1199 176 60 0 chr5 0 233 -199629917 + HERVH LTR ERV1 4903 5149 -2564 1313 111 18 5 chr5 234 451 -199629699 + HERVH LTR ERV1 5600 5819 -1894 * 2307 79 45 13 chr5 449 829 -199629321 + HERVH LTR ERV1 7322 7713 0 1625 148 120 68 chr5 829 1255 -199628895 + LTR7 LTR ERV1 1 448 -2 7434 180 20 10 chr5 1255 2679 -199627471 + MSTB-int LTR MaLR 214 1651 0 2601 157 7 25 chr5 2679 3113 -199627037 + MSTB LTR MaLR 1 426 0 213 222 0 0 chr5 4498 4561 -199625589 + (TG)n Simple_repeat Simple_repeat 2 64 0 4557 174 49 118 chr5 5185 5899 -199624251 + L1PB4 LINE L1 3517 4278 -1878 1822 144 32 32 chr5 5899 6245 -199623905 - THE1B LTR MaLR -18 346 1 4557 174 49 118 chr5 6245 8048 -199622102 + L1PB4 LINE L1 4278 6149 -7 324 333 42 30 chr5 8050 8218 -199621932 - L1MEc LINE L1 -4913 1483 1314 480 239 65 0 chr5 8219 8374 -199621776 + L1MEc LINE L1 735 899 -5497 982 251 29 57 chr5 8434 8945 -199621205 + L1MEc LINE L1 1003 1499 -4897 750 330 76 72 chr5 8959 9619 -199620531 - L1MEc LINE L1 -3385 2830 1334 295 222 0 0 chr5 9619 9682 -199620468 + MSTA LTR MaLR 366 428 0 5448 174 15 1 chr5 9682 10684 -199619466 + MSTA-int LTR MaLR 1 1016 -635 201 358 138 0 chr5 13608 13731 -199616419 - L2 LINE L2 -76 3237 3098 318 323 72 44 chr5 13981 14232 -199615918 + HAL1 LINE L1 1530 1787 -720 415 284 145 39 chr5 20274 20427 -199609723 + MLT1C LTR MaLR 47 182 -285 974 265 132 9 chr5 20427 20752 -199609398 + MLT1A1 LTR MaLR 1 365 0 415 284 145 39 chr5 20752 20936 -199609214 + MLT1C LTR MaLR 182 420 -47 706 310 102 16 chr5 21294 21949 -199608201 + L1ME LINE L1 5032 5737 -427 380 217 46 53 chr5 23827 23979 -199606171 + MER20 DNA MER1_type 6 156 -63 7403 119 101 103 chr5 25989 27689 -199602461 - pTR5 LTR ERV1 0 2438 742 529 335 108 40 chr5 27898 28379 -199601771 - L1MC5 LINE L1 -54 7907 7394 1041 254 38 42 chr5 28387 28493 -199601657 - L1M4 LINE L1 -2627 3519 3414 2095 131 0 10 chr5 28493 28805 -199601345 - AluSg SINE Alu -1 309 1 1041 254 38 42 chr5 28805 29221 -199600929 - L1M4 LINE L1 -2732 3414 2999 764 269 36 49 chr5 31317 31693 -199598457 - MLT1B LTR MaLR -12 378 1 207 284 45 23 chr5 35476 35652 -199594498 + (GGCTG)n Simple_repeat Simple_repeat 1 180 0 221 298 32 13 chr5 39932 40041 -199590109 + MIR SINE MIR 80 151 -57 279 264 0 66 chr5 40302 40423 -199589727 + C-rich Low_complexity Low_complexity 4 116 0 363 246 29 51 chr5 40442 40617 -199589533 + C-rich Low_complexity Low_complexity 5 175 0 285 274 102 15 chr5 41300 41497 -199588653 + MLT1D LTR MaLR 33 246 -259 411 297 76 68 chr5 43643 43906 -199586244 + L1ME LINE L1 674 938 -5181 186 385 33 16 chr5 44510 44632 -199585518 + L2 LINE L2 3148 3271 -1 235 214 0 0 chr5 46831 46887 -199583263 + (TG)n Simple_repeat Simple_repeat 1 56 0 1889 166 13 0 chr5 46999 47300 -199582850 - AluSx SINE Alu -7 305 1 2339 292 76 60 chr5 47350 49109 -199581041 + L1ME LINE L1 3397 5183 -946 826 203 102 0 chr5 49111 49308 -199580842 - Tigger1 DNA MER2_type 0 2418 2202 764 183 14 0 chr5 49306 49448 -199580702 - Tigger1 DNA MER2_type -2269 149 6 * 320 314 66 8 chr5 49459 49580 -199580570 + L1ME LINE L1 5186 5313 -816 204 146 24 0 chr5 49546 49587 -199580563 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 * 518 186 144 8 chr5 49611 49729 -199580421 + AluJo SINE Alu 1 134 -178 1173 229 27 53 chr5 49742 50117 -199580033 + L1ME LINE L1 5296 5660 -489 2138 100 7 32 chr5 51279 51588 -199578562 - AluY SINE Alu -5 306 6 12050 209 31 12 chr5 51611 52469 -199577681 - L1PB1 LINE L1 0 6867 6027 243 0 0 0 chr5 52469 52496 -199577654 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 1819 163 3 3 chr5 52496 52772 -199577378 - AluSx SINE Alu -32 280 5 12050 209 31 12 chr5 52772 57568 -199572582 - L1PB1 LINE L1 -839 6028 1109 801 220 11 0 chr5 57571 57748 -199572402 - L1PB1 LINE L1 -6679 184 6 279 273 31 8 chr5 58579 58707 -199571443 + (TG)n Simple_repeat Simple_repeat 2 132 0 1261 211 0 84 chr5 58822 59145 -199571005 - AluJo SINE Alu -16 296 1 1285 260 57 44 chr5 59850 60512 -199569638 + L1ME LINE L1 4798 5479 -687 621 175 0 44 chr5 60512 60649 -199569501 + FLAM_C SINE Alu 3 133 0 1285 260 57 44 chr5 60649 60853 -199569297 + L1ME LINE L1 5479 5679 -487 1965 189 8 3 chr5 60865 61245 -199568905 - MLT1B LTR MaLR -8 382 1 234 250 0 0 chr5 62310 62374 -199567776 + (CA)n Simple_repeat Simple_repeat 1 64 0 1655 198 31 0 chr5 62863 63151 -199566999 - AluJb SINE Alu -15 297 1 415 332 87 39 chr5 63244 63855 -199566295 - L1MC4a LINE L1 -646 5520 5258 552 329 124 45 chr5 63859 64415 -199565735 - L1MC4a LINE L1 -897 5249 4650 207 273 23 30 chr5 67083 67215 -199562935 + (CA)n Simple_repeat Simple_repeat 1 131 0 195 400 9 0 chr5 68924 69034 -199561116 + L2 LINE L2 3145 3255 -17 188 402 51 8 chr5 69145 69262 -199560888 + L3b LINE CR1 1455 1576 -7 2272 85 0 69 chr5 69494 69812 -199560338 - AluSx SINE Alu -16 296 1 950 82 48 0 chr5 71802 71948 -199558202 - MER41A LTR ERV1 0 554 402 281 263 46 72 chr5 72416 72568 -199557582 - L1M4 LINE L1 -1201 4945 4798 1607 199 3 10 chr5 73289 73590 -199556560 + AluJo SINE Alu 1 299 -13 204 240 27 13 chr5 73712 73787 -199556363 + (CA)n Simple_repeat Simple_repeat 1 76 0 575 208 38 50 chr5 74880 75039 -199555111 + L1ME LINE L1 5523 5679 -487 2009 184 8 3 chr5 75051 75431 -199554719 - MLT1B LTR MaLR -8 382 1 708 209 41 0 chr5 75806 75978 -199554172 - L1PBa LINE L1 -6679 184 6 332 327 92 52 chr5 76398 76780 -199553370 - L1M4 LINE L1 -1128 5018 4622 32 0 0 0 chr5 79098 79130 -199551020 + GC_rich Low_complexity Low_complexity 1 32 0 621 175 0 44 chr5 81432 81569 -199548581 - FLAM_C SINE Alu 0 133 3 896 289 65 20 chr5 81570 82233 -199547917 - L1ME LINE L1 -675 5491 4796 1464 228 3 10 chr5 82938 83236 -199546914 + AluJo SINE Alu 1 296 -16 300 257 29 0 chr5 83351 83456 -199546694 + (CA)n Simple_repeat Simple_repeat 2 109 0 25 0 0 0 chr5 83522 83547 -199546603 + AT_rich Low_complexity Low_complexity 1 25 0 5375 165 20 35 chr5 84014 84965 -199545185 + L1PB1 LINE L1 4362 5285 -866 1836 160 3 3 chr5 84965 85273 -199544877 + AluSx SINE Alu 5 312 0 5375 165 20 35 chr5 85273 86128 -199544022 + L1PB1 LINE L1 5285 6151 0 2216 100 3 29 chr5 86151 86460 -199543690 + AluY SINE Alu 6 306 -5 319 303 197 16 chr5 86658 86912 -199543238 + L1ME LINE L1 5335 5634 -536 1181 204 23 80 chr5 87624 88011 -199542139 - L1ME LINE L1 -489 5677 5313 488 197 145 8 chr5 88024 88141 -199542009 - AluJo SINE Alu -178 134 2 783 180 6 25 chr5 88301 88462 -199541688 + Tigger1 DNA MER2_type 6 163 -2255 * 793 181 124 0 chr5 88443 88636 -199541514 + Tigger1 DNA MER2_type 2202 2418 0 2332 287 78 66 chr5 88638 90403 -199539747 - L1ME LINE L1 -946 5200 3414 1501 183 10 36 chr5 90455 90756 -199539394 + AluSx SINE Alu 1 293 -19 26 0 0 0 chr5 91318 91344 -199538806 + GC_rich Low_complexity Low_complexity 1 26 0 197 290 29 0 chr5 92056 92125 -199538025 - MIR SINE MIR -57 151 81 208 277 45 28 chr5 96465 96642 -199533508 + (CAGCC)n Simple_repeat Simple_repeat 1 180 0 723 265 49 48 chr5 100425 100801 -199529349 + MLT1B LTR MaLR 1 378 -12 392 238 8 0 chr5 106450 106576 -199523574 + (TGGA)n Simple_repeat Simple_repeat 4 130 0 373 260 6 6 chr5 107523 107700 -199522450 + (TG)n Simple_repeat Simple_repeat 1 177 0 289 264 0 0 chr5 107715 107836 -199522314 + (TG)n Simple_repeat Simple_repeat 1 121 0 327 292 136 30 chr5 110056 110292 -199519858 + L1M4 LINE L1 2 262 -6280 1349 269 114 8 chr5 110365 110893 -199519257 + L1M4 LINE L1 3754 4337 -2307 423 262 47 75 chr5 111423 111637 -199518513 + L1M4 LINE L1 5604 5811 -833 353 241 17 26 chr5 111758 111874 -199518276 - L1M4 LINE L1 -1465 4681 4567 372 350 55 12 chr5 111880 112043 -199518107 + L1M4 LINE L1 1720 1889 -4755 357 223 39 39 chr5 113916 114019 -199516131 + MER91C DNA MER1_type 20 122 -18 279 247 32 21 chr5 115100 115193 -199514957 + (TCCA)n Simple_repeat Simple_repeat 1 94 0 233 250 147 26 chr5 115425 115541 -199514609 - L2 LINE L2 -277 3036 2907 202 301 108 0 chr5 115683 115776 -199514374 - L2 LINE L2 -738 2576 2474 313 190 51 0 chr5 116164 116243 -199513907 - LTR50 LTR ERVL -2 793 711 261 175 16 0 chr5 116367 116430 -199513720 - LTR50 LTR ERVL -277 518 455 338 276 23 49 chr5 116557 116865 -199513285 - L1MCa LINE L1 -4727 1699 1400 * 4013 119 52 7 chr5 116843 117971 -199512179 - L1PBa LINE L1 -4940 1923 595 239 219 14 55 chr5 118403 118476 -199511674 - L1MCa LINE L1 -5954 898 829 2273 116 7 0 chr5 118560 118863 -199511287 + AluSx SINE Alu 1 305 -7 731 291 108 6 chr5 119433 119756 -199510394 - MLT1C LTR MaLR -7 460 105 1069 285 74 19 chr5 119857 120618 -199509532 + L1M4 LINE L1 2253 3053 -3591 1093 198 142 20 chr5 120622 120966 -199509184 - MLT1B LTR MaLR -4 386 1 4005 255 106 37 chr5 120966 122607 -199507543 + L1M4 LINE L1 3049 4803 -1841 4786 175 29 32 chr5 122727 123703 -199506447 + MSTB-int LTR MaLR 679 1651 0 2654 167 5 16 chr5 123703 124134 -199506016 + MSTB LTR MaLR 1 426 0 2209 92 0 3 chr5 125450 125734 -199504416 + AluY SINE Alu 1 283 -28 867 306 102 23 chr5 125767 126685 -199503465 - L1MEd LINE L1 -4873 1246 321 1937 188 37 37 chr5 127565 127997 -199502153 + MSTB1 LTR MaLR 1 432 0 266 188 47 31 chr5 129792 129856 -199500294 + MIR SINE MIR 77 141 -67 1152 69 0 0 chr5 131217 131348 -199498802 + AluY SINE Alu 1 131 -180 297 0 0 0 chr5 131351 131384 -199498766 + (A)n Simple_repeat Simple_repeat 1 33 0 1271 141 0 0 chr5 131384 131569 -199498581 + AluY SINE Alu 119 303 -8 2085 248 49 24 chr5 131873 132611 -199497539 + L1M4 LINE L1 816 1571 -4971 1259 191 4 4 chr5 132611 132846 -199497304 + Tigger7 DNA MER2_type 1 235 -315 630 178 0 0 chr5 132844 132945 -199497205 + Tigger7 DNA MER2_type 2381 2481 -6 * 2202 222 27 24 chr5 132959 133685 -199496465 + L1M4 LINE L1 1570 2390 -4256 1228 223 28 14 chr5 133685 133972 -199496178 + AluJo SINE Alu 1 291 -21 2202 222 27 24 chr5 133972 133993 -199496157 + L1M4 LINE L1 2390 2409 -4237 1995 181 37 37 chr5 134558 134990 -199495160 + MSTB1 LTR MaLR 1 432 0 254 211 60 0 chr5 136784 136857 -199493293 + MIR SINE MIR 76 135 -73 2291 96 0 69 chr5 138206 138540 -199491610 + AluY SINE Alu 1 311 0 2068 243 54 27 chr5 138835 139571 -199490579 + L1ME4a LINE L1 816 1571 -4971 1239 182 22 4 chr5 139571 139802 -199490348 + Tigger7 DNA MER2_type 1 235 -315 636 178 0 0 chr5 139800 139901 -199490249 + Tigger7 DNA MER2_type 2381 2481 -6 * 2246 229 30 43 chr5 139915 140643 -199489507 + L1ME4a LINE L1 1570 2369 -4277 1573 194 32 7 chr5 140643 140927 -199489223 + AluJo SINE Alu 1 291 -21 2246 229 30 43 chr5 140927 141262 -199488888 + L1ME4a LINE L1 2369 2707 -3939 879 305 103 17 chr5 141620 142688 -199487462 + L1ME4a LINE L1 5222 6383 -285 214 289 72 59 chr5 143151 143303 -199486847 - MIR SINE MIR -81 181 28 1147 135 12 0 chr5 144015 144185 -199485965 - AluSg/x SINE Alu -7 303 132 1968 88 11 4 chr5 144185 144448 -199485702 - AluY SINE Alu -14 297 33 303 28 0 0 chr5 144468 144504 -199485646 + (CA)n Simple_repeat Simple_repeat 2 37 0 497 256 56 32 chr5 144818 145068 -199485082 + MLT1A1 LTR MaLR 19 274 -91 * 735 197 48 16 chr5 145065 145253 -199484897 + MLT1A2 LTR MaLR 181 374 0 327 295 103 58 chr5 146385 146609 -199483541 + L1ME4a LINE L1 6364 6597 -22 859 312 114 65 chr5 147171 147829 -199482321 + L1MC1 LINE L1 4560 5249 -897 366 339 60 35 chr5 147833 148487 -199481663 + L1MC1 LINE L1 5258 5976 -357 1660 193 30 0 chr5 148537 148833 -199481317 + AluJb SINE Alu 1 305 -7 248 234 0 0 chr5 149320 149384 -199480766 + (TG)n Simple_repeat Simple_repeat 1 64 0 2113 179 16 5 chr5 150447 150833 -199479317 + MLT1B LTR MaLR 1 390 0 790 236 19 28 chr5 150837 151053 -199479097 - L1ME LINE L1 -487 5662 5449 266 248 0 16 chr5 151054 151149 -199479001 - L1ME LINE L1 -483 5664 5574 760 333 62 19 chr5 151307 151841 -199478309 - L1ME LINE L1 -2176 3953 3397 1895 165 14 0 chr5 151891 152188 -199477962 + AluSx SINE Alu 1 301 -11 235 214 0 0 chr5 152300 152356 -199477794 + (CA)n Simple_repeat Simple_repeat 1 56 0 186 385 33 16 chr5 154465 154587 -199475563 - L2 LINE L2 -1 3271 3148 414 271 80 69 chr5 155191 155453 -199474697 - L1ME LINE L1 -5181 938 674 252 274 107 20 chr5 157974 158171 -199471979 - MLT1D LTR MaLR -259 246 33 394 139 0 64 chr5 159382 159555 -199470595 + (TG)n Simple_repeat Simple_repeat 1 162 0 389 230 0 58 chr5 159572 159763 -199470387 + (TG)n Simple_repeat Simple_repeat 1 180 0 298 184 8 32 chr5 159776 159901 -199470249 + (TG)n Simple_repeat Simple_repeat 1 122 0 378 306 39 63 chr5 160141 160501 -199469649 - L1M4c LINE L1 -4982 1402 1052 2106 114 10 0 chr5 160501 160798 -199469352 + AluSx SINE Alu 1 300 -12 378 306 39 63 chr5 160798 160852 -199469298 - L1M4c LINE L1 -5332 1052 998 721 301 78 19 chr5 161118 161590 -199468560 - L1ME LINE L1 -746 5383 4884 1113 272 111 37 chr5 161691 162582 -199467568 - L1ME LINE L1 -1460 4669 3713 475 313 37 0 chr5 162612 162746 -199467404 + MIR SINE MIR 112 250 -12 339 340 14 0 chr5 162848 162989 -199467161 - L1ME LINE L1 -2506 3623 3481 281 294 9 0 chr5 163368 163477 -199466673 - L1ME LINE L1 -2676 3453 3344 331 320 119 48 chr5 163860 164076 -199466074 - L1ME LINE L1 -5076 1043 793 2659 42 0 0 chr5 164076 164387 -199465763 - AluY SINE Alu 0 311 1 331 320 119 48 chr5 164387 164507 -199465643 - L1ME LINE L1 -5326 793 683 279 283 81 0 chr5 164817 164965 -199465185 - L1MDa LINE L1 -4548 1992 1841 225 0 0 0 chr5 165624 165649 -199464501 + (TA)n Simple_repeat Simple_repeat 2 26 0 214 260 26 13 chr5 171305 171382 -199458768 + C-rich Low_complexity Low_complexity 4 81 0 1631 266 90 26 chr5 172526 173244 -199456906 + L1ME LINE L1 4661 5425 -756 382 335 137 13 chr5 173562 173875 -199456275 + L1ME LINE L1 5404 5755 -411 215 269 20 60 chr5 180367 180516 -199449634 + (CAGTG)n Simple_repeat Simple_repeat 1 143 0 * 235 259 29 69 chr5 180463 180637 -199449513 + (CGGTG)n Simple_repeat Simple_repeat 3 169 0 305 278 0 22 chr5 181867 182138 -199448012 + (CA)n Simple_repeat Simple_repeat 1 265 0 322 339 76 38 chr5 185352 185641 -199444509 + HAL1 LINE L1 1530 1829 -678 305 273 204 24 chr5 191930 192099 -199438051 + MLT1C LTR MaLR 25 162 -305 1005 259 132 9 chr5 192099 192424 -199437726 + MLT1A1 LTR MaLR 1 365 0 305 273 204 24 chr5 192424 192608 -199437542 + MLT1C LTR MaLR 162 420 -47 694 311 102 16 chr5 192966 193621 -199436529 + L1ME LINE L1 5032 5737 -427 25 31 0 0 chr5 198967 198999 -199431151 + GC_rich Low_complexity Low_complexity 1 32 0 192 61 20 61 chr5 199107 199156 -199430994 + (CCCCG)n Simple_repeat Simple_repeat 3 49 0 427 245 49 120 chr5 201175 201565 -199428585 - MLT1C LTR MaLR -7 383 15 414 296 0 0 chr5 202402 202742 -199427408 + (TG)n Simple_repeat Simple_repeat 1 340 0 3538 169 35 1 chr5 203403 204112 -199426038 + L1PB4 LINE L1 3517 4249 -1897 1797 147 32 32 chr5 204117 204463 -199425687 - THE1B LTR MaLR -18 346 1 4463 172 56 2 chr5 204464 206280 -199423870 + L1PB4 LINE L1 4246 6149 -7 462 235 85 0 chr5 206451 206604 -199423546 + L1MEc LINE L1 735 900 -5496 984 236 31 64 chr5 206662 207175 -199422975 + L1MEc LINE L1 1002 1497 -4899 771 335 83 76 chr5 207179 207886 -199422264 - L1MDa LINE L1 -3374 3166 1600 270 122 0 0 chr5 207890 207931 -199422219 + MSTA LTR MaLR 379 419 -9 1161 157 19 0 chr5 207940 208156 -199421994 + MSTA-int LTR MaLR 1 220 -1431 1568 146 114 74 chr5 208156 208587 -199421563 + LTR7 LTR ERV1 1 448 -2 834 152 26 26 chr5 208591 208822 -199421328 + HERVH LTR ERV1 2 232 -7481 778 205 80 0 chr5 208955 209179 -199420971 - L1MEc LINE L1 -4260 2136 1895 468 255 20 7 chr5 209223 209376 -199420774 - L1MEc LINE L1 -6205 191 37 2359 84 0 0 chr5 209384 209682 -199420468 - AluY SINE Alu -13 298 1 227 229 71 64 chr5 209723 209863 -199420287 - HAL1b LINE L1 -13 1335 1195 234 258 174 23 chr5 210749 210881 -199419269 + L2 LINE L2 2963 3114 -158 2008 125 17 0 chr5 212743 213030 -199417120 + AluSq SINE Alu 4 295 -18 4422 115 63 9 chr5 213112 213765 -199416385 - LTR12 LTR ERV1 0 688 1 603 195 13 6 chr5 214678 214837 -199415313 + (TGGA)n Simple_repeat Simple_repeat 3 162 0 254 250 0 0 chr5 216275 216327 -199413823 + LTR30 LTR ERV1 1 52 -670 1067 130 140 23 chr5 216327 216581 -199413569 + LTR12 LTR ERV1 55 2032 -406 280 227 0 0 chr5 216582 216657 -199413493 + LTR30 LTR ERV1 553 627 -95 742 112 26 0 chr5 216657 216773 -199413377 + LTR12 LTR ERV1 362 480 -234 387 335 94 12 chr5 221023 221193 -199408957 + L1MC4 LINE L1 6459 6642 -1400 862 261 109 7 chr5 221200 221503 -199408647 - MER2 DNA MER2_type -8 337 4 653 251 32 58 chr5 222003 222099 -199408051 + L1MEc LINE L1 2125 2222 -4174 2262 100 0 3 chr5 222099 222398 -199407752 - AluSx SINE Alu -14 298 1 653 251 32 58 chr5 222398 222643 -199407507 + L1MEc LINE L1 2222 2457 -3939 * 1309 223 45 16 chr5 222640 223067 -199407083 + L1ME1 LINE L1 5723 6161 -5 2033 140 3 9 chr5 223253 223568 -199406582 + AluSq SINE Alu 1 313 0 29 60 0 0 chr5 226485 226535 -199403615 + GC_rich Low_complexity Low_complexity 1 50 0 22 99 0 0 chr5 226702 226773 -199403377 + GC_rich Low_complexity Low_complexity 1 71 0 21 0 0 0 chr5 226998 227019 -199403131 + GC_rich Low_complexity Low_complexity 1 21 0 2199 68 72 0 chr5 228244 228536 -199401614 - AluSp SINE Alu 0 313 1 254 234 54 72 chr5 232822 232933 -199397217 + L2 LINE L2 3205 3313 0 1026 135 3 22 chr5 232936 233303 -199396847 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 891 187 5 18 chr5 233315 233754 -199396396 + (TGGA)n Simple_repeat Simple_repeat 1 433 0 290 336 0 10 chr5 233854 233958 -199396192 + (TGGG)n Simple_repeat Simple_repeat 1 103 0 387 312 89 7 chr5 233960 234144 -199396006 + MIR SINE MIR 3 200 -62 929 222 0 0 chr5 234437 234613 -199395537 + AluJb SINE Alu 136 311 -1 450 214 21 7 chr5 234627 234767 -199395383 + GA-rich Low_complexity Low_complexity 1 142 0 562 161 193 6 chr5 235849 236010 -199394140 - L1MC2 LINE L1 0 6344 6154 186 276 60 75 chr5 236659 236793 -199393357 + L3 LINE CR1 517 648 -929 1123 250 118 53 chr5 237835 238343 -199391807 - MLT1F LTR MaLR 0 542 2 2785 100 11 0 chr5 238374 238745 -199391405 - THE1C LTR MaLR 0 375 1 272 361 53 34 chr5 238756 238974 -199391176 - MIR3 SINE MIR -10 252 30 1138 248 42 121 chr5 242633 243509 -199386641 + L1M4 LINE L1 2755 3561 -2585 321 304 14 16 chr5 243532 243699 -199386451 - L1 LINE L1 -1722 4424 4260 841 156 13 26 chr5 243979 244133 -199386017 - AluJo SINE Alu -131 181 30 202 213 38 50 chr5 244320 244400 -199385750 + (CGGGG)n Simple_repeat Simple_repeat 1 79 0 28 0 0 0 chr5 244458 244486 -199385664 + GC_rich Low_complexity Low_complexity 1 28 0 230 279 243 29 chr5 246145 246281 -199383869 - MIR3 SINE MIR -26 182 18 197 211 19 0 chr5 246915 246967 -199383183 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 2208 92 0 3 chr5 247305 247598 -199382552 + AluSc SINE Alu 1 292 -17 1906 154 0 22 chr5 247607 247926 -199382224 + AluJb SINE Alu 1 312 0 238 297 55 0 chr5 249090 249181 -199380969 + MER5A DNA MER1_type 14 109 -80 1983 96 17 7 chr5 250907 251200 -199378950 + AluY SINE Alu 1 296 -15 265 208 49 87 chr5 252526 252709 -199377441 + (CATCC)n Simple_repeat Simple_repeat 1 176 0 320 291 36 0 chr5 256765 256875 -199373275 + MIR SINE MIR 38 151 -111 180 111 0 0 chr5 258061 258088 -199372062 + (TG)n Simple_repeat Simple_repeat 2 28 0 210 37 0 0 chr5 261311 261338 -199368812 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 347 250 56 12 chr5 262761 262941 -199367209 + L1MCa LINE L1 1690 1969 -4564 1604 88 22 9 chr5 263000 263227 -199366923 - MER30 DNA MER1_type 0 230 1 207 0 0 0 chr5 264016 264039 -199366111 + (CAA)n Simple_repeat Simple_repeat 2 24 0 241 202 147 9 chr5 264580 264689 -199365461 - L1MB8 LINE L1 -77 6101 5978 317 309 47 0 chr5 265549 265698 -199364452 + L1ME LINE L1 167 322 -5883 254 296 142 12 chr5 266102 266271 -199363879 + L1ME LINE L1 810 1000 -5396 541 231 54 51 chr5 266440 266700 -199363450 + MER4C LTR ERV1 275 683 -16 694 230 32 8 chr5 266742 266994 -199363156 + L1ME LINE L1 2788 3045 -3170 1739 133 158 142 chr5 266994 267718 -199362432 - LTR12 LTR ERV1 -133 2017 54 261 176 20 0 chr5 267718 267769 -199362381 - LTR30 LTR ERV1 -670 52 1 3492 257 79 19 chr5 267770 269313 -199360837 + L1ME LINE L1 3043 4677 -1538 279 304 0 10 chr5 269493 269595 -199360555 - MIR SINE MIR -72 136 36 4720 166 41 8 chr5 271544 272340 -199357810 - L1PA16 LINE L1 -9 6157 5298 2341 63 0 7 chr5 272340 272640 -199357510 - AluY SINE Alu -13 298 1 4720 166 41 8 chr5 272640 273153 -199356997 - L1PA16 LINE L1 -868 5298 4803 297 226 0 0 chr5 274987 275049 -199355101 - MLT1D LTR MaLR 0 505 444 245 195 57 98 chr5 275166 275289 -199354861 - MLT1D LTR MaLR -293 212 95 222 275 71 58 chr5 276690 276833 -199353317 - MIR SINE MIR -67 141 17 1068 178 32 9 chr5 277401 277620 -199352530 - MSTB LTR MaLR 0 426 203 1073 143 56 79 chr5 277985 278066 -199352084 - MSTB LTR MaLR -165 261 180 2251 99 0 10 chr5 278066 278368 -199351782 - AluSx SINE Alu -13 299 1 1073 143 56 79 chr5 278368 278552 -199351598 - MSTB LTR MaLR -246 180 2 384 271 6 41 chr5 280217 280387 -199349763 + (TG)n Simple_repeat Simple_repeat 1 164 0 298 224 40 0 chr5 281167 281243 -199348907 + G-rich Low_complexity Low_complexity 3 81 0 1736 229 53 28 chr5 286346 286875 -199343275 - MER6A DNA MER2_type -63 542 1 246 238 83 24 chr5 286943 287027 -199343123 + L1ME LINE L1 5340 5428 -807 237 274 27 0 chr5 287171 287244 -199342906 + L1ME LINE L1 5451 5525 -714 818 179 87 6 chr5 289054 289227 -199340923 - AluJo SINE Alu -10 302 116 247 316 155 0 chr5 290967 291122 -199339028 + MLT1E LTR MaLR 398 576 -17 400 335 103 49 chr5 292361 292906 -199337244 - L1MEc LINE L1 -2833 3549 944 1736 229 53 28 chr5 298040 298569 -199331581 - MER6A DNA MER2_type -63 542 1 246 238 83 24 chr5 298637 298721 -199331429 + L1ME LINE L1 5271 5359 -807 237 274 27 0 chr5 298865 298938 -199331212 + L1ME LINE L1 5382 5456 -706 818 179 87 6 chr5 300752 300925 -199329225 - AluJo SINE Alu -10 302 116 247 316 155 0 chr5 302816 302971 -199327179 + MLT1E LTR MaLR 398 576 -17 182 244 0 26 chr5 306554 306632 -199323518 + (CATA)n Simple_repeat Simple_repeat 3 78 0 2138 129 3 0 chr5 307137 307448 -199322702 - AluSx SINE Alu 0 312 1 397 279 41 0 chr5 307859 308006 -199322144 + MSTD LTR MaLR 1 153 -243 908 192 60 34 chr5 308147 308381 -199321769 + MSTD LTR MaLR 157 396 0 1269 123 5 0 chr5 308905 309092 -199321058 + AluSg/x SINE Alu 124 311 -1 475 254 58 5 chr5 309100 309289 -199320861 + L1M4 LINE L1 5132 5330 -816 343 288 136 30 chr5 314797 315033 -199315117 + L1M4 LINE L1 2 262 -6280 2407 276 83 17 chr5 315102 315631 -199314519 + L1M4 LINE L1 3754 4247 -2397 1627 168 24 30 chr5 315631 315929 -199314221 - AluJo SINE Alu -16 296 1 2407 276 83 17 chr5 315929 316386 -199313764 + L1M4 LINE L1 4247 4805 -1839 760 199 39 57 chr5 316421 316746 -199313404 + MLT1B LTR MaLR 21 337 -130 310 297 119 0 chr5 316965 317083 -199313067 + MER58B DNA MER1_type 210 341 0 2070 131 0 0 chr5 320392 320689 -199309461 + AluSx SINE Alu 1 297 -15 266 298 92 0 chr5 321297 321428 -199308722 - MIR SINE MIR -10 252 110 219 231 87 10 chr5 321865 321969 -199308181 - MIR SINE MIR -132 130 19 337 318 67 6 chr5 322622 322768 -199307382 - MIR SINE MIR -4 258 105 2146 175 107 5 chr5 323569 324009 -199306141 + MER31A LTR ERV1 1 485 0 1142 144 0 0 chr5 324575 324748 -199305402 - AluSg/x SINE Alu -6 304 132 677 87 77 29 chr5 324966 325070 -199305080 - AluSq/x SINE Alu -204 109 1 621 255 84 56 chr5 325109 325466 -199304684 + L1MDa LINE L1 20 386 -6154 196 77 51 0 chr5 325503 325542 -199304608 + (CA)n Simple_repeat Simple_repeat 1 41 0 333 0 0 0 chr5 325633 325670 -199304480 + (CA)n Simple_repeat Simple_repeat 1 37 0 1703 232 92 20 chr5 325866 327036 -199303114 + L1MDa LINE L1 1014 2098 -4442 2116 115 13 0 chr5 327036 327340 -199302810 + AluSq SINE Alu 3 310 -3 1703 232 92 20 chr5 327340 327806 -199302344 + L1MDa LINE L1 2098 3290 -3250 1094 74 0 4 chr5 327806 328021 -199302129 + AluY SINE Alu 1 302 -9 1143 223 67 5 chr5 328023 328413 -199301737 + L1MDa LINE L1 3282 3695 -2845 2027 191 57 17 chr5 328418 328798 -199301352 + LTR26 LTR ERV1 9 452 -151 2186 86 17 7 chr5 328798 329088 -199301062 + AluSx SINE Alu 1 293 -19 2027 191 57 17 chr5 329088 329247 -199300903 + LTR26 LTR ERV1 452 603 0 456 332 58 8 chr5 329260 329640 -199300510 + L1MDa LINE L1 3715 4113 -2427 635 320 59 69 chr5 330267 330658 -199299492 - L1MDa LINE L1 -4554 1986 1600 289 114 0 0 chr5 330660 330704 -199299446 + MSTA LTR MaLR 376 419 -9 1161 157 19 0 chr5 330713 330929 -199299221 + MSTA-int LTR MaLR 1 220 -1431 1621 144 114 74 chr5 330929 331360 -199298790 + LTR7 LTR ERV1 1 448 -2 15176 113 24 22 chr5 331362 334649 -199295501 + HERVH LTR ERV1 1 2987 -4726 715 182 20 0 chr5 334643 334791 -199295359 + HERVH LTR ERV1 3140 3290 -4423 * 3028 116 6 2 chr5 334790 335282 -199294868 + HERVH LTR ERV1 3500 3993 -3720 1470 123 4 48 chr5 335284 335552 -199294598 + HERVH LTR ERV1 4488 4743 -2970 1177 101 28 11 chr5 385558 385736 -199244414 + L1PA10 LINE L1 5978 6158 -10 2180 101 0 3 chr5 385791 386088 -199244062 + AluSg SINE Alu 1 296 -14 753 258 122 7 chr5 386304 386575 -199243575 + L1ME3A LINE L1 5584 5885 -285 205 178 0 0 chr5 386685 386730 -199243420 + A-rich Low_complexity Low_complexity 1 45 0 1971 101 39 3 chr5 386733 387019 -199243131 - AluSg SINE Alu -14 296 1 194 0 39 0 chr5 387378 387404 -199242746 + (TG)n Simple_repeat Simple_repeat 2 28 0 676 286 65 10 chr5 388067 388361 -199241789 - MER33 DNA MER1_type -8 316 7 653 306 8 35 chr5 389568 389823 -199240327 + L1MEd LINE L1 30 277 -5768 2917 250 82 14 chr5 389883 391276 -199238874 + L1MCb LINE L1 223 1689 -4854 2037 243 23 2 chr5 391276 391749 -199238401 + L1MC3 LINE L1 7302 7784 -1 22 0 0 0 chr5 391755 391777 -199238373 + AT_rich Low_complexity Low_complexity 1 22 0 263 329 0 0 chr5 392046 392125 -199238025 + MIR3 SINE MIR 110 188 -20 354 274 121 0 chr5 393334 393491 -199236659 + LTR52 LTR ERVL 167 342 -79 246 359 23 8 chr5 393729 393857 -199236293 + MIR3 SINE MIR 71 200 -8 556 271 39 0 chr5 396070 396225 -199233925 + MER69 DNA AcHobo 72 232 -2294 287 261 49 28 chr5 397764 397906 -199232244 + L1MEd LINE L1 438 582 -5972 943 292 124 71 chr5 397976 399035 -199231115 + L1MEd LINE L1 715 1846 -4718 2479 37 3 0 chr5 399035 399331 -199230819 - AluY SINE Alu -14 297 1 943 292 124 71 chr5 399331 399605 -199230545 + L1MEd LINE L1 1846 2104 -4460 * 2942 104 21 0 chr5 399604 400327 -199229823 + L1P4 LINE L1 4917 5652 -516 300 263 46 72 chr5 401433 401585 -199228565 - L1M4 LINE L1 -1201 4945 4798 1505 199 3 10 chr5 402307 402608 -199227542 + AluJo SINE Alu 1 299 -13 257 275 22 0 chr5 402728 402819 -199227331 + (CA)n Simple_repeat Simple_repeat 2 94 0 371 332 89 52 chr5 404457 404840 -199225310 + L1ME LINE L1 4622 5018 -1128 735 209 41 0 chr5 405258 405430 -199224720 + L1PBa LINE L1 6 184 -6679 2158 178 10 5 chr5 405805 406193 -199223957 + MLT1B LTR MaLR 1 390 0 1339 258 56 43 chr5 406197 406401 -199223749 - L1ME LINE L1 -487 5679 5479 675 175 0 44 chr5 406401 406538 -199223612 - FLAM_C SINE Alu 0 133 3 1339 258 56 43 chr5 406538 407202 -199222948 - L1ME LINE L1 -687 5479 4796 1367 228 3 10 chr5 407907 408205 -199221945 + AluJo SINE Alu 1 296 -16 300 257 29 0 chr5 408320 408425 -199221725 + (CA)n Simple_repeat Simple_repeat 2 109 0 25 0 0 0 chr5 408491 408516 -199221634 + AT_rich Low_complexity Low_complexity 1 25 0 779 226 17 6 chr5 409287 409464 -199220686 + L1PB1 LINE L1 6 184 -6679 12006 186 30 17 chr5 409467 411469 -199218681 + L1PB1 LINE L1 1109 3083 -3784 5780 54 15 15 chr5 411469 412214 -199217936 - SVA Other Other 0 1386 642 12006 186 30 17 chr5 412214 415036 -199215114 + L1PB1 LINE L1 3083 6030 -837 1721 160 3 3 chr5 415036 415340 -199214810 + AluSx SINE Alu 5 312 0 12006 186 30 17 chr5 415340 416190 -199213960 + L1PB1 LINE L1 6030 6867 0 2057 104 3 29 chr5 416213 416522 -199213628 + AluY SINE Alu 6 306 -5 368 297 191 19 chr5 416720 416976 -199213174 + L1ME LINE L1 5335 5634 -536 1187 207 23 80 chr5 417688 418075 -199212075 - L1ME LINE L1 -489 5660 5296 532 197 145 8 chr5 418088 418205 -199211945 - AluJo SINE Alu -178 134 2 792 180 6 25 chr5 418365 418526 -199211624 + Tigger1 DNA MER2_type 6 163 -2255 * 819 190 113 0 chr5 418507 418702 -199211448 + Tigger1 DNA MER2_type 2202 2418 0 2602 290 78 62 chr5 418704 420461 -199209689 - L1ME LINE L1 -946 5183 3397 1871 162 14 0 chr5 420511 420808 -199209342 + AluSx SINE Alu 1 301 -11 235 214 0 0 chr5 420920 420976 -199209174 + (CA)n Simple_repeat Simple_repeat 1 56 0 182 385 33 16 chr5 423085 423207 -199206943 - L2 LINE L2 -1 3271 3148 364 272 83 67 chr5 423819 424073 -199206077 - L1ME LINE L1 -5188 931 674 304 274 107 20 chr5 426594 426791 -199203359 - MLT1D LTR MaLR -259 246 33 417 298 0 41 chr5 427483 427792 -199202358 + G-rich Low_complexity Low_complexity 1 296 0 206 290 29 0 chr5 428080 428149 -199202001 - MIR SINE MIR -57 151 81 295 263 34 0 chr5 432490 432608 -199197542 + (CAGCC)n Simple_repeat Simple_repeat 1 122 0 196 141 47 12 chr5 432636 432721 -199197429 + (CAGCC)n Simple_repeat Simple_repeat 4 91 0 2185 110 0 0 chr5 435506 435815 -199194335 + AluSx SINE Alu 1 309 -3 361 284 40 57 chr5 440811 440987 -199189163 - L1MEc LINE L1 -1871 4344 4172 1290 255 154 19 chr5 441041 442132 -199188018 - L1MEc LINE L1 -2932 3283 2058 481 205 150 0 chr5 442133 442260 -199187890 - MER3 DNA MER1_type 0 209 64 1055 256 59 20 chr5 442262 442808 -199187342 - L1MEc LINE L1 -5170 1226 660 279 299 52 0 chr5 442889 442986 -199187164 + MER58B DNA MER1_type 234 335 -6 1640 159 26 16 chr5 445547 445855 -199184295 - AluJo SINE Alu -1 311 1 1983 126 161 34 chr5 449012 449344 -199180806 + MSTA LTR MaLR 1 389 -39 2218 81 0 3 chr5 449344 449648 -199180502 + AluSq SINE Alu 1 303 0 1983 126 161 34 chr5 449648 449694 -199180456 + MSTA LTR MaLR 389 428 0 9946 134 9 40 chr5 449696 451324 -199178826 + MSTA-int LTR MaLR 3 1580 0 1132 152 140 16 chr5 451324 451581 -199178569 + MSTA LTR MaLR 1 289 -139 341 336 35 0 chr5 452029 452172 -199177978 - MER34 LTR ERV1 -39 503 356 1283 189 261 3 chr5 452176 452552 -199177598 + MER101 LTR ERV1 1 473 -1 461 235 53 8 chr5 452612 452744 -199177406 - MER34 LTR ERV1 -285 257 120 1751 148 195 11 chr5 454344 454703 -199175447 - MSTA LTR MaLR 0 428 4 8648 130 18 52 chr5 454711 455918 -199174232 - MSTA-int LTR MaLR -5 1575 436 1899 145 9 28 chr5 455918 456236 -199173914 + AluSx SINE Alu 1 312 0 8648 130 18 52 chr5 456236 456656 -199173494 - MSTA-int LTR MaLR -1144 436 3 1676 154 222 3 chr5 456658 457009 -199173141 - MSTA LTR MaLR 0 428 1 2026 119 7 0 chr5 458960 459254 -199170896 + AluSx SINE Alu 1 296 -16 424 337 137 4 chr5 459729 459978 -199170172 - L1M4 LINE L1 -3063 3083 2802 229 319 36 0 chr5 459980 460118 -199170032 - L1MC4 LINE L1 -937 7105 6963 429 180 79 29 chr5 460190 460329 -199169821 - L1ME3A LINE L1 -5 6165 6020 831 227 122 18 chr5 460356 460691 -199169459 - MLT1B LTR MaLR 0 390 21 356 114 102 24 chr5 460946 461112 -199169038 + (CA)n Simple_repeat Simple_repeat 1 179 0 * 394 173 48 30 chr5 461017 461185 -199168965 + (CACAA)n Simple_repeat Simple_repeat 1 171 0 * 428 139 32 86 chr5 461061 461292 -199168858 + (CACAC)n Simple_repeat Simple_repeat 1 218 0 241 120 48 60 chr5 461402 461569 -199168581 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 229 134 79 8 chr5 461607 461734 -199168416 + (CA)n Simple_repeat Simple_repeat 1 136 0 711 264 58 55 chr5 465148 465496 -199164654 - MLT1A1 LTR MaLR -1 364 16 325 291 28 22 chr5 465546 465725 -199164425 + (CA)n Simple_repeat Simple_repeat 1 180 0 251 213 8 63 chr5 465666 465793 -199164357 + C-rich Low_complexity Low_complexity 3 122 0 * 517 199 140 23 chr5 467272 467443 -199162707 - MSTB2 LTR MaLR -13 444 229 21 36 0 0 chr5 469059 469087 -199161063 + AT_rich Low_complexity Low_complexity 1 28 0 403 359 122 17 chr5 470830 471067 -199159083 + L1MEc LINE L1 848 1109 -5454 7613 140 45 44 chr5 471075 472593 -199157557 + MSTA-int LTR MaLR 61 1580 0 2003 150 145 18 chr5 472593 472973 -199157177 + MSTA LTR MaLR 1 428 0 761 247 148 3 chr5 473187 473470 -199156680 + MER68 LTR ERV1 164 487 -75 953 255 116 23 chr5 473589 473760 -199156390 - MER21B LTR ERV1 -191 672 518 4829 176 39 14 chr5 473760 474641 -199155509 + MER4D LTR ERV1 1 903 0 953 255 116 23 chr5 474641 474857 -199155293 - MER21B LTR ERV1 -345 518 249 535 208 69 0 chr5 474857 474987 -199155163 - MER21B LTR ERV1 -705 158 20 3524 153 27 73 chr5 477312 477549 -199152601 + LTR39 LTR ERV1 16 262 -521 1955 129 0 7 chr5 477549 477836 -199152314 + AluSx SINE Alu 28 312 0 3524 153 27 73 chr5 477836 478403 -199151747 + LTR39 LTR ERV1 262 783 0 820 170 78 0 chr5 478747 478900 -199151250 - AluJb SINE Alu -12 300 136 426 283 104 0 chr5 478901 479152 -199150998 - MER33 DNA MER1_type -44 280 4 486 319 76 34 chr5 479217 479480 -199150670 + L1MEc LINE L1 1040 1313 -5250 288 281 102 15 chr5 479557 479760 -199150390 + L1MEc LINE L1 1271 1592 -4790 502 307 49 0 chr5 479776 479939 -199150211 - MER58C DNA MER1_type -18 197 27 2275 81 3 3 chr5 479989 480286 -199149864 - AluY SINE Alu -14 297 1 391 309 42 13 chr5 480325 480561 -199149589 + L1MEc LINE L1 1731 1973 -4590 1086 186 85 80 chr5 482322 482699 -199147451 + MLT1B LTR MaLR 1 379 -11 380 217 46 53 chr5 483514 483666 -199146484 - MER20 DNA MER1_type -63 156 6 360 228 22 11 chr5 486739 486831 -199143319 + L1MC4a LINE L1 6678 6770 -1038 418 322 65 0 chr5 487869 488068 -199142082 + Charlie5 DNA MER1_type 2366 2577 -35 239 310 100 0 chr5 490233 490333 -199139817 + Tigger5 DNA MER2_type 98 207 -2116 879 141 49 22 chr5 494669 494854 -199135296 + AluJo SINE Alu 115 304 -8 496 216 105 26 chr5 495422 495575 -199134575 - MER58C DNA MER1_type -3 212 48 200 35 35 0 chr5 496327 496356 -199133794 + (TTC)n Simple_repeat Simple_repeat 2 31 0 25 31 0 0 chr5 497297 497329 -199132821 + GC_rich Low_complexity Low_complexity 1 32 0 524 336 66 20 chr5 499087 499331 -199130819 - MIR SINE MIR 0 262 8 242 299 26 0 chr5 499883 499960 -199130190 - L2 LINE L2 0 3313 3235 250 288 38 23 chr5 500468 500600 -199129550 + L1M1 LINE L1 5695 5828 -476 1459 194 13 22 chr5 500671 500985 -199129165 + AluJo SINE Alu 1 311 -1 2244 78 6 34 chr5 505053 505374 -199124776 - AluSx SINE Alu 0 312 1 546 147 69 17 chr5 505417 505533 -199124617 - Tigger7 DNA MER2_type -21 2470 2349 192 40 0 0 chr5 505634 505659 -199124491 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 8641 38 13 0 chr5 506037 507031 -199123119 - LTR13 LTR ERVK 0 1007 1 375 250 109 26 chr5 507768 507937 -199122213 - L1MEc LINE L1 -3309 2906 2723 1769 316 88 28 chr5 507988 509222 -199120928 - L1MEc LINE L1 -5056 1340 32 1252 167 115 15 chr5 509390 509659 -199120491 + AluJb SINE Alu 7 302 -10 2379 69 0 13 chr5 512128 512433 -199117717 + AluY SINE Alu 1 301 -10 3819 103 2 6 chr5 512987 513500 -199116650 - MER9 LTR ERVK 0 511 1 245 347 0 49 chr5 514520 514664 -199115486 - L2 LINE L2 -52 3261 3125 2448 53 0 0 chr5 514741 515042 -199115108 + AluY SINE Alu 1 301 -10 2014 129 7 3 chr5 516803 517105 -199113045 - AluSx SINE Alu -7 305 3 180 167 0 71 chr5 517503 517545 -199112605 + MIR SINE MIR 34 72 -136 201 74 0 0 chr5 518172 518199 -199111951 + (TG)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr5 521315 521338 -199108812 + AT_rich Low_complexity Low_complexity 1 23 0 3499 57 16 11 chr5 522028 522470 -199107680 - MLT2A1 LTR ERVL 0 444 1 319 296 45 62 chr5 523224 523400 -199106750 - L1M4 LINE L1 -1871 4275 4103 530 290 163 23 chr5 523420 523727 -199106423 - L1M4 LINE L1 -2885 3261 2912 1988 126 161 34 chr5 524377 524709 -199105441 + MSTA LTR MaLR 1 389 -39 2192 81 0 3 chr5 524709 525013 -199105137 + AluSq SINE Alu 1 303 0 1988 126 161 34 chr5 525013 525059 -199105091 + MSTA LTR MaLR 389 428 0 9889 133 9 41 chr5 525061 526691 -199103459 + MSTA-int LTR MaLR 3 1580 0 753 123 227 7 chr5 526691 526845 -199103305 + MSTA LTR MaLR 1 188 -240 196 141 47 12 chr5 528401 528486 -199101664 + (GGCTG)n Simple_repeat Simple_repeat 4 91 0 295 263 34 0 chr5 528514 528632 -199101518 + (GGCTG)n Simple_repeat Simple_repeat 1 122 0 2115 118 0 3 chr5 528998 529311 -199100839 + AluSx SINE Alu 1 312 0 2864 176 19 30 chr5 529311 529878 -199100272 + LTR39 LTR ERV1 223 783 0 862 170 78 0 chr5 530222 530375 -199099775 - AluJb SINE Alu -12 300 136 469 283 104 0 chr5 530376 530627 -199099523 - MER33 DNA MER1_type -44 280 4 309 300 80 33 chr5 530692 530842 -199099308 + L1MEc LINE L1 873 1029 -5367 304 212 153 0 chr5 531260 531345 -199098805 - L2 LINE L2 -3 3269 3172 693 194 0 0 chr5 531956 532116 -199098034 + (TG)n Simple_repeat Simple_repeat 1 160 0 513 244 0 0 chr5 533135 533295 -199096855 + (TG)n Simple_repeat Simple_repeat 1 160 0 2372 74 0 0 chr5 533941 534240 -199095910 - AluY SINE Alu -12 299 1 290 234 76 10 chr5 534349 534528 -199095622 - MSTC LTR MaLR -208 188 1 388 121 22 22 chr5 534582 534673 -199095477 + (TCTCTG)n Simple_repeat Simple_repeat 2 92 0 267 237 36 5 chr5 534673 534892 -199095258 - Harlequin LTR ERV1 -5805 1091 866 359 174 27 27 chr5 534896 535045 -199095105 + (TCTCTG)n Simple_repeat Simple_repeat 2 150 0 550 326 23 19 chr5 535070 535328 -199094822 - L1M4 LINE L1 -2010 4136 3878 183 243 0 0 chr5 535427 535464 -199094686 + MIR SINE MIR 108 144 -118 184 176 0 0 chr5 538644 538678 -199091472 + MIR SINE MIR 109 142 -120 413 214 200 39 chr5 540568 540853 -199089297 - MLT1F1 LTR MaLR -93 474 144 399 283 53 23 chr5 541072 541362 -199088788 - MLT1F1 LTR MaLR -230 337 27 239 374 52 7 chr5 544743 544898 -199085252 - MIR SINE MIR -2 260 99 2367 296 96 9 chr5 545237 545800 -199084350 - L1MC4a LINE L1 0 7808 7295 1458 187 8 0 chr5 545800 546067 -199084083 - AluJb SINE Alu -4 308 40 2367 296 96 9 chr5 546067 546568 -199083582 - L1MC4a LINE L1 -513 7295 6652 24 0 0 0 chr5 546599 546623 -199083527 + AT_rich Low_complexity Low_complexity 1 24 0 338 362 83 24 chr5 546979 547402 -199082748 + L1MEd LINE L1 499 946 -5173 415 301 112 56 chr5 547478 547892 -199082258 + L1MEd LINE L1 960 1581 -909 366 255 13 27 chr5 547892 548041 -199082109 + L1MA10 LINE L1 6188 6334 0 366 394 5 23 chr5 548045 548240 -199081910 + L1MDb LINE L1 1194 1394 -5002 544 373 106 32 chr5 548293 548698 -199081452 + L1MDb LINE L1 1561 1995 -4592 997 314 134 23 chr5 549117 549954 -199080196 + L1MDb LINE L1 2402 3411 -2995 2415 70 0 0 chr5 549954 550252 -199079898 + AluY SINE Alu 1 298 -13 997 314 134 23 chr5 550252 550599 -199079551 + L1MDb LINE L1 3411 3718 -2688 * 4255 175 12 3 chr5 550593 551491 -199078659 + L1PA14 LINE L1 4474 5379 -767 2648 62 3 0 chr5 551471 551845 -199078305 + L1PA8 LINE L1 5797 6171 -1 * 5309 95 2 5 chr5 551841 552653 -199077497 + L1PA14 LINE L1 5352 6161 0 1378 284 123 26 chr5 552691 552744 -199077406 + L1MDb LINE L1 3697 3743 -2663 1998 125 0 7 chr5 552744 553047 -199077103 + AluSc SINE Alu 1 301 0 1378 284 123 26 chr5 553047 553837 -199076313 + L1MDb LINE L1 3743 4623 -1783 1671 212 73 9 chr5 553855 553962 -199076188 + L1M3 LINE L1 5363 5462 -721 252 0 0 0 chr5 553962 553990 -199076160 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1671 212 73 9 chr5 553990 554306 -199075844 + L1M3 LINE L1 5462 5813 -370 253 286 0 0 chr5 554308 554371 -199075779 + L1ME LINE L1 5748 5810 -354 256 286 0 0 chr5 554376 554439 -199075711 + L1ME LINE L1 5748 5810 -354 267 286 0 0 chr5 554512 554575 -199075575 + L1ME LINE L1 5748 5810 -354 248 302 0 0 chr5 554580 554643 -199075507 + L1ME LINE L1 5745 5807 -359 289 242 0 0 chr5 554648 554714 -199075436 + L1M3 LINE L1 5748 5813 -370 291 242 0 0 chr5 554716 554782 -199075368 + L1M2 LINE L1 5748 5813 -478 266 254 0 0 chr5 554784 554847 -199075303 + L1M4 LINE L1 5748 5810 -368 230 302 0 0 chr5 554852 554915 -199075235 + L1ME LINE L1 5748 5810 -354 280 258 0 0 chr5 554920 554986 -199075164 + L1M2 LINE L1 5748 5813 -478 267 286 0 0 chr5 554988 555051 -199075099 + L1ME LINE L1 5745 5807 -359 254 286 0 0 chr5 555124 555187 -199074963 + L1ME LINE L1 5748 5810 -354 254 286 0 0 chr5 555192 555255 -199074895 + L1ME LINE L1 5748 5810 -354 254 286 0 0 chr5 555260 555323 -199074827 + L1ME LINE L1 5748 5810 -354 271 270 0 0 chr5 555328 555391 -199074759 + L1ME LINE L1 5748 5810 -354 2217 189 33 2 chr5 555396 555819 -199074331 + L1MB3 LINE L1 5748 6183 0 2202 256 133 5 chr5 556987 557734 -199072416 - L1MA4 LINE L1 0 6300 5459 672 200 0 0 chr5 558321 558481 -199071669 + (CA)n Simple_repeat Simple_repeat 1 160 0 313 212 153 0 chr5 559092 559177 -199070973 + L2 LINE L2 3172 3269 -3 842 55 47 12 chr5 562906 563250 -199066900 + (TG)n Simple_repeat Simple_repeat 1 356 0 363 334 68 50 chr5 563317 563681 -199066469 - L1ME LINE L1 -5011 1059 688 603 310 120 24 chr5 563999 564658 -199065492 + L1ME3A LINE L1 1231 1952 -4655 485 332 61 56 chr5 564712 565223 -199064927 + L1M2 LINE L1 1736 2243 -4605 3747 108 8 4 chr5 565223 565732 -199064418 - MER9 LTR ERVK 0 511 1 485 332 61 56 chr5 565732 565961 -199064189 + L1M2 LINE L1 2243 3497 -3351 1678 42 0 0 chr5 565961 566175 -199063975 - LTR14B LTR ERVK -394 214 1 912 283 80 11 chr5 566179 566618 -199063532 + L1M2 LINE L1 3980 4448 -2400 1584 194 8 8 chr5 566628 567005 -199063145 + L1M2 LINE L1 4972 5348 -1500 714 127 22 0 chr5 567003 567137 -199063013 - L1 LINE L1 -1369 4777 4641 * 447 184 0 0 chr5 567145 567232 -199062918 + GA-rich Low_complexity Low_complexity 1 87 0 302 338 62 14 chr5 567232 567377 -199062773 + L1ME3A LINE L1 2226 2377 -4049 616 232 90 0 chr5 567386 567541 -199062609 - MER93b LTR ERV1 -203 170 2 1139 306 117 9 chr5 567592 568155 -199061995 + L1ME3A LINE L1 5539 6162 -284 25 31 0 0 chr5 568339 568371 -199061779 + AT_rich Low_complexity Low_complexity 1 32 0 2147 103 3 10 chr5 568374 568507 -199061643 + AluY SINE Alu 1 133 -178 2070 130 0 16 chr5 568507 568822 -199061328 + AluSg SINE Alu 1 310 0 2147 103 3 10 chr5 568822 568989 -199061161 + AluY SINE Alu 133 299 -12 674 252 34 17 chr5 569936 570174 -199059976 + L1MCa LINE L1 2640 2881 -3545 1188 54 0 0 chr5 570179 570326 -199059824 + AluY SINE Alu 158 304 -7 2223 77 0 13 chr5 570400 570698 -199059452 - AluY SINE Alu -17 294 1 26 0 0 0 chr5 571637 571663 -199058487 + AT_rich Low_complexity Low_complexity 1 26 0 2501 46 10 0 chr5 572506 572809 -199057341 + AluY SINE Alu 1 306 -5 285 191 38 30 chr5 573380 573511 -199056639 + GA-rich Low_complexity Low_complexity 5 136 0 595 171 26 0 chr5 573623 573740 -199056410 - MER45A DNA AcHobo 0 178 59 243 293 0 13 chr5 573819 573894 -199056256 + (TG)n Simple_repeat Simple_repeat 1 74 0 2012 136 0 7 chr5 575274 575583 -199054567 + AluSx SINE Alu 1 307 -5 607 356 99 55 chr5 575610 576123 -199054027 + L1ME4a LINE L1 5304 5846 -275 2526 227 94 21 chr5 576123 576796 -199053354 + MER72 LTR ERV1 1 722 0 607 356 99 55 chr5 576796 576860 -199053290 + L1ME4a LINE L1 5846 5906 -215 259 221 96 19 chr5 576887 576991 -199053159 + L1ME4a LINE L1 6009 6120 -1 187 114 45 0 chr5 577549 577593 -199052557 + GA-rich Low_complexity Low_complexity 3 48 0 338 303 9 9 chr5 579193 579302 -199050848 + Charlie7 DNA MER1_type 335 443 -2169 2031 98 7 11 chr5 580482 580794 -199049356 + AluSx SINE Alu 1 311 0 2101 87 6 81 chr5 581982 582317 -199047833 + AluSx SINE Alu 1 310 -2 336 24 0 0 chr5 583591 583632 -199046518 + (TG)n Simple_repeat Simple_repeat 1 41 0 23 0 0 0 chr5 584280 584303 -199045847 + GC_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr5 584338 584387 -199045763 + GC_rich Low_complexity Low_complexity 1 49 0 238 161 16 65 chr5 585929 585991 -199044159 + L1MB8 LINE L1 6120 6178 0 24 32 0 0 chr5 588119 588150 -199042000 + GC_rich Low_complexity Low_complexity 1 31 0 22 106 0 0 chr5 588214 588299 -199041851 + GC_rich Low_complexity Low_complexity 1 85 0 21 36 0 0 chr5 588352 588380 -199041770 + GC_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 588404 588435 -199041715 + GC_rich Low_complexity Low_complexity 1 31 0 192 40 0 0 chr5 588478 588503 -199041647 + (CGGG)n Simple_repeat Simple_repeat 2 26 0 27 29 0 0 chr5 588611 588645 -199041505 + GC_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr5 597395 597416 -199032734 + AT_rich Low_complexity Low_complexity 1 21 0 205 330 29 10 chr5 597707 597810 -199032340 + (CATA)n Simple_repeat Simple_repeat 3 107 0 * 215 314 0 14 chr5 597742 597812 -199032338 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 566 220 6 12 chr5 600443 601088 -199029062 + (CTCA)n Simple_repeat Simple_repeat 1 641 0 466 241 6 6 chr5 601452 601782 -199028368 + (CTCA)n Simple_repeat Simple_repeat 1 330 0 206 231 15 0 chr5 601814 601879 -199028271 + (CTCA)n Simple_repeat Simple_repeat 2 67 0 263 245 11 0 chr5 601981 602075 -199028075 + (TTCA)n Simple_repeat Simple_repeat 1 95 0 1990 156 38 26 chr5 602668 602903 -199027247 - MSTB LTR MaLR 0 426 182 2166 139 18 0 chr5 602903 603234 -199026916 - MER1B DNA MER1_type 0 337 1 1990 156 38 26 chr5 603234 603415 -199026735 - MSTB LTR MaLR -244 182 5 501 183 26 0 chr5 603406 603521 -199026629 - MSTB LTR MaLR -304 122 5 * 501 183 26 0 chr5 603512 603627 -199026523 - MSTB LTR MaLR -304 122 5 252 149 60 0 chr5 603618 603685 -199026465 - MSTB2 LTR MaLR -319 138 68 * 2116 115 3 6 chr5 606489 606802 -199023348 - AluSx SINE Alu 0 312 1 374 289 66 68 chr5 608044 608480 -199021670 - MLT1D LTR MaLR -3 464 1 567 283 60 92 chr5 608493 608861 -199021289 - MLT1D-int LTR MaLR -15 1356 1001 223 354 12 6 chr5 609897 610061 -199020089 + C-rich Low_complexity Low_complexity 3 167 0 * 272 193 0 86 chr5 609957 610154 -199019996 + CT-rich Low_complexity Low_complexity 1 180 0 * 410 145 0 88 chr5 610015 610380 -199019770 + (CCTCG)n Simple_repeat Simple_repeat 1 332 0 372 270 22 28 chr5 611175 611411 -199018739 + G-rich Low_complexity Low_complexity 1 234 0 444 180 81 12 chr5 613407 613568 -199016582 + (CCCCAG)n Simple_repeat Simple_repeat 6 177 0 765 208 0 0 chr5 614017 614195 -199015955 + (CTCA)n Simple_repeat Simple_repeat 1 178 0 210 315 0 14 chr5 621675 621748 -199008402 + G-rich Low_complexity Low_complexity 4 75 0 47 104 0 0 chr5 624018 624191 -199005959 + GC_rich Low_complexity Low_complexity 1 173 0 1643 98 102 70 chr5 625875 626160 -199003990 - AluSx SINE Alu -15 297 4 240 366 12 6 chr5 632067 632239 -198997911 + (TATG)n Simple_repeat Simple_repeat 1 173 0 * 309 336 0 0 chr5 632164 632277 -198997873 + (TG)n Simple_repeat Simple_repeat 1 113 0 183 42 0 0 chr5 635962 635986 -198994164 + (CACCC)n Simple_repeat Simple_repeat 4 27 0 2111 118 10 0 chr5 837892 838181 -198791969 + AluSx SINE Alu 1 292 -20 2230 104 13 16 chr5 838541 838850 -198791300 + AluSx SINE Alu 1 308 -4 242 282 42 0 chr5 839330 839401 -198790749 + MIR SINE MIR 29 102 -160 855 275 84 10 chr5 839439 839910 -198790240 + MER68 LTR ERV1 12 557 -5 213 303 15 0 chr5 839917 839983 -198790167 + MIR SINE MIR 147 213 -49 195 254 167 53 chr5 843636 843750 -198786400 + MIR3 SINE MIR 3 129 -79 2297 215 120 38 chr5 843753 844701 -198785449 + L1MC/D LINE L1 16 1360 -5180 926 297 129 11 chr5 844984 845425 -198784725 + L1MC/D LINE L1 4106 4598 -1942 1315 242 33 41 chr5 845438 845925 -198784225 + L1MC/D LINE L1 5375 5861 -743 1676 178 3 18 chr5 848436 848722 -198781428 - AluJo SINE Alu -30 282 1 812 218 35 44 chr5 848742 848971 -198781179 - AluJo SINE Alu -1 311 85 517 233 62 11 chr5 848971 849147 -198781003 - AluJb SINE Alu -62 250 66 4662 147 14 1 chr5 849505 850274 -198779876 + Tigger1 DNA MER2_type 75 853 -1565 1024 147 21 16 chr5 854182 854372 -198775778 + L1PB4 LINE L1 5958 6148 -8 6833 134 36 8 chr5 859078 860275 -198769875 + Tigger1 DNA MER2_type 971 2201 -217 3880 171 28 52 chr5 860582 861499 -198768651 - L1MC1 LINE L1 0 6333 5439 1810 129 0 80 chr5 862153 862311 -198767839 + AluSx SINE Alu 1 121 -191 2583 82 0 9 chr5 862311 862627 -198767523 + AluSp SINE Alu 1 313 0 1810 129 0 80 chr5 862627 862794 -198767356 + AluSx SINE Alu 121 300 -12 355 203 37 0 chr5 862818 862903 -198767247 + AluJ/FLAM SINE Alu 11 88 -214 2047 119 3 52 chr5 863085 863413 -198766737 - AluSx SINE Alu 0 312 1 1024 106 0 28 chr5 863418 863560 -198766590 - FRAM SINE Alu -15 161 24 1288 119 0 11 chr5 863712 863897 -198766253 - AluSg/x SINE Alu -9 301 119 964 117 37 19 chr5 863899 864061 -198766089 - AluSg/x SINE Alu -23 287 123 328 287 57 38 chr5 864084 864241 -198765909 + L1MDa LINE L1 2020 2179 -4361 192 162 0 147 chr5 867209 867277 -198762873 + MIR SINE MIR 161 218 -44 746 248 221 34 chr5 867361 867858 -198762292 - MLT1G LTR MaLR 0 590 1 2009 120 39 0 chr5 868022 868305 -198761845 + AluSx SINE Alu 1 294 -18 581 235 6 0 chr5 868566 868745 -198761405 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 267 152 0 0 chr5 868768 868814 -198761336 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 2343 98 0 3 chr5 868817 869114 -198761036 - AluSx SINE Alu -16 296 1 2063 96 0 14 chr5 869168 869448 -198760702 - AluSx SINE Alu -11 301 26 1280 175 62 15 chr5 871476 871781 -198758369 - AluSx SINE Alu 0 329 12 526 125 0 153 chr5 875631 875775 -198754375 - AluJb SINE Alu -189 123 2 1838 122 15 4 chr5 876195 876466 -198753684 - AluSx SINE Alu 0 312 39 1731 171 30 36 chr5 878485 878930 -198751220 + L1M4 LINE L1 5333 5775 -409 226 244 110 0 chr5 878973 879055 -198751095 - MIR SINE MIR -1 261 171 299 231 51 13 chr5 879267 879345 -198750805 - MLT1E3 LTR MaLR -293 237 157 556 122 11 22 chr5 881207 881320 -198748830 + AluSg/x SINE Alu 199 310 0 1978 148 0 10 chr5 881329 881639 -198748511 + AluSx SINE Alu 4 310 -2 271 250 16 0 chr5 881816 881880 -198748270 - Alu SINE Alu -22 279 215 23 0 0 0 chr5 882624 882647 -198747503 + GC_rich Low_complexity Low_complexity 1 23 0 366 23 0 0 chr5 883169 883212 -198746938 + (GAA)n Simple_repeat Simple_repeat 2 44 0 214 192 0 19 chr5 887611 887663 -198742487 + A-rich Low_complexity Low_complexity 3 53 0 255 310 18 9 chr5 887960 888073 -198742077 + GA-rich Low_complexity Low_complexity 3 116 0 472 190 100 0 chr5 888243 888343 -198741807 - MLT1E3 LTR MaLR -472 152 43 1213 203 132 33 chr5 888343 888782 -198741368 - MER66A LTR ERV1 0 478 97 1323 152 64 0 chr5 888861 889125 -198741025 - MER66A-int LTR ERV1 0 6676 6396 1583 128 48 93 chr5 889126 889523 -198740627 - MER66-int LTR ERV1 -1740 4936 4558 469 226 0 19 chr5 889524 889630 -198740520 - MER4D LTR ERV1 -712 160 57 495 99 165 8 chr5 889642 889763 -198740387 - MER66-int LTR ERV1 -2230 4446 4307 343 263 33 70 chr5 892735 892948 -198737202 - HAL1 LINE L1 -685 1822 1618 444 324 53 18 chr5 893382 893552 -198736598 - HAL1 LINE L1 -1300 1207 1032 1344 126 34 25 chr5 898132 898390 -198731760 - MER1B DNA MER1_type 0 339 119 697 171 13 7 chr5 900081 900239 -198729911 - MER1B DNA MER1_type -168 129 1 21 0 0 0 chr5 901424 901445 -198728705 + AT_rich Low_complexity Low_complexity 1 21 0 2165 105 0 25 chr5 902384 902698 -198727452 - AluSc SINE Alu -3 306 1 2182 114 3 0 chr5 903825 904124 -198726026 - AluSg SINE Alu -10 300 1 502 231 9 0 chr5 905211 905319 -198724831 - LTR55 LTR ERV -321 227 119 332 181 0 58 chr5 907672 907827 -198722323 + (CTGGGG)n Simple_repeat Simple_repeat 3 148 0 446 238 0 48 chr5 907857 908004 -198722146 + (CTGGGG)n Simple_repeat Simple_repeat 2 141 0 884 263 30 25 chr5 908005 908389 -198721761 - LTR24 LTR ERV1 0 532 186 1497 210 146 7 chr5 909864 910274 -198719876 - LTR24 LTR ERV1 0 467 1 1054 268 55 29 chr5 910494 910949 -198719201 - L1ME LINE L1 -2897 3183 2717 1592 196 76 10 chr5 910958 911355 -198718795 - MER50 LTR ERV1 0 734 312 552 253 179 16 chr5 911524 911832 -198718318 - MER50 LTR ERV1 -367 367 10 649 290 60 17 chr5 911871 912223 -198717927 - L1ME LINE L1 -3426 2654 2288 1051 215 119 10 chr5 912223 912534 -198717616 + MER2 DNA MER2_type 1 345 0 587 252 64 36 chr5 912541 912791 -198717359 - L1ME LINE L1 -3944 2317 2061 471 332 158 46 chr5 913166 913770 -198716380 - L1ME LINE L1 -4965 1089 472 553 279 107 32 chr5 914411 914775 -198715375 - HAL1 LINE L1 -367 2140 1720 1396 288 73 67 chr5 915997 916946 -198713204 + L1MEc LINE L1 29 986 -5410 2152 64 8 0 chr5 916946 917212 -198712938 + AluY SINE Alu 22 289 -22 1396 288 73 67 chr5 917212 917375 -198712775 + L1MEc LINE L1 986 1147 -5249 1077 191 70 8 chr5 917376 917414 -198712736 - MLT2B3 LTR ERVL 0 554 520 702 93 0 0 chr5 917414 917522 -198712628 + (TAGA)n Simple_repeat Simple_repeat 2 109 0 1077 191 70 8 chr5 917522 917740 -198712410 - MLT2B3 LTR ERVL -34 520 282 781 296 70 0 chr5 917763 918077 -198712073 + L1MEc LINE L1 1408 1743 -4653 340 58 0 19 chr5 918149 918201 -198711949 + MER75 DNA T2_type 464 514 0 724 182 0 54 chr5 918219 918367 -198711783 + AluJo SINE Alu 1 140 -172 598 251 166 19 chr5 918368 918675 -198711475 + L1MEc LINE L1 1863 2214 -4182 331 261 11 0 chr5 918783 918875 -198711275 + L1MA10 LINE L1 6233 6325 -9 240 179 0 36 chr5 923802 923858 -198706292 + (TCTCTG)n Simple_repeat Simple_repeat 4 57 0 431 216 6 0 chr5 923863 924030 -198706120 + CT-rich Low_complexity Low_complexity 1 168 0 268 263 12 0 chr5 926217 926297 -198703853 - MLT1H LTR MaLR -6 543 463 498 225 11 18 chr5 928935 929098 -198701052 - MER58 DNA MER1_type -2188 232 40 3360 204 39 68 chr5 931358 932343 -198697807 - LTR5 LTR ERVK -13 956 1 2111 118 10 0 chr5 936865 937154 -198692996 + AluSx SINE Alu 1 292 -20 2230 104 13 16 chr5 937513 937822 -198692328 + AluSx SINE Alu 1 308 -4 242 282 42 0 chr5 938302 938373 -198691777 + MIR SINE MIR 29 102 -160 877 273 84 10 chr5 938411 938882 -198691268 + MER68 LTR ERV1 12 557 -5 213 303 15 0 chr5 938889 938955 -198691195 + MIR SINE MIR 147 213 -49 195 254 167 53 chr5 942573 942687 -198687463 + MIR3 SINE MIR 3 129 -79 2160 214 124 41 chr5 942690 943638 -198686512 + L1MD1 LINE L1 16 1360 -5180 926 297 129 11 chr5 944390 944831 -198685319 + L1MD1 LINE L1 4106 4598 -1942 1315 242 33 41 chr5 944844 945331 -198684819 + L1MD1 LINE L1 5375 5861 -743 2667 191 35 9 chr5 948335 948915 -198681235 + L1MD1 LINE L1 5824 6418 -218 771 180 36 6 chr5 948928 949095 -198681055 + L1MD1 LINE L1 6465 6636 0 2378 85 0 0 chr5 949446 949740 -198680410 + AluSc SINE Alu 1 294 -15 1504 159 101 7 chr5 950758 951035 -198679115 - AluJb SINE Alu -9 303 1 281 277 76 25 chr5 951168 951287 -198678863 - MIR SINE MIR -50 212 88 186 267 0 56 chr5 951590 951680 -198678470 - L2 LINE L2 -5 3308 3224 1372 78 0 22 chr5 951683 951863 -198678287 + AluSc SINE Alu 134 309 0 617 206 0 0 chr5 951998 952124 -198678026 + MLT2B1 LTR ERVL 1 126 -394 219 231 0 39 chr5 953130 953208 -198676942 + (CGGGG)n Simple_repeat Simple_repeat 2 76 0 2533 64 0 3 chr5 955513 955810 -198674340 - AluY SINE Alu -15 296 1 2161 122 26 0 chr5 957033 957336 -198672814 - AluSx SINE Alu -1 311 1 231 324 37 37 chr5 959772 959908 -198670242 - MIR SINE MIR -10 252 117 427 253 121 22 chr5 960854 961036 -198669114 + MER3 DNA MER1_type 1 200 -9 192 244 44 0 chr5 961784 961829 -198668321 - MIR3 SINE MIR -52 156 110 3965 160 52 33 chr5 961977 962906 -198667244 + L1MA9 LINE L1 5152 6108 -204 797 183 119 29 chr5 963198 963443 -198666707 + L1MA9 LINE L1 6067 6307 -5 22 35 0 0 chr5 963458 963487 -198666663 + AT_rich Low_complexity Low_complexity 1 29 0 2201 121 3 7 chr5 963544 963850 -198666300 + AluSx SINE Alu 1 305 -7 2446 98 0 0 chr5 964479 964785 -198665365 + AluSx SINE Alu 1 306 -6 1759 183 0 32 chr5 965411 965722 -198664428 - AluJb SINE Alu -11 301 1 423 259 208 10 chr5 966048 966245 -198663905 + MIR SINE MIR 17 252 -10 2684 50 0 0 chr5 967343 967646 -198662504 + AluY SINE Alu 5 307 -4 1568 121 62 107 chr5 967678 968034 -198662116 - MER2 DNA MER2_type -5 340 1 361 289 35 0 chr5 968102 968216 -198661934 + L2 LINE L2 3194 3311 -2 2147 129 3 0 chr5 969231 969525 -198660625 - AluSx SINE Alu -17 295 1 1576 151 65 48 chr5 969858 970150 -198660000 - AluJo SINE Alu -15 297 1 404 235 39 0 chr5 971339 971441 -198658709 + L1ME1 LINE L1 5879 5984 -182 371 133 0 0 chr5 971649 971709 -198658441 - AluS SINE Alu -8 292 233 705 172 0 16 chr5 971709 971837 -198658313 - AluJo SINE Alu -152 160 35 2040 137 0 16 chr5 971878 972184 -198657966 + AluJb SINE Alu 1 301 -11 1870 131 31 17 chr5 972484 972775 -198657375 + AluSx SINE Alu 1 295 -17 21 57 0 19 chr5 972946 972976 -198657174 + AT_rich Low_complexity Low_complexity 1 31 -21 2261 115 3 0 chr5 972976 973271 -198656879 - AluSx SINE Alu -16 296 1 21 57 0 19 chr5 973271 973293 -198656857 + AT_rich Low_complexity Low_complexity 31 52 0 2190 180 43 24 chr5 973738 974205 -198655945 - L1PB4 LINE L1 -2 6154 5679 268 276 110 8 chr5 974479 974606 -198655544 - MLT1J LTR MaLR -279 232 93 459 263 51 0 chr5 974694 974812 -198655338 + MER3 DNA MER1_type 8 131 -78 199 298 91 33 chr5 975213 975334 -198654816 - L2 LINE L2 -3 3269 3142 2772 96 123 9 chr5 975397 975854 -198654296 + MER9 LTR ERVK 3 511 0 21229 74 6 3 chr5 975854 979082 -198651068 + HERVK9 LTR ERVK 1 3232 -2684 588 62 12 0 chr5 979073 979154 -198650996 + HERVK9 LTR ERVK 3154 3235 -2681 * 1050 123 0 0 chr5 979150 979305 -198650845 + HERVK9 LTR ERVK 3171 3325 -2591 364 159 0 0 chr5 979370 979439 -198650711 + HERVK9 LTR ERVK 3257 3325 -2591 * 388 167 56 22 chr5 979416 979506 -198650644 + HERVK9 LTR ERVK 3233 3325 -2591 * 402 136 0 0 chr5 979503 979569 -198650581 + HERVK9 LTR ERVK 3256 3321 -2595 372 171 0 0 chr5 979570 979640 -198650510 + HERVK9 LTR ERVK 3256 3325 -2591 * 393 152 0 0 chr5 979637 979703 -198650447 + HERVK9 LTR ERVK 3256 3321 -2595 1093 155 0 0 chr5 979704 979878 -198650272 + HERVK9 LTR ERVK 3256 3429 -2487 * 16454 89 20 0 chr5 979868 982154 -198647996 + HERVK9 LTR ERVK 3304 5634 -282 2033 117 36 6 chr5 982179 982524 -198647626 + HERVK9 LTR ERVK 5635 5916 0 3122 104 89 4 chr5 982525 982995 -198647155 + MER9 LTR ERVK 2 511 0 506 331 74 8 chr5 982996 983253 -198646897 + L1M4 LINE L1 4172 4445 -1701 2198 106 23 3 chr5 986633 986935 -198643215 - AluSx SINE Alu -4 308 1 1518 148 81 4 chr5 986979 987250 -198642900 + AluJb SINE Alu 1 292 -20 304 242 0 30 chr5 987257 987323 -198642827 + HAL1 LINE L1 1100 1163 -1344 1426 178 103 11 chr5 988646 988927 -198641223 - AluJb SINE Alu -5 307 1 1213 171 83 0 chr5 989075 989292 -198640858 - MER46A DNA MER2_type 0 236 2 1502 144 137 39 chr5 990005 990289 -198639861 - AluJo SINE Alu 0 312 1 709 178 89 13 chr5 990411 990568 -198639582 + MER1B DNA MER1_type 1 129 -168 225 57 57 0 chr5 991405 991440 -198638710 + MER1B DNA MER1_type 133 129 -168 276 81 0 0 chr5 991590 991627 -198638523 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 991652 991689 -198638461 + MER1B DNA MER1_type 133 129 -168 226 139 0 0 chr5 991809 991845 -198638305 + MER1B DNA MER1_type 134 129 -168 226 139 0 0 chr5 991873 991909 -198638241 + MER1B DNA MER1_type 134 129 -168 1390 126 38 25 chr5 991981 992238 -198637912 + MER1B DNA MER1_type 119 339 0 397 321 55 18 chr5 996824 996989 -198633161 + HAL1 LINE L1 1037 1207 -1300 448 255 57 6 chr5 997423 997580 -198632570 + HAL1 LINE L1 1618 1782 -725 282 246 5 128 chr5 997658 997861 -198632289 + GA-rich Low_complexity Low_complexity 1 178 0 250 234 16 120 chr5 997827 998019 -198632131 + G-rich Low_complexity Low_complexity 5 176 0 * 380 153 34 117 chr5 997954 998254 -198631896 + GA-rich Low_complexity Low_complexity 1 275 0 384 188 76 168 chr5 998667 999024 -198631126 + LTR56 LTR ERV1 1 324 -121 230 239 30 0 chr5 999079 999146 -198631004 + LTR23 LTR ERV1 353 421 -16 183 100 0 0 chr5 1001749 1001779 -198628371 + (A)n Simple_repeat Simple_repeat 1 30 0 228 250 31 0 chr5 1001841 1001905 -198628245 + L1ME LINE L1 48 113 -5957 2257 110 0 7 chr5 1002097 1002397 -198627753 + AluSc SINE Alu 1 298 -11 1701 187 3 16 chr5 1002411 1002727 -198627423 + AluJb SINE Alu 1 312 0 1681 268 115 30 chr5 1002764 1003330 -198626820 + L1ME LINE L1 282 798 -5282 1894 122 93 34 chr5 1003330 1003684 -198626466 - THE1C LTR MaLR 0 375 1 1681 268 115 30 chr5 1003684 1003890 -198626260 + L1ME LINE L1 798 985 -5095 1673 215 0 0 chr5 1003890 1004202 -198625948 + AluJo SINE Alu 1 312 0 1681 268 115 30 chr5 1004202 1004560 -198625590 + L1ME LINE L1 985 1492 -4588 2716 214 142 1 chr5 1005077 1005891 -198624259 - L1ME1 LINE L1 -5 6161 5222 3480 191 36 3 chr5 1005905 1006619 -198623531 - L1MB3 LINE L1 -39 6144 5407 1792 112 4 27 chr5 1008968 1009228 -198620922 + AluSg SINE Alu 52 305 -5 289 228 21 98 chr5 1009705 1009898 -198620252 + (CA)n Simple_repeat Simple_repeat 2 179 0 342 210 10 115 chr5 1010052 1010252 -198619898 + (CA)n Simple_repeat Simple_repeat 2 180 0 290 279 52 23 chr5 1010316 1010488 -198619662 + (CA)n Simple_repeat Simple_repeat 2 178 0 14907 133 36 11 chr5 1013704 1014267 -198615883 - Tigger1 DNA MER2_type 0 2418 1871 1978 108 4 0 chr5 1014267 1014525 -198615625 - AluSx SINE Alu -15 297 39 14907 133 36 11 chr5 1014525 1016320 -198613830 - Tigger1 DNA MER2_type -547 1871 1 21 0 0 0 chr5 1017171 1017192 -198612958 + AT_rich Low_complexity Low_complexity 1 21 0 2230 112 7 0 chr5 1017377 1017672 -198612478 + AluSx SINE Alu 1 297 -15 235 300 103 25 chr5 1017856 1018099 -198612051 + L1ME LINE L1 2221 2482 -3598 299 160 120 0 chr5 1018312 1018387 -198611763 - L1MEc LINE L1 -4305 2091 2008 913 128 27 0 chr5 1018387 1018536 -198611614 - Tigger1 DNA MER2_type -750 1668 1516 2121 121 0 29 chr5 1018659 1018965 -198611185 - AluJb SINE Alu -15 297 1 428 248 223 34 chr5 1018965 1019110 -198611040 + L1ME LINE L1 2623 2739 -3341 889 77 77 8 chr5 1019110 1019240 -198610910 - MER85 DNA T2_type 0 139 1 428 248 223 34 chr5 1019240 1019300 -198610850 + L1ME LINE L1 2739 2867 -3213 1425 184 10 37 chr5 1019767 1020061 -198610089 + AluJo SINE Alu 1 286 -26 445 296 58 36 chr5 1020614 1020770 -198609380 + L1MEc LINE L1 825 976 -5229 2590 59 0 3 chr5 1020770 1021073 -198609077 + AluY SINE Alu 1 302 -9 445 296 58 36 chr5 1021073 1021400 -198608750 + L1MEc LINE L1 976 1224 -4981 1471 246 131 47 chr5 1021412 1022207 -198607943 + L1MEc LINE L1 1497 2224 -1640 315 0 0 0 chr5 1022207 1022242 -198607908 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2071 114 4 4 chr5 1022244 1022525 -198607625 - AluSx SINE Alu -31 281 1 1471 246 131 47 chr5 1022525 1023162 -198606988 + L1MEc LINE L1 2224 3000 -864 * 8333 182 77 32 chr5 1023155 1024655 -198605495 - L1M4 LINE L1 -2466 3916 2485 2166 99 25 0 chr5 1024655 1024939 -198605211 + AluSx SINE Alu 1 291 -21 8333 182 77 32 chr5 1024939 1026483 -198603667 - L1M4 LINE L1 -3897 2485 1012 3311 147 20 61 chr5 1026483 1027121 -198603029 - LTR9 LTR ERV1 0 612 1 8333 182 77 32 chr5 1027121 1027145 -198603005 - L1M4 LINE L1 -5370 1012 991 414 0 0 0 chr5 1027145 1027191 -198602959 + (TTA)n Simple_repeat Simple_repeat 3 48 0 8333 182 77 32 chr5 1027191 1027529 -198602621 - L1M4 LINE L1 -5391 991 670 4750 123 47 5 chr5 1027529 1028277 -198601873 - MER4E LTR ERV1 0 779 1 8333 182 77 32 chr5 1028277 1028588 -198601562 - L1M4 LINE L1 -5712 670 14 5002 158 56 8 chr5 1028610 1029472 -198600678 + MER4D LTR ERV1 1 903 0 198 71 0 0 chr5 1029872 1029900 -198600250 + (GA)n Simple_repeat Simple_repeat 2 29 0 331 253 65 84 chr5 1030067 1030221 -198599929 + L1M LINE L1 5274 5424 -2384 1917 79 16 4 chr5 1030925 1031179 -198598971 - L1PA6 LINE L1 0 6154 5898 200 204 34 34 chr5 1031314 1031402 -198598748 + GA-rich Low_complexity Low_complexity 1 88 0 384 188 76 168 chr5 1031815 1032172 -198597978 + LTR56 LTR ERV1 1 324 -121 230 239 30 0 chr5 1032227 1032294 -198597856 + LTR23 LTR ERV1 353 421 -16 183 100 0 0 chr5 1034897 1034927 -198595223 + (A)n Simple_repeat Simple_repeat 1 30 0 228 250 31 0 chr5 1034989 1035053 -198595097 + L1ME LINE L1 48 113 -5957 2257 110 0 7 chr5 1035245 1035545 -198594605 + AluSc SINE Alu 1 298 -11 1701 187 3 16 chr5 1035559 1035875 -198594275 + AluJb SINE Alu 1 312 0 1681 268 116 29 chr5 1035912 1036478 -198593672 + L1ME LINE L1 282 798 -5282 1894 122 93 34 chr5 1036478 1036832 -198593318 - THE1C LTR MaLR 0 375 1 1681 268 116 29 chr5 1036832 1037038 -198593112 + L1ME LINE L1 798 985 -5095 1673 215 0 0 chr5 1037038 1037350 -198592800 + AluJo SINE Alu 1 312 0 1681 268 116 29 chr5 1037350 1037700 -198592450 + L1ME LINE L1 985 1486 -4594 2878 204 166 1 chr5 1038224 1039032 -198591118 - L1ME1 LINE L1 -5 6161 5222 7154 196 31 18 chr5 1039046 1039990 -198590160 - L1MB3 LINE L1 -39 6144 5214 1914 176 7 0 chr5 1039990 1040285 -198589865 - AluJo SINE Alu -12 300 4 7154 196 31 18 chr5 1040285 1041858 -198588292 - L1MB3 LINE L1 -969 5214 3591 271 310 3 57 chr5 1042743 1042998 -198587152 + G-rich Low_complexity Low_complexity 1 241 0 306 346 0 13 chr5 1043188 1043347 -198586803 + G-rich Low_complexity Low_complexity 2 158 0 * 357 255 11 69 chr5 1043273 1043533 -198586617 + GA-rich Low_complexity Low_complexity 1 244 0 1418 159 13 4 chr5 1043895 1044127 -198586023 + AluJo SINE Alu 1 234 -78 743 83 19 0 chr5 1045357 1045465 -198584685 + HY1 scRNA scRNA 2 111 -1 881 101 0 25 chr5 1045484 1045603 -198584547 + AluJb SINE Alu 178 293 -19 319 257 47 0 chr5 1046830 1047001 -198583149 + (TG)n Simple_repeat Simple_repeat 1 179 0 266 238 33 26 chr5 1047036 1047187 -198582963 + (TG)n Simple_repeat Simple_repeat 1 152 0 189 0 0 0 chr5 1047820 1047841 -198582309 + (A)n Simple_repeat Simple_repeat 1 21 0 308 274 152 19 chr5 1047923 1048233 -198581917 + MLT1C LTR MaLR 45 395 -72 250 69 0 128 chr5 1048335 1048437 -198581713 + (TGGGGG)n Simple_repeat Simple_repeat 4 92 0 185 50 0 100 chr5 1048484 1048524 -198581626 + (TGGGGG)n Simple_repeat Simple_repeat 3 38 0 220 206 22 54 chr5 1048761 1048945 -198581205 + (CCCG)n Simple_repeat Simple_repeat 2 179 0 * 295 175 16 63 chr5 1048824 1048950 -198581200 + C-rich Low_complexity Low_complexity 5 124 0 253 258 162 0 chr5 1049516 1049683 -198580467 - L2 LINE L2 -253 3060 2867 683 269 126 31 chr5 1050362 1050719 -198579431 + L2 LINE L2 1712 2102 -1212 891 254 61 7 chr5 1050822 1051102 -198579048 - L1MB4 LINE L1 0 6180 5886 6236 217 49 15 chr5 1051103 1053218 -198576932 - L1MB4 LINE L1 -428 5752 3581 509 272 201 10 chr5 1053235 1053529 -198576621 + L2 LINE L2 2107 2456 -858 269 306 31 0 chr5 1053555 1053653 -198576497 - LTR67 LTR ERVL -22 535 435 219 297 16 16 chr5 1054390 1054454 -198575696 + L2 LINE L2 3125 3188 -84 347 297 35 0 chr5 1056313 1056458 -198573692 + G-rich Low_complexity Low_complexity 5 154 0 265 279 154 44 chr5 1057931 1058067 -198572083 - MIR SINE MIR -76 186 36 205 204 19 19 chr5 1058716 1058770 -198571380 + MIR SINE MIR 79 132 -130 217 250 26 53 chr5 1060123 1060199 -198569951 + MIR SINE MIR 189 262 0 834 164 0 0 chr5 1060826 1060966 -198569184 - L1MB5 LINE L1 -12 6162 6023 2456 218 36 14 chr5 1061294 1061927 -198568223 - L1MB5 LINE L1 -110 6064 5418 4653 217 51 38 chr5 1061963 1062325 -198567825 - L1MB5 LINE L1 -1002 5144 4788 2227 86 20 3 chr5 1062325 1062503 -198567647 - AluSc SINE Alu -2 307 121 387 0 0 0 chr5 1062503 1062546 -198567604 + (TG)n Simple_repeat Simple_repeat 2 44 0 2227 86 20 3 chr5 1062546 1062659 -198567491 - AluSc SINE Alu -188 121 11 4653 217 51 38 chr5 1062659 1062770 -198567380 - L1MB5 LINE L1 -1358 4788 4680 2268 106 0 3 chr5 1062770 1063063 -198567087 + AluSg SINE Alu 1 292 -18 297 0 0 0 chr5 1063066 1063099 -198567051 + (TA)n Simple_repeat Simple_repeat 2 34 0 4653 217 51 38 chr5 1063099 1064016 -198566134 - L1MB5 LINE L1 -1467 4679 3731 185 191 234 0 chr5 1064226 1064273 -198565877 + MIR SINE MIR 168 225 -37 192 247 161 25 chr5 1066791 1066872 -198563278 + MIR SINE MIR 168 259 -3 1195 135 0 42 chr5 1066909 1067124 -198563026 - MER75 DNA T2_type -306 208 3 1070 198 74 4 chr5 1067124 1067346 -198562804 + MSTA LTR MaLR 189 428 0 2132 144 52 12 chr5 1068175 1068578 -198561572 - L1MA4 LINE L1 -11 6289 5871 1792 112 4 27 chr5 1073744 1074004 -198556146 + AluSg SINE Alu 52 305 -5 289 228 21 98 chr5 1074481 1074674 -198555476 + (CA)n Simple_repeat Simple_repeat 2 179 0 342 210 10 115 chr5 1074828 1075028 -198555122 + (CA)n Simple_repeat Simple_repeat 2 180 0 269 299 46 17 chr5 1075092 1075266 -198554884 + (CA)n Simple_repeat Simple_repeat 2 180 0 14907 133 36 11 chr5 1078482 1079045 -198551105 - Tigger1 DNA MER2_type 0 2418 1871 1978 108 4 0 chr5 1079045 1079303 -198550847 - AluSx SINE Alu -15 297 39 14907 133 36 11 chr5 1079303 1081098 -198549052 - Tigger1 DNA MER2_type -547 1871 1 21 0 0 0 chr5 1081949 1081970 -198548180 + AT_rich Low_complexity Low_complexity 1 21 0 2230 112 7 0 chr5 1082155 1082450 -198547700 + AluSx SINE Alu 1 297 -15 250 296 103 25 chr5 1082634 1082877 -198547273 + L1M4 LINE L1 2287 2548 -3598 299 160 120 0 chr5 1083090 1083165 -198546985 - L1MEc LINE L1 -4305 2091 2008 913 128 27 0 chr5 1083165 1083314 -198546836 - Tigger1 DNA MER2_type -750 1668 1516 2131 121 0 29 chr5 1083437 1083744 -198546406 - AluJb SINE Alu -14 298 1 428 248 223 34 chr5 1083744 1083889 -198546261 + L1M4 LINE L1 2689 2805 -3341 889 77 77 8 chr5 1083889 1084019 -198546131 - MER85 DNA T2_type 0 139 1 428 248 223 34 chr5 1084019 1084079 -198546071 + L1M4 LINE L1 2805 2933 -3213 1425 184 10 37 chr5 1084546 1084840 -198545310 + AluJo SINE Alu 1 286 -26 445 296 58 36 chr5 1085393 1085549 -198544601 + L1MEc LINE L1 825 976 -5229 2590 59 0 3 chr5 1085549 1085852 -198544298 + AluY SINE Alu 1 302 -9 445 296 58 36 chr5 1085852 1086179 -198543971 + L1MEc LINE L1 976 1224 -4981 1467 249 129 47 chr5 1086191 1086986 -198543164 + L1MEc LINE L1 1497 2225 -1639 315 0 0 0 chr5 1086986 1087021 -198543129 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2071 114 4 4 chr5 1087023 1087304 -198542846 - AluSx SINE Alu -31 281 1 1467 249 129 47 chr5 1087304 1087941 -198542209 + L1MEc LINE L1 2225 3000 -864 * 10352 185 81 34 chr5 1087934 1089433 -198540717 - L1M4 LINE L1 -2466 3916 2489 2166 99 25 0 chr5 1089433 1089717 -198540433 + AluSx SINE Alu 1 291 -21 10352 185 81 34 chr5 1089717 1091261 -198538889 - L1M4 LINE L1 -3893 2489 1019 3311 147 20 61 chr5 1091261 1091899 -198538251 - LTR9 LTR ERV1 0 612 1 10352 185 81 34 chr5 1091899 1091922 -198538228 - L1M4 LINE L1 -5363 1019 999 360 0 0 0 chr5 1091922 1091962 -198538188 + (TTA)n Simple_repeat Simple_repeat 3 42 0 10352 185 81 34 chr5 1091962 1092300 -198537850 - L1M4 LINE L1 -5383 999 678 4750 123 47 5 chr5 1092300 1093048 -198537102 - MER4E LTR ERV1 0 779 1 10352 185 81 34 chr5 1093048 1093359 -198536791 - L1M4 LINE L1 -5704 678 14 5002 158 56 8 chr5 1093381 1094243 -198535907 + MER4D LTR ERV1 1 903 0 198 71 0 0 chr5 1094643 1094671 -198535479 + (GA)n Simple_repeat Simple_repeat 2 29 0 331 253 65 84 chr5 1094838 1094992 -198535158 + L1ME4a LINE L1 5274 5424 -2384 6120 57 5 4 chr5 1095696 1096489 -198533661 - L1PA6 LINE L1 0 6154 5361 1703 181 21 21 chr5 1096503 1096878 -198533272 + L1MB3 LINE L1 3893 4267 -1879 * 4716 222 7 3 chr5 1096864 1097983 -198532167 - L1PB1 LINE L1 -879 5267 4144 * 5519 75 19 82 chr5 1097978 1098495 -198531655 + L1PB1 LINE L1 5254 5802 -349 240 35 0 0 chr5 1098495 1098524 -198531626 + (CA)n Simple_repeat Simple_repeat 2 30 0 5519 75 19 82 chr5 1098524 1098609 -198531541 + L1PB1 LINE L1 5802 5891 -260 505 42 32 21 chr5 1098609 1098704 -198531446 + (TA)n Simple_repeat Simple_repeat 2 97 0 5519 75 19 82 chr5 1098704 1099059 -198531091 + L1PB1 LINE L1 5891 6151 0 2253 137 0 0 chr5 1099067 1099373 -198530777 + AluSx SINE Alu 3 308 -4 4437 193 32 67 chr5 1099375 1099489 -198530661 + L1MB3 LINE L1 4256 4372 -1811 2523 76 0 0 chr5 1099489 1099792 -198530358 + AluY SINE Alu 1 303 -8 4437 193 32 67 chr5 1099792 1099967 -198530183 + L1MB3 LINE L1 4372 4551 -1632 2271 101 3 3 chr5 1099967 1100265 -198529885 + AluY SINE Alu 1 298 -13 429 20 0 0 chr5 1100265 1100315 -198529835 + (TA)n Simple_repeat Simple_repeat 2 51 0 4437 193 32 67 chr5 1100315 1102007 -198528143 + L1MB3 LINE L1 4549 6166 -17 304 294 12 12 chr5 1103433 1103518 -198526632 + L1ME4a LINE L1 5838 5922 -199 276 221 11 46 chr5 1105393 1105684 -198524466 + GA-rich Low_complexity Low_complexity 1 280 0 1426 178 103 11 chr5 1106913 1107194 -198522956 - AluJb SINE Alu -5 307 1 1213 171 83 0 chr5 1107342 1107559 -198522591 - MER46A DNA MER2_type 0 236 2 1502 144 137 39 chr5 1108275 1108559 -198521591 - AluJo SINE Alu 0 312 1 709 178 89 13 chr5 1108681 1108838 -198521312 + MER1B DNA MER1_type 1 129 -168 276 81 0 0 chr5 1109861 1109898 -198520252 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1110047 1110084 -198520066 + MER1B DNA MER1_type 133 129 -168 235 111 0 0 chr5 1110144 1110180 -198519970 + MER1B DNA MER1_type 134 129 -168 243 108 0 0 chr5 1110271 1110308 -198519842 + MER1B DNA MER1_type 133 129 -168 237 108 0 0 chr5 1110303 1110340 -198519810 + MER1B DNA MER1_type 133 129 -168 * 243 108 0 0 chr5 1110431 1110468 -198519682 + MER1B DNA MER1_type 133 129 -168 239 62 0 0 chr5 1110463 1110495 -198519655 + MER1B DNA MER1_type 133 124 -173 * 225 132 0 0 chr5 1110622 1110660 -198519490 + MER1B DNA MER1_type 132 129 -168 225 132 0 0 chr5 1110750 1110788 -198519362 + MER1B DNA MER1_type 132 129 -168 235 111 0 0 chr5 1110880 1110916 -198519234 + MER1B DNA MER1_type 134 129 -168 243 108 0 0 chr5 1111039 1111076 -198519074 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111071 1111108 -198519042 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111103 1111140 -198519010 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111135 1111172 -198518978 + MER1B DNA MER1_type 133 129 -168 235 111 0 0 chr5 1111553 1111589 -198518561 + MER1B DNA MER1_type 134 129 -168 243 108 0 0 chr5 1111616 1111653 -198518497 + MER1B DNA MER1_type 133 129 -168 244 108 0 0 chr5 1111776 1111813 -198518337 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111808 1111845 -198518305 + MER1B DNA MER1_type 133 129 -168 * 248 105 0 0 chr5 1111871 1111909 -198518241 + MER1B DNA MER1_type 132 129 -168 225 132 0 0 chr5 1111967 1112005 -198518145 + MER1B DNA MER1_type 132 129 -168 243 108 0 0 chr5 1112257 1112294 -198517856 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1112577 1112614 -198517536 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1112737 1112774 -198517376 + MER1B DNA MER1_type 133 129 -168 226 65 0 0 chr5 1112801 1112832 -198517318 + MER1B DNA MER1_type 133 123 -174 1564 120 9 19 chr5 1112852 1113113 -198517037 + MER1B DNA MER1_type 119 337 -2 630 88 0 0 chr5 1113237 1113317 -198516833 + MADE1 DNA Mariner 1 80 0 1976 159 0 0 chr5 1113383 1113679 -198516471 - AluJb SINE Alu -8 304 9 460 255 73 14 chr5 1113816 1114021 -198516129 + L1MD2 LINE L1 5802 6029 -137 789 245 82 90 chr5 1114077 1114501 -198515649 + L1MC5 LINE L1 5412 5832 -1976 2310 98 7 0 chr5 1115373 1115668 -198514482 + AluSq SINE Alu 1 297 -16 381 284 56 10 chr5 1115870 1116067 -198514083 + L1MC5 LINE L1 6960 7165 -796 1633 91 14 5 chr5 1116071 1116281 -198513869 + AluSq SINE Alu 85 296 -17 232 167 88 114 chr5 1116308 1116422 -198513728 - MER5A DNA MER1_type -2 187 77 184 239 250 11 chr5 1116488 1116576 -198513574 + MER5A DNA MER1_type 77 185 -4 325 261 34 0 chr5 1117402 1117490 -198512660 - MER3 DNA MER1_type -118 91 1 258 204 20 0 chr5 1117941 1117990 -198512160 - L2 LINE L2 0 3313 3264 2292 73 59 0 chr5 1118625 1118913 -198511237 - AluY SINE Alu -6 305 1 369 255 206 6 chr5 1118993 1119149 -198511001 + MIR SINE MIR 17 206 -56 637 170 0 0 chr5 1119426 1119520 -198510630 - AluJ/FLAM SINE Alu -217 95 2 2842 123 102 21 chr5 1119756 1120286 -198509864 - MER4B LTR ERV1 -37 573 1 581 332 124 21 chr5 1120371 1120853 -198509297 + L3 LINE CR1 403 934 -643 2164 89 3 7 chr5 1121156 1121460 -198508690 - AluSp SINE Alu -10 303 1 1338 146 56 0 chr5 1121463 1121731 -198508419 - AluJb SINE Alu 0 312 30 332 257 0 46 chr5 1122168 1122343 -198507807 + C-rich Low_complexity Low_complexity 2 168 0 195 310 46 35 chr5 1124788 1124875 -198505275 + MIR SINE MIR 171 258 -4 734 143 0 0 chr5 1125460 1125572 -198504578 + FLAM_C SINE Alu 2 113 -30 1195 157 44 0 chr5 1126360 1126564 -198503586 + AluJb SINE Alu 85 297 -15 557 132 0 0 chr5 1126803 1126879 -198503271 - FLAM_A SINE Alu -24 118 43 2002 110 0 14 chr5 1127446 1127615 -198502535 - AluY SINE Alu -11 300 135 2357 75 13 0 chr5 1127615 1127921 -198502229 - AluY SINE Alu 0 311 2 2002 110 0 14 chr5 1127921 1128043 -198502107 - AluY SINE Alu -176 135 13 1527 97 14 0 chr5 1128046 1128263 -198501887 + AluSg/x SINE Alu 90 309 -1 495 284 45 35 chr5 1128547 1128748 -198501402 - L2 LINE L2 0 3313 3111 1820 160 3 13 chr5 1128749 1129056 -198501094 + AluJb SINE Alu 1 304 -8 210 265 0 73 chr5 1129210 1129346 -198500804 + G-rich Low_complexity Low_complexity 6 131 0 207 0 0 0 chr5 1130228 1130251 -198499899 + (A)n Simple_repeat Simple_repeat 1 23 0 298 130 93 0 chr5 1130265 1130319 -198499831 - MADE1 DNA Mariner -21 59 1 235 366 35 25 chr5 1130414 1130616 -198499534 - L2 LINE L2 -199 3073 2870 313 260 38 10 chr5 1130632 1130813 -198499337 - L2 LINE L2 -285 2987 2793 231 128 26 0 chr5 1132855 1132894 -198497256 - MLT2C1 LTR ERVL -128 269 230 229 161 54 18 chr5 1135775 1135831 -198494319 - MLT2D LTR ERVL -128 286 229 311 65 22 0 chr5 1137620 1137666 -198492484 + (TA)n Simple_repeat Simple_repeat 1 47 0 189 0 0 0 chr5 1137942 1137963 -198492187 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 256 322 45 28 chr5 1140027 1140204 -198489946 - L2 LINE L2 -433 2881 2702 1373 302 50 22 chr5 1141225 1142211 -198487939 + L1ME1 LINE L1 4976 5994 -172 2865 171 36 2 chr5 1142924 1143402 -198486748 - LOR1a LTR ERV1 0 497 4 743 253 45 5 chr5 1144671 1144869 -198485281 - L1MA10 LINE L1 -10 6324 6119 2291 84 0 0 chr5 1146486 1146783 -198483367 - AluY SINE Alu -14 297 1 23 0 0 0 chr5 1146785 1146808 -198483342 + AT_rich Low_complexity Low_complexity 1 23 0 506 246 92 38 chr5 1146994 1147344 -198482806 + MER77 LTR ERV1 1 451 -154 599 236 66 46 chr5 1149851 1150092 -198480058 + MER33 DNA MER1_type 33 278 -46 212 241 0 60 chr5 1152649 1152732 -198477418 + C-rich Low_complexity Low_complexity 6 83 0 306 255 0 21 chr5 1152973 1153067 -198477083 + C-rich Low_complexity Low_complexity 2 93 0 459 94 118 47 chr5 1153769 1153854 -198476296 + AluJo SINE Alu 85 175 -137 1938 107 4 0 chr5 1155521 1155791 -198474359 + AluSx SINE Alu 1 271 -41 326 203 0 16 chr5 1155902 1155966 -198474184 + L2 LINE L2 3251 3313 0 405 247 62 0 chr5 1155984 1156081 -198474069 + Zaphod DNA AcHobo 500 602 -3429 200 264 190 33 chr5 1157139 1157260 -198472890 + L2 LINE L2 3128 3267 -46 635 163 0 36 chr5 1157947 1158113 -198472037 + (CCCTAA)n Simple_repeat Simple_repeat 6 165 0 388 143 0 33 chr5 1158124 1158215 -198471935 + (CCCTAA)n Simple_repeat Simple_repeat 6 93 0 207 0 0 0 chr5 1158403 1158426 -198471724 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2854 125 7 13 chr5 1158426 1158875 -198471275 - L1PB1 LINE L1 -11 6140 5695 1608 152 0 0 chr5 1159872 1160122 -198470028 - AluSx SINE Alu -62 250 1 2070 120 3 3 chr5 1160491 1160792 -198469358 - AluSg SINE Alu -9 301 1 32 26 0 0 chr5 1160801 1160840 -198469310 + AT_rich Low_complexity Low_complexity 1 39 0 2207 104 0 0 chr5 1162637 1162944 -198467206 - AluSg SINE Alu -3 307 1 213 250 59 0 chr5 1165400 1165468 -198464682 + MIR3 SINE MIR 116 187 -21 213 246 31 0 chr5 1165951 1166016 -198464134 + (TG)n Simple_repeat Simple_repeat 1 67 0 216 277 0 15 chr5 1166142 1166207 -198463943 + T-rich Low_complexity Low_complexity 2 65 0 269 262 8 41 chr5 1166607 1166729 -198463421 + (CGGGG)n Simple_repeat Simple_repeat 1 118 0 294 294 198 6 chr5 1168776 1168953 -198461197 - MLT1J2 LTR MaLR -51 399 189 486 337 118 3 chr5 1170446 1170802 -198459348 + HAL1 LINE L1 255 651 -1856 1386 207 97 19 chr5 1170909 1171401 -198458749 + MER74A LTR ERVL 1 558 0 326 221 18 71 chr5 1171548 1171661 -198458489 - L1MC5 LINE L1 -402 7559 7453 1491 195 94 6 chr5 1171694 1172199 -198457951 + L1MB7 LINE L1 5459 6164 -20 1035 285 121 11 chr5 1172208 1172653 -198457497 + HAL1 LINE L1 1295 1788 -719 5666 135 6 26 chr5 1174172 1174672 -198455478 + L1PA14 LINE L1 4877 5385 -776 2259 123 0 0 chr5 1174672 1174980 -198455170 + AluY SINE Alu 1 308 -3 5666 135 6 26 chr5 1174980 1175200 -198454950 + L1PA14 LINE L1 5385 5608 -553 8595 52 20 1 chr5 1175200 1176249 -198453901 - MER11C LTR ERVK -2 1069 1 5666 135 6 26 chr5 1176249 1176808 -198453342 + L1PA14 LINE L1 5608 6133 -28 913 204 23 27 chr5 1176910 1177130 -198453020 + L1MC3 LINE L1 7077 7295 -490 1358 159 92 78 chr5 1177139 1177510 -198452640 + L1MC3 LINE L1 7403 7778 -7 637 131 0 10 chr5 1178386 1178485 -198451665 + MER4A LTR ERV1 1 98 -566 1759 147 9 13 chr5 1178485 1178832 -198451318 + MER4A LTR ERV1 261 664 0 35 41 0 0 chr5 1179334 1179383 -198450767 + AT_rich Low_complexity Low_complexity 1 49 0 9571 42 0 2 chr5 1182158 1184105 -198446045 + L1PA5 LINE L1 4207 6154 0 247 269 65 21 chr5 1184959 1185052 -198445098 - HAL1 LINE L1 -1605 902 806 609 124 0 0 chr5 1187762 1187859 -198442291 + (TG)n Simple_repeat Simple_repeat 2 98 0 26 30 0 0 chr5 1188646 1188679 -198441471 + AT_rich Low_complexity Low_complexity 1 33 0 706 250 41 37 chr5 1189553 1189797 -198440353 - L1MC2 LINE L1 -181 6163 5919 1963 181 91 3 chr5 1189849 1190555 -198439595 - L1MC/D LINE L1 -750 5396 4791 2328 87 3 3 chr5 1192407 1192707 -198437443 - AluSp SINE Alu -13 300 1 6929 61 13 14 chr5 1193189 1194482 -198435668 - L1PA7 LINE L1 -2 6152 4854 299 265 10 0 chr5 1194594 1194692 -198435458 + L1ME1 LINE L1 6060 6158 -8 356 297 42 36 chr5 1195165 1195330 -198434820 - MLT1K LTR MaLR -24 564 399 3949 170 40 77 chr5 1196027 1196685 -198433465 - L1MA7 LINE L1 -5 6286 5610 346 109 0 47 chr5 1196685 1196749 -198433401 - Alu SINE Alu -2 300 240 3949 170 40 77 chr5 1196749 1197010 -198433140 - L1MA7 LINE L1 -681 5610 5341 2050 227 13 13 chr5 1197009 1197459 -198432691 + L1 LINE L1 3805 4254 -1892 * 2836 86 0 3 chr5 1197459 1197821 -198432329 - THE1C LTR MaLR 0 375 15 10390 101 70 3 chr5 1197821 1199302 -198430848 - THE1C-int LTR MaLR 0 1580 1 1777 63 5 5 chr5 1199302 1199525 -198430625 - THE1C LTR MaLR 0 375 153 367 132 0 0 chr5 1199527 1199580 -198430570 + Alu SINE Alu 1 53 -247 1041 79 0 0 chr5 1199582 1199733 -198430417 + AluSg/x SINE Alu 159 309 0 1160 102 25 0 chr5 1199733 1199890 -198430260 - THE1C LTR MaLR -214 161 1 3541 176 40 22 chr5 1199891 1200660 -198429490 + L1 LINE L1 4251 5033 -1113 643 76 0 0 chr5 1200660 1200739 -198429411 + MER30B DNA MER1_type 2 80 -110 874 132 0 0 chr5 1200739 1200853 -198429297 + AluSg SINE Alu 1 114 -196 41171 69 10 8 chr5 1200861 1206994 -198423156 + L1PA6 LINE L1 8 6147 -7 1421 104 5 0 chr5 1206994 1207186 -198422964 + AluSg SINE Alu 105 297 -15 396 0 0 0 chr5 1207187 1207231 -198422919 + (CA)n Simple_repeat Simple_repeat 2 45 0 884 119 60 8 chr5 1207233 1207367 -198422783 + MER30B DNA MER1_type 90 230 0 1119 210 27 57 chr5 1207367 1207700 -198422450 + L1 LINE L1 5027 5349 -797 214 222 14 14 chr5 1207841 1207913 -198422237 + (TA)n Simple_repeat Simple_repeat 2 73 0 728 205 0 0 chr5 1208957 1209084 -198421066 - MSTC LTR MaLR -80 348 222 261 394 8 0 chr5 1209983 1210110 -198420040 - L2 LINE L2 -1 3271 3144 411 304 119 5 chr5 1210508 1210709 -198419441 - L1M4b LINE L1 -6625 234 11 228 170 0 0 chr5 1414323 1414376 -198215774 + (CA)n Simple_repeat Simple_repeat 2 54 0 204 40 0 0 chr5 1414449 1414474 -198215676 + (CA)n Simple_repeat Simple_repeat 2 26 0 291 260 30 20 chr5 1415025 1415125 -198215025 + GA-rich Low_complexity Low_complexity 1 101 0 198 240 40 0 chr5 1417244 1417294 -198212856 - MER5A DNA MER1_type -91 98 47 233 204 20 0 chr5 1419789 1419838 -198210312 + Tigger3(Golem) DNA MER2_type 1 50 -2979 686 173 23 30 chr5 1429926 1430059 -198200091 + FLAM_C SINE Alu 1 132 -1 844 231 163 10 chr5 1430285 1430579 -198199571 + MER44D DNA MER2_type 1 609 0 2012 126 0 7 chr5 1432331 1432658 -198197492 + AluSx SINE Alu 1 312 0 1980 103 59 10 chr5 1438637 1438927 -198191223 - AluSx SINE Alu -8 304 1 279 0 0 0 chr5 1439870 1439901 -198190249 + (TG)n Simple_repeat Simple_repeat 1 31 0 1761 149 14 10 chr5 1440463 1440752 -198189398 - AluJb SINE Alu -22 290 1 2182 95 3 0 chr5 1440774 1441068 -198189082 + AluSg SINE Alu 1 295 -15 24 0 0 0 chr5 1442511 1442535 -198187615 + GC_rich Low_complexity Low_complexity 1 24 0 43 64 0 0 chr5 1442705 1442783 -198187367 + GC_rich Low_complexity Low_complexity 1 78 0 22 56 0 0 chr5 1442914 1442950 -198187200 + GC_rich Low_complexity Low_complexity 1 36 0 2388 58 0 0 chr5 1445839 1446130 -198184020 - AluY SINE Alu -19 292 2 3676 140 28 25 chr5 1446939 1447429 -198182721 - MER50 LTR ERV1 -23 711 217 1660 54 45 18 chr5 1447429 1447651 -198182499 - L1PA6 LINE L1 -5 6149 5922 3676 140 28 25 chr5 1447651 1447846 -198182304 - MER50 LTR ERV1 -517 217 24 2528 157 52 7 chr5 1447995 1448421 -198181729 + MER65A LTR ERV1 1 445 0 484 272 51 24 chr5 1448595 1448729 -198181421 - L1ME1 LINE L1 0 6166 6037 1892 145 10 3 chr5 1448729 1449025 -198181125 + AluJb SINE Alu 1 298 -14 484 272 51 24 chr5 1449025 1449326 -198180824 - L1ME1 LINE L1 -129 6037 5685 1671 140 52 4 chr5 1449330 1449601 -198180549 - AluJo SINE Alu -20 292 9 3174 150 8 0 chr5 1449601 1450209 -198179941 - L1 LINE L1 -1226 5562 4950 * 3189 209 129 3 chr5 1450207 1451067 -198179083 - L1 LINE L1 -5821 968 1 731 253 111 75 chr5 1451148 1451407 -198178743 - L1MEc LINE L1 -3654 2561 2313 2060 116 3 3 chr5 1451407 1451699 -198178451 - AluSq SINE Alu -21 292 1 1905 150 0 26 chr5 1451701 1452008 -198178142 - AluJb SINE Alu -13 299 1 731 253 111 75 chr5 1452008 1453076 -198177074 - L1MEc LINE L1 -3902 2313 1008 686 331 48 3 chr5 1453118 1453432 -198176718 - L1ME1 LINE L1 -2079 6371 6044 2224 106 0 6 chr5 1453446 1453757 -198176393 + AluSq SINE Alu 1 309 -4 3069 164 72 2 chr5 1454380 1454897 -198175253 - MER41C LTR ERV1 0 554 2 1362 184 46 20 chr5 1454898 1455246 -198174904 - MLT1B LTR MaLR -33 357 1 258 322 66 8 chr5 1456252 1456373 -198173777 - MIR SINE MIR -29 233 106 380 258 20 0 chr5 1457093 1457204 -198172946 + MER45B DNA AcHobo 67 177 -863 345 299 46 37 chr5 1457383 1457600 -198172550 + MER45B DNA AcHobo 575 793 -247 659 179 132 24 chr5 1458043 1458171 -198171979 + MER45B DNA AcHobo 785 898 -683 2076 113 14 0 chr5 1458171 1458463 -198171687 + AluSx SINE Alu 1 296 -16 659 179 132 24 chr5 1458463 1458546 -198171604 + MER45B DNA AcHobo 898 1019 -21 213 189 33 67 chr5 1459248 1459338 -198170812 + (CTGGGG)n Simple_repeat Simple_repeat 2 88 0 1969 120 0 4 chr5 1459406 1459682 -198170468 + AluSx SINE Alu 14 288 -24 1475 272 52 82 chr5 1459685 1460450 -198169700 + MER21B LTR ERV1 15 756 -107 2157 101 0 7 chr5 1460747 1461045 -198169105 + AluSx SINE Alu 1 296 -16 239 326 28 21 chr5 1461405 1461546 -198168604 + MER20B DNA MER1_type 257 398 -385 233 301 39 19 chr5 1461705 1461808 -198168342 + MER20B DNA MER1_type 679 783 0 862 129 8 8 chr5 1462659 1462791 -198167359 + AluSg SINE Alu 1 132 -178 2190 112 10 0 chr5 1462791 1463095 -198167055 + AluSg SINE Alu 1 307 -3 1813 118 0 0 chr5 1463298 1463552 -198166598 + AluSx SINE Alu 1 254 -58 339 85 0 0 chr5 1463566 1463613 -198166537 + (TG)n Simple_repeat Simple_repeat 2 48 0 514 309 40 0 chr5 1463616 1463791 -198166359 + L1MC1 LINE L1 4593 4774 -1372 245 270 45 11 chr5 1463809 1463898 -198166252 + (TGGG)n Simple_repeat Simple_repeat 4 95 0 5037 209 33 12 chr5 1463898 1465399 -198164751 + L1MC1 LINE L1 4802 6332 -1 2326 90 3 3 chr5 1465410 1465722 -198164428 + AluSp SINE Alu 1 312 -1 385 348 139 16 chr5 1465872 1466418 -198163732 + L1MC4a LINE L1 5269 5881 -1927 1306 174 92 90 chr5 1466566 1466945 -198163205 + MER66A LTR ERV1 99 478 0 4541 224 81 32 chr5 1467065 1468358 -198161792 + MER66A-int LTR ERV1 53 1408 -5268 2056 199 59 5 chr5 1468805 1469478 -198160672 + MER66A-int LTR ERV1 1424 2168 -4508 * 4315 235 53 20 chr5 1469467 1470050 -198160100 + MER66A-int LTR ERV1 2336 2898 -3778 1569 110 9 9 chr5 1470050 1470278 -198159872 - AluSc SINE Alu -17 292 65 4315 235 53 20 chr5 1470278 1471026 -198159124 + MER66A-int LTR ERV1 2898 3813 -2863 1336 74 0 0 chr5 1471053 1471216 -198158934 - AluSq SINE Alu -150 163 1 945 258 70 36 chr5 1471216 1471407 -198158743 + MER66A-int LTR ERV1 3827 4035 -2641 2227 100 0 3 chr5 1471407 1471707 -198158443 - AluSg SINE Alu -11 299 1 945 258 70 36 chr5 1471707 1471845 -198158305 + MER66A-int LTR ERV1 4035 4167 -2509 1709 135 0 105 chr5 1471848 1472181 -198157969 + AluJb SINE Alu 1 298 -4 610 189 0 24 chr5 1472219 1472346 -198157804 + MER66A-int LTR ERV1 4701 4824 -1852 281 231 15 0 chr5 1472421 1472486 -198157664 + MER66A-int LTR ERV1 6324 6389 -287 525 156 7 3 chr5 1472569 1472711 -198157439 - MER66A LTR ERV1 0 478 298 1425 192 91 0 chr5 1472762 1473070 -198157080 + MER66A-int LTR ERV1 6339 6674 -2 1093 213 144 56 chr5 1473172 1473572 -198156578 + MER66A LTR ERV1 97 478 0 669 265 55 0 chr5 1473967 1474186 -198155964 - MLT1C LTR MaLR -184 283 53 1772 109 66 0 chr5 1474305 1474562 -198155588 - AluSx SINE Alu -38 274 1 626 259 40 71 chr5 1474663 1474960 -198155190 - L1MC4a LINE L1 -3 7805 7518 1317 265 98 55 chr5 1474994 1475431 -198154719 - L1MC4a LINE L1 -387 7421 6935 1712 178 7 7 chr5 1475431 1475724 -198154426 - AluJb SINE Alu -19 293 1 1317 265 98 55 chr5 1475724 1476052 -198154098 - L1MC4a LINE L1 -873 6935 6623 626 193 114 0 chr5 1476237 1476377 -198153773 + MER45A DNA AcHobo 22 177 -1 674 231 89 41 chr5 1476378 1476697 -198153453 - L1MC4a LINE L1 -1332 6476 6113 3732 158 67 42 chr5 1477539 1478210 -198151940 - LTR12 LTR ERV1 0 688 1 632 202 97 45 chr5 1478304 1478551 -198151599 - pTR5 LTR ERV1 -1441 997 738 1393 226 29 9 chr5 1478579 1478929 -198151221 + MLT1A1 LTR MaLR 3 359 -6 446 316 0 7 chr5 1479270 1479422 -198150728 + (CA)n Simple_repeat Simple_repeat 1 151 0 415 300 9 3 chr5 1479456 1479791 -198150359 + (CA)n Simple_repeat Simple_repeat 1 337 0 1828 88 149 0 chr5 1480570 1480831 -198149319 + AluSx SINE Alu 1 300 -2 1166 134 32 0 chr5 1480835 1481021 -198149129 + AluSg/x SINE Alu 118 309 -1 371 291 125 35 chr5 1481296 1481640 -198148510 - MLT1E LTR MaLR -114 479 105 389 285 137 23 chr5 1482389 1482580 -198147570 - MIR SINE MIR -47 215 11 247 224 17 0 chr5 1484809 1484867 -198145283 - MER81 DNA DNA -54 60 2 902 164 0 11 chr5 1486141 1486416 -198143734 + (TCCA)n Simple_repeat Simple_repeat 1 272 0 189 0 0 0 chr5 1486428 1486449 -198143701 + (TCCA)n Simple_repeat Simple_repeat 4 24 0 572 198 12 17 chr5 1486488 1486660 -198143490 + (TCCA)n Simple_repeat Simple_repeat 1 171 0 215 263 0 0 chr5 1486668 1486725 -198143425 + (CCCA)n Simple_repeat Simple_repeat 3 59 0 * 226 271 0 0 chr5 1486698 1486746 -198143404 + polypyrimidine Low_complexity Low_complexity 4 51 0 344 246 8 0 chr5 1486749 1486871 -198143279 + (TCCA)n Simple_repeat Simple_repeat 2 124 0 296 231 10 0 chr5 1486907 1487011 -198143139 + (TCCA)n Simple_repeat Simple_repeat 2 106 0 248 235 59 69 chr5 1487011 1487113 -198143037 - L2 LINE L2 0 3272 3172 1030 218 64 123 chr5 1487470 1487924 -198142226 - MLT1C LTR MaLR -33 434 8 261 304 130 5 chr5 1488100 1488284 -198141866 - LTR16A1 LTR ERVL -3 454 248 476 286 20 6 chr5 1488642 1488842 -198141308 - L1M3 LINE L1 -722 5458 5254 253 323 161 29 chr5 1489865 1490249 -198139901 - L2 LINE L2 -518 2796 2362 383 299 134 5 chr5 1493694 1493888 -198136262 + L1MEd LINE L1 597 815 -5304 1168 297 87 14 chr5 1494127 1494690 -198135460 + L1MEc LINE L1 256 859 -5748 1183 58 41 35 chr5 1495129 1495330 -198134820 + AluY SINE Alu 119 311 0 237 342 46 20 chr5 1495489 1495641 -198134509 + L1MEc LINE L1 1699 1854 -4572 1362 307 91 21 chr5 1495884 1495941 -198134209 + L1MEc LINE L1 2244 2296 -4130 2184 118 0 0 chr5 1495941 1496245 -198133905 + AluSx SINE Alu 3 306 -6 1362 307 91 21 chr5 1496245 1497416 -198132734 + L1MEc LINE L1 2296 3507 -2919 286 295 155 0 chr5 1498078 1498207 -198131943 + MIR SINE MIR 65 213 -49 686 173 23 30 chr5 1503858 1503991 -198126159 + FLAM_C SINE Alu 1 132 -1 844 231 163 10 chr5 1504217 1504511 -198125639 + MER44D DNA MER2_type 1 609 0 252 59 0 0 chr5 1505244 1505278 -198124872 + (CATCC)n Simple_repeat Simple_repeat 2 35 0 241 296 31 0 chr5 1507301 1507399 -198122751 - MER58A DNA MER1_type 0 119 19 995 206 43 16 chr5 1508347 1508604 -198121546 - L1MB3 LINE L1 -8 6175 5912 1590 106 9 127 chr5 1509650 1509989 -198120161 - AluSp SINE Alu -12 301 3 237 297 89 10 chr5 1510072 1510173 -198119977 - MIR SINE MIR -59 149 41 769 185 11 0 chr5 1512444 1512622 -198117528 + (TG)n Simple_repeat Simple_repeat 1 180 0 362 252 34 3 chr5 1513400 1513709 -198116441 + (CA)n Simple_repeat Simple_repeat 1 318 0 225 254 103 40 chr5 1513753 1513977 -198116173 + MLT1I LTR MaLR 29 266 -143 277 219 65 24 chr5 1516041 1516164 -198113986 + (CGGGG)n Simple_repeat Simple_repeat 1 128 0 315 287 6 47 chr5 1516483 1516711 -198113439 + CT-rich Low_complexity Low_complexity 1 218 0 267 107 76 23 chr5 1520658 1520789 -198109361 + (TCTA)n Simple_repeat Simple_repeat 4 141 0 893 97 34 6 chr5 1520813 1520873 -198109277 + (TCCA)n Simple_repeat Simple_repeat 1 241 0 893 97 34 6 chr5 1520873 1521048 -198109102 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 697 128 41 6 chr5 1521074 1521246 -198108904 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 723 105 41 12 chr5 1521287 1521458 -198108692 + (TCCA)n Simple_repeat Simple_repeat 4 179 0 726 140 17 17 chr5 1521479 1521657 -198108493 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 1953 99 4 0 chr5 1523466 1523729 -198106421 - AluSq SINE Alu -14 299 36 379 309 15 5 chr5 1527593 1527794 -198102356 + L1MEc LINE L1 675 877 -5519 3887 167 70 14 chr5 1527794 1528545 -198101605 + L1MB3 LINE L1 4962 5808 -375 1790 174 3 22 chr5 1528545 1528862 -198101288 + AluJb SINE Alu 1 311 -1 3887 167 70 14 chr5 1528862 1529252 -198100898 + L1MB3 LINE L1 5808 6175 -8 2883 235 72 9 chr5 1529263 1530662 -198099488 + L1MEc LINE L1 1634 3085 -3130 280 311 27 12 chr5 1533685 1534028 -198096122 + (GGCTG)n Simple_repeat Simple_repeat 1 348 0 374 103 103 81 chr5 1535759 1535933 -198094217 + (TCCA)n Simple_repeat Simple_repeat 2 179 0 193 81 141 20 chr5 1536044 1536143 -198094007 + (TCCA)n Simple_repeat Simple_repeat 4 114 0 205 143 53 127 chr5 1536172 1536361 -198093789 + (TCCA)n Simple_repeat Simple_repeat 4 178 0 181 281 62 0 chr5 1538222 1538286 -198091864 - L3 LINE CR1 -425 1152 1085 2112 85 3 10 chr5 1539260 1539555 -198090595 + AluSc SINE Alu 1 293 -16 180 0 0 0 chr5 1539562 1539582 -198090568 + (GAAAA)n Simple_repeat Simple_repeat 5 24 0 301 220 33 0 chr5 1539654 1539804 -198090346 + GA-rich Low_complexity Low_complexity 1 155 0 243 0 0 0 chr5 1541616 1541643 -198088507 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 238 365 82 10 chr5 1542135 1542343 -198087807 + MIR SINE MIR 24 246 -16 850 186 10 0 chr5 1542428 1542722 -198087428 + (TGGA)n Simple_repeat Simple_repeat 1 297 0 215 246 36 0 chr5 1542704 1542814 -198087336 + (TAGA)n Simple_repeat Simple_repeat 3 116 0 * 1560 171 15 73 chr5 1542823 1543221 -198086929 + MLT1B LTR MaLR 16 390 0 274 200 40 13 chr5 1543234 1543384 -198086766 + (TAGA)n Simple_repeat Simple_repeat 3 156 0 273 333 19 0 chr5 1544480 1544585 -198085565 + MIR SINE MIR 79 185 -77 1541 154 18 91 chr5 1545963 1546294 -198083856 - AluJo SINE Alu -3 309 3 504 188 0 0 chr5 1546647 1546775 -198083375 + (CA)n Simple_repeat Simple_repeat 1 128 0 26 0 0 0 chr5 1547846 1547872 -198082278 + GC_rich Low_complexity Low_complexity 1 26 0 241 267 0 0 chr5 1548843 1548918 -198081232 + C-rich Low_complexity Low_complexity 1 75 0 641 238 105 28 chr5 1549006 1549292 -198080858 - MLT1A1 LTR MaLR -15 350 43 1491 170 65 0 chr5 1549559 1549835 -198080315 + AluJb SINE Alu 1 294 -18 1155 325 34 26 chr5 1550991 1551551 -198078599 + ERVL LTR ERVL 2615 3182 -2582 803 235 10 56 chr5 1551551 1551747 -198078403 - MER5A DNA MER1_type -2 187 1 1155 325 34 26 chr5 1551747 1551799 -198078351 + ERVL LTR ERVL 3182 3232 -2532 759 320 123 6 chr5 1551839 1552408 -198077742 + ERVL LTR ERVL 3267 3953 -1741 1521 256 72 4 chr5 1552410 1552894 -198077256 + L1M4 LINE L1 4201 4717 -1429 1917 235 97 27 chr5 1553134 1553156 -198076994 - L1ME1 LINE L1 -180 6055 6036 2082 110 0 0 chr5 1553156 1553437 -198076713 - AluSx SINE Alu -4 308 28 1917 235 97 27 chr5 1553437 1554551 -198075599 - L1ME1 LINE L1 -199 6036 4828 1499 192 58 36 chr5 1554551 1554915 -198075235 + MLT1A2 LTR MaLR 1 372 -2 1917 235 97 27 chr5 1554915 1555069 -198075081 - L1ME1 LINE L1 -1407 4828 4686 1604 240 63 40 chr5 1555082 1555760 -198074390 - L1ME1 LINE L1 -3068 3147 2454 1419 268 70 25 chr5 1555767 1556425 -198073725 - L1ME1 LINE L1 -4995 1234 577 261 224 0 0 chr5 1556437 1556486 -198073664 - L1ME1 LINE L1 -6311 85 37 2088 147 0 0 chr5 1556501 1556807 -198073343 - AluSx SINE Alu -6 306 1 373 259 98 0 chr5 1557006 1557118 -198073032 - L1MEc LINE L1 -3334 3092 2970 666 246 121 25 chr5 1557127 1557468 -198072682 - L1MEc LINE L1 -3513 2913 2606 2116 134 0 6 chr5 1557468 1557781 -198072369 - AluSx SINE Alu -1 311 1 666 246 121 25 chr5 1557781 1558062 -198072088 - L1MEc LINE L1 -3820 2606 2260 1744 161 25 3 chr5 1558062 1558347 -198071803 - AluSx SINE Alu -21 291 1 666 246 121 25 chr5 1558347 1558388 -198071762 - L1MEc LINE L1 -4166 2260 2224 494 306 139 28 chr5 1558388 1558711 -198071439 - L1MEc LINE L1 -4555 1967 1513 270 182 0 0 chr5 1558716 1558771 -198071379 - L1MEc LINE L1 -4859 1567 1513 270 182 0 0 chr5 1558776 1558831 -198071319 - L1MEc LINE L1 -4859 1567 1513 270 182 0 0 chr5 1558836 1558891 -198071259 - L1MEc LINE L1 -4859 1567 1513 270 182 0 0 chr5 1558896 1558951 -198071199 - L1MEc LINE L1 -4859 1567 1513 624 294 102 9 chr5 1558956 1559395 -198070755 - L1MEc LINE L1 -4851 1545 1066 782 311 58 18 chr5 1559405 1559785 -198070365 + ERVL LTR ERVL 4099 4493 -1271 267 396 43 13 chr5 1559863 1560093 -198070057 + ERVL LTR ERVL 4592 4828 -936 332 358 47 4 chr5 1560165 1560397 -198069753 + MLT1I LTR MaLR 61 302 -107 541 317 12 32 chr5 1560785 1561034 -198069116 + ERVL LTR ERVL 5191 5434 -330 332 391 0 0 chr5 1561035 1561209 -198068941 + (TG)n Simple_repeat Simple_repeat 2 175 0 287 280 34 46 chr5 1561137 1561312 -198068838 + (CATG)n Simple_repeat Simple_repeat 1 173 0 * 313 302 0 62 chr5 1561362 1561554 -198068596 + (CATG)n Simple_repeat Simple_repeat 1 180 0 219 401 0 6 chr5 1561528 1561700 -198068450 + (TG)n Simple_repeat Simple_repeat 2 172 0 * 272 392 0 0 chr5 1561775 1561928 -198068222 + (TG)n Simple_repeat Simple_repeat 2 154 0 375 359 0 6 chr5 1561955 1562136 -198068014 + (TG)n Simple_repeat Simple_repeat 1 180 0 491 260 13 29 chr5 1566892 1567903 -198062247 + (CA)n Simple_repeat Simple_repeat 1 995 0 304 364 6 11 chr5 1568048 1568224 -198061926 + (CA)n Simple_repeat Simple_repeat 1 175 0 2150 111 0 13 chr5 1571806 1572113 -198058037 + AluSx SINE Alu 5 307 -5 801 223 128 0 chr5 1577118 1577360 -198052790 - Tigger1 DNA MER2_type -2031 387 115 460 191 107 30 chr5 1577360 1577491 -198052659 - Tigger1 DNA MER2_type -2256 162 22 217 269 0 13 chr5 1579130 1579208 -198050942 + GA-rich Low_complexity Low_complexity 3 79 0 1586 147 73 18 chr5 1581469 1581755 -198048395 + AluJo SINE Alu 1 302 -10 235 229 16 0 chr5 1584752 1584813 -198045337 + (CTGGGG)n Simple_repeat Simple_repeat 2 63 0 666 184 11 10 chr5 1584816 1585110 -198045040 + (GGGTG)n Simple_repeat Simple_repeat 1 294 0 389 281 178 43 chr5 1592597 1592995 -198037155 + MLT1C LTR MaLR 4 455 -12 788 269 82 31 chr5 1593306 1593851 -198036299 + Looper DNA T2_type 29 641 -917 775 263 191 3 chr5 1594024 1594344 -198035806 + Looper DNA T2_type 873 1252 -306 323 304 40 8 chr5 1594823 1594948 -198035202 + Looper DNA T2_type 1350 1478 -80 445 171 170 24 chr5 1596131 1596285 -198033865 + MLT1D LTR MaLR 22 175 -215 2258 114 0 0 chr5 1598432 1598740 -198031410 + AluSx SINE Alu 1 308 -4 262 309 49 8 chr5 1599500 1599623 -198030527 + HAL1 LINE L1 1016 1143 -1364 206 214 0 0 chr5 1600820 1600862 -198029288 + (CA)n Simple_repeat Simple_repeat 1 42 0 278 258 12 24 chr5 1600869 1601036 -198029114 + (CATA)n Simple_repeat Simple_repeat 1 165 0 208 258 11 11 chr5 1601080 1601173 -198028977 + (CA)n Simple_repeat Simple_repeat 1 93 0 326 353 0 8 chr5 1601187 1601320 -198028830 + (CA)n Simple_repeat Simple_repeat 1 132 0 440 293 47 0 chr5 1602341 1602491 -198027659 - MER58A DNA MER1_type -28 196 40 336 258 53 13 chr5 1602963 1603114 -198027036 - Charlie8 DNA MER1_type -2185 232 76 213 358 0 0 chr5 1604107 1604283 -198025867 + (ACCTG)n Simple_repeat Simple_repeat 3 178 0 335 240 69 8 chr5 1605200 1605415 -198024735 - Charlie5 DNA MER1_type 0 2624 2341 231 365 0 10 chr5 1605734 1605838 -198024312 - L1M4 LINE L1 -2191 3955 3853 273 348 73 0 chr5 1606390 1606568 -198023582 - L1M4 LINE L1 -2992 3154 2964 2237 84 10 0 chr5 1606792 1607090 -198023060 + AluSp SINE Alu 1 301 -12 278 311 38 0 chr5 1609835 1609967 -198020183 + L1MC5 LINE L1 6695 6831 -1130 657 238 74 0 chr5 1610339 1610528 -198019622 + MLT1A1 LTR MaLR 147 349 -16 1604 180 38 11 chr5 1610641 1611022 -198019128 + MLT1B LTR MaLR 1 396 0 213 282 59 24 chr5 1615169 1615254 -198014896 - L2 LINE L2 -2 3270 3183 617 206 0 0 chr5 1666388 1666514 -197963636 - MLT2B1 LTR ERVL -394 126 1 1434 80 0 0 chr5 1666647 1666823 -197963327 - AluSc SINE Alu 0 309 134 281 277 76 25 chr5 1667218 1667337 -197962813 + MIR SINE MIR 88 212 -50 1508 161 103 4 chr5 1667470 1667743 -197962407 + AluJb SINE Alu 1 300 -12 2337 89 7 0 chr5 1668743 1669060 -197961090 - AluSc SINE Alu 0 319 1 670 210 36 6 chr5 1669411 1669578 -197960572 - L1MD1 LINE L1 0 6242 6071 1608 151 9 25 chr5 1669827 1670178 -197959972 - MER4A LTR ERV1 0 664 261 578 133 0 10 chr5 1670178 1670276 -197959874 - MER4A LTR ERV1 -566 98 2 683 196 0 8 chr5 1670751 1670884 -197959266 + FLAM_A SINE Alu 2 133 0 520 255 121 118 chr5 1670938 1671436 -197958714 + L1MEd LINE L1 661 1159 -4960 231 262 0 0 chr5 1672014 1672075 -197958075 + MER20B DNA MER1_type 481 541 -242 452 240 118 36 chr5 1674318 1674707 -197955443 - MER77 LTR ERV1 -102 503 1 2285 97 10 16 chr5 1674909 1675220 -197954930 + AluSg SINE Alu 1 309 -1 710 239 46 10 chr5 1676589 1676786 -197953364 + L1MA10 LINE L1 6121 6324 -10 2559 176 36 2 chr5 1678054 1678532 -197951618 + LOR1a LTR ERV1 4 497 0 1195 304 54 21 chr5 1679247 1680231 -197949919 - L1ME1 LINE L1 -172 5994 4976 267 297 85 18 chr5 1680895 1681060 -197949090 + L2 LINE L2 2706 2881 -433 2284 104 0 0 chr5 1681176 1681463 -197948687 + AluSx SINE Alu 1 287 -25 253 241 158 59 chr5 1681499 1681702 -197948448 + L1ME LINE L1 5303 5525 -639 250 295 84 36 chr5 1681833 1681999 -197948151 + L1ME LINE L1 5650 5823 -347 232 176 0 0 chr5 1682457 1682508 -197947642 + Alu SINE Alu 248 298 -4 204 135 0 0 chr5 1684413 1684450 -197945700 + (GAA)n Simple_repeat Simple_repeat 3 39 0 189 0 0 0 chr5 1685229 1685250 -197944900 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 226 160 20 20 chr5 1686092 1686142 -197944008 + MLT2D LTR ERVL 249 298 -116 268 265 33 9 chr5 1693817 1693952 -197936198 + L2 LINE L2 2851 2987 -285 227 370 24 18 chr5 1693968 1694133 -197936017 + L2 LINE L2 2870 3035 -237 305 111 93 0 chr5 1694264 1694318 -197935832 + MADE1 DNA Mariner 1 59 -21 180 315 14 84 chr5 1694330 1694473 -197935677 + L2 LINE L2 3107 3239 -74 581 277 16 41 chr5 1695286 1695319 -197934831 + L2 LINE L2 3078 3110 -203 2042 144 10 13 chr5 1695319 1695511 -197934639 - AluJb SINE Alu 0 312 120 459 0 0 0 chr5 1695511 1695562 -197934588 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2042 144 10 13 chr5 1695562 1695682 -197934468 - AluJb SINE Alu -192 120 1 581 277 16 41 chr5 1695682 1695890 -197934260 + L2 LINE L2 3110 3313 0 1648 92 14 0 chr5 1696183 1696400 -197933750 - AluSg/x SINE Alu -1 311 92 2048 118 0 4 chr5 1696403 1696702 -197933448 + AluY SINE Alu 13 310 0 473 141 0 0 chr5 1697278 1697349 -197932801 + FLAM SINE Alu 49 119 -24 1259 162 44 0 chr5 1697590 1697794 -197932356 - AluJb SINE Alu -15 297 85 736 162 0 0 chr5 1698584 1698701 -197931449 - FLAM_C SINE Alu -16 117 1 421 235 0 43 chr5 1701787 1701974 -197928176 + G-rich Low_complexity Low_complexity 2 180 0 1235 142 43 114 chr5 1702403 1702728 -197927422 + AluJb SINE Alu 1 302 0 2270 78 3 3 chr5 1702738 1703044 -197927106 + AluSp SINE Alu 1 306 -7 292 157 114 0 chr5 1704277 1704347 -197925803 + MER5A DNA MER1_type 47 124 -65 613 247 110 46 chr5 1706664 1707088 -197923062 + MLT1D LTR MaLR 30 457 -10 402 269 157 15 chr5 1707772 1707969 -197922181 - L1ME LINE L1 -311 5810 5586 405 329 43 18 chr5 1710232 1710396 -197919754 + L1MEd LINE L1 922 1089 -5030 941 156 88 34 chr5 1710439 1710644 -197919506 - MLT1A1 LTR MaLR -11 354 139 656 291 103 19 chr5 1711285 1711316 -197918834 + L1MB7 LINE L1 5848 5875 -309 2256 78 0 7 chr5 1711316 1711612 -197918538 + AluY SINE Alu 1 294 -17 656 291 103 19 chr5 1711612 1711832 -197918318 + L1MB7 LINE L1 5875 6111 -73 9718 35 5 0 chr5 1713859 1715779 -197914371 + L1PA5 LINE L1 4222 6149 -5 1870 112 10 56 chr5 1716162 1716466 -197913684 + AluSx SINE Alu 3 292 -20 2228 120 0 0 chr5 1716653 1716961 -197913189 + AluSx SINE Alu 1 308 -4 457 176 79 22 chr5 1716986 1717135 -197913015 - L1P LINE L1 -748 5406 5254 3806 184 13 5 chr5 1717137 1717888 -197912262 + L1MA4A LINE L1 5372 6128 -175 2010 112 36 10 chr5 1717888 1718341 -197911809 - AluSx SINE Alu 0 461 1 913 175 35 0 chr5 1718344 1718515 -197911635 + L1MA4 LINE L1 6116 6292 -8 310 340 77 19 chr5 1718772 1718928 -197911222 + L1ME4a LINE L1 5476 5640 -481 275 297 123 36 chr5 1718928 1719123 -197911027 + MER58C DNA MER1_type 4 215 0 402 282 91 112 chr5 1719164 1719504 -197910646 + L1ME4a LINE L1 5693 6025 -96 223 248 0 60 chr5 1719667 1719784 -197910366 + (GGGTG)n Simple_repeat Simple_repeat 3 112 0 286 236 8 57 chr5 1721433 1721556 -197908594 + (CGTG)n Simple_repeat Simple_repeat 1 117 0 214 171 0 0 chr5 1722653 1722694 -197907456 + GA-rich Low_complexity Low_complexity 2 42 0 209 130 0 43 chr5 1722776 1722822 -197907328 + (CCCCCA)n Simple_repeat Simple_repeat 4 47 0 858 284 118 5 chr5 1723511 1723916 -197906234 + MLT1C LTR MaLR 17 467 0 539 167 113 20 chr5 1724331 1724481 -197905669 - ORSL DNA AcHobo -8 267 104 336 262 2 43 chr5 1724654 1724748 -197905402 - MLT1C LTR MaLR -45 460 331 657 196 104 159 chr5 1724753 1725119 -197905031 + MLT1A2 LTR MaLR 1 365 -25 2070 138 3 0 chr5 1725614 1725925 -197904225 - AluSq SINE Alu -1 312 1 1029 284 57 3 chr5 1727586 1727917 -197902233 - MLT1A2 LTR MaLR 0 374 26 253 178 42 0 chr5 1728637 1728755 -197901395 + (TG)n Simple_repeat Simple_repeat 2 124 0 210 326 32 21 chr5 1730362 1730457 -197899693 - L3 LINE CR1 -236 1341 1246 306 251 0 0 chr5 1730562 1730790 -197899360 + (TG)n Simple_repeat Simple_repeat 1 228 0 347 205 0 43 chr5 1730811 1730996 -197899154 + (TG)n Simple_repeat Simple_repeat 2 178 0 337 286 162 11 chr5 1732286 1732471 -197897679 - MIR SINE MIR -48 214 2 228 306 24 57 chr5 1732498 1732622 -197897528 + L2 LINE L2 3180 3299 -14 180 0 0 0 chr5 1732626 1732646 -197897504 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 1178 118 0 15 chr5 1734182 1734386 -197895764 - L1P5 LINE L1 -662 5489 5289 747 86 19 0 chr5 1734386 1734491 -197895659 + MER30 DNA MER1_type 124 230 0 201 119 0 134 chr5 1735058 1735125 -197895025 + (CGGGGG)n Simple_repeat Simple_repeat 5 62 0 574 133 10 10 chr5 1736365 1736463 -197893687 + MER4A LTR ERV1 1 98 -566 * 1651 126 22 62 chr5 1736459 1736823 -197893327 + MER4A LTR ERV1 257 664 0 21 36 0 0 chr5 1739254 1739282 -197890868 + AT_rich Low_complexity Low_complexity 1 28 0 565 261 32 13 chr5 1739338 1739495 -197890655 + MER63 DNA MER1_type 3 788 -274 246 263 0 91 chr5 1739829 1739928 -197890222 + MIR SINE MIR 6 95 -167 206 333 118 7 chr5 1740998 1741151 -197888999 + MIR SINE MIR 33 202 -60 189 0 0 0 chr5 1741239 1741260 -197888890 + (TA)n Simple_repeat Simple_repeat 2 22 0 1706 147 3 49 chr5 1741261 1741567 -197888583 - AluJb SINE Alu -20 292 1 2299 99 0 3 chr5 1741581 1741894 -197888256 - AluSx SINE Alu 0 312 1 654 316 78 20 chr5 1741965 1742259 -197887891 + L1MEd LINE L1 771 1081 -5038 235 279 83 25 chr5 1742302 1742506 -197887644 + L1MEd LINE L1 1171 1386 -4924 291 242 116 0 chr5 1742512 1742607 -197887543 - L1MEc LINE L1 -5404 992 887 636 321 61 31 chr5 1742636 1743087 -197887063 + L1MEc LINE L1 820 1291 -5430 2169 105 7 0 chr5 1743087 1743383 -197886767 + AluSp SINE Alu 1 298 -15 636 321 61 31 chr5 1743383 1743473 -197886677 + L1MEc LINE L1 1291 1377 -5344 25 51 0 0 chr5 1743491 1743530 -197886620 + AT_rich Low_complexity Low_complexity 1 39 0 1636 158 42 3 chr5 1743561 1743871 -197886279 - MER47A DNA MER2_type -43 323 2 625 309 94 18 chr5 1743875 1744364 -197885786 + L1MEc LINE L1 1342 1867 -4673 3932 140 36 12 chr5 1744366 1745025 -197885125 - L1MA4A LINE L1 -5 7360 6686 11741 177 33 33 chr5 1745026 1745093 -197885057 - L1MA4A LINE L1 -742 6620 6555 2169 125 0 0 chr5 1745093 1745397 -197884753 - AluSx SINE Alu -2 310 7 11741 177 33 33 chr5 1745397 1748536 -197881614 - L1MA4A LINE L1 -807 6555 3418 2490 154 9 37 chr5 1748536 1748972 -197881178 - MSTB LTR MaLR -2 424 1 11741 177 33 33 chr5 1748972 1748998 -197881152 - L1MA4A LINE L1 -3944 3418 3394 560 268 98 5 chr5 1748999 1749193 -197880957 - L1MA4A LINE L1 -5485 1724 1501 * 2137 220 55 0 chr5 1749189 1749680 -197880470 - L1MA4A LINE L1 -6691 518 1 1148 253 85 45 chr5 1749742 1749861 -197880289 + L1MEc LINE L1 1914 2027 -4694 2692 3 0 7 chr5 1749861 1750166 -197879984 + AluYa5 SINE Alu 1 303 -8 1148 253 85 45 chr5 1750166 1750718 -197879432 + L1MEc LINE L1 2027 2612 -4109 1918 238 120 86 chr5 1750763 1751443 -197878707 + L1MEc LINE L1 2669 3407 -3133 2085 110 7 0 chr5 1751443 1751733 -197878417 + AluSx SINE Alu 8 299 -13 1918 238 120 86 chr5 1751733 1752198 -197877952 + L1MEc LINE L1 3407 3854 -2686 279 338 7 7 chr5 1753327 1753466 -197876684 + (TG)n Simple_repeat Simple_repeat 2 140 0 22 0 0 0 chr5 1753486 1753508 -197876642 + AT_rich Low_complexity Low_complexity 1 22 0 612 169 0 0 chr5 1755720 1755850 -197874300 + (TG)n Simple_repeat Simple_repeat 2 131 0 320 235 29 11 chr5 1755933 1755965 -197874185 + MER69 DNA AcHobo 61 91 -2435 2254 106 0 0 chr5 1755965 1756268 -197873882 - AluSc SINE Alu -3 306 4 320 235 29 11 chr5 1756268 1756352 -197873798 + MER69 DNA AcHobo 91 2526 0 306 360 0 0 chr5 1756840 1756965 -197873185 + L1M4 LINE L1 3242 3366 -2780 296 322 0 0 chr5 1757059 1757146 -197873004 + L1M4 LINE L1 3280 3366 -2780 255 299 0 0 chr5 1757169 1757236 -197872914 + L1M4 LINE L1 3300 3366 -2780 333 279 12 0 chr5 1757240 1757326 -197872824 + L1M4 LINE L1 3280 3366 -2780 277 314 12 0 chr5 1757330 1757416 -197872734 + L1M4 LINE L1 3280 3366 -2780 330 279 12 0 chr5 1757420 1757506 -197872644 + L1M4 LINE L1 3280 3366 -2780 * 420 297 7 0 chr5 1757501 1757646 -197872504 - L1M4 LINE L1 -1314 4832 4687 592 120 9 3 chr5 1757652 1757888 -197872262 + AluSp SINE Alu 1 301 -12 1200 223 187 45 chr5 1757891 1758108 -197872042 - L1M4 LINE L1 -1465 4681 4496 1741 183 3 0 chr5 1758108 1758419 -197871731 - AluJb SINE Alu 0 312 1 1200 223 187 45 chr5 1758419 1758723 -197871427 - L1M4 LINE L1 -1650 4496 4237 2045 132 0 0 chr5 1758723 1759026 -197871124 - AluSx SINE Alu -9 303 1 1200 223 187 45 chr5 1759026 1759213 -197870937 - L1M4 LINE L1 -1909 4237 3871 2079 112 14 0 chr5 1759243 1759539 -197870611 - AluSx SINE Alu -12 300 1 1628 224 133 79 chr5 1759869 1760574 -197869576 - LTR1B LTR ERV1 -81 745 3 807 287 45 33 chr5 1760623 1760957 -197869193 - L1ME2 LINE L1 -30 6134 5797 1577 185 207 36 chr5 1760982 1761475 -197868675 + LTR8A LTR ERV1 1 577 -150 1343 286 54 41 chr5 1761475 1761983 -197868167 - L1MDa LINE L1 -4378 2162 1662 2328 84 0 0 chr5 1761983 1762293 -197867857 - AluY SINE Alu -1 310 1 1343 286 54 41 chr5 1762293 1762823 -197867327 - L1MDa LINE L1 -4878 1662 1111 2484 41 0 0 chr5 1762823 1763117 -197867033 - AluY SINE Alu -17 294 1 513 315 47 17 chr5 1763445 1763680 -197866470 - L1MDa LINE L1 -5652 878 637 1578 163 3 18 chr5 1763948 1764231 -197865919 + AluJb SINE Alu 1 279 -33 189 0 0 0 chr5 1764248 1764269 -197865881 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 235 314 83 12 chr5 1764446 1764615 -197865535 - L1MCa LINE L1 -4594 2013 1833 362 22 0 0 chr5 1764646 1764691 -197865459 + MADE1 DNA Mariner 35 79 -1 17596 94 40 26 chr5 1764694 1767234 -197862916 - Charlie3 DNA MER1_type -135 2575 1 306 239 100 30 chr5 1767434 1767668 -197862482 - L1MCa LINE L1 -4879 1547 1282 1186 137 0 0 chr5 1767731 1767945 -197862205 - AluSg/x SINE Alu 0 323 110 1265 86 0 17 chr5 1768282 1768457 -197861693 + AluSg/x SINE Alu 120 291 -19 628 294 60 16 chr5 1773035 1773287 -197856863 + HAL1 LINE L1 19 281 -2226 1753 47 0 5 chr5 1773402 1773617 -197856533 + AluY SINE Alu 82 295 -16 222 91 0 0 chr5 1775566 1775599 -197854551 + (TG)n Simple_repeat Simple_repeat 1 33 0 351 201 75 19 chr5 1775625 1775784 -197854366 + (TG)n Simple_repeat Simple_repeat 1 168 0 242 211 42 21 chr5 1776624 1776719 -197853431 + (CA)n Simple_repeat Simple_repeat 1 97 0 1276 302 67 17 chr5 1776766 1777365 -197852785 + L1MEc LINE L1 125 753 -5643 43669 32 23 1 chr5 1777368 1783384 -197846766 + L1PA3 LINE L1 5 6155 0 382 176 0 0 chr5 1783383 1783451 -197846699 + L1MEc LINE L1 738 805 -5591 * 226 170 0 43 chr5 1783451 1783498 -197846652 + MLT1B LTR MaLR 1 45 -345 1051 97 58 0 chr5 1783530 1783684 -197846466 - AluSg/x SINE Alu -16 294 132 1760 141 61 0 chr5 1783684 1783961 -197846189 - AluSq SINE Alu -19 294 1 486 298 39 12 chr5 1783972 1784227 -197845923 - L1M4 LINE L1 -2305 3841 3580 1867 160 30 24 chr5 1784227 1784800 -197845350 + LTR10E LTR ERV1 1 627 -6 273 128 0 0 chr5 1784800 1784839 -197845311 - L1M4 LINE L1 -2577 3569 3531 * 405 180 7 167 chr5 1784834 1784877 -197845273 + L1ME LINE L1 5558 5606 -560 2148 124 0 6 chr5 1784877 1785191 -197844959 + AluSx SINE Alu 1 312 0 405 180 7 167 chr5 1785191 1785297 -197844853 + L1ME LINE L1 5606 5683 -483 441 259 9 0 chr5 1785410 1785526 -197844624 + L1MA10 LINE L1 6210 6326 -8 24 0 0 0 chr5 1785540 1785564 -197844586 + AT_rich Low_complexity Low_complexity 1 24 0 1925 157 0 0 chr5 1785661 1785961 -197844189 + AluSx SINE Alu 1 300 -12 451 309 47 13 chr5 1785964 1786262 -197843888 + L1MEc LINE L1 1036 1343 -4862 242 303 25 17 chr5 1786431 1786550 -197843600 + L1MEc LINE L1 1512 1631 -4765 205 258 32 0 chr5 1788007 1788069 -197842081 + L2 LINE L2 2306 2369 -945 898 224 0 0 chr5 1789428 1789611 -197840539 - AluJ SINE Alu -9 303 121 787 188 0 0 chr5 1789651 1789779 -197840371 - AluJ SINE Alu -171 141 14 204 40 0 0 chr5 1789795 1789820 -197840330 + (T)n Simple_repeat Simple_repeat 1 25 0 218 40 40 40 chr5 1790181 1790231 -197839919 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 1126 31 0 0 chr5 1790231 1790361 -197839789 - L1PA3 LINE L1 -24 6131 6002 502 188 0 23 chr5 1790918 1791051 -197839099 + CT-rich Low_complexity Low_complexity 4 133 0 248 196 0 36 chr5 1791159 1791215 -197838935 + CT-rich Low_complexity Low_complexity 3 56 0 614 257 59 21 chr5 1791413 1791650 -197838500 - MER33 DNA MER1_type -74 250 5 1325 240 52 3 chr5 1792261 1792623 -197837527 - MER70B LTR ERVL 0 578 199 330 306 45 0 chr5 1792966 1793100 -197837050 - MER70B LTR ERVL -424 154 15 240 35 0 0 chr5 1793166 1793195 -197836955 + (TCCCC)n Simple_repeat Simple_repeat 3 31 0 300 118 71 35 chr5 1843376 1843546 -197786604 + (CA)n Simple_repeat Simple_repeat 1 176 0 380 121 80 12 chr5 1843628 1844048 -197786102 + (CA)n Simple_repeat Simple_repeat 1 448 0 342 119 66 37 chr5 1844588 1844832 -197785318 + (CA)n Simple_repeat Simple_repeat 1 251 0 2668 213 59 6 chr5 1845760 1846386 -197783764 + LTR34 LTR ERV1 1 659 -40 1977 118 0 4 chr5 1846387 1846667 -197783483 + AluSx SINE Alu 1 279 -33 233 204 20 0 chr5 1846791 1846840 -197783310 + LTR34 LTR ERV1 650 699 0 270 237 22 0 chr5 1847442 1847581 -197782569 + G-rich Low_complexity Low_complexity 4 145 0 410 261 6 0 chr5 1847600 1847776 -197782374 + G-rich Low_complexity Low_complexity 3 179 0 374 250 0 0 chr5 1847779 1847895 -197782255 + (CTGGGG)n Simple_repeat Simple_repeat 3 118 0 11278 126 9 21 chr5 1849210 1851006 -197779144 - L1P LINE L1 -4360 1786 11 353 189 19 39 chr5 1852920 1853136 -197777014 + (CACCAT)n Simple_repeat Simple_repeat 1 211 0 420 220 11 40 chr5 1853162 1853339 -197776811 + (CACCAT)n Simple_repeat Simple_repeat 6 177 0 2018 120 0 3 chr5 1855824 1856124 -197774026 - AluSg SINE Alu -11 299 1 1066 298 77 32 chr5 1856378 1856845 -197773305 + L1ME1 LINE L1 5670 6157 -9 513 291 190 51 chr5 1856850 1857043 -197773107 + HAL1 LINE L1 1549 1714 -793 2133 100 3 7 chr5 1857043 1857344 -197772806 + AluSx SINE Alu 1 300 -12 513 291 190 51 chr5 1857344 1857992 -197772158 + HAL1 LINE L1 1714 2507 0 450 310 31 66 chr5 1858268 1858555 -197771595 + MLT1J LTR MaLR 225 501 -10 373 263 49 21 chr5 1859119 1859414 -197770736 + MLT1D LTR MaLR 89 389 -78 872 200 47 0 chr5 1860343 1860513 -197769637 + MER58A DNA MER1_type 46 223 -1 361 224 22 60 chr5 1860617 1860751 -197769399 + L1ME4a LINE L1 5966 6094 -27 2131 99 0 0 chr5 1860753 1861077 -197769073 - AluSx SINE Alu 0 324 1 395 250 0 49 chr5 1861251 1861395 -197768755 + GA-rich Low_complexity Low_complexity 1 137 0 230 150 0 0 chr5 1863546 1863586 -197766564 - MLT1H LTR MaLR -297 298 259 723 228 183 0 chr5 1865640 1865864 -197764286 - L1MB7 LINE L1 -2 6182 5918 2850 92 11 0 chr5 1865877 1866247 -197763903 - THE1C LTR MaLR -1 374 1 427 234 33 3 chr5 1866265 1866430 -197763720 + L1MB7 LINE L1 5683 5855 -329 291 321 0 43 chr5 1868748 1868888 -197761262 - MIR SINE MIR -15 247 114 315 213 0 0 chr5 1869602 1869677 -197760473 + (TG)n Simple_repeat Simple_repeat 2 76 0 542 292 111 58 chr5 1869886 1870129 -197760021 + MLT1J LTR MaLR 245 500 -11 250 327 131 6 chr5 1870536 1870704 -197759446 - MLT1H LTR MaLR -268 281 93 960 248 50 5 chr5 1871133 1871512 -197758638 - L1ME LINE L1 -2805 3275 2880 232 273 80 0 chr5 1871612 1871700 -197758450 - L1ME LINE L1 -4309 1952 1858 407 268 118 75 chr5 1871728 1872521 -197757629 - L1ME LINE L1 -4467 1794 833 1936 130 7 10 chr5 1872521 1872820 -197757330 + AluSx SINE Alu 1 298 -14 407 268 118 75 chr5 1872820 1873142 -197757008 - L1ME LINE L1 -5428 833 526 382 257 64 76 chr5 1873489 1873660 -197756490 - MLT1J2 LTR MaLR -10 440 272 213 314 24 65 chr5 1873877 1874001 -197756149 + L2 LINE L2 3100 3218 -54 276 344 85 27 chr5 1874192 1874416 -197755734 + L2 LINE L2 2572 2808 -506 195 319 44 33 chr5 1874415 1874506 -197755644 + L2 LINE L2 2972 3063 -209 * 193 267 17 17 chr5 1874540 1874600 -197755550 + L2 LINE L2 3180 3239 -74 2549 179 28 13 chr5 1874674 1875131 -197755019 + MLT2B3 LTR ERVL 1 464 -90 217 246 0 0 chr5 1875131 1875188 -197754962 + (TA)n Simple_repeat Simple_repeat 1 57 0 306 256 0 0 chr5 1875188 1875278 -197754872 - L1MC4 LINE L1 -1339 6703 6614 264 149 0 0 chr5 1875365 1875412 -197754738 + (CA)n Simple_repeat Simple_repeat 2 48 0 196 259 0 35 chr5 1875495 1875553 -197754597 + MIR SINE MIR 12 67 -195 215 173 19 0 chr5 1875695 1875747 -197754403 + CT-rich Low_complexity Low_complexity 1 53 0 1122 244 17 27 chr5 1876490 1876785 -197753365 + MLT1E LTR MaLR 302 593 0 234 331 31 39 chr5 1876795 1876925 -197753225 - MLT1L LTR MaLR -426 189 61 236 320 13 0 chr5 1877557 1877635 -197752515 + Tigger3(Golem) DNA MER2_type 1 79 -2950 696 205 53 16 chr5 1877872 1878062 -197752088 + L1MB7 LINE L1 5987 6183 -1 866 159 0 0 chr5 1878141 1878273 -197751877 + FLAM_C SINE Alu 1 132 -11 237 33 0 0 chr5 1878340 1878370 -197751780 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 287 245 136 71 chr5 1878394 1878549 -197751601 + L1MC5 LINE L1 7749 7913 -48 604 292 87 14 chr5 1882045 1882322 -197747828 - MLT1I LTR MaLR 0 409 113 803 271 138 35 chr5 1882595 1882935 -197747215 + MLT1E LTR MaLR 1 375 -218 822 146 0 15 chr5 1882958 1883088 -197747062 - THE1B LTR MaLR -1 363 236 1279 95 0 0 chr5 1883089 1883257 -197746893 + L1PA7 LINE L1 5983 6150 -4 3124 86 2 0 chr5 1883279 1883707 -197746443 - THE1B-int LTR MaLR -1151 429 1 1684 168 75 23 chr5 1883707 1884053 -197746097 - THE1B LTR MaLR 0 364 1 682 271 47 5 chr5 1884058 1884250 -197745900 + MLT1E LTR MaLR 394 593 0 357 331 14 0 chr5 1884257 1884399 -197745751 + MLT1E-int LTR MaLR 15 158 -1213 292 258 56 0 chr5 1884538 1884627 -197745523 + MLT1E-int LTR MaLR 442 535 -836 1820 218 21 42 chr5 1885688 1886165 -197743985 + MLT1C LTR MaLR 1 467 0 21 57 0 0 chr5 1891431 1891466 -197738684 + GC_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr5 1891684 1891717 -197738433 + GC_rich Low_complexity Low_complexity 1 33 0 198 182 26 26 chr5 1893554 1893631 -197736519 + G-rich Low_complexity Low_complexity 3 79 0 26 30 0 0 chr5 1895737 1895770 -197734380 + GC_rich Low_complexity Low_complexity 1 33 0 408 307 0 51 chr5 1896910 1897200 -197732950 + C-rich Low_complexity Low_complexity 1 275 0 22 35 0 0 chr5 1897344 1897373 -197732777 + GC_rich Low_complexity Low_complexity 1 29 0 224 217 0 0 chr5 1898847 1898893 -197731257 + G-rich Low_complexity Low_complexity 5 50 0 2521 37 0 0 chr5 1899131 1899426 -197730724 + AluY SINE Alu 1 295 -16 201 74 0 0 chr5 1900015 1900042 -197730108 + (CCG)n Simple_repeat Simple_repeat 2 28 0 315 71 0 0 chr5 1903641 1903683 -197726467 + (T)n Simple_repeat Simple_repeat 1 42 0 220 204 0 0 chr5 1903888 1903937 -197726213 + CT-rich Low_complexity Low_complexity 5 53 0 232 151 12 70 chr5 1903955 1904041 -197726109 + CT-rich Low_complexity Low_complexity 1 81 0 252 272 10 48 chr5 1904685 1904788 -197725362 + G-rich Low_complexity Low_complexity 2 100 0 360 0 0 0 chr5 1905859 1905899 -197724251 + (CA)n Simple_repeat Simple_repeat 2 41 0 418 222 0 22 chr5 1907173 1907353 -197722797 + (CACG)n Simple_repeat Simple_repeat 4 179 0 485 177 0 43 chr5 1907370 1907556 -197722594 + (CACG)n Simple_repeat Simple_repeat 1 178 0 439 222 0 20 chr5 1907567 1907881 -197722269 + (CACG)n Simple_repeat Simple_repeat 1 307 0 347 233 0 14 chr5 1907915 1908061 -197722089 + (CACG)n Simple_repeat Simple_repeat 4 147 0 320 217 0 43 chr5 1908091 1908275 -197721875 + (CACG)n Simple_repeat Simple_repeat 4 179 0 * 357 263 0 0 chr5 1908268 1908443 -197721707 + (CA)n Simple_repeat Simple_repeat 1 175 0 217 355 0 11 chr5 1908497 1908590 -197721560 + (CA)n Simple_repeat Simple_repeat 1 92 0 222 191 0 0 chr5 1910515 1910557 -197719593 + (CGG)n Simple_repeat Simple_repeat 1 42 0 231 211 26 53 chr5 1912814 1912928 -197717222 + (CA)n Simple_repeat Simple_repeat 2 112 0 268 108 20 138 chr5 1913041 1913236 -197716914 + (CACAG)n Simple_repeat Simple_repeat 1 172 0 262 155 5 102 chr5 1913187 1913374 -197716776 + (CACG)n Simple_repeat Simple_repeat 3 171 0 * 201 222 0 81 chr5 1913405 1913590 -197716560 + (CA)n Simple_repeat Simple_repeat 1 170 0 1032 57 0 0 chr5 1916329 1916452 -197713698 + AluY SINE Alu 1 123 -188 1104 158 0 0 chr5 1916620 1916791 -197713359 + AluJb SINE Alu 135 305 -7 717 253 50 56 chr5 1918857 1919177 -197710973 - MLT2C1 LTR ERVL -65 332 15 218 283 45 34 chr5 1919441 1919585 -197710565 + MIR SINE MIR 62 206 -56 369 367 62 35 chr5 1920332 1920703 -197709447 + L1MDa LINE L1 1864 2244 -3971 2399 194 16 8 chr5 1920704 1921203 -197708947 + L1MC1 LINE L1 5430 5932 -401 1279 188 37 93 chr5 1921194 1921744 -197708406 + L1M3 LINE L1 5065 5582 -601 * 1900 61 0 0 chr5 1921844 1922108 -197708042 + L1HS LINE L1 5892 6155 0 207 69 0 0 chr5 1922108 1922137 -197708013 + (A)n Simple_repeat Simple_repeat 1 29 0 2161 123 7 0 chr5 1922238 1922540 -197707610 + AluSx SINE Alu 1 304 -8 543 291 41 6 chr5 1923299 1923471 -197706679 - MER45A DNA AcHobo 0 178 1 354 138 55 9 chr5 1923755 1923864 -197706286 + CT-rich Low_complexity Low_complexity 4 117 0 27 0 0 0 chr5 1923870 1923897 -197706253 + AT_rich Low_complexity Low_complexity 1 27 0 180 200 25 0 chr5 1925600 1925640 -197704510 - L2 LINE L2 -86 3186 3146 203 344 0 11 chr5 1926811 1926901 -197703249 + (TATG)n Simple_repeat Simple_repeat 1 89 0 243 354 0 22 chr5 1928976 1929157 -197700993 + (CCTA)n Simple_repeat Simple_repeat 2 178 0 803 332 115 46 chr5 1929984 1930849 -197699301 + L1MDa LINE L1 2271 4241 -1974 2189 92 3 23 chr5 1931087 1931391 -197698759 + AluSx SINE Alu 1 298 -14 960 298 74 47 chr5 1932663 1933781 -197696369 - L1ME LINE L1 -486 5684 4533 1097 233 60 6 chr5 1934220 1934537 -197695613 + MLT1A1 LTR MaLR 20 353 -12 1615 254 109 2 chr5 1935555 1936040 -197694110 - MER82 DNA MER2_type -1 652 116 502 226 10 36 chr5 1936375 1936825 -197693325 + (CA)n Simple_repeat Simple_repeat 1 438 0 263 194 39 0 chr5 1936852 1936955 -197693195 + (CA)n Simple_repeat Simple_repeat 1 107 0 408 147 16 79 chr5 1937037 1937227 -197692923 + (CA)n Simple_repeat Simple_repeat 2 179 0 215 326 93 33 chr5 1937884 1938099 -197692051 + L2 LINE L2 2994 3221 -92 1115 266 18 39 chr5 1938772 1939103 -197691047 - MER33 DNA MER1_type 0 324 1 262 293 0 0 chr5 1939128 1939203 -197690947 + MER58 DNA MER1_type 36 110 -105 5035 203 57 21 chr5 1940321 1940589 -197689561 - Tigger3b DNA MER2_type -1816 1212 955 2296 86 0 3 chr5 1940589 1940891 -197689259 + AluY SINE Alu 1 301 -10 5035 203 57 21 chr5 1940891 1941789 -197688361 - Tigger3b DNA MER2_type -2073 955 4 662 228 53 0 chr5 1942314 1942485 -197687665 + MER5A DNA MER1_type 5 184 -5 21 36 0 0 chr5 1942985 1943013 -197687137 + AT_rich Low_complexity Low_complexity 1 28 0 405 304 89 5 chr5 1943117 1943250 -197686900 + Charlie5 DNA MER1_type 2391 2550 -74 1793 161 0 32 chr5 1943250 1943566 -197686584 - AluJb SINE Alu -2 310 5 405 304 89 5 chr5 1943566 1943646 -197686504 + Charlie5 DNA MER1_type 2550 2622 -2 230 340 19 19 chr5 1944069 1944175 -197685975 - L3b LINE CR1 -228 1355 1250 2441 21 0 0 chr5 1944241 1944567 -197685583 - L1HS LINE L1 -2832 3314 2989 * 16883 16 0 0 chr5 1944564 1947399 -197682751 + L1HS LINE L1 3321 6155 0 24 0 0 0 chr5 1947399 1947423 -197682727 + AT_rich Low_complexity Low_complexity 1 24 0 561 161 0 0 chr5 1947530 1947611 -197682539 + AluS SINE Alu 2 82 -231 1334 203 88 34 chr5 1948883 1949055 -197681095 - MLT1B LTR MaLR -16 374 213 2030 110 0 20 chr5 1949055 1949355 -197680795 - AluSg SINE Alu -16 294 1 1334 203 88 34 chr5 1949355 1949536 -197680614 - MLT1B LTR MaLR -177 213 2 2158 116 7 0 chr5 1949978 1950280 -197679870 + AluSx SINE Alu 1 304 -8 435 290 53 24 chr5 1951325 1951532 -197678618 - MLT1H LTR MaLR -4 545 333 400 282 28 14 chr5 1951589 1951767 -197678383 - MLT1H LTR MaLR -381 168 1 359 211 279 42 chr5 1953444 1953634 -197676516 - MLT1E1 LTR MaLR 0 654 420 521 254 101 21 chr5 1953694 1953883 -197676267 - MLT1E1 LTR MaLR -383 271 68 4067 197 11 5 chr5 1955012 1955820 -197674330 + L1MB3 LINE L1 5368 6180 -3 205 195 0 0 chr5 1956152 1956193 -197673957 + A-rich Low_complexity Low_complexity 1 41 0 2594 186 10 46 chr5 1956394 1956481 -197673669 + L1MA8 LINE L1 5260 5349 -942 2721 16 0 0 chr5 1956481 1956787 -197673363 + AluYb8 SINE Alu 3 308 -10 2594 186 10 46 chr5 1956787 1957286 -197672864 + L1MA8 LINE L1 5349 5825 -466 1476 245 90 25 chr5 1957317 1957382 -197672768 + L1MA9 LINE L1 5768 5827 -485 2075 118 0 13 chr5 1957382 1957688 -197672462 + AluSq SINE Alu 1 302 -11 1476 245 90 25 chr5 1957688 1958135 -197672015 + L1MA9 LINE L1 5827 6312 0 32 75 0 0 chr5 1958143 1958210 -197671940 + AT_rich Low_complexity Low_complexity 1 67 0 598 318 37 16 chr5 1958623 1958868 -197671282 + MLT1A1 LTR MaLR 116 365 0 609 261 73 9 chr5 1958874 1959092 -197671058 - MLT1E1 LTR MaLR -5 649 418 362 280 47 35 chr5 1959126 1959311 -197670839 - MLT1E3 LTR MaLR -382 272 79 604 267 101 17 chr5 1961533 1961975 -197668175 + L1ME2 LINE L1 5043 5517 -647 1083 249 22 11 chr5 1961979 1962256 -197667894 - L1MA6 LINE L1 -36 6264 5985 482 362 29 12 chr5 1962270 1962516 -197667634 + L1ME2 LINE L1 5539 5788 -376 667 266 30 94 chr5 1962631 1963003 -197667147 + L1ME2 LINE L1 5804 6151 -13 21 0 0 0 chr5 1963173 1963194 -197666956 + AT_rich Low_complexity Low_complexity 1 21 0 457 174 43 0 chr5 1963287 1963379 -197666771 + MER85 DNA T2_type 32 127 -12 243 292 108 8 chr5 1963494 1963624 -197666526 - MLT1E LTR MaLR -448 145 3 24 32 0 0 chr5 1965565 1965596 -197664554 + AT_rich Low_complexity Low_complexity 1 31 0 1999 100 14 60 chr5 1968261 1968446 -197661704 - THE1C LTR MaLR -40 335 172 2280 94 3 0 chr5 1968446 1968753 -197661397 + AluSg1 SINE Alu 1 308 -1 1999 100 14 60 chr5 1968753 1968918 -197661232 - THE1C LTR MaLR -203 172 1 201 328 0 0 chr5 1970072 1970130 -197660020 - MIR SINE MIR -111 151 94 457 298 82 21 chr5 1970909 1971238 -197658912 - L1ME4a LINE L1 0 6121 5773 474 272 151 8 chr5 1971247 1971486 -197658664 - MLT1C LTR MaLR -8 459 187 760 198 38 17 chr5 1971651 1971861 -197658289 - MLT1C LTR MaLR -176 214 1 1264 246 107 17 chr5 1973310 1973712 -197656438 + MLT1C LTR MaLR 1 438 -29 564 280 24 47 chr5 1974553 1974764 -197655386 + MIR SINE MIR 24 229 -33 608 182 19 71 chr5 1974924 1975078 -197655072 - MLT2D LTR ERVL -8 406 261 972 248 43 14 chr5 1975228 1975510 -197654640 - MLT2D LTR ERVL -108 306 17 286 339 0 0 chr5 1980382 1980509 -197649641 + HERVL LTR ERVL 907 1033 -4621 1541 166 26 12 chr5 1981080 1981567 -197648583 + MER50 LTR ERV1 1 711 -23 1749 177 53 29 chr5 1981568 1981947 -197648203 - MSTC LTR MaLR -40 388 1 548 266 120 66 chr5 1981949 1982283 -197647867 + HERVL LTR ERVL 1678 2029 -3735 222 336 76 0 chr5 1983115 1983234 -197646916 + L2 LINE L2 3183 3310 -3 535 269 62 10 chr5 1984064 1984272 -197645878 + MER20 DNA MER1_type 1 219 0 189 0 0 0 chr5 1985403 1985424 -197644726 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1484 158 57 0 chr5 1990714 1990960 -197639190 - AluJo SINE Alu -9 303 44 1133 303 77 0 chr5 1991262 1991727 -197638423 + L1MC2 LINE L1 5832 6332 -12 554 206 19 7 chr5 1991733 1991888 -197638262 + GA-rich Low_complexity Low_complexity 2 158 0 1072 172 62 10 chr5 1991888 1992097 -197638053 + AluJo SINE Alu 1 220 -92 259 211 13 40 chr5 1993621 1993697 -197636453 + G-rich Low_complexity Low_complexity 3 76 0 271 360 65 13 chr5 1998082 1998235 -197631915 + MIR3 SINE MIR 18 178 -30 332 323 45 0 chr5 1998246 1998401 -197631749 - MLT1B LTR MaLR -2 652 491 334 358 0 15 chr5 1998416 1998550 -197631600 + (CGTG)n Simple_repeat Simple_repeat 4 135 0 477 324 78 70 chr5 1999207 2000233 -197629917 + L1MEc LINE L1 810 1450 -4946 202 270 20 20 chr5 2000366 2000466 -197629684 + (TATATG)n Simple_repeat Simple_repeat 5 104 0 347 256 22 44 chr5 2000536 2000626 -197629524 + L1MC4 LINE L1 6615 6702 -1340 221 381 0 11 chr5 2000628 2000809 -197629341 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 1982 110 29 0 chr5 2001293 2001591 -197628559 + AluSx SINE Alu 1 306 0 431 283 23 34 chr5 2004503 2004680 -197625470 - MLT1C LTR MaLR -227 240 66 2205 102 0 7 chr5 2006176 2006480 -197623670 + AluSp SINE Alu 1 302 -11 911 211 154 0 chr5 2011516 2011795 -197618355 - MLT1B LTR MaLR -68 322 1 21 0 0 0 chr5 2013957 2013978 -197616172 + AT_rich Low_complexity Low_complexity 1 21 0 236 253 0 11 chr5 2014508 2014595 -197615555 + G-rich Low_complexity Low_complexity 3 88 0 3055 238 63 16 chr5 2015349 2015490 -197614660 - Charlie1 DNA MER1_type -2 2759 2626 2044 108 14 0 chr5 2015490 2015777 -197614373 + AluSg SINE Alu 2 292 -18 3055 238 63 16 chr5 2015777 2016182 -197613968 - Charlie1 DNA MER1_type -135 2626 2241 2350 73 0 16 chr5 2016182 2016485 -197613665 - AluSq SINE Alu -15 298 1 3055 238 63 16 chr5 2016485 2016905 -197613245 - Charlie1 DNA MER1_type -520 2241 1747 270 191 0 76 chr5 2017107 2017239 -197612911 + (CCCCG)n Simple_repeat Simple_repeat 1 121 0 768 211 112 12 chr5 2017318 2017560 -197612590 - MLT1A1 LTR MaLR -99 266 1 2070 120 0 0 chr5 2021045 2021351 -197608799 + AluSx SINE Alu 3 308 0 1163 260 65 38 chr5 2021375 2021855 -197608295 + L1MDa LINE L1 20 512 -6028 283 210 49 0 chr5 2021928 2022009 -197608141 + L1MA7 LINE L1 6205 6289 -2 * 596 239 54 33 chr5 2022002 2022134 -197608016 + L1MDa LINE L1 2454 2582 -3958 2057 100 20 13 chr5 2022134 2022434 -197607716 + AluSg SINE Alu 6 307 -3 596 239 54 33 chr5 2022434 2022631 -197607519 + L1MDa LINE L1 2582 2788 -3752 493 287 16 0 chr5 2022631 2022760 -197607390 - ERVL LTR ERVL -3721 2043 1913 775 219 105 4 chr5 2022905 2023143 -197607007 + MLT1C LTR MaLR 13 274 -193 341 324 0 0 chr5 2023450 2023626 -197606524 + GA-rich Low_complexity Low_complexity 4 179 0 554 215 67 53 chr5 2023636 2023845 -197606305 + MLT1C LTR MaLR 256 467 0 346 281 78 39 chr5 2025060 2025188 -197604962 - L1ME4a LINE L1 -11 6110 5978 325 356 11 40 chr5 2025234 2025411 -197604739 - L1MC4a LINE L1 -1896 5912 5741 347 367 41 20 chr5 2025626 2025822 -197604328 - L1MC4a LINE L1 -756 5390 5191 500 352 89 42 chr5 2025824 2026281 -197603869 + L1MDa LINE L1 2417 2889 -3651 232 309 12 0 chr5 2026389 2026470 -197603680 + L1MDa LINE L1 3119 3200 -3340 615 319 112 13 chr5 2026524 2027214 -197602936 + L1MDa LINE L1 3316 4073 -2467 219 286 0 0 chr5 2027470 2027526 -197602624 + C-rich Low_complexity Low_complexity 1 56 0 369 346 134 60 chr5 2027871 2028380 -197601770 - HAL1b LINE L1 -635 1596 208 339 270 0 0 chr5 2028382 2028620 -197601530 + CT-rich Low_complexity Low_complexity 1 238 0 1194 189 84 3 chr5 2030209 2030534 -197599616 + MLT1B LTR MaLR 15 379 -11 355 375 67 47 chr5 2031120 2031461 -197598689 - L1MC4 LINE L1 0 8042 7695 588 304 55 45 chr5 2032159 2032218 -197597932 + L1MC5 LINE L1 6555 6612 -1196 2333 81 3 0 chr5 2032218 2032515 -197597635 - AluSx SINE Alu -14 298 1 588 304 55 45 chr5 2032515 2032871 -197597279 + L1MC5 LINE L1 6612 6902 -906 677 185 71 28 chr5 2032907 2033253 -197596897 + MSTC LTR MaLR 1 427 -1 1376 216 120 40 chr5 2033253 2033902 -197596248 + L1MC5 LINE L1 6994 7694 -267 2466 168 23 12 chr5 2033971 2034399 -197595751 - Tigger2a DNA MER2_type 0 434 2 271 260 76 18 chr5 2037368 2037484 -197592666 + LTR50 LTR ERVL 327 447 -76 2124 165 49 180 chr5 2037827 2038637 -197591513 - L1MB3 LINE L1 0 6183 5480 1804 171 3 3 chr5 2039933 2040238 -197589912 - AluJb SINE Alu -7 305 1 1452 188 124 3 chr5 2040263 2040609 -197589541 + L1MC2 LINE L1 5941 6328 -16 429 260 19 0 chr5 2041856 2041960 -197588190 - MER117 DNA MER1_type -53 144 39 29 28 0 0 chr5 2042814 2042850 -197587300 + AT_rich Low_complexity Low_complexity 1 36 0 234 286 13 0 chr5 2044968 2045045 -197585105 + L1MC4 LINE L1 7960 8037 -5 591 248 170 47 chr5 2047022 2047430 -197582720 - MLT1H1 LTR MaLR 0 555 44 188 228 18 0 chr5 2048190 2048247 -197581903 + (TG)n Simple_repeat Simple_repeat 2 59 0 520 271 67 5 chr5 2049057 2049261 -197580889 - MER20 DNA MER1_type 0 219 4 239 328 106 29 chr5 2049281 2049629 -197580521 - LTR16C LTR ERVL -36 455 81 1272 184 104 12 chr5 2050449 2050776 -197579374 + MLT1A1 LTR MaLR 1 357 -8 473 249 110 29 chr5 2052210 2052383 -197577767 + MER58A DNA MER1_type 35 221 -3 1900 142 0 34 chr5 2052583 2052906 -197577244 + AluSx SINE Alu 1 312 0 1870 158 10 0 chr5 2053409 2053706 -197576444 + AluJb SINE Alu 1 300 -12 1258 252 102 21 chr5 2053787 2054219 -197575931 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr5 2054238 2054260 -197575890 + AT_rich Low_complexity Low_complexity 1 22 0 4703 87 17 17 chr5 2055422 2056056 -197574094 - MER51A LTR ERV1 0 634 1 354 325 163 0 chr5 2056918 2057084 -197573066 - MIR SINE MIR -7 255 63 312 180 36 18 chr5 2057229 2057340 -197572810 + (CAGAGA)n Simple_repeat Simple_repeat 1 113 0 180 333 61 8 chr5 2059359 2059491 -197570659 - L2 LINE L2 -812 2502 2364 2083 104 7 0 chr5 2059605 2059893 -197570257 - AluSx SINE Alu -22 290 1 197 310 133 5 chr5 2060678 2060881 -197569269 - L2 LINE L2 -1102 2212 1984 2016 115 0 33 chr5 2061201 2061506 -197568644 + AluSx SINE Alu 1 295 -17 391 321 19 19 chr5 2062350 2062512 -197567638 + (CGTG)n Simple_repeat Simple_repeat 1 162 0 221 263 25 12 chr5 2062520 2062600 -197567550 + (TG)n Simple_repeat Simple_repeat 1 81 0 352 241 0 14 chr5 2063470 2063615 -197566535 + (CTGGGG)n Simple_repeat Simple_repeat 1 143 0 2309 171 18 2 chr5 2063986 2064383 -197565767 + MER57A LTR ERV1 1 403 0 1018 247 87 20 chr5 2067187 2067543 -197562607 - MLT1B LTR MaLR -7 383 4 308 272 48 32 chr5 2068516 2068641 -197561509 - L1ME4a LINE L1 -6 6115 5989 373 242 0 0 chr5 2068803 2068894 -197561256 - L1ME4a LINE L1 -204 5960 5870 * 2556 269 35 34 chr5 2068892 2069791 -197560359 - L1M4 LINE L1 -1946 4200 3207 1725 183 0 10 chr5 2069791 2070103 -197560047 - AluSx SINE Alu -3 309 1 2556 269 35 34 chr5 2070103 2070350 -197559800 - L1M4 LINE L1 -2939 3207 2962 23 0 0 0 chr5 2070456 2070479 -197559671 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 2070666 2070688 -197559462 + AT_rich Low_complexity Low_complexity 1 22 0 1612 171 0 4 chr5 2070690 2070953 -197559197 - AluJb SINE Alu -33 279 18 2117 116 3 0 chr5 2070964 2071266 -197558884 - AluSx SINE Alu -9 303 1 388 310 97 57 chr5 2071306 2071744 -197558406 - L1 LINE L1 -2742 3404 2804 1170 196 108 6 chr5 2072891 2073298 -197556852 + LTR45B LTR ERV1 3 603 0 181 262 115 0 chr5 2074056 2074117 -197556033 - MIR SINE MIR -75 133 66 2187 278 48 2 chr5 2074827 2075468 -197554682 - L1MB5 LINE L1 0 6174 5504 401 86 38 153 chr5 2075885 2076208 -197553942 + (CGGTG)n Simple_repeat Simple_repeat 1 285 0 1914 130 0 11 chr5 2078574 2078882 -197551268 - AluSx SINE Alu 0 305 1 1242 183 108 37 chr5 2078883 2079178 -197550972 - MLT2C2 LTR ERVL -146 318 3 241 236 138 41 chr5 2079213 2079336 -197550814 + MLT1J LTR MaLR 277 411 -100 749 119 0 2 chr5 2082861 2083105 -197547045 + AluSx SINE Alu 1 294 -16 476 310 26 0 chr5 2085170 2085325 -197544825 - MER58A DNA MER1_type -23 201 43 1094 129 0 0 chr5 2085586 2085733 -197544417 + AluSg/x SINE Alu 154 300 -12 369 109 0 0 chr5 2085733 2085788 -197544362 + (TA)n Simple_repeat Simple_repeat 1 55 0 38 39 0 0 chr5 2085796 2085848 -197544302 + AT_rich Low_complexity Low_complexity 1 52 0 246 331 57 57 chr5 2085880 2086176 -197543974 - L1MC/D LINE L1 -1944 5864 5569 359 302 75 72 chr5 2086185 2086519 -197543631 - HAL1 LINE L1 -968 1539 1205 231 254 55 18 chr5 2086584 2086694 -197543456 - L1MEd LINE L1 -5059 1060 947 2356 73 0 33 chr5 2086830 2087133 -197543017 + AluSg SINE Alu 1 293 -17 2118 106 3 3 chr5 2087900 2088212 -197541938 - AluSx SINE Alu 0 312 1 239 325 42 16 chr5 2088703 2088894 -197541256 + L1M4 LINE L1 5202 5397 -749 1134 247 47 6 chr5 2089863 2090203 -197539947 - MLT1A1 LTR MaLR 0 365 12 2176 128 6 6 chr5 2090393 2090705 -197539445 + AluSx SINE Alu 1 312 0 2165 123 7 0 chr5 2090922 2091207 -197538943 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr5 2092695 2092717 -197537433 + GC_rich Low_complexity Low_complexity 1 22 0 253 275 0 78 chr5 2093483 2093650 -197536500 + G-rich Low_complexity Low_complexity 3 156 0 284 287 127 45 chr5 2094631 2094875 -197535275 - L1MC4a LINE L1 -1487 6321 6058 1763 154 10 23 chr5 2094898 2095204 -197534946 - AluJo SINE Alu -8 304 3 304 329 87 24 chr5 2096173 2096425 -197533725 - L1MC/D LINE L1 -588 5574 5307 362 254 34 96 chr5 2097698 2097875 -197532275 + MLT1C LTR MaLR 1 166 -224 193 130 0 74 chr5 2098370 2098424 -197531726 + (TTACG)n Simple_repeat Simple_repeat 4 53 0 925 188 96 135 chr5 2100714 2101070 -197529080 - MLT1C LTR MaLR -42 425 7 7197 160 96 8 chr5 2101568 2103292 -197526858 + L1MCa LINE L1 17 1984 -4442 3286 222 31 6 chr5 2103287 2103380 -197526770 + L1MCa LINE L1 3222 3311 -3115 * 2174 130 0 10 chr5 2103380 2103680 -197526470 + AluSx SINE Alu 1 297 -15 3286 222 31 6 chr5 2103680 2104532 -197525618 + L1MCa LINE L1 3311 4190 -2236 703 150 21 21 chr5 2104593 2104733 -197525417 + L1MC1 LINE L1 2043 2182 -4244 4843 187 49 61 chr5 2104745 2107175 -197522975 + L1MC1 LINE L1 4217 8065 0 356 211 21 11 chr5 2109069 2109164 -197520986 + MER53 DNA DNA 23 118 -71 227 286 157 40 chr5 2109178 2109503 -197520647 + MLT1C LTR MaLR 116 478 -71 2203 113 7 3 chr5 2110803 2111103 -197519047 + AluSx SINE Alu 1 301 -11 485 262 167 40 chr5 2111991 2112361 -197517789 + MER31A LTR ERV1 7 427 -39 4886 84 20 55 chr5 2112693 2113409 -197516741 - LTR8 LTR ERV1 0 691 1 544 203 23 16 chr5 2113777 2113905 -197516245 + MER5B DNA MER1_type 1 129 -49 3942 256 64 9 chr5 2114222 2115479 -197514671 - L1MEc LINE L1 -807 5408 4082 3725 261 35 32 chr5 2115477 2117902 -197512248 - L1MEc LINE L1 -2576 3639 1258 * 1370 288 110 0 chr5 2117884 2118384 -197511766 - L1MEc LINE L1 -5555 841 287 * 426 181 96 0 chr5 2118408 2118502 -197511648 - MLT1B LTR MaLR 0 390 288 1826 146 173 19 chr5 2118502 2118873 -197511277 - MSTA LTR MaLR 0 428 1 1543 236 95 31 chr5 2118873 2119547 -197510603 - MER97a DNA MER1_type? -11 883 167 21 36 0 0 chr5 2121046 2121074 -197509076 + AT_rich Low_complexity Low_complexity 1 28 0 272 68 23 0 chr5 2122018 2122062 -197508088 - MADE1 DNA Mariner 0 80 36 344 100 0 0 chr5 2122102 2122152 -197507998 + MADE1 DNA Mariner 31 80 0 27 49 0 0 chr5 2122745 2122786 -197507364 + AT_rich Low_complexity Low_complexity 1 41 0 1998 111 4 4 chr5 2123228 2123499 -197506651 + AluSq SINE Alu 26 296 -17 2160 59 0 0 chr5 2124513 2124768 -197505382 - AluY SINE Alu -3 308 54 349 159 0 133 chr5 2124844 2124957 -197505193 + L1MCa LINE L1 1967 2064 -4362 342 229 0 62 chr5 2124924 2125020 -197505130 - L1MC4 LINE L1 -1339 6703 6614 * 250 312 79 11 chr5 2125021 2125300 -197504850 - L1ME4a LINE L1 -155 5966 5669 1898 174 43 34 chr5 2125307 2125855 -197504295 - MLT2A2 LTR ERVL 0 554 1 2921 217 117 8 chr5 2125869 2126721 -197503429 - L1MB5 LINE L1 0 6174 5231 1770 125 14 7 chr5 2126743 2127023 -197503127 + THE1B LTR MaLR 83 364 0 4664 221 25 29 chr5 2127023 2127347 -197502803 - L1MB5 LINE L1 -907 5239 4915 204 40 0 0 chr5 2127347 2127372 -197502778 + (TTA)n Simple_repeat Simple_repeat 3 27 0 4664 221 25 29 chr5 2127372 2128305 -197501845 - L1MB5 LINE L1 -1231 4915 3987 754 167 8 8 chr5 2331367 2331493 -197298657 + MER49 LTR ERV1 10 135 -788 1516 194 77 119 chr5 2331493 2332074 -197298076 - LTR1B LTR ERV1 0 826 284 249 278 159 20 chr5 2335102 2335253 -197294897 - LTR16B LTR ERVL -4 460 289 603 229 13 0 chr5 2335261 2335499 -197294651 + GA-rich Low_complexity Low_complexity 1 241 0 250 318 122 0 chr5 2336255 2336362 -197293788 + L2 LINE L2 3153 3272 0 580 318 66 3 chr5 2336861 2337147 -197293003 + L1ME3A LINE L1 5548 5851 -319 331 295 0 0 chr5 2338429 2338524 -197291626 + (CA)n Simple_repeat Simple_repeat 2 96 0 411 261 0 0 chr5 2339720 2340131 -197290019 + (TG)n Simple_repeat Simple_repeat 1 411 0 237 237 136 0 chr5 2340905 2340964 -197289186 + L2 LINE L2 3204 3270 -2 196 188 31 0 chr5 2342396 2342460 -197287690 + (TG)n Simple_repeat Simple_repeat 1 66 0 1211 265 131 23 chr5 2342782 2343209 -197286941 + MLT1E LTR MaLR 121 593 0 2070 120 0 3 chr5 2343420 2343728 -197286422 + AluSq SINE Alu 1 307 -6 628 174 14 28 chr5 2343905 2344218 -197285932 + GA-rich Low_complexity Low_complexity 1 308 0 2715 171 37 70 chr5 2345187 2346055 -197284095 - L1MCa LINE L1 -3981 2445 1332 3209 64 5 0 chr5 2346080 2346488 -197283662 - L1PA7 LINE L1 -4 6150 5741 437 311 14 0 chr5 2346549 2346697 -197283453 + Charlie2 DNA MER1_type 2670 2819 -43 2095 90 28 3 chr5 2346703 2346992 -197283158 + AluSc SINE Alu 1 296 -13 2339 123 2 73 chr5 2347453 2347851 -197282299 - L1PA13 LINE L1 -289 5874 5505 1337 148 3 67 chr5 2348493 2348824 -197281326 - AluSx SINE Alu 0 312 3 345 251 11 11 chr5 2349813 2349992 -197280158 + (CA)n Simple_repeat Simple_repeat 1 179 0 340 366 6 0 chr5 2350065 2350281 -197279869 + (CA)n Simple_repeat Simple_repeat 1 217 0 2259 84 3 0 chr5 2350583 2350880 -197279270 + AluSp SINE Alu 1 298 -15 266 268 14 0 chr5 2350881 2350952 -197279198 - MER53 DNA DNA -117 72 1 1546 228 56 18 chr5 2351117 2351564 -197278586 - MLT1C LTR MaLR 0 467 4 2202 93 6 10 chr5 2352367 2352679 -197277471 + AluY SINE Alu 1 311 0 183 204 0 0 chr5 2354538 2354582 -197275568 + (TG)n Simple_repeat Simple_repeat 1 44 0 225 277 59 10 chr5 2354643 2354744 -197275406 + MER88 LTR ERVL 79 184 -280 * 257 337 24 12 chr5 2354655 2354824 -197275326 - MER74B LTR ERVL -74 548 378 236 254 17 0 chr5 2354838 2354897 -197275253 - MER74A LTR ERVL -293 265 206 394 203 0 0 chr5 2355125 2355199 -197274951 + AluJ SINE Alu 49 122 -180 258 171 26 13 chr5 2355199 2355275 -197274875 + (TA)n Simple_repeat Simple_repeat 1 77 0 831 199 0 17 chr5 2355276 2355452 -197274698 + AluJ SINE Alu 125 297 -15 373 365 15 0 chr5 2356385 2356543 -197273607 - MIR SINE MIR -62 146 15 395 345 40 17 chr5 2356752 2356926 -197273224 + MER5B DNA MER1_type 1 178 0 23 78 0 0 chr5 2358727 2358778 -197271372 + AT_rich Low_complexity Low_complexity 1 51 0 22 56 0 0 chr5 2359186 2359222 -197270928 + AT_rich Low_complexity Low_complexity 1 36 0 1733 160 17 3 chr5 2359493 2359787 -197270363 - AluJb SINE Alu -14 298 1 1846 114 66 79 chr5 2360670 2361048 -197269102 - THE1C LTR MaLR -2 373 1 1341 215 48 100 chr5 2361687 2362166 -197267984 + MLT1C LTR MaLR 6 459 -8 1206 174 4 17 chr5 2364253 2364494 -197265656 - L1MA3 LINE L1 0 6305 6068 285 350 17 8 chr5 2365278 2365395 -197264755 - MIR3 SINE MIR -53 155 38 245 73 0 24 chr5 2365504 2365545 -197264605 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 10103 29 2 0 chr5 2365545 2367476 -197262674 - L1PA3 LINE L1 -24 6131 4199 438 259 51 0 chr5 2370239 2370397 -197259753 - L1M4 LINE L1 -1638 4508 4343 1286 307 77 10 chr5 2371174 2371877 -197258273 + L1M4 LINE L1 3104 3853 -2293 892 185 70 182 chr5 2371877 2372632 -197257518 + MER4A LTR ERV1 1 870 -2 6174 183 25 70 chr5 2372659 2373540 -197256610 + L1MC1 LINE L1 1 920 -5506 258 32 0 0 chr5 2373540 2373571 -197256579 + (CA)n Simple_repeat Simple_repeat 2 32 0 6174 183 25 70 chr5 2373571 2374045 -197256105 + L1MC1 LINE L1 920 1286 -5140 6898 62 9 2 chr5 2374045 2375211 -197254939 + L1PA7 LINE L1 4979 6150 -4 6174 183 25 70 chr5 2375211 2375341 -197254809 + L1MC1 LINE L1 1286 1420 -5006 5036 227 85 42 chr5 2375326 2376124 -197254026 + L1MC1 LINE L1 1685 2446 -3980 * 291 154 19 0 chr5 2376124 2376176 -197253974 + LTR23 LTR ERV1 306 358 -79 5036 227 85 42 chr5 2376176 2378206 -197251944 + L1MC1 LINE L1 2446 4685 -1741 1738 199 55 19 chr5 2378215 2378632 -197251518 + MSTB1 LTR MaLR 1 432 0 2263 66 3 7 chr5 2378661 2378963 -197251187 + AluY SINE Alu 1 301 -10 388 219 0 0 chr5 2378970 2379034 -197251116 + MLT1D LTR MaLR 125 188 -317 4635 156 66 7 chr5 2379079 2379917 -197250233 + ERVL-B3 LTR ERVL 4871 5757 -7 1784 200 15 151 chr5 2379917 2380530 -197249620 + MLT2B3 LTR ERVL 1 408 -36 * 4644 199 79 14 chr5 2380524 2381337 -197248813 + L1MC1 LINE L1 4871 5630 -983 2003 124 48 0 chr5 2381337 2381627 -197248523 + AluSq SINE Alu 1 304 -9 4644 199 79 14 chr5 2381627 2382442 -197247708 + L1MC1 LINE L1 5630 6602 -11 554 255 136 53 chr5 2382446 2382764 -197247386 + L1M4 LINE L1 4067 4441 -1705 2272 89 0 0 chr5 2382764 2383070 -197247080 + AluY SINE Alu 1 306 0 554 255 136 53 chr5 2383070 2383236 -197246914 + L1M4 LINE L1 4441 4592 -1554 1441 76 0 0 chr5 2383623 2383795 -197246355 + AluSg/x SINE Alu 124 295 -17 249 262 16 0 chr5 2384235 2384296 -197245854 + MER45 DNA AcHobo 61 122 -56 942 185 75 5 chr5 2389201 2389401 -197240749 + L1MA4A LINE L1 5555 5768 -535 231 164 0 0 chr5 2389401 2389456 -197240694 - LTR66 LTR ERVL -162 448 394 551 131 0 4 chr5 2389498 2389599 -197240551 - L1MC/D LINE L1 -560 5682 5585 289 0 49 0 chr5 2389604 2389645 -197240505 + (TA)n Simple_repeat Simple_repeat 2 44 0 2266 156 78 11 chr5 2389646 2390120 -197240030 + L1MA4A LINE L1 5795 6300 -3 197 279 114 13 chr5 2391356 2391435 -197238715 + L2 LINE L2 3208 3294 -19 2023 122 3 20 chr5 2392791 2393086 -197237064 - AluSx SINE Alu 0 312 23 366 362 7 7 chr5 2393141 2393279 -197236871 + MER5B DNA MER1_type 35 172 -6 203 322 67 0 chr5 2398446 2398536 -197231614 + L2 LINE L2 3172 3267 -5 182 367 20 10 chr5 2398607 2398705 -197231445 - MIR SINE MIR -6 256 158 243 0 0 0 chr5 2399049 2399076 -197231074 + (TA)n Simple_repeat Simple_repeat 2 28 0 2268 65 65 0 chr5 2400718 2401010 -197229140 + AluY SINE Alu 1 311 0 193 311 77 46 chr5 2402769 2402965 -197227185 - L2 LINE L2 -490 2824 2623 429 343 50 15 chr5 2404013 2404354 -197225796 - HERV16 LTR ERVL -1217 4547 4195 697 294 81 15 chr5 2405020 2405353 -197224797 - HERV16 LTR ERVL -3845 1151 797 216 260 0 0 chr5 2405365 2405415 -197224735 + (TG)n Simple_repeat Simple_repeat 2 51 0 3064 145 19 6 chr5 2406669 2407194 -197222956 - L1MA2 LINE L1 0 6304 5773 1376 241 20 0 chr5 2408303 2408651 -197221499 - MLT1A1 LTR MaLR -2 363 9 2350 110 3 0 chr5 2408685 2408986 -197221164 + AluSp SINE Alu 1 302 -11 2213 113 0 0 chr5 2409226 2409519 -197220631 - AluSx SINE Alu -17 295 3 279 263 11 11 chr5 2410507 2410686 -197219464 + (CA)n Simple_repeat Simple_repeat 1 179 0 337 376 0 0 chr5 2410777 2410955 -197219195 + (CA)n Simple_repeat Simple_repeat 2 179 0 341 278 0 6 chr5 2410987 2411167 -197218983 + (CA)n Simple_repeat Simple_repeat 2 180 0 286 269 13 0 chr5 2411208 2411286 -197218864 + (CA)n Simple_repeat Simple_repeat 1 79 0 226 260 16 0 chr5 2411307 2411434 -197218716 + (CA)n Simple_repeat Simple_repeat 1 129 0 518 226 36 48 chr5 2412183 2412351 -197217799 + MER5A DNA MER1_type 2 167 -22 2019 131 35 26 chr5 2413745 2414089 -197216061 + THE1B LTR MaLR 18 364 0 1741 171 0 46 chr5 2414112 2414439 -197215711 + AluSx SINE Alu 1 312 0 4165 116 4 48 chr5 2415063 2415745 -197214405 + L1PA13 LINE L1 5505 6156 -7 2265 108 3 16 chr5 2415881 2416223 -197213927 - AluSq SINE Alu 0 313 1 257 363 80 55 chr5 2417207 2417496 -197212654 - L2 LINE L2 -1 3271 2976 315 332 87 23 chr5 2417737 2418129 -197212021 - L2 LINE L2 -646 2668 2252 491 266 42 60 chr5 2418272 2418606 -197211544 - MLT1D LTR MaLR -177 328 1 358 231 0 0 chr5 2418784 2418862 -197211288 - MLT1K LTR MaLR -61 527 450 281 218 72 4 chr5 2419517 2419606 -197210544 - MLT1J LTR MaLR -288 189 74 1273 173 35 35 chr5 2421179 2421463 -197208687 + L1MA5 LINE L1 6017 6300 0 957 253 104 20 chr5 2421480 2421836 -197208314 + MLT1C LTR MaLR 80 465 -2 239 274 71 12 chr5 2422542 2422626 -197207524 + L2 LINE L2 3185 3273 -40 258 81 0 0 chr5 2427931 2427968 -197202182 + (CA)n Simple_repeat Simple_repeat 2 38 0 2247 117 3 3 chr5 2429197 2429505 -197200645 - AluSx SINE Alu -4 308 1 234 228 89 41 chr5 2431704 2431827 -197198323 + L1ME4a LINE L1 5992 6120 -1 25 31 0 0 chr5 2432314 2432346 -197197804 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr5 2432379 2432407 -197197743 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr5 2432897 2432942 -197197208 + AT_rich Low_complexity Low_complexity 1 45 0 219 217 22 0 chr5 2434014 2434060 -197196090 - L2 LINE L2 -16 3256 3210 2058 95 32 14 chr5 2434156 2434485 -197195665 + AluSq SINE Alu 5 313 0 24 0 0 0 chr5 2434575 2434599 -197195551 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 2437499 2437521 -197192629 + AT_rich Low_complexity Low_complexity 1 22 0 675 160 0 0 chr5 2438027 2438133 -197192017 - AluSc SINE Alu -6 303 198 1425 94 6 0 chr5 2438133 2438314 -197191836 + AluSc SINE Alu 9 190 -119 233 282 0 24 chr5 2441360 2441445 -197188705 + GA-rich Low_complexity Low_complexity 2 84 0 21 0 0 0 chr5 2441546 2441567 -197188583 + AT_rich Low_complexity Low_complexity 1 21 0 222 91 0 0 chr5 2444249 2444282 -197185868 + (TC)n Simple_repeat Simple_repeat 2 34 0 200 209 23 0 chr5 2447698 2447741 -197182409 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 638 132 48 12 chr5 2447748 2447915 -197182235 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 490 133 31 8 chr5 2447942 2448070 -197182080 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 3016 136 21 14 chr5 2448099 2448615 -197181535 - HSMAR2 DNA Mariner -2 1300 781 247 265 34 17 chr5 2448666 2448783 -197181367 + L1MEd LINE L1 990 1108 -5011 2439 174 31 0 chr5 2449713 2450128 -197180022 - MSTA LTR MaLR 0 428 1 229 294 11 0 chr5 2450924 2451016 -197179134 + L1MEd LINE L1 2833 2925 -3204 25 65 0 0 chr5 2451147 2451193 -197178957 + AT_rich Low_complexity Low_complexity 1 46 0 316 281 81 25 chr5 2451431 2451591 -197178559 - MIR SINE MIR 0 262 94 231 179 26 13 chr5 2451685 2451763 -197178387 + (TA)n Simple_repeat Simple_repeat 1 79 0 316 325 68 16 chr5 2451804 2452053 -197178097 + L1M4 LINE L1 5069 5330 -816 1479 255 3 3 chr5 2452278 2452635 -197177515 + L1PB4 LINE L1 5795 6151 -5 378 228 104 41 chr5 2452685 2452953 -197177197 - L1M4 LINE L1 -3057 3089 2805 * 875 288 18 0 chr5 2452950 2453228 -197176922 - L1ME2 LINE L1 -187 5977 5695 578 214 132 31 chr5 2453344 2453565 -197176585 - Charlie2 DNA MER1_type -106 2756 2490 1926 146 7 7 chr5 2453565 2453866 -197176284 + AluSx SINE Alu 1 301 -11 578 214 132 31 chr5 2453866 2453971 -197176179 - Charlie2 DNA MER1_type -372 2490 2397 410 279 268 4 chr5 2453977 2454246 -197175904 - Charlie2b DNA MER1_type -1748 1034 695 219 167 0 0 chr5 2454277 2454319 -197175831 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 1441 206 62 62 chr5 2454428 2454637 -197175513 - MLT1A2 LTR MaLR 0 374 163 896 167 0 0 chr5 2454637 2454769 -197175381 - FLAM_C SINE Alu -1 132 1 1441 206 62 62 chr5 2454769 2454933 -197175217 - MLT1A2 LTR MaLR -210 164 1 298 282 130 0 chr5 2454937 2455068 -197175082 - Charlie2b DNA MER1_type -2207 575 428 356 360 20 0 chr5 2455099 2455249 -197174901 - Charlie2b DNA MER1_type -2544 318 166 533 232 34 11 chr5 2455250 2455427 -197174723 + L1MEc LINE L1 2168 2348 -4048 292 217 0 0 chr5 2455429 2455489 -197174661 + AluJ/monomer SINE Alu 241 300 -2 737 259 102 32 chr5 2455503 2455877 -197174273 + L1MEc LINE L1 2303 2702 -3513 348 189 90 115 chr5 2455882 2455929 -197174221 - MSTC LTR MaLR -242 123 76 2133 110 7 7 chr5 2455929 2456220 -197173930 - AluSp SINE Alu -22 291 1 348 189 90 115 chr5 2456220 2456294 -197173856 - MSTC LTR MaLR -289 76 5 21 36 0 0 chr5 2458134 2458162 -197171988 + AT_rich Low_complexity Low_complexity 1 28 0 1704 194 42 35 chr5 2458383 2458812 -197171338 - L1 LINE L1 -816 5330 4899 255 252 55 84 chr5 2458812 2459050 -197171100 + MLT1H LTR MaLR 221 451 -98 448 326 57 6 chr5 2459552 2459727 -197170423 + MIR SINE MIR 43 226 -36 1867 144 92 23 chr5 2461223 2461571 -197168579 + THE1C LTR MaLR 1 372 -3 689 164 4 0 chr5 2462090 2462322 -197167828 + (CA)n Simple_repeat Simple_repeat 1 233 0 270 293 140 25 chr5 2462378 2462535 -197167615 - MIR SINE MIR -10 252 78 23 33 0 0 chr5 2463970 2464000 -197166150 + AT_rich Low_complexity Low_complexity 1 30 0 1810 231 25 104 chr5 2464608 2465328 -197164822 + L1ME2 LINE L1 4615 5277 -869 815 212 0 0 chr5 2465337 2465483 -197164667 - FRAM SINE Alu -21 155 10 2229 246 60 29 chr5 2465501 2465989 -197164161 + L1ME2 LINE L1 5282 5804 -360 2849 104 8 8 chr5 2465989 2466364 -197163786 + THE1C LTR MaLR 1 375 0 2229 246 60 29 chr5 2466364 2466646 -197163504 + L1ME2 LINE L1 5804 6076 -88 194 250 40 53 chr5 2470341 2470417 -197159733 + L2 LINE L2 1634 1708 -1606 1578 183 3 13 chr5 2470448 2470775 -197159375 + AluJo SINE Alu 1 312 0 1209 140 5 5 chr5 2471251 2471444 -197158706 - L1PA13 LINE L1 -5 6158 5966 1464 117 2 14 chr5 2471444 2471718 -197158432 + L1PA12 LINE L1 5754 6017 -114 664 315 247 3 chr5 2471755 2472390 -197157760 + L2 LINE L2 2186 2975 -339 353 201 141 67 chr5 2473174 2473323 -197156827 + L1MC4 LINE L1 7688 7847 -195 4774 225 53 39 chr5 2473396 2473961 -197156189 + L1MD1 LINE L1 1136 1692 -4848 1608 174 48 61 chr5 2473961 2474340 -197155810 + MLT1A2 LTR MaLR 1 374 0 4774 225 53 39 chr5 2474340 2475282 -197154868 + L1MD1 LINE L1 1692 2623 -3917 1863 159 6 25 chr5 2475282 2475404 -197154746 + AluSx SINE Alu 1 124 -188 351 0 0 0 chr5 2475404 2475443 -197154707 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1863 159 6 25 chr5 2475443 2475635 -197154515 + AluSx SINE Alu 124 309 -3 4774 225 53 39 chr5 2475635 2475946 -197154204 + L1MD1 LINE L1 2623 2928 -3612 325 167 0 0 chr5 2475967 2476021 -197154129 - LTR16C LTR ERVL -30 461 408 1444 267 17 8 chr5 2476063 2476538 -197153612 + L1MD1 LINE L1 2959 3437 -3103 1400 243 41 10 chr5 2476531 2476732 -197153418 + L1MD1 LINE L1 5964 6157 -405 * 779 191 0 22 chr5 2476732 2476868 -197153282 + FLAM_C SINE Alu 1 133 0 1400 243 41 10 chr5 2476868 2477073 -197153077 + L1MD1 LINE L1 6157 6380 -182 735 164 37 22 chr5 2477081 2477215 -197152935 + FLAM_C SINE Alu 2 137 -6 453 275 35 7 chr5 2477328 2477470 -197152680 + LTR16C LTR ERVL 316 461 -30 2542 219 9 6 chr5 2477659 2478192 -197151958 - MLT1-int LTR MaLR -835 536 2 21 36 0 0 chr5 2478360 2478388 -197151762 + AT_rich Low_complexity Low_complexity 1 28 0 3064 198 18 36 chr5 2478524 2478700 -197151450 + L1MB3 LINE L1 5446 5624 -559 1575 167 16 46 chr5 2478700 2478835 -197151315 + AluJb SINE Alu 1 138 -174 2024 138 7 0 chr5 2478835 2479132 -197151018 + AluSx SINE Alu 3 301 -11 1575 167 16 46 chr5 2479132 2479301 -197150849 + AluJb SINE Alu 138 296 -16 3064 198 18 36 chr5 2479301 2479797 -197150353 + L1MB3 LINE L1 5624 6106 -77 21 36 0 0 chr5 2480041 2480069 -197150081 + AT_rich Low_complexity Low_complexity 1 28 0 403 279 58 19 chr5 2481257 2481465 -197148685 + MER20 DNA MER1_type 1 216 -3 2498 58 0 29 chr5 2481687 2482000 -197148150 - AluY SINE Alu -7 304 1 499 293 82 47 chr5 2482162 2482650 -197147500 - L2 LINE L2 -208 3064 2556 1879 171 3 0 chr5 2482859 2483158 -197146992 - AluJo SINE Alu -12 300 1 210 71 0 0 chr5 2483681 2483709 -197146441 + (TG)n Simple_repeat Simple_repeat 1 28 0 305 275 58 72 chr5 2483711 2483849 -197146301 - L2 LINE L2 0 3272 3137 488 226 80 0 chr5 2485026 2485163 -197144987 - L1ME1 LINE L1 -65 6101 5954 1490 193 51 10 chr5 2485298 2485594 -197144556 - AluJb SINE Alu -4 308 1 2565 169 55 29 chr5 2485702 2486006 -197144144 + MER7C DNA MER2_type 40 366 -2662 2265 83 0 64 chr5 2486006 2486333 -197143817 - AluSq SINE Alu -7 306 1 2565 169 55 29 chr5 2486333 2486577 -197143573 + MER7C DNA MER2_type 366 602 0 21 0 0 0 chr5 2486818 2486839 -197143311 + AT_rich Low_complexity Low_complexity 1 21 0 1495 268 106 19 chr5 2488471 2489086 -197141064 + L1MCa LINE L1 21 688 -5738 1558 215 95 23 chr5 2491519 2491565 -197138585 - MLT2C2 LTR ERVL -1 463 422 285 98 0 0 chr5 2491565 2491606 -197138544 + (CA)n Simple_repeat Simple_repeat 2 42 0 1558 215 95 23 chr5 2491606 2491991 -197138159 - MLT2C2 LTR ERVL -42 422 1 183 80 0 0 chr5 2492193 2492218 -197137932 + (TG)n Simple_repeat Simple_repeat 2 26 0 1981 156 0 13 chr5 2492964 2493278 -197136872 + AluJb SINE Alu 1 310 -2 33 25 0 0 chr5 2493323 2493363 -197136787 + AT_rich Low_complexity Low_complexity 1 40 0 2759 32 0 0 chr5 2493813 2494121 -197136029 - AluY SINE Alu -3 308 1 27 49 0 0 chr5 2495602 2495643 -197134507 + AT_rich Low_complexity Low_complexity 1 41 0 697 259 49 5 chr5 2496009 2496214 -197133936 - MER20 DNA MER1_type -5 214 1 2149 134 3 0 chr5 2496742 2497049 -197133101 + AluSg SINE Alu 1 308 -2 565 301 75 84 chr5 2497198 2497738 -197132412 + L1MC/D LINE L1 5245 5780 -747 24 32 0 0 chr5 2498011 2498042 -197132108 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 2498773 2498794 -197131356 + AT_rich Low_complexity Low_complexity 1 21 0 270 136 0 0 chr5 2498941 2498985 -197131165 + (T)n Simple_repeat Simple_repeat 1 44 0 22 56 0 0 chr5 2499272 2499308 -197130842 + AT_rich Low_complexity Low_complexity 1 36 0 180 158 0 0 chr5 2499521 2499559 -197130591 + (TG)n Simple_repeat Simple_repeat 2 39 0 396 0 0 0 chr5 2501836 2501880 -197128270 + (CA)n Simple_repeat Simple_repeat 2 45 0 672 36 0 0 chr5 2505322 2505405 -197124745 + (TC)n Simple_repeat Simple_repeat 2 84 0 2310 42 0 0 chr5 2507618 2507882 -197122268 + AluY SINE Alu 40 303 -8 1950 169 80 3 chr5 2508119 2508492 -197121658 + MER57A LTR ERV1 2 403 0 2144 122 0 3 chr5 2508640 2508935 -197121215 - AluSq SINE Alu -15 298 5 2655 34 7 0 chr5 2509364 2509662 -197120488 - AluY SINE Alu -11 300 1 24 0 0 0 chr5 2509725 2509749 -197120401 + AT_rich Low_complexity Low_complexity 1 24 0 2023 147 0 10 chr5 2509751 2510064 -197120086 + AluSg SINE Alu 1 310 0 1916 138 56 30 chr5 2510084 2510388 -197119762 + AluJb SINE Alu 1 312 0 1032 70 0 0 chr5 2510558 2510687 -197119463 - AluY SINE Alu -6 305 177 1988 137 0 3 chr5 2511486 2511779 -197118371 + AluJo SINE Alu 14 305 -7 2133 148 0 0 chr5 2511806 2512153 -197117997 + AluSq SINE Alu 1 347 0 182 405 0 0 chr5 2512176 2512250 -197117900 - MIR SINE MIR -12 250 177 219 36 0 0 chr5 2514055 2514083 -197116067 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 492 304 170 37 chr5 2514227 2514685 -197115465 - L2 LINE L2 -365 2949 2431 741 143 24 18 chr5 2516374 2516542 -197113608 + G-rich Low_complexity Low_complexity 2 170 0 205 104 0 42 chr5 2516556 2516604 -197113546 + (GGGGA)n Simple_repeat Simple_repeat 4 49 0 1868 159 10 0 chr5 2520645 2520971 -197109179 - AluSx SINE Alu 0 312 1 1367 230 7 3 chr5 2523063 2523367 -197106783 + MLT1A1 LTR MaLR 1 305 -60 214 169 31 0 chr5 2523544 2523609 -197106541 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 391 313 129 16 chr5 2523609 2523919 -197106231 + HAL1 LINE L1 858 1202 -1305 2175 97 40 3 chr5 2524417 2524716 -197105434 - AluY SINE Alu -1 310 1 288 125 18 0 chr5 2526551 2526607 -197103543 - L1PB2 LINE L1 -3 6148 6092 2243 105 10 0 chr5 2526609 2526903 -197103247 - AluSg SINE Alu -11 299 3 1012 227 122 34 chr5 2528371 2528766 -197101384 + MLT1C LTR MaLR 2 390 0 2326 105 0 0 chr5 2529017 2529312 -197100838 - AluSx SINE Alu -17 295 1 1905 128 7 0 chr5 2530940 2531229 -197098921 + AluSx SINE Alu 1 291 -21 211 68 0 68 chr5 2531232 2531276 -197098874 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1735 47 5 0 chr5 2531815 2532029 -197098121 + L1PA4 LINE L1 5940 6154 -1 1568 44 0 0 chr5 2532555 2532738 -197097412 + L1PA5 LINE L1 5964 6146 -8 591 276 116 24 chr5 2532788 2533158 -197096992 - MLT1I LTR MaLR -1 408 5 2161 93 7 0 chr5 2533530 2533819 -197096331 - AluSx SINE Alu -21 291 1 2135 139 0 0 chr5 2534590 2534900 -197095250 - AluSx SINE Alu -1 311 2 964 201 126 57 chr5 2534926 2535259 -197094891 + MLT1A1 LTR MaLR 4 359 -6 1678 122 30 19 chr5 2535260 2535531 -197094619 - L1MB2 LINE L1 -41 6130 5857 7849 214 56 19 chr5 2535535 2537033 -197093117 - L1MB2 LINE L1 -631 5552 3946 2221 106 3 0 chr5 2537033 2537335 -197092815 - AluSp SINE Alu -10 303 1 7849 214 56 19 chr5 2537335 2538131 -197092019 - L1MB2 LINE L1 -2237 3946 3181 246 222 32 0 chr5 2538461 2538524 -197091626 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 633 323 69 41 chr5 2538567 2538957 -197091193 - MLT1I LTR MaLR -2 407 7 379 292 169 64 chr5 2539039 2539460 -197090690 + L1ME LINE L1 5272 5736 -430 1426 178 108 93 chr5 2541469 2541604 -197088546 + MLT2C2 LTR ERVL 1 132 -332 843 120 0 24 chr5 2541604 2541729 -197088421 - FLAM_C SINE Alu -11 122 1 1426 178 108 93 chr5 2541729 2541992 -197088158 + MLT2C2 LTR ERVL 132 405 -59 288 120 0 0 chr5 2542039 2542089 -197088061 + (CA)n Simple_repeat Simple_repeat 2 51 0 21 0 0 0 chr5 2543976 2543997 -197086153 + AT_rich Low_complexity Low_complexity 1 21 0 799 205 15 19 chr5 2543997 2544202 -197085948 - L1MA9 LINE L1 -37 6275 6072 259 100 60 0 chr5 2544612 2544662 -197085488 - L1MA9 LINE L1 -241 6071 6019 2713 130 17 9 chr5 2545808 2546230 -197083920 - MSTA LTR MaLR 0 428 4 238 184 102 0 chr5 2546301 2546350 -197083800 + L2 LINE L2 3213 3266 -6 26 88 0 0 chr5 2546938 2547006 -197083144 + AT_rich Low_complexity Low_complexity 1 68 0 378 340 48 14 chr5 2548115 2548262 -197081888 - MIR SINE MIR -4 258 107 25 0 0 0 chr5 2548943 2548968 -197081182 + AT_rich Low_complexity Low_complexity 1 25 0 1794 126 48 0 chr5 2548976 2549268 -197080882 + AluSx SINE Alu 1 305 0 1774 244 125 70 chr5 2549340 2550053 -197080097 + MER21B LTR ERV1 1 752 -111 183 80 0 0 chr5 2550069 2550094 -197080056 + (A)n Simple_repeat Simple_repeat 1 25 0 184 373 63 0 chr5 2550208 2550350 -197079800 + MIR SINE MIR 28 178 -84 359 242 0 11 chr5 2550504 2550595 -197079555 - MLT1A2 LTR MaLR -114 276 187 197 139 23 0 chr5 2550604 2550647 -197079503 + GA-rich Low_complexity Low_complexity 1 44 0 369 209 131 69 chr5 2550652 2550813 -197079337 - MLT1A2 LTR MaLR -217 173 3 5914 118 17 1 chr5 2550860 2552063 -197078087 + L1PA13 LINE L1 4961 6158 -5 1985 129 3 0 chr5 2552063 2552373 -197077777 + AluSx SINE Alu 1 311 -1 248 307 64 21 chr5 2553697 2553837 -197076313 - LTR67 LTR ERVL -4 553 408 1768 141 32 0 chr5 2555255 2555539 -197074611 + AluSx SINE Alu 1 293 -19 294 125 0 0 chr5 2555539 2555587 -197074563 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 1103 119 6 0 chr5 2555589 2555765 -197074385 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 200 278 69 0 chr5 2555846 2555918 -197074232 + MIR3 SINE MIR 115 191 -17 213 65 0 0 chr5 2556114 2556145 -197074005 + (CA)n Simple_repeat Simple_repeat 2 32 0 188 297 16 0 chr5 2556935 2556999 -197073151 + MIR SINE MIR 194 258 -4 660 256 61 17 chr5 2558411 2558734 -197071416 + MER31B LTR ERV1 2 661 0 600 244 31 12 chr5 2559452 2559612 -197070538 - L1MD3 LINE L1 -13 7982 7820 681 261 168 28 chr5 2559635 2559836 -197070314 + L1MC4a LINE L1 7299 7555 -253 1727 188 5 72 chr5 2559836 2560250 -197069900 - MLT1B LTR MaLR -4 386 1 681 261 168 28 chr5 2560250 2560339 -197069811 + L1MC4a LINE L1 7555 7630 -178 2215 110 0 0 chr5 2560351 2560652 -197069498 - AluSg SINE Alu -9 301 1 2492 117 14 0 chr5 2561480 2561839 -197068311 + THE1B LTR MaLR 1 364 0 467 290 134 44 chr5 2561885 2562451 -197067699 - L1ME4a LINE L1 -240 5881 5265 2282 76 0 3 chr5 2562763 2563065 -197067085 - AluY SINE Alu -10 301 1 273 57 0 0 chr5 2564699 2564734 -197065416 + (A)n Simple_repeat Simple_repeat 1 35 0 393 241 52 9 chr5 2566658 2566774 -197063376 + L1MC3 LINE L1 7019 7139 -646 2061 220 70 55 chr5 2566808 2567480 -197062670 + L1MD3 LINE L1 7314 7995 0 1500 149 23 62 chr5 2568118 2568426 -197061724 + AluJb SINE Alu 1 296 -16 568 259 202 3 chr5 2568855 2569226 -197060924 + Charlie2 DNA MER1_type 1886 2330 -532 346 239 128 13 chr5 2569272 2569506 -197060644 + Charlie2 DNA MER1_type 2402 2662 -200 3428 35 2 0 chr5 2569593 2569995 -197060155 - L1PA5 LINE L1 -11 6143 5741 437 311 14 0 chr5 2570056 2570204 -197059946 + Charlie2 DNA MER1_type 2670 2819 -43 2095 90 28 3 chr5 2570210 2570499 -197059651 + AluSc SINE Alu 1 296 -13 29 0 0 0 chr5 2573039 2573068 -197057082 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 2576816 2576851 -197053299 + AT_rich Low_complexity Low_complexity 1 35 0 239 212 15 0 chr5 2578057 2578123 -197052027 - L1ME4a LINE L1 -12 6109 6043 213 154 0 0 chr5 2578687 2578726 -197051424 + (CA)n Simple_repeat Simple_repeat 1 39 0 673 210 84 0 chr5 2578837 2579004 -197051146 - L1ME4a LINE L1 -501 5663 5483 315 258 107 67 chr5 2579014 2579239 -197050911 + L1MEd LINE L1 861 1094 -5025 618 156 10 15 chr5 2579242 2579448 -197050702 + (TAGA)n Simple_repeat Simple_repeat 1 205 0 203 197 28 28 chr5 2582374 2582445 -197047705 + (TA)n Simple_repeat Simple_repeat 1 71 0 195 167 0 0 chr5 2582446 2582488 -197047662 + (CA)n Simple_repeat Simple_repeat 1 42 0 435 85 37 0 chr5 2582651 2582733 -197047417 + (CA)n Simple_repeat Simple_repeat 1 85 0 371 106 15 0 chr5 2582878 2582944 -197047206 + (CA)n Simple_repeat Simple_repeat 1 67 0 224 188 38 25 chr5 2583036 2583116 -197047034 + (TA)n Simple_repeat Simple_repeat 1 81 0 306 87 0 0 chr5 2583117 2583163 -197046987 + (CA)n Simple_repeat Simple_repeat 1 46 0 3403 144 44 72 chr5 2583175 2583898 -197046252 - Tigger3b DNA MER2_type 0 1231 529 3363 200 2 0 chr5 2583898 2584543 -197045607 - L1P LINE L1 -1632 4514 3869 635 146 45 0 chr5 2584543 2584649 -197045501 + L1PA13 LINE L1 6034 6148 -15 3419 254 28 7 chr5 2584667 2585595 -197044555 + L1M4 LINE L1 4005 4952 -1194 2295 188 120 12 chr5 2586006 2586496 -197043654 - Tigger3b DNA MER2_type -688 543 1 615 278 78 39 chr5 2586502 2586833 -197043317 - MLT2C1 LTR ERVL -51 346 3 1672 217 30 2 chr5 2590955 2591360 -197038790 - L1MC1 LINE L1 -1 6332 5917 263 170 0 0 chr5 2591360 2591407 -197038743 - MLT2B2 LTR ERVL 0 515 469 702 202 0 0 chr5 2591407 2591585 -197038565 + (CA)n Simple_repeat Simple_repeat 1 178 0 474 251 0 0 chr5 2591597 2591760 -197038390 + (CA)n Simple_repeat Simple_repeat 2 164 0 580 241 77 91 chr5 2591804 2592157 -197037993 - MLT2B2 LTR ERVL -65 349 2 873 239 198 6 chr5 2592211 2592525 -197037625 - MLT1A2 LTR MaLR 0 374 1 1552 220 3 3 chr5 2592547 2592861 -197037289 - L1MC1 LINE L1 -479 5854 5541 1677 79 130 58 chr5 2592941 2593218 -197036932 - AluSp SINE Alu -15 298 2 233 227 0 0 chr5 2594242 2594286 -197035864 + (CCA)n Simple_repeat Simple_repeat 3 46 0 571 232 211 0 chr5 2594296 2594490 -197035660 - MIR SINE MIR -18 244 10 959 246 159 36 chr5 2597115 2597555 -197032595 + MLT1D LTR MaLR 5 498 -7 217 289 96 19 chr5 2597559 2597663 -197032487 - MIR SINE MIR -40 222 111 251 232 0 98 chr5 2599744 2599826 -197030324 - MIR SINE MIR -112 150 77 227 261 43 0 chr5 2600766 2600835 -197029315 - L2 LINE L2 -621 2693 2622 2004 208 42 62 chr5 2602161 2602689 -197027461 - LTR9 LTR ERV1 -95 517 1 659 254 23 17 chr5 2602693 2602870 -197027280 - MLT1A1 LTR MaLR -185 180 3 2052 118 0 9 chr5 2602879 2603194 -197026956 - AluSq SINE Alu -1 312 1 272 222 91 30 chr5 2603212 2603311 -197026839 - MER103 DNA DNA -45 121 17 28 0 0 0 chr5 2603463 2603491 -197026659 + AT_rich Low_complexity Low_complexity 1 28 0 403 218 0 73 chr5 2603509 2603619 -197026531 + MER58 DNA MER1_type 2318 2419 -1 3426 251 85 65 chr5 2604125 2604898 -197025252 + L1ME2 LINE L1 2771 3527 -2637 1396 141 45 0 chr5 2604898 2605118 -197025032 + MER30 DNA MER1_type 1 230 0 3426 251 85 65 chr5 2605118 2605947 -197024203 + L1ME2 LINE L1 3527 4338 -1826 2258 86 7 0 chr5 2605947 2606249 -197023901 + AluSg SINE Alu 1 304 -6 3426 251 85 65 chr5 2606249 2607962 -197022188 + L1ME2 LINE L1 4338 6157 -7 477 0 0 0 chr5 2607962 2608015 -197022135 + (CA)n Simple_repeat Simple_repeat 2 54 0 488 268 94 54 chr5 2609757 2609981 -197020169 + MLT1E LTR MaLR 8 240 -353 1770 250 23 69 chr5 2609988 2610639 -197019511 - MER74B LTR ERVL -1 621 1 930 243 55 16 chr5 2610645 2610900 -197019250 + MLT1E LTR MaLR 329 593 0 213 224 35 17 chr5 2611443 2611501 -197018649 + MIR SINE MIR 108 166 -96 630 322 105 10 chr5 2611513 2611904 -197018246 - MER110 LTR ERV1 -1 490 63 1326 287 58 9 chr5 2612942 2613377 -197016773 - MLT1E2 LTR MaLR 0 626 169 1409 251 90 14 chr5 2613377 2613800 -197016350 + MLT1C LTR MaLR 1 455 -12 528 225 94 7 chr5 2613804 2613942 -197016208 - MLT1E2 LTR MaLR -466 160 11 317 217 169 0 chr5 2613957 2614040 -197016110 - MIR SINE MIR -61 201 105 3489 159 10 26 chr5 2616429 2616864 -197013286 + MER50 LTR ERV1 135 559 -175 2361 83 0 3 chr5 2616864 2617176 -197012974 - AluY SINE Alu 0 311 1 3489 159 10 26 chr5 2617176 2617350 -197012800 + MER50 LTR ERV1 559 734 0 1883 131 14 7 chr5 2619230 2619521 -197010629 + AluSx SINE Alu 3 295 -17 552 30 0 0 chr5 2619521 2619587 -197010563 + (GGAA)n Simple_repeat Simple_repeat 2 67 0 674 243 141 41 chr5 2671173 2671662 -196958488 - MER34 LTR ERV1 0 542 5 2028 76 45 24 chr5 2671724 2672012 -196958138 + AluY SINE Alu 17 310 -1 512 274 85 71 chr5 2672088 2672576 -196957574 - MLT1H LTR MaLR -7 542 1 2269 91 3 0 chr5 2673068 2673364 -196956786 + AluY SINE Alu 1 297 -14 223 246 82 27 chr5 2673744 2673854 -196956296 + L2 LINE L2 1722 1837 -1477 1615 282 63 17 chr5 2673948 2674797 -196955353 - L1ME3 LINE L1 -88 6143 5221 664 301 95 4 chr5 2674851 2674989 -196955161 - L1ME3 LINE L1 -1622 4593 4469 605 268 58 10 chr5 2674989 2675194 -196954956 + MER58C DNA MER1_type 1 215 0 664 301 95 4 chr5 2675194 2675527 -196954623 - L1ME3 LINE L1 -1746 4469 4079 329 172 0 0 chr5 2675563 2675621 -196954529 - Alu SINE Alu -3 299 242 769 177 61 0 chr5 2675621 2675768 -196954382 - L1PA16 LINE L1 -45 6121 5966 * 1316 316 18 15 chr5 2675763 2676438 -196953712 - L1ME3 LINE L1 -2162 4053 3377 485 304 84 24 chr5 2676443 2677423 -196952727 - L1ME3 LINE L1 -4027 2369 1254 435 163 0 0 chr5 2677480 2677560 -196952590 + CT-rich Low_complexity Low_complexity 2 81 0 181 267 0 50 chr5 2679063 2679123 -196951027 + L2 LINE L2 3216 3272 0 186 43 0 0 chr5 2680546 2680569 -196949581 + (CA)n Simple_repeat Simple_repeat 1 23 0 186 237 26 40 chr5 2680604 2680680 -196949470 + MIR SINE MIR 65 139 -69 33 25 0 0 chr5 2681767 2681807 -196948343 + AT_rich Low_complexity Low_complexity 1 40 0 430 292 81 6 chr5 2682629 2682790 -196947360 - MLT1I LTR MaLR -144 265 93 1852 161 137 11 chr5 2682919 2683299 -196946851 + MSTA LTR MaLR 1 428 0 2180 105 10 0 chr5 2684271 2684565 -196945585 - AluSp SINE Alu -16 297 1 2129 99 11 11 chr5 2684565 2684847 -196945303 - AluSx SINE Alu -10 302 21 378 325 113 29 chr5 2686200 2687005 -196943145 - L1M4 LINE L1 -1101 5045 4173 2282 106 7 7 chr5 2688257 2688559 -196941591 - AluSq SINE Alu -11 302 1 259 354 0 0 chr5 2691020 2691119 -196939031 + MIR SINE MIR 140 238 -24 1920 96 44 11 chr5 2691128 2691419 -196938731 + AluY SINE Alu 1 300 0 212 200 20 0 chr5 2692189 2692239 -196937911 + (AATAG)n Simple_repeat Simple_repeat 4 54 0 232 180 73 62 chr5 2692463 2692641 -196937509 + (TG)n Simple_repeat Simple_repeat 1 180 0 461 316 128 47 chr5 2693470 2694038 -196936112 + L1MC4a LINE L1 5025 5634 -755 21 36 0 0 chr5 2694077 2694105 -196936045 + AT_rich Low_complexity Low_complexity 1 28 0 318 335 34 25 chr5 2694176 2694415 -196935735 + L1MC4a LINE L1 5737 5977 -1831 24 32 0 0 chr5 2696144 2696175 -196933975 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr5 2696549 2696569 -196933581 + (T)n Simple_repeat Simple_repeat 1 20 0 1186 220 57 31 chr5 2700355 2700758 -196929392 - MLT1B LTR MaLR -1 373 9 360 197 14 0 chr5 2701081 2701152 -196928998 - MER1B DNA MER1_type -139 158 87 529 200 21 15 chr5 2701564 2701710 -196928440 - MER1B DNA MER1_type -182 115 1 490 312 70 34 chr5 2703167 2703465 -196926685 + MER58B DNA MER1_type 10 318 -23 693 243 101 30 chr5 2703583 2703879 -196926271 - LTR54B LTR ERV1 -2 496 180 189 107 0 0 chr5 2704360 2704388 -196925762 + (CAA)n Simple_repeat Simple_repeat 3 30 0 388 265 5 69 chr5 2705485 2705746 -196924404 + GA-rich Low_complexity Low_complexity 1 244 0 37 99 0 0 chr5 2705966 2706087 -196924063 + AT_rich Low_complexity Low_complexity 1 121 0 664 273 61 63 chr5 2707708 2707850 -196922300 + MLT1C LTR MaLR 43 184 -283 2441 77 0 0 chr5 2707850 2708150 -196922000 + AluY SINE Alu 3 302 -9 664 273 61 63 chr5 2708150 2708417 -196921733 + MLT1C LTR MaLR 184 451 -16 212 371 71 0 chr5 2709489 2709629 -196920521 - MIR SINE MIR -21 241 92 186 43 0 0 chr5 2709996 2710019 -196920131 + (GA)n Simple_repeat Simple_repeat 2 24 0 187 191 128 0 chr5 2711727 2711774 -196918376 + L2 LINE L2 2394 2446 -868 1494 235 37 18 chr5 2712318 2712701 -196917449 + MLT1B LTR MaLR 1 390 0 2325 114 0 9 chr5 2712758 2713073 -196917077 + AluSx SINE Alu 1 312 0 2500 54 0 3 chr5 2713959 2714255 -196915895 - AluY SINE Alu -15 296 2 288 143 0 0 chr5 2714387 2714443 -196915707 + (CCCTAA)n Simple_repeat Simple_repeat 1 56 0 222 62 0 0 chr5 2716713 2716745 -196913405 + (CA)n Simple_repeat Simple_repeat 2 33 0 1069 78 0 48 chr5 2719097 2719263 -196910887 + MER30B DNA MER1_type 23 180 -10 355 244 33 0 chr5 2719585 2719675 -196910475 - MER81 DNA DNA 0 114 22 1309 202 133 22 chr5 2719767 2720182 -196909968 + MLT1C LTR MaLR 7 467 0 1513 118 36 5 chr5 2720623 2720844 -196909306 - MER30 DNA MER1_type 0 230 3 708 145 90 24 chr5 2721196 2721353 -196908797 - MLT2C1 LTR ERVL -40 480 199 22 35 0 0 chr5 2722290 2722319 -196907831 + AT_rich Low_complexity Low_complexity 1 29 0 29 47 0 0 chr5 2722415 2722458 -196907692 + AT_rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr5 2723589 2723610 -196906540 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 4859 216 33 48 chr5 2724466 2726023 -196904127 + Looper DNA T2_type 1 1534 -24 324 0 0 0 chr5 2726024 2726060 -196904090 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1741 215 146 30 chr5 2726071 2726537 -196903613 - MLT2B1 LTR ERVL 0 520 1 188 200 17 0 chr5 2726906 2726966 -196903184 + GA-rich Low_complexity Low_complexity 2 62 0 360 245 31 10 chr5 2728034 2728132 -196902018 + MER69 DNA AcHobo 41 140 -2386 189 0 0 0 chr5 2728601 2728622 -196901528 + (T)n Simple_repeat Simple_repeat 1 21 0 727 265 71 36 chr5 2729105 2729497 -196900653 + MLT1C LTR MaLR 60 465 -2 3943 116 20 3 chr5 2731121 2731725 -196898425 - L1PA13 LINE L1 -4 6159 5546 21 0 0 0 chr5 2731823 2731844 -196898306 + AT_rich Low_complexity Low_complexity 1 21 0 492 152 0 103 chr5 2732407 2732552 -196897598 + MER96B DNA MER1_type? 238 367 -50 309 300 0 42 chr5 2733334 2733454 -196896696 - L2 LINE L2 -2 3311 3197 2151 139 0 7 chr5 2733745 2734055 -196896095 + AluSx SINE Alu 1 308 -4 306 182 106 15 chr5 2734508 2734574 -196895576 + MIR3 SINE MIR 110 181 -27 707 197 34 11 chr5 2735111 2735289 -196894861 + MER96B DNA MER1_type? 2 183 -234 1608 196 68 46 chr5 2735893 2736346 -196893804 - MER31B LTR ERV1 0 466 4 210 341 57 48 chr5 2737485 2737714 -196892436 - L2 LINE L2 -638 2676 2446 23 0 0 0 chr5 2737786 2737809 -196892341 + AT_rich Low_complexity Low_complexity 1 23 0 540 323 72 26 chr5 2737809 2738224 -196891926 + L1MC/D LINE L1 4160 4593 -1553 433 327 92 58 chr5 2739155 2739656 -196890494 + L1MC/D LINE L1 5307 5824 -1984 26 64 0 0 chr5 2740471 2740518 -196889632 + AT_rich Low_complexity Low_complexity 1 47 0 803 244 117 7 chr5 2740631 2740938 -196889212 - MER2 DNA MER2_type -3 341 1 237 148 140 0 chr5 2740941 2741008 -196889142 + MIR SINE MIR 53 141 -67 22 0 0 0 chr5 2741154 2741176 -196888974 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 2741327 2741355 -196888795 + AT_rich Low_complexity Low_complexity 1 28 0 1831 23 5 0 chr5 2741866 2742083 -196888067 - L1PA4 LINE L1 0 6155 5938 202 265 0 0 chr5 2743250 2743299 -196886851 + GA-rich Low_complexity Low_complexity 1 49 0 1178 251 28 3 chr5 2743894 2744257 -196885893 - L1MB1 LINE L1 0 6168 5798 360 258 118 39 chr5 2745211 2745389 -196884761 - L3 LINE CR1 -231 1346 1155 222 216 0 20 chr5 2748101 2748152 -196881998 - L2 LINE L2 -2 3311 3262 320 319 35 0 chr5 2749823 2749939 -196880211 - MIR SINE MIR -108 154 35 255 312 51 13 chr5 2750956 2751113 -196879037 + MER103 DNA DNA 2 164 -2 466 222 31 8 chr5 2751272 2751446 -196878704 + MER61B LTR ERV1 1 105 -320 1412 179 36 11 chr5 2751516 2751795 -196878355 + MER61D LTR ERV1 216 501 0 1864 119 141 28 chr5 2752747 2753074 -196877076 + THE1B LTR MaLR 1 364 0 1654 215 74 17 chr5 2754754 2755172 -196874978 + MLT2B1 LTR ERVL 1 442 -78 1583 287 20 33 chr5 2756540 2757139 -196873011 + L1M2b LINE L1 14 604 -6605 594 241 48 35 chr5 2757337 2757547 -196872603 + L1M2b LINE L1 1685 1881 -5328 3695 210 16 47 chr5 2757683 2758958 -196871192 + L1M2b LINE L1 2162 3396 -3812 806 185 0 0 chr5 2758961 2759107 -196871043 + Tigger1 DNA MER2_type 1 146 -2272 1090 172 5 18 chr5 2759107 2759328 -196870822 + Tigger1 DNA MER2_type 2201 2418 0 9951 193 27 5 chr5 2759331 2761631 -196868519 + L1M2b LINE L1 3406 5757 -1451 864 177 43 22 chr5 2761634 2761866 -196868284 + L1MA5 LINE L1 3972 4208 -3000 573 135 10 0 chr5 2761856 2761960 -196868190 + L1MA5 LINE L1 5753 5857 -1351 * 5087 169 21 24 chr5 2761940 2763515 -196866635 + L1MA5 LINE L1 5789 7357 -5 1383 124 44 26 chr5 2763928 2764154 -196865996 - MER30 DNA MER1_type 0 230 1 2114 146 7 3 chr5 2764514 2764823 -196865327 + AluSx SINE Alu 3 312 0 21 0 0 0 chr5 2766792 2766813 -196863337 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 2766897 2766918 -196863232 + AT_rich Low_complexity Low_complexity 1 21 0 634 305 72 90 chr5 2768866 2769688 -196860462 + L1MDa LINE L1 1236 2042 -4498 9340 104 2 3 chr5 2769872 2772031 -196858119 + L1PA8 LINE L1 4014 6172 0 428 266 62 41 chr5 2772168 2772382 -196857768 + L1MDa LINE L1 2537 2760 -3780 866 94 78 0 chr5 2772382 2772510 -196857640 - MER85 DNA T2_type -1 138 1 428 266 62 41 chr5 2772510 2772585 -196857565 + L1MDa LINE L1 2760 2832 -3708 249 296 19 0 chr5 2772594 2772702 -196857448 - L1M4 LINE L1 -3570 2576 2467 406 264 111 0 chr5 2772838 2773046 -196857104 + L1MDa LINE L1 3176 3406 -3134 1466 160 33 4 chr5 2773048 2773323 -196856827 + L1PA16 LINE L1 5869 6151 -15 866 81 8 0 chr5 2773335 2773458 -196856692 - L1PB1 LINE L1 0 6151 6028 3644 256 79 51 chr5 2773547 2776241 -196853909 - L1M4 LINE L1 -554 5866 3030 1737 178 3 0 chr5 2776241 2776527 -196853623 - AluJb SINE Alu -22 290 4 3644 256 79 51 chr5 2776527 2776795 -196853355 - L1M4 LINE L1 -3390 3030 2771 279 173 0 0 chr5 2776819 2776871 -196853279 - L1MB8 LINE L1 -12 6166 6115 1139 154 125 38 chr5 2776872 2777112 -196853038 - Tigger2 DNA MER2_type -173 2545 1 3464 171 75 8 chr5 2777112 2777861 -196852289 - L1MB7 LINE L1 -86 6098 5300 764 251 137 57 chr5 2777828 2778479 -196851671 - L1M4c LINE L1 -3602 2780 2183 * 3788 60 6 2 chr5 2778479 2778947 -196851203 - L1PA5 LINE L1 -7 6147 5678 764 251 137 57 chr5 2778947 2779435 -196850715 - L1M4c LINE L1 -4199 2183 1455 2224 120 0 0 chr5 2780179 2780479 -196849671 - AluSx SINE Alu -12 300 1 2087 123 7 13 chr5 2781237 2781538 -196848612 - AluSg SINE Alu -11 299 1 421 284 125 85 chr5 2782315 2782772 -196847378 - MLT1H LTR MaLR -2 547 73 357 231 0 66 chr5 2782910 2783001 -196847149 - L2 LINE L2 0 3313 3229 183 271 17 0 chr5 2784502 2784561 -196845589 - MIR SINE MIR -66 142 83 254 230 0 23 chr5 2784773 2784860 -196845290 + (CATA)n Simple_repeat Simple_repeat 2 86 0 451 262 21 35 chr5 2786122 2786263 -196843887 + MLT1I LTR MaLR 247 385 -24 493 273 83 46 chr5 2786442 2787214 -196842936 + L1MEc LINE L1 2131 2893 -3322 358 182 0 0 chr5 2787245 2787300 -196842850 + Tigger5 DNA MER2_type 1 55 -2268 318 173 13 53 chr5 2787269 2787344 -196842806 + Tigger5 DNA MER2_type 2251 2322 -1 * 238 198 40 69 chr5 2787361 2787462 -196842688 + L1MEc LINE L1 2924 3021 -3194 202 303 174 0 chr5 2787462 2787594 -196842556 - MIR SINE MIR -12 250 96 2686 33 0 3 chr5 2787682 2787989 -196842161 + AluY SINE Alu 1 306 -5 596 264 45 80 chr5 2787999 2788571 -196841579 + L1MEc LINE L1 3469 4020 -2195 35 24 0 0 chr5 2788574 2788616 -196841534 + AT_rich Low_complexity Low_complexity 1 42 0 591 245 54 0 chr5 2788657 2788804 -196841346 + MLT1D LTR MaLR 1 155 -350 976 211 18 22 chr5 2788871 2789094 -196841056 + MLT1D LTR MaLR 271 492 -13 1964 133 7 4 chr5 2789552 2789831 -196840319 + AluSq SINE Alu 1 280 -33 267 31 0 0 chr5 2789831 2789863 -196840287 + (CA)n Simple_repeat Simple_repeat 1 32 0 31 0 0 0 chr5 2790504 2790535 -196839615 + AT_rich Low_complexity Low_complexity 1 31 0 220 386 59 5 chr5 2791217 2791419 -196838731 + MIR SINE MIR 22 234 -28 235 225 33 42 chr5 2791470 2791590 -196838560 + (TATATG)n Simple_repeat Simple_repeat 6 124 0 237 268 28 0 chr5 2791806 2791877 -196838273 + CT-rich Low_complexity Low_complexity 3 75 0 2638 189 34 55 chr5 2791974 2792536 -196837614 - MER52A LTR ERV1 0 1755 1206 1286 227 88 65 chr5 2792509 2792998 -196837152 - MER52A LTR ERV1 -304 1349 531 * 307 264 172 0 chr5 2793022 2793109 -196837041 - MER52A LTR ERV1 -671 1084 983 518 219 233 7 chr5 2793126 2793272 -196836878 - MER52A LTR ERV1 -664 1091 913 3620 198 89 28 chr5 2793340 2794293 -196835857 - MER52A LTR ERV1 -658 1097 1 4138 149 17 8 chr5 2795829 2796534 -196833616 + MER50 LTR ERV1 1 711 -23 717 204 0 0 chr5 2797562 2797714 -196832436 + T-rich Low_complexity Low_complexity 1 152 0 2275 115 3 3 chr5 2797718 2798031 -196832119 - AluSq SINE Alu 0 313 1 22 0 0 0 chr5 2799294 2799316 -196830834 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 2800465 2800485 -196829665 + (CCCCCT)n Simple_repeat Simple_repeat 2 21 0 641 244 0 0 chr5 2801222 2801398 -196828752 + (CTGGGG)n Simple_repeat Simple_repeat 5 180 0 615 241 0 0 chr5 2801465 2801639 -196828511 + (CTGGGG)n Simple_repeat Simple_repeat 3 176 0 584 258 0 0 chr5 2801659 2801837 -196828313 + (CTGGGG)n Simple_repeat Simple_repeat 3 180 0 569 274 6 0 chr5 2801849 2802201 -196827949 + (CTGGGG)n Simple_repeat Simple_repeat 1 354 0 1979 150 7 0 chr5 2803462 2803768 -196826382 - AluSx SINE Alu -4 308 1 28 61 0 0 chr5 2804515 2804564 -196825586 + AT_rich Low_complexity Low_complexity 1 49 0 1297 214 64 113 chr5 2806177 2806691 -196823459 - MLT1E LTR MaLR -4 589 75 2225 125 0 0 chr5 2807311 2807623 -196822527 - AluSx SINE Alu 0 312 1 284 307 83 43 chr5 2807676 2807930 -196822220 + L1MC/D LINE L1 5476 5739 -382 182 132 53 0 chr5 2808423 2808461 -196821689 + CT-rich Low_complexity Low_complexity 1 40 0 266 176 20 0 chr5 2809783 2809834 -196820316 + LTR30 LTR ERV1 1 52 -670 1253 91 37 118 chr5 2809834 2810098 -196820052 + LTR12 LTR ERV1 57 258 -456 305 291 26 0 chr5 2810098 2810215 -196819935 + LTR30 LTR ERV1 524 643 -79 2526 84 0 0 chr5 2810215 2810537 -196819613 + LTR12 LTR ERV1 377 698 -16 1223 177 101 122 chr5 2810541 2810976 -196819174 + MSTA LTR MaLR 3 428 0 533 249 80 127 chr5 2811673 2812075 -196818075 + MLT1C LTR MaLR 1 464 -3 203 256 0 44 chr5 2814184 2814274 -196815876 + (TA)n Simple_repeat Simple_repeat 2 87 0 213 121 0 0 chr5 2815130 2815163 -196814987 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 495 0 0 0 chr5 2817262 2817317 -196812833 + (TA)n Simple_repeat Simple_repeat 1 55 0 2149 111 0 0 chr5 2817316 2817617 -196812533 - AluSg SINE Alu 0 301 1 28 48 0 0 chr5 2817811 2817853 -196812297 + AT_rich Low_complexity Low_complexity 1 42 0 1673 182 88 45 chr5 2818112 2818579 -196811571 + MLT2B1 LTR ERVL 1 487 -33 1791 214 86 34 chr5 2820608 2821132 -196809018 + L1MB7 LINE L1 5634 6184 0 291 365 58 12 chr5 2821475 2821716 -196808434 + MIR SINE MIR 8 259 -3 264 363 7 15 chr5 2822660 2822795 -196807355 + MIR SINE MIR 84 217 -45 2069 112 22 0 chr5 2824286 2824562 -196805588 + AluSg SINE Alu 13 294 -16 3368 224 35 33 chr5 2824779 2825093 -196805057 - L1MB8 LINE L1 -7 6171 5859 2308 101 7 0 chr5 2825093 2825399 -196804751 - AluSx SINE Alu -2 310 3 3368 224 35 33 chr5 2825399 2825962 -196804188 - L1MB8 LINE L1 -319 5859 5298 1930 192 78 2 chr5 2825962 2826358 -196803792 + MSTB LTR MaLR 1 426 0 3368 224 35 33 chr5 2826358 2826893 -196803257 - L1MB8 LINE L1 -880 5298 4747 2472 71 0 7 chr5 2826893 2827203 -196802947 - AluY SINE Alu -3 308 1 3368 224 35 33 chr5 2827203 2827320 -196802830 - L1MB8 LINE L1 -1431 4747 4632 1851 64 0 0 chr5 2827420 2827638 -196802512 + AluY SINE Alu 67 284 -27 217 86 0 0 chr5 2827638 2827673 -196802477 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 32 43 0 0 chr5 2827872 2827918 -196802232 + AT_rich Low_complexity Low_complexity 1 46 0 1524 269 69 18 chr5 2827957 2828563 -196801587 + L1ME2 LINE L1 5291 5927 -237 4666 147 14 13 chr5 2829209 2829985 -196800165 + Tigger1 DNA MER2_type 123 899 -1519 1043 128 24 0 chr5 2830085 2830249 -196799901 + AluSp SINE Alu 103 270 -43 276 77 0 0 chr5 2830252 2830291 -196799859 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 753 321 69 53 chr5 2830375 2830955 -196799195 - L1MC4a LINE L1 -1795 6013 5425 974 232 70 35 chr5 2830980 2831325 -196798825 + MER74B LTR ERVL 261 617 -5 926 236 16 64 chr5 2831328 2831777 -196798373 - L1MC4a LINE L1 -717 5449 5024 226 132 0 26 chr5 2832084 2832122 -196798028 + MLT1L LTR MaLR 579 615 0 192 283 22 0 chr5 2832260 2832306 -196797844 + L2 LINE L2 3267 3313 0 1006 156 0 118 chr5 2833364 2833601 -196796549 - AluJb SINE Alu -19 293 85 2297 248 64 90 chr5 2833994 2834156 -196795994 - L1MC4a LINE L1 -1127 5019 4854 409 159 16 0 chr5 2834156 2834249 -196795901 - AluJ/FRAM SINE Alu 0 314 221 2297 248 64 90 chr5 2834249 2835379 -196794771 - L1MC4a LINE L1 -1292 4854 3699 2303 244 74 53 chr5 2835399 2835646 -196794504 + L1M4 LINE L1 3797 4037 -2109 1942 119 0 14 chr5 2835646 2835981 -196794169 + AluSp SINE Alu 1 331 0 2303 244 74 53 chr5 2835981 2836831 -196793319 + L1M4 LINE L1 4037 4919 -1227 273 298 65 52 chr5 2839359 2839385 -196790765 + HAL1 LINE L1 2254 2278 -229 189 0 0 0 chr5 2839385 2839406 -196790744 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 273 298 65 52 chr5 2839406 2839627 -196790523 + HAL1 LINE L1 2278 2504 -3 231 184 53 13 chr5 2839700 2839776 -196790374 + CT-rich Low_complexity Low_complexity 1 79 0 1081 209 17 120 chr5 2841100 2841507 -196788643 - MLT1A1 LTR MaLR 0 365 1 502 233 194 30 chr5 2841538 2841770 -196788380 + MER5C DNA MER1_type 55 324 0 22 0 0 0 chr5 2842885 2842907 -196787243 + AT_rich Low_complexity Low_complexity 1 22 0 359 276 155 0 chr5 2845241 2845357 -196784793 - MIR SINE MIR -11 251 118 641 149 0 8 chr5 2848197 2848331 -196781819 + (TTCC)n Simple_repeat Simple_repeat 3 135 0 5621 155 21 25 chr5 2848427 2849536 -196780614 - L1MA7 LINE L1 0 6291 5188 5009 172 19 4 chr5 2849529 2850499 -196779651 + L1MA7 LINE L1 4202 5185 -961 * 232 218 35 81 chr5 2852393 2852480 -196777670 + L1ME4a LINE L1 5652 5734 -2074 1878 211 0 0 chr5 2853974 2854320 -196775830 - MER7A DNA MER2_type -1 345 2 2100 93 0 0 chr5 2854421 2854701 -196775449 + AluSx SINE Alu 33 312 0 297 0 0 0 chr5 2854986 2855019 -196775131 + (CA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr5 2855331 2855356 -196774794 + AT_rich Low_complexity Low_complexity 1 25 0 208 298 18 0 chr5 2858257 2858314 -196771836 + CT-rich Low_complexity Low_complexity 6 63 0 686 309 75 10 chr5 2858924 2859219 -196770931 - L3 LINE CR1 -622 955 642 858 190 0 118 chr5 2859754 2859991 -196770159 - AluJb SINE Alu -19 293 85 180 0 0 0 chr5 2860393 2860413 -196769737 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 288 0 0 0 chr5 2861664 2861696 -196768454 + (TG)n Simple_repeat Simple_repeat 2 33 0 1957 132 0 0 chr5 2863867 2864168 -196765982 - AluSg SINE Alu 0 301 1 24 0 0 0 chr5 2865836 2865860 -196764290 + AT_rich Low_complexity Low_complexity 1 24 0 470 355 52 66 chr5 2865987 2866314 -196763836 + L1MC4a LINE L1 4296 4626 -1520 2148 58 0 11 chr5 2866314 2866588 -196763562 - AluY SINE Alu -40 271 1 470 355 52 66 chr5 2866588 2867142 -196763008 + L1MC4a LINE L1 4626 5165 -981 243 250 8 48 chr5 2867278 2867402 -196762748 + L1MC4a LINE L1 5296 5397 -962 912 230 139 39 chr5 2867575 2868017 -196762133 + MLT1D LTR MaLR 1 378 -12 315 250 40 92 chr5 2868295 2868447 -196761703 + L1MC4a LINE L1 6121 6264 -1544 347 261 69 64 chr5 2868533 2868721 -196761429 + L1ME4a LINE L1 5933 6121 0 23 33 0 0 chr5 2869999 2870029 -196760121 + AT_rich Low_complexity Low_complexity 1 30 0 201 119 24 24 chr5 2871588 2871630 -196758520 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 290 80 60 0 chr5 2871632 2871682 -196758468 - L1MA4 LINE L1 -5 6295 6243 3102 38 0 0 chr5 2871925 2872293 -196757857 - L1PA4 LINE L1 -3 6152 5785 287 242 39 70 chr5 2873305 2873433 -196756717 - LTR16C LTR ERVL -2 489 366 1065 39 0 0 chr5 2876798 2876926 -196753224 + L1PA4 LINE L1 6028 6155 0 614 242 78 47 chr5 2880501 2880895 -196749255 - MLT1C LTR MaLR 0 458 5 1182 214 117 35 chr5 2882677 2882994 -196747156 + MER2 DNA MER2_type 1 343 -1 273 332 124 31 chr5 2883227 2883453 -196746697 - L3 LINE CR1 -1050 527 281 339 312 53 72 chr5 2883499 2883762 -196746388 - MIR SINE MIR -3 259 2 2457 85 0 0 chr5 2888422 2888717 -196741433 - AluSg SINE Alu -15 295 1 21 0 0 0 chr5 2888725 2888746 -196741404 + AT_rich Low_complexity Low_complexity 1 21 0 2219 84 19 22 chr5 2889346 2889657 -196740493 - AluSq SINE Alu -3 310 1 23 0 0 0 chr5 2889692 2889715 -196740435 + AT_rich Low_complexity Low_complexity 1 23 0 2204 133 0 0 chr5 2890871 2891171 -196738979 + AluSq SINE Alu 1 300 -13 595 257 60 6 chr5 2891353 2891536 -196738614 + MIR SINE MIR 67 259 -3 669 232 46 66 chr5 2892204 2892463 -196737687 - MLT1C LTR MaLR 0 467 214 1724 196 33 53 chr5 2892686 2893003 -196737147 + MER65A LTR ERV1 1 308 -137 6222 75 0 1 chr5 2893003 2893831 -196736319 + L1PA7 LINE L1 5346 6154 0 1724 196 33 53 chr5 2893831 2893967 -196736183 + MER65A LTR ERV1 308 445 0 1760 183 36 25 chr5 2895467 2895828 -196734322 - MLT1A1 LTR MaLR 0 365 1 2283 98 0 3 chr5 2895979 2896276 -196733874 + AluSg SINE Alu 1 296 -14 1606 155 66 7 chr5 2896424 2896695 -196733455 + AluJo SINE Alu 7 293 -19 1918 139 28 0 chr5 2899704 2899992 -196730158 - AluSx SINE Alu -16 296 1 228 196 0 20 chr5 2901758 2901809 -196728341 + (TTTA)n Simple_repeat Simple_repeat 1 50 0 2146 114 20 0 chr5 2902199 2902497 -196727653 + AluSx SINE Alu 1 304 -8 202 209 0 0 chr5 2902629 2902672 -196727478 + (CA)n Simple_repeat Simple_repeat 2 44 0 385 181 44 0 chr5 2905757 2905858 -196724292 + L1M4 LINE L1 1024 1275 -5271 24 53 0 0 chr5 2905931 2905969 -196724181 + AT_rich Low_complexity Low_complexity 1 38 0 399 277 80 40 chr5 2906053 2906277 -196723873 + L1ME LINE L1 5590 5822 -299 532 269 83 65 chr5 2906292 2907038 -196723112 + L1M4 LINE L1 1389 2360 -4465 4958 262 58 30 chr5 2907039 2908066 -196722084 + L1M4 LINE L1 2384 3381 -3263 1780 168 28 0 chr5 2908066 2908351 -196721799 - AluJb SINE Alu -18 294 2 4958 262 58 30 chr5 2908351 2909593 -196720557 + L1M4 LINE L1 3381 4686 -1958 2074 253 62 37 chr5 2909713 2910962 -196719188 + L1M4 LINE L1 4930 6222 -440 318 295 103 46 chr5 2911202 2911504 -196718646 + L1M4 LINE L1 2411 2729 -3653 453 194 136 99 chr5 2911688 2911930 -196718220 - MLT1F1 LTR MaLR -209 358 108 496 141 202 10 chr5 2912094 2912193 -196717957 - Tigger1 DNA MER2_type 0 2418 2301 900 181 66 6 chr5 2913389 2913571 -196716579 + MER58 DNA MER1_type 1 193 -148 2184 102 3 10 chr5 2913598 2913893 -196716257 + AluY SINE Alu 1 293 -18 7384 127 23 6 chr5 2913893 2915056 -196715094 - Tigger1 DNA MER2_type -109 2309 1127 1083 223 48 53 chr5 2915156 2915533 -196714617 + MLT1C LTR MaLR 77 451 -16 548 276 65 5 chr5 2915834 2916033 -196714117 - MLT1J LTR MaLR -246 265 55 1519 134 0 0 chr5 2916521 2916737 -196713413 - AluSg/x SINE Alu -1 309 94 236 324 76 34 chr5 2916955 2917217 -196712933 - L1ME LINE L1 -302 5819 5547 1245 204 106 23 chr5 2918311 2918659 -196711491 + MLT1B LTR MaLR 6 382 -8 548 232 132 32 chr5 2919196 2919416 -196710734 + MLT1C LTR MaLR 6 247 -220 1057 202 51 14 chr5 2920543 2920925 -196709225 - MLT1B LTR MaLR -38 352 2 2256 105 0 3 chr5 2920994 2921345 -196708805 + AluSg SINE Alu 1 350 0 1024 174 9 19 chr5 2922397 2922609 -196707541 + L1MA4 LINE L1 6091 6300 0 453 292 97 36 chr5 2922609 2923148 -196707002 + L1MC/D LINE L1 951 1504 -4625 29 47 0 0 chr5 2923374 2923417 -196706733 + AT_rich Low_complexity Low_complexity 1 43 0 297 323 143 37 chr5 2923874 2924179 -196705971 + L1MC/D LINE L1 3457 3818 -2311 2248 99 0 0 chr5 2924179 2924495 -196705655 - AluSx SINE Alu 0 318 3 297 323 143 37 chr5 2924495 2924594 -196705556 + L1MC/D LINE L1 3818 3905 -2224 * 686 252 38 24 chr5 2924581 2924791 -196705359 + L1MD3 LINE L1 7783 7995 0 455 291 166 32 chr5 2924788 2925228 -196704922 + HAL1 LINE L1 1553 2051 -456 * 21 0 0 0 chr5 2925823 2925844 -196704306 + AT_rich Low_complexity Low_complexity 1 21 0 425 308 74 8 chr5 2925953 2926213 -196703937 + L1MC/D LINE L1 5197 5471 -743 717 235 54 0 chr5 2926315 2926519 -196703631 - L1ME3 LINE L1 0 6162 5948 499 197 0 26 chr5 2926641 2926758 -196703392 + L1MB8 LINE L1 6064 6177 -1 1748 212 54 32 chr5 2926797 2927929 -196702221 - L1ME3 LINE L1 -608 5751 4618 231 342 13 0 chr5 2928064 2928143 -196702007 - L2 LINE L2 0 3272 3193 214 349 0 0 chr5 2928502 2928568 -196701582 - L2 LINE L2 0 3313 3248 1309 220 39 62 chr5 2928937 2929373 -196700777 - MSTB LTR MaLR 0 426 1 23 0 0 0 chr5 2931107 2931130 -196699020 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 2933423 2933452 -196696698 + GC_rich Low_complexity Low_complexity 1 29 0 297 237 8 42 chr5 2936488 2936667 -196693483 + G-rich Low_complexity Low_complexity 1 172 0 248 275 0 0 chr5 2936738 2936807 -196693343 + C-rich Low_complexity Low_complexity 2 70 0 200 111 28 0 chr5 2937007 2937043 -196693107 + (CCG)n Simple_repeat Simple_repeat 2 38 0 39 100 0 0 chr5 2937070 2937200 -196692950 + GC_rich Low_complexity Low_complexity 1 130 0 192 40 0 0 chr5 2937410 2937435 -196692715 + (CCG)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr5 2937530 2937551 -196692599 + GC_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 2937659 2937690 -196692460 + GC_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 2939798 2939826 -196690324 + GC_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 2939860 2939881 -196690269 + GC_rich Low_complexity Low_complexity 1 21 0 28 61 0 0 chr5 2939943 2939992 -196690158 + GC_rich Low_complexity Low_complexity 1 49 0 27 0 0 0 chr5 2940275 2940302 -196689848 + GC_rich Low_complexity Low_complexity 1 27 0 359 164 0 16 chr5 2941287 2941348 -196688802 + L1MC4 LINE L1 6644 6703 -1339 208 162 27 0 chr5 2941349 2941386 -196688764 + (TATATG)n Simple_repeat Simple_repeat 6 43 0 198 0 0 0 chr5 2941850 2941872 -196688278 + (A)n Simple_repeat Simple_repeat 1 22 0 450 0 0 0 chr5 2944498 2944548 -196685602 + (CA)n Simple_repeat Simple_repeat 2 51 0 21 57 0 0 chr5 2945068 2945103 -196685047 + GC_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr5 2945232 2945269 -196684881 + GC_rich Low_complexity Low_complexity 1 37 0 26 50 0 0 chr5 2945992 2946032 -196684118 + AT_rich Low_complexity Low_complexity 1 40 0 1024 225 61 58 chr5 2951606 2952259 -196677891 - Zaphod DNA AcHobo -20 4011 736 921 140 136 9 chr5 2952968 2953189 -196676961 - L1MC2 LINE L1 0 6344 6096 259 224 0 15 chr5 2953382 2953449 -196676701 - MER53 DNA DNA -120 69 4 1628 180 27 24 chr5 2957510 2957804 -196672346 - AluJo SINE Alu -13 299 5 219 148 16 33 chr5 2958838 2958899 -196671251 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 336 48 0 0 chr5 2959171 2959213 -196670937 + (CA)n Simple_repeat Simple_repeat 2 43 0 211 358 100 0 chr5 2959815 2959935 -196670215 + L2 LINE L2 3133 3264 -8 209 289 107 71 chr5 2960927 2961124 -196669026 - MIR SINE MIR -45 217 14 28 0 0 0 chr5 2961826 2961854 -196668296 + AT_rich Low_complexity Low_complexity 1 28 0 1953 131 0 38 chr5 2964845 2965135 -196665015 + AluSx SINE Alu 1 279 -33 210 71 0 0 chr5 2965137 2965165 -196664985 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr5 2966010 2966033 -196664117 + AT_rich Low_complexity Low_complexity 1 23 0 1471 157 80 44 chr5 2970557 2970711 -196659439 - THE1C LTR MaLR -12 416 269 288 0 0 0 chr5 2970711 2970743 -196659407 + (GA)n Simple_repeat Simple_repeat 1 32 0 1471 157 80 44 chr5 2970743 2970916 -196659234 - THE1C LTR MaLR -159 269 9 315 83 0 21 chr5 2970916 2970964 -196659186 - THE1B LTR MaLR -317 47 1 500 266 137 78 chr5 2971033 2971454 -196658696 - MLT1D LTR MaLR -2 465 27 238 286 12 12 chr5 2971590 2971674 -196658476 + CT-rich Low_complexity Low_complexity 4 87 0 801 236 34 0 chr5 2972173 2972351 -196657799 - MLT1G LTR MaLR -13 577 394 1572 216 18 9 chr5 2972351 2972685 -196657465 + MLT2C1 LTR ERVL 1 337 -60 453 153 201 49 chr5 2972685 2972829 -196657321 - MER4A LTR ERV1 0 465 300 1916 125 38 60 chr5 2972869 2973254 -196656896 - MER4A LTR ERV1 -240 357 2 271 242 15 0 chr5 2973506 2973572 -196656578 - MLT1G LTR MaLR -57 533 467 * 371 337 28 17 chr5 2973568 2973749 -196656401 - MLT1G LTR MaLR -407 183 1 26 0 0 0 chr5 2974257 2974283 -196655867 + AT_rich Low_complexity Low_complexity 1 26 0 627 308 97 21 chr5 2975121 2975628 -196654522 - MLT1G LTR MaLR 0 590 18 216 0 0 0 chr5 2975726 2975750 -196654400 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 3037 155 28 6 chr5 2976083 2976586 -196653564 - MER1A DNA MER1_type 0 529 16 189 147 0 0 chr5 2976711 2976745 -196653405 + (TCCC)n Simple_repeat Simple_repeat 2 35 0 372 399 79 6 chr5 2976748 2977076 -196653074 + L2 LINE L2 2916 3267 -5 1843 179 0 3 chr5 2977356 2977669 -196652481 + AluSx SINE Alu 1 312 0 395 298 47 25 chr5 2978267 2978433 -196651717 - MIR SINE MIR -46 162 34 223 49 49 0 chr5 3029967 3030008 -196600142 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 471 219 0 0 chr5 3030755 3030933 -196599217 + (TG)n Simple_repeat Simple_repeat 2 179 0 404 236 6 0 chr5 3030979 3031157 -196598993 + (TG)n Simple_repeat Simple_repeat 1 179 0 362 214 7 0 chr5 3031192 3031337 -196598813 + (TG)n Simple_repeat Simple_repeat 2 147 0 324 302 82 60 chr5 3032832 3033064 -196597086 - L1M4 LINE L1 -813 5333 5097 988 190 6 0 chr5 3033143 3033317 -196596833 - FRAM SINE Alu -7 169 1 22 0 0 0 chr5 3034945 3034967 -196595183 + AT_rich Low_complexity Low_complexity 1 22 0 2267 110 3 13 chr5 3035091 3035400 -196594750 + AluSx SINE Alu 1 306 -6 212 197 0 33 chr5 3036637 3036698 -196593452 + GA-rich Low_complexity Low_complexity 3 61 0 1920 163 10 7 chr5 3037184 3037490 -196592660 + AluJb SINE Alu 6 312 0 2331 87 3 13 chr5 3038753 3039065 -196591085 - AluY SINE Alu -2 309 1 2113 131 0 0 chr5 3040326 3040652 -196589498 + AluSx SINE Alu 1 326 0 181 286 0 54 chr5 3043682 3043738 -196586412 + MIR SINE MIR 95 145 -63 204 200 0 0 chr5 3044309 3044344 -196585806 - L3 LINE CR1 -994 583 549 27 0 0 0 chr5 3045256 3045283 -196584867 + AT_rich Low_complexity Low_complexity 1 27 0 285 309 51 86 chr5 3045855 3046250 -196583900 + MLT1I LTR MaLR 20 400 -9 182 150 25 0 chr5 3048379 3048419 -196581731 + (TA)n Simple_repeat Simple_repeat 1 41 0 2262 134 10 21 chr5 3048430 3048819 -196581331 + L1PA16 LINE L1 5524 5908 -258 183 80 0 0 chr5 3048819 3048844 -196581306 + (TATATG)n Simple_repeat Simple_repeat 3 27 0 960 36 61 0 chr5 3049497 3049662 -196580488 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 336 393 23 40 chr5 3050098 3050216 -196579934 + L1MC4a LINE L1 5548 5666 -2142 6921 75 6 0 chr5 3050216 3051310 -196578840 + L1PA8 LINE L1 5090 6193 0 336 393 23 40 chr5 3051310 3051544 -196578606 + L1MC4a LINE L1 5666 5895 -1913 304 318 90 42 chr5 3052712 3052901 -196577249 + L1MDa LINE L1 2441 2638 -3902 271 308 91 23 chr5 3053259 3053480 -196576670 - MER106A DNA MER1_type 0 236 1 3565 190 11 22 chr5 3053537 3054169 -196575981 - MER72 LTR ERV1 0 722 98 2216 114 3 19 chr5 3054169 3054486 -196575664 - AluSx SINE Alu 0 312 1 3565 190 11 22 chr5 3054486 3054583 -196575567 - MER72 LTR ERV1 -624 98 1 182 341 11 0 chr5 3056608 3056696 -196573454 - L2 LINE L2 -836 2478 2390 291 114 0 0 chr5 3060652 3060696 -196569454 + (CA)n Simple_repeat Simple_repeat 1 44 0 244 346 57 0 chr5 3063756 3063885 -196566265 - MIR SINE MIR -77 131 16 2193 114 3 7 chr5 3063944 3064250 -196565900 + AluSc SINE Alu 5 309 0 437 279 33 0 chr5 3065710 3065832 -196564318 - MER63 DNA MER1_type -53 783 32 2286 110 0 3 chr5 3070301 3070600 -196559550 - AluY SINE Alu -13 298 1 2059 141 3 0 chr5 3070810 3071108 -196559042 + AluSx SINE Alu 1 299 -13 330 274 109 95 chr5 3071412 3071824 -196558326 - L2 LINE L2 -31 3241 2824 280 302 113 22 chr5 3074823 3075098 -196555052 - LTR16A1 LTR ERVL -2 455 156 243 250 0 0 chr5 3076827 3076887 -196553263 + (CA)n Simple_repeat Simple_repeat 2 61 0 291 247 28 22 chr5 3077129 3077307 -196552843 + (TA)n Simple_repeat Simple_repeat 2 180 0 313 276 57 9 chr5 3077686 3077791 -196552359 + L2 LINE L2 3203 3312 -1 302 236 36 86 chr5 3080726 3080866 -196549284 + MER115 DNA AcHobo 505 637 -56 230 288 14 0 chr5 3080896 3080969 -196549181 - MER63 DNA MER1_type -8 1053 980 2120 125 7 0 chr5 3081929 3082226 -196547924 - AluSx SINE Alu -13 299 1 2349 91 3 9 chr5 3082416 3082745 -196547405 + L1PA8A LINE L1 5798 6124 -7 364 289 112 27 chr5 3084282 3084469 -196545681 - MIR SINE MIR 0 262 60 309 0 0 0 chr5 3085015 3085051 -196545099 + L1PA6 LINE L1 6111 6146 -8 881 209 81 0 chr5 3085067 3085278 -196544872 - MLT2C2 LTR ERVL -236 228 1 642 252 176 56 chr5 3086104 3086497 -196543653 + MLT1F LTR MaLR 85 524 -18 233 320 145 24 chr5 3086632 3086969 -196543181 + L2 LINE L2 2576 2953 -361 2194 92 13 10 chr5 3087318 3087623 -196542527 - AluSc SINE Alu -3 306 1 560 273 136 10 chr5 3087832 3088030 -196542120 + MER58A DNA MER1_type 1 223 -1 188 229 62 0 chr5 3089744 3089792 -196540358 + L2 LINE L2 3222 3272 0 302 276 133 0 chr5 3091225 3091330 -196538820 + L1M4 LINE L1 3039 3157 -2989 * 414 276 115 0 chr5 3091324 3091480 -196538670 + L1M4 LINE L1 3081 3254 -2892 538 266 101 38 chr5 3091580 3091847 -196538303 + L1M4 LINE L1 3579 3862 -2284 229 300 12 0 chr5 3092539 3092619 -196537531 + (TA)n Simple_repeat Simple_repeat 2 82 0 998 254 71 97 chr5 3094793 3096058 -196534092 - L1ME LINE L1 -4602 1659 371 427 341 101 23 chr5 3096252 3096818 -196533332 - L1 LINE L1 -2285 3861 3252 2828 16 0 0 chr5 3096978 3097282 -196532868 - AluYb8 SINE Alu -14 304 1 21 0 0 0 chr5 3097453 3097474 -196532676 + AT_rich Low_complexity Low_complexity 1 21 0 323 325 122 27 chr5 3097580 3098128 -196532022 - L1 LINE L1 -3381 2765 2166 384 338 55 55 chr5 3098684 3099027 -196531123 - HAL1b LINE L1 -710 638 296 1841 113 7 25 chr5 3099158 3099433 -196530717 - AluSq SINE Alu -39 274 5 284 284 61 34 chr5 3100136 3100284 -196529866 + L1ME LINE L1 5533 5684 -437 35 0 0 0 chr5 3100325 3100360 -196529790 + AT_rich Low_complexity Low_complexity 1 35 0 329 272 22 0 chr5 3100587 3100679 -196529471 - L1MC4 LINE L1 -1338 6704 6611 440 205 6 0 chr5 3101355 3101511 -196528639 + (TG)n Simple_repeat Simple_repeat 1 157 0 486 213 0 0 chr5 3101524 3101684 -196528466 + (TG)n Simple_repeat Simple_repeat 2 161 0 294 222 81 0 chr5 3101687 3101786 -196528364 + (TCTG)n Simple_repeat Simple_repeat 4 110 0 566 188 0 6 chr5 3101791 3101972 -196528178 + (TG)n Simple_repeat Simple_repeat 1 180 0 342 249 0 0 chr5 3101996 3102169 -196527981 + (TG)n Simple_repeat Simple_repeat 2 174 0 385 152 22 43 chr5 3102885 3103069 -196527081 + (CA)n Simple_repeat Simple_repeat 1 180 0 210 306 45 18 chr5 3105537 3105648 -196524502 + MER5A DNA MER1_type 1 114 -75 2369 95 0 0 chr5 3105714 3106020 -196524130 - AluSx SINE Alu -6 306 1 405 39 0 0 chr5 3106709 3106760 -196523390 + (TC)n Simple_repeat Simple_repeat 2 52 0 926 301 36 40 chr5 3108387 3108836 -196521314 - MLT1E3 LTR MaLR -12 612 166 717 207 4 0 chr5 3110502 3110772 -196519378 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 1622 272 42 27 chr5 3112725 3113272 -196516878 + MLT1H1 LTR MaLR 1 555 0 287 248 91 16 chr5 3113463 3113584 -196516566 + MIR SINE MIR 85 214 -48 1385 142 0 0 chr5 3113630 3113827 -196516323 - AluSc SINE Alu -16 293 97 5603 87 1 20 chr5 3114634 3115443 -196514707 + L1PA8A LINE L1 5331 6124 -7 504 48 0 0 chr5 3116626 3116689 -196513461 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 1170 117 0 0 chr5 3116689 3116868 -196513282 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 763 133 7 14 chr5 3116873 3117016 -196513134 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 378 42 0 0 chr5 3117293 3117341 -196512809 + (CA)n Simple_repeat Simple_repeat 2 49 0 396 167 0 0 chr5 3118940 3119012 -196511138 + (TG)n Simple_repeat Simple_repeat 1 72 0 1472 201 30 0 chr5 3120859 3121163 -196508987 - MLT1B LTR MaLR -7 383 71 482 151 28 38 chr5 3121187 3121293 -196508857 - MLT1B LTR MaLR -272 118 14 342 204 39 107 chr5 3122861 3122964 -196507186 - L1ME1 LINE L1 0 6444 6349 1831 232 71 55 chr5 3123046 3124579 -196505571 - L1ME1 LINE L1 -77 6369 4589 1886 283 46 10 chr5 3124708 3125387 -196504763 - L1ME1 LINE L1 -2163 4263 3561 238 184 20 0 chr5 3125386 3125435 -196504715 + L1MCc LINE L1 823 872 -5551 * 291 312 102 24 chr5 3126372 3126455 -196503695 - MIR SINE MIR -40 222 147 192 77 0 0 chr5 3126455 3126481 -196503669 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 291 312 102 24 chr5 3126481 3126602 -196503548 - MIR SINE MIR -115 147 2 457 323 54 40 chr5 3128551 3128848 -196501302 - L1ME1 LINE L1 -3518 2908 2608 1896 152 3 0 chr5 3129320 3129617 -196500533 - AluJb SINE Alu -14 298 1 491 259 127 33 chr5 3129673 3130008 -196500142 - L1ME1 LINE L1 -3842 2584 2214 380 321 123 51 chr5 3130210 3130751 -196499399 - L1ME1 LINE L1 -753 2034 1451 1910 137 3 0 chr5 3130978 3131270 -196498880 + AluSq SINE Alu 1 293 -20 3574 65 9 2 chr5 3131607 3132068 -196498082 - L1PA8 LINE L1 -1 6171 5708 322 296 80 24 chr5 3132654 3132779 -196497371 - L1ME1 LINE L1 -5952 464 333 199 254 30 45 chr5 3134001 3134068 -196496082 + L2 LINE L2 3247 3312 -1 308 237 50 101 chr5 3134890 3135029 -196495121 + LTR33A LTR ERVL 61 192 -331 2242 32 43 11 chr5 3136395 3136705 -196493445 - AluY SINE Alu 0 311 3 249 108 0 0 chr5 3138250 3138287 -196491863 + (A)n Simple_repeat Simple_repeat 1 37 0 232 211 62 62 chr5 3139513 3139641 -196490509 - L1ME4a LINE L1 0 6121 5994 427 389 70 18 chr5 3142561 3142960 -196487190 + L1ME2 LINE L1 376 795 -5926 438 251 61 110 chr5 3143464 3144216 -196485934 + L1ME2 LINE L1 1191 1838 -4704 287 274 14 0 chr5 3144421 3144494 -196485656 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 448 286 59 11 chr5 3144726 3145058 -196485092 + L1ME2 LINE L1 2399 2749 -3791 774 172 55 43 chr5 3145097 3145260 -196484890 + FRAM SINE Alu 1 156 -20 388 235 10 10 chr5 3145260 3145358 -196484792 + L1ME2 LINE L1 5564 5661 -879 199 200 13 13 chr5 3145361 3145436 -196484714 + (TA)n Simple_repeat Simple_repeat 1 75 0 2219 283 52 27 chr5 3145478 3146340 -196483810 + L1ME2 LINE L1 5660 6549 -9 364 223 157 16 chr5 3147910 3148031 -196482119 - L2 LINE L2 0 3313 3176 362 270 92 58 chr5 3148167 3148664 -196481486 - MLT1G1 LTR MaLR -90 452 2 412 245 90 58 chr5 3148735 3148890 -196481260 - MIR SINE MIR -17 245 86 185 280 118 11 chr5 3150798 3150891 -196479259 - L2 LINE L2 -145 3127 3025 1659 125 131 41 chr5 3151590 3151934 -196478216 + THE1C LTR MaLR 1 375 0 1523 195 13 10 chr5 3152733 3153041 -196477109 - AluJb SINE Alu -3 309 1 473 289 84 4 chr5 3154070 3154319 -196475831 - Charlie5 DNA MER1_type 0 2620 2352 469 246 27 77 chr5 3154318 3154501 -196475649 - Charlie5 DNA MER1_type -2413 199 26 * 194 180 0 60 chr5 3155796 3155896 -196474254 + (CA)n Simple_repeat Simple_repeat 1 94 0 433 257 6 39 chr5 3155961 3156140 -196474010 + (CA)n Simple_repeat Simple_repeat 1 173 0 336 272 16 38 chr5 3156313 3156497 -196473653 + (CA)n Simple_repeat Simple_repeat 1 180 0 315 256 0 0 chr5 3157396 3157486 -196472664 + (TGGA)n Simple_repeat Simple_repeat 4 93 0 932 183 7 0 chr5 3157502 3157798 -196472352 + (TGGA)n Simple_repeat Simple_repeat 1 298 0 180 176 0 0 chr5 3157816 3157850 -196472300 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 809 185 6 0 chr5 3157870 3158043 -196472107 + (TAGA)n Simple_repeat Simple_repeat 3 176 0 351 0 0 0 chr5 3158361 3158400 -196471750 + (TG)n Simple_repeat Simple_repeat 2 40 0 673 187 49 76 chr5 3161299 3161524 -196468626 + MER20 DNA MER1_type 1 219 0 302 123 37 25 chr5 3161945 3162026 -196468124 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 1654 225 77 64 chr5 3163077 3163543 -196466607 + MLT1H1 LTR MaLR 16 491 -64 1930 135 14 0 chr5 3163543 3163839 -196466311 - AluSx SINE Alu -12 300 1 1654 225 77 64 chr5 3163839 3163905 -196466245 + MLT1H1 LTR MaLR 491 555 0 379 318 19 7 chr5 3164049 3164203 -196465947 + MER112 DNA MER1_type 97 252 -8 407 213 7 0 chr5 3165462 3165603 -196464547 + (TG)n Simple_repeat Simple_repeat 1 142 0 759 176 0 2 chr5 3165620 3166224 -196463926 + (TG)n Simple_repeat Simple_repeat 1 602 0 701 175 4 0 chr5 3166237 3166495 -196463655 + (TG)n Simple_repeat Simple_repeat 1 259 0 188 365 73 10 chr5 3169112 3169208 -196460942 - MIR SINE MIR -159 103 2 5555 168 21 10 chr5 3169435 3170468 -196459682 - L1MA6 LINE L1 0 6300 5256 440 266 35 53 chr5 3170468 3170637 -196459513 + MER5B DNA MER1_type 8 173 -5 2062 193 29 60 chr5 3170713 3170910 -196459240 + MER82 DNA MER2_type 1 203 -450 2110 160 30 0 chr5 3170910 3171248 -196458902 + MER7A DNA MER2_type 1 346 0 2062 193 29 60 chr5 3171248 3171531 -196458619 + MER82 DNA MER2_type 203 466 -187 698 211 18 4 chr5 3171569 3172037 -196458113 + (CA)n Simple_repeat Simple_repeat 1 474 0 587 159 34 28 chr5 3172020 3172196 -196457954 + (CATA)n Simple_repeat Simple_repeat 2 178 0 * 688 274 93 13 chr5 3172892 3173202 -196456948 + MER93b LTR ERV1 39 373 0 1596 195 139 0 chr5 3175099 3175473 -196454677 - MSTA LTR MaLR -2 426 1 2134 80 35 0 chr5 3175864 3176151 -196453999 + AluSp SINE Alu 1 297 -16 2058 119 13 0 chr5 3177269 3177572 -196452578 + AluSx SINE Alu 1 307 -5 228 75 0 50 chr5 3178567 3178607 -196451543 - MLT1J1 LTR MaLR -125 321 284 573 239 16 38 chr5 3179458 3179642 -196450508 + L1MA10 LINE L1 6108 6287 -47 1405 229 38 15 chr5 3182868 3183208 -196446942 + MER7A DNA MER2_type 1 346 0 362 288 48 78 chr5 3183277 3183496 -196446654 - MIR SINE MIR -34 228 19 423 0 0 0 chr5 3183708 3183755 -196446395 + (TG)n Simple_repeat Simple_repeat 2 48 0 32 43 0 0 chr5 3184060 3184106 -196446044 + AT_rich Low_complexity Low_complexity 1 46 0 316 57 0 38 chr5 3184887 3184940 -196445210 + (TCCCG)n Simple_repeat Simple_repeat 3 53 0 591 127 25 0 chr5 3184963 3185081 -196445069 + CT-rich Low_complexity Low_complexity 3 123 0 1530 100 8 34 chr5 3185089 3185328 -196444822 - AluSg/x SINE Alu -6 306 74 581 185 0 22 chr5 3185689 3185873 -196444277 + CT-rich Low_complexity Low_complexity 1 180 0 228 294 0 0 chr5 3186537 3186656 -196443494 + (CA)n Simple_repeat Simple_repeat 1 119 0 190 299 28 47 chr5 3186703 3186810 -196443340 + L2 LINE L2 1831 1935 -1379 357 247 0 0 chr5 3187790 3187871 -196442279 - MLT1D LTR MaLR 0 505 425 196 222 97 28 chr5 3187997 3188069 -196442081 - MIR SINE MIR -97 165 89 852 203 0 0 chr5 3188124 3188465 -196441685 + (TGGA)n Simple_repeat Simple_repeat 1 341 0 765 194 0 0 chr5 3188485 3188655 -196441495 + (TGGA)n Simple_repeat Simple_repeat 1 170 0 902 181 0 3 chr5 3188673 3189038 -196441112 + (TGGA)n Simple_repeat Simple_repeat 1 363 0 1146 188 0 0 chr5 3189058 3189405 -196440745 + (TGGA)n Simple_repeat Simple_repeat 1 347 0 214 280 40 0 chr5 3190108 3190158 -196439992 + MER5B DNA MER1_type 125 176 -2 2372 81 0 0 chr5 3190250 3190560 -196439590 - AluY SINE Alu -1 310 1 324 284 193 25 chr5 3192252 3192495 -196437655 - L2 LINE L2 -1242 2072 1789 228 309 118 58 chr5 3192921 3193267 -196436883 - L2 LINE L2 -1758 1556 1190 221 273 191 22 chr5 3193343 3193574 -196436576 - L2 LINE L2 -2311 1003 734 1990 122 0 0 chr5 3195443 3195730 -196434420 + AluSx SINE Alu 11 297 -15 1771 147 0 10 chr5 3196097 3196390 -196433760 + AluJb SINE Alu 1 290 -22 2492 110 31 8 chr5 3197878 3198234 -196431916 - THE1B LTR MaLR 0 364 1 1071 224 113 36 chr5 3198307 3198642 -196431508 - MLT1A1 LTR MaLR -2 363 3 403 253 121 91 chr5 3198927 3199267 -196430883 - MLT1I LTR MaLR 0 409 60 226 271 17 0 chr5 3199374 3199433 -196430717 - MIR SINE MIR -171 91 32 1713 191 34 8 chr5 3201782 3202138 -196428012 + MLT1A1 LTR MaLR 1 365 0 303 298 116 56 chr5 3202327 3202525 -196427625 + L1M4 LINE L1 3770 3979 -2167 266 288 34 20 chr5 3202657 3202803 -196427347 + L1M4 LINE L1 4128 4275 -1871 27 29 0 0 chr5 3203364 3203398 -196426752 + AT_rich Low_complexity Low_complexity 1 34 0 1113 163 128 0 chr5 3203407 3203665 -196426485 - MER33 DNA MER1_type -1 323 33 475 327 24 6 chr5 3204104 3204272 -196425878 + MIR SINE MIR 46 216 -46 250 250 0 0 chr5 3205486 3205542 -196424608 + (CA)n Simple_repeat Simple_repeat 2 57 0 21 82 0 0 chr5 3206109 3206158 -196423992 + AT_rich Low_complexity Low_complexity 1 49 0 1186 239 34 34 chr5 3206308 3206664 -196423486 - MLT1A2 LTR MaLR 0 374 19 23 0 0 0 chr5 3208290 3208313 -196421837 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 3208721 3208742 -196421408 + (TAA)n Simple_repeat Simple_repeat 2 22 0 407 306 19 19 chr5 3208744 3208901 -196421249 - MIR SINE MIR -11 251 95 297 276 14 55 chr5 3209036 3209181 -196420969 + (CATG)n Simple_repeat Simple_repeat 2 140 0 214 406 6 6 chr5 3209243 3209418 -196420732 + (CA)n Simple_repeat Simple_repeat 1 175 0 22 0 0 0 chr5 3210641 3210663 -196419487 + AT_rich Low_complexity Low_complexity 1 22 0 950 180 6 0 chr5 3210733 3210925 -196419225 - AluSx SINE Alu 0 313 121 568 176 0 0 chr5 3210961 3211052 -196419098 - AluSx SINE Alu -180 133 43 261 358 84 28 chr5 3213865 3214044 -196416106 + L3 LINE CR1 1246 1434 -143 897 211 40 44 chr5 3214366 3214593 -196415557 - ORSL DNA AcHobo -14 261 36 331 307 35 9 chr5 3215847 3215961 -196414189 - L1M4 LINE L1 -846 5798 5682 533 267 87 46 chr5 3215997 3216083 -196414067 - L1MEc LINE L1 -1784 4860 4779 1828 163 0 0 chr5 3216083 3216383 -196413767 - AluSx SINE Alu -12 300 1 533 267 87 46 chr5 3216383 3216491 -196413659 - L1MEc LINE L1 -1865 4779 4658 319 295 27 54 chr5 3216523 3216859 -196413291 - L1MEc LINE L1 -2063 4581 4255 619 244 93 136 chr5 3216865 3217126 -196413024 - L1MEc LINE L1 -2610 4034 3764 222 37 0 0 chr5 3217126 3217153 -196412997 + (TC)n Simple_repeat Simple_repeat 2 28 0 619 244 93 136 chr5 3217153 3217513 -196412637 - L1MEc LINE L1 -2880 3764 3472 4313 56 9 0 chr5 3217513 3218051 -196412099 + L1PA5 LINE L1 5612 6154 0 619 244 93 136 chr5 3218051 3218476 -196411674 - L1MEc LINE L1 -3172 3472 3031 1834 138 17 3 chr5 3218476 3218765 -196411385 + AluSq SINE Alu 1 293 -20 857 232 103 21 chr5 3218871 3219250 -196410900 - L1MEc LINE L1 -3940 2706 2297 1226 198 154 31 chr5 3219366 3219684 -196410466 - MLT1A1 LTR MaLR 0 365 9 357 144 36 18 chr5 3219684 3219795 -196410355 + (TA)n Simple_repeat Simple_repeat 2 114 0 5172 249 46 36 chr5 3219795 3221845 -196408305 - L1M4 LINE L1 -4565 2081 5 242 264 100 27 chr5 3221863 3221973 -196408177 - L1MEc LINE L1 -4766 2059 1942 284 298 53 11 chr5 3222119 3222213 -196407937 + MER20B DNA MER1_type 62 159 -624 2105 111 0 0 chr5 3224354 3224652 -196405498 + AluSg SINE Alu 1 298 -12 295 245 11 21 chr5 3226116 3226210 -196403940 + CT-rich Low_complexity Low_complexity 2 94 0 1085 239 77 11 chr5 3227479 3227830 -196402320 + MLT1A2 LTR MaLR 1 374 0 623 254 172 67 chr5 3227956 3228404 -196401746 - L1ME4a LINE L1 -6 6115 5621 2258 92 7 0 chr5 3230483 3230789 -196399361 - AluY SINE Alu -3 308 1 407 348 13 25 chr5 3230921 3231079 -196399071 - MIR SINE MIR -52 210 55 677 251 67 5 chr5 3231124 3231319 -196398831 - MER20 DNA MER1_type -5 214 8 187 255 0 43 chr5 3231606 3231653 -196398497 + L3 LINE CR1 642 686 -891 2506 96 19 25 chr5 3232072 3232438 -196397712 + THE1B LTR MaLR 1 364 0 253 260 53 60 chr5 3232742 3232892 -196397258 - MIR SINE MIR -54 208 60 27 0 0 0 chr5 3234537 3234564 -196395586 + AT_rich Low_complexity Low_complexity 1 27 0 1260 206 29 29 chr5 3238784 3239129 -196391021 - MLT1C LTR MaLR -42 425 81 243 269 0 0 chr5 3239303 3239433 -196390717 + (CA)n Simple_repeat Simple_repeat 1 130 0 282 292 0 0 chr5 3239462 3239640 -196390510 + (CA)n Simple_repeat Simple_repeat 1 178 0 435 38 0 0 chr5 3240891 3240944 -196389206 + (TG)n Simple_repeat Simple_repeat 2 54 0 193 311 58 19 chr5 3241588 3241691 -196388459 + L2 LINE L2 3155 3261 -11 237 33 0 0 chr5 3243015 3243045 -196387105 + (CA)n Simple_repeat Simple_repeat 1 30 0 279 200 0 0 chr5 3244296 3244346 -196385804 - tRNA-Gly-GGA tRNA tRNA -25 50 1 720 176 0 2 chr5 3244763 3245369 -196384781 + (TG)n Simple_repeat Simple_repeat 1 604 0 725 150 0 6 chr5 3245388 3245555 -196384595 + (TG)n Simple_repeat Simple_repeat 2 167 0 370 267 19 0 chr5 3246361 3246466 -196383684 - L2 LINE L2 -8 3305 3199 30 27 0 0 chr5 3246549 3246586 -196383564 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 3246825 3246853 -196383297 + AT_rich Low_complexity Low_complexity 1 28 0 284 213 16 16 chr5 3247102 3247163 -196382987 + MER81 DNA DNA 54 114 0 229 327 89 12 chr5 3247552 3247800 -196382350 + L1ME3A LINE L1 4949 5215 -931 424 321 198 33 chr5 3247964 3248328 -196381822 + L1ME3A LINE L1 5411 5834 -336 1014 209 87 0 chr5 3248332 3248528 -196381622 + MER58A DNA MER1_type 1 213 -11 1873 194 65 7 chr5 3249224 3249627 -196380523 + MER95 LTR ERV 6 431 0 437 283 62 24 chr5 3249816 3250210 -196379940 - LTR16A LTR ERVL -1 449 2 2016 138 0 0 chr5 3250832 3251130 -196379020 + AluSx SINE Alu 1 298 -14 248 241 0 0 chr5 3251322 3251376 -196378774 - L1M4 LINE L1 -1324 4822 4769 2090 95 20 10 chr5 3252828 3253124 -196377026 + AluSq SINE Alu 1 299 -14 2388 61 0 26 chr5 3253146 3253457 -196376693 - AluY SINE Alu -7 304 2 255 337 119 42 chr5 3253630 3253915 -196376235 - L3 LINE CR1 -713 864 558 2248 73 7 3 chr5 3254758 3255058 -196375092 + AluY SINE Alu 1 301 -10 1132 251 46 28 chr5 3256526 3256893 -196373257 - MER96B DNA MER1_type? -4 413 40 436 240 21 0 chr5 3256893 3256989 -196373161 + MLT1C LTR MaLR 1 98 -369 2104 197 47 11 chr5 3256989 3257461 -196372689 + L1MA6 LINE L1 5483 5971 -329 245 275 65 58 chr5 3257641 3257779 -196372371 + MIR SINE MIR 109 247 -15 258 81 0 0 chr5 3258091 3258128 -196372022 + (TG)n Simple_repeat Simple_repeat 2 38 0 1430 225 38 3 chr5 3261577 3261924 -196368226 - L1MB4 LINE L1 -1 6179 5821 848 169 6 0 chr5 3262941 3263119 -196367031 + (ATG)n Simple_repeat Simple_repeat 2 180 0 737 202 6 0 chr5 3263150 3263508 -196366642 + (ATG)n Simple_repeat Simple_repeat 1 360 0 213 196 0 0 chr5 3263524 3263570 -196366580 + (ATG)n Simple_repeat Simple_repeat 1 46 0 185 235 0 0 chr5 3263588 3263622 -196366528 - L2 LINE L2 -19 3294 3261 230 0 33 0 chr5 3265627 3265657 -196364493 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 317 259 95 41 chr5 3265935 3266211 -196363939 + L1ME LINE L1 1072 1374 -5156 2365 38 10 0 chr5 3266211 3266503 -196363647 + AluY SINE Alu 1 295 -16 317 259 95 41 chr5 3266503 3266593 -196363557 + L1ME LINE L1 1374 1458 -5072 235 188 50 38 chr5 3266594 3266674 -196363476 + L1ME LINE L1 1361 1441 -5099 1968 143 10 0 chr5 3268613 3268907 -196361243 + AluSx SINE Alu 1 297 -15 189 269 88 81 chr5 3271124 3271284 -196358866 + MIR SINE MIR 102 262 0 186 43 0 0 chr5 3272690 3272713 -196357437 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 537 259 131 27 chr5 3274364 3274397 -196355753 - MER5C DNA MER1_type 0 324 296 362 21 21 0 chr5 3274397 3274444 -196355706 + (TG)n Simple_repeat Simple_repeat 2 49 0 537 259 131 27 chr5 3274444 3274669 -196355481 - MER5C DNA MER1_type -28 296 39 291 262 74 50 chr5 3275969 3276155 -196353995 + MIR3 SINE MIR 4 195 -63 394 305 92 0 chr5 3276514 3276655 -196353495 + MIR3 SINE MIR 18 171 -37 250 285 82 70 chr5 3277074 3277232 -196352918 + MIR SINE MIR 61 220 -42 238 217 0 0 chr5 3278341 3278387 -196351763 - L2 LINE L2 -1 3312 3267 301 253 129 93 chr5 3278820 3279045 -196351105 + L1ME LINE L1 2315 2547 -3993 4387 257 91 25 chr5 3279065 3281097 -196349053 + L1ME LINE L1 2472 4590 -1950 575 293 124 18 chr5 3282218 3282443 -196347707 - MIR SINE MIR 0 262 14 1809 123 8 0 chr5 3282596 3282839 -196347311 - AluSq SINE Alu -64 249 5 2155 120 0 13 chr5 3283493 3283802 -196346348 - AluSx SINE Alu -7 305 1 3733 178 22 38 chr5 3285829 3286611 -196343539 - LTR1 LTR ERV1 0 785 17 186 71 0 0 chr5 3288372 3288400 -196341750 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 574 214 41 0 chr5 3288526 3288705 -196341445 - L1MB3 LINE L1 -219 5952 5754 2062 139 0 16 chr5 3288738 3289048 -196341102 + AluSc SINE Alu 1 305 -4 2268 177 46 15 chr5 3294798 3295273 -196334877 - L1M2 LINE L1 -500 5812 5323 457 242 105 26 chr5 3295291 3295599 -196334551 - L1MCa LINE L1 -3862 2564 2221 1848 144 58 0 chr5 3295599 3295715 -196334435 + AluSx SINE Alu 2 110 -202 222 37 0 0 chr5 3295715 3295742 -196334408 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 1848 144 58 0 chr5 3295742 3295903 -196334247 + AluSx SINE Alu 110 295 -17 457 242 105 26 chr5 3295903 3295975 -196334175 - L1MCa LINE L1 -4205 2221 2156 317 260 135 10 chr5 3295976 3296080 -196334070 - L1 LINE L1 -944 5202 5086 834 179 5 58 chr5 3296085 3296185 -196333965 + L1 LINE L1 5171 5275 -871 2034 152 10 0 chr5 3296185 3296482 -196333668 + AluSx SINE Alu 1 300 -12 834 179 5 58 chr5 3296482 3296604 -196333546 + L1 LINE L1 5275 5381 -765 1822 160 30 3 chr5 3296604 3296936 -196333214 - MER6 DNA MER2_type 0 865 265 466 248 185 57 chr5 3296936 3296974 -196333176 - L1MCa LINE L1 -5992 434 402 1376 158 153 78 chr5 3296974 3297321 -196332829 + THE1C LTR MaLR 1 373 -2 466 248 185 57 chr5 3297321 3297649 -196332501 - L1MCa LINE L1 -6024 402 21 1986 144 48 17 chr5 3297718 3298073 -196332077 + MER47A DNA MER2_type 1 366 0 2243 116 20 0 chr5 3298533 3298834 -196331316 - AluSc SINE Alu -2 307 1 2197 132 28 25 chr5 3299861 3300216 -196329934 - THE1B LTR MaLR 0 364 9 11493 94 18 11 chr5 3300224 3301555 -196328595 - THE1B-int LTR MaLR 0 1580 235 2331 62 0 0 chr5 3301555 3301828 -196328322 - AluY SINE Alu -12 299 27 11493 94 18 11 chr5 3301828 3302065 -196328085 - THE1B-int LTR MaLR -1345 235 1 2392 126 36 22 chr5 3302066 3302424 -196327726 - THE1B LTR MaLR -1 363 1 222 91 0 0 chr5 3304283 3304316 -196325834 + (TCC)n Simple_repeat Simple_repeat 2 34 0 319 111 0 0 chr5 3305283 3305328 -196324822 - THE1B LTR MaLR 0 428 384 1012 87 24 0 chr5 3305328 3305455 -196324695 + AluSq/x SINE Alu 1 130 -182 204 326 84 0 chr5 3306081 3306176 -196323974 + MER5A DNA MER1_type 4 106 -83 182 320 100 10 chr5 3306951 3307051 -196323099 + L2 LINE L2 3150 3258 -14 418 226 0 57 chr5 3307151 3307275 -196322875 - MIR SINE MIR -56 206 90 242 265 39 29 chr5 3309825 3309927 -196320223 + HAL1 LINE L1 769 871 -1636 531 250 5 75 chr5 3309927 3310139 -196320011 + MER3 DNA MER1_type 13 209 0 368 367 29 0 chr5 3310174 3310313 -196319837 + HAL1 LINE L1 1678 1820 -687 553 241 4 12 chr5 3310358 3310625 -196319525 + GA-rich Low_complexity Low_complexity 1 264 0 215 77 0 26 chr5 3310744 3310783 -196319367 + (TG)n Simple_repeat Simple_repeat 2 39 0 276 209 88 0 chr5 3311159 3311250 -196318900 + MER5A DNA MER1_type 26 124 -65 474 300 106 34 chr5 3313319 3314024 -196316126 - L2 LINE L2 -188 3125 2370 289 271 74 25 chr5 3317720 3317842 -196312308 - LTR68 LTR ERV1 -606 134 7 185 0 0 39 chr5 3319081 3319107 -196311043 + (CAGA)n Simple_repeat Simple_repeat 1 25 0 1538 214 30 32 chr5 3321479 3321852 -196308298 + MLT1A2 LTR MaLR 3 374 0 432 245 91 22 chr5 3321893 3322093 -196308057 - MLT1H LTR MaLR -294 255 1 4781 201 49 19 chr5 3322137 3322729 -196307421 - L1MC2 LINE L1 -9 6335 5762 2044 128 34 0 chr5 3322729 3323025 -196307125 + AluSx SINE Alu 1 306 -6 4781 201 49 19 chr5 3323025 3323733 -196306417 - L1MC2 LINE L1 -582 5762 4985 558 248 14 7 chr5 3323760 3323901 -196306249 - MER69A DNA AcHobo -33 144 3 513 0 0 0 chr5 3325163 3325220 -196304930 + (TC)n Simple_repeat Simple_repeat 2 58 0 375 23 0 0 chr5 3325219 3325263 -196304887 + (TA)n Simple_repeat Simple_repeat 1 44 0 * 2569 147 19 9 chr5 3325271 3325590 -196304560 - L1PA16 LINE L1 -21 6145 5820 2347 138 5 22 chr5 3325590 3325960 -196304190 + THE1B LTR MaLR 1 364 0 2569 147 19 9 chr5 3325960 3326062 -196304088 - L1PA16 LINE L1 -346 5820 5720 1707 105 23 11 chr5 3328017 3328283 -196301867 - AluSq SINE Alu -12 301 33 183 186 0 0 chr5 3329708 3329751 -196300399 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 3530 76 2 0 chr5 3329784 3330242 -196299908 + L1PA5 LINE L1 5694 6152 -2 2570 83 9 0 chr5 3330242 3330583 -196299567 + L1PA8 LINE L1 5814 6166 -6 424 343 17 14 chr5 3333766 3334131 -196296019 + (TG)n Simple_repeat Simple_repeat 1 366 0 267 223 21 98 chr5 3334105 3334298 -196295852 + (CATG)n Simple_repeat Simple_repeat 1 178 0 * 345 331 23 17 chr5 3334244 3334416 -196295734 + (TG)n Simple_repeat Simple_repeat 2 174 0 2052 104 0 7 chr5 3335466 3335788 -196294362 - AluSq SINE Alu 0 313 1 392 188 12 47 chr5 3336186 3336271 -196293879 - MER5A DNA MER1_type -83 106 25 275 346 115 6 chr5 3337063 3337219 -196292931 - MER5B DNA MER1_type -3 175 3 202 196 39 0 chr5 3337779 3337830 -196292320 + A-rich Low_complexity Low_complexity 4 56 0 3176 262 31 35 chr5 3338272 3339832 -196290318 + L1MA7 LINE L1 1 1672 -4609 9272 203 43 9 chr5 3339835 3342378 -196287772 + L1MA7 LINE L1 2902 5608 -771 1891 170 40 37 chr5 3342378 3342779 -196287371 + L1MA7 LINE L1 6094 6495 0 9272 203 43 9 chr5 3342779 3342797 -196287353 + L1MA7 LINE L1 5608 5624 -755 183 374 94 6 chr5 3343195 3343366 -196286784 - L2 LINE L2 -459 2855 2670 408 317 45 60 chr5 3343544 3343897 -196286253 - L2 LINE L2 -927 2387 2040 243 261 0 14 chr5 3344205 3344274 -196285876 + GA-rich Low_complexity Low_complexity 2 69 0 445 287 125 37 chr5 3345340 3345556 -196284594 - MIR SINE MIR -6 256 22 2069 250 70 14 chr5 3345594 3346151 -196283999 - MLT1E LTR MaLR -5 588 1 734 148 22 44 chr5 3346421 3346556 -196283594 - FLAM_C SINE Alu -10 133 2 264 213 0 0 chr5 3348625 3348672 -196281478 - L2 LINE L2 -7 3265 3219 215 91 0 23 chr5 3351392 3351436 -196278714 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1164 244 75 49 chr5 3351776 3352227 -196277923 - MLT1C LTR MaLR -4 463 1 417 301 70 21 chr5 3352294 3352480 -196277670 - L1M4 LINE L1 -1496 4886 4692 706 160 92 23 chr5 3352492 3352623 -196277527 + THE1C LTR MaLR 1 140 -235 2822 174 8 4 chr5 3352650 3353161 -196276989 + HSMAR2 DNA Mariner 169 681 -621 228 117 33 17 chr5 3353225 3353285 -196276865 + (TA)n Simple_repeat Simple_repeat 2 62 0 972 215 59 19 chr5 3353309 3353565 -196276585 - L1MA9 LINE L1 -39 6273 6008 * 1560 275 81 67 chr5 3353562 3354174 -196275976 - L1M4 LINE L1 -3884 2500 1898 1870 142 0 4 chr5 3354174 3354455 -196275695 + AluSx SINE Alu 3 282 -30 1560 275 81 67 chr5 3354455 3355017 -196275133 - L1M4 LINE L1 -4486 1898 1345 1886 154 0 0 chr5 3355017 3355310 -196274840 - AluSx SINE Alu -19 293 1 1560 275 81 67 chr5 3355310 3355864 -196274286 - L1M4 LINE L1 -5039 1345 747 365 275 118 55 chr5 3356038 3356384 -196273766 - L1MEd LINE L1 -1193 1297 1003 6871 253 67 12 chr5 3356434 3358032 -196272118 + L1PA13 LINE L1 1 1685 -5896 8291 244 35 25 chr5 3358050 3360284 -196269866 + L1PA13 LINE L1 2461 4725 -2859 2106 119 0 6 chr5 3360284 3360596 -196269554 + AluSx SINE Alu 1 310 -2 8291 244 35 25 chr5 3360596 3360910 -196269240 + L1PA13 LINE L1 4725 5034 -2550 8232 196 17 6 chr5 3360932 3363395 -196266755 + L1PA13 LINE L1 5120 7601 0 288 250 28 0 chr5 3364399 3364471 -196265679 + MIR SINE MIR 79 152 -56 1623 224 83 25 chr5 3365591 3366037 -196264113 - MER63C DNA MER1_type -213 717 246 1465 214 31 13 chr5 3367333 3367716 -196262434 + MLT1B LTR MaLR 1 390 0 394 291 14 20 chr5 3370590 3370738 -196259412 + (CATA)n Simple_repeat Simple_repeat 4 150 0 373 333 6 22 chr5 3370688 3370871 -196259279 + (CA)n Simple_repeat Simple_repeat 1 180 0 * 424 322 0 23 chr5 3370883 3371054 -196259096 + (CA)n Simple_repeat Simple_repeat 2 168 0 2352 89 47 39 chr5 3371103 3371464 -196258686 + THE1B LTR MaLR 1 364 0 916 213 77 5 chr5 3371848 3372069 -196258081 + MLT1A1 LTR MaLR 129 365 0 23 0 0 0 chr5 3372774 3372797 -196257353 + AT_rich Low_complexity Low_complexity 1 23 0 561 261 22 0 chr5 3372980 3373118 -196257032 + MER58A DNA MER1_type 37 177 -47 326 221 132 42 chr5 3373791 3373981 -196256169 + LTR33A LTR ERVL 268 474 -49 195 42 0 0 chr5 3375243 3375267 -196254883 + (A)n Simple_repeat Simple_repeat 1 24 0 1408 193 27 24 chr5 3376553 3376849 -196253301 + AluJo SINE Alu 1 297 -15 364 328 8 0 chr5 3376857 3376991 -196253159 - HAL1 LINE L1 -125 2382 2248 231 36 0 0 chr5 3377016 3377044 -196253106 + (CA)n Simple_repeat Simple_repeat 1 28 0 394 297 108 43 chr5 3377251 3377483 -196252667 - HAL1 LINE L1 -650 1857 1611 531 250 0 0 chr5 3378462 3378626 -196251524 + (CA)n Simple_repeat Simple_repeat 2 165 0 210 246 0 35 chr5 3378627 3378684 -196251466 + (CACG)n Simple_repeat Simple_repeat 1 55 0 2038 138 165 8 chr5 3379789 3380159 -196249991 + MSTA LTR MaLR 1 428 0 1030 147 32 6 chr5 3380187 3380343 -196249807 + FRAM SINE Alu 1 157 -19 2188 123 0 3 chr5 3380502 3380802 -196249348 - AluSc SINE Alu -9 300 2 255 309 71 83 chr5 3381135 3381303 -196248847 + L3b LINE CR1 1344 1509 -74 2324 118 52 6 chr5 3382229 3382577 -196247573 - THE1B LTR MaLR 0 364 1 202 363 118 0 chr5 3383953 3384055 -196246095 - L2 LINE L2 0 3313 3200 1891 55 4 12 chr5 3384476 3384731 -196245419 - L1P3 LINE L1 -533 5621 5369 1462 98 0 0 chr5 3384731 3384924 -196245226 + L1PA7 LINE L1 5960 6153 -1 3929 216 118 69 chr5 3385249 3387617 -196242533 + L1MD1 LINE L1 19 2271 -4269 1550 186 29 7 chr5 3387617 3387897 -196242253 + AluJb SINE Alu 3 288 -24 225 65 0 0 chr5 3387901 3387932 -196242218 + (CATA)n Simple_repeat Simple_repeat 2 32 0 3929 216 118 69 chr5 3387932 3388024 -196242126 + L1MD1 LINE L1 2273 2680 -3860 3212 214 64 61 chr5 3388032 3389075 -196241075 + L1MD1 LINE L1 4974 6013 -623 2434 65 0 7 chr5 3389075 3389392 -196240758 - AluY SINE Alu 0 311 2 3212 214 64 61 chr5 3389392 3389419 -196240731 + L1MD1 LINE L1 6013 6038 -598 2210 184 37 16 chr5 3389419 3389678 -196240472 - MER65A LTR ERV1 0 445 172 315 0 0 0 chr5 3389678 3389713 -196240437 + (TG)n Simple_repeat Simple_repeat 1 35 0 2210 184 37 16 chr5 3389713 3389889 -196240261 - MER65A LTR ERV1 -273 172 1 3212 214 64 61 chr5 3389889 3390381 -196239769 + L1MD1 LINE L1 6038 6528 -108 2767 29 7 0 chr5 3390381 3390690 -196239460 + AluY SINE Alu 1 311 0 3212 214 64 61 chr5 3390690 3390751 -196239399 + L1MD1 LINE L1 6528 6587 -49 210 37 0 0 chr5 3391945 3391972 -196238178 + (CA)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr5 3391971 3391991 -196238159 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 308 158 13 0 chr5 3392090 3392166 -196237984 + (CA)n Simple_repeat Simple_repeat 2 78 0 213 204 23 23 chr5 3392185 3392273 -196237877 + (CA)n Simple_repeat Simple_repeat 2 89 0 632 229 19 61 chr5 3392871 3393085 -196237065 - MER101 LTR ERV1 -19 455 251 386 248 152 21 chr5 3393257 3393402 -196236748 - MER101 LTR ERV1 -302 172 9 460 213 31 55 chr5 3393660 3393787 -196236363 - MER5A DNA MER1_type -2 187 64 2374 100 3 0 chr5 3394015 3394316 -196235834 - AluSx SINE Alu -10 302 1 2472 63 0 13 chr5 3394746 3395047 -196235103 + AluY SINE Alu 1 297 -14 745 251 26 11 chr5 3396144 3396335 -196233815 + MLT1B LTR MaLR 195 388 -2 294 29 0 0 chr5 3397207 3397242 -196232908 + (TG)n Simple_repeat Simple_repeat 1 35 0 2197 112 6 34 chr5 3397737 3398058 -196232092 - AluSx SINE Alu 0 312 1 327 226 13 7 chr5 3401713 3401868 -196228282 + GA-rich Low_complexity Low_complexity 1 156 0 218 343 55 0 chr5 3403123 3403196 -196226954 + MIR SINE MIR 116 192 -70 306 204 68 116 chr5 3404901 3405048 -196225102 - MLT1B LTR MaLR -246 144 5 323 285 85 48 chr5 3406364 3406529 -196223621 + L1MC/D LINE L1 5537 5707 -2101 494 244 125 0 chr5 3407252 3407412 -196222738 + MER31B LTR ERV1 2 181 -285 1078 233 94 36 chr5 3407822 3408260 -196221890 + MER101 LTR ERV1 12 474 0 5271 149 16 6 chr5 3409888 3411119 -196219031 - L1PA15 LINE L1 -21 6144 4902 1233 193 7 15 chr5 3411110 3411380 -196218770 + L1PA15 LINE L1 4619 4886 -1260 * 463 209 19 19 chr5 3412639 3412797 -196217353 + A-rich Low_complexity Low_complexity 5 162 0 225 233 0 50 chr5 3412798 3412830 -196217320 + GA-rich Low_complexity Low_complexity 4 33 -27 2311 91 7 0 chr5 3412830 3413128 -196217022 + AluSq SINE Alu 13 312 -1 225 233 0 50 chr5 3413128 3413155 -196216995 + GA-rich Low_complexity Low_complexity 33 60 0 211 260 100 0 chr5 3413421 3413471 -196216679 - MER5A DNA MER1_type -5 184 130 1606 180 4 0 chr5 3413661 3413973 -196216177 - AluJb SINE Alu 0 312 33 2044 171 84 3 chr5 3414219 3414610 -196215540 + MSTB LTR MaLR 4 426 0 2360 233 33 32 chr5 3416353 3417045 -196213105 + L1MD2 LINE L1 5473 6165 -194 237 320 21 10 chr5 3417049 3417146 -196213004 + (CA)n Simple_repeat Simple_repeat 1 98 0 441 311 0 39 chr5 3417163 3417343 -196212807 + (CA)n Simple_repeat Simple_repeat 1 173 0 377 197 26 0 chr5 3417348 3417424 -196212726 + L1MD2 LINE L1 6139 6216 -143 310 278 61 0 chr5 3417532 3417647 -196212503 + L1MD2 LINE L1 6230 6351 -8 1792 132 3 31 chr5 3417653 3417942 -196212208 - AluSg1 SINE Alu -18 291 11 803 196 0 6 chr5 3421913 3422092 -196208058 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 219 300 17 0 chr5 3422092 3422152 -196207998 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 330 106 0 0 chr5 3424451 3424498 -196205652 + Alu SINE Alu 1 47 -256 354 128 0 0 chr5 3424510 3424573 -196205577 + Alu SINE Alu 1 47 -255 2209 92 7 0 chr5 3424599 3424882 -196205268 + AluSx SINE Alu 1 285 -27 222 274 186 18 chr5 3425792 3425905 -196204245 + MIR SINE MIR 13 144 -118 2191 130 0 0 chr5 3426531 3426832 -196203318 + AluSg SINE Alu 1 301 -9 2312 108 22 24 chr5 3427775 3428144 -196202006 + L1PA11 LINE L1 5746 6113 -61 215 91 0 23 chr5 3428248 3428292 -196201858 + (TC)n Simple_repeat Simple_repeat 1 43 0 333 68 0 0 chr5 3428303 3428347 -196201803 + (GGA)n Simple_repeat Simple_repeat 3 46 0 317 237 13 0 chr5 3429780 3429856 -196200294 + MER103 DNA DNA 8 84 -82 462 274 7 28 chr5 3430496 3430704 -196199446 + C-rich Low_complexity Low_complexity 1 203 0 608 231 82 33 chr5 3432109 3432423 -196197727 + MLT1A1 LTR MaLR 4 354 -36 25 0 0 0 chr5 3433033 3433058 -196197092 + AT_rich Low_complexity Low_complexity 1 25 0 2257 115 128 13 chr5 3433443 3433827 -196196323 - MSTA LTR MaLR 0 428 1 29 28 0 0 chr5 3433959 3433995 -196196155 + AT_rich Low_complexity Low_complexity 1 36 0 1988 211 42 68 chr5 3434113 3434757 -196195393 - MER63C DNA MER1_type -303 627 1 329 335 62 40 chr5 3434760 3434936 -196195214 + L1M4 LINE L1 3742 3921 -2225 277 261 23 0 chr5 3435383 3435471 -196194679 + L1M4 LINE L1 4137 4226 -1920 2316 109 0 6 chr5 3435862 3436175 -196193975 - AluSq SINE Alu -2 311 1 228 143 0 0 chr5 3436198 3436240 -196193910 + (T)n Simple_repeat Simple_repeat 1 42 0 21 36 0 0 chr5 3436653 3436681 -196193469 + AT_rich Low_complexity Low_complexity 1 28 0 299 276 57 57 chr5 3437113 3437225 -196192925 - L1ME4a LINE L1 -158 5963 5852 4839 95 6 13 chr5 3437225 3437912 -196192238 - L1PA8A LINE L1 -4 6127 5446 299 276 57 57 chr5 3437912 3438082 -196192068 - L1ME4a LINE L1 -268 5853 5681 23 0 0 0 chr5 3438829 3438852 -196191298 + AT_rich Low_complexity Low_complexity 1 23 0 200 309 0 0 chr5 3439228 3439325 -196190825 + (GGATG)n Simple_repeat Simple_repeat 1 97 0 399 41 0 0 chr5 3439828 3439877 -196190273 + (GA)n Simple_repeat Simple_repeat 2 50 0 231 245 0 0 chr5 3442907 3443001 -196187149 + (CA)n Simple_repeat Simple_repeat 2 95 0 558 246 2 0 chr5 3445863 3446446 -196183704 + (CA)n Simple_repeat Simple_repeat 1 584 0 247 237 0 0 chr5 3446573 3446632 -196183518 + (TG)n Simple_repeat Simple_repeat 2 60 0 310 274 11 11 chr5 3446633 3446728 -196183422 + (CA)n Simple_repeat Simple_repeat 2 96 0 225 322 35 0 chr5 3446747 3446834 -196183316 + MIR3 SINE MIR 82 171 -37 357 187 0 0 chr5 3446961 3447036 -196183114 + (CA)n Simple_repeat Simple_repeat 1 75 0 201 241 0 0 chr5 3447109 3447163 -196182987 + (CA)n Simple_repeat Simple_repeat 1 54 0 231 356 11 0 chr5 3447315 3447405 -196182745 + (CACG)n Simple_repeat Simple_repeat 1 91 0 210 286 0 18 chr5 3447716 3447772 -196182378 + GA-rich Low_complexity Low_complexity 2 56 0 32 75 0 0 chr5 3447940 3448007 -196182143 + AT_rich Low_complexity Low_complexity 1 67 0 303 28 0 0 chr5 3448474 3448510 -196181640 + (CA)n Simple_repeat Simple_repeat 1 36 0 263 272 54 17 chr5 3450580 3450838 -196179312 + MLT1A1 LTR MaLR 48 363 -11 203 333 29 0 chr5 3453593 3453662 -196176488 - L2 LINE L2 -16 3297 3227 1534 253 98 48 chr5 3454015 3454599 -196175551 + L1MCb LINE L1 717 1270 -5475 405 0 0 0 chr5 3454599 3454644 -196175506 + (CA)n Simple_repeat Simple_repeat 2 46 0 1534 253 98 48 chr5 3454644 3455711 -196174439 + L1MCb LINE L1 1270 2732 -4013 323 135 0 0 chr5 3455737 3455789 -196174361 - MLT2B1 LTR ERVL 0 520 469 305 258 32 21 chr5 3455814 3455907 -196174243 + L1MC4 LINE L1 6615 6708 -1334 * 315 178 19 122 chr5 3455867 3455974 -196174176 - L1MC4 LINE L1 -1333 6709 6614 12075 85 14 12 chr5 3456139 3457818 -196172332 - HERVL LTR ERVL -429 5225 3545 456 326 63 40 chr5 3457842 3458385 -196171765 + L1MEc LINE L1 1714 2268 -4128 1073 149 5 0 chr5 3458505 3458706 -196171444 - L1P LINE L1 -3603 2543 2342 7545 194 9 32 chr5 3458707 3461042 -196169108 + L1PA14 LINE L1 3813 6159 -2 1289 130 5 9 chr5 3461042 3461257 -196168893 + L1MA4A LINE L1 5772 5985 -318 1411 126 10 0 chr5 3461309 3461507 -196168643 - AluSc SINE Alu -5 304 105 1679 199 30 60 chr5 3462946 3463348 -196166802 - MLT1B LTR MaLR 0 390 1 280 230 10 10 chr5 3463597 3463697 -196166453 + GA-rich Low_complexity Low_complexity 3 102 0 265 306 41 54 chr5 3463699 3463846 -196166304 - MIR SINE MIR -16 246 102 275 200 0 0 chr5 3464268 3464318 -196165832 - Alu SINE Alu -253 50 1 823 205 18 0 chr5 3464318 3464489 -196165661 + L1MA4A LINE L1 6059 6232 -71 238 92 46 62 chr5 3465926 3465991 -196164159 + L1PA16 LINE L1 6100 6163 -3 1714 249 133 26 chr5 3466495 3467230 -196162920 + L1ME2 LINE L1 46 757 -5288 2326 96 3 0 chr5 3467269 3467571 -196162579 + AluSg SINE Alu 4 306 -4 222 297 47 0 chr5 3468492 3468556 -196161594 + MER5A DNA MER1_type 35 101 -88 23 0 0 0 chr5 3468609 3468632 -196161518 + AT_rich Low_complexity Low_complexity 1 23 0 187 320 126 0 chr5 3471567 3471670 -196158480 - L3 LINE CR1 -551 1026 911 355 303 123 20 chr5 3473802 3473997 -196156153 + L3 LINE CR1 773 987 -590 2116 129 3 7 chr5 3474584 3474886 -196155264 - AluSx SINE Alu -11 301 1 200 79 105 0 chr5 3478835 3478873 -196151277 - MER5B DNA MER1_type -134 44 3 25 0 0 0 chr5 3481029 3481054 -196149096 + AT_rich Low_complexity Low_complexity 1 25 0 237 333 29 10 chr5 3481494 3481596 -196148554 - MIR SINE MIR -79 183 80 459 229 0 8 chr5 3481791 3481913 -196148237 + L1ME2 LINE L1 3131 3251 -3313 785 273 188 14 chr5 3481926 3482358 -196147792 + L1ME2 LINE L1 4895 5401 -1163 959 262 62 18 chr5 3482395 3482958 -196147192 + L1ME2 LINE L1 5460 6043 -541 911 247 83 43 chr5 3483378 3483864 -196146286 + L1ME2 LINE L1 6032 6535 -47 198 327 101 24 chr5 3484674 3484842 -196145308 - MIR SINE MIR -73 189 9 1047 236 57 20 chr5 3485439 3485736 -196144414 - MER54B LTR ERVL 0 793 486 214 91 0 45 chr5 3486874 3486918 -196143232 + (CCCTAA)n Simple_repeat Simple_repeat 1 42 0 826 180 8 0 chr5 3487732 3488089 -196142061 + (TCCA)n Simple_repeat Simple_repeat 1 360 0 795 177 12 0 chr5 3488106 3488361 -196141789 + (TCCA)n Simple_repeat Simple_repeat 1 258 0 489 219 0 0 chr5 3488373 3488487 -196141663 + (TCCA)n Simple_repeat Simple_repeat 2 115 0 316 307 34 0 chr5 3488487 3488575 -196141575 - L2 LINE L2 0 3313 3223 23 0 0 0 chr5 3488928 3488951 -196141199 + AT_rich Low_complexity Low_complexity 1 23 0 2164 82 43 0 chr5 3490575 3490856 -196139294 + AluY SINE Alu 1 293 -18 210 203 17 17 chr5 3491754 3491813 -196138337 + GA-rich Low_complexity Low_complexity 3 61 0 227 240 91 109 chr5 3492298 3492473 -196137677 - MIR SINE MIR -25 183 1 374 91 0 0 chr5 3494261 3494316 -196135834 - MLT2A2 LTR ERVL 0 453 399 224 169 70 28 chr5 3494320 3494462 -196135688 + (TA)n Simple_repeat Simple_repeat 1 148 0 235 167 19 0 chr5 3494406 3494460 -196135690 + (TATAA)n Simple_repeat Simple_repeat 5 59 0 2147 126 10 0 chr5 3495437 3495739 -196134411 - AluSx SINE Alu -7 305 1 427 315 34 7 chr5 3498721 3498867 -196131283 - MIR SINE MIR -46 216 67 505 259 79 41 chr5 3499037 3499462 -196130688 - MLT1D LTR MaLR -17 450 1 269 252 145 23 chr5 3500415 3500546 -196129604 + MLT1L LTR MaLR 237 419 -128 479 222 19 0 chr5 3502541 3502649 -196127501 + HY1 scRNA scRNA 1 110 -2 683 74 0 54 chr5 3502842 3502991 -196127159 + (TTAGGG)n Simple_repeat Simple_repeat 1 141 0 632 323 76 56 chr5 3503228 3503652 -196126498 + HAL1b LINE L1 4 354 -994 348 127 0 0 chr5 3503652 3503707 -196126443 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 404 281 90 36 chr5 3503708 3503875 -196126275 + HAL1b LINE L1 339 514 -834 732 290 72 28 chr5 3504816 3505358 -196124792 - L1MEc LINE L1 -3207 2922 2357 2293 109 0 13 chr5 3505402 3505715 -196124435 - AluSg SINE Alu -1 309 1 665 321 79 44 chr5 3505772 3506533 -196123617 - L1MEc LINE L1 -3890 2239 1436 285 256 25 113 chr5 3506636 3506839 -196123311 - L1MEc LINE L1 -4862 1257 1073 335 224 82 112 chr5 3506840 3507036 -196123114 - L1MEc LINE L1 -5100 1019 830 621 200 0 0 chr5 3507042 3507177 -196122973 + FRAM SINE Alu 38 172 0 314 288 73 110 chr5 3507177 3507396 -196122754 - L1MEc LINE L1 -5306 813 603 23 0 0 0 chr5 3507652 3507675 -196122475 + AT_rich Low_complexity Low_complexity 1 23 0 1160 166 5 0 chr5 3507675 3507880 -196122270 - L1PB1 LINE L1 -1 6150 5945 3042 167 22 8 chr5 3507945 3509018 -196121132 + L1M1 LINE L1 4688 5780 -523 * 5877 206 8 5 chr5 3509016 3510335 -196119815 - L1P LINE L1 -2314 3832 2509 2937 92 5 2 chr5 3510435 3510860 -196119290 - L1PA7 LINE L1 -72 6082 5657 1324 42 0 12 chr5 3513815 3513981 -196116169 - L1PA5 LINE L1 -1 6153 5990 2173 30 0 0 chr5 3513981 3514245 -196115905 + L1PA5 LINE L1 5710 5973 -182 184 306 40 40 chr5 3516325 3516449 -196113701 - L2 LINE L2 -11 3261 3138 333 0 0 0 chr5 3518506 3518543 -196111607 + (T)n Simple_repeat Simple_repeat 1 37 0 8514 212 56 74 chr5 3723792 3724083 -195906067 - L1MA6 LINE L1 -237 7482 7187 892 233 165 45 chr5 3724083 3724349 -195905801 - AluJb SINE Alu -4 298 1 8514 212 56 74 chr5 3724349 3725774 -195904376 - L1MA6 LINE L1 -532 7187 5737 1793 162 7 10 chr5 3725774 3726070 -195904080 - AluSx SINE Alu -17 295 1 8514 212 56 74 chr5 3726070 3727772 -195902378 - L1MA6 LINE L1 -1982 5737 4005 1451 131 40 33 chr5 3727772 3728046 -195902104 - AluSq SINE Alu -7 306 31 8514 212 56 74 chr5 3728046 3728147 -195902003 - L1MA6 LINE L1 -3714 4005 3904 244 250 0 0 chr5 3728147 3728207 -195901943 - AluS SINE Alu -241 60 1 8514 212 56 74 chr5 3728207 3730340 -195899810 - L1MA6 LINE L1 -3815 3904 1884 258 393 28 7 chr5 3730441 3730701 -195899449 - L1M3a LINE L1 -5227 728 357 276 341 52 12 chr5 3730823 3731112 -195899038 - L1M3a LINE L1 -5196 759 541 1030 311 39 30 chr5 3731167 3731743 -195898407 - L1M3a LINE L1 -5195 760 2 254 314 161 0 chr5 3732007 3732125 -195898025 + L1MEc LINE L1 37 173 -6223 1352 296 44 2 chr5 3732521 3732977 -195897173 + LTR16C LTR ERVL 2 476 -15 819 245 61 32 chr5 3734013 3734291 -195895859 - MLT1F1 LTR MaLR 0 567 282 181 320 31 21 chr5 3734611 3734708 -195895442 + MIR3 SINE MIR 101 198 -10 732 215 55 100 chr5 3736197 3736578 -195893572 - L1MD1 LINE L1 -12 6230 5867 625 157 9 0 chr5 3736864 3736972 -195893178 - MLT1B LTR MaLR -3 387 279 1033 248 158 25 chr5 3737717 3738153 -195891997 + MLT1D LTR MaLR 12 505 0 238 343 35 14 chr5 3739001 3739144 -195891006 - MIR SINE MIR -81 181 36 477 0 0 0 chr5 3739259 3739312 -195890838 + (CA)n Simple_repeat Simple_repeat 2 54 0 261 0 0 0 chr5 3739354 3739383 -195890767 + (CA)n Simple_repeat Simple_repeat 2 30 0 333 0 0 0 chr5 3739425 3739462 -195890688 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 0 0 0 chr5 3739462 3739487 -195890663 + (A)n Simple_repeat Simple_repeat 1 25 0 2469 52 0 29 chr5 3740868 3741174 -195888976 - AluY SINE Alu -14 297 1 1353 149 117 25 chr5 3741176 3741457 -195888693 - AluY SINE Alu -4 307 1 999 78 8 0 chr5 3741476 3741605 -195888545 - AluY SINE Alu -181 130 1 964 88 0 0 chr5 3742585 3742721 -195887429 + L1PA14 LINE L1 6023 6158 -3 302 257 57 9 chr5 3744730 3744835 -195885315 - MIR SINE MIR -12 250 141 21 0 0 0 chr5 3746381 3746402 -195883748 + AT_rich Low_complexity Low_complexity 1 21 0 2158 119 3 0 chr5 3747614 3747909 -195882241 - AluSx SINE Alu -16 296 1 231 217 0 0 chr5 3749153 3749213 -195880937 + (CA)n Simple_repeat Simple_repeat 2 61 0 213 310 0 49 chr5 3749699 3749883 -195880267 + G-rich Low_complexity Low_complexity 2 176 0 239 231 52 35 chr5 3749962 3750135 -195880015 + (GGGTG)n Simple_repeat Simple_repeat 5 180 0 394 144 0 76 chr5 3750428 3750546 -195879604 + AluSq/x SINE Alu 8 116 -187 25 65 0 0 chr5 3753979 3754025 -195876125 + AT_rich Low_complexity Low_complexity 1 46 0 315 0 0 0 chr5 3754591 3754626 -195875524 + (CA)n Simple_repeat Simple_repeat 2 36 0 262 214 230 16 chr5 3755197 3755323 -195874827 - MIR SINE MIR -43 219 67 2415 81 0 0 chr5 3755728 3756025 -195874125 - AluY SINE Alu -14 297 1 267 286 36 27 chr5 3756844 3756956 -195873194 + MIR SINE MIR 17 129 -133 2222 120 10 0 chr5 3756982 3757290 -195872860 - AluSp SINE Alu -2 311 1 218 245 0 0 chr5 3758235 3758284 -195871866 - MIR SINE MIR -13 249 201 358 298 8 8 chr5 3758639 3758763 -195871387 - MER5B DNA MER1_type -49 129 6 5648 182 56 10 chr5 3759979 3760498 -195869652 + Tigger3b DNA MER2_type 13 507 -2521 180 0 0 0 chr5 3760498 3760518 -195869632 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 5648 182 56 10 chr5 3760518 3760539 -195869611 + Tigger3b DNA MER2_type 507 526 -2502 2350 119 0 0 chr5 3760539 3760851 -195869299 + AluSx SINE Alu 1 312 0 5648 182 56 10 chr5 3760851 3761475 -195868675 + Tigger3b DNA MER2_type 526 1231 0 1619 46 0 0 chr5 3761810 3762007 -195868143 - L1PA5 LINE L1 0 6154 5958 291 252 84 35 chr5 3762034 3762177 -195867973 - L1ME LINE L1 -450 5671 5522 27 0 0 0 chr5 3762374 3762401 -195867749 + AT_rich Low_complexity Low_complexity 1 27 0 199 239 0 0 chr5 3763085 3763131 -195867019 - MIR SINE MIR -111 151 106 7435 156 26 2 chr5 3763328 3765316 -195864834 - L1PA14 LINE L1 -214 5947 3919 200 83 0 28 chr5 3765316 3765352 -195864798 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7067 26 0 1 chr5 3765352 3766159 -195863991 - L1PA3 LINE L1 -24 6131 5326 6487 34 0 0 chr5 3766156 3766930 -195863220 + L1PA3 LINE L1 4559 5332 -814 * 3957 167 17 21 chr5 3766924 3767117 -195863033 - L1PA14 LINE L1 -2221 3925 3733 * 2295 100 7 0 chr5 3767117 3767416 -195862734 - AluSg SINE Alu -9 301 1 3957 167 17 21 chr5 3767416 3767970 -195862180 - L1PA14 LINE L1 -2413 3733 3181 314 264 241 62 chr5 3768083 3768778 -195861372 - L1M2 LINE L1 -4300 2096 1297 234 0 0 0 chr5 3768942 3768968 -195861182 + (CA)n Simple_repeat Simple_repeat 2 27 0 308 286 52 28 chr5 3769061 3769309 -195860841 - L1ME LINE L1 -5262 808 555 2133 168 32 8 chr5 3769862 3770242 -195859908 - MLT1B LTR MaLR -1 389 1 938 314 99 8 chr5 3770242 3770891 -195859259 + L2 LINE L2 1916 2716 -598 394 282 41 9 chr5 3770925 3771145 -195859005 + L1ME3 LINE L1 4382 4608 -1538 789 62 0 23 chr5 3771153 3771281 -195858869 + (TG)n Simple_repeat Simple_repeat 2 126 0 225 0 0 0 chr5 3771448 3771473 -195858677 + (CA)n Simple_repeat Simple_repeat 2 26 0 978 258 98 43 chr5 3771479 3772222 -195857928 + L1ME3 LINE L1 5121 5921 -241 184 346 80 16 chr5 3772262 3772450 -195857700 + L2 LINE L2 2826 3025 -288 398 313 33 0 chr5 3772467 3772617 -195857533 + L2 LINE L2 3141 3295 -18 241 321 68 21 chr5 3774104 3774294 -195855856 + L2 LINE L2 2881 3079 -234 256 276 67 29 chr5 3774418 3774523 -195855627 + L2 LINE L2 3201 3309 -4 1318 213 135 19 chr5 3776102 3776516 -195853634 + MLT1C LTR MaLR 5 466 -1 255 119 45 15 chr5 3779685 3779752 -195850398 + GA-rich Low_complexity Low_complexity 1 69 0 4106 211 40 34 chr5 3781012 3781048 -195849102 + L1M3 LINE L1 4213 4247 -1936 189 74 0 0 chr5 3781048 3781075 -195849075 + (CA)n Simple_repeat Simple_repeat 1 27 0 4106 211 40 34 chr5 3781075 3782432 -195847718 + L1M3 LINE L1 4247 5613 -570 939 177 0 0 chr5 3782454 3782601 -195847549 + FRAM SINE Alu 6 152 -24 468 91 0 0 chr5 3782610 3782676 -195847474 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 249 33 0 0 chr5 3783522 3783552 -195846598 + (TG)n Simple_repeat Simple_repeat 1 30 0 1726 168 3 18 chr5 3783698 3783984 -195846166 - AluJo SINE Alu -30 282 1 2094 119 0 17 chr5 3791397 3791699 -195838451 - AluSx SINE Alu -15 297 1 1564 218 78 43 chr5 3791840 3792158 -195837992 - MLT1D LTR MaLR 0 505 163 2179 125 0 0 chr5 3792158 3792447 -195837703 - AluSx SINE Alu -23 289 1 1564 218 78 43 chr5 3792447 3792615 -195837535 - MLT1D LTR MaLR -342 163 2 262 371 34 0 chr5 3792993 3793082 -195837068 + L2 LINE L2 3165 3256 -16 430 254 14 14 chr5 3793272 3793410 -195836740 + L2 LINE L2 3175 3312 -1 4206 106 23 2 chr5 3793556 3794159 -195835991 - L1PB2 LINE L1 -114 6037 5422 1043 216 5 10 chr5 3794164 3794368 -195835782 - AluJo SINE Alu -26 286 84 2295 108 0 0 chr5 3794754 3795049 -195835101 + AluSg SINE Alu 1 295 -15 43966 34 18 2 chr5 3797058 3803108 -195827042 + L1PA3 LINE L1 1 6155 0 22 0 0 0 chr5 3803182 3803204 -195826946 + AT_rich Low_complexity Low_complexity 1 22 0 1037 291 40 2 chr5 3803219 3803669 -195826481 + L1M4 LINE L1 4138 4604 -1542 665 175 7 0 chr5 3803679 3803816 -195826334 + (ATG)n Simple_repeat Simple_repeat 1 138 0 255 170 0 0 chr5 3803926 3803973 -195826177 + (ATG)n Simple_repeat Simple_repeat 1 47 0 862 271 116 32 chr5 3804010 3804289 -195825861 + L1M4 LINE L1 4647 4901 -1245 207 0 0 0 chr5 3804289 3804312 -195825838 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 862 271 116 32 chr5 3804312 3804619 -195825531 + L1M4 LINE L1 4901 5282 -864 645 243 34 28 chr5 3805273 3805450 -195824700 - MER20 DNA MER1_type -31 188 11 254 169 34 17 chr5 3806359 3806418 -195823732 + MLT1K LTR MaLR 184 243 -345 341 21 0 21 chr5 3806736 3806783 -195823367 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1298 214 21 32 chr5 3806787 3807072 -195823078 - AluJo SINE Alu -30 282 1 461 198 8 0 chr5 3807120 3807246 -195822904 + (TG)n Simple_repeat Simple_repeat 2 128 0 239 274 0 16 chr5 3807274 3807336 -195822814 - MIR3 SINE MIR -29 179 119 2226 125 0 22 chr5 3807667 3807986 -195822164 + AluSx SINE Alu 1 312 0 392 312 36 84 chr5 3808420 3808776 -195821374 + L3 LINE CR1 1207 1545 -32 291 209 186 0 chr5 3808936 3809022 -195821128 + LTR16A LTR ERVL 242 343 -107 186 349 16 0 chr5 3809860 3809923 -195820227 - MIR3 SINE MIR -3 205 142 216 0 0 0 chr5 3810965 3810989 -195819161 + (T)n Simple_repeat Simple_repeat 1 24 0 565 198 132 56 chr5 3816190 3816387 -195813763 + MER20 DNA MER1_type 7 218 -1 200 32 32 0 chr5 3816937 3816946 -195813204 + (CAA)n Simple_repeat Simple_repeat 2 9 -24 2058 133 0 25 chr5 3816946 3817262 -195812888 + AluSx SINE Alu 1 308 -4 200 32 32 0 chr5 3817262 3817283 -195812867 + (CAA)n Simple_repeat Simple_repeat 9 33 0 225 0 0 0 chr5 3821372 3821397 -195808753 + (T)n Simple_repeat Simple_repeat 1 25 0 596 253 122 90 chr5 3822858 3824506 -195805644 + L1ME1 LINE L1 497 2210 -4186 2120 139 3 3 chr5 3824506 3824816 -195805334 - AluSx SINE Alu -2 310 1 596 253 122 90 chr5 3824816 3824976 -195805174 + L1ME1 LINE L1 2210 2363 -4033 279 169 67 0 chr5 3824982 3825071 -195805079 + (TA)n Simple_repeat Simple_repeat 1 95 0 3586 261 99 43 chr5 3825098 3826420 -195803730 + L1ME1 LINE L1 2861 4108 -2127 222 37 0 0 chr5 3826420 3826447 -195803703 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1838 143 34 0 chr5 3826455 3826721 -195803429 - AluSx SINE Alu -32 280 6 3586 261 99 43 chr5 3826721 3826941 -195803209 + L1ME1 LINE L1 4114 4320 -1915 1235 259 61 5 chr5 3826941 3827316 -195802834 - MSTD LTR MaLR 0 396 1 3586 261 99 43 chr5 3827316 3828856 -195801294 + L1ME1 LINE L1 4320 6131 -104 2541 271 65 31 chr5 3829240 3831172 -195798978 + L1MEc LINE L1 2019 3985 -2230 364 236 32 13 chr5 3831454 3831611 -195798539 + L1MEc LINE L1 2924 3083 -3132 * 573 264 31 23 chr5 3831591 3831852 -195798298 + L1MEc LINE L1 4223 4485 -1730 1357 257 104 48 chr5 3831955 3832512 -195797638 + L1ME3 LINE L1 4228 4753 -1409 186 103 0 0 chr5 3832512 3832541 -195797609 + (CA)n Simple_repeat Simple_repeat 2 30 0 1357 257 104 48 chr5 3832541 3833609 -195796541 + L1ME3 LINE L1 4753 5938 -224 4618 22 2 4 chr5 3834012 3834557 -195795593 - L1PA4 LINE L1 -19 6136 5593 21 0 0 0 chr5 3834562 3834583 -195795567 + AT_rich Low_complexity Low_complexity 1 21 0 216 67 0 0 chr5 3834938 3834968 -195795182 + (CA)n Simple_repeat Simple_repeat 2 31 0 2201 69 0 3 chr5 3835751 3836042 -195794108 - L1PA7 LINE L1 0 6154 5865 2789 93 37 0 chr5 3836042 3836471 -195793679 + L1P LINE L1 3443 3887 -2259 25 0 0 0 chr5 3836506 3836531 -195793619 + AT_rich Low_complexity Low_complexity 1 25 0 2361 86 0 10 chr5 3836976 3837277 -195792873 - AluSc SINE Alu -11 298 1 5147 19 0 0 chr5 3837629 3838241 -195791909 + L1PA3 LINE L1 5568 6179 0 212 328 23 23 chr5 3838272 3838400 -195791750 + MIR3 SINE MIR 71 198 -10 1904 93 9 102 chr5 3838988 3839310 -195790840 + AluSc SINE Alu 1 292 -17 909 203 190 7 chr5 3839342 3839632 -195790518 - MLT1B LTR MaLR -41 349 7 276 172 0 0 chr5 3839762 3839820 -195790330 + (CA)n Simple_repeat Simple_repeat 1 58 0 2502 77 0 0 chr5 3839990 3840301 -195789849 - AluY SINE Alu 0 311 1 230 300 0 29 chr5 3840901 3840971 -195789179 - L2 LINE L2 0 3313 3246 486 210 5 38 chr5 3841133 3841319 -195788831 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 369 224 21 32 chr5 3841320 3841607 -195788543 + (CA)n Simple_repeat Simple_repeat 1 283 0 333 304 8 16 chr5 3841618 3841743 -195788407 + (CA)n Simple_repeat Simple_repeat 2 125 0 240 226 23 23 chr5 3841960 3842093 -195788057 + (CATA)n Simple_repeat Simple_repeat 2 134 0 1960 208 16 33 chr5 3843262 3843292 -195786858 + L1MB5 LINE L1 5585 5614 -560 2386 125 11 24 chr5 3843292 3843661 -195786489 - THE1B LTR MaLR 0 364 1 1960 208 16 33 chr5 3843661 3844201 -195785949 + L1MB5 LINE L1 5614 6145 -29 315 219 25 12 chr5 3844240 3844400 -195785750 + CT-rich Low_complexity Low_complexity 2 163 0 1263 199 69 0 chr5 3844409 3844655 -195785495 + AluJo SINE Alu 25 287 -25 258 116 0 0 chr5 3844675 3844718 -195785432 + L1MB5 LINE L1 6126 6168 -6 183 129 0 0 chr5 3844850 3844881 -195785269 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 393 215 23 11 chr5 3846032 3846209 -195783941 + CT-rich Low_complexity Low_complexity 1 179 0 667 184 0 16 chr5 3846225 3846597 -195783553 + CT-rich Low_complexity Low_complexity 1 365 0 389 36 18 0 chr5 3848270 3848325 -195781825 + (CA)n Simple_repeat Simple_repeat 2 57 0 683 251 73 71 chr5 3850014 3850425 -195779725 - L1MD2 LINE L1 -245 6048 5637 200 245 9 0 chr5 3850447 3850553 -195779597 + (TA)n Simple_repeat Simple_repeat 1 107 0 346 279 0 0 chr5 3850554 3850640 -195779510 + L1MC4 LINE L1 6616 6701 -1341 1208 218 97 15 chr5 3850641 3851168 -195778982 - L1MD2 LINE L1 -668 5625 5071 1746 263 96 43 chr5 3851271 3852554 -195777596 - L1MD2 LINE L1 -2880 3200 1771 288 77 0 0 chr5 3852554 3852593 -195777557 + (TG)n Simple_repeat Simple_repeat 2 40 0 1746 263 96 43 chr5 3852593 3853399 -195776751 - L1MD2 LINE L1 -4309 1771 1009 794 254 57 19 chr5 3853400 3853751 -195776399 - L1MD2 LINE L1 -5180 903 540 250 322 7 33 chr5 3853817 3853969 -195776181 + L1ME1 LINE L1 278 425 -6138 462 278 82 26 chr5 3854197 3854511 -195775639 + L1ME1 LINE L1 1368 1849 -4714 234 150 0 0 chr5 3854487 3854527 -195775623 + L1ME1 LINE L1 2940 2979 -3403 * 1969 122 45 0 chr5 3854562 3854850 -195775300 + AluSq SINE Alu 1 301 -12 312 247 0 0 chr5 3854897 3854982 -195775168 + L1ME1 LINE L1 4800 4884 -1498 8208 124 22 12 chr5 3854994 3855160 -195774990 + L1PA10 LINE L1 4033 4196 -1972 1576 112 8 48 chr5 3855160 3855409 -195774741 + AluSc SINE Alu 63 301 -8 8208 124 22 12 chr5 3855409 3856575 -195773575 + L1PA10 LINE L1 4196 5382 -786 2846 13 0 0 chr5 3856575 3856888 -195773262 + AluYb8 SINE Alu 2 314 -4 8208 124 22 12 chr5 3856888 3857672 -195772478 + L1PA10 LINE L1 5382 6157 -11 21 0 0 0 chr5 3857680 3857701 -195772449 + AT_rich Low_complexity Low_complexity 1 21 0 1207 242 34 24 chr5 3857701 3858196 -195771954 + L1ME1 LINE L1 4879 5378 -1004 * 1821 198 21 7 chr5 3858194 3858619 -195771531 + L1MC3 LINE L1 7335 7765 -20 2707 228 78 24 chr5 3858644 3859620 -195770530 + L1ME1 LINE L1 5358 6398 -4 2895 13 0 0 chr5 3859625 3859943 -195770207 - AluYb8 SINE Alu 0 318 1 219 69 0 0 chr5 3861312 3861341 -195768809 + (TA)n Simple_repeat Simple_repeat 2 30 0 312 70 0 0 chr5 3862267 3862310 -195767840 + (TG)n Simple_repeat Simple_repeat 2 44 0 1066 271 12 12 chr5 3863130 3863470 -195766680 - MER58B DNA MER1_type 0 341 2 243 0 0 0 chr5 3866190 3866217 -195763933 + (A)n Simple_repeat Simple_repeat 1 27 0 551 290 70 25 chr5 3866556 3866756 -195763394 - MIR SINE MIR -3 259 51 267 161 0 0 chr5 3869184 3869240 -195760910 + (TG)n Simple_repeat Simple_repeat 1 56 0 298 256 0 13 chr5 3870822 3870900 -195759250 + GA-rich Low_complexity Low_complexity 2 78 0 186 103 0 0 chr5 3872201 3872230 -195757920 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2394 119 31 88 chr5 3873503 3873957 -195756193 - MSTA LTR MaLR 0 428 1 282 219 0 0 chr5 3877398 3877462 -195752688 + (CA)n Simple_repeat Simple_repeat 1 64 0 1322 163 23 62 chr5 3878452 3878758 -195751392 + L1MA9 LINE L1 6013 6306 -6 1233 245 71 31 chr5 3879771 3880220 -195749930 + MLT1C LTR MaLR 1 467 0 2006 130 0 3 chr5 3881649 3881948 -195748202 - AluSc SINE Alu -11 298 1 2938 192 11 5 chr5 3882062 3882634 -195747516 + L1MA8 LINE L1 5344 5918 -373 1403 197 11 28 chr5 3882742 3883026 -195747124 - MLT2B1 LTR ERVL -240 280 2 327 49 0 0 chr5 3884456 3884497 -195745653 + (CA)n Simple_repeat Simple_repeat 2 42 0 2095 114 0 7 chr5 3885539 3885845 -195744305 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr5 3886345 3886366 -195743784 + AT_rich Low_complexity Low_complexity 1 21 0 306 227 0 13 chr5 3887711 3887786 -195742364 + MER116 DNA Mariner 1 74 -6 22 0 0 0 chr5 3889847 3889869 -195740281 + AT_rich Low_complexity Low_complexity 1 22 0 651 243 82 19 chr5 3890518 3890724 -195739426 + MER20 DNA MER1_type 1 219 0 281 273 71 71 chr5 3891077 3891260 -195738890 - MIR3 SINE MIR -25 183 1 3676 29 29 43 chr5 3891791 3892275 -195737875 + L1PA6 LINE L1 5677 6153 -1 1337 166 166 36 chr5 3894728 3895060 -195735090 + THE1C LTR MaLR 1 375 0 222 286 0 0 chr5 3896600 3896649 -195733501 + L2 LINE L2 3248 3296 -17 198 171 0 0 chr5 3898137 3898178 -195731972 + (CA)n Simple_repeat Simple_repeat 2 42 0 256 341 0 0 chr5 3898362 3898453 -195731697 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 516 303 89 62 chr5 3898723 3899106 -195731044 + L1M4 LINE L1 4157 4553 -1593 2076 129 0 0 chr5 3899106 3899409 -195730741 + AluSx SINE Alu 1 303 -9 516 303 89 62 chr5 3899409 3899441 -195730709 + L1M4 LINE L1 4553 4583 -1563 520 261 58 22 chr5 3899541 3899679 -195730471 - MIR SINE MIR -22 240 98 587 310 67 8 chr5 3902964 3903203 -195726947 - MIR SINE MIR -9 253 1 9715 179 76 56 chr5 3903576 3906069 -195724081 + L1MCa LINE L1 17 2559 -3867 1705 131 27 0 chr5 3906076 3906335 -195723815 + AluSq SINE Alu 34 299 -14 6554 172 8 26 chr5 3906342 3907496 -195722654 + L1P LINE L1 3284 4414 -1732 2071 137 0 3 chr5 3907496 3907810 -195722340 + AluSq SINE Alu 1 313 0 6554 172 8 26 chr5 3907810 3907951 -195722199 + L1P LINE L1 4414 4556 -1590 402 236 27 0 chr5 3908056 3908166 -195721984 - L1ME3 LINE L1 -318 5844 5732 1612 227 16 68 chr5 3908169 3908654 -195721496 - L1ME2 LINE L1 -306 5858 5399 731 193 47 23 chr5 3908656 3908827 -195721323 + MLT1H LTR MaLR 2 176 -373 1105 189 84 17 chr5 3908848 3909144 -195721006 - L1 LINE L1 -745 5401 5086 257 337 37 6 chr5 3909287 3909450 -195720700 - L2 LINE L2 -663 2651 2484 1821 138 97 13 chr5 3909543 3909854 -195720296 - MER1B DNA MER1_type 0 337 1 303 286 23 12 chr5 3910850 3911021 -195719129 - L1M4 LINE L1 -3136 3010 2838 * 765 179 14 0 chr5 3911020 3911160 -195718990 - L1ME2 LINE L1 -9 6155 6014 2217 108 0 0 chr5 3911396 3911701 -195718449 + AluSx SINE Alu 1 305 -7 297 281 67 76 chr5 3911706 3911930 -195718220 + MLT1J LTR MaLR 108 329 -182 2043 101 0 14 chr5 3912141 3912429 -195717721 - AluSc SINE Alu -25 284 1 1676 177 16 6 chr5 3912430 3912741 -195717409 - L1 LINE L1 -1156 4990 4677 796 213 61 17 chr5 3912840 3913070 -195717080 - L1 LINE L1 -1601 4545 4306 382 130 0 0 chr5 3913289 3913343 -195716807 + MER68 LTR ERV1 168 221 -341 1712 179 88 18 chr5 3913343 3913511 -195716639 + MSTB1 LTR MaLR 15 170 -262 186 43 0 0 chr5 3913511 3913534 -195716616 + (TTCCC)n Simple_repeat Simple_repeat 1 23 0 1712 179 88 18 chr5 3913534 3913705 -195716445 + MSTB1 LTR MaLR 170 378 -54 2160 121 0 3 chr5 3913706 3914011 -195716139 - AluSx SINE Alu -7 305 2 591 203 73 0 chr5 3914014 3914137 -195716013 + MER68 LTR ERV1 431 562 0 205 338 62 33 chr5 3914181 3914421 -195715729 + L2 LINE L2 2625 2871 -443 1795 168 3 3 chr5 3915285 3915589 -195714561 - AluJb SINE Alu -8 304 1 210 253 101 40 chr5 3915608 3915707 -195714443 - L2 LINE L2 -17 3296 3192 2343 163 46 6 chr5 3916502 3917363 -195712787 - L1M1 LINE L1 -522 5781 4885 2146 145 62 31 chr5 3917821 3918241 -195711909 + Tigger2a DNA MER2_type 2 434 0 38 68 0 0 chr5 3918844 3918917 -195711233 + GC_rich Low_complexity Low_complexity 1 73 0 256 341 0 0 chr5 3919262 3919353 -195710797 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 307 310 99 55 chr5 3919623 3920007 -195710143 + L1M4 LINE L1 4157 4557 -1589 594 112 119 0 chr5 3920008 3920151 -195709999 + AluSx SINE Alu 2 161 -151 256 149 15 30 chr5 3920417 3920484 -195709666 + GA-rich Low_complexity Low_complexity 3 68 0 232 328 0 0 chr5 3920667 3920731 -195709419 + MIR SINE MIR 45 108 -154 2933 112 18 7 chr5 3921990 3922438 -195707712 + L1PA11 LINE L1 5720 6172 -2 549 158 15 0 chr5 3922461 3922660 -195707490 + L1MA4A LINE L1 6037 6299 -4 1197 130 0 5 chr5 3923778 3923962 -195706188 + AluSg/x SINE Alu 119 301 -9 2215 90 0 10 chr5 3923965 3924265 -195705885 + AluSg1 SINE Alu 12 308 -1 192 125 0 0 chr5 3924290 3924322 -195705828 + (TA)n Simple_repeat Simple_repeat 2 33 0 212 220 0 20 chr5 3924460 3924510 -195705640 + (TA)n Simple_repeat Simple_repeat 2 50 0 1696 125 0 4 chr5 3924838 3925086 -195705064 - AluSx SINE Alu -17 295 49 1579 159 0 51 chr5 3925379 3925693 -195704457 - AluJo SINE Alu -14 298 1 219 343 71 10 chr5 3926334 3926433 -195703717 + L2 LINE L2 3162 3266 -6 2243 100 0 0 chr5 3926510 3926810 -195703340 + AluSx SINE Alu 1 300 -12 2307 89 0 0 chr5 3927372 3927676 -195702474 - AluSx SINE Alu -8 304 1 2055 178 40 40 chr5 3928575 3928970 -195701180 - LTR24C LTR ERV1 -204 431 34 1449 192 7 23 chr5 3928970 3929272 -195700878 - AluJo SINE Alu -15 297 1 2055 178 40 40 chr5 3929272 3929303 -195700847 - LTR24C LTR ERV1 -600 35 5 1023 207 81 54 chr5 3929304 3929599 -195700551 + LTR16A1 LTR ERVL 100 402 -55 183 80 0 0 chr5 3929795 3929820 -195700330 + (ATG)n Simple_repeat Simple_repeat 2 26 0 803 146 0 31 chr5 3929844 3929974 -195700176 - FLAM_C SINE Alu -6 127 2 2247 144 11 0 chr5 3930428 3930776 -195699374 + L1PA12 LINE L1 5569 5920 -248 2196 102 0 0 chr5 3930776 3931070 -195699080 - AluSx SINE Alu -18 294 1 1242 155 81 27 chr5 3931092 3931350 -195698800 - L1MA9 LINE L1 -8 6304 6033 512 146 42 62 chr5 3931351 3931385 -195698765 - Tigger3(Golem) DNA MER2_type -511 2518 2485 865 94 0 36 chr5 3931385 3931523 -195698627 - FLAM_C SINE Alu 0 133 1 512 146 42 62 chr5 3931523 3931615 -195698535 - Tigger3(Golem) DNA MER2_type -544 2485 2393 2087 106 3 7 chr5 3931615 3931917 -195698233 - AluSq SINE Alu -12 301 1 512 146 42 62 chr5 3931917 3931933 -195698217 - Tigger3(Golem) DNA MER2_type -636 2393 2378 293 237 32 21 chr5 3931941 3932034 -195698116 - Tigger3(Golem) DNA MER2_type -2879 150 57 1138 212 73 64 chr5 3932409 3932767 -195697383 - MLT1A2 LTR MaLR -13 361 1 2174 153 18 45 chr5 3932809 3932983 -195697167 + MLT1B LTR MaLR 1 178 -212 2477 102 123 5 chr5 3932983 3933365 -195696785 - MSTA LTR MaLR -1 427 1 2174 153 18 45 chr5 3933365 3933589 -195696561 + MLT1B LTR MaLR 178 388 -2 499 244 42 0 chr5 3933589 3933708 -195696442 + MER20 DNA MER1_type 84 207 -12 2300 97 0 0 chr5 3933975 3934284 -195695866 + AluSx SINE Alu 1 309 -3 2520 46 0 0 chr5 3934432 3934737 -195695413 + AluY SINE Alu 1 305 -6 1329 176 24 41 chr5 3934866 3935161 -195694989 - AluJo SINE Alu -22 290 1 287 297 169 17 chr5 3936893 3937011 -195693139 - L2 LINE L2 0 3272 3137 2005 129 0 3 chr5 3937400 3937695 -195692455 - AluSx SINE Alu -18 294 1 1446 211 91 21 chr5 3937707 3938091 -195692059 - MLT1C LTR MaLR -56 411 1 1690 154 58 141 chr5 3938091 3938538 -195691612 - MLT1C-int LTR MaLR 0 1371 962 1648 174 3 13 chr5 3938881 3939180 -195690970 + AluJo SINE Alu 1 296 -16 1755 181 85 30 chr5 3939378 3939814 -195690336 + MLT1C LTR MaLR 1 460 -7 2437 176 18 31 chr5 3940153 3940385 -195689765 - L1P4 LINE L1 -456 5710 5477 1811 183 0 6 chr5 3940385 3940697 -195689453 - AluJo SINE Alu -2 310 1 2437 176 18 31 chr5 3940697 3941366 -195688784 - L1P4 LINE L1 -689 5477 4823 232 189 0 38 chr5 3941583 3941636 -195688514 + CT-rich Low_complexity Low_complexity 4 54 0 523 186 88 0 chr5 3942729 3942842 -195687308 - HAL1 LINE L1 -754 1753 1631 1015 177 4 44 chr5 3942912 3943138 -195687012 - AluJo SINE Alu -9 303 87 1534 180 7 26 chr5 3943927 3944233 -195685917 + AluJo SINE Alu 1 300 -12 2602 83 13 44 chr5 3944397 3944616 -195685534 - THE1C LTR MaLR 0 375 172 2348 40 13 3 chr5 3944616 3944914 -195685236 + AluY SINE Alu 1 301 -10 2602 83 13 44 chr5 3944914 3945081 -195685069 - THE1C LTR MaLR -203 172 1 1084 216 194 14 chr5 3945177 3945542 -195684608 - MER74B LTR ERVL 0 622 192 941 172 0 0 chr5 3945646 3945803 -195684347 - MLT1B LTR MaLR -42 348 192 1565 185 3 20 chr5 3945986 3946169 -195683981 - AluSx SINE Alu -21 291 113 2260 107 51 23 chr5 3946169 3946523 -195683627 - THE1B LTR MaLR 0 364 1 1565 185 3 20 chr5 3946523 3946631 -195683519 - AluSx SINE Alu -199 113 5 2089 124 3 0 chr5 3946866 3947172 -195682978 - AluSx SINE Alu -5 307 1 1728 129 0 15 chr5 3947181 3947445 -195682705 - AluSx SINE Alu -11 301 42 1031 166 0 0 chr5 3948190 3948365 -195681785 + FRAM SINE Alu 1 172 -4 607 166 31 43 chr5 3948365 3948512 -195681638 - MER3 DNA MER1_type -81 128 1 2296 82 10 3 chr5 3948550 3948856 -195681294 + AluSx SINE Alu 1 308 -4 780 217 12 6 chr5 3949101 3949262 -195680888 - MER58A DNA MER1_type -32 192 31 2026 121 27 0 chr5 3950256 3950553 -195679597 + AluSx SINE Alu 1 305 -7 1412 155 64 4 chr5 3950556 3950820 -195679330 - L1MB7 LINE L1 -22 6162 5883 1388 221 105 41 chr5 3950829 3951096 -195679054 - MSTD LTR MaLR -11 385 88 1448 123 0 120 chr5 3951096 3951437 -195678713 - AluSg SINE Alu 0 300 1 1388 221 105 41 chr5 3951437 3951531 -195678619 - MSTD LTR MaLR -308 88 1 1863 168 10 54 chr5 3951531 3951750 -195678400 - L1MB7 LINE L1 -291 5893 5697 1845 161 3 0 chr5 3951750 3952061 -195678089 - AluJo SINE Alu 0 312 1 1863 168 10 54 chr5 3952061 3952229 -195677921 - L1MB7 LINE L1 -487 5697 5523 284 0 28 0 chr5 3952330 3952366 -195677784 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 258 312 74 40 chr5 3952608 3952810 -195677340 - MIR SINE MIR -7 255 47 30 45 0 0 chr5 3953848 3953892 -195676258 + AT_rich Low_complexity Low_complexity 1 44 0 3530 192 41 15 chr5 3953958 3954709 -195675441 - L1MA9 LINE L1 -38 6274 5504 266 225 14 14 chr5 3955217 3955288 -195674862 + MER103 DNA DNA 16 86 -80 522 280 108 20 chr5 3955915 3956165 -195673985 - L2 LINE L2 0 3313 3042 1586 266 132 48 chr5 3956297 3956791 -195673359 + MER69B DNA AcHobo 173 624 -1902 2138 69 49 0 chr5 3956791 3957079 -195673071 - AluY SINE Alu -9 302 1 1586 266 132 48 chr5 3957079 3957514 -195672636 + MER69B DNA AcHobo 624 1180 -46 2069 137 39 28 chr5 3957717 3958154 -195671996 + L1PA16 LINE L1 5725 6166 0 2084 139 0 0 chr5 3958260 3958570 -195671580 - AluSg SINE Alu 0 310 1 217 380 10 0 chr5 3960323 3960423 -195669727 + MIR SINE MIR 156 256 -6 2131 125 24 40 chr5 3960940 3961317 -195668833 + THE1C LTR MaLR 3 373 -2 1308 223 3 25 chr5 3964000 3964369 -195665781 + AluJb SINE Alu 1 362 0 1321 139 9 5 chr5 3964486 3964702 -195665448 + AluSq SINE Alu 97 313 0 2495 159 10 18 chr5 3964703 3965194 -195664956 + L1PA11 LINE L1 4416 4902 -1244 1852 130 3 0 chr5 3965194 3965479 -195664671 - AluSx SINE Alu 0 312 27 6162 109 3 14 chr5 3965525 3966800 -195663350 + L1PA11 LINE L1 4894 6161 -13 2148 274 85 15 chr5 3966847 3968016 -195662134 + L1MC1 LINE L1 2207 3456 -2690 341 280 21 0 chr5 3968026 3968119 -195662031 + MER2 DNA MER2_type 1 95 -250 224 185 31 0 chr5 3968123 3968188 -195661962 + (TA)n Simple_repeat Simple_repeat 1 67 0 367 186 0 0 chr5 3968278 3968337 -195661813 - MER2 DNA MER2_type -286 59 1 * 448 241 154 23 chr5 3968337 3968556 -195661594 + MER2 DNA MER2_type 97 344 -1 212 161 48 0 chr5 3969088 3969150 -195661000 + (TA)n Simple_repeat Simple_repeat 1 65 0 359 203 0 0 chr5 3969240 3969299 -195660851 - MER2 DNA MER2_type -286 59 1 * 420 241 176 23 chr5 3969299 3969514 -195660636 + MER2 DNA MER2_type 97 344 -1 4929 237 24 30 chr5 3969522 3970971 -195659179 + L1MC1 LINE L1 3480 4919 -1227 3833 190 44 17 chr5 3970977 3971934 -195658216 + L1MC1 LINE L1 5083 6063 -270 478 258 33 0 chr5 3971943 3972063 -195658087 - MER69 DNA AcHobo -1064 162 39 455 167 20 0 chr5 3975844 3976042 -195654108 - L1MA4A LINE L1 -4 6299 6037 2293 114 2 48 chr5 3976169 3976589 -195653561 - L1PA11 LINE L1 -54 6120 5720 * 3886 173 11 7 chr5 3976588 3976619 -195653531 - L1MA4A LINE L1 -265 6038 6009 1462 163 37 55 chr5 3976619 3977000 -195653150 + THE1C LTR MaLR 1 374 -1 3886 173 11 7 chr5 3977000 3978114 -195652036 - L1MA4A LINE L1 -294 6009 4885 2265 107 3 3 chr5 3981863 3982162 -195647988 + AluSq SINE Alu 1 299 -14 479 280 81 5 chr5 3982584 3982770 -195647380 + MER3 DNA MER1_type 6 205 -4 739 160 35 0 chr5 3983000 3983259 -195646891 + (TCTA)n Simple_repeat Simple_repeat 1 268 0 336 323 134 8 chr5 3983260 3983632 -195646518 + L1ME4a LINE L1 5555 5973 -148 4214 180 42 37 chr5 3985934 3987313 -195642837 + L1MA7 LINE L1 4901 6290 -1 552 306 69 26 chr5 3987529 3987918 -195642232 - MLT1I LTR MaLR -3 406 1 574 284 101 45 chr5 3987946 3988301 -195641849 + MLT1L LTR MaLR 241 615 0 883 295 157 14 chr5 3989971 3990398 -195639752 + MLT1D LTR MaLR 1 488 -17 2574 153 0 16 chr5 3991979 3992410 -195637740 + MSTA LTR MaLR 1 424 -4 666 189 0 0 chr5 3992432 3992543 -195637607 + FLAM_C SINE Alu 5 115 -18 413 19 19 0 chr5 3992562 3992616 -195637534 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 279 0 0 0 chr5 3992615 3992646 -195637504 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 234 0 0 0 chr5 3992645 3992671 -195637479 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 243 0 0 0 chr5 3992670 3992697 -195637453 + (GA)n Simple_repeat Simple_repeat 2 28 0 340 347 34 29 chr5 3993380 3993619 -195636531 + L1MC4a LINE L1 5645 5884 -1924 373 303 23 8 chr5 3994154 3994286 -195635864 + MER94 DNA DNA 1 134 0 269 276 17 60 chr5 3994350 3994466 -195635684 + L2 LINE L2 3203 3313 0 280 344 104 6 chr5 3994798 3994961 -195635189 + MER5A DNA MER1_type 7 185 -4 1278 228 155 54 chr5 3995708 3996134 -195634016 + MLT2B1 LTR ERVL 2 470 -50 258 91 91 0 chr5 3996170 3996214 -195633936 + MLT2D LTR ERVL 367 414 0 305 254 155 21 chr5 3998176 3998253 -195631897 - LTR50 LTR ERVL -2 793 728 1884 211 30 30 chr5 3998253 3998717 -195631433 + MLT1C LTR MaLR 4 467 0 305 254 155 21 chr5 3998717 3998832 -195631318 - LTR50 LTR ERVL -67 728 575 516 294 21 6 chr5 3999564 3999744 -195630406 + MLT1B LTR MaLR 189 382 -8 21 57 0 0 chr5 4001530 4001565 -195628585 + AT_rich Low_complexity Low_complexity 1 35 0 194 0 39 0 chr5 4001915 4001941 -195628209 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 210 265 0 36 chr5 4004650 4004733 -195625417 + C-rich Low_complexity Low_complexity 4 83 0 183 176 29 15 chr5 4008167 4008235 -195621915 + G-rich Low_complexity Low_complexity 3 71 0 29 28 0 0 chr5 4008406 4008442 -195621708 + GC_rich Low_complexity Low_complexity 1 36 0 36 102 0 0 chr5 4008589 4008716 -195621434 + GC_rich Low_complexity Low_complexity 1 127 0 224 149 21 0 chr5 4011597 4011644 -195618506 + CT-rich Low_complexity Low_complexity 1 48 0 25 65 0 0 chr5 4012403 4012449 -195617701 + GC_rich Low_complexity Low_complexity 1 46 0 291 113 0 0 chr5 4013888 4013941 -195616209 + (TG)n Simple_repeat Simple_repeat 1 53 0 235 291 0 29 chr5 4015387 4015490 -195614660 + (CGGGG)n Simple_repeat Simple_repeat 5 104 0 692 244 122 13 chr5 4018431 4018661 -195611489 - ORSL DNA AcHobo -17 258 4 311 0 26 0 chr5 4019513 4019552 -195610598 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr5 4020052 4020073 -195610077 + AT_rich Low_complexity Low_complexity 1 21 0 194 62 31 0 chr5 4022752 4022784 -195607366 + (TG)n Simple_repeat Simple_repeat 1 33 0 371 254 59 25 chr5 4022917 4023035 -195607115 - MER5A DNA MER1_type -35 154 33 22 35 0 0 chr5 4023748 4023777 -195606373 + AT_rich Low_complexity Low_complexity 1 29 0 2158 127 0 19 chr5 4024097 4024412 -195605738 + AluSx SINE Alu 1 309 -3 479 94 0 0 chr5 4024470 4024534 -195605616 - AluSq/x SINE Alu -184 129 66 542 151 0 0 chr5 4024635 4024721 -195605429 + AluSg/x SINE Alu 213 298 -12 1496 174 89 11 chr5 4026972 4027253 -195602897 - AluJo SINE Alu -3 309 7 416 291 135 38 chr5 4027581 4027921 -195602229 + L3 LINE CR1 1204 1576 -1 540 258 56 50 chr5 4033492 4033690 -195596460 + MER20 DNA MER1_type 17 215 -4 277 176 69 98 chr5 4034235 4034337 -195595813 + MIR SINE MIR 38 136 -72 198 103 0 0 chr5 4036512 4036541 -195593609 + (TA)n Simple_repeat Simple_repeat 1 29 0 351 326 40 0 chr5 4036654 4036878 -195593272 + L1ME4a LINE L1 5710 5942 -179 2297 125 8 40 chr5 4037702 4038078 -195592072 - THE1B LTR MaLR 0 364 1 1998 157 3 6 chr5 4038759 4039072 -195591078 - AluJb SINE Alu 0 312 1 775 311 136 44 chr5 4040088 4041147 -195589003 + L2 LINE L2 1478 2633 -681 189 0 0 0 chr5 4041250 4041271 -195588879 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 541 187 60 26 chr5 4041409 4041678 -195588472 + MLT1A1 LTR MaLR 12 353 -12 228 310 60 69 chr5 4041907 4042023 -195588127 - MIR SINE MIR -88 174 60 336 270 173 9 chr5 4042032 4042350 -195587800 - LTR16A LTR ERVL -15 435 66 288 0 0 0 chr5 4043896 4043928 -195586222 + (GA)n Simple_repeat Simple_repeat 1 32 0 204 129 81 16 chr5 4044256 4044318 -195585832 + CT-rich Low_complexity Low_complexity 2 67 0 403 209 18 0 chr5 4044432 4044542 -195585608 + CT-rich Low_complexity Low_complexity 4 115 0 304 264 19 38 chr5 4044555 4044661 -195585489 - L1M4 LINE L1 -2962 3184 3081 234 0 0 0 chr5 4044662 4044688 -195585462 + (TC)n Simple_repeat Simple_repeat 1 26 0 1487 194 33 33 chr5 4044690 4044989 -195585161 - AluJb SINE Alu -12 300 2 194 318 15 15 chr5 4045621 4045687 -195584463 - L2 LINE L2 -3 3269 3204 198 305 19 110 chr5 4045716 4045789 -195584361 + L2 LINE L2 2453 2507 -807 1977 113 0 39 chr5 4045789 4046095 -195584055 - AluSc SINE Alu 0 303 9 198 305 19 110 chr5 4046095 4046174 -195583976 + L2 LINE L2 2507 2592 -722 1711 158 15 75 chr5 4047046 4047230 -195582920 + MLT1B LTR MaLR 1 148 -242 2298 88 0 14 chr5 4047230 4047527 -195582623 + AluY SINE Alu 1 293 -18 1711 158 15 75 chr5 4047527 4047753 -195582397 + MLT1B LTR MaLR 148 386 -4 1402 211 62 9 chr5 4048180 4048516 -195581634 + MLT1A1 LTR MaLR 12 365 0 734 222 48 0 chr5 4048566 4048755 -195581395 + L1MC1 LINE L1 6129 6326 -7 576 289 10 102 chr5 4049811 4050709 -195579441 + TAR1 Satellite telomeric 1 816 -777 442 263 70 36 chr5 4051014 4051242 -195578908 - MLT1D LTR MaLR 0 467 261 1852 204 13 35 chr5 4051292 4051743 -195578407 - L1MB1 LINE L1 -39 6129 5689 433 244 19 39 chr5 4051739 4051940 -195578210 + L1M4c LINE L1 2163 2365 -3781 * 344 167 0 0 chr5 4051923 4051989 -195578161 + L1M2 LINE L1 5590 5655 -636 * 2048 152 0 10 chr5 4052019 4052321 -195577829 - AluSx SINE Alu -13 299 1 525 222 58 58 chr5 4052326 4052515 -195577635 - MLT1D LTR MaLR -313 192 4 2211 100 14 0 chr5 4052902 4053193 -195576957 - AluSc SINE Alu -14 295 1 326 262 6 139 chr5 4053491 4053663 -195576487 - MER5A DNA MER1_type -2 187 39 282 204 0 0 chr5 4110740 4110789 -195519361 - L1MA7 LINE L1 -225 6066 6018 2127 104 0 3 chr5 4110806 4111105 -195519045 - AluSx SINE Alu -13 299 2 1113 216 69 69 chr5 4111340 4111390 -195518760 + LTR16A1 LTR ERVL 56 105 -352 3160 174 37 29 chr5 4111390 4111984 -195518166 - LTR24C LTR ERV1 0 635 34 1449 192 7 23 chr5 4111984 4112286 -195517864 - AluJo SINE Alu -15 297 1 3160 174 37 29 chr5 4112286 4112317 -195517833 - LTR24C LTR ERV1 -601 34 5 1113 216 69 69 chr5 4112317 4112613 -195517537 + LTR16A1 LTR ERVL 104 402 -55 183 80 0 0 chr5 4112808 4112833 -195517317 + (ATG)n Simple_repeat Simple_repeat 2 26 0 803 146 0 31 chr5 4112857 4112987 -195517163 - FLAM_C SINE Alu -6 127 2 2269 141 11 0 chr5 4113441 4113789 -195516361 + L1PA12 LINE L1 5569 5920 -248 2205 99 0 0 chr5 4113789 4114083 -195516067 - AluSx SINE Alu -18 294 1 1521 139 51 0 chr5 4114105 4114378 -195515772 - L1MA9 LINE L1 -8 6304 6018 865 94 0 36 chr5 4114398 4114536 -195515614 - FLAM_C SINE Alu 0 133 1 556 122 28 19 chr5 4114538 4114628 -195515522 - Tigger3(Golem) DNA MER2_type -544 2485 2392 2087 106 3 7 chr5 4114628 4114930 -195515220 - AluSq SINE Alu -12 301 1 556 122 28 19 chr5 4114930 4114946 -195515204 - Tigger3(Golem) DNA MER2_type -637 2392 2378 853 208 0 7 chr5 4114956 4115105 -195515045 - Tigger3(Golem) DNA MER2_type -2881 148 1 2146 145 62 31 chr5 4115356 4115776 -195514374 + Tigger2a DNA MER2_type 2 434 0 216 97 0 0 chr5 4116470 4116501 -195513649 + (CGCGG)n Simple_repeat Simple_repeat 1 31 0 2307 89 0 0 chr5 4117187 4117491 -195512659 + AluSx SINE Alu 1 304 -8 2243 100 0 0 chr5 4118054 4118354 -195511796 - AluSx SINE Alu -12 300 1 200 369 63 9 chr5 4118431 4118542 -195511608 - L2 LINE L2 -6 3307 3191 2089 124 3 0 chr5 4118884 4119190 -195510960 - AluSx SINE Alu -5 307 1 1728 129 0 15 chr5 4119199 4119463 -195510687 - AluSx SINE Alu -11 301 42 1119 166 0 0 chr5 4120208 4120383 -195509767 + FRAM SINE Alu 1 172 -4 607 163 32 46 chr5 4120383 4120530 -195509620 - MER3 DNA MER1_type -63 146 1 2449 82 10 3 chr5 4120568 4120874 -195509276 + AluSx SINE Alu 1 308 -4 732 217 12 6 chr5 4121119 4121280 -195508870 - MER58A DNA MER1_type -32 192 31 2173 121 27 0 chr5 4122274 4122571 -195507579 + AluSx SINE Alu 1 305 -7 1336 159 64 4 chr5 4122574 4122838 -195507312 - L1MB7 LINE L1 -22 6162 5883 1299 227 106 28 chr5 4122847 4123109 -195507041 - MSTD LTR MaLR -11 385 86 2351 112 0 0 chr5 4123109 4123414 -195506736 - AluSg SINE Alu -5 305 1 1299 227 106 28 chr5 4123414 4123508 -195506642 - MSTD LTR MaLR -310 86 1 1944 171 9 50 chr5 4123508 4123727 -195506423 - L1MB7 LINE L1 -291 5893 5698 1999 161 3 0 chr5 4123727 4124038 -195506112 - AluJo SINE Alu 0 312 1 1944 171 9 50 chr5 4124038 4124240 -195505910 - L1MB7 LINE L1 -486 5698 5489 2258 92 45 3 chr5 4124481 4124773 -195505377 + AluSx SINE Alu 1 304 -8 1273 129 0 0 chr5 4124773 4124943 -195505207 + AluSg/x SINE Alu 134 303 -9 2366 90 0 10 chr5 4124946 4125246 -195504904 + AluSg1 SINE Alu 12 308 -1 192 125 0 0 chr5 4125271 4125303 -195504847 + (TA)n Simple_repeat Simple_repeat 2 33 0 212 220 0 20 chr5 4125441 4125491 -195504659 + (TA)n Simple_repeat Simple_repeat 1 49 0 1818 125 0 4 chr5 4125819 4126067 -195504083 - AluSx SINE Alu -17 295 49 1746 156 0 51 chr5 4126360 4126674 -195503476 - AluJo SINE Alu -14 298 1 495 186 88 0 chr5 4127398 4127511 -195502639 - HAL1 LINE L1 -754 1753 1631 1126 177 4 44 chr5 4127581 4127807 -195502343 - AluJo SINE Alu -9 303 87 197 331 24 113 chr5 4128198 4128322 -195501828 - MIR SINE MIR -148 114 2 1682 180 7 26 chr5 4128586 4128892 -195501258 + AluJo SINE Alu 1 300 -12 186 174 184 82 chr5 4128985 4129056 -195501094 + L2 LINE L2 3202 3287 -26 2622 83 13 44 chr5 4129056 4129275 -195500875 - THE1C LTR MaLR 0 375 172 2681 27 7 3 chr5 4129275 4129575 -195500575 + AluY SINE Alu 1 301 -10 2622 83 13 44 chr5 4129575 4129742 -195500408 - THE1C LTR MaLR -203 172 1 186 174 184 82 chr5 4129742 4129768 -195500382 + L2 LINE L2 3287 3309 -4 1012 223 195 11 chr5 4129838 4130202 -195499948 - MER74B LTR ERVL 0 622 192 907 166 0 0 chr5 4130306 4130463 -195499687 - MLT1B LTR MaLR -42 348 192 1811 175 3 20 chr5 4130646 4130829 -195499321 - AluSx SINE Alu -21 291 113 2254 107 51 25 chr5 4130829 4131184 -195498966 - THE1B LTR MaLR 0 364 1 1811 175 3 20 chr5 4131184 4131292 -195498858 - AluSx SINE Alu -199 113 5 1860 138 97 13 chr5 4131973 4132284 -195497866 + MER1B DNA MER1_type 1 337 0 404 319 129 5 chr5 4132377 4132587 -195497563 + L2 LINE L2 2484 2719 -595 1562 167 24 37 chr5 4133476 4133770 -195496380 + AluJo SINE Alu 1 290 -22 2699 45 0 0 chr5 4133895 4134204 -195495946 - AluY SINE Alu -2 309 1 2453 97 0 0 chr5 4134352 4134661 -195495489 - AluSx SINE Alu -3 309 1 473 198 47 0 chr5 4134932 4135038 -195495112 - MER20 DNA MER1_type -16 203 93 2045 153 18 45 chr5 4135047 4135271 -195494879 - MLT1B LTR MaLR -2 388 178 2504 102 123 5 chr5 4135271 4135653 -195494497 + MSTA LTR MaLR 1 427 -1 2045 153 18 45 chr5 4135653 4135827 -195494323 - MLT1B LTR MaLR -212 178 1 1148 233 76 22 chr5 4135869 4136225 -195493925 + MLT1B LTR MaLR 1 375 -15 267 30 0 0 chr5 4136237 4136270 -195493880 - MER20 DNA MER1_type -162 57 25 243 377 50 23 chr5 4136338 4136680 -195493470 - L2 LINE L2 -339 2975 2625 554 203 73 0 chr5 4136724 4136847 -195493303 - MER68 LTR ERV1 0 562 431 2316 126 0 3 chr5 4136850 4137160 -195492990 + AluSx SINE Alu 2 310 -2 1577 179 90 18 chr5 4137161 4137327 -195492823 - MSTB1 LTR MaLR -59 373 220 186 43 0 0 chr5 4137327 4137350 -195492800 + (GGGAA)n Simple_repeat Simple_repeat 1 23 0 1577 179 90 18 chr5 4137350 4137518 -195492632 - MSTB1 LTR MaLR -212 220 15 1200 171 18 0 chr5 4137518 4137735 -195492415 - MER68 LTR ERV1 -341 221 1 1561 125 79 0 chr5 4137771 4138011 -195492139 + AluJo SINE Alu 31 289 -23 279 294 160 17 chr5 4138071 4138190 -195491960 - L2 LINE L2 0 3272 3137 2088 128 0 10 chr5 4138582 4138880 -195491270 - AluSx SINE Alu -17 295 1 1291 206 88 28 chr5 4138892 4139280 -195490870 - MLT1C LTR MaLR -56 411 1 1676 154 59 131 chr5 4139280 4139722 -195490428 - MLT1C-int LTR MaLR 0 1371 962 1794 174 3 13 chr5 4140039 4140338 -195489812 + AluJo SINE Alu 1 296 -16 1068 179 111 46 chr5 4140536 4140887 -195489263 + MLT1C LTR MaLR 1 374 -93 213 39 0 0 chr5 4140988 4141014 -195489136 + (TG)n Simple_repeat Simple_repeat 1 26 0 303 280 0 0 chr5 4141089 4141232 -195488918 + (TG)n Simple_repeat Simple_repeat 2 144 0 1943 168 3 3 chr5 4142207 4142511 -195487639 - AluJb SINE Alu -8 304 1 198 240 93 27 chr5 4142646 4142721 -195487429 - L2 LINE L2 -42 3271 3192 610 294 102 55 chr5 4144163 4144507 -195485643 - L1M4 LINE L1 -3411 2735 2376 549 286 52 31 chr5 4144530 4144722 -195485428 - MIR SINE MIR 0 262 67 243 103 0 0 chr5 4144766 4144805 -195485345 + (T)n Simple_repeat Simple_repeat 1 39 0 355 220 119 8 chr5 4144875 4145193 -195484957 - L1MC3 LINE L1 -114 6048 5732 * 1228 175 0 87 chr5 4145188 4145522 -195484628 - L1MA8 LINE L1 -296 5866 5560 377 292 11 22 chr5 4146510 4146688 -195483462 - L1M4 LINE L1 -3108 3038 2863 726 179 14 0 chr5 4146711 4146851 -195483299 - L1ME2 LINE L1 -9 6155 6014 2338 108 0 3 chr5 4147088 4147394 -195482756 + AluSx SINE Alu 1 305 -7 1895 103 0 8 chr5 4147561 4147803 -195482347 - AluSc SINE Alu -69 240 1 1728 183 16 21 chr5 4147804 4148187 -195481963 - L1MA8 LINE L1 -1156 4990 4610 915 222 36 0 chr5 4148177 4148402 -195481748 - L1M4 LINE L1 -1598 4548 4316 * 2258 110 3 0 chr5 4248785 4249093 -195381057 + AluSc SINE Alu 1 309 0 25 0 0 0 chr5 4249267 4249292 -195380858 + AT_rich Low_complexity Low_complexity 1 25 0 946 53 26 7 chr5 4249376 4249527 -195380623 + (TAGA)n Simple_repeat Simple_repeat 2 155 0 227 323 23 0 chr5 4249648 4249778 -195380372 - L2 LINE L2 -1635 1679 1547 208 143 0 0 chr5 4250055 4250090 -195380060 + (TTA)n Simple_repeat Simple_repeat 3 37 0 955 256 32 18 chr5 4250430 4250715 -195379435 - L1MD1 LINE L1 -170 6072 5784 1781 243 92 66 chr5 4251416 4252487 -195377663 + L1ME2 LINE L1 5045 6156 -8 25 31 0 0 chr5 4252573 4252605 -195377545 + AT_rich Low_complexity Low_complexity 1 32 0 277 311 86 8 chr5 4252808 4253065 -195377085 + L1ME4a LINE L1 2279 2555 -3591 295 173 123 48 chr5 4253210 4253408 -195376742 + MER5C DNA MER1_type 47 323 -1 232 295 36 7 chr5 4253409 4253548 -195376602 + L1ME4a LINE L1 2689 2831 -3315 543 271 74 17 chr5 4253836 4254217 -195375933 + L1ME4a LINE L1 5209 5607 -555 6477 67 26 1 chr5 4254334 4255999 -195374151 + L1PA7 LINE L1 4455 6154 0 2027 127 0 7 chr5 4256172 4256464 -195373686 + AluSx SINE Alu 1 290 -22 918 121 0 73 chr5 4258688 4258853 -195371297 + Charlie3 DNA MER1_type 2550 2702 -8 311 279 16 16 chr5 4258880 4259002 -195371148 + L1ME4a LINE L1 5762 5883 -238 372 309 90 18 chr5 4260414 4260637 -195369513 - MLT1J2 LTR MaLR -158 292 54 1142 224 86 45 chr5 4261155 4261315 -195368835 + L1MC1 LINE L1 4341 4493 -1653 2045 93 0 0 chr5 4261315 4261603 -195368547 + AluSq SINE Alu 35 322 0 1142 224 86 45 chr5 4261603 4261906 -195368244 + L1MC1 LINE L1 4493 4824 -1322 4628 153 31 7 chr5 4261934 4262802 -195367348 + L1MC1 LINE L1 5356 6244 -89 2306 128 0 0 chr5 4263488 4263800 -195366350 - AluSx SINE Alu 0 312 1 297 311 37 6 chr5 4263938 4264102 -195366048 + LTR16A LTR ERVL 205 373 -77 2343 60 0 3 chr5 4264236 4264557 -195365593 - AluY SINE Alu 0 320 1 286 229 42 42 chr5 4264754 4264898 -195365252 - L1MCc LINE L1 -6256 167 24 1272 132 0 0 chr5 4266320 4266502 -195363648 + AluSg/x SINE Alu 131 312 0 21 0 0 0 chr5 4267014 4267035 -195363115 + AT_rich Low_complexity Low_complexity 1 21 0 748 207 17 17 chr5 4267267 4267441 -195362709 + MLT1A2 LTR MaLR 1 174 -200 235 208 0 0 chr5 4267457 4267510 -195362640 + CT-rich Low_complexity Low_complexity 1 53 0 1826 234 42 22 chr5 4267636 4268088 -195362062 + MLT1A2-int LTR MaLR 1271 1731 -4 1246 243 38 30 chr5 4268092 4268463 -195361687 + MLT1A2 LTR MaLR 1 374 0 328 273 79 36 chr5 4270109 4270248 -195359902 - MIR SINE MIR -1 261 117 359 179 64 0 chr5 4270560 4270638 -195359512 - L1MC1 LINE L1 -8 6325 6243 1507 115 42 0 chr5 4270640 4270857 -195359293 + THE1B LTR MaLR 1 226 -138 2071 108 0 10 chr5 4271406 4271702 -195358448 - AluSc SINE Alu -16 293 1 2136 66 0 0 chr5 4272816 4273088 -195357062 - AluY SINE Alu -6 305 34 21 57 0 0 chr5 4273210 4273245 -195356905 + AT_rich Low_complexity Low_complexity 1 35 0 1897 136 0 0 chr5 4274979 4275252 -195354898 + AluSg SINE Alu 1 273 -37 246 309 59 26 chr5 4275306 4275458 -195354692 - LTR67 LTR ERVL -255 302 146 * 247 182 121 30 chr5 4275416 4275482 -195354668 - MLT1K LTR MaLR -325 263 192 234 91 0 0 chr5 4276321 4276354 -195353796 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 499 339 47 4 chr5 4276495 4276731 -195353419 - L1M4 LINE L1 -1273 4873 4628 289 291 11 60 chr5 4276779 4276992 -195353158 - L1MDb LINE L1 -5008 1401 1202 1350 218 92 12 chr5 4276992 4277327 -195352823 + MLT1A1 LTR MaLR 4 365 0 289 291 11 60 chr5 4277327 4277381 -195352769 - L1MDb LINE L1 -5207 1202 1147 24471 128 16 77 chr5 4278358 4281402 -195348748 + L1P LINE L1 12 2676 -3470 2151 113 0 0 chr5 4281402 4281703 -195348447 + AluY SINE Alu 1 301 -10 24471 128 16 77 chr5 4281703 4283324 -195346826 + L1P LINE L1 2676 4394 -1752 206 45 15 159 chr5 4283493 4283694 -195346456 + (CACAT)n Simple_repeat Simple_repeat 5 176 0 270 29 0 162 chr5 4283712 4283916 -195346234 + (CACAT)n Simple_repeat Simple_repeat 1 171 0 * 376 364 0 0 chr5 4283782 4284080 -195346070 + C-rich Low_complexity Low_complexity 1 298 0 3726 47 0 4 chr5 4285942 4286392 -195343758 - LTR7 LTR ERV1 -2 448 1 1525 171 25 0 chr5 4286721 4287002 -195343148 + AluJb SINE Alu 1 288 -24 269 176 29 0 chr5 4287002 4287070 -195343080 + (TA)n Simple_repeat Simple_repeat 1 70 0 309 295 76 63 chr5 4287075 4287312 -195342838 - L1MCa LINE L1 -4212 2214 1975 646 272 55 10 chr5 4289321 4289523 -195340627 + MIR SINE MIR 51 261 -1 1495 82 5 0 chr5 4290097 4290303 -195339847 - AluY SINE Alu -94 217 11 22 56 0 0 chr5 4290437 4290473 -195339677 + AT_rich Low_complexity Low_complexity 1 36 0 2194 89 3 0 chr5 4290939 4291230 -195338920 + AluSp SINE Alu 1 292 -21 23 0 0 0 chr5 4291246 4291269 -195338881 + AT_rich Low_complexity Low_complexity 1 23 0 244 373 73 0 chr5 4291675 4291830 -195338320 + MIR SINE MIR 18 183 -58 28 0 0 0 chr5 4293349 4293377 -195336773 + AT_rich Low_complexity Low_complexity 1 28 0 264 314 34 3 chr5 4294120 4294222 -195335928 + MIR SINE MIR 31 134 -74 1996 120 6 28 chr5 4294495 4294812 -195335338 + AluSx SINE Alu 1 310 -2 359 288 155 30 chr5 4299208 4299614 -195330536 + L1ME4a LINE L1 5426 5882 -239 222 205 0 0 chr5 4300870 4300909 -195329241 + A-rich Low_complexity Low_complexity 5 43 0 601 203 9 6 chr5 4301042 4301389 -195328761 + (TCCA)n Simple_repeat Simple_repeat 1 347 0 388 315 136 69 chr5 4301420 4302348 -195327802 - L2 LINE L2 -4 3309 2310 354 234 0 0 chr5 4303014 4303121 -195327029 + (CCCA)n Simple_repeat Simple_repeat 3 109 0 184 297 109 62 chr5 4303359 4303436 -195326714 - L2 LINE L2 -58 3255 3183 2393 118 28 3 chr5 4303436 4303791 -195326359 + THE1B LTR MaLR 1 364 0 184 297 109 62 chr5 4303791 4303969 -195326181 - L2 LINE L2 -130 3183 2988 306 254 127 0 chr5 4305857 4305999 -195324151 - MLT1K LTR MaLR -66 522 363 1849 124 77 41 chr5 4306975 4307337 -195322813 + THE1C LTR MaLR 1 375 0 445 265 153 58 chr5 4308029 4308292 -195321858 + L2 LINE L2 2814 3131 -182 374 68 0 17 chr5 4308292 4308351 -195321799 + (TA)n Simple_repeat Simple_repeat 2 59 0 445 265 153 58 chr5 4308351 4308498 -195321652 + L2 LINE L2 3131 3263 -50 470 316 57 19 chr5 4309694 4309906 -195320244 - MIR SINE MIR -3 259 40 291 324 46 46 chr5 4310013 4310186 -195319964 - MIR SINE MIR -42 220 48 226 143 0 0 chr5 4311589 4311624 -195318526 - MER63 DNA MER1_type -333 728 694 183 184 0 0 chr5 4313406 4313444 -195316706 + CT-rich Low_complexity Low_complexity 1 38 0 478 198 27 0 chr5 4313492 4313603 -195316547 - L1MA7 LINE L1 -2 6289 6176 3797 234 19 42 chr5 4313704 4315232 -195314918 - L1P3 LINE L1 -4735 1140 4 1585 181 14 0 chr5 4315277 4315559 -195314591 - AluSx SINE Alu -17 295 10 207 277 84 12 chr5 4316447 4316530 -195313620 - MER91A DNA MER1_type -83 113 25 192 77 0 0 chr5 4317576 4317602 -195312548 + (CA)n Simple_repeat Simple_repeat 2 27 0 516 221 0 0 chr5 4317613 4317962 -195312188 + (CA)n Simple_repeat Simple_repeat 1 349 0 462 243 0 0 chr5 4317973 4318150 -195312000 + (CA)n Simple_repeat Simple_repeat 1 177 0 393 247 0 0 chr5 4318175 4318341 -195311809 + (CA)n Simple_repeat Simple_repeat 2 167 0 195 42 0 0 chr5 4318970 4318994 -195311156 + (CAAAG)n Simple_repeat Simple_repeat 1 24 0 195 333 23 11 chr5 4320814 4320901 -195309249 + L3b LINE CR1 1111 1198 -385 31 0 0 0 chr5 4320905 4320936 -195309214 + AT_rich Low_complexity Low_complexity 1 31 0 230 339 46 15 chr5 4321703 4321833 -195308317 - L2 LINE L2 -15 3298 3165 543 233 72 22 chr5 4321997 4322177 -195307973 - L1MC4 LINE L1 -1053 6989 6801 190 342 54 27 chr5 4322783 4322894 -195307256 + MIR3 SINE MIR 42 155 -53 2649 17 3 0 chr5 4322988 4323282 -195306868 + AluY SINE Alu 1 295 -16 236 337 0 33 chr5 4324670 4324762 -195305388 - L3 LINE CR1 -161 1416 1328 230 318 16 0 chr5 4324889 4324952 -195305198 + MIR SINE MIR 85 148 -114 195 171 0 43 chr5 4325589 4325659 -195304491 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 306 156 78 0 chr5 4325667 4325731 -195304419 - L1MCa LINE L1 -4362 2064 1996 1349 172 19 130 chr5 4325731 4326092 -195304058 - MER7A DNA MER2_type -16 330 12 506 257 32 30 chr5 4326198 4326211 -195303939 - L1MA7 LINE L1 -158 6133 6122 2344 85 7 0 chr5 4326211 4326504 -195303646 - AluY SINE Alu -16 295 1 506 257 32 30 chr5 4326504 4326660 -195303490 - L1MA7 LINE L1 -169 6122 5972 258 32 0 0 chr5 4326666 4326697 -195303453 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 2139 116 14 0 chr5 4327102 4327394 -195302756 + AluSx SINE Alu 1 296 -16 374 282 63 14 chr5 4328031 4328173 -195301977 + MIR SINE MIR 93 241 -21 1335 177 83 0 chr5 4329069 4329334 -195300816 + MER2 DNA MER2_type 1 287 -58 2062 87 4 0 chr5 4329375 4329640 -195300510 - L1PB1 LINE L1 0 6151 5886 252 306 28 0 chr5 4329645 4329717 -195300433 + MER2 DNA MER2_type 272 345 0 327 338 46 27 chr5 4329746 4329965 -195300185 + MIR SINE MIR 29 251 -11 312 91 0 0 chr5 4330009 4330053 -195300097 + (TC)n Simple_repeat Simple_repeat 1 44 0 1739 152 28 14 chr5 4332294 4332577 -195297573 - AluJb SINE Alu -25 287 1 523 342 126 23 chr5 4332598 4333041 -195297109 - L1ME3A LINE L1 -341 5829 5330 2688 96 36 14 chr5 4333041 4333397 -195296753 - THE1B LTR MaLR 0 364 1 523 342 126 23 chr5 4333397 4333439 -195296711 - L1ME3A LINE L1 -840 5330 5294 920 194 53 119 chr5 4333750 4334070 -195296080 - MLT1A2 LTR MaLR -50 324 26 754 212 232 10 chr5 4334086 4334388 -195295762 + L1ME3 LINE L1 5780 6148 -14 826 200 0 50 chr5 4334390 4334570 -195295580 - AluJb SINE Alu -6 306 136 23 0 0 0 chr5 4334674 4334697 -195295453 + AT_rich Low_complexity Low_complexity 1 23 0 1086 159 0 37 chr5 4334697 4334886 -195295264 - L1PA16 LINE L1 -9 6157 5976 522 287 94 40 chr5 4335221 4335757 -195294393 - L1MDa LINE L1 -3550 2579 2067 297 272 57 57 chr5 4336060 4336469 -195293681 - L1MDa LINE L1 -920 1609 1415 440 287 52 55 chr5 4336544 4336906 -195293244 - L1MDa LINE L1 -4864 1255 895 232 328 26 70 chr5 4337007 4337278 -195292872 - L1MDa LINE L1 -5301 818 560 1677 266 26 6 chr5 4337291 4337757 -195292393 - L1MD3 LINE L1 -10 7985 7511 368 339 23 0 chr5 4337768 4337898 -195292252 - L1MDa LINE L1 -5562 557 425 227 262 0 0 chr5 4338182 4338243 -195291907 - LTR66 LTR ERVL -152 458 398 27 29 0 0 chr5 4338247 4338281 -195291869 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr5 4338346 4338370 -195291780 + AT_rich Low_complexity Low_complexity 1 24 0 451 272 111 14 chr5 4338375 4338592 -195291558 + L1ME4a LINE L1 5636 5873 -248 477 244 134 0 chr5 4342136 4342308 -195287842 + MLT2F LTR ERVL 461 655 -8 524 236 6 0 chr5 4342339 4342517 -195287633 + (TG)n Simple_repeat Simple_repeat 1 179 0 1833 108 8 8 chr5 4344189 4344449 -195285701 - AluSg SINE Alu -19 291 32 2319 225 49 24 chr5 4346637 4347251 -195282899 + L1MB3 LINE L1 5539 6167 -16 203 146 24 0 chr5 4347292 4347333 -195282817 + CT-rich Low_complexity Low_complexity 1 42 0 681 171 28 6 chr5 4347361 4347537 -195282613 + CT-rich Low_complexity Low_complexity 1 180 0 255 195 0 0 chr5 4347537 4347578 -195282572 + polypyrimidine Low_complexity Low_complexity 1 41 0 749 165 24 10 chr5 4347578 4347846 -195282304 + CT-rich Low_complexity Low_complexity 1 271 0 896 140 11 11 chr5 4347874 4348053 -195282097 + CT-rich Low_complexity Low_complexity 2 180 0 419 132 0 85 chr5 4348341 4348447 -195281703 - L1MA7 LINE L1 -1 6290 6194 1217 273 52 11 chr5 4348547 4349009 -195281141 - L1M4 LINE L1 -1160 4986 4506 485 303 50 54 chr5 4349335 4349632 -195280518 - HAL1 LINE L1 -842 1665 1370 564 309 12 0 chr5 4349947 4350112 -195280038 + MIR SINE MIR 32 198 -64 237 118 0 0 chr5 4350621 4350655 -195279495 + (TC)n Simple_repeat Simple_repeat 1 34 0 342 242 13 19 chr5 4350656 4350813 -195279337 + CT-rich Low_complexity Low_complexity 4 159 0 2043 129 3 0 chr5 4352105 4352400 -195277750 + AluSx SINE Alu 1 296 -16 319 132 55 0 chr5 4352426 4352517 -195277633 + (TA)n Simple_repeat Simple_repeat 1 96 0 21 0 0 0 chr5 4352713 4352734 -195277416 + AT_rich Low_complexity Low_complexity 1 21 0 479 268 157 25 chr5 4354952 4355150 -195275000 + MIR SINE MIR 10 233 -29 1628 213 7 34 chr5 4355334 4355775 -195274375 + MLT2B3 LTR ERVL 5 481 -34 700 152 30 0 chr5 4355796 4355961 -195274189 + (TCTA)n Simple_repeat Simple_repeat 4 173 0 681 184 11 17 chr5 4355984 4356163 -195273987 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 197 65 32 0 chr5 4356186 4356217 -195273933 + (TTTC)n Simple_repeat Simple_repeat 1 32 0 583 196 13 0 chr5 4356236 4356389 -195273761 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 325 117 17 33 chr5 4356390 4356450 -195273700 + MLT2B3 LTR ERVL 462 554 0 207 69 0 0 chr5 4356970 4356999 -195273151 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr5 4357568 4357590 -195272560 + AT_rich Low_complexity Low_complexity 1 22 0 884 241 50 70 chr5 4357829 4358334 -195271816 + MER34 LTR ERV1 6 585 0 379 236 36 9 chr5 4359151 4359261 -195270889 + MARNA DNA Mariner 266 378 -208 2271 100 0 13 chr5 4360031 4360340 -195269810 - AluSx SINE Alu -7 305 1 622 197 61 14 chr5 4361508 4361655 -195268495 + MLT1B LTR MaLR 8 161 -229 2743 89 22 32 chr5 4361662 4362067 -195268083 - L1PA13 LINE L1 0 6163 5763 1137 194 0 0 chr5 4362067 4362289 -195267861 + L1P LINE L1 5174 5395 -751 895 204 33 50 chr5 4362289 4362529 -195267621 + MLT1B LTR MaLR 143 378 -12 9391 164 21 5 chr5 4362726 4362746 -195267404 - L1P LINE L1 -2743 3403 3385 7353 131 10 51 chr5 4362746 4363444 -195266706 - L1PA10 LINE L1 0 6168 5443 613 100 0 0 chr5 4363444 4363524 -195266626 - MADE1 DNA Mariner 0 80 1 7353 131 10 51 chr5 4363524 4364897 -195265253 - L1PA10 LINE L1 -725 5443 4154 9391 164 21 5 chr5 4364897 4366607 -195263543 - L1P LINE L1 -2761 3385 1645 2131 149 6 6 chr5 4366614 4366943 -195263207 - THE1B LTR MaLR 0 364 36 542 15 15 0 chr5 4369254 4369321 -195260829 + (TTTTC)n Simple_repeat Simple_repeat 3 70 0 852 153 0 22 chr5 4369322 4369505 -195260645 + CT-rich Low_complexity Low_complexity 1 179 0 2245 147 3 5 chr5 4375668 4376035 -195254115 - L1PB1 LINE L1 -3 6148 5783 378 231 0 0 chr5 4376035 4376126 -195254024 + (TG)n Simple_repeat Simple_repeat 1 91 0 1360 116 1 20 chr5 4376126 4376363 -195253787 - L1PB1 LINE L1 -359 5792 5569 613 265 0 0 chr5 4376857 4377008 -195253142 - L1MB7 LINE L1 -16 6168 6018 1657 185 0 3 chr5 4379498 4379796 -195250354 - AluJo SINE Alu -1 311 15 1848 138 10 3 chr5 4380909 4381213 -195248937 + AluSx SINE Alu 1 306 -6 268 306 70 70 chr5 4382185 4382384 -195247766 + MIR SINE MIR 13 211 -51 358 303 6 43 chr5 4382854 4383016 -195247134 + L1PA10 LINE L1 5858 6013 -155 * 1668 191 57 37 chr5 4382888 4383290 -195246860 + L1MA4A LINE L1 5888 6297 -6 297 312 6 6 chr5 4383899 4384069 -195246081 + (TA)n Simple_repeat Simple_repeat 2 171 0 267 341 16 0 chr5 4384195 4384321 -195245829 + C-rich Low_complexity Low_complexity 6 133 0 233 245 0 7 chr5 4384324 4384475 -195245675 + (CA)n Simple_repeat Simple_repeat 1 150 0 216 111 0 0 chr5 4384575 4384611 -195245539 + (CA)n Simple_repeat Simple_repeat 1 36 0 2135 118 0 0 chr5 4387280 4387586 -195242564 + AluSq SINE Alu 2 307 -6 1918 228 150 110 chr5 4390371 4390927 -195239223 - L1MC3 LINE L1 -9 7776 7244 265 245 39 59 chr5 4390927 4391029 -195239121 - MLT1F1 LTR MaLR -434 133 34 1918 228 150 110 chr5 4391029 4391423 -195238727 - L1MC3 LINE L1 -541 7244 6683 204 118 29 0 chr5 4392150 4392184 -195237966 + GA-rich Low_complexity Low_complexity 2 36 0 544 249 169 80 chr5 4392274 4392553 -195237597 + MLT1H1 LTR MaLR 14 267 -288 580 288 25 0 chr5 4392553 4392751 -195237399 + MER105 DNA DNA 2 204 0 544 249 169 80 chr5 4392751 4392957 -195237193 + MLT1H1 LTR MaLR 267 542 -13 322 265 41 0 chr5 4394070 4394168 -195235982 + MIR SINE MIR 151 252 -10 1715 173 52 30 chr5 4394959 4395324 -195234826 + THE1C LTR MaLR 1 373 -2 9491 141 16 35 chr5 4395328 4396937 -195233213 + THE1C-int LTR MaLR 3 1580 0 1492 170 38 98 chr5 4396937 4397336 -195232814 + THE1C LTR MaLR 1 375 0 493 255 59 20 chr5 4399170 4399323 -195230827 + MER70B LTR ERVL 1 159 -419 * 2116 245 21 4 chr5 4399322 4399792 -195230358 + MER70B LTR ERVL 90 567 -11 331 212 29 7 chr5 4400075 4400212 -195229938 + GA-rich Low_complexity Low_complexity 2 141 0 468 175 0 0 chr5 4400313 4400410 -195229740 + GA-rich Low_complexity Low_complexity 2 98 0 267 299 11 0 chr5 4400988 4401075 -195229075 + (CA)n Simple_repeat Simple_repeat 1 88 0 2468 36 7 10 chr5 4403686 4403988 -195226162 - AluY SINE Alu -10 301 1 1367 203 6 37 chr5 4404043 4404364 -195225786 - AluJb SINE Alu -1 311 1 2045 101 0 4 chr5 4404554 4404831 -195225319 - AluSq SINE Alu -27 286 11 1866 120 0 33 chr5 4404978 4405277 -195224873 - AluSx SINE Alu -23 289 1 26 0 0 0 chr5 4405541 4405567 -195224583 + AT_rich Low_complexity Low_complexity 1 26 0 1702 173 0 13 chr5 4406052 4406358 -195223792 + AluSx SINE Alu 1 302 -10 1643 110 0 62 chr5 4406667 4406940 -195223210 + AluSg SINE Alu 49 304 -6 345 310 192 15 chr5 4407147 4407418 -195222732 + L1M4 LINE L1 5074 5392 -754 225 282 13 13 chr5 4458449 4458546 -195171604 + GA-rich Low_complexity Low_complexity 2 149 0 558 218 3 9 chr5 4460244 4460582 -195169568 + (TA)n Simple_repeat Simple_repeat 1 335 0 340 270 22 0 chr5 4460582 4460671 -195169479 - L1MC4 LINE L1 -1337 6705 6615 312 277 0 43 chr5 4460648 4460742 -195169408 + L1MC4 LINE L1 6614 6703 -1339 * 301 209 15 0 chr5 4460682 4460749 -195169401 - L1M4b LINE L1 -4363 2594 2527 * 1046 300 159 40 chr5 4460776 4462257 -195167893 - L2 LINE L2 -4 3309 1610 290 83 0 62 chr5 4463746 4463794 -195166356 + MLT2A2 LTR ERVL 399 443 -10 3646 225 38 25 chr5 4463816 4464762 -195165388 - L1MC3 LINE L1 -1160 6625 5668 675 218 86 47 chr5 4464755 4464974 -195165176 - L1M4b LINE L1 -4792 2165 1933 * 450 0 0 0 chr5 4464974 4465024 -195165126 + (TG)n Simple_repeat Simple_repeat 1 50 0 675 218 86 47 chr5 4465024 4465061 -195165089 - L1M4b LINE L1 -5024 1933 1899 1755 276 67 88 chr5 4465115 4466076 -195164074 - L1MCa LINE L1 -5103 942 3 421 223 78 105 chr5 4466091 4466188 -195163962 - L1M4b LINE L1 -5159 1788 1690 1886 147 29 0 chr5 4466188 4466467 -195163683 + AluSx SINE Alu 3 289 -23 421 223 78 105 chr5 4466467 4466701 -195163449 - L1M4b LINE L1 -5257 1690 1339 2417 146 5 16 chr5 4466938 4467315 -195162835 - THE1C LTR MaLR -2 373 1 2609 222 88 5 chr5 4467408 4468069 -195162081 + L1MD1 LINE L1 5518 6233 -9 21 71 0 0 chr5 4468544 4468586 -195161564 + AT_rich Low_complexity Low_complexity 1 42 0 627 218 156 0 chr5 4469634 4469813 -195160337 + MER20 DNA MER1_type 1 207 -12 1604 114 76 76 chr5 4469852 4470141 -195160009 - AluSx SINE Alu -23 289 1 1343 215 0 19 chr5 4470189 4470454 -195159696 + AluJo SINE Alu 1 260 -52 277 62 42 0 chr5 4473669 4473717 -195156433 + (TC)n Simple_repeat Simple_repeat 2 51 0 21 57 0 0 chr5 4476030 4476065 -195154085 + AT_rich Low_complexity Low_complexity 1 35 0 251 267 124 0 chr5 4476173 4476278 -195153872 + MER45A DNA AcHobo 61 178 0 597 249 0 0 chr5 4476933 4477110 -195153040 + (TG)n Simple_repeat Simple_repeat 2 178 0 260 184 0 0 chr5 4477135 4477184 -195152966 + MER4-int LTR ERV1 1114 1162 -5436 23 54 0 0 chr5 4478503 4478540 -195151610 + AT_rich Low_complexity Low_complexity 1 37 0 497 128 26 0 chr5 4478568 4478646 -195151504 + MER116 DNA Mariner 1 80 0 1606 164 7 31 chr5 4478728 4479044 -195151106 - AluJo SINE Alu 0 312 4 650 90 0 0 chr5 4479420 4479509 -195150641 - L1PA8 LINE L1 0 6172 6084 201 298 21 32 chr5 4479576 4479670 -195150480 - MIR SINE MIR -99 163 71 1803 196 17 6 chr5 4479945 4480298 -195149852 - MLT1A1 LTR MaLR -8 357 1 3078 118 18 11 chr5 4480758 4481199 -195148951 + MLT2A1 LTR ERVL 1 444 0 43342 84 7 9 chr5 4481199 4486866 -195143284 + HERVL-A1-A1 LTR ERVL 1 5654 0 3211 100 20 11 chr5 4486866 4487306 -195142844 + MLT2A1 LTR ERVL 1 444 0 269 82 20 0 chr5 4487348 4487397 -195142753 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 318 190 20 30 chr5 4488357 4488457 -195141693 + T-rich Low_complexity Low_complexity 6 104 0 360 0 0 0 chr5 4489400 4489440 -195140710 + (CA)n Simple_repeat Simple_repeat 2 41 0 2335 97 0 0 chr5 4489440 4489738 -195140412 - AluSp SINE Alu -12 301 4 1897 135 7 0 chr5 4490241 4490522 -195139628 + AluSx SINE Alu 23 305 -7 189 0 0 0 chr5 4490573 4490594 -195139556 + (T)n Simple_repeat Simple_repeat 1 21 0 534 296 87 27 chr5 4490896 4491230 -195138920 + MLT1H LTR MaLR 1 354 -195 22 0 0 0 chr5 4491413 4491435 -195138715 + AT_rich Low_complexity Low_complexity 1 22 0 2248 110 0 10 chr5 4491556 4491865 -195138285 - AluSx SINE Alu -6 306 1 191 408 14 7 chr5 4492255 4492402 -195137748 - MIR3 SINE MIR -41 167 20 339 25 0 0 chr5 4492521 4492561 -195137589 + (CA)n Simple_repeat Simple_repeat 2 41 0 1681 189 85 33 chr5 4492562 4493086 -195137064 + MLT2A2 LTR ERVL 2 549 -5 459 0 0 0 chr5 4493086 4493137 -195137013 + (CA)n Simple_repeat Simple_repeat 2 52 0 186 143 0 0 chr5 4493137 4493172 -195136978 + (GA)n Simple_repeat Simple_repeat 1 35 0 298 196 22 0 chr5 4493326 4493418 -195136732 + (TA)n Simple_repeat Simple_repeat 2 95 0 24 0 0 0 chr5 4493465 4493489 -195136661 + AT_rich Low_complexity Low_complexity 1 24 0 2220 113 0 7 chr5 4493499 4493799 -195136351 + AluSx SINE Alu 1 298 -14 9442 193 38 13 chr5 4493814 4499151 -195130999 + L1MC1 LINE L1 23 5659 -954 1494 116 5 14 chr5 4499151 4499367 -195130783 + AluSq SINE Alu 94 307 -6 9442 193 38 13 chr5 4499367 4500341 -195129809 + L1MC1 LINE L1 5659 6607 -6 6029 111 25 20 chr5 4505853 4506841 -195123309 + L1PA13 LINE L1 5168 6161 -2 1789 182 116 6 chr5 4507865 4508228 -195121922 - MER57A LTR ERV1 0 403 1 863 203 7 7 chr5 4509214 4509367 -195120783 + AluJb SINE Alu 137 289 -23 7307 161 74 5 chr5 4513129 4515597 -195114553 - L1MA3 LINE L1 0 6305 3657 180 0 0 0 chr5 4515997 4516017 -195114133 + (T)n Simple_repeat Simple_repeat 1 20 0 237 167 0 0 chr5 4517572 4517626 -195112524 + CT-rich Low_complexity Low_complexity 2 55 0 225 211 0 0 chr5 4517869 4517921 -195112229 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 318 106 0 0 chr5 4517933 4517980 -195112170 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 0 0 0 chr5 4518513 4518535 -195111615 + AT_rich Low_complexity Low_complexity 1 22 0 406 260 16 16 chr5 4519486 4519609 -195110541 + L2 LINE L2 3187 3309 -4 305 342 69 32 chr5 4520140 4520536 -195109614 + L3 LINE CR1 363 832 -745 325 378 67 11 chr5 4520830 4521097 -195109053 + L3 LINE CR1 1250 1531 -46 972 217 53 35 chr5 4521099 4521417 -195108733 + MER33 DNA MER1_type 1 324 0 302 306 20 0 chr5 4521434 4521532 -195108618 + MER5A DNA MER1_type 10 109 -80 462 110 82 0 chr5 4521908 4521981 -195108169 + MADE1 DNA Mariner 1 79 -1 306 115 0 0 chr5 4522475 4522527 -195107623 + (TG)n Simple_repeat Simple_repeat 1 52 0 1375 236 120 23 chr5 4523086 4523485 -195106665 - MER31B LTR ERV1 -28 438 1 2494 31 7 0 chr5 4523876 4524170 -195105980 - L1PA4 LINE L1 0 6155 5860 1204 179 25 122 chr5 4524427 4524780 -195105370 + MLT1A1 LTR MaLR 1 319 -46 372 291 50 50 chr5 4526922 4527142 -195103008 + MIR SINE MIR 13 232 -30 745 281 86 69 chr5 4530471 4531329 -195098821 + L1MEd LINE L1 427 1334 -4871 922 202 33 29 chr5 4532374 4532690 -195097460 + MSTD LTR MaLR 4 396 0 1323 0 0 0 chr5 4533555 4533699 -195096451 - L1PA2 LINE L1 -3 6152 6009 12879 28 1 0 chr5 4533700 4535217 -195094933 + L1P LINE L1 2926 4444 -1702 2220 200 22 16 chr5 4536322 4536811 -195093339 - L1MC3 LINE L1 -1 7784 7293 2315 244 47 31 chr5 4536834 4537360 -195092790 - L1MCa LINE L1 -4573 1991 1475 342 0 0 0 chr5 4537360 4537398 -195092752 + (TG)n Simple_repeat Simple_repeat 2 39 0 2315 244 47 31 chr5 4537398 4538091 -195092059 - L1MCa LINE L1 -5089 1475 37 22 35 0 0 chr5 4538226 4538255 -195091895 + AT_rich Low_complexity Low_complexity 1 29 0 318 275 43 72 chr5 4538606 4538744 -195091406 + MLT1H LTR MaLR 209 342 -207 423 243 0 10 chr5 4538959 4539062 -195091088 + FLAM_A SINE Alu 32 133 -9 1627 65 0 0 chr5 4539655 4539855 -195090295 + L1PA8 LINE L1 5967 6166 -6 262 336 30 8 chr5 4540658 4540792 -195089358 - MIR SINE MIR -86 176 40 1908 161 146 3 chr5 4541465 4541843 -195088307 - MSTB1 LTR MaLR 0 432 1 1792 35 4 18 chr5 4542344 4542571 -195087579 - L1PA4 LINE L1 0 6155 5932 1505 232 30 14 chr5 4542775 4543142 -195087008 + MLT1A2 LTR MaLR 2 374 0 182 380 43 0 chr5 4543720 4543812 -195086338 + L3 LINE CR1 894 989 -588 1387 224 48 3 chr5 4544455 4544790 -195085360 - MER89 LTR ERV1 -22 537 188 2423 53 0 3 chr5 4546981 4547331 -195082819 + AluY SINE Alu 1 349 0 22 56 0 0 chr5 4547378 4547414 -195082736 + AT_rich Low_complexity Low_complexity 1 36 0 1972 189 21 0 chr5 4549847 4550229 -195079921 + MLT1B LTR MaLR 1 390 0 189 303 0 0 chr5 4551464 4551609 -195078541 + (CA)n Simple_repeat Simple_repeat 1 145 0 2474 94 46 6 chr5 4552457 4552807 -195077343 - THE1B LTR MaLR 0 364 1 264 184 0 0 chr5 4554151 4554200 -195075950 + Charlie1 DNA MER1_type 2713 2761 0 306 257 49 28 chr5 4554275 4554419 -195075731 + GA-rich Low_complexity Low_complexity 2 148 0 211 257 40 0 chr5 4555096 4555170 -195074980 + GA-rich Low_complexity Low_complexity 5 81 0 1335 173 82 12 chr5 4555212 4555467 -195074683 + AluJo SINE Alu 16 288 -24 213 39 0 0 chr5 4555476 4555502 -195074648 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1525 206 41 32 chr5 4555590 4556032 -195074118 - Charlie1b DNA MER1_type -4 519 74 1154 262 29 29 chr5 4556253 4556593 -195073557 + MLT1A1 LTR MaLR 26 365 0 373 254 18 26 chr5 4557831 4557945 -195072205 + Charlie1b DNA MER1_type 88 200 -323 728 197 8 0 chr5 4559767 4559899 -195070251 - FLAM_C SINE Alu 0 133 1 2743 250 40 22 chr5 4560201 4561022 -195069128 - L1ME1 LINE L1 -6 6160 5325 4549 161 46 23 chr5 4561033 4561874 -195068276 - L1MC1 LINE L1 -23 6310 5450 246 242 62 62 chr5 4563215 4563343 -195066807 + MER39 LTR ERV1 6 133 -574 910 253 77 33 chr5 4563364 4563700 -195066450 + MER39 LTR ERV1 357 707 0 4169 164 18 78 chr5 4564982 4565941 -195064209 - L1MB3 LINE L1 -3 6180 5280 728 226 43 43 chr5 4567866 4568074 -195062076 + MER3 DNA MER1_type 1 208 -1 1242 271 32 42 chr5 4568128 4568626 -195061524 + MLT1D LTR MaLR 1 493 -12 2167 131 0 0 chr5 4568627 4568932 -195061218 + AluSx SINE Alu 1 305 -7 1477 165 32 21 chr5 4568953 4569232 -195060918 + AluJb SINE Alu 1 282 -30 25 51 0 0 chr5 4569234 4569273 -195060877 + AT_rich Low_complexity Low_complexity 1 39 0 279 326 54 0 chr5 4570111 4570203 -195059947 - L2 LINE L2 -3 3310 3214 290 247 112 8 chr5 4570263 4570385 -195059765 + MLT1H LTR MaLR 82 173 -376 347 202 0 0 chr5 4570537 4570608 -195059542 + MLT1G1 LTR MaLR 477 593 -2 239 143 0 0 chr5 4570876 4570918 -195059232 + L2 LINE L2 3271 3312 -1 275 216 122 101 chr5 4571276 4571415 -195058735 + MIR3 SINE MIR 5 146 -62 1416 210 63 30 chr5 4573168 4573530 -195056620 + MLT1A2 LTR MaLR 1 374 0 397 300 95 21 chr5 4574324 4574514 -195055636 + MIR SINE MIR 23 226 -36 1521 219 135 12 chr5 4574623 4575039 -195055111 + MLT1C LTR MaLR 1 467 0 330 167 0 0 chr5 4575327 4575387 -195054763 + (TA)n Simple_repeat Simple_repeat 1 60 0 2746 114 30 2 chr5 4575391 4575784 -195054366 - MLT2A1 LTR ERVL -40 404 1 301 229 0 128 chr5 4575784 4575893 -195054257 + L1MC3 LINE L1 6627 6721 -1064 814 206 0 14 chr5 4575894 4576035 -195054115 - FLAM_C SINE Alu -2 141 3 3447 240 60 24 chr5 4576036 4577061 -195053089 + L1MC3 LINE L1 6715 7775 -10 1710 285 98 60 chr5 4577072 4579838 -195050312 + L1MEc LINE L1 1069 3912 -2303 1831 303 60 11 chr5 4580495 4581481 -195048669 + L1MEc LINE L1 3881 4914 -1301 4822 188 11 26 chr5 4582157 4583631 -195046519 - L1MA6 LINE L1 0 6300 4850 1002 162 11 0 chr5 4583623 4583808 -195046342 + L1 LINE L1 3961 4147 -1999 * 180 97 0 0 chr5 4584437 4584468 -195045682 + (CAAAAA)n Simple_repeat Simple_repeat 1 31 0 23 33 0 0 chr5 4586567 4586597 -195043553 + AT_rich Low_complexity Low_complexity 1 30 0 2188 99 17 0 chr5 4587261 4587553 -195042597 - AluSc SINE Alu -12 297 1 336 24 0 0 chr5 4588305 4588346 -195041804 + (CA)n Simple_repeat Simple_repeat 2 42 0 244 197 45 45 chr5 4589067 4589133 -195041017 + MIR SINE MIR 87 152 -110 1661 237 2 14 chr5 4589784 4590222 -195039928 - L1 LINE L1 -1034 5112 4680 25 0 0 0 chr5 4590250 4590275 -195039875 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 4590296 4590319 -195039831 + AT_rich Low_complexity Low_complexity 1 23 0 2334 98 22 182 chr5 4590494 4591033 -195039117 + MLT2A2 LTR ERVL 1 453 0 2177 108 17 0 chr5 4593160 4593456 -195036694 - AluSq SINE Alu -12 301 1 2048 106 4 7 chr5 4593500 4593774 -195036376 - AluSg SINE Alu -18 292 20 1758 166 3 7 chr5 4596309 4596620 -195033530 - AluSx SINE Alu 0 310 1 23 0 0 0 chr5 4599826 4599849 -195030301 + AT_rich Low_complexity Low_complexity 1 23 0 2071 141 0 3 chr5 4602767 4603066 -195027084 + AluSx SINE Alu 1 298 -14 219 339 147 16 chr5 4604116 4604429 -195025721 - L2 LINE L2 -2131 1183 830 339 298 32 8 chr5 4605831 4605955 -195024195 - MIR SINE MIR -19 243 117 240 261 39 78 chr5 4606683 4606836 -195023314 - L2 LINE L2 -528 2786 2640 362 337 0 23 chr5 4607017 4607369 -195022781 + (CA)n Simple_repeat Simple_repeat 1 343 0 311 312 13 26 chr5 4607381 4607535 -195022615 + (CA)n Simple_repeat Simple_repeat 1 152 0 298 346 12 12 chr5 4607578 4607740 -195022410 + (CA)n Simple_repeat Simple_repeat 1 162 0 228 319 42 56 chr5 4610116 4610260 -195019890 + L2 LINE L2 3163 3304 -9 1584 215 24 6 chr5 4611044 4611383 -195018767 + MLT2C1 LTR ERVL 5 349 -48 246 194 0 65 chr5 4611434 4611496 -195018654 + MLT2C1 LTR ERVL 463 520 0 317 345 0 35 chr5 4611767 4611912 -195018238 + L2 LINE L2 3165 3304 -9 389 211 21 18 chr5 4612871 4613212 -195016938 + (TAGA)n Simple_repeat Simple_repeat 1 342 0 901 126 11 0 chr5 4613256 4613431 -195016719 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 584 70 12 0 chr5 4613461 4613547 -195016603 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 1889 118 3 56 chr5 4614724 4615028 -195015122 - AluSx SINE Alu -20 292 5 411 153 0 48 chr5 4619107 4619296 -195010854 + (TA)n Simple_repeat Simple_repeat 1 180 0 286 105 0 0 chr5 4619296 4619334 -195010816 + (CA)n Simple_repeat Simple_repeat 1 38 0 2049 128 28 0 chr5 4620310 4620600 -195009550 + AluSq SINE Alu 1 298 -15 2685 113 8 8 chr5 4620898 4621262 -195008888 + THE1B LTR MaLR 1 364 0 180 275 203 48 chr5 4624662 4624869 -195005281 - L2 LINE L2 -20 3252 3014 1655 207 114 34 chr5 4625041 4625481 -195004669 - L1MB2 LINE L1 -2 6169 5695 696 239 0 0 chr5 4625519 4625649 -195004501 + FLAM_A SINE Alu 1 130 -3 287 327 138 11 chr5 4626136 4626396 -195003754 - MLT1J1 LTR MaLR -1 445 153 3800 180 46 18 chr5 4629720 4630502 -194999648 - Tigger3(Golem) DNA MER2_type 0 3029 2226 328 235 25 12 chr5 4630500 4630581 -194999569 - Tigger3(Golem) DNA MER2_type -2947 82 1 * 22 35 0 0 chr5 4631865 4631894 -194998256 + AT_rich Low_complexity Low_complexity 1 29 0 30 59 0 0 chr5 4633117 4633168 -194996982 + AT_rich Low_complexity Low_complexity 1 51 0 353 246 75 23 chr5 4633323 4633483 -194996667 - MLT1H LTR MaLR -2 593 421 21 36 0 0 chr5 4634750 4634778 -194995372 + AT_rich Low_complexity Low_complexity 1 28 0 281 282 69 46 chr5 4635067 4635241 -194994909 + L1M4 LINE L1 2444 2621 -3525 1658 159 24 24 chr5 4635310 4635629 -194994521 + AluJb SINE Alu 1 312 0 2213 126 129 26 chr5 4635906 4636294 -194993856 + MSTA LTR MaLR 1 428 0 418 171 0 27 chr5 4636729 4636840 -194993310 + (TCTA)n Simple_repeat Simple_repeat 2 109 0 2380 115 142 0 chr5 4637631 4638004 -194992146 + MSTA LTR MaLR 1 426 -2 260 242 11 77 chr5 4638058 4638149 -194992001 - MIR SINE MIR 0 262 178 302 345 92 6 chr5 4638460 4638634 -194991516 + MER5A DNA MER1_type 1 189 0 1545 113 54 14 chr5 4639253 4639474 -194990676 - MER30 DNA MER1_type 0 230 1 1037 193 11 0 chr5 4639846 4640033 -194990117 - Tigger3(Golem) DNA MER2_type -41 2988 2800 374 172 0 0 chr5 4640022 4640086 -194990064 - Tigger3(Golem) DNA MER2_type -2924 105 42 * 1045 240 183 48 chr5 4642935 4643373 -194986777 + MLT1D LTR MaLR 8 504 -1 1640 181 6 49 chr5 4645320 4645670 -194984480 + AluJb SINE Alu 1 312 0 229 346 15 31 chr5 4646098 4646228 -194983922 - L2 LINE L2 -5 3308 3181 264 345 29 12 chr5 4649926 4650097 -194980053 + ERVL LTR ERVL 461 634 -5130 340 361 43 29 chr5 4650287 4650567 -194979583 - LTR67 LTR ERVL -256 301 18 5833 72 1 0 chr5 4651929 4652652 -194977498 + HERVL LTR ERVL 3294 4017 -1637 27 0 0 0 chr5 4652663 4652690 -194977460 + AT_rich Low_complexity Low_complexity 1 27 0 205 128 43 0 chr5 4652795 4652842 -194977308 + CT-rich Low_complexity Low_complexity 2 50 0 23 0 0 0 chr5 4654365 4654388 -194975762 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 4655596 4655618 -194974532 + AT_rich Low_complexity Low_complexity 1 22 0 2720 200 43 23 chr5 4656313 4656919 -194973231 + L1MB8 LINE L1 5556 6173 -5 1934 167 6 13 chr5 4659450 4659848 -194970302 + AluSx SINE Alu 1 396 0 860 273 28 0 chr5 4659979 4660195 -194969955 - MER58A DNA MER1_type 0 224 3 206 327 0 0 chr5 4661703 4661755 -194968395 + L2 LINE L2 3195 3246 -67 23 0 0 0 chr5 4661896 4661919 -194968231 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr5 4661997 4662032 -194968118 + AT_rich Low_complexity Low_complexity 1 35 0 6131 107 53 6 chr5 4662347 4663247 -194966903 - L1PA10 LINE L1 -7 6161 5226 829 139 21 3 chr5 4663247 4663398 -194966752 + L1P LINE L1 3602 3750 -2396 356 266 186 0 chr5 4663746 4663870 -194966280 - LTR16C LTR ERVL -248 243 97 1957 142 44 0 chr5 4664028 4664323 -194965827 - AluY SINE Alu -3 308 1 23 0 0 0 chr5 4664582 4664605 -194965545 + AT_rich Low_complexity Low_complexity 1 23 0 257 296 57 0 chr5 4664642 4664801 -194965349 + L1MCc LINE L1 1369 1536 -4887 206 301 0 0 chr5 4664866 4664939 -194965211 - L2 LINE L2 0 3272 3200 210 191 0 0 chr5 4669588 4669630 -194960520 + T-rich Low_complexity Low_complexity 1 42 0 235 231 19 0 chr5 4670844 4670896 -194959254 + GA-rich Low_complexity Low_complexity 4 56 0 2128 82 11 4 chr5 4671071 4671373 -194958777 + AluY SINE Alu 1 304 0 21398 163 21 18 chr5 4672662 4675352 -194954798 + L1M1 LINE L1 12 2693 -4872 2472 170 26 5 chr5 4675352 4675769 -194954381 + MSTA LTR MaLR 1 426 -2 21398 163 21 18 chr5 4675769 4677067 -194953083 + L1M1 LINE L1 2693 4018 -3547 1286 142 5 5 chr5 4677067 4677285 -194952865 + L1MA2 LINE L1 6087 6304 0 21398 163 21 18 chr5 4677285 4677302 -194952848 + L1M1 LINE L1 4018 4033 -3532 2500 181 49 19 chr5 4677324 4677811 -194952339 + LTR26B LTR ERV1 30 531 0 2244 135 0 0 chr5 4679475 4679787 -194950363 + AluSx SINE Alu 1 312 0 5504 144 19 32 chr5 4680364 4681299 -194948851 + MER49 LTR ERV1 1 923 0 255 224 15 15 chr5 4681612 4681679 -194948471 + GA-rich Low_complexity Low_complexity 2 68 0 5515 162 12 17 chr5 4682378 4682736 -194947414 - L1PB1 LINE L1 0 6151 5793 311 18 71 0 chr5 4682736 4682792 -194947358 + (TA)n Simple_repeat Simple_repeat 2 61 0 5515 162 12 17 chr5 4682792 4684170 -194945980 - L1PB1 LINE L1 -358 5793 4427 * 5761 217 13 4 chr5 4684169 4685456 -194944694 + L1PB1 LINE L1 4516 5814 -1751 820 153 0 16 chr5 4686339 4686463 -194943687 - FLAM_C SINE Alu -11 122 1 24 0 0 0 chr5 4687039 4687063 -194943087 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr5 4687484 4687515 -194942635 + AT_rich Low_complexity Low_complexity 1 31 0 191 250 0 16 chr5 4687530 4687594 -194942556 + CT-rich Low_complexity Low_complexity 3 65 0 297 0 0 0 chr5 4688483 4688516 -194941634 + (TG)n Simple_repeat Simple_repeat 1 33 0 244 190 17 0 chr5 4688695 4688753 -194941397 + MER113 DNA MER1_type? 159 217 -304 1304 201 41 106 chr5 4689330 4689747 -194940403 + MLT1B LTR MaLR 1 390 0 342 290 38 30 chr5 4689790 4689921 -194940229 + L2 LINE L2 3182 3313 0 2152 196 27 7 chr5 4690772 4691186 -194938964 + MSTB LTR MaLR 1 422 -4 184 315 0 19 chr5 4694542 4694596 -194935554 + L2 LINE L2 3210 3262 -10 863 213 80 36 chr5 4697542 4697919 -194932231 - MLT1E1 LTR MaLR -2 591 174 1216 241 40 54 chr5 4697919 4698289 -194931861 - MLT1A1 LTR MaLR 0 365 1 863 213 80 36 chr5 4698289 4698360 -194931790 - MLT1E1 LTR MaLR -419 174 108 345 271 37 28 chr5 4698329 4698436 -194931714 - MLT1E LTR MaLR -427 166 59 * 426 313 56 0 chr5 4698720 4698918 -194931232 + LTR16C LTR ERVL 283 491 0 1502 183 54 0 chr5 4698978 4699220 -194930930 - MLT1C LTR MaLR -12 455 195 192 40 0 0 chr5 4699220 4699245 -194930905 + (TG)n Simple_repeat Simple_repeat 2 26 0 1502 183 54 0 chr5 4699245 4699281 -194930869 - MLT1C LTR MaLR -272 195 162 1137 167 15 0 chr5 4699349 4699553 -194930597 + L1MA4 LINE L1 6060 6266 -34 7650 246 61 45 chr5 4699555 4700307 -194929843 - L1 LINE L1 -1849 4501 3763 2031 125 3 0 chr5 4700307 4700603 -194929547 - AluY SINE Alu -4 307 11 7650 246 61 45 chr5 4700603 4702268 -194927882 - L1 LINE L1 -2587 3763 2127 2027 121 24 3 chr5 4702268 4702557 -194927593 - AluSx SINE Alu -17 295 1 7650 246 61 45 chr5 4702557 4703767 -194926383 - L1 LINE L1 -4223 2127 1053 1480 168 44 0 chr5 4703767 4704017 -194926133 + AluJb SINE Alu 43 303 -9 7650 246 61 45 chr5 4704017 4705084 -194925066 - L1 LINE L1 -5297 1053 5 211 209 45 0 chr5 4705193 4705260 -194924890 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 272 298 24 0 chr5 4705262 4705346 -194924804 + L1MEc LINE L1 118 203 -6193 331 359 18 12 chr5 4705385 4705552 -194924598 + L1MEc LINE L1 261 428 -5968 1090 278 35 12 chr5 4705718 4706056 -194924094 - L1MC/D LINE L1 -2208 5600 5255 284 309 36 47 chr5 4706170 4706448 -194923702 - L1MC/D LINE L1 -1115 5031 4757 2105 188 9 0 chr5 4706463 4706808 -194923342 - MER7A DNA MER2_type 0 346 1 507 311 117 30 chr5 4706974 4707575 -194922575 + L2 LINE L2 2662 3312 -1 489 296 5 7 chr5 4708046 4708509 -194921641 + (CA)n Simple_repeat Simple_repeat 1 461 0 254 292 6 0 chr5 4708567 4708728 -194921422 + (CA)n Simple_repeat Simple_repeat 1 162 0 186 189 0 0 chr5 4709256 4709293 -194920857 + (CAATA)n Simple_repeat Simple_repeat 2 38 0 1840 121 10 34 chr5 4711976 4712274 -194917876 - AluSx SINE Alu -21 291 1 238 330 154 0 chr5 4713387 4713478 -194916672 - MIR SINE MIR -88 120 16 461 351 20 15 chr5 4714122 4714324 -194915826 + MIR SINE MIR 48 250 -12 747 188 0 0 chr5 4714934 4715110 -194915040 + (TG)n Simple_repeat Simple_repeat 2 177 0 290 340 10 0 chr5 4715772 4715875 -194914275 + MIR SINE MIR 146 249 -13 200 33 0 33 chr5 4717194 4717224 -194912926 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 1474 181 63 20 chr5 4717229 4717257 -194912893 - AluJb SINE Alu 0 312 287 1068 44 22 39 chr5 4717257 4717439 -194912711 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1474 181 63 20 chr5 4717439 4717709 -194912441 - AluJb SINE Alu -25 287 1 2659 52 9 0 chr5 4718267 4718597 -194911553 + L1PA7 LINE L1 5817 6149 -5 4492 104 14 1 chr5 4718639 4719295 -194910855 + L1PB2 LINE L1 5486 6149 -2 424 270 15 7 chr5 4720461 4720598 -194909552 + (CA)n Simple_repeat Simple_repeat 2 139 0 406 294 106 42 chr5 4721160 4721425 -194908725 + L3b LINE CR1 1184 1465 -118 391 227 23 0 chr5 4721598 4721686 -194908464 - L1ME1 LINE L1 -20 6146 6057 352 173 111 0 chr5 4722927 4723008 -194907142 - L1MC4 LINE L1 -1339 6703 6614 309 262 71 0 chr5 4723024 4723108 -194907042 - L1MC4 LINE L1 -1339 6703 6614 300 267 47 0 chr5 4723044 4723130 -194907020 + L1MC4 LINE L1 6614 6703 -1339 * 613 166 6 30 chr5 4723250 4723419 -194906731 + CT-rich Low_complexity Low_complexity 1 165 0 25 0 0 0 chr5 4724390 4724415 -194905735 + AT_rich Low_complexity Low_complexity 1 25 0 2124 110 4 0 chr5 4724679 4725003 -194905147 - AluSx SINE Alu 0 325 1 491 191 48 40 chr5 4726101 4726227 -194903923 + MER5A DNA MER1_type 3 129 -60 1699 194 39 31 chr5 4726290 4726677 -194903473 + MLT1B LTR MaLR 1 390 0 2304 106 6 3 chr5 4726764 4727075 -194903075 + AluSx SINE Alu 1 312 0 198 323 85 15 chr5 4727468 4727598 -194902552 - MIR SINE MIR -44 218 80 23 0 0 0 chr5 4727981 4728004 -194902146 + AT_rich Low_complexity Low_complexity 1 23 0 439 253 88 24 chr5 4729647 4729817 -194900333 - L3b LINE CR1 -123 1460 1280 530 100 17 133 chr5 4729840 4729960 -194900190 - AluSg/x SINE Alu -17 292 187 1820 103 0 9 chr5 4729960 4730193 -194899957 - AluSc SINE Alu -78 231 1 338 264 75 57 chr5 4732009 4732168 -194897982 - LTR16A1 LTR ERVL -30 427 266 991 224 69 114 chr5 4732524 4732992 -194897158 - MLT1D LTR MaLR -16 434 4 2104 120 0 3 chr5 4734211 4734545 -194895605 + AluSx SINE Alu 1 333 0 258 186 147 85 chr5 4735258 4735387 -194894763 - MLT1H LTR MaLR -28 521 385 896 219 47 9 chr5 4736023 4736256 -194893894 + MLT1C LTR MaLR 1 242 -225 217 286 37 62 chr5 4736460 4736548 -194893602 + MIR SINE MIR 70 154 -108 1584 229 87 18 chr5 4736548 4736985 -194893165 - MLT1C LTR MaLR 0 467 1 217 286 37 62 chr5 4736985 4737057 -194893093 + MIR SINE MIR 154 226 -36 1916 155 0 10 chr5 4739350 4739659 -194890491 - AluSx SINE Alu -4 308 3 798 187 48 17 chr5 4739717 4739987 -194890163 - MLT1B LTR MaLR 0 390 6 21 0 0 0 chr5 4740024 4740045 -194890105 + AT_rich Low_complexity Low_complexity 1 21 0 802 186 19 86 chr5 4740117 4740152 -194889998 + MER58A DNA MER1_type 29 65 -2355 2305 41 0 11 chr5 4740152 4740420 -194889730 - AluY SINE Alu -5 306 42 802 186 19 86 chr5 4740420 4740594 -194889556 + MER58A DNA MER1_type 65 224 0 896 196 121 46 chr5 4740599 4740880 -194889270 + MER33 DNA MER1_type 1 302 -22 1131 111 0 0 chr5 4741495 4741648 -194888502 + AluSq SINE Alu 153 305 -8 200 173 19 19 chr5 4741662 4741714 -194888436 + T-rich Low_complexity Low_complexity 2 53 0 231 353 7 0 chr5 4742458 4742594 -194887556 + (CA)n Simple_repeat Simple_repeat 1 137 0 1381 178 67 38 chr5 4742845 4743050 -194887100 - MER47A DNA MER2_type -1969 354 134 642 222 0 0 chr5 4743050 4743167 -194886983 + FLAM_C SINE Alu 1 117 -16 1381 178 67 38 chr5 4743167 4743304 -194886846 - MER47A DNA MER2_type -2189 134 2 300 316 89 41 chr5 4744460 4744922 -194885228 + L1MC/D LINE L1 5254 5737 -2071 357 291 96 25 chr5 4746361 4746560 -194883590 + MIR SINE MIR 32 244 -18 1552 209 3 0 chr5 4747442 4747900 -194882250 - AluJo SINE Alu 0 465 7 5730 123 22 2 chr5 4747917 4748792 -194881358 + L1PA13 LINE L1 5279 6160 -3 240 60 80 0 chr5 4749425 4749475 -194880675 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 2106 94 7 0 chr5 4749476 4749752 -194880398 - AluSp SINE Alu -35 278 1 810 193 92 18 chr5 4750868 4751086 -194879064 + MER96B DNA MER1_type? 3 236 -181 247 179 30 15 chr5 4751255 4751322 -194878828 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 2726 211 58 53 chr5 4752936 4753816 -194876334 + L1ME2 LINE L1 5280 6163 -1 327 346 0 7 chr5 4754420 4754556 -194875594 - L2 LINE L2 0 3272 3138 2022 116 16 7 chr5 4755106 4755409 -194874741 - AluSc SINE Alu -1 308 3 1741 168 0 29 chr5 4757515 4757831 -194872319 - AluJb SINE Alu -5 307 1 398 304 7 15 chr5 4758625 4758760 -194871390 - MIR SINE MIR -55 153 20 184 276 161 0 chr5 4760361 4760448 -194869702 - MIR SINE MIR -131 131 31 276 204 0 0 chr5 4762137 4762191 -194867959 - L1PA11 LINE L1 -1028 5118 5065 5800 130 16 4 chr5 4762191 4763226 -194866924 + L1PA11 LINE L1 5129 6174 0 231 387 15 0 chr5 4763498 4763635 -194866515 + MIR SINE MIR 17 155 -107 501 198 0 0 chr5 4764316 4764417 -194865733 - AluJb SINE Alu 0 312 212 2197 118 0 3 chr5 4766068 4766364 -194863786 - AluSx SINE Alu -17 295 1 2228 174 46 16 chr5 4766512 4767013 -194863137 - L1MA9 LINE L1 -6 6306 5791 458 265 53 0 chr5 4766868 4767038 -194863112 - L1PA15 LINE L1 -227 5938 5760 459 246 49 0 chr5 4767164 4767286 -194862864 - MIR SINE MIR -71 191 64 353 125 0 0 chr5 4767327 4767383 -194862767 - U2 snRNA snRNA -128 60 5 5002 146 3 8 chr5 4767383 4768264 -194861886 + L1PA10 LINE L1 4088 4964 -1182 1934 133 47 9 chr5 4768267 4768606 -194861544 - THE1C LTR MaLR -23 352 1 6342 92 8 1 chr5 4768614 4769790 -194860360 + L1PA10 LINE L1 4966 6157 -11 2591 42 0 6 chr5 4771569 4771882 -194858268 + AluY SINE Alu 1 311 0 24 0 0 0 chr5 4774107 4774131 -194856019 + AT_rich Low_complexity Low_complexity 1 24 0 5080 19 3 0 chr5 4776317 4776906 -194853244 + L1PA3 LINE L1 5565 6155 0 34 24 0 0 chr5 4776910 4776951 -194853199 + AT_rich Low_complexity Low_complexity 1 41 0 2449 183 41 33 chr5 4777859 4778363 -194851787 + MLT2B3 LTR ERVL 2 512 -42 435 100 0 0 chr5 4778363 4778433 -194851717 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 2449 183 41 33 chr5 4778433 4778469 -194851681 + MLT2B3 LTR ERVL 512 546 -8 262 236 0 22 chr5 4778470 4778559 -194851591 + (CATATA)n Simple_repeat Simple_repeat 6 92 0 753 209 0 37 chr5 4778586 4778749 -194851401 - MER2 DNA MER2_type -183 162 6 279 272 172 28 chr5 4779732 4779912 -194850238 + MLT1H LTR MaLR 79 284 -265 2055 111 50 10 chr5 4780346 4780644 -194849506 - AluSg SINE Alu 0 310 1 27 62 0 0 chr5 4780949 4780997 -194849153 + AT_rich Low_complexity Low_complexity 1 48 0 877 238 49 8 chr5 4781144 4781388 -194848762 + LTR53 LTR ERVL 1 254 -265 406 177 62 9 chr5 4781392 4781505 -194848645 + MLT1A1 LTR MaLR 5 123 -242 1138 216 0 4 chr5 4781705 4781950 -194848200 + MLT1A1 LTR MaLR 122 365 0 1028 203 103 0 chr5 4781953 4782195 -194847955 + LTR53 LTR ERVL 253 519 0 2385 104 0 0 chr5 4783022 4783331 -194846819 - AluSx SINE Alu -3 309 1 309 89 0 0 chr5 4783395 4783411 -194846739 + (CA)n Simple_repeat Simple_repeat 1 61 0 309 89 0 0 chr5 4783411 4783456 -194846694 + (CA)n Simple_repeat Simple_repeat 2 46 0 1145 279 91 66 chr5 4783482 4784579 -194845571 - L1MCc LINE L1 -4403 2719 1651 396 0 0 0 chr5 4784579 4784623 -194845527 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 1145 279 91 66 chr5 4784623 4785518 -194844632 - L1MCc LINE L1 -5471 1651 457 1147 289 63 20 chr5 4785807 4786364 -194843786 - L1MCc LINE L1 -5824 599 19 318 203 14 40 chr5 4786384 4786439 -194843711 + L2 LINE L2 3234 3288 -25 2437 76 0 25 chr5 4786439 4786754 -194843396 - AluY SINE Alu -4 307 1 318 203 14 40 chr5 4786754 4786772 -194843378 + L2 LINE L2 3288 3305 -8 214 200 0 0 chr5 4787487 4787527 -194842623 + T-rich Low_complexity Low_complexity 1 40 0 289 230 40 0 chr5 4789292 4789366 -194840784 + MER89 LTR ERV1 11 87 -472 * 1476 214 14 6 chr5 4789341 4789701 -194840449 + MER89 LTR ERV1 197 559 0 40 0 0 0 chr5 4791377 4791417 -194838733 + AT_rich Low_complexity Low_complexity 1 40 0 216 0 0 0 chr5 4792411 4792435 -194837715 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 431 333 6 0 chr5 4793106 4793271 -194836879 - MER63B DNA MER1_type -270 166 1 2194 114 0 0 chr5 4793564 4793861 -194836289 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 4794402 4794423 -194835727 + AT_rich Low_complexity Low_complexity 1 21 0 452 84 0 14 chr5 4794480 4794551 -194835599 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 232 235 23 68 chr5 4794553 4794685 -194835465 + L1 LINE L1 3797 3922 -2224 586 306 108 54 chr5 4794714 4795289 -194834861 + L1ME3 LINE L1 3949 4554 -1592 590 292 70 46 chr5 4796213 4797249 -194832901 + L1ME3 LINE L1 4800 5858 -304 1816 205 30 5 chr5 4797267 4797671 -194832479 + MLT2C2 LTR ERVL 3 416 -48 1328 185 110 31 chr5 4797954 4798273 -194831877 + MER2 DNA MER2_type 1 344 0 1063 144 0 12 chr5 4798280 4798471 -194831679 - AluSg/x SINE Alu 0 312 134 2048 140 0 0 chr5 4798471 4798763 -194831387 - AluSg SINE Alu -17 293 2 538 264 42 14 chr5 4799065 4799209 -194830941 - MER5B DNA MER1_type -12 166 19 45 34 0 0 chr5 4800137 4800196 -194829954 + AT_rich Low_complexity Low_complexity 1 59 0 404 242 30 0 chr5 4802602 4802701 -194827449 + MIR SINE MIR 110 211 -51 1114 305 32 29 chr5 4802717 4803159 -194826991 - L2 LINE L2 -1045 2269 1827 1983 154 0 3 chr5 4803401 4803700 -194826450 + AluSx SINE Alu 1 298 -14 2679 225 72 115 chr5 4804128 4805543 -194824607 - MLT1A1-int LTR MaLR -13 1358 5 1326 227 16 40 chr5 4805547 4805921 -194824229 - MLT1A1 LTR MaLR 0 365 1 2107 218 67 19 chr5 4805941 4806439 -194823711 - MLT1E1 LTR MaLR -11 643 109 1778 201 41 41 chr5 4806439 4806906 -194823244 + MLT1C LTR MaLR 1 467 0 2107 218 67 19 chr5 4806906 4807021 -194823129 - MLT1E1 LTR MaLR -545 109 1 2486 119 11 0 chr5 4807151 4807522 -194822628 + THE1C LTR MaLR 1 375 0 358 240 16 8 chr5 4807554 4807647 -194822503 + MIR3 SINE MIR 105 199 -9 21 57 0 0 chr5 4808120 4808155 -194821995 + AT_rich Low_complexity Low_complexity 1 35 0 240 176 0 0 chr5 4808187 4808255 -194821895 + (TA)n Simple_repeat Simple_repeat 1 68 0 386 176 0 35 chr5 4809505 4809590 -194820560 - MER3 DNA MER1_type -2 207 126 957 161 57 0 chr5 4809593 4809804 -194820346 + L1MB3 LINE L1 5669 5891 -292 810 198 21 66 chr5 4809869 4810157 -194819993 - L1MA4 LINE L1 -1 6299 6025 195 267 35 69 chr5 4810341 4810457 -194819693 - MIR SINE MIR -116 146 35 28 0 0 0 chr5 4811691 4811719 -194818431 + AT_rich Low_complexity Low_complexity 1 28 0 3348 207 7 7 chr5 4811850 4812603 -194817547 - L1 LINE L1 -1884 4262 3510 4627 176 47 7 chr5 4812610 4813812 -194816338 + L1PA16 LINE L1 4900 6159 -7 2170 117 48 31 chr5 4815086 4815444 -194814706 - THE1B LTR MaLR 0 364 1 320 357 24 18 chr5 4815454 4815622 -194814528 + MIR SINE MIR 66 234 -28 243 290 117 51 chr5 4816118 4816332 -194813818 - L2 LINE L2 -812 2502 2275 23 33 0 0 chr5 5016679 5016709 -194613441 + AT_rich Low_complexity Low_complexity 1 30 0 189 107 0 0 chr5 5017369 5017397 -194612753 + (T)n Simple_repeat Simple_repeat 1 28 0 222 116 0 0 chr5 5020370 5020413 -194609737 + (T)n Simple_repeat Simple_repeat 1 43 0 769 258 114 54 chr5 5024995 5025561 -194604589 - MLT1F1 LTR MaLR -2 593 14 449 243 20 0 chr5 5025893 5026045 -194604105 - L1 LINE L1 -2793 3353 3199 5701 186 30 0 chr5 5026050 5027171 -194602979 + L1 LINE L1 3729 4883 -1263 1904 152 7 0 chr5 5028815 5029111 -194601039 + AluSx SINE Alu 1 298 -14 298 234 138 48 chr5 5029290 5029435 -194600715 + MLT1J2 LTR MaLR 291 448 -2 267 40 40 20 chr5 5031248 5031298 -194598852 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 1260 120 0 6 chr5 5032035 5032258 -194597892 - AluSp SINE Alu 0 353 132 738 291 35 14 chr5 5032363 5032809 -194597341 + MLT1F1 LTR MaLR 14 558 -9 1500 197 112 0 chr5 5034744 5035049 -194595101 - MLT1A1 LTR MaLR -12 353 15 221 56 0 28 chr5 5036704 5036740 -194593410 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 3943 28 2 0 chr5 5036740 5037200 -194592950 - L1PA3 LINE L1 -24 6131 5671 3500 25 3 0 chr5 5037207 5037653 -194592497 + L1PA3 LINE L1 5225 5671 -484 299 298 6 17 chr5 5038226 5038404 -194591746 + (TA)n Simple_repeat Simple_repeat 2 177 0 246 246 15 15 chr5 5038531 5038596 -194591554 - L2 LINE L2 -97 3216 3152 869 211 6 0 chr5 5038601 5038772 -194591378 + MER2 DNA MER2_type 2 173 -172 564 284 79 41 chr5 5038924 5039241 -194590909 - L2 LINE L2 -167 3146 2818 214 296 49 12 chr5 5039241 5039322 -194590828 - L2 LINE L2 -629 2685 2602 242 261 35 61 chr5 5039647 5039762 -194590388 + MLT1J2 LTR MaLR 338 449 -1 2117 150 0 0 chr5 5040153 5040466 -194589684 - AluSq SINE Alu 0 313 1 1642 262 27 53 chr5 5041166 5041903 -194588247 - L1ME1 LINE L1 -8 6656 5939 369 123 18 0 chr5 5041906 5041963 -194588187 + MSTA LTR MaLR 1 58 -370 406 91 0 9 chr5 5041964 5042028 -194588122 - MLT2A1 LTR ERVL -2 442 388 307 196 0 0 chr5 5042044 5042100 -194588050 - L1MC4 LINE L1 -1339 6703 6648 2941 71 2 40 chr5 5042112 5042532 -194587618 - MLT2A1 LTR ERVL -40 404 1 2873 87 14 2 chr5 5042532 5042948 -194587202 - HERVL-A1-A1 LTR ERVL 0 5654 5234 33495 82 4 1 chr5 5043048 5047390 -194582760 - HERVL-A1-A1 LTR ERVL -1292 4362 5 3172 73 4 77 chr5 5047394 5047873 -194582277 - MLT2A1 LTR ERVL 0 444 1 2192 134 32 16 chr5 5047873 5048242 -194581908 + MSTA LTR MaLR 54 428 0 2379 259 97 24 chr5 5048242 5049395 -194580755 - L1ME1 LINE L1 -733 5943 4701 479 260 39 43 chr5 5049398 5049606 -194580544 - L1ME1 LINE L1 -4953 1693 1487 1499 281 102 31 chr5 5049615 5050203 -194579947 - L1ME1 LINE L1 -5639 903 274 1221 150 50 32 chr5 5050227 5050447 -194579703 - AluSg/x SINE Alu 0 312 89 481 281 121 0 chr5 5050460 5050659 -194579491 - L1ME1 LINE L1 -6306 236 14 30 59 0 0 chr5 5051215 5051266 -194578884 + AT_rich Low_complexity Low_complexity 1 51 0 247 243 14 27 chr5 5051590 5051664 -194578486 + CT-rich Low_complexity Low_complexity 2 74 0 222 338 13 13 chr5 5052885 5052962 -194577188 + L2 LINE L2 3172 3248 -24 1031 271 54 19 chr5 5053598 5054023 -194576127 - L1ME1 LINE L1 -7 6228 5789 4761 281 72 41 chr5 5054046 5054889 -194575261 - L1ME1 LINE L1 -743 5472 4656 2058 121 0 0 chr5 5054889 5055171 -194574979 - AluSq SINE Alu -11 302 21 4761 281 72 41 chr5 5055171 5058412 -194571738 - L1ME1 LINE L1 -1559 4656 1316 261 254 106 48 chr5 5058640 5059023 -194571127 - L1ME1 LINE L1 -5180 1060 670 1544 225 62 58 chr5 5059074 5059572 -194570578 - MLT1D LTR MaLR 0 505 6 355 385 95 22 chr5 5059577 5059935 -194570215 - L1ME1 LINE L1 -5785 611 228 456 136 0 0 chr5 5059987 5060053 -194570097 - AluS SINE Alu -244 66 1 198 0 0 0 chr5 5060485 5060507 -194569643 + (GA)n Simple_repeat Simple_repeat 1 22 0 340 248 0 9 chr5 5060520 5060629 -194569521 - L1ME LINE L1 -5079 991 884 1365 271 103 21 chr5 5060640 5061108 -194569042 + MLT2B1 LTR ERVL 1 506 -14 1465 306 72 8 chr5 5061170 5061924 -194568226 - L1ME LINE L1 -5242 828 27 1064 179 145 4 chr5 5062256 5062338 -194567812 - MLT1C LTR MaLR -173 294 225 240 35 0 0 chr5 5062338 5062367 -194567783 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 348 24 0 0 chr5 5062366 5062407 -194567743 + (TG)n Simple_repeat Simple_repeat 2 42 0 1064 179 145 4 chr5 5062367 5062558 -194567592 - MLT1C LTR MaLR -242 225 28 23 68 0 0 chr5 5062787 5062831 -194567319 + AT_rich Low_complexity Low_complexity 1 44 0 414 248 0 44 chr5 5062831 5062968 -194567182 + L1 LINE L1 2809 2939 -3207 218 222 0 16 chr5 5063926 5063989 -194566161 + (TA)n Simple_repeat Simple_repeat 2 63 0 2353 73 0 0 chr5 5064532 5064833 -194565317 - AluY SINE Alu -10 301 1 193 229 0 42 chr5 5065257 5065305 -194564845 + L2 LINE L2 3218 3263 -9 5561 220 53 45 chr5 5065921 5067551 -194562599 - L1MC3 LINE L1 -229 8054 6412 271 227 93 27 chr5 5067553 5067628 -194562522 - L1MC3 LINE L1 -2182 6101 6022 656 184 32 130 chr5 5067648 5067931 -194562219 - L1MC3 LINE L1 -816 5828 5843 2210 109 0 0 chr5 5067931 5068224 -194561926 - AluSx SINE Alu -17 295 3 656 184 32 130 chr5 5068224 5068345 -194561805 - L1MC3 LINE L1 -800 5844 5713 524 140 11 0 chr5 5068395 5068488 -194561662 + CT-rich Low_complexity Low_complexity 1 94 0 9225 190 32 25 chr5 5068526 5069599 -194560551 + L1M1 LINE L1 9 1072 -6493 2090 164 5 19 chr5 5069599 5069966 -194560184 + THE1B LTR MaLR 3 364 0 9225 190 32 25 chr5 5069966 5071798 -194558352 + L1M1 LINE L1 1072 3617 -3948 1929 111 26 15 chr5 5071956 5072297 -194557853 + L1MA3 LINE L1 3273 3617 -3948 207 100 0 0 chr5 5072341 5072402 -194557748 + (CA)n Simple_repeat Simple_repeat 1 91 0 207 100 0 0 chr5 5072402 5072432 -194557718 + (CA)n Simple_repeat Simple_repeat 1 30 0 1053 227 141 29 chr5 5072468 5072851 -194557299 + L1MA3 LINE L1 3628 4053 -3512 7463 111 9 0 chr5 5072851 5073946 -194556204 + THE1B-int LTR MaLR 476 1580 0 505 66 197 0 chr5 5073946 5074022 -194556128 + THE1B LTR MaLR 1 91 -273 235 211 0 35 chr5 5074043 5074100 -194556050 + THE1B-int LTR MaLR 1 55 -1596 2097 125 48 28 chr5 5074112 5074504 -194555646 + MSTA LTR MaLR 29 428 0 5590 166 15 22 chr5 5074504 5075929 -194554221 + L1MA3 LINE L1 5829 7240 -484 2354 97 3 0 chr5 5075929 5076229 -194553921 + AluSp SINE Alu 1 301 -12 5590 166 15 22 chr5 5076229 5076710 -194553440 + L1MA3 LINE L1 7240 7723 -1 411 269 0 14 chr5 5076756 5076901 -194553249 - L1MC3 LINE L1 -1114 5530 5388 310 216 85 45 chr5 5076918 5077094 -194553056 - L1MC3 LINE L1 -4413 2231 2049 467 31 10 188 chr5 5077137 5077177 -194552973 + MADE1 DNA Mariner 1 16 -64 2439 73 3 0 chr5 5077177 5077480 -194552670 - AluY SINE Alu -7 304 1 467 31 10 188 chr5 5077480 5077535 -194552615 + MADE1 DNA Mariner 16 79 -1 602 246 191 15 chr5 5077561 5077890 -194552260 - L1MC3 LINE L1 -4887 1759 1373 303 330 183 16 chr5 5077891 5078273 -194551877 - L1MC3 LINE L1 -5202 1344 899 278 295 9 9 chr5 5078351 5078456 -194551694 - L1MC3 LINE L1 -5668 874 770 396 296 24 19 chr5 5078928 5079134 -194551016 - L1MC3 LINE L1 -6320 222 16 553 234 0 7 chr5 5080369 5080523 -194549627 - L1MA10 LINE L1 -1 6333 6181 543 249 42 14 chr5 5080539 5080733 -194549417 + MLT1F1 LTR MaLR 388 565 -2 26 74 0 0 chr5 5080736 5080790 -194549360 + AT_rich Low_complexity Low_complexity 1 54 0 189 159 0 0 chr5 5082511 5082555 -194547595 + (TG)n Simple_repeat Simple_repeat 1 44 0 290 349 127 16 chr5 5083697 5083886 -194546264 + MIR SINE MIR 15 224 -38 188 381 0 0 chr5 5086174 5086271 -194543879 + L2 LINE L2 2397 2493 -821 553 117 53 12 chr5 5086851 5087022 -194543128 + (CA)n Simple_repeat Simple_repeat 1 178 0 449 86 43 0 chr5 5087102 5087195 -194542955 + (CA)n Simple_repeat Simple_repeat 2 98 0 24 0 0 0 chr5 5088137 5088161 -194541989 + AT_rich Low_complexity Low_complexity 1 24 0 1456 200 28 17 chr5 5088161 5088451 -194541699 - AluJo SINE Alu -19 293 1 201 94 0 0 chr5 5088490 5088522 -194541628 + (CA)n Simple_repeat Simple_repeat 1 32 0 231 36 0 0 chr5 5088811 5088839 -194541311 + (CA)n Simple_repeat Simple_repeat 2 29 0 26 64 0 0 chr5 5089264 5089311 -194540839 + AT_rich Low_complexity Low_complexity 1 47 0 225 247 23 132 chr5 5089829 5090003 -194540147 + MLT1H LTR MaLR 392 546 -3 364 391 31 9 chr5 5090647 5090872 -194539278 - MIR SINE MIR -17 245 16 192 125 0 0 chr5 5091300 5091332 -194538818 + (TG)n Simple_repeat Simple_repeat 1 32 0 2211 109 10 3 chr5 5092336 5092640 -194537510 - AluSc SINE Alu -3 306 1 2446 75 16 0 chr5 5093675 5093980 -194536170 - AluSg SINE Alu 0 310 1 561 232 91 17 chr5 5094334 5094542 -194535608 - MLT1C LTR MaLR -19 428 227 1831 172 0 26 chr5 5095335 5095643 -194534507 - AluSx SINE Alu -12 300 1 232 310 69 0 chr5 5096364 5096480 -194533670 + L2 LINE L2 3189 3312 -1 505 294 133 64 chr5 5096534 5096969 -194533181 - L2 LINE L2 -1 3312 2848 554 262 142 44 chr5 5097002 5097433 -194532717 + L2 LINE L2 2324 2796 -518 258 313 14 21 chr5 5097450 5097594 -194532556 - LTR33 LTR ERVL -2 519 377 33 25 0 0 chr5 5098257 5098297 -194531853 + AT_rich Low_complexity Low_complexity 1 40 0 275 143 0 18 chr5 5098324 5098380 -194531770 + (TG)n Simple_repeat Simple_repeat 1 55 0 1045 240 108 39 chr5 5098398 5098832 -194531318 - MLT2B1 LTR ERVL -54 466 3 21 0 0 0 chr5 5099156 5099177 -194530973 + AT_rich Low_complexity Low_complexity 1 21 0 1130 216 115 49 chr5 5099216 5099684 -194530466 + MLT1D LTR MaLR 7 505 0 432 266 147 39 chr5 5101136 5101422 -194528728 + L2 LINE L2 2027 2343 -971 383 305 107 27 chr5 5102805 5103067 -194527083 - L2 LINE L2 -11 3302 3020 210 91 0 0 chr5 5103099 5103132 -194527018 + (CA)n Simple_repeat Simple_repeat 2 34 0 374 309 0 5 chr5 5103147 5103361 -194526789 + (CA)n Simple_repeat Simple_repeat 1 212 0 459 356 0 0 chr5 5103375 5103555 -194526595 + (CA)n Simple_repeat Simple_repeat 1 180 0 2447 130 8 3 chr5 5103878 5104240 -194525910 + THE1B LTR MaLR 1 364 0 627 391 65 15 chr5 5104819 5105361 -194524789 + L3 LINE CR1 209 777 -800 65 35 0 0 chr5 5105845 5105931 -194524219 + AT_rich Low_complexity Low_complexity 1 86 0 23 0 0 0 chr5 5108266 5108289 -194521861 + AT_rich Low_complexity Low_complexity 1 23 0 689 209 0 0 chr5 5110652 5110800 -194519350 - L1MA3 LINE L1 0 6305 6158 816 155 128 59 chr5 5110804 5110960 -194519190 - MSTA LTR MaLR -228 200 56 1995 136 51 28 chr5 5110960 5111313 -194518837 + THE1B LTR MaLR 4 364 0 11443 105 3 5 chr5 5111313 5112896 -194517254 + THE1B-int LTR MaLR 1 1580 0 1917 140 68 31 chr5 5112896 5113247 -194516903 + THE1B LTR MaLR 1 364 0 816 155 128 59 chr5 5113247 5113275 -194516875 - MSTA LTR MaLR -371 57 1 3347 183 13 10 chr5 5113277 5113987 -194516163 - L1MA3 LINE L1 -145 6160 5449 2664 175 24 0 chr5 5113991 5114678 -194515472 + L1M1 LINE L1 4783 5489 -743 482 135 0 67 chr5 5114801 5114905 -194515245 - L1PB4 LINE L1 -8 6148 6052 1833 268 44 33 chr5 5114924 5115674 -194514476 - L1ME1 LINE L1 -4 6162 5405 22 0 0 0 chr5 5115927 5115949 -194514201 + AT_rich Low_complexity Low_complexity 1 22 0 195 69 0 0 chr5 5115972 5116001 -194514149 + (TATAA)n Simple_repeat Simple_repeat 2 30 0 4918 217 45 63 chr5 5116005 5117293 -194512857 + L1 LINE L1 3302 4551 -1595 826 86 0 0 chr5 5117293 5117409 -194512741 + L1PA13 LINE L1 6041 6156 -7 4918 217 45 63 chr5 5117409 5117909 -194512241 + L1 LINE L1 4551 5058 -1088 1840 264 28 10 chr5 5118250 5118856 -194511294 + L1MD3 LINE L1 7321 7937 -58 773 259 18 54 chr5 5118872 5119204 -194510946 - L1MA9 LINE L1 -40 6272 5953 776 268 20 0 chr5 5121673 5121923 -194508227 + L1MD3 LINE L1 7741 7995 0 277 301 87 0 chr5 5122422 5122525 -194507625 - L2 LINE L2 0 3272 3161 29 60 0 0 chr5 5124237 5124287 -194505863 + AT_rich Low_complexity Low_complexity 1 50 0 189 107 0 0 chr5 5124894 5124922 -194505228 + (GAAAA)n Simple_repeat Simple_repeat 4 31 0 21 36 0 0 chr5 5125803 5125831 -194504319 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 5127407 5127430 -194502720 + AT_rich Low_complexity Low_complexity 1 23 0 307 94 0 0 chr5 5129434 5129487 -194500663 + AluSc SINE Alu 247 299 0 265 335 98 56 chr5 5131243 5131724 -194498426 - L2 LINE L2 -3 3310 2810 561 228 35 7 chr5 5131901 5132046 -194498104 - Tigger7 DNA MER2_type 0 2587 2439 * 1646 186 39 6 chr5 5132041 5132374 -194497776 - Tigger7 DNA MER2_type -2143 344 1 669 323 26 9 chr5 5135758 5135990 -194494160 - MIR SINE MIR -18 244 9 738 236 33 19 chr5 5137766 5137978 -194492172 + MER20 DNA MER1_type 1 215 -4 855 108 8 0 chr5 5139227 5139356 -194490794 - L1PA7 LINE L1 -1 6153 6024 220 358 0 0 chr5 5139718 5139785 -194490365 + L2 LINE L2 2448 2514 -800 222 301 83 95 chr5 5140064 5140583 -194489567 - L2 LINE L2 -264 3049 2504 22 56 0 0 chr5 5143273 5143309 -194486841 + AT_rich Low_complexity Low_complexity 1 36 0 498 194 7 21 chr5 5143900 5144044 -194486106 + GA-rich Low_complexity Low_complexity 3 144 0 1778 185 13 3 chr5 5147099 5147521 -194482629 - AluJb SINE Alu 0 425 1 4736 91 48 14 chr5 5147563 5148276 -194481874 - L1PA11 LINE L1 -2 6172 5436 1152 220 81 55 chr5 5149515 5149790 -194480360 + MLT1C LTR MaLR 1 294 -173 2127 126 3 10 chr5 5149790 5150099 -194480051 + AluSq SINE Alu 5 311 -2 1152 220 81 55 chr5 5150099 5150278 -194479872 + MLT1C LTR MaLR 294 467 0 324 279 9 36 chr5 5152708 5152819 -194477331 + MIR SINE MIR 23 130 -132 481 268 118 52 chr5 5152851 5153232 -194476918 - LTR33A LTR ERVL 0 523 118 2691 92 16 3 chr5 5154382 5154752 -194475398 + THE1C LTR MaLR 1 375 0 414 129 5 4 chr5 5154782 5154992 -194475158 - AluSc SINE Alu -18 291 1 21 36 0 0 chr5 5155025 5155053 -194475097 + AT_rich Low_complexity Low_complexity 1 28 0 1282 137 11 157 chr5 5155054 5155411 -194474739 - L1MA4 LINE L1 -281 6019 5715 1998 153 3 0 chr5 5155437 5155737 -194474413 + AluSx SINE Alu 1 301 -11 302 271 126 13 chr5 5156381 5156532 -194473618 + MER58C DNA MER1_type 44 211 -4 302 260 30 40 chr5 5156615 5156715 -194473435 - L2 LINE L2 -6 3307 3209 501 291 77 52 chr5 5156748 5157150 -194473000 - MLT1H LTR MaLR 0 549 138 215 53 0 53 chr5 5159362 5159400 -194470750 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 747 326 94 32 chr5 5159905 5160160 -194469990 + L2 LINE L2 2445 2683 -630 360 0 0 0 chr5 5160160 5160200 -194469950 + (CA)n Simple_repeat Simple_repeat 2 41 0 747 326 94 32 chr5 5160200 5160754 -194469396 + L2 LINE L2 2683 3313 0 229 293 65 49 chr5 5160871 5160994 -194469156 + MIR SINE MIR 23 147 -61 929 230 102 59 chr5 5162803 5162865 -194467285 - MLT1C LTR MaLR -4 463 405 2707 75 0 0 chr5 5162865 5163213 -194466937 + L1PA7 LINE L1 5799 6146 -8 929 230 102 59 chr5 5163213 5163589 -194466561 - MLT1C LTR MaLR -62 405 6 268 301 81 97 chr5 5164157 5164343 -194465807 - MIR SINE MIR -12 250 68 21 0 0 0 chr5 5165315 5165336 -194464814 + AT_rich Low_complexity Low_complexity 1 21 0 1462 226 88 94 chr5 5166463 5167335 -194462815 + LTR28 LTR ERV1 1 1020 0 254 372 96 5 chr5 5167441 5167629 -194462521 + MIR SINE MIR 40 244 -18 188 357 161 0 chr5 5167975 5168087 -194462063 + L2 LINE L2 2931 3060 -253 1584 218 40 42 chr5 5168818 5169429 -194460721 + MLT1B-int LTR MaLR 1 726 -645 1304 264 59 25 chr5 5169769 5170174 -194459976 + MLT1B-int LTR MaLR 1317 1735 0 804 215 98 87 chr5 5170189 5170547 -194459603 + MLT1B LTR MaLR 13 374 -16 212 179 0 0 chr5 5171398 5171437 -194458713 + T-rich Low_complexity Low_complexity 1 39 0 1014 82 0 0 chr5 5171952 5172098 -194458052 + (CAT)n Simple_repeat Simple_repeat 3 148 0 743 215 145 8 chr5 5172470 5172712 -194457438 + L1ME1 LINE L1 5887 6161 -5 209 89 44 22 chr5 5174177 5174222 -194455928 + A-rich Low_complexity Low_complexity 2 47 0 1280 174 103 88 chr5 5174351 5174748 -194455402 + MER57A LTR ERV1 1 403 0 331 282 92 6 chr5 5176304 5176478 -194453672 + LTR16A LTR ERVL 161 349 -101 301 188 0 14 chr5 5176498 5176567 -194453583 - MLT2B1 LTR ERVL -47 367 300 198 0 0 0 chr5 5176595 5176617 -194453533 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 742 261 15 44 chr5 5176666 5176938 -194453212 - MLT2B1 LTR ERVL -255 265 2 681 231 11 0 chr5 5177275 5177461 -194452689 - MER53 DNA DNA -1 188 1 1407 229 54 9 chr5 5178723 5179072 -194451078 + MLT1A1 LTR MaLR 1 365 0 28 29 0 0 chr5 5179105 5179140 -194451010 + AT_rich Low_complexity Low_complexity 1 35 0 635 327 133 35 chr5 5179705 5180366 -194449784 - L2 LINE L2 -8 3305 2563 1972 129 7 0 chr5 5181148 5181451 -194448699 - AluSq SINE Alu 0 305 1 9307 199 22 20 chr5 5182500 5185876 -194444274 - L1MA6 LINE L1 -5 6295 2915 225 323 50 0 chr5 5188830 5188929 -194441221 + MIR SINE MIR 104 207 -55 1726 185 12 0 chr5 5188993 5189339 -194440811 - MLT1B LTR MaLR -40 350 1 281 285 123 37 chr5 5189490 5189865 -194440285 - L1ME4a LINE L1 -65 6056 5650 379 315 27 9 chr5 5189883 5189994 -194440156 + L2 LINE L2 3160 3272 0 1131 178 102 6 chr5 5191965 5192284 -194437866 - MER47B DNA MER2_type 0 418 1 262 361 31 0 chr5 5193142 5193239 -194436911 - MIR SINE MIR -73 135 36 249 299 11 35 chr5 5193908 5193995 -194436155 - MER5B DNA MER1_type -73 105 21 211 313 16 16 chr5 5193938 5194002 -194436148 + MER5A DNA MER1_type 113 176 -13 * 597 219 55 7 chr5 5195294 5195440 -194434710 - MER5A DNA MER1_type -34 155 3 295 160 0 0 chr5 5196336 5196386 -194433764 + MER5A DNA MER1_type 3 52 -137 36 23 0 0 chr5 5196743 5196786 -194433364 + AT_rich Low_complexity Low_complexity 1 43 0 260 311 53 62 chr5 5201911 5202233 -194427917 - L1MEd LINE L1 -5483 636 318 499 168 40 12 chr5 5202704 5202877 -194427273 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 21 36 0 0 chr5 5204222 5204250 -194425900 + AT_rich Low_complexity Low_complexity 1 28 0 611 62 0 0 chr5 5204445 5204525 -194425625 + MADE1 DNA Mariner 1 80 0 526 261 109 32 chr5 5205181 5205584 -194424566 + MLT1J LTR MaLR 1 511 0 343 329 57 14 chr5 5206332 5206472 -194423678 - L2 LINE L2 -1 3312 3167 308 298 56 76 chr5 5207157 5207355 -194422795 - L1ME2 LINE L1 -23 6141 5948 1324 246 39 48 chr5 5207407 5208114 -194422036 - L1ME3A LINE L1 -298 5864 5153 3188 3 0 6 chr5 5208130 5208492 -194421658 - L1PA2 LINE L1 0 6155 5796 390 21 0 0 chr5 5210861 5210908 -194419242 + (CA)n Simple_repeat Simple_repeat 2 48 0 1371 217 37 80 chr5 5214824 5215312 -194414838 - MLT1C LTR MaLR 0 467 1 306 0 0 0 chr5 5215562 5215596 -194414554 + (TG)n Simple_repeat Simple_repeat 1 34 0 1763 103 91 0 chr5 5216074 5216337 -194413813 + AluSx SINE Alu 1 287 -25 472 239 45 30 chr5 5217271 5217405 -194412745 - L2 LINE L2 0 3313 3178 2064 134 0 13 chr5 5217742 5218056 -194412094 - AluSg SINE Alu 0 310 1 181 365 21 21 chr5 5218334 5218430 -194411720 + L2 LINE L2 2589 2684 -630 2811 60 0 0 chr5 5218510 5218863 -194411287 - L1PA8 LINE L1 -3 6169 5817 2505 60 0 19 chr5 5219360 5219675 -194410475 + AluY SINE Alu 1 309 -2 235 102 20 20 chr5 5220866 5220915 -194409235 + (TA)n Simple_repeat Simple_repeat 1 49 0 325 146 8 49 chr5 5220974 5221097 -194409053 + (TA)n Simple_repeat Simple_repeat 1 118 0 396 201 0 50 chr5 5221151 5221330 -194408820 + (TA)n Simple_repeat Simple_repeat 1 170 0 468 172 0 59 chr5 5221354 5221823 -194408327 + (TA)n Simple_repeat Simple_repeat 1 441 0 1591 172 58 3 chr5 5222564 5222855 -194407295 + AluJo SINE Alu 2 308 -4 323 333 32 0 chr5 5223914 5224040 -194406110 + (TATG)n Simple_repeat Simple_repeat 2 131 0 520 250 11 0 chr5 5224042 5224218 -194405932 + (TA)n Simple_repeat Simple_repeat 1 178 0 702 344 4 0 chr5 5224242 5224472 -194405678 - MIR SINE MIR -12 250 20 982 206 54 10 chr5 5224480 5224684 -194405466 - MER20 DNA MER1_type 0 219 7 234 270 119 16 chr5 5224736 5224862 -194405288 - L1ME4a LINE L1 -31 6090 5952 1499 203 3 14 chr5 5224923 5225241 -194404909 - AluJo SINE Alu 0 312 1 21 82 0 0 chr5 5225390 5225439 -194404711 + AT_rich Low_complexity Low_complexity 1 49 0 818 169 19 20 chr5 5225843 5226110 -194404040 + AluJ SINE Alu 7 306 -6 24 32 0 0 chr5 5226149 5226180 -194403970 + AT_rich Low_complexity Low_complexity 1 31 0 261 0 0 0 chr5 5226273 5226302 -194403848 + (TG)n Simple_repeat Simple_repeat 2 30 0 252 59 0 0 chr5 5227198 5227232 -194402918 + (TG)n Simple_repeat Simple_repeat 2 35 0 2595 173 12 12 chr5 5228010 5228276 -194401874 - MSTA LTR MaLR 0 428 160 2440 34 40 7 chr5 5228276 5228574 -194401576 + AluY SINE Alu 1 308 -3 2595 173 12 12 chr5 5228574 5228734 -194401416 - MSTA LTR MaLR -267 161 2 709 250 10 39 chr5 5229443 5229651 -194400499 + MER20 DNA MER1_type 14 215 -4 1913 125 16 13 chr5 5230134 5230439 -194399711 - AluSx SINE Alu -6 306 1 2290 100 0 13 chr5 5230900 5231211 -194398939 + AluSx SINE Alu 1 307 -5 445 331 0 0 chr5 5231473 5231603 -194398547 + GA-rich Low_complexity Low_complexity 2 131 0 207 286 48 36 chr5 5231806 5231890 -194398260 - L2 LINE L2 -20 3252 3168 423 0 0 0 chr5 5232329 5232376 -194397774 + (CA)n Simple_repeat Simple_repeat 2 48 0 23 33 0 0 chr5 5233806 5233836 -194396314 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr5 5234253 5234283 -194395867 + AT_rich Low_complexity Low_complexity 1 30 0 1685 309 68 25 chr5 5234290 5234660 -194395490 + L1MEc LINE L1 297 650 -5746 2209 110 3 10 chr5 5234660 5234968 -194395182 + AluSq SINE Alu 3 308 -5 1685 309 68 25 chr5 5234968 5235605 -194394545 + L1MEc LINE L1 650 1347 -5049 401 285 27 37 chr5 5235767 5235991 -194394159 - L1MCa LINE L1 -894 1893 1511 586 293 86 80 chr5 5236041 5236427 -194393723 + MLT1F1 LTR MaLR 3 390 -152 4880 115 1 0 chr5 5236429 5237090 -194393060 + THE1A-int LTR MaLR 919 1580 0 2557 113 6 8 chr5 5237090 5237444 -194392706 + THE1A LTR MaLR 1 353 -2 420 281 114 33 chr5 5237685 5237895 -194392255 + MIR SINE MIR 6 232 -30 187 356 20 20 chr5 5238309 5238410 -194391740 + MIR3 SINE MIR 65 165 -43 2364 157 3 3 chr5 5238419 5238783 -194391367 + THE1B LTR MaLR 1 364 0 931 276 85 34 chr5 5239977 5240329 -194389821 - MLT1A2 LTR MaLR -4 370 1 22 0 0 0 chr5 5240687 5240709 -194389441 + AT_rich Low_complexity Low_complexity 1 22 0 2352 110 0 0 chr5 5241374 5241684 -194388466 - AluSx SINE Alu -2 310 1 226 228 98 43 chr5 5242091 5242183 -194387967 + MIR SINE MIR 94 190 -72 264 300 31 31 chr5 5244429 5244559 -194385591 - MER5A DNA MER1_type -6 183 54 27 29 0 0 chr5 5244680 5244714 -194385436 + AT_rich Low_complexity Low_complexity 1 34 0 210 37 0 0 chr5 5245760 5245787 -194384363 + (CA)n Simple_repeat Simple_repeat 2 28 0 294 182 58 0 chr5 5245791 5245945 -194384205 + (TA)n Simple_repeat Simple_repeat 2 164 0 1680 175 77 72 chr5 5246111 5246499 -194383651 - MLT1B LTR MaLR 0 390 1 200 91 0 30 chr5 5247652 5247685 -194382465 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 2069 144 7 0 chr5 5248308 5248640 -194381510 + AluSg SINE Alu 1 334 0 1683 175 0 0 chr5 5248640 5248914 -194381236 + MER7A DNA MER2_type 65 336 -10 608 214 27 86 chr5 5250094 5250314 -194379836 + MIR SINE MIR 32 238 -24 224 174 0 22 chr5 5250328 5250374 -194379776 + (TTA)n Simple_repeat Simple_repeat 1 45 0 2094 131 3 0 chr5 5251895 5252192 -194377958 + AluSq SINE Alu 1 298 -15 2265 85 0 33 chr5 5255685 5255990 -194374160 - AluY SINE Alu -16 295 1 1402 127 0 0 chr5 5256032 5256244 -194373906 + AluSg/x SINE Alu 98 309 -3 915 104 7 30 chr5 5256393 5256528 -194373622 - L1PB1 LINE L1 -4 6147 6016 2337 163 5 21 chr5 5257336 5257717 -194372433 - THE1C LTR MaLR 0 375 1 757 231 14 53 chr5 5258197 5258405 -194371745 - MER20 DNA MER1_type -18 201 2 719 262 99 26 chr5 5258433 5258666 -194371484 - MIR SINE MIR -16 246 1 686 311 101 15 chr5 5259066 5259646 -194370504 + L1MC4 LINE L1 6336 7062 -980 2182 128 0 10 chr5 5259730 5260043 -194370107 - AluSx SINE Alu -2 310 1 381 271 62 8 chr5 5260329 5260458 -194369692 + L1MC4a LINE L1 7275 7410 -398 334 243 7 30 chr5 5261812 5262118 -194368032 + GA-rich Low_complexity Low_complexity 1 298 0 29 47 0 0 chr5 5262458 5262501 -194367649 + AT_rich Low_complexity Low_complexity 1 43 0 1874 142 35 0 chr5 5264532 5264821 -194365329 + AluSq SINE Alu 1 299 -14 922 281 29 32 chr5 5265358 5265735 -194364415 + L1MC4a LINE L1 6542 6917 -891 3582 150 47 66 chr5 5266536 5267123 -194363027 - MER50 LTR ERV1 -23 711 139 1994 129 37 0 chr5 5267123 5267418 -194362732 - AluSx SINE Alu -6 306 1 3582 150 47 66 chr5 5267418 5267555 -194362595 - MER50 LTR ERV1 -595 139 1 3582 166 33 24 chr5 5267961 5268893 -194361257 + L1MA4 LINE L1 4647 5606 -694 1994 138 3 0 chr5 5268893 5269182 -194360968 + AluSp SINE Alu 2 291 -22 3582 166 33 24 chr5 5269182 5269523 -194360627 + L1MA4 LINE L1 5606 5943 -357 2188 128 0 0 chr5 5270359 5270656 -194359494 + AluSx SINE Alu 3 299 -13 1317 219 92 73 chr5 5270795 5271079 -194359071 + MER77 LTR ERV1 180 522 -155 1727 149 34 3 chr5 5271079 5271375 -194358775 - AluSx SINE Alu -3 309 5 1317 219 92 73 chr5 5271375 5271530 -194358620 + MER77 LTR ERV1 522 673 -4 1130 261 156 75 chr5 5271642 5272953 -194357197 - HAL1 LINE L1 -1 2506 1090 23 86 0 0 chr5 5272975 5273033 -194357117 + AT_rich Low_complexity Low_complexity 1 58 0 571 277 158 55 chr5 5273112 5273636 -194356514 - HAL1 LINE L1 -1433 1074 497 234 229 330 0 chr5 5273742 5273851 -194356299 - HAL1 LINE L1 -2341 166 22 192 77 0 0 chr5 5275004 5275030 -194355120 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 2480 60 13 3 chr5 5278830 5279130 -194351020 - AluY SINE Alu -8 303 1 631 132 88 0 chr5 5279527 5279641 -194350509 + MSTB LTR MaLR 1 124 -302 32 57 0 0 chr5 5283199 5283252 -194346898 + AT_rich Low_complexity Low_complexity 1 53 0 414 0 0 0 chr5 5283291 5283337 -194346813 + (TG)n Simple_repeat Simple_repeat 2 47 0 1894 169 0 0 chr5 5285193 5285489 -194344661 - AluSx SINE Alu -16 296 1 1654 236 97 39 chr5 5287118 5287257 -194342893 + MLT1F1 LTR MaLR 1 131 -436 1707 196 58 3 chr5 5287257 5287603 -194342547 + MLT1A1 LTR MaLR 1 365 0 1654 236 97 39 chr5 5287603 5287998 -194342152 + MLT1F1 LTR MaLR 131 566 -1 827 329 19 3 chr5 5288008 5288330 -194341820 + L1ME3A LINE L1 5655 5981 -189 743 263 56 5 chr5 5288399 5288612 -194341538 - MER58A DNA MER1_type 0 224 1 279 346 93 33 chr5 5289823 5290222 -194339928 + HsTC2 DNA Tc2 469 891 -1007 197 0 71 0 chr5 5291359 5291387 -194338763 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 22 35 0 0 chr5 5291714 5291743 -194338407 + AT_rich Low_complexity Low_complexity 1 29 0 677 149 11 33 chr5 5291769 5291950 -194338200 + GA-rich Low_complexity Low_complexity 2 178 0 330 93 13 53 chr5 5291950 5292025 -194338125 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 195 184 0 0 chr5 5293311 5293349 -194336801 + CT-rich Low_complexity Low_complexity 2 39 0 345 197 0 0 chr5 5293795 5293871 -194336279 + GA-rich Low_complexity Low_complexity 3 78 0 21 0 0 0 chr5 5295658 5295679 -194334471 + AT_rich Low_complexity Low_complexity 1 21 0 2924 194 28 36 chr5 5296287 5296450 -194333700 + L1MC3 LINE L1 7050 7213 -572 2150 91 13 39 chr5 5296450 5296758 -194333392 - AluY SINE Alu -11 300 1 2924 194 28 36 chr5 5296758 5297208 -194332942 + L1MC3 LINE L1 7213 7658 -127 791 146 0 6 chr5 5298416 5298580 -194331570 + (TG)n Simple_repeat Simple_repeat 2 164 0 249 33 0 0 chr5 5302020 5302050 -194328100 + (T)n Simple_repeat Simple_repeat 1 30 0 2463 53 0 7 chr5 5304685 5304987 -194325163 - AluY SINE Alu -11 300 1 315 0 0 0 chr5 5305503 5305538 -194324612 + (TG)n Simple_repeat Simple_repeat 2 36 0 278 267 0 0 chr5 5305662 5305722 -194324428 + MER63 DNA MER1_type 688 747 -313 229 188 21 0 chr5 5305725 5305773 -194324377 + MER63 DNA MER1_type 978 1026 -35 2624 199 25 12 chr5 5305967 5306455 -194323695 - MER21B LTR ERV1 -369 494 1 189 0 0 0 chr5 5307134 5307155 -194322995 + (CA)n Simple_repeat Simple_repeat 1 21 0 422 330 112 31 chr5 5358352 5358710 -194271440 + L2 LINE L2 231 617 -2697 1099 255 55 16 chr5 5358731 5359188 -194270962 + MLT2B1 LTR ERVL 3 534 -20 419 353 145 22 chr5 5359422 5359878 -194270272 + L2 LINE L2 451 962 -2352 21 104 0 0 chr5 5359906 5359983 -194270167 + AT_rich Low_complexity Low_complexity 1 77 0 324 337 58 5 chr5 5360046 5360251 -194269899 - L1MC4a LINE L1 -1750 6058 5843 1990 155 0 0 chr5 5360251 5360576 -194269574 + AluSx SINE Alu 1 325 0 3102 211 59 22 chr5 5360611 5361528 -194268622 - L1MB2 LINE L1 -45 6126 5174 1451 199 80 0 chr5 5361534 5361896 -194268254 - L1MD3 LINE L1 -173 7822 7432 40138 47 22 2 chr5 5361900 5367930 -194262220 - L1PA2 LINE L1 -4 6151 1 2082 234 63 9 chr5 5367926 5368597 -194261553 - L1MB2 LINE L1 -947 5199 4493 * 285 230 63 40 chr5 5368678 5368804 -194261346 - L1MC4a LINE L1 -2066 5742 5614 1126 71 7 7 chr5 5368856 5369011 -194261139 - L1PB1 LINE L1 -1 6150 5996 421 332 96 32 chr5 5369099 5369845 -194260305 - L1MC4a LINE L1 -946 5200 4377 275 338 37 19 chr5 5370129 5370452 -194259698 + L1M4 LINE L1 3733 4061 -2085 3181 254 65 31 chr5 5371910 5372454 -194257696 - L1M4 LINE L1 -1471 4675 4151 1070 260 109 60 chr5 5372454 5373051 -194257099 + MLT1E2 LTR MaLR 1 626 0 3181 254 65 31 chr5 5373051 5374359 -194255791 - L1M4 LINE L1 -1995 4151 2760 206 347 0 0 chr5 5375616 5375691 -194254459 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 209 30 61 0 chr5 5376728 5376761 -194253389 + (CAGA)n Simple_repeat Simple_repeat 1 35 0 306 0 0 0 chr5 5381873 5381907 -194248243 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 216 198 45 chr5 5381958 5382069 -194248081 - MIR SINE MIR -71 191 64 350 306 32 8 chr5 5382083 5382207 -194247943 + MIR SINE MIR 13 139 -123 186 191 0 0 chr5 5382358 5382400 -194247750 + CT-rich Low_complexity Low_complexity 2 43 0 401 145 13 0 chr5 5382436 5382512 -194247638 + CT-rich Low_complexity Low_complexity 3 79 0 186 133 0 0 chr5 5382689 5382719 -194247431 + (T)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr5 5383630 5383652 -194246498 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 5387068 5387089 -194243061 + AT_rich Low_complexity Low_complexity 1 21 0 21 82 0 0 chr5 5387460 5387509 -194242641 + AT_rich Low_complexity Low_complexity 1 49 0 1292 177 0 57 chr5 5387662 5387910 -194242240 + AluSq SINE Alu 1 234 -79 254 299 52 31 chr5 5388152 5388249 -194241901 - L2 LINE L2 -15 3298 3200 275 244 13 13 chr5 5388513 5388591 -194241559 + MIR SINE MIR 156 233 -29 304 262 52 95 chr5 5388695 5389000 -194241150 - L2 LINE L2 -640 2674 2383 239 291 145 37 chr5 5389962 5390258 -194239892 - MLT1J1 LTR MaLR -41 405 78 22 35 0 0 chr5 5391158 5391187 -194238963 + AT_rich Low_complexity Low_complexity 1 29 0 2315 105 3 0 chr5 5391309 5391605 -194238545 + AluSp SINE Alu 1 297 -16 320 298 65 48 chr5 5391698 5392098 -194238052 + L1M4 LINE L1 4513 4919 -1227 2920 91 3 0 chr5 5392188 5392551 -194237599 + THE1B LTR MaLR 1 364 0 270 212 9 88 chr5 5392910 5393023 -194237127 + L1M LINE L1 5326 5429 -2379 197 265 59 15 chr5 5393089 5393157 -194236993 - L2 LINE L2 0 3313 3243 24 77 0 0 chr5 5393444 5393496 -194236654 + AT_rich Low_complexity Low_complexity 1 52 0 24 67 0 0 chr5 5395084 5395129 -194235021 + AT_rich Low_complexity Low_complexity 1 45 0 23 68 0 0 chr5 5396102 5396146 -194234004 + AT_rich Low_complexity Low_complexity 1 44 0 203 0 37 0 chr5 5397244 5397271 -194232879 + (TG)n Simple_repeat Simple_repeat 1 28 0 2143 159 85 10 chr5 5400087 5400477 -194229673 - MSTA LTR MaLR 0 428 10 1900 195 34 6 chr5 5400629 5400978 -194229172 + MLT1A1 LTR MaLR 7 365 0 1158 233 131 23 chr5 5401078 5401484 -194228666 + MLT1C LTR MaLR 1 446 -11 967 318 23 8 chr5 5401493 5401845 -194228305 + ERVL LTR ERVL 830 1186 -3810 866 259 63 22 chr5 5402202 5402519 -194227631 + ERVL LTR ERVL 1675 2004 -2992 446 291 58 39 chr5 5402548 5402754 -194227396 + LTR1B LTR ERV1 39 248 -578 570 249 65 6 chr5 5402793 5402962 -194227188 + LTR28 LTR ERV1 396 574 -446 229 242 20 141 chr5 5402974 5403123 -194227027 + LTR28 LTR ERV1 848 978 -42 1187 345 28 13 chr5 5403169 5403772 -194226378 + ERVL LTR ERVL 2029 2640 -3014 420 365 14 0 chr5 5403820 5403965 -194226185 + ERVL LTR ERVL 2713 2859 -2137 323 292 44 9 chr5 5404008 5404121 -194226029 + ERVL LTR ERVL 2937 3053 -1943 290 312 49 28 chr5 5404255 5404502 -194225648 + ERVL LTR ERVL 3288 3539 -2225 569 332 80 44 chr5 5404539 5405516 -194224634 + ERVL LTR ERVL 3275 4610 -1154 273 319 9 0 chr5 5406120 5406236 -194223914 + LTR16A LTR ERVL 256 372 -78 276 284 121 21 chr5 5406788 5406929 -194223221 - MIR SINE MIR -86 176 22 273 283 33 33 chr5 5412430 5412522 -194217628 + GA-rich Low_complexity Low_complexity 4 95 0 1342 234 62 9 chr5 5413308 5413645 -194216505 + MLT1A1 LTR MaLR 11 365 0 243 333 24 0 chr5 5414104 5414188 -194215962 - L2 LINE L2 -4 3309 3224 343 322 54 20 chr5 5414405 5414554 -194215596 - L2 LINE L2 -250 3063 2910 181 306 85 45 chr5 5415103 5415302 -194214848 - L2 LINE L2 -416 2898 2692 21 0 0 0 chr5 5415378 5415399 -194214751 + AT_rich Low_complexity Low_complexity 1 21 0 195 291 154 62 chr5 5415638 5416061 -194214089 - L2 LINE L2 -475 2839 2378 5336 177 23 11 chr5 5416165 5417390 -194212760 + L1MA4 LINE L1 5062 6300 0 1688 187 31 48 chr5 5417448 5417532 -194212618 + MER7A DNA MER2_type 2 86 -2952 1907 119 50 11 chr5 5417532 5417809 -194212341 - AluSx SINE Alu -24 288 1 1688 187 31 48 chr5 5417809 5418077 -194212073 + MER7A DNA MER2_type 86 346 0 479 237 26 103 chr5 5418444 5418676 -194211474 - MLT1I LTR MaLR 0 409 196 1915 77 0 104 chr5 5419114 5419441 -194210709 - L1P LINE L1 -921 5225 4933 26 30 0 0 chr5 5422231 5422264 -194207886 + AT_rich Low_complexity Low_complexity 1 33 0 341 266 28 9 chr5 5423930 5424039 -194206111 - L1MC4 LINE L1 -134 7908 7798 269 333 123 49 chr5 5424563 5424806 -194205344 + L2 LINE L2 3053 3313 0 356 360 114 24 chr5 5425241 5425979 -194204171 - L1M4 LINE L1 -2969 3177 2374 202 282 0 0 chr5 5426102 5426173 -194203977 + A-rich Low_complexity Low_complexity 1 71 0 186 143 0 0 chr5 5426205 5426240 -194203910 + (CA)n Simple_repeat Simple_repeat 2 36 0 1502 214 3 28 chr5 5426458 5426775 -194203375 + AluJb SINE Alu 1 309 -3 300 281 133 56 chr5 5427301 5427497 -194202653 + L1MC4a LINE L1 5783 5993 -1815 1793 186 0 0 chr5 5427621 5427901 -194202249 - AluJb SINE Alu -20 292 13 247 308 97 43 chr5 5428004 5428446 -194201704 + L1MC4a LINE L1 6219 6684 -1124 12176 207 48 15 chr5 5428564 5429303 -194200847 + L1M1 LINE L1 16 729 -6927 180 77 0 0 chr5 5429303 5429329 -194200821 + (TAA)n Simple_repeat Simple_repeat 2 27 0 12176 207 48 15 chr5 5429329 5433800 -194196350 + L1M1 LINE L1 729 6913 -743 369 221 59 22 chr5 5434082 5434218 -194195932 + L1MC4 LINE L1 7110 7250 -792 217 158 26 0 chr5 5435407 5435445 -194194705 + (TG)n Simple_repeat Simple_repeat 2 40 0 301 276 76 9 chr5 5436675 5436780 -194193370 - MIR3 SINE MIR -12 196 85 1129 260 123 20 chr5 5437536 5437586 -194192564 + L1MD3 LINE L1 6550 6593 -1265 273 29 0 0 chr5 5437586 5437620 -194192530 + (CA)n Simple_repeat Simple_repeat 1 34 0 1129 260 123 20 chr5 5437620 5438200 -194191950 + L1MD3 LINE L1 6593 7275 -583 481 227 47 0 chr5 5438204 5438332 -194191818 + MLT1F1 LTR MaLR 2 135 -432 21 0 0 0 chr5 5438861 5438882 -194191268 + AT_rich Low_complexity Low_complexity 1 21 0 2560 45 0 10 chr5 5439002 5439315 -194190835 - AluY SINE Alu -1 310 1 272 306 0 9 chr5 5439650 5439761 -194190389 + (CTA)n Simple_repeat Simple_repeat 1 110 0 519 155 0 0 chr5 5439766 5439869 -194190281 + (CCA)n Simple_repeat Simple_repeat 1 103 0 541 263 23 0 chr5 5439912 5440045 -194190105 + MER45A DNA AcHobo 3 138 -40 237 227 91 15 chr5 5440045 5440111 -194190039 - L1MCa LINE L1 -6330 96 26 194 0 0 37 chr5 5443147 5443174 -194186976 + (TTA)n Simple_repeat Simple_repeat 2 27 0 417 45 5 119 chr5 5444375 5444577 -194185573 + (TA)n Simple_repeat Simple_repeat 1 179 0 282 77 15 77 chr5 5444602 5444732 -194185418 + (TA)n Simple_repeat Simple_repeat 1 122 0 189 0 0 0 chr5 5446320 5446341 -194183809 + (CA)n Simple_repeat Simple_repeat 1 21 0 384 313 0 11 chr5 5446361 5446540 -194183610 + (CA)n Simple_repeat Simple_repeat 2 178 0 344 341 0 6 chr5 5446600 5446767 -194183383 + (CA)n Simple_repeat Simple_repeat 1 166 0 275 294 26 3 chr5 5447695 5447826 -194182324 - MIR SINE MIR -62 146 13 190 356 70 9 chr5 5447916 5448031 -194182119 - MIR3 SINE MIR -2 206 85 546 146 188 48 chr5 5449357 5449522 -194180628 - MER4A LTR ERV1 -1 464 277 2000 125 8 55 chr5 5449540 5450024 -194180126 - MER4A LTR ERV1 -241 423 1 1273 213 47 18 chr5 5450734 5451072 -194179078 + MLT2D LTR ERVL 7 354 -60 200 234 0 16 chr5 5451157 5451221 -194178929 + (CATATA)n Simple_repeat Simple_repeat 6 68 0 264 130 0 0 chr5 5451234 5451280 -194178870 + (CA)n Simple_repeat Simple_repeat 1 46 0 1533 160 110 22 chr5 5451286 5451605 -194178545 + MER7A DNA MER2_type 1 345 -1 276 111 0 0 chr5 5451605 5451650 -194178500 + (TC)n Simple_repeat Simple_repeat 1 45 0 977 200 53 12 chr5 5452379 5452735 -194177415 + MLT2B3 LTR ERVL 183 554 0 384 260 60 7 chr5 5452815 5452965 -194177185 - MER106B DNA MER1_type -4 1055 898 288 67 22 0 chr5 5453732 5453777 -194176373 - MADE1 DNA Mariner -34 46 1 254 357 31 10 chr5 5455619 5455717 -194174433 - MIR SINE MIR -115 147 48 1388 175 0 0 chr5 5457220 5457437 -194172713 + AluSx SINE Alu 6 222 -90 486 0 0 0 chr5 5457443 5457497 -194172653 + (TAA)n Simple_repeat Simple_repeat 3 56 0 751 253 52 18 chr5 5457497 5457884 -194172266 - L1M4 LINE L1 -2840 4117 3718 2235 104 13 10 chr5 5458457 5458765 -194171385 + AluSx SINE Alu 1 309 -3 602 216 36 18 chr5 5458929 5459151 -194170999 + L1M4 LINE L1 2996 3221 -2925 2025 146 123 5 chr5 5459349 5459732 -194170418 - MSTA LTR MaLR 0 428 1 716 328 123 5 chr5 5459750 5460155 -194169995 - L1M4 LINE L1 -6071 788 336 1805 142 178 8 chr5 5460205 5460571 -194169579 + MSTA LTR MaLR 1 428 0 6009 163 21 42 chr5 5460573 5461783 -194168367 + MSTA-int LTR MaLR 3 1187 -393 1566 200 14 19 chr5 5462341 5462701 -194167449 - L1MD1 LINE L1 -3 6239 5882 2161 113 0 12 chr5 5462737 5463083 -194167067 + L1PB1 LINE L1 5438 5779 -372 554 41 14 0 chr5 5463084 5463157 -194166993 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 552 192 17 0 chr5 5463157 5463277 -194166873 - L1MD1 LINE L1 -45 6197 6076 408 20 0 0 chr5 5463285 5463334 -194166816 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 2089 128 48 0 chr5 5463334 5463669 -194166481 + L1PB1 LINE L1 5799 6149 -2 427 233 166 38 chr5 5463691 5464190 -194165960 + Charlie2 DNA MER1_type 2276 2838 -24 1235 219 26 89 chr5 5465424 5465514 -194164636 + MLT1B LTR MaLR 1 95 -295 2116 149 16 19 chr5 5465514 5465890 -194164260 + THE1C LTR MaLR 1 375 0 1235 219 26 89 chr5 5465890 5466215 -194163935 + MLT1B LTR MaLR 95 390 0 1715 189 0 0 chr5 5466960 5467251 -194162899 - AluJb SINE Alu -21 291 1 782 267 84 28 chr5 5468270 5468340 -194161810 - LTR52 LTR ERVL -3 418 353 444 51 0 0 chr5 5468340 5468399 -194161751 + (CA)n Simple_repeat Simple_repeat 2 60 0 782 267 84 28 chr5 5468399 5468721 -194161429 - LTR52 LTR ERVL -68 353 4 1469 233 20 7 chr5 5470457 5470860 -194159290 - L1MD1 LINE L1 0 6242 5835 895 198 28 75 chr5 5470863 5471222 -194158928 - L1MDa LINE L1 -4767 1773 1432 399 106 0 0 chr5 5471333 5471399 -194158751 + (TG)n Simple_repeat Simple_repeat 1 66 0 11736 186 2 0 chr5 5471697 5475129 -194155021 + L1PA14 LINE L1 2766 6160 -1 2371 72 0 0 chr5 5475768 5476059 -194154091 - AluY SINE Alu -20 291 1 378 306 69 43 chr5 5478697 5478929 -194151221 - MIR SINE MIR -16 246 9 1711 248 46 36 chr5 5479274 5479798 -194150352 - MER65B LTR ERV1 0 531 3 1834 233 80 19 chr5 5479924 5480400 -194149750 - MLT1D LTR MaLR 0 505 1 326 201 136 82 chr5 5480539 5480723 -194149427 + L1MB3 LINE L1 3580 3773 -2373 43662 31 25 1 chr5 5480771 5486779 -194143371 + L1PA2 LINE L1 3 6155 0 343 260 64 87 chr5 5486779 5486952 -194143198 + L1MB3 LINE L1 3842 4010 -2136 319 264 31 54 chr5 5486959 5487088 -194143062 + L1MB3 LINE L1 5308 5433 -2375 545 128 21 11 chr5 5487431 5487525 -194142625 + L1PA14 LINE L1 6066 6160 -1 333 358 65 20 chr5 5487760 5488101 -194142049 + L1M4 LINE L1 3965 4320 -1826 6348 175 56 58 chr5 5488153 5490321 -194139829 + L1M4c LINE L1 391 2656 -3726 805 225 110 23 chr5 5490335 5490553 -194139597 + L1MB3 LINE L1 5929 6165 -18 303 180 0 0 chr5 5490574 5490624 -194139526 - MLT1C LTR MaLR -59 408 359 789 249 100 33 chr5 5491069 5491398 -194138752 - MLT1C LTR MaLR -116 351 1 436 269 159 16 chr5 5491407 5491563 -194138587 - MIR SINE MIR -58 150 16 223 217 22 0 chr5 5493173 5493219 -194136931 + GA-rich Low_complexity Low_complexity 2 48 0 249 331 39 62 chr5 5494936 5495066 -194135084 - L2 LINE L2 -5 3308 3182 1130 281 19 11 chr5 5495316 5495683 -194134467 - MER63B DNA MER1_type -66 370 1 2609 29 0 16 chr5 5495841 5496157 -194133993 - AluY SINE Alu 0 311 1 2911 91 18 2 chr5 5497990 5498384 -194131766 - L1PA10 LINE L1 0 6168 5769 22 0 0 0 chr5 5500707 5500729 -194129421 + AT_rich Low_complexity Low_complexity 1 22 0 24 91 0 0 chr5 5501127 5501193 -194128957 + AT_rich Low_complexity Low_complexity 1 66 0 189 0 0 0 chr5 5503115 5503136 -194127014 + (A)n Simple_repeat Simple_repeat 1 21 0 225 65 0 0 chr5 5503172 5503203 -194126947 + (TC)n Simple_repeat Simple_repeat 2 32 0 255 31 0 0 chr5 5503203 5503235 -194126915 + (CA)n Simple_repeat Simple_repeat 1 32 0 469 160 30 8 chr5 5506780 5506911 -194123239 + (TA)n Simple_repeat Simple_repeat 2 135 0 2260 105 0 3 chr5 5507361 5507667 -194122483 + AluSg SINE Alu 1 305 -5 282 29 0 0 chr5 5507750 5507785 -194122365 + (TG)n Simple_repeat Simple_repeat 2 36 0 1530 149 65 68 chr5 5508498 5508853 -194121297 - MLT1A2 LTR MaLR -20 354 1 25 0 0 0 chr5 5508960 5508985 -194121165 + AT_rich Low_complexity Low_complexity 1 25 0 3004 127 7 7 chr5 5509927 5510361 -194119789 - MER57B LTR ERV1 0 434 1 436 174 51 14 chr5 5510982 5511120 -194119030 + CT-rich Low_complexity Low_complexity 4 146 0 1783 158 35 0 chr5 5511125 5511409 -194118741 - AluJb SINE Alu -8 304 11 209 77 51 0 chr5 5511703 5511742 -194118408 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 1049 250 28 0 chr5 5511830 5512082 -194118068 + L1ME3 LINE L1 5896 6154 -8 245 196 0 0 chr5 5512797 5512843 -194117307 - L2 LINE L2 -4 3309 3264 732 316 5 5 chr5 5513113 5513331 -194116819 - MIR SINE MIR -42 220 3 813 277 81 63 chr5 5513809 5514339 -194115811 + MLT1F1 LTR MaLR 18 559 -8 241 275 154 0 chr5 5514854 5514945 -194115205 - L2 LINE L2 -5 3308 3204 195 111 0 0 chr5 5514991 5515018 -194115132 - L2 LINE L2 -22 3250 3224 225 378 43 0 chr5 5515038 5515145 -194115005 - MIR SINE MIR -48 160 45 355 294 86 37 chr5 5516499 5516686 -194113464 + MIR SINE MIR 65 260 -2 1806 132 189 35 chr5 5517030 5517401 -194112749 + MSTA LTR MaLR 1 428 0 886 258 30 17 chr5 5517844 5518143 -194112007 - L1M4 LINE L1 -5309 1233 931 1533 175 62 31 chr5 5518982 5519336 -194110814 - MLT1A1 LTR MaLR 0 365 1 5941 116 19 2 chr5 5520372 5521253 -194108897 - THE1A-int LTR MaLR -684 896 1 2155 130 11 26 chr5 5521253 5521600 -194108550 - THE1A LTR MaLR 0 355 14 1343 185 181 0 chr5 5521774 5521881 -194108269 + AluSx SINE Alu 3 89 -213 396 0 0 0 chr5 5521881 5521925 -194108225 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1343 185 181 0 chr5 5521925 5522071 -194108079 + AluSx SINE Alu 89 302 0 1907 208 75 23 chr5 5522313 5522793 -194107357 - MLT1D LTR MaLR 0 505 1 318 329 106 29 chr5 5522958 5523308 -194106842 - L2 LINE L2 -341 2973 2597 1424 186 0 40 chr5 5523722 5524023 -194106127 + L1MA9 LINE L1 6024 6312 0 265 208 0 0 chr5 5527156 5527209 -194102941 - MIR SINE MIR -32 230 178 347 288 28 79 chr5 5529235 5529450 -194100700 - MIR SINE MIR -56 206 3 203 133 0 0 chr5 5530103 5530133 -194100017 + (GAAAA)n Simple_repeat Simple_repeat 4 33 0 14554 142 26 110 chr5 5580444 5583885 -194046265 + L1PA7 LINE L1 1 3152 -2994 735 107 9 0 chr5 5583918 5584030 -194046120 - L1P LINE L1 -1385 4761 4649 14978 101 3 0 chr5 5584030 5587033 -194043117 + L1PA7 LINE L1 3129 6141 -13 195 42 0 0 chr5 5587037 5587061 -194043089 + (TAA)n Simple_repeat Simple_repeat 2 25 0 180 318 53 53 chr5 5589401 5589533 -194040617 + L2 LINE L2 3159 3290 -23 2217 189 25 7 chr5 5589534 5589978 -194040172 - MER66A LTR ERV1 0 478 27 197 397 13 0 chr5 5591271 5591349 -194038801 - MIR SINE MIR -164 98 20 975 295 54 28 chr5 5591742 5592241 -194037909 + L2 LINE L2 2157 2668 -646 2525 127 6 0 chr5 5592287 5592649 -194037501 - THE1B LTR MaLR 0 364 1 219 402 0 0 chr5 5596136 5596228 -194033922 + MIR SINE MIR 99 190 -72 186 133 0 0 chr5 5597731 5597761 -194032389 + (CA)n Simple_repeat Simple_repeat 2 31 0 1960 184 123 2 chr5 5598670 5599099 -194031051 - L1MC3 LINE L1 -9 7776 7296 1049 257 56 51 chr5 5599105 5599558 -194030592 + MLT1C LTR MaLR 1 457 -10 1405 212 41 132 chr5 5599567 5600255 -194029895 - L1MC3 LINE L1 -486 7299 6675 247 267 56 11 chr5 5600258 5600348 -194029802 + MIR SINE MIR 66 159 -103 202 284 181 8 chr5 5601196 5601323 -194028827 + MIR SINE MIR 103 251 -11 248 295 93 23 chr5 5601470 5601599 -194028551 - MIR SINE MIR -17 245 108 1673 168 31 25 chr5 5602123 5602491 -194027659 + Charlie3 DNA MER1_type 1 2712 0 1631 228 35 68 chr5 5602506 5602577 -194027573 - MLT1C LTR MaLR 0 467 395 540 198 112 9 chr5 5602577 5602693 -194027457 + FLAM_A SINE Alu 5 132 -1 1631 228 35 68 chr5 5602693 5603104 -194027046 - MLT1C LTR MaLR -72 395 1 184 328 0 16 chr5 5604143 5604204 -194025946 - MIR SINE MIR -75 133 74 1468 248 85 25 chr5 5608875 5609310 -194020840 - MLT1F LTR MaLR 0 542 82 2472 64 0 0 chr5 5609825 5610121 -194020029 - AluY SINE Alu -15 296 1 237 196 0 0 chr5 5610709 5610760 -194019390 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 4083 158 20 4 chr5 5611965 5612672 -194017478 + L1PA16 LINE L1 5444 6161 -5 248 180 0 0 chr5 5613420 5613470 -194016680 - L1MA10 LINE L1 -3 6331 6282 1998 142 3 6 chr5 5613488 5613839 -194016311 + AluSq SINE Alu 1 350 0 9497 193 56 20 chr5 5613887 5616517 -194013633 - L1M1 LINE L1 -642 5658 2920 40 37 0 0 chr5 5616571 5616625 -194013525 + AT_rich Low_complexity Low_complexity 1 54 0 653 263 38 19 chr5 5616677 5616943 -194013207 - L1MEc LINE L1 -918 5297 5027 1255 202 27 12 chr5 5616990 5617247 -194012903 - MLT1B LTR MaLR 0 390 130 2099 283 49 33 chr5 5617265 5618272 -194011878 - L1MEc LINE L1 -1802 4413 3391 1388 130 5 0 chr5 5618388 5618588 -194011562 + AluSp SINE Alu 108 308 -5 1639 262 61 44 chr5 5619189 5619360 -194010790 - L1MEc LINE L1 -3666 2549 2382 2056 100 60 0 chr5 5619360 5619641 -194010509 + AluSq SINE Alu 1 298 -15 1639 262 61 44 chr5 5619641 5619702 -194010448 - L1MEc LINE L1 -3833 2382 2324 453 146 9 36 chr5 5619702 5619812 -194010338 - L1MA9 LINE L1 -4 6308 6202 1639 262 61 44 chr5 5619812 5620478 -194009672 - L1MEc LINE L1 -3891 2324 1670 840 105 0 0 chr5 5620530 5620644 -194009506 - THE1A LTR MaLR -241 114 1 2479 85 9 0 chr5 5620685 5621013 -194009137 - THE1A LTR MaLR -24 331 1 11241 100 12 2 chr5 5621013 5622097 -194008053 - THE1A-int LTR MaLR 0 1580 474 225 0 0 0 chr5 5622097 5622122 -194008028 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 11241 100 12 2 chr5 5622122 5622601 -194007549 - THE1A-int LTR MaLR -1106 474 1 2586 99 8 0 chr5 5622601 5622953 -194007197 - THE1A LTR MaLR 0 355 1 697 280 45 48 chr5 5623007 5623590 -194006560 - L1MEc LINE L1 -4816 1580 1000 1168 237 20 4 chr5 5623619 5624060 -194006090 - L1MC3 LINE L1 -47 8156 7623 568 207 67 0 chr5 5624090 5624240 -194005910 - L1MC3 LINE L1 -681 7522 7363 282 106 21 0 chr5 5624243 5624290 -194005860 + L1MA9 LINE L1 6264 6311 -1 263 143 0 100 chr5 5624313 5624383 -194005767 - L1MC3 LINE L1 -846 7357 7295 198 71 0 0 chr5 5624389 5624417 -194005733 + (TG)n Simple_repeat Simple_repeat 2 29 0 1461 221 98 51 chr5 5624428 5624895 -194005255 + MLT1D LTR MaLR 17 505 0 5452 227 65 16 chr5 5624896 5625299 -194004851 - L1MC3 LINE L1 -743 5821 5439 282 116 0 0 chr5 5625299 5625342 -194004808 + (TG)n Simple_repeat Simple_repeat 2 44 0 5452 227 65 16 chr5 5625342 5626220 -194003930 - L1MC3 LINE L1 -1125 5439 5829 201 74 0 0 chr5 5626220 5626247 -194003903 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 5452 227 65 16 chr5 5626247 5626885 -194003265 - L1MC3 LINE L1 -734 5830 5225 275 130 65 11 chr5 5626887 5626979 -194003171 + (TA)n Simple_repeat Simple_repeat 2 98 0 198 50 75 0 chr5 5627012 5627052 -194003098 + (TA)n Simple_repeat Simple_repeat 1 43 0 872 299 63 0 chr5 5627052 5627416 -194002734 - L1MC3 LINE L1 -2032 4532 4146 2174 279 63 21 chr5 5627429 5628594 -194001556 - L1MC3 LINE L1 -2619 3945 2732 1368 286 65 19 chr5 5628839 5629826 -194000324 - L1M4 LINE L1 -2801 3345 2314 939 259 128 34 chr5 5629912 5630294 -193999856 - L1MC3 LINE L1 -5616 429 12 792 281 79 76 chr5 5630321 5630902 -193999248 - L1MEc LINE L1 -5454 942 360 717 268 80 23 chr5 5630940 5631294 -193998856 - MER57A LTR ERV1 -14 411 69 986 339 37 55 chr5 5631343 5632008 -193998142 - MER57A-int LTR ERV1 -386 7151 6505 2137 112 3 7 chr5 5632008 5632304 -193997846 - AluSg SINE Alu -15 295 1 986 339 37 55 chr5 5632304 5632574 -193997576 - MER57A-int LTR ERV1 -1032 6505 6232 1053 236 14 82 chr5 5633046 5633450 -193996700 - MER57A-int LTR ERV1 -1357 6180 5830 390 196 33 22 chr5 5634108 5634200 -193995950 - Alu SINE Alu -7 293 201 1077 192 30 44 chr5 5634200 5634508 -193995642 - MER57A-int LTR ERV1 -1587 4744 4643 404 266 37 27 chr5 5634583 5634771 -193995379 - MER57A-int LTR ERV1 -2290 2646 2457 * 602 208 26 106 chr5 5634743 5634839 -193995311 - MER57A-int LTR ERV1 -2550 2573 2471 378 0 0 0 chr5 5634839 5634881 -193995269 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1853 168 0 0 chr5 5634885 5635159 -193994991 - AluSx SINE Alu -28 284 11 602 208 26 106 chr5 5635159 5635321 -193994829 - MER57A-int LTR ERV1 -2655 2468 2331 234 0 0 0 chr5 5635479 5635505 -193994645 + (TA)n Simple_repeat Simple_repeat 2 27 0 4474 41 3 3 chr5 5635641 5636183 -193993967 + L1PA4 LINE L1 3098 3642 -2504 6504 31 4 0 chr5 5636183 5636949 -193993201 + L1PA4 LINE L1 5383 6155 0 4474 41 3 3 chr5 5636949 5636973 -193993177 + L1PA4 LINE L1 3641 3664 -2482 893 224 110 24 chr5 5637003 5637386 -193992764 - MER57A-int LTR ERV1 -3481 1455 1040 378 258 45 15 chr5 5637442 5637574 -193992576 - MER57A-int LTR ERV1 -4510 426 291 850 246 97 8 chr5 5638437 5638685 -193991465 - MER57A LTR ERV1 -2 401 132 524 300 22 11 chr5 5638813 5638993 -193991157 - L1MEc LINE L1 -6055 341 160 414 0 0 0 chr5 5638993 5639039 -193991111 + (TG)n Simple_repeat Simple_repeat 1 46 0 1889 141 14 4 chr5 5639039 5639316 -193990834 - AluSq SINE Alu -33 280 1 1266 168 39 0 chr5 5639319 5639551 -193990599 - L1MB3 LINE L1 -279 5904 5664 196 214 0 24 chr5 5639571 5639613 -193990537 - MER5A DNA MER1_type -1 188 148 1033 154 0 6 chr5 5639613 5639788 -193990362 + L1P LINE L1 4586 4759 -1387 536 217 70 0 chr5 5639787 5639916 -193990234 - L1MEc LINE L1 -6223 173 36 * 1147 230 34 73 chr5 5640573 5640956 -193989194 + MLT1A2 LTR MaLR 1 368 -6 2484 129 6 3 chr5 5642705 5643068 -193987082 + THE1B LTR MaLR 1 364 0 7608 27 0 1 chr5 5643515 5644620 -193985530 + L1PA3 LINE L1 5073 6152 -3 390 271 100 29 chr5 5644642 5644812 -193985338 - L1ME1 LINE L1 -74 6092 5911 261 83 0 0 chr5 5644819 5644855 -193985295 + (A)n Simple_repeat Simple_repeat 1 36 0 498 212 10 0 chr5 5645661 5645760 -193984390 + MER94 DNA DNA 2 101 -33 2780 13 0 0 chr5 5647344 5647647 -193982503 - AluYa5 SINE Alu -8 303 1 23 0 0 0 chr5 5647862 5647885 -193982265 + AT_rich Low_complexity Low_complexity 1 23 0 1992 131 0 42 chr5 5650814 5650867 -193979283 - L1P4 LINE L1 -437 5731 5677 2457 65 7 10 chr5 5650867 5651176 -193978974 - AluY SINE Alu 0 311 4 1992 131 0 42 chr5 5651176 5651458 -193978692 - L1P4 LINE L1 -491 5677 5410 * 2305 127 50 21 chr5 5651455 5651664 -193978486 + L1PA13 LINE L1 5725 5927 -236 2366 75 0 3 chr5 5651664 5651956 -193978194 + AluY SINE Alu 12 302 -9 2305 127 50 21 chr5 5651956 5652170 -193977980 + L1PA13 LINE L1 5927 6160 -3 23 33 0 0 chr5 5652763 5652793 -193977357 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 5653660 5653681 -193976469 + AT_rich Low_complexity Low_complexity 1 21 0 1106 171 0 0 chr5 5654895 5655076 -193975074 - AluJb SINE Alu -3 309 129 6391 96 0 0 chr5 5655076 5656033 -193974117 - L1PA10 LINE L1 -9 6159 5200 251 277 30 0 chr5 5656338 5656439 -193973711 + ERVL LTR ERVL 3162 3265 -1731 1877 159 26 34 chr5 5656623 5657001 -193973149 - THE1C LTR MaLR 0 375 1 2108 145 34 8 chr5 5657130 5657481 -193972669 - THE1C LTR MaLR -15 360 1 783 337 52 30 chr5 5657538 5658096 -193972054 + ERVL LTR ERVL 4032 4640 -1053 1071 282 63 11 chr5 5658395 5659149 -193971001 + L1MC2 LINE L1 1230 2217 -4390 4093 49 8 0 chr5 5659154 5659668 -193970482 + L1PA5 LINE L1 5636 6153 -1 253 190 0 0 chr5 5659865 5659923 -193970227 + L1MC2 LINE L1 3135 3192 -3234 3026 147 18 110 chr5 5659942 5660686 -193969464 + L1MA7 LINE L1 5595 6269 -22 5374 238 61 51 chr5 5660696 5664080 -193966070 + L1MC2 LINE L1 3195 6612 -12 368 298 81 44 chr5 5664396 5664999 -193965151 + L1MEd LINE L1 708 1383 -4927 2332 66 0 3 chr5 5664999 5665286 -193964864 + AluY SINE Alu 21 306 -5 368 298 81 44 chr5 5665286 5665536 -193964614 + L1MEd LINE L1 1383 1622 -4688 754 285 64 13 chr5 5665545 5665938 -193964212 + L1M4 LINE L1 4178 4590 -1556 526 248 47 97 chr5 5666102 5666146 -193964004 - L1MC/D LINE L1 -461 5723 5678 2167 116 3 0 chr5 5666146 5666449 -193963701 + AluSx SINE Alu 3 306 -6 526 248 47 97 chr5 5666449 5666638 -193963512 - L1MC/D LINE L1 -506 5678 5508 236 269 2 30 chr5 5666665 5666771 -193963379 - L1MC/D LINE L1 -701 5420 5318 * 254 252 86 7 chr5 5666766 5666905 -193963245 - L1MC/D LINE L1 -1631 4515 4366 440 327 101 19 chr5 5667308 5667904 -193962246 - L1M4 LINE L1 -1309 4837 4193 434 288 70 77 chr5 5668806 5669224 -193960926 + MLT1J LTR MaLR 6 501 -10 292 324 89 11 chr5 5669334 5669513 -193960637 - HAL1b LINE L1 -909 439 247 1442 184 7 47 chr5 5670757 5671056 -193959094 - AluJb SINE Alu -25 287 1 974 217 46 11 chr5 5671141 5671422 -193958728 - MER45R DNA AcHobo 0 1581 1291 712 256 103 38 chr5 5671421 5671819 -193958331 - MER45B DNA AcHobo -616 424 3 * 215 226 170 0 chr5 5672192 5672245 -193957905 - L2 LINE L2 -25 3247 3186 1135 36 0 0 chr5 5672497 5672634 -193957516 + L1PA5 LINE L1 6018 6154 0 430 374 40 34 chr5 5672991 5673312 -193956838 - L2 LINE L2 -667 2647 2325 2075 137 42 28 chr5 5673588 5673947 -193956203 + THE1B LTR MaLR 1 364 0 186 375 0 0 chr5 5674304 5674368 -193955782 + L2 LINE L2 2911 2974 -298 328 298 89 0 chr5 5674907 5675031 -193955119 + L2 LINE L2 3179 3313 0 227 203 17 0 chr5 5675325 5675384 -193954766 + GA-rich Low_complexity Low_complexity 1 60 0 2270 60 0 0 chr5 5678187 5678468 -193951682 + L1PA7 LINE L1 5866 6146 -8 192 152 0 0 chr5 5678899 5678932 -193951218 + CT-rich Low_complexity Low_complexity 3 35 0 357 134 12 24 chr5 5678978 5679060 -193951090 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 27 0 0 0 chr5 5679741 5679768 -193950382 + AT_rich Low_complexity Low_complexity 1 27 0 532 286 93 35 chr5 5680199 5680793 -193949357 - L1MEc LINE L1 -4730 1666 1039 23 33 0 0 chr5 5680810 5680840 -193949310 + AT_rich Low_complexity Low_complexity 1 30 0 284 367 36 22 chr5 5681476 5681754 -193948396 - L1MEc LINE L1 -6081 315 34 26 50 0 0 chr5 5681985 5682025 -193948125 + AT_rich Low_complexity Low_complexity 1 40 0 32 86 0 0 chr5 5682366 5682447 -193947703 + AT_rich Low_complexity Low_complexity 1 81 0 582 114 0 0 chr5 5683600 5683688 -193946462 + (TA)n Simple_repeat Simple_repeat 1 88 0 6566 85 0 4 chr5 5683691 5684670 -193945480 - L1PA8 LINE L1 -17 6155 5179 4146 109 10 0 chr5 5684673 5685290 -193944860 + L1P LINE L1 3195 3817 -2329 2227 226 107 16 chr5 5685337 5686324 -193943826 - L1MC/D LINE L1 -743 5403 4362 1678 189 123 3 chr5 5686371 5686563 -193943587 + MSTA LTR MaLR 1 169 -259 309 26 0 0 chr5 5686563 5686601 -193943549 + (TC)n Simple_repeat Simple_repeat 2 39 0 1678 189 123 3 chr5 5686601 5686790 -193943360 + MSTA LTR MaLR 169 428 0 4179 118 53 16 chr5 5687161 5687856 -193942294 - L1PA13 LINE L1 0 6163 5443 247 323 39 23 chr5 5689067 5689197 -193940953 + L2 LINE L2 3141 3272 0 23 0 0 0 chr5 5689556 5689579 -193940571 + AT_rich Low_complexity Low_complexity 1 23 0 265 314 88 10 chr5 5689951 5690053 -193940097 - L2 LINE L2 -332 2981 2872 2319 223 25 28 chr5 5692090 5693009 -193937141 - L1MB8 LINE L1 0 6989 5902 2398 75 0 0 chr5 5693009 5693302 -193936848 - AluY SINE Alu -18 293 1 2319 223 25 28 chr5 5693302 5693516 -193936634 - L1MB8 LINE L1 -1087 5902 5689 1077 264 30 15 chr5 5693511 5693905 -193936245 - L1MB8 LINE L1 -1683 5274 4875 * 4040 212 37 25 chr5 5693909 5695459 -193934691 + L1MB3 LINE L1 4597 6171 -12 2141 264 75 48 chr5 5695483 5695990 -193934160 - L1MB8 LINE L1 -2074 4883 4391 576 106 0 141 chr5 5695990 5696132 -193934018 - L1MA8 LINE L1 -1 6290 6169 264 59 0 0 chr5 5696138 5696172 -193933978 + (TG)n Simple_repeat Simple_repeat 1 34 0 2141 264 75 48 chr5 5696172 5696950 -193933200 - L1MB8 LINE L1 -2570 4387 3556 829 259 48 48 chr5 5696958 5697267 -193932883 + MLT1C LTR MaLR 156 464 -3 2325 249 41 44 chr5 5697305 5698657 -193931493 - L1MB8 LINE L1 -4701 2258 914 21 0 0 0 chr5 5699751 5699772 -193930378 + AT_rich Low_complexity Low_complexity 1 21 0 349 324 55 14 chr5 5702262 5702407 -193927743 - MIR SINE MIR -109 153 3 234 191 0 0 chr5 5702419 5702466 -193927684 + CT-rich Low_complexity Low_complexity 3 49 0 237 266 0 0 chr5 5702804 5702898 -193927252 + (TG)n Simple_repeat Simple_repeat 2 95 0 391 184 10 10 chr5 5704260 5704358 -193925792 + GA-rich Low_complexity Low_complexity 4 101 0 24 32 0 0 chr5 5706287 5706318 -193923832 + AT_rich Low_complexity Low_complexity 1 31 0 593 304 104 36 chr5 5706622 5707093 -193923057 + MLT1K LTR MaLR 80 582 -6 340 264 47 0 chr5 5708285 5708391 -193921759 - L1ME LINE L1 -468 5653 5543 609 277 104 38 chr5 5708404 5708963 -193921187 - L1ME LINE L1 -813 5333 4885 6114 96 43 61 chr5 5709566 5710740 -193919410 + pTR5 LTR ERV1 741 2029 -409 367 213 11 0 chr5 5710740 5710834 -193919316 + LTR30 LTR ERV1 548 642 -80 1221 112 96 0 chr5 5710835 5711023 -193919127 + LTR12 LTR ERV1 377 582 -132 256 274 126 0 chr5 5711787 5711977 -193918173 + L1MEc LINE L1 2089 2302 -4094 2135 217 84 42 chr5 5712003 5712911 -193917239 + L1MEc LINE L1 2331 3276 -2939 2009 112 0 0 chr5 5712911 5713197 -193916953 - AluSq SINE Alu 0 311 26 790 163 7 14 chr5 5713645 5713786 -193916364 + FLAM_A SINE Alu 1 140 -2 375 243 43 64 chr5 5714601 5714741 -193915409 + MIR SINE MIR 17 153 -109 216 0 0 0 chr5 5714800 5714824 -193915326 + (CA)n Simple_repeat Simple_repeat 1 24 0 221 226 15 73 chr5 5715872 5716009 -193914141 + A-rich Low_complexity Low_complexity 2 130 0 21 0 0 0 chr5 5716538 5716559 -193913591 + AT_rich Low_complexity Low_complexity 1 21 0 1540 271 73 54 chr5 5716854 5717966 -193912184 - Charlie7 DNA MER1_type -168 2444 1312 508 237 16 37 chr5 5718471 5718661 -193911489 - Charlie7 DNA MER1_type -1846 766 581 328 224 152 8 chr5 5718961 5719086 -193911064 - Charlie7 DNA MER1_type -2421 191 49 2147 116 7 7 chr5 5719366 5719669 -193910481 + AluSx SINE Alu 2 304 -8 180 286 202 0 chr5 5721381 5721500 -193908650 - L2 LINE L2 -69 3244 3102 387 145 0 0 chr5 5722017 5722086 -193908064 + (ATG)n Simple_repeat Simple_repeat 2 70 0 1991 161 9 0 chr5 5722367 5722715 -193907435 - L1PA16 LINE L1 -5 6161 5811 2299 189 37 18 chr5 5722865 5723484 -193906666 - L1MA9 LINE L1 -472 5840 5207 4929 224 44 12 chr5 5723486 5723841 -193906309 + L1 LINE L1 3779 4121 -2025 258 32 0 0 chr5 5723841 5723872 -193906278 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 4929 224 44 12 chr5 5723872 5723952 -193906198 + L1 LINE L1 4121 4197 -1949 258 105 0 0 chr5 5723952 5723990 -193906160 + (CA)n Simple_repeat Simple_repeat 1 38 0 4929 224 44 12 chr5 5723990 5724926 -193905224 + L1 LINE L1 4197 5195 -951 227 223 54 31 chr5 5725091 5725221 -193904929 - HAL1b LINE L1 -535 813 681 2668 243 76 57 chr5 5725376 5725683 -193904467 - L1MD2 LINE L1 -13 6346 6046 1775 158 45 24 chr5 5725683 5726013 -193904137 - MER1B DNA MER1_type 0 337 1 2668 243 76 57 chr5 5726013 5726955 -193903195 - L1MD2 LINE L1 -313 6046 5056 844 268 27 27 chr5 5726950 5727249 -193902901 - L1MD2 LINE L1 -1450 4696 4398 * 22 0 0 0 chr5 5728831 5728853 -193901297 + AT_rich Low_complexity Low_complexity 1 22 0 1282 260 100 91 chr5 5732500 5732627 -193897523 - MLT1E2 LTR MaLR -110 516 392 887 205 124 95 chr5 5732627 5733080 -193897070 - MER31B LTR ERV1 0 466 1 1282 260 100 91 chr5 5733080 5733460 -193896690 - MLT1E2 LTR MaLR -234 392 1 9270 239 84 22 chr5 5733493 5733714 -193896436 + L1MC3 LINE L1 2432 2638 -5147 2123 139 10 3 chr5 5733714 5734024 -193896126 - AluSx SINE Alu 0 312 1 9270 239 84 22 chr5 5734024 5738829 -193891321 + L1MC3 LINE L1 2638 7771 -14 2139 104 0 44 chr5 5738948 5739266 -193890884 + AluSx SINE Alu 1 304 -8 277 284 173 12 chr5 5739421 5739583 -193890567 - MIR SINE MIR -21 241 54 293 357 58 0 chr5 5741141 5741295 -193888855 - MIR SINE MIR -72 190 28 200 333 181 7 chr5 5742033 5742171 -193887979 - L2 LINE L2 0 3313 3152 295 294 0 0 chr5 5742665 5742733 -193887417 + polypurine Low_complexity Low_complexity 2 69 0 1386 143 31 5 chr5 5743488 5743711 -193886439 - MER30 DNA MER1_type 0 230 2 2067 127 3 19 chr5 5744722 5745030 -193885120 + AluSq SINE Alu 1 303 -10 429 292 9 0 chr5 5745815 5745928 -193884222 + MER81 DNA DNA 1 114 0 322 111 0 32 chr5 5746755 5746818 -193883332 + (GAAA)n Simple_repeat Simple_repeat 4 64 0 227 274 166 68 chr5 5746820 5747469 -193882681 + HAL1 LINE L1 880 1592 -915 393 203 119 17 chr5 5748024 5748142 -193882008 + L2 LINE L2 3180 3309 -4 341 295 96 76 chr5 5748170 5748641 -193881509 + HAL1 LINE L1 2007 2486 -21 1679 193 3 23 chr5 5748758 5749063 -193881087 - AluJo SINE Alu -13 299 1 2202 119 7 0 chr5 5750598 5750892 -193879258 + AluSx SINE Alu 1 296 -16 697 306 105 35 chr5 5750909 5751568 -193878582 + L1M4 LINE L1 2204 2908 -3238 213 250 0 0 chr5 5751991 5752051 -193878099 + (TA)n Simple_repeat Simple_repeat 2 61 0 228 136 0 0 chr5 5752052 5752096 -193878054 - LTR66 LTR ERVL -172 438 395 3074 165 29 8 chr5 5752135 5752723 -193877427 + L1MC1 LINE L1 5734 6333 0 1507 161 56 21 chr5 5753227 5753513 -193876637 - AluJb SINE Alu -16 296 1 527 250 12 54 chr5 5754036 5754092 -193876058 - MER45A DNA AcHobo -1420 161 104 2539 59 0 13 chr5 5754092 5754397 -193875753 + AluY SINE Alu 1 301 -10 527 250 12 54 chr5 5754397 5754508 -193875642 - MER45A DNA AcHobo -1477 104 1 236 254 0 0 chr5 5758677 5758744 -193871406 - MIR SINE MIR -64 144 78 3949 161 18 60 chr5 5758881 5759700 -193870450 + LTR1 LTR ERV1 1 785 0 261 0 0 0 chr5 5760728 5760757 -193869393 + (CA)n Simple_repeat Simple_repeat 1 29 0 2541 174 47 19 chr5 5761023 5761551 -193868599 + MER67A LTR ERV1 1 543 0 623 183 215 5 chr5 5762439 5762599 -193867551 + LTR28 LTR ERV1 1 139 -286 304 197 14 0 chr5 5762610 5762681 -193867469 + LTR1 LTR ERV1 119 190 -595 * 3075 179 129 16 chr5 5762650 5763287 -193866863 + LTR28 LTR ERV1 308 1016 -4 189 178 22 0 chr5 5763322 5763367 -193866783 - MIR SINE MIR -70 138 93 303 204 0 107 chr5 5764284 5764387 -193865763 + HsTC2 DNA Tc2 5 96 -1802 1266 179 31 0 chr5 5764744 5765001 -193865149 + L1MB3 LINE L1 5919 6183 0 1905 101 12 0 chr5 5765004 5765262 -193864888 + AluSc SINE Alu 36 296 -13 1623 180 11 7 chr5 5765314 5765598 -193864552 + AluJb SINE Alu 1 285 -27 2848 121 27 16 chr5 5766884 5767332 -193862818 + MER4C LTR ERV1 5 457 -8 261 139 0 0 chr5 5767901 5767944 -193862206 + (CATATA)n Simple_repeat Simple_repeat 5 47 0 608 273 6 27 chr5 5768207 5768390 -193861760 - MER5A DNA MER1_type -4 185 7 1413 273 83 53 chr5 5768499 5769104 -193861046 + MER21B LTR ERV1 189 811 -52 269 170 21 85 chr5 5769202 5769296 -193860854 + (CATTG)n Simple_repeat Simple_repeat 1 88 0 619 277 15 29 chr5 5770403 5770598 -193859552 - MER20B DNA MER1_type -17 202 7 331 289 61 24 chr5 5770692 5770960 -193859190 + L1M4 LINE L1 2888 3163 -2983 269 245 60 119 chr5 5770999 5771150 -193859000 + LTR33A LTR ERVL 21 162 -361 310 200 0 15 chr5 5771389 5771454 -193858696 + LTR33A LTR ERVL 442 505 -18 252 235 0 0 chr5 5771453 5771504 -193858646 + LTR33A LTR ERVL 473 523 0 * 32 26 0 0 chr5 5771617 5771656 -193858494 + AT_rich Low_complexity Low_complexity 1 39 0 344 294 52 29 chr5 5771896 5772202 -193857948 + L1M4 LINE L1 3687 3999 -2147 239 293 0 0 chr5 5772210 5772285 -193857865 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 28 29 0 0 chr5 5772341 5772376 -193857774 + AT_rich Low_complexity Low_complexity 1 35 0 673 113 0 10 chr5 5773142 5773239 -193856911 + MER4A LTR ERV1 1 96 -568 2716 107 12 12 chr5 5773240 5773642 -193856508 + MER4A LTR ERV1 263 664 0 2409 51 24 0 chr5 5774599 5774891 -193855259 + AluY SINE Alu 1 299 -12 596 161 0 8 chr5 5774892 5775010 -193855140 - MER5A DNA MER1_type -54 135 19 360 0 0 0 chr5 5776010 5776050 -193854100 + (CA)n Simple_repeat Simple_repeat 1 40 0 2114 207 153 56 chr5 5776504 5777351 -193852799 + LTR1B LTR ERV1 1 826 0 437 220 164 95 chr5 5777619 5777851 -193852299 + MLT2B1 LTR ERVL 265 512 -8 288 318 48 16 chr5 5779510 5779699 -193850451 + L3 LINE CR1 753 947 -630 180 111 0 0 chr5 5780222 5780249 -193849901 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 23 0 0 0 chr5 5783669 5783692 -193846458 + AT_rich Low_complexity Low_complexity 1 23 0 355 131 0 0 chr5 5785002 5785063 -193845087 - L1MA4 LINE L1 -5 6295 6235 198 339 0 0 chr5 5785703 5785768 -193844382 + MIR3 SINE MIR 144 208 0 197 162 0 27 chr5 5787733 5787770 -193842380 - L2 LINE L2 -10 3303 3268 707 227 54 125 chr5 5788190 5788542 -193841608 - MER46C DNA MER2_type -5 333 7 295 317 49 28 chr5 5788636 5788778 -193841372 - MIR3 SINE MIR -28 180 36 276 279 60 117 chr5 5789315 5789648 -193840502 + L2 LINE L2 2958 3271 -1 317 95 0 0 chr5 5790027 5790069 -193840081 + L2 LINE L2 3261 3302 -11 194 293 0 52 chr5 5790326 5790384 -193839766 - L3 LINE CR1 -123 1454 1400 2169 139 0 3 chr5 5791861 5792163 -193837987 - AluSc SINE Alu -8 301 1 4732 112 4 8 chr5 5792707 5793420 -193836730 + L1PA13 LINE L1 5452 6161 -2 2326 97 3 0 chr5 5793850 5794150 -193836000 + AluSx SINE Alu 1 301 -11 973 259 79 36 chr5 5796098 5796708 -193833442 - L1MC5 LINE L1 -36 7925 7290 451 281 6 11 chr5 5796842 5797020 -193833130 - L1MC5 LINE L1 -733 7228 7052 244 211 33 22 chr5 5797086 5797176 -193832974 - L1MC4 LINE L1 -1098 6944 6854 3796 77 10 27 chr5 5797186 5797420 -193832730 - LTR10C LTR ERV1 -37 596 360 2829 13 0 0 chr5 5797420 5797733 -193832417 - AluYb8 SINE Alu -5 313 1 3796 77 10 27 chr5 5797733 5798079 -193832071 - LTR10C LTR ERV1 -273 360 1 282 233 26 86 chr5 5798087 5798203 -193831947 - L1MC5 LINE L1 -1191 6770 6662 23 33 0 0 chr5 5798229 5798259 -193831891 + AT_rich Low_complexity Low_complexity 1 30 0 672 250 75 4 chr5 5798714 5798942 -193831208 - L1MC5 LINE L1 -1866 5942 5699 337 115 0 0 chr5 5798950 5799002 -193831148 - MADE1 DNA Mariner 0 80 29 315 0 0 0 chr5 5799201 5799236 -193830914 + (CA)n Simple_repeat Simple_repeat 2 36 0 214 290 105 9 chr5 5799513 5799745 -193830405 + MIR3 SINE MIR 4 256 -6 2388 111 6 6 chr5 5800208 5800558 -193829592 + THE1B LTR MaLR 3 352 -12 887 201 8 72 chr5 5800567 5800830 -193829320 + MER4A LTR ERV1 1 246 -418 525 253 28 75 chr5 5800855 5801123 -193829027 + MER4C LTR ERV1 208 290 -175 2095 114 3 13 chr5 5801123 5801422 -193828728 - AluSc SINE Alu -13 296 1 525 253 28 75 chr5 5801422 5801591 -193828559 + MER4C LTR ERV1 290 465 0 189 304 89 13 chr5 5801592 5801671 -193828479 + MIR SINE MIR 58 142 -66 2298 88 7 3 chr5 5802153 5802449 -193827701 + AluSg SINE Alu 1 297 -13 26 101 0 0 chr5 5802945 5803034 -193827116 + AT_rich Low_complexity Low_complexity 1 89 0 1813 156 21 15 chr5 5803083 5803411 -193826739 - L1PA16 LINE L1 0 6166 5837 33 73 0 0 chr5 5804157 5804225 -193825925 + AT_rich Low_complexity Low_complexity 1 68 0 410 65 16 0 chr5 5804382 5804444 -193825706 + (TCCA)n Simple_repeat Simple_repeat 2 64 0 214 267 58 33 chr5 5805971 5806091 -193824059 + MIR SINE MIR 118 240 -22 2447 73 3 0 chr5 5806282 5806583 -193823567 + AluY SINE Alu 1 302 -9 1636 191 36 25 chr5 5807248 5807584 -193822566 + L1MA4 LINE L1 5896 6238 -62 3168 201 27 60 chr5 5807584 5808438 -193821712 + LTR1B LTR ERV1 1 826 0 1636 191 36 25 chr5 5808438 5808494 -193821656 + L1MA4 LINE L1 6238 6292 -8 350 237 10 9 chr5 5809216 5809326 -193820824 + L1PB1 LINE L1 4985 5094 -1052 2793 19 27 0 chr5 5809327 5809693 -193820457 - L1P LINE L1 -944 5202 4827 * 3876 11 0 0 chr5 5809671 5810130 -193820020 + L1PA2 LINE L1 5693 6151 -4 3514 113 40 3 chr5 5810142 5810835 -193819315 + L1PB1 LINE L1 5083 5791 -360 308 202 32 75 chr5 5810848 5810942 -193819208 - L1MC4 LINE L1 -1339 6703 6614 190 130 0 43 chr5 5810945 5810991 -193819159 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 2129 140 22 8 chr5 5810997 5811011 -193819139 + L1PB1 LINE L1 5782 5794 -357 194 88 0 29 chr5 5811011 5811045 -193819105 + (TA)n Simple_repeat Simple_repeat 2 34 0 2129 140 22 8 chr5 5811045 5811394 -193818756 + L1PB1 LINE L1 5794 6150 -1 282 216 41 21 chr5 5811520 5811617 -193818533 + (CATATA)n Simple_repeat Simple_repeat 1 99 0 1717 147 38 42 chr5 5812036 5812349 -193817801 + AluSx SINE Alu 1 312 0 260 332 39 19 chr5 5812552 5812760 -193817390 + L1ME3A LINE L1 114 325 -6071 212 128 21 21 chr5 5813181 5813228 -193816922 + (TATAA)n Simple_repeat Simple_repeat 2 48 0 3210 261 75 45 chr5 5813365 5814294 -193815856 + L1ME3A LINE L1 1624 2524 -3691 1806 63 14 5 chr5 5814294 5814550 -193815600 + AluY SINE Alu 60 317 0 3210 261 75 45 chr5 5814550 5816071 -193814079 + L1ME3A LINE L1 2524 4117 -2098 444 278 47 21 chr5 5816116 5816350 -193813800 + L1ME2 LINE L1 5924 6163 -1 5922 215 43 28 chr5 5818592 5819959 -193810191 + L1MC/D LINE L1 3524 4869 -1440 2193 124 0 16 chr5 5819959 5820274 -193809876 + AluSx SINE Alu 2 311 -1 5922 215 43 28 chr5 5820274 5820292 -193809858 + L1MC/D LINE L1 4869 4885 -1424 2771 7 0 0 chr5 5820292 5820595 -193809555 - AluYa5 SINE Alu -8 303 1 5922 215 43 28 chr5 5820595 5821211 -193808939 + L1MC/D LINE L1 4885 5566 -743 420 266 73 78 chr5 5821270 5821627 -193808523 + L1ME3A LINE L1 4999 5353 -862 1031 263 163 48 chr5 5821665 5822419 -193807731 + L1ME3A LINE L1 5391 6231 -8 307 269 74 28 chr5 5822496 5822604 -193807546 - MIR3 SINE MIR -8 200 88 24 0 0 0 chr5 5824347 5824371 -193805779 + AT_rich Low_complexity Low_complexity 1 24 0 485 167 9 26 chr5 5825084 5825198 -193804952 + L1MA10 LINE L1 6223 6334 0 37 39 0 0 chr5 5825345 5825396 -193804754 + AT_rich Low_complexity Low_complexity 1 51 0 420 226 189 6 chr5 5825545 5825709 -193804441 + MLT1J2 LTR MaLR 190 383 -67 332 124 22 45 chr5 5825996 5826085 -193804065 + GA-rich Low_complexity Low_complexity 2 88 0 180 0 0 0 chr5 5826612 5826632 -193803518 + (GA)n Simple_repeat Simple_repeat 1 20 0 407 310 44 44 chr5 5826950 5827108 -193803042 + MER5A DNA MER1_type 30 187 -2 207 340 30 0 chr5 5828045 5828145 -193802005 - MIR SINE MIR -1 261 159 219 279 38 56 chr5 5828732 5828902 -193801248 - MER5B DNA MER1_type -7 182 2 203 333 93 47 chr5 5829190 5829319 -193800831 + L2 LINE L2 3137 3271 -1 528 268 39 15 chr5 5829779 5829942 -193800208 + MIR SINE MIR 3 167 -58 2077 106 0 45 chr5 5830482 5830794 -193799356 - AluSg1 SINE Alu -11 298 1 227 267 0 0 chr5 5832379 5832424 -193797726 + (CTA)n Simple_repeat Simple_repeat 2 46 0 2001 139 10 3 chr5 5832622 5832917 -193797233 - AluJb SINE Alu -15 297 1 225 0 0 0 chr5 5833575 5833600 -193796550 + (CA)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr5 5833717 5833746 -193796404 + AT_rich Low_complexity Low_complexity 1 29 0 1205 197 9 0 chr5 5834540 5834763 -193795387 + AluJb SINE Alu 86 310 -2 2321 216 70 4 chr5 5835449 5835976 -193794174 - MER68 LTR ERV1 0 562 1 248 326 167 8 chr5 5838071 5838203 -193791947 - MIR3 SINE MIR -46 162 10 21 36 0 0 chr5 5840046 5840074 -193790076 + AT_rich Low_complexity Low_complexity 1 28 0 306 0 0 0 chr5 5840403 5840437 -193789713 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 333 63 56 chr5 5841719 5841845 -193788305 - MIR SINE MIR -122 140 14 209 220 0 20 chr5 5842939 5842989 -193787161 + (CA)n Simple_repeat Simple_repeat 2 50 0 221 301 14 14 chr5 5843668 5843741 -193786409 - L2 LINE L2 -1 3271 3199 280 405 7 0 chr5 5845883 5846031 -193784119 - MIR SINE MIR -109 153 5 345 279 78 23 chr5 5847461 5847638 -193782512 + MIR SINE MIR 4 187 -73 7421 164 36 13 chr5 5850628 5851906 -193778244 + L1M1 LINE L1 14 1320 -6245 * 11028 151 29 23 chr5 5851905 5852987 -193777163 + L1M1 LINE L1 2252 3325 -4240 2317 65 0 0 chr5 5852987 5853264 -193776886 + AluY SINE Alu 22 298 -13 11028 151 29 23 chr5 5853264 5855783 -193774367 + L1M1 LINE L1 3325 5887 -1678 2921 129 50 58 chr5 5855763 5856061 -193774089 + L1M1 LINE L1 6453 6752 -972 * 2212 113 7 0 chr5 5856061 5856370 -193773780 + AluSp SINE Alu 1 311 -2 2921 129 50 58 chr5 5856370 5856804 -193773346 + L1M1 LINE L1 6752 7197 -527 233 174 0 29 chr5 5857957 5858026 -193772124 + (TATAA)n Simple_repeat Simple_repeat 1 67 0 342 113 68 0 chr5 5858031 5858164 -193771986 + (TA)n Simple_repeat Simple_repeat 1 142 0 35 0 0 0 chr5 5858164 5858199 -193771951 + AT_rich Low_complexity Low_complexity 1 35 0 297 0 0 0 chr5 5858353 5858386 -193771764 + (TAA)n Simple_repeat Simple_repeat 2 34 0 473 196 0 59 chr5 5858730 5858832 -193771318 - MER3 DNA MER1_type -1 208 113 458 191 159 48 chr5 5858837 5858963 -193771187 - MER3 DNA MER1_type -26 183 44 519 333 7 89 chr5 5859446 5859861 -193770289 - L2 LINE L2 -1 3312 2932 432 82 0 0 chr5 5860436 5860497 -193769653 + (TG)n Simple_repeat Simple_repeat 1 61 0 557 261 84 51 chr5 5861342 5861653 -193768497 + L1MD2 LINE L1 5702 6022 -337 * 1346 234 75 7 chr5 5861382 5861796 -193768354 + L1MB8 LINE L1 5737 6178 0 2161 79 0 0 chr5 5861808 5862075 -193768075 + AluY SINE Alu 44 310 -1 334 64 21 0 chr5 5863375 5863422 -193766728 - THE1C LTR MaLR -322 53 6 442 81 0 27 chr5 5863949 5864023 -193766127 + (TCTCC)n Simple_repeat Simple_repeat 2 73 0 284 304 71 76 chr5 5864339 5864563 -193765587 + MIR SINE MIR 37 259 -3 300 303 97 0 chr5 5867252 5867397 -193762753 - MIR SINE MIR -6 256 98 249 221 0 0 chr5 5868365 5868433 -193761717 + (TCCA)n Simple_repeat Simple_repeat 1 68 0 296 303 28 18 chr5 5868680 5868789 -193761361 - L2 LINE L2 -238 3034 2925 27 29 0 0 chr5 5869480 5869514 -193760636 + AT_rich Low_complexity Low_complexity 1 34 0 386 208 52 10 chr5 5870370 5870466 -193759684 - L2 LINE L2 0 3313 3214 294 304 114 10 chr5 5870517 5870718 -193759432 + LTR50 LTR ERVL 19 240 -555 694 231 231 0 chr5 5871101 5871365 -193758785 + LTR50 LTR ERVL 471 795 0 450 227 82 0 chr5 5871882 5871992 -193758158 + LTR50 LTR ERVL 9 127 -668 292 304 40 40 chr5 5872042 5872167 -193757983 + MIR3 SINE MIR 30 154 -54 193 0 0 0 chr5 5873751 5873775 -193756375 + MIR SINE MIR 129 152 -110 2152 313 23 37 chr5 5873832 5874669 -193755481 + L1M4b LINE L1 11 835 -6024 1845 186 65 35 chr5 5874670 5875007 -193755143 + L1MA9 LINE L1 5833 6158 -154 483 18 0 0 chr5 5875007 5875063 -193755087 + (CA)n Simple_repeat Simple_repeat 1 56 0 1845 186 65 35 chr5 5875063 5875118 -193755032 + L1MA9 LINE L1 6158 6210 -102 222 37 0 0 chr5 5875118 5875145 -193755005 + (TG)n Simple_repeat Simple_repeat 2 28 0 1845 186 65 35 chr5 5875145 5875180 -193754970 + L1MA9 LINE L1 6210 6274 -38 744 226 111 9 chr5 5875191 5875204 -193754946 + L1M4b LINE L1 1546 1556 -5299 2027 135 0 10 chr5 5875204 5875541 -193754609 + AluSg SINE Alu 1 310 0 744 226 111 9 chr5 5875541 5875814 -193754336 + L1M4b LINE L1 1556 1855 -5000 416 185 6 92 chr5 5875855 5875965 -193754185 + L1M4b LINE L1 2087 2205 -4753 2144 169 45 85 chr5 5875965 5876457 -193753693 + MER70A LTR ERVL 1 472 0 416 185 6 92 chr5 5876457 5876481 -193753669 + L1M4b LINE L1 2205 2609 -4349 * 3053 177 80 49 chr5 5876476 5877217 -193752933 + L1MB7 LINE L1 5421 6184 0 1302 245 40 0 chr5 5881182 5881509 -193748641 + MER63B DNA MER1_type 1 340 -96 315 260 173 36 chr5 5882052 5882329 -193747821 + L1ME LINE L1 5522 5836 -285 7409 59 10 0 chr5 5882606 5883656 -193746494 - L1PA7 LINE L1 -3 6151 5096 2205 114 3 18 chr5 5883658 5883990 -193746160 - L1PA7 LINE L1 -1127 5019 4693 324 307 203 63 chr5 5886108 5886473 -193743677 - L1M2 LINE L1 -5908 941 526 323 298 13 25 chr5 5886474 5886632 -193743518 + G-rich Low_complexity Low_complexity 2 157 0 3946 149 99 45 chr5 5887417 5887775 -193742375 - pTR5 LTR ERV1 0 2606 2269 2909 0 0 0 chr5 5887775 5888082 -193742068 + AluYa5 SINE Alu 1 307 -4 3946 149 99 45 chr5 5888082 5889140 -193741010 - pTR5 LTR ERV1 -337 2269 1524 281 276 69 41 chr5 5890211 5890376 -193739774 - Charlie8 DNA MER1_type -2164 253 104 839 198 135 21 chr5 5890546 5890738 -193739412 + MER58A DNA MER1_type 4 217 -7 183 100 0 0 chr5 5890838 5890868 -193739282 + (TAAAAA)n Simple_repeat Simple_repeat 5 34 0 34 72 0 0 chr5 5892138 5892207 -193737943 + AT_rich Low_complexity Low_complexity 1 69 0 991 286 95 24 chr5 5892416 5892923 -193737227 - MLT1H LTR MaLR 0 549 7 512 209 0 0 chr5 5893300 5893405 -193736745 + MLT1B LTR MaLR 31 135 -255 269 292 49 49 chr5 5893924 5894068 -193736082 - MER5B DNA MER1_type -18 160 17 831 158 8 0 chr5 5894928 5895048 -193735102 - FLAM_C SINE Alu -21 122 2 2215 89 4 0 chr5 5895943 5896253 -193733897 + AluSp SINE Alu 1 311 0 622 232 33 7 chr5 5896368 5896519 -193733631 - MER69A DNA AcHobo -1 176 22 252 0 0 0 chr5 5896519 5896547 -193733603 + (TG)n Simple_repeat Simple_repeat 1 28 0 2228 134 132 5 chr5 5897535 5897915 -193732235 - MSTA LTR MaLR 0 428 1 376 285 72 80 chr5 5898208 5898634 -193731516 - L1 LINE L1 -1359 4787 4357 601 221 58 96 chr5 5898684 5898892 -193731258 + MIR SINE MIR 21 220 -42 24 0 0 0 chr5 5898954 5898978 -193731172 + AT_rich Low_complexity Low_complexity 1 24 0 356 326 86 29 chr5 5899062 5899375 -193730775 - L1 LINE L1 -1908 4238 3908 21 36 0 0 chr5 5899651 5899679 -193730471 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 5899725 5899753 -193730397 + AT_rich Low_complexity Low_complexity 1 28 0 1755 190 54 2 chr5 5899799 5900223 -193729927 + LTR53 LTR ERVL 1 519 0 810 143 45 184 chr5 5900471 5900694 -193729456 - 7SK RNA RNA -1 192 1 25 31 0 0 chr5 5901002 5901034 -193729116 + AT_rich Low_complexity Low_complexity 1 32 0 1590 210 7 3 chr5 5901139 5901439 -193728711 - AluJo SINE Alu -11 301 1 354 351 71 37 chr5 5902186 5902508 -193727642 - HAL1b LINE L1 -784 564 232 29 0 5 0 chr5 5903120 5903177 -193726973 + AT_rich Low_complexity Low_complexity 1 29 0 461 240 16 32 chr5 5903241 5903366 -193726784 + MIR SINE MIR 118 240 -22 35 63 0 0 chr5 5903385 5903448 -193726702 + AT_rich Low_complexity Low_complexity 1 63 0 253 301 24 0 chr5 5904745 5904828 -193725322 + L2 LINE L2 3227 3311 -2 261 0 0 0 chr5 5905213 5905242 -193724908 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 565 330 48 21 chr5 5905751 5906084 -193724066 + L1M2 LINE L1 11 352 -6497 11114 238 20 34 chr5 5906842 5909468 -193720682 + L1PA12 LINE L1 2231 4961 -2623 1988 134 108 15 chr5 5909468 5909811 -193720339 + THE1C LTR MaLR 1 375 0 11114 238 20 34 chr5 5909811 5910913 -193719237 + L1PA12 LINE L1 4961 6076 -1508 13000 150 18 25 chr5 5910921 5913162 -193716988 + L1P LINE L1 11 2237 -3909 6058 166 4 10 chr5 5913162 5914358 -193715792 + L1MA4 LINE L1 5105 6294 -6 2370 205 8 149 chr5 5915433 5915515 -193714635 - MLT2B3 LTR ERVL 0 515 423 680 92 0 17 chr5 5915515 5915635 -193714515 + (TAGA)n Simple_repeat Simple_repeat 1 118 0 2370 205 8 149 chr5 5915635 5916137 -193714013 - MLT2B3 LTR ERVL -92 423 13 279 203 0 0 chr5 5916664 5916723 -193713427 + (CA)n Simple_repeat Simple_repeat 1 59 0 22 103 0 0 chr5 5917573 5917651 -193712499 + AT_rich Low_complexity Low_complexity 1 78 0 320 308 65 54 chr5 5917740 5918094 -193712056 + L1MEd LINE L1 846 1203 -4916 748 202 75 144 chr5 5918120 5918711 -193711439 - LTR34 LTR ERV1 -4 695 135 464 160 57 19 chr5 5918784 5918890 -193711260 - MER4C LTR ERV1 -353 112 3 1413 192 63 63 chr5 5918948 5919328 -193710822 - MSTD LTR MaLR -2 394 15 218 189 0 0 chr5 5921198 5921235 -193708915 + CT-rich Low_complexity Low_complexity 2 38 0 201 273 105 70 chr5 5921292 5921464 -193708686 + MIR SINE MIR 30 207 -55 2553 222 21 9 chr5 5921872 5922404 -193707746 - MER74A LTR ERVL -18 540 3 384 304 71 30 chr5 5924383 5924551 -193705599 + MIR SINE MIR 68 242 -20 279 79 0 0 chr5 5924564 5924602 -193705548 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 631 218 15 0 chr5 5925778 5925911 -193704239 + L1MA10 LINE L1 4685 4819 -1327 * 3488 204 7 59 chr5 5925907 5926774 -193703376 + L1MA10 LINE L1 5512 6333 -1 1655 187 126 6 chr5 5927791 5928117 -193702033 + MLT1A1 LTR MaLR 1 365 0 259 160 32 96 chr5 5928649 5928743 -193701407 - Looper DNA T2_type -97 1461 1374 644 175 10 0 chr5 5928791 5928888 -193701262 + MER2 DNA MER2_type 1 98 -247 1011 251 105 19 chr5 5928888 5929203 -193700947 - MER2 DNA MER2_type 0 345 4 652 235 39 59 chr5 5929204 5929323 -193700827 + MER2 DNA MER2_type 95 215 -130 2130 130 0 0 chr5 5929323 5929622 -193700528 - AluSx SINE Alu -13 299 1 652 235 39 59 chr5 5929622 5929757 -193700393 + MER2 DNA MER2_type 215 344 -1 203 315 41 0 chr5 5930008 5930081 -193700069 + MER91C DNA MER1_type 1 76 -64 301 242 48 65 chr5 5930186 5930372 -193699778 - L1MEd LINE L1 -4891 1228 1046 1164 205 43 26 chr5 5930591 5930893 -193699257 - L1MC3 LINE L1 0 7785 7479 2271 114 0 0 chr5 5931148 5931446 -193698704 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 5931455 5931476 -193698674 + AT_rich Low_complexity Low_complexity 1 21 0 1870 125 39 11 chr5 5931495 5931776 -193698374 - AluSx SINE Alu -13 299 11 2031 157 80 27 chr5 5931926 5932302 -193697848 + MSTD LTR MaLR 1 396 0 22 35 0 0 chr5 5932451 5932480 -193697670 + AT_rich Low_complexity Low_complexity 1 29 0 715 285 191 19 chr5 5932642 5933060 -193697090 + LTR16C LTR ERVL 2 491 0 249 300 77 31 chr5 5933151 5933281 -193696869 - MIR3 SINE MIR -66 142 7 6920 82 6 6 chr5 5934912 5935811 -193694339 + HERVL-A2 LTR ERVL 4756 5654 0 2209 160 36 31 chr5 5935811 5936359 -193693791 + MLT2A2 LTR ERVL 1 554 0 217 191 0 43 chr5 5937014 5937061 -193693089 + GA-rich Low_complexity Low_complexity 4 48 0 225 0 0 0 chr5 5937325 5937350 -193692800 + (TG)n Simple_repeat Simple_repeat 2 26 0 2001 230 91 48 chr5 5937350 5937958 -193692192 - MER21B LTR ERV1 -86 777 144 355 279 23 0 chr5 5938073 5938159 -193691991 - MER21B LTR ERV1 -764 99 12 208 211 58 19 chr5 5938565 5938617 -193691533 + MIR SINE MIR 99 153 -55 1977 181 68 32 chr5 5938647 5939090 -193691060 - LTR2B LTR ERV1 0 490 32 1251 244 54 21 chr5 5939609 5939941 -193690209 - LTR48B LTR ERV1 -4 640 298 4203 169 80 38 chr5 5939942 5940916 -193689234 - LTR48B-int LTR ERV1 -508 5823 4809 375 152 0 15 chr5 5940914 5940980 -193689170 - LTR48B-int LTR ERV1 -4475 1856 1792 * 258 159 23 0 chr5 5941069 5941113 -193689037 - LTR48B-int LTR ERV1 -4699 1632 1588 299 247 11 22 chr5 5941666 5941755 -193688395 - LTR48B-int LTR ERV1 -4954 1377 1290 4766 195 53 86 chr5 5941806 5943138 -193687012 - LTR48B-int LTR ERV1 -5042 1289 1 2668 171 79 53 chr5 5943140 5943229 -193686921 - LTR48B LTR ERV1 0 644 559 2949 84 19 11 chr5 5943229 5943600 -193686550 - THE1C LTR MaLR 0 375 2 2668 171 79 53 chr5 5943600 5943909 -193686241 - LTR48B LTR ERV1 -85 559 222 2433 83 0 3 chr5 5943909 5944221 -193685929 + AluY SINE Alu 1 311 0 2668 171 79 53 chr5 5944221 5944428 -193685722 - LTR48B LTR ERV1 -422 222 22 704 270 89 31 chr5 5944594 5944853 -193685297 + MLT1J LTR MaLR 39 312 -199 201 133 0 0 chr5 5946030 5946060 -193684090 + (GA)n Simple_repeat Simple_repeat 1 30 0 1366 131 66 0 chr5 5946092 5946290 -193683860 - AluJb SINE Alu -16 296 86 26 0 0 0 chr5 5946294 5946320 -193683830 + AT_rich Low_complexity Low_complexity 1 26 0 388 231 92 75 chr5 5946865 5946909 -193683241 - MIR SINE MIR -64 198 156 3342 159 35 0 chr5 5946909 5947444 -193682706 + MER41C LTR ERV1 1 554 0 388 231 92 75 chr5 5947444 5947572 -193682578 - MIR SINE MIR -106 156 23 5354 141 33 20 chr5 5948781 5949663 -193680487 + MER4D LTR ERV1 3 895 -8 606 118 0 0 chr5 5949957 5950050 -193680100 + (TA)n Simple_repeat Simple_repeat 2 94 0 2895 83 103 5 chr5 5950051 5950459 -193679691 + LTR7 LTR ERV1 1 448 -2 208 256 0 0 chr5 5950460 5950503 -193679647 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 329 161 11 75 chr5 5950660 5950753 -193679397 + L1MB4 LINE L1 6093 6179 -1 1040 153 38 169 chr5 5950934 5951206 -193678944 + L1MD3 LINE L1 7547 7759 -236 2214 76 0 0 chr5 5951206 5951481 -193678669 + AluY SINE Alu 26 300 -11 1040 153 38 169 chr5 5951481 5951580 -193678570 + L1MD3 LINE L1 7759 7869 -126 913 227 97 51 chr5 5951599 5952166 -193677984 - LTR48 LTR ERV1 -4 783 1 575 224 2 3 chr5 5952166 5952289 -193677861 + L1MD3 LINE L1 6240 6359 0 250 265 34 6 chr5 5952452 5952539 -193677611 + MIR SINE MIR 58 146 -62 1420 220 26 47 chr5 5952539 5952794 -193677356 - MLT1A2 LTR MaLR 0 374 128 1906 121 220 14 chr5 5952794 5953149 -193677001 - MSTA LTR MaLR 0 428 1 1420 220 26 47 chr5 5953149 5953275 -193676875 - MLT1A2 LTR MaLR -246 128 1 2221 165 49 21 chr5 5954211 5954727 -193675423 + MLT2A2 LTR ERVL 1 554 0 180 125 0 0 chr5 5957762 5957794 -193672356 + (TG)n Simple_repeat Simple_repeat 1 32 0 664 223 13 25 chr5 5957821 5957978 -193672172 - Tigger2 DNA MER2_type -16 2702 2548 * 866 173 46 20 chr5 5957954 5958151 -193671999 - Tigger2 DNA MER2_type -2509 209 8 847 151 50 13 chr5 5958421 5958580 -193671570 - L1MC2 LINE L1 -13 6331 6167 23 0 0 0 chr5 5959878 5959901 -193670249 + AT_rich Low_complexity Low_complexity 1 23 0 384 262 10 0 chr5 5959923 5960026 -193670124 + MER5B DNA MER1_type 1 104 -74 205 79 53 79 chr5 5960116 5960154 -193669996 - MER5A DNA MER1_type -152 37 1 617 201 109 35 chr5 5960175 5960349 -193669801 + MER5A DNA MER1_type 1 187 -2 2099 134 3 0 chr5 5961526 5961833 -193668317 - AluSx SINE Alu -4 308 1 305 196 0 0 chr5 5963357 5963413 -193666737 + L1MC4 LINE L1 6648 6703 -1339 22 0 0 0 chr5 5963852 5963874 -193666276 + AT_rich Low_complexity Low_complexity 1 22 0 1687 41 0 0 chr5 5965155 5965349 -193664801 + L1PA5 LINE L1 5957 6150 -4 28 29 0 0 chr5 5965395 5965430 -193664720 + AT_rich Low_complexity Low_complexity 1 35 0 1695 244 17 3 chr5 5967536 5967896 -193662254 - MLT1A1 LTR MaLR 0 365 1 284 179 30 0 chr5 5968364 5968431 -193661719 + CT-rich Low_complexity Low_complexity 3 71 0 203 346 31 43 chr5 5968814 5968976 -193661174 - L2 LINE L2 -466 2848 2689 407 306 40 30 chr5 5969012 5969211 -193660939 - L1M4 LINE L1 -1104 5042 4842 292 166 5 242 chr5 5969446 5969657 -193660493 + MLT1H LTR MaLR 279 439 -110 1836 237 60 38 chr5 5970282 5970885 -193659265 - L1MC4 LINE L1 -248 7794 7179 589 304 116 42 chr5 5970916 5971374 -193658776 - LTR67 LTR ERVL -5 552 61 197 200 36 0 chr5 5971434 5971489 -193658661 + T-rich Low_complexity Low_complexity 5 61 0 262 291 0 38 chr5 5972966 5973045 -193657105 + CT-rich Low_complexity Low_complexity 2 77 0 440 346 33 22 chr5 5973305 5973522 -193656628 + MIR SINE MIR 3 226 -36 25 51 0 0 chr5 5974842 5974881 -193655269 + AT_rich Low_complexity Low_complexity 1 39 0 2184 108 0 3 chr5 5976303 5976598 -193653552 + AluSx SINE Alu 1 294 -18 1137 210 30 63 chr5 5976691 5976966 -193653184 + MER33 DNA MER1_type 3 267 -2318 2226 80 3 13 chr5 5976966 5977266 -193652884 - AluSp SINE Alu -16 297 1 1137 210 30 63 chr5 5977266 5977323 -193652827 + MER33 DNA MER1_type 267 324 0 186 226 83 60 chr5 5977527 5977611 -193652539 - MIR SINE MIR -140 122 37 194 279 0 0 chr5 5980662 5980705 -193649445 - MIR SINE MIR -109 153 111 189 74 0 0 chr5 5980761 5980788 -193649362 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 201 196 0 0 chr5 5981104 5981150 -193649000 + (TA)n Simple_repeat Simple_repeat 2 47 0 4903 106 10 23 chr5 5981625 5982359 -193647791 + L1PA12 LINE L1 5333 6062 -106 2211 304 140 22 chr5 5983872 5985369 -193644781 + L2 LINE L2 1382 3107 -206 2656 111 3 11 chr5 5985369 5985747 -193644403 + THE1C LTR MaLR 1 375 0 2211 304 140 22 chr5 5985747 5985972 -193644178 + L2 LINE L2 3107 3304 -9 351 200 16 96 chr5 5986033 5986158 -193643992 - MIR SINE MIR -138 124 10 192 314 35 47 chr5 5986177 5986198 -193643952 - L2 LINE L2 -54 3218 3198 1925 193 85 9 chr5 5986198 5986623 -193643527 - MSTB2 LTR MaLR 0 457 1 192 314 35 47 chr5 5986623 5986687 -193643463 - L2 LINE L2 -74 3198 3134 1592 243 49 27 chr5 5986922 5987411 -193642739 - MLT1D LTR MaLR 0 505 6 208 174 0 22 chr5 5987722 5987768 -193642382 + T-rich Low_complexity Low_complexity 3 47 0 2319 57 0 0 chr5 5988488 5988821 -193641329 - AluY SINE Alu 0 333 1 2290 107 0 0 chr5 5988891 5989191 -193640959 - AluY SINE Alu -11 300 1 215 284 210 33 chr5 5989214 5989457 -193640693 - L2 LINE L2 -527 2787 2502 26 93 0 0 chr5 5990126 5990201 -193639949 + AT_rich Low_complexity Low_complexity 1 75 0 1616 179 14 0 chr5 5990632 5990946 -193639204 - AluJb SINE Alu 0 318 1 1108 278 65 15 chr5 5992259 5992662 -193637488 + LTR16A LTR ERVL 25 447 -3 1832 132 30 40 chr5 5993404 5993776 -193636374 - THE1C LTR MaLR 0 375 8 3641 224 7 45 chr5 5994308 5994325 -193635825 - L1P LINE L1 -4290 1856 1840 14056 128 7 6 chr5 5994325 5997420 -193632730 - L1PA8A LINE L1 -6 6440 3345 3641 224 7 45 chr5 5997420 5998474 -193631676 - L1P LINE L1 -4306 1840 826 390 98 0 0 chr5 5998451 5998502 -193631648 - L1PA8A LINE L1 -4774 1101 1051 * 5121 100 16 12 chr5 5998602 5999415 -193630735 - L1PA8A LINE L1 -4801 1074 259 667 194 20 101 chr5 5999650 5999897 -193630253 + LTR12 LTR ERV1 238 464 -250 1535 105 3 88 chr5 5999926 6000211 -193629939 - L1PA8A LINE L1 -5613 262 2 189 215 62 62 chr5 6000968 6001033 -193629117 - MIR SINE MIR -88 174 110 715 215 34 10 chr5 6001359 6001564 -193628586 - MLT1C LTR MaLR -251 216 7 22 35 0 0 chr5 6002517 6002546 -193627604 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 6002996 6003017 -193627133 + AT_rich Low_complexity Low_complexity 1 21 0 2234 102 10 0 chr5 6005808 6006112 -193624038 + AluSp SINE Alu 1 307 -6 273 325 95 31 chr5 6006761 6007118 -193623032 + L3 LINE CR1 832 1211 -366 1436 96 0 40 chr5 6007657 6007856 -193622294 - AluSg SINE Alu -119 191 1 22 0 0 0 chr5 6008337 6008359 -193621791 + AT_rich Low_complexity Low_complexity 1 22 0 288 170 0 0 chr5 6009944 6009997 -193620153 + (TG)n Simple_repeat Simple_repeat 2 54 0 744 226 92 36 chr5 6010324 6010745 -193619405 - MLT1D LTR MaLR -4 501 21 1360 110 24 89 chr5 6011042 6011288 -193618862 - MER30 DNA MER1_type 0 230 1 472 130 0 0 chr5 6011925 6011994 -193618156 + AluSq/x SINE Alu 84 152 -160 229 203 29 14 chr5 6012934 6013003 -193617147 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 565 316 120 43 chr5 6013999 6014669 -193615481 - L2 LINE L2 -30 3283 2567 1257 149 65 84 chr5 6015410 6015826 -193614324 - MSTA LTR MaLR -12 416 9 627 267 90 54 chr5 6015848 6016462 -193613688 + L1MEc LINE L1 827 1462 -4934 307 127 0 0 chr5 6016479 6016534 -193613616 + L1MA3 LINE L1 6250 6304 -1 315 223 19 19 chr5 6016699 6016802 -193613348 + L1M4 LINE L1 4805 4907 -1239 * 4261 208 31 22 chr5 6016795 6017206 -193612944 - L1MA10 LINE L1 -2 6332 5926 2240 139 11 24 chr5 6017206 6017586 -193612564 - THE1C LTR MaLR 0 375 1 9395 126 12 73 chr5 6017586 6019267 -193610883 - THE1C-int LTR MaLR 0 1580 1 2026 174 13 16 chr5 6019272 6019646 -193610504 - THE1C LTR MaLR 0 375 3 4261 208 31 22 chr5 6019646 6021097 -193609053 - L1MA10 LINE L1 -411 5923 4438 1026 243 117 23 chr5 6021100 6021468 -193608682 + MSTD LTR MaLR 1 396 0 1822 196 17 46 chr5 6021475 6022417 -193607733 - L1MA10 LINE L1 -1031 5115 3757 231 26 26 0 chr5 6022415 6022454 -193607696 + L1PA7 LINE L1 5092 5131 -1015 * 5622 64 18 0 chr5 6022554 6023396 -193606754 + L1PA7 LINE L1 5183 6039 -115 1747 171 39 15 chr5 6023399 6023733 -193606417 + THE1B LTR MaLR 23 364 0 10030 106 24 35 chr5 6023734 6024233 -193605917 + THE1B-int LTR MaLR 2 505 -1075 2515 82 17 6 chr5 6024233 6024585 -193605565 + L1PA8A LINE L1 5776 6131 0 10030 106 24 35 chr5 6024585 6025681 -193604469 + THE1B-int LTR MaLR 505 1580 0 1915 144 57 28 chr5 6025681 6026035 -193604115 + THE1B LTR MaLR 1 364 0 417 272 159 46 chr5 6026041 6026324 -193603826 + L1M4 LINE L1 5046 5360 -786 229 218 0 0 chr5 6026326 6026381 -193603769 + L1MB7 LINE L1 2409 2463 -3921 4805 160 48 25 chr5 6026441 6027551 -193602599 + L1MA7 LINE L1 5158 6291 0 1647 225 25 94 chr5 6027560 6027818 -193602332 + L1MB7 LINE L1 4776 5050 -1332 342 80 0 0 chr5 6027818 6027868 -193602282 + (TA)n Simple_repeat Simple_repeat 2 51 0 1647 225 25 94 chr5 6027868 6028332 -193601818 + L1MB7 LINE L1 5050 5448 -934 335 218 92 3 chr5 6028552 6028710 -193601440 + L1MB7 LINE L1 5585 5773 -643 2321 233 5 19 chr5 6028802 6029417 -193600733 + L1MB7 LINE L1 5806 6411 -9 338 0 24 0 chr5 6030227 6030269 -193599881 + (TG)n Simple_repeat Simple_repeat 2 44 0 227 309 37 0 chr5 6030975 6031056 -193599094 + L3 LINE CR1 1492 1575 -2 1268 215 21 38 chr5 6031130 6031470 -193598680 + MER31B LTR ERV1 3 336 -130 245 230 14 14 chr5 6031498 6031572 -193598578 + MER67B LTR ERV1 584 657 -4 971 208 58 5 chr5 6031572 6031725 -193598425 + MER20 DNA MER1_type 2 170 -49 390 74 0 0 chr5 6031725 6031779 -193598371 + (CA)n Simple_repeat Simple_repeat 1 54 0 971 208 58 5 chr5 6031779 6031832 -193598318 + MER20 DNA MER1_type 170 219 0 280 252 106 31 chr5 6032007 6032268 -193597882 - MLT1J1 LTR MaLR -10 436 152 246 283 112 74 chr5 6033272 6033541 -193596609 - MLT1J2 LTR MaLR -65 385 107 984 162 149 4 chr5 6033686 6033921 -193596229 - LTR18B LTR ERVL -87 527 259 1366 106 11 0 chr5 6034140 6034329 -193595821 - LTR18B LTR ERVL -423 191 1 272 292 42 0 chr5 6034329 6034420 -193595730 - MLT1J1 LTR MaLR -343 103 9 986 257 159 0 chr5 6036238 6036495 -193593655 - MER77 LTR ERV1 0 605 308 1071 232 62 77 chr5 6036612 6036948 -193593202 - MER77 LTR ERV1 -253 352 22 234 0 0 0 chr5 6037503 6037529 -193592621 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1782 152 43 0 chr5 6037801 6038077 -193592073 + AluJo SINE Alu 6 293 -19 1091 213 126 60 chr5 6038961 6039000 -193591150 - MLT2B1 LTR ERVL -1 413 378 234 91 0 0 chr5 6039000 6039033 -193591117 + (TG)n Simple_repeat Simple_repeat 1 33 0 1091 213 126 60 chr5 6039033 6039422 -193590728 - MLT2B1 LTR ERVL -36 378 1 224 368 0 40 chr5 6040204 6040329 -193589821 - L2 LINE L2 -13 3300 3181 485 265 139 0 chr5 6041904 6042070 -193588080 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr5 6042295 6042323 -193587827 + AT_rich Low_complexity Low_complexity 1 28 0 577 301 79 105 chr5 6043545 6044217 -193585933 + L3 LINE CR1 36 685 -892 5328 147 14 3 chr5 6044217 6045433 -193584717 + L1PA15 LINE L1 4933 6161 -4 577 301 79 105 chr5 6045433 6045572 -193584578 + L3 LINE CR1 685 826 -751 2308 156 48 22 chr5 6045635 6046052 -193584098 - MSTA LTR MaLR 0 428 1 240 252 79 47 chr5 6046387 6046514 -193583636 + L3 LINE CR1 1426 1556 -21 405 0 0 0 chr5 6046570 6046615 -193583535 + (CA)n Simple_repeat Simple_repeat 1 45 0 2290 101 0 3 chr5 6048617 6048915 -193581235 - AluSq SINE Alu -16 297 1 434 278 6 17 chr5 6050189 6050369 -193579781 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 212 307 20 7 chr5 6050388 6050538 -193579612 + (TATATG)n Simple_repeat Simple_repeat 3 154 0 433 297 11 0 chr5 6050617 6050792 -193579358 + (TATATG)n Simple_repeat Simple_repeat 3 179 0 346 319 0 0 chr5 6050811 6050977 -193579173 + (TATATG)n Simple_repeat Simple_repeat 4 169 0 210 333 7 20 chr5 6050980 6051130 -193579020 + (CATATA)n Simple_repeat Simple_repeat 3 150 0 272 29 0 0 chr5 6052294 6052329 -193577821 + L1PA6 LINE L1 6111 6145 -9 213 39 0 0 chr5 6052686 6052712 -193577438 + (TG)n Simple_repeat Simple_repeat 2 27 0 508 173 9 27 chr5 6053690 6053800 -193576350 + MER67D LTR ERV1 1 108 -406 339 188 25 12 chr5 6053835 6053915 -193576235 + MER67D LTR ERV1 430 510 -4 2313 154 35 31 chr5 6054343 6054892 -193575258 + MLT2A2 LTR ERVL 1 554 0 225 0 0 0 chr5 6055792 6055817 -193574333 + (TC)n Simple_repeat Simple_repeat 2 26 0 1813 147 6 35 chr5 6056572 6056884 -193573266 + AluJb SINE Alu 1 303 -9 26 30 0 0 chr5 6056949 6056982 -193573168 + AT_rich Low_complexity Low_complexity 1 33 0 2217 110 0 26 chr5 6057274 6057583 -193572567 - AluSq SINE Alu -12 301 1 445 228 33 0 chr5 6058870 6058962 -193571188 - MLT1B LTR MaLR -32 358 264 1246 208 82 38 chr5 6058966 6059332 -193570818 + MLT1B LTR MaLR 6 387 -3 2492 67 0 3 chr5 6060120 6060420 -193569730 + AluY SINE Alu 1 299 -12 183 80 0 0 chr5 6063489 6063514 -193566636 + (A)n Simple_repeat Simple_repeat 1 25 0 240 227 18 118 chr5 6063853 6063963 -193566187 - MIR SINE MIR -7 255 157 800 114 0 64 chr5 6063965 6064105 -193566045 - AluSg/x SINE Alu -1 309 179 180 0 0 0 chr5 6064105 6064125 -193566025 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 227 323 43 0 chr5 6064133 6064226 -193565924 - MIR SINE MIR -110 152 56 297 287 33 47 chr5 6064495 6064645 -193565505 + MIR SINE MIR 91 238 -24 1217 241 177 9 chr5 6066192 6066656 -193563494 + MER74A LTR ERVL 1 542 -16 1519 126 13 4 chr5 6067140 6067378 -193562772 + L1MA2 LINE L1 6065 6304 0 201 39 0 0 chr5 6068332 6068358 -193561792 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2502 76 0 0 chr5 6069236 6069537 -193560613 + AluSc SINE Alu 1 301 -8 2145 126 0 3 chr5 6069857 6070158 -193559992 + AluSx SINE Alu 1 300 -12 744 273 10 10 chr5 6070255 6070464 -193559686 - LTR40a LTR ERVL -303 216 8 1475 178 7 40 chr5 6074057 6074360 -193555790 - L1MA7 LINE L1 -410 5881 5589 1903 180 35 20 chr5 6074360 6074757 -193555393 + L1MA7 LINE L1 5883 6288 -3 745 145 26 0 chr5 6074778 6074895 -193555255 + FRAM SINE Alu 37 156 -20 3168 198 20 37 chr5 6075544 6075789 -193554361 - L1MA9 LINE L1 -35 6277 6030 2335 99 0 0 chr5 6075789 6076082 -193554068 - AluSg1 SINE Alu -16 293 1 3168 198 20 37 chr5 6076082 6076573 -193553577 - L1MA9 LINE L1 -282 6030 5553 2857 195 90 12 chr5 6076569 6076914 -193553236 + L1M2 LINE L1 4589 4906 -1398 * 189 0 0 0 chr5 6076914 6076935 -193553215 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2857 195 90 12 chr5 6076935 6077506 -193552644 + L1M2 LINE L1 4906 5561 -743 27 0 0 0 chr5 6077608 6077635 -193552515 + AT_rich Low_complexity Low_complexity 1 27 0 280 301 19 0 chr5 6077773 6077876 -193552274 - L1ME3A LINE L1 -227 5943 5839 240 207 81 23 chr5 6078032 6078119 -193552031 + L1MC4 LINE L1 6612 6703 -1339 238 102 0 41 chr5 6078130 6078179 -193551971 + (TA)n Simple_repeat Simple_repeat 1 47 0 776 230 95 24 chr5 6078336 6078705 -193551445 - L1MC5 LINE L1 -225 7736 7342 245 206 24 40 chr5 6078710 6078751 -193551399 + (CATATA)n Simple_repeat Simple_repeat 6 46 -83 2075 148 52 56 chr5 6078751 6079198 -193550952 + MER65A LTR ERV1 1 445 0 245 206 24 40 chr5 6079198 6079282 -193550868 + (CATATA)n Simple_repeat Simple_repeat 46 129 0 1963 193 32 17 chr5 6079499 6079909 -193550241 + MLT2C2 LTR ERVL 1 416 -48 243 164 0 0 chr5 6079925 6079986 -193550164 + (CA)n Simple_repeat Simple_repeat 2 62 0 195 42 0 0 chr5 6080020 6080044 -193550106 + (TA)n Simple_repeat Simple_repeat 2 25 0 273 208 0 62 chr5 6080061 6080157 -193549993 + L1MC4 LINE L1 6614 6703 -1339 180 0 0 0 chr5 6080161 6080181 -193549969 + (GA)n Simple_repeat Simple_repeat 2 21 0 245 139 93 0 chr5 6080199 6080242 -193549908 + MLT2C2 LTR ERVL 472 518 -2 255 299 17 26 chr5 6081421 6081538 -193548612 + MIR SINE MIR 97 212 -50 1147 207 29 0 chr5 6081620 6081828 -193548322 + MER20 DNA MER1_type 6 219 0 8619 48 0 0 chr5 6084044 6085013 -193545137 - LTR5 LTR ERVK 0 969 1 1702 198 91 82 chr5 6085600 6086115 -193544035 - MLT2B1 LTR ERVL 0 520 1 929 245 54 51 chr5 6086649 6086980 -193543170 - MLT1E LTR MaLR -199 394 63 373 66 33 0 chr5 6087654 6087715 -193542435 + (TG)n Simple_repeat Simple_repeat 2 64 0 1713 226 6 43 chr5 6089121 6089535 -193540615 - L1ME1 LINE L1 -168 6067 5672 2178 82 43 0 chr5 6089535 6089814 -193540336 - AluY SINE Alu -5 306 16 1713 226 6 43 chr5 6089814 6089882 -193540268 - L1ME1 LINE L1 -563 5672 5603 1032 274 84 37 chr5 6089890 6090488 -193539662 - L1ME1 LINE L1 -2054 4161 3536 875 150 4 177 chr5 6090761 6091003 -193539147 + MER51C LTR ERV1 446 640 0 421 287 15 7 chr5 6091006 6091142 -193539008 - L1ME1 LINE L1 -2681 3534 3398 3902 185 62 6 chr5 6091146 6091952 -193538198 - L1MB2 LINE L1 -5 6166 5316 3328 262 56 30 chr5 6091944 6094694 -193535456 - L1ME1 LINE L1 -2797 3418 639 * 458 277 196 5 chr5 6094701 6094885 -193535265 + MER20 DNA MER1_type 1 219 0 1402 297 41 17 chr5 6094888 6095477 -193534673 - L1ME1 LINE L1 -5760 636 34 27 62 0 0 chr5 6095749 6095797 -193534353 + AT_rich Low_complexity Low_complexity 1 48 0 597 140 13 33 chr5 6097097 6097247 -193532903 + CT-rich Low_complexity Low_complexity 2 148 0 22 0 0 0 chr5 6097964 6097986 -193532164 + AT_rich Low_complexity Low_complexity 1 22 0 2290 131 41 16 chr5 6098292 6098658 -193531492 + THE1C LTR MaLR 1 375 0 7963 159 40 33 chr5 6098658 6100228 -193529922 + THE1C-int LTR MaLR 1 1580 0 2214 138 42 8 chr5 6100230 6100591 -193529559 + THE1C LTR MaLR 3 375 0 1131 225 14 0 chr5 6100851 6101073 -193529077 + AluJb SINE Alu 5 229 -83 1110 238 47 0 chr5 6102101 6102378 -193527772 - MER58B DNA MER1_type -6 335 46 395 303 117 7 chr5 6104544 6104825 -193525325 + MLT1J2 LTR MaLR 18 329 -121 277 300 0 0 chr5 6105814 6105894 -193524256 + (TG)n Simple_repeat Simple_repeat 2 81 0 1647 110 44 0 chr5 6106816 6107043 -193523107 - AluSg/x SINE Alu -4 306 70 644 211 172 16 chr5 6108656 6108912 -193521238 - MER69 DNA AcHobo -94 2432 2137 995 271 83 95 chr5 6108982 6109432 -193520718 - MER69B DNA AcHobo -1609 917 480 2242 109 0 10 chr5 6109432 6109735 -193520415 - AluSq SINE Alu -13 300 1 995 271 83 95 chr5 6109735 6110140 -193520010 - MER69B DNA AcHobo -2046 480 72 2479 67 0 7 chr5 6110623 6110923 -193519227 - AluY SINE Alu -13 298 1 2225 121 0 13 chr5 6110930 6111245 -193518905 - AluSq SINE Alu -1 312 2 22 0 0 0 chr5 6111421 6111443 -193518707 + AT_rich Low_complexity Low_complexity 1 22 0 223 249 73 0 chr5 6112778 6112870 -193517280 + MER5A DNA MER1_type 63 152 -26 261 0 0 0 chr5 6112942 6112971 -193517179 + (A)n Simple_repeat Simple_repeat 1 29 0 378 245 23 35 chr5 6113826 6113967 -193516183 + MIR SINE MIR 45 184 -63 2212 167 53 17 chr5 6114028 6114412 -193515738 - MSTA LTR MaLR 0 428 27 2955 63 115 5 chr5 6114412 6114771 -193515379 + MLT2A1 LTR ERVL 2 411 -33 905 90 0 8 chr5 6114771 6114905 -193515245 + (TCTA)n Simple_repeat Simple_repeat 3 135 0 2955 63 115 5 chr5 6114905 6114944 -193515206 + MLT2A1 LTR ERVL 411 444 0 2212 167 53 17 chr5 6114944 6114972 -193515178 - MSTA LTR MaLR -401 27 1 37743 93 13 7 chr5 6116248 6122402 -193507748 + L1PA6 LINE L1 11 6154 0 35 24 0 0 chr5 6122644 6122686 -193507464 + AT_rich Low_complexity Low_complexity 1 42 0 312 27 0 0 chr5 6122981 6123018 -193507132 + (TG)n Simple_repeat Simple_repeat 2 38 0 246 193 0 0 chr5 6123655 6123712 -193506438 + (CA)n Simple_repeat Simple_repeat 2 58 0 1520 257 38 16 chr5 6127410 6127861 -193502289 - LTR53 LTR ERVL -7 512 52 547 270 37 18 chr5 6128401 6128564 -193501586 + MIR SINE MIR 60 225 -37 775 267 115 33 chr5 6128605 6129032 -193501118 + MLT1C LTR MaLR 1 462 -5 191 214 0 71 chr5 6129134 6129190 -193500960 - L2 LINE L2 -5 3267 3216 229 189 0 0 chr5 6130144 6130181 -193499969 + MER81 DNA DNA 1 37 -77 238 301 0 0 chr5 6133118 6133191 -193496959 - MIR SINE MIR -129 133 61 2469 146 34 2 chr5 6134194 6134605 -193495545 + MSTA LTR MaLR 1 424 -4 650 242 159 5 chr5 6134853 6135267 -193494883 + MLT1G1 LTR MaLR 30 541 -49 1386 207 34 14 chr5 6135864 6136159 -193493991 + AluJb SINE Alu 1 301 -1 696 276 148 6 chr5 6138656 6138993 -193491157 - L1MC4 LINE L1 -151 7891 7507 2080 140 21 32 chr5 6139098 6139477 -193490673 - THE1C LTR MaLR 0 375 1 1527 196 145 0 chr5 6140958 6141310 -193488840 - MER57A LTR ERV1 0 403 1 320 44 0 0 chr5 6141348 6141393 -193488757 + AluSp/q SINE Alu 255 299 -4 519 219 0 47 chr5 6143292 6143420 -193486730 + MLT1A1 LTR MaLR 1 122 -243 1234 202 34 15 chr5 6143738 6144000 -193486150 + MLT1A1 LTR MaLR 99 365 0 5405 130 13 7 chr5 6144319 6145297 -193484853 - L1PA14 LINE L1 -66 6095 5112 1801 140 184 11 chr5 6145463 6145828 -193484322 + MSTA LTR MaLR 1 428 0 993 114 0 0 chr5 6145850 6145990 -193484160 + MSTA-int LTR MaLR 59 198 -1382 238 269 0 0 chr5 6145990 6146042 -193484108 + (TG)n Simple_repeat Simple_repeat 2 53 0 2488 159 33 28 chr5 6146342 6146801 -193483349 - MLT1C LTR MaLR -1 466 6 326 89 78 0 chr5 6146923 6147013 -193483137 + (TCTA)n Simple_repeat Simple_repeat 2 98 0 2356 106 0 6 chr5 6148294 6148606 -193481544 - AluSp SINE Alu -2 311 2 249 287 53 0 chr5 6149280 6149374 -193480776 + MIR SINE MIR 132 230 -32 21 95 0 0 chr5 6150093 6150156 -193479994 + AT_rich Low_complexity Low_complexity 1 63 0 240 291 57 70 chr5 6150170 6150277 -193479873 - L1P LINE L1 -2364 3782 3676 288 0 0 0 chr5 6150277 6150309 -193479841 + (TG)n Simple_repeat Simple_repeat 2 33 0 240 291 57 70 chr5 6150309 6150359 -193479791 - L1P LINE L1 -2470 3676 3627 2116 172 96 50 chr5 6202244 6202537 -193427613 - LTR48B LTR ERV1 -99 545 218 2433 83 0 3 chr5 6202537 6202849 -193427301 + AluY SINE Alu 1 311 0 2116 172 96 50 chr5 6202849 6203056 -193427094 - LTR48B LTR ERV1 -426 218 22 704 270 89 31 chr5 6203222 6203481 -193426669 + MLT1J LTR MaLR 39 312 -199 201 133 0 0 chr5 6204658 6204688 -193425462 + (GA)n Simple_repeat Simple_repeat 1 30 0 1366 131 66 0 chr5 6204720 6204918 -193425232 - AluJb SINE Alu -16 296 86 26 0 0 0 chr5 6204922 6204948 -193425202 + AT_rich Low_complexity Low_complexity 1 26 0 388 231 92 75 chr5 6205493 6205537 -193424613 - MIR SINE MIR -64 198 156 3365 160 34 0 chr5 6205537 6206073 -193424077 + MER41C LTR ERV1 1 554 0 388 231 92 75 chr5 6206073 6206201 -193423949 - MIR SINE MIR -106 156 23 5367 139 33 20 chr5 6207411 6208293 -193421857 + MER4D LTR ERV1 3 895 -8 660 111 0 0 chr5 6208588 6208687 -193421463 + (TA)n Simple_repeat Simple_repeat 2 100 0 2901 83 103 5 chr5 6208688 6209096 -193421054 + LTR7 LTR ERV1 1 448 -2 208 256 0 0 chr5 6209097 6209140 -193421010 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 329 161 11 75 chr5 6209297 6209390 -193420760 + L1MB4 LINE L1 6093 6179 -1 1040 153 38 169 chr5 6209571 6209843 -193420307 + L1MD3 LINE L1 7547 7759 -236 2236 75 0 0 chr5 6209843 6210121 -193420029 + AluY SINE Alu 26 303 -8 1040 153 38 169 chr5 6210121 6210220 -193419930 + L1MD3 LINE L1 7759 7869 -126 913 223 98 53 chr5 6210239 6210806 -193419344 - LTR48 LTR ERV1 -4 783 1 575 224 2 3 chr5 6210806 6210929 -193419221 + L1MD3 LINE L1 6240 6359 0 250 265 34 6 chr5 6211092 6211179 -193418971 + MIR SINE MIR 58 146 -62 1376 214 28 64 chr5 6211179 6211440 -193418710 - MLT1A2 LTR MaLR 0 374 130 1912 120 223 11 chr5 6211440 6211790 -193418360 - MSTA LTR MaLR -4 424 1 1376 214 28 64 chr5 6211790 6211916 -193418234 - MLT1A2 LTR MaLR -244 130 1 2237 167 46 21 chr5 6212852 6213369 -193416781 + MLT2A2 LTR ERVL 1 554 0 180 125 0 0 chr5 6216404 6216436 -193413714 + (TG)n Simple_repeat Simple_repeat 1 32 0 664 223 13 25 chr5 6216463 6216620 -193413530 - Tigger2 DNA MER2_type -16 2702 2548 * 866 173 46 20 chr5 6216596 6216793 -193413357 - Tigger2 DNA MER2_type -2509 209 8 885 150 44 12 chr5 6217063 6217223 -193412927 - L1MC2 LINE L1 -13 6331 6167 23 0 0 0 chr5 6218522 6218545 -193411605 + AT_rich Low_complexity Low_complexity 1 23 0 384 262 10 0 chr5 6218567 6218670 -193411480 + MER5B DNA MER1_type 1 104 -74 205 79 53 79 chr5 6218762 6218800 -193411350 - MER5A DNA MER1_type -152 37 1 602 195 109 35 chr5 6218821 6218995 -193411155 + MER5A DNA MER1_type 1 187 -2 2099 134 3 0 chr5 6220172 6220479 -193409671 - AluSx SINE Alu -4 308 1 305 196 0 0 chr5 6222003 6222059 -193408091 + L1MC4 LINE L1 6648 6703 -1339 22 0 0 0 chr5 6222492 6222514 -193407636 + AT_rich Low_complexity Low_complexity 1 22 0 1687 41 0 0 chr5 6223795 6223989 -193406161 + L1PA5 LINE L1 5957 6150 -4 24 32 0 0 chr5 6224035 6224066 -193406084 + AT_rich Low_complexity Low_complexity 1 31 0 358 235 99 0 chr5 6224306 6224387 -193405763 - MER117 DNA MER1_type -107 90 2 925 181 0 6 chr5 6224609 6224769 -193405381 - AluSg/x SINE Alu -38 272 114 636 174 36 36 chr5 6224880 6225018 -193405132 - AluSg/x SINE Alu -81 229 92 1695 244 17 3 chr5 6226986 6227346 -193402804 - MLT1A1 LTR MaLR 0 365 1 284 179 30 0 chr5 6227816 6227883 -193402267 + CT-rich Low_complexity Low_complexity 3 71 0 203 346 31 43 chr5 6228266 6228428 -193401722 - L2 LINE L2 -466 2848 2689 407 306 40 30 chr5 6228464 6228663 -193401487 - L1M4 LINE L1 -1104 5042 4842 292 166 5 242 chr5 6228898 6229109 -193401041 + MLT1H LTR MaLR 279 439 -110 1836 237 60 38 chr5 6229734 6230337 -193399813 - L1MC4 LINE L1 -248 7794 7179 615 301 116 42 chr5 6230368 6230826 -193399324 - LTR67 LTR ERVL -5 552 61 197 200 36 0 chr5 6230886 6230941 -193399209 + T-rich Low_complexity Low_complexity 5 61 0 262 291 0 38 chr5 6232423 6232502 -193397648 + CT-rich Low_complexity Low_complexity 2 77 0 466 336 33 22 chr5 6232762 6232979 -193397171 + MIR SINE MIR 3 226 -36 25 51 0 0 chr5 6234304 6234343 -193395807 + AT_rich Low_complexity Low_complexity 1 39 0 2199 105 0 3 chr5 6235765 6236060 -193394090 + AluSx SINE Alu 1 294 -18 1137 210 30 63 chr5 6236153 6236428 -193393722 + MER33 DNA MER1_type 3 267 -2318 2344 81 3 0 chr5 6236428 6236723 -193393427 - AluSp SINE Alu -17 296 1 1137 210 30 63 chr5 6236723 6236780 -193393370 + MER33 DNA MER1_type 267 324 0 186 226 83 60 chr5 6236984 6237068 -193393082 - MIR SINE MIR -140 122 37 194 279 0 0 chr5 6240255 6240298 -193389852 - MIR SINE MIR -109 153 111 189 74 0 0 chr5 6240354 6240381 -193389769 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 201 196 0 0 chr5 6240697 6240743 -193389407 + (TA)n Simple_repeat Simple_repeat 2 47 0 5446 112 15 19 chr5 6241218 6242046 -193388104 + L1PA13 LINE L1 5333 6162 -1 263 136 0 0 chr5 6242087 6242131 -193388019 - L1MA9 LINE L1 -35 6277 6234 445 152 15 38 chr5 6242202 6242334 -193387816 + CT-rich Low_complexity Low_complexity 2 130 0 401 206 10 0 chr5 6242437 6242534 -193387616 + CT-rich Low_complexity Low_complexity 3 100 0 358 197 0 0 chr5 6242534 6242600 -193387550 - L1MA8 LINE L1 -130 6161 6096 2232 301 140 23 chr5 6244209 6245706 -193384444 + L2 LINE L2 1382 3107 -206 2799 116 3 11 chr5 6245706 6246084 -193384066 + THE1C LTR MaLR 1 375 0 2232 301 140 23 chr5 6246084 6246309 -193383841 + L2 LINE L2 3107 3304 -9 358 200 16 96 chr5 6246370 6246495 -193383655 - MIR SINE MIR -138 124 10 206 208 73 135 chr5 6246504 6246535 -193383615 - L2 LINE L2 -49 3223 3192 2069 201 87 9 chr5 6246535 6246959 -193383191 - MSTB2 LTR MaLR 0 457 1 206 208 73 135 chr5 6246959 6247023 -193383127 - L2 LINE L2 -80 3192 3134 1752 247 49 27 chr5 6247258 6247747 -193382403 - MLT1D LTR MaLR 0 505 6 208 174 0 22 chr5 6248058 6248104 -193382046 + T-rich Low_complexity Low_complexity 3 47 0 2320 60 0 0 chr5 6248824 6249172 -193380978 - AluY SINE Alu 0 348 1 2278 107 0 0 chr5 6249242 6249541 -193380609 - AluY SINE Alu -12 299 1 208 282 212 33 chr5 6249566 6249807 -193380343 - L2 LINE L2 -529 2785 2502 26 93 0 0 chr5 6250477 6250552 -193379598 + AT_rich Low_complexity Low_complexity 1 75 0 1605 179 14 0 chr5 6250983 6251297 -193378853 - AluJb SINE Alu 0 318 1 276 404 45 0 chr5 6251521 6251744 -193378406 + ERVL LTR ERVL 4467 4699 -1065 1232 278 65 15 chr5 6252662 6253065 -193377085 + LTR16A LTR ERVL 25 447 -3 2046 128 24 40 chr5 6253807 6254181 -193375969 - THE1C LTR MaLR 0 375 8 14238 128 6 4 chr5 6254796 6257689 -193372461 - L1PA8A LINE L1 -6 6440 3544 776 150 13 0 chr5 6257800 6257953 -193372197 - L1PA8A LINE L1 -2962 3499 3345 * 6057 172 13 40 chr5 6257938 6259831 -193370319 - L1PA8A LINE L1 -4290 2171 259 763 198 16 101 chr5 6260065 6260313 -193369837 + LTR12 LTR ERV1 238 464 -250 1615 104 3 97 chr5 6260342 6260630 -193369520 - L1PA8A LINE L1 -5613 262 2 189 215 62 62 chr5 6261387 6261452 -193368698 - MIR SINE MIR -88 174 110 801 215 34 10 chr5 6261778 6261983 -193368167 - MLT1C LTR MaLR -251 216 7 22 35 0 0 chr5 6262898 6262927 -193367223 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 6263377 6263398 -193366752 + AT_rich Low_complexity Low_complexity 1 21 0 2034 147 3 3 chr5 6264564 6264864 -193365286 + AluJb SINE Alu 4 303 -9 2283 95 10 0 chr5 6266633 6266937 -193363213 + AluSp SINE Alu 1 307 -6 307 319 93 30 chr5 6267616 6267886 -193362264 + L3 LINE CR1 863 1149 -428 324 294 81 48 chr5 6268593 6268989 -193361161 + L2 LINE L2 2734 3139 -174 2247 105 0 25 chr5 6269491 6269805 -193360345 - AluSg SINE Alu -4 306 1 22 0 0 0 chr5 6270286 6270308 -193359842 + AT_rich Low_complexity Low_complexity 1 22 0 327 203 0 0 chr5 6271884 6271953 -193358197 + (TATATG)n Simple_repeat Simple_repeat 3 71 0 839 217 94 39 chr5 6272282 6272703 -193357447 - MLT1D LTR MaLR -4 501 21 1472 110 24 89 chr5 6273000 6273246 -193356904 - MER30 DNA MER1_type 0 230 1 1443 140 0 0 chr5 6273875 6274089 -193356061 + AluSg/x SINE Alu 84 297 -15 229 203 29 14 chr5 6274914 6274983 -193355167 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 562 310 125 48 chr5 6275979 6276649 -193353501 - L2 LINE L2 -30 3283 2567 2347 144 68 13 chr5 6277374 6277770 -193352380 - MSTB LTR MaLR 0 426 9 849 262 90 54 chr5 6277792 6278406 -193351744 + L1MEc LINE L1 827 1462 -4934 350 109 0 0 chr5 6278423 6278478 -193351672 + L1MA3 LINE L1 6250 6304 -1 346 226 19 19 chr5 6278640 6278746 -193351404 + L1M4 LINE L1 4802 4907 -1239 * 4685 208 32 23 chr5 6278737 6279152 -193350998 - L1MA10 LINE L1 0 6334 5924 2448 140 11 21 chr5 6279152 6279531 -193350619 - THE1C LTR MaLR 0 375 1 10170 125 12 73 chr5 6279531 6281212 -193348938 - THE1C-int LTR MaLR 0 1580 1 2195 174 13 16 chr5 6281217 6281591 -193348559 - THE1C LTR MaLR 0 375 3 4685 208 32 23 chr5 6281591 6283041 -193347109 - L1MA10 LINE L1 -413 5921 4438 1160 243 117 23 chr5 6283044 6283412 -193346738 + MSTD LTR MaLR 1 396 0 2383 192 17 28 chr5 6283419 6284345 -193345805 - L1PA7 LINE L1 -1031 5115 3757 * 6085 61 16 0 chr5 6284341 6285274 -193344876 + L1PA7 LINE L1 5092 6039 -115 1895 171 39 15 chr5 6285277 6285611 -193344539 + THE1B LTR MaLR 23 364 0 10762 106 24 35 chr5 6285612 6286111 -193344039 + THE1B-int LTR MaLR 2 505 -1075 2734 82 14 6 chr5 6286111 6286464 -193343686 + L1PA8A LINE L1 5776 6131 0 10762 106 24 35 chr5 6286464 6287560 -193342590 + THE1B-int LTR MaLR 505 1580 0 2080 144 57 28 chr5 6287560 6287914 -193342236 + THE1B LTR MaLR 1 364 0 408 272 159 46 chr5 6287920 6288203 -193341947 + L1M4 LINE L1 5046 5360 -786 254 218 0 0 chr5 6288205 6288260 -193341890 + L1MB7 LINE L1 2409 2463 -3921 5287 161 48 25 chr5 6288316 6289430 -193340720 + L1MA7 LINE L1 5153 6291 0 1721 221 28 101 chr5 6289439 6289697 -193340453 + L1MB7 LINE L1 4776 5051 -1331 306 87 0 0 chr5 6289697 6289743 -193340407 + (TA)n Simple_repeat Simple_repeat 2 47 0 1721 221 28 101 chr5 6289743 6290155 -193339995 + L1MB7 LINE L1 5051 5397 -985 3310 243 50 9 chr5 6290270 6291210 -193338940 + L1MB7 LINE L1 5432 6411 -9 428 0 19 0 chr5 6292017 6292069 -193338081 + (TG)n Simple_repeat Simple_repeat 2 54 0 221 309 37 0 chr5 6292775 6292856 -193337294 + L3 LINE CR1 1492 1575 -2 1416 230 69 34 chr5 6292930 6293372 -193336778 + MER31B LTR ERV1 3 657 -4 1047 213 58 5 chr5 6293372 6293525 -193336625 + MER20 DNA MER1_type 2 170 -49 234 62 0 0 chr5 6293525 6293557 -193336593 + (CA)n Simple_repeat Simple_repeat 1 32 0 1047 213 58 5 chr5 6293557 6293610 -193336540 + MER20 DNA MER1_type 170 219 0 358 252 106 31 chr5 6293786 6294047 -193336103 - MLT1J2 LTR MaLR -10 436 152 310 271 115 78 chr5 6295051 6295320 -193334830 - MLT1J2 LTR MaLR -65 385 107 1634 149 112 6 chr5 6295355 6295677 -193334473 - LTR18B LTR ERVL 0 614 259 1381 101 11 0 chr5 6295897 6296086 -193334064 - LTR18B LTR ERVL -423 191 1 270 292 42 0 chr5 6296086 6296177 -193333973 - MLT1J1 LTR MaLR -343 103 9 989 257 159 0 chr5 6297996 6298253 -193331897 - MER77 LTR ERV1 0 605 308 1064 232 62 77 chr5 6298371 6298707 -193331443 - MER77 LTR ERV1 -253 352 22 207 0 0 0 chr5 6299265 6299288 -193330862 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1762 158 36 4 chr5 6299560 6299839 -193330311 + AluJo SINE Alu 6 293 -19 1091 213 126 60 chr5 6300722 6300761 -193329389 - MLT2B1 LTR ERVL -1 413 378 255 61 0 0 chr5 6300761 6300794 -193329356 + (TG)n Simple_repeat Simple_repeat 1 33 0 1091 213 126 60 chr5 6300794 6301183 -193328967 - MLT2B1 LTR ERVL -36 378 1 264 312 8 48 chr5 6301965 6302090 -193328060 - L2 LINE L2 -13 3300 3181 528 265 139 0 chr5 6303665 6303831 -193326319 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr5 6304056 6304084 -193326066 + AT_rich Low_complexity Low_complexity 1 28 0 765 300 76 103 chr5 6305306 6305978 -193324172 + L3 LINE CR1 36 684 -893 5617 147 14 3 chr5 6305978 6307199 -193322951 + L1PA15 LINE L1 4933 6161 -4 765 300 76 103 chr5 6307199 6307339 -193322811 + L3 LINE CR1 684 826 -751 2408 161 48 22 chr5 6307402 6307819 -193322331 - MSTA LTR MaLR 0 428 1 332 285 46 39 chr5 6308154 6308284 -193321866 + L3 LINE CR1 1426 1556 -21 282 29 0 0 chr5 6308340 6308375 -193321775 + (CA)n Simple_repeat Simple_repeat 1 35 0 434 278 6 17 chr5 6311670 6311850 -193318300 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 210 333 7 20 chr5 6312246 6312396 -193317754 + (CATATA)n Simple_repeat Simple_repeat 3 150 0 275 29 0 0 chr5 6313561 6313596 -193316554 + L1PA6 LINE L1 6111 6145 -9 1983 145 0 23 chr5 6313628 6313932 -193316218 - AluSx SINE Alu -15 297 1 191 310 17 0 chr5 6314171 6314229 -193315921 + L2 LINE L2 3214 3272 0 1491 139 31 5 chr5 6314943 6315166 -193314984 + MER30 DNA MER1_type 2 230 0 180 273 0 0 chr5 6315921 6315987 -193314163 + CT-rich Low_complexity Low_complexity 4 69 0 199 361 48 30 chr5 6316315 6316481 -193313669 - L2 LINE L2 -428 2886 2718 246 326 181 7 chr5 6316483 6316621 -193313529 + L2 LINE L2 3152 3313 0 332 351 89 0 chr5 6317347 6317515 -193312635 + MIR SINE MIR 8 190 -72 208 315 126 16 chr5 6318000 6318127 -193312023 - MIR SINE MIR -59 203 63 339 285 164 15 chr5 6319060 6319234 -193310916 + MIR SINE MIR 45 241 -21 2117 104 0 44 chr5 6319389 6319707 -193310443 - AluSx SINE Alu -8 304 1 9362 238 84 22 chr5 6319826 6324631 -193305519 - L1MC3 LINE L1 -14 7771 2638 2144 139 7 3 chr5 6324631 6324941 -193305209 + AluSx SINE Alu 1 311 -1 9362 238 84 22 chr5 6324941 6325162 -193304988 - L1MC3 LINE L1 -5147 2638 2432 1282 260 100 91 chr5 6325195 6325575 -193304575 + MLT1E2 LTR MaLR 1 392 -234 1009 203 124 95 chr5 6325575 6326028 -193304122 + MER31B LTR ERV1 1 466 0 1282 260 100 91 chr5 6326028 6326155 -193303995 + MLT1E2 LTR MaLR 392 516 -110 213 39 0 0 chr5 6328442 6328468 -193301682 + (TG)n Simple_repeat Simple_repeat 2 27 0 507 173 9 27 chr5 6329445 6329555 -193300595 + MER67D LTR ERV1 1 108 -406 344 188 25 12 chr5 6329590 6329670 -193300480 + MER67D LTR ERV1 430 510 -4 2299 154 35 31 chr5 6330098 6330647 -193299503 + MLT2A2 LTR ERVL 1 554 0 225 0 0 0 chr5 6331551 6331576 -193298574 + (TC)n Simple_repeat Simple_repeat 2 26 0 1784 148 6 35 chr5 6332332 6332643 -193297507 + AluJb SINE Alu 1 302 -10 26 30 0 0 chr5 6332708 6332741 -193297409 + AT_rich Low_complexity Low_complexity 1 33 0 2182 110 0 26 chr5 6333033 6333342 -193296808 - AluSq SINE Alu -12 301 1 445 228 33 0 chr5 6334629 6334721 -193295429 - MLT1B LTR MaLR -32 358 264 1251 208 82 38 chr5 6334725 6335091 -193295059 + MLT1B LTR MaLR 6 387 -3 2479 63 0 3 chr5 6335879 6336178 -193293972 + AluY SINE Alu 1 298 -13 190 337 36 0 chr5 6339438 6339521 -193290629 + MIR SINE MIR 75 160 -102 260 229 18 119 chr5 6339610 6339719 -193290431 - MIR SINE MIR -7 255 158 831 115 0 65 chr5 6339719 6339858 -193290292 - AluSg/x SINE Alu -2 310 181 180 0 0 0 chr5 6339858 6339878 -193290272 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 254 323 43 0 chr5 6339886 6339979 -193290171 - MIR SINE MIR -110 152 56 297 253 20 67 chr5 6340244 6340398 -193289752 + MIR SINE MIR 87 238 -24 1195 244 177 9 chr5 6341990 6342454 -193287696 + MER74A LTR ERVL 1 542 -16 1519 126 13 4 chr5 6342938 6343176 -193286974 + L1MA2 LINE L1 6065 6304 0 201 39 0 0 chr5 6344130 6344156 -193285994 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2507 76 0 0 chr5 6345022 6345324 -193284826 + AluSc SINE Alu 1 302 -7 2145 126 0 3 chr5 6345644 6345945 -193284205 + AluSx SINE Alu 1 300 -12 744 273 10 10 chr5 6346042 6346251 -193283899 - LTR40a LTR ERVL -303 216 8 1475 178 7 40 chr5 6349844 6350147 -193280003 - L1MA7 LINE L1 -410 5881 5589 1903 180 35 20 chr5 6350147 6350544 -193279606 + L1MA7 LINE L1 5883 6288 -3 745 145 26 0 chr5 6350565 6350682 -193279468 + FRAM SINE Alu 37 156 -20 3168 198 20 37 chr5 6351331 6351576 -193278574 - L1MA9 LINE L1 -35 6277 6030 2335 99 0 0 chr5 6351576 6351869 -193278281 - AluSg1 SINE Alu -16 293 1 3168 198 20 37 chr5 6351869 6352360 -193277790 - L1MA9 LINE L1 -282 6030 5553 2857 195 90 12 chr5 6352356 6352701 -193277449 + L1M2 LINE L1 4589 4906 -1398 * 189 0 0 0 chr5 6352701 6352722 -193277428 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2857 195 90 12 chr5 6352722 6353293 -193276857 + L1M2 LINE L1 4906 5561 -743 27 0 0 0 chr5 6353395 6353422 -193276728 + AT_rich Low_complexity Low_complexity 1 27 0 280 301 19 0 chr5 6353560 6353663 -193276487 - L1ME3A LINE L1 -227 5943 5839 240 207 81 23 chr5 6353819 6353906 -193276244 + L1MC4 LINE L1 6612 6703 -1339 238 102 0 41 chr5 6353917 6353966 -193276184 + (TA)n Simple_repeat Simple_repeat 2 48 0 776 230 95 24 chr5 6354123 6354492 -193275658 - L1MC5 LINE L1 -225 7736 7342 245 206 24 40 chr5 6354497 6354538 -193275612 + (CATATA)n Simple_repeat Simple_repeat 6 46 -83 2075 148 52 56 chr5 6354538 6354985 -193275165 + MER65A LTR ERV1 1 445 0 245 206 24 40 chr5 6354985 6355069 -193275081 + (CATATA)n Simple_repeat Simple_repeat 46 129 0 1945 195 32 17 chr5 6355286 6355696 -193274454 + MLT2C2 LTR ERVL 1 416 -48 243 164 0 0 chr5 6355712 6355773 -193274377 + (CA)n Simple_repeat Simple_repeat 2 62 0 195 42 0 0 chr5 6355807 6355831 -193274319 + (TA)n Simple_repeat Simple_repeat 2 25 0 273 208 0 62 chr5 6355848 6355944 -193274206 + L1MC4 LINE L1 6614 6703 -1339 216 0 0 0 chr5 6355944 6355968 -193274182 + (GA)n Simple_repeat Simple_repeat 2 25 0 245 139 93 0 chr5 6355986 6356029 -193274121 + MLT2C2 LTR ERVL 472 518 -2 255 299 17 26 chr5 6357208 6357325 -193272825 + MIR SINE MIR 97 212 -50 1147 207 29 0 chr5 6357407 6357615 -193272535 + MER20 DNA MER1_type 6 219 0 8619 48 0 0 chr5 6359831 6360800 -193269350 - LTR5 LTR ERVK 0 969 1 1702 198 91 82 chr5 6361387 6361902 -193268248 - MLT2B1 LTR ERVL 0 520 1 369 352 44 57 chr5 6463400 6463784 -193166366 - L2 LINE L2 0 3272 2894 539 217 95 13 chr5 6464130 6464285 -193165865 - L1MD3 LINE L1 0 8040 7881 356 303 192 4 chr5 6464278 6464512 -193165638 - L1MC4 LINE L1 -191 7851 7574 * 418 207 36 45 chr5 6464545 6464590 -193165560 + MER20 DNA MER1_type 31 75 -144 2712 183 74 13 chr5 6464590 6465119 -193165031 - MER68 LTR ERV1 -1 561 1 418 207 36 45 chr5 6465119 6465184 -193164966 + MER20 DNA MER1_type 75 140 -79 1786 179 0 16 chr5 6465754 6466067 -193164083 + AluJo SINE Alu 3 310 -2 181 109 43 0 chr5 6466475 6466521 -193163629 + T-rich Low_complexity Low_complexity 3 50 0 819 254 96 35 chr5 6468991 6469467 -193160683 + MER110A LTR ERV1 1 486 0 1796 196 78 43 chr5 6469661 6470145 -193160005 + MLT1D LTR MaLR 2 502 -3 389 272 0 26 chr5 6470184 6470298 -193159852 + MIR SINE MIR 152 262 0 1818 166 103 70 chr5 6470827 6471273 -193158877 - MLT2C2 LTR ERVL 0 464 4 1768 185 0 3 chr5 6471406 6471714 -193158436 - AluJo SINE Alu -5 307 1 302 273 96 81 chr5 6474083 6474343 -193155807 - ERVL LTR ERVL -5148 616 353 703 153 14 49 chr5 6474663 6474807 -193155343 + L1MA7 LINE L1 5878 6016 -275 1360 126 18 22 chr5 6474807 6475027 -193155123 + L1PB4 LINE L1 5928 6149 -7 1248 178 36 14 chr5 6475027 6475298 -193154852 + L1MA7 LINE L1 6008 6288 -3 2376 97 3 0 chr5 6476162 6476460 -193153690 - AluSp SINE Alu -14 299 1 1015 169 0 0 chr5 6476510 6476658 -193153492 - AluJb SINE Alu -33 279 132 254 291 39 39 chr5 6476860 6476987 -193153163 + L2 LINE L2 3186 3312 -1 554 236 152 90 chr5 6477241 6477576 -193152574 + LTR18A LTR ERVL 1 356 -1 249 318 111 35 chr5 6477620 6477881 -193152269 + MLT1K LTR MaLR 99 379 -209 22 35 0 0 chr5 6478343 6478372 -193151778 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr5 6478415 6478438 -193151712 + (T)n Simple_repeat Simple_repeat 1 23 0 1097 211 126 38 chr5 6478603 6478673 -193151477 + MSTC LTR MaLR 10 72 -356 1936 149 3 31 chr5 6478673 6478995 -193151155 + AluSq SINE Alu 1 313 0 1097 211 126 38 chr5 6478995 6479241 -193150909 + MSTC LTR MaLR 72 354 -74 415 192 47 161 chr5 6479540 6479569 -193150581 - L1MD3 LINE L1 -168 5998 5967 791 194 6 6 chr5 6479569 6479734 -193150416 - L1MA10 LINE L1 0 6334 6170 415 192 47 161 chr5 6479734 6480130 -193150020 - L1MD3 LINE L1 -199 5967 5697 2099 142 3 0 chr5 6480130 6480426 -193149724 - AluSx SINE Alu -15 297 1 415 192 47 161 chr5 6480426 6480519 -193149631 - L1MD3 LINE L1 -469 5697 5595 6832 74 8 4 chr5 6480519 6482434 -193147716 + L1PA8 LINE L1 4310 6163 -9 615 200 100 6 chr5 6482476 6482636 -193147514 + L1ME LINE L1 5406 5580 -586 228 350 77 0 chr5 6482650 6482833 -193147317 + L2 LINE L2 2550 2746 -568 490 245 126 0 chr5 6485095 6485246 -193144904 + MER58C DNA MER1_type 46 215 0 312 127 0 0 chr5 6487229 6487284 -193142866 + (CGGGG)n Simple_repeat Simple_repeat 5 59 0 25 0 0 0 chr5 6487625 6487650 -193142500 + GC_rich Low_complexity Low_complexity 1 25 0 283 331 118 24 chr5 6488567 6488854 -193141296 - L2 LINE L2 -244 3069 2757 671 281 111 32 chr5 6489072 6489622 -193140528 - L2 LINE L2 -4 3309 2702 653 251 127 41 chr5 6489642 6489909 -193140241 + L2 LINE L2 2409 2698 -616 692 226 83 0 chr5 6489914 6490082 -193140068 - MER58B DNA MER1_type 0 341 160 2357 77 3 10 chr5 6490780 6491079 -193139071 + AluSg SINE Alu 1 297 -13 1384 140 26 0 chr5 6491481 6491709 -193138441 - MER50 LTR ERV1 -500 234 1 191 231 96 0 chr5 6491710 6491762 -193138388 + MIR3 SINE MIR 150 206 -2 462 18 0 0 chr5 6493788 6493843 -193136307 + (TG)n Simple_repeat Simple_repeat 2 56 0 1861 124 0 89 chr5 6495193 6495508 -193134642 + AluSx SINE Alu 26 312 0 2650 127 6 3 chr5 6495999 6496362 -193133788 + THE1B LTR MaLR 1 364 0 893 189 39 149 chr5 6497185 6497963 -193132187 + MER4C LTR ERV1 1 465 0 270 0 0 0 chr5 6499376 6499406 -193130744 + (CA)n Simple_repeat Simple_repeat 2 31 0 882 172 60 142 chr5 6500925 6501256 -193128894 + MLT1A1 LTR MaLR 20 323 -42 193 286 0 16 chr5 6501579 6501642 -193128508 + L2 LINE L2 2979 3040 -232 789 238 14 43 chr5 6501806 6502016 -193128134 + MER3 DNA MER1_type 6 209 0 360 321 42 31 chr5 6502418 6502611 -193127539 - L2 LINE L2 -497 2817 2623 2070 191 116 63 chr5 6504507 6505095 -193125055 + MLT1E3 LTR MaLR 1 619 -5 314 232 0 43 chr5 6505533 6505602 -193124548 - MER103 DNA DNA -78 88 23 257 282 64 18 chr5 6506153 6506263 -193123887 + L1M4 LINE L1 4741 4855 -1291 319 239 95 23 chr5 6506547 6506799 -193123351 + L1M1 LINE L1 5192 5479 -701 478 237 8 8 chr5 6507205 6507323 -193122827 + LTR37B LTR ERV1 351 468 0 2511 76 0 3 chr5 6507430 6507734 -193122416 + AluY SINE Alu 1 303 -8 910 237 28 14 chr5 6507800 6508015 -193122135 + MER20 DNA MER1_type 1 218 -1 617 222 6 56 chr5 6509537 6509699 -193120451 - MER20 DNA MER1_type -6 213 60 925 253 177 59 chr5 6510117 6510383 -193119767 + MLT1E LTR MaLR 25 258 -335 2215 117 40 69 chr5 6510383 6510758 -193119392 + THE1B LTR MaLR 1 364 0 925 253 177 59 chr5 6510758 6511000 -193119150 + MLT1E LTR MaLR 258 593 0 1129 262 26 12 chr5 6511150 6511493 -193118657 + MER90 LTR ERV1 29 376 -199 2040 163 46 37 chr5 6511500 6512054 -193118096 - MLT2A2 LTR ERVL 0 554 1 432 266 35 74 chr5 6512055 6512258 -193117892 + MER90 LTR ERV1 420 614 0 236 305 81 29 chr5 6513535 6513709 -193116441 + L1MEd LINE L1 999 1181 -4938 362 248 218 34 chr5 6514241 6514475 -193115675 - HAL1 LINE L1 -196 2311 2035 450 295 8 76 chr5 6514503 6514740 -193115410 - MIR SINE MIR -15 247 27 549 264 80 41 chr5 6515072 6515636 -193114514 - HAL1 LINE L1 -799 1708 1091 2848 193 72 23 chr5 6515640 6516325 -193113825 - L1MB7 LINE L1 -8 6176 5459 909 294 178 12 chr5 6516568 6517140 -193113010 - HAL1 LINE L1 -1727 780 114 775 146 33 33 chr5 6517243 6517394 -193112756 - MLT1C LTR MaLR -316 151 1 514 301 115 27 chr5 6517527 6518042 -193112108 + L1M4 LINE L1 3706 4265 -1881 330 278 124 43 chr5 6518379 6518588 -193111562 - L1MB7 LINE L1 -2267 5541 5316 242 287 101 23 chr5 6518615 6518744 -193111406 + L1ME LINE L1 5619 5757 -413 2198 103 40 0 chr5 6519277 6519577 -193110573 - AluSx SINE Alu 0 312 1 2423 102 30 24 chr5 6521599 6521972 -193108178 - THE1C LTR MaLR 0 375 1 186 138 35 0 chr5 6522853 6522882 -193107268 - L2 LINE L2 -100 3213 3184 303 180 0 0 chr5 6524153 6524203 -193105947 + Alu SINE Alu 1 50 -252 31 44 0 0 chr5 6524242 6524287 -193105863 + AT_rich Low_complexity Low_complexity 1 45 0 1040 150 0 72 chr5 6524346 6524539 -193105611 + AluJb SINE Alu 131 309 -3 221 328 90 25 chr5 6526116 6526238 -193103912 + MIR SINE MIR 23 152 -110 345 296 96 7 chr5 6526955 6527090 -193103060 + MIR SINE MIR 65 211 -51 203 302 47 0 chr5 6527121 6527227 -193102923 + (TATG)n Simple_repeat Simple_repeat 4 114 0 27 51 0 17 chr5 6528997 6529036 -193101114 + AT_rich Low_complexity Low_complexity 1 40 -18 1736 149 73 3 chr5 6529036 6529325 -193100825 - AluSx SINE Alu -3 309 1 27 51 0 17 chr5 6529325 6529344 -193100806 + AT_rich Low_complexity Low_complexity 40 58 0 1951 102 60 11 chr5 6529347 6529630 -193100520 - AluSx SINE Alu -15 297 1 1462 177 85 0 chr5 6529636 6529907 -193100243 - AluJo SINE Alu -18 294 1 1590 162 40 7 chr5 6529917 6530189 -193099961 - AluJb SINE Alu -23 289 9 25 31 0 0 chr5 6531803 6531835 -193098315 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 6532353 6532381 -193097769 + AT_rich Low_complexity Low_complexity 1 28 0 449 208 0 0 chr5 6633333 6633410 -192996740 + AluJb SINE Alu 173 249 -63 1398 156 7 60 chr5 6633446 6633715 -192996435 - AluJo SINE Alu -57 255 1 234 70 0 70 chr5 6633715 6633758 -192996392 + MSTA LTR MaLR 389 428 0 474 303 65 31 chr5 6633758 6634019 -192996131 - MLT1F-int LTR MaLR -770 601 332 810 193 35 18 chr5 6634084 6634255 -192995895 + FRAM SINE Alu 1 171 -5 290 239 146 15 chr5 6634263 6634393 -192995757 - MLT1F-int LTR MaLR -1221 150 4 897 204 86 9 chr5 6634405 6634626 -192995524 - MLT1F LTR MaLR 0 542 305 287 153 0 125 chr5 6634656 6634716 -192995434 - MLT1F LTR MaLR -328 239 188 201 108 0 0 chr5 6634716 6634753 -192995397 + (CA)n Simple_repeat Simple_repeat 2 38 0 287 153 0 125 chr5 6634753 6634764 -192995386 - MLT1F LTR MaLR -379 188 177 2212 107 50 50 chr5 6634829 6634927 -192995223 + THE1B LTR MaLR 1 98 -266 2255 112 0 3 chr5 6634927 6635223 -192994927 - AluSq SINE Alu -18 295 1 2212 107 50 50 chr5 6635223 6635488 -192994662 + THE1B LTR MaLR 97 364 0 375 212 24 0 chr5 6636718 6636803 -192993347 + MIR3 SINE MIR 73 159 -49 200 205 0 0 chr5 6637196 6637235 -192992915 + (CAT)n Simple_repeat Simple_repeat 1 39 0 1893 122 0 11 chr5 6637992 6638254 -192991896 - AluSx SINE Alu -53 259 1 966 258 46 40 chr5 6638310 6638659 -192991491 + L3 LINE CR1 1071 1421 -156 201 244 0 0 chr5 6639454 6639499 -192990651 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 23 68 0 0 chr5 6639522 6639566 -192990584 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr5 6639632 6639655 -192990495 + AT_rich Low_complexity Low_complexity 1 23 0 404 325 41 0 chr5 6641581 6641750 -192988400 + MIR3 SINE MIR 33 208 0 718 112 0 90 chr5 6641779 6641913 -192988237 - AluSx SINE Alu 0 309 188 994 106 0 8 chr5 6641924 6642056 -192988094 - AluSx SINE Alu -176 137 7 1351 190 58 48 chr5 6642135 6642514 -192987636 - MLT1C LTR MaLR 0 467 85 292 304 0 0 chr5 6642859 6642938 -192987212 - MIR SINE MIR -75 187 109 290 281 57 62 chr5 6643059 6643269 -192986881 - MIR SINE MIR -43 219 11 1582 58 43 14 chr5 6644182 6644390 -192985760 - AluSq SINE Alu -21 292 79 216 93 37 19 chr5 6644530 6644584 -192985566 + A-rich Low_complexity Low_complexity 4 58 0 201 339 0 34 chr5 6644612 6644789 -192985361 + A-rich Low_complexity Low_complexity 2 172 0 433 294 17 17 chr5 6644838 6645018 -192985132 + GA-rich Low_complexity Low_complexity 1 180 0 741 78 0 0 chr5 6645320 6645410 -192984740 + THE1C LTR MaLR 1 90 -285 1412 171 89 0 chr5 6645421 6645679 -192984471 + MER50 LTR ERV1 431 711 -23 1737 176 0 31 chr5 6646153 6646471 -192983679 - AluJb SINE Alu -4 308 1 283 293 53 30 chr5 6646572 6646705 -192983445 - MLT1I LTR MaLR -52 357 222 1456 116 61 101 chr5 6646812 6646982 -192983168 - MER39B LTR ERV1 -1 652 500 1717 153 30 0 chr5 6646982 6647250 -192982900 - AluJo SINE Alu -25 287 12 1456 116 61 101 chr5 6647250 6647406 -192982744 - MER39B LTR ERV1 -153 500 339 2599 21 3 52 chr5 6647888 6648215 -192981935 + AluY SINE Alu 1 311 0 340 310 113 18 chr5 6648229 6648458 -192981692 + L1MEd LINE L1 508 758 -5361 489 174 12 0 chr5 6648587 6648673 -192981477 - HY1 scRNA scRNA -25 87 1 1367 181 43 37 chr5 6648733 6649032 -192981118 - AluJb SINE Alu -9 303 3 2354 89 7 3 chr5 6649065 6649368 -192980782 + AluSq SINE Alu 1 304 -9 393 242 82 62 chr5 6649540 6649734 -192980416 + L1MEd LINE L1 2878 3075 -3054 1725 203 15 3 chr5 6649743 6650068 -192980082 - MLT1A1 LTR MaLR -1 364 36 290 279 169 0 chr5 6650089 6650243 -192979907 + L1M4 LINE L1 4664 4843 -1303 675 256 77 25 chr5 6650245 6650530 -192979620 - L2 LINE L2 0 3313 3014 2057 125 0 10 chr5 6650651 6650946 -192979204 + AluSx SINE Alu 12 303 -9 267 284 108 7 chr5 6651022 6651161 -192978989 + MIR SINE MIR 16 164 -63 34 24 0 0 chr5 6651262 6651303 -192978847 + AT_rich Low_complexity Low_complexity 1 41 0 27 29 0 0 chr5 6651825 6651859 -192978291 + AT_rich Low_complexity Low_complexity 1 34 0 2346 102 3 0 chr5 6652241 6652545 -192977605 - AluSc SINE Alu -4 305 1 302 33 7 7 chr5 6652784 6652835 -192977315 - MADE1 DNA Mariner 0 80 47 560 273 39 42 chr5 6652928 6653134 -192977016 - MIR SINE MIR -57 205 1 183 169 68 34 chr5 6653258 6653317 -192976833 - MIR SINE MIR -36 226 166 402 308 28 21 chr5 6654221 6654364 -192975786 - MIR3 SINE MIR -46 162 19 223 217 29 29 chr5 6654969 6655038 -192975112 + T-rich Low_complexity Low_complexity 4 72 0 2064 193 80 42 chr5 6656612 6657088 -192973062 + MER72 LTR ERV1 15 508 -214 1401 152 0 49 chr5 6657132 6657395 -192972755 + AluJo SINE Alu 37 286 -26 1446 157 0 4 chr5 6657416 6657646 -192972504 + MER72 LTR ERV1 494 722 0 708 162 0 0 chr5 6657693 6657792 -192972358 + AluJ/FLAM SINE Alu 2 100 -212 426 190 229 45 chr5 6657807 6657986 -192972164 - LTR37A LTR ERV1 -207 219 8 180 296 0 0 chr5 6658700 6658808 -192971342 + A-rich Low_complexity Low_complexity 1 108 0 2188 100 7 3 chr5 6660648 6660939 -192969211 - AluSx SINE Alu -20 292 1 182 273 18 18 chr5 6661414 6661469 -192968681 + MIR3 SINE MIR 10 64 -144 21 0 0 0 chr5 6661512 6661533 -192968617 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 6663144 6663167 -192966983 + AT_rich Low_complexity Low_complexity 1 23 0 1578 195 10 0 chr5 6664879 6665003 -192965147 + AluJb SINE Alu 3 124 -188 369 0 0 0 chr5 6665003 6665044 -192965106 + (CA)n Simple_repeat Simple_repeat 2 42 0 1578 195 10 0 chr5 6665044 6665211 -192964939 + AluJb SINE Alu 124 297 -15 2097 131 7 0 chr5 6665542 6665839 -192964311 + AluSx SINE Alu 2 300 -12 1918 119 0 48 chr5 6666230 6666541 -192963609 - AluSx SINE Alu -16 296 1 813 159 0 57 chr5 6666569 6666726 -192963424 - AluJo SINE Alu -154 158 11 211 267 0 0 chr5 6667538 6667583 -192962567 - L2 LINE L2 -8 3305 3261 208 234 0 21 chr5 6667659 6667706 -192962444 + CT-rich Low_complexity Low_complexity 3 48 0 666 232 53 2 chr5 6667727 6667885 -192962265 - MIR SINE MIR -44 164 2 411 298 68 12 chr5 6669002 6669163 -192960987 - MIR3 SINE MIR -1 207 38 1293 153 23 23 chr5 6669413 6669629 -192960521 + AluJb SINE Alu 1 216 -96 471 159 127 40 chr5 6669629 6669755 -192960395 + Charlie5 DNA MER1_type 2447 2583 -29 180 301 63 56 chr5 6669769 6669912 -192960238 - L2 LINE L2 -1321 1993 1850 2692 147 26 5 chr5 6671658 6672081 -192958069 + Tigger2a DNA MER2_type 2 433 -1 1996 145 3 20 chr5 6672494 6672797 -192957353 + AluJb SINE Alu 2 299 -13 403 153 0 0 chr5 6673960 6674019 -192956131 - Alu SINE Alu -16 296 238 2906 139 56 20 chr5 6674019 6674572 -192955578 + MER50 LTR ERV1 1 573 -161 2197 104 0 10 chr5 6674572 6674881 -192955269 - AluSx SINE Alu -6 306 1 1746 170 10 35 chr5 6675174 6675486 -192954664 - AluJb SINE Alu -8 304 1 652 154 0 0 chr5 6675918 6676022 -192954128 + AluJb SINE Alu 202 305 -7 631 115 0 21 chr5 6676537 6676633 -192953517 - FLAM_C SINE Alu -6 137 44 858 226 0 6 chr5 6678199 6678363 -192951787 + MER45A DNA AcHobo 1 163 -15 536 169 22 88 chr5 6680394 6680530 -192949620 + L2 LINE L2 2731 2857 -457 1737 93 115 33 chr5 6680533 6680803 -192949347 + LTR9 LTR ERV1 1 292 -320 1644 105 4 13 chr5 6680803 6681032 -192949118 - AluSx SINE Alu -85 227 1 668 188 150 0 chr5 6681032 6681165 -192948985 + MER2 DNA MER2_type 193 345 0 2001 129 3 7 chr5 6681190 6681477 -192948673 - AluSx SINE Alu -26 286 1 199 77 26 26 chr5 6682622 6682661 -192947489 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr5 6683305 6683327 -192946823 + AT_rich Low_complexity Low_complexity 1 22 0 255 316 40 0 chr5 6684642 6684718 -192945432 - MIR SINE MIR -100 108 30 1462 221 4 0 chr5 6685416 6685692 -192944458 + AluJo SINE Alu 22 298 -14 335 367 190 29 chr5 6686934 6687245 -192942905 + L2 LINE L2 2910 3270 -2 457 314 88 10 chr5 6687422 6687616 -192942534 + MIR SINE MIR 1 209 -53 390 208 94 10 chr5 6687693 6687789 -192942361 - L1MC2 LINE L1 -29 6315 6212 1844 144 39 10 chr5 6687832 6688138 -192942012 - MER2 DNA MER2_type 0 345 31 200 33 0 33 chr5 6691589 6691619 -192938531 + (CA)n Simple_repeat Simple_repeat 1 29 0 216 0 0 0 chr5 6694136 6694160 -192935990 + (A)n Simple_repeat Simple_repeat 1 24 0 2073 93 4 0 chr5 6694827 6695097 -192935053 + L1PA8 LINE L1 5902 6172 0 591 287 79 14 chr5 6697508 6697724 -192932426 - MIR SINE MIR -1 261 32 578 203 8 8 chr5 6698695 6698813 -192931337 + L2 LINE L2 2680 2797 -517 289 210 37 0 chr5 6698849 6698930 -192931220 + (TA)n Simple_repeat Simple_repeat 2 85 0 436 81 0 40 chr5 6698947 6699021 -192931129 + MADE1 DNA Mariner 10 80 0 583 307 58 19 chr5 6699046 6699251 -192930899 + L2 LINE L2 2851 3063 -250 1673 134 0 0 chr5 6699582 6699814 -192930336 - AluSx SINE Alu -80 232 1 2155 116 0 0 chr5 6700355 6700649 -192929501 - AluSx SINE Alu -18 294 1 1684 180 3 10 chr5 6700798 6701093 -192929057 - AluJo SINE Alu -19 293 1 2288 96 0 0 chr5 6701457 6701750 -192928400 + AluSx SINE Alu 1 293 -19 1901 152 13 3 chr5 6702080 6702383 -192927767 + AluJb SINE Alu 1 306 -6 2368 84 0 3 chr5 6702391 6702687 -192927463 + AluSg SINE Alu 3 297 -13 315 313 61 0 chr5 6705459 6705558 -192924592 + L2 LINE L2 3159 3263 -9 1435 198 55 32 chr5 6706905 6707253 -192922897 + MLT1A2 LTR MaLR 1 356 -18 270 194 0 0 chr5 6709865 6709927 -192920223 + (TGAA)n Simple_repeat Simple_repeat 1 62 0 4757 70 20 2 chr5 6709986 6710598 -192919552 + L1PA8A LINE L1 5482 6104 -27 1722 153 10 27 chr5 6710714 6711008 -192919142 + AluJb SINE Alu 1 289 -23 215 40 60 20 chr5 6712125 6712175 -192917975 + (CA)n Simple_repeat Simple_repeat 2 53 0 189 0 0 0 chr5 6713137 6713158 -192916992 + (A)n Simple_repeat Simple_repeat 1 21 0 288 0 0 0 chr5 6713965 6713997 -192916153 + (A)n Simple_repeat Simple_repeat 1 32 0 22 56 0 0 chr5 6716012 6716048 -192914102 + AT_rich Low_complexity Low_complexity 1 36 0 1570 199 14 0 chr5 6716048 6716334 -192913816 - AluJo SINE Alu -22 290 1 2221 146 37 0 chr5 6717241 6717590 -192912560 + MER47A DNA MER2_type 5 366 0 1854 169 3 13 chr5 6717794 6717976 -192912174 - AluJo SINE Alu -1 311 132 2254 105 7 0 chr5 6717976 6718272 -192911878 - AluSg SINE Alu -12 298 1 1854 169 3 13 chr5 6718272 6718403 -192911747 - AluJo SINE Alu -180 132 1 2207 125 0 3 chr5 6718491 6718796 -192911354 - AluJb SINE Alu 0 312 9 243 232 295 11 chr5 6718876 6718971 -192911179 - MIR SINE MIR -55 153 32 1396 112 66 2 chr5 6719967 6720203 -192909947 + L1PB3 LINE L1 5663 5908 -246 182 279 127 0 chr5 6720335 6720414 -192909736 - MIR SINE MIR -130 132 44 2362 108 0 13 chr5 6721322 6721638 -192908512 + AluSx SINE Alu 1 312 0 1127 209 158 73 chr5 6724008 6724515 -192905635 - MLT1F1 LTR MaLR -23 544 1 2226 106 7 3 chr5 6727373 6727674 -192902476 - AluSq SINE Alu -11 302 1 452 314 64 29 chr5 6727745 6727949 -192902201 + Charlie8 DNA MER1_type 4 214 -2203 474 18 0 0 chr5 6729849 6729904 -192900246 + (TA)n Simple_repeat Simple_repeat 1 55 0 2274 89 0 7 chr5 6729904 6730196 -192899954 - AluSq SINE Alu -21 292 3 960 184 128 28 chr5 6730200 6730450 -192899700 + MSTB1 LTR MaLR 156 430 -2 351 141 109 0 chr5 6731232 6731296 -192898854 - MER50 LTR ERV1 -663 71 1 275 238 60 24 chr5 6731889 6731973 -192898177 + MLT1L LTR MaLR 527 613 -2 2944 101 0 5 chr5 6732159 6732536 -192897614 - THE1C LTR MaLR 0 375 1 954 216 96 96 chr5 6733068 6733536 -192896614 - LTR34 LTR ERV1 -4 695 136 425 180 72 18 chr5 6733614 6733725 -192896425 - MER4A LTR ERV1 -547 117 1 353 261 45 9 chr5 6733827 6733938 -192896212 + Charlie5 DNA MER1_type 34 148 -2464 2256 99 10 0 chr5 6733940 6734242 -192895908 + AluSx SINE Alu 1 305 -7 2418 183 56 42 chr5 6734248 6734603 -192895547 + Charlie5 DNA MER1_type 1975 2343 -281 2163 126 10 0 chr5 6734603 6734905 -192895245 - AluSx SINE Alu -7 305 1 2418 183 56 42 chr5 6734905 6735161 -192894989 + Charlie5 DNA MER1_type 2343 2594 -30 223 217 0 0 chr5 6735645 6735691 -192894459 - MIR SINE MIR -115 147 102 4795 161 48 9 chr5 6735695 6736557 -192893593 - MER54A LTR ERVL -6 895 1 729 234 52 16 chr5 6740639 6740831 -192889319 - MER113 DNA MER1_type? -54 467 269 472 220 43 14 chr5 6740887 6741028 -192889122 - MER113 DNA MER1_type? -371 150 6 21 0 0 0 chr5 6742293 6742314 -192887836 + AT_rich Low_complexity Low_complexity 1 21 0 2102 98 3 10 chr5 6742497 6742792 -192887358 + AluSq SINE Alu 2 294 -19 309 51 0 0 chr5 6744123 6744162 -192885988 + (T)n Simple_repeat Simple_repeat 1 39 0 594 217 14 29 chr5 6744162 6744300 -192885850 + MIR SINE MIR 18 153 -109 890 239 71 0 chr5 6748267 6748496 -192881654 - MIR SINE MIR -10 252 8 2103 112 10 0 chr5 6749538 6749842 -192880308 - AluSx SINE Alu -1 311 5 528 168 84 8 chr5 6749944 6750075 -192880075 + LTR37A LTR ERV1 286 426 0 273 302 9 35 chr5 6750336 6750452 -192879698 + G-rich Low_complexity Low_complexity 3 115 0 444 259 5 53 chr5 6751827 6752016 -192878134 + GA-rich Low_complexity Low_complexity 1 180 0 873 163 7 13 chr5 6752167 6752363 -192877787 - FRAM SINE Alu 0 176 1 2179 105 0 22 chr5 6752368 6752683 -192877467 - AluSx SINE Alu -4 308 1 482 208 10 10 chr5 6752810 6752906 -192877244 - MLT2F LTR ERVL -567 96 1 1287 131 149 62 chr5 6752948 6753244 -192876906 + MLT1A1 LTR MaLR 1 332 -33 1957 121 0 0 chr5 6753244 6753560 -192876590 - AluSx SINE Alu 0 316 1 1287 131 149 62 chr5 6753560 6753598 -192876552 + MLT1A1 LTR MaLR 332 365 0 1079 134 31 76 chr5 6753803 6754026 -192876124 - AluJb SINE Alu -14 298 86 363 248 35 91 chr5 6754755 6754899 -192875251 - L1MC4 LINE L1 0 8042 7806 311 266 215 63 chr5 6755384 6755700 -192874450 + L2 LINE L2 2909 3272 0 414 267 82 30 chr5 6755944 6756079 -192874071 + L2 LINE L2 3123 3264 -8 1881 127 3 7 chr5 6756916 6757208 -192872942 - AluSg SINE Alu -19 291 1 1916 137 10 0 chr5 6757395 6757688 -192872462 - AluSx SINE Alu -16 296 1 2510 186 21 13 chr5 6757992 6758460 -192871690 + MER70A LTR ERVL 1 472 0 552 239 0 0 chr5 6758467 6758612 -192871538 - FLAM_A SINE Alu 0 145 1 186 133 0 0 chr5 6759519 6759549 -192870601 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2060 101 4 0 chr5 6759549 6759826 -192870324 - AluSq SINE Alu -33 280 3 322 286 60 65 chr5 6759931 6760062 -192870088 + L1MC4a LINE L1 6056 6187 -1621 2010 117 0 7 chr5 6760062 6760352 -192869798 - AluSx SINE Alu -24 288 1 322 286 60 65 chr5 6760352 6760388 -192869762 + L1MC4a LINE L1 6187 6222 -1586 2142 79 21 0 chr5 6760934 6761224 -192868926 + AluSx SINE Alu 1 296 -16 189 0 0 0 chr5 6761751 6761772 -192868378 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 655 244 77 0 chr5 6762034 6762202 -192867948 - MIR SINE MIR -71 191 11 3888 141 106 83 chr5 6762281 6763310 -192866840 + pTR5 LTR ERV1 742 2025 -413 410 185 34 27 chr5 6763310 6763421 -192866729 + LTR30 LTR ERV1 375 642 -80 2199 115 3 0 chr5 6763421 6763734 -192866416 + pTR5 LTR ERV1 79 392 -2046 181 351 54 27 chr5 6763785 6763896 -192866254 - L2 LINE L2 0 3313 3200 2044 92 28 57 chr5 6764265 6764582 -192865568 + AluSq SINE Alu 6 313 0 1754 164 28 104 chr5 6765886 6766143 -192864007 - MER45B DNA AcHobo -543 1038 832 2177 97 0 0 chr5 6766143 6766431 -192863719 - AluSx SINE Alu -24 288 1 1754 164 28 104 chr5 6766431 6766642 -192863508 - MER45B DNA AcHobo -749 832 606 1243 256 93 0 chr5 6766660 6766961 -192863189 - MER45B DNA AcHobo -711 329 1 531 31 0 0 chr5 6767162 6767227 -192862923 + (TATG)n Simple_repeat Simple_repeat 4 68 0 793 231 61 47 chr5 6768899 6769111 -192861039 + MIR SINE MIR 48 262 0 4315 124 15 126 chr5 6770806 6771730 -192858420 - LTR12 LTR ERV1 0 826 5 3071 155 18 26 chr5 6771746 6772354 -192857796 - pTR5 LTR ERV1 -1094 1344 742 875 198 6 0 chr5 6774242 6774414 -192855736 - FRAM SINE Alu -3 173 1 874 202 97 11 chr5 6774425 6774692 -192855458 + Charlie1b DNA MER1_type 109 398 -125 709 252 52 0 chr5 6775310 6775465 -192854685 - AluJo SINE Alu -137 175 13 2192 99 74 42 chr5 6775636 6775989 -192854161 + THE1B LTR MaLR 1 364 0 234 282 221 38 chr5 6775989 6776120 -192854030 - MIR SINE MIR -25 237 83 911 182 6 0 chr5 6776280 6776439 -192853711 + AluJb SINE Alu 138 297 -15 180 264 104 19 chr5 6776447 6776553 -192853597 + MIR SINE MIR 148 262 0 1752 182 29 45 chr5 6776585 6776825 -192853325 - L1MB8 LINE L1 -1 6177 5946 1915 117 3 43 chr5 6776825 6777150 -192853000 + AluSx SINE Alu 1 312 0 1752 182 29 45 chr5 6777150 6777338 -192852812 - L1MB8 LINE L1 -232 5946 5757 1595 143 4 19 chr5 6778031 6778289 -192851861 - AluJo SINE Alu -25 287 34 818 128 15 0 chr5 6779238 6779371 -192850779 - FRAM SINE Alu -24 152 18 1575 117 58 21 chr5 6779669 6779960 -192850190 + AluSx SINE Alu 2 303 -9 210 200 40 0 chr5 6779992 6780042 -192850108 + MIR SINE MIR 67 118 -144 604 243 47 42 chr5 6780054 6780268 -192849882 - MIR SINE MIR -30 232 18 333 0 0 0 chr5 6780575 6780612 -192849538 + (A)n Simple_repeat Simple_repeat 1 37 0 207 260 26 39 chr5 6781744 6781821 -192848329 - L2 LINE L2 -333 2980 2905 286 185 19 0 chr5 6782756 6782810 -192847340 - MER20 DNA MER1_type -6 213 159 1214 122 0 0 chr5 6783129 6783309 -192846841 + AluSg/x SINE Alu 120 299 -13 24 0 0 0 chr5 6783599 6783623 -192846527 + AT_rich Low_complexity Low_complexity 1 24 0 1841 115 10 20 chr5 6783721 6784017 -192846133 + AluSx SINE Alu 1 293 -19 667 152 27 0 chr5 6784097 6784209 -192845941 - FLAM_A SINE Alu -8 134 20 469 177 0 0 chr5 6784364 6784443 -192845707 - MER2 DNA MER2_type -266 79 1 257 167 0 0 chr5 6784444 6784486 -192845664 - MER2 DNA MER2_type -303 42 1 234 267 133 0 chr5 6784529 6784619 -192845531 + MIR SINE MIR 113 214 -48 1575 129 4 0 chr5 6785490 6785722 -192844428 - AluSq SINE Alu -14 299 67 447 208 50 0 chr5 6786009 6786110 -192844040 - MLT1H LTR MaLR 0 549 444 * 894 227 30 47 chr5 6786092 6786402 -192843748 - MLT1H LTR MaLR -248 307 30 199 217 0 0 chr5 6787132 6787178 -192842972 + L2 LINE L2 2911 2956 -316 226 333 0 0 chr5 6788325 6788397 -192841753 + L2 LINE L2 2902 2973 -299 2237 196 52 5 chr5 6788799 6789243 -192840907 + L1MB7 LINE L1 5579 6043 -141 1851 101 7 35 chr5 6789395 6789704 -192840446 - AluY SINE Alu 0 305 5 29 47 0 0 chr5 6790823 6790866 -192839284 + AT_rich Low_complexity Low_complexity 1 43 0 2083 186 38 53 chr5 6790866 6790989 -192839161 + MLT1D LTR MaLR 1 124 -381 2009 101 10 10 chr5 6790989 6791009 -192839141 - AluSx SINE Alu -13 299 280 189 0 0 0 chr5 6791009 6791030 -192839120 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2009 101 10 10 chr5 6791030 6791307 -192838843 - AluSx SINE Alu -31 281 2 2083 186 38 53 chr5 6791307 6791688 -192838462 + MLT1D LTR MaLR 124 497 -8 967 242 54 0 chr5 6791872 6792095 -192838055 + L1MC4 LINE L1 6800 7034 -1008 1146 156 0 0 chr5 6792108 6792281 -192837869 - AluSq SINE Alu -140 173 1 2037 226 66 20 chr5 6792314 6792907 -192837243 + L1MC4 LINE L1 7043 7662 -380 192 40 0 0 chr5 6792925 6792950 -192837200 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 291 227 93 0 chr5 6792953 6793028 -192837122 + L1MB4 LINE L1 5812 5893 -278 1381 149 149 15 chr5 6793028 6793289 -192836861 + AluJb SINE Alu 2 297 -5 2236 104 0 0 chr5 6793291 6793598 -192836552 + AluSx SINE Alu 3 309 -3 1410 160 73 7 chr5 6793607 6793895 -192836255 + L1MB4 LINE L1 5873 6179 -1 603 170 0 0 chr5 6793937 6794043 -192836107 + L1MC4 LINE L1 7709 7814 -228 763 67 38 0 chr5 6794044 6794149 -192836001 + HY1 scRNA scRNA 2 110 -2 1434 126 29 17 chr5 6794266 6794504 -192835646 + AluSx SINE Alu 61 301 -11 744 218 175 26 chr5 6794889 6795197 -192834953 - L1MC4 LINE L1 -5 8037 7684 2211 99 0 0 chr5 6795200 6795493 -192834657 + AluSg1 SINE Alu 1 293 -16 324 0 0 0 chr5 6795672 6795708 -192834442 + (CA)n Simple_repeat Simple_repeat 2 37 0 1458 150 59 31 chr5 6795756 6795878 -192834272 + AluJb SINE Alu 1 118 -194 183 42 0 0 chr5 6795878 6795902 -192834248 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1458 150 59 31 chr5 6795902 6796066 -192834084 + AluJb SINE Alu 118 295 -17 282 268 65 89 chr5 6796243 6796489 -192833661 + MLT1K LTR MaLR 189 428 -160 232 222 11 78 chr5 6796600 6796690 -192833460 + MIR SINE MIR 179 262 0 817 165 0 122 chr5 6797149 6797337 -192832813 + FRAM SINE Alu 1 165 -1 658 113 0 0 chr5 6797251 6797348 -192832802 + AluJ/FRAM SINE Alu 216 312 0 193 93 0 47 chr5 6798547 6798590 -192831560 + (TCTCCC)n Simple_repeat Simple_repeat 3 43 0 30 77 0 0 chr5 6798911 6798976 -192831174 + GC_rich Low_complexity Low_complexity 1 65 0 379 292 99 5 chr5 6799801 6799993 -192830157 - MIR SINE MIR -52 210 1 596 281 101 0 chr5 6800430 6800647 -192829503 - MIR SINE MIR -6 256 18 617 0 14 0 chr5 6801147 6801220 -192828930 + (TTTTA)n Simple_repeat Simple_repeat 2 75 0 2140 117 0 0 chr5 6801222 6801504 -192828646 - AluSx SINE Alu -30 282 1 22 0 0 0 chr5 6801516 6801538 -192828612 + AT_rich Low_complexity Low_complexity 1 22 0 187 226 151 0 chr5 6801900 6801953 -192828197 - MIR3 SINE MIR -21 187 127 21 0 0 0 chr5 6802022 6802043 -192828107 + AT_rich Low_complexity Low_complexity 1 21 0 721 216 57 173 chr5 6802531 6802775 -192827375 - L2 LINE L2 0 3313 3042 635 39 0 0 chr5 6802775 6802853 -192827297 - AluY SINE Alu -11 301 224 721 216 57 173 chr5 6802853 6803194 -192826956 - L2 LINE L2 -271 3042 2709 23 0 0 0 chr5 6903459 6903482 -192726668 + AT_rich Low_complexity Low_complexity 1 23 0 279 312 78 7 chr5 6903501 6903655 -192726495 + MIR SINE MIR 20 184 -78 1148 268 134 5 chr5 6905164 6905574 -192724576 + Charlie1a DNA MER1_type 60 522 -933 2541 255 90 25 chr5 6906540 6907528 -192722622 - L1MC4a LINE L1 -35 7773 6722 258 260 65 32 chr5 6909137 6909260 -192720890 - L2 LINE L2 -25 3288 3162 1944 73 11 11 chr5 6909708 6909968 -192720182 - AluY SINE Alu -14 297 38 530 102 0 11 chr5 6910068 6910156 -192719994 + (GGAA)n Simple_repeat Simple_repeat 1 87 0 297 229 57 0 chr5 6910943 6911013 -192719137 + MER5A DNA MER1_type 45 118 -71 370 274 12 41 chr5 6911948 6912158 -192717992 + GA-rich Low_complexity Low_complexity 1 203 0 238 345 9 9 chr5 6912191 6912301 -192717849 + GA-rich Low_complexity Low_complexity 1 110 0 329 243 22 44 chr5 6912412 6912548 -192717602 + CT-rich Low_complexity Low_complexity 5 137 0 498 149 0 0 chr5 6912586 6912673 -192717477 + (T)n Simple_repeat Simple_repeat 1 87 0 222 237 0 82 chr5 6912742 6912839 -192717311 + C-rich Low_complexity Low_complexity 3 91 0 2191 109 13 3 chr5 6916477 6916779 -192713371 + AluSx SINE Alu 1 305 -7 2103 106 0 4 chr5 6918549 6918824 -192711326 - AluSg SINE Alu -19 291 18 762 276 61 82 chr5 6919226 6919882 -192710268 + L1MEd LINE L1 457 1098 -5021 1973 188 55 65 chr5 6920470 6920975 -192709175 + MLT2B3 LTR ERVL 1 500 -54 195 175 0 0 chr5 6920978 6921035 -192709115 + A-rich Low_complexity Low_complexity 1 57 0 398 121 0 30 chr5 6921036 6921102 -192709048 + MLT2A2 LTR ERVL 390 453 0 863 236 62 126 chr5 6922064 6922900 -192707250 + L1MCa LINE L1 854 1851 -4756 * 1632 192 60 6 chr5 6922889 6923238 -192706912 + L1MD1 LINE L1 5875 6242 0 313 197 0 15 chr5 6923373 6923439 -192706711 + Charlie1b DNA MER1_type 410 474 -49 233 291 0 0 chr5 6923791 6923846 -192706304 - MIR SINE MIR -113 149 95 196 352 28 0 chr5 6924922 6924993 -192705157 + MIR SINE MIR 54 126 -82 2336 80 0 22 chr5 6925278 6925591 -192704559 + AluSp SINE Alu 1 306 -7 342 0 0 0 chr5 6925764 6925802 -192704348 + (TG)n Simple_repeat Simple_repeat 2 39 0 1552 217 45 12 chr5 6926567 6926904 -192703246 - MER7A DNA MER2_type 0 346 1 284 341 11 21 chr5 6926966 6927084 -192703066 + MER5B DNA MER1_type 65 174 -4 2555 55 7 0 chr5 6928031 6928340 -192701810 + AluY SINE Alu 1 311 0 238 277 175 15 chr5 6928349 6928486 -192701664 + L3 LINE CR1 1226 1384 -193 15203 86 26 3 chr5 6928488 6931415 -192698735 - L1PA8 LINE L1 -20 6152 3161 216 111 0 0 chr5 6931497 6931533 -192698617 + (TAAAAA)n Simple_repeat Simple_repeat 2 37 0 184 275 0 0 chr5 6931587 6931627 -192698523 + L3b LINE CR1 1531 1570 -13 2323 194 26 7 chr5 6931748 6932165 -192697985 + MSTB LTR MaLR 2 426 0 186 317 0 0 chr5 6932854 6932914 -192697236 - MIR SINE MIR -146 116 57 828 174 95 26 chr5 6933868 6934058 -192696092 - MER105 DNA DNA -1 203 1 297 272 184 53 chr5 6934134 6934340 -192695810 - L2 LINE L2 -5 3308 3076 2521 76 0 0 chr5 6934344 6934648 -192695502 - AluY SINE Alu -7 304 1 23 78 0 0 chr5 6935334 6935385 -192694765 + AT_rich Low_complexity Low_complexity 1 51 0 847 258 125 31 chr5 6935402 6935786 -192694364 - L1MC4 LINE L1 -2096 5946 5527 215 233 0 0 chr5 6938191 6938234 -192691916 - L2 LINE L2 -1727 1587 1545 183 326 22 34 chr5 6938539 6938628 -192691522 - L2 LINE L2 -352 2962 2875 327 262 119 9 chr5 6946550 6946821 -192683329 - L1MEd LINE L1 -4862 1208 916 226 254 91 73 chr5 6946913 6947133 -192683017 - L1MEd LINE L1 -5291 779 556 393 336 54 21 chr5 6948126 6948367 -192681783 - MIR SINE MIR -12 250 2 2184 177 3 0 chr5 6948670 6949014 -192681136 + MER7A DNA MER2_type 4 346 0 570 158 61 0 chr5 6949018 6949132 -192681018 + MLT2D LTR ERVL 1 121 -293 5331 165 30 24 chr5 6949134 6950394 -192679756 + L1MA7 LINE L1 5020 6286 -5 1394 157 15 168 chr5 6950408 6950688 -192679462 + MLT2D LTR ERVL 111 335 -62 261 0 0 0 chr5 6950688 6950717 -192679433 + (TG)n Simple_repeat Simple_repeat 2 30 0 1394 157 15 168 chr5 6950717 6950770 -192679380 + MLT2D LTR ERVL 335 394 -3 259 366 43 6 chr5 6951702 6951866 -192678284 - MIR SINE MIR -26 236 67 933 240 4 39 chr5 6951927 6952156 -192677994 - MER58A DNA MER1_type 0 224 4 241 167 0 42 chr5 6952364 6952412 -192677738 - MSTB LTR MaLR 0 426 381 1355 106 21 0 chr5 6952412 6952600 -192677550 - THE1C-int LTR MaLR -498 1082 891 544 126 0 23 chr5 6952574 6952661 -192677489 - THE1C-int LTR MaLR -1492 88 4 * 1831 151 46 40 chr5 6952667 6953038 -192677112 - THE1C LTR MaLR -2 373 1 1672 117 19 30 chr5 6953973 6954280 -192675870 - AluSq SINE Alu 0 327 24 1657 85 35 4 chr5 6954599 6954858 -192675292 - AluY SINE Alu -22 289 23 1578 151 68 0 chr5 6955334 6955613 -192674537 + Tigger2 DNA MER2_type 2418 2715 -3 603 238 72 18 chr5 6955665 6955888 -192674262 + L1ME2 LINE L1 4929 5163 -983 904 188 4 2 chr5 6955894 6956140 -192674010 + AluJb SINE Alu 2 295 -17 1387 256 45 8 chr5 6956143 6956662 -192673488 + L1ME2 LINE L1 5170 5707 -457 414 349 9 5 chr5 6956734 6956949 -192673201 + L1ME2 LINE L1 5842 6057 -107 2044 196 43 5 chr5 6957319 6957717 -192672433 + MLT2C2 LTR ERVL 4 416 -48 183 184 0 0 chr5 6957722 6957760 -192672390 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 249 65 0 0 chr5 6957768 6957799 -192672351 - MLT2B1 LTR ERVL 0 520 490 266 174 0 0 chr5 6957819 6957865 -192672285 + MLT2C2 LTR ERVL 509 554 0 342 343 30 18 chr5 6960225 6960394 -192669756 + MIR SINE MIR 86 256 -6 21 0 0 0 chr5 6962036 6962057 -192668093 + AT_rich Low_complexity Low_complexity 1 21 0 1854 108 36 33 chr5 6962178 6962484 -192667666 - AluSx SINE Alu -5 307 1 622 349 7 0 chr5 6962889 6963158 -192666992 + L1ME LINE L1 5495 5765 -356 720 287 116 10 chr5 6963399 6963849 -192666301 - MLT1G LTR MaLR -41 549 13 321 96 19 0 chr5 6964102 6964154 -192665996 - L1PA15 LINE L1 -642 5526 5474 * 2469 144 10 5 chr5 6964151 6964540 -192665610 + L1PA15 LINE L1 5515 5905 -260 3488 62 5 7 chr5 6964540 6964989 -192665161 + LTR7 LTR ERV1 1 448 -2 10462 98 25 16 chr5 6964991 6966575 -192663575 + HERVH LTR ERV1 1 1599 -6114 23 33 0 0 chr5 6967191 6967221 -192662929 + AT_rich Low_complexity Low_complexity 1 30 0 1528 294 63 10 chr5 6967815 6968040 -192662110 - L1ME3A LINE L1 0 6170 5946 579 292 153 44 chr5 6968040 6968569 -192661581 - L1MB4 LINE L1 -259 5921 5451 2879 158 68 2 chr5 6968569 6969096 -192661054 - MER34B LTR ERV1 0 565 4 579 292 153 44 chr5 6969096 6969662 -192660488 - L1MB4 LINE L1 -729 5451 4685 22 0 0 0 chr5 6969686 6969708 -192660442 + AT_rich Low_complexity Low_complexity 1 22 0 1922 107 38 3 chr5 6969710 6970000 -192660150 - AluSg SINE Alu -6 304 5 374 230 0 11 chr5 6970022 6970109 -192660041 - MLT1A2 LTR MaLR -1 373 288 9935 96 11 12 chr5 6970213 6971634 -192658516 + HERVH LTR ERV1 1569 2987 -4726 812 169 20 0 chr5 6971628 6971776 -192658374 + HERVH LTR ERV1 3140 3290 -4423 * 3334 122 6 2 chr5 6971766 6972266 -192657884 + HERVH LTR ERV1 3492 3993 -3720 4386 144 3 1 chr5 6972268 6972929 -192657221 + HERVH LTR ERV1 4488 5149 -2564 902 113 7 13 chr5 6972930 6973080 -192657070 + HERVH LTR ERV1 5600 5748 -1965 1850 74 8 0 chr5 6973111 6973369 -192656781 + HERVH LTR ERV1 7429 7688 -25 1603 143 32 11 chr5 6973378 6973399 -192656751 + L1PA15 LINE L1 5880 5899 -266 3482 64 0 9 chr5 6973399 6973851 -192656299 + LTR7 LTR ERV1 1 448 -2 1603 143 32 11 chr5 6973851 6974109 -192656041 + L1PA15 LINE L1 5899 6165 0 2534 153 70 98 chr5 6974638 6975371 -192654779 - LTR8A LTR ERV1 0 691 1 420 167 0 0 chr5 6975921 6975987 -192654163 + MER41C LTR ERV1 1 66 -488 273 111 0 0 chr5 6975983 6976019 -192654131 + MER41C LTR ERV1 25 60 -494 * 300 116 23 0 chr5 6976019 6976062 -192654088 + MER41C LTR ERV1 23 66 -488 243 111 28 0 chr5 6976058 6976094 -192654056 + MER41C LTR ERV1 25 61 -493 * 3138 131 82 0 chr5 6976094 6976584 -192653566 + MER41C LTR ERV1 25 554 0 251 237 31 82 chr5 6976610 6976707 -192653443 + MIR SINE MIR 92 183 -79 248 278 67 0 chr5 6976807 6976897 -192653253 - MER117 DNA MER1_type -37 160 65 2279 98 3 0 chr5 6977616 6977922 -192652228 - AluSp SINE Alu -6 307 1 2505 116 16 8 chr5 6978324 6978696 -192651454 + THE1C LTR MaLR 1 375 0 10410 116 30 15 chr5 6978696 6980253 -192649897 + THE1C-int LTR MaLR 1 1580 0 2560 116 14 5 chr5 6980253 6980624 -192649526 + THE1C LTR MaLR 1 374 -1 243 231 81 46 chr5 6981025 6981198 -192648952 + L1MCc LINE L1 1291 1469 -4954 320 241 43 43 chr5 6981323 6981439 -192648711 + L1MCc LINE L1 1907 2022 -4919 216 0 0 0 chr5 6981441 6981465 -192648685 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 5492 116 39 5 chr5 6981467 6982146 -192648004 - L1PA13 LINE L1 -11 6152 5497 2249 87 3 6 chr5 6982146 6982458 -192647692 - AluY SINE Alu 0 311 1 5492 116 39 5 chr5 6982458 6983167 -192646983 - L1PA13 LINE L1 -666 5497 4757 22 0 0 0 chr5 6983310 6983332 -192646818 + AT_rich Low_complexity Low_complexity 1 22 0 1638 163 3 26 chr5 6983466 6983772 -192646378 - AluJo SINE Alu -13 299 1 316 266 36 27 chr5 6983795 6983906 -192646244 + MIR SINE MIR 16 122 -93 3356 286 171 29 chr5 6983931 6985887 -192644263 + L2 LINE L2 1060 3312 -1 293 230 127 56 chr5 6986500 6986626 -192643524 - MIR3 SINE MIR -51 157 23 215 234 78 52 chr5 6987165 6987242 -192642908 + MIR SINE MIR 61 139 -69 698 208 127 34 chr5 6987376 6987763 -192642387 + MER31B LTR ERV1 1 543 0 1344 235 87 20 chr5 6989514 6989952 -192640198 + MLT1C LTR MaLR 1 467 0 1702 231 62 9 chr5 6990501 6990938 -192639212 - MLT1C LTR MaLR 0 467 8 2019 91 0 21 chr5 6992236 6992521 -192637629 + AluY SINE Alu 17 295 -16 1316 160 22 9 chr5 6992590 6992821 -192637329 + MLT1C LTR MaLR 1 234 -233 1958 113 17 125 chr5 6993075 6993483 -192636667 - THE1B LTR MaLR 0 364 1 1927 112 7 0 chr5 6993777 6994055 -192636095 - L1PA12 LINE L1 -141 6027 5748 1773 171 105 0 chr5 6994094 6994399 -192635751 + MER1B DNA MER1_type 1 337 0 2421 126 27 10 chr5 6995877 6996283 -192633867 - L1MA3 LINE L1 0 6305 5893 1511 225 31 39 chr5 6996293 6996707 -192633443 - L1MB5 LINE L1 -1 6173 5763 2515 20 0 3 chr5 6996903 6997199 -192632951 - AluY SINE Alu -16 295 1 964 301 106 41 chr5 6997206 6997771 -192632379 + L1M4 LINE L1 2769 3370 -2776 242 259 104 50 chr5 6997894 6998114 -192632036 + L1M4 LINE L1 3545 3776 -2370 2262 156 80 3 chr5 6998148 6998538 -192631612 + MSTA LTR MaLR 9 428 0 307 154 0 182 chr5 6998569 6998679 -192631471 + L1MC4 LINE L1 6614 6703 -1339 313 338 22 37 chr5 6998756 6998892 -192631258 + L1ME1 LINE L1 5730 5863 -303 30 45 0 0 chr5 6999231 6999275 -192630875 + AT_rich Low_complexity Low_complexity 1 44 0 892 270 41 55 chr5 7000560 7001019 -192629131 - LTR16A1 LTR ERVL -4 453 1 250 359 29 34 chr5 7001181 7001390 -192628760 - HERV16 LTR ERVL -367 5287 5080 978 323 77 45 chr5 7001466 7002583 -192627567 - HERV16 LTR ERVL -743 5021 3841 825 340 42 11 chr5 7002615 7003062 -192627088 - HERV16 LTR ERVL -4535 461 1 660 276 89 25 chr5 7003063 7003227 -192626923 - LTR16A1 LTR ERVL -1 456 304 1850 211 8 8 chr5 7003227 7003592 -192626558 - MLT1A1 LTR MaLR 0 365 1 660 276 89 25 chr5 7003592 7003799 -192626351 - LTR16A1 LTR ERVL -153 304 16 239 274 128 10 chr5 7003802 7003904 -192626246 + MIR SINE MIR 39 152 -110 480 248 0 0 chr5 7006045 7006150 -192624000 - L1MC5 LINE L1 -542 7419 7315 872 195 7 7 chr5 7006160 7006314 -192623836 + MLT1D LTR MaLR 1 154 -351 228 189 0 0 chr5 7007694 7007731 -192622419 + L1P LINE L1 4885 4921 -1225 315 281 189 18 chr5 7007960 7008241 -192621909 + L1ME3A LINE L1 1627 1955 -4441 325 286 42 60 chr5 7008277 7008568 -192621582 + L1ME3A LINE L1 2016 2267 -3948 1609 145 64 28 chr5 7008568 7008850 -192621300 + AluJb SINE Alu 1 292 -20 325 286 42 60 chr5 7008850 7008896 -192621254 + L1ME3A LINE L1 2267 2312 -3903 243 251 80 68 chr5 7008917 7009041 -192621109 + L1ME3A LINE L1 4498 4626 -1589 1959 144 18 37 chr5 7009041 7009423 -192620727 - THE1C LTR MaLR 0 375 1 243 251 80 68 chr5 7009423 7009461 -192620689 + L1ME3A LINE L1 4626 4662 -1553 291 266 70 21 chr5 7009510 7009653 -192620497 + L1ME3A LINE L1 5536 5685 -554 412 257 73 0 chr5 7009673 7009809 -192620341 + L1ME3A LINE L1 5777 5922 -317 1834 148 0 0 chr5 7010223 7010480 -192619670 - AluSx SINE Alu -20 292 36 25 31 0 0 chr5 7013336 7013368 -192616782 + AT_rich Low_complexity Low_complexity 1 32 0 288 359 23 0 chr5 7015603 7015731 -192614419 + LTR16A LTR ERVL 16 146 -304 636 327 81 0 chr5 7015766 7015977 -192614173 + LTR16A LTR ERVL 223 450 0 2371 93 3 0 chr5 7016522 7016822 -192613328 - AluSp SINE Alu -12 301 1 658 233 127 12 chr5 7016917 7017170 -192612980 + MER114 LTR ERV 1 282 -366 920 226 17 41 chr5 7017170 7017619 -192612531 + L1ME2 LINE L1 5515 6046 -118 493 289 41 5 chr5 7017726 7017923 -192612227 + MER114 LTR ERV 445 648 0 1984 219 35 22 chr5 7018216 7018705 -192611445 + MLT1D LTR MaLR 3 497 -8 1111 209 34 47 chr5 7018757 7019053 -192611097 - L1ME2 LINE L1 -10 6154 5863 1735 250 53 21 chr5 7019055 7019886 -192610264 - L1ME2 LINE L1 -396 5768 4905 2450 96 0 3 chr5 7020486 7020799 -192609351 + AluSp SINE Alu 1 312 -1 27 29 0 0 chr5 7021152 7021186 -192608964 + AT_rich Low_complexity Low_complexity 1 34 0 252 350 26 8 chr5 7021838 7021955 -192608195 + L2 LINE L2 3150 3268 -4 208 250 11 11 chr5 7022337 7022416 -192607734 + (TA)n Simple_repeat Simple_repeat 2 83 -6 2392 87 0 3 chr5 7022416 7022728 -192607422 + AluY SINE Alu 1 311 0 208 250 11 11 chr5 7022728 7022736 -192607414 + (TA)n Simple_repeat Simple_repeat 82 89 0 304 325 126 15 chr5 7023179 7023385 -192606765 + LTR33 LTR ERVL 293 521 0 2113 185 28 28 chr5 7023963 7024385 -192605765 + MSTB LTR MaLR 2 423 -3 9269 180 21 8 chr5 7024389 7026019 -192604131 + MSTB-int LTR MaLR 1 1651 0 1175 160 5 0 chr5 7026021 7026209 -192603941 + MSTB LTR MaLR 3 191 -235 1104 173 309 19 chr5 7026312 7026660 -192603490 - MER31B LTR ERV1 -9 505 6 23 0 0 0 chr5 7027500 7027523 -192602627 + AT_rich Low_complexity Low_complexity 1 23 0 621 228 28 62 chr5 7027634 7027845 -192602305 + MLT1G LTR MaLR 1 204 -391 1503 186 84 12 chr5 7027846 7028179 -192601971 + MLT1A1 LTR MaLR 9 365 0 1058 214 34 8 chr5 7028252 7028486 -192601664 + MLT1G LTR MaLR 351 590 0 23 0 0 0 chr5 7028526 7028549 -192601601 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 7028713 7028737 -192601413 + AT_rich Low_complexity Low_complexity 1 24 0 221 278 19 0 chr5 7029061 7029115 -192601035 - L2 LINE L2 -253 3060 3006 2548 164 67 61 chr5 7029278 7029900 -192600250 + L1MC1 LINE L1 5710 6332 -1 260 243 21 7 chr5 7032692 7032836 -192597314 + (TG)n Simple_repeat Simple_repeat 1 146 0 571 227 244 27 chr5 7034143 7034635 -192595515 + LTR50 LTR ERVL 83 791 -4 285 29 0 0 chr5 7036492 7036526 -192593624 + (TG)n Simple_repeat Simple_repeat 1 34 0 204 132 26 0 chr5 7036526 7036564 -192593586 + GA-rich Low_complexity Low_complexity 2 40 0 212 364 31 8 chr5 7037429 7037558 -192592592 + MIR SINE MIR 20 151 -111 931 189 0 11 chr5 7037933 7038113 -192592037 - MER49 LTR ERV1 0 923 746 2176 129 26 6 chr5 7038113 7038455 -192591695 - MER49 LTR ERV1 -565 358 10 1047 202 40 0 chr5 7038505 7038703 -192591447 + MER20 DNA MER1_type 5 210 -9 291 54 0 0 chr5 7038720 7038757 -192591393 + (TG)n Simple_repeat Simple_repeat 2 38 0 258 156 0 0 chr5 7039565 7039610 -192590540 + CT-rich Low_complexity Low_complexity 2 46 0 2200 64 44 17 chr5 7041233 7041530 -192588620 - AluY SINE Alu -6 305 1 252 0 0 0 chr5 7042119 7042147 -192588003 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 250 394 7 19 chr5 7042845 7043000 -192587150 + MER5A DNA MER1_type 1 153 -36 191 114 29 0 chr5 7043702 7043737 -192586413 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 210 37 0 0 chr5 7043829 7043856 -192586294 + (CAA)n Simple_repeat Simple_repeat 1 27 0 332 325 22 39 chr5 7043869 7044176 -192585974 + L1MCa LINE L1 1164 1526 -4890 186 43 0 0 chr5 7044299 7044322 -192585828 + (A)n Simple_repeat Simple_repeat 1 23 0 274 314 16 21 chr5 7044352 7044546 -192585604 + L1MCa LINE L1 1684 1876 -4550 920 96 7 44 chr5 7044552 7044687 -192585463 - FRAM SINE Alu -27 149 20 233 303 0 9 chr5 7044693 7044802 -192585348 + L1MCa LINE L1 1917 2024 -4583 451 101 0 14 chr5 7044803 7044872 -192585278 + MER4A LTR ERV1 1 68 -596 923 250 63 31 chr5 7046933 7047288 -192582862 - MLT2D LTR ERVL -8 389 1 220 349 28 28 chr5 7047644 7047750 -192582400 + L2 LINE L2 2953 3058 -214 242 372 16 16 chr5 7047968 7048097 -192582053 + MIR3 SINE MIR 3 131 -77 425 296 66 49 chr5 7048243 7048469 -192581681 + MIR SINE MIR 9 238 -24 218 205 157 0 chr5 7048538 7048621 -192581529 + MIR SINE MIR 59 154 -108 247 297 40 20 chr5 7049578 7049679 -192580471 + MIR SINE MIR 50 152 -110 21 36 0 0 chr5 7050908 7050936 -192579214 + AT_rich Low_complexity Low_complexity 1 28 0 682 143 56 8 chr5 7051288 7051414 -192578736 - L1MB5 LINE L1 0 6174 6043 2427 72 0 7 chr5 7051557 7051863 -192578287 - AluY SINE Alu -7 304 1 624 51 0 25 chr5 7051863 7051942 -192578208 - AluY SINE Alu -177 134 58 1088 166 59 63 chr5 7052322 7052512 -192577638 - L1MB5 LINE L1 -122 6052 5862 1726 179 43 18 chr5 7052512 7052841 -192577309 + MER1B DNA MER1_type 1 337 0 1088 166 59 63 chr5 7052841 7052921 -192577229 - L1MB5 LINE L1 -312 5862 5783 1079 203 11 103 chr5 7052940 7053319 -192576831 - MLT1B LTR MaLR -32 358 15 1230 199 139 42 chr5 7053337 7053576 -192576574 - L1MB5 LINE L1 -386 5788 5507 2238 125 3 0 chr5 7053576 7053887 -192576263 - AluSx SINE Alu 0 312 1 1230 199 139 42 chr5 7053887 7053979 -192576171 - L1MB5 LINE L1 -667 5507 5425 471 247 61 47 chr5 7053977 7054212 -192575938 - L1MC/D LINE L1 -350 5771 5541 * 3204 199 61 15 chr5 7054415 7055169 -192574981 - L1MB5 LINE L1 -1910 4236 3448 3299 191 30 80 chr5 7055172 7056024 -192574126 + L1PA12 LINE L1 5347 6156 -12 269 250 47 0 chr5 7056353 7056417 -192573733 + L2 LINE L2 2897 2963 -309 636 209 32 0 chr5 7056419 7056562 -192573588 - L1MC4 LINE L1 -964 7062 6884 231 267 0 80 chr5 7056663 7056738 -192573412 + L2 LINE L2 3245 3313 0 1244 209 133 37 chr5 7057415 7057839 -192572311 + MER66A LTR ERV1 97 478 0 239 284 81 20 chr5 7058776 7058924 -192571226 - L1 LINE L1 -1723 4423 4267 2504 284 72 37 chr5 7059829 7061540 -192568610 - L1 LINE L1 -2230 3916 2146 378 260 42 0 chr5 7061561 7061657 -192568493 + MER45A DNA AcHobo 79 178 0 254 254 218 0 chr5 7061805 7061915 -192568235 - MIR SINE MIR -2 260 127 230 341 44 0 chr5 7061942 7062033 -192568117 - MIR SINE MIR -123 139 45 198 0 0 0 chr5 7063230 7063252 -192566898 + (A)n Simple_repeat Simple_repeat 1 22 0 186 43 0 0 chr5 7063668 7063691 -192566459 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1377 112 0 16 chr5 7063711 7063898 -192566252 - AluSx SINE Alu -127 185 2 1023 214 119 35 chr5 7064861 7065209 -192564941 - MER31B LTR ERV1 0 543 74 4149 134 47 16 chr5 7066950 7067628 -192562522 - LTR34 LTR ERV1 0 699 1 25 0 0 0 chr5 7069028 7069053 -192561097 + AT_rich Low_complexity Low_complexity 1 25 0 473 279 80 63 chr5 7069170 7069532 -192560618 + L1ME4a LINE L1 5574 5941 -180 363 282 24 8 chr5 7069725 7069764 -192560386 - L1MA10 LINE L1 -14 6320 6282 1782 254 34 44 chr5 7069764 7070355 -192559795 - L1ME1 LINE L1 -44 6122 5538 6815 85 2 2 chr5 7070381 7071616 -192558534 - L1PA10 LINE L1 0 6168 4917 439 286 82 48 chr5 7071691 7071960 -192558190 - LTR43 LTR ERV1 -145 457 180 988 217 9 9 chr5 7072475 7072687 -192557463 - L1ME1 LINE L1 -629 5537 5326 2631 231 113 85 chr5 7072689 7072940 -192557210 + L1M4 LINE L1 3611 3854 -2292 372 111 0 0 chr5 7072940 7073003 -192557147 + (TATG)n Simple_repeat Simple_repeat 2 64 0 2631 231 113 85 chr5 7073003 7073249 -192556901 + L1M4 LINE L1 3854 4092 -2054 1946 141 3 25 chr5 7073249 7073568 -192556582 - AluSx SINE Alu 0 312 1 2631 231 113 85 chr5 7073568 7074617 -192555533 + L1M4 LINE L1 4092 5335 -811 2219 119 64 9 chr5 7074894 7075238 -192554912 - THE1B LTR MaLR -1 363 1 203 187 40 27 chr5 7076287 7076362 -192553788 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 183 326 58 12 chr5 7076834 7076920 -192553230 - MIR SINE MIR -153 109 20 730 293 127 21 chr5 7076926 7077305 -192552845 - L2 LINE L2 -1 3312 2894 283 275 113 50 chr5 7077613 7077773 -192552377 + MIR3 SINE MIR 13 182 -26 212 100 50 0 chr5 7078723 7078763 -192551387 + (TG)n Simple_repeat Simple_repeat 2 43 0 879 161 6 25 chr5 7079516 7079678 -192550472 - THE1C LTR MaLR 0 375 217 583 162 9 9 chr5 7079682 7079787 -192550363 - THE1C LTR MaLR -321 107 3 354 163 28 0 chr5 7081943 7082015 -192548135 + Tigger4(Zombi) DNA MER2_type -2 2717 -14 1810 166 7 14 chr5 7082289 7082584 -192547566 + AluJb SINE Alu 1 293 -19 709 258 79 97 chr5 7083400 7083908 -192546242 + MLT1F LTR MaLR 28 526 -16 5137 106 13 12 chr5 7084474 7085164 -192544986 - LTR8 LTR ERV1 0 691 1 2314 165 89 50 chr5 7086091 7086624 -192543526 + LTR8A LTR ERV1 1 554 -173 2256 162 77 2 chr5 7086624 7087026 -192543124 + MER57B LTR ERV1 3 434 0 880 222 20 86 chr5 7087840 7088142 -192542008 + MER33 DNA MER1_type 7 288 -36 411 163 163 0 chr5 7088165 7088263 -192541887 + L1MA8 LINE L1 6170 6283 -8 226 131 66 82 chr5 7088268 7088329 -192541821 + MER33 DNA MER1_type 258 317 -7 329 305 207 53 chr5 7088918 7089256 -192540894 - L1ME LINE L1 -5629 441 52 3241 159 19 62 chr5 7089530 7090170 -192539980 - LTR9 LTR ERV1 0 612 1 2072 187 84 25 chr5 7090573 7091189 -192538961 - MER39 LTR ERV1 -5 702 2 281 261 51 72 chr5 7091337 7091475 -192538675 + MLT1H LTR MaLR 37 171 -378 320 287 18 43 chr5 7091581 7091646 -192538504 + MER41B LTR ERV1 54 119 -516 2455 79 0 10 chr5 7091646 7091951 -192538199 + AluY SINE Alu 1 302 -9 320 287 18 43 chr5 7091951 7092134 -192538016 + MER41B LTR ERV1 119 430 -205 250 260 130 41 chr5 7092523 7092646 -192537504 + MLT1H LTR MaLR 400 533 -16 1763 165 9 39 chr5 7092771 7093105 -192537045 + MER65A LTR ERV1 3 326 -119 554 90 51 0 chr5 7093095 7093173 -192536977 + MER51B LTR ERV1 296 377 0 * 1800 199 18 15 chr5 7094826 7095168 -192534982 + MER61A LTR ERV1 1 343 0 4456 133 61 22 chr5 7095168 7095926 -192534224 + MER61A-int LTR ERV1 1 787 -4430 * 26149 98 27 14 chr5 7095911 7099710 -192530440 + MER61A-int LTR ERV1 1320 5216 -1 1913 164 26 23 chr5 7099710 7100052 -192530098 + MER61A LTR ERV1 1 343 0 455 273 62 11 chr5 7100185 7100361 -192529789 - MIR SINE MIR -58 204 20 641 284 39 0 chr5 7100942 7101146 -192529004 + L1ME2 LINE L1 5364 5575 -2210 553 169 0 0 chr5 7101155 7101238 -192528912 + AluJ/FLAM SINE Alu 2 84 -228 282 256 156 11 chr5 7101238 7101328 -192528822 + L1ME2 LINE L1 5573 5675 -489 1670 221 56 25 chr5 7101472 7101921 -192528229 + L1ME2 LINE L1 5683 6145 -19 2092 164 62 34 chr5 7102308 7102724 -192527426 - MSTA LTR MaLR 0 428 1 1422 236 15 18 chr5 7102747 7103141 -192527009 + Charlie1b DNA MER1_type 2 394 -129 26 30 0 0 chr5 7103141 7103174 -192526976 + AT_rich Low_complexity Low_complexity 1 33 0 306 291 47 47 chr5 7103419 7103591 -192526559 + MIR SINE MIR 47 218 -44 201 206 175 16 chr5 7103801 7103864 -192526286 + L2 LINE L2 3200 3272 0 21 57 0 0 chr5 7104147 7104182 -192525968 + AT_rich Low_complexity Low_complexity 1 35 0 2008 186 49 3 chr5 7105858 7106207 -192523943 - MLT1A1 LTR MaLR 0 365 1 189 141 41 59 chr5 7106265 7106435 -192523715 + (TTATA)n Simple_repeat Simple_repeat 3 169 0 * 273 118 87 6 chr5 7106404 7106565 -192523585 + (TA)n Simple_repeat Simple_repeat 1 174 0 28 29 0 0 chr5 7106635 7106670 -192523480 + AT_rich Low_complexity Low_complexity 1 35 0 1631 202 74 3 chr5 7107246 7107583 -192522567 + MLT1A1 LTR MaLR 4 364 -1 1342 241 126 38 chr5 7107932 7107998 -192522152 - MLT1D LTR MaLR 0 626 567 1895 94 0 4 chr5 7107998 7108242 -192521908 + AluSq SINE Alu 1 243 -70 1342 241 126 38 chr5 7108242 7108740 -192521410 - MLT1D LTR MaLR -59 567 4 485 117 64 0 chr5 7109479 7109573 -192520577 - L1MA8 LINE L1 -101 6190 6091 571 173 9 0 chr5 7109573 7109667 -192520483 + L1MA8 LINE L1 6179 6289 -2 252 322 9 0 chr5 7109734 7109849 -192520301 + L1MCc LINE L1 1285 1400 -5023 572 223 81 39 chr5 7109858 7110183 -192519967 + MLT1F LTR MaLR 175 542 0 1238 249 36 42 chr5 7110183 7110661 -192519489 + L1ME3A LINE L1 5646 6120 -50 4641 175 111 32 chr5 7112535 7113612 -192516538 - MER52C LTR ERV1 0 1278 116 294 73 0 0 chr5 7114357 7114398 -192515752 + (CA)n Simple_repeat Simple_repeat 2 42 0 2040 148 35 27 chr5 7114760 7115132 -192515018 + THE1C LTR MaLR 1 375 0 402 317 7 21 chr5 7115649 7115791 -192514359 - L2 LINE L2 -1 3312 3173 1113 294 75 21 chr5 7115880 7116437 -192513713 - L2 LINE L2 -413 2901 2315 1285 268 26 52 chr5 7116444 7116907 -192513243 + MLT1C LTR MaLR 10 460 -7 565 283 143 7 chr5 7116921 7117214 -192512936 - L2 LINE L2 -1001 2313 1981 2088 204 20 32 chr5 7117233 7117675 -192512475 + MER70A LTR ERVL 36 472 0 259 284 128 0 chr5 7117752 7117861 -192512289 - L2 LINE L2 -1391 1923 1801 298 320 77 13 chr5 7117976 7118132 -192512018 + L2 LINE L2 2623 2788 -526 366 326 99 38 chr5 7118228 7118677 -192511473 + L1MD1 LINE L1 5269 5743 -419 * 618 225 8 0 chr5 7118654 7118783 -192511367 - L1M2 LINE L1 -494 5818 5689 769 180 0 0 chr5 7118783 7118914 -192511236 + L1MA9 LINE L1 6174 6312 0 303 296 11 0 chr5 7118918 7119006 -192511144 + L1MD1 LINE L1 6033 6121 -121 1323 138 0 0 chr5 7119006 7119195 -192510955 - AluSp SINE Alu -7 306 118 956 93 0 0 chr5 7119295 7119413 -192510737 - AluSq/x SINE Alu -194 118 1 609 197 8 15 chr5 7119413 7119545 -192510605 + L1MD1 LINE L1 6112 6242 0 301 233 19 58 chr5 7119620 7119723 -192510427 - HAL1 LINE L1 -1481 1026 928 625 274 96 15 chr5 7119984 7120254 -192509896 - HAL1 LINE L1 -2213 294 3 1866 196 2 45 chr5 7120266 7120663 -192509487 - MLT1B LTR MaLR -8 382 3 1615 180 39 29 chr5 7120979 7121285 -192508865 - AluJb SINE Alu -3 309 1 560 244 77 18 chr5 7121757 7121925 -192508225 - MER45A DNA AcHobo 0 178 1 2356 60 4 0 chr5 7123046 7123366 -192506784 + AluY SINE Alu 1 321 0 3280 149 39 6 chr5 7124063 7124573 -192505577 - MER1A DNA MER1_type 0 527 1 533 233 43 43 chr5 7125177 7125465 -192504685 + MLT1D LTR MaLR 128 505 0 468 218 0 15 chr5 7125989 7126107 -192504043 - L1MC4 LINE L1 -364 7631 7448 270 0 0 0 chr5 7126120 7126150 -192504000 + (TG)n Simple_repeat Simple_repeat 2 31 0 1695 211 124 63 chr5 7127361 7127935 -192502215 + MLT1E2 LTR MaLR 2 610 -16 2427 185 57 19 chr5 7130051 7130071 -192500079 - L1MC2 LINE L1 -1 6343 6325 2529 61 0 0 chr5 7130071 7130367 -192499783 - AluY SINE Alu -15 296 1 2427 185 57 19 chr5 7130367 7130877 -192499273 - L1MC2 LINE L1 -19 6325 5793 2029 145 0 0 chr5 7130887 7131184 -192498966 - AluSx SINE Alu -13 299 3 871 127 14 18 chr5 7131198 7131415 -192498735 - L1MC1 LINE L1 -271 6062 5698 2003 102 3 108 chr5 7132155 7132478 -192497672 + AluSq SINE Alu 1 289 -14 12936 206 14 17 chr5 7132636 7132683 -192497467 - L1PA15 LINE L1 -1 6164 6118 2053 144 0 0 chr5 7132683 7133024 -192497126 - AluSx SINE Alu 0 312 1 12936 206 14 17 chr5 7133024 7136398 -192493752 - L1PA15 LINE L1 -47 6118 2762 185 0 40 0 chr5 7136398 7136423 -192493727 + (TTG)n Simple_repeat Simple_repeat 2 27 0 12936 206 14 17 chr5 7136423 7136646 -192493504 - L1PA15 LINE L1 -3403 2762 2540 343 273 78 8 chr5 7137222 7137350 -192492800 - LTR50 LTR ERVL -160 635 499 263 298 142 60 chr5 7138004 7138306 -192491844 - HERVL LTR ERVL -255 5399 5073 1793 327 76 27 chr5 7138386 7139621 -192490529 - HERVL LTR ERVL -1234 4530 3157 488 89 40 20 chr5 7140279 7140380 -192489770 + GA-rich Low_complexity Low_complexity 3 105 0 848 110 6 33 chr5 7140380 7140562 -192489588 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 214 184 0 0 chr5 7140562 7140600 -192489550 + GA-rich Low_complexity Low_complexity 2 39 0 1220 207 70 14 chr5 7140606 7140891 -192489259 - MLT1C LTR MaLR 0 467 167 3634 204 44 47 chr5 7141534 7142450 -192487700 - L1MC3 LINE L1 0 7785 6873 1686 195 16 55 chr5 7142450 7142696 -192487454 - MLT1A1 LTR MaLR 0 365 138 1562 221 106 81 chr5 7142696 7143403 -192486747 - LTR8A LTR ERV1 -2 725 1 1686 195 16 55 chr5 7143403 7143536 -192486614 - MLT1A1 LTR MaLR -227 138 1 1170 203 68 17 chr5 7143536 7143831 -192486319 - L1MC3 LINE L1 -936 6849 6540 2948 145 134 0 chr5 7143867 7144391 -192485759 - LTR29 LTR ERV1 -28 594 1 5127 191 55 6 chr5 7144391 7145437 -192484713 - L1MC3 LINE L1 -1242 6543 5446 2738 29 0 0 chr5 7145440 7145751 -192484399 - AluYa5 SINE Alu 0 311 1 226 161 54 54 chr5 7146710 7146766 -192483384 - MLT1-int LTR MaLR -1311 60 5 245 315 69 22 chr5 7147187 7147377 -192482773 - MIR3 SINE MIR -46 216 15 2390 251 63 12 chr5 7148785 7149390 -192480760 - MER92B LTR ERV1 0 636 1 277 297 78 16 chr5 7150651 7150779 -192479371 - L1MDa LINE L1 -4840 1700 1565 2116 229 109 24 chr5 7150931 7151599 -192478551 + MER50 LTR ERV1 10 734 0 2836 189 34 11 chr5 7152001 7152055 -192478095 + MER44D DNA MER2_type 2 53 -2434 4202 97 51 14 chr5 7152055 7152643 -192477507 - MER4B LTR ERV1 0 610 1 2836 189 34 11 chr5 7152643 7153123 -192477027 + MER44D DNA MER2_type 53 603 -2 217 0 0 0 chr5 7153849 7153873 -192476277 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 2237 81 0 11 chr5 7153873 7154156 -192475994 - AluSc SINE Alu -29 280 1 1324 206 4 0 chr5 7155279 7155517 -192474633 - AluJb SINE Alu -73 239 1 622 300 65 20 chr5 7156372 7156619 -192473531 + LTR16B LTR ERVL 196 453 -11 284 312 76 62 chr5 7156946 7157683 -192472467 + L2 LINE L2 2303 3051 -221 342 0 0 0 chr5 7157734 7157772 -192472378 + (TG)n Simple_repeat Simple_repeat 2 39 0 1809 109 0 115 chr5 7157772 7158094 -192472056 - AluSx SINE Alu -27 285 1 399 236 6 51 chr5 7158772 7158950 -192471200 + (TATATG)n Simple_repeat Simple_repeat 4 173 0 1137 257 152 26 chr5 7159438 7159780 -192470370 + MLT1E LTR MaLR 75 459 -134 547 157 0 0 chr5 7159913 7159996 -192470154 + AluS SINE Alu 2 84 -229 3526 131 28 30 chr5 7160796 7161397 -192468753 + MER4A LTR ERV1 1 600 0 21 57 0 0 chr5 7161526 7161561 -192468589 + AT_rich Low_complexity Low_complexity 1 35 0 279 232 0 0 chr5 7162106 7162162 -192467988 + LTR33 LTR ERVL 77 132 -389 2657 110 3 3 chr5 7162316 7162680 -192467470 + THE1B LTR MaLR 1 364 0 246 261 33 11 chr5 7162710 7162802 -192467348 + LTR33 LTR ERVL 397 490 -31 218 342 7 40 chr5 7162804 7162953 -192467197 - MIR SINE MIR -59 203 60 258 325 162 0 chr5 7163677 7163794 -192466356 - L2 LINE L2 -15 3257 3122 2502 91 0 0 chr5 7165389 7165697 -192464453 + AluSx SINE Alu 1 308 -4 784 308 115 16 chr5 7166067 7166512 -192463638 + LTR33 LTR ERVL 24 512 -9 1584 206 41 15 chr5 7168028 7168367 -192461783 - MER7A DNA MER2_type 0 346 1 234 91 0 0 chr5 7168553 7168586 -192461564 + (TA)n Simple_repeat Simple_repeat 2 34 0 180 0 0 0 chr5 7168639 7168659 -192461491 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 480 48 0 0 chr5 7168658 7168721 -192461429 + (GA)n Simple_repeat Simple_repeat 2 64 0 1527 234 105 18 chr5 7170484 7170942 -192459208 - MLT1D LTR MaLR 0 505 8 409 255 56 87 chr5 7170968 7171199 -192458951 + MLT1K LTR MaLR 328 551 -37 23 0 0 0 chr5 7171854 7171877 -192458273 + AT_rich Low_complexity Low_complexity 1 23 0 2140 117 0 0 chr5 7172490 7172817 -192457333 + AluSx SINE Alu 1 327 0 224 269 10 0 chr5 7173012 7173116 -192457034 + (TG)n Simple_repeat Simple_repeat 2 106 0 841 239 50 18 chr5 7173464 7173682 -192456468 - MLT1B LTR MaLR 0 390 166 507 157 21 21 chr5 7173684 7173824 -192456326 + CT-rich Low_complexity Low_complexity 1 140 0 1053 140 0 0 chr5 7173830 7174008 -192456142 + (TTC)n Simple_repeat Simple_repeat 3 180 0 236 267 0 0 chr5 7174017 7174077 -192456073 - FLAM SINE Alu -1 132 73 * 764 224 11 38 chr5 7174061 7174244 -192455906 - MLT1B LTR MaLR -211 179 2 2082 136 19 45 chr5 7174818 7175192 -192454958 + THE1B LTR MaLR 1 364 0 303 311 52 15 chr5 7175928 7176063 -192454087 + MIR SINE MIR 25 164 -98 233 263 84 66 chr5 7176154 7176367 -192453783 + L1MC1 LINE L1 3895 4111 -2035 383 205 18 35 chr5 7177134 7177369 -192452781 + (TATAA)n Simple_repeat Simple_repeat 1 230 0 228 217 29 0 chr5 7177342 7177411 -192452739 + T-rich Low_complexity Low_complexity 1 71 0 * 23 54 0 0 chr5 7177440 7177477 -192452673 + AT_rich Low_complexity Low_complexity 1 37 0 5354 203 15 16 chr5 7177672 7178675 -192451475 + L1MC1 LINE L1 4819 5821 -512 432 37 0 0 chr5 7178675 7178729 -192451421 + (CA)n Simple_repeat Simple_repeat 1 54 0 5354 203 15 16 chr5 7178729 7178877 -192451273 + L1MC1 LINE L1 5821 5968 -365 2022 152 3 0 chr5 7178877 7179186 -192450964 + AluSx SINE Alu 1 310 -2 5354 203 15 16 chr5 7179186 7179550 -192450600 + L1MC1 LINE L1 5968 6333 0 541 240 25 75 chr5 7179634 7179757 -192450393 + MIR SINE MIR 73 184 -78 2115 128 0 16 chr5 7179757 7180061 -192450089 - AluSx SINE Alu -13 299 1 541 240 25 75 chr5 7180061 7180137 -192450013 + MIR SINE MIR 184 262 0 2051 128 25 0 chr5 7180945 7181226 -192448924 + AluSg SINE Alu 5 292 -18 210 118 0 0 chr5 7181697 7181731 -192448419 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 263 191 176 69 chr5 7181732 7181863 -192448287 + L1ME4a LINE L1 5947 6091 -30 185 105 0 26 chr5 7182494 7182532 -192447618 + (TA)n Simple_repeat Simple_repeat 1 37 0 1473 91 21 45 chr5 7182671 7182914 -192447236 + L1PA5 LINE L1 5918 6154 0 186 189 0 0 chr5 7184256 7184293 -192445857 + (CAT)n Simple_repeat Simple_repeat 2 38 0 236 184 207 23 chr5 7184465 7184552 -192445598 + MIR SINE MIR 52 154 -108 816 271 45 16 chr5 7185473 7185842 -192444308 + L1ME LINE L1 498 873 -5197 680 191 58 143 chr5 7187883 7188027 -192442123 - MLT1B LTR MaLR -122 268 160 2192 129 36 33 chr5 7188027 7188390 -192441760 + THE1B LTR MaLR 1 364 0 680 191 58 143 chr5 7188390 7188538 -192441612 - MLT1B LTR MaLR -230 160 1 294 176 22 11 chr5 7189118 7189209 -192440941 + (CA)n Simple_repeat Simple_repeat 2 93 0 508 303 59 17 chr5 7189572 7189810 -192440340 - LTR16C LTR ERVL -94 397 150 1297 163 0 5 chr5 7189889 7190098 -192440052 + AluJb SINE Alu 86 293 -19 216 135 0 0 chr5 7190112 7190149 -192440001 + (CA)n Simple_repeat Simple_repeat 2 38 0 3103 140 45 18 chr5 7190384 7190935 -192439215 + L1MB3 LINE L1 5618 6183 0 198 305 17 0 chr5 7191862 7191921 -192438229 + L2 LINE L2 3249 3308 -5 1929 104 107 7 chr5 7195202 7195482 -192434668 + AluSx SINE Alu 1 308 -4 766 235 6 0 chr5 7196364 7196526 -192433624 - MLT1E2 LTR MaLR -6 499 337 1152 235 34 53 chr5 7196576 7196954 -192433196 + MLT1C LTR MaLR 97 467 0 1026 226 65 62 chr5 7196971 7197307 -192432843 - MLT1E2 LTR MaLR -289 337 1 199 307 150 13 chr5 7197710 7197863 -192432287 - L2 LINE L2 -222 3050 2877 673 122 9 0 chr5 7198086 7198193 -192431957 + MER50 LTR ERV1 497 604 -130 907 249 128 21 chr5 7200651 7200980 -192429170 - MLT1D LTR MaLR -6 499 136 599 148 9 19 chr5 7201100 7201208 -192428942 - MLT2C2 LTR ERVL -357 107 1 1441 240 58 17 chr5 7201962 7202379 -192427771 + MLT1C LTR MaLR 1 434 -33 1332 115 0 6 chr5 7202391 7202573 -192427577 - AluSq SINE Alu -132 181 1 2078 119 0 7 chr5 7203361 7203654 -192426496 + AluSx SINE Alu 1 291 -21 23 54 0 0 chr5 7204174 7204211 -192425939 + AT_rich Low_complexity Low_complexity 1 37 0 309 206 39 59 chr5 7204225 7204327 -192425823 + MIR3 SINE MIR 86 185 -23 456 339 5 16 chr5 7205140 7205332 -192424818 - MIR SINE MIR -29 233 44 287 269 0 0 chr5 7206002 7206069 -192424081 + CT-rich Low_complexity Low_complexity 2 68 0 703 152 51 0 chr5 7207881 7208019 -192422131 + L1MA5 LINE L1 6155 6299 -1 3106 141 65 6 chr5 7208162 7208652 -192421498 - LTR44 LTR ERV1 0 519 1 3097 77 8 2 chr5 7208819 7209221 -192420929 + MLT2A1 LTR ERVL 1 404 -40 648 173 0 0 chr5 7209232 7209382 -192420768 + (TA)n Simple_repeat Simple_repeat 1 150 0 231 140 0 88 chr5 7209405 7209462 -192420688 + LTR66 LTR ERVL 398 449 -161 * 327 98 59 0 chr5 7209445 7209496 -192420654 + MLT2A1 LTR ERVL 391 444 0 273 119 0 0 chr5 7209973 7210015 -192420135 + (TG)n Simple_repeat Simple_repeat 1 42 0 279 54 0 0 chr5 7210474 7210511 -192419639 + (TG)n Simple_repeat Simple_repeat 1 37 0 1555 113 8 8 chr5 7210718 7210957 -192419193 - MER57B LTR ERV1 0 434 196 24 0 0 0 chr5 7211227 7211251 -192418899 + AT_rich Low_complexity Low_complexity 1 24 0 1399 122 15 5 chr5 7211293 7211498 -192418652 - MER57B LTR ERV1 -227 207 1 1746 195 57 3 chr5 7211708 7212026 -192418124 + MLT1A1 LTR MaLR 9 343 -22 594 144 33 0 chr5 7212193 7212283 -192417867 + FLAM_A SINE Alu 32 124 -18 2338 106 6 3 chr5 7213390 7213701 -192416449 - AluSx SINE Alu 0 312 1 252 100 0 0 chr5 7214948 7214988 -192415162 + (TA)n Simple_repeat Simple_repeat 2 41 0 374 250 23 0 chr5 7214992 7215080 -192415070 + L1MC4 LINE L1 6614 6703 -1339 247 198 0 62 chr5 7215086 7215182 -192414968 + L1MC4 LINE L1 6614 6703 -1339 392 232 21 42 chr5 7215184 7215344 -192414806 + L1MC3 LINE L1 6526 6703 -1139 385 184 0 82 chr5 7215326 7215424 -192414726 + L1MC4 LINE L1 6614 6703 -1339 * 210 171 0 0 chr5 7215428 7215469 -192414681 + (TA)n Simple_repeat Simple_repeat 2 42 0 2601 200 16 40 chr5 7215486 7215522 -192414628 - MLT2B3 LTR ERVL -15 539 504 954 46 46 17 chr5 7215522 7215697 -192414453 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2601 200 16 40 chr5 7215697 7216204 -192413946 - MLT2B3 LTR ERVL -50 504 9 229 297 33 11 chr5 7217998 7218089 -192412061 + MLT1A1 LTR MaLR 457 549 0 23 0 0 0 chr5 7218462 7218485 -192411665 + AT_rich Low_complexity Low_complexity 1 23 0 306 0 0 0 chr5 7219035 7219069 -192411081 + (TG)n Simple_repeat Simple_repeat 1 34 0 201 178 22 0 chr5 7220822 7220867 -192409283 - L2 LINE L2 0 3313 3268 1664 184 23 26 chr5 7221471 7221781 -192408369 - AluJo SINE Alu -3 309 1 21 36 0 0 chr5 7223974 7224002 -192406148 + AT_rich Low_complexity Low_complexity 1 28 0 1609 135 54 0 chr5 7224937 7225196 -192404954 + AluSx SINE Alu 40 312 0 298 294 28 18 chr5 7225292 7225401 -192404749 - MER94 DNA DNA -22 112 3 323 118 20 0 chr5 7225495 7225546 -192404604 + MLT1A1 LTR MaLR 1 52 -313 254 250 7 0 chr5 7226231 7226383 -192403767 + (TG)n Simple_repeat Simple_repeat 2 154 0 24 0 0 0 chr5 7227660 7227684 -192402466 + AT_rich Low_complexity Low_complexity 1 24 0 1114 219 16 27 chr5 7228067 7228323 -192401827 - L1MB5 LINE L1 -297 5877 5625 * 1164 221 31 7 chr5 7228322 7228627 -192401523 + L1MB5 LINE L1 5867 6180 0 12608 176 22 8 chr5 7228899 7230244 -192399906 + L1PB3 LINE L1 2633 3957 -2197 1962 138 10 3 chr5 7230244 7230540 -192399610 + AluSg SINE Alu 1 298 -12 12608 176 22 8 chr5 7230540 7230945 -192399205 + L1PB3 LINE L1 3957 4355 -1799 230 29 59 0 chr5 7230945 7230979 -192399171 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 12608 176 22 8 chr5 7230979 7232699 -192397451 + L1PB3 LINE L1 4355 6154 0 1798 138 64 3 chr5 7233981 7234264 -192395886 + AluJb SINE Alu 1 300 -12 274 275 58 7 chr5 7234503 7234697 -192395453 + (TCTA)n Simple_repeat Simple_repeat 1 203 0 1369 214 206 3 chr5 7234814 7235192 -192394958 + MLT2B2 LTR ERVL 1 455 -60 345 24 0 0 chr5 7235195 7235237 -192394913 + (CA)n Simple_repeat Simple_repeat 2 43 0 270 285 51 15 chr5 7235252 7235389 -192394761 + MIR SINE MIR 81 222 -40 36 53 0 0 chr5 7235522 7235579 -192394571 + AT_rich Low_complexity Low_complexity 1 57 0 1627 90 36 0 chr5 7235708 7235930 -192394220 - L1PA10 LINE L1 -4 6164 5935 33 56 0 0 chr5 7236063 7236117 -192394033 + AT_rich Low_complexity Low_complexity 1 54 0 21 57 0 0 chr5 7236148 7236183 -192393967 + AT_rich Low_complexity Low_complexity 1 35 0 2470 124 3 0 chr5 7237546 7237893 -192392257 + L1PA13 LINE L1 5802 6149 -14 3080 169 78 31 chr5 7238586 7238937 -192391213 - MER7C DNA MER2_type -2426 602 212 188 67 33 0 chr5 7238937 7238967 -192391183 + (TGAG)n Simple_repeat Simple_repeat 4 34 0 3080 169 78 31 chr5 7238967 7239190 -192390960 - MER7C DNA MER2_type -2816 212 1 512 307 88 47 chr5 7239191 7239614 -192390536 - LTR33 LTR ERVL -77 444 5 818 163 43 22 chr5 7239997 7240181 -192389969 + MER53 DNA DNA 2 189 0 1200 293 84 42 chr5 7240407 7240640 -192389510 - L2 LINE L2 0 3313 3091 2244 116 0 0 chr5 7240640 7240943 -192389207 - AluSq SINE Alu 0 313 11 1200 293 84 42 chr5 7240943 7241786 -192388364 - L2 LINE L2 -222 3091 2201 1204 275 44 6 chr5 7241792 7242112 -192388038 - LTR16A LTR ERVL -3 447 116 1910 181 3 0 chr5 7242223 7242532 -192387618 - AluSx SINE Alu -2 310 1 2304 109 7 0 chr5 7242550 7242854 -192387296 - AluSg SINE Alu -4 306 1 386 340 42 50 chr5 7242868 7243130 -192387020 + L2 LINE L2 1148 1407 -1907 3497 229 95 19 chr5 7244438 7245628 -192384522 - L1M4 LINE L1 -821 5325 4045 418 303 152 28 chr5 7252972 7253262 -192376888 - L2 LINE L2 -945 2369 2044 372 278 12 29 chr5 7253459 7253632 -192376518 + (CATG)n Simple_repeat Simple_repeat 2 171 0 331 240 10 83 chr5 7253660 7253852 -192376298 + (CATG)n Simple_repeat Simple_repeat 2 179 0 242 315 89 41 chr5 7254527 7254819 -192375331 + L1MC/D LINE L1 4474 4779 -1367 283 285 73 28 chr5 7255289 7255468 -192374682 + L1MC/D LINE L1 5314 5500 -2308 963 206 77 111 chr5 7255826 7256278 -192373872 + MLT1D LTR MaLR 69 505 0 239 189 38 0 chr5 7256735 7256788 -192373362 - MLT1K LTR MaLR -20 568 514 459 131 0 30 chr5 7257083 7257182 -192372968 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 24 0 0 0 chr5 7257574 7257598 -192372552 + AT_rich Low_complexity Low_complexity 1 24 0 360 64 0 0 chr5 7257631 7257678 -192372472 + (TA)n Simple_repeat Simple_repeat 1 47 0 1944 48 0 36 chr5 7257678 7257921 -192372229 - AluY SINE Alu -14 297 64 409 276 92 54 chr5 7258078 7258804 -192371346 - L1MEd LINE L1 -4613 1516 771 654 328 131 30 chr5 7259426 7259953 -192370197 + L2 LINE L2 2464 3049 -223 2191 78 14 4 chr5 7260605 7260886 -192369264 - AluSp SINE Alu -29 284 1 1203 130 27 0 chr5 7262054 7262239 -192367911 - L1PA15 LINE L1 -21 6144 5955 11639 214 17 30 chr5 7262239 7263774 -192366376 - L1P LINE L1 -913 5233 3748 1968 130 0 14 chr5 7263774 7264110 -192366040 - AluY SINE Alu 0 332 1 11639 214 17 30 chr5 7264110 7265342 -192364808 - L1P LINE L1 -2398 3748 2501 4857 216 23 15 chr5 7265345 7267166 -192362984 + L1P LINE L1 1326 3159 -3638 249 180 0 0 chr5 7267247 7267297 -192362853 + (CATA)n Simple_repeat Simple_repeat 2 51 0 643 294 150 25 chr5 7267923 7268720 -192361430 - L2 LINE L2 0 3313 2360 23 0 0 0 chr5 7270373 7270396 -192359754 + AT_rich Low_complexity Low_complexity 1 23 0 2281 108 0 0 chr5 7270529 7270834 -192359316 - AluSq SINE Alu -8 305 1 250 318 55 46 chr5 7271382 7271569 -192358581 - MIR SINE MIR -67 141 9 180 286 71 12 chr5 7273343 7273427 -192356723 - MIR SINE MIR -77 185 97 269 218 0 69 chr5 7273474 7273561 -192356589 + L1MC4 LINE L1 6641 6721 -1321 217 135 27 0 chr5 7273789 7273826 -192356324 + GA-rich Low_complexity Low_complexity 2 39 0 21 57 0 0 chr5 7274085 7274120 -192356030 + AT_rich Low_complexity Low_complexity 1 35 0 459 270 149 66 chr5 7274669 7275151 -192354999 - LTR33A LTR ERVL -1 522 1 259 179 18 0 chr5 7275940 7275996 -192354154 - LTR33A LTR ERVL 0 523 467 560 77 188 51 chr5 7276391 7276409 -192353741 - L1MA7 LINE L1 -3 6288 6274 2056 132 48 38 chr5 7276409 7276780 -192353370 + THE1C LTR MaLR 1 375 0 560 77 188 51 chr5 7276780 7276878 -192353272 - L1MA7 LINE L1 -17 6274 6156 485 333 101 16 chr5 7276883 7277201 -192352949 + MLT1L LTR MaLR 227 571 -44 402 21 0 0 chr5 7277864 7277911 -192352239 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1805 142 0 0 chr5 7277916 7278169 -192351981 - AluSx SINE Alu -59 253 1 1887 129 30 23 chr5 7278169 7278472 -192351678 - AluSx SINE Alu -7 305 1 189 375 116 0 chr5 7278516 7278628 -192351522 - L2 LINE L2 -22 3250 3126 2411 169 0 5 chr5 7279124 7279491 -192350659 + MLT1A1 LTR MaLR 1 365 0 2982 199 90 55 chr5 7279702 7280500 -192349650 - LTR1B LTR ERV1 0 826 1 304 130 0 0 chr5 7280885 7280931 -192349219 + MADE1 DNA Mariner 35 80 0 974 258 97 52 chr5 7281207 7281645 -192348505 - MLT1C LTR MaLR 0 467 5 1586 199 38 0 chr5 7281713 7281882 -192348268 - AluJo SINE Alu -14 298 112 198 0 0 0 chr5 7281882 7281904 -192348246 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1586 199 38 0 chr5 7281904 7282021 -192348129 - AluJo SINE Alu -200 112 1 202 264 128 111 chr5 7283460 7283813 -192346337 + L2 LINE L2 2560 2918 -396 587 207 8 0 chr5 7284135 7284256 -192345894 + MSTD LTR MaLR 275 396 0 244 263 132 9 chr5 7284258 7284372 -192345778 - HAL1 LINE L1 -1104 1403 1276 1251 246 153 25 chr5 7284387 7284826 -192345324 - MLT1D LTR MaLR -8 497 3 251 242 207 60 chr5 7284930 7285171 -192344979 - HAL1 LINE L1 -1334 1173 874 195 42 0 0 chr5 7285171 7285195 -192344955 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 251 242 207 60 chr5 7285195 7285267 -192344883 - HAL1 LINE L1 -1633 874 814 2034 39 0 0 chr5 7285443 7285673 -192344477 + L1PA5 LINE L1 5922 6151 -3 187 348 130 36 chr5 7286154 7286292 -192343858 + L2 LINE L2 3118 3268 -4 670 120 0 0 chr5 7286448 7286548 -192343602 + AluSg/x SINE Alu 208 307 -5 469 113 0 0 chr5 7287530 7287592 -192342558 - AluJ/FLAM SINE Alu -250 62 1 1510 267 100 28 chr5 7287606 7288542 -192341608 - L1MEd LINE L1 -3013 3116 2113 360 64 0 0 chr5 7288894 7288941 -192341209 + (TA)n Simple_repeat Simple_repeat 1 47 0 2036 47 0 28 chr5 7288941 7289196 -192340954 - AluY SINE Alu 0 311 64 421 281 90 53 chr5 7289352 7290092 -192340058 - L1MEd LINE L1 -4613 1516 756 478 211 8 29 chr5 7291563 7291812 -192338338 + CT-rich Low_complexity Low_complexity 1 243 0 559 163 11 0 chr5 7292158 7292250 -192337900 - MLT2B3 LTR ERVL -227 327 235 326 220 10 0 chr5 7292264 7292364 -192337786 + GA-rich Low_complexity Low_complexity 2 102 0 1370 170 13 9 chr5 7292364 7292594 -192337556 - MLT2B3 LTR ERVL -323 231 1 353 182 26 0 chr5 7292922 7292999 -192337151 + MER116 DNA Mariner 1 79 -1 2070 115 4 4 chr5 7294212 7294304 -192335846 - AluSc SINE Alu 0 395 304 198 0 0 0 chr5 7294304 7294326 -192335824 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2070 115 4 4 chr5 7294326 7294607 -192335543 - AluSc SINE Alu -90 305 1 358 299 0 9 chr5 7295373 7295480 -192334670 + MIR3 SINE MIR 87 192 -16 196 250 90 20 chr5 7296192 7296292 -192333858 + L2 LINE L2 3045 3151 -162 183 245 20 0 chr5 7296485 7296534 -192333616 + L3b LINE CR1 1306 1355 -228 567 299 127 21 chr5 7297232 7297523 -192332627 + L2 LINE L2 2992 3313 0 272 217 0 12 chr5 7301787 7301870 -192328280 + CT-rich Low_complexity Low_complexity 4 85 0 1952 157 7 0 chr5 7305335 7305640 -192324510 + AluSx SINE Alu 1 307 -5 543 301 36 18 chr5 7306198 7306417 -192323733 + LTR16C LTR ERVL 269 491 0 223 239 22 43 chr5 7306501 7306593 -192323557 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 360 0 0 0 chr5 7307433 7307473 -192322677 + (TG)n Simple_repeat Simple_repeat 2 41 0 327 289 67 21 chr5 7308333 7308527 -192321623 + LTR33 LTR ERVL 15 217 -304 1903 153 20 0 chr5 7309535 7309830 -192320320 - AluSx SINE Alu -11 301 1 182 269 60 104 chr5 7310438 7310572 -192319578 - L2 LINE L2 -436 2878 2751 2418 75 0 0 chr5 7310888 7311180 -192318970 + AluY SINE Alu 1 292 -19 3783 119 6 24 chr5 7311342 7311879 -192318271 + MER1A DNA MER1_type 1 527 0 27 81 0 0 chr5 7312042 7312104 -192318046 + AT_rich Low_complexity Low_complexity 1 62 0 214 191 0 0 chr5 7312420 7312462 -192317688 + (TTA)n Simple_repeat Simple_repeat 1 42 0 808 287 69 28 chr5 7312641 7312684 -192317466 + MLT1I LTR MaLR 2 42 -367 189 0 0 0 chr5 7312684 7312705 -192317445 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 808 287 69 28 chr5 7312705 7313051 -192317099 + MLT1I LTR MaLR 42 407 -2 282 73 0 0 chr5 7313158 7313199 -192316951 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 393 291 89 58 chr5 7313297 7313610 -192316540 + L1ME4a LINE L1 5625 5947 -174 24 67 0 0 chr5 7313711 7313756 -192316394 + AT_rich Low_complexity Low_complexity 1 45 0 321 303 35 64 chr5 7314397 7314711 -192315439 + L1MC/D LINE L1 3849 4153 -1993 210 211 0 28 chr5 7314882 7314953 -192315197 + (TAAA)n Simple_repeat Simple_repeat 2 70 0 188 176 28 28 chr5 7314956 7315064 -192315086 + (TTATA)n Simple_repeat Simple_repeat 5 112 0 244 326 82 31 chr5 7315153 7315444 -192314706 + L1MC/D LINE L1 4474 4779 -1367 633 329 74 18 chr5 7315914 7316358 -192313792 + L1MC/D LINE L1 5314 5782 -2026 26 30 0 0 chr5 7316761 7316794 -192313356 + AT_rich Low_complexity Low_complexity 1 33 0 2784 105 13 8 chr5 7317362 7317735 -192312415 + THE1C LTR MaLR 1 375 0 243 226 204 11 chr5 7318492 7318585 -192311565 + L2 LINE L2 3201 3311 -2 270 0 0 0 chr5 7318653 7318683 -192311467 + (TG)n Simple_repeat Simple_repeat 2 31 0 2753 115 0 10 chr5 7319861 7320245 -192309905 + MLT2A2 LTR ERVL 1 380 -73 324 167 12 24 chr5 7320245 7320329 -192309821 + (TATATG)n Simple_repeat Simple_repeat 5 87 0 408 19 38 0 chr5 7320329 7320382 -192309768 + MLT2A2 LTR ERVL 399 453 0 265 319 88 0 chr5 7320973 7321064 -192309086 - MLT1I LTR MaLR -173 236 138 1565 308 108 41 chr5 7321333 7322317 -192307833 + L2 LINE L2 1971 3020 -293 1581 251 52 34 chr5 7322318 7322876 -192307274 - L1MEc LINE L1 -3322 2893 2326 1411 111 0 5 chr5 7322876 7323074 -192307076 - AluSg/x SINE Alu 0 310 114 2396 64 3 22 chr5 7323202 7323513 -192306637 + AluY SINE Alu 1 305 -6 1499 150 75 4 chr5 7323520 7323773 -192306377 + AluSx SINE Alu 1 271 -41 502 167 0 12 chr5 7323789 7323873 -192306277 + AluSg/x SINE Alu 210 292 -20 735 274 89 35 chr5 7323877 7324395 -192305755 - L1MEc LINE L1 -4536 1860 1315 1751 149 0 31 chr5 7324406 7324757 -192305393 - AluSg SINE Alu 0 342 1 577 239 28 35 chr5 7324821 7324963 -192305187 - L1MEc LINE L1 -5825 571 431 375 234 16 81 chr5 7325085 7325209 -192304941 + L2 LINE L2 3198 3313 0 291 311 82 67 chr5 7328420 7328690 -192301460 - L3 LINE CR1 -701 876 603 21 0 0 0 chr5 7328959 7328980 -192301170 + AT_rich Low_complexity Low_complexity 1 21 0 1329 199 17 24 chr5 7329702 7329999 -192300151 + AluJo SINE Alu 1 295 -17 1166 247 150 71 chr5 7331360 7331934 -192298216 - MLT1E2 LTR MaLR -2 624 6 197 289 96 19 chr5 7332554 7332658 -192297492 + L3 LINE CR1 1465 1576 -1 327 177 0 0 chr5 7334219 7334281 -192295869 + GA-rich Low_complexity Low_complexity 2 63 0 559 203 27 27 chr5 7335160 7335308 -192294842 - LTR67 LTR ERVL -3 554 407 180 0 0 0 chr5 7335598 7335618 -192294532 + (A)n Simple_repeat Simple_repeat 1 20 0 218 311 0 0 chr5 7335644 7335689 -192294461 + L2 LINE L2 3139 3183 -89 282 189 11 67 chr5 7336748 7336838 -192293312 + (TCTA)n Simple_repeat Simple_repeat 1 85 0 257 277 71 45 chr5 7336975 7337130 -192293020 - MIR3 SINE MIR 0 208 50 1526 194 0 7 chr5 7338699 7339007 -192291143 - AluJb SINE Alu 0 306 1 306 173 29 0 chr5 7340449 7340598 -192289552 + (TA)n Simple_repeat Simple_repeat 1 153 0 185 0 40 0 chr5 7342111 7342136 -192288014 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 2298 78 3 3 chr5 7342153 7342437 -192287713 - AluSp SINE Alu -29 284 1 2305 82 0 0 chr5 7343235 7343516 -192286634 + AluY SINE Alu 1 281 -30 225 65 0 0 chr5 7343519 7343550 -192286600 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 703 244 153 41 chr5 7345285 7345444 -192284706 + MLT1F1 LTR MaLR 2 142 -400 1757 142 36 33 chr5 7345444 7345775 -192284375 + L1MA4A LINE L1 5966 6297 -6 703 244 153 41 chr5 7345775 7346113 -192284037 + MLT1F1 LTR MaLR 142 541 -1 377 274 17 28 chr5 7346528 7346707 -192283443 + (CATG)n Simple_repeat Simple_repeat 2 178 0 1187 331 141 14 chr5 7346900 7347568 -192282582 + L2 LINE L2 2044 2796 -518 4384 112 8 16 chr5 7348213 7348830 -192281320 + MER51A LTR ERV1 23 634 0 225 172 78 16 chr5 7350060 7350124 -192280026 - LTR13 LTR ERVK -292 715 648 903 205 58 99 chr5 7350457 7350534 -192279616 - L1MC5 LINE L1 -725 7236 7157 2486 78 0 0 chr5 7350534 7350840 -192279310 + AluY SINE Alu 1 306 -5 903 205 58 99 chr5 7350840 7351157 -192278993 - L1MC5 LINE L1 -804 7157 6858 468 277 15 0 chr5 7351239 7351369 -192278781 - L1MC5 LINE L1 -1132 6829 6698 243 223 62 77 chr5 7351368 7351498 -192278652 - HAL1 LINE L1 -159 2348 2221 * 1323 154 0 5 chr5 7351578 7351792 -192278358 - AluSg/x SINE Alu -13 297 85 1671 266 196 42 chr5 7351800 7353377 -192276773 - HAL1 LINE L1 -438 2069 250 186 298 12 48 chr5 7353714 7353798 -192276352 + L2 LINE L2 3233 3313 0 588 157 50 41 chr5 7354354 7354475 -192275675 + MLT1A2 LTR MaLR 199 320 -54 1707 236 25 9 chr5 7354630 7355021 -192275129 + MSTD LTR MaLR 9 396 0 271 273 30 20 chr5 7355584 7355683 -192274467 + L3 LINE CR1 1059 1158 -419 24 32 0 0 chr5 7356587 7356618 -192273532 + AT_rich Low_complexity Low_complexity 1 31 0 10175 227 69 31 chr5 7360200 7364585 -192265565 - L1MB8 LINE L1 -12 6977 2471 366 107 0 0 chr5 7364780 7364836 -192265314 + (TG)n Simple_repeat Simple_repeat 2 57 0 5571 236 72 38 chr5 7364839 7365362 -192264788 - L1MB8 LINE L1 -4607 2352 1848 2201 104 3 0 chr5 7365362 7365659 -192264491 - AluSc SINE Alu -11 298 1 5571 236 72 38 chr5 7365659 7366705 -192263445 - L1MB8 LINE L1 -5111 1848 683 315 0 0 0 chr5 7366705 7366740 -192263410 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 5571 236 72 38 chr5 7366740 7367434 -192262716 - L1MB8 LINE L1 -6276 683 14 345 248 90 28 chr5 7367859 7368004 -192262146 - MIR SINE MIR -48 214 61 2173 143 38 41 chr5 7368043 7368408 -192261742 + THE1B LTR MaLR 1 364 0 438 203 58 0 chr5 7370214 7370546 -192259604 + CT-rich Low_complexity Low_complexity 1 351 0 410 150 0 0 chr5 7370651 7370711 -192259439 + THE1B LTR MaLR 305 364 0 * 1240 161 187 22 chr5 7370711 7370973 -192259177 - MSTA LTR MaLR -122 306 1 185 283 0 0 chr5 7370998 7371044 -192259106 + L2 LINE L2 3210 3255 -17 195 42 0 0 chr5 7371044 7371068 -192259082 + (TTA)n Simple_repeat Simple_repeat 1 24 0 555 117 0 36 chr5 7371291 7371402 -192258748 + (TTCC)n Simple_repeat Simple_repeat 2 108 0 314 182 0 0 chr5 7371705 7371760 -192258390 + MLT1K LTR MaLR 514 568 -20 1005 205 75 110 chr5 7372233 7372686 -192257464 - MLT1D LTR MaLR 0 505 69 295 291 51 17 chr5 7372954 7373173 -192256977 + L1M4 LINE L1 4234 4459 -1687 183 315 62 23 chr5 7373409 7373539 -192256611 + MIR SINE MIR 14 148 -114 21 36 0 0 chr5 7373716 7373744 -192256406 + AT_rich Low_complexity Low_complexity 1 28 0 1084 191 57 30 chr5 7374165 7374395 -192255755 - MER46A DNA MER2_type 0 236 1 1976 195 61 127 chr5 7374652 7375395 -192254755 + LTR8A LTR ERV1 34 727 0 600 295 62 62 chr5 7375426 7375830 -192254320 + L2 LINE L2 2809 3212 -101 417 291 35 62 chr5 7376037 7376295 -192253855 + LTR16B LTR ERVL 214 464 0 2079 170 101 0 chr5 7377506 7377894 -192252256 - MSTA LTR MaLR 0 428 2 1489 242 13 32 chr5 7378039 7378411 -192251739 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr5 7379053 7379075 -192251075 + AT_rich Low_complexity Low_complexity 1 22 0 1429 241 51 8 chr5 7380704 7381078 -192249072 + MLT1C LTR MaLR 3 392 -75 226 232 63 11 chr5 7381483 7381578 -192248572 + CT-rich Low_complexity Low_complexity 1 100 0 253 158 63 0 chr5 7381582 7381677 -192248473 + (CCCTG)n Simple_repeat Simple_repeat 2 102 0 508 107 63 60 chr5 7381710 7382146 -192248004 + CT-rich Low_complexity Low_complexity 1 437 0 1046 254 70 53 chr5 7383427 7383786 -192246364 + MLT1A1 LTR MaLR 1 365 0 2453 165 19 36 chr5 7383979 7384521 -192245629 - LTR27 LTR ERV1 0 501 3 182 330 124 0 chr5 7384551 7384648 -192245502 + MIR SINE MIR 38 146 -62 2784 153 39 37 chr5 7384680 7385032 -192245118 - L1MB3 LINE L1 -36 6147 5792 2223 115 0 0 chr5 7385032 7385336 -192244814 + AluSc SINE Alu 1 304 -5 2784 153 39 37 chr5 7385336 7385524 -192244626 - L1MB3 LINE L1 -391 5792 5606 229 323 96 0 chr5 7386125 7386323 -192243827 + L1M4 LINE L1 3762 3978 -2168 555 271 0 0 chr5 7386361 7386483 -192243667 + MIR SINE MIR 12 133 -129 1937 153 134 28 chr5 7386504 7386628 -192243522 - MSTA LTR MaLR 0 428 319 1902 144 76 51 chr5 7386628 7386983 -192243167 + THE1B LTR MaLR 1 364 0 1937 153 134 28 chr5 7386983 7387245 -192242905 - MSTA LTR MaLR -109 319 1 185 283 0 0 chr5 7387270 7387316 -192242834 + L2 LINE L2 3210 3255 -17 195 42 0 0 chr5 7387316 7387340 -192242810 + (TTA)n Simple_repeat Simple_repeat 1 24 0 555 117 0 36 chr5 7387563 7387674 -192242476 + (TTCC)n Simple_repeat Simple_repeat 2 108 0 314 182 0 0 chr5 7387977 7388032 -192242118 + MLT1K LTR MaLR 514 568 -20 1092 212 77 90 chr5 7388505 7388948 -192241202 - MLT1D LTR MaLR 0 505 69 295 291 51 17 chr5 7389216 7389435 -192240715 + L1M4 LINE L1 4234 4459 -1687 183 315 62 23 chr5 7389670 7389800 -192240350 + MIR SINE MIR 14 148 -114 21 36 0 0 chr5 7389977 7390005 -192240145 + AT_rich Low_complexity Low_complexity 1 28 0 1098 187 57 30 chr5 7390426 7390656 -192239494 - MER46A DNA MER2_type 0 236 1 1974 196 65 128 chr5 7390913 7391654 -192238496 + LTR8A LTR ERV1 34 727 0 616 292 62 62 chr5 7391685 7392089 -192238061 + L2 LINE L2 2809 3212 -101 417 291 35 62 chr5 7392296 7392554 -192237596 + LTR16B LTR ERVL 214 464 0 2079 170 101 0 chr5 7393764 7394152 -192235998 - MSTA LTR MaLR 0 428 2 1517 239 13 32 chr5 7394297 7394669 -192235481 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr5 7395311 7395333 -192234817 + AT_rich Low_complexity Low_complexity 1 22 0 1465 235 51 8 chr5 7396959 7397333 -192232817 + MLT1C LTR MaLR 3 392 -75 2518 123 62 10 chr5 7397891 7398291 -192231859 - MSTA LTR MaLR -7 421 1 1253 223 56 68 chr5 7398411 7398875 -192231275 - MLT2D LTR ERVL -66 454 1 1455 182 78 4 chr5 7399073 7399342 -192230808 - AluJb SINE Alu -14 298 10 191 266 0 47 chr5 7400495 7400559 -192229591 + L2 LINE L2 3208 3268 -4 1619 177 67 0 chr5 7400604 7400887 -192229263 + AluJb SINE Alu 9 310 -2 327 322 11 0 chr5 7400950 7401040 -192229110 - MIR3 SINE MIR -43 165 75 200 293 88 66 chr5 7402728 7402909 -192227241 - L2 LINE L2 -96 3217 3033 508 347 82 48 chr5 7403559 7404172 -192225978 - L2 LINE L2 -784 2530 1887 1807 148 121 12 chr5 7404172 7404510 -192225640 + THE1C LTR MaLR 1 375 0 508 347 82 48 chr5 7404510 7404611 -192225539 - L2 LINE L2 -1427 1887 1791 322 260 52 0 chr5 7406276 7406372 -192223778 + MER5A DNA MER1_type 9 109 -80 28 61 0 0 chr5 7407794 7407843 -192222307 + AT_rich Low_complexity Low_complexity 1 49 0 325 306 59 41 chr5 7409108 7409278 -192220872 - MIR SINE MIR -83 179 7 244 241 19 0 chr5 7409472 7409526 -192220624 + L2 LINE L2 3257 3311 -2 395 287 47 16 chr5 7409608 7409737 -192220413 - MLT1J2 LTR MaLR -305 145 13 538 362 33 9 chr5 7409835 7410172 -192219978 - L2 LINE L2 -944 2370 2026 21 57 0 0 chr5 7410904 7410939 -192219211 + AT_rich Low_complexity Low_complexity 1 35 0 384 209 41 12 chr5 7411202 7411355 -192218795 + L1MA9 LINE L1 6021 6290 -7 1671 158 34 4 chr5 7411778 7412093 -192218057 - AluSx SINE Alu 0 333 11 189 244 22 0 chr5 7412635 7412680 -192217470 - L2 LINE L2 -10 3303 3258 673 254 0 0 chr5 7412814 7412940 -192217210 + FLAM_A SINE Alu 5 130 -3 299 245 19 19 chr5 7412957 7413063 -192217087 + (TA)n Simple_repeat Simple_repeat 2 107 0 300 53 0 0 chr5 7413572 7413610 -192216540 + (TTTTC)n Simple_repeat Simple_repeat 2 39 0 1057 228 58 67 chr5 7413630 7414150 -192216000 - MLT2D LTR ERVL 0 520 1 2464 166 74 21 chr5 7414499 7414933 -192215217 - MSTB2 LTR MaLR 0 457 1 2131 108 3 7 chr5 7415026 7415321 -192214829 - AluSg1 SINE Alu -15 294 1 462 49 0 0 chr5 7415340 7415401 -192214749 + (CA)n Simple_repeat Simple_repeat 2 62 0 237 314 19 38 chr5 7415416 7415521 -192214629 - MIR3 SINE MIR -94 114 12 3061 169 60 3 chr5 7415864 7416431 -192213719 - MER6A DNA MER2_type -6 599 1 1899 147 0 33 chr5 7416877 7417176 -192212974 - AluSx SINE Alu -23 289 1 1499 224 153 20 chr5 7418187 7418488 -192211662 + MLT1D LTR MaLR 1 381 -124 186 71 0 0 chr5 7418488 7418516 -192211634 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1499 224 153 20 chr5 7418516 7418660 -192211490 + MLT1D LTR MaLR 381 505 0 15221 222 19 25 chr5 7418859 7424428 -192205722 - L1PA15 LINE L1 -1 6815 1262 774 290 81 39 chr5 7424461 7424795 -192205355 - L1PA15 LINE L1 -6032 755 408 709 276 91 53 chr5 7425029 7425479 -192204671 - MLT1C LTR MaLR 0 467 1 191 186 34 34 chr5 7425778 7425837 -192204313 - MIR SINE MIR -63 145 87 400 302 118 12 chr5 7426123 7426292 -192203858 - MIR SINE MIR -48 214 28 22 0 0 0 chr5 7426476 7426498 -192203652 + AT_rich Low_complexity Low_complexity 1 22 0 216 67 0 0 chr5 7427615 7427645 -192202505 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 309 322 113 0 chr5 7428196 7428311 -192201839 + L2 LINE L2 3145 3272 0 285 296 170 18 chr5 7428510 7428733 -192201417 + MIR SINE MIR 4 260 -2 2102 111 0 27 chr5 7429363 7429660 -192200490 - AluSg SINE Alu -21 289 1 189 299 37 65 chr5 7429868 7429975 -192200175 + L2 LINE L2 3154 3257 -15 882 256 106 41 chr5 7430400 7430889 -192199261 + LTR33 LTR ERVL 1 521 0 524 222 120 24 chr5 7431036 7431203 -192198947 - MLT1J2 LTR MaLR -267 183 1 496 269 86 0 chr5 7431899 7432085 -192198065 + LTR16C LTR ERVL 286 487 -4 308 24 24 0 chr5 7432492 7432533 -192197617 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1558 164 4 14 chr5 7432841 7433116 -192197034 + AluJo SINE Alu 19 290 -22 1346 31 9 0 chr5 7433776 7433998 -192196152 + (TGAG)n Simple_repeat Simple_repeat 1 224 0 199 0 0 61 chr5 7435509 7435542 -192194608 + (TG)n Simple_repeat Simple_repeat 2 32 0 318 269 175 18 chr5 7436118 7436289 -192193861 + L2 LINE L2 2147 2344 -970 417 271 46 30 chr5 7436392 7436626 -192193524 + L1MC4 LINE L1 7823 7995 0 2099 95 6 63 chr5 7436641 7436956 -192193194 + AluSq SINE Alu 5 301 -12 391 377 54 14 chr5 7437344 7437694 -192192456 + L1MEd LINE L1 284 647 -5472 816 113 8 6 chr5 7437814 7437929 -192192221 + MSTB LTR MaLR 3 116 -312 2128 132 21 66 chr5 7437929 7438309 -192191841 - THE1B LTR MaLR 0 364 2 12771 85 6 2 chr5 7438310 7439884 -192190266 - THE1B-int LTR MaLR 0 1580 1 283 86 0 0 chr5 7439884 7439919 -192190231 - THE1B LTR MaLR 0 355 321 303 246 49 55 chr5 7440327 7440416 -192189734 + L1MEd LINE L1 2192 2280 -3849 1096 224 121 44 chr5 7440416 7440755 -192189395 - MLT1A1 LTR MaLR 0 365 1 303 246 49 55 chr5 7440755 7440848 -192189302 + L1MEd LINE L1 2280 2373 -3756 35 83 0 0 chr5 7440883 7440967 -192189183 + AT_rich Low_complexity Low_complexity 1 84 0 945 311 136 60 chr5 7440974 7441183 -192188967 + L1MEd LINE L1 2425 2617 -3512 2297 104 0 7 chr5 7441183 7441480 -192188670 - AluSg SINE Alu -15 295 1 945 311 136 60 chr5 7441480 7441940 -192188210 + L1MEd LINE L1 2617 3041 -3088 1789 174 7 3 chr5 7441940 7442239 -192187911 - AluJb SINE Alu -12 300 1 945 311 136 60 chr5 7442239 7443173 -192186977 + L1MEd LINE L1 3041 4150 -1979 264 331 61 13 chr5 7443188 7443358 -192186792 + L1MEd LINE L1 4194 4354 -1775 2188 111 0 7 chr5 7443358 7443665 -192186485 + AluSg SINE Alu 1 305 -5 264 331 61 13 chr5 7443665 7443805 -192186345 + L1MEd LINE L1 4354 4519 -1610 300 300 36 70 chr5 7444046 7444376 -192185774 + L1MEc LINE L1 498 816 -5580 2630 208 65 50 chr5 7444498 7445095 -192185055 - MER82 DNA MER2_type -46 607 2 320 356 95 11 chr5 7445403 7445667 -192184483 + L1ME LINE L1 259 544 -5526 300 156 31 0 chr5 7445980 7446044 -192184106 + L1MA7 LINE L1 6226 6291 0 301 228 65 22 chr5 7447859 7447951 -192182199 - MIR SINE MIR -48 214 119 1197 286 130 12 chr5 7448277 7448784 -192181366 - MLT1F1 LTR MaLR 0 567 1 1436 316 36 30 chr5 7449004 7449128 -192181022 + MLT1G1 LTR MaLR 1 123 -472 2136 191 14 3 chr5 7449128 7449485 -192180665 - MLT1A1 LTR MaLR -4 361 1 1436 316 36 30 chr5 7449485 7449886 -192180264 + MLT1G1 LTR MaLR 123 529 -66 985 257 168 32 chr5 7449887 7450362 -192179788 + L1ME2 LINE L1 5623 6162 -2 277 313 75 0 chr5 7451426 7451560 -192178590 + Charlie7 DNA MER1_type 261 404 -2208 1743 293 26 26 chr5 7451676 7452297 -192177853 + L1MEc LINE L1 35 658 -5738 1883 81 102 42 chr5 7452297 7452580 -192177570 - AluY SINE Alu -11 300 1 1743 293 26 26 chr5 7452580 7452674 -192177476 + L1MEc LINE L1 657 750 -5646 302 229 19 57 chr5 7452674 7452779 -192177371 + Charlie7 DNA MER1_type 424 524 -2088 375 311 40 13 chr5 7452792 7452943 -192177207 + L2 LINE L2 2935 3089 -224 231 380 0 0 chr5 7452993 7453064 -192177086 - L2 LINE L2 -59 3213 3143 391 231 22 52 chr5 7453122 7453256 -192176894 + Charlie7 DNA MER1_type 556 685 -1927 232 125 0 42 chr5 7454100 7454148 -192176002 - LTR66 LTR ERVL -171 439 394 1794 150 0 24 chr5 7455065 7455359 -192174791 + AluSx SINE Alu 11 297 -15 278 355 142 18 chr5 7456501 7456783 -192173367 - L3 LINE CR1 -3 1574 1258 600 279 83 10 chr5 7456812 7457127 -192173023 + L1ME3 LINE L1 5815 6158 -12 2529 142 61 0 chr5 7457866 7458261 -192171889 + MSTA LTR MaLR 1 419 -9 302 344 103 43 chr5 7458426 7459059 -192171091 - L2 LINE L2 -556 2758 2088 3785 200 46 12 chr5 7459194 7459948 -192170202 - MLT-int LTR MaLR -955 780 1 307 259 82 0 chr5 7459978 7460063 -192170087 - MLT2B1 LTR ERVL -59 461 370 3840 128 37 37 chr5 7460074 7460716 -192169434 + MER4D LTR ERV1 141 782 -90 699 125 8 25 chr5 7460709 7460829 -192169321 - MER4D LTR ERV1 -785 118 1 * 273 128 0 0 chr5 7463159 7463206 -192166944 + (TG)n Simple_repeat Simple_repeat 2 48 0 2283 73 20 3 chr5 7463672 7463851 -192166299 - AluY SINE Alu -6 305 118 495 33 0 0 chr5 7463851 7463912 -192166238 + (TG)n Simple_repeat Simple_repeat 2 62 0 2283 73 20 3 chr5 7463912 7464032 -192166118 - AluY SINE Alu -193 118 1 205 305 102 0 chr5 7464619 7464737 -192165413 - MIR SINE MIR -74 188 59 * 250 311 56 28 chr5 7464669 7464849 -192165301 - L2 LINE L2 -355 2959 2775 396 0 0 0 chr5 7465256 7465300 -192164850 + (TG)n Simple_repeat Simple_repeat 2 45 0 744 182 8 8 chr5 7465749 7465881 -192164269 - FRAM SINE Alu -11 165 34 227 311 8 25 chr5 7466297 7466419 -192163731 - L1MEd LINE L1 -5947 172 53 234 0 0 0 chr5 7466429 7466455 -192163695 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 636 311 34 0 chr5 7466463 7466672 -192163478 + MIR SINE MIR 2 217 -45 594 54 14 0 chr5 7468565 7468639 -192161511 + MER4B LTR ERV1 528 602 -8 1351 226 43 48 chr5 7471438 7471810 -192158340 + MLT1A2 LTR MaLR 4 373 -1 235 217 17 17 chr5 7472046 7472106 -192158044 - MIR SINE MIR -117 145 86 256 278 120 0 chr5 7474029 7474137 -192156013 - L1ME4a LINE L1 -2 6119 5999 465 293 6 13 chr5 7475911 7476068 -192154082 - L1ME1 LINE L1 -5 6161 6006 * 2404 263 92 4 chr5 7476063 7476886 -192153264 + L1M4 LINE L1 3909 4804 -1342 1877 272 72 47 chr5 7476883 7479121 -192151029 - L1ME LINE L1 -3387 2693 390 * 258 262 24 0 chr5 7479522 7479606 -192150544 - L1ME LINE L1 -5933 137 52 268 242 67 67 chr5 7479806 7479926 -192150224 - MIR SINE MIR 0 262 143 1302 177 262 12 chr5 7479926 7480095 -192150055 - MSTA LTR MaLR 0 428 302 189 0 0 0 chr5 7480095 7480116 -192150034 + (GA)n Simple_repeat Simple_repeat 1 21 0 1302 177 262 12 chr5 7480116 7480274 -192149876 - MSTA LTR MaLR -125 303 19 638 148 289 0 chr5 7480285 7480420 -192149730 + MSTA LTR MaLR 3 176 -252 2044 102 26 22 chr5 7480420 7480733 -192149417 + MSTA-int LTR MaLR 1267 1580 0 647 160 0 25 chr5 7480733 7480852 -192149298 + MSTA LTR MaLR 1 116 -312 419 143 0 0 chr5 7480839 7480902 -192149248 + MSTA LTR MaLR 366 428 0 * 283 354 77 0 chr5 7480902 7481032 -192149118 - MIR SINE MIR -115 147 8 364 297 71 23 chr5 7482059 7482325 -192147825 - L1M4 LINE L1 -3171 2975 2697 23 33 0 0 chr5 7482904 7482934 -192147216 + AT_rich Low_complexity Low_complexity 1 30 0 2197 259 28 44 chr5 7483056 7483123 -192147027 + L1MC4 LINE L1 7213 7280 -762 2623 125 8 3 chr5 7483123 7483484 -192146666 + THE1B LTR MaLR 1 363 -1 2197 259 28 44 chr5 7483484 7483974 -192146176 + L1MC4 LINE L1 7280 7738 -304 2171 113 0 0 chr5 7483974 7484257 -192145893 + AluSq SINE Alu 5 287 -26 2197 259 28 44 chr5 7484257 7484551 -192145599 + L1MC4 LINE L1 7738 8035 -7 210 118 0 0 chr5 7487673 7487707 -192142443 + (TC)n Simple_repeat Simple_repeat 1 34 0 2313 136 33 25 chr5 7489444 7489805 -192140345 + THE1B LTR MaLR 1 364 0 6313 211 27 37 chr5 7490179 7492852 -192137298 + L1MC1 LINE L1 3376 6019 -314 6904 137 8 64 chr5 7493979 7495072 -192135078 + HSMAR2 DNA Mariner 2 1018 -284 2111 128 0 7 chr5 7495072 7495368 -192134782 - AluSx SINE Alu -18 294 1 6904 137 8 64 chr5 7495368 7495527 -192134623 + HSMAR2 DNA Mariner 1018 1184 -118 308 358 42 0 chr5 7495847 7495967 -192134183 - MER5B DNA MER1_type -33 145 21 2548 158 58 16 chr5 7496068 7496516 -192133634 + MLT1C LTR MaLR 1 467 0 2125 122 0 3 chr5 7497975 7498269 -192131881 - AluSx SINE Alu -11 301 9 3665 74 4 13 chr5 7499162 7499636 -192130514 - L1PA7 LINE L1 0 6154 5685 1932 48 9 0 chr5 7499636 7499865 -192130285 + L1PA7 LINE L1 5449 5679 -475 1533 239 12 6 chr5 7499865 7500196 -192129954 - MER58B DNA MER1_type -8 333 1 551 191 48 34 chr5 7500482 7500629 -192129521 - MER103 DNA DNA -16 150 2 3858 139 7 2 chr5 7501261 7501815 -192128335 - MER41D LTR ERV1 0 557 1 318 240 50 0 chr5 7502516 7502616 -192127534 + CT-rich Low_complexity Low_complexity 1 105 0 417 290 111 12 chr5 7502863 7503025 -192127125 - L3b LINE CR1 -63 1520 1343 220 261 0 31 chr5 7503910 7503975 -192126175 - MER5A DNA MER1_type -119 70 8 385 260 10 102 chr5 7504171 7504367 -192125783 + MER5B DNA MER1_type 1 178 0 26 30 0 0 chr5 7504609 7504642 -192125508 + AT_rich Low_complexity Low_complexity 1 33 0 419 177 104 0 chr5 7505012 7505108 -192125042 + L1MB5 LINE L1 5620 5725 -449 5315 145 34 14 chr5 7505122 7506004 -192124146 + MER49 LTR ERV1 24 923 0 1976 197 28 30 chr5 7506004 7506113 -192124037 + L1MB5 LINE L1 5722 5830 -344 2114 125 0 3 chr5 7506113 7506416 -192123734 + AluSx SINE Alu 1 302 -10 1976 197 28 30 chr5 7506416 7506743 -192123407 + L1MB5 LINE L1 5830 6157 -17 631 256 45 5 chr5 7506765 7506964 -192123186 - L2 LINE L2 -157 3156 2950 388 296 0 0 chr5 7507515 7507630 -192122520 + MIR SINE MIR 20 134 -128 423 262 0 0 chr5 7507653 7507798 -192122352 + (CA)n Simple_repeat Simple_repeat 2 146 0 480 256 0 0 chr5 7507820 7507976 -192122174 + (CA)n Simple_repeat Simple_repeat 1 156 0 2788 108 11 0 chr5 7508782 7509153 -192120997 + THE1C LTR MaLR 1 375 0 211 263 90 15 chr5 7510316 7510449 -192119701 + L2 LINE L2 2750 2892 -422 342 188 52 52 chr5 7510751 7510847 -192119303 + L2 LINE L2 3169 3264 -49 222 220 0 0 chr5 7510872 7510931 -192119219 + GA-rich Low_complexity Low_complexity 4 62 0 2010 131 84 73 chr5 7512341 7512641 -192117509 + LTR34 LTR ERV1 1 309 -390 1686 141 80 29 chr5 7512641 7512917 -192117233 - AluSg SINE Alu -20 290 1 2010 131 84 73 chr5 7512917 7513082 -192117068 + LTR34 LTR ERV1 309 471 -228 1435 75 27 0 chr5 7513087 7513273 -192116877 + MER30 DNA MER1_type 6 196 -34 878 188 81 22 chr5 7513289 7513512 -192116638 + LTR34 LTR ERV1 464 699 0 1503 199 192 12 chr5 7515039 7515446 -192114704 + MLT2B1 LTR ERVL 1 480 -40 2234 102 30 25 chr5 7515449 7515992 -192114158 + MER51A LTR ERV1 1 634 0 294 295 11 0 chr5 7517991 7518086 -192112064 + MIR SINE MIR 77 172 -90 345 315 47 7 chr5 7518092 7518241 -192111909 + MIR SINE MIR 108 262 0 469 233 23 39 chr5 7518637 7518766 -192111384 + MER5A DNA MER1_type 63 189 0 753 268 13 31 chr5 7518771 7518937 -192111213 + MER58A DNA MER1_type 1 163 -2257 2255 147 50 21 chr5 7518937 7519374 -192110776 - LTR7 LTR ERV1 0 450 1 753 268 13 31 chr5 7519374 7519435 -192110715 + MER58A DNA MER1_type 163 224 0 265 304 193 12 chr5 7520560 7520721 -192109429 + MLT1H1 LTR MaLR 76 265 -290 4440 98 21 2 chr5 7520844 7521458 -192108692 + MER41B LTR ERV1 1 626 -9 292 202 185 53 chr5 7521482 7521655 -192108495 + MLT1H1 LTR MaLR 354 554 -1 1750 20 0 0 chr5 7521967 7522165 -192107985 - L1PA4 LINE L1 -2 6153 5956 1489 6 0 0 chr5 7522165 7522328 -192107822 + L1PA4 LINE L1 5781 5943 -212 1284 19 0 37 chr5 7523446 7523608 -192106542 + L1PA4 LINE L1 6000 6155 0 2015 255 48 14 chr5 7523675 7524484 -192105666 + L1ME1 LINE L1 4285 5121 -1025 1416 207 155 17 chr5 7524528 7524575 -192105575 - MSTD LTR MaLR 0 396 357 2740 126 34 0 chr5 7524575 7524989 -192105161 + MSTA LTR MaLR 1 428 0 1416 207 155 17 chr5 7524989 7525289 -192104861 - MSTD LTR MaLR -39 357 1 3364 235 40 23 chr5 7525289 7525441 -192104709 + L1ME1 LINE L1 5179 5327 -839 2135 140 0 3 chr5 7525441 7525748 -192104402 - AluSg SINE Alu -4 306 1 3364 235 40 23 chr5 7525748 7526531 -192103619 + L1ME1 LINE L1 5327 6117 -49 28 29 0 0 chr5 7526749 7526784 -192103366 + AT_rich Low_complexity Low_complexity 1 35 0 558 299 7 0 chr5 7528599 7528743 -192101407 + MIR SINE MIR 13 157 -105 434 183 17 126 chr5 7529629 7529729 -192100421 + MLT1D LTR MaLR 1 76 -429 1999 194 3 6 chr5 7529729 7530095 -192100055 - MLT1A1 LTR MaLR 0 365 1 434 183 17 126 chr5 7530095 7530169 -192099981 + MLT1D LTR MaLR 76 156 -349 261 0 0 0 chr5 7530186 7530215 -192099935 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1004 138 0 0 chr5 7530216 7530361 -192099789 - AluSg/x SINE Alu -33 279 135 817 229 124 1 chr5 7530395 7530620 -192099530 + MLT1D LTR MaLR 226 505 0 608 262 29 14 chr5 7532085 7532295 -192097855 + MER20 DNA MER1_type 4 216 -3 2284 107 0 0 chr5 7533261 7533571 -192096579 + AluSx SINE Alu 1 310 -2 190 308 33 0 chr5 7535217 7535308 -192094842 + MIR SINE MIR 49 142 -120 214 306 74 8 chr5 7536199 7536320 -192093830 + L2 LINE L2 3184 3312 -1 205 229 0 49 chr5 7536672 7536733 -192093417 + GA-rich Low_complexity Low_complexity 1 58 0 935 214 45 67 chr5 7537361 7537674 -192092476 - MLT1B LTR MaLR 0 390 85 180 295 16 0 chr5 7537730 7537791 -192092359 - L2 LINE L2 -562 2752 2691 547 125 0 0 chr5 7537914 7537994 -192092156 - MADE1 DNA Mariner 0 80 1 21 0 0 0 chr5 7538472 7538493 -192091657 + AT_rich Low_complexity Low_complexity 1 21 0 781 239 91 0 chr5 7539462 7539692 -192090458 + MIR SINE MIR 12 262 0 21 36 0 0 chr5 7539819 7539847 -192090303 + AT_rich Low_complexity Low_complexity 1 28 0 2253 108 0 0 chr5 7539977 7540264 -192089886 + AluSx SINE Alu 1 287 -25 217 302 54 39 chr5 7540652 7540781 -192089369 + L2 LINE L2 2927 3057 -256 2087 244 30 38 chr5 7540950 7540988 -192089162 - MER90 LTR ERV1 -4 610 573 1847 207 11 3 chr5 7540988 7541350 -192088800 + MLT1A1 LTR MaLR 1 365 0 2087 244 30 38 chr5 7541350 7541922 -192088228 - MER90 LTR ERV1 -41 573 5 186 43 0 0 chr5 7541967 7541990 -192088160 + (T)n Simple_repeat Simple_repeat 1 23 0 324 0 0 0 chr5 7542077 7542113 -192088037 + (TG)n Simple_repeat Simple_repeat 2 37 0 970 243 58 29 chr5 7542127 7542440 -192087710 - MER2 DNA MER2_type -20 325 4 284 164 0 82 chr5 7542454 7542527 -192087623 + MLT2B1 LTR ERVL 454 520 0 498 104 14 49 chr5 7543452 7543596 -192086554 + (TA)n Simple_repeat Simple_repeat 2 140 0 214 167 46 56 chr5 7543600 7543708 -192086442 + (TTATA)n Simple_repeat Simple_repeat 2 108 0 325 281 0 15 chr5 7545338 7545473 -192084677 + (CA)n Simple_repeat Simple_repeat 2 134 0 184 254 9 9 chr5 7545485 7545599 -192084551 + (CA)n Simple_repeat Simple_repeat 1 114 0 1763 214 63 0 chr5 7546011 7546389 -192083761 + MER57A LTR ERV1 1 402 -1 285 291 3 11 chr5 7547265 7547366 -192082784 - MIR SINE MIR -87 121 20 182 313 15 0 chr5 7548452 7548519 -192081631 - MIR3 SINE MIR -30 178 111 2195 108 60 28 chr5 7548663 7549016 -192081134 - THE1B LTR MaLR 0 364 1 11455 103 10 1 chr5 7549016 7550582 -192079568 - THE1B-int LTR MaLR 0 1580 1 2274 102 54 23 chr5 7550582 7550935 -192079215 - THE1B LTR MaLR 0 364 1 1777 148 14 11 chr5 7551265 7551543 -192078607 + AluSg SINE Alu 14 292 -18 1098 182 5 0 chr5 7551570 7551762 -192078388 + L1PB1 LINE L1 3 195 -6668 14486 154 49 12 chr5 7551765 7557765 -192072385 + L1PB1 LINE L1 634 6866 -1 2680 136 2 5 chr5 7558176 7558581 -192071569 + MSTA-int LTR MaLR 1248 1651 0 2364 119 107 20 chr5 7558581 7558975 -192071175 + MSTA LTR MaLR 1 428 0 224 261 15 15 chr5 7559060 7559125 -192071025 + L2 LINE L2 3203 3267 -5 1082 235 90 36 chr5 7560440 7561049 -192069101 - MER76 LTR ERV -6 682 3 372 170 51 20 chr5 7561183 7561450 -192068700 + (TA)n Simple_repeat Simple_repeat 1 275 0 217 311 54 0 chr5 7562130 7562204 -192067946 - L2 LINE L2 -229 3043 2966 1620 229 103 63 chr5 7562267 7563017 -192067133 - L1ME3 LINE L1 -85 6077 5298 5502 150 45 15 chr5 7563081 7563983 -192066167 - L1PB1 LINE L1 -1 6150 5136 2198 107 0 41 chr5 7563983 7564301 -192065849 + AluSg SINE Alu 1 305 -5 5502 150 45 15 chr5 7564301 7564563 -192065587 - L1PB1 LINE L1 -1015 5136 4883 442 245 161 10 chr5 7564572 7564764 -192065386 + L1M4 LINE L1 3080 3300 -2846 307 233 207 9 chr5 7564916 7565032 -192065118 + L1M4 LINE L1 4484 4622 -1524 670 211 28 22 chr5 7565052 7565232 -192064918 - L1ME3 LINE L1 -1542 4604 4424 22 35 0 0 chr5 7565683 7565712 -192064438 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr5 7566686 7566718 -192063432 + AT_rich Low_complexity Low_complexity 1 32 0 2188 97 3 7 chr5 7566894 7567182 -192062968 + AluSq SINE Alu 14 300 -13 348 252 53 30 chr5 7568192 7568323 -192061827 - LTR16A LTR ERVL -84 366 233 2010 233 45 11 chr5 7568548 7568991 -192061159 - MLT1C LTR MaLR -9 458 1 648 218 292 9 chr5 7569033 7569628 -192060522 - LTR50 LTR ERVL -1 794 9 1385 176 77 35 chr5 7570660 7570972 -192059178 - MLT1A1 LTR MaLR -2 363 39 249 83 0 0 chr5 7571167 7571203 -192058947 + (TTG)n Simple_repeat Simple_repeat 1 36 0 863 169 0 26 chr5 7571203 7571332 -192058818 - AluJo SINE Alu -49 263 135 2071 118 35 3 chr5 7571332 7571620 -192058530 - AluSx SINE Alu -15 297 1 863 169 0 26 chr5 7571620 7571633 -192058517 - AluJo SINE Alu -177 135 123 204 67 0 0 chr5 7571638 7571668 -192058482 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 36 0 0 0 chr5 7571668 7571704 -192058446 + AT_rich Low_complexity Low_complexity 1 36 0 345 194 0 0 chr5 7571704 7571766 -192058384 - AluJo SINE Alu -169 133 72 208 356 0 14 chr5 7571954 7572027 -192058123 + MIR SINE MIR 22 93 -169 329 271 232 13 chr5 7572415 7572570 -192057580 - MIR SINE MIR -17 245 57 1177 227 139 17 chr5 7573297 7573505 -192056645 - MSTD LTR MaLR 0 396 215 2231 120 3 0 chr5 7573505 7573806 -192056344 - AluSx SINE Alu -10 302 1 1177 227 139 17 chr5 7573806 7573949 -192056201 - MSTD LTR MaLR -181 215 2 236 330 18 0 chr5 7574799 7574911 -192055239 + L1MB7 LINE L1 1372 1485 -4899 214 125 42 0 chr5 7574911 7574959 -192055191 + (TA)n Simple_repeat Simple_repeat 1 50 0 221 29 0 57 chr5 7574991 7575026 -192055124 + (CAGAGA)n Simple_repeat Simple_repeat 4 36 0 538 333 143 28 chr5 7575038 7575725 -192054425 + L1MB7 LINE L1 1667 2432 -4131 875 282 109 30 chr5 7575796 7576339 -192053811 + L1MB7 LINE L1 4056 4641 -1741 14144 72 6 17 chr5 7576371 7578193 -192051957 - HERVL LTR ERVL -350 5304 3503 9116 76 26 1 chr5 7578198 7579353 -192050797 - HERVL LTR ERVL -2424 3230 2047 630 78 0 0 chr5 7580234 7580311 -192049839 - MADE1 DNA Mariner 0 80 4 2099 152 0 0 chr5 7580619 7580922 -192049228 + AluSx SINE Alu 1 303 -9 215 170 43 0 chr5 7581824 7581871 -192048279 + GA-rich Low_complexity Low_complexity 1 49 0 581 215 90 42 chr5 7583340 7583484 -192046666 + MER106B DNA MER1_type 1 151 -908 238 214 0 0 chr5 7583505 7583547 -192046603 + MER106B DNA MER1_type 1018 1059 0 3622 201 47 17 chr5 7583581 7584233 -192045917 + L1MB7 LINE L1 5383 6083 -337 1207 144 55 15 chr5 7584233 7584435 -192045715 + MER6B DNA MER2_type 1 210 0 3622 201 47 17 chr5 7584435 7584753 -192045397 + L1MB7 LINE L1 6083 6390 -30 297 355 0 0 chr5 7586026 7586133 -192044017 - L3b LINE CR1 -228 1355 1249 232 308 0 0 chr5 7589553 7589618 -192040532 + T-rich Low_complexity Low_complexity 1 65 0 379 287 63 40 chr5 7589781 7590348 -192039802 - L1ME LINE L1 -265 5856 5257 2183 178 11 13 chr5 7591051 7591427 -192038723 + THE1C LTR MaLR 1 375 0 886 303 27 30 chr5 7593019 7593349 -192036801 + LTR16A LTR ERVL 122 450 0 2017 158 0 0 chr5 7593859 7594163 -192035987 + AluSx SINE Alu 1 304 -8 517 111 0 0 chr5 7594206 7594278 -192035872 + AluS SINE Alu 232 303 -8 2291 48 4 0 chr5 7594383 7594651 -192035499 + L1PA5 LINE L1 5886 6154 0 439 147 8 9 chr5 7594651 7594760 -192035390 + L1M2 LINE L1 5597 5778 -513 41 0 0 0 chr5 7594766 7594807 -192035343 + AT_rich Low_complexity Low_complexity 1 41 0 8779 216 53 13 chr5 7594831 7597283 -192032867 + L1MA7 LINE L1 3084 5647 -1918 325 149 89 18 chr5 7597412 7597580 -192032570 + (TA)n Simple_repeat Simple_repeat 1 180 0 * 377 178 46 36 chr5 7597475 7597803 -192032347 + (TTATA)n Simple_repeat Simple_repeat 1 331 0 6175 147 28 27 chr5 7597823 7599523 -192030627 + L1MA7 LINE L1 5644 7337 -373 3367 33 5 18 chr5 7599526 7599923 -192030227 - L1PA4 LINE L1 0 6155 5764 2084 174 16 8 chr5 7599925 7600311 -192029839 + L1MA7 LINE L1 7321 7709 -1 549 288 47 56 chr5 7600857 7601111 -192029039 - MIR SINE MIR -16 246 3 596 186 18 0 chr5 7602492 7602605 -192027545 - L1P4 LINE L1 -549 5619 5505 465 240 0 56 chr5 7602606 7602731 -192027419 + MLT1A1 LTR MaLR 246 363 -2 379 269 0 21 chr5 7602733 7602826 -192027324 - MLT1A1 LTR MaLR -272 93 3 22 0 0 0 chr5 7604383 7604405 -192025745 + AT_rich Low_complexity Low_complexity 1 22 0 243 0 0 0 chr5 7604470 7604497 -192025653 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1005 93 29 88 chr5 7604497 7604702 -192025448 - L1PA10 LINE L1 -13 6155 5963 1616 127 14 113 chr5 7604817 7605163 -192024987 - LTR9 LTR ERV1 -300 312 1 236 293 0 13 chr5 7605186 7605261 -192024889 + MLT-int LTR MaLR 935 1008 -727 2037 194 48 68 chr5 7605291 7605775 -192024375 + MLT1A1-int LTR MaLR 1254 1727 -8 2038 159 21 40 chr5 7605782 7606154 -192023996 + MLT1A1 LTR MaLR 1 365 0 279 271 51 25 chr5 7607887 7608005 -192022145 - MIR SINE MIR -72 136 16 1014 179 72 9 chr5 7608409 7608632 -192021518 + L1MC2 LINE L1 6099 6335 -9 2072 137 7 0 chr5 7609827 7610133 -192020017 - AluSx SINE Alu -4 308 1 2349 181 34 79 chr5 7610706 7610963 -192019187 - MER41C LTR ERV1 -1 634 367 2260 142 129 5 chr5 7610963 7611344 -192018806 + MSTA LTR MaLR 1 428 0 2349 181 34 79 chr5 7611344 7611702 -192018448 - MER41C LTR ERV1 -268 367 1 1276 196 86 65 chr5 7612219 7612601 -192017549 + MLT1B LTR MaLR 1 390 0 22 35 0 0 chr5 7614445 7614474 -192015676 + AT_rich Low_complexity Low_complexity 1 29 0 2575 108 5 24 chr5 7616241 7616612 -192013538 + THE1B LTR MaLR 1 364 0 351 0 0 0 chr5 7617172 7617211 -192012939 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 954 255 180 19 chr5 7620530 7620902 -192009248 + MLT1H LTR MaLR 1 432 -117 214 293 19 24 chr5 7620904 7621013 -192009137 - MIR SINE MIR -94 114 4 264 77 0 0 chr5 7621174 7621213 -192008937 + (TC)n Simple_repeat Simple_repeat 1 39 0 1655 172 14 24 chr5 7621878 7622175 -192007975 + AluJb SINE Alu 5 298 -14 220 325 73 24 chr5 7622181 7622304 -192007846 - MIR SINE MIR -74 188 60 2088 63 35 3 chr5 7622771 7623056 -192007094 + L1PA10 LINE L1 5731 6024 -144 1742 122 0 0 chr5 7623162 7623417 -192006733 + L1PA13 LINE L1 5907 6161 -2 471 236 0 0 chr5 7623690 7623779 -192006371 + MER58A DNA MER1_type 1 89 -18 2165 134 7 0 chr5 7624230 7624537 -192005613 + AluSx SINE Alu 1 309 -3 628 270 23 0 chr5 7625529 7625703 -192004447 - MER5B DNA MER1_type 0 178 1 267 263 18 35 chr5 7625905 7626019 -192004131 - MIR SINE MIR -100 162 51 2286 110 3 0 chr5 7628640 7628950 -192001200 + AluSx SINE Alu 1 311 -1 1929 142 33 0 chr5 7630684 7630986 -191999164 - AluJo SINE Alu 0 312 1 702 252 121 114 chr5 7631620 7632211 -191997939 + MLT1F1 LTR MaLR 1 567 0 21 0 0 0 chr5 7632268 7632289 -191997861 + AT_rich Low_complexity Low_complexity 1 21 0 337 247 41 14 chr5 7632290 7632363 -191997787 + MER21B LTR ERV1 15 89 -774 2895 243 110 8 chr5 7632385 7633151 -191996999 + MER21B LTR ERV1 19 862 -1 425 222 23 123 chr5 7634788 7634959 -191995191 - MIR SINE MIR -81 181 28 237 163 0 0 chr5 7635194 7635237 -191994913 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 573 257 44 79 chr5 7635686 7636001 -191994149 + L2 LINE L2 2979 3282 -31 378 240 163 78 chr5 7636039 7636130 -191994020 + HAL1 LINE L1 1010 1092 -1415 2124 121 0 0 chr5 7636130 7636412 -191993738 + AluSx SINE Alu 1 282 -30 378 240 163 78 chr5 7636412 7636578 -191993572 + HAL1 LINE L1 1092 1289 -1218 617 249 92 18 chr5 7636619 7636848 -191993302 + LTR33 LTR ERVL 4 249 -272 243 219 16 31 chr5 7637209 7637273 -191992877 + LTR33 LTR ERVL 456 518 -3 365 273 74 34 chr5 7637285 7637461 -191992689 + HAL1 LINE L1 1336 1518 -989 379 223 96 0 chr5 7638413 7638507 -191991643 + MER58 DNA MER1_type 1 103 -112 838 292 81 26 chr5 7638642 7639063 -191991087 + MLT1J2 LTR MaLR 4 447 -3 1186 55 0 0 chr5 7639981 7640127 -191990023 - L1P LINE L1 -5999 147 2 225 0 0 0 chr5 7640752 7640777 -191989373 + (TG)n Simple_repeat Simple_repeat 2 26 0 1888 208 78 8 chr5 7641177 7641545 -191988605 + L1M4 LINE L1 4917 5346 -838 1915 61 15 8 chr5 7641545 7641806 -191988344 + L1PA13 LINE L1 5901 6163 0 1888 208 78 8 chr5 7641806 7642049 -191988101 + L1M4 LINE L1 5346 5570 -614 399 264 15 1 chr5 7642110 7642222 -191987928 + L1M4 LINE L1 5517 5626 -558 25 31 0 0 chr5 7642246 7642278 -191987872 + AT_rich Low_complexity Low_complexity 1 32 0 981 125 7 0 chr5 7642357 7642509 -191987641 + L1M4 LINE L1 5637 5789 -395 317 49 0 0 chr5 7642610 7642651 -191987499 + L1PA3 LINE L1 6112 6152 -3 2606 131 5 0 chr5 7643999 7644372 -191985778 + THE1C LTR MaLR 1 375 0 28 48 0 0 chr5 7645115 7645157 -191984993 + AT_rich Low_complexity Low_complexity 1 42 0 341 301 52 0 chr5 7646913 7647049 -191983101 + MIR SINE MIR 108 250 -12 10144 74 7 37 chr5 7648626 7650550 -191979600 - L1PA7 LINE L1 0 6154 4295 2320 104 0 0 chr5 7650550 7650847 -191979303 - AluSc SINE Alu -12 297 1 10144 74 7 37 chr5 7650847 7651197 -191978953 - L1PA7 LINE L1 -1859 4295 3936 234 352 122 13 chr5 7652461 7652691 -191977459 + L2 LINE L2 2812 3066 -206 630 95 0 78 chr5 7652947 7653082 -191977068 + AluY SINE Alu 197 311 0 198 143 0 0 chr5 7653229 7653264 -191976886 + (TCC)n Simple_repeat Simple_repeat 3 37 0 433 316 7 20 chr5 7653932 7654084 -191976066 + MIR SINE MIR 16 165 -97 527 203 0 0 chr5 7654382 7654515 -191975635 - MER96B DNA MER1_type? -241 176 44 308 211 39 19 chr5 7654539 7654643 -191975507 + MIR SINE MIR 155 260 -2 721 306 83 23 chr5 7656411 7656806 -191973344 + L2 LINE L2 2888 3306 -7 29 70 0 0 chr5 7657116 7657173 -191972977 + AT_rich Low_complexity Low_complexity 1 57 0 394 279 39 26 chr5 7658533 7658687 -191971463 + MIR SINE MIR 34 189 -73 31 58 0 0 chr5 7660897 7660949 -191969201 + AT_rich Low_complexity Low_complexity 1 52 0 225 260 58 29 chr5 7661180 7661284 -191968866 - L1MC/D LINE L1 -1940 5868 5762 1227 212 48 79 chr5 7661294 7661624 -191968526 - MLT1F LTR MaLR -20 522 203 986 194 55 27 chr5 7711639 7711968 -191918182 + L1MC2 LINE L1 4979 5316 -830 * 5083 166 19 22 chr5 7711963 7713154 -191916996 - L1PA16 LINE L1 -12 6154 4975 2839 201 24 39 chr5 7713156 7713826 -191916324 + L1MC2 LINE L1 5304 5963 -381 565 194 46 0 chr5 7714331 7714439 -191915711 + L1PA15 LINE L1 6051 6163 -2 1071 216 26 45 chr5 7714445 7714709 -191915441 - MLT1A1 LTR MaLR -106 259 1 2673 253 73 63 chr5 7714730 7715494 -191914656 + MLT-int LTR MaLR 171 948 -787 2727 175 26 72 chr5 7715494 7716135 -191914015 - LTR9 LTR ERV1 0 612 1 2673 253 73 63 chr5 7716135 7716295 -191913855 + MLT-int LTR MaLR 948 1105 -630 2070 195 48 66 chr5 7716262 7716745 -191913405 + MLT1A1-int LTR MaLR 1254 1727 -8 * 1918 159 21 40 chr5 7716752 7717124 -191913026 + MLT1A1 LTR MaLR 1 365 0 242 271 51 25 chr5 7718857 7718975 -191911175 - MIR SINE MIR -72 136 16 879 147 70 0 chr5 7719633 7719790 -191910360 + MLT1C LTR MaLR 1 168 -299 228 170 0 19 chr5 7719798 7719851 -191910299 + T-rich Low_complexity Low_complexity 5 56 0 2212 108 3 0 chr5 7719860 7720157 -191909993 - AluSx SINE Alu -10 302 5 912 214 146 11 chr5 7720163 7720438 -191909712 + MLT1C LTR MaLR 156 467 0 222 330 102 8 chr5 7724304 7724422 -191905728 - MIR SINE MIR -63 145 17 1452 224 43 19 chr5 7725062 7725478 -191904672 - MLT1C LTR MaLR -41 426 1 521 300 77 13 chr5 7726324 7726557 -191903593 + MIR SINE MIR 14 261 -1 1666 156 33 77 chr5 7726566 7726937 -191903213 + MER93b LTR ERV1 1 356 -17 1968 134 13 29 chr5 7726937 7727244 -191902906 - AluSx SINE Alu -10 302 1 1666 156 33 77 chr5 7727244 7727262 -191902888 + MER93b LTR ERV1 356 373 0 23 0 0 0 chr5 7728075 7728098 -191902052 + AT_rich Low_complexity Low_complexity 1 23 0 1054 231 43 61 chr5 7728318 7728694 -191901456 - MLT1A2 LTR MaLR -4 370 2 21 0 0 0 chr5 7728743 7728764 -191901386 + AT_rich Low_complexity Low_complexity 1 21 0 2141 126 0 0 chr5 7729195 7729488 -191900662 + AluSx SINE Alu 6 298 -14 324 179 45 0 chr5 7731251 7731318 -191898832 - MLT2D LTR ERVL 0 520 451 1787 196 32 27 chr5 7731390 7731762 -191898388 - MLT2D LTR ERVL -40 374 1 195 107 0 0 chr5 7734476 7734504 -191895646 + MIR SINE MIR 17 44 -218 * 317 153 56 14 chr5 7734502 7734574 -191895576 - MIR SINE MIR -90 172 98 1449 208 83 38 chr5 7734719 7735162 -191894988 - MLT1C LTR MaLR 0 467 5 392 118 15 0 chr5 7735545 7735613 -191894537 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 283 161 345 0 chr5 7735689 7735776 -191894374 + L2 LINE L2 3193 3309 -4 441 50 0 0 chr5 7735845 7735905 -191894245 + (CA)n Simple_repeat Simple_repeat 1 60 0 1422 186 54 11 chr5 7736429 7736708 -191893442 + MER2 DNA MER2_type 48 338 -7 334 271 36 7 chr5 7736746 7736886 -191893264 - L2 LINE L2 -805 2509 2366 530 279 123 6 chr5 7737210 7737526 -191892624 - L2 LINE L2 -889 2425 2073 231 313 106 28 chr5 7737571 7737642 -191892508 - L2 LINE L2 -1533 1781 1717 2200 115 0 16 chr5 7737642 7737956 -191892194 - AluSx SINE Alu -3 309 1 231 313 106 28 chr5 7737956 7738101 -191892049 - L2 LINE L2 -1597 1717 1548 240 290 20 60 chr5 7738738 7738838 -191891312 + MIR SINE MIR 40 135 -73 1509 93 29 0 chr5 7738881 7739086 -191891064 - AluSc SINE Alu -6 303 93 1830 157 10 3 chr5 7739835 7740140 -191890010 + AluSx SINE Alu 5 311 -1 430 265 54 20 chr5 7740162 7740309 -191889841 - LTR33 LTR ERVL -54 467 316 958 161 7 13 chr5 7741353 7741508 -191888642 - AluSq SINE Alu -159 154 1 2650 216 112 111 chr5 7741519 7741547 -191888603 - Zaphod DNA AcHobo -1692 2339 2313 1818 107 122 0 chr5 7741547 7741810 -191888340 - AluSq SINE Alu -18 295 1 2650 216 112 111 chr5 7741810 7743197 -191886953 - Zaphod DNA AcHobo -1718 2313 928 1716 122 122 0 chr5 7743197 7743459 -191886691 + AluSq SINE Alu 1 294 -19 2650 216 112 111 chr5 7743459 7743498 -191886652 - Zaphod DNA AcHobo -3103 928 891 2044 134 10 7 chr5 7743498 7743790 -191886360 + AluSq SINE Alu 1 293 -20 2650 216 112 111 chr5 7743790 7744035 -191886115 - Zaphod DNA AcHobo -3140 891 637 552 254 18 47 chr5 7744157 7744326 -191885824 - Zaphod DNA AcHobo -3795 236 73 268 325 41 6 chr5 7744482 7744651 -191885499 + L1ME3A LINE L1 5749 5923 -247 255 273 27 82 chr5 7744763 7744946 -191885204 + L1ME3A LINE L1 5989 6161 -9 2015 138 7 0 chr5 7745072 7745363 -191884787 + AluY SINE Alu 1 293 -18 2031 187 52 29 chr5 7745479 7745960 -191884190 - LTR22B LTR ERVK 0 492 1 197 275 7 22 chr5 7747828 7747897 -191882253 + GA-rich Low_complexity Low_complexity 1 69 -67 1694 193 19 43 chr5 7747897 7748271 -191881879 - MLT1A1 LTR MaLR 0 365 1 197 275 7 22 chr5 7748271 7748339 -191881811 + GA-rich Low_complexity Low_complexity 69 136 0 24 0 0 0 chr5 7748493 7748517 -191881633 + AT_rich Low_complexity Low_complexity 1 24 0 693 249 98 10 chr5 7748765 7749070 -191881080 - L1M4 LINE L1 -1484 4662 4331 284 161 148 37 chr5 7752403 7752484 -191877666 + MLT1C LTR MaLR 3 92 -375 1293 194 127 12 chr5 7752611 7752957 -191877193 + MLT1C LTR MaLR 82 467 0 414 0 0 0 chr5 7754609 7754655 -191875495 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 180 111 0 0 chr5 7754656 7754683 -191875467 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 539 41 27 0 chr5 7755383 7755456 -191874694 + (GAAAA)n Simple_repeat Simple_repeat 2 76 0 286 298 43 43 chr5 7755522 7755683 -191874467 + L3 LINE CR1 1293 1453 -124 472 154 82 27 chr5 7756215 7756325 -191873825 + MER95 LTR ERV 316 431 0 232 318 57 0 chr5 7756482 7756570 -191873580 + MIR SINE MIR 97 189 -73 180 0 0 0 chr5 7756855 7756875 -191873275 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 237 186 0 0 chr5 7756875 7756918 -191873232 + L1M4 LINE L1 5164 5206 -940 5495 175 31 32 chr5 7757255 7758206 -191871944 - L1MC1 LINE L1 0 6333 5379 2176 104 21 0 chr5 7758206 7758494 -191871656 - AluSx SINE Alu -18 294 1 5495 175 31 32 chr5 7758494 7758714 -191871436 - L1MC1 LINE L1 -954 5379 5160 1642 152 4 0 chr5 7760148 7760411 -191869739 - L1MA8 LINE L1 -392 5899 5636 836 166 31 6 chr5 7760410 7760573 -191869577 + L1MA6 LINE L1 5937 6103 -197 * 290 192 0 0 chr5 7760629 7760681 -191869469 + L1MA8 LINE L1 6217 6268 -23 535 299 99 5 chr5 7762081 7762292 -191867858 + MIR SINE MIR 25 255 -7 383 233 39 10 chr5 7762544 7762647 -191867503 - MLT1J LTR MaLR -303 208 103 272 200 12 0 chr5 7764644 7764724 -191865426 + GA-rich Low_complexity Low_complexity 3 83 0 2428 130 11 3 chr5 7766333 7766694 -191863456 + THE1B LTR MaLR 1 364 0 552 265 163 30 chr5 7766718 7767050 -191863100 + L2 LINE L2 2369 2744 -570 218 335 47 43 chr5 7767162 7767440 -191862710 + L2 LINE L2 2231 2509 -805 209 330 35 52 chr5 7767545 7767660 -191862490 + L2 LINE L2 3117 3229 -43 240 278 28 0 chr5 7768831 7768903 -191861247 + (CA)n Simple_repeat Simple_repeat 1 74 0 339 177 46 0 chr5 7768928 7769058 -191861092 + (CA)n Simple_repeat Simple_repeat 2 137 0 356 309 15 7 chr5 7769233 7769369 -191860781 - MER5A DNA MER1_type -3 186 50 423 56 42 0 chr5 7769852 7769923 -191860227 + (CACAA)n Simple_repeat Simple_repeat 1 74 0 2071 178 35 0 chr5 7770078 7770455 -191859695 - MLT1B LTR MaLR 0 390 1 207 0 0 0 chr5 7770838 7770861 -191859289 + (A)n Simple_repeat Simple_repeat 1 23 0 258 271 94 12 chr5 7771270 7771355 -191858795 + L1ME LINE L1 5482 5573 -548 2606 193 14 60 chr5 7771601 7772181 -191857969 + MER68 LTR ERV1 2 554 -8 2025 170 29 24 chr5 7772335 7772488 -191857662 + MSTA LTR MaLR 45 196 -232 2073 126 7 10 chr5 7772488 7772790 -191857360 + AluSx SINE Alu 1 301 -11 2025 170 29 24 chr5 7772790 7772921 -191857229 + MSTA LTR MaLR 196 334 -94 2696 108 11 0 chr5 7772921 7773292 -191856858 + THE1C LTR MaLR 1 375 0 2025 170 29 24 chr5 7773292 7773388 -191856762 + MSTA LTR MaLR 334 428 0 195 303 156 9 chr5 7774102 7774211 -191855939 - L2 LINE L2 -10 3303 3179 1429 279 33 4 chr5 7774572 7775023 -191855127 + LTR16B LTR ERVL 1 464 0 361 272 148 0 chr5 7775918 7776080 -191854070 - MIR SINE MIR -64 198 13 971 241 65 32 chr5 7777987 7778356 -191851794 + LTR37A LTR ERV1 39 419 -7 216 0 0 0 chr5 7778395 7778419 -191851731 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3548 139 55 3 chr5 7779860 7780428 -191849722 - MER50 LTR ERV1 -23 711 115 414 294 85 28 chr5 7780399 7780610 -191849540 - MER112 DNA MER1_type -21 239 17 * 878 269 137 28 chr5 7780732 7780842 -191849308 + LTR16A LTR ERVL 11 108 -342 2675 91 8 0 chr5 7780842 7781194 -191848956 + THE1A LTR MaLR 1 355 0 878 269 137 28 chr5 7781194 7781477 -191848673 + LTR16A LTR ERVL 108 447 -3 184 121 61 0 chr5 7782537 7782570 -191847580 - L3b LINE CR1 -113 1470 1436 1932 265 34 27 chr5 7784025 7784649 -191845501 + MLT1E3 LTR MaLR 5 620 -4 28 61 0 0 chr5 7784700 7784749 -191845401 + AT_rich Low_complexity Low_complexity 1 49 0 377 223 158 7 chr5 7784813 7784952 -191845198 - LTR33 LTR ERVL -69 452 293 1415 170 30 102 chr5 7786576 7786970 -191843180 + L1MD3 LINE L1 6804 7169 -826 2401 112 0 0 chr5 7786971 7787283 -191842867 + AluSx SINE Alu 1 312 0 795 231 36 12 chr5 7787283 7787530 -191842620 + L1 LINE L1 3776 4028 -2118 260 150 0 0 chr5 7787615 7787655 -191842495 + Alu SINE Alu 251 290 -10 315 300 0 0 chr5 7787674 7787764 -191842386 - L1MC4 LINE L1 -1339 6703 6614 2107 231 28 36 chr5 7787764 7788424 -191841726 + L1MD3 LINE L1 7108 7948 -34 189 0 0 0 chr5 7789925 7789946 -191840204 + (A)n Simple_repeat Simple_repeat 1 21 0 300 349 88 51 chr5 7792081 7792849 -191837301 + L1MEd LINE L1 48 844 -5275 2948 6 0 0 chr5 7793603 7793914 -191836236 - AluYa5 SINE Alu 0 311 1 235 308 19 28 chr5 7793945 7794052 -191836098 + MIR SINE MIR 97 202 -60 1797 71 0 8 chr5 7794081 7794320 -191835830 - L1PA6 LINE L1 -212 5942 5706 303 143 0 0 chr5 7794299 7794348 -191835802 + L1PA12 LINE L1 6120 6168 0 * 234 128 0 0 chr5 7794512 7794551 -191835599 + (CA)n Simple_repeat Simple_repeat 2 40 0 521 256 32 78 chr5 7794609 7794953 -191835197 + L1MEd LINE L1 908 1235 -4884 476 186 8 0 chr5 7795627 7795745 -191834405 + GA-rich Low_complexity Low_complexity 2 120 0 766 295 48 63 chr5 7795842 7796255 -191833895 + L1MCb LINE L1 1 407 -5638 1413 203 52 0 chr5 7796267 7796538 -191833612 + L1PB4 LINE L1 5869 6153 -3 3982 236 67 32 chr5 7796712 7799393 -191830757 + L1MCb LINE L1 569 3406 -3158 2628 177 107 169 chr5 7799554 7800005 -191830145 + L1MC3 LINE L1 6739 7216 -569 403 228 54 0 chr5 7800005 7800097 -191830053 + MLT1C LTR MaLR 35 131 -436 2628 177 107 169 chr5 7800097 7800668 -191829482 + L1MC3 LINE L1 7216 7783 -2 1866 121 0 4 chr5 7800733 7800990 -191829160 - AluSg SINE Alu -13 297 42 712 218 155 35 chr5 7800990 7801296 -191828854 - Zaphod DNA AcHobo -756 3275 2928 1282 246 53 40 chr5 7801416 7801499 -191828651 - Zaphod DNA AcHobo -1529 2502 2422 957 163 0 27 chr5 7801499 7801683 -191828467 - L1MA9 LINE L1 0 6312 6134 1282 246 53 40 chr5 7801683 7801791 -191828359 - Zaphod DNA AcHobo -1609 2422 2317 2478 91 0 0 chr5 7801791 7802100 -191828050 - AluY SINE Alu -2 309 1 1282 246 53 40 chr5 7802100 7802412 -191827738 - Zaphod DNA AcHobo -1714 2317 1991 234 233 33 0 chr5 7802462 7802522 -191827628 - Zaphod DNA AcHobo -2049 1982 1921 232 295 98 8 chr5 7802652 7802774 -191827376 - MIR SINE MIR -4 258 126 493 193 283 0 chr5 7803289 7803434 -191826716 - MER53 DNA DNA 0 189 4 261 0 0 0 chr5 7803692 7803721 -191826429 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 2040 189 23 25 chr5 7803747 7804180 -191825970 + Tigger2a DNA MER2_type 3 434 0 1037 189 99 128 chr5 7804259 7804541 -191825609 + MLT1C LTR MaLR 37 303 -164 2041 107 0 4 chr5 7804541 7804811 -191825339 + AluSq SINE Alu 1 269 -44 1037 189 99 128 chr5 7804811 7804972 -191825178 + MLT1C LTR MaLR 303 467 0 478 209 55 0 chr5 7806093 7806203 -191823947 - L1MA9 LINE L1 -385 5927 5812 796 154 83 6 chr5 7806204 7806233 -191823917 + L1MA9 LINE L1 6122 6147 -165 324 0 0 0 chr5 7806233 7806269 -191823881 + (CA)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr5 7806268 7806289 -191823861 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 796 154 83 6 chr5 7806269 7806428 -191823722 + L1MA9 LINE L1 6147 6303 -9 811 272 27 5 chr5 7807972 7808196 -191821954 + MLT1C LTR MaLR 239 467 0 270 179 0 0 chr5 7810560 7810616 -191819534 + GA-rich Low_complexity Low_complexity 3 58 0 2314 107 3 3 chr5 7811917 7812226 -191817924 + AluSx SINE Alu 1 309 -3 1682 174 102 6 chr5 7812272 7812605 -191817545 + MLT1A1 LTR MaLR 1 365 0 251 228 0 0 chr5 7813745 7813802 -191816348 + T-rich Low_complexity Low_complexity 1 57 0 1133 224 82 55 chr5 7814205 7814585 -191815565 - MLT1B LTR MaLR 0 390 1 23 0 0 0 chr5 7817582 7817605 -191812545 + AT_rich Low_complexity Low_complexity 1 23 0 253 277 229 5 chr5 7817696 7817884 -191812266 + L1MC/D LINE L1 5574 5803 -2005 319 351 11 0 chr5 7818169 7818263 -191811887 + MIR SINE MIR 158 252 -10 2068 105 3 20 chr5 7818369 7818664 -191811486 + AluSx SINE Alu 9 298 -14 216 0 0 0 chr5 7822182 7822206 -191807944 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 867 246 65 35 chr5 7822245 7822615 -191807535 - LTR37A LTR ERV1 -7 419 39 201 267 19 95 chr5 7823003 7823108 -191807042 + MIR3 SINE MIR 74 170 -38 477 278 237 0 chr5 7824535 7824729 -191805421 + MIR SINE MIR 13 252 -10 752 276 24 42 chr5 7825825 7826158 -191803992 - LTR16B LTR ERVL -137 327 1 188 238 64 87 chr5 7827432 7827604 -191802546 + MER5C DNA MER1_type 21 188 -136 1962 109 0 4 chr5 7828775 7829042 -191801108 + AluSx SINE Alu 1 266 -46 273 214 135 11 chr5 7829799 7829888 -191800262 + LTR16C LTR ERVL 389 488 -3 1968 139 121 67 chr5 7830239 7830643 -191799507 + MSTA LTR MaLR 3 428 0 9230 154 22 54 chr5 7830643 7832348 -191797802 + MSTA-int LTR MaLR 1 1651 0 1898 177 138 5 chr5 7832348 7832726 -191797424 + MSTA LTR MaLR 1 428 0 1545 178 3 51 chr5 7832810 7833130 -191797020 - AluJo SINE Alu 0 312 7 473 124 16 141 chr5 7834195 7834316 -191795834 + MER20 DNA MER1_type 109 214 -5 360 217 179 0 chr5 7834396 7834502 -191795648 + LTR40a LTR ERVL 395 519 0 532 231 75 0 chr5 7835471 7835605 -191794545 + MER58B DNA MER1_type 197 340 -1 338 151 87 3 chr5 7836910 7837004 -191793146 - MLT1G LTR MaLR -393 156 13 256 306 0 14 chr5 7837684 7837756 -191792394 + L2 LINE L2 3200 3270 -2 268 353 0 0 chr5 7838094 7838210 -191791940 + (CA)n Simple_repeat Simple_repeat 1 116 0 264 59 0 0 chr5 7838227 7838261 -191791889 + (CA)n Simple_repeat Simple_repeat 2 35 0 259 253 40 80 chr5 7838733 7838833 -191791317 - Charlie4 DNA MER1_type 0 1961 1867 2334 102 0 3 chr5 7838833 7839136 -191791014 + AluSx SINE Alu 1 302 -10 259 253 40 80 chr5 7839136 7839185 -191790965 - Charlie4 DNA MER1_type -94 1867 1818 286 330 134 0 chr5 7840373 7840567 -191789583 - MIR SINE MIR -21 241 22 1138 248 42 45 chr5 7840732 7841179 -191788971 + MLT1D LTR MaLR 1 446 -59 1827 186 0 3 chr5 7841183 7841484 -191788666 + AluJb SINE Alu 6 305 -7 306 145 126 58 chr5 7841697 7841811 -191788339 - MER34 LTR ERV1 -6 536 433 327 315 12 85 chr5 7841868 7842214 -191787936 + MLT1I LTR MaLR 98 392 -17 224 320 70 0 chr5 7842230 7842330 -191787820 - L2 LINE L2 -862 2452 2346 326 275 167 0 chr5 7842886 7843006 -191787144 - L1ME4a LINE L1 -207 5914 5775 2040 142 7 3 chr5 7843015 7843324 -191786826 - AluSg SINE Alu 0 310 1 826 78 93 16 chr5 7843460 7843589 -191786561 + MER85 DNA T2_type 1 139 0 471 188 6 0 chr5 7845157 7845250 -191784900 + Tigger4(Zombi) DNA MER2_type 1 97 -2634 477 241 85 51 chr5 7846331 7846528 -191783622 + MIR SINE MIR 15 223 -39 255 61 0 0 chr5 7847746 7847779 -191782371 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 326 195 13 0 chr5 7847787 7847864 -191782286 + GA-rich Low_complexity Low_complexity 1 78 0 182 289 41 66 chr5 7848154 7848275 -191781875 + L2 LINE L2 2382 2499 -815 254 86 0 0 chr5 7848891 7848926 -191781224 - 5S rRNA rRNA -25 96 62 472 111 0 0 chr5 7848926 7848989 -191781161 + AluSc SINE Alu 155 217 -92 1190 229 28 76 chr5 7849441 7849912 -191780238 - MLT1C LTR MaLR -17 450 3 282 269 141 60 chr5 7850347 7850496 -191779654 + MIR3 SINE MIR 33 193 -15 1496 290 100 24 chr5 7853352 7854397 -191775753 + L1ME3A LINE L1 4964 6142 -28 633 248 135 66 chr5 7854398 7854788 -191775362 + MLT1D LTR MaLR 1 408 -59 590 119 0 12 chr5 7854791 7854875 -191775275 + AluS SINE Alu 2 84 -229 237 239 0 14 chr5 7854876 7854947 -191775203 + MLT1B LTR MaLR 321 390 0 219 210 43 70 chr5 7854984 7855056 -191775094 + MER5B DNA MER1_type 61 122 -56 383 360 77 31 chr5 7855211 7855731 -191774419 - L2 LINE L2 -2047 1267 724 1712 188 58 80 chr5 7857152 7857668 -191772482 - MLT1D LTR MaLR 0 505 1 4816 113 39 95 chr5 7858122 7859124 -191771026 + Tigger3b DNA MER2_type 2 947 -284 554 77 0 0 chr5 7859125 7859203 -191770947 - L1PA8 LINE L1 -1 6171 6094 1381 45 6 0 chr5 7859203 7859379 -191770771 + L1PA8A LINE L1 5689 5865 -266 1450 191 50 0 chr5 7859379 7859657 -191770493 + Tigger3b DNA MER2_type 940 1231 0 309 190 88 36 chr5 7862195 7862332 -191767818 + (TCTCTG)n Simple_repeat Simple_repeat 6 149 0 599 227 52 101 chr5 7862391 7862717 -191767433 + MLT1J LTR MaLR 138 447 -64 1144 252 61 48 chr5 7864504 7864895 -191765255 - MLT1C LTR MaLR 0 467 83 7311 18 0 0 chr5 7864895 7865717 -191764433 + L1PA3 LINE L1 5318 6139 -16 308 28 0 0 chr5 7865681 7865717 -191764433 + L1PA2 LINE L1 6104 6191 0 315 58 39 0 chr5 7865717 7865769 -191764381 + (TAAA)n Simple_repeat Simple_repeat 3 180 0 1144 252 61 48 chr5 7865769 7865832 -191764318 - MLT1C LTR MaLR -383 84 6 315 0 0 0 chr5 7865904 7865939 -191764211 + (CA)n Simple_repeat Simple_repeat 2 36 0 321 389 65 44 chr5 7868085 7868378 -191761772 - L2 LINE L2 -2 3270 2972 221 333 151 34 chr5 7868510 7868861 -191761289 - L2 LINE L2 -831 2483 2092 184 338 38 0 chr5 7868882 7868962 -191761188 - MER5A DNA MER1_type -100 89 7 246 285 58 44 chr5 7869050 7869187 -191760963 - L1MC/D LINE L1 -1959 5849 5711 1755 153 6 32 chr5 7869311 7869624 -191760526 + AluJo SINE Alu 3 307 -5 321 248 341 0 chr5 7870360 7870489 -191759661 + MIR SINE MIR 60 232 -30 1579 205 39 55 chr5 7872231 7872616 -191757534 + MLT1B LTR MaLR 1 379 -11 218 317 81 32 chr5 7872632 7872755 -191757395 - MER5A DNA MER1_type -26 163 35 226 284 63 0 chr5 7872801 7872896 -191757254 + MER5A DNA MER1_type 9 109 -80 270 309 90 71 chr5 7874519 7874930 -191755220 - L2 LINE L2 -24 3248 2830 200 265 193 12 chr5 7877668 7877751 -191752399 + MIR SINE MIR 50 147 -115 410 201 72 86 chr5 7878185 7878324 -191751826 + L2 LINE L2 3153 3289 -24 517 109 42 30 chr5 7879150 7879417 -191750733 + (CA)n Simple_repeat Simple_repeat 1 270 0 214 196 36 89 chr5 7881308 7881364 -191748786 + MIR3 SINE MIR 136 188 -20 2069 113 20 0 chr5 7881521 7881813 -191748337 + AluSx SINE Alu 1 298 -14 209 224 0 17 chr5 7882042 7882100 -191748050 + A-rich Low_complexity Low_complexity 4 60 0 2029 162 31 0 chr5 7882129 7882487 -191747663 + L1M2 LINE L1 5280 5648 -643 1890 135 3 33 chr5 7882488 7882844 -191747306 - MER4A LTR ERV1 0 664 261 629 101 10 20 chr5 7882844 7882943 -191747207 - MER4A LTR ERV1 -566 98 1 291 119 0 0 chr5 7882943 7882985 -191747165 + L1M2 LINE L1 5646 5687 -604 3542 109 35 7 chr5 7882985 7883524 -191746626 - MER41A LTR ERV1 0 554 1 298 62 0 0 chr5 7883526 7883574 -191746576 + L1MA7 LINE L1 6244 6291 0 233 29 0 29 chr5 7883676 7883711 -191746439 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 685 319 91 45 chr5 7884035 7884593 -191745557 + L1M4 LINE L1 2311 2894 -3252 434 213 0 21 chr5 7884624 7884718 -191745432 - MER94 DNA DNA -42 92 1 463 280 118 40 chr5 7885001 7885526 -191744624 + L1M4 LINE L1 3196 3761 -2385 680 252 19 0 chr5 7885540 7885699 -191744451 - MLT1G1 LTR MaLR -5 590 429 562 254 157 14 chr5 7885728 7886006 -191744144 - MLT1G1 LTR MaLR -251 344 27 1765 124 58 19 chr5 7886006 7886531 -191743619 - MER4A LTR ERV1 -1 663 1 502 272 37 88 chr5 7886583 7886755 -191743395 + L1M4 LINE L1 3791 3945 -2201 2097 95 3 0 chr5 7886755 7887033 -191743117 + AluSc SINE Alu 1 282 -27 189 94 0 0 chr5 7887033 7887065 -191743085 + (TTAAA)n Simple_repeat Simple_repeat 4 35 0 502 272 37 88 chr5 7887071 7887170 -191742980 + L1M4 LINE L1 3945 4048 -2098 1274 221 39 13 chr5 7887223 7887531 -191742619 - MLT1C LTR MaLR -151 316 1 2300 85 0 3 chr5 7887763 7888068 -191742082 + AluSc SINE Alu 1 304 -5 315 150 0 0 chr5 7888670 7888730 -191741420 + (ATG)n Simple_repeat Simple_repeat 3 62 0 212 0 36 0 chr5 7889260 7889288 -191740862 + (TTG)n Simple_repeat Simple_repeat 2 30 0 823 269 83 74 chr5 7889909 7890366 -191739784 - LTR16B LTR ERVL -3 461 1 351 0 0 0 chr5 7890384 7890423 -191739727 + (ATG)n Simple_repeat Simple_repeat 1 39 0 322 303 79 20 chr5 7890424 7890576 -191739574 - MIR SINE MIR -12 250 90 2703 3 0 13 chr5 7890822 7891134 -191739016 + AluYa5 SINE Alu 1 308 -3 2271 179 33 0 chr5 7891322 7891710 -191738440 + LTR39 LTR ERV1 1 401 -382 365 98 43 174 chr5 7891710 7891802 -191738348 + MADE1 DNA Mariner 1 80 0 1608 240 49 3 chr5 7891802 7892169 -191737981 + LTR39 LTR ERV1 400 783 0 182 348 0 0 chr5 7892218 7892264 -191737886 + L2 LINE L2 3210 3255 -17 2404 118 24 21 chr5 7893059 7893433 -191736717 + THE1C LTR MaLR 1 375 0 719 187 99 33 chr5 7893598 7893780 -191736370 + MER3 DNA MER1_type 11 204 -5 824 265 28 14 chr5 7893941 7894156 -191735994 + MIR SINE MIR 1 218 -44 203 246 271 16 chr5 7894388 7894510 -191735640 + L2 LINE L2 3117 3269 -3 1677 191 34 96 chr5 7894797 7895182 -191734968 - MLT1D LTR MaLR -6 499 154 1695 167 141 26 chr5 7895182 7895566 -191734584 + MSTA LTR MaLR 1 428 0 1677 191 34 96 chr5 7895566 7895710 -191734440 - MLT1D LTR MaLR -351 154 3 230 220 40 0 chr5 7896798 7896848 -191733302 - MLT1I LTR MaLR -130 279 228 483 260 68 56 chr5 7897749 7897918 -191732232 + MER46C DNA MER2_type 81 255 -83 1955 164 72 18 chr5 7897918 7898307 -191731843 - MLT2D LTR ERVL -4 410 1 483 260 68 56 chr5 7898307 7898387 -191731763 + MER46C DNA MER2_type 255 333 -5 334 263 91 0 chr5 7899176 7899275 -191730875 - MIR SINE MIR -69 193 86 997 238 124 46 chr5 7899438 7899850 -191730300 + MLT1C LTR MaLR 22 465 -2 279 239 57 34 chr5 7900581 7900669 -191729481 + MLT1I LTR MaLR 190 279 -130 186 189 0 0 chr5 7900967 7901004 -191729146 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 274 196 0 0 chr5 7901012 7901068 -191729082 - L1MC4 LINE L1 -1339 6703 6648 231 257 0 0 chr5 7901880 7901981 -191728169 + (TG)n Simple_repeat Simple_repeat 2 102 0 304 342 40 27 chr5 7902478 7902700 -191727450 - HAL1 LINE L1 -37 2470 2246 1102 308 139 35 chr5 7902906 7904175 -191725975 - HAL1 LINE L1 -354 2153 753 345 259 22 45 chr5 7904834 7904956 -191725194 - MIR3 SINE MIR -21 187 66 1258 232 30 46 chr5 7904994 7905364 -191724786 - MLT1A1 LTR MaLR -1 364 1 320 331 79 16 chr5 7905721 7905848 -191724302 - MIR3 SINE MIR -8 200 66 869 148 49 12 chr5 7906488 7906650 -191723500 + FRAM SINE Alu 1 165 -11 1968 114 3 20 chr5 7906713 7907011 -191723139 - AluSx SINE Alu -19 293 1 261 327 26 9 chr5 7907422 7907535 -191722615 + MIR3 SINE MIR 90 204 -4 213 20 0 102 chr5 7907615 7907664 -191722486 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 320 193 0 60 chr5 7910222 7910305 -191719845 + MLT1F1 LTR MaLR 55 132 -435 1937 206 63 20 chr5 7910305 7910611 -191719539 + L1MD3 LINE L1 7416 7752 -243 1305 199 15 103 chr5 7910611 7911009 -191719141 + MLT1A1 LTR MaLR 1 363 -2 1937 206 63 20 chr5 7911009 7911191 -191718959 + L1MD3 LINE L1 7752 7925 -70 378 162 0 0 chr5 7911275 7911343 -191718807 + L1MD3 LINE L1 7928 7995 0 185 195 0 24 chr5 7911925 7911966 -191718184 - L2 LINE L2 -3147 167 128 676 228 17 6 chr5 7913069 7913249 -191716901 + MER5A DNA MER1_type 4 185 -4 390 312 40 40 chr5 7913287 7913460 -191716690 - MER5B DNA MER1_type -5 173 1 256 267 95 95 chr5 7914292 7914513 -191715637 + L2 LINE L2 3014 3234 -38 21 0 0 0 chr5 7915141 7915162 -191714988 + AT_rich Low_complexity Low_complexity 1 21 0 866 264 47 12 chr5 7915176 7915520 -191714630 - L1MC4 LINE L1 0 8042 7687 21 0 0 0 chr5 7915548 7915569 -191714581 + AT_rich Low_complexity Low_complexity 1 21 0 1261 159 25 107 chr5 7915577 7915904 -191714246 - AluYb8 SINE Alu -18 300 1 192 135 0 0 chr5 7916073 7916110 -191714040 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 200 282 55 55 chr5 7916422 7916532 -191713618 - MIR SINE MIR -139 123 14 1272 209 147 34 chr5 7916588 7916995 -191713155 - MLT1C LTR MaLR -9 458 6 525 182 20 0 chr5 7917000 7917099 -191713051 - MLT2C1 LTR ERVL -293 104 4 207 273 91 23 chr5 7918441 7918529 -191711621 + MIR SINE MIR 35 128 -80 209 256 0 0 chr5 7918555 7918598 -191711552 + MIR SINE MIR 86 128 -80 744 128 105 45 chr5 7919269 7919402 -191710748 + MER1B DNA MER1_type 1 141 -156 513 118 0 0 chr5 7919402 7919470 -191710680 + MER1B DNA MER1_type 74 141 -156 1594 141 23 19 chr5 7919470 7919733 -191710417 + MER1B DNA MER1_type 74 337 -2 200 293 40 13 chr5 7920017 7920092 -191710058 + L3 LINE CR1 460 536 -1041 306 145 24 76 chr5 7920671 7920789 -191709361 + MER20 DNA MER1_type 5 157 -62 207 0 0 0 chr5 7920791 7920814 -191709336 + (CACCC)n Simple_repeat Simple_repeat 2 24 0 1469 166 28 110 chr5 7921673 7922100 -191708050 - MLT1B LTR MaLR 0 505 1 995 208 55 128 chr5 7923186 7923346 -191706804 + MLT1C LTR MaLR 8 178 -289 2180 101 10 0 chr5 7923346 7923652 -191706498 + AluSc SINE Alu 1 309 0 995 208 55 128 chr5 7923652 7923982 -191706168 + MLT1C LTR MaLR 178 462 -5 728 119 8 0 chr5 7924114 7924232 -191705918 + (GGAA)n Simple_repeat Simple_repeat 2 120 0 210 37 0 0 chr5 7924226 7924253 -191705897 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 * 1914 117 14 0 chr5 7924264 7924546 -191705604 + AluSc SINE Alu 9 294 -15 1895 102 0 38 chr5 7924619 7924956 -191705194 - AluY SINE Alu 0 326 1 259 254 79 79 chr5 7926153 7926318 -191703832 - MER5B DNA MER1_type -7 171 7 218 217 0 17 chr5 7926365 7926425 -191703725 + CT-rich Low_complexity Low_complexity 3 61 0 763 119 23 28 chr5 7926451 7926627 -191703523 + CT-rich Low_complexity Low_complexity 2 176 0 1682 172 0 0 chr5 7927564 7927873 -191702277 + AluJo SINE Alu 5 313 0 328 266 40 102 chr5 7928079 7928256 -191701894 - L1MC4 LINE L1 -1338 6704 6539 265 279 0 0 chr5 7928283 7928351 -191701799 + (TGGA)n Simple_repeat Simple_repeat 3 70 0 1982 128 3 0 chr5 7928410 7928707 -191701443 + AluSx SINE Alu 1 298 -14 742 175 139 0 chr5 7928975 7929112 -191701038 + AluJb SINE Alu 31 186 -126 986 243 9 0 chr5 7929231 7929441 -191700709 + MER20 DNA MER1_type 2 213 -6 260 253 126 0 chr5 7929567 7929654 -191700496 - MIR SINE MIR -72 190 93 276 200 0 0 chr5 7930151 7930211 -191699939 + GA-rich Low_complexity Low_complexity 2 61 0 5259 130 19 50 chr5 7930369 7930608 -191699542 - L1MA5A LINE L1 -5 6292 6047 2030 143 18 21 chr5 7930608 7930943 -191699207 + MER1B DNA MER1_type 4 337 0 5259 130 19 50 chr5 7930943 7931198 -191698952 - L1MA5A LINE L1 -250 6047 5786 1746 117 0 4 chr5 7931198 7931455 -191698695 - AluSx SINE Alu -18 294 39 5259 130 19 50 chr5 7931455 7931906 -191698244 - L1MA5A LINE L1 -511 5786 5375 185 300 67 33 chr5 7932743 7932863 -191697287 - L2 LINE L2 -19 3294 3171 1096 178 6 10 chr5 7933391 7933733 -191696417 - MLT1B LTR MaLR 0 390 1 2192 101 0 0 chr5 7935065 7935361 -191694789 - AluSx SINE Alu -16 296 1 285 29 0 0 chr5 7936890 7936924 -191693226 + (TC)n Simple_repeat Simple_repeat 1 34 0 2419 222 30 29 chr5 7937348 7937973 -191692177 + L1ME2 LINE L1 5535 6160 -4 1992 128 0 10 chr5 7937997 7938295 -191691855 - AluSx SINE Alu -17 295 1 866 142 64 0 chr5 7939179 7939320 -191690830 + FRAM SINE Alu 1 146 -30 25 31 0 0 chr5 7939330 7939362 -191690788 + AT_rich Low_complexity Low_complexity 1 32 0 2002 101 0 14 chr5 7939380 7939656 -191690494 - AluSx SINE Alu -40 272 1 29 0 0 0 chr5 7940073 7940102 -191690048 + AT_rich Low_complexity Low_complexity 1 29 0 293 374 20 20 chr5 7940213 7940416 -191689734 + ERVL LTR ERVL 429 631 -5133 368 274 226 12 chr5 7940871 7941035 -191689115 + MLT1J LTR MaLR 1 199 -312 252 301 96 20 chr5 7941332 7941478 -191688672 - MER117 DNA MER1_type -37 160 4 655 248 125 80 chr5 7941670 7942110 -191688040 - LTR67 LTR ERVL 0 557 98 310 233 0 14 chr5 7942134 7942207 -191687943 - MLT1G3 LTR MaLR 0 567 496 6257 134 29 2 chr5 7942209 7942321 -191687829 - L1PA14 LINE L1 -2 6159 6052 2629 99 0 25 chr5 7942321 7942685 -191687465 - THE1A LTR MaLR 0 355 1 6257 134 29 2 chr5 7942685 7944488 -191685662 - L1PA14 LINE L1 -109 6052 4144 1066 243 125 33 chr5 7944536 7944979 -191685171 - MLT1G3 LTR MaLR -61 469 4 229 299 0 26 chr5 7945097 7945174 -191684976 + C-rich Low_complexity Low_complexity 1 75 0 218 306 74 25 chr5 7945221 7945342 -191684808 + MIR3 SINE MIR 30 156 -52 782 306 31 5 chr5 7945576 7945798 -191684352 + MIR SINE MIR 13 240 -22 430 215 145 50 chr5 7946859 7947101 -191683049 - L1ME4a LINE L1 -137 5984 5720 1817 114 0 43 chr5 7947226 7947565 -191682585 - AluSx SINE Alu 0 340 14 220 281 116 42 chr5 7947918 7948101 -191682049 + MIR SINE MIR 17 208 -48 257 50 0 25 chr5 7948206 7948246 -191681904 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 795 48 59 12 chr5 7948788 7949183 -191680967 + (CA)n Simple_repeat Simple_repeat 1 413 0 677 94 48 27 chr5 7949203 7949729 -191680421 + (CA)n Simple_repeat Simple_repeat 1 537 0 194 0 0 37 chr5 7950064 7950091 -191680059 + (TTCG)n Simple_repeat Simple_repeat 4 29 0 38 68 0 0 chr5 7950139 7950212 -191679938 + GC_rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr5 7950610 7950638 -191679512 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 7950652 7950676 -191679474 + GC_rich Low_complexity Low_complexity 1 24 0 326 330 0 58 chr5 7950919 7951110 -191679040 + C-rich Low_complexity Low_complexity 1 180 0 289 303 9 28 chr5 7952489 7952598 -191677552 - MIR3 SINE MIR 0 208 102 25 0 0 0 chr5 7953687 7953712 -191676438 + AT_rich Low_complexity Low_complexity 1 25 0 184 167 44 167 chr5 7954543 7954633 -191675517 - MIR SINE MIR -120 142 64 243 152 0 0 chr5 7955051 7955097 -191675053 + (CA)n Simple_repeat Simple_repeat 1 46 0 1823 141 7 7 chr5 7955245 7955535 -191674615 - AluJo SINE Alu -22 290 1 1787 133 14 30 chr5 7955563 7955903 -191674247 - MLT1B LTR MaLR 0 390 1 482 276 41 29 chr5 7956881 7957051 -191673099 - MER5B DNA MER1_type 0 178 7 193 226 123 66 chr5 7957427 7957533 -191672617 - L2 LINE L2 -23 3290 3179 559 258 16 63 chr5 7958919 7959109 -191671041 - MIR SINE MIR -19 243 63 1538 212 76 42 chr5 7960866 7961314 -191668836 - Charlie4a DNA MER1_type -42 466 4 186 281 152 47 chr5 7961502 7961673 -191668477 + MIR SINE MIR 64 252 -10 2332 53 0 0 chr5 7964951 7965279 -191664871 - AluY SINE Alu 0 328 1 808 88 0 18 chr5 7965327 7965441 -191664709 - AluSp/q SINE Alu -17 296 185 1931 144 3 0 chr5 7966334 7966633 -191663517 - AluSx SINE Alu -6 306 7 269 326 0 0 chr5 7967342 7967428 -191662722 + CT-rich Low_complexity Low_complexity 1 86 0 237 111 0 63 chr5 7968504 7968567 -191661583 + (TCCC)n Simple_repeat Simple_repeat 2 60 0 1771 171 45 19 chr5 7968609 7968983 -191661167 - MLT1B LTR MaLR -3 387 4 262 219 42 0 chr5 7970712 7970808 -191659342 + (TA)n Simple_repeat Simple_repeat 1 100 0 310 267 0 40 chr5 7970848 7970949 -191659201 + L1MC4 LINE L1 6608 6704 -1338 188 322 0 78 chr5 7971149 7971239 -191658911 - L3 LINE CR1 -1139 438 356 195 184 0 0 chr5 7971850 7971888 -191658262 + (CA)n Simple_repeat Simple_repeat 2 39 0 448 246 62 61 chr5 7972148 7972314 -191657836 - L1ME LINE L1 -455 5666 5495 1480 231 73 31 chr5 7972565 7973108 -191657042 - MLT1F1 LTR MaLR -1 566 1 435 373 97 35 chr5 7973776 7974572 -191655578 - L1ME LINE L1 -764 5382 4657 384 148 59 2 chr5 7974802 7974891 -191655259 - MLT1J2 LTR MaLR -309 141 68 210 333 114 40 chr5 7975768 7975969 -191654181 + MIR SINE MIR 21 236 -26 243 328 113 41 chr5 7976176 7976371 -191653779 + MIR SINE MIR 22 230 -32 485 327 23 32 chr5 7981521 7981738 -191648412 + MIR SINE MIR 16 230 -32 1500 228 85 7 chr5 7983259 7983684 -191646466 + MLT1C LTR MaLR 6 463 -4 554 243 36 0 chr5 7983945 7984085 -191646065 + MER20 DNA MER1_type 7 151 -68 2175 105 0 10 chr5 7984497 7984801 -191645349 + AluSx SINE Alu 1 301 -11 329 354 0 19 chr5 7986373 7986534 -191643616 + (CA)n Simple_repeat Simple_repeat 1 158 0 837 266 19 9 chr5 7987394 7987608 -191642542 - MIR SINE MIR 0 262 47 326 91 18 0 chr5 7987642 7987697 -191642453 + (CA)n Simple_repeat Simple_repeat 2 57 0 262 369 110 28 chr5 7987737 7988054 -191642096 + L2 LINE L2 2929 3271 -1 971 216 53 0 chr5 7988100 7988308 -191641842 + MER20 DNA MER1_type 1 219 0 189 74 0 0 chr5 7988432 7988459 -191641691 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 1593 169 23 36 chr5 7989858 7990166 -191639984 + AluJo SINE Alu 1 304 -8 1724 140 20 3 chr5 7990495 7990788 -191639362 + AluJo SINE Alu 12 309 -3 256 228 18 0 chr5 7995831 7995888 -191634262 + MIR SINE MIR 82 139 -69 2102 129 67 14 chr5 7999350 7999706 -191630444 + THE1C LTR MaLR 1 375 0 533 171 7 110 chr5 8001431 8001502 -191628648 + MLT1C LTR MaLR 337 414 -53 206 32 32 0 chr5 8001502 8001533 -191628617 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1718 94 109 8 chr5 8001538 8001794 -191628356 - AluSc SINE Alu -27 282 1 533 171 7 110 chr5 8001794 8001862 -191628288 + MLT1C LTR MaLR 418 467 0 700 123 0 15 chr5 8002558 8002688 -191627462 + (TGGA)n Simple_repeat Simple_repeat 2 129 0 1158 133 4 4 chr5 8002701 8002944 -191627206 + (TGGA)n Simple_repeat Simple_repeat 1 243 0 1605 213 79 86 chr5 8004496 8005068 -191625082 + MLT1E1 LTR MaLR 63 630 -24 2290 86 3 3 chr5 8005080 8005384 -191624766 - L1PB1 LINE L1 -5 6146 5843 236 259 0 0 chr5 8005385 8005439 -191624711 + MLT1E3 LTR MaLR 554 607 -17 3525 121 11 15 chr5 8005804 8006333 -191623817 - MER1A DNA MER1_type 0 527 1 644 264 85 59 chr5 8007484 8008129 -191622021 + L1MEc LINE L1 863 1524 -4872 1963 108 7 27 chr5 8008154 8008449 -191621701 + AluSx SINE Alu 1 289 -23 738 259 145 55 chr5 8008599 8009328 -191620822 + L1MEc LINE L1 3250 4044 -2171 261 270 15 44 chr5 8009361 8009498 -191620652 + L1ME3A LINE L1 6038 6170 0 210 185 37 19 chr5 8009984 8010092 -191620058 + (TG)n Simple_repeat Simple_repeat 1 110 0 247 235 17 43 chr5 8010101 8010256 -191619894 + (TATTG)n Simple_repeat Simple_repeat 1 150 0 311 323 36 52 chr5 8010274 8010632 -191619518 + L3 LINE CR1 1094 1490 -87 378 138 90 2 chr5 8011676 8011774 -191618376 + L1ME3A LINE L1 5689 5802 -376 1576 179 113 24 chr5 8011781 8012116 -191618034 - MLT1A1 LTR MaLR 0 365 1 952 254 12 75 chr5 8012116 8012218 -191617932 + L1ME3A LINE L1 5805 5912 -258 2448 43 3 13 chr5 8012218 8012521 -191617629 + AluY SINE Alu 1 300 -11 952 254 12 75 chr5 8012521 8012590 -191617560 + L1ME3A LINE L1 5912 5984 -186 2535 105 18 37 chr5 8012590 8012813 -191617337 - THE1C LTR MaLR 0 375 160 2121 113 0 0 chr5 8012813 8013105 -191617045 + AluSx SINE Alu 3 294 -18 2535 105 18 37 chr5 8013105 8013263 -191616887 - THE1C LTR MaLR -215 160 1 952 254 12 75 chr5 8013263 8013424 -191616726 + L1ME3A LINE L1 5984 6117 -53 306 228 43 33 chr5 8013606 8013698 -191616452 - MIR3 SINE MIR 0 208 116 637 256 12 18 chr5 8013746 8013910 -191616240 + MER5B DNA MER1_type 1 163 -15 192 346 140 37 chr5 8014609 8014823 -191615327 - MIR SINE MIR -19 243 8 2146 154 15 62 chr5 8015188 8015654 -191614496 + MER65A LTR ERV1 1 444 -1 1007 196 50 23 chr5 8015722 8015982 -191614168 + L1MB4 LINE L1 5914 6180 0 225 319 146 21 chr5 8016464 8016608 -191613542 - L2 LINE L2 -1870 1444 1283 258 136 0 0 chr5 8017367 8017411 -191612739 + (CA)n Simple_repeat Simple_repeat 1 44 0 695 236 154 5 chr5 8017430 8017625 -191612525 - MER58A DNA MER1_type 0 224 1 432 193 44 44 chr5 8017630 8017765 -191612385 + L1ME4a LINE L1 5982 6116 -5 769 189 43 49 chr5 8018739 8018924 -191611226 - MER20 DNA MER1_type 0 219 36 392 220 347 0 chr5 8019316 8019466 -191610684 + Charlie8 DNA MER1_type 70 271 -2146 430 296 58 32 chr5 8019761 8019950 -191610200 + MIR3 SINE MIR 12 205 -3 781 257 61 14 chr5 8019952 8020166 -191609984 - MER58A DNA MER1_type 0 224 1 493 243 90 7 chr5 8020290 8020434 -191609716 + L1MD2 LINE L1 6194 6349 -10 180 0 0 0 chr5 8020473 8020493 -191609657 + (TG)n Simple_repeat Simple_repeat 1 20 0 1859 153 0 0 chr5 8020493 8020821 -191609329 - AluJb SINE Alu 0 328 1 418 136 45 34 chr5 8021748 8021924 -191608226 + (CA)n Simple_repeat Simple_repeat 2 179 0 204 189 33 56 chr5 8021924 8022014 -191608136 + (CATA)n Simple_repeat Simple_repeat 1 88 0 375 154 47 24 chr5 8022014 8022183 -191607967 + (CA)n Simple_repeat Simple_repeat 2 174 0 255 333 30 30 chr5 8022664 8022796 -191607354 + MER5A DNA MER1_type 44 175 -14 2301 172 66 48 chr5 8023325 8023826 -191606324 - MLT2B2 LTR ERVL 0 515 6 2128 100 30 0 chr5 8023939 8024240 -191605910 - AluSx SINE Alu -2 310 1 549 305 69 24 chr5 8024240 8024486 -191605664 + L1ME LINE L1 4303 4559 -1587 2034 102 3 11 chr5 8024902 8025227 -191604923 + AluSq SINE Alu 1 323 0 405 332 144 24 chr5 8025540 8025805 -191604345 + L1ME LINE L1 5313 5617 -547 2058 147 129 5 chr5 8025805 8026186 -191603964 - MSTC LTR MaLR 0 428 1 405 332 144 24 chr5 8026186 8026212 -191603938 + L1ME LINE L1 5617 5639 -525 1736 146 3 17 chr5 8026212 8026537 -191603613 + AluJo SINE Alu 1 312 0 831 188 27 80 chr5 8026563 8026787 -191603363 + MER20 DNA MER1_type 1 212 -7 371 220 26 63 chr5 8026791 8026934 -191603216 + L1P3 LINE L1 5645 5785 -369 505 172 0 11 chr5 8027503 8027590 -191602560 + AluJo SINE Alu 89 174 -138 2025 183 30 34 chr5 8027663 8028128 -191602022 - MLT1C LTR MaLR -2 465 3 2105 159 0 38 chr5 8028403 8028645 -191601505 - MLT1A1 LTR MaLR 0 365 140 2236 99 0 0 chr5 8028645 8028947 -191601203 + AluSc SINE Alu 1 302 -7 2105 159 0 38 chr5 8028947 8029074 -191601076 - MLT1A1 LTR MaLR -225 140 10 2269 87 0 13 chr5 8029582 8029891 -191600259 + AluSc SINE Alu 1 305 -4 384 191 56 0 chr5 8031560 8031649 -191598501 + L1M4 LINE L1 5250 5343 -803 325 261 105 39 chr5 8032337 8032490 -191597660 + LTR23 LTR ERV1 275 437 0 517 188 70 48 chr5 8032931 8033105 -191597045 - L1MB7 LINE L1 -31 6135 5942 862 279 14 41 chr5 8033109 8033471 -191596679 + L1M4 LINE L1 5410 5761 -417 231 329 168 7 chr5 8033716 8033865 -191596285 - MIR SINE MIR -78 184 12 1643 210 68 23 chr5 8034350 8034789 -191595361 + MLT1C LTR MaLR 8 466 -1 201 354 122 0 chr5 8035089 8035171 -191594979 + MIR SINE MIR 149 240 -22 227 215 15 0 chr5 8035633 8035698 -191594452 + (CA)n Simple_repeat Simple_repeat 2 67 0 204 302 35 86 chr5 8035811 8035927 -191594223 - L2 LINE L2 -194 3078 2969 376 238 166 0 chr5 8036389 8036540 -191593610 - MER91A DNA MER1_type -4 192 17 291 292 184 0 chr5 8037523 8037691 -191592459 + LTR53 LTR ERVL 3 201 -318 * 1584 232 84 9 chr5 8037689 8038116 -191592034 + MER68 LTR ERV1 104 562 0 2117 168 55 2 chr5 8038623 8039027 -191591123 - MSTB LTR MaLR 0 426 2 442 249 87 22 chr5 8039028 8039257 -191590893 + MER74B LTR ERVL 227 470 -152 1991 102 16 26 chr5 8039501 8039805 -191590345 + AluSg SINE Alu 1 301 -9 1510 159 73 14 chr5 8041565 8041854 -191588296 + AluJo SINE Alu 1 306 -6 689 183 15 8 chr5 8041948 8042079 -191588071 + MER47A DNA MER2_type 24 155 -211 2159 134 119 0 chr5 8042081 8042468 -191587682 - L1MA4 LINE L1 -262 6038 5606 540 230 79 0 chr5 8042471 8042623 -191587527 + L1MA4 LINE L1 6084 6247 -53 735 184 184 14 chr5 8042623 8042835 -191587315 + MER47A DNA MER2_type 119 366 0 1452 261 87 18 chr5 8043529 8043720 -191586430 + L1M4 LINE L1 2128 2304 -3842 330 67 0 0 chr5 8043720 8043765 -191586385 + (TA)n Simple_repeat Simple_repeat 1 45 0 1488 194 3 3 chr5 8043765 8044058 -191586092 - AluJb SINE Alu -3 309 17 1452 261 87 18 chr5 8044058 8044487 -191585663 + L1M4 LINE L1 2303 2792 -3354 1495 179 30 0 chr5 8044678 8044941 -191585209 - MSTB1 LTR MaLR -160 272 2 791 103 0 0 chr5 8045102 8045209 -191584941 + AluSg/x SINE Alu 191 297 -15 657 238 57 5 chr5 8045768 8045961 -191584189 - L1MD3 LINE L1 0 7995 7793 228 149 0 43 chr5 8045987 8046034 -191584116 + MLT1L LTR MaLR 567 611 -4 616 316 126 49 chr5 8046684 8047335 -191582815 + L1M4 LINE L1 3716 4416 -1730 1992 144 33 11 chr5 8047621 8047982 -191582168 - L1PA13 LINE L1 -1 6162 5794 19216 100 9 30 chr5 8048495 8051253 -191578897 + Charlie3 DNA MER1_type 1 2700 -10 269 267 6 0 chr5 8051328 8051504 -191578646 + (CA)n Simple_repeat Simple_repeat 1 177 0 439 311 0 16 chr5 8051542 8051725 -191578425 + (CA)n Simple_repeat Simple_repeat 1 180 0 264 291 0 0 chr5 8051765 8051940 -191578210 + (CA)n Simple_repeat Simple_repeat 2 176 0 1977 106 19 13 chr5 8052045 8052356 -191577794 + L1PA13 LINE L1 5847 6159 -4 417 288 128 49 chr5 8052940 8053166 -191576984 + MIR SINE MIR 17 260 -2 360 294 91 16 chr5 8054602 8054789 -191575361 + L3 LINE CR1 1066 1266 -311 366 302 72 29 chr5 8055845 8056222 -191573928 - L1MDa LINE L1 -3443 3097 2705 415 167 0 0 chr5 8056255 8056327 -191573823 + MER116 DNA Mariner 6 77 -3 278 239 71 16 chr5 8056344 8056505 -191573645 - L1MDa LINE L1 -3959 2581 2480 1049 153 36 31 chr5 8056650 8056846 -191573304 + MER3 DNA MER1_type 13 209 0 301 167 0 0 chr5 8056803 8056851 -191573299 - MER3 DNA MER1_type -119 90 43 * 597 318 135 56 chr5 8057034 8057762 -191572388 - L1MDa LINE L1 -833 2068 1137 186 143 0 0 chr5 8057806 8057841 -191572309 + (T)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr5 8058474 8058496 -191571654 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 8059250 8059272 -191570878 + AT_rich Low_complexity Low_complexity 1 22 0 379 270 50 0 chr5 8059509 8059609 -191570541 - MIR3 SINE MIR -4 204 100 254 323 38 70 chr5 8060193 8060379 -191569771 - MIR SINE MIR -37 225 46 297 256 185 31 chr5 8060425 8060620 -191569530 + L2 LINE L2 2828 3052 -220 2108 105 0 3 chr5 8062057 8062351 -191567799 + AluSx SINE Alu 1 293 -19 341 260 77 19 chr5 8063125 8063229 -191566921 + MIR SINE MIR 34 143 -119 207 197 13 26 chr5 8063878 8063954 -191566196 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 461 319 24 0 chr5 8064222 8064391 -191565759 - MER63A DNA MER1_type -37 173 1 2406 219 56 26 chr5 8065039 8065692 -191564458 - L1ME1 LINE L1 -5 6230 5553 1975 123 0 38 chr5 8065692 8066009 -191564141 - AluSx SINE Alu -7 305 1 2406 219 56 26 chr5 8066009 8066048 -191564102 - L1ME1 LINE L1 -682 5553 5517 765 248 50 31 chr5 8066127 8066483 -191563667 - L1ME1 LINE L1 -3766 2480 2108 27 0 0 0 chr5 8067167 8067194 -191562956 + AT_rich Low_complexity Low_complexity 1 27 0 4707 54 7 3 chr5 8067194 8067772 -191562378 - L1PA5 LINE L1 -4 6150 5571 1276 270 101 24 chr5 8068064 8068560 -191561590 - MER90 LTR ERV1 0 614 81 231 105 35 53 chr5 8069138 8069195 -191560955 + A-rich Low_complexity Low_complexity 3 58 0 396 264 31 78 chr5 8069860 8070053 -191560097 + MLT1J2 LTR MaLR 267 450 0 244 198 238 8 chr5 8072769 8072895 -191557255 + LTR33A LTR ERVL 318 472 -51 2139 182 33 12 chr5 8073839 8074263 -191555887 + L1MC1 LINE L1 5899 6331 -2 198 174 0 0 chr5 8074478 8074524 -191555626 + (CA)n Simple_repeat Simple_repeat 1 46 0 478 317 79 72 chr5 8074647 8075092 -191555058 - L1 LINE L1 -817 5329 4882 302 280 68 49 chr5 8075115 8075379 -191554771 - L1 LINE L1 -1316 4830 4562 21 0 0 0 chr5 8075991 8076012 -191554138 + AT_rich Low_complexity Low_complexity 1 21 0 1247 232 69 12 chr5 8078311 8078630 -191551520 - MER58B DNA MER1_type -4 337 1 456 313 46 26 chr5 8078878 8079073 -191551077 - MIR SINE MIR 0 262 64 307 227 21 0 chr5 8080071 8080168 -191549982 + (CA)n Simple_repeat Simple_repeat 1 99 0 608 208 17 6 chr5 8080194 8080372 -191549778 + (CA)n Simple_repeat Simple_repeat 1 180 0 238 300 29 0 chr5 8080374 8080444 -191549706 + (CACG)n Simple_repeat Simple_repeat 1 72 0 393 250 17 0 chr5 8080444 8080616 -191549534 + (CA)n Simple_repeat Simple_repeat 1 175 0 190 255 21 0 chr5 8080638 8080732 -191549418 + (CA)n Simple_repeat Simple_repeat 1 96 0 1426 207 63 17 chr5 8081203 8081551 -191548599 + MLT2D LTR ERVL 1 364 -50 291 28 0 0 chr5 8081579 8081615 -191548535 + (TG)n Simple_repeat Simple_repeat 2 37 0 209 108 27 0 chr5 8081855 8081892 -191548258 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 664 274 21 11 chr5 8083639 8083825 -191546325 + MIR SINE MIR 65 252 -10 223 255 0 0 chr5 8084421 8084472 -191545678 + A-rich Low_complexity Low_complexity 2 52 0 1677 177 76 0 chr5 8085003 8085319 -191544831 + MSTB LTR MaLR 87 426 0 392 55 103 7 chr5 8085515 8085660 -191544490 + (TA)n Simple_repeat Simple_repeat 1 159 0 517 248 15 7 chr5 8087216 8087353 -191542797 - LTR41 LTR ERVL -618 155 18 463 276 247 17 chr5 8087394 8087738 -191542412 - L2 LINE L2 -71 3242 2820 513 349 0 0 chr5 8087746 8087921 -191542229 + (TG)n Simple_repeat Simple_repeat 1 175 0 987 260 72 16 chr5 8088138 8088442 -191541708 - L2 LINE L2 -512 2802 2482 800 83 0 0 chr5 8092059 8092168 -191537982 - AluY SINE Alu -13 298 190 556 69 0 0 chr5 8092168 8092240 -191537910 - AluY SINE Alu -47 264 193 2150 28 47 0 chr5 8092240 8092494 -191537656 - AluY SINE Alu -44 267 2 371 178 122 11 chr5 8093197 8093287 -191536863 - MLT1J LTR MaLR 0 511 412 543 270 22 22 chr5 8093479 8093657 -191536493 - MLT1J LTR MaLR -330 181 4 1036 249 160 15 chr5 8093737 8094138 -191536012 - LTR40b LTR ERVL 0 462 4 189 281 104 21 chr5 8095041 8095137 -191535013 - MIR3 SINE MIR -28 180 77 502 283 83 86 chr5 8095269 8095690 -191534460 + L2 LINE L2 2848 3267 -5 473 245 64 56 chr5 8095860 8096063 -191534087 - MIR SINE MIR -55 207 3 184 246 290 14 chr5 8096430 8096568 -191533582 - MER5B DNA MER1_type 0 178 3 182 191 0 32 chr5 8097040 8097103 -191533047 + GA-rich Low_complexity Low_complexity 4 64 0 1430 160 9 4 chr5 8097183 8097414 -191532736 - AluSg/x SINE Alu -14 298 67 234 0 0 0 chr5 8097441 8097467 -191532683 + (CA)n Simple_repeat Simple_repeat 2 27 0 563 329 68 39 chr5 8098152 8098201 -191531949 - L1M4 LINE L1 -2970 3176 3130 2560 60 3 0 chr5 8098201 8098501 -191531649 + AluY SINE Alu 1 301 -10 563 329 68 39 chr5 8098501 8098864 -191531286 - L1M4 LINE L1 -3016 3130 2752 728 169 29 0 chr5 8098983 8099155 -191530995 + GA-rich Low_complexity Low_complexity 4 180 0 504 106 0 64 chr5 8099308 8099402 -191530748 - FLAM_A SINE Alu 0 142 55 235 299 39 24 chr5 8099657 8099784 -191530366 + MLT2F LTR ERVL 2 130 -533 487 240 76 55 chr5 8099818 8100093 -191530057 + MLT2F LTR ERVL 234 514 -149 634 192 41 7 chr5 8100542 8100688 -191529462 - MER20 DNA MER1_type -66 153 3 401 223 18 9 chr5 8101062 8101174 -191528976 + MER89 LTR ERV1 447 559 0 540 219 48 37 chr5 8101403 8101590 -191528560 - MER53 DNA DNA 0 189 1 527 245 82 55 chr5 8102302 8102559 -191527591 + LTR37B LTR ERV1 141 404 -64 2396 97 0 3 chr5 8102764 8103064 -191527086 + AluSg SINE Alu 1 299 -11 2555 65 10 0 chr5 8103066 8103374 -191526776 + AluY SINE Alu 1 311 0 190 0 67 0 chr5 8104113 8104143 -191526007 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 1695 191 13 34 chr5 8104262 8104632 -191525518 - MLT2C1 LTR ERVL -20 534 9 1074 183 0 11 chr5 8104636 8104822 -191525328 + AluJb SINE Alu 119 302 -10 2200 138 33 33 chr5 8106596 8106958 -191523192 - THE1B LTR MaLR 0 364 3 614 289 87 24 chr5 8107557 8107855 -191522295 - L1MC4a LINE L1 -1914 5894 5578 1383 220 79 86 chr5 8108399 8108971 -191521179 + MLT1E1 LTR MaLR 63 630 -24 2297 88 3 3 chr5 8108980 8109287 -191520863 - L1PB1 LINE L1 -2 6149 5843 225 259 0 0 chr5 8109288 8109342 -191520808 + MLT1E3 LTR MaLR 554 607 -17 1015 234 52 101 chr5 8109496 8109980 -191520170 - MLT1C LTR MaLR -2 465 6 183 42 0 0 chr5 8112226 8112250 -191517900 + (CAGCC)n Simple_repeat Simple_repeat 1 24 0 741 223 60 30 chr5 8112328 8112561 -191517589 + MLT1D LTR MaLR 8 247 -258 587 238 131 0 chr5 8112602 8112762 -191517388 + MLT1D LTR MaLR 325 505 0 1973 153 124 3 chr5 8112798 8113176 -191516974 + MSTA LTR MaLR 1 424 -4 216 307 98 42 chr5 8114565 8114964 -191515186 + L2 LINE L2 2647 3110 -203 1675 236 29 45 chr5 8115033 8115189 -191514961 - MER65B LTR ERV1 -22 509 352 2066 45 16 0 chr5 8115189 8115433 -191514717 - AluY SINE Alu -2 309 62 1675 236 29 45 chr5 8115433 8115713 -191514437 - MER65B LTR ERV1 -179 352 80 2510 118 47 35 chr5 8115713 8116136 -191514014 - MSTA LTR MaLR 0 428 1 1675 236 29 45 chr5 8116136 8116215 -191513935 - MER65B LTR ERV1 -451 80 1 1251 275 22 6 chr5 8116215 8116579 -191513571 - MER65B-int LTR ERV1 0 4871 4502 2190 110 0 42 chr5 8116669 8116947 -191513203 + AluSq SINE Alu 1 266 -47 2444 57 14 7 chr5 8116947 8117243 -191512907 + AluY SINE Alu 1 298 -13 2190 110 0 42 chr5 8117243 8117274 -191512876 + AluSq SINE Alu 266 297 -16 1315 257 81 19 chr5 8117596 8117966 -191512184 - MER65B-int LTR ERV1 -850 4021 3629 563 188 5 6 chr5 8117972 8118095 -191512055 - MER65-int LTR ERV1 -491 5772 4136 1479 243 57 81 chr5 8118104 8119528 -191510622 - MER65-int LTR ERV1 -1024 5574 2842 437 275 21 47 chr5 8119577 8119770 -191510380 - MER65-int LTR ERV1 -2866 3732 3545 381 247 50 44 chr5 8120067 8120416 -191509734 - MER65-int LTR ERV1 -1719 3161 2224 279 170 30 156 chr5 8120459 8120594 -191509556 - MER65-int LTR ERV1 -6402 1718 1601 2375 108 0 0 chr5 8120621 8120926 -191509224 + AluSq SINE Alu 1 305 -8 369 0 0 0 chr5 8120926 8120967 -191509183 + (TA)n Simple_repeat Simple_repeat 1 41 0 1556 85 9 9 chr5 8121147 8121371 -191508779 + L1PA10 LINE L1 5944 6167 -1 1245 213 98 90 chr5 8121371 8122186 -191507964 - MER65-int LTR ERV1 -2381 2490 725 872 234 49 16 chr5 8122186 8122430 -191507720 - MER34 LTR ERV1 -257 285 34 2304 98 46 52 chr5 8122928 8123294 -191506856 - THE1B LTR MaLR 0 364 1 1427 232 32 76 chr5 8123558 8124113 -191506037 - MER65B LTR ERV1 0 531 1 990 155 17 11 chr5 8124622 8124796 -191505354 + MER53 DNA DNA 2 176 -13 296 366 77 11 chr5 8126099 8126282 -191503868 + L3 LINE CR1 395 589 -988 479 350 10 10 chr5 8126423 8126617 -191503533 + L3 LINE CR1 655 848 -729 293 311 63 35 chr5 8126858 8127112 -191503038 + L1MEd LINE L1 30 290 -5829 834 225 87 42 chr5 8127900 8128255 -191501895 - MLT1A2 LTR MaLR 0 374 4 657 226 0 7 chr5 8128728 8128874 -191501276 - L1MB3 LINE L1 -3 6180 6036 1156 192 18 1 chr5 8128876 8129110 -191501040 - L1MB3 LINE L1 -211 5972 5734 2649 35 0 0 chr5 8129503 8129815 -191500335 + AluYb8 SINE Alu 6 317 -1 447 296 121 19 chr5 8129815 8130021 -191500129 + L3 LINE CR1 1340 1566 -11 275 318 11 0 chr5 8131228 8131316 -191498834 - MIR SINE MIR -80 182 94 1584 170 58 21 chr5 8131382 8131712 -191498438 + MLT2C2 LTR ERVL 1 342 -122 518 182 71 14 chr5 8131774 8131938 -191498212 + MLT2C2 LTR ERVL 202 414 0 1554 32 0 11 chr5 8132539 8132727 -191497423 + L1PA4 LINE L1 5969 6154 -1 24 0 0 0 chr5 8132767 8132791 -191497359 + AT_rich Low_complexity Low_complexity 1 24 0 917 321 118 0 chr5 8135059 8135408 -191494742 - MLT1J LTR MaLR -121 390 1 1067 105 15 90 chr5 8135446 8135548 -191494602 + MER2 DNA MER2_type 1 82 -263 1671 166 14 3 chr5 8135548 8135837 -191494313 + AluJb SINE Alu 1 292 -20 1067 105 15 90 chr5 8135837 8135934 -191494216 + MER2 DNA MER2_type 82 185 -160 613 193 14 0 chr5 8136661 8136806 -191493344 + CT-rich Low_complexity Low_complexity 3 149 0 2308 85 3 0 chr5 8138431 8138736 -191491414 + AluSp SINE Alu 1 306 -7 2785 150 21 2 chr5 8138787 8139259 -191490891 + MER41B LTR ERV1 155 635 0 505 207 17 9 chr5 8139259 8139375 -191490775 - MLT2C1 LTR ERVL -280 117 1 601 341 41 45 chr5 8139427 8139601 -191490549 - L1MB3 LINE L1 -767 5379 5537 206 61 0 30 chr5 8139601 8139634 -191490516 + (CCCCCA)n Simple_repeat Simple_repeat 4 35 0 601 341 41 45 chr5 8139634 8139957 -191490193 - L1MB3 LINE L1 -608 5538 5215 427 267 125 46 chr5 8140295 8140535 -191489615 - L1MB3 LINE L1 -1489 4657 4399 2168 102 23 3 chr5 8142463 8142767 -191487383 + AluSx SINE Alu 1 310 -2 1039 231 14 59 chr5 8143128 8143418 -191486732 + MLT2B1 LTR ERVL 1 277 -243 2277 146 32 53 chr5 8143484 8143916 -191486234 + Tigger2a DNA MER2_type 1 423 -11 236 130 0 111 chr5 8143933 8143987 -191486163 + MLT2B1 LTR ERVL 465 512 -8 359 323 93 0 chr5 8144081 8144242 -191485908 + MIR3 SINE MIR 20 195 -13 * 372 319 35 0 chr5 8144240 8144353 -191485797 + L2 LINE L2 3196 3312 -1 1081 124 15 0 chr5 8144365 8144695 -191485455 + (TGGA)n Simple_repeat Simple_repeat 1 336 0 913 285 171 34 chr5 8145853 8146537 -191483613 - L2 LINE L2 0 3313 2499 945 183 18 0 chr5 8146641 8146805 -191483345 - MER20 DNA MER1_type -3 216 50 2170 191 20 54 chr5 8146812 8147194 -191482956 + L1MB5 LINE L1 5696 6059 -115 2223 84 11 0 chr5 8147194 8147481 -191482669 + AluSq SINE Alu 3 292 -21 2170 191 20 54 chr5 8147481 8147594 -191482556 + L1MB5 LINE L1 6059 6174 0 359 224 0 0 chr5 8147619 8147686 -191482464 - MER20 DNA MER1_type -152 67 1 935 226 5 0 chr5 8148986 8149172 -191480978 + MLT1A2 LTR MaLR 1 187 -187 330 26 0 0 chr5 8149205 8149244 -191480906 + (CA)n Simple_repeat Simple_repeat 2 40 0 236 173 173 0 chr5 8149253 8149305 -191480845 + MLT1A2 LTR MaLR 178 238 -127 1218 259 69 16 chr5 8149727 8150159 -191479991 + MLT1C LTR MaLR 13 467 0 238 307 144 20 chr5 8150666 8150868 -191479282 + L2 LINE L2 255 481 -2833 1173 273 39 3 chr5 8150871 8151226 -191478924 - MER87 LTR ERV1 0 541 174 324 269 11 0 chr5 8151456 8151549 -191478601 + MER5A DNA MER1_type 13 106 -83 481 254 294 13 chr5 8151669 8152037 -191478113 + L2 LINE L2 1103 1581 -1733 1902 92 0 32 chr5 8152037 8152318 -191477832 - AluSx SINE Alu -7 305 34 2416 106 25 17 chr5 8153375 8153733 -191476417 + THE1C LTR MaLR 13 373 -2 233 320 124 0 chr5 8154300 8154397 -191475753 - MIR3 SINE MIR -94 114 6 489 75 118 11 chr5 8154817 8154910 -191475240 - L1MB8 LINE L1 -35 6143 6041 1032 254 42 37 chr5 8155028 8155084 -191475066 - L1MEc LINE L1 -2978 3237 3183 2003 126 0 10 chr5 8155084 8155394 -191474756 - AluSg SINE Alu -3 307 1 1032 254 42 37 chr5 8155394 8155531 -191474619 - L1MEc LINE L1 -3032 3183 3048 2193 124 52 22 chr5 8155531 8155895 -191474255 - THE1C LTR MaLR 0 375 1 1032 254 42 37 chr5 8155895 8156503 -191473647 - L1MEc LINE L1 -3167 3048 2445 1657 165 3 3 chr5 8156503 8156794 -191473356 + AluJb SINE Alu 19 309 -3 330 67 0 0 chr5 8156794 8156839 -191473311 + (TA)n Simple_repeat Simple_repeat 1 45 0 1032 254 42 37 chr5 8156839 8157148 -191473002 - L1MEc LINE L1 -3769 2446 2120 344 320 67 44 chr5 8157426 8158083 -191472067 + L1M4 LINE L1 3764 4435 -1711 420 300 90 45 chr5 8158265 8158549 -191471601 - L1ME4a LINE L1 -149 5972 5673 2423 126 8 13 chr5 8158578 8158952 -191471198 - L1PB3 LINE L1 -1 6153 5782 192 96 0 58 chr5 8158958 8159010 -191471140 + (TA)n Simple_repeat Simple_repeat 1 49 0 5379 177 22 4 chr5 8159010 8160659 -191469491 - L1PB3 LINE L1 -359 5795 4118 1669 170 20 20 chr5 8161114 8161420 -191468730 - AluJo SINE Alu -6 306 1 1518 158 82 7 chr5 8162509 8162788 -191467362 - AluJb SINE Alu -12 300 1 267 340 19 0 chr5 8163696 8163799 -191466351 - L2 LINE L2 -1 3312 3208 320 262 155 56 chr5 8165100 8165352 -191464798 + MLT1I LTR MaLR 110 386 -23 256 59 118 0 chr5 8165518 8165569 -191464581 + CT-rich Low_complexity Low_complexity 1 57 0 * 286 176 24 24 chr5 8165562 8165647 -191464503 + C-rich Low_complexity Low_complexity 3 87 0 1126 176 14 23 chr5 8165651 8165872 -191464278 - AluJo SINE Alu -24 288 70 231 108 0 0 chr5 8165898 8165924 -191464226 + (A)n Simple_repeat Simple_repeat 1 29 -8 2217 95 3 13 chr5 8165924 8166239 -191463911 + AluSx SINE Alu 1 312 0 231 108 0 0 chr5 8166239 8166249 -191463901 + (A)n Simple_repeat Simple_repeat 28 37 0 246 301 173 39 chr5 8167332 8167894 -191462256 + L2 LINE L2 2127 2763 -551 410 260 39 10 chr5 8168471 8168575 -191461575 - MIR SINE MIR -139 123 17 1256 245 29 56 chr5 8169299 8169756 -191460394 + MLT1J2 LTR MaLR 1 395 -14 388 247 0 0 chr5 8170327 8170408 -191459742 - MER20 DNA MER1_type -134 85 5 348 163 168 0 chr5 8170525 8170605 -191459545 + MLT1C LTR MaLR 8 99 -295 338 277 149 76 chr5 8170803 8171132 -191459018 + MLT1J LTR MaLR 109 461 -50 740 223 40 55 chr5 8171206 8171408 -191458742 + MLT1C LTR MaLR 53 251 -216 * 1063 220 160 60 chr5 8171407 8171876 -191458274 + MLT1H LTR MaLR 26 541 -8 316 326 67 17 chr5 8171940 8172118 -191458032 - MER5A DNA MER1_type -1 188 2 1910 142 0 0 chr5 8172337 8172619 -191457531 + AluSx SINE Alu 1 282 -30 230 116 0 0 chr5 8172656 8172699 -191457451 - LTR66 LTR ERVL -171 439 397 231 255 128 60 chr5 8172952 8173101 -191457049 - L2 LINE L2 -3 3310 3152 1570 166 53 111 chr5 8173101 8173589 -191456561 + MLT1C LTR MaLR 4 463 -4 924 256 130 38 chr5 8173626 8173923 -191456227 - L2 LINE L2 -238 3034 2766 2553 106 16 5 chr5 8173923 8174291 -191455859 - L1PA10 LINE L1 -2 6166 5795 924 256 130 38 chr5 8174291 8174566 -191455584 - L2 LINE L2 -506 2766 2418 21 57 0 0 chr5 8175723 8175758 -191454392 + GC_rich Low_complexity Low_complexity 1 35 0 225 65 0 0 chr5 8176000 8176031 -191454119 + (CCCCCG)n Simple_repeat Simple_repeat 3 33 0 198 0 0 0 chr5 8176099 8176121 -191454029 + (CCG)n Simple_repeat Simple_repeat 3 24 0 25 51 0 0 chr5 8176203 8176242 -191453908 + GC_rich Low_complexity Low_complexity 1 39 0 214 209 7 61 chr5 8176277 8176425 -191453725 + (CCG)n Simple_repeat Simple_repeat 1 140 0 249 33 0 0 chr5 8176473 8176503 -191453647 + (CCG)n Simple_repeat Simple_repeat 1 30 0 70 24 0 0 chr5 8176527 8176611 -191453539 + GC_rich Low_complexity Low_complexity 1 84 0 203 196 36 0 chr5 8176747 8176803 -191453347 + (CGG)n Simple_repeat Simple_repeat 1 58 0 220 125 97 28 chr5 8176807 8176879 -191453271 + (CCGCG)n Simple_repeat Simple_repeat 3 79 0 21 36 0 0 chr5 8176889 8176917 -191453233 + GC_rich Low_complexity Low_complexity 1 28 0 189 154 0 0 chr5 8176925 8176964 -191453186 + (TCG)n Simple_repeat Simple_repeat 2 40 0 300 290 113 46 chr5 8177218 8177501 -191452649 + L1MCa LINE L1 1994 2295 -4131 22 35 0 0 chr5 8177501 8177530 -191452620 + AT_rich Low_complexity Low_complexity 1 29 0 2642 172 186 122 chr5 8177532 8178073 -191452077 - L1MC3 LINE L1 -19 7766 7261 275 279 48 19 chr5 8178073 8178177 -191451973 - MLT1F1 LTR MaLR -426 141 35 2642 172 186 122 chr5 8178177 8178233 -191451917 - L1MC3 LINE L1 -524 7261 7210 225 65 0 0 chr5 8178233 8178264 -191451886 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2642 172 186 122 chr5 8178264 8178552 -191451598 - L1MC3 LINE L1 -575 7210 6714 24 32 0 0 chr5 8178604 8178635 -191451515 + AT_rich Low_complexity Low_complexity 1 31 0 1927 132 3 3 chr5 8178673 8178976 -191451174 - AluSx SINE Alu -9 303 1 323 295 76 78 chr5 8178997 8179389 -191450761 - L1MEc LINE L1 -2690 3525 3028 29 28 0 0 chr5 8179506 8179542 -191450608 + AT_rich Low_complexity Low_complexity 1 36 0 301 345 31 31 chr5 8179704 8180009 -191450141 - L1MEc LINE L1 -3643 2572 2285 2048 88 7 14 chr5 8180050 8180346 -191449804 + AluSq SINE Alu 1 294 -19 219 186 0 0 chr5 8180390 8180433 -191449717 + CT-rich Low_complexity Low_complexity 3 45 0 510 241 73 55 chr5 8180473 8180693 -191449457 + LTR67 LTR ERVL 68 291 -266 1059 263 89 9 chr5 8181255 8181593 -191448557 + MLT1A1 LTR MaLR 1 365 0 1334 189 164 44 chr5 8182065 8182498 -191447652 - MLT1D LTR MaLR -20 485 1 1237 102 10 56 chr5 8182573 8182770 -191447380 - THE1B LTR MaLR 0 364 177 2088 112 137 3 chr5 8182772 8183094 -191447056 - MLT2A2 LTR ERVL -88 365 1 1779 214 59 0 chr5 8183357 8183763 -191446387 - L1MD3 LINE L1 -19 7976 7547 21 0 0 0 chr5 8184363 8184384 -191445766 + AT_rich Low_complexity Low_complexity 1 21 0 182 315 45 36 chr5 8184577 8184688 -191445462 + L2 LINE L2 1437 1548 -1766 515 260 0 7 chr5 8186260 8186563 -191443587 + (CA)n Simple_repeat Simple_repeat 1 300 0 1108 246 83 77 chr5 8186878 8187374 -191442776 + MLT1F1 LTR MaLR 68 566 -1 1286 147 7 8 chr5 8187685 8187906 -191442244 - MLT2B3 LTR ERVL -195 219 1 1580 233 37 22 chr5 8187910 8188369 -191441781 - MLT1C LTR MaLR -1 466 1 433 296 103 29 chr5 8190471 8190714 -191439436 + L1MC4a LINE L1 5135 5395 -751 572 246 315 11 chr5 8190714 8191092 -191439058 + L2 LINE L2 2417 2909 -405 227 182 23 0 chr5 8191095 8191139 -191439011 + MLT1G LTR MaLR 1 45 -550 2007 183 39 9 chr5 8191140 8191517 -191438633 + MLT2D LTR ERVL 1 480 -40 243 0 0 0 chr5 8191531 8191558 -191438592 + (TG)n Simple_repeat Simple_repeat 2 28 0 1306 204 31 40 chr5 8191698 8192048 -191438102 + MLT1G LTR MaLR 161 571 0 757 272 71 58 chr5 8192096 8192475 -191437675 + L2 LINE L2 2926 3309 -4 1104 287 30 38 chr5 8192502 8193028 -191437122 + L1MC4a LINE L1 5407 5928 -1880 1283 229 93 41 chr5 8194329 8194769 -191435381 + MLT1C LTR MaLR 1 463 -4 231 214 89 0 chr5 8194802 8194858 -191435292 + L2 LINE L2 3210 3270 -2 415 304 91 32 chr5 8196539 8196759 -191433391 + MIR SINE MIR 16 248 -14 21 36 0 0 chr5 8196970 8196998 -191433152 + AT_rich Low_complexity Low_complexity 1 28 0 1825 105 66 21 chr5 8197876 8198162 -191431988 - AluSq SINE Alu -13 300 2 1615 173 24 64 chr5 8198383 8198758 -191431392 + MLT1A1 LTR MaLR 1 360 -5 2350 61 3 3 chr5 8198941 8199237 -191430913 + AluY SINE Alu 1 296 -15 1178 232 95 34 chr5 8199545 8199797 -191430353 - MLT1C LTR MaLR 0 467 183 2108 109 0 0 chr5 8199797 8200090 -191430060 - AluSc SINE Alu -16 293 1 1178 232 95 34 chr5 8200090 8200217 -191429933 - MLT1C LTR MaLR -284 183 65 2328 102 50 44 chr5 8200355 8200566 -191429584 - THE1B LTR MaLR 0 364 148 1913 114 4 4 chr5 8200566 8200876 -191429274 + AluSc SINE Alu 1 310 0 2328 102 50 44 chr5 8200876 8201025 -191429125 - THE1B LTR MaLR -216 148 1 309 217 98 22 chr5 8201758 8201850 -191428300 - MLT1D LTR MaLR -356 149 51 308 285 156 38 chr5 8203060 8203246 -191426904 + MIR SINE MIR 31 238 -24 232 299 244 17 chr5 8203245 8203593 -191426557 + L2 LINE L2 2887 3313 0 * 629 201 98 24 chr5 8205339 8205503 -191424647 - MER45A DNA AcHobo 0 178 3 5419 106 24 20 chr5 8205795 8205828 -191424322 + L1PA16 LINE L1 5332 5363 -803 1175 59 0 182 chr5 8205828 8206064 -191424086 + 7SK RNA RNA 1 193 0 5419 106 24 20 chr5 8206064 8206861 -191423289 + L1PA16 LINE L1 5363 6165 -1 2137 100 0 10 chr5 8207552 8207861 -191422289 + AluSg SINE Alu 2 307 -3 297 215 88 73 chr5 8207862 8208067 -191422083 + L1MC/D LINE L1 3115 3322 -2824 2592 242 46 31 chr5 8208071 8209029 -191421121 + L1MC/D LINE L1 3575 4546 -1600 836 97 0 0 chr5 8209034 8209147 -191421003 - AluSq SINE Alu -48 265 153 599 256 6 0 chr5 8209154 8209310 -191420840 + L1MC/D LINE L1 4563 4719 -1427 360 0 0 0 chr5 8209377 8209417 -191420733 + (TG)n Simple_repeat Simple_repeat 1 40 0 821 166 7 0 chr5 8209420 8209559 -191420591 - FLAM_C SINE Alu -3 140 1 363 277 103 79 chr5 8209587 8209879 -191420271 - L1MEc LINE L1 -4091 2305 2007 25 0 0 0 chr5 8210340 8210365 -191419785 + AT_rich Low_complexity Low_complexity 1 25 0 1681 127 67 0 chr5 8210465 8210732 -191419418 - AluSq SINE Alu -28 285 1 232 215 83 42 chr5 8211075 8211219 -191418931 + L1MC/D LINE L1 5189 5338 -808 374 341 150 30 chr5 8211221 8211488 -191418662 + L1MC/D LINE L1 5525 5823 -1985 853 85 0 0 chr5 8211514 8211632 -191418518 - AluY SINE Alu -21 290 173 387 0 0 0 chr5 8211688 8211731 -191418419 + (CA)n Simple_repeat Simple_repeat 2 44 0 2536 186 35 2 chr5 8211750 8212239 -191417911 - MLT1D LTR MaLR 0 505 1 180 0 0 0 chr5 8212314 8212334 -191417816 + (TC)n Simple_repeat Simple_repeat 1 20 0 21 104 0 0 chr5 8212348 8212425 -191417725 + AT_rich Low_complexity Low_complexity 1 77 0 456 294 0 27 chr5 8212540 8212724 -191417426 + (TG)n Simple_repeat Simple_repeat 2 180 0 241 156 0 0 chr5 8214966 8215011 -191415139 + L2 LINE L2 3018 3062 -210 1668 71 0 0 chr5 8215549 8215760 -191414390 - AluSg/x SINE Alu -25 285 75 1965 131 103 25 chr5 8215887 8216254 -191413896 + MLT2C1 LTR ERVL 2 397 0 710 98 46 12 chr5 8218318 8218491 -191411659 + (CA)n Simple_repeat Simple_repeat 2 180 0 256 191 35 9 chr5 8218515 8218630 -191411520 + (CA)n Simple_repeat Simple_repeat 2 119 0 1487 190 65 50 chr5 8218636 8219020 -191411130 + MLT1B LTR MaLR 1 390 0 1913 289 52 72 chr5 8219029 8220004 -191410146 - ERVL LTR ERVL -2955 2809 1854 398 292 39 8 chr5 8220034 8220164 -191409986 + L2 LINE L2 3138 3271 -1 1280 215 134 6 chr5 8220788 8221123 -191409027 - L1MD3 LINE L1 -13 7982 7605 1386 222 57 40 chr5 8221493 8221863 -191408287 - MLT2B3 LTR ERVL -4 550 175 313 259 65 0 chr5 8221869 8221977 -191408173 - MLT1J2 LTR MaLR -313 137 23 180 240 87 87 chr5 8222854 8222958 -191407192 + L2 LINE L2 2729 2832 -482 614 241 143 52 chr5 8223276 8223636 -191406514 - MLT1J2 LTR MaLR -1 445 41 1180 275 142 53 chr5 8223724 8224345 -191405805 - MER50 LTR ERV1 -58 676 1 257 262 71 24 chr5 8225357 8225441 -191404709 + MER91B DNA MER1_type 44 131 -59 292 321 12 0 chr5 8225454 8225538 -191404612 + MER91B DNA MER1_type 93 177 -13 4237 129 41 124 chr5 8225944 8226988 -191403162 - L1MC2 LINE L1 -11 6333 5377 2067 108 3 0 chr5 8227735 8228042 -191402108 + AluSx SINE Alu 1 312 0 208 358 42 0 chr5 8228186 8228281 -191401869 + L3 LINE CR1 1459 1557 -20 1870 136 3 3 chr5 8228472 8228766 -191401384 - L1PB1 LINE L1 -1 6150 5857 3957 118 21 4 chr5 8228766 8229491 -191400659 + L1PB1 LINE L1 5117 5853 -298 320 309 73 0 chr5 8229655 8229765 -191400385 + L2 LINE L2 3155 3272 0 224 319 43 76 chr5 8232601 8232786 -191397364 + L3 LINE CR1 597 775 -802 30 45 0 0 chr5 8233632 8233676 -191396474 + AT_rich Low_complexity Low_complexity 1 44 0 2311 61 7 3 chr5 8233864 8234158 -191395992 + AluY SINE Alu 1 295 -16 826 235 90 45 chr5 8234932 8235315 -191394835 - MLT1C LTR MaLR -1 466 12 1755 167 0 3 chr5 8235607 8235900 -191394250 + AluJb SINE Alu 1 292 -20 263 250 114 0 chr5 8236348 8236426 -191393724 + MIR3 SINE MIR 110 200 -8 2245 104 0 0 chr5 8236426 8236735 -191393415 - AluSx SINE Alu -3 309 1 239 282 220 22 chr5 8238186 8238459 -191391691 - L2 LINE L2 -342 2972 2646 2222 110 0 0 chr5 8238480 8238790 -191391360 + AluSx SINE Alu 1 310 -2 852 152 0 0 chr5 8238926 8239058 -191391092 - AluSq/x SINE Alu -181 132 1 1695 147 109 32 chr5 8239225 8239573 -191390577 + THE1C LTR MaLR 1 375 0 300 354 31 36 chr5 8240679 8240871 -191389279 - HAL1b LINE L1 -1052 296 106 2478 44 0 0 chr5 8240904 8241199 -191388951 + AluY SINE Alu 1 295 -16 1733 129 42 18 chr5 8241201 8241487 -191388663 - AluJo SINE Alu -19 293 1 431 133 0 0 chr5 8241579 8241639 -191388511 + 5S rRNA rRNA 31 90 -31 2044 135 0 0 chr5 8241971 8242274 -191387876 - AluSx SINE Alu -9 303 1 403 314 128 33 chr5 8243259 8243680 -191386470 - L1MEd LINE L1 -5198 921 461 240 345 73 0 chr5 8243683 8243848 -191386302 - L1MEd LINE L1 -5939 180 4 1696 151 4 0 chr5 8245583 8245848 -191384302 + AluSx SINE Alu 1 266 -46 246 32 0 0 chr5 8245862 8245893 -191384257 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1981 120 7 14 chr5 8245967 8246259 -191383891 + AluSx SINE Alu 2 291 -21 1854 135 10 13 chr5 8247427 8247731 -191382419 - AluJb SINE Alu -9 303 1 1403 187 73 0 chr5 8248652 8248804 -191381346 - AluJo SINE Alu -19 293 154 207 0 0 0 chr5 8248804 8248827 -191381323 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1403 187 73 0 chr5 8248827 8248947 -191381203 - AluJo SINE Alu -158 154 1 407 232 21 0 chr5 8249258 8249353 -191380797 - MIR SINE MIR -98 164 68 849 40 0 151 chr5 8249447 8249745 -191380405 + L1PA3 LINE L1 5891 6143 -12 1199 40 14 0 chr5 8249858 8250006 -191380144 + L1PA2 LINE L1 6006 6155 0 251 216 0 0 chr5 8250164 8250215 -191379935 + L1M4 LINE L1 3294 3344 -2802 1417 133 12 40 chr5 8250221 8250469 -191379681 - AluJo SINE Alu -14 298 58 529 245 7 19 chr5 8250475 8250630 -191379520 + L1M4 LINE L1 3337 3489 -2657 20552 123 35 27 chr5 8250758 8254232 -191375918 + L1P LINE L1 12 3513 -2633 4503 74 0 0 chr5 8254232 8254798 -191375352 + L1PA7 LINE L1 5586 6152 -2 572 255 11 75 chr5 8254859 8254989 -191375161 + L1ME1 LINE L1 5986 6102 -64 2319 70 3 0 chr5 8254989 8255287 -191374863 - AluSp SINE Alu -14 299 1 572 255 11 75 chr5 8255287 8255344 -191374806 + L1ME1 LINE L1 6102 6161 -5 5081 203 83 11 chr5 8256674 8257055 -191373095 + Cheshire DNA MER1_type 532 884 -1536 1618 171 51 3 chr5 8257055 8257347 -191372803 + AluJb SINE Alu 1 306 -6 5081 203 83 11 chr5 8257347 8258696 -191371454 + Cheshire DNA MER1_type 884 2415 -5 669 134 79 31 chr5 8259990 8260117 -191370033 + FLAM_C SINE Alu 1 133 0 213 290 197 2 chr5 8260412 8260534 -191369616 - MIR SINE MIR -62 146 9 320 250 138 20 chr5 8260652 8260848 -191369302 + L1ME4a LINE L1 5881 6099 -22 973 219 90 68 chr5 8262008 8262328 -191367822 + MER93b LTR ERV1 1 331 -42 1612 124 98 0 chr5 8262328 8262593 -191367557 - AluSq SINE Alu -22 291 1 973 219 90 68 chr5 8262593 8262637 -191367513 + MER93b LTR ERV1 331 373 0 216 198 77 121 chr5 8263833 8263924 -191366226 + L2 LINE L2 3186 3272 0 294 344 118 24 chr5 8265015 8265227 -191364923 - MIR SINE MIR -16 246 15 244 204 0 0 chr5 8265658 8265702 -191364448 - MIR SINE MIR -147 115 72 208 85 0 85 chr5 8266267 8266314 -191363836 + (TTTTTA)n Simple_repeat Simple_repeat 6 48 0 1087 111 0 0 chr5 8266322 8266475 -191363675 - AluSg/x SINE Alu -26 286 134 2115 68 4 4 chr5 8269535 8269840 -191360310 - AluY SINE Alu 0 305 1 1391 129 0 0 chr5 8270137 8270346 -191359804 + AluSg/x SINE Alu 91 299 -13 1541 173 80 26 chr5 8270636 8270988 -191359162 - THE1C LTR MaLR 0 375 5 1858 147 0 7 chr5 8271599 8271892 -191358258 - AluJb SINE Alu -21 291 1 1678 167 17 0 chr5 8272300 8272587 -191357563 - AluSq SINE Alu -21 292 1 309 130 0 0 chr5 8272897 8272943 -191357207 - FLAM SINE Alu -7 126 81 1516 152 110 15 chr5 8274008 8274272 -191355878 + AluSx SINE Alu 5 293 -19 31 0 0 0 chr5 8274304 8274335 -191355815 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 8274515 8274544 -191355606 + AT_rich Low_complexity Low_complexity 1 29 0 300 316 137 16 chr5 8276375 8276565 -191353585 + L3 LINE CR1 626 838 -739 201 74 0 0 chr5 8277590 8277617 -191352533 + (T)n Simple_repeat Simple_repeat 1 27 0 542 255 30 81 chr5 8277725 8277781 -191352369 - MIR SINE MIR 0 262 205 2466 88 3 0 chr5 8277781 8278089 -191352061 - AluSp SINE Alu -4 309 1 542 255 30 81 chr5 8278089 8278267 -191351883 - MIR SINE MIR -57 205 40 2567 57 0 0 chr5 8278889 8279188 -191350962 - AluY SINE Alu -12 299 1 258 32 0 0 chr5 8279282 8279313 -191350837 + (TTA)n Simple_repeat Simple_repeat 1 31 0 23 33 0 0 chr5 8283593 8283623 -191346527 + AT_rich Low_complexity Low_complexity 1 30 0 3331 203 20 16 chr5 8283982 8284716 -191345434 - L1MB3 LINE L1 -10 6173 5437 2450 81 10 0 chr5 8286598 8286906 -191343244 - AluSx SINE Alu -1 311 1 899 248 22 47 chr5 8288554 8288876 -191341274 - L1MB7 LINE L1 -10 6174 5861 22 0 0 0 chr5 8289255 8289277 -191340873 + AT_rich Low_complexity Low_complexity 1 22 0 2197 99 27 10 chr5 8290020 8290314 -191339836 - AluSx SINE Alu -13 299 1 1750 160 0 45 chr5 8290343 8290655 -191339495 + AluJb SINE Alu 1 298 -14 180 346 39 0 chr5 8292591 8292669 -191337481 + MIR SINE MIR 59 139 -123 2559 43 0 7 chr5 8294136 8294437 -191335713 + AluY SINE Alu 1 299 -12 1869 132 11 0 chr5 8294755 8295020 -191335130 + AluSg SINE Alu 28 295 -15 2545 69 3 0 chr5 8297007 8297311 -191332839 - AluY SINE Alu -6 305 1 203 342 37 19 chr5 8298711 8298872 -191331278 - MIR SINE MIR -41 221 58 23 0 0 0 chr5 8301161 8301184 -191328966 + AT_rich Low_complexity Low_complexity 1 23 0 1922 269 124 21 chr5 8301724 8302680 -191327470 - L1MC4 LINE L1 -52 7990 6936 559 282 108 35 chr5 8302770 8303142 -191327008 + HAL1 LINE L1 578 976 -1531 1573 202 136 0 chr5 8303920 8304287 -191325863 - MER47B DNA MER2_type 0 418 2 306 217 79 21 chr5 8304595 8304746 -191325404 + MLT1F LTR MaLR 24 189 -378 2337 204 78 2 chr5 8304762 8305276 -191324874 - MER68 LTR ERV1 0 562 10 429 226 0 39 chr5 8305318 8305420 -191324730 + MLT1F LTR MaLR 314 411 -182 2375 128 0 0 chr5 8305470 8305805 -191324345 - THE1B LTR MaLR 0 364 30 4746 131 69 55 chr5 8305824 8306710 -191323440 - MER49 LTR ERV1 -25 898 1 618 194 45 8 chr5 8306710 8306843 -191323307 + MLT1F LTR MaLR 405 542 0 524 230 11 79 chr5 8306843 8306982 -191323168 + MIR SINE MIR 69 195 -67 4283 71 54 2 chr5 8306982 8307560 -191322590 + LTR14B LTR ERVK 1 608 0 524 230 11 79 chr5 8307560 8307598 -191322552 + MIR SINE MIR 195 234 -28 710 223 127 75 chr5 8308473 8308819 -191321331 - LTR16A LTR ERVL -2 448 85 2514 55 0 23 chr5 8309009 8309319 -191320831 + AluY SINE Alu 1 303 -8 476 316 97 72 chr5 8310407 8310456 -191319694 - L1M4 LINE L1 -2970 3176 3130 2511 64 3 0 chr5 8310456 8310754 -191319396 + AluY SINE Alu 1 299 -12 476 316 97 72 chr5 8310754 8311612 -191318538 - L1M4 LINE L1 -3016 3130 2239 1372 197 100 4 chr5 8311612 8311881 -191318269 - AluJo SINE Alu -17 295 1 476 316 97 72 chr5 8311881 8311964 -191318186 - L1M4 LINE L1 -3907 2239 2160 737 267 45 25 chr5 8313248 8313696 -191316454 + MER76 LTR ERV 1 521 -167 835 233 59 81 chr5 8314099 8314490 -191315660 + MLT1G3 LTR MaLR 172 549 0 4750 184 26 42 chr5 8315899 8316024 -191314126 + L1MB1 LINE L1 4130 4255 -1913 180 0 0 0 chr5 8316024 8316044 -191314106 + (CA)n Simple_repeat Simple_repeat 1 20 0 4750 184 26 42 chr5 8316044 8316233 -191313917 + L1MB1 LINE L1 4255 4446 -1722 2520 69 0 0 chr5 8316233 8316536 -191313614 + AluY SINE Alu 1 303 -8 4750 184 26 42 chr5 8316536 8317133 -191313017 + L1MB1 LINE L1 4446 5051 -1117 1100 95 0 0 chr5 8317133 8317270 -191312880 + AluSc SINE Alu 128 264 -45 4750 184 26 42 chr5 8317270 8318188 -191311962 + L1MB1 LINE L1 5051 5965 -203 2425 126 81 0 chr5 8318188 8318584 -191311566 + MSTC LTR MaLR 1 428 0 4750 184 26 42 chr5 8318584 8318780 -191311370 + L1MB1 LINE L1 5965 6163 -5 1484 259 72 16 chr5 8318778 8319415 -191310735 - L1ME3A LINE L1 -231 5939 5267 * 981 257 55 23 chr5 8319645 8320042 -191310108 - L1ME LINE L1 -499 5671 5262 865 302 107 36 chr5 8320128 8320868 -191309282 - L1ME LINE L1 -1053 5093 4407 2281 96 10 0 chr5 8320868 8321160 -191308990 - AluY SINE Alu -16 295 1 865 302 107 36 chr5 8321160 8321763 -191308387 - L1ME LINE L1 -1739 4407 3613 455 225 47 30 chr5 8321920 8322089 -191308061 + MER5B DNA MER1_type 1 172 -6 1335 107 202 0 chr5 8322500 8322805 -191307345 + L1MA7 LINE L1 5936 6291 0 224 254 45 0 chr5 8323206 8323273 -191306877 + MIR SINE MIR 89 158 -104 1733 182 26 47 chr5 8323497 8323849 -191306301 + L1MB3 LINE L1 5788 6133 -50 2133 109 0 45 chr5 8323849 8324160 -191305990 + AluSx SINE Alu 3 299 -13 1733 182 26 47 chr5 8324160 8324192 -191305958 + L1MB3 LINE L1 6133 6164 -19 198 0 0 0 chr5 8324192 8324214 -191305936 + (TG)n Simple_repeat Simple_repeat 2 23 0 * 288 0 0 0 chr5 8324213 8324245 -191305905 + (TA)n Simple_repeat Simple_repeat 1 32 0 672 254 122 61 chr5 8324273 8324778 -191305372 - MLT1E2 LTR MaLR -52 574 1 403 229 221 0 chr5 8325230 8325370 -191304780 + MER5B DNA MER1_type 7 177 -1 232 279 35 35 chr5 8325580 8325666 -191304484 - L2 LINE L2 -51 3221 3136 243 0 0 0 chr5 8325882 8325909 -191304241 + (TG)n Simple_repeat Simple_repeat 1 27 0 369 252 0 27 chr5 8325928 8326039 -191304111 + L1MC5 LINE L1 7806 7913 -48 2935 78 5 5 chr5 8326098 8326496 -191303654 + MLT2A1 LTR ERVL 3 400 -44 181 160 20 20 chr5 8326569 8326619 -191303531 + (TA)n Simple_repeat Simple_repeat 2 51 0 377 68 14 7 chr5 8326637 8326709 -191303441 + MLT2A2 LTR ERVL 400 453 0 21 57 0 0 chr5 8326715 8326750 -191303400 + AT_rich Low_complexity Low_complexity 1 35 0 429 110 37 0 chr5 8327444 8327526 -191302624 + GA-rich Low_complexity Low_complexity 4 88 0 349 266 65 16 chr5 8327668 8327792 -191302358 - L1 LINE L1 -2945 3201 3072 242 194 28 28 chr5 8327852 8327924 -191302226 + (CCCCG)n Simple_repeat Simple_repeat 5 76 0 21 36 0 0 chr5 8327934 8327962 -191302188 + GC_rich Low_complexity Low_complexity 1 28 0 180 158 0 0 chr5 8327970 8328008 -191302142 + (TCG)n Simple_repeat Simple_repeat 2 39 0 31 0 0 0 chr5 8328071 8328102 -191302048 + GC_rich Low_complexity Low_complexity 1 31 0 31 0 0 0 chr5 8328155 8328186 -191301964 + GC_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr5 8328297 8328333 -191301817 + GC_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr5 8328380 8328414 -191301736 + GC_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr5 8328807 8328837 -191301313 + AT_rich Low_complexity Low_complexity 1 30 0 1327 226 68 43 chr5 8333461 8333984 -191296166 - MLT1E3 LTR MaLR 0 624 18 859 97 0 0 chr5 8334237 8334397 -191295753 + AluSc SINE Alu 168 327 0 198 0 0 0 chr5 8336222 8336244 -191293906 + (T)n Simple_repeat Simple_repeat 1 22 0 909 159 53 0 chr5 8336520 8336690 -191293460 + MER3 DNA MER1_type 1 179 -30 266 326 47 29 chr5 8337064 8337236 -191292914 - MIR SINE MIR -17 245 71 180 286 57 14 chr5 8337756 8337826 -191292324 - MIR SINE MIR -118 144 72 349 296 11 0 chr5 8338570 8338658 -191291492 - MIR SINE MIR -161 101 13 2371 104 0 0 chr5 8338716 8339023 -191291127 + AluY SINE Alu 1 307 -4 268 330 11 11 chr5 8339795 8339889 -191290261 - MIR SINE MIR -4 258 165 207 308 49 56 chr5 8341227 8341370 -191288780 + L2 LINE L2 2921 3062 -251 286 259 12 35 chr5 8341964 8342049 -191288101 - MER117 DNA MER1_type -60 137 55 260 109 18 18 chr5 8342501 8342556 -191287594 - L1ME4a LINE L1 -10 6111 6057 259 288 27 45 chr5 8342873 8342984 -191287166 + MIR SINE MIR 82 190 -72 180 0 0 0 chr5 8344431 8344451 -191285699 + (A)n Simple_repeat Simple_repeat 1 20 0 848 186 12 12 chr5 8345219 8345380 -191284770 - FRAM SINE Alu -5 161 1 196 314 14 43 chr5 8347734 8347804 -191282346 - L2 LINE L2 -10 3303 3236 2243 115 0 16 chr5 8349424 8349737 -191280413 - AluSc SINE Alu -1 308 1 470 281 22 14 chr5 8354502 8354641 -191275509 - MIR SINE MIR -35 227 88 207 250 42 94 chr5 8357156 8357252 -191272898 + MER5A DNA MER1_type 92 182 -7 427 246 108 0 chr5 8359073 8359240 -191270910 + MER3 DNA MER1_type 3 187 -22 207 292 31 62 chr5 8360889 8360985 -191269165 - L2 LINE L2 -1 3271 3179 1506 168 70 16 chr5 8363573 8363942 -191266208 - Charlie5 DNA MER1_type 0 2624 2236 26 50 0 0 chr5 8364540 8364580 -191265570 + AT_rich Low_complexity Low_complexity 1 40 0 2138 145 0 3 chr5 8367932 8368235 -191261915 - AluSx SINE Alu -10 302 1 24 0 0 0 chr5 8370426 8370450 -191259700 + AT_rich Low_complexity Low_complexity 1 24 0 1296 138 0 0 chr5 8371009 8371190 -191258960 + AluSg/x SINE Alu 120 300 -12 2095 113 3 0 chr5 8371470 8371772 -191258378 - AluSx SINE Alu 0 303 1 239 306 74 19 chr5 8373585 8373693 -191256457 - MIR3 SINE MIR -14 194 81 363 221 102 31 chr5 8374459 8374586 -191255564 + MIR SINE MIR 27 162 -46 233 245 0 0 chr5 8374933 8374982 -191255168 + MLT1L LTR MaLR 4 52 -563 525 133 37 3 chr5 8374985 8375121 -191255029 + MER53 DNA DNA 1 184 -5 420 306 137 32 chr5 8375247 8375495 -191254655 + MLT1J LTR MaLR 238 511 0 543 259 57 31 chr5 8376235 8376428 -191253722 - MER5C DNA MER1_type -3 321 124 224 293 60 26 chr5 8376750 8376866 -191253284 - MER5B DNA MER1_type -58 120 1 21 0 0 0 chr5 8377021 8377042 -191253108 + AT_rich Low_complexity Low_complexity 1 21 0 499 312 97 33 chr5 8378783 8378821 -191251329 - L1MC4a LINE L1 -1842 5966 5932 2050 141 10 0 chr5 8378821 8379112 -191251038 - AluSx SINE Alu -18 294 1 499 312 97 33 chr5 8379112 8379435 -191250715 - L1MC4a LINE L1 -1876 5932 5582 469 314 74 95 chr5 8379507 8381382 -191248768 + L1M4 LINE L1 2363 3782 -2364 255 252 16 32 chr5 8381561 8381684 -191248466 + L1M4 LINE L1 3928 4048 -2098 861 136 17 0 chr5 8381723 8381841 -191248309 - AluSq/x SINE Alu -193 120 1 287 265 92 41 chr5 8382029 8382225 -191247925 + L1M4 LINE L1 5176 5381 -765 287 176 305 53 chr5 8382854 8382985 -191247165 + L2 LINE L2 3147 3310 -3 1217 215 168 22 chr5 8384515 8384919 -191245231 - MLT1C LTR MaLR 0 467 5 207 224 41 0 chr5 8385555 8385604 -191244546 + CT-rich Low_complexity Low_complexity 3 53 0 22 35 0 0 chr5 8386698 8386727 -191243423 + GC_rich Low_complexity Low_complexity 1 29 0 222 281 116 33 chr5 8388106 8388227 -191241923 + MIR3 SINE MIR 74 204 -4 1648 191 158 47 chr5 8388236 8388421 -191241729 + LTR44 LTR ERV1 1 164 -355 715 224 18 12 chr5 8388421 8388586 -191241564 - FRAM SINE Alu 0 166 1 1648 191 158 47 chr5 8388586 8388867 -191241283 + LTR44 LTR ERV1 164 519 0 325 316 123 7 chr5 8389153 8389308 -191240842 + L1MC4a LINE L1 5265 5437 -727 711 303 100 20 chr5 8389333 8389683 -191240467 + L1MC4a LINE L1 5517 5894 -1914 2046 141 33 33 chr5 8390282 8390644 -191239506 + THE1B LTR MaLR 3 364 0 1066 188 0 11 chr5 8392418 8392604 -191237546 - AluJb SINE Alu -10 302 119 1726 191 13 34 chr5 8392608 8392978 -191237172 + MLT2C1 LTR ERVL 9 534 -20 190 0 67 0 chr5 8393097 8393127 -191237023 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2583 65 10 0 chr5 8393866 8394174 -191235976 - AluY SINE Alu 0 311 1 2406 97 0 3 chr5 8394176 8394476 -191235674 - AluSg SINE Alu -11 299 1 569 249 74 47 chr5 8394677 8394934 -191235216 - LTR37B LTR ERV1 -64 404 141 510 225 48 37 chr5 8395646 8395833 -191234317 + MER53 DNA DNA 1 189 0 389 232 18 9 chr5 8396061 8396173 -191233977 - MER89 LTR ERV1 0 559 447 660 192 41 7 chr5 8396547 8396693 -191233457 + MER20 DNA MER1_type 3 153 -66 567 236 76 55 chr5 8397141 8397416 -191232734 - MLT2F LTR ERVL -149 514 234 260 299 39 24 chr5 8397450 8397577 -191232573 - MLT2F LTR ERVL -533 130 2 451 111 0 67 chr5 8397836 8397926 -191232224 + FLAM_C SINE Alu 60 143 0 401 210 5 38 chr5 8398013 8398199 -191231951 + CT-rich Low_complexity Low_complexity 1 180 0 1768 166 45 55 chr5 8403117 8403539 -191226611 + Tigger2a DNA MER2_type 6 423 -11 322 323 93 0 chr5 8403704 8403865 -191226285 + MIR3 SINE MIR 20 195 -13 * 345 327 35 0 chr5 8403863 8403976 -191226174 + L2 LINE L2 3196 3312 -1 1132 80 6 6 chr5 8404010 8404185 -191225965 + (TGGA)n Simple_repeat Simple_repeat 3 177 0 286 364 52 19 chr5 8455897 8456166 -191173984 - L2 LINE L2 -2493 821 544 432 189 56 0 chr5 8457208 8457298 -191172852 + L1MA8 LINE L1 6191 6285 -6 21 0 0 0 chr5 8457299 8457320 -191172830 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr5 8457723 8457760 -191172390 + (TC)n Simple_repeat Simple_repeat 2 38 0 324 0 0 0 chr5 8457762 8457798 -191172352 + (TG)n Simple_repeat Simple_repeat 1 36 0 2172 109 3 3 chr5 8458945 8459239 -191170911 - AluSx SINE Alu -18 294 1 304 213 213 0 chr5 8460676 8460784 -191169366 - L2 LINE L2 -220 3052 2922 291 28 0 0 chr5 8461070 8461106 -191169044 + (CA)n Simple_repeat Simple_repeat 2 37 0 1509 209 65 18 chr5 8461121 8461481 -191168669 - MLT2D LTR ERVL -40 424 1 223 245 21 0 chr5 8461952 8462046 -191168104 + (TG)n Simple_repeat Simple_repeat 1 96 0 429 241 18 0 chr5 8462068 8462238 -191167912 + (TG)n Simple_repeat Simple_repeat 1 173 0 238 300 29 0 chr5 8462238 8462308 -191167842 + (CGTG)n Simple_repeat Simple_repeat 1 72 0 587 214 17 6 chr5 8462310 8462488 -191167662 + (TG)n Simple_repeat Simple_repeat 1 180 0 328 216 21 0 chr5 8462514 8462611 -191167539 + (TG)n Simple_repeat Simple_repeat 1 99 0 377 304 53 12 chr5 8463609 8463780 -191166370 + MIR SINE MIR 64 241 -21 1244 226 66 31 chr5 8464052 8464370 -191165780 + MER58B DNA MER1_type 1 329 -12 1263 227 93 41 chr5 8465183 8465623 -191164527 + MLT1C LTR MaLR 1 463 -4 204 214 89 0 chr5 8465656 8465712 -191164438 + L2 LINE L2 3210 3270 -2 338 325 89 10 chr5 8467402 8467605 -191162545 + MIR SINE MIR 16 234 -28 21 36 0 0 chr5 8467832 8467860 -191162290 + AT_rich Low_complexity Low_complexity 1 28 0 391 220 80 0 chr5 8468714 8468814 -191161336 + LTR16C LTR ERVL 380 487 -4 21 36 0 0 chr5 8469151 8469179 -191160971 + AT_rich Low_complexity Low_complexity 1 28 0 240 242 88 22 chr5 8469327 8469418 -191160732 - L1M4c LINE L1 -4667 1717 1621 212 208 0 21 chr5 8471563 8471611 -191158539 + GA-rich Low_complexity Low_complexity 4 50 0 480 316 113 0 chr5 8472466 8472643 -191157507 - MIR SINE MIR -44 218 22 2058 227 69 30 chr5 8474482 8475178 -191154972 + L1ME1 LINE L1 4372 5094 -1052 1894 202 18 27 chr5 8475186 8475763 -191154387 + L1P LINE L1 2856 3620 -2526 3364 79 9 5 chr5 8475763 8476205 -191153945 - MLT2A1 LTR ERVL 0 444 1 1894 202 18 27 chr5 8476205 8476281 -191153869 + L1P LINE L1 3620 3695 -2451 224 30 30 0 chr5 8476263 8476296 -191153854 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 * 1951 104 66 21 chr5 8477093 8477380 -191152770 - AluSq SINE Alu -12 301 2 1610 173 24 64 chr5 8477601 8477976 -191152174 + MLT1A1 LTR MaLR 1 360 -5 2454 68 3 3 chr5 8478159 8478455 -191151695 + AluY SINE Alu 1 296 -15 1163 232 95 34 chr5 8478763 8479015 -191151135 - MLT1C LTR MaLR 0 467 183 2243 106 0 0 chr5 8479015 8479308 -191150842 - AluSc SINE Alu -16 293 1 1163 232 95 34 chr5 8479308 8479435 -191150715 - MLT1C LTR MaLR -284 183 65 1400 123 14 19 chr5 8479573 8479784 -191150366 - THE1B LTR MaLR 0 364 155 1144 140 6 0 chr5 8479784 8479955 -191150195 + AluSc SINE Alu 1 172 -137 234 170 21 0 chr5 8480057 8480104 -191150046 + MER5A DNA MER1_type 81 128 -61 726 274 17 6 chr5 8482748 8482927 -191147223 + MLT1H1 LTR MaLR 1 181 -374 474 283 107 22 chr5 8482995 8483252 -191146898 + MLT1G1 LTR MaLR 190 491 -76 5599 129 32 13 chr5 8484528 8484587 -191145563 + L1PA13 LINE L1 3616 3672 -2491 333 0 0 0 chr5 8484587 8484624 -191145526 + (CA)n Simple_repeat Simple_repeat 2 38 0 5599 129 32 13 chr5 8484624 8487020 -191143130 + L1PA13 LINE L1 3672 6157 -6 720 232 38 64 chr5 8487036 8488017 -191142133 + L1ME1 LINE L1 5083 6043 -123 261 0 0 0 chr5 8488216 8488245 -191141905 + (A)n Simple_repeat Simple_repeat 1 29 0 2429 106 25 11 chr5 8488263 8488622 -191141528 + THE1B LTR MaLR 1 364 0 3671 127 28 55 chr5 8489293 8489971 -191140179 + L1MC1 LINE L1 5674 6333 0 335 194 125 56 chr5 8490772 8490916 -191139234 + L1ME2 LINE L1 5700 5856 -308 906 251 24 0 chr5 8491012 8491223 -191138927 - MIR SINE MIR 0 262 47 845 143 0 19 chr5 8492177 8492331 -191137819 - L1MA5 LINE L1 -6 6294 6144 3761 98 11 4 chr5 8492340 8492881 -191137269 + L1P LINE L1 4186 4730 -1416 206 206 0 0 chr5 8493152 8493186 -191136964 + polypurine Low_complexity Low_complexity 3 36 0 464 265 0 7 chr5 8495054 8495355 -191134795 + (CA)n Simple_repeat Simple_repeat 1 298 0 1072 244 83 77 chr5 8495670 8496166 -191133984 + MLT1F1 LTR MaLR 68 566 -1 1275 141 7 8 chr5 8496478 8496699 -191133451 - MLT2B3 LTR ERVL -195 219 1 1590 231 37 22 chr5 8496703 8497162 -191132988 - MLT1C LTR MaLR -1 466 1 228 275 65 36 chr5 8499373 8499511 -191130639 + L1MC4a LINE L1 5254 5395 -2413 500 251 212 8 chr5 8499627 8499886 -191130264 + L2 LINE L2 2598 2909 -405 226 182 23 0 chr5 8499889 8499933 -191130217 + MLT1G LTR MaLR 1 45 -550 1963 183 42 7 chr5 8499934 8500308 -191129842 + MLT2D LTR ERVL 1 479 -41 225 0 0 0 chr5 8500321 8500346 -191129804 + (TG)n Simple_repeat Simple_repeat 2 26 0 1287 204 31 40 chr5 8500486 8500836 -191129314 + MLT1G LTR MaLR 161 571 0 615 280 69 55 chr5 8500884 8501263 -191128887 + L2 LINE L2 2926 3309 -4 1126 287 30 38 chr5 8501290 8501816 -191128334 + L1MC4a LINE L1 5407 5928 -1880 726 150 92 0 chr5 8502840 8503023 -191127127 + AluSg/x SINE Alu 117 313 0 1130 74 101 0 chr5 8503023 8503172 -191126978 - THE1B LTR MaLR -200 164 1 322 206 98 22 chr5 8503905 8503997 -191126153 - MLT1D LTR MaLR -356 149 51 230 285 156 38 chr5 8505207 8505393 -191124757 + MIR SINE MIR 31 238 -24 628 201 98 24 chr5 8507485 8507649 -191122501 - MER45A DNA AcHobo 0 178 3 5427 106 24 20 chr5 8507941 8507974 -191122176 + L1PA16 LINE L1 5332 5363 -803 1156 59 0 182 chr5 8507974 8508210 -191121940 + 7SK RNA RNA 1 193 0 5427 106 24 20 chr5 8508210 8509007 -191121143 + L1PA16 LINE L1 5363 6165 -1 1864 36 54 0 chr5 8509697 8509921 -191120229 + AluY SINE Alu 2 237 -74 247 49 49 0 chr5 8510195 8510236 -191119914 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 1308 48 0 12 chr5 8510237 8510405 -191119745 - L1PA5 LINE L1 -1 6153 5988 1018 273 217 16 chr5 8513456 8513832 -191116318 + LTR50 LTR ERVL 79 378 -417 2332 51 17 0 chr5 8513832 8514126 -191116024 - L1PA7 LINE L1 -2 6152 5854 1018 273 217 16 chr5 8514126 8514321 -191115829 + LTR50 LTR ERVL 378 765 -30 233 232 146 0 chr5 8514505 8514587 -191115563 - MLT1K LTR MaLR 0 588 495 866 318 75 32 chr5 8514767 8515236 -191114914 - MLT1K LTR MaLR -99 489 1 1214 265 40 11 chr5 8515350 8515697 -191114453 + LTR16B LTR ERVL 108 464 0 13805 148 11 112 chr5 8517430 8520647 -191109503 + L1P LINE L1 12 2904 -3242 2087 259 131 35 chr5 8520752 8521723 -191108427 - HAL1 LINE L1 -307 2200 1137 479 214 5 2 chr5 8522321 8522754 -191107396 + (CA)n Simple_repeat Simple_repeat 1 434 0 196 286 60 24 chr5 8523056 8523140 -191107010 - MIR SINE MIR -31 231 145 16668 112 10 4 chr5 8523362 8526659 -191103491 + L1PA8 LINE L1 2855 6171 -1 30 0 0 0 chr5 8526659 8526689 -191103461 + AT_rich Low_complexity Low_complexity 1 30 0 1391 163 67 15 chr5 8526692 8526850 -191103300 + L1MA10 LINE L1 5986 6134 -200 402 108 0 0 chr5 8526850 8526915 -191103235 + (CCAA)n Simple_repeat Simple_repeat 3 67 0 1391 163 67 15 chr5 8526915 8527087 -191103063 + L1MA10 LINE L1 6134 6333 -1 318 275 92 98 chr5 8528128 8528455 -191101695 - L2 LINE L2 -1366 1948 1624 1601 190 10 13 chr5 8528607 8528907 -191101243 + AluJo SINE Alu 1 299 -13 488 295 80 68 chr5 8530338 8530751 -191099399 - L2 LINE L2 -1268 2046 1629 7586 55 124 8 chr5 8531802 8532848 -191097302 + L1P LINE L1 4 1171 -4975 * 24525 28 0 3 chr5 8532837 8535739 -191094411 + L1P LINE L1 1794 4686 -1460 21 0 0 0 chr5 8538209 8538230 -191091920 + AT_rich Low_complexity Low_complexity 1 21 0 361 278 72 49 chr5 8538842 8539105 -191091045 + L1M4 LINE L1 4562 4830 -1316 326 275 66 44 chr5 8539391 8539573 -191090577 + L1M4 LINE L1 5144 5329 -817 198 174 0 0 chr5 8539696 8539742 -191090408 + (TG)n Simple_repeat Simple_repeat 1 46 0 2200 182 33 12 chr5 8539957 8540381 -191089769 - L1MC1 LINE L1 -2 6331 5899 231 198 238 8 chr5 8541326 8541452 -191088698 - LTR33A LTR ERVL -51 472 318 389 264 31 78 chr5 8544168 8544361 -191085789 - MLT1J2 LTR MaLR 0 450 267 231 105 35 53 chr5 8545026 8545083 -191085067 + T-rich Low_complexity Low_complexity 3 58 0 1248 264 105 28 chr5 8545662 8546158 -191083992 + MER90 LTR ERV1 81 614 0 4922 54 7 3 chr5 8546450 8547027 -191083123 + L1PA5 LINE L1 5571 6149 -5 28 0 0 0 chr5 8547027 8547055 -191083095 + AT_rich Low_complexity Low_complexity 1 28 0 822 243 51 31 chr5 8547739 8548094 -191082056 + L1ME1 LINE L1 2108 2449 -3766 2433 221 56 26 chr5 8548173 8548212 -191081938 + L1ME1 LINE L1 5517 5553 -682 2025 128 0 41 chr5 8548212 8548531 -191081619 + AluSx SINE Alu 1 306 -6 2433 221 56 26 chr5 8548531 8549184 -191080966 + L1ME1 LINE L1 5553 6230 -5 434 319 24 0 chr5 8549831 8550000 -191080150 + MER63A DNA MER1_type 1 173 -37 207 197 13 26 chr5 8550268 8550344 -191079806 + (CATATA)n Simple_repeat Simple_repeat 3 77 0 222 323 38 70 chr5 8551212 8551398 -191078752 + MIR SINE MIR 46 225 -37 366 270 50 0 chr5 8551982 8552082 -191078068 + MIR3 SINE MIR 100 204 -4 22 0 0 0 chr5 8552319 8552341 -191077809 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 8553095 8553117 -191077033 + AT_rich Low_complexity Low_complexity 1 22 0 210 118 0 0 chr5 8553750 8553784 -191076366 + (A)n Simple_repeat Simple_repeat 1 34 0 454 286 112 69 chr5 8553892 8554519 -191075631 + L1M4c LINE L1 1137 2018 -883 1073 153 36 31 chr5 8554744 8554940 -191075210 - MER3 DNA MER1_type 0 209 13 292 241 71 16 chr5 8555085 8555246 -191074904 + L1M4c LINE L1 2480 2698 -3959 424 167 0 0 chr5 8555263 8555335 -191074815 - MER116 DNA Mariner -3 77 6 416 302 72 29 chr5 8555368 8555745 -191074405 + L1M4c LINE L1 2705 3097 -3443 320 299 91 16 chr5 8556801 8556988 -191073162 - L3 LINE CR1 -311 1266 1066 388 253 163 30 chr5 8558484 8558650 -191071500 - MIR SINE MIR -58 204 17 280 366 49 42 chr5 8559186 8559328 -191070822 - L2 LINE L2 -3 3269 3127 501 122 20 10 chr5 8559422 8559520 -191070630 + CT-rich Low_complexity Low_complexity 3 101 0 1579 196 32 0 chr5 8559583 8559863 -191070287 - AluJb SINE Alu -23 289 1 198 0 0 0 chr5 8559905 8559927 -191070223 + (CA)n Simple_repeat Simple_repeat 2 23 0 198 0 0 0 chr5 8559927 8559949 -191070201 + (TG)n Simple_repeat Simple_repeat 2 23 0 1884 176 9 21 chr5 8559954 8560294 -191069856 - MLT2C1 LTR ERVL -61 336 1 231 311 95 0 chr5 8560368 8560442 -191069708 - MER5B DNA MER1_type -6 172 92 1054 270 77 70 chr5 8560490 8561023 -191069127 + Charlie7 DNA MER1_type 2 543 -2069 1465 148 13 4 chr5 8561023 8561252 -191068898 + L1PA13 LINE L1 5914 6144 -19 1054 270 77 70 chr5 8561252 8561432 -191068718 + Charlie7 DNA MER1_type 543 720 -1892 211 109 55 55 chr5 8561496 8561551 -191068599 + (CAATA)n Simple_repeat Simple_repeat 3 57 0 1120 240 59 57 chr5 8561682 8562070 -191068080 - MLT1B LTR MaLR 0 390 2 2419 65 0 0 chr5 8562096 8562390 -191067760 - AluY SINE Alu -17 294 1 526 301 51 20 chr5 8562633 8562829 -191067321 - L2 LINE L2 0 3313 3112 971 334 85 27 chr5 8562956 8563594 -191066556 - L2 LINE L2 -1262 2052 1378 278 167 0 0 chr5 8566290 8566332 -191063818 + 5S rRNA rRNA 1 42 -79 278 167 0 0 chr5 8566435 8566477 -191063673 + 5S rRNA rRNA 1 42 -79 265 167 0 0 chr5 8566525 8566567 -191063583 + 5S rRNA rRNA 1 42 -79 662 169 12 0 chr5 8568271 8568431 -191061719 + (TGGA)n Simple_repeat Simple_repeat 1 162 0 322 204 13 112 chr5 8568949 8569101 -191061049 + HAL1 LINE L1 100 236 -2271 729 269 88 70 chr5 8569198 8569329 -191060821 + HAL1 LINE L1 418 545 -1962 713 259 40 0 chr5 8569329 8569530 -191060620 + MER3 DNA MER1_type 1 209 0 729 269 88 70 chr5 8569530 8569886 -191060264 + HAL1 LINE L1 545 923 -1584 228 35 0 0 chr5 8569886 8569915 -191060235 + (CAA)n Simple_repeat Simple_repeat 2 30 0 729 269 88 70 chr5 8569915 8570121 -191060029 + HAL1 LINE L1 923 1124 -1383 313 319 0 0 chr5 8571029 8571120 -191059030 + MIR SINE MIR 41 131 -77 22 0 0 0 chr5 8571455 8571477 -191058673 + AT_rich Low_complexity Low_complexity 1 22 0 2862 120 31 5 chr5 8571761 8572178 -191057972 - MSTA LTR MaLR 0 428 1 3089 154 27 8 chr5 8572178 8572698 -191057452 - MSTA-int LTR MaLR 0 1651 1122 1913 126 3 85 chr5 8572696 8573061 -191057089 + MSTA-int LTR MaLR 1317 1651 0 * 2707 140 19 19 chr5 8573061 8573489 -191056661 + MSTA LTR MaLR 1 428 0 333 330 30 0 chr5 8573872 8573972 -191056178 - MER5A DNA MER1_type -77 112 10 197 277 21 0 chr5 8574048 8574095 -191056055 + L2 LINE L2 3225 3272 0 322 301 90 9 chr5 8574669 8574785 -191055365 + MIR SINE MIR 43 168 -62 241 300 54 56 chr5 8575048 8575192 -191054958 + MIR SINE MIR 15 156 -64 590 181 123 32 chr5 8575920 8576075 -191054075 + ERVL LTR ERVL 3443 3611 -2153 8315 16 3 0 chr5 8576732 8578178 -191051972 - L1PA2 LINE L1 0 6155 4711 209 108 27 0 chr5 8578324 8578361 -191051789 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 569 274 21 11 chr5 8580104 8580290 -191049860 + MIR SINE MIR 65 252 -10 223 255 0 0 chr5 8580886 8580937 -191049213 + A-rich Low_complexity Low_complexity 2 52 0 1771 177 76 0 chr5 8581468 8581784 -191048366 + MSTB LTR MaLR 87 426 0 436 57 101 6 chr5 8581980 8582138 -191048012 + (TA)n Simple_repeat Simple_repeat 2 174 0 529 248 15 7 chr5 8583695 8583832 -191046318 - LTR41 LTR ERVL -618 155 18 365 262 200 19 chr5 8583873 8584217 -191045933 - L2 LINE L2 -71 3242 2820 499 354 0 0 chr5 8584225 8584400 -191045750 + (TG)n Simple_repeat Simple_repeat 1 175 0 852 257 76 16 chr5 8584617 8584920 -191045230 - L2 LINE L2 -512 2802 2482 293 127 18 0 chr5 8587146 8587201 -191042949 - MSTB1 LTR MaLR 0 432 377 393 154 0 0 chr5 8587201 8587292 -191042858 + (TA)n Simple_repeat Simple_repeat 1 91 0 1831 182 73 0 chr5 8587292 8587633 -191042517 - MSTB1 LTR MaLR -65 367 2 814 103 0 0 chr5 8587795 8587902 -191042248 + AluSg/x SINE Alu 188 294 -15 625 240 62 5 chr5 8588461 8588653 -191041497 - L1MD3 LINE L1 0 7995 7793 228 149 0 43 chr5 8588679 8588726 -191041424 + MLT1L LTR MaLR 567 611 -4 396 178 122 11 chr5 8589894 8589984 -191040166 - MLT1J LTR MaLR 0 511 412 592 258 28 28 chr5 8590176 8590354 -191039796 - MLT1J LTR MaLR -330 181 4 1121 247 160 15 chr5 8590434 8590835 -191039315 - LTR40b LTR ERVL 0 462 4 599 71 12 0 chr5 8592323 8592408 -191037742 - AluY SINE Alu -13 298 213 6833 71 6 3 chr5 8592514 8593700 -191036450 + L1PA8 LINE L1 4972 6166 -6 1859 185 26 4 chr5 8593707 8594077 -191036073 - L1MA5 LINE L1 -153 6147 5777 248 268 0 0 chr5 8594030 8594086 -191036064 + L1M2 LINE L1 5668 5723 -577 * 274 294 56 37 chr5 8594297 8594494 -191035656 - L1ME LINE L1 -480 5690 5487 388 318 71 18 chr5 8595753 8595923 -191034227 - HAL1 LINE L1 -938 1569 1391 5888 168 15 26 chr5 8596048 8598202 -191031948 - L1PB1 LINE L1 -3 6148 4028 21 36 0 0 chr5 8598538 8598566 -191031584 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr5 8600732 8600760 -191029390 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 337 311 34 38 chr5 8601975 8602184 -191027966 + MIR SINE MIR 23 230 -32 260 281 31 70 chr5 8602451 8602579 -191027571 + MER94 DNA DNA 9 131 -3 1672 226 20 6 chr5 8605044 8605394 -191024756 - MER4D LTR ERV1 0 903 549 727 152 23 0 chr5 8605424 8605556 -191024594 - MER49 LTR ERV1 -638 285 151 * 1235 176 23 38 chr5 8605555 8605792 -191024358 - MER49 LTR ERV1 -666 257 23 2029 154 0 0 chr5 8605792 8606097 -191024053 - AluSx SINE Alu -7 305 1 1235 176 23 38 chr5 8606097 8606120 -191024030 - MER49 LTR ERV1 -900 23 1 235 231 0 0 chr5 8606379 8606431 -191023719 + A-rich Low_complexity Low_complexity 4 55 0 2065 144 0 3 chr5 8607932 8608231 -191021919 - AluSx SINE Alu -14 298 1 281 307 33 20 chr5 8608341 8608494 -191021656 + MIR SINE MIR 60 214 -48 1933 142 45 10 chr5 8610108 8610397 -191019753 + AluSx SINE Alu 1 299 -13 523 317 61 15 chr5 8611334 8611596 -191018554 + MLT2E LTR ERVL 31 304 -324 195 42 0 0 chr5 8612040 8612064 -191018086 + (TG)n Simple_repeat Simple_repeat 1 24 0 23 54 0 0 chr5 8613249 8613286 -191016864 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 8613312 8613333 -191016817 + AT_rich Low_complexity Low_complexity 1 21 0 254 208 51 45 chr5 8613343 8613521 -191016629 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 24 0 0 0 chr5 8613521 8613545 -191016605 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 8613709 8613738 -191016412 + AT_rich Low_complexity Low_complexity 1 29 0 651 198 0 0 chr5 8614477 8614603 -191015547 + L1MB4 LINE L1 6038 6163 -17 316 320 8 16 chr5 8615502 8615630 -191014520 - MIR SINE MIR -20 242 116 25 0 0 0 chr5 8615881 8615906 -191014244 + AT_rich Low_complexity Low_complexity 1 25 0 6074 100 18 19 chr5 8615947 8616149 -191014001 - L1PA14 LINE L1 -11 6150 5949 1786 161 14 3 chr5 8616149 8616440 -191013710 - AluSx SINE Alu -18 294 1 6074 100 18 19 chr5 8616440 8617789 -191012361 - L1PA14 LINE L1 -212 5949 4603 1492 163 30 22 chr5 8617789 8618059 -191012091 - THE1C LTR MaLR -103 272 1 28 48 0 0 chr5 8618059 8618101 -191012049 + AT_rich Low_complexity Low_complexity 1 42 0 1682 160 65 0 chr5 8619438 8619713 -191010437 + AluSx SINE Alu 1 293 -19 768 210 28 23 chr5 8620401 8620577 -191009573 + MER45A DNA AcHobo 2 178 0 259 208 44 30 chr5 8621893 8622011 -191008139 + MLT1G1 LTR MaLR 319 409 0 1588 192 35 24 chr5 8623301 8623640 -191006510 - MER61A LTR ERV1 0 343 1 250 314 38 0 chr5 8624462 8624567 -191005583 + L1ME LINE L1 5576 5684 -437 1655 148 3 48 chr5 8624822 8625112 -191005038 - AluSx SINE Alu -5 307 31 405 140 18 9 chr5 8625150 8625264 -191004886 + (TA)n Simple_repeat Simple_repeat 2 116 0 844 177 89 58 chr5 8625314 8625574 -191004576 + MLT1E2 LTR MaLR 71 332 -322 1430 139 57 16 chr5 8625574 8625818 -191004332 + MER74A LTR ERVL 1 254 -304 699 201 67 18 chr5 8625818 8625982 -191004168 - LOR1b LTR ERV1 0 461 290 511 202 219 43 chr5 8626117 8626350 -191003800 - LOR1b LTR ERV1 -109 352 79 1106 206 66 8 chr5 8626377 8626634 -191003516 + MER74A LTR ERVL 250 521 -37 1337 251 29 0 chr5 8626715 8627022 -191003128 + MLT1E2 LTR MaLR 311 626 0 303 93 0 0 chr5 8627027 8627070 -191003080 + (ATG)n Simple_repeat Simple_repeat 2 44 0 2461 116 29 0 chr5 8628955 8629299 -191000851 + L1PB3 LINE L1 5800 6153 -1 757 276 61 0 chr5 8629513 8629827 -191000323 + L2 LINE L2 2779 3114 -199 248 258 159 71 chr5 8629997 8630179 -190999971 + L2 LINE L2 3102 3299 -14 201 282 60 60 chr5 8630196 8630313 -190999837 - L2 LINE L2 -247 3025 2909 1183 226 66 84 chr5 8630471 8630965 -190999185 + MLT1J LTR MaLR 1 485 -26 765 188 60 0 chr5 8630965 8631114 -190999036 - MER90 LTR ERV1 0 575 418 301 349 122 4 chr5 8632059 8632314 -190997836 - L2 LINE L2 -160 3112 2828 934 177 24 17 chr5 8632513 8632710 -190997440 + MSTA LTR MaLR 139 428 0 21 0 0 0 chr5 8633422 8633443 -190996707 + AT_rich Low_complexity Low_complexity 1 21 0 1809 214 59 0 chr5 8634043 8634449 -190995701 + L1MD3 LINE L1 7547 7976 -19 2066 112 137 3 chr5 8634712 8635034 -190995116 + MLT2A2 LTR ERVL 1 365 -88 1228 102 10 56 chr5 8635036 8635233 -190994917 + THE1B LTR MaLR 177 364 0 1323 206 155 35 chr5 8635308 8635741 -190994409 + MLT1D LTR MaLR 1 485 -20 1072 263 89 9 chr5 8636213 8636551 -190993599 - MLT1A1 LTR MaLR 0 365 1 478 236 73 55 chr5 8637113 8637333 -190992817 - LTR67 LTR ERVL -266 291 68 257 209 0 0 chr5 8637373 8637416 -190992734 + polypurine Low_complexity Low_complexity 3 45 0 2166 94 0 13 chr5 8637460 8637758 -190992392 - AluSq SINE Alu -19 294 1 29 28 0 0 chr5 8638266 8638302 -190991848 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 8638529 8638551 -190991599 + AT_rich Low_complexity Low_complexity 1 22 0 2013 133 3 3 chr5 8638832 8639133 -190991017 + AluSx SINE Alu 1 301 -11 24 32 0 0 chr5 8639171 8639202 -190990948 + AT_rich Low_complexity Low_complexity 1 31 0 3049 181 160 96 chr5 8639254 8639542 -190990608 + L1MC3 LINE L1 6714 6982 -803 225 65 0 0 chr5 8639542 8639573 -190990577 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 3049 181 160 96 chr5 8639573 8639629 -190990521 + L1MC3 LINE L1 6982 7033 -752 282 286 0 0 chr5 8639629 8639706 -190990444 + MLT1F1 LTR MaLR 35 111 -456 3049 181 160 96 chr5 8639706 8640274 -190989876 + L1MC3 LINE L1 7033 7766 -19 381 185 60 7 chr5 8640290 8640441 -190989709 + (TA)n Simple_repeat Simple_repeat 1 159 0 203 188 45 8 chr5 8640452 8640585 -190989565 + (TA)n Simple_repeat Simple_repeat 2 139 0 375 315 126 49 chr5 8640755 8641406 -190988744 + L1M4 LINE L1 3716 4416 -1730 1652 144 26 58 chr5 8641692 8642073 -190988077 - L1PA13 LINE L1 -1 6162 5794 21 57 0 0 chr5 8642536 8642571 -190987579 + AT_rich Low_complexity Low_complexity 1 35 0 18916 100 11 31 chr5 8642589 8645344 -190984806 + Charlie3 DNA MER1_type 1 2700 -10 269 267 6 0 chr5 8645419 8645595 -190984555 + (CA)n Simple_repeat Simple_repeat 1 177 0 439 311 0 16 chr5 8645633 8645816 -190984334 + (CA)n Simple_repeat Simple_repeat 1 180 0 312 281 0 0 chr5 8645852 8646030 -190984120 + (CA)n Simple_repeat Simple_repeat 2 179 0 2113 128 67 21 chr5 8746507 8746882 -190883268 - LTR7 LTR ERV1 -58 392 1 2094 82 7 23 chr5 8746882 8747186 -190882964 - HERVH LTR ERV1 0 7713 7415 2811 98 2 62 chr5 8747186 8747636 -190882514 - HERVH LTR ERV1 -134 7579 7157 347 235 49 0 chr5 8747606 8747687 -190882463 - HERVH LTR ERV1 -1670 6043 5959 * 4757 27 0 0 chr5 8747692 8748255 -190881895 - L1PA4 LINE L1 -750 5396 4834 6665 30 3 3 chr5 8748255 8749023 -190881127 + L1PA4 LINE L1 5377 6154 -1 1555 78 46 1 chr5 8749024 8749369 -190880781 + L1P3 LINE L1 5107 5465 -707 34338 116 10 27 chr5 8749469 8755196 -190874954 - HERVH LTR ERV1 -1766 5947 1 2248 137 108 7 chr5 8755196 8755605 -190874545 - LTR7 LTR ERV1 0 450 1 2100 138 3 0 chr5 8756256 8756554 -190873596 - AluSx SINE Alu -13 299 1 1759 62 0 0 chr5 8756678 8756887 -190873263 - AluY SINE Alu -14 297 89 302 229 0 0 chr5 8758563 8758624 -190871526 - MLT1I LTR MaLR -1 408 348 223 354 24 24 chr5 8759549 8759676 -190870474 + MER5A DNA MER1_type 38 164 -25 309 344 16 21 chr5 8759747 8759939 -190870211 + L2 LINE L2 2458 2648 -666 417 302 34 6 chr5 8760094 8760273 -190869877 + MER20 DNA MER1_type 36 219 0 236 310 23 0 chr5 8760437 8760524 -190869626 + MLT1I LTR MaLR 317 405 -4 2478 78 5 111 chr5 8760550 8760972 -190869178 - MER51B LTR ERV1 0 377 1 1528 181 44 17 chr5 8763313 8763677 -190866473 - AluSq SINE Alu 0 372 1 206 322 91 13 chr5 8764724 8764850 -190865300 - MIR SINE MIR -75 133 2 383 210 23 0 chr5 8765608 8765784 -190864366 + (CA)n Simple_repeat Simple_repeat 1 180 0 1840 116 81 18 chr5 8765842 8766157 -190863993 + AluSg SINE Alu 1 310 0 22 35 0 0 chr5 8766753 8766782 -190863368 + AT_rich Low_complexity Low_complexity 1 29 0 318 26 0 0 chr5 8767165 8767204 -190862946 + (CA)n Simple_repeat Simple_repeat 1 39 0 402 244 111 7 chr5 8767572 8767707 -190862443 + L2 LINE L2 3122 3270 -2 251 211 39 23 chr5 8768455 8768583 -190861567 + (TTATA)n Simple_repeat Simple_repeat 4 133 0 * 367 195 35 41 chr5 8768505 8768674 -190861476 + (TA)n Simple_repeat Simple_repeat 1 168 0 22 80 0 0 chr5 8768720 8768770 -190861380 + AT_rich Low_complexity Low_complexity 1 50 0 333 0 0 0 chr5 8771918 8771955 -190858195 + (TG)n Simple_repeat Simple_repeat 2 38 0 21 57 0 0 chr5 8772406 8772441 -190857709 + AT_rich Low_complexity Low_complexity 1 35 0 216 0 0 0 chr5 8772818 8772842 -190857308 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 578 191 36 0 chr5 8773967 8774077 -190856073 - L1MB5 LINE L1 -37 6137 6024 383 83 33 0 chr5 8774064 8774124 -190856026 + L1MD3 LINE L1 7921 7982 -13 * 406 298 107 28 chr5 8775114 8775433 -190854717 - L2 LINE L2 -49 3264 2921 6241 31 19 3 chr5 8775807 8776549 -190853601 - L1PA4 LINE L1 0 6155 5402 4710 46 0 1 chr5 8776545 8777144 -190853006 + L1P LINE L1 4830 5424 -741 * 228 139 0 0 chr5 8777951 8777987 -190852163 + MER51A LTR ERV1 1 36 -598 * 967 184 162 5 chr5 8777976 8778236 -190851914 + MER51A LTR ERV1 334 629 -11 194 287 250 0 chr5 8778276 8778384 -190851766 - L2 LINE L2 0 3272 3138 305 171 29 0 chr5 8779123 8779193 -190850957 - L1PA16 LINE L1 0 6166 6095 5265 168 95 23 chr5 8779193 8780136 -190850014 + LTR28 LTR ERV1 1 1011 -9 998 163 0 77 chr5 8780147 8780283 -190849867 - L1PA16 LINE L1 -71 6095 5979 2375 100 0 0 chr5 8780283 8780582 -190849568 - AluSq SINE Alu -14 299 1 998 163 0 77 chr5 8780582 8780654 -190849496 - L1PA16 LINE L1 -187 5979 5903 225 65 0 0 chr5 8781814 8781845 -190848305 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 188 273 18 0 chr5 8781870 8781925 -190848225 - L2 LINE L2 -31 3282 3227 349 307 116 32 chr5 8781996 8782185 -190847965 - L2 LINE L2 -209 3104 2900 1359 134 0 15 chr5 8782370 8782572 -190847578 - AluSq SINE Alu -12 301 103 40 0 0 0 chr5 8782615 8782655 -190847495 + AT_rich Low_complexity Low_complexity 1 40 0 952 207 49 0 chr5 8782662 8782865 -190847285 - MER58A DNA MER1_type 0 224 12 24 0 0 0 chr5 8783075 8783099 -190847051 + AT_rich Low_complexity Low_complexity 1 24 0 292 362 48 29 chr5 8783304 8783514 -190846636 - L2 LINE L2 -526 2788 2575 214 179 0 0 chr5 8783558 8783597 -190846553 - L2 LINE L2 -866 2448 2410 318 234 65 32 chr5 8783846 8783970 -190846180 - MLT1J LTR MaLR -327 184 57 246 292 14 0 chr5 8784013 8784085 -190846065 - L2 LINE L2 -997 2317 2245 318 257 14 42 chr5 8784826 8784970 -190845180 - LTR52 LTR ERVL -271 150 11 563 321 16 25 chr5 8785106 8785323 -190844827 + MIR SINE MIR 16 231 -31 29 0 0 0 chr5 8787130 8787159 -190842991 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 8787355 8787383 -190842767 + AT_rich Low_complexity Low_complexity 1 28 0 403 188 72 58 chr5 8788196 8788334 -190841816 + L1MD2 LINE L1 6013 6152 -207 358 269 6 12 chr5 8788336 8788681 -190841469 + (CA)n Simple_repeat Simple_repeat 1 343 0 382 280 119 88 chr5 8792932 8793386 -190836764 + HAL1b LINE L1 220 687 -661 22 0 0 0 chr5 8793457 8793479 -190836671 + AT_rich Low_complexity Low_complexity 1 22 0 287 331 142 0 chr5 8794313 8794440 -190835710 - L2 LINE L2 0 3272 3128 596 289 5 32 chr5 8794507 8794694 -190835456 + MIR SINE MIR 71 252 -10 622 208 69 25 chr5 8794710 8794869 -190835281 + FRAM SINE Alu 1 166 0 210 339 169 0 chr5 8795582 8795706 -190834444 - L2 LINE L2 0 3272 3128 643 275 5 37 chr5 8795772 8795961 -190834189 + MIR SINE MIR 71 253 -9 706 216 49 25 chr5 8795975 8796137 -190834013 + FRAM SINE Alu 1 166 0 194 227 0 107 chr5 8796278 8796353 -190833797 - L2 LINE L2 0 3313 3247 729 175 15 0 chr5 8796575 8796712 -190833438 - MLT1F LTR MaLR 0 542 404 21 82 0 0 chr5 8797667 8797716 -190832434 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr5 8797793 8797815 -190832335 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 8798007 8798037 -190832113 + AT_rich Low_complexity Low_complexity 1 30 0 3453 127 7 39 chr5 8798427 8798970 -190831180 - MER1A DNA MER1_type 0 527 2 1833 54 50 8 chr5 8799534 8799795 -190830355 - L1P3 LINE L1 -400 5754 5483 * 2358 83 0 0 chr5 8799789 8800127 -190830023 + L1P LINE L1 4773 5110 -1036 3271 31 2 5 chr5 8800129 8800550 -190829600 - L1PA4 LINE L1 -453 5702 5283 3469 32 11 5 chr5 8800550 8800981 -190829169 + L1PA4 LINE L1 5719 6154 -1 902 77 97 5 chr5 8800982 8801178 -190828972 + L1P LINE L1 5107 5320 -826 2742 27 25 0 chr5 8801280 8801648 -190828502 - L1P2 LINE L1 -495 5659 5283 3544 34 5 5 chr5 8801648 8802082 -190828068 + L1PA4 LINE L1 5719 6154 -1 1837 72 13 4 chr5 8802082 8802458 -190827692 + L1P3 LINE L1 5105 5483 -689 22 0 0 0 chr5 8803198 8803220 -190826930 + AT_rich Low_complexity Low_complexity 1 22 0 199 325 94 26 chr5 8804315 8804432 -190825718 - MIR SINE MIR -6 256 132 1474 114 42 4 chr5 8804442 8804706 -190825444 + L1MC1 LINE L1 5649 5922 -411 1374 199 55 19 chr5 8804718 8805015 -190825135 + MLT1A1 LTR MaLR 31 341 -24 2200 172 39 9 chr5 8805015 8805446 -190824704 + L1MC1 LINE L1 5881 6324 -9 1374 199 55 19 chr5 8805446 8805460 -190824690 + MLT1A1 LTR MaLR 341 353 -12 2692 13 0 10 chr5 8806331 8806635 -190823515 - AluYa5 SINE Alu -10 301 1 342 321 132 6 chr5 8807033 8807192 -190822958 + L2 LINE L2 3125 3303 -10 234 0 0 0 chr5 8807279 8807305 -190822845 + (CA)n Simple_repeat Simple_repeat 2 27 0 761 64 27 0 chr5 8807434 8807544 -190822606 + (TATTG)n Simple_repeat Simple_repeat 1 113 0 2306 157 14 5 chr5 8807546 8807960 -190822190 - L1MB1 LINE L1 -11 6157 5740 782 188 19 19 chr5 8808255 8808415 -190821735 - L1PB4 LINE L1 -1 6155 5996 321 217 0 0 chr5 8808441 8808510 -190821640 - L1PB4 LINE L1 -90 6066 5998 316 212 0 0 chr5 8808541 8808607 -190821543 - L1PB4 LINE L1 -93 6063 5998 539 228 127 6 chr5 8808635 8808793 -190821357 - L1PB4 LINE L1 -90 6066 5890 291 191 0 0 chr5 8808968 8809031 -190821119 + (TG)n Simple_repeat Simple_repeat 2 64 0 4436 123 3 1 chr5 8810882 8811538 -190818612 - L1PA15 LINE L1 -13 6152 5496 277 297 40 0 chr5 8811577 8811678 -190818472 - L1M4 LINE L1 -1534 4612 4508 796 282 173 19 chr5 8811697 8812020 -190818130 + L2 LINE L2 2158 2530 -784 1180 152 5 10 chr5 8812030 8812234 -190817916 + MLT1A1 LTR MaLR 1 203 -162 185 0 40 0 chr5 8812240 8812265 -190817885 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 618 167 0 0 chr5 8813093 8813213 -190816937 - L1MA7 LINE L1 0 6291 6172 619 230 158 10 chr5 8813358 8813567 -190816583 + MLT1H LTR MaLR 79 318 -231 545 176 104 40 chr5 8813609 8813734 -190816416 + MLT1H LTR MaLR 402 534 -15 406 326 0 20 chr5 8813800 8813996 -190816154 - L1ME LINE L1 -418 5703 5512 615 273 76 52 chr5 8814719 8815339 -190814811 + L1M4 LINE L1 3784 4433 -1713 1078 194 64 67 chr5 8815339 8815684 -190814466 - MER2 DNA MER2_type 0 344 1 615 273 76 52 chr5 8815684 8815940 -190814210 + L1M4 LINE L1 4433 4681 -1465 1059 196 63 72 chr5 8816282 8816629 -190813521 - MER2 DNA MER2_type 0 344 1 325 273 56 39 chr5 8816629 8816915 -190813235 + L1ME3A LINE L1 4411 4701 -1445 286 256 12 12 chr5 8816941 8817023 -190813127 + L1ME3A LINE L1 5831 5912 -258 1148 215 64 82 chr5 8817274 8817740 -190812410 - MLT1C LTR MaLR -7 460 3 233 263 92 26 chr5 8817774 8817850 -190812300 + MIR SINE MIR 64 144 -118 5238 129 29 4 chr5 8817953 8819213 -190810937 - L1PA16 LINE L1 -4 6162 4877 746 175 138 3 chr5 8819550 8819731 -190810419 - MLT1J LTR MaLR -46 459 228 21 0 0 0 chr5 8820567 8820588 -190809562 + AT_rich Low_complexity Low_complexity 1 21 0 40122 39 24 2 chr5 8820611 8826630 -190803520 - L1PA3 LINE L1 0 6155 2 192 158 0 0 chr5 8827918 8827956 -190802194 + A-rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr5 8828097 8828125 -190802025 + AT_rich Low_complexity Low_complexity 1 28 0 479 323 108 53 chr5 8828648 8829063 -190801087 - L1MC4a LINE L1 -1980 5828 5391 267 206 0 14 chr5 8829082 8829155 -190800995 - L1MC4a LINE L1 -821 5345 5274 2192 121 3 0 chr5 8829427 8829734 -190800416 - AluSq SINE Alu -5 308 1 1082 221 103 29 chr5 8830047 8830395 -190799755 + MLT1A2 LTR MaLR 1 467 0 240 326 20 31 chr5 8830424 8830522 -190799628 + L3b LINE CR1 1328 1424 -159 1770 181 79 65 chr5 8832489 8832914 -190797236 - MER67D LTR ERV1 0 514 79 2242 119 48 20 chr5 8832914 8833268 -190796882 - THE1B LTR MaLR 0 364 1 1770 181 79 65 chr5 8833268 8833349 -190796801 - MER67D LTR ERV1 -435 79 1 833 241 20 24 chr5 8834369 8834622 -190795528 - MLT1J LTR MaLR -259 252 1 342 206 0 72 chr5 8834698 8834795 -190795355 + L1MC4 LINE L1 6614 6703 -1339 229 85 0 43 chr5 8834800 8834847 -190795303 + (TA)n Simple_repeat Simple_repeat 2 46 0 243 0 0 0 chr5 8834847 8834874 -190795276 + (CA)n Simple_repeat Simple_repeat 2 28 0 485 205 26 96 chr5 8834997 8835153 -190794997 - MIR SINE MIR -2 260 116 391 164 273 0 chr5 8836368 8836478 -190793672 - MER67D LTR ERV1 -5 509 370 243 0 0 0 chr5 8836480 8836507 -190793643 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2177 19 8 0 chr5 8836537 8836796 -190793354 - L1PA2 LINE L1 0 6155 5895 287 28 0 0 chr5 8836796 8836832 -190793318 + L1PA7 LINE L1 5738 5773 -382 1511 97 4 26 chr5 8836962 8837190 -190792960 + L1PA7 LINE L1 5930 6152 -2 458 222 0 8 chr5 8837218 8837335 -190792815 + (TATATG)n Simple_repeat Simple_repeat 3 118 0 1143 78 6 20 chr5 8838820 8838869 -190791281 + L1PA4 LINE L1 5702 5750 -405 2178 27 0 0 chr5 8838869 8839126 -190791024 - L1PA4 LINE L1 -4 6151 5895 1143 78 6 20 chr5 8839126 8839270 -190790880 + L1PA4 LINE L1 5750 5882 -273 1397 276 50 32 chr5 8839514 8840209 -190789941 + L1MC4 LINE L1 7039 7746 -296 720 40 40 10 chr5 8840209 8840309 -190789841 - MER11A LTR ERVK -14 1252 1150 317 217 58 132 chr5 8840338 8840633 -190789517 + L1MC4 LINE L1 7763 8035 -7 215 324 88 29 chr5 8840641 8840777 -190789373 - MIR3 SINE MIR -31 177 34 510 266 56 0 chr5 8841490 8841633 -190788517 + MIR SINE MIR 5 155 -107 1100 173 16 8 chr5 8843553 8843796 -190786354 - L1MA8 LINE L1 -234 6057 5813 544 270 0 0 chr5 8845096 8845207 -190784943 - FLAM_A SINE Alu -30 112 2 270 221 176 0 chr5 8845254 8845322 -190784828 - MIR SINE MIR -115 147 68 360 245 11 0 chr5 8845610 8845704 -190784446 - MIR SINE MIR 0 262 168 533 115 10 0 chr5 8845711 8845815 -190784335 - HSMAR2 DNA Mariner -1 1301 1197 1301 155 14 9 chr5 8845822 8846035 -190784115 - AluJo SINE Alu -24 288 75 742 131 5 5 chr5 8846035 8846223 -190783927 - HSMAR2 DNA Mariner -94 1208 918 3348 78 36 0 chr5 8896226 8896699 -190733451 + THE1A-int LTR MaLR 1091 1580 0 2228 90 11 74 chr5 8896701 8897078 -190733072 + THE1A LTR MaLR 3 355 0 1708 219 56 16 chr5 8897183 8897631 -190732519 + MLT1C LTR MaLR 1 466 -1 2350 81 0 0 chr5 8897722 8898019 -190732131 - AluY SINE Alu -12 299 3 205 220 121 33 chr5 8898319 8898410 -190731740 + MIR SINE MIR 132 230 -32 856 278 16 20 chr5 8898937 8899189 -190730961 + MIR SINE MIR 12 262 0 2158 115 0 7 chr5 8899265 8899586 -190730564 + AluSx SINE Alu 1 319 0 215 247 146 34 chr5 8900106 8900195 -190729955 - MIR SINE MIR -7 255 157 22 35 0 0 chr5 8901979 8902008 -190728142 + AT_rich Low_complexity Low_complexity 1 29 0 15498 129 19 32 chr5 8902039 8904803 -190725347 + Tigger4(Zombi) DNA MER2_type 1 2726 -5 21 0 0 0 chr5 8905551 8905572 -190724578 + AT_rich Low_complexity Low_complexity 1 21 0 489 143 44 15 chr5 8906361 8906704 -190723446 + (TAGA)n Simple_repeat Simple_repeat 1 353 0 1519 233 69 2 chr5 8906705 8907112 -190723038 - MLT2B1 LTR ERVL -56 464 31 21 0 0 0 chr5 8908014 8908035 -190722115 + AT_rich Low_complexity Low_complexity 1 21 0 182 286 0 0 chr5 8908607 8908642 -190721508 - L2 LINE L2 -94 3178 3144 1549 206 125 20 chr5 8908683 8909140 -190721010 + MLT1D LTR MaLR 1 505 0 1036 190 156 50 chr5 8909216 8909574 -190720576 - MSTD LTR MaLR 0 396 1 189 281 74 44 chr5 8909781 8909896 -190720254 - MIR SINE MIR -69 139 63 1071 268 17 0 chr5 8909995 8910286 -190719864 + LTR16A LTR ERVL 155 450 0 2647 188 39 26 chr5 8911976 8912009 -190718141 + L1MB8 LINE L1 5298 5329 -849 1947 144 32 32 chr5 8912009 8912384 -190717766 - THE1C LTR MaLR 0 375 1 2647 188 39 26 chr5 8912384 8913003 -190717147 + L1MB8 LINE L1 5329 5967 -211 314 161 46 146 chr5 8913429 8913595 -190716555 - L1P4 LINE L1 -314 5860 5711 302 183 0 14 chr5 8913588 8913659 -190716491 + L1MA9 LINE L1 6090 6159 -153 * 235 94 62 62 chr5 8913676 8913740 -190716410 + L1MA9 LINE L1 6239 6302 -10 245 155 12 119 chr5 8914047 8914131 -190716019 + L1MB7 LINE L1 5933 6007 -171 2291 128 14 8 chr5 8914858 8915211 -190714939 + THE1A LTR MaLR 1 355 0 689 51 31 0 chr5 8915211 8915309 -190714841 + THE1A-int LTR MaLR 1 101 -1479 24 0 0 0 chr5 8916338 8916362 -190713788 + AT_rich Low_complexity Low_complexity 1 24 0 4706 205 30 29 chr5 8916892 8918190 -190711960 - L1MD2 LINE L1 -1 6358 5058 207 0 0 0 chr5 8918190 8918213 -190711937 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4706 205 30 29 chr5 8918213 8918478 -190711672 - L1MD2 LINE L1 -1301 5058 4795 3021 147 30 63 chr5 8918616 8919249 -190710901 + LTR9 LTR ERV1 1 612 0 268 250 9 9 chr5 8919271 8919379 -190710771 + (CATATA)n Simple_repeat Simple_repeat 5 112 0 1730 185 3 10 chr5 8919486 8919784 -190710366 + AluJb SINE Alu 1 296 -16 231 125 0 0 chr5 8920519 8920559 -190709591 + (GA)n Simple_repeat Simple_repeat 1 40 0 1380 195 24 7 chr5 8921413 8921700 -190708450 - L1MC1 LINE L1 -6 6327 6036 2123 139 15 22 chr5 8921729 8922133 -190708017 - L1MC1 LINE L1 -276 6057 5657 3522 116 10 48 chr5 8922133 8922756 -190707394 - LTR14B LTR ERVK 0 608 10 2599 193 16 10 chr5 8922756 8923692 -190706458 - L1MC1 LINE L1 -677 5656 4713 2093 144 0 7 chr5 8923692 8923997 -190706153 - AluSc SINE Alu -6 303 1 2599 193 16 10 chr5 8923997 8924082 -190706068 - L1MC1 LINE L1 -1620 4713 4630 372 291 51 17 chr5 8924186 8924303 -190705847 + MER5C DNA MER1_type 4 124 -200 280 87 0 0 chr5 8924329 8924375 -190705775 + MER5C DNA MER1_type 233 278 -46 635 183 23 11 chr5 8925852 8926027 -190704123 + GA-rich Low_complexity Low_complexity 3 179 0 890 193 23 6 chr5 8926071 8926242 -190703908 - MER2 DNA MER2_type -171 174 1 980 156 92 29 chr5 8928367 8928605 -190701545 + MLT1D LTR MaLR 253 505 0 424 241 40 125 chr5 8928755 8929107 -190701043 + MLT1K LTR MaLR 151 472 -116 218 193 35 35 chr5 8929559 8929616 -190700534 - MIR SINE MIR -101 161 105 2754 238 36 13 chr5 8931034 8931829 -190698321 - L1ME2 LINE L1 -9 6155 5342 855 121 0 13 chr5 8931829 8931978 -190698172 + MER4A LTR ERV1 1 147 -517 1604 108 62 22 chr5 8932004 8932345 -190697805 + MER4A LTR ERV1 252 664 0 1229 246 59 60 chr5 8932345 8932949 -190697201 - L1ME2 LINE L1 -801 5345 4741 2345 75 0 16 chr5 8932949 8933257 -190696893 + AluY SINE Alu 9 311 0 1229 246 59 60 chr5 8933257 8933397 -190696753 - L1ME2 LINE L1 -1405 4741 4602 1971 208 27 0 chr5 8933580 8934055 -190696095 + Charlie1 DNA MER1_type 2207 2694 -67 2353 151 89 5 chr5 8935340 8935731 -190694419 + MSTB LTR MaLR 3 426 0 188 368 11 0 chr5 8936619 8936706 -190693444 - L2 LINE L2 -5 3308 3221 273 135 0 0 chr5 8936844 8936896 -190693254 + (CCA)n Simple_repeat Simple_repeat 1 52 0 1980 89 63 7 chr5 8937214 8937483 -190692667 + AluSc SINE Alu 1 284 -25 24 53 0 0 chr5 8938696 8938734 -190691416 + AT_rich Low_complexity Low_complexity 1 38 0 2554 43 7 7 chr5 8938824 8939127 -190691023 - AluY SINE Alu -8 303 1 230 79 0 26 chr5 8939996 8940034 -190690116 + (TTTC)n Simple_repeat Simple_repeat 3 39 0 194 335 57 10 chr5 8940382 8940495 -190689655 - MIR SINE MIR -82 126 6 692 241 22 0 chr5 8943135 8943272 -190686878 - AluJo SINE Alu -171 141 2 22 56 0 0 chr5 8943456 8943492 -190686658 + AT_rich Low_complexity Low_complexity 1 36 0 2410 246 104 15 chr5 8943618 8944672 -190685478 - L1ME2 LINE L1 -40 6518 5373 558 295 80 20 chr5 8944677 8945088 -190685062 - L1ME2 LINE L1 -3706 2834 2401 713 246 108 38 chr5 8945206 8945491 -190684659 - L1ME2 LINE L1 -4292 2429 2165 1844 160 7 0 chr5 8945491 8945791 -190684359 - AluSx SINE Alu -5 307 6 713 246 108 38 chr5 8945791 8945978 -190684172 - L1ME2 LINE L1 -4556 2165 1874 21 0 0 0 chr5 8946110 8946131 -190684019 + AT_rich Low_complexity Low_complexity 1 21 0 415 238 113 61 chr5 8947578 8947809 -190682341 + MLT1L LTR MaLR 8 250 -365 33 0 0 0 chr5 8949005 8949038 -190681112 + AT_rich Low_complexity Low_complexity 1 33 0 189 49 24 49 chr5 8949143 8949184 -190680966 + (TAA)n Simple_repeat Simple_repeat 2 41 0 190 106 43 0 chr5 8949219 8949266 -190680884 + (TA)n Simple_repeat Simple_repeat 2 50 0 268 188 27 20 chr5 8949324 8949473 -190680677 + (TA)n Simple_repeat Simple_repeat 1 150 0 2139 129 40 35 chr5 8949555 8949928 -190680222 - THE1C LTR MaLR 0 375 1 1602 181 0 11 chr5 8950917 8951194 -190678956 - AluJb SINE Alu -38 274 1 21 89 0 0 chr5 8951830 8951886 -190678264 + AT_rich Low_complexity Low_complexity 1 56 0 2224 94 3 13 chr5 8953578 8953876 -190676274 - AluSg SINE Alu -15 295 1 408 315 31 8 chr5 8954394 8954521 -190675629 - L2 LINE L2 0 3313 3184 29 0 0 0 chr5 8954675 8954704 -190675446 + AT_rich Low_complexity Low_complexity 1 29 0 245 346 53 45 chr5 8954783 8954916 -190675234 - MIR3 SINE MIR -26 182 49 482 259 0 0 chr5 8956451 8956559 -190673591 - MER45A DNA AcHobo 0 178 71 21 57 0 0 chr5 8960002 8960037 -190670113 + GC_rich Low_complexity Low_complexity 1 35 0 32 57 0 0 chr5 8960983 8961036 -190669114 + GC_rich Low_complexity Low_complexity 1 53 0 252 0 0 0 chr5 8962199 8962227 -190667923 + (T)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr5 8962449 8962470 -190667680 + AT_rich Low_complexity Low_complexity 1 21 0 246 315 48 67 chr5 8962883 8963048 -190667102 - L3b LINE CR1 -237 1346 1185 180 241 37 56 chr5 8963333 8963387 -190666763 - MIR SINE MIR -85 123 71 211 333 71 0 chr5 8964532 8964631 -190665519 - L2 LINE L2 -21 3292 3187 183 220 0 0 chr5 8964676 8964726 -190665424 + T-rich Low_complexity Low_complexity 1 50 0 671 248 171 5 chr5 8965743 8965965 -190664185 + MIR SINE MIR 1 259 -3 348 231 0 0 chr5 8966043 8966108 -190664042 - MIR SINE MIR -63 145 81 180 111 0 0 chr5 8967869 8967896 -190662254 + (TG)n Simple_repeat Simple_repeat 2 28 0 25 31 0 0 chr5 8968025 8968057 -190662093 + AT_rich Low_complexity Low_complexity 1 32 0 351 0 0 0 chr5 8968691 8968730 -190661420 + (CA)n Simple_repeat Simple_repeat 2 40 0 482 270 182 35 chr5 8968787 8969105 -190661045 - L1M4 LINE L1 -2660 3486 3122 403 293 55 85 chr5 8969111 8969417 -190660733 - MLT1I LTR MaLR -4 405 109 1434 271 125 17 chr5 8969417 8969952 -190660198 - MLT1G1 LTR MaLR 0 595 3 343 275 54 83 chr5 8970000 8970512 -190659638 - MLT1H LTR MaLR 0 549 15 1774 167 3 7 chr5 8970614 8970913 -190659237 - AluJb SINE Alu -14 298 1 413 232 36 58 chr5 8971830 8971968 -190658182 - ERVL LTR ERVL -2316 3448 3314 1011 133 40 96 chr5 8972051 8972300 -190657850 - THE1C LTR MaLR 0 375 141 268 103 0 0 chr5 8972276 8972315 -190657835 - THE1C LTR MaLR -389 39 1 * 747 266 75 50 chr5 8972356 8972618 -190657532 - MLT2E LTR ERVL -259 369 96 2113 115 3 16 chr5 8972618 8972923 -190657227 - AluSc SINE Alu -8 301 1 747 266 75 50 chr5 8972923 8972979 -190657171 - MLT2E LTR ERVL -532 96 43 2107 116 7 0 chr5 8973137 8973421 -190656729 - AluSx SINE Alu -26 286 1 4908 81 11 5 chr5 8973472 8974136 -190656014 + L1PA13 LINE L1 5476 6143 -20 180 0 0 0 chr5 8974141 8974161 -190655989 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 455 328 51 38 chr5 8974166 8974638 -190655512 - L1M4 LINE L1 -3235 2911 2434 26 0 0 0 chr5 8974996 8975022 -190655128 + AT_rich Low_complexity Low_complexity 1 26 0 200 227 0 0 chr5 8975082 8975126 -190655024 + A-rich Low_complexity Low_complexity 1 44 0 480 207 178 65 chr5 8976201 8976370 -190653780 + ORSL DNA AcHobo 81 268 -7 2702 17 0 0 chr5 8976547 8976845 -190653305 + AluYa5 SINE Alu 1 298 -13 392 243 84 99 chr5 8977492 8977694 -190652456 + MIR SINE MIR 20 218 -44 2456 52 3 16 chr5 8978042 8978351 -190651799 - AluY SINE Alu -6 305 1 315 143 26 13 chr5 8979668 8979745 -190650405 - L1MA7 LINE L1 -1 6290 6213 903 162 61 18 chr5 8979774 8980002 -190650148 - L1MA7 LINE L1 -22 6269 6032 299 333 42 17 chr5 8980917 8981037 -190649113 + MIR3 SINE MIR 65 187 -21 234 320 91 28 chr5 8981233 8981486 -190648664 + L1M4 LINE L1 4122 4390 -1756 231 276 48 35 chr5 8981965 8982110 -190648040 - L1M4 LINE L1 -1712 4434 4288 222 295 121 54 chr5 8982407 8982631 -190647519 + L2 LINE L2 3029 3267 -46 203 303 0 0 chr5 8982689 8982755 -190647395 + T-rich Low_complexity Low_complexity 3 68 0 2385 98 3 0 chr5 8983401 8983706 -190646444 - AluSg SINE Alu -4 306 1 1093 279 77 68 chr5 8983971 8984504 -190645646 - MER77 LTR ERV1 -6 599 62 257 266 266 23 chr5 8984605 8984778 -190645372 - MIR SINE MIR -33 229 15 734 189 128 36 chr5 8984786 8984982 -190645168 + MER20 DNA MER1_type 3 216 -3 1400 184 96 55 chr5 8985952 8986391 -190643759 - MLT1C LTR MaLR -9 458 2 271 28 0 0 chr5 8986576 8986612 -190643538 + MADE1 DNA Mariner 3 38 -42 246 32 0 0 chr5 8986865 8986896 -190643254 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 808 156 0 30 chr5 8986960 8987095 -190643055 - FLAM_C SINE Alu -2 131 1 2692 82 8 14 chr5 8988090 8988456 -190641694 + THE1B LTR MaLR 1 364 0 468 226 17 0 chr5 8988718 8988833 -190641317 + L1PB4 LINE L1 6038 6154 -2 198 365 12 12 chr5 8988859 8988944 -190641206 + L2 LINE L2 3229 3313 0 645 306 54 0 chr5 8989015 8989201 -190640949 - MIR SINE MIR -33 229 34 1650 190 39 33 chr5 8991032 8991395 -190638755 - MLT1A1 LTR MaLR 0 365 1 1392 198 89 51 chr5 8991726 8992025 -190638125 - MLT1C LTR MaLR 0 467 144 2284 116 47 11 chr5 8992025 8992387 -190637763 - THE1C LTR MaLR 0 375 1 1392 198 89 51 chr5 8992387 8992537 -190637613 - MLT1C LTR MaLR -323 144 1 664 239 23 11 chr5 8992657 8992833 -190637317 - MER45A DNA AcHobo 0 178 1 1073 280 40 23 chr5 8993447 8993770 -190636380 + L1ME LINE L1 55 390 -6006 216 0 0 0 chr5 8993770 8993794 -190636356 + (GA)n Simple_repeat Simple_repeat 2 25 0 1073 280 40 23 chr5 8993794 8993941 -190636209 + L1ME LINE L1 390 533 -5863 1716 256 42 7 chr5 8993957 8995208 -190634942 + L1ME LINE L1 2460 3815 -2400 276 125 0 42 chr5 8995255 8995327 -190634823 + (TA)n Simple_repeat Simple_repeat 1 69 0 326 287 45 38 chr5 8995331 8995488 -190634662 + L1ME LINE L1 3837 3994 -2221 2170 238 39 70 chr5 8995522 8996587 -190633563 + L1ME LINE L1 4440 5472 -743 1407 227 120 74 chr5 8996588 8997307 -190632843 + LTR1B LTR ERV1 1 752 -74 281 333 8 0 chr5 8997417 8997543 -190632607 + L1ME LINE L1 5465 5591 -644 * 570 207 9 0 chr5 8997529 8997672 -190632478 + L1MA10 LINE L1 5996 6299 -35 23 0 0 0 chr5 8998067 8998090 -190632060 + AT_rich Low_complexity Low_complexity 1 23 0 236 229 0 0 chr5 8998460 8998521 -190631629 + L1M4 LINE L1 4768 4828 -1318 269 272 22 29 chr5 8998972 8999108 -190631042 + L1M4 LINE L1 5696 5830 -348 380 238 0 0 chr5 9000749 9000829 -190629321 - MER82 DNA MER2_type -1 652 573 809 229 71 0 chr5 9000846 9001056 -190629094 - MER82 DNA MER2_type -426 227 3 349 299 107 22 chr5 9002175 9002399 -190627751 + MIR SINE MIR 17 259 -3 349 287 7 60 chr5 9003043 9003193 -190626957 - L2 LINE L2 -54 3259 3118 354 318 127 5 chr5 9003359 9003548 -190626602 + MIR SINE MIR 37 248 -14 2152 124 26 3 chr5 9003925 9004273 -190625877 - THE1B LTR MaLR 0 364 9 315 0 0 0 chr5 9004285 9004320 -190625830 + (CA)n Simple_repeat Simple_repeat 2 36 0 265 296 14 0 chr5 9005664 9005735 -190624415 - MIR SINE MIR -86 176 105 23 54 0 0 chr5 9006155 9006192 -190623958 + AT_rich Low_complexity Low_complexity 1 37 0 350 228 13 0 chr5 9006292 9006371 -190623779 + MER63 DNA MER1_type 44 749 -313 433 286 26 87 chr5 9006387 9006408 -190623742 - L1MC5 LINE L1 -264 7697 7676 1549 213 20 25 chr5 9006408 9006807 -190623343 + MLT2C1 LTR ERVL 1 397 0 433 286 26 87 chr5 9006807 9007212 -190622938 - L1MC5 LINE L1 -285 7676 7297 271 301 41 10 chr5 9007680 9007876 -190622274 - L1MC4 LINE L1 -994 7048 6847 307 362 50 14 chr5 9007888 9008029 -190622121 - L1MC4a LINE L1 -1120 6688 6543 2546 43 40 0 chr5 9008129 9008428 -190621722 + AluY SINE Alu 1 311 0 2499 51 0 6 chr5 9008860 9009171 -190620979 - AluY SINE Alu 0 311 3 772 265 133 27 chr5 9009195 9009880 -190620270 - L1MC4a LINE L1 -748 5398 5128 355 318 74 37 chr5 9010179 9010478 -190619672 - L1MC4a LINE L1 -1437 4709 4400 289 307 23 39 chr5 9010667 9010976 -190619174 - L1MC4a LINE L1 -1929 4217 3914 24 32 0 0 chr5 9011081 9011112 -190619038 + AT_rich Low_complexity Low_complexity 1 31 0 352 158 0 0 chr5 9011225 9011282 -190618868 + FLAM SINE Alu 61 117 -16 426 20 0 0 chr5 9011285 9011336 -190618814 + (CATA)n Simple_repeat Simple_repeat 2 52 0 5308 81 28 4 chr5 9013224 9013973 -190616177 - L1PA11 LINE L1 0 6174 5408 11694 134 25 21 chr5 9014424 9016493 -190613657 + Tigger1 DNA MER2_type 2 2078 -340 5413 146 10 24 chr5 9016516 9016645 -190613505 - L1PB3 LINE L1 0 6154 6025 2283 109 3 6 chr5 9016645 9016957 -190613193 - AluSx SINE Alu -1 311 1 5413 146 10 24 chr5 9016957 9018150 -190612000 - L1PB3 LINE L1 -129 6025 4853 311 83 0 0 chr5 9018150 9018198 -190611952 + Tigger1 DNA MER2_type 2068 2115 -303 3938 142 14 7 chr5 9018205 9018911 -190611239 - MER50 LTR ERV1 -23 711 1 1285 184 83 0 chr5 9018911 9019186 -190610964 + Tigger1 DNA MER2_type 2118 2415 -3 328 281 87 58 chr5 9019591 9019833 -190610317 - L1ME LINE L1 -336 5785 5537 386 165 65 24 chr5 9020376 9020546 -190609604 + (TA)n Simple_repeat Simple_repeat 1 177 0 28 0 0 0 chr5 9020548 9020576 -190609574 + AT_rich Low_complexity Low_complexity 1 28 0 47 19 0 0 chr5 9020701 9020755 -190609395 + AT_rich Low_complexity Low_complexity 1 54 0 23 54 0 0 chr5 9020872 9020909 -190609241 + AT_rich Low_complexity Low_complexity 1 37 0 773 225 11 16 chr5 9021686 9021873 -190608277 + MER5A DNA MER1_type 1 186 -3 676 218 262 17 chr5 9021984 9022393 -190607757 - MLT1H LTR MaLR -2 547 39 2352 90 3 0 chr5 9024525 9024835 -190605315 - AluY SINE Alu 0 311 1 954 192 0 0 chr5 9024985 9025136 -190605014 - AluJb SINE Alu -19 293 143 234 285 102 54 chr5 9025902 9026088 -190604062 - MLT1J LTR MaLR -294 217 23 226 303 86 40 chr5 9027890 9028042 -190602108 - L3 LINE CR1 -715 862 704 192 323 15 0 chr5 9028163 9028228 -190601922 - MIR3 SINE MIR -42 166 101 186 43 0 0 chr5 9028368 9028391 -190601759 + (A)n Simple_repeat Simple_repeat 1 23 0 217 242 91 0 chr5 9028722 9028788 -190601362 - L2 LINE L2 -526 2788 2717 1134 258 56 12 chr5 9028920 9029330 -190600820 + MLT1H1 LTR MaLR 134 554 -1 350 336 69 42 chr5 9029538 9029611 -190600539 + L2 LINE L2 2283 2353 -961 2077 122 84 29 chr5 9029611 9029954 -190600196 - THE1B LTR MaLR -2 362 1 350 336 69 42 chr5 9029954 9030142 -190600008 + L2 LINE L2 2353 2551 -763 21 0 0 0 chr5 9031031 9031052 -190599098 + AT_rich Low_complexity Low_complexity 1 21 0 651 291 36 4 chr5 9031077 9031328 -190598822 - MIR SINE MIR -1 261 3 335 213 0 27 chr5 9031637 9031712 -190598438 + Tigger5 DNA MER2_type 20 92 -2231 446 167 0 0 chr5 9031761 9031839 -190598311 + Tigger5 DNA MER2_type 2246 2323 0 376 262 56 0 chr5 9031857 9031964 -190598186 - MIR SINE MIR -148 114 2 352 277 132 76 chr5 9033857 9034358 -190595792 - L1ME4a LINE L1 0 6121 5593 180 77 0 0 chr5 9034597 9034623 -190595527 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 296 178 40 53 chr5 9035207 9035359 -190594791 + (TTATA)n Simple_repeat Simple_repeat 5 154 0 216 97 0 0 chr5 9035376 9035407 -190594743 + (TG)n Simple_repeat Simple_repeat 2 32 0 1965 267 112 48 chr5 9035423 9037906 -190592244 - L1MCa LINE L1 -3403 3538 620 2533 175 24 0 chr5 9037906 9038328 -190591822 - MSTB1 LTR MaLR 0 432 1 1965 267 112 48 chr5 9038328 9038929 -190591221 - L1MCa LINE L1 -6321 620 59 443 274 50 11 chr5 9039522 9039701 -190590449 - LTR33 LTR ERVL -2 519 334 248 305 92 0 chr5 9039797 9039938 -190590212 - LTR33 LTR ERVL -355 166 13 2170 118 0 0 chr5 9040126 9040422 -190589728 - AluSq SINE Alu -16 297 2 410 297 101 9 chr5 9040424 9040643 -190589507 - L2 LINE L2 -775 2539 2301 22 35 0 0 chr5 9043715 9043744 -190586406 + AT_rich Low_complexity Low_complexity 1 29 0 2711 139 13 13 chr5 9044192 9044644 -190585506 - L1MA2 LINE L1 0 6304 5853 6172 99 17 1 chr5 9044644 9045514 -190584636 + L1PA13 LINE L1 5279 6162 -1 3659 150 39 33 chr5 9045522 9045998 -190584152 - L1MA2 LINE L1 -447 5858 5387 2361 90 0 3 chr5 9045998 9046309 -190583841 - AluY SINE Alu -1 310 1 3659 150 39 33 chr5 9046309 9046519 -190583631 - L1MA2 LINE L1 -918 5387 5163 216 0 0 0 chr5 9046519 9046543 -190583607 + (TG)n Simple_repeat Simple_repeat 1 24 0 3659 150 39 33 chr5 9046543 9046716 -190583434 - L1MA2 LINE L1 -1142 5163 4993 1322 144 22 51 chr5 9046872 9047226 -190582924 - L1M1 LINE L1 -743 5403 5108 4481 132 28 74 chr5 9047226 9048056 -190582094 + L1MA4 LINE L1 5497 6292 -8 740 294 167 27 chr5 9049289 9049727 -190580423 + L2 LINE L2 1354 1852 -1462 288 250 0 54 chr5 9049801 9049893 -190580257 + L2 LINE L2 1867 1953 -1361 260 314 20 20 chr5 9050269 9050422 -190579728 + L1ME LINE L1 5526 5678 -443 21 36 0 0 chr5 9050698 9050726 -190579424 + AT_rich Low_complexity Low_complexity 1 28 0 215 353 147 0 chr5 9052188 9052304 -190577846 + L2 LINE L2 3114 3246 -26 2039 142 31 0 chr5 9052803 9053127 -190577023 + THE1B LTR MaLR 1 334 -30 1368 113 26 0 chr5 9054122 9054316 -190575834 + THE1B LTR MaLR 133 331 -33 327 191 0 0 chr5 9055248 9055316 -190574834 + (CA)n Simple_repeat Simple_repeat 2 69 0 980 106 0 14 chr5 9055872 9056014 -190574136 - AluSg/x SINE Alu -17 293 154 22 56 0 0 chr5 9056345 9056381 -190573769 + AT_rich Low_complexity Low_complexity 1 36 0 274 361 57 15 chr5 9058815 9059078 -190571072 + L2 LINE L2 2623 2896 -418 340 347 15 10 chr5 9061094 9061293 -190568857 + MIR SINE MIR 63 262 0 2621 65 0 0 chr5 9062855 9063163 -190566987 - AluY SINE Alu -3 308 1 902 260 13 0 chr5 9063168 9063395 -190566755 + L1ME3A LINE L1 5522 5751 -419 810 116 7 87 chr5 9063495 9063633 -190566517 - AluSc SINE Alu -161 148 22 372 310 9 0 chr5 9063730 9063846 -190566304 + L1ME3A LINE L1 6049 6165 -5 642 60 0 0 chr5 9064006 9064089 -190566061 + (TA)n Simple_repeat Simple_repeat 2 84 0 232 244 89 0 chr5 9064258 9064348 -190565802 + L1M4c LINE L1 2382 2479 -3905 667 178 6 57 chr5 9064378 9064535 -190565615 - L1MC3 LINE L1 -875 6910 6762 2627 208 15 4 chr5 9064570 9065105 -190565045 + L1MC3 LINE L1 6994 7534 -251 365 298 67 6 chr5 9065107 9065285 -190564865 + L1MC4a LINE L1 6591 6779 -1029 24 53 0 0 chr5 9065472 9065510 -190564640 + AT_rich Low_complexity Low_complexity 1 38 0 293 308 47 0 chr5 9067418 9067525 -190562625 + L2 LINE L2 3201 3312 -1 219 316 60 8 chr5 9067890 9068016 -190562134 + MIR SINE MIR 11 143 -66 21 0 0 0 chr5 9068644 9068665 -190561485 + AT_rich Low_complexity Low_complexity 1 21 0 443 154 22 0 chr5 9068980 9069071 -190561079 - AluJb SINE Alu 0 312 220 * 720 208 0 0 chr5 9069065 9069185 -190560965 - AluJb SINE Alu -191 121 2 24 0 0 0 chr5 9069199 9069223 -190560927 + AT_rich Low_complexity Low_complexity 1 24 0 1906 149 0 36 chr5 9069253 9069561 -190560589 - AluJb SINE Alu -15 297 1 23 33 0 0 chr5 9070325 9070355 -190559795 + AT_rich Low_complexity Low_complexity 1 30 0 2068 44 52 0 chr5 9071167 9071417 -190558733 - AluY SINE Alu -1 310 48 1538 22 0 16 chr5 9071614 9071799 -190558351 + AluYa5 SINE Alu 120 301 -10 226 237 10 82 chr5 9072168 9072265 -190557885 + MIR SINE MIR 52 141 -121 234 114 45 0 chr5 9072645 9072689 -190557461 - MLT1J2 LTR MaLR -34 416 371 345 318 7 39 chr5 9072879 9073033 -190557117 - MLT1H LTR MaLR -307 242 94 386 256 22 0 chr5 9074817 9074907 -190555243 - MER5A DNA MER1_type -85 104 13 258 336 99 15 chr5 9075448 9075579 -190554571 - L2 LINE L2 -1 3312 3171 28 29 0 0 chr5 9075586 9075621 -190554529 + AT_rich Low_complexity Low_complexity 1 35 0 297 0 0 0 chr5 9075742 9075775 -190554375 + (CA)n Simple_repeat Simple_repeat 2 34 0 321 68 0 0 chr5 9075775 9075819 -190554331 + (GA)n Simple_repeat Simple_repeat 1 44 0 1439 175 61 61 chr5 9077200 9077594 -190552556 + MLT1C LTR MaLR 1 394 -73 309 261 169 72 chr5 9078279 9078528 -190551622 - L2 LINE L2 -11 3302 3030 328 238 61 62 chr5 9078694 9078884 -190551266 + L1MC4a LINE L1 5748 5939 -182 259 320 10 10 chr5 9079160 9079257 -190550893 - MLT1I LTR MaLR -309 100 4 187 336 133 8 chr5 9081401 9081529 -190548621 + L2 LINE L2 3126 3269 -3 2264 200 90 24 chr5 9082221 9082796 -190547354 - L1MB5 LINE L1 -8 6166 5554 21 36 0 0 chr5 9083869 9083897 -190546253 + AT_rich Low_complexity Low_complexity 1 28 0 655 186 9 0 chr5 9084706 9084937 -190545213 - L1MA9 LINE L1 -22 6290 5962 2331 53 0 86 chr5 9085178 9085516 -190544634 + AluY SINE Alu 1 309 -2 1699 271 52 17 chr5 9086790 9087476 -190542674 - L1MC4 LINE L1 -1 8041 7252 1046 225 166 103 chr5 9087477 9087557 -190542593 - L1MC4 LINE L1 -957 7085 7011 208 0 0 0 chr5 9087557 9087580 -190542570 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2000 124 3 17 chr5 9087580 9087870 -190542280 - AluSx SINE Alu -1 308 1 1046 225 166 103 chr5 9087870 9088219 -190541931 - L1MC4 LINE L1 -1031 7011 6606 192 40 0 0 chr5 9088219 9088244 -190541906 + (TG)n Simple_repeat Simple_repeat 2 26 0 1046 225 166 103 chr5 9088244 9088402 -190541748 - L1MC4 LINE L1 -1436 6606 6459 214 241 0 35 chr5 9088847 9088876 -190541274 + GA-rich Low_complexity Low_complexity 2 30 -27 1680 164 43 0 chr5 9088876 9089181 -190540969 + L1MA4 LINE L1 5983 6300 0 214 241 0 35 chr5 9089181 9089209 -190540941 + GA-rich Low_complexity Low_complexity 30 57 0 200 276 69 52 chr5 9089577 9089635 -190540515 + L2 LINE L2 3148 3206 -66 232 328 47 16 chr5 9091748 9091876 -190538274 + MIR SINE MIR 129 260 -2 967 282 103 3 chr5 9092229 9092616 -190537534 + LTR16A LTR ERVL 25 450 0 230 264 99 33 chr5 9092616 9092707 -190537443 + MIR SINE MIR 81 177 -85 638 199 0 73 chr5 9092980 9093116 -190537034 - FRAM SINE Alu -43 133 8 389 280 143 32 chr5 9093339 9093528 -190536622 + L2 LINE L2 2882 3091 -181 1172 231 46 53 chr5 9093995 9094406 -190535744 - MLT1C LTR MaLR -1 466 59 189 0 0 0 chr5 9095277 9095298 -190534852 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 251 238 50 38 chr5 9095506 9095586 -190534564 - MIR SINE MIR 0 262 182 644 143 6 34 chr5 9095597 9095772 -190534378 + (TA)n Simple_repeat Simple_repeat 1 170 0 560 309 133 17 chr5 9095886 9096429 -190533721 - L1M4 LINE L1 -2752 3394 2789 1969 114 0 7 chr5 9097676 9097949 -190532201 - AluSq SINE Alu -8 305 35 182 391 0 17 chr5 9098330 9098445 -190531705 + L3b LINE CR1 1119 1231 -352 678 332 26 142 chr5 9099345 9099571 -190530579 + L1PA7 LINE L1 5867 6066 -88 184 186 0 23 chr5 9100740 9100783 -190529367 + L2 LINE L2 3186 3227 -86 486 319 86 9 chr5 9100898 9101130 -190529020 + MIR SINE MIR 10 259 -3 2377 113 3 0 chr5 9101522 9101833 -190528317 - AluSx SINE Alu 0 312 1 21 0 0 0 chr5 9102023 9102044 -190528106 + AT_rich Low_complexity Low_complexity 1 21 0 567 272 62 5 chr5 9102326 9102521 -190527629 - MER58A DNA MER1_type 0 224 19 2036 75 30 0 chr5 9102702 9102969 -190527181 + L1PA12 LINE L1 5845 6119 -49 203 396 43 40 chr5 9104101 9104475 -190525675 + L3 LINE CR1 403 777 -800 302 280 167 18 chr5 9104669 9104837 -190525313 - MIR SINE MIR -42 220 28 294 239 14 0 chr5 9105118 9105189 -190524961 + MIR3 SINE MIR 128 199 -9 1084 184 34 5 chr5 9105334 9105541 -190524609 - MLT2C1 LTR ERVL -184 213 1 740 239 54 47 chr5 9105542 9105842 -190524308 - ERVL LTR ERVL -2 5755 5380 26 74 0 0 chr5 9105978 9106032 -190524118 + AT_rich Low_complexity Low_complexity 1 54 0 312 73 455 0 chr5 9106249 9106304 -190523846 + MADE1 DNA Mariner 1 80 0 2416 71 0 16 chr5 9106395 9106703 -190523447 + AluY SINE Alu 1 303 -8 1079 231 30 24 chr5 9106891 9107340 -190522810 - MLT1D LTR MaLR -1 504 4 237 116 47 23 chr5 9107341 9107384 -190522766 - MLT1D LTR MaLR -453 52 9 376 290 75 37 chr5 9107681 9107895 -190522255 - MLT1E LTR MaLR -367 226 5 363 318 99 10 chr5 9108991 9109183 -190520967 - MIR SINE MIR -9 253 45 284 315 56 49 chr5 9109499 9109661 -190520489 + L2 LINE L2 2985 3147 -125 229 262 29 10 chr5 9110961 9111064 -190519086 + (TA)n Simple_repeat Simple_repeat 2 106 0 570 256 73 55 chr5 9111805 9112094 -190518056 - MLT1I LTR MaLR -2 407 114 184 318 78 61 chr5 9113523 9113768 -190516382 + L2 LINE L2 2864 3112 -160 228 135 0 0 chr5 9113768 9113805 -190516345 + (TTCC)n Simple_repeat Simple_repeat 3 39 0 284 351 38 0 chr5 9114055 9114186 -190515964 - MIR SINE MIR -71 191 56 299 317 10 0 chr5 9115924 9116028 -190514122 + L1ME2 LINE L1 6038 6142 -22 243 158 0 0 chr5 9117988 9118026 -190512124 - L2 LINE L2 0 3272 3235 273 29 0 0 chr5 9118586 9118620 -190511530 + (CA)n Simple_repeat Simple_repeat 1 34 0 286 204 0 0 chr5 9118683 9118694 -190511456 + MER3 DNA MER1_type 37 47 -162 384 244 57 16 chr5 9118694 9118817 -190511333 - MER3 DNA MER1_type 0 209 82 254 281 21 21 chr5 9118838 9118934 -190511216 - L1MC/D LINE L1 -2031 5777 5682 1683 173 62 7 chr5 9169223 9169530 -190460620 - MER58B DNA MER1_type -17 324 1 202 200 25 50 chr5 9170013 9170093 -190460057 + GA-rich Low_complexity Low_complexity 2 79 0 241 132 19 19 chr5 9170280 9170333 -190459817 + GA-rich Low_complexity Low_complexity 4 56 0 279 274 68 35 chr5 9172541 9172749 -190457401 - L1MC/D LINE L1 -734 5450 5256 295 277 70 78 chr5 9174405 9174647 -190455503 - L2 LINE L2 -4 3309 3070 684 309 85 32 chr5 9174757 9175132 -190455018 - L2 LINE L2 -473 2841 2447 258 240 53 13 chr5 9175364 9175439 -190454711 + L2 LINE L2 3159 3236 -77 1914 178 15 15 chr5 9176387 9176729 -190453421 + MER2 DNA MER2_type 2 343 -1 21 57 0 0 chr5 9176801 9176836 -190453314 + AT_rich Low_complexity Low_complexity 1 35 0 277 224 0 0 chr5 9177408 9177466 -190452684 + MIR SINE MIR 184 241 -21 214 255 20 0 chr5 9177482 9177533 -190452617 + (TTG)n Simple_repeat Simple_repeat 2 53 0 1840 153 0 33 chr5 9178243 9178550 -190451600 + AluJb SINE Alu 1 297 -15 265 211 28 0 chr5 9178755 9178826 -190451324 + L1MA7 LINE L1 6213 6285 -6 317 351 45 8 chr5 9179163 9179297 -190450853 + MER5A DNA MER1_type 3 141 -48 556 258 137 61 chr5 9179428 9179757 -190450393 + MLT1I LTR MaLR 52 405 -4 186 338 127 53 chr5 9180015 9180707 -190449443 - L2 LINE L2 -711 2603 1861 1251 235 101 38 chr5 9182572 9183015 -190447135 - MLT1C LTR MaLR -1 466 1 318 275 85 17 chr5 9183587 9183828 -190446322 - MLT1L LTR MaLR 0 597 248 246 62 0 0 chr5 9184531 9184563 -190445587 + (T)n Simple_repeat Simple_repeat 1 32 0 13093 17 0 13 chr5 9184564 9186904 -190443246 - L1HS LINE L1 0 6155 3833 605 213 25 0 chr5 9186903 9187025 -190443125 + L1ME3A LINE L1 6038 6162 -8 * 1956 145 21 0 chr5 9189072 9189361 -190440789 + AluSx SINE Alu 1 295 -17 659 209 214 15 chr5 9189381 9189577 -190440573 - MER106A DNA MER1_type 0 236 2 347 240 24 72 chr5 9190100 9190225 -190439925 + L2 LINE L2 3195 3313 0 380 291 162 50 chr5 9190890 9191475 -190438675 - L2 LINE L2 -1036 2278 1628 449 211 106 33 chr5 9193130 9193310 -190436840 - LTR16A1 LTR ERVL 0 457 265 2287 59 0 53 chr5 9193507 9193811 -190436339 + AluY SINE Alu 1 288 -23 1105 32 0 0 chr5 9193816 9193942 -190436208 + L1PA5 LINE L1 6028 6153 -1 294 221 57 150 chr5 9194191 9194331 -190435819 - MER21B LTR ERV1 -187 676 550 443 291 53 89 chr5 9194357 9194687 -190435463 - MER21B LTR ERV1 -279 326 6 874 266 89 29 chr5 9195357 9195650 -190434500 + LTR33 LTR ERVL 16 339 -182 2429 107 133 13 chr5 9195650 9196032 -190434118 - MSTA LTR MaLR 0 428 1 874 266 89 29 chr5 9196032 9196118 -190434032 + LTR33 LTR ERVL 339 418 -103 28 48 0 0 chr5 9196329 9196371 -190433779 + AT_rich Low_complexity Low_complexity 1 42 0 1750 222 79 35 chr5 9196429 9196937 -190433213 + MER119 DNA MER1_type 54 583 0 1171 127 31 75 chr5 9197504 9197732 -190432418 + MLT1B LTR MaLR 1 218 -172 870 207 59 104 chr5 9197731 9198100 -190432050 + MLT1A1 LTR MaLR 10 428 0 * 839 174 47 0 chr5 9198100 9198243 -190431907 + MLT1B LTR MaLR 218 367 -23 280 300 47 33 chr5 9201875 9202025 -190428125 - L3 LINE CR1 -302 1275 1124 183 250 36 18 chr5 9202322 9202378 -190427772 + MIR SINE MIR 96 152 -110 22 0 0 0 chr5 9203036 9203058 -190427092 + AT_rich Low_complexity Low_complexity 1 22 0 202 208 30 79 chr5 9204569 9204670 -190425480 + (CA)n Simple_repeat Simple_repeat 1 96 0 194 291 89 25 chr5 9204785 9204864 -190425286 + MIR3 SINE MIR 110 193 -15 351 264 82 0 chr5 9205760 9205870 -190424280 + L1ME4a LINE L1 5513 5631 -490 406 289 104 66 chr5 9205874 9206327 -190423823 + L1ME4a LINE L1 5651 6120 -1 511 255 156 45 chr5 9206511 9206754 -190423396 - MLT1H LTR MaLR -241 308 39 2535 137 40 28 chr5 9207229 9207653 -190422497 - MSTB1 LTR MaLR 0 432 4 397 213 12 0 chr5 9208556 9208636 -190421514 - L2 LINE L2 -1 3312 3232 1327 220 19 38 chr5 9211255 9211559 -190418591 - MLT1D LTR MaLR 0 505 206 1643 159 17 30 chr5 9211559 9211861 -190418289 - AluSx SINE Alu -14 298 1 1327 220 19 38 chr5 9211861 9211874 -190418276 - MLT1D LTR MaLR -299 206 194 1163 215 12 32 chr5 9211864 9212110 -190418040 - MLT1D LTR MaLR -263 242 2 * 214 234 168 28 chr5 9212117 9212224 -190417926 - MIR SINE MIR -70 192 71 2454 71 0 16 chr5 9213918 9214226 -190415924 + AluSx SINE Alu 1 303 -9 1710 312 114 23 chr5 9215488 9216598 -190413552 - L2 LINE L2 -30 3283 2012 4584 190 76 8 chr5 9216598 9217440 -190412710 + MER54A LTR ERVL 3 901 0 1710 312 114 23 chr5 9217440 9217739 -190412411 - L2 LINE L2 -1301 2012 1742 1796 106 152 8 chr5 9217958 9218222 -190411928 + AluSx SINE Alu 1 302 0 27 49 0 0 chr5 9218502 9218543 -190411607 + AT_rich Low_complexity Low_complexity 1 41 0 2343 125 46 8 chr5 9219571 9219922 -190410228 + THE1B LTR MaLR 1 364 0 5490 133 16 10 chr5 9222352 9223390 -190406760 - L1PA16 LINE L1 -70 6096 5053 2464 126 36 0 chr5 9223390 9223779 -190406371 + L1PA15-16 LINE L1 2347 2749 -4100 22 0 0 0 chr5 9223791 9223813 -190406337 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr5 9224723 9224754 -190405396 + AT_rich Low_complexity Low_complexity 1 31 0 25 65 0 0 chr5 9224809 9224855 -190405295 + AT_rich Low_complexity Low_complexity 1 46 0 424 306 32 19 chr5 9225820 9225977 -190404173 + MIR SINE MIR 17 175 -87 444 334 50 21 chr5 9226591 9226929 -190403221 + HAL1 LINE L1 1408 1755 -752 185 164 0 18 chr5 9227120 9227175 -190402975 + (TA)n Simple_repeat Simple_repeat 1 54 0 301 231 15 0 chr5 9228048 9228113 -190402037 + MIR SINE MIR 104 169 -93 271 318 12 0 chr5 9228803 9228888 -190401262 + MIR3 SINE MIR 112 197 -11 1241 272 139 18 chr5 9230380 9231022 -190399128 + L2 LINE L2 2095 2826 -488 291 71 0 0 chr5 9231022 9231064 -190399086 + (CA)n Simple_repeat Simple_repeat 1 42 0 1241 272 139 18 chr5 9231064 9231102 -190399048 + L2 LINE L2 2826 2858 -456 2634 79 18 147 chr5 9232050 9232559 -190397591 - MLT2A1 LTR ERVL 0 444 2 246 62 0 0 chr5 9232599 9232631 -190397519 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2004 126 0 4 chr5 9232631 9232909 -190397241 - AluSc SINE Alu -32 277 1 201 255 0 20 chr5 9233730 9233781 -190396369 + GA-rich Low_complexity Low_complexity 3 52 0 1639 68 5 14 chr5 9234220 9234427 -190395723 + AluY SINE Alu 90 294 -17 537 272 380 19 chr5 9234702 9235389 -190394761 - L2 LINE L2 -920 2394 1460 1920 199 119 19 chr5 9236071 9236543 -190393607 - MLT2B1 LTR ERVL 0 520 2 2325 109 3 0 chr5 9236849 9237161 -190392989 - AluSq SINE Alu 0 313 1 1865 137 70 23 chr5 9237679 9238022 -190392128 + MER46B DNA MER2_type 3 236 0 315 0 0 0 chr5 9239207 9239242 -190390908 + (TG)n Simple_repeat Simple_repeat 2 36 0 877 141 82 0 chr5 9239259 9239394 -190390756 - AluSg/x SINE Alu -27 285 140 1446 217 113 29 chr5 9239477 9239859 -190390291 - MLT2D LTR ERVL 0 414 1 1297 229 4 0 chr5 9240748 9241019 -190389131 + L1PA16 LINE L1 5895 6166 0 549 99 0 0 chr5 9241022 9241103 -190389047 + (GGAA)n Simple_repeat Simple_repeat 3 83 0 2369 168 49 35 chr5 9241235 9241687 -190388463 - MLT2C2 LTR ERVL -6 458 1 263 208 179 1 chr5 9241937 9242169 -190387981 - Charlie7 DNA MER1_type -8 2604 2320 440 219 17 0 chr5 9242184 9242303 -190387847 + L1M4c LINE L1 2296 2416 -3968 1003 249 179 18 chr5 9242304 9242801 -190387349 - Charlie7 DNA MER1_type -298 2314 1738 485 247 0 0 chr5 9242800 9242893 -190387257 - MLT1D LTR MaLR -411 94 2 * 5377 68 36 21 chr5 9245270 9246025 -190384125 + MER4E LTR ERV1 1 766 0 2658 58 0 0 chr5 9246631 9246940 -190383210 - AluY SINE Alu -2 309 1 2264 64 0 0 chr5 9247104 9247370 -190382780 - AluY SINE Alu -45 266 1 1781 125 133 77 chr5 9248916 9249308 -190380842 + MLT2D LTR ERVL 1 414 0 493 219 144 31 chr5 9250320 9250480 -190379670 - MER112 DNA MER1_type -2 258 81 2180 135 37 6 chr5 9251392 9251719 -190378431 - MER1B DNA MER1_type -1 338 2 301 252 42 84 chr5 9252672 9252815 -190377335 - MIR3 SINE MIR -51 157 21 547 213 0 0 chr5 9253207 9253301 -190376849 + MER58B DNA MER1_type 3 96 -245 992 151 0 41 chr5 9253302 9253474 -190376676 - AluJb SINE Alu -19 293 129 910 220 33 19 chr5 9253491 9253705 -190376445 + MER58B DNA MER1_type 125 341 0 1567 164 3 66 chr5 9253923 9254071 -190376079 + AluJb SINE Alu 1 124 -188 297 0 0 0 chr5 9254071 9254104 -190376046 + (TA)n Simple_repeat Simple_repeat 2 34 0 1567 164 3 66 chr5 9254104 9254282 -190375868 + AluJb SINE Alu 124 312 0 370 289 16 0 chr5 9254327 9254455 -190375695 - MER20 DNA MER1_type -4 215 86 2567 61 0 10 chr5 9255693 9256005 -190374145 + AluY SINE Alu 1 309 -2 2336 96 0 3 chr5 9257806 9258120 -190372030 + AluSq SINE Alu 1 313 0 643 251 86 67 chr5 9258216 9258647 -190371503 + MLT1H LTR MaLR 107 545 -4 202 143 41 0 chr5 9259333 9259382 -190370768 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 238 302 191 0 chr5 9259531 9259657 -190370493 - MIR3 SINE MIR -23 185 36 226 255 53 75 chr5 9259755 9259849 -190370301 - L2 LINE L2 -4 3268 3177 239 333 139 19 chr5 9260095 9260563 -190369587 - L2 LINE L2 -427 2887 2364 401 246 215 26 chr5 9260605 9260800 -190369350 + MLT1J LTR MaLR 1 232 -279 668 207 8 139 chr5 9260940 9261191 -190368959 + MER20 DNA MER1_type 2 219 0 458 337 15 10 chr5 9262801 9263006 -190367144 + MIR SINE MIR 51 256 -6 587 294 95 5 chr5 9264256 9264467 -190365683 - MLT1I LTR MaLR -81 328 99 275 254 30 0 chr5 9268223 9268290 -190361860 - LTR16C LTR ERVL -9 482 414 2311 114 0 3 chr5 9269067 9269375 -190360775 - AluSx SINE Alu -5 307 1 225 154 0 0 chr5 9270188 9270227 -190359923 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr5 9271291 9271313 -190358837 + AT_rich Low_complexity Low_complexity 1 22 0 2306 111 141 5 chr5 9272542 9272919 -190357231 - MSTA LTR MaLR 0 428 1 300 70 0 0 chr5 9323937 9323980 -190306170 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2390 45 10 3 chr5 9323988 9324280 -190305870 - AluY SINE Alu -17 294 1 1501 217 15 6 chr5 9324289 9324616 -190305534 - L1MB3 LINE L1 -1 6182 5853 241 354 104 11 chr5 9325581 9325841 -190304309 + L3b LINE CR1 1103 1386 -197 231 152 0 0 chr5 9326820 9326866 -190303284 + GA-rich Low_complexity Low_complexity 1 46 0 2348 96 0 3 chr5 9328637 9328939 -190301211 + AluY SINE Alu 1 301 -10 325 283 108 35 chr5 9329959 9330507 -190299643 + L1ME4a LINE L1 5530 6117 -4 358 301 10 10 chr5 9330571 9330674 -190299476 - MIR SINE MIR -50 212 110 641 167 118 73 chr5 9331690 9331894 -190298256 - MER5C DNA MER1_type -1 323 111 264 307 88 29 chr5 9332971 9333108 -190297042 - MIR SINE MIR -92 170 26 1076 201 5 33 chr5 9334264 9334478 -190295672 - MER20 DNA MER1_type -6 213 6 23 0 0 0 chr5 9334911 9334934 -190295216 + AT_rich Low_complexity Low_complexity 1 23 0 1519 86 16 67 chr5 9335744 9335892 -190294258 - L1MA1 LINE L1 -7 6295 6141 1903 159 10 3 chr5 9335892 9336064 -190294086 - AluSx SINE Alu -9 303 134 321 26 0 0 chr5 9336064 9336102 -190294048 + (TG)n Simple_repeat Simple_repeat 1 38 0 276 100 0 0 chr5 9336105 9336145 -190294005 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 1903 159 10 3 chr5 9336145 9336269 -190293881 - AluSx SINE Alu -179 133 1 1519 86 16 67 chr5 9336269 9336286 -190293864 - L1MA1 LINE L1 -161 6141 6125 2114 127 0 0 chr5 9336286 9336577 -190293573 - AluSx SINE Alu -19 293 3 1519 86 16 67 chr5 9336577 9336665 -190293485 - L1MA1 LINE L1 -177 6125 6054 207 0 0 0 chr5 9337082 9337105 -190293045 + (A)n Simple_repeat Simple_repeat 1 23 0 2163 198 58 81 chr5 9337436 9338003 -190292147 + MLT2B3 LTR ERVL 1 554 0 308 169 68 0 chr5 9338238 9338297 -190291853 + L2 LINE L2 3250 3312 -1 290 87 22 0 chr5 9341999 9342045 -190288105 + (GA)n Simple_repeat Simple_repeat 1 47 0 1844 240 33 7 chr5 9342100 9342550 -190287600 + MLT1C LTR MaLR 6 467 0 394 323 150 18 chr5 9344080 9344306 -190285844 - MIR SINE MIR 0 262 7 498 267 43 74 chr5 9348079 9348337 -190281813 - MLT1C LTR MaLR -213 254 5 376 118 40 0 chr5 9348458 9348534 -190281616 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 2030 128 0 13 chr5 9348989 9349302 -190280848 - AluSx SINE Alu -3 309 1 953 201 106 82 chr5 9351437 9352071 -190278079 - MER4C LTR ERV1 0 465 10 2122 86 7 23 chr5 9352912 9353216 -190276934 + AluSq SINE Alu 1 299 -14 245 382 45 6 chr5 9353516 9353673 -190276477 + MIR SINE MIR 20 182 -80 1850 142 0 13 chr5 9353972 9354274 -190275876 + AluSg SINE Alu 1 298 -12 208 271 0 0 chr5 9356023 9356071 -190274079 + MIR SINE MIR 194 241 -21 1055 186 29 5 chr5 9356518 9356869 -190273281 - Tigger1 DNA MER2_type -5 2413 2 391 262 58 0 chr5 9358290 9358393 -190271757 + L2 LINE L2 3137 3245 -27 2276 61 40 0 chr5 9359396 9359692 -190270458 - AluY SINE Alu -3 308 1 298 366 6 19 chr5 9360514 9360675 -190269475 - MER5B DNA MER1_type -2 176 18 653 236 61 30 chr5 9360910 9361112 -190269038 + MIR SINE MIR 50 262 0 2159 105 0 0 chr5 9361207 9361501 -190268649 + AluSg SINE Alu 1 294 -16 1541 192 0 3 chr5 9364442 9364728 -190265422 + AluJo SINE Alu 1 285 -27 21 0 0 0 chr5 9364728 9364749 -190265401 + AT_rich Low_complexity Low_complexity 1 21 0 239 224 60 15 chr5 9364749 9364816 -190265334 - L1MC4 LINE L1 -1339 6703 6634 312 27 0 0 chr5 9364863 9364900 -190265250 + (GA)n Simple_repeat Simple_repeat 1 37 0 1686 154 3 20 chr5 9365859 9366151 -190263999 + AluJb SINE Alu 1 287 -25 180 0 0 0 chr5 9366283 9366303 -190263847 + (GA)n Simple_repeat Simple_repeat 1 20 0 905 189 13 44 chr5 9367177 9367234 -190262916 + MER96B DNA MER1_type? 190 247 -170 1237 231 12 82 chr5 9367234 9367636 -190262514 - MLT1A2 LTR MaLR 0 374 1 905 189 13 44 chr5 9367636 9367805 -190262345 + MER96B DNA MER1_type? 247 409 -8 238 293 102 32 chr5 9368724 9368881 -190261269 + MER5A DNA MER1_type 8 175 -14 501 274 9 50 chr5 9369316 9369496 -190260654 - MIR SINE MIR -51 157 5 242 322 132 0 chr5 9369816 9369937 -190260213 + MIR SINE MIR 112 248 -14 297 366 6 0 chr5 9371272 9371444 -190258706 + (TTGG)n Simple_repeat Simple_repeat 2 174 0 278 292 42 0 chr5 9371538 9371634 -190258516 + Charlie8 DNA MER1_type 184 283 -2134 2326 73 3 0 chr5 9372046 9372346 -190257804 + AluY SINE Alu 1 301 -10 30 69 0 0 chr5 9372375 9372433 -190257717 + AT_rich Low_complexity Low_complexity 1 58 0 597 246 18 53 chr5 9373389 9373451 -190256699 - MIR SINE MIR -48 214 151 1965 123 0 7 chr5 9373451 9373753 -190256397 + AluSx SINE Alu 1 300 -12 597 246 18 53 chr5 9373753 9373910 -190256240 - MIR SINE MIR -111 151 1 249 333 0 0 chr5 9374064 9374127 -190256023 + L2 LINE L2 3205 3267 -5 857 198 8 88 chr5 9375131 9375369 -190254781 + MER20 DNA MER1_type 1 219 0 449 331 43 0 chr5 9376014 9376153 -190253997 - L2 LINE L2 -6 3266 3122 2265 157 13 18 chr5 9376635 9377023 -190253127 - MLT1B LTR MaLR -2 388 3 316 280 99 49 chr5 9377027 9377270 -190252880 - LTR33 LTR ERVL -161 360 106 442 193 9 55 chr5 9378118 9378227 -190251923 - MER104 DNA Tc2 -76 104 1 1955 139 13 3 chr5 9378370 9378679 -190251471 + AluJb SINE Alu 1 312 0 1444 124 0 0 chr5 9379170 9379379 -190250771 - AluSg/x SINE Alu 0 312 104 542 125 125 0 chr5 9379401 9379489 -190250661 - AluSq/x SINE Alu -180 132 34 3425 92 11 0 chr5 9379695 9380143 -190250007 - MLT2A2 LTR ERVL 0 453 1 1943 145 0 3 chr5 9381036 9381340 -190248810 + AluJb SINE Alu 1 303 -9 228 330 34 0 chr5 9382367 9382455 -190247695 - L2 LINE L2 -42 3271 3181 261 163 0 0 chr5 9383527 9383576 -190246574 + (TG)n Simple_repeat Simple_repeat 1 49 0 304 221 85 79 chr5 9387319 9387502 -190242648 - L1MC/D LINE L1 -419 5745 5550 336 319 17 9 chr5 9389121 9389237 -190240913 + MIR SINE MIR 22 138 -124 679 189 16 74 chr5 9389920 9390110 -190240040 + MER5A DNA MER1_type 4 182 -7 205 330 20 60 chr5 9390118 9390218 -190239932 - MIR SINE MIR -59 149 54 1857 147 13 7 chr5 9390625 9390931 -190239219 + AluJo SINE Alu 1 308 -4 229 371 8 8 chr5 9391876 9392000 -190238150 - MIR SINE MIR -119 143 20 2274 83 52 3 chr5 9393323 9393613 -190236537 - AluSx SINE Alu -8 304 1 290 285 17 12 chr5 9394086 9394258 -190235892 + (CATATA)n Simple_repeat Simple_repeat 2 174 0 437 199 4 45 chr5 9394284 9394517 -190235633 + (CATA)n Simple_repeat Simple_repeat 1 242 -1179 6950 118 46 55 chr5 9394517 9395759 -190234391 + Tigger3b DNA MER2_type 1 1231 0 437 199 4 45 chr5 9395759 9395767 -190234383 + (CATA)n Simple_repeat Simple_repeat 242 1421 0 1254 153 38 0 chr5 9395797 9396006 -190234144 - Tigger1 DNA MER2_type 0 2418 2202 1023 153 0 6 chr5 9395995 9396152 -190233998 - Tigger1 DNA MER2_type -2261 157 2 * 2051 174 11 6 chr5 9396665 9397028 -190233122 - MLT1A1 LTR MaLR 0 365 1 1989 222 80 34 chr5 9397190 9397806 -190232344 - LTR48B LTR ERV1 0 644 1 196 151 19 19 chr5 9397901 9397954 -190232196 + (TA)n Simple_repeat Simple_repeat 2 54 0 2358 118 30 28 chr5 9399754 9400117 -190230033 - THE1B LTR MaLR 0 364 1 1821 183 113 26 chr5 9401488 9401791 -190228359 + MLT1C LTR MaLR 9 359 -108 6261 90 37 3 chr5 9401791 9402821 -190227329 + L1PA11 LINE L1 5112 6173 -1 1821 183 113 26 chr5 9402821 9402933 -190227217 + MLT1C LTR MaLR 359 460 -7 504 271 129 78 chr5 9403187 9403560 -190226590 + MLT1J2 LTR MaLR 1 392 -58 772 247 86 0 chr5 9403591 9403765 -190226385 + MER63A DNA MER1_type 18 206 -4 460 299 64 5 chr5 9405246 9405450 -190224700 - L2 LINE L2 0 3313 3098 1990 132 54 40 chr5 9405762 9406132 -190224018 - THE1C LTR MaLR 0 375 1 205 301 206 19 chr5 9406882 9407091 -190223059 - MIR SINE MIR 0 262 15 2154 164 3 6 chr5 9407147 9407500 -190222650 - MLT1A1 LTR MaLR -13 352 1 1500 163 16 16 chr5 9407587 9407839 -190222311 - AluSx SINE Alu -25 287 36 876 221 77 10 chr5 9408268 9408476 -190221674 - MER58A DNA MER1_type 0 224 3 1571 232 13 33 chr5 9409251 9409447 -190220703 - MLT1B LTR MaLR -1 389 203 2493 116 16 8 chr5 9409447 9409819 -190220331 + THE1C LTR MaLR 1 375 0 1571 232 13 33 chr5 9409819 9410019 -190220131 - MLT1B LTR MaLR -187 203 1 187 177 0 51 chr5 9411584 9411663 -190218487 + (CCCG)n Simple_repeat Simple_repeat 2 76 0 208 263 168 0 chr5 9412213 9412308 -190217842 - L2 LINE L2 -23 3290 3180 285 165 0 3 chr5 9412353 9412439 -190217711 - MER3 DNA MER1_type 0 2585 2472 352 236 0 0 chr5 9412443 9412515 -190217635 - MER3 DNA MER1_type -95 114 43 246 293 0 13 chr5 9412602 9412677 -190217473 + L1ME3A LINE L1 6054 6127 -43 2302 120 24 24 chr5 9413907 9414281 -190215869 + THE1C LTR MaLR 2 375 0 256 256 176 24 chr5 9414333 9414458 -190215692 - LTR16C LTR ERVL -32 459 316 1794 86 3 111 chr5 9415112 9415247 -190214903 - MLT2A2 LTR ERVL 0 453 370 2189 93 75 9 chr5 9415247 9415580 -190214570 - THE1A LTR MaLR 0 355 1 1794 86 3 111 chr5 9415580 9415759 -190214391 - MLT2A2 LTR ERVL -83 370 173 562 258 72 70 chr5 9415775 9416291 -190213859 + L1MC5 LINE L1 7308 7824 -137 618 207 133 0 chr5 9416340 9416475 -190213675 - FRAM SINE Alu -9 157 5 1205 246 111 33 chr5 9416740 9417163 -190212987 - LTR65 LTR ERV1 -47 622 167 183 114 0 0 chr5 9417575 9417610 -190212540 + (T)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr5 9418019 9418047 -190212103 + AT_rich Low_complexity Low_complexity 1 28 0 183 274 68 14 chr5 9419323 9419396 -190210754 - MIR3 SINE MIR -31 177 101 245 243 40 0 chr5 9419435 9419509 -190210641 - MIR SINE MIR -6 256 180 29 0 0 0 chr5 9420068 9420097 -190210053 + AT_rich Low_complexity Low_complexity 1 29 0 488 259 7 34 chr5 9420434 9420581 -190209569 + L2 LINE L2 3167 3309 -4 944 246 89 32 chr5 9421590 9421903 -190208247 + MER93a LTR ERV1 70 400 -2 28 61 0 0 chr5 9422108 9422157 -190207993 + AT_rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr5 9422231 9422260 -190207890 + AT_rich Low_complexity Low_complexity 1 29 0 946 132 111 16 chr5 9423096 9423286 -190206864 + MER3 DNA MER1_type 1 208 -1 446 313 55 11 chr5 9423332 9423514 -190206636 - MIR SINE MIR -57 205 16 1438 170 4 0 chr5 9424209 9424444 -190205706 + MER46A DNA MER2_type 1 236 0 1030 144 76 79 chr5 9424548 9424663 -190205487 + L1MA8 LINE L1 6026 6140 -151 2259 109 3 3 chr5 9424663 9424975 -190205175 - AluSq SINE Alu 0 313 2 1030 144 76 79 chr5 9424975 9425140 -190205010 + L1MA8 LINE L1 6140 6285 -6 30 45 0 0 chr5 9425169 9425213 -190204937 + AT_rich Low_complexity Low_complexity 1 44 0 531 317 93 21 chr5 9425376 9425996 -190204154 + L1MC4a LINE L1 5298 5575 -725 207 0 0 0 chr5 9429026 9429049 -190201101 + (A)n Simple_repeat Simple_repeat 1 23 0 407 221 99 23 chr5 9429186 9429317 -190200833 - MIR SINE MIR -104 158 18 187 305 34 0 chr5 9430715 9430774 -190199376 - L2 LINE L2 0 3272 3212 181 319 115 18 chr5 9431243 9431356 -190198794 - MIR SINE MIR -98 164 41 213 132 26 0 chr5 9434459 9434497 -190195653 + (TATATG)n Simple_repeat Simple_repeat 2 40 0 617 239 17 33 chr5 9434767 9434947 -190195203 - MER5B DNA MER1_type -1 177 1 198 0 0 0 chr5 9435414 9435436 -190194714 + (T)n Simple_repeat Simple_repeat 1 22 0 718 223 217 0 chr5 9435539 9435723 -190194427 - MER58A DNA MER1_type 0 224 1 637 297 29 21 chr5 9437459 9437698 -190192452 + MIR SINE MIR 16 256 -6 22 35 0 0 chr5 9438191 9438220 -190191930 + AT_rich Low_complexity Low_complexity 1 29 0 876 211 83 5 chr5 9439232 9439436 -190190714 + MER58A DNA MER1_type 2 221 -3 849 50 0 0 chr5 9440211 9440311 -190189839 + AluSg/x SINE Alu 206 305 -7 534 234 0 8 chr5 9440460 9440584 -190189566 - LTR16A LTR ERVL -53 397 275 1111 347 86 33 chr5 9440630 9441593 -190188557 - ERVL LTR ERVL -2565 3199 2186 723 285 96 17 chr5 9441587 9441996 -190188154 - ERVL LTR ERVL -2917 2079 1619 * 627 310 76 14 chr5 9442000 9442355 -190187795 - ERVL LTR ERVL -4041 955 579 277 304 111 0 chr5 9442724 9442859 -190187291 - ERVL LTR ERVL -4846 150 1 1058 241 101 3 chr5 9442859 9443145 -190187005 - LTR16A LTR ERVL 0 450 137 451 248 9 0 chr5 9443435 9443540 -190186610 - MER3 DNA MER1_type -6 203 98 303 319 30 0 chr5 9444267 9444433 -190185717 + (TTGTG)n Simple_repeat Simple_repeat 4 174 0 186 235 153 35 chr5 9444645 9444719 -190185431 - MIR SINE MIR -65 143 56 1694 153 48 30 chr5 9444719 9445014 -190185136 + AluJb SINE Alu 1 300 -12 984 237 128 22 chr5 9445113 9445425 -190184725 + MER2 DNA MER2_type 1 345 0 27 29 0 0 chr5 9447068 9447102 -190183048 + AT_rich Low_complexity Low_complexity 1 34 0 279 104 0 0 chr5 9448359 9448407 -190181743 + (TA)n Simple_repeat Simple_repeat 2 49 0 306 216 0 0 chr5 9448535 9448609 -190181541 + (TG)n Simple_repeat Simple_repeat 2 75 0 231 87 0 0 chr5 9448609 9448655 -190181495 + LTR66 LTR ERVL 394 439 -171 381 306 86 63 chr5 9448879 9449101 -190181049 - L1MC/D LINE L1 -2019 5789 5563 25 31 0 0 chr5 9449696 9449728 -190180422 + AT_rich Low_complexity Low_complexity 1 32 0 24 67 0 0 chr5 9451392 9451437 -190178713 + AT_rich Low_complexity Low_complexity 1 45 0 207 0 0 0 chr5 9452115 9452138 -190178012 + (T)n Simple_repeat Simple_repeat 1 23 0 189 333 152 0 chr5 9452322 9452421 -190177729 - L2 LINE L2 -4 3268 3155 2469 57 7 0 chr5 9452588 9452885 -190177265 + AluY SINE Alu 3 301 -10 183 184 0 0 chr5 9454918 9454956 -190175194 + CT-rich Low_complexity Low_complexity 1 38 0 683 283 107 54 chr5 9455329 9455721 -190174429 + L2 LINE L2 2900 3312 -1 28 0 0 0 chr5 9456765 9456793 -190173357 + AT_rich Low_complexity Low_complexity 1 28 0 324 309 49 29 chr5 9458782 9458986 -190171164 + MER112 DNA MER1_type 53 260 0 278 232 254 17 chr5 9459307 9459484 -190170666 - L2 LINE L2 -1162 2152 1934 314 340 41 46 chr5 9459631 9459700 -190170450 - L2 LINE L2 -5 3267 3199 2005 153 95 5 chr5 9459700 9460091 -190170059 - MSTB LTR MaLR 0 426 1 314 340 41 46 chr5 9460091 9460215 -190169935 - L2 LINE L2 -73 3199 3075 306 163 70 35 chr5 9460226 9460312 -190169838 + MIR SINE MIR 172 260 -2 21 0 0 0 chr5 9461983 9462004 -190168146 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 9462452 9462475 -190167675 + AT_rich Low_complexity Low_complexity 1 23 0 536 269 105 45 chr5 9463373 9463658 -190166492 - L2 LINE L2 -73 3240 2903 3231 136 73 25 chr5 9463658 9464261 -190165889 - MER41B LTR ERV1 -1 634 3 536 269 105 45 chr5 9464261 9464413 -190165737 - L2 LINE L2 -410 2903 2762 1543 193 84 11 chr5 9464431 9464810 -190165340 - MER50 LTR ERV1 0 734 328 1550 205 92 49 chr5 9464818 9465234 -190164916 - L1MD3 LINE L1 -173 7822 7425 412 194 0 0 chr5 9465234 9465301 -190164849 - MLT1F1 LTR MaLR -456 111 45 1550 205 92 49 chr5 9465301 9465524 -190164626 - L1MD3 LINE L1 -570 7425 6874 375 250 17 17 chr5 9465738 9465858 -190164292 - L1MC3 LINE L1 -927 6858 6739 * 1970 228 2 4 chr5 9465855 9466321 -190163829 - L1MC3 LINE L1 -1798 5987 5523 637 213 94 35 chr5 9466321 9466523 -190163627 + MER97c DNA MER1_type? 374 587 -503 21 0 0 0 chr5 9467688 9467709 -190162441 + AT_rich Low_complexity Low_complexity 1 21 0 1617 206 0 8 chr5 9467718 9468091 -190162059 - L1MA4 LINE L1 -29 6271 5902 823 209 0 0 chr5 9468089 9468280 -190161870 - L1 LINE L1 -3221 3107 2917 * 6955 194 30 9 chr5 9468325 9470454 -190159696 - L1 LINE L1 -4065 1263 5 333 235 43 17 chr5 9470626 9470741 -190159409 + MER97b DNA MER1_type? 936 1053 0 23 54 0 0 chr5 9470847 9470884 -190159266 + AT_rich Low_complexity Low_complexity 1 37 0 225 224 20 0 chr5 9471145 9471194 -190158956 + (TATATG)n Simple_repeat Simple_repeat 4 53 0 180 200 0 0 chr5 9471571 9471611 -190158539 + (CTA)n Simple_repeat Simple_repeat 3 42 0 2358 112 27 33 chr5 9472095 9472461 -190157689 - THE1B LTR MaLR 0 364 1 11591 92 14 2 chr5 9472461 9474022 -190156128 - THE1B-int LTR MaLR 0 1580 1 2243 148 28 14 chr5 9474022 9474381 -190155769 - THE1B LTR MaLR 0 364 1 264 30 0 0 chr5 9475831 9475864 -190154286 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 272 339 74 83 chr5 9476039 9476473 -190153677 + L2 LINE L2 2842 3271 -1 248 302 129 72 chr5 9476533 9476851 -190153299 - L2 LINE L2 -6 3266 2931 2075 164 42 11 chr5 9477985 9478363 -190151787 - MLT1B LTR MaLR 0 390 1 2147 235 70 34 chr5 9478388 9479653 -190150497 - L1ME1 LINE L1 -5 6161 4858 729 200 8 0 chr5 9479671 9479796 -190150354 - Tigger2a DNA MER2_type -1 433 308 616 204 6 78 chr5 9479812 9479979 -190150171 - Tigger2a DNA MER2_type -279 155 1 6063 241 66 22 chr5 9479983 9480727 -190149423 - L1ME1 LINE L1 -1307 4839 4129 2570 71 0 0 chr5 9480727 9481036 -190149114 - AluY SINE Alu -2 309 1 6063 241 66 22 chr5 9481036 9482669 -190147481 - L1ME1 LINE L1 -2017 4129 2359 2630 169 55 3 chr5 9482784 9483440 -190146710 - L1MA4 LINE L1 -743 5403 4743 4404 140 12 65 chr5 9483440 9484356 -190145794 + L1MA4 LINE L1 5428 6294 -6 509 159 215 0 chr5 9485056 9485163 -190144987 - FLAM_A SINE Alu -3 130 1 385 274 76 32 chr5 9489046 9489203 -190140947 + MIR SINE MIR 86 249 -13 224 344 57 8 chr5 9489269 9489391 -190140759 + MIR SINE MIR 69 196 -66 21 36 0 0 chr5 9491906 9491934 -190138216 + AT_rich Low_complexity Low_complexity 1 28 0 4130 141 65 23 chr5 9492252 9493038 -190137112 + LTR1B LTR ERV1 1 819 -7 1763 164 3 9 chr5 9493151 9493475 -190136675 - L1MC/D LINE L1 -2034 5751 5430 236 224 0 26 chr5 9493787 9493819 -190136331 + T-rich Low_complexity Low_complexity 5 36 -42 1245 51 0 0 chr5 9493819 9493975 -190136175 - L1PA5 LINE L1 -1 6153 5998 236 224 0 26 chr5 9493975 9494018 -190136132 + T-rich Low_complexity Low_complexity 36 78 0 2181 122 81 57 chr5 9498005 9498240 -190131910 + MSTA LTR MaLR 1 252 -176 2284 68 0 4 chr5 9498240 9498521 -190131629 + AluY SINE Alu 28 307 -4 2181 122 81 57 chr5 9498521 9498703 -190131447 + MSTA LTR MaLR 252 428 0 252 122 0 0 chr5 9500622 9500663 -190129487 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 203 244 0 110 chr5 9503213 9503295 -190126855 - L2 LINE L2 -63 3209 3137 21 0 0 0 chr5 9503457 9503478 -190126672 + AT_rich Low_complexity Low_complexity 1 21 0 2235 107 3 3 chr5 9505849 9506148 -190124002 - AluSq SINE Alu -14 299 1 323 288 75 27 chr5 9506808 9506954 -190123196 + L1ME1 LINE L1 50 202 -5917 2243 118 3 0 chr5 9507130 9507435 -190122715 - AluSx SINE Alu -6 306 1 1139 266 57 36 chr5 9507625 9508350 -190121800 + L1ME1 LINE L1 1122 1898 -4412 2664 249 61 17 chr5 9508351 9509634 -190120516 + L1ME1 LINE L1 4808 6144 -5 2064 109 0 18 chr5 9509658 9509966 -190120184 + AluSg SINE Alu 1 303 0 859 194 66 0 chr5 9510102 9510313 -190119837 - L1M3 LINE L1 -856 5478 5254 667 182 35 0 chr5 9510346 9510489 -190119661 + L1 LINE L1 5099 5246 -900 5354 101 14 9 chr5 9511445 9512250 -190117900 - L1PA13 LINE L1 -8 6155 5347 1179 252 72 31 chr5 9512407 9512851 -190117299 + MLT1C LTR MaLR 1 462 -5 1375 206 23 30 chr5 9514213 9514514 -190115636 + AluJb SINE Alu 1 299 -13 2576 34 0 3 chr5 9517159 9517456 -190112694 - AluY SINE Alu -15 296 1 679 175 7 0 chr5 9517743 9517880 -190112270 - L1P5 LINE L1 -450 5706 5569 532 196 0 0 chr5 9517880 9517977 -190112173 + L1PB4 LINE L1 6055 6156 0 276 30 0 0 chr5 9518372 9518405 -190111745 + (TG)n Simple_repeat Simple_repeat 1 33 0 243 125 0 0 chr5 9518407 9518447 -190111703 + (GA)n Simple_repeat Simple_repeat 2 41 0 321 26 0 0 chr5 9518940 9518978 -190111172 + (TG)n Simple_repeat Simple_repeat 2 39 0 2455 76 0 0 chr5 9519018 9519309 -190110841 + AluSg SINE Alu 1 291 -19 319 49 0 0 chr5 9519705 9519746 -190110404 - AluY SINE Alu -261 47 7 422 327 186 4 chr5 9519765 9520028 -190110122 - L1ME LINE L1 -299 5822 5512 346 298 116 0 chr5 9520609 9520790 -190109360 - MLT1G3 LTR MaLR -174 356 155 1734 159 12 72 chr5 9521276 9521678 -190108472 - MLT1B LTR MaLR 0 390 13 295 309 11 0 chr5 9522025 9522119 -190108031 - L1ME LINE L1 -2255 3891 3797 2163 98 9 0 chr5 9522132 9522617 -190107533 - MER41A LTR ERV1 -107 528 1 221 276 0 0 chr5 9524132 9524190 -190105960 + (TA)n Simple_repeat Simple_repeat 2 59 0 241 233 27 0 chr5 9524201 9524274 -190105876 - L1MC4 LINE L1 -1344 6698 6624 8905 99 25 6 chr5 9524941 9526198 -190103952 - HSMAR1 DNA Mariner -3 1284 4 221 83 28 0 chr5 9526699 9526735 -190103415 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1531 230 53 45 chr5 9527743 9528235 -190101915 + MLT1D LTR MaLR 1 496 -9 241 323 16 48 chr5 9531222 9531346 -190098804 + L2 LINE L2 3193 3312 -1 192 372 99 33 chr5 9531383 9531504 -190098646 + MIR3 SINE MIR 53 181 -27 454 144 0 44 chr5 9531865 9531955 -190098195 - AluS SINE Alu -1 308 223 301 282 127 0 chr5 9532170 9532280 -190097870 + MER94 DNA DNA 11 134 0 2182 184 49 2 chr5 9533011 9533418 -190096732 + MSTB LTR MaLR 1 426 0 11232 49 1 1 chr5 9533589 9535757 -190094393 - L1PA5 LINE L1 -4 6150 3983 216 364 64 12 chr5 9536322 9536495 -190093655 + MIR SINE MIR 21 202 -60 2102 205 100 4 chr5 9536523 9537031 -190093119 + MER89 LTR ERV1 1 557 -2 384 219 117 16 chr5 9539368 9539496 -190090654 - MLT1K LTR MaLR -30 558 418 211 383 47 0 chr5 9539592 9539699 -190090451 + MIR SINE MIR 131 242 -20 611 111 11 0 chr5 9539902 9539992 -190090158 - AluSc SINE Alu -3 306 216 2508 122 8 3 chr5 9540299 9540661 -190089489 - THE1B LTR MaLR 0 364 1 228 297 44 0 chr5 9540835 9540926 -190089224 + MLT1J LTR MaLR 73 167 -344 1035 156 19 0 chr5 9540987 9541147 -190089003 + U1 snRNA snRNA 3 165 0 238 314 58 23 chr5 9541194 9541366 -190088784 + MLT1J LTR MaLR 236 413 -98 264 233 0 0 chr5 9541574 9541647 -190088503 + (CA)n Simple_repeat Simple_repeat 2 74 0 829 123 77 0 chr5 9542660 9542790 -190087360 + AluSg/x SINE Alu 155 294 -16 285 248 133 0 chr5 9542963 9543076 -190087074 - LTR16A LTR ERVL 0 450 323 1230 186 125 18 chr5 9543451 9543562 -190086588 + AluJb SINE Alu 1 99 -213 216 0 0 0 chr5 9543562 9543586 -190086564 + (CTA)n Simple_repeat Simple_repeat 1 24 0 1230 186 125 18 chr5 9543586 9543753 -190086397 + AluJb SINE Alu 99 309 -3 42 37 0 37 chr5 9543789 9543871 -190086279 + AT_rich Low_complexity Low_complexity 1 79 0 295 341 142 24 chr5 9545139 9545349 -190084801 - L2 LINE L2 -1378 1936 1752 256 31 0 0 chr5 9545349 9545381 -190084769 + (TTTG)n Simple_repeat Simple_repeat 2 92 0 2074 82 25 11 chr5 9545381 9545661 -190084489 - AluSx SINE Alu -1 315 1 295 341 142 24 chr5 9545661 9546035 -190084115 - L2 LINE L2 -1561 1753 1282 315 132 0 0 chr5 9546330 9546383 -190083767 - MSTC LTR MaLR -12 416 364 669 171 66 13 chr5 9546417 9546586 -190083564 - MSTC LTR MaLR -224 204 1 834 272 119 48 chr5 9547071 9547837 -190082313 - L1M4 LINE L1 -990 5156 4277 1764 203 7 47 chr5 9547837 9548241 -190081909 + MLT1B LTR MaLR 1 388 -2 834 272 119 48 chr5 9548241 9548640 -190081510 - L1M4 LINE L1 -1869 4277 3908 622 297 97 56 chr5 9548675 9549158 -190080992 - L1MCa LINE L1 -4064 2151 1768 342 335 5 5 chr5 9549194 9549385 -190080765 - L1MCa LINE L1 -4688 1708 1518 465 297 82 39 chr5 9549409 9549665 -190080485 + L1M4c LINE L1 1213 1479 -4905 31 26 0 0 chr5 9549800 9549838 -190080312 + AT_rich Low_complexity Low_complexity 1 38 0 211 325 90 32 chr5 9550021 9550168 -190079982 + MIR SINE MIR 19 169 -63 2060 149 0 0 chr5 9550758 9550773 -190079377 - AluSx SINE Alu -3 309 295 257 0 30 0 chr5 9550773 9550806 -190079344 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 2060 149 0 0 chr5 9550806 9551099 -190079051 - AluSx SINE Alu -16 296 1 383 268 96 19 chr5 9552806 9552963 -190077187 - MIR SINE MIR -46 216 48 268 337 22 17 chr5 9553241 9553402 -190076748 - MIR SINE MIR -60 148 9 1091 170 20 0 chr5 9553673 9553873 -190076277 - MLT1B LTR MaLR 0 390 187 357 321 30 0 chr5 9553873 9553952 -190076198 + GA-rich Low_complexity Low_complexity 2 88 -48 1784 171 26 20 chr5 9553952 9554257 -190075893 + AluJb SINE Alu 4 310 -2 357 321 30 0 chr5 9554257 9554308 -190075842 + GA-rich Low_complexity Low_complexity 88 136 0 671 174 81 19 chr5 9554355 9554516 -190075634 - MLT1B LTR MaLR -217 173 3 230 285 174 25 chr5 9557209 9557444 -190072706 + MLT1J2 LTR MaLR 53 322 -128 3417 151 16 71 chr5 9557537 9558268 -190071882 - LTR8 LTR ERV1 0 691 1 353 304 22 14 chr5 9558687 9558825 -190071325 + MIR SINE MIR 65 203 -59 223 331 72 22 chr5 9558958 9559097 -190071053 - L2 LINE L2 -192 3121 2976 277 169 84 28 chr5 9559252 9559323 -190070827 - MLT1B LTR MaLR -314 76 2 491 273 98 69 chr5 9559328 9559779 -190070371 - L2 LINE L2 -382 2932 2469 6914 153 39 6 chr5 9559781 9562034 -190068116 - L1MA8 LINE L1 -54 7656 5340 1708 166 15 207 chr5 9562034 9562763 -190067387 - MER21A LTR ERV1 -273 658 70 2961 192 40 38 chr5 9562931 9563146 -190067004 - L1MA8 LINE L1 -2264 5301 5088 1642 214 0 3 chr5 9563146 9563457 -190066693 - AluJb SINE Alu 0 310 1 2961 192 40 38 chr5 9563457 9564075 -190066075 - L1MA8 LINE L1 -2477 5088 4466 1090 244 174 16 chr5 9564071 9564808 -190065342 - L1MA8 LINE L1 -3792 3773 2919 * 1621 176 116 59 chr5 9564809 9565213 -190064937 + MSTC LTR MaLR 2 428 0 3514 247 102 109 chr5 9565215 9565645 -190064505 + MSTC-int LTR MaLR 2 434 -1301 1206 67 11 11 chr5 9565645 9565824 -190064326 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 704 134 0 0 chr5 9565826 9565923 -190064227 - AluSg/x SINE Alu -31 281 185 3514 247 102 109 chr5 9565923 9567140 -190063010 + MSTC-int LTR MaLR 435 1735 0 1687 184 44 49 chr5 9567140 9567547 -190062603 + MSTC LTR MaLR 1 405 -23 3144 229 285 22 chr5 9567551 9569764 -190060386 - L1M2 LINE L1 -4317 2790 1 862 185 42 21 chr5 9569767 9569956 -190060194 - MLT1D LTR MaLR -312 193 1 696 242 54 112 chr5 9570890 9571353 -190058797 + LTR40c LTR ERVL 1 436 -29 185 261 22 0 chr5 9571748 9571794 -190058356 - MIR SINE MIR -160 102 56 349 93 147 27 chr5 9571860 9571935 -190058215 + L1PB1 LINE L1 6067 6150 -1 2308 82 0 0 chr5 9572102 9572394 -190057756 - AluY SINE Alu -14 297 6 1500 209 16 33 chr5 9572964 9573073 -190057077 + MLT1A1 LTR MaLR 2 111 -254 2380 140 48 27 chr5 9573073 9573486 -190056664 - MSTB LTR MaLR 0 426 5 1500 209 16 33 chr5 9573486 9573744 -190056406 + MLT1A1 LTR MaLR 111 363 -2 207 255 20 0 chr5 9573799 9573850 -190056300 + GA-rich Low_complexity Low_complexity 3 54 0 183 323 10 42 chr5 9575451 9575547 -190054603 - MIR SINE MIR -71 191 99 188 247 108 11 chr5 9575771 9575864 -190054286 - MIR SINE MIR -86 122 21 331 151 41 0 chr5 9576346 9576419 -190053731 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 230 250 0 15 chr5 9576419 9576487 -190053663 - L1MC4 LINE L1 -1339 6703 6637 1320 271 58 23 chr5 9576822 9577240 -190052910 - L1M4 LINE L1 -2668 3478 3023 2177 109 14 0 chr5 9577240 9577533 -190052617 - AluSx SINE Alu -15 297 1 1320 271 58 23 chr5 9577533 9577822 -190052328 - L1M4 LINE L1 -3123 3023 2746 37 23 0 0 chr5 9577987 9578031 -190052119 + AT_rich Low_complexity Low_complexity 1 44 0 2884 226 53 7 chr5 9578162 9579042 -190051108 - L1MCa LINE L1 -2190 4236 3316 761 175 0 0 chr5 9579105 9579225 -190050925 + FLAM_C SINE Alu 5 124 -19 2978 218 60 42 chr5 9579270 9580400 -190049750 + L1M2 LINE L1 2098 3405 -4161 6019 200 70 20 chr5 9580405 9580604 -190049546 - L1MCa LINE L1 -4763 1663 1475 2569 115 13 8 chr5 9580604 9580977 -190049173 + THE1C LTR MaLR 1 375 0 6019 200 70 20 chr5 9580977 9582315 -190047835 - L1MCa LINE L1 -4951 1475 49 797 253 64 9 chr5 9582358 9582777 -190047373 - L1MEc LINE L1 -2955 3260 2819 620 257 70 63 chr5 9582798 9583729 -190046421 - L1MEc LINE L1 -3446 2769 1871 25 31 0 0 chr5 9583734 9583766 -190046384 + AT_rich Low_complexity Low_complexity 1 32 0 1066 219 99 44 chr5 9583789 9584242 -190045908 + Charlie1b DNA MER1_type 40 517 -6 417 292 64 9 chr5 9584281 9584500 -190045650 - L1MEc LINE L1 -4581 1815 1585 1638 206 30 30 chr5 9585553 9585918 -190044232 - MLT1A1 LTR MaLR 0 365 1 2823 10 0 0 chr5 9587676 9587984 -190042166 - AluY SINE Alu -3 308 1 2349 58 0 7 chr5 9587986 9588279 -190041871 - AluY SINE Alu -20 291 1 29 0 0 0 chr5 9588738 9588767 -190041383 + AT_rich Low_complexity Low_complexity 1 29 0 588 330 36 28 chr5 9588859 9589217 -190040933 - MLT1I LTR MaLR -2 407 47 4386 236 54 30 chr5 9589449 9590389 -190039761 - L1MDa LINE L1 -2296 4244 3328 1704 179 0 48 chr5 9590389 9590525 -190039625 + AluJo SINE Alu 1 142 -170 2167 107 19 10 chr5 9590525 9590834 -190039316 + AluSp SINE Alu 1 312 -1 1704 179 0 48 chr5 9590834 9591010 -190039140 + AluJo SINE Alu 142 298 -14 4386 236 54 30 chr5 9591010 9591887 -190038263 - L1MDa LINE L1 -3212 3328 2385 * 4451 223 99 81 chr5 9591855 9593918 -190036232 - L1MDa LINE L1 -4440 2100 1 342 279 29 29 chr5 9594006 9594110 -190036040 + MER5B DNA MER1_type 12 115 -63 23 0 0 0 chr5 9594612 9594635 -190035515 + AT_rich Low_complexity Low_complexity 1 23 0 216 313 36 24 chr5 9595210 9595293 -190034857 + L2 LINE L2 2677 2760 -554 201 194 48 29 chr5 9596232 9596335 -190033815 + (TTATA)n Simple_repeat Simple_repeat 4 108 0 776 122 76 15 chr5 9597004 9597135 -190033015 + MER85 DNA T2_type 1 139 0 643 123 0 0 chr5 9597775 9597856 -190032294 + AluS SINE Alu 2 82 -231 2933 94 10 5 chr5 9597872 9598274 -190031876 - HERVK9 LTR ERVK -5512 404 1 3337 88 4 67 chr5 9598274 9598784 -190031366 - MER9 LTR ERVK 0 511 34 2615 83 0 11 chr5 9598790 9599139 -190031011 + THE1B-int LTR MaLR 1236 1580 0 2086 159 25 27 chr5 9599139 9599504 -190030646 + THE1B LTR MaLR 1 364 0 1238 194 92 9 chr5 9599505 9599830 -190030320 - L1MCa LINE L1 -4865 1561 1210 180 0 0 0 chr5 9599844 9599864 -190030286 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 3198 168 11 13 chr5 9599864 9600402 -190029748 - L1PA15 LINE L1 -11 6154 5616 6042 223 33 13 chr5 9600419 9601921 -190028229 - L1PA13 LINE L1 -2734 4063 2532 2409 233 2 2 chr5 9601923 9602386 -190027764 - L1PA13 LINE L1 -6324 463 1 4405 200 13 17 chr5 9602414 9603313 -190026837 - L1MCa LINE L1 -5229 1197 302 875 186 56 0 chr5 9603986 9604147 -190026003 - MLT1A1 LTR MaLR 0 365 196 3498 28 0 0 chr5 9604147 9604544 -190025606 - L1PA4 LINE L1 -296 5859 5463 7403 68 9 1 chr5 9604904 9606135 -190024015 + L1PA8 LINE L1 4930 6168 -4 870 160 143 111 chr5 9606339 9606583 -190023567 - MLT1B LTR MaLR 0 390 139 2256 133 44 33 chr5 9606600 9606960 -190023190 + THE1B LTR MaLR 1 364 0 4605 88 7 2 chr5 9606960 9607570 -190022580 + THE1B-int LTR MaLR 1 613 -967 186 103 0 0 chr5 9607579 9607608 -190022542 + (A)n Simple_repeat Simple_repeat 1 29 0 341 306 57 0 chr5 9607734 9607858 -190022292 - L3 LINE CR1 -124 1453 1323 866 206 119 0 chr5 9608283 9608477 -190021673 + MER58A DNA MER1_type 7 223 -1 1922 114 21 25 chr5 9608595 9608875 -190021275 + AluSx SINE Alu 25 303 -9 196 350 49 7 chr5 9608903 9609046 -190021104 - L3 LINE CR1 -209 1368 1220 21 0 0 0 chr5 9610023 9610044 -190020106 + AT_rich Low_complexity Low_complexity 1 21 0 899 209 25 6 chr5 9610451 9610783 -190019367 + FRAM SINE Alu 1 199 0 795 80 40 23 chr5 9610794 9610969 -190019181 + GA-rich Low_complexity Low_complexity 1 178 0 243 79 0 0 chr5 9610975 9611013 -190019137 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 433 145 29 29 chr5 9611173 9611311 -190018839 + GA-rich Low_complexity Low_complexity 3 140 0 910 84 0 53 chr5 9611315 9611336 -190018814 + (GGAA)n Simple_repeat Simple_repeat 1 199 0 910 84 0 53 chr5 9611336 9611526 -190018624 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 210 307 64 45 chr5 9611574 9611776 -190018374 - L2 LINE L2 -1486 1828 1623 279 0 0 0 chr5 9612859 9612890 -190017260 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 351 368 78 59 chr5 9612907 9613331 -190016819 - L2 LINE L2 -13 3259 2828 242 246 35 18 chr5 9615923 9616037 -190014113 + (TA)n Simple_repeat Simple_repeat 2 117 0 21 36 0 0 chr5 9618532 9618560 -190011590 + AT_rich Low_complexity Low_complexity 1 28 0 345 288 96 0 chr5 9623000 9623125 -190007025 + MLT1F LTR MaLR 3 139 -403 2742 118 3 6 chr5 9624538 9624903 -190005247 - THE1B LTR MaLR 0 364 1 224 272 66 73 chr5 9625095 9625231 -190004919 + L2 LINE L2 2843 2977 -337 202 286 250 27 chr5 9625496 9625608 -190004542 + L2 LINE L2 3126 3262 -10 993 284 104 6 chr5 9625717 9626052 -190004098 - MLT1F LTR MaLR -174 368 1 409 254 46 56 chr5 9626079 9626276 -190003874 - MLT1F-int LTR MaLR -14 1357 1163 235 335 163 10 chr5 9626948 9627157 -190002993 + L3 LINE CR1 1241 1481 -96 364 275 53 23 chr5 9627171 9627302 -190002848 - L2 LINE L2 -4 3309 3175 206 129 61 38 chr5 9627358 9627490 -190002660 + (TA)n Simple_repeat Simple_repeat 2 136 0 4713 297 96 27 chr5 9627643 9628184 -190001966 - L2 LINE L2 -350 2964 2461 279 0 0 0 chr5 9628184 9628215 -190001935 + (TG)n Simple_repeat Simple_repeat 2 32 0 4713 297 96 27 chr5 9628215 9630055 -190000095 - L2 LINE L2 -853 2461 420 203 411 11 39 chr5 9630450 9630630 -189999520 + L3 LINE CR1 1369 1543 -34 1310 174 42 51 chr5 9631540 9631701 -189998449 - MER33 DNA MER1_type -2269 316 157 1706 56 0 0 chr5 9631701 9631928 -189998222 + AluY SINE Alu 86 312 0 1310 174 42 51 chr5 9631928 9632076 -189998074 - MER33 DNA MER1_type -2428 157 9 731 256 58 18 chr5 9632133 9632356 -189997794 - MIR SINE MIR 0 262 31 1718 57 13 44 chr5 9632421 9632650 -189997500 + AluY SINE Alu 79 300 -11 207 271 0 0 chr5 9633484 9633532 -189996618 + GA-rich Low_complexity Low_complexity 4 51 0 1779 162 18 30 chr5 9634135 9634469 -189995681 - THE1C LTR MaLR 0 375 46 225 191 0 0 chr5 9634471 9634518 -189995632 + L1P LINE L1 4326 4372 -1774 376 160 12 8 chr5 9634524 9634602 -189995548 - MSTA LTR MaLR -276 79 1 22 56 0 0 chr5 9634644 9634680 -189995470 + AT_rich Low_complexity Low_complexity 1 36 0 2081 110 3 7 chr5 9634957 9635247 -189994903 - AluSc SINE Alu -18 291 3 29 60 0 0 chr5 9635830 9635880 -189994270 + AT_rich Low_complexity Low_complexity 1 50 0 3097 216 49 10 chr5 9636093 9636824 -189993326 + L1 LINE L1 4194 4953 -1193 397 217 8 70 chr5 9636873 9637002 -189993148 + L2 LINE L2 3193 3313 0 744 194 106 17 chr5 9637176 9637413 -189992737 + MER58D DNA MER1_type 127 384 -2 434 221 69 8 chr5 9637423 9637554 -189992596 + L1M4 LINE L1 2955 3093 -3053 282 226 0 48 chr5 9637555 9637639 -189992511 + L1M4 LINE L1 3043 3122 -3024 22 0 0 0 chr5 9637795 9637817 -189992333 + AT_rich Low_complexity Low_complexity 1 22 0 3339 128 18 22 chr5 9637825 9638380 -189991770 - L1MA6 LINE L1 -6 6294 5742 250 310 62 9 chr5 9638691 9638804 -189991346 - MIR SINE MIR -1 261 143 196 109 22 22 chr5 9639353 9639399 -189990751 + (TA)n Simple_repeat Simple_repeat 2 47 0 382 331 78 9 chr5 9639401 9639732 -189990418 + L1ME3 LINE L1 5455 5825 -337 22 88 0 0 chr5 9639776 9639833 -189990317 + AT_rich Low_complexity Low_complexity 1 57 0 223 261 18 42 chr5 9640447 9640612 -189989538 + (TTG)n Simple_repeat Simple_repeat 3 163 0 254 257 16 44 chr5 9640830 9641013 -189989137 + (TTG)n Simple_repeat Simple_repeat 3 180 0 2385 86 0 16 chr5 9643623 9643937 -189986213 + AluY SINE Alu 1 309 -2 5051 167 16 6 chr5 9643980 9644836 -189985314 - MER49 LTR ERV1 -58 865 1 38529 34 20 4 chr5 9645272 9651295 -189978855 - L1PA3 LINE L1 0 6155 13 241 340 167 27 chr5 9652047 9652739 -189977411 - L2 LINE L2 -19 3253 2467 186 269 269 33 chr5 9653205 9653476 -189976674 - L2 LINE L2 -1215 2099 1765 2264 151 48 22 chr5 9654090 9654507 -189975643 - MSTA LTR MaLR 0 428 1 2666 190 40 2 chr5 9654515 9655016 -189975134 - MSTA-int LTR MaLR -8 1643 1124 977 155 0 7 chr5 9655117 9655272 -189974878 - MSTA-int LTR MaLR -505 1075 922 2476 18 0 0 chr5 9656179 9656452 -189973698 - AluYb8 SINE Alu -10 308 36 2371 89 3 0 chr5 9656585 9656889 -189973261 - AluSp SINE Alu -8 305 1 23 0 0 0 chr5 9659731 9659754 -189970396 + AT_rich Low_complexity Low_complexity 1 23 0 675 35 0 0 chr5 9659781 9659867 -189970283 + L1PA4 LINE L1 6067 6152 -3 2056 125 0 10 chr5 9660031 9660328 -189969822 - AluSg SINE Alu -16 294 1 346 223 11 43 chr5 9660716 9660810 -189969340 - MER8 DNA MER2_type -53 186 96 21 36 0 0 chr5 9661236 9661264 -189968886 + AT_rich Low_complexity Low_complexity 1 28 0 354 216 14 0 chr5 9661634 9661708 -189968442 + L1ME2 LINE L1 6075 6149 -15 999 213 42 42 chr5 9661728 9661967 -189968183 + MER8 DNA MER2_type 1 239 0 822 55 9 0 chr5 9662593 9662702 -189967448 - L1PA4 LINE L1 -3 6152 6043 599 253 78 60 chr5 9662714 9662820 -189967330 - L1M3a LINE L1 -4708 1688 1585 3815 115 21 2 chr5 9662820 9663394 -189966756 - L1PA15 LINE L1 -3 6162 5578 599 253 78 60 chr5 9663394 9663976 -189966174 - L1M3a LINE L1 -4811 1585 1011 2272 117 3 0 chr5 9664985 9665293 -189964857 - AluSg SINE Alu -1 309 1 1497 203 6 19 chr5 9665388 9665703 -189964447 - AluJo SINE Alu -1 311 1 433 260 86 88 chr5 9665791 9665882 -189964268 - L1M4 LINE L1 -1498 4648 4558 798 21 0 0 chr5 9665882 9665975 -189964175 - L1PA5 LINE L1 -6 6148 6056 433 260 86 88 chr5 9665975 9666267 -189963883 - L1M4 LINE L1 -1588 4558 4266 345 329 57 33 chr5 9666343 9666643 -189963507 - L1M4 LINE L1 -2922 3224 2893 24 53 0 0 chr5 9667288 9667326 -189962824 + AT_rich Low_complexity Low_complexity 1 38 0 1964 130 161 34 chr5 9667379 9667429 -189962721 - MSTA LTR MaLR 0 428 386 2150 106 21 58 chr5 9667429 9667805 -189962345 + THE1B LTR MaLR 3 364 0 1964 130 161 34 chr5 9667805 9668132 -189962018 - MSTA LTR MaLR -42 386 3 23 33 0 0 chr5 9668355 9668385 -189961765 + AT_rich Low_complexity Low_complexity 1 30 0 207 333 13 13 chr5 9669225 9669303 -189960847 + L2 LINE L2 3189 3266 -6 1215 194 22 86 chr5 9669365 9669689 -189960461 - MLT1B LTR MaLR 0 390 88 415 324 130 12 chr5 9670281 9670627 -189959523 - L1M4 LINE L1 -1621 4525 4139 189 107 0 0 chr5 9670649 9670677 -189959473 + (TATATG)n Simple_repeat Simple_repeat 6 33 0 436 273 10 11 chr5 9670725 9670900 -189959250 - L1M4 LINE L1 -2209 3937 3764 264 278 60 20 chr5 9672922 9673073 -189957077 - Charlie7 DNA MER1_type -22 2590 2434 1865 163 137 11 chr5 9674996 9675376 -189954774 + MSTA LTR MaLR 1 428 0 21 57 0 0 chr5 9676605 9676640 -189953510 + AT_rich Low_complexity Low_complexity 1 35 0 211 321 95 42 chr5 9677385 9677553 -189952597 - MIR SINE MIR -13 249 73 189 216 34 0 chr5 9677611 9677699 -189952451 + (TATATG)n Simple_repeat Simple_repeat 2 92 0 426 308 0 8 chr5 9677712 9677832 -189952318 + L2 LINE L2 1729 1847 -1467 697 231 36 32 chr5 9677849 9678070 -189952080 - L1M4 LINE L1 -1084 6481 6260 528 131 15 41 chr5 9678162 9678512 -189951638 + (TA)n Simple_repeat Simple_repeat 1 340 0 398 262 54 50 chr5 9678565 9678786 -189951364 - L1MA9 LINE L1 -74 6238 6017 544 204 91 11 chr5 9678797 9678983 -189951167 - L1M4 LINE L1 -1542 6023 5823 641 221 7 0 chr5 9679002 9679138 -189951012 + FRAM SINE Alu 38 174 -2 225 237 75 75 chr5 9679335 9679428 -189950722 - MIR SINE MIR -74 188 96 1766 179 18 25 chr5 9680607 9681003 -189949147 + L1 LINE L1 3608 4000 -2146 1657 288 53 21 chr5 9681038 9681575 -189948575 - L1M4 LINE L1 -4704 2861 2286 225 65 0 0 chr5 9681575 9681606 -189948544 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1657 288 53 21 chr5 9681606 9681895 -189948255 - L1M4 LINE L1 -5279 2286 2008 1793 265 52 42 chr5 9681966 9682663 -189947487 - L1M4 LINE L1 -6320 1169 466 203 337 63 11 chr5 9682962 9683057 -189947093 + MIR SINE MIR 163 262 0 2049 124 7 0 chr5 9683675 9683965 -189946185 + AluSx SINE Alu 1 292 -20 4321 119 17 22 chr5 9685664 9685894 -189944256 + L1MA2 LINE L1 5594 5824 -480 2108 114 7 13 chr5 9685894 9686202 -189943948 + AluSq SINE Alu 1 306 -7 4321 119 17 22 chr5 9686202 9686686 -189943464 + L1MA2 LINE L1 5824 6304 0 1444 105 81 0 chr5 9686718 9686966 -189943184 + L1MA1 LINE L1 6035 6302 0 424 95 24 0 chr5 9687200 9687284 -189942866 + (TA)n Simple_repeat Simple_repeat 1 86 0 2937 95 24 7 chr5 9687286 9687801 -189942349 - L1P5 LINE L1 -451 5700 5175 * 7963 220 21 19 chr5 9687794 9689916 -189940234 - L1 LINE L1 -1007 5139 3014 27 29 0 0 chr5 9691017 9691051 -189939099 + AT_rich Low_complexity Low_complexity 1 34 0 201 259 17 0 chr5 9692183 9692241 -189937909 + (TGAA)n Simple_repeat Simple_repeat 3 61 0 1193 232 26 53 chr5 9692768 9693108 -189937042 + MLT2C1 LTR ERVL 2 332 -65 501 89 40 0 chr5 9693129 9693230 -189936920 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 202 136 17 34 chr5 9693271 9693330 -189936820 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 1249 253 180 17 chr5 9693348 9693814 -189936336 - MLT1E LTR MaLR -51 542 1 23 0 0 0 chr5 9694315 9694338 -189935812 + AT_rich Low_complexity Low_complexity 1 23 0 224 211 34 41 chr5 9694378 9694525 -189935625 + (TTATA)n Simple_repeat Simple_repeat 3 148 0 470 196 130 0 chr5 9695986 9696124 -189934026 + L1MC3 LINE L1 6911 7066 -719 252 250 11 57 chr5 9696154 9696242 -189933908 + MLT1F1 LTR MaLR 25 108 -459 2310 189 83 12 chr5 9696246 9696824 -189933326 + L1MC2 LINE L1 6137 7747 0 2473 55 7 0 chr5 9698164 9698472 -189931678 + AluY SINE Alu 1 310 -1 1755 127 36 62 chr5 9699961 9700346 -189929804 - THE1C LTR MaLR 0 375 1 343 347 48 42 chr5 9701157 9701468 -189928682 - L1M4 LINE L1 -1035 5111 4799 524 28 0 28 chr5 9701504 9701575 -189928575 + (TTTC)n Simple_repeat Simple_repeat 4 72 0 1781 191 7 0 chr5 9701578 9701882 -189928268 - AluJb SINE Alu -6 306 1 333 318 86 18 chr5 9702141 9702421 -189927729 - L1M4 LINE L1 -1605 4541 4243 3050 178 27 25 chr5 9703609 9703770 -189926380 - MER50 LTR ERV1 -8 726 567 2169 108 0 0 chr5 9703770 9704068 -189926082 + AluSc SINE Alu 1 298 0 3050 178 27 25 chr5 9704068 9704545 -189925605 - MER50 LTR ERV1 -167 567 86 641 199 42 30 chr5 9704539 9704705 -189925445 - MER50 LTR ERV1 -566 168 1 * 2096 160 22 75 chr5 9706801 9706886 -189923264 + MLT1C LTR MaLR 1 89 -378 2224 99 6 13 chr5 9706886 9707200 -189922950 - AluSp SINE Alu -1 312 1 2096 160 22 75 chr5 9707200 9707607 -189922543 + MLT1C LTR MaLR 89 467 0 21 0 0 0 chr5 9708081 9708102 -189922048 + AT_rich Low_complexity Low_complexity 1 21 0 726 216 13 65 chr5 9708518 9708615 -189921535 + L1MB8 LINE L1 5951 6051 -127 1248 206 68 84 chr5 9708615 9709126 -189921024 + MLT1D LTR MaLR 1 503 -2 726 216 13 65 chr5 9709126 9709259 -189920891 + L1MB8 LINE L1 6051 6169 -9 21 0 0 0 chr5 9709288 9709309 -189920841 + AT_rich Low_complexity Low_complexity 1 21 0 318 295 129 14 chr5 9709546 9709617 -189920533 + L1ME1 LINE L1 5257 5318 -924 1983 89 19 4 chr5 9709617 9709888 -189920262 + AluSq SINE Alu 39 313 0 318 295 129 14 chr5 9709888 9709955 -189920195 + L1ME1 LINE L1 5318 5411 -831 362 268 36 0 chr5 9709955 9710067 -189920083 + L1ME1 LINE L1 6039 6154 -12 545 273 51 16 chr5 9710108 9710361 -189919789 + L1MC5 LINE L1 6978 7239 -722 1828 144 33 0 chr5 9710880 9711176 -189918974 - AluSc SINE Alu 0 305 1 3130 164 25 3 chr5 9711657 9712249 -189917901 + L1MA6 LINE L1 5696 6300 0 1973 41 0 4 chr5 9714195 9714497 -189915653 + L1PA4 LINE L1 5895 6155 0 380 288 50 31 chr5 9714850 9715010 -189915140 - MIR SINE MIR -70 192 30 1398 171 14 27 chr5 9715348 9715640 -189914510 + MLT2C2 LTR ERVL 2 289 -175 1274 79 23 0 chr5 9715671 9715848 -189914302 + THE1C LTR MaLR 1 181 -194 721 219 92 15 chr5 9715907 9716103 -189914047 + L1MC2 LINE L1 6109 6319 -25 703 177 65 16 chr5 9716321 9716507 -189913643 + MER58 DNA MER1_type 2 196 -2224 428 217 11 0 chr5 9716510 9716602 -189913548 + MER58 DNA MER1_type 2325 2417 -3 * 905 343 43 16 chr5 9716602 9717151 -189912999 + Zaphod DNA AcHobo 48 611 -3420 234 281 11 0 chr5 9717396 9717485 -189912665 + L1P2 LINE L1 5710 5799 -355 2423 51 0 10 chr5 9718963 9719257 -189910893 + AluY SINE Alu 13 303 -8 35604 36 25 1 chr5 9720092 9725620 -189904530 + L1PA3 LINE L1 1 6176 0 4786 244 100 18 chr5 9725675 9727679 -189902471 - L1PA13 LINE L1 -4003 2794 617 395 156 0 0 chr5 9727686 9727750 -189902400 - L1PA13 LINE L1 -6723 64 1 1249 240 72 33 chr5 9727759 9728340 -189901810 - L1M4 LINE L1 -749 5397 4787 2057 154 0 6 chr5 9728340 9728652 -189901498 - AluSx SINE Alu -2 310 1 1249 240 72 33 chr5 9728652 9728711 -189901439 - L1M4 LINE L1 -1359 4787 4732 1523 210 0 52 chr5 9729109 9729418 -189900732 - AluJo SINE Alu -17 295 3 9313 104 20 7 chr5 9729689 9730233 -189899917 + L1PA7 LINE L1 3897 4433 -1713 290 45 23 0 chr5 9730233 9730277 -189899873 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 9313 104 20 7 chr5 9730277 9731216 -189898934 + L1PA7 LINE L1 4433 5399 -747 947 114 0 0 chr5 9731216 9731339 -189898811 + AluSg SINE Alu 1 123 -187 624 110 0 0 chr5 9731359 9731450 -189898700 + L1PA7 LINE L1 5386 5476 -678 5319 76 4 3 chr5 9731481 9731505 -189898645 + L1PA7 LINE L1 5438 5460 -694 195 69 0 0 chr5 9731505 9731534 -189898616 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5319 76 4 3 chr5 9731534 9732220 -189897930 + L1PA7 LINE L1 5460 6149 -5 30 0 0 0 chr5 9732220 9732250 -189897900 + AT_rich Low_complexity Low_complexity 1 30 0 699 244 114 0 chr5 9732561 9732762 -189897388 + MER58A DNA MER1_type 1 224 0 25 65 0 0 chr5 9732980 9733026 -189897124 + AT_rich Low_complexity Low_complexity 1 46 0 378 281 79 31 chr5 9733234 9733462 -189896688 + L1M4 LINE L1 4528 4766 -1380 656 250 83 10 chr5 9733480 9733684 -189896466 + MER20 DNA MER1_type 1 219 0 23 33 0 0 chr5 9734125 9734155 -189895995 + AT_rich Low_complexity Low_complexity 1 30 0 4152 151 17 6 chr5 9735181 9735884 -189894266 + MER50 LTR ERV1 1 711 -23 225 270 150 10 chr5 9737091 9737191 -189892959 - MER5A DNA MER1_type -73 116 3 2336 104 0 0 chr5 9737720 9738018 -189892132 + AluSg SINE Alu 3 300 -10 1091 197 140 9 chr5 9738373 9738688 -189891462 + MLT1A1 LTR MaLR 10 365 0 188 81 48 65 chr5 9739978 9740040 -189890110 + (TCTCTG)n Simple_repeat Simple_repeat 6 66 0 211 315 62 23 chr5 9740092 9740222 -189889928 - MIR SINE MIR -71 191 57 227 114 23 0 chr5 9740293 9740337 -189889813 + (TA)n Simple_repeat Simple_repeat 2 46 0 203 407 68 0 chr5 9740738 9740856 -189889294 - L2 LINE L2 0 3272 3147 338 233 14 0 chr5 9741023 9741096 -189889054 - MIR SINE MIR -76 186 113 596 332 42 14 chr5 9741103 9741317 -189888833 + MIR SINE MIR 5 224 -38 708 250 96 33 chr5 9741331 9741717 -189888433 + MLT1C LTR MaLR 2 464 -3 591 282 88 12 chr5 9742853 9743508 -189886642 + L1MEc LINE L1 1702 2474 -3922 518 319 65 4 chr5 9743747 9743976 -189886174 - HAL1 LINE L1 -1908 599 357 539 192 33 0 chr5 9744008 9744128 -189886022 - MLT2E LTR ERVL -1 627 504 2315 209 31 45 chr5 9744248 9744869 -189885281 + MER90 LTR ERV1 3 614 0 512 214 71 0 chr5 9744970 9745110 -189885040 + L1MEc LINE L1 1941 2090 -4306 303 307 45 25 chr5 9745370 9745572 -189884578 - HAL1 LINE L1 -2275 232 27 317 227 152 8 chr5 9745972 9746104 -189884046 - MER58C DNA MER1_type -11 204 54 42 57 0 0 chr5 9746717 9746787 -189883363 + AT_rich Low_complexity Low_complexity 1 70 0 32 0 0 0 chr5 9748105 9748137 -189882013 + AT_rich Low_complexity Low_complexity 1 32 0 388 193 18 0 chr5 9748886 9748995 -189881155 + (TA)n Simple_repeat Simple_repeat 1 111 0 316 277 69 15 chr5 9749000 9749130 -189881020 + MER106B DNA MER1_type 923 1059 0 23 86 0 0 chr5 9749433 9749491 -189880659 + AT_rich Low_complexity Low_complexity 1 58 0 310 385 40 6 chr5 9749562 9749736 -189880414 - MIR SINE MIR -71 191 12 1783 119 15 4 chr5 9749768 9750029 -189880121 + AluSx SINE Alu 39 302 -10 203 417 45 15 chr5 9752034 9752166 -189877984 - MIR3 SINE MIR -71 137 2 2790 140 63 2 chr5 9753779 9754223 -189875927 - LOR1a LTR ERV1 -8 489 19 387 297 59 50 chr5 9754364 9754584 -189875566 - MIR3 SINE MIR -26 236 14 922 205 16 11 chr5 9754629 9754819 -189875331 + MLT2D LTR ERVL 6 196 -218 411 272 10 0 chr5 9754843 9754946 -189875204 + MLT2D LTR ERVL 377 480 -40 230 211 126 32 chr5 9754958 9755053 -189875097 - LTR66 LTR ERVL -171 439 336 249 282 45 18 chr5 9755200 9755310 -189874840 + L1M4 LINE L1 3656 3768 -2378 24 0 0 0 chr5 9755351 9755375 -189874775 + AT_rich Low_complexity Low_complexity 1 24 0 2053 138 164 11 chr5 9755484 9755855 -189874295 - MSTA LTR MaLR 0 428 1 643 305 181 25 chr5 9755904 9756495 -189873655 + L1M4 LINE L1 3606 4288 -1858 21 0 0 0 chr5 9756545 9756566 -189873584 + AT_rich Low_complexity Low_complexity 1 21 0 2274 103 0 22 chr5 9757856 9758167 -189871983 + AluSq SINE Alu 1 304 -9 2223 96 7 0 chr5 9758168 9758470 -189871680 + L1PA14 LINE L1 5856 6159 -2 247 366 0 0 chr5 9758861 9758962 -189871188 + L2 LINE L2 3208 3308 -5 415 325 33 4 chr5 9760036 9760222 -189869928 - MLT1H LTR MaLR -15 534 347 406 313 27 0 chr5 9760848 9760995 -189869155 - MLT1J2 LTR MaLR -195 255 105 582 277 15 42 chr5 9761008 9761268 -189868882 + L1ME3A LINE L1 5917 6169 -1 1119 167 8 41 chr5 9761286 9761455 -189868695 + L1ME LINE L1 5192 5352 -814 1340 193 77 11 chr5 9761455 9761729 -189868421 + AluJb SINE Alu 1 292 -20 1119 167 8 41 chr5 9761729 9761844 -189868306 + L1ME LINE L1 5352 5469 -697 24 32 0 0 chr5 9762764 9762795 -189867355 + AT_rich Low_complexity Low_complexity 1 31 0 1982 141 63 30 chr5 9764306 9764669 -189865481 - THE1C LTR MaLR 0 375 1 1622 178 57 48 chr5 9765098 9765120 -189865030 + MLT1A2 LTR MaLR 1 21 -353 2659 136 30 30 chr5 9765120 9765547 -189864603 + MSTA LTR MaLR 1 427 -1 1622 178 57 48 chr5 9765547 9765614 -189864536 + MLT1A2 LTR MaLR 21 86 -288 1498 196 94 24 chr5 9765614 9765955 -189864195 - MLT1A1 LTR MaLR 0 365 1 1622 178 57 48 chr5 9765955 9766235 -189863915 + MLT1A2 LTR MaLR 86 374 0 1450 170 0 8 chr5 9767458 9767705 -189862445 - L1MA10 LINE L1 -2 6332 6088 1042 156 50 6 chr5 9767706 9767885 -189862265 + MSTA LTR MaLR 1 187 -241 843 83 0 0 chr5 9767894 9768003 -189862147 + MSTA LTR MaLR 320 428 0 2545 200 32 6 chr5 9768022 9768521 -189861629 - L1MB1 LINE L1 -119 6070 5559 329 182 47 12 chr5 9769271 9769441 -189860709 + (TG)n Simple_repeat Simple_repeat 1 176 0 556 91 27 59 chr5 9769477 9769663 -189860487 + (TG)n Simple_repeat Simple_repeat 1 180 0 281 184 29 29 chr5 9769774 9769948 -189860202 + (TG)n Simple_repeat Simple_repeat 1 174 0 482 155 39 13 chr5 9769967 9770203 -189859947 + (TG)n Simple_repeat Simple_repeat 1 242 0 768 0 0 0 chr5 9771002 9771089 -189859061 - L1HS LINE L1 -2 6153 6067 2374 158 27 54 chr5 9773064 9773365 -189856785 - MLT1C LTR MaLR 0 467 182 1565 189 10 30 chr5 9773365 9773667 -189856483 - AluJo SINE Alu -16 296 1 2374 158 27 54 chr5 9773667 9773845 -189856305 - MLT1C LTR MaLR -285 182 1 23 33 0 0 chr5 9775565 9775595 -189854555 + AT_rich Low_complexity Low_complexity 1 30 0 4185 134 46 65 chr5 9776002 9776802 -189853348 + LTR1 LTR ERV1 1 785 0 425 329 22 36 chr5 9776977 9777202 -189852948 + MIR SINE MIR 29 250 -12 1522 148 19 11 chr5 9777406 9777676 -189852474 + L1MA8 LINE L1 6013 6284 -7 2548 84 0 0 chr5 9777730 9778041 -189852109 - AluSx SINE Alu -1 311 1 2455 170 34 5 chr5 9778692 9779139 -189851011 + L1MA4 LINE L1 5426 5885 -415 * 30560 115 7 22 chr5 9779137 9785294 -189844856 + L1PA7 LINE L1 316 6469 0 233 242 81 0 chr5 9785588 9785650 -189844500 + MIR SINE MIR 90 156 -106 1622 183 17 56 chr5 9785727 9786083 -189844067 + MLT1B LTR MaLR 1 342 -48 2068 115 26 50 chr5 9786083 9786583 -189843567 - MER51B LTR ERV1 0 377 1 379 135 0 0 chr5 9786583 9786635 -189843515 + MLT1B LTR MaLR 339 390 0 21 0 0 0 chr5 9787177 9787198 -189842952 + AT_rich Low_complexity Low_complexity 1 21 0 199 250 95 24 chr5 9788292 9788376 -189841774 - L3 LINE CR1 -881 696 607 451 300 137 23 chr5 9788627 9788934 -189841216 - LTR16A LTR ERVL -5 445 104 28 29 0 0 chr5 9789471 9789506 -189840644 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr5 9789652 9789695 -189840455 + AT_rich Low_complexity Low_complexity 1 43 0 200 315 12 30 chr5 9790391 9790526 -189839624 - MIR3 SINE MIR -53 155 23 3077 164 25 2 chr5 9792755 9793272 -189836878 - Tigger1 DNA MER2_type 0 2418 1890 1041 191 56 72 chr5 9793296 9793600 -189836550 - PABL_B LTR ERV1 -23 644 346 375 327 28 60 chr5 9793604 9793821 -189836329 - PABL_B LTR ERV1 -457 210 1 5940 133 7 14 chr5 9793821 9794742 -189835408 - Tigger1 DNA MER2_type -534 1884 971 2484 84 0 0 chr5 9794986 9795296 -189834854 - AluY SINE Alu -1 310 1 4303 91 10 15 chr5 9795300 9795884 -189834266 - L1PA10 LINE L1 0 6168 5588 1925 136 58 14 chr5 9795884 9796420 -189833730 + L1PA10 LINE L1 4996 5558 -610 1215 237 159 0 chr5 9796599 9796971 -189833179 - MER74C LTR ERVL -27 433 3 192 77 0 0 chr5 9796971 9796997 -189833153 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 285 223 0 0 chr5 9797791 9797885 -189832265 + (TA)n Simple_repeat Simple_repeat 2 95 0 217 267 40 79 chr5 9797902 9798003 -189832147 + MIR3 SINE MIR 77 173 -35 594 227 31 12 chr5 9799537 9799700 -189830450 - L1MA10 LINE L1 -1 6333 6168 1574 204 106 31 chr5 9799708 9800096 -189830054 - L1MA9 LINE L1 -2 6310 5894 23 33 0 0 chr5 9800181 9800211 -189829939 + AT_rich Low_complexity Low_complexity 1 30 0 297 250 0 0 chr5 9801520 9801580 -189828570 + MER81 DNA DNA 29 88 -26 230 219 0 0 chr5 9803373 9803414 -189826736 + (TG)n Simple_repeat Simple_repeat 2 42 0 1369 265 20 6 chr5 9804075 9804433 -189825717 - MER89 LTR ERV1 0 559 197 496 161 23 0 chr5 9804406 9804493 -189825657 - MER89 LTR ERV1 -470 89 1 * 2291 98 0 0 chr5 9805630 9805926 -189824224 + AluSq SINE Alu 1 296 -17 410 226 11 11 chr5 9809215 9809308 -189820842 - LTR16B LTR ERVL 0 464 372 279 301 188 19 chr5 9809317 9809626 -189820524 - L2 LINE L2 -1091 2223 1863 271 342 124 29 chr5 9809638 9809913 -189820237 - L2 LINE L2 -2782 532 232 43 20 0 0 chr5 9811596 9811646 -189818504 + AT_rich Low_complexity Low_complexity 1 50 0 1643 142 22 4 chr5 9811647 9811915 -189818235 - L1MA5A LINE L1 -4 6293 6021 558 281 18 4 chr5 9812028 9812227 -189817923 + L1MEc LINE L1 2062 2230 -4196 23 0 0 0 chr5 9812439 9812462 -189817688 + AT_rich Low_complexity Low_complexity 1 23 0 306 342 94 58 chr5 9813962 9814097 -189816053 - L2 LINE L2 0 3272 3143 2298 181 19 9 chr5 9814097 9814516 -189815634 + L1MA5 LINE L1 5871 6293 -7 306 342 94 58 chr5 9814516 9814743 -189815407 - L2 LINE L2 -129 3143 2897 396 145 0 9 chr5 9814914 9815002 -189815148 + L1PB4 LINE L1 5703 5788 -366 296 171 26 40 chr5 9815011 9815163 -189814987 + (TA)n Simple_repeat Simple_repeat 1 150 0 802 170 26 5 chr5 9815174 9815326 -189814824 + L1PB4 LINE L1 5759 5908 -248 5336 181 34 36 chr5 9815352 9816947 -189813203 - L1P5 LINE L1 -537 5617 4007 658 213 19 0 chr5 9816933 9817093 -189813057 + L1P5 LINE L1 3844 4006 -2140 * 672 268 33 22 chr5 9818330 9818513 -189811637 + MER5A DNA MER1_type 5 189 0 464 36 0 0 chr5 9818660 9818715 -189811435 - L1P LINE L1 -742 5413 5359 6607 29 7 0 chr5 9818715 9819439 -189810711 + L1PA3 LINE L1 5417 6152 -3 2475 72 0 0 chr5 9819812 9820104 -189810046 + AluY SINE Alu 1 292 -19 468 347 66 19 chr5 9820172 9820443 -189809707 - L2 LINE L2 -619 2695 2412 1848 186 3 43 chr5 9820975 9821030 -189809120 + MLT1A1 LTR MaLR 31 87 -278 1739 161 13 26 chr5 9821030 9821340 -189808810 + AluSx SINE Alu 1 306 -6 1848 186 3 43 chr5 9821340 9821633 -189808517 + MLT1A1 LTR MaLR 87 365 0 1575 190 196 0 chr5 9823571 9823929 -189806221 + MSTA LTR MaLR 1 428 0 199 321 75 22 chr5 9824012 9824146 -189806004 - MIR SINE MIR -3 259 119 399 41 0 0 chr5 9824390 9824439 -189805711 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 1860 142 17 3 chr5 9824585 9824874 -189805276 - AluSx SINE Alu -19 293 1 441 138 15 0 chr5 9824918 9824983 -189805167 + AluS SINE Alu 2 67 -246 3820 64 2 0 chr5 9825678 9826133 -189804017 - L1PA7 LINE L1 -4 6150 5695 464 104 0 0 chr5 9826138 9826205 -189803945 - L1P LINE L1 -3167 2979 2913 296 348 65 0 chr5 9826568 9826706 -189803444 + MIR SINE MIR 87 233 -29 261 57 0 0 chr5 9828569 9828604 -189801546 + (TG)n Simple_repeat Simple_repeat 1 35 0 1151 261 118 52 chr5 9831190 9831672 -189798478 - MER90 LTR ERV1 -9 605 92 4155 33 0 0 chr5 9832068 9832556 -189797594 - L1PA2 LINE L1 -1219 4927 4440 8375 12 0 2 chr5 9832556 9833780 -189796370 + L1PA2 LINE L1 4934 6155 0 2139 111 0 10 chr5 9833801 9834098 -189796052 + AluSg SINE Alu 1 294 -16 304 287 42 48 chr5 9834974 9835141 -189795009 + L2 LINE L2 2834 2999 -273 1662 237 121 29 chr5 9835872 9836328 -189793822 - MLT2B1 LTR ERVL -10 510 13 767 188 227 0 chr5 9836469 9836645 -189793505 - MER20 DNA MER1_type -3 216 1 1091 242 81 20 chr5 9836653 9836950 -189793200 + MER119 DNA MER1_type 1 315 -268 527 269 15 0 chr5 9836984 9837118 -189793032 + MER119 DNA MER1_type 448 583 0 1838 127 3 45 chr5 9837682 9838018 -189792132 + AluSx SINE Alu 3 326 0 903 291 107 46 chr5 9838305 9838830 -189791320 + MLT1G1 LTR MaLR 3 559 -36 624 259 74 54 chr5 9838962 9839259 -189790891 - LTR33A LTR ERVL 0 523 221 1720 102 33 126 chr5 9839262 9839596 -189790554 - AluSq SINE Alu -10 303 1 1469 341 26 39 chr5 9840833 9841294 -189788856 + L1PA14 LINE L1 5705 6159 -2 247 366 0 0 chr5 9841685 9841786 -189788364 + L2 LINE L2 3208 3308 -5 415 325 33 4 chr5 9842859 9843045 -189787105 - MLT1J2 LTR MaLR -15 534 347 434 316 26 0 chr5 9843664 9843819 -189786331 - MLT1J2 LTR MaLR -187 263 105 582 277 15 42 chr5 9843832 9844092 -189786058 + L1ME3A LINE L1 5917 6169 -1 1163 159 8 41 chr5 9844110 9844279 -189785871 + L1ME LINE L1 5192 5352 -814 1340 193 77 11 chr5 9844279 9844553 -189785597 + AluJb SINE Alu 1 292 -20 1163 159 8 41 chr5 9844553 9844668 -189785482 + L1ME LINE L1 5352 5469 -697 24 32 0 0 chr5 9845588 9845619 -189784531 + AT_rich Low_complexity Low_complexity 1 31 0 1982 141 63 30 chr5 9847130 9847493 -189782657 - THE1C LTR MaLR 0 375 1 1622 178 57 48 chr5 9847922 9847944 -189782206 + MLT1A2 LTR MaLR 1 21 -353 2665 136 30 28 chr5 9847944 9848370 -189781780 + MSTA LTR MaLR 1 427 -1 1622 178 57 48 chr5 9848370 9848437 -189781713 + MLT1A2 LTR MaLR 21 86 -288 1498 196 94 24 chr5 9848437 9848778 -189781372 - MLT1A1 LTR MaLR 0 365 1 1622 178 57 48 chr5 9848778 9849058 -189781092 + MLT1A2 LTR MaLR 86 374 0 1450 170 0 8 chr5 9850281 9850528 -189779622 - L1MA10 LINE L1 -2 6332 6088 1042 156 50 6 chr5 9850529 9850708 -189779442 + MSTA LTR MaLR 1 187 -241 843 83 0 0 chr5 9850717 9850826 -189779324 + MSTA LTR MaLR 320 428 0 2309 200 32 6 chr5 9850845 9851344 -189778806 - L1MB1 LINE L1 -119 6070 5559 299 188 41 18 chr5 9852094 9852264 -189777886 + (TG)n Simple_repeat Simple_repeat 1 174 0 556 91 27 59 chr5 9852300 9852486 -189777664 + (TG)n Simple_repeat Simple_repeat 1 180 0 281 184 29 29 chr5 9852597 9852771 -189777379 + (TG)n Simple_repeat Simple_repeat 1 174 0 482 155 39 13 chr5 9852790 9853026 -189777124 + (TG)n Simple_repeat Simple_repeat 1 242 0 536 170 7 85 chr5 9854255 9854325 -189775825 + MLT1D LTR MaLR 376 431 -74 2011 160 0 0 chr5 9854325 9854637 -189775513 - AluSx SINE Alu 0 312 1 536 170 7 85 chr5 9854637 9854707 -189775443 + MLT1D LTR MaLR 431 505 0 2794 114 18 5 chr5 9855289 9855727 -189774423 + L1PB2 LINE L1 5705 6148 -3 19769 58 0 7 chr5 9856928 9860281 -189769869 + L1PA6 LINE L1 2805 6148 -6 661 154 8 8 chr5 9860342 9860472 -189769678 + CT-rich Low_complexity Low_complexity 3 132 0 21 36 0 0 chr5 9861681 9861709 -189768441 + AT_rich Low_complexity Low_complexity 1 28 0 499 277 114 42 chr5 9862616 9862923 -189767227 - LTR16B LTR ERVL -135 329 1 542 261 0 0 chr5 9864081 9864200 -189765950 + Tigger3(Golem) DNA MER2_type 2 120 -2909 1188 227 109 91 chr5 9866278 9866904 -189763246 - MLT1E1 LTR MaLR 0 654 18 452 282 18 72 chr5 9867018 9867295 -189762855 - MLT1E1-int LTR MaLR -141 1230 969 1961 79 4 0 chr5 9867305 9867559 -189762591 - AluY SINE Alu 0 311 57 259 266 21 63 chr5 9867936 9868079 -189762071 + MER65B LTR ERV1 1 137 -394 2357 52 10 0 chr5 9869211 9869499 -189760651 + AluY SINE Alu 1 291 -20 365 0 22 0 chr5 9869508 9869553 -189760597 + (TAAAA)n Simple_repeat Simple_repeat 1 46 0 3123 169 53 46 chr5 9870061 9871040 -189759110 - L1MA8 LINE L1 -684 5607 4634 2406 181 45 22 chr5 9871041 9871643 -189758507 + L1MA8 LINE L1 5617 6232 -59 22 56 0 0 chr5 9872299 9872335 -189757815 + AT_rich Low_complexity Low_complexity 1 36 0 429 316 49 49 chr5 9872994 9873238 -189756912 - MIR SINE MIR 0 262 19 247 274 62 84 chr5 9873429 9873608 -189756542 + HAL1 LINE L1 2 176 -2331 692 285 92 15 chr5 9873642 9874108 -189756042 - MER20B DNA MER1_type -1 782 281 313 278 62 0 chr5 9874170 9874267 -189755883 + HAL1 LINE L1 1548 1650 -857 2342 103 0 10 chr5 9874781 9875092 -189755058 - AluSq SINE Alu -5 308 1 1216 233 11 32 chr5 9875301 9875649 -189754501 + MLT2C1 LTR ERVL 3 343 -54 813 105 29 6 chr5 9875649 9875821 -189754329 + (TCTA)n Simple_repeat Simple_repeat 2 177 0 566 244 76 0 chr5 9877311 9877483 -189752667 - MER5A DNA MER1_type -3 186 2 21 57 0 0 chr5 9877873 9877908 -189752242 + AT_rich Low_complexity Low_complexity 1 35 0 228 379 9 26 chr5 9878627 9878743 -189751407 - MER5A DNA MER1_type -9 180 67 2240 271 52 11 chr5 9878822 9879490 -189750660 + L1M1 LINE L1 17 712 -6853 1742 135 14 14 chr5 9879484 9879781 -189750369 + L1P3 LINE L1 1 297 -5578 * 5444 126 24 27 chr5 9879883 9880902 -189749248 + L1P3 LINE L1 271 1312 -4734 14140 169 45 62 chr5 9880965 9881038 -189749112 + L1M1 LINE L1 700 773 -6792 5490 109 5 6 chr5 9881038 9881819 -189748331 - LTR17 LTR ERV1 0 780 1 14140 169 45 62 chr5 9881819 9886648 -189743502 + L1M1 LINE L1 773 5536 -2029 330 265 155 22 chr5 9887126 9887307 -189742843 + L1MC4a LINE L1 7510 7887 -108 22 0 0 0 chr5 9887413 9887435 -189742715 + AT_rich Low_complexity Low_complexity 1 22 0 210 143 0 0 chr5 9888771 9888806 -189741344 + (TTCCC)n Simple_repeat Simple_repeat 1 35 0 323 292 19 43 chr5 9889365 9889574 -189740576 + MLT1J1 LTR MaLR 234 437 -9 491 294 11 39 chr5 9890397 9890577 -189739573 - L2 LINE L2 -628 2686 2512 991 288 92 22 chr5 9890817 9891320 -189738830 + L2 LINE L2 2394 2931 -383 337 302 90 54 chr5 9891340 9891562 -189738588 + L2 LINE L2 3075 3304 -9 209 182 0 65 chr5 9891859 9891936 -189738214 + T-rich Low_complexity Low_complexity 3 74 0 387 41 0 0 chr5 9892455 9892504 -189737646 + (CA)n Simple_repeat Simple_repeat 2 50 0 242 253 13 13 chr5 9894327 9894402 -189735748 + MLT1L LTR MaLR 1 75 -540 369 255 54 88 chr5 9894544 9894783 -189735367 + MLT1J LTR MaLR 228 458 -53 317 289 33 25 chr5 9897067 9897188 -189732962 + L1MCb LINE L1 449 570 -5475 406 248 32 16 chr5 9897275 9897400 -189732750 + L1MCb LINE L1 570 696 -5349 1582 255 47 55 chr5 9897402 9898297 -189731853 + L1M4 LINE L1 2645 3532 -2614 1162 231 3 60 chr5 9898314 9898613 -189731537 - AluJb SINE Alu -30 282 1 637 186 87 50 chr5 9898738 9898899 -189731251 - MER5A DNA MER1_type -5 184 18 312 193 84 0 chr5 9899216 9899299 -189730851 + MLT1J LTR MaLR 526 615 -9 210 288 0 0 chr5 9900130 9900189 -189729961 + GA-rich Low_complexity Low_complexity 1 59 0 183 360 44 9 chr5 9905181 9905295 -189724855 - L2 LINE L2 -640 2674 2557 21 36 0 0 chr5 9906564 9906592 -189723558 + AT_rich Low_complexity Low_complexity 1 28 0 2486 51 0 3 chr5 9907157 9907450 -189722700 + AluY SINE Alu 1 292 -19 2331 159 4 50 chr5 9907856 9908320 -189721830 - MER65A LTR ERV1 0 445 3 1100 267 51 41 chr5 9910703 9911115 -189719035 + LTR40a LTR ERVL 104 519 0 878 238 0 15 chr5 9911790 9911992 -189718158 + L1PA16 LINE L1 2 200 -6587 369 309 47 73 chr5 9911994 9912295 -189717855 + L1PA16 LINE L1 434 726 -6061 4838 248 20 25 chr5 9912477 9915322 -189714828 + L1PA16 LINE L1 1323 4136 -2661 1530 177 57 38 chr5 9915339 9915707 -189714443 - THE1C LTR MaLR 0 375 1 5971 162 14 54 chr5 9915707 9916982 -189713168 - THE1C-int LTR MaLR 0 1580 357 4794 167 11 9 chr5 9917093 9918454 -189711696 + L1PA16 LINE L1 5435 6811 -6 253 288 0 0 chr5 9919169 9919249 -189710901 - MER65A-int LTR ERV1 -134 6667 6588 1699 216 17 11 chr5 9919936 9920292 -189709858 + MLT1A1 LTR MaLR 4 361 -4 835 328 30 7 chr5 9920297 9920730 -189709420 + L1MEc LINE L1 292 734 -5873 300 269 35 28 chr5 9923042 9923187 -189706963 + LTR16C LTR ERVL 344 489 -2 346 270 135 24 chr5 9923307 9923433 -189706717 - MER91C DNA MER1_type 0 140 1 200 299 75 0 chr5 9924469 9924536 -189705614 - MIR SINE MIR -81 181 110 25 31 0 0 chr5 9925210 9925242 -189704908 + AT_rich Low_complexity Low_complexity 1 32 0 257 208 14 0 chr5 9925586 9925658 -189704492 + (TA)n Simple_repeat Simple_repeat 2 74 0 359 243 29 71 chr5 9926755 9926965 -189703185 + L1MA10 LINE L1 6134 6334 0 506 218 34 58 chr5 9927713 9927919 -189702231 + L1MA10 LINE L1 6134 6334 0 2031 163 0 0 chr5 9928295 9928589 -189701561 + AluSx SINE Alu 1 294 -18 2065 144 0 22 chr5 9928641 9928960 -189701190 + AluSx SINE Alu 1 312 0 1281 147 77 18 chr5 9929170 9929442 -189700708 - MER46B DNA MER2_type -73 163 1 218 222 34 34 chr5 9931093 9931210 -189698940 + (TA)n Simple_repeat Simple_repeat 2 118 0 21 0 0 0 chr5 9931494 9931515 -189698635 + AT_rich Low_complexity Low_complexity 1 21 0 443 127 0 0 chr5 9931601 9931672 -189698478 + MADE1 DNA Mariner 1 71 -9 1870 100 82 0 chr5 9931861 9932141 -189698009 + AluSp SINE Alu 1 303 -10 2277 47 22 0 chr5 9932464 9932815 -189697335 + AluY SINE Alu 5 311 0 999 260 32 63 chr5 9934902 9935455 -189694695 + Charlie2a DNA MER1_type 1546 2081 -781 27 29 0 0 chr5 9935468 9935502 -189694648 + AT_rich Low_complexity Low_complexity 1 34 0 227 191 16 16 chr5 9935540 9935603 -189694547 + Charlie2a DNA MER1_type 2109 2171 -691 836 261 89 65 chr5 9935671 9936463 -189693687 + L1MEc LINE L1 1275 2046 -4380 2329 94 3 0 chr5 9936463 9936761 -189693389 - AluSp SINE Alu -13 300 2 836 261 89 65 chr5 9936761 9937390 -189692760 + L1MEc LINE L1 2046 2868 -3558 242 122 0 20 chr5 9937392 9937441 -189692709 + (GGA)n Simple_repeat Simple_repeat 3 50 0 1093 256 0 9 chr5 9937441 9937762 -189692388 + L1MEc LINE L1 2878 3195 -3231 955 142 17 94 chr5 9937820 9938090 -189692060 + L1M1 LINE L1 5223 5474 -743 21 36 0 0 chr5 9938458 9938486 -189691664 + AT_rich Low_complexity Low_complexity 1 28 0 1558 152 194 8 chr5 9939024 9939380 -189690770 + MSTA LTR MaLR 7 428 0 1863 162 72 17 chr5 9939594 9939939 -189690211 - THE1B LTR MaLR 0 364 1 23 92 0 0 chr5 9940699 9940764 -189689386 + AT_rich Low_complexity Low_complexity 1 65 0 7716 17 3 0 chr5 9940993 9942350 -189687800 + L1PA3 LINE L1 4827 6187 0 22 0 0 0 chr5 9943313 9943335 -189686815 + AT_rich Low_complexity Low_complexity 1 22 0 407 136 0 0 chr5 9943402 9943468 -189686682 - Alu SINE Alu -12 300 235 234 0 0 0 chr5 9944229 9944255 -189685895 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 1490 196 54 4 chr5 9944261 9944658 -189685492 + L1ME LINE L1 5176 5589 -744 939 234 20 16 chr5 9944670 9944914 -189685236 - L1PB4 LINE L1 -14 6142 5898 233 294 0 78 chr5 9945779 9945881 -189684269 + L2 LINE L2 3196 3289 -24 392 304 155 19 chr5 9945904 9946111 -189684039 + MIR SINE MIR 28 262 0 350 306 22 55 chr5 9948273 9948456 -189681694 - MER5B DNA MER1_type 0 178 2 281 231 128 26 chr5 9948924 9949041 -189681109 + LTR16A LTR ERVL 320 448 -2 2096 137 23 0 chr5 9950566 9950908 -189679242 - L1PA14 LINE L1 0 6161 5812 274 256 0 0 chr5 9951569 9951651 -189678499 + L1ME LINE L1 5674 5755 -415 27 29 0 0 chr5 9952013 9952047 -189678103 + AT_rich Low_complexity Low_complexity 1 34 0 2531 107 28 0 chr5 9953074 9953428 -189676722 + THE1B LTR MaLR 1 364 0 552 173 29 7 chr5 9955944 9956083 -189674067 + GA-rich Low_complexity Low_complexity 3 144 0 4734 234 29 8 chr5 9956443 9957821 -189672329 + L1M4 LINE L1 3631 5037 -1109 1930 167 3 3 chr5 9957995 9958300 -189671850 - AluSx SINE Alu -7 305 1 446 215 37 0 chr5 9960168 9960275 -189669875 + L1MA4 LINE L1 5970 6080 -220 281 26 26 0 chr5 9961015 9961053 -189669097 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 2589 133 30 0 chr5 9962052 9962451 -189667699 - LTR57 LTR ERVL 0 411 1 2044 121 0 39 chr5 9963076 9963382 -189666768 - AluY SINE Alu -15 296 3 332 227 114 23 chr5 9964149 9964281 -189665869 + L2 LINE L2 3112 3255 -58 324 343 112 12 chr5 9964328 9964570 -189665580 + L2 LINE L2 1990 2255 -1059 2295 87 0 10 chr5 9965044 9965355 -189664795 - AluY SINE Alu -3 308 1 488 302 19 6 chr5 9966503 9966662 -189663488 + MIR SINE MIR 60 220 -42 460 215 56 0 chr5 9967035 9967142 -189663008 - MER68 LTR ERV1 0 562 450 6196 205 28 5 chr5 9967143 9968643 -189661507 - L1 LINE L1 -1135 5011 3478 27 29 0 0 chr5 9969391 9969425 -189660725 + AT_rich Low_complexity Low_complexity 1 34 0 198 326 33 33 chr5 9971919 9972011 -189658139 - L2 LINE L2 -19 3253 3162 287 284 53 110 chr5 9972371 9972653 -189657497 + L2 LINE L2 2988 3253 -19 889 177 7 131 chr5 9974272 9974555 -189655595 - MLT1A1 LTR MaLR -2 363 116 12122 28 4 0 chr5 9974679 9976872 -189653278 - L1PA3 LINE L1 -70 6085 3883 22 56 0 0 chr5 9977222 9977258 -189652892 + AT_rich Low_complexity Low_complexity 1 36 0 2408 63 3 0 chr5 9977757 9978057 -189652093 - AluY SINE Alu -10 301 1 380 213 8 0 chr5 9978659 9978781 -189651369 + (TA)n Simple_repeat Simple_repeat 1 123 0 2261 76 3 0 chr5 9980225 9980526 -189649624 - AluY SINE Alu -9 302 1 226 279 36 0 chr5 9980761 9980872 -189649278 - L1ME LINE L1 -330 5791 5677 237 281 21 42 chr5 9981122 9981218 -189648932 + L1MDb LINE L1 332 425 -6004 438 144 89 0 chr5 9981399 9981489 -189648661 + MER4A LTR ERV1 1 98 -566 1556 139 25 68 chr5 9981490 9981850 -189648300 + MER4A LTR ERV1 262 664 0 269 136 0 0 chr5 9981934 9981978 -189648172 - L1MB1 LINE L1 0 6168 6125 1905 229 69 9 chr5 9982201 9982734 -189647416 - MER34B LTR ERV1 0 565 1 1241 173 121 72 chr5 9982893 9983322 -189646828 + LTR7 LTR ERV1 1 450 0 3281 217 62 72 chr5 9983322 9985379 -189644771 + HERVH LTR ERV1 1 2047 -5666 363 191 0 0 chr5 9985379 9985442 -189644708 + MER4A LTR ERV1 378 440 -224 506 310 77 75 chr5 9986004 9986443 -189643707 + L1MD3 LINE L1 2 441 -5604 738 257 58 56 chr5 9987042 9987455 -189642695 + L1MD3 LINE L1 745 1158 -4888 * 1274 80 0 45 chr5 9987445 9987592 -189642558 + L1P5 LINE L1 5592 5729 -422 1908 134 7 20 chr5 9987592 9987890 -189642260 + AluSq SINE Alu 1 294 -19 1274 80 0 45 chr5 9987890 9987941 -189642209 + L1P5 LINE L1 5729 5781 -370 336 48 0 0 chr5 9987944 9987986 -189642164 + (TG)n Simple_repeat Simple_repeat 2 43 0 401 231 56 42 chr5 9988041 9988184 -189641966 + L1MD3 LINE L1 1969 2113 -4451 1289 293 57 18 chr5 9988246 9989138 -189641012 + L1MD3 LINE L1 3609 4535 -2029 679 255 64 85 chr5 9989145 9989521 -189640629 + MSTD LTR MaLR 6 373 -23 2779 256 99 37 chr5 9989540 9989719 -189640431 + L1MD3 LINE L1 4613 4779 -1785 2062 144 3 3 chr5 9989719 9990025 -189640125 + AluSc SINE Alu 1 306 -3 2779 256 99 37 chr5 9990025 9992143 -189638007 + L1MD3 LINE L1 4779 5469 -1095 297 0 0 0 chr5 9992143 9992176 -189637974 + (CA)n Simple_repeat Simple_repeat 2 34 0 2779 256 99 37 chr5 9992176 9992547 -189637603 + L1MD3 LINE L1 5469 5815 -749 1594 223 43 28 chr5 9992877 9993273 -189636877 - L1MD1 LINE L1 -6 6236 5847 2483 60 0 0 chr5 9993273 9993574 -189636576 - AluY SINE Alu -10 301 1 1594 223 43 28 chr5 9993574 9994281 -189635869 - L1MD1 LINE L1 -395 5847 4968 4548 227 62 49 chr5 9994335 9996048 -189634102 + L1MDb LINE L1 8 1734 -4672 1738 162 68 31 chr5 9996088 9996287 -189633863 - THE1B LTR MaLR 0 364 145 2183 131 0 0 chr5 9996287 9996585 -189633565 - AluSq SINE Alu -15 298 1 1738 162 68 31 chr5 9996585 9996736 -189633414 - THE1B LTR MaLR -219 145 1 532 224 0 9 chr5 9996736 9996852 -189633298 - L1MDb LINE L1 -6252 157 43 452 283 34 34 chr5 9997146 9997379 -189632771 + L1ME1 LINE L1 5928 6160 -6 2183 111 7 3 chr5 9997481 9997778 -189632372 - AluSp SINE Alu -4 309 12 792 203 154 24 chr5 9997847 9998092 -189632058 - MLT1B LTR MaLR 0 390 114 338 183 0 0 chr5 9998092 9998152 -189631998 - MER52A LTR ERV1 0 1755 1696 3393 227 48 43 chr5 9998159 9999292 -189630858 - MER52A LTR ERV1 -562 1193 56 678 158 201 11 chr5 10000371 10000555 -189629595 - MER90 LTR ERV1 -14 600 382 744 241 43 35 chr5 10000569 10000826 -189629324 - MER90 LTR ERV1 -310 265 7 2099 121 0 0 chr5 10000916 10001227 -189628923 - AluSc SINE Alu 0 311 1 2848 7 0 0 chr5 10001345 10001652 -189628498 + AluYa5 SINE Alu 1 307 -4 22 0 0 0 chr5 10002979 10003001 -189627149 + AT_rich Low_complexity Low_complexity 1 22 0 2018 114 0 0 chr5 10003098 10003369 -189626781 - AluSc SINE Alu -4 305 35 22 0 0 0 chr5 10003886 10003908 -189626242 + AT_rich Low_complexity Low_complexity 1 22 0 2870 94 18 16 chr5 10003976 10004365 -189625785 + L1PB2 LINE L1 5711 6103 -48 2326 124 34 8 chr5 10004365 10004720 -189625430 - THE1B LTR MaLR 0 364 1 2870 94 18 16 chr5 10004720 10004768 -189625382 + L1PB2 LINE L1 6103 6149 -2 349 210 40 30 chr5 10005224 10005324 -189624826 + MER94 DNA DNA 1 101 -33 609 336 119 30 chr5 10007207 10007698 -189622452 - L2 LINE L2 -19 3294 2747 1523 154 67 83 chr5 10007698 10008133 -189622017 - MSTB1 LTR MaLR -4 428 1 609 336 119 30 chr5 10008133 10008163 -189621987 - L2 LINE L2 -566 2747 2721 513 167 0 0 chr5 10010083 10010185 -189619965 + (TGGA)n Simple_repeat Simple_repeat 1 102 0 272 357 43 47 chr5 10010670 10010947 -189619203 - L2 LINE L2 -1297 2017 1742 1069 140 57 83 chr5 10011956 10012220 -189617930 - THE1C LTR MaLR -118 257 1 7517 153 16 8 chr5 10012424 10013745 -189616405 + Tigger4(Zombi) DNA MER2_type 103 1434 -1297 1247 137 155 161 chr5 10013745 10014287 -189615863 - MER4A LTR ERV1 0 664 126 311 111 0 19 chr5 10014297 10014351 -189615799 + (TTTC)n Simple_repeat Simple_repeat 1 53 0 783 97 8 8 chr5 10014351 10014475 -189615675 - MER4A LTR ERV1 -540 124 1 7365 135 20 9 chr5 10014487 10015762 -189614388 + Tigger4(Zombi) DNA MER2_type 1443 2730 -1 727 204 151 70 chr5 10015855 10016212 -189613938 - MLT1B LTR MaLR -4 386 1 656 238 0 0 chr5 10016317 10016439 -189613711 - FLAM_C SINE Alu -19 124 3 1926 178 21 40 chr5 10016833 10017255 -189612895 - MLT2D LTR ERVL 0 414 1 808 224 24 0 chr5 10018066 10018231 -189611919 - FRAM SINE Alu -10 166 1 2493 60 0 0 chr5 10018286 10018584 -189611566 - AluY SINE Alu -13 298 1 1113 292 84 11 chr5 10018693 10019159 -189610991 + ERVL LTR ERVL 1803 2302 -3462 1559 282 71 33 chr5 10019226 10020531 -189609619 + ERVL LTR ERVL 2416 3848 -1916 212 195 39 104 chr5 10021136 10021213 -189608937 - MIR3 SINE MIR -36 172 101 309 261 268 0 chr5 10021297 10021439 -189608711 - MIR SINE MIR -11 251 72 5564 156 26 3 chr5 10022577 10022635 -189607515 + Tigger1 DNA MER2_type 1 56 -2362 195 42 0 0 chr5 10022635 10022659 -189607491 + (TA)n Simple_repeat Simple_repeat 1 24 0 5564 156 26 3 chr5 10022659 10023602 -189606548 + Tigger1 DNA MER2_type 56 1025 -1393 509 146 0 0 chr5 10023600 10023682 -189606468 + Tigger1 DNA MER2_type 2337 2418 0 * 2299 117 3 0 chr5 10023754 10024063 -189606087 - AluSg SINE Alu 0 310 1 1881 129 161 13 chr5 10024382 10024755 -189605395 + MSTA LTR MaLR 1 428 0 199 229 169 36 chr5 10025609 10025692 -189604458 + L2 LINE L2 3187 3280 -33 * 349 297 99 56 chr5 10025687 10025919 -189604231 - MIR SINE MIR -2 260 19 319 326 58 7 chr5 10027773 10027911 -189602239 - MIR SINE MIR -110 152 8 24 32 0 0 chr5 10028177 10028208 -189601942 + AT_rich Low_complexity Low_complexity 1 31 0 334 346 100 4 chr5 10028364 10028604 -189601546 - L2 LINE L2 -431 2883 2621 22 70 0 0 chr5 10029270 10029313 -189600837 + AT_rich Low_complexity Low_complexity 1 43 0 354 284 93 19 chr5 10030734 10030896 -189599254 + MLT1I LTR MaLR 226 399 -10 449 211 159 9 chr5 10031788 10032020 -189598130 + MER97a DNA MER1_type? 586 852 -42 747 248 96 11 chr5 10032042 10032324 -189597826 - L2 LINE L2 -1197 2117 1812 1813 148 34 14 chr5 10032364 10032661 -189597489 + AluJb SINE Alu 1 303 -9 22 0 0 0 chr5 10032775 10032797 -189597353 + AT_rich Low_complexity Low_complexity 1 22 0 622 258 148 9 chr5 10033030 10033259 -189596891 + MIR SINE MIR 2 262 0 2366 66 0 3 chr5 10033284 10033572 -189596578 - AluY SINE Alu -24 287 1 1261 277 124 15 chr5 10034529 10035070 -189595080 + MER90 LTR ERV1 11 573 -2 489 142 242 8 chr5 10035138 10035258 -189594892 - MER4C LTR ERV1 -18 447 300 1104 148 136 47 chr5 10035390 10035707 -189594443 - MER4A LTR ERV1 -319 345 1 521 306 0 8 chr5 10035711 10035845 -189594305 - MIR SINE MIR -110 152 20 531 283 98 4 chr5 10036199 10036443 -189593707 - L1MC4 LINE L1 -144 7898 7632 515 267 0 0 chr5 10036517 10036652 -189593498 - L1MC4a LINE L1 -514 7294 7160 1336 219 52 11 chr5 10036655 10037021 -189593129 - L1MC4 LINE L1 -963 7079 6699 353 311 96 33 chr5 10037334 10037762 -189592388 - L1ME3A LINE L1 -312 5858 5404 431 304 43 58 chr5 10037815 10038469 -189591681 - L1ME3A LINE L1 -1441 4705 4062 2386 127 19 3 chr5 10038490 10038859 -189591291 - THE1C LTR MaLR 0 375 1 9261 127 40 41 chr5 10038859 10040441 -189589709 - THE1C-int LTR MaLR 0 1580 1 2038 155 11 6 chr5 10040441 10040796 -189589354 - THE1C LTR MaLR 0 375 19 239 321 36 0 chr5 10040923 10041060 -189589090 - L1ME3A LINE L1 -2502 3644 3503 1422 210 0 11 chr5 10041074 10041350 -189588800 + MER68 LTR ERV1 290 562 0 645 296 68 27 chr5 10041354 10041722 -189588428 - L1ME3A LINE L1 -2730 3416 3034 403 272 5 60 chr5 10041880 10042064 -189588086 - MER52A LTR ERV1 0 1755 1582 * 924 234 17 78 chr5 10042044 10042748 -189587402 - MER52A LTR ERV1 -147 895 283 9370 122 18 7 chr5 10042753 10044218 -189585932 - MER52-int LTR ERV1 0 7091 5611 202 305 0 37 chr5 10044570 10044652 -189585498 - MIR SINE MIR -31 231 153 207 161 0 0 chr5 10045343 10045374 -189584776 + (CAT)n Simple_repeat Simple_repeat 3 33 0 387 363 29 29 chr5 10045447 10045618 -189584532 + MIR3 SINE MIR 16 186 -22 2174 112 23 3 chr5 10046219 10046552 -189583598 + AluSg SINE Alu 1 339 0 21 0 0 0 chr5 10046736 10046757 -189583393 + AT_rich Low_complexity Low_complexity 1 21 0 1313 224 46 53 chr5 10047063 10047113 -189583037 + MER57B LTR ERV1 1 50 -384 2332 129 8 21 chr5 10047113 10047493 -189582657 - THE1C LTR MaLR 0 375 1 1313 224 46 53 chr5 10047493 10047874 -189582276 + MER57B LTR ERV1 50 429 -5 369 277 44 38 chr5 10047896 10048055 -189582095 + MER57B-int LTR ERV1 3 162 -7375 2544 69 0 0 chr5 10048233 10048537 -189581613 - AluY SINE Alu -7 304 1 23 0 0 0 chr5 10048651 10048674 -189581476 + AT_rich Low_complexity Low_complexity 1 23 0 2023 142 7 0 chr5 10048674 10048969 -189581181 - AluSx SINE Alu -15 297 1 207 0 0 0 chr5 10049703 10049726 -189580424 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 265 315 0 27 chr5 10050951 10051062 -189579088 + MER57-int LTR ERV1 3304 3411 -4345 254 359 0 0 chr5 10052373 10052451 -189577699 + MER57-int LTR ERV1 3784 3861 -2940 1410 255 17 43 chr5 10052529 10053012 -189577138 + MER57-int LTR ERV1 5277 5746 -1791 663 358 17 33 chr5 10052983 10053675 -189576475 + MER57-int LTR ERV1 2093 2773 -1874 * 1681 144 157 82 chr5 10053678 10054054 -189576096 - MER4A LTR ERV1 0 664 261 585 143 10 10 chr5 10054054 10054152 -189575998 - MER4A LTR ERV1 -566 98 1 762 220 7 0 chr5 10054166 10054307 -189575843 + MER57-int LTR ERV1 5953 6094 -1443 233 181 0 69 chr5 10054332 10054404 -189575746 - LTR64 LTR ERVK -2 556 490 6479 157 15 7 chr5 10054902 10055982 -189574168 + Tigger2 DNA MER2_type 1630 2717 -1 22 0 0 0 chr5 10057081 10057103 -189573047 + AT_rich Low_complexity Low_complexity 1 22 0 2146 136 95 3 chr5 10057181 10057662 -189572488 - LTR49 LTR ERV1 0 595 1 3696 174 13 14 chr5 10057763 10058469 -189571681 + MER67C LTR ERV1 2 706 -4 2825 200 20 75 chr5 10058592 10059323 -189570827 - LTR8 LTR ERV1 0 691 1 1753 168 10 30 chr5 10059515 10059819 -189570331 - AluJb SINE Alu -12 300 3 279 309 109 48 chr5 10060314 10060479 -189569671 - MIR SINE MIR -81 181 7 4823 172 27 5 chr5 10061075 10061958 -189568192 - MER4D LTR ERV1 0 903 1 23 0 0 0 chr5 10063771 10063794 -189566356 + AT_rich Low_complexity Low_complexity 1 23 0 196 220 20 0 chr5 10064246 10064296 -189565854 + MER5B DNA MER1_type 1 51 -127 3245 245 94 42 chr5 10064824 10065265 -189564885 + L1M3e LINE L1 1383 1799 -5307 1591 176 70 25 chr5 10065265 10065624 -189564526 - THE1C LTR MaLR 0 375 1 3245 245 94 42 chr5 10065624 10065765 -189564385 + L1M3e LINE L1 1799 1931 -5175 408 20 0 0 chr5 10065765 10065814 -189564336 + (CA)n Simple_repeat Simple_repeat 2 50 0 3245 245 94 42 chr5 10065814 10068315 -189561835 + L1M3e LINE L1 1931 4290 -2816 263 259 0 0 chr5 10068316 10068370 -189561780 + Tigger7 DNA MER2_type 2 55 -2432 * 764 161 0 36 chr5 10068365 10068533 -189561617 + Tigger7 DNA MER2_type 2234 2395 -96 2180 104 0 0 chr5 10068604 10068919 -189561231 + AluY SINE Alu 1 315 0 2046 180 26 0 chr5 10068978 10069356 -189560794 + MLT1B LTR MaLR 3 390 0 375 288 101 14 chr5 10070710 10070849 -189559301 - MIR SINE MIR -17 245 95 192 318 45 27 chr5 10071010 10071120 -189559030 + L2 LINE L2 3161 3272 0 2057 158 97 8 chr5 10072168 10072561 -189557589 - MSTA LTR MaLR 0 428 1 724 260 29 0 chr5 10073315 10073488 -189556662 + MER45A DNA AcHobo 1 178 0 2295 137 11 8 chr5 10075048 10075406 -189554744 + THE1B LTR MaLR 1 359 -5 2251 85 0 53 chr5 10075406 10075724 -189554426 + AluSp SINE Alu 1 301 -12 207 0 0 0 chr5 10076652 10076675 -189553475 + (T)n Simple_repeat Simple_repeat 1 23 0 335 255 32 21 chr5 10076737 10076831 -189553319 - MLT1L LTR MaLR -210 405 311 587 353 39 24 chr5 10077003 10077337 -189552813 - MLT1J LTR MaLR -156 355 17 819 231 29 0 chr5 10077520 10077693 -189552457 + MER45A DNA AcHobo 1 178 0 315 346 12 0 chr5 10078174 10078336 -189551814 + A-rich Low_complexity Low_complexity 3 166 0 22 70 0 0 chr5 10078629 10078672 -189551478 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr5 10078852 10078877 -189551273 + AT_rich Low_complexity Low_complexity 1 25 0 9571 121 2 1 chr5 10078884 10081143 -189549007 - L1PA8 LINE L1 -3 6169 3908 2060 146 132 5 chr5 10081433 10081811 -189548339 - MSTA LTR MaLR 0 428 3 180 0 0 0 chr5 10082222 10082242 -189547908 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 3486 80 4 6 chr5 10082242 10082718 -189547432 - L1PA8 LINE L1 -23 6149 5675 213 290 0 10 chr5 10083213 10083313 -189546837 + (TTG)n Simple_repeat Simple_repeat 2 100 0 246 136 0 0 chr5 10083321 10083365 -189546785 + (TGG)n Simple_repeat Simple_repeat 1 44 0 266 329 129 34 chr5 10083669 10083981 -189546169 + L2 LINE L2 2729 3070 -243 1246 226 104 44 chr5 10084573 10085100 -189545050 - L1MC4 LINE L1 -1 8041 7483 285 257 14 0 chr5 10085091 10085165 -189544985 - L1MC4a LINE L1 -1383 6425 6351 * 1228 278 33 14 chr5 10085167 10085588 -189544562 - L1ME2 LINE L1 -9 6155 5727 459 228 63 16 chr5 10085588 10085715 -189544435 - MLT2F LTR ERVL 0 663 531 3739 164 50 10 chr5 10085715 10086396 -189543754 - L1P3 LINE L1 -5733 728 21 1375 136 80 31 chr5 10086419 10086705 -189543445 - THE1C LTR MaLR -75 300 1 34 84 0 0 chr5 10086982 10087065 -189543085 + AT_rich Low_complexity Low_complexity 1 83 0 315 0 0 0 chr5 10087099 10087134 -189543016 + (TG)n Simple_repeat Simple_repeat 2 36 0 1292 128 0 0 chr5 10087306 10087493 -189542657 - AluSg/x SINE Alu 0 312 126 22 35 0 0 chr5 10088136 10088165 -189541985 + AT_rich Low_complexity Low_complexity 1 29 0 2650 35 0 10 chr5 10088227 10088541 -189541609 - AluY SINE Alu 0 311 1 24 32 0 0 chr5 10088720 10088751 -189541399 + AT_rich Low_complexity Low_complexity 1 31 0 367 215 99 25 chr5 10088877 10088998 -189541152 + MER5A DNA MER1_type 59 188 -1 23 0 0 0 chr5 10089449 10089472 -189540678 + AT_rich Low_complexity Low_complexity 1 23 0 267 214 0 18 chr5 10089559 10089615 -189540535 + Tigger7 DNA MER2_type 1 55 -284 * 1273 113 9 5 chr5 10089613 10089825 -189540325 + Tigger7 DNA MER2_type 2335 2547 -40 207 88 0 0 chr5 10090043 10090077 -189540073 + (A)n Simple_repeat Simple_repeat 1 34 0 708 218 81 0 chr5 10090652 10090826 -189539324 + MER5A DNA MER1_type 1 188 -1 399 223 8 40 chr5 10091466 10091598 -189538552 - L1MB7 LINE L1 -1 6173 6058 2372 180 40 67 chr5 10093656 10094499 -189535651 + MER21A LTR ERV1 1 930 -1 535 236 43 7 chr5 10097562 10097702 -189532448 - LTR52 LTR ERVL 0 421 277 55 86 0 0 chr5 10098816 10098955 -189531195 + AT_rich Low_complexity Low_complexity 1 139 0 1317 283 110 41 chr5 10098996 10099780 -189530370 - HAL1 LINE L1 -100 2407 1570 1350 194 90 4 chr5 10099780 10100058 -189530092 - AluJo SINE Alu -10 302 1 566 282 30 30 chr5 10100061 10100295 -189529855 - HAL1 LINE L1 -1026 1481 1248 308 306 145 30 chr5 10100373 10100828 -189529322 - L1ME LINE L1 -333 5829 5321 308 284 140 34 chr5 10101243 10101507 -189528643 - L1ME4a LINE L1 -71 6050 5759 276 295 33 16 chr5 10102071 10102193 -189527957 + MER104 DNA Tc2 1 124 -56 331 309 102 12 chr5 10102256 10102458 -189527692 + MLT1E LTR MaLR 1 220 -362 829 292 49 49 chr5 10102560 10102967 -189527183 + L1ME3A LINE L1 5723 6129 -41 3070 59 0 0 chr5 10103045 10103435 -189526715 - L1PA8 LINE L1 0 6172 5783 277 325 25 0 chr5 10103587 10103667 -189526483 - MIR SINE MIR -155 107 26 684 195 38 0 chr5 10104981 10105140 -189525010 - L1MB7 LINE L1 -9 6175 6011 762 257 30 10 chr5 10105365 10105669 -189524481 + L1ME2 LINE L1 2185 2494 -3652 605 147 16 24 chr5 10105690 10105932 -189524218 + L1MA7 LINE L1 5946 6291 0 2826 251 45 55 chr5 10105933 10107494 -189522656 + L1ME2 LINE L1 2490 4035 -2111 365 183 14 0 chr5 10107500 10107571 -189522579 + L1MC3 LINE L1 6878 6949 -836 1364 248 49 31 chr5 10107610 10108162 -189521988 + L1ME2 LINE L1 5584 6145 -19 189 0 0 0 chr5 10109600 10109621 -189520529 + (A)n Simple_repeat Simple_repeat 1 21 0 395 125 0 0 chr5 10109626 10109682 -189520468 - MLT1B LTR MaLR 0 390 335 * 990 237 5 0 chr5 10109681 10109900 -189520250 - MLT1B LTR MaLR -170 220 1 976 88 0 0 chr5 10109951 10110076 -189520074 + AluSg/x SINE Alu 174 298 -14 2116 118 0 7 chr5 10110163 10110459 -189519691 - AluSg SINE Alu -16 294 1 629 275 77 77 chr5 10110544 10111035 -189519115 + LTR33A LTR ERVL 31 521 -2 180 293 36 48 chr5 10111646 10111813 -189518337 - L2 LINE L2 -273 2999 2835 3383 139 46 56 chr5 10112101 10112726 -189517424 - LTR31 LTR ERV1 0 619 1 3660 200 35 4 chr5 10113120 10114041 -189516109 + MER45R DNA AcHobo 535 1483 -98 1013 189 0 0 chr5 10114107 10114276 -189515874 + AluSg/x SINE Alu 125 293 -19 1039 198 38 0 chr5 10114384 10114622 -189515528 - L1MA9 LINE L1 -36 6276 6030 * 2699 183 26 9 chr5 10114612 10115114 -189515036 + L1MA9 LINE L1 5424 5939 -373 273 57 0 0 chr5 10115114 10115149 -189515001 + (TAA)n Simple_repeat Simple_repeat 2 36 0 2699 183 26 9 chr5 10115149 10115230 -189514920 + L1MA9 LINE L1 5939 6017 -295 2397 149 3 3 chr5 10115676 10116051 -189514099 + THE1C LTR MaLR 1 375 0 387 0 0 0 chr5 10117213 10117256 -189512894 + (TG)n Simple_repeat Simple_repeat 2 44 0 290 89 0 54 chr5 10117609 10117665 -189512485 + (TTTTC)n Simple_repeat Simple_repeat 1 53 0 198 103 0 0 chr5 10117663 10117692 -189512458 + (TCCC)n Simple_repeat Simple_repeat 4 32 0 * 375 23 0 0 chr5 10117874 10117918 -189512232 + (TG)n Simple_repeat Simple_repeat 1 44 0 581 249 94 133 chr5 10118760 10119218 -189510932 - MLT1E LTR MaLR -105 549 110 413 252 119 13 chr5 10119235 10119386 -189510764 - MLT1E LTR MaLR -426 167 1 27 0 0 0 chr5 10119751 10119778 -189510372 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 10121532 10121560 -189508590 + AT_rich Low_complexity Low_complexity 1 28 0 2107 136 3 0 chr5 10121721 10122031 -189508119 + AluSx SINE Alu 1 311 -1 204 295 33 0 chr5 10122286 10122347 -189507803 + MIR SINE MIR 92 154 -108 34 55 0 0 chr5 10122350 10122405 -189507745 + AT_rich Low_complexity Low_complexity 1 55 0 7023 211 33 10 chr5 10123234 10124917 -189505233 + L1MC3 LINE L1 5547 7273 -512 2209 119 48 20 chr5 10124917 10125269 -189504881 + THE1B LTR MaLR 1 362 -2 7023 211 33 10 chr5 10125269 10125323 -189504827 + L1MC3 LINE L1 7273 7324 -461 1200 198 31 0 chr5 10125344 10125634 -189504516 + L1MC3 LINE L1 6150 6339 -5 21 36 0 0 chr5 10125657 10125685 -189504465 + AT_rich Low_complexity Low_complexity 1 28 0 1517 246 54 67 chr5 10125704 10126032 -189504118 - L1M4 LINE L1 -1824 4322 3991 180 0 0 0 chr5 10126032 10126052 -189504098 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1517 246 54 67 chr5 10126052 10126488 -189503662 - L1M4 LINE L1 -2155 3991 3568 606 262 143 6 chr5 10127055 10127391 -189502759 - MER114 LTR ERV 0 648 267 537 187 16 82 chr5 10127425 10127607 -189502543 - MER114 LTR ERV -478 170 1 2173 123 7 3 chr5 10128237 10128546 -189501604 + AluSx SINE Alu 1 310 -2 301 321 92 16 chr5 10128844 10129028 -189501122 + L2 LINE L2 2513 2710 -604 229 339 0 0 chr5 10129820 10129885 -189500265 + MIR SINE MIR 41 105 -103 468 376 105 0 chr5 10130704 10130962 -189499188 + L3 LINE CR1 1280 1564 -13 844 253 65 11 chr5 10131050 10131311 -189498839 - MLT1F LTR MaLR -113 429 155 261 280 40 0 chr5 10131348 10131423 -189498727 - MLT1F LTR MaLR -464 78 1 1573 210 40 101 chr5 10131482 10132035 -189498115 + LTR40a LTR ERVL 1 519 0 2064 117 0 11 chr5 10132253 10132535 -189497615 + AluSg SINE Alu 32 310 0 252 270 8 79 chr5 10133284 10133410 -189496740 - MLT1F-int LTR MaLR -813 558 442 240 295 8 23 chr5 10133585 10133714 -189496436 - MLT1F-int LTR MaLR -1221 150 24 399 305 36 0 chr5 10133746 10133892 -189496258 + MLT1F LTR MaLR 133 280 -262 1056 286 48 45 chr5 10133949 10134488 -189495662 - MLT1F LTR MaLR 0 542 2 334 264 0 0 chr5 10134659 10134750 -189495400 + (TG)n Simple_repeat Simple_repeat 2 92 0 1237 211 8 0 chr5 10134789 10135055 -189495095 - L1MD3 LINE L1 0 7995 7728 344 335 133 47 chr5 10135735 10136308 -189493842 + L2 LINE L2 1548 2169 -1145 494 85 73 6 chr5 10136790 10136955 -189493195 + (TA)n Simple_repeat Simple_repeat 1 176 0 * 559 26 37 90 chr5 10136931 10137120 -189493030 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 643 91 50 14 chr5 10137145 10137364 -189492786 + (TA)n Simple_repeat Simple_repeat 1 227 0 329 261 11 22 chr5 10137368 10137460 -189492690 - L1MC4 LINE L1 -1339 6703 6613 194 258 237 10 chr5 10138500 10138597 -189491553 + L2 LINE L2 3152 3270 -2 1948 139 27 17 chr5 10138981 10139275 -189490875 + AluSx SINE Alu 1 297 -15 22 35 0 0 chr5 10139332 10139361 -189490789 + AT_rich Low_complexity Low_complexity 1 29 0 198 103 0 0 chr5 10141203 10141232 -189488918 + (TAA)n Simple_repeat Simple_repeat 2 30 0 379 325 41 47 chr5 10142520 10142689 -189487461 - L2 LINE L2 -2 3270 3103 241 269 156 25 chr5 10142736 10142896 -189487254 + MIR SINE MIR 48 228 -34 1675 214 33 28 chr5 10143207 10143437 -189486713 - MSTB1 LTR MaLR 0 432 198 2371 84 3 3 chr5 10143437 10143736 -189486414 - AluSq SINE Alu -14 299 1 1675 214 33 28 chr5 10143736 10143931 -189486219 - MSTB1 LTR MaLR -234 198 5 182 345 53 18 chr5 10145639 10145752 -189484398 + MIR SINE MIR 113 229 -33 1728 209 105 38 chr5 10146662 10147241 -189482909 + L1MB8 LINE L1 5271 5888 -290 1580 150 48 107 chr5 10149136 10149576 -189480574 + MLT2D LTR ERVL 1 414 0 202 344 0 33 chr5 10149973 10150124 -189480026 + C-rich Low_complexity Low_complexity 3 148 0 229 238 62 12 chr5 10151277 10151357 -189478793 - MER63 DNA MER1_type 0 1060 977 265 271 90 66 chr5 10151357 10151479 -189478671 - MER63 DNA MER1_type -310 750 2 278 194 14 0 chr5 10151549 10151621 -189478529 + GA-rich Low_complexity Low_complexity 1 73 0 2029 144 46 25 chr5 10151717 10152084 -189478066 + THE1C LTR MaLR 1 375 0 306 0 0 0 chr5 10153074 10153108 -189477042 + (CA)n Simple_repeat Simple_repeat 2 35 0 228 342 111 8 chr5 10153163 10153280 -189476870 - MIR SINE MIR -62 146 18 218 132 19 0 chr5 10153969 10154022 -189476128 + (CA)n Simple_repeat Simple_repeat 1 54 0 878 215 37 45 chr5 10155075 10155317 -189474833 + MLT1A1 LTR MaLR 1 240 -125 2828 59 6 0 chr5 10155754 10156110 -189474040 - L1PA7 LINE L1 -8 6146 5789 3963 65 23 7 chr5 10156110 10156747 -189473403 + L1PA7 LINE L1 5146 5789 -365 392 263 3 3 chr5 10156841 10156971 -189473179 + MLT1B LTR MaLR 304 390 0 197 86 57 0 chr5 10157192 10157227 -189472923 + (TAGA)n Simple_repeat Simple_repeat 1 37 0 272 212 30 20 chr5 10157262 10157361 -189472789 + (TTATA)n Simple_repeat Simple_repeat 5 104 0 413 338 44 44 chr5 10157783 10157831 -189472319 - L1M4 LINE L1 -2286 3860 3813 1555 180 47 68 chr5 10157831 10157904 -189472246 - LTR52 LTR ERVL -2 419 346 261 0 0 0 chr5 10157904 10157933 -189472217 + (CA)n Simple_repeat Simple_repeat 2 30 0 1555 180 47 68 chr5 10157933 10158287 -189471863 - LTR52 LTR ERVL -75 346 1 413 338 44 44 chr5 10158287 10158555 -189471595 - L1M4 LINE L1 -2332 3814 3544 229 300 0 12 chr5 10158637 10158717 -189471433 + (TA)n Simple_repeat Simple_repeat 2 80 0 312 242 10 99 chr5 10158818 10158918 -189471232 + MIR SINE MIR 59 142 -120 2215 225 87 21 chr5 10158918 10159527 -189470623 - MLT1E1 LTR MaLR -1 653 5 312 242 10 99 chr5 10159527 10159588 -189470562 + MIR SINE MIR 142 207 -55 251 273 107 9 chr5 10160694 10160809 -189469341 - MIR SINE MIR -70 138 31 225 65 0 0 chr5 10161693 10161724 -189468426 + (GA)n Simple_repeat Simple_repeat 2 32 0 224 167 21 0 chr5 10161740 10161788 -189468362 + (TA)n Simple_repeat Simple_repeat 2 50 0 1363 221 41 67 chr5 10161930 10162095 -189468055 + MER67C LTR ERV1 1 169 -345 2205 140 68 33 chr5 10162095 10162523 -189467627 + MER65A LTR ERV1 1 443 -2 1363 221 41 67 chr5 10162523 10162911 -189467239 + MER67C LTR ERV1 169 506 -8 255 308 51 92 chr5 10164406 10164512 -189465638 - MLT1K LTR MaLR -398 190 94 417 243 27 18 chr5 10164512 10164623 -189465527 - MER81 DNA DNA -2 112 1 255 308 51 92 chr5 10164623 10164711 -189465439 - MLT1K LTR MaLR -494 94 4 21 82 0 0 chr5 10164793 10164842 -189465308 + AT_rich Low_complexity Low_complexity 1 49 0 4697 193 10 8 chr5 10166407 10167324 -189462826 + MER49 LTR ERV1 5 923 0 1809 227 45 16 chr5 10167437 10167882 -189462268 + MLT1C LTR MaLR 1 458 -9 1288 145 94 86 chr5 10168851 10169223 -189460927 + THE1C LTR MaLR 1 375 0 492 219 41 41 chr5 10169887 10170056 -189460094 - MER89 LTR ERV1 -390 169 1 1230 260 38 30 chr5 10172017 10172544 -189457606 - L1M4 LINE L1 -822 5324 4794 1017 216 155 4 chr5 10173784 10174048 -189456102 + MLT2D LTR ERVL 92 395 -19 232 182 23 0 chr5 10174079 10174123 -189456027 + MLT2D LTR ERVL 510 554 0 452 312 144 10 chr5 10174127 10174425 -189455725 + LTR16A LTR ERVL 25 362 -88 844 61 0 0 chr5 10175381 10175495 -189454655 - L1PA4 LINE L1 0 6155 6042 772 227 62 27 chr5 10176953 10177213 -189452937 + L1MA9 LINE L1 5961 6229 -83 478 78 0 111 chr5 10177213 10177263 -189452887 - MADE1 DNA Mariner 0 80 43 1018 52 22 0 chr5 10177263 10177398 -189452752 + L1PA4 LINE L1 6017 6154 -1 478 78 0 111 chr5 10177398 10177437 -189452713 - MADE1 DNA Mariner -37 43 1 284 75 0 0 chr5 10177437 10177477 -189452673 + L1MA9 LINE L1 6234 6273 -39 1929 187 37 8 chr5 10177515 10177894 -189452256 + MLT1B LTR MaLR 1 390 0 23 54 0 0 chr5 10178065 10178102 -189452048 + AT_rich Low_complexity Low_complexity 1 37 0 203 208 0 19 chr5 10179511 10179564 -189450586 + (TTAAA)n Simple_repeat Simple_repeat 5 56 0 25 31 0 0 chr5 10179872 10179904 -189450246 + AT_rich Low_complexity Low_complexity 1 32 0 1936 223 31 119 chr5 10180011 10180773 -189449377 - L1MA6 LINE L1 -182 6118 5424 1578 180 20 8 chr5 10180767 10181178 -189448972 + L1MA6 LINE L1 5008 5423 -743 * 1447 39 6 0 chr5 10182435 10182613 -189447537 + L1PA4 LINE L1 5975 6153 -2 197 392 108 0 chr5 10183125 10183255 -189446895 - L2 LINE L2 -2 3270 3127 2248 183 48 101 chr5 10183428 10183481 -189446669 - MLT2B3 LTR ERVL 0 554 500 416 51 17 0 chr5 10183481 10183540 -189446610 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 2248 183 48 101 chr5 10183540 10183946 -189446204 - MLT2B3 LTR ERVL -54 500 74 1118 67 11 11 chr5 10183946 10184126 -189446024 + (CA)n Simple_repeat Simple_repeat 1 180 0 2248 183 48 101 chr5 10184126 10184173 -189445977 - MLT2B3 LTR ERVL -480 74 78 1106 71 0 22 chr5 10184173 10184356 -189445794 + (CA)n Simple_repeat Simple_repeat 2 180 0 2248 183 48 101 chr5 10184356 10184431 -189445719 - MLT2B3 LTR ERVL -475 79 2 264 318 35 0 chr5 10184443 10184528 -189445622 - MIR SINE MIR -127 135 48 3714 52 2 0 chr5 10185406 10185871 -189444279 + L1PA5 LINE L1 5684 6149 -5 2831 124 16 2 chr5 10185951 10186404 -189443746 - L1PA15 LINE L1 -2 6163 5705 668 150 53 0 chr5 10186404 10186517 -189443633 + L1PA15 LINE L1 5558 5676 -489 2116 80 0 0 chr5 10190573 10190849 -189439301 + AluY SINE Alu 32 307 -4 274 261 0 0 chr5 10192155 10192220 -189437930 + L1MB7 LINE L1 17 81 -6461 * 374 229 28 50 chr5 10192205 10192384 -189437766 + L1MB7 LINE L1 3741 3915 -2729 513 220 97 113 chr5 10192384 10192640 -189437510 + MLT1D LTR MaLR 1 271 -196 2192 207 47 11 chr5 10192640 10193176 -189436974 + L1MB7 LINE L1 6058 6612 -70 4042 190 23 8 chr5 10193199 10194282 -189435868 - L1PB4 LINE L1 -109 6047 4953 1080 228 30 0 chr5 10194285 10194522 -189435628 + L1PB4 LINE L1 4712 4955 -1191 256 247 78 13 chr5 10194801 10194878 -189435272 + MIR SINE MIR 31 112 -150 2130 151 81 3 chr5 10194882 10195265 -189434885 + MLT2C2 LTR ERVL 4 416 -48 288 0 0 0 chr5 10195276 10195308 -189434842 + (TG)n Simple_repeat Simple_repeat 1 32 0 1696 148 22 94 chr5 10196366 10196590 -189433560 - THE1C LTR MaLR 0 375 191 2080 130 3 0 chr5 10196590 10196890 -189433260 + AluSq SINE Alu 1 301 -12 1696 148 22 94 chr5 10196890 10197069 -189433081 - THE1C LTR MaLR -184 191 1 3435 118 84 16 chr5 10197375 10197925 -189432225 + LTR18B LTR ERVL 1 587 -27 2205 170 29 12 chr5 10198742 10198769 -189431381 - MSTA LTR MaLR 0 428 403 15867 66 3 9 chr5 10198769 10201661 -189428489 + L1PA6 LINE L1 3246 6154 0 2205 170 29 12 chr5 10201661 10202051 -189428099 - MSTA LTR MaLR -25 403 4 4825 165 14 19 chr5 10202053 10203045 -189427105 - L1PA16 LINE L1 -29 6137 5151 32 26 0 0 chr5 10203529 10203568 -189426582 + AT_rich Low_complexity Low_complexity 1 39 0 390 344 59 43 chr5 10204322 10204697 -189425453 + L1MC/D LINE L1 5428 5808 -2000 256 236 18 0 chr5 10204817 10204927 -189425223 + (TA)n Simple_repeat Simple_repeat 1 112 0 200 294 0 16 chr5 10205110 10205236 -189424914 + (TATG)n Simple_repeat Simple_repeat 1 124 0 320 266 11 57 chr5 10205244 10205421 -189424729 - L1M4 LINE L1 -2291 3855 3687 1520 235 11 16 chr5 10206300 10206678 -189423472 - L1MD1 LINE L1 -127 6115 5740 468 323 22 36 chr5 10207654 10207877 -189422273 - MIR SINE MIR -38 224 5 224 333 15 68 chr5 10208094 10208226 -189421924 + L2 LINE L2 3148 3272 0 235 258 21 86 chr5 10208504 10208597 -189421553 - L2 LINE L2 -17 3255 3169 296 309 103 7 chr5 10208629 10208765 -189421385 + MIR SINE MIR 53 201 -61 1675 215 67 0 chr5 10208895 10209341 -189420809 + L1PA16 LINE L1 4888 5363 -783 588 107 0 0 chr5 10209345 10209429 -189420721 + AluS SINE Alu 1 84 -228 4055 127 43 1 chr5 10209429 10210168 -189419982 + L1PA16 LINE L1 5355 6163 0 24 0 0 0 chr5 10211300 10211324 -189418826 + AT_rich Low_complexity Low_complexity 1 24 0 234 227 61 0 chr5 10211425 10211491 -189418659 + MER5B DNA MER1_type 109 178 0 1905 114 54 14 chr5 10212165 10212462 -189417688 + AluSc SINE Alu 1 309 0 1076 161 0 0 chr5 10212490 10212652 -189417498 + AluSg/x SINE Alu 137 298 -14 2258 64 16 13 chr5 10214103 10214417 -189415733 + L1PA5 LINE L1 5839 6153 -1 844 220 38 19 chr5 10214622 10214831 -189415319 - MER20 DNA MER1_type 0 219 7 180 300 20 0 chr5 10215297 10215347 -189414803 - MIR SINE MIR -204 58 8 231 308 57 6 chr5 10215461 10215620 -189414530 - L1M4 LINE L1 -1446 4700 4534 26 93 0 0 chr5 10216774 10216849 -189413301 + AT_rich Low_complexity Low_complexity 1 75 0 1196 213 84 58 chr5 10216878 10217258 -189412892 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr5 10217323 10217344 -189412806 + AT_rich Low_complexity Low_complexity 1 21 0 303 204 151 11 chr5 10217954 10218047 -189412103 + L2 LINE L2 1878 1983 -1331 2449 71 0 3 chr5 10218053 10218361 -189411789 - AluY SINE Alu -2 309 3 1076 76 0 0 chr5 10218363 10218495 -189411655 - AluY SINE Alu -177 134 3 860 351 114 24 chr5 10218501 10218642 -189411508 + L2 LINE L2 1989 2116 -1197 270 0 0 0 chr5 10218642 10218672 -189411478 + (TTG)n Simple_repeat Simple_repeat 2 31 0 860 351 114 24 chr5 10218672 10219713 -189410437 + L2 LINE L2 2116 3278 -35 423 342 53 22 chr5 10219721 10219946 -189410204 - MIR SINE MIR -3 259 28 248 28 56 0 chr5 10219951 10219987 -189410163 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 292 146 135 67 chr5 10220993 10221082 -189409068 - L1PA16 LINE L1 0 6166 6072 23 0 0 0 chr5 10221301 10221324 -189408826 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr5 10221361 10221394 -189408756 + AT_rich Low_complexity Low_complexity 1 33 0 30 45 0 0 chr5 10222393 10222437 -189407713 + AT_rich Low_complexity Low_complexity 1 44 0 22 56 0 0 chr5 10222556 10222592 -189407558 + AT_rich Low_complexity Low_complexity 1 36 0 210 71 0 0 chr5 10223554 10223582 -189406568 + (TA)n Simple_repeat Simple_repeat 2 29 0 315 320 135 38 chr5 10225119 10225820 -189404330 - L2 LINE L2 -10 3262 2469 210 240 40 0 chr5 10225834 10225884 -189404266 - MER91 DNA MER1_type -14 126 75 223 343 33 47 chr5 10226435 10226648 -189403502 - L2 LINE L2 -1412 1902 1693 1317 216 65 23 chr5 10227475 10227826 -189402324 + MLT1A2 LTR MaLR 5 370 -4 603 234 21 0 chr5 10227898 10228039 -189402111 - MER20 DNA MER1_type 0 219 76 219 88 0 0 chr5 10228259 10228293 -189401857 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 203 152 22 0 chr5 10229131 10229177 -189400973 + CT-rich Low_complexity Low_complexity 1 47 0 255 244 139 23 chr5 10229193 10229279 -189400871 + L2 LINE L2 3203 3298 -15 566 261 6 28 chr5 10229504 10229680 -189400470 + L1MD2 LINE L1 5826 5997 -362 587 275 17 78 chr5 10229698 10229993 -189400157 + L1MD2 LINE L1 6070 6346 -13 2126 161 131 47 chr5 10230853 10231363 -189398787 + MLT2B3 LTR ERVL 1 553 -1 2544 248 61 24 chr5 10231363 10231590 -189398560 + ERVL-B3 LTR ERVL 4 221 -5264 1824 229 46 64 chr5 10231590 10232154 -189397996 + MLT2B3 LTR ERVL 1 554 0 2544 248 61 24 chr5 10232154 10232167 -189397983 + ERVL-B3 LTR ERVL 221 232 -5253 2102 191 33 5 chr5 10232167 10232587 -189397563 + MSTB1 LTR MaLR 1 432 0 2544 248 61 24 chr5 10232587 10233077 -189397073 + ERVL-B3 LTR ERVL 232 731 -4754 537 82 0 0 chr5 10233084 10233157 -189396993 + L1PA13 LINE L1 6083 6155 -8 3432 208 38 5 chr5 10233158 10234483 -189395667 + ERVL-B3 LTR ERVL 996 2405 -3359 565 221 17 88 chr5 10234483 10234664 -189395486 - MER68 LTR ERV1 -365 197 30 510 85 0 24 chr5 10235436 10235518 -189394632 - L1PA6 LINE L1 0 6154 6075 3956 226 13 41 chr5 10235647 10236662 -189393488 + MER45B DNA AcHobo 1 986 -54 2150 151 70 51 chr5 10236666 10237097 -189393053 + ERVL-B3 LTR ERVL 2402 2840 -2924 * 2278 168 5 10 chr5 10237095 10237488 -189392662 + ERVL LTR ERVL 5039 5429 -335 1731 249 35 5 chr5 10237609 10238039 -189392111 + MER68 LTR ERV1 120 562 0 240 319 83 56 chr5 10238268 10238412 -189391738 + L2 LINE L2 2608 2755 -559 246 169 89 81 chr5 10239654 10239778 -189390372 + MER54B LTR ERVL 339 463 -330 21 57 0 0 chr5 10240938 10240973 -189389177 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr5 10241106 10241149 -189389001 + AT_rich Low_complexity Low_complexity 1 43 0 3441 309 83 28 chr5 10241197 10241937 -189388213 - L2 LINE L2 -498 2816 2118 1732 181 40 27 chr5 10241937 10242307 -189387843 - THE1C LTR MaLR 0 375 1 3441 309 83 28 chr5 10242307 10242856 -189387294 - L2 LINE L2 -1196 2118 1420 1993 140 46 6 chr5 10242856 10243206 -189386944 + THE1B LTR MaLR 1 364 0 3441 309 83 28 chr5 10243206 10243512 -189386638 - L2 LINE L2 -1894 1420 1132 422 326 77 11 chr5 10245446 10245964 -189384186 - MLT1G1 LTR MaLR -2 588 5 4512 176 37 11 chr5 10246351 10246727 -189383423 - L1PB4 LINE L1 -3 6153 5788 184 59 59 0 chr5 10246727 10246761 -189383389 + (TA)n Simple_repeat Simple_repeat 1 36 0 4512 176 37 11 chr5 10246761 10247442 -189382708 - L1PB4 LINE L1 -368 5788 5068 1560 211 6 3 chr5 10247445 10247782 -189382368 + L1 LINE L1 4697 5034 -1112 26 88 0 0 chr5 10249134 10249202 -189380948 + AT_rich Low_complexity Low_complexity 1 68 0 188 342 72 18 chr5 10250342 10250453 -189379697 + MIR3 SINE MIR 79 195 -13 1476 257 31 21 chr5 10250619 10251230 -189378920 - L1M4 LINE L1 -3025 3121 2505 23 33 0 0 chr5 10251923 10251953 -189378197 + AT_rich Low_complexity Low_complexity 1 30 0 512 312 23 23 chr5 10252852 10253067 -189377083 + MIR SINE MIR 48 262 0 22 0 0 0 chr5 10253459 10253481 -189376669 + AT_rich Low_complexity Low_complexity 1 22 0 546 169 0 0 chr5 10253502 10253591 -189376559 - MSTB1 LTR MaLR -50 382 294 2023 141 0 0 chr5 10253617 10253900 -189376250 + AluSx SINE Alu 1 283 -29 484 15 31 0 chr5 10254098 10254163 -189375987 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 1678 99 13 115 chr5 10254981 10255321 -189374829 + AluSx SINE Alu 1 308 0 442 329 103 26 chr5 10255468 10255778 -189374372 + L2 LINE L2 2976 3309 -4 2670 240 68 22 chr5 10255949 10256802 -189373348 - L1ME1 LINE L1 -5 6161 5270 387 264 54 0 chr5 10256825 10256954 -189373196 - L1ME1 LINE L1 -992 5154 5019 2068 224 154 8 chr5 10257279 10257878 -189372272 - MER76 LTR ERV -1 687 2 1264 226 25 14 chr5 10258621 10258900 -189371250 + AluJo SINE Alu 1 282 -30 309 26 0 0 chr5 10258904 10258942 -189371208 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 888 58 0 16 chr5 10260317 10260438 -189369712 + L1PA6 LINE L1 6036 6154 0 2131 65 25 11 chr5 10261489 10261765 -189368385 + AluY SINE Alu 15 294 -17 180 0 0 0 chr5 10263245 10263265 -189366885 + (A)n Simple_repeat Simple_repeat 1 20 0 221 297 116 43 chr5 10264231 10264369 -189365781 + MIR SINE MIR 66 213 -49 22 0 0 0 chr5 10265693 10265715 -189364435 + AT_rich Low_complexity Low_complexity 1 22 0 8527 36 1 1 chr5 10266310 10268094 -189362056 + L1PA5 LINE L1 4358 6141 -13 2541 58 9 6 chr5 10268690 10269017 -189361133 + L1PA7 LINE L1 5822 6149 -5 1869 291 25 32 chr5 10269824 10270547 -189359603 - L1MEc LINE L1 -5643 753 36 2670 51 0 0 chr5 10271257 10271568 -189358582 - AluY SINE Alu 0 311 1 1605 142 103 14 chr5 10272023 10272304 -189357846 + AluSx SINE Alu 1 306 -6 418 263 10 0 chr5 10272616 10272715 -189357435 - MLT2E LTR ERVL -476 152 53 2142 120 10 98 chr5 10273530 10273929 -189356221 + THE1B LTR MaLR 1 364 0 360 265 63 63 chr5 10276940 10277129 -189353021 - L1MEd LINE L1 -4678 1728 1540 1944 118 11 0 chr5 10277158 10277430 -189352720 - AluSx SINE Alu -37 275 1 243 110 64 18 chr5 10277598 10277707 -189352443 + (TA)n Simple_repeat Simple_repeat 1 114 0 387 292 42 28 chr5 10277711 10277938 -189352212 - L1MEd LINE L1 -5004 1392 1152 235 189 19 0 chr5 10277987 10278040 -189352110 - L1PA16 LINE L1 0 6166 6113 2971 116 32 26 chr5 10278043 10278461 -189351689 - L1P4 LINE L1 -407 5758 5332 1768 102 87 26 chr5 10278461 10278747 -189351403 - AluSp SINE Alu 0 306 5 2971 116 32 26 chr5 10278747 10278868 -189351282 - L1P4 LINE L1 -833 5332 5213 26 30 0 0 chr5 10278881 10278914 -189351236 + AT_rich Low_complexity Low_complexity 1 33 0 299 279 60 67 chr5 10280053 10280322 -189349828 - MLT1J LTR MaLR -2 509 243 6942 26 1 1 chr5 10281298 10282114 -189348036 - L1PA4 LINE L1 -1 6154 5339 6547 41 5 0 chr5 10282109 10282917 -189347233 + L1PA4 LINE L1 4515 5326 -820 * 1216 221 12 24 chr5 10283082 10283335 -189346815 - Tigger3(Golem) DNA MER2_type -2778 251 2 22 0 0 0 chr5 10284184 10284206 -189345944 + AT_rich Low_complexity Low_complexity 1 22 0 186 333 30 0 chr5 10284208 10284274 -189345876 + L2 LINE L2 3205 3272 0 1836 132 92 7 chr5 10284649 10284930 -189345220 - AluSx SINE Alu -6 306 2 318 294 55 14 chr5 10285176 10285322 -189344828 - MLT1I LTR MaLR 0 409 258 255 223 160 11 chr5 10285588 10285682 -189344468 + MIR SINE MIR 137 244 -18 2175 225 89 20 chr5 10285734 10286395 -189343755 - Tigger7 DNA MER2_type -14 2573 1 222 304 0 0 chr5 10286395 10286507 -189343643 + (TAG)n Simple_repeat Simple_repeat 1 112 0 507 260 0 0 chr5 10286531 10286708 -189343442 + (TAG)n Simple_repeat Simple_repeat 2 178 0 354 316 14 29 chr5 10287000 10287139 -189343011 + MIR SINE MIR 107 243 -19 620 224 162 25 chr5 10287405 10287862 -189342288 - L1M LINE L1 -752 5394 4899 303 353 22 0 chr5 10288142 10288281 -189341869 - L1ME LINE L1 -453 5668 5527 2406 83 0 16 chr5 10288935 10289247 -189340903 + AluSp SINE Alu 1 307 -6 827 317 53 36 chr5 10290413 10290886 -189339264 - MLT1H LTR MaLR -54 495 15 1758 175 25 22 chr5 10292620 10292986 -189337164 + THE1C LTR MaLR 5 371 -4 198 261 171 27 chr5 10293151 10293262 -189336888 + L3 LINE CR1 1188 1314 -263 1329 223 62 30 chr5 10293296 10293508 -189336642 - MLT1B LTR MaLR 0 390 159 2186 100 7 16 chr5 10293508 10293817 -189336333 - AluSc SINE Alu -3 306 1 1329 223 62 30 chr5 10293817 10293977 -189336173 - MLT1B LTR MaLR -231 159 6 253 88 0 0 chr5 10295768 10295802 -189334348 + (GA)n Simple_repeat Simple_repeat 2 35 0 558 240 0 0 chr5 10295803 10295953 -189334197 + GA-rich Low_complexity Low_complexity 3 152 0 243 0 0 0 chr5 10297148 10297175 -189332975 + (CA)n Simple_repeat Simple_repeat 2 28 0 231 146 0 0 chr5 10297246 10297287 -189332863 + (CA)n Simple_repeat Simple_repeat 2 42 0 22 0 0 0 chr5 10298759 10298781 -189331369 + AT_rich Low_complexity Low_complexity 1 22 0 43376 46 4 1 chr5 10299708 10305855 -189324295 + L1PA4 LINE L1 1 6165 0 729 318 108 31 chr5 10306541 10307057 -189323093 - L2 LINE L2 -1002 2312 1757 245 247 0 13 chr5 10307114 10307191 -189322959 + (CATATA)n Simple_repeat Simple_repeat 5 80 0 12950 58 10 12 chr5 10307194 10309123 -189321027 - HERVL LTR ERVL -344 5310 3368 2516 89 10 79 chr5 10309791 10310196 -189319954 - MER51B LTR ERV1 0 377 1 23 33 0 0 chr5 10310215 10310245 -189319905 + AT_rich Low_complexity Low_complexity 1 30 0 328 317 36 48 chr5 10310616 10310825 -189319325 + MIR SINE MIR 42 252 -10 1426 227 51 17 chr5 10311398 10311643 -189318507 - MLT1A1 LTR MaLR 0 365 103 2233 116 33 25 chr5 10311643 10312004 -189318146 + THE1B LTR MaLR 1 364 0 1426 227 51 17 chr5 10312004 10312111 -189318039 - MLT1A1 LTR MaLR -262 103 1 22 35 0 0 chr5 10312609 10312638 -189317512 + AT_rich Low_complexity Low_complexity 1 29 0 1333 192 73 0 chr5 10312871 10313173 -189316977 - L1MC1 LINE L1 -2 6331 6008 5662 26 0 0 chr5 10313476 10314177 -189315973 - L1PA3 LINE L1 -1303 4843 4143 7550 28 3 0 chr5 10314177 10315556 -189314594 + L1PA3 LINE L1 4818 6155 0 220 156 44 0 chr5 10316579 10316624 -189313526 + CT-rich Low_complexity Low_complexity 2 48 0 1089 226 8 25 chr5 10317118 10317357 -189312793 - AluJo SINE Alu -13 299 65 2080 131 0 0 chr5 10317444 10317741 -189312409 - AluSx SINE Alu -15 297 1 11187 23 0 0 chr5 10318264 10319635 -189310515 - L1P LINE L1 -1421 4725 3355 3981 0 0 0 chr5 10319636 10320096 -189310054 + L1HS LINE L1 5696 6155 0 244 36 0 125 chr5 10320096 10320152 -189309998 + (A)n Simple_repeat Simple_repeat 1 49 0 2290 210 56 26 chr5 10320594 10321237 -189308913 + L1MC3 LINE L1 6813 7474 -311 2265 189 8 8 chr5 10321236 10321733 -189308417 - L1PA15 LINE L1 -1052 5094 4598 * 4868 148 29 22 chr5 10321742 10322795 -189307355 + L1PA15 LINE L1 5104 6161 -4 742 195 52 108 chr5 10322828 10323172 -189306978 + L1MC3 LINE L1 7461 7785 0 480 273 18 0 chr5 10323349 10323459 -189306691 - MER5B DNA MER1_type -60 118 7 181 402 0 12 chr5 10323510 10323592 -189306558 + MER5A DNA MER1_type 7 87 -102 343 278 56 9 chr5 10323773 10323881 -189306269 - MIR SINE MIR -73 189 77 195 42 0 0 chr5 10323913 10323937 -189306213 + (CA)n Simple_repeat Simple_repeat 1 24 0 1019 161 62 45 chr5 10323955 10324198 -189305952 + MER2 DNA MER2_type 48 294 -51 488 172 66 0 chr5 10325186 10325308 -189304842 - L1MA7 LINE L1 0 6291 6162 2500 66 0 0 chr5 10325362 10325665 -189304485 - AluY SINE Alu -8 303 1 213 219 0 0 chr5 10325990 10326063 -189304087 + (TG)n Simple_repeat Simple_repeat 1 73 0 1339 233 23 19 chr5 10326128 10326555 -189303595 + MLT2B1 LTR ERVL 1 478 -42 414 196 14 14 chr5 10326555 10326703 -189303447 + (TCTA)n Simple_repeat Simple_repeat 4 151 0 215 180 33 0 chr5 10326718 10326779 -189303371 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 354 143 0 0 chr5 10326786 10326849 -189303301 + MLT2B1 LTR ERVL 458 520 0 3426 104 40 2 chr5 10327611 10328132 -189302018 - L1PA13 LINE L1 -5 6158 5618 1319 219 45 31 chr5 10328357 10328717 -189301433 + MLT1A2 LTR MaLR 5 462 -5 206 297 36 9 chr5 10328850 10328961 -189301189 + CT-rich Low_complexity Low_complexity 5 118 0 1863 132 76 20 chr5 10329130 10329485 -189300665 + THE1C LTR MaLR 1 375 0 8384 141 54 27 chr5 10329485 10330056 -189300094 + THE1B-int LTR MaLR 1 556 -1024 2131 127 11 50 chr5 10330056 10330435 -189299715 + THE1B LTR MaLR 1 364 0 10538 125 11 2 chr5 10330435 10332000 -189298150 + THE1B-int LTR MaLR 1 1580 0 2047 156 11 32 chr5 10332000 10332372 -189297778 + THE1B LTR MaLR 1 364 0 8384 141 54 27 chr5 10332372 10333329 -189296821 + THE1B-int LTR MaLR 555 1571 -9 1199 140 82 27 chr5 10333329 10333586 -189296564 + THE1C LTR MaLR 105 375 0 423 312 84 5 chr5 10333590 10333792 -189296358 + MIR SINE MIR 34 251 -11 26 50 0 0 chr5 10333811 10333851 -189296299 + AT_rich Low_complexity Low_complexity 1 40 0 1637 172 22 0 chr5 10333861 10334171 -189295979 - AluSx SINE Alu 0 319 4 4922 55 19 0 chr5 10334259 10334880 -189295270 - L1PA8 LINE L1 -4 6168 5536 2344 111 13 21 chr5 10335168 10335546 -189294604 - THE1C LTR MaLR 0 375 1 322 245 6 6 chr5 10335627 10335790 -189294360 + (TA)n Simple_repeat Simple_repeat 1 163 0 263 28 28 0 chr5 10335854 10335890 -189294260 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 949 152 81 113 chr5 10335915 10336224 -189293926 + AluJo SINE Alu 2 300 -2 22 0 0 0 chr5 10337122 10337144 -189293006 + AT_rich Low_complexity Low_complexity 1 22 0 1190 213 55 22 chr5 10339473 10339866 -189290284 - MER54B LTR ERVL 0 793 488 934 266 145 0 chr5 10340632 10340921 -189289229 + LTR40a LTR ERVL 2 332 -187 21 36 0 0 chr5 10340939 10340967 -189289183 + AT_rich Low_complexity Low_complexity 1 28 0 242 328 158 28 chr5 10341028 10341275 -189288875 + L3 LINE CR1 1291 1569 -8 238 237 53 0 chr5 10341589 10341665 -189288485 + L1ME1 LINE L1 6064 6143 -23 2077 140 0 0 chr5 10341742 10342050 -189288100 + AluSx SINE Alu 4 311 -1 194 380 87 39 chr5 10342367 10342596 -189287554 - MIR SINE MIR -15 247 8 1871 17 13 0 chr5 10344343 10344576 -189285574 + L1PA4 LINE L1 4203 4438 -1708 * 7225 21 0 3 chr5 10344574 10345786 -189284364 + L1PA4 LINE L1 4927 6135 -20 252 0 0 0 chr5 10345790 10345818 -189284332 + (TAA)n Simple_repeat Simple_repeat 3 30 0 2045 105 24 14 chr5 10346250 10346545 -189283605 - AluSx SINE Alu -4 308 11 2276 108 7 0 chr5 10347065 10347371 -189282779 - AluSg SINE Alu -2 308 1 536 368 51 21 chr5 10347934 10348646 -189281504 - L2 LINE L2 -220 3093 2361 393 312 162 34 chr5 10348702 10349328 -189280822 + L2 LINE L2 2462 3176 -137 190 308 0 19 chr5 10349455 10349507 -189280643 + L2 LINE L2 3207 3257 -15 805 217 76 38 chr5 10351148 10351509 -189278641 + Zaphod DNA AcHobo 511 896 -3135 2098 127 0 16 chr5 10351509 10351823 -189278327 - AluSx SINE Alu -3 309 1 805 217 76 38 chr5 10351823 10351935 -189278215 + Zaphod DNA AcHobo 896 1002 -3029 453 226 21 153 chr5 10352056 10352210 -189277940 + Zaphod DNA AcHobo 3735 3821 -210 1469 186 116 3 chr5 10352210 10352537 -189277613 - MLT1A1 LTR MaLR -1 364 1 453 226 21 153 chr5 10352537 10352722 -189277428 + Zaphod DNA AcHobo 3821 4029 -2 266 321 50 25 chr5 10353105 10353264 -189276886 + MIR SINE MIR 90 252 -10 3082 73 7 0 chr5 10353315 10353726 -189276424 - L1PA7 LINE L1 -1 6153 5740 347 281 79 26 chr5 10354324 10354438 -189275712 - L2 LINE L2 -1 3312 3193 1900 198 8 6 chr5 10354705 10355069 -189275081 + MLT1A1 LTR MaLR 1 365 0 705 196 23 6 chr5 10355536 10355862 -189274288 + CT-rich Low_complexity Low_complexity 1 331 0 941 166 0 143 chr5 10355864 10356087 -189274063 - AluJb SINE Alu -38 274 84 367 270 85 18 chr5 10356713 10356878 -189273272 - MLT1H LTR MaLR -339 210 57 364 112 45 79 chr5 10358266 10358355 -189271795 + L1MA7 LINE L1 6206 6291 0 301 194 56 56 chr5 10358363 10358471 -189271679 + L1MC/D LINE L1 5705 5812 -309 585 178 23 11 chr5 10359385 10359559 -189270591 + CT-rich Low_complexity Low_complexity 1 176 0 1919 148 7 3 chr5 10359639 10359949 -189270201 + AluSx SINE Alu 1 311 -1 300 294 96 7 chr5 10360168 10360314 -189269836 - HAL1 LINE L1 -2304 203 45 379 335 62 52 chr5 10361484 10361809 -189268341 + L1MEd LINE L1 1011 1338 -5078 1098 280 97 42 chr5 10361845 10362363 -189267787 - MLT1G LTR MaLR -11 579 34 505 303 104 66 chr5 10362415 10363017 -189267133 + L1MEd LINE L1 1203 2028 -4579 2632 137 24 9 chr5 10363126 10363548 -189266602 + MSTA LTR MaLR 1 428 0 2086 205 42 34 chr5 10365591 10365797 -189264353 - L1MA9 LINE L1 -323 5989 5786 249 83 0 0 chr5 10365797 10365833 -189264317 + (CA)n Simple_repeat Simple_repeat 2 37 0 2086 205 42 34 chr5 10365833 10366123 -189264027 - L1MA9 LINE L1 -526 5786 5489 966 253 98 7 chr5 10366126 10366431 -189263719 + L1 LINE L1 3898 4230 -1916 810 215 48 16 chr5 10366718 10366904 -189263246 - MER20 DNA MER1_type 0 219 28 233 222 19 19 chr5 10367302 10367356 -189262794 + L1M3c LINE L1 2 55 -6086 482 343 0 52 chr5 10367540 10367951 -189262199 + L1M3c LINE L1 50 493 -5638 228 349 0 15 chr5 10368140 10368206 -189261944 + L1M3de LINE L1 280 344 -6309 232 246 46 62 chr5 10368244 10368309 -189261841 + L1M3de LINE L1 927 990 -5663 254 309 52 10 chr5 10368339 10368436 -189261714 + L1M3de LINE L1 915 1015 -5638 259 306 47 12 chr5 10368454 10368539 -189261611 + L1 LINE L1 278 365 -6288 4105 280 34 26 chr5 10368568 10370131 -189260019 + L1 LINE L1 935 2137 -4516 4711 241 70 14 chr5 10370265 10372123 -189258027 + L1MC/D LINE L1 2074 4324 -2058 1008 94 29 0 chr5 10372123 10372293 -189257857 + GA-rich Low_complexity Low_complexity 1 175 0 4711 241 70 14 chr5 10372293 10373502 -189256648 + L1MC/D LINE L1 4324 5464 -918 402 197 0 0 chr5 10373522 10373593 -189256557 + MER2 DNA MER2_type 31 101 -244 5839 234 13 2 chr5 10373594 10375032 -189255118 - L1 LINE L1 -2271 4461 3008 2338 201 2 16 chr5 10375048 10375565 -189254585 + L1 LINE L1 4494 5003 -1729 1842 165 73 3 chr5 10375565 10375905 -189254245 + THE1B LTR MaLR 1 364 0 6542 127 10 52 chr5 10375905 10377005 -189253145 + THE1B-int LTR MaLR 1 1054 -526 1781 121 19 29 chr5 10377006 10377313 -189252837 + L1PB1 LINE L1 5840 6143 -8 277 253 94 44 chr5 10377439 10377651 -189252499 + L1MC/D LINE L1 5555 5773 -629 260 303 58 53 chr5 10377984 10378192 -189251958 - L1MC/D LINE L1 -2034 6168 5960 4683 170 45 8 chr5 10378207 10379227 -189250923 - L1MA7 LINE L1 -5 6286 5228 640 193 135 66 chr5 10379229 10379473 -189250677 - MER2 DNA MER2_type 0 345 85 5717 168 22 6 chr5 10379489 10381460 -189248690 - L1PB1 LINE L1 0 6151 4150 386 282 64 11 chr5 10381467 10381655 -189248495 - L1MC/D LINE L1 -984 5556 5359 286 297 24 36 chr5 10381917 10382082 -189248068 - L1MC/D LINE L1 -4554 2167 2005 407 302 41 18 chr5 10382086 10382255 -189247895 - L1MC/D LINE L1 -4722 1818 1646 4727 166 13 1 chr5 10382545 10383367 -189246783 + L1PA16 LINE L1 5329 6160 -6 242 325 98 41 chr5 10383387 10383581 -189246569 - L2 LINE L2 -101 3212 3008 218 291 13 25 chr5 10383575 10383654 -189246496 + L2 LINE L2 2246 2323 -991 * 3786 160 50 21 chr5 10383655 10384356 -189245794 + MER50 LTR ERV1 1 721 -13 246 270 124 0 chr5 10384372 10384461 -189245689 + L2 LINE L2 2346 2445 -869 747 302 88 36 chr5 10384534 10384954 -189245196 - L1MC/D LINE L1 -5926 795 354 1734 165 132 26 chr5 10385348 10385735 -189244415 + MSTA LTR MaLR 1 428 0 8620 167 11 34 chr5 10385737 10387352 -189242798 + MSTA-int LTR MaLR 3 1580 0 1739 185 125 10 chr5 10387352 10387736 -189242414 + MSTA LTR MaLR 1 428 0 731 203 0 0 chr5 10388176 10388309 -189241841 + FLAM_A SINE Alu 1 133 0 4666 222 54 7 chr5 10388397 10390094 -189240056 - L1MC1 LINE L1 -19 6314 4533 4209 257 37 37 chr5 10390090 10390131 -189240019 - L1MC1 LINE L1 -1899 4247 4207 * 2517 146 41 2 chr5 10390131 10390543 -189239607 + MSTA LTR MaLR 1 428 0 4209 257 37 37 chr5 10390543 10391854 -189238296 - L1MC1 LINE L1 -1939 4207 2892 1500 162 25 0 chr5 10391854 10392138 -189238012 - L1MA3 LINE L1 -2 6303 6013 4209 257 37 37 chr5 10392138 10392506 -189237644 - L1MC1 LINE L1 -3253 2893 2526 2163 180 34 24 chr5 10392506 10392633 -189237517 + MSTA LTR MaLR 2 126 -302 1325 154 57 124 chr5 10392633 10392801 -189237349 + THE1C LTR MaLR 1 179 -196 1855 121 23 4 chr5 10392801 10393066 -189237084 - AluSq SINE Alu -14 299 30 1325 154 57 124 chr5 10393066 10393299 -189236851 + THE1C LTR MaLR 179 375 0 2163 180 34 24 chr5 10393299 10393588 -189236562 + MSTA LTR MaLR 126 422 -6 201 154 0 0 chr5 10393663 10393702 -189236448 + (CA)n Simple_repeat Simple_repeat 2 40 0 25 31 0 0 chr5 10393838 10393870 -189236280 + AT_rich Low_complexity Low_complexity 1 32 0 2150 120 18 20 chr5 10395728 10396070 -189234080 - MER61A LTR ERV1 0 343 3 608 271 81 9 chr5 10396335 10396556 -189233594 + MIR SINE MIR 26 262 0 216 360 105 35 chr5 10396648 10396820 -189233330 - MIR3 SINE MIR -9 199 16 329 371 83 19 chr5 10397739 10398003 -189232147 + L2 LINE L2 2983 3263 -9 2477 101 2 78 chr5 10398141 10398549 -189231601 - MER51B LTR ERV1 0 377 1 1017 304 77 29 chr5 10398763 10399346 -189230804 + L1PBa LINE L1 168 778 -6085 442 101 217 0 chr5 10399346 10399415 -189230735 + THE1B LTR MaLR 1 84 -280 1552 246 33 35 chr5 10399456 10399879 -189230271 + L1PBa LINE L1 1218 1639 -5224 * 6114 215 31 22 chr5 10399848 10402197 -189227953 + L1PB3 LINE L1 5 2450 -3753 9355 194 17 10 chr5 10402202 10405341 -189224809 + L1PB3 LINE L1 3046 6209 -2 2413 86 0 0 chr5 10405680 10405981 -189224169 + AluY SINE Alu 1 301 -10 204 208 42 0 chr5 10407051 10407099 -189223051 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 374 245 141 52 chr5 10407620 10407869 -189222281 - L1M4 LINE L1 -775 5371 5101 192 354 25 56 chr5 10408025 10408186 -189221964 - L2 LINE L2 -499 2815 2660 718 264 123 82 chr5 10408786 10409296 -189220854 - MLT1G LTR MaLR 0 595 5 2056 132 0 3 chr5 10409556 10409843 -189220307 - AluSq SINE Alu -27 286 1 668 226 31 51 chr5 10411026 10411318 -189218832 + pTR5 LTR ERV1 743 1028 -1410 3123 134 22 146 chr5 10411496 10412282 -189217868 + LTR12 LTR ERV1 1 688 0 570 54 14 0 chr5 10412286 10412372 -189217778 + LTR12 LTR ERV1 307 690 -24 28 78 0 29 chr5 10417329 10417432 -189212718 + AT_rich Low_complexity Low_complexity 1 100 0 2301 237 61 15 chr5 10417736 10418322 -189211828 - MLT1E2 LTR MaLR -1 625 13 729 237 6 6 chr5 10419077 10419250 -189210900 - L1MA10 LINE L1 -1 6333 6161 1225 197 0 13 chr5 10420222 10420455 -189209695 - L1MC3 LINE L1 -259 7526 7297 210 71 0 0 chr5 10420455 10420483 -189209667 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 1547 143 13 0 chr5 10420485 10420723 -189209427 - AluSg/x SINE Alu -1 311 71 271 105 0 0 chr5 10420723 10420761 -189209389 - Alu SINE Alu -262 38 1 412 197 0 0 chr5 10420761 10420832 -189209318 - L1MC3 LINE L1 -483 7302 7232 684 264 150 48 chr5 10421838 10422258 -189207892 + LTR33A LTR ERVL 59 521 -2 180 135 0 0 chr5 10422485 10422522 -189207628 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 2230 216 16 26 chr5 10423320 10423825 -189206325 + MER89 LTR ERV1 60 559 0 181 382 0 0 chr5 10424467 10424483 -189205667 + L3 LINE CR1 1508 1523 -54 4524 95 2 0 chr5 10424483 10425074 -189205076 - L1PA13 LINE L1 0 6163 5572 181 382 0 0 chr5 10425074 10425125 -189205025 + L3 LINE CR1 1522 1575 -2 261 324 39 19 chr5 10425476 10425683 -189204467 + L3 LINE CR1 1179 1389 -188 924 221 36 29 chr5 10425710 10425991 -189204159 + L1MC3 LINE L1 7503 7785 0 312 238 143 8 chr5 10426818 10426874 -189203276 - L1MA10 LINE L1 -7 6327 6272 863 275 67 55 chr5 10426874 10427310 -189202840 - L1ME1 LINE L1 -74 6092 5652 5525 39 2 5 chr5 10427310 10427944 -189202206 - L1PA5 LINE L1 0 6154 5523 311 183 0 0 chr5 10427967 10428027 -189202123 - L1ME1 LINE L1 -494 5672 5613 6693 62 32 0 chr5 10478193 10479152 -189150998 - L1PA7 LINE L1 -1 6153 5177 489 81 14 0 chr5 10479152 10479226 -189150924 + L1PA7 LINE L1 5115 5189 -957 21 36 0 0 chr5 10480192 10480220 -189149930 + AT_rich Low_complexity Low_complexity 1 28 0 2471 98 136 2 chr5 10480306 10480703 -189149447 + L1PA14 LINE L1 5709 6158 -3 1768 186 49 46 chr5 10480705 10481181 -189148969 + L1M3 LINE L1 5248 5725 -455 2447 183 37 123 chr5 10481321 10482156 -189147994 + L1MB4 LINE L1 5418 6180 0 1364 116 0 54 chr5 10482290 10482514 -189147636 + AluSq SINE Alu 22 233 -80 1169 241 118 42 chr5 10482971 10483427 -189146723 - MER74A LTR ERVL -63 495 5 2239 156 5 39 chr5 10484393 10484835 -189145315 - L1MA4A LINE L1 -5 7000 6574 13063 194 75 38 chr5 10484935 10485179 -189144971 - L1MA4A LINE L1 -717 6288 6054 414 224 138 17 chr5 10485179 10485295 -189144855 - FLAM_C SINE Alu -2 131 2 13063 194 75 38 chr5 10485295 10491106 -189139044 - L1MA4A LINE L1 -951 6054 1 658 345 109 7 chr5 10493897 10494308 -189135842 - LTR33 LTR ERVL -68 453 1 2702 112 26 24 chr5 10494349 10494770 -189135380 + MSTA LTR MaLR 7 428 0 206 361 56 0 chr5 10494887 10494959 -189135191 + L2 LINE L2 3156 3231 -41 639 176 0 0 chr5 10494978 10495086 -189135064 + FLAM_A SINE Alu 15 122 -20 934 185 9 5 chr5 10495148 10495364 -189134786 - L1MA7 LINE L1 -10 6281 6065 215 195 65 39 chr5 10496124 10496201 -189133949 - MIR SINE MIR -56 206 128 408 337 27 11 chr5 10496412 10496596 -189133554 + MIR SINE MIR 8 194 -68 3173 224 41 0 chr5 10496971 10497649 -189132501 - MER54A LTR ERVL 0 901 196 588 237 179 12 chr5 10497920 10498224 -189131926 + L1MC4a LINE L1 5537 5750 -371 2477 80 0 0 chr5 10498813 10499124 -189131026 + AluY SINE Alu 1 311 0 1747 236 83 18 chr5 10500849 10501418 -189128732 - L1ME1 LINE L1 -20 6146 5541 5608 182 39 11 chr5 10501973 10502374 -189127776 - L1MA8 LINE L1 -96 6195 5807 315 0 0 0 chr5 10502374 10502409 -189127741 + (TG)n Simple_repeat Simple_repeat 2 36 0 5608 182 39 11 chr5 10502409 10503459 -189126691 - L1MA8 LINE L1 -484 5807 4666 225 0 0 0 chr5 10503459 10503484 -189126666 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5608 182 39 11 chr5 10503484 10504031 -189126119 - L1MA8 LINE L1 -1625 4666 4136 5215 25 0 5 chr5 10504163 10504773 -189125377 - L1PA3 LINE L1 -3 6152 5546 1926 312 49 42 chr5 10504789 10505922 -189124228 - L1M3f LINE L1 -4146 1182 41 251 214 18 0 chr5 10506404 10506460 -189123690 + L1ME LINE L1 5821 5877 -287 268 250 40 55 chr5 10506567 10506683 -189123467 - MLT1J2 LTR MaLR -293 157 80 24 0 0 0 chr5 10507260 10507284 -189122866 + AT_rich Low_complexity Low_complexity 1 24 0 2144 247 93 24 chr5 10507574 10508472 -189121678 - L1ME1 LINE L1 -41 6194 5244 2116 143 20 6 chr5 10508474 10508831 -189121319 + THE1B LTR MaLR 3 364 0 3131 105 47 76 chr5 10508831 10509383 -189120767 + THE1B-int LTR MaLR 1 536 -1044 779 60 0 17 chr5 10509379 10509495 -189120655 + THE1B-int LTR MaLR 1461 1574 -6 * 2198 150 14 3 chr5 10509500 10509860 -189120290 + THE1B LTR MaLR 1 364 0 397 246 126 0 chr5 10509878 10510053 -189120097 - L1ME1 LINE L1 -987 5228 5032 439 266 51 59 chr5 10510095 10510211 -189119939 - L1ME1 LINE L1 -4891 1357 1242 2126 135 3 0 chr5 10510211 10510522 -189119628 - AluSx SINE Alu 0 312 1 439 266 51 59 chr5 10510522 10510959 -189119191 - L1ME1 LINE L1 -5006 1242 791 1627 199 30 41 chr5 10511078 10511519 -189118631 + MER65A LTR ERV1 1 436 -9 2459 89 129 5 chr5 10512570 10512964 -189117186 - LTR7 LTR ERV1 -7 443 1 2390 105 69 10 chr5 10512964 10513355 -189116795 - HERVH LTR ERV1 0 7713 7300 1341 136 28 0 chr5 10513338 10513552 -189116598 - HERVH LTR ERV1 -1894 5819 5600 * 4576 127 1 1 chr5 10513553 10514215 -189115935 - HERVH LTR ERV1 -2564 5149 4488 6330 84 2 2 chr5 10514217 10515071 -189115079 - HERVH LTR ERV1 -3720 3993 3140 * 10941 90 8 27 chr5 10515057 10516666 -189113484 - HERVH LTR ERV1 -4721 2992 1415 37553 39 2 3 chr5 10516666 10521975 -189108175 - L1PA4 LINE L1 -2 6153 850 5505 110 24 17 chr5 10521975 10523455 -189106695 - HERVH LTR ERV1 -6283 1430 1 1709 95 4 16 chr5 10523477 10523742 -189106408 - HERVH LTR ERV1 -6953 760 437 183 42 0 0 chr5 10523981 10524005 -189106145 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1322 92 47 15 chr5 10524742 10524995 -189105155 - HERVH LTR ERV1 -6953 760 437 2395 73 7 0 chr5 10526796 10527099 -189103051 + AluY SINE Alu 1 305 -6 588 280 36 10 chr5 10528185 10528378 -189101772 - MIR SINE MIR 0 262 65 873 299 129 6 chr5 10528565 10528929 -189101221 + MER69 DNA AcHobo 102 510 -2016 599 277 103 29 chr5 10528953 10529408 -189100742 + MER69 DNA AcHobo 2011 2499 -27 1293 178 85 90 chr5 10529524 10529568 -189100582 - MLT1A1 LTR MaLR 0 365 322 1880 131 0 0 chr5 10529568 10529836 -189100314 + AluSc SINE Alu 37 304 -5 1293 178 85 90 chr5 10529836 10530157 -189099993 - MLT1A1 LTR MaLR -43 322 2 300 315 0 0 chr5 10530610 10530718 -189099432 + CT-rich Low_complexity Low_complexity 1 108 0 990 237 38 114 chr5 10531494 10531916 -189098234 - MLT1B LTR MaLR 0 390 1 2001 112 36 10 chr5 10532853 10532886 -189097264 - AluY SINE Alu 0 311 280 297 0 0 0 chr5 10532886 10532919 -189097231 + (TTG)n Simple_repeat Simple_repeat 1 33 0 2001 112 36 10 chr5 10532919 10533188 -189096962 - AluY SINE Alu -31 280 1 2097 118 7 10 chr5 10533253 10533549 -189096601 - AluSq SINE Alu -18 295 1 3080 233 17 27 chr5 10534325 10534510 -189095640 + L1M4 LINE L1 4531 4716 -1430 2342 189 26 35 chr5 10534510 10534969 -189095181 - MSTB2 LTR MaLR 0 457 3 3080 233 17 27 chr5 10534969 10535610 -189094540 + L1M4 LINE L1 4716 5349 -797 2197 103 3 29 chr5 10535698 10536010 -189094140 - AluSp SINE Alu -9 304 1 265 193 34 91 chr5 10536011 10536099 -189094051 - L1PA16 LINE L1 -40 6829 6747 4394 215 43 14 chr5 10536199 10538778 -189091372 - L1PA16 LINE L1 -135 6734 2540 1152 129 31 0 chr5 10538781 10538974 -189091176 + L1PA15-16 LINE L1 1740 1938 -4911 3036 154 54 5 chr5 10538974 10539571 -189090579 - L1PA16 LINE L1 -4266 2583 1958 1428 166 169 13 chr5 10539557 10539864 -189090286 - L1PA11 LINE L1 0 6174 5820 * 429 232 32 0 chr5 10539877 10540032 -189090118 + CT-rich Low_complexity Low_complexity 1 160 0 8870 197 83 16 chr5 10540035 10541779 -189088371 - L1PA16 LINE L1 -4870 1979 119 2355 135 30 16 chr5 10541779 10542149 -189088001 + THE1C LTR MaLR 1 375 0 9640 136 37 15 chr5 10542149 10543689 -189086461 + THE1C-int LTR MaLR 1 1574 -6 2280 141 35 16 chr5 10543694 10544062 -189086088 + THE1C LTR MaLR 1 375 0 864 84 34 0 chr5 10544062 10544181 -189085969 - L1PA16 LINE L1 -6726 123 1 * 3204 224 44 6 chr5 10544175 10544971 -189085179 + L1MB7 LINE L1 5317 6142 -42 189 0 0 0 chr5 10545588 10545609 -189084541 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 301 185 99 12 chr5 10549927 10550008 -189080142 + L1MCa LINE L1 1977 2064 -4362 189 0 0 0 chr5 10551433 10551454 -189078696 + (A)n Simple_repeat Simple_repeat 1 21 0 2090 134 3 3 chr5 10554190 10554496 -189075654 - AluJb SINE Alu -6 306 1 311 193 12 0 chr5 10555617 10555700 -189074450 + GA-rich Low_complexity Low_complexity 4 87 0 2151 113 3 3 chr5 10560248 10560552 -189069598 - AluSp SINE Alu 0 305 2 257 255 10 88 chr5 10563726 10563828 -189066322 + MIR SINE MIR 50 143 -65 312 324 28 34 chr5 10563992 10564171 -189065979 + MER46C DNA MER2_type 159 336 -2 192 279 9 90 chr5 10564173 10564284 -189065866 + MIR SINE MIR 153 254 -8 219 36 0 0 chr5 10564540 10564568 -189065582 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1808 146 3 14 chr5 10564621 10564934 -189065216 - AluSx SINE Alu 0 310 1 656 257 27 16 chr5 10565510 10565697 -189064453 - MER5A DNA MER1_type 0 189 1 24 0 0 0 chr5 10571338 10571362 -189058788 + AT_rich Low_complexity Low_complexity 1 24 0 4864 152 10 12 chr5 10571662 10571908 -189058242 + L1MB1 LINE L1 5361 5606 -562 1897 154 3 0 chr5 10571908 10572207 -189057943 + AluSx SINE Alu 1 300 -12 4864 152 10 12 chr5 10572207 10572770 -189057380 + L1MB1 LINE L1 5606 6168 0 21 71 0 0 chr5 10573621 10573663 -189056487 + AT_rich Low_complexity Low_complexity 1 42 0 279 59 0 0 chr5 10574636 10574684 -189055466 - L1PA2 LINE L1 0 6155 6107 1937 173 0 0 chr5 10575017 10575318 -189054832 - AluSx SINE Alu -11 301 1 210 189 19 19 chr5 10576250 10576303 -189053847 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 282 238 12 36 chr5 10576831 10576915 -189053235 - L2 LINE L2 -32 3281 3200 381 211 96 29 chr5 10577530 10577634 -189052516 - ORSL DNA AcHobo -1 274 164 1490 215 18 0 chr5 10577922 10578229 -189051921 - AluJo SINE Alu 0 312 1 2431 99 3 3 chr5 10579793 10580126 -189050024 + L1PA7 LINE L1 5675 6007 -147 526 146 73 0 chr5 10580126 10580222 -189049928 + AluJb SINE Alu 208 310 -2 193 370 65 7 chr5 10581228 10581366 -189048784 - MIR SINE MIR -116 146 1 225 0 0 0 chr5 10583048 10583073 -189047077 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 1814 280 88 53 chr5 10583154 10584227 -189045923 - HAL1 LINE L1 -1156 1351 241 2520 225 23 8 chr5 10584238 10584758 -189045392 - MER68 LTR ERV1 0 562 35 21 0 0 0 chr5 10585050 10585071 -189045079 + AT_rich Low_complexity Low_complexity 1 21 0 2375 96 0 0 chr5 10585556 10585859 -189044291 + AluSx SINE Alu 1 303 -9 2550 278 49 35 chr5 10587542 10588490 -189041660 + L1ME1 LINE L1 38 772 -4925 4568 242 107 31 chr5 10588507 10590284 -189039866 + L1ME1 LINE L1 3656 5565 -757 1868 245 47 38 chr5 10590676 10591309 -189038841 + L1ME1 LINE L1 5592 6230 -5 2453 89 0 0 chr5 10591392 10591695 -189038455 + AluSc SINE Alu 1 303 -6 1401 184 20 13 chr5 10591701 10592095 -189038055 + L1MA4A LINE L1 5823 6280 -23 369 0 0 0 chr5 10592336 10592377 -189037773 + (TG)n Simple_repeat Simple_repeat 2 42 0 225 0 0 0 chr5 10594055 10594080 -189036070 + (CA)n Simple_repeat Simple_repeat 2 26 0 207 157 20 20 chr5 10594453 10594504 -189035646 + A-rich Low_complexity Low_complexity 2 52 0 2449 95 0 11 chr5 10594626 10594975 -189035175 + L1PA7 LINE L1 2739 3083 -3063 7180 63 10 8 chr5 10594976 10596022 -189034128 + L1PA7 LINE L1 5108 6154 0 1386 258 119 39 chr5 10596333 10596871 -189033279 + MLT1E LTR MaLR 13 593 0 261 219 0 0 chr5 10596875 10596948 -189033202 + (TA)n Simple_repeat Simple_repeat 1 73 0 265 294 50 17 chr5 10598047 10598166 -189031984 + MIR SINE MIR 103 225 -37 387 60 0 0 chr5 10599041 10599091 -189031059 + (TCCA)n Simple_repeat Simple_repeat 3 52 0 2388 136 43 14 chr5 10599826 10600178 -189029972 + THE1B LTR MaLR 1 362 -2 12469 92 14 0 chr5 10600180 10601738 -189028412 + THE1B-int LTR MaLR 1 1579 -1 1324 125 64 53 chr5 10601739 10602023 -189028127 + THE1B LTR MaLR 1 284 -91 296 100 0 0 chr5 10602131 10602171 -189027979 + THE1B LTR MaLR 316 355 0 207 188 0 0 chr5 10603045 10603093 -189027057 + T-rich Low_complexity Low_complexity 2 49 0 2095 98 9 67 chr5 10603527 10603855 -189026295 + AluSc SINE Alu 1 309 0 189 0 0 0 chr5 10604153 10604174 -189025976 + (TA)n Simple_repeat Simple_repeat 2 22 0 206 323 71 55 chr5 10604583 10604710 -189025440 + L2 LINE L2 3123 3251 -21 671 284 15 61 chr5 10605134 10605461 -189024689 - L1M4 LINE L1 -1981 4165 3854 347 294 70 80 chr5 10605587 10605774 -189024376 + MER91A DNA MER1_type 12 196 0 283 326 10 0 chr5 10606162 10606260 -189023890 - L2 LINE L2 -15 3298 3200 2108 112 47 0 chr5 10608945 10609241 -189020909 + AluSg SINE Alu 1 310 0 2167 81 3 14 chr5 10610645 10610929 -189019221 + L1PA7 LINE L1 5873 6153 -1 391 219 202 0 chr5 10611471 10611654 -189018496 - MIR SINE MIR -30 232 13 1451 206 19 3 chr5 10612276 10612583 -189017567 - L1P2 LINE L1 -397 5758 5452 * 1498 213 47 30 chr5 10612577 10612925 -189017225 - L1MA9 LINE L1 -174 6138 5781 369 0 0 0 chr5 10612925 10612966 -189017184 + (TG)n Simple_repeat Simple_repeat 2 42 0 1498 213 47 30 chr5 10612966 10613021 -189017129 - L1MA9 LINE L1 -531 5781 5728 1085 177 18 29 chr5 10613018 10613316 -189016834 + L1M2 LINE L1 5193 5489 -698 * 403 266 31 16 chr5 10613317 10613445 -189016705 + L1MA9 LINE L1 6145 6274 -38 1903 149 22 0 chr5 10614332 10614650 -189015500 + AluSx SINE Alu 1 324 0 344 221 87 29 chr5 10617208 10617312 -189012838 + MER91C DNA MER1_type 24 133 -7 331 315 8 24 chr5 10617723 10617850 -189012300 + MIR SINE MIR 112 236 -26 21 57 0 0 chr5 10618938 10618973 -189011177 + AT_rich Low_complexity Low_complexity 1 35 0 446 350 23 18 chr5 10620484 10620701 -189009449 + MIR SINE MIR 39 256 -6 196 237 219 18 chr5 10621385 10621499 -189008651 - MIR3 SINE MIR -60 148 12 27 29 0 0 chr5 10623091 10623125 -189007025 + AT_rich Low_complexity Low_complexity 1 34 0 2750 13 0 22 chr5 10625396 10625712 -189004438 - AluYa5 SINE Alu -2 309 1 1750 253 104 8 chr5 10629069 10629590 -189000560 + MLT1E LTR MaLR 8 578 -15 434 278 43 16 chr5 10629604 10629791 -189000359 + MLT1E-int LTR MaLR 6 197 -1174 488 181 23 38 chr5 10629824 10629957 -189000193 + L1MA8 LINE L1 6142 6272 -19 3675 180 28 25 chr5 10629977 10630834 -188999316 + L1MB4 LINE L1 5296 6155 -25 713 277 62 10 chr5 10630884 10631173 -188998977 + MLT1E-int LTR MaLR 313 616 -755 404 298 56 120 chr5 10631391 10632110 -188998040 + MLT1E-int LTR MaLR 692 1364 -7 1981 246 78 25 chr5 10632119 10632680 -188997470 + MLT1E LTR MaLR 3 593 0 1836 168 22 11 chr5 10633744 10634101 -188996049 - MER46B DNA MER2_type 0 236 1 26 0 0 0 chr5 10636273 10636299 -188993851 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 10636308 10636330 -188993820 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr5 10636452 10636492 -188993658 + AT_rich Low_complexity Low_complexity 1 40 0 27 73 0 0 chr5 10636704 10636759 -188993391 + AT_rich Low_complexity Low_complexity 1 55 0 28 71 0 0 chr5 10636992 10637048 -188993102 + AT_rich Low_complexity Low_complexity 1 56 0 2155 105 7 0 chr5 10637158 10637452 -188992698 - AluSx SINE Alu -16 296 1 22 0 0 0 chr5 10638486 10638508 -188991642 + AT_rich Low_complexity Low_complexity 1 22 0 2340 69 3 16 chr5 10639348 10639652 -188990498 + AluY SINE Alu 1 300 -11 384 209 0 0 chr5 10639755 10639841 -188990309 + GA-rich Low_complexity Low_complexity 2 87 0 2137 119 3 0 chr5 10640824 10641110 -188989040 - AluSx SINE Alu -25 287 1 1925 115 0 17 chr5 10641677 10641964 -188988186 - L1PA8 LINE L1 0 6172 5891 547 260 91 57 chr5 10642860 10643260 -188986890 - LTR8A LTR ERV1 -19 667 280 317 236 46 50 chr5 10643417 10643589 -188986561 - MER87 LTR ERV1 -395 146 1 1295 156 22 6 chr5 10643620 10644007 -188986143 + LTR47B LTR ERVL 1 443 0 181 390 26 0 chr5 10644123 10644200 -188985950 + MIR3 SINE MIR 109 187 -21 633 255 57 38 chr5 10644593 10644856 -188985294 + MLT1L LTR MaLR 127 394 -221 1089 157 52 9 chr5 10645158 10645368 -188984782 - MER20 DNA MER1_type 0 219 1 516 244 161 0 chr5 10646106 10646311 -188983839 - MIR SINE MIR -12 250 13 322 370 19 19 chr5 10646864 10647026 -188983124 + MIR SINE MIR 69 230 -32 1700 183 59 67 chr5 10647457 10647685 -188982465 - MSTB LTR MaLR -5 421 196 2475 77 0 0 chr5 10647685 10647996 -188982154 + AluY SINE Alu 1 311 0 1700 183 59 67 chr5 10647996 10648188 -188981962 - MSTB LTR MaLR -230 196 4 788 227 146 57 chr5 10648644 10648979 -188981171 + MLT1A1 LTR MaLR 1 365 0 281 298 78 7 chr5 10649340 10649481 -188980669 + MER104 DNA Tc2 29 179 -1 1795 174 3 25 chr5 10650130 10650198 -188979952 - AluJo SINE Alu -3 309 241 1793 155 64 25 chr5 10650198 10650559 -188979591 + THE1C LTR MaLR 1 375 0 1795 174 3 25 chr5 10650559 10650806 -188979344 - AluJo SINE Alu -71 241 1 2595 52 0 3 chr5 10651534 10651839 -188978311 - AluY SINE Alu -7 304 1 311 267 0 0 chr5 10653478 10653553 -188976597 - MIR SINE MIR -110 152 78 258 303 55 85 chr5 10654234 10654399 -188975751 - MIR SINE MIR -26 236 77 219 273 0 0 chr5 10654716 10654771 -188975379 + (TA)n Simple_repeat Simple_repeat 1 55 0 235 319 30 15 chr5 10654843 10654978 -188975172 - L1MC/D LINE L1 -1907 5901 5765 4155 97 24 14 chr5 10655011 10655639 -188974511 - L1PB1 LINE L1 -1 6150 5517 21 0 0 0 chr5 10656594 10656615 -188973535 + AT_rich Low_complexity Low_complexity 1 21 0 371 145 0 0 chr5 10657750 10657819 -188972331 + L1MA7 LINE L1 6193 6261 -30 364 306 79 81 chr5 10658399 10658817 -188971333 - L2 LINE L2 -8 3264 2848 1517 165 68 11 chr5 10659087 10659377 -188970773 + AluSx SINE Alu 1 305 0 206 258 65 0 chr5 10659488 10659550 -188970600 + MIR SINE MIR 124 189 -73 22 0 0 0 chr5 10659859 10659881 -188970269 + AT_rich Low_complexity Low_complexity 1 22 0 201 273 0 0 chr5 10661422 10661477 -188968673 + T-rich Low_complexity Low_complexity 1 55 0 199 305 179 0 chr5 10661707 10661802 -188968348 - MIR SINE MIR -131 131 20 2040 132 13 20 chr5 10662044 10662347 -188967803 - AluSx SINE Alu -11 301 1 210 418 27 0 chr5 10663086 10663196 -188966954 + L2 LINE L2 3143 3255 -17 1867 126 70 0 chr5 10663686 10663972 -188966178 - AluSg SINE Alu -4 306 1 206 118 0 0 chr5 10664111 10664145 -188966005 + (A)n Simple_repeat Simple_repeat 1 34 0 1274 268 89 37 chr5 10664782 10665115 -188965035 + REP3 LTR ERV 27 395 -167 2153 114 0 0 chr5 10665115 10665422 -188964728 - AluSx SINE Alu 0 307 1 1274 268 89 37 chr5 10665422 10665572 -188964578 + REP3 LTR ERV 395 536 -26 584 212 66 7 chr5 10665573 10665710 -188964440 + MER58B DNA MER1_type 192 336 -5 2180 130 3 0 chr5 10665764 10666071 -188964079 + AluSx SINE Alu 1 308 -4 748 200 8 0 chr5 10666415 10666540 -188963610 - FLAM_C SINE Alu -16 127 2 244 272 37 88 chr5 10667390 10667526 -188962624 + MIR SINE MIR 46 174 -88 2176 112 14 3 chr5 10669192 10669487 -188960663 + AluSx SINE Alu 1 298 -14 2174 133 0 0 chr5 10670167 10670468 -188959682 + AluSx SINE Alu 1 301 -11 447 68 0 0 chr5 10670468 10670480 -188959670 + (TG)n Simple_repeat Simple_repeat 1 71 0 447 68 0 0 chr5 10670480 10670539 -188959611 + (TG)n Simple_repeat Simple_repeat 2 60 0 362 314 80 7 chr5 10671200 10671337 -188958813 + MER5B DNA MER1_type 29 175 -3 243 348 70 21 chr5 10674326 10674513 -188955637 + L2 LINE L2 3117 3312 -1 790 147 159 0 chr5 10675313 10675476 -188954674 - MER53 DNA DNA 0 189 1 5574 81 7 19 chr5 10675851 10676605 -188953545 + L1PA8A LINE L1 5387 6131 0 22 0 0 0 chr5 10677039 10677061 -188953089 + AT_rich Low_complexity Low_complexity 1 22 0 886 176 99 43 chr5 10677747 10678049 -188952101 - MER33 DNA MER1_type -1 323 5 265 328 50 17 chr5 10678235 10678354 -188951796 - MIR3 SINE MIR -50 158 36 410 180 22 0 chr5 10678787 10678876 -188951274 + (TATATG)n Simple_repeat Simple_repeat 2 92 0 228 277 116 9 chr5 10679047 10679159 -188950991 - MIR3 SINE MIR -1 207 84 2239 167 24 0 chr5 10679884 10680256 -188949894 + MLT1B LTR MaLR 1 381 -9 439 116 40 36 chr5 10680275 10680579 -188949571 + (TA)n Simple_repeat Simple_repeat 1 305 0 281 218 30 99 chr5 10682432 10682533 -188947617 + L2 LINE L2 3196 3289 -24 248 302 171 24 chr5 10682554 10682759 -188947391 + MIR SINE MIR 28 262 0 207 262 24 60 chr5 10684503 10684587 -188945563 - MER5B DNA MER1_type -71 107 27 1133 162 11 109 chr5 10685290 10685574 -188944576 + L1MA9 LINE L1 6032 6287 -25 1703 195 22 30 chr5 10686720 10687084 -188943066 + MLT1A1 LTR MaLR 5 365 0 180 0 0 0 chr5 10689538 10689558 -188940592 + (T)n Simple_repeat Simple_repeat 1 20 0 2024 177 28 14 chr5 10689621 10689977 -188940173 - MLT1A1 LTR MaLR -4 361 1 1992 244 58 70 chr5 10692187 10692844 -188937306 + MLT1E1 LTR MaLR 6 654 0 1966 125 10 16 chr5 10694573 10694885 -188935265 - AluSg SINE Alu 0 310 1 1562 227 66 37 chr5 10696099 10696553 -188933597 - MLT1C LTR MaLR 0 467 1 216 264 170 50 chr5 10698327 10698486 -188931664 + L2 LINE L2 3077 3254 -59 195 317 59 10 chr5 10698541 10698642 -188931508 + L2 LINE L2 2431 2536 -778 545 226 123 64 chr5 10698652 10698856 -188931294 - MER106A DNA MER1_type 0 236 21 234 328 46 36 chr5 10699045 10699240 -188930910 + L2 LINE L2 2625 2821 -493 569 329 62 26 chr5 10700391 10700813 -188929337 - HAL1b LINE L1 -829 519 83 1585 218 0 0 chr5 10701188 10701486 -188928664 - AluJo SINE Alu -14 298 1 510 149 184 0 chr5 10701846 10701960 -188928190 - L1MB7 LINE L1 -1 6183 6049 953 207 76 11 chr5 10702950 10703225 -188926925 - L1MA4 LINE L1 -3 6297 6005 1747 171 48 25 chr5 10704263 10704619 -188925531 + MLT1A1 LTR MaLR 2 365 0 221 294 109 23 chr5 10705061 10705326 -188924824 + L2 LINE L2 1702 1989 -1325 312 286 40 48 chr5 10705514 10705640 -188924510 + L2 LINE L2 3171 3295 -18 265 282 19 19 chr5 10707361 10707464 -188922686 + GA-rich Low_complexity Low_complexity 2 104 0 204 306 52 60 chr5 10708441 10708575 -188921575 + MIR SINE MIR 80 212 -50 1946 139 0 0 chr5 10709829 10710132 -188920018 + AluSg1 SINE Alu 1 303 0 1576 180 17 20 chr5 10711383 10711683 -188918467 - AluJo SINE Alu -13 299 1 229 374 80 0 chr5 10712124 10712311 -188917839 + MIR SINE MIR 28 229 -33 1124 244 69 41 chr5 10712394 10712758 -188917392 + MLT1A2 LTR MaLR 1 374 0 219 330 117 10 chr5 10712777 10712880 -188917270 + MIR3 SINE MIR 93 206 -2 744 33 0 0 chr5 10713936 10714027 -188916123 + (TG)n Simple_repeat Simple_repeat 2 92 0 446 311 137 5 chr5 10714484 10714696 -188915454 - MIR SINE MIR -13 249 10 216 296 80 0 chr5 10715229 10715317 -188914833 - MIR SINE MIR -117 145 51 447 267 9 26 chr5 10717122 10717238 -188912912 + MER81 DNA DNA 1 114 0 180 77 0 0 chr5 10720436 10720462 -188909688 + (CAA)n Simple_repeat Simple_repeat 2 27 0 607 241 89 11 chr5 10720739 10720950 -188909200 - MIR SINE MIR 0 262 36 2126 154 0 40 chr5 10720957 10721308 -188908842 + MER1B DNA MER1_type 1 337 0 185 175 25 25 chr5 10723140 10723180 -188906970 + MIR SINE MIR 223 262 0 414 0 0 0 chr5 10723343 10723389 -188906761 + (TA)n Simple_repeat Simple_repeat 1 46 0 2270 110 3 0 chr5 10723438 10723739 -188906411 - AluSp SINE Alu -11 302 1 21 0 0 0 chr5 10724019 10724040 -188906110 + AT_rich Low_complexity Low_complexity 1 21 0 629 13 13 0 chr5 10724106 10724184 -188905966 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 229 336 78 9 chr5 10724272 10724388 -188905762 + MIR SINE MIR 67 190 -72 307 304 9 9 chr5 10726110 10726225 -188903925 + MER94 DNA DNA 2 116 -18 182 345 0 0 chr5 10726657 10726715 -188903435 - L3b LINE CR1 -340 1243 1186 214 303 123 58 chr5 10726902 10727057 -188903093 + MIR SINE MIR 20 184 -78 353 354 39 8 chr5 10728984 10729114 -188901036 - L2 LINE L2 -2 3270 3137 1945 196 3 8 chr5 10729134 10729501 -188900649 - MLT1A1 LTR MaLR 0 365 1 533 293 131 38 chr5 10729508 10729836 -188900314 - L2 LINE L2 0 3313 2936 813 275 28 0 chr5 10729836 10730054 -188900096 + MER58A DNA MER1_type 1 224 0 533 293 131 38 chr5 10730054 10730145 -188900005 - L2 LINE L2 -377 2936 2855 960 218 150 35 chr5 10731585 10731952 -188898198 + MLT1C LTR MaLR 1 409 -58 7012 196 20 50 chr5 10731952 10734221 -188895929 - L1PA12 LINE L1 -2795 4789 2604 1471 139 0 8 chr5 10734221 10734473 -188895677 + L1PA14 LINE L1 5910 6159 -2 350 176 14 14 chr5 10734487 10734561 -188895589 + MLT1C LTR MaLR 394 467 0 288 304 0 38 chr5 10735122 10735201 -188894949 - L2 LINE L2 0 3272 3197 288 318 86 20 chr5 10735209 10735360 -188894790 - MIR SINE MIR -13 249 89 2197 162 13 8 chr5 10735655 10736043 -188894107 + MLT1B LTR MaLR 1 390 0 2468 128 5 3 chr5 10736230 10736619 -188893531 + L1PB2 LINE L1 5761 6150 -1 288 98 20 0 chr5 10736658 10736709 -188893441 + L1PB2 LINE L1 6099 6150 -1 288 98 20 0 chr5 10736748 10736799 -188893351 + L1PB2 LINE L1 6099 6150 -1 2633 42 0 0 chr5 10737552 10737859 -188892291 - AluY SINE Alu -4 307 1 897 220 4 60 chr5 10739647 10739879 -188890271 + MER20 DNA MER1_type 1 219 0 180 111 0 0 chr5 10740004 10740031 -188890119 + (TG)n Simple_repeat Simple_repeat 1 27 0 349 309 93 27 chr5 10740268 10740527 -188889623 + MLT1L LTR MaLR 330 605 -10 2145 100 0 42 chr5 10741532 10741843 -188888307 + AluY SINE Alu 3 300 -11 337 304 58 12 chr5 10742174 10742345 -188887805 + MIR SINE MIR 64 242 -20 30 0 0 0 chr5 10742755 10742785 -188887365 + AT_rich Low_complexity Low_complexity 1 30 0 38 0 0 0 chr5 10743232 10743270 -188886880 + AT_rich Low_complexity Low_complexity 1 38 0 2470 70 0 0 chr5 10743811 10744111 -188886039 - AluY SINE Alu -11 300 1 218 313 63 115 chr5 10744305 10744730 -188885420 - L2 LINE L2 -2 3270 2868 306 291 67 67 chr5 10744761 10744971 -188885179 - L2 LINE L2 -542 2772 2563 897 129 7 21 chr5 10745211 10745351 -188884799 - AluJb SINE Alu -174 138 1 1787 161 0 49 chr5 10746237 10746561 -188883589 - AluJb SINE Alu -3 309 2 2063 128 13 13 chr5 10747446 10747752 -188882398 + AluSx SINE Alu 1 306 -6 229 284 11 49 chr5 10748750 10748933 -188881217 + (TATATG)n Simple_repeat Simple_repeat 2 177 0 290 275 12 0 chr5 10751651 10751731 -188878419 + MER20 DNA MER1_type 138 218 -1 239 228 22 43 chr5 10752002 10752094 -188878056 + GA-rich Low_complexity Low_complexity 4 93 0 2332 122 34 0 chr5 10752103 10752455 -188877695 - THE1B LTR MaLR 0 364 1 22 35 0 0 chr5 10753687 10753716 -188876434 + AT_rich Low_complexity Low_complexity 1 29 0 300 232 12 24 chr5 10753918 10754000 -188876150 - L1ME4a LINE L1 -185 5936 5856 33 43 0 0 chr5 10754523 10754570 -188875580 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr5 10757213 10757234 -188872916 + AT_rich Low_complexity Low_complexity 1 21 0 255 247 94 12 chr5 10757536 10757621 -188872529 - L2 LINE L2 -2 3311 3220 1326 156 8 16 chr5 10758779 10759029 -188871121 + L1PB1 LINE L1 5900 6147 -4 1456 226 94 5 chr5 10759344 10759768 -188870382 - MLT1C LTR MaLR 0 467 6 470 268 168 9 chr5 10759865 10760085 -188870065 - MIR SINE MIR 0 262 8 409 323 137 20 chr5 10760433 10760770 -188869380 + L2 LINE L2 2664 3037 -276 430 283 36 7 chr5 10760812 10760950 -188869200 + L2 LINE L2 3171 3312 -1 1116 222 44 4 chr5 10761299 10761547 -188868603 + Tigger7 DNA MER2_type 10 267 -466 527 165 0 10 chr5 10761546 10761643 -188868507 + Tigger7 DNA MER2_type 2390 2485 -2 * 23 33 0 0 chr5 10761789 10761819 -188868331 + AT_rich Low_complexity Low_complexity 1 30 0 1091 233 93 77 chr5 10764737 10765230 -188864920 + MLT1D LTR MaLR 5 505 0 2724 167 39 6 chr5 10765347 10765880 -188864270 + MER34C LTR ERV1 35 585 0 199 310 60 114 chr5 10765943 10766127 -188864023 - L2 LINE L2 -180 3092 2919 1094 261 72 19 chr5 10767189 10767565 -188862585 + MSTD LTR MaLR 1 396 0 440 284 62 40 chr5 10768106 10768282 -188861868 - MIR SINE MIR -67 195 16 229 191 0 0 chr5 10770398 10770440 -188859710 - L2 LINE L2 -4 3309 3268 1184 331 118 28 chr5 10771773 10773013 -188857137 + L2 LINE L2 1954 3313 0 365 278 136 6 chr5 10774829 10774998 -188855152 + MIR SINE MIR 48 238 -24 2022 128 6 25 chr5 10775058 10775377 -188854773 - AluSq SINE Alu 0 313 1 2276 28 0 0 chr5 10775592 10775880 -188854270 - L1HS LINE L1 -3279 2867 2580 20403 20 0 0 chr5 10775880 10779165 -188850985 + L1HS LINE L1 2871 6155 0 31 44 0 0 chr5 10779165 10779210 -188850940 + AT_rich Low_complexity Low_complexity 1 45 0 198 0 0 0 chr5 10779213 10779235 -188850915 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 2103 138 0 53 chr5 10779495 10779851 -188850299 + MER1B DNA MER1_type 1 337 0 221 232 11 63 chr5 10780556 10780651 -188849499 + GA-rich Low_complexity Low_complexity 5 94 0 2000 243 18 6 chr5 10781425 10781936 -188848214 + LTR53 LTR ERVL 3 519 0 247 261 52 70 chr5 10783244 10783359 -188846791 - MIR SINE MIR -118 144 32 318 375 53 33 chr5 10783558 10783918 -188846232 - L3 LINE CR1 -78 1499 1133 325 255 33 85 chr5 10783961 10784173 -188845977 + L1MC5 LINE L1 7725 7925 -36 21 71 0 0 chr5 10784254 10784296 -188845854 + AT_rich Low_complexity Low_complexity 1 42 0 265 324 39 10 chr5 10785687 10785789 -188844361 + MIR SINE MIR 53 157 -105 24 32 0 0 chr5 10785970 10786001 -188844149 + AT_rich Low_complexity Low_complexity 1 31 0 2178 226 59 6 chr5 10786148 10786675 -188843475 + MER68 LTR ERV1 1 555 -7 395 280 10 0 chr5 10787114 10787214 -188842936 + MER58 DNA MER1_type 10 110 -231 1813 151 133 21 chr5 10787253 10787636 -188842514 + MSTA LTR MaLR 1 426 -2 1016 166 10 5 chr5 10787640 10787839 -188842311 + MSTA-int LTR MaLR 3 202 -1378 29606 100 20 57 chr5 10787850 10794228 -188835922 + L1PA7 LINE L1 12 6153 -1 470 231 48 27 chr5 10794229 10794376 -188835774 - LTR49-int LTR ERV1 -3124 3207 3058 7603 150 5 34 chr5 10794387 10795810 -188834340 + MSTA-int LTR MaLR 200 1580 0 1820 147 124 48 chr5 10795810 10796206 -188833944 + MSTA LTR MaLR 1 426 -2 231 297 117 14 chr5 10796610 10796755 -188833395 - MIR3 SINE MIR -23 185 26 327 241 60 0 chr5 10797240 10797323 -188832827 - MIR SINE MIR -50 212 125 829 210 95 5 chr5 10797606 10797806 -188832344 + MER20 DNA MER1_type 1 218 -1 2075 113 39 0 chr5 10798081 10798365 -188831785 - AluSg1 SINE Alu -14 295 1 249 257 135 0 chr5 10799045 10799119 -188831031 + MLT1D LTR MaLR 2 85 -541 936 204 9 18 chr5 10799159 10799384 -188830766 + MLT1D LTR MaLR 283 505 0 1952 236 165 5 chr5 10799388 10799951 -188830199 - MLT1E1 LTR MaLR -1 653 1 385 110 79 18 chr5 10800236 10800400 -188829750 + (TAGA)n Simple_repeat Simple_repeat 4 177 0 909 159 5 15 chr5 10802106 10802301 -188827849 + L1MA4 LINE L1 6101 6293 -7 24 0 0 0 chr5 10802601 10802625 -188827525 + AT_rich Low_complexity Low_complexity 1 24 0 246 105 0 0 chr5 10802960 10802998 -188827152 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 67 0 0 chr5 10803719 10803764 -188826386 + AT_rich Low_complexity Low_complexity 1 45 0 909 262 5 0 chr5 10803861 10804075 -188826075 + MER58A DNA MER1_type 1 215 -9 21 0 0 0 chr5 10804968 10804989 -188825161 + AT_rich Low_complexity Low_complexity 1 21 0 751 274 64 24 chr5 10805321 10805680 -188824470 - Charlie7 DNA MER1_type 0 2612 2149 1820 106 23 0 chr5 10805680 10805936 -188824214 + AluY SINE Alu 39 300 -11 751 274 64 24 chr5 10805936 10806153 -188823997 - Charlie7 DNA MER1_type -463 2149 1942 21 0 0 0 chr5 10806185 10806206 -188823944 + AT_rich Low_complexity Low_complexity 1 21 0 2782 107 46 7 chr5 10806310 10806768 -188823382 - L1PB1 LINE L1 0 6151 5676 284 272 35 18 chr5 10807002 10807116 -188823034 - Charlie7 DNA MER1_type -1010 1602 1487 286 232 30 30 chr5 10807192 10807291 -188822859 - Charlie7 DNA MER1_type -2383 229 131 180 336 109 34 chr5 10807376 10807495 -188822655 + MER5A DNA MER1_type 22 149 -40 371 298 105 11 chr5 10807498 10807777 -188822373 + MLT1H1 LTR MaLR 1 263 -292 344 88 18 0 chr5 10807839 10807896 -188822254 + (GA)n Simple_repeat Simple_repeat 1 58 0 390 196 52 0 chr5 10808059 10808156 -188821994 + MLT1H1 LTR MaLR 454 555 0 465 203 95 42 chr5 10808582 10808740 -188821410 - MIR SINE MIR -61 201 35 1183 162 5 18 chr5 10809021 10809243 -188820907 + MER20 DNA MER1_type 1 219 0 209 213 0 0 chr5 10811046 10811093 -188819057 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 187 318 82 45 chr5 10811403 10811513 -188818637 - MER5A DNA MER1_type -40 149 36 214 116 0 47 chr5 10811778 10811821 -188818329 + (GGA)n Simple_repeat Simple_repeat 2 42 0 304 357 132 0 chr5 10811840 10812067 -188818083 + MIR SINE MIR 5 261 -1 21 0 0 0 chr5 10812562 10812583 -188817567 + AT_rich Low_complexity Low_complexity 1 21 0 441 129 0 0 chr5 10813409 10813479 -188816671 + (CATATA)n Simple_repeat Simple_repeat 4 73 0 864 174 177 119 chr5 10813550 10813795 -188816355 + MLT1A1 LTR MaLR 2 274 -91 1673 190 0 29 chr5 10813795 10814105 -188816045 - AluJb SINE Alu -2 310 10 864 174 177 119 chr5 10814105 10814203 -188815947 + MLT1A1 LTR MaLR 274 365 0 1500 190 62 60 chr5 10814293 10814757 -188815393 + MLT1C LTR MaLR 3 467 0 249 188 0 21 chr5 10815405 10815453 -188814697 - L3 LINE CR1 -5 1572 1526 1709 151 15 4 chr5 10816308 10816580 -188813570 - AluJb SINE Alu -37 275 1 344 219 14 0 chr5 10816612 10816685 -188813465 + MER20 DNA MER1_type 146 219 0 1103 218 100 50 chr5 10816841 10817281 -188812869 + MLT1C LTR MaLR 6 467 0 1568 215 81 39 chr5 10818052 10818535 -188811615 - MLT1D LTR MaLR -2 503 1 222 37 0 0 chr5 10819329 10819356 -188810794 + (CA)n Simple_repeat Simple_repeat 2 28 0 2221 71 0 0 chr5 10819369 10819637 -188810513 - AluY SINE Alu -15 296 29 817 185 6 0 chr5 10819812 10819990 -188810160 + L1MA6 LINE L1 6111 6289 -11 24 32 0 0 chr5 10820081 10820112 -188810038 + AT_rich Low_complexity Low_complexity 1 31 0 249 254 16 25 chr5 10820820 10820942 -188809208 - HAL1 LINE L1 -117 2390 2270 788 290 82 22 chr5 10820956 10821408 -188808742 - HAL1 LINE L1 -273 2234 1756 298 191 186 55 chr5 10821442 10821678 -188808472 - HAL1 LINE L1 -1333 1174 908 294 237 0 0 chr5 10821963 10822039 -188808111 + (TA)n Simple_repeat Simple_repeat 1 76 0 320 294 29 44 chr5 10822087 10822223 -188807927 - HAL1 LINE L1 -2012 495 362 484 294 69 40 chr5 10822273 10822800 -188807350 - L1MDa LINE L1 -4830 1710 1244 390 282 17 0 chr5 10822883 10823000 -188807150 - LTR16A1 LTR ERVL -318 139 21 953 266 83 32 chr5 10824408 10824840 -188805310 + LTR16A1 LTR ERVL 3 456 -1 494 310 33 5 chr5 10824951 10825135 -188805015 + MIR SINE MIR 31 219 -43 255 299 39 0 chr5 10825415 10825492 -188804658 - MIR SINE MIR -77 131 52 411 238 81 31 chr5 10825655 10825815 -188804335 + MLT1J2 LTR MaLR 64 231 -219 217 322 0 0 chr5 10826347 10826406 -188803744 - L2 LINE L2 0 3313 3255 429 171 67 98 chr5 10826407 10826571 -188803579 - MER58B DNA MER1_type -8 333 175 25 31 0 0 chr5 10826799 10826831 -188803319 + AT_rich Low_complexity Low_complexity 1 32 0 28 29 0 0 chr5 10826971 10827006 -188803144 + AT_rich Low_complexity Low_complexity 1 35 0 444 152 30 0 chr5 10827074 10827173 -188802977 + (TA)n Simple_repeat Simple_repeat 2 103 0 864 230 9 28 chr5 10827376 10827593 -188802557 - MER20 DNA MER1_type -1 218 6 2698 70 26 0 chr5 10827633 10828055 -188802095 + L1PA4 LINE L1 5736 6167 0 180 0 0 0 chr5 10828631 10828651 -188801499 + (A)n Simple_repeat Simple_repeat 1 20 0 925 243 11 21 chr5 10830578 10830862 -188799288 + MER33 DNA MER1_type 44 324 0 3524 227 68 49 chr5 10831410 10832725 -188797425 - L1MC4 LINE L1 -2 8040 6702 2150 151 35 14 chr5 10832938 10833061 -188797089 - L1MA8 LINE L1 0 6291 6172 207 0 0 0 chr5 10833061 10833084 -188797066 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2150 151 35 14 chr5 10833084 10833383 -188796767 - L1MA8 LINE L1 -119 6172 5860 1562 183 3 21 chr5 10835203 10835524 -188794626 + AluJb SINE Alu 1 316 0 1565 177 0 28 chr5 10836735 10837018 -188793132 + AluJb SINE Alu 22 296 -16 2091 132 24 32 chr5 10837230 10837608 -188792542 + THE1C LTR MaLR 1 375 0 564 251 84 6 chr5 10837775 10837948 -188792202 + MIR SINE MIR 64 253 -9 240 59 0 0 chr5 10838719 10838753 -188791397 + (CACCAT)n Simple_repeat Simple_repeat 2 35 0 225 310 141 49 chr5 10838876 10839060 -188791090 - MIR3 SINE MIR -5 203 3 198 303 30 0 chr5 10839221 10839287 -188790863 + MIR SINE MIR 54 121 -87 2094 127 43 0 chr5 10839933 10840232 -188789918 - AluSx SINE Alu 0 312 1 2328 70 0 0 chr5 10840346 10840651 -188789499 - AluY SINE Alu 0 305 1 231 242 21 74 chr5 10841252 10841347 -188788803 - MIR SINE MIR -70 192 103 1841 114 4 15 chr5 10842548 10842821 -188787329 - AluSx SINE Alu -27 285 16 1452 168 27 8 chr5 10842821 10843082 -188787068 + AluSx SINE Alu 41 307 -5 22 35 0 0 chr5 10843168 10843197 -188786953 + AT_rich Low_complexity Low_complexity 1 29 0 223 315 44 66 chr5 10844717 10844779 -188785371 - MER5A DNA MER1_type 0 189 127 2088 112 10 27 chr5 10844779 10845075 -188785075 + AluSq SINE Alu 1 291 -22 223 315 44 66 chr5 10845075 10845191 -188784959 - MER5A DNA MER1_type -62 127 1 634 222 119 0 chr5 10845554 10845730 -188784420 - MER58A DNA MER1_type -27 197 1 244 281 31 0 chr5 10845768 10845832 -188784318 + L2 LINE L2 3234 3299 -14 999 174 46 0 chr5 10846044 10846240 -188783910 + MER2 DNA MER2_type 6 210 -135 2229 47 0 0 chr5 10846432 10846690 -188783460 + AluY SINE Alu 40 297 -14 271 0 51 0 chr5 10846704 10846743 -188783407 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 186 227 239 23 chr5 10846805 10846893 -188783257 - MER5A DNA MER1_type -43 146 40 1310 197 29 65 chr5 10847683 10848068 -188782082 + MER93b LTR ERV1 1 371 -2 225 338 104 19 chr5 10850805 10850959 -188779191 - MIR SINE MIR -19 243 77 196 275 0 0 chr5 10850986 10851026 -188779124 - L2 LINE L2 -18 3295 3256 456 155 10 10 chr5 10851066 10851163 -188778987 - MER53 DNA DNA -92 97 1 785 275 42 21 chr5 10853566 10853806 -188776344 + MIR SINE MIR 8 252 -10 26 50 0 0 chr5 10854105 10854145 -188776005 + AT_rich Low_complexity Low_complexity 1 40 0 259 207 0 35 chr5 10855863 10855921 -188774229 + GA-rich Low_complexity Low_complexity 3 58 0 399 73 0 0 chr5 10857461 10857516 -188772634 + (CA)n Simple_repeat Simple_repeat 1 55 0 280 0 50 0 chr5 10857930 10857970 -188772180 + (TA)n Simple_repeat Simple_repeat 1 42 0 180 216 0 0 chr5 10858364 10858415 -188771735 + A-rich Low_complexity Low_complexity 1 51 0 364 278 295 0 chr5 10859022 10859195 -188770955 - MIR SINE MIR -38 224 1 398 237 45 13 chr5 10862053 10862209 -188767941 + (TA)n Simple_repeat Simple_repeat 2 162 0 1051 249 114 79 chr5 10862209 10862967 -188767183 + LTR1B LTR ERV1 1 983 -37 400 257 9 9 chr5 10863016 10863121 -188767029 + LTR28 LTR ERV1 916 1020 0 314 260 21 21 chr5 10863128 10863224 -188766926 + L1MC4 LINE L1 6614 6709 -1333 22 35 0 0 chr5 10863329 10863358 -188766792 + AT_rich Low_complexity Low_complexity 1 29 0 263 284 71 55 chr5 10865617 10865744 -188764406 - L2 LINE L2 -18 3295 3167 321 254 0 0 chr5 10865817 10865888 -188764262 - MER33 DNA MER1_type 0 363 293 1987 134 0 7 chr5 10865901 10866222 -188763928 + AluSx SINE Alu 1 319 0 289 160 266 11 chr5 10866268 10866362 -188763788 - MER33 DNA MER1_type -205 119 2 2400 227 6 52 chr5 10866620 10867249 -188762901 + MER77 LTR ERV1 6 605 0 27 0 0 0 chr5 10868586 10868613 -188761537 + AT_rich Low_complexity Low_complexity 1 27 0 338 108 15 0 chr5 10868614 10868679 -188761471 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 958 170 0 0 chr5 10868696 10868837 -188761313 - AluJo SINE Alu -171 141 1 1058 195 47 9 chr5 10869014 10869229 -188760921 + MER58A DNA MER1_type 2 224 0 1262 69 17 0 chr5 10869323 10869628 -188760522 + (GGAAA)n Simple_repeat Simple_repeat 1 310 0 413 315 170 16 chr5 10870790 10871251 -188758899 - L2 LINE L2 -28 3285 2752 441 161 136 0 chr5 10871252 10871382 -188758768 - MER58B DNA MER1_type -4 337 181 432 338 118 12 chr5 10871576 10871975 -188758175 - L2 LINE L2 -722 2592 2152 226 324 103 80 chr5 10874545 10874857 -188755293 + L2 LINE L2 2954 3272 0 313 333 54 42 chr5 10875364 10875568 -188754582 + MIR SINE MIR 8 214 -48 2228 97 3 0 chr5 10877218 10877516 -188752634 + AluSq SINE Alu 1 299 -14 1500 194 89 23 chr5 10881423 10881814 -188748336 + MER96B DNA MER1_type 1 417 0 287 293 99 5 chr5 10882045 10882257 -188747893 + MLT1L LTR MaLR 367 598 -17 2396 77 0 0 chr5 10882590 10882888 -188747262 - AluY SINE Alu -13 298 1 260 373 40 17 chr5 10883002 10883179 -188746971 - MIR3 SINE MIR -7 201 21 715 202 50 15 chr5 10883306 10883504 -188746646 - MER3 DNA MER1_type -4 205 1 2132 177 57 7 chr5 10883899 10884305 -188745845 + MSTB LTR MaLR 1 426 0 2101 243 40 29 chr5 10884600 10885325 -188744825 - L1ME1 LINE L1 -4 6162 5430 227 154 218 26 chr5 10885330 10885408 -188744742 - L1ME1 LINE L1 -828 5346 5254 1270 242 49 20 chr5 10885459 10885951 -188744199 - L1ME1 LINE L1 -898 5248 4743 604 305 40 22 chr5 10886074 10886300 -188743850 + L2 LINE L2 3076 3305 -8 25 51 0 0 chr5 10887393 10887432 -188742718 + AT_rich Low_complexity Low_complexity 1 39 0 315 0 0 0 chr5 10890823 10890858 -188739292 + (TG)n Simple_repeat Simple_repeat 1 35 0 1630 233 29 16 chr5 10891402 10891848 -188738302 + MLT1C LTR MaLR 16 467 0 229 186 0 0 chr5 10891909 10891952 -188738198 + MER81 DNA DNA 71 113 -1 187 341 110 0 chr5 10892814 10892896 -188737254 + L2 LINE L2 3173 3263 -9 1051 314 26 30 chr5 10892899 10893466 -188736684 + L1MC4a LINE L1 5398 5962 -1846 338 325 118 19 chr5 10893818 10894030 -188736120 + L1MC4a LINE L1 6414 6646 -1162 1511 232 55 110 chr5 10894058 10895274 -188734876 + L1MC5 LINE L1 6749 7897 -64 197 379 97 0 chr5 10895416 10895519 -188734631 + L2 LINE L2 3160 3272 0 917 260 22 30 chr5 10897552 10898015 -188732135 + MLT1H1 LTR MaLR 4 521 -34 468 0 0 0 chr5 10898143 10898195 -188731955 + (TG)n Simple_repeat Simple_repeat 1 52 0 1703 199 0 13 chr5 10898226 10898533 -188731617 + AluJo SINE Alu 1 303 -9 570 187 187 28 chr5 10900556 10900738 -188729412 - MER20 DNA MER1_type -8 211 1 1378 22 0 22 chr5 10900741 10900925 -188729225 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 180 0 0 0 chr5 10900925 10900945 -188729205 + (CAGA)n Simple_repeat Simple_repeat 1 20 0 200 211 0 0 chr5 10900945 10900983 -188729167 + (CATA)n Simple_repeat Simple_repeat 3 40 0 2364 98 0 16 chr5 10901995 10902302 -188727848 - AluSg SINE Alu -8 302 1 202 279 58 58 chr5 10903154 10903258 -188726892 - MIR3 SINE MIR 0 208 105 207 100 0 0 chr5 10904669 10904699 -188725451 + (A)n Simple_repeat Simple_repeat 1 30 0 2483 80 0 0 chr5 10904820 10905131 -188725019 + AluY SINE Alu 1 311 0 216 286 26 26 chr5 10907091 10907168 -188722982 - MIR SINE MIR -79 183 107 614 315 136 33 chr5 10907535 10908173 -188721977 + L2 LINE L2 2181 2884 -430 286 322 103 21 chr5 10908215 10908457 -188721693 + L2 LINE L2 2888 3149 -164 243 159 0 0 chr5 10908562 10908606 -188721544 + L1MA9 LINE L1 6230 6273 -39 294 284 77 0 chr5 10908639 10908794 -188721356 - HERVL74 LTR ERVL -3751 1934 1768 240 244 98 12 chr5 10908866 10908948 -188721202 + L2 LINE L2 3189 3277 -36 444 254 273 5 chr5 10909644 10909849 -188720301 + MIR SINE MIR 2 261 -1 359 241 68 2 chr5 10909995 10910203 -188719947 + L1ME3A LINE L1 5647 5885 -285 191 309 73 109 chr5 10910437 10910767 -188719383 + L2 LINE L2 2950 3267 -5 28 29 0 0 chr5 10911229 10911264 -188718886 + AT_rich Low_complexity Low_complexity 1 35 0 288 0 0 0 chr5 10912453 10912485 -188717665 + (CA)n Simple_repeat Simple_repeat 1 32 0 1270 257 54 28 chr5 10912589 10913123 -188717027 + MER74B LTR ERVL 69 616 -6 232 281 0 0 chr5 10913380 10913505 -188716645 + (CA)n Simple_repeat Simple_repeat 1 125 0 647 206 217 0 chr5 10913539 10913714 -188716436 + MIR SINE MIR 45 257 -5 2560 175 24 42 chr5 10915276 10915853 -188714297 + L1MB7 LINE L1 5618 6184 0 2954 72 0 5 chr5 10916154 10916543 -188713607 + L1PA8 LINE L1 5784 6170 -2 28 29 0 0 chr5 10916561 10916596 -188713554 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 10916799 10916830 -188713320 + AT_rich Low_complexity Low_complexity 1 31 0 216 316 61 10 chr5 10918320 10918418 -188711732 + MIR SINE MIR 32 134 -128 340 333 23 0 chr5 10919413 10919542 -188710608 + MIR SINE MIR 39 170 -92 2118 120 3 0 chr5 10919913 10920229 -188709921 - AluSx SINE Alu 0 317 1 267 357 25 19 chr5 10921563 10921720 -188708430 + MIR SINE MIR 90 247 -15 559 234 3 6 chr5 10922799 10923154 -188706996 + (CCA)n Simple_repeat Simple_repeat 1 353 0 648 263 122 10 chr5 10923511 10923716 -188706434 - MIR SINE MIR -22 240 13 357 280 19 28 chr5 10923945 10924052 -188706098 - MIR SINE MIR -67 141 36 1990 128 22 10 chr5 10925472 10925784 -188704366 + L1PA8A LINE L1 5816 6131 0 21 0 0 0 chr5 10925916 10925937 -188704213 + AT_rich Low_complexity Low_complexity 1 21 0 2643 20 13 10 chr5 10926595 10926900 -188703250 + AluYa5 SINE Alu 1 306 -5 2056 167 5 32 chr5 10927467 10927838 -188702312 - MER46B DNA MER2_type 0 236 1 489 286 119 5 chr5 10929684 10929880 -188700270 + MIR SINE MIR 37 251 -11 22 0 0 0 chr5 10930873 10930895 -188699255 + AT_rich Low_complexity Low_complexity 1 22 0 937 200 56 37 chr5 10931636 10931851 -188698299 + MER20 DNA MER1_type 1 219 0 1562 201 19 46 chr5 10932695 10932907 -188697243 - MLT1A1 LTR MaLR -6 359 160 2517 57 0 3 chr5 10932907 10933207 -188696943 - AluY SINE Alu -12 299 1 1562 201 19 46 chr5 10933207 10933363 -188696787 - MLT1A1 LTR MaLR -205 160 1 1638 262 16 26 chr5 10933799 10934306 -188695844 - L1 LINE L1 -3004 3142 2641 203 278 0 0 chr5 10935303 10935357 -188694793 - MIR SINE MIR -124 138 85 2094 128 0 13 chr5 10935663 10935968 -188694182 + AluSg SINE Alu 2 302 -8 515 316 76 24 chr5 10936447 10936965 -188693185 - L1ME LINE L1 -502 5664 5116 935 305 63 50 chr5 10939417 10940080 -188690070 + L2 LINE L2 2210 2881 -433 357 254 53 95 chr5 10940118 10940307 -188689843 + L2 LINE L2 3108 3288 -25 443 237 142 24 chr5 10940820 10940989 -188689161 + MIR SINE MIR 63 251 -11 2162 62 44 0 chr5 10941085 10941419 -188688731 + AluY SINE Alu 1 346 0 1956 136 4 0 chr5 10941970 10942249 -188687901 + AluSg SINE Alu 1 280 -30 308 164 15 0 chr5 10942981 10943048 -188687102 + (TA)n Simple_repeat Simple_repeat 1 68 0 423 56 0 0 chr5 10943052 10943106 -188687044 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 24 32 0 0 chr5 10943647 10943678 -188686472 + AT_rich Low_complexity Low_complexity 1 31 0 264 288 81 119 chr5 10943794 10944079 -188686071 - L2 LINE L2 -1 3271 2998 2743 283 73 44 chr5 10944268 10945977 -188684173 - L2 LINE L2 -3 3310 1559 214 206 29 0 chr5 10948485 10948553 -188681597 + CT-rich Low_complexity Low_complexity 1 70 0 26 30 0 0 chr5 10948616 10948649 -188681501 + AT_rich Low_complexity Low_complexity 1 33 0 338 285 173 17 chr5 10949025 10949320 -188680830 + L1ME4a LINE L1 5728 6068 -53 27 29 0 0 chr5 10949345 10949379 -188680771 + AT_rich Low_complexity Low_complexity 1 34 0 942 214 68 10 chr5 10950579 10950785 -188679365 + MER58A DNA MER1_type 7 224 0 589 249 62 8 chr5 10950943 10951130 -188679020 + MIR SINE MIR 42 243 -19 2254 118 16 0 chr5 10952266 10952572 -188677578 - AluSx SINE Alu -1 311 1 1697 238 118 19 chr5 10957011 10957494 -188672656 + MER77 LTR ERV1 54 584 -21 204 234 47 16 chr5 10958248 10958312 -188671838 + GA-rich Low_complexity Low_complexity 1 66 0 483 267 45 11 chr5 10958431 10958607 -188671543 - L1MA9 LINE L1 -30 6282 6101 26 30 0 0 chr5 10959074 10959107 -188671043 + AT_rich Low_complexity Low_complexity 1 33 0 3645 116 0 15 chr5 10959107 10959633 -188670517 - L1PB1 LINE L1 0 6151 5634 2481 62 0 0 chr5 10960309 10960600 -188669550 + AluY SINE Alu 1 291 -20 25 75 0 0 chr5 10961682 10961735 -188668415 + AT_rich Low_complexity Low_complexity 1 53 0 181 242 0 0 chr5 10963317 10963350 -188666800 + MIR SINE MIR 206 238 -24 262 221 23 107 chr5 10963510 10963641 -188666509 - L3 LINE CR1 -689 888 769 4838 97 14 0 chr5 10963885 10964514 -188665636 + L1PA11 LINE L1 5537 6174 0 3344 203 23 5 chr5 10968081 10968701 -188661449 - MER82 DNA MER2_type 0 653 23 236 65 43 0 chr5 10970150 10970196 -188659954 + T-rich Low_complexity Low_complexity 2 180 0 2192 95 0 3 chr5 10970196 10970480 -188659670 - AluY SINE Alu -1 328 1 202 306 35 12 chr5 10972506 10972591 -188657559 + MIR3 SINE MIR 103 189 -19 2631 46 0 0 chr5 10972825 10973131 -188657019 - AluY SINE Alu -5 306 1 1751 233 99 42 chr5 10974121 10974674 -188655476 + MLT1E LTR MaLR 7 591 -2 25 0 0 0 chr5 10974712 10974737 -188655413 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 10974768 10974798 -188655352 + AT_rich Low_complexity Low_complexity 1 30 0 24 85 0 0 chr5 10975377 10975436 -188654714 + AT_rich Low_complexity Low_complexity 1 59 0 5580 114 10 2 chr5 10977094 10977919 -188652231 + L1PA13 LINE L1 5333 6163 0 1119 203 14 27 chr5 10978910 10979132 -188651018 - MER20 DNA MER1_type 0 219 1 23 33 0 0 chr5 10979428 10979458 -188650692 + AT_rich Low_complexity Low_complexity 1 30 0 301 284 97 30 chr5 10979999 10980133 -188650017 + MER5A DNA MER1_type 18 160 -29 282 228 81 87 chr5 10980014 10980163 -188649987 - MER5A DNA MER1_type -24 165 18 * 1087 224 72 36 chr5 10980355 10980686 -188649464 - MER2 DNA MER2_type 0 344 2 1575 39 0 0 chr5 10981125 10981303 -188648847 + L1PA4 LINE L1 5975 6152 -3 2242 105 0 3 chr5 10982041 10982336 -188647814 - AluSg SINE Alu -16 294 1 272 158 129 109 chr5 10982866 10982967 -188647183 - MIR SINE MIR -76 186 84 2209 96 0 0 chr5 10983921 10984231 -188645919 - AluSg SINE Alu 0 310 1 295 304 36 9 chr5 10984440 10984552 -188645598 - MIR SINE MIR -114 148 34 225 294 209 35 chr5 10984795 10984996 -188645154 + MIR SINE MIR 15 250 -12 796 320 33 27 chr5 10985494 10985831 -188644319 + MLT1I LTR MaLR 71 409 0 1042 17 0 0 chr5 10986926 10987042 -188643108 - L1PA4 LINE L1 -6 6149 6034 292 293 97 27 chr5 10987651 10987951 -188642199 - L1ME4a LINE L1 -58 6063 5743 266 91 0 0 chr5 10988002 10988046 -188642104 + L1PA3 LINE L1 6112 6155 0 22 0 0 0 chr5 10988046 10988068 -188642082 + AT_rich Low_complexity Low_complexity 1 22 0 186 189 0 0 chr5 10988513 10988550 -188641600 + GA-rich Low_complexity Low_complexity 3 39 0 1906 125 45 3 chr5 10989866 10990154 -188639996 - AluSx SINE Alu -9 303 4 248 356 20 0 chr5 10990636 10990737 -188639413 + L2 LINE L2 3153 3255 -17 386 174 130 11 chr5 10991289 10991381 -188638769 - L1MC/D LINE L1 -2331 5477 5375 755 185 0 55 chr5 10991726 10991872 -188638278 + AluJo SINE Alu 11 148 -164 1224 208 94 29 chr5 10991873 10992215 -188637935 + THE1C LTR MaLR 3 366 -9 9526 135 40 44 chr5 10992234 10993816 -188636334 + THE1C-int LTR MaLR 3 1579 -1 1714 143 105 46 chr5 10993816 10994167 -188635983 + THE1C LTR MaLR 1 372 -3 873 192 12 35 chr5 10994170 10994342 -188635808 + AluJo SINE Alu 143 310 -2 210 211 307 26 chr5 10994441 10994555 -188635595 + MIR SINE MIR 117 262 0 860 224 29 24 chr5 10994946 10995156 -188634994 - MER20 DNA MER1_type -8 211 1 2233 118 3 10 chr5 10995860 10996173 -188633977 - AluSx SINE Alu -1 311 1 770 263 52 0 chr5 10997483 10997677 -188632473 + MER63A DNA MER1_type 1 204 -6 243 314 11 38 chr5 10998057 10998242 -188631908 + CT-rich Low_complexity Low_complexity 1 180 0 554 178 9 146 chr5 10999849 11000068 -188630082 + MER53 DNA DNA 1 189 0 523 319 103 67 chr5 11000718 11000939 -188629211 + HAL1 LINE L1 885 1097 -1410 3038 115 2 9 chr5 11000939 11001402 -188628748 + L1PA8 LINE L1 5732 6191 0 523 319 103 67 chr5 11001402 11002012 -188628138 + HAL1 LINE L1 1097 1747 -760 704 241 32 27 chr5 11002158 11002378 -188627772 - MIR SINE MIR -11 251 31 24 0 0 0 chr5 11005377 11005401 -188624749 + AT_rich Low_complexity Low_complexity 1 24 0 1559 115 17 0 chr5 11006128 11006362 -188623788 + L1MC1 LINE L1 5947 6184 -149 349 310 76 38 chr5 11006970 11007154 -188622996 - L2 LINE L2 0 3313 3123 274 309 21 0 chr5 11007215 11007312 -188622838 - MIR SINE MIR -108 154 56 3371 152 9 0 chr5 11007589 11008122 -188622028 + L1MC1 LINE L1 5788 6325 -8 378 238 24 0 chr5 11008129 11008255 -188621895 + (TA)n Simple_repeat Simple_repeat 1 129 0 27 29 0 0 chr5 11008394 11008428 -188621722 + AT_rich Low_complexity Low_complexity 1 34 0 31 0 0 0 chr5 11008930 11008961 -188621189 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 11009090 11009111 -188621039 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 11009904 11009925 -188620225 + AT_rich Low_complexity Low_complexity 1 21 0 305 243 87 0 chr5 11010420 11010523 -188619627 - L2 LINE L2 -6 3307 3196 426 231 110 99 chr5 11010774 11010956 -188619194 + L2 LINE L2 3108 3291 -22 2095 118 3 7 chr5 11010985 11011272 -188618878 - AluSx SINE Alu -26 286 1 672 222 60 0 chr5 11012510 11012677 -188617473 - MIR SINE MIR -22 240 64 660 247 60 47 chr5 11012966 11013201 -188616949 + MER74A LTR ERVL 11 248 -310 183 275 43 29 chr5 11014411 11014480 -188615670 + L2 LINE L2 3160 3229 -84 521 209 0 0 chr5 11015538 11015648 -188614502 - MER53 DNA DNA -9 180 71 204 211 0 0 chr5 11016299 11016337 -188613813 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr5 11017029 11017052 -188613098 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 11018542 11018563 -188611587 + AT_rich Low_complexity Low_complexity 1 21 0 2409 85 7 0 chr5 11018861 11019166 -188610984 + AluSg SINE Alu 1 307 -3 244 379 107 22 chr5 11019301 11019665 -188610485 - L2 LINE L2 0 3313 2919 21 0 0 0 chr5 11020266 11020287 -188609863 + AT_rich Low_complexity Low_complexity 1 21 0 2540 71 0 0 chr5 11022650 11022960 -188607190 + AluY SINE Alu 1 310 -1 227 287 77 107 chr5 11023499 11023799 -188606351 + L2 LINE L2 2933 3223 -49 2341 84 0 0 chr5 11024189 11024504 -188605646 - AluSq SINE Alu 0 315 1 459 308 137 12 chr5 11024719 11025047 -188605103 - L2 LINE L2 0 3313 2945 209 387 0 0 chr5 11025155 11025230 -188604920 - L2 LINE L2 0 3313 3239 229 224 45 15 chr5 11025266 11025333 -188604817 + MER116 DNA Mariner 6 74 -6 981 143 65 32 chr5 11026551 11026767 -188603383 + L1MA8 LINE L1 6068 6290 -1 266 359 36 36 chr5 11027249 11027444 -188602706 - MIR SINE MIR -48 214 20 252 0 0 0 chr5 11027984 11028012 -188602138 + (TA)n Simple_repeat Simple_repeat 2 29 0 2081 193 19 61 chr5 11028806 11029329 -188600821 - MLT1D LTR MaLR -4 501 1 2090 161 24 0 chr5 11029370 11029706 -188600444 + MER2 DNA MER2_type 1 344 0 1767 197 33 0 chr5 11029964 11030294 -188599856 - MER47B DNA MER2_type -76 342 2 261 235 286 25 chr5 11030992 11031111 -188599039 - L2 LINE L2 0 3272 3123 260 172 46 0 chr5 11031146 11031233 -188598917 + (CA)n Simple_repeat Simple_repeat 1 91 0 603 204 65 117 chr5 11032731 11032962 -188597188 + MER20 DNA MER1_type 1 219 0 267 357 25 19 chr5 11034209 11034366 -188595784 - MIR SINE MIR -15 247 90 2013 121 7 7 chr5 11035696 11035985 -188594165 + AluSx SINE Alu 1 289 -23 340 333 23 0 chr5 11036388 11036517 -188593633 - MIR SINE MIR -92 170 39 206 316 61 10 chr5 11037451 11037549 -188592601 - MIR SINE MIR -128 134 32 24 32 0 0 chr5 11039039 11039070 -188591080 + AT_rich Low_complexity Low_complexity 1 31 0 2041 79 4 8 chr5 11039166 11039433 -188590717 + AluYa5 SINE Alu 38 303 -8 515 316 76 24 chr5 11039912 11040430 -188589720 - L1ME LINE L1 -502 5664 5116 935 305 63 50 chr5 11042881 11043544 -188586606 + L2 LINE L2 2210 2881 -433 357 254 53 95 chr5 11043582 11043771 -188586379 + L2 LINE L2 3108 3288 -25 443 237 142 24 chr5 11044284 11044453 -188585697 + MIR SINE MIR 63 251 -11 2162 62 44 0 chr5 11044549 11044883 -188585267 + AluY SINE Alu 1 346 0 1956 136 4 0 chr5 11045435 11045714 -188584436 + AluSg SINE Alu 1 280 -30 299 167 15 0 chr5 11046446 11046512 -188583638 + (TA)n Simple_repeat Simple_repeat 2 68 0 423 56 0 0 chr5 11046517 11046571 -188583579 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 24 32 0 0 chr5 11047113 11047144 -188583006 + AT_rich Low_complexity Low_complexity 1 31 0 264 288 81 119 chr5 11047260 11047545 -188582605 - L2 LINE L2 -1 3271 2998 2223 283 64 35 chr5 11047734 11049105 -188581045 - L2 LINE L2 -3 3310 1907 470 215 54 0 chr5 11049906 11049999 -188580151 + MER5A DNA MER1_type 7 104 -85 21 0 0 0 chr5 11050130 11050151 -188579999 + AT_rich Low_complexity Low_complexity 1 21 0 365 303 76 0 chr5 11052726 11052871 -188577279 - L2 LINE L2 -2 3311 3156 2215 226 29 6 chr5 11053138 11053659 -188576491 + L1MC3 LINE L1 7234 7766 -19 2225 123 0 0 chr5 11053666 11053975 -188576175 + AluSx SINE Alu 1 309 -3 2117 112 20 3 chr5 11054842 11055138 -188575012 + AluSq SINE Alu 5 305 -8 1364 225 61 48 chr5 11056376 11056490 -188573660 + MLT1C LTR MaLR 4 115 -352 1958 145 148 19 chr5 11056490 11056869 -188573281 + MSTA LTR MaLR 1 428 0 1364 225 61 48 chr5 11056869 11057212 -188572938 + MLT1C LTR MaLR 115 467 0 429 145 0 0 chr5 11057560 11057629 -188572521 + MER116 DNA Mariner 6 74 -6 1071 246 18 0 chr5 11057632 11057852 -188572298 + MER58A DNA MER1_type 1 224 0 314 128 21 0 chr5 11058134 11058181 -188571969 + MLT1C LTR MaLR 343 390 -77 241 281 91 18 chr5 11059524 11059860 -188570290 - LTR33 LTR ERVL -9 512 83 698 256 81 20 chr5 11060206 11060452 -188569698 - MIR SINE MIR 0 262 2 385 268 75 10 chr5 11060957 11061167 -188568983 + MLT1H1 LTR MaLR 2 181 -374 418 271 133 18 chr5 11061204 11061370 -188568780 + MLT1H1 LTR MaLR 371 555 0 22 35 0 0 chr5 11062076 11062105 -188568045 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr5 11063027 11063064 -188567086 + AT_rich Low_complexity Low_complexity 1 37 0 207 185 0 108 chr5 11063345 11063410 -188566740 + MER5B DNA MER1_type 12 69 -109 205 400 9 0 chr5 11064265 11064375 -188565775 + L2 LINE L2 3145 3255 -17 188 402 51 8 chr5 11064486 11064603 -188565547 + L3b LINE CR1 1455 1576 -7 2224 85 0 69 chr5 11064835 11065153 -188564997 - AluSx SINE Alu -16 296 1 995 82 48 0 chr5 11067142 11067288 -188562862 - MER41A LTR ERV1 0 554 402 2301 116 0 0 chr5 11068895 11069197 -188560953 + AluSx SINE Alu 1 302 -10 1833 202 26 19 chr5 11071506 11071927 -188558223 - L1MB8 LINE L1 -1 6177 5754 656 122 2 2 chr5 11072162 11072269 -188557881 - Tigger4(Zombi) DNA MER2_type 0 2731 2625 475 204 0 0 chr5 11072258 11072346 -188557804 - Tigger4(Zombi) DNA MER2_type -2643 88 1 * 351 233 38 60 chr5 11072688 11072821 -188557329 - L2 LINE L2 0 3313 3184 2204 95 3 29 chr5 11072873 11073188 -188556962 + AluY SINE Alu 1 307 -4 180 0 0 0 chr5 11073415 11073435 -188556715 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 336 285 86 106 chr5 11077737 11078084 -188552066 + L1M2 LINE L1 897 1235 -5614 216 0 0 0 chr5 11078084 11078108 -188552042 + (CGCGG)n Simple_repeat Simple_repeat 1 24 0 336 285 86 106 chr5 11078108 11078202 -188551948 + L1M2 LINE L1 1235 1329 -5520 180 0 0 0 chr5 11078883 11078903 -188551247 + (TCC)n Simple_repeat Simple_repeat 1 20 0 198 320 0 0 chr5 11081090 11081140 -188549010 + MIR SINE MIR 87 136 -72 611 275 58 116 chr5 11083819 11084006 -188546144 + MLT1J LTR MaLR 119 270 -241 2202 123 0 0 chr5 11084006 11084307 -188545843 + AluSx SINE Alu 1 301 -11 611 275 58 116 chr5 11084307 11084533 -188545617 + MLT1J LTR MaLR 270 508 -3 288 368 56 52 chr5 11084675 11084944 -188545206 - L2 LINE L2 -35 3237 2968 1651 165 18 107 chr5 11085070 11085471 -188544679 - MLT1A1 LTR MaLR 0 365 1 8304 198 57 31 chr5 11085471 11087163 -188542987 - MLT1A1-int LTR MaLR 0 1735 1 714 203 8 8 chr5 11087163 11087296 -188542854 - MLT1A1 LTR MaLR 0 365 233 394 266 90 34 chr5 11087377 11087610 -188542540 + L1ME LINE L1 3816 4061 -2085 386 289 100 54 chr5 11087845 11088946 -188541204 + L1ME LINE L1 4442 5617 -547 841 368 124 7 chr5 11089289 11090104 -188540046 - L2 LINE L2 -1481 1833 924 356 296 29 52 chr5 11090518 11090690 -188539460 + MER5B DNA MER1_type 22 178 0 668 310 21 8 chr5 11091626 11091868 -188538282 - MIR SINE MIR -3 259 15 554 157 90 2 chr5 11091893 11092065 -188538085 - MER58A DNA MER1_type -3 221 1 882 214 27 16 chr5 11092073 11092260 -188537890 - MER5A DNA MER1_type 0 189 1 25 0 0 0 chr5 11093096 11093121 -188537029 + AT_rich Low_complexity Low_complexity 1 25 0 497 278 32 27 chr5 11093411 11093598 -188536552 - MIR3 SINE MIR -13 195 8 396 0 0 0 chr5 11093667 11093711 -188536439 + (TG)n Simple_repeat Simple_repeat 2 45 0 624 62 0 0 chr5 11093719 11093800 -188536350 + (GGAGAA)n Simple_repeat Simple_repeat 1 81 0 509 279 191 38 chr5 11093811 11094151 -188535999 - MLT1J LTR MaLR -113 398 7 2007 129 57 48 chr5 11094559 11094931 -188535219 - THE1C LTR MaLR 0 375 1 293 308 97 44 chr5 11095925 11096152 -188533998 - MLT1J LTR MaLR -130 381 143 391 283 167 24 chr5 11096603 11096896 -188533254 - L1MEd LINE L1 -5150 969 635 475 231 106 60 chr5 11097153 11097435 -188532715 - L1MEd LINE L1 -5794 325 31 1388 189 79 4 chr5 11097962 11098227 -188531923 - AluJb SINE Alu -19 293 9 3112 74 13 2 chr5 11098702 11099095 -188531055 + L1PA13 LINE L1 5767 6163 0 453 293 135 83 chr5 11099097 11099352 -188530798 + L1ME4a LINE L1 5310 5551 -570 2366 61 0 0 chr5 11099352 11099677 -188530473 + AluY SINE Alu 1 325 0 453 293 135 83 chr5 11099677 11100007 -188530143 + L1ME4a LINE L1 5551 5926 -195 1521 174 30 0 chr5 11100047 11100312 -188529838 + MER2 DNA MER2_type 1 273 -72 198 333 20 0 chr5 11100507 11100558 -188529592 - MER5A DNA MER1_type -65 124 73 23 0 0 0 chr5 11101280 11101303 -188528847 + AT_rich Low_complexity Low_complexity 1 23 0 797 295 172 12 chr5 11101619 11102043 -188528107 - L2 LINE L2 -1012 2302 1811 25 0 0 0 chr5 11102047 11102072 -188528078 + AT_rich Low_complexity Low_complexity 1 25 0 407 221 110 8 chr5 11102107 11102234 -188527916 - Zaphod DNA AcHobo -10 4021 3882 509 212 0 0 chr5 11102237 11102336 -188527814 + L1MD2 LINE L1 6240 6338 -21 267 247 27 27 chr5 11102383 11102456 -188527694 - MER115 DNA AcHobo -144 549 477 717 255 13 0 chr5 11102464 11102621 -188527529 - MER45A DNA AcHobo -1 177 19 444 195 234 8 chr5 11102645 11102773 -188527377 - LTR52 LTR ERVL -264 157 1 562 279 113 26 chr5 11102781 11103046 -188527104 + L2 LINE L2 3005 3292 -21 424 224 129 99 chr5 11105014 11105092 -188525058 + MLT1I LTR MaLR 107 181 -228 1334 167 139 0 chr5 11105092 11105350 -188524800 + AluJb SINE Alu 1 294 -18 424 224 129 99 chr5 11105350 11105543 -188524607 + MLT1I LTR MaLR 181 386 -23 1741 184 10 0 chr5 11105686 11105985 -188524165 + AluJo SINE Alu 1 302 -10 21 71 0 0 chr5 11107024 11107066 -188523084 + AT_rich Low_complexity Low_complexity 1 42 0 635 290 43 90 chr5 11107135 11107631 -188522519 - MLT1J2 LTR MaLR -8 442 1 198 250 21 0 chr5 11108020 11108068 -188522082 - L2 LINE L2 0 3313 3265 1789 203 109 106 chr5 11108543 11109348 -188520802 + Charlie2 DNA MER1_type 1874 2684 -178 8080 29 5 0 chr5 11109348 11110497 -188519653 + L1PA4 LINE L1 5000 6152 -3 1789 203 109 106 chr5 11110497 11110644 -188519506 + Charlie2 DNA MER1_type 2684 2829 -33 244 203 0 127 chr5 11110784 11110832 -188519318 - MER46C DNA MER2_type -66 272 236 1253 247 108 44 chr5 11110832 11111350 -188518800 + MLT1H1 LTR MaLR 1 551 -4 244 203 0 127 chr5 11111350 11111380 -188518770 - MER46C DNA MER2_type -102 236 204 471 224 22 48 chr5 11111672 11111817 -188518333 - MIR SINE MIR -36 172 31 3218 110 0 5 chr5 11112069 11112155 -188517995 + L1PB1 LINE L1 5708 5793 -358 333 0 0 0 chr5 11112155 11112192 -188517958 + (CA)n Simple_repeat Simple_repeat 2 38 0 3218 110 0 5 chr5 11112192 11112549 -188517601 + L1PB1 LINE L1 5793 6149 -2 578 127 0 32 chr5 11112608 11112734 -188517416 + (TA)n Simple_repeat Simple_repeat 1 122 0 891 193 37 6 chr5 11113767 11113928 -188516222 + FRAM SINE Alu 1 160 -16 2335 79 0 0 chr5 11113931 11114241 -188515909 + AluSc SINE Alu 1 310 0 1061 289 73 35 chr5 11115449 11115941 -188514209 - MLT1J LTR MaLR 0 511 1 247 293 49 12 chr5 11116593 11116675 -188513475 + MIR SINE MIR 33 117 -91 20531 25 0 0 chr5 11116861 11119903 -188510247 - L1PA3 LINE L1 -3 6152 3100 586 267 85 6 chr5 11120567 11120743 -188509407 + MIR SINE MIR 18 207 -55 2011 135 3 3 chr5 11121353 11121650 -188508500 + AluSq SINE Alu 2 298 -15 1814 157 17 0 chr5 11122887 11123048 -188507102 - AluJb SINE Alu -17 295 125 2220 101 3 3 chr5 11123048 11123344 -188506806 - AluSc SINE Alu -13 296 1 1814 157 17 0 chr5 11123344 11123469 -188506681 - AluJb SINE Alu -187 125 4 22 0 0 0 chr5 11123475 11123497 -188506653 + AT_rich Low_complexity Low_complexity 1 22 0 1715 241 165 44 chr5 11123693 11124334 -188505816 + L1ME3A LINE L1 4742 5304 -866 5344 78 0 0 chr5 11124334 11124997 -188505153 + L1PA8 LINE L1 5503 6165 -7 1715 241 165 44 chr5 11124997 11125624 -188504526 + L1ME3A LINE L1 5304 6165 -5 275 227 53 0 chr5 11126499 11126574 -188503576 - 7SK RNA RNA -100 93 15 485 92 41 0 chr5 11126579 11126677 -188503473 + (TA)n Simple_repeat Simple_repeat 1 102 0 2896 138 20 35 chr5 11126681 11126700 -188503450 - MER31A LTR ERV1 0 485 467 1453 165 12 92 chr5 11126700 11127028 -188503122 + AluJo SINE Alu 1 302 -10 2896 138 20 35 chr5 11127028 11127500 -188502650 - MER31A LTR ERV1 -18 467 1 238 246 15 0 chr5 11128761 11128826 -188501324 - L1MB4 LINE L1 0 6180 6115 253 286 0 0 chr5 11129607 11129684 -188500466 + L2 LINE L2 3235 3311 -2 330 293 14 21 chr5 11129862 11130002 -188500148 + CT-rich Low_complexity Low_complexity 3 141 0 1258 144 0 33 chr5 11130448 11130663 -188499487 - L1MA9 LINE L1 -5 6307 6100 24 53 0 0 chr5 11131113 11131151 -188498999 + AT_rich Low_complexity Low_complexity 1 38 0 299 180 66 0 chr5 11131453 11131514 -188498636 - L1MA9 LINE L1 -5 6307 6243 1156 199 5 23 chr5 11133078 11133299 -188496851 + MER58A DNA MER1_type 6 222 -2 2233 203 65 15 chr5 11133569 11134047 -188496103 - MLT1D LTR MaLR -3 502 1 342 0 0 0 chr5 11134574 11134612 -188495538 + (A)n Simple_repeat Simple_repeat 1 38 0 1956 158 78 45 chr5 11134623 11134778 -188495372 + MLT1B LTR MaLR 1 150 -240 2243 115 3 0 chr5 11134778 11135083 -188495067 + AluSx SINE Alu 5 310 -2 1956 158 78 45 chr5 11135083 11135301 -188494849 + MLT1B LTR MaLR 150 386 -4 375 188 83 21 chr5 11135346 11135442 -188494708 - LTR16A1 LTR ERVL -351 106 5 305 266 164 83 chr5 11137222 11137382 -188492768 - L2 LINE L2 -197 3116 2970 2512 195 74 55 chr5 11137382 11137925 -188492225 + MLT2B3 LTR ERVL 2 554 0 305 266 164 83 chr5 11137925 11138155 -188491995 - L2 LINE L2 -343 2970 2694 212 289 134 35 chr5 11138476 11138618 -188491532 + MIR3 SINE MIR 30 185 -23 2282 112 0 0 chr5 11138815 11139110 -188491040 + AluSx SINE Alu 1 295 -17 428 279 38 25 chr5 11139367 11139525 -188490625 + LTR67 LTR ERVL 29 188 -369 557 280 116 57 chr5 11139915 11140493 -188489657 - L1MC4a LINE L1 -1904 5904 5293 23 33 0 0 chr5 11140676 11140706 -188489444 + AT_rich Low_complexity Low_complexity 1 30 0 571 294 82 77 chr5 11140876 11141670 -188488480 + L1M4 LINE L1 4027 4824 -1322 600 263 53 13 chr5 11142110 11142262 -188487888 - MER5A DNA MER1_type 0 189 32 504 32 0 0 chr5 11142326 11142388 -188487762 + (CA)n Simple_repeat Simple_repeat 1 62 0 6684 205 25 100 chr5 11142599 11144648 -188485502 + L1M4 LINE L1 5 1934 -4712 1916 139 17 46 chr5 11144684 11145029 -188485121 + THE1B LTR MaLR 30 364 0 1836 154 4 4 chr5 11145029 11145309 -188484841 + AluJb SINE Alu 14 293 -19 586 274 95 21 chr5 11145314 11145841 -188484309 + L1M4 LINE L1 1926 2577 -4069 1510 180 92 30 chr5 11146661 11147061 -188483089 + MER69 DNA AcHobo 2089 2513 -13 1540 53 5 0 chr5 11147293 11147483 -188482667 - AluY SINE Alu -5 306 116 910 286 84 23 chr5 11147624 11148120 -188482030 - L2 LINE L2 -60 3253 2723 326 296 74 81 chr5 11148484 11149163 -188480987 - L1ME4a LINE L1 -43 6078 5405 2260 103 3 7 chr5 11149317 11149619 -188480531 - AluSg SINE Alu -9 301 1 993 123 54 74 chr5 11150943 11151146 -188479004 + MER20 DNA MER1_type 16 214 -5 185 300 33 0 chr5 11151853 11151913 -188478237 - MIR SINE MIR -73 189 128 240 231 77 87 chr5 11151943 11152047 -188478103 + MIR SINE MIR 94 196 -66 343 349 113 14 chr5 11152240 11152452 -188477698 + MIR SINE MIR 21 253 -9 502 295 136 30 chr5 11152877 11153216 -188476934 + L1ME LINE L1 5417 5791 -330 2432 97 0 0 chr5 11153537 11153845 -188476305 + AluSq SINE Alu 2 309 -4 498 149 0 0 chr5 11154729 11154816 -188475334 + (A)n Simple_repeat Simple_repeat 1 87 0 246 32 0 0 chr5 11154898 11154929 -188475221 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2686 185 92 7 chr5 11155297 11155882 -188474268 - L1MB4 LINE L1 -5 6175 5541 211 296 217 35 chr5 11156441 11156628 -188473522 - MIR3 SINE MIR -35 227 12 286 200 0 0 chr5 11156762 11156817 -188473333 - MIR SINE MIR -95 167 113 2327 100 0 3 chr5 11157717 11158017 -188472133 + AluSx SINE Alu 1 299 -13 249 260 0 27 chr5 11158646 11158719 -188471431 + 7SK RNA RNA 3 73 -120 369 62 0 0 chr5 11159085 11159133 -188471017 + (TA)n Simple_repeat Simple_repeat 1 48 0 1933 156 3 10 chr5 11159134 11159429 -188470721 - AluSx SINE Alu -19 293 1 447 19 0 0 chr5 11160857 11160909 -188469241 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 892 182 18 0 chr5 11161496 11161666 -188468484 - L1MD2 LINE L1 0 6359 6187 22 35 0 0 chr5 11162770 11162799 -188467351 + AT_rich Low_complexity Low_complexity 1 29 0 705 186 81 59 chr5 11163679 11163872 -188466278 - MER20 DNA MER1_type -2 217 19 1475 243 0 7 chr5 11163985 11164273 -188465877 - AluJo SINE Alu -26 286 1 6969 139 18 22 chr5 11164820 11165967 -188464183 - Tigger1 DNA MER2_type 0 2418 1276 16563 166 36 8 chr5 11165972 11165998 -188464152 - L1P5 LINE L1 -333 6534 6510 216 0 0 0 chr5 11165998 11166022 -188464128 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 239 0 32 0 chr5 11166021 11166052 -188464098 + (TA)n Simple_repeat Simple_repeat 1 32 0 16563 166 36 8 chr5 11166022 11172360 -188457790 - L1P5 LINE L1 -357 6510 23 5322 145 44 35 chr5 11172367 11173313 -188456837 - Tigger1 DNA MER2_type -1463 955 1 494 207 21 7 chr5 11175654 11175799 -188454351 + CT-rich Low_complexity Low_complexity 1 147 0 378 266 319 35 chr5 11175806 11175865 -188454285 - L2 LINE L2 -11 3302 3261 3433 155 15 20 chr5 11175865 11176470 -188453680 - MER7C DNA MER2_type 0 602 1 378 266 319 35 chr5 11176470 11176692 -188453458 - L2 LINE L2 -52 3261 2941 1216 279 63 64 chr5 11176834 11177440 -188452710 - L2 LINE L2 -540 2774 2170 328 314 59 46 chr5 11177564 11177870 -188452280 - L1M4 LINE L1 -2314 3832 3523 396 329 121 22 chr5 11177892 11178123 -188452027 - MIR SINE MIR 0 262 9 425 336 60 20 chr5 11178192 11178442 -188451708 + MLT1K LTR MaLR 3 262 -326 310 276 65 65 chr5 11178487 11178701 -188451449 + MLT1K LTR MaLR 346 559 -29 186 350 0 30 chr5 11179876 11179976 -188450174 - MIR3 SINE MIR -5 203 107 28 71 0 0 chr5 11180999 11181055 -188449095 + AT_rich Low_complexity Low_complexity 1 56 0 26 0 0 0 chr5 11182778 11182804 -188447346 + AT_rich Low_complexity Low_complexity 1 26 0 494 272 166 34 chr5 11183392 11183657 -188446493 + L2 LINE L2 3014 3313 0 856 276 83 21 chr5 11185038 11185422 -188444728 + MLT1J2 LTR MaLR 41 448 -2 1673 191 14 11 chr5 11185598 11185965 -188444185 - L1MB3 LINE L1 -3 6180 5813 252 143 0 0 chr5 11185965 11186007 -188444143 - L1M3 LINE L1 -329 5854 5813 268 119 0 0 chr5 11186007 11186049 -188444101 - L1M3 LINE L1 -329 5854 5813 1946 176 8 8 chr5 11186049 11186424 -188443726 - L1MB3 LINE L1 -329 5854 5480 22 0 0 0 chr5 11186995 11187017 -188443133 + AT_rich Low_complexity Low_complexity 1 22 0 828 257 13 29 chr5 11187488 11188000 -188442150 + L1ME2 LINE L1 5493 6102 -62 333 257 0 73 chr5 11188201 11188310 -188441840 + L1ME4a LINE L1 5264 5364 -2444 398 297 57 31 chr5 11188364 11188556 -188441594 + L1ME4a LINE L1 5257 5453 -2355 223 186 0 0 chr5 11188584 11188627 -188441523 + T-rich Low_complexity Low_complexity 1 43 0 356 176 14 54 chr5 11188849 11188923 -188441227 + L2 LINE L2 3236 3306 -7 1126 216 53 104 chr5 11189055 11189486 -188440664 - MLT2B1 LTR ERVL 0 414 6 297 321 0 0 chr5 11189491 11189597 -188440553 + L1ME4a LINE L1 5568 5673 -448 387 280 95 43 chr5 11189658 11189962 -188440188 + L1ME4a LINE L1 5761 6080 -41 1799 171 53 8 chr5 11190274 11190648 -188439502 + L1MB2 LINE L1 5777 6167 -4 884 259 21 13 chr5 11190877 11191113 -188439037 - MIR SINE MIR 0 262 25 421 293 140 6 chr5 11191132 11191289 -188438861 - MER5A DNA MER1_type -3 186 9 22 35 0 0 chr5 11192733 11192762 -188437388 + AT_rich Low_complexity Low_complexity 1 29 0 2448 53 0 47 chr5 11192786 11193106 -188437044 - AluY SINE Alu -6 305 1 1347 247 130 61 chr5 11193321 11193889 -188436261 + MLT1E2 LTR MaLR 1 624 0 309 191 40 91 chr5 11194550 11194727 -188435423 - MLT1H LTR MaLR 0 525 325 474 277 61 19 chr5 11194795 11195008 -188435142 - MLT1H LTR MaLR -325 224 3 405 342 53 30 chr5 11195016 11195317 -188434833 - MLT1I LTR MaLR -65 344 37 21 82 0 0 chr5 11196058 11196107 -188434043 + AT_rich Low_complexity Low_complexity 1 49 0 1384 213 62 37 chr5 11196438 11196842 -188433308 + MLT1C LTR MaLR 41 461 -6 248 227 297 16 chr5 11197544 11197672 -188432478 - MIR SINE MIR -11 251 88 785 221 147 78 chr5 11197675 11198207 -188431943 - MLT1E3 LTR MaLR 0 624 1 446 254 16 32 chr5 11198386 11198512 -188431638 + MIR SINE MIR 118 241 -21 382 308 87 36 chr5 11199421 11199755 -188430395 + L1MC3 LINE L1 2173 2523 -3873 206 326 35 23 chr5 11199820 11199906 -188430244 - L2 LINE L2 -9 3263 3177 16208 201 20 11 chr5 11200418 11202969 -188427181 + L1PA15 LINE L1 1532 4059 -2757 2227 158 44 0 chr5 11202969 11203355 -188426795 + MER57A LTR ERV1 1 403 0 16208 201 20 11 chr5 11203355 11206043 -188424107 + L1PA15 LINE L1 4059 6813 -3 32 95 0 0 chr5 11206258 11206353 -188423797 + AT_rich Low_complexity Low_complexity 1 95 0 468 327 36 6 chr5 11207186 11207354 -188422796 + MIR SINE MIR 33 205 -57 825 237 93 13 chr5 11207523 11207823 -188422327 + L1MC3 LINE L1 4143 4466 -1749 212 59 29 0 chr5 11207836 11207870 -188422280 + (TA)n Simple_repeat Simple_repeat 1 35 0 740 218 16 0 chr5 11207882 11208070 -188422080 + L1MC3 LINE L1 4534 4724 -1491 * 2502 194 14 42 chr5 11208068 11208138 -188422012 - L1 LINE L1 -1807 4339 4269 2417 108 0 0 chr5 11208138 11208445 -188421705 - AluSc SINE Alu -2 307 1 2502 194 14 42 chr5 11208445 11208997 -188421153 - L1 LINE L1 -1877 4269 3734 8770 197 37 67 chr5 11209001 11209526 -188420624 + L1MC3 LINE L1 4713 5252 -2812 4340 95 5 5 chr5 11209526 11210155 -188419995 + L1PA13 LINE L1 5532 6160 -3 8770 197 37 67 chr5 11210155 11210634 -188419516 + L1MC3 LINE L1 5252 5744 -2320 561 220 0 9 chr5 11210634 11210743 -188419407 + AluJo SINE Alu 120 227 -85 6391 94 10 4 chr5 11210744 11211687 -188418463 + L1PA10 LINE L1 5221 6168 0 8770 197 37 67 chr5 11211687 11213502 -188416648 + L1MC3 LINE L1 5744 7750 -314 1934 123 3 34 chr5 11213502 11213795 -188416355 + AluSx SINE Alu 1 284 -28 8770 197 37 67 chr5 11213795 11214100 -188416050 + L1MC3 LINE L1 7750 8063 -1 198 0 0 0 chr5 11214263 11214285 -188415865 + (A)n Simple_repeat Simple_repeat 1 22 0 434 255 176 7 chr5 11214491 11214644 -188415506 + MER5A DNA MER1_type 4 182 -7 183 319 159 35 chr5 11214694 11214807 -188415343 + L2 LINE L2 3109 3235 -37 27 29 0 0 chr5 11215913 11215947 -188414203 + AT_rich Low_complexity Low_complexity 1 34 0 513 253 77 22 chr5 11216306 11216488 -188413662 - MER117 DNA MER1_type -3 194 3 3537 144 30 16 chr5 11216764 11217253 -188412897 + L1MA5 LINE L1 5625 6127 -173 847 200 42 0 chr5 11217253 11217418 -188412732 - FAM SINE Alu -3 172 1 3537 144 30 16 chr5 11217418 11217595 -188412555 + L1MA5 LINE L1 6127 6300 0 27 108 0 0 chr5 11218131 11218242 -188411908 + AT_rich Low_complexity Low_complexity 1 111 0 2106 147 3 0 chr5 11218592 11218899 -188411251 - AluSq SINE Alu -5 308 1 308 250 18 27 chr5 11219287 11219399 -188410751 + GA-rich Low_complexity Low_complexity 2 112 0 416 293 159 21 chr5 11219410 11219700 -188410450 + L1ME4a LINE L1 5742 6071 -50 2196 81 7 24 chr5 11219709 11220004 -188410146 - AluSp SINE Alu -23 290 1 2085 194 52 47 chr5 11220161 11220780 -188409370 + LTR29 LTR ERV1 1 622 0 196 154 39 0 chr5 11221903 11221955 -188408195 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 1647 233 113 53 chr5 11221997 11222041 -188408109 - Charlie2a DNA MER1_type -177 2685 2645 705 240 88 0 chr5 11222041 11222212 -188407938 + MER5A DNA MER1_type 1 186 -3 1647 233 113 53 chr5 11222212 11222996 -188407154 - Charlie2a DNA MER1_type -217 2645 1807 401 229 95 56 chr5 11223196 11223375 -188406775 - Charlie2a DNA MER1_type -1181 1681 1496 276 269 47 41 chr5 11223536 11223707 -188406443 - Charlie2a DNA MER1_type -2278 584 413 1229 221 174 43 chr5 11223754 11224192 -188405958 + MLT1D LTR MaLR 1 495 -10 2035 121 3 50 chr5 11225961 11226283 -188403867 + AluSp SINE Alu 1 307 -6 213 310 113 21 chr5 11227716 11227858 -188402292 + MIR SINE MIR 17 171 -91 2188 115 0 7 chr5 11229020 11229316 -188400834 + AluSx SINE Alu 9 302 -10 234 227 45 11 chr5 11229327 11229415 -188400735 + L1MC/D LINE L1 2938 3028 -3118 2249 113 3 0 chr5 11229466 11229775 -188400375 + AluSp SINE Alu 1 310 -3 204 200 0 0 chr5 11229798 11229843 -188400307 + GA-rich Low_complexity Low_complexity 3 47 0 264 307 27 20 chr5 11230883 11231033 -188399117 + L1MC/D LINE L1 4497 4647 -1499 236 279 19 67 chr5 11232667 11232771 -188397379 - L3b LINE CR1 -92 1491 1393 2204 157 8 38 chr5 11233335 11233730 -188396420 - MLT1B LTR MaLR -7 383 1 387 41 0 0 chr5 11233939 11233988 -188396162 + (CA)n Simple_repeat Simple_repeat 2 50 0 955 169 47 42 chr5 11234993 11235206 -188394944 + MER20 DNA MER1_type 1 214 -5 464 240 72 8 chr5 11235259 11235384 -188394766 + MLT1H LTR MaLR 417 549 0 1013 294 59 25 chr5 11237307 11237745 -188392405 + L1MC/D LINE L1 5315 5767 -2041 1944 134 0 11 chr5 11238288 11238572 -188391578 + AluSq SINE Alu 1 281 -32 1662 105 0 0 chr5 11240177 11240423 -188389727 + AluSg/x SINE Alu 65 310 0 569 263 105 70 chr5 11241531 11241753 -188388397 - MLT1L LTR MaLR -112 503 267 1346 73 0 0 chr5 11241753 11241917 -188388233 + L1PA8 LINE L1 6009 6172 0 569 263 105 70 chr5 11241917 11241979 -188388171 - MLT1L LTR MaLR -348 267 209 2124 218 121 0 chr5 11242151 11242632 -188387518 + MLT1F LTR MaLR 4 542 0 287 294 220 0 chr5 11242716 11242893 -188387257 + Charlie8 DNA MER1_type 45 260 -2157 1300 129 13 67 chr5 11243252 11243583 -188386567 + L1MB1 LINE L1 5157 5474 -743 340 142 55 8 chr5 11243583 11243710 -188386440 + (TA)n Simple_repeat Simple_repeat 2 134 0 4040 136 22 14 chr5 11243710 11244378 -188385772 + L1MB1 LINE L1 5472 6145 -23 189 0 0 0 chr5 11244379 11244400 -188385750 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1887 129 18 7 chr5 11244402 11244682 -188385468 - AluSx SINE Alu -29 283 1 234 91 0 0 chr5 11244733 11244766 -188385384 + (GGGA)n Simple_repeat Simple_repeat 4 36 0 284 217 0 0 chr5 11244853 11244913 -188385237 + Charlie8 DNA MER1_type 1356 1415 -1002 2321 165 22 2 chr5 11245018 11245418 -188384732 + MLT2C2 LTR ERVL 1 408 -56 228 125 0 0 chr5 11245585 11245617 -188384533 + MLT2C2 LTR ERVL 523 554 0 349 321 67 6 chr5 11247174 11247339 -188382811 + MIR SINE MIR 58 232 -30 229 293 40 10 chr5 11247541 11247640 -188382510 + (CATA)n Simple_repeat Simple_repeat 2 103 0 2156 146 18 15 chr5 11248828 11249170 -188380980 + MER61A LTR ERV1 1 343 0 23 0 0 0 chr5 11249244 11249267 -188380883 + AT_rich Low_complexity Low_complexity 1 23 0 241 278 28 0 chr5 11250073 11250145 -188380005 + L1 LINE L1 4498 4571 -1575 469 289 42 33 chr5 11250389 11250656 -188379494 + L1 LINE L1 4918 5190 -971 2097 111 3 38 chr5 11250656 11250971 -188379179 - AluSc SINE Alu -5 304 1 469 289 42 33 chr5 11250971 11251198 -188378952 + L1 LINE L1 5190 5413 -748 728 165 17 9 chr5 11251209 11251354 -188378796 + FLAM_C SINE Alu 2 147 0 1277 251 44 84 chr5 11251364 11252064 -188378086 + L1MC4 LINE L1 7332 8003 -39 402 359 59 30 chr5 11252133 11252349 -188377801 + L2 LINE L2 1799 2034 -1280 2430 36 40 10 chr5 11252349 11252651 -188377499 + AluY SINE Alu 1 311 0 402 359 59 30 chr5 11252651 11252838 -188377312 + L2 LINE L2 2034 2214 -1100 621 296 45 38 chr5 11252885 11253325 -188376825 - MLT1H LTR MaLR 0 549 29 946 218 143 47 chr5 11254706 11255091 -188375059 + MLT1F1 LTR MaLR 144 565 -2 192 77 0 0 chr5 11257039 11257065 -188373085 + (T)n Simple_repeat Simple_repeat 1 26 0 6464 118 62 79 chr5 11257828 11259133 -188371017 + pTR5 LTR ERV1 743 2025 -413 327 229 31 0 chr5 11259133 11259229 -188370921 + LTR30 LTR ERV1 544 642 -80 920 122 0 7 chr5 11259232 11259371 -188370779 + pTR5 LTR ERV1 172 309 -2129 426 255 176 7 chr5 11260195 11260348 -188369802 - MER5A DNA MER1_type -7 182 4 9325 187 19 56 chr5 11260737 11261042 -188369108 - L1MC3 LINE L1 0 7785 7470 1932 123 3 34 chr5 11261042 11261335 -188368815 - AluSx SINE Alu -28 284 1 9325 187 19 56 chr5 11261335 11263149 -188367001 - L1MC3 LINE L1 -315 7470 5744 19935 34 2 0 chr5 11263151 11266214 -188363936 - L1PA10 LINE L1 0 6168 3100 586 267 85 6 chr5 11266879 11267055 -188363095 + MIR SINE MIR 18 207 -55 2011 135 3 3 chr5 11267665 11267962 -188362188 + AluSq SINE Alu 2 298 -15 1814 157 17 0 chr5 11269199 11269360 -188360790 - AluJb SINE Alu -17 295 125 2203 102 3 3 chr5 11269360 11269654 -188360496 - AluSc SINE Alu -15 294 1 1814 157 17 0 chr5 11269654 11269779 -188360371 - AluJb SINE Alu -187 125 4 22 0 0 0 chr5 11269785 11269807 -188360343 + AT_rich Low_complexity Low_complexity 1 22 0 1702 243 165 45 chr5 11270003 11270645 -188359505 + L1ME3A LINE L1 4742 5305 -865 5344 78 0 0 chr5 11270645 11271308 -188358842 + L1PA8 LINE L1 5503 6165 -7 1702 243 165 45 chr5 11271308 11271935 -188358215 + L1ME3A LINE L1 5305 6165 -5 275 227 53 0 chr5 11272810 11272885 -188357265 - 7SK RNA RNA -100 93 15 392 89 69 0 chr5 11272890 11272991 -188357159 + (TA)n Simple_repeat Simple_repeat 1 108 0 739 145 0 90 chr5 11273010 11273155 -188356995 + AluJ SINE Alu 2 133 -169 791 180 12 66 chr5 11273159 11273326 -188356824 + AluJ SINE Alu 130 287 -25 2924 139 21 25 chr5 11273335 11273818 -188356332 - MER31A LTR ERV1 -4 481 1 238 246 15 0 chr5 11275108 11275173 -188354977 - L1MB4 LINE L1 0 6180 6115 253 286 0 0 chr5 11275954 11276031 -188354119 + L2 LINE L2 3235 3311 -2 330 293 14 21 chr5 11276209 11276349 -188353801 + CT-rich Low_complexity Low_complexity 3 141 0 1258 144 0 33 chr5 11276795 11277010 -188353140 - L1MA9 LINE L1 -5 6307 6100 299 180 66 0 chr5 11277800 11277861 -188352289 - L1MA9 LINE L1 -5 6307 6243 1156 199 5 23 chr5 11279425 11279646 -188350504 + MER58A DNA MER1_type 6 222 -2 2233 203 65 15 chr5 11279916 11280394 -188349756 - MLT1D LTR MaLR -3 502 1 444 19 0 0 chr5 11280922 11280975 -188349175 + (A)n Simple_repeat Simple_repeat 1 53 0 1956 158 78 45 chr5 11280986 11281141 -188349009 + MLT1B LTR MaLR 1 150 -240 2243 115 3 0 chr5 11281141 11281446 -188348704 + AluSx SINE Alu 5 310 -2 1956 158 78 45 chr5 11281446 11281664 -188348486 + MLT1B LTR MaLR 150 386 -4 375 188 83 21 chr5 11281709 11281805 -188348345 - LTR16A1 LTR ERVL -351 106 5 305 266 164 83 chr5 11283585 11283745 -188346405 - L2 LINE L2 -197 3116 2970 2525 193 74 55 chr5 11283745 11284288 -188345862 + MLT2B3 LTR ERVL 2 554 0 305 266 164 83 chr5 11284288 11284518 -188345632 - L2 LINE L2 -343 2970 2694 212 289 134 35 chr5 11284839 11284981 -188345169 + MIR3 SINE MIR 30 185 -23 2282 112 0 0 chr5 11285178 11285473 -188344677 + AluSx SINE Alu 1 295 -17 428 279 38 25 chr5 11285730 11285888 -188344262 + LTR67 LTR ERVL 29 188 -369 557 280 116 57 chr5 11286278 11286856 -188343294 - L1MC4a LINE L1 -1904 5904 5293 23 33 0 0 chr5 11287039 11287069 -188343081 + AT_rich Low_complexity Low_complexity 1 30 0 571 294 82 77 chr5 11287239 11288033 -188342117 + L1M4 LINE L1 4027 4824 -1322 600 263 53 13 chr5 11288473 11288625 -188341525 - MER5A DNA MER1_type 0 189 32 396 40 0 0 chr5 11288689 11288739 -188341411 + (CA)n Simple_repeat Simple_repeat 1 50 0 6668 205 25 100 chr5 11288950 11290999 -188339151 + L1M4 LINE L1 5 1934 -4712 1916 139 17 46 chr5 11291035 11291380 -188338770 + THE1B LTR MaLR 30 364 0 1836 154 4 4 chr5 11291380 11291660 -188338490 + AluJb SINE Alu 14 293 -19 586 274 95 21 chr5 11291665 11292192 -188337958 + L1M4 LINE L1 1926 2577 -4069 1510 180 92 30 chr5 11293012 11293412 -188336738 + MER69 DNA AcHobo 2089 2513 -13 1540 53 5 0 chr5 11293643 11293833 -188336317 - AluY SINE Alu -5 306 116 910 286 84 23 chr5 11293974 11294470 -188335680 - L2 LINE L2 -60 3253 2723 347 285 76 83 chr5 11294834 11295449 -188334701 - L1ME4a LINE L1 -43 6078 5468 1541 107 42 106 chr5 11345464 11345747 -188284403 + pTR5 LTR ERV1 172 581 -133 425 35 35 0 chr5 11348569 11348626 -188281524 - L1PA4 LINE L1 -2 6153 6095 1943 140 97 32 chr5 11349693 11350035 -188280115 + THE1B LTR MaLR 1 364 0 414 345 24 73 chr5 11350508 11350890 -188279260 + L2 LINE L2 2883 3245 -27 581 352 101 17 chr5 11350918 11351485 -188278665 - L2 LINE L2 -47 3266 2639 227 298 18 26 chr5 11351522 11351636 -188278514 - L2 LINE L2 -831 2483 2371 2419 159 5 10 chr5 11351734 11352131 -188278019 - MLT2C1 LTR ERVL -2 395 1 1381 201 0 0 chr5 11352183 11352407 -188277743 + MER58A DNA MER1_type 1 224 0 1923 186 8 37 chr5 11352946 11353322 -188276828 + MLT1A1 LTR MaLR 1 365 0 210 324 55 41 chr5 11353582 11353727 -188276423 - MIR SINE MIR 0 262 116 26 0 0 0 chr5 11353824 11353850 -188276300 + AT_rich Low_complexity Low_complexity 1 26 0 2086 141 143 8 chr5 11353897 11354267 -188275883 - MSTA LTR MaLR 0 428 9 911 293 113 3 chr5 11355378 11355706 -188274444 + LTR16C LTR ERVL 128 491 0 567 284 20 26 chr5 11356288 11356507 -188273643 + MIR SINE MIR 41 257 -5 22 0 0 0 chr5 11357990 11358012 -188272138 + AT_rich Low_complexity Low_complexity 1 22 0 406 135 289 19 chr5 11358808 11358912 -188271238 + MER104 DNA Tc2 46 177 -3 278 245 21 21 chr5 11359148 11359242 -188270908 + MER103 DNA DNA 72 165 -1 214 286 131 24 chr5 11359284 11359368 -188270782 - MIR SINE MIR -133 129 37 22 0 0 0 chr5 11360107 11360129 -188270021 + AT_rich Low_complexity Low_complexity 1 22 0 357 283 28 9 chr5 11360231 11360337 -188269813 - MIR3 SINE MIR -30 178 71 2008 98 38 21 chr5 11360891 11361178 -188268972 - AluSp SINE Alu -21 292 1 1181 62 0 0 chr5 11362314 11362458 -188267692 - L1PA4 LINE L1 -3 6152 6009 22 70 0 0 chr5 11362930 11362973 -188267177 + AT_rich Low_complexity Low_complexity 1 43 0 407 200 12 24 chr5 11363649 11363734 -188266416 + MLT1D LTR MaLR 1 84 -421 606 339 178 23 chr5 11363982 11364443 -188265707 - L2 LINE L2 -571 2743 2355 7545 64 2 3 chr5 11364443 11365942 -188264208 + L1PA8 LINE L1 4674 6172 0 606 339 178 23 chr5 11365942 11366273 -188263877 - L2 LINE L2 -959 2355 1828 2413 164 24 12 chr5 11366292 11366706 -188263444 - MSTB1 LTR MaLR -13 419 1 354 359 116 22 chr5 11366713 11367117 -188263033 - L2 LINE L2 -1493 1821 1380 613 108 0 0 chr5 11367222 11367305 -188262845 - AluSg/x SINE Alu -9 301 219 2497 160 33 16 chr5 11367396 11367821 -188262329 - MSTB1 LTR MaLR 0 432 1 241 273 45 45 chr5 11368732 11368864 -188261286 - MLT1J2 LTR MaLR -31 419 288 1033 289 72 35 chr5 11368939 11369395 -188260755 + LTR33 LTR ERVL 3 475 -46 318 291 46 20 chr5 11369414 11369565 -188260585 - MLT1J1 LTR MaLR -287 159 5 207 309 0 0 chr5 11370299 11370354 -188259796 + MIR3 SINE MIR 152 206 -2 7901 32 3 0 chr5 11371549 11372978 -188257172 - L1PA4 LINE L1 -4 6151 4716 8450 27 15 0 chr5 11372978 11373963 -188256187 + L1PA4 LINE L1 3718 4717 -1429 3866 121 73 38 chr5 11374169 11374298 -188255852 - MER41B LTR ERV1 0 635 512 2256 104 7 3 chr5 11374298 11374605 -188255545 + AluSx SINE Alu 1 308 -4 3866 121 73 38 chr5 11374605 11375088 -188255062 - MER41B LTR ERV1 -123 512 1 446 223 126 94 chr5 11375158 11375540 -188254610 - MER31-int LTR ERV1 -1619 3317 2924 202 246 0 18 chr5 11377646 11377703 -188252447 + A-rich Low_complexity Low_complexity 2 57 0 419 202 20 0 chr5 11377843 11377942 -188252208 - LTR37A LTR ERV1 -3 423 323 25 75 0 0 chr5 11378136 11378189 -188251961 + AT_rich Low_complexity Low_complexity 1 53 0 233 321 124 7 chr5 11378234 11378371 -188251779 + MIR3 SINE MIR 32 184 -24 396 263 56 44 chr5 11378400 11378560 -188251590 + MER5A DNA MER1_type 27 188 -1 3284 261 27 15 chr5 11378886 11379890 -188250260 + L1ME4a LINE L1 3176 4191 -1955 632 79 11 0 chr5 11379900 11379989 -188250161 + 5S rRNA rRNA 1 90 -31 540 226 16 8 chr5 11379989 11380113 -188250037 + L1ME4a LINE L1 4195 4319 -1827 2339 96 0 7 chr5 11382216 11382518 -188247632 + AluSc SINE Alu 1 300 -9 465 282 102 63 chr5 11383697 11384140 -188246010 + L1ME4a LINE L1 5566 6025 -96 26 64 0 0 chr5 11384185 11384232 -188245918 + AT_rich Low_complexity Low_complexity 1 47 0 453 251 77 158 chr5 11385852 11386368 -188243782 + L2 LINE L2 2021 2577 -736 454 256 139 0 chr5 11386368 11386505 -188243645 + MIR SINE MIR 22 177 -85 453 251 77 158 chr5 11386505 11386645 -188243505 + L2 LINE L2 2577 2727 -586 2092 113 20 0 chr5 11386645 11386938 -188243212 + AluSx SINE Alu 5 303 -9 453 251 77 158 chr5 11386938 11387270 -188242880 + L2 LINE L2 2727 3053 -260 336 234 9 65 chr5 11387294 11387401 -188242749 + L2 LINE L2 472 572 -2742 310 296 109 23 chr5 11387469 11387726 -188242424 + L2 LINE L2 869 1147 -2167 8042 145 19 7 chr5 11387777 11390198 -188239952 - L1MA3 LINE L1 -6 7718 5264 23625 149 18 16 chr5 11390233 11395558 -188234592 - L1MA3 LINE L1 -2214 5351 1 534 257 219 25 chr5 11395558 11395795 -188234355 + L2 LINE L2 1218 1500 -1814 15275 134 24 15 chr5 11395797 11396873 -188233277 - Tigger1 DNA MER2_type 0 2418 1353 2817 16 0 0 chr5 11396873 11397177 -188232973 - AluYb8 SINE Alu -13 305 2 15275 134 24 15 chr5 11397177 11397996 -188232154 - Tigger1 DNA MER2_type -1065 1353 494 2592 179 17 2 chr5 11397996 11398416 -188231734 + MSTB LTR MaLR 1 426 0 15275 134 24 15 chr5 11398416 11398915 -188231235 - Tigger1 DNA MER2_type -1924 494 1 180 211 0 26 chr5 11398921 11398959 -188231191 + MER5A DNA MER1_type 147 183 -6 949 299 123 43 chr5 11398971 11399624 -188230526 + L2 LINE L2 1505 2209 -1105 228 219 0 0 chr5 11399631 11399672 -188230478 - MLT2C1 LTR ERVL 0 397 357 216 0 0 0 chr5 11399672 11399696 -188230454 + (TG)n Simple_repeat Simple_repeat 1 24 0 1711 173 50 29 chr5 11399731 11400073 -188230077 + MLT2C1 LTR ERVL 30 485 -35 323 26 0 0 chr5 11400069 11400108 -188230042 - MLT2C1 LTR ERVL -356 41 3 * 1173 291 167 16 chr5 11400112 11401069 -188229081 + L2 LINE L2 2215 3313 0 21 0 0 0 chr5 11402588 11402609 -188227541 + AT_rich Low_complexity Low_complexity 1 21 0 808 260 28 44 chr5 11402906 11403156 -188226994 + MIR SINE MIR 15 260 -2 1481 221 88 16 chr5 11403619 11404004 -188226146 - MLT1C LTR MaLR -54 413 1 273 265 140 22 chr5 11404868 11405004 -188225146 + MARNA DNA Mariner 281 432 -154 505 268 60 36 chr5 11405527 11405695 -188224455 - MER5B DNA MER1_type -4 174 3 262 310 112 35 chr5 11406068 11406184 -188223966 + L2 LINE L2 3143 3267 -5 330 238 33 57 chr5 11407064 11407186 -188222964 - MIR3 SINE MIR -7 201 83 22 0 0 0 chr5 11407595 11407617 -188222533 + AT_rich Low_complexity Low_complexity 1 22 0 880 259 32 16 chr5 11408508 11408759 -188221391 - HsTC2c DNA Tc2 -5 724 470 688 285 121 16 chr5 11408796 11409101 -188221049 - MLT1I LTR MaLR -19 390 54 1312 285 21 5 chr5 11409180 11409563 -188220587 - HsTC2c DNA Tc2 -312 417 29 204 97 0 0 chr5 11409595 11409626 -188220524 + (TG)n Simple_repeat Simple_repeat 2 32 0 1951 130 7 36 chr5 11409636 11409943 -188220207 - AluSx SINE Alu -14 298 1 231 36 0 0 chr5 11410193 11410221 -188219929 + (CA)n Simple_repeat Simple_repeat 2 29 0 412 222 111 92 chr5 11410364 11410420 -188219730 - MER5B DNA MER1_type -10 168 115 1976 177 0 0 chr5 11410420 11410731 -188219419 + AluSx SINE Alu 1 311 -1 412 222 111 92 chr5 11410731 11410827 -188219323 - MER5B DNA MER1_type -63 115 13 200 288 0 14 chr5 11411212 11411285 -188218865 + (CATATA)n Simple_repeat Simple_repeat 1 72 0 31 0 0 0 chr5 11413382 11413413 -188216737 + AT_rich Low_complexity Low_complexity 1 31 0 1337 138 23 23 chr5 11413954 11414171 -188215979 - L1MA5A LINE L1 -21 6276 6060 183 263 0 0 chr5 11414395 11414433 -188215717 + L2 LINE L2 3210 3247 -25 420 213 12 0 chr5 11415490 11415570 -188214580 - MER81 DNA DNA -32 82 2 306 73 0 0 chr5 11415724 11415765 -188214385 + (A)n Simple_repeat Simple_repeat 1 41 0 730 188 78 42 chr5 11416159 11416351 -188213799 + MER20 DNA MER1_type 1 199 -20 1638 216 66 46 chr5 11416918 11417417 -188212733 + L1MB7 LINE L1 5666 6174 -10 265 375 15 29 chr5 11417470 11417606 -188212544 + MIR SINE MIR 17 150 -58 767 184 123 0 chr5 11419118 11419281 -188210869 + MER20 DNA MER1_type 37 219 0 227 328 86 8 chr5 11419448 11419576 -188210574 - L2 LINE L2 -170 3102 2965 1559 223 36 31 chr5 11419749 11419913 -188210237 + MLT1A2 LTR MaLR 1 163 -211 1874 132 4 0 chr5 11419913 11420185 -188209965 + AluSx SINE Alu 1 273 -39 1559 223 36 31 chr5 11420185 11420379 -188209771 + MLT1A2 LTR MaLR 163 361 -13 1226 138 10 0 chr5 11420399 11420595 -188209555 + L1PB1 LINE L1 3 200 -6663 15044 155 47 13 chr5 11420595 11421624 -188208526 + L1PB1 LINE L1 634 1627 -5240 2304 96 0 3 chr5 11421624 11421926 -188208224 + AluY SINE Alu 1 301 -10 15044 155 47 13 chr5 11421926 11426874 -188203276 + L1PB1 LINE L1 1627 6865 -2 27 0 0 0 chr5 11426894 11426921 -188203229 + AT_rich Low_complexity Low_complexity 1 27 0 2977 233 84 56 chr5 11426974 11428305 -188201845 + MLT1A2-int LTR MaLR 5 1726 -9 1745 191 77 9 chr5 11428314 11428664 -188201486 + MLT1A2 LTR MaLR 1 374 0 403 164 27 0 chr5 11428809 11428882 -188201268 + L1MD2 LINE L1 6282 6356 -3 421 275 140 0 chr5 11429150 11429328 -188200822 + L2 LINE L2 1821 2023 -1291 2108 208 6 0 chr5 11430006 11430367 -188199783 + MLT1A1 LTR MaLR 1 363 -2 571 321 146 0 chr5 11430528 11430815 -188199335 + L2 LINE L2 2026 2354 -960 547 304 164 44 chr5 11430826 11431276 -188198874 + L2 LINE L2 2808 3311 -2 207 104 62 0 chr5 11431292 11431340 -188198810 + (TA)n Simple_repeat Simple_repeat 1 51 0 245 292 142 33 chr5 11431702 11431822 -188198328 - L2 LINE L2 -39 3233 3101 776 244 135 70 chr5 11431851 11431971 -188198179 + MLT1J LTR MaLR 71 182 -329 1815 189 141 12 chr5 11431971 11432383 -188197767 + MLT1C LTR MaLR 1 465 -2 776 244 135 70 chr5 11432383 11432676 -188197474 + MLT1J LTR MaLR 182 511 0 228 127 55 0 chr5 11434418 11434473 -188195677 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 310 262 103 8 chr5 11435880 11436006 -188194144 + L1ME4a LINE L1 5978 6115 -6 680 187 65 0 chr5 11436496 11436635 -188193515 + L1MB7 LINE L1 6017 6164 -20 1764 173 37 58 chr5 11436696 11437078 -188193072 - THE1C LTR MaLR -1 374 1 1002 256 209 2 chr5 11437411 11437833 -188192317 - MLT1H LTR MaLR -2 547 39 325 359 14 14 chr5 11438443 11438588 -188191562 - MER5B DNA MER1_type 0 178 34 683 290 98 45 chr5 11438865 11439262 -188190888 - MLT1J LTR MaLR -9 502 85 349 292 6 35 chr5 11439365 11439536 -188190614 + L1ME4a LINE L1 5678 5843 -278 217 299 13 13 chr5 11440839 11440916 -188189234 + MIR SINE MIR 65 141 -121 236 327 14 108 chr5 11441067 11441290 -188188860 + L2 LINE L2 2865 3066 -247 2316 96 0 0 chr5 11441348 11441649 -188188501 - AluY SINE Alu -10 301 1 284 289 149 35 chr5 11441676 11441877 -188188273 - L1MC4a LINE L1 -1893 5915 5692 180 0 0 0 chr5 11442020 11442040 -188188110 + (A)n Simple_repeat Simple_repeat 1 20 0 569 235 37 37 chr5 11442252 11442414 -188187736 - MER106B DNA MER1_type -1 1058 897 624 136 0 68 chr5 11442462 11442653 -188187497 + (GGGAA)n Simple_repeat Simple_repeat 2 179 0 219 127 36 18 chr5 11442653 11442708 -188187442 + GA-rich Low_complexity Low_complexity 2 57 0 186 133 0 0 chr5 11442734 11442764 -188187386 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 261 324 135 40 chr5 11442831 11443202 -188186948 - LTR33 LTR ERVL 0 521 116 2209 94 14 3 chr5 11443572 11443858 -188186292 + AluSq SINE Alu 9 297 -16 1048 240 71 106 chr5 11444120 11444176 -188185974 - L1MC4 LINE L1 -782 7179 7123 2679 99 34 6 chr5 11444176 11444530 -188185620 - THE1B LTR MaLR 0 364 1 1048 240 71 106 chr5 11444530 11445041 -188185109 - L1MC4 LINE L1 -838 7123 6637 28 102 0 0 chr5 11445052 11445150 -188185000 + AT_rich Low_complexity Low_complexity 1 98 0 447 330 122 36 chr5 11445749 11446453 -188183697 + L2 LINE L2 1933 2712 -602 1334 208 3 61 chr5 11446453 11446598 -188183552 + AluJb SINE Alu 1 120 -192 240 59 0 0 chr5 11446598 11446632 -188183518 + (CA)n Simple_repeat Simple_repeat 1 34 0 1334 208 3 61 chr5 11446632 11446799 -188183351 + AluJb SINE Alu 120 295 -17 447 330 122 36 chr5 11446799 11446874 -188183276 + L2 LINE L2 2712 2779 -535 191 276 16 114 chr5 11447020 11447110 -188183040 + L2 LINE L2 2935 3011 -261 2310 125 0 0 chr5 11447110 11447423 -188182727 - AluSq SINE Alu 0 313 1 191 276 16 114 chr5 11447423 11447455 -188182695 + L2 LINE L2 3011 3045 -227 312 91 0 0 chr5 11449148 11449175 -188180975 + (TGGA)n Simple_repeat Simple_repeat 1 71 0 312 91 0 0 chr5 11449175 11449219 -188180931 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 288 184 64 21 chr5 11449220 11449593 -188180557 + (TAGA)n Simple_repeat Simple_repeat 1 388 0 267 31 0 0 chr5 11449603 11449635 -188180515 + (CA)n Simple_repeat Simple_repeat 1 32 0 304 308 68 14 chr5 11450130 11450351 -188179799 + L1ME LINE L1 5497 5729 -392 324 294 42 25 chr5 11450706 11450825 -188179325 - L3b LINE CR1 -334 1249 1129 191 287 154 37 chr5 11450913 11451049 -188179101 - MIR3 SINE MIR -38 170 19 4497 101 5 15 chr5 11451783 11452389 -188177761 - MER4A LTR ERV1 0 600 1 21 0 0 0 chr5 11452715 11452736 -188177414 + AT_rich Low_complexity Low_complexity 1 21 0 315 217 101 0 chr5 11452738 11452807 -188177343 - MER116 DNA Mariner -4 76 1 353 305 153 25 chr5 11453197 11453400 -188176750 + MIR SINE MIR 24 252 -10 220 289 132 8 chr5 11454685 11454806 -188175344 + MIR3 SINE MIR 4 139 -69 2315 113 89 15 chr5 11454952 11455289 -188174861 + THE1B LTR MaLR 1 362 -2 1178 155 23 41 chr5 11455356 11455575 -188174575 - MER20 DNA MER1_type -4 215 1 560 293 153 58 chr5 11455740 11456010 -188174140 + ERVL LTR ERVL 900 1143 -4621 192 77 0 0 chr5 11456010 11456036 -188174114 + (GCTG)n Simple_repeat Simple_repeat 1 26 0 560 293 153 58 chr5 11456036 11456503 -188173647 + ERVL LTR ERVL 1143 1707 -4057 289 187 220 0 chr5 11456687 11456778 -188173372 - L2 LINE L2 -1 3312 3202 329 319 11 0 chr5 11456810 11456904 -188173246 + L2 LINE L2 3216 3310 -3 432 230 67 67 chr5 11457087 11457252 -188172898 - MER5A DNA MER1_type 0 189 25 345 299 45 6 chr5 11459645 11459802 -188170348 - L1MCc LINE L1 -4593 2529 2367 785 126 8 8 chr5 11459811 11459972 -188170178 - AluY SINE Alu 0 311 180 383 300 136 36 chr5 11459977 11460601 -188169549 - L1MCc LINE L1 -4761 2361 1429 1732 260 33 18 chr5 11460601 11461058 -188169092 + LTR40c LTR ERVL 1 464 -1 383 300 136 36 chr5 11461058 11461223 -188168927 - L1MCc LINE L1 -5693 1429 1282 2205 118 3 10 chr5 11461286 11461599 -188168551 - AluSx SINE Alu 0 312 2 377 247 0 0 chr5 11462504 11462589 -188167561 - MLT1E LTR MaLR -1 653 569 1519 247 112 34 chr5 11462728 11463193 -188166957 - MLT1E LTR MaLR -90 503 3 338 342 128 53 chr5 11463213 11463661 -188166489 + L2 LINE L2 2725 3207 -65 1137 140 8 103 chr5 11464003 11464246 -188165904 + MLT1A2 LTR MaLR 1 220 -154 1150 256 92 19 chr5 11466427 11466841 -188163309 - LTR16A1 LTR ERVL 0 457 14 1173 158 5 26 chr5 11466855 11467045 -188163105 + MER5A DNA MER1_type 1 186 -3 318 294 76 34 chr5 11467255 11467374 -188162776 - MIR3 SINE MIR -2 206 83 1399 165 15 4 chr5 11467446 11467706 -188162444 + L1MA7 LINE L1 6020 6282 -9 27 0 0 0 chr5 11467735 11467762 -188162388 + AT_rich Low_complexity Low_complexity 1 27 0 501 309 124 0 chr5 11468339 11468533 -188161617 - MIR SINE MIR -36 226 9 24 0 0 0 chr5 11471821 11471845 -188158305 + AT_rich Low_complexity Low_complexity 1 24 0 2060 168 25 98 chr5 11472118 11472606 -188157544 - MER66A LTR ERV1 0 478 27 2695 166 17 23 chr5 11472952 11473422 -188156728 - MLT1C LTR MaLR 0 467 1 340 196 0 150 chr5 11473847 11473975 -188156175 - MER105 DNA DNA -42 162 59 4883 165 10 33 chr5 11473975 11474787 -188155363 + MER54B LTR ERVL 1 793 0 340 196 0 150 chr5 11474787 11474811 -188155339 - MER105 DNA DNA -145 59 33 259 293 55 22 chr5 11475599 11475780 -188154370 + L1MEd LINE L1 595 781 -5338 3353 155 11 33 chr5 11475784 11476418 -188153732 + L1MA4 LINE L1 5666 6285 -15 1017 125 46 0 chr5 11476419 11476571 -188153579 + L1PA11 LINE L1 6016 6174 0 2108 226 97 30 chr5 11476583 11477308 -188152842 - L1M3e LINE L1 -4972 2058 1286 848 181 21 0 chr5 11477309 11477453 -188152697 - L1M3e LINE L1 -6726 304 158 486 233 23 8 chr5 11477451 11477580 -188152570 + L1ME3A LINE L1 5832 5962 -208 * 259 226 60 75 chr5 11477689 11477822 -188152328 + L1ME3A LINE L1 6031 6161 -9 751 300 123 3 chr5 11479577 11479894 -188150256 - LTR16B LTR ERVL -90 374 20 225 0 0 0 chr5 11480016 11480041 -188150109 + (T)n Simple_repeat Simple_repeat 1 25 0 362 258 156 21 chr5 11480062 11480248 -188149902 + MER102b DNA MER1_type 55 265 -76 289 336 0 8 chr5 11480347 11480469 -188149681 + L2 LINE L2 3188 3308 -5 1679 168 0 38 chr5 11481586 11481901 -188148249 - AluJo SINE Alu -9 303 1 2168 87 20 13 chr5 11482251 11482551 -188147599 - AluY SINE Alu -9 302 1 2008 128 3 20 chr5 11483332 11483636 -188146514 + AluSx SINE Alu 1 299 -13 382 296 32 26 chr5 11484081 11484270 -188145880 - L2 LINE L2 -614 2700 2511 572 289 80 56 chr5 11484435 11485398 -188144752 - L1MDa LINE L1 -4512 1703 835 2473 215 18 28 chr5 11486078 11486261 -188143889 + MER68 LTR ERV1 54 237 -325 2463 131 8 3 chr5 11486261 11486621 -188143529 - THE1B LTR MaLR 0 364 3 10406 105 38 35 chr5 11486623 11488199 -188141951 - THE1B-int LTR MaLR 0 1580 1 2448 109 31 14 chr5 11488199 11488557 -188141593 - THE1B LTR MaLR 0 364 1 2473 215 18 28 chr5 11488557 11488872 -188141278 + MER68 LTR ERV1 236 551 -11 292 327 186 10 chr5 11488993 11489299 -188140851 + L2 LINE L2 1950 2309 -1005 280 286 65 0 chr5 11489502 11489579 -188140571 - L2 LINE L2 -5 3308 3227 414 284 15 55 chr5 11491925 11492126 -188138024 - MIR SINE MIR 0 262 70 365 268 5 15 chr5 11492537 11492573 -188137577 + GA-rich Low_complexity Low_complexity 1 36 -455 2077 127 3 10 chr5 11492573 11492873 -188137277 + AluSx SINE Alu 2 299 -13 365 268 5 15 chr5 11492873 11493033 -188137117 + GA-rich Low_complexity Low_complexity 36 491 0 23 0 0 0 chr5 11493591 11493614 -188136536 + AT_rich Low_complexity Low_complexity 1 23 0 268 195 8 154 chr5 11494156 11494279 -188135871 - MER102b DNA MER1_type -4 337 233 29 0 0 0 chr5 11495585 11495614 -188134536 + AT_rich Low_complexity Low_complexity 1 29 0 554 335 23 23 chr5 11497793 11498050 -188132100 + MLT2F LTR ERVL 17 273 -390 1041 196 47 17 chr5 11498054 11498289 -188131861 - MER96B DNA MER1_type? 0 417 176 841 266 64 53 chr5 11498305 11498666 -188131484 + MLT2F LTR ERVL 280 644 -19 908 201 54 10 chr5 11499471 11499675 -188130475 - MER20 DNA MER1_type 0 219 7 1244 204 4 4 chr5 11499876 11500106 -188130044 + L1P3 LINE L1 700 929 -4946 6936 114 17 39 chr5 11500127 11501332 -188128818 + L1PA10 LINE L1 4277 5441 -727 2026 132 7 3 chr5 11501332 11501619 -188128531 + AluSx SINE Alu 1 288 -24 6936 114 17 39 chr5 11501619 11501849 -188128301 + L1PA10 LINE L1 5441 5674 -494 3613 105 20 0 chr5 11501871 11502377 -188127773 + L1PA10 LINE L1 5652 6167 -1 486 260 133 17 chr5 11502599 11502780 -188127370 - MLT1H LTR MaLR -2 547 346 1455 203 14 89 chr5 11502829 11503180 -188126970 - MSTD LTR MaLR 0 396 81 2341 97 3 0 chr5 11503180 11503480 -188126670 + AluY SINE Alu 1 301 -10 1455 203 14 89 chr5 11503480 11503556 -188126594 - MSTD LTR MaLR -315 81 1 777 265 142 0 chr5 11503967 11504186 -188125964 - MIR SINE MIR -7 255 6 26 0 0 0 chr5 11504220 11504246 -188125904 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr5 11504799 11504829 -188125321 + AT_rich Low_complexity Low_complexity 1 30 0 2194 117 3 3 chr5 11505016 11505316 -188124834 - AluSx SINE Alu -11 301 2 2103 122 13 7 chr5 11505317 11505620 -188124530 - AluSx SINE Alu -7 305 1 1107 103 7 0 chr5 11505718 11505873 -188124277 + L1PA15 LINE L1 6002 6157 -8 460 230 121 40 chr5 11505962 11506136 -188124014 - L1ME LINE L1 -470 5700 5513 290 239 229 0 chr5 11506639 11506748 -188123402 - L2 LINE L2 -17 3255 3122 459 301 99 6 chr5 11508130 11508435 -188121715 + L1ME LINE L1 125 465 -5605 236 336 93 25 chr5 11508791 11509199 -188120951 - L2 LINE L2 -835 2479 2044 405 305 64 0 chr5 11509954 11510095 -188120055 + Charlie1 DNA MER1_type 1 150 -2611 * 1426 184 127 31 chr5 11510088 11510473 -188119677 + Charlie1 DNA MER1_type 2282 2703 -58 367 291 28 50 chr5 11511426 11511605 -188118545 + MER5B DNA MER1_type 1 175 -3 718 91 83 0 chr5 11562458 11562579 -188067571 + L1MA5 LINE L1 6160 6290 -10 3417 46 10 0 chr5 11562725 11563140 -188067010 + L1PA5 LINE L1 5734 6152 -2 1831 154 59 0 chr5 11563150 11563436 -188066714 + AluJb SINE Alu 1 303 -9 2358 100 0 6 chr5 11563610 11563921 -188066229 - AluSg SINE Alu -1 309 1 598 258 45 25 chr5 11563997 11564361 -188065789 - L1ME LINE L1 -743 5403 5107 1163 219 120 69 chr5 11564383 11564849 -188065301 + MLT1D LTR MaLR 12 501 -4 243 254 99 28 chr5 11564882 11565024 -188065126 - L1ME LINE L1 -1092 5054 4903 2196 98 6 19 chr5 11565087 11565403 -188064747 + AluSp SINE Alu 1 312 -1 3325 121 2 34 chr5 11565428 11565955 -188064195 + L1PB1 LINE L1 5634 6143 -8 395 322 26 26 chr5 11566457 11566687 -188063463 - L1ME LINE L1 -1461 4685 4456 5242 158 14 5 chr5 11566706 11567602 -188062548 - L1MC1 LINE L1 0 6333 5429 536 260 75 78 chr5 11567739 11568124 -188062026 - MLT1J LTR MaLR -92 419 36 2504 66 0 28 chr5 11568130 11568450 -188061700 + AluY SINE Alu 1 311 0 1453 320 57 26 chr5 11568522 11570185 -188059965 - L1ME LINE L1 -1706 4440 2676 1532 234 122 22 chr5 11570274 11570726 -188059424 - MLT1D LTR MaLR -8 497 1 235 302 52 17 chr5 11570788 11570960 -188059190 - L1ME LINE L1 -3664 2482 2305 2635 48 0 10 chr5 11571566 11571879 -188058271 + AluY SINE Alu 1 310 -1 716 149 0 16 chr5 11573223 11573344 -188056806 + FLAM_C SINE Alu 2 120 -23 584 27 14 0 chr5 11573344 11573418 -188056732 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1455 196 82 12 chr5 11573530 11573871 -188056279 + MLT1A1 LTR MaLR 1 365 0 204 273 140 7 chr5 11574210 11574353 -188055797 - L2 LINE L2 -10 3262 3101 393 205 158 0 chr5 11574781 11574908 -188055242 - MER5C DNA MER1_type -4 320 174 2336 159 12 59 chr5 11574908 11575778 -188054372 + L1MA4A LINE L1 5186 5929 -226 759 177 64 14 chr5 11575778 11575919 -188054231 + THE1C LTR MaLR 1 148 -227 2453 47 14 10 chr5 11576047 11576343 -188053807 + AluY SINE Alu 1 297 -14 2902 138 39 55 chr5 11576789 11576944 -188053206 - L1MA9 LINE L1 -1 6311 6155 180 97 0 0 chr5 11576944 11576975 -188053175 + (TG)n Simple_repeat Simple_repeat 1 31 0 2902 138 39 55 chr5 11576975 11577355 -188052795 - L1MA9 LINE L1 -157 6155 5784 2125 123 0 0 chr5 11577355 11577648 -188052502 - AluSx SINE Alu -19 293 1 2902 138 39 55 chr5 11577648 11577707 -188052443 - L1MA9 LINE L1 -528 5784 5726 647 258 45 10 chr5 11579144 11579342 -188050808 - MIR SINE MIR -57 205 1 404 289 36 36 chr5 11579829 11579995 -188050155 + MIR SINE MIR 65 230 -32 1949 187 52 9 chr5 11580358 11580706 -188049444 - MLT1A1 LTR MaLR -2 363 1 309 239 188 0 chr5 11582299 11582416 -188047734 - MLT1J2 LTR MaLR -245 205 67 240 35 0 0 chr5 11583446 11583475 -188046675 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 221 332 81 58 chr5 11585356 11585823 -188044327 + L2 LINE L2 2820 3297 -16 673 240 91 13 chr5 11585908 11586062 -188044088 - MER20 DNA MER1_type -1 218 53 31 0 0 0 chr5 11586808 11586839 -188043311 + AT_rich Low_complexity Low_complexity 1 31 0 307 300 46 31 chr5 11587075 11587205 -188042945 + MIR SINE MIR 17 148 -60 2017 119 9 35 chr5 11587209 11587528 -188042622 + AluJo SINE Alu 1 311 -1 2320 16 0 0 chr5 11587891 11588146 -188042004 - L1P1 LINE L1 -432 5723 5469 871 50 0 0 chr5 11588146 11588245 -188041905 + L1PA3 LINE L1 6052 6152 -3 247 252 86 28 chr5 11588546 11588683 -188041467 - LTR33A LTR ERVL -3 520 403 546 286 49 35 chr5 11589515 11589718 -188040432 + MIR SINE MIR 16 221 -41 2462 147 24 31 chr5 11589727 11590142 -188040008 - MLT2D LTR ERVL 0 414 3 321 293 40 0 chr5 11591977 11592076 -188038074 + MIR SINE MIR 43 145 -63 681 233 223 40 chr5 11592076 11592449 -188037701 + MLT1H LTR MaLR 2 442 -107 263 258 0 21 chr5 11592594 11592687 -188037463 + L1MC4 LINE L1 6614 6704 -1338 224 189 38 38 chr5 11594141 11594194 -188035956 - MER5A DNA MER1_type 0 189 137 240 214 87 48 chr5 11594212 11594315 -188035835 - L1MC4 LINE L1 -1340 6702 6596 327 258 52 0 chr5 11595063 11595160 -188034990 - L2 LINE L2 -7 3265 3164 327 349 95 11 chr5 11595316 11595580 -188034570 - L1MC4 LINE L1 -2228 5580 5295 609 296 139 18 chr5 11595706 11595980 -188034170 + MLT1I LTR MaLR 75 381 -28 372 250 62 8 chr5 11596564 11596622 -188033528 + HAL1 LINE L1 2289 2342 -165 3402 188 18 38 chr5 11596622 11597011 -188033139 - MLT1E1 LTR MaLR 0 654 282 2255 117 0 0 chr5 11597011 11597309 -188032841 - AluSx SINE Alu -9 303 6 3402 188 18 38 chr5 11597309 11597584 -188032566 - MLT1E1 LTR MaLR -372 282 3 372 250 62 8 chr5 11597584 11597653 -188032497 + HAL1 LINE L1 2342 2423 -84 1696 201 13 87 chr5 11598160 11598632 -188031518 + MLT1D LTR MaLR 61 497 -8 423 256 64 60 chr5 11598672 11598906 -188031244 + HAL1b LINE L1 336 570 -778 659 329 57 57 chr5 11598994 11599416 -188030734 - L2 LINE L2 0 3313 2892 901 256 107 8 chr5 11599428 11599690 -188030460 - MLT1G1 LTR MaLR -307 288 1 826 254 89 44 chr5 11599876 11600214 -188029936 - MLT1H LTR MaLR -7 542 190 746 295 82 63 chr5 11600525 11600745 -188029405 + L1M4 LINE L1 2740 2954 -3192 900 224 50 36 chr5 11600745 11600964 -188029186 - MER58A DNA MER1_type -1 223 2 746 295 82 63 chr5 11600964 11601452 -188028698 + L1M4 LINE L1 2954 3461 -2685 4438 114 48 0 chr5 11601494 11602141 -188028009 + L1PA7 LINE L1 10 687 -5774 20464 89 22 2 chr5 11602142 11605648 -188024502 + L1PA7 LINE L1 2917 6464 -5 436 278 81 45 chr5 11605682 11605905 -188024245 - MIR SINE MIR -3 259 29 328 298 102 15 chr5 11606129 11606334 -188023816 + L1M4 LINE L1 3688 3910 -2236 180 0 0 0 chr5 11606847 11606867 -188023283 + (TA)n Simple_repeat Simple_repeat 2 21 0 328 290 51 54 chr5 11607848 11608124 -188022026 + HAL1b LINE L1 38 312 -1036 2380 92 0 0 chr5 11608148 11608452 -188021698 - AluY SINE Alu -7 304 1 553 269 102 19 chr5 11608573 11608896 -188021254 + HAL1b LINE L1 521 870 -478 1541 173 8 4 chr5 11609112 11609367 -188020783 - AluJb SINE Alu -22 290 35 270 0 0 0 chr5 11609369 11609399 -188020751 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 547 92 0 0 chr5 11609399 11609464 -188020686 - AluSg/x SINE Alu -30 280 216 502 271 73 53 chr5 11610845 11611092 -188019058 + L2 LINE L2 3057 3308 -5 247 299 28 35 chr5 11611254 11611367 -188018783 + L1ME4a LINE L1 5792 5905 -216 1556 216 32 118 chr5 11611367 11611936 -188018214 + MLT2B1 LTR ERVL 1 520 0 247 299 28 35 chr5 11611936 11611966 -188018184 + L1ME4a LINE L1 5905 5934 -187 4903 123 35 11 chr5 11612562 11613304 -188016846 + MER4E LTR ERV1 20 779 0 346 224 0 0 chr5 11613315 11613382 -188016768 + MLT1H LTR MaLR 481 547 -2 316 324 76 0 chr5 11613407 11613552 -188016598 + L1ME4a LINE L1 5964 6119 -2 1349 196 99 54 chr5 11617405 11617610 -188012540 - MLT1B LTR MaLR 0 390 196 2199 117 3 10 chr5 11617610 11617917 -188012233 - AluSc SINE Alu -4 305 1 1349 196 99 54 chr5 11617917 11618084 -188012066 - MLT1B LTR MaLR -194 196 1 404 194 0 11 chr5 11619134 11619227 -188010923 - MER53 DNA DNA -1 188 97 354 233 35 35 chr5 11619669 11619755 -188010395 - MIR SINE MIR -72 136 51 33 0 0 0 chr5 11619826 11619859 -188010291 + AT_rich Low_complexity Low_complexity 1 33 0 225 239 16 43 chr5 11619862 11620046 -188010104 + (TAA)n Simple_repeat Simple_repeat 1 179 0 28 0 0 0 chr5 11620046 11620074 -188010076 + AT_rich Low_complexity Low_complexity 1 28 0 210 318 16 0 chr5 11620120 11620183 -188009967 - L2 LINE L2 -2 3311 3248 621 251 29 12 chr5 11620210 11620381 -188009769 + MLT1J2 LTR MaLR 8 181 -269 2241 185 42 81 chr5 11620381 11620922 -188009228 - MLT2B1 LTR ERVL 0 520 1 406 204 65 19 chr5 11621364 11621472 -188008678 - MIR SINE MIR -32 230 118 2806 113 14 0 chr5 11621487 11621857 -188008293 - THE1C LTR MaLR 0 375 1 15762 90 12 6 chr5 11621907 11624791 -188005359 - L1PA7 LINE L1 -1 6153 3253 4523 166 159 31 chr5 11624807 11625836 -188004314 + L1P LINE L1 589 1749 -4397 1349 181 0 14 chr5 11625875 11626096 -188004054 + MER20 DNA MER1_type 1 218 -1 2660 172 14 2 chr5 11626129 11626548 -188003602 - MSTB LTR MaLR -2 424 1 1516 301 191 43 chr5 11626571 11628096 -188002054 - L2 LINE L2 -427 2887 1137 1785 119 42 18 chr5 11628392 11628678 -188001472 - L1MC1 LINE L1 -8 6325 6033 892 250 83 70 chr5 11628758 11629214 -188000936 - MLT1C LTR MaLR 0 467 6 757 203 23 74 chr5 11629300 11629539 -188000611 + L1MA4 LINE L1 5952 6300 0 28 29 0 0 chr5 11629809 11629844 -188000306 + AT_rich Low_complexity Low_complexity 1 35 0 2120 104 22 0 chr5 11629844 11630122 -188000028 - AluSx SINE Alu -28 284 1 749 226 5 0 chr5 11630202 11630392 -187999758 - L1MA4 LINE L1 0 6300 6110 549 82 12 0 chr5 11630532 11630617 -187999533 - L1P LINE L1 -742 5426 5341 5694 91 0 0 chr5 11630617 11631319 -187998831 + L1PA10 LINE L1 5448 6152 -16 21 36 0 0 chr5 11633343 11633371 -187996779 + AT_rich Low_complexity Low_complexity 1 28 0 584 240 76 29 chr5 11633874 11634273 -187995877 + MLT1D LTR MaLR 4 615 -11 1985 204 78 21 chr5 11636104 11636516 -187993634 - MER89 LTR ERV1 -4 555 168 2381 117 0 61 chr5 11636516 11636875 -187993275 - MER1B DNA MER1_type 0 337 1 1985 204 78 21 chr5 11636875 11636906 -187993244 - MER89 LTR ERV1 -391 168 140 2307 110 59 31 chr5 11636906 11637260 -187992890 + THE1B LTR MaLR 1 364 0 1985 204 78 21 chr5 11637260 11637339 -187992811 - MER89 LTR ERV1 -419 140 2 1406 216 76 38 chr5 11637428 11637873 -187992277 + MLT1C LTR MaLR 6 467 0 28 48 0 0 chr5 11638590 11638632 -187991518 + AT_rich Low_complexity Low_complexity 1 42 0 446 245 73 81 chr5 11639126 11639307 -187990843 + L1ME4a LINE L1 5564 5745 -376 3973 107 58 2 chr5 11639307 11639876 -187990274 + LTR43 LTR ERV1 1 601 -1 446 245 73 81 chr5 11639876 11640003 -187990147 + L1ME4a LINE L1 5745 5871 -250 2588 180 19 41 chr5 11640003 11640519 -187989631 - MLT1D LTR MaLR 0 505 1 446 245 73 81 chr5 11640519 11640593 -187989557 + L1ME4a LINE L1 5871 5944 -177 413 197 26 0 chr5 11640602 11640678 -187989472 - MER21B LTR ERV1 -769 94 17 507 313 129 41 chr5 11640969 11641686 -187988464 - L2 LINE L2 0 3313 2544 238 240 27 53 chr5 11643323 11643398 -187986752 - L3 LINE CR1 -903 674 602 734 200 23 9 chr5 11643738 11643993 -187986157 + MLT2D LTR ERVL 1 220 -194 259 137 0 39 chr5 11643996 11644047 -187986103 + MLT2D LTR ERVL 416 464 0 1373 142 9 108 chr5 11645519 11645835 -187984315 + MLT1B LTR MaLR 1 285 -105 1785 233 97 61 chr5 11645836 11646536 -187983614 - MER50 LTR ERV1 0 734 10 650 188 8 0 chr5 11646533 11646650 -187983500 + MLT1B LTR MaLR 350 467 0 * 7445 54 9 0 chr5 11647111 11648395 -187981755 - L1PA7 LINE L1 -2 6152 4854 4257 151 15 34 chr5 11648685 11649370 -187980780 + LTR8A LTR ERV1 1 672 -55 1920 162 58 36 chr5 11649370 11649735 -187980415 - THE1C LTR MaLR -2 373 1 4257 151 15 34 chr5 11649735 11649790 -187980360 + LTR8A LTR ERV1 672 727 0 2068 182 63 40 chr5 11653155 11653599 -187976551 - MLT1C LTR MaLR -5 462 9 783 236 28 6 chr5 11653862 11654040 -187976110 - MER5A DNA MER1_type -4 185 4 1062 211 124 60 chr5 11654153 11654588 -187975562 + MLT1C LTR MaLR 5 467 0 12323 165 34 43 chr5 11654592 11658051 -187972099 + L1PB1 LINE L1 2367 5792 -510 288 182 73 0 chr5 11658302 11658357 -187971793 + MLT1K LTR MaLR 530 588 0 333 0 0 0 chr5 11658498 11658535 -187971615 + (TG)n Simple_repeat Simple_repeat 2 38 0 2302 153 135 7 chr5 11659287 11659738 -187970412 - MLT2B1 LTR ERVL -11 509 1 2524 107 14 3 chr5 11659842 11660188 -187969962 + L1PB1 LINE L1 5799 6148 -3 1964 131 67 64 chr5 11661620 11661994 -187968156 - THE1C LTR MaLR 0 375 1 24 0 0 0 chr5 11662083 11662107 -187968043 + AT_rich Low_complexity Low_complexity 1 24 0 362 284 69 17 chr5 11662556 11662672 -187967478 - MIR3 SINE MIR -38 170 49 261 0 0 0 chr5 11663393 11663422 -187966728 + (TG)n Simple_repeat Simple_repeat 2 30 0 1003 238 38 61 chr5 11664924 11665319 -187964831 + L1MA9 LINE L1 5902 6287 -25 728 319 138 30 chr5 11665734 11666542 -187963608 + L2 LINE L2 2186 3311 -2 1029 172 60 60 chr5 11667016 11667249 -187962901 - MER106A DNA MER1_type -1 235 3 2997 156 4 2 chr5 11668781 11669269 -187960881 + L1MB2 LINE L1 5333 5821 -350 1998 98 56 0 chr5 11669272 11669538 -187960612 + AluSq SINE Alu 1 281 -32 339 136 0 0 chr5 11669538 11669597 -187960553 + (GGA)n Simple_repeat Simple_repeat 3 61 0 681 137 5 13 chr5 11669597 11669717 -187960433 + L1MB2 LINE L1 5814 5933 -238 486 71 0 14 chr5 11669717 11669785 -187960365 + L1MB2 LINE L1 6096 6164 -7 681 137 5 13 chr5 11669785 11669809 -187960341 + L1MB2 LINE L1 5933 6164 -7 219 261 31 0 chr5 11669958 11670023 -187960127 + (CAGAGA)n Simple_repeat Simple_repeat 2 68 0 1089 231 33 0 chr5 11670428 11670640 -187959510 + MER20 DNA MER1_type 1 219 0 2025 171 49 38 chr5 11673522 11673971 -187956179 + Charlie4a DNA MER1_type 44 497 -11 1102 156 91 0 chr5 11674278 11674477 -187955673 - L1PA16 LINE L1 -3 6163 5947 202 346 28 28 chr5 11674584 11674691 -187955459 - MIR3 SINE MIR -32 176 70 1677 159 6 28 chr5 11674767 11675093 -187955057 - L1MA6 LINE L1 0 6300 5982 682 271 44 6 chr5 11675098 11675320 -187954830 - MIR SINE MIR -7 255 30 317 241 98 45 chr5 11675466 11675599 -187954551 + MIR SINE MIR 121 260 -2 1882 191 46 114 chr5 11676291 11677096 -187953054 - LTR8A LTR ERV1 0 727 1 35938 68 7 4 chr5 11677843 11683968 -187946182 + L1PA5 LINE L1 5 6154 0 641 167 0 0 chr5 11684596 11684710 -187945440 + L1MA8 LINE L1 6156 6269 -22 21 0 0 0 chr5 11685184 11685205 -187944945 + AT_rich Low_complexity Low_complexity 1 21 0 324 262 0 12 chr5 11685589 11685673 -187944477 - Charlie7 DNA MER1_type 0 2612 2530 1174 283 68 14 chr5 11685680 11686107 -187944043 + LTR16A LTR ERVL 1 450 0 862 228 34 15 chr5 11686257 11686463 -187943687 - MLT1A1 LTR MaLR 0 365 156 1155 140 4 72 chr5 11687190 11687426 -187942724 + L1PA13 LINE L1 1532 1751 -5036 1307 129 143 34 chr5 11687426 11687613 -187942537 - MSTA LTR MaLR 0 428 263 186 43 0 0 chr5 11687613 11687636 -187942514 + (GA)n Simple_repeat Simple_repeat 1 23 0 1307 129 143 34 chr5 11687636 11687772 -187942378 - MSTA LTR MaLR -165 263 1 5661 220 33 7 chr5 11687773 11689474 -187940676 + L1PA13 LINE L1 1748 3494 -3303 43047 56 4 0 chr5 11689486 11695618 -187934532 + L1PA5 LINE L1 1 6153 -1 9812 197 36 13 chr5 11695598 11697738 -187932412 + L1PA13 LINE L1 3451 5639 -1158 * 37589 93 13 10 chr5 11697836 11703952 -187926198 - L1PA6 LINE L1 -13 6141 11 1445 203 7 0 chr5 11703940 11704245 -187925905 + L1P LINE L1 4931 5237 -909 * 1578 174 18 18 chr5 11705720 11706025 -187924125 + AluJo SINE Alu 1 305 0 542 287 24 12 chr5 11706862 11707026 -187923124 + MIR SINE MIR 35 200 -62 671 220 69 0 chr5 11707029 11707188 -187922962 + MER45A DNA AcHobo 1 170 -8 6529 193 38 32 chr5 11707620 11710509 -187919641 + L1M3f LINE L1 4 2919 -3409 954 190 0 0 chr5 11710509 11710667 -187919483 + L1PB4 LINE L1 5996 6153 -3 6529 193 38 32 chr5 11710667 11711387 -187918763 + L1M3f LINE L1 2919 3633 -2695 20907 165 50 14 chr5 11711387 11718459 -187911691 - L1MA1 LINE L1 -178 7543 13 542 315 40 46 chr5 11718500 11719012 -187911138 - MER115 DNA AcHobo -28 665 54 358 305 17 0 chr5 11719804 11719922 -187910228 - MIR3 SINE MIR -7 201 82 191 308 103 26 chr5 11720154 11720271 -187909879 + MIR3 SINE MIR 13 138 -70 425 344 116 43 chr5 11720887 11721189 -187908961 + L2 LINE L2 2949 3272 0 285 251 161 39 chr5 11722692 11722922 -187907228 + MLT1I LTR MaLR 195 409 0 308 315 175 22 chr5 11723711 11724076 -187906074 + L2 LINE L2 1991 2411 -903 1377 190 61 98 chr5 11724089 11724363 -187905787 + MLT1C LTR MaLR 8 258 -209 1666 157 7 23 chr5 11724363 11724669 -187905481 + L1MA4 LINE L1 5999 6299 -1 1377 190 61 98 chr5 11724669 11724872 -187905278 + MLT1C LTR MaLR 258 467 0 229 318 77 27 chr5 11724881 11725142 -187905008 + L2 LINE L2 2437 2710 -604 322 271 79 50 chr5 11725674 11725814 -187904336 + L2 LINE L2 3103 3246 -26 3137 160 19 6 chr5 11726882 11727407 -187902743 - L1MB3 LINE L1 -1 6182 5651 188 227 15 30 chr5 11727803 11727869 -187902281 + MIR SINE MIR 185 249 -13 1435 194 100 71 chr5 11727992 11728608 -187901542 - MLT1D LTR MaLR 0 505 1 1021 165 28 6 chr5 11729558 11729734 -187900416 + MER2 DNA MER2_type 1 180 -165 * 1189 152 3 21 chr5 11729711 11730092 -187900058 + LTR32 LTR ERVL 6 471 0 400 56 19 0 chr5 11730092 11730140 -187900010 + MER2 DNA MER2_type 162 210 -135 1430 113 156 19 chr5 11730141 11730398 -187899752 - LTR18B LTR ERVL 0 614 323 870 184 24 68 chr5 11730394 11730601 -187899549 - LTR18B LTR ERVL -416 198 1 * 356 277 0 0 chr5 11730636 11730701 -187899449 + MER2 DNA MER2_type 280 344 -1 232 184 75 98 chr5 11732735 11732909 -187897241 - Charlie7 DNA MER1_type -16 2596 2427 1925 148 20 7 chr5 11733084 11733382 -187896768 + AluJb SINE Alu 2 303 -9 267 294 52 37 chr5 11733472 11733608 -187896542 - L2 LINE L2 -188 3084 2947 266 222 116 37 chr5 11733610 11733740 -187896410 - MER5A DNA MER1_type -2 176 49 794 203 88 39 chr5 11733940 11734239 -187895911 - MLT1A2 LTR MaLR -4 370 1 258 302 112 39 chr5 11734602 11734834 -187895316 + MLT1K LTR MaLR 340 588 0 2526 52 0 0 chr5 11734917 11735222 -187894928 - AluY SINE Alu -6 305 1 226 272 39 39 chr5 11735730 11735833 -187894317 + L3 LINE CR1 1474 1576 -1 283 229 72 24 chr5 11735940 11736023 -187894127 - MLT1K LTR MaLR 0 588 502 520 236 27 0 chr5 11736271 11736381 -187893769 + MER81 DNA DNA 2 114 0 1733 164 6 25 chr5 11737647 11738045 -187892105 + AluJo SINE Alu 1 392 0 4873 144 2 188 chr5 11738465 11739142 -187891008 - MSTA-int LTR MaLR -497 1083 556 1205 126 0 22 chr5 11739142 11739324 -187890826 - AluSx SINE Alu -95 217 40 4873 144 2 188 chr5 11739324 11739792 -187890358 - MSTA-int LTR MaLR -1024 556 3 2823 129 26 5 chr5 11739794 11740213 -187889937 - MSTA LTR MaLR 0 428 1 209 138 17 52 chr5 11740245 11740303 -187889847 + (TA)n Simple_repeat Simple_repeat 2 57 0 22 35 0 0 chr5 11740436 11740465 -187889685 + AT_rich Low_complexity Low_complexity 1 29 0 310 241 161 0 chr5 11740474 11740561 -187889589 + L1MEd LINE L1 4 104 -6015 1681 147 110 40 chr5 11740566 11740912 -187889238 - THE1C LTR MaLR -5 370 1 448 234 66 144 chr5 11741172 11741445 -187888705 + L1MEd LINE L1 2132 2425 -3704 1877 149 0 0 chr5 11741445 11741761 -187888389 + AluSx SINE Alu 1 316 0 448 234 66 144 chr5 11741761 11742255 -187887895 + L1MEd LINE L1 2425 2840 -3289 561 274 19 42 chr5 11743555 11743725 -187886425 + L2 LINE L2 2317 2482 -832 2047 202 44 13 chr5 11743725 11744176 -187885974 + MLT1C LTR MaLR 1 465 -2 561 274 19 42 chr5 11744176 11744220 -187885930 + L2 LINE L2 2482 2526 -788 454 280 140 51 chr5 11744258 11744651 -187885499 + L2 LINE L2 2842 3269 -44 406 251 64 29 chr5 11745156 11745315 -187884835 + L1ME LINE L1 5313 5476 -682 231 237 0 17 chr5 11745350 11745409 -187884741 + L1ME LINE L1 5543 5600 -521 2330 60 0 3 chr5 11745679 11745977 -187884173 - AluY SINE Alu -14 297 1 246 58 0 58 chr5 11748308 11748360 -187881790 + (TA)n Simple_repeat Simple_repeat 1 49 0 1321 176 46 80 chr5 11748360 11748812 -187881338 + THE1C LTR MaLR 2 428 0 2206 95 0 0 chr5 11748876 11749172 -187880978 + AluSg SINE Alu 1 296 -14 2820 176 20 20 chr5 11749311 11749869 -187880281 + MER89 LTR ERV1 1 558 -1 906 135 0 0 chr5 11750189 11750322 -187879828 + AluJb SINE Alu 1 133 -179 2217 186 42 2 chr5 11751575 11751999 -187878151 + MLT1C LTR MaLR 1 441 -26 5611 107 102 78 chr5 11752086 11753636 -187876514 + pTR5 LTR ERV1 743 2438 0 186 167 0 0 chr5 11753996 11754026 -187876124 + MER5A DNA MER1_type 1 30 -159 196 111 0 0 chr5 11754039 11754066 -187876084 + MER5A DNA MER1_type 2 28 -161 303 274 151 0 chr5 11754147 11754253 -187875897 + MER5A DNA MER1_type 67 188 -1 1108 73 0 0 chr5 11754566 11754702 -187875448 - AluSq/x SINE Alu -176 136 1 332 324 43 29 chr5 11755063 11755270 -187874880 + L1M4 LINE L1 2278 2487 -3659 588 321 82 56 chr5 11755356 11755444 -187874706 + L1M4 LINE L1 2645 2729 -3417 2429 122 55 18 chr5 11755444 11755878 -187874272 + LTR7 LTR ERV1 1 450 0 588 321 82 56 chr5 11755878 11756341 -187873809 + L1M4 LINE L1 2729 3210 -2936 440 181 96 117 chr5 11756720 11756840 -187873310 - HAL1 LINE L1 -794 1713 1597 2217 95 0 7 chr5 11756840 11757145 -187873005 - AluSg SINE Alu -7 303 1 440 181 96 117 chr5 11757145 11757212 -187872938 - HAL1 LINE L1 -910 1597 1530 206 269 0 19 chr5 11757780 11757832 -187872318 - MIR3 SINE MIR -150 58 8 279 286 0 0 chr5 11758013 11758083 -187872067 - L2 LINE L2 0 3272 3203 2998 191 50 5 chr5 11759369 11759518 -187870632 + L1MB5 LINE L1 5526 5667 -507 273 119 0 0 chr5 11759518 11759560 -187870590 + (TA)n Simple_repeat Simple_repeat 2 43 0 2998 191 50 5 chr5 11759560 11760011 -187870139 + L1MB5 LINE L1 5667 6153 -21 1204 213 61 94 chr5 11761347 11761825 -187868325 - MLT1C LTR MaLR 0 467 6 1389 196 28 89 chr5 11763320 11763713 -187866437 + MLT1B LTR MaLR 20 388 -2 311 283 48 62 chr5 11763905 11764050 -187866100 + L1ME LINE L1 5572 5714 -407 2141 269 60 49 chr5 11764075 11764994 -187865156 - L1MC4 LINE L1 -1 8041 7113 289 375 15 0 chr5 11765087 11765223 -187864927 + ERVL LTR ERVL 2890 3027 -2627 1832 158 59 24 chr5 11765473 11765814 -187864336 - MLT1A1 LTR MaLR -12 353 1 337 290 97 24 chr5 11765949 11766156 -187863994 + ERVL LTR ERVL 5091 5312 -452 495 267 107 40 chr5 11766446 11766660 -187863490 + LTR33 LTR ERVL 1 215 -306 183 320 0 53 chr5 11766901 11766976 -187863174 - MIR SINE MIR -146 116 46 319 331 40 6 chr5 11767202 11767377 -187862773 + LTR16C LTR ERVL 279 459 -32 312 331 31 15 chr5 11767451 11767581 -187862569 + HAL1 LINE L1 1519 1650 -857 1705 142 0 58 chr5 11767596 11767905 -187862245 + AluSx SINE Alu 1 291 -21 518 225 69 74 chr5 11767911 11768233 -187861917 + MLT1E3 LTR MaLR 1 404 -220 1560 108 38 25 chr5 11768262 11768502 -187861648 + L1PB4 LINE L1 5912 6154 -2 349 130 29 14 chr5 11768527 11768596 -187861554 + MLT1E3 LTR MaLR 555 624 0 359 280 19 9 chr5 11768605 11768712 -187861438 + HAL1 LINE L1 1659 1766 -741 221 83 28 0 chr5 11769080 11769116 -187861034 + (GA)n Simple_repeat Simple_repeat 2 38 0 505 325 36 32 chr5 11769248 11769497 -187860653 + HAL1 LINE L1 2249 2498 -9 208 206 0 0 chr5 11769518 11769552 -187860598 + polypurine Low_complexity Low_complexity 3 36 0 249 331 8 31 chr5 11770176 11770306 -187859844 - MIR SINE MIR -50 212 86 1064 260 107 17 chr5 11770324 11770670 -187859480 - MLT1E2 LTR MaLR -249 377 1 222 37 0 0 chr5 11771440 11771467 -187858683 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2063 94 4 0 chr5 11771473 11771749 -187858401 - AluSp SINE Alu -36 277 1 1567 258 132 25 chr5 11771757 11772281 -187857869 - MLT1G1 LTR MaLR -12 583 4 2375 154 49 2 chr5 11772410 11772819 -187857331 + MSTA LTR MaLR 1 428 0 224 242 121 0 chr5 11773921 11774012 -187856138 - MIR SINE MIR -79 183 82 2128 113 40 64 chr5 11774241 11774404 -187855746 + THE1B LTR MaLR 1 166 -198 2003 102 3 35 chr5 11774404 11774717 -187855433 - AluSq SINE Alu -10 303 1 2128 113 40 64 chr5 11774717 11774926 -187855224 + THE1B LTR MaLR 166 364 0 1645 207 264 13 chr5 11774947 11775648 -187854502 + Charlie7 DNA MER1_type 1505 2381 -231 2087 113 0 10 chr5 11775732 11776041 -187854109 + AluSx SINE Alu 1 306 -6 235 375 65 39 chr5 11776358 11776590 -187853560 + L2 LINE L2 3030 3267 -5 1963 182 39 51 chr5 11777633 11777804 -187852346 + MLT1C LTR MaLR 6 178 -289 2055 106 3 0 chr5 11777804 11778096 -187852054 + AluSx SINE Alu 1 293 -19 1963 182 39 51 chr5 11778096 11778392 -187851758 + MLT1C LTR MaLR 178 467 0 224 280 262 0 chr5 11778594 11778701 -187851449 - L2 LINE L2 -253 3060 2926 418 159 0 0 chr5 11778705 11778774 -187851376 + AluJ/FLAM SINE Alu 1 69 -243 409 231 77 101 chr5 11778776 11778984 -187851166 + AluJb SINE Alu 2 204 -98 700 175 9 0 chr5 11778986 11779100 -187851050 + FLAM_C SINE Alu 2 116 -17 1200 234 106 32 chr5 11779296 11779731 -187850419 - MLT1C LTR MaLR 0 467 1 2248 105 0 3 chr5 11831105 11831418 -187798732 + AluSx SINE Alu 1 312 0 246 156 266 0 chr5 11831966 11832030 -187798120 + L2 LINE L2 3231 3311 -2 213 253 22 88 chr5 11832531 11832622 -187797528 - MER5B DNA MER1_type -69 109 25 550 249 26 17 chr5 11832917 11833106 -187797044 + L1MC5 LINE L1 7061 7250 -728 443 188 75 30 chr5 11833245 11833378 -187796772 + L1MC5 LINE L1 7299 7437 -524 424 288 196 7 chr5 11833387 11833540 -187796610 + MER5A DNA MER1_type 8 189 0 282 223 168 29 chr5 11833558 11833832 -187796318 + L1MC5 LINE L1 7452 7763 -198 543 161 59 11 chr5 11834215 11834331 -187795819 + LTR8A LTR ERV1 1 105 -586 4580 109 14 33 chr5 11834331 11834867 -187795283 + LTR8 LTR ERV1 1 522 -169 2357 82 3 10 chr5 11834867 11835173 -187794977 + AluSp SINE Alu 1 304 -9 4580 109 14 33 chr5 11835173 11835340 -187794810 + LTR8 LTR ERV1 522 691 0 1541 104 36 0 chr5 11835530 11835750 -187794400 + AluSx SINE Alu 1 228 -84 37 0 0 0 chr5 11835750 11835787 -187794363 + AT_rich Low_complexity Low_complexity 1 37 0 500 243 99 7 chr5 11836050 11836148 -187794002 - MER5B DNA MER1_type -7 171 53 626 171 97 17 chr5 11836148 11836323 -187793827 - MER5A DNA MER1_type 0 189 1 500 243 99 7 chr5 11836323 11836376 -187793774 - MER5B DNA MER1_type -125 53 6 221 231 115 77 chr5 11837028 11837132 -187793018 + MIR3 SINE MIR 91 198 -10 298 305 90 6 chr5 11837920 11838087 -187792063 + LTR16C LTR ERVL 279 459 -32 312 331 31 15 chr5 11838161 11838291 -187791859 + HAL1 LINE L1 1519 1650 -857 1696 149 0 58 chr5 11838306 11838615 -187791535 + AluSx SINE Alu 1 291 -21 392 205 77 51 chr5 11838621 11838738 -187791412 + MLT1E2 LTR MaLR 1 120 -506 476 257 11 73 chr5 11838778 11838957 -187791193 + MLT1E2 LTR MaLR 233 400 -226 1542 113 38 25 chr5 11838986 11839226 -187790924 + L1PB4 LINE L1 5912 6154 -2 349 130 29 14 chr5 11839251 11839320 -187790830 + MLT1E2 LTR MaLR 555 624 0 359 280 19 9 chr5 11839329 11839436 -187790714 + HAL1 LINE L1 1659 1766 -741 181 81 27 27 chr5 11839804 11839841 -187790309 + (GA)n Simple_repeat Simple_repeat 2 38 0 500 329 36 32 chr5 11839973 11840222 -187789928 + HAL1 LINE L1 2249 2498 -9 208 206 0 0 chr5 11840243 11840277 -187789873 + polypurine Low_complexity Low_complexity 3 36 0 249 331 8 31 chr5 11840901 11841031 -187789119 - MIR SINE MIR -50 212 86 1085 257 107 17 chr5 11841049 11841395 -187788755 - MLT1E2 LTR MaLR -249 377 1 222 37 0 0 chr5 11842165 11842192 -187787958 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2055 94 4 0 chr5 11842198 11842474 -187787676 - AluSp SINE Alu -36 277 1 1593 254 132 25 chr5 11842482 11843006 -187787144 - MLT1G1 LTR MaLR -12 583 4 2361 157 49 2 chr5 11843135 11843544 -187786606 + MSTA LTR MaLR 1 428 0 224 242 121 0 chr5 11844647 11844738 -187785412 - MIR SINE MIR -79 183 82 2128 113 40 64 chr5 11844967 11845130 -187785020 + THE1B LTR MaLR 1 166 -198 2003 102 3 35 chr5 11845130 11845443 -187784707 - AluSq SINE Alu -10 303 1 2128 113 40 64 chr5 11845443 11845652 -187784498 + THE1B LTR MaLR 166 364 0 1645 207 264 13 chr5 11845673 11846374 -187783776 + Charlie7 DNA MER1_type 1505 2381 -231 2087 113 0 10 chr5 11846458 11846767 -187783383 + AluSx SINE Alu 1 306 -6 235 375 65 39 chr5 11847084 11847316 -187782834 + L2 LINE L2 3030 3267 -5 1956 181 38 53 chr5 11848359 11848530 -187781620 + MLT1C LTR MaLR 6 178 -289 2101 100 3 0 chr5 11848530 11848821 -187781329 + AluSx SINE Alu 1 292 -20 1956 181 38 53 chr5 11848821 11849118 -187781032 + MLT1C LTR MaLR 178 467 0 224 280 262 0 chr5 11849320 11849427 -187780723 - L2 LINE L2 -253 3060 2926 418 159 0 0 chr5 11849431 11849500 -187780650 + AluJ/FLAM SINE Alu 1 69 -243 405 191 0 0 chr5 11849502 11849570 -187780580 + AluJ/FLAM SINE Alu 2 69 -233 700 175 9 0 chr5 11849572 11849686 -187780464 + FLAM_C SINE Alu 2 116 -17 1181 237 106 32 chr5 11849882 11850317 -187779833 - MLT1C LTR MaLR 0 467 1 1506 216 35 37 chr5 11851582 11851957 -187778193 + MLT1A2 LTR MaLR 1 374 0 705 91 83 0 chr5 11852407 11852528 -187777622 + L1MA5 LINE L1 6160 6290 -10 3377 51 10 0 chr5 11852674 11853089 -187777061 + L1PA5 LINE L1 5734 6152 -2 1739 155 58 0 chr5 11853099 11853390 -187776760 + AluJb SINE Alu 1 308 -4 277 319 89 27 chr5 11853475 11853732 -187776418 - L1MC4a LINE L1 -1878 5930 5658 2240 99 0 6 chr5 11853746 11854058 -187776092 - AluSg SINE Alu 0 310 1 576 258 45 25 chr5 11854134 11854498 -187775652 - L1MC4a LINE L1 -743 5403 5107 1186 219 120 69 chr5 11854520 11854986 -187775164 + MLT1D LTR MaLR 12 501 -4 232 254 99 28 chr5 11855019 11855161 -187774989 - L1MC4a LINE L1 -1092 5054 4903 284 224 0 0 chr5 11855165 11855223 -187774927 - LTR16B LTR ERVL 0 464 407 2046 101 6 19 chr5 11855224 11855540 -187774610 + AluSp SINE Alu 1 312 -1 2909 123 9 60 chr5 11855565 11856100 -187774050 + L1PB1 LINE L1 5634 6141 -10 381 339 17 17 chr5 11856697 11856927 -187773223 - L1MC4a LINE L1 -1461 4685 4456 5242 156 14 6 chr5 11856945 11857842 -187772308 - L1MC1 LINE L1 0 6333 5429 545 260 75 78 chr5 11857979 11858364 -187771786 - MLT1J LTR MaLR -92 419 36 2385 62 0 28 chr5 11858370 11858690 -187771460 + AluY SINE Alu 1 311 0 310 289 54 43 chr5 11858764 11859041 -187771109 - L1MC4a LINE L1 -1706 4440 4161 21 36 0 0 chr5 11859199 11859227 -187770923 + AT_rich Low_complexity Low_complexity 1 28 0 1306 321 52 25 chr5 11859239 11860517 -187769633 - L1MC4a LINE L1 -2158 3988 2676 1549 234 122 22 chr5 11860607 11861059 -187769091 - MLT1D LTR MaLR -8 497 1 466 325 63 5 chr5 11861087 11861293 -187768857 - L1MC4a LINE L1 -3624 2522 2305 2460 51 0 10 chr5 11861900 11862213 -187767937 + AluY SINE Alu 1 310 -1 753 141 0 16 chr5 11863556 11863677 -187766473 + FLAM_C SINE Alu 2 120 -23 548 29 14 0 chr5 11863677 11863747 -187766403 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 1442 202 82 12 chr5 11863859 11864200 -187765950 + MLT1A1 LTR MaLR 1 365 0 228 269 163 14 chr5 11864539 11864680 -187765470 - L2 LINE L2 -10 3262 3101 456 214 153 0 chr5 11865104 11865235 -187764915 - MER5C DNA MER1_type 0 324 174 1955 189 15 94 chr5 11865235 11866105 -187764045 + L1PA2 LINE L1 5186 5929 -226 * 2764 125 34 26 chr5 11865753 11866105 -187764045 + L1MA4A LINE L1 5580 5938 -365 1904 163 35 35 chr5 11866105 11866480 -187763670 + THE1C LTR MaLR 1 375 0 2764 125 34 26 chr5 11866480 11866592 -187763558 + L1MA4A LINE L1 5938 6048 -255 2795 86 23 13 chr5 11866592 11866989 -187763161 + MLT2A1 LTR ERVL 1 401 -43 259 101 13 51 chr5 11866989 11867068 -187763082 + (TA)n Simple_repeat Simple_repeat 2 77 0 256 23 0 47 chr5 11867176 11867219 -187762931 + (TA)n Simple_repeat Simple_repeat 2 42 0 1326 113 28 0 chr5 11867266 11867479 -187762671 + L1MA4 LINE L1 6064 6282 -18 628 226 44 0 chr5 11867502 11867639 -187762511 - MER5C DNA MER1_type -165 159 17 237 138 0 138 chr5 11867710 11867768 -187762382 + MER58 DNA MER1_type 208 257 -84 1344 218 85 37 chr5 11867954 11868361 -187761789 - MLT1C LTR MaLR -3 464 30 1555 171 123 50 chr5 11868361 11868453 -187761697 + MSTC LTR MaLR 1 85 -343 685 46 0 0 chr5 11868453 11868540 -187761610 + L1PA4 LINE L1 6066 6152 -3 1555 171 123 50 chr5 11868540 11868845 -187761305 + MSTC LTR MaLR 85 427 -1 395 313 148 28 chr5 11868888 11869064 -187761086 - MIR SINE MIR -17 245 49 512 323 65 40 chr5 11869105 11869306 -187760844 - MIR SINE MIR -10 252 47 466 225 230 16 chr5 11869478 11869669 -187760481 - MLT1J2 LTR MaLR -144 306 75 214 125 75 0 chr5 11869773 11869813 -187760337 + L2 LINE L2 3228 3270 -2 218 339 0 0 chr5 11869909 11869968 -187760182 - MER91B DNA MER1_type -7 183 125 570 150 53 75 chr5 11870014 11870147 -187760003 - MER91B DNA MER1_type -60 130 1 606 172 25 0 chr5 11871024 11871146 -187759004 - L1MC1 LINE L1 -1 6332 6208 1525 160 42 17 chr5 11871172 11871459 -187758691 - AluJo SINE Alu -18 294 1 26 50 0 0 chr5 11871461 11871501 -187758649 + AT_rich Low_complexity Low_complexity 1 40 0 1256 102 0 5 chr5 11871728 11871914 -187758236 - L1PA13 LINE L1 0 6163 5979 1611 168 20 23 chr5 11874961 11875265 -187754885 + AluJb SINE Alu 1 303 -9 21 0 0 0 chr5 11875265 11875286 -187754864 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 11875521 11875551 -187754599 + AT_rich Low_complexity Low_complexity 1 30 0 1437 176 17 76 chr5 11876032 11876356 -187753794 - AluJo SINE Alu 0 307 2 318 338 53 7 chr5 11876714 11876865 -187753285 - MIR SINE MIR -11 251 94 2190 89 0 32 chr5 11877089 11877405 -187752745 + AluSc SINE Alu 4 309 0 432 249 160 22 chr5 11877485 11877666 -187752484 + MIR SINE MIR 57 262 0 25 31 0 0 chr5 11877771 11877803 -187752347 + AT_rich Low_complexity Low_complexity 1 32 0 442 146 29 19 chr5 11879400 11879503 -187750647 - MER20B DNA MER1_type 0 783 680 3714 157 21 25 chr5 11879508 11880188 -187749962 + L1MB2 LINE L1 5452 6128 -43 330 167 97 0 chr5 11880225 11880297 -187749853 - MSTD LTR MaLR -4 392 314 * 669 111 46 9 chr5 11880294 11880402 -187749748 - MSTD LTR MaLR -284 112 1 6924 228 47 38 chr5 11880402 11882121 -187748029 - MSTD-int LTR MaLR 0 1735 2 1910 196 48 5 chr5 11882125 11882503 -187747647 - MSTD LTR MaLR -2 394 1 459 254 135 36 chr5 11882507 11883061 -187747089 - MER20B DNA MER1_type -81 702 16 1720 71 4 0 chr5 11883256 11883482 -187746668 + L1PA8 LINE L1 5944 6170 -2 4278 122 9 8 chr5 11883980 11884614 -187745536 + MER41B LTR ERV1 1 635 0 250 220 20 0 chr5 11884775 11884825 -187745325 - L2 LINE L2 0 3272 3222 241 230 92 11 chr5 11886941 11887028 -187743122 + MLT1J1 LTR MaLR 345 438 -8 2395 93 0 0 chr5 11887045 11887345 -187742805 + AluSc SINE Alu 3 302 -7 1022 184 0 17 chr5 11887361 11887540 -187742610 + AluJo SINE Alu 5 180 -132 1524 205 10 7 chr5 11887712 11888005 -187742145 - AluJb SINE Alu -15 297 4 3775 65 0 7 chr5 11888015 11888479 -187741671 - L1PA13 LINE L1 0 6163 5703 317 302 42 0 chr5 11888481 11888577 -187741573 + MIR SINE MIR 88 187 -75 559 289 97 30 chr5 11888985 11889283 -187740867 + MLT1J1 LTR MaLR 125 442 -4 239 206 14 68 chr5 11889302 11889375 -187740775 + L2 LINE L2 3243 3311 -2 1557 180 170 41 chr5 11890688 11891100 -187739050 + MLT1C LTR MaLR 1 465 -2 2184 134 33 25 chr5 11891107 11891466 -187738684 - MLT1A1 LTR MaLR 0 365 4 385 178 68 0 chr5 11893794 11893867 -187736283 - MIR SINE MIR -106 156 79 30 45 0 0 chr5 11894596 11894640 -187735510 + AT_rich Low_complexity Low_complexity 1 44 0 981 184 6 0 chr5 11895325 11895488 -187734662 + MLT1A1 LTR MaLR 202 365 0 752 195 83 6 chr5 11896783 11896952 -187733198 - LTR40a LTR ERVL -314 205 24 252 276 233 0 chr5 11896972 11897088 -187733062 + HAL1 LINE L1 1504 1646 -861 1945 114 60 4 chr5 11897130 11897411 -187732739 + AluSx SINE Alu 1 297 -15 887 290 136 45 chr5 11898847 11899581 -187730569 + HAL1 LINE L1 4 804 -1703 2364 86 0 0 chr5 11899850 11900141 -187730009 + AluSg SINE Alu 2 292 -18 1218 122 87 0 chr5 11900261 11900457 -187729693 + L1MA1 LINE L1 6090 6302 0 326 254 66 8 chr5 11900625 11900747 -187729403 + HAL1 LINE L1 2030 2158 -349 619 200 38 79 chr5 11900852 11901092 -187729058 + HAL1 LINE L1 2191 2420 -87 31000 117 18 56 chr5 11901309 11907692 -187722458 + L1PA7 LINE L1 12 6148 -6 394 306 91 30 chr5 11907706 11907971 -187722179 + L1MDa LINE L1 2335 2615 -3925 2480 78 10 0 chr5 11908172 11908479 -187721671 - AluSq SINE Alu 0 313 4 1703 120 12 0 chr5 11908579 11908821 -187721329 - AluSq SINE Alu -59 254 10 5769 136 23 24 chr5 11908919 11909047 -187721103 + L1PA16 LINE L1 4873 5000 -1166 2052 127 3 0 chr5 11909047 11909356 -187720794 + AluSx SINE Alu 1 310 0 5769 136 23 24 chr5 11909356 11909372 -187720778 + L1PA16 LINE L1 5000 5015 -1151 1975 166 0 0 chr5 11909372 11909673 -187720477 + AluJb SINE Alu 1 301 -11 5769 136 23 24 chr5 11909673 11910818 -187719332 + L1PA16 LINE L1 5015 6157 -9 707 185 57 13 chr5 11911208 11911376 -187718774 - MER39 LTR ERV1 0 707 364 2636 119 8 99 chr5 11911401 11911898 -187718252 + LTR12 LTR ERV1 27 478 -236 845 194 58 51 chr5 11911898 11912344 -187717806 - MER39 LTR ERV1 -157 550 1 1897 136 51 0 chr5 11912366 11912661 -187717489 + AluSg SINE Alu 1 310 0 417 310 158 10 chr5 11912669 11912872 -187717278 + MIR SINE MIR 29 261 -1 1494 178 69 7 chr5 11913232 11913508 -187716642 + AluJo SINE Alu 1 293 -19 21 0 0 56 chr5 11913901 11913918 -187716232 + AT_rich Low_complexity Low_complexity 1 17 -17 1486 41 0 0 chr5 11913918 11914089 -187716061 + AluY SINE Alu 123 293 -18 21 0 0 56 chr5 11914089 11914107 -187716043 + AT_rich Low_complexity Low_complexity 17 34 0 1217 75 6 13 chr5 11914606 11914765 -187715385 + AluY SINE Alu 1 158 -153 443 328 63 25 chr5 11914934 11915008 -187715142 + L1MC4a LINE L1 5632 5702 -2106 2030 116 34 3 chr5 11915008 11915300 -187714850 + AluSx SINE Alu 1 301 -11 443 328 63 25 chr5 11915300 11915509 -187714641 + L1MC4a LINE L1 5702 5926 -1882 23 54 0 0 chr5 11916438 11916475 -187713675 + AT_rich Low_complexity Low_complexity 1 37 0 241 203 0 87 chr5 11916664 11916733 -187713417 + MLT1K LTR MaLR 492 554 -34 1795 169 36 109 chr5 11917010 11917094 -187713056 + MLT1C LTR MaLR 7 96 -371 1985 121 33 16 chr5 11917094 11917400 -187712750 + AluSx SINE Alu 2 312 0 1795 169 36 109 chr5 11917400 11917812 -187712338 + MLT1C LTR MaLR 96 467 0 360 0 0 0 chr5 11918319 11918359 -187711791 + (CA)n Simple_repeat Simple_repeat 1 40 0 1360 263 43 17 chr5 11919089 11919439 -187710711 - MLT1I LTR MaLR -3 406 48 1728 159 77 30 chr5 11919627 11919991 -187710159 - MLT1B LTR MaLR -2 388 8 2301 198 35 71 chr5 11920588 11921163 -187708987 + MLT2B3 LTR ERVL 1 554 0 2123 126 7 0 chr5 11921378 11921680 -187708470 + AluSx SINE Alu 7 310 -2 804 262 151 70 chr5 11922031 11922401 -187707749 - MLT1I LTR MaLR -8 401 2 1656 149 76 41 chr5 11923987 11924328 -187705822 - THE1C LTR MaLR -33 342 1 1768 120 19 0 chr5 11924400 11924659 -187705491 - AluSg1 SINE Alu -5 304 41 1052 233 165 16 chr5 11924858 11925472 -187704678 - LTR50 LTR ERVL -2 793 1 234 301 154 0 chr5 11925640 11925763 -187704387 + MIR3 SINE MIR 42 183 -25 21 0 0 0 chr5 11927297 11927318 -187702832 + AT_rich Low_complexity Low_complexity 1 21 0 206 279 0 0 chr5 11927671 11927714 -187702436 + L2 LINE L2 3268 3310 -3 1605 230 25 42 chr5 11927991 11928465 -187701685 + L1 LINE L1 3526 3991 -2155 1099 217 156 44 chr5 11928469 11928640 -187701510 + L1 LINE L1 4098 4248 -1898 1582 194 14 17 chr5 11928640 11928934 -187701216 + AluJb SINE Alu 6 298 -14 1099 217 156 44 chr5 11928934 11929172 -187700978 + L1 LINE L1 4248 4553 -1593 240 35 0 0 chr5 11929476 11929505 -187700645 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1299 208 21 4 chr5 11929507 11929747 -187700403 - AluJo SINE Alu -30 282 39 2140 83 79 0 chr5 11930815 11931105 -187699045 + AluSp SINE Alu 1 313 0 891 313 50 37 chr5 11931527 11932183 -187697967 - HAL1b LINE L1 -539 809 145 278 248 9 0 chr5 11932235 11932344 -187697806 + CT-rich Low_complexity Low_complexity 1 110 0 5331 221 37 50 chr5 11932506 11933274 -187696876 + L1MC/D LINE L1 3519 4296 -1850 1483 131 5 5 chr5 11933274 11933488 -187696662 + AluSg/x SINE Alu 84 297 -13 5331 221 37 50 chr5 11933488 11934433 -187695717 + L1MC/D LINE L1 4296 5209 -937 770 153 0 96 chr5 11934434 11934591 -187695559 + FLAM_C SINE Alu 2 143 0 1217 213 20 16 chr5 11934593 11934639 -187695511 + L1MC/D LINE L1 5198 5242 -1087 2170 102 0 39 chr5 11934639 11934944 -187695206 + AluSx SINE Alu 1 293 -19 1217 213 20 16 chr5 11934944 11935275 -187694875 + L1MC/D LINE L1 5242 5583 -746 2084 138 38 30 chr5 11935323 11935692 -187694458 + THE1C LTR MaLR 4 375 0 2105 210 56 150 chr5 11935692 11936220 -187693930 + L1ME1 LINE L1 5364 5922 -242 480 101 0 0 chr5 11936220 11936289 -187693861 + Alu SINE Alu 241 309 -1 2105 210 56 150 chr5 11936289 11936506 -187693644 + L1ME1 LINE L1 5922 6158 -6 2046 143 0 0 chr5 11937397 11937691 -187692459 + AluSx SINE Alu 1 294 -18 566 335 109 65 chr5 11938111 11938188 -187691962 + L3 LINE CR1 472 544 -1033 1550 147 45 54 chr5 11938188 11938501 -187691649 + AluJb SINE Alu 3 312 0 566 335 109 65 chr5 11938501 11939277 -187690873 + L3 LINE CR1 544 1377 -200 1799 136 24 21 chr5 11939277 11939564 -187690586 + AluJb SINE Alu 22 309 -3 566 335 109 65 chr5 11939564 11939695 -187690455 + L3 LINE CR1 1377 1501 -76 22 0 0 0 chr5 11940500 11940522 -187689628 + AT_rich Low_complexity Low_complexity 1 22 0 2411 99 0 0 chr5 11940618 11940930 -187689220 - AluSx SINE Alu 0 312 1 720 138 0 18 chr5 11941827 11941936 -187688214 + MLT1B LTR MaLR 2 108 -282 2297 110 0 7 chr5 11941939 11942249 -187687901 + AluSx SINE Alu 1 308 -4 221 167 50 0 chr5 11942250 11942310 -187687840 + (TATAA)n Simple_repeat Simple_repeat 5 67 0 565 255 66 14 chr5 11944102 11944314 -187685836 - L3 LINE CR1 -72 1505 1283 229 299 13 0 chr5 11944594 11944671 -187685479 - L3 LINE CR1 -353 1224 1147 1151 252 74 24 chr5 11945565 11945986 -187684164 - MLT1L LTR MaLR -8 607 166 311 317 84 12 chr5 11946878 11947045 -187683105 - L3 LINE CR1 -769 808 630 2278 92 63 20 chr5 11947281 11947630 -187682520 - THE1B LTR MaLR 0 364 1 12103 77 12 3 chr5 11947630 11949182 -187680968 - THE1B-int LTR MaLR 0 1580 15 1756 128 176 10 chr5 11949182 11949494 -187680656 - THE1B LTR MaLR 0 364 1 405 253 153 0 chr5 11949844 11950014 -187680136 + L2 LINE L2 3118 3313 0 202 225 0 0 chr5 11950588 11950628 -187679522 + (CATATA)n Simple_repeat Simple_repeat 5 44 0 932 96 0 8 chr5 11951746 11951871 -187678279 - FLAM_C SINE Alu -19 124 1 430 196 112 28 chr5 11951871 11952014 -187678136 + MER104 DNA Tc2 26 180 0 452 154 13 0 chr5 11952333 11952411 -187677739 - L1MC4 LINE L1 -4 8038 7960 1128 180 234 0 chr5 11952417 11952656 -187677494 - AluJb SINE Alu -17 295 1 2911 257 98 22 chr5 11952658 11953769 -187676381 - L1MC4 LINE L1 -76 7966 6771 286 285 168 0 chr5 11954460 11954836 -187675314 + L2 LINE L2 1986 2424 -890 234 158 0 0 chr5 11954845 11954883 -187675267 + tRNA-Leu-TTG tRNA tRNA 3 40 -46 356 271 191 11 chr5 11954895 11955168 -187674982 + L2 LINE L2 2415 2736 -578 313 256 120 0 chr5 11955442 11955559 -187674591 + L2 LINE L2 3182 3312 -1 1829 166 3 7 chr5 11955647 11955949 -187674201 + AluJo SINE Alu 1 301 -11 300 185 84 34 chr5 11956048 11956167 -187673983 - L2 LINE L2 0 3272 3148 2145 136 0 0 chr5 11957772 11958067 -187672083 + AluSx SINE Alu 1 295 -17 2253 105 52 47 chr5 11961114 11961476 -187668674 + THE1B LTR MaLR 1 364 0 2394 92 0 0 chr5 11961476 11961770 -187668380 - AluSg SINE Alu -16 294 1 1048 209 39 9 chr5 11961772 11962002 -187668148 + L1MB3 LINE L1 5940 6176 -7 28 0 0 0 chr5 11962009 11962037 -187668113 + AT_rich Low_complexity Low_complexity 1 28 0 2512 58 0 26 chr5 11963670 11963983 -187666167 + AluY SINE Alu 1 305 -6 527 244 142 20 chr5 11964166 11964363 -187665787 + MIR SINE MIR 3 223 -39 957 189 124 57 chr5 11964372 11964439 -187665711 - MLT1D LTR MaLR -2 503 442 2353 94 3 3 chr5 11964439 11964747 -187665403 + AluSp SINE Alu 1 308 -5 957 189 124 57 chr5 11964747 11965095 -187665055 - MLT1D LTR MaLR -63 442 1 15241 118 30 33 chr5 11965462 11966928 -187663222 - Tigger1 DNA MER2_type 0 2418 949 2314 92 24 0 chr5 11966928 11967223 -187662927 + AluSg SINE Alu 1 302 -8 15241 118 30 33 chr5 11967223 11968140 -187662010 - Tigger1 DNA MER2_type -1469 949 40 679 204 0 23 chr5 11968140 11968272 -187661878 + FLAM_A SINE Alu 4 132 -1 15241 118 30 33 chr5 11968272 11968311 -187661839 - Tigger1 DNA MER2_type -2378 40 2 2030 142 13 7 chr5 11968354 11968656 -187661494 + AluJo SINE Alu 1 304 -8 2365 106 0 3 chr5 11968865 11969177 -187660973 + AluY SINE Alu 1 311 0 1891 165 3 3 chr5 11969191 11969488 -187660662 + AluJb SINE Alu 1 297 -15 1812 178 31 43 chr5 11969634 11969874 -187660276 - L1MB8 LINE L1 -1 6177 5943 2029 117 3 43 chr5 11969874 11970198 -187659952 + AluSx SINE Alu 1 311 -1 1812 178 31 43 chr5 11970198 11970378 -187659772 - L1MB8 LINE L1 -235 5943 5762 1678 147 4 19 chr5 11971076 11971334 -187658816 - AluJo SINE Alu -25 287 34 854 120 15 0 chr5 11972278 11972411 -187657739 - FRAM SINE Alu -24 152 18 1685 117 58 21 chr5 11972709 11973000 -187657150 + AluSx SINE Alu 2 303 -9 189 200 40 0 chr5 11973032 11973082 -187657068 + MIR SINE MIR 67 118 -144 510 239 28 34 chr5 11973132 11973308 -187656842 - MIR SINE MIR -70 192 18 252 0 0 0 chr5 11973615 11973643 -187656507 + (A)n Simple_repeat Simple_repeat 1 28 0 201 290 32 0 chr5 11974789 11974851 -187655299 - L2 LINE L2 -345 2968 2905 284 185 19 0 chr5 11975786 11975840 -187654310 - MER20 DNA MER1_type -6 213 159 1303 94 11 11 chr5 11976159 11976340 -187653810 + AluSg/x SINE Alu 118 298 -12 24 0 0 0 chr5 11976630 11976654 -187653496 + AT_rich Low_complexity Low_complexity 1 24 0 1954 118 10 20 chr5 11976752 11977049 -187653101 + AluSx SINE Alu 1 294 -18 658 152 27 0 chr5 11977129 11977241 -187652909 - FLAM_A SINE Alu -8 134 20 462 177 0 0 chr5 11977396 11977475 -187652675 - MER2 DNA MER2_type -266 79 1 252 167 0 0 chr5 11977476 11977518 -187652632 - MER2 DNA MER2_type -303 42 1 193 278 133 0 chr5 11977561 11977651 -187652499 + MIR SINE MIR 113 214 -48 820 244 173 24 chr5 11978632 11979042 -187651108 + L1MC4 LINE L1 7483 7953 -89 321 188 24 71 chr5 11979162 11979247 -187650903 - L2 LINE L2 -4 3309 3229 363 224 0 0 chr5 11980146 11980204 -187649946 + AluJ/FLAM SINE Alu 1 58 -244 230 190 0 17 chr5 11980379 11980437 -187649713 + (TA)n Simple_repeat Simple_repeat 2 58 0 2098 117 0 0 chr5 11980910 11981191 -187648959 + AluSc SINE Alu 5 285 -24 189 0 0 0 chr5 11981195 11981216 -187648934 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1902 31 0 0 chr5 11981336 11981561 -187648589 - L1PA4 LINE L1 -1 6154 5930 228 100 0 0 chr5 11981685 11981725 -187648425 + (TTTTTG)n Simple_repeat Simple_repeat 5 44 0 234 0 0 0 chr5 11982470 11982496 -187647654 + (CA)n Simple_repeat Simple_repeat 2 27 0 775 201 24 6 chr5 11983366 11983530 -187646620 + FRAM SINE Alu 2 168 -8 2620 115 5 3 chr5 11983590 11983974 -187646176 - L1PA10 LINE L1 -15 6153 5769 655 240 84 24 chr5 11983983 11984213 -187645937 - L1MC4 LINE L1 -1020 7022 6689 2527 39 0 36 chr5 11984905 11985240 -187644910 - L1PA3 LINE L1 0 6155 5833 6793 62 26 2 chr5 11985400 11987024 -187643126 + L1PA8 LINE L1 4509 6166 -6 203 273 18 18 chr5 11987115 11987170 -187642980 + L2 LINE L2 3259 3313 0 407 169 0 0 chr5 11987395 11987460 -187642690 + MER89 LTR ERV1 7 71 -488 1581 223 29 14 chr5 11987464 11987818 -187642332 + MER89 LTR ERV1 181 539 -20 743 216 30 10 chr5 11987820 11988019 -187642131 + MLT1A1 LTR MaLR 1 203 -162 810 315 108 11 chr5 11988398 11988517 -187641633 - L2 LINE L2 -4 3309 3203 2520 197 14 18 chr5 11988517 11989024 -187641126 + MLT1D LTR MaLR 1 505 0 810 315 108 11 chr5 11989024 11989358 -187640792 - L2 LINE L2 -110 3203 2812 447 302 17 22 chr5 11989367 11989546 -187640604 - MER5B DNA MER1_type 0 178 1 403 338 45 13 chr5 11989546 11989573 -187640577 - L2 LINE L2 -503 2811 2787 198 0 0 0 chr5 11989573 11989595 -187640555 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 403 338 45 13 chr5 11989595 11989710 -187640440 - L2 LINE L2 -527 2787 2664 365 304 98 47 chr5 11989711 11989925 -187640225 - L2 LINE L2 -1098 2216 1992 956 309 53 25 chr5 11989953 11990351 -187639799 - LTR16A LTR ERVL -7 443 35 226 207 0 107 chr5 11990914 11991064 -187639086 + A-rich Low_complexity Low_complexity 3 136 0 2972 271 96 26 chr5 11991225 11993694 -187636456 + L1MC/D LINE L1 2675 5361 -881 234 0 0 0 chr5 11993694 11993720 -187636430 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2972 271 96 26 chr5 11993720 11993987 -187636163 + L1MC/D LINE L1 5361 5608 -634 1645 180 9 27 chr5 11994150 11994483 -187635667 - L1 LINE L1 -1977 4169 3843 1831 128 3 48 chr5 11994859 11995149 -187635001 - AluSx SINE Alu -35 277 1 24 67 0 0 chr5 11995197 11995242 -187634908 + AT_rich Low_complexity Low_complexity 1 45 0 10475 173 17 10 chr5 11995525 11997603 -187632547 + L1P LINE L1 1550 3642 -2504 3106 161 15 22 chr5 11997703 11998299 -187631851 + MER39B LTR ERV1 57 648 -5 449 325 65 50 chr5 11998948 11999220 -187630930 + MLT1K LTR MaLR 7 286 -302 1962 154 103 10 chr5 11999220 11999610 -187630540 + MSTA LTR MaLR 1 426 -2 449 325 65 50 chr5 11999610 11999660 -187630490 + MLT1K LTR MaLR 286 334 -254 401 330 135 0 chr5 11999716 11999903 -187630247 - MIR SINE MIR -13 249 40 648 319 63 77 chr5 12000226 12001002 -187629148 + L2 LINE L2 2399 3185 -128 750 82 0 0 chr5 12001397 12001494 -187628656 + L1PA10 LINE L1 6056 6152 -16 633 178 0 0 chr5 12001568 12001675 -187628475 + 7SLRNA srpRNA srpRNA 213 319 -1 21 36 0 0 chr5 12001749 12001777 -187628373 + AT_rich Low_complexity Low_complexity 1 28 0 362 301 44 56 chr5 12002928 12003159 -187626991 - MIR SINE MIR 0 262 36 1779 208 208 4 chr5 12003662 12004129 -187626021 - MLT1F1 LTR MaLR -1 566 5 346 333 23 34 chr5 12004793 12004970 -187625180 + HAL1 LINE L1 1116 1290 -1217 613 332 76 4 chr5 12005353 12005591 -187624559 + MIR SINE MIR 8 262 0 1142 145 6 0 chr5 12006595 12006767 -187623383 - LTR8 LTR ERV1 -9 682 510 7509 34 6 7 chr5 12006770 12008421 -187621729 - L1PA3 LINE L1 -3 6152 4505 8443 163 7 7 chr5 12008567 12009260 -187620890 + L1PA11 LINE L1 3644 4336 -1838 2826 7 0 0 chr5 12009260 12009566 -187620584 + AluY SINE Alu 1 306 -5 8443 163 7 7 chr5 12009566 12011415 -187618735 + L1PA11 LINE L1 4335 6172 -2 228 100 0 0 chr5 12013081 12013121 -187617029 + (TA)n Simple_repeat Simple_repeat 2 41 0 192 40 0 0 chr5 12013120 12013145 -187617005 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 3357 197 65 17 chr5 12013775 12014558 -187615592 + L1MB8 LINE L1 5352 6172 -6 217 354 42 0 chr5 12014816 12014912 -187615238 + L2 LINE L2 3173 3272 0 234 91 0 0 chr5 12016122 12016155 -187613995 + (TG)n Simple_repeat Simple_repeat 1 33 0 22 35 0 0 chr5 12016494 12016523 -187613627 + AT_rich Low_complexity Low_complexity 1 29 0 605 164 98 0 chr5 12017617 12017739 -187612411 - L1MB8 LINE L1 -5 6173 6040 472 161 120 16 chr5 12017834 12018026 -187612124 - L1MB8 LINE L1 -170 6008 5797 799 188 56 64 chr5 12018625 12018859 -187611291 - MER96B DNA MER1_type? -185 232 1 814 154 19 0 chr5 12019402 12019564 -187610586 + (TAGA)n Simple_repeat Simple_repeat 4 168 0 193 303 43 99 chr5 12020343 12020505 -187609645 + L2 LINE L2 3115 3267 -5 4862 91 1 41 chr5 12020742 12021523 -187608627 + L1P LINE L1 2 751 -5395 233 219 62 0 chr5 12022309 12022373 -187607777 + L3 LINE CR1 792 859 -718 355 289 243 14 chr5 12022541 12022759 -187607391 + L3 LINE CR1 967 1234 -343 2131 49 0 0 chr5 12022817 12023063 -187607087 + AluY SINE Alu 55 300 -11 315 313 23 47 chr5 12023068 12023196 -187606954 + L3 LINE CR1 1383 1507 -70 7423 101 7 19 chr5 12024320 12025405 -187604745 + MER11C LTR ERVK 1 1071 0 254 302 16 0 chr5 12025477 12025540 -187604610 - MIR SINE MIR -104 104 41 954 187 34 10 chr5 12026622 12026831 -187603319 + MER61C LTR ERV1 216 429 -5 279 0 0 0 chr5 12026871 12026902 -187603248 + (CA)n Simple_repeat Simple_repeat 1 31 0 202 281 52 118 chr5 12027503 12027638 -187602512 - MIR3 SINE MIR -45 163 38 2256 105 13 7 chr5 12027774 12028079 -187602071 + AluSg SINE Alu 3 309 -1 326 315 124 41 chr5 12028372 12028639 -187601511 + L2 LINE L2 2929 3217 -96 620 334 128 17 chr5 12028711 12028928 -187601222 - L2 LINE L2 -25 3288 3097 1633 182 0 47 chr5 12028928 12029246 -187600904 + AluJo SINE Alu 1 303 -9 620 334 128 17 chr5 12029246 12029664 -187600486 - L2 LINE L2 -216 3097 2591 295 138 313 25 chr5 12029668 12029748 -187600402 + MER51A LTR ERV1 1 103 -531 * 2280 111 2 34 chr5 12029742 12030089 -187600061 + MER51B LTR ERV1 50 377 0 262 291 0 0 chr5 12030098 12030177 -187599973 - L2 LINE L2 -741 2573 2495 244 184 13 92 chr5 12030185 12030261 -187599889 - L1MA10 LINE L1 -552 5782 5713 2395 158 59 20 chr5 12030262 12030768 -187599382 + L1MA10 LINE L1 5806 6331 -3 1377 303 141 11 chr5 12030819 12031555 -187598595 - L2 LINE L2 -865 2449 1618 2647 124 11 49 chr5 12031770 12032215 -187597935 - MSTA LTR MaLR 0 428 1 1872 134 16 26 chr5 12035081 12035387 -187594763 + AluJb SINE Alu 3 305 -7 2128 92 0 3 chr5 12035579 12035883 -187594267 - AluY SINE Alu -8 303 1 20686 32 13 0 chr5 12036178 12039931 -187590219 - L1P LINE L1 -733 5422 1630 572 106 0 62 chr5 12039931 12040044 -187590106 - LTR8 LTR ERV1 -176 515 410 * 887 138 0 22 chr5 12040038 12040176 -187589974 - LTR8 LTR ERV1 -556 135 1 359 129 38 53 chr5 12040370 12040493 -187589657 + MER61B LTR ERV1 2 216 -209 420 141 94 0 chr5 12040610 12040695 -187589455 + LTR49 LTR ERV1 154 246 -349 458 181 96 50 chr5 12040713 12040945 -187589205 + LTR48 LTR ERV1 300 739 -48 1205 167 5 33 chr5 12041659 12041788 -187588362 + MER3 DNA MER1_type 1 123 -86 1884 115 0 0 chr5 12041788 12042032 -187588118 - AluSg SINE Alu -15 295 52 1205 167 5 33 chr5 12042032 12042117 -187588033 + MER3 DNA MER1_type 123 209 0 586 193 56 43 chr5 12042468 12042629 -187587521 + LTR23 LTR ERV1 275 437 0 333 0 0 0 chr5 12043921 12043958 -187586192 + (CA)n Simple_repeat Simple_repeat 2 38 0 288 0 0 0 chr5 12046475 12046507 -187583643 + (GA)n Simple_repeat Simple_repeat 2 33 0 1342 177 27 10 chr5 12046776 12047193 -187582957 - LTR54 LTR ERV1 0 510 1 3835 206 26 30 chr5 12047640 12049070 -187581080 + L1MA9 LINE L1 4361 5788 -524 241 191 16 48 chr5 12049093 12049156 -187580994 - L1M2 LINE L1 -512 5788 5728 2311 196 46 24 chr5 12049180 12049477 -187580673 + L1MA9 LINE L1 5776 6091 -221 1975 81 0 8 chr5 12049477 12049775 -187580375 - AluY SINE Alu 0 333 38 2311 196 46 24 chr5 12049775 12049977 -187580173 + L1MA9 LINE L1 6091 6287 -25 697 295 33 26 chr5 12050011 12050282 -187579868 + MLT1K LTR MaLR 307 579 -9 331 241 35 23 chr5 12051893 12051980 -187578170 - L2 LINE L2 -16 3297 3210 354 236 50 36 chr5 12052028 12052168 -187577982 + L1MC4 LINE L1 7900 8041 -1 2481 46 19 10 chr5 12052482 12052789 -187577361 + AluY SINE Alu 1 310 -1 207 0 0 0 chr5 12052881 12052904 -187577246 + (A)n Simple_repeat Simple_repeat 1 23 0 279 0 0 0 chr5 12053326 12053357 -187576793 + (TTA)n Simple_repeat Simple_repeat 3 33 0 306 30 0 0 chr5 12053357 12053390 -187576760 - L1PA6 LINE L1 -18 6136 6104 1457 229 66 92 chr5 12054286 12054850 -187575300 - MLT1E2 LTR MaLR -2 624 76 302 281 118 30 chr5 12054757 12054892 -187575258 - MLT2C1 LTR ERVL -199 198 52 * 225 154 0 0 chr5 12055188 12055227 -187574923 + (TA)n Simple_repeat Simple_repeat 1 39 0 2227 115 0 16 chr5 12055227 12055540 -187574610 - AluSx SINE Alu -4 308 1 497 273 32 7 chr5 12055984 12056138 -187574012 + LTR67 LTR ERVL 400 557 0 1441 179 3 102 chr5 12056496 12056820 -187573330 + AluJo SINE Alu 1 292 -20 1301 136 19 0 chr5 12056934 12057148 -187573002 + L1MA4 LINE L1 6077 6294 -6 297 0 0 0 chr5 12057351 12057384 -187572766 + (TG)n Simple_repeat Simple_repeat 1 33 0 1832 132 13 55 chr5 12057615 12057926 -187572224 - AluSq SINE Alu -14 299 2 2308 100 3 0 chr5 12057939 12058240 -187571910 - AluSc SINE Alu -7 302 1 2065 136 3 7 chr5 12058268 12058578 -187571572 - AluSg1 SINE Alu 0 309 1 235 311 41 33 chr5 12058657 12058779 -187571371 + LTR67 LTR ERVL 421 543 -14 376 295 54 27 chr5 12060355 12060504 -187569646 - MIR SINE MIR -97 165 13 2228 105 0 10 chr5 12061483 12061778 -187568372 + AluSg SINE Alu 3 294 -16 2375 75 0 31 chr5 12061780 12062101 -187568049 + AluY SINE Alu 1 311 0 369 0 0 0 chr5 12062111 12062152 -187567998 + (TG)n Simple_repeat Simple_repeat 1 41 0 216 0 0 0 chr5 12062151 12062175 -187567975 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 601 264 37 12 chr5 12062550 12062713 -187567437 - MER5A DNA MER1_type -7 182 16 317 167 56 158 chr5 12062765 12062980 -187567170 + L1M4 LINE L1 4969 5161 -985 1900 109 21 0 chr5 12062981 12063264 -187566886 - AluSq SINE Alu -15 298 10 561 193 82 7 chr5 12063565 12063700 -187566450 - Charlie4 DNA MER1_type -1812 149 5 1950 131 25 0 chr5 12064468 12064750 -187565400 + AluY SINE Alu 1 289 -22 21 36 0 0 chr5 12067063 12067091 -187563059 + AT_rich Low_complexity Low_complexity 1 28 0 1952 115 39 11 chr5 12068178 12068464 -187561686 + AluSq SINE Alu 1 294 -19 331 252 142 45 chr5 12069815 12069970 -187560180 - MIR SINE MIR -87 175 6 1361 167 123 0 chr5 12070793 12071069 -187559081 + MER2 DNA MER2_type 10 319 -26 765 222 81 0 chr5 12071475 12071660 -187558490 + Charlie1a DNA MER1_type 5 204 -1251 1615 168 28 7 chr5 12071686 12071971 -187558179 + AluJo SINE Alu 1 291 -21 1133 154 254 7 chr5 12071972 12072251 -187557899 + Charlie1a DNA MER1_type 739 1086 -369 1357 168 16 29 chr5 12072266 12072510 -187557640 + AluJo SINE Alu 1 241 -71 3801 135 49 25 chr5 12072511 12072652 -187557498 - MER50 LTR ERV1 -23 711 575 2283 101 0 7 chr5 12072652 12072960 -187557190 + AluSx SINE Alu 1 306 -6 3801 135 49 25 chr5 12072960 12073512 -187556638 - MER50 LTR ERV1 -159 575 1 412 138 0 0 chr5 12073512 12073570 -187556580 + AluJo SINE Alu 238 295 -17 1674 226 96 35 chr5 12073857 12074088 -187556062 + MLT1E2 LTR MaLR 1 216 -410 1947 131 30 0 chr5 12074088 12074386 -187555764 + AluSx SINE Alu 1 307 -5 1674 226 96 35 chr5 12074386 12074742 -187555408 + MLT1E2 LTR MaLR 216 619 -7 321 342 45 42 chr5 12074891 12074963 -187555187 + MLT1I LTR MaLR 44 114 -295 3300 122 75 62 chr5 12074963 12075432 -187554718 + MER39B LTR ERV1 5 486 -167 1717 153 30 0 chr5 12075432 12075700 -187554450 + AluJo SINE Alu 12 287 -25 3300 122 75 62 chr5 12075700 12075870 -187554280 + MER39B LTR ERV1 486 652 -1 321 342 45 42 chr5 12075870 12076110 -187554040 + MLT1I LTR MaLR 114 357 -52 1737 176 0 31 chr5 12076211 12076529 -187553621 + AluJb SINE Alu 1 308 -4 1412 171 89 0 chr5 12077003 12077261 -187552889 - MER50 LTR ERV1 -23 711 431 661 80 23 0 chr5 12077272 12077360 -187552790 - THE1C LTR MaLR -285 90 1 1725 123 31 0 chr5 12077704 12077964 -187552186 - MER50 LTR ERV1 -466 268 1 275 238 60 24 chr5 12078557 12078641 -187551509 + MLT1L LTR MaLR 527 613 -2 2944 101 0 5 chr5 12078827 12079204 -187550946 - THE1C LTR MaLR 0 375 1 954 216 96 96 chr5 12079736 12080204 -187549946 - LTR34 LTR ERV1 -4 695 136 425 180 72 18 chr5 12080282 12080393 -187549757 - MER4A LTR ERV1 -547 117 1 353 261 45 9 chr5 12080495 12080606 -187549544 + Charlie5 DNA MER1_type 34 148 -2464 2256 99 10 0 chr5 12080608 12080910 -187549240 + AluSx SINE Alu 1 305 -7 2382 185 57 41 chr5 12080916 12081269 -187548881 + Charlie5 DNA MER1_type 1975 2344 -280 2163 126 10 0 chr5 12081269 12081571 -187548579 - AluSx SINE Alu -7 305 1 2382 185 57 41 chr5 12081571 12081827 -187548323 + Charlie5 DNA MER1_type 2344 2594 -30 223 217 0 0 chr5 12082311 12082357 -187547793 - MIR SINE MIR -115 147 102 4795 161 48 9 chr5 12082361 12083223 -187546927 - MER54A LTR ERVL -6 895 1 2366 85 7 0 chr5 12083723 12084018 -187546132 - AluSx SINE Alu -15 297 1 1979 146 0 10 chr5 12084092 12084417 -187545733 - AluSx SINE Alu 0 312 1 2155 116 0 0 chr5 12084956 12085250 -187544900 - AluSx SINE Alu -18 294 1 1684 180 3 10 chr5 12085399 12085694 -187544456 - AluJo SINE Alu -19 293 1 2288 96 0 0 chr5 12086054 12086347 -187543803 + AluSx SINE Alu 1 293 -19 1901 152 13 3 chr5 12086677 12086980 -187543170 + AluJb SINE Alu 1 306 -6 2333 84 0 7 chr5 12086988 12087285 -187542865 + AluSg SINE Alu 3 297 -13 1859 113 55 4 chr5 12087672 12087946 -187542204 + AluSx SINE Alu 1 288 -24 2291 144 34 3 chr5 12088606 12088961 -187541189 + MER47A DNA MER2_type 1 366 0 1745 169 3 13 chr5 12089165 12089347 -187540803 - AluJo SINE Alu -1 311 132 2224 103 7 0 chr5 12089347 12089643 -187540507 - AluSg SINE Alu -12 298 6 1745 169 3 13 chr5 12089643 12089774 -187540376 - AluJo SINE Alu -180 132 1 2102 125 0 3 chr5 12089862 12090167 -187539983 - AluJb SINE Alu 0 312 9 246 232 295 11 chr5 12090247 12090342 -187539808 - MIR SINE MIR -55 153 32 1380 283 66 15 chr5 12091338 12091739 -187538411 + L1PB3 LINE L1 5663 6080 -74 40 17 0 17 chr5 12091851 12091881 -187538269 + AT_rich Low_complexity Low_complexity 1 31 -26 1813 107 3 75 chr5 12091881 12092200 -187537950 - AluSx SINE Alu -16 296 1 40 17 0 17 chr5 12092200 12092227 -187537923 + AT_rich Low_complexity Low_complexity 31 57 0 1412 58 48 19 chr5 12092235 12092443 -187537707 + AluSq SINE Alu 79 292 -21 377 281 57 62 chr5 12093355 12093565 -187536585 + MIR SINE MIR 11 219 -43 328 324 14 28 chr5 12093660 12093805 -187536345 + MIR SINE MIR 85 227 -35 2614 23 3 0 chr5 12095174 12095484 -187534666 + AluY SINE Alu 1 311 0 356 306 113 18 chr5 12095498 12095727 -187534423 + L1MEd LINE L1 508 758 -5361 489 174 12 0 chr5 12095856 12095942 -187534208 - HY1 scRNA scRNA -25 87 1 1370 183 36 36 chr5 12096002 12096303 -187533847 - AluJb SINE Alu -9 303 3 2252 89 7 3 chr5 12096336 12096639 -187533511 + AluSq SINE Alu 1 304 -9 488 256 84 59 chr5 12096811 12097014 -187533136 + L1MEd LINE L1 2878 3085 -3044 1743 203 15 3 chr5 12097014 12097339 -187532811 - MLT1A1 LTR MaLR -1 364 36 287 248 176 0 chr5 12097360 12097513 -187532637 + L1M4 LINE L1 4664 4843 -1303 2035 262 85 19 chr5 12097515 12098085 -187532065 - L2 LINE L2 0 3313 2782 1603 166 49 11 chr5 12098085 12098369 -187531781 + AluJo SINE Alu 1 295 -17 2035 262 85 19 chr5 12098369 12098814 -187531336 - L2 LINE L2 -531 2782 2227 233 235 0 141 chr5 12098823 12098878 -187531272 - MER82 DNA MER2_type 0 653 612 2230 97 0 3 chr5 12098878 12099177 -187530973 - AluSq SINE Alu -15 298 1 233 235 0 141 chr5 12099177 12099206 -187530944 - MER82 DNA MER2_type -41 612 581 1465 186 45 13 chr5 12099275 12099590 -187530560 + MLT1A1 LTR MaLR 1 431 -36 2061 204 37 19 chr5 12099610 12100042 -187530108 - MER82 DNA MER2_type -177 476 37 1672 118 0 0 chr5 12100080 12100318 -187529832 - AluSx SINE Alu -19 293 56 1346 262 105 62 chr5 12100348 12100718 -187529432 - L2 LINE L2 -1105 2209 1856 2057 148 0 0 chr5 12100718 12101029 -187529121 + AluSx SINE Alu 1 311 -1 1346 262 105 62 chr5 12101029 12101103 -187529047 - L2 LINE L2 -1458 1856 1787 2088 113 3 0 chr5 12101103 12101403 -187528747 + AluSq SINE Alu 1 301 -12 1346 262 105 62 chr5 12101403 12101805 -187528345 - L2 LINE L2 -1527 1787 1326 230 208 125 0 chr5 12101814 12101886 -187528264 - L2 LINE L2 -2099 1215 1135 406 225 26 89 chr5 12102227 12102418 -187527732 + L1MC5 LINE L1 7603 7781 -180 1060 88 0 0 chr5 12102424 12102561 -187527589 + AluSq/x SINE Alu 1 137 -175 915 123 43 49 chr5 12102683 12102846 -187527304 + AluJo SINE Alu 113 274 -38 290 88 62 12 chr5 12102849 12102929 -187527221 + (TTTA)n Simple_repeat Simple_repeat 1 84 0 354 184 116 5 chr5 12103472 12103637 -187526513 - MER21A LTR ERV1 -2 929 670 1641 77 4 17 chr5 12103641 12103875 -187526275 - AluSg/x SINE Alu 0 310 80 821 122 0 0 chr5 12104303 12104418 -187525732 + MER4D LTR ERV1 1 115 -788 1256 146 35 22 chr5 12104418 12104644 -187525506 + AluSx SINE Alu 1 229 -83 4345 148 31 37 chr5 12104668 12105474 -187524676 + MER4D LTR ERV1 103 903 0 323 270 27 20 chr5 12105485 12105633 -187524517 - LTR37A LTR ERV1 0 426 278 3405 169 50 72 chr5 12105659 12106131 -187524019 + MER72 LTR ERV1 15 467 -255 1586 166 0 30 chr5 12106131 12106426 -187523724 + AluJo SINE Alu 1 286 -26 3405 169 50 72 chr5 12106426 12106677 -187523473 + MER72 LTR ERV1 467 722 0 671 162 0 0 chr5 12106724 12106823 -187523327 + AluJ/FLAM SINE Alu 2 100 -212 428 190 229 45 chr5 12106838 12107017 -187523133 - LTR37A LTR ERV1 -207 219 8 2085 115 10 0 chr5 12107613 12107918 -187522232 - AluSx SINE Alu 0 312 5 528 168 84 8 chr5 12108020 12108151 -187521999 + LTR37A LTR ERV1 286 426 0 273 302 9 35 chr5 12108412 12108528 -187521622 + G-rich Low_complexity Low_complexity 3 115 0 444 259 5 53 chr5 12109904 12110093 -187520057 + GA-rich Low_complexity Low_complexity 1 180 0 873 163 7 13 chr5 12110244 12110440 -187519710 - FRAM SINE Alu 0 176 1 2179 105 0 22 chr5 12110445 12110760 -187519390 - AluSx SINE Alu -4 308 1 482 208 10 10 chr5 12110887 12110983 -187519167 - MLT2F LTR ERVL -567 96 1 1287 131 149 62 chr5 12111025 12111321 -187518829 + MLT1A1 LTR MaLR 1 332 -33 1957 121 0 0 chr5 12111321 12111637 -187518513 - AluSx SINE Alu 0 316 1 1287 131 149 62 chr5 12111637 12111675 -187518475 + MLT1A1 LTR MaLR 332 365 0 1079 134 31 76 chr5 12111880 12112103 -187518047 - AluJb SINE Alu -14 298 86 243 191 87 95 chr5 12112854 12112980 -187517170 - L1MC4 LINE L1 0 8042 7918 1110 261 105 51 chr5 12113033 12113158 -187516992 + MLT1F LTR MaLR 1 118 -424 2220 107 50 50 chr5 12113158 12113423 -187516727 - THE1B LTR MaLR 0 364 97 2125 112 0 3 chr5 12113423 12113719 -187516431 + AluSq SINE Alu 1 295 -18 2220 107 50 50 chr5 12113719 12113817 -187516333 - THE1B LTR MaLR -266 98 1 1110 261 105 51 chr5 12113817 12113893 -187516257 + MLT1F LTR MaLR 118 188 -354 201 108 0 0 chr5 12113893 12113930 -187516220 + (TG)n Simple_repeat Simple_repeat 2 38 0 1110 261 105 51 chr5 12113930 12114241 -187515909 + MLT1F LTR MaLR 188 542 0 293 248 147 8 chr5 12114253 12114382 -187515768 + MLT1F1-int LTR MaLR 4 150 -1221 840 200 36 0 chr5 12114390 12114555 -187515595 - FRAM SINE Alu -5 171 1 675 292 68 13 chr5 12114570 12114878 -187515272 + MLT1F1-int LTR MaLR 277 601 -770 287 125 0 0 chr5 12114878 12114918 -187515232 - MSTB LTR MaLR 0 428 389 1344 151 8 45 chr5 12114918 12115183 -187514967 + AluJo SINE Alu 1 255 -57 1309 179 12 4 chr5 12115192 12115438 -187514712 - AluJb SINE Alu -43 269 22 1005 136 29 73 chr5 12115446 12115652 -187514498 - MSTB LTR MaLR -229 197 1 341 341 121 0 chr5 12115891 12116064 -187514086 + MLT1F1-int LTR MaLR 692 885 -486 1566 142 0 73 chr5 12116094 12116396 -187513754 - AluJb SINE Alu -32 280 1 492 241 121 7 chr5 12116610 12116751 -187513399 + MLT1F1-int LTR MaLR 1215 1371 0 1377 211 87 30 chr5 12116855 12116894 -187513256 + MLT1F1 LTR MaLR 89 124 -443 2309 149 81 2 chr5 12116894 12117291 -187512859 + MSTC LTR MaLR 1 428 0 1377 211 87 30 chr5 12117291 12117675 -187512475 + MLT1F1 LTR MaLR 124 526 -41 1939 183 64 43 chr5 12117675 12117694 -187512456 + MER74A LTR ERVL 1 18 -540 2089 131 3 6 chr5 12117694 12118007 -187512143 - AluSx SINE Alu 0 312 1 1939 183 64 43 chr5 12118007 12118173 -187511977 + MER74A LTR ERVL 18 179 -379 1855 146 58 18 chr5 12118173 12118503 -187511647 - MER61A LTR ERV1 0 343 1 1939 183 64 43 chr5 12118503 12118754 -187511396 + MER74A LTR ERVL 179 447 -111 2287 82 0 25 chr5 12118755 12119074 -187511076 - AluSx SINE Alu 0 312 2 930 106 12 12 chr5 12119165 12119325 -187510825 + (TTCC)n Simple_repeat Simple_repeat 3 162 0 530 176 15 15 chr5 12119331 12119467 -187510683 + CT-rich Low_complexity Low_complexity 1 136 0 1747 134 12 73 chr5 12119584 12119912 -187510238 - MLT1B LTR MaLR -82 308 1 2301 72 3 0 chr5 12119992 12120285 -187509865 - AluSp SINE Alu -19 294 1 826 173 126 31 chr5 12120628 12121072 -187509078 - Charlie1 DNA MER1_type -1 2760 2186 3634 202 89 10 chr5 12121080 12122339 -187507811 + L1MB8 LINE L1 4810 6174 -4 772 181 7 34 chr5 12122337 12122486 -187507664 + L1ME LINE L1 5421 5565 -601 * 401 234 165 19 chr5 12122662 12122741 -187507409 - LTR41 LTR ERVL -592 181 115 180 0 0 0 chr5 12122741 12122761 -187507389 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 401 234 165 19 chr5 12122761 12122839 -187507311 - LTR41 LTR ERVL -658 115 1 2236 99 3 0 chr5 12123023 12123326 -187506824 - AluSq SINE Alu -9 304 1 232 244 58 35 chr5 12123328 12123414 -187506736 - LTR33A LTR ERVL -377 146 59 2110 76 32 0 chr5 12123517 12123815 -187506335 - AluSp SINE Alu 0 307 1 1616 146 84 0 chr5 12124171 12124446 -187505704 - AluSx SINE Alu -14 298 1 263 111 0 0 chr5 12124652 12124688 -187505462 + L1MC3 LINE L1 7238 7273 -512 481 95 0 0 chr5 12124692 12124755 -187505395 - LTR3b LTR ERVK 0 500 438 1894 172 49 51 chr5 12124755 12125185 -187504965 - LTR3 LTR ERVK 0 429 1 2184 160 113 15 chr5 12125185 12125215 -187504935 + L1MC3 LINE L1 7271 7297 -488 189 0 0 0 chr5 12125215 12125236 -187504914 + (ATATG)n Simple_repeat Simple_repeat 2 22 0 2184 160 113 15 chr5 12125236 12125667 -187504483 + L1MC3 LINE L1 7297 7777 -8 864 279 54 56 chr5 12126485 12126575 -187503575 - MLT1I LTR MaLR 0 409 320 1526 139 12 90 chr5 12126575 12126794 -187503356 + AluJo SINE Alu 1 189 -123 1762 135 30 20 chr5 12126794 12127097 -187503053 - AluSx SINE Alu -6 306 1 1526 139 12 90 chr5 12127097 12127200 -187502950 + AluJo SINE Alu 189 298 -14 864 279 54 56 chr5 12127200 12127517 -187502633 - MLT1I LTR MaLR -89 320 3 1789 198 72 54 chr5 12127712 12128269 -187501881 - L1ME1 LINE L1 -3 6163 5597 341 249 63 79 chr5 12128277 12128317 -187501833 - L1ME1 LINE L1 -2312 5473 5434 1789 155 3 10 chr5 12128317 12128626 -187501524 - AluJo SINE Alu -4 308 2 341 249 63 79 chr5 12128626 12128650 -187501500 - L1ME1 LINE L1 -2351 5434 5411 588 120 56 9 chr5 12128650 12128758 -187501392 - L1MB3 LINE L1 -4 6179 6067 341 249 63 79 chr5 12128758 12128881 -187501269 - L1ME1 LINE L1 -2374 5411 5288 229 189 0 38 chr5 12128931 12128984 -187501166 + L1M LINE L1 5310 5360 -804 242 280 220 38 chr5 12129432 12129564 -187500586 + MIR SINE MIR 82 237 -25 2192 99 74 42 chr5 12129564 12129917 -187500233 - THE1B LTR MaLR 0 364 1 709 252 52 0 chr5 12130088 12130243 -187499907 + AluJo SINE Alu 13 175 -137 874 202 97 11 chr5 12130861 12131128 -187499022 - Charlie1b DNA MER1_type -125 398 109 875 198 6 0 chr5 12131139 12131311 -187498839 + FRAM SINE Alu 1 173 -3 3071 155 18 26 chr5 12133201 12133809 -187496341 + pTR5 LTR ERV1 742 1344 -1094 4285 124 15 127 chr5 12133825 12134750 -187495400 + LTR12 LTR ERV1 5 826 0 793 231 61 47 chr5 12136445 12136657 -187493493 - MIR SINE MIR 0 262 48 642 177 56 90 chr5 12137364 12137630 -187492520 - L1MC5 LINE L1 -94 7867 7611 2317 63 0 20 chr5 12137687 12137986 -187492164 - AluY SINE Alu -17 294 2 24 0 0 0 chr5 12137990 12138014 -187492136 + AT_rich Low_complexity Low_complexity 1 24 0 713 188 0 0 chr5 12138014 12138131 -187492019 - FLAM_C SINE Alu -25 118 2 297 0 0 0 chr5 12138382 12138415 -187491735 + (TG)n Simple_repeat Simple_repeat 2 34 0 2100 117 0 3 chr5 12138866 12139165 -187490985 + AluSx SINE Alu 1 298 -14 240 232 14 14 chr5 12139615 12139684 -187490466 + CT-rich Low_complexity Low_complexity 1 69 0 1753 123 17 51 chr5 12139685 12139977 -187490173 - AluSx SINE Alu -30 282 1 834 193 76 0 chr5 12139977 12140148 -187490002 + MLT1F1 LTR MaLR 22 205 -362 273 156 0 0 chr5 12140175 12140220 -187489930 + MLT1F1 LTR MaLR 523 567 0 355 223 93 39 chr5 12140220 12140415 -187489735 - L1MC4a LINE L1 -394 7414 7193 3832 166 11 59 chr5 12141239 12141998 -187488152 - MER72 LTR ERV1 0 722 1 2030 117 0 37 chr5 12142026 12142325 -187487825 - AluSx SINE Alu -24 288 1 712 220 128 32 chr5 12142398 12142532 -187487618 - MLT1C LTR MaLR 0 467 303 2027 114 117 30 chr5 12142532 12142573 -187487577 - MSTA LTR MaLR 0 428 392 2265 107 0 32 chr5 12142573 12142883 -187487267 + AluSq SINE Alu 1 300 -13 2027 114 117 30 chr5 12142883 12143235 -187486915 - MSTA LTR MaLR -36 392 1 712 220 128 32 chr5 12143235 12143318 -187486832 - MLT1C LTR MaLR -164 303 229 579 200 57 14 chr5 12143346 12143486 -187486664 - MLT1C LTR MaLR -321 184 39 2035 138 7 0 chr5 12143557 12143853 -187486297 + AluSx SINE Alu 3 300 -12 1942 119 0 48 chr5 12144240 12144551 -187485599 - AluSx SINE Alu -16 296 1 819 159 0 57 chr5 12144579 12144736 -187485414 - AluJo SINE Alu -154 158 11 1995 155 3 0 chr5 12145192 12145488 -187484662 + AluJb SINE Alu 1 297 -15 564 190 129 95 chr5 12145977 12146209 -187483941 + MIR SINE MIR 10 249 -13 2104 157 11 11 chr5 12146541 12146889 -187483261 + MLT2C1 LTR ERVL 1 348 -49 1841 167 42 50 chr5 12146889 12147273 -187482877 - MLT1B LTR MaLR 0 390 10 380 128 64 0 chr5 12147281 12147375 -187482775 + (TCTG)n Simple_repeat Simple_repeat 1 100 0 251 137 0 137 chr5 12147375 12147448 -187482702 + MLT2C1 LTR ERVL 458 520 0 2327 111 0 7 chr5 12147559 12147866 -187482284 - AluSx SINE Alu -7 305 1 2439 74 0 3 chr5 12147928 12148224 -187481926 - AluY SINE Alu -16 295 1 2321 98 3 0 chr5 12148224 12148520 -187481630 - AluSx SINE Alu -15 297 1 587 162 0 0 chr5 12148615 12148720 -187481430 - FRAM SINE Alu -8 168 64 2291 110 3 3 chr5 12148817 12149127 -187481023 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr5 12149127 12149148 -187481002 + AT_rich Low_complexity Low_complexity 1 21 0 1006 229 85 98 chr5 12149154 12149283 -187480867 + L1ME1 LINE L1 5692 5821 -345 2399 88 0 28 chr5 12149283 12149602 -187480548 - AluSg SINE Alu 0 310 1 1006 229 85 98 chr5 12149602 12149921 -187480229 + L1ME1 LINE L1 5821 6134 -32 681 151 19 0 chr5 12149922 12150028 -187480122 + FLAM_C SINE Alu 2 109 -34 1719 174 0 16 chr5 12150100 12150410 -187479740 - AluJb SINE Alu 0 312 8 1666 132 4 0 chr5 12150873 12151108 -187479042 - AluSq SINE Alu -14 299 64 447 208 50 0 chr5 12151392 12151493 -187478657 - MLT1H LTR MaLR 0 549 444 * 914 223 30 47 chr5 12151475 12151785 -187478365 - MLT1H LTR MaLR -248 307 30 187 217 0 0 chr5 12152517 12152563 -187477587 + L2 LINE L2 2911 2956 -316 205 333 0 0 chr5 12153709 12153781 -187476369 + L2 LINE L2 2902 2973 -299 2237 196 52 5 chr5 12154182 12154626 -187475524 + L1MB7 LINE L1 5579 6043 -141 1968 101 7 35 chr5 12154778 12155087 -187475063 - AluY SINE Alu 0 305 5 29 47 0 0 chr5 12156206 12156249 -187473901 + AT_rich Low_complexity Low_complexity 1 43 0 2055 186 38 53 chr5 12156249 12156372 -187473778 + MLT1D LTR MaLR 1 124 -381 2133 101 10 10 chr5 12156372 12156392 -187473758 - AluSx SINE Alu -13 299 280 189 0 0 0 chr5 12156392 12156413 -187473737 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2133 101 10 10 chr5 12156413 12156690 -187473460 - AluSx SINE Alu -31 281 2 2055 186 38 53 chr5 12156690 12157071 -187473079 + MLT1D LTR MaLR 124 497 -8 963 242 54 0 chr5 12157255 12157478 -187472672 + L1MC4 LINE L1 6800 7034 -1008 1218 156 0 0 chr5 12157491 12157664 -187472486 - AluSq SINE Alu -140 173 1 2030 226 66 20 chr5 12157697 12158290 -187471860 + L1MC4 LINE L1 7043 7662 -380 292 227 93 0 chr5 12158336 12158411 -187471739 + L1MB4 LINE L1 5812 5893 -278 1201 176 146 23 chr5 12158411 12158672 -187471478 + AluSg1 SINE Alu 2 294 -15 2364 104 0 0 chr5 12158674 12158981 -187471169 + AluSx SINE Alu 3 309 -3 1425 160 73 7 chr5 12158990 12159278 -187470872 + L1MB4 LINE L1 5873 6179 -1 1203 167 26 106 chr5 12159320 12159427 -187470723 + L1MC4 LINE L1 7709 7823 -219 808 65 28 0 chr5 12159427 12159534 -187470616 + HY1 scRNA scRNA 2 111 -1 1203 167 26 106 chr5 12159534 12159547 -187470603 + L1MC4 LINE L1 7823 7835 -207 207 114 0 0 chr5 12159547 12159582 -187470568 + (TG)n Simple_repeat Simple_repeat 2 36 0 1203 167 26 106 chr5 12159582 12159598 -187470552 + L1MC4 LINE L1 7835 7851 -191 2408 99 0 0 chr5 12159598 12159901 -187470249 + AluSx SINE Alu 1 303 -9 1203 167 26 106 chr5 12159901 12160110 -187470040 + L1MC4 LINE L1 7851 8028 -14 3156 73 22 44 chr5 12160421 12160875 -187469275 + MLT2A1 LTR ERVL 1 444 0 819 235 105 17 chr5 12160970 12161264 -187468886 + L1ME3 LINE L1 5843 6162 0 1855 195 40 2 chr5 12161922 12162363 -187467787 - MER89 LTR ERV1 0 559 2 518 202 176 8 chr5 12162518 12162637 -187467513 + MER2 DNA MER2_type 206 344 -1 274 161 18 36 chr5 12163610 12163666 -187466484 - MLT1A2 LTR MaLR 0 374 320 1031 139 0 0 chr5 12163681 12163825 -187466325 - MLT1A2 LTR MaLR -227 147 4 1543 158 99 56 chr5 12164040 12164229 -187465921 + MER2 DNA MER2_type 9 219 -126 1850 132 35 17 chr5 12164229 12164517 -187465633 - AluJo SINE Alu -19 293 1 1543 158 99 56 chr5 12164517 12164650 -187465500 + MER2 DNA MER2_type 219 345 0 2021 129 3 7 chr5 12164675 12164962 -187465188 - AluSx SINE Alu -26 286 1 902 192 124 1 chr5 12165204 12165421 -187464729 - MLT1D LTR MaLR -2 503 234 416 127 0 0 chr5 12165421 12165476 -187464674 + AluSg/x SINE Alu 193 247 -62 376 244 37 80 chr5 12165735 12165851 -187464299 + L1MC4 LINE L1 7273 7392 -650 2193 101 0 52 chr5 12165851 12166179 -187463971 + AluSx SINE Alu 1 311 -1 376 244 37 80 chr5 12166179 12166551 -187463599 + L1MC4 LINE L1 7392 7744 -298 1851 170 7 0 chr5 12166647 12166941 -187463209 + AluSx SINE Alu 1 296 -16 204 129 53 53 chr5 12167092 12167263 -187462887 + (TA)n Simple_repeat Simple_repeat 2 172 0 441 99 34 70 chr5 12167372 12167727 -187462423 + (TA)n Simple_repeat Simple_repeat 1 341 0 379 130 81 2 chr5 12167778 12168188 -187461962 + (TA)n Simple_repeat Simple_repeat 1 442 0 294 215 107 50 chr5 12168197 12168318 -187461832 + L1MC4 LINE L1 7910 8037 -5 321 305 48 0 chr5 12168682 12168787 -187461363 - L2 LINE L2 -2 3311 3202 351 224 135 13 chr5 12168862 12169018 -187461132 - Charlie2 DNA MER1_type -17 2845 2671 288 0 0 0 chr5 12169131 12169163 -187460987 + (CA)n Simple_repeat Simple_repeat 1 32 0 379 371 45 0 chr5 12169219 12169397 -187460753 - L1MEd LINE L1 -5482 637 452 2027 121 24 13 chr5 12169689 12169987 -187460163 + AluSx SINE Alu 1 301 -11 745 218 175 26 chr5 12170372 12170680 -187459470 - L1MC4 LINE L1 -5 8037 7684 2340 99 0 0 chr5 12170683 12170976 -187459174 + AluSg1 SINE Alu 1 293 -16 324 0 0 0 chr5 12171155 12171191 -187458959 + (CA)n Simple_repeat Simple_repeat 2 37 0 1574 150 59 28 chr5 12171239 12171361 -187458789 + AluJb SINE Alu 1 118 -194 183 42 0 0 chr5 12171361 12171385 -187458765 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1574 150 59 28 chr5 12171385 12171548 -187458602 + AluJb SINE Alu 118 295 -17 270 268 65 89 chr5 12171725 12171971 -187458179 + MLT1K LTR MaLR 189 428 -160 204 200 0 22 chr5 12172127 12172172 -187457978 + MIR SINE MIR 219 262 0 811 165 0 122 chr5 12172631 12172819 -187457331 + FRAM SINE Alu 1 165 -1 193 93 0 47 chr5 12174029 12174072 -187456078 + (TCTCCC)n Simple_repeat Simple_repeat 3 43 0 30 77 0 0 chr5 12174392 12174457 -187455693 + GC_rich Low_complexity Low_complexity 1 65 0 379 292 99 5 chr5 12175282 12175474 -187454676 - MIR SINE MIR -52 210 1 569 280 101 5 chr5 12175912 12176130 -187454020 - MIR SINE MIR -6 256 18 572 0 15 0 chr5 12176630 12176698 -187453452 + (TTTTA)n Simple_repeat Simple_repeat 2 70 0 2140 117 0 0 chr5 12176700 12176982 -187453168 - AluSx SINE Alu -30 282 1 22 0 0 0 chr5 12176994 12177016 -187453134 + AT_rich Low_complexity Low_complexity 1 22 0 187 226 151 0 chr5 12177378 12177431 -187452719 - MIR3 SINE MIR -21 187 127 21 0 0 0 chr5 12177500 12177521 -187452629 + AT_rich Low_complexity Low_complexity 1 21 0 721 215 58 174 chr5 12178008 12178252 -187451898 - L2 LINE L2 0 3313 3042 635 39 0 0 chr5 12178252 12178330 -187451820 - AluY SINE Alu -11 298 221 721 215 58 174 chr5 12178330 12178672 -187451478 - L2 LINE L2 -271 3042 2709 1179 172 43 0 chr5 12178678 12178885 -187451265 - MER2 DNA MER2_type 0 345 130 3993 132 82 20 chr5 12178885 12179591 -187450559 + Tigger2 DNA MER2_type 1 750 -1968 272 121 176 11 chr5 12179636 12179727 -187450423 + Tigger2 DNA MER2_type 2461 2566 -152 843 167 92 17 chr5 12179779 12179953 -187450197 - Tigger2 DNA MER2_type -2526 192 6 268 163 0 0 chr5 12179953 12180002 -187450148 + MER2 DNA MER2_type 128 176 -169 * 359 112 19 149 chr5 12179983 12180008 -187450142 + Tigger2 DNA MER2_type 2532 2559 -159 2206 92 0 3 chr5 12180008 12180300 -187449850 + AluSx SINE Alu 1 291 -21 359 112 19 149 chr5 12180300 12180381 -187449769 + Tigger2 DNA MER2_type 2559 2624 -94 2510 67 0 3 chr5 12180497 12180794 -187449356 + AluY SINE Alu 2 297 -14 940 95 0 4 chr5 12182115 12182336 -187447814 + AluSg SINE Alu 2 300 -12 2120 134 3 0 chr5 12182397 12182696 -187447454 + AluSx SINE Alu 1 300 -12 373 320 114 7 chr5 12183327 12183599 -187446551 + HAL1 LINE L1 1463 1763 -744 808 224 150 72 chr5 12183834 12184348 -187445802 + L1ME3 LINE L1 4820 5368 -797 431 309 0 0 chr5 12184349 12184459 -187445691 - MER8 DNA MER2_type -127 112 3 2434 238 111 12 chr5 12184459 12185182 -187444968 + L1ME3 LINE L1 5367 6160 -2 23 33 0 0 chr5 12186510 12186540 -187443610 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 12186684 12186705 -187443445 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 12186978 12186999 -187443151 + AT_rich Low_complexity Low_complexity 1 21 0 2415 97 0 0 chr5 12187142 12187451 -187442699 - AluSx SINE Alu -3 309 1 1751 175 34 3 chr5 12187518 12187810 -187442340 - AluSx SINE Alu -11 301 1 1264 216 163 25 chr5 12188299 12188697 -187441453 - MLT1H LTR MaLR 0 549 97 2188 109 7 3 chr5 12189256 12189550 -187440600 - AluSx SINE Alu -17 295 1 1820 174 3 3 chr5 12190974 12191279 -187438871 - AluJo SINE Alu -7 305 1 270 0 0 0 chr5 12191283 12191313 -187438837 + (T)n Simple_repeat Simple_repeat 1 30 0 210 224 0 0 chr5 12191486 12191535 -187438615 + GA-rich Low_complexity Low_complexity 3 51 0 2357 54 7 0 chr5 12191808 12192103 -187438047 - AluY SINE Alu -14 297 1 1955 108 0 0 chr5 12192367 12192617 -187437533 + AluSx SINE Alu 49 298 -14 232 295 214 63 chr5 12192729 12192912 -187437238 - L2 LINE L2 -17 3296 3142 1646 165 7 65 chr5 12192912 12193221 -187436929 - AluJb SINE Alu -21 291 1 232 295 214 63 chr5 12193221 12193369 -187436781 - L2 LINE L2 -171 3142 2915 * 261 303 290 24 chr5 12193365 12193662 -187436488 + L2 LINE L2 2569 2944 -370 27 0 0 0 chr5 12193865 12193892 -187436258 + AT_rich Low_complexity Low_complexity 1 27 0 2481 67 0 0 chr5 12194646 12194945 -187435205 - AluY SINE Alu -12 299 1 23 54 0 0 chr5 12195108 12195145 -187435005 + AT_rich Low_complexity Low_complexity 1 37 0 470 261 154 0 chr5 12195470 12195658 -187434492 - MLT1L LTR MaLR -8 607 391 310 252 55 88 chr5 12195928 12196166 -187433984 - L2 LINE L2 0 3313 3084 375 237 38 23 chr5 12199063 12199194 -187430956 + Charlie7 DNA MER1_type 2477 2609 -3 272 255 54 82 chr5 12199407 12199795 -187430355 - L1MC5 LINE L1 -272 7689 7313 546 268 83 20 chr5 12200265 12200519 -187429631 - L1MC4 LINE L1 -981 7061 6792 2001 126 29 0 chr5 12203824 12204156 -187425994 - AluSx SINE Alu 0 340 1 346 333 63 0 chr5 12204250 12204361 -187425789 - L2 LINE L2 -2 3270 3153 282 377 31 13 chr5 12204766 12204925 -187425225 - MIR3 SINE MIR -5 203 42 1864 164 60 0 chr5 12205705 12206023 -187424127 + MER1B DNA MER1_type 1 337 0 1930 140 0 0 chr5 12206174 12206452 -187423698 - AluSg SINE Alu -8 302 25 40 21 0 0 chr5 12207128 12207175 -187422975 + AT_rich Low_complexity Low_complexity 1 47 0 2277 79 0 33 chr5 12207460 12207763 -187422387 + AluSp SINE Alu 1 293 -20 1924 173 0 0 chr5 12208781 12209081 -187421069 - AluJb SINE Alu -12 300 1 21 0 0 0 chr5 12209219 12209240 -187420910 + AT_rich Low_complexity Low_complexity 1 21 0 856 154 0 0 chr5 12209240 12209363 -187420787 - FLAM_C SINE Alu -20 123 1 1318 277 76 9 chr5 12209521 12210110 -187420040 - L2 LINE L2 -204 3109 2471 645 257 59 10 chr5 12210118 12210320 -187419830 - L2 LINE L2 -1338 1976 1765 309 254 83 55 chr5 12212023 12212204 -187417946 - MIR SINE MIR -6 256 71 225 229 115 21 chr5 12212352 12212448 -187417702 + MIR SINE MIR 90 194 -68 209 311 134 34 chr5 12212446 12212565 -187417585 - L2 LINE L2 -1 3312 3182 * 1715 171 10 10 chr5 12212820 12213112 -187417038 - AluJo SINE Alu -20 292 1 2161 130 37 6 chr5 12213779 12214132 -187416018 - THE1B LTR MaLR 0 364 1 917 200 15 15 chr5 12214132 12214337 -187415813 - MER3 DNA MER1_type -4 205 1 646 180 0 0 chr5 12214805 12214905 -187415245 - FRAM SINE Alu -32 144 45 754 182 0 23 chr5 12216132 12216264 -187413886 + FLAM_C SINE Alu 1 129 -14 275 244 64 13 chr5 12217034 12217112 -187413038 - MER3 DNA MER1_type -127 82 1 317 221 143 0 chr5 12217335 12217412 -187412738 - MER2 DNA MER2_type -257 88 1 1398 171 114 7 chr5 12217707 12217987 -187412163 + AluJo SINE Alu 1 310 -2 27 0 0 0 chr5 12217989 12218016 -187412134 + AT_rich Low_complexity Low_complexity 1 27 0 1927 149 0 7 chr5 12218338 12218639 -187411511 + AluJb SINE Alu 1 299 -13 1291 135 18 135 chr5 12219371 12219770 -187410380 + Tigger5 DNA MER2_type 11 2322 -1 422 262 6 90 chr5 12219770 12220004 -187410146 + L1MC4 LINE L1 7040 7252 -735 1096 243 83 98 chr5 12220006 12220587 -187409563 - MLT1G LTR MaLR -3 587 16 349 350 33 22 chr5 12220596 12220776 -187409374 + L1MC4a LINE L1 7169 7350 -458 2495 183 33 9 chr5 12220786 12221328 -187408822 + MER90 LTR ERV1 1 596 -18 292 310 139 12 chr5 12221375 12221680 -187408470 + L1MC4a LINE L1 5576 5793 -328 208 375 79 29 chr5 12225425 12225841 -187404309 + L2 LINE L2 2320 2756 -558 1295 194 24 8 chr5 12226294 12226546 -187403604 + AluJo SINE Alu 39 294 -18 2262 108 0 13 chr5 12226794 12227109 -187403041 - AluSx SINE Alu 0 312 2 266 358 75 11 chr5 12227388 12227575 -187402575 - MIR SINE MIR -40 222 24 351 299 76 28 chr5 12227834 12227864 -187402286 - MIR3 SINE MIR -33 175 148 2123 115 0 20 chr5 12227864 12228169 -187401981 - AluSx SINE Alu -13 299 1 351 299 76 28 chr5 12228169 12228282 -187401868 - MIR3 SINE MIR -60 148 25 470 273 123 0 chr5 12228574 12228755 -187401395 - L2 LINE L2 -747 2567 2363 2424 88 0 25 chr5 12228755 12229072 -187401078 - AluSc SINE Alu 0 309 1 342 91 0 0 chr5 12230087 12230142 -187400008 + (TG)n Simple_repeat Simple_repeat 1 55 0 2089 110 45 0 chr5 12231370 12231660 -187398490 - AluSx SINE Alu -9 303 1 24 32 0 0 chr5 12232826 12232857 -187397293 + AT_rich Low_complexity Low_complexity 1 31 0 315 0 0 0 chr5 12234092 12234127 -187396023 + (TA)n Simple_repeat Simple_repeat 2 36 0 2176 110 0 25 chr5 12234127 12234445 -187395705 - AluSx SINE Alu -2 310 1 216 0 0 0 chr5 12234470 12234494 -187395656 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 26 64 0 0 chr5 12234901 12234948 -187395202 + AT_rich Low_complexity Low_complexity 1 47 0 1370 205 115 18 chr5 12237570 12238023 -187392127 + L1M4 LINE L1 4802 5298 -848 484 275 178 51 chr5 12238048 12238660 -187391490 + L2 LINE L2 2625 3311 -2 316 311 151 50 chr5 12238922 12239073 -187391077 - L1MC/D LINE L1 -2108 5700 5515 1721 88 102 56 chr5 12239073 12239358 -187390792 - AluSg SINE Alu -10 300 3 316 311 151 50 chr5 12239358 12239444 -187390706 - L1MC/D LINE L1 -2293 5515 5439 2015 151 0 0 chr5 12441496 12441803 -187188347 - AluSx SINE Alu 0 307 1 2022 148 0 10 chr5 12441976 12442281 -187187869 + AluJb SINE Alu 1 302 -10 444 292 0 15 chr5 12442630 12442760 -187187390 - MIR SINE MIR -127 135 8 1551 175 32 3 chr5 12442945 12443255 -187186895 - MER90 LTR ERV1 -254 360 1 263 345 36 24 chr5 12443265 12443433 -187186717 - L1MC4 LINE L1 -612 7430 7261 1146 242 81 98 chr5 12443454 12444036 -187186114 + MLT1G LTR MaLR 16 587 -3 437 262 6 98 chr5 12444038 12444274 -187185876 - L1MC4 LINE L1 -733 7228 7040 1305 134 20 136 chr5 12444274 12444673 -187185477 - Tigger5 DNA MER2_type -1 2322 11 429 223 45 36 chr5 12445300 12445412 -187184738 + MER81 DNA DNA 2 114 0 299 227 134 10 chr5 12445875 12445972 -187184178 + MLT1C LTR MaLR 5 113 -354 2193 113 0 0 chr5 12445989 12446272 -187183878 - AluSx SINE Alu -29 283 1 637 129 0 11 chr5 12446344 12446437 -187183713 - AluS SINE Alu -221 92 1 1067 214 58 90 chr5 12446437 12446815 -187183335 + MLT1C LTR MaLR 102 467 0 508 112 31 0 chr5 12447274 12447372 -187182778 + CT-rich Low_complexity Low_complexity 2 102 0 267 187 13 27 chr5 12448006 12448081 -187182069 - MLT1K LTR MaLR -323 265 192 408 40 0 0 chr5 12448441 12448491 -187181659 + (GA)n Simple_repeat Simple_repeat 2 51 0 * 558 0 0 0 chr5 12448490 12448552 -187181598 + (TG)n Simple_repeat Simple_repeat 2 63 0 1184 210 102 46 chr5 12448606 12448818 -187181332 + L1MD3 LINE L1 7459 7658 -384 2441 104 0 0 chr5 12448818 12449127 -187181023 + AluSx SINE Alu 1 309 -3 1184 210 102 46 chr5 12449127 12449142 -187181008 + L1MD3 LINE L1 7658 7671 -371 3510 191 10 2 chr5 12449142 12449740 -187180410 - MER77 LTR ERV1 -2 603 1 1184 210 102 46 chr5 12449740 12450005 -187180145 + L1MD3 LINE L1 7671 8041 -1 2396 80 23 0 chr5 12450025 12450324 -187179826 + AluSx SINE Alu 1 306 -6 183 242 0 65 chr5 12450548 12450610 -187179540 + MIR SINE MIR 96 153 -109 441 256 70 58 chr5 12450851 12451007 -187179143 + L2 LINE L2 3154 3311 -2 2088 146 0 7 chr5 12451190 12451367 -187178783 - AluSx SINE Alu -6 306 130 189 74 0 0 chr5 12451367 12451394 -187178756 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2088 146 0 7 chr5 12451394 12451524 -187178626 - AluSx SINE Alu -182 130 1 1543 201 120 21 chr5 12451918 12452336 -187177814 + MLT1C LTR MaLR 1 459 -8 266 115 19 0 chr5 12452338 12452390 -187177760 + (TATAA)n Simple_repeat Simple_repeat 1 53 0 450 280 91 32 chr5 12452512 12452861 -187177289 + L1ME3A LINE L1 5127 5476 -690 2304 234 57 39 chr5 12452902 12453496 -187176654 + MER77 LTR ERV1 1 605 0 1557 189 70 22 chr5 12453954 12454324 -187175826 + MLT1B LTR MaLR 1 388 -2 224 263 70 0 chr5 12456091 12456148 -187174002 - L2 LINE L2 -12 3260 3200 479 303 19 19 chr5 12456169 12456324 -187173826 + MIR SINE MIR 90 244 -18 244 280 167 7 chr5 12456336 12456486 -187173664 - MIR SINE MIR -73 189 16 298 238 83 72 chr5 12456597 12456611 -187173539 + MER112 DNA MER1_type 1 13 -247 1747 167 0 67 chr5 12456611 12456940 -187173210 - AluJo SINE Alu -5 307 1 298 238 83 72 chr5 12456940 12457087 -187173063 + MER112 DNA MER1_type 13 157 -103 387 0 0 0 chr5 12457087 12457130 -187173020 + (TG)n Simple_repeat Simple_repeat 2 44 0 1443 180 67 0 chr5 12457130 12457397 -187172753 - AluJb SINE Alu -27 285 1 298 238 83 72 chr5 12457397 12457426 -187172724 + MER112 DNA MER1_type 156 195 -65 389 280 122 62 chr5 12458004 12458358 -187171792 + MLT1J2 LTR MaLR 31 405 -45 1449 224 80 23 chr5 12458473 12458910 -187171240 + MLT1C LTR MaLR 6 467 0 2195 118 3 0 chr5 12459121 12459409 -187170741 - AluSx SINE Alu -18 294 6 2152 98 3 18 chr5 12459791 12460123 -187170027 - AluSx SINE Alu 0 328 1 1115 216 16 0 chr5 12460183 12460428 -187169722 - MLT1C LTR MaLR -6 461 213 1883 149 0 17 chr5 12460429 12460738 -187169412 - AluSx SINE Alu 0 304 1 1404 262 32 46 chr5 12460755 12461278 -187168872 + L1ME3A LINE L1 5595 6110 -60 2197 95 0 63 chr5 12461397 12461714 -187168436 + AluSx SINE Alu 1 297 -15 1253 114 0 0 chr5 12461719 12461885 -187168265 + AluSq SINE Alu 139 304 -9 222 121 0 0 chr5 12461922 12461955 -187168195 + MIR SINE MIR 218 250 -12 321 230 50 20 chr5 12462071 12462171 -187167979 + L1ME3A LINE L1 6060 6162 -8 279 325 68 0 chr5 12462183 12462300 -187167850 + MIR SINE MIR 137 261 -1 2751 161 66 19 chr5 12462406 12462892 -187167258 - LTR22 LTR ERVK 0 509 1 506 220 57 38 chr5 12462932 12463091 -187167059 - MER46C DNA MER2_type -174 164 3 335 233 58 0 chr5 12463466 12463552 -187166598 + MER53 DNA DNA 5 95 -94 * 346 198 278 8 chr5 12463478 12463604 -187166546 - MER53 DNA DNA -7 182 23 2092 171 34 8 chr5 12463668 12464048 -187166102 + MLT1B LTR MaLR 1 390 0 1921 145 21 0 chr5 12464702 12464985 -187165165 - AluSx SINE Alu -23 289 1 654 237 19 0 chr5 12465095 12465251 -187164899 - MER20 DNA MER1_type -14 205 47 276 160 40 0 chr5 12466227 12466277 -187163873 - MER5B DNA MER1_type -126 52 1 266 256 73 0 chr5 12466292 12466374 -187163776 + MER5B DNA MER1_type 58 145 -33 183 265 255 20 chr5 12466402 12466500 -187163650 - MER5A DNA MER1_type -2 187 67 341 203 35 7 chr5 12466542 12466621 -187163529 + MER5A DNA MER1_type 13 109 -80 193 291 78 48 chr5 12466663 12466766 -187163384 - MIR3 SINE MIR -39 169 64 376 311 59 35 chr5 12467368 12467492 -187162658 - MARNA DNA Mariner -242 344 224 1954 132 7 26 chr5 12467492 12467795 -187162355 - AluJb SINE Alu -15 297 1 376 311 59 35 chr5 12467795 12467924 -187162226 - MARNA DNA Mariner -362 224 85 429 76 38 13 chr5 12468019 12468098 -187162052 + CT-rich Low_complexity Low_complexity 2 82 0 1840 219 35 20 chr5 12468701 12469157 -187160993 - MLT1C LTR MaLR -2 465 3 2100 121 0 0 chr5 12469219 12469528 -187160622 - AluSx SINE Alu 0 313 5 2403 84 0 10 chr5 12469635 12469984 -187160166 - AluSq SINE Alu 0 313 1 405 198 57 38 chr5 12470592 12470749 -187159401 - MLT1D LTR MaLR -16 451 292 583 180 55 0 chr5 12470841 12470969 -187159181 - MLT1D LTR MaLR -366 139 5 324 212 0 115 chr5 12471380 12471493 -187158657 + MER5A DNA MER1_type 10 109 -80 344 291 62 34 chr5 12472042 12472221 -187157929 + MLT1K LTR MaLR 145 328 -260 232 268 28 0 chr5 12472489 12472560 -187157590 + MLT1K LTR MaLR 509 581 -7 1939 156 0 3 chr5 12472839 12473127 -187157023 - AluJb SINE Alu -25 287 1 361 118 36 154 chr5 12473127 12473237 -187156913 - AluJo SINE Alu -167 135 39 418 301 75 7 chr5 12473503 12473649 -187156501 + MIR SINE MIR 107 262 0 362 211 65 49 chr5 12474415 12474601 -187155549 - MLT1C LTR MaLR -203 187 6 2273 92 17 0 chr5 12475047 12475340 -187154810 - AluSx SINE Alu -14 298 1 1095 257 36 23 chr5 12475345 12475648 -187154502 + LTR40a LTR ERVL 65 371 -148 607 118 11 0 chr5 12475648 12475741 -187154409 + MER74A LTR ERVL 1 94 -464 2055 133 0 7 chr5 12475849 12476179 -187153971 - AluSx SINE Alu 0 328 1 2351 110 0 0 chr5 12476183 12476492 -187153658 - AluSx SINE Alu -3 309 1 1859 98 0 4 chr5 12476989 12477224 -187152926 - AluSq SINE Alu -79 234 1 270 257 27 14 chr5 12477693 12477767 -187152383 + MER68 LTR ERV1 224 298 -264 298 272 48 20 chr5 12477844 12477991 -187152159 + MER77 LTR ERV1 427 577 -28 2204 120 7 0 chr5 12478539 12478847 -187151303 - AluSx SINE Alu -2 310 1 489 93 67 0 chr5 12478960 12479035 -187151115 + MADE1 DNA Mariner 1 80 0 918 124 0 0 chr5 12479131 12479260 -187150890 + FLAM_C SINE Alu 14 142 -1 1244 172 57 0 chr5 12479268 12479512 -187150638 + L1M4 LINE L1 4668 4925 -1221 406 214 95 77 chr5 12479665 12479833 -187150317 - L1M4 LINE L1 -2865 3281 3111 306 277 92 0 chr5 12479841 12479971 -187150179 - L1M4 LINE L1 -3136 3010 2869 1932 130 60 41 chr5 12480504 12480872 -187149278 + THE1C LTR MaLR 1 375 0 2359 97 0 0 chr5 12480903 12481203 -187148947 - AluY SINE Alu -11 300 1 340 215 158 51 chr5 12481962 12482120 -187148030 - MER5A DNA MER1_type -6 183 9 761 196 27 71 chr5 12482135 12482201 -187147949 - MER5B DNA MER1_type 0 178 111 2627 75 0 0 chr5 12482201 12482509 -187147641 + AluSq SINE Alu 1 308 -5 761 196 27 71 chr5 12482509 12482626 -187147524 - MER5B DNA MER1_type -67 111 3 2112 107 4 0 chr5 12482888 12483195 -187146955 + AluSx SINE Alu 1 308 0 2006 159 3 7 chr5 12483531 12483840 -187146310 + AluJo SINE Alu 1 308 -4 558 285 35 0 chr5 12483860 12484032 -187146118 + MLT1H LTR MaLR 165 342 -207 2359 115 0 0 chr5 12484213 12484525 -187145625 + AluSx SINE Alu 1 312 0 261 0 0 0 chr5 12484763 12484792 -187145358 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1900 131 4 0 chr5 12484800 12485075 -187145075 - AluJb SINE Alu -36 276 1 25 0 0 0 chr5 12485326 12485351 -187144799 + AT_rich Low_complexity Low_complexity 1 25 0 677 223 16 77 chr5 12486103 12486350 -187143800 + MARNA DNA Mariner 184 415 -171 227 191 0 43 chr5 12487051 12487098 -187143052 - L2 LINE L2 0 3272 3228 2720 30 3 0 chr5 12487313 12487617 -187142533 - AluY SINE Alu -6 305 1 2184 119 86 6 chr5 12488037 12488374 -187141776 + THE1B LTR MaLR 1 364 0 297 155 0 0 chr5 12488500 12488558 -187141592 + (CA)n Simple_repeat Simple_repeat 1 58 0 705 268 84 9 chr5 12488910 12489123 -187141027 - MIR SINE MIR -19 243 15 462 200 30 0 chr5 12489207 12489307 -187140843 - MLT1G LTR MaLR -6 584 482 372 310 48 16 chr5 12489566 12489753 -187140397 - MLT1G1 LTR MaLR -398 197 5 1962 89 4 0 chr5 12490082 12490330 -187139820 + AluSp SINE Alu 54 302 -11 2052 86 25 4 chr5 12491013 12491319 -187138831 + AluSx SINE Alu 1 312 0 409 246 0 79 chr5 12491414 12491540 -187138610 + MIR SINE MIR 115 230 -32 31 26 0 0 chr5 12492068 12492106 -187138044 + AT_rich Low_complexity Low_complexity 1 38 0 2157 120 0 31 chr5 12492115 12492432 -187137718 - AluSg SINE Alu -3 307 1 2761 231 69 83 chr5 12492438 12492521 -187137629 - L1MC4 LINE L1 -1 8041 7958 2264 121 0 3 chr5 12492521 12492826 -187137324 - AluSx SINE Alu -8 304 1 2761 231 69 83 chr5 12492826 12493428 -187136722 - L1MC4 LINE L1 -84 7958 7378 2277 108 0 14 chr5 12493428 12493724 -187136426 - AluSq SINE Alu -21 292 1 2761 231 69 83 chr5 12493724 12494236 -187135914 - L1MC4 LINE L1 -664 7378 6860 754 205 42 6 chr5 12494595 12494761 -187135389 + MER20 DNA MER1_type 34 205 -14 2307 100 0 10 chr5 12494849 12495159 -187134991 + AluSx SINE Alu 1 307 -5 773 218 41 0 chr5 12495844 12496014 -187134136 - MER45A DNA AcHobo -1 177 1 2453 124 28 5 chr5 12496187 12496575 -187133575 - MLT2C1 LTR ERVL 0 397 1 256 209 353 14 chr5 12497667 12497806 -187132344 - MER5A DNA MER1_type -3 186 1 877 196 41 0 chr5 12498121 12498340 -187131810 + L1MB7 LINE L1 5955 6182 -2 1913 166 0 10 chr5 12498967 12499269 -187130881 - AluJb SINE Alu -13 299 1 564 188 0 60 chr5 12499877 12499994 -187130156 + MER81 DNA DNA 2 111 -3 2165 106 24 3 chr5 12500726 12501019 -187129131 + AluSq SINE Alu 1 299 -14 215 103 29 73 chr5 12501020 12501088 -187129062 + GA-rich Low_complexity Low_complexity 1 65 0 251 145 97 16 chr5 12501262 12501324 -187128826 + GA-rich Low_complexity Low_complexity 1 67 0 226 274 84 106 chr5 12501715 12501894 -187128256 - MIR SINE MIR -14 248 74 307 235 0 0 chr5 12501984 12502052 -187128098 - MER5A DNA MER1_type -106 83 16 497 254 188 0 chr5 12502207 12502376 -187127774 - L1MD2 LINE L1 -9 6350 6128 180 0 0 0 chr5 12502376 12502396 -187127754 + (TG)n Simple_repeat Simple_repeat 2 21 0 497 254 188 0 chr5 12502396 12502450 -187127700 - L1MD2 LINE L1 -231 6128 6085 * 611 297 61 0 chr5 12502446 12502658 -187127492 - L1MD1 LINE L1 -159 6083 5859 2362 74 7 10 chr5 12502936 12503232 -187126918 - AluSc SINE Alu -14 295 1 2076 147 6 16 chr5 12503813 12504127 -187126023 - AluJo SINE Alu -1 311 1 243 0 0 0 chr5 12504942 12504969 -187125181 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2285 85 3 3 chr5 12504970 12505280 -187124870 - AluSq SINE Alu 0 310 1 273 146 0 0 chr5 12505881 12505929 -187124221 + (CA)n Simple_repeat Simple_repeat 1 48 0 2120 89 55 27 chr5 12506635 12506928 -187123222 + AluSx SINE Alu 1 301 -11 1500 281 62 19 chr5 12507411 12507965 -187122185 + L1ME3A LINE L1 5583 6159 -11 188 35 35 0 chr5 12507965 12507994 -187122156 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 412 119 0 0 chr5 12508000 12508059 -187122091 - AluJ/FLAM SINE Alu -252 60 2 224 370 37 9 chr5 12508119 12508227 -187121923 + MIR SINE MIR 152 262 0 2164 123 0 3 chr5 12508706 12508999 -187121151 + AluSq SINE Alu 1 292 -21 648 255 0 25 chr5 12509093 12509254 -187120896 + MIR SINE MIR 98 254 -8 2356 94 3 3 chr5 12509970 12510269 -187119881 + AluSq SINE Alu 1 299 -14 943 234 75 34 chr5 12510273 12510538 -187119612 + MLT1C LTR MaLR 192 467 0 367 341 0 0 chr5 12510659 12510838 -187119312 + (CA)n Simple_repeat Simple_repeat 2 180 0 294 366 0 0 chr5 12510895 12511070 -187119080 + (CA)n Simple_repeat Simple_repeat 2 176 0 343 352 0 0 chr5 12511105 12511284 -187118866 + (CA)n Simple_repeat Simple_repeat 2 180 0 * 346 291 0 53 chr5 12511236 12511425 -187118725 + (CACG)n Simple_repeat Simple_repeat 1 179 0 263 378 9 0 chr5 12511488 12511682 -187118468 - L1P3 LINE L1 -302 5819 5625 656 226 55 6 chr5 12511688 12511852 -187118298 - L1MA10 LINE L1 0 6334 6163 774 188 0 0 chr5 12511860 12511993 -187118157 - FLAM_A SINE Alu 0 133 1 1621 143 4 24 chr5 12512527 12512779 -187117371 - AluJo SINE Alu -38 274 28 1078 189 50 36 chr5 12512930 12513231 -187116919 - LTR37A LTR ERV1 0 426 122 1556 214 33 82 chr5 12513237 12513723 -187116427 + MLT1C LTR MaLR 6 467 0 188 363 29 29 chr5 12514104 12514206 -187115944 - L2 LINE L2 -2 3311 3210 2492 81 0 0 chr5 12514387 12514683 -187115467 - AluSg SINE Alu -14 296 1 223 89 0 44 chr5 12515822 12515867 -187114283 + (TTTC)n Simple_repeat Simple_repeat 4 46 0 282 98 18 6 chr5 12515867 12515921 -187114229 - AluJo SINE Alu -263 37 1 1960 138 0 7 chr5 12516704 12516980 -187113170 - AluSx SINE Alu -8 304 31 1628 148 104 4 chr5 12517307 12517577 -187112573 - AluJb SINE Alu -15 297 1 2478 61 0 22 chr5 12517694 12518027 -187112123 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 12518096 12518117 -187112033 + AT_rich Low_complexity Low_complexity 1 21 0 23 101 0 0 chr5 12519957 12520036 -187110114 + GC_rich Low_complexity Low_complexity 1 79 0 24 0 0 0 chr5 12520218 12520242 -187109908 + GC_rich Low_complexity Low_complexity 1 24 0 40 0 0 0 chr5 12520425 12520465 -187109685 + GC_rich Low_complexity Low_complexity 1 40 0 264 59 0 0 chr5 12521625 12521659 -187108491 + (GAAAA)n Simple_repeat Simple_repeat 5 38 0 687 52 155 0 chr5 12522042 12522139 -187108011 - THE1C LTR MaLR -263 112 1 387 248 73 0 chr5 12522776 12522885 -187107265 + MIR SINE MIR 111 227 -35 204 40 0 0 chr5 12522957 12522982 -187107168 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2063 117 3 3 chr5 12524542 12524833 -187105317 - AluSx SINE Alu -21 291 1 675 35 0 0 chr5 12525676 12525762 -187104388 + (GA)n Simple_repeat Simple_repeat 2 87 0 935 141 7 0 chr5 12525762 12525904 -187104246 - AluSg/x SINE Alu -41 271 129 886 189 0 0 chr5 12525922 12526065 -187104085 - FLAM_C SINE Alu 0 143 1 2361 107 0 0 chr5 12526861 12527159 -187102991 - AluSx SINE Alu -14 298 1 441 318 28 11 chr5 12527223 12527399 -187102751 + MLT1L LTR MaLR 433 611 -4 1185 140 151 65 chr5 12528000 12528304 -187101846 + AluJo SINE Alu 1 302 0 451 298 23 8 chr5 12528908 12529039 -187101111 - LTR67 LTR ERVL -1 556 424 180 0 0 0 chr5 12529069 12529089 -187101061 + (A)n Simple_repeat Simple_repeat 1 20 0 2449 227 48 5 chr5 12529103 12529689 -187100461 - L1MC3 LINE L1 -25 7760 7150 763 159 0 43 chr5 12530122 12530260 -187099890 + FLAM_C SINE Alu 1 132 -1 2197 109 0 61 chr5 12530319 12530648 -187099502 - AluSx SINE Alu -3 309 1 1454 189 115 9 chr5 12530905 12531243 -187098907 + MLT1A2 LTR MaLR 1 374 0 271 208 0 57 chr5 12532683 12532789 -187097361 + (CTCA)n Simple_repeat Simple_repeat 4 103 0 183 146 0 0 chr5 12534208 12534249 -187095901 + (A)n Simple_repeat Simple_repeat 1 41 0 513 289 18 36 chr5 12534374 12534540 -187095610 + L1ME1 LINE L1 5953 6115 -51 330 250 7 46 chr5 12534553 12534705 -187095445 + (TTATA)n Simple_repeat Simple_repeat 3 148 0 1999 121 3 35 chr5 12534764 12535079 -187095071 + AluSx SINE Alu 1 305 -7 2110 132 3 10 chr5 12535091 12535387 -187094763 + AluJo SINE Alu 5 298 -14 216 0 0 0 chr5 12536031 12536055 -187094095 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2327 81 14 0 chr5 12536607 12536903 -187093247 - AluSc SINE Alu -9 300 1 985 139 7 0 chr5 12536903 12537047 -187093103 - FRAM SINE Alu -14 162 18 231 248 9 55 chr5 12537573 12537682 -187092468 + G-rich Low_complexity Low_complexity 2 105 0 1714 234 64 2 chr5 12537855 12538295 -187091855 - MLT1C LTR MaLR 0 467 1 2222 111 0 3 chr5 12538732 12539021 -187091129 - AluSx SINE Alu -24 288 1 341 231 64 22 chr5 12539253 12539408 -187090742 - MER63 DNA MER1_type -2 1686 675 439 256 48 0 chr5 12539439 12539564 -187090586 - MIR SINE MIR -92 170 40 337 307 68 0 chr5 12539599 12539762 -187090388 - L1ME4a LINE L1 -224 5897 5724 413 249 6 0 chr5 12540092 12540269 -187089881 + (CA)n Simple_repeat Simple_repeat 1 178 0 2200 182 42 7 chr5 12540547 12540817 -187089333 - MLT1C LTR MaLR -16 451 192 6210 84 9 15 chr5 12540817 12541199 -187088951 + L1PA10 LINE L1 5106 5489 -679 2394 93 0 3 chr5 12541199 12541499 -187088651 + AluSp SINE Alu 1 299 -14 6210 84 9 15 chr5 12541499 12542170 -187087980 + L1PA10 LINE L1 5489 6155 -13 198 0 0 0 chr5 12542170 12542192 -187087958 + (TTAAA)n Simple_repeat Simple_repeat 4 25 0 6210 84 9 15 chr5 12542192 12542203 -187087947 + L1PA10 LINE L1 6155 6165 -3 2200 182 42 7 chr5 12542203 12542365 -187087785 - MLT1C LTR MaLR -275 192 4 189 0 0 0 chr5 12542533 12542554 -187087596 + (T)n Simple_repeat Simple_repeat 1 21 0 719 202 56 17 chr5 12542948 12543233 -187086917 + MER74A LTR ERVL 170 558 0 863 137 27 0 chr5 12543236 12543382 -187086768 + LTR40a LTR ERVL 370 519 0 471 196 0 28 chr5 12543673 12543780 -187086370 - MER5A DNA MER1_type -84 105 2 225 229 0 0 chr5 12544116 12544164 -187085986 + L2 LINE L2 3224 3271 -1 2302 89 14 0 chr5 12544378 12544669 -187085481 + AluSp SINE Alu 1 295 -18 245 295 64 27 chr5 12545085 12545200 -187084950 + MIR SINE MIR 40 157 -75 1290 202 77 62 chr5 12545645 12546100 -187084050 + MLT1C LTR MaLR 6 467 0 2204 138 0 0 chr5 12546477 12546774 -187083376 - AluSx SINE Alu -15 297 1 216 289 62 99 chr5 12546939 12547150 -187083000 + MIR SINE MIR 55 257 -5 1317 190 40 0 chr5 12547210 12547484 -187082666 + MER58B DNA MER1_type 57 341 0 414 295 138 9 chr5 12547484 12547694 -187082456 + MIR SINE MIR 26 262 0 619 270 81 43 chr5 12548260 12548630 -187081520 + MLT1J2 LTR MaLR 59 442 -8 351 269 107 54 chr5 12548630 12548779 -187081371 - MIR3 SINE MIR -40 168 12 35 0 0 0 chr5 12548785 12548820 -187081330 + AT_rich Low_complexity Low_complexity 1 35 0 1284 260 68 41 chr5 12548958 12549373 -187080777 - LTR41 LTR ERVL -6 767 342 1243 290 91 24 chr5 12549651 12550203 -187079947 - MLT1E LTR MaLR 0 593 5 2110 144 3 3 chr5 12550241 12550553 -187079597 - AluSx SINE Alu 0 312 1 1342 229 53 51 chr5 12550798 12551231 -187078919 - MLT1C LTR MaLR 0 467 34 298 238 33 90 chr5 12551542 12551664 -187078486 + MIR SINE MIR 81 195 -67 462 86 14 20 chr5 12551667 12551752 -187078398 + MLT1E1 LTR MaLR 1 81 -512 383 304 26 41 chr5 12551869 12552063 -187078087 - MLT1K LTR MaLR -244 344 154 743 316 94 2 chr5 12552512 12552927 -187077223 + LTR33 LTR ERVL 37 489 -32 2038 142 0 31 chr5 12552978 12553295 -187076855 + AluSx SINE Alu 4 310 -2 1771 164 3 40 chr5 12554920 12555224 -187074926 - AluJo SINE Alu -14 298 6 2458 73 13 0 chr5 12555249 12555549 -187074601 - AluY SINE Alu -7 304 1 2753 134 11 17 chr5 12556620 12557083 -187073067 + MER4C LTR ERV1 3 462 -3 1679 196 19 11 chr5 12557286 12557659 -187072491 + MLT1B LTR MaLR 15 390 0 2047 101 56 10 chr5 12558567 12558855 -187071295 - AluSq SINE Alu -12 301 1 2550 62 3 3 chr5 12558881 12559189 -187070961 - AluY SINE Alu -3 308 1 422 273 86 16 chr5 12560579 12560766 -187069384 + L2 LINE L2 3094 3293 -20 1968 125 25 7 chr5 12561494 12561811 -187068339 - AluSq SINE Alu 0 322 1 3379 173 75 78 chr5 12562126 12562990 -187067160 + MER21B LTR ERV1 1 862 -1 544 297 146 47 chr5 12564522 12565298 -187064852 - L2 LINE L2 -40 3273 2428 211 274 183 21 chr5 12566060 12566246 -187063904 - L2 LINE L2 -1163 2151 1936 311 258 106 46 chr5 12566274 12566425 -187063725 - MER63A DNA MER1_type 0 210 51 2376 101 0 3 chr5 12567915 12568221 -187061929 - AluSq SINE Alu -8 305 1 204 297 121 0 chr5 12569544 12569635 -187060515 + MIR SINE MIR 99 200 -62 1777 174 16 7 chr5 12570003 12570307 -187059843 + AluJo SINE Alu 1 307 -5 493 254 8 8 chr5 12570506 12570624 -187059526 + L2 LINE L2 3193 3310 -3 2258 101 0 3 chr5 12571790 12572086 -187058064 + AluSx SINE Alu 1 295 -17 447 52 0 0 chr5 12572087 12572145 -187058005 + (CA)n Simple_repeat Simple_repeat 2 59 0 1911 118 54 25 chr5 12572149 12572429 -187057721 + AluSx SINE Alu 1 288 -24 401 75 0 15 chr5 12572432 12572499 -187057651 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 2382 76 9 22 chr5 12573625 12573941 -187056209 + AluSp SINE Alu 1 312 -1 2078 135 10 0 chr5 12574895 12575191 -187054959 - AluSx SINE Alu -13 299 1 335 296 171 19 chr5 12576257 12576473 -187053677 + MIR SINE MIR 14 262 0 2026 148 0 22 chr5 12576516 12576833 -187053317 - AluJb SINE Alu -2 310 1 519 225 59 59 chr5 12577724 12577755 -187052395 + MER20 DNA MER1_type 33 63 -156 2053 125 3 10 chr5 12577755 12578051 -187052099 - AluSx SINE Alu -18 294 1 519 225 59 59 chr5 12578051 12578206 -187051944 + MER20 DNA MER1_type 62 219 0 1882 176 10 0 chr5 12578478 12578784 -187051366 - AluJo SINE Alu -3 309 1 1994 119 17 3 chr5 12579157 12579451 -187050699 + AluSx SINE Alu 1 298 -14 2156 89 14 3 chr5 12579874 12580179 -187049971 + AluSq SINE Alu 1 308 0 1698 178 132 64 chr5 12580422 12580819 -187049331 + MLT1D LTR MaLR 3 438 -67 2850 7 0 0 chr5 12580819 12581121 -187049029 - AluYb8 SINE Alu -16 302 1 1698 178 132 64 chr5 12581121 12581194 -187048956 + MLT1D LTR MaLR 438 505 0 860 136 0 0 chr5 12581271 12581389 -187048761 - FLAM_C SINE Alu -15 118 1 22 0 0 0 chr5 12581410 12581432 -187048718 + AT_rich Low_complexity Low_complexity 1 22 0 377 315 151 50 chr5 12583444 12583530 -187046620 + L1ME4a LINE L1 5439 5515 -2293 1778 87 101 56 chr5 12583530 12583816 -187046334 + AluSg SINE Alu 3 301 -9 377 315 151 50 chr5 12583816 12583967 -187046183 + L1ME4a LINE L1 5515 5700 -2108 346 271 192 34 chr5 12584019 12584196 -187045954 + L1ME4a LINE L1 5841 6045 -76 429 257 174 69 chr5 12584229 12584579 -187045571 - L2 LINE L2 -2 3311 2925 432 194 188 21 chr5 12584705 12584849 -187045301 - L1M4 LINE L1 -1177 4969 4802 26 64 0 0 chr5 12587472 12587519 -187042631 + AT_rich Low_complexity Low_complexity 1 47 0 216 0 0 0 chr5 12587926 12587950 -187042200 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2136 128 0 3 chr5 12587975 12588280 -187041870 + AluSq SINE Alu 1 304 -9 222 121 0 0 chr5 12588317 12588350 -187041800 + MIR SINE MIR 218 250 -12 321 230 50 20 chr5 12588466 12588566 -187041584 + L1ME3A LINE L1 6060 6162 -8 279 325 68 0 chr5 12588578 12588695 -187041455 + MIR SINE MIR 137 261 -1 2675 165 68 19 chr5 12588801 12589286 -187040864 - LTR22 LTR ERVK 0 509 1 506 220 57 38 chr5 12589327 12589486 -187040664 - MER46C DNA MER2_type -174 164 3 335 233 58 0 chr5 12589861 12589947 -187040203 + MER53 DNA DNA 5 95 -94 * 346 198 278 8 chr5 12589873 12589999 -187040151 - MER53 DNA DNA -7 182 23 2092 171 34 8 chr5 12590063 12590443 -187039707 + MLT1B LTR MaLR 1 390 0 1851 144 21 7 chr5 12591097 12591382 -187038768 - AluSx SINE Alu -23 289 1 654 237 19 0 chr5 12591492 12591648 -187038502 - MER20 DNA MER1_type -14 205 47 385 231 189 14 chr5 12592640 12592783 -187037367 - L1M4 LINE L1 -1177 4969 4802 26 64 0 0 chr5 12595406 12595453 -187034697 + AT_rich Low_complexity Low_complexity 1 47 0 216 0 0 0 chr5 12595860 12595884 -187034266 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2199 110 0 22 chr5 12595909 12596228 -187033922 + AluSx SINE Alu 1 312 0 543 53 0 0 chr5 12596228 12596303 -187033847 + (TA)n Simple_repeat Simple_repeat 2 76 0 24 32 0 0 chr5 12597540 12597571 -187032579 + AT_rich Low_complexity Low_complexity 1 31 0 2089 110 45 0 chr5 12598737 12599027 -187031123 + AluSx SINE Alu 1 303 -9 324 94 0 0 chr5 12600255 12600308 -187029842 + (CA)n Simple_repeat Simple_repeat 1 53 0 2424 88 0 25 chr5 12601323 12601640 -187028510 + AluSc SINE Alu 1 309 0 470 273 123 0 chr5 12601640 12601821 -187028329 + L2 LINE L2 2364 2567 -747 351 299 76 28 chr5 12602113 12602226 -187027924 + MIR3 SINE MIR 25 148 -60 2123 115 0 20 chr5 12602226 12602531 -187027619 + AluSx SINE Alu 1 299 -13 351 299 76 28 chr5 12602531 12602561 -187027589 + MIR3 SINE MIR 148 175 -33 266 358 75 11 chr5 12602820 12603007 -187027143 + MIR SINE MIR 24 222 -40 2203 117 0 16 chr5 12603286 12603602 -187026548 + AluSx SINE Alu 2 312 0 215 356 94 48 chr5 12603990 12604608 -187025542 - L2 LINE L2 -349 2965 2320 2690 151 49 31 chr5 12607029 12607584 -187022566 + MER34B LTR ERV1 1 565 0 754 182 0 23 chr5 12610132 12610264 -187019886 - FLAM_C SINE Alu -14 129 1 646 180 0 0 chr5 12611492 12611592 -187018558 + FRAM SINE Alu 45 144 -32 917 200 15 15 chr5 12612055 12612260 -187017890 + MER3 DNA MER1_type 1 205 -4 2200 130 34 6 chr5 12612260 12612614 -187017536 + THE1B LTR MaLR 1 364 0 1715 171 10 10 chr5 12613281 12613573 -187016577 + AluJo SINE Alu 1 292 -20 209 311 134 34 chr5 12613828 12613947 -187016203 + L2 LINE L2 3182 3312 -1 * 225 229 115 21 chr5 12613945 12614041 -187016109 - MIR SINE MIR -68 194 90 309 254 83 55 chr5 12614189 12614370 -187015780 + MIR SINE MIR 71 256 -6 645 257 59 10 chr5 12616078 12616280 -187013870 + L2 LINE L2 1765 1976 -1338 1286 278 78 9 chr5 12616288 12616876 -187013274 + L2 LINE L2 2471 3109 -204 600 228 0 0 chr5 12617034 12617157 -187012993 + FLAM_C SINE Alu 1 123 -20 21 0 0 0 chr5 12617157 12617178 -187012972 + AT_rich Low_complexity Low_complexity 1 21 0 1924 173 0 0 chr5 12617453 12617753 -187012397 + AluJb SINE Alu 1 300 -12 2271 79 0 36 chr5 12618316 12618620 -187011530 - AluSp SINE Alu -20 293 1 40 21 0 0 chr5 12618905 12618952 -187011198 + AT_rich Low_complexity Low_complexity 1 47 0 1930 140 0 0 chr5 12619628 12619906 -187010244 + AluSg SINE Alu 25 302 -8 1822 170 60 0 chr5 12620057 12620375 -187009775 - MER1B DNA MER1_type 0 337 1 282 377 31 13 chr5 12621257 12621416 -187008734 + MIR3 SINE MIR 42 203 -5 346 333 63 0 chr5 12621821 12621932 -187008218 + L2 LINE L2 3153 3270 -2 1990 130 29 0 chr5 12622026 12622362 -187007788 + AluSx SINE Alu 1 344 0 546 268 83 20 chr5 12625669 12625923 -187004227 + L1MC4 LINE L1 6792 7061 -981 283 254 54 82 chr5 12626391 12626781 -187003369 + L1MC5 LINE L1 7311 7689 -272 375 237 38 23 chr5 12626994 12627125 -187003025 - Charlie7 DNA MER1_type -3 2609 2477 283 251 54 92 chr5 12630074 12630313 -186999837 + L2 LINE L2 3084 3313 0 470 261 154 0 chr5 12630583 12630771 -186999379 + MLT1L LTR MaLR 391 607 -8 23 54 0 0 chr5 12631096 12631133 -186999017 + AT_rich Low_complexity Low_complexity 1 37 0 2481 67 0 0 chr5 12631296 12631595 -186998555 + AluY SINE Alu 1 299 -12 27 0 0 0 chr5 12632349 12632376 -186997774 + AT_rich Low_complexity Low_complexity 1 27 0 261 303 290 24 chr5 12632579 12632876 -186997274 - L2 LINE L2 -370 2944 2569 * 268 294 210 63 chr5 12632872 12633020 -186997130 + L2 LINE L2 2915 3040 -273 1646 165 7 65 chr5 12633020 12633329 -186996821 + AluJb SINE Alu 1 291 -21 268 294 210 63 chr5 12633329 12633513 -186996637 + L2 LINE L2 3040 3296 -17 467 106 0 0 chr5 12633625 12633691 -186996459 - Alu SINE Alu -14 298 233 1116 216 163 25 chr5 12634128 12634526 -186995624 + MLT1H LTR MaLR 97 549 0 1768 175 34 3 chr5 12635019 12635311 -186994839 + AluSx SINE Alu 1 301 -11 1619 149 0 0 chr5 12635378 12635640 -186994510 + AluSq SINE Alu 1 262 -51 2366 51 7 0 chr5 12635902 12636197 -186993953 + AluY SINE Alu 1 297 -14 210 224 0 0 chr5 12636470 12636519 -186993631 + CT-rich Low_complexity Low_complexity 3 51 0 252 0 0 0 chr5 12636693 12636721 -186993429 + (A)n Simple_repeat Simple_repeat 1 28 0 1820 174 3 3 chr5 12636725 12637030 -186993120 + AluJo SINE Alu 1 305 -7 2036 125 7 7 chr5 12638456 12638751 -186991399 + AluSx SINE Alu 1 295 -17 361 297 130 20 chr5 12638995 12639241 -186990909 - L1M4 LINE L1 -3657 2489 2217 2112 244 94 13 chr5 12639468 12640170 -186989980 - L1ME3 LINE L1 -35 6110 5352 397 309 0 0 chr5 12640172 12640282 -186989868 + MER8 DNA MER2_type 3 112 -127 636 243 152 77 chr5 12640307 12640800 -186989350 - L1ME3 LINE L1 -797 5332 4803 308 315 116 8 chr5 12641040 12641307 -186988843 - HAL1 LINE L1 -749 1758 1463 332 301 99 33 chr5 12641441 12641654 -186988496 - L1ME3 LINE L1 -4951 1168 942 2110 134 3 0 chr5 12641938 12642237 -186987913 - AluSx SINE Alu -12 300 1 940 113 0 0 chr5 12642298 12642422 -186987728 - AluSg SINE Alu -12 300 177 770 71 0 0 chr5 12642422 12642520 -186987630 - AluSg SINE Alu -212 98 1 2209 117 0 3 chr5 12643841 12644140 -186986010 - AluSx SINE Alu -14 298 1 333 0 0 0 chr5 12644591 12644628 -186985522 + (CA)n Simple_repeat Simple_repeat 2 38 0 718 186 0 0 chr5 12644878 12644996 -186985154 + FLAM_C SINE Alu 1 118 -25 24 0 0 0 chr5 12644996 12645020 -186985130 + AT_rich Low_complexity Low_complexity 1 24 0 2404 64 0 20 chr5 12645024 12645322 -186984828 + AluY SINE Alu 2 293 -18 684 184 56 90 chr5 12645379 12645645 -186984505 + L1MC5 LINE L1 7611 7867 -94 769 231 61 47 chr5 12646353 12646565 -186983585 + MIR SINE MIR 48 262 0 4551 124 15 126 chr5 12648260 12649184 -186980966 - LTR12 LTR ERV1 0 826 5 2851 155 18 26 chr5 12649200 12649808 -186980342 - pTR5 LTR ERV1 -1094 1344 742 917 178 6 12 chr5 12651706 12651869 -186978281 - FRAM SINE Alu -14 162 1 888 201 99 11 chr5 12651880 12652143 -186978007 + Charlie1b DNA MER1_type 109 394 -129 763 252 52 0 chr5 12652767 12652922 -186977228 - AluJo SINE Alu -137 175 13 2316 99 74 42 chr5 12653093 12653446 -186976704 + THE1B LTR MaLR 1 364 0 222 280 220 38 chr5 12653446 12653578 -186976572 - MIR SINE MIR -25 237 82 242 192 0 19 chr5 12654026 12654078 -186976072 - L1M LINE L1 -804 5360 5310 629 120 56 9 chr5 12654251 12654359 -186975791 + L1MB3 LINE L1 6067 6179 -4 1910 155 3 10 chr5 12654383 12654693 -186975457 + AluJo SINE Alu 2 309 -3 2101 195 64 50 chr5 12654741 12655300 -186974850 + L1ME1 LINE L1 5597 6163 -3 975 279 54 56 chr5 12655495 12655812 -186974338 + MLT1I LTR MaLR 3 320 -89 1643 139 12 89 chr5 12655812 12655916 -186974234 - AluJo SINE Alu -13 299 189 1845 139 30 20 chr5 12655916 12656219 -186973931 + AluSx SINE Alu 1 306 -6 1643 139 12 89 chr5 12656219 12656438 -186973712 - AluJo SINE Alu -123 189 1 975 279 54 56 chr5 12656438 12656528 -186973622 + MLT1I LTR MaLR 320 409 0 2210 159 113 13 chr5 12657345 12657775 -186972375 - L1MC3 LINE L1 -8 7777 7297 189 0 0 0 chr5 12657775 12657796 -186972354 + (CATAT)n Simple_repeat Simple_repeat 2 22 0 2210 159 113 13 chr5 12657796 12657825 -186972325 - L1MC3 LINE L1 -488 7297 7272 1474 82 15 0 chr5 12657825 12658020 -186972130 + LTR3b LTR ERVK 1 198 -239 2212 76 32 0 chr5 12658399 12658697 -186971453 + AluSp SINE Alu 1 307 0 232 228 69 59 chr5 12658800 12658888 -186971262 + LTR33A LTR ERVL 59 150 -373 2299 96 3 0 chr5 12658888 12659181 -186970969 + AluSq SINE Alu 1 294 -19 232 228 69 59 chr5 12659181 12659193 -186970957 + LTR33A LTR ERVL 150 160 -363 363 236 172 19 chr5 12659375 12659453 -186970697 + LTR41 LTR ERVL 1 66 -707 180 0 0 0 chr5 12659453 12659473 -186970677 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 363 236 172 19 chr5 12659473 12659551 -186970599 + LTR41 LTR ERVL 66 181 -592 780 181 7 34 chr5 12659727 12659876 -186970274 - L1ME LINE L1 -601 5565 5421 * 3757 201 89 10 chr5 12659874 12661133 -186969017 - L1MB8 LINE L1 -4 6174 4810 873 171 126 31 chr5 12661141 12661585 -186968565 + Charlie1 DNA MER1_type 2186 2760 -1 2414 72 3 0 chr5 12661928 12662221 -186967929 + AluSp SINE Alu 1 294 -19 2396 92 3 0 chr5 12712749 12713052 -186917098 - AluSp SINE Alu -9 304 1 270 318 0 0 chr5 12714108 12714193 -186915957 + MIR SINE MIR 172 256 -6 1518 171 60 21 chr5 12714237 12714518 -186915632 + AluJo SINE Alu 13 304 -8 203 271 24 47 chr5 12715526 12715611 -186914539 + MIR SINE MIR 52 134 -74 859 227 54 111 chr5 12715750 12716120 -186914030 + MLT1A2 LTR MaLR 23 371 -3 529 321 71 12 chr5 12716221 12716461 -186913689 - MIR SINE MIR -2 260 7 2367 95 10 0 chr5 12717329 12717634 -186912516 + AluSx SINE Alu 1 308 -4 257 51 26 0 chr5 12717815 12717854 -186912296 + (TA)n Simple_repeat Simple_repeat 2 41 0 2247 109 3 0 chr5 12717854 12718148 -186912002 - AluSx SINE Alu -17 295 1 21 57 0 0 chr5 12718155 12718190 -186911960 + AT_rich Low_complexity Low_complexity 1 35 0 1086 213 79 136 chr5 12718418 12718962 -186911188 + L1ME3A LINE L1 5653 6165 -5 3608 162 30 2 chr5 12719264 12719870 -186910280 + L1PB4 LINE L1 5529 6151 -5 289 296 130 0 chr5 12719929 12720037 -186910113 + MIR SINE MIR 71 192 -70 437 332 92 18 chr5 12721037 12721320 -186908830 + L1MEd LINE L1 58 361 -5758 1863 230 126 26 chr5 12721354 12721893 -186908257 - MLT1E LTR MaLR 0 593 1 1052 235 238 8 chr5 12721951 12722329 -186907821 - LTR50 LTR ERVL -330 465 1 5153 176 14 7 chr5 12722588 12723634 -186906516 - L1 LINE L1 -743 5403 786 278 282 66 18 chr5 12723637 12723864 -186906286 + HAL1 LINE L1 885 1122 -1385 6231 216 41 29 chr5 12723939 12725376 -186904774 + L1PA13 LINE L1 1 1454 -5333 18307 197 15 12 chr5 12725479 12730066 -186900084 + L1PA13 LINE L1 808 5423 -1374 567 321 83 18 chr5 12730097 12730315 -186899835 - MIR SINE MIR -3 259 28 788 163 105 17 chr5 12730331 12730503 -186899647 - MER20 DNA MER1_type 0 219 33 199 315 212 7 chr5 12730608 12730754 -186899396 + MIR3 SINE MIR 25 200 -8 23386 177 29 22 chr5 12731298 12737470 -186892680 - L1PA11 LINE L1 -3 6486 287 352 250 5 162 chr5 12737944 12738160 -186891990 + MIR3 SINE MIR 19 200 -8 2163 118 0 0 chr5 12739400 12739689 -186890461 + AluSx SINE Alu 22 310 -2 23 33 0 0 chr5 12740607 12740637 -186889513 + AT_rich Low_complexity Low_complexity 1 30 0 221 319 77 0 chr5 12741618 12741709 -186888441 + L2 LINE L2 3163 3260 -12 259 233 0 33 chr5 12742268 12742328 -186887822 - HsTC2 DNA Tc2 -1808 90 33 16459 121 23 11 chr5 12742336 12742516 -186887634 - Tigger1 DNA MER2_type 0 2418 2242 2483 74 0 0 chr5 12742516 12742814 -186887336 - AluY SINE Alu -13 298 1 16459 121 23 11 chr5 12742814 12745021 -186885129 - Tigger1 DNA MER2_type -176 2242 1 2300 91 3 0 chr5 12745624 12745921 -186884229 + AluSp SINE Alu 1 298 -15 210 228 0 70 chr5 12746360 12746417 -186883733 + L2 LINE L2 3261 3313 0 250 286 98 90 chr5 12747669 12747802 -186882348 + L2 LINE L2 3138 3271 -1 22 56 0 0 chr5 12747867 12747903 -186882247 + AT_rich Low_complexity Low_complexity 1 36 0 360 241 34 23 chr5 12747941 12748046 -186882104 + MIR SINE MIR 21 126 -82 633 232 10 63 chr5 12748067 12748274 -186881876 + L2 LINE L2 2692 2887 -427 940 87 16 0 chr5 12748661 12748788 -186881362 - AluSg/x SINE Alu -8 304 176 373 202 219 0 chr5 12748934 12749048 -186881102 + L2 LINE L2 3175 3313 0 526 301 63 49 chr5 12749944 12750944 -186879206 + L1MC5 LINE L1 4431 5446 -743 1059 192 25 70 chr5 12750946 12751232 -186878918 + L1MC5 LINE L1 6919 7191 -770 1715 257 95 55 chr5 12751272 12752446 -186877704 + L1MC5 LINE L1 5612 6738 -1223 2401 139 27 61 chr5 12752446 12752920 -186877230 + L1MB8 LINE L1 5721 6178 0 1715 257 95 55 chr5 12752920 12753081 -186877069 + L1MC5 LINE L1 6738 6891 -1070 1336 201 15 96 chr5 12753081 12753478 -186876672 + MLT1A1 LTR MaLR 1 365 0 1715 257 95 55 chr5 12753478 12753662 -186876488 + L1MC5 LINE L1 6891 7209 -752 287 190 130 60 chr5 12753708 12753761 -186876389 + MER58C DNA MER1_type 91 139 -2281 2183 121 32 27 chr5 12753761 12754134 -186876016 - THE1C LTR MaLR 0 375 1 287 190 130 60 chr5 12754134 12754180 -186875970 + MER58C DNA MER1_type 139 197 -18 257 287 90 42 chr5 12754384 12754551 -186875599 + LTR16A1 LTR ERVL 270 444 -13 203 176 0 0 chr5 12755033 12755067 -186875083 + A-rich Low_complexity Low_complexity 1 34 0 2317 201 122 29 chr5 12756003 12756093 -186874057 - MER50 LTR ERV1 0 734 654 2234 121 0 0 chr5 12756093 12756398 -186873752 + AluSc SINE Alu 1 305 -4 2317 201 122 29 chr5 12756398 12756970 -186873180 - MER50 LTR ERV1 -80 654 10 187 293 43 86 chr5 12756980 12757260 -186872890 - L2 LINE L2 -180 3092 2825 2130 156 18 8 chr5 12757374 12757759 -186872391 - MLT1B LTR MaLR 0 390 2 23 0 0 0 chr5 12758189 12758212 -186871938 + AT_rich Low_complexity Low_complexity 1 23 0 255 352 0 0 chr5 12758515 12758603 -186871547 + MIR SINE MIR 170 257 -5 1269 272 115 29 chr5 12758663 12758856 -186871294 + MLT1L LTR MaLR 5 180 -435 1642 187 169 26 chr5 12758856 12759240 -186870910 + MLT2B1 LTR ERVL 1 461 -59 180 77 0 0 chr5 12759240 12759266 -186870884 + (CA)n Simple_repeat Simple_repeat 2 27 0 1642 187 169 26 chr5 12759266 12759336 -186870814 + MLT2B1 LTR ERVL 461 520 0 1269 272 115 29 chr5 12759336 12759700 -186870450 + MLT1L LTR MaLR 180 610 -5 244 343 18 41 chr5 12760304 12760473 -186869677 - MIR SINE MIR -50 212 48 2248 93 0 0 chr5 12761055 12761333 -186868817 + AluSx SINE Alu 1 278 -34 1396 131 0 0 chr5 12761864 12762063 -186868087 - AluSg/x SINE Alu -3 307 109 263 156 22 0 chr5 12762958 12763003 -186867147 + MER106B DNA MER1_type 2 47 -1012 609 194 25 50 chr5 12763059 12763219 -186866931 + MER106B DNA MER1_type 904 1059 0 423 163 175 50 chr5 12763539 12763699 -186866451 - MER104 DNA MER2_type 0 180 1 390 252 0 10 chr5 12763800 12763903 -186866247 - MIR SINE MIR -107 155 54 3512 155 18 8 chr5 12764217 12764830 -186865320 - L1MA5 LINE L1 -26 6274 5656 474 18 0 0 chr5 12764831 12764886 -186865264 + (TG)n Simple_repeat Simple_repeat 2 56 0 1161 191 65 0 chr5 12764886 12765101 -186865049 - AluJo SINE Alu -25 287 59 1006 132 13 0 chr5 12765103 12765255 -186864895 - L1MA5 LINE L1 -636 5667 5514 642 53 0 0 chr5 12765255 12765331 -186864819 + AluY SINE Alu 75 150 -161 1875 24 0 0 chr5 12765332 12765541 -186864609 + L1P LINE L1 4047 4255 -1891 * 27274 80 5 7 chr5 12765538 12767880 -186862270 - L1P LINE L1 -2529 3617 1284 2482 72 0 0 chr5 12767880 12768173 -186861977 + AluY SINE Alu 1 293 -18 27274 80 5 7 chr5 12768173 12769425 -186860725 - L1P LINE L1 -4862 1284 31 3733 199 60 7 chr5 12769430 12770185 -186859965 - L1M2b LINE L1 -6414 795 1 195 313 52 42 chr5 12770242 12770338 -186859812 + MIR SINE MIR 38 134 -74 647 265 11 42 chr5 12771669 12771858 -186858292 - MER63A DNA MER1_type -14 196 14 527 316 0 37 chr5 12772047 12772234 -186857916 + (TG)n Simple_repeat Simple_repeat 1 180 0 512 288 45 5 chr5 12772880 12773081 -186857069 - MIR SINE MIR -22 240 33 2271 85 0 0 chr5 12774418 12774723 -186855427 + AluY SINE Alu 1 305 0 867 245 42 0 chr5 12774946 12775158 -186854992 - MER58A DNA MER1_type 0 224 4 854 208 38 6 chr5 12776431 12776614 -186853536 - MER5A DNA MER1_type 0 189 1 926 237 37 0 chr5 12776623 12776838 -186853312 - MER58A DNA MER1_type -1 223 1 259 226 216 10 chr5 12777173 12777275 -186852875 + L2 LINE L2 3190 3312 -1 1105 189 77 6 chr5 12777747 12778070 -186852080 + L1MB1 LINE L1 5733 6168 0 280 98 0 5 chr5 12778708 12778746 -186851404 - MLT2C1 LTR ERVL -2 395 369 351 0 0 0 chr5 12778746 12778785 -186851365 + (TG)n Simple_repeat Simple_repeat 1 39 0 280 98 0 5 chr5 12778785 12778797 -186851353 - MLT2C1 LTR ERVL -28 369 358 287 152 14 0 chr5 12778802 12778876 -186851274 - MLT2D LTR ERVL -19 445 321 994 211 0 5 chr5 12778882 12779086 -186851064 - MLT2D LTR ERVL -211 203 1 568 198 62 68 chr5 12780175 12780352 -186849798 + L1MC3 LINE L1 7248 7423 -362 230 272 0 43 chr5 12780389 12780481 -186849669 + L1ME4a LINE L1 5970 6057 -64 23 68 0 0 chr5 12780514 12780558 -186849592 + AT_rich Low_complexity Low_complexity 1 44 0 210 224 0 0 chr5 12781269 12781318 -186848832 + (TG)n Simple_repeat Simple_repeat 2 50 0 2104 140 81 21 chr5 12781547 12781919 -186848231 - MSTD LTR MaLR 0 396 3 325 267 19 29 chr5 12782363 12782468 -186847682 - MIR SINE MIR -75 187 84 1410 170 0 44 chr5 12782592 12782863 -186847287 + AluSx SINE Alu 54 312 0 584 278 188 39 chr5 12783441 12783714 -186846436 - L2 LINE L2 -15 3298 3067 1739 183 65 3 chr5 12783714 12784037 -186846113 - MER61A LTR ERV1 0 343 1 584 278 188 39 chr5 12784037 12784183 -186845967 - L2 LINE L2 -246 3067 2791 471 305 60 60 chr5 12784243 12784594 -186845556 - MLT1J LTR MaLR -67 444 94 3992 135 44 44 chr5 12784815 12785524 -186844626 - MER50 LTR ERV1 -23 711 3 779 221 32 40 chr5 12785697 12785946 -186844204 - HsTC2 DNA Tc2 -7 1891 1645 226 237 0 51 chr5 12786033 12786092 -186844058 - HsTC2 DNA Tc2 -1748 150 95 575 287 106 56 chr5 12786327 12786828 -186843322 - L2 LINE L2 -1034 2280 1755 2473 151 121 29 chr5 12787006 12787561 -186842589 - MER4B LTR ERV1 -4 606 1 220 283 33 0 chr5 12787920 12787980 -186842170 + C-rich Low_complexity Low_complexity 5 66 0 303 28 0 0 chr5 12787980 12788016 -186842134 + (CCCCCG)n Simple_repeat Simple_repeat 1 36 0 23 0 0 0 chr5 12788143 12788166 -186841984 + GC_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 12788192 12788222 -186841928 + GC_rich Low_complexity Low_complexity 1 30 0 29 47 0 0 chr5 12788442 12788485 -186841665 + GC_rich Low_complexity Low_complexity 1 43 0 2259 103 0 13 chr5 12789348 12789658 -186840492 + AluSx SINE Alu 1 306 -6 1926 118 15 0 chr5 12790202 12790465 -186839685 - AluSx SINE Alu -12 300 34 185 269 0 45 chr5 12790668 12790735 -186839415 + MIR3 SINE MIR 92 155 -53 21 0 0 0 chr5 12791175 12791196 -186838954 + AT_rich Low_complexity Low_complexity 1 21 0 231 203 47 0 chr5 12791708 12791772 -186838378 - MIR SINE MIR -14 248 182 2072 122 3 3 chr5 12791829 12792123 -186838027 + AluSq SINE Alu 1 294 -19 1713 167 27 10 chr5 12793244 12793537 -186836613 - AluJb SINE Alu -14 298 1 267 140 53 18 chr5 12793733 12793790 -186836360 - MLT1J2 LTR MaLR -23 427 369 1944 140 48 70 chr5 12793950 12794364 -186835786 - MLT1D LTR MaLR -3 502 98 246 225 0 70 chr5 12794411 12794482 -186835668 - MLT1D LTR MaLR -517 109 44 476 278 50 22 chr5 12796510 12796690 -186833460 - MIR SINE MIR 0 262 78 231 257 0 0 chr5 12796690 12796764 -186833386 + (CA)n Simple_repeat Simple_repeat 1 74 0 254 200 27 80 chr5 12796764 12796839 -186833311 - MIR SINE MIR -136 72 2 1749 178 39 21 chr5 12797451 12797834 -186832316 - MLT1B LTR MaLR 0 390 1 642 305 147 32 chr5 12798279 12798873 -186831277 + L1MEd LINE L1 350 1011 -5108 180 344 120 8 chr5 12799399 12799524 -186830626 - MIR SINE MIR -79 183 45 180 0 0 0 chr5 12799638 12799658 -186830492 + (A)n Simple_repeat Simple_repeat 1 20 0 321 326 34 7 chr5 12799658 12799805 -186830345 - MER103 DNA DNA 0 166 16 3602 191 56 3 chr5 12799842 12800591 -186829559 + L1MB7 LINE L1 5395 6183 -1 325 322 54 13 chr5 12802307 12802456 -186827694 - MIR SINE MIR -60 202 48 2150 108 0 3 chr5 12802775 12803080 -186827070 + AluSx SINE Alu 3 306 -6 256 211 135 0 chr5 12803299 12803351 -186826799 - MER46C DNA MER2_type -86 252 194 298 272 117 0 chr5 12803403 12803506 -186826644 - MER46C DNA MER2_type -223 115 1 319 273 28 128 chr5 12804291 12804580 -186825570 - MIR SINE MIR 0 262 3 427 318 95 14 chr5 12804585 12804796 -186825354 - MIR SINE MIR -17 245 18 4205 211 47 75 chr5 12805843 12806439 -186823711 + L1MC4a LINE L1 5974 6585 -1223 309 51 0 0 chr5 12806439 12806478 -186823672 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 4205 211 47 75 chr5 12806478 12806856 -186823294 + L1MC4a LINE L1 6585 6904 -904 2092 99 27 0 chr5 12806856 12807150 -186823000 - AluSq SINE Alu -11 302 1 4205 211 47 75 chr5 12807150 12807495 -186822655 + L1MC4a LINE L1 6904 7257 -551 837 231 29 63 chr5 12807501 12807739 -186822411 + MER82 DNA MER2_type 424 653 0 232 175 0 0 chr5 12807740 12807780 -186822370 + MER58 DNA MER1_type 2378 2417 -3 1567 278 118 50 chr5 12807784 12807920 -186822230 - L1MCc LINE L1 -4355 2767 2642 727 204 22 113 chr5 12807920 12808042 -186822108 + MER63A DNA MER1_type 2 95 -1593 1723 171 0 7 chr5 12808042 12808334 -186821816 - AluJb SINE Alu -22 290 1 727 204 22 113 chr5 12808334 12808441 -186821709 + MER63A DNA MER1_type 95 210 0 1567 278 118 50 chr5 12808441 12809582 -186820568 - L1MCc LINE L1 -4480 2642 1195 297 0 0 0 chr5 12809582 12809615 -186820535 + (TG)n Simple_repeat Simple_repeat 1 33 0 1567 278 118 50 chr5 12809615 12809813 -186820337 - L1MCc LINE L1 -5927 1195 1012 2819 221 67 54 chr5 12810025 12810172 -186819978 - L1MC3 LINE L1 0 8042 7898 2261 100 0 0 chr5 12810172 12810482 -186819668 - AluY SINE Alu -1 310 1 2819 221 67 54 chr5 12810482 12811191 -186818959 - L1MC3 LINE L1 -144 7898 7179 2190 155 52 47 chr5 12811191 12811656 -186818494 - MLT1C LTR MaLR 0 467 1 2819 221 67 54 chr5 12811656 12811674 -186818476 - L1MC3 LINE L1 -863 7179 7163 2238 99 3 3 chr5 12812027 12812339 -186817811 - AluSx SINE Alu 0 312 1 1949 177 88 18 chr5 12813104 12813538 -186816612 - MLT1C LTR MaLR -3 464 1 475 209 73 47 chr5 12813739 12813930 -186816220 - Charlie7 DNA MER1_type 0 2612 2417 * 972 215 85 38 chr5 12813923 12814263 -186815887 - Charlie7 DNA MER1_type -1891 721 366 279 159 14 29 chr5 12814489 12814558 -186815592 - Charlie7 DNA MER1_type -2462 150 83 233 280 149 47 chr5 12815849 12815956 -186814194 - MIR3 SINE MIR -3 205 88 2778 161 36 6 chr5 12816037 12816195 -186813955 + L1MB2 LINE L1 5632 5784 -387 474 18 0 0 chr5 12816195 12816250 -186813900 + (CA)n Simple_repeat Simple_repeat 2 56 0 2778 161 36 6 chr5 12816250 12816612 -186813538 + L1MB2 LINE L1 5784 6168 -3 2912 172 61 19 chr5 12816640 12817228 -186812922 + L1MB5 LINE L1 5562 6174 0 344 243 168 23 chr5 12817553 12817726 -186812424 - MLT1L LTR MaLR -240 375 178 361 349 47 31 chr5 12819127 12819319 -186810831 - L2 LINE L2 0 3313 3119 200 205 0 0 chr5 12820551 12820590 -186809560 + CT-rich Low_complexity Low_complexity 1 39 0 2137 131 6 50 chr5 12821301 12821661 -186808489 - MER2 DNA MER2_type 0 344 1 182 258 76 91 chr5 12821667 12821865 -186808285 + L2 LINE L2 2312 2506 -808 374 280 88 102 chr5 12822207 12822729 -186807421 + LTR40b LTR ERVL 3 460 -2 346 271 205 7 chr5 12822887 12823038 -186807112 - MER5A DNA MER1_type -7 182 2 284 291 122 58 chr5 12823459 12823648 -186806502 - MIR SINE MIR -48 214 14 194 208 75 0 chr5 12824887 12824940 -186805210 + MIR SINE MIR 81 137 -125 186 324 95 0 chr5 12825989 12826063 -186804087 + MIR SINE MIR 23 103 -105 371 237 54 0 chr5 12826768 12826880 -186803270 - L1MC3 LINE L1 -1139 6703 6571 * 390 204 45 9 chr5 12826780 12826891 -186803259 + L1MC4 LINE L1 1995 6983 -1339 2866 92 25 10 chr5 12826903 12827296 -186802854 - MLT2A1 LTR ERVL -45 399 1 14079 67 19 8 chr5 12827296 12829068 -186801082 - HERVL-A1 LTR ERVL 0 5654 3865 1234 72 0 0 chr5 12829067 12829219 -186800931 + HERVL LTR ERVL 3394 3545 -2109 * 444 80 93 40 chr5 12829216 12829291 -186800859 - HERVL-A1 LTR ERVL -5371 283 205 * 19709 72 2 1 chr5 12829307 12831722 -186798428 - HERVL-A1 LTR ERVL -1775 3879 1462 6856 62 7 2 chr5 12831721 12832571 -186797579 - HERVL-A1 LTR ERVL -4800 854 1 * 3086 76 25 36 chr5 12832571 12833020 -186797130 - MLT2A1 LTR ERVL 0 444 1 2353 132 43 31 chr5 12834360 12834783 -186795367 - MSTA LTR MaLR 0 428 1 907 230 104 77 chr5 12834899 12835264 -186794886 - Charlie4a DNA MER1_type -132 376 2 301 284 58 8 chr5 12835730 12835869 -186794281 + MIR SINE MIR 12 147 -61 246 293 0 61 chr5 12836258 12836335 -186793815 - Charlie4 DNA MER1_type -372 136 65 330 87 0 0 chr5 12836335 12836381 -186793769 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 246 293 0 61 chr5 12836381 12836402 -186793748 - Charlie4 DNA MER1_type -443 65 44 2254 145 26 0 chr5 12837064 12837416 -186792734 - MLT1B LTR MaLR 0 390 30 210 345 35 0 chr5 12839016 12839103 -186791047 + MIR SINE MIR 56 145 -63 311 277 122 34 chr5 12839380 12839528 -186790622 - MER5A DNA MER1_type -9 180 20 311 271 0 0 chr5 12840780 12840850 -186789300 - MER112 DNA MER1_type -8 252 183 728 169 0 6 chr5 12840934 12841094 -186789056 + (TG)n Simple_repeat Simple_repeat 2 160 0 243 161 21 140 chr5 12841097 12841190 -186788960 - MER112 DNA MER1_type -177 83 2 264 270 5 63 chr5 12841665 12841854 -186788296 + (CACAC)n Simple_repeat Simple_repeat 1 178 0 855 295 33 0 chr5 12842923 12843164 -186786986 + MIR SINE MIR 14 262 0 365 240 88 0 chr5 12844240 12844365 -186785785 + MER103 DNA DNA 24 159 -7 1011 225 51 0 chr5 12845054 12845290 -186784860 + MER46C DNA MER2_type 80 327 -11 211 321 95 12 chr5 12847190 12847274 -186782876 - L2 LINE L2 -15 3257 3167 360 242 11 11 chr5 12847595 12847690 -186782460 + MER94 DNA DNA 40 134 0 24 0 0 0 chr5 12847815 12847839 -186782311 + AT_rich Low_complexity Low_complexity 1 24 0 182 298 18 0 chr5 12848695 12848752 -186781398 + L2 LINE L2 3200 3257 -15 264 59 0 0 chr5 12850194 12850228 -186779922 + (TAGG)n Simple_repeat Simple_repeat 2 35 0 2296 138 122 9 chr5 12850229 12850655 -186779495 + MER101 LTR ERV1 1 474 0 225 0 0 0 chr5 12851096 12851121 -186779029 + (T)n Simple_repeat Simple_repeat 1 25 0 270 293 123 0 chr5 12852790 12852896 -186777254 - MIR SINE MIR -38 224 106 279 79 0 0 chr5 12854981 12855019 -186775131 + (TG)n Simple_repeat Simple_repeat 1 38 0 351 338 63 0 chr5 12855034 12855176 -186774974 - MIR SINE MIR -90 172 22 341 321 78 55 chr5 12855739 12855957 -186774193 + MIR SINE MIR 39 261 -1 297 75 0 0 chr5 12856250 12856290 -186773860 + (TG)n Simple_repeat Simple_repeat 2 41 0 344 243 243 5 chr5 12856706 12856895 -186773255 + L3 LINE CR1 1061 1294 -283 302 242 53 0 chr5 12857141 12857236 -186772914 + Charlie5 DNA MER1_type 2411 2510 -102 3600 168 58 30 chr5 12858371 12859080 -186771070 + L1MB3 LINE L1 5423 6151 -32 13896 117 31 18 chr5 12860831 12861188 -186768962 - Tigger1 DNA MER2_type 0 2418 2067 2196 137 0 13 chr5 12861188 12861503 -186768647 + AluSx SINE Alu 1 311 -1 13896 117 31 18 chr5 12861503 12863458 -186766692 - Tigger1 DNA MER2_type -351 2067 6 375 268 89 40 chr5 12864672 12864896 -186765254 + L1ME4a LINE L1 5804 6038 -83 1887 155 24 0 chr5 12865280 12865576 -186764574 + AluJo SINE Alu 1 303 -9 1594 224 46 30 chr5 12870944 12871404 -186758746 - MLT1C LTR MaLR 0 467 1 3517 145 55 66 chr5 12871800 12872613 -186757537 + L1MB8 LINE L1 5369 6172 -6 227 303 30 15 chr5 12872620 12872686 -186757464 - MIR SINE MIR -170 92 26 214 256 39 51 chr5 12874002 12874080 -186756070 - MIR SINE MIR -91 171 95 221 0 0 33 chr5 12876132 12876162 -186753988 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 198 0 0 0 chr5 12876325 12876347 -186753803 + (TG)n Simple_repeat Simple_repeat 2 23 0 1862 187 11 11 chr5 12876383 12876747 -186753403 - MLT2D LTR ERVL -45 369 6 347 167 0 17 chr5 12877277 12877337 -186752813 + MER20 DNA MER1_type 1 59 -160 222 280 97 0 chr5 12877939 12878032 -186752118 + L2 LINE L2 3159 3260 -12 251 261 23 51 chr5 12879144 12879320 -186750830 + (CCGCG)n Simple_repeat Simple_repeat 4 174 0 251 261 23 51 chr5 12879485 12879661 -186750489 + (CCGCG)n Simple_repeat Simple_repeat 4 174 0 342 0 0 0 chr5 12881208 12881246 -186748904 + (TG)n Simple_repeat Simple_repeat 2 39 0 757 203 13 48 chr5 12881603 12881830 -186748320 - MER20 DNA MER1_type 0 219 1 1669 182 10 26 chr5 12882040 12882342 -186747808 - AluJo SINE Alu -15 297 1 2186 131 13 0 chr5 12883916 12884214 -186745936 + AluSx SINE Alu 1 302 -10 276 278 208 17 chr5 12884425 12884598 -186745552 + MIR SINE MIR 1 206 -56 1916 232 44 3 chr5 12884609 12885263 -186744887 + L1MC3 LINE L1 7051 7785 0 2361 100 3 0 chr5 12885273 12885574 -186744576 + AluSc SINE Alu 1 302 -7 2337 98 0 16 chr5 12885584 12885901 -186744249 + AluSx SINE Alu 1 312 0 3706 165 19 15 chr5 12886504 12887221 -186742929 + MER72 LTR ERV1 2 721 -1 1834 123 155 37 chr5 12887393 12887774 -186742376 + MER39B LTR ERV1 1 426 -227 1112 141 12 0 chr5 12887774 12887944 -186742206 - AluSg/x SINE Alu -4 308 137 1026 152 20 50 chr5 12887945 12888143 -186742007 + MER39B LTR ERV1 434 625 -28 382 354 125 12 chr5 12888707 12889301 -186740849 + L2 LINE L2 1867 2527 -787 395 182 0 0 chr5 12889306 12889372 -186740778 + AluJb SINE Alu 60 125 -177 196 316 152 38 chr5 12889452 12889768 -186740382 + L2 LINE L2 2626 2977 -337 584 136 32 136 chr5 12890033 12890188 -186739962 + AluJo SINE Alu 5 143 -169 2364 89 0 3 chr5 12890189 12890480 -186739670 + AluSq SINE Alu 1 290 -23 340 332 40 15 chr5 12891821 12892023 -186738127 + MLT1L LTR MaLR 188 394 -221 194 289 13 26 chr5 12892966 12893042 -186737108 - L2 LINE L2 -9 3304 3230 601 246 7 0 chr5 12893700 12893842 -186736308 + MER5A DNA MER1_type 7 149 -40 219 196 0 36 chr5 12894217 12894241 -186735909 + GA-rich Low_complexity Low_complexity 2 25 -30 2253 131 0 0 chr5 12894241 12894553 -186735597 + AluSx SINE Alu 1 312 0 219 196 0 36 chr5 12894553 12894584 -186735566 + GA-rich Low_complexity Low_complexity 25 55 0 644 249 35 0 chr5 12895047 12895216 -186734934 + MLT1A1 LTR MaLR 1 175 -190 189 121 0 0 chr5 12895849 12895882 -186734268 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 1198 143 36 41 chr5 12896571 12896889 -186733261 - MLT1A2 LTR MaLR -11 363 1 606 230 142 13 chr5 12896897 12897123 -186733027 + LTR37B LTR ERV1 210 464 -4 1773 286 163 11 chr5 12897129 12898001 -186732149 + L1MC4a LINE L1 6422 7425 -383 1010 310 138 20 chr5 12900512 12901452 -186728698 - L2 LINE L2 -14 3299 2241 1141 183 34 16 chr5 12901493 12901773 -186728377 + MLT1A1 LTR MaLR 36 345 -51 443 189 95 0 chr5 12901773 12901868 -186728282 + MLT1A1 LTR MaLR 260 363 -2 2228 121 10 0 chr5 12902087 12902385 -186727765 - AluSq SINE Alu -12 301 1 370 335 23 36 chr5 12903094 12903395 -186726755 - L1ME4a LINE L1 -240 5881 5585 2315 108 3 0 chr5 12903769 12904065 -186726085 - AluSq SINE Alu -16 297 1 717 170 0 0 chr5 12904100 12904206 -186725944 + FLAM_C SINE Alu 2 107 -36 1742 196 54 39 chr5 12904265 12904643 -186725507 + MLT2D LTR ERVL 1 387 -27 324 0 0 0 chr5 12904643 12904679 -186725471 + (CA)n Simple_repeat Simple_repeat 2 37 0 1742 196 54 39 chr5 12904679 12904708 -186725442 + MLT2D LTR ERVL 387 414 0 2233 98 0 3 chr5 12904755 12905041 -186725109 - AluSc SINE Alu -14 295 11 1768 67 0 27 chr5 12905165 12905388 -186724762 + AluY SINE Alu 86 302 -9 1991 160 83 3 chr5 12906140 12906478 -186723672 + MLT1A1 LTR MaLR 1 365 0 2110 101 7 0 chr5 12907602 12907903 -186722247 - AluSq SINE Alu 0 307 5 1074 171 63 15 chr5 12908207 12908412 -186721738 - MER20 DNA MER1_type -4 215 1 528 304 69 11 chr5 12908444 12908734 -186721416 - L1ME4a LINE L1 -658 5584 5285 2136 152 0 0 chr5 12908734 12909043 -186721107 - AluSx SINE Alu -3 309 1 528 304 69 11 chr5 12909043 12909061 -186721089 - L1ME4a LINE L1 -957 5285 5269 989 173 146 48 chr5 12909072 12909121 -186721029 - MER33 DNA MER1_type -2261 324 281 1757 144 47 0 chr5 12909121 12909399 -186720751 - AluJb SINE Alu -21 291 1 989 173 146 48 chr5 12909399 12909644 -186720506 - MER33 DNA MER1_type -2304 281 1 338 200 14 0 chr5 12909684 12909754 -186720396 + MER96 DNA MER1_type? 1 71 -104 2007 136 0 29 chr5 12910295 12910603 -186719547 - AluSx SINE Alu -13 299 1 887 270 58 52 chr5 12911133 12911496 -186718654 + MLT1I LTR MaLR 40 404 -5 1529 161 0 50 chr5 12911639 12911962 -186718188 + AluSq SINE Alu 1 307 -6 427 107 0 0 chr5 12912065 12912121 -186718029 - Alu SINE Alu -256 57 2 32 57 0 0 chr5 12912180 12912233 -186717917 + AT_rich Low_complexity Low_complexity 1 53 0 2361 116 0 0 chr5 12912746 12913057 -186717093 + AluSq SINE Alu 1 311 -2 2176 206 46 17 chr5 12913205 12913724 -186716426 + MLT1F LTR MaLR 1 534 -8 26 50 0 0 chr5 12913869 12913909 -186716241 + AT_rich Low_complexity Low_complexity 1 40 0 237 65 0 0 chr5 12914033 12914064 -186716086 + (T)n Simple_repeat Simple_repeat 1 31 0 2164 136 0 3 chr5 12914082 12914384 -186715766 + AluSx SINE Alu 1 301 -11 2344 88 10 0 chr5 12914384 12914678 -186715472 + AluSq SINE Alu 1 298 -15 21 36 0 0 chr5 12914690 12914718 -186715432 + AT_rich Low_complexity Low_complexity 1 28 0 2172 129 0 0 chr5 12915012 12915306 -186714844 + AluSx SINE Alu 1 294 -18 2094 138 0 3 chr5 12915461 12915759 -186714391 + AluJb SINE Alu 1 297 -15 490 167 0 0 chr5 12916213 12916297 -186713853 + MER5A DNA MER1_type 9 92 -97 2920 217 60 11 chr5 12917653 12918389 -186711761 + L1ME2 LINE L1 5384 6155 -9 3509 185 44 39 chr5 12918426 12919244 -186710906 + L1MB4 LINE L1 5358 6179 -1 1440 211 33 18 chr5 12919327 12919663 -186710487 + L1ME2 LINE L1 5814 6154 -10 850 168 8 0 chr5 12919672 12919803 -186710347 - FLAM_C SINE Alu 0 133 2 800 181 0 8 chr5 12919834 12919967 -186710183 + FLAM_C SINE Alu 1 132 -1 195 42 0 0 chr5 12919979 12920003 -186710147 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2290 126 0 0 chr5 12920008 12920318 -186709832 + AluSx SINE Alu 1 310 -2 737 196 0 0 chr5 12920712 12920865 -186709285 - L1P LINE L1 -3332 2814 2662 5322 169 9 3 chr5 12920977 12921960 -186708190 - L1P LINE L1 -3678 2468 1480 2477 107 26 31 chr5 12921961 12922352 -186707798 + L1PA11 LINE L1 5786 6174 0 616 226 16 45 chr5 12922894 12923242 -186706908 + MLT1C LTR MaLR 1 459 -8 2291 84 40 7 chr5 12923981 12924280 -186705870 + AluSp SINE Alu 1 309 -4 2011 95 21 67 chr5 12925844 12926171 -186703979 - AluSx SINE Alu 0 312 1 234 0 0 0 chr5 12926400 12926426 -186703724 + (CA)n Simple_repeat Simple_repeat 2 27 0 195 42 0 0 chr5 12926475 12926499 -186703651 + (CATA)n Simple_repeat Simple_repeat 2 25 0 334 296 48 48 chr5 12926671 12926857 -186703293 + L1MC/D LINE L1 5262 5447 -2548 927 194 0 7 chr5 12927039 12927331 -186702819 + (CAT)n Simple_repeat Simple_repeat 1 290 0 639 181 0 53 chr5 12927335 12927523 -186702627 + (CACCAT)n Simple_repeat Simple_repeat 2 179 0 455 250 276 0 chr5 12927555 12927707 -186702443 - MIR SINE MIR -11 251 58 687 295 83 32 chr5 12928319 12928750 -186701400 + MLT1J LTR MaLR 17 469 -42 513 340 25 0 chr5 12928751 12928910 -186701240 + MIR SINE MIR 5 167 -95 226 234 0 0 chr5 12929001 12929048 -186701102 + (ATG)n Simple_repeat Simple_repeat 2 48 0 1866 162 3 3 chr5 12929213 12929503 -186700647 + AluJb SINE Alu 1 290 -22 661 279 122 20 chr5 12930224 12930518 -186699632 + MER77 LTR ERV1 275 598 -7 1888 113 52 78 chr5 12931560 12931906 -186698244 - MER1B DNA MER1_type 0 337 1 39 60 0 0 chr5 12933289 12933356 -186696794 + AT_rich Low_complexity Low_complexity 1 67 0 311 220 93 34 chr5 12934264 12934382 -186695768 - MIR SINE MIR -115 147 23 410 341 153 27 chr5 12934646 12934980 -186695170 - L2 LINE L2 -416 2898 2523 1027 253 78 13 chr5 12935142 12935514 -186694636 + LTR53 LTR ERVL 94 489 -30 1123 248 68 42 chr5 12935612 12936067 -186694083 + MLT1C LTR MaLR 1 467 0 491 169 0 0 chr5 12936067 12936150 -186694000 - MER5A DNA MER1_type -103 86 4 236 240 27 77 chr5 12937912 12938095 -186692055 + L1MC4a LINE L1 5038 5211 -935 2237 88 58 0 chr5 12938173 12938468 -186691682 + AluSx SINE Alu 1 312 0 366 263 62 56 chr5 12938489 12938649 -186691501 + L1MC4a LINE L1 5287 5447 -2361 400 327 70 32 chr5 12938654 12938966 -186691184 + L1MC4a LINE L1 5505 5828 -1980 182 222 44 0 chr5 12945099 12945144 -186685006 - MER5B DNA MER1_type -2 176 130 223 83 21 42 chr5 12947271 12947319 -186682831 + (CCCCAG)n Simple_repeat Simple_repeat 2 48 0 22 35 0 0 chr5 12947610 12947639 -186682511 + GC_rich Low_complexity Low_complexity 1 29 0 1340 148 76 0 chr5 12948359 12948595 -186681555 - AluJo SINE Alu -58 254 1 2460 72 3 0 chr5 12948673 12948966 -186681184 - AluSp SINE Alu -19 294 1 2053 170 3 27 chr5 12949438 12949814 -186680336 + MLT2C1 LTR ERVL 1 367 -30 2086 117 3 17 chr5 12950035 12950334 -186679816 + AluSx SINE Alu 1 295 -17 1163 166 47 14 chr5 12951371 12951582 -186678568 - MER20 DNA MER1_type 0 219 2 323 162 33 61 chr5 12951849 12951967 -186678183 + MLT1L LTR MaLR 389 607 -8 441 236 73 48 chr5 12952468 12952633 -186677517 + LTR16C LTR ERVL 300 468 -23 2226 102 0 13 chr5 12953597 12953910 -186676240 - AluSx SINE Alu -3 309 1 1123 186 28 19 chr5 12954024 12954239 -186675911 + MER20 DNA MER1_type 1 217 -2 2114 127 0 0 chr5 12954241 12954549 -186675601 + AluSg SINE Alu 1 308 -2 446 301 60 4 chr5 12954738 12954982 -186675168 - MIR SINE MIR 0 262 8 328 261 58 87 chr5 12955774 12955915 -186674235 + L1MD3 LINE L1 7564 7697 -298 2306 74 7 7 chr5 12955915 12956224 -186673926 + AluSg SINE Alu 1 309 -1 328 261 58 87 chr5 12956224 12956323 -186673827 + L1MD3 LINE L1 7697 7797 -198 1495 191 79 9 chr5 12956371 12956712 -186673438 + MLT1A1 LTR MaLR 1 365 0 297 250 11 65 chr5 12956879 12956971 -186673179 - MIR SINE MIR -52 210 124 208 316 25 13 chr5 13057878 13057972 -186572178 + G-rich Low_complexity Low_complexity 2 100 -61 3068 51 11 0 chr5 13057972 13058323 -186571827 + THE1A LTR MaLR 1 355 0 208 316 25 13 chr5 13058323 13058386 -186571764 + G-rich Low_complexity Low_complexity 100 161 0 * 327 219 50 6 chr5 13058368 13058528 -186571622 + (TG)n Simple_repeat Simple_repeat 1 167 0 294 216 39 12 chr5 13058568 13058905 -186571245 + (TG)n Simple_repeat Simple_repeat 1 346 0 305 273 35 6 chr5 13058922 13059094 -186571056 + (TG)n Simple_repeat Simple_repeat 1 177 0 229 316 35 0 chr5 13059313 13059484 -186570666 + (TG)n Simple_repeat Simple_repeat 1 177 0 366 233 47 6 chr5 13059665 13059837 -186570313 + (TG)n Simple_repeat Simple_repeat 1 179 0 271 283 35 0 chr5 13059856 13060001 -186570149 + (TG)n Simple_repeat Simple_repeat 2 151 0 215 244 116 58 chr5 13060193 13060365 -186569785 - L2 LINE L2 -783 2531 2350 337 217 48 12 chr5 13060390 13060473 -186569677 - L2 LINE L2 -1 3271 3186 287 195 78 109 chr5 13060471 13060599 -186569551 + L2 LINE L2 3189 3312 -1 * 1742 151 177 45 chr5 13060614 13060992 -186569158 - MSTA LTR MaLR 0 428 1 3822 135 8 12 chr5 13060992 13061586 -186568564 - MSTA-int LTR MaLR 0 1580 989 1975 156 178 6 chr5 13061588 13061953 -186568197 + MSTA LTR MaLR 1 428 0 821 156 106 110 chr5 13062203 13062421 -186567729 + MER58A DNA MER1_type 4 220 -4 21 36 0 0 chr5 13062483 13062511 -186567639 + AT_rich Low_complexity Low_complexity 1 28 0 1825 202 14 16 chr5 13062554 13062920 -186567230 - MLT1A1 LTR MaLR 0 365 1 306 0 0 0 chr5 13063380 13063414 -186566736 + (CA)n Simple_repeat Simple_repeat 2 35 0 284 289 40 59 chr5 13063541 13063693 -186566457 - MARNA DNA Mariner -352 234 86 689 343 75 41 chr5 13064430 13065123 -186565027 + L2 LINE L2 2525 3248 -24 671 301 31 9 chr5 13065371 13065600 -186564550 + MIR SINE MIR 8 241 -21 183 42 0 0 chr5 13065744 13065768 -186564382 + (CAAG)n Simple_repeat Simple_repeat 3 26 0 318 169 96 36 chr5 13066145 13066228 -186563922 + MER69 DNA AcHobo 2430 2517 -9 194 105 26 0 chr5 13066302 13066340 -186563810 + (TG)n Simple_repeat Simple_repeat 2 40 0 242 29 29 0 chr5 13066375 13066410 -186563740 + (TG)n Simple_repeat Simple_repeat 2 37 0 344 50 0 0 chr5 13066526 13066566 -186563584 - THE1B LTR MaLR 0 355 316 2356 100 31 31 chr5 13066567 13066916 -186563234 - THE1B LTR MaLR -15 349 1 507 337 36 8 chr5 13067132 13067384 -186562766 - MIR SINE MIR -2 260 2 1923 112 28 11 chr5 13069398 13069649 -186560501 + AluSg SINE Alu 1 259 -51 207 0 0 0 chr5 13069649 13069672 -186560478 + (CAGCC)n Simple_repeat Simple_repeat 5 27 0 1923 112 28 11 chr5 13069672 13069705 -186560445 + AluSg SINE Alu 259 290 -20 913 142 32 53 chr5 13069962 13070152 -186559998 - MER53 DNA DNA -1 188 3 198 268 119 3 chr5 13071257 13071361 -186558789 + MIR SINE MIR 32 147 -101 21 0 0 0 chr5 13071754 13071775 -186558375 + AT_rich Low_complexity Low_complexity 1 21 0 542 259 114 15 chr5 13071791 13071992 -186558158 - MIR SINE MIR -40 222 2 1928 155 23 0 chr5 13072245 13072548 -186557602 + AluJo SINE Alu 1 310 -2 4755 206 102 36 chr5 13072979 13073720 -186556430 - Charlie1a DNA MER1_type -1307 1454 764 14558 35 1 0 chr5 13073720 13076137 -186554013 - L1PA4 LINE L1 -1 6154 3737 4755 206 102 36 chr5 13076137 13076752 -186553398 - Charlie1a DNA MER1_type -1997 764 8 291 270 6 103 chr5 13077560 13077734 -186552416 + MIR SINE MIR 78 234 -28 1804 176 91 38 chr5 13077760 13077951 -186552199 - MLT1C LTR MaLR -47 420 241 2336 134 27 24 chr5 13077951 13078325 -186551825 - THE1C LTR MaLR 0 375 1 1804 176 91 38 chr5 13078325 13078530 -186551620 - MLT1C LTR MaLR -226 241 3 180 282 30 92 chr5 13078630 13078761 -186551389 - L2 LINE L2 -843 2471 2349 213 217 0 0 chr5 13078900 13078946 -186551204 - L2 LINE L2 -1 3312 3267 22 35 0 0 chr5 13079433 13079462 -186550688 + AT_rich Low_complexity Low_complexity 1 29 0 237 281 99 53 chr5 13080754 13080925 -186549225 + MLT1K LTR MaLR 169 347 -241 210 306 16 0 chr5 13081467 13081529 -186548621 - L2 LINE L2 -29 3243 3181 282 167 0 0 chr5 13081852 13081912 -186548238 + T-rich Low_complexity Low_complexity 1 60 0 2087 143 74 52 chr5 13083206 13083611 -186546539 - MLT2D LTR ERVL 0 414 1 706 296 91 32 chr5 13083654 13084118 -186546032 - L1ME2 LINE L1 -278 5886 5384 313 331 111 12 chr5 13084192 13084364 -186545786 + MIR SINE MIR 33 221 -41 241 244 79 8 chr5 13084557 13084684 -186545466 - L1ME2 LINE L1 -1090 5056 4921 1715 172 79 70 chr5 13085415 13085856 -186544294 - MER31B LTR ERV1 -21 445 1 4046 89 30 2 chr5 13086002 13086539 -186543611 + L1PA10 LINE L1 5616 6167 -1 2392 107 0 0 chr5 13087107 13087417 -186542733 - AluSg SINE Alu 0 310 1 202 265 0 0 chr5 13088495 13088544 -186541606 - L2 LINE L2 -18 3295 3247 730 175 95 31 chr5 13088655 13088875 -186541275 + MLT1G1 LTR MaLR 270 487 -18 2039 175 25 48 chr5 13088875 13089274 -186540876 + MLT1B LTR MaLR 1 390 0 730 175 95 31 chr5 13089274 13089286 -186540864 + MLT1G1 LTR MaLR 487 497 -8 1412 213 37 48 chr5 13090122 13090498 -186539652 + MLT1A2 LTR MaLR 3 374 0 911 279 174 42 chr5 13090728 13090769 -186539381 - L2 LINE L2 -526 2788 2754 2829 119 21 26 chr5 13090769 13091196 -186538954 + MSTA LTR MaLR 1 425 -3 911 279 174 42 chr5 13091196 13091660 -186538490 - L2 LINE L2 -560 2754 2216 350 285 39 23 chr5 13091663 13091793 -186538357 - MER94 DNA DNA -2 132 1 620 215 93 9 chr5 13091808 13092022 -186538128 - L2 LINE L2 -1102 2212 1981 288 269 52 30 chr5 13092022 13092156 -186537994 + L2 LINE L2 2119 2255 -1059 368 266 221 16 chr5 13092230 13092474 -186537676 + L2 LINE L2 3020 3313 0 1871 146 11 0 chr5 13092980 13093298 -186536852 + AluSx SINE Alu 1 321 0 21 0 0 0 chr5 13093400 13093421 -186536729 + AT_rich Low_complexity Low_complexity 1 21 0 1457 235 43 56 chr5 13093742 13094210 -186535940 - MLT1C LTR MaLR 0 467 6 678 225 89 0 chr5 13094230 13094443 -186535707 - L2 LINE L2 -1102 2212 1981 304 261 52 30 chr5 13094443 13094577 -186535573 + L2 LINE L2 2119 2255 -1059 857 231 18 27 chr5 13095463 13095688 -186534462 + MIR SINE MIR 15 237 -25 22 35 0 0 chr5 13097528 13097557 -186532593 + AT_rich Low_complexity Low_complexity 1 29 0 1705 178 68 22 chr5 13097575 13097940 -186532210 - MER58D DNA MER1_type -3 383 2 32 57 0 0 chr5 13098750 13098803 -186531347 + AT_rich Low_complexity Low_complexity 1 53 0 403 229 18 9 chr5 13099520 13099629 -186530521 - MER112 DNA MER1_type -12 248 139 647 311 18 5 chr5 13101551 13101770 -186528380 - MIR SINE MIR -38 224 3 1768 150 0 64 chr5 13102168 13102495 -186527655 - AluSx SINE Alu -4 308 3 2338 86 0 0 chr5 13103619 13103911 -186526239 + AluSx SINE Alu 1 292 -20 2288 99 0 19 chr5 13104788 13105100 -186525050 + AluSg SINE Alu 1 306 -4 1873 158 0 10 chr5 13105847 13106151 -186523999 - AluSx SINE Alu -11 301 1 249 365 48 12 chr5 13106198 13106365 -186523785 + MIR SINE MIR 1 173 -89 524 212 0 0 chr5 13106375 13106460 -186523690 + MER58A DNA MER1_type 7 91 -16 630 162 52 15 chr5 13106466 13106602 -186523548 - MLT1C LTR MaLR -326 141 1 453 306 115 25 chr5 13106745 13107023 -186523127 + L3 LINE CR1 882 1184 -393 282 95 0 0 chr5 13107265 13107307 -186522843 + (CA)n Simple_repeat Simple_repeat 1 42 0 341 284 58 0 chr5 13107308 13107463 -186522687 - L1ME4a LINE L1 -201 5920 5757 2609 68 0 0 chr5 13108002 13108313 -186521837 - AluY SINE Alu 0 311 1 1202 190 123 29 chr5 13108313 13108716 -186521434 - LTR54B LTR ERV1 -19 491 81 664 181 110 1 chr5 13110018 13110242 -186519908 + MSTD LTR MaLR 1 277 -119 437 258 131 28 chr5 13111167 13111488 -186518662 - MLT1F LTR MaLR -15 527 231 775 172 0 0 chr5 13111532 13111654 -186518496 - MLT2C2 LTR ERVL -48 416 295 874 181 7 0 chr5 13111660 13111815 -186518335 - MLT2C1 LTR ERVL -215 182 27 2040 124 66 30 chr5 13113068 13113430 -186516720 + THE1C LTR MaLR 1 375 0 1223 190 14 23 chr5 13113763 13113984 -186516166 + MER20 DNA MER1_type 1 219 0 357 298 48 42 chr5 13114247 13114415 -186515735 - L2 LINE L2 -18 3295 3127 208 373 78 25 chr5 13114806 13115010 -186515140 - L2 LINE L2 -549 2765 2551 435 138 25 38 chr5 13115941 13116021 -186514129 - MER20 DNA MER1_type 0 219 141 2319 117 47 36 chr5 13117099 13117459 -186512691 - THE1B LTR MaLR 0 364 1 475 306 40 69 chr5 13118001 13118251 -186511899 + MIR SINE MIR 6 251 -11 27 29 0 0 chr5 13118803 13118837 -186511313 + AT_rich Low_complexity Low_complexity 1 34 0 1091 261 78 7 chr5 13119140 13119587 -186510563 + MER119 DNA MER1_type 6 581 -2 26 30 0 0 chr5 13119650 13119683 -186510467 + AT_rich Low_complexity Low_complexity 1 33 0 1972 156 3 0 chr5 13119954 13120249 -186509901 + AluJo SINE Alu 1 296 -16 258 32 0 0 chr5 13120249 13120280 -186509870 + (TA)n Simple_repeat Simple_repeat 1 31 0 * 378 0 0 0 chr5 13120279 13120321 -186509829 + (GA)n Simple_repeat Simple_repeat 2 43 0 1534 221 42 16 chr5 13121151 13121531 -186508619 + MER90 LTR ERV1 225 614 0 254 256 29 12 chr5 13122274 13122446 -186507704 + (TA)n Simple_repeat Simple_repeat 2 176 0 313 260 175 15 chr5 13123430 13123630 -186506520 + L2 LINE L2 2470 2701 -613 243 298 35 0 chr5 13123638 13123737 -186506413 - L1ME2 LINE L1 -10 6324 6065 382 268 159 78 chr5 13123738 13124119 -186506031 + L2 LINE L2 2690 3140 -173 1515 188 124 28 chr5 13124119 13124545 -186505605 - MLT1C LTR MaLR 0 467 1 382 268 159 78 chr5 13124545 13124665 -186505485 + L2 LINE L2 3140 3249 -64 1735 199 64 31 chr5 13125028 13125511 -186504639 - MLT1D LTR MaLR 0 505 7 2370 99 7 0 chr5 13126193 13126497 -186503653 + AluSx SINE Alu 1 306 -6 382 267 43 105 chr5 13127289 13127566 -186502584 - MIR SINE MIR -1 261 2 222 316 24 97 chr5 13127818 13128024 -186502126 - MIR SINE MIR -50 212 22 787 211 43 0 chr5 13128106 13128291 -186501859 - MER20 DNA MER1_type 0 219 27 224 204 0 56 chr5 13129489 13129543 -186500607 - L2 LINE L2 -546 2768 2718 465 143 41 21 chr5 13129597 13130076 -186500074 + (TG)n Simple_repeat Simple_repeat 1 488 0 619 114 39 16 chr5 13130136 13130446 -186499704 + (TG)n Simple_repeat Simple_repeat 1 317 0 738 105 35 0 chr5 13130479 13130651 -186499499 + (TG)n Simple_repeat Simple_repeat 2 179 0 203 190 0 35 chr5 13131043 13131101 -186499049 + (CAGGG)n Simple_repeat Simple_repeat 3 58 0 283 188 0 25 chr5 13132030 13132110 -186498040 + (TATATG)n Simple_repeat Simple_repeat 3 80 0 1128 143 0 30 chr5 13133130 13133298 -186496852 + FRAM SINE Alu 3 165 -1 2564 68 0 0 chr5 13133474 13133784 -186496366 + AluY SINE Alu 1 310 -1 916 204 82 0 chr5 13135087 13135283 -186494867 + MER20 DNA MER1_type 1 212 -7 1745 167 89 30 chr5 13135639 13136034 -186494116 - LTR52 LTR ERVL -3 418 1 428 308 62 7 chr5 13136297 13136443 -186493707 + MIR SINE MIR 61 214 -48 333 229 0 0 chr5 13136536 13136641 -186493509 + (TG)n Simple_repeat Simple_repeat 1 105 0 309 89 0 0 chr5 13137034 13137079 -186493071 + (CA)n Simple_repeat Simple_repeat 1 45 0 2088 127 63 30 chr5 13137628 13137991 -186492159 - THE1C LTR MaLR 0 375 1 10844 118 31 12 chr5 13137991 13139541 -186490609 - THE1C-int LTR MaLR 0 1580 1 1446 144 137 13 chr5 13139542 13139841 -186490309 - THE1C LTR MaLR -39 336 1 2922 13 0 0 chr5 13140410 13140724 -186489426 - L1PA2 LINE L1 -1 6154 5841 186 133 0 0 chr5 13140960 13140990 -186489160 + (TATATG)n Simple_repeat Simple_repeat 5 34 0 381 188 0 0 chr5 13141033 13141118 -186489032 + (TA)n Simple_repeat Simple_repeat 2 86 0 240 35 0 0 chr5 13141118 13141147 -186489003 + (CA)n Simple_repeat Simple_repeat 2 30 0 929 193 6 11 chr5 13141253 13141429 -186488721 - AluJo SINE Alu -16 296 122 1913 144 21 0 chr5 13142010 13142301 -186487849 + AluJo SINE Alu 1 297 -15 2129 112 3 40 chr5 13142410 13142731 -186487419 - AluSx SINE Alu -3 309 1 518 223 0 25 chr5 13143371 13143492 -186486658 + MIR SINE MIR 23 140 -122 606 276 190 41 chr5 13143881 13144009 -186486141 - L2 LINE L2 0 3313 3205 2578 138 14 8 chr5 13144009 13144371 -186485779 + THE1B LTR MaLR 1 364 0 606 276 190 41 chr5 13144371 13144591 -186485559 - L2 LINE L2 -108 3205 3019 1269 240 88 30 chr5 13144591 13145032 -186485118 - MLT1C LTR MaLR 0 467 1 606 276 190 41 chr5 13145032 13145145 -186485005 - L2 LINE L2 -294 3019 2788 1788 170 7 0 chr5 13147974 13148263 -186481887 - AluJb SINE Alu -17 295 5 1404 209 109 6 chr5 13151009 13151320 -186478830 - MLT1D LTR MaLR -162 343 1 425 120 43 0 chr5 13152713 13152805 -186477345 + GA-rich Low_complexity Low_complexity 3 98 0 296 264 76 69 chr5 13152937 13153081 -186477069 + MER70-int LTR ERVL 1946 2090 -2933 1648 207 45 73 chr5 13154068 13154587 -186475563 - MLT1D LTR MaLR 0 624 2 489 317 18 23 chr5 13155703 13155924 -186474226 - L2 LINE L2 -19 3294 3075 444 288 86 56 chr5 13156014 13156247 -186473903 - L2 LINE L2 -405 2909 2670 268 230 11 23 chr5 13156893 13156980 -186473170 + (TA)n Simple_repeat Simple_repeat 1 86 0 31 0 0 0 chr5 13158849 13158880 -186471270 + AT_rich Low_complexity Low_complexity 1 31 0 297 349 137 11 chr5 13159222 13159397 -186470753 + L2 LINE L2 2440 2636 -678 252 272 12 0 chr5 13159708 13159789 -186470361 - MER69 DNA AcHobo -11 2515 2434 1872 155 30 3 chr5 13160365 13160662 -186469488 - AluSx SINE Alu -3 309 5 2048 78 8 0 chr5 13160849 13161107 -186469043 - AluY SINE Alu -9 302 43 523 273 45 27 chr5 13161394 13161727 -186468423 - L1M4 LINE L1 -1310 4836 4498 327 218 24 9 chr5 13161809 13161923 -186468227 + L1ME LINE L1 5384 5496 -670 534 317 128 38 chr5 13162098 13162940 -186467210 - L1 LINE L1 -1111 5035 4110 2844 78 3 0 chr5 13163392 13163776 -186466374 - L1PA7 LINE L1 0 6154 5770 231 310 178 8 chr5 13164739 13164868 -186465282 - MIR SINE MIR -23 239 89 201 164 16 33 chr5 13165549 13165610 -186464540 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 787 145 0 0 chr5 13167115 13167232 -186462918 + FLAM_C SINE Alu 1 117 -16 707 67 0 0 chr5 13167239 13167358 -186462792 + AluSg/x SINE Alu 193 311 0 2422 105 0 0 chr5 13167685 13167998 -186462152 + AluSq SINE Alu 1 313 0 252 0 0 0 chr5 13169379 13169407 -186460743 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 474 248 113 89 chr5 13169500 13169802 -186460348 - L2 LINE L2 -1 3312 3004 2515 64 0 3 chr5 13169811 13170123 -186460027 + AluY SINE Alu 1 311 0 23 0 0 0 chr5 13171351 13171374 -186458776 + AT_rich Low_complexity Low_complexity 1 23 0 240 238 99 50 chr5 13171868 13171969 -186458181 + MIR SINE MIR 135 240 -22 366 226 254 17 chr5 13175361 13175542 -186454608 - HAL1 LINE L1 -725 1782 1559 556 268 67 87 chr5 13175623 13176254 -186453896 - HAL1 LINE L1 -1156 1351 734 1639 227 29 48 chr5 13177918 13178433 -186451717 - MLT1D LTR MaLR 0 505 1 682 281 107 31 chr5 13178712 13179320 -186450830 - MLT2F LTR ERVL -8 655 2 749 209 44 11 chr5 13179968 13180150 -186450000 - MER58A DNA MER1_type 0 224 37 250 256 0 37 chr5 13180983 13181022 -186449128 - L2 LINE L2 0 3313 3274 2238 166 26 16 chr5 13181022 13181451 -186448699 - Tigger2a DNA MER2_type -1 433 1 250 256 0 37 chr5 13181451 13181493 -186448657 - L2 LINE L2 -39 3274 3235 405 216 35 26 chr5 13181745 13181861 -186448289 - L2 LINE L2 -96 3217 3101 232 237 41 52 chr5 13181933 13182030 -186448120 - MLT1J LTR MaLR -58 453 358 6201 92 8 3 chr5 13182160 13183538 -186446612 - L1PA10 LINE L1 -2 6166 4789 28 0 0 0 chr5 13184359 13184387 -186445763 + AT_rich Low_complexity Low_complexity 1 28 0 559 309 78 9 chr5 13185124 13185341 -186444809 - MIR SINE MIR -2 260 29 383 240 12 29 chr5 13185371 13185542 -186444608 + L1ME LINE L1 5135 5302 -844 572 291 97 15 chr5 13185600 13185992 -186444158 + L1ME LINE L1 5350 5773 -397 2319 123 5 46 chr5 13186018 13186191 -186443959 + HSMAR2 DNA Mariner 2 181 -1121 2213 95 3 0 chr5 13186191 13186510 -186443640 + AluSp SINE Alu 1 320 0 2319 123 5 46 chr5 13186510 13186751 -186443399 + HSMAR2 DNA Mariner 181 400 -902 402 100 29 0 chr5 13186785 13186855 -186443295 + HSMAR2 DNA Mariner 1230 1301 -1 291 157 0 0 chr5 13187067 13187137 -186443013 + (TA)n Simple_repeat Simple_repeat 1 70 0 2076 128 3 3 chr5 13188112 13188417 -186441733 + AluSg SINE Alu 1 305 -5 472 288 58 17 chr5 13189122 13189362 -186440788 + MER41B LTR ERV1 181 430 -205 374 250 25 55 chr5 13189921 13190069 -186440081 + MIR SINE MIR 93 233 -29 1226 219 239 11 chr5 13192166 13192521 -186437629 + L1MD2 LINE L1 5687 5960 -399 249 108 0 0 chr5 13192521 13192558 -186437592 + (CA)n Simple_repeat Simple_repeat 2 38 0 1226 219 239 11 chr5 13192558 13192737 -186437413 + L1MD2 LINE L1 5960 6343 -16 190 179 36 0 chr5 13192884 13192940 -186437210 + GA-rich Low_complexity Low_complexity 3 60 0 1744 183 121 7 chr5 13193879 13194310 -186435840 + MER31A LTR ERV1 1 480 -5 4447 208 47 21 chr5 13194409 13195346 -186434804 + MER45B DNA AcHobo 2 968 -613 2147 141 0 7 chr5 13195346 13195650 -186434500 - AluSx SINE Alu -10 302 1 4447 208 47 21 chr5 13195650 13195714 -186434436 + MER45B DNA AcHobo 968 1029 -11 2683 77 9 0 chr5 13195916 13196266 -186433884 - THE1A LTR MaLR -2 353 1 204 309 49 89 chr5 13196522 13196645 -186433505 + L2 LINE L2 3063 3180 -92 2168 123 3 0 chr5 13198040 13198340 -186431810 + AluSg SINE Alu 1 301 -9 698 283 86 47 chr5 13199416 13199950 -186430200 + MLT1H1 LTR MaLR 1 555 0 21 57 0 0 chr5 13200107 13200142 -186430008 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 13200191 13200212 -186429938 + AT_rich Low_complexity Low_complexity 1 21 0 2000 73 0 8 chr5 13201030 13201277 -186428873 + AluY SINE Alu 1 245 -66 2347 256 30 20 chr5 13201318 13201449 -186428701 + L1ME2 LINE L1 5381 5509 -655 2278 164 36 24 chr5 13201449 13201870 -186428280 - MSTB LTR MaLR 0 426 1 2347 256 30 20 chr5 13201870 13202316 -186427834 + L1ME2 LINE L1 5509 5970 -194 183 80 0 0 chr5 13202316 13202341 -186427809 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 2347 256 30 20 chr5 13202341 13202528 -186427622 + L1ME2 LINE L1 5970 6154 -10 2249 72 0 29 chr5 13203129 13203477 -186426673 - AluY SINE Alu 0 311 1 693 253 74 0 chr5 13203479 13203681 -186426469 - MER58A DNA MER1_type -6 218 2 350 304 67 47 chr5 13204212 13204465 -186425685 + L3 LINE CR1 1314 1571 -6 295 258 21 43 chr5 13206301 13206394 -186423756 - L2 LINE L2 0 3313 3223 875 153 0 7 chr5 13207572 13207709 -186422441 - FRAM SINE Alu -18 158 23 513 0 0 0 chr5 13207775 13207832 -186422318 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 216 158 0 0 chr5 13207832 13207870 -186422280 + (TA)n Simple_repeat Simple_repeat 1 38 0 754 164 0 22 chr5 13207870 13208004 -186422146 - FLAM_C SINE Alu -2 131 1 2030 107 0 71 chr5 13209401 13209727 -186420423 - AluSg SINE Alu -5 305 3 318 309 85 12 chr5 13210122 13210287 -186419863 - L1ME4a LINE L1 -22 6099 5923 257 64 46 64 chr5 13210844 13210953 -186419197 + (TTATA)n Simple_repeat Simple_repeat 5 111 0 24 32 0 0 chr5 13210968 13210999 -186419151 + AT_rich Low_complexity Low_complexity 1 31 0 1058 165 23 0 chr5 13213592 13213768 -186416382 - AluSg/x SINE Alu -4 306 127 9245 106 18 4 chr5 13214592 13216007 -186414143 + L1P LINE L1 2762 4195 -1951 344 171 26 26 chr5 13216127 13216203 -186413947 + L1MC1 LINE L1 6244 6319 -14 6373 134 16 36 chr5 13217518 13218749 -186411401 + L1P3 LINE L1 28 1123 -5023 336 24 0 0 chr5 13218857 13218898 -186411252 + (GA)n Simple_repeat Simple_repeat 2 42 0 396 191 67 0 chr5 13218906 13218995 -186411155 - L1M4 LINE L1 -1202 4944 4850 288 266 0 0 chr5 13219377 13219441 -186410709 + L2 LINE L2 3250 3313 0 180 383 32 0 chr5 13219989 13220083 -186410067 + MIR SINE MIR 76 172 -90 418 165 0 25 chr5 13220182 13220261 -186409889 - THE1B LTR MaLR 0 364 288 601 230 27 0 chr5 13220271 13220419 -186409731 - L1P3 LINE L1 -3529 2617 2466 1057 137 11 16 chr5 13220523 13220706 -186409444 - L1MC1 LINE L1 -83 6250 6069 435 193 18 97 chr5 13220753 13220800 -186409350 - L1MC1 LINE L1 -2171 5637 5588 243 79 0 0 chr5 13220800 13220838 -186409312 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 1706 119 4 8 chr5 13220838 13221075 -186409075 - AluSg SINE Alu -28 282 47 435 193 18 97 chr5 13221075 13221146 -186409004 - L1MC1 LINE L1 -2218 5590 5533 228 182 0 0 chr5 13221830 13221874 -186408276 + (TG)n Simple_repeat Simple_repeat 1 44 0 971 128 0 0 chr5 13221874 13222072 -186408078 - L1P3 LINE L1 -4677 1469 1272 1061 93 0 0 chr5 13222075 13222214 -186407936 + L1P3 LINE L1 946 1084 -5377 726 244 107 99 chr5 13223201 13223566 -186406584 + MER57B LTR ERV1 67 434 0 1875 140 35 77 chr5 13224438 13224867 -186405283 - L1 LINE L1 -1801 4345 3935 22 35 0 0 chr5 13225472 13225501 -186404649 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 13225906 13225934 -186404216 + AT_rich Low_complexity Low_complexity 1 28 0 1555 254 94 31 chr5 13226685 13227291 -186402859 + HsTC2a DNA Tc2 14 657 -87 240 191 36 12 chr5 13227331 13227415 -186402735 + CT-rich Low_complexity Low_complexity 3 88 0 408 160 80 0 chr5 13227883 13227958 -186402192 + L1PA16 LINE L1 6077 6157 -9 1396 188 89 0 chr5 13229161 13229465 -186400685 - MER2 DNA MER2_type -7 338 8 247 264 27 18 chr5 13229866 13229976 -186400174 - L1MEc LINE L1 -6250 146 36 813 175 8 0 chr5 13231385 13231510 -186398640 + MER1B DNA MER1_type 21 146 -151 376 20 78 0 chr5 13231510 13231561 -186398589 - MLT2A2 LTR ERVL 0 453 399 369 162 0 0 chr5 13231561 13231629 -186398521 + (CA)n Simple_repeat Simple_repeat 1 68 0 203 318 16 0 chr5 13231639 13231702 -186398448 + (CATA)n Simple_repeat Simple_repeat 4 67 0 234 245 0 43 chr5 13231702 13231796 -186398354 + L1MC4 LINE L1 6614 6703 -1339 246 208 0 0 chr5 13231799 13231852 -186398298 + (TA)n Simple_repeat Simple_repeat 1 53 0 2870 108 0 26 chr5 13231852 13232276 -186397874 - MLT2A2 LTR ERVL -40 413 1 722 196 76 71 chr5 13232283 13232467 -186397683 + MER1B DNA MER1_type 155 339 0 1881 135 35 0 chr5 13233887 13234169 -186395981 + AluSc SINE Alu 1 292 -17 337 281 158 14 chr5 13234814 13234953 -186395197 + MIR SINE MIR 35 193 -69 373 385 7 7 chr5 13235747 13235882 -186394268 + MER91A DNA MER1_type 15 149 -47 2964 172 72 27 chr5 13236364 13236578 -186393572 + L1MA9 LINE L1 5578 5781 -531 396 0 0 0 chr5 13236578 13236622 -186393528 + (CA)n Simple_repeat Simple_repeat 2 45 0 2964 172 72 27 chr5 13236622 13237046 -186393104 + L1MA9 LINE L1 5781 6245 -67 1989 171 119 10 chr5 13237242 13237628 -186392522 - MSTA LTR MaLR 0 428 1 8925 179 19 12 chr5 13237628 13239267 -186390883 - MSTA-int LTR MaLR 0 1651 1 2131 143 120 5 chr5 13239267 13239651 -186390499 - MSTA LTR MaLR 0 428 1 495 291 23 102 chr5 13239652 13239917 -186390233 + MIR SINE MIR 15 258 -4 2197 124 3 0 chr5 13240078 13240384 -186389766 + AluSg SINE Alu 1 307 -3 332 283 133 0 chr5 13240868 13240988 -186389162 - MIR SINE MIR -120 142 7 21 0 0 0 chr5 13241133 13241154 -186388996 + AT_rich Low_complexity Low_complexity 1 21 0 227 293 79 43 chr5 13241456 13241620 -186388530 - L2 LINE L2 -25 3288 3119 253 283 104 0 chr5 13243098 13243204 -186386946 + L1ME LINE L1 5550 5666 -455 476 315 38 46 chr5 13243256 13243494 -186386656 + MIR SINE MIR 17 252 -10 239 172 0 17 chr5 13243586 13243644 -186386506 + GA-rich Low_complexity Low_complexity 3 59 0 22 35 0 0 chr5 13243817 13243846 -186386304 + AT_rich Low_complexity Low_complexity 1 29 0 1649 183 0 20 chr5 13244428 13244723 -186385427 + AluJo SINE Alu 3 291 -21 2254 108 0 0 chr5 13245003 13245300 -186384850 - AluY SINE Alu -13 298 2 1268 242 84 49 chr5 13245671 13246054 -186384096 - MER97c DNA MER1_type? 0 1090 722 3357 30 0 2 chr5 13246054 13246456 -186383694 + L1PA4 LINE L1 5752 6152 -3 1268 242 84 49 chr5 13246456 13247016 -186383134 - MER97c DNA MER1_type? -368 722 40 862 306 92 34 chr5 13247066 13247534 -186382616 + L2 LINE L2 2815 3309 -4 257 167 0 61 chr5 13247795 13247861 -186382289 + LTR66 LTR ERVL 377 438 -172 225 250 31 0 chr5 13247861 13247925 -186382225 + L1MC4 LINE L1 6637 6702 -1340 417 228 0 35 chr5 13247927 13248072 -186382078 + (TATATG)n Simple_repeat Simple_repeat 3 142 0 227 288 0 12 chr5 13248082 13248162 -186381988 - L1MC4 LINE L1 -1347 6695 6617 225 234 0 0 chr5 13248339 13248403 -186381747 + (TA)n Simple_repeat Simple_repeat 2 65 0 242 310 11 0 chr5 13250119 13250206 -186379944 - MER103 DNA DNA -2 164 77 444 248 222 7 chr5 13250410 13250563 -186379587 - MER5A DNA MER1_type 0 189 4 925 215 9 36 chr5 13250573 13250796 -186379354 - MER20 DNA MER1_type 0 219 3 1797 153 0 4 chr5 13250972 13251246 -186378904 + AluSx SINE Alu 1 273 -39 248 288 27 14 chr5 13251946 13252019 -186378131 + MIR3 SINE MIR 106 179 -29 28 0 0 0 chr5 13252076 13252104 -186378046 + AT_rich Low_complexity Low_complexity 1 28 0 359 315 121 58 chr5 13254765 13255304 -186374846 + L2 LINE L2 1620 2192 -1122 1865 169 0 0 chr5 13256173 13256469 -186373681 - AluSg SINE Alu -14 296 1 265 240 39 10 chr5 13256509 13256613 -186373537 - L1M4 LINE L1 -3595 3362 3256 2404 242 40 49 chr5 13256615 13258540 -186371610 - L1M4 LINE L1 -4799 2160 151 225 309 0 0 chr5 13258750 13258844 -186371306 + L1M4 LINE L1 5004 5097 -1049 2216 92 0 7 chr5 13258999 13259281 -186370869 - AluSq SINE Alu -17 296 17 235 301 14 0 chr5 13259496 13259569 -186370581 + L1P3 LINE L1 5477 5550 -622 1057 164 6 0 chr5 13260133 13260304 -186369846 + FRAM SINE Alu 1 172 -4 243 0 0 0 chr5 13260680 13260707 -186369443 + (TTG)n Simple_repeat Simple_repeat 2 28 0 441 313 106 17 chr5 13260869 13261048 -186369102 - L3 LINE CR1 -12 1565 1371 224 329 26 0 chr5 13261265 13261341 -186368809 - L3 LINE CR1 -542 1035 958 452 341 5 28 chr5 13261396 13261661 -186368489 + MIR SINE MIR 2 262 0 275 269 183 32 chr5 13261690 13261876 -186368274 - L3 LINE CR1 -692 885 672 2265 128 75 9 chr5 13261880 13262333 -186367817 + MER1A DNA MER1_type 1 525 -4 312 326 16 16 chr5 13262761 13262890 -186367260 - L3 LINE CR1 -1123 454 326 986 170 72 26 chr5 13264003 13264061 -186366089 - L1P LINE L1 -3630 2516 2462 519 60 0 0 chr5 13264061 13264128 -186366022 + (TA)n Simple_repeat Simple_repeat 2 68 0 986 170 72 26 chr5 13264128 13264334 -186365816 - L1P LINE L1 -3684 2462 2240 1611 178 41 46 chr5 13264334 13264700 -186365450 - THE1B LTR MaLR 0 364 1 2457 217 16 9 chr5 13267220 13267769 -186362381 - MER74A LTR ERVL 0 558 6 21 36 0 0 chr5 13267841 13267869 -186362281 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 13268300 13268321 -186361829 + AT_rich Low_complexity Low_complexity 1 21 0 2127 130 0 0 chr5 13268498 13268798 -186361352 - AluSx SINE Alu -12 300 1 555 203 149 31 chr5 13269504 13269726 -186360424 + MER46C DNA MER2_type 86 333 -5 199 274 39 0 chr5 13270346 13270397 -186359753 + L2 LINE L2 3214 3266 -6 1920 147 10 0 chr5 13271017 13271309 -186358841 + AluSx SINE Alu 1 295 -17 505 110 20 20 chr5 13271314 13271414 -186358736 + (GGAA)n Simple_repeat Simple_repeat 1 100 0 350 289 60 27 chr5 13272226 13272375 -186357775 + MIR3 SINE MIR 20 173 -35 334 104 0 0 chr5 13272653 13272701 -186357449 - MADE1 DNA Mariner 0 80 33 492 266 149 0 chr5 13272975 13273163 -186356987 - MIR SINE MIR -43 219 4 532 279 127 23 chr5 13273215 13273532 -186356618 - L1ME3A LINE L1 -338 5832 5479 1741 192 3 3 chr5 13275002 13275310 -186354840 - AluJo SINE Alu -4 308 1 2011 127 0 20 chr5 13276373 13276673 -186353477 - AluSx SINE Alu -18 294 1 2752 83 5 5 chr5 13276825 13277199 -186352951 - THE1C LTR MaLR -1 374 1 211 233 19 0 chr5 13277682 13277747 -186352403 + MIR SINE MIR 95 146 -62 23 33 0 0 chr5 13278572 13278602 -186351548 + AT_rich Low_complexity Low_complexity 1 30 0 1291 282 39 78 chr5 13279125 13279938 -186350212 - L2 LINE L2 -315 2957 2186 22 0 0 0 chr5 13280715 13280737 -186349413 + AT_rich Low_complexity Low_complexity 1 22 0 2106 218 33 4 chr5 13280867 13281321 -186348829 - MLT1C LTR MaLR 0 467 1 591 325 23 52 chr5 13281435 13281740 -186348410 + L2 LINE L2 2190 2485 -829 1249 257 118 47 chr5 13281763 13282358 -186347792 - MLT1E2 LTR MaLR 0 626 1 302 238 95 48 chr5 13282586 13282691 -186347459 + L2 LINE L2 2693 2802 -512 242 213 33 90 chr5 13282714 13282836 -186347314 + L2 LINE L2 3095 3209 -104 256 280 190 10 chr5 13284316 13284416 -186345734 + L2 LINE L2 3149 3266 -6 346 105 64 23 chr5 13285348 13285519 -186344631 + (TA)n Simple_repeat Simple_repeat 2 179 0 32 43 0 0 chr5 13286000 13286046 -186344104 + AT_rich Low_complexity Low_complexity 1 46 0 24 77 0 0 chr5 13286597 13286649 -186343501 + AT_rich Low_complexity Low_complexity 1 52 0 2201 135 0 0 chr5 13287441 13287745 -186342405 - AluSx SINE Alu -8 304 1 1786 140 122 33 chr5 13288946 13289339 -186340811 + MSTA LTR MaLR 1 428 0 412 183 61 0 chr5 13290000 13290082 -186340068 + MIR SINE MIR 86 172 -90 1445 203 57 0 chr5 13290307 13290588 -186339562 + AluJb SINE Alu 1 297 -15 21 36 0 0 chr5 13292694 13292722 -186337428 + AT_rich Low_complexity Low_complexity 1 28 0 355 91 127 0 chr5 13293815 13293870 -186336280 - MADE1 DNA Mariner -18 62 1 852 281 69 46 chr5 13293890 13294353 -186335797 - L1ME3A LINE L1 -291 5879 5399 2534 114 6 0 chr5 13294353 13294714 -186335436 - THE1B LTR MaLR -1 363 1 852 281 69 46 chr5 13294714 13294816 -186335334 - L1ME3A LINE L1 -771 5399 5301 427 246 42 36 chr5 13294870 13295037 -186335113 - L1ME3A LINE L1 -914 5232 5065 574 282 55 0 chr5 13295155 13295410 -186334740 - L1ME3A LINE L1 -1240 4906 4638 183 42 0 0 chr5 13295836 13295860 -186334290 + (GGAA)n Simple_repeat Simple_repeat 4 27 0 779 147 6 0 chr5 13295860 13296037 -186334113 + GA-rich Low_complexity Low_complexity 1 178 0 275 365 7 0 chr5 13296776 13296921 -186333229 + HAL1b LINE L1 374 519 -829 608 265 100 28 chr5 13297207 13297456 -186332694 - LTR7 LTR ERV1 0 450 184 2280 88 7 0 chr5 13297805 13298101 -186332049 + AluY SINE Alu 1 298 -13 324 0 0 0 chr5 13298836 13298872 -186331278 + (TG)n Simple_repeat Simple_repeat 2 37 0 578 307 109 60 chr5 13302027 13302603 -186327547 + L2 LINE L2 2665 3276 -37 422 0 38 0 chr5 13302631 13302684 -186327466 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 21 0 0 0 chr5 13302704 13302725 -186327425 + AT_rich Low_complexity Low_complexity 1 21 0 212 319 0 0 chr5 13305891 13305960 -186324190 + MIR3 SINE MIR 99 167 -41 268 240 62 27 chr5 13306103 13306249 -186323901 - Charlie7 DNA MER1_type 0 2612 2462 770 328 153 33 chr5 13306684 13307587 -186322563 + L3 LINE CR1 560 1570 -7 216 294 153 0 chr5 13307856 13307941 -186322209 + MIR SINE MIR 56 153 -109 24 32 0 0 chr5 13308979 13309010 -186321140 + AT_rich Low_complexity Low_complexity 1 31 0 192 243 27 54 chr5 13309357 13309431 -186320719 + MIR SINE MIR 65 136 -126 351 44 0 0 chr5 13309452 13309497 -186320653 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 2159 101 0 0 chr5 13309499 13309777 -186320373 - AluSg SINE Alu -32 278 1 44 63 0 0 chr5 13311723 13311802 -186318348 + AT_rich Low_complexity Low_complexity 1 79 0 373 348 148 28 chr5 13311813 13312204 -186317946 - L2 LINE L2 -535 2779 2342 252 327 40 7 chr5 13312326 13312476 -186317674 - L2 LINE L2 -1211 2103 1949 270 386 18 6 chr5 13313397 13313560 -186316590 - L3 LINE CR1 -418 1159 995 383 267 144 28 chr5 13313750 13313930 -186316220 + MIR SINE MIR 49 249 -13 391 272 221 26 chr5 13314917 13315112 -186315038 - MIR SINE MIR 0 262 30 371 233 56 83 chr5 13316187 13316367 -186313783 - MER104 DNA Tc2 0 180 6 2084 266 148 50 chr5 13316367 13318119 -186312031 + HAL1 LINE L1 162 2086 -421 883 158 14 53 chr5 13318148 13318409 -186311741 - MLT1A1 LTR MaLR 0 365 3 1455 263 140 6 chr5 13319781 13320408 -186309742 + L1MEc LINE L1 220 930 -5466 756 253 56 48 chr5 13320421 13320923 -186309227 + L1MEc LINE L1 976 1481 -4915 516 93 0 23 chr5 13320925 13321011 -186309139 + Alu SINE Alu 226 309 -3 286 326 0 16 chr5 13321159 13321288 -186308862 + L1MEc LINE L1 1666 1792 -4604 348 324 87 27 chr5 13322771 13322956 -186307194 - MIR SINE MIR -16 246 51 248 203 102 52 chr5 13323957 13324110 -186306040 - MLT1J1 LTR MaLR -22 424 256 2076 124 0 23 chr5 13326099 13326398 -186303752 - AluSx SINE Alu -20 292 1 318 375 21 0 chr5 13327967 13328111 -186302039 - MIR SINE MIR -8 254 108 439 238 111 22 chr5 13329244 13329425 -186300725 - MIR SINE MIR -61 201 5 1686 165 4 14 chr5 13329492 13329771 -186300379 + AluJb SINE Alu 4 279 -33 387 0 0 0 chr5 13329775 13329818 -186300332 + (CA)n Simple_repeat Simple_repeat 1 43 0 294 353 39 13 chr5 13329839 13329992 -186300158 + L2 LINE L2 3116 3272 0 954 265 71 82 chr5 13330352 13330983 -186299167 + MLT1E3 LTR MaLR 1 624 0 23 0 0 0 chr5 13332010 13332033 -186298117 + AT_rich Low_complexity Low_complexity 1 23 0 203 161 0 0 chr5 13333036 13333067 -186297083 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 185 108 27 0 chr5 13333214 13333251 -186296899 + (TA)n Simple_repeat Simple_repeat 1 38 0 321 346 57 13 chr5 13333505 13333664 -186296486 - MIR SINE MIR 0 262 97 196 326 49 12 chr5 13335458 13335592 -186294558 + MIR SINE MIR 3 144 -68 1213 169 111 29 chr5 13336136 13336262 -186293888 + AluJb SINE Alu 1 115 -187 2237 121 0 6 chr5 13336262 13336576 -186293574 + AluSq SINE Alu 2 313 0 1213 169 111 29 chr5 13336576 13336728 -186293422 + AluJb SINE Alu 115 302 0 499 271 85 34 chr5 13337875 13338111 -186292039 + MIR SINE MIR 12 259 -3 465 304 96 29 chr5 13339982 13340629 -186289521 - L1ME3 LINE L1 -216 5946 5257 327 314 64 59 chr5 13340793 13340838 -186289312 - L1ME3 LINE L1 -1089 5057 5014 1950 129 18 0 chr5 13340838 13341175 -186288975 - AluSx SINE Alu 0 342 1 327 314 64 59 chr5 13341175 13341364 -186288786 - L1ME3 LINE L1 -1132 5014 4821 258 248 73 9 chr5 13341589 13341698 -186288452 - L1 LINE L1 -1807 4339 4224 911 200 109 115 chr5 13341881 13342451 -186287699 - L1MB5 LINE L1 -8 6166 5599 1933 136 36 7 chr5 13342474 13342776 -186287374 - AluSx SINE Alu -1 311 1 192 40 0 0 chr5 13342823 13342848 -186287302 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1808 112 7 86 chr5 13342848 13343015 -186287135 - AluSx SINE Alu -32 280 146 2281 96 3 16 chr5 13343015 13343329 -186286821 - AluSg SINE Alu 0 310 1 1808 112 7 86 chr5 13343329 13343465 -186286685 - AluSx SINE Alu -166 146 1 1048 218 87 3 chr5 13343534 13343832 -186286318 - L1ME1 LINE L1 -327 5839 5517 596 82 0 0 chr5 13343909 13343994 -186286156 + AluY SINE Alu 218 302 -9 477 307 47 25 chr5 13344077 13344354 -186285796 - L1MEd LINE L1 -5294 825 543 367 149 27 0 chr5 13344529 13344603 -186285547 - L1MB8 LINE L1 -6 6172 6097 566 209 41 102 chr5 13346109 13346353 -186283797 + MER106A DNA MER1_type 3 231 -5 513 279 18 18 chr5 13346875 13347040 -186283110 - MER5B DNA MER1_type 0 178 14 262 231 179 43 chr5 13347233 13347350 -186282800 - MIR SINE MIR 0 262 130 1713 136 27 0 chr5 13347394 13347652 -186282498 + AluSx SINE Alu 39 303 -9 2265 96 0 19 chr5 13348102 13348414 -186281736 - AluSx SINE Alu -6 306 1 514 250 31 66 chr5 13351035 13351231 -186278919 - MER5A DNA MER1_type 0 189 1 3857 86 0 0 chr5 13351282 13351792 -186278358 - L1PB1 LINE L1 -1 6150 5641 1766 181 3 10 chr5 13351802 13352116 -186278034 + AluJo SINE Alu 1 312 0 410 273 62 0 chr5 13352119 13352247 -186277903 - MIR SINE MIR -3 259 124 2111 108 14 3 chr5 13352961 13353258 -186276892 - AluSq SINE Alu -13 300 1 1881 137 43 10 chr5 13353533 13353832 -186276318 - AluSq SINE Alu -3 310 2 409 263 44 18 chr5 13354293 13354407 -186275743 + MER5A DNA MER1_type 8 124 -65 217 318 61 0 chr5 13355558 13355624 -186274526 + L2 LINE L2 3222 3291 -22 696 258 95 28 chr5 13355904 13356187 -186273963 - LTR16A LTR ERVL -93 357 56 2053 136 7 0 chr5 13356521 13356822 -186273328 - AluSx SINE Alu -9 303 1 181 266 137 73 chr5 13360312 13360436 -186269714 - L2 LINE L2 -3 3269 3138 330 272 22 66 chr5 13360778 13360914 -186269236 + MIR SINE MIR 1 130 -132 2306 170 85 4 chr5 13360917 13361459 -186268691 - L1MB4 LINE L1 0 6180 5595 388 260 20 10 chr5 13361459 13361559 -186268591 + MIR SINE MIR 115 215 -47 2339 160 82 29 chr5 13361715 13361963 -186268187 - MER6A DNA MER2_type -260 605 372 2006 151 10 0 chr5 13361963 13362262 -186267888 + AluSx SINE Alu 1 302 -10 2339 160 82 29 chr5 13362262 13362525 -186267625 - MER6A DNA MER2_type -493 372 67 218 287 293 7 chr5 13365746 13365896 -186264254 - MIR3 SINE MIR -6 202 10 195 314 0 0 chr5 13366484 13366535 -186263615 - L2 LINE L2 -7 3265 3215 417 249 16 124 chr5 13366639 13366832 -186263318 - MIR SINE MIR -1 261 90 2296 107 0 25 chr5 13367989 13368307 -186261843 - AluSq SINE Alu -3 310 1 204 67 0 0 chr5 13368388 13368418 -186261732 + (CCTA)n Simple_repeat Simple_repeat 2 31 0 559 344 166 11 chr5 13368576 13368931 -186261219 - L2 LINE L2 -1148 2166 1757 213 384 88 8 chr5 13368951 13369076 -186261074 + MIR SINE MIR 13 147 -115 189 0 0 0 chr5 13369134 13369155 -186260995 + (TG)n Simple_repeat Simple_repeat 2 22 0 3782 104 60 53 chr5 13369242 13369989 -186260161 - Tigger3(Golem) DNA MER2_type -1 3028 2277 625 176 0 0 chr5 13369978 13370080 -186260070 - Tigger3(Golem) DNA MER2_type -2919 110 9 * 709 176 7 0 chr5 13370091 13370233 -186259917 - L1MA9 LINE L1 -272 6040 5898 478 169 0 0 chr5 13370236 13370319 -186259831 + L1MA9 LINE L1 6057 6139 -173 32 0 0 0 chr5 13370329 13370361 -186259789 + AT_rich Low_complexity Low_complexity 1 32 0 1534 69 0 5 chr5 13370361 13370565 -186259585 - L1PA8 LINE L1 -3 6169 5967 788 149 65 0 chr5 13370565 13370714 -186259436 + L1MA9 LINE L1 6143 6306 -6 1898 237 60 21 chr5 13371233 13371797 -186258353 - L1M4 LINE L1 -1405 4741 4147 243 0 0 0 chr5 13371797 13371824 -186258326 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1898 237 60 21 chr5 13371824 13371910 -186258240 - L1M4 LINE L1 -1999 4147 4066 1374 176 8 31 chr5 13372046 13372307 -186257843 - AluJo SINE Alu -21 291 37 942 147 21 0 chr5 13373208 13373351 -186256799 + AluSg/x SINE Alu 145 290 -20 214 149 21 21 chr5 13373873 13373920 -186256230 + (TA)n Simple_repeat Simple_repeat 1 47 0 1223 171 4 34 chr5 13373949 13374183 -186255967 - AluJo SINE Alu -3 309 83 24 0 0 0 chr5 13374196 13374220 -186255930 + AT_rich Low_complexity Low_complexity 1 24 0 793 216 6 23 chr5 13375887 13376058 -186254092 - MER45A DNA AcHobo -2 176 9 26 0 0 0 chr5 13376525 13376551 -186253599 + AT_rich Low_complexity Low_complexity 1 26 0 252 229 85 102 chr5 13376641 13376759 -186253391 + MIR SINE MIR 22 137 -71 2132 116 3 3 chr5 13377217 13377509 -186252641 - AluSx SINE Alu -17 295 4 245 318 24 12 chr5 13377782 13377867 -186252283 - MER5A DNA MER1_type -92 97 12 1604 160 7 41 chr5 13377928 13378222 -186251928 + AluJo SINE Alu 10 293 -19 212 330 52 31 chr5 13378383 13378480 -186251670 + L3b LINE CR1 1481 1579 -4 2201 115 3 0 chr5 13379236 13379531 -186250619 - AluSx SINE Alu -16 296 1 222 318 82 0 chr5 13381043 13381128 -186249022 - L2 LINE L2 -679 2635 2544 633 272 56 12 chr5 13381480 13381730 -186248420 - L1MA9 LINE L1 -37 6275 6015 333 369 43 0 chr5 13381824 13381965 -186248185 - MIR SINE MIR -110 152 6 246 62 0 0 chr5 13383876 13383908 -186246242 + (CAG)n Simple_repeat Simple_repeat 1 32 0 605 276 74 10 chr5 13385380 13385583 -186244567 - L2 LINE L2 -3037 277 62 29 47 0 0 chr5 13385621 13385664 -186244486 + AT_rich Low_complexity Low_complexity 1 43 0 251 313 61 10 chr5 13385804 13385903 -186244247 + L2 LINE L2 3191 3294 -19 1203 192 43 34 chr5 13385906 13386102 -186244048 - MLT1A1 LTR MaLR -4 361 159 2269 88 3 61 chr5 13386102 13386431 -186243719 - AluY SINE Alu -1 310 1 1203 192 43 34 chr5 13386431 13386583 -186243567 - MLT1A1 LTR MaLR -206 159 10 239 235 59 0 chr5 13387850 13387901 -186242249 - L2 LINE L2 -9 3263 3210 417 284 58 8 chr5 13388186 13388429 -186241721 + L1MC5 LINE L1 7337 7591 -370 324 300 94 11 chr5 13388530 13388710 -186241440 + L1MC5 LINE L1 7703 7897 -64 291 259 140 28 chr5 13390605 13390748 -186239402 + L2 LINE L2 2924 3082 -231 23 33 0 0 chr5 13392748 13392778 -186237372 + AT_rich Low_complexity Low_complexity 1 30 0 24 53 0 0 chr5 13393641 13393679 -186236471 + AT_rich Low_complexity Low_complexity 1 38 0 21 71 0 0 chr5 13394180 13394222 -186235928 + AT_rich Low_complexity Low_complexity 1 42 0 474 136 0 0 chr5 13395039 13395105 -186235045 - Alu SINE Alu -26 284 219 1659 143 42 4 chr5 13395105 13395364 -186234786 - AluSx SINE Alu -43 269 1 236 284 0 16 chr5 13395399 13395526 -186234624 + (TA)n Simple_repeat Simple_repeat 2 126 0 330 26 0 0 chr5 13395606 13395645 -186234505 + (CA)n Simple_repeat Simple_repeat 2 40 0 208 318 0 16 chr5 13395645 13395771 -186234379 + (TA)n Simple_repeat Simple_repeat 1 124 0 736 241 25 63 chr5 13396578 13396815 -186233335 + MIR SINE MIR 14 241 -21 950 194 0 11 chr5 13397134 13397309 -186232841 - AluJb SINE Alu -3 309 137 195 167 0 0 chr5 13397495 13397537 -186232613 + (TG)n Simple_repeat Simple_repeat 2 43 0 22 56 0 0 chr5 13397778 13397814 -186232336 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5 13398348 13398384 -186231766 + AT_rich Low_complexity Low_complexity 1 36 0 2289 249 47 20 chr5 13398777 13399557 -186230593 + L1ME1 LINE L1 5316 6116 -50 1362 204 137 0 chr5 13400224 13400582 -186229568 + MER63B DNA MER1_type 1 407 -29 23 33 0 0 chr5 13401304 13401334 -186228816 + AT_rich Low_complexity Low_complexity 1 30 0 406 266 32 19 chr5 13401474 13401628 -186228522 + CT-rich Low_complexity Low_complexity 4 159 0 657 296 107 70 chr5 13401934 13402761 -186227389 - L1MC/D LINE L1 -766 5380 4583 297 75 0 0 chr5 13402761 13402801 -186227349 + (CA)n Simple_repeat Simple_repeat 1 40 0 657 296 107 70 chr5 13402801 13403220 -186226930 - L1MC/D LINE L1 -1563 4583 4181 824 303 101 51 chr5 13404658 13405727 -186224423 + L2 LINE L2 2197 3313 0 519 135 0 0 chr5 13406452 13406548 -186223602 + (TC)n Simple_repeat Simple_repeat 1 96 0 1130 163 49 0 chr5 13406548 13406732 -186223418 - AluJb SINE Alu -34 278 86 525 246 29 6 chr5 13406778 13406949 -186223201 + MER96B DNA MER1_type? 2 176 -241 369 0 0 0 chr5 13407471 13407512 -186222638 + (CA)n Simple_repeat Simple_repeat 2 42 0 5037 147 12 20 chr5 13407858 13409145 -186221005 + L1PA13 LINE L1 4864 6142 -21 1509 174 0 46 chr5 13410473 13410729 -186219421 + AluJo SINE Alu 32 288 -24 208 0 0 0 chr5 13410729 13410752 -186219398 + (CAAAA)n Simple_repeat Simple_repeat 3 155 0 1509 174 0 46 chr5 13410752 13410776 -186219374 + AluJo SINE Alu 288 312 0 423 301 29 0 chr5 13411693 13411829 -186218321 + MIR SINE MIR 97 236 -26 1873 149 3 37 chr5 13411987 13412308 -186217842 + AluJb SINE Alu 1 310 -2 1049 171 23 0 chr5 13415063 13415238 -186214912 - AluSg/x SINE Alu -5 305 127 2312 91 0 0 chr5 13416881 13417178 -186212972 + AluY SINE Alu 1 297 -14 351 0 0 0 chr5 13417178 13417217 -186212933 + (TA)n Simple_repeat Simple_repeat 1 39 0 2139 171 13 50 chr5 13417294 13417724 -186212426 + L1MC3 LINE L1 7310 7722 -63 2217 112 10 0 chr5 13417724 13418018 -186212132 - AluSp SINE Alu -16 297 1 2139 171 13 50 chr5 13418018 13418062 -186212088 + L1MC3 LINE L1 7722 7766 -19 637 294 134 43 chr5 13418974 13419526 -186210624 + L1MEd LINE L1 285 886 -5233 1556 159 35 0 chr5 13421906 13422138 -186208012 + AluJo SINE Alu 37 276 -36 649 325 146 2 chr5 13423346 13423804 -186206346 + L2 LINE L2 2454 2977 -337 567 211 139 36 chr5 13423876 13424070 -186206080 + L2 LINE L2 3099 3312 -1 31 0 0 0 chr5 13425402 13425433 -186204717 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr5 13425502 13425534 -186204616 + AT_rich Low_complexity Low_complexity 1 32 0 277 288 62 0 chr5 13426448 13426528 -186203622 + MIR3 SINE MIR 124 208 0 355 275 265 28 chr5 13426935 13427119 -186203031 - L2 LINE L2 -9 3304 3165 1973 127 35 0 chr5 13427119 13427402 -186202748 - AluSc SINE Alu -16 293 1 355 275 265 28 chr5 13427402 13427613 -186202537 - L2 LINE L2 -148 3165 2815 286 284 0 23 chr5 13428980 13429068 -186201082 - MIR SINE MIR 0 262 177 1555 174 9 62 chr5 13429102 13429423 -186200727 + AluJo SINE Alu 1 304 -8 338 263 291 28 chr5 13430050 13430229 -186199921 - MIR SINE MIR -13 249 24 261 283 135 10 chr5 13430595 13430691 -186199459 + MIR SINE MIR 16 122 -95 1196 131 44 48 chr5 13430841 13431047 -186199103 - AluJo SINE Alu -102 210 6 260 270 0 0 chr5 13431086 13431149 -186199001 + MIR SINE MIR 177 239 -23 180 0 0 0 chr5 13432203 13432223 -186197927 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2064 125 3 19 chr5 13433270 13433581 -186196569 + AluSx SINE Alu 1 306 -6 2229 113 0 0 chr5 13433723 13434025 -186196125 - AluSc SINE Alu 0 309 8 221 300 30 80 chr5 13435004 13435104 -186195046 + MIR SINE MIR 21 115 -147 1145 135 140 0 chr5 13436521 13436728 -186193422 - MER46A DNA MER2_type 0 236 1 42 0 0 0 chr5 13437066 13437108 -186193042 + AT_rich Low_complexity Low_complexity 1 42 0 2483 82 0 3 chr5 13437248 13437554 -186192596 - AluSg SINE Alu -5 305 1 450 312 37 21 chr5 13438298 13438487 -186191663 - L2 LINE L2 -16 3297 3106 1589 146 3 106 chr5 13439169 13439490 -186190660 + AluJb SINE Alu 1 288 -14 27 73 0 0 chr5 13439824 13439879 -186190271 + AT_rich Low_complexity Low_complexity 1 55 0 1624 157 8 4 chr5 13440802 13441069 -186189081 - AluSx SINE Alu -3 309 42 285 332 72 10 chr5 13441665 13441858 -186188292 - MLT1I LTR MaLR -200 209 5 2104 135 0 7 chr5 13441901 13442205 -186187945 + AluSx SINE Alu 3 304 -8 1352 238 75 23 chr5 13442732 13443169 -186186981 + MLT1C LTR MaLR 2 461 -6 1543 150 0 0 chr5 13443447 13443667 -186186483 - AluSg/x SINE Alu -7 305 86 246 339 51 17 chr5 13444304 13444422 -186185728 - MIR SINE MIR -90 172 51 318 82 71 0 chr5 13444700 13444785 -186185365 + (CA)n Simple_repeat Simple_repeat 1 91 0 859 58 53 12 chr5 13444831 13445002 -186185148 + (CA)n Simple_repeat Simple_repeat 1 178 0 210 129 81 0 chr5 13445184 13445246 -186184904 + (TA)n Simple_repeat Simple_repeat 1 67 0 242 92 58 42 chr5 13445274 13445394 -186184756 + (TATAA)n Simple_repeat Simple_repeat 5 126 0 334 307 92 6 chr5 13445950 13446113 -186184037 + L1ME4a LINE L1 5923 6099 -22 2076 109 0 70 chr5 13446472 13446803 -186183347 + AluSg SINE Alu 1 308 -2 760 164 0 22 chr5 13448198 13448332 -186181818 + FLAM_C SINE Alu 1 131 -2 216 158 0 0 chr5 13448332 13448370 -186181780 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 549 0 0 0 chr5 13448370 13448431 -186181719 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 903 146 0 7 chr5 13448497 13448634 -186181516 + FRAM SINE Alu 23 158 -18 294 258 21 43 chr5 13449813 13449906 -186180244 + L2 LINE L2 3223 3313 0 337 308 67 47 chr5 13451742 13451995 -186178155 - L3 LINE CR1 -6 1571 1314 668 257 74 0 chr5 13452526 13452728 -186177422 + MER58A DNA MER1_type 2 218 -6 2273 75 0 26 chr5 13452730 13453069 -186177081 + AluY SINE Alu 1 311 0 2038 110 132 6 chr5 13454202 13454565 -186175585 - MSTA LTR MaLR -19 409 1 1587 154 0 54 chr5 13454845 13455143 -186175007 - AluJo SINE Alu -30 282 1 618 175 28 34 chr5 13455339 13455516 -186174634 - MER53 DNA DNA 0 189 14 189 264 19 0 chr5 13456642 13456695 -186173455 - MIR SINE MIR -2 260 207 1186 137 0 0 chr5 13456695 13456870 -186173280 - AluSg/x SINE Alu -5 307 133 255 267 40 0 chr5 13456870 13456945 -186173205 - MIR SINE MIR -48 214 137 360 0 0 0 chr5 13456945 13456985 -186173165 + (TTA)n Simple_repeat Simple_repeat 3 42 0 3646 39 2 0 chr5 13456985 13457421 -186172729 - L1PA4 LINE L1 -18 6137 5701 1633 19 0 0 chr5 13457421 13457631 -186172519 + L1P2 LINE L1 5268 5477 -678 576 242 32 38 chr5 13457636 13457793 -186172357 - MIR SINE MIR -106 156 1 661 302 154 31 chr5 13458615 13459361 -186170789 + L2 LINE L2 925 1762 -1552 30 0 0 0 chr5 13459395 13459425 -186170725 + AT_rich Low_complexity Low_complexity 1 30 0 404 210 48 32 chr5 13459436 13459560 -186170590 - MIR SINE MIR -25 237 112 621 254 155 9 chr5 13459571 13459803 -186170347 + L2 LINE L2 3043 3308 -5 26 0 0 0 chr5 13459860 13459886 -186170264 + AT_rich Low_complexity Low_complexity 1 26 0 2076 127 0 0 chr5 13459976 13460297 -186169853 - AluSx SINE Alu 0 321 1 2061 120 48 31 chr5 13460954 13461312 -186168838 - THE1B LTR MaLR 0 364 1 248 109 0 22 chr5 13462195 13462241 -186167909 + (CA)n Simple_repeat Simple_repeat 1 45 0 195 42 0 0 chr5 13463510 13463534 -186166616 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1122 206 42 80 chr5 13463537 13463824 -186166326 - AluJo SINE Alu -34 278 3 288 245 162 91 chr5 13463991 13464155 -186165995 - L2 LINE L2 -835 2479 2287 448 152 13 0 chr5 13464155 13464234 -186165916 - MADE1 DNA Mariner 0 80 1 288 245 162 91 chr5 13464234 13464334 -186165816 - L2 LINE L2 -1027 2287 2196 685 175 56 94 chr5 13465755 13466075 -186164075 - Charlie2 DNA MER1_type -413 2449 2142 * 1998 227 93 25 chr5 13466074 13466718 -186163432 + MER72 LTR ERV1 10 697 -25 248 231 0 0 chr5 13466745 13466810 -186163340 - Charlie2 DNA MER1_type -711 2151 2087 204 132 85 151 chr5 13467316 13467422 -186162728 - MER5A DNA MER1_type -77 112 14 342 239 231 17 chr5 13468222 13468339 -186161811 - MER5A DNA MER1_type -2 187 46 1669 165 3 44 chr5 13468763 13469078 -186161072 - AluJb SINE Alu -6 306 5 1709 131 47 86 chr5 13469349 13469644 -186160506 - MLT1B LTR MaLR 0 390 114 2093 125 3 0 chr5 13469644 13469931 -186160219 - AluSx SINE Alu -24 288 1 1709 131 47 86 chr5 13469931 13470041 -186160109 - MLT1B LTR MaLR -276 114 1 2564 52 0 40 chr5 13470666 13470990 -186159160 + AluY SINE Alu 1 311 0 1209 141 187 38 chr5 13471015 13471277 -186158873 + AluSq SINE Alu 1 301 -2 194 286 79 0 chr5 13472083 13472146 -186158004 + L2 LINE L2 3246 3313 0 22 70 0 0 chr5 13472199 13472242 -186157908 + AT_rich Low_complexity Low_complexity 1 43 0 1199 137 43 0 chr5 13472249 13472460 -186157690 + L1MA6 LINE L1 5996 6215 -85 2465 63 3 0 chr5 13472470 13472769 -186157381 + AluSp SINE Alu 1 300 -13 2092 159 55 14 chr5 13472944 13473208 -186156942 - L1MB4 LINE L1 -3 6177 5886 1960 144 86 12 chr5 13473208 13473547 -186156603 + THE1B LTR MaLR 1 364 0 2092 159 55 14 chr5 13473547 13473721 -186156429 - L1MB4 LINE L1 -294 5886 5721 1477 164 0 4 chr5 13473728 13473960 -186156190 - AluJb SINE Alu 0 312 82 339 326 8 0 chr5 13474312 13474441 -186155709 - MLT1F LTR MaLR -393 149 20 695 155 28 14 chr5 13474673 13474815 -186155335 + L1MA6 LINE L1 6144 6287 -13 204 255 20 0 chr5 13475496 13475547 -186154603 + CT-rich Low_complexity Low_complexity 2 53 0 4039 102 18 55 chr5 13476102 13476760 -186153390 + MER51A LTR ERV1 1 634 0 408 262 18 24 chr5 13477121 13477285 -186152865 + (TA)n Simple_repeat Simple_repeat 1 163 0 183 42 0 0 chr5 13477321 13477345 -186152805 + (CA)n Simple_repeat Simple_repeat 1 24 0 2670 23 7 3 chr5 13479404 13479714 -186150436 - AluY SINE Alu 0 311 1 639 142 0 71 chr5 13479953 13480057 -186150093 + MLT1C LTR MaLR 350 445 -22 1542 167 106 6 chr5 13480057 13480387 -186149763 + MLT1A1 LTR MaLR 3 365 0 639 142 0 71 chr5 13480387 13480409 -186149741 + MLT1C LTR MaLR 445 467 0 308 274 149 56 chr5 13480894 13481215 -186148935 + L3 LINE CR1 587 937 -640 390 297 16 0 chr5 13481280 13481408 -186148742 + MIR SINE MIR 107 236 -26 469 346 34 14 chr5 13481666 13481874 -186148276 + L3 LINE CR1 1264 1475 -102 1671 170 10 17 chr5 13482203 13482497 -186147653 + AluJo SINE Alu 2 293 -19 2380 28 43 0 chr5 13484600 13484882 -186145268 + AluY SINE Alu 2 295 -16 186 43 0 0 chr5 13485031 13485054 -186145096 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 183 80 0 0 chr5 13486244 13486269 -186143881 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 237 65 0 0 chr5 13488914 13488945 -186141205 + (A)n Simple_repeat Simple_repeat 1 31 0 27 29 0 0 chr5 13489656 13489690 -186140460 + AT_rich Low_complexity Low_complexity 1 34 0 642 265 57 14 chr5 13489796 13490007 -186140143 - MIR SINE MIR -33 229 10 1985 111 0 4 chr5 13490366 13490628 -186139522 + AluSg SINE Alu 35 295 -15 36 23 0 0 chr5 13490831 13490874 -186139276 + AT_rich Low_complexity Low_complexity 1 43 0 922 132 7 0 chr5 13492902 13493046 -186137104 + L1PA10 LINE L1 6023 6167 -1 180 0 0 0 chr5 13493539 13493559 -186136591 + (T)n Simple_repeat Simple_repeat 1 20 0 344 285 158 23 chr5 13493613 13493834 -186136316 - MIR SINE MIR -11 251 1 2236 108 0 3 chr5 13493999 13494294 -186135856 + AluSg SINE Alu 1 294 -16 2447 203 38 9 chr5 13495082 13495717 -186134433 + L1MA6 LINE L1 2482 3134 -3012 7505 160 18 25 chr5 13495734 13498317 -186131833 + L1MA6 LINE L1 3730 6295 -5 25 0 0 0 chr5 13499071 13499096 -186131054 + AT_rich Low_complexity Low_complexity 1 25 0 195 42 0 0 chr5 13501492 13501516 -186128634 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2151 103 0 0 chr5 13501516 13501797 -186128353 - AluSq SINE Alu -32 281 1 818 194 0 0 chr5 13501798 13501932 -186128218 - AluJo SINE Alu -178 134 1 393 286 70 41 chr5 13501940 13502111 -186128039 + MIR SINE MIR 51 226 -36 1331 242 21 6 chr5 13503295 13503625 -186126525 - MER58B DNA MER1_type 0 341 7 23 33 0 0 chr5 13507139 13507169 -186122981 + AT_rich Low_complexity Low_complexity 1 30 0 360 322 61 22 chr5 13509201 13509381 -186120769 + MIR SINE MIR 25 211 -51 463 262 202 57 chr5 13510062 13510394 -186119756 - L2 LINE L2 -4 3309 2930 355 341 28 34 chr5 13510697 13510876 -186119274 - MER5A DNA MER1_type -3 186 9 544 206 0 9 chr5 13513215 13513322 -186116828 - MER5A DNA MER1_type -80 109 4 235 144 115 4 chr5 13513390 13513444 -186116706 - Alu SINE Alu -256 47 2 748 164 8 8 chr5 13513730 13513852 -186116298 - FLAM_A SINE Alu -10 123 2 261 279 81 68 chr5 13513986 13514147 -186116003 + MER5B DNA MER1_type 1 163 -15 261 0 0 0 chr5 13515252 13515281 -186114869 + (T)n Simple_repeat Simple_repeat 1 29 0 26 0 0 0 chr5 13515861 13515887 -186114263 + AT_rich Low_complexity Low_complexity 1 26 0 1715 163 82 18 chr5 13516368 13516711 -186113439 + MLT1A1 LTR MaLR 1 365 0 315 0 0 0 chr5 13516789 13516824 -186113326 + (TG)n Simple_repeat Simple_repeat 2 36 0 2245 107 0 19 chr5 13517521 13517831 -186112319 - AluSg SINE Alu -6 304 1 546 297 17 17 chr5 13519830 13520005 -186110145 + MIR SINE MIR 18 192 -70 21 71 0 0 chr5 13520008 13520050 -186110100 + AT_rich Low_complexity Low_complexity 1 42 0 1509 321 51 34 chr5 13521347 13522103 -186108047 + L2 LINE L2 2269 3036 -277 2281 84 0 0 chr5 13522162 13522489 -186107661 + AluY SINE Alu 1 327 0 821 120 0 0 chr5 13522489 13522614 -186107536 + L1PA16 LINE L1 6034 6158 -8 261 308 179 0 chr5 13522673 13522790 -186107360 + L2 LINE L2 3167 3304 -9 1829 129 4 14 chr5 13522793 13523072 -186107078 + AluSx SINE Alu 1 276 -36 459 0 0 0 chr5 13523072 13523123 -186107027 + (TG)n Simple_repeat Simple_repeat 2 52 0 484 290 116 99 chr5 13525101 13525639 -186104511 - L1M2 LINE L1 -5708 1141 585 216 0 0 0 chr5 13525639 13525663 -186104487 + (CGG)n Simple_repeat Simple_repeat 3 26 0 484 290 116 99 chr5 13525663 13525885 -186104265 - L1M2 LINE L1 -6264 585 368 203 204 0 23 chr5 13527084 13527128 -186103022 + (TATATG)n Simple_repeat Simple_repeat 4 46 0 417 206 186 0 chr5 13527191 13527288 -186102862 + L2 LINE L2 3192 3306 -7 621 262 12 23 chr5 13527491 13527663 -186102487 + MER5B DNA MER1_type 7 176 -2 393 253 74 79 chr5 13527675 13527865 -186102285 + MER5A DNA MER1_type 1 189 0 344 271 12 0 chr5 13527881 13527966 -186102184 - MER5A DNA MER1_type -87 102 17 593 219 84 11 chr5 13528786 13528964 -186101186 + MER3 DNA MER1_type 19 209 0 1468 156 58 56 chr5 13530204 13530564 -186099586 + MER46B DNA MER2_type 1 236 0 226 214 0 0 chr5 13532529 13532571 -186097579 + GA-rich Low_complexity Low_complexity 1 42 0 695 264 153 42 chr5 13534288 13534836 -186095314 + L2 LINE L2 2687 3312 -1 25 0 0 0 chr5 13537853 13537878 -186092272 + AT_rich Low_complexity Low_complexity 1 25 0 204 304 94 47 chr5 13541197 13541368 -186088782 - MIR SINE MIR -56 206 28 442 313 99 30 chr5 13542060 13542293 -186087857 - MIR SINE MIR 0 262 14 2762 70 3 8 chr5 13543510 13543879 -186086271 - L1PA8 LINE L1 -1 6171 5805 224 303 11 11 chr5 13544343 13544432 -186085718 + L2 LINE L2 2968 3056 -257 328 136 136 12 chr5 13544451 13544532 -186085618 - Charlie1 DNA MER1_type -1 2760 2670 621 275 38 0 chr5 13544557 13544768 -186085382 - Charlie1 DNA MER1_type -2536 225 7 217 296 70 26 chr5 13544790 13544905 -186085245 + L2 LINE L2 3106 3225 -88 2174 122 26 0 chr5 13545082 13545386 -186084764 - AluSx SINE Alu 0 312 1 989 193 17 0 chr5 13545895 13546076 -186084074 + AluSc SINE Alu 117 300 -9 1976 116 7 0 chr5 13546371 13546646 -186083504 + AluSq SINE Alu 29 305 -8 417 173 27 55 chr5 13548437 13548547 -186081603 + LTR33 LTR ERVL 114 220 -301 421 296 40 11 chr5 13548563 13548739 -186081411 + LTR33 LTR ERVL 341 521 0 403 343 85 45 chr5 13549618 13550256 -186079894 - L1M4 LINE L1 -3216 2930 2268 24 0 0 0 chr5 13550477 13550501 -186079649 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 13550931 13550952 -186079198 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr5 13551032 13551076 -186079074 + AT_rich Low_complexity Low_complexity 1 44 0 2234 114 0 7 chr5 13551351 13551648 -186078502 - AluSg SINE Alu -15 295 1 24 67 0 0 chr5 13553762 13553807 -186076343 + AT_rich Low_complexity Low_complexity 1 45 0 289 310 44 44 chr5 13554033 13554191 -186075959 - MER5A DNA MER1_type -1 188 31 * 358 314 26 39 chr5 13554054 13554210 -186075940 + MER5A DNA MER1_type 35 188 -1 1241 239 136 21 chr5 13554393 13554828 -186075322 + MLT1D LTR MaLR 21 505 0 198 288 201 29 chr5 13554910 13555049 -186075101 - MIR SINE MIR -48 214 52 4698 100 29 0 chr5 13555077 13555758 -186074392 - L1PA14 LINE L1 0 6161 5461 1334 212 0 47 chr5 13555810 13556107 -186074043 + AluJo SINE Alu 13 295 -17 28 0 0 0 chr5 13556769 13556797 -186073353 + AT_rich Low_complexity Low_complexity 1 28 0 559 309 78 9 chr5 13557534 13557751 -186072399 - MIR SINE MIR -2 260 29 383 240 12 29 chr5 13557781 13557952 -186072198 + L1ME LINE L1 5135 5302 -844 572 291 97 15 chr5 13558010 13558402 -186071748 + L1ME LINE L1 5350 5773 -397 2319 123 5 46 chr5 13558428 13558601 -186071549 + HSMAR2 DNA Mariner 2 181 -1121 2213 95 3 0 chr5 13558601 13558920 -186071230 + AluSp SINE Alu 1 320 0 2319 123 5 46 chr5 13558920 13559161 -186070989 + HSMAR2 DNA Mariner 181 400 -902 402 100 29 0 chr5 13559195 13559265 -186070885 + HSMAR2 DNA Mariner 1230 1301 -1 345 205 0 0 chr5 13559435 13559547 -186070603 + (TA)n Simple_repeat Simple_repeat 1 112 0 2073 128 3 3 chr5 13560519 13560824 -186069326 + AluSg SINE Alu 1 305 -5 472 288 58 17 chr5 13561529 13561769 -186068381 + MER41B LTR ERV1 181 430 -205 365 258 25 55 chr5 13562328 13562476 -186067674 + MIR SINE MIR 93 233 -29 1483 213 241 13 chr5 13564574 13564929 -186065221 + L1MD2 LINE L1 5687 5960 -399 231 114 0 0 chr5 13564929 13564964 -186065186 + (CA)n Simple_repeat Simple_repeat 2 36 0 1483 213 241 13 chr5 13564964 13565143 -186065007 + L1MD2 LINE L1 5960 6343 -16 190 179 36 0 chr5 13565290 13565346 -186064804 + GA-rich Low_complexity Low_complexity 3 60 0 1931 183 121 7 chr5 13566285 13566716 -186063434 + MER31A LTR ERV1 1 480 -5 4894 204 47 21 chr5 13566815 13567752 -186062398 + MER45B DNA AcHobo 2 968 -613 2127 141 0 7 chr5 13567752 13568056 -186062094 - AluSx SINE Alu -10 302 1 4894 204 47 21 chr5 13568056 13568120 -186062030 + MER45B DNA AcHobo 968 1029 -11 2863 77 9 0 chr5 13568322 13568672 -186061478 - THE1A LTR MaLR -2 353 1 199 309 49 89 chr5 13568928 13569051 -186061099 + L2 LINE L2 3063 3180 -92 2167 123 3 0 chr5 13570446 13570747 -186059403 + AluSg SINE Alu 1 302 -8 931 275 90 51 chr5 13571823 13572357 -186057793 + MLT1H1 LTR MaLR 1 555 0 21 57 0 0 chr5 13572514 13572549 -186057601 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr5 13572598 13572618 -186057532 + (T)n Simple_repeat Simple_repeat 1 20 0 2358 83 0 7 chr5 13573439 13573739 -186056411 + AluY SINE Alu 1 298 -13 2629 249 30 31 chr5 13573759 13573899 -186056251 + L1ME2 LINE L1 5381 5520 -644 2448 166 36 24 chr5 13573899 13574320 -186055830 - MSTB LTR MaLR 0 426 1 2629 249 30 31 chr5 13574320 13574766 -186055384 + L1ME2 LINE L1 5520 5968 -196 183 80 0 0 chr5 13574766 13574791 -186055359 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 2629 249 30 31 chr5 13574791 13574978 -186055172 + L1ME2 LINE L1 5968 6154 -10 3081 48 11 0 chr5 13575524 13575875 -186054275 + THE1A LTR MaLR 1 355 0 302 225 50 6 chr5 13575920 13576080 -186054070 + (TG)n Simple_repeat Simple_repeat 1 167 0 234 174 33 16 chr5 13576120 13576241 -186053909 + (TG)n Simple_repeat Simple_repeat 1 123 0 236 211 24 10 chr5 13576252 13576437 -186053713 + (TG)n Simple_repeat Simple_repeat 1 212 0 305 273 35 6 chr5 13576480 13576652 -186053498 + (TG)n Simple_repeat Simple_repeat 1 177 0 258 279 35 6 chr5 13576832 13577004 -186053146 + (TG)n Simple_repeat Simple_repeat 1 177 0 366 233 47 6 chr5 13577111 13577283 -186052867 + (TG)n Simple_repeat Simple_repeat 1 179 0 246 290 35 0 chr5 13577302 13577447 -186052703 + (TG)n Simple_repeat Simple_repeat 2 151 0 215 244 116 58 chr5 13577639 13577811 -186052339 - L2 LINE L2 -783 2531 2350 332 241 46 19 chr5 13577836 13577944 -186052206 - L2 LINE L2 -1 3312 3202 287 195 78 109 chr5 13577917 13578045 -186052105 + L2 LINE L2 3189 3312 -1 * 1742 151 177 45 chr5 13578060 13578438 -186051712 - MSTA LTR MaLR 0 428 1 3822 135 8 12 chr5 13578438 13579032 -186051118 - MSTA-int LTR MaLR 0 1580 989 1975 156 178 6 chr5 13579034 13579399 -186050751 + MSTA LTR MaLR 1 428 0 821 156 106 110 chr5 13579649 13579867 -186050283 + MER58A DNA MER1_type 4 220 -4 21 36 0 0 chr5 13579929 13579957 -186050193 + AT_rich Low_complexity Low_complexity 1 28 0 1825 202 14 16 chr5 13580000 13580366 -186049784 - MLT1A1 LTR MaLR 0 365 1 360 0 0 0 chr5 13580826 13580866 -186049284 + (CA)n Simple_repeat Simple_repeat 2 41 0 284 289 40 59 chr5 13580993 13581145 -186049005 - MARNA DNA Mariner -352 234 86 707 344 74 40 chr5 13581882 13582575 -186047575 + L2 LINE L2 2525 3248 -24 671 301 31 9 chr5 13582823 13583052 -186047098 + MIR SINE MIR 8 241 -21 219 36 0 0 chr5 13583196 13583224 -186046926 + (CAAG)n Simple_repeat Simple_repeat 3 30 0 318 169 96 36 chr5 13583601 13583684 -186046466 + MER69 DNA AcHobo 2430 2517 -9 194 105 26 0 chr5 13583758 13583796 -186046354 + (TG)n Simple_repeat Simple_repeat 2 40 0 221 57 29 0 chr5 13583831 13583866 -186046284 + (TG)n Simple_repeat Simple_repeat 2 37 0 344 50 0 0 chr5 13583982 13584022 -186046128 - THE1B LTR MaLR 0 355 316 2356 100 31 31 chr5 13584023 13584372 -186045778 - THE1B LTR MaLR -15 349 1 520 337 36 8 chr5 13584588 13584840 -186045310 - MIR SINE MIR -2 260 2 1929 113 28 7 chr5 13586854 13587104 -186043046 + AluSg SINE Alu 1 259 -51 207 0 0 0 chr5 13587104 13587127 -186043023 + (CAGCC)n Simple_repeat Simple_repeat 5 27 0 1929 113 28 7 chr5 13587127 13587160 -186042990 + AluSg SINE Alu 259 290 -20 913 142 32 53 chr5 13587417 13587607 -186042543 - MER53 DNA DNA -1 188 3 198 268 119 3 chr5 13588712 13588816 -186041334 + MIR SINE MIR 32 147 -101 21 0 0 0 chr5 13589209 13589230 -186040920 + AT_rich Low_complexity Low_complexity 1 21 0 542 259 114 15 chr5 13589246 13589447 -186040703 - MIR SINE MIR -40 222 2 1906 158 23 0 chr5 13589700 13590003 -186040147 + AluJo SINE Alu 1 310 -2 4791 204 102 36 chr5 13590434 13591175 -186038975 - Charlie1a DNA MER1_type -1307 1454 764 14499 36 1 0 chr5 13591175 13593591 -186036559 - L1PA4 LINE L1 -1 6154 3737 4791 204 102 36 chr5 13593591 13594206 -186035944 - Charlie1a DNA MER1_type -1997 764 8 291 270 6 103 chr5 13595014 13595188 -186034962 + MIR SINE MIR 78 234 -28 1804 176 91 38 chr5 13595214 13595405 -186034745 - MLT1C LTR MaLR -47 420 241 2382 131 27 21 chr5 13595405 13595778 -186034372 - THE1C LTR MaLR 0 375 1 1804 176 91 38 chr5 13595778 13595983 -186034167 - MLT1C LTR MaLR -226 241 3 180 282 30 92 chr5 13596083 13596214 -186033936 - L2 LINE L2 -843 2471 2349 213 217 0 0 chr5 13596353 13596399 -186033751 - L2 LINE L2 -1 3312 3267 22 35 0 0 chr5 13596886 13596915 -186033235 + AT_rich Low_complexity Low_complexity 1 29 0 237 281 99 53 chr5 13598207 13598378 -186031772 + MLT1K LTR MaLR 169 347 -241 210 306 16 0 chr5 13598920 13598982 -186031168 - L2 LINE L2 -29 3243 3181 291 164 0 0 chr5 13599305 13599366 -186030784 + T-rich Low_complexity Low_complexity 1 61 0 2113 141 74 52 chr5 13600659 13601064 -186029086 - MLT2D LTR ERVL 0 414 1 695 298 91 32 chr5 13601107 13601571 -186028579 - L1ME2 LINE L1 -278 5886 5384 313 331 111 12 chr5 13601645 13601817 -186028333 + MIR SINE MIR 33 221 -41 241 244 79 8 chr5 13602010 13602137 -186028013 - L1ME2 LINE L1 -1090 5056 4921 1694 175 79 70 chr5 13602781 13603222 -186026928 - MER31B LTR ERV1 -21 445 1 4062 88 30 2 chr5 13603368 13603905 -186026245 + L1PA10 LINE L1 5616 6167 -1 2430 100 0 0 chr5 13604467 13604777 -186025373 - AluSg SINE Alu 0 310 1 202 265 0 0 chr5 13605855 13605904 -186024246 - L2 LINE L2 -18 3295 3247 744 173 95 31 chr5 13606015 13606235 -186023915 + MLT1G1 LTR MaLR 270 487 -18 2039 175 25 48 chr5 13606235 13606634 -186023516 + MLT1B LTR MaLR 1 390 0 744 173 95 31 chr5 13606634 13606646 -186023504 + MLT1G1 LTR MaLR 487 497 -8 1412 213 37 48 chr5 13607482 13607858 -186022292 + MLT1A2 LTR MaLR 3 374 0 926 283 172 40 chr5 13608088 13608129 -186022021 - L2 LINE L2 -526 2788 2754 2829 119 21 26 chr5 13608129 13608556 -186021594 + MSTA LTR MaLR 1 425 -3 926 283 172 40 chr5 13608556 13609020 -186021130 - L2 LINE L2 -560 2754 2216 350 285 39 23 chr5 13609023 13609153 -186020997 - MER94 DNA DNA -2 132 1 608 220 93 9 chr5 13609168 13609382 -186020768 - L2 LINE L2 -1102 2212 1981 288 269 52 30 chr5 13609382 13609516 -186020634 + L2 LINE L2 2119 2255 -1059 368 266 221 16 chr5 13609590 13609834 -186020316 + L2 LINE L2 3020 3313 0 1871 146 11 0 chr5 13610340 13610670 -186019480 + AluSx SINE Alu 1 333 0 21 0 0 0 chr5 13610772 13610793 -186019357 + AT_rich Low_complexity Low_complexity 1 21 0 1457 235 43 56 chr5 13611114 13611582 -186018568 - MLT1C LTR MaLR 0 467 6 678 225 89 0 chr5 13611602 13611815 -186018335 - L2 LINE L2 -1102 2212 1981 304 261 52 30 chr5 13611815 13611949 -186018201 + L2 LINE L2 2119 2255 -1059 861 231 18 27 chr5 13612835 13613060 -186017090 + MIR SINE MIR 15 237 -25 22 35 0 0 chr5 13614900 13614929 -186015221 + AT_rich Low_complexity Low_complexity 1 29 0 1735 175 68 22 chr5 13614947 13615312 -186014838 - MER58D DNA MER1_type -3 383 2 32 57 0 0 chr5 13616122 13616175 -186013975 + AT_rich Low_complexity Low_complexity 1 53 0 403 229 18 9 chr5 13616892 13617001 -186013149 - MER112 DNA MER1_type -12 248 139 647 311 18 5 chr5 13618924 13619143 -186011007 - MIR SINE MIR -38 224 3 1768 150 0 64 chr5 13619541 13619868 -186010282 - AluSx SINE Alu -4 308 3 2338 86 0 0 chr5 13620992 13621284 -186008866 + AluSx SINE Alu 1 292 -20 2279 100 0 19 chr5 13622161 13622472 -186007678 + AluSg SINE Alu 1 305 -5 1873 158 0 10 chr5 13623219 13623523 -186006627 - AluSx SINE Alu -11 301 1 249 365 48 12 chr5 13623570 13623737 -186006413 + MIR SINE MIR 1 173 -89 524 212 0 0 chr5 13623747 13623832 -186006318 + MER58A DNA MER1_type 7 91 -16 630 162 52 15 chr5 13623838 13623974 -186006176 - MLT1C LTR MaLR -326 141 1 453 306 115 25 chr5 13624117 13624395 -186005755 + L3 LINE CR1 882 1184 -393 282 95 0 0 chr5 13624637 13624679 -186005471 + (CA)n Simple_repeat Simple_repeat 1 42 0 341 284 58 0 chr5 13624680 13624835 -186005315 - L1ME4a LINE L1 -201 5920 5757 2654 61 0 0 chr5 13625379 13625690 -186004460 - AluY SINE Alu 0 311 1 1186 190 125 31 chr5 13625690 13626093 -186004057 - LTR54B LTR ERV1 -19 491 81 664 181 110 1 chr5 13627395 13627619 -186002531 + MSTD LTR MaLR 1 277 -119 437 258 131 28 chr5 13628544 13628865 -186001285 - MLT1F LTR MaLR -15 527 231 775 172 0 0 chr5 13628909 13629031 -186001119 - MLT2C2 LTR ERVL -48 416 295 860 187 7 0 chr5 13629037 13629192 -186000958 - MLT2C1 LTR ERVL -215 182 27 2040 124 66 30 chr5 13630445 13630807 -185999343 + THE1C LTR MaLR 1 375 0 1223 190 14 23 chr5 13631140 13631361 -185998789 + MER20 DNA MER1_type 1 219 0 357 298 48 42 chr5 13631624 13631792 -185998358 - L2 LINE L2 -18 3295 3127 208 373 78 25 chr5 13632183 13632387 -185997763 - L2 LINE L2 -549 2765 2551 435 138 25 38 chr5 13633318 13633398 -185996752 - MER20 DNA MER1_type 0 219 141 2319 117 47 36 chr5 13634499 13634859 -185995291 - THE1B LTR MaLR 0 364 1 475 306 40 69 chr5 13635401 13635651 -185994499 + MIR SINE MIR 6 251 -11 27 29 0 0 chr5 13636203 13636237 -185993913 + AT_rich Low_complexity Low_complexity 1 34 0 1091 261 78 7 chr5 13636540 13636987 -185993163 + MER119 DNA MER1_type 6 581 -2 26 30 0 0 chr5 13637050 13637083 -185993067 + AT_rich Low_complexity Low_complexity 1 33 0 1981 155 3 0 chr5 13637354 13637650 -185992500 + AluJo SINE Alu 1 297 -15 240 35 0 0 chr5 13637650 13637679 -185992471 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 324 0 0 0 chr5 13637678 13637714 -185992436 + (GA)n Simple_repeat Simple_repeat 2 37 0 1534 221 42 16 chr5 13638544 13638924 -185991226 + MER90 LTR ERV1 225 614 0 254 256 29 12 chr5 13639667 13639839 -185990311 + (TA)n Simple_repeat Simple_repeat 2 176 0 313 260 175 15 chr5 13640823 13641023 -185989127 + L2 LINE L2 2470 2701 -613 243 298 35 0 chr5 13641031 13641130 -185989020 - L1ME2 LINE L1 -10 6324 6065 382 268 159 78 chr5 13641131 13641512 -185988638 + L2 LINE L2 2690 3140 -173 1515 188 124 28 chr5 13641512 13641938 -185988212 - MLT1C LTR MaLR 0 467 1 382 268 159 78 chr5 13641938 13642058 -185988092 + L2 LINE L2 3140 3249 -64 1724 201 64 31 chr5 13642421 13642904 -185987246 - MLT1D LTR MaLR 0 505 7 2370 99 7 0 chr5 13643586 13643890 -185986260 + AluSx SINE Alu 1 306 -6 382 267 43 105 chr5 13644682 13644959 -185985191 - MIR SINE MIR -1 261 2 222 316 24 97 chr5 13645211 13645417 -185984733 - MIR SINE MIR -50 212 22 787 211 43 0 chr5 13645499 13645684 -185984466 - MER20 DNA MER1_type 0 219 27 224 204 0 56 chr5 13646882 13646936 -185983214 - L2 LINE L2 -546 2768 2718 465 143 41 21 chr5 13646990 13647469 -185982681 + (TG)n Simple_repeat Simple_repeat 1 488 0 750 108 43 14 chr5 13647492 13648063 -185982087 + (TG)n Simple_repeat Simple_repeat 1 587 0 203 190 0 35 chr5 13648421 13648479 -185981671 + (CAGGG)n Simple_repeat Simple_repeat 3 58 0 283 188 0 25 chr5 13649408 13649488 -185980662 + (TATATG)n Simple_repeat Simple_repeat 3 80 0 1128 143 0 30 chr5 13650508 13650676 -185979474 + FRAM SINE Alu 3 165 -1 2538 74 0 0 chr5 13650852 13651162 -185978988 + AluY SINE Alu 1 310 -1 916 204 82 0 chr5 13652465 13652661 -185977489 + MER20 DNA MER1_type 1 212 -7 1745 167 89 30 chr5 13653017 13653412 -185976738 - LTR52 LTR ERVL -3 418 1 428 308 62 7 chr5 13653675 13653821 -185976329 + MIR SINE MIR 61 214 -48 333 229 0 0 chr5 13653914 13654019 -185976131 + (TG)n Simple_repeat Simple_repeat 1 105 0 327 85 0 0 chr5 13654412 13654459 -185975691 + (CA)n Simple_repeat Simple_repeat 1 47 0 2189 99 50 0 chr5 13655389 13655672 -185974478 - AluSc SINE Alu -12 297 1 1065 252 71 27 chr5 13656652 13657069 -185973081 - L1MEc LINE L1 -4904 1492 1095 185 0 40 0 chr5 13657069 13657094 -185973056 + (TTATA)n Simple_repeat Simple_repeat 1 26 0 2955 57 6 0 chr5 13657094 13657444 -185972706 - L1PA7 LINE L1 -19 6135 5784 1065 252 71 27 chr5 13657444 13657505 -185972645 - L1MEc LINE L1 -5300 1096 992 419 100 14 0 chr5 13657663 13657733 -185972417 + (GA)n Simple_repeat Simple_repeat 2 72 0 222 288 4 44 chr5 13657990 13658089 -185972061 - MIR SINE MIR -61 147 52 243 0 0 0 chr5 13659037 13659064 -185971086 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 327 285 23 15 chr5 13660339 13660469 -185969681 + L1ME4a LINE L1 5773 5903 -218 223 292 14 0 chr5 13660851 13660923 -185969227 + (TA)n Simple_repeat Simple_repeat 2 74 0 333 0 0 0 chr5 13662796 13662833 -185967317 + (TG)n Simple_repeat Simple_repeat 2 38 0 2501 90 0 0 chr5 13663879 13664190 -185965960 - AluSx SINE Alu -1 311 1 2106 132 10 0 chr5 13664297 13664601 -185965549 + AluSx SINE Alu 1 307 -5 935 217 14 5 chr5 13666229 13666446 -185963704 + MER20 DNA MER1_type 1 219 0 557 322 55 0 chr5 13667065 13667267 -185962883 + L1ME LINE L1 5588 5800 -321 473 267 60 0 chr5 13667425 13667575 -185962575 + MER97c DNA MER1_type? 20 178 -912 763 261 101 13 chr5 13667626 13667932 -185962218 + MLT1J LTR MaLR 40 372 -139 522 272 60 30 chr5 13672537 13672718 -185957432 + MIR SINE MIR 11 202 -60 1799 197 43 47 chr5 13672718 13672757 -185957393 + MLT1D LTR MaLR 1 39 -466 2484 67 0 10 chr5 13672757 13673056 -185957094 - AluY SINE Alu -14 297 2 1799 197 43 47 chr5 13673056 13673523 -185956627 + MLT1D LTR MaLR 39 505 0 522 272 60 30 chr5 13673523 13673576 -185956574 + MIR SINE MIR 202 252 -10 589 249 14 84 chr5 13673600 13673769 -185956381 + MIR SINE MIR 2 151 -111 2436 87 3 6 chr5 13673769 13674081 -185956069 + AluY SINE Alu 1 311 0 589 249 14 84 chr5 13674081 13674152 -185955998 + MIR SINE MIR 151 225 -37 877 264 5 5 chr5 13674205 13674421 -185955729 + MER58A DNA MER1_type 2 217 -7 346 207 37 24 chr5 13676720 13676802 -185953348 + MER5B DNA MER1_type 90 172 -6 209 367 24 12 chr5 13676948 13677117 -185953033 - MER5B DNA MER1_type -4 174 4 998 200 19 23 chr5 13677132 13677347 -185952803 + MER20 DNA MER1_type 5 218 -1 2131 113 0 36 chr5 13677686 13677995 -185952155 + AluSx SINE Alu 3 300 -12 438 225 116 7 chr5 13679368 13679506 -185950644 - MER5A DNA MER1_type -4 185 33 239 220 250 30 chr5 13679676 13679776 -185950374 - MIR SINE MIR -70 192 71 21 36 0 0 chr5 13680102 13680130 -185950020 + AT_rich Low_complexity Low_complexity 1 28 0 187 323 86 21 chr5 13682873 13682966 -185947184 + L2 LINE L2 3149 3247 -25 227 140 0 60 chr5 13683576 13683626 -185946524 - L1M3e LINE L1 -5955 1075 1029 557 163 8 57 chr5 13684289 13684412 -185945738 + MER20 DNA MER1_type 56 172 -47 203 186 12 116 chr5 13684517 13684603 -185945547 - MER5A DNA MER1_type -2 187 111 716 253 29 6 chr5 13685429 13685603 -185944547 - MER58C DNA MER1_type 0 215 38 2491 71 3 0 chr5 13686928 13687224 -185942926 + AluSp SINE Alu 1 297 -16 247 336 57 8 chr5 13687399 13687521 -185942629 - L2 LINE L2 -11 3261 3134 989 234 42 73 chr5 13688468 13688852 -185941298 + MLT1E2-int LTR MaLR 1000 1371 0 1503 241 109 66 chr5 13688852 13689446 -185940704 + MLT1E2 LTR MaLR 1 620 -6 720 65 75 0 chr5 13689630 13690243 -185939907 + (TA)n Simple_repeat Simple_repeat 1 658 0 2474 63 0 7 chr5 13692414 13692715 -185937435 + AluY SINE Alu 1 299 -12 1455 211 39 14 chr5 13693229 13693585 -185936565 + MLT1A1 LTR MaLR 1 365 0 2256 124 3 0 chr5 13694253 13694560 -185935590 - AluSp SINE Alu -5 308 1 1463 248 86 79 chr5 13694809 13695429 -185934721 + MLT1E2 LTR MaLR 1 626 0 1189 198 27 7 chr5 13696845 13697163 -185932987 + MLT1A1 LTR MaLR 1 357 -8 326 264 87 28 chr5 13697486 13697740 -185932410 + L2 LINE L2 2458 2781 -533 488 237 53 0 chr5 13697891 13698022 -185932128 + L2 LINE L2 3168 3305 -8 1290 229 97 26 chr5 13698758 13699327 -185930823 - MLT1E2 LTR MaLR 0 626 1 1809 144 0 0 chr5 13699912 13700169 -185929981 - AluSx SINE Alu -55 257 1 1614 189 114 43 chr5 13700625 13701091 -185929059 - MLT1D LTR MaLR -5 500 2 27 29 0 0 chr5 13701723 13701757 -185928393 + AT_rich Low_complexity Low_complexity 1 34 0 1913 180 3 0 chr5 13701856 13702162 -185927988 - AluJb SINE Alu -5 307 1 2139 151 56 8 chr5 13702714 13703092 -185927058 + MSTD LTR MaLR 1 396 0 2457 36 4 0 chr5 13703517 13703797 -185926353 - AluY SINE Alu -7 304 24 239 247 49 35 chr5 13703804 13703905 -185926245 + MIR SINE MIR 64 162 -46 2342 171 58 18 chr5 13704184 13704633 -185925517 - MLT1C LTR MaLR 0 467 1 603 162 20 116 chr5 13705937 13706039 -185924111 + MER96B DNA MER1_type? 1 76 -341 455 116 70 0 chr5 13706039 13706125 -185924025 - L1MB3 LINE L1 -9 6174 6083 603 162 20 116 chr5 13706125 13706220 -185923930 + MER96B DNA MER1_type? 76 179 -238 285 236 14 0 chr5 13706280 13706352 -185923798 - MIR SINE MIR -115 147 75 191 325 0 26 chr5 13707055 13707132 -185923018 + L2 LINE L2 3185 3259 -13 290 370 16 16 chr5 13707286 13707470 -185922680 + MIR SINE MIR 8 191 -71 212 360 26 9 chr5 13708298 13708412 -185921738 - L2 LINE L2 -328 2944 2829 1152 276 95 9 chr5 13708689 13709142 -185921008 + L1MC4 LINE L1 5566 6057 -1985 * 2341 197 14 0 chr5 13708801 13709247 -185920903 + L1MB5 LINE L1 5716 6167 -7 2386 90 6 0 chr5 13711523 13711834 -185918316 - AluSq SINE Alu 0 313 1 1363 175 4 41 chr5 13713214 13713482 -185916668 + Tigger3(Golem) DNA MER2_type 2772 3029 0 2226 118 7 0 chr5 13713890 13714187 -185915963 + AluSx SINE Alu 1 299 -13 1988 189 52 18 chr5 13715553 13715998 -185914152 - MLT1C LTR MaLR -2 465 6 683 288 16 0 chr5 13722016 13722200 -185907950 + MER58A DNA MER1_type 30 216 -8 1974 131 0 11 chr5 13722778 13723061 -185907089 + AluSg SINE Alu 1 280 -30 180 111 0 0 chr5 13723065 13723092 -185907058 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 387 41 0 0 chr5 13723793 13723842 -185906308 + (CA)n Simple_repeat Simple_repeat 2 50 0 1293 208 79 22 chr5 13723963 13724444 -185905706 + MLT1F1 LTR MaLR 3 559 -8 1675 201 137 27 chr5 13724800 13725247 -185904903 - MLT1D LTR MaLR -8 497 2 183 80 0 0 chr5 13725350 13725375 -185904775 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 236 318 24 0 chr5 13725380 13725465 -185904685 - L2 LINE L2 -22 3291 3205 477 301 67 16 chr5 13725487 13725680 -185904470 + L2 LINE L2 2864 3066 -247 22 35 0 0 chr5 13726586 13726615 -185903535 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 13726982 13727024 -185903126 + AT_rich Low_complexity Low_complexity 1 42 0 2362 80 7 3 chr5 13727155 13727455 -185902695 - AluY SINE Alu -10 301 1 1693 181 0 32 chr5 13728605 13728914 -185901236 - AluJb SINE Alu -13 299 1 231 88 0 0 chr5 13729723 13729757 -185900393 + (GA)n Simple_repeat Simple_repeat 1 34 0 2050 176 74 49 chr5 13729810 13730282 -185899868 + MER110 LTR ERV1 8 491 0 466 230 197 7 chr5 13730885 13731037 -185899113 - MIR SINE MIR -3 259 79 359 204 20 20 chr5 13731295 13731393 -185898757 - L1MA8 LINE L1 -5 6286 6189 324 70 0 0 chr5 13731470 13731513 -185898637 + (CA)n Simple_repeat Simple_repeat 2 44 0 2605 129 3 6 chr5 13731652 13732017 -185898133 - THE1B LTR MaLR 0 364 1 239 351 92 7 chr5 13732086 13732270 -185897880 - MIR SINE MIR -57 205 6 268 315 82 20 chr5 13732652 13732798 -185897352 - L2 LINE L2 -203 3069 2915 296 136 254 0 chr5 13732932 13732991 -185897159 - MADE1 DNA Mariner 0 80 7 299 271 17 59 chr5 13733010 13733128 -185897022 - MER5B DNA MER1_type -33 145 33 208 188 21 21 chr5 13733306 13733354 -185896796 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 234 260 65 65 chr5 13734068 13734191 -185895959 + LTR33 LTR ERVL 99 221 -300 200 346 59 20 chr5 13734440 13734541 -185895609 - L2 LINE L2 -508 2806 2702 678 223 0 7 chr5 13734649 13734788 -185895362 - L1MB5 LINE L1 -3 6171 6034 513 299 226 26 chr5 13734796 13735331 -185894819 - L2 LINE L2 -609 2705 2064 24 0 0 0 chr5 13736534 13736558 -185893592 + AT_rich Low_complexity Low_complexity 1 24 0 249 193 53 0 chr5 13736564 13736621 -185893529 - MIR SINE MIR -17 245 186 372 316 95 7 chr5 13736634 13736946 -185893204 - L1ME LINE L1 -453 5668 5318 30 77 0 0 chr5 13738412 13738477 -185891673 + AT_rich Low_complexity Low_complexity 1 65 0 186 405 101 0 chr5 13739292 13739440 -185890710 - L2 LINE L2 -4 3268 3106 1250 113 0 27 chr5 13740049 13740235 -185889915 + AluSg/x SINE Alu 132 312 0 645 122 0 0 chr5 13740344 13740426 -185889724 - AluS SINE Alu -228 84 3 26 0 0 0 chr5 13740656 13740682 -185889468 + AT_rich Low_complexity Low_complexity 1 26 0 1946 141 82 25 chr5 13740948 13741303 -185888847 + THE1C LTR MaLR 1 375 0 874 96 39 31 chr5 13742558 13743171 -185886979 + (TG)n Simple_repeat Simple_repeat 1 617 0 2365 102 0 3 chr5 13744454 13744767 -185885383 - AluSq SINE Alu -1 312 1 243 191 0 0 chr5 13744779 13744842 -185885308 + CT-rich Low_complexity Low_complexity 1 63 0 209 333 42 61 chr5 13746021 13746234 -185883916 + L2 LINE L2 2969 3177 -95 6675 92 13 13 chr5 13748160 13749538 -185880612 + L1PA10 LINE L1 4789 6166 -2 270 280 34 42 chr5 13749668 13749786 -185880364 + MLT1J LTR MaLR 358 474 -37 402 216 35 26 chr5 13749837 13749953 -185880197 + L2 LINE L2 3101 3217 -96 241 256 0 37 chr5 13750205 13750247 -185879903 + L2 LINE L2 3235 3274 -39 2446 168 26 16 chr5 13750247 13750676 -185879474 + Tigger2a DNA MER2_type 1 433 -1 241 256 0 37 chr5 13750676 13750715 -185879435 + L2 LINE L2 3274 3313 0 828 209 44 11 chr5 13751548 13751730 -185878420 + MER58A DNA MER1_type 37 224 0 882 276 107 31 chr5 13752378 13752986 -185877164 + MLT2F LTR ERVL 2 655 -8 1850 227 29 48 chr5 13753265 13753780 -185876370 + MLT1D LTR MaLR 1 505 0 768 265 70 90 chr5 13755444 13756075 -185874075 + HAL1 LINE L1 734 1351 -1156 450 229 251 16 chr5 13756154 13756337 -185873813 + HAL1 LINE L1 1557 1782 -725 233 238 99 50 chr5 13759729 13759830 -185870320 - MIR SINE MIR -22 240 135 23 0 0 0 chr5 13760324 13760347 -185869803 + AT_rich Low_complexity Low_complexity 1 23 0 2534 64 0 3 chr5 13761575 13761887 -185868263 - AluY SINE Alu 0 311 1 466 248 113 89 chr5 13761896 13762198 -185867952 + L2 LINE L2 3004 3312 -1 252 0 0 0 chr5 13762291 13762319 -185867831 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 2413 105 0 0 chr5 13763700 13764013 -185866137 - AluSq SINE Alu 0 313 1 743 67 0 0 chr5 13764340 13764459 -185865691 - AluSg/x SINE Alu 0 311 193 832 145 0 0 chr5 13764466 13764583 -185865567 - FLAM_C SINE Alu -16 117 1 201 164 16 33 chr5 13766088 13766149 -185864001 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 221 310 178 8 chr5 13766830 13766959 -185863191 + MIR SINE MIR 89 239 -23 3045 78 3 0 chr5 13767922 13768306 -185861844 + L1PA7 LINE L1 5770 6154 0 276 259 101 62 chr5 13768940 13769276 -185860874 + L1M4 LINE L1 4310 4658 -1488 366 228 26 35 chr5 13769775 13769889 -185860261 - L1ME LINE L1 -663 5499 5387 658 272 52 35 chr5 13769889 13770304 -185859846 + L1M4 LINE L1 4418 4836 -1310 2057 78 8 0 chr5 13770591 13770849 -185859301 + AluY SINE Alu 43 302 -9 1853 148 30 3 chr5 13771036 13771333 -185858817 + AluSx SINE Alu 5 309 -3 287 277 12 0 chr5 13771909 13771992 -185858158 + MER69 DNA AcHobo 2434 2517 -9 292 349 137 11 chr5 13772301 13772476 -185857674 - L2 LINE L2 -678 2636 2440 31 0 0 0 chr5 13772818 13772849 -185857301 + AT_rich Low_complexity Low_complexity 1 31 0 268 230 11 23 chr5 13774718 13774805 -185855345 + (TA)n Simple_repeat Simple_repeat 1 86 0 437 288 86 56 chr5 13775451 13775684 -185854466 + L2 LINE L2 2670 2909 -405 489 317 18 23 chr5 13775774 13775995 -185854155 + L2 LINE L2 3075 3294 -19 1623 209 45 73 chr5 13777111 13777630 -185852520 + MLT1D LTR MaLR 2 567 0 296 264 76 69 chr5 13778618 13778762 -185851388 - MER70-int LTR ERVL -2933 2090 1946 425 120 43 0 chr5 13778894 13778986 -185851164 + CT-rich Low_complexity Low_complexity 3 98 0 1431 206 109 6 chr5 13780379 13780690 -185849460 + MLT1D LTR MaLR 1 343 -162 1741 176 7 0 chr5 13783436 13783725 -185846425 + AluJb SINE Alu 5 295 -17 606 276 190 41 chr5 13786554 13786667 -185843483 + L2 LINE L2 2788 2883 -430 1269 240 88 30 chr5 13786667 13787108 -185843042 + MLT1C LTR MaLR 1 467 0 606 276 190 41 chr5 13787108 13787328 -185842822 + L2 LINE L2 2883 3069 -244 2578 138 14 8 chr5 13787328 13787690 -185842460 - THE1B LTR MaLR 0 364 1 606 276 190 41 chr5 13787690 13787818 -185842332 + L2 LINE L2 3069 3313 0 518 223 0 25 chr5 13788207 13788328 -185841822 - MIR SINE MIR -122 140 23 2143 111 3 40 chr5 13788968 13789292 -185840858 + AluSx SINE Alu 1 312 0 1899 148 21 0 chr5 13789397 13789688 -185840462 - AluJo SINE Alu -15 297 1 929 193 6 11 chr5 13790269 13790445 -185839705 + AluJo SINE Alu 122 296 -16 258 32 0 0 chr5 13790551 13790582 -185839568 + (TG)n Simple_repeat Simple_repeat 2 32 0 363 193 0 0 chr5 13790582 13790665 -185839485 + (TA)n Simple_repeat Simple_repeat 2 84 0 186 133 0 0 chr5 13790708 13790738 -185839412 + (CATATA)n Simple_repeat Simple_repeat 5 34 0 2898 16 0 0 chr5 13790974 13791287 -185838863 + L1PA2 LINE L1 5841 6153 -2 1452 148 135 13 chr5 13791856 13792159 -185837991 + THE1C LTR MaLR 1 340 -35 2599 138 4 13 chr5 13792160 13792602 -185837548 + THE1C-int LTR MaLR 5 523 -1128 2189 99 50 0 chr5 13793407 13793690 -185836460 + AluSc SINE Alu 1 297 -12 4139 256 68 30 chr5 13795871 13797363 -185832787 + L1MEc LINE L1 36 1583 -4813 2432 125 15 9 chr5 13797451 13797786 -185832364 - MER1B DNA MER1_type 0 337 1 2061 119 3 0 chr5 13798150 13798443 -185831707 - AluSx SINE Alu -18 294 1 442 335 62 5 chr5 13798903 13799127 -185831023 - MLT1J1 LTR MaLR -2 444 208 265 270 110 10 chr5 13803325 13803425 -185826725 + MIR SINE MIR 83 192 -70 552 182 40 40 chr5 13805973 13806121 -185824029 - L2 LINE L2 -8 3305 3158 1862 125 40 3 chr5 13806168 13806465 -185823685 - L1MB5 LINE L1 0 6174 5867 5351 166 25 28 chr5 13806487 13806543 -185823607 - L1MA7 LINE L1 -10 6281 6226 1261 168 58 13 chr5 13806543 13806769 -185823381 + MER46A DNA MER2_type 1 236 0 5351 166 25 28 chr5 13806769 13807044 -185823106 - L1MA7 LINE L1 -65 6226 5952 420 37 0 0 chr5 13807044 13807098 -185823052 + (TG)n Simple_repeat Simple_repeat 1 54 0 1873 146 4 7 chr5 13807098 13807378 -185822772 - AluSx SINE Alu -33 279 1 5351 166 25 28 chr5 13807378 13808402 -185821748 - L1MA7 LINE L1 -337 5954 4923 237 344 149 0 chr5 13808402 13808623 -185821527 - L2 LINE L2 -233 3080 2827 1574 287 120 15 chr5 13809987 13811037 -185819113 + L2 LINE L2 2142 3299 -14 225 341 0 12 chr5 13812106 13812188 -185817962 + L2 LINE L2 3191 3271 -1 1614 177 0 43 chr5 13816615 13816915 -185813235 - AluSx SINE Alu -25 287 1 267 203 0 0 chr5 13817169 13817233 -185812917 + C-rich Low_complexity Low_complexity 1 64 0 880 270 81 12 chr5 13817269 13817591 -185812559 - L1MCc LINE L1 -4603 2519 2176 719 283 38 47 chr5 13817587 13818256 -185811894 - L1MCc LINE L1 -4887 1536 1171 * 419 118 12 0 chr5 13818439 13818524 -185811626 + (TC)n Simple_repeat Simple_repeat 1 86 0 213 331 23 77 chr5 13819119 13819229 -185810921 + L2 LINE L2 3142 3246 -26 2459 55 0 7 chr5 13819229 13819537 -185810613 - AluY SINE Alu -5 306 1 213 331 23 77 chr5 13819537 13819556 -185810594 + L2 LINE L2 3246 3264 -8 184 200 0 0 chr5 13819826 13819861 -185810289 - MER5B DNA MER1_type -6 172 138 267 257 14 29 chr5 13819875 13819945 -185810205 + MER5B DNA MER1_type 110 178 0 21 0 0 0 chr5 13820020 13820041 -185810109 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 13820268 13820289 -185809861 + AT_rich Low_complexity Low_complexity 1 21 0 4598 105 35 70 chr5 13821457 13821833 -185808317 - MER4E LTR ERV1 0 779 391 2331 106 0 0 chr5 13821833 13822134 -185808016 + AluSc SINE Alu 1 301 -8 4598 105 35 70 chr5 13822134 13822565 -185807585 - MER4E LTR ERV1 -388 391 1 2029 239 89 15 chr5 13824309 13825183 -185804967 - Charlie2 DNA MER1_type -16 2846 1908 471 204 88 15 chr5 13825330 13825467 -185804683 - Charlie2 DNA MER1_type -2675 187 41 640 271 261 28 chr5 13826041 13826162 -185803988 - L2 LINE L2 0 3313 3221 2152 139 0 0 chr5 13826162 13826465 -185803685 + AluSq SINE Alu 1 303 -10 640 271 261 28 chr5 13826465 13827225 -185802925 - L2 LINE L2 -92 3221 2199 265 227 0 15 chr5 13828253 13828319 -185801831 + (TA)n Simple_repeat Simple_repeat 2 66 0 2472 119 5 24 chr5 13828606 13828977 -185801173 - THE1B LTR MaLR 0 364 1 11123 97 8 0 chr5 13828985 13830544 -185799606 - THE1B-int LTR MaLR -8 1572 2 2501 111 5 24 chr5 13830545 13830916 -185799234 - THE1B LTR MaLR 0 364 1 231 239 22 87 chr5 13831219 13831357 -185798793 + MER5A DNA MER1_type 59 187 -2 741 172 0 8 chr5 13831554 13831676 -185798474 + FLAM_A SINE Alu 1 121 -12 24 32 0 0 chr5 13831676 13831707 -185798443 + AT_rich Low_complexity Low_complexity 1 31 0 255 197 49 0 chr5 13832554 13832615 -185797535 - LTR48 LTR ERV1 -50 737 674 21 36 0 0 chr5 13833379 13833407 -185796743 + AT_rich Low_complexity Low_complexity 1 28 0 470 309 40 17 chr5 13833783 13833958 -185796192 + MIR SINE MIR 71 249 -13 814 232 222 3 chr5 13835428 13835792 -185794358 - MER110A LTR ERV1 0 468 48 21 57 0 0 chr5 13836279 13836314 -185793836 + AT_rich Low_complexity Low_complexity 1 35 0 2321 179 94 6 chr5 13837089 13837602 -185792548 - MER89 LTR ERV1 0 559 2 1014 215 9 18 chr5 13839093 13839312 -185790838 + MER20 DNA MER1_type 1 217 -2 262 0 26 26 chr5 13841307 13841346 -185788804 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr5 13841420 13841443 -185788707 + AT_rich Low_complexity Low_complexity 1 23 0 2120 181 60 18 chr5 13841653 13842100 -185788050 - MLT1C LTR MaLR 0 467 2 766 229 28 51 chr5 13842339 13842592 -185787558 + MLT1D LTR MaLR 1 247 -258 2171 174 36 7 chr5 13842604 13843017 -185787133 + MSTB1 LTR MaLR 8 432 0 442 248 141 27 chr5 13843065 13843214 -185786936 + MLT1C LTR MaLR 337 464 -3 186 43 0 0 chr5 13843606 13843629 -185786521 + (TA)n Simple_repeat Simple_repeat 1 23 0 313 157 31 164 chr5 13846150 13846309 -185783841 + MER103 DNA DNA 15 152 -14 1341 112 0 0 chr5 13847900 13848079 -185782071 - AluSg/x SINE Alu -5 307 129 2137 134 3 3 chr5 13848085 13848391 -185781759 - AluSx SINE Alu -6 306 1 279 79 0 0 chr5 13849061 13849099 -185781051 + (CTTG)n Simple_repeat Simple_repeat 2 39 0 2084 148 3 26 chr5 13849634 13849979 -185780171 - MER1B DNA MER1_type 0 337 1 1499 130 126 15 chr5 13851482 13851743 -185778407 + AluSg1 SINE Alu 1 290 -19 1742 209 41 53 chr5 13852540 13853047 -185777103 + MLT1D LTR MaLR 1 501 -4 2225 8 0 0 chr5 13853047 13853295 -185776855 + L1PA3 LINE L1 5904 6151 -4 240 35 0 0 chr5 13854315 13854344 -185775806 + (TTG)n Simple_repeat Simple_repeat 1 29 0 2042 117 0 4 chr5 13854348 13854622 -185775528 - AluSg SINE Alu -37 273 1 1381 235 201 4 chr5 13855044 13855507 -185774643 - L1MD2 LINE L1 -13 6346 5793 11422 160 42 26 chr5 13855988 13856074 -185774076 + L1M4c LINE L1 17 100 -6284 1924 220 30 65 chr5 13856074 13856646 -185773504 - MLT2B3 LTR ERVL -2 552 1 11422 160 42 26 chr5 13856646 13859005 -185771145 + L1M4c LINE L1 100 2500 -3884 2073 168 58 32 chr5 13859008 13859164 -185770986 + L1MB2 LINE L1 5658 5808 -363 1819 172 3 3 chr5 13859164 13859460 -185770690 + AluSx SINE Alu 3 298 -14 2073 168 58 32 chr5 13859460 13859802 -185770348 + L1MB2 LINE L1 5808 6169 -2 204 40 0 0 chr5 13860543 13860568 -185769582 + (CA)n Simple_repeat Simple_repeat 2 26 0 795 93 0 9 chr5 13860864 13860971 -185769179 - U6 snRNA snRNA -1 106 1 2185 129 10 0 chr5 13861514 13861823 -185768327 + AluSx SINE Alu 1 312 0 474 247 65 49 chr5 13864799 13864991 -185765159 - MIR SINE MIR 0 262 62 181 257 64 73 chr5 13865822 13865931 -185764219 + MIR SINE MIR 21 128 -134 215 178 22 0 chr5 13867896 13867941 -185762209 + (TA)n Simple_repeat Simple_repeat 1 46 0 574 172 0 0 chr5 13868958 13869051 -185761099 - Tigger1 DNA MER2_type 0 2418 2326 * 4707 136 14 8 chr5 13869048 13869164 -185760986 - Tigger1 DNA MER2_type -1548 870 756 2427 77 7 0 chr5 13869164 13869463 -185760687 + AluSg SINE Alu 1 301 -9 4707 136 14 8 chr5 13869463 13870069 -185760081 - Tigger1 DNA MER2_type -1662 756 144 320 314 0 0 chr5 13870526 13870628 -185759522 + L1MC4 LINE L1 6593 6694 -1348 2047 114 3 23 chr5 13871094 13871393 -185758757 + AluSx SINE Alu 1 293 -19 1100 173 117 5 chr5 13871946 13872160 -185757990 + MER8 DNA MER2_type 2 239 0 416 337 103 16 chr5 13874435 13874687 -185755463 - L3 LINE CR1 -98 1479 1206 965 187 79 128 chr5 13874690 13875196 -185754954 - MER39 LTR ERV1 0 707 1 410 383 17 0 chr5 13875205 13875435 -185754715 - L3 LINE CR1 -394 1183 950 252 224 13 26 chr5 13875467 13875543 -185754607 + MIR SINE MIR 50 124 -138 198 0 0 0 chr5 13876167 13876189 -185753961 + (CAT)n Simple_repeat Simple_repeat 2 23 0 2245 118 0 10 chr5 13876654 13876967 -185753183 + AluSx SINE Alu 1 310 -2 572 227 68 0 chr5 13879066 13879229 -185750921 - MER69A DNA AcHobo -3 174 1 1609 187 17 43 chr5 13879658 13880005 -185750145 - MLT1D LTR MaLR -166 339 2 246 299 13 39 chr5 13880138 13880215 -185749935 - MLT1J LTR MaLR -234 277 203 21 36 0 0 chr5 13881183 13881211 -185748939 + AT_rich Low_complexity Low_complexity 1 28 0 362 245 44 57 chr5 13881591 13881750 -185748400 - MLT1J2 LTR MaLR -26 424 268 311 248 47 54 chr5 13881766 13881895 -185748255 - MLT1J1 LTR MaLR -280 166 39 748 52 21 0 chr5 13882197 13882293 -185747857 - L1PA7 LINE L1 -1 6153 6056 637 310 135 34 chr5 13882296 13882979 -185747171 + L2 LINE L2 2196 2947 -367 2170 108 19 32 chr5 13883374 13883689 -185746461 - AluSp SINE Alu -2 311 1 228 286 176 8 chr5 13886654 13886773 -185743377 - L2 LINE L2 -2 3270 3132 499 208 20 67 chr5 13887231 13887380 -185742770 + MER5B DNA MER1_type 1 142 -36 2333 95 0 0 chr5 13887636 13887930 -185742220 - AluSg SINE Alu -16 294 1 1615 158 66 39 chr5 13889205 13889540 -185740610 + MER2 DNA MER2_type 1 344 0 2449 84 0 0 chr5 13890562 13890859 -185739291 - AluSc SINE Alu -12 297 1 185 277 79 98 chr5 13891087 13891274 -185738876 + L2 LINE L2 109 298 -3016 2289 116 0 0 chr5 13891274 13891575 -185738575 + AluSc SINE Alu 1 301 -8 185 277 79 98 chr5 13891575 13891817 -185738333 + L2 LINE L2 298 530 -2784 1187 280 135 56 chr5 13891980 13893350 -185736800 + L2 LINE L2 1132 2609 -705 261 206 0 63 chr5 13893687 13893876 -185736274 + C-rich Low_complexity Low_complexity 2 178 0 289 203 236 32 chr5 13894572 13894695 -185735455 + HAL1 LINE L1 2360 2507 0 367 176 10 88 chr5 13894710 13894812 -185735338 + L1ME4a LINE L1 5966 6059 -62 2151 107 0 0 chr5 13895953 13896264 -185733886 + AluSx SINE Alu 1 312 0 203 308 19 67 chr5 13898134 13898238 -185731912 - MER5B DNA MER1_type -75 103 5 205 333 104 9 chr5 13898718 13898835 -185731315 - MER5A DNA MER1_type -51 138 1 236 157 39 20 chr5 13899532 13899583 -185730567 + GA-rich Low_complexity Low_complexity 5 56 0 376 108 18 63 chr5 13900444 13900555 -185729595 + (GGGGA)n Simple_repeat Simple_repeat 2 107 0 234 156 0 0 chr5 13902206 13902251 -185727899 + (TGG)n Simple_repeat Simple_repeat 1 45 0 2220 106 0 0 chr5 13903047 13903379 -185726771 - AluSx SINE Alu 0 332 1 227 249 50 138 chr5 13903858 13904119 -185726031 - L2 LINE L2 0 3313 3076 296 311 95 48 chr5 13904158 13904537 -185725613 - L2 LINE L2 -337 2977 2581 3786 145 22 16 chr5 13904876 13905559 -185724591 - L1MA4 LINE L1 -8 6292 5606 240 59 0 0 chr5 13906550 13906584 -185723566 + (TG)n Simple_repeat Simple_repeat 2 35 0 273 242 0 105 chr5 13906915 13907010 -185723140 + MER5A DNA MER1_type 9 93 -96 224 30 30 0 chr5 13907100 13907133 -185723017 + (TTA)n Simple_repeat Simple_repeat 3 36 0 6892 54 11 0 chr5 13907133 13908470 -185721680 - L1PA7 LINE L1 -18 6136 4788 2007 159 0 0 chr5 13910418 13910713 -185719437 + AluJb SINE Alu 1 295 -17 1152 176 5 0 chr5 13911083 13911271 -185718879 - MER5A DNA MER1_type 0 189 1 430 259 23 30 chr5 13912580 13912711 -185717439 + MIR SINE MIR 15 144 -118 213 94 0 0 chr5 13912723 13912755 -185717395 + (TGGA)n Simple_repeat Simple_repeat 2 33 0 821 153 0 21 chr5 13913660 13913804 -185716346 + L1MB4 LINE L1 5666 5806 -374 325 204 126 68 chr5 13913796 13913899 -185716251 - L1PB4 LINE L1 -3 6153 6045 * 1747 168 55 26 chr5 13913899 13914281 -185715869 + L1MB4 LINE L1 5787 6179 -1 201 129 0 0 chr5 13915735 13915766 -185714384 + (TG)n Simple_repeat Simple_repeat 2 32 0 210 133 67 22 chr5 13917079 13917169 -185712981 + (TAGA)n Simple_repeat Simple_repeat 3 96 0 495 295 78 0 chr5 13918547 13918764 -185711386 + MER46C DNA MER2_type 84 317 -21 954 217 14 27 chr5 13919567 13919788 -185710362 - MER20 DNA MER1_type 0 219 2 747 203 0 0 chr5 13920112 13920225 -185709925 + FLAM_A SINE Alu 3 118 -184 241 111 0 0 chr5 13920225 13920261 -185709889 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 735 234 86 11 chr5 13920368 13920543 -185709607 - MER5A DNA MER1_type -1 188 1 459 205 0 0 chr5 13920598 13920681 -185709469 + MER5A DNA MER1_type 9 91 -98 2368 79 7 0 chr5 13921948 13922240 -185707910 + AluSp SINE Alu 1 294 -19 625 277 149 74 chr5 13923003 13923555 -185706595 - MLT1G1 LTR MaLR -2 593 1 268 253 69 0 chr5 13923770 13923857 -185706293 + MLT1L LTR MaLR 368 460 -155 2490 141 171 44 chr5 13925200 13925591 -185704559 - LTR18B LTR ERVL 0 614 133 2195 108 0 10 chr5 13925591 13925886 -185704264 + AluSq SINE Alu 1 292 -21 2490 141 171 44 chr5 13925886 13926039 -185704111 - LTR18B LTR ERVL -481 133 1 2300 107 13 0 chr5 13926142 13926442 -185703708 - AluSp SINE Alu -9 304 1 439 179 143 9 chr5 13926450 13926562 -185703588 - MER53 DNA DNA -62 127 1 26 30 0 0 chr5 13926693 13926726 -185703424 + AT_rich Low_complexity Low_complexity 1 33 0 180 295 32 42 chr5 13926763 13926858 -185703292 + MIR SINE MIR 89 182 -80 1904 203 47 19 chr5 13926884 13927308 -185702842 + MER63B DNA MER1_type 1 436 0 4981 165 25 27 chr5 13927384 13927742 -185702408 - L1MB1 LINE L1 -9 6159 5802 849 195 87 0 chr5 13927742 13927891 -185702259 - FAM SINE Alu -12 163 2 4981 165 25 27 chr5 13927891 13928087 -185702063 - L1MB1 LINE L1 -366 5802 5607 2404 110 48 28 chr5 13928087 13928442 -185701708 - THE1B LTR MaLR 0 364 3 4981 165 25 27 chr5 13928442 13929354 -185700796 - L1MB1 LINE L1 -561 5607 4697 647 165 0 0 chr5 13929358 13929473 -185700677 + L1MB1 LINE L1 4567 4681 -1465 1893 192 149 11 chr5 13930179 13930622 -185699528 - MLT1D LTR MaLR -1 504 1 2167 99 7 0 chr5 13930688 13930972 -185699178 - AluSq SINE Alu -2 311 26 1996 189 16 13 chr5 13931456 13931832 -185698318 + MLT1B LTR MaLR 1 377 -13 478 210 94 22 chr5 13932330 13932468 -185697682 + MLT1C LTR MaLR 6 153 -314 429 266 76 13 chr5 13932541 13932699 -185697451 + LTR52 LTR ERVL 254 421 0 363 284 113 7 chr5 13933551 13933692 -185696458 - MLT1K LTR MaLR -57 531 376 457 253 79 42 chr5 13933868 13934058 -185696092 - MIR SINE MIR -7 255 59 260 323 169 10 chr5 13934074 13934275 -185695875 - L3 LINE CR1 -2 1575 1343 414 248 23 38 chr5 13934276 13934409 -185695741 - L3 LINE CR1 -546 1031 901 4065 88 13 2 chr5 13934847 13935379 -185694771 - L1PB1 LINE L1 -4 6147 5610 2136 176 16 11 chr5 13935429 13935792 -185694358 - MLT1A1 LTR MaLR 0 365 1 459 267 17 17 chr5 13935792 13935908 -185694242 + MIR3 SINE MIR 66 181 -27 2287 150 109 10 chr5 13937298 13937691 -185692459 + MSTB1 LTR MaLR 1 432 0 302 272 67 67 chr5 13937706 13937901 -185692249 - LTR67 LTR ERVL -293 264 70 412 277 86 15 chr5 13938146 13938449 -185691701 + L1MEc LINE L1 49 396 -6000 1485 190 95 15 chr5 13938449 13938786 -185691364 + MLT1A1 LTR MaLR 2 365 0 412 277 86 15 chr5 13938786 13938805 -185691345 + L1MEc LINE L1 396 412 -5984 603 312 51 38 chr5 13939386 13939623 -185690527 + MLT1K LTR MaLR 7 246 -342 326 271 135 29 chr5 13939701 13939871 -185690279 + MLT1K LTR MaLR 375 562 -26 1981 144 0 10 chr5 13940641 13940933 -185689217 - AluSx SINE Alu -19 293 5 1871 240 45 0 chr5 13941815 13942286 -185687864 + MLT1D LTR MaLR 7 498 -7 2549 129 22 0 chr5 13943730 13944086 -185686064 + THE1B LTR MaLR 1 364 0 182 337 22 45 chr5 13944221 13944310 -185685840 + L2 LINE L2 3168 3254 -18 200 215 32 21 chr5 13945502 13945595 -185684555 + GA-rich Low_complexity Low_complexity 3 96 0 5381 145 7 61 chr5 13945605 13945621 -185684529 - MER49 LTR ERV1 -3 920 905 2413 44 3 7 chr5 13945621 13945915 -185684235 + AluY SINE Alu 1 293 -18 5381 145 7 61 chr5 13945915 13946756 -185683394 - MER49 LTR ERV1 -18 905 118 5457 53 5 2 chr5 13946756 13947397 -185682753 - L1PA8 LINE L1 -4 6168 5526 5381 145 7 61 chr5 13947397 13947510 -185682640 - MER49 LTR ERV1 -805 118 1 2462 67 0 0 chr5 13948820 13949119 -185681031 + AluY SINE Alu 1 299 -12 452 298 93 27 chr5 13949456 13949681 -185680469 + MIR SINE MIR 10 249 -13 263 295 54 27 chr5 13949763 13949912 -185680238 - L1ME2 LINE L1 -5 6161 6009 393 274 47 0 chr5 13950322 13950428 -185679722 + L2 LINE L2 3203 3313 0 2126 112 0 25 chr5 13951201 13951515 -185678635 - AluSx SINE Alu -4 308 3 182 222 28 0 chr5 13951518 13951554 -185678596 - L3b LINE CR1 -108 1475 1439 28 0 0 0 chr5 13952145 13952173 -185677977 + AT_rich Low_complexity Low_complexity 1 28 0 180 354 0 0 chr5 13954485 13954533 -185675617 + L2 LINE L2 3221 3268 -4 482 298 137 0 chr5 13955747 13955908 -185674242 + MER5A DNA MER1_type 4 186 -3 203 310 14 0 chr5 13956053 13956124 -185674026 + GA-rich Low_complexity Low_complexity 4 75 0 1150 141 0 0 chr5 13956448 13956618 -185673532 + LTR45B LTR ERV1 1 170 -319 4384 74 7 0 chr5 13956624 13957177 -185672973 - HERVL LTR ERVL -1080 4574 4018 524 234 30 85 chr5 13957518 13957719 -185672431 + MLT1C LTR MaLR 3 192 -275 262 224 41 61 chr5 13957943 13958041 -185672109 + L1MEd LINE L1 373 468 -5737 906 296 85 44 chr5 13958209 13959048 -185671102 + L1MEd LINE L1 791 1663 -4733 28 0 0 0 chr5 13959120 13959148 -185671002 + AT_rich Low_complexity Low_complexity 1 28 0 1629 278 88 14 chr5 13959509 13960237 -185669913 + L1MEd LINE L1 2179 2960 -3255 7566 55 6 1 chr5 13960781 13962425 -185667725 - L1PA6 LINE L1 -1 6153 4504 2005 137 0 0 chr5 13962428 13962735 -185667415 - L1P3 LINE L1 -4804 1657 1351 327 243 107 14 chr5 13962832 13962972 -185667178 + L3 LINE CR1 1220 1372 -205 257 259 133 30 chr5 13964063 13964198 -185665952 + L3 LINE CR1 1376 1524 -53 641 143 20 10 chr5 13964695 13964793 -185665357 - AluJb SINE Alu -19 293 195 2089 101 11 4 chr5 13965668 13965945 -185664205 - AluSq SINE Alu -34 279 1 688 233 34 45 chr5 13966050 13966226 -185663924 - MER5B DNA MER1_type -3 175 2 1629 152 99 9 chr5 13969344 13969667 -185660483 + L1MA8 LINE L1 5935 6286 -5 415 13 13 53 chr5 13970318 13970394 -185659756 + (TTTTA)n Simple_repeat Simple_repeat 2 74 0 2435 59 0 0 chr5 13970397 13970684 -185659466 - AluY SINE Alu -24 287 1 205 235 39 0 chr5 13970763 13970814 -185659336 + L2 LINE L2 3261 3313 0 350 303 99 7 chr5 13972490 13972632 -185657518 + MIR SINE MIR 38 192 -70 256 220 0 0 chr5 13973457 13973507 -185656643 - MER4-int LTR ERV1 -5438 1160 1111 352 205 9 18 chr5 13973510 13973622 -185656528 + (CATA)n Simple_repeat Simple_repeat 1 111 0 886 123 11 22 chr5 13974664 13974843 -185655307 + (TTCC)n Simple_repeat Simple_repeat 3 179 0 198 303 0 0 chr5 13974833 13974922 -185655228 + T-rich Low_complexity Low_complexity 1 89 0 * 1975 168 48 0 chr5 13974926 13975277 -185654873 - L1MB2 LINE L1 -2 6169 5802 505 160 160 0 chr5 13975529 13975629 -185654521 + MLT1A1 LTR MaLR 172 287 -78 189 310 0 0 chr5 13976062 13976120 -185654030 - MER5B DNA MER1_type -85 93 36 1088 262 149 19 chr5 13976186 13976717 -185653433 + L2 LINE L2 1512 2111 -1203 592 288 211 3 chr5 13976714 13977065 -185653085 + L2 LINE L2 2868 3291 -22 * 379 309 208 10 chr5 13977593 13977800 -185652350 - MIR SINE MIR -1 261 14 394 212 50 10 chr5 13977831 13977930 -185652220 - L1MB2 LINE L1 -460 5661 5559 325 279 122 34 chr5 13977936 13978083 -185652067 - L1MB2 LINE L1 -681 5497 5338 30 27 0 0 chr5 13978273 13978310 -185651840 + AT_rich Low_complexity Low_complexity 1 37 0 813 164 0 15 chr5 13978494 13978628 -185651522 - FLAM_A SINE Alu 0 133 2 267 316 46 17 chr5 13979274 13979448 -185650702 + L1ME3A LINE L1 5744 5922 -248 1520 151 52 66 chr5 13979505 13979715 -185650435 - AluJo SINE Alu -11 301 95 2375 133 30 25 chr5 13979715 13980077 -185650073 - THE1B LTR MaLR 0 364 1 1520 151 52 66 chr5 13980077 13980171 -185649979 - AluJo SINE Alu -217 95 1 236 287 50 30 chr5 13980233 13980334 -185649816 + L1ME3A LINE L1 5980 6082 -88 281 300 49 38 chr5 13980338 13980605 -185649545 - L1MB2 LINE L1 -1767 4379 4110 405 272 112 42 chr5 13980791 13981175 -185648975 - L1MB2 LINE L1 -2166 3980 3566 192 77 0 0 chr5 13982529 13982555 -185647595 + (TTAAA)n Simple_repeat Simple_repeat 5 30 0 22 0 0 0 chr5 13982583 13982605 -185647545 + AT_rich Low_complexity Low_complexity 1 22 0 261 309 73 44 chr5 13982953 13983089 -185647061 + L2 LINE L2 3169 3308 -5 276 338 114 27 chr5 13983185 13983404 -185646746 - L3 LINE CR1 -81 1496 1259 328 283 43 0 chr5 13983421 13983513 -185646637 - MIR SINE MIR -108 154 59 202 350 67 17 chr5 13983544 13983664 -185646486 + L2 LINE L2 3147 3272 0 21 57 0 0 chr5 13986430 13986465 -185643685 + AT_rich Low_complexity Low_complexity 1 35 0 1502 160 81 138 chr5 13986497 13986990 -185643160 - MER4C LTR ERV1 0 465 1 239 217 0 0 chr5 13987856 13987902 -185642248 + L2 LINE L2 2609 2654 -660 475 302 157 15 chr5 13987934 13988202 -185641948 + L2 LINE L2 3005 3310 -3 296 347 92 34 chr5 13988634 13988896 -185641254 + L2 LINE L2 2994 3270 -2 1677 179 100 39 chr5 13989706 13990115 -185640035 + Tigger2a DNA MER2_type 1 434 0 1889 108 7 54 chr5 13990733 13990887 -185639263 + MLT2A2 LTR ERVL 1 136 -317 2010 134 28 0 chr5 13990887 13991178 -185638972 - AluSx SINE Alu -13 299 1 1889 108 7 54 chr5 13991178 13991320 -185638830 + MLT2A2 LTR ERVL 136 283 -170 377 234 52 73 chr5 13991988 13992180 -185637970 - L2 LINE L2 0 3313 3126 2120 117 0 41 chr5 13992794 13993111 -185637039 + AluSg SINE Alu 1 304 -6 909 108 23 0 chr5 13993115 13993245 -185636905 + AluSq/x SINE Alu 1 133 -180 479 311 68 0 chr5 13993250 13993411 -185636739 - MIR SINE MIR -56 206 35 207 0 0 0 chr5 13993990 13994013 -185636137 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 199 361 28 49 chr5 13995075 13995219 -185634931 + MER5A DNA MER1_type 20 160 -29 * 211 346 39 29 chr5 13995143 13995247 -185634903 - MER5B DNA MER1_type -73 105 1 541 157 17 0 chr5 13996122 13996237 -185633913 + (TA)n Simple_repeat Simple_repeat 1 117 0 21 0 0 0 chr5 13996385 13996406 -185633744 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr5 13996472 13996495 -185633655 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1994 184 28 31 chr5 13996763 13997154 -185632996 - MLT1B LTR MaLR 0 390 1 2330 86 7 0 chr5 13997683 13997973 -185632177 - AluSc SINE Alu -17 292 1 180 200 12 129 chr5 13998216 13998301 -185631849 + L2 LINE L2 3133 3207 -65 471 221 68 55 chr5 13998880 13998998 -185631152 + L1ME3A LINE L1 5998 6120 -50 2523 121 11 35 chr5 13998998 13999371 -185630779 + THE1B LTR MaLR 1 364 0 471 221 68 55 chr5 13999371 13999415 -185630735 + L1ME3A LINE L1 6120 6162 -8 1655 202 144 7 chr5 13999685 14000121 -185630029 + LTR54B LTR ERV1 1 496 -2 345 351 82 10 chr5 14000341 14000549 -185629601 + MIR SINE MIR 32 254 -8 328 247 286 0 chr5 14000652 14000806 -185629344 + MIR SINE MIR 50 247 -15 491 196 20 72 chr5 14000949 14001045 -185629105 - L1MDa LINE L1 -3662 2878 2791 2536 118 28 6 chr5 14001045 14001401 -185628749 + THE1B LTR MaLR 1 364 0 491 196 20 72 chr5 14001401 14001457 -185628693 - L1MDa LINE L1 -3749 2791 2734 469 188 46 151 chr5 14001488 14001706 -185628444 + MIR SINE MIR 58 252 -10 207 100 0 0 chr5 14001976 14002006 -185628144 + (A)n Simple_repeat Simple_repeat 1 30 0 2103 101 7 0 chr5 14002533 14002809 -185627341 - AluSq SINE Alu -32 281 4 305 279 54 0 chr5 14003552 14003681 -185626469 - L1MDa LINE L1 -4100 2440 2305 3601 41 4 82 chr5 14003684 14004170 -185625980 - L1PA7 LINE L1 0 6154 5707 1027 239 56 54 chr5 14004337 14004837 -185625313 - L1MEc LINE L1 -3669 2546 2100 1744 76 0 5 chr5 14005135 14005359 -185624791 - AluSp SINE Alu -6 307 85 494 237 58 64 chr5 14005572 14005745 -185624405 + MER5B DNA MER1_type 4 175 -3 787 191 125 0 chr5 14005922 14006090 -185624060 + MER20 DNA MER1_type 31 219 0 3182 131 50 27 chr5 14007589 14008175 -185621975 - L1MA8 LINE L1 -3 6288 5690 183 218 0 0 chr5 14008478 14008533 -185621617 + (TGAA)n Simple_repeat Simple_repeat 4 58 0 326 326 90 31 chr5 14009267 14009357 -185620793 + MIR SINE MIR 1 84 -178 1760 179 127 21 chr5 14009357 14009775 -185620375 - MER31B LTR ERV1 0 466 5 326 326 90 31 chr5 14009775 14009920 -185620230 + MIR SINE MIR 84 249 -13 356 243 171 7 chr5 14010107 14010247 -185619903 + MER110A LTR ERV1 8 170 -298 388 270 55 98 chr5 14010344 14010585 -185619565 + MER110 LTR ERV1 194 421 -70 2508 199 26 59 chr5 14010585 14011157 -185618993 + MLT2B3 LTR ERVL 2 554 0 388 270 55 98 chr5 14011157 14011222 -185618928 + MER110 LTR ERV1 421 487 -4 2174 256 56 21 chr5 14013597 14014014 -185616136 + L1ME LINE L1 4796 5197 -967 1994 179 19 16 chr5 14014014 14014378 -185615772 - MLT1A1 LTR MaLR 0 365 1 2174 256 56 21 chr5 14014378 14014941 -185615209 + L1ME LINE L1 5197 5816 -348 244 291 45 62 chr5 14014936 14015115 -185615035 + L1MC/D LINE L1 5654 5829 -1979 * 283 289 12 0 chr5 14015279 14015362 -185614788 + MER81 DNA DNA 2 85 -29 1690 120 0 0 chr5 14015516 14015750 -185614400 - AluSx SINE Alu -16 296 63 212 375 10 0 chr5 14015855 14015959 -185614191 + L2 LINE L2 3207 3311 -2 2675 119 5 13 chr5 14016730 14017108 -185613042 + THE1C LTR MaLR 1 375 0 529 284 52 16 chr5 14017728 14018112 -185612038 + MLT1G1 LTR MaLR 158 549 0 240 135 216 0 chr5 14018206 14018280 -185611870 - L1MB7 LINE L1 -5 6179 6090 2104 185 15 10 chr5 14018283 14018383 -185611767 - L1MB7 LINE L1 -193 5985 5886 847 266 80 11 chr5 14018383 14018788 -185611362 - L1PB4 LINE L1 -272 5884 5447 30 27 0 0 chr5 14018857 14018894 -185611256 + AT_rich Low_complexity Low_complexity 1 37 0 408 40 0 0 chr5 14019710 14019760 -185610390 + (TG)n Simple_repeat Simple_repeat 2 51 0 265 342 171 0 chr5 14019760 14019912 -185610238 + L3 LINE CR1 1391 1568 -9 2429 120 25 33 chr5 14021671 14021997 -185608153 + THE1B LTR MaLR 1 325 -39 2026 114 13 17 chr5 14021997 14022296 -185607854 - AluSx SINE Alu -14 298 1 2429 120 25 33 chr5 14022296 14022336 -185607814 + THE1B LTR MaLR 325 364 0 2175 121 3 3 chr5 14022420 14022727 -185607423 + AluSx SINE Alu 1 307 -5 1023 167 0 0 chr5 14022728 14022884 -185607266 + AluSg/x SINE Alu 127 327 0 364 44 0 0 chr5 14022884 14022929 -185607221 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 24 32 0 0 chr5 14023267 14023298 -185606852 + AT_rich Low_complexity Low_complexity 1 31 0 296 365 24 8 chr5 14024234 14024360 -185605790 + L3 LINE CR1 366 493 -1084 2391 73 0 22 chr5 14024651 14024964 -185605186 - AluY SINE Alu -5 306 1 255 332 70 2 chr5 14024969 14025140 -185605010 - MIR SINE MIR -62 146 5 2252 114 0 16 chr5 14025982 14026290 -185603860 - AluSg SINE Alu -7 303 1 21 0 0 0 chr5 14026915 14026936 -185603214 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr5 14027007 14027055 -185603095 + AT_rich Low_complexity Low_complexity 1 48 0 417 340 70 0 chr5 14027627 14027812 -185602338 - MIR SINE MIR 0 262 65 507 257 72 0 chr5 14027903 14028055 -185602095 + MIR SINE MIR 100 262 0 21 0 0 0 chr5 14028190 14028211 -185601939 + AT_rich Low_complexity Low_complexity 1 21 0 2103 110 34 3 chr5 14028231 14028522 -185601628 + AluSx SINE Alu 1 300 -12 2228 107 7 7 chr5 14029018 14029327 -185600823 - AluSc SINE Alu 0 309 1 24 0 0 0 chr5 14029560 14029584 -185600566 + AT_rich Low_complexity Low_complexity 1 24 0 884 200 85 0 chr5 14030593 14030828 -185599322 + L1ME1 LINE L1 5822 6076 -90 23 54 0 0 chr5 14031272 14031309 -185598841 + AT_rich Low_complexity Low_complexity 1 37 0 1035 174 0 0 chr5 14031375 14031536 -185598614 + AluJb SINE Alu 135 295 -17 2461 53 3 3 chr5 14032483 14032783 -185597367 - AluY SINE Alu -11 300 1 887 282 60 0 chr5 14032826 14033159 -185596991 + L1ME1 LINE L1 5809 6161 -5 1423 246 35 71 chr5 14033301 14033821 -185596329 - MLT1E LTR MaLR -46 547 47 312 328 84 0 chr5 14034033 14034164 -185595986 - L1ME4a LINE L1 -96 6025 5884 268 340 40 10 chr5 14036029 14036129 -185594021 + L2 LINE L2 3154 3256 -16 318 231 13 0 chr5 14037788 14037866 -185592284 + MLT1I LTR MaLR 329 407 -2 22 70 0 0 chr5 14037909 14037952 -185592198 + AT_rich Low_complexity Low_complexity 1 43 0 1722 164 10 16 chr5 14039285 14039595 -185590555 - AluSx SINE Alu -4 308 1 218 31 0 31 chr5 14040660 14040692 -185589458 + (TA)n Simple_repeat Simple_repeat 1 31 0 29 78 0 0 chr5 14040790 14040854 -185589296 + AT_rich Low_complexity Low_complexity 1 64 0 2342 91 0 0 chr5 14041115 14041413 -185588737 + AluSg SINE Alu 1 298 -12 337 264 221 24 chr5 14041545 14041753 -185588397 + L2 LINE L2 2563 2811 -503 207 281 16 16 chr5 14041841 14041905 -185588245 + L2 LINE L2 2997 3060 -253 496 301 87 18 chr5 14041954 14042173 -185587977 + MIR SINE MIR 8 241 -21 333 230 90 50 chr5 14042284 14042384 -185587766 + L2 LINE L2 3169 3272 0 1336 226 27 6 chr5 14043292 14043620 -185586530 + MER58B DNA MER1_type 2 336 -5 359 248 66 22 chr5 14043765 14043902 -185586248 + L1ME4a LINE L1 5823 5965 -156 2076 245 2 27 chr5 14044499 14044628 -185585522 - MER82 DNA MER2_type -140 513 382 2454 49 26 10 chr5 14044628 14044934 -185585216 - AluY SINE Alu 0 311 1 2076 245 2 27 chr5 14044934 14045327 -185584823 - MER82 DNA MER2_type -271 382 4 316 231 185 9 chr5 14045393 14045501 -185584649 - L2 LINE L2 -1 3312 3186 * 350 322 151 5 chr5 14045498 14045596 -185584554 - MIR SINE MIR -10 252 170 208 50 0 50 chr5 14045596 14045636 -185584514 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 350 322 151 5 chr5 14045636 14045736 -185584414 - MIR SINE MIR -92 170 25 921 251 0 0 chr5 14045741 14045944 -185584206 - MLT1A1 LTR MaLR -7 358 156 1822 123 4 14 chr5 14046271 14046548 -185583602 + AluSq SINE Alu 28 301 -12 1218 203 66 11 chr5 14047247 14047518 -185582632 - AluJo SINE Alu -16 296 11 28 48 0 0 chr5 14047539 14047581 -185582569 + AT_rich Low_complexity Low_complexity 1 42 0 2322 78 0 3 chr5 14047723 14048060 -185582090 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 14048301 14048322 -185581828 + AT_rich Low_complexity Low_complexity 1 21 0 2501 18 0 11 chr5 14048377 14048660 -185581490 - AluYb8 SINE Alu 0 318 39 190 303 66 13 chr5 14049838 14049914 -185580236 - MIR SINE MIR -71 191 112 223 219 87 0 chr5 14050332 14050408 -185579742 + MIR3 SINE MIR 99 159 -49 903 306 84 19 chr5 14050871 14051331 -185578819 + L2 LINE L2 2752 3253 -60 219 385 32 37 chr5 14051363 14051581 -185578569 - MIR SINE MIR -30 232 16 478 312 64 64 chr5 14051621 14051951 -185578199 - L2 LINE L2 -436 2878 2549 353 131 35 35 chr5 14052106 14052251 -185577899 + (TA)n Simple_repeat Simple_repeat 1 145 0 1942 163 0 3 chr5 14052775 14053082 -185577068 - AluJb SINE Alu -6 306 1 209 236 101 22 chr5 14053172 14053261 -185576889 + MIR SINE MIR 112 207 -55 2480 71 3 3 chr5 14054788 14055098 -185575052 + AluY SINE Alu 1 310 -1 265 260 39 0 chr5 14055233 14055310 -185574840 - MIR3 SINE MIR -11 197 118 318 339 110 44 chr5 14057896 14058647 -185571503 + L2 LINE L2 1935 2780 -492 686 158 24 134 chr5 14058647 14058893 -185571257 - MER20 DNA MER1_type 0 219 1 318 339 110 44 chr5 14058893 14059210 -185570940 + L2 LINE L2 2780 3075 -197 235 276 17 0 chr5 14059840 14059898 -185570252 + L2 LINE L2 3210 3268 -4 251 288 42 8 chr5 14060002 14060120 -185570030 + MLT1K LTR MaLR 138 259 -329 234 0 0 0 chr5 14110485 14110511 -185519639 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 221 318 0 0 chr5 14110561 14110624 -185519526 - MIR SINE MIR -162 100 38 230 245 128 43 chr5 14110868 14110962 -185519188 + MIR3 SINE MIR 10 111 -97 252 162 147 0 chr5 14111339 14111407 -185518743 + L1MB4 LINE L1 5284 5361 -813 2048 155 51 0 chr5 14111407 14111761 -185518389 + MSTC LTR MaLR 1 372 -56 2638 187 24 2 chr5 14111861 14112395 -185517755 + L1MB4 LINE L1 5634 6179 -1 873 222 44 0 chr5 14112816 14113019 -185517131 + MER20 DNA MER1_type 1 212 -7 1139 236 82 20 chr5 14113552 14113904 -185516246 + MLT1A2 LTR MaLR 1 374 0 530 282 0 0 chr5 14113972 14114096 -185516054 + MIR SINE MIR 97 220 -42 6274 57 37 2 chr5 14114553 14115419 -185514731 - L1PA7 LINE L1 -1 6153 5258 2210 106 25 6 chr5 14115421 14115779 -185514371 + L1PA7 LINE L1 4915 5279 -867 2333 62 3 3 chr5 14116911 14117199 -185512951 + AluY SINE Alu 1 288 -23 211 229 66 0 chr5 14117269 14117330 -185512820 - MIR SINE MIR -49 213 149 266 293 0 27 chr5 14118073 14118148 -185512002 + L2 LINE L2 3145 3217 -55 1359 259 91 77 chr5 14119460 14120110 -185510040 + L2 LINE L2 2247 2905 -409 303 28 0 0 chr5 14120430 14120466 -185509684 + (CA)n Simple_repeat Simple_repeat 2 37 0 319 248 131 27 chr5 14120467 14120866 -185509284 + L1MC5 LINE L1 4151 7513 -448 1905 157 64 6 chr5 14121184 14121528 -185508622 + THE1B LTR MaLR 1 364 0 10513 99 33 29 chr5 14121528 14123102 -185507048 + THE1B-int LTR MaLR 1 1580 0 2165 111 38 54 chr5 14123102 14123472 -185506678 + THE1B LTR MaLR 1 364 0 642 282 80 50 chr5 14123543 14124120 -185506030 + L1MC/D LINE L1 4892 5480 -802 641 215 12 0 chr5 14124221 14124384 -185505766 + GA-rich Low_complexity Low_complexity 3 167 0 2112 128 0 0 chr5 14124421 14124709 -185505441 + AluSx SINE Alu 1 288 -24 396 332 122 52 chr5 14124812 14125082 -185505068 + L2 LINE L2 2866 3155 -158 581 260 18 40 chr5 14127606 14127829 -185502321 - MER20 DNA MER1_type 0 219 2 2323 101 3 3 chr5 14127881 14128189 -185501961 - AluSp SINE Alu 0 313 6 1448 209 34 90 chr5 14128577 14129030 -185501120 + MLT1D LTR MaLR 1 421 -84 1796 188 0 0 chr5 14129030 14129317 -185500833 + AluJo SINE Alu 4 290 -22 1448 209 34 90 chr5 14129317 14129398 -185500752 + MLT1D LTR MaLR 421 505 0 186 264 75 0 chr5 14129606 14129659 -185500491 + L2 LINE L2 3201 3257 -15 1206 105 2 0 chr5 14131248 14131718 -185498432 + (CTA)n Simple_repeat Simple_repeat 1 471 0 4087 184 85 14 chr5 14131807 14133085 -185497065 - L1MA5A LINE L1 -5 6292 4939 6366 174 25 29 chr5 14133149 14133839 -185496311 - L1MA5A LINE L1 -1207 4939 4247 6918 60 8 0 chr5 14133839 14135199 -185494951 - L1PA7 LINE L1 -11 6143 4778 6366 174 25 29 chr5 14135199 14136010 -185494140 - L1MA5A LINE L1 -1899 4247 3445 4325 174 47 38 chr5 14136004 14137144 -185493006 + L1MA5A LINE L1 2296 3446 -2700 * 753 180 0 0 chr5 14137146 14137307 -185492843 - MER53 DNA DNA -28 161 1 2416 91 0 0 chr5 14137622 14137929 -185492221 - AluY SINE Alu -4 307 1 21 0 0 0 chr5 14138190 14138211 -185491939 + AT_rich Low_complexity Low_complexity 1 21 0 1956 161 70 0 chr5 14138219 14138591 -185491559 - L1MC3 LINE L1 -88 7697 7300 2172 132 0 16 chr5 14139396 14139699 -185490451 - AluSg SINE Alu -12 298 1 255 209 43 87 chr5 14141316 14141431 -185488719 - L2 LINE L2 -100 3213 3104 247 330 21 0 chr5 14141649 14141743 -185488407 - L2 LINE L2 -669 2645 2550 1117 226 80 50 chr5 14142223 14142586 -185487564 + MLT1A2 LTR MaLR 1 374 0 400 313 95 9 chr5 14146568 14147034 -185483116 + L1ME4a LINE L1 5316 5822 -299 306 264 85 0 chr5 14147133 14147239 -185482911 + L1ME4a LINE L1 6004 6118 -3 384 275 26 52 chr5 14150492 14150685 -185479465 - MIR SINE MIR -53 209 22 26 0 0 0 chr5 14151328 14151354 -185478796 + AT_rich Low_complexity Low_complexity 1 26 0 417 292 134 90 chr5 14154427 14155280 -185474870 + L1M2 LINE L1 291 1142 -5707 209 319 11 11 chr5 14155830 14155921 -185474229 + CT-rich Low_complexity Low_complexity 3 93 0 315 293 16 81 chr5 14158351 14158474 -185471676 - L2 LINE L2 0 3313 3199 236 273 0 45 chr5 14159118 14159206 -185470944 + MIR SINE MIR 172 255 -7 296 310 41 0 chr5 14160929 14161074 -185469076 + L1M2 LINE L1 3401 3551 -3297 24 53 0 0 chr5 14161206 14161244 -185468906 + AT_rich Low_complexity Low_complexity 1 38 0 2067 134 0 0 chr5 14161522 14161847 -185468303 + AluSx SINE Alu 1 325 0 1579 168 50 92 chr5 14162069 14162199 -185467951 + MLT1B LTR MaLR 1 135 -255 2456 93 3 0 chr5 14162199 14162510 -185467640 + AluSx SINE Alu 1 312 0 1579 168 50 92 chr5 14162510 14162783 -185467367 + MLT1B LTR MaLR 135 387 -3 1194 260 140 22 chr5 14163067 14164216 -185465934 + L1MDa LINE L1 1687 2982 -3558 1037 225 42 123 chr5 14164274 14164595 -185465555 + MLT1F1 LTR MaLR 69 414 -153 428 0 19 0 chr5 14164595 14164647 -185465503 + (CA)n Simple_repeat Simple_repeat 1 53 0 1037 225 42 123 chr5 14164647 14164800 -185465350 + MLT1F1 LTR MaLR 414 496 -71 2139 135 0 0 chr5 14164800 14165104 -185465046 - AluSx SINE Alu -8 304 1 1037 225 42 123 chr5 14165104 14165171 -185464979 + MLT1F1 LTR MaLR 496 567 0 30 0 0 0 chr5 14165210 14165240 -185464910 + AT_rich Low_complexity Low_complexity 1 30 0 218 56 28 0 chr5 14165320 14165356 -185464794 + (TA)n Simple_repeat Simple_repeat 1 37 0 851 283 85 34 chr5 14165360 14166032 -185464118 + L1MDa LINE L1 3873 4578 -1962 1922 194 47 33 chr5 14166040 14166530 -185463620 + MLT1D LTR MaLR 9 505 0 946 269 55 16 chr5 14166620 14167130 -185463020 + L1MDa LINE L1 4715 5244 -1296 280 260 28 66 chr5 14167178 14167359 -185462791 - Charlie2 DNA MER1_type -2610 252 79 2067 185 19 19 chr5 14168100 14168511 -185461639 + LTR57 LTR ERVL 1 411 0 397 330 144 3 chr5 14168705 14168990 -185461160 + L3 LINE CR1 560 884 -693 217 171 0 0 chr5 14170130 14170165 -185459985 - L3 LINE CR1 -978 599 565 1595 149 0 8 chr5 14170401 14170643 -185459507 + AluJo SINE Alu 64 303 -9 1740 162 23 44 chr5 14170919 14171307 -185458843 - MLT1B LTR MaLR -4 386 7 908 303 141 53 chr5 14171416 14172030 -185458120 - L2 LINE L2 0 3313 2644 1993 142 39 31 chr5 14172090 14172450 -185457700 + THE1B LTR MaLR 1 363 -1 572 115 50 86 chr5 14173632 14173771 -185456379 + MLT1B LTR MaLR 1 134 -256 712 113 75 23 chr5 14173792 14173925 -185456225 + THE1C LTR MaLR 3 142 -233 984 70 5 153 chr5 14173928 14174143 -185456007 + THE1C-int LTR MaLR 1398 1580 0 1710 150 102 40 chr5 14174143 14174496 -185455654 + THE1C LTR MaLR 1 375 0 1170 134 101 0 chr5 14174498 14174715 -185455435 + MLT1B LTR MaLR 152 390 0 327 25 0 0 chr5 14174724 14174764 -185455386 + (TG)n Simple_repeat Simple_repeat 2 41 0 207 0 0 0 chr5 14174924 14174947 -185455203 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 243 270 26 115 chr5 14175495 14175534 -185454616 - L1M4 LINE L1 -1851 4295 4254 2313 97 0 0 chr5 14175534 14175832 -185454318 + AluSx SINE Alu 1 298 -14 243 270 26 115 chr5 14175832 14176016 -185454134 - L1M4 LINE L1 -1892 4254 4090 246 206 68 0 chr5 14177328 14177401 -185452749 + L1ME1 LINE L1 6089 6166 0 350 140 0 0 chr5 14177541 14177591 -185452559 + LTR29 LTR ERV1 3 52 -570 22 0 0 0 chr5 14178338 14178360 -185451790 + AT_rich Low_complexity Low_complexity 1 22 0 734 299 83 64 chr5 14178695 14179171 -185450979 - MLT1G1 LTR MaLR -4 591 101 2468 129 11 5 chr5 14179171 14179544 -185450606 + THE1C LTR MaLR 1 375 0 734 299 83 64 chr5 14179544 14179632 -185450518 - MLT1G1 LTR MaLR -494 101 16 316 350 10 0 chr5 14179650 14179753 -185450397 - MIR SINE MIR -6 256 153 252 367 114 6 chr5 14180144 14180302 -185449848 - MIR3 SINE MIR -10 198 24 23 33 0 0 chr5 14181004 14181034 -185449116 + AT_rich Low_complexity Low_complexity 1 30 0 261 189 38 0 chr5 14181403 14181456 -185448694 + MLT1B LTR MaLR 1 55 -335 246 128 0 0 chr5 14182106 14182145 -185448005 + (A)n Simple_repeat Simple_repeat 1 39 0 1068 218 29 124 chr5 14182148 14182534 -185447616 + MLT1B LTR MaLR 42 390 0 837 335 30 46 chr5 14182792 14183252 -185446898 + L1MB1 LINE L1 173 625 -5688 605 79 0 11 chr5 14183379 14183468 -185446682 + (GAAA)n Simple_repeat Simple_repeat 1 88 0 2705 240 42 32 chr5 14183511 14184722 -185445428 + L1MB1 LINE L1 795 1895 -4489 10924 214 44 30 chr5 14184855 14185247 -185444903 + L1MB1 LINE L1 2170 2555 -3849 2184 176 28 30 chr5 14185247 14185674 -185444476 - MSTB LTR MaLR 0 426 1 10924 214 44 30 chr5 14185674 14185783 -185444367 + L1MB1 LINE L1 2555 2661 -3743 245 75 25 0 chr5 14185783 14185823 -185444327 + (TA)n Simple_repeat Simple_repeat 1 41 0 10924 214 44 30 chr5 14185823 14185983 -185444167 + L1MB1 LINE L1 2661 2817 -3587 1712 203 25 11 chr5 14185983 14186343 -185443807 - MLT1A1 LTR MaLR 0 365 1 10924 214 44 30 chr5 14186343 14186588 -185443562 + L1MB1 LINE L1 2817 3057 -3347 4123 162 25 6 chr5 14186588 14187296 -185442854 + MER72 LTR ERV1 1 722 0 10924 214 44 30 chr5 14187296 14187847 -185442303 + L1MB1 LINE L1 3057 3598 -2806 1377 255 28 6 chr5 14187847 14188204 -185441946 - MLT1A1 LTR MaLR 0 365 1 10924 214 44 30 chr5 14188204 14189012 -185441138 + L1MB1 LINE L1 3598 4393 -2011 386 52 0 17 chr5 14189012 14189070 -185441080 + (CA)n Simple_repeat Simple_repeat 2 58 0 10924 214 44 30 chr5 14189070 14189234 -185440916 + L1MB1 LINE L1 4393 4553 -1851 1832 219 14 0 chr5 14189234 14189591 -185440559 - MLT1A1 LTR MaLR 0 365 4 10924 214 44 30 chr5 14189591 14191078 -185439072 + L1MB1 LINE L1 4553 6155 -249 2147 281 79 27 chr5 14191187 14193298 -185436852 + L1ME1 LINE L1 1598 3775 -2440 971 270 22 32 chr5 14193317 14193394 -185436756 + L1PA13 LINE L1 1 77 -6710 2059 124 47 47 chr5 14193394 14193564 -185436586 + THE1B LTR MaLR 1 170 -194 2207 117 0 0 chr5 14193564 14193871 -185436279 + AluSq SINE Alu 1 307 -6 2059 124 47 47 chr5 14193871 14194064 -185436086 + THE1B LTR MaLR 169 364 0 11144 103 13 4 chr5 14194064 14195629 -185434521 + THE1B-int LTR MaLR 1 1580 0 2057 133 48 23 chr5 14195629 14195983 -185434167 + THE1B LTR MaLR 1 363 -1 971 270 22 32 chr5 14195983 14196181 -185433969 + L1PA13 LINE L1 74 275 -6512 2351 231 58 62 chr5 14196182 14196703 -185433447 + L1ME1 LINE L1 4376 4897 -1338 2465 57 3 0 chr5 14196703 14196999 -185433151 + AluY SINE Alu 2 298 -13 2351 231 58 62 chr5 14196999 14197318 -185432832 + L1ME1 LINE L1 4897 5216 -1019 2338 92 3 3 chr5 14197318 14197624 -185432526 + AluY SINE Alu 1 306 -5 2351 231 58 62 chr5 14197624 14197975 -185432175 + L1ME1 LINE L1 5216 5567 -668 2026 164 0 0 chr5 14197975 14198287 -185431863 + AluJb SINE Alu 1 312 0 2351 231 58 62 chr5 14198287 14198839 -185431311 + L1ME1 LINE L1 5567 6110 -125 2225 116 0 0 chr5 14198839 14199140 -185431010 - AluSx SINE Alu -11 301 1 2351 231 58 62 chr5 14199140 14199257 -185430893 + L1ME1 LINE L1 6110 6226 -9 701 137 41 14 chr5 14199743 14199889 -185430261 + L1MA8 LINE L1 6140 6289 -2 1609 182 11 0 chr5 14200175 14200439 -185429711 + AluJb SINE Alu 1 267 -45 2488 253 24 33 chr5 14200497 14201440 -185428710 - L1M4 LINE L1 -2368 3778 2844 210 372 28 28 chr5 14202362 14202507 -185427643 + MIR3 SINE MIR 58 202 -6 209 56 0 28 chr5 14202988 14203024 -185427126 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 564 250 18 0 chr5 14204039 14204207 -185425943 + MER104 DNA Tc2 5 175 -5 383 282 130 60 chr5 14204703 14205072 -185425078 - MLT1G LTR MaLR -6 584 190 354 100 0 0 chr5 14205074 14205134 -185425016 + (GA)n Simple_repeat Simple_repeat 2 61 0 190 366 24 0 chr5 14206299 14206381 -185423769 - MIR SINE MIR -28 234 151 388 295 9 9 chr5 14207013 14207125 -185423025 + MIR3 SINE MIR 90 201 -7 194 290 73 73 chr5 14207278 14207402 -185422748 + L3 LINE CR1 371 494 -1083 182 303 79 46 chr5 14207584 14207736 -185422414 + L3 LINE CR1 735 891 -686 2305 93 0 0 chr5 14207764 14208066 -185422084 + AluY SINE Alu 1 302 -9 704 181 44 0 chr5 14208066 14208248 -185421902 + Charlie5 DNA MER1_type 2435 2624 0 212 365 67 10 chr5 14208252 14208356 -185421794 + L3 LINE CR1 1219 1328 -249 396 103 0 0 chr5 14209694 14209752 -185420398 + (CA)n Simple_repeat Simple_repeat 2 59 0 196 253 0 133 chr5 14210534 14210617 -185419533 + L2 LINE L2 3198 3269 -44 979 184 102 105 chr5 14210667 14211058 -185419092 + MLT1B LTR MaLR 1 390 0 249 322 41 25 chr5 14211256 14211377 -185418773 + L2 LINE L2 3191 3313 0 5314 165 29 11 chr5 14211886 14212637 -185417513 + L1MA6 LINE L1 4924 5712 -588 261 0 0 0 chr5 14212637 14212666 -185417484 + (TA)n Simple_repeat Simple_repeat 1 29 0 5314 165 29 11 chr5 14212666 14213262 -185416888 + L1MA6 LINE L1 5712 6296 -4 24 0 0 0 chr5 14213491 14213515 -185416635 + AT_rich Low_complexity Low_complexity 1 24 0 29 60 0 0 chr5 14213858 14213908 -185416242 + AT_rich Low_complexity Low_complexity 1 50 0 492 336 86 12 chr5 14214266 14214510 -185415640 + MLT1K LTR MaLR 155 416 -172 2120 130 45 28 chr5 14214513 14214866 -185415284 - THE1B LTR MaLR 0 364 6 772 52 0 0 chr5 14215477 14215574 -185414576 + L1PA7 LINE L1 6052 6148 -6 23 33 0 0 chr5 14215577 14215607 -185414543 + AT_rich Low_complexity Low_complexity 1 30 0 2000 208 18 0 chr5 14216328 14216727 -185413423 + MLT2C2 LTR ERVL 1 406 -58 192 158 0 0 chr5 14216750 14216788 -185413362 + (TG)n Simple_repeat Simple_repeat 2 39 0 2080 273 111 36 chr5 14218625 14219879 -185410271 + L2 LINE L2 1835 3189 -124 260 179 0 0 chr5 14219879 14219935 -185410215 - MLT2C2 LTR ERVL -408 56 1 342 265 31 10 chr5 14219994 14220092 -185410058 + L2 LINE L2 3214 3313 0 283 325 67 8 chr5 14220202 14220322 -185409828 + MIR SINE MIR 23 149 -113 310 312 172 13 chr5 14220735 14220892 -185409258 + MIR SINE MIR 14 195 -67 540 267 56 11 chr5 14221181 14221361 -185408789 + MER5A DNA MER1_type 2 189 0 211 280 32 89 chr5 14221551 14221708 -185408442 - L2 LINE L2 -13 3300 3153 24 53 0 0 chr5 14222393 14222431 -185407719 + AT_rich Low_complexity Low_complexity 1 38 0 281 266 34 110 chr5 14222699 14222936 -185407214 - L2 LINE L2 -261 3052 2834 2434 193 53 12 chr5 14224851 14225364 -185404786 - MER44D DNA MER2_type -16 589 1 1288 202 73 48 chr5 14225999 14226356 -185403794 + MLT1A2 LTR MaLR 5 370 -4 356 235 18 15 chr5 14226750 14226913 -185403237 + GA-rich Low_complexity Low_complexity 3 273 0 26 30 0 0 chr5 14227365 14227398 -185402752 + AT_rich Low_complexity Low_complexity 1 33 0 419 297 114 20 chr5 14227788 14227990 -185402160 - L1M4 LINE L1 -3025 3121 2901 228 67 0 0 chr5 14228270 14228300 -185401850 + (CAT)n Simple_repeat Simple_repeat 1 30 0 1314 304 95 13 chr5 14229989 14230692 -185399458 + MER69B DNA AcHobo 114 874 -352 595 199 121 48 chr5 14230692 14230858 -185399292 + MER20 DNA MER1_type 2 179 -40 1188 8 0 0 chr5 14230858 14230991 -185399159 + AluYb8 SINE Alu 184 316 -2 303 100 0 0 chr5 14230991 14231031 -185399119 + MER20 DNA MER1_type 172 211 -8 818 213 158 26 chr5 14231036 14231346 -185398804 + MER69B DNA AcHobo 863 1213 -13 712 261 132 69 chr5 14231384 14231863 -185398287 - MLT1H LTR MaLR 0 549 41 245 206 29 0 chr5 14231935 14232003 -185398147 - L1MEd LINE L1 -4992 1127 1058 1565 137 391 44 chr5 14232003 14232433 -185397717 - LTR18B LTR ERVL -13 601 23 612 294 64 47 chr5 14232449 14232915 -185397235 - L1MEd LINE L1 -5074 1045 572 2241 130 28 0 chr5 14233114 14233468 -185396682 - THE1B LTR MaLR 0 364 1 344 276 135 21 chr5 14233531 14233723 -185396427 - L1MEd LINE L1 -5904 215 2 25 0 0 0 chr5 14234360 14234385 -185395765 + AT_rich Low_complexity Low_complexity 1 25 0 1394 175 56 28 chr5 14234723 14235009 -185395141 - AluJo SINE Alu -8 294 1 195 69 0 0 chr5 14236034 14236063 -185394087 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 267 305 136 0 chr5 14236070 14236188 -185393962 - L2 LINE L2 0 3313 3180 598 298 41 25 chr5 14236221 14236537 -185393613 - L1MC/D LINE L1 -2162 5646 5326 1723 223 113 18 chr5 14236555 14237121 -185393029 - L1MC4a LINE L1 -114 7694 7075 285 361 19 7 chr5 14238151 14238306 -185391844 + MLT1I LTR MaLR 253 409 0 339 235 12 0 chr5 14238324 14238409 -185391741 - L1P5 LINE L1 -471 5680 5595 477 264 8 0 chr5 14238550 14238675 -185391475 - Charlie1 DNA MER1_type -7 2754 2629 185 208 42 10 chr5 14238815 14238911 -185391239 + (TA)n Simple_repeat Simple_repeat 1 99 0 1330 210 162 125 chr5 14239067 14239653 -185390497 - MLT1E2 LTR MaLR -4 622 43 503 230 37 15 chr5 14239711 14239846 -185390304 + MLT1E LTR MaLR 1 138 -455 24 32 0 0 chr5 14241632 14241663 -185388487 + AT_rich Low_complexity Low_complexity 1 31 0 900 294 49 53 chr5 14243487 14243980 -185386170 + MLT1J LTR MaLR 21 511 0 2550 190 141 136 chr5 14244682 14245244 -185384906 + L1MD3 LINE L1 6720 7277 -718 502 220 17 8 chr5 14245244 14245362 -185384788 + MLT1F1 LTR MaLR 1 119 -448 2550 190 141 136 chr5 14245362 14245944 -185384206 + L1MD3 LINE L1 7277 7988 -7 193 93 0 47 chr5 14247237 14247280 -185382870 + (TA)n Simple_repeat Simple_repeat 2 42 0 202 143 16 48 chr5 14247417 14247480 -185382670 + (TA)n Simple_repeat Simple_repeat 1 61 0 242 179 0 75 chr5 14249661 14249728 -185380422 + GA-rich Low_complexity Low_complexity 3 64 0 22 0 0 0 chr5 14250880 14250902 -185379248 + AT_rich Low_complexity Low_complexity 1 22 0 364 62 10 0 chr5 14251501 14251553 -185378597 - Alu SINE Alu -7 293 249 4116 223 15 25 chr5 14251554 14252541 -185377609 - L1P5 LINE L1 -822 5324 4347 6826 59 14 1 chr5 14252541 14253711 -185376439 + L1PA7 LINE L1 4952 6139 -15 4116 223 15 25 chr5 14253711 14253811 -185376339 - L1P5 LINE L1 -1799 4347 4248 669 158 0 0 chr5 14253832 14253946 -185376204 - L1MA2 LINE L1 0 6304 6191 2873 105 20 11 chr5 14254047 14254496 -185375654 - L1MA2 LINE L1 -48 6256 5804 2024 219 26 0 chr5 14254482 14254934 -185375216 - L1 LINE L1 -1886 4260 3797 * 5227 125 11 16 chr5 14254927 14255751 -185374399 + L1PA16 LINE L1 5342 6161 -5 2047 110 33 0 chr5 14255899 14256200 -185373950 + AluSq SINE Alu 1 311 -2 26 0 0 0 chr5 14257000 14257026 -185373124 + AT_rich Low_complexity Low_complexity 1 26 0 386 238 24 0 chr5 14257078 14257162 -185372988 - MER5A DNA MER1_type -77 112 27 995 213 51 121 chr5 14257220 14257485 -185372665 - Charlie4a DNA MER1_type -1453 508 289 1549 123 111 0 chr5 14257485 14257728 -185372422 + AluSx SINE Alu 6 275 -37 995 213 51 121 chr5 14257728 14257932 -185372218 - Charlie4a DNA MER1_type -1672 289 72 28 61 0 0 chr5 14258116 14258165 -185371985 + AT_rich Low_complexity Low_complexity 1 49 0 2211 117 0 0 chr5 14258283 14258581 -185371569 + AluSg SINE Alu 1 298 -12 198 348 130 0 chr5 14258787 14258879 -185371271 - MIR SINE MIR -112 150 47 234 333 20 0 chr5 14259539 14259638 -185370512 + HAL1 LINE L1 1501 1601 -906 1779 176 22 25 chr5 14259917 14260274 -185369876 - MLT1A1 LTR MaLR -6 359 4 264 247 35 0 chr5 14260275 14260360 -185369790 + HAL1b LINE L1 704 791 -557 191 219 47 31 chr5 14260390 14260454 -185369696 - MIR SINE MIR -7 255 191 378 298 144 49 chr5 14260454 14260803 -185369347 + HAL1b LINE L1 784 1193 -155 474 120 0 0 chr5 14260803 14260878 -185369272 + (TA)n Simple_repeat Simple_repeat 1 75 0 378 298 144 49 chr5 14260878 14261014 -185369136 + HAL1b LINE L1 1193 1315 -33 2514 184 80 11 chr5 14262644 14262672 -185367478 - L1MC1 LINE L1 -193 6140 6115 618 191 0 8 chr5 14262672 14262803 -185367347 - L1MB7 LINE L1 0 6184 6055 2514 184 80 11 chr5 14262803 14263327 -185366823 - L1MC1 LINE L1 -218 6115 5550 226 247 45 11 chr5 14263337 14263426 -185366724 - L1MC1 LINE L1 -1759 4387 4296 240 35 0 0 chr5 14264199 14264228 -185365922 + (CA)n Simple_repeat Simple_repeat 1 29 0 2177 161 57 43 chr5 14264297 14264433 -185365717 + L1MB8 LINE L1 5637 5770 -408 3136 133 36 82 chr5 14264433 14264781 -185365369 + MER7C DNA MER2_type 2 310 -2718 2104 125 6 3 chr5 14264781 14265092 -185365058 - AluSx SINE Alu 0 312 1 3136 133 36 82 chr5 14265092 14265373 -185364777 + MER7C DNA MER2_type 310 602 0 2177 161 57 43 chr5 14265373 14265765 -185364385 + L1MB8 LINE L1 5770 6172 -6 1774 196 32 50 chr5 14265839 14266278 -185363872 + MSTB2 LTR MaLR 15 445 -12 281 296 123 37 chr5 14266933 14267095 -185363055 - MIR3 SINE MIR -5 203 28 360 292 31 84 chr5 14267342 14267568 -185362582 + MIR SINE MIR 43 256 -6 185 136 0 23 chr5 14267582 14267626 -185362524 + (CAT)n Simple_repeat Simple_repeat 2 44 0 24 0 0 0 chr5 14268297 14268321 -185361829 + AT_rich Low_complexity Low_complexity 1 24 0 226 330 0 75 chr5 14268724 14268830 -185361320 - MIR3 SINE MIR -47 161 64 366 250 167 15 chr5 14269351 14269483 -185360667 + MIR SINE MIR 17 168 -94 325 305 193 27 chr5 14269517 14269530 -185360620 + LTR16B LTR ERVL 12 22 -442 1796 190 26 26 chr5 14269530 14269920 -185360230 - MLT1B LTR MaLR 0 390 1 325 305 193 27 chr5 14269920 14270165 -185359985 + LTR16B LTR ERVL 22 313 -151 507 113 0 0 chr5 14270165 14270245 -185359905 + (TTCC)n Simple_repeat Simple_repeat 2 81 0 955 253 15 23 chr5 14270249 14270514 -185359636 + MER89-int LTR ERV1 4418 4680 -2121 2161 285 74 40 chr5 14270537 14271482 -185358668 - MER89-int LTR ERV1 -2379 4422 3446 2319 255 88 55 chr5 14271506 14272460 -185357690 - MER89-int LTR ERV1 -3473 3328 213 2391 251 73 24 chr5 14272625 14273379 -185356771 - MER89-int LTR ERV1 -4270 2531 1741 1279 284 99 63 chr5 14273429 14273625 -185356525 - MER89-int LTR ERV1 -6080 721 534 261 0 0 0 chr5 14273625 14273654 -185356496 + (CAAAA)n Simple_repeat Simple_repeat 4 32 0 1279 284 99 63 chr5 14273654 14273983 -185356167 - MER89-int LTR ERV1 -6267 534 218 2001 134 137 13 chr5 14273983 14274364 -185355786 - MSTA LTR MaLR 0 428 1 1279 284 99 63 chr5 14274364 14274419 -185355731 - MER89-int LTR ERV1 -6583 218 166 1951 143 53 34 chr5 14274419 14274776 -185355374 + THE1B LTR MaLR 1 364 0 1279 284 99 63 chr5 14274776 14274889 -185355261 - MER89-int LTR ERV1 -6635 166 1 1811 224 0 38 chr5 14274891 14275367 -185354783 - MER89 LTR ERV1 -2 557 2 196 332 128 33 chr5 14276014 14276225 -185353925 + L2 LINE L2 2514 2744 -570 25 95 0 0 chr5 14276448 14276522 -185353628 + AT_rich Low_complexity Low_complexity 1 74 0 206 320 0 0 chr5 14279501 14279551 -185350599 + MIR SINE MIR 97 146 -62 1121 67 0 0 chr5 14279717 14279851 -185350299 + AluSg/x SINE Alu 156 289 -23 29 0 0 0 chr5 14282220 14282249 -185347901 + AT_rich Low_complexity Low_complexity 1 29 0 35 24 0 0 chr5 14282432 14282474 -185347676 + AT_rich Low_complexity Low_complexity 1 42 0 2087 99 3 13 chr5 14283727 14284030 -185346120 + AluSc SINE Alu 1 300 -9 23 0 0 0 chr5 14284366 14284389 -185345761 + AT_rich Low_complexity Low_complexity 1 23 0 222 91 0 0 chr5 14284907 14284940 -185345210 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1969 127 3 0 chr5 14284944 14285227 -185344923 - AluY SINE Alu -27 284 1 493 298 72 44 chr5 14285543 14285932 -185344218 - L1M4 LINE L1 -2055 4091 3692 1517 161 14 3 chr5 14286033 14286324 -185343826 - L1MA9 LINE L1 -2 6310 6017 415 342 45 23 chr5 14286324 14286634 -185343516 - L1M4 LINE L1 -2938 3208 2892 22 35 0 0 chr5 14286975 14287004 -185343146 + AT_rich Low_complexity Low_complexity 1 29 0 291 140 0 0 chr5 14287291 14287341 -185342809 + (TG)n Simple_repeat Simple_repeat 1 50 0 2374 65 0 3 chr5 14287565 14287873 -185342277 - AluY SINE Alu -4 307 1 21 0 0 0 chr5 14288649 14288670 -185341480 + AT_rich Low_complexity Low_complexity 1 21 0 409 330 90 29 chr5 14289497 14289809 -185340341 - L1ME3A LINE L1 -312 5927 5597 299 291 56 42 chr5 14289838 14290051 -185340099 - L1ME3A LINE L1 -600 5631 5416 1394 128 179 0 chr5 14290105 14290362 -185339788 - AluJb SINE Alu -9 303 1 324 82 49 16 chr5 14290494 14290555 -185339595 - L1PA13 LINE L1 0 6163 6101 4558 92 0 3 chr5 14290556 14291178 -185338972 - L1PA13 LINE L1 -35 6128 5509 478 310 98 40 chr5 14291315 14291786 -185338364 - L1ME3A LINE L1 -1567 4648 4151 652 227 0 0 chr5 14291835 14291967 -185338183 - FLAM_A SINE Alu -1 132 1 192 152 0 0 chr5 14292013 14292046 -185338104 + (TA)n Simple_repeat Simple_repeat 2 34 0 274 276 23 0 chr5 14292049 14292136 -185338014 - L1MC4 LINE L1 -1339 6703 6615 245 318 0 0 chr5 14292096 14292184 -185337966 + L1MC4 LINE L1 6615 6702 -1340 * 280 309 90 9 chr5 14292301 14292535 -185337615 - HAL1b LINE L1 -815 602 441 1711 224 6 8 chr5 14292614 14292980 -185337170 + MLT1A1 LTR MaLR 1 365 0 724 150 0 0 chr5 14292982 14293102 -185337048 + MLT1A1-int LTR MaLR 2 121 -1614 716 199 68 12 chr5 14343102 14343263 -185286887 - MLT1D LTR MaLR -335 170 1 1344 170 156 22 chr5 14344167 14344486 -185285664 + MLT2D LTR ERVL 1 376 -38 906 29 36 7 chr5 14344486 14344625 -185285525 + (TCTA)n Simple_repeat Simple_repeat 2 144 0 1344 170 156 22 chr5 14344625 14344670 -185285480 + MLT2D LTR ERVL 376 414 0 423 308 56 69 chr5 14344990 14345367 -185284783 + LTR16C LTR ERVL 117 488 -3 546 207 0 25 chr5 14345503 14345624 -185284526 + L1MD2 LINE L1 6013 6130 -229 270 81 0 0 chr5 14345628 14345665 -185284485 + (CA)n Simple_repeat Simple_repeat 2 38 0 566 212 68 0 chr5 14345673 14345819 -185284331 + L1MD2 LINE L1 6182 6337 -22 223 299 15 0 chr5 14347045 14347112 -185283038 - MIR3 SINE MIR -22 186 119 6512 151 43 13 chr5 14347971 14349166 -185280984 + Tigger3b DNA MER2_type 1 1231 0 333 0 0 0 chr5 14349409 14349446 -185280704 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1718 114 38 0 chr5 14349449 14349711 -185280439 - L1PA10 LINE L1 -20 6148 5877 * 2056 68 0 0 chr5 14349707 14349972 -185280178 + L1PA10 LINE L1 5617 5881 -287 22 0 0 0 chr5 14350248 14350270 -185279880 + AT_rich Low_complexity Low_complexity 1 22 0 13427 138 12 16 chr5 14350835 14353052 -185277098 + L1P LINE L1 11 2219 -3927 1541 115 5 9 chr5 14353052 14353297 -185276853 + AluSg/x SINE Alu 66 309 0 309 133 0 0 chr5 14353297 14353342 -185276808 + L1MC1 LINE L1 5593 5637 -2171 1538 154 0 8 chr5 14353389 14353642 -185276508 + L1MC1 LINE L1 6069 6319 -14 12042 68 11 0 chr5 14354344 14356442 -185273708 + L1PA6 LINE L1 3734 5856 -298 2861 38 8 16 chr5 14356442 14356808 -185273342 + L1PA6 LINE L1 5787 6149 -5 261 348 89 19 chr5 14356977 14357236 -185272914 + L1PA15 LINE L1 4 280 -7301 16609 209 18 19 chr5 14358239 14363505 -185266645 + L1PA15 LINE L1 2319 7588 -15 51 65 0 0 chr5 14363535 14363628 -185266522 + AT_rich Low_complexity Low_complexity 1 93 0 28 0 0 0 chr5 14363666 14363694 -185266456 + AT_rich Low_complexity Low_complexity 1 28 0 356 290 161 51 chr5 14363769 14363986 -185266164 - MLT1H LTR MaLR 0 549 309 231 252 237 37 chr5 14364051 14364186 -185265964 - MLT1H LTR MaLR -387 162 1 25 0 0 0 chr5 14364285 14364310 -185265840 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 14364923 14364954 -185265196 + AT_rich Low_complexity Low_complexity 1 31 0 24 53 0 0 chr5 14367252 14367290 -185262860 + AT_rich Low_complexity Low_complexity 1 38 0 195 42 0 0 chr5 14367642 14367666 -185262484 + (TA)n Simple_repeat Simple_repeat 2 25 0 627 326 72 14 chr5 14368825 14369267 -185260883 + L1MEd LINE L1 730 1197 -5219 2428 130 5 16 chr5 14369277 14369645 -185260505 + THE1B LTR MaLR 1 364 0 25 65 0 0 chr5 14369690 14369736 -185260414 + AT_rich Low_complexity Low_complexity 1 46 0 251 232 107 54 chr5 14370131 14370243 -185259907 + L1MEd LINE L1 1592 1859 -4567 21 0 0 0 chr5 14370926 14370947 -185259203 + AT_rich Low_complexity Low_complexity 1 21 0 1614 173 29 45 chr5 14371591 14371920 -185258230 - L1MA9 LINE L1 0 6312 5988 1589 165 210 11 chr5 14371920 14372277 -185257873 - MSTA LTR MaLR 0 428 1 1614 173 29 45 chr5 14372277 14372329 -185257821 - L1MA9 LINE L1 -324 5988 5937 1901 150 48 3 chr5 14372348 14372682 -185257468 - L1PB4 LINE L1 -38 6118 5770 804 220 12 3 chr5 14372690 14373005 -185257145 + CT-rich Low_complexity Low_complexity 1 317 0 282 70 0 53 chr5 14373031 14373088 -185257062 + (TCC)n Simple_repeat Simple_repeat 3 56 0 749 242 6 17 chr5 14373090 14373268 -185256882 - FRAM SINE Alu 0 176 1 1855 178 14 6 chr5 14373273 14373621 -185256529 - L1PB4 LINE L1 -374 5782 5432 1974 188 22 18 chr5 14373720 14374168 -185255982 - L1PB4 LINE L1 -1333 4813 4364 2640 168 21 6 chr5 14374168 14374685 -185255465 - L1MA2 LINE L1 -6 6298 5774 1363 134 4 34 chr5 14374685 14375056 -185255094 - L1MA2 LINE L1 -743 5403 5117 240 305 12 0 chr5 14375055 14375137 -185255013 - L1PB4 LINE L1 -3432 2714 2632 * 4578 194 25 6 chr5 14375136 14376123 -185254027 - L1MA2 LINE L1 -1759 4387 3382 2556 59 0 0 chr5 14376597 14376903 -185253247 - AluY SINE Alu -5 306 1 1651 116 17 0 chr5 14377020 14377261 -185252889 + MER47A DNA MER2_type 22 266 -100 1567 132 0 60 chr5 14377356 14377637 -185252513 + L1P LINE L1 3362 3625 -2521 28 0 0 0 chr5 14377686 14377714 -185252436 + AT_rich Low_complexity Low_complexity 1 28 0 595 307 18 12 chr5 14378226 14378392 -185251758 + LTR16C LTR ERVL 68 234 -257 30243 114 11 22 chr5 14378394 14384817 -185245333 + L1PA7 LINE L1 16 6461 -8 685 248 57 1 chr5 14385637 14385942 -185244208 + MLT1A2 LTR MaLR 7 370 -4 2233 219 68 3 chr5 14385946 14386583 -185243567 + MLT1A2-int LTR MaLR 1 889 -482 230 344 0 16 chr5 14386713 14386774 -185243376 + MLT1A2-int LTR MaLR 1260 1319 -416 * 1948 235 65 5 chr5 14386770 14387217 -185242933 + MLT1A2-int LTR MaLR 1262 1735 0 1352 228 94 12 chr5 14387217 14387559 -185242591 + MLT1A2 LTR MaLR 1 370 -4 5410 159 108 8 chr5 14390060 14391107 -185239043 + Tigger1 DNA MER2_type 1 1152 -1266 376 378 22 16 chr5 14391110 14391295 -185238855 - L2 LINE L2 -299 3014 2829 2226 98 0 22 chr5 14391401 14391744 -185238406 + AluSc SINE Alu 1 336 0 24 32 0 0 chr5 14391975 14392006 -185238144 + AT_rich Low_complexity Low_complexity 1 31 0 205 86 0 29 chr5 14392314 14392349 -185237801 + (TAAAG)n Simple_repeat Simple_repeat 2 35 0 670 298 39 21 chr5 14392510 14392898 -185237252 + L1 LINE L1 3587 3985 -2161 271 301 124 26 chr5 14392996 14393222 -185236928 - L2 LINE L2 -453 2861 2614 2219 157 14 0 chr5 14393560 14393975 -185236175 - L1P LINE L1 -2771 3375 2955 5069 102 7 0 chr5 14393992 14394711 -185235439 + L1PA10 LINE L1 5440 6163 -5 36 23 0 0 chr5 14394712 14394755 -185235395 + AT_rich Low_complexity Low_complexity 1 43 0 225 287 43 85 chr5 14395537 14395725 -185234425 - MIR3 SINE MIR -28 180 1 1501 173 3 48 chr5 14396125 14396262 -185233888 + AluJo SINE Alu 7 126 -186 192 97 0 0 chr5 14396262 14396293 -185233857 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1501 173 3 48 chr5 14396293 14396444 -185233706 + AluJo SINE Alu 126 282 -30 27 0 0 0 chr5 14396445 14396472 -185233678 + AT_rich Low_complexity Low_complexity 1 27 0 263 349 37 9 chr5 14396539 14396648 -185233502 - MIR SINE MIR -121 141 30 2315 81 0 3 chr5 14396723 14397020 -185233130 - AluY SINE Alu -15 296 1 181 339 142 47 chr5 14398054 14398181 -185231969 + L2 LINE L2 3134 3272 0 1863 156 148 8 chr5 14398604 14398975 -185231175 + MSTA LTR MaLR 6 428 0 452 222 0 9 chr5 14399194 14399302 -185230848 - FLAM_C SINE Alu -36 107 1 261 374 106 11 chr5 14399444 14399623 -185230527 - L2 LINE L2 -4 3268 3073 197 159 23 0 chr5 14400453 14400497 -185229653 + GA-rich Low_complexity Low_complexity 3 47 0 810 270 64 64 chr5 14403080 14403170 -185226980 - MLT1E LTR MaLR 0 593 504 929 193 6 11 chr5 14403170 14403346 -185226804 + FAM SINE Alu 1 175 0 810 270 64 64 chr5 14403346 14403792 -185226358 - MLT1E LTR MaLR -89 504 3 41 58 0 0 chr5 14405143 14405212 -185224938 + AT_rich Low_complexity Low_complexity 1 69 0 21 71 0 0 chr5 14405550 14405592 -185224558 + AT_rich Low_complexity Low_complexity 1 42 0 970 283 77 74 chr5 14408981 14409603 -185220547 + L1ME LINE L1 1 624 -5446 653 194 252 34 chr5 14409611 14409905 -185220245 - LTR37A LTR ERV1 -8 418 61 2766 143 5 5 chr5 14409918 14410346 -185219804 - MSTA LTR MaLR 0 428 1 1747 118 20 0 chr5 14410402 14410657 -185219493 - AluSq SINE Alu -53 260 1 1978 258 21 2 chr5 14410664 14411179 -185218971 + L1ME1 LINE L1 5584 6108 -58 1272 184 30 110 chr5 14411185 14411553 -185218597 + MLT1A1 LTR MaLR 1 420 -37 2693 7 0 0 chr5 14411553 14411848 -185218302 - AluYa5 SINE Alu 0 311 17 1272 184 30 110 chr5 14411848 14411880 -185218270 + MLT1A1 LTR MaLR 420 453 -4 332 155 0 17 chr5 14411887 14411945 -185218205 + MLT1A1-int LTR MaLR 5 61 -1310 269 77 0 0 chr5 14411945 14411984 -185218166 + MLT2A1 LTR ERVL 1 39 -405 511 269 22 0 chr5 14412640 14412774 -185217376 + MLT1D LTR MaLR 287 423 -82 1660 233 81 11 chr5 14412793 14413261 -185216889 - MLT1D LTR MaLR -2 503 3 199 338 0 0 chr5 14413271 14413342 -185216808 - L2 LINE L2 -48 3224 3154 497 305 81 29 chr5 14414577 14414755 -185215395 - L1MC4 LINE L1 -136 7906 7739 2331 69 0 13 chr5 14414755 14415061 -185215089 - AluY SINE Alu -9 302 1 497 305 81 29 chr5 14415061 14415226 -185214924 - L1MC4 LINE L1 -303 7739 7545 1507 281 112 20 chr5 14415274 14416377 -185213773 - L1MC4 LINE L1 -636 7406 6097 262 320 10 0 chr5 14416430 14416530 -185213620 - L1M4 LINE L1 -1170 4976 4876 203 179 0 0 chr5 14416689 14416728 -185213422 + (TA)n Simple_repeat Simple_repeat 1 39 0 896 317 48 8 chr5 14418091 14418447 -185211703 - LTR16A LTR ERVL -5 445 76 2583 155 9 16 chr5 14419258 14419685 -185210465 - MSTC LTR MaLR 0 428 5 22 0 0 0 chr5 14420045 14420067 -185210083 + AT_rich Low_complexity Low_complexity 1 22 0 26 64 0 0 chr5 14420327 14420374 -185209776 + AT_rich Low_complexity Low_complexity 1 47 0 1515 180 21 28 chr5 14420523 14420806 -185209344 + AluJb SINE Alu 1 281 -31 182 138 0 0 chr5 14422481 14422510 -185207640 + MER5B DNA MER1_type 21 49 -129 318 26 0 0 chr5 14422540 14422579 -185207571 + (TTTTA)n Simple_repeat Simple_repeat 4 42 0 5263 2 0 0 chr5 14422579 14423161 -185206989 - L1HS LINE L1 -16 6139 5558 464 297 16 23 chr5 14423171 14423299 -185206851 - MER5A DNA MER1_type -54 135 9 908 349 44 14 chr5 14423498 14423865 -185206285 + L2 LINE L2 142 519 -2795 211 315 98 0 chr5 14424294 14424386 -185205764 + L2 LINE L2 3213 3313 0 34 0 0 0 chr5 14424506 14424540 -185205610 + AT_rich Low_complexity Low_complexity 1 34 0 2229 47 0 106 chr5 14425595 14425934 -185204216 + AluY SINE Alu 1 303 -8 2170 173 57 40 chr5 14425959 14426415 -185203735 - MLT2C2 LTR ERVL 0 464 1 387 269 19 0 chr5 14426707 14426815 -185203335 - MLT1L LTR MaLR -364 251 142 418 392 76 3 chr5 14426986 14427274 -185202876 + L2 LINE L2 2291 2599 -715 226 217 0 0 chr5 14427322 14427391 -185202759 + L1MC4 LINE L1 6635 6703 -1339 195 129 0 0 chr5 14427391 14427422 -185202728 + (TA)n Simple_repeat Simple_repeat 1 31 0 330 264 38 0 chr5 14427439 14427545 -185202605 + (TA)n Simple_repeat Simple_repeat 2 111 0 185 359 113 0 chr5 14427833 14427939 -185202211 + L2 LINE L2 3122 3239 -33 11928 198 24 26 chr5 14427956 14430520 -185199630 - L1PA15 LINE L1 -12 7591 5026 252 149 0 0 chr5 14430520 14430567 -185199583 + (TTCC)n Simple_repeat Simple_repeat 1 47 0 2256 89 7 3 chr5 14430567 14430859 -185199291 - AluSg SINE Alu -17 293 1 11928 198 24 26 chr5 14430859 14433887 -185196263 - L1PA15 LINE L1 -2575 5028 1990 398 307 71 17 chr5 14433947 14434185 -185195965 - L1ME LINE L1 -374 5747 5497 231 259 0 0 chr5 14434271 14434325 -185195825 - L1ME LINE L1 -753 5421 5368 258 185 19 0 chr5 14434651 14434705 -185195445 - L1MC/D LINE L1 -2013 5795 5741 1170 220 57 14 chr5 14434835 14435117 -185195033 + MLT1D LTR MaLR 1 294 -211 442 252 162 56 chr5 14435575 14435841 -185194309 + L2 LINE L2 3020 3313 0 279 167 0 0 chr5 14439033 14439099 -185191051 + GA-rich Low_complexity Low_complexity 2 67 0 989 172 28 189 chr5 14440275 14440629 -185189521 + MLT1A1 LTR MaLR 64 360 -5 303 285 124 85 chr5 14441170 14441524 -185188626 - L1MEc LINE L1 -4087 2309 1942 371 324 76 25 chr5 14441617 14441984 -185188166 - L1MEc LINE L1 -4564 1832 1447 29 0 0 0 chr5 14442423 14442452 -185187698 + AT_rich Low_complexity Low_complexity 1 29 0 188 83 0 28 chr5 14442826 14442862 -185187288 + (TA)n Simple_repeat Simple_repeat 1 35 0 2200 177 114 0 chr5 14443372 14443812 -185186338 + LTR44 LTR ERV1 26 515 -4 444 227 70 39 chr5 14444639 14444767 -185185383 - MER20 DNA MER1_type -87 132 1 768 143 42 0 chr5 14445073 14445192 -185184958 + MER2 DNA MER2_type 1 124 -221 488 121 30 202 chr5 14445324 14445522 -185184628 + MER2 DNA MER2_type 125 288 -57 730 325 28 0 chr5 14445900 14446152 -185183998 - MIR SINE MIR -3 259 1 1085 183 27 5 chr5 14446514 14446733 -185183417 + MLT1C LTR MaLR 1 224 -243 18989 178 25 18 chr5 14498388 14500422 -185129728 - L1MA2 LINE L1 0 7723 5704 2087 118 0 16 chr5 14500422 14500728 -185129422 - AluSx SINE Alu -11 301 1 18989 178 25 18 chr5 14500728 14501747 -185128403 - L1MA2 LINE L1 -2019 5704 4693 2275 88 6 31 chr5 14501747 14502066 -185128084 - AluY SINE Alu 0 311 1 18989 178 25 18 chr5 14502066 14506670 -185123480 - L1MA2 LINE L1 -3030 4693 16 1571 270 56 51 chr5 14506888 14507510 -185122640 + MLT1E2 LTR MaLR 2 626 0 368 262 94 78 chr5 14507572 14507763 -185122387 - MIR SINE MIR -14 248 55 481 271 68 50 chr5 14507768 14508207 -185121943 - Charlie2a DNA MER1_type -486 2376 1930 337 211 61 9 chr5 14508254 14508368 -185121782 - Charlie2a DNA MER1_type -1236 1626 1507 452 349 68 24 chr5 14509278 14509527 -185120623 - MIR SINE MIR 0 262 3 1139 195 46 4 chr5 14510486 14510727 -185119423 + L1PA16 LINE L1 5913 6163 -3 26 64 0 0 chr5 14510776 14510823 -185119327 + AT_rich Low_complexity Low_complexity 1 47 0 1437 301 86 32 chr5 14510939 14511696 -185118454 + L2 LINE L2 20 817 -2497 690 294 84 4 chr5 14511699 14511961 -185118189 + L2 LINE L2 1413 1695 -1619 1049 222 77 14 chr5 14512506 14512803 -185117347 + L1ME1 LINE L1 5847 6162 -4 37 99 0 0 chr5 14512964 14513085 -185117065 + AT_rich Low_complexity Low_complexity 1 121 0 1691 174 65 11 chr5 14513202 14513558 -185116592 + THE1C LTR MaLR 1 375 0 9245 138 12 39 chr5 14513560 14515181 -185114969 + THE1C-int LTR MaLR 3 1580 0 1598 182 78 28 chr5 14515181 14515538 -185114612 + THE1C LTR MaLR 1 375 0 3886 247 43 22 chr5 14515545 14516907 -185113243 + L1M4 LINE L1 3906 5296 -850 630 234 22 0 chr5 14516889 14517073 -185113077 + L1MA7 LINE L1 6104 6291 0 * 293 176 0 0 chr5 14517120 14517171 -185112979 + L1MD3 LINE L1 7749 7799 -196 * 1183 204 40 30 chr5 14517165 14517194 -185112956 + L1MC2 LINE L1 6013 6040 -304 805 241 172 30 chr5 14517194 14517600 -185112550 + MER31B LTR ERV1 3 466 0 1183 204 40 30 chr5 14517600 14517874 -185112276 + L1MC2 LINE L1 6040 6319 -25 366 341 139 8 chr5 14517955 14518207 -185111943 - L2 LINE L2 -1004 2310 2026 335 103 21 98 chr5 14518443 14518637 -185111513 + (TA)n Simple_repeat Simple_repeat 1 179 0 639 87 0 77 chr5 14518684 14518879 -185111271 + (TA)n Simple_repeat Simple_repeat 1 180 0 654 75 0 80 chr5 14518919 14519106 -185111044 + (TA)n Simple_repeat Simple_repeat 1 172 0 726 72 0 77 chr5 14519122 14519317 -185110833 + (TA)n Simple_repeat Simple_repeat 1 180 0 1886 147 4 0 chr5 14519321 14519600 -185110550 - AluSx SINE Alu -32 280 1 241 319 35 26 chr5 14519611 14519727 -185110423 + MER89 LTR ERV1 405 521 -38 1283 244 90 17 chr5 14520914 14521381 -185108769 - MLT1D LTR MaLR 0 505 5 23 0 0 0 chr5 14521538 14521561 -185108589 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 14522350 14522380 -185107770 + AT_rich Low_complexity Low_complexity 1 30 0 413 276 0 0 chr5 14523310 14523408 -185106742 - MER5A DNA MER1_type -81 108 11 23 33 0 0 chr5 14523541 14523571 -185106579 + AT_rich Low_complexity Low_complexity 1 30 0 545 281 79 0 chr5 14524226 14524390 -185105760 + MIR SINE MIR 78 254 -8 1648 172 75 26 chr5 14524390 14524738 -185105412 - MLT1A1 LTR MaLR 0 365 1 646 249 150 43 chr5 14524911 14525164 -185104986 - MER110 LTR ERV1 -6 485 206 293 67 0 22 chr5 14525848 14525893 -185104257 + (TTCCC)n Simple_repeat Simple_repeat 5 48 0 326 195 22 28 chr5 14525901 14526081 -185104069 + CT-rich Low_complexity Low_complexity 1 179 0 307 60 40 0 chr5 14526079 14526129 -185104021 + (TCC)n Simple_repeat Simple_repeat 3 54 0 * 186 226 11 32 chr5 14526951 14527044 -185103106 + GA-rich Low_complexity Low_complexity 2 92 0 246 132 85 19 chr5 14527350 14527456 -185102694 + (TA)n Simple_repeat Simple_repeat 2 114 0 1387 141 60 56 chr5 14527467 14527751 -185102399 - THE1B LTR MaLR 0 364 80 620 51 26 0 chr5 14527893 14527971 -185102179 - THE1B LTR MaLR -284 80 1 340 208 0 62 chr5 14528023 14528119 -185102031 - L1MC4 LINE L1 -1339 6703 6614 48 32 0 0 chr5 14528295 14528357 -185101793 + AT_rich Low_complexity Low_complexity 1 62 0 863 181 80 43 chr5 14528723 14528911 -185101239 - MER20 DNA MER1_type -24 195 1 25 0 0 0 chr5 14529141 14529166 -185100984 + AT_rich Low_complexity Low_complexity 1 25 0 504 278 50 6 chr5 14529846 14530026 -185100124 + MER5A DNA MER1_type 2 189 0 375 23 0 0 chr5 14530926 14530970 -185099180 + (TG)n Simple_repeat Simple_repeat 2 45 0 2336 57 0 17 chr5 14531813 14532112 -185098038 - AluY SINE Alu -17 294 1 251 319 48 32 chr5 14532484 14532672 -185097478 - MARNA DNA Mariner -15 571 381 29 28 0 0 chr5 14532675 14532711 -185097439 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 14532807 14532828 -185097322 + AT_rich Low_complexity Low_complexity 1 21 0 269 109 22 0 chr5 14532871 14532917 -185097233 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 34 24 0 0 chr5 14532949 14532990 -185097160 + AT_rich Low_complexity Low_complexity 1 41 0 1703 147 3 20 chr5 14533247 14533553 -185096597 - AluJo SINE Alu -8 304 4 293 280 0 0 chr5 14534146 14534239 -185095911 + GA-rich Low_complexity Low_complexity 2 94 0 396 0 0 0 chr5 14535527 14535571 -185094579 + (CA)n Simple_repeat Simple_repeat 2 45 0 200 289 0 0 chr5 14535583 14535635 -185094515 + GA-rich Low_complexity Low_complexity 2 53 0 1332 222 40 0 chr5 14535636 14535960 -185094190 - MLT2C2 LTR ERVL -61 336 1 758 313 85 42 chr5 14535963 14536708 -185093442 + L2 LINE L2 2424 3192 -121 29 47 0 0 chr5 14537110 14537153 -185092997 + AT_rich Low_complexity Low_complexity 1 43 0 491 318 8 42 chr5 14537329 14537565 -185092585 + L1MDa LINE L1 113 340 -6200 1602 254 89 24 chr5 14537767 14538754 -185091396 + L1MDa LINE L1 990 5739 -801 1740 239 91 6 chr5 14538815 14539341 -185090809 + L1M2c LINE L1 1387 1957 -4832 631 224 39 54 chr5 14539348 14539607 -185090543 - MER69 DNA AcHobo -91 2435 2181 5156 158 2 36 chr5 14539620 14540638 -185089512 - L1PA15 LINE L1 -2 6163 5180 767 152 0 33 chr5 14540934 14541085 -185089065 + L1MA4 LINE L1 6151 6296 -4 29 28 0 0 chr5 14541132 14541168 -185088982 + AT_rich Low_complexity Low_complexity 1 36 0 7028 51 12 0 chr5 14542265 14543965 -185086185 + L1PA7 LINE L1 4437 6146 -8 1797 187 14 36 chr5 14544410 14544830 -185085320 + MLT1B LTR MaLR 1 390 0 3358 11 0 0 chr5 14545289 14545670 -185084480 - L1HS LINE L1 -1 6154 5774 16256 23 0 0 chr5 14545670 14547598 -185082552 + L1P LINE L1 2419 4346 -1800 2143 72 4 0 chr5 14548619 14548883 -185081267 - AluSq SINE Alu -26 287 23 221 224 35 47 chr5 14549850 14549935 -185080215 + GA-rich Low_complexity Low_complexity 2 85 0 787 355 61 28 chr5 14550049 14550542 -185079608 + LTR33 LTR ERVL 6 514 -7 23 0 0 0 chr5 14551339 14551362 -185078788 + AT_rich Low_complexity Low_complexity 1 23 0 490 254 66 75 chr5 14551536 14551749 -185078401 - MLT1H LTR MaLR -338 211 1 489 291 71 11 chr5 14552259 14552441 -185077709 - MLT1E1 LTR MaLR -83 571 379 387 258 210 0 chr5 14552523 14552690 -185077460 - MLT1E1 LTR MaLR -420 204 3 4410 89 8 2 chr5 14553340 14553948 -185076202 + LTR10E LTR ERV1 1 612 -21 1030 353 70 23 chr5 14554073 14555609 -185074541 + HERVL LTR ERVL 2061 3628 -2026 2796 131 9 9 chr5 14556153 14556611 -185073539 + L1PA16 LINE L1 5709 6166 0 396 364 96 29 chr5 14557794 14558137 -185072013 + L2 LINE L2 2942 3307 -6 21 0 0 0 chr5 14558782 14558803 -185071347 + AT_rich Low_complexity Low_complexity 1 21 0 342 67 0 0 chr5 14559460 14559505 -185070645 + (TG)n Simple_repeat Simple_repeat 1 45 0 282 95 0 0 chr5 14559507 14559549 -185070601 + (GA)n Simple_repeat Simple_repeat 2 43 0 17896 200 16 12 chr5 14559710 14566416 -185063734 + L1PA13 LINE L1 1 6746 -68 1003 215 45 4 chr5 14566403 14566649 -185063501 + L1M4 LINE L1 3514 3769 -2377 * 340 222 20 0 chr5 14566655 14566754 -185063396 + L1M4 LINE L1 4949 5049 -1097 2475 198 50 9 chr5 14568200 14568735 -185061415 - MER89 LTR ERV1 -2 557 1 617 347 125 15 chr5 14568775 14569184 -185060966 + L2 LINE L2 2812 3265 -48 487 289 65 18 chr5 14569967 14570306 -185059844 + L1MC/D LINE L1 3105 3459 -2687 391 279 58 0 chr5 14570371 14570543 -185059607 + L1MC/D LINE L1 3592 3773 -2373 1357 250 82 52 chr5 14570635 14571447 -185058703 + L1MC/D LINE L1 4229 5065 -1081 411 21 0 0 chr5 14571598 14571646 -185058504 + (TG)n Simple_repeat Simple_repeat 2 49 0 322 256 11 0 chr5 14571653 14571743 -185058407 + L1ME1 LINE L1 6070 6160 -6 230 346 8 8 chr5 14571750 14571877 -185058273 + L1MEc LINE L1 1624 1750 -4646 308 77 19 0 chr5 14572116 14572168 -185057982 + (TTTTA)n Simple_repeat Simple_repeat 3 55 0 1848 137 0 45 chr5 14572170 14572462 -185057688 - AluSx SINE Alu -33 279 1 505 304 60 54 chr5 14572491 14573083 -185057067 + L1MEc LINE L1 2047 2676 -3539 269 209 12 23 chr5 14573138 14573224 -185056926 + L1MC/D LINE L1 5265 5349 -797 487 322 51 30 chr5 14573280 14573575 -185056575 + L1MC/D LINE L1 5462 5762 -2046 337 239 31 8 chr5 14573575 14573705 -185056445 + (TA)n Simple_repeat Simple_repeat 1 133 0 248 299 72 66 chr5 14574961 14575128 -185055022 + L2 LINE L2 2797 2964 -350 342 67 0 0 chr5 14575315 14575360 -185054790 + (TG)n Simple_repeat Simple_repeat 2 46 0 207 268 127 0 chr5 14575361 14575432 -185054718 + L2 LINE L2 3193 3272 0 2669 184 39 35 chr5 14576354 14576946 -185053204 + L1MB1 LINE L1 5547 6140 -49 1739 210 71 5 chr5 14576950 14577149 -185053001 - MSTB LTR MaLR -4 422 237 270 0 0 0 chr5 14577149 14577179 -185052971 + (GA)n Simple_repeat Simple_repeat 1 30 0 1739 210 71 5 chr5 14577179 14577375 -185052775 - MSTB LTR MaLR -189 237 1 4191 179 35 5 chr5 14577375 14578136 -185052014 - MSTB-int LTR MaLR 0 1651 868 1754 159 159 5 chr5 14578245 14578615 -185051535 + MSTA LTR MaLR 1 427 -1 612 116 54 0 chr5 14578619 14578731 -185051419 - L1MA7 LINE L1 -2 6289 6172 2380 67 0 0 chr5 14579217 14579534 -185050616 - AluY SINE Alu 0 317 1 206 259 7 140 chr5 14580139 14580282 -185049868 + L2 LINE L2 3186 3309 -4 951 322 98 33 chr5 14580427 14580996 -185049154 + L1MA6 LINE L1 89 694 -6155 715 321 4 2 chr5 14581234 14581452 -185048698 + L1MA6 LINE L1 1335 1565 -5284 * 3764 235 99 6 chr5 14581449 14582729 -185047421 + L1MA6 LINE L1 2799 4202 -2646 760 73 0 18 chr5 14582733 14582842 -185047308 + LTR7 LTR ERV1 342 448 -2 15538 104 52 12 chr5 14582844 14585683 -185044467 + HERVH LTR ERV1 1 2995 -4718 944 140 7 0 chr5 14585662 14585812 -185044338 + HERVH LTR ERV1 3140 3290 -4423 * 1053 142 0 6 chr5 14585802 14585964 -185044186 + HERVH LTR ERV1 3492 3652 -4061 * 4607 62 5 8 chr5 14585956 14586566 -185043584 + HERVH LTR ERV1 7106 7713 0 1587 127 65 113 chr5 14586566 14586999 -185043151 + LTR7 LTR ERV1 1 412 -38 4611 205 69 52 chr5 14587040 14587848 -185042302 + L1MA6 LINE L1 4212 5005 -2015 1214 123 5 5 chr5 14587848 14588052 -185042098 - L1MA2 LINE L1 0 6304 6101 4611 205 69 52 chr5 14588052 14589948 -185040202 + L1MA6 LINE L1 5005 7020 0 3259 93 9 9 chr5 14590055 14590507 -185039643 - MLT2A2 LTR ERVL -1 452 1 25 31 0 0 chr5 14591158 14591190 -185038960 + AT_rich Low_complexity Low_complexity 1 32 0 2034 131 0 26 chr5 14592058 14592371 -185037779 + AluSg SINE Alu 1 305 -5 252 59 0 0 chr5 14592434 14592468 -185037682 + (TG)n Simple_repeat Simple_repeat 2 35 0 738 278 66 5 chr5 14592781 14592993 -185037157 + MIR SINE MIR 8 232 -30 21 57 0 0 chr5 14593018 14593053 -185037097 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr5 14593093 14593125 -185037025 + AT_rich Low_complexity Low_complexity 1 32 0 556 115 18 0 chr5 14593421 14593534 -185036616 + (TAGA)n Simple_repeat Simple_repeat 3 117 0 264 353 98 20 chr5 14593542 14593837 -185036313 + L2 LINE L2 2325 2642 -672 327 305 69 11 chr5 14593903 14594077 -185036073 - MIR SINE MIR -16 246 63 185 254 164 74 chr5 14594284 14594406 -185035744 + L2 LINE L2 3139 3271 -1 705 238 84 5 chr5 14595347 14595549 -185034601 - MLT1A1 LTR MaLR 0 365 148 3204 123 20 2 chr5 14595594 14596096 -185034054 - L1PA13 LINE L1 0 6163 5653 549 148 11 0 chr5 14596096 14596184 -185033966 + L1PA13 LINE L1 5529 5620 -543 2353 126 0 17 chr5 14596184 14596540 -185033610 + THE1C LTR MaLR 24 373 -2 14513 186 20 2 chr5 14596547 14599411 -185030739 - L1PA13 LINE L1 -845 5301 2386 561 283 26 7 chr5 14599415 14599567 -185030583 - MLT1A1 LTR MaLR -209 156 2 19615 168 14 10 chr5 14599751 14602419 -185027731 - L1PA11 LINE L1 0 6174 3472 2172 122 24 29 chr5 14602419 14602796 -185027354 + THE1C LTR MaLR 1 375 0 19615 168 14 10 chr5 14602796 14604772 -185025378 - L1PA11 LINE L1 -2702 3472 1507 295 146 18 18 chr5 14604833 14604888 -185025262 - THE1C-int LTR MaLR -1594 57 3 1859 137 76 25 chr5 14604890 14605247 -185024903 - THE1C LTR MaLR 0 375 1 1120 190 35 9 chr5 14605247 14605479 -185024671 - THE1C LTR MaLR -137 238 1 275 267 12 12 chr5 14605509 14605595 -185024555 + LTR37B LTR ERV1 222 307 -161 24 0 0 0 chr5 14606702 14606726 -185023424 + AT_rich Low_complexity Low_complexity 1 24 0 815 222 27 53 chr5 14607319 14607544 -185022606 - MER20 DNA MER1_type 0 219 1 243 214 0 0 chr5 14607737 14607779 -185022371 + MLT1K LTR MaLR 201 242 -346 1353 192 75 153 chr5 14608400 14608438 -185021712 - MER67D LTR ERV1 0 514 475 2372 124 14 8 chr5 14608438 14608800 -185021350 + THE1B LTR MaLR 1 364 0 1353 192 75 153 chr5 14608800 14609318 -185020832 - MER67D LTR ERV1 -39 475 1 21 0 0 0 chr5 14609391 14609412 -185020738 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 14609450 14609485 -185020665 + AT_rich Low_complexity Low_complexity 1 35 0 2569 91 14 0 chr5 14610563 14610913 -185019237 - THE1A LTR MaLR 0 355 1 6251 149 67 8 chr5 14610913 14611507 -185018643 - THE1A-int LTR MaLR 0 1651 1093 1973 138 0 33 chr5 14611507 14611811 -185018339 - AluSq SINE Alu -19 294 1 6251 149 67 8 chr5 14611811 14612641 -185017509 - THE1A-int LTR MaLR -558 1093 3 1871 116 8 0 chr5 14612643 14612910 -185017240 - THE1A LTR MaLR 0 355 87 2398 160 31 12 chr5 14612917 14613335 -185016815 + MSTB LTR MaLR 1 426 0 348 275 0 0 chr5 14613435 14613526 -185016624 - MER3 DNA MER1_type -111 98 8 2264 160 28 28 chr5 14614072 14614504 -185015646 + MSTB1 LTR MaLR 1 432 0 952 330 56 25 chr5 14614725 14615316 -185014834 - L2 LINE L2 -906 2408 1800 30 0 0 0 chr5 14615753 14615783 -185014367 + AT_rich Low_complexity Low_complexity 1 30 0 21 89 0 0 chr5 14616110 14616166 -185013984 + AT_rich Low_complexity Low_complexity 1 56 0 2819 217 133 60 chr5 14616405 14616921 -185013229 - L1MC3 LINE L1 -60 7725 7248 2682 48 6 0 chr5 14616921 14617254 -185012896 + L1PA4 LINE L1 5821 6155 0 2819 217 133 60 chr5 14617254 14617733 -185012417 - L1MC3 LINE L1 -537 7248 6657 2215 198 14 14 chr5 14617816 14618236 -185011914 - MSTC LTR MaLR -6 422 3 2970 282 44 31 chr5 14618237 14619376 -185010774 - L1MCb LINE L1 -4889 1156 3 1284 160 0 5 chr5 14620066 14620279 -185009871 - L1PA15 LINE L1 0 6165 5954 340 286 121 57 chr5 14621263 14621543 -185008607 - L2 LINE L2 -4 3309 3012 * 478 295 0 0 chr5 14621536 14621675 -185008475 - MIR SINE MIR -38 224 86 212 186 17 0 chr5 14621910 14621969 -185008181 + (TA)n Simple_repeat Simple_repeat 2 61 0 325 277 36 9 chr5 14622159 14622271 -185007879 - MIR SINE MIR 0 262 148 26 0 0 0 chr5 14622397 14622423 -185007727 + AT_rich Low_complexity Low_complexity 1 26 0 986 247 60 60 chr5 14623271 14623801 -185006349 - L1M4 LINE L1 -967 5179 4650 606 279 116 22 chr5 14623863 14624372 -185005778 - L1MEc LINE L1 -4153 2243 1687 12909 251 25 26 chr5 14624407 14626273 -185003877 + L1PB4 LINE L1 1 1868 -4939 2143 103 3 14 chr5 14626273 14626563 -185003587 - AluSx SINE Alu -12 300 14 12909 251 25 26 chr5 14626563 14627029 -185003121 + L1PB4 LINE L1 1868 2333 -4474 5573 28 0 0 chr5 14627029 14627678 -185002472 + L1PA3 LINE L1 5507 6155 0 12909 251 25 26 chr5 14627678 14627790 -185002360 + L1PB4 LINE L1 2333 2444 -4363 2380 157 23 23 chr5 14627790 14628146 -185002004 + MSTA LTR MaLR 1 359 -69 1681 189 18 0 chr5 14628146 14628432 -185001718 - AluJb SINE Alu -16 296 6 2380 157 23 23 chr5 14628432 14628503 -185001647 + MSTA LTR MaLR 358 428 0 12909 251 25 26 chr5 14628503 14629031 -185001119 + L1PB4 LINE L1 2444 2971 -3836 3056 139 12 10 chr5 14629031 14629543 -185000607 + MER75 DNA T2_type 1 513 -1 12909 251 25 26 chr5 14629543 14632833 -184997317 + L1PB4 LINE L1 2971 6807 0 25 75 0 0 chr5 14632837 14632890 -184997260 + AT_rich Low_complexity Low_complexity 1 53 0 450 350 69 41 chr5 14632995 14633105 -184997045 + L1ME3A LINE L1 5282 5387 -783 761 167 0 0 chr5 14633105 14633225 -184996925 + L1PB4 LINE L1 6022 6141 -15 450 350 69 41 chr5 14633225 14633755 -184996395 + L1ME3A LINE L1 5387 5940 -230 26 64 0 0 chr5 14633815 14633862 -184996288 + AT_rich Low_complexity Low_complexity 1 47 0 443 320 57 21 chr5 14634606 14634800 -184995350 + MIR SINE MIR 1 201 -61 1793 90 25 4 chr5 14635120 14635478 -184994672 + AluSc SINE Alu 35 397 0 212 231 15 31 chr5 14636073 14636138 -184994012 + (TATG)n Simple_repeat Simple_repeat 3 66 0 2377 114 0 11 chr5 14636704 14637055 -184993095 - THE1B LTR MaLR -17 347 1 1838 125 25 4 chr5 14637538 14637818 -184992332 - AluSg SINE Alu -24 286 1 25 51 0 0 chr5 14637818 14637857 -184992293 + AT_rich Low_complexity Low_complexity 1 39 0 265 130 0 56 chr5 14637862 14637916 -184992234 - AluSg/x SINE Alu -132 170 120 21 36 0 0 chr5 14637916 14637944 -184992206 + AT_rich Low_complexity Low_complexity 1 28 0 595 24 12 12 chr5 14639256 14639338 -184990812 + (TA)n Simple_repeat Simple_repeat 2 83 0 22 35 0 0 chr5 14639639 14639668 -184990482 + AT_rich Low_complexity Low_complexity 1 29 0 499 299 61 50 chr5 14639789 14640233 -184989917 + HAL1b LINE L1 149 597 -751 267 238 76 121 chr5 14640471 14640595 -184989555 - L2 LINE L2 -12 3301 3190 2043 162 12 0 chr5 14640595 14640928 -184989222 + MER1B DNA MER1_type 1 337 0 267 238 76 121 chr5 14640928 14641026 -184989124 - L2 LINE L2 -123 3190 3089 514 270 0 43 chr5 14641128 14641313 -184988837 - HERVL40 LTR ERVL -4256 1274 1098 1248 101 66 53 chr5 14641465 14641692 -184988458 - MER30 DNA MER1_type 0 230 1 1261 238 13 50 chr5 14641792 14642171 -184987979 - MLT1A1 LTR MaLR 0 365 1 237 330 27 9 chr5 14642246 14642358 -184987792 + LTR16C LTR ERVL 378 491 0 212 162 0 0 chr5 14642752 14642789 -184987361 + (CAA)n Simple_repeat Simple_repeat 2 38 0 683 236 17 28 chr5 14642824 14643002 -184987148 - FRAM SINE Alu 0 176 1 23 33 0 0 chr5 14643160 14643190 -184986960 + AT_rich Low_complexity Low_complexity 1 30 0 351 270 98 54 chr5 14647308 14647512 -184982638 - L1MC4 LINE L1 -1 8041 7829 594 211 34 91 chr5 14647554 14647763 -184982387 - L1ME2 LINE L1 -19 6145 5949 408 144 22 44 chr5 14647829 14647919 -184982231 - L1M1 LINE L1 -512 5793 5706 286 114 0 0 chr5 14647914 14647958 -184982192 + L1M2 LINE L1 5787 5830 -482 * 817 362 111 21 chr5 14647960 14648774 -184981376 + L2 LINE L2 2075 2961 -353 2186 117 3 7 chr5 14648933 14649240 -184980910 + AluSx SINE Alu 1 306 -6 360 269 19 10 chr5 14649277 14649381 -184980769 + MLT1J LTR MaLR 119 223 -288 300 200 0 0 chr5 14649477 14649547 -184980603 + (CA)n Simple_repeat Simple_repeat 2 71 0 287 339 79 18 chr5 14649660 14649825 -184980325 + L2 LINE L2 3139 3313 0 228 341 23 0 chr5 14649926 14650014 -184980136 - MER5B DNA MER1_type -82 96 7 339 96 0 0 chr5 14650682 14650734 -184979416 + (TA)n Simple_repeat Simple_repeat 1 52 0 385 168 30 30 chr5 14651700 14651801 -184978349 - MER53 DNA DNA -88 101 1 411 208 0 0 chr5 14651920 14651992 -184978158 + LTR16B LTR ERVL 393 464 0 351 271 98 20 chr5 14652710 14652962 -184977188 + L1ME1 LINE L1 5914 6141 -25 185 0 40 0 chr5 14653331 14653356 -184976794 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 336 303 70 13 chr5 14653616 14653817 -184976333 + L1MEc LINE L1 1010 1196 -5009 4617 68 45 0 chr5 14653817 14654418 -184975732 + MER11D LTR ERVK 270 897 0 7842 207 24 19 chr5 14654418 14656969 -184973181 - L1MA6 LINE L1 -328 5972 3338 574 200 9 0 chr5 14656970 14657075 -184973075 - U6 snRNA snRNA 0 107 2 342 306 110 23 chr5 14657084 14657303 -184972847 + L1MEc LINE L1 1220 1457 -4758 236 316 32 0 chr5 14657329 14657424 -184972726 + L1MC4 LINE L1 7573 7670 -372 1575 294 37 55 chr5 14658453 14659073 -184971077 + L1MA5 LINE L1 1 609 -6600 11889 236 35 36 chr5 14659424 14661043 -184969107 + L1MA5 LINE L1 1762 3381 -3827 1704 163 176 6 chr5 14661043 14661406 -184968744 + MSTA LTR MaLR 1 425 -3 11889 236 35 36 chr5 14661406 14662314 -184967836 + L1MA5 LINE L1 3381 4288 -2920 2160 176 31 12 chr5 14662314 14662734 -184967416 - MSTA LTR MaLR 0 428 1 11889 236 35 36 chr5 14662734 14664858 -184965292 + L1MA5 LINE L1 4288 6415 -793 836 88 64 0 chr5 14664858 14664983 -184965167 + MER85 DNA T2_type 1 133 -6 4905 163 30 4 chr5 14664984 14665907 -184964243 + L1MA5 LINE L1 6414 7360 -2 2492 253 40 12 chr5 14666720 14667440 -184962710 - L1ME1 LINE L1 -44 6122 5383 288 111 0 0 chr5 14667531 14667576 -184962574 + (GAAAA)n Simple_repeat Simple_repeat 2 46 0 1288 175 13 4 chr5 14667672 14667901 -184962249 + AluJb SINE Alu 82 312 0 450 324 92 33 chr5 14668103 14668438 -184961712 + L1M4 LINE L1 3392 3769 -2377 679 127 40 33 chr5 14668438 14668588 -184961562 + L1MA9 LINE L1 6162 6312 0 450 324 92 33 chr5 14668588 14668761 -184961389 + L1M4 LINE L1 3769 3930 -2216 763 234 139 50 chr5 14668905 14668952 -184961198 + LTR37B LTR ERV1 10 51 -417 1812 157 149 11 chr5 14668952 14669328 -184960822 - MSTA LTR MaLR 0 428 1 763 234 139 50 chr5 14669328 14669566 -184960584 + LTR37B LTR ERV1 51 346 -122 189 0 0 0 chr5 14669566 14669587 -184960563 + (TA)n Simple_repeat Simple_repeat 2 22 0 763 234 139 50 chr5 14669587 14669718 -184960432 + LTR37B LTR ERV1 346 464 -4 24 32 0 0 chr5 14669833 14669864 -184960286 + AT_rich Low_complexity Low_complexity 1 31 0 421 226 59 58 chr5 14670715 14670941 -184959209 + MER5C DNA MER1_type 6 321 -3 1852 206 72 28 chr5 14672832 14673292 -184956858 - L1MB7 LINE L1 0 6184 5705 1614 175 22 3 chr5 14673292 14673606 -184956544 + L1MB1 LINE L1 5848 6167 -1 243 0 0 0 chr5 14673672 14673699 -184956451 + (T)n Simple_repeat Simple_repeat 1 27 0 27 0 0 0 chr5 14673934 14673961 -184956189 + AT_rich Low_complexity Low_complexity 1 27 0 26 30 0 0 chr5 14675419 14675452 -184954698 + AT_rich Low_complexity Low_complexity 1 33 0 213 402 0 0 chr5 14675823 14675905 -184954245 + MIR SINE MIR 32 113 -149 311 307 150 38 chr5 14676480 14676773 -184953377 + L2 LINE L2 2827 3152 -161 288 307 59 10 chr5 14676800 14676901 -184953249 - MIR SINE MIR -125 137 32 244 349 148 10 chr5 14677167 14677376 -184952774 + MIR SINE MIR 18 255 -7 603 187 2 15 chr5 14677421 14677556 -184952594 - L1MD3 LINE L1 -1 7980 7666 527 266 68 21 chr5 14677545 14677737 -184952413 - L1MC4 LINE L1 -1226 6816 6616 * 23 33 0 0 chr5 14677859 14677889 -184952261 + AT_rich Low_complexity Low_complexity 1 30 0 3619 146 74 9 chr5 14677971 14678661 -184951489 + L1MA6 LINE L1 5564 6298 -2 1528 167 6 77 chr5 14678707 14679030 -184951120 - AluJo SINE Alu -12 300 1 4116 98 48 32 chr5 14679183 14679836 -184950314 - L1PA13 LINE L1 -4 6159 5497 4008 227 50 2 chr5 14679836 14680638 -184949512 - L1PA13 LINE L1 -5923 864 25 1755 162 66 41 chr5 14680757 14681121 -184949029 + Tigger2 DNA MER2_type 2334 2706 -12 3563 259 89 11 chr5 14681304 14682793 -184947357 + L1M4b LINE L1 1098 2693 -4874 436 258 0 0 chr5 14682796 14682889 -184947261 + MLT1A2 LTR MaLR 1 93 -281 228 94 0 0 chr5 14682960 14682992 -184947158 + LTR9 LTR ERV1 581 612 0 318 175 111 0 chr5 14683041 14683104 -184947046 + MLT1A2 LTR MaLR 293 362 -12 1370 244 40 93 chr5 14683143 14683786 -184946364 + LTR9 LTR ERV1 4 612 0 439 293 6 12 chr5 14683855 14684019 -184946131 + L1M4b LINE L1 2850 3012 -4553 2228 154 21 14 chr5 14684252 14684673 -184945477 + L1MA3 LINE L1 5882 6305 0 337 254 55 26 chr5 14684769 14685057 -184945093 + L1M4b LINE L1 3364 3625 -3942 375 284 69 0 chr5 14685088 14685204 -184944946 + L1M4b LINE L1 4567 4690 -2875 723 217 60 9 chr5 14685215 14685432 -184944718 + L1MB8 LINE L1 3657 3884 -3681 * 2122 257 26 15 chr5 14685427 14686175 -184943975 + L1MB8 LINE L1 4527 5283 -2282 1550 181 19 161 chr5 14686176 14686617 -184943533 + LTR60 LTR ERV1 1 340 -246 2069 164 22 11 chr5 14686617 14686988 -184943162 - THE1C LTR MaLR 0 375 1 1550 181 19 161 chr5 14686988 14687130 -184943020 + LTR60 LTR ERV1 340 501 -85 853 175 86 129 chr5 14687009 14687335 -184942815 + TAR1 Satellite telomeric 2 313 -1798 * 4055 212 54 73 chr5 14687335 14687469 -184942681 + L1MB8 LINE L1 5282 5417 -2186 2228 124 48 20 chr5 14687469 14687823 -184942327 + THE1B LTR MaLR 1 364 0 4055 212 54 73 chr5 14687823 14687935 -184942215 + L1MB8 LINE L1 5417 5530 -2073 3101 92 0 22 chr5 14687935 14688392 -184941758 - L1PA7 LINE L1 -5 6149 5703 4055 212 54 73 chr5 14688392 14689121 -184941029 + L1MB8 LINE L1 5530 6271 -1332 2214 74 0 3 chr5 14689121 14689427 -184940723 + AluY SINE Alu 2 306 0 4055 212 54 73 chr5 14689427 14689643 -184940507 + L1MB8 LINE L1 6271 6490 -1113 3807 111 45 2 chr5 14689643 14690220 -184939930 - LTR43 LTR ERV1 0 602 1 4055 212 54 73 chr5 14690220 14690514 -184939636 + L1MB8 LINE L1 6490 6788 -815 4317 110 16 6 chr5 14690514 14691152 -184938998 + LTR9B LTR ERV1 1 644 0 4055 212 54 73 chr5 14691152 14691613 -184938537 + L1MB8 LINE L1 6788 7206 -397 2243 145 78 15 chr5 14691615 14691818 -184938332 + LTR59 LTR ERV1 1 190 -407 4461 135 54 4 chr5 14691818 14692560 -184937590 - MER4E LTR ERV1 0 779 1 2243 145 78 15 chr5 14692560 14692764 -184937386 + LTR59 LTR ERV1 190 434 -163 6231 146 1 24 chr5 14692782 14693168 -184936982 - L1PB1 LINE L1 -2 6149 5756 234 0 0 0 chr5 14693168 14693194 -184936956 + (GA)n Simple_repeat Simple_repeat 2 27 0 6231 146 1 24 chr5 14693194 14694193 -184935957 - L1PB1 LINE L1 -395 5756 4800 2140 120 0 0 chr5 14694193 14694493 -184935657 - AluSg SINE Alu -10 300 1 6231 146 1 24 chr5 14694493 14694597 -184935553 - L1PB1 LINE L1 -1351 4800 4695 895 179 0 35 chr5 14694597 14694770 -184935380 + LTR59 LTR ERV1 426 592 -5 1250 223 67 32 chr5 14694773 14695146 -184935004 + L1MB8 LINE L1 7211 7596 -1 190 209 70 116 chr5 14695699 14695785 -184934365 - MIR SINE MIR -116 146 65 277 349 83 18 chr5 14697557 14697786 -184932364 - LTR16A1 LTR ERVL 0 457 214 349 260 144 19 chr5 14697983 14698165 -184931985 - MLT1H1 LTR MaLR -305 250 71 629 333 15 26 chr5 14698242 14698506 -184931644 - HERVL40 LTR ERVL -4017 1513 1253 1280 297 59 34 chr5 14698579 14699084 -184931066 - HERVL40 LTR ERVL -4415 1115 598 2249 85 0 19 chr5 14699112 14699430 -184930720 - AluSx SINE Alu 0 312 1 923 227 82 32 chr5 14699610 14699945 -184930205 + MSTD LTR MaLR 8 396 0 611 275 22 17 chr5 14699981 14700159 -184929991 - MLT1J2 LTR MaLR -251 199 21 21 0 0 0 chr5 14701234 14701255 -184928895 + AT_rich Low_complexity Low_complexity 1 21 0 2319 67 0 0 chr5 14701342 14701651 -184928499 - AluSg SINE Alu 0 309 1 27 29 0 0 chr5 14702265 14702299 -184927851 + AT_rich Low_complexity Low_complexity 1 34 0 27 73 0 0 chr5 14702874 14702929 -184927221 + AT_rich Low_complexity Low_complexity 1 55 0 2203 112 0 0 chr5 14705067 14705363 -184924787 - AluSg SINE Alu -14 296 1 1661 171 61 25 chr5 14705856 14706218 -184923932 + THE1C LTR MaLR 1 375 0 9565 138 7 33 chr5 14706221 14707807 -184922343 + THE1C-int LTR MaLR 4 1547 -33 1991 102 3 31 chr5 14708070 14708364 -184921786 - AluSp SINE Alu -8 305 20 1358 198 7 4 chr5 14708645 14708918 -184921232 - AluJo SINE Alu -14 298 25 35 41 0 0 chr5 14709290 14709339 -184920811 + AT_rich Low_complexity Low_complexity 1 49 0 2532 48 0 7 chr5 14710781 14711091 -184919059 - AluY SINE Alu 0 311 4 399 281 72 60 chr5 14711092 14711327 -184918823 - L1MDb LINE L1 -5082 1862 1625 271 300 0 0 chr5 14711811 14711881 -184918269 + (TG)n Simple_repeat Simple_repeat 2 71 0 6669 149 19 33 chr5 14712070 14712941 -184917209 - Tigger3b DNA MER2_type -1833 1195 344 2048 123 3 10 chr5 14712941 14713242 -184916908 - AluSx SINE Alu -9 303 5 6669 149 19 33 chr5 14713242 14713581 -184916569 - Tigger3b DNA MER2_type -2684 344 2 2273 53 0 7 chr5 14713944 14714227 -184915923 + AluY SINE Alu 3 283 -28 21 36 0 0 chr5 14715116 14715144 -184915006 + AT_rich Low_complexity Low_complexity 1 28 0 398 313 53 60 chr5 14715554 14715581 -184914569 + L2 LINE L2 1205 1231 -2083 2036 124 59 34 chr5 14715581 14715936 -184914214 - THE1B LTR MaLR 0 364 1 398 313 53 60 chr5 14715936 14716208 -184913942 + L2 LINE L2 1231 1502 -1812 566 217 39 34 chr5 14716209 14716388 -184913762 + MER33 DNA MER1_type 1 166 -93 1027 166 5 0 chr5 14716389 14716576 -184913574 + L1M2 LINE L1 2499 2686 -4163 528 204 34 54 chr5 14716576 14716723 -184913427 + MER33 DNA MER1_type 216 359 -4 2497 315 75 51 chr5 14716733 14718239 -184911911 + L2 LINE L2 1515 3054 -259 204 40 0 0 chr5 14718761 14718786 -184911364 + (A)n Simple_repeat Simple_repeat 1 25 0 210 71 0 0 chr5 14718844 14718872 -184911278 + (TTA)n Simple_repeat Simple_repeat 2 29 0 787 200 7 7 chr5 14718874 14719019 -184911131 - FRAM SINE Alu -30 146 2 22 35 0 0 chr5 14720492 14720521 -184909629 + AT_rich Low_complexity Low_complexity 1 29 0 1108 251 101 79 chr5 14721210 14721499 -184908651 - L1MDb LINE L1 -5017 1406 1125 2243 82 0 16 chr5 14721499 14721815 -184908335 - AluY SINE Alu 0 311 1 1108 251 101 79 chr5 14721815 14722131 -184908019 - L1MDb LINE L1 -5298 1125 788 24 0 0 0 chr5 14723822 14723846 -184906304 + AT_rich Low_complexity Low_complexity 1 24 0 922 186 16 5 chr5 14725350 14725538 -184904612 - Tigger4(Zombi) DNA MER2_type -2 2729 2540 * 1440 159 44 30 chr5 14725526 14725796 -184904354 - MER7A DNA MER2_type -64 282 11 679 343 56 75 chr5 14726014 14726723 -184903427 - L1MEd LINE L1 -5032 1087 392 409 106 0 15 chr5 14727400 14727466 -184902684 + L1PB4 LINE L1 6080 6144 -12 1140 232 89 35 chr5 14727771 14728141 -184902009 + MLT1B LTR MaLR 1 390 0 22 0 0 0 chr5 14729480 14729502 -184900648 + AT_rich Low_complexity Low_complexity 1 22 0 450 79 0 0 chr5 14729739 14729802 -184900348 + (TG)n Simple_repeat Simple_repeat 1 63 0 326 320 10 0 chr5 14731175 14731278 -184898872 + GA-rich Low_complexity Low_complexity 2 105 0 201 348 82 27 chr5 14731309 14731493 -184898657 + MIR SINE MIR 22 215 -47 1049 220 102 34 chr5 14731574 14731869 -184898281 - MLT1A1 LTR MaLR 0 365 51 27 81 0 0 chr5 14731939 14732001 -184898149 + AT_rich Low_complexity Low_complexity 1 62 0 289 313 0 24 chr5 14732670 14732753 -184897397 - L1MEd LINE L1 -5467 652 572 284 258 30 91 chr5 14733441 14733573 -184896577 - L2 LINE L2 -1 3271 3148 210 344 43 74 chr5 14733632 14733668 -184896482 - MIR3 SINE MIR -18 190 154 2116 91 0 0 chr5 14733668 14733955 -184896195 + L1PA5 LINE L1 5867 6153 -1 210 344 43 74 chr5 14733955 14734081 -184896069 - MIR3 SINE MIR -54 154 33 34 0 0 0 chr5 14734234 14734268 -184895882 + AT_rich Low_complexity Low_complexity 1 34 0 481 293 223 4 chr5 14736654 14736927 -184893223 - MLT1H LTR MaLR -16 533 201 738 346 74 0 chr5 14736982 14737291 -184892859 - MLT2E LTR ERVL -258 370 39 266 289 91 3 chr5 14737389 14737535 -184892615 - L1ME2 LINE L1 -49 6113 5967 1581 268 96 19 chr5 14737563 14738483 -184891667 - L1MD2 LINE L1 -462 5897 4899 4025 161 1 1 chr5 14738568 14739239 -184890911 - L1PA15 LINE L1 -3 7600 6930 9935 218 49 14 chr5 14739262 14741351 -184888799 - L1PA15 LINE L1 -913 6671 4473 1185 116 83 0 chr5 14741351 14741532 -184888618 + MER107 DNA MER1_type 1 196 -1 9935 218 49 14 chr5 14741532 14742012 -184888138 - L1PA15 LINE L1 -3111 4473 4011 4639 235 31 10 chr5 14742013 14743787 -184886363 - L1PA15 LINE L1 -3749 3835 2022 471 326 39 26 chr5 14745124 14745434 -184884716 - L1PA15 LINE L1 -7261 320 7 1516 261 130 36 chr5 14745455 14746844 -184883306 - L1MCb LINE L1 -4491 2073 570 647 279 116 70 chr5 14747049 14747464 -184882686 - L1MCb LINE L1 -5673 372 65 24 32 0 0 chr5 14747486 14747517 -184882633 + AT_rich Low_complexity Low_complexity 1 31 0 2170 119 0 0 chr5 14747700 14748003 -184882147 - AluY SINE Alu -8 303 1 1791 203 48 8 chr5 14748742 14749117 -184881033 + MLT1B LTR MaLR 1 390 0 495 325 69 12 chr5 14750327 14750647 -184879503 - MER46C DNA MER2_type 0 338 1 452 308 99 38 chr5 14750782 14751629 -184878521 - HAL1 LINE L1 -732 1775 877 246 213 16 0 chr5 14752441 14752502 -184877648 - MLT1E3 LTR MaLR 0 624 563 2055 255 74 12 chr5 14752512 14753077 -184877073 - MLT1E3 LTR MaLR -24 600 1 608 211 164 18 chr5 14753217 14753510 -184876640 + MLT1C LTR MaLR 6 352 -38 1238 239 4 0 chr5 14753902 14754170 -184875980 - MLT2D LTR ERVL -141 273 5 2225 104 0 7 chr5 14754174 14754483 -184875667 + AluSc SINE Alu 1 307 -2 239 250 47 0 chr5 14754713 14754777 -184875373 - MIR3 SINE MIR -19 189 123 25 105 0 0 chr5 14755279 14755374 -184874776 + AT_rich Low_complexity Low_complexity 1 95 0 2360 97 0 3 chr5 14755452 14755763 -184874387 - AluSg SINE Alu 0 310 1 22 56 0 0 chr5 14755949 14755985 -184874165 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 14756065 14756094 -184874056 + AT_rich Low_complexity Low_complexity 1 29 0 1656 259 111 8 chr5 14756453 14756474 -184873676 + L1MD2 LINE L1 3796 3813 -2333 5028 52 0 0 chr5 14756474 14757089 -184873061 + L1PA5 LINE L1 5534 6148 -6 1656 259 111 8 chr5 14757089 14757689 -184872461 + L1MD2 LINE L1 3813 4481 -1665 2581 267 98 16 chr5 14757765 14758527 -184871623 + L1MD2 LINE L1 4641 5339 -1020 213 39 0 0 chr5 14758527 14758553 -184871597 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 2581 267 98 16 chr5 14758553 14759371 -184870779 + L1MD2 LINE L1 5339 6348 -11 2199 190 13 43 chr5 14759539 14759761 -184870389 + MER74C LTR ERVL 11 213 -247 1869 181 39 31 chr5 14759761 14760148 -184870002 + MLT1B LTR MaLR 1 390 0 2199 190 13 43 chr5 14760148 14760389 -184869761 + MER74C LTR ERVL 213 460 0 278 266 58 22 chr5 14760409 14760548 -184869602 + L1MDa LINE L1 2311 2454 -4086 836 271 124 32 chr5 14760604 14761232 -184868918 + L1MDa LINE L1 2607 3292 -3248 1491 224 94 4 chr5 14761252 14761890 -184868260 - L1MCa LINE L1 -3947 2479 1867 374 177 149 10 chr5 14761893 14762070 -184868080 - MER67D LTR ERV1 0 514 236 1484 237 66 20 chr5 14762073 14762570 -184867580 - L1MCa LINE L1 -4758 1668 1149 242 207 17 0 chr5 14762575 14762633 -184867517 + L1ME2 LINE L1 6079 6137 -27 1437 176 3 76 chr5 14762651 14762940 -184867210 + AluJb SINE Alu 1 268 -44 1556 103 5 5 chr5 14762940 14763154 -184866996 + AluSg/x SINE Alu 95 308 -4 1521 216 78 8 chr5 14764245 14764721 -184865429 + L1MDa LINE L1 3386 3894 -2646 760 73 0 18 chr5 14764725 14764834 -184865316 + LTR7 LTR ERV1 342 448 -2 18060 105 62 12 chr5 14764836 14767689 -184862461 + HERVH LTR ERV1 1 2995 -4718 944 140 7 0 chr5 14767668 14767818 -184862332 + HERVH LTR ERV1 3140 3290 -4423 * 1053 142 0 6 chr5 14767808 14767970 -184862180 + HERVH LTR ERV1 3492 3652 -4061 * 4607 62 5 8 chr5 14767962 14768572 -184861578 + HERVH LTR ERV1 7106 7713 0 1570 129 65 113 chr5 14768572 14769005 -184861145 + LTR7 LTR ERV1 1 412 -38 252 0 0 0 chr5 14769005 14769033 -184861117 + (A)n Simple_repeat Simple_repeat 1 28 0 4805 217 87 51 chr5 14769056 14769864 -184860286 + L1MA6 LINE L1 3904 4682 -2030 1214 123 5 5 chr5 14769864 14770068 -184860082 - L1MA2 LINE L1 0 6304 6101 4805 217 87 51 chr5 14770068 14771964 -184858186 + L1MA6 LINE L1 4682 6712 0 3259 93 9 9 chr5 14772071 14772523 -184857627 - MLT2A2 LTR ERVL -1 452 1 25 31 0 0 chr5 14773174 14773206 -184856944 + AT_rich Low_complexity Low_complexity 1 32 0 2034 131 0 26 chr5 14774074 14774387 -184855763 + AluSg SINE Alu 1 305 -5 252 59 0 0 chr5 14774450 14774484 -184855666 + (TG)n Simple_repeat Simple_repeat 2 35 0 738 278 66 5 chr5 14774797 14775009 -184855141 + MIR SINE MIR 8 232 -30 21 57 0 0 chr5 14775034 14775069 -184855081 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr5 14775109 14775141 -184855009 + AT_rich Low_complexity Low_complexity 1 32 0 591 106 32 0 chr5 14775437 14775560 -184854590 + (TAGA)n Simple_repeat Simple_repeat 3 129 0 264 353 98 20 chr5 14775568 14775863 -184854287 + L2 LINE L2 2325 2642 -672 327 305 69 11 chr5 14775929 14776103 -184854047 - MIR SINE MIR -16 246 63 185 254 164 74 chr5 14776310 14776432 -184853718 + L2 LINE L2 3139 3271 -1 712 236 79 5 chr5 14777373 14777576 -184852574 - MLT1A1 LTR MaLR 0 365 148 3204 123 20 2 chr5 14777621 14778123 -184852027 - L1PA13 LINE L1 0 6163 5653 549 148 11 0 chr5 14778123 14778211 -184851939 + L1PA13 LINE L1 5529 5620 -548 2278 126 0 22 chr5 14778211 14778569 -184851581 + THE1C LTR MaLR 24 373 -2 14506 186 20 2 chr5 14778576 14781440 -184848710 - L1PA13 LINE L1 -845 5301 2386 561 283 26 7 chr5 14781444 14781596 -184848554 - MLT1A1 LTR MaLR -209 156 2 19555 166 14 14 chr5 14781780 14784448 -184845702 - L1PA11 LINE L1 0 6825 4140 2172 122 24 29 chr5 14784448 14784825 -184845325 + THE1C LTR MaLR 1 375 0 19555 166 14 14 chr5 14784825 14786835 -184843315 - L1PA11 LINE L1 -2685 4140 2133 298 183 17 17 chr5 14786877 14786937 -184843213 - THE1C-int LTR MaLR -1589 62 3 1859 137 76 25 chr5 14786939 14787296 -184842854 - THE1C LTR MaLR 0 375 1 1094 194 35 9 chr5 14787296 14787528 -184842622 - THE1C LTR MaLR -137 238 1 280 267 12 12 chr5 14787558 14787644 -184842506 + LTR37B LTR ERV1 222 307 -161 24 0 0 0 chr5 14788751 14788775 -184841375 + AT_rich Low_complexity Low_complexity 1 24 0 808 222 27 53 chr5 14789368 14789593 -184840557 - MER20 DNA MER1_type 0 219 1 244 214 0 0 chr5 14789786 14789828 -184840322 + MLT1K LTR MaLR 201 242 -346 1375 192 75 153 chr5 14790449 14790487 -184839663 - MER67D LTR ERV1 0 514 475 2358 124 14 8 chr5 14790487 14790849 -184839301 + THE1B LTR MaLR 1 364 0 1375 192 75 153 chr5 14790849 14791367 -184838783 - MER67D LTR ERV1 -39 475 1 21 0 0 0 chr5 14791440 14791461 -184838689 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 14791499 14791534 -184838616 + AT_rich Low_complexity Low_complexity 1 35 0 2551 91 14 0 chr5 14792612 14792962 -184837188 - THE1A LTR MaLR 0 355 1 6215 151 65 7 chr5 14792962 14793556 -184836594 - THE1A-int LTR MaLR 0 1651 1093 1968 135 0 33 chr5 14793556 14793860 -184836290 - AluSq SINE Alu -19 294 1 6215 151 65 7 chr5 14793860 14794690 -184835460 - THE1A-int LTR MaLR -558 1093 3 1876 116 8 0 chr5 14794692 14794960 -184835190 - THE1A LTR MaLR 0 355 86 2386 158 31 12 chr5 14794966 14795384 -184834766 + MSTB LTR MaLR 1 426 0 352 275 0 0 chr5 14795484 14795575 -184834575 - MER3 DNA MER1_type -111 98 8 2231 160 28 28 chr5 14796121 14796553 -184833597 + MSTB1 LTR MaLR 1 432 0 938 338 51 20 chr5 14796774 14797365 -184832785 - L2 LINE L2 -906 2408 1800 30 0 0 0 chr5 14797803 14797833 -184832317 + AT_rich Low_complexity Low_complexity 1 30 0 21 89 0 0 chr5 14798160 14798216 -184831934 + AT_rich Low_complexity Low_complexity 1 56 0 2878 217 133 60 chr5 14798455 14798971 -184831179 - L1MC3 LINE L1 -60 7725 7248 2668 48 6 0 chr5 14798971 14799304 -184830846 + L1PA4 LINE L1 5821 6155 0 2878 217 133 60 chr5 14799304 14799783 -184830367 - L1MC3 LINE L1 -537 7248 6657 2220 198 14 14 chr5 14799866 14800286 -184829864 - MSTC LTR MaLR -6 422 3 2989 283 43 31 chr5 14800287 14801427 -184828723 - L1MCb LINE L1 -4889 1156 3 1280 160 0 5 chr5 14802117 14802330 -184827820 - L1PA15 LINE L1 0 6165 5954 352 286 121 57 chr5 14803314 14803594 -184826556 - L2 LINE L2 -4 3309 3012 * 490 295 0 0 chr5 14803587 14803726 -184826424 - MIR SINE MIR -38 224 86 212 186 17 0 chr5 14803961 14804020 -184826130 + (TA)n Simple_repeat Simple_repeat 2 61 0 329 277 36 9 chr5 14804210 14804322 -184825828 - MIR SINE MIR 0 262 148 26 0 0 0 chr5 14804448 14804474 -184825676 + AT_rich Low_complexity Low_complexity 1 26 0 1045 246 62 60 chr5 14805320 14805849 -184824301 - L1M4 LINE L1 -967 5179 4650 665 279 116 22 chr5 14805911 14806420 -184823730 - L1MEc LINE L1 -4153 2243 1687 13215 252 24 26 chr5 14806455 14808321 -184821829 + L1PB4 LINE L1 1 1868 -4939 2120 100 3 14 chr5 14808321 14808610 -184821540 - AluSx SINE Alu -13 299 14 13215 252 24 26 chr5 14808610 14809076 -184821074 + L1PB4 LINE L1 1868 2333 -4474 5550 28 0 0 chr5 14809076 14809725 -184820425 + L1PA3 LINE L1 5507 6155 0 13215 252 24 26 chr5 14809725 14809837 -184820313 + L1PB4 LINE L1 2333 2444 -4363 2357 157 23 23 chr5 14809837 14810193 -184819957 + MSTA LTR MaLR 1 359 -69 1629 188 17 3 chr5 14810193 14810480 -184819670 - AluJb SINE Alu -16 296 6 2357 157 23 23 chr5 14810480 14810551 -184819599 + MSTA LTR MaLR 358 428 0 13215 252 24 26 chr5 14810551 14811079 -184819071 + L1PB4 LINE L1 2444 2971 -3836 3069 139 12 10 chr5 14811079 14811591 -184818559 + MER75 DNA T2_type 1 513 -1 13215 252 24 26 chr5 14811591 14814881 -184815269 + L1PB4 LINE L1 2971 6807 0 25 75 0 0 chr5 14814885 14814938 -184815212 + AT_rich Low_complexity Low_complexity 1 53 0 439 349 68 42 chr5 14815043 14815153 -184814997 + L1ME3A LINE L1 5282 5388 -782 761 167 0 0 chr5 14815153 14815273 -184814877 + L1PB4 LINE L1 6022 6141 -15 439 349 68 42 chr5 14815273 14815804 -184814346 + L1ME3A LINE L1 5388 5940 -230 26 64 0 0 chr5 14815864 14815911 -184814239 + AT_rich Low_complexity Low_complexity 1 47 0 445 341 55 18 chr5 14816655 14816875 -184813275 + MIR SINE MIR 1 228 -34 1793 90 25 4 chr5 14817169 14817520 -184812630 + AluSc SINE Alu 35 390 0 212 231 15 31 chr5 14818108 14818173 -184811977 + (TATG)n Simple_repeat Simple_repeat 3 66 0 2377 114 0 11 chr5 14818739 14819090 -184811060 - THE1B LTR MaLR -17 347 1 1838 125 25 4 chr5 14819573 14819853 -184810297 - AluSg SINE Alu -24 286 1 25 51 0 0 chr5 14819853 14819892 -184810258 + AT_rich Low_complexity Low_complexity 1 39 0 265 130 0 56 chr5 14819897 14819951 -184810199 - AluSg/x SINE Alu -132 170 120 21 36 0 0 chr5 14819951 14819979 -184810171 + AT_rich Low_complexity Low_complexity 1 28 0 490 40 14 14 chr5 14821291 14821365 -184808785 + (TA)n Simple_repeat Simple_repeat 2 75 0 499 299 61 50 chr5 14821816 14822260 -184807890 + HAL1b LINE L1 149 597 -751 267 238 76 121 chr5 14822498 14822622 -184807528 - L2 LINE L2 -12 3301 3190 2043 162 12 0 chr5 14822622 14822955 -184807195 + MER1B DNA MER1_type 1 337 0 267 238 76 121 chr5 14822955 14823053 -184807097 - L2 LINE L2 -123 3190 3089 514 270 0 43 chr5 14823155 14823340 -184806810 - HERVL40 LTR ERVL -4256 1274 1098 1226 105 61 53 chr5 14823492 14823720 -184806430 - MER30 DNA MER1_type 0 230 1 1271 235 16 50 chr5 14823820 14824198 -184805952 - MLT1A1 LTR MaLR 0 365 1 237 330 27 9 chr5 14824273 14824385 -184805765 + LTR16C LTR ERVL 378 491 0 212 162 0 0 chr5 14824779 14824816 -184805334 + (CAA)n Simple_repeat Simple_repeat 2 38 0 683 236 17 28 chr5 14824851 14825029 -184805121 - FRAM SINE Alu 0 176 1 23 33 0 0 chr5 14825187 14825217 -184804933 + AT_rich Low_complexity Low_complexity 1 30 0 32 57 0 0 chr5 14827087 14827140 -184803010 + AT_rich Low_complexity Low_complexity 1 53 0 1799 168 3 0 chr5 14827576 14827861 -184802289 + AluJb SINE Alu 6 291 -21 24 0 0 0 chr5 14828020 14828044 -184802106 + AT_rich Low_complexity Low_complexity 1 24 0 2261 60 42 0 chr5 14828319 14828604 -184801546 + AluY SINE Alu 1 297 -14 27 49 0 0 chr5 14828816 14828857 -184801293 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr5 14829708 14829731 -184800419 + AT_rich Low_complexity Low_complexity 1 23 0 2213 105 3 0 chr5 14830050 14830355 -184799795 + AluSg1 SINE Alu 1 306 -3 30 0 0 0 chr5 14830645 14830675 -184799475 + AT_rich Low_complexity Low_complexity 1 30 0 2111 124 0 3 chr5 14830832 14831138 -184799012 - AluSx SINE Alu -7 305 1 2592 192 98 32 chr5 14831969 14832663 -184797487 - MER45R DNA AcHobo -1 1580 828 2084 187 57 9 chr5 14832663 14833069 -184797081 - LOR1b LTR ERV1 -2 459 29 257 50 0 25 chr5 14833069 14833109 -184797041 + (CAA)n Simple_repeat Simple_repeat 1 39 0 2084 187 57 9 chr5 14833109 14833140 -184797010 - LOR1b LTR ERV1 -432 29 1 2592 192 98 32 chr5 14833140 14833220 -184796930 - MER45R DNA AcHobo -753 828 755 22 0 0 0 chr5 14833408 14833430 -184796720 + AT_rich Low_complexity Low_complexity 1 22 0 1308 207 17 20 chr5 14833446 14833741 -184796409 - AluJo SINE Alu -18 294 1 296 346 0 44 chr5 14834418 14834554 -184795596 + LTR33 LTR ERVL 17 146 -375 2792 235 88 17 chr5 14834672 14834748 -184795402 - L1M4 LINE L1 -869 5277 5208 1684 181 25 0 chr5 14834748 14835062 -184795088 - L1PA16 LINE L1 0 6166 5845 2792 235 88 17 chr5 14835062 14835968 -184794182 - L1M4 LINE L1 -938 5208 4226 186 133 0 0 chr5 14835995 14836025 -184794125 + (TATG)n Simple_repeat Simple_repeat 1 30 0 241 221 0 35 chr5 14836494 14836580 -184793570 - L1ME3A LINE L1 -194 5976 5894 1986 142 64 6 chr5 14836656 14837000 -184793150 - THE1B LTR MaLR 0 364 1 11349 104 1 2 chr5 14837000 14838581 -184791569 - THE1B-int LTR MaLR 0 1580 1 2214 122 48 20 chr5 14838581 14838935 -184791215 - THE1B LTR MaLR 0 364 1 326 349 34 7 chr5 14839071 14839217 -184790933 + LTR16A LTR ERVL 1 150 -300 624 349 49 0 chr5 14839406 14839690 -184790460 + MERVL LTR ERVL 8 305 -4691 412 333 50 5 chr5 14839697 14839895 -184790255 + MERVL LTR ERVL 1693 1899 -3097 280 390 29 10 chr5 14840118 14840323 -184789827 + MERVL LTR ERVL 4738 4946 -539 439 278 71 50 chr5 14840849 14841410 -184788740 - L1M4 LINE L1 -1319 4827 4255 701 138 9 0 chr5 14841412 14841521 -184788629 - THE1C LTR MaLR 0 375 266 905 192 78 0 chr5 14841652 14841819 -184788331 + AluJo SINE Alu 1 180 -132 486 287 33 0 chr5 14841919 14842041 -184788109 - L1M4 LINE L1 -2022 4124 3999 680 187 0 8 chr5 14842071 14842194 -184787956 - L1PA16 LINE L1 -3 6163 6042 242 183 0 61 chr5 14843362 14843444 -184786706 + (TA)n Simple_repeat Simple_repeat 2 78 0 25 75 0 0 chr5 14943516 14943569 -184686581 + AT_rich Low_complexity Low_complexity 1 53 0 913 62 62 0 chr5 14943693 14943822 -184686328 - L1PA13 LINE L1 0 6163 6027 186 103 0 0 chr5 14944089 14944118 -184686032 + (CA)n Simple_repeat Simple_repeat 2 30 0 28 29 0 0 chr5 14944118 14944153 -184685997 + AT_rich Low_complexity Low_complexity 1 35 0 522 83 24 0 chr5 14944846 14944930 -184685220 - L1PA13 LINE L1 -147 6016 5931 857 286 22 41 chr5 14944958 14945498 -184684652 - L1M4 LINE L1 -2369 3777 3254 350 246 51 51 chr5 14945646 14945764 -184684386 + L2 LINE L2 2102 2219 -1095 222 37 0 0 chr5 14946166 14946193 -184683957 + (TG)n Simple_repeat Simple_repeat 2 28 0 220 218 18 0 chr5 14947496 14947551 -184682599 + (CATATA)n Simple_repeat Simple_repeat 6 61 0 338 178 11 33 chr5 14948247 14948337 -184681813 + L1MA8 LINE L1 6200 6287 -4 267 271 67 51 chr5 14948343 14948598 -184681552 + L1M4 LINE L1 4349 4607 -1539 954 101 25 0 chr5 14948870 14949028 -184681122 - HERVL LTR ERVL -147 5507 5346 182 316 40 13 chr5 14949136 14949212 -184680938 - L2 LINE L2 -780 2534 2457 699 210 7 45 chr5 14949274 14949562 -184680588 - MLT1A1 LTR MaLR 0 374 1 31 26 0 0 chr5 14949589 14949627 -184680523 + AT_rich Low_complexity Low_complexity 1 38 0 280 383 93 35 chr5 14949627 14950197 -184679953 - L2 LINE L2 -962 2352 1750 342 143 0 0 chr5 14950309 14950365 -184679785 - MLT2A2 LTR ERVL 0 515 460 265 344 0 0 chr5 14950367 14950492 -184679658 + (CATA)n Simple_repeat Simple_repeat 4 128 0 2987 91 20 2 chr5 14950493 14950899 -184679251 - MLT2A2 LTR ERVL -40 413 1 450 322 142 24 chr5 14951420 14951879 -184678271 - L1M4 LINE L1 -3417 2729 2217 37 62 0 0 chr5 14951999 14952064 -184678086 + AT_rich Low_complexity Low_complexity 1 65 0 247 258 16 0 chr5 14952635 14952697 -184677453 + (TG)n Simple_repeat Simple_repeat 2 64 0 342 0 0 0 chr5 14953475 14953513 -184676637 + (CA)n Simple_repeat Simple_repeat 2 39 0 303 49 0 0 chr5 14953512 14953553 -184676597 + (TC)n Simple_repeat Simple_repeat 1 41 0 * 12905 159 44 8 chr5 14953553 14955878 -184674272 - Tigger1 DNA MER2_type -9 2409 1 486 290 50 35 chr5 14955878 14956161 -184673989 - L1MC4 LINE L1 -134 7908 7622 674 236 72 29 chr5 14957011 14957358 -184672792 - L1M4 LINE L1 -2598 4967 4606 1097 229 103 0 chr5 14957419 14957690 -184672460 + L1MC3 LINE L1 7027 7325 -460 649 249 5 11 chr5 14957689 14957878 -184672272 + L1MC3 LINE L1 7594 7781 -4 * 2318 124 21 0 chr5 14957915 14958293 -184671857 - L1PA13 LINE L1 -1 6162 5777 959 135 12 5 chr5 14958293 14958453 -184671697 + L1PA13 LINE L1 5607 5754 -409 208 367 65 43 chr5 14959353 14959492 -184670658 + MIR SINE MIR 8 149 -113 22 0 0 0 chr5 14959694 14959716 -184670434 + AT_rich Low_complexity Low_complexity 1 22 0 306 345 42 0 chr5 14959788 14959956 -184670194 - MLT1-int LTR MaLR -912 459 285 1567 174 36 0 chr5 14960309 14960584 -184669566 - AluJb SINE Alu -17 295 11 4893 235 49 10 chr5 14961396 14962745 -184667405 - L1M4 LINE L1 -5750 1815 22 306 0 0 0 chr5 14962784 14962818 -184667332 + (TA)n Simple_repeat Simple_repeat 2 35 0 216 0 0 0 chr5 14962819 14962843 -184667307 + (GA)n Simple_repeat Simple_repeat 1 24 0 297 277 118 30 chr5 14962843 14963139 -184667011 - L1MCc LINE L1 -4620 2502 2181 35 24 0 0 chr5 14963147 14963189 -184666961 + AT_rich Low_complexity Low_complexity 1 42 0 240 122 49 0 chr5 14963198 14963239 -184666911 - L1MA3 LINE L1 -23 6282 6240 1359 278 61 80 chr5 14963251 14964923 -184665227 - L1MCc LINE L1 -4897 1526 365 304 328 87 21 chr5 14965369 14965656 -184664494 - L1MCc LINE L1 -6100 323 18 204 40 0 0 chr5 14965878 14965903 -184664247 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5272 191 49 23 chr5 14966470 14967873 -184662277 - L1MCa LINE L1 -4413 2013 483 261 49 0 0 chr5 14967945 14967986 -184662164 + L1MA3 LINE L1 6265 6305 0 1647 245 55 39 chr5 14968004 14968493 -184661657 - L1MCa LINE L1 -5929 497 1 1094 277 19 60 chr5 14968584 14969014 -184661136 + MER92A LTR ERV1 1 412 0 280 377 29 0 chr5 14969259 14969397 -184660753 - MIR SINE MIR -115 147 6 403 240 10 0 chr5 14969957 14970053 -184660097 - FLAM_C SINE Alu -6 127 31 2267 133 55 38 chr5 14970056 14970279 -184659871 - MSTA LTR MaLR 0 428 193 2184 112 3 13 chr5 14970279 14970591 -184659559 - AluSx SINE Alu -3 309 1 2267 133 55 38 chr5 14970591 14970788 -184659362 - MSTA LTR MaLR -235 193 1 622 183 26 0 chr5 14971876 14971991 -184658159 - L1MC3 LINE L1 -1645 6140 6023 * 1157 215 102 50 chr5 14971984 14972762 -184657388 - L1MC3 LINE L1 -743 5403 4746 285 289 18 0 chr5 14972757 14972871 -184657279 - L1MC3 LINE L1 -1798 4348 4233 * 2128 232 40 8 chr5 14972881 14973540 -184656610 - L1 LINE L1 -2650 3496 2817 1630 161 3 31 chr5 14973558 14973876 -184656274 - AluSx SINE Alu 0 310 1 3509 249 44 46 chr5 14973876 14975071 -184655079 - L1M4 LINE L1 -1489 4657 3461 7579 27 3 7 chr5 14975071 14976417 -184653733 - L1PA4 LINE L1 0 6155 4810 3509 249 44 46 chr5 14976417 14976464 -184653686 - L1M4 LINE L1 -2685 3461 3415 2353 98 0 0 chr5 14976464 14976769 -184653381 + AluSc SINE Alu 3 307 -2 3509 249 44 46 chr5 14976769 14977163 -184652987 - L1M4 LINE L1 -2731 3415 3024 749 320 119 8 chr5 14977156 14977525 -184652625 - L1MCb LINE L1 -5430 615 206 * 5401 136 37 0 chr5 14977530 14978359 -184651791 - HERVL18 LTR ERVL -790 5257 4398 5571 173 1 2 chr5 14978365 14979228 -184650922 - HERVL18 LTR ERVL -2468 3579 2718 1418 137 11 2 chr5 14979225 14979496 -184650654 - HERVL18 LTR ERVL -3595 2452 2119 * 1133 188 17 10 chr5 14979495 14979852 -184650298 - HERVL18 LTR ERVL -4237 1810 1388 * 472 209 0 0 chr5 14979840 14979931 -184650219 - HERVL18 LTR ERVL -5086 961 871 * 3892 219 22 3 chr5 14979929 14980684 -184649466 - HERVL18 LTR ERVL -5277 770 1 681 254 136 55 chr5 14980690 14981020 -184649130 - LTR18A LTR ERVL 0 357 1 1027 269 86 35 chr5 14981159 14981587 -184648563 - MLT1D LTR MaLR -5 500 51 1568 179 152 16 chr5 14982237 14982611 -184647539 - MSTA LTR MaLR -3 425 1 283 313 16 55 chr5 14983452 14983580 -184646570 + L2 LINE L2 2737 2859 -455 566 268 98 16 chr5 14983580 14983774 -184646376 - MER63A DNA MER1_type 0 210 1 393 261 107 102 chr5 14983784 14983950 -184646200 + L2 LINE L2 2928 3092 -221 192 77 0 0 chr5 14983950 14983976 -184646174 + (CA)n Simple_repeat Simple_repeat 2 27 0 393 261 107 102 chr5 14983976 14984192 -184645958 + L2 LINE L2 3092 3312 -1 233 143 0 0 chr5 14985697 14985732 -184644418 - MSTB LTR MaLR -59 367 333 528 245 75 82 chr5 14985925 14986151 -184643999 + MLT1E2 LTR MaLR 1 199 -306 2482 56 3 3 chr5 14986308 14986627 -184643523 - L1PA7 LINE L1 -1 6153 5835 780 294 163 11 chr5 14986648 14986924 -184643226 + MLT1E2 LTR MaLR 302 619 -7 182 224 86 17 chr5 14987010 14987068 -184643082 - L2 LINE L2 -60 3253 3192 428 144 29 10 chr5 14988945 14989049 -184641101 + (TA)n Simple_repeat Simple_repeat 2 107 0 772 216 0 0 chr5 14990000 14990167 -184639983 + L1P LINE L1 3349 3515 -2631 2591 164 38 10 chr5 14990186 14990693 -184639457 + L1PA16 LINE L1 5646 6166 0 36670 95 10 3 chr5 14991548 14996537 -184633613 + HERVL LTR ERVL 626 5652 -2 2302 60 7 0 chr5 14997826 14998108 -184632042 - AluY SINE Alu -27 284 1 27 62 0 0 chr5 14998115 14998163 -184631987 + AT_rich Low_complexity Low_complexity 1 48 0 190 385 101 0 chr5 14998551 14998660 -184631490 - L3 LINE CR1 -417 1160 1041 852 234 155 33 chr5 14999173 14999625 -184630525 + Charlie4a DNA MER1_type 1 507 -1 2184 86 16 13 chr5 14999631 14999935 -184630215 + AluY SINE Alu 1 305 -6 4991 186 16 0 chr5 15000141 15001069 -184629081 - L1MC1 LINE L1 -5 6328 5386 263 189 0 0 chr5 15001082 15001135 -184629015 + Tigger1 DNA MER2_type 7 59 -2359 5648 91 23 9 chr5 15001135 15001428 -184628722 - L1PA10 LINE L1 -15 6153 5861 1419 228 48 70 chr5 15001428 15002329 -184627821 - L1MC3 LINE L1 -757 5389 4978 2123 115 3 3 chr5 15002626 15002921 -184627229 - AluSx SINE Alu -17 295 1 352 356 79 50 chr5 15004431 15005074 -184625076 + HERVL LTR ERVL 1454 2115 -3539 699 252 45 36 chr5 15005141 15005470 -184624680 - L1MC3 LINE L1 -1503 4643 4307 382 292 121 38 chr5 15005480 15005795 -184624355 - L1MC3 LINE L1 -2003 4143 3803 894 76 61 0 chr5 15006202 15006333 -184623817 - MER85 DNA T2_type 0 139 1 495 255 26 57 chr5 15006835 15007027 -184623123 + Ricksha DNA DNA 9 194 -1060 * 931 186 89 13 chr5 15006886 15007123 -184623027 - Ricksha DNA DNA -14 3237 2983 2489 154 39 25 chr5 15007123 15007558 -184622592 - Ricksha DNA DNA -1116 2130 1690 871 186 42 7 chr5 15007550 15007749 -184622401 - Ricksha DNA DNA -1107 147 1 * 1012 203 188 32 chr5 15008002 15008406 -184621744 + MLT1C LTR MaLR 1 467 0 306 125 0 0 chr5 15009003 15009051 -184621099 + (A)n Simple_repeat Simple_repeat 1 48 0 22 80 0 0 chr5 15009404 15009454 -184620696 + AT_rich Low_complexity Low_complexity 1 50 0 185 305 0 73 chr5 15011653 15011735 -184618415 + L3 LINE CR1 885 960 -617 1948 151 26 32 chr5 15012490 15012867 -184617283 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr5 15012878 15012899 -184617251 + AT_rich Low_complexity Low_complexity 1 21 0 1835 207 16 8 chr5 15013363 15013750 -184616400 + MLT1B LTR MaLR 1 390 0 24 53 0 0 chr5 15013811 15013849 -184616301 + AT_rich Low_complexity Low_complexity 1 38 0 425 238 50 38 chr5 15013915 15014075 -184616075 - MER46C DNA MER2_type -74 264 103 295 239 34 60 chr5 15015040 15015157 -184614993 - MER104 DNA Tc2 -47 133 20 1024 242 0 9 chr5 15016059 15016282 -184613868 - MER58A DNA MER1_type -1 223 3 21 36 0 0 chr5 15016722 15016750 -184613400 + AT_rich Low_complexity Low_complexity 1 28 0 2470 59 0 0 chr5 15016995 15017300 -184612850 - AluY SINE Alu -6 305 1 312 270 117 55 chr5 15017396 15017559 -184612591 - MIR SINE MIR -50 212 40 33 25 0 0 chr5 15017662 15017702 -184612448 + AT_rich Low_complexity Low_complexity 1 40 0 6226 137 36 3 chr5 15017953 15018960 -184611190 + Tigger2 DNA MER2_type 1676 2715 -3 1407 237 106 3 chr5 15022630 15022988 -184607162 - MSTD LTR MaLR 0 396 2 1408 160 109 37 chr5 15023314 15023664 -184606486 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr5 15023775 15023796 -184606354 + AT_rich Low_complexity Low_complexity 1 21 0 387 313 61 30 chr5 15024155 15024353 -184605797 + MLT1H LTR MaLR 5 208 -341 410 284 15 8 chr5 15025223 15025279 -184604871 - MLT1E3 LTR MaLR 0 624 570 1561 101 4 40 chr5 15025279 15025543 -184604607 + AluSp SINE Alu 65 320 0 410 284 15 8 chr5 15025543 15025619 -184604531 - MLT1E3 LTR MaLR -54 570 490 5485 90 19 3 chr5 15025619 15026365 -184603785 - HERVL LTR ERVL -3248 2406 1649 833 184 74 23 chr5 15026755 15026972 -184603178 - L1ME LINE L1 -614 5548 5321 1732 282 52 16 chr5 15026988 15027817 -184602333 - L1ME LINE L1 -907 5239 4381 332 281 116 14 chr5 15028078 15028224 -184601926 + MLT1H LTR MaLR 382 542 -7 21 0 0 0 chr5 15028555 15028576 -184601574 + AT_rich Low_complexity Low_complexity 1 21 0 185 371 126 0 chr5 15028784 15028951 -184601199 - L2 LINE L2 -672 2642 2455 1884 114 53 23 chr5 15030034 15030333 -184599817 - AluSg SINE Alu 0 310 3 185 196 18 0 chr5 15030663 15030719 -184599431 + CT-rich Low_complexity Low_complexity 2 58 0 23 33 0 0 chr5 15031074 15031104 -184599046 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr5 15032314 15032345 -184597805 + AT_rich Low_complexity Low_complexity 1 31 0 587 313 100 42 chr5 15032604 15033013 -184597137 - L2 LINE L2 0 3313 2881 48 67 0 0 chr5 15033302 15033392 -184596758 + AT_rich Low_complexity Low_complexity 1 90 0 302 115 19 0 chr5 15033558 15033610 -184596540 + GA-rich Low_complexity Low_complexity 4 56 0 856 259 87 54 chr5 15034404 15034851 -184595299 - MLT1C LTR MaLR 0 467 6 360 260 16 16 chr5 15036632 15036755 -184593395 + LTR33 LTR ERVL 392 514 -7 1411 172 23 23 chr5 15037427 15037729 -184592421 + L1PA12 LINE L1 5858 6159 -9 31 0 0 0 chr5 15038469 15038500 -184591650 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 15038576 15038597 -184591553 + AT_rich Low_complexity Low_complexity 1 21 0 273 146 0 0 chr5 15038647 15038695 -184591455 + (CA)n Simple_repeat Simple_repeat 1 48 0 229 239 37 18 chr5 15038737 15038846 -184591304 + (TA)n Simple_repeat Simple_repeat 1 111 0 1204 184 31 0 chr5 15039293 15039516 -184590634 + AluJb SINE Alu 1 230 -82 22 56 0 0 chr5 15040538 15040574 -184589576 + AT_rich Low_complexity Low_complexity 1 36 0 1775 275 65 27 chr5 15042067 15042623 -184587527 + MLT1E LTR MaLR 10 586 -7 1059 293 48 6 chr5 15042628 15043095 -184587055 + MLT1E-int LTR MaLR 1 606 -765 324 310 47 35 chr5 15043342 15043513 -184586637 + MLT1E-int LTR MaLR 711 883 -488 394 284 97 94 chr5 15043650 15043992 -184586158 + MLT1E-int LTR MaLR 985 1327 -44 381 284 28 37 chr5 15044119 15044228 -184585922 + MLT1E LTR MaLR 45 152 -441 297 197 0 0 chr5 15046647 15046718 -184583432 + GA-rich Low_complexity Low_complexity 1 71 0 1507 186 68 22 chr5 15046728 15047050 -184583100 - MER1B DNA MER1_type 0 337 1 297 0 0 0 chr5 15047157 15047190 -184582960 + (CA)n Simple_repeat Simple_repeat 1 33 0 381 58 0 0 chr5 15047420 15047472 -184582678 + (TG)n Simple_repeat Simple_repeat 2 53 0 278 270 95 16 chr5 15048179 15048305 -184581845 + MIR SINE MIR 75 210 -52 1883 27 0 0 chr5 15048453 15048673 -184581477 - L1PA3 LINE L1 -1949 4197 3978 9789 28 8 0 chr5 15048674 15050612 -184579538 + L1PA3 LINE L1 4211 6155 0 3322 156 52 17 chr5 15050612 15051240 -184578910 + L1PB4 LINE L1 5484 6140 -16 1209 283 120 25 chr5 15051349 15052184 -184577966 - L1ME3A LINE L1 -86 6084 5173 860 272 16 10 chr5 15052399 15052711 -184577439 - L1ME3A LINE L1 -1367 4779 4466 22 35 0 0 chr5 15052745 15052774 -184577376 + AT_rich Low_complexity Low_complexity 1 29 0 1042 207 82 28 chr5 15052789 15053085 -184577065 - L1MB8 LINE L1 -12 6166 5848 271 344 48 0 chr5 15053788 15053913 -184576237 + L2 LINE L2 3179 3309 -4 22 0 0 0 chr5 15054279 15054301 -184575849 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 15054796 15054821 -184575329 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 15055593 15055614 -184574536 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr5 15055853 15055876 -184574274 + (A)n Simple_repeat Simple_repeat 1 23 0 362 341 114 26 chr5 15056610 15056918 -184573232 + MLT1I LTR MaLR 1 335 -74 25 0 0 0 chr5 15057064 15057089 -184573061 + AT_rich Low_complexity Low_complexity 1 25 0 528 190 72 138 chr5 15057404 15057532 -184572618 + MER20 DNA MER1_type 38 150 -69 477 0 0 0 chr5 15057532 15057585 -184572565 + (CA)n Simple_repeat Simple_repeat 1 53 0 528 190 72 138 chr5 15057585 15057651 -184572499 + MER20 DNA MER1_type 150 219 0 1868 112 42 14 chr5 15057942 15058229 -184571921 + AluSx SINE Alu 1 295 -17 305 375 33 25 chr5 15058653 15058896 -184571254 - L2 LINE L2 -869 2445 2201 * 707 284 28 14 chr5 15058888 15059106 -184571044 - MIR SINE MIR -2 260 40 1484 242 14 16 chr5 15059672 15060036 -184570114 - MLT1A1 LTR MaLR -2 363 1 21 36 0 0 chr5 15060084 15060112 -184570038 + AT_rich Low_complexity Low_complexity 1 28 0 423 0 0 0 chr5 15060793 15060840 -184569310 + (CA)n Simple_repeat Simple_repeat 2 48 0 218 284 204 0 chr5 15063112 15063200 -184566950 - L2 LINE L2 0 3313 3208 245 167 15 76 chr5 15063392 15063458 -184566692 - L1MCa LINE L1 -5720 844 783 204 231 19 0 chr5 15063541 15063593 -184566557 + T-rich Low_complexity Low_complexity 2 54 0 1244 264 82 23 chr5 15063596 15064111 -184566039 - L1MCa LINE L1 -5493 552 8 7547 202 41 5 chr5 15065563 15068185 -184561965 + L1PA16 LINE L1 3437 6153 -13 51 0 0 0 chr5 15068185 15068236 -184561914 + AT_rich Low_complexity Low_complexity 1 51 0 221 270 10 0 chr5 15068576 15068676 -184561474 + GA-rich Low_complexity Low_complexity 4 104 0 1983 261 83 26 chr5 15068709 15069564 -184560586 - L1M4 LINE L1 -5034 1821 908 231 205 154 0 chr5 15069576 15069654 -184560496 - L1M4 LINE L1 -6664 195 106 584 282 143 18 chr5 15069763 15070331 -184559819 + L1ME1 LINE L1 3898 4536 -1610 5317 118 2 2 chr5 15070336 15071941 -184558209 - L1PA13 LINE L1 -4 6159 4533 1786 258 105 37 chr5 15072186 15072202 -184557948 + L1ME1 LINE L1 4979 4992 -1172 198 118 0 0 chr5 15072202 15072236 -184557914 + (CA)n Simple_repeat Simple_repeat 2 35 0 1786 258 105 37 chr5 15072236 15073304 -184556846 + L1ME1 LINE L1 4992 6152 -12 2048 122 0 34 chr5 15073435 15073756 -184556394 - AluSg SINE Alu 0 310 1 322 262 0 47 chr5 15073955 15074045 -184556105 + T-rich Low_complexity Low_complexity 3 85 -59 1567 112 23 11 chr5 15074045 15074305 -184555845 - L1MA1 LINE L1 0 6302 6040 322 262 0 47 chr5 15074305 15074363 -184555787 + T-rich Low_complexity Low_complexity 85 144 0 1460 196 31 78 chr5 15074508 15074891 -184555259 - MLT1A1 LTR MaLR 0 365 1 2272 70 0 7 chr5 15075907 15076206 -184553944 + AluY SINE Alu 1 297 -14 34 55 0 0 chr5 15077655 15077710 -184552440 + AT_rich Low_complexity Low_complexity 1 55 0 11755 161 41 47 chr5 15080265 15081819 -184548331 + Tigger1 DNA MER2_type 1 1535 -883 2291 93 3 0 chr5 15081819 15082121 -184548029 + AluSx SINE Alu 1 303 -9 11755 161 41 47 chr5 15082121 15083000 -184547150 + Tigger1 DNA MER2_type 1535 2418 0 282 286 148 39 chr5 15083352 15083555 -184546595 - MLT1F LTR MaLR -298 244 20 1712 126 43 22 chr5 15085008 15085285 -184544865 + AluSq SINE Alu 1 283 -30 314 109 36 0 chr5 15085285 15085340 -184544810 + GA-rich Low_complexity Low_complexity 2 58 0 271 289 0 0 chr5 15085349 15085438 -184544712 + (CTGGGG)n Simple_repeat Simple_repeat 1 89 0 24 75 0 0 chr5 15085601 15085641 -184544509 + GC_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr5 15088341 15088362 -184541788 + AT_rich Low_complexity Low_complexity 1 21 0 213 152 43 0 chr5 15088780 15088826 -184541324 + (CA)n Simple_repeat Simple_repeat 1 48 0 2076 117 10 0 chr5 15089321 15089620 -184540530 - AluSp SINE Alu -11 302 1 21 0 0 0 chr5 15089673 15089694 -184540456 + AT_rich Low_complexity Low_complexity 1 21 0 3767 234 84 17 chr5 15090905 15092286 -184537864 + L1MC3 LINE L1 4385 5024 -1122 306 0 0 0 chr5 15092286 15092320 -184537830 + (TG)n Simple_repeat Simple_repeat 2 35 0 3767 234 84 17 chr5 15092320 15092723 -184537427 + L1MC3 LINE L1 5024 5398 -748 4030 236 43 27 chr5 15092740 15093854 -184536296 + L1MC3 LINE L1 6452 7546 -239 2374 81 7 0 chr5 15093854 15094163 -184535987 + AluY SINE Alu 1 311 0 4030 236 43 27 chr5 15094163 15094227 -184535923 + L1MC3 LINE L1 7546 7607 -178 1220 163 42 102 chr5 15094227 15094588 -184535562 - MER44D DNA MER2_type 0 609 1 4030 236 43 27 chr5 15094588 15094663 -184535487 + L1MC3 LINE L1 7607 7733 -52 632 208 0 11 chr5 15094663 15094799 -184535351 + MLT1A1 LTR MaLR 8 126 -239 11398 208 44 23 chr5 15094989 15098250 -184531900 + L1M1 LINE L1 2233 5562 -743 487 133 89 0 chr5 15098410 15098500 -184531650 + MER4A LTR ERV1 1 98 -566 1624 134 22 76 chr5 15098500 15098865 -184531285 + MER4A LTR ERV1 261 664 0 241 156 22 0 chr5 15099050 15099095 -184531055 - MLT2B1 LTR ERVL 0 464 419 1389 213 94 2 chr5 15099176 15099549 -184530601 - MLT2B1 LTR ERVL -56 459 1 1582 188 0 17 chr5 15099656 15099954 -184530196 - MER4A LTR ERV1 0 664 372 439 125 42 31 chr5 15100003 15100099 -184530051 - MER4A LTR ERV1 -567 97 1 354 293 78 53 chr5 15100176 15100459 -184529691 + L1M4 LINE L1 3086 3375 -2771 278 280 223 24 chr5 15100815 15101026 -184529124 - LTR16A1 LTR ERVL -7 450 198 1766 135 55 50 chr5 15101706 15102068 -184528082 - THE1B LTR MaLR 0 364 1 11744 102 4 0 chr5 15102068 15103642 -184526508 - THE1B-int LTR MaLR 0 1580 1 1742 138 92 43 chr5 15103642 15103989 -184526161 - THE1B LTR MaLR 0 364 1 2011 248 68 22 chr5 15104164 15104850 -184525300 + MER50 LTR ERV1 11 728 -6 2514 156 2 5 chr5 15155022 15155427 -184474723 + MSTB-int LTR MaLR 1248 1651 0 943 219 55 48 chr5 15155427 15155719 -184474431 + MSTB LTR MaLR 1 294 -132 319 372 11 27 chr5 15156001 15156184 -184473966 + MER5A DNA MER1_type 7 186 -3 287 276 98 57 chr5 15156596 15156773 -184473377 - MIR3 SINE MIR -62 200 14 29 28 0 0 chr5 15156976 15157012 -184473138 + AT_rich Low_complexity Low_complexity 1 36 0 5028 67 6 0 chr5 15157113 15157767 -184472383 + L1PA7 LINE L1 5497 6154 0 297 219 0 0 chr5 15158178 15158242 -184471908 + MLT1A2 LTR MaLR 309 372 -2 315 0 0 0 chr5 15158405 15158440 -184471710 + (TG)n Simple_repeat Simple_repeat 2 36 0 2657 113 0 3 chr5 15159304 15159676 -184470474 + THE1C LTR MaLR 5 375 0 21 36 0 0 chr5 15160274 15160302 -184469848 + AT_rich Low_complexity Low_complexity 1 28 0 249 172 0 0 chr5 15161151 15161215 -184468935 + (TA)n Simple_repeat Simple_repeat 1 64 0 685 258 31 0 chr5 15162011 15162174 -184467976 - MER5A DNA MER1_type -6 183 16 399 138 11 32 chr5 15162681 15162775 -184467375 + GA-rich Low_complexity Low_complexity 2 93 0 673 282 7 0 chr5 15162866 15163015 -184467135 + MER45A DNA AcHobo 1 150 -28 1760 174 7 0 chr5 15164096 15164390 -184465760 - AluSx SINE Alu -14 298 3 376 347 67 0 chr5 15164519 15164712 -184465438 + MIR SINE MIR 31 236 -26 234 375 42 0 chr5 15165058 15165202 -184464948 - MIR3 SINE MIR -18 190 41 319 309 0 0 chr5 15165758 15165852 -184464298 + (TA)n Simple_repeat Simple_repeat 2 95 0 35 41 0 0 chr5 15165890 15165939 -184464211 + AT_rich Low_complexity Low_complexity 1 49 0 319 351 34 55 chr5 15166705 15166998 -184463152 + L2 LINE L2 2665 2950 -363 665 273 126 14 chr5 15167901 15168194 -184461956 + L1MC4a LINE L1 5591 5916 -1892 25 51 0 0 chr5 15168272 15168311 -184461839 + AT_rich Low_complexity Low_complexity 1 39 0 6584 79 14 0 chr5 15168459 15169771 -184460379 + L1PA8 LINE L1 4838 6169 -3 2848 202 66 28 chr5 15169895 15171416 -184458734 - L1MA9 LINE L1 -10 6302 4548 393 291 10 15 chr5 15171396 15171602 -184458548 + L1 LINE L1 3024 3228 -4337 * 5079 188 15 19 chr5 15171604 15172320 -184457830 + L1 LINE L1 4873 5585 -1980 2301 101 0 3 chr5 15172320 15172628 -184457522 + AluY SINE Alu 1 307 -4 5079 188 15 19 chr5 15172628 15173031 -184457119 + L1 LINE L1 5585 5988 -1577 2010 143 3 3 chr5 15173039 15173340 -184456810 - AluSq SINE Alu -12 301 1 4998 71 27 1 chr5 15174292 15174969 -184455181 + L1PA8 LINE L1 5465 6158 -14 2925 227 72 38 chr5 15175144 15176050 -184454100 - Charlie1 DNA MER1_type -199 2562 1626 2126 131 3 10 chr5 15176621 15176935 -184453215 - AluSx SINE Alu 0 312 1 25 31 0 0 chr5 15178451 15178483 -184451667 + AT_rich Low_complexity Low_complexity 1 32 0 202 203 43 14 chr5 15178947 15179016 -184451134 + (AAATG)n Simple_repeat Simple_repeat 4 74 0 832 221 169 66 chr5 15179296 15179654 -184450496 + MER50 LTR ERV1 10 439 -295 3223 111 47 12 chr5 15179654 15180148 -184450002 - MER9 LTR ERVK 0 511 1 832 221 169 66 chr5 15180148 15180305 -184449845 + MER50 LTR ERV1 439 578 -156 4352 31 4 0 chr5 15180346 15180864 -184449286 - L1PA3 LINE L1 0 6155 5636 4750 18 0 5 chr5 15180864 15181650 -184448500 + L1PA3 LINE L1 4825 5608 -547 856 204 0 0 chr5 15181651 15181813 -184448337 + MER50 LTR ERV1 573 734 0 2350 178 18 7 chr5 15182015 15182471 -184447679 + LOR1b LTR ERV1 1 461 0 22 56 0 0 chr5 15182581 15182617 -184447533 + AT_rich Low_complexity Low_complexity 1 36 0 307 336 18 0 chr5 15183143 15183256 -184446894 + (TG)n Simple_repeat Simple_repeat 2 116 0 1981 193 49 27 chr5 15183369 15183719 -184446431 - LOR1b LTR ERV1 -1 460 96 1989 140 3 0 chr5 15183719 15184012 -184446138 + AluSx SINE Alu 17 310 -2 1981 193 49 27 chr5 15184012 15184111 -184446039 - LOR1b LTR ERV1 -365 96 1 3404 21 9 17 chr5 15184450 15184869 -184445281 - L1PA3 LINE L1 -3 6152 5737 184 339 0 0 chr5 15186697 15186756 -184443394 + L2 LINE L2 3180 3238 -75 1873 202 77 7 chr5 15186879 15187294 -184442856 + MSTB2 LTR MaLR 14 457 0 207 0 0 0 chr5 15188516 15188539 -184441611 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 225 0 0 0 chr5 15188812 15188837 -184441313 + (TG)n Simple_repeat Simple_repeat 2 26 0 350 327 119 0 chr5 15189871 15190030 -184440120 - MIR SINE MIR 0 262 85 252 376 12 0 chr5 15190233 15190318 -184439832 + MLT1I LTR MaLR 223 308 -101 524 261 94 108 chr5 15190424 15190861 -184439289 - LTR16A LTR ERVL -3 447 17 528 338 40 15 chr5 15191186 15191387 -184438763 - LTR16A LTR ERVL -162 288 83 13900 74 6 3 chr5 15191470 15193251 -184436899 - HERVL-A1 LTR ERVL -3867 1787 1 2848 101 47 7 chr5 15193251 15193291 -184436859 - MLT2A1 LTR ERVL 0 444 407 486 88 0 0 chr5 15193291 15193359 -184436791 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 2848 101 47 7 chr5 15193359 15193745 -184436405 - MLT2A1 LTR ERVL -37 407 1 225 0 0 0 chr5 15194441 15194466 -184435684 + (TG)n Simple_repeat Simple_repeat 2 26 0 213 269 0 11 chr5 15194996 15195089 -184435061 + T-rich Low_complexity Low_complexity 5 96 0 8319 121 12 7 chr5 15195210 15196516 -184433634 - L1PA8A LINE L1 -1205 4941 3629 6174 95 3 1 chr5 15196516 15197696 -184432454 + L1PA8A LINE L1 4949 6127 -4 215 227 34 11 chr5 15197699 15197787 -184432363 + (TA)n Simple_repeat Simple_repeat 2 91 0 306 0 0 0 chr5 15197804 15197838 -184432312 + (TA)n Simple_repeat Simple_repeat 1 34 0 28 0 0 0 chr5 15198528 15198556 -184431594 + AT_rich Low_complexity Low_complexity 1 28 0 2332 92 7 0 chr5 15199404 15199710 -184430440 - AluSq SINE Alu -5 308 1 254 254 0 0 chr5 15199946 15200001 -184430149 + MLT1J LTR MaLR 110 164 -347 2021 97 0 71 chr5 15200120 15200431 -184429719 + AluSx SINE Alu 1 289 -23 262 239 28 0 chr5 15200656 15200727 -184429423 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 322 342 10 1 chr5 15200742 15200865 -184429285 + MIR SINE MIR 21 143 -65 2098 134 7 0 chr5 15201965 15202271 -184427879 - AluSc SINE Alu -1 308 1 2416 75 0 0 chr5 15202352 15202644 -184427506 + AluY SINE Alu 1 292 -19 339 150 0 0 chr5 15203187 15203247 -184426903 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 1223 212 43 11 chr5 15203506 15203784 -184426366 + MER90 LTR ERV1 328 614 0 2906 248 57 79 chr5 15204642 15205526 -184424624 - L1M4 LINE L1 -1328 4818 3991 314 22 0 65 chr5 15205526 15205572 -184424578 - L1PA12 LINE L1 -10 6158 6116 2906 248 57 79 chr5 15205572 15206441 -184423709 - L1M4 LINE L1 -2155 3991 3104 182 318 11 80 chr5 15207987 15208075 -184422075 + L2 LINE L2 3181 3262 -10 22 0 0 0 chr5 15208176 15208198 -184421952 + AT_rich Low_complexity Low_complexity 1 22 0 220 286 32 0 chr5 15209059 15209122 -184421028 - L2 LINE L2 -7 3306 3242 369 0 0 0 chr5 15209211 15209226 -184420924 + (TG)n Simple_repeat Simple_repeat 1 56 0 369 0 0 0 chr5 15209226 15209267 -184420883 + (TG)n Simple_repeat Simple_repeat 2 42 0 2413 160 2 5 chr5 15209373 15209773 -184420377 - Tigger2 DNA MER2_type -53 2665 2267 355 246 0 0 chr5 15209757 15209826 -184420324 - Tigger2 DNA MER2_type -2649 69 1 * 362 338 113 42 chr5 15209862 15210241 -184419909 - L2 LINE L2 -2071 1243 838 1530 179 71 15 chr5 15211947 15212271 -184417879 - L1M3 LINE L1 -524 5810 5469 * 1630 182 119 7 chr5 15212269 15212682 -184417468 + L1MA10 LINE L1 5873 6331 -3 685 295 48 0 chr5 15212730 15212937 -184417213 + MIR SINE MIR 15 231 -31 844 251 4 39 chr5 15213152 15213383 -184416767 - MER58A DNA MER1_type -1 223 1 225 263 0 0 chr5 15214948 15215005 -184415145 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 529 287 113 12 chr5 15215880 15216082 -184414068 + MER5C DNA MER1_type 1 234 -90 3731 171 24 19 chr5 15216082 15216837 -184413313 - L1MA9 LINE L1 -13 6299 5541 529 287 113 12 chr5 15216837 15216881 -184413269 + MER5C DNA MER1_type 234 272 -52 318 67 0 0 chr5 15216885 15216930 -184413220 + (CA)n Simple_repeat Simple_repeat 1 45 0 366 42 0 0 chr5 15217741 15217789 -184412361 + (CA)n Simple_repeat Simple_repeat 1 48 0 22 0 0 0 chr5 15218052 15218074 -184412076 + AT_rich Low_complexity Low_complexity 1 22 0 582 78 0 0 chr5 15218590 15218667 -184411483 + MADE1 DNA Mariner 1 77 -3 180 77 0 0 chr5 15219462 15219488 -184410662 + (CACCAT)n Simple_repeat Simple_repeat 2 27 0 25 90 0 0 chr5 15220061 15220128 -184410022 + AT_rich Low_complexity Low_complexity 1 67 0 589 302 94 47 chr5 15220937 15221321 -184408829 + MLT1I LTR MaLR 8 409 0 335 195 0 58 chr5 15223108 15223195 -184406955 - MER53 DNA DNA -85 104 23 * 402 178 0 56 chr5 15223117 15223207 -184406943 + MER53 DNA DNA 105 189 0 250 320 88 7 chr5 15224703 15224850 -184405300 - MIR SINE MIR -57 205 47 881 232 45 114 chr5 15225026 15225123 -184405027 + MLT1A1 LTR MaLR 3 105 -321 3136 166 103 3 chr5 15225123 15225775 -184404375 + LTR62 LTR ERVK 1 717 -2 881 232 45 114 chr5 15225775 15226070 -184404080 + MLT1A1 LTR MaLR 105 426 0 300 371 53 50 chr5 15226096 15226433 -184403717 + L2 LINE L2 2480 2817 -497 304 77 39 0 chr5 15226517 15226569 -184403581 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 205 148 19 19 chr5 15226712 15226766 -184403384 + CT-rich Low_complexity Low_complexity 4 57 0 1679 171 52 3 chr5 15227064 15227392 -184402758 - L1PB4 LINE L1 0 6156 5813 514 292 67 54 chr5 15227519 15227817 -184402333 - MLT1I LTR MaLR -29 380 79 285 272 37 12 chr5 15227970 15228051 -184402099 + L2 LINE L2 3186 3268 -4 288 91 0 0 chr5 15230147 15230191 -184399959 + (CA)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr5 15230265 15230286 -184399864 + AT_rich Low_complexity Low_complexity 1 21 0 403 301 82 0 chr5 15232597 15232743 -184397407 + LTR16C LTR ERVL 108 265 -226 849 260 18 18 chr5 15232747 15232974 -184397176 - AluJo SINE Alu -16 296 70 2230 148 41 24 chr5 15235388 15235807 -184394343 - MSTA LTR MaLR -2 426 1 628 316 92 25 chr5 15236428 15236786 -184393364 - MLT1K LTR MaLR -27 561 180 288 0 0 0 chr5 15236786 15236818 -184393332 + (T)n Simple_repeat Simple_repeat 1 32 0 930 247 37 15 chr5 15237444 15237772 -184392378 - LTR37A LTR ERV1 -3 423 89 308 268 76 0 chr5 15239238 15239404 -184390746 + L1P LINE L1 3739 3920 -2226 376 61 0 0 chr5 15239514 15239563 -184390587 + MLT2A1 LTR ERVL 1 49 -404 1550 104 0 9 chr5 15239564 15239785 -184390365 + MLT2A1 LTR ERVL 219 437 -7 41269 84 23 7 chr5 15239786 15245348 -184384802 + HERVL-A1-A1 LTR ERVL 1 5654 0 2918 90 0 5 chr5 15245348 15245736 -184384414 + MLT2A1 LTR ERVL 1 386 -58 1616 143 122 31 chr5 15245736 15246057 -184384093 - THE1B LTR MaLR 0 364 15 10768 103 13 2 chr5 15246059 15247622 -184382528 - THE1B-int LTR MaLR 0 1580 1 504 109 0 87 chr5 15247622 15247714 -184382436 - THE1B LTR MaLR 0 355 272 257 121 61 91 chr5 15247712 15247778 -184382372 + MLT2B1 LTR ERVL 390 520 0 * 239 288 194 22 chr5 15247860 15248277 -184381873 - L1M4 LINE L1 -1544 4602 4114 456 174 37 9 chr5 15248315 15248424 -184381726 - L1MB7 LINE L1 0 6184 6073 462 275 66 60 chr5 15248431 15248575 -184381575 + L1ME LINE L1 5129 5271 -899 1905 153 27 0 chr5 15248575 15248870 -184381280 + AluSx SINE Alu 1 303 -9 462 275 66 60 chr5 15248870 15249073 -184381077 + L1ME LINE L1 5271 5481 -689 262 188 145 42 chr5 15249248 15249379 -184380771 + L1ME LINE L1 5725 5865 -305 206 345 25 50 chr5 15249673 15249792 -184380358 - MIR3 SINE MIR -84 124 9 237 254 0 14 chr5 15250773 15250844 -184379306 + L1MC4 LINE L1 7960 8029 -13 581 292 135 22 chr5 15250946 15251436 -184378714 - L1MC4 LINE L1 -424 7618 7074 26 50 0 0 chr5 15251826 15251866 -184378284 + AT_rich Low_complexity Low_complexity 1 40 0 2418 161 25 0 chr5 15252259 15252705 -184377445 + L1MA4 LINE L1 5838 6294 -6 247 318 123 53 chr5 15252875 15253045 -184377105 - MIR SINE MIR -47 215 34 4546 19 0 2 chr5 15254088 15254665 -184375485 + L1PA2 LINE L1 5619 6194 0 21 0 0 0 chr5 15255868 15255889 -184374261 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 15256081 15256109 -184374041 + AT_rich Low_complexity Low_complexity 1 28 0 270 371 62 65 chr5 15257444 15257797 -184372353 - L2 LINE L2 -5 3267 2916 220 321 101 34 chr5 15257844 15258081 -184372069 + L2 LINE L2 1472 1724 -1590 258 370 47 30 chr5 15258086 15258321 -184371829 - L2 LINE L2 -527 2787 2549 219 69 0 0 chr5 15258910 15258939 -184371211 + (CA)n Simple_repeat Simple_repeat 2 30 0 180 299 143 48 chr5 15259052 15259199 -184370951 + MIR3 SINE MIR 48 208 0 553 286 132 12 chr5 15259351 15259725 -184370425 - LTR16C LTR ERVL -10 481 33 249 196 0 0 chr5 15260850 15260901 -184369249 + (TG)n Simple_repeat Simple_repeat 1 51 0 304 326 0 22 chr5 15260901 15260993 -184369157 - L1MC4 LINE L1 -1340 6702 6613 305 143 111 0 chr5 15260916 15260979 -184369171 + L1MCa LINE L1 1995 2064 -4362 1299 238 79 9 chr5 15261037 15261378 -184368772 + MLT1A1 LTR MaLR 1 365 0 6456 210 83 34 chr5 15261378 15263033 -184367117 + MLT1A1-int LTR MaLR 1 1735 0 1118 261 64 3 chr5 15263033 15263327 -184366823 + MLT1A1 LTR MaLR 1 312 -53 2809 134 7 0 chr5 15263327 15263753 -184366397 + MER57B LTR ERV1 1 429 -5 359 158 0 0 chr5 15263758 15263815 -184366335 + MLT1A1 LTR MaLR 309 365 0 284 257 43 0 chr5 15263815 15263884 -184366266 + MLT1C LTR MaLR 84 155 -350 568 262 41 7 chr5 15263943 15264088 -184366062 + MLT1C LTR MaLR 318 467 0 1175 222 56 56 chr5 15264425 15264799 -184365351 - MLT1A2 LTR MaLR 0 374 1 26 30 0 0 chr5 15265592 15265625 -184364525 + AT_rich Low_complexity Low_complexity 1 33 0 366 168 69 59 chr5 15265735 15265836 -184364314 + MLT1A1 LTR MaLR 27 128 -377 * 1218 207 16 43 chr5 15265816 15266121 -184364029 + MLT1D LTR MaLR 209 505 0 891 178 35 11 chr5 15266271 15266445 -184363705 + L1MA2 LINE L1 16 193 -7372 * 11767 177 51 9 chr5 15266429 15269046 -184361104 + L1MA2 LINE L1 4025 6819 -904 262 67 44 0 chr5 15269046 15269091 -184361059 + (CTAAT)n Simple_repeat Simple_repeat 3 49 0 11767 177 51 9 chr5 15269091 15270033 -184360117 + L1MA2 LINE L1 6819 7720 -3 2253 109 0 0 chr5 15270054 15270357 -184359793 + AluSg SINE Alu 1 303 -7 242 164 18 0 chr5 15272364 15272419 -184357731 + (TA)n Simple_repeat Simple_repeat 1 56 0 1985 152 3 0 chr5 15273707 15274004 -184356146 + AluJb SINE Alu 1 298 -14 451 294 78 65 chr5 15274441 15274615 -184355535 + HAL1 LINE L1 1810 1980 -527 1908 224 32 60 chr5 15274615 15275182 -184354968 - MLT2B3 LTR ERVL 0 554 4 451 294 78 65 chr5 15275182 15275391 -184354759 + HAL1 LINE L1 1980 2198 -309 1986 321 37 11 chr5 15275920 15276668 -184353482 - ERVL LTR ERVL -2956 2808 2041 1763 237 63 83 chr5 15276891 15277866 -184352284 - L1M LINE L1 -749 5397 4460 190 342 13 25 chr5 15277996 15278075 -184352075 - MIR3 SINE MIR -32 176 99 397 276 152 69 chr5 15278382 15279052 -184351098 - LTR41 LTR ERVL -47 726 1 201 292 83 0 chr5 15279360 15279432 -184350718 + L2 LINE L2 1561 1638 -1676 2510 309 78 40 chr5 15279444 15280486 -184349664 + L2 LINE L2 1772 2864 -449 1726 246 52 6 chr5 15280486 15280969 -184349181 - MLT1D LTR MaLR 0 505 1 2510 309 78 40 chr5 15280969 15281099 -184349051 + L2 LINE L2 2864 2988 -325 21 0 0 0 chr5 15331388 15331409 -184298741 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 15331542 15331577 -184298573 + AT_rich Low_complexity Low_complexity 1 35 0 1865 87 48 84 chr5 15331709 15332018 -184298132 + AluSx SINE Alu 1 298 -14 3394 183 77 8 chr5 15332948 15333737 -184296413 - L1 LINE L1 -1293 5915 5072 1115 279 16 32 chr5 15333736 15334175 -184295975 - L1 LINE L1 -5146 2063 1621 * 3982 233 41 11 chr5 15334177 15335365 -184294785 - L1 LINE L1 -813 5569 4346 740 223 28 107 chr5 15335500 15335597 -184294553 - L1 LINE L1 -4283 2100 1997 2602 105 0 21 chr5 15335597 15335969 -184294181 + THE1B LTR MaLR 1 364 0 740 223 28 107 chr5 15335969 15336227 -184293923 - L1 LINE L1 -4386 1997 1371 312 155 0 0 chr5 15336280 15336351 -184293799 + GA-rich Low_complexity Low_complexity 2 72 0 207 0 0 0 chr5 15336381 15336404 -184293746 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 657 333 46 11 chr5 15337195 15337567 -184292583 + MLT1I LTR MaLR 15 399 -10 22 35 0 0 chr5 15337571 15337600 -184292550 + AT_rich Low_complexity Low_complexity 1 29 0 243 103 0 0 chr5 15337607 15337646 -184292504 + (T)n Simple_repeat Simple_repeat 1 39 0 5778 84 12 24 chr5 15337646 15338468 -184291682 - L1PA11 LINE L1 0 6174 5363 1914 186 63 32 chr5 15338494 15338957 -184291193 - L1MC2 LINE L1 -10 6334 5858 216 97 0 0 chr5 15339106 15339137 -184291013 + (TAGA)n Simple_repeat Simple_repeat 2 32 0 3097 145 30 0 chr5 15339143 15339720 -184290430 - L1P5 LINE L1 -381 5773 5184 1980 139 3 15 chr5 15339721 15340058 -184290092 - L1PA13 LINE L1 0 6163 5831 2001 172 5 3 chr5 15340059 15340432 -184289718 + L1P LINE L1 4795 5168 -978 1102 221 31 3 chr5 15340428 15340754 -184289396 - L1P5 LINE L1 -953 5193 4844 * 277 200 0 0 chr5 15340754 15340809 -184289341 + MSTD LTR MaLR 329 383 -13 21 0 0 0 chr5 15340850 15340871 -184289279 + AT_rich Low_complexity Low_complexity 1 21 0 220 349 173 34 chr5 15341273 15341806 -184288344 - L2 LINE L2 -1066 2248 1642 2266 235 113 33 chr5 15342041 15342825 -184287325 - L1ME1 LINE L1 -5 6161 5315 287 262 134 55 chr5 15342860 15343024 -184287126 - L1MD2 LINE L1 -172 6187 6011 299 294 28 14 chr5 15343080 15343223 -184286927 - L1ME1 LINE L1 -1022 5124 4980 989 264 56 56 chr5 15343382 15343845 -184286305 + MLT1C LTR MaLR 1 463 -4 1023 193 14 41 chr5 15343930 15344148 -184286002 - AluJo SINE Alu -12 300 89 7601 204 29 16 chr5 15344459 15345155 -184284995 + L1PB4 LINE L1 3632 4317 -1839 1455 97 0 5 chr5 15345155 15345362 -184284788 + AluY SINE Alu 106 311 0 7601 204 29 16 chr5 15345362 15347159 -184282991 + L1PB4 LINE L1 4317 6156 0 2711 120 0 0 chr5 15347173 15347574 -184282576 + L1MA1 LINE L1 5428 5828 -474 328 62 0 0 chr5 15347574 15347622 -184282528 + Alu SINE Alu 253 300 0 3082 97 43 7 chr5 15347649 15348111 -184282039 + L1MA1 LINE L1 5819 6297 -5 2222 185 21 19 chr5 15348633 15349098 -184281052 + L1MC1 LINE L1 5458 5923 -410 1405 189 81 39 chr5 15349098 15349130 -184281020 - MER7A DNA MER2_type -2692 346 317 2272 122 18 52 chr5 15349130 15349516 -184280634 - THE1C LTR MaLR -2 373 1 1405 189 81 39 chr5 15349516 15349816 -184280334 - MER7A DNA MER2_type -2721 317 2 1305 132 4 33 chr5 15349820 15350062 -184280088 + L1MC1 LINE L1 5925 6159 -174 1618 176 0 17 chr5 15350081 15350371 -184279779 - AluSx SINE Alu -26 286 2 1986 145 3 0 chr5 15350381 15350677 -184279473 - AluSx SINE Alu -15 297 1 756 210 11 54 chr5 15350677 15350863 -184279287 + L1MC1 LINE L1 6155 6332 -1 444 285 133 67 chr5 15351207 15351568 -184278582 - L2 LINE L2 -9 3304 2920 522 298 123 52 chr5 15351610 15351936 -184278214 - L2 LINE L2 -528 2786 2438 1448 249 78 42 chr5 15352009 15352508 -184277642 + LTR40a LTR ERVL 3 519 0 180 321 25 37 chr5 15352875 15352956 -184277194 + MIR SINE MIR 37 116 -92 2096 182 50 66 chr5 15352959 15353229 -184276921 - MER67D LTR ERV1 0 514 254 2054 106 48 10 chr5 15353229 15353521 -184276629 - AluSx SINE Alu -9 303 1 2096 182 50 66 chr5 15353521 15353767 -184276383 - MER67D LTR ERV1 -260 254 6 274 130 338 13 chr5 15354587 15354664 -184275486 - MER41A-int LTR ERV1 -5844 102 1 3846 71 29 20 chr5 15354664 15355213 -184274937 - MER41A LTR ERV1 0 554 1 226 265 20 0 chr5 15355999 15356048 -184274102 + MLT1E2 LTR MaLR 1 50 -574 1713 245 62 29 chr5 15356086 15356571 -184273579 + MLT1E2 LTR MaLR 117 617 -9 1011 268 56 20 chr5 15357317 15357732 -184272418 + MLT2F LTR ERVL 67 541 -122 276 179 64 0 chr5 15358077 15358155 -184271995 + (TA)n Simple_repeat Simple_repeat 2 84 0 235 289 44 0 chr5 15358155 15358245 -184271905 + L1MC4 LINE L1 6609 6702 -1340 320 341 7 22 chr5 15358333 15358471 -184271679 + MLT1I LTR MaLR 97 232 -177 333 245 0 43 chr5 15358915 15359009 -184271141 - L1MC4 LINE L1 -1339 6703 6614 228 239 28 0 chr5 15359019 15359090 -184271060 - L1MC3 LINE L1 -1139 6646 6574 321 270 0 73 chr5 15359144 15359281 -184270869 - L1MC4 LINE L1 -1333 6709 6583 320 289 0 11 chr5 15359322 15359412 -184270738 + L1MC4 LINE L1 6615 6703 -1339 315 0 0 0 chr5 15359412 15359447 -184270703 + (TA)n Simple_repeat Simple_repeat 2 36 0 338 346 6 19 chr5 15359900 15360056 -184270094 - MLT1I LTR MaLR -177 232 79 225 0 0 0 chr5 15360212 15360237 -184269913 + (TAGG)n Simple_repeat Simple_repeat 3 27 0 2580 190 91 12 chr5 15360238 15360733 -184269417 - MLT2B3 LTR ERVL -19 535 2 23 33 0 0 chr5 15360962 15360992 -184269158 + AT_rich Low_complexity Low_complexity 1 30 0 521 219 16 8 chr5 15361497 15361625 -184268525 - L1MB7 LINE L1 -23 6161 6033 6444 106 19 11 chr5 15362348 15362688 -184267462 + L1PA8 LINE L1 4360 4696 -1450 315 0 0 0 chr5 15362688 15362723 -184267427 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6444 106 19 11 chr5 15362723 15363406 -184266744 + L1PA8 LINE L1 4696 5391 -755 4946 67 6 21 chr5 15363409 15363611 -184266539 + L1PA8 LINE L1 5509 5712 -460 1891 146 45 0 chr5 15363611 15363898 -184266252 - AluSx SINE Alu -12 300 1 4946 67 6 21 chr5 15363898 15364365 -184265785 + L1PA8 LINE L1 5712 6168 -4 601 305 110 64 chr5 15364554 15365248 -184264902 + L2 LINE L2 2360 3086 -227 1568 229 24 41 chr5 15365261 15365676 -184264474 - LTR52 LTR ERVL -13 408 1 336 304 41 50 chr5 15365676 15365896 -184264254 + L2 LINE L2 3096 3313 0 21 36 0 0 chr5 15366088 15366116 -184264034 + AT_rich Low_complexity Low_complexity 1 28 0 407 207 47 98 chr5 15366451 15366644 -184263506 + LTR37B LTR ERV1 80 262 -206 492 231 32 26 chr5 15366758 15366914 -184263236 + LTR37B LTR ERV1 311 467 -1 5609 163 20 21 chr5 15367995 15369182 -184260968 - L1MA5 LINE L1 -6 6294 5108 1845 122 0 0 chr5 15369182 15369436 -184260714 - AluSg SINE Alu -10 300 47 5609 163 20 21 chr5 15369436 15369862 -184260288 - L1MA5 LINE L1 -1192 5108 4683 22 99 0 0 chr5 15370630 15370701 -184259449 + AT_rich Low_complexity Low_complexity 1 71 0 2026 175 39 3 chr5 15371388 15371770 -184258380 + MSTD LTR MaLR 1 396 0 23 0 0 0 chr5 15371936 15371959 -184258191 + AT_rich Low_complexity Low_complexity 1 23 0 552 256 142 21 chr5 15372041 15372322 -184257828 + MER46C DNA MER2_type 18 332 -6 23 54 0 0 chr5 15372342 15372379 -184257771 + AT_rich Low_complexity Low_complexity 1 37 0 302 328 118 20 chr5 15372718 15372913 -184257237 + L1ME LINE L1 12 225 -5845 314 289 6 96 chr5 15373365 15373531 -184256619 + L1ME LINE L1 328 478 -5592 933 261 89 66 chr5 15373682 15374716 -184255434 + L1ME LINE L1 482 1655 -4425 242 89 63 25 chr5 15374716 15374795 -184255355 + (TA)n Simple_repeat Simple_repeat 1 82 0 334 132 66 32 chr5 15374895 15375317 -184254833 + (CATATA)n Simple_repeat Simple_repeat 1 436 0 323 122 92 6 chr5 15375317 15375481 -184254669 + (TA)n Simple_repeat Simple_repeat 2 179 0 914 249 100 39 chr5 15375555 15375965 -184254185 + L1ME LINE L1 3269 3703 -2377 219 69 0 0 chr5 15375965 15375994 -184254156 + (CA)n Simple_repeat Simple_repeat 2 30 0 917 247 75 25 chr5 15376960 15377239 -184252911 + MLT1H LTR MaLR 238 530 -19 745 235 94 0 chr5 15377859 15378072 -184252078 + MER33 DNA MER1_type 1 233 -91 302 259 38 84 chr5 15378624 15378755 -184251395 + L2 LINE L2 3179 3303 -10 251 294 49 0 chr5 15379435 15379537 -184250613 - L1MC4 LINE L1 -175 7867 7761 996 194 108 108 chr5 15379542 15379617 -184250533 - MLT1E2 LTR MaLR 0 626 552 5663 114 45 0 chr5 15379617 15380647 -184249503 - L1PA15 LINE L1 0 6165 5128 996 194 108 108 chr5 15380647 15381061 -184249089 - MLT1E2 LTR MaLR -73 553 137 372 272 80 34 chr5 15381199 15381438 -184248712 - L1MC5 LINE L1 -389 7572 7323 427 286 18 41 chr5 15381636 15381856 -184248294 - L1MC5 LINE L1 -784 7177 6963 2549 69 0 0 chr5 15381872 15382176 -184247974 - AluY SINE Alu -7 304 1 335 321 177 9 chr5 15382754 15382969 -184247181 - HAL1b LINE L1 -620 728 478 1120 170 25 23 chr5 15382977 15383297 -184246853 - THE1C LTR MaLR 0 375 1 342 301 109 60 chr5 15383354 15383784 -184246366 - HAL1b LINE L1 -954 1343 12 1676 166 16 29 chr5 15384166 15384479 -184245671 - AluJb SINE Alu -3 309 1 189 0 0 0 chr5 15384486 15384507 -184245643 + (T)n Simple_repeat Simple_repeat 1 21 0 1126 269 52 3 chr5 15385098 15385571 -184244579 + MLT1H1 LTR MaLR 1 555 0 289 267 29 9 chr5 15385574 15385679 -184244471 + MLT1H1-int LTR MaLR 4 110 -1261 * 331 293 0 28 chr5 15385660 15385766 -184244384 + MLT1H1-int LTR MaLR 413 515 -856 5214 117 22 16 chr5 15385851 15386665 -184243485 - L1PA11 LINE L1 0 6174 5356 5056 134 29 1 chr5 15386666 15387516 -184242634 + L1PA11 LINE L1 4469 5342 -804 573 266 32 48 chr5 15387563 15387688 -184242462 - MER20 DNA MER1_type 0 219 96 2705 165 18 8 chr5 15387688 15388178 -184241972 + LOR1a LTR ERV1 1 495 -2 573 266 32 48 chr5 15388178 15388240 -184241910 - MER20 DNA MER1_type -123 96 35 661 128 0 0 chr5 15388504 15388598 -184241552 + L1P LINE L1 4508 4601 -1545 2268 95 0 3 chr5 15388610 15388904 -184241246 + AluSg SINE Alu 17 309 -1 238 268 78 56 chr5 15389438 15389580 -184240570 + MLT1H1-int LTR MaLR 1197 1341 -30 1028 296 71 21 chr5 15389608 15390131 -184240019 + MLT1H1 LTR MaLR 1 555 0 187 364 0 0 chr5 15390299 15390365 -184239785 + L3 LINE CR1 649 714 -863 245 392 31 31 chr5 15390657 15390884 -184239266 - MIR SINE MIR -30 232 6 2743 16 7 0 chr5 15392091 15392399 -184237751 + AluY SINE Alu 1 310 -1 276 301 62 9 chr5 15393201 15393314 -184236836 + MIR SINE MIR 78 196 -66 1665 192 34 3 chr5 15393921 15394264 -184235886 + MLT2C1 LTR ERVL 1 425 -39 696 24 0 0 chr5 15394489 15394571 -184235579 + (CA)n Simple_repeat Simple_repeat 1 82 0 910 193 10 40 chr5 15394596 15394798 -184235352 - MSTC LTR MaLR -202 226 31 225 245 20 0 chr5 15394990 15395039 -184235111 + L2 LINE L2 3241 3290 -23 186 189 0 0 chr5 15396253 15396290 -184233860 + (TATATG)n Simple_repeat Simple_repeat 6 42 0 228 159 87 58 chr5 15397016 15397085 -184233065 + L2 LINE L2 3242 3312 -1 726 271 143 31 chr5 15397860 15398412 -184231738 + MLT1G LTR MaLR 13 583 -7 184 250 0 67 chr5 15398551 15398611 -184231539 - MER5B DNA MER1_type -120 58 3 833 143 0 71 chr5 15399581 15399749 -184230401 - MSTB2 LTR MaLR -43 414 259 294 171 55 0 chr5 15399856 15399926 -184230224 - MSTB2 LTR MaLR -350 85 3 704 269 122 0 chr5 15399928 15400125 -184230025 + MER58A DNA MER1_type 1 221 -3 1563 252 78 52 chr5 15400730 15401330 -184228820 + MLT1E2 LTR MaLR 1 618 -8 441 188 26 60 chr5 15401345 15401462 -184228688 + MIR SINE MIR 106 218 -44 2264 168 2 10 chr5 15401888 15402063 -184228087 + MLT1B LTR MaLR 1 176 -214 2041 113 14 3 chr5 15402063 15402347 -184227803 + AluSx SINE Alu 1 287 -25 901 29 50 7 chr5 15402348 15402487 -184227663 + (TAGA)n Simple_repeat Simple_repeat 2 146 0 2264 168 2 10 chr5 15402487 15402702 -184227448 + MLT1B LTR MaLR 175 390 0 1641 211 63 41 chr5 15404599 15405091 -184225059 - MLT1D LTR MaLR 0 505 3 23 0 0 0 chr5 15407184 15407207 -184222943 + AT_rich Low_complexity Low_complexity 1 23 0 490 297 44 29 chr5 15407349 15407696 -184222454 + L1ME3A LINE L1 2932 3305 -2841 2167 186 29 66 chr5 15407701 15408228 -184221922 - MLT2B2 LTR ERVL -8 507 1 393 211 108 58 chr5 15408484 15408707 -184221443 + L1ME3A LINE L1 3599 3832 -2314 4369 241 58 72 chr5 15408830 15411163 -184218987 + L1PA16 LINE L1 3287 5575 -591 2637 146 81 6 chr5 15411172 15411665 -184218485 + L1PA16 LINE L1 5637 6166 0 1614 196 17 8 chr5 15411665 15412020 -184218130 + L1MB4 LINE L1 5815 6179 -1 349 300 141 7 chr5 15412185 15412462 -184217688 + L1ME3A LINE L1 4514 4827 -1319 495 0 0 0 chr5 15412520 15412575 -184217575 + (CA)n Simple_repeat Simple_repeat 2 56 0 429 313 72 16 chr5 15412603 15412855 -184217295 + L1ME3A LINE L1 5039 5298 -848 2610 105 8 0 chr5 15413021 15413382 -184216768 + THE1B LTR MaLR 1 364 0 332 249 100 53 chr5 15413420 15413621 -184216529 + L1ME3A LINE L1 5591 5810 -360 378 315 11 11 chr5 15413621 15413799 -184216351 - MER5B DNA MER1_type 0 178 1 332 249 100 53 chr5 15413799 15413878 -184216272 + L1ME3A LINE L1 5810 5884 -286 729 191 33 16 chr5 15414142 15414325 -184215825 - L1MA6 LINE L1 -3 6297 6112 387 0 0 0 chr5 15414660 15414703 -184215447 + (CA)n Simple_repeat Simple_repeat 1 43 0 212 282 35 12 chr5 15415295 15415380 -184214770 + (TATG)n Simple_repeat Simple_repeat 4 90 0 240 143 0 0 chr5 15418313 15418355 -184211795 + (TG)n Simple_repeat Simple_repeat 1 42 0 189 74 0 0 chr5 15418358 15418385 -184211765 + (GA)n Simple_repeat Simple_repeat 2 28 0 4118 164 73 32 chr5 15418385 15419257 -184210893 + MER21A LTR ERV1 24 931 0 212 339 139 17 chr5 15419336 15419451 -184210699 - MIR3 SINE MIR -21 187 59 190 356 30 20 chr5 15419649 15419750 -184210400 + L2 LINE L2 2872 2973 -340 755 288 29 34 chr5 15420531 15420948 -184209202 + L1PA16 LINE L1 1 415 -7166 252 287 22 29 chr5 15421763 15421899 -184208251 + L1M2b LINE L1 1279 1413 -5796 7088 224 88 12 chr5 15422327 15423750 -184206400 + L1PA16 LINE L1 2096 3409 -4175 2381 91 3 0 chr5 15423750 15424057 -184206093 + AluY SINE Alu 1 308 -3 7088 224 88 12 chr5 15424057 15426002 -184204148 + L1PA16 LINE L1 3409 5748 -1836 1499 155 99 40 chr5 15426002 15426356 -184203794 + THE1C LTR MaLR 1 375 0 9494 131 16 37 chr5 15426358 15427971 -184202179 + THE1C-int LTR MaLR 3 1580 0 792 174 85 57 chr5 15427971 15428183 -184201967 + THE1C LTR MaLR 1 218 -146 4230 162 53 30 chr5 15428183 15428592 -184201558 + L1PA16 LINE L1 6265 6663 -941 2398 140 57 2 chr5 15428592 15428998 -184201152 - MSTA LTR MaLR 0 428 1 4230 162 53 30 chr5 15428998 15429907 -184200243 + L1PA16 LINE L1 6663 7604 0 832 274 93 17 chr5 15430866 15431286 -184198864 + HsTC2 DNA Tc2 40 491 -1407 409 206 58 26 chr5 15431356 15431511 -184198639 + HsTC2 DNA Tc2 1736 1895 -3 478 234 72 9 chr5 15433384 15433495 -184196655 + MER5C DNA MER1_type 2 119 -205 200 233 183 0 chr5 15433614 15433674 -184196476 + MER5C DNA MER1_type 247 317 -7 189 0 0 0 chr5 15434275 15434296 -184195854 + (CA)n Simple_repeat Simple_repeat 1 21 0 282 116 0 0 chr5 15434350 15434393 -184195757 + (CA)n Simple_repeat Simple_repeat 1 43 0 201 121 0 0 chr5 15434449 15434482 -184195668 + (CA)n Simple_repeat Simple_repeat 1 33 0 204 97 0 0 chr5 15434554 15434585 -184195565 + (CA)n Simple_repeat Simple_repeat 1 31 0 468 314 103 0 chr5 15434838 15435013 -184195137 + MIR SINE MIR 40 232 -30 200 35 35 0 chr5 15435535 15435564 -184194586 + (GA)n Simple_repeat Simple_repeat 2 31 0 1701 166 51 7 chr5 15436169 15436464 -184193686 - AluJb SINE Alu -4 308 1 1530 195 35 27 chr5 15436883 15437063 -184193087 + L1MB8 LINE L1 5462 5639 -527 2161 130 18 50 chr5 15437063 15437462 -184192688 + MLT1B LTR MaLR 5 390 0 1530 195 35 27 chr5 15437462 15437834 -184192316 + L1MB8 LINE L1 5639 6121 -45 699 86 0 0 chr5 15437871 15437964 -184192186 - AluS SINE Alu -212 101 9 1352 134 19 0 chr5 15437964 15438173 -184191977 + AluSg/x SINE Alu 97 309 -3 235 372 28 0 chr5 15440959 15441092 -184189058 - MIR3 SINE MIR -15 193 53 2670 178 46 48 chr5 15441175 15441194 -184188956 + L1MC3 LINE L1 6603 6621 -1164 449 141 26 0 chr5 15441194 15441272 -184188878 + MADE1 DNA Mariner 1 80 0 2670 178 46 48 chr5 15441272 15441966 -184188184 + L1MC3 LINE L1 6621 7315 -470 461 296 0 40 chr5 15441967 15442119 -184188031 + MLT1G1 LTR MaLR 167 312 -283 593 219 18 43 chr5 15442139 15442303 -184187847 - MLT1G1 LTR MaLR -435 160 1 522 325 181 42 chr5 15442303 15443218 -184186932 - L2 LINE L2 -1568 1746 704 276 239 86 129 chr5 15444019 15444274 -184185876 - L2 LINE L2 -57 3256 3013 722 250 128 76 chr5 15444713 15445245 -184184905 - MLT1F1 LTR MaLR -4 563 10 2286 128 5 16 chr5 15446885 15447253 -184182897 - THE1B LTR MaLR 0 364 1 1367 159 29 40 chr5 15447253 15447530 -184182620 - MER50 LTR ERV1 -28 706 433 1237 129 36 18 chr5 15447524 15447749 -184182401 - MER50 LTR ERV1 -505 229 1 * 386 244 79 55 chr5 15447836 15448000 -184182150 - MLT1H LTR MaLR 0 549 382 744 212 139 124 chr5 15448040 15448516 -184181634 + MER21B LTR ERV1 9 491 -372 3538 268 33 32 chr5 15448538 15450615 -184179535 + L1M4c LINE L1 48 1976 -5192 1921 163 78 3 chr5 15450926 15451287 -184178863 + MLT1B LTR MaLR 1 388 -2 1199 94 49 67 chr5 15451381 15451605 -184178545 + MER50 LTR ERV1 1 220 -514 1078 103 62 36 chr5 15451721 15451915 -184178235 + MER50 LTR ERV1 22 220 -514 1428 124 3 78 chr5 15451917 15452199 -184177951 + MER50 LTR ERV1 437 697 -37 1144 266 43 26 chr5 15452984 15453405 -184176745 - LTR16A LTR ERVL -9 441 14 258 353 37 20 chr5 15453872 15454172 -184175978 - HERV16 LTR ERVL -764 5000 4696 1261 365 51 29 chr5 15454265 15455801 -184174349 - HERV16 LTR ERVL -1206 4558 2988 41122 30 22 1 chr5 15456046 15462075 -184168075 + L1HS LINE L1 1 6154 -1 306 292 110 38 chr5 15462078 15462287 -184167863 + L1M4c LINE L1 3006 3229 -3940 1971 296 69 36 chr5 15462479 15463538 -184166612 - HERV16 LTR ERVL -3710 1286 193 263 301 69 45 chr5 15463585 15463837 -184166313 - LTR16A LTR ERVL -139 311 61 22 35 0 0 chr5 15464178 15464207 -184165943 + AT_rich Low_complexity Low_complexity 1 29 0 241 356 69 20 chr5 15464432 15464533 -184165617 + L2 LINE L2 3161 3266 -6 572 244 199 42 chr5 15465026 15465382 -184164768 + MLT1J LTR MaLR 53 464 -47 1625 223 61 51 chr5 15466283 15466790 -184163360 - LTR40a LTR ERVL -7 512 1 2321 56 0 11 chr5 15466834 15467205 -184162945 + AluY SINE Alu 1 368 0 727 204 50 0 chr5 15467205 15467386 -184162764 + MER3 DNA MER1_type 19 208 -1 1614 215 33 62 chr5 15467700 15468220 -184161930 - MLT1D LTR MaLR 0 505 1 754 328 67 51 chr5 15468275 15468807 -184161343 - L2 LINE L2 -82 3231 2709 1896 155 0 13 chr5 15468807 15469111 -184161039 - AluSx SINE Alu -7 305 6 754 328 67 51 chr5 15469111 15469564 -184160586 - L2 LINE L2 -604 2709 2210 300 53 0 0 chr5 15469564 15469602 -184160548 + (TA)n Simple_repeat Simple_repeat 2 39 0 754 328 67 51 chr5 15469602 15469780 -184160370 - L2 LINE L2 -1103 2210 2036 1548 129 14 7 chr5 15469780 15470059 -184160091 + L1MA7 LINE L1 6011 6291 0 3777 170 7 3 chr5 15470064 15470783 -184159367 - L1PA15 LINE L1 -2026 4120 3399 5440 162 20 11 chr5 15470785 15471272 -184158878 + L1PA15 LINE L1 4153 4634 -1531 1598 188 67 0 chr5 15471272 15471554 -184158596 + AluSx SINE Alu 1 301 -11 5440 162 20 11 chr5 15471554 15472935 -184157215 + L1PA15 LINE L1 4634 6034 -131 1824 126 22 7 chr5 15472939 15473210 -184156940 + AluSx SINE Alu 1 275 -37 417 103 0 15 chr5 15473210 15473278 -184156872 + L1PA15 LINE L1 6092 6158 -7 216 216 0 0 chr5 15473402 15473453 -184156697 + (TA)n Simple_repeat Simple_repeat 1 51 0 717 308 152 38 chr5 15473470 15474055 -184156095 - L2 LINE L2 -1268 2046 1395 457 298 62 19 chr5 15474398 15474559 -184155591 - MIR SINE MIR -74 188 21 1889 155 15 48 chr5 15476535 15476843 -184153307 - MLT1B LTR MaLR 0 390 96 2140 109 0 0 chr5 15476843 15477127 -184153023 + AluSg SINE Alu 7 290 -20 1889 155 15 48 chr5 15477127 15477212 -184152938 - MLT1B LTR MaLR -294 96 10 3430 25 5 0 chr5 15477216 15477617 -184152533 + L1PA3 LINE L1 5743 6145 -10 188 308 154 0 chr5 15477889 15478006 -184152144 - L2 LINE L2 -242 3030 2896 25 0 0 0 chr5 15479056 15479081 -184151069 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 15479297 15479325 -184150825 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr5 15480264 15480306 -184149844 + AT_rich Low_complexity Low_complexity 1 42 0 182 171 98 0 chr5 15480498 15480539 -184149611 - L2 LINE L2 -5 3267 3223 25 65 0 0 chr5 15481330 15481376 -184148774 + AT_rich Low_complexity Low_complexity 1 46 0 208 182 15 45 chr5 15481564 15481630 -184148520 + A-rich Low_complexity Low_complexity 1 64 0 218 240 219 0 chr5 15482547 15482643 -184147507 - MIR SINE MIR -24 238 122 331 319 83 13 chr5 15482922 15483111 -184147039 + MIR SINE MIR 13 214 -48 338 265 0 13 chr5 15483935 15484086 -184146064 + (CATATA)n Simple_repeat Simple_repeat 6 154 0 32 0 0 0 chr5 15484302 15484334 -184145816 + AT_rich Low_complexity Low_complexity 1 32 0 1338 41 18 0 chr5 15485916 15486085 -184144065 + L1PA4 LINE L1 5984 6155 0 1581 292 143 8 chr5 15486170 15486938 -184143212 + L2 LINE L2 35 906 -2408 766 149 6 48 chr5 15486954 15486986 -184143164 + MLT1A2 LTR MaLR 2 34 -340 2367 137 18 0 chr5 15486986 15487372 -184142778 - L1PA11 LINE L1 -5 6169 5777 766 149 6 48 chr5 15487372 15487507 -184142643 + MLT1A2 LTR MaLR 34 162 -212 339 25 0 0 chr5 15487525 15487565 -184142585 + (TC)n Simple_repeat Simple_repeat 2 41 0 1734 194 38 29 chr5 15487710 15488258 -184141892 - MLT2A2 LTR ERVL 0 554 1 377 197 0 0 chr5 15488258 15488329 -184141821 + MLT1A2 LTR MaLR 302 372 -2 354 298 33 13 chr5 15488334 15488485 -184141665 + L2 LINE L2 920 1073 -2241 1517 272 103 28 chr5 15488561 15488629 -184141521 + L2 LINE L2 1833 1895 -1419 213 39 0 0 chr5 15488629 15488655 -184141495 + (CAT)n Simple_repeat Simple_repeat 3 28 0 1517 272 103 28 chr5 15488655 15489219 -184140931 + L2 LINE L2 1895 2512 -802 234 0 0 0 chr5 15490077 15490103 -184140047 + (A)n Simple_repeat Simple_repeat 1 26 0 306 73 0 0 chr5 15490253 15490294 -184139856 + (TG)n Simple_repeat Simple_repeat 1 41 0 196 231 83 37 chr5 15490506 15490614 -184139536 + L2 LINE L2 2975 3087 -226 1327 220 52 65 chr5 15490620 15491084 -184139066 + MLT2C2 LTR ERVL 7 464 0 287 159 0 0 chr5 15491353 15491411 -184138739 + MLT2C1 LTR ERVL 350 397 0 499 288 35 53 chr5 15491574 15491800 -184138350 - MIR SINE MIR -36 226 5 215 171 0 0 chr5 15493805 15493840 -184136310 + L3 LINE CR1 932 966 -611 407 284 32 13 chr5 15494077 15494232 -184135918 + MER90 LTR ERV1 404 561 -14 425 257 151 0 chr5 15494294 15494446 -184135704 - MER5A DNA MER1_type -6 183 9 189 336 217 14 chr5 15494462 15494605 -184135545 + MER5B DNA MER1_type 1 172 -6 404 308 60 33 chr5 15496768 15497067 -184133083 + L1ME4a LINE L1 5078 5384 -762 607 317 35 16 chr5 15497152 15497524 -184132626 + L1ME4a LINE L1 5483 5861 -260 729 197 58 24 chr5 15498026 15498313 -184131837 - MLT1A2 LTR MaLR -1 373 43 1718 172 35 3 chr5 15498411 15498696 -184131454 + AluJb SINE Alu 1 294 -18 342 0 0 0 chr5 15498703 15498741 -184131409 + (TA)n Simple_repeat Simple_repeat 2 39 0 206 317 79 10 chr5 15499454 15499555 -184130595 + MIR SINE MIR 42 149 -59 344 214 0 24 chr5 15499594 15499678 -184130472 + L1ME4a LINE L1 5960 6041 -80 24 67 0 0 chr5 15499793 15499838 -184130312 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 15499998 15500019 -184130131 + AT_rich Low_complexity Low_complexity 1 21 0 1622 194 56 31 chr5 15500445 15500801 -184129349 + MLT1A1 LTR MaLR 1 365 0 2087 178 34 15 chr5 15501113 15501509 -184128641 - L1MA8 LINE L1 0 6291 5904 2601 145 9 23 chr5 15501509 15501943 -184128207 + MSTC LTR MaLR 1 428 0 2087 178 34 15 chr5 15501943 15502000 -184128150 - L1MA8 LINE L1 -387 5904 5826 216 0 0 0 chr5 15502000 15502024 -184128126 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2087 178 34 15 chr5 15502024 15502035 -184128115 - L1MA8 LINE L1 -465 5826 5817 * 5277 141 23 18 chr5 15502029 15502711 -184127439 - L1PA15 LINE L1 -5 6811 6134 2192 112 36 7 chr5 15502711 15503015 -184127135 - AluSq SINE Alu 0 313 1 5277 141 23 18 chr5 15503015 15504322 -184125828 - L1PA15 LINE L1 -682 6134 4829 5638 217 11 60 chr5 15504333 15505402 -184124748 - L1PA15 LINE L1 -3078 3719 2599 2282 87 3 0 chr5 15505402 15505689 -184124461 + AluY SINE Alu 1 288 -23 5638 217 11 60 chr5 15505689 15507123 -184123027 - L1PA15 LINE L1 -4198 2599 1332 2111 291 19 26 chr5 15507200 15507929 -184122221 - L1PA15 LINE L1 -6063 724 1 9852 174 24 66 chr5 15507945 15508453 -184121697 - L1MA8 LINE L1 -478 5822 5294 2468 104 14 14 chr5 15508453 15508808 -184121342 - THE1A LTR MaLR 0 355 1 9852 174 24 66 chr5 15508808 15510603 -184119547 - L1MA8 LINE L1 -1006 5294 3518 1188 65 19 0 chr5 15510603 15510801 -184119349 - AluY SINE Alu 0 327 127 9852 174 24 66 chr5 15510801 15511402 -184118748 - L1MA8 LINE L1 -2782 3518 2893 2115 212 38 26 chr5 15511403 15511983 -184118167 + MER49 LTR ERV1 180 766 -157 680 255 0 5 chr5 15512122 15512306 -184117844 - L1MA8 LINE L1 -3251 2895 2713 1044 230 119 28 chr5 15512523 15512704 -184117446 + MSTD LTR MaLR 1 164 -232 2009 130 29 35 chr5 15512704 15513080 -184117070 - THE1C LTR MaLR 0 375 2 1044 230 119 28 chr5 15513080 15513259 -184116891 + MSTD LTR MaLR 164 394 -2 6404 228 62 35 chr5 15513261 15514833 -184115317 + MSTD-int LTR MaLR 2 1623 -112 2310 98 0 7 chr5 15514833 15515140 -184115010 - AluSq SINE Alu -8 305 1 6404 228 62 35 chr5 15515140 15515257 -184114893 + MSTD-int LTR MaLR 1623 1735 0 910 210 55 53 chr5 15515257 15515599 -184114551 + MLT1A1 LTR MaLR 1 429 -3 280 319 203 12 chr5 15516159 15516322 -184113828 + MIR SINE MIR 37 230 -32 931 234 152 34 chr5 15516676 15517294 -184112856 + LTR50 LTR ERVL 4 791 -4 334 197 0 0 chr5 15517370 15517431 -184112719 - MER81 DNA DNA -1 113 53 1305 176 119 62 chr5 15517696 15518065 -184112085 - MLT1B LTR MaLR 0 390 1 26 0 0 0 chr5 15518118 15518144 -184112006 + AT_rich Low_complexity Low_complexity 1 26 0 1006 302 40 3 chr5 15519244 15519644 -184110506 + L2 LINE L2 2646 3061 -252 200 280 27 40 chr5 15520136 15520211 -184109939 + L2 LINE L2 2719 2792 -522 278 294 20 0 chr5 15522006 15522108 -184108042 + (TA)n Simple_repeat Simple_repeat 1 104 0 1522 17 0 0 chr5 15522419 15522592 -184107558 - L1PA3 LINE L1 -4 6151 5979 249 295 95 42 chr5 15522898 15523088 -184107062 - L2 LINE L2 -64 3249 3050 222 150 0 0 chr5 15524417 15524457 -184105693 + (TG)n Simple_repeat Simple_repeat 2 41 0 359 280 99 74 chr5 15525336 15525442 -184104708 + MIR SINE MIR 14 116 -146 1989 149 7 0 chr5 15525442 15525738 -184104412 - AluSx SINE Alu -14 298 1 359 280 99 74 chr5 15525738 15525874 -184104276 + MIR SINE MIR 116 262 0 281 306 127 8 chr5 15526998 15527132 -184103018 + LTR16A LTR ERVL 1 150 -300 304 333 175 0 chr5 15527133 15527253 -184102897 + L2 LINE L2 2449 2589 -725 715 207 36 72 chr5 15527254 15527476 -184102674 + MER20 DNA MER1_type 1 214 -5 1051 261 157 28 chr5 15527478 15528111 -184102039 + L2 LINE L2 2580 3313 0 701 235 104 0 chr5 15528551 15528734 -184101416 - MER67D LTR ERV1 -3 511 310 1215 176 19 85 chr5 15528788 15529107 -184101043 - MER67D LTR ERV1 -203 311 14 1413 208 30 30 chr5 15529323 15529684 -184100466 + MLT1A1 LTR MaLR 5 365 0 194 62 31 0 chr5 15530461 15530493 -184099657 + (TA)n Simple_repeat Simple_repeat 2 34 0 201 147 0 0 chr5 15531384 15531418 -184098732 + (TA)n Simple_repeat Simple_repeat 1 34 0 249 295 16 33 chr5 15532324 15532446 -184097704 - MLT1H LTR MaLR -19 530 411 1278 315 116 34 chr5 15533183 15534391 -184095759 - L2 LINE L2 -588 2726 1420 2607 224 43 87 chr5 15534690 15535657 -184094493 + L1M4 LINE L1 5 929 -5613 468 106 8 3 chr5 15535667 15535903 -184094247 + AluY SINE Alu 1 300 -11 2207 220 56 58 chr5 15536010 15536241 -184093909 + L1M4 LINE L1 975 1205 -5441 4353 63 4 0 chr5 15536241 15536798 -184093352 - L1PA8 LINE L1 -8 6164 5606 2207 220 56 58 chr5 15536798 15537537 -184092613 + L1M4 LINE L1 1205 1943 -4703 1265 303 38 28 chr5 15537537 15537939 -184092211 + ERVL LTR ERVL 1726 2135 -2861 2028 118 55 30 chr5 15537939 15538305 -184091845 - THE1C LTR MaLR 0 375 1 1265 303 38 28 chr5 15538305 15538403 -184091747 + ERVL LTR ERVL 2135 2231 -2765 541 329 52 49 chr5 15538404 15539176 -184090974 + ERVL LTR ERVL 4603 5376 -388 635 259 99 12 chr5 15539196 15539439 -184090711 + LTR16B LTR ERVL 189 452 -12 329 310 108 8 chr5 15540927 15541056 -184089094 - MIR SINE MIR -74 188 47 2602 141 30 2 chr5 15541685 15542154 -184087996 + L1MB2 LINE L1 5688 6169 -2 2139 126 51 28 chr5 15543296 15543652 -184086498 + THE1B LTR MaLR 1 364 0 11193 90 37 3 chr5 15543652 15545180 -184084970 + THE1B-int LTR MaLR 1 1580 0 2260 103 60 20 chr5 15545180 15545530 -184084620 + THE1B LTR MaLR 1 364 0 243 0 0 0 chr5 15546222 15546249 -184083901 + (A)n Simple_repeat Simple_repeat 1 27 0 360 64 0 0 chr5 15546399 15546446 -184083704 + (TG)n Simple_repeat Simple_repeat 1 47 0 196 231 83 37 chr5 15546658 15546766 -184083384 + L2 LINE L2 2975 3087 -226 1327 220 52 65 chr5 15546772 15547236 -184082914 + MLT2C2 LTR ERVL 7 464 0 287 159 0 0 chr5 15547505 15547563 -184082587 + MLT2C1 LTR ERVL 350 397 0 499 288 35 53 chr5 15547726 15547952 -184082198 - MIR SINE MIR -36 226 5 215 171 0 0 chr5 15549957 15549992 -184080158 + L3 LINE CR1 932 966 -611 407 284 32 13 chr5 15550229 15550384 -184079766 + MER90 LTR ERV1 404 561 -14 425 257 151 0 chr5 15550446 15550598 -184079552 - MER5A DNA MER1_type -6 183 9 189 336 217 14 chr5 15550614 15550757 -184079393 + MER5B DNA MER1_type 1 172 -6 404 308 60 33 chr5 15552918 15553217 -184076933 + L1ME4a LINE L1 5078 5384 -762 607 317 35 16 chr5 15553302 15553674 -184076476 + L1ME4a LINE L1 5483 5861 -260 769 190 58 24 chr5 15554172 15554459 -184075691 - MLT1A2 LTR MaLR -1 373 43 1727 171 35 3 chr5 15554557 15554843 -184075307 + AluJb SINE Alu 1 295 -17 270 0 0 0 chr5 15554850 15554880 -184075270 + (TA)n Simple_repeat Simple_repeat 2 31 0 205 307 79 10 chr5 15555593 15555694 -184074456 + MIR SINE MIR 42 149 -59 344 214 0 24 chr5 15555733 15555817 -184074333 + L1ME4a LINE L1 5960 6041 -80 24 67 0 0 chr5 15555932 15555977 -184074173 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 15556137 15556158 -184073992 + AT_rich Low_complexity Low_complexity 1 21 0 1638 191 56 31 chr5 15556584 15556940 -184073210 + MLT1A1 LTR MaLR 1 365 0 2106 180 32 15 chr5 15557252 15557649 -184072501 - L1MA8 LINE L1 0 6291 5902 2564 150 9 23 chr5 15557649 15558083 -184072067 + MSTC LTR MaLR 1 428 0 2106 180 32 15 chr5 15558083 15558140 -184072010 - L1MA8 LINE L1 -389 5902 5826 216 0 0 0 chr5 15558140 15558164 -184071986 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2106 180 32 15 chr5 15558164 15558175 -184071975 - L1MA8 LINE L1 -465 5826 5817 * 5346 136 23 18 chr5 15558169 15558851 -184071299 - L1PA15 LINE L1 -5 6811 6134 2192 112 36 7 chr5 15558851 15559155 -184070995 - AluSq SINE Alu 0 313 1 5346 136 23 18 chr5 15559155 15560462 -184069688 - L1PA15 LINE L1 -682 6134 4829 5554 225 12 37 chr5 15560473 15561542 -184068608 - L1PA15 LINE L1 -3078 3719 2625 2282 87 3 0 chr5 15561542 15561829 -184068321 + AluY SINE Alu 1 288 -23 5554 225 12 37 chr5 15561829 15563213 -184066937 - L1PA15 LINE L1 -4172 2625 1332 2184 291 24 19 chr5 15563290 15564011 -184066139 - L1PA15 LINE L1 -6063 724 1 8898 175 24 16 chr5 15564027 15564535 -184065615 - L1MA8 LINE L1 -478 5822 5320 2484 101 14 14 chr5 15564535 15564890 -184065260 - THE1A LTR MaLR 0 355 1 8898 175 24 16 chr5 15564890 15566685 -184063465 - L1MA8 LINE L1 -980 5320 3494 1188 65 19 0 chr5 15566685 15566883 -184063267 - AluY SINE Alu 0 327 127 2050 222 28 8 chr5 15566883 15567486 -184062664 - L1MA8 LINE L1 -2639 3507 2893 2110 209 40 28 chr5 15567487 15568067 -184062083 + MER49 LTR ERV1 180 766 -157 717 245 0 5 chr5 15568206 15568390 -184061760 - L1MA8 LINE L1 -3251 2895 2713 1057 227 119 28 chr5 15568607 15568788 -184061362 + MSTD LTR MaLR 1 164 -232 1996 133 29 35 chr5 15568788 15569164 -184060986 - THE1C LTR MaLR 0 375 2 1057 227 119 28 chr5 15569164 15569343 -184060807 + MSTD LTR MaLR 164 394 -2 6356 233 57 33 chr5 15569345 15570921 -184059229 + MSTD-int LTR MaLR 2 1622 -113 2380 95 0 6 chr5 15570921 15571236 -184058914 - AluSq SINE Alu 0 313 1 6356 233 57 33 chr5 15571236 15571353 -184058797 + MSTD-int LTR MaLR 1622 1735 0 895 212 55 53 chr5 15571353 15571695 -184058455 + MLT1A1 LTR MaLR 1 429 -3 280 319 203 12 chr5 15572255 15572418 -184057732 + MIR SINE MIR 37 230 -32 935 233 152 34 chr5 15572772 15573390 -184056760 + LTR50 LTR ERVL 4 791 -4 334 197 0 0 chr5 15573466 15573527 -184056623 - MER81 DNA DNA -1 113 53 1305 176 119 62 chr5 15573792 15574161 -184055989 - MLT1B LTR MaLR 0 390 1 26 0 0 0 chr5 15574214 15574240 -184055910 + AT_rich Low_complexity Low_complexity 1 26 0 184 382 0 0 chr5 15575388 15575456 -184054694 + L2 LINE L2 2976 3043 -229 1712 296 131 23 chr5 15575635 15576638 -184053512 - L2 LINE L2 0 3313 2158 828 222 27 40 chr5 15576638 15576863 -184053287 + MER58A DNA MER1_type 3 224 0 1712 296 131 23 chr5 15576863 15576993 -184053157 - L2 LINE L2 -1155 2158 2043 234 250 29 15 chr5 15576996 15577064 -184053086 + L2 LINE L2 3229 3297 -16 2200 97 23 19 chr5 15577120 15577430 -184052720 + AluY SINE Alu 1 311 0 245 319 64 14 chr5 15578218 15578359 -184051791 - MIR SINE MIR -54 208 61 1551 183 134 78 chr5 15579555 15580031 -184050119 + MLT1D LTR MaLR 3 505 0 2394 125 37 0 chr5 15581445 15581821 -184048329 - MLT1B LTR MaLR 0 390 1 381 260 52 26 chr5 15582154 15582308 -184047842 - MER103 DNA DNA -2 164 7 1235 239 66 68 chr5 15582557 15582581 -184047569 + MLT1D LTR MaLR 4 27 -599 450 36 0 0 chr5 15582581 15582637 -184047513 + (CA)n Simple_repeat Simple_repeat 1 56 0 1235 239 66 68 chr5 15582637 15582913 -184047237 + MLT1D LTR MaLR 27 302 -324 1903 124 69 36 chr5 15582913 15583276 -184046874 + THE1C LTR MaLR 1 375 0 10304 117 15 30 chr5 15583276 15584880 -184045270 + THE1C-int LTR MaLR 1 1580 0 2283 127 16 21 chr5 15584880 15585257 -184044893 + THE1C LTR MaLR 1 375 0 1235 239 66 68 chr5 15585257 15585468 -184044682 + MLT1D LTR MaLR 299 626 0 463 223 76 76 chr5 15585861 15586018 -184044132 - L2 LINE L2 -4 3309 3153 1505 206 90 30 chr5 15586058 15586460 -184043690 - MLT1C LTR MaLR -41 426 1 2491 76 19 93 chr5 15586606 15586995 -184043155 + MLT2A1 LTR ERVL 8 357 -87 315 0 0 0 chr5 15586995 15587030 -184043120 + (TG)n Simple_repeat Simple_repeat 2 36 0 2491 76 19 93 chr5 15587030 15587112 -184043038 + MLT2A1 LTR ERVL 357 444 0 324 314 66 15 chr5 15587463 15587600 -184042550 - MIR SINE MIR -72 190 47 227 365 31 0 chr5 15589089 15589185 -184040965 - MIR SINE MIR -108 154 56 238 279 293 7 chr5 15589277 15589424 -184040726 + L2 LINE L2 2203 2391 -923 2225 172 203 20 chr5 15589690 15589926 -184040224 - L1MC3 LINE L1 -26 7759 7568 2430 71 3 0 chr5 15589926 15590223 -184039927 + AluSc SINE Alu 1 298 -11 2225 172 203 20 chr5 15590223 15590596 -184039554 - L1MC3 LINE L1 -217 7568 7038 472 161 54 0 chr5 15590596 15590689 -184039461 + MER4A LTR ERV1 1 98 -566 1648 131 3 77 chr5 15590689 15591062 -184039088 + MER4A LTR ERV1 261 664 0 779 129 29 0 chr5 15591068 15591207 -184038943 - L1MC3 LINE L1 -738 7047 6905 283 263 10 30 chr5 15591451 15591550 -184038600 - MIR SINE MIR -77 185 89 201 39 0 0 chr5 15591590 15591616 -184038534 + (CAGCC)n Simple_repeat Simple_repeat 1 26 0 367 328 63 11 chr5 15592043 15592217 -184037933 + MIR3 SINE MIR 7 189 -19 248 231 77 0 chr5 15592248 15592326 -184037824 + MER112 DNA MER1_type 74 157 -103 475 158 110 24 chr5 15592342 15592469 -184037681 - L1MA8 LINE L1 -6 6285 6148 3737 128 62 3 chr5 15592590 15593058 -184037092 + LTR9 LTR ERV1 1 511 -101 185 0 0 39 chr5 15593058 15593084 -184037066 + (TTCTC)n Simple_repeat Simple_repeat 2 26 0 3737 128 62 3 chr5 15593084 15593193 -184036957 + LTR9 LTR ERV1 511 612 0 297 279 85 0 chr5 15593337 15593442 -184036708 + MIR SINE MIR 47 146 -62 2436 132 108 32 chr5 15593790 15594291 -184035859 + LTR8A LTR ERV1 1 539 -188 1710 165 18 127 chr5 15594347 15594899 -184035251 - LTR22B LTR ERVK 0 492 1 759 149 39 72 chr5 15594899 15595078 -184035072 + LTR8A LTR ERV1 555 727 0 603 204 62 0 chr5 15595402 15595564 -184034586 + MER67C LTR ERV1 1 172 -538 744 176 8 0 chr5 15595564 15595689 -184034461 + AluJo SINE Alu 1 126 -186 2566 158 36 50 chr5 15595704 15596226 -184033924 + MER67C LTR ERV1 160 675 -35 1612 199 38 30 chr5 15596226 15596597 -184033553 - MLT1A2 LTR MaLR 0 374 1 2566 158 36 50 chr5 15596597 15596632 -184033518 + MER67C LTR ERV1 675 709 -1 1605 161 77 51 chr5 15597052 15597405 -184032745 + MSTA LTR MaLR 67 428 0 597 326 59 7 chr5 15597405 15597678 -184032472 - LTR16A1 LTR ERVL -122 335 49 388 268 84 21 chr5 15598103 15598245 -184031905 - MIR SINE MIR -82 180 30 209 255 79 26 chr5 15598282 15598393 -184031757 + MIR SINE MIR 56 144 -64 191 341 35 0 chr5 15599350 15599435 -184030715 - L3 LINE CR1 0 1577 1490 3675 152 6 13 chr5 15599657 15600289 -184029861 - LTR48B LTR ERV1 -16 628 1 186 43 0 0 chr5 15601103 15601126 -184029024 + (TG)n Simple_repeat Simple_repeat 2 24 0 412 272 177 7 chr5 15601160 15601307 -184028843 - MER5A DNA MER1_type -1 188 17 2374 83 0 13 chr5 15601307 15601607 -184028543 - AluY SINE Alu -15 296 1 25 31 0 0 chr5 15602712 15602744 -184027406 + AT_rich Low_complexity Low_complexity 1 32 0 667 275 66 30 chr5 15603490 15603795 -184026355 + MLT1J2 LTR MaLR 6 321 -129 1379 245 58 41 chr5 15604074 15604540 -184025610 + MLT1E2 LTR MaLR 151 624 -2 580 234 71 50 chr5 15604706 15604906 -184025244 + L1MDa LINE L1 449 776 -5764 21 0 0 0 chr5 15605118 15605139 -184025011 + AT_rich Low_complexity Low_complexity 1 21 0 1036 168 0 6 chr5 15606112 15606279 -184023871 + AluJo SINE Alu 125 290 -22 207 0 0 0 chr5 15606692 15606715 -184023435 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1789 216 39 28 chr5 15607133 15607595 -184022555 + MLT1C LTR MaLR 1 467 0 522 218 21 28 chr5 15607637 15607779 -184022371 + L2 LINE L2 2472 2612 -702 780 179 50 0 chr5 15608090 15608256 -184021894 + MER58B DNA MER1_type 157 333 -8 * 1072 311 73 31 chr5 15608255 15608691 -184021459 + MER115 DNA AcHobo 164 623 -70 1927 138 31 56 chr5 15608691 15609047 -184021103 + MER7A DNA MER2_type 2 346 0 1072 311 73 31 chr5 15609047 15609092 -184021058 + MER115 DNA AcHobo 623 665 -28 420 276 120 100 chr5 15609789 15610279 -184019871 - L2 LINE L2 -3 3310 2811 2150 186 94 34 chr5 15610303 15610888 -184019262 - Cheshire DNA MER1_type -19 2401 1782 1051 233 101 3 chr5 15611653 15611941 -184018209 - MLT1E2 LTR MaLR -8 618 303 238 314 0 0 chr5 15612058 15612128 -184018022 - MLT1E1 LTR MaLR -584 70 1 685 176 154 147 chr5 15612750 15613029 -184017121 + LTR8 LTR ERV1 1 281 -446 957 193 65 103 chr5 15613067 15613512 -184016638 + LTR8A LTR ERV1 287 714 -13 24 0 0 0 chr5 15613794 15613818 -184016332 + AT_rich Low_complexity Low_complexity 1 24 0 684 245 77 10 chr5 15614314 15614522 -184015628 - MLT1G LTR MaLR 0 590 369 346 295 0 19 chr5 15615622 15615727 -184014423 + L2 LINE L2 3162 3264 -8 27 0 0 0 chr5 15616475 15616502 -184013648 + AT_rich Low_complexity Low_complexity 1 27 0 538 274 142 47 chr5 15616658 15616997 -184013153 + MLT1J2 LTR MaLR 72 442 -8 227 279 87 19 chr5 15617026 15617130 -184013020 + MIR SINE MIR 117 227 -35 25 51 0 0 chr5 15617236 15617275 -184012875 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr5 15618462 15618487 -184011663 + AT_rich Low_complexity Low_complexity 1 25 0 1352 175 119 26 chr5 15619021 15619409 -184010741 - MLT1C LTR MaLR 0 467 44 1488 236 110 70 chr5 15620520 15621121 -184009029 + MLT1E1 LTR MaLR 1 625 -29 704 276 6 0 chr5 15622077 15622233 -184007917 - MER5A DNA MER1_type -31 158 2 449 269 102 12 chr5 15622468 15622635 -184007515 + MLT1L LTR MaLR 430 611 -4 709 108 0 17 chr5 15623973 15624093 -184006057 + (TTCC)n Simple_repeat Simple_repeat 3 120 0 853 151 0 8 chr5 15624152 15624278 -184005872 + FLAM_C SINE Alu 1 125 -18 1622 118 7 0 chr5 15624522 15624794 -184005356 + L1MA2 LINE L1 6031 6304 0 2168 83 14 3 chr5 15625387 15625675 -184004475 - AluY SINE Alu -20 291 1 207 0 0 0 chr5 15626142 15626165 -184003985 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 2056 189 30 69 chr5 15627107 15627415 -184002735 - MLT1D LTR MaLR 0 505 224 2003 172 12 10 chr5 15627415 15627816 -184002334 - L1MA4 LINE L1 -6 6294 5893 2056 189 30 69 chr5 15627816 15628032 -184002118 - MLT1D LTR MaLR -281 224 1 267 54 0 0 chr5 15629418 15629455 -184000695 + (TG)n Simple_repeat Simple_repeat 2 38 0 216 97 0 0 chr5 15629945 15629976 -184000174 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2422 248 65 16 chr5 15630159 15631064 -183999086 + L1MC3 LINE L1 3884 4833 -1313 1541 130 0 0 chr5 15631044 15631282 -183998868 - L1P4 LINE L1 -452 5716 5479 * 2197 75 0 3 chr5 15631282 15631577 -183998573 + L1PA10 LINE L1 5861 6154 -14 6672 196 54 14 chr5 15631589 15633530 -183996620 + L1MC3 LINE L1 4815 5403 -743 283 191 0 0 chr5 15633530 15633598 -183996552 - LTR66 LTR ERVL -148 462 395 225 116 0 0 chr5 15633561 15633604 -183996546 + LTR66 LTR ERVL 394 436 -174 * 426 145 48 0 chr5 15633619 15633702 -183996448 + L1MC3 LINE L1 6918 7004 -781 * 2014 189 18 73 chr5 15633699 15633970 -183996180 + L1MC3 LINE L1 7220 7442 -343 2035 151 19 24 chr5 15633970 15634347 -183995803 + THE1C LTR MaLR 1 375 0 2014 189 18 73 chr5 15634347 15634674 -183995476 + L1MC3 LINE L1 7442 7785 0 2140 132 48 28 chr5 15634725 15635082 -183995068 + THE1B LTR MaLR 1 364 0 1992 143 6 34 chr5 15635412 15635733 -183994417 + AluSx SINE Alu 1 312 0 817 202 67 29 chr5 15636576 15636784 -183993366 - MER58A DNA MER1_type 0 224 9 200 361 8 54 chr5 15636829 15636959 -183993191 + L2 LINE L2 2938 3061 -211 1398 256 62 22 chr5 15637355 15637904 -183992246 + MLT1F1 LTR MaLR 1 567 0 285 337 43 43 chr5 15637910 15637986 -183992164 - MIR SINE MIR -49 213 138 1700 161 67 78 chr5 15637986 15638422 -183991728 + MSTB1 LTR MaLR 1 431 -1 285 337 43 43 chr5 15638422 15638508 -183991642 - MIR SINE MIR -123 139 51 216 326 134 44 chr5 15640301 15640911 -183989239 - L2 LINE L2 -1291 2023 1359 1906 140 31 0 chr5 15644543 15644835 -183985315 + AluSx SINE Alu 1 301 -11 24 0 0 0 chr5 15645611 15645635 -183984515 + AT_rich Low_complexity Low_complexity 1 24 0 40 21 0 0 chr5 15647386 15647433 -183982717 + AT_rich Low_complexity Low_complexity 1 47 0 3646 98 217 116 chr5 15647837 15649239 -183980911 + pTR5 LTR ERV1 743 2438 0 1540 184 146 82 chr5 15649423 15649944 -183980206 + MLT2B3 LTR ERVL 1 554 0 25 0 0 0 chr5 15650597 15650622 -183979528 + AT_rich Low_complexity Low_complexity 1 25 0 456 279 188 26 chr5 15650970 15651278 -183978872 - L2 LINE L2 0 3313 2956 2917 200 3 2 chr5 15653386 15654021 -183976129 - L1 LINE L1 -1117 5029 4394 364 170 27 125 chr5 15654018 15654130 -183976020 + L1PA16 LINE L1 6057 6157 -9 * 1132 198 46 73 chr5 15654181 15654549 -183975601 + LTR47B LTR ERVL 1 358 -85 2368 97 3 0 chr5 15654586 15654895 -183975255 + AluSx SINE Alu 1 310 -2 362 255 9 19 chr5 15654974 15655080 -183975070 + MIR SINE MIR 31 135 -127 1033 191 84 82 chr5 15656041 15656268 -183973882 + LTR52 LTR ERVL 1 231 -190 1518 64 5 20 chr5 15656268 15656472 -183973678 - L1PA10 LINE L1 -4 6164 5964 1033 191 84 82 chr5 15656472 15656658 -183973492 + LTR52 LTR ERVL 231 415 -6 360 0 0 0 chr5 15656708 15656748 -183973402 + (TTA)n Simple_repeat Simple_repeat 3 42 0 576 62 62 0 chr5 15656748 15656829 -183973321 - L1PA5 LINE L1 -18 6136 6051 641 285 113 88 chr5 15656885 15657947 -183972203 - L1ME LINE L1 -560 5561 4479 24 32 0 0 chr5 15658274 15658305 -183971845 + AT_rich Low_complexity Low_complexity 1 31 0 2318 110 0 0 chr5 15658992 15659293 -183970857 + AluSx SINE Alu 1 301 -11 225 373 60 7 chr5 15659621 15659771 -183970379 - L2 LINE L2 -5 3308 3151 270 0 0 0 chr5 15661554 15661584 -183968566 + (CA)n Simple_repeat Simple_repeat 2 31 0 1534 132 0 0 chr5 15661648 15661868 -183968282 - AluSg/x SINE Alu -10 302 83 488 315 84 60 chr5 15662297 15662748 -183967402 - L2 LINE L2 0 3272 2811 490 272 117 10 chr5 15664976 15665182 -183964968 + MIR SINE MIR 16 243 -19 534 230 105 52 chr5 15665339 15665587 -183964563 + L1MC4a LINE L1 5925 6185 -1623 622 272 24 70 chr5 15665735 15665917 -183964233 - L1MDa LINE L1 -6123 417 259 2323 101 48 31 chr5 15665917 15666275 -183963875 - THE1B LTR MaLR 0 364 1 622 272 24 70 chr5 15666275 15666463 -183963687 - L1MDa LINE L1 -6281 259 64 644 261 55 100 chr5 15666642 15667022 -183963128 - L1MC5 LINE L1 -770 7191 6842 1507 187 21 28 chr5 15667022 15667306 -183962844 - AluJb SINE Alu -26 286 5 644 261 55 100 chr5 15667306 15667474 -183962676 - L1MC5 LINE L1 -1119 6842 6668 1045 269 37 50 chr5 15668108 15668650 -183961500 - L1MC5 LINE L1 -2019 5789 5255 412 271 42 42 chr5 15670137 15670480 -183959670 - MLT1J1 LTR MaLR 0 446 63 1141 212 58 69 chr5 15670979 15671441 -183958709 + LTR16A1 LTR ERVL 1 457 0 210 301 150 9 chr5 15673058 15673171 -183956979 + L2 LINE L2 3185 3313 0 22 0 0 0 chr5 15673227 15673249 -183956901 + AT_rich Low_complexity Low_complexity 1 22 0 210 71 0 0 chr5 15673398 15673426 -183956724 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 1996 118 50 68 chr5 15673727 15674109 -183956041 + THE1C LTR MaLR 1 375 0 189 317 8 98 chr5 15674556 15674632 -183955518 - MIR SINE MIR -41 221 159 1657 170 60 7 chr5 15674632 15674914 -183955236 - AluJo SINE Alu -7 305 9 189 317 8 98 chr5 15674914 15674960 -183955190 - MIR SINE MIR -103 159 110 262 408 0 0 chr5 15675208 15675311 -183954839 - L2 LINE L2 -25 3247 3145 657 191 77 10 chr5 15675335 15675544 -183954606 - MER69 DNA AcHobo -10 2516 2294 1324 166 40 68 chr5 15675854 15676150 -183954000 + AluJb SINE Alu 18 305 -7 5463 96 13 6 chr5 15676594 15677257 -183952893 + L1MA3 LINE L1 5260 6285 -20 5463 117 15 9 chr5 15677257 15678128 -183952022 + L1MA3 LINE L1 5421 6297 -8 5463 96 13 6 chr5 15678128 15678142 -183952008 + L1MA3 LINE L1 6285 6297 -8 241 253 182 0 chr5 15678216 15678386 -183951764 + HAL1 LINE L1 1249 1449 -1058 307 280 84 21 chr5 15678433 15678576 -183951574 + HAL1 LINE L1 1523 1674 -833 515 281 8 48 chr5 15678577 15678826 -183951324 + HAL1 LINE L1 2252 2490 -17 183 374 24 0 chr5 15681233 15681316 -183948834 - MIR SINE MIR -176 86 2 364 307 93 0 chr5 15681625 15681765 -183948385 - MIR3 SINE MIR -12 196 44 2209 111 7 3 chr5 15681773 15682070 -183948080 - AluSx SINE Alu -14 298 1 1550 182 69 21 chr5 15682619 15682910 -183947240 + AluJb SINE Alu 1 305 -7 853 116 0 0 chr5 15683097 15683218 -183946932 + L1PA8 LINE L1 11 131 -6330 * 6884 120 12 17 chr5 15683211 15688850 -183941300 + L1PA8 LINE L1 768 6472 -15 211 353 0 14 chr5 15689105 15689191 -183940959 - MIR SINE MIR -46 162 77 266 280 0 21 chr5 15689923 15690016 -183940134 + L2 LINE L2 1928 2018 -1296 240 330 52 21 chr5 15690024 15690121 -183940029 + L2 LINE L2 2439 2538 -776 200 209 0 0 chr5 15690144 15690187 -183939963 + (CTAGT)n Simple_repeat Simple_repeat 5 47 0 374 354 38 14 chr5 15690191 15690403 -183939747 + L2 LINE L2 2544 2760 -554 3259 173 74 28 chr5 15691193 15691920 -183938230 + LTR48 LTR ERV1 27 787 0 204 200 18 18 chr5 15692935 15692990 -183937160 + (TTTA)n Simple_repeat Simple_repeat 1 55 0 2088 181 36 90 chr5 15695299 15695885 -183934265 - MLT2B3 LTR ERVL 0 554 1 1033 104 38 47 chr5 15695908 15696165 -183933985 + L1PB4 LINE L1 5163 5419 -762 3328 166 48 21 chr5 15696287 15696997 -183933153 + L1PB4 LINE L1 5427 6155 -1 1461 181 0 19 chr5 15697004 15697264 -183932886 + AluJo SINE Alu 42 296 -16 2174 113 0 0 chr5 15697765 15698041 -183932109 + AluSc SINE Alu 1 279 -30 207 0 0 0 chr5 15698041 15698064 -183932086 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2174 113 0 0 chr5 15698064 15698079 -183932071 + AluSc SINE Alu 278 292 -17 2167 137 0 0 chr5 15698334 15698640 -183931510 + AluSx SINE Alu 1 306 -6 290 278 56 0 chr5 15698868 15698940 -183931210 - L2 LINE L2 -46 3226 3151 1881 180 8 8 chr5 15698989 15699350 -183930800 - MLT1A1 LTR MaLR -3 362 2 228 343 59 62 chr5 15699457 15699778 -183930372 - L2 LINE L2 -919 2395 2076 4661 165 30 25 chr5 15699783 15701402 -183928748 + L1PA15 LINE L1 4532 6165 0 319 340 93 15 chr5 15701403 15701662 -183928488 - L2 LINE L2 -1246 2068 1790 891 270 102 47 chr5 15701988 15702480 -183927670 + LTR33A LTR ERVL 1 519 -4 248 68 0 23 chr5 15702548 15702592 -183927558 + (TG)n Simple_repeat Simple_repeat 2 44 0 774 271 0 0 chr5 15702593 15702770 -183927380 + MER8 DNA MER2_type 1 177 -62 375 185 0 0 chr5 15702805 15702870 -183927280 - Tigger2 DNA MER2_type -2649 69 5 21 36 0 0 chr5 15702944 15702972 -183927178 + AT_rich Low_complexity Low_complexity 1 28 0 191 320 24 40 chr5 15703483 15703608 -183926542 + MER5A DNA MER1_type 63 185 -4 2076 125 42 33 chr5 15703851 15704212 -183925938 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr5 15704452 15704473 -183925677 + AT_rich Low_complexity Low_complexity 1 21 0 212 83 0 28 chr5 15704525 15704561 -183925589 + (TTTC)n Simple_repeat Simple_repeat 3 37 0 314 141 0 16 chr5 15704862 15704926 -183925224 + (TTCC)n Simple_repeat Simple_repeat 2 64 0 248 216 21 93 chr5 15704940 15705037 -183925113 - L2 LINE L2 -66 3247 3158 234 281 16 0 chr5 15705105 15705169 -183924981 - L2 LINE L2 -970 2344 2280 1586 138 11 0 chr5 15705191 15705466 -183924684 + L1MA8 LINE L1 5528 5805 -486 27 0 0 0 chr5 15705470 15705497 -183924653 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr5 15705522 15705545 -183924605 + AT_rich Low_complexity Low_complexity 1 23 0 1573 46 0 0 chr5 15705526 15705720 -183924430 - L1PA4 LINE L1 0 6155 5962 2255 172 28 15 chr5 15705722 15706188 -183923962 + L1MA8 LINE L1 5815 6286 -5 360 70 35 0 chr5 15706838 15706895 -183923255 + MADE1 DNA Mariner 22 80 0 1929 128 11 4 chr5 15707868 15708149 -183922001 - AluSx SINE Alu -27 285 3 371 258 11 0 chr5 15708871 15708960 -183921190 - MIR SINE MIR -172 90 1 27 29 0 0 chr5 15709700 15709734 -183920416 + AT_rich Low_complexity Low_complexity 1 34 0 26 98 0 0 chr5 15710156 15710238 -183919912 + AT_rich Low_complexity Low_complexity 1 82 0 2708 118 7 41 chr5 15710387 15710829 -183919321 + MSTA LTR MaLR 1 427 -1 762 305 34 17 chr5 15711731 15711970 -183918180 - MIR SINE MIR -17 245 3 904 298 127 26 chr5 15713122 15713622 -183916528 - L2 LINE L2 0 3313 2764 405 271 69 78 chr5 15713651 15713869 -183916281 - MLT1J LTR MaLR -40 471 256 297 344 60 33 chr5 15715770 15715953 -183914197 + MIR SINE MIR 22 209 -53 1986 157 31 9 chr5 15715955 15716305 -183913845 + THE1B LTR MaLR 5 362 -2 2418 204 32 6 chr5 15716334 15716833 -183913317 - MLT2B1 LTR ERVL -8 512 1 573 289 124 30 chr5 15717076 15717277 -183912873 + MIR SINE MIR 25 244 -18 621 219 7 7 chr5 15717315 15717466 -183912684 - MLT2E LTR ERVL -6 622 472 469 236 172 6 chr5 15717547 15717704 -183912446 - MLT2E LTR ERVL -415 213 31 747 250 37 14 chr5 15717755 15717971 -183912179 - LTR16C LTR ERVL 0 491 271 429 344 69 45 chr5 15718252 15718543 -183911607 + L2 LINE L2 2970 3267 -5 234 265 0 0 chr5 15718543 15718592 -183911558 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 350 317 49 75 chr5 15718755 15719020 -183911130 - MIR SINE MIR 0 262 5 2177 133 8 37 chr5 15719718 15720093 -183910057 + THE1B LTR MaLR 1 364 0 11454 92 17 3 chr5 15720093 15721650 -183908500 + THE1B-int LTR MaLR 1 1580 0 2189 134 8 35 chr5 15721650 15722024 -183908126 + THE1B LTR MaLR 1 364 0 1022 247 30 13 chr5 15722104 15722339 -183907811 + MIR SINE MIR 23 261 -1 25 0 0 0 chr5 15723161 15723186 -183906964 + AT_rich Low_complexity Low_complexity 1 25 0 517 312 177 48 chr5 15723500 15723606 -183906544 - L2 LINE L2 -353 2961 2870 1925 164 0 10 chr5 15723606 15723904 -183906246 + AluSx SINE Alu 1 295 -17 517 312 177 48 chr5 15723904 15724663 -183905487 - L2 LINE L2 -444 2870 1985 284 48 24 0 chr5 15725559 15725601 -183904549 + (CA)n Simple_repeat Simple_repeat 2 44 0 262 256 207 0 chr5 15725666 15725748 -183904402 + L2 LINE L2 3157 3255 -17 207 293 19 47 chr5 15725954 15726060 -183904090 + MIR SINE MIR 31 133 -129 21 36 0 0 chr5 15726251 15726279 -183903871 + AT_rich Low_complexity Low_complexity 1 28 0 216 298 0 0 chr5 15726375 15726422 -183903728 - MIR SINE MIR -168 94 48 417 205 34 29 chr5 15726464 15726489 -183903661 + L1ME3A LINE L1 5343 5366 -765 2134 101 3 7 chr5 15726489 15726787 -183903363 + AluY SINE Alu 1 297 -14 417 205 34 29 chr5 15726787 15726924 -183903226 + L1ME3A LINE L1 5366 5495 -636 446 313 8 8 chr5 15727400 15727531 -183902619 - MER5B DNA MER1_type 0 178 48 1509 234 87 15 chr5 15727532 15728074 -183902076 + L1ME3A LINE L1 5505 6085 -85 399 281 33 0 chr5 15728080 15728201 -183901949 - MER90 LTR ERV1 0 575 451 43 0 0 0 chr5 15729612 15729655 -183900495 + AT_rich Low_complexity Low_complexity 1 43 0 231 190 0 0 chr5 15729681 15729739 -183900411 + T-rich Low_complexity Low_complexity 1 58 0 2035 216 29 86 chr5 15730432 15731057 -183899093 - MLT1E LTR MaLR 0 593 5 1720 38 0 0 chr5 15731208 15731418 -183898732 + L1PA4 LINE L1 5946 6155 0 402 267 67 0 chr5 15732107 15732212 -183897938 - MIR SINE MIR -70 192 81 288 0 0 0 chr5 15733712 15733744 -183896406 + (CA)n Simple_repeat Simple_repeat 1 32 0 262 235 29 39 chr5 15734082 15734184 -183895966 + GA-rich Low_complexity Low_complexity 1 101 0 22 0 0 0 chr5 15734768 15734790 -183895360 + AT_rich Low_complexity Low_complexity 1 22 0 455 299 118 16 chr5 15735721 15735908 -183894242 + MIR SINE MIR 34 239 -23 209 348 116 34 chr5 15736543 15736750 -183893400 + L2 LINE L2 3025 3248 -24 1536 298 58 12 chr5 15737085 15737676 -183892474 + L1M4b LINE L1 -302 315 -6231 513 288 33 66 chr5 15737677 15737951 -183892199 + L1M4b LINE L1 368 632 -5914 1157 204 21 71 chr5 15738564 15738942 -183891208 + L1M4b LINE L1 892 1250 -5296 2345 164 36 4 chr5 15738944 15739247 -183890903 - L1P4 LINE L1 -557 5604 5312 1987 42 23 8 chr5 15739247 15739509 -183890641 - L1PA4 LINE L1 -3 6152 5887 2345 164 36 4 chr5 15739509 15739939 -183890211 - L1P4 LINE L1 -849 5312 4851 1377 111 0 18 chr5 15739939 15740162 -183889988 + L1PA13 LINE L1 5943 6163 0 446 158 55 24 chr5 15740162 15740289 -183889861 + L1M4b LINE L1 1237 1367 -5179 2186 197 22 9 chr5 15740295 15740575 -183889575 - MLT1C LTR MaLR 0 467 177 3353 80 18 7 chr5 15740575 15741023 -183889127 - MLT2A2 LTR ERVL 0 453 1 2186 197 22 9 chr5 15741023 15741203 -183888947 - MLT1C LTR MaLR -290 177 1 332 213 0 54 chr5 15741209 15741324 -183888826 + L1M4b LINE L1 1366 1582 -5062 405 258 55 20 chr5 15741331 15741347 -183888803 + L1M4b LINE L1 1408 1422 -5143 1782 157 67 14 chr5 15741347 15741703 -183888447 - THE1C LTR MaLR 0 375 1 405 258 55 20 chr5 15741703 15741882 -183888268 + L1M4b LINE L1 1422 2002 -4563 2356 49 0 7 chr5 15742125 15742461 -183887689 + AluY SINE Alu 1 334 0 297 267 103 26 chr5 15743684 15743800 -183886350 + MIR SINE MIR 68 192 -70 1285 190 16 71 chr5 15744035 15744330 -183885820 - AluJo SINE Alu -19 293 14 2300 98 47 36 chr5 15744330 15744689 -183885461 + THE1B LTR MaLR 2 364 0 1285 190 16 71 chr5 15744689 15744703 -183885447 - AluJo SINE Alu -298 14 1 512 234 120 33 chr5 15745547 15745731 -183884419 + MIR SINE MIR 13 212 -50 377 319 0 0 chr5 15745782 15745876 -183884274 - MER5A DNA MER1_type -84 105 12 414 39 0 0 chr5 15745940 15745992 -183884158 + (ATG)n Simple_repeat Simple_repeat 1 52 0 1568 206 124 16 chr5 15746140 15746591 -183883559 + MLT1D LTR MaLR 6 505 0 769 188 0 8 chr5 15746783 15746916 -183883234 + MER2 DNA MER2_type 1 132 -213 409 224 0 0 chr5 15746969 15747045 -183883105 + MER2 DNA MER2_type 267 342 -3 2039 235 87 17 chr5 15747457 15747901 -183882249 + L1M4b LINE L1 2008 2420 -4224 2171 186 104 8 chr5 15747901 15748370 -183881780 - MER67D LTR ERV1 0 514 1 2039 235 87 17 chr5 15748370 15748889 -183881261 + L1M4b LINE L1 2420 2988 -3656 436 296 66 13 chr5 15748904 15749056 -183881094 + MER5A DNA MER1_type 30 189 0 1548 117 17 176 chr5 15749389 15749792 -183880358 - MER44D DNA MER2_type 0 609 1 414 237 178 13 chr5 15749801 15749953 -183880197 - MER5B DNA MER1_type 0 178 2 1871 168 31 11 chr5 15750412 15750770 -183879380 - MLT1A1 LTR MaLR 0 365 1 457 292 46 29 chr5 15750898 15751110 -183879040 - MIR SINE MIR -44 218 2 1775 82 50 14 chr5 15754929 15755210 -183874940 - L1MA3 LINE L1 0 6305 6015 225 313 72 0 chr5 15755635 15755718 -183874432 + L2 LINE L2 2996 3084 -229 975 154 0 0 chr5 15756132 15756294 -183873856 + L1MA6 LINE L1 6134 6295 -5 599 165 23 23 chr5 15756309 15756442 -183873708 + L1MA7 LINE L1 6156 6288 -3 1645 155 120 29 chr5 15756656 15756998 -183873152 + THE1C LTR MaLR 1 373 -2 9762 131 47 36 chr5 15757002 15758563 -183871587 + THE1C-int LTR MaLR 3 1580 0 1925 131 57 41 chr5 15758565 15758932 -183871218 + THE1C LTR MaLR 3 375 0 276 284 52 52 chr5 15758982 15759098 -183871052 + L2 LINE L2 3157 3272 0 244 314 57 0 chr5 15760448 15760553 -183869597 - L1ME LINE L1 -498 5623 5513 23 78 0 0 chr5 15760584 15760635 -183869515 + AT_rich Low_complexity Low_complexity 1 51 0 684 205 60 7 chr5 15762105 15762256 -183867894 - MER69A DNA AcHobo 0 177 19 1004 196 37 28 chr5 15762773 15762987 -183867163 + MER20 DNA MER1_type 3 218 -1 460 275 60 30 chr5 15764118 15764318 -183865832 - MIR SINE MIR -54 208 3 581 302 53 26 chr5 15764815 15765004 -183865146 + MIR SINE MIR 51 244 -18 192 158 0 0 chr5 15765044 15765082 -183865068 + (CA)n Simple_repeat Simple_repeat 1 38 0 265 167 0 0 chr5 15765085 15765133 -183865017 - MER4-int LTR ERV1 -5442 1156 1109 202 220 17 51 chr5 15766562 15766621 -183863529 - L2 LINE L2 -2 3311 3255 1850 216 36 13 chr5 15767134 15767518 -183862632 + MSTD LTR MaLR 4 396 0 3207 208 40 3 chr5 15767577 15768198 -183861952 + MER82 DNA MER2_type 2 645 -8 328 326 57 14 chr5 15768206 15768347 -183861803 + L2 LINE L2 3161 3307 -6 399 361 116 20 chr5 15768359 15768661 -183861489 + L2 LINE L2 2942 3272 0 2228 116 0 7 chr5 15768667 15768968 -183861182 + AluSg SINE Alu 1 299 -11 183 309 56 71 chr5 15771903 15772029 -183858121 - L2 LINE L2 -811 2503 2380 348 307 58 117 chr5 15772271 15772515 -183857635 + L2 LINE L2 237 494 -2820 787 255 57 9 chr5 15772515 15772727 -183857423 - MIR SINE MIR -34 228 7 348 307 58 117 chr5 15772727 15772906 -183857244 + L2 LINE L2 494 834 -2480 270 293 73 37 chr5 15773086 15773320 -183856830 + MLT1J2 LTR MaLR 66 313 -133 2253 131 25 68 chr5 15773990 15774244 -183855906 + L1MA8 LINE L1 5865 6093 -198 2267 87 3 10 chr5 15774244 15774543 -183855607 - AluY SINE Alu -14 297 1 2253 131 25 68 chr5 15774543 15774732 -183855418 + L1MA8 LINE L1 6093 6289 -2 1442 208 46 74 chr5 15774847 15775308 -183854842 + MLT1C LTR MaLR 4 451 -16 3931 163 32 60 chr5 15776108 15776914 -183853236 + LTR1 LTR ERV1 1 784 -1 406 313 30 8 chr5 15777006 15777137 -183853013 + MIR SINE MIR 25 158 -104 207 139 0 0 chr5 15777721 15777757 -183852393 + (A)n Simple_repeat Simple_repeat 1 36 0 288 210 0 32 chr5 15778055 15778117 -183852033 - L2 LINE L2 0 3313 3254 40 21 0 0 chr5 15778618 15778665 -183851485 + AT_rich Low_complexity Low_complexity 1 47 0 258 57 0 0 chr5 15778676 15778711 -183851439 + L1MA1 LINE L1 6148 6182 -120 897 263 11 4 chr5 15778782 15779044 -183851106 + L1P5 LINE L1 7 270 -6593 * 1940 184 25 5 chr5 15779043 15779649 -183850501 + L1P5 LINE L1 901 1701 -5162 10022 186 26 14 chr5 15779658 15782357 -183847793 + L1P5 LINE L1 3774 6506 -361 261 214 0 82 chr5 15782371 15782469 -183847681 + L1MC4 LINE L1 6614 6703 -1339 348 248 0 0 chr5 15782479 15782628 -183847522 + (TA)n Simple_repeat Simple_repeat 2 150 0 305 287 0 21 chr5 15782630 15782724 -183847426 - L1MC4 LINE L1 -1336 6706 6615 * 323 241 23 23 chr5 15782649 15782736 -183847414 + L1MC4 LINE L1 6616 6702 -1340 2527 126 11 0 chr5 15782736 15783100 -183847050 + L1PB1 LINE L1 5782 6149 -2 316 265 29 0 chr5 15784328 15784430 -183845720 + (CAGAGA)n Simple_repeat Simple_repeat 1 105 0 1292 158 48 0 chr5 15785034 15785243 -183844907 + MER20 DNA MER1_type 1 219 0 26 30 0 0 chr5 15787258 15787291 -183842859 + AT_rich Low_complexity Low_complexity 1 33 0 277 267 118 30 chr5 15787474 15787609 -183842541 - MIR3 SINE MIR -41 167 21 539 282 20 0 chr5 15788628 15788777 -183841373 + HAL1 LINE L1 1 152 -2355 340 225 12 25 chr5 15788782 15788862 -183841288 + HAL1 LINE L1 195 273 -2234 721 282 89 4 chr5 15788867 15789115 -183841035 + HAL1 LINE L1 425 693 -1814 1469 171 87 7 chr5 15789636 15789922 -183840228 - AluJb SINE Alu -1 311 3 1353 228 54 0 chr5 15792796 15793094 -183837056 - MER58B DNA MER1_type -27 314 1 2389 147 39 0 chr5 15793443 15793832 -183836318 + MSTB-int LTR MaLR 1248 1651 0 2857 129 55 0 chr5 15793832 15794234 -183835916 + MSTB LTR MaLR 1 424 -2 382 300 36 122 chr5 15794248 15794641 -183835509 - L2 LINE L2 0 3272 2914 2098 122 7 0 chr5 15794914 15795202 -183834948 - AluSg SINE Alu -20 290 1 253 311 126 38 chr5 15795479 15795662 -183834488 - L2 LINE L2 -510 2804 2606 28 61 0 0 chr5 15796675 15796724 -183833426 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr5 15797028 15797050 -183833100 + AT_rich Low_complexity Low_complexity 1 22 0 221 265 0 0 chr5 15798249 15798298 -183831852 + GA-rich Low_complexity Low_complexity 3 51 0 23 0 0 0 chr5 15798812 15798835 -183831315 + AT_rich Low_complexity Low_complexity 1 23 0 219 325 197 21 chr5 15799017 15799205 -183830945 + MIR SINE MIR 30 250 -12 2054 80 0 0 chr5 15799680 15799953 -183830197 - AluY SINE Alu 0 304 32 2159 97 13 13 chr5 15799956 15800254 -183829896 - AluSp SINE Alu -15 298 1 215 195 39 65 chr5 15800996 15801073 -183829077 - MIR3 SINE MIR -4 204 130 1589 192 49 3 chr5 15801102 15801389 -183828761 + AluJo SINE Alu 1 300 -12 1456 188 19 58 chr5 15801420 15801626 -183828524 - MLT1A1 LTR MaLR -17 348 160 2180 100 3 10 chr5 15801626 15801917 -183828233 - AluSx SINE Alu -21 291 3 1456 188 19 58 chr5 15801917 15802072 -183828078 - MLT1A1 LTR MaLR -205 160 1 382 308 178 0 chr5 15802326 15802495 -183827655 - MIR SINE MIR -1 261 63 216 238 0 0 chr5 15802950 15803013 -183827137 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 1629 186 34 40 chr5 15803232 15803610 -183826540 + MLT1A2 LTR MaLR 1 467 0 499 304 54 87 chr5 15803781 15804229 -183825921 + L2 LINE L2 2868 3300 -13 24 0 0 0 chr5 15805331 15805355 -183824795 + AT_rich Low_complexity Low_complexity 1 24 0 1957 96 0 99 chr5 15805655 15805977 -183824173 - AluSq SINE Alu -23 290 1 986 114 8 0 chr5 15806893 15807025 -183823125 + AluSq/x SINE Alu 1 133 -179 2002 148 0 16 chr5 15807030 15807347 -183822803 + AluSx SINE Alu 1 312 0 28 0 0 0 chr5 15807483 15807511 -183822639 + AT_rich Low_complexity Low_complexity 1 28 0 2102 137 16 26 chr5 15808430 15808809 -183821341 + THE1C LTR MaLR 1 375 0 1907 252 96 17 chr5 15809122 15809758 -183820392 + L2 LINE L2 2203 2888 -426 503 200 350 0 chr5 15809770 15809910 -183820240 - MER5A DNA MER1_type 0 189 1 * 852 271 121 31 chr5 15809910 15810291 -183819859 + L2 LINE L2 2898 3313 0 319 311 110 26 chr5 15811020 15811240 -183818910 + MIR SINE MIR 16 251 -11 287 96 19 0 chr5 15812426 15812478 -183817672 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 6471 109 23 21 chr5 15812580 15813887 -183816263 + L1MA5A LINE L1 4993 6297 0 21 57 0 0 chr5 15815085 15815120 -183815030 + AT_rich Low_complexity Low_complexity 1 35 0 10136 35 8 1 chr5 15816146 15818154 -183811996 - L1PA5 LINE L1 -8 6146 4128 204 97 0 0 chr5 15818763 15818794 -183811356 + (TTG)n Simple_repeat Simple_repeat 3 33 0 226 278 19 0 chr5 15819223 15819277 -183810873 + L3 LINE CR1 1519 1573 -4 211 292 0 0 chr5 15819304 15819352 -183810798 + polypurine Low_complexity Low_complexity 6 53 0 21 57 0 0 chr5 15820511 15820546 -183809604 + AT_rich Low_complexity Low_complexity 1 35 0 222 195 0 0 chr5 15820672 15820713 -183809437 + GA-rich Low_complexity Low_complexity 4 44 0 1620 179 50 52 chr5 15820767 15821187 -183808963 - LTR52 LTR ERVL -2 419 1 1640 115 70 25 chr5 15821658 15821972 -183808178 + MER46B DNA MER2_type 33 235 -1 397 138 0 106 chr5 15823270 15823364 -183806786 - L1PA10 LINE L1 0 6168 6085 2083 117 4 4 chr5 15823807 15824088 -183806062 - AluSp SINE Alu -32 281 1 304 239 54 15 chr5 15824365 15824495 -183805655 + L1ME4a LINE L1 5741 5875 -246 5529 94 5 4 chr5 15825783 15826608 -183803542 - L1PA13 LINE L1 0 6163 5338 1039 165 30 9 chr5 15826614 15826844 -183803306 + L1PA13 LINE L1 5122 5356 -790 235 257 0 40 chr5 15827102 15827176 -183802974 - MER69 DNA AcHobo 0 2526 2456 1785 150 34 0 chr5 15827312 15827579 -183802571 + AluJb SINE Alu 5 280 -32 216 0 0 0 chr5 15827579 15827603 -183802547 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 556 246 126 6 chr5 15828281 15828464 -183801686 - MER58C DNA MER1_type -2 213 9 31 0 0 0 chr5 15829300 15829331 -183800819 + AT_rich Low_complexity Low_complexity 1 31 0 532 291 59 25 chr5 15829361 15829564 -183800586 + MIR SINE MIR 53 262 0 1201 101 9 85 chr5 15830399 15830715 -183799435 + AluY SINE Alu 1 292 -19 785 258 155 15 chr5 15833332 15834027 -183796123 + L1ME3 LINE L1 5004 5787 -383 1539 204 45 47 chr5 15834040 15834462 -183795688 - MER63B DNA MER1_type -10 426 6 923 247 57 22 chr5 15834468 15834837 -183795313 + L1ME3 LINE L1 5781 6162 0 2237 115 0 3 chr5 15836315 15836620 -183793530 - AluSx SINE Alu -8 304 1 226 324 65 14 chr5 15836647 15836786 -183793364 - L2 LINE L2 -1455 1859 1714 1927 140 70 22 chr5 15837317 15837675 -183792475 + THE1C LTR MaLR 1 375 0 463 336 7 7 chr5 15837783 15837929 -183792221 - MIR3 SINE MIR -36 172 27 808 59 0 0 chr5 15838435 15838537 -183791613 - AluY SINE Alu -4 307 206 801 201 41 55 chr5 15839687 15839906 -183790244 - MER20 DNA MER1_type -1 218 3 187 283 22 0 chr5 15842991 15843037 -183787113 - L2 LINE L2 -252 3061 3015 385 296 228 29 chr5 15843152 15843744 -183786406 - L2 LINE L2 -448 2866 2157 457 124 41 28 chr5 15844574 15844719 -183785431 + (TAGA)n Simple_repeat Simple_repeat 3 149 0 281 316 53 23 chr5 15844719 15844852 -183785298 + MIR3 SINE MIR 21 157 -51 190 303 71 30 chr5 15845048 15845147 -183785003 - MER5B DNA MER1_type -45 133 31 897 135 11 17 chr5 15847641 15847819 -183782331 + GA-rich Low_complexity Low_complexity 4 180 0 329 265 112 39 chr5 15848139 15848338 -183781812 + MIR SINE MIR 2 216 -46 305 314 126 42 chr5 15849185 15849446 -183780704 + L2 LINE L2 2808 3090 -182 198 182 30 121 chr5 15849587 15849653 -183780497 + L2 LINE L2 3253 3312 -1 2340 114 14 3 chr5 15850636 15850987 -183779163 + THE1A LTR MaLR 1 355 0 228 274 53 32 chr5 15853737 15853832 -183776318 + L3 LINE CR1 1478 1574 -3 2432 111 28 8 chr5 15854107 15854579 -183775571 - MER1A DNA MER1_type 0 529 2 1517 188 21 3 chr5 15854685 15855010 -183775140 - L1MB3 LINE L1 -2 6181 5851 1576 123 68 0 chr5 15856170 15856406 -183773744 + AluSx SINE Alu 43 294 -18 189 250 0 0 chr5 15857650 15857698 -183772452 - L2 LINE L2 0 3313 3266 4029 81 9 4 chr5 15858985 15859570 -183770580 + L1PA14 LINE L1 5327 5913 -248 2099 119 19 25 chr5 15859571 15859933 -183770217 + THE1C LTR MaLR 15 374 -1 1884 86 0 0 chr5 15859933 15860189 -183769961 + L1PA14 LINE L1 5906 6161 0 22 0 0 0 chr5 15860194 15860216 -183769934 + AT_rich Low_complexity Low_complexity 1 22 0 23 68 0 0 chr5 15860665 15860709 -183769441 + AT_rich Low_complexity Low_complexity 1 44 0 22 70 0 0 chr5 15861014 15861057 -183769093 + AT_rich Low_complexity Low_complexity 1 43 0 2329 60 0 7 chr5 15863785 15864092 -183766058 + AluY SINE Alu 1 305 0 18712 55 1 7 chr5 15864133 15867319 -183762831 + L1PA6 LINE L1 2970 6153 -1 2009 117 33 0 chr5 15867832 15868166 -183761984 - AluSx SINE Alu 0 343 1 1025 160 0 11 chr5 15868782 15868969 -183761181 - Tigger4(Zombi) DNA MER2_type 0 2731 2547 33 0 0 0 chr5 15869023 15869056 -183761094 + AT_rich Low_complexity Low_complexity 1 33 0 254 149 0 0 chr5 15869060 15869107 -183761043 - Tigger4(Zombi) DNA MER2_type -191 2540 2494 1280 165 41 0 chr5 15869113 15869355 -183760795 - Tigger4(Zombi) DNA MER2_type -2479 252 1 417 253 63 76 chr5 15869962 15870120 -183760030 + L2 LINE L2 3158 3313 0 365 293 66 82 chr5 15870121 15870184 -183759966 + L2 LINE L2 2444 2506 -808 2310 128 103 5 chr5 15870184 15870574 -183759576 + MSTA LTR MaLR 1 428 0 365 293 66 82 chr5 15870574 15870827 -183759323 + L2 LINE L2 2506 2755 -559 22 0 0 0 chr5 15871162 15871184 -183758966 + AT_rich Low_complexity Low_complexity 1 22 0 236 317 98 32 chr5 15871760 15871883 -183758267 - MER91C DNA MER1_type -9 131 1 203 432 0 0 chr5 15871887 15871975 -183758175 + MIR SINE MIR 31 118 -90 221 258 22 22 chr5 15871999 15872088 -183758062 + (TA)n Simple_repeat Simple_repeat 1 89 0 24 0 0 0 chr5 15872265 15872289 -183757861 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 15873187 15873209 -183756941 + AT_rich Low_complexity Low_complexity 1 22 0 312 229 110 18 chr5 15873273 15873382 -183756768 + MER94 DNA DNA 3 121 -13 249 265 1 27 chr5 15874099 15874174 -183755976 + MER21B LTR ERV1 24 125 -480 2183 119 0 0 chr5 15874318 15874611 -183755539 + AluSc SINE Alu 1 293 -16 1025 271 53 46 chr5 15874625 15875056 -183755094 + MER21B LTR ERV1 254 687 -176 1853 181 16 5 chr5 15876873 15877051 -183753099 + MLT1B LTR MaLR 1 176 -214 2321 114 13 0 chr5 15877051 15877359 -183752791 + AluSx SINE Alu 1 312 0 1853 181 16 5 chr5 15877359 15877561 -183752589 + MLT1B LTR MaLR 176 385 -5 2404 46 0 3 chr5 15877781 15878064 -183752086 + AluY SINE Alu 1 282 -29 22 0 0 0 chr5 15878517 15878539 -183751611 + AT_rich Low_complexity Low_complexity 1 22 0 2312 68 0 43 chr5 15879562 15879884 -183750266 + AluY SINE Alu 1 308 -3 3327 113 91 4 chr5 15879888 15880448 -183749702 + L1MA3 LINE L1 5697 6305 0 945 272 41 0 chr5 15881023 15881269 -183748881 - MIR SINE MIR -1 261 6 1936 177 0 0 chr5 15881409 15881708 -183748442 - AluJb SINE Alu -13 299 1 277 349 23 16 chr5 15882568 15882697 -183747453 - MER5B DNA MER1_type -48 130 1 21 0 0 0 chr5 15883132 15883153 -183746997 + AT_rich Low_complexity Low_complexity 1 21 0 181 222 0 44 chr5 15883746 15883791 -183746359 - L2 LINE L2 -2894 420 378 722 250 282 0 chr5 15884164 15884480 -183745670 - L2 LINE L2 -1 3312 2908 830 205 21 7 chr5 15884486 15884732 -183745418 + MLT1A1 LTR MaLR 5 334 -31 791 286 99 40 chr5 15884865 15885362 -183744788 - L2 LINE L2 -986 2328 1803 1150 95 0 0 chr5 15887419 15887567 -183742583 + AluSg SINE Alu 1 148 -162 477 299 120 0 chr5 15889079 15889263 -183740887 + MIR SINE MIR 47 252 -10 2388 83 0 7 chr5 15889645 15889947 -183740203 + AluSg SINE Alu 1 300 -10 798 112 112 22 chr5 15890002 15890180 -183739970 + L1MB3 LINE L1 5988 6181 -2 633 316 30 30 chr5 15890506 15890740 -183739410 - MIR SINE MIR -26 236 3 22 35 0 0 chr5 15890765 15890794 -183739356 + AT_rich Low_complexity Low_complexity 1 29 0 1457 205 47 10 chr5 15890887 15891184 -183738966 - AluJo SINE Alu -4 308 1 1984 157 3 3 chr5 15891341 15891653 -183738497 - AluJb SINE Alu 0 312 1 24 0 0 0 chr5 15892638 15892662 -183737488 + AT_rich Low_complexity Low_complexity 1 24 0 25 65 0 0 chr5 15892768 15892814 -183737336 + AT_rich Low_complexity Low_complexity 1 46 0 3331 142 13 31 chr5 15894065 15894164 -183735986 + L1MB2 LINE L1 5569 5668 -503 1903 150 7 7 chr5 15894164 15894444 -183735706 + AluSx SINE Alu 2 281 -31 270 0 0 0 chr5 15894450 15894480 -183735670 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 3331 142 13 31 chr5 15894480 15894987 -183735163 + L1MB2 LINE L1 5673 6171 0 2626 102 11 5 chr5 15895467 15895838 -183734312 + THE1C LTR MaLR 1 373 -2 3875 108 65 76 chr5 15895838 15896589 -183733561 + THE1C-int LTR MaLR 4 746 -834 1512 88 5 5 chr5 15896589 15896806 -183733344 + THE1C-int LTR MaLR 1364 1580 0 2621 102 16 5 chr5 15896806 15897177 -183732973 + THE1C LTR MaLR 1 375 0 1908 250 37 47 chr5 15897536 15898107 -183732043 + MLT1E LTR MaLR 29 593 0 21 0 0 0 chr5 15898416 15898437 -183731713 + AT_rich Low_complexity Low_complexity 1 21 0 392 229 83 14 chr5 15900074 15900218 -183729932 + MER103 DNA DNA 4 157 -9 343 264 101 27 chr5 15900929 15901099 -183729051 - MIR SINE MIR -52 210 30 946 92 0 14 chr5 15901124 15901266 -183728884 + L1PA13 LINE L1 6023 6162 -1 269 321 75 0 chr5 15901739 15901845 -183728305 + L2 LINE L2 3197 3310 -3 2249 107 0 13 chr5 15902262 15902561 -183727589 + AluSg SINE Alu 1 295 -15 266 254 105 27 chr5 15902662 15902786 -183727364 - MIR3 SINE MIR -49 159 25 21 0 0 0 chr5 15903330 15903351 -183726799 + AT_rich Low_complexity Low_complexity 1 21 0 241 232 18 0 chr5 15903594 15903650 -183726500 - L2 LINE L2 -1 3312 3256 717 279 135 22 chr5 15903673 15904119 -183726031 - L2 LINE L2 -219 3094 2590 1937 112 22 0 chr5 15904127 15904394 -183725756 + AluSx SINE Alu 22 294 -18 3247 153 44 10 chr5 15904396 15905015 -183725135 + LTR9B LTR ERV1 5 644 0 185 325 26 34 chr5 15905023 15905140 -183725010 - L2 LINE L2 -749 2565 2450 372 208 0 0 chr5 15905161 15905233 -183724917 - MLT1D LTR MaLR -433 72 1 1241 285 148 4 chr5 15905248 15905760 -183724390 - L2 LINE L2 -881 2433 1848 1436 244 99 38 chr5 15905766 15906340 -183723810 + MLT1E2 LTR MaLR 13 621 -5 308 270 246 9 chr5 15906343 15906554 -183723596 - L2 LINE L2 -1457 1857 1597 2087 123 7 13 chr5 15906921 15907231 -183722919 - AluY SINE Alu -3 308 1 452 194 0 0 chr5 15907248 15907351 -183722799 - L1MA7 LINE L1 -2 6289 6187 315 301 30 38 chr5 15907429 15907478 -183722672 - MIR3 SINE MIR -9 199 151 3234 108 16 85 chr5 15907478 15908041 -183722109 + MER1A DNA MER1_type 4 527 0 315 301 30 38 chr5 15908041 15908124 -183722026 - MIR3 SINE MIR -57 151 68 2120 113 0 0 chr5 15911325 15911747 -183718403 + AluSq SINE Alu 1 422 0 535 196 0 10 chr5 15911903 15912005 -183718145 + MER69A DNA AcHobo 4 104 -73 412 334 88 34 chr5 15912307 15912660 -183717490 + L2 LINE L2 2475 2846 -468 577 180 16 8 chr5 15912661 15912783 -183717367 + MLT1C LTR MaLR 1 123 -344 368 80 293 13 chr5 15912782 15912857 -183717293 + MLT1C LTR MaLR 372 467 0 * 250 322 53 13 chr5 15912910 15913062 -183717088 + L2 LINE L2 2921 3078 -194 252 315 0 0 chr5 15913377 15913431 -183716719 + L2 LINE L2 3202 3255 -17 28 0 0 0 chr5 15914983 15915011 -183715139 + AT_rich Low_complexity Low_complexity 1 28 0 1951 149 0 38 chr5 15915050 15915366 -183714784 - AluSx SINE Alu -8 304 1 1355 99 25 0 chr5 15915372 15915573 -183714577 - L1PA15 LINE L1 -16 6149 5944 1992 140 16 13 chr5 15916670 15916978 -183713172 + AluSx SINE Alu 1 309 -3 180 97 0 0 chr5 15916996 15917027 -183713123 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 3075 123 25 82 chr5 15917588 15918147 -183712003 - MER1A DNA MER1_type 0 527 1 454 32 63 0 chr5 15918286 15918349 -183711801 - L1PA4 LINE L1 -2 6153 6087 21 57 0 0 chr5 15920427 15920462 -183709688 + AT_rich Low_complexity Low_complexity 1 35 0 1953 154 3 7 chr5 15920539 15920837 -183709313 - AluJb SINE Alu -15 297 1 24545 103 26 67 chr5 15921008 15921392 -183708758 + L1PA7 LINE L1 8 406 -6055 2372 89 3 0 chr5 15921392 15921695 -183708455 - AluSp SINE Alu -9 304 1 24545 103 26 67 chr5 15921695 15924433 -183705717 + L1PA7 LINE L1 406 2850 -3611 2831 0 0 0 chr5 15924433 15924736 -183705414 - AluYa5 SINE Alu -8 303 1 24545 103 26 67 chr5 15924736 15927230 -183702920 + L1PA7 LINE L1 2850 5446 -1015 4454 67 3 0 chr5 15927230 15927807 -183702343 + L1PA7 LINE L1 5887 6469 0 253 186 0 127 chr5 15929472 15929572 -183700578 + MLT1J LTR MaLR 41 126 -320 708 235 24 24 chr5 15929600 15929770 -183700380 - MER5B DNA MER1_type -7 171 2 446 303 15 20 chr5 15929827 15930022 -183700128 + MLT1J LTR MaLR 315 508 -3 398 252 41 32 chr5 15930197 15930320 -183699830 + L2 LINE L2 3186 3309 -4 2207 113 13 0 chr5 15930903 15931205 -183698945 + AluSx SINE Alu 1 306 -6 29 28 0 0 chr5 15932070 15932106 -183698044 + AT_rich Low_complexity Low_complexity 1 36 0 630 300 166 54 chr5 15932391 15933202 -183696948 + L2 LINE L2 2072 2973 -341 2186 98 49 0 chr5 15934236 15934522 -183695628 - AluSc SINE Alu -9 300 1 353 311 34 0 chr5 15936166 15936285 -183693865 + L2 LINE L2 3149 3271 -1 2121 113 26 47 chr5 15936441 15936821 -183693329 + THE1C LTR MaLR 2 373 -2 232 271 29 0 chr5 15937395 15937465 -183692685 + MIR SINE MIR 117 188 -74 345 258 108 42 chr5 15938866 15939033 -183691117 + L1ME4a LINE L1 5944 6121 0 216 0 0 0 chr5 15939035 15939059 -183691091 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 249 255 255 0 chr5 15939333 15939431 -183690719 + MIR SINE MIR 82 204 -58 536 240 134 9 chr5 15939433 15939799 -183690351 + LTR16A1 LTR ERVL 8 442 -15 367 323 55 30 chr5 15941537 15941772 -183688378 - L1M4 LINE L1 -1535 4611 4371 845 210 10 68 chr5 15942079 15942364 -183687786 + L1PB4 LINE L1 5903 6296 -2 201 208 21 0 chr5 15942559 15942607 -183687543 + (TTA)n Simple_repeat Simple_repeat 1 49 0 215 79 26 0 chr5 15942871 15942909 -183687241 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 830 174 0 0 chr5 15942909 15943030 -183687120 - FLAM_C SINE Alu -22 121 1 1792 199 3 0 chr5 15943754 15944046 -183686104 - AluSx SINE Alu -19 293 1 2301 103 10 0 chr5 15944415 15944716 -183685434 + AluSq SINE Alu 1 304 -9 1899 251 30 48 chr5 15946125 15946961 -183683189 + L1M3de LINE L1 938 1867 -5619 6275 237 13 13 chr5 15946975 15948523 -183681627 + L1M3de LINE L1 1199 2535 -4951 506 165 11 0 chr5 15948523 15948614 -183681536 - Tigger5 DNA MER2_type 0 2323 2232 271 217 0 17 chr5 15948663 15948723 -183681427 - Tigger5 DNA MER2_type 0 2323 2265 267 175 0 35 chr5 15948705 15948762 -183681388 - Tigger5 DNA MER2_type -2268 55 1 * 5490 223 52 33 chr5 15948762 15951779 -183678371 + L1M3de LINE L1 2259 5293 -2272 25 0 0 0 chr5 15953178 15953203 -183676947 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 15953558 15953582 -183676568 + AT_rich Low_complexity Low_complexity 1 24 0 414 212 53 44 chr5 15953637 15953750 -183676400 + MIR SINE MIR 90 203 -59 2044 116 7 13 chr5 15953788 15954091 -183676059 + AluSx SINE Alu 1 301 -11 25 0 0 0 chr5 15954095 15954120 -183676030 + AT_rich Low_complexity Low_complexity 1 25 0 195 129 0 0 chr5 15954140 15954171 -183675979 + (CA)n Simple_repeat Simple_repeat 1 31 0 327 104 0 0 chr5 15954499 15954547 -183675603 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 185 315 28 77 chr5 15954749 15954892 -183675258 + MIR3 SINE MIR 46 181 -27 537 259 157 5 chr5 15956017 15956202 -183673948 + MIR SINE MIR 50 262 0 419 330 146 40 chr5 15956701 15957510 -183672640 + L2 LINE L2 748 1642 -1672 441 283 101 25 chr5 15957562 15957760 -183672390 + L2 LINE L2 2916 3128 -185 560 296 45 42 chr5 15957928 15958330 -183671820 + L1ME4a LINE L1 5530 5932 -189 24 67 0 0 chr5 15958393 15958438 -183671712 + AT_rich Low_complexity Low_complexity 1 45 0 1696 200 140 18 chr5 15958659 15959160 -183670990 + MER68 LTR ERV1 1 562 0 2153 111 3 3 chr5 15959357 15959654 -183670496 + AluSx SINE Alu 1 297 -15 183 315 69 23 chr5 15960697 15960827 -183669323 + L2 LINE L2 2947 3082 -190 646 167 65 14 chr5 15961507 15961645 -183668505 + MLT1D LTR MaLR 1 145 -360 228 306 62 42 chr5 15961907 15962051 -183668099 - L3b LINE CR1 -133 1450 1304 238 229 0 0 chr5 15962719 15962780 -183667370 + L1MA7 LINE L1 6197 6257 -34 24 67 0 0 chr5 15962825 15962870 -183667280 + AT_rich Low_complexity Low_complexity 1 45 0 334 252 37 0 chr5 15963279 15963386 -183666764 - MER103 DNA DNA -45 121 11 2671 3 0 3 chr5 15964216 15964510 -183665640 + AluYa5 SINE Alu 1 293 -18 1654 265 122 53 chr5 15964873 15965920 -183664230 + L2 LINE L2 2183 3305 -8 323 145 72 123 chr5 15966236 15966374 -183663776 - MER103 DNA DNA -14 152 22 234 347 57 32 chr5 15966636 15966760 -183663390 - MIR3 SINE MIR -67 141 15 1304 301 44 9 chr5 15967016 15967475 -183662675 + MLT1H1 LTR MaLR 26 500 -55 471 303 55 55 chr5 15967739 15967977 -183662173 + MIR SINE MIR 3 240 -22 1462 293 54 71 chr5 15968019 15968153 -183661997 + L2 LINE L2 1894 2029 -1285 2320 107 7 0 chr5 15968153 15968463 -183661687 - AluSx SINE Alu 0 312 1 1462 293 54 71 chr5 15968463 15969367 -183660783 + L2 LINE L2 2029 2914 -400 27 87 0 0 chr5 15970843 15970912 -183659238 + AT_rich Low_complexity Low_complexity 1 69 0 446 326 160 39 chr5 15971428 15971815 -183658335 + L1MEd LINE L1 29 462 -5657 323 250 12 0 chr5 15971828 15971912 -183658238 - MER58 DNA MER1_type -60 281 197 357 300 80 52 chr5 15972032 15972722 -183657428 + L1MEd LINE L1 544 1252 -4867 25 51 0 0 chr5 15972785 15972824 -183657326 + AT_rich Low_complexity Low_complexity 1 39 0 463 344 41 36 chr5 15972831 15973194 -183656956 + L1MEd LINE L1 1321 1685 -4444 340 281 154 19 chr5 15973280 15973540 -183656610 + L1MEd LINE L1 1877 2171 -3958 197 199 60 0 chr5 15973554 15973720 -183656430 + (TA)n Simple_repeat Simple_repeat 1 176 0 243 266 10 80 chr5 15973803 15973861 -183656289 + L1MEd LINE L1 2196 2257 -3872 1991 167 0 0 chr5 15973861 15974172 -183655978 + AluJb SINE Alu 1 311 -1 243 266 10 80 chr5 15974172 15974312 -183655838 + L1MEd LINE L1 2257 2380 -3749 1587 198 125 3 chr5 15974425 15974778 -183655372 + MSTD LTR MaLR 1 396 0 4821 143 37 18 chr5 15974784 15975676 -183654474 + L1MC1 LINE L1 5425 6333 0 471 302 55 23 chr5 15975755 15976318 -183653832 + L1MEd LINE L1 2658 3238 -2891 2238 82 7 0 chr5 15976381 15976661 -183653489 + AluSx SINE Alu 1 282 -30 1633 136 55 16 chr5 15978387 15978695 -183651455 - MER44D DNA MER2_type 0 609 20 276 351 97 9 chr5 15979009 15979123 -183651027 + L2 LINE L2 3137 3260 -12 956 259 8 29 chr5 15979405 15979648 -183650502 + MIR SINE MIR 4 241 -21 239 270 40 10 chr5 15981638 15981738 -183648412 + (TA)n Simple_repeat Simple_repeat 1 103 0 239 257 28 37 chr5 15981800 15981909 -183648241 + (TA)n Simple_repeat Simple_repeat 1 108 0 212 250 0 0 chr5 15982100 15982144 -183648006 - L2 LINE L2 -2 3311 3268 180 200 40 20 chr5 15982624 15982674 -183647476 + L2 LINE L2 3263 3313 0 388 230 20 0 chr5 15984479 15984579 -183645571 + L1MC5 LINE L1 7797 7898 -63 37 0 0 0 chr5 15985341 15985378 -183644772 + AT_rich Low_complexity Low_complexity 1 37 0 30 0 0 0 chr5 15985828 15985858 -183644292 + AT_rich Low_complexity Low_complexity 1 30 0 237 197 33 0 chr5 15986179 15986240 -183643910 + L1MC4 LINE L1 6641 6703 -1339 233 342 13 0 chr5 15986873 15986952 -183643198 - L2 LINE L2 0 3313 3234 1536 201 102 56 chr5 15987214 15987698 -183642452 + MLT1F1 LTR MaLR 7 513 -54 2190 99 13 7 chr5 15987698 15988000 -183642150 - AluSg SINE Alu -6 304 1 1536 201 102 56 chr5 15988000 15988058 -183642092 + MLT1F1 LTR MaLR 513 567 0 1181 125 31 18 chr5 15988866 15989032 -183641118 - L1MA4A LINE L1 0 6303 6132 522 42 111 0 chr5 15989032 15989104 -183641046 - MADE1 DNA Mariner 0 80 1 1181 125 31 18 chr5 15989104 15989161 -183640989 - L1MA4A LINE L1 -171 6132 6077 572 27 0 0 chr5 15990248 15990321 -183639829 + L1PA4 LINE L1 6080 6152 -3 426 79 0 0 chr5 15990645 15990708 -183639442 + (TC)n Simple_repeat Simple_repeat 2 64 0 396 0 0 0 chr5 15990708 15990752 -183639398 + (CA)n Simple_repeat Simple_repeat 1 44 0 2294 99 0 3 chr5 15991678 15991981 -183638169 + AluSx SINE Alu 2 303 -9 2263 85 3 7 chr5 15992994 15993289 -183636861 + AluSq SINE Alu 1 294 -19 238 273 0 136 chr5 15993305 15993415 -183636735 - MIR SINE MIR -104 104 10 564 275 60 64 chr5 15993481 15993626 -183636524 + MIR SINE MIR 12 157 -105 2400 90 3 0 chr5 15993626 15993927 -183636223 + AluSp SINE Alu 1 302 -11 564 275 60 64 chr5 15993927 15994032 -183636118 + MIR SINE MIR 157 261 -1 2188 127 5 42 chr5 15994647 15995024 -183635126 - THE1B LTR MaLR -1 363 1 381 203 0 0 chr5 15995087 15995161 -183634989 + MER81 DNA DNA 10 83 -31 30 27 0 0 chr5 15996303 15996340 -183633810 + AT_rich Low_complexity Low_complexity 1 37 0 2130 90 3 72 chr5 15996445 15996777 -183633373 + AluSc SINE Alu 1 309 0 3923 135 33 19 chr5 15998041 15998743 -183631407 + L1MB2 LINE L1 5457 6168 -3 378 266 53 9 chr5 15999175 15999288 -183630862 + MIR SINE MIR 141 258 -4 578 267 9 59 chr5 15999434 15999655 -183630495 - MER63A DNA MER1_type 0 210 1 292 269 145 0 chr5 16000639 16000784 -183629366 - L1ME4a LINE L1 -1 6120 5955 262 269 76 19 chr5 16001078 16001249 -183628901 - L1ME4a LINE L1 -206 5915 5728 231 200 20 0 chr5 16001329 16001379 -183628771 - L2 LINE L2 -1 3312 3262 192 390 88 48 chr5 16001679 16001974 -183628176 - L2 LINE L2 -367 2947 2641 232 321 124 22 chr5 16002017 16002154 -183627996 - L2 LINE L2 -926 2388 2238 804 221 38 9 chr5 16002160 16002373 -183627777 - MER20 DNA MER1_type 0 219 1 277 256 64 13 chr5 16002460 16002538 -183627612 - MER91B DNA MER1_type -107 83 2 225 188 0 42 chr5 16002543 16002591 -183627559 + L2 LINE L2 3268 3313 0 2269 113 7 0 chr5 16002740 16003040 -183627110 + AluSx SINE Alu 1 302 -10 766 292 144 14 chr5 16003165 16003678 -183626472 + MLT1G1 LTR MaLR 8 587 -8 275 331 47 24 chr5 16003738 16003865 -183626285 - L2 LINE L2 -1480 1834 1705 560 298 36 6 chr5 16005347 16005515 -183624635 + MIR3 SINE MIR 18 190 -18 355 270 88 15 chr5 16006245 16006382 -183623768 - MIR SINE MIR -74 188 42 3349 167 12 78 chr5 16007176 16007920 -183622230 + MER44D DNA MER2_type 10 704 -1 258 348 25 8 chr5 16008328 16008446 -183621704 + L2 LINE L2 3188 3307 -6 22 0 0 0 chr5 16009636 16009658 -183620492 + AT_rich Low_complexity Low_complexity 1 22 0 748 191 23 23 chr5 16009729 16009902 -183620248 - MER5B DNA MER1_type -5 173 1 261 286 78 0 chr5 16010111 16010188 -183619962 + L2 LINE L2 3231 3313 0 1809 158 7 17 chr5 16010306 16010603 -183619547 + AluJo SINE Alu 6 299 -13 2849 117 33 35 chr5 16011679 16012165 -183617985 + MER31A LTR ERV1 1 485 0 233 305 84 130 chr5 16012437 16012745 -183617405 - L2 LINE L2 0 3272 2979 23 0 0 0 chr5 16013425 16013448 -183616702 + AT_rich Low_complexity Low_complexity 1 23 0 1798 160 7 10 chr5 16014831 16015131 -183615019 - AluJb SINE Alu -13 299 1 281 281 11 22 chr5 16016052 16016141 -183614009 - L2 LINE L2 -1 3312 3225 565 204 68 20 chr5 16016164 16016311 -183613839 - MER104 DNA Tc2 -26 154 1 212 313 45 15 chr5 16016560 16016627 -183613523 + MIR SINE MIR 5 73 -189 959 291 10 14 chr5 16017165 16017454 -183612696 + HsTC2b DNA Tc2 64 351 -564 630 243 200 4 chr5 16017450 16017685 -183612465 + HsTC2b DNA Tc2 640 920 0 * 2202 88 32 3 chr5 16019517 16019802 -183610348 - AluSp SINE Alu -20 293 1 2058 148 0 10 chr5 16020435 16020746 -183609404 - AluJo SINE Alu -4 308 1 938 114 0 23 chr5 16022018 16022149 -183608001 - FRAM SINE Alu -24 152 25 21 0 0 0 chr5 16022276 16022297 -183607853 + AT_rich Low_complexity Low_complexity 1 21 0 2281 115 0 6 chr5 16022920 16023234 -183606916 - AluSx SINE Alu 0 312 1 2442 131 91 10 chr5 16024240 16024636 -183605514 + MSTA LTR MaLR 1 428 0 306 218 0 0 chr5 16025531 16025586 -183604564 + L2 LINE L2 3211 3265 -7 36 0 0 0 chr5 16026786 16026822 -183603328 + AT_rich Low_complexity Low_complexity 1 36 0 28 48 0 0 chr5 16027035 16027077 -183603073 + AT_rich Low_complexity Low_complexity 1 42 0 524 292 54 8 chr5 16027195 16027435 -183602715 - L1ME4a LINE L1 -213 5908 5658 274 231 38 127 chr5 16027517 16027729 -183602421 - L1ME4a LINE L1 -2337 5471 5279 1915 120 45 0 chr5 16028183 16028471 -183601679 - AluSx SINE Alu 0 302 3 2286 89 3 3 chr5 16028913 16029205 -183600945 + AluSq SINE Alu 1 292 -21 1015 239 42 5 chr5 16029640 16029853 -183600297 + MER58A DNA MER1_type 4 224 0 27 49 0 0 chr5 16030400 16030441 -183599709 + AT_rich Low_complexity Low_complexity 1 41 0 272 185 0 0 chr5 16030446 16030500 -183599650 - MIR SINE MIR -108 154 101 234 217 0 0 chr5 16030541 16030587 -183599563 - MIR SINE MIR -114 148 103 2344 112 0 0 chr5 16030589 16030901 -183599249 + AluSx SINE Alu 1 312 0 22 35 0 0 chr5 16031128 16031157 -183598993 + AT_rich Low_complexity Low_complexity 1 29 0 1081 129 12 6 chr5 16031235 16031405 -183598745 - L1MA10 LINE L1 -8 6326 6156 21 0 0 0 chr5 16031494 16031515 -183598635 + AT_rich Low_complexity Low_complexity 1 21 0 830 183 102 42 chr5 16031715 16032084 -183598066 - MER31B LTR ERV1 0 466 1 1667 146 25 14 chr5 16032336 16032523 -183597627 + LTR64 LTR ERVK 1 194 -364 2240 85 3 3 chr5 16032523 16032832 -183597318 + AluSx SINE Alu 1 309 0 1667 146 25 14 chr5 16032832 16032924 -183597226 + LTR64 LTR ERVK 194 284 -274 596 121 224 9 chr5 16033025 16033141 -183597009 - AluJo SINE Alu -161 151 11 869 211 211 0 chr5 16033155 16033382 -183596768 + LTR64 LTR ERVK 284 558 0 262 56 0 0 chr5 16034994 16035030 -183595120 - L1PB1 LINE L1 -1 6150 6115 18060 140 62 26 chr5 16035092 16035387 -183594763 - L1PB1 LINE L1 -39 6831 6548 210 71 0 0 chr5 16035387 16035415 -183594735 + (TG)n Simple_repeat Simple_repeat 2 29 0 18060 140 62 26 chr5 16035415 16035982 -183594168 - L1PB1 LINE L1 -322 6548 6003 2080 134 6 13 chr5 16035982 16036296 -183593854 - AluSx SINE Alu 0 312 1 18060 140 62 26 chr5 16036296 16036756 -183593394 - L1PB1 LINE L1 -867 6003 5561 210 37 0 0 chr5 16036756 16036783 -183593367 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 18060 140 62 26 chr5 16036783 16042002 -183588148 - L1PB1 LINE L1 -1309 5561 4 283 95 0 0 chr5 16042051 16042093 -183588057 + FLAM_A SINE Alu 88 129 -4 1884 225 83 7 chr5 16042101 16042545 -183587605 + MLT1D LTR MaLR 28 505 0 291 118 168 27 chr5 16042616 16042712 -183587438 + MIR SINE MIR 40 149 -59 2238 159 21 45 chr5 16042819 16043241 -183586909 + MER65A LTR ERV1 1 412 -33 1831 148 40 3 chr5 16043263 16043560 -183586590 - AluJb SINE Alu -3 309 2 259 204 0 0 chr5 16043560 16043609 -183586541 + MER65A LTR ERV1 397 445 0 1935 145 75 23 chr5 16044207 16044552 -183585598 - THE1B LTR MaLR 0 364 2 242 264 27 109 chr5 16044907 16045017 -183585133 + LTR67 LTR ERVL 100 200 -357 790 231 48 0 chr5 16045026 16045173 -183584977 + FRAM SINE Alu 1 154 -22 2292 197 67 45 chr5 16045368 16045826 -183584324 + MER44D DNA MER2_type 1 447 -2040 198 0 0 0 chr5 16045826 16045848 -183584302 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 294 29 0 0 chr5 16045847 16045882 -183584268 + (CA)n Simple_repeat Simple_repeat 2 36 0 2292 197 67 45 chr5 16045848 16045961 -183584189 + MER44D DNA MER2_type 447 605 0 21 36 0 0 chr5 16046094 16046122 -183584028 + AT_rich Low_complexity Low_complexity 1 28 0 595 185 35 17 chr5 16046513 16046649 -183583501 - MLT1A1 LTR MaLR -2 570 260 1677 190 78 13 chr5 16047343 16047657 -183582493 + MLT2D LTR ERVL 6 351 -63 2123 159 45 0 chr5 16047657 16047990 -183582160 + MER7A DNA MER2_type 1 346 0 1677 190 78 13 chr5 16047990 16048059 -183582091 + MLT2D LTR ERVL 351 414 0 705 307 49 40 chr5 16048103 16048657 -183581493 + L2 LINE L2 2725 3312 -1 * 1346 252 165 57 chr5 16048646 16048969 -183581181 + L2 LINE L2 1700 1987 -1326 2174 108 3 16 chr5 16048969 16049274 -183580876 - AluSc SINE Alu -8 301 1 1346 252 165 57 chr5 16049274 16050383 -183579767 + L2 LINE L2 1987 3308 -5 288 260 78 0 chr5 16050438 16050515 -183579635 + L2 LINE L2 3149 3231 -41 2388 141 16 33 chr5 16050942 16051369 -183578781 + MER95 LTR ERV 7 426 -5 202 401 0 0 chr5 16051608 16051785 -183578365 + (TGAA)n Simple_repeat Simple_repeat 1 177 0 302 360 27 0 chr5 16052125 16052275 -183577875 + MER5B DNA MER1_type 1 154 -24 782 184 7 0 chr5 16052480 16052621 -183577529 - Charlie1 DNA MER1_type 0 2761 2620 427 223 291 0 chr5 16052615 16052790 -183577360 - Charlie1 DNA MER1_type -2534 227 2 * 756 211 94 55 chr5 16053045 16053353 -183576797 + MLT1D LTR MaLR 9 328 -177 5066 41 0 2 chr5 16053353 16053963 -183576187 - L1P LINE L1 -1679 4467 3859 5566 36 0 0 chr5 16053963 16054569 -183575581 + L1PA5 LINE L1 5528 6143 -11 333 0 0 0 chr5 16054570 16054607 -183575543 + (TA)n Simple_repeat Simple_repeat 2 38 0 754 164 26 77 chr5 16054607 16054802 -183575348 + MLT1D LTR MaLR 320 504 -1 357 255 50 56 chr5 16056257 16056418 -183573732 + LTR16C LTR ERVL 332 491 0 2104 92 50 3 chr5 16056711 16056993 -183573157 + AluSx SINE Alu 2 296 -16 2243 108 0 16 chr5 16057556 16057862 -183572288 - AluSx SINE Alu -11 301 1 2216 97 0 23 chr5 16057868 16058167 -183571983 - AluSg SINE Alu -18 292 1 348 219 91 91 chr5 16058436 16058623 -183571527 + L1ME4a LINE L1 5787 5976 -145 2538 63 0 0 chr5 16058623 16058923 -183571227 - AluY SINE Alu -11 300 1 348 219 91 91 chr5 16058923 16059022 -183571128 + L1ME4a LINE L1 5975 6073 -48 1156 211 9 5 chr5 16059033 16059251 -183570899 - MIR SINE MIR -26 236 18 195 139 0 0 chr5 16059293 16059329 -183570821 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 2368 87 0 3 chr5 16059411 16059722 -183570428 + AluY SINE Alu 1 310 -1 2202 122 3 0 chr5 16059726 16060030 -183570120 + AluSq SINE Alu 1 305 -8 738 119 22 0 chr5 16060626 16060760 -183569390 + GA-rich Low_complexity Low_complexity 3 139 0 1887 223 57 94 chr5 16064641 16065382 -183564768 - MER69B DNA AcHobo -9 1217 505 392 145 36 36 chr5 16065401 16065484 -183564666 - MLT1A1 LTR MaLR -282 83 1 4045 196 63 20 chr5 16065492 16066304 -183563846 - MLT1A1-int LTR MaLR -2 1733 887 3382 118 58 74 chr5 16066308 16066670 -183563480 - MLT1A1-int LTR MaLR -1107 628 243 280 0 28 0 chr5 16066670 16066706 -183563444 - tRNA-Cys-TGC tRNA tRNA -38 37 1 3382 118 58 74 chr5 16066706 16066946 -183563204 - MLT1A1-int LTR MaLR -1492 243 1 1635 206 13 68 chr5 16066946 16067031 -183563119 - MLT1A1 LTR MaLR 0 365 277 2380 101 0 0 chr5 16067031 16067327 -183562823 - AluSx SINE Alu -16 296 1 1635 206 13 68 chr5 16067327 16067625 -183562525 - MLT1A1 LTR MaLR -88 277 3 518 162 179 0 chr5 16067629 16067746 -183562404 - MER69B DNA AcHobo -1087 139 2 2209 119 0 0 chr5 16068061 16068355 -183561795 - AluSx SINE Alu -18 294 1 3841 169 34 18 chr5 16068382 16069120 -183561030 - L1MB1 LINE L1 -1 6167 5418 1513 201 87 47 chr5 16069207 16069654 -183560496 + MLT1C LTR MaLR 1 465 -2 703 102 17 17 chr5 16069656 16069774 -183560376 - L1P LINE L1 -747 5419 5302 4585 129 17 8 chr5 16069774 16070496 -183559654 + L1PA16 LINE L1 5438 6166 0 2339 96 3 19 chr5 16070532 16070845 -183559305 - AluY SINE Alu -3 308 1 192 77 0 0 chr5 16070848 16070874 -183559276 + (T)n Simple_repeat Simple_repeat 1 26 0 2209 116 0 0 chr5 16071087 16071379 -183558771 - AluSc SINE Alu -17 292 1 27 0 0 0 chr5 16072006 16072033 -183558117 + AT_rich Low_complexity Low_complexity 1 27 0 883 211 161 70 chr5 16072724 16073269 -183556881 + MLT1G1 LTR MaLR 1 595 0 328 254 91 0 chr5 16073721 16073831 -183556319 + MIR SINE MIR 25 144 -64 374 300 33 0 chr5 16073936 16074056 -183556094 + MIR3 SINE MIR 54 177 -31 323 308 8 38 chr5 16075308 16075441 -183554709 + MIR SINE MIR 13 141 -121 1882 179 54 14 chr5 16075518 16075887 -183554263 - MLT1B LTR MaLR -6 384 1 271 244 24 12 chr5 16076245 16076327 -183553823 + L2 LINE L2 3197 3279 -34 2282 119 3 0 chr5 16077073 16077384 -183552766 + AluSx SINE Alu 1 312 0 225 239 25 25 chr5 16077421 16077522 -183552628 + GA-rich Low_complexity Low_complexity 2 105 -55 1874 115 28 65 chr5 16077522 16077843 -183552307 + AluSx SINE Alu 1 309 -3 225 239 25 25 chr5 16077843 16077900 -183552250 + GA-rich Low_complexity Low_complexity 104 160 0 229 229 0 43 chr5 16077909 16077979 -183552171 + L2 LINE L2 3246 3312 -1 524 245 123 19 chr5 16079095 16079356 -183550794 - L1ME4a LINE L1 -2 6119 5832 195 69 0 0 chr5 16081036 16081065 -183549085 + (CGCGG)n Simple_repeat Simple_repeat 3 31 0 1593 115 24 77 chr5 16081588 16081926 -183548224 - MER33 DNA MER1_type 0 324 5 3342 131 10 4 chr5 16081939 16082429 -183547721 - MER1A DNA MER1_type 0 529 37 2245 94 3 7 chr5 16082540 16082837 -183547313 - AluSq SINE Alu -17 296 1 2045 118 20 10 chr5 16082837 16083134 -183547016 - AluSx SINE Alu -12 300 1 302 264 65 52 chr5 16083593 16083748 -183546402 - MIR SINE MIR -47 215 59 2204 125 0 0 chr5 16084491 16084780 -183545370 - AluSx SINE Alu -23 289 1 209 241 69 0 chr5 16084848 16084906 -183545244 + L2 LINE L2 3244 3305 -8 2368 108 10 0 chr5 16085059 16085366 -183544784 + AluSg SINE Alu 1 310 0 244 306 0 0 chr5 16085407 16085469 -183544681 - MIR SINE MIR -105 103 42 826 292 58 65 chr5 16087022 16087574 -183542576 + LTR67 LTR ERVL 2 549 -8 5603 125 2 6 chr5 16087579 16088443 -183541707 - L1P LINE L1 -1033 5113 4253 2195 108 35 20 chr5 16088443 16088772 -183541378 + L1PA10 LINE L1 5817 6164 -4 237 214 0 18 chr5 16089062 16089118 -183541032 - MLT2C1 LTR ERVL -2 518 464 420 20 0 0 chr5 16089134 16089183 -183540967 + (CA)n Simple_repeat Simple_repeat 1 49 0 739 229 78 0 chr5 16089209 16089375 -183540775 - MLT2C1 LTR ERVL -40 357 179 778 163 23 8 chr5 16089863 16089992 -183540158 + AluJ SINE Alu 5 135 -177 7143 23 0 1 chr5 16089992 16090807 -183539343 - L1PA4 LINE L1 -4 6151 5338 914 216 0 0 chr5 16090808 16090975 -183539175 + AluJ SINE Alu 134 300 -12 693 248 40 0 chr5 16091308 16091510 -183538640 + LTR37B LTR ERV1 4 213 -255 438 204 0 45 chr5 16091574 16091662 -183538488 + FLAM_A SINE Alu 36 119 -23 186 133 0 0 chr5 16091675 16091705 -183538445 + (TA)n Simple_repeat Simple_repeat 1 30 0 237 239 22 43 chr5 16091706 16091798 -183538352 + L1MC4 LINE L1 6614 6703 -1339 253 278 0 0 chr5 16091798 16091870 -183538280 + LTR37B LTR ERV1 217 288 -180 329 204 54 0 chr5 16091916 16092009 -183538141 + LTR37B LTR ERV1 368 465 -3 1319 218 35 58 chr5 16092963 16093362 -183536788 - MLT1B LTR MaLR 0 390 1 198 316 231 0 chr5 16093464 16093581 -183536569 - L2 LINE L2 0 3272 3129 2153 122 3 7 chr5 16094101 16094396 -183535754 - AluSx SINE Alu -18 294 1 32 43 0 0 chr5 16094457 16094503 -183535647 + AT_rich Low_complexity Low_complexity 1 46 0 208 158 0 26 chr5 16095104 16095142 -183535008 + (TG)n Simple_repeat Simple_repeat 2 38 0 2307 116 0 0 chr5 16095891 16096192 -183533958 - AluSx SINE Alu -11 301 1 3759 164 13 80 chr5 16097083 16097801 -183532349 + L1MB8 LINE L1 5382 6036 -142 1874 148 32 3 chr5 16097801 16098085 -183532065 + AluJb SINE Alu 1 292 -20 3759 164 13 80 chr5 16098085 16098219 -183531931 + L1MB8 LINE L1 6036 6177 -1 208 327 69 40 chr5 16099498 16099700 -183530450 + L2 LINE L2 1168 1375 -1939 598 256 63 5 chr5 16099906 16100097 -183530053 + MIR SINE MIR 51 252 -10 200 203 62 16 chr5 16100114 16100178 -183529972 + (TATATG)n Simple_repeat Simple_repeat 4 70 0 1420 120 0 0 chr5 16100212 16100396 -183529754 - AluSg SINE Alu -126 184 1 269 290 206 0 chr5 16100984 16101091 -183529059 - MER94 DNA DNA -4 130 2 243 319 33 44 chr5 16101326 16101508 -183528642 + L2 LINE L2 2221 2400 -914 228 320 70 33 chr5 16101756 16102000 -183528150 + L2 LINE L2 1789 2041 -1273 218 277 89 0 chr5 16102000 16102112 -183528038 - L2 LINE L2 -917 2397 2276 528 156 11 0 chr5 16102117 16102207 -183527943 - MER3 DNA MER1_type 0 209 119 387 206 0 0 chr5 16102650 16102723 -183527427 + L2 LINE L2 3240 3312 -1 257 109 22 0 chr5 16102724 16102770 -183527380 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 291 280 127 38 chr5 16103505 16103564 -183526586 - MIR SINE MIR -67 195 143 2247 108 76 15 chr5 16103564 16103907 -183526243 - THE1B LTR MaLR 0 364 1 291 280 127 38 chr5 16103907 16104004 -183526146 - MIR SINE MIR -119 143 25 1399 228 13 0 chr5 16104270 16104568 -183525582 + MLT1H1 LTR MaLR 254 555 0 249 338 45 15 chr5 16105513 16105646 -183524504 - L3b LINE CR1 -8 1575 1439 227 167 48 0 chr5 16105770 16105812 -183524338 - MER91 DNA MER1_type -11 185 142 1183 183 19 60 chr5 16106870 16107098 -183523052 + L1MB5 LINE L1 5912 6129 -45 2281 99 3 0 chr5 16107098 16107392 -183522758 + AluSx SINE Alu 1 295 -17 1183 183 19 60 chr5 16107392 16107431 -183522719 + L1MB5 LINE L1 6129 6168 -6 293 103 0 0 chr5 16107480 16107519 -183522631 + Charlie8 DNA MER1_type 123 161 -2256 1405 205 88 57 chr5 16107907 16108360 -183521790 - MLT1C LTR MaLR 0 467 1 354 233 35 0 chr5 16108401 16108487 -183521663 + L2 LINE L2 3206 3294 -19 325 274 26 26 chr5 16108895 16109008 -183521142 + MER5A DNA MER1_type 2 114 -75 749 297 40 11 chr5 16109257 16109533 -183520617 + MLT1L LTR MaLR 7 290 -325 2277 170 60 44 chr5 16109660 16110159 -183519991 - LTR53 LTR ERVL -2 517 11 262 111 0 0 chr5 16110514 16110550 -183519600 + LTR16C LTR ERVL 456 491 0 2121 121 46 35 chr5 16111478 16111849 -183518301 + THE1C LTR MaLR 1 375 0 264 206 44 15 chr5 16112131 16112199 -183517951 + MIR SINE MIR 79 148 -114 735 199 18 47 chr5 16112205 16112376 -183517774 + MER45A DNA AcHobo 6 171 -7 2104 139 0 0 chr5 16112473 16112761 -183517389 + AluJb SINE Alu 1 317 0 189 35 35 0 chr5 16112761 16112790 -183517360 + (TAAA)n Simple_repeat Simple_repeat 1 180 0 414 256 62 23 chr5 16113259 16113388 -183516762 + MER46C DNA MER2_type 4 137 -201 1701 186 0 4 chr5 16113461 16113741 -183516409 + AluJb SINE Alu 1 279 -33 1058 99 0 8 chr5 16113742 16114009 -183516141 + (GAAA)n Simple_repeat Simple_repeat 1 264 0 292 213 33 0 chr5 16114009 16114070 -183516080 + MER46C DNA MER2_type 275 337 -1 2105 122 3 16 chr5 16114143 16114455 -183515695 + AluSq SINE Alu 1 308 -5 2673 144 32 18 chr5 16114461 16114960 -183515190 + L1MB3 LINE L1 5668 6173 -10 2175 114 0 10 chr5 16114960 16115266 -183514884 - AluSc SINE Alu -6 303 1 2011 195 54 40 chr5 16115685 16116183 -183513967 - MLT1D LTR MaLR 0 505 1 2358 81 14 0 chr5 16116223 16116392 -183513758 - AluY SINE Alu -11 300 124 252 0 0 0 chr5 16116392 16116420 -183513730 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2358 81 14 0 chr5 16116420 16116546 -183513604 - AluY SINE Alu -187 124 1 1257 285 101 41 chr5 16116713 16117250 -183512900 + L1ME2 LINE L1 1 569 -5550 917 216 33 29 chr5 16118020 16118293 -183511857 + L1ME2 LINE L1 4388 4661 -1468 602 174 36 151 chr5 16118302 16118392 -183511758 - LTR16B LTR ERVL 0 464 412 2266 115 0 0 chr5 16118392 16118687 -183511463 + AluSq SINE Alu 1 295 -18 602 174 36 151 chr5 16118687 16118815 -183511335 - LTR16B LTR ERVL -52 412 271 387 228 48 120 chr5 16118861 16119028 -183511122 - LTR16B LTR ERVL -307 157 3 3144 225 77 28 chr5 16119028 16119454 -183510696 + L1ME2 LINE L1 4665 5069 -1078 1690 66 5 5 chr5 16119454 16119665 -183510485 + AluY SINE Alu 92 302 -9 3144 225 77 28 chr5 16119665 16120636 -183509514 + L1ME2 LINE L1 5069 6138 -9 987 164 7 0 chr5 16120675 16120827 -183509323 + AluJb SINE Alu 137 289 -23 2310 92 16 7 chr5 16121028 16121333 -183508817 - AluSq SINE Alu -5 308 1 1984 255 73 43 chr5 16121446 16122229 -183507921 - L2 LINE L2 -3 3310 2473 2198 117 3 32 chr5 16122229 16122545 -183507605 + AluSx SINE Alu 6 312 0 1984 255 73 43 chr5 16122545 16122735 -183507415 - L2 LINE L2 -840 2473 2290 5001 113 54 22 chr5 16122735 16122912 -183507238 + Tigger3(Golem) DNA MER2_type 2188 2358 -670 2376 78 3 3 chr5 16122912 16123207 -183506943 + AluSq SINE Alu 1 295 -18 5001 113 54 22 chr5 16123207 16123844 -183506306 + Tigger3(Golem) DNA MER2_type 2358 3028 0 285 61 61 61 chr5 16123844 16123893 -183506257 + MLT2B1 LTR ERVL 472 520 0 300 242 161 32 chr5 16123894 16124080 -183506070 - L2 LINE L2 -2208 1106 897 1160 194 24 0 chr5 16125095 16125306 -183504844 + MER20 DNA MER1_type 2 217 -2 2081 149 28 3 chr5 16125398 16125761 -183504389 + L1PA16 LINE L1 5794 6165 -1 184 255 117 43 chr5 16125770 16125864 -183504286 - MIR SINE MIR -157 105 5 2526 49 0 0 chr5 16125891 16126179 -183503971 + AluY SINE Alu 19 306 -5 736 211 31 6 chr5 16126416 16126577 -183503573 + MIR SINE MIR 76 240 -22 2900 173 59 2 chr5 16127299 16127876 -183502274 - L1MB5 LINE L1 -13 6161 5552 376 316 153 4 chr5 16127985 16128213 -183501937 + MIR SINE MIR 1 262 0 347 253 0 0 chr5 16128463 16128558 -183501592 - L2 LINE L2 0 3313 3219 542 182 0 10 chr5 16128558 16128657 -183501493 + MER4A LTR ERV1 1 98 -566 1551 145 155 97 chr5 16128657 16129037 -183501113 + MER4A LTR ERV1 263 664 0 224 224 69 0 chr5 16129038 16129096 -183501054 - L2 LINE L2 -92 3221 3160 452 297 109 17 chr5 16129097 16129150 -183501000 - MIR SINE MIR 0 262 215 1107 237 0 18 chr5 16129150 16129378 -183500772 + MER58A DNA MER1_type 1 224 0 452 297 109 17 chr5 16129378 16129563 -183500587 - MIR SINE MIR -47 215 2 457 317 145 25 chr5 16129710 16130186 -183499964 - L2 LINE L2 -347 2967 2435 334 158 0 18 chr5 16130480 16130537 -183499613 - LTR67 LTR ERVL -388 169 114 284 125 0 94 chr5 16130496 16130560 -183499590 - MLT1J LTR MaLR -363 148 91 * 2224 92 0 10 chr5 16130627 16130921 -183499229 + AluSx SINE Alu 1 291 -21 245 327 36 0 chr5 16131012 16131122 -183499028 - L2 LINE L2 -893 2421 2308 26 64 0 0 chr5 16131328 16131375 -183498775 + AT_rich Low_complexity Low_complexity 1 47 0 2552 205 58 45 chr5 16131672 16132879 -183497271 + L1ME1 LINE L1 4603 5869 -309 413 218 0 0 chr5 16132883 16132970 -183497180 - MER119 DNA MER1_type -36 547 461 * 454 296 114 0 chr5 16132964 16133096 -183497054 - MER119 DNA MER1_type -436 147 1 641 196 120 48 chr5 16133096 16133305 -183496845 + L1ME1 LINE L1 5938 6161 -5 1510 139 4 24 chr5 16133318 16133569 -183496581 + AluJo SINE Alu 31 276 -36 2191 121 3 3 chr5 16133570 16133875 -183496275 + AluSp SINE Alu 1 305 -8 206 108 54 0 chr5 16133890 16133927 -183496223 + A-rich Low_complexity Low_complexity 2 40 0 466 272 58 5 chr5 16134439 16134630 -183495520 - MIR SINE MIR -5 257 57 463 216 32 32 chr5 16135488 16135613 -183494537 - MER94 DNA DNA -9 125 1 764 228 19 0 chr5 16135723 16135885 -183494265 + MER33 DNA MER1_type 1 165 -159 1116 136 0 0 chr5 16135885 16136039 -183494111 + AluJb SINE Alu 133 286 -26 2021 127 3 10 chr5 16136108 16136399 -183493751 - AluSx SINE Alu -19 293 5 1722 159 3 28 chr5 16136405 16136688 -183493462 - AluJo SINE Alu -21 291 16 467 180 150 0 chr5 16136757 16136857 -183493293 + MER33 DNA MER1_type 210 324 0 2311 109 0 0 chr5 16136978 16137281 -183492869 + AluSg SINE Alu 1 303 -7 301 250 25 0 chr5 16137292 16137372 -183492778 + GA-rich Low_complexity Low_complexity 2 83 0 458 232 10 10 chr5 16138537 16138636 -183491514 + MER99 DNA DNA 3 101 -727 988 195 0 0 chr5 16138643 16138807 -183491343 - AluJb SINE Alu -11 301 138 2226 114 3 0 chr5 16138891 16139188 -183490962 - AluSx SINE Alu -14 298 1 2766 199 41 30 chr5 16139193 16139609 -183490541 + MER99 DNA DNA 158 585 -243 1946 200 15 10 chr5 16139609 16139999 -183490151 - MSTD LTR MaLR -2 394 3 2766 199 41 30 chr5 16139999 16140241 -183489909 + MER99 DNA DNA 585 823 -5 192 317 99 76 chr5 16140404 16140666 -183489484 - L2 LINE L2 0 3272 3005 244 68 23 23 chr5 16141310 16141354 -183488796 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 379 264 60 36 chr5 16141738 16141905 -183488245 + L1ME2 LINE L1 5404 5574 -592 747 294 54 59 chr5 16141922 16141980 -183488170 - LTR16A LTR ERVL -10 440 383 2309 111 0 0 chr5 16141980 16142278 -183487872 + AluSx SINE Alu 1 298 -14 747 294 54 59 chr5 16142278 16142573 -183487577 - LTR16A LTR ERVL -67 383 89 334 314 64 50 chr5 16142577 16142860 -183487290 + L1ME2 LINE L1 5591 5877 -287 207 100 0 0 chr5 16143306 16143336 -183486814 + (CA)n Simple_repeat Simple_repeat 1 30 0 1521 208 0 40 chr5 16143919 16144222 -183485928 + AluJo SINE Alu 1 291 -21 325 301 0 11 chr5 16144363 16144456 -183485694 - MLT1I LTR MaLR 0 409 318 1025 231 98 11 chr5 16144501 16144787 -183485363 - MLT1C LTR MaLR -141 326 16 382 274 52 7 chr5 16144814 16144949 -183485201 - MLT1J2 LTR MaLR -236 214 74 619 42 0 0 chr5 16146109 16146180 -183483970 + MER30 DNA MER1_type 12 82 -148 1859 136 7 23 chr5 16146183 16146485 -183483665 + AluSx SINE Alu 1 297 -15 968 155 19 0 chr5 16146510 16146671 -183483479 + MER30 DNA MER1_type 66 229 -1 1727 136 48 22 chr5 16147228 16147501 -183482649 + AluJo SINE Alu 11 290 -22 2237 105 3 0 chr5 16147661 16147955 -183482195 + AluSx SINE Alu 5 299 -13 249 146 0 42 chr5 16148007 16148055 -183482095 + Alu SINE Alu 234 274 -29 250 192 24 40 chr5 16148078 16148203 -183481947 + (TAAA)n Simple_repeat Simple_repeat 1 123 0 1131 167 51 0 chr5 16148203 16148418 -183481732 + L1PB4 LINE L1 5922 6147 -9 2248 91 3 3 chr5 16148418 16148703 -183481447 - AluY SINE Alu -21 290 6 740 215 0 6 chr5 16149275 16149447 -183480703 - Charlie1 DNA MER1_type 0 2761 2591 848 141 78 0 chr5 16149455 16149597 -183480553 - AluJb SINE Alu -22 290 138 1805 141 0 59 chr5 16149619 16149925 -183480225 - AluJb SINE Alu -24 288 1 189 86 99 12 chr5 16149984 16150065 -183480085 + (TATAA)n Simple_repeat Simple_repeat 3 90 0 1054 239 62 7 chr5 16150084 16150393 -183479757 - Charlie1 DNA MER1_type -147 2614 2289 1219 107 6 0 chr5 16150493 16150652 -183479498 - AluSx SINE Alu -148 164 5 1678 161 7 28 chr5 16150658 16150943 -183479207 - AluJo SINE Alu -21 291 13 467 180 150 0 chr5 16150991 16151091 -183479059 + Charlie5 DNA MER1_type 2510 2624 0 2327 108 0 0 chr5 16151212 16151517 -183478633 + AluSg SINE Alu 1 305 -5 301 250 25 0 chr5 16151529 16151609 -183478541 + GA-rich Low_complexity Low_complexity 2 83 0 470 222 10 10 chr5 16152774 16152873 -183477277 + MER99 DNA DNA 3 101 -727 952 200 0 0 chr5 16152880 16153040 -183477110 - AluJb SINE Alu -15 297 138 2226 114 3 0 chr5 16153124 16153421 -183476729 - AluSx SINE Alu -14 298 1 2766 199 41 30 chr5 16153426 16153842 -183476308 + MER99 DNA DNA 158 585 -243 1946 200 15 10 chr5 16153842 16154232 -183475918 - MSTD LTR MaLR -2 394 3 2766 199 41 30 chr5 16154232 16154474 -183475676 + MER99 DNA DNA 585 823 -5 192 317 99 76 chr5 16154637 16154899 -183475251 - L2 LINE L2 0 3272 3005 244 68 23 23 chr5 16155543 16155587 -183474563 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 379 264 60 36 chr5 16155971 16156138 -183474012 + L1ME2 LINE L1 5404 5574 -592 747 294 54 59 chr5 16156155 16156213 -183473937 - LTR16A LTR ERVL -10 440 383 2309 111 0 0 chr5 16156213 16156511 -183473639 + AluSx SINE Alu 1 298 -14 747 294 54 59 chr5 16156511 16156806 -183473344 - LTR16A LTR ERVL -67 383 89 334 314 64 50 chr5 16156810 16157093 -183473057 + L1ME2 LINE L1 5591 5877 -287 207 100 0 0 chr5 16157540 16157570 -183472580 + (CA)n Simple_repeat Simple_repeat 1 30 0 1527 209 0 36 chr5 16158150 16158452 -183471698 + AluJo SINE Alu 1 291 -21 325 301 0 11 chr5 16158592 16158685 -183471465 - MLT1I LTR MaLR 0 409 318 1007 234 98 11 chr5 16158730 16159016 -183471134 - MLT1C LTR MaLR -141 326 16 379 263 45 8 chr5 16159045 16159178 -183470972 - MLT1J2 LTR MaLR -239 211 74 1362 99 12 115 chr5 16160338 16160411 -183469739 + MER30 DNA MER1_type 12 91 -139 2062 146 3 0 chr5 16160411 16160720 -183469430 + AluSx SINE Alu 1 310 -2 1362 99 12 115 chr5 16160720 16160889 -183469261 + MER30 DNA MER1_type 91 229 -1 1696 139 48 22 chr5 16161446 16161719 -183468431 + AluJo SINE Alu 11 290 -22 2237 105 3 0 chr5 16161879 16162173 -183467977 + AluSx SINE Alu 5 299 -13 234 171 0 0 chr5 16162232 16162273 -183467877 + Alu SINE Alu 234 274 -29 250 192 24 40 chr5 16162296 16162421 -183467729 + (TAAA)n Simple_repeat Simple_repeat 1 123 0 1207 166 42 0 chr5 16162421 16162638 -183467512 + L1PB4 LINE L1 5922 6147 -9 2248 91 3 3 chr5 16162638 16162923 -183467227 - AluY SINE Alu -21 290 6 750 209 0 6 chr5 16163495 16163667 -183466483 - Charlie1a DNA MER1_type 0 1455 1285 848 141 78 0 chr5 16163675 16163817 -183466333 - AluJb SINE Alu -22 290 138 1762 141 3 59 chr5 16163839 16164144 -183466006 - AluJb SINE Alu -24 288 1 189 86 99 12 chr5 16164203 16164284 -183465866 + (TATAA)n Simple_repeat Simple_repeat 3 90 0 4897 206 64 25 chr5 16164303 16164836 -183465314 - Charlie1a DNA MER1_type -1453 1308 797 2414 66 7 3 chr5 16164836 16165137 -183465013 - AluSp SINE Alu -11 302 1 4897 206 64 25 chr5 16165137 16165860 -183464290 - Charlie1a DNA MER1_type -1964 797 3 1081 252 52 14 chr5 16165915 16166205 -183463945 - LTR16C LTR ERVL -4 487 187 429 316 47 57 chr5 16166242 16166625 -183463525 + L2 LINE L2 2935 3313 0 207 0 0 0 chr5 16167179 16167202 -183462948 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 566 284 14 32 chr5 16168937 16169155 -183460995 - MIR SINE MIR -22 240 27 2464 42 0 11 chr5 16169373 16169696 -183460454 + AluY SINE Alu 1 320 0 1777 158 9 29 chr5 16170041 16170357 -183459793 + AluJo SINE Alu 1 310 -2 2346 89 7 0 chr5 16171075 16171366 -183458784 + AluSq SINE Alu 1 293 -20 2593 208 66 36 chr5 16172009 16172210 -183457940 + L1MC4 LINE L1 6812 7005 -1037 2276 98 7 0 chr5 16172210 16172506 -183457644 + AluSx SINE Alu 1 298 -14 2593 208 66 36 chr5 16172506 16172998 -183457152 + L1MC4 LINE L1 7005 7526 -516 2340 82 0 14 chr5 16173098 16173392 -183456758 + AluSx SINE Alu 23 312 0 1168 224 98 90 chr5 16173392 16173901 -183456249 + L1MC4 LINE L1 7518 8030 -12 241 277 96 21 chr5 16174390 16174484 -183455666 + MLT1H LTR MaLR 432 532 -17 2211 95 0 7 chr5 16174496 16174812 -183455338 + AluSq SINE Alu 1 314 0 1992 130 3 14 chr5 16174892 16175184 -183454966 + AluJo SINE Alu 9 297 -15 2524 73 0 3 chr5 16175911 16176214 -183453936 + AluSq SINE Alu 1 302 -11 229 291 23 35 chr5 16177935 16178021 -183452129 - MIR SINE MIR -163 99 15 2265 110 10 3 chr5 16179128 16179438 -183450712 - AluSx SINE Alu 0 312 1 6200 192 49 20 chr5 16179592 16181057 -183449093 + L1MB7 LINE L1 3960 5516 -668 2360 115 0 0 chr5 16181057 16181369 -183448781 + AluSx SINE Alu 1 312 0 6200 192 49 20 chr5 16181369 16182059 -183448091 + L1MB7 LINE L1 5516 6184 0 1965 161 0 0 chr5 16182122 16182414 -183447736 - AluJb SINE Alu -20 292 1 587 273 113 30 chr5 16182442 16182673 -183447477 + MLT1L LTR MaLR 1 250 -365 681 212 8 8 chr5 16182724 16182856 -183447294 + FRAM SINE Alu 1 132 -44 1015 123 0 11 chr5 16182859 16183038 -183447112 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 2220 136 3 0 chr5 16183583 16183892 -183446258 - AluSx SINE Alu -2 310 1 2160 81 33 0 chr5 16184438 16184709 -183445441 + AluSc SINE Alu 8 287 -22 1395 177 52 30 chr5 16184726 16184997 -183445153 + AluJo SINE Alu 1 277 -35 2431 100 0 0 chr5 16184998 16185309 -183444841 - AluSx SINE Alu -1 311 1 5609 208 52 16 chr5 16185356 16186577 -183443573 + L1M4b LINE L1 90 1353 -5506 1014 224 66 68 chr5 16186600 16187081 -183443069 + LTR10B LTR ERV1 17 542 -4 869 198 5 11 chr5 16187099 16187286 -183442864 + L1M4b LINE L1 1349 1534 -5325 2359 96 0 0 chr5 16187286 16187587 -183442563 + AluY SINE Alu 1 301 -10 246 266 21 21 chr5 16187612 16187706 -183442444 + L1M4b LINE L1 2630 2723 -4415 316 255 6 89 chr5 16187723 16187880 -183442270 + L1MEc LINE L1 1762 1905 -4491 2001 147 3 0 chr5 16187971 16188263 -183441887 - AluSx SINE Alu -19 293 1 2338 86 3 49 chr5 16188888 16189215 -183440935 + AluSp SINE Alu 1 312 -1 2051 141 0 26 chr5 16190039 16190351 -183439799 - AluSx SINE Alu -8 304 1 314 216 0 108 chr5 16190605 16190744 -183439406 - L1MEd LINE L1 -4865 1254 1131 1005 213 126 48 chr5 16190965 16191322 -183438828 - L1ME2 LINE L1 -16 6148 5764 189 404 27 14 chr5 16191579 16191725 -183438425 + L2 LINE L2 3102 3249 -23 345 305 0 11 chr5 16192837 16192932 -183437218 - MIR SINE MIR -66 142 49 625 269 13 118 chr5 16194250 16194555 -183435595 + MLT1J LTR MaLR 156 428 -83 218 274 0 0 chr5 16195055 16195106 -183435044 + GA-rich Low_complexity Low_complexity 4 54 0 189 0 0 0 chr5 16195117 16195138 -183435012 + (AATAG)n Simple_repeat Simple_repeat 2 22 0 2192 121 3 16 chr5 16195330 16195644 -183434506 + MER1B DNA MER1_type 30 339 0 663 224 12 47 chr5 16195644 16195814 -183434336 - MIR SINE MIR -64 198 35 427 254 25 25 chr5 16195912 16196034 -183434116 + L2 LINE L2 3191 3312 -1 248 198 136 25 chr5 16196255 16196336 -183433814 - MIR SINE MIR -50 212 123 756 248 135 56 chr5 16196558 16197084 -183433066 - MLT1G1 LTR MaLR -38 529 1 2111 103 11 0 chr5 16197548 16197867 -183432283 - AluSc SINE Alu 0 327 6 3179 153 9 22 chr5 16198697 16199234 -183430916 - LTR26B LTR ERV1 0 531 2 1874 227 74 16 chr5 16199370 16199779 -183430371 - MLT2B2 LTR ERVL -2 513 70 2614 62 0 0 chr5 16199779 16200087 -183430063 - AluY SINE Alu -3 308 1 1874 227 74 16 chr5 16200087 16200162 -183429988 - MLT2B2 LTR ERVL -445 70 1 320 318 26 0 chr5 16200223 16200374 -183429776 + MIR SINE MIR 98 252 -10 2258 105 0 0 chr5 16200405 16200712 -183429438 + AluSq SINE Alu 1 307 0 389 229 28 28 chr5 16201101 16201210 -183428940 - L2 LINE L2 -1 3312 3204 323 257 176 20 chr5 16201210 16201358 -183428792 - MARNA DNA Mariner -208 378 208 245 253 44 66 chr5 16201487 16201578 -183428572 - L1ME4a LINE L1 -73 6048 5960 426 309 16 0 chr5 16201774 16201897 -183428253 - MARNA DNA Mariner -393 193 69 1941 157 3 10 chr5 16203981 16204280 -183425870 + AluSx SINE Alu 3 299 -13 1118 194 144 19 chr5 16204771 16204926 -183425224 - AluJo SINE Alu -10 302 168 297 0 0 0 chr5 16204926 16204959 -183425191 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1118 194 144 19 chr5 16204959 16205066 -183425084 - AluJo SINE Alu -144 168 7 640 236 176 5 chr5 16205570 16205769 -183424381 - LTR16A LTR ERVL -193 257 25 2068 130 0 13 chr5 16206049 16206185 -183423965 + AluSx SINE Alu 1 137 -175 2252 112 3 0 chr5 16206185 16206481 -183423669 + AluSq SINE Alu 1 297 -16 2068 130 0 13 chr5 16206481 16206645 -183423505 + AluSx SINE Alu 137 297 -15 275 341 134 29 chr5 16206812 16207372 -183422778 - L2 LINE L2 -692 2622 2004 203 244 12 24 chr5 16207880 16207962 -183422188 - L2 LINE L2 -1442 1872 1792 2352 89 7 0 chr5 16208293 16208586 -183421564 + AluSp SINE Alu 1 295 -18 411 207 189 9 chr5 16208677 16208794 -183421356 - MLT1I LTR MaLR 0 446 277 398 194 61 31 chr5 16208889 16208987 -183421163 - MLT1J2 LTR MaLR -331 119 19 2434 89 0 6 chr5 16209192 16209506 -183420644 - AluSq SINE Alu 0 313 2 191 209 93 0 chr5 16209590 16209633 -183420517 + L2 LINE L2 3257 3303 -10 2034 106 40 0 chr5 16210684 16210987 -183419163 - AluSq SINE Alu 0 314 1 459 291 115 0 chr5 16211329 16211511 -183418639 - MIR SINE MIR -56 206 4 582 104 0 0 chr5 16211673 16211769 -183418381 + (TCCA)n Simple_repeat Simple_repeat 3 98 0 732 226 58 5 chr5 16214347 16214541 -183415609 - MIR SINE MIR -56 206 3 1701 201 0 0 chr5 16214576 16214878 -183415272 - AluJo SINE Alu -13 299 1 2084 113 31 7 chr5 16214941 16215232 -183414918 - AluSx SINE Alu -14 298 1 700 290 34 0 chr5 16215661 16215868 -183414282 + LTR33 LTR ERVL 1 214 -307 3986 171 23 32 chr5 16216470 16216581 -183413569 - L1MB7 LINE L1 -11 6173 6063 2156 96 0 0 chr5 16216581 16216861 -183413289 - AluSx SINE Alu -24 288 9 3986 171 23 32 chr5 16216861 16217233 -183412917 - L1MB7 LINE L1 -121 6063 5697 1621 161 12 43 chr5 16217233 16217555 -183412595 + AluJo SINE Alu 1 312 0 3986 171 23 32 chr5 16217555 16217890 -183412260 - L1MB7 LINE L1 -487 5697 5361 252 297 0 0 chr5 16217900 16217964 -183412186 - MER46C DNA MER2_type -3 335 272 2383 121 19 16 chr5 16219031 16219404 -183410746 + THE1C LTR MaLR 1 374 -1 335 217 0 0 chr5 16219684 16219744 -183410406 - MIR SINE MIR -107 101 42 818 293 111 40 chr5 16220413 16220614 -183409536 + L2 LINE L2 2771 2956 -357 2178 112 0 0 chr5 16220614 16220909 -183409241 - AluSx SINE Alu -16 296 2 818 293 111 40 chr5 16220909 16221207 -183408943 + L2 LINE L2 2956 3313 0 860 196 33 0 chr5 16221411 16221564 -183408586 - FRAM SINE Alu -5 161 4 231 167 0 0 chr5 16222119 16222161 -183407989 + (CA)n Simple_repeat Simple_repeat 2 43 0 2214 87 0 3 chr5 16223319 16223628 -183406522 - AluY SINE Alu -3 308 1 2253 62 31 0 chr5 16223630 16223920 -183406230 - AluSc SINE Alu -10 299 1 6530 168 28 54 chr5 16224492 16225923 -183404227 - L1MC3 LINE L1 -2 7783 6390 32 0 0 0 chr5 16227009 16227041 -183403109 + GC_rich Low_complexity Low_complexity 1 32 0 203 157 61 43 chr5 16227050 16227165 -183402985 + (CGCGG)n Simple_repeat Simple_repeat 5 121 0 * 234 296 0 0 chr5 16227144 16227242 -183402908 + (CCG)n Simple_repeat Simple_repeat 1 98 0 25 51 0 0 chr5 16228022 16228061 -183402089 + GC_rich Low_complexity Low_complexity 1 39 0 189 0 0 0 chr5 16228349 16228370 -183401780 + (CGG)n Simple_repeat Simple_repeat 2 22 0 387 283 99 81 chr5 16229926 16230209 -183399941 + L3 LINE CR1 1286 1573 -4 279 352 62 25 chr5 16230609 16230771 -183399379 - MIR3 SINE MIR -31 177 10 710 219 113 42 chr5 16233623 16233861 -183396289 + L1ME1 LINE L1 5862 6116 -50 301 257 183 15 chr5 16233923 16234125 -183396025 + L1ME LINE L1 5197 5437 -684 381 75 0 0 chr5 16234813 16234866 -183395284 + (TG)n Simple_repeat Simple_repeat 2 54 0 186 43 0 0 chr5 16235746 16235769 -183394381 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2123 82 0 7 chr5 16235800 16236111 -183394039 - AluSg1 SINE Alu 0 312 4 5871 202 71 44 chr5 16238636 16240172 -183389978 - L1MC4 LINE L1 -76 7966 6390 915 164 0 4 chr5 16240825 16241070 -183389080 + CT-rich Low_complexity Low_complexity 1 244 0 1632 176 17 10 chr5 16241082 16241378 -183388772 - AluJb SINE Alu -14 298 1 2171 96 0 0 chr5 16241635 16241928 -183388222 + AluSc SINE Alu 1 293 -16 248 204 23 102 chr5 16241952 16242040 -183388110 + L1MB7 LINE L1 5996 6076 -108 1667 167 3 22 chr5 16242040 16242358 -183387792 + AluJo SINE Alu 1 312 0 299 272 99 7 chr5 16242409 16242546 -183387604 - MIR SINE MIR -49 213 64 2129 87 20 13 chr5 16243057 16243356 -183386794 - AluSc SINE Alu -8 301 1 1908 124 21 0 chr5 16244406 16244697 -183385453 - AluSx SINE Alu -15 297 1 319 258 96 107 chr5 16245095 16245229 -183384921 - MER5B DNA MER1_type -2 176 43 1352 216 28 0 chr5 16245229 16245511 -183384639 - AluJo SINE Alu -22 290 1 319 258 96 107 chr5 16245511 16245554 -183384596 - MER5B DNA MER1_type -135 43 1 1690 114 51 89 chr5 16246293 16246492 -183383658 - AluSg SINE Alu -6 304 120 2675 87 5 23 chr5 16246492 16246881 -183383269 - L1PA8 LINE L1 -3 6169 5788 1690 114 51 89 chr5 16246881 16246997 -183383153 - AluSg SINE Alu -190 120 1 2622 142 47 2 chr5 16248612 16249055 -183381095 - L1PA16 LINE L1 0 6166 5704 202 229 0 0 chr5 16250098 16250133 -183380017 + MIR SINE MIR 218 252 -10 183 129 0 0 chr5 16252718 16252749 -183377401 + (T)n Simple_repeat Simple_repeat 1 31 0 201 74 0 0 chr5 16253529 16253556 -183376594 + (GGGAGA)n Simple_repeat Simple_repeat 1 27 0 236 255 0 0 chr5 16253956 16254003 -183376147 - L2 LINE L2 -2 3270 3224 1902 125 16 0 chr5 16254020 16254325 -183375825 - AluSx SINE Alu -2 310 1 2383 121 19 16 chr5 16255474 16255847 -183374303 - THE1C LTR MaLR -1 374 1 252 297 0 0 chr5 16256914 16256978 -183373172 + MER46C DNA MER2_type 272 335 -3 3986 171 23 32 chr5 16256988 16257323 -183372827 + L1MB7 LINE L1 5361 5697 -487 1589 171 12 40 chr5 16257323 16257644 -183372506 - AluJo SINE Alu 0 312 1 3986 171 23 32 chr5 16257644 16258016 -183372134 + L1MB7 LINE L1 5697 6063 -121 2156 96 0 0 chr5 16258016 16258296 -183371854 + AluSx SINE Alu 9 288 -24 3986 171 23 32 chr5 16258296 16258407 -183371743 + L1MB7 LINE L1 6063 6173 -11 700 290 34 0 chr5 16259009 16259216 -183370934 - LTR33 LTR ERVL -307 214 1 1952 124 31 0 chr5 16259645 16259936 -183370214 + AluSx SINE Alu 1 300 -12 1596 202 0 0 chr5 16259999 16260301 -183369849 + AluJo SINE Alu 1 302 -10 820 258 50 50 chr5 16260336 16260596 -183369554 + MIR SINE MIR 3 262 0 582 104 0 0 chr5 16263108 16263204 -183366946 + (TGGA)n Simple_repeat Simple_repeat 3 98 0 554 295 109 0 chr5 16263366 16263549 -183366601 + MIR SINE MIR 4 206 -56 2225 69 31 0 chr5 16263892 16264182 -183365968 + AluSc SINE Alu 1 299 -10 2214 87 0 3 chr5 16264184 16264493 -183365657 + AluY SINE Alu 1 308 -3 231 167 0 0 chr5 16265653 16265695 -183364455 + (TG)n Simple_repeat Simple_repeat 2 43 0 885 196 33 0 chr5 16266250 16266403 -183363747 + FRAM SINE Alu 4 161 -5 830 293 111 40 chr5 16266607 16266905 -183363245 - L2 LINE L2 0 3313 2956 2327 112 0 0 chr5 16266905 16267200 -183362950 + AluSx SINE Alu 2 296 -16 830 293 111 40 chr5 16267200 16267401 -183362749 - L2 LINE L2 -357 2956 2771 245 234 0 0 chr5 16268070 16268117 -183362033 + MIR SINE MIR 42 88 -120 180 77 0 0 chr5 16268805 16268831 -183361319 + (TTG)n Simple_repeat Simple_repeat 2 27 0 255 303 11 22 chr5 16269082 16269171 -183360979 + C-rich Low_complexity Low_complexity 5 92 0 22 35 0 0 chr5 16269793 16269822 -183360328 + AT_rich Low_complexity Low_complexity 1 29 0 1646 143 6 99 chr5 16270044 16270358 -183359792 + AluJo SINE Alu 13 297 -15 475 254 25 25 chr5 16271142 16271264 -183358886 + L2 LINE L2 3191 3312 -1 278 198 136 25 chr5 16271484 16271565 -183358585 - MIR SINE MIR -50 212 123 692 252 135 58 chr5 16271787 16272314 -183357836 - MLT1G1 LTR MaLR -38 529 1 2136 118 10 0 chr5 16272762 16273097 -183357053 - AluSc SINE Alu 0 309 6 2912 150 13 42 chr5 16273929 16274475 -183355675 - LTR26B LTR ERV1 0 531 2 1391 223 62 101 chr5 16274611 16275069 -183355081 - MLT2B2 LTR ERVL -2 513 77 2404 70 0 0 chr5 16275069 16275354 -183354796 - AluY SINE Alu -26 285 1 1391 223 62 101 chr5 16275354 16275429 -183354721 - MLT2B2 LTR ERVL -438 77 1 399 318 26 0 chr5 16275490 16275641 -183354509 + MIR SINE MIR 98 252 -10 2275 105 0 0 chr5 16275672 16275979 -183354171 + AluSq SINE Alu 1 307 0 437 229 28 28 chr5 16276368 16276477 -183353673 - L2 LINE L2 -1 3312 3204 288 257 176 20 chr5 16276477 16276625 -183353525 - MARNA DNA Mariner -208 378 208 264 231 44 66 chr5 16276754 16276845 -183353305 - L1ME4a LINE L1 -73 6048 5960 407 303 15 8 chr5 16277041 16277173 -183352977 - MARNA DNA Mariner -393 193 61 1971 157 3 10 chr5 16279249 16279548 -183350602 + AluSx SINE Alu 3 299 -13 1146 194 144 19 chr5 16280038 16280193 -183349957 - AluJo SINE Alu -10 302 168 378 0 0 0 chr5 16280193 16280235 -183349915 + (TTA)n Simple_repeat Simple_repeat 1 42 0 1146 194 144 19 chr5 16280235 16280342 -183349808 - AluJo SINE Alu -144 168 7 582 261 171 0 chr5 16280845 16281044 -183349106 - LTR16A LTR ERVL -193 257 25 2092 130 0 13 chr5 16281324 16281460 -183348690 + AluSx SINE Alu 1 137 -175 2297 108 3 0 chr5 16281460 16281757 -183348393 + AluSq SINE Alu 1 298 -15 2092 130 0 13 chr5 16281757 16281921 -183348229 + AluSx SINE Alu 137 297 -15 451 340 134 28 chr5 16282042 16282648 -183347502 - L2 LINE L2 -641 2673 2004 237 244 12 24 chr5 16283156 16283238 -183346912 - L2 LINE L2 -1442 1872 1792 2353 100 7 0 chr5 16283569 16283869 -183346281 + AluSp SINE Alu 1 302 -11 376 191 99 13 chr5 16283953 16284070 -183346080 - MLT1I LTR MaLR 0 446 277 374 194 61 31 chr5 16284165 16284263 -183345887 - MLT1J2 LTR MaLR -331 119 19 2422 93 0 6 chr5 16284468 16284781 -183345369 - AluSq SINE Alu -1 312 2 212 209 93 0 chr5 16284865 16284908 -183345242 + L2 LINE L2 3257 3303 -10 193 289 87 87 chr5 16285423 16285527 -183344623 - L2 LINE L2 -9 3304 3201 2046 106 40 0 chr5 16285959 16286267 -183343883 - AluSq SINE Alu 0 319 1 561 304 99 10 chr5 16286592 16286793 -183343357 - MIR SINE MIR -40 222 4 546 109 0 0 chr5 16286955 16287047 -183343103 + (TCCA)n Simple_repeat Simple_repeat 3 94 0 819 258 50 50 chr5 16289559 16289819 -183340331 - MIR SINE MIR 0 262 3 1691 209 0 0 chr5 16289854 16290156 -183339994 - AluJo SINE Alu -10 302 1 2114 120 31 0 chr5 16290219 16290510 -183339640 - AluSx SINE Alu -12 300 1 652 290 34 0 chr5 16290939 16291146 -183339004 + LTR33 LTR ERVL 1 214 -307 3732 171 23 35 chr5 16291748 16291859 -183338291 - L1MB7 LINE L1 -11 6173 6062 2281 100 0 0 chr5 16291859 16292139 -183338011 - AluSx SINE Alu -24 288 9 3732 171 23 35 chr5 16292139 16292511 -183337639 - L1MB7 LINE L1 -122 6062 5702 1765 166 12 44 chr5 16292511 16292831 -183337319 + AluJo SINE Alu 1 310 -2 3732 171 23 35 chr5 16292831 16293169 -183336981 - L1MB7 LINE L1 -482 5702 5361 239 297 0 0 chr5 16293179 16293243 -183336907 - MER46C DNA MER2_type -3 335 272 2403 121 19 16 chr5 16294310 16294683 -183335467 + THE1C LTR MaLR 1 374 -1 337 217 0 0 chr5 16294963 16295023 -183335127 - MIR SINE MIR -107 101 42 825 293 111 40 chr5 16295692 16295893 -183334257 + L2 LINE L2 2771 2956 -357 2327 112 0 0 chr5 16295893 16296188 -183333962 - AluSx SINE Alu -16 296 2 825 293 111 40 chr5 16296188 16296486 -183333664 + L2 LINE L2 2956 3313 0 870 199 33 0 chr5 16296690 16296841 -183333309 - FRAM SINE Alu -7 159 4 231 167 0 0 chr5 16297396 16297438 -183332712 + (CA)n Simple_repeat Simple_repeat 2 43 0 181 264 28 69 chr5 16297640 16297712 -183332438 - L2 LINE L2 -209 3063 2995 2332 91 0 3 chr5 16298596 16298905 -183331245 - AluY SINE Alu -3 308 1 2483 60 30 0 chr5 16298913 16299213 -183330937 - AluSc SINE Alu 0 309 1 6146 168 28 54 chr5 16299785 16301216 -183328934 - L1MC3 LINE L1 -2 7783 6390 32 0 0 0 chr5 16302302 16302334 -183327816 + GC_rich Low_complexity Low_complexity 1 32 0 203 157 61 43 chr5 16302343 16302458 -183327692 + (CGCGG)n Simple_repeat Simple_repeat 5 121 0 * 234 296 0 0 chr5 16302437 16302535 -183327615 + (CCG)n Simple_repeat Simple_repeat 1 98 0 25 51 0 0 chr5 16303314 16303353 -183326797 + GC_rich Low_complexity Low_complexity 1 39 0 189 0 0 0 chr5 16303641 16303662 -183326488 + (CGG)n Simple_repeat Simple_repeat 2 22 0 398 283 99 81 chr5 16305218 16305501 -183324649 + L3 LINE CR1 1286 1573 -4 288 352 62 25 chr5 16305901 16306063 -183324087 - MIR3 SINE MIR -31 177 10 660 235 101 29 chr5 16308916 16309154 -183320996 + L1ME1 LINE L1 5862 6116 -50 225 149 64 0 chr5 16309371 16309418 -183320732 + L1ME LINE L1 5388 5437 -684 363 78 0 0 chr5 16310106 16310157 -183319993 + (TG)n Simple_repeat Simple_repeat 2 52 0 186 43 0 0 chr5 16311037 16311060 -183319090 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2257 82 0 7 chr5 16311091 16311402 -183318748 - AluSg1 SINE Alu 0 312 4 5298 203 77 43 chr5 16313910 16315434 -183314716 - L1MC4 LINE L1 -76 7966 6390 537 185 0 0 chr5 16316087 16316206 -183313944 + CT-rich Low_complexity Low_complexity 2 120 0 954 144 0 0 chr5 16316207 16316387 -183313763 + (TC)n Simple_repeat Simple_repeat 1 180 0 1769 170 17 10 chr5 16316387 16316675 -183313475 - AluJb SINE Alu -22 290 1 2310 96 0 0 chr5 16316929 16317222 -183312928 + AluSc SINE Alu 1 293 -16 256 204 23 102 chr5 16317246 16317334 -183312816 + L1MB7 LINE L1 5996 6076 -108 1844 168 3 16 chr5 16317334 16317650 -183312500 + AluJo SINE Alu 1 312 0 275 279 99 7 chr5 16317701 16317838 -183312312 - MIR SINE MIR -49 213 64 2218 90 20 13 chr5 16318349 16318648 -183311502 - AluSc SINE Alu -8 301 1 2017 124 21 0 chr5 16319697 16319988 -183310162 - AluSx SINE Alu -15 297 1 312 258 96 107 chr5 16320386 16320520 -183309630 - MER5A DNA MER1_type -2 187 43 1424 216 28 0 chr5 16320520 16320802 -183309348 - AluJo SINE Alu -22 290 1 312 258 96 107 chr5 16320802 16320845 -183309305 - MER5A DNA MER1_type -146 43 1 1904 114 53 37 chr5 16321583 16321759 -183308391 - AluSg SINE Alu -6 304 132 197 33 33 0 chr5 16321759 16321789 -183308361 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2939 88 0 13 chr5 16321794 16322171 -183307979 - L1PA8 LINE L1 -13 6159 5788 1904 114 53 37 chr5 16322171 16322287 -183307863 - AluSg SINE Alu -181 129 1 2778 142 47 2 chr5 16323902 16324345 -183305805 - L1PA16 LINE L1 0 6166 5704 196 229 0 0 chr5 16325386 16325421 -183304729 + MIR SINE MIR 218 252 -10 201 74 0 0 chr5 16328791 16328818 -183301332 + (GGGAGA)n Simple_repeat Simple_repeat 1 27 0 195 204 114 0 chr5 16329218 16329262 -183300888 - L2 LINE L2 0 3272 3224 1986 125 16 0 chr5 16329279 16329582 -183300568 - AluSx SINE Alu -4 308 1 2041 97 38 60 chr5 16331970 16332289 -183297861 - AluSx SINE Alu 0 312 1 1106 216 151 26 chr5 16333542 16333927 -183296223 + Charlie4a DNA MER1_type 39 471 -37 476 92 0 40 chr5 16334010 16334086 -183296064 - L1PA8 LINE L1 -6 6166 6094 708 156 0 74 chr5 16334800 16334935 -183295215 + FLAM_C SINE Alu 2 126 -7 2391 65 3 0 chr5 16334967 16335257 -183294893 + AluY SINE Alu 1 291 -20 1372 161 88 19 chr5 16335259 16335520 -183294630 - AluJb SINE Alu -33 279 1 420 320 31 0 chr5 16337279 16337407 -183292743 + MER94 DNA DNA 1 132 -2 22 0 0 0 chr5 16338195 16338217 -183291933 + AT_rich Low_complexity Low_complexity 1 22 0 1246 154 133 87 chr5 16338226 16338512 -183291638 - AluJb SINE Alu -3 299 1 2275 91 0 28 chr5 16338588 16338907 -183291243 + AluSx SINE Alu 3 312 0 1735 164 15 0 chr5 16339333 16339601 -183290549 + AluJo SINE Alu 1 272 -40 409 312 59 15 chr5 16340765 16340967 -183289183 - L3 LINE CR1 -700 877 667 2135 138 0 0 chr5 16345350 16345654 -183284496 - AluSx SINE Alu -8 304 1 549 211 99 14 chr5 16347091 16347233 -183282917 - MIR SINE MIR -108 154 1 1734 151 31 17 chr5 16348505 16348797 -183281353 - AluJo SINE Alu -15 297 2 407 165 12 27 chr5 16350087 16350330 -183279820 + AluJo SINE Alu 1 301 -11 1501 152 0 69 chr5 16351020 16351309 -183278841 - AluJb SINE Alu -4 308 40 3125 224 87 50 chr5 16353557 16354626 -183275524 - L1MC4 LINE L1 0 8042 6935 2366 92 0 7 chr5 16354912 16355217 -183274933 + AluSx SINE Alu 1 303 -9 309 191 174 61 chr5 16355423 16355538 -183274612 - MIR SINE MIR -116 146 19 181 282 14 14 chr5 16356082 16356153 -183273997 + L2 LINE L2 3182 3252 -20 265 246 0 18 chr5 16356278 16356335 -183273815 - LTR67 LTR ERVL -3 554 499 2420 202 58 22 chr5 16356362 16356863 -183273287 - LTR40a LTR ERVL 0 519 1 279 257 134 37 chr5 16356882 16357069 -183273081 - L1ME4a LINE L1 -67 6054 5850 222 243 27 40 chr5 16357167 16357241 -183272909 - MIR3 SINE MIR -1 207 135 1700 124 158 0 chr5 16357729 16357994 -183272156 + AluSx SINE Alu 1 307 -5 341 288 97 45 chr5 16359050 16359338 -183270812 + L2 LINE L2 3011 3313 0 2452 77 3 6 chr5 16359751 16360064 -183270086 + AluSp SINE Alu 1 312 -1 2189 53 15 0 chr5 16360639 16360904 -183269246 + L1PA4 LINE L1 5887 6155 0 1229 67 6 39 chr5 16361017 16361195 -183268955 - MER30 DNA MER1_type -58 172 1 1809 142 14 142 chr5 16361264 16361681 -183268469 + THE1B LTR MaLR 1 364 0 26 50 0 0 chr5 16361692 16361732 -183268418 + AT_rich Low_complexity Low_complexity 1 40 0 269 232 53 53 chr5 16361742 16361837 -183268313 + MLT1H LTR MaLR 454 548 -1 443 307 98 16 chr5 16361843 16362087 -183268063 + MARNA DNA Mariner 228 491 -95 606 212 35 24 chr5 16363533 16363703 -183266447 + MIR SINE MIR 86 257 -5 2037 134 3 7 chr5 16364496 16364795 -183265355 - AluSx SINE Alu -14 298 1 1552 189 10 7 chr5 16364820 16365122 -183265028 - AluJb SINE Alu -9 303 1 585 232 138 6 chr5 16365728 16365909 -183264241 + L1ME1 LINE L1 4992 5196 -950 782 147 17 0 chr5 16365911 16366027 -183264123 + FLAM_C SINE Alu 3 120 -23 418 129 12 59 chr5 16366027 16366197 -183263953 + (CA)n Simple_repeat Simple_repeat 1 162 0 335 122 10 31 chr5 16366225 16366323 -183263827 + (CA)n Simple_repeat Simple_repeat 2 97 0 866 178 0 33 chr5 16366325 16366477 -183263673 + FRAM SINE Alu 1 146 -30 180 0 0 0 chr5 16366477 16366497 -183263653 + (GA)n Simple_repeat Simple_repeat 2 21 0 3295 194 57 16 chr5 16366497 16367324 -183262826 + L1ME1 LINE L1 5195 6044 -122 1126 214 148 28 chr5 16367325 16367684 -183262466 + MER57B LTR ERV1 1 402 -32 262 221 151 0 chr5 16367852 16367938 -183262212 - MIR SINE MIR -92 170 72 180 77 0 0 chr5 16369368 16369394 -183260756 + (TTG)n Simple_repeat Simple_repeat 2 27 0 255 303 11 22 chr5 16369645 16369734 -183260416 + C-rich Low_complexity Low_complexity 5 92 0 21 36 0 0 chr5 16370356 16370384 -183259766 + AT_rich Low_complexity Low_complexity 1 28 0 1598 156 6 95 chr5 16370594 16370920 -183259230 + AluJo SINE Alu 1 297 -15 213 193 18 35 chr5 16371970 16372027 -183258123 + CT-rich Low_complexity Low_complexity 5 60 0 259 192 10 40 chr5 16372057 16372156 -183257994 + (TA)n Simple_repeat Simple_repeat 2 97 0 246 333 56 0 chr5 16374287 16374377 -183255773 + MIR3 SINE MIR 108 202 -6 788 262 104 9 chr5 16374671 16374892 -183255258 + MIR SINE MIR 12 253 -9 305 247 75 0 chr5 16375635 16375728 -183254422 - MIR SINE MIR -156 106 7 260 290 97 11 chr5 16378410 16378503 -183251647 + MER5A DNA MER1_type 26 126 -63 269 212 68 76 chr5 16378597 16378715 -183251435 - MER112 DNA MER1_type -65 195 79 210 143 0 0 chr5 16378787 16378822 -183251328 + (TTC)n Simple_repeat Simple_repeat 2 36 0 14371 116 50 25 chr5 16378823 16381111 -183249039 + Tigger1 DNA MER2_type 55 2399 -19 334 203 0 0 chr5 16381114 16381178 -183248972 - MER112 DNA MER1_type -193 67 4 246 308 128 15 chr5 16381326 16381459 -183248691 + MER5A DNA MER1_type 40 187 -2 * 330 286 34 25 chr5 16381354 16381473 -183248677 - MER5A DNA MER1_type -67 122 3 187 238 0 0 chr5 16381944 16381986 -183248164 + MIR3 SINE MIR 162 203 -5 25 0 0 0 chr5 16382930 16382955 -183247195 + AT_rich Low_complexity Low_complexity 1 25 0 36 23 0 0 chr5 16383048 16383091 -183247059 + AT_rich Low_complexity Low_complexity 1 43 0 204 236 67 34 chr5 16383688 16383777 -183246373 + MIR3 SINE MIR 81 172 -36 1436 185 114 81 chr5 16384077 16384651 -183245499 - MLT1E1 LTR MaLR -13 641 2 1021 78 0 0 chr5 16387553 16387681 -183242469 + AluSg/x SINE Alu 179 306 -6 24 32 0 0 chr5 16387873 16387904 -183242246 + AT_rich Low_complexity Low_complexity 1 31 0 482 222 141 65 chr5 16388015 16388200 -183241950 - MER58A DNA MER1_type -17 207 9 607 256 43 6 chr5 16388882 16389046 -183241104 - MER20B DNA MER1_type -326 457 288 318 26 0 0 chr5 16389123 16389162 -183240988 + (TG)n Simple_repeat Simple_repeat 2 40 0 260 156 0 0 chr5 16389199 16389244 -183240906 - MER20B DNA MER1_type -696 87 43 254 247 34 45 chr5 16389716 16389805 -183240345 + MIR SINE MIR 139 226 -36 383 237 86 20 chr5 16390810 16390962 -183239188 - MIR SINE MIR -36 226 65 237 231 333 8 chr5 16391266 16391383 -183238767 + L2 LINE L2 3159 3313 0 1779 163 0 30 chr5 16391989 16392290 -183237860 + AluJb SINE Alu 5 296 -16 603 150 42 58 chr5 16392420 16392540 -183237610 - AluJo SINE Alu -108 204 87 1455 186 39 39 chr5 16392566 16392878 -183237272 - AluJo SINE Alu 0 312 1 28 86 0 0 chr5 16393694 16393764 -183236386 + AT_rich Low_complexity Low_complexity 1 70 0 193 371 63 25 chr5 16394154 16394313 -183235837 + MIR SINE MIR 34 198 -64 24 0 0 0 chr5 16394596 16394620 -183235530 + AT_rich Low_complexity Low_complexity 1 24 0 842 143 0 16 chr5 16394620 16394746 -183235404 - FLAM_C SINE Alu -5 128 5 835 200 126 33 chr5 16395480 16395695 -183234455 - L1MB8 LINE L1 -5 6173 5939 1214 176 8 64 chr5 16395885 16396135 -183234015 - MER46A DNA MER2_type 0 236 1 261 295 50 58 chr5 16397598 16397737 -183232413 + MIR SINE MIR 36 173 -89 277 289 134 43 chr5 16398303 16398490 -183231660 - MIR SINE MIR -48 214 11 22 0 0 0 chr5 16400433 16400455 -183229695 + AT_rich Low_complexity Low_complexity 1 22 0 731 283 68 0 chr5 16400776 16400995 -183229155 - MIR SINE MIR -22 240 7 1038 186 10 29 chr5 16401372 16401576 -183228574 - AluJo SINE Alu -26 286 87 2357 96 0 0 chr5 16406569 16406870 -183223280 + AluSg SINE Alu 1 301 -9 203 323 62 8 chr5 16407530 16407660 -183222490 - MIR SINE MIR -30 232 96 291 274 69 10 chr5 16407740 16407842 -183222308 - L2 LINE L2 -10 3262 3155 304 303 138 0 chr5 16409630 16409739 -183220411 - MIR SINE MIR -49 213 90 1469 152 65 14 chr5 16412149 16412426 -183217724 - AluJb SINE Alu -21 291 1 1514 229 98 10 chr5 16412474 16412872 -183217278 + Charlie1b DNA MER1_type 1 433 -90 291 200 46 15 chr5 16412902 16412967 -183217183 + Charlie1b DNA MER1_type 411 477 -46 1556 81 61 0 chr5 16412984 16413182 -183216968 - AluSg/x SINE Alu -29 281 72 538 262 74 37 chr5 16414121 16414322 -183215828 + L1ME3 LINE L1 5696 5909 -261 2187 143 37 8 chr5 16414322 16414673 -183215477 - MER46B DNA MER2_type 0 236 1 538 262 74 37 chr5 16414673 16414715 -183215435 + L1ME3 LINE L1 5909 5948 -222 2278 163 60 8 chr5 16414792 16415192 -183214958 - MSTB LTR MaLR -5 421 1 259 250 56 69 chr5 16415193 16415337 -183214813 + L1ME3 LINE L1 5955 6096 -66 250 306 20 10 chr5 16416767 16416865 -183213285 - MIR SINE MIR -119 143 45 212 260 0 0 chr5 16422514 16422564 -183207586 + (TATG)n Simple_repeat Simple_repeat 3 52 0 21 57 0 0 chr5 16422938 16422973 -183207177 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 16423297 16423325 -183206825 + AT_rich Low_complexity Low_complexity 1 28 0 21 82 0 0 chr5 16424193 16424242 -183205908 + AT_rich Low_complexity Low_complexity 1 49 0 192 135 0 0 chr5 16424802 16424839 -183205311 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 1522 158 19 15 chr5 16424840 16425106 -183205044 - AluSx SINE Alu -5 307 41 250 303 53 0 chr5 16425130 16425206 -183204944 - L2 LINE L2 -11 3302 3223 478 223 10 114 chr5 16428108 16428301 -183201849 - L1ME LINE L1 -5460 610 438 299 239 145 8 chr5 16428346 16428463 -183201687 - L1ME LINE L1 -5853 217 85 813 176 149 0 chr5 16431730 16431918 -183198232 - L1MB7 LINE L1 -16 6168 5953 721 176 171 9 chr5 16432267 16432475 -183197675 + MLT1A1 LTR MaLR 1 249 -125 2512 241 143 51 chr5 16432636 16433941 -183196209 - L1MC5 LINE L1 -36 7925 6512 268 262 70 66 chr5 16434345 16434589 -183195561 - L1MC4a LINE L1 -1778 6030 5786 267 157 0 0 chr5 16434643 16434694 -183195456 + (TA)n Simple_repeat Simple_repeat 2 52 0 235 125 54 0 chr5 16434699 16434755 -183195395 + L1MCa LINE L1 2006 2064 -4362 219 186 0 0 chr5 16434756 16434799 -183195351 + (TA)n Simple_repeat Simple_repeat 1 43 0 416 262 35 28 chr5 16435919 16436060 -183194090 - L2 LINE L2 -73 3240 3099 189 0 0 0 chr5 16436115 16436136 -183194014 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 238 314 85 8 chr5 16437755 16437873 -183192277 + MIR SINE MIR 100 226 -36 2032 133 151 34 chr5 16439935 16440318 -183189832 - MSTA LTR MaLR 0 428 1 612 217 76 14 chr5 16441345 16441552 -183188598 - L1MD3 LINE L1 -2 7993 7720 271 307 109 0 chr5 16442182 16442319 -183187831 + MIR SINE MIR 84 235 -27 198 0 0 0 chr5 16442546 16442568 -183187582 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 285 225 167 51 chr5 16444862 16445000 -183185150 - Charlie1 DNA MER1_type -1189 1572 1419 2480 58 3 0 chr5 16447169 16447461 -183182689 + AluY SINE Alu 1 293 -18 1105 187 53 78 chr5 16447741 16447887 -183182263 + AluJo SINE Alu 1 138 -174 2209 103 10 0 chr5 16447887 16448187 -183181963 + AluSq SINE Alu 1 303 -10 1105 187 53 78 chr5 16448187 16448324 -183181826 + AluJo SINE Alu 138 277 -35 24 0 0 29 chr5 16448332 16448347 -183181803 + AT_rich Low_complexity Low_complexity 1 15 -19 2117 120 3 7 chr5 16448347 16448639 -183181511 + AluSx SINE Alu 1 291 -21 24 0 0 29 chr5 16448639 16448658 -183181492 + AT_rich Low_complexity Low_complexity 15 34 0 1977 181 36 0 chr5 16449902 16450238 -183179912 - MER7A DNA MER2_type 0 346 1 184 274 39 0 chr5 16450437 16450488 -183179662 - L2 LINE L2 -15 3298 3246 21 36 0 0 chr5 16451322 16451350 -183178800 + AT_rich Low_complexity Low_complexity 1 28 0 189 307 46 46 chr5 16451883 16452101 -183178049 - L2 LINE L2 -221 3051 2834 2857 107 0 3 chr5 16452430 16452795 -183177355 + THE1B LTR MaLR 1 364 0 205 200 200 63 chr5 16452840 16452935 -183177215 + L2 LINE L2 3165 3272 0 605 261 113 15 chr5 16454200 16454403 -183175747 - MIR SINE MIR -12 250 28 659 287 143 0 chr5 16456935 16457158 -183172992 - MIR SINE MIR -2 260 6 235 307 160 20 chr5 16458751 16458901 -183171249 - MIR3 SINE MIR -21 187 17 2397 73 0 0 chr5 16459779 16460065 -183170085 - AluSx SINE Alu -12 300 15 2291 272 123 26 chr5 16461190 16462314 -183167836 - L1MC4 LINE L1 0 7808 6613 750 200 7 5 chr5 16462318 16462887 -183167263 + (TCCA)n Simple_repeat Simple_repeat 1 570 0 349 251 6 12 chr5 16462961 16463124 -183167026 + (CCCA)n Simple_repeat Simple_repeat 2 163 0 599 244 80 24 chr5 16463124 16463337 -183166813 - L1MC4 LINE L1 -1355 6687 6463 199 273 0 0 chr5 16463751 16463795 -183166355 - L2 LINE L2 -22 3250 3207 319 269 9 19 chr5 16463828 16463936 -183166214 + T-rich Low_complexity Low_complexity 3 109 0 2141 116 0 10 chr5 16464727 16465021 -183165129 - AluSx SINE Alu -21 291 1 22 0 0 0 chr5 16466622 16466644 -183163506 + AT_rich Low_complexity Low_complexity 1 22 0 299 218 85 128 chr5 16467760 16467948 -183162202 - MER3 DNA MER1_type 0 209 30 277 274 66 28 chr5 16471804 16471910 -183158240 + MER5A DNA MER1_type 23 132 -57 657 271 92 75 chr5 16474440 16474894 -183155256 - MLT1J LTR MaLR -49 462 1 1194 295 45 22 chr5 16475018 16475526 -183154624 - MER20B DNA MER1_type 0 783 264 2396 67 0 10 chr5 16476144 16476443 -183153707 - AluSc SINE Alu -13 296 1 22 35 0 0 chr5 16477002 16477031 -183153119 + AT_rich Low_complexity Low_complexity 1 29 0 232 250 15 15 chr5 16477249 16477317 -183152833 + (TG)n Simple_repeat Simple_repeat 1 68 0 2154 100 50 13 chr5 16478602 16478737 -183151413 + AluSx SINE Alu 1 130 -182 2256 107 0 3 chr5 16478737 16479037 -183151113 + AluSx SINE Alu 1 299 -13 2154 100 50 13 chr5 16479037 16479202 -183150948 + AluSx SINE Alu 130 312 0 1208 131 0 0 chr5 16479202 16479370 -183150780 + AluSg/x SINE Alu 132 299 -13 1510 214 14 103 chr5 16540267 16540860 -183089290 + L1M4 LINE L1 2314 2853 -3293 649 178 78 0 chr5 16543669 16543798 -183086352 - FLAM_A SINE Alu -3 139 1 283 308 22 22 chr5 16543851 16543942 -183086208 + L2 LINE L2 3198 3288 -25 998 192 9 57 chr5 16544136 16544365 -183085785 - MER20B DNA MER1_type 0 219 2 1228 182 40 121 chr5 16544632 16545028 -183085122 + MLT1A1 LTR MaLR 1 364 -1 1301 67 0 0 chr5 16546499 16546663 -183083487 + L1PA4 LINE L1 5989 6152 -3 5148 94 42 7 chr5 16546666 16547398 -183082752 + L1PA7 LINE L1 5384 6141 -13 207 0 0 0 chr5 16547960 16547983 -183082167 + (TA)n Simple_repeat Simple_repeat 1 23 0 393 212 25 76 chr5 16549613 16549731 -183080419 - MIR3 SINE MIR -31 177 66 2009 121 10 0 chr5 16552994 16553291 -183076859 - AluSx SINE Alu -12 300 1 242 306 22 72 chr5 16553292 16553472 -183076678 + MIR3 SINE MIR 36 206 -2 2065 157 48 45 chr5 16554754 16555195 -183074955 - MER65A LTR ERV1 0 445 4 708 218 0 0 chr5 16555665 16555798 -183074352 + FLAM_A SINE Alu 1 133 0 280 250 33 94 chr5 16556097 16556277 -183073873 - L2 LINE L2 0 3313 3145 2583 178 36 4 chr5 16557719 16558214 -183071936 + L1MB5 LINE L1 5656 6166 -8 545 132 28 0 chr5 16558231 16558337 -183071813 + L1MA8 LINE L1 6183 6291 0 474 242 11 0 chr5 16558396 16558491 -183071659 - MIR SINE MIR -86 176 81 426 286 140 12 chr5 16558497 16558668 -183071482 - MIR3 SINE MIR 0 208 16 253 351 36 56 chr5 16559569 16559820 -183070330 - L2 LINE L2 -189 3083 2838 2298 81 3 0 chr5 16560104 16560411 -183069739 + AluSx SINE Alu 1 308 -4 2524 159 28 30 chr5 16561843 16562316 -183067834 + MER70A LTR ERVL 1 472 0 3077 191 46 3 chr5 16562316 16563389 -183066761 + MER70A-int LTR ERVL 1 1191 -3832 1864 186 40 40 chr5 16563410 16563835 -183066315 + MER70A-int LTR ERVL 2387 2811 -2212 * 5461 164 31 41 chr5 16563820 16564552 -183065598 + MER70A-int LTR ERVL 2947 3685 -1338 1996 174 88 8 chr5 16564552 16564948 -183065202 + MSTA LTR MaLR 1 428 0 5461 164 31 41 chr5 16564948 16565150 -183065000 + MER70A-int LTR ERVL 3685 3888 -1135 2173 119 3 0 chr5 16565150 16565461 -183064689 - AluSx SINE Alu 0 312 1 5461 164 31 41 chr5 16565461 16565917 -183064233 + MER70A-int LTR ERVL 3888 4347 -676 963 51 7 15 chr5 16565917 16566054 -183064096 - L1PA4 LINE L1 0 6155 6020 5461 164 31 41 chr5 16566054 16566525 -183063625 + MER70A-int LTR ERVL 4347 4882 -141 2208 209 15 0 chr5 16566525 16566937 -183063213 + MER70A LTR ERVL 55 472 0 2060 92 3 38 chr5 16567383 16567699 -183062451 + AluSp SINE Alu 3 307 -6 217 253 76 38 chr5 16568114 16568193 -183061957 + L2 LINE L2 2412 2493 -821 1053 137 22 22 chr5 16570624 16570806 -183059344 + AluJb SINE Alu 116 297 -15 2541 65 0 10 chr5 16571667 16571976 -183058174 + AluY SINE Alu 1 306 -5 249 400 39 0 chr5 16572962 16573092 -183057058 + L2 LINE L2 3136 3270 -2 300 156 26 91 chr5 16574448 16574525 -183055625 - Tigger5 DNA MER2_type 0 2323 2252 284 222 19 0 chr5 16574496 16574550 -183055600 - Tigger5 DNA MER2_type -2268 55 1 * 3404 192 30 66 chr5 16574604 16575477 -183054673 - L1MD2 LINE L1 -14 6345 5505 195 212 136 45 chr5 16576003 16576069 -183054081 + MIR SINE MIR 80 151 -111 1933 119 78 0 chr5 16577126 16577395 -183052755 - AluSx SINE Alu -22 290 1 210 237 34 51 chr5 16578269 16578328 -183051822 + L3 LINE CR1 445 502 -1075 205 387 6 12 chr5 16580031 16580199 -183049951 + (TATG)n Simple_repeat Simple_repeat 4 170 0 355 331 0 22 chr5 16580213 16580394 -183049756 + (TG)n Simple_repeat Simple_repeat 2 178 0 368 333 6 17 chr5 16580492 16580672 -183049478 + (TG)n Simple_repeat Simple_repeat 1 178 0 419 311 0 22 chr5 16580698 16580881 -183049269 + (TG)n Simple_repeat Simple_repeat 1 179 0 2413 114 11 3 chr5 16581276 16581636 -183048514 - L1PA15 LINE L1 -4 6161 5799 1916 153 0 54 chr5 16582375 16582708 -183047442 - MER1B DNA MER1_type -24 315 1 2058 103 45 7 chr5 16584826 16585118 -183045032 - AluSx SINE Alu -9 303 1 506 310 51 0 chr5 16585121 16585279 -183044871 - MIR SINE MIR -86 176 11 226 294 87 76 chr5 16586974 16587158 -183042992 - MIR SINE MIR -71 191 6 245 298 12 12 chr5 16587432 16587516 -183042634 + MIR3 SINE MIR 92 175 -33 2560 234 69 21 chr5 16587890 16588674 -183041476 + L1ME2 LINE L1 5356 6332 -2 204 150 50 0 chr5 16590058 16590098 -183040052 + CT-rich Low_complexity Low_complexity 5 46 0 21 0 0 0 chr5 16590150 16590171 -183039979 + AT_rich Low_complexity Low_complexity 1 21 0 200 267 6 19 chr5 16591485 16591646 -183038504 + CT-rich Low_complexity Low_complexity 1 159 0 28 29 0 0 chr5 16592772 16592807 -183037343 + AT_rich Low_complexity Low_complexity 1 35 0 2050 122 14 0 chr5 16593391 16593670 -183036480 + AluSq SINE Alu 1 283 -30 2177 121 7 3 chr5 16594557 16594855 -183035295 - AluSx SINE Alu -13 299 1 234 182 0 0 chr5 16595051 16595095 -183035055 - L1MC3 LINE L1 -857 6928 6885 243 254 0 0 chr5 16595119 16595174 -183034976 - L1MB7 LINE L1 -10 6174 6120 401 238 67 72 chr5 16597367 16597590 -183032560 - MLT1J LTR MaLR -193 318 97 922 143 0 43 chr5 16601662 16601823 -183028327 - FRAM SINE Alu -1 175 22 1573 162 96 35 chr5 16602490 16602835 -183027315 + MER47A DNA MER2_type 1 366 0 623 231 130 47 chr5 16603016 16603197 -183026953 - L1MC5 LINE L1 -171 7790 7625 1952 161 0 3 chr5 16603197 16603496 -183026654 - AluJo SINE Alu -14 298 1 623 231 130 47 chr5 16603496 16603760 -183026390 - L1MC5 LINE L1 -336 7625 7308 207 0 0 0 chr5 16603808 16603831 -183026319 + (GA)n Simple_repeat Simple_repeat 1 23 0 854 215 125 81 chr5 16604009 16604418 -183025732 - L1MC5 LINE L1 -728 7233 6807 2014 148 16 47 chr5 16604420 16604806 -183025344 - THE1C LTR MaLR -1 374 1 672 268 0 0 chr5 16604887 16605044 -183025106 + L1MC5 LINE L1 6636 6792 -1169 287 267 38 61 chr5 16605262 16605393 -183024757 + MER58B DNA MER1_type 197 324 -17 252 259 106 41 chr5 16605388 16605617 -183024533 - MLT1F1 LTR MaLR -91 502 188 * 196 175 105 18 chr5 16606484 16606541 -183023609 - MIR SINE MIR -129 133 72 362 269 115 54 chr5 16608049 16608328 -183021822 - L1MC5 LINE L1 -1878 5930 5635 2273 112 0 13 chr5 16608791 16609104 -183021046 - AluSx SINE Alu -3 309 1 2366 116 0 0 chr5 16610103 16610414 -183019736 - AluSq SINE Alu -2 311 1 343 252 0 41 chr5 16611806 16611929 -183018221 + C-rich Low_complexity Low_complexity 3 120 0 1961 62 39 0 chr5 16612177 16612434 -183017716 + L1P3 LINE L1 5538 5804 -350 395 276 74 28 chr5 16613586 16613803 -183016347 - MARNA DNA Mariner -182 404 178 245 241 0 37 chr5 16614322 16614376 -183015774 - FAM SINE Alu -17 158 107 254 174 0 45 chr5 16614420 16614476 -183015674 - Alu SINE Alu -19 283 245 183 42 0 0 chr5 16614497 16614521 -183015629 + (TG)n Simple_repeat Simple_repeat 2 25 0 520 217 38 0 chr5 16614523 16614629 -183015521 - FRAM SINE Alu -30 146 37 678 137 29 79 chr5 16614634 16614773 -183015377 + AluJo SINE Alu 41 172 -140 260 361 17 0 chr5 16615656 16615775 -183014375 + MER5A DNA MER1_type 69 189 0 480 260 96 14 chr5 16616449 16616668 -183013482 + L1MC4 LINE L1 5270 5506 -2302 309 266 82 49 chr5 16616946 16617130 -183013020 + L1MC4 LINE L1 5781 5970 -1838 353 286 122 31 chr5 16617540 16617834 -183012316 - L2 LINE L2 -82 3231 2911 629 177 194 16 chr5 16619766 16619952 -183010198 + MER20 DNA MER1_type 1 219 0 6954 51 15 12 chr5 16623669 16624318 -183005832 + L1PA7 LINE L1 5171 5822 -332 2447 78 3 7 chr5 16624318 16624625 -183005525 + AluY SINE Alu 1 306 -5 6954 51 15 12 chr5 16624625 16624939 -183005211 + L1PA7 LINE L1 5822 6134 -20 215 231 48 115 chr5 16625121 16625225 -183004925 - L2 LINE L2 -12 3260 3164 23 0 0 0 chr5 16626396 16626419 -183003731 + AT_rich Low_complexity Low_complexity 1 23 0 2319 60 0 3 chr5 16627339 16627621 -183002529 + AluY SINE Alu 23 303 -8 26 50 0 0 chr5 16627973 16628013 -183002137 + AT_rich Low_complexity Low_complexity 1 40 0 2375 112 0 0 chr5 16628013 16628325 -183001825 - AluSx SINE Alu 0 312 1 193 261 109 22 chr5 16629030 16629122 -183001028 + L2 LINE L2 3145 3244 -28 373 309 148 27 chr5 16629328 16629694 -183000456 - MLT1J LTR MaLR -15 496 87 339 282 28 7 chr5 16634027 16634169 -182995981 + (TGG)n Simple_repeat Simple_repeat 1 145 0 1090 143 22 22 chr5 16634374 16634556 -182995594 - AluJb SINE Alu -15 297 116 193 373 0 0 chr5 16635362 16635437 -182994713 - L2 LINE L2 -562 2752 2678 21 0 0 0 chr5 16636246 16636267 -182993883 + AT_rich Low_complexity Low_complexity 1 21 0 1842 159 6 25 chr5 16637628 16637942 -182992208 - AluJo SINE Alu -4 308 1 592 261 5 59 chr5 16638396 16638582 -182991568 + L1MC4 LINE L1 6457 6633 -1409 180 0 0 0 chr5 16638582 16638602 -182991548 + (CA)n Simple_repeat Simple_repeat 2 21 0 592 261 5 59 chr5 16638602 16638618 -182991532 + L1MC4 LINE L1 6633 6648 -1394 363 222 94 17 chr5 16639453 16639570 -182990580 - MIR SINE MIR -80 182 57 291 280 200 7 chr5 16640757 16640907 -182989243 - MIR SINE MIR -21 241 63 265 293 28 0 chr5 16642188 16642283 -182987867 - MIR SINE MIR -63 145 76 309 215 77 0 chr5 16643573 16643638 -182986512 + Tigger2 DNA MER2_type 2 71 -2647 245 224 103 0 chr5 16643642 16643700 -182986450 - MER2 DNA MER2_type 0 345 282 * 352 246 0 0 chr5 16643677 16643742 -182986408 - MER8 DNA MER2_type -62 177 113 1586 182 75 3 chr5 16644004 16644339 -182985811 - MLT1A1 LTR MaLR -2 363 5 259 282 0 0 chr5 16644826 16644904 -182985246 + MIR SINE MIR 78 155 -107 25 0 0 0 chr5 16645942 16645967 -182984183 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 16646131 16646153 -182983997 + AT_rich Low_complexity Low_complexity 1 22 0 2351 106 3 0 chr5 16646159 16646471 -182983679 + AluSq SINE Alu 1 313 0 23 0 0 0 chr5 16646675 16646698 -182983452 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr5 16647946 16647969 -182982181 + (TC)n Simple_repeat Simple_repeat 2 24 0 2294 145 51 12 chr5 16647969 16648382 -182981768 + MSTB1 LTR MaLR 2 430 -2 638 260 92 36 chr5 16648624 16648874 -182981276 + MER46C DNA MER2_type 36 299 -39 182 222 185 0 chr5 16648909 16648963 -182981187 - MIR SINE MIR -109 153 90 184 345 0 0 chr5 16650309 16650364 -182979786 + MIR SINE MIR 97 151 -57 2743 107 0 0 chr5 16651572 16651936 -182978214 - THE1B LTR MaLR 0 364 1 21 36 0 0 chr5 16653014 16653042 -182977108 + AT_rich Low_complexity Low_complexity 1 28 0 1291 185 3 83 chr5 16655151 16655476 -182974674 - AluSx SINE Alu -13 299 1 2273 107 0 3 chr5 16655478 16655778 -182974372 - AluSx SINE Alu -13 299 1 1016 105 8 0 chr5 16655780 16655913 -182974237 - AluSq/x SINE Alu -179 134 1 232 250 15 15 chr5 16657198 16657266 -182972884 + (CA)n Simple_repeat Simple_repeat 1 68 0 22 35 0 0 chr5 16657484 16657513 -182972637 + AT_rich Low_complexity Low_complexity 1 29 0 2444 63 0 10 chr5 16658072 16658371 -182971779 + AluSc SINE Alu 1 296 -13 1082 296 54 22 chr5 16658989 16659493 -182970657 + MER20B DNA MER1_type 264 783 0 639 283 91 71 chr5 16659617 16660070 -182970080 + MLT1J LTR MaLR 1 462 -49 2159 116 0 10 chr5 16662637 16662931 -182967219 + AluSx SINE Alu 1 291 -21 319 269 9 19 chr5 16663723 16663831 -182966319 + A-rich Low_complexity Low_complexity 3 109 0 183 273 0 0 chr5 16663864 16663908 -182966242 + L2 LINE L2 3207 3250 -22 588 249 80 24 chr5 16664322 16664535 -182965615 + L1MC4 LINE L1 6463 6687 -1355 349 251 6 12 chr5 16664535 16664698 -182965452 + (TGGG)n Simple_repeat Simple_repeat 2 163 0 820 222 26 6 chr5 16664701 16665019 -182965131 + (TGGA)n Simple_repeat Simple_repeat 1 324 0 601 198 6 16 chr5 16665041 16665223 -182964927 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 697 278 48 39 chr5 16665344 16665789 -182964361 + L1MC4 LINE L1 7386 7808 0 1856 184 36 0 chr5 16666756 16667092 -182963058 - MER7A DNA MER2_type 0 346 1 305 247 236 6 chr5 16667621 16667799 -182962351 + MIR SINE MIR 12 230 -32 250 264 66 28 chr5 16668575 16668681 -182961469 - MER5A DNA MER1_type -57 132 23 292 218 85 128 chr5 16672393 16672581 -182957569 + MER3 DNA MER1_type 30 209 0 22 0 0 0 chr5 16673697 16673719 -182956431 + AT_rich Low_complexity Low_complexity 1 22 0 542 261 113 15 chr5 16675298 16675501 -182954649 - MIR SINE MIR -12 250 28 608 283 143 0 chr5 16678034 16678257 -182951893 - MIR SINE MIR -2 260 6 1402 130 4 48 chr5 16678673 16678903 -182951247 - AluJo SINE Alu -9 303 84 190 312 167 22 chr5 16680047 16680185 -182949965 - MIR3 SINE MIR -34 174 17 2480 74 0 0 chr5 16681063 16681359 -182948791 - AluSx SINE Alu -2 310 15 24 0 0 29 chr5 16683003 16683022 -182947128 + AT_rich Low_complexity Low_complexity 1 20 -14 2167 116 3 7 chr5 16683022 16683314 -182946836 - AluSx SINE Alu -21 291 1 24 0 0 29 chr5 16683314 16683329 -182946821 + AT_rich Low_complexity Low_complexity 20 34 0 1117 187 53 78 chr5 16683337 16683474 -182946676 - AluJo SINE Alu -35 277 149 2227 103 10 0 chr5 16683474 16683774 -182946376 - AluSq SINE Alu -10 303 1 1117 187 53 78 chr5 16683774 16683920 -182946230 - AluJo SINE Alu -163 149 1 2506 61 3 0 chr5 16684200 16684493 -182945657 - AluY SINE Alu -17 294 1 287 232 167 51 chr5 16686662 16686800 -182943350 + Charlie1 DNA MER1_type 1419 1572 -1189 198 0 0 0 chr5 16689094 16689116 -182941034 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 236 307 109 0 chr5 16689343 16689480 -182940670 - MIR SINE MIR -27 235 84 600 213 89 6 chr5 16690111 16690280 -182939870 + L1MC5 LINE L1 7720 7902 -59 1883 135 151 39 chr5 16691345 16691730 -182938420 + MSTA LTR MaLR 1 428 0 208 314 85 8 chr5 16693789 16693907 -182936243 - MIR SINE MIR -36 226 100 189 0 0 0 chr5 16695529 16695550 -182934600 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 397 242 40 16 chr5 16695622 16695746 -182934404 + L2 LINE L2 3114 3240 -73 219 186 0 0 chr5 16696866 16696909 -182933241 + (TA)n Simple_repeat Simple_repeat 2 44 0 226 125 54 0 chr5 16696910 16696966 -182933184 - L1MCa LINE L1 -4362 2064 2006 251 140 20 0 chr5 16696971 16697021 -182933129 + (TA)n Simple_repeat Simple_repeat 1 51 0 253 288 27 18 chr5 16697075 16697186 -182932964 + L1MB7 LINE L1 5786 5897 -1911 2449 240 143 51 chr5 16697724 16699029 -182931121 + L1MC5 LINE L1 6512 7925 -36 713 182 171 9 chr5 16699190 16699398 -182930752 - MLT1A1 LTR MaLR -125 249 1 811 176 149 0 chr5 16699747 16699935 -182930215 + L1MB7 LINE L1 5953 6168 -16 300 239 145 8 chr5 16703203 16703320 -182926830 + L1ME LINE L1 85 217 -5853 476 223 10 114 chr5 16703365 16703558 -182926592 + L1ME LINE L1 438 610 -5460 227 303 53 0 chr5 16706529 16706605 -182923545 + L2 LINE L2 3223 3302 -11 1540 158 19 15 chr5 16706629 16706895 -182923255 + AluSx SINE Alu 41 307 -5 192 135 0 0 chr5 16706896 16706933 -182923217 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 21 82 0 0 chr5 16707493 16707542 -182922608 + AT_rich Low_complexity Low_complexity 1 49 0 21 36 0 0 chr5 16708410 16708438 -182921712 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 16708762 16708797 -182921353 + AT_rich Low_complexity Low_complexity 1 35 0 212 260 0 0 chr5 16709171 16709221 -182920929 + (CATA)n Simple_repeat Simple_repeat 3 52 0 227 306 20 10 chr5 16714863 16714961 -182915189 + MIR SINE MIR 45 143 -119 240 257 56 69 chr5 16716391 16716535 -182913615 - L1ME3 LINE L1 -66 6096 5955 2286 163 60 8 chr5 16716536 16716936 -182913214 + MSTB LTR MaLR 1 421 -5 238 150 0 0 chr5 16717013 16717053 -182913097 - L1ME3 LINE L1 -222 5948 5909 2106 137 38 9 chr5 16717055 16717399 -182912751 + MER46B DNA MER2_type 1 229 -7 399 279 23 35 chr5 16717435 16717607 -182912543 - L1ME3 LINE L1 -305 5865 5696 202 231 0 19 chr5 16722219 16722271 -182907879 + MIR SINE MIR 94 144 -118 487 282 79 0 chr5 16722388 16722590 -182907560 - MIR SINE MIR -10 252 35 337 188 82 0 chr5 16723372 16723457 -182906693 - MER69A DNA AcHobo -54 123 32 442 233 137 9 chr5 16725257 16725476 -182904674 + MLT1H LTR MaLR 73 319 -230 292 301 70 6 chr5 16726015 16726171 -182903979 - MER105 DNA DNA -37 167 2 904 237 68 23 chr5 16726495 16726803 -182903347 + MER33 DNA MER1_type 3 324 0 22 0 0 0 chr5 16727788 16727810 -182902340 + AT_rich Low_complexity Low_complexity 1 22 0 235 200 0 0 chr5 16727942 16727992 -182902158 - L1ME3A LINE L1 -8 6162 6113 1745 145 23 13 chr5 16728090 16728394 -182901756 - AluJb SINE Alu -5 307 1 2202 87 3 3 chr5 16728934 16729234 -182900916 - AluY SINE Alu -11 300 1 1345 229 33 68 chr5 16732352 16732713 -182897437 + MLT2D LTR ERVL 1 373 -41 10092 148 77 92 chr5 16732713 16733027 -182897123 - Tigger1 DNA MER2_type 0 2418 2101 2082 96 7 7 chr5 16733027 16733319 -182896831 - AluY SINE Alu -19 292 1 10092 148 77 92 chr5 16733319 16734090 -182896060 - Tigger1 DNA MER2_type -317 2101 1320 1973 141 0 0 chr5 16734090 16734389 -182895761 - AluSx SINE Alu -13 299 1 10092 148 77 92 chr5 16734389 16735756 -182894394 - Tigger1 DNA MER2_type -1098 1320 1 1345 229 33 68 chr5 16735756 16735821 -182894329 + MLT2D LTR ERVL 373 412 -2 234 0 0 0 chr5 16735883 16735909 -182894241 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1792 101 42 49 chr5 16738723 16739010 -182891140 - AluSg SINE Alu -25 285 1 27 73 0 0 chr5 16741188 16741243 -182888907 + GC_rich Low_complexity Low_complexity 1 55 0 405 205 0 0 chr5 16741392 16741509 -182888641 + (CCG)n Simple_repeat Simple_repeat 3 119 0 2263 87 0 7 chr5 16743007 16743305 -182886845 - AluSp SINE Alu -17 296 1 719 307 24 5 chr5 16743440 16743652 -182886498 + MIR SINE MIR 6 221 -41 2108 177 55 13 chr5 16743954 16744411 -182885739 + L1MB3 LINE L1 5706 6181 -2 27 29 0 0 chr5 16744777 16744811 -182885339 + AT_rich Low_complexity Low_complexity 1 34 0 218 326 57 46 chr5 16745674 16745849 -182884301 + L2 LINE L2 3098 3274 -39 262 84 42 141 chr5 16746702 16746773 -182883377 + MER5A DNA MER1_type 1 64 -125 222 91 0 0 chr5 16747214 16747247 -182882903 + (A)n Simple_repeat Simple_repeat 1 33 0 773 142 0 0 chr5 16747831 16747944 -182882206 - FLAM_A SINE Alu -9 133 21 997 176 0 6 chr5 16748027 16748197 -182881953 - FAM SINE Alu -4 171 3 29 28 0 0 chr5 16749322 16749358 -182880792 + AT_rich Low_complexity Low_complexity 1 36 0 1440 182 13 48 chr5 16750025 16750338 -182879812 - AluJo SINE Alu -10 302 1 4690 210 96 9 chr5 16750499 16751654 -182878496 + Charlie1a DNA MER1_type 1 1255 -200 2172 112 6 6 chr5 16752187 16752499 -182877651 - AluSx SINE Alu 0 312 1 23 33 0 0 chr5 16753080 16753110 -182877040 + AT_rich Low_complexity Low_complexity 1 30 0 1695 158 3 38 chr5 16754035 16754351 -182875799 + AluJo SINE Alu 1 305 -7 316 255 32 21 chr5 16754436 16754530 -182875620 - MIR SINE MIR -18 244 150 28 48 0 0 chr5 16756069 16756111 -182874039 + AT_rich Low_complexity Low_complexity 1 42 0 435 268 27 0 chr5 16756966 16757078 -182873072 - L2 LINE L2 -2 3270 3156 358 305 74 47 chr5 16759542 16759732 -182870418 - L1 LINE L1 -2696 3450 3256 246 250 107 6 chr5 16759755 16759923 -182870227 - L1 LINE L1 -2933 3213 3029 1792 140 17 3 chr5 16761190 16761483 -182868667 - AluJo SINE Alu -15 297 1 21 0 0 0 chr5 16761888 16761909 -182868241 + AT_rich Low_complexity Low_complexity 1 21 0 801 196 82 26 chr5 16761913 16762107 -182868043 + MIR SINE MIR 57 261 -1 241 273 11 34 chr5 16762113 16762201 -182867949 + L1MC/D LINE L1 5783 5868 -1940 1615 209 191 9 chr5 16762809 16763253 -182866897 + MER77 LTR ERV1 77 601 -4 2346 84 0 3 chr5 16768801 16769112 -182861038 + AluY SINE Alu 1 310 -1 1092 147 11 0 chr5 16769259 16769436 -182860714 - AluSg/x SINE Alu -10 302 124 206 306 14 56 chr5 16770165 16770237 -182859913 - L2 LINE L2 -42 3230 3162 367 280 40 0 chr5 16770642 16770742 -182859408 + L2 LINE L2 3194 3297 -16 24 0 0 0 chr5 16771617 16771641 -182858509 + GC_rich Low_complexity Low_complexity 1 24 0 6633 122 144 125 chr5 16772590 16774267 -182855883 + pTR5 LTR ERV1 375 2438 0 267 296 31 31 chr5 16774316 16774414 -182855736 + L2 LINE L2 3173 3270 -2 1996 118 17 0 chr5 16774786 16775074 -182855076 + AluSx SINE Alu 1 293 -19 201 191 24 0 chr5 16775931 16775973 -182854177 + A-rich Low_complexity Low_complexity 4 46 0 248 311 47 0 chr5 16776355 16776461 -182853689 + L2 LINE L2 3189 3299 -14 251 295 21 0 chr5 16776505 16776600 -182853550 + MIR SINE MIR 46 142 -120 207 0 0 0 chr5 16780877 16780900 -182849250 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 27 0 0 0 chr5 16781555 16781582 -182848568 + AT_rich Low_complexity Low_complexity 1 27 0 2094 122 10 7 chr5 16781762 16782066 -182848084 - AluSx SINE Alu -7 305 1 207 69 0 0 chr5 16782850 16782879 -182847271 + (GGGA)n Simple_repeat Simple_repeat 3 31 0 207 200 33 33 chr5 16784433 16784493 -182845657 - MIR SINE MIR -126 136 77 309 300 11 0 chr5 16786107 16786197 -182843953 - MIR SINE MIR -107 155 65 192 238 139 30 chr5 16786279 16786380 -182843770 - L3 LINE CR1 -42 1535 1424 2223 123 20 0 chr5 16789700 16790001 -182840149 + AluSg SINE Alu 1 307 -3 1532 190 104 20 chr5 16791193 16791540 -182838610 + MLT1B LTR MaLR 3 378 -12 694 202 87 149 chr5 16791579 16791994 -182838156 + L1MC4a LINE L1 6194 6582 -1226 4204 80 25 6 chr5 16792021 16792571 -182837579 + THE1B-int LTR MaLR 1020 1580 0 2118 114 93 32 chr5 16792571 16792914 -182837236 + THE1B LTR MaLR 1 364 0 3788 226 92 29 chr5 16793003 16793598 -182836552 + L1MC4a LINE L1 6631 7187 -621 1676 164 80 22 chr5 16793598 16793922 -182836228 + MER61A LTR ERV1 1 343 0 3788 226 92 29 chr5 16793922 16794201 -182835949 + L1MC4a LINE L1 7187 7447 -361 516 118 53 0 chr5 16794201 16794277 -182835873 - MADE1 DNA Mariner 0 80 1 3788 226 92 29 chr5 16794277 16794504 -182835646 + L1MC4a LINE L1 7447 7803 -5 21 0 0 0 chr5 16794506 16794527 -182835623 + AT_rich Low_complexity Low_complexity 1 21 0 311 281 53 18 chr5 16796537 16796651 -182833499 + MIR3 SINE MIR 14 131 -77 219 281 209 13 chr5 16796687 16796840 -182833310 + MIR SINE MIR 2 184 -78 1838 181 65 11 chr5 16796947 16797317 -182832833 + MLT1B LTR MaLR 1 390 0 2003 125 17 0 chr5 16798000 16798332 -182831818 + AluSx SINE Alu 1 337 0 21 0 0 0 chr5 16798773 16798794 -182831356 + AT_rich Low_complexity Low_complexity 1 21 0 2280 90 3 3 chr5 16801243 16801532 -182828618 + AluSp SINE Alu 19 307 -6 5617 147 16 20 chr5 16801605 16802618 -182827532 - L1PB4 LINE L1 0 6156 5150 2299 118 0 0 chr5 16802618 16802923 -182827227 - AluSq SINE Alu -8 305 1 5617 147 16 20 chr5 16802923 16803323 -182826827 - L1PB4 LINE L1 -1006 5150 4750 2025 139 20 73 chr5 16804078 16804133 -182826017 - THE1C LTR MaLR 0 375 319 2225 54 58 4 chr5 16804133 16804453 -182825697 - AluY SINE Alu 0 311 1 1620 104 5 0 chr5 16804456 16804668 -182825482 - AluSp SINE Alu -17 296 84 2025 139 20 73 chr5 16804668 16805004 -182825146 - THE1C LTR MaLR -58 317 1 3739 117 9 0 chr5 16805014 16805542 -182824608 + LTR39 LTR ERV1 1 533 -250 666 135 85 35 chr5 16805655 16805796 -182824354 - MLT1C LTR MaLR -314 153 6 339 319 110 11 chr5 16805810 16806073 -182824077 + L1ME4a LINE L1 5830 6118 -3 1934 164 6 6 chr5 16806119 16806430 -182823720 + AluJo SINE Alu 1 311 -1 2052 125 16 29 chr5 16806660 16806971 -182823179 - AluJb SINE Alu -5 307 1 2316 100 3 0 chr5 16807082 16807372 -182822778 - AluSc SINE Alu -18 291 1 279 221 0 71 chr5 16807738 16807851 -182822299 + L1MA7 LINE L1 6164 6268 -23 270 0 0 0 chr5 16808296 16808326 -182821824 + (TC)n Simple_repeat Simple_repeat 1 30 0 306 332 0 27 chr5 16808750 16808937 -182821213 + L1MC5 LINE L1 7730 7911 -50 1993 106 4 7 chr5 16809479 16809752 -182820398 + AluSx SINE Alu 2 273 -39 600 264 197 23 chr5 16810118 16810690 -182819460 - L2 LINE L2 -75 3238 2579 1622 169 36 7 chr5 16811502 16811781 -182818369 - AluJb SINE Alu -25 287 1 549 243 93 9 chr5 16812173 16812373 -182817777 - L2 LINE L2 -1364 1950 1729 180 0 0 0 chr5 16812373 16812393 -182817757 + (GGGTG)n Simple_repeat Simple_repeat 5 24 0 549 243 93 9 chr5 16812393 16812406 -182817744 - L2 LINE L2 -1585 1729 1719 214 293 13 27 chr5 16812630 16812705 -182817445 - MER5B DNA MER1_type -88 90 17 844 104 30 37 chr5 16812789 16812923 -182817227 - AluSq/x SINE Alu -179 133 1 2375 86 3 0 chr5 16813073 16813364 -182816786 + AluSc SINE Alu 1 292 -17 1252 213 46 46 chr5 16813375 16813764 -182816386 + LTR37A LTR ERV1 38 426 0 2291 108 0 0 chr5 16814020 16814326 -182815824 + AluSx SINE Alu 1 306 -6 832 259 72 53 chr5 16814344 16814607 -182815543 - MLT1J LTR MaLR -136 375 108 2472 81 3 0 chr5 16815209 16815519 -182814631 - AluSp SINE Alu -2 311 1 1028 243 186 22 chr5 16816041 16816622 -182813528 - L2 LINE L2 0 3313 2635 241 325 105 10 chr5 16816871 16817071 -182813079 + L2 LINE L2 2931 3149 -164 585 307 76 4 chr5 16817746 16817971 -182812179 - MIR SINE MIR -5 257 17 633 243 38 34 chr5 16818604 16818625 -182811525 - MER20B DNA MER1_type -36 747 728 2190 87 24 0 chr5 16818625 16818913 -182811237 + AluSx SINE Alu 1 295 -17 633 243 38 34 chr5 16818913 16819130 -182811020 - MER20B DNA MER1_type -55 728 508 380 127 42 119 chr5 16819363 16819481 -182810669 + MER31-int LTR ERV1 707 815 -6722 2280 115 0 7 chr5 16819541 16819846 -182810304 + AluSc SINE Alu 1 303 -6 483 177 53 25 chr5 16819915 16820049 -182810101 + MER31-int LTR ERV1 858 2644 -3687 325 222 0 0 chr5 16820049 16820109 -182810041 + MER31A LTR ERV1 26 85 -400 1749 192 26 0 chr5 16820109 16820491 -182809659 - MER54A LTR ERVL 0 793 1 268 191 0 0 chr5 16820510 16820552 -182809598 + MER31-int LTR ERV1 772 813 -4123 2341 86 0 0 chr5 16820645 16820948 -182809202 + AluY SINE Alu 1 303 -8 2068 162 71 27 chr5 16821001 16821408 -182808742 - MER61B LTR ERV1 0 425 1 275 87 0 0 chr5 16821449 16821495 -182808655 - AluSc SINE Alu 0 299 254 1808 60 60 4 chr5 16821600 16821832 -182808318 - AluY SINE Alu -66 245 1 288 226 16 0 chr5 16822002 16822064 -182808086 + MIR SINE MIR 89 151 -111 392 228 24 82 chr5 16822336 16822430 -182807720 + MER87 LTR ERV1 311 409 -147 2444 74 10 0 chr5 16822430 16822726 -182807424 + AluSp SINE Alu 1 299 -14 392 228 24 82 chr5 16822726 16822763 -182807387 + MER87 LTR ERV1 409 447 -109 2303 98 0 0 chr5 16822763 16823105 -182807045 + AluSx SINE Alu 1 342 0 392 228 24 82 chr5 16823105 16823199 -182806951 + MER87 LTR ERV1 447 516 -40 1226 124 0 0 chr5 16823251 16823428 -182806722 - AluSg/x SINE Alu -4 306 130 335 236 50 87 chr5 16823428 16823589 -182806561 + MER20B DNA MER1_type 57 211 -572 2217 116 7 3 chr5 16823880 16824181 -182805969 - AluSp SINE Alu -11 302 1 2309 102 0 10 chr5 16824410 16824723 -182805427 - AluSq SINE Alu -1 312 3 2379 120 7 62 chr5 16824818 16825234 -182804916 - MER57A LTR ERV1 -10 393 1 277 326 62 16 chr5 16826321 16826450 -182803700 - MLT1I LTR MaLR -175 234 100 1666 124 65 46 chr5 16827067 16827373 -182802777 + AluJo SINE Alu 1 312 0 871 280 8 15 chr5 16827382 16827643 -182802507 - MIR SINE MIR 0 262 4 3106 124 11 2 chr5 16827912 16828364 -182801786 - MER1A DNA MER1_type -73 456 1 319 348 49 57 chr5 16830525 16830769 -182799381 - L2 LINE L2 -1 3271 3030 653 218 78 5 chr5 16830885 16831078 -182799072 + L1M4 LINE L1 4969 5175 -971 975 172 15 15 chr5 16831186 16831384 -182798766 - AluSc SINE Alu -111 198 1 321 193 35 0 chr5 16831409 16831466 -182798684 - L1MC4 LINE L1 -1338 6704 6646 316 290 47 75 chr5 16832583 16832797 -182797353 - MIR SINE MIR -10 252 45 21 36 0 0 chr5 16833206 16833234 -182796916 + AT_rich Low_complexity Low_complexity 1 28 0 232 363 75 7 chr5 16833675 16833821 -182796329 - MIR SINE MIR -75 187 32 183 214 95 0 chr5 16834569 16834611 -182795539 + MIR SINE MIR 122 167 -95 358 173 53 40 chr5 16835742 16835817 -182794333 - L2 LINE L2 -39 3274 3199 470 179 257 14 chr5 16835983 16836123 -182794027 - MER5A DNA MER1_type -6 183 10 426 314 57 48 chr5 16836588 16836817 -182793333 - MIR SINE MIR -12 250 20 2334 70 0 3 chr5 16837732 16838030 -182792120 - AluSp SINE Alu -16 297 1 1502 152 81 60 chr5 16838604 16838876 -182791274 + MER2 DNA MER2_type 3 285 -59 2284 41 41 7 chr5 16838876 16839170 -182790980 + AluY SINE Alu 1 304 -7 1502 152 81 60 chr5 16839170 16839232 -182790918 + MER2 DNA MER2_type 285 344 0 38 0 0 0 chr5 16839647 16839685 -182790465 + AT_rich Low_complexity Low_complexity 1 38 0 1785 137 20 10 chr5 16839685 16839985 -182790165 - AluSx SINE Alu -9 303 1 358 287 23 0 chr5 16840038 16840125 -182790025 + MIR SINE MIR 44 132 -76 397 272 34 20 chr5 16840940 16841087 -182789063 + L2 LINE L2 3165 3313 0 2109 101 3 3 chr5 16841127 16841425 -182788725 - AluSx SINE Alu -14 298 1 418 257 51 8 chr5 16841530 16841663 -182788487 + MIR SINE MIR 4 142 -66 3582 135 20 58 chr5 16841931 16842417 -182787733 - L1MB3 LINE L1 -2 6181 5725 2036 118 0 0 chr5 16842417 16842704 -182787446 + AluSq SINE Alu 1 287 -26 3582 135 20 58 chr5 16842704 16842877 -182787273 - L1MB3 LINE L1 -458 5725 5547 556 295 29 17 chr5 16843347 16843520 -182786630 + MIR SINE MIR 71 245 -17 2186 109 0 0 chr5 16843574 16843877 -182786273 + AluY SINE Alu 1 303 -8 506 271 59 56 chr5 16843880 16844186 -182785964 + L1MC4a LINE L1 5600 5906 -1902 1411 156 52 42 chr5 16844364 16844672 -182785478 - AluJo SINE Alu -1 311 1 595 240 65 0 chr5 16845093 16845247 -182784903 + MIR SINE MIR 29 192 -70 492 311 36 6 chr5 16845452 16845619 -182784531 - MER5B DNA MER1_type 0 178 7 2785 50 3 0 chr5 16846549 16846890 -182783260 + L1PA6 LINE L1 5812 6153 -1 526 293 66 0 chr5 16846920 16847087 -182783063 - MIR SINE MIR -31 231 54 185 279 50 71 chr5 16847096 16847236 -182782914 + L2 LINE L2 2725 2861 -453 436 221 154 5 chr5 16848107 16848302 -182781848 - L1ME4a LINE L1 -4 6117 5894 416 238 0 55 chr5 16848629 16848793 -182781357 - LTR23-int LTR ERV1 -3250 1873 1719 1065 186 0 19 chr5 16848892 16849102 -182781048 - AluJ SINE Alu -1 311 106 1885 217 156 25 chr5 16849102 16849742 -182780408 - MER50 LTR ERV1 -1 733 10 674 180 9 0 chr5 16849745 16849856 -182780294 - AluJ SINE Alu -199 113 2 560 184 74 134 chr5 16849920 16850020 -182780130 - LTR23-int LTR ERV1 -3448 1629 1525 2260 93 3 3 chr5 16850020 16850333 -182779817 - AluSq SINE Alu 0 313 1 560 184 74 134 chr5 16850333 16850540 -182779610 - LTR23-int LTR ERV1 -3552 1525 1307 3697 131 22 90 chr5 16850540 16851282 -182778868 + LTR8 LTR ERV1 1 691 0 560 184 74 134 chr5 16851282 16851315 -182778835 - LTR23-int LTR ERV1 -3770 1307 1274 1953 90 3 47 chr5 16851315 16851666 -182778484 + AluSc SINE Alu 1 309 0 560 184 74 134 chr5 16851666 16851794 -182778356 - LTR23-int LTR ERV1 -3803 1274 1095 1476 134 55 8 chr5 16851812 16852066 -182778084 - AluJb SINE Alu -25 287 22 235 103 26 0 chr5 16852172 16852211 -182777939 - THE1A LTR MaLR -315 40 1 225 303 22 22 chr5 16852285 16852374 -182777776 - L2 LINE L2 0 3313 3225 277 366 23 7 chr5 16852955 16853139 -182777011 + MIR SINE MIR 20 201 -61 678 329 35 24 chr5 16853235 16853490 -182776660 - MIR SINE MIR -3 259 2 282 279 220 56 chr5 16853644 16853907 -182776243 - L2 LINE L2 -379 2935 2602 904 119 4 187 chr5 16853907 16854142 -182776008 + 7SK RNA RNA 1 192 -1 282 279 220 56 chr5 16854142 16854219 -182775931 - L2 LINE L2 -712 2602 2539 330 300 82 29 chr5 16854351 16854521 -182775629 + MIR SINE MIR 10 188 -74 585 281 70 66 chr5 16854571 16854773 -182775377 - MIR SINE MIR -13 249 44 1989 88 30 14 chr5 16854773 16855070 -182775080 + AluY SINE Alu 1 302 -9 585 281 70 66 chr5 16855070 16855109 -182775041 - MIR SINE MIR -218 44 7 610 272 169 54 chr5 16855109 16855517 -182774633 - MLT1L LTR MaLR -3 612 158 255 236 73 0 chr5 16855572 16855627 -182774523 + MLT1H1 LTR MaLR 72 130 -425 349 256 101 79 chr5 16855820 16856047 -182774103 + L2 LINE L2 3075 3306 -7 385 265 66 22 chr5 16856284 16856420 -182773730 - MIR SINE MIR -32 230 89 211 256 0 0 chr5 16856532 16856571 -182773579 - L3 LINE CR1 -107 1470 1432 180 227 0 23 chr5 16857355 16857399 -182772751 + MIR SINE MIR 164 206 -56 234 275 123 118 chr5 16857598 16857809 -182772341 - L2 LINE L2 -6 3266 3055 2470 181 9 5 chr5 16857883 16858315 -182771835 - Tigger2a DNA MER2_type 0 434 1 242 303 57 16 chr5 16858818 16858940 -182771210 + LTR24 LTR ERV1 198 324 -143 2054 127 0 10 chr5 16859071 16859379 -182770771 + AluSx SINE Alu 1 305 -7 240 217 17 0 chr5 16860324 16860384 -182769766 + L1MC5 LINE L1 7179 7239 -722 739 238 45 49 chr5 16860410 16860675 -182769475 + L1MC5 LINE L1 7299 7562 -399 688 188 4 90 chr5 16860684 16860939 -182769211 + MER106A DNA MER1_type 1 233 -3 523 152 76 23 chr5 16861021 16861153 -182768997 + L1MC5 LINE L1 7609 7747 -214 568 257 61 0 chr5 16861299 16861447 -182768703 + Charlie8 DNA MER1_type 5 161 -2256 2880 198 23 61 chr5 16861582 16862284 -182767866 - LTR8 LTR ERV1 -16 675 1 1846 115 0 35 chr5 16862346 16862660 -182767490 + AluSq SINE Alu 1 303 -10 579 298 111 5 chr5 16862669 16862877 -182767273 - MIR SINE MIR -8 254 25 23 54 0 0 chr5 16863096 16863133 -182767017 + AT_rich Low_complexity Low_complexity 1 37 0 2477 201 26 78 chr5 16863147 16863520 -182766630 - MER97b DNA MER1_type? -367 686 362 1995 139 3 0 chr5 16863520 16863815 -182766335 + AluSx SINE Alu 1 296 -16 2477 201 26 78 chr5 16863815 16864123 -182766027 - MER97b DNA MER1_type? -691 362 40 298 177 292 44 chr5 16864272 16864385 -182765765 + MIR3 SINE MIR 6 146 -62 686 210 145 47 chr5 16864525 16864739 -182765411 - MIR SINE MIR 0 262 28 355 269 37 30 chr5 16865150 16865284 -182764866 - MIR SINE MIR -115 147 13 230 162 176 27 chr5 16866557 16866631 -182763519 + MLT1I LTR MaLR 281 365 -44 548 243 14 0 chr5 16866679 16866819 -182763331 - L3 LINE CR1 -42 1535 1394 415 278 11 28 chr5 16867052 16867232 -182762918 + (TGG)n Simple_repeat Simple_repeat 3 179 0 215 302 75 9 chr5 16868288 16868394 -182761756 + MIR SINE MIR 79 191 -71 377 376 18 0 chr5 16869318 16869483 -182760667 + MIR SINE MIR 86 253 -9 1392 254 13 11 chr5 16870185 16870572 -182759578 + MER54A LTR ERVL 472 896 -5 28 48 0 0 chr5 16871658 16871700 -182758450 + AT_rich Low_complexity Low_complexity 1 42 0 190 335 98 69 chr5 16871768 16871941 -182758209 + L3 LINE CR1 35 212 -1365 2353 64 0 3 chr5 16872606 16872904 -182757246 + AluY SINE Alu 8 304 -7 1398 197 10 27 chr5 16874656 16874955 -182755195 - AluJo SINE Alu -18 294 1 2204 119 0 0 chr5 16875022 16875334 -182754816 - AluSx SINE Alu 0 312 1 478 242 22 24 chr5 16875879 16876071 -182754079 + MIR SINE MIR 19 252 -10 335 297 27 18 chr5 16876442 16876553 -182753597 - L2 LINE L2 -1 3312 3201 293 156 0 47 chr5 16877657 16877721 -182752429 - L1MB2 LINE L1 0 6171 6111 211 258 48 32 chr5 16880877 16880939 -182749211 - L2 LINE L2 -5 3267 3205 477 0 0 0 chr5 16884274 16884327 -182745823 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 2061 114 3 3 chr5 16884363 16884662 -182745488 + AluSx SINE Alu 1 299 -13 712 177 0 16 chr5 16885885 16886009 -182744141 + FLAM_A SINE Alu 1 122 -11 207 0 0 0 chr5 16886966 16886989 -182743161 + (T)n Simple_repeat Simple_repeat 1 23 0 603 170 0 0 chr5 16887007 16887113 -182743037 + FRAM SINE Alu 70 175 -1 2730 173 44 23 chr5 16888099 16888639 -182741511 - L1MB3 LINE L1 -12 6171 5617 1976 181 34 0 chr5 16888639 16888992 -182741158 + MLT1A1 LTR MaLR 1 365 0 2730 173 44 23 chr5 16888992 16889022 -182741128 - L1MB3 LINE L1 -566 5617 5589 254 304 59 20 chr5 16889146 16889248 -182740902 + L2 LINE L2 2701 2806 -508 213 286 0 0 chr5 16889254 16889303 -182740847 + (CA)n Simple_repeat Simple_repeat 1 49 0 180 0 0 0 chr5 16893256 16893276 -182736874 + (A)n Simple_repeat Simple_repeat 1 20 0 1932 125 14 0 chr5 16893719 16894062 -182736088 - AluSx SINE Alu 0 347 1 1862 178 65 11 chr5 16894745 16895115 -182735035 - MLT1B LTR MaLR 0 390 1 296 291 187 25 chr5 16895173 16895376 -182734774 - MIR SINE MIR -25 237 2 362 272 53 18 chr5 16895412 16895526 -182734624 - MIR3 SINE MIR -77 131 14 21 0 0 0 chr5 16897535 16897556 -182732594 + AT_rich Low_complexity Low_complexity 1 21 0 3806 226 92 29 chr5 16897558 16897785 -182732365 - L1MC4a LINE L1 -5 7803 7592 512 118 53 0 chr5 16897785 16897861 -182732289 + MADE1 DNA Mariner 1 80 0 3806 226 92 29 chr5 16897861 16898140 -182732010 - L1MC4a LINE L1 -216 7592 7332 1684 167 80 22 chr5 16898140 16898464 -182731686 - MER61A LTR ERV1 0 343 1 3806 226 92 29 chr5 16898464 16899059 -182731091 - L1MC4a LINE L1 -476 7332 6631 2123 114 93 32 chr5 16899148 16899491 -182730659 - THE1B LTR MaLR 0 364 1 4222 80 25 6 chr5 16899491 16900041 -182730109 - THE1B-int LTR MaLR 0 1580 1020 659 207 80 142 chr5 16900068 16900483 -182729667 - L1MC4a LINE L1 -1226 6582 6194 1546 192 103 26 chr5 16900522 16900871 -182729279 - MLT1B LTR MaLR -12 378 3 2112 120 20 0 chr5 16902063 16902364 -182727786 - AluSg SINE Alu -3 307 1 234 238 139 30 chr5 16905684 16905785 -182724365 + L3 LINE CR1 1424 1535 -42 344 300 11 0 chr5 16905867 16905957 -182724193 + MIR SINE MIR 65 155 -107 263 216 160 48 chr5 16907513 16907638 -182722512 + MIR SINE MIR 2 140 -122 207 69 0 0 chr5 16909186 16909215 -182720935 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 1971 122 10 7 chr5 16909999 16910303 -182719847 + AluSx SINE Alu 1 305 -7 27 0 0 0 chr5 16910483 16910510 -182719640 + AT_rich Low_complexity Low_complexity 1 27 0 207 0 0 0 chr5 16911165 16911188 -182718962 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 293 295 21 0 chr5 16915465 16915560 -182714590 - MIR SINE MIR -120 142 46 294 311 47 0 chr5 16915604 16915710 -182714440 - L2 LINE L2 -14 3299 3189 201 191 24 0 chr5 16916092 16916134 -182714016 + T-rich Low_complexity Low_complexity 4 46 0 1996 118 17 0 chr5 16916991 16917279 -182712871 - AluSx SINE Alu -19 293 1 267 296 31 31 chr5 16917651 16917749 -182712401 - L2 LINE L2 -2 3270 3173 6649 122 144 125 chr5 16917798 16919475 -182710675 - pTR5 LTR ERV1 0 2438 375 28 0 0 0 chr5 16920424 16920452 -182709698 + GC_rich Low_complexity Low_complexity 1 28 0 367 280 40 0 chr5 16921325 16921425 -182708725 - L2 LINE L2 -16 3297 3194 206 306 14 56 chr5 16921830 16921902 -182708248 + L2 LINE L2 3162 3230 -42 1092 147 11 0 chr5 16922631 16922808 -182707342 + AluSg/x SINE Alu 124 302 -10 2313 87 0 3 chr5 16922955 16923266 -182706884 - AluY SINE Alu -1 310 1 1615 209 191 9 chr5 16928814 16929258 -182700892 - MER77 LTR ERV1 -4 601 77 241 273 11 34 chr5 16929866 16929954 -182700196 - L1MC/D LINE L1 -1940 5868 5783 801 196 82 26 chr5 16929960 16930154 -182699996 - MIR SINE MIR -1 261 57 21 0 0 0 chr5 16930158 16930179 -182699971 + AT_rich Low_complexity Low_complexity 1 21 0 1792 140 17 3 chr5 16930584 16930877 -182699273 + AluJo SINE Alu 1 297 -15 246 250 107 6 chr5 16932140 16932308 -182697842 + L1 LINE L1 3029 3213 -2933 358 305 74 47 chr5 16932331 16932521 -182697629 + L1 LINE L1 3256 3450 -2696 439 261 27 0 chr5 16934982 16935093 -182695057 + L2 LINE L2 3157 3270 -2 28 48 0 0 chr5 16935950 16935992 -182694158 + AT_rich Low_complexity Low_complexity 1 42 0 316 255 32 21 chr5 16937530 16937624 -182692526 + MIR SINE MIR 150 244 -18 1695 158 3 38 chr5 16937709 16938025 -182692125 - AluJo SINE Alu -7 305 1 23 33 0 0 chr5 16938949 16938979 -182691171 + AT_rich Low_complexity Low_complexity 1 30 0 2172 112 6 6 chr5 16939560 16939872 -182690278 + AluSx SINE Alu 1 312 0 4706 209 96 9 chr5 16940405 16941560 -182688590 - Charlie1a DNA MER1_type -200 1255 1 1471 176 13 48 chr5 16941721 16942034 -182688116 + AluJo SINE Alu 1 302 -10 29 28 0 0 chr5 16942701 16942737 -182687413 + AT_rich Low_complexity Low_complexity 1 36 0 997 176 0 6 chr5 16943862 16944032 -182686118 + FAM SINE Alu 3 171 -4 773 142 0 0 chr5 16944115 16944228 -182685922 + FLAM_A SINE Alu 21 133 -9 222 91 0 0 chr5 16944812 16944845 -182685305 + (T)n Simple_repeat Simple_repeat 1 33 0 262 84 42 141 chr5 16945286 16945357 -182684793 - MER5A DNA MER1_type -125 64 1 218 326 57 46 chr5 16946210 16946385 -182683765 - L2 LINE L2 -39 3274 3098 27 29 0 0 chr5 16947248 16947282 -182682868 + AT_rich Low_complexity Low_complexity 1 34 0 2108 177 55 13 chr5 16947648 16948105 -182682045 - L1MB3 LINE L1 -2 6181 5706 719 307 24 5 chr5 16948407 16948619 -182681531 - MIR SINE MIR -41 221 6 2263 87 0 7 chr5 16948754 16949052 -182681098 + AluSp SINE Alu 1 296 -17 405 205 0 0 chr5 16950550 16950667 -182679483 + (CGG)n Simple_repeat Simple_repeat 3 119 0 27 73 0 0 chr5 16950816 16950871 -182679279 + GC_rich Low_complexity Low_complexity 1 55 0 1792 101 42 49 chr5 16953047 16953334 -182676816 + AluSg SINE Alu 1 285 -25 234 0 0 0 chr5 16956149 16956175 -182673975 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1345 229 33 68 chr5 16956237 16956302 -182673848 - MLT2D LTR ERVL -2 412 346 10174 148 78 91 chr5 16956302 16957667 -182672483 + Tigger1 DNA MER2_type 1 1383 -1035 1959 144 0 0 chr5 16957667 16957966 -182672184 + AluSx SINE Alu 1 299 -13 10174 148 78 91 chr5 16957966 16958737 -182671413 + Tigger1 DNA MER2_type 1383 2101 -317 2082 96 7 7 chr5 16958737 16959029 -182671121 + AluY SINE Alu 1 292 -19 10174 148 78 91 chr5 16959029 16959343 -182670807 + Tigger1 DNA MER2_type 2101 2418 0 1345 229 33 68 chr5 16959343 16959704 -182670446 - MLT2D LTR ERVL -68 346 1 2202 87 3 3 chr5 16962820 16963120 -182667030 + AluY SINE Alu 1 300 -11 1745 145 23 13 chr5 16963660 16963964 -182666186 + AluJb SINE Alu 1 307 -5 235 200 0 0 chr5 16964062 16964112 -182666038 + L1ME3A LINE L1 6113 6162 -8 22 0 0 0 chr5 16964244 16964266 -182665884 + AT_rich Low_complexity Low_complexity 1 22 0 904 237 68 23 chr5 16965251 16965559 -182664591 - MER33 DNA MER1_type 0 324 3 292 301 70 6 chr5 16965883 16966039 -182664111 + MER105 DNA DNA 2 167 -37 442 233 137 9 chr5 16966578 16966797 -182663353 - MLT1H LTR MaLR -230 319 73 346 188 82 0 chr5 16968597 16968682 -182661468 + MER69A DNA AcHobo 32 123 -54 579 282 79 0 chr5 16969464 16969666 -182660484 + MIR SINE MIR 35 252 -10 225 231 0 19 chr5 16969783 16969835 -182660315 - MIR SINE MIR -118 144 94 454 221 60 20 chr5 16974441 16974590 -182655560 - L1M4 LINE L1 -1383 4763 4609 477 0 0 0 chr5 16974676 16974729 -182655421 + (TC)n Simple_repeat Simple_repeat 2 54 0 477 0 0 0 chr5 16974728 16974781 -182655369 + (TA)n Simple_repeat Simple_repeat 2 54 0 2096 70 11 21 chr5 16974781 16975068 -182655082 - AluY SINE Alu -27 284 1 619 223 74 75 chr5 16975075 16975325 -182654825 - L1ME3 LINE L1 -19 6147 5894 * 4412 205 54 24 chr5 16975320 16975395 -182654755 - L1MD1 LINE L1 0 6636 6565 2277 101 0 3 chr5 16975395 16975703 -182654447 + AluSp SINE Alu 1 307 -6 4412 205 54 24 chr5 16975703 16976271 -182653879 - L1MD1 LINE L1 -71 6565 6016 1786 103 10 164 chr5 16976271 16976667 -182653483 - MER1B DNA MER1_type -2 335 1 4412 205 54 24 chr5 16976667 16977338 -182652812 - L1MD1 LINE L1 -620 6016 5367 2138 108 0 0 chr5 16977338 16977635 -182652515 + AluY SINE Alu 1 297 -14 4412 205 54 24 chr5 16977635 16978263 -182651887 - L1MD1 LINE L1 -1269 5367 4628 2126 105 6 10 chr5 16978279 16978592 -182651558 - AluSx SINE Alu 0 312 1 497 182 23 0 chr5 16978627 16978715 -182651435 + Tigger5 DNA MER2_type 2234 2323 0 1530 171 51 9 chr5 16978715 16979031 -182651119 - L1MD1 LINE L1 -4332 2208 1880 437 266 42 91 chr5 16979036 16979277 -182650873 - MER34 LTR ERV1 0 542 314 1108 212 17 9 chr5 16979297 16979528 -182650622 + AluJo SINE Alu 1 233 -79 480 163 12 0 chr5 16979528 16979608 -182650542 - AluS SINE Alu -229 83 3 450 122 14 0 chr5 16979610 16979684 -182650466 - AluS SINE Alu -7 303 229 532 145 0 0 chr5 16979685 16979761 -182650389 + AluJo SINE Alu 217 292 -20 2423 224 43 8 chr5 16980021 16980571 -182649579 - L1MD1 LINE L1 -5638 902 18 5804 109 9 56 chr5 16981538 16982230 -182647920 - L1PA14 LINE L1 -3 6158 5557 2444 87 0 0 chr5 16982230 16982529 -182647621 - AluSx SINE Alu -11 301 3 5804 109 9 56 chr5 16982529 16983260 -182646890 - L1PA14 LINE L1 -604 5557 4793 2384 98 7 0 chr5 16983640 16983947 -182646203 + AluSx SINE Alu 1 309 -3 1124 251 98 24 chr5 16984117 16984567 -182645583 - MLT1D LTR MaLR 0 505 23 293 282 39 0 chr5 16985295 16985373 -182644777 + L2 LINE L2 3136 3216 -56 2300 106 0 0 chr5 16985434 16985735 -182644415 - AluSx SINE Alu -1 311 11 292 200 70 30 chr5 16986320 16986420 -182643730 - LTR33 LTR ERVL -2 519 416 508 232 86 7 chr5 16986470 16986621 -182643529 - LTR33 LTR ERVL -338 183 21 4745 139 39 44 chr5 16986658 16987041 -182643109 + L1MC1 LINE L1 5452 5836 -497 2157 128 0 0 chr5 16987041 16987339 -182642811 + AluSx SINE Alu 3 300 -12 4745 139 39 44 chr5 16987339 16987833 -182642317 + L1MC1 LINE L1 5836 6324 -9 2223 104 0 0 chr5 16987836 16988157 -182641993 + AluSx SINE Alu 3 323 0 2416 98 0 0 chr5 16989136 16989443 -182640707 - AluSx SINE Alu -5 307 1 22 0 0 0 chr5 16989572 16989594 -182640556 + AT_rich Low_complexity Low_complexity 1 22 0 2364 78 3 3 chr5 16990184 16990479 -182639671 - AluSc SINE Alu -14 295 1 1186 233 64 39 chr5 16990738 16990848 -182639302 + L1ME LINE L1 4367 4473 -1673 2317 99 0 3 chr5 16990848 16991142 -182639008 - AluSg SINE Alu -17 293 1 1186 233 64 39 chr5 16991142 16991469 -182638681 + L1ME LINE L1 4473 4815 -1331 2140 114 14 3 chr5 16991503 16991800 -182638350 - AluSx SINE Alu -12 300 1 242 296 0 0 chr5 16992262 16992343 -182637807 + L1ME LINE L1 5727 5807 -314 22 0 0 0 chr5 16992401 16992423 -182637727 + AT_rich Low_complexity Low_complexity 1 22 0 329 143 16 16 chr5 16992695 16992758 -182637392 + MER5A DNA MER1_type 9 71 -118 1866 98 4 0 chr5 16992835 16993081 -182637069 - AluSx SINE Alu -10 302 56 263 234 290 0 chr5 16993353 16993460 -182636690 + MER5A DNA MER1_type 46 183 -6 2183 115 13 0 chr5 16993604 16993908 -182636242 + AluSp SINE Alu 2 309 -4 358 253 152 0 chr5 16994722 16994821 -182635329 - MER81 DNA DNA 0 114 1 2481 57 3 29 chr5 16996144 16996459 -182633691 - AluY SINE Alu -4 307 1 2074 113 46 65 chr5 16996550 16996878 -182633272 + THE1B LTR MaLR 1 323 -41 2603 64 0 6 chr5 16996878 16997189 -182632961 - AluY SINE Alu -2 309 1 2074 113 46 65 chr5 16997189 16997231 -182632919 + THE1B LTR MaLR 323 364 0 2379 95 3 9 chr5 16998241 16998556 -182631594 - AluSq SINE Alu 0 313 1 719 208 8 0 chr5 16998603 16998728 -182631422 + FLAM_A SINE Alu 2 127 -6 825 197 26 0 chr5 16999171 16999323 -182630827 + FRAM SINE Alu 1 156 -20 1248 174 4 37 chr5 16999386 16999628 -182630522 - L1MD3 LINE L1 -1022 6973 6740 2021 113 3 7 chr5 16999629 16999935 -182630215 + AluSx SINE Alu 1 305 0 2535 53 0 10 chr5 17000033 17000332 -182629818 - AluY SINE Alu -15 296 1 8263 166 23 88 chr5 17000333 17001426 -182628724 - L1M2 LINE L1 -1765 5443 4280 2188 122 20 0 chr5 17001426 17001729 -182628421 - AluSx SINE Alu 0 312 4 8263 166 23 88 chr5 17001729 17002224 -182627926 - L1M2 LINE L1 -2928 4280 3754 2311 118 0 6 chr5 17002224 17002538 -182627612 - AluSx SINE Alu 0 312 1 8263 166 23 88 chr5 17002538 17002857 -182627293 - L1M2 LINE L1 -3454 3754 3686 1734 114 0 0 chr5 17002857 17003084 -182627066 - AluSg/x SINE Alu -8 302 76 8263 166 23 88 chr5 17003084 17003303 -182626847 - L1M2 LINE L1 -3522 3686 3454 2259 127 99 23 chr5 17003306 17003699 -182626451 - MSTA LTR MaLR 0 428 6 5048 198 89 41 chr5 17003755 17005193 -182624957 - L1M2 LINE L1 -3788 3420 1920 327 260 53 77 chr5 17005193 17005362 -182624788 - MLT1K LTR MaLR -19 569 405 466 245 76 54 chr5 17005363 17005706 -182624444 - L1M2 LINE L1 -5297 1912 1539 * 2097 253 137 30 chr5 17005682 17006381 -182623769 - L1M2 LINE L1 -6399 810 37 1167 134 21 0 chr5 17006381 17006567 -182623583 - AluSg/x SINE Alu -2 310 121 278 213 0 0 chr5 17006569 17006616 -182623534 - L1 LINE L1 -6790 59 13 232 261 0 31 chr5 17006770 17006835 -182623315 + MLT1K LTR MaLR 1 63 -525 411 259 85 110 chr5 17006884 17007320 -182622830 + MLT1K LTR MaLR 164 588 0 355 241 7 7 chr5 17008553 17008690 -182621460 + CT-rich Low_complexity Low_complexity 2 138 0 453 321 18 87 chr5 17009258 17009292 -182620858 - L2 LINE L2 -1 3312 3277 294 29 0 0 chr5 17009292 17009327 -182620823 + (TG)n Simple_repeat Simple_repeat 1 35 0 453 321 18 87 chr5 17009327 17009458 -182620692 - L2 LINE L2 -36 3277 3139 2224 135 15 42 chr5 17009458 17009859 -182620291 + MLT1B LTR MaLR 1 390 0 453 321 18 87 chr5 17009859 17010072 -182620078 - L2 LINE L2 -174 3139 2959 14481 118 32 53 chr5 17010297 17010474 -182619676 - Tigger1 DNA MER2_type 0 2418 2239 2179 121 7 0 chr5 17010474 17010771 -182619379 + AluSc SINE Alu 1 299 -10 14481 118 32 53 chr5 17010771 17011196 -182618954 - Tigger1 DNA MER2_type -179 2239 1807 2432 91 0 0 chr5 17011196 17011505 -182618645 + AluSg SINE Alu 1 309 -1 14481 118 32 53 chr5 17011505 17013370 -182616780 - Tigger1 DNA MER2_type -611 1807 1 2068 238 24 24 chr5 17014278 17014736 -182615414 + LTR40a LTR ERVL 62 519 0 22 56 0 0 chr5 17014754 17014790 -182615360 + AT_rich Low_complexity Low_complexity 1 36 0 1896 88 0 0 chr5 17014848 17015076 -182615074 - AluSc SINE Alu -21 288 61 555 329 32 5 chr5 17015116 17015332 -182614818 - MIR SINE MIR -4 258 37 2011 178 20 0 chr5 17015478 17015826 -182614324 + MLT1A1 LTR MaLR 11 365 0 1885 117 50 18 chr5 17016285 17016567 -182613583 + AluSq SINE Alu 1 291 -22 2190 133 33 28 chr5 17017341 17017703 -182612447 + THE1B LTR MaLR 1 364 0 2504 78 0 0 chr5 17018269 17018575 -182611575 - AluY SINE Alu -5 306 1 236 307 58 58 chr5 17018601 17018738 -182611412 + MER5B DNA MER1_type 20 156 -22 2791 135 57 60 chr5 17018920 17019521 -182610629 - MER4D LTR ERV1 -1 865 307 2285 117 0 0 chr5 17019521 17019820 -182610330 + AluSx SINE Alu 1 299 -13 4031 145 45 24 chr5 17019829 17020110 -182610040 + MER50 LTR ERV1 1 275 -459 1934 108 0 7 chr5 17020110 17020388 -182609762 - AluSc SINE Alu 0 309 34 4031 145 45 24 chr5 17020388 17020803 -182609347 + MER50 LTR ERV1 275 711 -23 4583 119 26 45 chr5 17020804 17021489 -182608661 + MER49 LTR ERV1 196 892 -31 2081 130 0 26 chr5 17021489 17021796 -182608354 + AluSx SINE Alu 1 299 -13 222 37 0 0 chr5 17021796 17021823 -182608327 + (GA)n Simple_repeat Simple_repeat 2 28 0 4583 119 26 45 chr5 17021823 17021878 -182608272 + MER49 LTR ERV1 890 923 0 2368 99 0 7 chr5 17022282 17022584 -182607566 + AluSx SINE Alu 2 301 -11 2227 105 3 0 chr5 17023829 17024125 -182606025 + AluSp SINE Alu 1 297 -16 316 229 160 38 chr5 17024602 17024733 -182605417 - MIR SINE MIR 0 262 116 946 188 17 6 chr5 17024740 17024916 -182605234 - MLT1A1 LTR MaLR -185 180 3 954 248 58 69 chr5 17024921 17025312 -182604838 - MLT1G LTR MaLR -217 338 16 429 54 0 0 chr5 17026026 17026082 -182604068 + (TG)n Simple_repeat Simple_repeat 1 56 0 451 276 0 24 chr5 17026223 17026350 -182603800 + MLT1K LTR MaLR 437 560 -28 703 276 112 53 chr5 17027316 17027402 -182602748 - HAL1 LINE L1 -127 2380 2300 2056 126 10 7 chr5 17027402 17027711 -182602439 - AluSx SINE Alu -2 310 1 703 276 112 53 chr5 17027711 17028168 -182601982 - HAL1 LINE L1 -207 2300 1805 1440 124 179 19 chr5 17028310 17028425 -182601725 - AluSg1 SINE Alu -11 298 203 2487 99 8 6 chr5 17028425 17028779 -182601371 - THE1A LTR MaLR 0 355 1 11621 105 5 1 chr5 17028779 17030352 -182599798 - THE1A-int LTR MaLR 0 1580 1 2485 107 8 8 chr5 17030352 17030707 -182599443 - THE1A LTR MaLR 0 355 1 1440 124 179 19 chr5 17030707 17030846 -182599304 - AluSg1 SINE Alu -105 204 1 259 301 21 11 chr5 17031095 17031188 -182598962 + MIR SINE MIR 31 124 -138 181 261 23 68 chr5 17031429 17031517 -182598633 - MIR SINE MIR -1 261 178 2072 140 10 0 chr5 17031531 17031962 -182598188 - AluSx SINE Alu 0 434 1 454 222 90 35 chr5 17032008 17032152 -182597998 + MIR SINE MIR 111 262 0 196 261 0 0 chr5 17032519 17032565 -182597585 + L2 LINE L2 3256 3301 -12 1489 78 74 18 chr5 17032787 17033004 -182597146 - MER30 DNA MER1_type -1 229 1 296 198 209 11 chr5 17033213 17033304 -182596846 - L2 LINE L2 0 3313 3205 1987 159 0 3 chr5 17033767 17034068 -182596082 + AluJb SINE Alu 1 300 -12 707 228 7 0 chr5 17034641 17034790 -182595360 + MER58B DNA MER1_type 7 156 -185 1019 168 0 6 chr5 17034792 17034953 -182595197 + FRAM SINE Alu 1 155 -21 715 207 14 21 chr5 17035028 17035173 -182594977 + MER58B DNA MER1_type 196 339 -2 316 268 109 7 chr5 17035369 17035507 -182594643 - L1ME4a LINE L1 -39 6082 5931 455 274 91 32 chr5 17035560 17035746 -182594404 - MLT1K LTR MaLR -111 477 281 1857 190 16 38 chr5 17035780 17036153 -182593997 - MLT1A1 LTR MaLR 0 365 1 345 329 20 13 chr5 17036259 17036408 -182593742 - MIR3 SINE MIR -2 206 57 650 229 0 0 chr5 17036542 17036673 -182593477 + FLAM_A SINE Alu 2 132 -1 2449 91 3 0 chr5 17036675 17036984 -182593166 + AluY SINE Alu 1 310 -1 193 308 145 38 chr5 17037463 17037578 -182592572 - L2 LINE L2 -2 3270 3132 2203 117 0 13 chr5 17037578 17037887 -182592263 - AluSx SINE Alu -7 305 1 193 308 145 38 chr5 17037887 17037930 -182592220 - L2 LINE L2 -140 3132 3095 21 0 0 0 chr5 17038499 17038520 -182591630 + AT_rich Low_complexity Low_complexity 1 21 0 349 125 0 0 chr5 17038533 17038589 -182591561 - Alu SINE Alu -1 299 244 1340 160 38 52 chr5 17038591 17038878 -182591272 - L1M3 LINE L1 -557 5623 5341 1244 184 5 9 chr5 17038881 17039104 -182591046 - AluJo SINE Alu -5 307 86 963 262 0 5 chr5 17039161 17039382 -182590768 - AluJo SINE Alu -92 220 1 458 252 31 25 chr5 17039655 17039814 -182590336 - MIR SINE MIR -55 207 48 1317 123 238 12 chr5 17039871 17040115 -182590035 - AluSg1 SINE Alu -10 299 1 6741 167 123 38 chr5 17040144 17041709 -182588441 + pTR5 LTR ERV1 741 2438 0 238 156 0 0 chr5 17042067 17042103 -182588047 + L1MB3 LINE L1 6107 6145 -38 2090 119 7 14 chr5 17042103 17042396 -182587754 + AluSx SINE Alu 1 291 -21 632 261 101 5 chr5 17042978 17043166 -182586984 - MIR SINE MIR -30 232 27 464 225 46 40 chr5 17043705 17043856 -182586294 + MIR SINE MIR 109 260 -2 23 0 0 0 chr5 17044857 17044880 -182585270 + GC_rich Low_complexity Low_complexity 1 23 0 183 42 0 0 chr5 17045017 17045041 -182585109 + (CGGGG)n Simple_repeat Simple_repeat 1 24 0 2058 92 3 68 chr5 17045564 17045890 -182584260 + AluSg SINE Alu 1 305 -5 1200 231 132 21 chr5 17051607 17052059 -182578091 - MLT1J LTR MaLR -4 482 7 412 272 185 30 chr5 17052101 17052539 -182577611 - L2 LINE L2 -1 3312 2807 684 154 9 0 chr5 17052554 17052664 -182577486 + MER81 DNA DNA 3 113 -1 1926 130 35 3 chr5 17052719 17053003 -182577147 + AluSx SINE Alu 1 293 -19 217 232 147 32 chr5 17053297 17053392 -182576758 + MER5B DNA MER1_type 7 112 -66 268 247 78 0 chr5 17053434 17053511 -182576639 - MER5A DNA MER1_type -106 83 1 270 288 62 0 chr5 17054194 17054274 -182575876 + L3 LINE CR1 762 846 -731 431 327 82 67 chr5 17054742 17054851 -182575299 + L3 LINE CR1 911 1017 -560 1519 219 60 0 chr5 17054851 17055170 -182574980 + MER58B DNA MER1_type 4 341 0 431 327 82 67 chr5 17055170 17055390 -182574760 + L3 LINE CR1 1017 1245 -332 224 298 0 0 chr5 17055742 17055799 -182574351 + L3 LINE CR1 1254 1310 -267 240 306 114 42 chr5 17055862 17056222 -182573928 + L2 LINE L2 2885 3270 -2 199 295 98 0 chr5 17056232 17056354 -182573796 + L3 LINE CR1 1363 1496 -81 243 0 0 0 chr5 17058691 17058718 -182571432 + (T)n Simple_repeat Simple_repeat 1 27 0 855 185 107 56 chr5 17059721 17060080 -182570070 - MSTC LTR MaLR 0 428 1 261 255 51 20 chr5 17060092 17060190 -182569960 + MIR SINE MIR 47 147 -115 260 324 28 19 chr5 17060211 17060319 -182569831 - MIR SINE MIR 0 262 154 247 298 48 24 chr5 17060396 17060520 -182569630 - MIR SINE MIR -105 157 31 312 297 11 0 chr5 17060526 17060617 -182569533 + MIR SINE MIR 153 244 -18 375 335 65 6 chr5 17061479 17061649 -182568501 + L1MC/D LINE L1 5578 5757 -2051 685 136 0 59 chr5 17061657 17061775 -182568375 + FRAM SINE Alu 43 153 -23 228 268 14 0 chr5 17061800 17061871 -182568279 + L1MC/D LINE L1 5788 5859 -1949 2109 125 3 3 chr5 17062257 17062554 -182567596 + AluSp SINE Alu 1 297 -16 2757 77 30 6 chr5 17063090 17063456 -182566694 + THE1C LTR MaLR 1 375 0 245 289 132 35 chr5 17063650 17063764 -182566386 - MIR SINE MIR -118 144 20 23 86 0 0 chr5 17063832 17063890 -182566260 + AT_rich Low_complexity Low_complexity 1 58 0 1745 180 10 3 chr5 17065490 17065785 -182564365 - AluJb SINE Alu -15 297 1 3597 180 85 12 chr5 17065937 17066832 -182563318 - L1ME1 LINE L1 -29 6137 5180 203 161 0 0 chr5 17066934 17066965 -182563185 + (TG)n Simple_repeat Simple_repeat 2 32 0 1443 206 4 11 chr5 17067099 17067371 -182562779 + AluJo SINE Alu 1 270 -42 291 57 0 0 chr5 17067371 17067406 -182562744 - THE1A LTR MaLR 0 355 321 * 332 80 22 0 chr5 17067394 17067448 -182562702 - THE1B LTR MaLR -300 55 1 10897 97 12 46 chr5 17067448 17069083 -182561067 - THE1B-int LTR MaLR 0 1580 1 2156 116 53 44 chr5 17069083 17069444 -182560706 - THE1B LTR MaLR 0 364 1 296 219 68 68 chr5 17069562 17069708 -182560442 - MIR SINE MIR -57 205 60 2285 102 0 3 chr5 17069996 17070291 -182559859 + AluSx SINE Alu 1 294 -18 432 330 97 0 chr5 17070909 17071115 -182559035 + MIR SINE MIR 19 244 -18 1585 197 39 28 chr5 17071266 17071622 -182558528 - MLT1A1 LTR MaLR -5 360 1 2532 30 40 0 chr5 17072671 17072967 -182557183 - AluY SINE Alu -3 308 1 261 238 0 0 chr5 17073880 17073960 -182556190 + (TA)n Simple_repeat Simple_repeat 1 80 0 2017 184 25 70 chr5 17074167 17074694 -182555456 + MLT1D LTR MaLR 1 503 -2 656 122 47 61 chr5 17075931 17075978 -182554172 - L1MB3 LINE L1 -4 6179 6133 2241 96 7 3 chr5 17075978 17076271 -182553879 - AluSq SINE Alu -19 294 1 656 122 47 61 chr5 17076271 17076371 -182553779 - L1MB3 LINE L1 -50 6133 6034 277 247 112 0 chr5 17079035 17079124 -182551026 - MER5C DNA MER1_type 0 324 226 257 164 104 15 chr5 17079136 17079203 -182550947 - MER5C DNA MER1_type -202 122 50 2143 109 6 16 chr5 17080167 17080478 -182549672 + AluSx SINE Alu 1 308 -4 2393 93 0 13 chr5 17081115 17081427 -182548723 + AluSq SINE Alu 3 310 -3 300 212 0 0 chr5 17081427 17081493 -182548657 + (TA)n Simple_repeat Simple_repeat 1 66 0 1095 106 0 0 chr5 17081562 17081704 -182548446 + AluSg/x SINE Alu 155 296 -14 2352 228 101 136 chr5 17084303 17084980 -182545170 + L1MEc LINE L1 588 1287 -5109 1841 164 13 7 chr5 17084980 17085284 -182544866 + AluJo SINE Alu 1 306 -6 2352 228 101 136 chr5 17085284 17085640 -182544510 + L1MEc LINE L1 1287 1654 -4742 841 195 0 0 chr5 17085640 17085768 -182544382 + FAM SINE Alu 41 168 -17 2352 228 101 136 chr5 17085768 17085798 -182544352 + L1MEc LINE L1 1654 1684 -4712 2041 138 6 10 chr5 17085798 17086109 -182544041 + AluSx SINE Alu 1 310 -2 2352 228 101 136 chr5 17086109 17086309 -182543841 + L1MEc LINE L1 1684 1889 -4507 2336 95 0 0 chr5 17086309 17086604 -182543546 + AluSx SINE Alu 1 295 -17 2352 228 101 136 chr5 17086604 17086699 -182543451 + L1MEc LINE L1 1889 1986 -4410 2287 101 0 23 chr5 17086699 17087005 -182543145 + AluSc SINE Alu 1 299 -10 2352 228 101 136 chr5 17087005 17087277 -182542873 + L1MEc LINE L1 1986 2288 -4108 264 200 0 0 chr5 17087416 17087476 -182542674 + (TA)n Simple_repeat Simple_repeat 1 60 0 27 29 0 0 chr5 17087784 17087818 -182542332 + AT_rich Low_complexity Low_complexity 1 34 0 243 192 104 104 chr5 17088056 17088181 -182541969 - MLT1K LTR MaLR 0 588 464 1954 167 24 0 chr5 17089995 17090324 -182539826 + L1MA9 LINE L1 5376 5712 -600 506 143 62 27 chr5 17090357 17090469 -182539681 - L1MA9 LINE L1 -30 6282 6167 2065 172 154 44 chr5 17090516 17090608 -182539542 + L1MA9 LINE L1 5681 5762 -550 345 24 0 0 chr5 17090608 17090650 -182539500 + (CA)n Simple_repeat Simple_repeat 1 42 0 2065 172 154 44 chr5 17090650 17091104 -182539046 + L1MA9 LINE L1 5762 6287 -25 4841 141 19 70 chr5 17091769 17092156 -182537994 - L1MB8 LINE L1 -6 6172 5767 1575 191 32 0 chr5 17092156 17092438 -182537712 - AluJb SINE Alu -17 295 5 4841 141 19 70 chr5 17092438 17092917 -182537233 - L1MB8 LINE L1 -411 5767 5265 2246 133 36 30 chr5 17092917 17093278 -182536872 - THE1B LTR MaLR 0 364 2 2058 117 7 7 chr5 17093278 17093559 -182536591 - AluSx SINE Alu -31 281 1 4841 141 19 70 chr5 17093559 17093713 -182536437 - L1MB8 LINE L1 -911 5267 5180 21 0 0 0 chr5 17094170 17094191 -182535959 + AT_rich Low_complexity Low_complexity 1 21 0 2012 141 7 7 chr5 17094471 17094776 -182535374 - AluJb SINE Alu -7 305 1 186 235 0 0 chr5 17095056 17095090 -182535060 + MIR SINE MIR 25 58 -150 2410 97 3 0 chr5 17095130 17095438 -182534712 - AluSx SINE Alu -3 309 1 2241 111 7 0 chr5 17095980 17096287 -182533863 + AluSc SINE Alu 1 309 0 261 342 63 9 chr5 17096346 17096457 -182533693 - L2 LINE L2 -12 3260 3144 1967 122 3 18 chr5 17096582 17096868 -182533282 + AluSx SINE Alu 30 311 -1 504 179 75 0 chr5 17097098 17097204 -182532946 + L1PA8A LINE L1 5990 6103 -28 393 226 11 21 chr5 17098207 17098300 -182531850 + L1PA8A LINE L1 6038 6150 -4 222 37 0 0 chr5 17098358 17098385 -182531765 + (CA)n Simple_repeat Simple_repeat 2 28 0 448 163 50 0 chr5 17098386 17098466 -182531684 + L2 LINE L2 3175 3258 -55 853 181 0 0 chr5 17099886 17100019 -182530131 - FLAM_C SINE Alu -10 133 1 2609 62 3 0 chr5 17100637 17100944 -182529206 - AluSp SINE Alu -5 308 1 5010 131 26 33 chr5 17100966 17101805 -182528345 - L1PB4 LINE L1 -7 6149 5317 5787 167 16 104 chr5 17103782 17104146 -182526004 - L1PB4 LINE L1 -1069 5077 4682 237 90 28 0 chr5 17104146 17104185 -182525965 - Alu SINE Alu -11 288 253 5787 167 16 104 chr5 17104185 17104203 -182525947 - L1PB4 LINE L1 -1464 4682 4664 1224 157 104 74 chr5 17104203 17104502 -182525648 - AluSg SINE Alu 0 310 3 5787 167 16 104 chr5 17104502 17104685 -182525465 - L1PB4 LINE L1 -1482 4664 4466 1761 92 4 0 chr5 17104685 17104913 -182525237 - AluY SINE Alu -1 310 82 5787 167 16 104 chr5 17104913 17105259 -182524891 - L1PB4 LINE L1 -1680 4466 4091 2297 113 3 0 chr5 17105259 17105568 -182524582 + AluSx SINE Alu 1 310 -2 5787 167 16 104 chr5 17105568 17106427 -182523723 - L1PB4 LINE L1 -2055 4091 3465 1368 54 12 6 chr5 17106427 17106595 -182523555 - L1MA1 LINE L1 -4 6298 6130 5787 167 16 104 chr5 17106595 17106663 -182523487 - L1PB4 LINE L1 -2681 3465 3393 2251 105 10 3 chr5 17106672 17106968 -182523182 - AluSq SINE Alu -15 298 1 1842 187 56 37 chr5 17106996 17107389 -182522761 + Charlie1b DNA MER1_type 50 455 -2306 2831 178 30 44 chr5 17107389 17107955 -182522195 - MER74A LTR ERVL 0 558 1 1842 187 56 37 chr5 17107955 17108026 -182522124 + Charlie1b DNA MER1_type 455 523 0 348 189 14 27 chr5 17108026 17108098 -182522052 - MLT1I LTR MaLR -16 393 323 336 233 41 0 chr5 17108870 17108943 -182521207 + MIR SINE MIR 3 78 -184 1272 122 0 94 chr5 17110236 17110491 -182519659 - AluSg/x SINE Alu -5 307 77 439 105 0 79 chr5 17110491 17110513 -182519637 - AluSg/x SINE Alu -166 144 122 189 0 0 0 chr5 17110513 17110534 -182519616 + (TA)n Simple_repeat Simple_repeat 1 21 0 439 105 0 79 chr5 17110534 17110587 -182519563 - AluSg/x SINE Alu -188 122 75 1066 57 0 0 chr5 17110625 17110747 -182519403 - AluSg SINE Alu -188 122 1 2588 48 0 16 chr5 17110770 17111083 -182519067 - AluY SINE Alu -3 308 1 442 250 110 22 chr5 17111871 17112007 -182518143 - MIR SINE MIR -37 225 78 760 204 0 58 chr5 17112144 17112295 -182517855 + MLT1A2 LTR MaLR 1 142 -232 1519 170 110 28 chr5 17112295 17112613 -182517537 - MER2 DNA MER2_type 0 344 1 760 204 0 58 chr5 17112613 17112633 -182517517 + MLT1A2 LTR MaLR 142 162 -212 1552 199 33 16 chr5 17112637 17112943 -182517207 + AluJo SINE Alu 1 311 -1 2732 161 14 6 chr5 17112946 17113438 -182516712 + L1MA4 LINE L1 4701 5196 -950 1011 153 153 5 chr5 17113438 17113686 -182516464 + AluJo SINE Alu 73 350 0 2547 139 83 14 chr5 17113689 17114185 -182515965 + L1MA4 LINE L1 5769 6298 -2 1156 209 304 9 chr5 17116090 17116322 -182513828 - Charlie2 DNA MER1_type -290 2572 2410 1621 169 24 0 chr5 17116322 17116570 -182513580 + AluJo SINE Alu 1 254 -58 1156 209 304 9 chr5 17116570 17116910 -182513240 - Charlie2 DNA MER1_type -452 2410 1831 641 245 121 109 chr5 17116952 17117361 -182512789 - Charlie2b DNA MER1_type -2099 683 265 1216 181 67 38 chr5 17117361 17117524 -182512626 - MER33 DNA MER1_type -2261 324 167 1973 149 7 0 chr5 17117524 17117812 -182512338 + AluJb SINE Alu 1 290 -22 1216 181 67 38 chr5 17117812 17117963 -182512187 - MER33 DNA MER1_type -2418 167 1 641 245 121 109 chr5 17117963 17118092 -182512058 - Charlie2b DNA MER1_type -2517 265 139 3311 84 8 61 chr5 17118429 17118907 -182511243 - MLT2A2 LTR ERVL 0 453 1 1415 165 59 87 chr5 17119198 17119555 -182510595 - MLT1A2 LTR MaLR -27 347 1 1026 57 0 0 chr5 17119983 17120106 -182510044 + L1PA8 LINE L1 6050 6172 0 2197 115 0 34 chr5 17120855 17121176 -182508974 + AluSx SINE Alu 1 310 -2 326 186 302 25 chr5 17121255 17121390 -182508760 - Charlie7 DNA MER1_type -35 2577 2481 2200 109 0 7 chr5 17121390 17121684 -182508466 - AluSx SINE Alu -14 298 7 326 186 302 25 chr5 17121684 17121790 -182508360 - Charlie7 DNA MER1_type -131 2481 2269 1783 172 10 0 chr5 17121791 17122082 -182508068 - AluSx SINE Alu -14 298 5 2584 140 45 51 chr5 17122109 17122243 -182507907 - L1MC3 LINE L1 -6 7779 7646 1969 131 10 10 chr5 17122243 17122533 -182507617 - AluJb SINE Alu -11 301 12 2584 140 45 51 chr5 17122533 17122911 -182507239 - L1MC3 LINE L1 -139 7646 7270 1469 203 25 69 chr5 17122911 17123105 -182507045 - ERVL LTR ERVL -2346 3418 3242 1294 176 80 83 chr5 17123105 17123394 -182506756 - AluJo SINE Alu -14 288 1 1469 203 25 69 chr5 17123394 17123519 -182506631 - ERVL LTR ERVL -2522 3242 3113 6072 223 64 12 chr5 17123548 17124331 -182505819 - ERVL LTR ERVL -2769 2995 2254 2177 91 0 49 chr5 17124331 17124639 -182505511 - AluSg SINE Alu -17 293 1 6072 223 64 12 chr5 17124639 17125496 -182504654 - ERVL LTR ERVL -3510 2254 1205 792 158 16 8 chr5 17125501 17125628 -182504522 + ERVL LTR ERVL 2065 2192 -3572 443 252 39 31 chr5 17125625 17125752 -182504398 - ERVL LTR ERVL -4509 1171 1018 * 1710 234 55 7 chr5 17125752 17126192 -182503958 - MLT1C LTR MaLR 0 467 7 295 271 181 65 chr5 17126346 17126671 -182503479 + L2 LINE L2 2599 2961 -353 23 97 0 0 chr5 17127583 17127655 -182502495 + GC_rich Low_complexity Low_complexity 1 72 0 30 27 0 0 chr5 17127683 17127720 -182502430 + GC_rich Low_complexity Low_complexity 1 37 0 329 135 19 0 chr5 17128652 17128704 -182501446 - MSTB LTR MaLR -373 53 1 1781 163 7 7 chr5 17130078 17130372 -182499778 - AluJo SINE Alu -16 296 3 2254 101 0 3 chr5 17131781 17132077 -182498073 + AluSq SINE Alu 1 295 -18 1716 181 7 3 chr5 17132189 17132476 -182497674 + AluJo SINE Alu 1 288 -24 1497 103 48 44 chr5 17132514 17132766 -182497384 - L1MA5A LINE L1 -24 6273 6021 22 35 0 0 chr5 17133070 17133099 -182497051 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr5 17133120 17133148 -182497002 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 17133286 17133309 -182496841 + AT_rich Low_complexity Low_complexity 1 23 0 1202 192 4 4 chr5 17133313 17133542 -182496608 - AluJo SINE Alu -21 291 63 317 212 40 71 chr5 17134017 17134116 -182496034 - MIR3 SINE MIR -23 185 90 335 318 52 57 chr5 17134562 17134773 -182495377 - MIR SINE MIR -45 217 8 313 262 124 34 chr5 17135245 17135512 -182494638 - HAL1 LINE L1 -2060 447 157 2017 102 56 22 chr5 17137127 17137173 -182492977 - HSMAR2 DNA Mariner -2 1300 1257 1927 159 10 0 chr5 17137173 17137475 -182492675 + AluJo SINE Alu 1 305 -7 2017 102 56 22 chr5 17137475 17137752 -182492398 - HSMAR2 DNA Mariner -45 1257 966 1511 101 5 0 chr5 17137745 17137963 -182492187 - HSMAR2 DNA Mariner -1081 221 3 * 873 232 71 5 chr5 17138567 17138765 -182491385 + MER58A DNA MER1_type 4 214 -10 317 304 18 9 chr5 17138789 17138901 -182491249 - L1MEd LINE L1 -5771 348 236 242 235 136 25 chr5 17139032 17139113 -182491037 + L2 LINE L2 3151 3240 -32 22 0 0 0 chr5 17139825 17139847 -182490303 + AT_rich Low_complexity Low_complexity 1 22 0 444 283 66 33 chr5 17139847 17140059 -182490091 + L2 LINE L2 3046 3264 -8 342 283 143 59 chr5 17140611 17141254 -182488896 - L2 LINE L2 -5 3308 2566 219 238 16 0 chr5 17142047 17142110 -182488040 + L2 LINE L2 2484 2547 -767 23 33 0 0 chr5 17142326 17142356 -182487794 + AT_rich Low_complexity Low_complexity 1 30 0 2257 99 0 3 chr5 17143476 17143770 -182486380 + AluSq SINE Alu 1 293 -20 442 81 0 54 chr5 17144965 17145039 -182485111 + L1PA16 LINE L1 6097 6166 0 1100 90 6 6 chr5 17145039 17145195 -182484955 + Tigger1 DNA MER2_type 2083 2238 -180 293 315 38 56 chr5 17145199 17145412 -182484738 + L3 LINE CR1 787 995 -582 191 0 103 0 chr5 17145412 17145441 -182484709 + T-rich Low_complexity Low_complexity 2 33 0 310 254 169 14 chr5 17145615 17145757 -182484393 + L3 LINE CR1 1181 1344 -233 649 137 36 86 chr5 17145836 17145975 -182484175 + FLAM_A SINE Alu 1 132 -1 228 225 0 0 chr5 17146281 17146321 -182483829 + Alu SINE Alu 145 184 -119 25 31 0 0 chr5 17148949 17148981 -182481169 + AT_rich Low_complexity Low_complexity 1 32 0 1186 176 0 38 chr5 17149004 17149214 -182480936 - AluJo SINE Alu -18 294 93 348 278 95 16 chr5 17151130 17151256 -182478894 + L2 LINE L2 3136 3271 -1 375 249 120 49 chr5 17151667 17151892 -182478258 - MIR SINE MIR 0 262 22 2619 189 51 2 chr5 17153031 17153543 -182476607 - MLT1F1 LTR MaLR -29 538 2 3066 158 58 75 chr5 17154369 17155361 -182474789 - L1MB8 LINE L1 -81 6089 5234 23 0 0 0 chr5 17155379 17155402 -182474748 + AT_rich Low_complexity Low_complexity 1 23 0 327 167 0 0 chr5 17156188 17156242 -182473908 - tRNA-Met-e tRNA tRNA -21 54 1 24 0 0 0 chr5 17157957 17157981 -182472169 + AT_rich Low_complexity Low_complexity 1 24 0 219 139 0 0 chr5 17159746 17159782 -182470368 + (TG)n Simple_repeat Simple_repeat 2 37 0 2194 115 3 0 chr5 17159889 17160176 -182469974 - AluSx SINE Alu -24 288 1 182 298 32 53 chr5 17161587 17161681 -182468469 + MIR SINE MIR 46 137 -125 283 252 184 27 chr5 17162717 17162864 -182467286 - L1MC/D LINE L1 -2322 5486 5317 288 294 0 33 chr5 17163219 17163399 -182466751 + C-rich Low_complexity Low_complexity 4 177 0 241 286 14 0 chr5 17164623 17164693 -182465457 - MER91 DNA MER1_type -3 137 67 191 256 22 89 chr5 17165008 17165098 -182465052 - L2 LINE L2 -1005 2309 2226 351 0 0 0 chr5 17166024 17166063 -182464087 + (A)n Simple_repeat Simple_repeat 1 39 0 2485 75 0 3 chr5 17166749 17167055 -182463095 + AluSc SINE Alu 1 305 -4 835 160 0 0 chr5 17167727 17167858 -182462292 - FLAM_A SINE Alu -2 131 1 314 215 37 37 chr5 17168081 17168188 -182461962 - MIR3 SINE MIR -1 207 101 2243 117 0 3 chr5 17171595 17171893 -182458257 - AluSq SINE Alu -16 297 1 27 29 0 0 chr5 17172596 17172630 -182457520 + AT_rich Low_complexity Low_complexity 1 34 0 622 302 253 12 chr5 17174307 17175472 -182454678 + L2 LINE L2 463 1908 -1406 2304 99 7 3 chr5 17177828 17178130 -182452020 - AluSq SINE Alu -10 303 1 312 316 37 15 chr5 17178725 17178861 -182451289 - L1ME1 LINE L1 -18 6148 6010 1907 122 37 0 chr5 17178920 17179218 -182450932 + AluSx SINE Alu 2 309 0 2847 245 165 76 chr5 17180050 17180409 -182449741 + HAL1 LINE L1 117 443 -2064 1437 158 8 0 chr5 17180409 17180643 -182449507 - MER46A DNA MER2_type 0 236 1 2847 245 165 76 chr5 17180643 17181229 -182448921 + HAL1 LINE L1 443 975 -1532 2032 104 3 31 chr5 17181229 17181517 -182448633 + AluSp SINE Alu 2 281 -32 2847 245 165 76 chr5 17181517 17182384 -182447766 + HAL1 LINE L1 975 2092 -415 2469 56 3 0 chr5 17184349 17184654 -182445496 + AluY SINE Alu 1 306 -5 3804 216 92 20 chr5 17185071 17186071 -182444079 + L1MC3 LINE L1 6702 7773 -12 1371 166 109 7 chr5 17186082 17186365 -182443785 + AluJo SINE Alu 1 312 0 2047 130 3 0 chr5 17186737 17187038 -182443112 + AluSp SINE Alu 3 304 -9 245 310 82 6 chr5 17187833 17187991 -182442159 + MIR SINE MIR 16 185 -77 181 244 67 0 chr5 17188002 17188047 -182442103 + MER5C DNA MER1_type 31 78 -246 337 191 148 26 chr5 17188333 17188448 -182441702 + L1ME4a LINE L1 5990 6118 -3 1516 91 0 0 chr5 17188450 17188648 -182441502 - AluSc SINE Alu -16 293 96 290 287 30 0 chr5 17189016 17189117 -182441033 - L2 LINE L2 -491 2823 2720 561 204 116 33 chr5 17190400 17190581 -182439569 + L1MB2 LINE L1 5976 6171 0 389 255 161 21 chr5 17190850 17191042 -182439108 - MIR SINE MIR -23 239 21 2140 89 10 0 chr5 17191755 17192048 -182438102 - AluSx SINE Alu -12 300 5 991 81 7 0 chr5 17192050 17192186 -182437964 - AluSq/x SINE Alu -175 137 1 480 363 11 6 chr5 17195371 17195553 -182434597 - MIR SINE MIR -74 188 6 1782 154 173 23 chr5 17196784 17197210 -182432940 + LTR10A LTR ERV1 13 548 -61 458 100 0 0 chr5 17197891 17197961 -182432189 + L1MA3 LINE L1 6236 6305 0 1549 195 160 15 chr5 17198196 17198602 -182431548 - MLT1C LTR MaLR -2 465 1 288 0 0 0 chr5 17198706 17198738 -182431412 + (T)n Simple_repeat Simple_repeat 1 32 0 205 228 11 54 chr5 17199323 17199415 -182430735 + CT-rich Low_complexity Low_complexity 2 89 0 272 254 0 0 chr5 17199439 17199494 -182430656 + MER91A DNA MER1_type 1 55 -141 531 132 211 44 chr5 17201346 17201460 -182428690 + FLAM_C SINE Alu 1 133 0 215 360 81 0 chr5 17201639 17201750 -182428400 - L2 LINE L2 -21 3251 3132 2223 112 0 0 chr5 17201834 17202139 -182428011 + AluSx SINE Alu 1 305 -7 301 222 148 64 chr5 17202370 17202555 -182427595 + MIR3 SINE MIR 14 202 -6 180 176 0 0 chr5 17208986 17209020 -182421130 + CT-rich Low_complexity Low_complexity 2 35 0 3654 63 21 7 chr5 17209027 17209541 -182420609 - LTR8 LTR ERV1 -104 587 1 570 79 40 0 chr5 17209541 17209617 -182420533 - HUERS-P1 LTR ERV1 0 6263 6185 204 238 32 32 chr5 17209620 17209683 -182420467 - MIR SINE MIR -196 66 4 1506 147 77 25 chr5 17209997 17210282 -182419868 + AluJo SINE Alu 1 300 -12 286 337 151 35 chr5 17210514 17210713 -182419437 + MIR SINE MIR 34 255 -7 406 310 70 0 chr5 17211532 17211661 -182418489 + MIR3 SINE MIR 24 161 -47 182 234 43 0 chr5 17213063 17213110 -182417040 + L2 LINE L2 2995 3043 -229 1543 190 7 7 chr5 17214725 17215015 -182415135 + AluJo SINE Alu 1 290 -22 549 336 184 16 chr5 17215452 17215958 -182414192 - L2 LINE L2 -1366 1948 1358 216 0 0 0 chr5 17216495 17216519 -182413631 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2014 109 53 0 chr5 17217493 17217778 -182412372 + AluSq SINE Alu 1 300 -13 234 271 57 0 chr5 17217789 17217859 -182412291 - L3 LINE CR1 -23 1554 1481 226 79 53 0 chr5 17218390 17218428 -182411722 - L2 LINE L2 -2 3311 3272 35 0 0 0 chr5 17220113 17220148 -182410002 + AT_rich Low_complexity Low_complexity 1 35 0 3169 186 55 2 chr5 17220513 17221146 -182409004 + L1MB3 LINE L1 5517 6183 0 286 331 8 8 chr5 17221670 17221803 -182408347 - L1ME LINE L1 -355 5766 5634 184 245 61 0 chr5 17221968 17222017 -182408133 + L2 LINE L2 3221 3272 0 1807 164 3 22 chr5 17222167 17222479 -182407671 + AluJo SINE Alu 1 306 -6 540 176 0 0 chr5 17222480 17222582 -182407568 + GA-rich Low_complexity Low_complexity 5 106 0 2646 172 15 13 chr5 17223555 17224021 -182406129 + MLT1C LTR MaLR 1 467 0 773 238 144 61 chr5 17224181 17224462 -182405688 + LTR56 LTR ERV1 1 328 -117 2188 100 3 7 chr5 17224462 17224763 -182405387 - AluSx SINE Alu -12 300 1 773 238 144 61 chr5 17224763 17224892 -182405258 + LTR56 LTR ERV1 328 445 0 193 343 82 0 chr5 17226078 17226151 -182403999 - L2 LINE L2 -9 3263 3185 1947 120 40 0 chr5 17226507 17226807 -182403343 + AluSx SINE Alu 1 312 0 1743 249 55 38 chr5 17226812 17227339 -182402811 + MLT1H LTR MaLR 1 536 -13 1740 170 0 14 chr5 17228810 17229122 -182401028 + AluJo SINE Alu 1 308 0 29 28 0 0 chr5 17230187 17230223 -182399927 + AT_rich Low_complexity Low_complexity 1 36 0 186 103 0 0 chr5 17232325 17232354 -182397796 + (TG)n Simple_repeat Simple_repeat 1 29 0 1097 138 20 26 chr5 17232836 17233031 -182397119 - L1MC1 LINE L1 0 6333 6140 1691 90 65 29 chr5 17233033 17233312 -182396838 - Tigger7 DNA MER2_type 0 2487 2199 996 207 6 0 chr5 17233301 17233475 -182396675 - Tigger7 DNA MER2_type -530 175 1 * 481 130 0 26 chr5 17233480 17233557 -182396593 - L1MC1 LINE L1 -194 6139 6065 610 91 0 0 chr5 17233982 17234059 -182396091 + LTR32 LTR ERVL 12 88 -383 272 170 0 57 chr5 17234039 17234092 -182396058 + LTR32 LTR ERVL 15 64 -407 * 1153 132 21 32 chr5 17234106 17234295 -182395855 + LTR32 LTR ERVL 285 471 0 2195 125 23 0 chr5 17234339 17234644 -182395506 + AluSx SINE Alu 1 312 0 377 186 35 71 chr5 17234661 17234774 -182395376 - MER104 DNA Tc2 -66 114 6 929 246 56 59 chr5 17235427 17235818 -182394332 + LTR16A1 LTR ERVL 1 390 -67 231 36 0 0 chr5 17236051 17236079 -182394071 + (T)n Simple_repeat Simple_repeat 1 28 0 273 316 11 11 chr5 17236271 17236366 -182393784 + MIR SINE MIR 20 114 -148 291 226 69 29 chr5 17236441 17236543 -182393607 + L2 LINE L2 3208 3313 0 1166 118 0 0 chr5 17237145 17237306 -182392844 - AluSg/x SINE Alu -19 291 131 434 210 67 80 chr5 17237348 17237572 -182392578 + L2 LINE L2 3092 3312 -1 1755 108 82 38 chr5 17237643 17237758 -182392392 - MER44D DNA MER2_type -1891 600 492 1543 144 4 61 chr5 17237758 17238036 -182392114 - AluJo SINE Alu -14 298 37 1755 108 82 38 chr5 17238036 17238235 -182391915 - MER44D DNA MER2_type -1999 492 2 298 238 245 0 chr5 17238275 17238418 -182391732 - L2 LINE L2 -254 3059 2882 828 310 28 22 chr5 17238830 17239194 -182390956 - L2 LINE L2 -825 2489 2124 2238 112 0 10 chr5 17239700 17240012 -182390138 + AluSq SINE Alu 1 309 -4 280 324 120 13 chr5 17241106 17241489 -182388661 + L2 LINE L2 685 1108 -2206 228 371 21 14 chr5 17242172 17242315 -182387835 + L2 LINE L2 3122 3265 -7 2202 125 7 0 chr5 17242961 17243264 -182386886 + AluSx SINE Alu 1 305 -7 482 272 161 27 chr5 17244943 17245167 -182384983 - MIR SINE MIR -6 256 3 392 0 21 0 chr5 17245990 17246038 -182384112 + (CA)n Simple_repeat Simple_repeat 2 50 0 203 333 23 0 chr5 17246916 17247003 -182383147 - MIR SINE MIR -86 176 88 2479 139 45 17 chr5 17247923 17248327 -182381823 + MSTB LTR MaLR 1 415 -11 2198 98 30 7 chr5 17248473 17248769 -182381381 + AluSg SINE Alu 1 303 -7 334 340 6 19 chr5 17248947 17249109 -182381041 + L1ME4a LINE L1 4456 4615 -1531 501 293 84 73 chr5 17249274 17249732 -182380418 + L1ME4a LINE L1 5374 5844 -277 2438 93 0 0 chr5 17249732 17250033 -182380117 + AluSx SINE Alu 1 301 -11 501 293 84 73 chr5 17250033 17250221 -182379929 + L1ME4a LINE L1 5844 6028 -93 2227 101 3 3 chr5 17251646 17251934 -182378216 + AluSx SINE Alu 1 288 -24 1921 133 7 0 chr5 17252431 17252709 -182377441 - AluSx SINE Alu -32 280 1 1880 148 0 7 chr5 17253331 17253609 -182376541 - AluSx SINE Alu -36 276 1 229 356 28 34 chr5 17253639 17253816 -182376334 - MIR SINE MIR -30 232 57 191 244 0 0 chr5 17254571 17254612 -182375538 - L2 LINE L2 -19 3253 3213 2228 95 0 7 chr5 17255392 17255675 -182374475 + AluSq SINE Alu 1 281 -32 742 106 7 7 chr5 17255675 17255826 -182374324 + (TA)n Simple_repeat Simple_repeat 2 152 0 2012 128 3 33 chr5 17258266 17258571 -182371579 + AluSx SINE Alu 1 296 -16 15377 121 22 10 chr5 17261204 17263418 -182366732 + Tigger1 DNA MER2_type 58 2302 -116 1938 166 7 3 chr5 17263418 17263725 -182366425 - AluJo SINE Alu -4 308 1 15377 121 22 10 chr5 17263725 17263843 -182366307 + Tigger1 DNA MER2_type 2302 2417 -1 242 299 174 12 chr5 17264521 17264688 -182365462 - MER112 DNA MER1_type -35 225 32 319 349 105 33 chr5 17264779 17265330 -182364820 + L2 LINE L2 2242 2832 -482 258 143 0 0 chr5 17265572 17265614 -182364536 + L2 LINE L2 3265 3306 -7 299 235 53 46 chr5 17265717 17265894 -182364256 - MER112 DNA MER1_type 0 260 2 2133 144 0 6 chr5 17265966 17266279 -182363871 - AluSx SINE Alu -1 311 1 2318 96 0 0 chr5 17266602 17266895 -182363255 - AluSq SINE Alu -20 293 1 232 219 14 41 chr5 17266898 17266971 -182363179 - MIR SINE MIR -116 146 76 1326 77 6 0 chr5 17267687 17267856 -182362294 + MLT2A1 LTR ERVL 1 170 -274 203 333 23 0 chr5 17268469 17268556 -182361594 - MIR SINE MIR -86 176 88 2479 139 45 17 chr5 17269476 17269880 -182360270 + MSTB LTR MaLR 1 415 -11 2198 98 30 7 chr5 17270026 17270322 -182359828 + AluSg SINE Alu 1 303 -7 334 340 6 19 chr5 17270500 17270662 -182359488 + L1ME4a LINE L1 4456 4615 -1531 504 293 84 73 chr5 17270828 17271286 -182358864 + L1ME4a LINE L1 5374 5844 -277 2427 96 0 0 chr5 17271286 17271587 -182358563 + AluSx SINE Alu 1 301 -11 504 293 84 73 chr5 17271587 17271775 -182358375 + L1ME4a LINE L1 5844 6028 -93 2082 113 17 7 chr5 17273202 17273502 -182356648 + AluSx SINE Alu 1 303 -9 2049 113 14 0 chr5 17274341 17274616 -182355534 + AluSx SINE Alu 1 279 -33 391 0 0 0 chr5 17274616 17274658 -182355492 + LTR17 LTR ERV1 1 42 -738 2040 98 4 4 chr5 17274819 17275083 -182355067 - AluSq SINE Alu -49 264 1 329 193 211 26 chr5 17275452 17275566 -182354584 - AluJo SINE Alu -163 139 5 258 213 7 37 chr5 17275956 17276092 -182354058 + CT-rich Low_complexity Low_complexity 1 132 0 398 136 53 24 chr5 17276114 17276283 -182353867 + CT-rich Low_complexity Low_complexity 2 175 0 193 232 33 20 chr5 17276259 17276410 -182353740 + T-rich Low_complexity Low_complexity 5 157 0 * 372 73 0 18 chr5 17276474 17276529 -182353621 + MLT2A2 LTR ERVL 400 453 0 2194 132 0 0 chr5 17278055 17278358 -182351792 - AluSx SINE Alu -7 305 3 382 196 131 65 chr5 17279046 17279199 -182350951 - L1ME4a LINE L1 -3 6118 5956 900 97 0 0 chr5 17279428 17279542 -182350608 + AluJb SINE Alu 1 114 -198 6771 11 0 1 chr5 17279544 17280294 -182349856 + L1HS LINE L1 5407 6155 0 207 188 0 0 chr5 17280294 17280342 -182349808 + A-rich Low_complexity Low_complexity 1 48 0 892 170 31 6 chr5 17280343 17280502 -182349648 + AluJb SINE Alu 122 284 -28 2261 97 3 7 chr5 17281106 17281404 -182348746 - AluSq SINE Alu -16 297 1 216 67 0 0 chr5 17283063 17283093 -182347057 + (A)n Simple_repeat Simple_repeat 1 30 0 1020 113 113 87 chr5 17283463 17283693 -182346457 + MER31B LTR ERV1 1 236 -230 349 130 0 43 chr5 17283678 17283747 -182346403 + MER31B LTR ERV1 401 466 0 * 1593 187 0 4 chr5 17283936 17284198 -182345952 + AluJo SINE Alu 33 293 -19 217 245 235 20 chr5 17285161 17285259 -182344891 + L2 LINE L2 3137 3255 -17 1801 150 14 31 chr5 17285264 17285557 -182344593 + AluJo SINE Alu 1 288 -24 202 260 91 26 chr5 17287192 17287269 -182342881 + MIR3 SINE MIR 89 170 -38 21 0 0 0 chr5 17287916 17287937 -182342213 + AT_rich Low_complexity Low_complexity 1 21 0 1380 142 0 39 chr5 17288813 17289046 -182341104 + AluSg/x SINE Alu 86 309 0 2442 90 0 10 chr5 17289310 17289621 -182340529 + AluSq SINE Alu 1 308 -5 1736 181 0 0 chr5 17290535 17290846 -182339304 + AluJb SINE Alu 1 311 0 351 0 0 0 chr5 17290852 17290891 -182339259 + (CA)n Simple_repeat Simple_repeat 2 40 0 1788 156 125 51 chr5 17291304 17291735 -182338415 - MER31B LTR ERV1 -3 463 1 1790 158 10 10 chr5 17291767 17292064 -182338086 + AluJb SINE Alu 1 297 -15 1232 160 78 3 chr5 17293052 17293346 -182336804 + MER33 DNA MER1_type 5 320 -4 2324 60 42 0 chr5 17293715 17293998 -182336152 + AluY SINE Alu 1 295 -16 2189 124 0 10 chr5 17294595 17294902 -182335248 + AluSx SINE Alu 1 304 -8 2146 144 0 3 chr5 17296298 17296604 -182333546 - AluJb SINE Alu -7 305 1 328 242 11 22 chr5 17297420 17297511 -182332639 + MIR SINE MIR 108 197 -65 665 217 104 64 chr5 17297775 17298024 -182332126 + MLT1J2 LTR MaLR 21 279 -171 445 284 83 54 chr5 17298178 17298382 -182331768 - MIR SINE MIR -41 221 12 1251 163 75 3 chr5 17299556 17299851 -182330299 + MER33 DNA MER1_type 5 320 -4 2284 63 42 3 chr5 17300220 17300506 -182329644 + AluY SINE Alu 1 297 -14 411 38 0 0 chr5 17301807 17301860 -182328290 + (TG)n Simple_repeat Simple_repeat 1 53 0 437 213 46 0 chr5 17302142 17302250 -182327900 - MER81 DNA DNA -1 113 1 483 279 82 0 chr5 17305436 17305583 -182324567 + MIR SINE MIR 13 171 -91 2217 107 7 7 chr5 17305800 17306098 -182324052 + AluSx SINE Alu 1 298 -14 452 250 14 21 chr5 17306121 17306265 -182323885 + MIR SINE MIR 114 256 -6 15320 39 12 0 chr5 17306979 17309573 -182320577 + L1PA5 LINE L1 3552 6151 -3 947 55 0 23 chr5 17309574 17309702 -182320448 + L1PA4 LINE L1 6031 6155 0 29 28 0 0 chr5 17309702 17309738 -182320412 + AT_rich Low_complexity Low_complexity 1 36 0 1782 175 14 20 chr5 17312553 17312596 -182317554 - L1MB3 LINE L1 0 6183 6141 2178 137 0 0 chr5 17312596 17312896 -182317254 - AluSx SINE Alu -11 301 2 1782 175 14 20 chr5 17312896 17313207 -182316943 - L1MB3 LINE L1 -42 6141 5831 2092 151 3 0 chr5 17314471 17314776 -182315374 - AluSx SINE Alu -6 306 1 180 0 0 0 chr5 17314850 17314870 -182315280 + (A)n Simple_repeat Simple_repeat 1 20 0 30 0 0 0 chr5 17316649 17316679 -182313471 + AT_rich Low_complexity Low_complexity 1 30 0 2447 89 0 10 chr5 17317144 17317457 -182312693 - AluSq SINE Alu -3 310 1 1894 144 6 51 chr5 17318010 17318323 -182311827 + AluSx SINE Alu 1 299 -13 2035 116 14 0 chr5 17319161 17319436 -182310714 + AluSx SINE Alu 1 279 -33 4971 92 10 34 chr5 17319436 17320162 -182309988 + LTR17 LTR ERV1 1 708 -72 1285 77 0 12 chr5 17320244 17320414 -182309736 - LTR17 LTR ERV1 -612 168 1 1930 168 7 0 chr5 17323300 17323598 -182306552 + AluJo SINE Alu 1 300 -12 577 109 0 20 chr5 17323818 17323919 -182306231 - L1PA13 LINE L1 -5 6158 6060 1953 163 0 3 chr5 17324594 17324889 -182305261 + AluJb SINE Alu 1 294 -18 435 110 0 0 chr5 17324958 17325031 -182305119 - AluSp/q SINE Alu -6 307 235 1665 131 55 70 chr5 17325698 17326010 -182304140 + AluJo SINE Alu 1 307 -5 206 360 93 22 chr5 17326099 17326421 -182303729 + L2 LINE L2 2560 2904 -410 288 310 108 8 chr5 17326597 17326726 -182303424 + L2 LINE L2 3172 3313 0 228 67 0 0 chr5 17327131 17327161 -182302989 + (A)n Simple_repeat Simple_repeat 1 30 0 607 128 4 25 chr5 17327333 17327570 -182302580 + AluJ SINE Alu 1 312 0 263 247 104 0 chr5 17327712 17327789 -182302361 - MIR SINE MIR -113 149 65 2266 105 16 10 chr5 17328673 17328977 -182301173 + AluSq SINE Alu 2 307 -6 390 245 93 0 chr5 17329257 17329396 -182300754 + L1ME2 LINE L1 5648 5799 -322 1200 108 154 0 chr5 17329445 17329640 -182300510 - L1PB2 LINE L1 -2 6149 5925 2052 123 0 3 chr5 17329735 17330072 -182300078 + AluSg SINE Alu 2 310 0 1928 177 67 10 chr5 17330310 17330700 -182299450 - L1MB4 LINE L1 0 6180 5769 604 181 78 42 chr5 17330944 17331110 -182299040 + L1ME2 LINE L1 5963 6134 -30 2018 102 15 74 chr5 17332052 17332377 -182297773 - AluSx SINE Alu -6 306 1 2203 120 7 0 chr5 17333253 17333553 -182296597 + AluSq SINE Alu 1 302 -11 21 0 0 0 chr5 17334513 17334534 -182295616 + AT_rich Low_complexity Low_complexity 1 21 0 1744 177 10 0 chr5 17335232 17335531 -182294619 + AluJo SINE Alu 1 302 -10 209 316 10 20 chr5 17336148 17336246 -182293904 + (CATA)n Simple_repeat Simple_repeat 4 100 0 * 363 252 114 76 chr5 17336235 17336278 -182293872 + L1ME4a LINE L1 5902 5942 -179 2317 87 3 0 chr5 17336278 17336566 -182293584 + AluSp SINE Alu 1 289 -24 31 26 0 0 chr5 17336566 17336604 -182293546 + AT_rich Low_complexity Low_complexity 1 38 0 363 252 114 76 chr5 17336604 17336732 -182293418 + L1ME4a LINE L1 5941 6119 -2 1809 84 4 0 chr5 17337365 17337604 -182292546 - AluSq SINE Alu -72 241 2 1801 132 55 0 chr5 17338189 17338478 -182291672 + AluJb SINE Alu 1 305 -7 331 240 0 37 chr5 17338571 17338717 -182291433 + MIR SINE MIR 49 260 -2 2384 15 0 0 chr5 17338854 17339122 -182291028 - AluYb8 SINE Alu -14 304 37 1830 124 3 58 chr5 17339678 17340008 -182290142 - AluSx SINE Alu 0 312 1 651 79 0 264 chr5 17340008 17340186 -182289964 - AluJo/FLAM SINE Alu -171 131 1 336 175 0 0 chr5 17342058 17342121 -182288029 + A-rich Low_complexity Low_complexity 1 63 0 33 80 0 0 chr5 17342818 17342893 -182287257 + GC_rich Low_complexity Low_complexity 1 75 0 198 0 0 0 chr5 17343200 17343222 -182286928 + (CCG)n Simple_repeat Simple_repeat 2 23 0 203 213 27 40 chr5 17343232 17343307 -182286843 + G-rich Low_complexity Low_complexity 1 74 0 31 107 0 0 chr5 17343344 17343466 -182286684 + GC_rich Low_complexity Low_complexity 1 122 0 705 179 179 0 chr5 17344270 17344421 -182285729 + MER45A DNA AcHobo 1 178 0 837 132 62 7 chr5 17344645 17344810 -182285340 + AluY SINE Alu 136 308 0 26 30 0 0 chr5 17345625 17345658 -182284492 + AT_rich Low_complexity Low_complexity 1 33 0 182 36 0 36 chr5 17346138 17346166 -182283984 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1964 118 0 20 chr5 17346168 17346465 -182283685 - AluSq SINE Alu -20 293 3 313 232 99 49 chr5 17346699 17346841 -182283309 + L1ME4a LINE L1 5956 6104 -17 23 33 0 0 chr5 17346841 17346871 -182283279 + AT_rich Low_complexity Low_complexity 1 30 0 660 237 147 30 chr5 17347907 17348055 -182282095 + L1MC4a LINE L1 5807 5936 -1872 315 0 0 0 chr5 17348055 17348090 -182282060 + (TG)n Simple_repeat Simple_repeat 1 35 0 660 237 147 30 chr5 17348090 17348274 -182281876 + L1MC4a LINE L1 5936 6178 -1630 21 0 0 0 chr5 17348875 17348896 -182281254 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 17349383 17349407 -182280743 + (A)n Simple_repeat Simple_repeat 1 24 0 3568 134 13 19 chr5 17349643 17349825 -182280325 + MER1A DNA MER1_type 2 184 -2516 2345 80 0 0 chr5 17349825 17350125 -182280025 - AluSc SINE Alu -9 300 1 3568 134 13 19 chr5 17350125 17350471 -182279679 + MER1A DNA MER1_type 184 527 0 192 40 0 0 chr5 17350584 17350609 -182279541 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 894 141 0 0 chr5 17350612 17350754 -182279396 - AluSg/x SINE Alu -39 273 132 841 147 0 37 chr5 17350970 17351106 -182279044 + AluJo SINE Alu 1 131 -171 368 269 90 22 chr5 17351194 17351328 -182278822 - MIR SINE MIR -17 245 103 264 313 0 0 chr5 17351347 17351414 -182278736 - L3 LINE CR1 -3 1574 1508 839 220 0 0 chr5 17351439 17351607 -182278543 + AluJo SINE Alu 137 304 -8 267 182 30 15 chr5 17352219 17352285 -182277865 - MLT1K LTR MaLR -339 249 183 298 274 36 0 chr5 17352595 17352679 -182277471 - MLT1D LTR MaLR -418 87 1 821 129 41 18 chr5 17352679 17352705 -182277445 - Charlie5 DNA MER1_type -55 2569 2545 2270 97 0 0 chr5 17352705 17353014 -182277136 + AluSg SINE Alu 1 309 -1 821 129 41 18 chr5 17353014 17353157 -182276993 - Charlie5 DNA MER1_type -79 2545 2396 284 200 147 0 chr5 17353889 17353964 -182276186 - MLT1K LTR MaLR -320 268 183 2430 98 48 25 chr5 17354747 17355103 -182275047 + THE1B LTR MaLR 1 364 0 192 273 36 0 chr5 17355830 17355885 -182274265 - MIR SINE MIR -27 235 179 * 716 226 177 16 chr5 17355872 17356115 -182274035 - L2 LINE L2 -2 3311 3030 1578 287 136 19 chr5 17356215 17356993 -182273157 - L2 LINE L2 -550 2764 1896 181 209 23 0 chr5 17356992 17357035 -182273115 - MIR SINE MIR -82 180 137 * 2125 101 9 22 chr5 17357045 17357361 -182272789 - AluSx SINE Alu 0 312 1 359 309 0 137 chr5 17357361 17357422 -182272728 - MIR SINE MIR -62 146 78 3746 149 17 46 chr5 17357422 17357975 -182272175 + L1MA8 LINE L1 5568 6135 -156 2083 102 7 7 chr5 17357975 17358270 -182271880 + AluY SINE Alu 1 295 -16 3746 149 17 46 chr5 17358270 17358335 -182271815 + L1MA8 LINE L1 6135 6200 -91 1934 144 0 0 chr5 17358335 17358626 -182271524 - AluSx SINE Alu -21 291 1 3746 149 17 46 chr5 17358626 17358712 -182271438 + L1MA8 LINE L1 6200 6253 -38 2282 72 0 3 chr5 17358712 17359004 -182271146 - AluY SINE Alu -20 291 1 3746 149 17 46 chr5 17359004 17359042 -182271108 + L1MA8 LINE L1 6253 6291 0 359 309 0 137 chr5 17359042 17359150 -182271000 - MIR SINE MIR -130 78 5 1457 171 61 11 chr5 17359901 17360181 -182269969 - AluJb SINE Alu -15 297 4 1121 261 68 30 chr5 17360205 17360631 -182269519 - MLT1C LTR MaLR -3 464 23 285 256 143 57 chr5 17360908 17361138 -182269012 + MIR SINE MIR 6 255 -7 198 0 0 0 chr5 17361871 17361893 -182268257 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 503 291 146 0 chr5 17362208 17362366 -182267784 - MER5A DNA MER1_type 0 189 9 2125 124 13 0 chr5 17362488 17362794 -182267356 - AluSx SINE Alu -2 310 1 1883 154 55 19 chr5 17363135 17363460 -182266690 + MER1B DNA MER1_type 1 337 0 300 316 92 40 chr5 17363697 17363871 -182266279 - MIR SINE MIR -70 192 10 2079 106 0 0 chr5 17364070 17364383 -182265767 + AluSx SINE Alu 1 313 0 1625 86 5 5 chr5 17364494 17364747 -182265403 + AluSq SINE Alu 64 316 0 1768 190 16 25 chr5 17365203 17365414 -182264736 - MLT1A1 LTR MaLR 0 365 157 2139 110 3 0 chr5 17365414 17365714 -182264436 - AluSq SINE Alu -12 301 1 1768 190 16 25 chr5 17365714 17365870 -182264280 - MLT1A1 LTR MaLR -208 157 1 1953 131 10 0 chr5 17366478 17366769 -182263381 + AluSq SINE Alu 1 294 -19 384 77 0 0 chr5 17367240 17367292 -182262858 + (TA)n Simple_repeat Simple_repeat 2 53 0 1858 117 43 0 chr5 17367292 17367573 -182262577 - AluSg SINE Alu -17 293 1 246 148 37 19 chr5 17367574 17367628 -182262522 - Alu SINE Alu 0 308 254 949 246 86 0 chr5 17367696 17367928 -182262222 + MIR SINE MIR 8 259 -3 819 198 113 35 chr5 17368039 17368296 -182261854 - LTR19C LTR ERV1 -13 766 490 * 1464 199 24 95 chr5 17368278 17368410 -182261740 - LTR9 LTR ERV1 -221 391 251 2028 95 3 3 chr5 17368410 17368706 -182261444 - AluSx SINE Alu -16 296 1 1464 199 24 95 chr5 17368706 17368925 -182261225 - LTR9 LTR ERV1 -361 251 72 1941 96 10 14 chr5 17368925 17369218 -182260932 + AluSx SINE Alu 1 292 -20 1464 199 24 95 chr5 17369218 17369286 -182260864 - LTR9 LTR ERV1 -540 72 1 425 276 5 95 chr5 17369518 17369728 -182260422 + L1ME3A LINE L1 5704 5894 -276 1981 118 14 0 chr5 17369823 17370111 -182260039 + AluSx SINE Alu 3 294 -18 524 268 196 30 chr5 17370292 17370337 -182259813 - L1ME4a LINE L1 -11 6110 6074 2070 96 7 16 chr5 17370337 17370640 -182259510 - AluY SINE Alu -3 308 9 3525 62 0 17 chr5 17370648 17371112 -182259038 - L1PA7 LINE L1 -1 6153 5698 2118 115 0 31 chr5 17371120 17371443 -182258707 + AluSq SINE Alu 1 313 0 524 268 196 30 chr5 17371443 17371782 -182258368 - L1ME4a LINE L1 -57 6064 5641 192 125 47 0 chr5 17371805 17371869 -182258281 + (TA)n Simple_repeat Simple_repeat 1 67 0 413 214 14 93 chr5 17371870 17372010 -182258140 - L1ME LINE L1 -446 5675 5547 412 280 28 156 chr5 17372850 17373311 -182256839 + L2 LINE L2 2871 3272 0 26 0 0 0 chr5 17373382 17373408 -182256742 + AT_rich Low_complexity Low_complexity 1 26 0 2287 79 3 0 chr5 17373462 17373753 -182256397 - AluSg1 SINE Alu -17 292 1 190 156 250 0 chr5 17373775 17373839 -182256311 + MIR SINE MIR 72 151 -111 189 296 0 0 chr5 17375411 17375455 -182254695 + L2 LINE L2 3191 3234 -79 2308 86 3 6 chr5 17375591 17375905 -182254245 - AluSp SINE Alu 0 313 1 2907 132 5 2 chr5 17378313 17378739 -182251411 + MSTA LTR MaLR 2 428 0 2126 93 0 4 chr5 17378771 17379050 -182251100 + AluSq SINE Alu 19 296 -17 198 0 0 0 chr5 17379513 17379535 -182250615 + (TA)n Simple_repeat Simple_repeat 2 23 0 2000 119 7 0 chr5 17379551 17379845 -182250305 - AluSg SINE Alu -14 296 1 263 189 38 0 chr5 17380478 17380531 -182249619 + Tigger5 DNA MER2_type 1 55 -2268 293 165 0 165 chr5 17380541 17380644 -182249506 + Tigger5 DNA MER2_type 2237 2322 -1 366 183 0 0 chr5 17380659 17380730 -182249420 + (TG)n Simple_repeat Simple_repeat 2 72 0 1097 228 57 15 chr5 17380743 17381006 -182249144 - MLT2D LTR ERVL -50 364 91 577 185 20 80 chr5 17381078 17381229 -182248921 - MER103 DNA DNA -22 144 3 1984 76 0 0 chr5 17381724 17381974 -182248176 - AluY SINE Alu -12 299 50 597 75 0 12 chr5 17382140 17382220 -182247930 - MADE1 DNA Mariner -1 79 1 1986 147 39 52 chr5 17382668 17382711 -182247439 - MER57A LTR ERV1 0 403 361 1874 121 4 4 chr5 17382711 17382991 -182247159 + AluJb SINE Alu 1 280 -32 180 0 0 0 chr5 17382992 17383012 -182247138 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1986 147 39 52 chr5 17383012 17383374 -182246776 - MER57A LTR ERV1 -41 362 1 1984 115 11 0 chr5 17384407 17384694 -182245456 - AluSx SINE Alu -22 290 1 554 267 16 37 chr5 17385155 17385346 -182244804 + LTR33 LTR ERVL 1 187 -334 198 0 0 0 chr5 17385354 17385376 -182244774 + (T)n Simple_repeat Simple_repeat 1 22 0 1922 85 4 0 chr5 17385466 17385725 -182244425 - AluSp SINE Alu -53 260 1 4148 117 13 13 chr5 17385780 17386413 -182243737 + MER51A LTR ERV1 1 633 -1 680 286 65 13 chr5 17386928 17387159 -182242991 - MIR SINE MIR 0 262 20 653 273 157 0 chr5 17387912 17388128 -182242022 + MIR SINE MIR 13 262 0 194 254 0 84 chr5 17388149 17388175 -182241975 - MIR SINE MIR -86 122 95 2207 158 30 25 chr5 17388175 17388537 -182241613 + THE1B LTR MaLR 1 364 0 194 254 0 84 chr5 17388537 17388581 -182241569 - MIR SINE MIR -113 95 58 236 299 11 58 chr5 17388897 17388984 -182241166 + L2 LINE L2 3230 3312 -1 234 357 49 21 chr5 17389386 17389529 -182240621 - L2 LINE L2 -671 2643 2497 180 77 0 0 chr5 17389823 17389849 -182240301 + (TC)n Simple_repeat Simple_repeat 1 26 0 1094 33 22 44 chr5 17390798 17390981 -182239169 + (TCTA)n Simple_repeat Simple_repeat 1 179 0 862 219 0 0 chr5 17391003 17391149 -182239001 - FRAM SINE Alu -30 146 1 737 236 64 55 chr5 17391265 17391581 -182238569 + MER39 LTR ERV1 1 533 -174 1348 136 84 1 chr5 17391604 17392009 -182238141 - LTR54 LTR ERV1 -5 505 10 700 189 8 0 chr5 17392029 17392161 -182237989 + MER39 LTR ERV1 553 685 -22 3637 149 18 43 chr5 17392237 17392577 -182237573 + MER39B LTR ERV1 1 317 -336 2038 143 10 0 chr5 17392577 17392884 -182237266 + AluSx SINE Alu 1 310 -2 3637 149 18 43 chr5 17392884 17393209 -182236941 + MER39B LTR ERV1 317 649 -4 2274 90 7 0 chr5 17393293 17393592 -182236558 + AluSx SINE Alu 12 312 0 2099 137 0 0 chr5 17394697 17394989 -182235161 - AluSx SINE Alu -8 304 13 302 365 34 17 chr5 17395245 17395423 -182234727 - L1MC4a LINE L1 -1836 5972 5792 1219 176 70 19 chr5 17395603 17395916 -182234234 + L1MC4a LINE L1 6163 6491 -1317 1500 183 3 24 chr5 17396007 17396431 -182233719 - AluJo SINE Alu 0 418 1 288 280 43 11 chr5 17397902 17397995 -182232155 - MIR3 SINE MIR -3 205 110 2020 110 0 18 chr5 17398054 17398335 -182231815 - AluSx SINE Alu -36 276 1 1977 141 0 3 chr5 17399340 17399631 -182230519 - AluSx SINE Alu -18 294 5 2149 90 38 3 chr5 17399772 17400061 -182230089 + AluSc SINE Alu 1 299 -10 1743 163 3 29 chr5 17400091 17400397 -182229753 + AluJo SINE Alu 1 298 -14 207 0 0 0 chr5 17400604 17400627 -182229523 + (TA)n Simple_repeat Simple_repeat 1 23 0 2488 161 91 106 chr5 17400629 17401585 -182228565 + MER21A LTR ERV1 26 924 -7 2306 92 0 3 chr5 17401719 17402012 -182228138 - AluSx SINE Alu -20 292 1 1693 101 20 2 chr5 17402261 17402575 -182227575 + MER51B LTR ERV1 1 377 0 234 326 93 88 chr5 17402577 17402636 -182227514 + MIR SINE MIR 69 126 -136 2237 118 0 13 chr5 17402636 17402950 -182227200 - AluSx SINE Alu 0 312 3 234 326 93 88 chr5 17402950 17403083 -182227067 + MIR SINE MIR 126 262 0 2415 48 3 29 chr5 17403205 17403516 -182226634 + AluY SINE Alu 1 303 -8 2424 97 0 0 chr5 17403546 17403854 -182226296 - AluSq SINE Alu -5 308 1 1504 172 24 31 chr5 17403935 17404225 -182225925 + AluJo SINE Alu 5 292 -20 2309 107 0 0 chr5 17404284 17404584 -182225566 - AluSg1 SINE Alu -9 300 1 300 300 0 0 chr5 17404671 17404751 -182225399 - L1MC/D LINE L1 -2024 5784 5705 2924 186 36 42 chr5 17404852 17405491 -182224659 + L1MB5 LINE L1 5527 6161 -13 1641 141 116 0 chr5 17406158 17406435 -182223715 + AluJb SINE Alu 1 309 -3 3784 185 24 10 chr5 17406616 17407331 -182222819 - L1MB5 LINE L1 -8 6166 5442 4251 209 44 59 chr5 17407339 17408652 -182221498 - L1MB5 LINE L1 -755 5391 4099 252 246 33 0 chr5 17408651 17408712 -182221438 + L1MB5 LINE L1 4068 4130 -2016 * 2267 120 0 0 chr5 17409602 17409903 -182220247 + AluSx SINE Alu 1 301 -11 618 219 39 16 chr5 17410091 17410219 -182219931 + MER94 DNA DNA 4 134 0 2210 96 7 0 chr5 17410244 17410537 -182219613 - AluSq SINE Alu -16 297 3 213 289 122 33 chr5 17411582 17411769 -182218381 + MIR SINE MIR 41 241 -21 2353 88 3 0 chr5 17411967 17412263 -182217887 - AluSq SINE Alu -16 297 1 262 301 43 11 chr5 17412634 17412727 -182217423 - MLT1L LTR MaLR -366 249 154 934 122 27 7 chr5 17413712 17413859 -182216291 - L1MA9 LINE L1 -377 5935 5786 1508 134 30 0 chr5 17413859 17414090 -182216060 - Tigger3(Golem) DNA MER2_type -1 3028 2791 2274 100 7 3 chr5 17414360 17414660 -182215490 - AluSx SINE Alu -11 301 1 23 0 0 0 chr5 17414801 17414824 -182215326 + AT_rich Low_complexity Low_complexity 1 23 0 304 272 19 58 chr5 17416806 17416909 -182213241 + L2 LINE L2 3191 3289 -24 229 386 35 7 chr5 17417614 17417759 -182212391 - MIR3 SINE MIR -2 206 58 2894 239 72 27 chr5 17418446 17419374 -182210776 - L1ME3A LINE L1 -5 6234 5265 369 109 0 0 chr5 17419375 17419430 -182210720 + (TCCCC)n Simple_repeat Simple_repeat 4 58 0 1824 175 7 0 chr5 17419457 17419760 -182210390 - AluJb SINE Alu -7 305 1 756 273 75 47 chr5 17419760 17420254 -182209896 - L1ME3A LINE L1 -948 5267 4760 653 256 80 64 chr5 17420458 17420770 -182209380 - L1ME3A LINE L1 -1980 4235 3919 914 173 0 84 chr5 17420787 17420989 -182209161 - MLT1A1 LTR MaLR -46 319 135 316 288 16 40 chr5 17420997 17421122 -182209028 - L1ME3A LINE L1 -2301 3914 3793 2579 189 53 4 chr5 17421122 17421634 -182208516 - MER90 LTR ERV1 0 614 78 2092 142 9 15 chr5 17421626 17421951 -182208199 + MER1B DNA MER1_type 17 339 0 * 1130 169 25 158 chr5 17421994 17422356 -182207794 + MER31B LTR ERV1 1 314 -152 318 286 139 61 chr5 17422359 17422653 -182207497 - L1ME3A LINE L1 -4205 2191 1875 2246 120 3 0 chr5 17423111 17423411 -182206739 - AluSx SINE Alu -11 301 1 1779 153 133 36 chr5 17425212 17425572 -182204578 - MLT2C1 LTR ERVL -1 396 2 32 0 0 0 chr5 17426087 17426119 -182204031 + AT_rich Low_complexity Low_complexity 1 32 0 1711 154 7 18 chr5 17426126 17426405 -182203745 - AluJo SINE Alu -36 276 1 2589 148 54 5 chr5 17427542 17427947 -182202203 - MSTB LTR MaLR -1 425 1 2226 122 3 0 chr5 17428162 17428466 -182201684 - AluSg SINE Alu -5 305 1 379 209 23 17 chr5 17428638 17428815 -182201335 + (CCTAT)n Simple_repeat Simple_repeat 3 180 0 342 0 0 0 chr5 17429077 17429115 -182201035 + (TG)n Simple_repeat Simple_repeat 2 39 0 993 169 47 0 chr5 17432780 17432952 -182197198 - MER5A DNA MER1_type -7 182 3 249 325 189 18 chr5 17432952 17433577 -182196573 + L2 LINE L2 1777 2509 -805 2179 89 7 20 chr5 17433735 17434039 -182196111 - AluY SINE Alu -11 300 1 1051 167 0 0 chr5 17434153 17434315 -182195835 - AluJ SINE Alu -10 302 141 842 149 6 50 chr5 17434416 17434577 -182195573 - AluJ SINE Alu -158 154 1 218 222 32 16 chr5 17434605 17434668 -182195482 - MIR SINE MIR -95 167 104 656 207 76 0 chr5 17434977 17435122 -182195028 - L1MD2 LINE L1 -10 6349 6194 1320 185 63 15 chr5 17435128 17435398 -182194752 - L1MD2 LINE L1 -218 6141 5859 277 123 35 18 chr5 17435397 17435454 -182194696 - L1MDa LINE L1 -3918 2622 2565 * 6064 209 76 36 chr5 17435450 17435477 -182194673 - L1MDa LINE L1 -4781 1759 1735 2104 119 0 13 chr5 17435477 17435495 -182194655 - AluSx SINE Alu -6 306 289 210 71 0 0 chr5 17435495 17435523 -182194627 + (TATG)n Simple_repeat Simple_repeat 2 29 0 2104 119 0 13 chr5 17435523 17435814 -182194336 - AluSx SINE Alu -23 289 1 6064 209 76 36 chr5 17435814 17436116 -182194034 - L1MDa LINE L1 -4805 1735 1447 1462 122 0 0 chr5 17436116 17436312 -182193838 - AluSx SINE Alu -116 196 1 6064 209 76 36 chr5 17436312 17437345 -182192805 - L1MDa LINE L1 -5093 1447 318 2315 109 0 6 chr5 17437345 17437658 -182192492 - AluSx SINE Alu -1 311 1 6064 209 76 36 chr5 17437658 17437916 -182192234 - L1MDa LINE L1 -6222 318 72 257 292 14 0 chr5 17438286 17438358 -182191792 + L2 LINE L2 2588 2660 -654 224 374 71 24 chr5 17438487 17438698 -182191452 + L2 LINE L2 2829 3049 -223 645 283 150 4 chr5 17438819 17439045 -182191105 + MIR SINE MIR 3 261 -1 1219 206 42 8 chr5 17439646 17439907 -182190243 - MLT1A1 LTR MaLR -2 363 94 1576 136 68 106 chr5 17439907 17440190 -182189960 + MER47A DNA MER2_type 1 268 -2055 1841 151 0 7 chr5 17440190 17440462 -182189688 - AluSx SINE Alu -22 290 21 1576 136 68 106 chr5 17440462 17440545 -182189605 + MER47A DNA MER2_type 268 353 -13 445 141 54 43 chr5 17440555 17440647 -182189503 - MLT1A1 LTR MaLR -279 95 3 917 176 7 0 chr5 17440689 17440842 -182189308 - L1PB4 LINE L1 -5 6151 5998 1574 132 143 0 chr5 17441236 17441487 -182188663 - AluSx SINE Alu -24 288 2 236 116 47 0 chr5 17441730 17441773 -182188377 + L2 LINE L2 2935 2979 -334 217 254 60 15 chr5 17441770 17441837 -182188313 - L2 LINE L2 -370 2944 2875 * 1872 163 6 10 chr5 17442075 17442388 -182187762 + AluJo SINE Alu 1 312 0 798 221 60 45 chr5 17442635 17442935 -182187215 + MLT1J2 LTR MaLR 64 367 -42 489 283 177 0 chr5 17443022 17443220 -182186930 + MIR SINE MIR 7 239 -23 423 221 66 37 chr5 17443500 17443636 -182186514 + MLT1G LTR MaLR 56 195 -372 1686 187 7 14 chr5 17443671 17443955 -182186195 - AluJo SINE Alu -30 282 1 833 248 0 0 chr5 17443963 17444120 -182186030 - FRAM SINE Alu -18 158 2 588 264 203 5 chr5 17444174 17444386 -182185764 + MLT1G LTR MaLR 251 504 -86 1590 247 84 40 chr5 17444386 17444909 -182185241 + L1ME3A LINE L1 5391 5936 -234 674 259 32 48 chr5 17445015 17445266 -182184884 + L1ME3A LINE L1 5924 6170 0 366 263 21 0 chr5 17445334 17445429 -182184721 + MLT1G LTR MaLR 499 595 0 277 324 45 36 chr5 17445541 17445652 -182184498 + L2 LINE L2 3155 3266 -6 2351 94 3 0 chr5 17446047 17446344 -182183806 - AluSx SINE Alu -14 298 1 431 319 64 43 chr5 17446515 17446703 -182183447 + MIR3 SINE MIR 14 205 -3 1956 143 14 3 chr5 17446763 17447057 -182183093 - AluSq SINE Alu -16 297 1 2471 154 73 0 chr5 17448991 17449387 -182180763 - MSTB LTR MaLR 0 426 2 289 265 12 12 chr5 17449459 17449542 -182180608 + MIR SINE MIR 172 254 -8 260 226 54 54 chr5 17449633 17449726 -182180424 - MLT1H LTR MaLR 0 549 457 241 218 18 0 chr5 17449911 17449966 -182180184 - MLT1H LTR MaLR -199 350 295 465 244 148 0 chr5 17450028 17450163 -182179987 - MLT1H LTR MaLR -394 155 1 1213 254 81 73 chr5 17450570 17451074 -182179076 + MLT1K LTR MaLR 67 574 -14 298 311 175 39 chr5 17451915 17452224 -182177926 + L2 LINE L2 2921 3271 -1 2232 124 16 59 chr5 17452350 17452703 -182177447 - MER4D LTR ERV1 0 872 536 1685 112 16 8 chr5 17452703 17452961 -182177189 + AluSq SINE Alu 54 313 0 2232 124 16 59 chr5 17452961 17452995 -182177155 - MER4D LTR ERV1 -336 536 502 2124 88 56 7 chr5 17452994 17453300 -182176850 - MER4D LTR ERV1 -551 321 1 * 5072 135 58 15 chr5 17453552 17454410 -182175740 + MER4D LTR ERV1 1 895 -8 583 110 9 46 chr5 17455305 17455414 -182174736 + L1MA4 LINE L1 6196 6300 0 1111 224 56 14 chr5 17455777 17456063 -182174087 - LTR16C LTR ERVL 0 491 194 3101 227 19 9 chr5 17456267 17456914 -182173236 + MER82 DNA MER2_type 1 653 0 2398 88 3 0 chr5 17456916 17457213 -182172937 - AluSq SINE Alu -13 300 3 1861 98 0 0 chr5 17457741 17457985 -182172165 + AluSq SINE Alu 52 295 -18 1906 128 17 27 chr5 17458148 17458482 -182171668 + AluSx SINE Alu 1 312 0 764 243 23 18 chr5 17458764 17458982 -182171168 - L2 LINE L2 -1 3312 3094 265 313 98 40 chr5 17459179 17459527 -182170623 + LTR16C LTR ERVL 122 489 -2 1623 141 0 104 chr5 17459578 17459925 -182170225 + AluY SINE Alu 1 311 0 291 281 83 8 chr5 17460055 17460176 -182169974 - L2 LINE L2 -428 2886 2757 185 195 24 0 chr5 17460439 17460480 -182169670 - L2 LINE L2 -1 3312 3271 1099 120 29 17 chr5 17460541 17460716 -182169434 - L1MB4 LINE L1 0 6180 6004 1655 196 62 57 chr5 17460729 17461148 -182169002 + MER31B LTR ERV1 1 421 -45 3739 172 32 15 chr5 17461187 17461254 -182168896 - L1MB4 LINE L1 -190 5990 5926 1930 199 37 0 chr5 17461254 17461606 -182168544 - MLT1A1 LTR MaLR 0 365 1 3739 172 32 15 chr5 17461606 17462279 -182167871 - L1MB4 LINE L1 -254 5926 5240 1513 223 105 50 chr5 17462296 17462781 -182167369 + MLT2B1 LTR ERVL 1 512 -8 1693 145 0 0 chr5 17463068 17463310 -182166840 - AluSq SINE Alu -71 242 1 371 186 356 17 chr5 17463527 17463645 -182166505 + MER5A DNA MER1_type 32 189 0 4084 120 62 74 chr5 17463669 17465060 -182165090 - pTR5 LTR ERV1 0 2438 66 334 336 25 17 chr5 17465093 17465212 -182164938 - MIR3 SINE MIR -5 203 84 266 255 112 20 chr5 17465306 17465404 -182164746 - MIR3 SINE MIR -11 197 91 780 281 33 83 chr5 17465421 17465483 -182164667 - MLT1I LTR MaLR -3 406 342 2154 105 3 11 chr5 17465483 17465796 -182164354 - AluSx SINE Alu 0 311 1 780 281 33 83 chr5 17465796 17466091 -182164059 - MLT1I LTR MaLR -67 342 66 569 217 169 63 chr5 17466091 17466280 -182163870 + MER63A DNA MER1_type 1 209 -1 2139 114 20 0 chr5 17466344 17466642 -182163508 + AluSx SINE Alu 3 306 -6 25 0 0 0 chr5 17467222 17467247 -182162903 + AT_rich Low_complexity Low_complexity 1 25 0 1917 169 0 3 chr5 17467247 17467555 -182162595 - AluJo SINE Alu -5 307 1 893 260 31 35 chr5 17468090 17468344 -182161806 - MIR SINE MIR -2 260 8 240 305 61 53 chr5 17468696 17468827 -182161323 - L3 LINE CR1 -251 1326 1195 526 244 15 37 chr5 17469793 17469928 -182160222 - MER94 DNA DNA -2 132 1 468 328 101 4 chr5 17470660 17470898 -182159252 + MIR SINE MIR 2 262 0 1590 90 11 93 chr5 17471127 17471395 -182158755 + L1MA5 LINE L1 6053 6298 -2 283 95 0 0 chr5 17471438 17471480 -182158670 - AluSx SINE Alu -4 304 263 1688 96 0 0 chr5 17471481 17471690 -182158460 - AluSx SINE Alu -93 219 11 264 351 23 15 chr5 17472294 17472425 -182157725 - MIR SINE MIR -128 134 3 272 75 25 0 chr5 17472893 17472933 -182157217 + MADE1 DNA Mariner 40 80 0 371 268 62 39 chr5 17474554 17474733 -182155417 - MIR SINE MIR -14 248 66 568 298 19 29 chr5 17474860 17475068 -182155082 + MIR SINE MIR 2 207 -55 25 83 0 0 chr5 17475097 17475157 -182154993 + AT_rich Low_complexity Low_complexity 1 60 0 2083 135 7 0 chr5 17475744 17476040 -182154110 - AluSx SINE Alu -14 298 1 256 324 18 36 chr5 17476115 17476226 -182153924 + L2 LINE L2 2660 2768 -546 322 316 86 48 chr5 17476261 17476470 -182153680 + L2 LINE L2 2757 2973 -341 786 218 12 18 chr5 17476506 17476676 -182153474 + MER5B DNA MER1_type 7 175 -3 618 344 39 23 chr5 17476676 17476933 -182153217 + L2 LINE L2 3011 3271 -1 222 88 18 35 chr5 17480165 17480222 -182149928 + (TA)n Simple_repeat Simple_repeat 1 56 0 470 300 64 55 chr5 17480228 17480448 -182149702 - MIR SINE MIR -28 234 13 201 74 0 0 chr5 17480593 17480620 -182149530 + (TAA)n Simple_repeat Simple_repeat 3 29 0 1624 194 105 25 chr5 17481273 17481462 -182148688 - MLT1B LTR MaLR 0 390 218 2095 141 0 3 chr5 17481462 17481766 -182148384 - AluSx SINE Alu -9 303 1 1624 194 105 25 chr5 17481766 17481937 -182148213 - MLT1B LTR MaLR -172 218 1 235 313 113 9 chr5 17482300 17482415 -182147735 - L2 LINE L2 -9 3263 3137 2820 158 41 6 chr5 17482807 17483275 -182146875 - MER31A LTR ERV1 0 485 2 2188 99 0 40 chr5 17483322 17483644 -182146506 + AluSc SINE Alu 1 309 0 318 411 8 0 chr5 17483748 17483872 -182146278 - L2 LINE L2 -3 3269 3145 25 31 0 0 chr5 17484611 17484643 -182145507 + AT_rich Low_complexity Low_complexity 1 32 0 734 168 0 9 chr5 17484810 17484923 -182145227 + FLAM_A SINE Alu 6 117 -25 449 268 89 56 chr5 17485064 17485277 -182144873 + MIR SINE MIR 4 223 -39 2312 91 3 10 chr5 17485772 17486081 -182144069 - AluSq SINE Alu -6 307 1 432 329 13 0 chr5 17486305 17486460 -182143690 - MLT1K LTR MaLR -8 580 424 613 143 0 38 chr5 17486670 17486775 -182143375 - MER45C DNA AcHobo 0 953 853 1180 78 0 0 chr5 17486778 17486919 -182143231 + AluSp/q SINE Alu 156 296 -17 1735 254 88 70 chr5 17486919 17486945 -182143205 - MER45C DNA AcHobo -716 865 841 345 47 0 0 chr5 17486945 17486988 -182143162 + (TA)n Simple_repeat Simple_repeat 2 44 0 1735 254 88 70 chr5 17486988 17487269 -182142881 - MER45C DNA AcHobo -740 841 566 2534 128 26 0 chr5 17487269 17487621 -182142529 - THE1B LTR MaLR -3 361 1 1735 254 88 70 chr5 17487621 17488110 -182142040 - MER45C DNA AcHobo -1015 566 54 2144 109 0 34 chr5 17488596 17488916 -182141234 - AluSc SINE Alu 0 309 1 27 0 0 0 chr5 17489270 17489297 -182140853 + AT_rich Low_complexity Low_complexity 1 27 0 927 113 0 0 chr5 17489297 17489421 -182140729 - AluJb SINE Alu -187 125 2 2208 110 3 0 chr5 17490539 17490830 -182139320 + AluSx SINE Alu 1 292 -20 709 235 12 0 chr5 17491957 17492119 -182138031 + MER20 DNA MER1_type 56 219 0 2192 126 0 3 chr5 17492856 17493165 -182136985 + AluSx SINE Alu 1 308 -4 1569 259 92 36 chr5 17493193 17493777 -182136373 - HERVL LTR ERVL -1575 4079 3463 1444 216 276 28 chr5 17493777 17494306 -182135844 - MLT2F LTR ERVL 0 663 4 709 265 25 10 chr5 17494309 17494505 -182135645 - HERVL LTR ERVL -2258 3506 3308 4434 58 0 2 chr5 17494560 17495082 -182135068 - L1PA8 LINE L1 -6 6166 5646 310 350 73 32 chr5 17495186 17495500 -182134650 - L1MEd LINE L1 -5044 1075 749 2983 149 60 9 chr5 17498019 17498549 -182131601 + MER89 LTR ERV1 2 558 -1 2236 114 68 52 chr5 17498844 17499213 -182130937 - THE1C LTR MaLR 0 375 1 228 329 0 0 chr5 17499244 17499317 -182130833 - L2 LINE L2 -15 3298 3226 273 57 0 0 chr5 17499490 17499525 -182130625 + (TG)n Simple_repeat Simple_repeat 2 36 0 231 333 22 11 chr5 17499536 17499626 -182130524 + MIR SINE MIR 84 174 -88 369 294 196 0 chr5 17500100 17500263 -182129887 + L2 LINE L2 2563 2757 -557 23 33 0 0 chr5 17500966 17500996 -182129154 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr5 17501219 17501248 -182128902 + AT_rich Low_complexity Low_complexity 1 29 0 430 327 96 56 chr5 17501282 17501836 -182128314 + L2 LINE L2 2736 3311 -2 325 303 97 7 chr5 17501841 17501996 -182128154 - L1ME4a LINE L1 -176 5945 5777 261 116 0 0 chr5 17502006 17502049 -182128101 - L1M4 LINE L1 -971 5175 5133 300 287 87 20 chr5 17502655 17502805 -182127345 + HAL1b LINE L1 424 583 -765 189 0 0 0 chr5 17503148 17503169 -182126981 + (T)n Simple_repeat Simple_repeat 1 21 0 2310 102 0 0 chr5 17503451 17503745 -182126405 + AluSc SINE Alu 1 294 -15 1500 242 142 11 chr5 17503818 17504367 -182125783 + L2 LINE L2 1591 2211 -1103 490 205 70 16 chr5 17504372 17504503 -182125647 - MLT1C LTR MaLR 0 467 345 1898 150 72 85 chr5 17504841 17505177 -182124973 - MSTD LTR MaLR 0 396 64 790 183 15 0 chr5 17505177 17505308 -182124842 + FLAM_C SINE Alu 1 133 0 1898 150 72 85 chr5 17505308 17505372 -182124778 - MSTD LTR MaLR -332 64 1 302 310 84 35 chr5 17506054 17506196 -182123954 + MIR SINE MIR 12 160 -102 1751 109 4 0 chr5 17506407 17506637 -182123513 - AluSx SINE Alu -81 231 1 2887 171 62 10 chr5 17508384 17508864 -182121286 - MLT1D LTR MaLR 0 505 1 258 358 29 15 chr5 17509027 17509164 -182120986 - ERVL LTR ERVL -499 5265 5127 844 265 81 58 chr5 17509373 17510202 -182119948 - L1MEd LINE L1 -4863 1256 520 400 363 126 27 chr5 17510731 17511216 -182118934 - ERVL LTR ERVL -1148 4616 4084 212 162 0 0 chr5 17511585 17511622 -182118528 + (TATG)n Simple_repeat Simple_repeat 3 39 0 2878 157 32 52 chr5 17511661 17512174 -182117976 - L1MA9 LINE L1 -33 6279 5758 6566 138 84 12 chr5 17512174 17512611 -182117539 - Tigger3b DNA MER2_type -1797 1231 827 2233 116 0 0 chr5 17512611 17512903 -182117247 + AluSg SINE Alu 1 292 -18 6566 138 84 12 chr5 17512903 17513614 -182116536 - Tigger3b DNA MER2_type -2201 827 1 264 30 0 0 chr5 17513614 17513647 -182116503 + (TA)n Simple_repeat Simple_repeat 1 33 0 2878 157 32 52 chr5 17513647 17513749 -182116401 - L1MA9 LINE L1 -552 5760 5675 222 296 91 11 chr5 17515659 17515747 -182114403 - L2 LINE L2 -1 3312 3218 237 65 0 0 chr5 17515815 17515846 -182114304 + (GA)n Simple_repeat Simple_repeat 2 32 0 1131 288 81 22 chr5 17515882 17516491 -182113659 - L2 LINE L2 0 3313 2661 3174 116 30 25 chr5 17516765 17517295 -182112855 + MLT2A2 LTR ERVL 1 520 0 348 313 31 25 chr5 17517881 17518041 -182112109 + L3 LINE CR1 1412 1572 -5 743 243 29 33 chr5 17518330 17518540 -182111610 + MER3 DNA MER1_type 1 209 0 623 163 20 7 chr5 17518720 17518873 -182111277 + (TCTA)n Simple_repeat Simple_repeat 4 158 0 28 48 0 0 chr5 17520475 17520517 -182109633 + AT_rich Low_complexity Low_complexity 1 42 0 14920 204 32 32 chr5 17520517 17525394 -182104756 - L1MA5 LINE L1 -6 7315 2455 6815 130 17 247 chr5 17525375 17527970 -182102180 - L1MA5 LINE L1 -5167 2001 5 * 309 308 15 31 chr5 17528012 17528142 -182102008 - LTR16B LTR ERVL -298 166 39 2506 60 7 0 chr5 17528233 17528534 -182101616 + MLT2A1 LTR ERVL 8 310 -134 45505 65 9 1 chr5 17528534 17534134 -182096016 + HERVL-A1-A1 LTR ERVL 13 5654 0 3736 65 0 9 chr5 17534134 17534582 -182095568 + MLT2A1 LTR ERVL 1 444 0 499 313 71 6 chr5 17534583 17534765 -182095385 - ERVL LTR ERVL -1487 4277 4084 1240 146 58 120 chr5 17536097 17536406 -182093744 - L1MC/D LINE L1 -2008 5777 5488 * 1433 165 189 3 chr5 17536403 17536773 -182093377 + L1MCa LINE L1 1830 2268 -4158 1757 232 5 19 chr5 17536960 17537339 -182092811 + MLT1A2 LTR MaLR 1 374 0 797 245 195 14 chr5 17537370 17537734 -182092416 + MLT1C LTR MaLR 27 466 -1 244 255 0 0 chr5 17538225 17538272 -182091878 + polypurine Low_complexity Low_complexity 4 50 0 521 252 7 28 chr5 17538362 17538505 -182091645 - MLT1D LTR MaLR -365 140 1 4148 153 140 7 chr5 17538712 17539440 -182090710 + LTR1B LTR ERV1 2 826 0 203 301 55 0 chr5 17539500 17539573 -182090577 + MIR SINE MIR 71 147 -115 633 272 72 38 chr5 17539959 17540194 -182089956 - MIR SINE MIR -16 246 4 365 149 149 37 chr5 17542193 17542300 -182087850 - L1MB7 LINE L1 -19 6165 6047 22 0 0 0 chr5 17543142 17543164 -182086986 + AT_rich Low_complexity Low_complexity 1 22 0 288 303 53 53 chr5 17543194 17543346 -182086804 + MIR SINE MIR 79 230 -32 1595 152 114 20 chr5 17544320 17544662 -182085488 + THE1C LTR MaLR 2 375 0 288 179 51 51 chr5 17544837 17544915 -182085235 + MLT1L LTR MaLR 231 390 -203 1651 192 36 9 chr5 17547307 17547640 -182082510 - L1PA16 LINE L1 -22 6144 5803 612 363 49 14 chr5 17547869 17548235 -182081915 - LTR16C LTR ERVL 0 491 113 242 210 0 60 chr5 17548827 17548994 -182081156 + (TA)n Simple_repeat Simple_repeat 2 158 0 2227 147 0 16 chr5 17549037 17549411 -182080739 + L1PB1 LINE L1 5776 6143 -8 24 32 0 0 chr5 17549417 17549448 -182080702 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr5 17551109 17551134 -182079016 + AT_rich Low_complexity Low_complexity 1 25 0 356 390 52 0 chr5 17551993 17552338 -182077812 - ERVL LTR ERVL -3700 2064 1656 1162 119 0 0 chr5 17553016 17553204 -182076946 - AluSg/x SINE Alu 0 321 134 1770 96 118 11 chr5 17553204 17553475 -182076675 - AluSg1 SINE Alu -9 300 1 2300 112 48 31 chr5 17554316 17554674 -182075476 + THE1B LTR MaLR 1 364 0 258 62 0 0 chr5 17554674 17554706 -182075444 + THE1B-int LTR MaLR 1 32 -1548 * 3421 111 62 0 chr5 17554704 17555201 -182074949 + THE1B-int LTR MaLR 1053 1580 0 2094 133 48 25 chr5 17555203 17555557 -182074593 + THE1B LTR MaLR 3 364 0 2266 113 0 0 chr5 17556265 17556566 -182073584 - AluSx SINE Alu -11 301 1 303 291 43 10 chr5 17556594 17556713 -182073437 + MIR3 SINE MIR 78 202 -6 2528 74 17 14 chr5 17557006 17557358 -182072792 - L1PA2 LINE L1 -146 6009 5657 778 69 0 0 chr5 17557278 17557379 -182072771 + L1P1 LINE L1 5641 5741 -414 * 1179 133 5 0 chr5 17557436 17557632 -182072518 + L1MA2 LINE L1 6108 6304 0 941 235 110 25 chr5 17557826 17558229 -182071921 - L1M4 LINE L1 -2866 3280 2824 2286 108 0 9 chr5 17558229 17558544 -182071606 - AluSq SINE Alu -1 312 1 941 235 110 25 chr5 17558544 17558650 -182071500 - L1M4 LINE L1 -3322 2824 2728 282 341 157 18 chr5 17558950 17559167 -182070983 + L2 LINE L2 2183 2429 -885 353 361 5 25 chr5 17559186 17559388 -182070762 + L2 LINE L2 3113 3310 -3 3014 127 82 24 chr5 17559453 17559951 -182070199 - MER1A DNA MER1_type 0 527 1 2311 105 0 3 chr5 17560030 17560336 -182069814 - AluSx SINE Alu -7 305 1 304 281 107 8 chr5 17560597 17560718 -182069432 - MLT1H1 LTR MaLR -1 554 422 2128 104 22 32 chr5 17561225 17561541 -182068609 + AluSq SINE Alu 1 313 0 805 216 38 56 chr5 17561934 17562147 -182068003 - MER58A DNA MER1_type -15 209 1 717 185 143 37 chr5 17562326 17562515 -182067635 - MER3 DNA MER1_type 0 209 1 184 70 47 47 chr5 17562545 17562588 -182067562 + A-rich Low_complexity Low_complexity 2 44 0 853 51 8 17 chr5 17562956 17563073 -182067077 - L1PA8 LINE L1 0 6172 6057 180 0 0 0 chr5 17563073 17563093 -182067057 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1685 101 0 0 chr5 17563148 17563385 -182066765 - L1PA8 LINE L1 -11 6161 5925 2150 130 0 0 chr5 17566083 17566391 -182063759 - AluSx SINE Alu -2 310 3 194 300 56 56 chr5 17566563 17566653 -182063497 - L3b LINE CR1 -94 1489 1400 2193 121 0 0 chr5 17566988 17567285 -182062865 - AluSx SINE Alu -13 299 3 188 253 147 27 chr5 17567581 17567656 -182062494 - MIR SINE MIR -69 139 56 233 312 11 21 chr5 17568579 17568672 -182061478 - MIR SINE MIR -81 127 36 339 328 90 25 chr5 17569003 17569204 -182060946 + MIR SINE MIR 20 233 -29 237 65 0 0 chr5 17570114 17570145 -182060005 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 3495 219 55 32 chr5 17570696 17570794 -182059356 - L1MD1 LINE L1 -3 6633 6539 1291 261 19 11 chr5 17570794 17571165 -182058985 - MLT1A2 LTR MaLR 0 374 1 3495 219 55 32 chr5 17571165 17572967 -182057183 - L1MD1 LINE L1 -97 6539 4654 1750 164 31 65 chr5 17572966 17573303 -182056847 - L1MD1 LINE L1 -4582 1958 1638 * 997 69 0 0 chr5 17573303 17573434 -182056716 - L1PB1 LINE L1 -1 6150 6020 1750 164 31 65 chr5 17573434 17573542 -182056608 - L1MD1 LINE L1 -4902 1638 1528 1682 194 66 17 chr5 17573544 17573908 -182056242 - MLT2D LTR ERVL -40 480 1 3841 243 56 21 chr5 17573908 17575189 -182054961 - L1MD1 LINE L1 -5038 1502 19 35 24 0 0 chr5 17575761 17575803 -182054347 + AT_rich Low_complexity Low_complexity 1 42 0 32 0 0 0 chr5 17575832 17575864 -182054286 + AT_rich Low_complexity Low_complexity 1 32 0 278 249 27 141 chr5 17575988 17576173 -182053977 - MIR SINE MIR -79 183 20 4264 277 87 27 chr5 17576439 17578255 -182051895 + L1MEc LINE L1 82 1788 -4427 2256 96 13 10 chr5 17578255 17578557 -182051593 + AluSc SINE Alu 1 303 -6 4264 277 87 27 chr5 17578557 17579614 -182050536 + L1MEc LINE L1 1788 3127 -3088 2235 153 11 0 chr5 17579614 17579974 -182050176 + MER47A DNA MER2_type 1 364 -2 4264 277 87 27 chr5 17579974 17580520 -182049630 + L1MEc LINE L1 3127 3639 -2576 1665 226 79 47 chr5 17581193 17581509 -182048641 - L1ME1 LINE L1 -5 6161 5820 476 32 16 0 chr5 17581509 17581571 -182048579 + (TG)n Simple_repeat Simple_repeat 2 64 0 1665 226 79 47 chr5 17581571 17581786 -182048364 - L1ME1 LINE L1 -346 5820 5613 212 220 20 0 chr5 17581786 17581836 -182048314 + (TA)n Simple_repeat Simple_repeat 2 52 0 306 337 0 0 chr5 17581837 17581926 -182048224 + L1MC4 LINE L1 6614 6702 -1340 * 310 268 0 62 chr5 17581869 17581966 -182048184 - L1MC4 LINE L1 -1337 6705 6615 468 245 0 33 chr5 17581990 17582174 -182047976 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 416 247 16 36 chr5 17582193 17582808 -182047342 + (CATATA)n Simple_repeat Simple_repeat 1 602 0 1336 226 35 15 chr5 17582808 17583313 -182046837 - L1ME1 LINE L1 -560 5606 5088 910 193 0 0 chr5 17583308 17583505 -182046645 + L1MEc LINE L1 4302 4498 -1717 * 15533 57 3 5 chr5 17583505 17585463 -182044687 + L1PA3 LINE L1 1 1955 -4191 26018 31 0 0 chr5 17585463 17589384 -182040766 + L1PA3 LINE L1 2233 6152 -3 2946 207 39 12 chr5 17589386 17590134 -182040016 + L1MEc LINE L1 4467 5234 -981 1359 273 99 13 chr5 17590154 17590620 -182039530 - L1MEc LINE L1 -5658 738 233 679 200 0 13 chr5 17590635 17590790 -182039360 - L1MB8 LINE L1 -1 6177 6025 565 248 81 68 chr5 17590885 17591208 -182038942 - L1ME1 LINE L1 -1296 4850 4524 1138 305 76 8 chr5 17591317 17592045 -182038105 - L1ME1 LINE L1 -1828 4318 3528 386 20 0 0 chr5 17592044 17592095 -182038055 - L1PA2 LINE L1 -2 6153 6103 * 2968 225 54 53 chr5 17592199 17593430 -182036720 + L1ME1 LINE L1 4021 5253 -913 3684 142 18 5 chr5 17593430 17594055 -182036095 + L1PB4 LINE L1 5510 6142 -14 2968 225 54 53 chr5 17594055 17594966 -182035184 + L1ME1 LINE L1 5253 6161 -5 565 207 49 0 chr5 17594976 17595140 -182035010 + L1 LINE L1 2269 2440 -3706 45 75 0 0 chr5 17595515 17595609 -182034541 + AT_rich Low_complexity Low_complexity 1 94 0 1616 154 49 10 chr5 17597023 17597329 -182032821 - MER46B DNA MER2_type 0 236 44 210 37 0 0 chr5 17597696 17597723 -182032427 + (TG)n Simple_repeat Simple_repeat 2 28 0 1335 256 62 41 chr5 17598742 17598881 -182031269 + MER74B LTR ERVL 58 193 -429 2325 95 0 0 chr5 17598881 17599176 -182030974 + AluSc SINE Alu 1 295 -14 1335 256 62 41 chr5 17599176 17599524 -182030626 + MER74B LTR ERVL 193 555 -67 1844 214 36 42 chr5 17599623 17599753 -182030397 + MLT1D LTR MaLR 1 130 -375 1823 146 93 74 chr5 17599753 17600101 -182030049 + MSTB LTR MaLR 1 360 -66 2096 142 0 0 chr5 17600101 17600397 -182029753 + AluSq SINE Alu 1 296 -17 1823 146 93 74 chr5 17600397 17600466 -182029684 + MSTB LTR MaLR 360 426 0 1844 214 36 42 chr5 17600466 17600830 -182029320 + MLT1D LTR MaLR 130 492 -13 389 268 32 24 chr5 17602421 17602544 -182027606 + MIR3 SINE MIR 67 190 -18 2154 176 5 17 chr5 17604060 17604417 -182025733 - L1PB4 LINE L1 -7 6149 5796 225 0 0 0 chr5 17604417 17604442 -182025708 + (TG)n Simple_repeat Simple_repeat 2 26 0 2154 176 5 17 chr5 17604442 17604494 -182025656 - L1PB4 LINE L1 -360 5796 5745 3148 191 13 7 chr5 17604495 17605207 -182024943 + L1 LINE L1 4328 5043 -1103 633 199 0 0 chr5 17605284 17605415 -182024735 + (CA)n Simple_repeat Simple_repeat 2 132 0 2335 185 41 11 chr5 17605416 17605875 -182024275 - MLT2B2 LTR ERVL -40 475 3 729 134 17 0 chr5 17606344 17606463 -182023687 + MLT1E LTR MaLR 40 160 -433 2415 226 68 15 chr5 17606604 17607119 -182023031 + L1M4 LINE L1 4682 5243 -903 1784 172 33 7 chr5 17607119 17607421 -182022729 + AluJo SINE Alu 1 310 -2 2415 226 68 15 chr5 17607421 17607583 -182022567 + L1M4 LINE L1 5243 5395 -751 10688 204 38 10 chr5 17607592 17612919 -182017231 + L1M2 LINE L1 4 5525 -803 2016 172 36 33 chr5 17612919 17613469 -182016681 - MLT2A2 LTR ERVL 0 554 1 657 123 0 0 chr5 17613469 17613575 -182016575 + L1M2 LINE L1 5521 5626 -856 * 10347 162 20 7 chr5 17613570 17614382 -182015768 + L1MA1 LINE L1 3122 3922 -2380 2833 92 0 12 chr5 17614382 17614785 -182015365 + L1PA10 LINE L1 5771 6168 0 10347 162 20 7 chr5 17614785 17617029 -182013121 + L1MA1 LINE L1 3922 6220 -82 2657 151 22 0 chr5 17617029 17617484 -182012666 + L1PA16 LINE L1 5685 6157 -9 26 64 0 0 chr5 17617484 17617531 -182012619 + AT_rich Low_complexity Low_complexity 1 47 0 2102 134 0 6 chr5 17617968 17618282 -182011868 - AluSx SINE Alu 0 312 1 492 296 26 16 chr5 17618718 17618907 -182011243 + LTR16C LTR ERVL 301 491 0 477 280 0 0 chr5 17619286 17619386 -182010764 - L2 LINE L2 -15 3298 3199 23 0 0 0 chr5 17619403 17619426 -182010724 + AT_rich Low_complexity Low_complexity 1 23 0 2486 65 0 3 chr5 17619528 17619837 -182010313 - AluY SINE Alu -3 308 1 2266 81 3 0 chr5 17622318 17622624 -182007526 + AluSp SINE Alu 1 307 0 1263 238 59 0 chr5 17623857 17624177 -182005973 + MER58B DNA MER1_type 1 339 -2 2293 169 24 10 chr5 17624501 17624916 -182005234 + MSTB LTR MaLR 1 421 -5 568 314 207 5 chr5 17624922 17625308 -182004842 + L2 LINE L2 2199 2662 -652 2251 185 114 67 chr5 17626472 17627261 -182002889 + LTR1B LTR ERV1 1 826 0 366 264 32 0 chr5 17628257 17628382 -182001768 + GA-rich Low_complexity Low_complexity 1 129 0 310 270 133 60 chr5 17628385 17628618 -182001532 + L1MCa LINE L1 2229 2478 -3948 323 186 76 25 chr5 17628813 17628931 -182001219 - Charlie1 DNA MER1_type 0 2761 2638 * 1508 209 103 2 chr5 17628930 17629329 -182000821 - Charlie1 DNA MER1_type -1746 1015 576 836 233 30 34 chr5 17629329 17629655 -182000495 - MER92B LTR ERV1 -2 634 94 254 188 16 16 chr5 17629659 17629723 -182000427 + MER58B DNA MER1_type 278 341 0 339 271 17 25 chr5 17630450 17630568 -181999582 - L2 LINE L2 -5 3308 3192 22 0 0 0 chr5 17630700 17630722 -181999428 + AT_rich Low_complexity Low_complexity 1 22 0 2139 151 64 25 chr5 17631307 17631711 -181998439 - MSTA LTR MaLR -4 424 5 1405 152 12 4 chr5 17632257 17632514 -181997636 - L1M2 LINE L1 -718 5573 5315 923 145 6 0 chr5 17632517 17632689 -181997461 + CT-rich Low_complexity Low_complexity 4 176 0 336 328 21 21 chr5 17632913 17633102 -181997048 - MLT1J LTR MaLR -92 419 231 1117 256 0 6 chr5 17634185 17634521 -181995629 - L1PB1 LINE L1 -1017 5129 4796 * 5577 109 5 0 chr5 17634514 17635467 -181994683 + L1PB1 LINE L1 5147 6104 -47 180 111 0 0 chr5 17635910 17635937 -181994213 + (GA)n Simple_repeat Simple_repeat 2 28 0 263 298 215 22 chr5 17635962 17636278 -181993872 - L2 LINE L2 -635 2679 2303 237 258 113 0 chr5 17636331 17636393 -181993757 - L2 LINE L2 0 3313 3245 304 343 87 18 chr5 17636706 17636925 -181993225 + MIR SINE MIR 2 235 -27 565 336 97 25 chr5 17636960 17637484 -181992666 - L2 LINE L2 -1225 2089 1528 350 237 21 10 chr5 17639553 17639650 -181990500 - MER103 DNA DNA -64 102 5 2032 113 4 0 chr5 17641148 17641413 -181988737 - AluSp SINE Alu -47 266 1 308 269 78 14 chr5 17641627 17641768 -181988382 + MLT1J2 LTR MaLR 34 183 -267 263 255 137 65 chr5 17641769 17641922 -181988228 + MLT1J2 LTR MaLR 285 448 -2 296 341 10 73 chr5 17642614 17642819 -181987331 + MIR SINE MIR 23 214 -48 241 280 0 0 chr5 17643899 17643949 -181986201 + (CGTG)n Simple_repeat Simple_repeat 4 53 0 343 279 27 23 chr5 17644025 17644219 -181985931 + L1M4b LINE L1 -533 4294967217 -6359 730 164 62 69 chr5 17644295 17644464 -181985686 - MLT1A1 LTR MaLR 0 365 212 416 271 5 145 chr5 17644936 17645150 -181985000 + MER5A DNA MER1_type 3 186 -3 1280 232 42 10 chr5 17645892 17646275 -181983875 + MER114 LTR ERV 7 401 -247 892 311 37 63 chr5 17646342 17646805 -181983345 + L1M4b LINE L1 175 625 -5688 272 271 59 12 chr5 17646789 17646874 -181983276 + L1M4b LINE L1 985 1073 -5240 * 3193 219 34 7 chr5 17647083 17647916 -181982234 + L1M4b LINE L1 777 1783 -4530 64 50 0 0 chr5 17647965 17648064 -181982086 + AT_rich Low_complexity Low_complexity 1 99 0 238 303 0 0 chr5 17648065 17648154 -181981996 - L1MC4 LINE L1 -1339 6703 6615 311 182 0 0 chr5 17648159 17648214 -181981936 - L1MC4 LINE L1 -1339 6703 6649 955 219 120 61 chr5 17648519 17648887 -181981263 + MLT1G1 LTR MaLR 1 357 -185 786 196 5 43 chr5 17649338 17649522 -181980628 - MER5B DNA MER1_type 0 178 2 2651 158 22 16 chr5 17649644 17650092 -181980058 + LTR32 LTR ERVL 21 471 0 519 301 108 29 chr5 17650156 17650535 -181979615 + MLT1I LTR MaLR 1 409 0 1893 226 73 28 chr5 17651635 17652167 -181977983 - MER74A LTR ERVL -2 556 1 1431 261 68 25 chr5 17652243 17652746 -181977404 - MLT1F1 LTR MaLR 0 567 43 295 209 236 18 chr5 17653019 17653067 -181977083 + MER94 DNA DNA 1 37 -97 2579 104 6 11 chr5 17653067 17653433 -181976717 + THE1B LTR MaLR 1 364 0 295 209 236 18 chr5 17653433 17653494 -181976656 + MER94 DNA DNA 37 134 0 42324 36 22 2 chr5 17654117 17660171 -181969979 + L1PA3 LINE L1 13 6192 0 319 305 21 0 chr5 17660340 17660481 -181969669 - L1ME4a LINE L1 -229 5892 5749 181 363 62 0 chr5 17660537 17660617 -181969533 - MIR SINE MIR -40 222 138 2037 114 0 11 chr5 17661081 17661362 -181968788 + AluSx SINE Alu 22 299 -13 271 296 52 37 chr5 17662009 17662144 -181968006 + MER117 DNA MER1_type 3 139 -58 1795 251 48 39 chr5 17662768 17663588 -181966562 - Charlie2 DNA MER1_type -11 2851 2025 2527 66 3 0 chr5 17663754 17664057 -181966093 + AluSp SINE Alu 2 305 -8 25 0 0 0 chr5 17664412 17664437 -181965713 + AT_rich Low_complexity Low_complexity 1 25 0 2105 152 8 14 chr5 17664520 17664883 -181965267 + MLT1A1 LTR MaLR 5 365 0 317 159 0 14 chr5 17665445 17665514 -181964636 + (TG)n Simple_repeat Simple_repeat 2 69 0 656 328 50 55 chr5 17665756 17666341 -181963809 + ERVL LTR ERVL 3617 4405 -798 334 354 137 15 chr5 17666353 17666616 -181963534 - L2 LINE L2 -566 2748 2454 5920 212 10 6 chr5 17667729 17668072 -181962078 - L1PA16 LINE L1 -1 6165 5825 189 74 0 0 chr5 17668072 17668099 -181962051 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2002 109 22 0 chr5 17668099 17668375 -181961775 - AluSc SINE Alu -27 282 1 5920 212 10 6 chr5 17668375 17670157 -181959993 - L1PA16 LINE L1 -340 5826 4043 243 376 40 10 chr5 17670205 17670306 -181959844 - L2 LINE L2 -2 3311 3208 620 150 9 0 chr5 17671541 17671654 -181958496 + GA-rich Low_complexity Low_complexity 1 114 0 435 252 118 0 chr5 17671764 17671883 -181958267 + MLT1J2 LTR MaLR 72 204 -246 267 308 98 7 chr5 17673718 17673861 -181956289 - MIR SINE MIR -44 218 63 1098 345 71 43 chr5 17675018 17676023 -181954127 + ERVL LTR ERVL 791 1823 -3941 6159 97 21 1 chr5 17676035 17676994 -181953156 - L1PB1 LINE L1 -1 6150 5174 7697 202 21 47 chr5 17676994 17677035 -181953115 + L1 LINE L1 3234 3275 -2871 2587 42 3 0 chr5 17677035 17677342 -181952808 + AluY SINE Alu 1 308 -3 7697 202 21 47 chr5 17677342 17678546 -181951604 + L1 LINE L1 3275 4412 -1734 201 39 0 0 chr5 17678546 17678572 -181951578 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 7697 202 21 47 chr5 17678572 17679304 -181950846 + L1 LINE L1 4412 5161 -985 1524 325 100 36 chr5 17679307 17681118 -181949032 + ERVL LTR ERVL 1775 3708 -1777 1300 313 18 20 chr5 17681405 17681849 -181948301 + ERVL LTR ERVL 4109 4551 -1213 921 312 57 3 chr5 17681953 17682270 -181947880 + ERVL LTR ERVL 4745 5078 -686 438 69 0 0 chr5 17682563 17682621 -181947529 + (TA)n Simple_repeat Simple_repeat 1 58 0 1627 177 62 6 chr5 17683533 17683855 -181946295 + MER2 DNA MER2_type 6 345 0 24 32 0 0 chr5 17684102 17684133 -181946017 + AT_rich Low_complexity Low_complexity 1 31 0 198 244 165 55 chr5 17684757 17684884 -181945266 + L2 LINE L2 3173 3313 0 240 278 113 17 chr5 17684951 17685066 -181945084 - MIR SINE MIR -67 141 16 2212 231 68 49 chr5 17685359 17686261 -181943889 - L1M4 LINE L1 -838 6119 5201 1685 233 36 10 chr5 17687470 17687856 -181942294 - L1M4 LINE L1 -6460 399 4 563 327 48 56 chr5 17687868 17688922 -181941228 - L1MEc LINE L1 -5312 1084 39 24 67 0 0 chr5 17688943 17688988 -181941162 + AT_rich Low_complexity Low_complexity 1 45 0 2045 144 3 0 chr5 17690083 17690382 -181939768 + AluSx SINE Alu 1 300 -12 299 122 0 0 chr5 17690581 17690644 -181939506 + Alu SINE Alu 239 301 0 345 24 0 0 chr5 17690935 17690977 -181939173 + (TG)n Simple_repeat Simple_repeat 1 42 0 367 311 49 18 chr5 17691108 17691272 -181938878 + MIR SINE MIR 5 173 -89 205 328 17 0 chr5 17691803 17691861 -181938289 + L2 LINE L2 3012 3070 -243 23 86 0 0 chr5 17692363 17692421 -181937729 + AT_rich Low_complexity Low_complexity 1 58 0 239 313 0 36 chr5 17692615 17692727 -181937423 + MLT1H LTR MaLR 66 173 -376 4266 170 11 12 chr5 17692842 17693576 -181936574 - MER44D DNA MER2_type 0 605 1 22 56 0 0 chr5 17693703 17693739 -181936411 + AT_rich Low_complexity Low_complexity 1 36 0 442 326 75 27 chr5 17693868 17694162 -181935988 + L1ME4a LINE L1 5576 5883 -238 2882 124 17 2 chr5 17694295 17694867 -181935283 - L1PA16 LINE L1 0 6166 5486 2976 217 11 11 chr5 17694874 17695659 -181934491 + L1 LINE L1 3103 3887 -2259 322 316 83 23 chr5 17696003 17696136 -181934014 - MLT1K LTR MaLR -408 180 40 1981 157 0 20 chr5 17697198 17697504 -181932646 - AluSx SINE Alu -12 300 1 193 344 58 63 chr5 17697674 17697863 -181932287 + MIR3 SINE MIR 16 203 -5 532 218 18 0 chr5 17697962 17698072 -181932078 + HERVL40 LTR ERVL 2794 2905 -2625 729 301 53 61 chr5 17698244 17698620 -181931530 - L2 LINE L2 -682 2632 2260 244 246 14 0 chr5 17698629 17698698 -181931452 - L2 LINE L2 -1320 1994 1925 387 377 52 0 chr5 17698704 17698895 -181931255 - L2 LINE L2 -2070 1244 1044 1532 304 23 4 chr5 17698907 17699426 -181930724 + HERVL40 LTR ERVL 2641 3169 -2595 370 171 40 0 chr5 17699451 17699527 -181930623 - LTR40a LTR ERVL -416 103 25 1211 257 66 12 chr5 17699545 17699864 -181930286 + LTR40a LTR ERVL 175 510 -9 329 269 19 9 chr5 17699879 17699987 -181930163 + HERVL40 LTR ERVL 8 116 -5414 331 254 87 22 chr5 17700289 17700427 -181929723 + HERVL40 LTR ERVL 1077 1223 -4307 320 208 0 26 chr5 17700517 17700594 -181929556 + HERVL40 LTR ERVL 1455 1529 -4001 2747 253 78 16 chr5 17700658 17701464 -181928686 + HERVL40 LTR ERVL 2050 2905 -2625 242 150 0 0 chr5 17701467 17701507 -181928643 + LTR40b LTR ERVL 423 462 0 572 241 19 6 chr5 17701518 17701676 -181928474 - LTR40a LTR ERVL -359 160 1 2597 250 60 23 chr5 17701715 17702065 -181928085 + HERVL40 LTR ERVL 3765 4101 -1663 1849 175 32 48 chr5 17702065 17702465 -181927685 - MSTD LTR MaLR 0 396 3 2597 250 60 23 chr5 17702465 17702901 -181927249 + HERVL40 LTR ERVL 4101 4580 -1184 404 231 28 7 chr5 17702907 17703050 -181927100 - L1M LINE L1 -763 5401 5256 1823 130 75 132 chr5 17703170 17703624 -181926526 - MSTA LTR MaLR 0 428 1 822 274 128 34 chr5 17704115 17704509 -181925641 + MLT1H LTR MaLR 1 488 -61 2274 71 34 0 chr5 17704509 17704805 -181925345 - AluY SINE Alu -5 306 1 822 274 128 34 chr5 17704805 17704869 -181925281 + MLT1H LTR MaLR 488 545 -4 1196 68 0 0 chr5 17705293 17705441 -181924709 + AluY SINE Alu 155 302 -9 2069 109 40 7 chr5 17705458 17705760 -181924390 - AluSx SINE Alu 0 312 1 371 264 210 12 chr5 17705904 17706071 -181924079 + MIR SINE MIR 53 252 -10 201 286 29 14 chr5 17706428 17706498 -181923652 - MIR SINE MIR -110 152 82 252 234 143 26 chr5 17707407 17707484 -181922666 - MIR SINE MIR -85 123 38 3828 143 27 15 chr5 17707625 17708169 -181921981 + L1PA16 LINE L1 5485 6040 -126 2428 50 3 3 chr5 17708169 17708471 -181921679 + AluY SINE Alu 1 302 -9 3828 143 27 15 chr5 17708471 17708590 -181921560 + L1PA16 LINE L1 6040 6156 -10 336 154 0 0 chr5 17708813 17708865 -181921285 + tRNA-Arg-CGC tRNA tRNA 2 53 -23 24 0 0 0 chr5 17709414 17709438 -181920712 + AT_rich Low_complexity Low_complexity 1 24 0 787 247 50 77 chr5 17709620 17710021 -181920129 + MLT1C LTR MaLR 35 424 -43 27 49 0 0 chr5 17711305 17711346 -181918804 + AT_rich Low_complexity Low_complexity 1 41 0 1145 204 47 52 chr5 17712594 17712976 -181917174 + LTR37A LTR ERV1 1 380 -46 738 308 25 8 chr5 17713014 17713254 -181916896 - MIR SINE MIR -1 261 18 1276 207 118 5 chr5 17714140 17714522 -181915628 - L1M4 LINE L1 -876 5270 4846 1110 253 38 40 chr5 17714731 17715102 -181915048 - MLT1A2 LTR MaLR -4 370 1 371 287 55 44 chr5 17715206 17715387 -181914763 - MIR3 SINE MIR -6 202 20 1728 138 70 48 chr5 17717523 17717879 -181912271 - THE1B LTR MaLR 0 364 1 34839 91 11 12 chr5 17718129 17724286 -181905864 + L1PA6 LINE L1 11 6153 -1 191 370 9 44 chr5 17724785 17725012 -181905138 - L2 LINE L2 -2652 662 444 182 234 156 62 chr5 17728433 17728497 -181901653 + MER5B DNA MER1_type 35 104 -74 1899 119 36 103 chr5 17729642 17730030 -181900120 + THE1B LTR MaLR 1 362 -2 878 167 111 12 chr5 17730095 17730451 -181899699 + MLT1D LTR MaLR 85 505 0 3062 161 19 9 chr5 17731688 17732267 -181897883 + L1MA9 LINE L1 5728 6312 0 195 42 0 0 chr5 17733642 17733666 -181896484 + (CA)n Simple_repeat Simple_repeat 1 24 0 221 313 0 15 chr5 17733919 17733986 -181896164 - L2 LINE L2 -9 3263 3198 2027 135 10 3 chr5 17734046 17734334 -181895816 + AluSx SINE Alu 1 290 -22 1126 248 148 19 chr5 17734376 17734886 -181895264 + MER52A LTR ERV1 1 656 -1099 594 222 37 7 chr5 17734883 17735018 -181895132 + MER52A LTR ERV1 1616 1754 -1 * 917 214 99 60 chr5 17735433 17735835 -181894315 - MLT1C LTR MaLR -4 463 46 323 302 19 19 chr5 17737626 17737732 -181892418 + MIR3 SINE MIR 98 203 -5 1509 159 23 13 chr5 17739632 17739933 -181890217 - L1MA7 LINE L1 0 6291 5988 1874 181 38 30 chr5 17739945 17740485 -181889665 - MLT2A2 LTR ERVL -8 546 1 1859 185 30 5 chr5 17740488 17740861 -181889289 - L1MA7 LINE L1 -304 5987 5606 * 1879 178 30 25 chr5 17740859 17741291 -181888859 + L1 LINE L1 4869 5302 -844 319 24 0 0 chr5 17741296 17741337 -181888813 - L1PB1 LINE L1 -254 5897 5857 1707 73 30 0 chr5 17741337 17741560 -181888590 + L1PB1 LINE L1 5911 6151 0 376 111 69 0 chr5 17741566 17741638 -181888512 + L1M4 LINE L1 5177 5253 -893 6175 186 9 11 chr5 17741783 17743468 -181886682 + L1P5 LINE L1 3885 5564 -587 707 218 64 5 chr5 17743609 17743845 -181886305 + L1MEc LINE L1 2055 2269 -4157 285 259 19 19 chr5 17743857 17743965 -181886185 + (TA)n Simple_repeat Simple_repeat 1 108 0 189 281 0 85 chr5 17743976 17744027 -181886123 - MIR SINE MIR -147 115 72 2571 108 3 13 chr5 17744027 17744406 -181885744 - THE1C LTR MaLR 0 375 1 189 281 0 85 chr5 17744406 17744436 -181885714 - MIR SINE MIR -190 72 41 2189 146 66 32 chr5 17745588 17746104 -181884046 - MLT2A2 LTR ERVL 0 554 1 1987 166 26 55 chr5 17746249 17746634 -181883516 - MLT1B LTR MaLR -16 374 1 195 191 71 0 chr5 17746769 17746811 -181883339 - L2 LINE L2 -230 3042 2998 993 308 45 23 chr5 17746830 17747075 -181883075 - L2 LINE L2 -10 3303 3065 2222 142 95 12 chr5 17747075 17747484 -181882666 - MER65A LTR ERV1 0 445 3 993 308 45 23 chr5 17747484 17747819 -181882331 - L2 LINE L2 -248 3065 2712 972 180 115 0 chr5 17747826 17748009 -181882141 + MER3 DNA MER1_type 6 209 0 377 304 149 5 chr5 17748017 17748218 -181881932 - L2 LINE L2 -617 2697 2468 324 278 0 21 chr5 17748619 17748716 -181881434 - L1ME LINE L1 -463 5707 5613 1872 199 5 39 chr5 17748718 17749102 -181881048 + MLT2D LTR ERVL 1 372 -42 450 0 0 0 chr5 17749102 17749152 -181880998 + (CA)n Simple_repeat Simple_repeat 2 51 0 1872 199 5 39 chr5 17749152 17749179 -181880971 + MLT2D LTR ERVL 372 398 -16 299 364 19 6 chr5 17749226 17749388 -181880762 - L1ME LINE L1 -641 5525 5362 453 337 105 32 chr5 17749640 17750260 -181879890 - L1ME LINE L1 -1098 5048 4384 237 121 0 0 chr5 17750550 17750583 -181879567 - MLT1I LTR MaLR -8 401 369 296 278 56 16 chr5 17750823 17750949 -181879201 - MLT1J2 LTR MaLR -319 131 1 355 231 152 63 chr5 17750954 17751257 -181878893 - L1ME LINE L1 -2154 3992 3663 328 330 155 10 chr5 17751344 17751544 -181878606 - L1ME LINE L1 -2717 3429 3201 274 343 43 36 chr5 17751785 17751925 -181878225 + MIR3 SINE MIR 55 195 -13 307 252 67 17 chr5 17751952 17752071 -181878079 + MLT1I LTR MaLR 20 144 -265 1379 179 67 22 chr5 17752965 17753277 -181876873 + L1MB8 LINE L1 5853 6178 0 2236 179 20 20 chr5 17753572 17753968 -181876182 + MSTD LTR MaLR 1 396 0 7843 232 29 21 chr5 17753970 17755690 -181874460 + MSTD-int LTR MaLR 2 1735 0 2276 178 18 25 chr5 17755690 17756088 -181874062 + MSTD LTR MaLR 1 395 -1 2232 106 3 3 chr5 17756366 17756667 -181873483 + AluSg SINE Alu 1 301 -9 462 278 80 6 chr5 17757496 17757672 -181872478 + MIR3 SINE MIR 20 208 0 1856 160 65 9 chr5 17758520 17758845 -181871305 - MER61A LTR ERV1 0 343 1 752 248 96 26 chr5 17758941 17759026 -181871124 - MIR SINE MIR -7 255 177 2094 211 54 66 chr5 17759026 17759600 -181870550 + MLT1F1 LTR MaLR 1 567 0 752 248 96 26 chr5 17759600 17759744 -181870406 - MIR SINE MIR -85 177 10 1446 189 3 40 chr5 17761015 17761316 -181868834 + AluJb SINE Alu 3 292 -20 646 221 41 67 chr5 17762038 17762233 -181867917 - MLT1E2 LTR MaLR -377 249 60 267 280 153 25 chr5 17762602 17762720 -181867430 + MIR SINE MIR 129 261 -1 325 358 37 30 chr5 17762780 17762914 -181867236 + L2 LINE L2 3138 3272 0 360 279 23 0 chr5 17762936 17763022 -181867128 - Charlie8 DNA MER1_type -2329 88 1 270 226 71 24 chr5 17764469 17764553 -181865597 + MLT1G LTR MaLR 33 120 -435 470 300 3 6 chr5 17764843 17765001 -181865149 + MLT1G LTR MaLR 109 274 -314 751 333 110 25 chr5 17765024 17765586 -181864564 + L2 LINE L2 2225 2834 -480 248 286 0 0 chr5 17765686 17765770 -181864380 + L1MC4 LINE L1 6619 6702 -1340 489 321 0 21 chr5 17765875 17766015 -181864135 + L2 LINE L2 3136 3272 0 2393 87 7 0 chr5 17766644 17766944 -181863206 - AluSc SINE Alu -7 302 1 277 283 121 42 chr5 17766945 17767111 -181863039 - L2 LINE L2 -987 2327 2149 295 270 111 32 chr5 17768037 17768163 -181861987 - MER5B DNA MER1_type 0 178 43 741 65 0 0 chr5 17768513 17768621 -181861529 + (TC)n Simple_repeat Simple_repeat 2 109 0 1619 179 8 0 chr5 17768621 17768878 -181861272 - AluJb SINE Alu -48 264 6 273 89 0 0 chr5 17770348 17770393 -181859757 + (A)n Simple_repeat Simple_repeat 1 45 0 353 331 0 6 chr5 17770718 17770896 -181859254 + (TA)n Simple_repeat Simple_repeat 2 178 0 2146 89 0 0 chr5 17770982 17771251 -181858899 + AluSg SINE Alu 36 304 -6 2169 118 0 26 chr5 17771670 17771975 -181858175 - AluSx SINE Alu -15 297 1 2622 134 11 30 chr5 17772603 17773044 -181857106 - L1MB3 LINE L1 -7 6176 5744 4834 157 36 33 chr5 17773079 17773795 -181856355 - pTR5 LTR ERV1 -238 2200 1488 203 77 0 26 chr5 17773795 17773834 -181856316 + (CGGG)n Simple_repeat Simple_repeat 3 40 0 4834 157 36 33 chr5 17773834 17774308 -181855842 - pTR5 LTR ERV1 -950 1488 281 268 232 18 0 chr5 17774312 17774368 -181855782 - U6 snRNA snRNA -49 58 2 716 168 6 0 chr5 17774837 17775010 -181855140 + (ATG)n Simple_repeat Simple_repeat 1 174 0 402 253 0 0 chr5 17775018 17775113 -181855037 - MIR SINE MIR -16 246 152 7688 48 0 0 chr5 17775113 17776471 -181853679 - L1PA6 LINE L1 0 6154 4804 17535 49 2 1 chr5 17776471 17778639 -181851511 + L1PA6 LINE L1 2631 4802 -1344 316 286 67 19 chr5 17778639 17778744 -181851406 - MIR SINE MIR -103 159 50 684 294 68 0 chr5 17779984 17780205 -181849945 + MIR SINE MIR 1 236 -26 216 0 0 0 chr5 17780654 17780678 -181849472 + (GA)n Simple_repeat Simple_repeat 1 24 0 461 269 90 6 chr5 17781124 17781291 -181848859 - MIR SINE MIR -53 209 29 433 252 37 55 chr5 17782355 17782769 -181847381 + L1MC4 LINE L1 7411 8042 0 194 244 0 0 chr5 17783008 17783053 -181847097 + MIR SINE MIR 68 112 -150 1986 130 3 3 chr5 17784521 17784806 -181845344 - AluSx SINE Alu -24 288 4 1942 167 3 0 chr5 17785676 17785982 -181844168 - AluJo SINE Alu -5 307 1 1705 139 53 47 chr5 17786273 17786612 -181843538 + MER4A LTR ERV1 1 341 -323 2176 98 17 7 chr5 17786614 17786909 -181843241 + AluSg SINE Alu 1 298 -12 607 163 195 65 chr5 17786927 17787187 -181842963 + MER4C LTR ERV1 157 457 -8 915 146 0 7 chr5 17787973 17788110 -181842040 - U8 snRNA snRNA 0 136 1 649 304 5 27 chr5 17789209 17789433 -181840717 - MIR SINE MIR -4 258 40 22 0 0 0 chr5 17789520 17789542 -181840608 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr5 17790724 17790746 -181839404 + (TG)n Simple_repeat Simple_repeat 1 22 0 372 211 167 26 chr5 17790805 17790919 -181839231 + MER96 DNA MER1_type? 32 161 -14 3556 94 2 13 chr5 17791469 17791927 -181838223 - MLT2A2 LTR ERVL 0 453 1 580 253 36 24 chr5 17792101 17792267 -181837883 + MER5B DNA MER1_type 1 168 -10 298 253 48 0 chr5 17793454 17793537 -181836613 + MIR SINE MIR 176 262 0 358 305 13 20 chr5 17793641 17793792 -181836358 - MIR SINE MIR -24 238 89 207 0 0 0 chr5 17794623 17794646 -181835504 + (TG)n Simple_repeat Simple_repeat 2 24 0 480 111 0 0 chr5 17796428 17796500 -181833650 + (TA)n Simple_repeat Simple_repeat 2 73 0 231 224 0 0 chr5 17796571 17796620 -181833530 - L1ME4a LINE L1 -106 6015 5967 3791 184 49 26 chr5 17798028 17798752 -181831398 - L1MB2 LINE L1 -4 6167 5461 2102 131 60 23 chr5 17798752 17799103 -181831047 - THE1B LTR MaLR 0 364 1 3791 184 49 26 chr5 17799103 17799233 -181830917 - L1MB2 LINE L1 -710 5461 5335 279 0 0 0 chr5 17799233 17799264 -181830886 + (TG)n Simple_repeat Simple_repeat 2 32 0 3791 184 49 26 chr5 17799264 17799862 -181830288 - L1MB2 LINE L1 -836 5335 4677 336 379 17 34 chr5 17800059 17800236 -181829914 + MIR3 SINE MIR 32 205 -3 367 137 27 0 chr5 17800349 17800422 -181829728 + (TA)n Simple_repeat Simple_repeat 1 75 0 299 223 6 3 chr5 17801323 17801450 -181828700 + MER5A DNA MER1_type 4 188 -1 396 0 0 0 chr5 17802035 17802079 -181828071 + (TG)n Simple_repeat Simple_repeat 2 45 0 1989 197 69 17 chr5 17802660 17802806 -181827344 - L1MD3 LINE L1 -8 7987 7850 2727 155 7 0 chr5 17802806 17803231 -181826919 + MSTC LTR MaLR 1 428 0 1989 197 69 17 chr5 17803231 17803608 -181826542 - L1MD3 LINE L1 -145 7850 7437 16073 208 29 18 chr5 17803745 17810461 -181819689 - L1PA15 LINE L1 -3 6813 6 783 295 115 25 chr5 17811358 17811524 -181818626 + LTR16C LTR ERVL 91 241 -250 1165 161 19 5 chr5 17811524 17811729 -181818421 + MER3 DNA MER1_type 1 208 -1 783 295 115 25 chr5 17811729 17811928 -181818222 + LTR16C LTR ERVL 241 489 -2 2479 55 14 0 chr5 17812409 17812702 -181817448 - AluSp SINE Alu -16 297 1 1020 276 77 8 chr5 17813247 17813754 -181816396 + L1ME3A LINE L1 4177 4718 -1428 1386 248 31 26 chr5 17813909 17814181 -181815969 + L1ME3A LINE L1 4923 5192 -978 2258 121 98 3 chr5 17814181 17814570 -181815580 - MSTA LTR MaLR -2 426 1 1386 248 31 26 chr5 17814570 17815046 -181815104 + L1ME3A LINE L1 5192 5672 -498 186 43 0 0 chr5 17815133 17815156 -181814994 + (TG)n Simple_repeat Simple_repeat 2 24 0 307 209 60 0 chr5 17815205 17815339 -181814811 + (TA)n Simple_repeat Simple_repeat 2 143 0 1351 203 161 5 chr5 17815340 17815745 -181814405 + L1ME3A LINE L1 5660 6127 -43 324 321 7 15 chr5 17816712 17816849 -181813301 + L1M3c LINE L1 1 136 -6005 * 559 343 40 17 chr5 17816818 17817220 -181812930 + L1M3c LINE L1 13 423 -5718 328 254 55 0 chr5 17817377 17817487 -181812663 + L1M3c LINE L1 814 929 -5212 3747 144 80 38 chr5 17817488 17818313 -181811837 + L1MA10 LINE L1 5472 6331 -3 1858 181 13 10 chr5 17821498 17821807 -181808343 - AluJo SINE Alu -2 310 1 1311 172 65 8 chr5 17822011 17822336 -181807814 - Tigger4(Zombi) DNA MER2_type 0 2731 12 757 138 60 0 chr5 17822634 17822750 -181807400 + FLAM_C SINE Alu 2 124 -9 339 143 0 0 chr5 17822788 17822851 -181807299 + L1MA5A LINE L1 4408 4470 -1676 6401 140 12 15 chr5 17822851 17824717 -181805433 + L1MA5A LINE L1 4435 6291 -6 852 313 60 13 chr5 17825740 17826194 -181803956 - LTR33 LTR ERVL -8 513 39 205 238 95 16 chr5 17828042 17828105 -181802045 + L2 LINE L2 3155 3222 -50 258 267 22 11 chr5 17828418 17828508 -181801642 + MER117 DNA MER1_type 1 91 -106 1140 176 63 4 chr5 17830148 17830386 -181799764 - L1MA4 LINE L1 -11 6289 6038 1356 153 18 0 chr5 17830405 17830627 -181799523 - L1PA16 LINE L1 -9 6157 5932 417 161 86 0 chr5 17830627 17830720 -181799430 - L1MA4 LINE L1 -255 6045 5945 * 1681 181 27 6 chr5 17830718 17831083 -181799067 + L1 LINE L1 4616 4988 -1158 1665 211 48 4 chr5 17831084 17831539 -181798611 - Charlie4a DNA MER1_type 0 508 34 2453 81 0 3 chr5 17831539 17831848 -181798302 - AluSx SINE Alu -4 308 1 2278 118 16 16 chr5 17831874 17832247 -181797903 - THE1C LTR MaLR 0 375 3 394 270 100 91 chr5 17832585 17832826 -181797324 - L2 LINE L2 0 3272 3030 319 368 59 30 chr5 17832910 17833350 -181796800 - L2 LINE L2 -421 2893 2441 449 332 111 9 chr5 17833424 17833767 -181796383 - L2 LINE L2 -1209 2105 1728 1374 239 116 64 chr5 17834154 17834747 -181795403 - MLT1E3 LTR MaLR 0 624 1 912 284 61 19 chr5 17834947 17835306 -181794844 - LTR16B LTR ERVL -81 383 10 593 14 0 0 chr5 17835868 17835940 -181794210 - L1P LINE L1 -3665 2481 2410 290 263 13 0 chr5 17836236 17836312 -181793838 + Charlie8 DNA MER1_type 2341 2417 0 254 340 70 49 chr5 17836440 17836625 -181793525 - L2 LINE L2 -130 3183 2995 318 223 58 29 chr5 17837879 17837966 -181792184 + L1PB4 LINE L1 6046 6138 -28 185 0 40 0 chr5 17837966 17837991 -181792159 + (TA)n Simple_repeat Simple_repeat 2 27 0 318 223 58 29 chr5 17837991 17838006 -181792144 + L1PB4 LINE L1 6138 6151 -15 382 193 211 0 chr5 17838058 17838172 -181791978 - LTR16C LTR ERVL -1 490 353 408 265 66 13 chr5 17838271 17838422 -181791728 - L2 LINE L2 0 3313 3155 1061 202 27 62 chr5 17838434 17838770 -181791380 + MER33 DNA MER1_type 1 324 0 397 224 31 20 chr5 17838796 17838894 -181791256 + MER5A DNA MER1_type 14 112 -77 3648 287 83 68 chr5 17839083 17840187 -181789963 - L2 LINE L2 -262 3051 1914 2204 126 96 18 chr5 17840187 17840584 -181789566 - MSTA LTR MaLR 0 428 1 3648 287 83 68 chr5 17840584 17841281 -181788869 - L2 LINE L2 -1399 1914 1229 249 303 83 7 chr5 17841283 17841428 -181788722 + MLT1J LTR MaLR 1 156 -355 387 0 0 0 chr5 17841545 17841588 -181788562 + (TA)n Simple_repeat Simple_repeat 2 44 0 225 204 20 10 chr5 17841669 17841767 -181788383 + (TA)n Simple_repeat Simple_repeat 2 100 0 755 277 103 5 chr5 17841823 17842270 -181787880 + MLT1G1 LTR MaLR 84 595 0 273 302 108 35 chr5 17842421 17842709 -181787441 + MLT1G1-int LTR MaLR 255 563 -808 364 263 30 126 chr5 17843280 17843586 -181786564 + MLT1G1-int LTR MaLR 1032 1297 -74 2941 160 0 16 chr5 17843586 17844079 -181786071 + MER66B LTR ERV1 1 485 -1 364 263 30 126 chr5 17844079 17844144 -181786006 + MLT1G1-int LTR MaLR 1297 1367 -4 1097 250 44 14 chr5 17844144 17844440 -181785710 + MLT1G1 LTR MaLR 1 305 -290 458 289 7 14 chr5 17844501 17844643 -181785507 + MLT1G1 LTR MaLR 453 593 -2 489 312 69 14 chr5 17844656 17844932 -181785218 - L1MEc LINE L1 -4831 1479 1189 262 154 108 0 chr5 17844993 17845058 -181785092 + L1M4c LINE L1 1266 1337 -5047 249 216 102 0 chr5 17845085 17845173 -181784977 - L1MEc LINE L1 -5123 996 900 304 324 9 0 chr5 17845297 17845408 -181784742 - L1MEc LINE L1 -5448 671 560 464 317 94 64 chr5 17845505 17845940 -181784210 - L1MEc LINE L1 -5663 456 9 185 0 40 0 chr5 17846871 17846896 -181783254 + (TAA)n Simple_repeat Simple_repeat 2 27 0 946 49 16 44 chr5 17847453 17847487 -181782663 + (TTTC)n Simple_repeat Simple_repeat 1 211 0 946 49 16 44 chr5 17847487 17847670 -181782480 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 659 204 0 0 chr5 17847755 17847868 -181782282 - FLAM_A SINE Alu -29 113 1 378 0 0 0 chr5 17848047 17848089 -181782061 + (TA)n Simple_repeat Simple_repeat 1 42 0 1750 161 0 0 chr5 17848142 17848416 -181781734 + AluSx SINE Alu 38 311 -1 827 189 6 47 chr5 17848881 17849073 -181781077 + MLT2C2 LTR ERVL 214 464 0 216 0 0 0 chr5 17849105 17849129 -181781021 + (CA)n Simple_repeat Simple_repeat 2 25 0 204 259 9 17 chr5 17850468 17850584 -181779566 + GA-rich Low_complexity Low_complexity 1 115 0 19437 156 105 14 chr5 17850653 17856145 -181774005 + L1M1 LINE L1 13 6028 -1537 2104 94 0 4 chr5 17856145 17856420 -181773730 + AluSq SINE Alu 40 313 0 2639 171 63 4 chr5 17856425 17856887 -181773263 + MER41D LTR ERV1 63 551 -6 1233 285 93 2 chr5 17856910 17857327 -181772823 - L2 LINE L2 -730 2584 2130 216 322 76 8 chr5 17857320 17857438 -181772712 - MIR SINE MIR -89 173 48 * 279 317 110 37 chr5 17858049 17858213 -181771937 - MIR3 SINE MIR -1 207 32 476 284 85 0 chr5 17858454 17858595 -181771555 + MIR SINE MIR 110 262 0 202 321 51 51 chr5 17858613 17858750 -181771400 + MIR SINE MIR 40 143 -65 24 77 0 0 chr5 17860388 17860440 -181769710 + AT_rich Low_complexity Low_complexity 1 52 0 638 106 10 0 chr5 17860441 17860545 -181769605 - L1PA13 LINE L1 -5 6158 6054 1820 250 88 20 chr5 17861438 17862619 -181767531 + L1MEc LINE L1 1846 3066 -3149 1128 266 155 12 chr5 17862803 17863408 -181766742 + L1MEc LINE L1 3333 4024 -2191 33 0 0 23 chr5 17863428 17863448 -181766702 + AT_rich Low_complexity Low_complexity 1 20 -23 1738 176 0 37 chr5 17863448 17863772 -181766378 - AluSx SINE Alu 0 312 1 33 0 0 23 chr5 17863772 17863795 -181766355 + AT_rich Low_complexity Low_complexity 20 43 0 1355 258 74 27 chr5 17863830 17864384 -181765766 + L1MEc LINE L1 4608 5187 -1028 2025 156 106 14 chr5 17864637 17865054 -181765096 - MLT1D LTR MaLR -10 495 41 1944 136 3 20 chr5 17867178 17867479 -181762671 - AluSq SINE Alu -17 296 1 546 284 124 63 chr5 17867979 17868310 -181761840 + L2 LINE L2 2963 3313 0 314 222 19 28 chr5 17868892 17869000 -181761150 + (TA)n Simple_repeat Simple_repeat 2 108 0 3587 26 0 0 chr5 17869794 17870217 -181759933 - L1PA2 LINE L1 0 6155 5733 408 71 0 0 chr5 17870294 17870350 -181759800 + (TG)n Simple_repeat Simple_repeat 2 57 0 1677 167 70 19 chr5 17870687 17871058 -181759092 + MLT1B LTR MaLR 1 390 0 232 220 20 0 chr5 17871147 17871197 -181758953 + MLT1H LTR MaLR 73 123 -426 * 598 314 29 41 chr5 17871191 17871522 -181758628 + LTR33 LTR ERVL 5 357 -164 2042 122 74 14 chr5 17871522 17871875 -181758275 + THE1C LTR MaLR 2 375 0 598 314 29 41 chr5 17871875 17871987 -181758163 + LTR33 LTR ERVL 357 469 -52 180 0 0 0 chr5 17872100 17872120 -181758030 + (TGG)n Simple_repeat Simple_repeat 3 22 0 830 235 181 91 chr5 17872489 17872548 -181757602 + MLT1H LTR MaLR 1 53 -496 2371 116 11 30 chr5 17872548 17872919 -181757231 - THE1B LTR MaLR 0 364 1 830 235 181 91 chr5 17872919 17873312 -181756838 + MLT1H LTR MaLR 53 534 -15 353 324 7 21 chr5 17873333 17873478 -181756672 - MLT1J LTR MaLR -141 370 228 3593 71 9 4 chr5 17873847 17874314 -181755836 - MER41A LTR ERV1 -85 469 1 13170 86 23 4 chr5 17874314 17876132 -181754018 - MER41A-int LTR ERV1 -2 5944 4092 * 14110 124 84 42 chr5 17876114 17879660 -181750490 - MER41A-int LTR ERV1 -2189 3757 1 21 0 0 0 chr5 17879789 17879810 -181750340 + AT_rich Low_complexity Low_complexity 1 21 0 390 237 52 10 chr5 17880173 17880270 -181749880 - MER5C DNA MER1_type -204 120 20 683 279 66 61 chr5 17880393 17880770 -181749380 - LTR16C LTR ERVL -15 476 98 22 0 0 0 chr5 17881349 17881371 -181748779 + AT_rich Low_complexity Low_complexity 1 22 0 1820 130 61 66 chr5 17881703 17882080 -181748070 + THE1C LTR MaLR 1 375 0 244 217 174 0 chr5 17882355 17882424 -181747726 - MIR SINE MIR -76 186 106 312 294 81 36 chr5 17882961 17883458 -181746692 - L1M4 LINE L1 -1527 4619 4101 757 129 0 0 chr5 17885026 17885142 -181745008 + AluY SINE Alu 194 309 -2 2434 90 0 0 chr5 17885291 17885601 -181744549 - AluSx SINE Alu -2 310 1 248 292 136 58 chr5 17886591 17886899 -181743251 + MLT1K LTR MaLR 210 541 -47 24 0 0 0 chr5 17886921 17886945 -181743205 + AT_rich Low_complexity Low_complexity 1 24 0 249 174 0 0 chr5 17886971 17887017 -181743133 + L2 LINE L2 2998 3043 -229 238 255 0 0 chr5 17887780 17887831 -181742319 + (CA)n Simple_repeat Simple_repeat 2 52 0 593 314 74 35 chr5 17888086 17888369 -181741781 - L2 LINE L2 -1074 2240 1947 3970 221 46 25 chr5 17888375 17889787 -181740363 + L1M4 LINE L1 3119 4574 -2991 2312 111 19 6 chr5 17889818 17890177 -181739973 + L1PB1 LINE L1 5788 6151 0 1577 329 86 32 chr5 17890196 17891338 -181738812 - L2 LINE L2 -1362 1952 750 396 269 186 84 chr5 17891338 17891672 -181738478 - L2 LINE L2 -2825 489 122 364 337 151 12 chr5 17892763 17892929 -181737221 + MIR3 SINE MIR 9 197 -11 309 293 84 19 chr5 17892987 17893202 -181736948 + L1ME LINE L1 5383 5611 -510 395 91 0 15 chr5 17893288 17893354 -181736796 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 21 0 0 0 chr5 17893509 17893530 -181736620 + AT_rich Low_complexity Low_complexity 1 21 0 193 330 50 20 chr5 17893546 17893646 -181736504 - L2 LINE L2 0 3313 3211 243 0 0 0 chr5 17893721 17893748 -181736402 + (T)n Simple_repeat Simple_repeat 1 27 0 564 332 19 5 chr5 17893748 17893953 -181736197 - L2 LINE L2 -251 3062 2855 1044 267 26 114 chr5 17894067 17894708 -181735442 - L2 LINE L2 -458 2856 2272 1210 281 53 41 chr5 17895683 17896171 -181733979 - MLT1K LTR MaLR -4 584 91 1439 187 79 50 chr5 17896174 17896553 -181733597 - MLT1B LTR MaLR 0 390 1 446 318 46 0 chr5 17897178 17897351 -181732799 + LTR16A LTR ERVL 1 181 -269 248 212 91 15 chr5 17897368 17897500 -181732650 + L1M4 LINE L1 5651 5792 -1773 2951 312 44 21 chr5 17897860 17899636 -181730514 - HERV16 LTR ERVL -3085 1911 1 1050 312 122 15 chr5 17899642 17900043 -181730107 - LTR16A LTR ERVL -6 444 1 1098 120 0 13 chr5 17900081 17900239 -181729911 - AluSg/x SINE Alu -1 311 156 338 308 68 27 chr5 17900282 17900574 -181729576 - L1M4 LINE L1 -5128 1414 1111 27 0 0 0 chr5 17900959 17900986 -181729164 + AT_rich Low_complexity Low_complexity 1 27 0 1456 124 42 0 chr5 17900990 17901231 -181728919 - L1MA5A LINE L1 -9 6288 6038 417 312 108 19 chr5 17901343 17901500 -181728650 + MER91A DNA MER1_type 1 171 -25 523 347 134 48 chr5 17902297 17902654 -181727496 + L2 LINE L2 2877 3264 -8 1266 163 30 72 chr5 17902746 17903010 -181727140 + AluJo SINE Alu 1 253 -59 7697 204 60 6 chr5 17903236 17906097 -181724053 - L1MB4 LINE L1 -2 6676 3659 1999 161 3 0 chr5 17906136 17906447 -181723703 - AluJb SINE Alu 0 312 1 4806 226 99 20 chr5 17906454 17908321 -181721829 - L1MB4 LINE L1 -3773 2871 802 381 282 69 42 chr5 17908667 17908883 -181721267 - L1MB4 LINE L1 -6320 222 1 198 0 0 0 chr5 17908890 17908912 -181721238 + (T)n Simple_repeat Simple_repeat 1 22 0 1186 171 60 51 chr5 17910092 17910400 -181719750 - L1PB4 LINE L1 -7 6149 5841 21 71 0 0 chr5 17913021 17913063 -181717087 + AT_rich Low_complexity Low_complexity 1 42 0 1606 171 193 11 chr5 17916460 17916822 -181713328 + MSTA LTR MaLR 1 428 0 8401 146 10 41 chr5 17916825 17918265 -181711885 + MSTA-int LTR MaLR 4 1399 -181 563 206 0 0 chr5 17918440 17918537 -181711613 - Tigger7 DNA MER2_type -1 2486 2390 1526 201 15 0 chr5 17918538 17918801 -181711349 - Tigger7 DNA MER2_type -466 267 1 187 250 132 29 chr5 17918859 17918927 -181711223 + L2 LINE L2 3194 3268 -4 992 227 9 14 chr5 17918996 17919216 -181710934 + MER20 DNA MER1_type 1 219 0 1256 158 35 0 chr5 17921668 17921922 -181708228 - L1MA9 LINE L1 -6 6306 6044 25 90 0 0 chr5 17922050 17922117 -181708033 + AT_rich Low_complexity Low_complexity 1 67 0 223 250 0 0 chr5 17922914 17922958 -181707192 + polypurine Low_complexity Low_complexity 1 44 0 904 296 96 39 chr5 17923486 17924011 -181706139 + L2 LINE L2 2757 3311 -2 772 256 55 0 chr5 17924117 17924316 -181705834 - MER63A DNA MER1_type 0 210 1 374 345 9 0 chr5 17924338 17924451 -181705699 + MIR SINE MIR 36 149 -59 364 329 48 17 chr5 17924717 17925009 -181705141 - L1MEc LINE L1 -2469 3746 3446 207 162 0 0 chr5 17925638 17925675 -181704475 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 301 196 0 0 chr5 17925679 17925735 -181704415 - L1MC4 LINE L1 -1339 6703 6648 378 215 81 13 chr5 17925800 17925949 -181704201 - L1MEc LINE L1 -3784 2431 2273 330 280 82 48 chr5 17926241 17926448 -181703702 - L1MEc LINE L1 -4567 1829 1616 302 376 8 8 chr5 17926741 17926858 -181703292 - L2 LINE L2 -5 3308 3192 235 219 16 47 chr5 17927131 17927195 -181702955 - L1P LINE L1 -3276 2870 2809 497 271 54 50 chr5 17927361 17927641 -181702509 - MLT1J LTR MaLR 0 511 231 236 279 15 0 chr5 17927688 17927756 -181702394 - MLT1L LTR MaLR -342 273 205 1214 256 0 6 chr5 17928627 17928963 -181701187 - L1PB1 LINE L1 -1017 5129 4796 * 5882 107 9 0 chr5 17928956 17929907 -181700243 + L1PB1 LINE L1 5147 6104 -47 202 106 43 21 chr5 17930341 17930388 -181699762 + GA-rich Low_complexity Low_complexity 2 49 0 241 301 215 22 chr5 17930402 17930718 -181699432 - L2 LINE L2 -635 2679 2303 236 258 113 0 chr5 17930771 17930833 -181699317 - L2 LINE L2 0 3313 3245 304 343 87 18 chr5 17931145 17931364 -181698786 + MIR SINE MIR 2 235 -27 547 338 97 25 chr5 17931399 17931923 -181698227 - L2 LINE L2 -1225 2089 1528 383 242 20 10 chr5 17933995 17934094 -181696056 - MER103 DNA DNA -64 102 3 1996 118 4 0 chr5 17935590 17935853 -181694297 - AluSp SINE Alu -47 266 3 345 267 109 43 chr5 17936043 17936368 -181693782 + MLT1J2 LTR MaLR 1 448 -2 296 341 10 73 chr5 17937060 17937265 -181692885 + MIR SINE MIR 23 214 -48 241 280 0 0 chr5 17938345 17938395 -181691755 + (CGTG)n Simple_repeat Simple_repeat 4 53 0 343 279 27 23 chr5 17938471 17938665 -181691485 + L1M4b LINE L1 -533 4294967217 -6359 730 164 62 69 chr5 17938741 17938910 -181691240 - MLT1A1 LTR MaLR 0 365 212 416 271 5 145 chr5 17939382 17939596 -181690554 + MER5A DNA MER1_type 3 186 -3 1280 232 42 10 chr5 17940338 17940721 -181689429 + MER114 LTR ERV 7 401 -247 895 311 37 63 chr5 17940789 17941252 -181688898 + L1M4b LINE L1 175 625 -5688 272 271 59 12 chr5 17941236 17941321 -181688829 + L1M4b LINE L1 985 1073 -5240 * 3229 219 33 7 chr5 17941530 17942364 -181687786 + L1M4b LINE L1 777 1783 -4530 42 20 0 0 chr5 17942413 17942462 -181687688 + AT_rich Low_complexity Low_complexity 1 49 0 417 188 0 0 chr5 17942462 17942547 -181687603 + (TA)n Simple_repeat Simple_repeat 2 86 0 246 276 23 0 chr5 17942548 17942635 -181687515 - L1MC4 LINE L1 -1339 6703 6615 307 173 0 0 chr5 17942640 17942692 -181687458 - L1MC4 LINE L1 -1339 6703 6652 957 218 120 61 chr5 17943000 17943368 -181686782 + MLT1G1 LTR MaLR 1 357 -185 786 196 5 43 chr5 17943823 17944007 -181686143 - MER5B DNA MER1_type 0 178 2 2647 158 22 16 chr5 17944129 17944577 -181685573 + LTR32 LTR ERVL 21 471 0 525 302 108 26 chr5 17944641 17945019 -181685131 + MLT1I LTR MaLR 1 409 0 1883 214 77 36 chr5 17946119 17946653 -181683497 - MER74A LTR ERVL -2 556 1 1423 257 70 23 chr5 17946729 17947204 -181682946 - MLT1F1 LTR MaLR 0 567 71 292 209 236 18 chr5 17947505 17947553 -181682597 + MER94 DNA DNA 1 37 -97 2566 107 6 11 chr5 17947553 17947919 -181682231 + THE1B LTR MaLR 1 364 0 292 209 236 18 chr5 17947919 17947980 -181682170 + MER94 DNA DNA 37 134 0 43353 37 24 2 chr5 17948603 17954159 -181675991 + L1P1 LINE L1 13 5697 -458 1184 107 42 56 chr5 17954666 17954881 -181675269 + L1PA2 LINE L1 5944 6155 0 2383 94 0 0 chr5 17955317 17955614 -181674536 - AluY SINE Alu -14 297 1 264 231 22 22 chr5 17956422 17956513 -181673637 + MLT1H LTR MaLR 68 137 -272 1212 221 71 69 chr5 17956535 17956928 -181673222 + MSTD LTR MaLR 3 396 0 291 214 32 117 chr5 17957054 17957208 -181672942 + MLT1H LTR MaLR 405 545 -4 1622 210 25 33 chr5 17957354 17957716 -181672434 + MLT1A1 LTR MaLR 2 360 -5 5651 88 12 7 chr5 17958341 17959092 -181671058 + L1PA13 LINE L1 5408 6162 -1 324 358 127 19 chr5 17959405 17959721 -181670429 - L2 LINE L2 -461 2853 2504 330 26 0 0 chr5 17960889 17960928 -181669222 + (TG)n Simple_repeat Simple_repeat 2 40 0 627 206 0 79 chr5 17961285 17961332 -181668818 + MER96B DNA MER1_type? 1 50 -367 1480 213 62 58 chr5 17961332 17961797 -181668353 + MLT1C LTR MaLR 1 467 0 627 206 0 79 chr5 17961797 17961938 -181668212 + MER96B DNA MER1_type? 50 174 -243 225 0 0 0 chr5 17965419 17965444 -181664706 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1820 166 57 38 chr5 17966565 17966932 -181663218 - MLT1A2 LTR MaLR 0 374 1 259 83 0 0 chr5 17966955 17966991 -181663159 + L2 LINE L2 3025 3060 -212 1934 155 8 20 chr5 17967296 17967678 -181662472 - Tigger3(Golem) DNA MER2_type 0 3029 4 21 0 0 0 chr5 17967709 17967730 -181662420 + AT_rich Low_complexity Low_complexity 1 21 0 450 196 122 14 chr5 17968242 17968390 -181661760 + MER5C DNA MER1_type 127 290 -34 1093 170 100 5 chr5 17968807 17969007 -181661143 - MER20 DNA MER1_type 0 219 1 306 287 49 25 chr5 17969032 17969154 -181660996 - MIR SINE MIR -93 169 45 45053 36 0 3 chr5 17969371 17975578 -181654572 + L1PA3 LINE L1 1 6191 0 343 305 21 0 chr5 17975747 17975888 -181654262 - L1ME4a LINE L1 -229 5892 5749 186 222 111 0 chr5 17975944 17975989 -181654161 - MIR SINE MIR -40 222 173 2044 114 0 11 chr5 17976490 17976771 -181653379 + AluSx SINE Alu 22 299 -13 273 296 52 37 chr5 17977418 17977553 -181652597 + MER117 DNA MER1_type 3 139 -58 1927 248 48 39 chr5 17978176 17978996 -181651154 - Charlie2 DNA MER1_type -11 2851 2025 2509 61 3 0 chr5 17979177 17979473 -181650677 + AluSp SINE Alu 7 303 -10 25 0 0 0 chr5 17979828 17979853 -181650297 + AT_rich Low_complexity Low_complexity 1 25 0 2230 160 8 14 chr5 17979936 17980299 -181649851 + MLT1A1 LTR MaLR 5 365 0 317 159 0 14 chr5 17980861 17980930 -181649220 + (TG)n Simple_repeat Simple_repeat 2 69 0 654 332 50 55 chr5 17981172 17981757 -181648393 + MERVL LTR ERVL 3617 4405 -798 322 354 137 15 chr5 17981769 17982032 -181648118 - L2 LINE L2 -566 2748 2454 30 0 0 0 chr5 17983127 17983157 -181646993 + AT_rich Low_complexity Low_complexity 1 30 0 315 305 138 20 chr5 17983665 17983868 -181646282 + L1ME LINE L1 5352 5525 -641 1872 199 5 39 chr5 17983882 17983909 -181646241 - MLT2D LTR ERVL -16 398 372 504 0 0 0 chr5 17983909 17983965 -181646185 + (TG)n Simple_repeat Simple_repeat 2 57 0 1872 199 5 39 chr5 17983965 17984349 -181645801 - MLT2D LTR ERVL -42 372 1 324 278 0 21 chr5 17984351 17984448 -181645702 + L1ME LINE L1 5613 5707 -463 377 304 149 5 chr5 17984849 17985050 -181645100 + L2 LINE L2 2468 2697 -617 972 180 115 0 chr5 17985058 17985241 -181644909 - MER3 DNA MER1_type 0 209 6 799 295 41 62 chr5 17985248 17985583 -181644567 + L2 LINE L2 2712 3027 -286 2074 136 88 31 chr5 17985583 17986002 -181644148 + MER65A LTR ERV1 3 445 0 799 295 41 62 chr5 17986002 17986274 -181643876 + L2 LINE L2 3027 3303 -10 201 293 82 48 chr5 17986599 17986807 -181643343 - L2 LINE L2 -1284 2030 1816 2250 109 0 0 chr5 17986850 17987143 -181643007 + AluSx SINE Alu 1 293 -19 2279 193 24 74 chr5 17987223 17987517 -181642633 - MER21B LTR ERV1 -3 860 553 1730 145 19 0 chr5 17987517 17987779 -181642371 + AluJb SINE Alu 2 268 -44 2279 193 24 74 chr5 17987779 17987794 -181642356 - MER21B LTR ERV1 -310 553 539 207 0 0 0 chr5 17987794 17987817 -181642333 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2279 193 24 74 chr5 17987817 17988060 -181642090 - MER21B LTR ERV1 -324 539 335 6561 91 2 0 chr5 17988060 17988902 -181641248 + THE1B-int LTR MaLR 737 1580 0 2272 141 30 25 chr5 17988902 17989264 -181640886 + THE1B LTR MaLR 1 364 0 261 337 0 12 chr5 17989755 17989841 -181640309 + L2 LINE L2 3186 3270 -2 1588 218 22 14 chr5 17989983 17990341 -181639809 - MLT1H1 LTR MaLR 0 555 195 639 229 6 60 chr5 17990341 17990524 -181639626 + MER20 DNA MER1_type 3 175 -44 277 228 129 30 chr5 17990545 17990646 -181639504 - MLT1H1 LTR MaLR -351 204 95 277 277 128 14 chr5 17990649 17990790 -181639360 - MLT1G1 LTR MaLR -438 157 1 453 276 32 19 chr5 17991422 17991578 -181638572 + Charlie8 DNA MER1_type 62 219 -2198 249 119 0 0 chr5 17991683 17991725 -181638425 + (TAA)n Simple_repeat Simple_repeat 2 43 0 383 297 77 46 chr5 17991966 17992161 -181637989 + MLT1H LTR MaLR 119 319 -230 353 244 8 32 chr5 17992293 17992416 -181637734 - L1MC5 LINE L1 -36 7925 7806 1765 169 7 0 chr5 17992931 17993221 -181636929 - AluSx SINE Alu -20 292 1 1178 239 84 22 chr5 17993293 17993698 -181636452 - L1MC/D LINE L1 -2000 5808 5379 294 183 37 0 chr5 17993698 17993780 -181636370 + (TA)n Simple_repeat Simple_repeat 2 86 0 198 71 0 0 chr5 17993781 17993809 -181636341 + (TCTA)n Simple_repeat Simple_repeat 3 30 0 648 222 86 56 chr5 17993813 17993975 -181636175 - AluJb SINE Alu -23 289 123 1272 285 87 25 chr5 17994079 17994563 -181635587 - MER34 LTR ERV1 0 542 29 600 247 0 20 chr5 17995476 17995622 -181634528 - LTR67 LTR ERVL -5 552 410 1325 262 91 29 chr5 17995914 17996398 -181633752 + MLT1E LTR MaLR 75 588 -5 189 121 0 0 chr5 17996479 17996512 -181633638 + (A)n Simple_repeat Simple_repeat 1 33 0 417 110 55 0 chr5 17997148 17997221 -181632929 - L1M4 LINE L1 -3172 2974 2898 448 276 97 21 chr5 17997454 17997599 -181632551 - MIR SINE MIR -70 192 37 2199 107 48 46 chr5 17998306 17998679 -181631471 - THE1C LTR MaLR -1 374 1 21 82 0 0 chr5 17998771 17998820 -181631330 + AT_rich Low_complexity Low_complexity 1 49 0 34 55 0 0 chr5 17998909 17998964 -181631186 + AT_rich Low_complexity Low_complexity 1 55 0 20793 151 8 9 chr5 17999552 18004483 -181625667 - L1PA11 LINE L1 -2 7610 2680 1785 122 131 24 chr5 18004483 18004812 -181625338 + THE1B LTR MaLR 1 364 0 11315 89 4 0 chr5 18004812 18006368 -181623782 + THE1B-int LTR MaLR 1 1562 -18 4434 210 15 41 chr5 18006375 18007405 -181622745 - L1PA11 LINE L1 -6576 1005 3 432 217 42 28 chr5 18007440 18007583 -181622567 - L1MA9 LINE L1 -25 6287 6143 1028 148 0 13 chr5 18007589 18007744 -181622406 + AluJb SINE Alu 142 294 -18 1256 172 96 98 chr5 18008047 18008413 -181621737 + MLT1A1 LTR MaLR 1 365 0 1512 190 133 12 chr5 18008419 18008819 -181621331 + MER39 LTR ERV1 260 707 0 419 307 101 51 chr5 18008829 18009204 -181620946 + L1ME LINE L1 5394 5665 -456 737 236 39 0 chr5 18009205 18009387 -181620763 + AluJo SINE Alu 120 308 -4 1060 125 20 50 chr5 18010200 18010400 -181619750 - MER31A LTR ERV1 -291 194 1 708 139 23 8 chr5 18011125 18011254 -181618896 - MER20 DNA MER1_type -59 160 30 477 165 72 0 chr5 18011863 18011960 -181618190 - MER58C DNA MER1_type 0 215 112 233 174 0 0 chr5 18012128 18012174 -181617976 + MER39 LTR ERV1 1 46 -661 290 291 39 0 chr5 18012201 18012333 -181617817 + MER39 LTR ERV1 115 387 -320 3271 28 0 3 chr5 18012348 18012736 -181617414 - L1PA5 LINE L1 -12 6142 5756 2194 95 3 10 chr5 18013494 18013790 -181616360 - AluSx SINE Alu -14 298 5 226 211 28 70 chr5 18014220 18014291 -181615859 - L2 LINE L2 -4 3268 3201 628 109 10 0 chr5 18014716 18014817 -181615333 - L1MB4 LINE L1 -2 6178 6077 619 273 66 0 chr5 18014934 18015176 -181614974 + MIR SINE MIR 5 262 0 297 319 7 44 chr5 18015267 18015402 -181614748 - L2 LINE L2 -1 3312 3183 1195 171 0 5 chr5 18016178 18016377 -181613773 - AluJb SINE Alu -8 304 107 228 290 32 0 chr5 18016441 18016503 -181613647 + L2 LINE L2 2985 3048 -224 217 380 36 36 chr5 18017613 18017750 -181612400 - L2 LINE L2 0 3272 3136 2209 97 0 35 chr5 18018693 18019003 -181611147 - AluSq SINE Alu -14 299 1 921 289 81 41 chr5 18019067 18019556 -181610594 - L2 LINE L2 -345 2927 2421 221 313 30 0 chr5 18020780 18020847 -181609303 + MIR SINE MIR 74 142 -120 329 313 104 65 chr5 18021498 18022088 -181608062 + L1M2 LINE L1 790 1254 -5595 210 37 0 0 chr5 18022278 18022305 -181607845 + (CCG)n Simple_repeat Simple_repeat 1 27 0 305 271 170 90 chr5 18022308 18022812 -181607338 - L1M2 LINE L1 -5827 1022 525 861 254 37 18 chr5 18026116 18026333 -181603817 - MIR SINE MIR -34 228 8 790 275 140 25 chr5 18026470 18026914 -181603236 - MLT1G1 LTR MaLR -11 584 90 594 331 6 0 chr5 18027823 18027995 -181602155 + MIR SINE MIR 84 256 -6 1010 227 106 11 chr5 18030042 18030324 -181599826 - MER58B DNA MER1_type -1 340 32 1328 13 0 0 chr5 18030503 18030676 -181599474 + L1PA2 LINE L1 5992 6164 0 348 285 66 40 chr5 18033893 18034044 -181596106 - L2 LINE L2 -1 3312 3158 1122 232 37 92 chr5 18034099 18034587 -181595563 + MLT2B1 LTR ERVL 1 461 -59 198 0 0 0 chr5 18034587 18034609 -181595541 + (CA)n Simple_repeat Simple_repeat 2 23 0 503 177 0 0 chr5 18034618 18034697 -181595453 + Tigger5 DNA MER2_type 1 79 -2244 236 244 0 0 chr5 18034789 18034834 -181595316 + (CA)n Simple_repeat Simple_repeat 1 45 0 291 146 0 0 chr5 18034834 18034882 -181595268 + MLT2D LTR ERVL 367 414 0 270 294 0 0 chr5 18034885 18034970 -181595180 + L1MC3 LINE L1 6487 6571 -1214 208 283 12 24 chr5 18034979 18035145 -181595005 + (TA)n Simple_repeat Simple_repeat 1 164 0 2350 181 145 124 chr5 18035397 18035854 -181594296 + L1MC3 LINE L1 6583 7029 -756 284 56 0 0 chr5 18035854 18035890 -181594260 + tRNA-Gly-GGG tRNA tRNA 1 36 -38 2350 181 145 124 chr5 18035890 18035904 -181594246 + L1MC3 LINE L1 7029 7041 -744 246 219 151 0 chr5 18035904 18035977 -181594173 + MLT1F1 LTR MaLR 36 119 -448 2350 181 145 124 chr5 18035977 18036559 -181593591 + L1MC3 LINE L1 7041 7768 -17 537 313 156 8 chr5 18036602 18037078 -181593072 - L2 LINE L2 -248 3065 2508 700 204 20 70 chr5 18037327 18037528 -181592622 - MLT1A1 LTR MaLR -174 191 1 582 220 24 6 chr5 18037528 18037696 -181592454 - L1M4 LINE L1 -3763 2383 2213 268 308 117 25 chr5 18038201 18038321 -181591829 + MIR SINE MIR 2 132 -130 434 284 101 51 chr5 18038475 18038732 -181591418 - L2 LINE L2 0 3313 3044 21 0 0 0 chr5 18039095 18039116 -181591034 + AT_rich Low_complexity Low_complexity 1 21 0 1238 56 0 12 chr5 18040041 18040203 -181589947 + L1PA5 LINE L1 5989 6148 -6 23 33 0 0 chr5 18040786 18040816 -181589334 + AT_rich Low_complexity Low_complexity 1 30 0 267 187 58 23 chr5 18040816 18041037 -181589113 + (TA)n Simple_repeat Simple_repeat 1 228 0 21 57 0 0 chr5 18042033 18042068 -181588082 + AT_rich Low_complexity Low_complexity 1 35 0 268 207 0 0 chr5 18042068 18042126 -181588024 + Charlie1 DNA MER1_type 2180 2237 -524 984 164 11 5 chr5 18042141 18042330 -181587820 - L1MA8 LINE L1 -6 6285 6096 1546 72 36 18 chr5 18042330 18042551 -181587599 + L1PA10 LINE L1 5942 6167 -1 4954 176 80 3 chr5 18042553 18044185 -181585965 - L1MA4 LINE L1 -180 6120 4349 1827 162 55 0 chr5 18044278 18044606 -181585544 + MER7A DNA MER2_type 1 344 -2 197 273 55 0 chr5 18045456 18045511 -181584639 - MIR SINE MIR 0 262 205 28 0 0 0 chr5 18045805 18045833 -181584317 + AT_rich Low_complexity Low_complexity 1 28 0 398 277 73 55 chr5 18046315 18046589 -181583561 - L1MC/D LINE L1 -2213 5595 5317 310 280 84 38 chr5 18046772 18047011 -181583139 - L1MC/D LINE L1 -3314 2832 2583 966 240 68 84 chr5 18047086 18047599 -181582551 - MLT1J LTR MaLR -2 509 5 515 85 12 0 chr5 18048069 18048151 -181581999 + (CA)n Simple_repeat Simple_repeat 2 84 0 438 282 26 48 chr5 18048343 18048570 -181581580 + L1MC/D LINE L1 5602 5823 -298 1257 264 49 3 chr5 18049584 18049951 -181580199 - L1ME3 LINE L1 -1 6161 5778 501 290 0 26 chr5 18050073 18050228 -181579922 - MLT1H LTR MaLR -377 172 22 634 255 31 0 chr5 18050245 18050406 -181579744 - L1ME3 LINE L1 -545 5625 5460 232 232 0 0 chr5 18050934 18050990 -181579160 + (TCTCTG)n Simple_repeat Simple_repeat 2 57 0 619 265 55 38 chr5 18052266 18052504 -181577646 + MIR SINE MIR 15 256 -6 212 143 0 0 chr5 18052789 18052824 -181577326 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 186 222 22 0 chr5 18053152 18053197 -181576953 - L3 LINE CR1 -16 1561 1516 184 264 139 14 chr5 18053193 18053265 -181576885 - MIR SINE MIR -112 96 16 * 1180 176 106 100 chr5 18054202 18054561 -181575589 - MLT1A1 LTR MaLR -4 361 1 505 246 8 25 chr5 18054562 18054684 -181575466 - L1MC3 LINE L1 -535 7250 7131 328 312 71 24 chr5 18055555 18055725 -181574425 - MIR SINE MIR 0 262 85 2139 76 0 129 chr5 18056730 18057086 -181573064 + AluSp SINE Alu 1 310 -3 216 0 0 0 chr5 18057986 18058010 -181572140 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 318 232 121 10 chr5 18058418 18058517 -181571633 + L2 LINE L2 3190 3299 -14 215 163 82 0 chr5 18058801 18058850 -181571300 + MIR SINE MIR 209 261 -1 228 273 82 59 chr5 18059033 18059253 -181570897 - L1 LINE L1 -2379 3767 3543 445 289 88 63 chr5 18059447 18059845 -181570305 - L1 LINE L1 -2999 3147 2740 308 345 49 30 chr5 18060020 18060287 -181569863 - L1 LINE L1 -3653 2493 2222 2691 120 3 8 chr5 18060287 18060653 -181569497 - THE1B LTR MaLR 0 364 1 10996 120 25 26 chr5 18060653 18062231 -181567919 - THE1B-int LTR MaLR 0 1580 5 2189 145 14 19 chr5 18062234 18062600 -181567550 - THE1B LTR MaLR 0 364 1 25 51 0 0 chr5 18062713 18062752 -181567398 + AT_rich Low_complexity Low_complexity 1 39 0 318 87 0 0 chr5 18063274 18063320 -181566830 + (TG)n Simple_repeat Simple_repeat 1 46 0 198 0 0 0 chr5 18063319 18063341 -181566809 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 454 249 142 31 chr5 18063341 18063602 -181566548 - L1ME4a LINE L1 -84 6037 5748 806 210 160 70 chr5 18063768 18064095 -181566055 - MSTD LTR MaLR -10 386 1 400 274 55 33 chr5 18064119 18064387 -181565763 - L1ME4a LINE L1 -775 5569 5290 1356 139 86 0 chr5 18064405 18064614 -181565536 - MER30 DNA MER1_type 0 230 4 234 91 0 0 chr5 18064652 18064685 -181565465 + (TG)n Simple_repeat Simple_repeat 2 34 0 1364 230 168 59 chr5 18064728 18065223 -181564927 - MLT1H LTR MaLR 0 549 1 502 307 68 6 chr5 18066684 18066860 -181563290 - MIR3 SINE MIR -15 193 7 294 29 0 0 chr5 18068131 18068166 -181561984 + (TG)n Simple_repeat Simple_repeat 2 36 0 201 133 0 0 chr5 18069638 18069668 -181560482 + (CA)n Simple_repeat Simple_repeat 1 30 0 341 362 7 7 chr5 18070439 18070580 -181559570 - LTR33 LTR ERVL -270 251 111 379 0 0 38 chr5 18072777 18072830 -181557320 + (CA)n Simple_repeat Simple_repeat 2 52 0 1117 276 59 10 chr5 18073224 18073630 -181556520 + Charlie7 DNA MER1_type 261 686 -1926 1898 168 32 69 chr5 18074912 18075317 -181554833 - MLT1B LTR MaLR 0 390 1 850 326 84 26 chr5 18075481 18075910 -181554240 - L2 LINE L2 -5 3308 2855 1271 205 266 7 chr5 18075912 18076314 -181553836 - MLT1H LTR MaLR 0 549 1 520 268 102 61 chr5 18076314 18076609 -181553541 - L2 LINE L2 -456 2858 2552 366 286 64 36 chr5 18076639 18076779 -181553371 + L2 LINE L2 3168 3311 -2 1762 112 14 22 chr5 18077540 18077818 -181552332 - AluSx SINE Alu 0 312 37 380 348 43 19 chr5 18078092 18078302 -181551848 + L2 LINE L2 2270 2484 -830 269 329 172 20 chr5 18078315 18078716 -181551434 + L2 LINE L2 2619 3069 -203 785 188 0 0 chr5 18078963 18079096 -181551054 - FLAM_A SINE Alu 0 133 1 2375 88 3 0 chr5 18080780 18081074 -181549076 + AluSq SINE Alu 3 297 -16 950 147 0 0 chr5 18081915 18082044 -181548106 + FLAM_C SINE Alu 1 129 -4 3078 112 73 36 chr5 18082490 18083051 -181547099 + L1MA4 LINE L1 5713 6294 -6 1532 169 156 29 chr5 18083663 18083977 -181546173 - THE1A LTR MaLR -1 354 1 10467 91 7 94 chr5 18083977 18085707 -181544443 - THE1B-int LTR MaLR 0 1580 1 2072 122 96 35 chr5 18085707 18086050 -181544100 - THE1B LTR MaLR 0 364 1 343 193 121 0 chr5 18086205 18086288 -181543862 + MIR3 SINE MIR 77 169 -39 30 45 0 0 chr5 18086601 18086645 -181543505 + AT_rich Low_complexity Low_complexity 1 44 0 3337 212 87 16 chr5 18086943 18087713 -181542437 - MER21B LTR ERV1 -17 846 22 342 0 0 0 chr5 18087714 18087752 -181542398 + (TG)n Simple_repeat Simple_repeat 2 39 0 361 234 114 0 chr5 18087784 18087920 -181542230 - MIR SINE MIR -62 146 27 4975 126 34 68 chr5 18088455 18089310 -181540840 - LTR1B LTR ERV1 0 826 1 1202 205 23 5 chr5 18090011 18090197 -181539953 - MER20 DNA MER1_type 0 219 27 180 0 0 0 chr5 18090197 18090217 -181539933 + (TAGGG)n Simple_repeat Simple_repeat 1 20 0 1202 205 23 5 chr5 18090217 18090245 -181539905 - MER20 DNA MER1_type -192 27 1 205 349 63 0 chr5 18090401 18090464 -181539686 - L2 LINE L2 -85 3187 3121 426 251 184 39 chr5 18091861 18091910 -181538240 - MIR SINE MIR -11 251 210 261 0 0 0 chr5 18091910 18091939 -181538211 + (TG)n Simple_repeat Simple_repeat 2 30 0 426 251 184 39 chr5 18091939 18092096 -181538054 - MIR SINE MIR -52 210 15 208 139 0 0 chr5 18092117 18092153 -181537997 + (A)n Simple_repeat Simple_repeat 1 36 0 729 129 22 29 chr5 18092360 18092499 -181537651 - L1MB8 LINE L1 -6 6172 6035 276 227 15 0 chr5 18092639 18092705 -181537445 - MIR3 SINE MIR -16 192 126 573 258 92 37 chr5 18092812 18093298 -181536852 - MLT1G1 LTR MaLR -40 515 1 518 279 29 0 chr5 18093896 18094036 -181536114 - LTR1B LTR ERV1 -8 818 675 1798 208 129 15 chr5 18094084 18094555 -181535595 - LTR1B LTR ERV1 -301 525 1 1178 57 0 0 chr5 18095469 18095609 -181534541 - AluY SINE Alu -20 291 152 2742 267 75 29 chr5 18097895 18098065 -181532085 - L1M4 LINE L1 -1646 4500 4339 2227 115 0 3 chr5 18098065 18098369 -181531781 - AluSx SINE Alu -9 303 1 2742 267 75 29 chr5 18098369 18099353 -181530797 - L1M4 LINE L1 -1807 4339 3292 210 316 77 48 chr5 18101114 18101282 -181528868 - L2 LINE L2 -175 3097 2925 1109 217 4 17 chr5 18101720 18101950 -181528200 + MIR SINE MIR 1 227 -35 27 49 0 0 chr5 18101977 18102018 -181528132 + AT_rich Low_complexity Low_complexity 1 41 0 312 120 0 0 chr5 18102259 18102309 -181527841 + (CA)n Simple_repeat Simple_repeat 2 51 0 195 42 0 0 chr5 18104049 18104073 -181526077 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1541 68 41 0 chr5 18104073 18104294 -181525856 - L1PA8 LINE L1 -22 6150 5921 180 163 0 0 chr5 18104591 18104634 -181525516 + GA-rich Low_complexity Low_complexity 1 43 0 572 179 86 0 chr5 18106713 18106830 -181523320 + MER5A DNA MER1_type 61 187 -2 274 227 231 28 chr5 18106854 18106959 -181523191 + MIR SINE MIR 31 141 -67 204 216 0 0 chr5 18107190 18107227 -181522923 + CT-rich Low_complexity Low_complexity 4 40 0 275 394 117 0 chr5 18108397 18108534 -181521616 - L2 LINE L2 -9 3263 3111 719 216 122 0 chr5 18109149 18109330 -181520820 + MER3 DNA MER1_type 1 203 -6 237 143 71 0 chr5 18109293 18109335 -181520815 - MER3 DNA MER1_type -119 90 46 * 229 305 8 31 chr5 18110672 18110800 -181519350 - L1ME LINE L1 -334 5787 5663 2451 57 40 0 chr5 18110838 18111136 -181519014 - AluY SINE Alu 0 311 2 22 35 0 0 chr5 18111375 18111404 -181518746 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr5 18111589 18111619 -181518531 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5 18112023 18112051 -181518099 + AT_rich Low_complexity Low_complexity 1 28 0 2254 118 0 0 chr5 18112142 18112447 -181517703 - AluSx SINE Alu -7 305 1 1169 231 111 0 chr5 18115245 18115552 -181514598 + MER58B DNA MER1_type 1 341 0 685 293 67 9 chr5 18118419 18118644 -181511506 - MIR SINE MIR 0 262 25 405 303 43 32 chr5 18119980 18120168 -181509982 + MIR3 SINE MIR 2 191 -17 203 349 75 0 chr5 18121640 18121746 -181508404 - L2 LINE L2 -827 2487 2374 2563 220 9 5 chr5 18122344 18122986 -181507164 - L1 LINE L1 -2890 3256 2612 233 226 38 9 chr5 18123223 18123329 -181506821 + (TA)n Simple_repeat Simple_repeat 1 109 0 977 190 7 108 chr5 18124214 18124312 -181505838 - MLT1A2 LTR MaLR -109 265 159 333 0 0 0 chr5 18124312 18124349 -181505801 + (CA)n Simple_repeat Simple_repeat 2 38 0 977 190 7 108 chr5 18124349 18124545 -181505605 - MLT1A2 LTR MaLR -215 159 1 226 300 120 0 chr5 18124648 18124748 -181505402 + MIR SINE MIR 49 160 -102 1197 80 0 0 chr5 18124760 18124910 -181505240 + AluY SINE Alu 160 309 -2 292 287 21 21 chr5 18124921 18125015 -181505135 + MIR SINE MIR 153 246 -16 380 381 44 15 chr5 18127664 18127934 -181502216 - L1ME3A LINE L1 -299 5871 5594 659 305 5 15 chr5 18128317 18128520 -181501630 + MIR SINE MIR 11 211 -51 247 290 16 0 chr5 18128570 18128632 -181501518 - L2 LINE L2 -12 3301 3239 245 270 16 16 chr5 18128697 18128760 -181501390 + L2 LINE L2 3210 3272 0 180 0 0 0 chr5 18131325 18131345 -181498805 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 222 37 0 0 chr5 18131344 18131371 -181498779 + (CA)n Simple_repeat Simple_repeat 1 27 0 1859 138 76 3 chr5 18131459 18131750 -181498400 + AluSx SINE Alu 1 312 0 2158 123 0 3 chr5 18132681 18132983 -181497167 - AluSx SINE Alu -7 305 5 204 118 29 0 chr5 18133230 18133264 -181496886 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 1838 130 7 43 chr5 18133265 18133565 -181496585 - AluSx SINE Alu -23 289 1 204 172 31 31 chr5 18133739 18133803 -181496347 + (TATAA)n Simple_repeat Simple_repeat 1 64 0 2302 105 0 7 chr5 18134138 18134443 -181495707 + AluSg SINE Alu 1 303 -7 1836 121 37 7 chr5 18134557 18134829 -181495321 - AluSq SINE Alu -6 307 28 185 292 104 97 chr5 18135693 18135981 -181494169 - L2 LINE L2 -56 3216 2927 2269 99 79 15 chr5 18136008 18136350 -181493800 + THE1B LTR MaLR 1 364 0 254 333 0 0 chr5 18136506 18136584 -181493566 - L2 LINE L2 -990 2324 2247 514 256 78 57 chr5 18136647 18136877 -181493273 - L2 LINE L2 -1240 2074 1840 240 318 88 31 chr5 18137043 18137235 -181492915 - L2 LINE L2 -1723 1591 1389 701 309 82 10 chr5 18137237 18137528 -181492622 + L2 LINE L2 2326 2637 -677 1308 231 99 12 chr5 18137536 18137961 -181492189 + MLT1C LTR MaLR 6 467 0 775 266 171 37 chr5 18137964 18138552 -181491598 + L2 LINE L2 2650 3313 0 197 296 0 0 chr5 18138909 18138953 -181491197 + MIR3 SINE MIR 148 191 -17 252 213 0 0 chr5 18138977 18139038 -181491112 + CT-rich Low_complexity Low_complexity 1 61 0 2055 212 48 6 chr5 18140177 18140659 -181489491 - MLT1D LTR MaLR -1 504 3 303 305 0 0 chr5 18141282 18141364 -181488786 + L1MC4 LINE L1 6622 6703 -1339 1859 108 114 6 chr5 18141371 18141705 -181488445 + MSTA LTR MaLR 59 428 0 663 351 130 11 chr5 18141739 18142201 -181487949 + L2 LINE L2 2371 2887 -427 1264 231 14 67 chr5 18142987 18143317 -181486833 - L1ME2 LINE L1 -70 6094 5791 2477 58 0 0 chr5 18143317 18143612 -181486538 + AluY SINE Alu 1 295 -16 1264 231 14 67 chr5 18143612 18143713 -181486437 - L1ME2 LINE L1 -373 5791 5686 390 215 51 0 chr5 18143880 18144038 -181486112 - L1ME2 LINE L1 -1679 4467 4302 1007 243 33 52 chr5 18144145 18144196 -181485954 - L1ME2 LINE L1 -3015 3131 3081 2366 97 0 3 chr5 18144196 18144506 -181485644 - AluSq SINE Alu -4 309 1 1007 243 33 52 chr5 18144506 18144554 -181485596 - L1ME2 LINE L1 -3065 3081 3034 2096 114 7 16 chr5 18144554 18144861 -181485289 - AluJb SINE Alu -8 304 1 1007 243 33 52 chr5 18144861 18145184 -181484966 - L1ME2 LINE L1 -3112 3034 2716 843 246 189 15 chr5 18145186 18145610 -181484540 - MLT1H LTR MaLR -1 548 14 435 251 31 25 chr5 18145760 18145923 -181484227 - L1ME2 LINE L1 -3607 2539 2376 391 169 0 0 chr5 18146011 18146082 -181484068 - MER93b LTR ERV1 -111 262 192 865 198 6 0 chr5 18146116 18146273 -181483877 + MER93b LTR ERV1 1 158 -215 481 174 0 11 chr5 18146278 18146370 -181483780 + MER93b LTR ERV1 270 360 -13 2103 137 0 3 chr5 18146459 18146766 -181483384 - AluSx SINE Alu -6 306 1 440 220 0 0 chr5 18146836 18146927 -181483223 - MLT1D LTR MaLR -414 91 1 1259 109 139 0 chr5 18147234 18147436 -181482714 + MER30 DNA MER1_type 1 230 0 926 278 57 44 chr5 18148785 18149122 -181481028 + MER115 DNA AcHobo 1 332 -361 2509 108 17 8 chr5 18149122 18149483 -181480667 - THE1B LTR MaLR 0 364 1 926 278 57 44 chr5 18149483 18149776 -181480374 + MER115 DNA AcHobo 332 693 0 266 270 16 0 chr5 18149885 18149948 -181480202 + MIR SINE MIR 40 103 -159 1722 274 82 9 chr5 18150036 18150583 -181479567 - MLT1G1 LTR MaLR -2 593 7 318 265 99 26 chr5 18151231 18151382 -181478768 + MIR SINE MIR 101 262 0 2068 129 7 7 chr5 18154859 18155154 -181474996 + AluSx SINE Alu 3 297 -15 281 276 67 19 chr5 18155160 18155265 -181474885 - L2 LINE L2 0 3313 3204 684 309 39 4 chr5 18155566 18155796 -181474354 + MIR SINE MIR 20 257 -5 3237 110 20 22 chr5 18155854 18156353 -181473797 + L1MA4 LINE L1 5411 5908 -395 348 24 0 0 chr5 18156781 18156822 -181473328 + (CA)n Simple_repeat Simple_repeat 1 41 0 2252 151 29 0 chr5 18156822 18157199 -181472951 + L1MA4 LINE L1 5913 6300 0 294 189 18 41 chr5 18158009 18158178 -181471972 + (TCTA)n Simple_repeat Simple_repeat 4 168 0 458 319 83 6 chr5 18158338 18158507 -181471643 - MIR SINE MIR -15 247 66 24 53 0 0 chr5 18158557 18158595 -181471555 + AT_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr5 18158985 18159010 -181471140 + AT_rich Low_complexity Low_complexity 1 25 0 250 125 100 113 chr5 18159240 18159320 -181470830 + MIR SINE MIR 67 145 -63 21 36 0 0 chr5 18159397 18159425 -181470725 + AT_rich Low_complexity Low_complexity 1 28 0 275 273 71 30 chr5 18159738 18159837 -181470313 - L2 LINE L2 -3 3269 3167 219 362 38 0 chr5 18160260 18160365 -181469785 + MIR SINE MIR 102 210 -52 236 329 12 12 chr5 18161571 18161653 -181468497 + MIR3 SINE MIR 75 156 -52 474 352 6 6 chr5 18161663 18161842 -181468308 - MER117 DNA MER1_type -18 179 1 1951 146 42 74 chr5 18162922 18163325 -181466825 - MLT1B LTR MaLR 0 390 1 328 207 155 78 chr5 18163350 18163466 -181466684 - MIR SINE MIR -46 216 92 614 159 0 0 chr5 18163524 18163612 -181466538 + 5S rRNA rRNA 2 89 -32 2282 109 0 6 chr5 18163793 18164105 -181466045 - AluSq SINE Alu -3 310 1 949 230 82 62 chr5 18165967 18166196 -181463954 - MLT1A1 LTR MaLR -2 363 123 2380 107 41 39 chr5 18166196 18166559 -181463591 + THE1B LTR MaLR 1 364 0 949 230 82 62 chr5 18166559 18166685 -181463465 - MLT1A1 LTR MaLR -242 123 1 197 290 20 70 chr5 18166773 18166873 -181463277 - MIR SINE MIR -6 256 162 259 200 0 18 chr5 18168330 18168385 -181461765 + MIR SINE MIR 20 73 -189 2290 88 0 7 chr5 18168862 18169156 -181460994 - AluSc SINE Alu -17 292 1 731 224 141 21 chr5 18169239 18169431 -181460719 - MIR SINE MIR -43 219 5 2604 170 73 20 chr5 18170274 18170768 -181459382 + MLT2B1 LTR ERVL 1 520 0 207 266 0 47 chr5 18171490 18171554 -181458596 - L3 LINE CR1 -7 1570 1510 262 128 0 0 chr5 18171944 18171983 -181458167 - MSTB LTR MaLR 0 428 390 2333 104 3 0 chr5 18171983 18172314 -181457836 + AluSg SINE Alu 1 332 0 1928 168 29 70 chr5 18172314 18172730 -181457420 - MSTB LTR MaLR -27 399 1 564 310 27 11 chr5 18174444 18174631 -181455519 - MIR SINE MIR -50 212 23 382 244 49 0 chr5 18175365 18175488 -181454662 + MLT1D-int LTR MaLR 1243 1371 0 1612 249 70 33 chr5 18175488 18175975 -181454175 + MLT1D LTR MaLR 1 505 0 545 275 154 20 chr5 18175975 18176280 -181453870 + MLT1J1 LTR MaLR 101 446 0 614 104 10 0 chr5 18176589 18176685 -181453465 + (TCCA)n Simple_repeat Simple_repeat 1 97 0 241 231 0 0 chr5 18176685 18176737 -181453413 + (CCTA)n Simple_repeat Simple_repeat 1 52 0 229 204 0 0 chr5 18176778 18176827 -181453323 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 282 335 48 18 chr5 18177015 18177182 -181452968 - L2 LINE L2 -289 2983 2812 25 0 0 0 chr5 18177259 18177284 -181452866 + AT_rich Low_complexity Low_complexity 1 25 0 715 258 108 104 chr5 18179961 18180468 -181449682 - LTR67 LTR ERVL -26 531 23 279 0 0 0 chr5 18180469 18180500 -181449650 + (GA)n Simple_repeat Simple_repeat 2 32 0 645 305 26 26 chr5 18182118 18182387 -181447763 + MARNA DNA Mariner 299 567 -19 217 347 104 7 chr5 18182391 18182535 -181447615 - L3b LINE CR1 -118 1465 1308 393 296 85 40 chr5 18182549 18182725 -181447425 - MIR SINE MIR -71 191 8 14706 148 48 6 chr5 18183077 18185279 -181444871 + Tigger1 DNA MER2_type 1 2306 -112 2289 96 7 0 chr5 18185279 18185580 -181444570 - AluY SINE Alu -8 303 1 14706 148 48 6 chr5 18185580 18185698 -181444452 + Tigger1 DNA MER2_type 2306 2418 0 2426 203 52 74 chr5 18186278 18186910 -181443240 - MLT1E2 LTR MaLR -8 618 1 271 228 13 148 chr5 18187125 18187274 -181442876 + MLT1H LTR MaLR 421 549 0 333 356 42 6 chr5 18187398 18187579 -181442571 + MIR SINE MIR 17 204 -58 264 350 50 0 chr5 18187604 18187724 -181442426 - L2 LINE L2 -6 3307 3182 384 178 0 0 chr5 18187799 18187872 -181442278 + CT-rich Low_complexity Low_complexity 2 74 0 259 216 0 0 chr5 18189880 18189931 -181440219 + L2 LINE L2 3262 3312 -1 1764 181 3 0 chr5 18189993 18190291 -181439859 + AluSx SINE Alu 1 299 -13 451 355 42 21 chr5 18190773 18190962 -181439188 - MER91A DNA MER1_type -3 193 1 433 293 80 42 chr5 18191636 18191875 -181438275 + MIR SINE MIR 15 262 0 771 292 138 6 chr5 18193362 18193416 -181436734 - LTR16A LTR ERVL 0 450 404 216 23 0 68 chr5 18193416 18193460 -181436690 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 771 292 138 6 chr5 18193460 18193717 -181436433 - LTR16A LTR ERVL -46 404 98 5147 167 41 4 chr5 18194190 18195111 -181435039 + L1MA4 LINE L1 5345 6299 -1 1412 244 6 9 chr5 18195099 18195444 -181434706 + L1MA9 LINE L1 5931 6274 -38 * 2165 128 0 0 chr5 18195455 18195752 -181434398 - AluSc SINE Alu -12 297 1 601 274 42 12 chr5 18195768 18195936 -181434214 + MLT1A2 LTR MaLR 156 328 -46 494 299 0 17 chr5 18196643 18196820 -181433330 - MIR SINE MIR 0 262 89 209 346 45 45 chr5 18197171 18197327 -181432823 + L3 LINE CR1 137 292 -1285 315 326 131 18 chr5 18197597 18197879 -181432271 + L2 LINE L2 2995 3308 -5 182 263 229 8 chr5 18197848 18197966 -181432184 + L3 LINE CR1 957 1100 -477 * 190 321 15 73 chr5 18198207 18198344 -181431806 + L3 LINE CR1 1301 1429 -148 211 308 103 13 chr5 18199975 18200053 -181430097 + L2 LINE L2 3188 3272 0 21 0 0 0 chr5 18200878 18200899 -181429251 + AT_rich Low_complexity Low_complexity 1 21 0 1071 186 64 0 chr5 18200965 18201169 -181428981 - MER20 DNA MER1_type 0 219 3 186 233 0 0 chr5 18202252 18202295 -181427855 - L2 LINE L2 0 3313 3271 279 260 73 31 chr5 18202601 18202697 -181427453 - MER5B DNA MER1_type -78 100 1 601 195 9 9 chr5 18202705 18202818 -181427332 - MER5B DNA MER1_type 0 178 66 526 261 28 28 chr5 18202847 18202989 -181427161 + MER5B DNA MER1_type 1 142 -36 185 277 134 45 chr5 18203398 18203510 -181426640 + MIR3 SINE MIR 1 122 -86 326 261 104 0 chr5 18204253 18204368 -181425782 - MER63 DNA MER1_type -309 753 1 9422 217 48 27 chr5 18204446 18208241 -181421909 + L1MA9 LINE L1 971 4687 -1861 1775 116 4 0 chr5 18208241 18208483 -181421667 + AluSx SINE Alu 37 279 -33 9422 217 48 27 chr5 18208483 18209549 -181420601 + L1MA9 LINE L1 4687 6059 -489 261 0 0 0 chr5 18209549 18209578 -181420572 + (CA)n Simple_repeat Simple_repeat 2 30 0 9422 217 48 27 chr5 18209578 18210074 -181420076 + L1MA9 LINE L1 6059 6543 -5 2242 78 51 3 chr5 18210986 18211282 -181418868 + AluY SINE Alu 1 310 -1 226 216 0 0 chr5 18212268 18212319 -181417831 - L1ME4a LINE L1 -69 6052 6002 258 239 15 112 chr5 18212341 18212475 -181417675 - MLT1H LTR MaLR -1 548 428 201 204 0 20 chr5 18212779 18212828 -181417322 + (TA)n Simple_repeat Simple_repeat 1 48 0 314 222 33 22 chr5 18212829 18212919 -181417231 + L1MC4 LINE L1 6613 6703 -1339 300 289 52 0 chr5 18212930 18213027 -181417123 + MIR SINE MIR 151 252 -10 1614 176 35 26 chr5 18213033 18213373 -181416777 + MLT1A2 LTR MaLR 1 343 -31 444 264 111 57 chr5 18213408 18213652 -181416498 - L1ME4a LINE L1 -248 5873 5600 575 250 9 0 chr5 18213937 18214053 -181416097 - FLAM_A SINE Alu -16 117 1 243 281 75 38 chr5 18214525 18214685 -181415465 - HAL1 LINE L1 -715 1792 1627 210 250 21 0 chr5 18214932 18214980 -181415170 + CT-rich Low_complexity Low_complexity 4 52 0 289 304 29 74 chr5 18215086 18215329 -181414821 - MLT1J LTR MaLR -52 459 228 23 0 0 0 chr5 18216225 18216248 -181413902 + AT_rich Low_complexity Low_complexity 1 23 0 189 213 0 0 chr5 18216889 18216936 -181413214 + GA-rich Low_complexity Low_complexity 2 48 0 2238 239 33 26 chr5 18217199 18217846 -181412304 - L1MC4a LINE L1 -146 7653 6992 180 0 0 0 chr5 18217846 18217866 -181412284 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 2238 239 33 26 chr5 18217866 18218201 -181411949 - L1MC4a LINE L1 -807 6992 6661 1004 217 8 16 chr5 18218215 18218468 -181411682 - L1M4 LINE L1 -1366 5016 4766 2782 190 9 57 chr5 18219486 18219981 -181410169 - L1MB3 LINE L1 -2 6181 5728 2240 112 0 0 chr5 18219981 18220284 -181409866 + AluSx SINE Alu 6 308 -4 2782 190 9 57 chr5 18220284 18220489 -181409661 - L1MB3 LINE L1 -455 5728 5515 * 6025 159 30 30 chr5 18220487 18222104 -181408046 - L1M4 LINE L1 -3427 2955 1332 842 243 28 0 chr5 18222095 18222309 -181407841 + L1ME LINE L1 5496 5715 -451 * 233 213 0 43 chr5 18222452 18222499 -181407651 - L2 LINE L2 -82 3190 3146 228 260 55 27 chr5 18222672 18222745 -181407405 + MER5C DNA MER1_type 20 94 -230 23 33 0 0 chr5 18222811 18222841 -181407309 + AT_rich Low_complexity Low_complexity 1 30 0 452 156 67 22 chr5 18222850 18222985 -181407165 + L1MC4 LINE L1 7902 8042 0 21 0 0 0 chr5 18223032 18223053 -181407097 + AT_rich Low_complexity Low_complexity 1 21 0 1586 248 42 48 chr5 18223108 18223608 -181406542 - MLT1D LTR MaLR -5 500 4 232 404 57 10 chr5 18223646 18223943 -181406207 - L2 LINE L2 -452 2862 2552 314 198 49 35 chr5 18224098 18224226 -181405924 - MLT2F LTR ERVL -9 654 336 484 126 76 0 chr5 18224342 18224449 -181405701 - MLT1E3 LTR MaLR -446 208 46 376 272 0 76 chr5 18224448 18224606 -181405544 - MLT2F LTR ERVL -517 146 1 * 356 186 14 14 chr5 18226453 18226593 -181403557 + GA-rich Low_complexity Low_complexity 1 140 0 417 318 19 0 chr5 18227475 18227629 -181402521 + MLT2E LTR ERVL 3 159 -469 357 189 24 94 chr5 18227731 18227807 -181402343 + MLT2E LTR ERVL 504 570 -58 1990 127 3 0 chr5 18227807 18228120 -181402030 + AluSx SINE Alu 1 314 0 357 189 24 94 chr5 18228120 18228169 -181401981 + MLT2E LTR ERVL 570 621 -7 213 284 45 0 chr5 18228341 18228408 -181401742 - L2 LINE L2 -1 3312 3243 430 269 8 0 chr5 18228422 18228541 -181401609 + MER94 DNA DNA 2 121 -13 455 233 127 57 chr5 18229064 18229292 -181400858 + MIR SINE MIR 18 261 -1 1954 102 44 4 chr5 18230912 18231219 -181398931 - AluSx SINE Alu 0 318 1 549 270 138 50 chr5 18231718 18232005 -181398145 + LTR33 LTR ERVL 100 419 -102 1300 181 33 109 chr5 18232005 18232398 -181397752 - MLT1A1 LTR MaLR 0 365 3 549 270 138 50 chr5 18232398 18232428 -181397722 + LTR33 LTR ERVL 419 445 -76 7325 156 15 12 chr5 18232428 18233456 -181396694 - Tigger1 DNA MER2_type 0 2418 1395 2248 111 3 3 chr5 18233456 18233754 -181396396 + AluSq SINE Alu 1 298 -15 180 0 0 0 chr5 18233757 18233777 -181396373 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7325 156 15 12 chr5 18233777 18235099 -181395051 - Tigger1 DNA MER2_type -1024 1394 1 1306 168 54 19 chr5 18235123 18235451 -181394699 + MLT2C1 LTR ERVL 4 424 -37 311 287 17 17 chr5 18235451 18235566 -181394584 + (TATATG)n Simple_repeat Simple_repeat 3 117 0 2047 233 25 18 chr5 18235567 18236077 -181394073 - MLT2B3 LTR ERVL -40 514 1 790 210 74 0 chr5 18237720 18237896 -181392254 + MER5A DNA MER1_type 1 189 0 234 239 156 18 chr5 18238042 18238151 -181391999 - MIR SINE MIR -99 163 40 1240 200 42 93 chr5 18238660 18239045 -181391105 + MLT1A1 LTR MaLR 1 365 0 192 77 0 0 chr5 18239712 18239738 -181390412 + (CAGAA)n Simple_repeat Simple_repeat 1 26 0 423 230 52 63 chr5 18240771 18240945 -181389205 - MER34B LTR ERV1 0 565 394 354 194 0 0 chr5 18241216 18241283 -181388867 - MER34 LTR ERV1 -473 69 3 306 268 12 20 chr5 18241294 18241410 -181388740 - MIR SINE MIR -78 130 19 2107 173 10 18 chr5 18242793 18243186 -181386964 - MLT1B LTR MaLR 0 390 1 285 75 0 0 chr5 18243351 18243391 -181386759 + (ATG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr5 18243653 18243674 -181386476 + AT_rich Low_complexity Low_complexity 1 21 0 2161 108 0 26 chr5 18243907 18244212 -181385938 - AluSq SINE Alu -16 297 1 268 243 14 27 chr5 18244504 18244578 -181385572 + CT-rich Low_complexity Low_complexity 6 78 0 574 224 17 103 chr5 18244674 18244906 -181385244 + MLT1F1 LTR MaLR 7 218 -324 * 855 219 85 0 chr5 18244893 18245117 -181385033 + MLT1F1 LTR MaLR 323 565 -2 681 311 55 21 chr5 18245169 18245458 -181384692 + L2 LINE L2 3014 3312 -1 1666 245 66 32 chr5 18245977 18246500 -181383650 + L2 LINE L2 2451 3000 -313 2821 74 3 11 chr5 18246500 18246877 -181383273 + THE1C LTR MaLR 2 375 0 1666 245 66 32 chr5 18246877 18247040 -181383110 + L2 LINE L2 3000 3156 -157 213 244 0 0 chr5 18247066 18247111 -181383039 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 259 111 0 0 chr5 18247218 18247254 -181382896 - MER5A DNA MER1_type -150 39 4 914 176 11 11 chr5 18247265 18247452 -181382698 - MER3 DNA MER1_type -5 204 18 1021 166 0 6 chr5 18247467 18247648 -181382502 - MER3 DNA MER1_type -24 185 6 384 233 42 33 chr5 18247662 18247782 -181382368 + L2 LINE L2 3192 3312 -1 264 341 159 16 chr5 18247786 18247912 -181382238 + L2 LINE L2 3126 3269 -3 299 65 22 0 chr5 18249035 18249081 -181381069 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 2148 131 3 0 chr5 18251171 18251476 -181378674 + AluSx SINE Alu 1 306 -6 2132 137 0 13 chr5 18251563 18251878 -181378272 + AluSx SINE Alu 1 311 -1 1466 208 0 14 chr5 18253596 18253885 -181376265 + AluJb SINE Alu 2 286 -26 504 0 0 0 chr5 18253885 18253941 -181376209 + (TA)n Simple_repeat Simple_repeat 2 57 0 280 309 24 0 chr5 18254255 18254339 -181375811 + L2 LINE L2 3228 3313 0 192 296 182 0 chr5 18254412 18254500 -181375650 + L2 LINE L2 3201 3304 -9 2290 97 3 3 chr5 18254502 18254801 -181375349 - AluSc SINE Alu -9 300 2 488 79 53 0 chr5 18256346 18256422 -181373728 - MADE1 DNA Mariner 0 80 1 746 253 18 27 chr5 18256535 18256756 -181373394 + MER46C DNA MER2_type 19 237 -101 272 191 95 0 chr5 18258994 18259057 -181371093 - MIR SINE MIR -79 129 61 191 326 59 30 chr5 18261182 18261317 -181368833 + L2 LINE L2 2603 2741 -573 2777 152 57 50 chr5 18261542 18262162 -181367988 + L1MB2 LINE L1 5544 6167 -4 250 224 0 0 chr5 18263620 18263669 -181366481 + L1ME4a LINE L1 5967 6015 -106 296 175 16 0 chr5 18263740 18263803 -181366347 + (TA)n Simple_repeat Simple_repeat 2 65 0 341 24 0 0 chr5 18314448 18314489 -181315661 - L1PB1 LINE L1 -254 5897 5857 1830 73 30 0 chr5 18314489 18314712 -181315438 + L1PB1 LINE L1 5911 6151 0 1533 173 23 29 chr5 18314718 18314839 -181315311 + L1M2 LINE L1 5177 5297 -994 1059 139 0 0 chr5 18314839 18315019 -181315131 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 1533 173 23 29 chr5 18315019 18315302 -181314848 + L1M2 LINE L1 5297 5573 -718 2323 151 64 25 chr5 18315848 18316252 -181313898 + MSTA LTR MaLR 5 424 -4 22 0 0 0 chr5 18316837 18316859 -181313291 + AT_rich Low_complexity Low_complexity 1 22 0 329 271 17 25 chr5 18316991 18317109 -181313041 + L2 LINE L2 3192 3308 -5 283 188 16 16 chr5 18317836 18317900 -181312250 - MER58B DNA MER1_type 0 341 278 937 231 25 59 chr5 18317910 18318230 -181311920 + MER92B LTR ERV1 326 634 -2 * 1708 210 103 2 chr5 18318230 18318629 -181311521 + Charlie1 DNA MER1_type 576 1015 -1746 369 186 76 25 chr5 18318628 18318746 -181311404 + Charlie1 DNA MER1_type 2638 2761 0 * 242 232 0 0 chr5 18318960 18319021 -181311129 + (TTA)n Simple_repeat Simple_repeat 1 61 0 395 267 0 27 chr5 18319155 18319301 -181310849 + T-rich Low_complexity Low_complexity 4 145 0 1952 191 127 54 chr5 18320298 18320943 -181309207 - LTR1B LTR ERV1 0 826 135 412 289 14 16 chr5 18321057 18321214 -181308936 + L1ME1 LINE L1 5452 5606 -560 416 284 0 18 chr5 18321214 18321543 -181308607 + (TATATG)n Simple_repeat Simple_repeat 1 322 0 225 267 23 23 chr5 18321568 18321654 -181308496 + L1MC4 LINE L1 6615 6700 -1342 229 157 47 93 chr5 18321657 18321829 -181308321 + (TATATG)n Simple_repeat Simple_repeat 6 169 0 468 245 0 33 chr5 18321848 18322032 -181308118 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 305 268 0 62 chr5 18322056 18322153 -181307997 + L1MC4 LINE L1 6615 6705 -1337 300 337 0 0 chr5 18322096 18322185 -181307965 - L1MC4 LINE L1 -1340 6702 6614 * 23 0 0 0 chr5 18322191 18322214 -181307936 + AT_rich Low_complexity Low_complexity 1 23 0 1710 227 79 48 chr5 18322227 18322452 -181307698 + L1ME1 LINE L1 5603 5819 -347 476 32 16 0 chr5 18322452 18322514 -181307636 + (CA)n Simple_repeat Simple_repeat 2 64 0 1710 227 79 48 chr5 18322514 18322830 -181307320 + L1ME1 LINE L1 5819 6161 -5 467 280 0 0 chr5 18323548 18323648 -181306502 - L2 LINE L2 -15 3298 3199 23 0 0 0 chr5 18323665 18323688 -181306462 + AT_rich Low_complexity Low_complexity 1 23 0 2505 65 0 3 chr5 18323790 18324099 -181306051 - AluY SINE Alu -3 308 1 2276 81 3 0 chr5 18326580 18326886 -181303264 + AluSp SINE Alu 1 307 0 1412 238 59 0 chr5 18328119 18328439 -181301711 + MER58B DNA MER1_type 1 339 -2 2475 169 24 10 chr5 18328763 18329178 -181300972 + MSTB LTR MaLR 1 421 -5 564 321 205 3 chr5 18329184 18329570 -181300580 + L2 LINE L2 2199 2662 -652 1322 154 9 9 chr5 18330734 18330967 -181299183 + LTR1 LTR ERV1 1 233 -552 393 22 0 0 chr5 18331316 18331362 -181298788 + (CA)n Simple_repeat Simple_repeat 2 47 0 1863 163 3 3 chr5 18332245 18332534 -181297616 - AluSx SINE Alu -23 289 1 1766 170 35 84 chr5 18332753 18333006 -181297144 - MSTB1 LTR MaLR 0 432 209 3468 116 8 25 chr5 18333006 18333524 -181296626 - MER75 DNA T2_type -2 512 4 1766 170 35 84 chr5 18333524 18333724 -181296426 - MSTB1 LTR MaLR -223 209 1 2218 124 0 0 chr5 18334901 18335199 -181294951 + AluSx SINE Alu 2 299 -13 3130 37 3 0 chr5 18335256 18335610 -181294540 + L1PA5 LINE L1 5792 6146 -8 182 62 31 0 chr5 18335624 18335656 -181294494 + (TAAAAA)n Simple_repeat Simple_repeat 4 36 0 193 247 65 39 chr5 18335699 18335776 -181294374 - L2 LINE L2 -1 3312 3234 2315 97 0 25 chr5 18337356 18337677 -181292473 + AluSq SINE Alu 1 313 0 557 245 0 0 chr5 18337740 18337879 -181292271 - L1MB7 LINE L1 -52 6132 5994 1571 231 118 60 chr5 18338458 18339143 -181291007 + MER50 LTR ERV1 10 734 0 1772 110 91 19 chr5 18340157 18340465 -181289685 + AluSq SINE Alu 1 327 0 1222 184 14 5 chr5 18342425 18342642 -181287508 + MER20 DNA MER1_type 1 219 0 1196 201 94 6 chr5 18342796 18343311 -181286839 + MLT1E1 LTR MaLR 1 649 -5 2254 124 0 0 chr5 18343320 18343626 -181286524 + AluSx SINE Alu 5 310 -2 2194 138 58 6 chr5 18343765 18344112 -181286038 + MLT1A1 LTR MaLR 1 365 0 284 277 119 34 chr5 18344522 18344699 -181285451 + MIR3 SINE MIR 17 208 0 21 0 0 0 chr5 18344786 18344807 -181285343 + AT_rich Low_complexity Low_complexity 1 21 0 593 209 13 20 chr5 18345597 18345750 -181284400 - MER106B DNA MER1_type 0 1059 908 1922 156 13 7 chr5 18345879 18346186 -181283964 - AluJo SINE Alu -3 309 1 2816 222 52 21 chr5 18346190 18346821 -181283329 + MER82 DNA MER2_type 1 651 -2 550 252 50 71 chr5 18346889 18347127 -181283023 + MIR SINE MIR 23 255 -7 2252 108 44 36 chr5 18347659 18348019 -181282131 + THE1B LTR MaLR 2 364 0 478 171 12 0 chr5 18348477 18348559 -181281591 + MLT1F1 LTR MaLR 1 83 -484 277 197 155 0 chr5 18348563 18348634 -181281516 + MER5A DNA MER1_type 105 186 -3 223 336 43 29 chr5 18348809 18348949 -181281201 + MIR SINE MIR 11 152 -110 2126 130 19 82 chr5 18348997 18349421 -181280729 - MLT2C1 LTR ERVL 0 397 1 34 55 0 0 chr5 18349741 18349796 -181280354 + AT_rich Low_complexity Low_complexity 1 55 0 241 264 46 35 chr5 18351441 18351528 -181278622 - MER97b DNA MER1_type? -965 88 1 204 179 0 0 chr5 18351579 18351618 -181278532 + (TG)n Simple_repeat Simple_repeat 2 40 0 306 173 49 12 chr5 18351859 18351940 -181278210 - L1MA9 LINE L1 -22 6290 6207 2483 186 19 11 chr5 18352123 18352601 -181277549 - L1MB4 LINE L1 0 6180 5699 238 75 50 0 chr5 18353233 18353273 -181276877 + Alu SINE Alu 2 43 -90 303 216 0 0 chr5 18353373 18353449 -181276701 + AluS SINE Alu 228 303 0 588 169 0 0 chr5 18353617 18353706 -181276444 - AluSg/x SINE Alu -17 295 207 1538 169 4 0 chr5 18353706 18353942 -181276208 - AluSx SINE Alu -75 237 1 562 269 57 57 chr5 18354257 18354469 -181275681 + MIR SINE MIR 21 232 -30 1732 159 10 24 chr5 18354665 18354960 -181275190 + AluJo SINE Alu 9 299 -13 254 346 0 0 chr5 18355223 18355301 -181274849 + L2 LINE L2 3133 3210 -62 1620 224 35 13 chr5 18355563 18355938 -181274212 - MLT1C LTR MaLR -34 433 51 4764 143 22 7 chr5 18357285 18357996 -181272154 + MER72 LTR ERV1 1 722 0 195 330 74 74 chr5 18358032 18358208 -181271942 + MIR3 SINE MIR 10 185 -23 233 194 111 120 chr5 18359226 18359334 -181270816 + MLT1L LTR MaLR 427 533 -82 216 0 0 0 chr5 18360330 18360354 -181269796 + (T)n Simple_repeat Simple_repeat 1 24 0 3458 162 38 38 chr5 18360549 18361177 -181268973 - MER21B LTR ERV1 -24 839 212 635 167 0 10 chr5 18361345 18361447 -181268703 - FLAM_C SINE Alu -19 124 24 202 318 36 45 chr5 18361738 18361848 -181268302 + MIR3 SINE MIR 74 182 -26 543 284 175 0 chr5 18362058 18362269 -181267881 + MIR SINE MIR 5 252 -10 420 160 13 0 chr5 18363842 18363917 -181266233 - MER116 DNA Mariner -4 76 1 2093 127 0 0 chr5 18364316 18364608 -181265542 - AluSx SINE Alu -20 292 1 346 287 115 32 chr5 18365356 18365513 -181264637 - MIR SINE MIR -33 229 60 209 220 242 22 chr5 18365613 18365704 -181264446 + MIR SINE MIR 21 131 -131 2305 92 0 3 chr5 18365843 18366137 -181264013 + AluSc SINE Alu 4 296 -13 2509 68 0 0 chr5 18366406 18366702 -181263448 - AluY SINE Alu -15 296 1 247 378 140 7 chr5 18367248 18367555 -181262595 - L2 LINE L2 -375 2939 2592 2184 148 135 5 chr5 18368243 18368622 -181261528 - MSTA LTR MaLR 0 428 1 2424 83 0 3 chr5 18369163 18369465 -181260685 + AluSq SINE Alu 1 301 -12 393 295 0 0 chr5 18370151 18370256 -181259894 + MIR SINE MIR 73 177 -85 391 337 105 30 chr5 18370267 18370599 -181259551 - L2 LINE L2 -29 3284 2928 357 330 86 31 chr5 18370632 18370923 -181259227 - L2 LINE L2 -481 2833 2527 36 40 0 0 chr5 18372743 18372793 -181257357 + AT_rich Low_complexity Low_complexity 1 50 0 1066 126 82 6 chr5 18372898 18373081 -181257069 + THE1C LTR MaLR 179 375 0 8393 141 113 8 chr5 18373081 18374512 -181255638 + THE1C-int LTR MaLR 1 1580 0 2204 144 65 8 chr5 18374512 18374867 -181255283 + THE1C LTR MaLR 1 375 0 2032 146 0 3 chr5 18375589 18375883 -181254267 + AluSx SINE Alu 1 293 -19 1723 200 35 9 chr5 18377486 18377826 -181252324 - MLT1A2 LTR MaLR -20 354 6 556 246 74 29 chr5 18377830 18378005 -181252145 + MLT1G LTR MaLR 108 290 -300 387 0 0 0 chr5 18380223 18380266 -181249884 + (CA)n Simple_repeat Simple_repeat 2 44 0 287 320 109 39 chr5 18380898 18381026 -181249124 - L2 LINE L2 -33 3239 3103 2373 102 0 3 chr5 18381477 18381791 -181248359 + AluSp SINE Alu 1 313 0 1010 151 19 73 chr5 18382704 18382909 -181247241 - MER20 DNA MER1_type -25 194 1 207 0 0 0 chr5 18385450 18385473 -181244677 + (T)n Simple_repeat Simple_repeat 1 23 0 238 321 63 31 chr5 18385596 18385755 -181244395 - MIR SINE MIR -70 192 29 250 274 126 91 chr5 18385816 18386046 -181244104 + MER102a DNA MER1_type 88 325 -5 2257 103 7 0 chr5 18386738 18387038 -181243112 - AluSp SINE Alu 0 313 12 19085 27 6 0 chr5 18387348 18390260 -181239890 + L1PA4 LINE L1 3240 6148 -7 331 271 47 9 chr5 18390565 18390672 -181239478 - MIR3 SINE MIR -6 202 92 196 189 170 19 chr5 18391418 18391471 -181238679 + L2 LINE L2 3253 3313 0 1183 256 105 20 chr5 18391916 18392315 -181237835 + MLT2B1 LTR ERVL 1 433 -87 34 42 0 0 chr5 18392371 18392419 -181237731 + AT_rich Low_complexity Low_complexity 1 48 0 294 94 48 0 chr5 18392454 18392510 -181237640 + MLT2C2 LTR ERVL 417 464 0 26 30 0 0 chr5 18392997 18393030 -181237120 + AT_rich Low_complexity Low_complexity 1 33 0 203 321 74 12 chr5 18394210 18394291 -181235859 - L2 LINE L2 -1 3312 3227 428 274 105 13 chr5 18394326 18394479 -181235671 + L1ME3A LINE L1 5621 5787 -383 590 287 29 55 chr5 18394479 18394751 -181235399 + L2 LINE L2 3047 3311 -2 345 257 20 20 chr5 18394751 18394852 -181235298 + GA-rich Low_complexity Low_complexity 1 101 0 328 293 0 10 chr5 18394868 18394967 -181235183 + L1ME3A LINE L1 5808 5905 -265 2389 214 44 40 chr5 18394969 18395712 -181234438 - L1MA9 LINE L1 -743 5403 4658 * 3680 162 46 70 chr5 18395710 18396618 -181233532 + L1MA9 LINE L1 5410 6300 0 186 222 67 22 chr5 18397993 18398038 -181232112 + MIR SINE MIR 94 140 -68 326 303 0 20 chr5 18398470 18398569 -181231581 - MIR SINE MIR -11 251 155 1089 195 63 17 chr5 18399329 18399640 -181230510 - L1MB4 LINE L1 0 6174 5866 23 33 0 0 chr5 18400121 18400151 -181229999 + AT_rich Low_complexity Low_complexity 1 30 0 2236 70 7 7 chr5 18400269 18400554 -181229596 + AluY SINE Alu 2 286 -25 1950 181 123 23 chr5 18400948 18401379 -181228771 + MLT2B1 LTR ERVL 1 474 -46 847 57 51 23 chr5 18401392 18401567 -181228583 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 368 71 18 0 chr5 18401665 18401721 -181228429 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 213 65 0 0 chr5 18402288 18402319 -181227831 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 279 316 173 0 chr5 18402776 18402909 -181227241 - MER5A DNA MER1_type 0 189 34 284 284 45 58 chr5 18402947 18403102 -181227048 + MIR SINE MIR 91 243 -19 236 214 0 0 chr5 18403854 18403896 -181226254 + MIR SINE MIR 106 147 -115 370 354 62 85 chr5 18403898 18404406 -181225744 - L2 LINE L2 0 3272 2792 2369 96 0 0 chr5 18404406 18404707 -181225443 - AluSc SINE Alu -8 301 1 370 354 62 85 chr5 18404707 18404890 -181225260 - L2 LINE L2 -480 2792 2606 230 291 133 86 chr5 18404908 18405337 -181224813 - L2 LINE L2 -939 2375 1927 1517 179 65 17 chr5 18407733 18408085 -181222065 - MER58D DNA MER1_type -11 375 7 226 255 0 0 chr5 18408236 18408287 -181221863 - MIR SINE MIR -3 259 209 1410 148 63 77 chr5 18408332 18408683 -181221467 + MER4A LTR ERV1 1 346 -318 594 92 242 25 chr5 18408778 18408898 -181221252 + MER4C LTR ERV1 300 445 -20 435 258 13 5 chr5 18408928 18409069 -181221081 - MIR SINE MIR -62 146 33 470 252 34 20 chr5 18409122 18409269 -181220881 + MARNA DNA Mariner 12 160 -426 2416 205 42 7 chr5 18409630 18410083 -181220067 + MER70A LTR ERVL 4 472 0 261 309 31 80 chr5 18410422 18410584 -181219566 + L2 LINE L2 2231 2384 -930 1103 194 63 63 chr5 18410688 18410759 -181219391 - MER33 DNA MER1_type -2266 319 249 2124 131 0 16 chr5 18410759 18410927 -181219223 - AluSx SINE Alu -11 301 139 2294 98 0 0 chr5 18410927 18411224 -181218926 - AluSx SINE Alu -15 297 1 2124 131 0 16 chr5 18411224 18411361 -181218789 - AluSx SINE Alu -173 139 1 1103 194 63 63 chr5 18411361 18411608 -181218542 - MER33 DNA MER1_type -2335 250 1 240 155 138 0 chr5 18412041 18412099 -181218051 + L2 LINE L2 3188 3253 -60 231 278 0 0 chr5 18412222 18412276 -181217874 + L2 LINE L2 3215 3268 -4 1870 121 0 4 chr5 18413210 18413482 -181216668 - MER66B LTR ERV1 0 486 216 479 222 0 26 chr5 18413484 18413601 -181216549 - MER66B LTR ERV1 -372 114 1 2327 153 31 0 chr5 18414042 18414395 -181215755 + THE1B LTR MaLR 1 364 0 519 231 75 81 chr5 18415433 18415664 -181214486 + L1MC4a LINE L1 5822 6052 -1756 2284 116 0 0 chr5 18415664 18415965 -181214185 + AluSx SINE Alu 1 301 -11 519 231 75 81 chr5 18415965 18416028 -181214122 + L1MC4a LINE L1 6052 6114 -1694 229 65 0 0 chr5 18416030 18416076 -181214074 - LTR66 LTR ERVL -171 439 394 233 232 0 37 chr5 18416078 18416160 -181213990 - L1MC4 LINE L1 -1347 6695 6617 * 259 160 187 0 chr5 18416088 18416163 -181213987 + L1MC4 LINE L1 6617 6705 -1337 428 296 8 0 chr5 18416293 18416418 -181213732 + L1MC4 LINE L1 7793 7918 -124 186 133 0 0 chr5 18416432 18416462 -181213688 + (CA)n Simple_repeat Simple_repeat 1 30 0 1693 202 8 60 chr5 18416551 18416932 -181213218 + MLT1A1 LTR MaLR 5 365 0 5889 135 26 14 chr5 18420200 18420300 -181209850 + L1MC1 LINE L1 5351 5448 -885 1888 143 77 44 chr5 18420300 18420663 -181209487 - THE1C LTR MaLR 0 375 1 10368 120 26 42 chr5 18420664 18422268 -181207882 - MSTA-int LTR MaLR -1 1579 3 1923 143 172 21 chr5 18422270 18422642 -181207508 - MSTA LTR MaLR 0 428 1 5889 135 26 14 chr5 18422642 18423506 -181206644 + L1MC1 LINE L1 5448 6331 -2 545 285 98 32 chr5 18424320 18424636 -181205514 + L2 LINE L2 2174 2510 -804 347 323 36 12 chr5 18425410 18425577 -181204573 - MIR SINE MIR -10 252 82 279 122 0 0 chr5 18426291 18426340 -181203810 + (CTATA)n Simple_repeat Simple_repeat 4 52 0 1727 211 62 57 chr5 18426537 18426974 -181203176 + MER77 LTR ERV1 167 605 0 306 250 0 13 chr5 18427170 18427246 -181202904 + L3 LINE CR1 1096 1170 -407 271 258 61 74 chr5 18427281 18427444 -181202706 - MLT1J LTR MaLR -49 462 302 2426 57 0 10 chr5 18427823 18428123 -181202027 + AluY SINE Alu 1 297 -14 3449 139 43 0 chr5 18428146 18428699 -181201451 + L1MA8 LINE L1 5708 6284 -7 23 0 0 0 chr5 18428702 18428725 -181201425 + AT_rich Low_complexity Low_complexity 1 23 0 2195 148 33 33 chr5 18428761 18429125 -181201025 + THE1B LTR MaLR 1 364 0 279 284 45 23 chr5 18429675 18429763 -181200387 + L3 LINE CR1 1481 1570 -7 373 288 34 0 chr5 18429820 18429938 -181200212 + L1ME4a LINE L1 5973 6094 -27 209 196 0 39 chr5 18431835 18431886 -181198264 + (TATATG)n Simple_repeat Simple_repeat 3 51 0 220 289 53 13 chr5 18431974 18432050 -181198100 + MIR SINE MIR 63 141 -67 641 266 48 19 chr5 18432280 18432487 -181197663 - MIR SINE MIR 0 262 50 392 292 112 29 chr5 18433571 18433899 -181196251 + MLT1J LTR MaLR 9 328 -122 2436 74 0 3 chr5 18433937 18434234 -181195916 - AluY SINE Alu -15 296 1 630 211 105 37 chr5 18434371 18434561 -181195589 + MER3 DNA MER1_type 1 203 -6 237 164 91 0 chr5 18436156 18436211 -181193939 + HsTC2 DNA Tc2 1233 1292 -606 809 252 57 9 chr5 18436254 18436484 -181193666 - MIR SINE MIR -21 241 1 4427 78 7 4 chr5 18437145 18437697 -181192453 + MER41A LTR ERV1 1 554 0 180 97 0 0 chr5 18438034 18438065 -181192085 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2157 103 3 0 chr5 18438159 18438449 -181191701 - AluSx SINE Alu -21 291 1 274 310 78 47 chr5 18438510 18438639 -181191511 + L2 LINE L2 3126 3258 -14 238 227 18 100 chr5 18438842 18438952 -181191198 + L2 LINE L2 2430 2530 -784 1900 128 83 0 chr5 18439244 18439532 -181190618 + AluSx SINE Alu 1 312 0 1932 59 0 0 chr5 18440259 18440496 -181189654 + AluY SINE Alu 75 311 0 2433 104 28 43 chr5 18440523 18440952 -181189198 - THE1C LTR MaLR 0 375 1 181 387 44 29 chr5 18441157 18441361 -181188789 - L2 LINE L2 -213 3059 2853 377 382 7 13 chr5 18442113 18442265 -181187885 + MIR3 SINE MIR 10 160 -48 881 256 100 14 chr5 18442422 18442765 -181187385 - LTR16A LTR ERVL 0 457 60 218 250 243 40 chr5 18442899 18443047 -181187103 + MIR SINE MIR 25 202 -6 21 0 0 0 chr5 18443609 18443630 -181186520 + AT_rich Low_complexity Low_complexity 1 21 0 266 235 39 29 chr5 18445733 18445857 -181184293 + MIR SINE MIR 96 216 -46 419 256 103 54 chr5 18446492 18446734 -181183416 + MIR SINE MIR 9 262 0 200 263 0 40 chr5 18446914 18446990 -181183160 + CT-rich Low_complexity Low_complexity 2 74 0 584 266 168 12 chr5 18448905 18449149 -181181001 - L3 LINE CR1 -40 1537 1256 1851 158 6 29 chr5 18449175 18449462 -181180688 + MER47A DNA MER2_type 27 306 -2017 2086 116 3 0 chr5 18449462 18449746 -181180404 - AluSq SINE Alu -24 289 5 1851 158 6 29 chr5 18449746 18449806 -181180344 + MER47A DNA MER2_type 306 366 0 1679 203 14 28 chr5 18450634 18450994 -181179156 + MLT1A1 LTR MaLR 11 365 0 3369 195 82 1 chr5 18451007 18451678 -181178472 + MER44D DNA MER2_type 1 597 -8 307 294 24 141 chr5 18451739 18452116 -181178034 + L2 LINE L2 2981 3313 0 694 288 18 9 chr5 18452119 18452345 -181177805 + MIR SINE MIR 29 256 -6 305 224 0 0 chr5 18453440 18453498 -181176652 - MER5A DNA MER1_type -118 71 14 2769 118 30 23 chr5 18453758 18454055 -181176095 - MER57B LTR ERV1 0 434 131 2100 120 0 0 chr5 18454055 18454373 -181175777 - AluSx SINE Alu 0 318 1 2769 118 30 23 chr5 18454373 18454505 -181175645 - MER57B LTR ERV1 -303 131 1 288 77 0 0 chr5 18455618 18455657 -181174493 + (CA)n Simple_repeat Simple_repeat 2 40 0 358 282 90 115 chr5 18456788 18457430 -181172720 + L1M2 LINE L1 530 1155 -5694 182 175 0 35 chr5 18458233 18458290 -181171860 + (CATA)n Simple_repeat Simple_repeat 2 56 0 2391 116 79 20 chr5 18458820 18459224 -181170926 - MSTC LTR MaLR 0 428 1 213 255 61 133 chr5 18459399 18459497 -181170653 - MIR3 SINE MIR -51 157 67 352 293 47 0 chr5 18460034 18460140 -181170010 + L2 LINE L2 3162 3272 0 3029 202 116 33 chr5 18460461 18461366 -181168784 + L1MDa LINE L1 617 1596 -4944 1414 141 101 4 chr5 18461366 18461642 -181168508 + L1MD1 LINE L1 5930 6232 -10 356 299 77 1 chr5 18462965 18463107 -181167043 - MIR SINE MIR -49 213 63 310 160 28 57 chr5 18463432 18463538 -181166612 + (TAGA)n Simple_repeat Simple_repeat 2 104 0 2448 125 77 10 chr5 18464056 18464457 -181165693 - MSTA LTR MaLR 0 428 1 384 283 37 64 chr5 18464462 18464649 -181165501 - MLT1J2 LTR MaLR -4 446 265 407 230 20 0 chr5 18464706 18464806 -181165344 - MLT1J LTR MaLR -325 186 85 871 320 46 38 chr5 18464918 18465312 -181164838 - L2 LINE L2 -37 3276 2880 1276 321 158 45 chr5 18465755 18466163 -181163987 - L2 LINE L2 -426 2888 2527 1477 173 70 11 chr5 18466163 18466447 -181163703 + AluJo SINE Alu 7 307 -5 1276 321 158 45 chr5 18466447 18467345 -181162805 - L2 LINE L2 -787 2527 1435 364 329 71 52 chr5 18467903 18468009 -181162141 + LTR16A LTR ERVL 130 233 -217 884 257 23 0 chr5 18468009 18468223 -181161927 - MER20 DNA MER1_type 0 219 1 364 329 71 52 chr5 18468223 18468326 -181161824 + LTR16A LTR ERVL 233 343 -107 460 300 94 23 chr5 18468392 18468699 -181161451 + HERV16 LTR ERVL 13 341 -4655 461 349 37 0 chr5 18468783 18469001 -181161149 + LTR16A LTR ERVL 172 397 -53 382 328 102 4 chr5 18469058 18469293 -181160857 + L2 LINE L2 1705 1962 -1352 1313 256 152 72 chr5 18469323 18469533 -181160617 + L2 LINE L2 639 831 -2483 2493 158 9 21 chr5 18469533 18469964 -181160186 + MSTC LTR MaLR 3 428 0 1313 256 152 72 chr5 18469964 18470677 -181159473 + L2 LINE L2 831 1635 -1679 976 291 77 31 chr5 18470718 18471134 -181159016 + LTR16C LTR ERVL 57 491 0 2238 298 65 48 chr5 18471200 18471674 -181158476 + L2 LINE L2 1765 2230 -1084 1062 119 24 0 chr5 18471674 18471842 -181158308 - L1MA3 LINE L1 0 6305 6134 2238 298 65 48 chr5 18471842 18472381 -181157769 + L2 LINE L2 2230 2795 -519 1841 177 0 13 chr5 18473031 18473341 -181156809 + AluJb SINE Alu 1 306 -6 2163 188 65 62 chr5 18474214 18474842 -181155308 + LTR8A LTR ERV1 45 674 -53 299 291 43 10 chr5 18477280 18477399 -181152751 - MIR3 SINE MIR -6 202 78 2289 113 0 0 chr5 18477427 18477728 -181152422 + AluSx SINE Alu 1 301 -11 2098 133 48 25 chr5 18478436 18478790 -181151360 - THE1B LTR MaLR 0 364 3 3231 111 62 0 chr5 18478792 18479289 -181150861 - THE1B-int LTR MaLR 0 1580 1053 246 62 0 0 chr5 18479287 18479319 -181150831 - THE1B-int LTR MaLR -1548 32 1 * 2306 112 48 31 chr5 18479319 18479677 -181150473 - THE1B LTR MaLR 0 364 1 850 51 8 17 chr5 18480791 18480908 -181149242 - L1PA8 LINE L1 0 6172 6057 180 0 0 0 chr5 18480908 18480928 -181149222 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1695 101 0 0 chr5 18480982 18481219 -181148931 - L1PA8 LINE L1 -11 6161 5925 2166 130 0 0 chr5 18483917 18484225 -181145925 - AluSx SINE Alu -2 310 3 192 300 56 56 chr5 18484397 18484487 -181145663 - L3b LINE CR1 -94 1489 1400 2208 124 0 0 chr5 18484822 18485121 -181145029 - AluSx SINE Alu -13 299 1 189 253 147 27 chr5 18485415 18485490 -181144660 - MIR SINE MIR -69 139 56 1926 144 27 3 chr5 18486267 18486559 -181143591 - AluSx SINE Alu -12 300 2 2479 68 10 0 chr5 18486642 18486949 -181143201 + AluY SINE Alu 1 310 -1 3846 146 140 7 chr5 18487228 18487956 -181142194 + LTR1B LTR ERV1 2 826 0 209 301 55 0 chr5 18488016 18488089 -181142061 + MIR SINE MIR 71 147 -115 643 272 72 38 chr5 18488475 18488710 -181141440 - MIR SINE MIR -16 246 4 2154 176 5 17 chr5 18489999 18490356 -181139794 - L1PB4 LINE L1 -7 6149 5796 225 0 0 0 chr5 18490356 18490381 -181139769 + (TG)n Simple_repeat Simple_repeat 2 26 0 2154 176 5 17 chr5 18490381 18490433 -181139717 - L1PB4 LINE L1 -360 5796 5745 3148 191 13 7 chr5 18490434 18491146 -181139004 + L1 LINE L1 4328 5043 -1103 633 199 0 0 chr5 18491224 18491355 -181138795 + (CA)n Simple_repeat Simple_repeat 2 132 0 2335 185 41 11 chr5 18491356 18491815 -181138335 - MLT2B2 LTR ERVL -40 475 3 729 134 17 0 chr5 18492284 18492403 -181137747 + MLT1E LTR MaLR 40 160 -433 2415 226 68 15 chr5 18492544 18493059 -181137091 + L1M4 LINE L1 4682 5243 -903 1784 172 33 7 chr5 18493059 18493361 -181136789 + AluJo SINE Alu 1 310 -2 2415 226 68 15 chr5 18493361 18493523 -181136627 + L1M4 LINE L1 5243 5395 -751 10688 204 38 10 chr5 18493532 18498858 -181131292 + L1M3f LINE L1 4 5525 -803 2016 172 36 33 chr5 18498858 18499408 -181130742 - MLT2A2 LTR ERVL 0 554 1 657 123 0 0 chr5 18499408 18499514 -181130636 + L1PA16 LINE L1 5339 5444 -856 * 10347 162 20 7 chr5 18499509 18500321 -181129829 + L1MA1 LINE L1 3122 3922 -2380 2833 92 0 12 chr5 18500321 18500724 -181129426 + L1PA10 LINE L1 5771 6168 0 10347 162 20 7 chr5 18500724 18502968 -181127182 + L1MA1 LINE L1 3922 6220 -82 2657 151 22 0 chr5 18502968 18503423 -181126727 + L1PA16 LINE L1 5685 6157 -9 26 64 0 0 chr5 18503423 18503470 -181126680 + AT_rich Low_complexity Low_complexity 1 47 0 2102 134 0 6 chr5 18503907 18504221 -181125929 - AluSx SINE Alu 0 312 1 513 286 26 16 chr5 18504657 18504846 -181125304 + LTR16C LTR ERVL 301 491 0 1539 192 36 9 chr5 18507354 18507687 -181122463 - L1PA16 LINE L1 -22 6144 5803 495 355 52 16 chr5 18507916 18508282 -181121868 - LTR16C LTR ERVL 0 491 113 271 109 0 78 chr5 18508750 18508814 -181121336 - Alu SINE Alu -1 301 243 393 268 32 24 chr5 18510255 18510378 -181119772 - MIR3 SINE MIR -18 190 67 2001 214 36 42 chr5 18511969 18512333 -181117817 - MLT1D LTR MaLR -13 492 130 1813 146 93 74 chr5 18512333 18512402 -181117748 - MSTB LTR MaLR 0 426 360 2048 145 0 0 chr5 18512402 18512698 -181117452 - AluSq SINE Alu -17 296 1 1813 146 93 74 chr5 18512698 18513046 -181117104 - MSTB LTR MaLR -66 360 1 2001 214 36 42 chr5 18513046 18513176 -181116974 - MLT1D LTR MaLR -375 130 1 1478 254 60 44 chr5 18513264 18513623 -181116527 - MER74B LTR ERVL -58 564 193 2307 95 0 0 chr5 18513623 18513918 -181116232 - AluSc SINE Alu -14 295 1 1478 254 60 44 chr5 18513918 18514057 -181116093 - MER74B LTR ERVL -429 193 58 192 40 0 0 chr5 18515076 18515101 -181115049 + (CA)n Simple_repeat Simple_repeat 2 26 0 1715 154 49 10 chr5 18515464 18515770 -181114380 + MER46B DNA MER2_type 44 236 0 45 75 0 0 chr5 18517185 18517279 -181112871 + AT_rich Low_complexity Low_complexity 1 94 0 606 207 49 0 chr5 18517654 18517818 -181112332 - L1M4 LINE L1 -3706 2440 2269 4141 268 75 36 chr5 18517828 18518739 -181111411 - L1ME1 LINE L1 -5 6230 5356 3713 142 18 5 chr5 18518739 18519364 -181110786 - L1PB4 LINE L1 -14 6142 5510 4141 268 75 36 chr5 18519364 18521531 -181108619 - L1ME1 LINE L1 -879 5356 3275 2252 150 11 0 chr5 18521531 18521891 -181108259 - MER47A DNA MER2_type -2 364 1 4141 268 75 36 chr5 18521891 18522948 -181107202 - L1ME1 LINE L1 -2960 3275 2260 2217 100 13 10 chr5 18522948 18523247 -181106903 - AluSc SINE Alu -9 300 1 4141 268 75 36 chr5 18523247 18525063 -181105087 - L1ME1 LINE L1 -3975 2260 82 278 249 27 141 chr5 18525328 18525513 -181104637 + MIR SINE MIR 20 183 -79 32 0 0 0 chr5 18525637 18525669 -181104481 + AT_rich Low_complexity Low_complexity 1 32 0 35 24 0 0 chr5 18525698 18525740 -181104410 + AT_rich Low_complexity Low_complexity 1 42 0 3780 242 88 18 chr5 18526312 18527589 -181102561 + L1MD1 LINE L1 19 1502 -5038 1683 194 66 17 chr5 18527589 18527953 -181102197 + MLT2D LTR ERVL 1 480 -40 1750 164 31 65 chr5 18527955 18528063 -181102087 + L1MD1 LINE L1 1528 1638 -4902 997 69 0 0 chr5 18528063 18528194 -181101956 + L1PB1 LINE L1 6020 6150 -1 1750 164 31 65 chr5 18528194 18528531 -181101619 + L1MD1 LINE L1 1638 1958 -4582 * 3495 218 57 32 chr5 18528530 18530328 -181099822 + L1MD1 LINE L1 4654 6539 -97 1310 259 19 11 chr5 18530328 18530699 -181099451 + MLT1A2 LTR MaLR 1 374 0 3495 218 57 32 chr5 18530699 18530797 -181099353 + L1MD1 LINE L1 6539 6633 -3 417 39 0 0 chr5 18531347 18531398 -181098752 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 339 328 90 25 chr5 18532308 18532509 -181097641 - MIR SINE MIR -29 233 20 252 313 10 21 chr5 18532839 18532957 -181097193 + MIR SINE MIR 35 127 -81 396 264 124 35 chr5 18532965 18533223 -181096927 - MLT1J LTR MaLR 0 511 231 1595 152 114 20 chr5 18533398 18533740 -181096410 - THE1C LTR MaLR 0 375 2 288 303 53 53 chr5 18534714 18534866 -181095284 - MIR SINE MIR -32 230 79 21 0 0 0 chr5 18534896 18534917 -181095233 + AT_rich Low_complexity Low_complexity 1 21 0 365 149 149 37 chr5 18535756 18535863 -181094287 + L1MB7 LINE L1 6047 6165 -19 219 320 165 0 chr5 18536640 18536743 -181093407 + L2 LINE L2 3150 3269 -3 316 321 142 5 chr5 18536765 18536977 -181093173 + L2 LINE L2 3002 3242 -71 1726 96 122 11 chr5 18537961 18538231 -181091919 + AluSg1 SINE Alu 1 300 -9 1163 119 0 0 chr5 18538231 18538419 -181091731 + AluSg/x SINE Alu 134 321 0 356 390 52 0 chr5 18539094 18539439 -181090711 + ERVL LTR ERVL 1656 2064 -3700 25 0 0 0 chr5 18540298 18540323 -181089827 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 18541985 18542016 -181088134 + AT_rich Low_complexity Low_complexity 1 31 0 2227 147 0 16 chr5 18542022 18542396 -181087754 - L1PB1 LINE L1 -8 6143 5776 305 192 0 60 chr5 18542439 18542606 -181087544 + (TA)n Simple_repeat Simple_repeat 1 157 0 343 209 22 52 chr5 18542628 18542762 -181087388 + (TATATG)n Simple_repeat Simple_repeat 4 133 0 7694 177 8 7 chr5 18542779 18544855 -181085295 - L1PB1 LINE L1 -371 5780 3706 1684 228 5 16 chr5 18545114 18545492 -181084658 + MLT1A2 LTR MaLR 1 374 0 794 255 205 11 chr5 18545496 18545886 -181084264 + MLT1C LTR MaLR 1 466 -1 184 280 20 20 chr5 18546133 18546183 -181083967 + L2 LINE L2 3223 3272 0 244 255 0 0 chr5 18546377 18546424 -181083726 + polypurine Low_complexity Low_complexity 4 50 0 630 60 0 0 chr5 18546628 18546711 -181083439 + (TCCCC)n Simple_repeat Simple_repeat 2 84 0 2017 140 3 0 chr5 18546711 18547004 -181083146 - AluSg SINE Alu -14 296 3 184 70 47 47 chr5 18547241 18547284 -181082866 + T-rich Low_complexity Low_complexity 2 44 0 717 185 143 37 chr5 18547314 18547503 -181082647 + MER3 DNA MER1_type 1 209 0 820 215 33 56 chr5 18547682 18547896 -181082254 + MER58A DNA MER1_type 1 209 -15 2134 105 22 29 chr5 18548289 18548604 -181081546 - AluSq SINE Alu 0 313 1 319 273 107 8 chr5 18549111 18549232 -181080918 + MLT1H1 LTR MaLR 422 554 -1 2321 99 0 3 chr5 18549493 18549797 -181080353 + AluSx SINE Alu 1 303 -9 3027 127 82 24 chr5 18549876 18550374 -181079776 + MER1A DNA MER1_type 1 527 0 353 361 5 25 chr5 18550439 18550641 -181079509 - L2 LINE L2 -3 3310 3113 282 341 157 18 chr5 18550660 18550877 -181079273 - L2 LINE L2 -885 2429 2183 972 239 131 33 chr5 18551177 18551283 -181078867 + L1M4 LINE L1 2728 2822 -3324 2261 111 0 9 chr5 18551283 18551598 -181078552 + AluSq SINE Alu 1 312 -1 972 239 131 33 chr5 18551598 18552180 -181077970 + L1M4 LINE L1 2822 3488 -2658 1179 133 5 0 chr5 18552200 18552396 -181077754 - L1MA2 LINE L1 0 6304 6108 778 69 0 0 chr5 18552453 18552554 -181077596 - L1P1 LINE L1 -414 5741 5641 * 3766 58 12 10 chr5 18552474 18552971 -181077179 + L1PA2 LINE L1 5657 6154 -1 1521 281 164 23 chr5 18552970 18554130 -181076020 + L1M4 LINE L1 3528 4850 -1296 * 679 200 0 13 chr5 18554225 18554380 -181075770 + L1MB8 LINE L1 6025 6177 -1 1359 273 99 13 chr5 18554395 18554861 -181075289 + L1MEc LINE L1 233 738 -5658 2946 207 39 12 chr5 18554881 18555629 -181074521 - L1M4 LINE L1 -981 5165 4398 26018 31 0 0 chr5 18555631 18559552 -181070598 - L1PA3 LINE L1 -3 6152 2233 12688 55 2 5 chr5 18559552 18561501 -181068649 - L1PA3 LINE L1 -4191 1955 9 906 195 0 0 chr5 18561510 18561710 -181068440 - L1M4 LINE L1 -1717 4429 4230 * 987 236 71 3 chr5 18561702 18561998 -181068152 + L1M4 LINE L1 5088 5403 -743 939 18 9 0 chr5 18662432 18662541 -180967609 + L1HS LINE L1 6044 6153 -2 23 54 0 0 chr5 18662541 18662578 -180967572 + AT_rich Low_complexity Low_complexity 1 37 0 43885 29 21 2 chr5 18663260 18669297 -180960853 + L1HS LINE L1 2 6155 0 22 0 0 0 chr5 18669355 18669377 -180960773 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 18671070 18671094 -180959056 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr5 18672032 18672053 -180958097 + (TTTAA)n Simple_repeat Simple_repeat 5 25 0 732 104 0 9 chr5 18672058 18672164 -180957986 - L1MA5A LINE L1 -5 6292 6188 2145 177 11 16 chr5 18674312 18674679 -180955471 + MLT1A1 LTR MaLR 1 365 0 2367 69 3 3 chr5 18676445 18676734 -180953416 + AluSp SINE Alu 1 289 -24 207 261 36 9 chr5 18676734 18676845 -180953305 + (TA)n Simple_repeat Simple_repeat 1 114 0 318 305 23 38 chr5 18678364 18678495 -180951655 + L2 LINE L2 3185 3313 0 1889 157 4 0 chr5 18678679 18678960 -180951190 - AluSx SINE Alu -30 282 1 1886 108 0 4 chr5 18679533 18679783 -180950367 + AluSx SINE Alu 48 296 -16 2492 58 3 10 chr5 18679869 18680178 -180949972 + AluY SINE Alu 1 307 -4 317 276 79 8 chr5 18680493 18680620 -180949530 - L1ME4a LINE L1 -11 6110 5975 467 121 0 0 chr5 18680629 18680695 -180949455 + MADE1 DNA Mariner 15 80 0 203 0 0 36 chr5 18681515 18681543 -180948607 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1677 111 103 0 chr5 18681545 18681806 -180948344 - AluSp SINE Alu -25 288 1 425 250 72 72 chr5 18682569 18682676 -180947474 + MIR SINE MIR 9 118 -144 2542 50 3 0 chr5 18682676 18682976 -180947174 - AluY SINE Alu -10 301 1 425 250 72 72 chr5 18682976 18683048 -180947102 + MIR SINE MIR 117 188 -74 228 213 0 0 chr5 18683145 18683192 -180946958 + L2 LINE L2 3265 3311 -2 513 292 167 33 chr5 18683264 18683654 -180946496 + L2 LINE L2 2547 2998 -315 1057 230 164 39 chr5 18683693 18684101 -180946049 + LTR33 LTR ERVL 58 516 -5 736 249 106 26 chr5 18684102 18684375 -180945775 + L2 LINE L2 3019 3313 0 2116 144 0 45 chr5 18685063 18685271 -180944879 - MER1B DNA MER1_type -2373 337 150 2156 92 44 0 chr5 18685271 18685566 -180944584 + AluSp SINE Alu 1 308 -5 2116 144 0 45 chr5 18685566 18685710 -180944440 - MER1B DNA MER1_type -2560 150 1 712 238 23 23 chr5 18686072 18686244 -180943906 - MER5B DNA MER1_type -6 172 1 2120 106 0 4 chr5 18687295 18687615 -180942535 + AluSx SINE Alu 13 331 0 263 188 16 31 chr5 18689518 18689582 -180940568 - MER4-int LTR ERV1 -5433 1165 1103 1648 160 16 39 chr5 18689791 18690097 -180940053 + AluJb SINE Alu 1 299 -13 1498 289 66 38 chr5 18690291 18690868 -180939282 + MLT1E LTR MaLR 1 593 0 1007 232 79 92 chr5 18691196 18691328 -180938822 + MLT1B LTR MaLR 1 133 -257 1820 79 0 0 chr5 18691328 18691555 -180938595 + AluY SINE Alu 83 309 -2 1007 232 79 92 chr5 18691555 18691801 -180938349 + MLT1B LTR MaLR 133 374 -16 3034 129 9 5 chr5 18693572 18693998 -180936152 + MSTA LTR MaLR 1 428 0 4676 82 28 3 chr5 18694144 18694763 -180935387 + L1PB1 LINE L1 5515 6148 -3 24 0 0 0 chr5 18694767 18694791 -180935359 + AT_rich Low_complexity Low_complexity 1 24 0 322 240 44 115 chr5 18694816 18694999 -180935151 + MIR SINE MIR 90 259 -3 240 0 49 24 chr5 18695072 18695113 -180935037 + (TA)n Simple_repeat Simple_repeat 1 42 0 631 194 304 28 chr5 18695121 18695374 -180934776 - MER5C DNA MER1_type -1 323 1 327 254 55 65 chr5 18695705 18695906 -180934244 + LTR67 LTR ERVL 359 557 0 344 246 71 48 chr5 18696765 18696891 -180933259 - MER5B DNA MER1_type -49 129 1 180 333 0 0 chr5 18698711 18698762 -180931388 + MIR SINE MIR 66 116 -92 29958 114 18 20 chr5 18699400 18705157 -180924993 - L1PA7 LINE L1 0 6469 691 1764 187 0 0 chr5 18705741 18706025 -180924125 - AluJb SINE Alu -28 284 1 258 229 47 153 chr5 18706183 18706353 -180923797 - L2 LINE L2 -48 3265 3114 720 230 42 21 chr5 18706509 18706700 -180923450 + MLT1E LTR MaLR 1 195 -398 622 217 7 35 chr5 18706806 18706949 -180923201 + MLT1B LTR MaLR 423 561 -6 448 239 20 70 chr5 18706966 18707167 -180922983 - L2 LINE L2 -172 3141 2951 205 266 138 27 chr5 18707202 18707390 -180922760 - MIR SINE MIR -30 232 24 1975 251 65 45 chr5 18707403 18707728 -180922422 - MLT1E2 LTR MaLR -4 622 278 2433 86 0 0 chr5 18707728 18708029 -180922121 - AluSc SINE Alu -8 301 1 1975 251 65 45 chr5 18708029 18708301 -180921849 - MLT1E2 LTR MaLR -348 278 13 232 355 79 7 chr5 18708468 18708620 -180921530 - L2 LINE L2 -218 3054 2892 2931 88 5 8 chr5 18708939 18709316 -180920834 + L1PA8A LINE L1 5753 6128 -3 233 346 0 12 chr5 18710125 18710206 -180919944 + GA-rich Low_complexity Low_complexity 6 85 0 422 333 22 30 chr5 18710778 18711009 -180919141 + MLT1K LTR MaLR 350 578 -10 387 191 63 35 chr5 18711381 18711500 -180918650 - MSTB1 LTR MaLR 0 432 246 465 165 23 11 chr5 18711548 18711653 -180918497 - MSTB1 LTR MaLR 0 432 346 286 27 27 0 chr5 18711717 18711754 -180918396 - MSTB1 LTR MaLR 0 432 395 1591 165 32 51 chr5 18711920 18712273 -180917877 - MSTB1 LTR MaLR -72 324 4 341 320 135 17 chr5 18713239 18713408 -180916742 + MIR SINE MIR 61 253 -9 2356 138 30 25 chr5 18713408 18713770 -180916380 - THE1B LTR MaLR 0 364 1 208 227 0 0 chr5 18713870 18713914 -180916236 + L2 LINE L2 3265 3308 -5 516 345 21 21 chr5 18714866 18715060 -180915090 + MIR3 SINE MIR 6 199 -9 403 305 47 8 chr5 18715886 18716014 -180914136 + MIR SINE MIR 12 144 -118 2337 138 8 3 chr5 18716054 18716416 -180913734 + THE1B LTR MaLR 1 364 0 521 207 43 0 chr5 18716428 18716544 -180913606 - MER20 DNA MER1_type -98 121 1 187 89 89 0 chr5 18717598 18717654 -180912496 + (TA)n Simple_repeat Simple_repeat 1 61 0 857 216 64 23 chr5 18718336 18718554 -180911596 + MIR SINE MIR 3 229 -33 254 258 90 0 chr5 18718637 18718726 -180911424 + MIR3 SINE MIR 84 180 -28 388 311 124 48 chr5 18718765 18719108 -180911042 + L1ME4a LINE L1 5539 5933 -188 198 0 0 0 chr5 18719108 18719130 -180911020 + (GGAA)n Simple_repeat Simple_repeat 3 24 0 388 311 124 48 chr5 18719130 18719285 -180910865 + L1ME4a LINE L1 5933 6075 -46 1259 117 4 60 chr5 18719286 18719535 -180910615 - L1PA13 LINE L1 -1 6162 5928 1949 99 10 17 chr5 18719536 18719838 -180910312 + THE1A LTR MaLR 56 355 0 561 306 52 22 chr5 18719908 18720140 -180910010 + MIR SINE MIR 18 256 -6 660 282 86 21 chr5 18722662 18722896 -180907254 + MIR SINE MIR 2 250 -12 324 0 0 0 chr5 18724000 18724036 -180906114 + (TG)n Simple_repeat Simple_repeat 2 37 0 25 0 0 0 chr5 18724204 18724229 -180905921 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 18725706 18725731 -180904419 + AT_rich Low_complexity Low_complexity 1 25 0 520 275 105 16 chr5 18725792 18725996 -180904154 + MIR SINE MIR 3 219 -43 2257 135 34 8 chr5 18726132 18726487 -180903663 - THE1B LTR MaLR 0 364 1 2226 107 0 3 chr5 18727167 18727466 -180902684 + AluSg SINE Alu 1 298 -12 1887 224 75 47 chr5 18727737 18728331 -180901819 - MLT1E1 LTR MaLR -12 642 28 2773 85 11 11 chr5 18728331 18728706 -180901444 + THE1C LTR MaLR 1 375 0 1887 224 75 47 chr5 18728706 18728735 -180901415 - MLT1E1 LTR MaLR -626 28 1 405 332 129 11 chr5 18728775 18729061 -180901089 - L1MC/D LINE L1 -2457 5585 5266 927 233 12 27 chr5 18729183 18729441 -180900709 + MER93b LTR ERV1 108 361 -12 2487 60 0 3 chr5 18729858 18730158 -180899992 - AluY SINE Alu -12 299 1 245 203 8 55 chr5 18731901 18732029 -180898121 + (TA)n Simple_repeat Simple_repeat 1 122 0 337 298 142 19 chr5 18732385 18732590 -180897560 - L2 LINE L2 -1 3312 3083 1905 152 45 22 chr5 18732919 18733275 -180896875 - THE1B LTR MaLR 0 364 1 6011 121 16 3 chr5 18733275 18734201 -180895949 - THE1B-int LTR MaLR 0 1580 643 408 268 93 103 chr5 18734257 18734980 -180895170 + L1M4 LINE L1 3782 4492 -1654 2257 95 20 0 chr5 18734980 18735274 -180894876 - AluSc SINE Alu -9 300 1 408 268 93 103 chr5 18735274 18735608 -180894542 + L1M4 LINE L1 4492 4828 -1318 206 256 13 0 chr5 18736032 18736110 -180894040 + GA-rich Low_complexity Low_complexity 1 79 0 318 299 57 32 chr5 18736343 18736814 -180893336 + L1M4 LINE L1 4878 5360 -786 1783 166 47 36 chr5 18737313 18737674 -180892476 + MLT1A1 LTR MaLR 1 365 0 1089 298 55 70 chr5 18739139 18739653 -180890497 + L2 LINE L2 2806 3311 -2 246 259 37 49 chr5 18739691 18739772 -180890378 + L2 LINE L2 3192 3271 -42 218 281 151 60 chr5 18740136 18740321 -180889829 + MIR SINE MIR 13 214 -48 256 219 37 24 chr5 18741075 18741157 -180888993 - MIR SINE MIR -128 134 52 695 236 37 11 chr5 18741330 18741727 -180888423 - LTR37B LTR ERV1 0 468 6 1677 159 49 62 chr5 18742355 18742669 -180887481 + MLT1A1 LTR MaLR 1 311 -54 2368 128 28 17 chr5 18742669 18743029 -180887121 - THE1B LTR MaLR 0 364 1 1677 159 49 62 chr5 18743029 18743084 -180887066 + MLT1A1 LTR MaLR 311 365 0 345 196 93 162 chr5 18745250 18745321 -180884829 - MER69 DNA AcHobo -1036 190 116 450 0 0 0 chr5 18745321 18745371 -180884779 + (TG)n Simple_repeat Simple_repeat 2 51 0 2191 107 0 0 chr5 18745372 18745653 -180884497 - AluSx SINE Alu -31 281 1 345 196 93 162 chr5 18745653 18745783 -180884367 - MER69 DNA AcHobo -1109 117 1 180 0 0 0 chr5 18746585 18746605 -180883545 + (CCA)n Simple_repeat Simple_repeat 3 22 0 665 243 22 5 chr5 18747407 18747592 -180882558 - MER53 DNA DNA -1 188 1 341 239 123 71 chr5 18747609 18747764 -180882386 - MIR SINE MIR 0 262 100 1187 236 121 11 chr5 18748074 18748430 -180881720 + MSTD LTR MaLR 2 396 0 181 400 19 0 chr5 18748742 18748847 -180881303 - L2 LINE L2 -221 3051 2945 2068 142 0 0 chr5 18749137 18749440 -180880710 + AluSx SINE Alu 1 303 -9 180 359 127 21 chr5 18749893 18750035 -180880115 + MIR3 SINE MIR 15 171 -37 235 331 129 8 chr5 18750900 18751024 -180879126 + MIR3 SINE MIR 62 200 -8 2441 62 0 56 chr5 18751537 18751861 -180878289 - AluSx SINE Alu -6 306 1 261 326 170 36 chr5 18751931 18752348 -180877802 + L3 LINE CR1 1064 1536 -41 227 343 0 0 chr5 18752797 18752867 -180877283 + MIR SINE MIR 42 111 -151 * 776 208 33 44 chr5 18752863 18753046 -180877104 + MER5A DNA MER1_type 8 188 -1 373 233 167 17 chr5 18753046 18753165 -180876985 + MIR SINE MIR 102 238 -24 2028 126 0 38 chr5 18753470 18753787 -180876363 - AluSc SINE Alu -4 305 1 365 288 23 23 chr5 18754305 18754437 -180875713 - MIR SINE MIR -122 140 9 33 43 0 0 chr5 18754571 18754618 -180875532 + AT_rich Low_complexity Low_complexity 1 47 0 205 299 75 59 chr5 18754727 18754914 -180875236 - L2 LINE L2 -8 3264 3075 194 163 70 23 chr5 18754911 18754954 -180875196 + MER5B DNA MER1_type 102 146 -32 * 585 206 7 35 chr5 18756642 18756783 -180873367 + MER58B DNA MER1_type 204 340 -1 369 0 0 0 chr5 18757113 18757154 -180872996 + (CA)n Simple_repeat Simple_repeat 1 41 0 248 188 16 0 chr5 18757701 18757765 -180872385 + (CA)n Simple_repeat Simple_repeat 2 66 0 2359 138 8 6 chr5 18757991 18758354 -180871796 - THE1B LTR MaLR 0 364 1 266 308 125 10 chr5 18758713 18758817 -180871333 - MIR SINE MIR -63 145 30 2925 123 32 20 chr5 18759204 18759570 -180870580 - L1PB3 LINE L1 0 6154 5779 267 103 0 0 chr5 18759570 18759609 -180870541 + (TA)n Simple_repeat Simple_repeat 2 40 0 2925 123 32 20 chr5 18759609 18759739 -180870411 - L1PB3 LINE L1 -375 5779 5652 255 240 260 0 chr5 18761092 18761188 -180868962 - MER103 DNA DNA -44 122 2 6918 62 3 3 chr5 18761269 18762654 -180867496 - L1PA7 LINE L1 0 6154 4768 4802 75 3 0 chr5 18762654 18763332 -180866818 + L1PA7 LINE L1 4080 4759 -1387 6311 79 5 5 chr5 18763341 18764230 -180865920 - L1PA8 LINE L1 -6 6166 5278 2314 149 21 21 chr5 18764240 18764628 -180865522 + MLT1B LTR MaLR 1 388 -2 258 327 55 35 chr5 18764947 18765146 -180865004 - L2 LINE L2 -2 3311 3109 2219 119 0 0 chr5 18765281 18765575 -180864575 - AluSq SINE Alu -16 297 4 246 277 34 67 chr5 18766296 18766415 -180863735 - MIR SINE MIR 0 262 148 185 265 0 20 chr5 18766472 18766521 -180863629 - MIR SINE MIR -201 61 14 225 290 16 0 chr5 18767065 18767127 -180863023 - L2 LINE L2 -24 3248 3186 2044 128 33 3 chr5 18768615 18768919 -180861231 + AluSq SINE Alu 1 313 0 274 299 55 8 chr5 18769188 18769315 -180860835 - MER94 DNA DNA -1 133 1 243 327 37 9 chr5 18769735 18769842 -180860308 + MIR3 SINE MIR 98 207 -1 2033 164 5 44 chr5 18770590 18770938 -180859212 + MLT1B LTR MaLR 1 334 -56 2290 135 12 24 chr5 18770938 18771279 -180858871 - MER1B DNA MER1_type 0 337 1 2033 164 5 44 chr5 18771279 18771314 -180858836 + MLT1B LTR MaLR 334 369 -21 209 33 33 0 chr5 18771356 18771386 -180858764 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1615 191 0 3 chr5 18771388 18771671 -180858479 - AluJo SINE Alu -30 282 1 269 341 0 11 chr5 18772245 18772336 -180857814 + GA-rich Low_complexity Low_complexity 2 91 0 645 307 115 48 chr5 18772718 18772904 -180857246 - L2 LINE L2 -10 3303 3131 2201 118 3 0 chr5 18772904 18773200 -180856950 + AluSx SINE Alu 1 297 -15 645 307 115 48 chr5 18773200 18773826 -180856324 - L2 LINE L2 -182 3131 2440 420 97 0 0 chr5 18774160 18774222 -180855928 + (CA)n Simple_repeat Simple_repeat 2 63 0 1840 214 36 13 chr5 18774585 18774973 -180855177 + MLT2C1 LTR ERVL 1 397 0 289 307 143 7 chr5 18775205 18775345 -180854805 + MIR SINE MIR 104 262 0 2291 98 3 3 chr5 18776195 18776500 -180853650 + AluSp SINE Alu 1 305 -8 206 303 90 11 chr5 18776703 18776792 -180853358 + L2 LINE L2 3138 3233 -39 247 359 53 23 chr5 18778262 18778393 -180851757 + MER91A DNA MER1_type 26 160 -36 213 280 0 0 chr5 18778399 18778449 -180851701 + MER91A DNA MER1_type 137 186 -10 255 318 23 8 chr5 18778508 18778640 -180851510 - MER94 DNA DNA 0 134 1 1154 214 10 0 chr5 18779373 18779579 -180850571 - MER58A DNA MER1_type -15 209 2 189 0 0 0 chr5 18780891 18780912 -180849238 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 296 283 71 0 chr5 18782036 18782135 -180848015 + L2 LINE L2 3207 3312 -1 1045 233 97 44 chr5 18782266 18782678 -180847472 + MLT1C LTR MaLR 34 467 0 267 247 27 130 chr5 18783295 18783441 -180846709 + Tigger8 DNA MER2_type 527 657 -9 420 271 30 98 chr5 18783910 18784113 -180846037 + LTR33 LTR ERVL 13 201 -320 382 243 179 7 chr5 18784207 18784347 -180845803 + LTR33 LTR ERVL 328 491 -30 230 336 65 43 chr5 18784622 18784854 -180845296 - MIR SINE MIR -5 257 21 490 284 110 5 chr5 18785363 18785581 -180844569 - MIR SINE MIR 0 262 22 297 304 52 52 chr5 18785679 18785873 -180844277 + L3 LINE CR1 771 964 -613 200 270 16 32 chr5 18786441 18786504 -180843646 + L3 LINE CR1 1220 1281 -296 2218 103 10 0 chr5 18786708 18787010 -180843140 + AluY SINE Alu 1 305 -6 998 124 65 0 chr5 18787011 18787164 -180842986 + AluSc SINE Alu 132 294 -15 1783 213 63 16 chr5 18787565 18788006 -180842144 + MLT1C LTR MaLR 6 467 0 224 322 123 20 chr5 18788396 18788542 -180841608 + L2 LINE L2 2944 3104 -209 1073 252 139 23 chr5 18788622 18789055 -180841095 - MLT1D LTR MaLR -2 503 21 28 29 0 0 chr5 18789134 18789169 -180840981 + AT_rich Low_complexity Low_complexity 1 35 0 195 162 0 0 chr5 18789564 18789601 -180840549 + GA-rich Low_complexity Low_complexity 2 38 0 2213 163 78 8 chr5 18790981 18791379 -180838771 - MSTB LTR MaLR 0 426 1 209 290 129 16 chr5 18791550 18791674 -180838476 - MIR3 SINE MIR -3 205 68 1201 303 197 49 chr5 18791883 18793253 -180836897 + L2 LINE L2 87 1707 -1607 6254 66 8 1 chr5 18793253 18794015 -180836135 + L1PA7 LINE L1 5373 6139 -15 1201 303 197 49 chr5 18794015 18794169 -180835981 + L2 LINE L2 1707 1837 -1477 507 254 115 90 chr5 18794224 18794755 -180835395 - HAL1 LINE L1 -100 2407 1864 1839 151 37 14 chr5 18796378 18796728 -180833422 - L1MA4 LINE L1 -7 6293 5936 322 252 103 47 chr5 18797348 18797455 -180832695 + MER5B DNA MER1_type 63 175 -3 183 318 114 0 chr5 18797534 18797622 -180832528 - L2 LINE L2 -1900 1414 1317 252 0 0 0 chr5 18798113 18798141 -180832009 + (T)n Simple_repeat Simple_repeat 1 28 0 395 327 47 0 chr5 18798635 18798785 -180831365 + MIR SINE MIR 50 206 -56 22 56 0 0 chr5 18799759 18799795 -180830355 + AT_rich Low_complexity Low_complexity 1 36 0 885 228 73 23 chr5 18801453 18801876 -180828274 + MLT1D LTR MaLR 22 503 -2 1565 160 49 45 chr5 18802212 18802500 -180827650 - AluJo SINE Alu -23 289 1 21 0 0 0 chr5 18802509 18802530 -180827620 + AT_rich Low_complexity Low_complexity 1 21 0 1467 199 10 23 chr5 18802663 18802964 -180827186 + AluJo SINE Alu 1 297 -15 375 261 164 29 chr5 18803149 18803356 -180826794 - MIR SINE MIR -8 254 20 2143 111 27 10 chr5 18803793 18804090 -180826060 + AluSq SINE Alu 3 304 -9 193 225 25 0 chr5 18804245 18804285 -180825865 - MIR SINE MIR -137 71 31 219 333 0 35 chr5 18804673 18804760 -180825390 + MIR SINE MIR 30 113 -95 371 302 107 18 chr5 18805000 18805197 -180824953 + MIR SINE MIR 3 215 -47 297 341 9 67 chr5 18805350 18805573 -180824577 - MLT1J LTR MaLR -193 318 109 899 285 10 24 chr5 18805907 18806195 -180823955 - L1MC4a LINE L1 0 7808 7525 2300 106 0 0 chr5 18807310 18807612 -180822538 - AluY SINE Alu -9 302 1 1709 142 11 4 chr5 18808601 18808869 -180821281 + L1PA11 LINE L1 5905 6174 0 294 29 0 0 chr5 18809783 18809818 -180820332 + (TAGG)n Simple_repeat Simple_repeat 1 35 0 216 0 0 0 chr5 18809819 18809843 -180820307 + (CAGA)n Simple_repeat Simple_repeat 1 24 0 252 321 28 9 chr5 18810023 18810129 -180820021 - L2 LINE L2 -948 2366 2259 1736 200 26 29 chr5 18810628 18811013 -180819137 + MER58D DNA MER1_type 3 386 0 526 313 32 36 chr5 18811051 18811285 -180818865 - MIR SINE MIR -26 236 6 474 165 35 0 chr5 18811696 18811781 -180818369 + MLT2B3 LTR ERVL 1 88 -466 1191 226 19 70 chr5 18811788 18812102 -180818048 + MLT2B3 LTR ERVL 257 554 0 247 228 94 134 chr5 18812574 18812723 -180817427 - MIR SINE MIR -118 144 2 435 234 6 126 chr5 18813177 18813344 -180816806 - MIR SINE MIR -68 194 48 1611 228 129 9 chr5 18813494 18813920 -180816230 + MLT1E LTR MaLR 111 587 -6 1591 185 27 10 chr5 18814020 18814312 -180815838 + AluJb SINE Alu 1 297 -15 184 245 0 20 chr5 18815812 18815861 -180814289 + MIR3 SINE MIR 157 204 -4 401 210 0 37 chr5 18816038 18816119 -180814031 + L2 LINE L2 3189 3266 -47 180 77 0 0 chr5 18816140 18816166 -180813984 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 22 0 0 0 chr5 18816282 18816304 -180813846 + AT_rich Low_complexity Low_complexity 1 22 0 245 222 0 0 chr5 18817366 18817411 -180812739 - MER20 DNA MER1_type 0 219 175 651 156 78 0 chr5 18817419 18817547 -180812603 + L1PA16 LINE L1 6029 6166 0 207 100 0 0 chr5 18820475 18820505 -180809645 + (CA)n Simple_repeat Simple_repeat 1 30 0 388 354 15 56 chr5 18821678 18821731 -180808419 - MIR3 SINE MIR -4 204 150 512 212 258 7 chr5 18821731 18821882 -180808268 + MER5A DNA MER1_type 1 189 0 388 354 15 56 chr5 18821882 18822026 -180808124 - MIR3 SINE MIR -58 150 15 180 0 0 0 chr5 18823374 18823394 -180806756 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 661 74 279 0 chr5 18823616 18823738 -180806412 - L1PA7 LINE L1 0 6154 5999 283 302 113 9 chr5 18825714 18825820 -180804330 + L2 LINE L2 3196 3312 -1 372 303 59 17 chr5 18825877 18825996 -180804154 + MER91A DNA MER1_type 20 143 -53 2427 61 0 3 chr5 18826256 18826552 -180803598 - AluY SINE Alu -16 295 1 2358 108 0 0 chr5 18826628 18826935 -180803215 - AluSx SINE Alu -5 307 1 1087 204 195 0 chr5 18826969 18827200 -180802950 + AluJo SINE Alu 32 307 -5 2062 122 59 6 chr5 18827208 18827545 -180802605 - THE1B LTR MaLR 0 364 10 1077 204 23 9 chr5 18827615 18827831 -180802319 - MER20 DNA MER1_type 0 219 1 658 289 29 49 chr5 18929036 18929282 -180700868 - MIR SINE MIR -13 249 9 289 342 9 18 chr5 18932611 18932722 -180697428 - L2 LINE L2 -23 3290 3181 329 332 57 16 chr5 18933025 18933218 -180696932 - L2 LINE L2 -490 2824 2624 193 326 20 31 chr5 18933219 18933317 -180696833 + MIR SINE MIR 164 260 -2 271 295 213 21 chr5 18934538 18934955 -180695195 - L2 LINE L2 -23 3290 2743 219 36 0 0 chr5 18936323 18936351 -180693799 + (TG)n Simple_repeat Simple_repeat 2 29 0 218 310 0 0 chr5 18937810 18937897 -180692253 + C-rich Low_complexity Low_complexity 1 87 0 209 277 0 50 chr5 18938000 18938101 -180692049 + C-rich Low_complexity Low_complexity 4 99 0 210 37 0 0 chr5 18938239 18938266 -180691884 + (CCG)n Simple_repeat Simple_repeat 1 27 0 21 36 0 0 chr5 18938271 18938299 -180691851 + GC_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr5 18938526 18938565 -180691585 + GC_rich Low_complexity Low_complexity 1 39 0 229 188 14 29 chr5 18938591 18938660 -180691490 + (CAG)n Simple_repeat Simple_repeat 3 70 0 851 254 37 18 chr5 18942077 18942294 -180687856 - MIR SINE MIR -34 228 8 966 260 146 31 chr5 18942429 18942875 -180687275 - MLT1G1 LTR MaLR -9 586 90 581 331 6 0 chr5 18943784 18943956 -180686194 + MIR SINE MIR 84 256 -6 1141 227 106 11 chr5 18946004 18946286 -180683864 - MER58B DNA MER1_type -1 340 32 1410 13 0 0 chr5 18946465 18946638 -180683512 + L1PA2 LINE L1 5992 6164 0 337 285 66 40 chr5 18949856 18950007 -180680143 - L2 LINE L2 -1 3312 3158 1291 232 37 92 chr5 18950062 18950550 -180679600 + MLT2B1 LTR ERVL 1 461 -59 234 0 0 0 chr5 18950550 18950576 -180679574 + (CA)n Simple_repeat Simple_repeat 2 27 0 539 177 0 0 chr5 18950585 18950664 -180679486 + Tigger5 DNA MER2_type 1 79 -2244 282 116 0 0 chr5 18950799 18950842 -180679308 + (CA)n Simple_repeat Simple_repeat 2 44 0 261 163 0 0 chr5 18950842 18950883 -180679267 + MLT2B1 LTR ERVL 477 520 0 297 294 0 0 chr5 18950886 18950971 -180679179 + L1MC3 LINE L1 6487 6571 -1214 296 297 56 146 chr5 18951970 18952239 -180677911 - L2 LINE L2 -2 3270 3065 2080 116 7 7 chr5 18952239 18952542 -180677608 - AluSc SINE Alu -6 303 1 296 297 56 146 chr5 18952542 18952773 -180677377 - L2 LINE L2 -207 3065 2815 186 280 152 45 chr5 18953327 18953591 -180676559 - L2 LINE L2 -1207 2107 1816 2218 113 0 0 chr5 18953634 18953926 -180676224 + AluSx SINE Alu 1 292 -20 2304 194 24 72 chr5 18954004 18954298 -180675852 - MER21B LTR ERV1 -3 860 553 1730 145 19 0 chr5 18954298 18954560 -180675590 + AluJb SINE Alu 2 268 -44 2304 194 24 72 chr5 18954560 18954575 -180675575 - MER21B LTR ERV1 -310 553 539 255 31 0 0 chr5 18954575 18954607 -180675543 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2304 194 24 72 chr5 18954607 18954849 -180675301 - MER21B LTR ERV1 -324 539 335 6551 93 2 0 chr5 18954849 18955691 -180674459 + THE1B-int LTR MaLR 737 1580 0 2272 141 30 25 chr5 18955691 18956053 -180674097 + THE1B LTR MaLR 1 364 0 261 337 0 12 chr5 18956544 18956630 -180673520 + L2 LINE L2 3186 3270 -2 1573 221 22 14 chr5 18956772 18957130 -180673020 - MLT1H1 LTR MaLR 0 555 195 663 224 6 60 chr5 18957130 18957313 -180672837 + MER20 DNA MER1_type 3 175 -44 277 228 129 30 chr5 18957334 18957435 -180672715 - MLT1H1 LTR MaLR -351 204 95 277 277 128 14 chr5 18957438 18957579 -180672571 - MLT1G1 LTR MaLR -438 157 1 453 276 32 19 chr5 18958211 18958367 -180671783 + Charlie8 DNA MER1_type 62 219 -2198 276 111 0 0 chr5 18958472 18958517 -180671633 + (TAA)n Simple_repeat Simple_repeat 2 46 0 383 297 77 46 chr5 18958758 18958953 -180671197 + MLT1H LTR MaLR 119 319 -230 353 244 8 32 chr5 18959085 18959208 -180670942 - L1MC5 LINE L1 -36 7925 7806 1778 166 7 0 chr5 18959723 18960013 -180670137 - AluSx SINE Alu -20 292 1 1178 239 84 22 chr5 18960085 18960490 -180669660 - L1MC/D LINE L1 -2000 5808 5379 292 175 25 12 chr5 18960490 18960570 -180669580 + (TA)n Simple_repeat Simple_repeat 2 82 0 198 71 0 0 chr5 18960571 18960599 -180669551 + (TCTA)n Simple_repeat Simple_repeat 3 30 0 648 222 86 56 chr5 18960603 18960765 -180669385 - AluJb SINE Alu -23 289 123 1272 285 87 25 chr5 18960869 18961353 -180668797 - MER34 LTR ERV1 0 542 29 600 247 0 20 chr5 18962266 18962412 -180667738 - LTR67 LTR ERVL -5 552 410 1349 260 91 29 chr5 18962704 18963188 -180666962 + MLT1E LTR MaLR 75 588 -5 189 121 0 0 chr5 18963269 18963302 -180666848 + (A)n Simple_repeat Simple_repeat 1 33 0 417 110 55 0 chr5 18963938 18964011 -180666139 - L1M4 LINE L1 -3172 2974 2898 448 276 97 21 chr5 18964244 18964389 -180665761 - MIR SINE MIR -70 192 37 2199 107 48 46 chr5 18965096 18965469 -180664681 - THE1C LTR MaLR -1 374 1 21 82 0 0 chr5 18965561 18965610 -180664540 + AT_rich Low_complexity Low_complexity 1 49 0 34 55 0 0 chr5 18965699 18965754 -180664396 + AT_rich Low_complexity Low_complexity 1 55 0 226 287 9 9 chr5 18966187 18966295 -180663855 + (TA)n Simple_repeat Simple_repeat 1 108 0 2634 175 161 141 chr5 18966410 18966878 -180663272 + L1MC3 LINE L1 6572 7029 -756 302 56 0 0 chr5 18966878 18966914 -180663236 + tRNA-Gly-GGG tRNA tRNA 1 36 -38 2634 175 161 141 chr5 18966914 18966928 -180663222 + L1MC3 LINE L1 7029 7041 -744 291 219 115 62 chr5 18966928 18967024 -180663126 + MLT1F1 LTR MaLR 36 136 -431 2634 175 161 141 chr5 18967024 18967583 -180662567 + L1MC3 LINE L1 7041 7768 -17 503 322 156 8 chr5 18967626 18968102 -180662048 - L2 LINE L2 -248 3065 2508 819 223 53 49 chr5 18968124 18968371 -180661779 + MER46C DNA MER2_type 86 333 -5 946 199 65 79 chr5 18968394 18968686 -180661464 - L1M4 LINE L1 -3480 2666 2379 766 191 41 114 chr5 18968686 18969131 -180661019 - MLT1A1 LTR MaLR 0 365 1 582 220 24 6 chr5 18969131 18969299 -180660851 - L1M4 LINE L1 -3763 2383 2213 268 308 117 25 chr5 18969803 18969923 -180660227 + MIR SINE MIR 2 132 -130 434 284 101 51 chr5 18970077 18970334 -180659816 - L2 LINE L2 0 3313 3044 21 0 0 0 chr5 18970696 18970717 -180659433 + AT_rich Low_complexity Low_complexity 1 21 0 1238 56 0 12 chr5 18971642 18971804 -180658346 + L1PA5 LINE L1 5989 6148 -6 23 33 0 0 chr5 18972388 18972418 -180657732 + AT_rich Low_complexity Low_complexity 1 30 0 361 153 86 0 chr5 18972418 18972581 -180657569 + (TA)n Simple_repeat Simple_repeat 1 177 0 33 43 0 0 chr5 18972581 18972628 -180657522 + AT_rich Low_complexity Low_complexity 1 47 0 21 57 0 0 chr5 18973627 18973662 -180656488 + AT_rich Low_complexity Low_complexity 1 35 0 268 207 0 0 chr5 18973662 18973720 -180656430 + Charlie1 DNA MER1_type 2180 2237 -524 984 164 11 5 chr5 18973735 18973924 -180656226 - L1MA8 LINE L1 -6 6285 6096 1546 72 36 18 chr5 18973924 18974145 -180656005 + L1PA10 LINE L1 5942 6167 -1 4928 177 83 1 chr5 18974147 18975772 -180654378 - L1MA4 LINE L1 -180 6120 4349 1853 158 55 0 chr5 18975865 18976193 -180653957 + MER7A DNA MER2_type 1 344 -2 197 273 55 0 chr5 18977043 18977098 -180653052 - MIR SINE MIR 0 262 205 28 0 0 0 chr5 18977392 18977420 -180652730 + AT_rich Low_complexity Low_complexity 1 28 0 398 277 73 55 chr5 18977902 18978176 -180651974 - L1MC/D LINE L1 -2213 5595 5317 310 280 84 38 chr5 18978359 18978598 -180651552 - L1MC/D LINE L1 -3314 2832 2583 958 242 68 84 chr5 18978673 18979186 -180650964 - MLT1J LTR MaLR -2 509 5 362 335 85 6 chr5 18980645 18980895 -180649255 + L1MC/D LINE L1 3889 4173 -1973 461 92 13 0 chr5 18981152 18981228 -180648922 + (CA)n Simple_repeat Simple_repeat 2 78 0 438 282 26 48 chr5 18981420 18981647 -180648503 + L1MC/D LINE L1 5602 5823 -298 1257 264 49 3 chr5 18982660 18983027 -180647123 - L1ME3 LINE L1 -1 6161 5778 447 290 0 26 chr5 18983149 18983304 -180646846 - MLT1H LTR MaLR -377 172 22 571 241 11 0 chr5 18983321 18983482 -180646668 - L1ME3 LINE L1 -537 5625 5460 232 232 0 0 chr5 18984010 18984066 -180646084 + (TCTCTG)n Simple_repeat Simple_repeat 2 57 0 627 269 55 38 chr5 18985341 18985579 -180644571 + MIR SINE MIR 15 256 -6 189 222 22 0 chr5 18986227 18986272 -180643878 - L3 LINE CR1 -16 1561 1516 747 185 109 112 chr5 18987344 18987657 -180642493 - MLT1A1 LTR MaLR -53 312 1 457 246 8 25 chr5 18987658 18987780 -180642370 - L1MC3 LINE L1 -535 7250 7131 343 312 71 24 chr5 18988651 18988821 -180641329 - MIR SINE MIR 0 262 85 2116 76 0 134 chr5 18989826 18990183 -180639967 + AluSp SINE Alu 1 309 -4 216 0 0 0 chr5 18991083 18991107 -180639043 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 308 242 121 10 chr5 18991513 18991612 -180638538 + L2 LINE L2 3190 3299 -14 220 163 82 0 chr5 18991896 18991945 -180638205 + MIR SINE MIR 209 261 -1 366 288 83 49 chr5 18992127 18992332 -180637818 - L1 LINE L1 -2375 3771 3560 930 276 91 52 chr5 18993316 18993777 -180636373 + L2 LINE L2 2421 2899 -415 2158 107 0 35 chr5 18993869 18994179 -180635971 + AluSq SINE Alu 1 299 -14 218 380 36 36 chr5 18995122 18995259 -180634891 + L2 LINE L2 3136 3272 0 228 290 32 0 chr5 18996369 18996431 -180633719 - L2 LINE L2 -224 3048 2985 1213 171 0 5 chr5 18996495 18996694 -180633456 + AluJb SINE Alu 107 304 -8 297 319 7 44 chr5 18997470 18997605 -180632545 + L2 LINE L2 3183 3312 -1 642 269 66 0 chr5 18997696 18997938 -180632212 - MIR SINE MIR 0 262 5 628 109 10 0 chr5 18998055 18998156 -180631994 + L1MB4 LINE L1 6077 6178 -2 226 211 28 70 chr5 18998581 18998652 -180631498 + L2 LINE L2 3201 3268 -4 2233 91 3 10 chr5 18999076 18999373 -180630777 + AluSx SINE Alu 5 299 -13 21 0 0 0 chr5 19000085 19000106 -180630044 + AT_rich Low_complexity Low_complexity 1 21 0 1237 214 40 3 chr5 19000136 19000440 -180629710 - MER39 LTR ERV1 0 707 393 3544 33 0 0 chr5 19000484 19000903 -180629247 + L1PA5 LINE L1 5724 6142 -12 290 291 39 0 chr5 19000918 19001050 -180629100 - MER39 LTR ERV1 -320 387 115 233 174 0 0 chr5 19001077 19001123 -180629027 - MER39 LTR ERV1 -661 46 1 477 165 72 0 chr5 19001291 19001388 -180628762 + MER58C DNA MER1_type 112 215 0 708 139 23 8 chr5 19001997 19002126 -180628024 + MER20 DNA MER1_type 30 160 -59 1072 125 20 50 chr5 19002858 19003058 -180627092 + MER31A LTR ERV1 1 194 -291 807 239 27 0 chr5 19003870 19004054 -180626096 - AluJo SINE Alu -4 308 120 419 307 101 51 chr5 19004056 19004431 -180625719 - L1MC/D LINE L1 -456 5665 5394 1512 190 133 12 chr5 19004441 19004841 -180625309 - MER39 LTR ERV1 0 707 260 1256 172 96 98 chr5 19004847 19005213 -180624937 - MLT1A1 LTR MaLR 0 365 1 1028 148 0 13 chr5 19005515 19005670 -180624480 - AluJb SINE Alu -18 294 142 432 217 42 28 chr5 19005676 19005819 -180624331 + L1MA9 LINE L1 6143 6287 -25 4454 209 15 41 chr5 19005854 19006884 -180623266 + L1PA11 LINE L1 3 1005 -6576 11401 88 2 1 chr5 19006891 19008451 -180621699 - THE1B-int LTR MaLR -18 1562 1 1785 122 131 24 chr5 19008451 19008780 -180621370 - THE1B LTR MaLR 0 364 1 20685 155 8 10 chr5 19008780 19013651 -180616499 + L1PA11 LINE L1 2680 7551 -61 218 32 32 0 chr5 19013934 19013965 -180616185 + (TC)n Simple_repeat Simple_repeat 1 32 0 517 297 36 12 chr5 19014344 19014509 -180615641 - MIR SINE MIR -59 203 35 2435 118 30 57 chr5 19014526 19014966 -180615184 + MSTA LTR MaLR 1 428 0 2138 143 31 8 chr5 19014982 19015338 -180614812 + THE1B LTR MaLR 1 364 0 387 351 30 71 chr5 19015634 19015973 -180614177 + L1MEd LINE L1 244 568 -5551 2657 168 48 5 chr5 19016296 19016856 -180613294 + L1PB4 LINE L1 5573 6156 0 791 234 15 10 chr5 19017199 19017400 -180612750 - MER45C DNA AcHobo -751 202 1 284 179 77 6 chr5 19017400 19017477 -180612673 - MER90 LTR ERV1 -526 88 1 553 278 115 86 chr5 19017478 19017849 -180612301 - HAL1 LINE L1 -1873 634 233 507 119 24 0 chr5 19017849 19017977 -180612173 + L1PB1 LINE L1 6053 6182 0 553 278 115 86 chr5 19017977 19018218 -180611932 - HAL1 LINE L1 -2274 233 1 659 264 68 0 chr5 19018862 19019010 -180611140 - MER63A DNA MER1_type 0 210 53 3289 326 130 26 chr5 19021077 19023197 -180606953 - L2 LINE L2 0 3313 863 2039 116 71 14 chr5 19023197 19023550 -180606600 + THE1C LTR MaLR 1 373 -2 3289 326 130 26 chr5 19023550 19024197 -180605953 - L2 LINE L2 -2450 863 285 394 232 101 43 chr5 19024209 19024347 -180605803 - L2 LINE L2 -1 3312 3167 1832 200 42 26 chr5 19024628 19025083 -180605067 - MLT1C LTR MaLR 0 467 6 1468 174 82 55 chr5 19025339 19025719 -180604431 + MLT1B LTR MaLR 1 390 0 216 217 0 0 chr5 19025844 19025890 -180604260 - L2 LINE L2 -5 3308 3263 637 244 167 9 chr5 19026982 19027203 -180602947 + MIR SINE MIR 2 257 -5 207 0 0 0 chr5 19027672 19027695 -180602455 + (A)n Simple_repeat Simple_repeat 1 23 0 22 0 0 0 chr5 19028446 19028468 -180601682 + AT_rich Low_complexity Low_complexity 1 22 0 386 340 20 7 chr5 19030262 19030409 -180599741 + MER5A DNA MER1_type 40 188 -1 659 315 37 42 chr5 19030525 19030928 -180599222 + L2 LINE L2 2544 2944 -370 565 286 172 54 chr5 19032170 19032655 -180597495 - MLT1H1 LTR MaLR 0 555 16 413 289 78 94 chr5 19032665 19033038 -180597112 + L2 LINE L2 2946 3312 -1 180 333 14 0 chr5 19033474 19033546 -180596604 - MIR SINE MIR -1 261 189 27 73 0 0 chr5 19034818 19034873 -180595277 + AT_rich Low_complexity Low_complexity 1 55 0 5858 149 13 24 chr5 19035146 19036287 -180593863 + L1MA4 LINE L1 5160 6296 -4 23 33 0 0 chr5 19036287 19036317 -180593833 + AT_rich Low_complexity Low_complexity 1 30 0 1042 186 11 0 chr5 19037625 19037808 -180592342 - MER58A DNA MER1_type 0 224 40 5064 158 12 63 chr5 19037808 19038633 -180591517 + L1MA9 LINE L1 5117 5873 -439 2616 146 14 9 chr5 19038633 19039059 -180591091 + MSTA LTR MaLR 1 428 0 5064 158 12 63 chr5 19039059 19039454 -180590696 + L1MA9 LINE L1 5873 6287 -25 1839 164 37 11 chr5 19040222 19040576 -180589574 + L1MC1 LINE L1 5968 6330 -3 1191 251 152 15 chr5 19040778 19041294 -180588856 + MLT1G1 LTR MaLR 5 557 -10 22 0 0 0 chr5 19041580 19041602 -180588548 + AT_rich Low_complexity Low_complexity 1 22 0 273 145 14 29 chr5 19042563 19042632 -180587518 + CT-rich Low_complexity Low_complexity 1 68 0 423 309 104 31 chr5 19042708 19042996 -180587154 - MLT1L LTR MaLR -157 458 150 270 394 32 36 chr5 19043112 19043642 -180586508 + L2 LINE L2 2048 2575 -739 321 298 41 8 chr5 19043741 19043862 -180586288 + L2 LINE L2 3159 3283 -30 181 365 14 0 chr5 19044199 19044273 -180585877 + MIR3 SINE MIR 133 207 -1 308 281 243 29 chr5 19044920 19045083 -180585067 - MIR3 SINE MIR -66 142 7 534 316 73 66 chr5 19045393 19046243 -180583907 + L1MEc LINE L1 22 877 -5519 591 284 64 56 chr5 19046353 19046726 -180583424 + L1MEc LINE L1 1438 1813 -4583 201 154 0 0 chr5 19046788 19046827 -180583323 + T-rich Low_complexity Low_complexity 2 40 0 1769 251 139 9 chr5 19046854 19047772 -180582378 + L1MEc LINE L1 2623 3660 -2555 2258 126 0 3 chr5 19047825 19048134 -180582016 - AluSc SINE Alu -1 308 1 819 236 219 0 chr5 19048416 19048726 -180581424 + L2 LINE L2 1735 2112 -1202 317 212 64 136 chr5 19048736 19048874 -180581276 + MER112 DNA MER1_type 40 156 -104 5201 146 19 36 chr5 19048874 19049793 -180580357 - MER4D LTR ERV1 0 903 1 317 212 64 136 chr5 19049793 19049890 -180580260 + MER112 DNA MER1_type 156 258 -2 1726 315 134 10 chr5 19049894 19050949 -180579201 + L2 LINE L2 2118 3311 -2 2827 97 2 15 chr5 19050966 19051368 -180578782 + MSTA-int LTR MaLR 1184 1580 0 1473 153 216 46 chr5 19051368 19051734 -180578416 + MSTA LTR MaLR 1 428 0 314 310 138 76 chr5 19052114 19052511 -180577639 - L2 LINE L2 -1 3271 2850 315 335 102 42 chr5 19052636 19053117 -180577033 - L2 LINE L2 -665 2649 2140 303 206 55 0 chr5 19053670 19053743 -180576407 + MER69 DNA AcHobo 2450 2526 0 21 82 0 0 chr5 19053780 19053829 -180576321 + AT_rich Low_complexity Low_complexity 1 49 0 2059 120 0 0 chr5 19054267 19054558 -180575592 - AluSx SINE Alu -9 303 13 498 99 0 0 chr5 19054810 19054881 -180575269 + Alu SINE Alu 233 303 -6 320 286 122 0 chr5 19055136 19055234 -180574916 + MIR SINE MIR 37 146 -62 370 283 101 44 chr5 19055779 19055938 -180574212 - MIR3 SINE MIR -20 188 21 309 265 82 41 chr5 19056840 19056938 -180573212 + MIR SINE MIR 42 143 -65 267 191 103 0 chr5 19057588 19057656 -180572494 + L2 LINE L2 3221 3295 -18 200 246 88 35 chr5 19058364 19058421 -180571729 + MIR SINE MIR 84 143 -65 554 175 103 0 chr5 19058726 19058852 -180571298 - MER69 DNA AcHobo -5 2521 2383 290 279 174 75 chr5 19058964 19059125 -180571025 - MER5A DNA MER1_type 0 189 13 1998 233 100 50 chr5 19059275 19059446 -180570704 + Charlie2 DNA MER1_type 1858 2019 -843 1588 181 28 21 chr5 19059446 19059733 -180570417 + AluJo SINE Alu 1 289 -23 1998 233 100 50 chr5 19059733 19059830 -180570320 + Charlie2 DNA MER1_type 2019 2110 -752 1903 86 12 0 chr5 19059830 19060086 -180570064 - L1PA11 LINE L1 -5 6169 5911 1998 233 100 50 chr5 19060086 19060773 -180569377 + Charlie2 DNA MER1_type 2110 2862 0 1523 185 52 37 chr5 19060954 19061354 -180568796 - MLT1C LTR MaLR -2 388 1 537 305 80 25 chr5 19061370 19061882 -180568268 + L2 LINE L2 2005 2611 -703 191 278 37 0 chr5 19061884 19061938 -180568212 + L2 LINE L2 2756 2811 -503 1147 254 27 19 chr5 19061939 19062313 -180567837 + LTR37B LTR ERV1 77 453 -15 2027 125 3 22 chr5 19062456 19062811 -180567339 - AluSx SINE Alu 0 349 1 223 209 0 0 chr5 19062474 19062828 -180567322 + CT-rich Low_complexity Low_complexity 2 44 0 1424 126 22 37 chr5 19063556 19063827 -180566323 + L1MA8 LINE L1 6020 6286 -5 269 203 16 16 chr5 19064320 19064384 -180565766 + MER31-int LTR ERV1 3400 3463 -1473 915 229 30 60 chr5 19064700 19064832 -180565318 + MER99 DNA DNA 569 691 -137 2045 141 7 0 chr5 19064832 19065130 -180565020 - AluSx SINE Alu -11 301 2 915 229 30 60 chr5 19065130 19065264 -180564886 + MER99 DNA DNA 691 827 -1 1416 191 47 42 chr5 19065265 19065668 -180564482 + LTR37B LTR ERV1 57 461 -7 193 337 50 30 chr5 19065759 19065860 -180564290 + L2 LINE L2 3151 3253 -19 7462 86 16 6 chr5 19066068 19067220 -180562930 + L1MA1 LINE L1 5141 6302 0 365 244 144 82 chr5 19067542 19067910 -180562240 + MER110 LTR ERV1 80 440 -51 1031 233 0 0 chr5 19068836 19069042 -180561108 - MER58A DNA MER1_type 0 224 19 26 0 0 0 chr5 19069547 19069573 -180560577 + AT_rich Low_complexity Low_complexity 1 26 0 862 132 0 7 chr5 19070518 19070654 -180559496 + MLT2B2 LTR ERVL 5 139 -376 611 229 0 0 chr5 19070657 19070762 -180559388 + FLAM_A SINE Alu 12 116 -26 1029 202 19 38 chr5 19070769 19071048 -180559102 + MLT2B1 LTR ERVL 132 457 -63 1808 177 32 6 chr5 19071048 19071387 -180558763 + MER7A DNA MER2_type 1 346 0 1029 202 19 38 chr5 19071387 19071449 -180558701 + MLT2B1 LTR ERVL 457 519 -1 9541 26 10 206 chr5 19071803 19073528 -180556622 - SVA Other Other 0 1386 1 4128 55 19 21 chr5 19073736 19074303 -180555847 - SVA Other Other -820 566 1 33 0 0 0 chr5 19074463 19074496 -180555654 + AT_rich Low_complexity Low_complexity 1 33 0 1178 222 62 19 chr5 19074591 19074734 -180555416 + MLT1C LTR MaLR 87 222 -245 3265 179 136 22 chr5 19074734 19075475 -180554675 + LTR1B LTR ERV1 1 826 0 1178 222 62 19 chr5 19075475 19075701 -180554449 + MLT1C LTR MaLR 222 467 0 263 278 19 9 chr5 19075701 19075808 -180554342 - MER97c DNA MER1_type? -221 869 762 1862 203 150 61 chr5 19076100 19076838 -180553312 - LTR1B LTR ERV1 -13 813 10 1916 252 39 22 chr5 19076917 19077512 -180552638 - MER97c DNA MER1_type? -485 605 1 1429 161 61 21 chr5 19077543 19077924 -180552226 - MLT1C LTR MaLR 0 390 1 284 274 43 12 chr5 19078809 19078914 -180551236 - MIR SINE MIR -90 118 9 265 269 10 58 chr5 19081053 19081157 -180548993 + MLT1J LTR MaLR 35 133 -378 478 125 0 12 chr5 19081169 19081249 -180548901 - MSTA LTR MaLR 0 428 350 717 118 0 10 chr5 19081250 19081352 -180548798 - AluSg SINE Alu -209 101 1 1691 84 0 0 chr5 19081353 19081580 -180548570 - THE1A LTR MaLR -118 237 11 981 158 0 12 chr5 19081749 19081913 -180548237 + FRAM SINE Alu 3 164 -2 375 237 114 38 chr5 19082223 19082434 -180547716 - L1MC5 LINE L1 -35 7926 7700 1528 96 9 32 chr5 19082438 19082656 -180547494 + AluSp SINE Alu 90 302 -11 706 296 108 76 chr5 19083073 19083622 -180546528 - L2 LINE L2 0 3313 2738 1739 284 100 101 chr5 19083633 19085428 -180544722 - L2 LINE L2 -729 2585 793 509 270 8 0 chr5 19085437 19085563 -180544587 + MER33 DNA MER1_type 1 127 -197 998 304 44 44 chr5 19086460 19086911 -180543239 - L2 LINE L2 0 3313 2863 1105 208 38 58 chr5 19086944 19086985 -180543165 + MER96B DNA MER1_type? 25 65 -352 7532 32 0 1 chr5 19086985 19087886 -180542264 + L1PA4 LINE L1 5254 6153 -2 1105 208 38 58 chr5 19087886 19088244 -180541906 + MER96B DNA MER1_type? 65 416 -1 4649 188 54 20 chr5 19088282 19089357 -180540793 - L1MC3 LINE L1 0 7785 6675 27 29 0 0 chr5 19089468 19089502 -180540648 + AT_rich Low_complexity Low_complexity 1 34 0 201 196 0 0 chr5 19089766 19089812 -180540338 + CT-rich Low_complexity Low_complexity 4 49 0 977 180 41 8 chr5 19089931 19090175 -180539975 + MER65A-int LTR ERV1 5429 5680 -651 1338 256 50 27 chr5 19090182 19090662 -180539488 + MER65A-int LTR ERV1 4381 4871 0 1382 209 85 40 chr5 19090662 19091084 -180539066 + MER65A LTR ERV1 1 441 -4 933 333 85 9 chr5 19091120 19091669 -180538481 + L2 LINE L2 2714 3301 -12 372 43 0 0 chr5 19091800 19091846 -180538304 + (CA)n Simple_repeat Simple_repeat 2 47 0 206 192 19 0 chr5 19091851 19091903 -180538247 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 6636 206 10 11 chr5 19092304 19093856 -180536294 - L1P LINE L1 -2583 3563 2013 8178 172 13 21 chr5 19093859 19096358 -180533792 + L1PA13 LINE L1 3620 6159 -4 230 79 0 26 chr5 19096388 19096426 -180533724 + (TTCC)n Simple_repeat Simple_repeat 4 40 0 273 330 146 0 chr5 19097581 19097684 -180532466 - L2 LINE L2 -5 3308 3191 1057 224 149 17 chr5 19098022 19098424 -180531726 + L1MC4 LINE L1 7438 7892 -150 1797 173 35 3 chr5 19098469 19098811 -180531339 - MLT2C2 LTR ERVL -111 353 1 283 311 74 7 chr5 19098857 19098992 -180531158 - L2 LINE L2 -924 2390 2247 313 278 20 80 chr5 19099311 19099397 -180530753 + MIR SINE MIR 65 140 -122 2428 103 0 0 chr5 19099397 19099709 -180530441 + AluSq SINE Alu 1 312 -1 313 278 20 80 chr5 19099709 19099773 -180530377 + MIR SINE MIR 140 206 -56 2494 64 0 0 chr5 19099837 19100134 -180530016 + AluY SINE Alu 1 297 -14 509 182 101 0 chr5 19100835 19100934 -180529216 - L2 LINE L2 -4 3309 3201 180 371 57 0 chr5 19100943 19101013 -180529137 - L2 LINE L2 -10 3262 3189 3371 169 13 2 chr5 19101143 19101746 -180528404 - MER72 LTR ERV1 -22 700 91 25 0 0 0 chr5 19102130 19102155 -180527995 + AT_rich Low_complexity Low_complexity 1 25 0 180 77 0 0 chr5 19102293 19102319 -180527831 + (CA)n Simple_repeat Simple_repeat 2 27 0 328 410 87 3 chr5 19102349 19102659 -180527491 - L2 LINE L2 -512 2802 2467 197 274 53 95 chr5 19103770 19103865 -180526285 - MER5A DNA MER1_type -7 182 92 182 271 51 34 chr5 19104990 19105049 -180525101 + MIR3 SINE MIR 118 177 -31 24 0 0 0 chr5 19105111 19105135 -180525015 + AT_rich Low_complexity Low_complexity 1 24 0 3583 134 4 11 chr5 19105563 19106094 -180524056 - MER1A DNA MER1_type 0 527 1 210 301 68 80 chr5 19106218 19106394 -180523756 + L3b LINE CR1 1322 1495 -88 222 37 0 0 chr5 19106395 19106422 -180523728 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 218 254 91 0 chr5 19106739 19106794 -180523356 + L3 LINE CR1 1425 1484 -93 528 221 8 25 chr5 19108179 19108301 -180521849 + MER94 DNA DNA 3 122 -12 22 0 0 0 chr5 19110211 19110233 -180519917 + AT_rich Low_complexity Low_complexity 1 22 0 734 189 47 21 chr5 19110545 19110735 -180519415 - MER20 DNA MER1_type -7 212 18 3789 155 138 7 chr5 19110821 19111551 -180518599 + LTR1B LTR ERV1 1 826 0 200 215 46 15 chr5 19111639 19111704 -180518446 - L3b LINE CR1 -197 1386 1320 415 134 98 0 chr5 19113920 19114002 -180516148 - MER34C LTR ERV1 0 585 496 1253 162 13 0 chr5 19114005 19114240 -180515910 + L1MA8 LINE L1 4817 5054 -1092 3729 147 30 4 chr5 19114346 19115221 -180514929 + L1MA8 LINE L1 5024 5912 -379 1922 190 16 13 chr5 19115221 19115605 -180514545 + MSTD LTR MaLR 1 385 -11 1799 131 31 47 chr5 19115607 19115988 -180514162 + L1MA8 LINE L1 5909 6283 -8 1647 206 42 44 chr5 19116010 19116486 -180513664 - MER34B LTR ERV1 -80 485 11 2162 252 136 8 chr5 19116496 19117415 -180512735 - L1ME3A LINE L1 -97 6073 5023 368 257 68 47 chr5 19117755 19117903 -180512247 - MIR SINE MIR -38 224 74 234 0 0 0 chr5 19118845 19118871 -180511279 + (A)n Simple_repeat Simple_repeat 1 26 0 407 223 19 0 chr5 19119234 19119337 -180510813 - Charlie4 DNA MER1_type -1829 132 28 400 204 57 70 chr5 19121208 19121365 -180508785 - Charlie4 DNA MER1_type 0 1961 1807 7755 158 39 28 chr5 19121365 19123068 -180507082 + L1MEc LINE L1 1 1806 -4620 1237 151 75 0 chr5 19123168 19123407 -180506743 - Tigger1 DNA MER2_type -2159 259 3 259 219 14 0 chr5 19123409 19123482 -180506668 - MER82 DNA MER2_type -453 200 127 2350 146 24 16 chr5 19123543 19123967 -180506183 - MSTA LTR MaLR 0 428 2 479 275 72 48 chr5 19123995 19124369 -180505781 - L1ME LINE L1 -471 5691 5309 390 291 106 20 chr5 19124574 19124828 -180505322 - L1ME LINE L1 -966 5180 4905 358 207 193 0 chr5 19124843 19124983 -180505167 - L1ME LINE L1 -1497 4649 4483 22 0 0 0 chr5 19125075 19125097 -180505053 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 19125134 19125177 -180504973 + AT_rich Low_complexity Low_complexity 1 43 0 267 261 59 17 chr5 19125187 19125306 -180504844 - L1ME LINE L1 -1954 4192 4069 2178 165 48 10 chr5 19126810 19127209 -180502941 - MLT2D LTR ERVL 0 414 1 628 76 0 0 chr5 19127210 19127302 -180502848 + L1PB1 LINE L1 6060 6151 0 2405 67 0 17 chr5 19127875 19128173 -180501977 - AluY SINE Alu -18 293 1 1995 118 0 0 chr5 19128307 19128586 -180501564 - AluY SINE Alu -32 279 1 2107 123 6 19 chr5 19128607 19128923 -180501227 - AluSx SINE Alu 0 312 1 2072 197 35 38 chr5 19128925 19129531 -180500619 + L1MEc LINE L1 2031 2600 -4007 1777 177 14 3 chr5 19129531 19129825 -180500325 + AluJb SINE Alu 1 297 -15 2072 197 35 38 chr5 19129825 19129945 -180500205 + L1MEc LINE L1 2600 2719 -3888 653 117 48 19 chr5 19129947 19130050 -180500100 + AluSx SINE Alu 3 108 -205 471 70 0 0 chr5 19130075 19130146 -180500004 + L1MC1 LINE L1 1926 1996 -4430 1476 116 14 0 chr5 19130146 19130353 -180499797 + AluSx SINE Alu 88 297 -15 7843 203 86 18 chr5 19130353 19132242 -180497908 + L1MC1 LINE L1 2672 4431 -2182 1123 214 78 42 chr5 19132242 19132574 -180497576 + MER2 DNA MER2_type 1 344 0 7843 203 86 18 chr5 19132574 19134348 -180495802 + L1MC1 LINE L1 4431 6600 -13 22 35 0 0 chr5 19134348 19134377 -180495773 + AT_rich Low_complexity Low_complexity 1 29 0 1013 188 79 4 chr5 19134383 19134649 -180495501 - Charlie4a DNA MER1_type -153 355 70 30480 39 34 5 chr5 19134661 19138682 -180491468 + L1PA3 LINE L1 2 4139 -2007 8650 24 2 0 chr5 19138782 19140566 -180489584 + L1PA3 LINE L1 4369 6154 -1 219 239 130 33 chr5 19140602 19140694 -180489456 - MIR SINE MIR -66 196 96 963 75 0 0 chr5 19140943 19141077 -180489073 + L1PA2 LINE L1 6022 6155 0 272 221 44 0 chr5 19141082 19141150 -180489000 - Charlie4a DNA MER1_type -421 87 17 1681 182 48 31 chr5 19141378 19141736 -180488414 + MLT1A1 LTR MaLR 1 364 -1 263 234 32 32 chr5 19142142 19142236 -180487914 + MLT1I LTR MaLR 291 384 -25 1195 200 39 60 chr5 19142557 19142926 -180487224 + MLT1A2 LTR MaLR 11 374 0 550 303 144 5 chr5 19143155 19143350 -180486800 - MIR SINE MIR -25 237 16 2040 82 3 57 chr5 19143520 19143851 -180486299 - L1PA13 LINE L1 -2 6161 5849 256 139 292 14 chr5 19143932 19144004 -180486146 + MER39 LTR ERV1 1 92 -615 478 165 91 0 chr5 19144014 19144135 -180486015 + LTR48 LTR ERV1 177 308 -479 516 234 98 61 chr5 19144144 19144478 -180485672 + LTR48 LTR ERV1 238 774 0 544 283 58 0 chr5 19144558 19144749 -180485401 - L2 LINE L2 0 3313 3112 3939 148 21 27 chr5 19144968 19145683 -180484467 - MER50 LTR ERV1 -23 711 1 1162 214 132 82 chr5 19146123 19146455 -180483695 + MLT1E2 LTR MaLR 111 477 -149 2351 99 3 0 chr5 19146455 19146767 -180483383 - AluSp SINE Alu 0 313 1 1162 214 132 82 chr5 19146767 19146925 -180483225 + MLT1E2 LTR MaLR 477 626 0 315 49 0 0 chr5 19147782 19147823 -180482327 + (TTAGGG)n Simple_repeat Simple_repeat 3 43 0 1561 177 9 47 chr5 19148035 19148352 -180481798 + AluJo SINE Alu 1 305 -7 190 261 43 0 chr5 19148659 19148705 -180481445 - L2 LINE L2 -8 3264 3217 * 476 256 135 42 chr5 19148674 19148889 -180481261 - MIR SINE MIR -19 243 9 227 219 207 0 chr5 19148954 19149036 -180481114 + HsTC2 DNA Tc2 7 105 -1793 22 0 0 0 chr5 19149083 19149105 -180481045 + AT_rich Low_complexity Low_complexity 1 22 0 296 260 10 50 chr5 19149117 19149217 -180480933 - L1MEd LINE L1 -5585 534 439 21 0 0 0 chr5 19149367 19149388 -180480762 + AT_rich Low_complexity Low_complexity 1 21 0 599 221 32 25 chr5 19149553 19149780 -180480370 - MER34 LTR ERV1 -45 520 273 347 252 38 15 chr5 19150214 19150345 -180479805 - MER65A LTR ERV1 -311 134 1 445 236 18 9 chr5 19150363 19150473 -180479677 - MER34 LTR ERV1 -431 111 1 1269 226 53 55 chr5 19150508 19150942 -180479208 - LTR47B LTR ERVL 0 443 11 270 0 0 0 chr5 19150953 19150983 -180479167 + (CA)n Simple_repeat Simple_repeat 2 31 0 198 167 0 0 chr5 19151374 19151410 -180478740 + (CA)n Simple_repeat Simple_repeat 1 36 0 2287 89 0 19 chr5 19151663 19151976 -180478174 + AluSx SINE Alu 1 307 -5 260 270 27 14 chr5 19151976 19152050 -180478100 + MER21B LTR ERV1 16 90 -773 423 268 33 55 chr5 19152103 19152274 -180477876 + MER21B LTR ERV1 98 266 -597 6305 148 34 12 chr5 19152274 19153469 -180476681 + L1PA11 LINE L1 4282 5518 -656 2272 84 14 3 chr5 19153469 19153765 -180476385 + AluY SINE Alu 1 299 -12 6305 148 34 12 chr5 19153765 19154436 -180475714 + L1PA11 LINE L1 5518 6173 -1 241 245 10 51 chr5 19154436 19154534 -180475616 - LTR55 LTR ERV -43 505 412 423 268 33 55 chr5 19154436 19154447 -180475703 + MER21B LTR ERV1 266 276 -587 442 166 18 142 chr5 19154652 19154821 -180475329 - MLT1A1 LTR MaLR -217 148 1 351 109 0 31 chr5 19154821 19154885 -180475265 - L1MA10 LINE L1 -48 6286 6225 11426 98 3 6 chr5 19155146 19156865 -180473285 - L1PA8 LINE L1 -948 5198 3485 6975 54 8 6 chr5 19156868 19157842 -180472308 + L1PA8 LINE L1 5184 6159 -13 1831 157 69 5 chr5 19158157 19158533 -180471617 - MSTA LTR MaLR -28 400 1 1167 297 144 19 chr5 19158533 19159308 -180470842 - L2 LINE L2 -71 3242 2367 651 165 30 8 chr5 19159490 19159623 -180470527 + Charlie4 DNA MER1_type 1826 1961 0 1695 186 0 3 chr5 19159646 19159953 -180470197 - LOR1a LTR ERV1 0 497 192 2428 108 32 2 chr5 19159953 19160353 -180469797 + LOR1-int LTR ERV1 2946 3357 -4763 1114 167 35 18 chr5 19160365 19160593 -180469557 + LOR1a LTR ERV1 266 497 0 2915 264 194 24 chr5 19160595 19161729 -180468421 - L2 LINE L2 -1113 2201 794 2334 113 0 0 chr5 19161729 19162029 -180468121 + AluSx SINE Alu 1 300 -12 2915 264 194 24 chr5 19162029 19162263 -180467887 - L2 LINE L2 -2520 794 601 482 315 289 3 chr5 19163019 19163330 -180466820 + L2 LINE L2 2908 3307 -6 239 152 0 0 chr5 19164242 19164288 -180465862 + LTR66 LTR ERVL 394 439 -171 348 127 0 0 chr5 19164290 19164345 -180465805 + (TA)n Simple_repeat Simple_repeat 2 56 0 182 150 25 0 chr5 19164860 19164900 -180465250 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 252 289 184 0 chr5 19165495 19165609 -180464541 + MIR3 SINE MIR 55 189 -19 1102 64 0 14 chr5 19165738 19165879 -180464271 + Alu SINE Alu 166 304 -7 225 247 236 0 chr5 19165908 19165997 -180464153 + MER5B DNA MER1_type 62 171 -7 267 276 0 0 chr5 19166675 19166733 -180463417 + MER81 DNA DNA 55 112 -2 693 259 79 40 chr5 19167594 19168015 -180462135 - LTR33 LTR ERVL -3 518 49 527 202 101 17 chr5 19168124 19168243 -180461907 + L2 LINE L2 3182 3310 -3 554 271 54 12 chr5 19168568 19168734 -180461416 + MER5B DNA MER1_type 6 178 0 183 170 75 38 chr5 19169109 19169162 -180460988 - MIR SINE MIR -72 190 136 424 298 103 4 chr5 19169504 19169837 -180460313 + L2 LINE L2 2781 3146 -167 856 299 12 8 chr5 19169846 19170100 -180460050 - MIR SINE MIR 0 262 8 234 266 0 0 chr5 19170121 19170185 -180459965 + L2 LINE L2 3167 3230 -83 2247 109 3 10 chr5 19170228 19170539 -180459611 - AluSx SINE Alu -3 309 1 303 301 24 0 chr5 19170544 19170627 -180459523 + L2 LINE L2 3225 3309 -4 210 37 0 0 chr5 19171220 19171247 -180458903 + (CA)n Simple_repeat Simple_repeat 1 27 0 2133 119 3 6 chr5 19173830 19174141 -180456009 - AluSx SINE Alu -1 311 2 234 0 0 0 chr5 19174600 19174626 -180455524 + (TG)n Simple_repeat Simple_repeat 2 27 0 1487 206 14 3 chr5 19174626 19174918 -180455232 - MLT1A1 LTR MaLR -3 362 68 429 20 0 0 chr5 19175016 19175066 -180455084 + (TG)n Simple_repeat Simple_repeat 1 50 0 226 284 12 37 chr5 19175360 19175441 -180454709 + L2 LINE L2 3108 3186 -86 * 285 293 193 19 chr5 19175437 19175649 -180454501 - MIR SINE MIR -13 249 1 25 31 0 0 chr5 19177123 19177155 -180452995 + AT_rich Low_complexity Low_complexity 1 32 0 282 119 0 2 chr5 19177156 19177206 -180452944 + L1M3 LINE L1 5474 5522 -649 678 263 10 36 chr5 19177327 19177521 -180452629 + Charlie1a DNA MER1_type 4 192 -1263 1145 224 65 63 chr5 19177527 19177957 -180452193 + MER39 LTR ERV1 1 619 -88 4877 195 25 23 chr5 19178025 19179057 -180451093 + Charlie1a DNA MER1_type 194 1227 -228 994 186 38 113 chr5 19179062 19179380 -180450770 - L1MA7 LINE L1 -22 6290 5997 620 209 139 11 chr5 19179381 19179568 -180450582 + Charlie1a DNA MER1_type 1245 1455 0 182 300 33 17 chr5 19180628 19180688 -180449462 - MIR SINE MIR -200 62 2 273 98 0 0 chr5 19180757 19180798 -180449352 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 225 0 0 0 chr5 19180924 19180949 -180449201 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2375 181 66 70 chr5 19181325 19181867 -180448283 - MLT1F LTR MaLR 0 542 3 281 344 91 82 chr5 19182193 19182533 -180447617 - L2 LINE L2 -105 3167 2825 827 305 82 77 chr5 19183296 19184216 -180445934 - L1MEd LINE L1 -5192 927 4 207 300 33 0 chr5 19185481 19185541 -180444609 + MIR SINE MIR 9 70 -192 2265 175 8 3 chr5 19185569 19185952 -180444198 + MLT1B LTR MaLR 6 390 0 2219 147 73 52 chr5 19185996 19186056 -180444094 - MSTB1 LTR MaLR 0 432 375 2375 97 0 3 chr5 19186056 19186364 -180443786 - AluY SINE Alu -4 307 1 2219 147 73 52 chr5 19186364 19186726 -180443424 - MSTB1 LTR MaLR -57 375 1 2749 23 0 0 chr5 19186746 19187049 -180443101 + AluYb8 SINE Alu 1 303 -15 219 36 0 0 chr5 19187049 19187077 -180443073 + (TTAA)n Simple_repeat Simple_repeat 4 31 0 21 36 0 0 chr5 19187184 19187212 -180442938 + AT_rich Low_complexity Low_complexity 1 28 0 2055 155 0 0 chr5 19191053 19191356 -180438794 + AluSx SINE Alu 1 303 -9 239 216 59 0 chr5 19191614 19191665 -180438485 - MER82 DNA MER2_type -395 258 205 2117 80 77 0 chr5 19191666 19191952 -180438198 + AluY SINE Alu 1 308 -3 1980 157 40 3 chr5 19191976 19192327 -180437823 - Tigger1 DNA MER2_type 0 2418 2055 39157 82 16 6 chr5 19192332 19198415 -180431735 - L1PA6 LINE L1 0 6154 11 4389 125 68 1 chr5 19198433 19199121 -180431029 - Tigger1 DNA MER2_type -334 2084 1351 * 6893 130 50 2 chr5 19199107 19200167 -180429983 - Tigger1 DNA MER2_type -1305 1113 3 292 219 14 0 chr5 19200169 19200242 -180429908 - MER82 DNA MER2_type -453 200 127 626 282 66 48 chr5 19200244 19200303 -180429847 - L1ME LINE L1 -396 5774 5718 2550 146 24 16 chr5 19200303 19200727 -180429423 - MSTA LTR MaLR 0 428 2 626 282 66 48 chr5 19200727 19201130 -180429020 - L1ME LINE L1 -452 5718 5309 290 245 168 34 chr5 19201234 19201532 -180428618 - L1ME LINE L1 -846 5300 4963 255 228 297 43 chr5 19201604 19202069 -180428081 - L1ME LINE L1 -1497 4649 4067 2353 168 48 10 chr5 19203572 19203971 -180426179 - MLT2D LTR ERVL 0 414 1 675 76 0 0 chr5 19203972 19204064 -180426086 + L1PB1 LINE L1 6060 6151 0 2421 71 0 14 chr5 19204637 19204934 -180425216 - AluY SINE Alu -18 293 1 2234 125 0 0 chr5 19205028 19205333 -180424817 - AluSx SINE Alu -7 305 1 214 233 0 0 chr5 19205746 19205789 -180424361 - L2 LINE L2 -2 3311 3269 1183 184 142 63 chr5 19207133 19207464 -180422686 + MLT1A1 LTR MaLR 1 357 -8 424 246 25 34 chr5 19207594 19207740 -180422410 + MIR SINE MIR 27 172 -63 230 274 17 120 chr5 19207943 19208060 -180422090 + MER5B DNA MER1_type 6 110 -68 236 109 0 22 chr5 19208913 19208959 -180421191 + (CA)n Simple_repeat Simple_repeat 2 46 0 183 156 0 0 chr5 19208961 19208993 -180421157 + (TG)n Simple_repeat Simple_repeat 1 32 0 303 335 164 7 chr5 19209188 19209340 -180420810 - MLT1L LTR MaLR -88 527 352 723 253 40 20 chr5 19209934 19210132 -180420018 - MLT1A2 LTR MaLR -16 358 157 615 202 8 0 chr5 19210224 19210343 -180419807 + MER96B DNA MER1_type? 298 417 0 21 71 0 0 chr5 19210411 19210453 -180419697 + AT_rich Low_complexity Low_complexity 1 42 0 297 320 33 53 chr5 19211543 19211693 -180418457 + MIR3 SINE MIR 30 176 -32 1613 222 57 22 chr5 19211979 19212531 -180417619 - MER90 LTR ERV1 0 614 5 811 165 256 6 chr5 19213361 19213525 -180416625 - MER7A DNA MER2_type -143 203 1 1106 187 74 37 chr5 19213531 19213830 -180416320 + L1MC5 LINE L1 7601 7910 -51 2180 95 39 0 chr5 19213832 19214117 -180416033 + AluSq SINE Alu 1 296 -17 23 0 0 0 chr5 19214127 19214150 -180416000 + AT_rich Low_complexity Low_complexity 1 23 0 267 305 153 3 chr5 19214460 19214639 -180415511 + MIR SINE MIR 4 262 0 2050 198 24 55 chr5 19214740 19215245 -180414905 - MER65B LTR ERV1 -42 489 1 2358 152 33 35 chr5 19215248 19215677 -180414473 - Tigger2a DNA MER2_type 0 434 7 306 309 72 15 chr5 19216277 19216470 -180413680 - MIR SINE MIR 0 208 5 257 128 21 0 chr5 19216542 19216589 -180413561 + GA-rich Low_complexity Low_complexity 5 52 0 25 95 0 0 chr5 19216657 19216731 -180413419 + AT_rich Low_complexity Low_complexity 1 74 0 2464 58 0 32 chr5 19216811 19217120 -180413030 - AluY SINE Alu -12 299 1 2930 76 98 5 chr5 19217307 19217717 -180412433 + LTR7 LTR ERV1 1 448 -2 17487 96 7 22 chr5 19217719 19220290 -180409860 + HERVH LTR ERV1 1 2532 -5181 1041 169 0 0 chr5 19220282 19220460 -180409690 + HERVH LTR ERV1 2810 2987 -4726 * 913 130 20 0 chr5 19220454 19220600 -180409550 + HERVH LTR ERV1 3140 3288 -4425 * 3400 113 4 8 chr5 19220592 19221095 -180409055 + HERVH LTR ERV1 3492 3992 -3721 4520 135 0 1 chr5 19221098 19221758 -180408392 + HERVH LTR ERV1 4488 5146 -2567 1349 126 17 42 chr5 19221741 19221979 -180408171 + HERVH LTR ERV1 5588 5819 -1894 * 2396 94 53 13 chr5 19221980 19222354 -180407796 + HERVH LTR ERV1 7325 7713 0 3014 71 95 5 chr5 19222354 19222765 -180407385 + LTR7 LTR ERV1 1 448 -2 680 245 37 0 chr5 19223599 19223762 -180406388 - MIR SINE MIR -38 224 56 639 189 79 31 chr5 19224627 19224754 -180405396 + FLAM_A SINE Alu 1 133 0 252 0 0 0 chr5 19225475 19225503 -180404647 + (CCCCAG)n Simple_repeat Simple_repeat 4 31 0 250 325 0 0 chr5 19225596 19225676 -180404474 - MIR SINE MIR -19 243 164 180 338 88 0 chr5 19225684 19225764 -180404386 + MIR SINE MIR 17 103 -159 875 265 111 21 chr5 19226038 19226363 -180403787 + L1MC5 LINE L1 5537 5890 -1918 23 54 0 0 chr5 19226625 19226662 -180403488 + AT_rich Low_complexity Low_complexity 1 37 0 1541 171 30 23 chr5 19226672 19226971 -180403179 + AluJb SINE Alu 1 301 -11 1960 108 90 4 chr5 19226977 19227254 -180402896 + AluSx SINE Alu 1 301 -11 2124 172 6 6 chr5 19227584 19227945 -180402205 + MLT2D LTR ERVL 1 361 -53 294 148 0 0 chr5 19227946 19228000 -180402150 + (GA)n Simple_repeat Simple_repeat 2 55 0 266 93 70 0 chr5 19228000 19228043 -180402107 + MLT2D LTR ERVL 419 464 0 252 351 92 30 chr5 19228131 19228262 -180401888 + L2 LINE L2 3128 3266 -6 207 361 37 9 chr5 19229564 19229672 -180400478 - MIR SINE MIR -149 113 3 251 232 101 0 chr5 19229673 19229742 -180400408 + L1ME LINE L1 5597 5672 -449 * 1435 209 84 134 chr5 19229735 19230788 -180399362 + L1MC5 LINE L1 6778 7765 -196 390 57 0 0 chr5 19230788 19230841 -180399309 + (TG)n Simple_repeat Simple_repeat 1 53 0 1435 209 84 134 chr5 19230841 19230995 -180399155 + L1MC5 LINE L1 7765 7925 -36 719 282 41 15 chr5 19231951 19232217 -180397933 - LTR16A LTR ERVL -5 445 173 372 267 80 17 chr5 19232783 19232959 -180397191 - HERV16 LTR ERVL -793 4971 4785 1875 112 19 0 chr5 19232972 19233240 -180396910 - AluSx SINE Alu -39 273 1 4537 118 103 78 chr5 19233335 19234773 -180395377 + pTR5 LTR ERV1 66 2438 0 870 356 6 6 chr5 19234847 19235190 -180394960 - HERV16 LTR ERVL -1114 4540 4198 1447 305 73 22 chr5 19235198 19235896 -180394254 - HERV16 LTR ERVL -2716 2280 1705 458 324 19 24 chr5 19235913 19236126 -180394024 - HERV16 LTR ERVL -3429 1567 1356 517 312 13 0 chr5 19236169 19236326 -180393824 - HERV16 LTR ERVL -3653 1343 1185 695 130 0 43 chr5 19236326 19236441 -180393709 - Tigger7 DNA MER2_type 0 2491 2382 * 3331 155 55 0 chr5 19236435 19236976 -180393174 - Tigger7 DNA MER2_type -162 571 1 1936 148 63 27 chr5 19236978 19237310 -180392840 + MER2 DNA MER2_type 1 344 0 2684 276 83 38 chr5 19237311 19237699 -180392451 - HERV16 LTR ERVL -3811 1185 816 1167 230 5 0 chr5 19237699 19237916 -180392234 - MER58A DNA MER1_type -4 220 3 2684 276 83 38 chr5 19237916 19238659 -180391491 - HERV16 LTR ERVL -4180 816 3 774 272 134 55 chr5 19238675 19239079 -180391071 - LTR16A LTR ERVL -14 436 1 374 212 10 0 chr5 19239322 19239421 -180390729 + GA-rich Low_complexity Low_complexity 4 103 0 387 0 0 0 chr5 19240239 19240282 -180389868 + (CA)n Simple_repeat Simple_repeat 2 44 0 644 272 136 17 chr5 19240542 19240843 -180389307 + MER46C DNA MER2_type 2 338 0 264 267 147 42 chr5 19240955 19241146 -180389004 - MIR SINE MIR -32 230 20 2162 214 25 23 chr5 19241261 19241776 -180388374 + Charlie1b DNA MER1_type 7 522 -1 742 270 109 0 chr5 19241776 19241987 -180388163 + MIR SINE MIR 8 241 -21 451 146 109 88 chr5 19242898 19243035 -180387115 + MIR SINE MIR 79 218 -44 805 246 218 36 chr5 19243121 19243620 -180386530 - MLT1G LTR MaLR 0 590 1 1952 120 39 0 chr5 19243786 19244069 -180386081 + AluSx SINE Alu 1 294 -18 358 266 16 14 chr5 19244447 19244584 -180385566 - MLT1J LTR MaLR -291 194 21 23 33 0 0 chr5 19244600 19244630 -180385520 + AT_rich Low_complexity Low_complexity 1 30 0 2111 104 0 0 chr5 19245194 19245462 -180384688 + AluSx SINE Alu 35 302 -10 253 197 171 13 chr5 19245497 19245573 -180384577 + MIR SINE MIR 82 169 -93 2468 75 0 0 chr5 19245872 19246177 -180383973 - AluY SINE Alu -6 305 1 478 90 0 0 chr5 19246342 19246409 -180383741 + L1MA1 LINE L1 6232 6298 -4 1769 168 3 10 chr5 19247056 19247354 -180382796 + AluJo SINE Alu 1 296 -16 234 253 259 46 chr5 19248092 19248266 -180381884 - MIR SINE MIR -18 244 34 362 226 156 52 chr5 19249803 19250015 -180380135 - MIR SINE MIR -28 234 1 245 100 20 0 chr5 19250855 19250905 -180379245 + (TA)n Simple_repeat Simple_repeat 2 52 0 1353 152 43 5 chr5 19251012 19251223 -180378927 + MER20 DNA MER1_type 1 219 0 2533 65 0 3 chr5 19251508 19251816 -180378334 + AluY SINE Alu 1 307 -4 833 224 36 18 chr5 19251954 19252173 -180377977 + MER58A DNA MER1_type 2 224 0 197 263 26 118 chr5 19252245 19252321 -180377829 + MER5A DNA MER1_type 1 69 -120 905 153 71 53 chr5 19253398 19253568 -180376582 - AluJb SINE Alu -7 305 133 257 222 181 0 chr5 19255057 19255129 -180375021 + MIR SINE MIR 63 147 -115 700 192 46 91 chr5 19256255 19256474 -180373676 + MER3 DNA MER1_type 1 209 0 2032 249 107 29 chr5 19256566 19257302 -180372848 + L1ME3A LINE L1 5288 6123 -47 1809 148 80 19 chr5 19257302 19257626 -180372524 + MER2 DNA MER2_type 1 344 0 2032 249 107 29 chr5 19257626 19257673 -180372477 + L1ME3A LINE L1 6123 6165 -5 279 233 41 41 chr5 19257740 19257813 -180372337 + MIR SINE MIR 184 256 -6 721 212 0 29 chr5 19257871 19258008 -180372142 - FLAM_A SINE Alu 0 133 1 2174 271 117 16 chr5 19258241 19259228 -180370922 - L2 LINE L2 -106 3207 2119 1627 183 39 3 chr5 19259685 19259970 -180370180 + AluJb SINE Alu 1 295 -17 1619 188 58 50 chr5 19261449 19261810 -180368340 + MLT1A1 LTR MaLR 2 365 0 269 245 53 21 chr5 19262090 19262184 -180367966 - L2 LINE L2 -4 3309 3213 933 215 88 8 chr5 19263671 19263922 -180366228 - MER33 DNA MER1_type -13 311 41 2277 84 0 7 chr5 19263977 19264276 -180365874 + AluSx SINE Alu 1 297 -15 305 300 114 64 chr5 19264416 19264760 -180365390 + L2 LINE L2 2736 3102 -211 1471 215 217 25 chr5 19264770 19265207 -180364943 - MLT1F LTR MaLR 0 542 22 435 228 0 0 chr5 19265264 19265343 -180364807 - MER81 DNA DNA -34 80 2 279 224 214 10 chr5 19265367 19265465 -180364685 + L2 LINE L2 3192 3309 -4 207 0 0 0 chr5 19266146 19266169 -180363981 + (T)n Simple_repeat Simple_repeat 1 23 0 2387 142 83 0 chr5 19266813 19267208 -180362942 + MSTA LTR MaLR 1 428 0 257 251 133 94 chr5 19267931 19268082 -180362068 + MIR SINE MIR 3 160 -48 1715 199 53 3 chr5 19268103 19268425 -180361725 - MER58B DNA MER1_type 0 341 4 395 328 23 0 chr5 19268430 19268561 -180361589 - MIR SINE MIR -66 196 63 216 135 0 0 chr5 19271960 19271997 -180358153 + (T)n Simple_repeat Simple_repeat 1 37 0 383 331 55 44 chr5 19273398 19273579 -180356571 - MIR3 SINE MIR -23 185 3 3127 66 37 12 chr5 19273820 19274227 -180355923 + L1PA11 LINE L1 5758 6174 0 2141 174 63 10 chr5 19274493 19274908 -180355242 - L1MB7 LINE L1 0 6184 5748 1093 161 22 0 chr5 19275602 19275782 -180354368 + MER5A DNA MER1_type 2 185 -4 288 264 208 0 chr5 19276726 19276851 -180353299 + MIR SINE MIR 80 230 -32 563 271 0 12 chr5 19277255 19277280 -180352870 - L1MA10 LINE L1 -3 6331 6307 2551 216 78 45 chr5 19277280 19277984 -180352166 - L1ME1 LINE L1 -19 6147 5421 348 352 164 30 chr5 19280837 19281240 -180348910 - L2 LINE L2 -9 3263 2807 280 208 59 79 chr5 19281678 19281779 -180348371 - L2 LINE L2 0 3313 3215 22 0 0 0 chr5 19281991 19282013 -180348137 + AT_rich Low_complexity Low_complexity 1 22 0 559 123 0 0 chr5 19282691 19282764 -180347386 - AluJ/FLAM SINE Alu -233 79 7 279 312 172 19 chr5 19283777 19283934 -180346216 - MIR3 SINE MIR -5 203 23 333 239 84 35 chr5 19285282 19285424 -180344726 - MER5A DNA MER1_type -40 149 1 2210 220 70 42 chr5 19285482 19286104 -180344046 + L1MEc LINE L1 35 679 -5717 2391 91 0 3 chr5 19286104 19286413 -180343737 + AluSc SINE Alu 1 308 -1 2210 220 70 42 chr5 19286413 19286457 -180343693 + L1MEc LINE L1 679 720 -5676 23 0 0 0 chr5 19287272 19287295 -180342855 + AT_rich Low_complexity Low_complexity 1 23 0 420 251 0 26 chr5 19287880 19288001 -180342149 - MIR SINE MIR -69 193 77 227 286 0 0 chr5 19288373 19288422 -180341728 - L2 LINE L2 -14 3258 3210 201 304 179 0 chr5 19288643 19288755 -180341395 + L2 LINE L2 3178 3309 -4 826 182 0 0 chr5 19289038 19289170 -180340980 + FLAM_C SINE Alu 1 132 -1 333 0 0 0 chr5 19289496 19289533 -180340617 + (TC)n Simple_repeat Simple_repeat 1 37 0 189 0 0 0 chr5 19289532 19289553 -180340597 + (CA)n Simple_repeat Simple_repeat 1 21 0 * 21 0 0 0 chr5 19291542 19291563 -180338587 + AT_rich Low_complexity Low_complexity 1 21 0 2909 103 31 10 chr5 19291643 19292060 -180338090 + MSTA LTR MaLR 1 426 -2 4951 161 41 11 chr5 19292062 19292923 -180337227 + MSTA-int LTR MaLR 1 887 -764 1575 74 0 0 chr5 19292923 19293113 -180337037 + AluY SINE Alu 104 293 -18 1235 273 84 18 chr5 19293536 19293975 -180336175 - MLT1J LTR MaLR -43 468 1 806 196 116 6 chr5 19294118 19294291 -180335859 - MER58A DNA MER1_type -23 201 10 445 254 95 0 chr5 19294403 19294529 -180335621 - MIR SINE MIR -12 250 113 290 221 90 41 chr5 19295023 19295145 -180335005 - MER117 DNA MER1_type -51 146 19 4257 119 53 25 chr5 19295446 19295731 -180334419 - Tigger3(Golem) DNA MER2_type 0 3029 2754 2089 132 3 0 chr5 19295731 19296027 -180334123 + AluJb SINE Alu 1 297 -15 4257 119 53 25 chr5 19296027 19296471 -180333679 - Tigger3(Golem) DNA MER2_type -275 2754 2279 467 202 149 0 chr5 19296463 19296557 -180333593 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 724 260 20 59 chr5 19298416 19298670 -180331480 - MIR SINE MIR -5 257 14 2050 133 0 7 chr5 19298822 19299145 -180331005 - AluSx SINE Alu 0 321 1 24 32 0 0 chr5 19299223 19299254 -180330896 + AT_rich Low_complexity Low_complexity 1 31 0 2488 64 0 7 chr5 19299260 19299558 -180330592 - AluY SINE Alu -15 296 1 460 250 72 7 chr5 19299588 19299740 -180330410 + MLT1H1 LTR MaLR 2 163 -392 233 248 138 18 chr5 19299764 19299873 -180330277 + L1ME LINE L1 5785 5906 -215 2298 88 16 7 chr5 19300688 19300993 -180329157 + AluSg1 SINE Alu 1 308 -1 2933 80 8 0 chr5 19301195 19301558 -180328592 - L1PA10 LINE L1 -4 6164 5799 253 357 0 0 chr5 19301918 19302016 -180328134 - MIR SINE MIR -1 261 164 180 338 88 0 chr5 19302024 19302104 -180328046 + MIR SINE MIR 17 103 -159 866 268 111 21 chr5 19302378 19302703 -180327447 + L1MC4a LINE L1 5537 5890 -1918 23 54 0 0 chr5 19302965 19303002 -180327148 + AT_rich Low_complexity Low_complexity 1 37 0 888 172 30 86 chr5 19303012 19303280 -180326870 + AluJo SINE Alu 1 253 -59 180 0 0 0 chr5 19303321 19303341 -180326809 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 194 234 181 21 chr5 19304909 19305003 -180325147 + L2 LINE L2 3136 3244 -28 817 149 32 4 chr5 19305952 19306174 -180323976 - AluJb SINE Alu -1 311 2 1832 144 9 41 chr5 19309206 19309526 -180320624 + AluJb SINE Alu 2 311 -1 2220 114 0 40 chr5 19309998 19310323 -180319827 + AluSx SINE Alu 1 312 0 2457 204 2 2 chr5 19310596 19311012 -180319138 + MER47B DNA MER2_type 1 416 -2 1880 143 199 6 chr5 19311123 19311480 -180318670 - MSTB LTR MaLR 0 426 1 367 240 31 21 chr5 19312254 19312350 -180317800 + MLT1J LTR MaLR 82 178 -333 1056 212 25 17 chr5 19312366 19312607 -180317543 + MER57-int LTR ERV1 4 246 -7291 572 163 54 16 chr5 19313251 19313380 -180316770 + MER57-int LTR ERV1 302 435 -4501 2951 87 3 0 chr5 19314027 19314396 -180315754 - L1PB1 LINE L1 0 6151 5782 300 97 48 0 chr5 19314396 19314458 -180315692 + (TA)n Simple_repeat Simple_repeat 2 66 0 2085 81 0 0 chr5 19314460 19314731 -180315419 - L1PB1 LINE L1 -360 5791 5521 438 304 22 27 chr5 19315892 19316076 -180314074 + MER5A DNA MER1_type 1 183 -6 804 191 0 7 chr5 19316312 19316453 -180313697 + FLAM_C SINE Alu 2 141 -2 186 266 138 75 chr5 19316811 19316905 -180313245 + L2 LINE L2 3127 3226 -46 274 217 89 72 chr5 19317175 19317355 -180312795 - Charlie7 DNA MER1_type -9 2603 2421 279 240 146 0 chr5 19317355 19317451 -180312699 + L1MC/D LINE L1 5714 5823 -1985 330 189 25 8 chr5 19317541 19317788 -180312362 + (TA)n Simple_repeat Simple_repeat 1 251 0 275 250 62 0 chr5 19317818 19317914 -180312236 + GA-rich Low_complexity Low_complexity 3 104 0 180 264 0 57 chr5 19318213 19318266 -180311884 - L2 LINE L2 -80 3192 3143 2217 99 0 3 chr5 19319799 19320121 -180310029 - AluSg SINE Alu 0 310 1 245 130 0 0 chr5 19320158 19320204 -180309946 - MADE1 DNA Mariner 0 80 35 25 0 0 0 chr5 19320204 19320229 -180309921 + AT_rich Low_complexity Low_complexity 1 25 0 1707 191 33 3 chr5 19322215 19322518 -180307632 + AluJo SINE Alu 1 312 0 204 200 0 0 chr5 19322518 19322563 -180307587 + GA-rich Low_complexity Low_complexity 2 46 0 1596 233 76 42 chr5 19322565 19323115 -180307035 - L1MD3 LINE L1 -23 7972 7404 348 204 0 139 chr5 19323115 19323223 -180306927 - MLT1F1 LTR MaLR -442 125 33 362 187 73 107 chr5 19323242 19323392 -180306758 - L1MD3 LINE L1 -903 7092 6948 322 247 138 122 chr5 19324358 19324893 -180305257 - L1M2 LINE L1 -5452 1397 773 1758 187 42 79 chr5 19325254 19325682 -180304468 - MLT2D LTR ERVL -2 412 1 193 200 17 33 chr5 19326194 19326254 -180303896 - MIR SINE MIR -26 236 178 947 291 140 6 chr5 19326356 19326720 -180303430 + LTR16A LTR ERVL 26 438 -12 416 223 11 0 chr5 19326742 19326836 -180303314 - MIR SINE MIR -156 106 12 2564 68 0 0 chr5 19327346 19327654 -180302496 - AluY SINE Alu -3 308 1 618 254 14 0 chr5 19328305 19328447 -180301703 - MER58B DNA MER1_type 0 341 198 21 36 0 0 chr5 19328789 19328817 -180301333 + AT_rich Low_complexity Low_complexity 1 28 0 338 191 169 0 chr5 19329600 19329689 -180300461 + LTR16A LTR ERVL 342 445 -5 681 223 32 27 chr5 19329847 19330035 -180300115 + MIR SINE MIR 27 215 -47 2111 102 39 0 chr5 19330136 19330420 -180299730 + AluSx SINE Alu 1 295 -17 210 222 16 32 chr5 19330511 19330574 -180299576 + GA-rich Low_complexity Low_complexity 3 64 0 341 268 134 30 chr5 19330666 19330830 -180299320 - MIR SINE MIR -22 240 60 193 330 128 34 chr5 19330926 19331105 -180299045 - L2 LINE L2 -4 3268 3073 2042 87 0 4 chr5 19331789 19332043 -180298107 + AluSg SINE Alu 1 253 -57 2483 48 10 0 chr5 19332596 19332887 -180297263 - AluY SINE Alu -17 294 1 773 300 185 13 chr5 19333195 19333649 -180296501 - LTR67 LTR ERVL -10 547 16 528 168 72 32 chr5 19333712 19333837 -180296313 + FLAM_C SINE Alu 1 130 -3 414 285 31 15 chr5 19334422 19334552 -180295598 - L2 LINE L2 0 3272 3141 183 343 85 20 chr5 19336671 19336872 -180293278 - MIR SINE MIR -20 242 29 1435 127 5 0 chr5 19337044 19337241 -180292909 + AluSg/x SINE Alu 85 282 -30 297 243 135 9 chr5 19337497 19337608 -180292542 - MIR3 SINE MIR -1 207 83 346 309 8 0 chr5 19337988 19338111 -180292039 - MIR SINE MIR -29 233 110 2310 67 0 7 chr5 19338238 19338522 -180291628 - AluY SINE Alu -2 309 28 820 187 19 16 chr5 19340646 19340892 -180289258 + MLT1A1 LTR MaLR 1 365 0 2155 125 3 0 chr5 19340958 19341262 -180288888 + AluSg SINE Alu 6 310 0 628 43 22 11 chr5 19341274 19341366 -180288784 + (GGAA)n Simple_repeat Simple_repeat 2 94 0 293 310 23 0 chr5 19341566 19341625 -180288525 - L1MA10 LINE L1 -7 6327 6269 356 238 50 44 chr5 19341625 19341785 -180288365 - L1ME2 LINE L1 -57 6107 5947 3116 205 72 38 chr5 19342377 19342938 -180287212 - L1ME1 LINE L1 -5 6161 5621 2276 107 0 0 chr5 19342938 19343236 -180286914 + AluSx SINE Alu 1 298 -14 3116 205 72 38 chr5 19343236 19343515 -180286635 - L1ME1 LINE L1 -545 5621 5353 2321 108 0 0 chr5 19343515 19343820 -180286330 - AluSq SINE Alu -8 305 1 3116 205 72 38 chr5 19343820 19344362 -180285788 - L1ME1 LINE L1 -813 5353 4739 433 256 33 0 chr5 19344973 19345094 -180285056 + MIR SINE MIR 117 241 -21 198 0 0 0 chr5 19345120 19345142 -180285008 + (CAG)n Simple_repeat Simple_repeat 2 23 0 1710 185 3 3 chr5 19345709 19346012 -180284138 - AluJo SINE Alu -9 303 1 279 223 202 0 chr5 19348008 19348102 -180282048 + MLT1I LTR MaLR 281 393 -16 574 152 43 0 chr5 19348378 19348470 -180281680 + MLT1A2 LTR MaLR 277 372 -2 22 0 0 0 chr5 19349810 19349832 -180280318 + AT_rich Low_complexity Low_complexity 1 22 0 2015 178 123 5 chr5 19350234 19350650 -180279500 + L1MB5 LINE L1 5710 6174 0 1567 189 173 16 chr5 19351263 19351697 -180278453 - MLT1D LTR MaLR -3 502 1 435 272 34 28 chr5 19352732 19352945 -180277205 + L1ME4a LINE L1 5734 5949 -213 289 248 15 22 chr5 19352955 19353092 -180277058 + (TA)n Simple_repeat Simple_repeat 2 137 0 302 225 50 0 chr5 19354244 19354324 -180275826 - L1ME2 LINE L1 -246 5875 5792 483 298 93 54 chr5 19354400 19354699 -180275451 + L2 LINE L2 2912 3231 -82 2044 138 3 3 chr5 19354699 19354996 -180275154 - AluSx SINE Alu -15 297 1 483 298 93 54 chr5 19354996 19355082 -180275068 + L2 LINE L2 3231 3312 -1 354 243 46 33 chr5 19355111 19355263 -180274887 + L1ME4a LINE L1 5967 6120 -1 21 36 0 0 chr5 19355441 19355469 -180274681 + AT_rich Low_complexity Low_complexity 1 28 0 2390 60 10 17 chr5 19355698 19355998 -180274152 - AluY SINE Alu -7 304 7 21 36 0 0 chr5 19356110 19356138 -180274012 + AT_rich Low_complexity Low_complexity 1 28 0 2228 108 0 0 chr5 19356379 19356674 -180273476 - AluSx SINE Alu -17 295 1 693 201 136 0 chr5 19357396 19357565 -180272585 + MSTD LTR MaLR 1 192 -204 301 241 0 0 chr5 19357565 19357648 -180272502 + A-rich Low_complexity Low_complexity 1 83 0 1010 188 0 11 chr5 19357657 19357833 -180272317 + FRAM SINE Alu 1 173 -3 1104 195 39 0 chr5 19357833 19358038 -180272112 + MSTD LTR MaLR 184 396 0 2429 70 0 0 chr5 19360761 19361096 -180269054 + AluY SINE Alu 2 336 0 2421 88 3 3 chr5 19361578 19361886 -180268264 + AluSp SINE Alu 2 309 -4 2385 153 102 40 chr5 19362106 19362624 -180267526 + L1MC3 LINE L1 7218 7767 -18 1826 168 0 7 chr5 19362800 19363104 -180267046 - AluJo SINE Alu -10 302 1 261 312 73 46 chr5 19365509 19365727 -180264423 - L2 LINE L2 -4 3268 3045 206 206 0 0 chr5 19365912 19365946 -180264204 + (CA)n Simple_repeat Simple_repeat 2 35 0 1860 169 3 13 chr5 19367218 19367532 -180262618 + AluJo SINE Alu 1 311 -1 2278 103 0 17 chr5 19367818 19368120 -180262030 - AluSx SINE Alu -15 297 1 904 157 35 50 chr5 19368179 19368377 -180261773 + L1MB1 LINE L1 5942 6136 -32 210 71 0 0 chr5 19368824 19368852 -180261298 + (T)n Simple_repeat Simple_repeat 1 28 0 1582 251 75 19 chr5 19369209 19369687 -180260463 + MLT1D LTR MaLR 1 505 0 22 80 0 0 chr5 19371091 19371141 -180259009 + AT_rich Low_complexity Low_complexity 1 50 0 2277 107 0 0 chr5 19371758 19372056 -180258094 - AluSx SINE Alu -13 299 2 2533 75 3 0 chr5 19372447 19372754 -180257396 + AluSc SINE Alu 1 308 -1 2328 111 0 6 chr5 19373278 19373593 -180256557 - AluSq SINE Alu 0 313 1 208 134 15 149 chr5 19374202 19374269 -180255881 + MER5A DNA MER1_type 47 104 -85 237 204 20 0 chr5 19374291 19374340 -180255810 - L2 LINE L2 -7 3306 3257 393 296 75 0 chr5 19374684 19374843 -180255307 + MER112 DNA MER1_type 74 244 -16 814 225 86 72 chr5 19375633 19375828 -180254322 - L1MC5 LINE L1 -51 7910 7719 2305 93 0 43 chr5 19375828 19376016 -180254134 - AluSc SINE Alu 0 309 114 197 33 33 0 chr5 19376016 19376046 -180254104 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2359 60 14 0 chr5 19376046 19376328 -180253822 - AluSp SINE Alu -27 286 1 2305 93 0 43 chr5 19376328 19376461 -180253689 - AluSc SINE Alu -193 116 1 814 225 86 72 chr5 19376461 19376580 -180253570 - L1MC5 LINE L1 -242 7719 7603 213 39 0 0 chr5 19376580 19376606 -180253544 + (CA)n Simple_repeat Simple_repeat 1 26 0 814 225 86 72 chr5 19376606 19377189 -180252961 - L1MC5 LINE L1 -358 7603 6985 2261 127 30 25 chr5 19377189 19377550 -180252600 + THE1B LTR MaLR 1 363 -1 814 225 86 72 chr5 19377550 19377699 -180252451 - L1MC5 LINE L1 -976 6985 6840 484 236 139 6 chr5 19378112 19378277 -180251873 - L3 LINE CR1 -7 1570 1384 469 309 115 20 chr5 19378318 19378613 -180251537 - L2 LINE L2 -37 3235 2913 643 240 110 0 chr5 19378735 19378935 -180251215 - MIR SINE MIR -37 225 4 2827 143 22 0 chr5 19379055 19379509 -180250641 - L1MC2 LINE L1 -234 6110 5647 276 293 219 30 chr5 19379525 19379948 -180250202 - L3 LINE CR1 -608 969 423 1484 245 59 64 chr5 19380405 19380981 -180249169 - MER45C DNA AcHobo -378 575 3 400 18 35 0 chr5 19381068 19381125 -180249025 + (CA)n Simple_repeat Simple_repeat 2 60 0 180 0 0 0 chr5 19381382 19381402 -180248748 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 1087 40 0 0 chr5 19381403 19381527 -180248623 - L1PA10 LINE L1 -20 6148 6025 189 237 0 0 chr5 19381836 19381874 -180248276 - L3 LINE CR1 -615 962 925 23 33 0 0 chr5 19382192 19382222 -180247928 + AT_rich Low_complexity Low_complexity 1 30 0 1565 150 0 41 chr5 19382747 19383041 -180247109 + AluSx SINE Alu 3 284 -28 24 67 0 0 chr5 19383041 19383086 -180247064 + AT_rich Low_complexity Low_complexity 1 45 0 2533 76 15 6 chr5 19383502 19383843 -180246307 + L1PB1 LINE L1 5807 6150 -1 210 281 62 0 chr5 19383861 19383925 -180246225 - MIR3 SINE MIR -1 207 140 23 68 0 0 chr5 19383939 19383983 -180246167 + AT_rich Low_complexity Low_complexity 1 44 0 279 237 52 10 chr5 19384279 19384376 -180245774 - MER104 DNA Tc2 -45 135 35 2280 161 59 5 chr5 19385160 19385565 -180244585 - MSTA LTR MaLR -1 427 1 275 322 23 11 chr5 19386042 19386129 -180244021 + MER5A DNA MER1_type 56 143 -46 191 286 0 18 chr5 19386147 19386203 -180243947 + MIR3 SINE MIR 151 205 -3 2000 158 33 19 chr5 19386296 19386656 -180243494 - MLT1A1 LTR MaLR 0 365 1 1948 191 31 13 chr5 19387661 19388044 -180242106 - MLT1B LTR MaLR 0 390 1 1768 116 54 4 chr5 19388912 19389215 -180240935 - AluSx SINE Alu 0 312 1 257 257 27 27 chr5 19390214 19390288 -180239862 - MIR SINE MIR -112 150 77 602 202 6 0 chr5 19390328 19390506 -180239644 + (CA)n Simple_repeat Simple_repeat 2 180 0 5194 132 11 5 chr5 19391765 19392570 -180237580 + L1PA14 LINE L1 5311 6120 -41 374 266 32 24 chr5 19392854 19392978 -180237172 + L2 LINE L2 3136 3260 -12 1937 122 17 3 chr5 19393993 19394287 -180235863 + AluSx SINE Alu 5 302 -10 262 229 0 0 chr5 19395624 19395672 -180234478 + MIR3 SINE MIR 112 159 -49 448 280 70 42 chr5 19396656 19396905 -180233245 + MIR SINE MIR 3 256 -6 557 271 133 57 chr5 19397572 19397992 -180232158 + L2 LINE L2 2816 3267 -5 208 272 97 29 chr5 19398022 19398125 -180232025 + L2 LINE L2 2925 3034 -238 1309 174 15 104 chr5 19398443 19398770 -180231380 + AluJb SINE Alu 1 298 -4 231 291 181 16 chr5 19399134 19399261 -180230889 - L2 LINE L2 -1 3271 3124 1901 282 133 40 chr5 19399261 19399583 -180230567 + HAL1 LINE L1 16 307 -2200 1966 98 0 0 chr5 19399583 19399848 -180230302 - AluSx SINE Alu -47 265 1 1901 282 133 40 chr5 19399848 19400632 -180229518 + HAL1 LINE L1 307 1017 -1490 1346 185 86 20 chr5 19400632 19400924 -180229226 + AluJo SINE Alu 1 311 -1 1901 282 133 40 chr5 19400924 19400937 -180229213 + HAL1 LINE L1 1017 1027 -1480 2322 97 3 0 chr5 19400937 19401246 -180228904 - AluSx SINE Alu -2 310 1 1901 282 133 40 chr5 19401246 19401754 -180228396 + HAL1 LINE L1 1027 1797 -710 427 213 184 7 chr5 19402060 19402201 -180227949 + HAL1 LINE L1 2057 2222 -285 2059 94 3 3 chr5 19402276 19402585 -180227565 + AluSp SINE Alu 1 309 0 326 257 122 8 chr5 19403776 19403924 -180226226 + MIR SINE MIR 29 192 -62 1356 193 8 89 chr5 19405159 19405553 -180224597 - MLT1A1 LTR MaLR -3 362 1 1434 291 36 16 chr5 19406486 19406926 -180223224 + L2 LINE L2 2852 3300 -13 1777 118 0 11 chr5 19406956 19407218 -180222932 + AluSx SINE Alu 45 303 -9 1176 133 6 0 chr5 19407587 19407767 -180222383 - AluSx SINE Alu -131 181 1 1883 126 3 7 chr5 19408004 19408290 -180221860 + AluSx SINE Alu 1 285 -27 318 272 22 22 chr5 19408292 19408384 -180221766 - L1MC4 LINE L1 -1338 6704 6613 183 204 0 0 chr5 19408385 19408429 -180221721 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 23 33 0 0 chr5 19408865 19408895 -180221255 + AT_rich Low_complexity Low_complexity 1 30 0 2856 91 3 0 chr5 19409027 19409390 -180220760 + THE1B LTR MaLR 1 364 0 1967 124 0 3 chr5 19409977 19410267 -180219883 + AluSg SINE Alu 1 289 -21 790 144 50 29 chr5 19410272 19410411 -180219739 + FLAM_C SINE Alu 2 143 0 27 29 0 0 chr5 19410791 19410825 -180219325 + AT_rich Low_complexity Low_complexity 1 34 0 2382 67 0 0 chr5 19410959 19411257 -180218893 - AluY SINE Alu -13 298 1 2103 100 4 0 chr5 19411321 19411602 -180218548 - AluSp SINE Alu -31 282 1 22 0 0 0 chr5 19411892 19411914 -180218236 + AT_rich Low_complexity Low_complexity 1 22 0 8453 32 10 0 chr5 19412730 19414502 -180215648 + L1PA4 LINE L1 4367 6137 -18 183 267 67 33 chr5 19414504 19414594 -180215556 + L2 LINE L2 3046 3138 -175 2179 103 0 3 chr5 19414659 19414971 -180215179 - AluY SINE Alu 0 311 1 261 177 108 54 chr5 19415128 19415258 -180214892 + MLT1F LTR MaLR 189 325 -217 480 367 92 28 chr5 19415353 19415498 -180214652 + L2 LINE L2 2287 2421 -851 1626 179 68 70 chr5 19415498 19415864 -180214286 + MLT2D LTR ERVL 2 368 -46 402 21 0 0 chr5 19415864 19415911 -180214239 + (CA)n Simple_repeat Simple_repeat 1 47 0 1626 179 68 70 chr5 19415911 19415958 -180214192 + MLT2D LTR ERVL 368 414 0 480 367 92 28 chr5 19415958 19416723 -180213427 + L2 LINE L2 2421 3258 -14 1319 107 0 5 chr5 19416847 19417034 -180213116 + AluSx SINE Alu 1 186 -126 357 197 0 0 chr5 19417112 19417178 -180212972 + AluS SINE Alu 230 295 -7 982 311 119 35 chr5 19417451 19417579 -180212571 - L1MC4 LINE L1 -1 8041 7925 423 0 0 0 chr5 19417579 19417626 -180212524 + (CA)n Simple_repeat Simple_repeat 2 48 0 982 311 119 35 chr5 19417626 19417957 -180212193 - L1MC4 LINE L1 -117 7925 7623 1822 129 61 0 chr5 19417957 19418237 -180211913 + AluSx SINE Alu 1 297 -15 1869 140 3 3 chr5 19418237 19418536 -180211614 + AluSq SINE Alu 1 300 -13 982 311 119 35 chr5 19418536 19418936 -180211214 - L1MC4 LINE L1 -418 7624 7107 1384 158 0 0 chr5 19418941 19419156 -180210994 - AluJb SINE Alu -15 297 83 1021 242 125 45 chr5 19419173 19419622 -180210528 - L1MC4 LINE L1 -884 6924 6505 221 327 87 10 chr5 19420299 19420403 -180209747 - MIR SINE MIR -76 186 75 293 233 0 33 chr5 19420417 19420507 -180209643 - HsTC2 DNA Tc2 -1811 87 1 479 236 9 9 chr5 19421096 19421202 -180208948 + MER94 DNA DNA 9 114 -20 1790 194 23 127 chr5 19421942 19422549 -180207601 + MER21B LTR ERV1 1 544 -319 1531 184 4 0 chr5 19422552 19422830 -180207320 + AluJo SINE Alu 1 279 -33 525 131 0 0 chr5 19422830 19422914 -180207236 + (TG)n Simple_repeat Simple_repeat 2 85 0 913 257 75 12 chr5 19422926 19423179 -180206971 + MER21B LTR ERV1 538 806 -57 2348 183 16 56 chr5 19423200 19423249 -180206901 - LTR54 LTR ERV1 0 510 461 2427 60 0 10 chr5 19423249 19423563 -180206587 + AluY SINE Alu 1 311 0 2348 183 16 56 chr5 19423563 19424027 -180206123 - LTR54 LTR ERV1 -49 461 18 746 100 0 0 chr5 19424027 19424127 -180206023 + HY1 scRNA scRNA 1 100 -12 1498 129 121 4 chr5 19424160 19424424 -180205726 - AluJb SINE Alu -17 295 1 275 331 106 7 chr5 19425229 19425371 -180204779 + L2 LINE L2 2264 2419 -895 191 242 0 65 chr5 19426256 19426318 -180203832 - L2 LINE L2 -7 3265 3208 2120 116 73 14 chr5 19426576 19426930 -180203220 - THE1C LTR MaLR 0 375 1 290 227 19 63 chr5 19428721 19428854 -180201296 - L1ME3A LINE L1 -4 6166 6038 385 183 14 35 chr5 19429327 19429469 -180200681 + GA-rich Low_complexity Low_complexity 1 139 0 21 0 0 0 chr5 19429937 19429958 -180200192 + GC_rich Low_complexity Low_complexity 1 21 0 243 250 11 22 chr5 19430055 19430147 -180200003 + C-rich Low_complexity Low_complexity 5 95 0 26 0 0 0 chr5 19430340 19430366 -180199784 + GC_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 19430531 19430552 -180199598 + GC_rich Low_complexity Low_complexity 1 21 0 2641 48 0 10 chr5 19431708 19432021 -180198129 - AluY SINE Alu -1 310 1 25 51 0 0 chr5 19432026 19432065 -180198085 + AT_rich Low_complexity Low_complexity 1 39 0 1384 249 63 34 chr5 19432297 19432856 -180197294 - L1MC4a LINE L1 -1980 5828 5254 402 257 88 41 chr5 19434053 19434224 -180195926 + L1ME4a LINE L1 5743 5921 -249 29 0 0 0 chr5 19434598 19434627 -180195523 + AT_rich Low_complexity Low_complexity 1 29 0 1193 245 57 49 chr5 19434829 19435059 -180195091 - L1ME2 LINE L1 -29 6135 5908 2051 98 0 0 chr5 19435059 19435323 -180194827 - AluSx SINE Alu -14 298 35 1193 245 57 49 chr5 19435323 19435562 -180194588 - L1ME2 LINE L1 -256 5908 5662 7246 44 0 5 chr5 19435731 19436689 -180193461 - L1PA5 LINE L1 -2 6152 5185 629 206 50 22 chr5 19437048 19437228 -180192922 + MER5A DNA MER1_type 4 188 -1 290 240 60 30 chr5 19437826 19437926 -180192224 - MIR SINE MIR -56 206 104 573 260 105 0 chr5 19437950 19438131 -180192019 + MER3 DNA MER1_type 1 200 -9 1993 126 20 3 chr5 19438958 19439260 -180190890 + AluSx SINE Alu 1 307 -5 219 36 0 0 chr5 19439266 19439294 -180190856 + (GGGGA)n Simple_repeat Simple_repeat 4 31 0 210 247 0 0 chr5 19439340 19439417 -180190733 + A-rich Low_complexity Low_complexity 1 77 0 308 295 105 19 chr5 19439443 19439653 -180190497 + L1M4 LINE L1 3073 3300 -2846 230 143 20 0 chr5 19439667 19439716 -180190434 + GA-rich Low_complexity Low_complexity 3 52 0 264 217 62 108 chr5 19441061 19441105 -180189045 + L2 LINE L2 3190 3234 -79 1731 138 24 3 chr5 19441105 19441394 -180188756 - AluSx SINE Alu -16 296 2 264 217 62 108 chr5 19441394 19441478 -180188672 + L2 LINE L2 3234 3312 -1 270 255 54 34 chr5 19441506 19441655 -180188495 + L1ME4a LINE L1 5968 6119 -2 21532 45 12 5 chr5 19442147 19444824 -180185326 + L1P LINE L1 687 3384 -2762 1038 198 40 12 chr5 19444824 19445072 -180185078 - MER39 LTR ERV1 -60 647 393 3361 52 7 5 chr5 19445105 19445527 -180184623 + L1PA4 LINE L1 5715 6137 -18 2351 93 0 3 chr5 19445690 19446002 -180184148 - AluY SINE Alu 0 311 1 249 177 108 54 chr5 19446159 19446289 -180183861 + MLT1F LTR MaLR 189 325 -217 277 362 91 26 chr5 19446384 19446529 -180183621 + L2 LINE L2 2287 2421 -893 1624 181 68 70 chr5 19446529 19446895 -180183255 + MLT2D LTR ERVL 2 368 -46 315 0 0 0 chr5 19446895 19446930 -180183220 + (CA)n Simple_repeat Simple_repeat 1 35 0 1624 181 68 70 chr5 19446930 19446977 -180183173 + MLT2D LTR ERVL 368 414 0 277 362 91 26 chr5 19446977 19447472 -180182678 + L2 LINE L2 2421 2968 -346 183 319 28 14 chr5 19447670 19447742 -180182408 + L2 LINE L2 3186 3258 -14 2209 124 0 0 chr5 19447866 19448165 -180181985 + AluSx SINE Alu 1 299 -13 1796 296 124 40 chr5 19448437 19448569 -180181581 - L1MC4 LINE L1 0 8042 7923 477 0 0 0 chr5 19448569 19448622 -180181528 + (CA)n Simple_repeat Simple_repeat 2 54 0 1796 296 124 40 chr5 19448622 19448953 -180181197 - L1MC4 LINE L1 -119 7923 7621 1906 134 60 0 chr5 19448953 19449236 -180180914 + AluSx SINE Alu 1 300 -12 2035 139 0 3 chr5 19449236 19449536 -180180614 + AluSq SINE Alu 1 300 -13 1796 296 124 40 chr5 19449536 19449941 -180180209 - L1MC4 LINE L1 -421 7621 7252 1479 157 0 0 chr5 19449941 19450157 -180179993 - AluJb SINE Alu -14 298 83 1796 296 124 40 chr5 19450157 19450517 -180179633 - L1MC4 LINE L1 -790 7252 6707 303 233 0 33 chr5 19451415 19451505 -180178645 - HsTC2 DNA Tc2 -1811 87 1 477 236 9 9 chr5 19452094 19452200 -180177950 + MER94 DNA DNA 9 114 -20 1777 194 23 127 chr5 19452939 19453546 -180176604 + MER21B LTR ERV1 1 544 -319 1635 184 4 0 chr5 19453549 19453827 -180176323 + AluJo SINE Alu 1 279 -33 750 154 0 0 chr5 19453827 19453957 -180176193 + (TG)n Simple_repeat Simple_repeat 2 131 0 558 285 29 7 chr5 19453969 19454106 -180176044 + MER21B LTR ERV1 538 677 -186 2234 112 0 0 chr5 19454407 19454702 -180175448 - AluSx SINE Alu -16 296 2 2525 75 3 0 chr5 19455093 19455399 -180174751 + AluSc SINE Alu 1 307 -2 2364 105 0 6 chr5 19455924 19456237 -180173913 - AluSq SINE Alu -2 311 1 186 329 25 51 chr5 19456311 19456469 -180173681 - L2 LINE L2 -310 2962 2809 208 134 15 149 chr5 19456847 19456914 -180173236 + MER5A DNA MER1_type 47 104 -85 237 204 20 0 chr5 19456936 19456985 -180173165 - L2 LINE L2 -7 3306 3257 393 296 75 0 chr5 19457329 19457488 -180172662 + MER112 DNA MER1_type 74 244 -16 586 205 105 53 chr5 19458278 19458468 -180171682 - L1MC5 LINE L1 -51 7910 7711 2324 93 27 0 chr5 19458473 19458774 -180171376 - AluSc SINE Alu 0 309 1 936 202 62 5 chr5 19459080 19459288 -180170862 - MER58A DNA MER1_type -3 221 2 301 253 163 11 chr5 19460300 19460490 -180169660 + L2 LINE L2 2978 3196 -117 2349 109 0 0 chr5 19461283 19461585 -180168565 + AluSx SINE Alu 1 302 -10 2438 80 0 3 chr5 19463462 19463763 -180166387 + AluSq SINE Alu 1 300 -13 24 0 0 0 chr5 19463840 19463864 -180166286 + AT_rich Low_complexity Low_complexity 1 24 0 2012 164 0 0 chr5 19464732 19465036 -180165114 + AluSx SINE Alu 1 304 -8 2113 117 0 3 chr5 19465711 19466001 -180164149 + AluSg SINE Alu 1 289 -21 806 142 58 0 chr5 19466005 19466125 -180164025 + FLAM_C SINE Alu 1 127 -16 27 29 0 0 chr5 19466525 19466559 -180163591 + AT_rich Low_complexity Low_complexity 1 34 0 2513 67 0 0 chr5 19466693 19466991 -180163159 - AluY SINE Alu -13 298 1 1053 81 6 43 chr5 19467042 19467203 -180162947 - AluSq SINE Alu -19 294 140 227 127 0 73 chr5 19467327 19467382 -180162768 - Alu SINE Alu -248 52 2 402 257 88 41 chr5 19468115 19468286 -180161864 + L1ME3A LINE L1 5743 5921 -249 29 0 0 0 chr5 19468661 19468690 -180161460 + AT_rich Low_complexity Low_complexity 1 29 0 1193 245 57 49 chr5 19468892 19469122 -180161028 - L1ME2 LINE L1 -29 6135 5908 2059 98 0 0 chr5 19469122 19469387 -180160763 - AluSx SINE Alu -13 299 35 1193 245 57 49 chr5 19469387 19469626 -180160524 - L1ME2 LINE L1 -256 5908 5662 3219 52 24 9 chr5 19469794 19470216 -180159934 - L1PA5 LINE L1 -2 6152 5725 271 181 23 98 chr5 19470426 19470559 -180159591 + MER39 LTR ERV1 525 647 -60 27237 50 9 5 chr5 19470559 19473928 -180156222 - L1P LINE L1 -2762 3384 1 1817 167 24 3 chr5 19473982 19474275 -180155875 + AluJo SINE Alu 1 299 -13 322 298 181 23 chr5 19474664 19474963 -180155187 - L2 LINE L2 -1 3312 2967 2298 103 0 3 chr5 19474974 19475274 -180154876 - AluSx SINE Alu -13 299 1 7539 32 36 0 chr5 19475976 19477416 -180152734 - L1PA4 LINE L1 0 6155 4695 1052 140 59 16 chr5 19479076 19479262 -180150888 - AluSq SINE Alu 0 313 120 569 100 100 10 chr5 19479702 19479802 -180150348 - AluSq SINE Alu -170 143 35 2183 112 0 7 chr5 19480833 19481128 -180149022 + AluSg SINE Alu 2 294 -16 1522 185 82 4 chr5 19481731 19482012 -180148138 + AluJo SINE Alu 1 303 -9 702 248 82 19 chr5 19483982 19484188 -180145962 + MER20 DNA MER1_type 1 219 0 1874 107 11 0 chr5 19484629 19484901 -180145249 - L1PB1 LINE L1 -80 6071 5797 374 246 109 0 chr5 19485399 19485537 -180144613 + MIR SINE MIR 15 167 -95 1616 184 46 23 chr5 19486332 19486680 -180143470 - MLT1A1 LTR MaLR 0 365 10 2295 117 0 0 chr5 19486684 19486993 -180143157 + AluSx SINE Alu 1 309 -3 596 263 70 47 chr5 19487006 19487307 -180142843 + L1MC5 LINE L1 7610 7917 -44 1701 135 4 11 chr5 19487547 19487813 -180142337 + AluJb SINE Alu 17 280 -32 2340 98 0 0 chr5 19489598 19489894 -180140256 + AluSx SINE Alu 1 296 -16 24 67 0 0 chr5 19490689 19490734 -180139416 + AT_rich Low_complexity Low_complexity 1 45 0 2398 91 0 0 chr5 19491123 19491421 -180138729 + AluSg SINE Alu 2 299 -11 328 261 17 9 chr5 19491842 19491957 -180138193 + A-rich Low_complexity Low_complexity 1 116 0 2231 107 7 0 chr5 19491966 19492256 -180137894 + AluSg SINE Alu 1 292 -18 22 0 0 0 chr5 19492611 19492633 -180137517 + AT_rich Low_complexity Low_complexity 1 22 0 1660 173 37 0 chr5 19492635 19492948 -180137202 + AluJo SINE Alu 1 323 0 2515 57 0 0 chr5 19493170 19493469 -180136681 - AluY SINE Alu -12 299 1 215 188 0 14 chr5 19493557 19493626 -180136524 + GA-rich Low_complexity Low_complexity 1 68 0 909 139 0 0 chr5 19494217 19494361 -180135789 + AluSg/x SINE Alu 167 310 -2 1987 149 3 0 chr5 19494941 19495250 -180134900 + AluSx SINE Alu 1 310 -2 1891 211 21 0 chr5 19496476 19496855 -180133295 + MLT1B LTR MaLR 3 389 -1 256 147 29 44 chr5 19497474 19497542 -180132608 + CT-rich Low_complexity Low_complexity 3 69 0 2408 86 0 16 chr5 19498144 19498457 -180131693 + AluSc SINE Alu 1 308 -1 1598 155 45 38 chr5 19498593 19498884 -180131266 + AluJb SINE Alu 1 293 -19 505 228 181 9 chr5 19499377 19499609 -180130541 - MER5C DNA MER1_type -45 279 8 21 71 0 0 chr5 19500401 19500443 -180129707 + AT_rich Low_complexity Low_complexity 1 42 0 2107 105 3 7 chr5 19500448 19500734 -180129416 + AluSx SINE Alu 1 285 -27 465 235 0 0 chr5 19500741 19500873 -180129277 + (CATATA)n Simple_repeat Simple_repeat 2 133 0 23 33 0 0 chr5 19501309 19501339 -180128811 + AT_rich Low_complexity Low_complexity 1 30 0 2853 91 3 0 chr5 19501471 19501834 -180128316 + THE1B LTR MaLR 1 364 0 1917 168 0 3 chr5 19503114 19503412 -180126738 - AluJo SINE Alu -15 297 1 1416 257 150 2 chr5 19503844 19504358 -180125792 + MLT1E LTR MaLR 1 590 -3 43672 44 11 5 chr5 19506161 19511972 -180118178 - L1PA4 LINE L1 -311 5844 1 865 299 165 24 chr5 19511974 19512289 -180117861 - L2 LINE L2 -278 3035 2766 1908 152 10 3 chr5 19512289 19512592 -180117558 - AluSx SINE Alu -7 305 1 865 299 165 24 chr5 19512592 19512959 -180117191 - L2 LINE L2 -547 2766 2259 503 283 279 24 chr5 19512996 19513274 -180116876 - L2 LINE L2 -1841 1473 1267 2127 164 126 42 chr5 19513274 19513751 -180116399 - MLT2B1 LTR ERVL -1 519 3 503 283 279 24 chr5 19513751 19514001 -180116149 - L2 LINE L2 -2047 1267 1082 2452 88 7 0 chr5 19514001 19514309 -180115841 + AluY SINE Alu 1 310 -1 503 283 279 24 chr5 19514309 19514765 -180115385 - L2 LINE L2 -2232 1082 237 1046 299 46 19 chr5 19515139 19515664 -180114486 - HERV16 LTR ERVL -2490 2524 2006 770 266 46 14 chr5 19515772 19515990 -180114160 - HERV16 LTR ERVL -3165 1831 1607 764 267 73 54 chr5 19516230 19516601 -180113549 + MLT1J1 LTR MaLR 69 446 0 2120 105 14 14 chr5 19516660 19516955 -180113195 - AluSc SINE Alu -13 296 2 1778 131 134 7 chr5 19517098 19517403 -180112747 - MER2 DNA MER2_type 0 344 1 973 203 85 42 chr5 19517706 19518046 -180112104 - MLT1D LTR MaLR 0 505 111 2096 120 14 0 chr5 19518046 19518330 -180111820 - AluSg SINE Alu -22 288 1 973 203 85 42 chr5 19518330 19518441 -180111709 - MLT1D LTR MaLR -394 111 6 3517 42 16 5 chr5 19518474 19518907 -180111243 - L1PA4 LINE L1 -3 6152 5715 1047 192 49 8 chr5 19518940 19519185 -180110965 + MER39 LTR ERV1 393 647 -60 27395 48 9 5 chr5 19519185 19522554 -180107596 - L1P LINE L1 -2762 3384 1 1737 170 38 3 chr5 19522608 19522897 -180107253 + AluJo SINE Alu 1 299 -13 311 313 180 27 chr5 19523286 19523586 -180106564 - L2 LINE L2 -1 3312 2967 2243 108 0 3 chr5 19523597 19523894 -180106256 - AluSx SINE Alu -16 296 1 356 286 93 54 chr5 19524435 19524596 -180105554 - L1M4 LINE L1 -1727 4419 4241 21296 29 9 3 chr5 19524596 19527920 -180102230 - L1PA4 LINE L1 0 6155 2822 356 286 93 54 chr5 19527920 19528038 -180102112 - L1M4 LINE L1 -1905 4241 4129 789 254 24 52 chr5 19528195 19528443 -180101707 - MLT1F1 LTR MaLR -326 241 1 289 262 69 55 chr5 19528455 19528600 -180101550 - MLT1G1-int LTR MaLR -15 1720 1574 2210 128 0 0 chr5 19529141 19529439 -180100711 + AluSx SINE Alu 1 298 -14 591 330 42 13 chr5 19529671 19530114 -180100036 - MLT1G1-int LTR MaLR -795 576 2 881 273 130 55 chr5 19530117 19530628 -180099522 - MLT1G1 LTR MaLR -3 592 1 426 150 59 124 chr5 19530628 19530772 -180099378 - MLT1J LTR MaLR -377 134 1 1900 176 94 8 chr5 19531060 19531452 -180098698 - MSTB LTR MaLR 0 426 1 1472 287 67 25 chr5 19531527 19531982 -180098168 + MLT1H LTR MaLR 9 490 -59 2075 106 23 3 chr5 19531982 19532283 -180097867 + AluSq SINE Alu 1 307 -6 1472 287 67 25 chr5 19532283 19532346 -180097804 + MLT1H LTR MaLR 490 549 0 847 194 4 106 chr5 19533323 19533550 -180096600 - MER63A DNA MER1_type 0 210 7 1798 105 49 0 chr5 19533786 19534052 -180096098 + AluSg SINE Alu 1 279 -31 284 318 73 73 chr5 19534094 19534286 -180095864 - L2 LINE L2 -524 2790 2599 924 269 23 0 chr5 19534959 19535178 -180094972 - MER58A DNA MER1_type 0 224 1 1855 168 7 0 chr5 19535509 19535819 -180094331 - AluJo SINE Alu 0 312 1 2459 122 11 6 chr5 19535848 19536210 -180093940 + THE1B LTR MaLR 1 364 0 811 205 13 0 chr5 19536743 19536894 -180093256 + AluJb SINE Alu 140 292 -20 1071 164 19 56 chr5 19536912 19537125 -180093025 - MER2 DNA MER2_type -140 205 1 562 297 29 24 chr5 19537158 19537367 -180092783 + L1MD2 LINE L1 6140 6349 -10 1969 106 57 0 chr5 19538118 19538401 -180091749 + AluSg SINE Alu 1 299 -11 2105 86 38 0 chr5 19542391 19542682 -180087468 - AluY SINE Alu -9 302 1 933 202 62 5 chr5 19542988 19543196 -180086954 - MER58A DNA MER1_type -3 221 2 379 253 163 11 chr5 19544208 19544398 -180085752 + L2 LINE L2 2978 3196 -117 2228 109 0 0 chr5 19545191 19545494 -180084656 + AluSx SINE Alu 1 303 -9 2307 80 0 3 chr5 19547371 19547672 -180082478 + AluSq SINE Alu 1 300 -13 23 0 0 0 chr5 19547749 19547772 -180082378 + AT_rich Low_complexity Low_complexity 1 23 0 1894 164 0 0 chr5 19548640 19548944 -180081206 + AluSx SINE Alu 1 304 -8 1991 117 0 3 chr5 19549619 19549909 -180080241 + AluSg SINE Alu 1 289 -21 790 144 50 29 chr5 19549914 19550053 -180080097 + FLAM_C SINE Alu 2 143 0 27 29 0 0 chr5 19550433 19550467 -180079683 + AT_rich Low_complexity Low_complexity 1 34 0 2382 67 0 0 chr5 19550601 19550899 -180079251 - AluY SINE Alu -13 298 1 2132 105 0 3 chr5 19550950 19551245 -180078905 - AluSq SINE Alu -19 294 1 2053 108 3 23 chr5 19551482 19551788 -180078362 + AluSx SINE Alu 1 300 -12 2063 124 3 0 chr5 19552709 19553007 -180077143 - AluSx SINE Alu -13 299 1 258 344 56 16 chr5 19553381 19553506 -180076644 - L2 LINE L2 -2 3270 3141 1130 172 23 18 chr5 19553975 19554196 -180075954 + AluJb SINE Alu 81 302 -10 22 0 0 0 chr5 19555973 19555995 -180074155 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 19557365 19557400 -180072750 + AT_rich Low_complexity Low_complexity 1 35 0 1670 154 20 10 chr5 19557435 19557728 -180072422 - AluSp SINE Alu -17 296 1 1892 125 17 3 chr5 19557952 19558248 -180071902 + AluSx SINE Alu 1 300 -12 1613 166 38 3 chr5 19558402 19558692 -180071458 - AluJo SINE Alu -8 304 5 1393 118 77 14 chr5 19559463 19559684 -180070466 + MER46A DNA MER2_type 2 236 0 1997 101 38 3 chr5 19559724 19560011 -180070139 - AluSq SINE Alu -16 297 1 1734 165 4 0 chr5 19560226 19560538 -180069612 + AluJo SINE Alu 3 315 0 2152 99 3 0 chr5 19561656 19561949 -180068201 + AluSp SINE Alu 14 307 -6 371 259 21 77 chr5 19562296 19562439 -180067711 + MIR SINE MIR 96 230 -32 977 199 108 111 chr5 19563226 19563567 -180066583 - MER2 DNA MER2_type 0 345 6 2350 67 0 3 chr5 19564172 19564470 -180065680 + AluY SINE Alu 1 297 -14 2212 100 0 0 chr5 19564601 19564900 -180065250 + AluSx SINE Alu 1 299 -13 866 243 69 107 chr5 19564915 19565323 -180064827 + L1MC5 LINE L1 7222 7593 -368 2238 104 3 0 chr5 19565323 19565631 -180064519 + AluSx SINE Alu 1 309 -3 866 243 69 107 chr5 19565631 19565945 -180064205 + L1MC5 LINE L1 7593 7917 -44 1596 135 4 11 chr5 19566185 19566451 -180063699 + AluJb SINE Alu 17 280 -32 2211 98 0 0 chr5 19568236 19568532 -180061618 + AluSx SINE Alu 1 296 -16 24 67 0 0 chr5 19569327 19569372 -180060778 + AT_rich Low_complexity Low_complexity 1 45 0 2269 91 0 0 chr5 19569761 19570059 -180060091 + AluSg SINE Alu 2 299 -11 328 261 17 9 chr5 19570480 19570595 -180059555 + A-rich Low_complexity Low_complexity 1 116 0 2106 107 7 0 chr5 19570604 19570894 -180059256 + AluSg SINE Alu 1 292 -18 22 0 0 0 chr5 19571249 19571271 -180058879 + AT_rich Low_complexity Low_complexity 1 22 0 1548 173 37 0 chr5 19571273 19571586 -180058564 + AluJo SINE Alu 1 323 0 2384 57 0 0 chr5 19571808 19572107 -180058043 - AluY SINE Alu -12 299 1 215 188 0 14 chr5 19572195 19572264 -180057886 + GA-rich Low_complexity Low_complexity 1 68 0 861 139 0 0 chr5 19572855 19572999 -180057151 + AluSg/x SINE Alu 165 308 -2 1874 149 3 0 chr5 19573579 19573888 -180056262 + AluSx SINE Alu 1 310 -2 1901 211 21 0 chr5 19575113 19575492 -180054658 + MLT1B LTR MaLR 3 389 -1 256 147 29 44 chr5 19576111 19576179 -180053971 + CT-rich Low_complexity Low_complexity 3 69 0 2277 86 0 16 chr5 19576781 19577094 -180053056 + AluSc SINE Alu 1 308 -1 1483 155 45 38 chr5 19577229 19577520 -180052630 + AluJb SINE Alu 1 293 -19 625 246 177 0 chr5 19578013 19578245 -180051905 - MER5C DNA MER1_type -44 280 8 21 71 0 0 chr5 19579037 19579079 -180051071 + AT_rich Low_complexity Low_complexity 1 42 0 1984 105 3 7 chr5 19579084 19579370 -180050780 + AluSx SINE Alu 1 285 -27 318 272 22 22 chr5 19579372 19579464 -180050686 - L1MC4 LINE L1 -1338 6704 6613 183 204 0 0 chr5 19579465 19579509 -180050641 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 23 33 0 0 chr5 19579945 19579975 -180050175 + AT_rich Low_complexity Low_complexity 1 30 0 2856 91 3 0 chr5 19580107 19580470 -180049680 + THE1B LTR MaLR 1 364 0 1917 168 0 3 chr5 19581749 19582047 -180048103 - AluJo SINE Alu -15 297 1 206 263 88 95 chr5 19582333 19582470 -180047680 - L2 LINE L2 -188 3084 2949 1416 257 150 2 chr5 19582479 19582993 -180047157 + MLT1E LTR MaLR 1 590 -3 421 250 154 54 chr5 19584555 19584685 -180045465 - L1MC5 LINE L1 -61 7900 7784 2311 64 51 0 chr5 19584685 19584980 -180045170 + AluSg SINE Alu 1 310 0 421 250 154 54 chr5 19584980 19585129 -180045021 - L1MC5 LINE L1 -177 7784 7593 204 40 0 0 chr5 19585291 19585316 -180044834 + (TGGGGG)n Simple_repeat Simple_repeat 5 29 0 226 250 0 0 chr5 19587178 19587230 -180042920 - L2 LINE L2 -1 3312 3261 1678 58 0 19 chr5 19587790 19587997 -180042153 + AluY SINE Alu 70 272 -39 1553 132 48 0 chr5 19588025 19588275 -180041875 + L1MA2 LINE L1 6014 6275 -29 30 0 0 0 chr5 19588277 19588307 -180041843 + AT_rich Low_complexity Low_complexity 1 30 0 430 216 0 0 chr5 19588502 19588576 -180041574 + Tigger3(Golem) DNA MER2_type 2 75 -2954 243 0 0 0 chr5 19588576 19588603 -180041547 + (T)n Simple_repeat Simple_repeat 1 27 0 917 128 8 8 chr5 19588616 19588749 -180041401 - AluSp SINE Alu -143 170 38 668 214 0 13 chr5 19588771 19588925 -180041225 + L1MB8 LINE L1 6027 6178 0 2358 101 0 0 chr5 19588943 19589239 -180040911 + AluSx SINE Alu 1 296 -16 2701 26 3 0 chr5 19589688 19589990 -180040160 + AluY SINE Alu 1 303 -8 189 346 0 0 chr5 19590255 19590307 -180039843 - MIR SINE MIR -65 143 92 2094 126 3 17 chr5 19590315 19590617 -180039533 - AluSx SINE Alu -14 298 1 6299 157 67 36 chr5 19591248 19592489 -180037661 + pTR5 LTR ERV1 741 2019 -419 370 214 31 20 chr5 19592489 19592587 -180037563 + LTR30 LTR ERV1 544 642 -80 1497 108 5 9 chr5 19592589 19592812 -180037338 + pTR5 LTR ERV1 171 392 -2046 2263 115 0 0 chr5 19593163 19593458 -180036692 + AluSp SINE Alu 1 295 -18 441 95 0 0 chr5 19593458 19593521 -180036629 + (TG)n Simple_repeat Simple_repeat 2 64 0 2182 90 0 17 chr5 19593902 19594241 -180035909 - AluY SINE Alu 0 334 1 4398 207 120 15 chr5 19596017 19596578 -180033572 + L1MD3 LINE L1 4832 4533 -1613 2460 58 0 39 chr5 19596578 19596889 -180033261 + AluY SINE Alu 1 299 -12 4398 207 120 15 chr5 19596889 19597851 -180032299 + L1MD3 LINE L1 4532 5392 -754 213 116 23 47 chr5 19598252 19598295 -180031855 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 2263 114 0 28 chr5 19598559 19598876 -180031274 - AluSg SINE Alu -2 308 1 220 288 55 0 chr5 19598943 19599016 -180031134 - MIR SINE MIR -29 233 157 2245 104 10 3 chr5 19599270 19599568 -180030582 - AluSx SINE Alu -12 300 1 227 356 0 0 chr5 19599764 19599854 -180030296 + (TAG)n Simple_repeat Simple_repeat 1 90 0 608 271 33 28 chr5 19599874 19600088 -180030062 - MIR SINE MIR -44 218 4 613 210 118 0 chr5 19600298 19600417 -180029733 + MER58A DNA MER1_type 4 136 0 284 170 57 0 chr5 19600417 19600464 -180029686 + MER58A DNA MER1_type 174 223 -1 1072 178 50 31 chr5 19600503 19600761 -180029389 + MER33 DNA MER1_type 61 323 -1 195 222 48 29 chr5 19602146 19602215 -180027935 - MIR SINE MIR -86 122 78 283 271 0 0 chr5 19602302 19602372 -180027778 + MER5C DNA MER1_type 53 122 -202 258 30 0 0 chr5 19602469 19602502 -180027648 - LTR12 LTR ERV1 -397 317 285 233 267 100 0 chr5 19602502 19602592 -180027558 + MER5C DNA MER1_type 226 324 0 2493 61 24 0 chr5 19602929 19603226 -180026924 - AluY SINE Alu -7 304 1 312 206 0 29 chr5 19603600 19603668 -180026482 + MLT1L LTR MaLR 332 397 -218 2350 92 0 0 chr5 19604527 19604821 -180025329 - AluSg1 SINE Alu -11 298 5 180 0 0 0 chr5 19604822 19604842 -180025308 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2029 118 0 21 chr5 19604842 19605131 -180025019 - AluSx SINE Alu -29 283 1 225 211 74 53 chr5 19605318 19605413 -180024737 + L1ME3A LINE L1 6074 6170 0 249 163 0 0 chr5 19605703 19605752 -180024398 + GA-rich Low_complexity Low_complexity 3 51 0 2311 112 0 0 chr5 19606334 19606637 -180023513 + AluSx SINE Alu 1 303 -9 235 268 28 14 chr5 19606750 19606821 -180023329 - MIR3 SINE MIR -23 185 114 2409 91 0 0 chr5 19608005 19608302 -180021848 + AluSq SINE Alu 1 297 -16 1522 185 82 4 chr5 19608905 19609186 -180020964 + AluJo SINE Alu 1 303 -9 702 248 82 19 chr5 19611156 19611362 -180018788 + MER20 DNA MER1_type 1 219 0 2228 123 0 0 chr5 19612093 19612394 -180017756 + AluSg SINE Alu 1 301 -9 258 170 0 21 chr5 19612400 19612447 -180017703 - L1ME LINE L1 -544 5577 5532 876 192 48 0 chr5 19612523 19612690 -180017460 + FAM SINE Alu 1 175 0 280 222 67 44 chr5 19612947 19613037 -180017113 + L1ME LINE L1 5568 5659 -462 21 0 0 0 chr5 19615614 19615635 -180014515 + AT_rich Low_complexity Low_complexity 1 21 0 1962 117 36 7 chr5 19616026 19616307 -180013843 + AluSx SINE Alu 7 295 -17 2017 144 3 0 chr5 19616321 19616612 -180013538 + AluSp SINE Alu 1 292 -21 2200 131 0 0 chr5 19616843 19617140 -180013010 + AluSx SINE Alu 1 297 -15 899 207 78 12 chr5 19617259 19617515 -180012635 + L1MC2 LINE L1 6072 6344 0 214 276 26 0 chr5 19618461 19618537 -180011613 + L3 LINE CR1 1306 1383 -194 2330 84 7 7 chr5 19618540 19618839 -180011311 + AluSq SINE Alu 1 299 -14 1826 156 3 34 chr5 19618886 19619207 -180010943 + AluJo SINE Alu 1 311 -1 4330 80 5 0 chr5 19619395 19619946 -180010204 - MER41A LTR ERV1 0 554 1 530 314 135 4 chr5 19619976 19620228 -180009922 + HsTC2 DNA Tc2 127 411 -1487 291 284 46 0 chr5 19620232 19620341 -180009809 + HsTC2 DNA Tc2 1785 1898 0 249 200 0 43 chr5 19621106 19621119 -180009031 + GA-rich Low_complexity Low_complexity 3 15 -54 2484 74 0 3 chr5 19621119 19621429 -180008721 + AluY SINE Alu 1 309 -2 249 200 0 43 chr5 19621429 19621485 -180008665 + GA-rich Low_complexity Low_complexity 15 69 0 961 189 6 0 chr5 19621549 19621718 -180008432 - AluJb SINE Alu -8 304 135 1999 122 6 47 chr5 19621719 19622038 -180008112 - AluSx SINE Alu -6 306 1 226 159 0 23 chr5 19622044 19622088 -180008062 + GA-rich Low_complexity Low_complexity 1 43 0 309 51 0 0 chr5 19622088 19622127 -180008023 + (GGGA)n Simple_repeat Simple_repeat 3 41 0 2111 105 7 0 chr5 19622715 19622991 -180007159 + AluSx SINE Alu 29 306 -6 22 0 0 0 chr5 19623884 19623906 -180006244 + AT_rich Low_complexity Low_complexity 1 22 0 2233 100 4 0 chr5 19624196 19624501 -180005649 + AluSp SINE Alu 1 306 0 1928 115 49 18 chr5 19624963 19625249 -180004901 - AluSg SINE Alu -11 299 5 369 223 87 10 chr5 19625643 19625746 -180004404 - MER104 DNA Tc2 -12 168 58 2163 119 0 16 chr5 19625758 19626068 -180004082 - AluSx SINE Alu -7 305 1 2264 92 6 16 chr5 19626635 19626949 -180003201 - AluY SINE Alu 0 311 1 2309 105 3 0 chr5 19626949 19627253 -180002897 - AluSx SINE Alu -7 305 1 196 82 31 72 chr5 19627469 19627566 -180002584 + (TTAAA)n Simple_repeat Simple_repeat 3 95 0 212 258 0 0 chr5 19627903 19627965 -180002185 + A-rich Low_complexity Low_complexity 1 62 0 2353 60 0 0 chr5 19628643 19628947 -180001203 - AluY SINE Alu 0 304 1 818 213 94 109 chr5 19629213 19629550 -180000600 - L1MC5 LINE L1 -30 7931 7602 1774 171 30 7 chr5 19629550 19629848 -180000302 - AluJo SINE Alu -7 305 1 818 213 94 109 chr5 19629848 19629998 -180000152 - L1MC5 LINE L1 -359 7602 7451 1901 149 0 56 chr5 19630305 19630626 -179999524 + AluJb SINE Alu 5 307 -5 991 176 0 0 chr5 19630626 19630771 -179999379 + AluJb SINE Alu 137 284 -28 426 20 0 0 chr5 19630771 19630822 -179999328 + (CA)n Simple_repeat Simple_repeat 1 51 0 991 176 0 0 chr5 19630822 19630835 -179999315 + AluJb SINE Alu 283 295 -17 1891 157 0 20 chr5 19631131 19631431 -179998719 - AluJb SINE Alu -6 306 13 274 321 37 8 chr5 19631961 19632095 -179998055 + MIR SINE MIR 70 207 -55 539 268 42 19 chr5 19632124 19632344 -179997806 + MIR SINE MIR 37 262 0 2413 75 3 3 chr5 19632407 19632702 -179997448 - AluSq SINE Alu -18 295 1 2351 85 0 31 chr5 19633651 19633969 -179996181 + AluY SINE Alu 2 309 -2 304 256 40 72 chr5 19634267 19634392 -179995758 + MIR SINE MIR 48 168 -94 2197 116 0 0 chr5 19634457 19634771 -179995379 - AluSq SINE Alu 0 314 1 1479 169 23 49 chr5 19635129 19635437 -179994713 - AluJo SINE Alu -12 300 1 243 0 0 0 chr5 19635596 19635623 -179994527 + (A)n Simple_repeat Simple_repeat 1 27 0 2131 129 7 16 chr5 19636157 19636466 -179993684 + AluSx SINE Alu 1 306 -6 2077 124 3 10 chr5 19637345 19637644 -179992506 + AluSx SINE Alu 6 302 -10 2422 95 0 0 chr5 19638160 19638464 -179991686 - AluSx SINE Alu -7 305 2 2690 78 101 12 chr5 19638603 19639011 -179991139 + MLT2A1 LTR ERVL 1 444 0 21 36 0 0 chr5 19639054 19639082 -179991068 + AT_rich Low_complexity Low_complexity 1 28 0 609 270 95 0 chr5 19639111 19639333 -179990817 - MIR SINE MIR -5 257 15 1813 187 25 104 chr5 19639860 19639921 -179990229 + Charlie1b DNA MER1_type 11 75 -2686 1840 85 38 114 chr5 19639921 19640237 -179989913 - AluYb8 SINE Alu -22 296 5 1539 128 178 8 chr5 19640243 19640501 -179989649 - AluY SINE Alu -9 302 1 1813 187 25 104 chr5 19640501 19640644 -179989506 + Charlie1b DNA MER1_type 80 233 -2528 2136 118 3 13 chr5 19640644 19640950 -179989200 - AluSx SINE Alu -9 303 1 1813 187 25 104 chr5 19640950 19641163 -179988987 + Charlie1b DNA MER1_type 233 384 -2377 2271 113 0 0 chr5 19641163 19641454 -179988696 - AluSx SINE Alu -21 291 1 1813 187 25 104 chr5 19641454 19641584 -179988566 + Charlie1b DNA MER1_type 384 523 0 1894 165 0 9 chr5 19642137 19642452 -179987698 - AluJb SINE Alu 0 312 1 2204 94 7 17 chr5 19642819 19643116 -179987034 - AluSx SINE Alu -18 294 1 252 0 0 0 chr5 19643399 19643427 -179986723 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 753 107 27 9 chr5 19643427 19643539 -179986611 - FLAM_C SINE Alu -24 119 6 862 157 11 62 chr5 19643554 19643732 -179986418 + FRAM SINE Alu 1 161 -15 2084 139 7 0 chr5 19644234 19644544 -179985606 - AluSp SINE Alu -1 312 1 265 246 53 18 chr5 19644750 19644864 -179985286 + L1P5 LINE L1 5483 5600 -556 1709 178 0 7 chr5 19645011 19645354 -179984796 - AluJb SINE Alu 0 341 1 186 43 0 0 chr5 19645360 19645383 -179984767 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2452 71 3 3 chr5 19645609 19645906 -179984244 - AluSp SINE Alu -16 297 1 1009 242 125 24 chr5 19646181 19646557 -179983593 + L1ME1 LINE L1 5748 6161 -5 1283 160 9 5 chr5 19646940 19647153 -179982997 + AluJo SINE Alu 87 300 -12 2517 71 0 7 chr5 19647886 19648195 -179981955 - AluY SINE Alu -4 307 1 34 24 0 0 chr5 19648214 19648255 -179981895 + AT_rich Low_complexity Low_complexity 1 41 0 183 246 98 0 chr5 19648448 19648509 -179981641 + L2 LINE L2 3247 3313 0 862 168 52 7 chr5 19648909 19649064 -179981086 - FRAM SINE Alu -18 158 1 243 0 0 0 chr5 19649064 19649091 -179981059 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2137 94 4 0 chr5 19649095 19649362 -179980788 - AluSg SINE Alu -30 280 13 1913 159 0 10 chr5 19649363 19649671 -179980479 - AluJb SINE Alu -7 305 1 283 263 21 11 chr5 19649739 19649834 -179980316 - L1M4 LINE L1 -1949 4197 4102 333 281 195 14 chr5 19651049 19651259 -179978891 + MIR SINE MIR 9 256 -6 2308 96 3 10 chr5 19651316 19651628 -179978522 - AluSg SINE Alu 0 310 1 2051 170 65 10 chr5 19651863 19652167 -179977983 + MER61C LTR ERV1 1 317 -117 2647 36 7 0 chr5 19652167 19652469 -179977681 - AluY SINE Alu -7 304 1 2051 170 65 10 chr5 19652469 19652594 -179977556 + MER61C LTR ERV1 317 434 0 2160 123 3 7 chr5 19653380 19653680 -179976470 - AluSx SINE Alu -13 299 1 2279 107 0 0 chr5 19654559 19654859 -179975291 - AluSx SINE Alu -12 300 1 774 176 8 0 chr5 19654883 19655008 -179975142 - FLAM_A SINE Alu -4 129 4 230 313 75 34 chr5 19655604 19655751 -179974399 + MIR3 SINE MIR 8 160 -48 1048 174 35 0 chr5 19655751 19655923 -179974227 - MER58A DNA MER1_type 0 224 47 593 176 44 52 chr5 19655932 19656068 -179974082 + L1MB3 LINE L1 6042 6176 -7 233 135 96 19 chr5 19656102 19656154 -179973996 - MER58A DNA MER1_type -168 56 1 194 283 67 0 chr5 19657229 19657289 -179972861 + L2 LINE L2 3194 3257 -56 236 277 116 0 chr5 19658614 19658726 -179971424 + MLT1L LTR MaLR 481 605 -10 2309 110 0 16 chr5 19659067 19659384 -179970766 + AluSx SINE Alu 1 312 0 285 266 76 0 chr5 19659611 19659690 -179970460 + MLT1I LTR MaLR 319 403 -6 733 231 61 39 chr5 19659885 19660114 -179970036 - MER46A DNA MER2_type 0 236 3 * 1025 193 25 55 chr5 19660114 19660214 -179969936 + MER46A DNA MER2_type 144 236 0 260 83 0 0 chr5 19660264 19660300 -179969850 + MER5B DNA MER1_type 3 38 -140 26 0 0 0 chr5 19660341 19660367 -179969783 + AT_rich Low_complexity Low_complexity 1 26 0 2077 120 0 0 chr5 19660367 19660643 -179969507 + AluSx SINE Alu 1 276 -36 207 0 0 0 chr5 19661090 19661113 -179969037 + (A)n Simple_repeat Simple_repeat 1 23 0 270 310 0 11 chr5 19661196 19661283 -179968867 - L2 LINE L2 -541 2773 2688 2114 67 22 8 chr5 19661300 19661568 -179968582 - AluSx SINE Alu -36 276 5 367 204 29 29 chr5 19661808 19661911 -179968239 + L1ME2 LINE L1 6055 6157 -7 312 329 96 14 chr5 19661924 19662143 -179968007 - L2 LINE L2 -849 2465 2229 253 281 70 53 chr5 19662283 19662511 -179967639 - L2 LINE L2 -1561 1753 1522 893 204 73 11 chr5 19662586 19662777 -179967373 + MER58A DNA MER1_type 6 208 -16 1704 144 46 25 chr5 19662999 19663283 -179966867 + AluSx SINE Alu 16 305 -7 2000 142 21 48 chr5 19663870 19664244 -179965906 + THE1B LTR MaLR 1 364 0 222 171 0 0 chr5 19664374 19664415 -179965735 + (TA)n Simple_repeat Simple_repeat 2 42 0 315 122 0 0 chr5 19665018 19665067 -179965083 + (CA)n Simple_repeat Simple_repeat 2 50 0 255 61 0 0 chr5 19665587 19665620 -179964530 + (CA)n Simple_repeat Simple_repeat 2 34 0 318 107 0 0 chr5 19665620 19665676 -179964474 + (GA)n Simple_repeat Simple_repeat 1 56 0 1949 154 7 0 chr5 19666799 19667098 -179963052 - AluSx SINE Alu -11 301 1 23 0 0 0 chr5 19667098 19667121 -179963029 + AT_rich Low_complexity Low_complexity 1 23 0 2399 63 7 10 chr5 19667124 19667426 -179962724 + AluSp SINE Alu 2 302 -11 22 0 0 0 chr5 19667857 19667879 -179962271 + AT_rich Low_complexity Low_complexity 1 22 0 501 146 63 101 chr5 19668704 19668810 -179961340 + L1MB4 LINE L1 5953 6053 -127 2094 119 11 0 chr5 19668810 19669096 -179961054 + AluSx SINE Alu 1 289 -23 501 146 63 101 chr5 19669096 19669147 -179961003 + L1MB4 LINE L1 6053 6104 -76 638 148 0 17 chr5 19669153 19669268 -179960882 - FLAM_C SINE Alu -1 142 30 453 183 0 0 chr5 19669270 19669352 -179960798 + L1MB4 LINE L1 6091 6172 -8 2168 107 7 3 chr5 19669396 19669695 -179960455 + AluSg SINE Alu 1 300 -10 422 239 8 0 chr5 19669696 19669830 -179960320 + GA-rich Low_complexity Low_complexity 2 136 0 * 840 125 5 27 chr5 19669801 19669985 -179960165 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1090 171 0 11 chr5 19670233 19670420 -179959730 + MLT1B LTR MaLR 1 185 -205 595 251 61 79 chr5 19670613 19670631 -179959519 + L1PB4 LINE L1 5546 5563 -593 1488 143 4 8 chr5 19670631 19670868 -179959282 + MER46A DNA MER2_type 1 236 0 595 251 61 79 chr5 19670868 19671179 -179958971 + L1PB4 LINE L1 5563 5869 -287 * 2443 164 107 35 chr5 19670907 19671345 -179958805 + L1MB5 LINE L1 5593 6079 -95 1650 182 35 43 chr5 19671345 19671741 -179958409 + MSTD LTR MaLR 4 396 0 2443 164 107 35 chr5 19671741 19671845 -179958305 + L1MB5 LINE L1 6079 6174 0 30 0 0 0 chr5 19672414 19672444 -179957706 + AT_rich Low_complexity Low_complexity 1 30 0 2091 132 0 3 chr5 19672983 19673279 -179956871 - AluSx SINE Alu -17 295 1 752 178 0 8 chr5 19673762 19673891 -179956259 + FLAM_C SINE Alu 2 129 -14 2044 127 0 13 chr5 19674698 19674997 -179955153 - AluSx SINE Alu -17 295 1 1325 181 24 0 chr5 19675337 19675585 -179954565 + L1MB3 LINE L1 5716 5969 -214 1144 169 74 4 chr5 19675586 19675829 -179954321 + L1MB2 LINE L1 5908 6167 -4 2432 78 10 0 chr5 19675862 19676170 -179953980 + AluY SINE Alu 1 311 0 1657 139 45 45 chr5 19676320 19676629 -179953521 + AluJb SINE Alu 1 309 -3 1768 156 24 17 chr5 19676629 19676924 -179953226 + AluJb SINE Alu 1 297 -15 601 105 0 0 chr5 19678077 19678163 -179951987 + AluS SINE Alu 2 87 -226 1618 141 21 4 chr5 19678163 19678404 -179951746 + AluJb SINE Alu 46 290 -22 2285 110 13 0 chr5 19678666 19678974 -179951176 + AluSx SINE Alu 1 312 0 280 211 0 77 chr5 19679465 19679548 -179950602 + L1MA9 LINE L1 6217 6305 -7 1815 126 13 53 chr5 19679548 19679850 -179950300 + AluSx SINE Alu 1 290 -22 2288 70 13 20 chr5 19679850 19680148 -179950002 + AluY SINE Alu 1 296 -15 280 211 0 77 chr5 19680148 19680167 -179949983 + L1MA9 LINE L1 6303 6312 0 1757 165 16 32 chr5 19681667 19681983 -179948167 + AluJo SINE Alu 1 311 -1 2354 90 7 0 chr5 19682157 19682456 -179947694 - AluSg SINE Alu -9 301 1 1612 162 72 7 chr5 19683996 19684274 -179945876 + AluJo SINE Alu 1 296 -16 2273 101 10 3 chr5 19684274 19684581 -179945569 + AluSx SINE Alu 1 309 -3 765 242 68 5 chr5 19684660 19684850 -179945300 - MER20 DNA MER1_type -17 202 1 1928 157 0 3 chr5 19685025 19685331 -179944819 - AluJb SINE Alu -7 305 1 24 0 0 0 chr5 19686402 19686426 -179943724 + AT_rich Low_complexity Low_complexity 1 24 0 1205 200 0 96 chr5 19686720 19687065 -179943085 + AluJo SINE Alu 1 312 0 1784 228 77 57 chr5 19687077 19687626 -179942524 + MLT1E2 LTR MaLR 1 565 -61 2423 49 3 23 chr5 19687626 19687930 -179942220 - AluY SINE Alu -13 298 1 1784 228 77 57 chr5 19687930 19687994 -179942156 + MLT1E2 LTR MaLR 565 626 0 731 176 24 0 chr5 19688533 19688658 -179941492 + FLAM_A SINE Alu 4 131 -2 1044 222 17 17 chr5 19688704 19688938 -179941212 - MER46A DNA MER2_type -1 235 2 235 304 0 0 chr5 19689027 19689096 -179941054 - L2 LINE L2 -3 3310 3242 2287 84 7 7 chr5 19689543 19689839 -179940311 + AluSc SINE Alu 1 296 -13 2421 71 10 0 chr5 19690017 19690313 -179939837 - AluSc SINE Alu -10 299 1 2286 100 0 0 chr5 19690313 19690602 -179939548 - AluSg SINE Alu -20 290 2 504 48 0 0 chr5 19691836 19691899 -179938251 + (TG)n Simple_repeat Simple_repeat 2 64 0 1701 168 16 20 chr5 19691922 19692225 -179937925 - AluJb SINE Alu -10 302 1 352 166 81 8 chr5 19694292 19694660 -179935490 + (TA)n Simple_repeat Simple_repeat 1 395 0 2720 51 0 0 chr5 19694937 19695248 -179934902 - AluY SINE Alu 0 311 1 187 239 0 0 chr5 19695550 19695596 -179934554 + MIR SINE MIR 202 247 -15 908 79 173 0 chr5 19695620 19695759 -179934391 + L1PA11 LINE L1 6012 6174 0 265 294 95 47 chr5 19695868 19696079 -179934071 - L2 LINE L2 -105 3208 2988 2653 48 0 0 chr5 19696156 19696467 -179933683 - AluY SINE Alu 0 311 1 1990 130 0 11 chr5 19696674 19696958 -179933192 + AluSx SINE Alu 1 281 -31 180 150 0 0 chr5 19696963 19696983 -179933167 + (G)n Simple_repeat Simple_repeat 1 20 -20 2494 63 3 7 chr5 19696983 19697286 -179932864 - AluY SINE Alu -9 302 1 180 150 0 0 chr5 19697286 19697305 -179932845 + (G)n Simple_repeat Simple_repeat 19 40 0 470 207 0 63 chr5 19697831 19697942 -179932208 + MER20 DNA MER1_type 36 139 -80 2308 81 0 3 chr5 19698100 19698407 -179931743 + AluSc SINE Alu 1 306 0 485 250 149 0 chr5 19698904 19699092 -179931058 + MER112 DNA MER1_type 7 222 -38 879 204 6 0 chr5 19699215 19699372 -179930778 + AluSg/x SINE Alu 134 291 -19 2104 126 0 22 chr5 19699375 19699692 -179930458 + AluSg SINE Alu 1 310 0 280 326 50 21 chr5 19699805 19699946 -179930204 + MIR SINE MIR 104 248 -14 2146 114 7 10 chr5 19700800 19701099 -179929051 - AluSx SINE Alu -14 298 1 304 236 176 34 chr5 19701302 19701450 -179928700 - MIR SINE MIR -14 248 80 208 225 42 56 chr5 19701527 19701598 -179928552 + MIR SINE MIR 41 110 -152 1899 120 0 47 chr5 19701859 19702159 -179927991 + AluSx SINE Alu 24 309 -3 712 126 150 8 chr5 19702242 19702393 -179927757 - FRAM SINE Alu 0 169 1 248 237 79 26 chr5 19702483 19702559 -179927591 - L2 LINE L2 -49 3223 3144 270 81 0 0 chr5 19703399 19703436 -179926714 + (CA)n Simple_repeat Simple_repeat 2 38 0 2088 115 17 3 chr5 19703472 19703768 -179926382 + AluSx SINE Alu 1 300 -12 242 258 0 15 chr5 19704021 19704087 -179926063 + L1ME LINE L1 5601 5665 -456 363 23 0 0 chr5 19704194 19704238 -179925912 + (CA)n Simple_repeat Simple_repeat 1 44 0 1451 189 65 3 chr5 19704240 19704616 -179925534 + L1MD1 LINE L1 5626 6172 -70 * 5867 87 1 5 chr5 19704615 19705419 -179924731 + L1PB1 LINE L1 5351 6151 0 1519 182 27 17 chr5 19705481 19705777 -179924373 - AluJb SINE Alu -13 299 1 2346 101 0 0 chr5 19706750 19707047 -179923103 - AluSg SINE Alu -13 297 1 234 297 9 63 chr5 19707205 19707316 -179922834 + MIR SINE MIR 41 145 -63 2049 98 11 14 chr5 19708433 19708710 -179921440 + AluSg SINE Alu 5 280 -30 1512 103 94 5 chr5 19708789 19709012 -179921138 + AluSx SINE Alu 1 243 -69 189 0 0 0 chr5 19709028 19709049 -179921101 + (T)n Simple_repeat Simple_repeat 1 21 0 3288 157 47 8 chr5 19710270 19710563 -179919587 + L1MB7 LINE L1 5533 5813 -371 2258 98 3 0 chr5 19710563 19710859 -179919291 + AluSp SINE Alu 1 297 -16 3288 157 47 8 chr5 19710859 19711188 -179918962 + L1MB7 LINE L1 5813 6179 -5 10409 122 59 12 chr5 19711314 19712987 -179917163 + Tigger1 DNA MER2_type 40 1791 -627 1989 144 10 0 chr5 19712992 19713283 -179916867 + AluJb SINE Alu 1 294 -18 1235 146 0 0 chr5 19713298 19713490 -179916660 + Tigger5 DNA MER2_type 2132 2323 0 2006 128 3 3 chr5 19713662 19713944 -179916206 + AluSx SINE Alu 1 282 -30 261 75 0 0 chr5 19713944 19713984 -179916166 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr5 19714356 19714377 -179915773 + AT_rich Low_complexity Low_complexity 1 21 0 2266 96 0 10 chr5 19714387 19714688 -179915462 + AluSq SINE Alu 1 298 -15 1344 167 119 19 chr5 19716183 19716452 -179913698 + AluJo SINE Alu 14 309 -3 243 125 0 0 chr5 19716846 19716886 -179913264 + (CATA)n Simple_repeat Simple_repeat 1 40 0 471 206 84 8 chr5 19716944 19717075 -179913075 - MIR SINE MIR -88 174 34 384 22 0 0 chr5 19718478 19718523 -179911627 + (CA)n Simple_repeat Simple_repeat 2 46 0 1279 191 68 18 chr5 19718928 19719206 -179910944 + AluJo SINE Alu 1 292 -20 2441 92 0 0 chr5 19719228 19719531 -179910619 + AluSc SINE Alu 1 303 -6 2255 124 0 0 chr5 19720380 19720678 -179909472 + AluSx SINE Alu 1 298 -14 2271 90 24 0 chr5 19720694 19720982 -179909168 + AluY SINE Alu 1 295 -16 1794 174 11 0 chr5 19720993 19721280 -179908870 + AluJb SINE Alu 1 290 -22 1068 180 0 0 chr5 19721282 19721454 -179908696 + FAM SINE Alu 1 172 -3 927 142 20 0 chr5 19721739 19721887 -179908263 + FAM SINE Alu 22 172 -13 665 110 0 63 chr5 19722133 19722260 -179907890 - AluSp/q SINE Alu -6 307 189 933 138 6 50 chr5 19722348 19722508 -179907642 - AluSx SINE Alu -159 153 1 1043 149 0 0 chr5 19723014 19723168 -179906982 - FRAM SINE Alu -22 154 1 2162 95 3 14 chr5 19724313 19724625 -179905525 - AluSg SINE Alu 0 309 1 21 0 0 0 chr5 19724627 19724648 -179905502 + AT_rich Low_complexity Low_complexity 1 21 0 1866 120 25 32 chr5 19724869 19725153 -179904997 - AluSx SINE Alu -30 282 1 2440 95 0 0 chr5 19725820 19726126 -179904024 + AluSg SINE Alu 1 306 -4 269 106 0 21 chr5 19726142 19726189 -179903961 + (GGAA)n Simple_repeat Simple_repeat 1 46 0 188 333 93 0 chr5 19726756 19726864 -179903286 + MIR3 SINE MIR 85 202 -6 2493 63 0 13 chr5 19727132 19727432 -179902718 + AluY SINE Alu 1 296 -15 573 128 0 32 chr5 19728037 19728131 -179902019 + 5S rRNA rRNA 1 91 -30 1272 205 38 40 chr5 19728710 19729057 -179901093 + L1MB8 LINE L1 5796 6141 -37 225 0 0 0 chr5 19729077 19729102 -179901048 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2192 119 3 3 chr5 19729106 19729409 -179900741 + AluSq SINE Alu 1 303 -10 180 314 0 0 chr5 19729929 19729980 -179900170 - L3 LINE CR1 -1201 376 326 2150 112 31 0 chr5 19730633 19730919 -179899231 + AluSx SINE Alu 1 295 -17 290 222 201 21 chr5 19731060 19731204 -179898946 - MER96 DNA MER1_type? -2 173 4 721 239 11 37 chr5 19731840 19732028 -179898122 + MER5A DNA MER1_type 7 189 0 291 284 46 18 chr5 19732168 19732277 -179897873 - MER5B DNA MER1_type -62 116 5 795 215 143 5 chr5 19732475 19732684 -179897466 - MER58 DNA MER1_type -2182 238 1 180 0 0 0 chr5 19732801 19732821 -179897329 + (A)n Simple_repeat Simple_repeat 1 20 0 2105 139 0 0 chr5 19733040 19733335 -179896815 + AluSg SINE Alu 1 295 -15 1914 179 24 3 chr5 19733504 19733833 -179896317 - MLT1A1 LTR MaLR -4 361 26 1531 178 8 4 chr5 19733847 19734111 -179896039 + AluJo SINE Alu 22 286 -26 242 143 0 0 chr5 19734124 19734159 -179895991 - MLT1A1 LTR MaLR -330 35 1 338 299 53 48 chr5 19734755 19734942 -179895208 - MER5A DNA MER1_type 0 189 2 189 147 0 0 chr5 19735113 19735147 -179895003 + (TGGA)n Simple_repeat Simple_repeat 3 36 0 559 253 53 24 chr5 19735349 19735519 -179894631 - MER5B DNA MER1_type -1 177 3 2169 92 0 20 chr5 19735646 19735950 -179894200 + AluSq SINE Alu 1 298 -15 269 309 47 54 chr5 19736172 19736321 -179893829 + MIR SINE MIR 41 188 -74 25 0 0 0 chr5 19736919 19736944 -179893206 + AT_rich Low_complexity Low_complexity 1 25 0 1714 182 0 0 chr5 19738179 19738481 -179891669 + AluJb SINE Alu 1 302 -10 1353 114 3 70 chr5 19739908 19740246 -179889904 + AluSx SINE Alu 21 312 0 600 176 91 30 chr5 19740247 19740406 -179889744 + L1MB4 LINE L1 6005 6174 -1 477 0 0 0 chr5 19740406 19740459 -179889691 + (CA)n Simple_repeat Simple_repeat 2 54 0 386 216 0 0 chr5 19740853 19740927 -179889223 + MER116 DNA Mariner 1 74 -6 2126 87 0 10 chr5 19742725 19743024 -179887126 + AluY SINE Alu 1 296 -15 915 197 82 41 chr5 19743396 19743425 -179886725 + AluJo SINE Alu 9 35 -277 2123 82 0 50 chr5 19743425 19743744 -179886406 - AluY SINE Alu -8 303 1 915 197 82 41 chr5 19743744 19743983 -179886167 + AluJo SINE Alu 35 288 -24 1619 145 0 30 chr5 19743991 19744288 -179885862 + AluSx SINE Alu 1 288 -24 21 36 0 0 chr5 19744289 19744317 -179885833 + AT_rich Low_complexity Low_complexity 1 28 0 270 81 0 0 chr5 19744329 19744366 -179885784 + (AGGGGG)n Simple_repeat Simple_repeat 5 41 0 395 202 225 23 chr5 19744810 19744939 -179885211 + MER5A DNA MER1_type 14 168 -21 1974 104 3 10 chr5 19745031 19745329 -179884821 + AluSp SINE Alu 4 299 -14 828 207 5 5 chr5 19745431 19745619 -179884531 - L1MB3 LINE L1 -10 6173 5986 1646 178 28 0 chr5 19745753 19746040 -179884110 + AluJb SINE Alu 1 295 -17 1430 189 88 1 chr5 19746655 19746957 -179883193 + L1MB2 LINE L1 5837 6164 -7 2709 67 32 3 chr5 19747042 19747387 -179882763 - THE1A LTR MaLR 0 355 1 11550 92 10 19 chr5 19747387 19748473 -179881677 - THE1A-int LTR MaLR 0 1580 511 2255 83 0 0 chr5 19748473 19748763 -179881387 + AluY SINE Alu 1 290 -21 11550 92 10 19 chr5 19748763 19749270 -179880880 - THE1A-int LTR MaLR -1069 511 1 2518 58 92 0 chr5 19749270 19749595 -179880555 - THE1A LTR MaLR 0 355 1 1800 127 0 18 chr5 19750282 19750565 -179879585 + AluSx SINE Alu 35 312 0 1984 127 0 0 chr5 19750985 19751277 -179878873 - AluSx SINE Alu -20 292 1 1630 184 46 23 chr5 19751281 19751629 -179878521 + MLT1A1 LTR MaLR 10 365 0 436 246 109 0 chr5 19752425 19752563 -179877587 - MIR SINE MIR -95 167 15 2442 104 3 6 chr5 19753059 19753415 -179876735 + L1PB2 LINE L1 5797 6151 0 209 248 137 18 chr5 19753958 19754084 -179876066 - MIR SINE MIR -57 151 5 1894 152 3 7 chr5 19754318 19754628 -179875522 + AluSx SINE Alu 1 309 -3 1981 243 80 19 chr5 19756680 19757323 -179872827 + L1ME1 LINE L1 5465 6160 -6 2461 69 0 0 chr5 19757333 19757638 -179872512 - AluY SINE Alu -6 305 1 240 183 256 0 chr5 19758013 19758095 -179872055 + MER58B DNA MER1_type 202 304 -37 1497 172 37 17 chr5 19758537 19758834 -179871316 + AluJb SINE Alu 6 308 -4 334 155 52 0 chr5 19759214 19759272 -179870878 - MER20 DNA MER1_type -4 215 155 2098 116 3 3 chr5 19759814 19760117 -179870033 + AluSx SINE Alu 1 303 -9 2024 136 0 0 chr5 19761074 19761384 -179868766 + AluSx SINE Alu 1 310 -2 2058 132 0 0 chr5 19761911 19762214 -179867936 - AluSx SINE Alu -9 303 1 224 282 13 0 chr5 19762510 19762588 -179867562 + (TCCA)n Simple_repeat Simple_repeat 3 81 0 1329 178 60 57 chr5 19762670 19762815 -179867335 + AluJo SINE Alu 1 144 -158 1570 109 5 0 chr5 19762815 19763035 -179867115 + AluSp SINE Alu 79 299 -14 1329 178 60 57 chr5 19763035 19763187 -179866963 + AluJo SINE Alu 144 299 -3 1869 155 0 16 chr5 19763312 19763628 -179866522 + AluJb SINE Alu 1 311 -1 1420 112 0 0 chr5 19763628 19763824 -179866326 + AluSg/x SINE Alu 85 280 -32 546 141 8 25 chr5 19763846 19763967 -179866183 + GA-rich Low_complexity Low_complexity 2 120 0 2710 164 36 17 chr5 19764609 19764955 -179865195 + L1MB8 LINE L1 5472 5810 -368 2111 117 0 0 chr5 19764955 19765254 -179864896 + AluSx SINE Alu 6 304 -8 2710 164 36 17 chr5 19765254 19765393 -179864757 + L1MB8 LINE L1 5810 5915 -263 1351 159 3 111 chr5 19765393 19765726 -179864424 + AluSx SINE Alu 1 297 -5 2710 164 36 17 chr5 19765726 19765778 -179864372 + L1MB8 LINE L1 5915 5965 -213 1126 160 9 41 chr5 19765800 19766019 -179864131 + L1MB7 LINE L1 5953 6164 -20 199 313 0 0 chr5 19766411 19766459 -179863691 + L2 LINE L2 3229 3276 -37 1616 180 0 7 chr5 19766735 19767040 -179863110 + AluSx SINE Alu 2 304 -8 2533 51 0 6 chr5 19767289 19767602 -179862548 + AluY SINE Alu 1 311 0 2090 125 3 3 chr5 19767743 19768048 -179862102 + AluSx SINE Alu 2 306 -6 1131 220 52 12 chr5 19768389 19768769 -179861381 - L1MC3 LINE L1 -7 7778 7349 484 274 64 32 chr5 19768786 19768943 -179861207 + MIR SINE MIR 35 196 -66 198 0 0 0 chr5 19770144 19770166 -179859984 + (CA)n Simple_repeat Simple_repeat 2 23 0 697 176 0 0 chr5 19770551 19770659 -179859491 + FLAM_C SINE Alu 13 120 -23 2044 127 10 0 chr5 19770676 19770983 -179859167 + AluSx SINE Alu 1 310 -2 350 188 27 9 chr5 19771291 19771403 -179858747 + GA-rich Low_complexity Low_complexity 3 116 0 198 0 0 0 chr5 19771665 19771687 -179858463 + (A)n Simple_repeat Simple_repeat 1 22 0 813 159 32 16 chr5 19772571 19772760 -179857390 - Charlie5 DNA MER1_type -41 2571 2380 1900 107 16 23 chr5 19772771 19773081 -179857069 - AluSq SINE Alu -3 310 3 1902 151 3 3 chr5 19774318 19774622 -179855528 + AluSx SINE Alu 1 304 -8 2041 135 0 0 chr5 19775579 19775890 -179854260 + AluSx SINE Alu 1 311 -1 2009 139 0 0 chr5 19776417 19776720 -179853430 - AluSx SINE Alu -9 303 1 224 282 13 0 chr5 19777016 19777094 -179853056 + (TCCA)n Simple_repeat Simple_repeat 3 81 0 1329 178 60 57 chr5 19777176 19777321 -179852829 + AluJo SINE Alu 1 144 -158 1570 109 5 0 chr5 19777321 19777541 -179852609 + AluSp SINE Alu 79 299 -14 1329 178 60 57 chr5 19777541 19777693 -179852457 + AluJo SINE Alu 144 299 -3 1842 154 0 25 chr5 19777818 19778137 -179852013 + AluJb SINE Alu 1 311 -1 1403 124 10 0 chr5 19778138 19778347 -179851803 + AluSg/x SINE Alu 84 294 -16 774 127 13 7 chr5 19778355 19778505 -179851645 + GA-rich Low_complexity Low_complexity 2 152 0 2728 165 35 17 chr5 19779149 19779495 -179850655 + L1MB8 LINE L1 5472 5810 -368 2111 117 0 0 chr5 19779495 19779794 -179850356 + AluSx SINE Alu 6 304 -8 2728 165 35 17 chr5 19779794 19779933 -179850217 + L1MB8 LINE L1 5810 5910 -268 1680 146 7 45 chr5 19779933 19780242 -179849908 + AluSx SINE Alu 1 297 -15 2728 165 35 17 chr5 19780242 19780300 -179849850 + L1MB8 LINE L1 5910 5965 -213 1126 160 9 41 chr5 19780317 19780536 -179849614 + L1MB7 LINE L1 5953 6164 -20 199 313 0 0 chr5 19780928 19780976 -179849174 + L2 LINE L2 3229 3276 -37 1616 180 0 7 chr5 19781252 19781557 -179848593 + AluSx SINE Alu 2 304 -8 2425 62 0 7 chr5 19781806 19782113 -179848037 + AluY SINE Alu 1 305 -6 2043 127 3 7 chr5 19782247 19782554 -179847596 + AluSx SINE Alu 2 307 -5 1131 220 52 12 chr5 19782895 19783275 -179846875 - L1MC3 LINE L1 -7 7778 7349 417 310 51 25 chr5 19783291 19783449 -179846701 + MIR SINE MIR 35 196 -66 414 0 0 0 chr5 19784647 19784693 -179845457 + (CA)n Simple_repeat Simple_repeat 2 47 0 697 176 0 0 chr5 19785078 19785186 -179844964 + FLAM_C SINE Alu 13 120 -23 2056 124 10 0 chr5 19785203 19785510 -179844640 + AluSx SINE Alu 1 310 -2 350 188 27 9 chr5 19785818 19785930 -179844220 + GA-rich Low_complexity Low_complexity 3 116 0 1123 202 22 45 chr5 19787098 19787297 -179842853 - MER33 DNA MER1_type -2275 310 119 2291 85 13 0 chr5 19787297 19787602 -179842548 - AluSq SINE Alu -4 309 1 1123 202 22 45 chr5 19787602 19787714 -179842436 - MER33 DNA MER1_type -2466 119 6 2035 86 39 0 chr5 19787767 19788047 -179842103 + AluSx SINE Alu 11 301 -11 1901 110 30 7 chr5 19788246 19788546 -179841604 + AluSq SINE Alu 1 307 -6 2120 120 0 0 chr5 19788610 19788919 -179841231 + AluSx SINE Alu 1 309 -3 2038 111 31 0 chr5 19789636 19789925 -179840225 - AluSx SINE Alu -14 298 1 1017 130 65 16 chr5 19790936 19791121 -179839029 - AluSq SINE Alu 0 313 120 903 97 60 8 chr5 19791560 19791694 -179838456 - AluSq SINE Alu -170 143 3 226 217 17 17 chr5 19791757 19791817 -179838333 - L2 LINE L2 0 3313 3254 510 252 31 117 chr5 19791904 19792023 -179838127 - MIR SINE MIR 0 262 169 2070 84 7 14 chr5 19792023 19792308 -179837842 + AluSg SINE Alu 3 285 -25 510 252 31 117 chr5 19792308 19792410 -179837740 - MIR SINE MIR -93 169 60 2788 209 49 17 chr5 19792798 19793543 -179836607 + MER21B LTR ERV1 1 816 -47 2360 58 0 0 chr5 19793543 19793836 -179836314 + AluY SINE Alu 1 293 -18 2788 209 49 17 chr5 19793836 19793865 -179836285 + MER21B LTR ERV1 816 843 -20 194 0 39 0 chr5 19794427 19794453 -179835697 + (CAGC)n Simple_repeat Simple_repeat 1 27 0 678 222 151 5 chr5 19795211 19795396 -179834754 - MER20 DNA MER1_type -5 214 3 2236 102 0 6 chr5 19795725 19796039 -179834111 + AluSx SINE Alu 1 312 0 202 297 81 27 chr5 19796140 19796214 -179833936 - MIR SINE MIR -183 79 2 1876 125 7 14 chr5 19796847 19797135 -179833015 + AluSx SINE Alu 1 286 -26 1986 109 36 0 chr5 19797142 19797440 -179832710 + AluSx SINE Alu 1 308 0 1284 160 15 0 chr5 19797692 19797898 -179832252 + L1MB5 LINE L1 5819 6027 -147 2477 107 3 50 chr5 19797912 19798123 -179832027 - THE1B LTR MaLR 0 364 177 2029 104 7 3 chr5 19798123 19798420 -179831730 + AluSg SINE Alu 1 298 -12 2477 107 3 50 chr5 19798420 19798590 -179831560 - THE1B LTR MaLR -187 177 1 2357 162 29 5 chr5 19798599 19799007 -179831143 + MSTB1 LTR MaLR 15 432 0 611 203 55 3 chr5 19799010 19799165 -179830985 + L1MB5 LINE L1 6022 6184 0 263 286 58 56 chr5 19799215 19799337 -179830813 - MIR SINE MIR -78 130 28 233 277 118 8 chr5 19799344 19799463 -179830687 + MIR SINE MIR 130 261 -1 620 295 34 54 chr5 19799494 19799757 -179830393 - MIR SINE MIR -5 257 3 476 183 0 0 chr5 19799961 19800043 -179830107 + FLAM SINE Alu 45 126 -17 1154 84 168 45 chr5 19800261 19800348 -179829802 - MER30 DNA MER1_type 0 230 155 1762 169 3 0 chr5 19800348 19800650 -179829500 + AluJb SINE Alu 2 304 -8 2275 79 10 0 chr5 19800652 19800944 -179829206 + AluSq SINE Alu 1 295 -18 198 0 0 0 chr5 19800949 19800971 -179829179 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1154 84 168 45 chr5 19800971 19801076 -179829074 - MER30 DNA MER1_type -78 152 4 486 230 40 40 chr5 19801093 19801245 -179828905 + Charlie8 DNA MER1_type 28 179 -2238 459 0 0 0 chr5 19801699 19801750 -179828400 + (CA)n Simple_repeat Simple_repeat 1 51 0 254 294 37 28 chr5 19803912 19804021 -179826129 + MIR3 SINE MIR 65 174 -34 2200 102 0 3 chr5 19804573 19804878 -179825272 + AluSx SINE Alu 1 304 -8 216 0 0 0 chr5 19805305 19805329 -179824821 + (A)n Simple_repeat Simple_repeat 1 24 0 1036 210 19 5 chr5 19806234 19806448 -179823702 - MER20 DNA MER1_type 0 219 3 1240 185 3 70 chr5 19806472 19806785 -179823365 + AluJo SINE Alu 1 292 -20 2401 84 6 0 chr5 19807392 19807703 -179822447 - AluSp SINE Alu 0 313 1 180 274 73 48 chr5 19807872 19807996 -179822154 - L3 LINE CR1 -155 1422 1296 2063 125 0 3 chr5 19807997 19808308 -179821842 + AluSx SINE Alu 1 310 -2 798 294 9 5 chr5 19808346 19808560 -179821590 + MIR SINE MIR 34 248 -14 2042 127 0 13 chr5 19808597 19808733 -179821417 + AluSx SINE Alu 1 137 -175 2177 109 0 0 chr5 19808733 19809027 -179821123 + AluSc SINE Alu 1 294 -15 2042 127 0 13 chr5 19809027 19809205 -179820945 + AluSx SINE Alu 137 311 -1 1492 243 120 24 chr5 19809220 19809725 -179820425 + L1MD3 LINE L1 5791 7977 -18 2104 92 3 3 chr5 19809738 19810065 -179820085 + AluSx SINE Alu 1 327 0 213 121 0 0 chr5 19810530 19810563 -179819587 + (A)n Simple_repeat Simple_repeat 1 33 0 726 178 64 99 chr5 19810640 19810842 -179819308 + MER20 DNA MER1_type 1 195 -24 2226 88 3 0 chr5 19810845 19811141 -179819009 + AluSx SINE Alu 1 297 -15 1849 168 0 0 chr5 19811661 19811970 -179818180 + AluJb SINE Alu 1 309 -3 2338 64 3 3 chr5 19812203 19812499 -179817651 - AluY SINE Alu -15 296 1 303 71 0 0 chr5 19812566 19812608 -179817542 + (CA)n Simple_repeat Simple_repeat 2 43 0 1694 186 0 0 chr5 19812723 19813024 -179817126 + AluJo SINE Alu 1 301 -11 363 228 124 41 chr5 19813405 19813550 -179816600 + L1ME LINE L1 5600 5756 -365 1396 198 98 76 chr5 19813639 19813746 -179816404 + Zaphod DNA AcHobo 2786 2889 -1142 2458 60 0 3 chr5 19813746 19814048 -179816102 - AluY SINE Alu -10 301 1 1396 198 98 76 chr5 19814048 19814384 -179815766 + Zaphod DNA AcHobo 2889 3246 -785 1825 94 0 4 chr5 19814384 19814629 -179815521 - AluSq SINE Alu -69 244 1 1396 198 98 76 chr5 19814629 19814736 -179815414 + Zaphod DNA AcHobo 3246 3349 -682 631 168 154 0 chr5 19814749 19814892 -179815258 - MER46A DNA MER2_type -9 227 63 638 209 87 15 chr5 19814892 19815088 -179815062 + L1MA4 LINE L1 6086 6295 -5 356 180 0 0 chr5 19815098 19815159 -179814991 - MER46A DNA MER2_type -175 61 1 1952 206 136 22 chr5 19815160 19815337 -179814813 + Zaphod DNA AcHobo 3349 3504 -527 1846 165 0 0 chr5 19815337 19815640 -179814510 + AluSx SINE Alu 1 303 -9 1952 206 136 22 chr5 19815640 19816064 -179814086 + Zaphod DNA AcHobo 3504 4019 -12 2242 73 0 0 chr5 19816222 19816539 -179813611 - AluY SINE Alu 0 311 1 22 35 0 0 chr5 19817098 19817127 -179813023 + AT_rich Low_complexity Low_complexity 1 29 0 1713 97 58 0 chr5 19817136 19817394 -179812756 - AluSx SINE Alu -25 287 15 2091 118 0 0 chr5 19817479 19817784 -179812366 + AluY SINE Alu 1 305 -6 2456 50 0 3 chr5 19817867 19818170 -179811980 - AluY SINE Alu -9 302 1 1067 219 13 17 chr5 19818368 19818606 -179811544 + MIR SINE MIR 1 237 -25 389 215 0 0 chr5 19818608 19818673 -179811477 + MER2 DNA MER2_type 1 65 -280 * 637 127 85 42 chr5 19818668 19818786 -179811364 + MER2 DNA MER2_type 223 345 0 187 293 181 17 chr5 19819564 19819680 -179810470 - MIR SINE MIR -15 247 113 2237 78 3 0 chr5 19819907 19820223 -179809927 + AluSp SINE Alu 1 317 0 252 210 16 48 chr5 19821250 19821312 -179808838 - L2 LINE L2 -18 3295 3236 1431 137 125 0 chr5 19821715 19821971 -179808179 - AluJb SINE Alu -24 288 1 916 205 95 0 chr5 19822065 19822265 -179807885 + MER20 DNA MER1_type 1 219 0 195 281 37 37 chr5 19822889 19822971 -179807179 + MIR3 SINE MIR 93 174 -34 30 0 0 0 chr5 19824381 19824411 -179805739 + GC_rich Low_complexity Low_complexity 1 30 0 279 217 0 89 chr5 19825214 19825371 -179804779 + (CCCCG)n Simple_repeat Simple_repeat 1 143 0 188 294 118 0 chr5 19826189 19826257 -179803893 + MER5C DNA MER1_type 248 323 -1 225 159 0 101 chr5 19826270 19826339 -179803811 + L2 LINE L2 2989 3050 -222 926 146 35 12 chr5 19826955 19827126 -179803024 + L1MC2 LINE L1 6168 6342 -2 348 247 94 47 chr5 19829523 19829608 -179800542 + MER45A DNA AcHobo 1 89 -89 1937 110 0 0 chr5 19829714 19829978 -179800172 - AluSg SINE Alu -45 265 2 2190 90 0 10 chr5 19829980 19830281 -179799869 - AluSg SINE Alu -12 298 1 401 290 94 7 chr5 19830285 19830423 -179799727 - MIR SINE MIR -56 206 57 201 373 0 15 chr5 19830466 19830533 -179799617 - MIR SINE MIR -194 68 3 720 186 8 0 chr5 19830609 19830733 -179799417 + FLAM_C SINE Alu 2 126 -17 1845 145 33 0 chr5 19830786 19831089 -179799061 - AluSp SINE Alu 0 313 1 2447 26 3 16 chr5 19831190 19831500 -179798650 - AluY SINE Alu -5 306 1 2009 118 3 7 chr5 19831508 19831813 -179798337 - AluSq SINE Alu -9 304 1 641 159 0 19 chr5 19831841 19831948 -179798202 - U6 snRNA snRNA -2 105 1 610 193 0 9 chr5 19831972 19832081 -179798069 - FRAM SINE Alu -61 115 8 2186 106 0 10 chr5 19832095 19832406 -179797744 - AluSx SINE Alu -4 308 1 401 206 0 0 chr5 19832409 19832482 -179797668 + MER45A DNA AcHobo 102 174 -4 1562 153 42 39 chr5 19832713 19833021 -179797129 + AluJo SINE Alu 1 309 -3 200 151 0 38 chr5 19833460 19833513 -179796637 + A-rich Low_complexity Low_complexity 3 53 0 1867 121 13 16 chr5 19833808 19834089 -179796061 + AluSq SINE Alu 1 282 -31 1103 42 0 7 chr5 19834089 19834231 -179795919 + (GGAA)n Simple_repeat Simple_repeat 4 144 0 1867 121 13 16 chr5 19834231 19834263 -179795887 + AluSq SINE Alu 282 313 0 282 288 0 0 chr5 19834271 19834351 -179795799 + L1MC/D LINE L1 5722 5801 -2007 350 273 224 47 chr5 19834354 19834722 -179795428 - MLT1H LTR MaLR 0 549 101 1447 153 113 11 chr5 19834722 19834996 -179795154 - AluSx SINE Alu -10 302 1 350 273 224 47 chr5 19834996 19835033 -179795117 - MLT1H LTR MaLR -448 101 72 1752 181 62 8 chr5 19835062 19835416 -179794734 - L1MB5 LINE L1 -13 6161 5789 904 151 87 6 chr5 19835432 19835604 -179794546 - MER30 DNA MER1_type -44 186 1 1334 131 100 0 chr5 19835604 19835833 -179794317 - L1MB5 LINE L1 -378 5796 5545 1266 66 52 104 chr5 19835965 19836036 -179794114 + AluSg/x SINE Alu 84 157 -156 2041 121 3 3 chr5 19836036 19836342 -179793808 + AluSx SINE Alu 1 306 -6 1266 66 52 104 chr5 19836342 19836511 -179793639 + AluSg/x SINE Alu 157 313 0 824 145 7 29 chr5 19836561 19836699 -179793451 + AluJo SINE Alu 2 136 -176 2166 141 126 8 chr5 19836705 19837087 -179793063 + MSTA LTR MaLR 2 428 0 431 152 13 38 chr5 19837282 19837361 -179792789 + THE1C LTR MaLR 299 375 0 1550 131 11 69 chr5 19837361 19837636 -179792514 + MLT1B LTR MaLR 132 390 0 322 414 57 5 chr5 19837636 19837846 -179792304 - L2 LINE L2 -214 3058 2838 441 271 47 0 chr5 19837890 19837997 -179792153 + MER63 DNA MER1_type 2 739 -323 2261 89 0 16 chr5 19838000 19838315 -179791835 - AluY SINE Alu -1 310 1 983 195 4 17 chr5 19838673 19838904 -179791246 - AluJb SINE Alu 0 312 85 1338 96 216 24 chr5 19838904 19839154 -179790996 - AluSg1 SINE Alu -7 302 5 453 243 77 163 chr5 19839193 19839531 -179790619 + L2 LINE L2 2834 3199 -114 785 267 42 9 chr5 19839531 19839748 -179790402 + MER58A DNA MER1_type 1 224 0 453 243 77 163 chr5 19839748 19839773 -179790377 + L2 LINE L2 3199 3225 -88 1746 130 102 128 chr5 19839773 19839948 -179790202 + MSTA LTR MaLR 1 179 -249 1977 121 0 0 chr5 19839948 19840229 -179789921 + AluSg SINE Alu 1 281 -29 1746 130 102 128 chr5 19840229 19840256 -179789894 + MSTA LTR MaLR 179 205 -223 2119 105 0 3 chr5 19840256 19840552 -179789598 + AluSx SINE Alu 1 295 -17 1746 130 102 128 chr5 19840552 19840720 -179789430 + MSTA LTR MaLR 205 362 -66 2215 100 0 7 chr5 19840720 19841029 -179789121 + AluSx SINE Alu 1 307 -5 1746 130 102 128 chr5 19841029 19841095 -179789055 + MSTA LTR MaLR 362 428 0 453 243 77 163 chr5 19841095 19841208 -179788942 + L2 LINE L2 3225 3270 -43 2409 52 0 10 chr5 19841239 19841547 -179788603 + AluY SINE Alu 1 305 -6 311 363 0 0 chr5 19841651 19841742 -179788408 + L1MC4 LINE L1 6613 6703 -1339 388 159 14 14 chr5 19841771 19841840 -179788310 - FRAM SINE Alu -29 137 69 1215 114 0 47 chr5 19842828 19843064 -179787086 - AluSx SINE Alu -87 225 1 247 293 25 83 chr5 19843095 19843134 -179787016 - MIR SINE MIR -32 230 190 2452 52 0 3 chr5 19843134 19843443 -179786707 - AluY SINE Alu -3 308 1 247 293 25 83 chr5 19843443 19843560 -179786590 - MIR SINE MIR -72 190 83 349 250 235 50 chr5 19843632 19843832 -179786318 + MIR SINE MIR 20 256 -6 1204 179 93 7 chr5 19843835 19844115 -179786035 + AluJo SINE Alu 1 304 -8 28 0 0 0 chr5 19844811 19844839 -179785311 + AT_rich Low_complexity Low_complexity 1 28 0 1807 124 7 0 chr5 19845016 19845291 -179784859 + AluSx SINE Alu 34 310 -2 1538 151 134 35 chr5 19845312 19845387 -179784763 + L1MD3 LINE L1 6264 6330 -1665 2116 100 28 0 chr5 19845387 19845678 -179784472 + AluSc SINE Alu 1 299 -10 1538 151 134 35 chr5 19845678 19845963 -179784187 + L1MD3 LINE L1 6330 7995 0 300 300 53 53 chr5 19846072 19846242 -179783908 + L1MEd LINE L1 307 476 -5643 1582 178 0 4 chr5 19846271 19846552 -179783598 - AluJo SINE Alu -12 300 21 1810 172 0 104 chr5 19846600 19846786 -179783364 + MLT1B LTR MaLR 1 118 -272 2022 130 0 0 chr5 19846786 19847079 -179783071 + AluSg SINE Alu 1 293 -17 1810 172 0 104 chr5 19847079 19847323 -179782827 + MLT1B LTR MaLR 118 386 -4 21 36 0 0 chr5 19847364 19847392 -179782758 + AT_rich Low_complexity Low_complexity 1 28 0 251 192 121 61 chr5 19847496 19847595 -179782555 - MLT1J LTR MaLR -33 478 374 595 277 55 82 chr5 19847629 19847788 -179782362 - L2 LINE L2 -1459 1855 1708 1987 118 3 3 chr5 19847788 19848085 -179782065 + AluSx SINE Alu 1 297 -15 595 277 55 82 chr5 19848085 19848253 -179781897 - L2 LINE L2 -1606 1708 1537 253 231 0 0 chr5 19848307 19848359 -179781791 + LTR30 LTR ERV1 1 52 -670 2550 131 81 2 chr5 19848359 19848756 -179781394 + LTR12 LTR ERV1 53 480 -234 559 272 125 66 chr5 19848795 19849024 -179781126 + MER69 DNA AcHobo 32 246 -980 2037 152 75 15 chr5 19849024 19849413 -179780737 - MLT2D LTR ERVL 0 414 3 1868 141 10 0 chr5 19849414 19849704 -179780446 + AluJb SINE Alu 1 293 -19 559 272 125 66 chr5 19849704 19849746 -179780404 + MER69 DNA AcHobo 246 284 -942 1940 89 0 41 chr5 19849746 19850081 -179780069 - AluSg SINE Alu 0 323 1 1560 191 0 10 chr5 19850086 19850380 -179779770 - AluJb SINE Alu -21 291 1 559 272 125 66 chr5 19850380 19850506 -179779644 + MER69 DNA AcHobo 287 463 -763 686 126 0 0 chr5 19850516 19850611 -179779539 + AluJb SINE Alu 201 295 -17 2178 98 7 0 chr5 19850611 19850917 -179779233 + AluSc SINE Alu 1 308 -1 2459 39 3 26 chr5 19850969 19851279 -179778871 + AluY SINE Alu 1 303 -8 23 33 0 0 chr5 19851280 19851310 -179778840 + AT_rich Low_complexity Low_complexity 1 30 0 1619 207 139 20 chr5 19851391 19851850 -179778300 + MER69 DNA AcHobo 2010 2523 -3 1915 143 27 0 chr5 19851978 19852279 -179777871 - AluJb SINE Alu -3 309 1 595 135 0 29 chr5 19852450 19852554 -179777596 + MER53 DNA DNA 1 101 -88 2286 74 3 3 chr5 19852584 19852883 -179777267 - AluSg SINE Alu -10 300 2 32 0 0 0 chr5 19853089 19853121 -179777029 + AT_rich Low_complexity Low_complexity 1 32 0 1890 107 50 0 chr5 19853126 19853406 -179776744 + AluSg SINE Alu 3 296 -14 713 130 0 0 chr5 19853444 19853544 -179776606 - AluJ/FLAM SINE Alu -211 101 2 2490 194 104 75 chr5 19853789 19854415 -179775735 + MER45B DNA AcHobo 1 607 -433 2179 123 39 28 chr5 19854415 19854773 -179775377 + THE1B LTR MaLR 1 362 -2 2490 194 104 75 chr5 19854773 19854803 -179775347 + MER45B DNA AcHobo 607 635 -405 1443 208 7 10 chr5 19854803 19855092 -179775058 - AluJo SINE Alu -24 288 1 2490 194 104 75 chr5 19855092 19855191 -179774959 + MER45B DNA AcHobo 635 779 -261 239 93 70 0 chr5 19855199 19855242 -179774908 + MER45B DNA AcHobo 734 779 -261 357 109 0 0 chr5 19855242 19855297 -179774853 + (TTCCC)n Simple_repeat Simple_repeat 4 58 0 1539 97 0 0 chr5 19855298 19855505 -179774645 - AluSq SINE Alu -95 218 12 574 110 0 44 chr5 19855563 19855654 -179774496 + AluSc SINE Alu 210 296 -13 939 66 0 0 chr5 19855666 19855787 -179774363 - AluY SINE Alu -16 295 175 1039 183 10 14 chr5 19855787 19855995 -179774155 + MER45B DNA AcHobo 834 1040 0 389 273 67 62 chr5 19857128 19857176 -179772974 - MIR SINE MIR -11 251 205 2186 105 0 0 chr5 19857176 19857471 -179772679 - AluSg SINE Alu -14 296 2 2198 89 0 10 chr5 19857473 19857775 -179772375 - AluSg SINE Alu -11 299 1 389 273 67 62 chr5 19857775 19857917 -179772233 - MIR SINE MIR -57 205 57 201 373 0 15 chr5 19857960 19858027 -179772123 - MIR SINE MIR -194 68 3 720 186 8 0 chr5 19858097 19858221 -179771929 + FLAM_C SINE Alu 2 126 -17 1815 148 33 0 chr5 19858274 19858577 -179771573 - AluSp SINE Alu 0 313 1 2325 68 0 3 chr5 19858678 19858985 -179771165 - AluSg SINE Alu -4 306 1 183 374 86 16 chr5 19859020 19859207 -179770943 - L3 LINE CR1 -1164 413 214 1467 203 0 7 chr5 19859247 19859543 -179770607 + AluSx SINE Alu 1 294 -18 939 108 51 6 chr5 19859548 19859705 -179770445 - AluY SINE Alu -19 292 129 2136 70 13 46 chr5 19860093 19860395 -179769755 + AluY SINE Alu 1 292 -19 1467 203 0 7 chr5 19860400 19860696 -179769454 - AluSx SINE Alu -18 294 1 183 374 86 16 chr5 19860736 19860923 -179769227 + L3 LINE CR1 214 413 -1164 2065 114 0 3 chr5 19860958 19861256 -179768894 + AluSg SINE Alu 1 297 -13 379 133 0 0 chr5 19861424 19861489 -179768661 + Alu SINE Alu 1 46 -255 2239 75 3 36 chr5 19861516 19861823 -179768327 + AluSp SINE Alu 1 297 -16 1877 108 32 4 chr5 19861835 19862114 -179768036 + AluSc SINE Alu 1 287 -22 632 197 210 108 chr5 19862137 19862508 -179767642 - MLT1I LTR MaLR 0 409 1 265 330 21 10 chr5 19862522 19862619 -179767531 + L3 LINE CR1 885 982 -595 975 179 31 20 chr5 19862632 19862827 -179767323 + MLT1D LTR MaLR 1 197 -308 947 153 7 0 chr5 19862858 19863008 -179767142 + MLT1D LTR MaLR 355 505 0 1509 164 54 11 chr5 19863013 19863293 -179766857 - AluJo SINE Alu -20 292 1 2109 102 14 0 chr5 19863323 19863618 -179766532 + AluSp SINE Alu 1 299 -14 533 298 193 12 chr5 19863670 19863996 -179766154 + L3 LINE CR1 1169 1553 -24 2541 3 0 0 chr5 19864340 19864653 -179765497 - AluY SINE Alu 0 313 1 688 170 7 64 chr5 19864687 19864828 -179765322 - FLAM_C SINE Alu 0 133 1 1614 108 0 0 chr5 19865009 19865232 -179764918 - AluSq SINE Alu -90 223 1 259 43 22 22 chr5 19865244 19865290 -179764860 + (CA)n Simple_repeat Simple_repeat 1 46 0 2022 104 7 14 chr5 19865293 19865582 -179764568 - AluSg SINE Alu -23 287 1 220 121 0 0 chr5 19865726 19865759 -179764391 - MER5A DNA MER1_type -19 170 138 1585 143 14 29 chr5 19865973 19866253 -179763897 - AluJo SINE Alu -36 276 1 392 275 93 103 chr5 19866280 19866571 -179763579 + L2 LINE L2 2183 2470 -844 1661 144 4 0 chr5 19866782 19867038 -179763112 - AluSx SINE Alu -18 294 38 655 131 49 33 chr5 19867290 19867412 -179762738 + MLT1A1 LTR MaLR 1 124 -241 612 161 18 17 chr5 19867423 19867540 -179762610 + MLT1A1 LTR MaLR 250 354 -11 1920 139 0 0 chr5 19867542 19867855 -179762295 + AluSx SINE Alu 1 313 0 1515 176 10 17 chr5 19867972 19868273 -179761877 + AluJo SINE Alu 1 299 -13 243 265 161 108 chr5 19869084 19869151 -179760999 - MIR SINE MIR 0 262 200 2290 78 0 10 chr5 19869151 19869460 -179760690 - AluY SINE Alu -5 306 1 243 265 161 108 chr5 19869460 19869488 -179760662 - MIR SINE MIR -62 200 175 2341 77 0 6 chr5 19869488 19869801 -179760349 - AluY SINE Alu 0 311 1 243 265 161 108 chr5 19869801 19869953 -179760197 - MIR SINE MIR -87 175 1 268 330 88 21 chr5 19870185 19870424 -179759726 + HAL1b LINE L1 89 343 -1005 253 133 50 17 chr5 19870448 19870508 -179759642 + CT-rich Low_complexity Low_complexity 2 63 0 297 197 0 0 chr5 19870588 19870649 -179759501 + CT-rich Low_complexity Low_complexity 1 61 0 898 185 0 22 chr5 19870649 19870827 -179759323 - AluJb SINE Alu -6 306 133 2184 94 3 3 chr5 19870836 19871144 -179759006 - AluY SINE Alu -3 308 1 482 217 80 7 chr5 19871155 19871293 -179758857 + HAL1b LINE L1 419 566 -782 289 167 30 121 chr5 19871303 19871359 -179758791 + HAL1b LINE L1 694 753 -595 1625 151 19 45 chr5 19871359 19871497 -179758653 + AluSx SINE Alu 1 141 -171 2485 56 0 0 chr5 19871497 19871802 -179758348 + AluY SINE Alu 1 305 -6 1625 151 19 45 chr5 19871802 19871974 -179758176 + AluSx SINE Alu 141 303 -9 289 167 30 121 chr5 19871974 19872049 -179758101 + HAL1b LINE L1 753 813 -535 482 270 72 69 chr5 19872065 19872300 -179757850 + HAL1b LINE L1 1029 1267 -81 2295 70 0 20 chr5 19872300 19872600 -179757550 - AluY SINE Alu -17 294 1 482 270 72 69 chr5 19872600 19872682 -179757468 + HAL1b LINE L1 1267 1347 -1 1694 183 0 3 chr5 19872693 19873004 -179757146 + AluJo SINE Alu 1 310 -2 340 137 0 0 chr5 19873124 19873175 -179756975 + MER4E LTR ERV1 650 700 -66 309 89 0 0 chr5 19873177 19873222 -179756928 + (A)n Simple_repeat Simple_repeat 1 45 0 2488 33 0 13 chr5 19873443 19873743 -179756407 + AluY SINE Alu 1 296 -15 2090 109 3 0 chr5 19873950 19874253 -179755897 + AluSx SINE Alu 1 304 -8 414 0 0 0 chr5 19874400 19874446 -179755704 + (TG)n Simple_repeat Simple_repeat 2 47 0 1875 128 0 20 chr5 19874451 19874755 -179755395 - AluJb SINE Alu -14 298 1 823 0 63 0 chr5 19874830 19874957 -179755193 + (TA)n Simple_repeat Simple_repeat 2 136 0 2077 80 0 28 chr5 19875632 19875920 -179754230 + AluSc SINE Alu 16 295 -14 227 320 86 23 chr5 19876025 19876153 -179753997 - MER5A DNA MER1_type -7 182 47 * 303 324 38 9 chr5 19876049 19876154 -179753996 + MER5A DNA MER1_type 47 154 -35 304 271 226 0 chr5 19876249 19876382 -179753768 - MER5A DNA MER1_type -13 176 14 1713 141 20 17 chr5 19876413 19876710 -179753440 + AluSx SINE Alu 1 298 -14 5367 84 95 4 chr5 19876948 19877705 -179752445 - LTR12 LTR ERV1 0 826 1 779 267 20 0 chr5 19878357 19878552 -179751598 + MER58A DNA MER1_type 26 224 0 1624 187 0 3 chr5 19878834 19879123 -179751027 + AluJb SINE Alu 5 292 -20 230 132 19 0 chr5 19879123 19879176 -179750974 + (TA)n Simple_repeat Simple_repeat 1 54 0 317 294 42 34 chr5 19879380 19879499 -179750651 + MIR SINE MIR 84 203 -59 1801 162 0 22 chr5 19880248 19880562 -179749588 + AluJb SINE Alu 1 307 -5 198 0 0 0 chr5 19881456 19881478 -179748672 + (TG)n Simple_repeat Simple_repeat 1 22 0 2215 50 0 4 chr5 19881478 19881757 -179748393 - AluY SINE Alu -33 278 1 1088 214 13 17 chr5 19881955 19882193 -179747957 + MIR SINE MIR 1 237 -25 389 215 0 0 chr5 19882195 19882260 -179747890 + MER2 DNA MER2_type 1 65 -280 * 637 127 85 42 chr5 19882255 19882373 -179747777 + MER2 DNA MER2_type 223 345 0 200 293 181 17 chr5 19883151 19883267 -179746883 - MIR SINE MIR -15 247 113 2246 78 3 0 chr5 19883494 19883810 -179746340 + AluSp SINE Alu 1 317 0 252 210 16 48 chr5 19884839 19884901 -179745249 - L2 LINE L2 -18 3295 3236 1444 137 125 0 chr5 19885308 19885564 -179744586 - AluJb SINE Alu -24 288 1 916 205 95 0 chr5 19885658 19885858 -179744292 + MER20 DNA MER1_type 1 219 0 195 281 37 37 chr5 19886482 19886564 -179743586 + MIR3 SINE MIR 93 174 -34 30 0 0 0 chr5 19887973 19888003 -179742147 + GC_rich Low_complexity Low_complexity 1 30 0 279 217 0 89 chr5 19888806 19888963 -179741187 + (CCCCG)n Simple_repeat Simple_repeat 1 143 0 203 159 0 101 chr5 19889862 19889931 -179740219 + L2 LINE L2 2989 3050 -222 932 146 35 12 chr5 19890547 19890718 -179739432 + L1MC2 LINE L1 6168 6342 -2 407 242 117 62 chr5 19893115 19893243 -179736907 + MER45A DNA AcHobo 1 107 -71 1258 142 20 32 chr5 19893283 19893536 -179736614 + L1MA3 LINE L1 6056 6305 0 1364 59 71 0 chr5 19893547 19893717 -179736433 + AluY SINE Alu 2 183 -128 2287 66 0 11 chr5 19893723 19894009 -179736141 - AluY SINE Alu -28 283 1 2211 118 0 3 chr5 19894017 19894322 -179735828 - AluSq SINE Alu -9 304 1 646 159 0 19 chr5 19894350 19894457 -179735693 - U6 snRNA snRNA -2 105 1 619 204 0 0 chr5 19894481 19894589 -179735561 - FRAM SINE Alu -61 115 8 2314 106 0 10 chr5 19894603 19894914 -179735236 - AluSx SINE Alu -4 308 1 403 206 0 0 chr5 19894917 19894990 -179735160 + MER45A DNA AcHobo 102 174 -4 1675 153 42 39 chr5 19895221 19895529 -179734621 + AluJo SINE Alu 1 309 -3 200 151 0 38 chr5 19895968 19896021 -179734129 + A-rich Low_complexity Low_complexity 3 53 0 1937 103 14 14 chr5 19896316 19896597 -179733553 + AluSq SINE Alu 1 281 -32 1155 36 0 0 chr5 19896597 19896737 -179733413 + (GGAA)n Simple_repeat Simple_repeat 4 143 0 2464 58 0 19 chr5 19896891 19897202 -179732948 + AluY SINE Alu 1 305 -6 929 133 0 0 chr5 19897206 19897334 -179732816 - FLAM_C SINE Alu -10 133 6 1544 208 0 3 chr5 19897506 19897790 -179732360 + AluJo SINE Alu 17 299 -13 1466 158 43 84 chr5 19897792 19898114 -179732036 + AluJb SINE Alu 1 309 -3 1118 156 0 0 chr5 19898136 19898309 -179731841 + AluSg/x SINE Alu 135 307 -3 545 203 0 120 chr5 19898318 19898451 -179731699 - FLAM_A SINE Alu -12 121 5 2164 126 7 7 chr5 19898571 19898881 -179731269 + AluSx SINE Alu 1 310 -2 1376 187 79 4 chr5 19899195 19899313 -179730837 + Tigger7 DNA MER2_type 2288 2396 -191 2424 92 0 0 chr5 19899313 19899617 -179730533 - AluSx SINE Alu -8 304 1 1376 187 79 4 chr5 19899617 19899776 -179730374 + Tigger7 DNA MER2_type 2396 2586 -1 1515 66 0 11 chr5 19900357 19900538 -179729612 + AluY SINE Alu 1 179 -132 672 60 0 0 chr5 19900538 19900621 -179729529 + AluY SINE Alu 218 300 -11 1790 159 3 20 chr5 19900974 19901275 -179728875 - AluJo SINE Alu -11 301 6 1752 178 13 3 chr5 19901859 19902163 -179727987 - AluJb SINE Alu -5 307 1 1709 120 11 34 chr5 19902385 19902651 -179727499 + AluSq SINE Alu 1 260 -53 935 199 26 60 chr5 19902751 19902831 -179727319 + L1MC3 LINE L1 6790 6871 -914 2449 59 13 23 chr5 19902831 19903137 -179727013 + AluY SINE Alu 1 303 -8 935 199 26 60 chr5 19903137 19903322 -179726828 + L1MC3 LINE L1 6871 7046 -739 347 237 6 0 chr5 19903340 19903496 -179726654 + (TAGA)n Simple_repeat Simple_repeat 4 160 0 180 228 0 0 chr5 19903533 19903590 -179726560 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 403 155 48 128 chr5 19903594 19903765 -179726385 + L1MC1 LINE L1 6132 6315 -1454 2219 113 0 20 chr5 19903765 19904066 -179726084 + AluSg SINE Alu 1 295 -15 403 155 48 128 chr5 19904066 19904721 -179725429 + L1MC1 LINE L1 6315 7021 -748 2308 98 0 3 chr5 19904721 19905018 -179725132 - AluSq SINE Alu -17 296 1 403 155 48 128 chr5 19905018 19905038 -179725112 + L1MC1 LINE L1 7021 7769 0 194 301 157 12 chr5 19905421 19905504 -179724646 + MIR3 SINE MIR 83 177 -31 2201 95 14 0 chr5 19905508 19905793 -179724357 - AluSx SINE Alu -23 289 1 2326 77 0 45 chr5 19906039 19906349 -179723801 - AluY SINE Alu -15 296 1 185 56 0 56 chr5 19906398 19906434 -179723716 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 1087 192 63 120 chr5 19906592 19906952 -179723198 + LTR52 LTR ERVL 1 333 -88 1705 119 55 0 chr5 19906952 19907187 -179722963 + AluSx SINE Alu 33 280 -32 1087 192 63 120 chr5 19907187 19907269 -179722881 + LTR52 LTR ERVL 333 418 -3 2443 89 0 6 chr5 19908771 19909085 -179721065 - AluSq SINE Alu -1 312 1 21 0 0 0 chr5 19909476 19909497 -179720653 + AT_rich Low_complexity Low_complexity 1 21 0 1465 113 34 0 chr5 19909638 19909842 -179720308 + AluSg/x SINE Alu 96 306 -6 1181 248 77 57 chr5 19909887 19910307 -179719843 + L1MC5 LINE L1 7077 7516 -445 1632 157 44 31 chr5 19910307 19910600 -179719550 + AluJo SINE Alu 2 298 -14 1181 248 77 57 chr5 19910600 19910832 -179719318 + L1MC5 LINE L1 7516 7742 -219 625 275 59 13 chr5 19911302 19911538 -179718612 - MIR SINE MIR -1 261 15 2051 146 0 0 chr5 19911797 19912098 -179718052 - AluSx SINE Alu -3 309 9 665 170 64 38 chr5 19912796 19912987 -179717163 - L1MB3 LINE L1 -71 6103 5914 2276 67 42 0 chr5 19912988 19913272 -179716878 + AluY SINE Alu 1 296 -15 1654 142 40 0 chr5 19913394 19913641 -179716509 - AluSq SINE Alu -56 257 1 2376 94 0 3 chr5 19913641 19913948 -179716202 - AluSc SINE Alu -3 306 1 1971 143 6 22 chr5 19914081 19914395 -179715755 + AluJo SINE Alu 1 309 -3 2529 53 0 7 chr5 19914582 19914886 -179715264 - AluY SINE Alu -9 302 1 2318 91 3 58 chr5 19915287 19915517 -179714633 - L1PB1 LINE L1 0 6151 5947 2493 63 0 0 chr5 19915517 19915816 -179714334 - AluY SINE Alu -10 301 3 2318 91 3 58 chr5 19915816 19915948 -179714202 - L1PB1 LINE L1 -204 5947 5809 1312 157 0 5 chr5 19916027 19916231 -179713919 + AluJo SINE Alu 86 288 -24 1785 148 56 3 chr5 19918114 19918398 -179711752 - AluJo SINE Alu -13 299 1 2252 120 7 0 chr5 19918409 19918717 -179711433 - AluSx SINE Alu -2 310 1 212 309 0 56 chr5 19918946 19919072 -179711078 + CT-rich Low_complexity Low_complexity 4 122 0 2473 84 3 3 chr5 19919334 19919643 -179710507 + AluSx SINE Alu 1 309 -3 2060 97 57 17 chr5 19920451 19920750 -179709400 - AluSq SINE Alu -2 311 1 413 56 0 0 chr5 19920900 19920954 -179709196 - AluSp SINE Alu -17 296 243 894 191 4 49 chr5 19920954 19921179 -179708971 + pTR5 LTR ERV1 743 957 -1481 3781 126 40 30 chr5 19921279 19921940 -179708210 + pTR5 LTR ERV1 366 1019 -1419 1993 90 4 0 chr5 19921940 19922185 -179707965 - AluSp SINE Alu -67 246 1 2019 84 3 25 chr5 19922317 19922601 -179707549 + AluY SINE Alu 1 278 -33 198 0 0 0 chr5 19922601 19922623 -179707527 + (CA)n Simple_repeat Simple_repeat 1 22 0 1917 162 0 22 chr5 19923517 19923831 -179706319 - AluJb SINE Alu -5 307 1 269 294 42 34 chr5 19924580 19924699 -179705451 - MIR SINE MIR -59 203 84 211 130 37 0 chr5 19924903 19924957 -179705193 + (TA)n Simple_repeat Simple_repeat 1 56 0 1736 187 0 3 chr5 19924957 19925246 -179704904 - AluJb SINE Alu -20 292 5 707 228 41 0 chr5 19925527 19925698 -179704452 - MER58A DNA MER1_type 0 224 47 1549 182 12 49 chr5 19976186 19976510 -179653640 - AluJb SINE Alu 0 312 1 221 95 0 48 chr5 19976518 19976560 -179653590 + (TTTC)n Simple_repeat Simple_repeat 1 40 0 2045 117 17 3 chr5 19976571 19976862 -179653288 - AluSx SINE Alu -17 295 1 455 92 0 0 chr5 19977107 19977172 -179652978 + MER41B LTR ERV1 483 547 -88 231 211 132 13 chr5 19977292 19977368 -179652782 - L2 LINE L2 -1 3312 3228 2160 104 0 3 chr5 19977376 19977664 -179652486 - AluSx SINE Alu -12 300 14 631 242 163 8 chr5 19977771 19978108 -179652042 - L2 LINE L2 -249 3064 2673 442 261 78 58 chr5 19978680 19978937 -179651213 - MIR SINE MIR 0 262 1 2370 101 0 0 chr5 19979137 19979443 -179650707 - AluY SINE Alu -5 306 1 2319 104 3 0 chr5 19979889 19980197 -179649953 - AluSp SINE Alu -2 311 3 2127 133 0 3 chr5 19980197 19980497 -179649653 - AluJb SINE Alu -11 301 3 27 29 0 0 chr5 19980505 19980539 -179649611 + AT_rich Low_complexity Low_complexity 1 34 0 2270 104 7 3 chr5 19980957 19981256 -179648894 + AluSp SINE Alu 1 300 -13 2185 115 3 0 chr5 19981426 19981721 -179648429 - AluSx SINE Alu -16 296 1 29 0 0 0 chr5 19981929 19981958 -179648192 + AT_rich Low_complexity Low_complexity 1 29 0 29 70 0 0 chr5 19982007 19982064 -179648086 + AT_rich Low_complexity Low_complexity 1 57 0 947 87 109 0 chr5 19982240 19982378 -179647772 + AluSc SINE Alu 150 302 -7 22 35 0 0 chr5 19982704 19982733 -179647417 + AT_rich Low_complexity Low_complexity 1 29 0 257 188 31 0 chr5 19983667 19983731 -179646419 + CT-rich Low_complexity Low_complexity 3 68 0 2289 104 7 3 chr5 19983731 19984040 -179646110 - AluSx SINE Alu -2 310 1 277 211 0 0 chr5 19984498 19984550 -179645600 + LTR30 LTR ERV1 1 52 -670 1258 105 4 81 chr5 19984550 19984776 -179645374 + LTR12 LTR ERV1 94 284 -430 397 238 10 0 chr5 19984776 19984877 -179645273 + LTR30 LTR ERV1 552 653 -69 618 141 0 0 chr5 19984877 19984969 -179645181 + LTR12 LTR ERV1 623 714 0 957 192 0 6 chr5 19985061 19985228 -179644922 + FRAM SINE Alu 1 166 -10 2173 127 0 7 chr5 19985286 19985586 -179644564 + AluSq SINE Alu 1 298 -15 333 232 0 24 chr5 19986265 19986347 -179643803 - MIR3 SINE MIR -28 180 101 1220 183 46 13 chr5 19987167 19987463 -179642687 - LTR54 LTR ERV1 0 510 177 403 160 53 0 chr5 19987463 19987538 -179642612 - AluSc SINE Alu -143 166 88 361 240 41 25 chr5 19987538 19987659 -179642491 - LTR54B LTR ERV1 -375 123 1 1829 140 3 44 chr5 19988607 19988922 -179641228 + AluSx SINE Alu 1 302 -10 2308 91 0 0 chr5 19988959 19989268 -179640882 + AluY SINE Alu 1 309 -2 1953 125 3 16 chr5 19989363 19989666 -179640484 + AluSx SINE Alu 1 299 -13 822 83 18 0 chr5 19989737 19989846 -179640304 - HY1 scRNA scRNA -1 111 1 2147 114 0 3 chr5 19990333 19990639 -179639511 - AluSx SINE Alu -7 305 1 211 270 0 40 chr5 19991203 19991277 -179638873 + A-rich Low_complexity Low_complexity 4 74 0 2175 59 28 59 chr5 19991340 19991661 -179638489 + AluY SINE Alu 1 311 0 2069 94 3 24 chr5 19991726 19992024 -179638126 + AluSg SINE Alu 1 292 -18 447 284 80 12 chr5 19992921 19993083 -179637067 - MIR SINE MIR -22 240 68 242 325 51 38 chr5 19993153 19993310 -179636840 - L2 LINE L2 -613 2701 2543 1857 94 18 22 chr5 19993322 19993425 -179636725 + AluSq SINE Alu 33 135 -178 2218 75 0 0 chr5 19993425 19993740 -179636410 + AluY SINE Alu 1 315 0 1857 94 18 22 chr5 19993740 19993910 -179636240 + AluSq SINE Alu 135 307 -6 292 260 80 114 chr5 19994150 19994527 -179635623 + LTR16A1 LTR ERVL 2 365 -92 1875 146 37 89 chr5 19994528 19994872 -179635278 + MLT1B LTR MaLR 3 324 -66 1918 98 24 14 chr5 19994872 19995182 -179634968 - AluY SINE Alu 0 311 1 1875 146 37 89 chr5 19995182 19995241 -179634909 + MLT1B LTR MaLR 324 385 -5 460 220 0 10 chr5 19995245 19995345 -179634805 + LTR16A1 LTR ERVL 359 457 0 248 362 39 16 chr5 19995779 19995840 -179634310 + MIR3 SINE MIR 3 61 -147 1923 103 187 27 chr5 19995840 19996209 -179633941 - MSTA LTR MaLR 0 428 1 248 362 39 16 chr5 19996209 19996274 -179633876 + MIR3 SINE MIR 61 132 -76 180 97 0 0 chr5 19996292 19996323 -179633827 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 802 121 17 29 chr5 19996957 19997130 -179633020 + CT-rich Low_complexity Low_complexity 2 172 0 2105 120 0 3 chr5 19997132 19997441 -179632709 - AluSg SINE Alu -2 308 1 2130 97 3 3 chr5 19997617 19997906 -179632244 - AluSc SINE Alu -19 290 2 199 350 87 39 chr5 19997988 19998091 -179632059 + L2 LINE L2 3188 3295 -18 207 278 103 21 chr5 19998206 19998303 -179631847 + L2 LINE L2 3209 3313 0 2011 96 48 3 chr5 19998421 19998712 -179631438 - AluSg SINE Alu -6 304 1 1117 188 38 8 chr5 19998901 19999141 -179631009 + L1ME2 LINE L1 5910 6156 -8 253 355 58 25 chr5 19999406 19999527 -179630623 - MIR3 SINE MIR -78 130 6 430 146 45 0 chr5 19999528 19999638 -179630512 + CT-rich Low_complexity Low_complexity 1 115 0 2018 122 0 3 chr5 19999638 19999924 -179630226 - AluSx SINE Alu -27 285 1 340 303 97 14 chr5 19999976 20000121 -179630029 + MIR SINE MIR 40 196 -66 1853 128 3 3 chr5 20000930 20001254 -179628896 + AluJo SINE Alu 1 324 0 1547 142 4 18 chr5 20002175 20002450 -179627700 - AluJo SINE Alu -11 301 31 5254 81 135 7 chr5 20002450 20003182 -179626968 - LTR12 LTR ERV1 0 826 1 225 176 0 0 chr5 20003182 20003216 -179626934 - AluJo SINE Alu -266 34 1 22 0 0 0 chr5 20003727 20003749 -179626401 + AT_rich Low_complexity Low_complexity 1 22 0 1810 138 7 43 chr5 20004432 20004736 -179625414 + AluJb SINE Alu 1 293 -19 1820 217 127 55 chr5 20005476 20005695 -179624455 - L1MD2 LINE L1 0 6359 6157 189 0 0 0 chr5 20005695 20005716 -179624434 + (TG)n Simple_repeat Simple_repeat 2 22 0 1820 217 127 55 chr5 20005716 20005787 -179624363 - L1MD2 LINE L1 -202 6157 6093 1650 152 7 34 chr5 20005787 20006084 -179624066 + AluJo SINE Alu 1 289 -23 1820 217 127 55 chr5 20006084 20006403 -179623747 - L1MD2 LINE L1 -266 6093 5699 2169 116 3 0 chr5 20006403 20006705 -179623445 - AluSp SINE Alu -10 303 1 1820 217 127 55 chr5 20006705 20006729 -179623421 - L1MD2 LINE L1 -660 5699 5678 1752 145 0 7 chr5 20006856 20007145 -179623005 + AluSx SINE Alu 5 291 -21 22 0 0 0 chr5 20007151 20007173 -179622977 + AT_rich Low_complexity Low_complexity 1 22 0 1001 139 61 139 chr5 20007410 20007567 -179622583 + MER33 DNA MER1_type 8 125 -2460 1370 176 45 48 chr5 20007567 20007880 -179622270 + AluJo SINE Alu 1 312 0 1001 139 61 139 chr5 20007880 20008066 -179622084 + MER33 DNA MER1_type 125 324 0 226 316 0 0 chr5 20008071 20008128 -179622022 - MIR SINE MIR -131 131 75 1100 206 107 69 chr5 20008202 20008566 -179621584 - MSTD LTR MaLR -2 394 17 401 311 115 4 chr5 20008957 20009192 -179620958 - MIR SINE MIR 0 262 2 2243 101 0 3 chr5 20009380 20009688 -179620462 - AluSp SINE Alu -6 307 1 2395 62 0 0 chr5 20009699 20010003 -179620147 - AluY SINE Alu -7 304 1 2157 106 7 0 chr5 20010115 20010417 -179619733 - AluSx SINE Alu -8 304 1 812 215 29 17 chr5 20010564 20010736 -179619414 - MER58B DNA MER1_type 0 341 168 1975 103 48 0 chr5 20010787 20011079 -179619071 - AluSp SINE Alu -7 306 1 190 350 70 0 chr5 20011086 20011186 -179618964 - MIR SINE MIR -61 147 41 226 239 0 60 chr5 20011361 20011428 -179618722 - L1ME3A LINE L1 -143 6027 5965 569 288 37 12 chr5 20011795 20011958 -179618192 + MIR SINE MIR 77 243 -19 873 132 0 0 chr5 20012018 20012139 -179618011 - FLAM_C SINE Alu -22 121 1 195 338 13 60 chr5 20012143 20012294 -179617856 + L3 LINE CR1 638 781 -796 966 127 0 0 chr5 20012345 20012487 -179617663 + FLAM_C SINE Alu 1 142 -1 2314 84 3 0 chr5 20012500 20012799 -179617351 + AluSp SINE Alu 5 304 -9 903 38 0 0 chr5 20012810 20012916 -179617234 + AluY SINE Alu 1 106 -205 1198 173 0 41 chr5 20012916 20013159 -179616991 + pTR5 LTR ERV1 743 975 -1463 1488 51 0 30 chr5 20013170 20013367 -179616783 + AluY SINE Alu 107 297 -14 1276 150 165 49 chr5 20013421 20013748 -179616402 + MLT1A1 LTR MaLR 1 365 0 2126 102 7 3 chr5 20013759 20014063 -179616087 - AluSg SINE Alu -4 306 2 344 331 39 17 chr5 20014106 20014284 -179615866 + MIR SINE MIR 6 187 -75 531 333 59 13 chr5 20014554 20014860 -179615290 + L3b LINE CR1 1109 1428 -155 824 142 0 45 chr5 20014930 20015064 -179615086 + FLAM_C SINE Alu 2 129 -14 2139 104 0 25 chr5 20015073 20015389 -179614761 + AluY SINE Alu 1 308 -3 2201 100 7 0 chr5 20015974 20016273 -179613877 + AluSx SINE Alu 1 301 -11 627 202 0 0 chr5 20016373 20016477 -179613673 + MER58 DNA MER1_type 2 105 -2315 901 227 0 18 chr5 20016482 20016707 -179613443 + AluJb SINE Alu 87 307 -5 802 89 0 12 chr5 20016876 20016993 -179613157 - L1ME3A LINE L1 -525 5647 5552 189 0 0 0 chr5 20017126 20017147 -179613003 + (CAA)n Simple_repeat Simple_repeat 2 22 0 2025 98 4 0 chr5 20017633 20017949 -179612201 - AluSq SINE Alu 0 325 9 742 105 0 53 chr5 20018758 20018948 -179611202 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1837 136 0 0 chr5 20018978 20019250 -179610900 - AluSx SINE Alu -39 273 2 1486 185 33 0 chr5 20020358 20020634 -179609516 - AluJo SINE Alu -23 289 5 369 327 19 0 chr5 20020725 20020832 -179609318 - MER81 DNA DNA 0 114 6 397 102 0 220 chr5 20020929 20020976 -179609174 - L1MB2 LINE L1 -7 6164 6108 1896 177 24 0 chr5 20020976 20021315 -179608835 + MER7A DNA MER2_type 2 346 0 2056 118 14 0 chr5 20021316 20021613 -179608537 - AluSx SINE Alu 0 312 12 397 102 0 220 chr5 20021613 20021681 -179608469 - L1MB2 LINE L1 -62 6109 6073 209 308 13 26 chr5 20022137 20022215 -179607935 + L2 LINE L2 3237 3313 0 1788 170 3 6 chr5 20022258 20022570 -179607580 - AluJo SINE Alu -1 311 1 2037 116 24 0 chr5 20023103 20023397 -179606753 - AluSx SINE Alu -10 302 2 1667 158 29 4 chr5 20023420 20023698 -179606452 - AluJo SINE Alu -27 285 1 591 295 119 15 chr5 20023813 20024081 -179606069 - LTR16A LTR ERVL -53 397 102 260 263 0 0 chr5 20024336 20024393 -179605757 + GA-rich Low_complexity Low_complexity 2 58 0 215 332 68 58 chr5 20024898 20025103 -179605047 + L2 LINE L2 365 571 -2743 2390 66 0 7 chr5 20025243 20025548 -179604602 + AluY SINE Alu 1 303 -8 1027 260 89 9 chr5 20025653 20025968 -179604182 - LTR16C LTR ERVL 0 491 152 2300 101 0 0 chr5 20025993 20026300 -179603850 + AluSq SINE Alu 1 307 -6 1042 340 113 37 chr5 20026963 20027959 -179602191 + L2 LINE L2 1904 2975 -339 202 295 36 62 chr5 20028154 20028266 -179601884 + L2 LINE L2 3125 3233 -80 1616 153 9 87 chr5 20028429 20028762 -179601388 - AluJo SINE Alu -5 307 1 540 122 98 0 chr5 20029120 20029202 -179600948 - 5S rRNA rRNA -31 90 1 192 256 0 0 chr5 20029376 20029415 -179600735 + L3b LINE CR1 1443 1481 -102 243 358 20 57 chr5 20029616 20029862 -179600288 + L2 LINE L2 2823 3059 -213 312 229 16 0 chr5 20029935 20029996 -179600154 + MER91B DNA MER1_type 1 62 -128 215 354 80 18 chr5 20030524 20030637 -179599513 + L2 LINE L2 3127 3246 -26 2323 52 10 0 chr5 20030766 20031057 -179599093 - AluSc SINE Alu -7 302 9 760 276 86 0 chr5 20031058 20031268 -179598882 - MIR SINE MIR -34 228 1 1674 185 3 0 chr5 20031425 20031742 -179598408 - AluJb SINE Alu 0 318 1 2156 101 0 0 chr5 20032362 20032650 -179597500 - AluSx SINE Alu -14 298 11 1503 188 0 21 chr5 20032717 20032999 -179597151 - AluJo SINE Alu -32 280 5 2363 75 0 3 chr5 20033229 20033536 -179596614 + AluSc SINE Alu 1 306 -3 1929 184 30 45 chr5 20033898 20034175 -179595975 - MLT1B LTR MaLR 0 390 110 2265 87 0 10 chr5 20034175 20034487 -179595663 - AluSc SINE Alu 0 309 1 1929 184 30 45 chr5 20034487 20034507 -179595643 - MLT1B LTR MaLR -280 110 91 2272 137 87 20 chr5 20034507 20034908 -179595242 - MSTA LTR MaLR 0 428 1 1929 184 30 45 chr5 20034908 20035005 -179595145 - MLT1B LTR MaLR -299 91 1 222 233 12 12 chr5 20035144 20035230 -179594920 + (TAA)n Simple_repeat Simple_repeat 2 87 0 1745 120 3 45 chr5 20035926 20036218 -179593932 - AluSx SINE Alu -19 293 14 1491 178 45 42 chr5 20037092 20037469 -179592681 - LTR37A LTR ERV1 -3 423 46 2174 89 0 3 chr5 20037779 20038070 -179592080 - AluSc SINE Alu 0 309 20 274 241 0 128 chr5 20038542 20038675 -179591475 - L1ME1 LINE L1 -18 6148 6033 2386 76 0 0 chr5 20038705 20039008 -179591142 - AluY SINE Alu -8 303 1 254 214 40 40 chr5 20039017 20039143 -179591007 + Charlie7 DNA MER1_type 2451 2576 -36 336 258 32 11 chr5 20040227 20040320 -179589830 + Charlie7 DNA MER1_type 2509 2603 -9 1931 116 13 26 chr5 20040734 20041037 -179589113 - AluSx SINE Alu -13 299 1 1792 158 7 3 chr5 20041069 20041361 -179588789 + AluJb SINE Alu 1 293 -19 2119 112 0 0 chr5 20042178 20042473 -179587677 + AluSx SINE Alu 1 295 -17 1891 125 0 23 chr5 20043128 20043433 -179586717 - AluSx SINE Alu -14 298 1 697 125 0 2 chr5 20043475 20043705 -179586445 + AluJb SINE Alu 12 295 -17 234 0 0 0 chr5 20043729 20043755 -179586395 + (CA)n Simple_repeat Simple_repeat 2 27 0 665 144 24 72 chr5 20043756 20043881 -179586269 - FLAM_C SINE Alu -23 120 2 1923 104 4 7 chr5 20043889 20044168 -179585982 - AluSc SINE Alu -2 307 30 810 250 71 98 chr5 20044309 20044852 -179585298 + L1MC4 LINE L1 6634 7142 -819 2294 217 32 62 chr5 20044885 20045431 -179584719 + L1ME1 LINE L1 5520 6044 -122 2016 108 3 3 chr5 20045431 20045717 -179584433 - AluSc SINE Alu -13 296 11 2294 217 32 62 chr5 20045717 20045834 -179584316 + L1ME1 LINE L1 6044 6163 -3 608 286 79 26 chr5 20045869 20046173 -179583977 + L1MC4a LINE L1 7110 7429 -379 2217 96 13 0 chr5 20046275 20046577 -179583573 + AluSc SINE Alu 3 308 -1 1197 108 6 0 chr5 20046623 20046789 -179583361 + AluSx SINE Alu 1 167 -145 240 208 62 0 chr5 20046817 20046865 -179583285 + L1MC4 LINE L1 7843 7893 -149 262 115 39 0 chr5 20046868 20046920 -179583230 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 333 262 78 19 chr5 20047013 20047116 -179583034 + MER5B DNA MER1_type 37 145 -33 891 213 105 35 chr5 20047150 20047436 -179582714 - MLT1G LTR MaLR -57 533 228 285 280 90 50 chr5 20047436 20047494 -179582656 - MER5A DNA MER1_type -8 181 116 2076 118 0 0 chr5 20047494 20047791 -179582359 + AluSx SINE Alu 1 297 -15 285 280 90 50 chr5 20047791 20047832 -179582318 - MER5A DNA MER1_type -73 116 78 2135 121 0 3 chr5 20048172 20048486 -179581664 - AluSq SINE Alu 0 313 1 2201 88 3 0 chr5 20049207 20049502 -179580648 - AluSx SINE Alu -16 296 1 836 240 13 69 chr5 20049610 20049843 -179580307 + MER58A DNA MER1_type 5 224 0 691 289 95 29 chr5 20050091 20050333 -179579817 + MIR SINE MIR 5 262 0 762 200 0 65 chr5 20050499 20050627 -179579523 + MER5A DNA MER1_type 2 120 -69 738 246 60 15 chr5 20050627 20050826 -179579324 + MER63A DNA MER1_type 3 210 0 762 200 0 65 chr5 20050826 20050852 -179579298 + MER5A DNA MER1_type 120 146 -43 260 282 127 0 chr5 20050912 20050983 -179579167 + MIR SINE MIR 21 100 -162 1945 100 14 11 chr5 20051410 20051711 -179578439 - AluSc SINE Alu 0 302 1 580 302 62 23 chr5 20051921 20052056 -179578094 + MLT1L LTR MaLR 10 138 -477 877 217 24 38 chr5 20052056 20052182 -179577968 + MER3 DNA MER1_type 1 127 -82 216 0 0 0 chr5 20052182 20052206 -179577944 + (TTTAA)n Simple_repeat Simple_repeat 4 27 0 1999 131 0 0 chr5 20052207 20052504 -179577646 - AluSx SINE Alu -15 297 1 877 217 24 38 chr5 20052504 20052587 -179577563 + MER3 DNA MER1_type 126 209 0 580 302 62 23 chr5 20052587 20052709 -179577441 + MLT1L LTR MaLR 138 277 -338 864 314 20 0 chr5 20052877 20053132 -179577018 - MIR SINE MIR -1 261 2 286 292 33 25 chr5 20053166 20053286 -179576864 + MLT1L LTR MaLR 494 614 -1 250 184 41 0 chr5 20054186 20054235 -179575915 - L2 LINE L2 -1 3312 3262 1808 148 7 3 chr5 20054256 20054546 -179575604 - AluSx SINE Alu -21 291 1 208 342 108 8 chr5 20054675 20054795 -179575355 - MIR SINE MIR -95 167 36 195 304 160 50 chr5 20055415 20055596 -179574554 - MIR SINE MIR -54 208 8 814 149 8 0 chr5 20055628 20055749 -179574401 - FLAM_A SINE Alu -11 122 1 202 341 12 47 chr5 20055763 20055848 -179574302 - MIR3 SINE MIR -34 174 93 201 39 0 0 chr5 20056031 20056057 -179574093 + (TG)n Simple_repeat Simple_repeat 1 26 0 246 156 0 52 chr5 20056460 20056473 -179573677 + A-rich Low_complexity Low_complexity 2 14 -60 953 167 12 24 chr5 20056473 20056641 -179573509 + FRAM SINE Alu 1 166 0 246 156 0 52 chr5 20056641 20056704 -179573446 + A-rich Low_complexity Low_complexity 14 74 0 1436 217 26 0 chr5 20057272 20057582 -179572568 - AluJo SINE Alu 0 318 1 253 154 0 46 chr5 20057619 20057684 -179572466 + CT-rich Low_complexity Low_complexity 2 63 0 279 190 0 0 chr5 20059023 20059081 -179571069 + (TG)n Simple_repeat Simple_repeat 1 58 0 578 315 75 4 chr5 20059082 20059323 -179570827 + MIR SINE MIR 4 261 -1 2192 95 7 0 chr5 20061110 20061415 -179568735 - AluSq SINE Alu -6 307 1 1491 198 113 19 chr5 20061435 20061859 -179568291 - MLT1C LTR MaLR -3 464 1 2196 107 0 0 chr5 20063707 20064005 -179566145 + AluSx SINE Alu 1 298 -14 422 289 75 46 chr5 20064491 20064664 -179565486 - L3b LINE CR1 -29 1554 1377 24 0 0 0 chr5 20065212 20065236 -179564914 + AT_rich Low_complexity Low_complexity 1 24 0 2136 93 3 7 chr5 20065236 20065525 -179564625 - AluSx SINE Alu -24 288 1 1157 257 118 22 chr5 20065809 20066268 -179563882 + MLT1D LTR MaLR 1 503 -2 2180 110 3 0 chr5 20066501 20066810 -179563340 - AluSg SINE Alu 0 310 1 425 82 33 0 chr5 20067240 20067301 -179562849 - AluJo SINE Alu -10 300 238 1657 178 39 43 chr5 20067318 20067734 -179562416 + pTR5 LTR ERV1 746 1159 -1279 2416 53 0 28 chr5 20068136 20068456 -179561694 - AluY SINE Alu 0 311 1 379 176 0 15 chr5 20068456 20068524 -179561626 - AluJo SINE Alu -2 300 234 2325 134 34 18 chr5 20068524 20068905 -179561245 - MER61D LTR ERV1 -1 500 114 1181 183 35 4 chr5 20068948 20069177 -179560973 - AluJo SINE Alu -76 236 1 238 242 32 32 chr5 20069309 20069371 -179560779 - MER5B DNA MER1_type 0 178 117 1656 146 47 23 chr5 20069444 20069745 -179560405 + AluJb SINE Alu 1 308 -4 335 274 21 21 chr5 20070221 20070316 -179559834 + MER5B DNA MER1_type 84 178 0 2323 73 0 19 chr5 20070483 20070800 -179559350 + AluY SINE Alu 1 311 0 1967 124 10 3 chr5 20070814 20071121 -179559029 + AluSc SINE Alu 1 309 0 545 221 24 80 chr5 20071156 20071369 -179558781 + MLT1B LTR MaLR 178 378 -12 348 235 73 89 chr5 20071669 20071708 -179558442 - L1MC4a LINE L1 -1445 6363 6325 2022 123 0 29 chr5 20071708 20072024 -179558126 - AluSq SINE Alu -6 307 1 348 235 73 89 chr5 20072024 20072439 -179557711 - L1MC4a LINE L1 -1483 6325 5943 2103 85 34 3 chr5 20072645 20072938 -179557212 + AluSq SINE Alu 2 303 -10 1286 201 37 40 chr5 20072938 20073237 -179556913 - AluJo SINE Alu 0 302 5 676 160 80 16 chr5 20073686 20073697 -179556453 - FLAM_C SINE Alu -169 133 124 225 0 0 0 chr5 20073697 20073722 -179556428 + (TTAA)n Simple_repeat Simple_repeat 3 27 0 676 160 80 16 chr5 20073722 20073835 -179556315 - FLAM_C SINE Alu -178 124 1 416 203 14 0 chr5 20073856 20073930 -179556220 - MER58 DNA MER1_type -2 2418 2344 465 309 125 17 chr5 20074149 20074444 -179555706 + MLT1I LTR MaLR 64 390 -19 559 157 167 9 chr5 20074594 20074702 -179555448 - FLAM_C SINE Alu -8 125 1 1852 148 7 7 chr5 20074819 20075124 -179555026 + AluJb SINE Alu 1 305 -7 572 284 70 74 chr5 20075546 20075789 -179554361 - MIR SINE MIR 0 262 21 2254 86 3 0 chr5 20075957 20076261 -179553889 - AluSq SINE Alu -8 305 1 2392 78 3 0 chr5 20077287 20077594 -179552556 + AluY SINE Alu 1 308 -3 1799 166 0 10 chr5 20077800 20078113 -179552037 + AluJb SINE Alu 1 310 -2 1037 81 0 7 chr5 20078188 20078324 -179551826 + AluSq/x SINE Alu 1 135 -178 1911 119 14 0 chr5 20078324 20078610 -179551540 + AluSg SINE Alu 1 290 -20 204 286 107 45 chr5 20079382 20079431 -179550719 + L3 LINE CR1 1452 1497 -80 8198 57 4 6 chr5 20079431 20080440 -179549710 - LTR13 LTR ERVK 0 1007 1 204 286 107 45 chr5 20080440 20080502 -179549648 + L3 LINE CR1 1496 1570 -7 210 37 0 0 chr5 20080896 20080923 -179549227 + (TCTCTG)n Simple_repeat Simple_repeat 4 30 0 716 197 27 7 chr5 20081495 20081642 -179548508 + MER3 DNA MER1_type 17 166 -43 2002 132 13 10 chr5 20081778 20081953 -179548197 - AluSx SINE Alu 0 312 134 1907 108 54 0 chr5 20081953 20082230 -179547920 - AluSp SINE Alu -21 292 1 2002 132 13 10 chr5 20082230 20082365 -179547785 - AluSx SINE Alu -178 134 1 213 121 0 0 chr5 20082605 20082638 -179547512 + (TCCC)n Simple_repeat Simple_repeat 1 33 0 2053 97 0 7 chr5 20082638 20082927 -179547223 - AluSc SINE Alu -22 287 1 885 160 70 6 chr5 20083132 20083288 -179546862 + FRAM SINE Alu 1 166 0 355 327 64 26 chr5 20083310 20083466 -179546684 - MIR3 SINE MIR -43 165 4 216 67 0 0 chr5 20083563 20083593 -179546557 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2019 123 0 3 chr5 20083593 20083878 -179546272 - AluSx SINE Alu -28 284 1 1507 103 0 5 chr5 20083896 20084110 -179546040 - AluSg/x SINE Alu -15 295 83 544 244 118 0 chr5 20084209 20084344 -179545806 + MER58B DNA MER1_type 191 341 0 1267 186 35 17 chr5 20084369 20084627 -179545523 - MLT1D LTR MaLR 0 505 252 1752 147 3 11 chr5 20084627 20084948 -179545202 - AluJb SINE Alu 0 319 1 180 0 0 0 chr5 20084955 20084975 -179545175 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 863 128 0 0 chr5 20084988 20085113 -179545037 - FLAM_C SINE Alu -6 127 3 380 257 95 0 chr5 20086689 20086794 -179543356 - MIR SINE MIR 0 262 148 511 127 13 0 chr5 20086795 20086874 -179543276 - MADE1 DNA Mariner 0 80 1 549 222 0 0 chr5 20086874 20086982 -179543168 - MIR SINE MIR -111 151 44 1825 143 7 0 chr5 20087045 20087338 -179542812 - AluSq SINE Alu -14 299 5 352 278 0 52 chr5 20087539 20087654 -179542496 - L2 LINE L2 -9 3304 3196 363 291 97 84 chr5 20087701 20088250 -179541900 + L2 LINE L2 1442 1997 -1317 197 338 0 29 chr5 20088455 20088523 -179541627 + L2 LINE L2 3224 3289 -24 180 0 0 0 chr5 20088979 20088999 -179541151 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1989 122 3 0 chr5 20088999 20089285 -179540865 - AluSx SINE Alu -25 287 1 495 245 190 27 chr5 20089654 20089838 -179540312 + MER58C DNA MER1_type 2 215 0 2212 104 0 3 chr5 20090123 20090411 -179539739 + AluSq SINE Alu 1 287 -26 183 114 0 0 chr5 20090414 20090449 -179539701 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 1318 196 0 4 chr5 20090460 20090690 -179539460 + AluJo SINE Alu 1 229 -83 180 77 0 0 chr5 20090726 20090752 -179539398 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 812 248 73 100 chr5 20091103 20091646 -179538504 + L1MC4 LINE L1 6634 7142 -819 2333 217 32 60 chr5 20091679 20092224 -179537926 + L1ME1 LINE L1 5520 6044 -122 2125 109 3 3 chr5 20092224 20092509 -179537641 - AluSc SINE Alu -14 295 11 2333 217 32 60 chr5 20092509 20092626 -179537524 + L1ME1 LINE L1 6044 6163 -3 617 286 79 26 chr5 20092661 20092965 -179537185 + L1MC4a LINE L1 7110 7429 -379 2240 106 13 3 chr5 20093067 20093369 -179536781 + AluSc SINE Alu 3 307 -2 453 121 0 0 chr5 20093562 20093628 -179536522 - LTR7 LTR ERV1 -384 66 1 1450 132 23 39 chr5 20093632 20093684 -179536466 + MER4E-int LTR ERV1 6214 6265 -493 2605 66 0 0 chr5 20093684 20093989 -179536161 + AluY SINE Alu 1 305 -6 1450 132 23 39 chr5 20093989 20094296 -179535854 + MER4E-int LTR ERV1 6265 6608 -150 431 62 0 0 chr5 20094296 20094360 -179535790 - AluSp/q SINE Alu -7 306 243 2525 63 0 0 chr5 20094626 20094925 -179535225 + AluSc SINE Alu 1 299 -10 225 0 0 0 chr5 20095216 20095241 -179534909 + (T)n Simple_repeat Simple_repeat 1 25 0 4452 123 70 20 chr5 20095522 20096264 -179533886 + MER4E LTR ERV1 1 779 0 25 0 0 0 chr5 20096279 20096304 -179533846 + AT_rich Low_complexity Low_complexity 1 25 0 2383 81 3 0 chr5 20096304 20096600 -179533550 - AluY SINE Alu -14 297 1 860 128 0 30 chr5 20096605 20096738 -179533412 - FLAM_C SINE Alu -4 139 11 257 258 16 0 chr5 20098004 20098066 -179532084 - L1ME3A LINE L1 -98 6072 6010 540 238 146 31 chr5 20098186 20098434 -179531716 - L1ME3A LINE L1 -211 5951 5671 227 415 36 23 chr5 20098477 20098778 -179531372 + L3 LINE CR1 115 419 -1158 1752 81 0 5 chr5 20099035 20099257 -179530893 + AluSg/x SINE Alu 79 299 -11 406 168 117 97 chr5 20099474 20099670 -179530480 - L1MB8 LINE L1 -13 6165 5966 2271 74 7 3 chr5 20099673 20099956 -179530194 + AluY SINE Alu 4 287 -24 1835 141 6 28 chr5 20100457 20100776 -179529374 + AluJo SINE Alu 1 312 0 2321 103 3 3 chr5 20102702 20103004 -179527146 - AluSg SINE Alu -8 302 1 1874 130 3 27 chr5 20104008 20104300 -179525850 - AluJb SINE Alu -14 298 14 1878 150 0 7 chr5 20104541 20104821 -179525329 - AluSx SINE Alu -34 278 1 2440 170 0 57 chr5 20104870 20105342 -179524808 + L1MB3 LINE L1 5690 6131 -52 2301 88 7 0 chr5 20105342 20105638 -179524512 + AluSc SINE Alu 9 306 -3 2440 170 0 57 chr5 20105638 20105689 -179524461 + L1MB3 LINE L1 6131 6183 0 345 319 66 28 chr5 20106417 20106604 -179523546 - MIR SINE MIR -10 252 55 1808 143 4 4 chr5 20106604 20106876 -179523274 + AluSx SINE Alu 1 272 -40 345 319 66 28 chr5 20106876 20106901 -179523249 - MIR SINE MIR -207 55 32 578 178 29 63 chr5 20106961 20107051 -179523099 - MER33 DNA MER1_type -2261 324 241 1554 208 10 0 chr5 20107051 20107349 -179522801 + AluJo SINE Alu 1 301 -11 578 178 29 63 chr5 20107349 20107432 -179522718 - MER33 DNA MER1_type -2344 241 157 1684 194 14 7 chr5 20107434 20107723 -179522427 - AluJo SINE Alu -21 291 1 537 163 85 47 chr5 20107723 20107852 -179522298 - AluJo SINE Alu -177 135 2 648 225 46 0 chr5 20107857 20108008 -179522142 - MER33 DNA MER1_type -164 160 3 412 204 16 0 chr5 20108110 20108200 -179521950 + L1P5 LINE L1 5585 5678 -473 2338 92 3 0 chr5 20108345 20108638 -179521512 - AluSg SINE Alu -16 294 1 564 286 69 18 chr5 20108798 20109015 -179521135 + MIR SINE MIR 35 262 0 889 227 85 48 chr5 20109684 20109867 -179520283 - Charlie7 DNA MER1_type -1889 723 548 2258 107 0 0 chr5 20109867 20110157 -179519993 - AluSx SINE Alu -22 290 1 889 227 85 48 chr5 20110157 20110326 -179519824 - Charlie7 DNA MER1_type -2064 548 358 837 265 78 48 chr5 20111110 20111548 -179518602 - HAL1 LINE L1 -10 2497 2047 1578 274 172 35 chr5 20111709 20111882 -179518268 - HAL1 LINE L1 -698 1809 1661 1812 179 10 7 chr5 20111882 20112189 -179517961 + AluJb SINE Alu 1 308 -4 1578 274 172 35 chr5 20112189 20112828 -179517322 - HAL1 LINE L1 -846 1661 1111 1878 128 82 0 chr5 20112828 20112990 -179517160 - AluSq SINE Alu -5 308 161 477 0 0 0 chr5 20112990 20113043 -179517107 + (TG)n Simple_repeat Simple_repeat 2 54 0 1878 128 82 0 chr5 20113043 20113161 -179516989 - AluSq SINE Alu -152 161 5 1578 274 172 35 chr5 20113161 20113500 -179516650 - HAL1 LINE L1 -1396 1111 499 360 266 18 26 chr5 20114569 20114682 -179515468 - MLT1I LTR MaLR 0 409 298 542 296 31 0 chr5 20114721 20114883 -179515267 - MLT1I LTR MaLR -197 212 46 197 250 17 17 chr5 20114973 20115033 -179515117 - MIR SINE MIR -87 175 116 537 128 0 0 chr5 20115206 20115284 -179514866 - AluSg/x SINE Alu -20 290 213 1018 111 7 0 chr5 20116240 20116375 -179513775 + AluSq/x SINE Alu 1 136 -176 1864 123 0 4 chr5 20116375 20116627 -179513523 + AluSx SINE Alu 1 251 -61 491 220 61 45 chr5 20116737 20116869 -179513281 - L2 LINE L2 0 3313 3180 1506 114 4 26 chr5 20116888 20117115 -179513035 + AluJb SINE Alu 87 308 -4 2129 115 0 0 chr5 20117564 20117842 -179512308 + AluSx SINE Alu 6 283 -29 189 74 0 0 chr5 20117845 20117872 -179512278 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1435 242 37 67 chr5 20117878 20118334 -179511816 - L2 LINE L2 -595 2719 2282 1861 162 3 10 chr5 20118334 20118637 -179511513 + AluJo SINE Alu 1 301 -11 1435 242 37 67 chr5 20118637 20118751 -179511399 - L2 LINE L2 -1032 2282 2166 429 279 108 29 chr5 20119121 20119361 -179510789 - MIR SINE MIR -3 259 1 2218 101 20 0 chr5 20119480 20119778 -179510372 - AluSp SINE Alu -9 304 1 2537 140 70 0 chr5 20119778 20120179 -179509971 + MER4B-int LTR ERV1 3647 4075 -2683 5982 119 30 45 chr5 20120179 20121743 -179508407 + pTR5 LTR ERV1 743 2438 0 9247 144 73 23 chr5 20121767 20121860 -179508290 + MER4B-int LTR ERV1 4462 4549 -2209 1893 126 42 3 chr5 20121860 20122145 -179508005 + AluSg SINE Alu 1 296 -14 9247 144 73 23 chr5 20122145 20123255 -179506895 + MER4B-int LTR ERV1 4549 5774 -984 2260 112 3 0 chr5 20123255 20123558 -179506592 + AluSx SINE Alu 1 304 -8 9247 144 73 23 chr5 20123558 20124024 -179506126 + MER4B-int LTR ERV1 5774 6215 -543 2654 84 3 11 chr5 20124025 20124392 -179505758 - LTR7 LTR ERV1 -2 448 85 847 267 14 0 chr5 20125168 20125389 -179504761 + MER58A DNA MER1_type 1 224 0 2189 85 24 3 chr5 20125485 20125779 -179504371 + AluSx SINE Alu 1 300 -12 1563 104 146 15 chr5 20125784 20126044 -179504106 + AluSq SINE Alu 1 294 -9 1974 130 0 7 chr5 20126098 20126382 -179503768 + AluSx SINE Alu 1 282 -30 1095 79 0 0 chr5 20126536 20126676 -179503474 + AluSg/x SINE Alu 173 312 0 508 114 0 0 chr5 20126686 20126756 -179503394 + AluS SINE Alu 6 75 -238 21 0 0 0 chr5 20126966 20126987 -179503163 + AT_rich Low_complexity Low_complexity 1 21 0 486 168 8 48 chr5 20126990 20127115 -179503035 - L1MA8 LINE L1 -3 6288 6169 496 125 0 0 chr5 20127115 20127187 -179502963 + L1MA8 LINE L1 6081 6152 -139 2138 110 13 32 chr5 20127280 20127609 -179502541 + AluSx SINE Alu 9 331 0 1970 120 64 25 chr5 20128135 20128494 -179501656 - THE1C LTR MaLR -2 373 1 2350 87 3 3 chr5 20128573 20128871 -179501279 + AluSx SINE Alu 1 298 -14 814 163 0 15 chr5 20128879 20129014 -179501136 + FLAM_C SINE Alu 1 133 0 2042 119 10 16 chr5 20129556 20129882 -179500268 + AluSx SINE Alu 1 312 0 3024 123 40 80 chr5 20131122 20131699 -179498451 - MER41A LTR ERV1 0 554 1 2371 79 23 0 chr5 20131730 20132034 -179498116 + AluY SINE Alu 1 311 0 235 150 83 33 chr5 20132668 20132728 -179497422 - MER20 DNA MER1_type -2 217 155 815 272 25 0 chr5 20132835 20133074 -179497076 + AluSg/x SINE Alu 68 312 0 279 146 73 18 chr5 20133705 20133760 -179496390 - MER20 DNA MER1_type -2 217 160 24 0 0 0 chr5 20133823 20133847 -179496303 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 20135016 20135037 -179495113 + AT_rich Low_complexity Low_complexity 1 21 0 995 132 20 93 chr5 20135517 20135721 -179494429 + MER20 DNA MER1_type 1 189 -30 459 113 0 0 chr5 20137113 20137193 -179492957 + (GA)n Simple_repeat Simple_repeat 1 80 0 252 260 0 88 chr5 20137238 20137430 -179492720 + G-rich Low_complexity Low_complexity 3 177 0 460 310 0 22 chr5 20137472 20137656 -179492494 + G-rich Low_complexity Low_complexity 1 180 0 321 155 0 0 chr5 20137677 20137735 -179492415 + (CGG)n Simple_repeat Simple_repeat 2 59 0 42 71 0 0 chr5 20137888 20137972 -179492178 + GC_rich Low_complexity Low_complexity 1 84 0 26 0 0 0 chr5 20138658 20138684 -179491466 + GC_rich Low_complexity Low_complexity 1 26 0 206 250 0 0 chr5 20141071 20141115 -179489035 + (CATATA)n Simple_repeat Simple_repeat 1 44 0 180 0 0 0 chr5 20141436 20141456 -179488694 + (T)n Simple_repeat Simple_repeat 1 20 0 682 239 149 0 chr5 20143238 20143426 -179486724 + MIR SINE MIR 9 224 -38 199 216 27 108 chr5 20143738 20143812 -179486338 + MIR SINE MIR 28 95 -167 2254 90 27 7 chr5 20146993 20147293 -179482857 - AluSg SINE Alu -4 306 1 1153 132 12 0 chr5 20147293 20147460 -179482690 - AluSg/x SINE Alu -19 293 125 2080 103 10 10 chr5 20147476 20147766 -179482384 - AluSx SINE Alu -22 290 1 606 191 55 0 chr5 20150072 20150182 -179479968 - MLT1B LTR MaLR -7 383 268 1906 83 124 8 chr5 20150183 20150448 -179479702 - AluSg1 SINE Alu -13 296 1 1866 112 40 14 chr5 20150951 20151258 -179478892 - AluSx SINE Alu 0 314 1 390 303 203 29 chr5 20151802 20152271 -179477879 + L2 LINE L2 2708 3265 -7 180 318 91 0 chr5 20152876 20152942 -179477208 + L2 LINE L2 3150 3221 -51 2110 108 0 7 chr5 20154244 20154564 -179475586 + AluSx SINE Alu 1 318 0 2460 72 0 7 chr5 20155656 20155960 -179474190 - AluY SINE Alu -9 302 1 1135 72 144 0 chr5 20156367 20156534 -179473616 - MER30 DNA MER1_type -37 193 3 2329 90 0 3 chr5 20156662 20156963 -179473187 - AluSq SINE Alu -13 300 1 1950 75 0 43 chr5 20157464 20157769 -179472381 + AluY SINE Alu 1 292 -19 1974 129 38 0 chr5 20158140 20158427 -179471723 - AluSx SINE Alu -14 298 1 2403 87 0 0 chr5 20159611 20159909 -179470241 - AluY SINE Alu -13 298 1 726 197 0 33 chr5 20160471 20160623 -179469527 + MLT1A1 LTR MaLR 1 147 -218 297 100 0 0 chr5 20160632 20160682 -179469468 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 503 171 0 0 chr5 20160689 20160765 -179469385 + AluJb SINE Alu 202 277 -35 2124 106 3 3 chr5 20160765 20161082 -179469068 + AluSx SINE Alu 1 317 0 630 162 29 9 chr5 20161123 20161228 -179468922 + U6 snRNA snRNA 1 107 0 542 209 37 15 chr5 20161252 20161382 -179468768 + MLT1A1 LTR MaLR 220 365 0 21 57 0 0 chr5 20161472 20161507 -179468643 + AT_rich Low_complexity Low_complexity 1 35 0 474 207 65 83 chr5 20161552 20161605 -179468545 - MIR SINE MIR -21 241 189 2079 150 0 0 chr5 20161605 20161912 -179468238 - AluSx SINE Alu -5 307 1 474 207 65 83 chr5 20161912 20162027 -179468123 - MIR SINE MIR -73 189 76 1614 155 14 25 chr5 20162837 20163114 -179467036 - L1MC1 LINE L1 -10 6323 6050 2084 130 0 17 chr5 20163665 20163966 -179466184 - AluSx SINE Alu -16 296 1 2166 79 54 0 chr5 20165206 20165486 -179464664 - AluSc SINE Alu -14 295 1 1703 137 7 26 chr5 20165647 20165918 -179464232 + AluSg SINE Alu 33 298 -12 22 0 0 0 chr5 20166127 20166149 -179464001 + AT_rich Low_complexity Low_complexity 1 22 0 228 277 54 45 chr5 20166369 20166481 -179463669 - MIR SINE MIR -129 133 21 2090 109 0 26 chr5 20166792 20167095 -179463055 + AluSg SINE Alu 1 295 -15 1754 154 7 0 chr5 20167505 20167810 -179462340 + AluJb SINE Alu 9 315 0 2144 117 3 19 chr5 20170531 20170839 -179459311 - AluSx SINE Alu -9 303 1 2557 64 0 0 chr5 20171185 20171496 -179458654 - AluY SINE Alu 0 311 1 388 301 24 0 chr5 20171555 20171678 -179458472 - MLT1J LTR MaLR -7 504 379 596 136 0 0 chr5 20171707 20171810 -179458340 + L1MA4 LINE L1 6193 6295 -5 608 128 0 0 chr5 20171817 20171919 -179458231 + L1MA4 LINE L1 6194 6295 -5 556 140 0 0 chr5 20171928 20172028 -179458122 + L1MA4 LINE L1 6196 6295 -5 229 279 96 0 chr5 20172069 20172173 -179457977 - MLT1J LTR MaLR -173 338 225 286 302 108 76 chr5 20172225 20172688 -179457462 - L2 LINE L2 -760 2554 2077 297 318 40 20 chr5 20172946 20173097 -179457053 - MIR SINE MIR -64 198 45 847 199 12 18 chr5 20173444 20173610 -179456540 - MER58B DNA MER1_type 0 341 177 1985 157 0 6 chr5 20173793 20174106 -179456044 - AluJb SINE Alu -1 311 1 22 0 0 0 chr5 20174682 20174704 -179455446 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 20175674 20175695 -179454455 + AT_rich Low_complexity Low_complexity 1 21 0 286 290 30 31 chr5 20177152 20177267 -179452883 - MIR SINE MIR -64 144 47 361 354 12 49 chr5 20178978 20179142 -179451008 + MER5A DNA MER1_type 3 160 -29 2532 128 3 35 chr5 20179625 20180001 -179450149 - THE1B LTR MaLR 0 364 1 185 298 21 0 chr5 20180034 20180081 -179450069 - L2 LINE L2 -1 3271 3224 785 131 0 62 chr5 20181492 20181622 -179448528 + FLAM_C SINE Alu 1 122 -11 23 33 0 0 chr5 20181622 20181652 -179448498 + AT_rich Low_complexity Low_complexity 1 30 0 653 276 12 0 chr5 20182988 20183158 -179446992 + MIR SINE MIR 36 207 -55 2517 63 0 3 chr5 20183449 20183750 -179446400 - AluY SINE Alu -11 300 1 935 122 0 15 chr5 20183903 20184034 -179446116 - FLAM_C SINE Alu 0 133 5 252 171 24 49 chr5 20184053 20184135 -179446015 - L1MA7 LINE L1 -66 6225 6146 2180 96 10 35 chr5 20187132 20187446 -179442704 + AluSx SINE Alu 5 310 -2 2126 118 0 20 chr5 20188115 20188419 -179441731 - AluSg SINE Alu -8 302 5 270 56 0 0 chr5 20188425 20188461 -179441689 + (T)n Simple_repeat Simple_repeat 1 36 0 22 35 0 0 chr5 20188880 20188909 -179441241 + AT_rich Low_complexity Low_complexity 1 29 0 2298 104 3 3 chr5 20190605 20190913 -179439237 - AluSp SINE Alu -5 308 1 25 0 0 0 chr5 20191446 20191471 -179438679 + AT_rich Low_complexity Low_complexity 1 25 0 208 195 0 0 chr5 20191471 20191512 -179438638 - MIR SINE MIR -133 129 89 1802 132 75 0 chr5 20191730 20191750 -179438400 - AluSx SINE Alu 0 312 295 205 40 0 0 chr5 20191750 20191775 -179438375 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 1802 132 75 0 chr5 20191775 20192035 -179438115 - AluSx SINE Alu -17 295 1 2234 118 3 10 chr5 20192398 20192711 -179437439 + AluSx SINE Alu 1 311 -1 236 302 47 39 chr5 20193043 20193172 -179436978 + MIR SINE MIR 124 253 -9 37 0 0 0 chr5 20194636 20194673 -179435477 + AT_rich Low_complexity Low_complexity 1 37 0 874 177 6 0 chr5 20195493 20195651 -179434499 + AluJb SINE Alu 133 291 -21 23 54 0 0 chr5 20196153 20196190 -179433960 + GC_rich Low_complexity Low_complexity 1 37 0 23 68 0 0 chr5 20196201 20196245 -179433905 + GC_rich Low_complexity Low_complexity 1 44 0 488 36 48 0 chr5 20196557 20196640 -179433510 + (TC)n Simple_repeat Simple_repeat 1 87 0 195 69 0 0 chr5 20197341 20197370 -179432780 + (A)n Simple_repeat Simple_repeat 1 29 0 799 142 0 22 chr5 20197579 20197713 -179432437 + FLAM_C SINE Alu 1 131 -2 226 272 102 75 chr5 20198065 20198212 -179431938 + MIR3 SINE MIR 21 171 -37 21 36 0 0 chr5 20199131 20199159 -179430991 + AT_rich Low_complexity Low_complexity 1 28 0 1664 150 52 36 chr5 20200727 20201034 -179429116 - AluJo SINE Alu 0 312 1 1570 177 9 40 chr5 20201317 20201639 -179428511 - AluSx SINE Alu 0 312 1 1852 149 10 3 chr5 20202171 20202459 -179427691 + AluSx SINE Alu 3 292 -20 369 109 0 0 chr5 20202462 20202517 -179427633 + (CA)n Simple_repeat Simple_repeat 2 56 0 197 0 0 67 chr5 20203236 20203266 -179426884 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr5 20203357 20203377 -179426773 + (CA)n Simple_repeat Simple_repeat 2 21 0 747 62 0 0 chr5 20203628 20203725 -179426425 + (TTCC)n Simple_repeat Simple_repeat 1 97 0 2150 112 17 0 chr5 20204117 20204411 -179425739 - AluSx SINE Alu -13 299 1 2502 84 3 0 chr5 20205092 20205401 -179424749 + AluSx SINE Alu 1 310 -2 293 213 32 85 chr5 20205698 20205792 -179424358 - L2 LINE L2 0 3272 3184 819 188 0 0 chr5 20205795 20205928 -179424222 + FLAM_C SINE Alu 1 133 -10 4411 173 18 35 chr5 20205941 20206320 -179423830 + L1MA7 LINE L1 5408 5792 -499 1604 169 68 14 chr5 20206320 20206615 -179423535 + AluJb SINE Alu 1 311 -1 4411 173 18 35 chr5 20206615 20207130 -179423020 + L1MA7 LINE L1 5792 6287 -4 838 329 45 26 chr5 20207136 20207466 -179422684 + L2 LINE L2 2250 2595 -719 2004 134 0 3 chr5 20207466 20207626 -179422524 - AluSx SINE Alu -19 293 133 2174 103 24 0 chr5 20207626 20207917 -179422233 - AluSg SINE Alu -12 298 1 2004 134 0 3 chr5 20207917 20208039 -179422111 - AluSx SINE Alu -179 133 12 838 329 45 26 chr5 20208039 20208237 -179421913 + L2 LINE L2 2595 2788 -526 537 229 121 0 chr5 20208283 20208423 -179421727 - MER45A DNA AcHobo -20 158 2 695 273 123 50 chr5 20208461 20208923 -179421227 + L2 LINE L2 2818 3313 0 2403 119 14 27 chr5 20209013 20209382 -179420768 - THE1B LTR MaLR 0 364 1 248 354 89 15 chr5 20209432 20209827 -179420323 - L2 LINE L2 -337 2977 2554 2306 94 3 0 chr5 20209871 20210158 -179419992 + AluSx SINE Alu 13 300 -12 251 324 83 52 chr5 20210158 20210474 -179419676 - L2 LINE L2 -2912 402 74 501 271 133 0 chr5 20210824 20211005 -179419145 + MIR SINE MIR 40 244 -18 202 280 140 0 chr5 20211319 20211426 -179418724 + L2 LINE L2 3181 3302 -11 1993 169 0 6 chr5 20211520 20211834 -179418316 + AluJb SINE Alu 1 312 0 26 30 0 0 chr5 20212054 20212087 -179418063 + AT_rich Low_complexity Low_complexity 1 33 0 2035 140 13 0 chr5 20212704 20213012 -179417138 - AluSx SINE Alu 0 312 1 2173 121 16 0 chr5 20213488 20213793 -179416357 + AluSx SINE Alu 1 310 -2 255 241 284 7 chr5 20214004 20214145 -179416005 - MER5A DNA MER1_type -1 188 9 2000 127 0 23 chr5 20214275 20214574 -179415576 + AluSg SINE Alu 1 292 -18 1840 154 31 0 chr5 20215223 20215509 -179414641 + AluJb SINE Alu 1 295 -17 842 104 48 0 chr5 20215828 20215953 -179414197 - AluY SINE Alu -7 304 174 1982 120 4 4 chr5 20215953 20216229 -179413921 - AluSg SINE Alu -34 276 1 367 268 0 0 chr5 20216819 20216890 -179413260 + LTR53 LTR ERVL 449 519 0 1943 178 66 6 chr5 20217249 20217650 -179412500 + MLT2B1 LTR ERVL 1 471 -44 338 256 44 0 chr5 20217680 20217770 -179412380 - Tigger3(Golem) DNA MER2_type -2 3027 2934 319 215 0 151 chr5 20217885 20217978 -179412172 - Tigger3(Golem) DNA MER2_type -2949 80 2 352 189 11 11 chr5 20218016 20218106 -179412044 + (TA)n Simple_repeat Simple_repeat 1 90 0 227 155 69 35 chr5 20218148 20218206 -179411944 + MLT2B1 LTR ERVL 456 515 0 496 260 106 19 chr5 20218311 20218519 -179411631 + MIR SINE MIR 6 231 -31 21 0 0 0 chr5 20218519 20218540 -179411610 + AT_rich Low_complexity Low_complexity 1 21 0 2207 112 0 7 chr5 20218604 20218922 -179411228 - AluSx SINE Alu 0 312 2 2145 105 10 20 chr5 20220100 20220396 -179409754 + AluSq SINE Alu 1 293 -20 21 36 0 0 chr5 20220411 20220439 -179409711 + AT_rich Low_complexity Low_complexity 1 28 0 340 273 98 74 chr5 20221219 20221375 -179408775 - Charlie8 DNA MER1_type -59 282 116 2053 125 3 3 chr5 20221375 20221664 -179408486 - AluSx SINE Alu -16 296 8 340 273 98 74 chr5 20221664 20221763 -179408387 - Charlie8 DNA MER1_type -225 116 21 184 165 0 38 chr5 20221905 20221984 -179408166 + (TATAA)n Simple_repeat Simple_repeat 2 77 0 283 0 0 0 chr5 20222370 20222405 -179407745 - L1MA8 LINE L1 -20 6271 6237 283 319 164 13 chr5 20223361 20223593 -179406557 - L1MC4a LINE L1 -1892 5916 5650 424 220 93 8 chr5 20223656 20223774 -179406376 + MIR SINE MIR 16 143 -65 250 278 0 0 chr5 20223836 20223890 -179406260 + polypyrimidine Low_complexity Low_complexity 2 55 0 2173 122 10 0 chr5 20224475 20224771 -179405379 - AluSx SINE Alu -13 299 1 642 158 0 0 chr5 20224931 20225026 -179405124 - Tigger7 DNA MER2_type -2 2485 2391 713 197 42 0 chr5 20225027 20225169 -179404981 - Tigger7 DNA MER2_type -285 265 118 426 227 62 0 chr5 20225285 20225382 -179404768 - Tigger7 DNA MER2_type -2384 103 1 215 73 49 0 chr5 20227636 20227677 -179402473 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 205 215 62 15 chr5 20227889 20227917 -179402233 - MIR SINE MIR 0 262 237 4607 63 10 0 chr5 20227917 20228500 -179401650 - L1PA14 LINE L1 0 6161 5573 205 215 62 15 chr5 20228500 20228536 -179401614 - MIR SINE MIR -25 237 195 1339 202 11 0 chr5 20228644 20228906 -179401244 + L1MB5 LINE L1 5660 5924 -250 892 152 21 0 chr5 20228910 20229055 -179401095 + L1MB5 LINE L1 6019 6166 -8 1980 139 0 20 chr5 20229065 20229397 -179400753 + AluSg SINE Alu 1 310 0 516 200 0 0 chr5 20229410 20229520 -179400630 + CT-rich Low_complexity Low_complexity 1 110 0 1684 153 75 14 chr5 20229521 20229815 -179400335 - AluJb SINE Alu 0 312 1 270 300 100 0 chr5 20229816 20229906 -179400244 + L2 LINE L2 3215 3313 0 1283 229 79 39 chr5 20229961 20230393 -179399757 - MLT2B1 LTR ERVL 0 414 3 2396 88 3 0 chr5 20230440 20230736 -179399414 - AluSq SINE Alu -16 297 1 274 291 0 13 chr5 20230956 20231035 -179399115 + MIR3 SINE MIR 103 180 -28 2162 128 0 0 chr5 20231329 20231619 -179398531 - AluSx SINE Alu -22 290 1 1174 127 1 7 chr5 20231714 20231904 -179398246 - pTR5 LTR ERV1 -2042 396 75 355 183 56 75 chr5 20231904 20232011 -179398139 - LTR30 LTR ERV1 -73 721 544 4051 158 100 26 chr5 20232011 20232935 -179397215 - pTR5 LTR ERV1 -413 2025 742 32 43 0 0 chr5 20233685 20233731 -179396419 + AT_rich Low_complexity Low_complexity 1 46 0 1814 117 18 15 chr5 20234173 20234447 -179395703 + AluSx SINE Alu 1 275 -37 1060 112 82 12 chr5 20234447 20234617 -179395533 + THE1B LTR MaLR 2 183 -181 2071 124 17 3 chr5 20234617 20234915 -179395235 + AluSq SINE Alu 1 302 -11 318 150 0 163 chr5 20234932 20234968 -179395182 + THE1B LTR MaLR 309 327 -48 2386 88 0 0 chr5 20234968 20235263 -179394887 - AluSc SINE Alu -14 295 1 318 150 0 163 chr5 20235263 20235306 -179394844 + THE1B LTR MaLR 327 375 0 1955 136 35 0 chr5 20236456 20236742 -179393408 - AluSx SINE Alu -16 296 1 569 220 90 40 chr5 20236793 20236970 -179393180 + MER5A DNA MER1_type 4 189 0 1308 218 85 13 chr5 20236978 20237294 -179392856 + MER58B DNA MER1_type 1 339 -2 304 181 60 43 chr5 20238727 20238843 -179391307 - L1MC4 LINE L1 0 8042 7925 290 204 11 34 chr5 20238843 20238931 -179391219 + (TCCA)n Simple_repeat Simple_repeat 1 86 0 2608 56 3 0 chr5 20238974 20239280 -179390870 + AluY SINE Alu 1 307 -4 1788 147 37 4 chr5 20239756 20240029 -179390121 - AluSx SINE Alu -30 282 1 1655 167 48 4 chr5 20240609 20240726 -179389424 + AluJb SINE Alu 1 111 -216 235 0 57 0 chr5 20240726 20240761 -179389389 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 1655 167 48 4 chr5 20240761 20240958 -179389192 + AluJb SINE Alu 111 327 0 2363 43 22 0 chr5 20241853 20242154 -179387996 - AluY SINE Alu 0 307 1 22 56 0 0 chr5 20242448 20242484 -179387666 + AT_rich Low_complexity Low_complexity 1 36 0 2602 44 0 0 chr5 20242486 20242780 -179387370 + AluY SINE Alu 1 294 -17 350 319 9 0 chr5 20244465 20244581 -179385569 - Charlie2 DNA MER1_type -838 2024 1908 1171 167 0 19 chr5 20244870 20245086 -179385064 + AluSx SINE Alu 3 214 -98 1257 259 87 65 chr5 20246250 20247233 -179382917 + L1M4b LINE L1 1350 2527 -4611 718 158 108 0 chr5 20247233 20247353 -179382797 + AluSx SINE Alu 2 134 -178 27557 133 13 14 chr5 20247354 20248572 -179381578 + L1PA8A LINE L1 5 1223 -5223 234 62 0 0 chr5 20248572 20248604 -179381546 + (CAA)n Simple_repeat Simple_repeat 2 33 0 27557 133 13 14 chr5 20248604 20253776 -179376374 + L1PA8A LINE L1 1223 6446 0 875 206 6 0 chr5 20253807 20253967 -179376183 + AluSx SINE Alu 121 281 -29 224 188 87 58 chr5 20254203 20254272 -179375878 + MIR SINE MIR 80 150 -112 2091 139 3 0 chr5 20254370 20254672 -179375478 - AluSq SINE Alu -10 303 1 2393 87 3 3 chr5 20255287 20255598 -179374552 + AluY SINE Alu 1 311 0 192 77 0 0 chr5 20255903 20255929 -179374221 + (TTA)n Simple_repeat Simple_repeat 1 26 0 485 324 104 5 chr5 20255933 20256155 -179373995 - MIR SINE MIR -8 254 11 210 245 128 75 chr5 20256200 20256294 -179373856 - MIR SINE MIR -92 116 18 329 247 0 13 chr5 20256386 20256463 -179373687 - MLT1F1 LTR MaLR -450 117 42 1969 164 48 8 chr5 20256463 20256694 -179373456 - L1MC3 LINE L1 -695 7090 6837 3110 107 9 24 chr5 20256694 20257161 -179372989 - L1PA15 LINE L1 0 6165 5706 1969 164 48 8 chr5 20257161 20257301 -179372849 - L1MC3 LINE L1 -948 6837 6704 550 270 53 11 chr5 20257331 20257520 -179372630 + L1ME3A LINE L1 5964 6160 -10 186 103 0 0 chr5 20257535 20257564 -179372586 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 328 280 68 34 chr5 20257601 20257719 -179372431 + MIR SINE MIR 45 166 -96 209 219 0 16 chr5 20257791 20257820 -179372330 + (TA)n Simple_repeat Simple_repeat 2 30 -34 2759 220 31 32 chr5 20257820 20258474 -179371676 - MER82 DNA MER2_type 0 653 1 209 219 0 16 chr5 20258474 20258508 -179371642 + (TA)n Simple_repeat Simple_repeat 30 64 0 183 245 102 0 chr5 20258705 20258754 -179371396 - L2 LINE L2 -65 3248 3195 834 309 39 21 chr5 20260069 20260457 -179369693 + LTR16B LTR ERVL 66 460 -4 330 348 18 9 chr5 20261346 20261458 -179368692 + MIR SINE MIR 18 130 -78 264 161 0 32 chr5 20261877 20261939 -179368211 + L1MC4 LINE L1 6646 6705 -1337 207 229 0 0 chr5 20261939 20262000 -179368150 + (CATATA)n Simple_repeat Simple_repeat 6 66 0 25 51 0 0 chr5 20262045 20262084 -179368066 + AT_rich Low_complexity Low_complexity 1 39 0 210 143 0 0 chr5 20262391 20262426 -179367724 + (A)n Simple_repeat Simple_repeat 1 35 0 1592 126 3 86 chr5 20262967 20263110 -179367040 + LTR8 LTR ERV1 1 154 -537 2474 70 0 0 chr5 20263110 20263410 -179366740 - AluY SINE Alu -11 300 1 8021 62 4 2 chr5 20263410 20265151 -179364999 - L1PA6 LINE L1 -6 6148 4405 1592 126 3 86 chr5 20265151 20265308 -179364842 + LTR8 LTR ERV1 152 277 -414 874 115 43 14 chr5 20265327 20265466 -179364684 + LTR8 LTR ERV1 549 691 0 180 154 0 0 chr5 20265571 20265597 -179364553 + MER5A DNA MER1_type 1 26 -163 4025 138 19 12 chr5 20265598 20266050 -179364100 + L1PA16 LINE L1 5524 5984 -182 2062 134 0 0 chr5 20266050 20266391 -179363759 + AluSx SINE Alu 1 341 0 4025 138 19 12 chr5 20266391 20266575 -179363575 + L1PA16 LINE L1 5984 6165 -1 761 238 24 0 chr5 20266581 20266745 -179363405 + MER5A DNA MER1_type 11 178 -11 204 294 73 0 chr5 20266847 20266915 -179363235 - MIR SINE MIR -64 144 72 327 49 0 0 chr5 20267286 20267327 -179362823 + (TG)n Simple_repeat Simple_repeat 1 41 0 1968 136 37 0 chr5 20268833 20269128 -179361022 - AluSx SINE Alu -6 306 1 1696 191 3 7 chr5 20269133 20269437 -179360713 - AluJb SINE Alu -9 303 1 191 227 0 0 chr5 20270658 20270702 -179359448 + L2 LINE L2 3270 3313 0 1461 158 31 15 chr5 20272289 20272549 -179357601 + L1MC1 LINE L1 6070 6333 0 24 77 0 0 chr5 20273673 20273725 -179356425 + AT_rich Low_complexity Low_complexity 1 52 0 527 248 55 14 chr5 20273811 20273956 -179356194 + L1ME1 LINE L1 6011 6161 -5 2795 96 3 0 chr5 20274226 20274580 -179355570 - THE1A LTR MaLR 0 355 1 2319 74 0 0 chr5 20274710 20275031 -179355119 + AluY SINE Alu 1 321 0 2046 231 13 18 chr5 20275037 20275487 -179354663 - LTR40b LTR ERVL -14 448 1 206 333 131 0 chr5 20276113 20276212 -179353938 + L2 LINE L2 3161 3272 0 4222 125 49 29 chr5 20276246 20276965 -179353185 + L1MA8 LINE L1 5542 6274 -17 297 0 0 0 chr5 20278473 20278506 -179351644 + (CA)n Simple_repeat Simple_repeat 1 33 0 541 338 96 39 chr5 20278508 20279144 -179351006 + L2 LINE L2 339 1010 -2304 327 370 39 8 chr5 20279387 20279514 -179350636 + L2 LINE L2 3134 3264 -8 237 209 0 0 chr5 20279514 20279557 -179350593 + (CA)n Simple_repeat Simple_repeat 1 43 0 180 0 0 0 chr5 20280873 20280893 -179349257 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2559 164 58 14 chr5 20281861 20282415 -179347735 - LTR1 LTR ERV1 0 785 208 2130 130 0 13 chr5 20282523 20282824 -179347326 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 20282882 20282903 -179347247 + AT_rich Low_complexity Low_complexity 1 21 0 1859 160 0 14 chr5 20282909 20283202 -179346948 - AluJb SINE Alu -23 289 1 2339 206 47 30 chr5 20283260 20283826 -179346324 - L1MB8 LINE L1 0 6178 5600 2214 117 0 3 chr5 20283826 20284126 -179346024 - AluSq SINE Alu -14 299 1 2339 206 47 30 chr5 20284126 20284157 -179345993 - L1MB8 LINE L1 -578 5600 5571 2323 157 100 25 chr5 20285146 20285177 -179344973 + MLT1D LTR MaLR 1 28 -477 306 0 0 0 chr5 20285177 20285211 -179344939 + (CA)n Simple_repeat Simple_repeat 1 34 0 2323 157 100 25 chr5 20285211 20285649 -179344501 + MLT1D LTR MaLR 28 505 0 2030 142 3 7 chr5 20286539 20286842 -179343308 + AluSx SINE Alu 1 302 -10 269 297 42 68 chr5 20288126 20288244 -179341906 + MER102a DNA MER1_type 213 327 -3 1005 178 91 17 chr5 20288440 20288670 -179341480 + L1M4 LINE L1 5321 5567 -607 804 183 27 27 chr5 20288741 20288927 -179341223 - MER5A DNA MER1_type -3 186 1 545 290 107 34 chr5 20288941 20289269 -179340881 - MLT1I LTR MaLR -57 352 1 242 106 21 0 chr5 20289694 20289741 -179340409 + (TCCC)n Simple_repeat Simple_repeat 4 51 0 26 0 0 0 chr5 20290699 20290725 -179339425 + AT_rich Low_complexity Low_complexity 1 26 0 441 255 57 126 chr5 20291135 20291304 -179338846 + MIR SINE MIR 33 212 -50 1939 83 0 30 chr5 20291304 20291592 -179338558 + AluSg SINE Alu 24 303 0 441 255 57 126 chr5 20291592 20291644 -179338506 + MIR SINE MIR 212 239 -23 2280 138 11 8 chr5 20291644 20291998 -179338152 + THE1A LTR MaLR 1 355 0 441 255 57 126 chr5 20291998 20292021 -179338129 + MIR SINE MIR 239 262 0 2250 117 3 3 chr5 20292359 20292667 -179337483 + AluSq SINE Alu 1 308 -5 782 192 13 13 chr5 20292949 20293100 -179337050 + LTR23 LTR ERV1 1 151 -286 741 197 42 104 chr5 20293177 20293410 -179336740 + LTR56 LTR ERV1 167 380 -57 2207 134 3 0 chr5 20293410 20293715 -179336435 - AluSx SINE Alu -6 306 1 741 197 42 104 chr5 20293715 20293770 -179336380 + LTR56 LTR ERV1 380 437 0 1279 177 5 5 chr5 20293810 20294030 -179336120 + MLT2B2 LTR ERVL 1 220 -295 477 270 23 46 chr5 20294034 20294222 -179335928 - MER93b LTR ERV1 -4 399 192 1443 201 5 19 chr5 20294357 20294716 -179335434 + MLT2B1 LTR ERVL 211 520 0 2238 127 33 28 chr5 20294738 20295100 -179335050 - THE1B LTR MaLR 0 364 1 207 211 0 0 chr5 20295755 20295793 -179334357 + GA-rich Low_complexity Low_complexity 3 40 0 1502 186 25 14 chr5 20296731 20297006 -179333144 - AluJo SINE Alu -30 282 5 2484 120 8 19 chr5 20297102 20297470 -179332680 - THE1B LTR MaLR 0 364 1 1353 215 46 70 chr5 20298278 20298788 -179331362 - MLT1F1 LTR MaLR -71 496 1 343 285 118 68 chr5 20299072 20299412 -179330738 - MLT1K LTR MaLR -36 552 196 2099 110 7 4 chr5 20299690 20300087 -179330063 - AluSx SINE Alu 0 398 1 368 194 0 0 chr5 20300634 20300696 -179329454 + AluJ/FRAM SINE Alu 222 283 -19 327 25 0 0 chr5 20300909 20300949 -179329201 + (TG)n Simple_repeat Simple_repeat 1 40 0 210 245 0 0 chr5 20301739 20301788 -179328362 - L2 LINE L2 0 3313 3265 547 305 110 40 chr5 20301916 20302294 -179327856 - L2 LINE L2 -212 3060 2652 1783 122 108 11 chr5 20302294 20302573 -179327577 + AluSx SINE Alu 1 306 -6 547 305 110 40 chr5 20302573 20302617 -179327533 - L2 LINE L2 -620 2652 2612 1923 163 8 58 chr5 20302749 20303056 -179327094 - MLT1A1 LTR MaLR -1 364 78 2351 93 3 10 chr5 20303056 20303366 -179326784 + AluSc SINE Alu 2 309 0 1923 163 8 58 chr5 20303366 20303439 -179326711 - MLT1A1 LTR MaLR -287 78 3 239 198 71 71 chr5 20303461 20303587 -179326563 + Charlie7 DNA MER1_type 2453 2578 -34 1395 188 86 0 chr5 20303587 20303704 -179326446 + AluJo SINE Alu 5 111 -201 297 0 0 0 chr5 20303704 20303737 -179326413 + (TAA)n Simple_repeat Simple_repeat 2 34 0 1395 188 86 0 chr5 20303737 20303875 -179326275 + AluJo SINE Alu 111 282 -30 255 283 53 0 chr5 20303979 20304092 -179326058 - L2 LINE L2 -706 2608 2490 2707 123 34 5 chr5 20304673 20305023 -179325127 + MSTA LTR MaLR 1 366 -62 2109 117 30 3 chr5 20305023 20305323 -179324827 - AluSg SINE Alu -2 308 1 2707 123 34 5 chr5 20305323 20305388 -179324762 + MSTA LTR MaLR 366 428 0 491 88 0 15 chr5 20306225 20306293 -179323857 + 7SK RNA RNA 127 193 0 2212 101 3 10 chr5 20306449 20306747 -179323403 - AluSp SINE Alu -17 296 1 2241 125 3 0 chr5 20306773 20307076 -179323074 + AluSx SINE Alu 1 304 -8 1972 191 58 25 chr5 20307533 20307982 -179322168 - MLT1D LTR MaLR -41 464 1 263 49 0 73 chr5 20308002 20308043 -179322107 + LTR67 LTR ERVL 102 139 -418 * 747 162 111 79 chr5 20308034 20308120 -179322030 + MER96B DNA MER1_type? 9 91 -326 2160 135 0 0 chr5 20308120 20308417 -179321733 - AluSx SINE Alu -15 297 1 747 162 111 79 chr5 20308417 20308546 -179321604 + MER96B DNA MER1_type? 91 231 -186 339 331 52 7 chr5 20308787 20308941 -179321209 + LTR67 LTR ERVL 394 554 -3 2283 100 3 13 chr5 20309085 20309395 -179320755 + AluSx SINE Alu 5 311 -1 575 148 0 9 chr5 20310708 20310816 -179319334 + (TTCC)n Simple_repeat Simple_repeat 4 110 0 228 89 0 54 chr5 20310861 20310917 -179319233 + (TTTC)n Simple_repeat Simple_repeat 1 53 0 1292 191 12 8 chr5 20310940 20311192 -179318958 - AluJb SINE Alu -1 311 59 227 211 66 26 chr5 20311360 20311436 -179318714 - LTR33A LTR ERVL -6 517 439 829 136 0 0 chr5 20311993 20312111 -179318039 + FLAM_C SINE Alu 1 118 -25 27 0 0 0 chr5 20312111 20312138 -179318012 + AT_rich Low_complexity Low_complexity 1 27 0 527 331 83 28 chr5 20312189 20312624 -179317526 - L2 LINE L2 -44 3269 2811 1838 150 0 0 chr5 20313359 20313481 -179316669 + AluJb SINE Alu 1 122 -190 298 0 48 0 chr5 20313481 20313523 -179316627 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1838 150 0 0 chr5 20313523 20313680 -179316470 + AluJb SINE Alu 121 280 -32 214 196 22 0 chr5 20315293 20315339 -179314811 + L2 LINE L2 3214 3260 -12 2216 109 0 0 chr5 20315438 20315751 -179314399 - AluSq SINE Alu 0 313 1 307 236 136 26 chr5 20315880 20316071 -179314079 - L1MC5 LINE L1 -210 7751 7540 2421 122 25 0 chr5 20316141 20316494 -179313656 + THE1B LTR MaLR 3 364 0 956 116 102 0 chr5 20316654 20316801 -179313349 - THE1B LTR MaLR -202 162 1 209 160 0 40 chr5 20316802 20316852 -179313298 + (CATA)n Simple_repeat Simple_repeat 4 51 0 1348 155 28 1 chr5 20316873 20317154 -179312996 - MLT2C2 LTR ERVL -67 330 1 2170 120 6 19 chr5 20317444 20317760 -179312390 + AluSx SINE Alu 1 312 0 4699 121 10 0 chr5 20317878 20318565 -179311585 - L1PA15 LINE L1 -4 6161 5468 1731 210 9 9 chr5 20318876 20319219 -179310931 + MLT2C1 LTR ERVL 3 345 -52 216 184 0 0 chr5 20319224 20319262 -179310888 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 253 152 22 0 chr5 20319274 20319320 -179310830 + MLT2C1 LTR ERVL 350 396 -1 276 211 0 13 chr5 20319686 20319762 -179310388 + (TA)n Simple_repeat Simple_repeat 1 75 0 2881 161 59 51 chr5 20321367 20321974 -179308176 - LTR9 LTR ERV1 0 612 1 1732 113 0 0 chr5 20322335 20322565 -179307585 - AluSx SINE Alu -17 295 66 1041 176 111 111 chr5 20322565 20323007 -179307143 - LTR7 LTR ERV1 -7 443 2 527 115 0 13 chr5 20323007 20323085 -179307065 - AluSx SINE Alu -235 78 2 1094 208 253 5 chr5 20323438 20323813 -179306337 + MER110 LTR ERV1 10 477 -14 1662 172 3 27 chr5 20324070 20324367 -179305783 + AluJo SINE Alu 1 290 -22 2130 118 0 26 chr5 20324367 20324671 -179305479 - AluSx SINE Alu -16 296 1 35 0 0 0 chr5 20324677 20324712 -179305438 + AT_rich Low_complexity Low_complexity 1 35 0 458 300 70 30 chr5 20325146 20325254 -179304896 - L1ME4a LINE L1 -279 5842 5740 195 42 0 0 chr5 20325254 20325278 -179304872 + (TA)n Simple_repeat Simple_repeat 2 25 0 458 300 70 30 chr5 20325278 20325439 -179304711 - L1ME4a LINE L1 -381 5740 5562 491 288 121 68 chr5 20326321 20326912 -179303238 - L2 LINE L2 -38 3275 2633 2267 96 3 0 chr5 20326912 20327205 -179302945 + AluSx SINE Alu 8 301 -11 491 288 121 68 chr5 20327205 20327312 -179302838 - L2 LINE L2 -680 2633 2533 1913 226 79 92 chr5 20327315 20327377 -179302773 - MER21B LTR ERV1 -75 788 727 180 0 0 0 chr5 20327377 20327397 -179302753 + (CAATT)n Simple_repeat Simple_repeat 2 21 0 1913 226 79 92 chr5 20327397 20328131 -179302019 - MER21B LTR ERV1 -136 727 2 2133 113 10 0 chr5 20329248 20329539 -179300611 - AluSx SINE Alu -18 294 1 236 224 37 84 chr5 20329861 20329968 -179300182 + Charlie7 DNA MER1_type 3 104 -2508 227 253 105 11 chr5 20330151 20330246 -179299904 - MER5A DNA MER1_type -43 146 43 2130 127 3 3 chr5 20330255 20330562 -179299588 - AluSx SINE Alu -5 307 1 1878 160 0 29 chr5 20330562 20330868 -179299282 - AluJo SINE Alu -15 297 1 662 322 34 39 chr5 20331378 20331735 -179298415 + Charlie2 DNA MER1_type 10 364 -2418 810 183 70 111 chr5 20331738 20331841 -179298309 + Charlie2 DNA MER1_type 2231 2337 -525 2225 110 3 16 chr5 20331841 20332151 -179297999 - AluSx SINE Alu -6 306 1 810 183 70 111 chr5 20332151 20332432 -179297718 + Charlie2 DNA MER1_type 2337 2597 -265 1648 168 56 11 chr5 20332432 20332718 -179297432 - AluJo SINE Alu -13 299 1 810 183 70 111 chr5 20332718 20332774 -179297376 + Charlie2 DNA MER1_type 2597 2654 -208 7531 20 13 0 chr5 20332817 20333683 -179296467 - L1PA4 LINE L1 -1 6154 5278 483 131 0 65 chr5 20333683 20333790 -179296360 + Charlie2 DNA MER1_type 2694 2793 -69 233 163 20 0 chr5 20335741 20335790 -179294360 + CT-rich Low_complexity Low_complexity 6 55 0 6921 60 42 3 chr5 20336271 20337353 -179292797 - L1PA7 LINE L1 0 6154 5062 2006 125 4 4 chr5 20337353 20337634 -179292516 - AluSx SINE Alu -31 281 1 6921 60 42 3 chr5 20337634 20337672 -179292478 - L1PA7 LINE L1 -1092 5062 5027 2134 125 0 3 chr5 20338003 20338298 -179291852 - AluSx SINE Alu -18 294 1 512 272 10 41 chr5 20338313 20338508 -179291642 + L2 LINE L2 3116 3304 -9 255 300 50 10 chr5 20341575 20341675 -179288475 - MIR3 SINE MIR -24 184 81 2027 130 0 7 chr5 20341931 20342215 -179287935 + AluSx SINE Alu 1 282 -30 1743 244 58 50 chr5 20342393 20342979 -179287171 + MLT1E LTR MaLR 1 591 -2 240 190 69 0 chr5 20343346 20343404 -179286746 - MIR SINE MIR -77 185 124 2247 116 3 0 chr5 20343521 20343815 -179286335 + AluSx SINE Alu 1 295 -17 249 139 0 0 chr5 20344566 20344609 -179285541 + (CCAA)n Simple_repeat Simple_repeat 2 44 0 458 274 186 51 chr5 20345090 20345462 -179284688 + L2 LINE L2 1138 1559 -1755 1675 283 82 13 chr5 20345486 20346034 -179284116 + MLT1E LTR MaLR 4 589 -4 1261 175 62 19 chr5 20346122 20346431 -179283719 - MER33 DNA MER1_type -2 322 1 2155 103 3 13 chr5 20346449 20346749 -179283401 + AluSq SINE Alu 1 297 -16 1997 141 10 0 chr5 20346786 20347092 -179283058 - AluSx SINE Alu 0 312 4 875 141 0 8 chr5 20347132 20347260 -179282890 + FLAM_C SINE Alu 2 128 -5 393 117 0 0 chr5 20347260 20347320 -179282830 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 2080 131 3 0 chr5 20348551 20348841 -179281309 - AluSq SINE Alu -22 291 1 22 0 0 0 chr5 20348841 20348863 -179281287 + AT_rich Low_complexity Low_complexity 1 22 0 1927 153 0 3 chr5 20348863 20349151 -179280999 - AluSx SINE Alu -25 287 1 345 232 56 136 chr5 20349398 20349648 -179280502 + MLT1J LTR MaLR 226 455 -56 2124 136 7 0 chr5 20349783 20350091 -179280059 - AluSx SINE Alu -2 310 1 406 265 66 29 chr5 20350658 20350794 -179279356 - L1ME LINE L1 -5924 146 6 293 322 131 0 chr5 20350807 20350907 -179279243 - MIR SINE MIR -2 260 174 221 81 0 27 chr5 20350907 20350944 -179279206 + (CAT)n Simple_repeat Simple_repeat 2 37 0 293 322 131 0 chr5 20350944 20351026 -179279124 - MIR SINE MIR -88 174 54 2264 90 19 26 chr5 20351050 20351362 -179278788 - AluSg SINE Alu 0 310 1 2191 82 3 0 chr5 20351362 20351644 -179278506 - AluY SINE Alu -28 283 1 578 291 11 34 chr5 20351684 20351863 -179278287 - MER5B DNA MER1_type 0 178 4 273 29 0 0 chr5 20353414 20353448 -179276702 + (TG)n Simple_repeat Simple_repeat 2 35 0 198 71 0 0 chr5 20353968 20353996 -179276154 + (TG)n Simple_repeat Simple_repeat 2 29 0 388 349 31 5 chr5 20354805 20355000 -179275150 + MIR SINE MIR 57 256 -6 6600 128 28 16 chr5 20355860 20357337 -179272813 + L1MA3 LINE L1 4810 6305 0 1719 170 7 14 chr5 20357355 20357644 -179272506 + AluJo SINE Alu 3 289 -23 11610 166 5 27 chr5 20357748 20360388 -179269762 + L1PA14 LINE L1 3373 5947 -214 1917 153 14 7 chr5 20360388 20360682 -179269468 + AluSx SINE Alu 1 296 -16 11610 166 5 27 chr5 20360682 20360892 -179269258 + L1PA14 LINE L1 5947 6160 -1 1962 129 24 7 chr5 20360961 20361256 -179268894 + AluSx SINE Alu 1 300 -12 255 59 0 0 chr5 20361291 20361325 -179268825 + Alu SINE Alu 260 293 -7 226 67 0 0 chr5 20361361 20361391 -179268759 + Alu SINE Alu 259 288 -11 266 213 37 19 chr5 20361417 20361525 -179268625 + (TATAA)n Simple_repeat Simple_repeat 5 114 0 742 241 41 24 chr5 20362039 20362209 -179267941 + MER45A DNA AcHobo 5 177 -1 859 232 61 52 chr5 20362617 20362945 -179267205 - MLT1C LTR MaLR 0 467 137 2306 107 3 7 chr5 20363067 20363376 -179266774 + AluSp SINE Alu 1 308 -5 2173 89 34 3 chr5 20364496 20364787 -179265363 + AluSg SINE Alu 1 300 -10 181 315 127 61 chr5 20364907 20365316 -179264834 - L2 LINE L2 -1423 1891 1456 320 230 30 30 chr5 20365358 20365458 -179264692 - L1MC4 LINE L1 -1339 6703 6604 207 127 55 18 chr5 20365458 20365513 -179264637 + (TA)n Simple_repeat Simple_repeat 1 57 0 37 62 0 0 chr5 20365736 20365801 -179264349 + AT_rich Low_complexity Low_complexity 1 65 0 197 108 27 0 chr5 20365893 20365930 -179264220 + (CA)n Simple_repeat Simple_repeat 2 39 0 27 29 0 0 chr5 20366877 20366911 -179263239 + AT_rich Low_complexity Low_complexity 1 34 0 25 0 0 0 chr5 20367272 20367297 -179262853 + AT_rich Low_complexity Low_complexity 1 25 0 1313 180 3 113 chr5 20367586 20367913 -179262237 - AluSp SINE Alu -10 303 13 336 218 127 9 chr5 20367982 20368092 -179262058 - Charlie7 DNA MER1_type -2465 147 25 25 31 0 0 chr5 20368932 20368964 -179261186 + AT_rich Low_complexity Low_complexity 1 32 0 866 219 77 48 chr5 20369256 20369671 -179260479 - Charlie2 DNA MER1_type -32 2830 2404 331 295 31 8 chr5 20369840 20369969 -179260181 + MLT1E3 LTR MaLR 1 132 -522 480 286 91 42 chr5 20370212 20370565 -179259585 + MLT1E3 LTR MaLR 255 624 0 2404 78 0 3 chr5 20372145 20372439 -179257711 - AluY SINE Alu -18 293 1 234 316 0 0 chr5 20374427 20374503 -179255647 - Charlie2a DNA MER1_type -1125 1737 1662 235 308 58 25 chr5 20376511 20376631 -179253519 - MLT1E3 LTR MaLR -346 278 155 3686 207 32 32 chr5 20377152 20378537 -179251613 - L1MA8 LINE L1 -178 6113 4723 413 303 20 13 chr5 20378561 20378713 -179251437 - L1MCa LINE L1 -6268 158 6 28 29 0 0 chr5 20378890 20378925 -179251225 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 20379192 20379215 -179250935 + AT_rich Low_complexity Low_complexity 1 23 0 1039 244 70 15 chr5 20379582 20379853 -179250297 - AluJb SINE Alu -16 286 1 208 146 0 55 chr5 20380828 20380883 -179249267 + (CACAA)n Simple_repeat Simple_repeat 4 55 0 845 108 0 0 chr5 20381056 20381167 -179248983 - AluSq/x SINE Alu -202 111 1 1695 175 0 10 chr5 20381390 20381707 -179248443 + AluSx SINE Alu 3 316 0 239 247 65 11 chr5 20381912 20382005 -179248145 + MLT1E3 LTR MaLR 12 109 -545 556 277 118 45 chr5 20382061 20382483 -179247667 + MLT1E3 LTR MaLR 172 624 0 4684 104 9 0 chr5 20385335 20385999 -179244151 - L1PA8 LINE L1 -36 6136 5467 216 115 58 19 chr5 20387914 20387966 -179242184 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 1402 262 9 5 chr5 20388127 20388489 -179241661 - L1MC1 LINE L1 -17 6316 5961 4579 199 40 25 chr5 20388515 20390028 -179240122 - L1MA8 LINE L1 -25 6266 4727 268 331 27 14 chr5 20390061 20390209 -179239941 - L1MCa LINE L1 -6271 155 6 1114 271 29 4 chr5 20391072 20391353 -179238797 - AluJb SINE Alu -14 288 1 1234 266 16 16 chr5 20392461 20392844 -179237306 - L1MC1 LINE L1 -5 6328 5946 4097 201 31 50 chr5 20392863 20394125 -179236025 - L1MA8 LINE L1 -26 6265 5032 1221 240 0 24 chr5 20394992 20395284 -179234866 - AluJb SINE Alu -23 289 5 2078 122 7 7 chr5 20397369 20397664 -179232486 + AluSc SINE Alu 1 295 -14 339 236 34 11 chr5 20398083 20398172 -179231978 - L1PB3 LINE L1 0 6154 6064 4085 183 35 26 chr5 20398375 20399339 -179230811 - L1PB3 LINE L1 -27 6127 5157 1603 195 3 0 chr5 20400362 20400644 -179229506 - AluJb SINE Alu -29 283 1 244 203 153 17 chr5 20400710 20400828 -179229322 - Charlie7 DNA MER1_type -2456 156 23 804 156 8 0 chr5 20401182 20401310 -179228840 - AluSq/x SINE Alu -183 129 1 1461 207 3 13 chr5 20401534 20401834 -179228316 + AluSx SINE Alu 3 299 -13 229 278 41 0 chr5 20402082 20402179 -179227971 + MLT1E3 LTR MaLR 7 107 -547 443 249 89 69 chr5 20402305 20402666 -179227484 + MLT1E3 LTR MaLR 257 624 0 365 310 9 0 chr5 20404570 20404686 -179225464 - Charlie2 DNA MER1_type -838 2024 1908 1658 174 0 13 chr5 20404975 20405286 -179224864 + AluSx SINE Alu 3 309 -3 439 249 89 69 chr5 20405738 20406099 -179224051 + MLT1E3 LTR MaLR 257 624 0 241 267 11 11 chr5 20406367 20406457 -179223693 - L1MEc LINE L1 -5520 876 787 369 174 230 83 chr5 20406856 20406920 -179223230 + MER20B DNA MER1_type 475 528 -255 2754 133 26 12 chr5 20406920 20407342 -179222808 + MSTA LTR MaLR 1 428 0 369 174 230 83 chr5 20407342 20407505 -179222645 + MER20B DNA MER1_type 528 736 -47 273 208 0 0 chr5 20407505 20407558 -179222592 + MER116 DNA Mariner 1 53 -27 888 146 0 28 chr5 20408197 20408341 -179221809 + FLAM_C SINE Alu 4 143 0 450 285 87 49 chr5 20409585 20410140 -179220010 + L1MEc LINE L1 787 1362 -5034 2038 123 41 0 chr5 20410540 20410833 -179219317 - AluSq SINE Alu -8 305 1 189 184 26 0 chr5 20411045 20411083 -179219067 - MIR SINE MIR -6 256 218 * 195 225 25 0 chr5 20411049 20411089 -179219061 - L2 LINE L2 -16 3256 3216 * 203 162 27 0 chr5 20411058 20411095 -179219055 + L2 LINE L2 1242 1279 -2035 2214 114 0 0 chr5 20412081 20412387 -179217763 + AluSc SINE Alu 1 306 -3 611 334 93 25 chr5 20413822 20414298 -179215852 + L2 LINE L2 2638 3163 -150 2029 159 0 0 chr5 20414298 20414599 -179215551 - AluSx SINE Alu -11 301 1 611 334 93 25 chr5 20414599 20414739 -179215411 + L2 LINE L2 3163 3292 -21 2055 151 40 57 chr5 20414839 20415210 -179214940 + MER47A DNA MER2_type 1 365 -1 189 74 0 0 chr5 20415211 20415238 -179214912 + (TC)n Simple_repeat Simple_repeat 2 28 0 * 380 156 0 13 chr5 20415237 20415314 -179214836 + (TA)n Simple_repeat Simple_repeat 1 76 0 276 30 0 0 chr5 20415344 20415377 -179214773 + (TG)n Simple_repeat Simple_repeat 1 33 0 208 122 0 49 chr5 20416156 20416197 -179213953 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 375 331 19 38 chr5 20417477 20417634 -179212516 - MIR SINE MIR -108 154 1 1564 178 31 14 chr5 20417680 20417973 -179212177 + AluSx SINE Alu 6 303 -9 539 116 0 21 chr5 20417973 20418068 -179212082 + (GGGGA)n Simple_repeat Simple_repeat 2 94 0 1167 120 6 0 chr5 20418094 20418252 -179211898 - AluSx SINE Alu -153 159 1 228 216 27 54 chr5 20418478 20418552 -179211598 + GA-rich Low_complexity Low_complexity 4 75 0 506 227 39 121 chr5 20418610 20418997 -179211153 - L1MC4 LINE L1 0 8042 7688 203 333 11 0 chr5 20421983 20422076 -179208074 + GA-rich Low_complexity Low_complexity 1 94 0 1744 142 35 48 chr5 20422455 20422766 -179207384 + AluJo SINE Alu 1 307 -5 498 335 107 5 chr5 20422870 20423067 -179207083 - MIR SINE MIR -2 260 44 231 343 71 52 chr5 20424066 20424276 -179205874 - MIR SINE MIR -2 260 47 735 269 165 35 chr5 20425962 20426691 -179203459 + L2 LINE L2 2483 3310 -3 669 267 0 0 chr5 20427608 20427728 -179202422 + FLAM_A SINE Alu 1 120 -13 22 43 0 21 chr5 20427734 20427765 -179202385 + AT_rich Low_complexity Low_complexity 1 32 -14 1691 152 11 11 chr5 20427765 20428034 -179202116 + AluJb SINE Alu 17 285 -27 22 43 0 21 chr5 20428034 20428049 -179202101 + AT_rich Low_complexity Low_complexity 32 46 0 216 226 0 38 chr5 20428054 20428107 -179202043 + MIR SINE MIR 212 262 0 22 35 0 0 chr5 20428330 20428359 -179201791 + AT_rich Low_complexity Low_complexity 1 29 0 450 0 0 0 chr5 20428544 20428594 -179201556 + (AATAG)n Simple_repeat Simple_repeat 1 50 0 2494 83 3 0 chr5 20428605 20428917 -179201233 + AluSp SINE Alu 1 313 0 272 306 19 102 chr5 20429490 20429696 -179200454 - MLT1L LTR MaLR -204 411 223 348 305 46 15 chr5 20432822 20432953 -179197197 + MIR3 SINE MIR 33 167 -41 1832 132 189 11 chr5 20434150 20434521 -179195629 - LTR23 LTR ERV1 0 437 1 327 231 0 0 chr5 20435192 20435326 -179194824 + (TG)n Simple_repeat Simple_repeat 2 135 0 240 138 73 0 chr5 20435662 20435771 -179194379 + (TTATA)n Simple_repeat Simple_repeat 4 120 0 180 152 0 0 chr5 20435979 20436012 -179194138 + T-rich Low_complexity Low_complexity 3 35 0 2251 166 54 29 chr5 20437800 20438246 -179191904 - MLT1C LTR MaLR -10 457 1 2093 108 31 0 chr5 20438427 20438714 -179191436 + AluSg SINE Alu 1 296 -14 2826 125 31 7 chr5 20438748 20439165 -179190985 + MSTA LTR MaLR 1 427 -1 272 212 0 45 chr5 20439454 20439520 -179190630 + MLT1K LTR MaLR 49 111 -456 2633 209 22 24 chr5 20439520 20439805 -179190345 + L1MD3 LINE L1 7403 7687 -308 1943 136 0 52 chr5 20439805 20440115 -179190035 + AluSx SINE Alu 1 294 -18 2633 209 22 24 chr5 20440115 20440423 -179189727 + L1MD3 LINE L1 7687 7995 0 997 229 9 9 chr5 20441282 20441500 -179188650 - MLT2B1 LTR ERVL -300 220 3 559 276 114 14 chr5 20441504 20441714 -179188436 + MLT1K LTR MaLR 75 305 -244 1745 194 7 3 chr5 20442008 20442318 -179187832 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr5 20442515 20442536 -179187614 + AT_rich Low_complexity Low_complexity 1 21 0 1774 144 81 11 chr5 20443584 20443868 -179186282 - AluJb SINE Alu -8 304 1 237 352 74 0 chr5 20443937 20444045 -179186105 - L2 LINE L2 -6 3307 3192 593 271 107 20 chr5 20444670 20444914 -179185236 + MLT1K LTR MaLR 322 586 -2 380 237 59 41 chr5 20445069 20445238 -179184912 + HAL1b LINE L1 663 834 -514 2066 70 0 79 chr5 20445394 20445428 -179184722 - AluY SINE Alu -1 310 275 2208 65 0 81 chr5 20445428 20445750 -179184400 - AluY SINE Alu 0 311 16 2066 70 0 79 chr5 20445750 20446030 -179184120 - AluY SINE Alu -36 275 21 2326 45 0 21 chr5 20446031 20446319 -179183831 - AluY SINE Alu -29 282 1 1002 229 69 28 chr5 20646492 20646854 -178983296 + L1MC3 LINE L1 4619 4995 -1151 1377 228 3 13 chr5 20646874 20647177 -178982973 + AluJo SINE Alu 12 311 -1 2672 219 101 32 chr5 20647181 20648350 -178981800 + L1MC3 LINE L1 5000 5395 -751 258 301 7 21 chr5 20648387 20648530 -178981620 + L1M4 LINE L1 4559 4699 -1447 830 250 88 45 chr5 20648601 20649076 -178981074 + L1M4 LINE L1 2938 3448 -2698 2197 103 6 13 chr5 20649076 20649388 -178980762 + AluSg SINE Alu 1 310 0 830 250 88 45 chr5 20649388 20649551 -178980599 + L1M4 LINE L1 3448 3603 -2543 2254 95 89 11 chr5 20649832 20650180 -178979970 + THE1C LTR MaLR 1 375 0 21 57 0 0 chr5 20650243 20650278 -178979872 + AT_rich Low_complexity Low_complexity 1 35 0 31 92 0 0 chr5 20651363 20651450 -178978700 + AT_rich Low_complexity Low_complexity 1 87 0 1224 217 38 28 chr5 20652866 20653184 -178976966 + L1MB4 LINE L1 5860 6180 0 1557 209 67 35 chr5 20653185 20653765 -178976385 + L1MC5 LINE L1 7326 7924 -37 918 237 23 47 chr5 20654006 20654306 -178975844 - L1ME LINE L1 -420 5746 5454 1908 144 3 3 chr5 20654421 20654713 -178975437 - AluSx SINE Alu -20 292 1 183 129 0 0 chr5 20654769 20654800 -178975350 + (TG)n Simple_repeat Simple_repeat 2 32 0 246 135 0 0 chr5 20654802 20654839 -178975311 + MLT2D LTR ERVL 378 414 0 2719 22 0 0 chr5 20654894 20655205 -178974945 + AluY SINE Alu 1 311 0 1732 128 99 0 chr5 20655674 20655947 -178974203 - AluSx SINE Alu -7 305 6 372 309 21 0 chr5 20656003 20656100 -178974050 - MLT1G1 LTR MaLR -421 174 76 26 0 0 0 chr5 20657496 20657522 -178972628 + AT_rich Low_complexity Low_complexity 1 26 0 35 24 0 0 chr5 20658123 20658165 -178971985 + AT_rich Low_complexity Low_complexity 1 42 0 205 149 43 0 chr5 20658486 20658533 -178971617 + (TA)n Simple_repeat Simple_repeat 1 49 0 1876 128 4 0 chr5 20658587 20658853 -178971297 + AluSg SINE Alu 37 303 -7 49 43 0 0 chr5 20660016 20660086 -178970064 + AT_rich Low_complexity Low_complexity 1 70 0 850 118 15 0 chr5 20661342 20661478 -178968672 - L1PA14 LINE L1 -3 6158 6021 11371 192 39 7 chr5 20661479 20665302 -178964848 - L1PA12 LINE L1 -1938 5646 1697 287 299 68 20 chr5 20665583 20665730 -178964420 + L1MEc LINE L1 1628 1781 -4615 264 305 66 12 chr5 20665806 20665973 -178964177 + L1MEc LINE L1 1907 2082 -4314 1644 191 3 0 chr5 20666061 20666343 -178963807 - AluJo SINE Alu -23 289 7 22 0 0 0 chr5 20666362 20666384 -178963766 + AT_rich Low_complexity Low_complexity 1 22 0 321 269 122 21 chr5 20666675 20666875 -178963275 + L1MEc LINE L1 2474 2711 -3504 3099 135 22 8 chr5 20666875 20667365 -178962785 - LOR1a LTR ERV1 0 497 1 321 269 122 21 chr5 20667365 20667443 -178962707 + L1MEc LINE L1 2711 2780 -3435 2101 97 7 30 chr5 20667511 20667810 -178962340 - AluSg SINE Alu -18 292 1 21 36 0 0 chr5 20668521 20668549 -178961601 + AT_rich Low_complexity Low_complexity 1 28 0 396 184 10 19 chr5 20668612 20668715 -178961435 + L1MA4 LINE L1 6197 6298 -2 24 32 0 0 chr5 20668899 20668930 -178961220 + AT_rich Low_complexity Low_complexity 1 31 0 1582 203 101 0 chr5 20669898 20670214 -178959936 - MER7A DNA MER2_type 0 346 1 21 0 0 0 chr5 20670557 20670578 -178959572 + AT_rich Low_complexity Low_complexity 1 21 0 1444 188 3 39 chr5 20670588 20670896 -178959254 + AluJb SINE Alu 3 299 -13 200 143 29 0 chr5 20671466 20671501 -178958649 + (TA)n Simple_repeat Simple_repeat 1 36 0 10079 196 74 24 chr5 20671555 20672462 -178957688 + L1MCa LINE L1 16 877 -5730 419 122 61 0 chr5 20672462 20672544 -178957606 - L1PA13 LINE L1 -1 6162 6076 10079 196 74 24 chr5 20672544 20674152 -178955998 + L1MCa LINE L1 877 2693 -3914 242 129 24 5 chr5 20674252 20674304 -178955846 - THE1A LTR MaLR -259 96 45 1155 250 11 39 chr5 20674345 20674705 -178955445 + L1M4 LINE L1 4516 4865 -1281 245 203 51 0 chr5 20674716 20674775 -178955375 - MSTB1 LTR MaLR -13 419 358 1916 154 36 36 chr5 20674775 20675139 -178955011 - THE1B LTR MaLR 0 364 1 340 333 0 9 chr5 20675251 20675365 -178954785 - L1ME LINE L1 -5059 1325 1213 386 288 79 43 chr5 20675374 20675908 -178954242 - L1ME LINE L1 -5075 1297 745 230 166 95 136 chr5 20676110 20676279 -178953871 - L1ME LINE L1 -5859 513 352 2166 93 10 0 chr5 20676326 20676617 -178953533 + AluSq SINE Alu 1 294 -19 1009 181 12 81 chr5 20677127 20677386 -178952764 - MER65C LTR ERV1 0 461 221 270 191 91 55 chr5 20677478 20677588 -178952562 - MER51D LTR ERV1 -43 614 501 2009 116 4 0 chr5 20677781 20678080 -178952070 - AluSc SINE Alu 0 302 3 1085 215 14 5 chr5 20678368 20678591 -178951559 - MER65C LTR ERV1 -236 225 1 207 214 0 0 chr5 20679975 20680017 -178950133 + A-rich Low_complexity Low_complexity 2 43 0 24 32 0 0 chr5 20681988 20682019 -178948131 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr5 20682124 20682159 -178947991 + AT_rich Low_complexity Low_complexity 1 35 0 792 277 81 39 chr5 20683556 20683730 -178946420 - MLT1D LTR MaLR -2 503 338 2167 80 6 68 chr5 20683730 20684055 -178946095 + AluSq SINE Alu 1 305 -8 792 277 81 39 chr5 20684055 20684363 -178945787 - MLT1D LTR MaLR -167 338 1 1300 232 33 129 chr5 20684386 20684907 -178945243 - MLT1D-int LTR MaLR -24 1347 877 2053 244 28 62 chr5 20684986 20685774 -178944376 - MLT1D-int LTR MaLR -488 883 5 793 261 82 76 chr5 20685778 20686119 -178944031 - MLT1D LTR MaLR 0 505 125 215 355 55 18 chr5 20687142 20687252 -178942898 + MIR SINE MIR 1 114 -148 357 336 28 49 chr5 20687387 20687711 -178942439 + MLT1I LTR MaLR 76 392 -17 260 229 124 9 chr5 20687720 20687825 -178942325 + MIR SINE MIR 146 262 0 1783 107 8 4 chr5 20687911 20688163 -178941987 + AluSc SINE Alu 1 253 -56 29 28 0 0 chr5 20690018 20690054 -178940096 + AT_rich Low_complexity Low_complexity 1 36 0 302 323 99 25 chr5 20690273 20690474 -178939676 - L1MC/D LINE L1 -2004 5804 5589 1947 136 45 0 chr5 20690828 20691115 -178939035 - AluSx SINE Alu -10 302 3 296 238 25 84 chr5 20691292 20691436 -178938714 + LTR41 LTR ERVL 73 226 -569 320 244 10 8 chr5 20693389 20693487 -178936663 + MLT1I LTR MaLR 71 143 -266 226 339 99 33 chr5 20693679 20693800 -178936350 + LTR67 LTR ERVL 131 259 -298 2844 205 37 18 chr5 20693988 20694613 -178935537 - LTR9B LTR ERV1 -1 643 7 246 288 81 36 chr5 20695583 20695694 -178934456 + L1ME LINE L1 121 236 -5834 431 327 23 8 chr5 20695949 20696212 -178933938 + L1M4 LINE L1 3211 3477 -2669 211 247 14 27 chr5 20696242 20696315 -178933835 + (TATATG)n Simple_repeat Simple_repeat 2 73 0 1455 280 71 67 chr5 20696388 20697614 -178932536 + L1M4 LINE L1 3787 5043 -1103 514 162 15 167 chr5 20697735 20697933 -178932217 + L1MA8 LINE L1 5876 6043 -257 3076 171 139 5 chr5 20698447 20699073 -178931077 - Tigger1 DNA MER2_type -1 2417 1708 264 236 42 7 chr5 20699093 20699237 -178930913 + (TA)n Simple_repeat Simple_repeat 1 149 0 288 77 0 0 chr5 20699268 20699307 -178930843 + (TA)n Simple_repeat Simple_repeat 2 40 0 2388 98 37 13 chr5 20699307 20699684 -178930466 - MLT2A1 LTR ERVL -58 386 1 7905 217 40 24 chr5 20699684 20699848 -178930302 - Tigger1 DNA MER2_type -707 1711 1551 2415 114 22 3 chr5 20699848 20700216 -178929934 - THE1C LTR MaLR 0 375 1 7905 217 40 24 chr5 20700216 20701720 -178928430 - Tigger1 DNA MER2_type -867 1551 17 191 257 14 0 chr5 20702204 20702278 -178927872 + (TATG)n Simple_repeat Simple_repeat 2 76 0 798 158 0 0 chr5 20702334 20702467 -178927683 - FLAM_C SINE Alu 0 133 1 305 210 119 74 chr5 20702567 20702743 -178927407 + MER112 DNA MER1_type 65 248 -12 359 331 44 11 chr5 20703100 20703281 -178926869 - MIR SINE MIR -70 192 6 1199 198 0 117 chr5 20703327 20703523 -178926627 - AluJo SINE Alu -12 300 157 1587 72 5 0 chr5 20703523 20703718 -178926432 - AluSp SINE Alu -117 196 1 1199 198 0 117 chr5 20703718 20703854 -178926296 - AluJo SINE Alu -155 157 7 228 298 0 36 chr5 20704178 20704262 -178925888 + L3 LINE CR1 1381 1461 -116 315 179 18 0 chr5 20704314 20704370 -178925780 + L2 LINE L2 3257 3313 0 186 321 137 61 chr5 20704403 20704665 -178925485 - L3b LINE CR1 -13 1570 1289 897 228 38 0 chr5 20704739 20704923 -178925227 + MER58A DNA MER1_type 3 193 -31 22 0 0 0 chr5 20704924 20704946 -178925204 + AT_rich Low_complexity Low_complexity 1 22 0 7134 87 31 5 chr5 20704946 20706780 -178923370 - L1PA8 LINE L1 -13 6159 4297 10040 119 10 0 chr5 20706780 20708337 -178921813 + L1PA8 LINE L1 2711 4283 -1863 11568 218 27 41 chr5 20708387 20713270 -178916880 + L1PA16 LINE L1 1 4648 -2221 1918 169 36 14 chr5 20713270 20713626 -178916524 + THE1B LTR MaLR 1 364 0 11568 218 27 41 chr5 20713626 20715818 -178914332 + L1PA16 LINE L1 4648 6869 0 447 247 79 44 chr5 20716389 20716738 -178913412 - LTR15 LTR ERV1 0 595 141 24 77 0 0 chr5 20716827 20716879 -178913271 + AT_rich Low_complexity Low_complexity 1 52 0 488 147 0 0 chr5 20717510 20717585 -178912565 + L1PA16 LINE L1 6044 6118 -48 420 268 91 16 chr5 20717708 20717951 -178912199 + L1ME2 LINE L1 4476 4736 -1410 2391 73 0 3 chr5 20717951 20718252 -178911898 - AluY SINE Alu -7 304 5 341 174 81 12 chr5 20718276 20718437 -178911713 + (TA)n Simple_repeat Simple_repeat 1 172 0 316 153 58 36 chr5 20718458 20718595 -178911555 + (TA)n Simple_repeat Simple_repeat 1 140 0 308 261 27 69 chr5 20718605 20718865 -178911285 + L1ME2 LINE L1 4812 5060 -1086 200 200 25 0 chr5 20718959 20718999 -178911151 + (TG)n Simple_repeat Simple_repeat 2 42 0 1368 252 58 78 chr5 20719148 20719818 -178910332 + L1ME2 LINE L1 5360 6016 -148 2303 62 7 7 chr5 20720420 20720729 -178909421 - AluY SINE Alu -2 309 1 330 349 17 8 chr5 20722855 20723047 -178907103 + L1MC/D LINE L1 5462 5659 -510 552 324 74 71 chr5 20723440 20724049 -178906101 + L1ME3 LINE L1 5302 5915 -247 839 309 75 24 chr5 20724246 20724579 -178905571 - MLT1I LTR MaLR 0 409 60 35 63 0 0 chr5 20725189 20725252 -178904898 + AT_rich Low_complexity Low_complexity 1 63 0 206 190 25 38 chr5 20725292 20725371 -178904779 + T-rich Low_complexity Low_complexity 5 82 0 348 222 0 68 chr5 20726706 20726823 -178903327 - MER34C LTR ERV1 -3 582 474 292 177 104 73 chr5 20727110 20727206 -178902944 - MER34B LTR ERV1 -444 121 23 29 28 0 0 chr5 20727645 20727681 -178902469 + AT_rich Low_complexity Low_complexity 1 36 0 202 24 24 73 chr5 20727753 20727794 -178902356 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 186 103 0 0 chr5 20728240 20728269 -178901881 + (CAT)n Simple_repeat Simple_repeat 2 30 0 26 0 0 0 chr5 20730234 20730260 -178899890 + AT_rich Low_complexity Low_complexity 1 26 0 261 211 0 0 chr5 20730358 20730415 -178899735 + (CA)n Simple_repeat Simple_repeat 2 58 0 271 331 32 16 chr5 20731405 20731529 -178898621 + LTR33A LTR ERVL 61 186 -337 413 297 273 8 chr5 20731718 20732099 -178898051 + L2 LINE L2 1752 2233 -1081 324 267 85 120 chr5 20732108 20732684 -178897466 - MLT1F1 LTR MaLR -25 542 3 1066 323 141 22 chr5 20732707 20733509 -178896641 + L2 LINE L2 2258 3183 -130 2887 193 29 8 chr5 20733509 20734099 -178896051 + MER6A DNA MER2_type 4 605 0 1066 323 141 22 chr5 20734099 20734248 -178895902 + L2 LINE L2 3183 3313 0 311 260 30 0 chr5 20734296 20734396 -178895754 + (TG)n Simple_repeat Simple_repeat 2 104 0 2082 190 0 35 chr5 20734635 20734777 -178895373 - MER66B LTR ERV1 -88 398 253 2120 96 10 0 chr5 20734777 20735068 -178895082 - AluSx SINE Alu -18 294 1 2082 190 0 35 chr5 20735068 20735331 -178894819 - MER66B LTR ERV1 -233 253 7 362 390 139 12 chr5 20736005 20736580 -178893570 - L2 LINE L2 -857 2457 1810 1436 209 7 40 chr5 20736816 20737118 -178893032 - AluJb SINE Alu -10 292 1 23 0 0 0 chr5 20737251 20737274 -178892876 + AT_rich Low_complexity Low_complexity 1 23 0 874 191 46 8 chr5 20738021 20738240 -178891910 + MER61D LTR ERV1 340 501 0 23 33 0 0 chr5 20738623 20738653 -178891497 + AT_rich Low_complexity Low_complexity 1 30 0 1418 176 108 3 chr5 20738775 20739099 -178891051 - L1MC1 LINE L1 -197 6136 5779 23 68 0 0 chr5 20739136 20739180 -178890970 + AT_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr5 20739440 20739469 -178890681 + AT_rich Low_complexity Low_complexity 1 29 0 236 30 30 0 chr5 20739981 20740014 -178890136 + (TA)n Simple_repeat Simple_repeat 2 35 0 696 355 83 23 chr5 20740606 20740870 -178889280 + L1M3c LINE L1 1364 1611 -5885 2209 137 28 19 chr5 20740870 20741229 -178888921 + THE1B LTR MaLR 3 364 0 696 355 83 23 chr5 20741229 20741443 -178888707 + L1M3c LINE L1 1611 1871 -5625 2501 271 78 26 chr5 20741547 20742714 -178887436 + L1M3c LINE L1 2017 3100 -4465 2409 65 3 0 chr5 20742714 20743008 -178887142 + AluY SINE Alu 1 295 -16 2501 271 78 26 chr5 20743008 20743351 -178886799 + L1M3c LINE L1 3100 3424 -4141 29 0 0 0 chr5 20743625 20743654 -178886496 + AT_rich Low_complexity Low_complexity 1 29 0 2375 69 0 10 chr5 20744775 20745080 -178885070 + AluY SINE Alu 1 302 -9 200 229 0 21 chr5 20746311 20746359 -178883791 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 436 315 14 7 chr5 20747908 20748054 -178882096 + MIR SINE MIR 48 194 -68 1688 232 25 0 chr5 20748427 20748781 -178881369 + MLT1A1 LTR MaLR 1 363 -2 324 345 80 20 chr5 20748808 20749008 -178881142 + L1MEd LINE L1 71 282 -5837 23 0 0 0 chr5 20749303 20749326 -178880824 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 20749485 20749514 -178880636 + AT_rich Low_complexity Low_complexity 1 29 0 806 251 83 74 chr5 20749666 20750100 -178880050 + L1MCa LINE L1 43 406 -5639 * 2061 249 56 50 chr5 20750097 20751228 -178878922 + L1M3c LINE L1 4174 5311 -2254 2031 189 31 14 chr5 20751229 20751647 -178878503 - LOR1b LTR ERV1 0 461 37 2476 176 7 0 chr5 20751834 20752237 -178877913 - L1PA12 LINE L1 -5867 1714 1309 1573 157 61 66 chr5 20752237 20752614 -178877536 + THE1C LTR MaLR 1 375 0 7396 206 75 5 chr5 20752616 20754152 -178875998 + THE1C-int LTR MaLR 3 1646 -5 1727 168 75 9 chr5 20754159 20754504 -178875646 + THE1C LTR MaLR 5 372 -3 3041 209 4 0 chr5 20754507 20755013 -178875137 - L1PA12 LINE L1 -6274 1307 800 30 77 0 0 chr5 20755288 20755353 -178874797 + AT_rich Low_complexity Low_complexity 1 65 0 213 39 0 0 chr5 20755377 20755403 -178874747 + (TG)n Simple_repeat Simple_repeat 1 26 0 232 91 0 0 chr5 20756022 20756055 -178874095 - L1MEc LINE L1 -916 5299 5267 2350 200 4 0 chr5 20756061 20756531 -178873619 + L1P LINE L1 4035 4506 -1640 887 278 89 25 chr5 20756535 20757143 -178873007 - L1MEc LINE L1 -967 5248 4602 1231 241 20 7 chr5 20757220 20757519 -178872631 - MER58B DNA MER1_type -2 339 37 504 271 65 48 chr5 20757527 20757819 -178872331 - L1MEc LINE L1 -1827 4388 4092 1377 250 76 45 chr5 20757831 20758636 -178871514 - L1MEc LINE L1 -3185 3030 2201 3687 134 35 58 chr5 20758637 20759362 -178870788 - LTR1 LTR ERV1 0 785 78 1675 92 35 0 chr5 20759363 20759590 -178870560 - LTR12 LTR ERV1 0 714 480 277 319 9 0 chr5 20759591 20759707 -178870443 - LTR30 LTR ERV1 -80 642 526 1159 64 0 0 chr5 20759707 20759848 -178870302 - LTR12 LTR ERV1 -455 259 119 257 250 0 0 chr5 20759848 20759900 -178870250 - LTR30 LTR ERV1 -670 52 1 * 303 231 46 0 chr5 20759900 20759949 -178870201 - LTR1 LTR ERV1 -702 83 32 1806 168 3 7 chr5 20760158 20760462 -178869688 - AluSg SINE Alu -6 304 2 529 279 48 86 chr5 20760466 20760908 -178869242 - L1MEc LINE L1 -4320 2076 1670 7484 28 3 1 chr5 20760908 20761984 -178868166 + L1PA4 LINE L1 5078 6155 0 529 279 48 86 chr5 20761984 20762251 -178867899 - L1MEc LINE L1 -4726 1670 1394 26 0 0 0 chr5 20762836 20762862 -178867288 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 20762898 20762920 -178867230 + AT_rich Low_complexity Low_complexity 1 22 0 888 299 25 25 chr5 20763935 20764256 -178865894 - LTR16A LTR ERVL -102 348 28 2173 106 3 3 chr5 20764563 20764855 -178865295 + AluSx SINE Alu 3 294 -18 241 250 37 56 chr5 20765433 20765533 -178864617 - MLT1H1 LTR MaLR -2 553 456 1466 237 85 38 chr5 20765533 20765955 -178864195 + MLT2B1 LTR ERVL 1 442 -78 198 143 0 0 chr5 20765958 20765993 -178864157 + (T)n Simple_repeat Simple_repeat 1 35 0 1804 203 39 6 chr5 20766094 20766458 -178863692 + MSTA LTR MaLR 53 428 0 350 322 61 23 chr5 20766606 20766967 -178863183 + L1ME3 LINE L1 5767 6141 -23 547 241 6 13 chr5 20767376 20767534 -178862616 - LTR38B LTR ERV1 -18 592 436 794 219 12 0 chr5 20767540 20767704 -178862446 + FRAM SINE Alu 1 166 -10 400 274 100 47 chr5 20767722 20768069 -178862081 - LTR38B LTR ERV1 -191 381 1 1851 117 51 11 chr5 20768791 20769064 -178861086 - AluSx SINE Alu -28 284 1 1991 234 37 14 chr5 20769504 20769935 -178860215 + MER21B LTR ERV1 94 534 -329 387 259 105 6 chr5 20769935 20770097 -178860053 + L1M4 LINE L1 5654 5831 -331 2135 263 40 34 chr5 20770160 20770269 -178859881 - MER44D DNA MER2_type -1882 605 498 3594 172 59 17 chr5 20770269 20770605 -178859545 + MER72 LTR ERV1 1 321 -401 2293 103 0 0 chr5 20770605 20770906 -178859244 - AluSc SINE Alu -8 301 1 3594 172 59 17 chr5 20770906 20771262 -178858888 + MER72 LTR ERV1 321 722 0 2135 263 40 34 chr5 20771262 20771881 -178858269 - MER44D DNA MER2_type -1989 498 1 539 308 33 17 chr5 20771881 20772121 -178858029 + L1ME1 LINE L1 5919 6162 -4 885 217 21 5 chr5 20772707 20772896 -178857254 - MLT1B LTR MaLR -8 382 191 289 89 0 36 chr5 20772967 20773023 -178857127 + (TTC)n Simple_repeat Simple_repeat 1 54 0 2398 67 0 3 chr5 20773038 20773338 -178856812 + AluY SINE Alu 1 299 -12 1228 223 22 4 chr5 20773338 20773607 -178856543 - AluJo SINE Alu -36 276 3 567 276 0 7 chr5 20773651 20773803 -178856347 - MLT1B LTR MaLR -238 152 2 27 49 0 0 chr5 20774783 20774824 -178855326 + AT_rich Low_complexity Low_complexity 1 41 0 234 231 0 0 chr5 20775545 20775597 -178854553 - L1MEc LINE L1 -6177 219 168 446 258 163 64 chr5 20775669 20775710 -178854440 - L1M4 LINE L1 -1032 5114 5078 2081 135 7 0 chr5 20775710 20776013 -178854137 + AluSx SINE Alu 5 309 -3 446 258 163 64 chr5 20776013 20776064 -178854086 - L1M4 LINE L1 -1068 5078 5033 1939 144 10 0 chr5 20776064 20776362 -178853788 - AluSx SINE Alu -9 303 3 446 258 163 64 chr5 20776362 20776827 -178853323 - L1M4 LINE L1 -1113 5033 4501 24 53 0 0 chr5 20777060 20777098 -178853052 + AT_rich Low_complexity Low_complexity 1 38 0 364 313 126 27 chr5 20778030 20778404 -178851746 + L1M4 LINE L1 4433 4843 -1303 29 70 0 0 chr5 20778439 20778496 -178851654 + AT_rich Low_complexity Low_complexity 1 57 0 238 279 39 29 chr5 20778550 20778654 -178851496 - MER21B LTR ERV1 -272 591 487 789 280 55 8 chr5 20779555 20779937 -178850213 + L1MC1 LINE L1 2650 3049 -3097 540 276 22 0 chr5 20780473 20780658 -178849492 + L1MC1 LINE L1 3230 3418 -2728 5051 269 37 11 chr5 20780675 20782359 -178847791 + L1MC1 LINE L1 3508 5236 -910 359 228 40 0 chr5 20782361 20782462 -178847688 + L1MA9 LINE L1 6181 6285 -27 21 0 0 0 chr5 20782486 20782507 -178847643 + AT_rich Low_complexity Low_complexity 1 21 0 748 121 0 92 chr5 20782564 20782705 -178847445 + LTR12 LTR ERV1 42 169 -545 4650 142 70 0 chr5 20782792 20783615 -178846535 + L1MC1 LINE L1 5313 6193 -140 1742 71 3 160 chr5 20783635 20783973 -178846177 + LTR12 LTR ERV1 1 285 -429 302 256 11 0 chr5 20783974 20784064 -178846086 + LTR30 LTR ERV1 553 643 -79 662 82 0 0 chr5 20784065 20784150 -178846000 + LTR12 LTR ERV1 481 565 -149 422 209 90 52 chr5 20784150 20784284 -178845866 + L1MC1 LINE L1 6195 6333 0 200 365 35 30 chr5 20784413 20784610 -178845540 + L2 LINE L2 1854 2051 -1263 1876 199 48 70 chr5 20784972 20785530 -178844620 + MLT2B3 LTR ERVL 1 546 -8 30 45 0 0 chr5 20786673 20786717 -178843433 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 20786882 20786908 -178843242 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chr5 20786945 20786980 -178843170 + AT_rich Low_complexity Low_complexity 1 35 0 3251 169 26 20 chr5 20787111 20787714 -178842436 + MER4D LTR ERV1 1 607 -296 1914 39 0 22 chr5 20787714 20787945 -178842205 - AluY SINE Alu -2 309 84 1177 68 0 56 chr5 20787945 20788107 -178842043 - AluY SINE Alu -158 153 1 1055 165 181 34 chr5 20788118 20788355 -178841795 + MER4D LTR ERV1 603 874 -29 40 59 0 0 chr5 20788358 20788426 -178841724 + AT_rich Low_complexity Low_complexity 1 68 0 21 0 0 0 chr5 20788731 20788752 -178841398 + AT_rich Low_complexity Low_complexity 1 21 0 2792 165 162 18 chr5 20788816 20789427 -178840723 - LTR34 LTR ERV1 0 699 1 2094 152 16 31 chr5 20789430 20789811 -178840339 - THE1C LTR MaLR 0 375 1 2074 120 7 13 chr5 20789857 20790166 -178839984 - AluSx SINE Alu -5 307 1 2442 70 0 3 chr5 20790524 20790823 -178839327 + AluY SINE Alu 1 298 -13 401 270 45 25 chr5 20790947 20791147 -178839003 + L1MC/D LINE L1 5318 5521 -2287 482 348 44 45 chr5 20792087 20792661 -178837489 - HERVL LTR ERVL -381 5273 4701 255 319 35 18 chr5 20792775 20792888 -178837262 - HERVL LTR ERVL -1180 4584 4470 227 158 18 18 chr5 20794283 20794317 -178835833 + (TA)n Simple_repeat Simple_repeat 2 38 -20 1359 134 51 90 chr5 20794317 20794706 -178835444 + THE1C LTR MaLR 2 375 0 227 158 18 18 chr5 20794706 20794728 -178835422 + (TA)n Simple_repeat Simple_repeat 37 58 0 21 0 0 0 chr5 20795763 20795784 -178834366 + AT_rich Low_complexity Low_complexity 1 21 0 468 123 0 0 chr5 20796018 20796091 -178834059 + (TCCC)n Simple_repeat Simple_repeat 2 74 0 1356 223 24 7 chr5 20796091 20796378 -178833772 - AluJo SINE Alu -10 292 1 257 352 46 50 chr5 20796951 20797232 -178832918 + L2 LINE L2 2113 2392 -922 303 206 0 0 chr5 20797756 20797819 -178832331 - L1MC4 LINE L1 -1339 6703 6641 956 273 68 65 chr5 20798624 20798961 -178831189 + MLT1E LTR MaLR 48 388 -205 2237 113 3 0 chr5 20798961 20799261 -178830889 + AluSp SINE Alu 1 301 -12 956 273 68 65 chr5 20799261 20799307 -178830843 + MLT1E LTR MaLR 388 432 -161 417 94 0 0 chr5 20799307 20799371 -178830779 - L1P LINE L1 -3053 3093 3030 426 285 40 13 chr5 20799371 20799522 -178830628 + MLT1E LTR MaLR 430 584 -9 232 139 23 0 chr5 20799566 20799609 -178830541 - MER116 DNA Mariner 0 80 37 2523 51 0 10 chr5 20799783 20800094 -178830056 + AluY SINE Alu 2 309 -2 28 86 0 0 chr5 20800435 20800505 -178829645 + AT_rich Low_complexity Low_complexity 1 70 0 21 0 0 0 chr5 20801467 20801488 -178828662 + AT_rich Low_complexity Low_complexity 1 21 0 317 125 18 0 chr5 20801537 20801593 -178828557 + GA-rich Low_complexity Low_complexity 3 59 0 21 36 0 0 chr5 20801803 20801831 -178828319 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 20801970 20802001 -178828149 + AT_rich Low_complexity Low_complexity 1 31 0 358 139 0 25 chr5 20802263 20802342 -178827808 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 227 191 15 0 chr5 20802729 20802797 -178827353 + (TA)n Simple_repeat Simple_repeat 1 69 0 238 146 18 18 chr5 20802797 20802852 -178827298 + GA-rich Low_complexity Low_complexity 1 55 0 231 178 0 22 chr5 20802930 20802975 -178827175 + LTR16B LTR ERVL 2 45 -419 2289 198 68 28 chr5 20803287 20803754 -178826396 + MLT2B1 LTR ERVL 1 448 -72 327 49 0 0 chr5 20803754 20803795 -178826355 + (TC)n Simple_repeat Simple_repeat 2 42 0 243 0 0 0 chr5 20803794 20803821 -178826329 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 2289 198 68 28 chr5 20803795 20803853 -178826297 + MLT2B1 LTR ERVL 448 520 0 573 341 97 40 chr5 20804653 20805202 -178824948 + HERV16 LTR ERVL 993 1572 -3424 1118 323 57 19 chr5 20805271 20806019 -178824131 + HERV16 LTR ERVL 1758 2515 -2481 10516 109 54 14 chr5 20806101 20807872 -178822278 - MER4-int LTR ERV1 -246 6352 4511 42952 33 21 1 chr5 20807874 20813905 -178816245 + L1PA2 LINE L1 2 6155 0 189 0 0 0 chr5 20813909 20813930 -178816220 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 3529 102 70 20 chr5 20813930 20814516 -178815634 - MER4-int LTR ERV1 -2072 4526 3912 2495 102 65 65 chr5 20814550 20815090 -178815060 - MER4-int LTR ERV1 -3321 3277 2738 1149 209 16 19 chr5 20815091 20815349 -178814801 + LTR8 LTR ERV1 1 257 -434 4036 81 62 21 chr5 20815349 20816014 -178814136 - MER4A-int LTR ERV1 -4103 2495 1804 1304 99 74 79 chr5 20816012 20816102 -178814048 - MER4A-int LTR ERV1 -4210 1268 1179 * 2584 64 0 0 chr5 20816102 20816413 -178813737 + AluY SINE Alu 1 311 0 1304 99 74 79 chr5 20816413 20816711 -178813439 - MER4A-int LTR ERV1 -4299 1179 510 2459 108 136 89 chr5 20816718 20816969 -178813181 - MER4A-int LTR ERV1 -6019 579 341 2111 52 88 0 chr5 20816969 20817241 -178812909 + AluY SINE Alu 1 296 -15 2459 108 136 89 chr5 20817241 20817542 -178812608 - MER4A-int LTR ERV1 -6257 341 1 1434 156 78 47 chr5 20817546 20817879 -178812271 - MER4A LTR ERV1 -1 663 262 255 111 22 22 chr5 20817879 20817924 -178812226 - MER4A LTR ERV1 -566 98 54 850 297 90 29 chr5 20818245 20818397 -178811753 + LTR16B LTR ERVL 1 142 -322 1242 218 84 30 chr5 20818397 20818824 -178811326 - LTR7 LTR ERV1 0 450 1 850 297 90 29 chr5 20818824 20819092 -178811058 + LTR16B LTR ERVL 142 447 -17 746 196 7 0 chr5 20819194 20819337 -178810813 - L1PB4 LINE L1 -7 6149 6006 1644 226 64 10 chr5 20820144 20820552 -178809598 - MER87 LTR ERV1 -2 539 110 397 226 130 35 chr5 20820570 20820685 -178809465 - MER87 LTR ERV1 -397 144 19 227 365 83 39 chr5 20820707 20820888 -178809262 - L2 LINE L2 -38 3234 3046 379 304 136 29 chr5 20821816 20822089 -178808061 + MLT1J2 LTR MaLR 25 312 -134 3110 186 36 3 chr5 20822112 20822698 -178807452 - LTR62 LTR ERVK -2 717 113 491 290 51 42 chr5 20824101 20824315 -178805835 + MER20 DNA MER1_type 3 218 -1 192 77 0 0 chr5 20824973 20824999 -178805151 + (T)n Simple_repeat Simple_repeat 1 26 0 2357 98 0 0 chr5 20825002 20825309 -178804841 - AluY SINE Alu -4 307 1 668 37 0 0 chr5 20825479 20825561 -178804589 + HERVL-A2 LTR ERVL 5573 5654 0 2931 109 24 31 chr5 20825561 20826012 -178804138 + MLT2A2 LTR ERVL 1 448 -5 469 310 46 6 chr5 20826200 20826374 -178803776 + MLT1L LTR MaLR 371 551 -64 181 352 38 0 chr5 20826427 20826532 -178803618 + MIR SINE MIR 154 262 0 221 204 19 0 chr5 20826546 20826600 -178803550 + (TTA)n Simple_repeat Simple_repeat 3 57 0 25 0 0 0 chr5 20826724 20826749 -178803401 + AT_rich Low_complexity Low_complexity 1 25 0 3139 207 75 20 chr5 20828240 20828714 -178801436 - L1MB3 LINE L1 0 6183 5736 1923 190 130 21 chr5 20828714 20829246 -178800904 + LTR49 LTR ERV1 2 591 -4 3139 207 75 20 chr5 20829246 20830013 -178800137 - L1MB3 LINE L1 -447 5736 4870 4822 140 41 32 chr5 20830013 20830284 -178799866 - MER4D LTR ERV1 0 903 636 1891 120 4 7 chr5 20830284 20830560 -178799590 - AluSx SINE Alu 0 312 38 4822 140 41 32 chr5 20830560 20831183 -178798967 - MER4D LTR ERV1 -267 636 1 3139 207 75 20 chr5 20831183 20831200 -178798950 - L1MB3 LINE L1 -1313 4870 4855 185 182 18 0 chr5 20831687 20831742 -178798408 + (TA)n Simple_repeat Simple_repeat 1 56 0 24 0 0 0 chr5 20831843 20831867 -178798283 + AT_rich Low_complexity Low_complexity 1 24 0 2200 123 51 14 chr5 20832788 20833139 -178797011 + THE1B LTR MaLR 1 364 0 11304 102 6 3 chr5 20833139 20834695 -178795455 + THE1B-int LTR MaLR 1 1562 -18 2105 85 85 29 chr5 20834702 20835042 -178795108 + THE1B LTR MaLR 1 359 -5 510 147 42 14 chr5 20835208 20835351 -178794799 + GA-rich Low_complexity Low_complexity 1 147 0 2032 214 57 42 chr5 20836725 20837273 -178792877 + MER34B LTR ERV1 10 565 0 24 0 0 0 chr5 20837634 20837658 -178792492 + AT_rich Low_complexity Low_complexity 1 24 0 2474 60 0 10 chr5 20838281 20838580 -178791570 - AluY SINE Alu -11 300 5 1882 154 30 3 chr5 20840835 20841134 -178789016 + AluSx SINE Alu 1 307 -5 1690 141 96 37 chr5 20841222 20841576 -178788574 + THE1C LTR MaLR 1 375 0 230 224 0 17 chr5 20841595 20841653 -178788497 + L1MCa LINE L1 2006 2062 -4364 * 250 234 0 64 chr5 20841637 20841731 -178788419 - L1MC4 LINE L1 -1340 6702 6615 238 203 0 17 chr5 20841681 20841740 -178788410 + L1MCa LINE L1 2006 2063 -4363 * 183 205 0 0 chr5 20841741 20841780 -178788370 + (TA)n Simple_repeat Simple_repeat 2 40 0 227 174 0 0 chr5 20841780 20841826 -178788324 - LTR66 LTR ERVL -171 439 394 488 106 55 12 chr5 20841832 20842071 -178788079 + (TA)n Simple_repeat Simple_repeat 1 249 0 250 84 74 21 chr5 20842115 20842210 -178787940 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 34 0 0 0 chr5 20842311 20842345 -178787805 + AT_rich Low_complexity Low_complexity 1 34 0 645 93 22 44 chr5 20842345 20842528 -178787622 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 270 123 31 31 chr5 20842533 20842598 -178787552 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 560 152 51 0 chr5 20842599 20842903 -178787247 + (TA)n Simple_repeat Simple_repeat 1 319 0 228 214 0 0 chr5 20843043 20843085 -178787065 + (TG)n Simple_repeat Simple_repeat 1 42 0 326 206 9 103 chr5 20843088 20843195 -178786955 - MLT1E LTR MaLR -7 586 490 1563 143 129 57 chr5 20843919 20844269 -178785881 + THE1C LTR MaLR 1 375 0 192 77 0 0 chr5 20844425 20844451 -178785699 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 244 208 38 0 chr5 20844580 20844633 -178785517 + CT-rich Low_complexity Low_complexity 2 56 0 641 387 88 27 chr5 20844641 20845269 -178784881 - HAL1 LINE L1 -1830 677 12 241 333 0 0 chr5 20845586 20845652 -178784498 - MIR SINE MIR -149 113 48 3417 137 29 19 chr5 20845661 20846331 -178783819 + MER50 LTR ERV1 3 711 -23 9817 160 31 11 chr5 20846778 20849741 -178780409 - L1MA1 LINE L1 0 6302 3272 1070 158 37 84 chr5 20850160 20850457 -178779693 + L1MA7 LINE L1 6007 6289 -2 22 0 0 0 chr5 20850457 20850479 -178779671 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr5 20851193 20851224 -178778926 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 20852104 20852133 -178778017 + AT_rich Low_complexity Low_complexity 1 29 0 1771 118 0 12 chr5 20852304 20852558 -178777592 - AluSx SINE Alu -25 287 37 456 35 0 0 chr5 20853758 20853816 -178776334 + (CA)n Simple_repeat Simple_repeat 2 59 0 347 279 78 0 chr5 20854117 20854246 -178775904 - MIR SINE MIR -3 259 121 674 302 62 19 chr5 20854504 20854607 -178775543 + MER45C DNA AcHobo 1 98 -855 2067 128 3 3 chr5 20854607 20854905 -178775245 - AluSc SINE Alu -11 298 1 674 302 62 19 chr5 20854905 20855059 -178775091 + MER45C DNA AcHobo 98 269 -684 486 328 0 0 chr5 20855109 20855231 -178774919 + MER45C DNA AcHobo 414 535 -418 4694 190 77 30 chr5 20855956 20856206 -178773944 + L1MA8 LINE L1 3989 4226 -2065 2579 65 0 0 chr5 20856206 20856516 -178773634 + AluY SINE Alu 1 310 -1 4694 190 77 30 chr5 20856516 20857091 -178773059 + L1MA8 LINE L1 4226 4772 -1519 655 134 53 53 chr5 20857091 20857278 -178772872 + L1MA7 LINE L1 6104 6290 -1 4694 190 77 30 chr5 20857278 20857924 -178772226 + L1MA8 LINE L1 4772 5386 -905 2547 40 0 7 chr5 20857924 20858226 -178771924 - AluY SINE Alu -11 300 1 4694 190 77 30 chr5 20858226 20858947 -178771203 + L1MA8 LINE L1 5386 6289 -2 186 103 0 0 chr5 20859039 20859068 -178771082 + (CA)n Simple_repeat Simple_repeat 2 30 0 402 285 146 106 chr5 20859074 20859993 -178770157 - L2 LINE L2 -901 2413 1458 1833 129 27 20 chr5 20860519 20860813 -178769337 - AluSq SINE Alu -9 304 9 524 345 35 16 chr5 20860888 20861204 -178768946 + LTR16C LTR ERVL 170 491 0 239 340 159 39 chr5 20861205 20861502 -178768648 - L2 LINE L2 -2323 991 731 2095 120 0 7 chr5 20861502 20861813 -178768337 + AluSx SINE Alu 2 310 0 239 340 159 39 chr5 20861813 20862055 -178768095 - L2 LINE L2 -2583 731 386 288 268 5 32 chr5 20862267 20862378 -178767772 + MIR SINE MIR 40 149 -65 989 274 72 93 chr5 20863208 20863277 -178766873 - MLT1E LTR MaLR -14 579 510 2302 94 7 0 chr5 20863277 20863585 -178766565 - AluSx SINE Alu -2 310 1 989 274 72 93 chr5 20863585 20864165 -178765985 - MLT1E LTR MaLR -83 510 9 1855 173 35 3 chr5 20864272 20864619 -178765531 - MER46B DNA MER2_type 0 236 4 355 325 96 37 chr5 20864661 20864779 -178765371 - L2 LINE L2 -164 3149 3015 1948 129 26 59 chr5 20864779 20865167 -178764983 - THE1C LTR MaLR 0 375 1 355 325 96 37 chr5 20865167 20865236 -178764914 - L2 LINE L2 -298 3015 2951 384 318 221 21 chr5 20865260 20865366 -178764784 - L2 LINE L2 -529 2785 2701 4631 30 4 4 chr5 20865366 20865924 -178764226 + LTR6B LTR ERV1 1 558 0 384 318 221 21 chr5 20865924 20866147 -178764003 - L2 LINE L2 -612 2702 2390 257 381 36 7 chr5 20866172 20866311 -178763839 - L2 LINE L2 -1167 2147 2005 182 279 47 100 chr5 20866359 20866434 -178763716 - L2 LINE L2 -2156 1158 1081 2190 111 0 16 chr5 20866434 20866749 -178763401 + AluSg SINE Alu 1 310 0 182 279 47 100 chr5 20866749 20866863 -178763287 - L2 LINE L2 -2233 1081 979 1292 168 50 0 chr5 20866863 20867101 -178763049 + MER31A LTR ERV1 1 250 -235 22 0 0 0 chr5 20867372 20867394 -178762756 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 20867453 20867481 -178762669 + AT_rich Low_complexity Low_complexity 1 28 0 4775 62 0 0 chr5 20867483 20868081 -178762069 + L1PA7 LINE L1 5557 6154 0 1375 179 57 24 chr5 20868111 20868408 -178761742 + AluSg SINE Alu 1 307 -3 2466 161 52 0 chr5 20869102 20869543 -178760607 - Tigger1 DNA MER2_type 0 2418 1955 2523 197 30 8 chr5 20869563 20870065 -178760085 - Tigger1 DNA MER2_type -1902 516 4 248 105 0 0 chr5 20870100 20870138 -178760012 - MLT2A2 LTR ERVL 0 453 416 225 178 0 0 chr5 20870156 20870201 -178759949 + L1MC4 LINE L1 6659 6703 -1339 2969 74 28 0 chr5 20870209 20870601 -178759549 - MLT2A1 LTR ERVL -40 404 2 30 0 0 0 chr5 20870925 20870955 -178759195 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 20871261 20871284 -178758866 + AT_rich Low_complexity Low_complexity 1 23 0 276 370 16 16 chr5 20871830 20871957 -178758193 + L2 LINE L2 2593 2719 -595 1869 119 10 31 chr5 20871957 20872251 -178757899 + AluSx SINE Alu 1 288 -24 182 128 26 0 chr5 20872253 20872292 -178757858 + G-rich Low_complexity Low_complexity 2 41 0 325 292 99 55 chr5 20872292 20872494 -178757656 + L2 LINE L2 2703 2913 -401 385 291 38 87 chr5 20872508 20872797 -178757353 + L2 LINE L2 3021 3295 -18 2308 87 3 0 chr5 20874501 20874800 -178755350 - AluY SINE Alu -11 300 1 707 270 25 94 chr5 20875005 20875398 -178754752 - Charlie6 DNA MER1_type -12 3488 3123 215 122 0 24 chr5 20875400 20875441 -178754709 + (TA)n Simple_repeat Simple_repeat 2 41 0 333 152 10 101 chr5 20875441 20875540 -178754610 - L1MC4 LINE L1 -1339 6703 6614 1026 157 15 46 chr5 20875582 20875779 -178754371 - AluSg/x SINE Alu -27 285 95 225 198 70 23 chr5 20875974 20876060 -178754090 - L1MC4 LINE L1 -1339 6703 6614 1546 188 3 31 chr5 20876089 20876382 -178753768 - AluSx SINE Alu -27 285 1 1478 255 20 70 chr5 20876523 20877224 -178752926 + L1ME LINE L1 82 747 -5323 3182 243 35 23 chr5 20877248 20878189 -178751961 - Charlie6 DNA MER1_type -1248 2252 1301 912 214 52 128 chr5 20878196 20878589 -178751561 + MLT1A2 LTR MaLR 11 456 -1 2319 279 105 35 chr5 20878610 20879677 -178750473 - Charlie6 DNA MER1_type -2229 1271 130 2060 115 3 0 chr5 20880226 20880514 -178749636 + AluSx SINE Alu 1 289 -23 1443 172 42 103 chr5 20880611 20880979 -178749171 - MLT1D LTR MaLR 0 505 161 2173 146 33 28 chr5 20880979 20881369 -178748781 + Tigger2a DNA MER2_type 1 392 -42 450 213 13 97 chr5 20881428 20881583 -178748567 - MLT1D LTR MaLR -363 142 1 280 301 21 14 chr5 20881888 20882031 -178748119 + (TA)n Simple_repeat Simple_repeat 2 145 0 231 200 0 0 chr5 20882034 20882084 -178748066 - L1MC4 LINE L1 -1340 6702 6653 1385 269 0 3 chr5 20882151 20882463 -178747687 - MER82 DNA MER2_type -34 619 309 4692 193 34 6 chr5 20882463 20883339 -178746811 + MER54A LTR ERVL 1 901 0 1224 199 46 42 chr5 20883343 20883475 -178746675 - MER82 DNA MER2_type -344 309 179 4098 88 52 5 chr5 20883475 20884056 -178746094 - LTR14B LTR ERVK 0 608 1 1224 199 46 42 chr5 20884056 20884230 -178745920 - MER82 DNA MER2_type -474 179 2 351 0 0 0 chr5 20884285 20884324 -178745826 + (TA)n Simple_repeat Simple_repeat 1 39 0 2323 100 6 0 chr5 20884560 20884871 -178745279 + AluSp SINE Alu 1 313 0 2111 125 3 0 chr5 20885277 20885582 -178744568 - AluSx SINE Alu -6 306 1 22 0 0 0 chr5 20887952 20887974 -178742176 + AT_rich Low_complexity Low_complexity 1 22 0 2373 43 0 0 chr5 20890135 20890439 -178739711 + AluY SINE Alu 1 304 0 373 307 98 7 chr5 20890470 20890623 -178739527 - MIR SINE MIR -64 198 32 269 212 131 10 chr5 20891200 20891299 -178738851 - MIR SINE MIR -74 188 78 315 213 25 0 chr5 20892702 20892782 -178737368 - L1M4c LINE L1 -4198 2186 2105 675 197 120 0 chr5 20892792 20892934 -178737216 - FRAM SINE Alu -19 157 1 1044 243 12 52 chr5 20892943 20893406 -178736744 - L1M4c LINE L1 -4285 2099 1560 312 27 0 0 chr5 20893406 20893443 -178736707 + (TG)n Simple_repeat Simple_repeat 2 38 0 235 263 0 0 chr5 20893459 20893516 -178736634 - L1MEc LINE L1 -3961 2254 2198 425 35 0 0 chr5 20894469 20894527 -178735623 + L1PB1 LINE L1 6094 6151 0 24 67 0 0 chr5 20894903 20894948 -178735202 + AT_rich Low_complexity Low_complexity 1 45 0 622 232 16 0 chr5 20895595 20895720 -178734430 + FRAM SINE Alu 5 131 -45 423 56 0 0 chr5 20895722 20895776 -178734374 + (GGAA)n Simple_repeat Simple_repeat 2 55 0 2144 110 0 3 chr5 20898848 20899139 -178731011 - AluSx SINE Alu -22 290 1 205 268 189 37 chr5 20899297 20899461 -178730689 + L2 LINE L2 3124 3312 -1 23 33 0 0 chr5 20899797 20899827 -178730323 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr5 20899907 20899943 -178730207 + AT_rich Low_complexity Low_complexity 1 36 0 260 312 21 11 chr5 20899976 20900069 -178730081 - MER76 LTR ERV -402 286 193 551 264 46 23 chr5 20900117 20900291 -178729859 - MER76 LTR ERV -509 179 2 1008 298 156 42 chr5 20900445 20900546 -178729604 - L1MEc LINE L1 -5480 916 828 3804 130 15 40 chr5 20900546 20901269 -178728881 - L1MA4 LINE L1 -3 6297 5593 1008 298 156 42 chr5 20901269 20901955 -178728195 - L1MEc LINE L1 -5568 828 39 22 56 0 0 chr5 20903173 20903209 -178726941 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 20903407 20903436 -178726714 + AT_rich Low_complexity Low_complexity 1 29 0 246 261 37 80 chr5 20903783 20903971 -178726179 - L1ME LINE L1 -265 5856 5677 275 301 29 6 chr5 20904156 20904329 -178725821 - L1P5 LINE L1 -710 5441 5265 28 0 0 0 chr5 20904406 20904434 -178725716 + AT_rich Low_complexity Low_complexity 1 28 0 5527 223 76 21 chr5 20904434 20905018 -178725132 + L1MC3 LINE L1 6206 6757 -1028 192 40 0 0 chr5 20905018 20905043 -178725107 + (CA)n Simple_repeat Simple_repeat 2 26 0 5527 223 76 21 chr5 20905043 20905951 -178724199 + L1MC3 LINE L1 6757 7779 -6 363 117 0 0 chr5 20906624 20906684 -178723466 - L1MA3 LINE L1 0 6305 6246 709 114 53 0 chr5 20906699 20906831 -178723319 - L1PA13 LINE L1 0 6163 6025 308 259 53 53 chr5 20907428 20907559 -178722591 + MLT1H LTR MaLR 25 155 -394 30 0 0 0 chr5 20908009 20908039 -178722111 + AT_rich Low_complexity Low_complexity 1 30 0 40640 44 39 1 chr5 20908598 20914525 -178715625 + L1HS LINE L1 2 6155 0 22 56 0 0 chr5 20915320 20915356 -178714794 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 20915554 20915583 -178714567 + AT_rich Low_complexity Low_complexity 1 29 0 246 261 37 80 chr5 20915930 20916118 -178714032 - L1ME LINE L1 -265 5856 5677 275 301 29 6 chr5 20916303 20916476 -178713674 - L1P5 LINE L1 -710 5441 5265 28 0 0 0 chr5 20916553 20916581 -178713569 + AT_rich Low_complexity Low_complexity 1 28 0 5527 223 76 21 chr5 20916581 20917165 -178712985 + L1MC3 LINE L1 6206 6757 -1028 192 40 0 0 chr5 20917165 20917190 -178712960 + (CA)n Simple_repeat Simple_repeat 2 26 0 5527 223 76 21 chr5 20917190 20918098 -178712052 + L1MC3 LINE L1 6757 7779 -6 363 117 0 0 chr5 20918771 20918831 -178711319 - L1MA3 LINE L1 0 6305 6246 709 114 53 0 chr5 20918846 20918978 -178711172 - L1PA13 LINE L1 0 6163 6025 308 259 53 53 chr5 20919575 20919706 -178710444 + MLT1H LTR MaLR 25 155 -394 30 0 0 0 chr5 20920156 20920186 -178709964 + AT_rich Low_complexity Low_complexity 1 30 0 207 234 0 0 chr5 20921145 20921222 -178708928 + CT-rich Low_complexity Low_complexity 2 78 0 390 294 22 50 chr5 20921922 20922102 -178708048 + L1MC4 LINE L1 6458 6632 -1410 598 219 63 85 chr5 20922111 20922181 -178707969 + L1MC4 LINE L1 6860 6930 -961 215 30 0 30 chr5 20922181 20922214 -178707936 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 598 219 63 85 chr5 20922214 20922535 -178707615 + L1MC4 LINE L1 6930 7395 -496 2171 91 0 14 chr5 20923178 20923474 -178706676 + AluSp SINE Alu 1 292 -21 33 56 0 0 chr5 20923716 20923770 -178706380 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr5 20924027 20924055 -178706095 + AT_rich Low_complexity Low_complexity 1 28 0 237 316 105 13 chr5 20924477 20924629 -178705521 - L2 LINE L2 -1232 2082 1917 25 0 0 0 chr5 20924650 20924675 -178705475 + AT_rich Low_complexity Low_complexity 1 25 0 187 387 0 0 chr5 20924833 20924895 -178705255 + MIR SINE MIR 65 126 -136 21 36 0 0 chr5 20926742 20926770 -178703380 + AT_rich Low_complexity Low_complexity 1 28 0 2082 117 30 0 chr5 20926876 20927176 -178702974 + AluSc SINE Alu 1 309 0 288 182 0 0 chr5 20928519 20928574 -178701576 - MLT1E2 LTR MaLR -1 625 571 1561 274 30 62 chr5 20929518 20930127 -178700023 + MLT1E LTR MaLR 5 593 0 665 281 36 5 chr5 20930391 20930587 -178699563 - MER20 DNA MER1_type -17 202 1 37 23 0 0 chr5 20930889 20930933 -178699217 + AT_rich Low_complexity Low_complexity 1 44 0 443 331 43 46 chr5 20931046 20931396 -178698754 + ERVL LTR ERVL 3806 4154 -1610 2365 134 3 6 chr5 20931412 20931777 -178698373 - THE1B LTR MaLR 0 364 1 1161 183 58 6 chr5 20932001 20932436 -178697714 - LTR54 LTR ERV1 0 510 1 2265 213 104 19 chr5 20932601 20933175 -178696975 + MER67B LTR ERV1 39 661 0 771 172 161 33 chr5 20933604 20933986 -178696164 - LTR54B LTR ERV1 -37 461 1 338 254 113 54 chr5 20934174 20934359 -178695791 + LTR33A LTR ERVL 321 516 -7 684 226 0 0 chr5 20934390 20934514 -178695636 + FLAM_A SINE Alu 2 125 -8 296 232 14 14 chr5 20934546 20934684 -178695466 + (TA)n Simple_repeat Simple_repeat 2 139 0 200 197 0 33 chr5 20935342 20935403 -178694747 + (TATATG)n Simple_repeat Simple_repeat 6 64 0 323 325 98 31 chr5 20935708 20935994 -178694156 - L1MC4 LINE L1 -25 8017 7713 630 65 37 19 chr5 20936064 20936172 -178693978 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 962 260 82 11 chr5 20936176 20936457 -178693693 - AluJb SINE Alu -1 301 1 643 289 12 6 chr5 20936458 20936624 -178693526 - MER110 LTR ERV1 -264 227 61 345 78 182 39 chr5 20937582 20937659 -178692491 + MSTB LTR MaLR 1 88 -338 319 304 112 0 chr5 20937659 20937820 -178692330 - MER69 DNA AcHobo -854 372 194 767 271 102 24 chr5 20937888 20938458 -178691692 + L1MC2 LINE L1 3445 4169 -1977 * 31503 109 11 36 chr5 20938454 20944531 -178685619 + L1PA7 LINE L1 223 6467 -2 666 257 53 5 chr5 20944699 20944905 -178685245 + L1MC2 LINE L1 4733 4948 -1198 4924 183 41 43 chr5 20945023 20945930 -178684220 + L1MC2 LINE L1 4925 5832 -512 1662 193 6 3 chr5 20945930 20946241 -178683909 + AluJb SINE Alu 1 312 0 4924 183 41 43 chr5 20946241 20946262 -178683888 + L1MC2 LINE L1 5832 5852 -492 2305 117 0 0 chr5 20946262 20946571 -178683579 + AluSg SINE Alu 1 309 -1 195 42 0 0 chr5 20946576 20946600 -178683550 + (GA)n Simple_repeat Simple_repeat 1 24 0 4924 183 41 43 chr5 20946600 20947088 -178683062 + L1MC2 LINE L1 5856 6344 0 189 242 121 15 chr5 20948037 20948103 -178682047 + MIR SINE MIR 170 242 -20 195 42 0 0 chr5 20949888 20949912 -178680238 + (TG)n Simple_repeat Simple_repeat 2 25 0 211 234 21 0 chr5 20949926 20949973 -178680177 + (CATATA)n Simple_repeat Simple_repeat 6 53 0 225 0 0 0 chr5 20949979 20950004 -178680146 + (TG)n Simple_repeat Simple_repeat 2 26 0 2200 119 0 13 chr5 20951510 20951822 -178678328 - AluSc SINE Alu 0 309 2 378 283 14 86 chr5 20952102 20952381 -178677769 + MLT1L LTR MaLR 46 304 -311 282 310 39 8 chr5 20952493 20952622 -178677528 + MLT1L LTR MaLR 470 602 -13 243 406 0 10 chr5 20953648 20953749 -178676401 + L2 LINE L2 3173 3272 0 234 328 35 52 chr5 20954100 20954216 -178675934 - MER5B DNA MER1_type -63 115 2 254 307 92 31 chr5 20954639 20954802 -178675348 + MIR SINE MIR 88 260 -2 200 297 0 77 chr5 20955067 20955158 -178674992 - L2 LINE L2 0 3313 3230 213 164 36 55 chr5 20955609 20955664 -178674486 - L2 LINE L2 -670 2644 2591 1155 247 29 47 chr5 20955813 20956153 -178673997 + MLT1B LTR MaLR 5 338 -52 1890 127 3 41 chr5 20956719 20957047 -178673103 + AluSx SINE Alu 1 317 0 2024 187 16 28 chr5 20957324 20957777 -178672373 + MSTB LTR MaLR 6 425 -1 8290 208 15 7 chr5 20957779 20959415 -178670735 + MSTB-int LTR MaLR 2 1651 0 2480 160 12 14 chr5 20959415 20959840 -178670310 + MSTB LTR MaLR 1 424 -2 206 385 66 0 chr5 20960015 20960137 -178670013 + MIR SINE MIR 54 183 -79 438 20 0 0 chr5 20960200 20960251 -178669899 + (CA)n Simple_repeat Simple_repeat 2 52 0 2884 141 42 4 chr5 20961057 20961552 -178668598 - MER75 DNA T2_type 0 514 1 1448 220 43 12 chr5 20961621 20961948 -178668202 + MER1B DNA MER1_type 1 337 0 24 32 0 0 chr5 20962074 20962105 -178668045 + AT_rich Low_complexity Low_complexity 1 31 0 24 67 0 0 chr5 20962493 20962538 -178667612 + AT_rich Low_complexity Low_complexity 1 45 0 3071 94 4 58 chr5 20962747 20963099 -178667051 - L1MA2 LINE L1 0 6304 5989 2304 96 0 0 chr5 20963099 20963390 -178666760 - AluSg SINE Alu -9 301 11 3071 94 4 58 chr5 20963390 20963570 -178666580 - L1MA2 LINE L1 -315 5989 5801 1791 174 22 17 chr5 20963746 20964108 -178666042 - L1 LINE L1 -1372 4774 4411 2038 113 6 41 chr5 20964108 20964296 -178665854 - AluSq SINE Alu -6 307 133 5305 153 30 45 chr5 20964296 20965382 -178664768 + MER11C LTR ERVK 1 1070 -1 2038 113 6 41 chr5 20965382 20965511 -178664639 - AluSq SINE Alu -180 133 1 385 71 29 0 chr5 20965525 20965595 -178664555 + L1MA7 LINE L1 6220 6291 0 1781 188 16 24 chr5 20965924 20966307 -178663843 + MLT1B LTR MaLR 3 382 -8 639 228 49 38 chr5 20966428 20966612 -178663538 + MER5A DNA MER1_type 4 189 0 255 264 107 41 chr5 20966778 20966899 -178663251 - Charlie8 DNA MER1_type -2273 144 16 2021 136 0 0 chr5 20967036 20967347 -178662803 + AluSg SINE Alu 1 311 0 2340 89 0 10 chr5 20970326 20970639 -178659511 + AluSx SINE Alu 1 310 -2 874 287 15 42 chr5 20971543 20971878 -178658272 + MLT2C1 LTR ERVL 13 338 -59 1548 237 62 21 chr5 20972024 20972492 -178657658 - MLT1D LTR MaLR -18 487 1 29 0 0 0 chr5 20972623 20972652 -178657498 + AT_rich Low_complexity Low_complexity 1 29 0 1454 234 33 9 chr5 20973076 20973405 -178656745 - MLT1A1 LTR MaLR -28 337 1 1387 164 194 10 chr5 20974357 20974650 -178655500 - MER47A DNA MER2_type 0 366 20 1050 33 8 0 chr5 20974986 20975108 -178655042 + AluY SINE Alu 1 123 -188 556 201 49 10 chr5 20975212 20975416 -178654734 + AluY SINE Alu 89 300 -11 1484 185 34 27 chr5 20975698 20975990 -178654160 - AluSx SINE Alu -18 294 1 21 57 0 0 chr5 20975996 20976031 -178654119 + AT_rich Low_complexity Low_complexity 1 35 0 1958 117 0 0 chr5 20976443 20976716 -178653434 - AluSg SINE Alu -37 273 1 326 304 31 62 chr5 20976878 20977039 -178653111 - L2 LINE L2 0 3313 3158 252 301 22 44 chr5 20977216 20977352 -178652798 + L2 LINE L2 3009 3141 -172 419 233 50 76 chr5 20978952 20979124 -178651026 + MLT1E2 LTR MaLR 82 260 -264 409 215 47 56 chr5 20979175 20979282 -178650868 + MLT1E2 LTR MaLR 391 496 -130 234 91 0 0 chr5 20979305 20979338 -178650812 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 4559 204 8 70 chr5 20979338 20980547 -178649603 + L1P LINE L1 2466 3599 -2547 21 36 0 0 chr5 20980671 20980699 -178649451 + AT_rich Low_complexity Low_complexity 1 28 0 865 229 61 109 chr5 20982885 20983126 -178647024 - MER67C LTR ERV1 -4 706 455 2132 96 10 3 chr5 20983126 20983429 -178646721 - AluY SINE Alu -6 305 1 1470 186 0 41 chr5 20983439 20983734 -178646416 - AluJo SINE Alu -22 290 8 865 229 61 109 chr5 20983734 20984102 -178646048 - MER67C LTR ERV1 -264 446 116 546 274 68 32 chr5 20984225 20984605 -178645545 - Charlie2 DNA MER1_type -1 2861 2468 820 205 10 10 chr5 20984753 20984948 -178645202 - Charlie2 DNA MER1_type -636 2226 2032 275 257 29 29 chr5 20984981 20985032 -178645118 - Charlie2 DNA MER1_type -897 1965 1915 216 0 0 0 chr5 20985032 20985056 -178645094 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 275 257 29 29 chr5 20985056 20985109 -178645041 - Charlie2 DNA MER1_type -946 1916 1861 444 273 122 63 chr5 20985124 20985410 -178644740 - Charlie2 DNA MER1_type -2465 317 15 1855 151 6 39 chr5 20985617 20985928 -178644222 - AluSx SINE Alu -11 301 1 1052 178 17 0 chr5 20985993 20986167 -178643983 + AluJb SINE Alu 117 293 -19 1668 204 14 19 chr5 20987836 20988203 -178641947 - MER89 LTR ERV1 0 559 195 264 183 11 86 chr5 20988175 20988268 -178641882 - MER89 LTR ERV1 -473 86 1 * 226 309 22 43 chr5 20988839 20988978 -178641172 + MLT1I LTR MaLR 11 146 -263 2154 126 0 0 chr5 20989224 20989517 -178640633 - AluSg SINE Alu -17 293 1 342 0 0 0 chr5 20990872 20990910 -178639240 + (TG)n Simple_repeat Simple_repeat 1 38 0 517 272 82 31 chr5 20992127 20992322 -178637828 - MLT1J2 LTR MaLR -6 444 240 1480 212 0 0 chr5 20992977 20993236 -178636914 + AluSq SINE Alu 1 259 -54 5488 57 48 8 chr5 20994410 20995145 -178635005 + L1PA6 LINE L1 5390 6153 -1 659 165 38 8 chr5 20995858 20995991 -178634159 - LTR3b LTR ERVK -47 453 317 4630 159 31 43 chr5 20995991 20997341 -178632809 - HERVK3 LTR ERVK -384 5561 1321 427 255 0 31 chr5 20997329 20997427 -178632723 - HERVK3 LTR ERVK -6563 680 586 * 636 241 89 15 chr5 20997483 20997686 -178632464 - HERVK3 LTR ERVK -6971 272 55 264 127 254 0 chr5 20997750 20997805 -178632345 - HERVK3 LTR ERVK -7025 218 150 219 182 36 0 chr5 20997898 20997953 -178632197 + (CTACT)n Simple_repeat Simple_repeat 4 60 0 562 230 179 63 chr5 20998341 20998676 -178631474 - MLT1A2 LTR MaLR 0 374 1 219 170 0 0 chr5 21001591 21001638 -178628512 + (TA)n Simple_repeat Simple_repeat 2 48 0 30 0 0 0 chr5 21002408 21002438 -178627712 + AT_rich Low_complexity Low_complexity 1 30 0 228 35 0 0 chr5 21002951 21002980 -178627170 + (TA)n Simple_repeat Simple_repeat 2 30 0 21 82 0 0 chr5 21003451 21003500 -178626650 + AT_rich Low_complexity Low_complexity 1 49 0 1209 229 10 10 chr5 21003629 21003917 -178626233 + AluJo SINE Alu 1 288 -24 430 277 111 65 chr5 21004241 21004566 -178625584 + L1ME1 LINE L1 1093 1432 -4994 509 209 0 9 chr5 21004655 21004765 -178625385 + L1ME1 LINE L1 4388 4496 -1930 22 0 0 0 chr5 21004844 21004866 -178625284 + AT_rich Low_complexity Low_complexity 1 22 0 1645 181 64 61 chr5 21004962 21005169 -178624981 - LTR57 LTR ERVL 0 411 201 2573 48 0 0 chr5 21005169 21005479 -178624671 - AluY SINE Alu -1 310 1 1645 181 64 61 chr5 21005479 21005680 -178624470 - LTR57 LTR ERVL -210 201 2 276 257 89 46 chr5 21005792 21006029 -178624121 + L1ME1 LINE L1 4737 4983 -1443 216 130 0 43 chr5 21006044 21006090 -178624060 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 954 291 64 15 chr5 21006128 21006520 -178623630 + L1ME1 LINE L1 6031 6441 -5 2165 102 0 10 chr5 21006839 21007152 -178622998 - AluSg SINE Alu 0 310 1 23 33 0 0 chr5 21007257 21007287 -178622863 + AT_rich Low_complexity Low_complexity 1 30 0 22 70 0 0 chr5 21007469 21007512 -178622638 + AT_rich Low_complexity Low_complexity 1 43 0 216 265 231 34 chr5 21008822 21008939 -178621211 + MER5B DNA MER1_type 4 143 -35 2328 60 0 0 chr5 21009026 21009328 -178620822 - L1PA5 LINE L1 0 6154 5853 2162 38 0 4 chr5 21009328 21009591 -178620559 + L1PA5 LINE L1 5600 5861 -293 22 0 0 0 chr5 21009597 21009619 -178620531 + AT_rich Low_complexity Low_complexity 1 22 0 205 171 0 0 chr5 21009840 21009875 -178620275 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 937 308 68 16 chr5 21009955 21010381 -178619769 + MLT1J LTR MaLR 4 451 -60 202 258 15 45 chr5 21010383 21010449 -178619701 + MER5B DNA MER1_type 3 66 -112 1953 137 7 0 chr5 21010950 21011242 -178618908 - AluSx SINE Alu -18 294 1 30 93 0 0 chr5 21011322 21011408 -178618742 + AT_rich Low_complexity Low_complexity 1 86 0 1096 253 133 41 chr5 21012809 21013327 -178616823 - MLT1F1 LTR MaLR -2 565 3 213 318 73 9 chr5 21013380 21013490 -178616660 + L2 LINE L2 854 970 -2344 333 279 152 44 chr5 21013543 21013701 -178616449 + MER5B DNA MER1_type 1 175 -3 804 240 55 10 chr5 21013759 21013959 -178616191 + MER58A DNA MER1_type 4 212 -12 267 31 0 0 chr5 21013997 21014029 -178616121 + (TC)n Simple_repeat Simple_repeat 1 32 0 266 297 52 58 chr5 21014689 21014844 -178615306 - HAL1 LINE L1 -2043 464 311 666 193 183 67 chr5 21014949 21015342 -178614808 - MER31B LTR ERV1 0 514 1 1796 179 105 10 chr5 21015412 21015803 -178614347 - MSTA LTR MaLR 0 428 1 1901 150 29 42 chr5 21015835 21016215 -178613935 + THE1C LTR MaLR 1 375 0 213 226 0 0 chr5 21016291 21016344 -178613806 + (CATATA)n Simple_repeat Simple_repeat 5 57 0 599 244 93 39 chr5 21016539 21016797 -178613353 - MER20B DNA MER1_type -278 505 234 2215 115 3 0 chr5 21017510 21017822 -178612328 - AluSp SINE Alu 0 313 1 729 256 112 48 chr5 21017882 21018174 -178611976 + MER65A LTR ERV1 1 330 -115 2052 131 150 5 chr5 21018174 21018548 -178611602 + MSTA LTR MaLR 1 428 0 729 256 112 48 chr5 21018548 21018673 -178611477 + MER65A LTR ERV1 330 445 0 448 230 0 0 chr5 21018940 21019040 -178611110 + LTR23-int LTR ERV1 891 990 -4133 304 204 186 9 chr5 21019042 21019155 -178610995 + MER34C LTR ERV1 160 292 -293 862 246 83 102 chr5 21019207 21020648 -178609502 + LTR23-int LTR ERV1 1161 2573 -2550 384 236 18 9 chr5 21020646 21020756 -178609394 + LTR23-int LTR ERV1 2481 2591 -2345 * 1773 282 45 53 chr5 21020763 21021515 -178608635 + L1PA12 LINE L1 2 747 -6834 5679 111 31 9 chr5 21021517 21022389 -178607761 + L1PA15 LINE L1 5275 6165 0 1315 161 113 127 chr5 21022449 21023008 -178607142 + LTR23-int LTR ERV1 4026 4576 -1755 207 316 79 40 chr5 21124130 21124282 -178505868 + L2 LINE L2 2355 2512 -802 262 347 100 44 chr5 21124317 21124588 -178505562 + L2 LINE L2 2592 2877 -437 245 348 104 0 chr5 21124748 21124912 -178505238 + L2 LINE L2 3131 3311 -2 257 92 123 77 chr5 21125263 21125328 -178504822 + L1ME LINE L1 5795 5862 -304 4262 215 45 12 chr5 21125472 21125672 -178504478 + L1PB4 LINE L1 4184 4376 -1778 360 0 0 0 chr5 21125672 21125712 -178504438 + (CA)n Simple_repeat Simple_repeat 1 40 0 4262 215 45 12 chr5 21125712 21126719 -178503431 + L1PB4 LINE L1 4376 5429 -725 2420 108 11 19 chr5 21126729 21127107 -178503043 - THE1C LTR MaLR 0 375 1 22 94 0 0 chr5 21127452 21127516 -178502634 + AT_rich Low_complexity Low_complexity 1 64 0 2328 199 12 52 chr5 21127518 21128371 -178501779 - L1PB4 LINE L1 -613 5543 4731 1184 164 36 87 chr5 21128364 21128699 -178501451 + L1PB4 LINE L1 5538 5855 -301 * 817 233 11 0 chr5 21128714 21128890 -178501260 - MSTD LTR MaLR 0 396 219 24 32 0 0 chr5 21129054 21129085 -178501065 + AT_rich Low_complexity Low_complexity 1 31 0 831 202 26 16 chr5 21130512 21130705 -178499445 - L1MA7 LINE L1 -166 6125 5931 694 171 53 35 chr5 21130702 21130872 -178499278 + L1MA7 LINE L1 6119 6291 0 * 1343 234 33 17 chr5 21131095 21131454 -178498696 - MLT1A1 LTR MaLR 0 365 1 1965 196 25 20 chr5 21131454 21131862 -178498288 - MLT1A1-int LTR MaLR 0 1735 1326 2188 238 72 30 chr5 21132212 21132971 -178497179 - MLT1A1-int LTR MaLR -488 883 1 704 245 39 10 chr5 21132982 21133186 -178496964 - MLT1A1 LTR MaLR -11 354 145 718 219 5 23 chr5 21133186 21133401 -178496749 + L1MA4 LINE L1 6087 6297 -3 23 68 0 0 chr5 21133469 21133513 -178496637 + AT_rich Low_complexity Low_complexity 1 44 0 364 256 22 6 chr5 21133618 21133743 -178496407 - MLT1J2 LTR MaLR -208 201 78 405 0 0 0 chr5 21135271 21135316 -178494834 + (CA)n Simple_repeat Simple_repeat 2 46 0 21 71 0 0 chr5 21135602 21135644 -178494506 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr5 21136637 21136662 -178493488 + AT_rich Low_complexity Low_complexity 1 25 0 932 217 157 6 chr5 21137786 21138185 -178491965 + MLT2B1 LTR ERVL 1 515 0 2341 62 3 3 chr5 21138324 21138651 -178491499 + AluY SINE Alu 1 311 0 21 0 0 0 chr5 21138718 21138739 -178491411 + AT_rich Low_complexity Low_complexity 1 21 0 449 328 74 55 chr5 21139429 21139795 -178490355 + L2 LINE L2 2927 3299 -14 26 50 0 0 chr5 21139967 21140007 -178490143 + AT_rich Low_complexity Low_complexity 1 40 0 31 58 0 0 chr5 21140213 21140265 -178489885 + AT_rich Low_complexity Low_complexity 1 52 0 23 0 0 0 chr5 21140422 21140445 -178489705 + AT_rich Low_complexity Low_complexity 1 23 0 2064 108 0 0 chr5 21140445 21140731 -178489419 - AluSx SINE Alu -26 286 1 27 0 0 0 chr5 21140949 21140976 -178489174 + AT_rich Low_complexity Low_complexity 1 27 0 29 0 0 0 chr5 21141362 21141391 -178488759 + AT_rich Low_complexity Low_complexity 1 29 0 1325 162 40 166 chr5 21142238 21142471 -178487679 + MSTD LTR MaLR 3 153 -243 1903 119 3 44 chr5 21142471 21142790 -178487360 + AluSq SINE Alu 1 306 -7 1325 162 40 166 chr5 21142790 21143007 -178487143 + MSTD LTR MaLR 153 396 0 207 0 0 0 chr5 21143040 21143063 -178487087 + (T)n Simple_repeat Simple_repeat 1 23 0 273 175 16 0 chr5 21143565 21143628 -178486522 - L1MC4 LINE L1 -1339 6703 6640 2527 281 77 23 chr5 21144676 21145868 -178484282 + L1MA8 LINE L1 1753 2994 -4174 9759 194 55 29 chr5 21145876 21146713 -178483437 + L1MA8 LINE L1 3197 4011 -3301 1942 154 0 0 chr5 21146713 21147011 -178483139 + AluSx SINE Alu 1 298 -14 9759 194 55 29 chr5 21147011 21149656 -178480494 + L1MA8 LINE L1 4011 6805 -507 342 0 0 0 chr5 21149656 21149694 -178480456 + (CA)n Simple_repeat Simple_repeat 2 39 0 9759 194 55 29 chr5 21149694 21150206 -178479944 + L1MA8 LINE L1 6805 7302 -10 258 362 68 34 chr5 21151222 21151429 -178478721 + MIR SINE MIR 25 238 -24 25 51 0 0 chr5 21152143 21152182 -178477968 + AT_rich Low_complexity Low_complexity 1 39 0 28 0 0 0 chr5 21152651 21152679 -178477471 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 21152716 21152739 -178477411 + AT_rich Low_complexity Low_complexity 1 23 0 3373 99 16 4 chr5 21152763 21153257 -178476893 - L1PA13 LINE L1 -4 6159 5660 3599 115 46 7 chr5 21153257 21153961 -178476189 - L1PA12 LINE L1 -334 5834 5097 537 210 0 16 chr5 21154255 21154379 -178475771 - L1MA8 LINE L1 -6 6285 6164 336 379 51 27 chr5 21155293 21155586 -178474564 + L2 LINE L2 3014 3313 0 21 23 0 47 chr5 21155662 21155684 -178474466 + AT_rich Low_complexity Low_complexity 1 22 -19 1543 184 0 4 chr5 21155684 21155951 -178474199 + AluJo SINE Alu 21 286 -26 21 23 0 47 chr5 21155951 21155971 -178474179 + AT_rich Low_complexity Low_complexity 22 41 0 27 29 0 0 chr5 21156543 21156577 -178473573 + AT_rich Low_complexity Low_complexity 1 34 0 351 0 0 0 chr5 21157135 21157174 -178472976 + (TG)n Simple_repeat Simple_repeat 1 39 0 1476 219 92 16 chr5 21157235 21157669 -178472481 - MLT1C LTR MaLR 0 467 1 393 256 20 94 chr5 21159054 21159257 -178470893 - LTR41 LTR ERVL -11 762 575 27 0 0 0 chr5 21161128 21161155 -178468995 + AT_rich Low_complexity Low_complexity 1 27 0 1877 77 4 0 chr5 21161487 21161735 -178468415 + L1PA6 LINE L1 5902 6150 -4 1930 259 99 34 chr5 21163795 21164608 -178465542 - L1M4 LINE L1 -989 5157 4268 2313 74 16 22 chr5 21164608 21164920 -178465230 - AluY SINE Alu -1 310 1 1930 259 99 34 chr5 21164920 21165089 -178465061 - L1M4 LINE L1 -1878 4268 4111 596 232 53 68 chr5 21165271 21165534 -178464616 - LTR4 LTR ERV1 -7 589 331 497 260 25 55 chr5 21165738 21165938 -178464212 - LTR4 LTR ERV1 -396 200 7 509 298 105 41 chr5 21166108 21166672 -178463478 - L1M4 LINE L1 -2579 3567 2968 * 758 282 55 42 chr5 21166668 21167126 -178463024 + L1MCa LINE L1 861 1324 -5102 241 188 25 25 chr5 21168146 21168226 -178461924 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 252 235 50 76 chr5 21168272 21168391 -178461759 - LTR28 LTR ERV1 0 1020 905 588 222 54 36 chr5 21168476 21168643 -178461507 - LTR28 LTR ERV1 -446 574 405 357 313 19 19 chr5 21168742 21168902 -178461248 - LTR1B LTR ERV1 -628 198 39 25 31 0 0 chr5 21169140 21169172 -178460978 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr5 21169337 21169369 -178460781 + AT_rich Low_complexity Low_complexity 1 32 0 280 333 0 0 chr5 21170005 21170107 -178460043 + GA-rich Low_complexity Low_complexity 2 103 0 28 0 0 0 chr5 21170950 21170978 -178459172 + AT_rich Low_complexity Low_complexity 1 28 0 1687 148 50 4 chr5 21171153 21171431 -178458719 + AluSx SINE Alu 1 291 -21 2228 253 68 15 chr5 21172748 21173532 -178456618 + MER99 DNA DNA 3 827 -1 253 322 142 27 chr5 21174275 21174458 -178455692 + MLT1J LTR MaLR 5 208 -303 318 235 61 10 chr5 21174609 21174707 -178455443 + MLT1J LTR MaLR 395 497 -14 258 322 0 11 chr5 21176176 21176266 -178453884 + MLT1J LTR MaLR 124 212 -299 3296 192 89 25 chr5 21176952 21177873 -178452277 - L1MB5 LINE L1 -8 6166 5184 1339 215 91 14 chr5 21177876 21178229 -178451921 + MLT1B LTR MaLR 11 390 0 5033 251 35 70 chr5 21178251 21180563 -178449587 - L1MB5 LINE L1 -981 5165 2935 482 218 158 57 chr5 21180591 21180940 -178449210 + L1MC5 LINE L1 7518 7901 -60 13125 147 29 28 chr5 21181726 21184141 -178446009 + Tigger1 DNA MER2_type 1 2418 0 213 267 0 27 chr5 21184141 21184216 -178445934 + (TA)n Simple_repeat Simple_repeat 2 74 0 1203 104 42 10 chr5 21184216 21184408 -178445742 - Tigger1 DNA MER2_type -140 2278 2081 436 228 89 13 chr5 21184424 21184582 -178445568 - MER3 DNA MER1_type -86 123 1 2077 116 7 3 chr5 21187952 21188262 -178441888 - AluSx SINE Alu -1 311 1 2178 84 10 13 chr5 21188276 21188575 -178441575 - AluSp SINE Alu 0 313 16 2620 52 0 0 chr5 21188963 21189273 -178440877 - AluY SINE Alu -1 310 1 6770 20 23 0 chr5 21189902 21190700 -178439450 - L1PA3 LINE L1 0 6155 5340 * 10074 31 1 2 chr5 21190690 21191941 -178438209 + L1P LINE L1 4126 5377 -779 1804 258 41 15 chr5 21192318 21192370 -178437780 + MLT1D LTR MaLR 26 75 -430 745 228 147 54 chr5 21192370 21192704 -178437446 + MLT1A1 LTR MaLR 1 365 0 1804 258 41 15 chr5 21192704 21193117 -178437033 + MLT1D LTR MaLR 75 503 -2 21 36 0 0 chr5 21194569 21194597 -178435553 + AT_rich Low_complexity Low_complexity 1 28 0 25 83 0 0 chr5 21195161 21195221 -178434929 + AT_rich Low_complexity Low_complexity 1 60 0 1963 85 72 17 chr5 21195386 21195679 -178434471 - AluY SINE Alu -2 309 1 227 371 88 24 chr5 21195728 21196057 -178434093 + L2 LINE L2 2441 2790 -524 204 39 0 118 chr5 21196365 21196416 -178433734 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 758 235 6 0 chr5 21197259 21197421 -178432729 - FRAM SINE Alu -3 163 1 273 257 162 29 chr5 21197594 21197730 -178432420 - L2 LINE L2 -1 3312 3159 1789 221 89 7 chr5 21197922 21198369 -178431781 - MLT1D LTR MaLR -1 504 21 280 247 0 14 chr5 21198481 21198554 -178431596 + GA-rich Low_complexity Low_complexity 2 73 0 25 65 0 0 chr5 21199204 21199250 -178430900 + AT_rich Low_complexity Low_complexity 1 46 0 817 288 66 35 chr5 21199262 21199359 -178430791 - Charlie7 DNA MER1_type -1320 1292 1199 958 55 40 0 chr5 21199359 21199559 -178430591 + (TAGA)n Simple_repeat Simple_repeat 1 208 0 817 288 66 35 chr5 21199559 21199855 -178430295 - Charlie7 DNA MER1_type -1413 1199 885 638 228 32 6 chr5 21199864 21200014 -178430136 + MLT1A1 LTR MaLR 228 365 0 248 361 12 0 chr5 21200028 21200111 -178430039 + L2 LINE L2 2598 2681 -633 208 200 0 40 chr5 21201147 21201197 -178428953 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 186 361 126 8 chr5 21201235 21201354 -178428796 + L2 LINE L2 3136 3268 -4 1946 107 0 11 chr5 21201594 21201855 -178428295 - AluSq SINE Alu -54 259 2 316 301 176 7 chr5 21201957 21202093 -178428057 + MIR SINE MIR 48 206 -56 2121 269 6 8 chr5 21203066 21203561 -178426589 + MER21B LTR ERV1 100 593 -270 2194 141 113 13 chr5 21203584 21203713 -178426437 + MSTA LTR MaLR 1 116 -312 1989 143 71 31 chr5 21203713 21204063 -178426087 - THE1B LTR MaLR 0 364 1 2194 141 113 13 chr5 21204063 21204322 -178425828 + MSTA LTR MaLR 116 428 0 391 232 66 137 chr5 21204328 21204569 -178425581 + MER21B LTR ERV1 613 836 -27 335 242 67 67 chr5 21205679 21205799 -178424351 + L2 LINE L2 2871 2990 -323 1001 106 0 0 chr5 21206451 21206583 -178423567 - AluSg/x SINE Alu -16 294 163 2116 92 0 34 chr5 21207624 21207759 -178422391 + AluSc SINE Alu 1 139 -170 2432 67 0 0 chr5 21207759 21208056 -178422094 + AluY SINE Alu 1 297 -14 441 0 0 0 chr5 21208058 21208107 -178422043 + (CA)n Simple_repeat Simple_repeat 2 50 0 2116 92 0 34 chr5 21208107 21208260 -178421890 + AluSc SINE Alu 140 282 -27 1886 201 28 25 chr5 21208483 21208916 -178421234 - MER101 LTR ERV1 -30 444 11 1867 182 23 11 chr5 21209044 21209395 -178420755 - MLT1A1 LTR MaLR 0 365 11 191 204 130 0 chr5 21210245 21210299 -178419851 - MIR3 SINE MIR -25 183 123 288 111 0 0 chr5 21210784 21210829 -178419321 + (TG)n Simple_repeat Simple_repeat 2 46 0 365 299 56 0 chr5 21211998 21212105 -178418045 + MIR3 SINE MIR 46 158 -50 261 325 97 26 chr5 21212114 21212268 -178417882 + MER5B DNA MER1_type 8 172 -6 190 169 0 26 chr5 21213018 21213095 -178417055 + (TA)n Simple_repeat Simple_repeat 1 75 0 228 401 20 7 chr5 21213640 21213787 -178416363 - L2 LINE L2 -2 3270 3122 816 130 20 175 chr5 21214013 21214259 -178415891 - MER2 DNA MER2_type -136 209 2 367 350 51 47 chr5 21214393 21214607 -178415543 - L2 LINE L2 -454 2860 2646 2403 116 8 30 chr5 21215702 21216074 -178414076 - THE1B LTR MaLR 0 364 1 198 296 19 0 chr5 21216569 21216623 -178413527 - L2 LINE L2 -15 3257 3203 1738 168 3 14 chr5 21217018 21217315 -178412835 + AluJb SINE Alu 1 294 -18 259 286 134 36 chr5 21217347 21217571 -178412579 - MIR SINE MIR -10 252 7 1955 152 0 20 chr5 21218113 21218416 -178411734 - AluSx SINE Alu -13 299 3 438 189 89 0 chr5 21218619 21218751 -178411399 + FLAM_A SINE Alu 21 160 0 1413 155 24 40 chr5 21219505 21219757 -178410393 - AluJo SINE Alu -32 280 33 564 280 30 6 chr5 21219865 21220033 -178410117 - L1ME1 LINE L1 -20 6146 5975 484 251 92 26 chr5 21220033 21220228 -178409922 - L2 LINE L2 -412 2902 2695 735 214 50 23 chr5 21220240 21220456 -178409694 + L1MC4a LINE L1 6401 6630 -1155 198 103 0 0 chr5 21220458 21220487 -178409663 + (TG)n Simple_repeat Simple_repeat 2 30 0 372 181 8 126 chr5 21220487 21220574 -178409576 - L1M4 LINE L1 -1587 4559 4490 1888 143 25 3 chr5 21220574 21220860 -178409290 + AluSx SINE Alu 1 292 -20 372 181 8 126 chr5 21220860 21220899 -178409251 - L1M4 LINE L1 -1656 4490 4448 273 172 0 0 chr5 21221840 21221904 -178408246 + T-rich Low_complexity Low_complexity 1 64 0 696 218 0 0 chr5 21221906 21222039 -178408111 - FLAM_C SINE Alu 0 133 1 204 177 16 48 chr5 21222347 21222409 -178407741 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 2456 141 32 2 chr5 21222409 21222842 -178407308 - L1PB1 LINE L1 -8 6143 5698 1216 206 14 31 chr5 21222849 21223020 -178407130 + L1 LINE L1 3179 3342 -2804 4671 94 23 6 chr5 21223020 21223669 -178406481 - PABL_A LTR ERV1 0 660 1 1216 206 14 31 chr5 21223669 21223846 -178406304 + L1 LINE L1 3342 3521 -2625 455 245 83 52 chr5 21223893 21224162 -178405988 - LTR56 LTR ERV1 0 445 191 492 143 0 120 chr5 21224174 21224307 -178405843 + LOR1-int LTR ERV1 4360 4476 -3644 * 604 234 27 11 chr5 21224295 21224483 -178405667 - MER83B-int LTR ERV1 -1522 3358 3168 207 0 0 0 chr5 21224605 21224628 -178405522 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 876 10 0 0 chr5 21224815 21224915 -178405235 + L1PA4 LINE L1 5798 5897 -258 278 248 85 35 chr5 21224916 21225057 -178405093 + LTR36 LTR ERV1 48 195 -416 * 564 290 108 19 chr5 21225027 21225404 -178404746 + LTR38 LTR ERV1 141 602 -9 221 258 0 0 chr5 21225731 21225793 -178404357 + T-rich Low_complexity Low_complexity 1 62 0 1372 117 40 22 chr5 21225851 21225966 -178404184 + AluSg/x SINE Alu 86 197 -115 5285 90 41 9 chr5 21225966 21226722 -178403428 - LTR17 LTR ERV1 0 780 1 1372 117 40 22 chr5 21226722 21226829 -178403321 + AluSg/x SINE Alu 197 312 0 268 324 0 0 chr5 21226909 21226980 -178403170 - LTR16A LTR ERVL 0 450 380 2907 261 39 23 chr5 21226981 21227771 -178402379 + MER21B LTR ERV1 1 803 -60 2912 63 0 0 chr5 21228071 21228436 -178401714 + L1PA7 LINE L1 5776 6140 -14 1617 163 142 23 chr5 21228552 21228896 -178401254 - MSTA LTR MaLR -1 427 43 2951 154 57 45 chr5 21228896 21229498 -178400652 + MER4B LTR ERV1 1 609 -1 2987 129 143 29 chr5 21229503 21230064 -178400086 + MER4B-int LTR ERV1 1 641 -5957 204 40 0 0 chr5 21230064 21230089 -178400061 + (TG)n Simple_repeat Simple_repeat 2 26 0 2987 129 143 29 chr5 21230089 21230148 -178400002 + MER4B-int LTR ERV1 641 692 -5906 250 320 65 39 chr5 21230199 21230352 -178399798 + MER4B-int LTR ERV1 420 576 -6182 332 177 0 0 chr5 21230474 21230536 -178399614 + MER4B-int LTR ERV1 751 812 -5786 257 169 0 130 chr5 21230552 21230629 -178399521 + MER4B-int LTR ERV1 687 753 -5845 256 156 0 44 chr5 21230629 21230674 -178399476 + LTR49 LTR ERV1 271 313 -282 1380 106 59 51 chr5 21230694 21230967 -178399183 + MER4B-int LTR ERV1 993 1267 -5331 5009 196 82 52 chr5 21230984 21233269 -178396881 + MER4B-int LTR ERV1 1804 3586 -3012 2901 162 42 4 chr5 21233264 21233387 -178396763 + MER4B-int LTR ERV1 3423 3540 -3218 * 306 0 0 0 chr5 21233387 21233421 -178396729 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2901 162 42 4 chr5 21233421 21233884 -178396266 + MER4B-int LTR ERV1 3540 4088 -2670 * 9412 151 71 14 chr5 21233883 21235815 -178394335 + MER4B-int LTR ERV1 4452 6531 -227 6491 92 24 3 chr5 21235816 21238943 -178391207 - L1PA7 LINE L1 -6 6463 3263 4636 111 3 44 chr5 21238940 21239663 -178390487 - L1PA7 LINE L1 -5768 693 1 * 1541 145 4 8 chr5 21239664 21239906 -178390244 + MER4B-int LTR ERV1 6518 6758 0 3013 138 58 48 chr5 21239908 21240510 -178389640 + MER4B LTR ERV1 3 610 0 380 43 0 0 chr5 21240510 21240556 -178389594 - MSTA LTR MaLR -382 46 1 239 299 134 8 chr5 21241015 21241142 -178389008 + MIR SINE MIR 50 192 -70 258 281 85 0 chr5 21241390 21241472 -178388678 + MER117 DNA MER1_type 108 196 -1 262 292 108 31 chr5 21241604 21241734 -178388416 - MIR SINE MIR -49 213 74 596 309 40 28 chr5 21242287 21242539 -178387611 - MIR SINE MIR -6 256 2 256 298 0 53 chr5 21242541 21242635 -178387515 + MIR SINE MIR 164 252 -10 1808 162 53 48 chr5 21243473 21243649 -178386501 - L1PA16 LINE L1 -10 6156 5982 1256 207 88 14 chr5 21243649 21243934 -178386216 - AluJo SINE Alu -6 306 1 1808 162 53 48 chr5 21243934 21244133 -178386017 - L1PA16 LINE L1 -184 5982 5779 1928 149 30 0 chr5 21244459 21244760 -178385390 + AluSq SINE Alu 3 312 -1 560 299 134 0 chr5 21245014 21245238 -178384912 - LTR16C LTR ERVL -2 489 236 226 285 65 32 chr5 21245982 21246105 -178384045 - MER65B LTR ERV1 -403 128 2 25 0 0 0 chr5 21247010 21247035 -178383115 + AT_rich Low_complexity Low_complexity 1 25 0 274 319 57 25 chr5 21247332 21247489 -178382661 - MIR SINE MIR -29 233 72 944 267 73 25 chr5 21247725 21248095 -178382055 - MLT1D LTR MaLR 0 505 120 1927 119 92 9 chr5 21249963 21250291 -178379859 - THE1A LTR MaLR 0 355 1 485 255 141 47 chr5 21250816 21251114 -178379036 + L1MC4 LINE L1 6512 6837 -1205 1289 249 126 9 chr5 21251130 21251669 -178378481 + L1MC4 LINE L1 7066 7667 -375 472 266 66 80 chr5 21252259 21252609 -178377541 - L1MDa LINE L1 -3988 2552 2208 2100 248 29 29 chr5 21252689 21253282 -178376868 - MLT1E LTR MaLR 0 593 1 257 208 69 0 chr5 21253544 21253616 -178376534 + LTR67 LTR ERVL 481 557 0 1650 254 37 44 chr5 21253654 21254358 -178375792 - L1M4 LINE L1 -1979 4665 3967 741 188 0 16 chr5 21254365 21254512 -178375638 - MLT1A1 LTR MaLR -2 388 229 323 179 107 24 chr5 21254538 21254622 -178375528 - MLT1A1 LTR MaLR -337 91 1 2846 273 69 15 chr5 21254643 21256003 -178374147 - L1M4 LINE L1 -2688 3956 2561 403 304 39 88 chr5 21256089 21256477 -178373673 - L1M4 LINE L1 -4313 2512 2144 1862 228 32 94 chr5 21256647 21257441 -178372709 - L1M4 LINE L1 -4592 2054 1354 1374 217 4 7 chr5 21257441 21257722 -178372428 + AluJo SINE Alu 3 282 -30 1862 228 32 94 chr5 21257722 21258013 -178372137 - L1M4 LINE L1 -5292 1354 1046 213 178 0 0 chr5 21258027 21258072 -178372078 + (CA)n Simple_repeat Simple_repeat 2 46 0 2262 256 89 19 chr5 21258235 21258387 -178371763 + L1M4 LINE L1 2399 2539 -3607 2290 113 0 0 chr5 21258387 21258696 -178371454 - AluSq SINE Alu -4 309 1 2262 256 89 19 chr5 21258696 21259604 -178370546 + L1M4 LINE L1 2539 3533 -2613 690 265 98 38 chr5 21259722 21260069 -178370081 + L1ME3A LINE L1 5803 6170 0 24 32 0 0 chr5 21261603 21261634 -178368516 + AT_rich Low_complexity Low_complexity 1 31 0 492 225 0 0 chr5 21262013 21262142 -178368008 + CT-rich Low_complexity Low_complexity 3 131 0 977 141 0 6 chr5 21262142 21262312 -178367838 + (TTTC)n Simple_repeat Simple_repeat 1 169 0 2790 13 0 0 chr5 21262732 21263043 -178367107 - AluYa5 SINE Alu 0 311 1 22 0 0 0 chr5 21263044 21263066 -178367084 + AT_rich Low_complexity Low_complexity 1 22 0 215 235 29 20 chr5 21263898 21264000 -178366150 + (TTA)n Simple_repeat Simple_repeat 1 103 0 24 67 0 0 chr5 21264012 21264057 -178366093 + AT_rich Low_complexity Low_complexity 1 45 0 272 241 111 19 chr5 21264434 21264542 -178365608 + L1MC5 LINE L1 7270 7387 -574 467 272 122 38 chr5 21264731 21265093 -178365057 + L1MC4 LINE L1 7555 8041 -1 21 0 0 0 chr5 21265784 21265805 -178364345 + AT_rich Low_complexity Low_complexity 1 21 0 33 80 0 0 chr5 21266891 21266966 -178363184 + AT_rich Low_complexity Low_complexity 1 75 0 239 331 120 42 chr5 21267033 21267175 -178362975 - MIR3 SINE MIR -35 173 21 1935 108 14 4 chr5 21267800 21268079 -178362071 + AluSx SINE Alu 11 292 -20 916 305 124 25 chr5 21268281 21268766 -178361384 + MLT1H1 LTR MaLR 20 552 -3 732 35 0 0 chr5 21269105 21269192 -178360958 - L1PA2 LINE L1 -379 5776 5690 3240 26 0 0 chr5 21269192 21269616 -178360534 + L1PA2 LINE L1 5762 6204 0 1804 127 3 3 chr5 21269995 21270278 -178359872 - L1P4 LINE L1 -569 5594 5312 392 125 78 0 chr5 21270303 21270431 -178359719 + (TA)n Simple_repeat Simple_repeat 1 138 0 2134 138 37 11 chr5 21270438 21270793 -178359357 - THE1B LTR MaLR 0 364 1 2455 119 0 11 chr5 21270793 21271171 -178358979 + L1PA13 LINE L1 5788 6161 -2 205 302 209 0 chr5 21271246 21271332 -178358818 + MIR SINE MIR 38 141 -121 240 143 0 0 chr5 21271339 21271381 -178358769 + (TG)n Simple_repeat Simple_repeat 1 42 0 242 306 28 0 chr5 21271404 21271476 -178358674 + MIR SINE MIR 188 261 -1 425 257 0 0 chr5 21271997 21272102 -178358048 - L1MA10 LINE L1 -1 6333 6229 5310 165 19 4 chr5 21272226 21273340 -178356810 + L1PA16 LINE L1 5034 6165 -1 653 291 37 3 chr5 21273348 21273674 -178356476 - L1MCa LINE L1 -2808 4149 3813 2004 146 36 30 chr5 21273759 21274121 -178356029 - THE1B LTR MaLR 0 364 1 11209 98 10 0 chr5 21274121 21275685 -178354465 - THE1B-int LTR MaLR 0 1580 1 1643 162 65 31 chr5 21275685 21276037 -178354113 - THE1B LTR MaLR 0 364 1 1929 211 44 0 chr5 21276052 21276465 -178353685 + MSTB1 LTR MaLR 2 432 0 1749 280 98 17 chr5 21276540 21277242 -178352908 - L1M4 LINE L1 -6022 837 7 2198 231 155 30 chr5 21277249 21277643 -178352507 - L1MCa LINE L1 -3985 2972 2629 1218 121 16 0 chr5 21277643 21277825 -178352325 + L1PA10 LINE L1 5973 6157 -11 2198 231 155 30 chr5 21277825 21278093 -178352057 - L1MCa LINE L1 -4328 2629 2396 2420 56 3 3 chr5 21278093 21278396 -178351754 - AluY SINE Alu -8 303 1 2198 231 155 30 chr5 21278396 21278924 -178351226 - L1MCa LINE L1 -4561 2396 1632 1487 195 48 7 chr5 21279065 21279357 -178350793 + AluJo SINE Alu 2 305 -7 1008 347 53 34 chr5 21279800 21280368 -178349782 + HERV16 LTR ERVL 1778 2356 -2640 358 164 0 0 chr5 21280721 21280776 -178349374 - AluSg/x SINE Alu -38 262 208 731 280 56 47 chr5 21281257 21281596 -178348554 + LTR16A1 LTR ERVL 56 397 -60 565 156 0 0 chr5 21281897 21281987 -178348163 - AluSx SINE Alu -13 296 207 905 139 0 0 chr5 21281987 21282116 -178348034 - AluSx SINE Alu -184 129 1 22 0 0 0 chr5 21282184 21282206 -178347944 + AT_rich Low_complexity Low_complexity 1 22 0 327 213 0 0 chr5 21282958 21283033 -178347117 + CT-rich Low_complexity Low_complexity 3 77 0 2068 126 0 13 chr5 21283038 21283355 -178346795 - AluSq SINE Alu 0 313 1 1665 225 49 33 chr5 21283697 21284186 -178345964 + MLT1D LTR MaLR 5 501 -4 1692 150 21 67 chr5 21285809 21286136 -178344014 - AluJb SINE Alu 0 312 1 1559 158 1 110 chr5 21286495 21286921 -178343229 + L1MA9 LINE L1 5203 5586 -726 434 169 56 0 chr5 21286958 21287055 -178343095 + L1MA9 LINE L1 6176 6292 -9 1043 103 0 0 chr5 21287135 21287281 -178342869 - AluSg/x SINE Alu -2 310 165 1037 218 30 106 chr5 21287287 21287682 -178342468 - MLT1A1 LTR MaLR 0 365 1 1482 222 15 3 chr5 21287755 21288089 -178342061 - L1M4 LINE L1 -444 6238 5901 1669 249 33 22 chr5 21288243 21288883 -178341267 - L1M4 LINE L1 -4432 2393 1604 4154 262 33 39 chr5 21288893 21290288 -178339862 - L1M4 LINE L1 -4988 1554 166 1875 160 10 0 chr5 21290288 21290595 -178339555 - AluSx SINE Alu -2 310 1 4154 262 33 39 chr5 21290595 21290648 -178339502 - L1M4 LINE L1 -6376 166 114 374 369 29 35 chr5 21290768 21291115 -178339035 - ERVL LTR ERVL -1722 3932 3588 532 294 184 21 chr5 21291495 21291777 -178338373 - MLT1G1 LTR MaLR 0 595 268 280 393 34 15 chr5 21291849 21292114 -178338036 - ERVL LTR ERVL -4116 1648 1379 2286 97 7 0 chr5 21292337 21292635 -178337515 - AluSc SINE Alu -9 300 1 853 160 0 0 chr5 21292811 21292955 -178337195 - Tigger2 DNA MER2_type -107 2611 2468 261 128 0 0 chr5 21293086 21293133 -178337017 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 1306 273 73 58 chr5 21293812 21294981 -178335169 - L1ME1 LINE L1 -5 6161 4950 2040 135 0 3 chr5 21294981 21295277 -178334873 + AluSg SINE Alu 1 295 -15 1306 273 73 58 chr5 21295277 21295618 -178334532 - L1ME1 LINE L1 -1216 4950 4616 1313 252 89 21 chr5 21295650 21296078 -178334072 - MLT1C LTR MaLR -2 465 9 1641 244 45 62 chr5 21296085 21296635 -178333515 - MER77 LTR ERV1 -9 596 56 230 200 31 0 chr5 21296662 21296727 -178333423 - L1ME1 LINE L1 -1542 4604 4538 1033 153 61 57 chr5 21296739 21296911 -178333239 + L1MA9 LINE L1 6084 6259 -53 3505 216 30 49 chr5 21296911 21297787 -178332363 + MER21B LTR ERV1 1 859 -4 1033 153 61 57 chr5 21297787 21297842 -178332308 + L1MA9 LINE L1 6259 6312 0 334 214 162 26 chr5 21297913 21298067 -178332083 - L1ME1 LINE L1 -1595 4551 4377 4512 148 72 12 chr5 21298068 21298943 -178331207 + Tigger3b DNA MER2_type 1 927 -304 2227 165 26 29 chr5 21298943 21299361 -178330789 + MSTB LTR MaLR 1 417 -9 932 153 11 42 chr5 21299363 21299552 -178330598 + Tigger3b DNA MER2_type 917 1099 -132 2707 68 8 0 chr5 21299645 21299997 -178330153 + THE1A LTR MaLR 1 355 0 649 183 50 0 chr5 21299997 21300117 -178330033 + Tigger3b DNA MER2_type 1105 1230 -1 252 108 0 0 chr5 21300123 21300160 -178329990 - Tigger3b DNA MER2_type -67 1164 1128 375 339 37 37 chr5 21300296 21300485 -178329665 + MER5A DNA MER1_type 1 189 0 25 0 0 0 chr5 21300731 21300756 -178329394 + AT_rich Low_complexity Low_complexity 1 25 0 225 178 0 0 chr5 21302374 21302419 -178327731 + (TA)n Simple_repeat Simple_repeat 1 45 0 2277 151 8 16 chr5 21303180 21303558 -178326592 - THE1C LTR MaLR 0 375 1 201 209 0 0 chr5 21305113 21305156 -178324994 - L2 LINE L2 -8 3305 3263 215 380 43 11 chr5 21305773 21305865 -178324285 + MIR SINE MIR 2 96 -166 4832 113 10 10 chr5 21306269 21306996 -178323154 - L1PA10 LINE L1 -18 6150 5424 6939 112 7 16 chr5 21307096 21307162 -178322988 - L1PA10 LINE L1 -759 5387 5322 2210 101 7 0 chr5 21307162 21307449 -178322701 - AluSx SINE Alu -17 295 7 6939 112 7 16 chr5 21307449 21308475 -178321675 - L1PA10 LINE L1 -824 5322 4305 29 47 0 0 chr5 21309450 21309493 -178320657 + AT_rich Low_complexity Low_complexity 1 43 0 246 269 103 0 chr5 21309636 21309714 -178320436 - MIR SINE MIR -58 204 119 201 343 57 0 chr5 21310055 21310125 -178320025 - MER5B DNA MER1_type -104 74 1 2226 116 0 0 chr5 21310443 21310745 -178319405 - AluSg1 SINE Alu -7 302 1 1299 238 134 47 chr5 21311949 21312457 -178317693 - MLT1E3 LTR MaLR -1 623 72 301 316 38 30 chr5 21313516 21313649 -178316501 - L1MB7 LINE L1 -15 6169 6036 2526 231 26 10 chr5 21313723 21314419 -178315731 - L1ME1 LINE L1 -222 5944 5304 762 157 101 6 chr5 21314425 21314584 -178315566 + MLT1D LTR MaLR 140 313 -192 322 320 81 6 chr5 21314602 21314774 -178315376 + MER5A DNA MER1_type 4 188 -1 360 337 87 17 chr5 21315182 21315354 -178314796 + MER5A DNA MER1_type 6 189 0 531 335 58 29 chr5 21316341 21316616 -178313534 - MLT1J LTR MaLR -224 287 5 1012 98 0 0 chr5 21317422 21317554 -178312596 - AluY SINE Alu -179 132 1 22 56 0 0 chr5 21317671 21317707 -178312443 + AT_rich Low_complexity Low_complexity 1 36 0 382 224 82 34 chr5 21318567 21318714 -178311436 + L2 LINE L2 732 885 -2429 269 188 0 31 chr5 21319190 21319254 -178310896 - L1MB8 LINE L1 -9 6169 6108 2554 59 0 3 chr5 21319710 21320017 -178310133 + AluY SINE Alu 1 306 -5 264 115 213 16 chr5 21320087 21320148 -178310002 - MER70A LTR ERVL 0 472 400 1997 247 36 0 chr5 21320153 21320574 -178309576 - MER70A LTR ERVL -36 436 1 7183 158 20 3 chr5 21320596 21321807 -178308343 + Tigger1 DNA MER2_type 1 1231 -1187 417 226 57 0 chr5 21321909 21322015 -178308135 - MIR SINE MIR -120 142 31 2629 51 0 3 chr5 21323060 21323372 -178306778 - AluY SINE Alu 0 311 1 9271 69 5 15 chr5 21323998 21324814 -178305336 - L1PA3 LINE L1 0 6155 5333 2210 101 7 0 chr5 21324814 21325101 -178305049 - AluSx SINE Alu -17 295 7 9271 69 5 15 chr5 21325101 21326309 -178303841 - L1P1 LINE L1 -822 5333 4126 1981 21 0 0 chr5 21326309 21326543 -178303607 + L1P1 LINE L1 5350 5583 -572 257 242 0 0 chr5 21326719 21326785 -178303365 + (TA)n Simple_repeat Simple_repeat 2 67 0 6158 160 25 0 chr5 21326789 21327856 -178302294 + Tigger1 DNA MER2_type 1325 2418 0 21 0 0 0 chr5 21328355 21328376 -178301774 + AT_rich Low_complexity Low_complexity 1 21 0 475 222 81 45 chr5 21329468 21329666 -178300484 + MER3 DNA MER1_type 5 209 0 763 268 68 19 chr5 21329809 21330074 -178300076 + LTR16C LTR ERVL 143 420 -71 279 262 131 0 chr5 21330123 21330207 -178299943 + MER3 DNA MER1_type 1 95 -114 191 348 22 22 chr5 21330356 21330448 -178299702 + L2 LINE L2 3181 3272 0 1128 139 19 48 chr5 21330897 21331106 -178299044 - THE1C LTR MaLR 0 375 173 8446 138 22 43 chr5 21331111 21331713 -178298437 - THE1C-int LTR MaLR -121 1459 845 2339 76 7 7 chr5 21331713 21332015 -178298135 - AluY SINE Alu -9 302 1 8446 138 22 43 chr5 21332015 21332844 -178297306 - THE1C-int LTR MaLR -735 845 59 2016 143 62 11 chr5 21332881 21333238 -178296912 - THE1C LTR MaLR 0 375 1 24 67 0 0 chr5 21333292 21333337 -178296813 + AT_rich Low_complexity Low_complexity 1 45 0 300 306 61 66 chr5 21333365 21333561 -178296589 - LTR33 LTR ERVL -23 498 304 789 163 75 0 chr5 21334027 21334174 -178295976 + AluSg/x SINE Alu 139 296 -13 1987 106 67 0 chr5 21334285 21334568 -178295582 + AluSg1 SINE Alu 1 302 -7 1886 88 0 0 chr5 21336075 21336315 -178293835 - AluSq SINE Alu 0 313 74 718 233 0 28 chr5 21439088 21439268 -178190882 - FRAM SINE Alu -1 175 1 2227 64 4 0 chr5 21439301 21439616 -178190534 + AluY SINE Alu 1 316 0 231 200 0 0 chr5 21441130 21441175 -178188975 + GA-rich Low_complexity Low_complexity 1 45 0 226 288 75 12 chr5 21441832 21441912 -178188238 + L2 LINE L2 3188 3272 0 372 289 7 27 chr5 21442966 21443115 -178187035 + MER113 DNA MER1_type? 225 370 -151 235 149 21 0 chr5 21443163 21443210 -178186940 - LTR66 LTR ERVL -171 439 392 200 184 0 0 chr5 21443210 21443248 -178186902 + CT-rich Low_complexity Low_complexity 1 38 0 337 270 214 8 chr5 21443260 21443386 -178186764 + MER5A DNA MER1_type 9 160 -29 354 213 0 43 chr5 21443401 21443495 -178186655 + MER113 DNA MER1_type? 358 447 -74 655 229 77 11 chr5 21443507 21443690 -178186460 + MER3 DNA MER1_type 10 204 -5 721 307 81 81 chr5 21443936 21444603 -178185547 + HAL1 LINE L1 25 691 -1816 769 289 140 65 chr5 21444618 21445366 -178184784 + HAL1 LINE L1 1080 1924 -583 1550 179 13 47 chr5 21445366 21445684 -178184466 + AluJo SINE Alu 6 312 0 769 289 140 65 chr5 21445684 21445943 -178184207 + HAL1 LINE L1 1924 2162 -345 276 287 89 20 chr5 21446235 21446336 -178183814 - L2 LINE L2 -13 3300 3193 438 329 109 40 chr5 21446488 21446865 -178183285 + L2 LINE L2 2910 3312 -1 21 36 0 0 chr5 21446973 21447001 -178183149 + AT_rich Low_complexity Low_complexity 1 28 0 738 152 0 35 chr5 21447701 21447846 -178182304 - FLAM_C SINE Alu -1 142 3 287 286 134 0 chr5 21448725 21448844 -178181306 + MIR SINE MIR 108 242 -20 226 304 64 56 chr5 21449483 21449608 -178180542 - MLT1H LTR MaLR -387 162 37 21 0 0 0 chr5 21449788 21449809 -178180341 + AT_rich Low_complexity Low_complexity 1 21 0 759 305 65 21 chr5 21451054 21451392 -178178758 - MLT1K LTR MaLR 0 588 236 234 244 233 0 chr5 21453501 21453591 -178176559 + MER5B DNA MER1_type 1 111 -67 1600 135 42 45 chr5 21453591 21453712 -178176438 - MER39B LTR ERV1 -366 287 167 1938 163 0 0 chr5 21453712 21454012 -178176138 - AluSx SINE Alu -10 302 3 1600 135 42 45 chr5 21454012 21454178 -178175972 - MER39B LTR ERV1 -486 167 1 32 75 0 0 chr5 21454436 21454503 -178175647 + AT_rich Low_complexity Low_complexity 1 67 0 1455 192 10 30 chr5 21454558 21454855 -178175295 - AluJb SINE Alu -21 291 1 251 154 0 19 chr5 21455328 21455380 -178174770 + (CATA)n Simple_repeat Simple_repeat 3 53 0 1770 178 51 3 chr5 21455402 21455734 -178174416 - MLT2C1 LTR ERVL -49 348 1 387 0 0 0 chr5 21456694 21456737 -178173413 + (TG)n Simple_repeat Simple_repeat 2 44 0 358 264 160 0 chr5 21458114 21458258 -178171892 - MER5B DNA MER1_type 0 178 12 835 236 72 10 chr5 21458639 21458932 -178171218 + LTR37A LTR ERV1 112 422 -4 2083 123 35 30 chr5 21459277 21459650 -178170500 - THE1C LTR MaLR 0 375 1 21 57 0 0 chr5 21460177 21460212 -178169938 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 21460620 21460641 -178169509 + AT_rich Low_complexity Low_complexity 1 21 0 307 221 59 73 chr5 21461003 21461139 -178169011 - L2 LINE L2 0 3313 3180 1989 78 25 3 chr5 21461260 21461593 -178168557 + L1PA7 LINE L1 5848 6186 0 225 169 0 0 chr5 21463835 21463894 -178166256 + (TA)n Simple_repeat Simple_repeat 2 60 0 297 383 17 0 chr5 21464096 21464216 -178165934 - L3 LINE CR1 -4 1573 1452 1908 111 44 0 chr5 21465154 21465464 -178164686 + AluSq SINE Alu 1 322 0 212 210 0 32 chr5 21465920 21465982 -178164168 + A-rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr5 21466448 21466470 -178163680 + AT_rich Low_complexity Low_complexity 1 22 0 1877 293 161 56 chr5 21467571 21468205 -178161945 - L2 LINE L2 -1680 1634 1068 1864 139 10 26 chr5 21468205 21468515 -178161635 + AluSx SINE Alu 1 305 -7 1877 293 161 56 chr5 21468515 21468690 -178161460 - L2 LINE L2 -2246 1068 913 2214 90 0 10 chr5 21468690 21468991 -178161159 + AluY SINE Alu 1 298 -13 1877 293 161 56 chr5 21468991 21469489 -178160661 - L2 LINE L2 -2401 913 188 2872 101 10 2 chr5 21470043 21470438 -178159712 - MER1A DNA MER1_type 0 529 132 1748 137 7 11 chr5 21470442 21470720 -178159430 - AluJb SINE Alu -34 278 2 222 284 84 0 chr5 21471423 21471518 -178158632 + MIR SINE MIR 160 262 0 218 344 21 21 chr5 21471532 21471628 -178158522 + MIR3 SINE MIR 60 155 -53 198 0 0 0 chr5 21473488 21473510 -178156640 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 271 137 0 4 chr5 21473521 21473727 -178156423 + AluSc SINE Alu 1 291 -8 23 0 0 0 chr5 21474096 21474119 -178156031 + AT_rich Low_complexity Low_complexity 1 23 0 285 51 0 0 chr5 21475008 21475047 -178155103 + (CA)n Simple_repeat Simple_repeat 2 40 0 1154 128 37 11 chr5 21475053 21475241 -178154909 + MSTA LTR MaLR 6 198 -230 250 323 65 0 chr5 21475293 21475417 -178154733 + L1MC/D LINE L1 5742 5873 -1935 208 281 0 0 chr5 21475514 21475571 -178154579 + (TG)n Simple_repeat Simple_repeat 2 58 0 214 237 0 0 chr5 21475641 21475679 -178154471 + polypyrimidine Low_complexity Low_complexity 5 42 0 2262 88 0 0 chr5 21475683 21475988 -178154162 - AluY SINE Alu -6 305 1 185 156 0 22 chr5 21476005 21476050 -178154100 + CT-rich Low_complexity Low_complexity 2 45 0 27 62 0 0 chr5 21476168 21476216 -178153934 + AT_rich Low_complexity Low_complexity 1 48 0 5273 117 25 5 chr5 21476361 21477197 -178152953 - L1MA3 LINE L1 0 6305 5453 252 370 19 9 chr5 21477315 21477423 -178152727 - L2 LINE L2 -6 3307 3199 1584 169 41 41 chr5 21477568 21477930 -178152220 + THE1B LTR MaLR 1 362 -2 1379 228 206 21 chr5 21478539 21479118 -178151032 + MER76 LTR ERV 1 686 -2 242 357 101 34 chr5 21479199 21479437 -178150713 - L2 LINE L2 -31 3282 3029 374 43 58 0 chr5 21479583 21479652 -178150498 + (TA)n Simple_repeat Simple_repeat 1 73 0 288 320 34 7 chr5 21479863 21480010 -178150140 + L1ME LINE L1 5669 5819 -302 22 35 0 0 chr5 21480119 21480148 -178150002 + AT_rich Low_complexity Low_complexity 1 29 0 1712 158 61 0 chr5 21480841 21480961 -178149189 + AluSx SINE Alu 1 112 -200 183 42 0 0 chr5 21480961 21480985 -178149165 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1712 158 61 0 chr5 21480985 21481143 -178149007 + AluSx SINE Alu 112 296 -16 252 130 0 0 chr5 21481716 21481762 -178148388 + (TC)n Simple_repeat Simple_repeat 1 46 0 1035 222 46 24 chr5 21482797 21483236 -178146914 + MLT1D LTR MaLR 1 505 0 369 0 0 0 chr5 21483250 21483291 -178146859 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 95 0 0 chr5 21483363 21483426 -178146724 + AT_rich Low_complexity Low_complexity 1 63 0 186 275 0 0 chr5 21483482 21483562 -178146588 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 1988 128 52 30 chr5 21483785 21484152 -178145998 + THE1C LTR MaLR 1 375 0 457 256 16 8 chr5 21484679 21484800 -178145350 - MER45A DNA AcHobo 0 178 57 236 277 0 60 chr5 21484956 21485039 -178145111 - MIR3 SINE MIR -17 191 114 23 0 0 0 chr5 21485428 21485451 -178144699 + AT_rich Low_complexity Low_complexity 1 23 0 2659 256 81 34 chr5 21485914 21486043 -178144107 + L1MDa LINE L1 1023 1145 -5395 2184 122 6 3 chr5 21486043 21486354 -178143796 + AluSx SINE Alu 1 312 0 2659 256 81 34 chr5 21486354 21487503 -178142647 + L1MDa LINE L1 1145 2360 -4180 1228 189 31 22 chr5 21487520 21487747 -178142403 + Tigger3b DNA MER2_type 1 229 -1002 1963 156 30 24 chr5 21487747 21488118 -178142032 + THE1C LTR MaLR 1 373 -2 6743 141 33 19 chr5 21488120 21489619 -178140531 + THE1C-int LTR MaLR 1 1580 0 2069 166 11 21 chr5 21489619 21489998 -178140152 + THE1C LTR MaLR 1 375 0 4874 165 41 17 chr5 21489998 21490115 -178140035 + Tigger3b DNA MER2_type 225 338 -2690 2125 58 0 0 chr5 21490115 21490372 -178139778 + AluY SINE Alu 47 303 -8 4874 165 41 17 chr5 21490372 21491232 -178138918 + Tigger3b DNA MER2_type 338 1225 -6 748 202 60 5 chr5 21491236 21491454 -178138696 + L1MDa LINE L1 2377 2606 -3934 23 0 0 0 chr5 21491511 21491534 -178138616 + AT_rich Low_complexity Low_complexity 1 23 0 2156 91 0 7 chr5 21491653 21491987 -178138163 - AluY SINE Alu 0 332 1 189 0 0 0 chr5 21492145 21492166 -178137984 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1493 118 93 89 chr5 21492168 21492448 -178137702 - AluSx SINE Alu -31 281 1 259 311 104 15 chr5 21492890 21493025 -178137125 + MIR SINE MIR 13 159 -103 2681 204 72 54 chr5 21493634 21494394 -178135756 + MER4E LTR ERV1 1 774 -5 249 323 120 15 chr5 21496017 21496150 -178134000 - MIR SINE MIR -56 206 60 22 88 0 0 chr5 21496173 21496230 -178133920 + AT_rich Low_complexity Low_complexity 1 57 0 548 323 72 43 chr5 21496790 21497208 -178132942 + L1MEd LINE L1 668 1097 -5022 28 0 0 0 chr5 21497612 21497640 -178132510 + AT_rich Low_complexity Low_complexity 1 28 0 6357 174 11 14 chr5 21497813 21498831 -178131319 - L1PA14 LINE L1 0 6161 5141 2078 120 38 27 chr5 21498831 21499199 -178130951 + THE1C LTR MaLR 1 372 -3 6357 174 11 14 chr5 21499199 21500257 -178129893 - L1PA14 LINE L1 -1020 5141 4088 2983 187 20 16 chr5 21500257 21500528 -178129622 + L1P LINE L1 2121 2390 -3756 2190 88 0 57 chr5 21500528 21500846 -178129304 + AluSc SINE Alu 1 300 -9 2983 187 20 16 chr5 21500846 21501184 -178128966 + L1P LINE L1 2390 2732 -3414 243 88 0 0 chr5 21501601 21501635 -178128515 + (CA)n Simple_repeat Simple_repeat 2 35 0 316 297 42 0 chr5 21501692 21501810 -178128340 - L1ME2 LINE L1 -16 6148 6026 928 260 35 22 chr5 21501816 21502182 -178127968 - L1MEc LINE L1 -3373 3009 2639 353 278 52 48 chr5 21502211 21502374 -178127776 - L1MEc LINE L1 -3959 2604 2438 1474 202 33 50 chr5 21502374 21502770 -178127380 + MLT1B LTR MaLR 2 390 0 353 278 52 48 chr5 21502770 21502854 -178127296 - L1MEc LINE L1 -4125 2438 2356 292 333 62 24 chr5 21502999 21503368 -178126782 - L1MEc LINE L1 -4899 1381 999 339 309 13 34 chr5 21503393 21503542 -178126608 - L1MEc LINE L1 -5477 1086 941 344 39 0 20 chr5 21503994 21504045 -178126105 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 688 225 0 12 chr5 21504047 21504207 -178125943 - L1PA16 LINE L1 -10 6156 5999 427 154 26 0 chr5 21504212 21504290 -178125860 + L1P LINE L1 5141 5220 -926 29 0 0 0 chr5 21505465 21505494 -178124656 + AT_rich Low_complexity Low_complexity 1 29 0 186 171 0 0 chr5 21507040 21507081 -178123069 + T-rich Low_complexity Low_complexity 1 41 0 877 219 128 0 chr5 21507187 21507383 -178122767 - MER58A DNA MER1_type -3 221 1 374 278 46 9 chr5 21507390 21507498 -178122652 + L2 LINE L2 3188 3299 -14 338 346 81 11 chr5 21509128 21509313 -178120837 - MIR SINE MIR -13 249 52 431 319 78 71 chr5 21509415 21509648 -178120502 + MLT1F-int LTR MaLR 961 1200 -171 2777 103 2 7 chr5 21509648 21510056 -178120094 + L1PA10 LINE L1 5763 6168 0 431 319 78 71 chr5 21510056 21510230 -178119920 + MLT1F-int LTR MaLR 1200 1371 0 548 237 135 70 chr5 21510231 21510592 -178119558 + MLT1F LTR MaLR 2 443 -99 1417 277 36 11 chr5 21510667 21511137 -178119013 + L1MC4 LINE L1 7350 7831 -211 2112 151 0 0 chr5 21511458 21511770 -178118380 + AluSx SINE Alu 1 312 0 21 0 0 0 chr5 21513798 21513819 -178116331 + AT_rich Low_complexity Low_complexity 1 21 0 1280 201 29 42 chr5 21513821 21514134 -178116016 + AluJo SINE Alu 1 309 -3 23 0 0 0 chr5 21515226 21515249 -178114901 + AT_rich Low_complexity Low_complexity 1 23 0 183 222 0 0 chr5 21516295 21516340 -178113810 + GA-rich Low_complexity Low_complexity 2 46 0 30 45 0 0 chr5 21517333 21517377 -178112773 + AT_rich Low_complexity Low_complexity 1 44 0 183 204 0 0 chr5 21517403 21517457 -178112693 + (TA)n Simple_repeat Simple_repeat 1 54 0 22 35 0 0 chr5 21517465 21517494 -178112656 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr5 21517748 21517773 -178112377 + AT_rich Low_complexity Low_complexity 1 25 0 2089 115 0 3 chr5 21519047 21519343 -178110807 - AluSq SINE Alu -18 295 1 259 286 0 17 chr5 21519371 21519490 -178110660 + (TA)n Simple_repeat Simple_repeat 2 118 0 221 250 19 0 chr5 21519630 21519682 -178110468 + (TG)n Simple_repeat Simple_repeat 2 54 0 2667 7 0 0 chr5 21520722 21521022 -178109128 - L1P1 LINE L1 -536 5619 5320 272 0 0 0 chr5 21521022 21521061 -178109089 + L1PA2 LINE L1 6116 6154 -1 209 135 0 27 chr5 21521062 21521099 -178109051 + (TA)n Simple_repeat Simple_repeat 2 37 0 1423 194 56 18 chr5 21522590 21522874 -178107276 - AluJb SINE Alu -7 295 1 1462 251 82 24 chr5 21522897 21523348 -178106802 + MLT2B1 LTR ERVL 3 479 -41 284 216 0 8 chr5 21523351 21523485 -178106665 + (TA)n Simple_repeat Simple_repeat 1 133 0 202 227 15 0 chr5 21523497 21523563 -178106587 + (TA)n Simple_repeat Simple_repeat 2 68 0 405 296 53 15 chr5 21523937 21524201 -178105949 - HAL1 LINE L1 -698 1809 1536 250 319 22 29 chr5 21524437 21524575 -178105575 - HAL1 LINE L1 -1120 1387 1251 226 348 65 36 chr5 21524927 21525065 -178105085 - HAL1 LINE L1 -1599 908 767 262 291 187 0 chr5 21525718 21525852 -178104298 - L1MC4 LINE L1 -91 7951 7793 21 0 0 0 chr5 21528040 21528061 -178102089 + AT_rich Low_complexity Low_complexity 1 21 0 2352 97 0 0 chr5 21529111 21529422 -178100728 + AluSx SINE Alu 2 312 0 255 286 0 0 chr5 21529990 21530053 -178100097 + GA-rich Low_complexity Low_complexity 3 65 0 368 357 19 13 chr5 21531236 21531393 -178098757 + MIR SINE MIR 17 174 -88 534 280 43 33 chr5 21531554 21531765 -178098385 - MIR SINE MIR -16 246 34 295 168 56 0 chr5 21532387 21532530 -178097620 + (TA)n Simple_repeat Simple_repeat 1 151 0 21 36 0 0 chr5 21532890 21532918 -178097232 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 21533447 21533470 -178096680 + AT_rich Low_complexity Low_complexity 1 23 0 1531 164 65 44 chr5 21533765 21534132 -178096018 - THE1C LTR MaLR 0 375 1 1408 253 91 32 chr5 21534351 21534814 -178095336 + MLT1E2 LTR MaLR 137 626 0 3171 89 269 0 chr5 21535650 21536192 -178093958 + LTR12 LTR ERV1 1 688 0 659 214 91 0 chr5 21586504 21586575 -178043575 - L1MA9 LINE L1 -73 6239 6176 192 77 0 0 chr5 21586575 21586601 -178043549 + (TG)n Simple_repeat Simple_repeat 1 26 0 659 214 91 0 chr5 21586601 21586716 -178043434 - L1MA9 LINE L1 -136 6176 6036 1361 115 19 0 chr5 21586945 21587180 -178042970 + L1PA7 LINE L1 5932 6170 0 2192 104 0 7 chr5 21587180 21587479 -178042671 + AluSx SINE Alu 1 297 -15 2299 136 24 56 chr5 21588121 21588426 -178041724 - LTR23 LTR ERV1 0 437 149 2183 110 3 3 chr5 21588426 21588727 -178041423 + AluSg SINE Alu 1 301 -9 2299 136 24 56 chr5 21588727 21588871 -178041279 - LTR23 LTR ERV1 -288 149 2 24 32 0 0 chr5 21588910 21588941 -178041209 + AT_rich Low_complexity Low_complexity 1 31 0 499 162 43 17 chr5 21589240 21589357 -178040793 + L1MD1 LINE L1 6108 6227 -15 229 257 27 0 chr5 21589443 21589517 -178040633 + (TTTA)n Simple_repeat Simple_repeat 2 77 0 207 295 137 42 chr5 21589719 21589814 -178040336 - L2 LINE L2 0 3272 3169 366 245 107 71 chr5 21589970 21590166 -178039984 - MER20 DNA MER1_type -16 203 1 382 242 29 117 chr5 21590373 21590458 -178039692 - L2 LINE L2 -523 2791 2700 517 266 9 0 chr5 21590458 21590571 -178039579 - MER81 DNA DNA 0 114 1 382 242 29 117 chr5 21590571 21590600 -178039550 - L2 LINE L2 -614 2700 2670 2095 166 34 0 chr5 21590600 21590979 -178039171 + L1PB3 LINE L1 5763 6154 0 382 242 29 117 chr5 21590979 21591103 -178039047 - L2 LINE L2 -644 2670 2573 285 292 183 7 chr5 21591107 21591244 -178038906 - L2 LINE L2 -956 2358 2198 1361 214 84 25 chr5 21591244 21591600 -178038550 + MLT1B LTR MaLR 1 377 -13 2181 75 9 40 chr5 21591950 21592271 -178037879 - AluY SINE Alu 0 311 1 184 337 145 24 chr5 21592358 21592607 -178037543 - L2 LINE L2 -1841 1473 1195 2038 121 0 0 chr5 21594066 21594346 -178035804 + AluSx SINE Alu 21 300 -12 196 231 26 0 chr5 21594413 21594491 -178035659 + (TA)n Simple_repeat Simple_repeat 2 81 0 249 228 6 51 chr5 21596709 21596867 -178033283 + GA-rich Low_complexity Low_complexity 6 156 0 242 309 9 27 chr5 21597607 21597717 -178032433 - MLT1I LTR MaLR -1 408 301 4371 10 4 0 chr5 21598055 21598558 -178031592 + L1PA2 LINE L1 5650 6154 -1 21 0 0 0 chr5 21598630 21598651 -178031499 + AT_rich Low_complexity Low_complexity 1 21 0 252 59 0 0 chr5 21599423 21599457 -178030693 + (ATG)n Simple_repeat Simple_repeat 2 35 0 34 24 0 0 chr5 21601491 21601532 -178028618 + AT_rich Low_complexity Low_complexity 1 41 0 197 239 75 45 chr5 21601725 21601792 -178028358 - MIR SINE MIR 0 262 194 1540 97 5 0 chr5 21602776 21602993 -178027157 + L1PA8 LINE L1 5953 6170 -2 1043 143 0 0 chr5 21604359 21604544 -178025606 - AluSg/x SINE Alu 0 316 132 535 279 9 92 chr5 21604544 21604773 -178025377 - MIR SINE MIR -50 212 3 1997 113 0 55 chr5 21605239 21605567 -178024583 + AluSp SINE Alu 1 310 -3 7133 42 0 1 chr5 21607094 21607959 -178022191 - L1PA5 LINE L1 -13 6141 5278 * 17151 79 5 2 chr5 21607958 21610793 -178019357 + L1PA7 LINE L1 3019 5858 -296 1526 244 135 37 chr5 21611126 21611666 -178018484 - MLT1E LTR MaLR 0 593 1 320 308 7 28 chr5 21611705 21611848 -178018302 + GA-rich Low_complexity Low_complexity 4 143 0 225 236 158 47 chr5 21612363 21612490 -178017660 + MIR SINE MIR 113 253 -9 344 284 92 0 chr5 21612691 21612800 -178017350 - L2 LINE L2 -1 3312 3194 32 43 0 0 chr5 21612849 21612895 -178017255 + AT_rich Low_complexity Low_complexity 1 46 0 32 91 0 0 chr5 21614231 21614319 -178015831 + AT_rich Low_complexity Low_complexity 1 88 0 2482 47 3 0 chr5 21614327 21614625 -178015525 + AluY SINE Alu 1 299 -12 28 61 0 0 chr5 21614652 21614701 -178015449 + AT_rich Low_complexity Low_complexity 1 49 0 549 237 0 0 chr5 21615802 21615916 -178014234 + FLAM_A SINE Alu 22 135 -7 341 348 82 44 chr5 21616032 21616397 -178013753 + HAL1 LINE L1 1323 1701 -806 1549 239 74 69 chr5 21616405 21616971 -178013179 + L1MA8 LINE L1 23 591 -6439 1169 293 21 24 chr5 21617025 21617557 -178012593 + L1MA8 LINE L1 1864 2393 -4644 7404 178 67 38 chr5 21617566 21619429 -178010721 + L1MA8 LINE L1 4258 6065 -1261 190 0 67 0 chr5 21619429 21619459 -178010691 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 7404 178 67 38 chr5 21619459 21619506 -178010644 + L1MA8 LINE L1 6065 6109 -1217 228 35 0 0 chr5 21619506 21619535 -178010615 + (CA)n Simple_repeat Simple_repeat 2 30 0 7404 178 67 38 chr5 21619535 21619733 -178010417 + L1MA8 LINE L1 6109 6300 -1026 1718 189 70 57 chr5 21619733 21620273 -178009877 + LTR10B LTR ERV1 1 547 0 7404 178 67 38 chr5 21620273 21621052 -178009098 + L1MA8 LINE L1 6300 7326 0 1966 156 116 0 chr5 21621104 21621509 -178008641 - LTR47A LTR ERVL 0 452 1 2045 174 65 55 chr5 21621576 21622082 -178008068 + MER67D LTR ERV1 1 511 -3 306 275 107 34 chr5 21622275 21622537 -178007613 + L1ME LINE L1 5542 5822 -299 27 49 0 0 chr5 21622992 21623033 -178007117 + AT_rich Low_complexity Low_complexity 1 41 0 2181 89 9 16 chr5 21623833 21624180 -178005970 - AluSp SINE Alu 0 313 1 21 36 0 0 chr5 21624807 21624835 -178005315 + AT_rich Low_complexity Low_complexity 1 28 0 37 39 0 0 chr5 21624967 21625018 -178005132 + AT_rich Low_complexity Low_complexity 1 51 0 194 233 17 0 chr5 21625068 21625128 -178005022 + (TATATG)n Simple_repeat Simple_repeat 3 63 0 242 260 82 14 chr5 21625818 21625891 -178004259 - L2 LINE L2 -11 3302 3225 516 323 37 28 chr5 21625895 21626282 -178003868 - L2 LINE L2 -246 3067 2681 196 260 0 0 chr5 21628139 21628189 -178001961 - L2 LINE L2 0 3313 3264 1398 172 0 119 chr5 21628487 21628830 -178001320 - AluSg SINE Alu -8 302 1 285 51 0 0 chr5 21628871 21628910 -178001240 + (GA)n Simple_repeat Simple_repeat 1 39 0 208 354 124 31 chr5 21629245 21629406 -178000744 - L2 LINE L2 -847 2467 2292 483 258 86 38 chr5 21632301 21632510 -177997640 - LTR16A LTR ERVL -95 355 137 311 113 19 0 chr5 21633211 21633264 -177996886 + GA-rich Low_complexity Low_complexity 1 54 0 278 269 255 14 chr5 21633376 21633521 -177996629 + MIR SINE MIR 81 260 -2 311 294 29 10 chr5 21634331 21634433 -177995717 + L2 LINE L2 3208 3311 -2 2578 48 0 3 chr5 21634738 21635047 -177995103 - AluY SINE Alu -3 308 1 2516 39 0 3 chr5 21635515 21635821 -177994329 - AluY SINE Alu -6 305 1 22 0 0 0 chr5 21636574 21636596 -177993554 + AT_rich Low_complexity Low_complexity 1 22 0 354 80 0 0 chr5 21636715 21636765 -177993385 + (TG)n Simple_repeat Simple_repeat 1 50 0 8477 205 39 90 chr5 21638722 21639755 -177990395 + L1MA2 LINE L1 14 1098 -6467 2184 105 17 0 chr5 21639755 21640049 -177990101 + AluSc SINE Alu 1 299 -10 8477 205 39 90 chr5 21640049 21641716 -177988434 + L1MA2 LINE L1 1098 2912 -4653 6510 93 1 0 chr5 21641716 21642769 -177987381 + L1PA8 LINE L1 5106 6159 -13 8477 205 39 90 chr5 21642769 21642805 -177987345 + L1MA2 LINE L1 2912 2948 -4617 7643 172 62 9 chr5 21642775 21644469 -177985681 + L1MA2 LINE L1 4914 6518 -1205 * 2280 105 19 40 chr5 21644469 21644641 -177985509 + THE1B LTR MaLR 1 175 -189 1815 120 0 0 chr5 21644641 21644900 -177985250 + AluY SINE Alu 51 309 -2 2280 105 19 40 chr5 21644900 21645099 -177985051 + THE1B LTR MaLR 175 364 0 11152 104 7 2 chr5 21645099 21646672 -177983478 + THE1B-int LTR MaLR 1 1580 0 2060 148 22 22 chr5 21646672 21647036 -177983114 + THE1B LTR MaLR 1 364 0 7643 172 62 9 chr5 21647036 21648000 -177982150 + L1MA2 LINE L1 6517 7716 -7 1378 244 107 32 chr5 21648038 21648477 -177981673 + MLT1E LTR MaLR 113 584 -9 277 295 86 19 chr5 21648608 21648713 -177981437 + MIR SINE MIR 99 210 -52 195 162 0 0 chr5 21649236 21649273 -177980877 + (TATG)n Simple_repeat Simple_repeat 3 39 0 2358 70 3 3 chr5 21649532 21649830 -177980320 + AluY SINE Alu 1 298 -13 460 196 0 11 chr5 21650537 21650629 -177979521 + FLAM_A SINE Alu 47 137 -5 1200 183 82 63 chr5 21651193 21651560 -177978590 - MLT1A2 LTR MaLR 0 374 1 475 106 12 12 chr5 21651794 21651879 -177978271 + (TCCC)n Simple_repeat Simple_repeat 2 86 0 * 655 121 54 12 chr5 21651870 21652036 -177978114 + CT-rich Low_complexity Low_complexity 1 173 0 324 64 0 0 chr5 21652036 21652155 -177977995 + (TCTG)n Simple_repeat Simple_repeat 1 119 0 1875 150 0 19 chr5 21652083 21652108 -177978042 - AluSx SINE Alu -5 307 283 324 64 0 0 chr5 21652108 21652155 -177977995 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 1875 150 0 19 chr5 21652155 21652442 -177977708 - AluSx SINE Alu -29 283 1 426 20 0 0 chr5 21652571 21652622 -177977528 + (CA)n Simple_repeat Simple_repeat 2 52 0 351 0 0 0 chr5 21652621 21652660 -177977490 + (GA)n Simple_repeat Simple_repeat 2 40 0 * 2254 61 0 4 chr5 21652721 21652998 -177977152 - AluY SINE Alu -20 291 16 623 342 48 58 chr5 21654363 21654778 -177975372 - L3 LINE CR1 -476 1101 691 22 35 0 0 chr5 21654827 21654856 -177975294 + AT_rich Low_complexity Low_complexity 1 29 0 314 65 65 0 chr5 21654860 21654906 -177975244 + MADE1 DNA Mariner 1 49 -31 356 354 65 65 chr5 21654930 21655119 -177975031 - L3 LINE CR1 -1023 554 363 2178 120 0 7 chr5 21655119 21655419 -177974731 + AluSx SINE Alu 3 300 -12 356 354 65 65 chr5 21655419 21655599 -177974551 - L3 LINE CR1 -1213 364 185 2014 175 41 34 chr5 21656413 21656962 -177973188 + MLT2A2 LTR ERVL 1 554 0 262 282 161 16 chr5 21657929 21658053 -177972097 + MIR SINE MIR 65 206 -56 216 146 0 49 chr5 21658167 21658208 -177971942 + L2 LINE L2 3216 3254 -18 1738 147 69 40 chr5 21658212 21658560 -177971590 + MLT1A1 LTR MaLR 1 358 -7 1186 29 0 0 chr5 21659039 21659177 -177970973 - AluY SINE Alu -21 290 153 28 71 0 0 chr5 21661329 21661385 -177968765 + AT_rich Low_complexity Low_complexity 1 56 0 25 31 0 0 chr5 21662834 21662866 -177967284 + AT_rich Low_complexity Low_complexity 1 32 0 220 321 71 18 chr5 21664198 21664310 -177965840 - MIR3 SINE MIR -49 159 42 33 0 0 0 chr5 21664808 21664841 -177965309 + AT_rich Low_complexity Low_complexity 1 33 0 1923 151 0 16 chr5 21667422 21667727 -177962423 + AluSx SINE Alu 1 300 -12 26745 45 2 0 chr5 21668253 21672386 -177957764 + L1PA5 LINE L1 2015 6154 0 2056 142 0 0 chr5 21675246 21675549 -177954601 - AluSg SINE Alu -3 307 5 236 162 0 0 chr5 21675598 21675635 -177954515 + MLT2B3 LTR ERVL 473 509 -45 205 207 17 0 chr5 21675635 21675693 -177954457 + (TA)n Simple_repeat Simple_repeat 1 59 0 * 211 232 18 0 chr5 21675655 21675711 -177954439 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 348 352 23 0 chr5 21676153 21676281 -177953869 + MIR SINE MIR 48 178 -84 2107 91 39 0 chr5 21676586 21676904 -177953246 + AluSx SINE Alu 1 312 0 24 32 0 0 chr5 21677018 21677049 -177953101 + AT_rich Low_complexity Low_complexity 1 31 0 248 313 12 0 chr5 21677983 21678063 -177952087 - MLT1L LTR MaLR -405 210 130 21 0 0 0 chr5 21679277 21679298 -177950852 + AT_rich Low_complexity Low_complexity 1 21 0 338 367 39 50 chr5 21679502 21679859 -177950291 - L2 LINE L2 -408 2906 2554 5848 233 38 65 chr5 21679882 21681717 -177948433 + L1MA4A LINE L1 1 1785 -5064 * 8123 173 23 21 chr5 21681715 21684272 -177945878 + L1MA4A LINE L1 4366 6930 -75 1477 183 55 18 chr5 21684272 21684546 -177945604 - AluJb SINE Alu -23 289 6 8123 173 23 21 chr5 21684546 21684618 -177945532 + L1MA4A LINE L1 6930 7000 -5 1369 219 11 21 chr5 21687471 21687785 -177942365 - AluJo SINE Alu 0 313 3 437 326 31 31 chr5 21689147 21689340 -177940810 - HAL1 LINE L1 -1126 1381 1189 237 296 28 0 chr5 21689718 21689789 -177940361 - AluJ/FRAM SINE Alu -16 286 214 193 102 68 23 chr5 21689829 21689917 -177940233 + (TA)n Simple_repeat Simple_repeat 2 93 0 231 161 56 7 chr5 21689928 21690071 -177940079 + (TA)n Simple_repeat Simple_repeat 2 151 0 446 272 83 74 chr5 21690103 21690427 -177939723 - HAL1 LINE L1 -2178 329 3 2019 112 3 3 chr5 21690544 21690858 -177939292 - AluSq SINE Alu 0 316 3 2631 35 0 6 chr5 21691973 21692286 -177937864 + AluY SINE Alu 1 311 0 23 54 0 0 chr5 21692701 21692738 -177937412 + AT_rich Low_complexity Low_complexity 1 37 0 1528 240 55 83 chr5 21693069 21693405 -177936745 + MER67D LTR ERV1 1 318 -196 1916 134 147 32 chr5 21693405 21693615 -177936535 - MSTA LTR MaLR -4 424 240 2121 127 3 3 chr5 21693615 21693922 -177936228 - AluSp SINE Alu -6 307 1 1916 134 147 32 chr5 21693922 21694091 -177936059 - MSTA LTR MaLR -188 240 1 1528 240 55 83 chr5 21694091 21694283 -177935867 + MER67D LTR ERV1 318 514 0 29 28 0 0 chr5 21694567 21694603 -177935547 + AT_rich Low_complexity Low_complexity 1 36 0 51 83 0 0 chr5 21694957 21695078 -177935072 + AT_rich Low_complexity Low_complexity 1 121 0 465 290 0 0 chr5 21695203 21695303 -177934847 + MER110-int LTR ERV1 3720 3819 -828 556 290 35 56 chr5 21695528 21695814 -177934336 + MER110-int LTR ERV1 3981 4260 -387 23 54 0 0 chr5 21696046 21696083 -177934067 + AT_rich Low_complexity Low_complexity 1 37 0 2369 54 14 3 chr5 21697383 21697678 -177932472 - AluY SINE Alu -13 298 1 297 75 0 0 chr5 21697745 21697785 -177932365 + (CA)n Simple_repeat Simple_repeat 2 41 0 22 88 0 0 chr5 21698172 21698229 -177931921 + AT_rich Low_complexity Low_complexity 1 57 0 440 62 16 0 chr5 21698298 21698362 -177931788 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 22 0 0 0 chr5 21698362 21698384 -177931766 + AT_rich Low_complexity Low_complexity 1 22 0 239 311 139 8 chr5 21698916 21699038 -177931112 - L2 LINE L2 -255 3058 2921 222 191 0 0 chr5 21699092 21699134 -177931016 - L2 LINE L2 0 3313 3272 22 0 0 0 chr5 21699617 21699639 -177930511 + AT_rich Low_complexity Low_complexity 1 22 0 367 271 165 29 chr5 21700134 21700304 -177929846 + MIR SINE MIR 65 257 -5 567 284 98 55 chr5 21700738 21701211 -177928939 + MLT1D LTR MaLR 7 387 -3 3549 230 35 114 chr5 21701214 21702729 -177927421 + MLT1D-int LTR MaLR 1 1371 0 984 281 56 46 chr5 21702729 21703228 -177926922 + MLT1D LTR MaLR 1 504 -1 732 305 44 30 chr5 21703352 21703647 -177926503 - L2 LINE L2 -962 2352 2054 460 240 120 40 chr5 21704081 21704281 -177925869 - LTR45 LTR ERV1 -7 518 303 427 258 95 58 chr5 21704799 21705047 -177925103 + MLT1J LTR MaLR 64 288 -162 1755 188 19 9 chr5 21705429 21705754 -177924396 + MLT1B LTR MaLR 9 336 -54 418 90 13 13 chr5 21706893 21706971 -177923179 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 705 196 0 21 chr5 21708187 21708330 -177921820 - FLAM_C SINE Alu -3 140 1 1305 249 35 46 chr5 21709403 21709837 -177920313 + MLT1C LTR MaLR 39 467 0 3266 234 48 29 chr5 21709837 21710708 -177919442 + MLT1C-int LTR MaLR 1 888 -483 670 239 75 6 chr5 21710838 21710997 -177919153 + MLT1B LTR MaLR 298 467 0 303 306 27 18 chr5 21711006 21711117 -177919033 - MIR SINE MIR -120 142 31 29 0 0 0 chr5 21711892 21711921 -177918229 + AT_rich Low_complexity Low_complexity 1 29 0 2128 121 10 0 chr5 21712664 21712969 -177917181 + AluSq SINE Alu 3 310 -3 1824 182 0 39 chr5 21713504 21713862 -177916288 + MER2 DNA MER2_type 1 344 0 239 380 67 37 chr5 21714867 21715330 -177914820 + L2 LINE L2 2282 2758 -556 292 273 42 7 chr5 21716290 21716433 -177913717 + (TATATG)n Simple_repeat Simple_repeat 6 153 0 29 0 0 0 chr5 21717094 21717123 -177913027 + AT_rich Low_complexity Low_complexity 1 29 0 4106 117 48 0 chr5 21717831 21718454 -177911696 + MER39B LTR ERV1 1 653 0 196 344 113 41 chr5 21718984 21719179 -177910971 - MIR SINE MIR -29 233 25 194 345 63 63 chr5 21720528 21720783 -177909367 + L2 LINE L2 1536 1790 -1524 202 322 150 46 chr5 21720883 21721429 -177908721 - L2 LINE L2 -1044 2270 1668 27 49 0 0 chr5 21722462 21722503 -177907647 + AT_rich Low_complexity Low_complexity 1 41 0 23 33 0 0 chr5 21722999 21723029 -177907121 + AT_rich Low_complexity Low_complexity 1 30 0 285 266 79 89 chr5 21723072 21723333 -177906817 + MLT1H LTR MaLR 1 291 -258 225 229 14 29 chr5 21723501 21723571 -177906579 + MLT1B-int LTR MaLR 5 73 -1298 2695 19 0 3 chr5 21723793 21724101 -177906049 - AluY SINE Alu -4 307 1 1284 224 65 20 chr5 21724711 21724953 -177905197 - Charlie1a DNA MER1_type -1311 1450 1220 1423 240 22 52 chr5 21724953 21725361 -177904789 + MSTD LTR MaLR 1 396 0 1284 224 65 20 chr5 21725361 21725670 -177904480 - Charlie1a DNA MER1_type -1541 1220 811 24 32 0 0 chr5 21725694 21725725 -177904425 + AT_rich Low_complexity Low_complexity 1 31 0 5857 76 14 30 chr5 21725728 21726324 -177903826 - L1P LINE L1 -1544 4602 3998 2005 116 0 0 chr5 21726324 21726601 -177903549 + AluSq SINE Alu 1 277 -36 189 0 0 0 chr5 21726610 21726631 -177903519 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 5857 76 14 30 chr5 21726631 21726880 -177903270 - L1P LINE L1 -2156 3990 3761 6827 139 6 36 chr5 21726880 21728913 -177901237 - L1PA10 LINE L1 -17 6151 4154 6503 71 1 0 chr5 21728917 21729758 -177900392 - L1PA7 LINE L1 -6 6148 5307 2746 150 34 26 chr5 21729762 21730268 -177899882 - L1PA10 LINE L1 -1958 4188 3679 1667 241 62 69 chr5 21730268 21731005 -177899145 - Charlie1a DNA MER1_type -676 779 48 2538 51 0 0 chr5 21731445 21731783 -177898367 + AluY SINE Alu 1 338 0 38 0 0 0 chr5 21731817 21731855 -177898295 + AT_rich Low_complexity Low_complexity 1 38 0 448 306 149 0 chr5 21732092 21732353 -177897797 + MLT1H LTR MaLR 250 549 0 223 167 0 45 chr5 21732782 21732803 -177897347 + (TA)n Simple_repeat Simple_repeat 2 22 -42 189 0 0 0 chr5 21732803 21732824 -177897326 + (GA)n Simple_repeat Simple_repeat 2 22 0 223 167 0 45 chr5 21732824 21732868 -177897282 + (TA)n Simple_repeat Simple_repeat 22 64 0 241 129 0 65 chr5 21732868 21732930 -177897220 + LTR66 LTR ERVL 394 451 -159 34 42 0 0 chr5 21733413 21733461 -177896689 + AT_rich Low_complexity Low_complexity 1 48 0 2019 97 0 0 chr5 21733671 21733938 -177896212 + AluSc SINE Alu 38 304 -5 250 102 51 17 chr5 21734004 21734063 -177896087 + T-rich Low_complexity Low_complexity 2 62 0 233 303 14 32 chr5 21734669 21734815 -177895335 + CT-rich Low_complexity Low_complexity 1 143 0 2191 111 0 0 chr5 21734904 21735193 -177894957 - AluSg SINE Alu -21 289 1 635 307 59 70 chr5 21735372 21735743 -177894407 - MLT1J LTR MaLR -144 367 1 194 62 31 0 chr5 21735877 21735909 -177894241 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 240 229 84 24 chr5 21735916 21735999 -177894151 - L1MC4 LINE L1 -1339 6703 6616 230 79 0 26 chr5 21736171 21736209 -177893941 + (TG)n Simple_repeat Simple_repeat 2 38 0 22 0 0 0 chr5 21736739 21736761 -177893389 + AT_rich Low_complexity Low_complexity 1 22 0 1415 190 7 28 chr5 21736820 21737164 -177892986 - AluJb SINE Alu 0 338 1 21 36 0 0 chr5 21737209 21737237 -177892913 + AT_rich Low_complexity Low_complexity 1 28 0 5787 148 72 27 chr5 21738958 21740134 -177890016 + Tigger3b DNA MER2_type 3 1231 0 243 61 0 0 chr5 21740271 21740304 -177889846 + (TG)n Simple_repeat Simple_repeat 2 34 0 35 41 0 0 chr5 21741243 21741292 -177888858 + AT_rich Low_complexity Low_complexity 1 49 0 348 290 130 35 chr5 21741292 21741523 -177888627 - MIR SINE MIR 0 262 10 190 380 44 0 chr5 21742173 21742286 -177887864 + L2 LINE L2 2296 2413 -901 991 91 14 14 chr5 21742603 21742731 -177887419 + LTR8 LTR ERV1 1 128 -563 2812 110 23 0 chr5 21742731 21743130 -177887020 + MLT2A2 LTR ERVL 2 409 -44 227 156 0 0 chr5 21743138 21743183 -177886967 - LTR66 LTR ERVL -171 439 395 255 125 0 0 chr5 21743209 21743249 -177886901 + (TG)n Simple_repeat Simple_repeat 1 40 0 367 94 0 0 chr5 21743249 21743302 -177886848 + MLT2A2 LTR ERVL 399 451 -2 3580 105 40 42 chr5 21743304 21743665 -177886485 + LTR8 LTR ERV1 123 484 -207 3586 51 2 47 chr5 21743665 21744174 -177885976 + L1PA5 LINE L1 5664 6149 -5 3580 105 40 42 chr5 21744174 21744381 -177885769 + LTR8 LTR ERV1 484 690 -1 21 0 0 0 chr5 21744679 21744700 -177885450 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 21745278 21745300 -177884850 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 180 0 0 0 chr5 21745439 21745459 -177884691 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 230 314 74 138 chr5 21745833 21746129 -177884021 + L2 LINE L2 2995 3271 -1 620 205 92 31 chr5 21746247 21746442 -177883708 - MER3 DNA MER1_type -1 208 2 41 78 0 0 chr5 21746552 21746642 -177883508 + AT_rich Low_complexity Low_complexity 1 90 0 1839 220 74 28 chr5 21748182 21748655 -177881495 - MLT1D LTR MaLR -5 500 6 1858 151 10 0 chr5 21749439 21749730 -177880420 - AluSx SINE Alu -18 294 1 563 237 0 0 chr5 21750086 21750200 -177879950 + FLAM_A SINE Alu 2 115 -18 215 313 0 25 chr5 21751564 21751644 -177878506 + (CATATA)n Simple_repeat Simple_repeat 6 83 0 * 221 246 0 33 chr5 21751592 21751653 -177878497 + (TATATG)n Simple_repeat Simple_repeat 3 61 0 186 43 0 0 chr5 21754987 21755010 -177875140 + (TTC)n Simple_repeat Simple_repeat 2 24 0 980 184 5 74 chr5 21755586 21755803 -177874347 + AluJb SINE Alu 1 202 -110 378 0 0 0 chr5 21755938 21755980 -177874170 + (TG)n Simple_repeat Simple_repeat 1 42 0 192 290 48 0 chr5 21756235 21756297 -177873853 + L2 LINE L2 3206 3270 -2 2047 207 40 72 chr5 21759781 21760529 -177869621 - L1MC3 LINE L1 -528 7257 6534 31 44 0 0 chr5 21761023 21761068 -177869082 + AT_rich Low_complexity Low_complexity 1 45 0 180 296 62 25 chr5 21761563 21761644 -177868506 + L2 LINE L2 2979 3062 -210 266 0 0 29 chr5 21761979 21762014 -177868136 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 354 222 0 0 chr5 21762328 21762400 -177867750 - MLT1A2 LTR MaLR -302 72 1 266 344 194 13 chr5 21762403 21762717 -177867433 - L2 LINE L2 -390 2924 2554 642 214 55 39 chr5 21762819 21763001 -177867149 + MER5A DNA MER1_type 2 186 -3 631 333 94 15 chr5 21763011 21763353 -177866797 - L2 LINE L2 -996 2318 1950 485 242 89 32 chr5 21763363 21763553 -177866597 + MER63B DNA MER1_type 1 201 -235 252 0 0 0 chr5 21763554 21763582 -177866568 + (TA)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr5 21764112 21764133 -177866017 + AT_rich Low_complexity Low_complexity 1 21 0 1179 141 0 0 chr5 21764428 21764598 -177865552 - LTR8 LTR ERV1 -1 690 521 1085 36 7 0 chr5 21764635 21764772 -177865378 - L1PA5 LINE L1 -5 6149 6012 21 71 0 0 chr5 21767564 21767606 -177862544 + AT_rich Low_complexity Low_complexity 1 42 0 338 336 115 65 chr5 21768395 21768889 -177861261 + L2 LINE L2 2296 2814 -500 381 328 147 31 chr5 21769029 21769355 -177860795 + L2 LINE L2 2950 3313 0 23 0 0 0 chr5 21769363 21769386 -177860764 + AT_rich Low_complexity Low_complexity 1 23 0 7694 186 11 15 chr5 21769469 21771925 -177858225 + L1MA6 LINE L1 3786 6239 -61 21 36 0 0 chr5 21771974 21772002 -177858148 + AT_rich Low_complexity Low_complexity 1 28 0 355 210 0 0 chr5 21772516 21772578 -177857572 - MLT1C LTR MaLR 0 467 406 1936 151 3 7 chr5 21772578 21772876 -177857274 - AluSx SINE Alu -15 297 1 594 245 20 7 chr5 21772892 21773043 -177857107 - MLT1A2 LTR MaLR -221 153 1 314 375 157 6 chr5 21773045 21773370 -177856780 - L2 LINE L2 -387 2927 2554 645 337 78 42 chr5 21773421 21773474 -177856676 - L2 LINE L2 -943 2371 2321 684 213 49 38 chr5 21773474 21773657 -177856493 + MER5A DNA MER1_type 2 186 -3 645 337 78 42 chr5 21773657 21774012 -177856138 - L2 LINE L2 -993 2321 1948 1204 252 67 22 chr5 21774021 21774330 -177855820 + MER63B DNA MER1_type 1 335 -727 243 0 0 0 chr5 21774330 21774357 -177855793 + (TG)n Simple_repeat Simple_repeat 2 28 0 1204 252 67 22 chr5 21774357 21774464 -177855686 + MER63B DNA MER1_type 335 436 0 796 216 17 11 chr5 21775275 21775451 -177854699 - MLT1C LTR MaLR 0 467 291 1069 155 0 0 chr5 21775452 21775666 -177854484 - AluSg/x SINE Alu 0 345 132 2041 129 0 17 chr5 21775666 21775825 -177854325 - AluSx SINE Alu -20 292 139 2430 74 0 0 chr5 21775825 21776122 -177854028 - AluSg SINE Alu -13 297 1 2041 129 0 17 chr5 21776122 21776257 -177853893 - AluSx SINE Alu -173 139 3 935 249 64 10 chr5 21776257 21776554 -177853596 - MLT1C LTR MaLR -152 315 3 25 31 0 0 chr5 21777299 21777331 -177852819 + AT_rich Low_complexity Low_complexity 1 32 0 1901 120 36 7 chr5 21777755 21778052 -177852098 + AluY SINE Alu 1 305 0 583 238 49 12 chr5 21778288 21778452 -177851698 - L1MA9 LINE L1 -194 6118 5949 2151 127 0 0 chr5 21778774 21779081 -177851069 - AluSq SINE Alu -6 307 1 2060 102 41 0 chr5 21779091 21779384 -177850766 - AluSx SINE Alu -7 305 1 24 32 0 0 chr5 21779675 21779706 -177850444 + AT_rich Low_complexity Low_complexity 1 31 0 33 43 0 0 chr5 21779773 21779820 -177850330 + AT_rich Low_complexity Low_complexity 1 47 0 21 71 0 0 chr5 21781743 21781785 -177848365 + AT_rich Low_complexity Low_complexity 1 42 0 2188 145 5 35 chr5 21782016 21782389 -177847761 + THE1B LTR MaLR 1 362 -2 1777 152 11 0 chr5 21782781 21783064 -177847086 + AluSx SINE Alu 2 287 -25 292 184 0 26 chr5 21783064 21783140 -177847010 + GA-rich Low_complexity Low_complexity 3 76 0 332 343 127 26 chr5 21783306 21783435 -177846715 + L2 LINE L2 2214 2329 -985 1704 182 0 3 chr5 21783435 21783726 -177846424 + AluJo SINE Alu 13 302 -10 189 0 0 0 chr5 21783732 21783753 -177846397 + (CAGAA)n Simple_repeat Simple_repeat 2 22 0 332 343 127 26 chr5 21783753 21784202 -177845948 + L2 LINE L2 2333 2937 -377 245 29 29 0 chr5 21784337 21784371 -177845779 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2393 78 7 0 chr5 21784838 21785145 -177845005 - AluSc SINE Alu 0 309 1 290 257 18 53 chr5 21785270 21785383 -177844767 + Zaphod DNA AcHobo 3923 4031 0 639 285 75 46 chr5 21785426 21785731 -177844419 + L2 LINE L2 2995 3308 -5 28 71 0 0 chr5 21786720 21786776 -177843374 + AT_rich Low_complexity Low_complexity 1 56 0 309 298 0 22 chr5 21787045 21787151 -177842999 + MER5A DNA MER1_type 7 121 -68 1554 171 21 114 chr5 21787300 21787722 -177842428 - MLT1B LTR MaLR -7 383 1 257 0 30 0 chr5 21788457 21788490 -177841660 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1408 193 11 19 chr5 21788495 21788764 -177841386 - AluJo SINE Alu -30 282 16 8617 40 4 3 chr5 21788864 21789972 -177840178 + L1P LINE L1 2287 3395 -2751 2309 144 13 3 chr5 21790124 21790513 -177839637 - L1MC1 LINE L1 -5 6328 5936 1187 129 18 0 chr5 21790728 21790898 -177839252 + MER1B DNA MER1_type 167 339 0 638 256 14 14 chr5 21790898 21791117 -177839033 - L1M4 LINE L1 -1566 4580 4362 4883 203 10 27 chr5 21791394 21792714 -177837436 + L1MA6 LINE L1 4933 6239 -61 291 289 40 0 chr5 21793158 21793234 -177836916 - AluJ/FLAM SINE Alu -223 79 1 2656 322 81 64 chr5 21793329 21794376 -177835774 + L2 LINE L2 1069 2097 -1216 1319 224 107 57 chr5 21794376 21794817 -177835333 - MER31B LTR ERV1 0 466 4 2656 322 81 64 chr5 21794817 21795980 -177834170 + L2 LINE L2 2097 3312 -1 226 333 0 0 chr5 21796457 21796517 -177833633 - MIR SINE MIR -139 123 64 454 280 60 6 chr5 21797330 21797498 -177832652 - MER115 DNA AcHobo 0 693 517 23 78 0 0 chr5 21797958 21798009 -177832141 + AT_rich Low_complexity Low_complexity 1 51 0 3711 117 29 15 chr5 21799604 21800193 -177829957 - L1PA13 LINE L1 -4 6159 5563 2515 52 0 0 chr5 21800652 21800961 -177829189 + AluY SINE Alu 1 309 -2 187 381 24 0 chr5 21801826 21801910 -177828240 - L2 LINE L2 -6 3266 3181 1692 176 7 7 chr5 21802820 21803115 -177827035 + AluJb SINE Alu 5 299 -13 3985 166 71 42 chr5 21803621 21804528 -177825622 + L1MA10 LINE L1 5401 6333 -1 461 330 198 18 chr5 21805853 21806186 -177823964 - L2 LINE L2 0 3313 2921 756 189 17 83 chr5 21806206 21806386 -177823764 + AluJo SINE Alu 65 232 -80 1222 219 0 33 chr5 21807689 21807985 -177822165 - AluJo SINE Alu 0 308 22 2335 85 3 7 chr5 21808962 21809268 -177820882 - AluSp SINE Alu -8 305 1 1757 123 4 0 chr5 21809574 21809817 -177820333 - AluSx SINE Alu -68 244 1 194 91 30 0 chr5 21810075 21810108 -177820042 + A-rich Low_complexity Low_complexity 3 36 0 2337 216 12 26 chr5 21810949 21811457 -177818693 + MER74A LTR ERVL 3 503 -55 327 110 0 220 chr5 21811531 21811573 -177818577 + MADE1 DNA Mariner 1 10 -70 2510 53 0 37 chr5 21811573 21811894 -177818256 - AluY SINE Alu 0 311 3 327 110 0 220 chr5 21811894 21811951 -177818199 + MADE1 DNA Mariner 10 78 -2 1666 140 61 4 chr5 21812230 21812508 -177817642 - AluJb SINE Alu -7 305 12 1977 167 2 57 chr5 21813541 21813943 -177816207 - L1PA16 LINE L1 -20 6146 5767 1789 170 35 67 chr5 21814000 21814052 -177816098 - MLT1B LTR MaLR -2 388 336 1020 136 29 83 chr5 21814052 21814294 -177815856 + MER30 DNA MER1_type 2 230 0 1789 170 35 67 chr5 21814294 21814642 -177815508 - MLT1B LTR MaLR -54 336 1 2049 135 3 0 chr5 21814895 21815191 -177814959 - AluSx SINE Alu -15 297 1 653 339 55 28 chr5 21815400 21815981 -177814169 + L2 LINE L2 2716 3313 0 213 333 62 49 chr5 21816143 21816368 -177813782 - L2 LINE L2 -230 3042 2815 3124 201 8 5 chr5 21816649 21817251 -177812899 + MER6A DNA MER2_type 1 604 -1 207 232 0 0 chr5 21818117 21818173 -177811977 + (TA)n Simple_repeat Simple_repeat 2 57 0 424 266 66 111 chr5 21818493 21818719 -177811431 - MIR SINE MIR -24 238 23 559 270 111 136 chr5 21819150 21819495 -177810655 + L2 LINE L2 1842 2194 -1119 709 236 30 50 chr5 21819495 21819694 -177810456 + MIR SINE MIR 45 239 -23 559 270 111 136 chr5 21819694 21820180 -177809970 + L2 LINE L2 2194 2691 -622 2146 117 0 32 chr5 21820180 21820496 -177809654 - AluSx SINE Alu -6 306 1 559 270 111 136 chr5 21820496 21820958 -177809192 + L2 LINE L2 2691 3280 -33 444 219 0 0 chr5 21821253 21821349 -177808801 - L1MA6 LINE L1 -6 6294 6199 22 70 0 0 chr5 21821354 21821397 -177808753 + AT_rich Low_complexity Low_complexity 1 43 0 1928 143 0 31 chr5 21821434 21821756 -177808394 - AluSx SINE Alu 0 312 1 21 0 0 0 chr5 21824283 21824304 -177805846 + AT_rich Low_complexity Low_complexity 1 21 0 2580 110 3 6 chr5 21824646 21825011 -177805139 + THE1B LTR MaLR 1 364 0 25 31 0 0 chr5 21825046 21825078 -177805072 + AT_rich Low_complexity Low_complexity 1 32 0 279 54 0 0 chr5 21825180 21825217 -177804933 + (CA)n Simple_repeat Simple_repeat 2 38 0 27 0 0 0 chr5 21827570 21827597 -177802553 + AT_rich Low_complexity Low_complexity 1 27 0 2958 180 36 170 chr5 21827952 21828700 -177801450 - L1MC3 LINE L1 -8 7777 7221 279 309 0 0 chr5 21828700 21828781 -177801369 - MLT1F1 LTR MaLR -442 125 45 2958 180 36 170 chr5 21828781 21829390 -177800760 - L1MC3 LINE L1 -564 7221 6532 31 44 0 0 chr5 21829883 21829928 -177800222 + AT_rich Low_complexity Low_complexity 1 45 0 1722 239 34 30 chr5 21830243 21830746 -177799404 - MLT1D LTR MaLR 0 505 1 4866 118 18 24 chr5 21830751 21831513 -177798637 + MER4E LTR ERV1 1 758 -21 21 0 0 0 chr5 21832549 21832570 -177797580 + AT_rich Low_complexity Low_complexity 1 21 0 918 182 13 0 chr5 21833066 21833225 -177796925 + MER2 DNA MER2_type 1 161 -184 230 371 0 0 chr5 21833277 21833347 -177796803 + MER2 DNA MER2_type 272 341 -4 2186 130 0 0 chr5 21833436 21833736 -177796414 - AluSq SINE Alu -13 300 1 21 57 0 0 chr5 21833794 21833829 -177796321 + AT_rich Low_complexity Low_complexity 1 35 0 452 250 47 75 chr5 21833959 21834288 -177795862 + L1ME LINE L1 5333 5653 -517 189 0 0 0 chr5 21834476 21834497 -177795653 + (TG)n Simple_repeat Simple_repeat 2 22 0 1498 135 104 4 chr5 21835320 21835579 -177794571 + AluSx SINE Alu 2 286 -26 2091 125 0 10 chr5 21836204 21836507 -177793643 + AluSg SINE Alu 1 300 -10 27 62 0 0 chr5 21836552 21836600 -177793550 + AT_rich Low_complexity Low_complexity 1 48 0 301 389 21 21 chr5 21837116 21837260 -177792890 + L1ME LINE L1 443 586 -5533 619 296 100 52 chr5 21837367 21838006 -177792144 + L1ME LINE L1 4121 4790 -1339 300 341 0 0 chr5 21838259 21838388 -177791762 + L1ME LINE L1 4941 5069 -1060 294 281 66 53 chr5 21838478 21838781 -177791369 + L1ME LINE L1 5241 5547 -598 1877 158 0 0 chr5 21839050 21839342 -177790808 + AluJb SINE Alu 1 292 -20 23 0 0 0 chr5 21839566 21839589 -177790561 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 21839833 21839863 -177790287 + AT_rich Low_complexity Low_complexity 1 30 0 356 56 38 62 chr5 21840100 21840179 -177789971 + MLT2C2 LTR ERVL 348 464 0 267 259 0 0 chr5 21841717 21841771 -177788379 - MER115 DNA AcHobo -639 54 1 2038 86 0 0 chr5 21841962 21842217 -177787933 - AluY SINE Alu -12 299 45 244 286 101 17 chr5 21842345 21842464 -177787686 + MIR SINE MIR 125 253 -9 30 45 0 0 chr5 21842754 21842798 -177787352 + AT_rich Low_complexity Low_complexity 1 44 0 192 77 0 0 chr5 21843515 21843541 -177786609 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 31 0 0 0 chr5 21843768 21843799 -177786351 + AT_rich Low_complexity Low_complexity 1 31 0 883 223 66 15 chr5 21844186 21844383 -177785767 - MER58A DNA MER1_type -16 208 2 200 346 103 22 chr5 21845779 21845964 -177784186 + L2 LINE L2 2164 2363 -951 25 40 0 20 chr5 21846506 21846523 -177783627 + AT_rich Low_complexity Low_complexity 1 17 -32 1773 162 0 17 chr5 21846523 21846825 -177783325 - AluJb SINE Alu -15 297 1 25 40 0 20 chr5 21846825 21846857 -177783293 + AT_rich Low_complexity Low_complexity 17 49 0 239 0 32 0 chr5 21847320 21847351 -177782799 + (TTTTTA)n Simple_repeat Simple_repeat 4 35 0 4025 31 4 0 chr5 21847352 21847835 -177782315 - L1PA4 LINE L1 -3 6152 5668 225 167 0 0 chr5 21847838 21847874 -177782276 - MLT1I LTR MaLR -276 133 98 333 218 0 0 chr5 21848016 21848094 -177782056 + GA-rich Low_complexity Low_complexity 3 80 0 182 269 0 19 chr5 21848624 21848676 -177781474 - L2 LINE L2 -1 3312 3262 9770 252 53 26 chr5 21848825 21851511 -177778639 - HERVL-D LTR ERVL -2897 2757 1 335 125 0 0 chr5 21851511 21851559 -177778591 - MLT2D LTR ERVL 0 414 367 367 259 14 0 chr5 21851562 21851701 -177778449 + (TA)n Simple_repeat Simple_repeat 1 141 0 1700 244 6 57 chr5 21851704 21851727 -177778423 - MLT2B1 LTR ERVL -41 479 456 428 0 19 0 chr5 21851727 21851779 -177778371 + (GA)n Simple_repeat Simple_repeat 2 54 0 1700 244 6 57 chr5 21851779 21852260 -177777890 - MLT2B1 LTR ERVL -64 456 1 22 0 0 0 chr5 21852584 21852606 -177777544 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr5 21853188 21853215 -177776935 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 21853340 21853368 -177776782 + AT_rich Low_complexity Low_complexity 1 28 0 26 64 0 0 chr5 21854153 21854200 -177775950 + AT_rich Low_complexity Low_complexity 1 47 0 718 240 87 45 chr5 21854252 21854539 -177775611 + HAL1 LINE L1 248 546 -1961 516 32 0 0 chr5 21854895 21854957 -177775193 + (TA)n Simple_repeat Simple_repeat 2 63 0 27 49 0 0 chr5 21855397 21855438 -177774712 + AT_rich Low_complexity Low_complexity 1 41 0 32 0 0 0 chr5 21855495 21855527 -177774623 + AT_rich Low_complexity Low_complexity 1 32 0 506 236 214 11 chr5 21855711 21855893 -177774257 + MER20 DNA MER1_type 1 219 0 258 309 27 27 chr5 21855991 21856101 -177774049 + MIR SINE MIR 23 132 -76 234 250 0 0 chr5 21856696 21856744 -177773406 + MLT1G1 LTR MaLR 144 191 -404 2240 90 9 0 chr5 21856774 21857096 -177773054 - L1PB1 LINE L1 0 6151 5827 44 0 0 0 chr5 21857464 21857508 -177772642 + AT_rich Low_complexity Low_complexity 1 44 0 1327 60 6 0 chr5 21857546 21857712 -177772438 - AluY SINE Alu -16 295 129 2520 45 6 6 chr5 21857714 21858025 -177772125 - AluY SINE Alu 0 311 1 341 173 107 0 chr5 21858244 21858319 -177771831 + MER103 DNA DNA 82 164 -2 1899 163 33 0 chr5 21858389 21858721 -177771429 - MER2 DNA MER2_type 0 344 2 319 345 40 40 chr5 21858744 21858970 -177771180 + MIR SINE MIR 37 262 0 345 117 0 0 chr5 21858972 21859032 -177771118 + (TGG)n Simple_repeat Simple_repeat 1 60 0 2995 93 61 4 chr5 21859957 21860417 -177769733 + LTR19A LTR ERV1 1 486 0 383 136 0 0 chr5 21860489 21860548 -177769602 - MER20 DNA MER1_type 0 219 161 767 224 18 54 chr5 21860974 21861197 -177768953 - MER20 DNA MER1_type -3 216 2 339 180 11 22 chr5 21861207 21861296 -177768854 - MER5C DNA MER1_type -1 323 236 940 179 0 0 chr5 21861472 21861628 -177768522 - FRAM SINE Alu -10 156 1 183 129 0 0 chr5 21862784 21862815 -177767335 + (TA)n Simple_repeat Simple_repeat 1 31 0 448 349 40 9 chr5 21863995 21864316 -177765834 + MER46C DNA MER2_type 7 337 -1 207 331 100 23 chr5 21864318 21864448 -177765702 - MIR3 SINE MIR -36 172 33 191 250 34 102 chr5 21865704 21865792 -177764358 + MIR SINE MIR 127 208 -54 1519 219 7 3 chr5 21867099 21867391 -177762759 + AluJb SINE Alu 2 294 -18 21 57 0 0 chr5 21868274 21868309 -177761841 + AT_rich Low_complexity Low_complexity 1 35 0 1959 133 0 3 chr5 21868491 21868807 -177761343 - AluSg SINE Alu 0 315 1 22 0 0 0 chr5 21869700 21869722 -177760428 + AT_rich Low_complexity Low_complexity 1 22 0 1475 158 3 108 chr5 21871501 21871836 -177758314 - AluJb SINE Alu -2 300 1 1262 317 129 27 chr5 21872412 21873455 -177756695 + L2 LINE L2 1732 2881 -433 1291 198 19 64 chr5 21873652 21873966 -177756184 + MLT1B LTR MaLR 87 386 -4 23 78 0 0 chr5 21874286 21874337 -177755813 + AT_rich Low_complexity Low_complexity 1 51 0 2098 129 3 0 chr5 21874990 21875293 -177754857 - AluY SINE Alu -7 304 1 686 242 14 14 chr5 21876062 21876281 -177753869 + L1M4 LINE L1 4362 4580 -1566 1113 134 17 12 chr5 21876281 21876453 -177753697 - MER1B DNA MER1_type 0 339 167 2311 144 13 3 chr5 21876658 21877047 -177753103 + L1MC1 LINE L1 5936 6328 -5 25 65 0 0 chr5 21877773 21877819 -177752331 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr5 21878132 21878154 -177751996 + AT_rich Low_complexity Low_complexity 1 22 0 2310 180 80 4 chr5 21879237 21879714 -177750436 + MER67D LTR ERV1 2 514 0 25 75 0 0 chr5 21881463 21881516 -177748634 + AT_rich Low_complexity Low_complexity 1 53 0 279 198 55 33 chr5 21881832 21881923 -177748227 + L1MB3 LINE L1 6090 6182 -1 27 0 0 0 chr5 21882089 21882116 -177748034 + AT_rich Low_complexity Low_complexity 1 27 0 1083 254 40 4 chr5 21882697 21882949 -177747201 + Tigger7 DNA MER2_type 3 263 -470 306 207 17 0 chr5 21882951 21883009 -177747141 + Tigger7 DNA MER2_type 2529 2587 0 30 59 0 0 chr5 21883141 21883192 -177746958 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr5 21883303 21883326 -177746824 + AT_rich Low_complexity Low_complexity 1 23 0 202 281 158 0 chr5 21883462 21883544 -177746606 + L3b LINE CR1 1195 1289 -294 29 78 0 0 chr5 21883954 21884018 -177746132 + AT_rich Low_complexity Low_complexity 1 64 0 2648 29 0 0 chr5 21884594 21884905 -177745245 + AluYa5 SINE Alu 1 311 0 343 224 9 0 chr5 21885419 21885651 -177744499 + (TA)n Simple_repeat Simple_repeat 1 234 0 1418 150 16 8 chr5 21885774 21886097 -177744053 - L1M1 LINE L1 -743 5403 5194 2040 134 42 25 chr5 21886222 21886579 -177743571 - THE1B LTR MaLR 0 364 2 434 304 139 22 chr5 21886859 21887218 -177742932 - L1MC/D LINE L1 -2144 5664 5264 1376 149 5 111 chr5 21887344 21887486 -177742664 - L1M1 LINE L1 -530 5775 5691 1959 141 10 0 chr5 21887486 21887792 -177742358 - AluSc SINE Alu 0 309 1 1376 149 5 111 chr5 21887792 21887992 -177742158 - L1M1 LINE L1 -614 5691 5471 25 51 0 0 chr5 21888384 21888423 -177741727 + AT_rich Low_complexity Low_complexity 1 39 0 2227 107 7 7 chr5 21888786 21889096 -177741054 - AluSx SINE Alu -2 310 1 22 56 0 0 chr5 21890859 21890895 -177739255 + AT_rich Low_complexity Low_complexity 1 36 0 2690 149 32 17 chr5 21891235 21891704 -177738446 - Tigger1 DNA MER2_type 0 2418 1943 2057 195 71 2 chr5 21891704 21892099 -177738051 + MSTA LTR MaLR 1 422 -6 10875 147 19 29 chr5 21892106 21892595 -177737555 - Tigger1 DNA MER2_type -473 1945 1453 1935 113 25 0 chr5 21892595 21892896 -177737254 - AluSx SINE Alu 0 308 1 10875 147 19 29 chr5 21892896 21893873 -177736277 - Tigger1 DNA MER2_type -965 1453 499 2120 117 3 3 chr5 21893873 21894172 -177735978 - AluSp SINE Alu -13 300 2 10875 147 19 29 chr5 21894172 21894638 -177735512 - Tigger1 DNA MER2_type -1919 499 30 22 56 0 0 chr5 21894815 21894851 -177735299 + AT_rich Low_complexity Low_complexity 1 36 0 1880 84 0 0 chr5 21896620 21896859 -177733291 - AluSg/x SINE Alu -6 306 68 1212 166 34 126 chr5 21897943 21898106 -177732044 - AluJb SINE Alu -16 296 176 2024 144 0 0 chr5 21898106 21898411 -177731739 - AluSx SINE Alu -7 305 1 1212 166 34 126 chr5 21898411 21898573 -177731577 - AluJb SINE Alu -136 176 1 180 307 123 26 chr5 21899649 21899763 -177730387 + MIR SINE MIR 16 140 -122 237 159 0 0 chr5 21901238 21901282 -177728868 + CT-rich Low_complexity Low_complexity 2 45 0 4797 131 27 67 chr5 21903378 21904294 -177725856 + THE1-int LTR MaLR 267 1146 -434 525 76 0 0 chr5 21904293 21904372 -177725778 - L1PBa LINE L1 -4427 2436 2358 * 365 295 14 7 chr5 21904884 21905023 -177725127 - L1ME LINE L1 -365 5805 5666 425 339 148 23 chr5 21905703 21906276 -177723874 + L3 LINE CR1 579 1223 -354 2102 120 3 0 chr5 21906627 21906947 -177723203 - AluSx SINE Alu 0 323 3 305 283 109 18 chr5 21906970 21907193 -177722957 - L1ME3A LINE L1 -302 5868 5616 439 294 80 54 chr5 21907701 21908263 -177721887 - L1MEd LINE L1 -4772 1497 946 5225 38 3 0 chr5 21908413 21909040 -177721110 + L1PA5 LINE L1 5517 6145 -9 26 0 0 0 chr5 21909040 21909066 -177721084 + AT_rich Low_complexity Low_complexity 1 26 0 1299 190 149 31 chr5 21909345 21909385 -177720765 + MSTD LTR MaLR 38 72 -324 2109 104 37 13 chr5 21909385 21909683 -177720467 - AluSq SINE Alu -8 305 1 1299 190 149 31 chr5 21909683 21909963 -177720187 + MSTD LTR MaLR 72 396 0 407 330 65 33 chr5 21910031 21910307 -177719843 + LTR33 LTR ERVL 235 519 -2 379 190 27 15 chr5 21910395 21910666 -177719484 + (TA)n Simple_repeat Simple_repeat 1 274 0 494 341 51 20 chr5 21911255 21911510 -177718640 + L2 LINE L2 1443 1705 -1609 193 195 0 24 chr5 21911679 21911720 -177718430 + L3 LINE CR1 1441 1480 -97 641 297 113 63 chr5 21911973 21912515 -177717635 + L2 LINE L2 1776 2344 -970 610 191 20 7 chr5 21912519 21912666 -177717484 + L1MC3 LINE L1 7636 7784 -1 2090 113 37 0 chr5 21915306 21915606 -177714544 + AluSx SINE Alu 1 311 -1 249 318 69 42 chr5 21915800 21915989 -177714161 + L2 LINE L2 2221 2414 -900 420 294 14 65 chr5 21916163 21916377 -177713773 - MLT1K LTR MaLR -3 585 383 209 286 0 0 chr5 21917122 21917171 -177712979 + L2 LINE L2 3255 3303 -10 2386 74 3 3 chr5 21918342 21918463 -177711687 + AluY SINE Alu 1 121 -190 209 30 61 0 chr5 21918463 21918496 -177711654 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2386 74 3 3 chr5 21918496 21918684 -177711466 + AluY SINE Alu 120 310 -1 2084 120 0 13 chr5 21918702 21919001 -177711149 + AluSq SINE Alu 1 295 -18 206 121 0 0 chr5 21919599 21919632 -177710518 + (TAAAA)n Simple_repeat Simple_repeat 1 33 0 209 286 54 62 chr5 21919994 21920106 -177710044 + L2 LINE L2 2915 3025 -288 267 220 10 160 chr5 21920169 21920269 -177709881 + L2 LINE L2 3186 3270 -2 1890 149 68 11 chr5 21920790 21921145 -177709005 + THE1C LTR MaLR 1 375 0 209 323 96 30 chr5 21921622 21921820 -177708330 + L2 LINE L2 2258 2468 -846 539 292 92 26 chr5 21922599 21922794 -177707356 + MIR SINE MIR 27 234 -28 23 0 0 0 chr5 21923690 21923713 -177706437 + AT_rich Low_complexity Low_complexity 1 23 0 727 114 18 0 chr5 21923739 21923853 -177706297 - L1PA13 LINE L1 -18 6145 6030 610 100 11 0 chr5 21923853 21923943 -177706207 + L1PA12 LINE L1 5893 5983 -185 1231 304 154 14 chr5 21925859 21926644 -177703506 - L2 LINE L2 -942 2372 1478 1133 221 32 39 chr5 21927542 21927897 -177702253 + MLT2D LTR ERVL 2 408 -6 1961 137 64 19 chr5 21928908 21929267 -177700883 + THE1C LTR MaLR 1 375 0 3855 131 65 0 chr5 21929268 21929863 -177700287 + THE1C-int LTR MaLR 2 635 -945 2514 94 11 0 chr5 21929863 21930214 -177699936 - THE1A LTR MaLR 0 355 1 6236 129 18 15 chr5 21930214 21931161 -177698989 + THE1C-int LTR MaLR 631 1580 0 1816 148 93 6 chr5 21931161 21931506 -177698644 + THE1C LTR MaLR 1 375 0 522 316 130 33 chr5 21932525 21932886 -177697264 + MLT1J2 LTR MaLR 1 396 -54 317 362 67 37 chr5 21933640 21933938 -177696212 + L2 LINE L2 2217 2523 -791 248 328 69 9 chr5 21934050 21934166 -177695984 - LTR33 LTR ERVL -91 430 308 510 263 53 46 chr5 21934267 21934419 -177695731 - LTR33 LTR ERVL -358 163 11 194 222 111 71 chr5 21934646 21934745 -177695405 + L2 LINE L2 663 765 -2549 222 346 48 119 chr5 21936702 21937207 -177692943 - L2 LINE L2 0 3272 2804 558 184 0 0 chr5 21937267 21937354 -177692796 - Tigger7 DNA MER2_type 0 2487 2401 256 135 0 19 chr5 21937357 21937409 -177692741 - Tigger7 DNA MER2_type -1961 526 476 1229 218 39 18 chr5 21937410 21937690 -177692460 - Tigger7 DNA MER2_type -2201 286 1 206 206 15 29 chr5 21938150 21938218 -177691932 + A-rich Low_complexity Low_complexity 4 70 0 252 248 120 48 chr5 21938246 21938371 -177691779 + L1MC5 LINE L1 7010 7143 -818 216 241 0 35 chr5 21939120 21939178 -177690972 + (CATA)n Simple_repeat Simple_repeat 3 58 0 223 286 12 24 chr5 21939227 21939274 -177690876 + G-rich Low_complexity Low_complexity 4 51 -35 1662 201 27 56 chr5 21939274 21939421 -177690729 + MLT1A1 LTR MaLR 1 151 -214 1585 191 3 33 chr5 21939421 21939725 -177690425 - AluJo SINE Alu -17 295 1 1662 201 27 56 chr5 21939725 21939951 -177690199 + MLT1A1 LTR MaLR 151 363 -2 223 286 12 24 chr5 21939951 21939987 -177690163 + G-rich Low_complexity Low_complexity 51 86 0 201 125 0 0 chr5 21940536 21940568 -177689582 - MIR SINE MIR -112 150 119 2376 143 6 3 chr5 21941266 21941629 -177688521 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr5 21942780 21942808 -177687342 + AT_rich Low_complexity Low_complexity 1 28 0 636 304 122 61 chr5 21942888 21943456 -177686694 + L1M4 LINE L1 2382 2914 -3232 1424 259 72 13 chr5 21943456 21943931 -177686219 - MLT1D LTR MaLR 0 505 3 636 304 122 61 chr5 21943931 21944548 -177685602 + L1M4 LINE L1 2914 3635 -2511 267 195 134 0 chr5 21944719 21944801 -177685349 + L1MB8 LINE L1 1149 1241 -5301 992 239 55 0 chr5 21944805 21945006 -177685144 + L1PA15 LINE L1 2 213 -6574 16549 48 7 2 chr5 21945007 21947865 -177682285 + L1PA5 LINE L1 3274 6147 -7 14843 229 25 26 chr5 21947905 21954158 -177675992 + L1PA15 LINE L1 217 6609 -207 2168 166 38 24 chr5 21954158 21954580 -177675570 - MSTA LTR MaLR 0 428 1 14843 229 25 26 chr5 21954580 21954767 -177675383 + L1PA15 LINE L1 6609 6795 -21 794 133 7 22 chr5 21954770 21954905 -177675245 + MSTA LTR MaLR 296 428 0 1755 254 33 52 chr5 21954938 21955867 -177674283 + L1MB8 LINE L1 1202 2099 -4547 25 0 0 0 chr5 21955922 21955947 -177674203 + AT_rich Low_complexity Low_complexity 1 25 0 1808 235 68 24 chr5 21955974 21956471 -177673679 + MLT2B1 LTR ERVL 1 519 -1 977 249 83 51 chr5 21956551 21957231 -177672919 + L1MB8 LINE L1 2363 3069 -3575 3225 219 45 47 chr5 21957234 21958191 -177671959 + L1MB8 LINE L1 4805 5761 -915 1957 115 7 4 chr5 21958191 21958494 -177671656 + AluSg SINE Alu 3 306 0 3225 219 45 47 chr5 21958494 21959408 -177670742 + L1MB8 LINE L1 5761 6675 -1 1982 177 43 33 chr5 21960682 21961226 -177668924 - MLT2A2 LTR ERVL 0 554 1 2147 73 0 3 chr5 21961347 21961633 -177668517 + AluY SINE Alu 24 308 -3 209 310 20 76 chr5 21961642 21961839 -177668311 - L2 LINE L2 -221 3051 2866 196 368 29 0 chr5 21961901 21961969 -177668181 + MIR SINE MIR 49 118 -90 189 107 0 0 chr5 21961982 21962010 -177668140 + (T)n Simple_repeat Simple_repeat 1 28 0 332 374 138 7 chr5 21963315 21963578 -177666572 + L2 LINE L2 2556 2783 -530 2078 203 49 79 chr5 21963578 21964149 -177666001 - MLT2B3 LTR ERVL 0 554 1 332 374 138 7 chr5 21964149 21964297 -177665853 + L2 LINE L2 2783 3017 -296 386 248 78 35 chr5 21964331 21964472 -177665678 + L2 LINE L2 3167 3313 0 23 0 0 0 chr5 21965223 21965246 -177664904 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr5 21966292 21966315 -177663835 + (T)n Simple_repeat Simple_repeat 1 23 0 12417 158 51 19 chr5 21966315 21968606 -177661544 + Tigger1 DNA MER2_type 55 2417 -1 257 266 65 78 chr5 21969501 21969655 -177660495 - MARNA DNA Mariner -358 228 77 336 343 41 30 chr5 21969670 21969839 -177660311 + MIR SINE MIR 15 185 -77 26 50 0 0 chr5 21969905 21969945 -177660205 + AT_rich Low_complexity Low_complexity 1 40 0 1160 254 58 29 chr5 21969953 21970296 -177659854 - MLT1A2 LTR MaLR -4 370 18 246 245 19 0 chr5 21971736 21971789 -177658361 - L2 LINE L2 -20 3252 3199 211 226 78 87 chr5 21973713 21973828 -177656322 + L2 LINE L2 3012 3125 -188 1771 154 26 47 chr5 21973851 21974234 -177655916 - THE1C LTR MaLR 0 375 1 563 141 45 58 chr5 21974265 21974421 -177655729 + L1MB7 LINE L1 6031 6184 0 966 337 106 33 chr5 21975720 21976364 -177653786 + L2 LINE L2 2129 2819 -495 198 0 0 0 chr5 21976548 21976570 -177653580 + (TTCC)n Simple_repeat Simple_repeat 1 22 0 711 146 26 32 chr5 21976574 21976839 -177653311 + CT-rich Low_complexity Low_complexity 1 263 0 2164 123 7 0 chr5 21976845 21977155 -177652995 - AluSq SINE Alu -1 312 1 1961 114 23 0 chr5 21977193 21977492 -177652658 - AluSp SINE Alu -2 311 6 339 407 66 4 chr5 21977686 21977944 -177652206 + L2 LINE L2 2493 2766 -548 1106 262 16 50 chr5 21978882 21979382 -177650768 + L1ME3 LINE L1 5295 5777 -385 826 155 8 0 chr5 21979422 21979551 -177650599 - AluJb SINE Alu -30 282 153 341 227 0 13 chr5 21979552 21979627 -177650523 - AluSp SINE Alu -106 197 124 349 284 96 57 chr5 21979635 21979978 -177650172 + L1ME3 LINE L1 5791 6160 -6 216 0 0 0 chr5 21979989 21980013 -177650137 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 449 250 39 0 chr5 21980730 21980834 -177649316 - MLT1D LTR MaLR -5 500 393 21 57 0 0 chr5 21981016 21981051 -177649099 + AT_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr5 21982100 21982133 -177648017 + AT_rich Low_complexity Low_complexity 1 33 0 277 233 41 0 chr5 21982252 21982325 -177647825 + (CATA)n Simple_repeat Simple_repeat 1 76 0 362 307 41 5 chr5 21982327 21982545 -177647605 - L1MC4 LINE L1 -122 7920 7695 22 0 0 0 chr5 21982646 21982668 -177647482 + AT_rich Low_complexity Low_complexity 1 22 0 1208 159 5 45 chr5 21983065 21983285 -177646865 - AluJb SINE Alu -99 213 3 21 0 0 0 chr5 21983420 21983441 -177646709 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 21984472 21984496 -177645654 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 21986632 21986660 -177643490 + AT_rich Low_complexity Low_complexity 1 28 0 1969 146 21 29 chr5 21986788 21987166 -177642984 - THE1C LTR MaLR 0 375 1 379 282 103 8 chr5 21987252 21987369 -177642781 - MIR SINE MIR -75 187 60 869 218 29 0 chr5 21987517 21987687 -177642463 - FAM SINE Alu 0 175 1 530 358 100 40 chr5 21988384 21988851 -177641299 + L2 LINE L2 2051 2566 -748 2542 36 0 3 chr5 21988851 21989157 -177640993 - AluY SINE Alu -6 305 1 530 358 100 40 chr5 21989157 21989310 -177640840 + L2 LINE L2 2566 2708 -606 186 341 93 66 chr5 21989418 21989644 -177640506 + L2 LINE L2 2736 2967 -347 372 243 142 20 chr5 21989811 21989959 -177640191 - MER52C LTR ERV1 -139 1139 974 411 160 75 0 chr5 21990812 21990918 -177639232 + L1PB4 LINE L1 6042 6155 -1 2214 147 106 3 chr5 21990964 21991351 -177638799 - MSTC LTR MaLR -1 427 1 183 204 0 0 chr5 21991415 21991459 -177638691 + CT-rich Low_complexity Low_complexity 2 45 0 * 242 106 21 0 chr5 21991454 21991501 -177638649 + (TC)n Simple_repeat Simple_repeat 2 49 0 666 212 45 18 chr5 21991975 21992154 -177637996 + MLT1J LTR MaLR 1 150 -259 241 260 68 48 chr5 21992264 21992410 -177637740 + MLT1L LTR MaLR 445 593 -22 222 37 0 0 chr5 21992738 21992765 -177637385 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 630 185 0 25 chr5 21992765 21992884 -177637266 - FLAM_C SINE Alu -25 118 3 23 0 0 0 chr5 21993284 21993307 -177636843 + AT_rich Low_complexity Low_complexity 1 23 0 1024 185 70 33 chr5 21993658 21993928 -177636222 - L1MA10 LINE L1 -1 6333 6054 640 286 58 0 chr5 21993980 21994169 -177635981 - MER20 DNA MER1_type 0 219 20 433 285 80 0 chr5 21994211 21994348 -177635802 - MLT1J1 LTR MaLR -266 180 33 480 102 66 6 chr5 21994573 21994739 -177635411 + (TA)n Simple_repeat Simple_repeat 1 176 0 1435 225 49 28 chr5 21994883 21995270 -177634880 + MSTD LTR MaLR 2 396 0 2085 135 79 15 chr5 21996737 21997077 -177633073 + THE1B LTR MaLR 3 364 0 6897 91 4 8 chr5 21997077 21998030 -177632120 + THE1B-int LTR MaLR 1 949 -631 1437 67 0 0 chr5 21998027 21998207 -177631943 + THE1B-int LTR MaLR 1391 1570 -10 * 1123 128 59 32 chr5 21998207 21998394 -177631756 + THE1B LTR MaLR 173 364 0 247 221 0 15 chr5 21998399 21998467 -177631683 + (TA)n Simple_repeat Simple_repeat 2 68 0 1470 197 18 82 chr5 21999798 22000188 -177629962 - MLT1A1 LTR MaLR 0 365 1 697 237 139 32 chr5 22000335 22000673 -177629477 - MLT1A2 LTR MaLR 0 374 1 862 47 0 0 chr5 22000933 22001040 -177629110 - THE1-int LTR MaLR -1207 373 267 323 255 89 51 chr5 22002376 22002533 -177627617 - MIR SINE MIR -66 196 34 880 215 38 10 chr5 22002582 22002791 -177627359 + L1MB1 LINE L1 5953 6167 -22 912 206 38 10 chr5 22005232 22005441 -177624709 - L1MB1 LINE L1 -22 6167 5953 276 341 116 12 chr5 22007451 22007624 -177622526 + MIR SINE MIR 24 214 -48 255 278 63 63 chr5 22007713 22007904 -177622246 - MIR SINE MIR -58 204 14 23 0 0 0 chr5 22008264 22008287 -177621863 + AT_rich Low_complexity Low_complexity 1 23 0 324 0 0 0 chr5 22008529 22008565 -177621585 + (TG)n Simple_repeat Simple_repeat 2 37 0 1428 93 4 18 chr5 22011468 22011693 -177618457 - L1MA1 LINE L1 -3 6299 6078 3403 218 60 17 chr5 22012400 22012542 -177617608 - L1MB8 LINE L1 -1 6177 6043 2115 116 0 3 chr5 22012542 22012834 -177617316 - AluSc SINE Alu -17 292 2 3403 218 60 17 chr5 22012834 22013926 -177616224 - L1MB8 LINE L1 -135 6043 4900 345 263 15 80 chr5 22013951 22014088 -177616062 + MIR SINE MIR 108 235 -27 2073 138 0 0 chr5 22014313 22014617 -177615533 + AluSc SINE Alu 1 304 -5 1709 168 0 23 chr5 22014705 22015014 -177615136 - AluJb SINE Alu -10 302 1 25 65 0 0 chr5 22016997 22017043 -177613107 + AT_rich Low_complexity Low_complexity 1 46 0 25 0 0 0 chr5 22017162 22017187 -177612963 + AT_rich Low_complexity Low_complexity 1 25 0 307 350 186 4 chr5 22017584 22017864 -177612286 - L3 LINE CR1 0 1577 1247 437 314 116 5 chr5 22018136 22018343 -177611807 - L3 LINE CR1 -368 1209 980 222 237 130 21 chr5 22018697 22018814 -177611336 + MIR SINE MIR 43 174 -88 269 263 13 0 chr5 22019136 22019212 -177610938 + GA-rich Low_complexity Low_complexity 4 80 0 1752 189 117 8 chr5 22019275 22019661 -177610489 + MSTB1 LTR MaLR 1 428 -4 658 203 0 15 chr5 22020307 22020440 -177609710 - FLAM_A SINE Alu -2 140 10 259 352 0 9 chr5 22020542 22020647 -177609503 - L2 LINE L2 0 3313 3210 204 40 0 0 chr5 22021231 22021256 -177608894 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1233 163 5 5 chr5 22021258 22021460 -177608690 - AluJo SINE Alu -30 282 81 226 222 0 0 chr5 22022073 22022136 -177608014 - L1MC4 LINE L1 -1339 6703 6641 4274 72 5 12 chr5 22022136 22022721 -177607429 - L1PA8 LINE L1 -13 6159 5579 929 124 39 0 chr5 22022724 22022877 -177607273 + L1P LINE L1 4793 4951 -1195 23 0 0 0 chr5 22022878 22022901 -177607249 + AT_rich Low_complexity Low_complexity 1 23 0 2408 59 0 10 chr5 22023387 22023692 -177606458 + AluY SINE Alu 1 302 -9 23 33 0 0 chr5 22023855 22023885 -177606265 + AT_rich Low_complexity Low_complexity 1 30 0 2391 55 0 13 chr5 22024590 22024902 -177605248 + AluY SINE Alu 1 308 -3 1189 229 98 33 chr5 22024988 22025354 -177604796 + MLT1B LTR MaLR 1 390 0 2243 111 3 0 chr5 22025427 22025725 -177604425 - AluSq SINE Alu -14 299 1 531 0 0 0 chr5 22025981 22026040 -177604110 + (TA)n Simple_repeat Simple_repeat 1 59 0 315 0 0 0 chr5 22026040 22026075 -177604075 + (TG)n Simple_repeat Simple_repeat 1 35 0 1763 165 32 3 chr5 22027197 22027482 -177602668 + AluSx SINE Alu 1 293 -19 310 350 68 38 chr5 22027768 22028168 -177601982 + MLT1L LTR MaLR 175 586 -29 483 331 124 0 chr5 22028318 22028584 -177601566 + L2 LINE L2 2127 2425 -889 198 312 111 75 chr5 22028623 22028902 -177601248 + L2 LINE L2 2606 2894 -420 200 337 48 53 chr5 22029217 22029404 -177600746 + L2 LINE L2 3090 3275 -38 214 292 28 0 chr5 22032301 22032373 -177597777 + (TATATG)n Simple_repeat Simple_repeat 1 74 0 297 0 0 0 chr5 22032434 22032467 -177597683 + (CA)n Simple_repeat Simple_repeat 2 34 0 197 353 0 14 chr5 22032522 22032603 -177597547 - MIR SINE MIR -58 150 70 357 62 0 0 chr5 22032794 22032842 -177597308 + (CA)n Simple_repeat Simple_repeat 2 49 0 27 49 0 0 chr5 22033786 22033827 -177596323 + AT_rich Low_complexity Low_complexity 1 41 0 359 293 157 15 chr5 22033906 22034104 -177596046 - L1ME LINE L1 -313 5808 5583 23 0 0 0 chr5 22034965 22034988 -177595162 + AT_rich Low_complexity Low_complexity 1 23 0 180 372 12 12 chr5 22035539 22035625 -177594525 - L2 LINE L2 -13 3300 3215 248 301 68 8 chr5 22036664 22036797 -177593353 + L1M4 LINE L1 2448 2588 -3558 24 0 0 0 chr5 22036797 22036821 -177593329 + AT_rich Low_complexity Low_complexity 1 24 0 206 327 0 0 chr5 22039386 22039441 -177590709 + L2 LINE L2 3200 3254 -18 23 0 0 0 chr5 22039705 22039728 -177590422 + AT_rich Low_complexity Low_complexity 1 23 0 525 340 15 30 chr5 22039917 22040179 -177589971 - MIR SINE MIR -3 259 2 542 247 52 72 chr5 22040402 22040461 -177589689 + MIR SINE MIR 41 100 -162 2209 111 0 7 chr5 22040461 22040768 -177589382 - AluSc SINE Alu -4 305 1 542 247 52 72 chr5 22040768 22040902 -177589248 + MIR SINE MIR 100 230 -32 207 324 42 0 chr5 22042737 22042808 -177587342 - L2 LINE L2 -2 3311 3238 1725 109 7 29 chr5 22042883 22043158 -177586992 + AluSg SINE Alu 38 306 -4 2076 144 0 0 chr5 22043169 22043475 -177586675 + AluSx SINE Alu 1 306 -6 5507 150 62 64 chr5 22043606 22044840 -177585310 + Tigger3b DNA MER2_type 1 1231 0 981 262 63 77 chr5 22045877 22046483 -177583667 + MER77 LTR ERV1 119 679 -4 335 131 33 0 chr5 22047172 22047233 -177582917 + LTR60 LTR ERV1 1 63 -523 230 0 33 0 chr5 22047346 22047376 -177582774 + (CA)n Simple_repeat Simple_repeat 2 32 0 1727 147 41 80 chr5 22047410 22047798 -177582352 + THE1C LTR MaLR 1 373 -2 3831 110 79 90 chr5 22047802 22048583 -177581567 + THE1C-int LTR MaLR 3 775 -805 2451 109 0 62 chr5 22048560 22048992 -177581158 + THE1C-int LTR MaLR 1176 1580 0 * 1886 144 61 25 chr5 22048992 22049354 -177580796 + THE1C LTR MaLR 1 375 0 201 340 70 10 chr5 22049492 22049592 -177580558 + L2 LINE L2 3137 3242 -30 469 345 11 6 chr5 22051289 22051463 -177578687 - MIR SINE MIR -75 187 13 32 26 0 0 chr5 22051535 22051574 -177578576 + AT_rich Low_complexity Low_complexity 1 39 0 3160 109 4 0 chr5 22051574 22052043 -177578107 - L1PB2 LINE L1 0 6151 5681 309 293 89 0 chr5 22052045 22052168 -177577982 - L1ME LINE L1 -293 5828 5695 32 43 0 0 chr5 22052194 22052240 -177577910 + AT_rich Low_complexity Low_complexity 1 46 0 186 284 99 25 chr5 22052446 22052527 -177577623 + MIR SINE MIR 48 134 -128 511 123 0 0 chr5 22052823 22052896 -177577254 - MLT1A1 LTR MaLR 0 365 293 930 160 0 0 chr5 22052943 22053087 -177577063 - MLT1A1 LTR MaLR -221 144 1 2554 194 36 1 chr5 22053246 22054019 -177576131 - L1MC3 LINE L1 0 7785 5428 21 36 0 0 chr5 22054702 22054730 -177575420 + AT_rich Low_complexity Low_complexity 1 28 0 409 254 110 44 chr5 22055021 22055407 -177574743 - L1MEc LINE L1 -4554 1878 1501 325 235 18 123 chr5 22055538 22055708 -177574442 - L1MEc LINE L1 -5136 1273 1122 21 0 0 0 chr5 22055912 22055933 -177574217 + AT_rich Low_complexity Low_complexity 1 21 0 835 249 39 53 chr5 22056055 22056340 -177573810 - MLT1A1 LTR MaLR -84 281 1 679 254 69 78 chr5 22056464 22056978 -177573172 - MLT1E1 LTR MaLR -10 644 1 349 336 78 33 chr5 22057154 22057398 -177572752 + MIR SINE MIR 8 262 0 216 67 0 0 chr5 22057578 22057608 -177572542 + (CAA)n Simple_repeat Simple_repeat 2 31 0 383 282 50 77 chr5 22058469 22058650 -177571500 + MER5B DNA MER1_type 3 178 0 1955 192 0 26 chr5 22059441 22059831 -177570319 - MLT1B LTR MaLR -7 383 4 202 216 0 0 chr5 22059831 22059868 -177570282 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 279 0 0 0 chr5 22059868 22059899 -177570251 + (CA)n Simple_repeat Simple_repeat 2 32 0 1654 223 58 24 chr5 22059903 22060315 -177569835 + MLT1C LTR MaLR 42 467 0 23 54 0 0 chr5 22060344 22060381 -177569769 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr5 22060657 22060684 -177569466 + AT_rich Low_complexity Low_complexity 1 27 0 363 311 56 22 chr5 22061412 22061592 -177568558 + MIR SINE MIR 31 216 -46 181 340 52 26 chr5 22062180 22062333 -177567817 + MIR SINE MIR 106 262 0 319 322 49 28 chr5 22062422 22062565 -177567585 + MIR SINE MIR 21 166 -96 28 29 0 0 chr5 22062808 22062843 -177567307 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 22065007 22065029 -177565121 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 22065907 22065927 -177564223 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2144 124 0 3 chr5 22066330 22066636 -177563514 + AluSx SINE Alu 6 310 -2 218 103 0 26 chr5 22066647 22066686 -177563464 + (GAAAA)n Simple_repeat Simple_repeat 5 42 0 251 264 32 13 chr5 22067075 22067230 -177562920 + (TA)n Simple_repeat Simple_repeat 2 159 0 1307 219 73 76 chr5 22067243 22067687 -177562463 + MLT2B1 LTR ERVL 1 470 -45 444 82 0 0 chr5 22067687 22067748 -177562402 + (TA)n Simple_repeat Simple_repeat 2 62 0 1307 219 73 76 chr5 22067748 22067794 -177562356 + MLT2B1 LTR ERVL 470 515 0 261 274 0 24 chr5 22068396 22068480 -177561670 - L1ME LINE L1 -477 5644 5563 2509 59 0 0 chr5 22068574 22068877 -177561273 + AluY SINE Alu 1 303 -8 536 249 69 29 chr5 22069250 22069423 -177560727 + MIR SINE MIR 68 247 -15 41 0 0 0 chr5 22069437 22069478 -177560672 + AT_rich Low_complexity Low_complexity 1 41 0 3688 119 9 0 chr5 22069798 22070360 -177559790 + L1PA13 LINE L1 5597 6163 0 1110 177 109 53 chr5 22071768 22072051 -177558099 + AluJo SINE Alu 1 299 -3 281 365 119 25 chr5 22074644 22074929 -177555221 - L2 LINE L2 -436 2878 2567 1311 140 48 40 chr5 22075238 22075488 -177554662 + THE1B LTR MaLR 113 364 0 5279 134 5 0 chr5 22075488 22076289 -177553861 + THE1B-int LTR MaLR 1 805 -775 257 267 47 0 chr5 22076391 22076477 -177553673 + MLT1D LTR MaLR 163 252 -253 197 62 0 31 chr5 22076484 22076516 -177553634 + (TA)n Simple_repeat Simple_repeat 2 32 0 361 189 22 0 chr5 22077051 22077141 -177553009 + (TA)n Simple_repeat Simple_repeat 2 93 0 234 75 100 0 chr5 22077292 22077332 -177552818 - L1MA6 LINE L1 -349 5951 5908 2754 179 30 4 chr5 22077503 22078063 -177552087 - L1MA6 LINE L1 -401 5899 5325 1703 174 41 41 chr5 22078278 22078641 -177551509 + MLT1A1 LTR MaLR 1 363 -2 21 0 0 0 chr5 22078763 22078784 -177551366 + AT_rich Low_complexity Low_complexity 1 21 0 316 273 159 15 chr5 22079038 22079170 -177550980 + MIR SINE MIR 73 223 -39 21 0 0 0 chr5 22079614 22079635 -177550515 + AT_rich Low_complexity Low_complexity 1 21 0 237 186 72 41 chr5 22079666 22079763 -177550387 + Charlie1 DNA MER1_type 2575 2674 -87 34 65 0 0 chr5 22080010 22080072 -177550078 + AT_rich Low_complexity Low_complexity 1 62 0 574 186 0 0 chr5 22080072 22080174 -177549976 - FLAM_A SINE Alu -23 119 18 237 255 0 0 chr5 22080259 22080310 -177549840 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 524 305 68 39 chr5 22080452 22080844 -177549306 + L1MC/D LINE L1 5258 5664 -747 5352 168 46 7 chr5 22081249 22082307 -177547843 + L1MA4 LINE L1 5196 6289 -11 29 0 0 0 chr5 22082307 22082336 -177547814 + AT_rich Low_complexity Low_complexity 1 29 0 231 368 9 9 chr5 22083697 22083811 -177546339 - MIR3 SINE MIR -6 202 89 2073 84 0 11 chr5 22084287 22084615 -177545535 - AluY SINE Alu 0 325 1 260 253 27 0 chr5 22084719 22084794 -177545356 - MER67D LTR ERV1 -4 510 434 * 781 284 125 17 chr5 22084768 22085120 -177545030 - MER31B LTR ERV1 -76 390 1 227 167 24 0 chr5 22085234 22085276 -177544874 - MLT1J LTR MaLR -336 175 133 472 212 119 38 chr5 22085749 22086051 -177544099 - MER69 DNA AcHobo -6 2520 2187 228 214 36 24 chr5 22086110 22086194 -177543956 - MER69 DNA AcHobo -449 2077 1993 * 439 293 38 0 chr5 22086180 22086313 -177543837 - MER69 DNA AcHobo -1861 665 528 2223 90 0 13 chr5 22086377 22086678 -177543472 - AluY SINE Alu -14 297 1 2084 99 13 16 chr5 22086823 22087126 -177543024 - AluSq SINE Alu -11 302 1 1774 148 0 14 chr5 22087580 22087877 -177542273 - AluSc SINE Alu 0 309 17 206 86 71 57 chr5 22087966 22088036 -177542114 + (TA)n Simple_repeat Simple_repeat 1 71 0 2096 292 129 20 chr5 22088044 22089246 -177540904 - L2 LINE L2 -13 3300 1967 312 27 0 0 chr5 22091085 22091122 -177539028 + (TG)n Simple_repeat Simple_repeat 1 37 0 181 152 22 65 chr5 22092933 22092979 -177537171 - L2 LINE L2 0 3272 3229 209 373 32 32 chr5 22093055 22093181 -177536969 - L2 LINE L2 -193 3120 2995 876 308 36 98 chr5 22093344 22094010 -177536140 - L2 LINE L2 -650 2664 2040 233 288 27 0 chr5 22094086 22094159 -177535991 - L1MC/D LINE L1 -2211 5597 5523 21 36 0 0 chr5 22095166 22095194 -177534956 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 22095703 22095731 -177534419 + AT_rich Low_complexity Low_complexity 1 28 0 1163 116 12 0 chr5 22095879 22096052 -177534098 - AluSg/x SINE Alu 0 312 138 535 339 117 31 chr5 22096543 22096989 -177533161 - L1MEc LINE L1 -721 1855 1325 22 56 0 0 chr5 22099818 22099854 -177530296 + AT_rich Low_complexity Low_complexity 1 36 0 819 251 16 11 chr5 22102907 22103090 -177527060 + MER5A DNA MER1_type 6 189 0 767 227 92 19 chr5 22103099 22103306 -177526844 + MER58A DNA MER1_type 2 223 -1 464 267 42 36 chr5 22103605 22103770 -177526380 + MLT1I LTR MaLR 244 409 0 200 284 102 0 chr5 22103999 22104087 -177526063 - L2 LINE L2 -559 2755 2659 255 281 0 0 chr5 22104538 22104602 -177525548 - MLT1I LTR MaLR -242 167 104 227 240 104 10 chr5 22105059 22105155 -177524995 - LTR16C LTR ERVL -133 358 254 1854 171 3 0 chr5 22105470 22105779 -177524371 + AluSx SINE Alu 1 310 -2 235 324 139 0 chr5 22106022 22106130 -177524020 - MIR SINE MIR -14 248 126 184 148 11 227 chr5 22106819 22106882 -177523268 - MIR SINE MIR -57 151 110 2251 103 0 3 chr5 22106882 22107182 -177522968 + AluSx SINE Alu 5 303 -9 184 148 11 227 chr5 22107182 22107206 -177522944 - MIR SINE MIR -98 110 83 356 157 68 20 chr5 22107684 22107831 -177522319 + (TA)n Simple_repeat Simple_repeat 2 155 0 21 0 0 0 chr5 22107831 22107852 -177522298 + AT_rich Low_complexity Low_complexity 1 21 0 224 339 68 31 chr5 22109666 22109858 -177520292 + L3 LINE CR1 845 1043 -534 353 326 54 0 chr5 22109887 22110016 -177520134 + L3 LINE CR1 1211 1346 -231 266 127 0 48 chr5 22110100 22110163 -177519987 + (CATATA)n Simple_repeat Simple_repeat 1 60 0 2347 241 92 23 chr5 22110329 22111567 -177518583 - L1ME1 LINE L1 -6 6160 4850 202 262 49 0 chr5 22112514 22112575 -177517575 + A-rich Low_complexity Low_complexity 2 65 0 286 297 0 33 chr5 22112834 22112925 -177517225 + MLT1H LTR MaLR 455 542 -7 2050 129 0 3 chr5 22113183 22113486 -177516664 - AluSq SINE Alu -11 302 1 18263 29 3 0 chr5 22115920 22118187 -177511963 - L1P1 LINE L1 -680 5475 3203 932 152 91 0 chr5 22118187 22118352 -177511798 - THE1B LTR MaLR -183 181 2 408 125 0 0 chr5 22118582 22118646 -177511504 + (TA)n Simple_repeat Simple_repeat 2 65 0 228 152 0 0 chr5 22118646 22118692 -177511458 - LTR66 LTR ERVL -171 439 394 185 217 12 0 chr5 22118692 22118775 -177511375 + (TA)n Simple_repeat Simple_repeat 2 85 0 21 71 0 0 chr5 22119240 22119282 -177510868 + AT_rich Low_complexity Low_complexity 1 42 0 30 27 0 0 chr5 22119569 22119606 -177510544 + AT_rich Low_complexity Low_complexity 1 37 0 241 220 170 64 chr5 22121796 22121937 -177508213 - MLT1J1 LTR MaLR -22 424 269 256 257 14 0 chr5 22122329 22122399 -177507751 + MIR SINE MIR 89 159 -103 2208 115 0 0 chr5 22122845 22123149 -177507001 - AluSx SINE Alu -6 306 3 1643 267 83 20 chr5 22124660 22125166 -177504984 - MLT1E LTR MaLR -30 563 26 836 281 32 5 chr5 22126089 22126310 -177503840 + MER45R DNA AcHobo 1 227 -1354 250 154 0 0 chr5 22126385 22126424 -177503726 + AluJ/FLAM SINE Alu 20 58 -244 343 342 40 7 chr5 22126630 22126779 -177503371 + LTR33 LTR ERVL 12 165 -356 233 224 106 75 chr5 22126846 22127007 -177503143 + LTR33 LTR ERVL 304 469 -52 300 200 0 0 chr5 22127461 22127531 -177502619 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 255 272 0 22 chr5 22127533 22127625 -177502525 + L1MC4 LINE L1 6614 6703 -1339 492 146 0 0 chr5 22127632 22127721 -177502429 + (TATG)n Simple_repeat Simple_repeat 4 92 0 225 0 0 0 chr5 22127725 22127750 -177502400 + (CA)n Simple_repeat Simple_repeat 2 26 0 1413 179 10 34 chr5 22127754 22128051 -177502099 - AluJo SINE Alu -10 302 13 30 27 0 0 chr5 22129040 22129077 -177501073 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr5 22129208 22129231 -177500919 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr5 22129437 22129475 -177500675 + AT_rich Low_complexity Low_complexity 1 38 0 1854 128 19 29 chr5 22129750 22130062 -177500088 + AluSc SINE Alu 1 309 0 3092 144 55 48 chr5 22130567 22131165 -177498985 + MER7C DNA MER2_type 1 602 0 6897 58 4 14 chr5 22131552 22132005 -177498145 + L1PA7 LINE L1 5020 5476 -678 2636 23 0 7 chr5 22132005 22132309 -177497841 + AluY SINE Alu 1 302 -9 6897 58 4 14 chr5 22132309 22132998 -177497152 + L1PA7 LINE L1 5476 6153 -1 459 312 15 7 chr5 22133500 22133670 -177496480 - L1MC/D LINE L1 -528 5638 5486 1570 209 42 35 chr5 22133847 22134248 -177495902 + MLT2C2 LTR ERVL 1 404 -60 1127 246 88 33 chr5 22134764 22135162 -177494988 - LTR52 LTR ERVL 0 421 2 402 294 47 58 chr5 22135892 22136167 -177493983 + L1MEd LINE L1 495 766 -5353 2482 50 3 0 chr5 22136238 22136537 -177493613 + AluY SINE Alu 1 300 -11 225 0 0 0 chr5 22136969 22136994 -177493156 + (TA)n Simple_repeat Simple_repeat 2 26 0 4167 183 32 15 chr5 22137376 22138251 -177491899 + L1MC1 LINE L1 5444 6333 0 210 256 37 0 chr5 22138792 22138874 -177491276 + (TATG)n Simple_repeat Simple_repeat 4 88 0 1407 214 0 11 chr5 22139487 22139796 -177490354 - AluJb SINE Alu 0 309 4 268 144 72 41 chr5 22140095 22140192 -177489958 - Charlie1 DNA MER1_type -87 2674 2575 21 0 0 0 chr5 22140223 22140244 -177489906 + AT_rich Low_complexity Low_complexity 1 21 0 307 290 160 8 chr5 22140688 22140819 -177489331 - MIR SINE MIR -39 223 73 21 0 0 0 chr5 22141073 22141094 -177489056 + AT_rich Low_complexity Low_complexity 1 21 0 1639 172 44 52 chr5 22141216 22141582 -177488568 - MLT1A1 LTR MaLR -2 363 1 2702 10 0 10 chr5 22141810 22142124 -177488026 + AluYa5 SINE Alu 1 311 0 2933 159 29 4 chr5 22142125 22142678 -177487472 + L1MA6 LINE L1 5333 5899 -401 234 75 100 0 chr5 22142849 22142889 -177487261 + L1MA6 LINE L1 5908 5951 -349 361 189 22 0 chr5 22143040 22143130 -177487020 + (TA)n Simple_repeat Simple_repeat 2 93 0 197 62 0 31 chr5 22143665 22143697 -177486453 + (TA)n Simple_repeat Simple_repeat 1 31 0 1104 215 18 0 chr5 22143704 22143927 -177486223 - MLT1D LTR MaLR -253 252 26 642 370 95 7 chr5 22145222 22145674 -177484476 + L3 LINE CR1 665 1156 -421 2168 109 0 3 chr5 22146244 22146546 -177483604 + AluSq SINE Alu 2 302 -11 1773 160 41 39 chr5 22146692 22147055 -177483095 + THE1B LTR MaLR 1 364 0 27 62 0 0 chr5 22147966 22148014 -177482136 + AT_rich Low_complexity Low_complexity 1 48 0 240 266 37 83 chr5 22148032 22148141 -177482009 + L3 LINE CR1 1242 1345 -232 32 57 0 0 chr5 22148757 22148810 -177481340 + AT_rich Low_complexity Low_complexity 1 53 0 241 270 0 0 chr5 22149432 22149495 -177480655 + T-rich Low_complexity Low_complexity 1 63 0 277 217 46 23 chr5 22149891 22150066 -177480084 + (TA)n Simple_repeat Simple_repeat 2 180 0 32 43 0 0 chr5 22150087 22150133 -177480017 + AT_rich Low_complexity Low_complexity 1 46 0 731 276 151 23 chr5 22150603 22150971 -177479179 + MLT1F1 LTR MaLR 39 452 -115 48 32 0 0 chr5 22151004 22151066 -177479084 + AT_rich Low_complexity Low_complexity 1 62 0 252 258 0 15 chr5 22151069 22151135 -177479015 + MLT1F1 LTR MaLR 478 542 0 280 306 0 0 chr5 22151345 22151430 -177478720 + (AATAG)n Simple_repeat Simple_repeat 4 88 0 257 0 30 0 chr5 22151476 22151509 -177478641 + (TG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr5 22151614 22151635 -177478515 + AT_rich Low_complexity Low_complexity 1 21 0 1855 131 0 4 chr5 22151661 22151928 -177478222 + AluSq SINE Alu 46 311 -2 414 294 36 31 chr5 22152000 22152299 -177477851 - MER68 LTR ERV1 -199 363 1 3072 132 7 0 chr5 22152327 22152791 -177477359 - L1PA13 LINE L1 -177 5986 5520 1695 195 7 0 chr5 22152818 22153121 -177477029 + AluJb SINE Alu 1 305 -7 275 269 112 30 chr5 22153698 22153895 -177476255 + MER113 DNA MER1_type? 67 279 -242 1824 160 55 25 chr5 22156024 22156386 -177473764 - THE1C LTR MaLR -2 373 1 2346 131 15 32 chr5 22156386 22156790 -177473360 - THE1C-int LTR MaLR 0 1580 1184 339 218 0 0 chr5 22157861 22157915 -177472235 - AluJ/FRAM SINE Alu -20 282 229 1287 80 0 0 chr5 22157915 22158077 -177472073 + THE1C LTR MaLR 1 162 -213 1442 194 3 41 chr5 22158484 22158538 -177471612 - AluJo SINE Alu -30 282 228 2303 134 5 18 chr5 22158538 22158918 -177471232 + THE1C LTR MaLR 1 375 0 1442 194 3 41 chr5 22158918 22159156 -177470994 - AluJo SINE Alu -84 228 1 1812 179 32 16 chr5 22159382 22159751 -177470399 - THE1C LTR MaLR 0 375 1 198 0 0 0 chr5 22160163 22160185 -177469965 + (TAAAAA)n Simple_repeat Simple_repeat 1 22 0 21 57 0 0 chr5 22160493 22160528 -177469622 + AT_rich Low_complexity Low_complexity 1 35 0 1858 135 32 0 chr5 22161155 22161436 -177468714 + AluSx SINE Alu 1 290 -22 255 133 0 0 chr5 22161620 22161665 -177468485 + (CA)n Simple_repeat Simple_repeat 2 46 0 205 161 0 0 chr5 22162811 22162842 -177467308 + (CA)n Simple_repeat Simple_repeat 2 32 0 2632 82 3 3 chr5 22163132 22163487 -177466663 - THE1A LTR MaLR 0 355 1 21 0 0 0 chr5 22163511 22163532 -177466618 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 22163739 22163762 -177466388 + AT_rich Low_complexity Low_complexity 1 23 0 297 206 31 21 chr5 22164148 22164245 -177465905 + (TA)n Simple_repeat Simple_repeat 1 98 0 5241 174 25 8 chr5 22164269 22164472 -177465678 - L1PA16 LINE L1 -14 6152 5954 1970 116 65 34 chr5 22164472 22164825 -177465325 - THE1B LTR MaLR 0 364 1 5241 174 25 8 chr5 22164825 22166372 -177463778 - L1PA16 LINE L1 -212 5954 4375 492 306 71 37 chr5 22167548 22167816 -177462334 + L2 LINE L2 2873 3149 -164 498 278 32 0 chr5 22167964 22168090 -177462060 - MLT2D LTR ERVL -48 366 237 21 0 0 0 chr5 22168299 22168320 -177461830 + AT_rich Low_complexity Low_complexity 1 21 0 301 235 15 0 chr5 22168378 22168446 -177461704 + MIR3 SINE MIR 121 189 -19 364 237 80 27 chr5 22168522 22168647 -177461503 - MER90 LTR ERV1 0 614 445 2114 180 42 75 chr5 22170209 22170781 -177459369 - MLT2B3 LTR ERVL 0 554 2 189 263 26 66 chr5 22171442 22171518 -177458632 + L2 LINE L2 3193 3265 -7 24 0 0 0 chr5 22172025 22172049 -177458101 + AT_rich Low_complexity Low_complexity 1 24 0 1669 196 27 9 chr5 22172914 22173250 -177456900 + MER2 DNA MER2_type 3 344 0 345 293 104 21 chr5 22173372 22173966 -177456184 - L1ME2 LINE L1 -258 5906 5265 1499 242 35 12 chr5 22174948 22175378 -177454772 - L1MC4 LINE L1 -396 7646 7207 211 216 0 0 chr5 22175398 22175449 -177454701 + (TTTA)n Simple_repeat Simple_repeat 4 54 0 402 288 133 51 chr5 22175464 22175780 -177454370 + L1MC4 LINE L1 7695 8036 -6 545 277 66 51 chr5 22176781 22177055 -177453095 - MER110 LTR ERV1 -48 443 166 228 244 13 39 chr5 22177132 22177210 -177452940 - MER110A LTR ERV1 -298 170 95 249 57 0 0 chr5 22177903 22177938 -177452212 + (TG)n Simple_repeat Simple_repeat 2 36 0 2302 110 0 0 chr5 22179160 22179470 -177450680 - AluSg SINE Alu 0 310 1 355 309 41 0 chr5 22179485 22179582 -177450568 - L2 LINE L2 -14 3299 3199 359 279 12 0 chr5 22179661 22179747 -177450403 - MER110 LTR ERV1 0 491 405 2058 181 38 20 chr5 22179747 22180146 -177450004 + MLT2D LTR ERVL 1 406 -8 848 289 63 38 chr5 22180150 22180544 -177449606 - MER110 LTR ERV1 -83 408 5 2264 95 0 0 chr5 22182894 22183188 -177446962 - AluSg1 SINE Alu -15 294 1 240 264 46 46 chr5 22183640 22183727 -177446423 - L2 LINE L2 -1 3312 3226 258 105 0 0 chr5 22183731 22183769 -177446381 + (T)n Simple_repeat Simple_repeat 1 38 0 22 0 0 0 chr5 22183897 22183919 -177446231 + AT_rich Low_complexity Low_complexity 1 22 0 387 245 108 22 chr5 22185842 22185981 -177444169 + L3b LINE CR1 1224 1374 -209 211 194 0 0 chr5 22186126 22186162 -177443988 + (TATG)n Simple_repeat Simple_repeat 4 39 0 632 301 79 86 chr5 22186210 22186416 -177443734 + L2 LINE L2 2615 2821 -492 1513 70 10 10 chr5 22186416 22186616 -177443534 - AluY SINE Alu -13 298 99 632 301 79 86 chr5 22186616 22186995 -177443155 + L2 LINE L2 2821 3199 -114 2590 26 0 10 chr5 22186995 22187308 -177442842 + AluYa5 SINE Alu 2 311 0 632 301 79 86 chr5 22187308 22187389 -177442761 + L2 LINE L2 3199 3279 -34 7242 45 0 6 chr5 22188122 22189056 -177441094 + L1PA4 LINE L1 5226 6154 -1 1049 118 59 38 chr5 22189057 22189243 -177440907 + THE1B LTR MaLR 175 364 0 1814 145 75 28 chr5 22189248 22189606 -177440544 + THE1C LTR MaLR 1 375 0 428 267 68 23 chr5 22189689 22189937 -177440213 + L1MDa LINE L1 1816 2044 -857 24 53 0 0 chr5 22190107 22190145 -177440005 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr5 22190362 22190385 -177439765 + AT_rich Low_complexity Low_complexity 1 23 0 723 288 53 109 chr5 22190766 22191703 -177438447 - L2 LINE L2 0 3313 2419 1882 144 47 39 chr5 22191715 22192076 -177438074 + THE1B LTR MaLR 1 364 0 6283 102 15 91 chr5 22192076 22193192 -177436958 + THE1B-int LTR MaLR 1 1031 -549 201 323 0 0 chr5 22193213 22193275 -177436875 - MIR SINE MIR -181 81 20 26 30 0 0 chr5 22193614 22193647 -177436503 + AT_rich Low_complexity Low_complexity 1 33 0 210 345 99 35 chr5 22193945 22194177 -177435973 + L3 LINE CR1 483 729 -848 259 356 51 8 chr5 22194806 22194924 -177435226 + MIR SINE MIR 4 126 -136 22 0 0 0 chr5 22196148 22196170 -177433980 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr5 22196408 22196444 -177433706 + AT_rich Low_complexity Low_complexity 1 36 0 372 22 0 0 chr5 22197008 22197053 -177433097 + (TG)n Simple_repeat Simple_repeat 2 46 0 2028 108 0 24 chr5 22197271 22197567 -177432583 + AluSg1 SINE Alu 1 289 -20 469 322 74 17 chr5 22197762 22197992 -177432158 + MIR SINE MIR 19 261 -1 22 0 0 0 chr5 22198580 22198602 -177431548 + AT_rich Low_complexity Low_complexity 1 22 0 199 186 0 43 chr5 22200473 22200543 -177429607 + A-rich Low_complexity Low_complexity 2 68 0 2196 118 0 22 chr5 22201854 22202193 -177427957 - AluSg SINE Alu 0 332 1 1583 152 57 30 chr5 22202804 22203100 -177427050 + AluJo SINE Alu 4 307 -5 2306 77 0 3 chr5 22203200 22203500 -177426650 - AluY SINE Alu -12 299 1 868 320 22 30 chr5 22203644 22204007 -177426143 + LTR16A LTR ERVL 89 448 -2 323 360 86 40 chr5 22204533 22205186 -177424964 + ERVL LTR ERVL 4274 4956 -808 961 186 16 26 chr5 22205673 22205867 -177424283 - L1MA7 LINE L1 -535 5756 5565 2394 169 39 14 chr5 22205867 22206267 -177423883 + L1MA7 LINE L1 5767 6186 -105 2533 122 3 11 chr5 22206267 22206645 -177423505 - THE1C LTR MaLR 0 375 1 2394 169 39 14 chr5 22206645 22206750 -177423400 + L1MA7 LINE L1 6186 6287 -4 559 281 69 10 chr5 22206799 22207002 -177423148 + LTR16A LTR ERVL 1 215 -235 883 122 6 58 chr5 22207021 22207177 -177422973 - Charlie3 DNA MER1_type -4 2706 2559 1157 239 99 18 chr5 22207632 22207966 -177422184 + MLT1A2 LTR MaLR 1 361 -13 4297 240 25 68 chr5 22207979 22208216 -177421934 + MLT1A2-int LTR MaLR 1 247 -1124 829 90 53 0 chr5 22208216 22208349 -177421801 + L1PA12 LINE L1 6028 6167 -1 4297 240 25 68 chr5 22208349 22209510 -177420640 + MLT1A2-int LTR MaLR 247 1339 -32 1057 230 50 66 chr5 22209540 22209936 -177420214 + MLT1B LTR MaLR 1 390 0 407 132 0 3 chr5 22209968 22210040 -177420110 + MLT1B-int LTR MaLR 11 81 -1570 480 35 0 0 chr5 22210379 22210437 -177419713 + (TG)n Simple_repeat Simple_repeat 1 58 0 1907 124 0 11 chr5 22210437 22210719 -177419431 - AluSx SINE Alu -33 279 1 324 308 74 52 chr5 22210741 22211066 -177419084 - L1M4 LINE L1 -2921 3225 2894 345 303 174 13 chr5 22211968 22212123 -177418027 - MER5A DNA MER1_type -1 188 9 2397 85 0 0 chr5 22212644 22212939 -177417211 + AluSg SINE Alu 1 295 -15 410 343 62 0 chr5 22213718 22213864 -177416286 + MIR SINE MIR 37 191 -71 673 347 85 58 chr5 22215471 22216286 -177413864 + L2 LINE L2 2016 2852 -462 259 350 92 48 chr5 22216338 22216675 -177413475 + L2 LINE L2 2929 3280 -33 230 323 39 24 chr5 22216900 22217027 -177413123 + MIR SINE MIR 124 252 -10 710 250 29 0 chr5 22217106 22217278 -177412872 + MER45A DNA AcHobo 1 177 -1 239 173 19 0 chr5 22217650 22217702 -177412448 + (TA)n Simple_repeat Simple_repeat 2 54 0 771 261 41 15 chr5 22218109 22218304 -177411846 - MER58A DNA MER1_type -2 222 23 23 0 0 0 chr5 22218370 22218393 -177411757 + AT_rich Low_complexity Low_complexity 1 23 0 243 331 38 11 chr5 22218519 22218703 -177411447 + MARNA DNA Mariner 201 389 -197 429 20 0 0 chr5 22219423 22219473 -177410677 + (TG)n Simple_repeat Simple_repeat 1 50 0 2209 114 7 0 chr5 22219770 22220076 -177410074 + AluSx SINE Alu 1 308 -4 1839 118 16 26 chr5 22220673 22220978 -177409172 + AluSq SINE Alu 1 302 -11 1745 157 7 21 chr5 22221354 22221641 -177408509 + AluSc SINE Alu 1 283 -26 369 58 0 0 chr5 22221642 22221694 -177408456 + (CA)n Simple_repeat Simple_repeat 2 53 0 1707 298 24 26 chr5 22221805 22222422 -177407728 - MLT2E LTR ERVL -2 626 11 339 345 100 31 chr5 22224444 22224763 -177405387 + L3 LINE CR1 318 658 -919 780 332 18 25 chr5 22226104 22226381 -177403769 + LTR16A LTR ERVL 167 441 -9 345 47 0 0 chr5 22226401 22226444 -177403706 + (CA)n Simple_repeat Simple_repeat 2 44 0 312 314 139 25 chr5 22226854 22227099 -177403051 - MLT1J1 LTR MaLR -173 273 1 663 195 12 41 chr5 22227691 22227860 -177402290 - L1MB2 LINE L1 -17 6154 5991 2148 74 19 42 chr5 22228279 22228588 -177401562 - AluY SINE Alu -3 308 7 764 253 82 17 chr5 22228767 22229072 -177401078 - MSTD LTR MaLR -27 368 1 2311 86 0 13 chr5 22229225 22229526 -177400624 + AluY SINE Alu 1 297 -14 430 293 38 0 chr5 22229590 22229723 -177400427 + MER69 DNA AcHobo 528 665 -1861 444 212 119 38 chr5 22229852 22230154 -177399996 + MER69 DNA AcHobo 2187 2520 -6 232 368 9 9 chr5 22230726 22230840 -177399310 + MIR3 SINE MIR 89 202 -6 29 0 0 0 chr5 22232199 22232228 -177397922 + AT_rich Low_complexity Low_complexity 1 29 0 5297 168 46 7 chr5 22232228 22233286 -177396864 - L1MA4 LINE L1 -11 6289 5196 517 308 71 41 chr5 22233691 22234083 -177396067 - L1MB2 LINE L1 -747 5612 5258 237 255 0 0 chr5 22234225 22234276 -177395874 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 586 186 0 0 chr5 22234361 22234463 -177395687 + FLAM_A SINE Alu 18 119 -23 34 65 0 0 chr5 22234463 22234525 -177395625 + AT_rich Low_complexity Low_complexity 1 62 0 385 292 111 68 chr5 22234581 22234603 -177395547 - L1MB2 LINE L1 -1724 4422 4402 2226 122 0 0 chr5 22234603 22234907 -177395243 + AluSx SINE Alu 1 304 -8 385 292 111 68 chr5 22234907 22235486 -177394664 - L1MB2 LINE L1 -1744 4402 3795 4356 128 26 12 chr5 22235651 22236900 -177393250 + HERV9 LTR ERV1 5832 7121 -1278 1517 196 13 64 chr5 22237051 22237428 -177392722 - L1MB8 LINE L1 -258 5920 5563 3763 183 4 38 chr5 22237428 22238146 -177392004 - MER52A LTR ERV1 0 1755 1062 201 39 0 0 chr5 22240783 22240809 -177389341 + (CAA)n Simple_repeat Simple_repeat 2 27 0 237 33 0 0 chr5 22242574 22242604 -177387546 + (TTTAG)n Simple_repeat Simple_repeat 3 32 0 2473 61 0 0 chr5 22242746 22243043 -177387107 + AluY SINE Alu 1 297 -14 2704 228 51 61 chr5 22243254 22244120 -177386030 - MER52A LTR ERV1 -728 1027 1 1057 229 71 95 chr5 22244123 22246193 -177383957 - L1MB8 LINE L1 -621 5563 3458 2603 97 33 3 chr5 22246193 22246583 -177383567 + L1PA13 LINE L1 5756 6157 -6 1057 229 71 95 chr5 22246583 22247290 -177382860 - L1MB8 LINE L1 -2726 3458 2735 876 206 53 123 chr5 22247297 22247656 -177382494 - MLT1A1 LTR MaLR -24 341 8 260 237 0 0 chr5 22247671 22247730 -177382420 - L1MB8 LINE L1 -3424 2722 2664 1533 194 52 52 chr5 22249117 22249504 -177380646 - MLT1B LTR MaLR 0 390 4 705 282 100 38 chr5 22250490 22250830 -177379320 + L3 LINE CR1 1201 1561 -16 191 377 65 29 chr5 22251179 22251317 -177378833 + L2 LINE L2 3171 3313 0 26 0 0 0 chr5 22252111 22252137 -177378013 + AT_rich Low_complexity Low_complexity 1 26 0 265 319 88 35 chr5 22253933 22254275 -177375875 + HAL1 LINE L1 1197 1556 -951 599 250 12 6 chr5 22254891 22255059 -177375091 - MER3 DNA MER1_type -87 122 1 25 31 0 0 chr5 22255076 22255108 -177375042 + AT_rich Low_complexity Low_complexity 1 32 0 1073 201 91 77 chr5 22255131 22255494 -177374656 - MLT1A2 LTR MaLR -4 370 3 2216 118 0 0 chr5 22257472 22257776 -177372374 + AluSx SINE Alu 1 304 -8 2110 126 49 20 chr5 22258832 22259182 -177370968 - THE1B LTR MaLR -4 360 1 321 346 15 8 chr5 22259344 22259477 -177370673 + MIR SINE MIR 1 134 -128 248 109 0 22 chr5 22259484 22259530 -177370620 + (CAT)n Simple_repeat Simple_repeat 2 46 0 237 219 0 0 chr5 22260053 22260126 -177370024 + (CAT)n Simple_repeat Simple_repeat 3 75 0 4442 134 6 6 chr5 22260451 22261149 -177369001 - L1P LINE L1 -1754 4392 3694 276 30 0 0 chr5 22261149 22261182 -177368968 + (TTG)n Simple_repeat Simple_repeat 1 33 0 6070 76 32 8 chr5 22261195 22262748 -177367402 + L1PA8A LINE L1 4553 6125 -6 22 0 0 0 chr5 22263092 22263114 -177367036 + AT_rich Low_complexity Low_complexity 1 22 0 712 223 121 64 chr5 22263963 22264367 -177365783 - MSTC LTR MaLR 0 428 2 237 338 58 22 chr5 22264368 22264507 -177365643 + L2 LINE L2 2213 2356 -958 2495 124 6 3 chr5 22264508 22264871 -177365279 - THE1B LTR MaLR 0 364 1 240 122 0 0 chr5 22264949 22264990 -177365160 + (CA)n Simple_repeat Simple_repeat 2 42 0 361 366 52 6 chr5 22265057 22265229 -177364921 + L2 LINE L2 2525 2704 -610 22 56 0 0 chr5 22265329 22265365 -177364785 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr5 22265472 22265500 -177364650 + AT_rich Low_complexity Low_complexity 1 28 0 227 333 0 12 chr5 22265716 22265797 -177364353 + L2 LINE L2 3234 3313 0 194 296 0 0 chr5 22265778 22265832 -177364318 - L2 LINE L2 -803 2511 2458 * 207 0 0 0 chr5 22266245 22266268 -177363882 + (ATG)n Simple_repeat Simple_repeat 3 25 0 22 0 0 0 chr5 22267770 22267792 -177362358 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 22268938 22268960 -177361190 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 22269045 22269069 -177361081 + AT_rich Low_complexity Low_complexity 1 24 0 1914 158 3 0 chr5 22269159 22269469 -177360681 - AluSx SINE Alu -1 311 1 1646 211 118 10 chr5 22270120 22270536 -177359614 - LOR1b LTR ERV1 0 461 1 31 58 0 0 chr5 22270646 22270698 -177359452 + AT_rich Low_complexity Low_complexity 1 52 0 2514 180 20 14 chr5 22270857 22271367 -177358783 + LTR10D LTR ERV1 1 513 0 306 259 103 9 chr5 22271388 22271504 -177358646 + MIR SINE MIR 47 173 -89 789 250 116 16 chr5 22271555 22271867 -177358283 + MER57B LTR ERV1 3 369 -65 259 170 0 21 chr5 22271876 22271923 -177358227 + LTR12 LTR ERV1 54 99 -615 * 16149 103 26 8 chr5 22271921 22274267 -177355883 + HERV9 LTR ERV1 3357 5746 -2653 5903 121 9 0 chr5 22274370 22275237 -177354913 + HERV9 LTR ERV1 7525 8399 0 266 211 0 0 chr5 22275237 22275289 -177354861 + LTR30 LTR ERV1 1 52 -670 850 149 187 154 chr5 22275289 22275747 -177354403 + LTR12 LTR ERV1 55 480 -234 1976 171 6 9 chr5 22275755 22276099 -177354051 + MER21A LTR ERV1 589 931 0 232 299 100 53 chr5 22276212 22276513 -177353637 - L1M4 LINE L1 -1979 4167 3853 1304 92 31 0 chr5 22276557 22276753 -177353397 - HERV9 LTR ERV1 -26 8373 8172 431 300 68 34 chr5 22276753 22276990 -177353160 + L1M4 LINE L1 16 260 -6282 2336 97 0 3 chr5 22276996 22277307 -177352843 + AluSx SINE Alu 3 312 0 845 111 0 0 chr5 22277725 22277842 -177352308 - AluY SINE Alu -43 268 152 365 256 16 16 chr5 22278698 22278819 -177351331 - Looper DNA T2_type -8 1550 1430 1103 233 17 10 chr5 22278837 22279125 -177351025 - Looper DNA T2_type -598 960 671 23 54 0 0 chr5 22279125 22279162 -177350988 + AT_rich Low_complexity Low_complexity 1 37 0 556 292 78 10 chr5 22279176 22279368 -177350782 - MER3 DNA MER1_type 0 209 5 648 248 31 0 chr5 22279376 22279537 -177350613 - Looper DNA T2_type -893 665 500 221 176 0 59 chr5 22279799 22279867 -177350283 + GA-rich Low_complexity Low_complexity 1 64 0 413 133 36 24 chr5 22279993 22280076 -177350074 - MLT1D LTR MaLR 0 505 422 2150 238 72 65 chr5 22280076 22280430 -177349720 - L1MCb LINE L1 -4881 1026 676 1856 154 24 0 chr5 22280430 22280723 -177349427 + AluSx SINE Alu 1 300 -12 2150 238 72 65 chr5 22280723 22281140 -177349010 - L1MCb LINE L1 -5231 676 264 2099 111 0 0 chr5 22281140 22281456 -177348694 - AluSc SINE Alu 0 316 1 2150 238 72 65 chr5 22281456 22281711 -177348439 - L1MCb LINE L1 -5643 264 12 228 67 0 0 chr5 22281711 22281741 -177348409 + (TA)n Simple_repeat Simple_repeat 1 30 0 228 35 0 0 chr5 22281742 22281771 -177348379 + (GA)n Simple_repeat Simple_repeat 2 30 0 2150 238 72 65 chr5 22281771 22282078 -177348072 - L1MCb LINE L1 -5575 332 29 5755 40 0 19 chr5 22282903 22283637 -177346513 - L1PA3 LINE L1 -3 6152 5433 28 61 0 0 chr5 22284311 22284360 -177345790 + AT_rich Low_complexity Low_complexity 1 49 0 228 94 0 0 chr5 22284560 22284592 -177345558 + U3 snRNA snRNA 1 32 -185 23 68 0 0 chr5 22284618 22284662 -177345488 + AT_rich Low_complexity Low_complexity 1 44 0 451 221 0 16 chr5 22285089 22285211 -177344939 - MER53 DNA DNA 0 189 70 453 222 0 17 chr5 22285247 22285364 -177344786 - MER53 DNA DNA -74 115 1 545 333 75 4 chr5 22285370 22285598 -177344552 + MLT2E LTR ERVL 18 261 -367 417 284 38 49 chr5 22285619 22285802 -177344348 + MLT2E LTR ERVL 386 566 -62 2398 305 50 47 chr5 22286097 22287384 -177342766 + ERVL-E LTR ERVL 4448 5739 -25 243 273 91 11 chr5 22287386 22287474 -177342676 + MLT2E LTR ERVL 11 105 -523 1459 294 83 37 chr5 22287673 22287920 -177342230 + MLT1E LTR MaLR 1 235 -358 2340 185 12 26 chr5 22287920 22288413 -177341737 + MER66B LTR ERV1 1 486 0 1459 294 83 37 chr5 22288413 22288732 -177341418 + MLT1E LTR MaLR 235 593 0 251 236 0 0 chr5 22288732 22288785 -177341365 + MLT2E LTR ERVL 576 628 0 21 0 0 0 chr5 22289109 22289130 -177341020 + AT_rich Low_complexity Low_complexity 1 21 0 246 341 8 32 chr5 22289167 22289290 -177340860 + MER5A DNA MER1_type 38 157 -32 28 0 0 0 chr5 22289737 22289765 -177340385 + AT_rich Low_complexity Low_complexity 1 28 0 255 93 0 0 chr5 22290239 22290282 -177339868 + (TTAG)n Simple_repeat Simple_repeat 2 44 0 1925 130 7 0 chr5 22290282 22290567 -177339583 - AluSx SINE Alu -25 287 1 41 36 0 0 chr5 22291213 22291268 -177338882 + AT_rich Low_complexity Low_complexity 1 55 0 2198 48 7 0 chr5 22291286 22291556 -177338594 - AluY SINE Alu -11 300 29 23 86 0 0 chr5 22291797 22291855 -177338295 + AT_rich Low_complexity Low_complexity 1 58 0 338 214 20 0 chr5 22292325 22292423 -177337727 + (TATG)n Simple_repeat Simple_repeat 4 103 0 212 184 0 0 chr5 22292456 22292494 -177337656 + (TA)n Simple_repeat Simple_repeat 2 39 0 181 353 59 34 chr5 22292707 22292826 -177337324 - L2 LINE L2 -464 2850 2729 23 0 0 0 chr5 22293601 22293624 -177336526 + AT_rich Low_complexity Low_complexity 1 23 0 3879 178 32 11 chr5 22293916 22294735 -177335415 - L1MA8 LINE L1 -3 6288 5453 279 130 0 19 chr5 22294735 22294817 -177335333 + Alu SINE Alu 226 306 0 473 178 14 55 chr5 22294820 22294966 -177335184 - L1MCb LINE L1 -4965 1080 941 431 276 16 8 chr5 22294962 22295085 -177335065 - L1MCb LINE L1 -6267 297 174 * 25 31 0 0 chr5 22295112 22295144 -177335006 + AT_rich Low_complexity Low_complexity 1 32 0 713 279 82 34 chr5 22295261 22295737 -177334413 - L1ME3A LINE L1 -5 6165 5667 340 222 12 0 chr5 22296067 22296148 -177334002 - L1MB4 LINE L1 0 6180 6099 2473 178 28 0 chr5 22296156 22296623 -177333527 - L1MB4 LINE L1 -524 5809 5330 1261 234 39 28 chr5 22296618 22297007 -177333143 + L1M4 LINE L1 4687 5079 -1067 * 333 316 128 45 chr5 22298284 22298572 -177331578 - HAL1 LINE L1 -1386 1121 810 215 308 19 10 chr5 22299512 22299616 -177330534 - MIR SINE MIR -14 248 144 288 170 0 0 chr5 22300418 22300471 -177329679 + (TA)n Simple_repeat Simple_repeat 1 53 0 579 275 47 65 chr5 22300536 22301042 -177329108 + HAL1 LINE L1 828 1324 -1183 279 0 0 0 chr5 22301098 22301129 -177329021 + (CA)n Simple_repeat Simple_repeat 2 32 0 1532 203 36 46 chr5 22301329 22301554 -177328596 - MLT1B LTR MaLR 0 390 169 2229 59 6 86 chr5 22301554 22301891 -177328259 - AluY SINE Alu -1 310 1 1532 203 36 46 chr5 22301891 22302054 -177328096 - MLT1B LTR MaLR -221 169 6 208 208 0 42 chr5 22302078 22302126 -177328024 + (TAAAG)n Simple_repeat Simple_repeat 2 47 0 794 231 71 130 chr5 22302169 22302606 -177327544 + MLT2B1 LTR ERVL 4 414 0 434 429 49 7 chr5 22302608 22303025 -177327125 - L2 LINE L2 -270 3043 2609 8533 220 16 9 chr5 22304123 22304249 -177325901 - L1PA15 LINE L1 -2 7601 7477 3328 88 5 0 chr5 22304249 22304691 -177325459 - MLT2A1 LTR ERVL 0 444 1 8533 220 16 9 chr5 22304691 22307446 -177322704 - L1PA15 LINE L1 -126 7477 4707 938 251 42 26 chr5 22307452 22307554 -177322596 - L1P LINE L1 -3788 3796 3697 2129 164 14 22 chr5 22307554 22307921 -177322229 + THE1B LTR MaLR 1 364 0 938 251 42 26 chr5 22307921 22308163 -177321987 - L1P LINE L1 -3887 3697 3447 1949 125 45 17 chr5 22308179 22308532 -177321618 - L1PA10 LINE L1 -13 6155 5793 4729 264 51 31 chr5 22311563 22311809 -177318341 - L1PA15 LINE L1 -3896 3688 3448 5767 110 19 4 chr5 22311809 22312819 -177317331 - L1PA10 LINE L1 -13 6155 5136 4729 264 51 31 chr5 22312819 22315149 -177315001 - L1PA15 LINE L1 -4136 3448 1070 1175 306 43 10 chr5 22315169 22315652 -177314498 - L1PA15 LINE L1 -7076 505 7 428 167 0 0 chr5 22315794 22315860 -177314290 + FLAM_A SINE Alu 2 67 -65 2181 110 3 7 chr5 22316384 22316683 -177313467 - AluSg SINE Alu -12 298 1 2340 161 31 10 chr5 22316884 22317300 -177312850 - MSTA LTR MaLR 0 428 4 28 0 0 0 chr5 22317418 22317446 -177312704 + AT_rich Low_complexity Low_complexity 1 28 0 677 258 53 27 chr5 22317643 22318110 -177312040 - L1ME LINE L1 -562 5602 5121 1817 91 91 31 chr5 22318593 22318913 -177311237 + HERVH LTR ERV1 7375 7713 0 1019 185 124 79 chr5 22318913 22319307 -177310843 + LTR7 LTR ERV1 1 412 -38 186 208 0 0 chr5 22319816 22319864 -177310286 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 261 284 106 80 chr5 22320184 22320459 -177309691 + LTR33 LTR ERVL 217 498 -23 305 237 10 72 chr5 22320554 22320651 -177309499 - L1MC4 LINE L1 -1337 6705 6615 218 191 0 16 chr5 22320662 22320725 -177309425 + (TA)n Simple_repeat Simple_repeat 1 62 0 21 0 0 0 chr5 22320995 22321016 -177309134 + AT_rich Low_complexity Low_complexity 1 21 0 41 66 0 0 chr5 22321105 22321181 -177308969 + AT_rich Low_complexity Low_complexity 1 76 0 2956 177 49 13 chr5 22321189 22321742 -177308408 - Tigger7 DNA MER2_type -159 574 2 1394 208 40 55 chr5 22321748 22322127 -177308023 - MER67D LTR ERV1 -140 374 2 1706 113 16 0 chr5 22322381 22322629 -177307521 + L1PB1 LINE L1 5540 5791 -360 311 149 75 9 chr5 22322629 22322736 -177307414 + (TA)n Simple_repeat Simple_repeat 1 114 0 2415 126 0 13 chr5 22322739 22323113 -177307037 + L1PB1 LINE L1 5782 6150 -1 1161 242 38 46 chr5 22323326 22323719 -177306431 - MLT1B LTR MaLR 0 390 1 1980 98 10 13 chr5 22324494 22324799 -177305351 - L1PA13 LINE L1 -208 5960 5657 1301 121 5 0 chr5 22324799 22324992 -177305158 + L1PA13 LINE L1 5957 6155 -8 574 208 29 87 chr5 22325695 22325801 -177304349 + MLT1A1 LTR MaLR 170 260 -105 2003 161 31 6 chr5 22325801 22326156 -177303994 + THE1B LTR MaLR 1 364 0 574 208 29 87 chr5 22326156 22326256 -177303894 + MLT1A1 LTR MaLR 260 364 -1 2478 51 0 0 chr5 22327680 22327974 -177302176 - AluY SINE Alu -17 294 1 2093 113 3 10 chr5 22328550 22328851 -177301299 + AluSx SINE Alu 1 299 -13 1506 153 80 0 chr5 22328870 22329132 -177301018 + AluJb SINE Alu 1 283 -29 2105 124 7 0 chr5 22329863 22330153 -177299997 - AluSg SINE Alu -18 292 1 21 57 0 0 chr5 22331197 22331232 -177298918 + AT_rich Low_complexity Low_complexity 1 35 0 1500 202 94 11 chr5 22331424 22331880 -177298270 + LTR54B LTR ERV1 1 494 -4 332 117 0 17 chr5 22332019 22332079 -177298071 + (TCC)n Simple_repeat Simple_repeat 3 61 0 5813 131 40 16 chr5 22332200 22333083 -177297067 + L1MA4A LINE L1 5166 6077 -226 527 92 0 0 chr5 22333083 22333159 -177296991 - MADE1 DNA Mariner -1 79 4 5813 131 40 16 chr5 22333159 22333389 -177296761 + L1MA4A LINE L1 6077 6300 -3 16616 169 64 33 chr5 22334396 22334793 -177295357 + L1MA1 LINE L1 16 399 -7166 250 125 0 0 chr5 22334793 22334833 -177295317 - MADE1 DNA Mariner -14 66 27 16616 169 64 33 chr5 22334833 22337725 -177292425 + L1MA1 LINE L1 399 3447 -4118 257 0 0 197 chr5 22337726 22337787 -177292363 - L1M1 LINE L1 -4466 3099 3051 * 5829 203 32 17 chr5 22337762 22339312 -177290838 - L1 LINE L1 -2497 5068 3478 1050 8 0 0 chr5 22339312 22339431 -177290719 + (TTCC)n Simple_repeat Simple_repeat 2 120 0 5829 203 32 17 chr5 22339431 22339812 -177290338 - L1 LINE L1 -4087 3478 3104 * 6657 186 16 18 chr5 22339810 22341238 -177288912 + L1MA1 LINE L1 5160 6585 -980 3598 140 18 5 chr5 22341782 22342465 -177287685 + L1MA1 LINE L1 6576 7267 -454 763 58 19 0 chr5 22345010 22345114 -177285036 + L1PA7 LINE L1 6048 6153 -1 294 169 92 15 chr5 22347146 22347211 -177282939 + Tigger5 DNA MER2_type 10 79 -2244 * 1126 210 25 4 chr5 22347204 22347442 -177282708 + Tigger5 DNA MER2_type 2081 2323 0 253 309 25 0 chr5 22348459 22348540 -177281610 - L2 LINE L2 -4 3268 3186 300 352 27 32 chr5 22349130 22349349 -177280801 - L2 LINE L2 -1 3312 3095 203 378 26 39 chr5 22349328 22349484 -177280666 - L2 LINE L2 -836 2478 2325 * 969 131 0 0 chr5 22350454 22350591 -177279559 + FLAM_C SINE Alu 7 143 0 1158 180 5 14 chr5 22350592 22350803 -177279347 + AluJo SINE Alu 104 312 0 1900 158 48 0 chr5 22351159 22351489 -177278661 + MER7A DNA MER2_type 3 346 0 233 57 29 0 chr5 22351821 22351856 -177278294 + (TTA)n Simple_repeat Simple_repeat 1 36 0 1064 193 80 75 chr5 22352604 22352966 -177277184 + MLT1A1 LTR MaLR 1 364 -1 1654 260 87 49 chr5 22353011 22353691 -177276459 - L1M4 LINE L1 -1062 5084 4360 1333 214 32 21 chr5 22353691 22353976 -177276174 - AluJo SINE Alu -24 288 1 1654 260 87 49 chr5 22353976 22354191 -177275959 - L1M4 LINE L1 -1786 4360 4155 702 276 112 23 chr5 22354214 22354669 -177275481 - L1M4 LINE L1 -2606 3540 3010 2008 136 7 0 chr5 22354669 22354971 -177275179 - AluSc SINE Alu -5 304 1 702 276 112 23 chr5 22354971 22355157 -177274993 - L1M4 LINE L1 -3136 3010 2842 261 249 110 29 chr5 22355257 22355430 -177274720 + L1ME1 LINE L1 1412 1598 -4942 1059 242 68 42 chr5 22355432 22355799 -177274351 + L1ME1 LINE L1 5769 6153 -407 2404 65 3 0 chr5 22355799 22356106 -177274044 + AluY SINE Alu 1 308 -3 1059 242 68 42 chr5 22356106 22356232 -177273918 + L1ME1 LINE L1 6153 6274 -286 354 107 0 0 chr5 22356530 22356586 -177273564 + (TG)n Simple_repeat Simple_repeat 1 56 0 278 245 0 11 chr5 22356598 22356692 -177273458 + CT-rich Low_complexity Low_complexity 4 96 0 932 234 0 5 chr5 22360918 22361132 -177269018 + L1MB5 LINE L1 5950 6162 -12 197 350 98 16 chr5 22361259 22361382 -177268768 + L2 LINE L2 3140 3272 0 213 289 0 0 chr5 22361733 22361785 -177268365 + (TATG)n Simple_repeat Simple_repeat 4 55 0 570 318 53 0 chr5 22361900 22362089 -177268061 + MIR SINE MIR 18 216 -46 225 65 0 0 chr5 22363619 22363650 -177266500 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 275 250 65 82 chr5 22364048 22364094 -177266056 + L1MC5 LINE L1 7122 7167 -794 1890 145 3 38 chr5 22364094 22364412 -177265738 - AluSq SINE Alu -6 307 1 275 250 65 82 chr5 22364412 22364549 -177265601 + L1MC5 LINE L1 7167 7302 -659 918 252 129 90 chr5 22364610 22365067 -177265083 + MLT1C-int LTR MaLR 876 1350 -21 659 251 81 14 chr5 22365122 22365392 -177264758 + MLT1C LTR MaLR 64 415 -52 250 158 0 0 chr5 22365684 22365722 -177264428 + MLT1C LTR MaLR 427 464 -3 267 327 38 25 chr5 22365887 22366046 -177264104 - MIR SINE MIR -49 213 53 1188 222 177 11 chr5 22366268 22366629 -177263521 + MLT1C LTR MaLR 1 421 -46 2113 115 10 22 chr5 22366968 22367282 -177262868 - AluSq SINE Alu -3 310 1 192 364 18 45 chr5 22367780 22367890 -177262260 - L2 LINE L2 -21 3292 3186 557 336 36 40 chr5 22368284 22368558 -177261592 + HERVL40 LTR ERVL 5254 5526 -4 1544 174 4 8 chr5 22368889 22369154 -177260996 - AluJo SINE Alu -48 264 1 299 213 33 0 chr5 22369170 22369231 -177260919 - HERVL40 LTR ERVL -5450 80 18 960 284 29 75 chr5 22369245 22369727 -177260423 - LTR40a LTR ERVL -2 460 1 2031 368 74 43 chr5 22369729 22371529 -177258621 - HERVL40 LTR ERVL -2094 2902 1048 2521 325 176 29 chr5 22373364 22374511 -177255639 + L2 LINE L2 460 1437 -1877 1981 146 3 0 chr5 22374511 22374812 -177255338 + AluSx SINE Alu 1 302 -10 2521 325 176 29 chr5 22374812 22375648 -177254502 + L2 LINE L2 1437 2734 -580 196 186 23 0 chr5 22375876 22375919 -177254231 + L2 LINE L2 3258 3301 -12 21 57 0 0 chr5 22376500 22376535 -177253615 + AT_rich Low_complexity Low_complexity 1 35 0 675 231 35 35 chr5 22376621 22376820 -177253330 + MER3 DNA MER1_type 10 208 -1 1334 200 79 24 chr5 22377558 22377888 -177252262 + MLT1A1 LTR MaLR 1 348 -17 2092 120 90 0 chr5 22377889 22378223 -177251927 - THE1B LTR MaLR 0 364 1 9229 122 34 47 chr5 22378223 22379825 -177250325 - THE1B-int LTR MaLR 0 1580 1 1989 148 77 3 chr5 22379825 22380164 -177249986 - THE1B LTR MaLR 0 364 1 225 321 0 0 chr5 22381401 22381457 -177248693 + MIR3 SINE MIR 149 204 -4 1591 184 54 64 chr5 22384359 22384751 -177245399 + MLT1B LTR MaLR 1 388 -2 26 0 0 0 chr5 22384827 22384853 -177245297 + AT_rich Low_complexity Low_complexity 1 26 0 227 286 39 0 chr5 22384982 22385059 -177245091 - L1M4 LINE L1 -1998 4148 4069 27 73 0 0 chr5 22385154 22385209 -177244941 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr5 22385652 22385673 -177244477 + AT_rich Low_complexity Low_complexity 1 21 0 201 108 0 0 chr5 22386002 22386039 -177244111 + (TG)n Simple_repeat Simple_repeat 1 37 0 22 56 0 0 chr5 22386469 22386505 -177243645 + AT_rich Low_complexity Low_complexity 1 36 0 1714 123 43 4 chr5 22386651 22386927 -177243223 - L1PA10 LINE L1 -9 6159 5873 24 0 0 0 chr5 22387765 22387789 -177242361 + AT_rich Low_complexity Low_complexity 1 24 0 216 331 48 30 chr5 22388077 22388243 -177241907 + L2 LINE L2 1936 2104 -1210 23 0 0 0 chr5 22389368 22389391 -177240759 + AT_rich Low_complexity Low_complexity 1 23 0 180 111 0 0 chr5 22390279 22390306 -177239844 + (CA)n Simple_repeat Simple_repeat 2 28 0 26 0 0 0 chr5 22390350 22390376 -177239774 + AT_rich Low_complexity Low_complexity 1 26 0 1897 112 114 97 chr5 22390511 22390932 -177239218 + MSTA LTR MaLR 1 428 0 35 63 0 0 chr5 22391452 22391515 -177238635 + AT_rich Low_complexity Low_complexity 1 63 0 26 0 0 0 chr5 22392285 22392311 -177237839 + AT_rich Low_complexity Low_complexity 1 26 0 196 225 0 0 chr5 22393903 22393943 -177236207 - MIR3 SINE MIR -17 191 152 396 291 93 7 chr5 22393997 22394148 -177236002 - MER58A DNA MER1_type 0 164 1 189 107 0 0 chr5 22394358 22394386 -177235764 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 234 0 0 0 chr5 22394386 22394412 -177235738 + (T)n Simple_repeat Simple_repeat 1 26 0 604 114 0 0 chr5 22394442 22394530 -177235620 + AluS SINE Alu 1 88 -225 1317 113 5 10 chr5 22394630 22394834 -177235316 - AluSg SINE Alu -107 203 1 453 331 84 0 chr5 22395942 22396241 -177233909 + L1ME3A LINE L1 4959 5282 -864 684 303 108 32 chr5 22396349 22396841 -177233309 + L1ME3A LINE L1 5440 5968 -202 21 0 0 0 chr5 22397039 22397060 -177233090 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr5 22397278 22397308 -177232842 + AT_rich Low_complexity Low_complexity 1 30 0 689 310 91 60 chr5 22397369 22398010 -177232140 - L2 LINE L2 -15 3298 2603 759 331 92 28 chr5 22398010 22398551 -177231599 - L2 LINE L2 -981 2333 1758 1525 120 178 0 chr5 22398675 22398999 -177231151 + AluSq SINE Alu 1 367 0 687 256 0 0 chr5 22399181 22399341 -177230809 - L1PA16 LINE L1 -7 6159 6000 1027 322 88 23 chr5 22399382 22399997 -177230153 - L2 LINE L2 -1786 1528 874 225 294 29 49 chr5 22401673 22401775 -177228375 + MIR SINE MIR 41 140 -68 180 0 0 0 chr5 22401814 22401834 -177228316 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 27 29 0 0 chr5 22402190 22402224 -177227926 + AT_rich Low_complexity Low_complexity 1 34 0 1799 72 19 26 chr5 22402227 22402491 -177227659 - L1PB1 LINE L1 -9 6142 5881 1958 131 17 0 chr5 22402491 22402781 -177227369 - AluSx SINE Alu -17 295 1 2172 104 13 3 chr5 22403373 22403671 -177226479 - AluSq SINE Alu -12 301 1 191 267 109 103 chr5 22404262 22404427 -177225723 + MIR3 SINE MIR 18 183 -25 2100 125 0 0 chr5 22404490 22404778 -177225372 - AluSx SINE Alu -24 288 1 243 274 10 69 chr5 22404810 22404912 -177225238 + MER58C DNA MER1_type 120 215 0 1644 229 20 0 chr5 22406051 22406409 -177223741 - MLT1A1 LTR MaLR 0 365 1 2281 139 5 83 chr5 22407027 22407473 -177222677 + MLT2D LTR ERVL 1 411 -3 2306 89 0 0 chr5 22407597 22407890 -177222260 + AluY SINE Alu 1 293 -18 2124 221 16 0 chr5 22408634 22409083 -177221067 + MER74C LTR ERVL 5 460 0 393 346 60 41 chr5 22409594 22410007 -177220143 + L1ME1 LINE L1 26 446 -5624 467 286 62 50 chr5 22410056 22410814 -177219336 + L1ME1 LINE L1 525 1272 -4808 207 0 0 0 chr5 22410814 22410837 -177219313 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 467 286 62 50 chr5 22410837 22411072 -177219078 + L1ME1 LINE L1 1272 1503 -4577 669 252 87 0 chr5 22411081 22411323 -177218827 + L1ME1 LINE L1 4715 4977 -1103 1957 264 67 18 chr5 22411325 22412263 -177217887 + L1ME1 LINE L1 5022 6012 -88 309 309 70 30 chr5 22412417 22412647 -177217503 + L1ME LINE L1 2960 3198 -2882 485 228 16 0 chr5 22413714 22413841 -177216309 - L1MB4 LINE L1 0 6180 6052 21 0 0 0 chr5 22414249 22414270 -177215880 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 22414578 22414607 -177215543 + AT_rich Low_complexity Low_complexity 1 29 0 2065 115 7 0 chr5 22414766 22415049 -177215101 + AluSx SINE Alu 1 286 -22 620 62 21 0 chr5 22415049 22415146 -177215004 + (TATAA)n Simple_repeat Simple_repeat 4 102 0 228 222 0 19 chr5 22415334 22415388 -177214762 - LTR33A LTR ERVL -20 503 451 229 359 26 34 chr5 22415615 22415732 -177214418 - MLT2E LTR ERVL -481 147 32 217 222 0 0 chr5 22416634 22416679 -177213471 + (TG)n Simple_repeat Simple_repeat 2 46 0 217 222 0 0 chr5 22417713 22417758 -177212392 + (TG)n Simple_repeat Simple_repeat 2 46 0 255 240 62 47 chr5 22418136 22418265 -177211885 - LTR16A LTR ERVL -18 432 302 2439 206 42 4 chr5 22418334 22418815 -177211335 + MER68 LTR ERV1 55 553 -9 1797 141 10 33 chr5 22418979 22419283 -177210867 + AluSq SINE Alu 1 297 -16 352 361 73 55 chr5 22419813 22419947 -177210203 - HERV16 LTR ERVL -765 4999 4869 2259 88 0 3 chr5 22419947 22420243 -177209907 + AluY SINE Alu 1 295 -16 352 361 73 55 chr5 22420243 22420584 -177209566 - HERV16 LTR ERVL -895 4869 4504 2038 127 0 25 chr5 22420584 22420900 -177209250 + AluSg SINE Alu 1 308 -2 352 361 73 55 chr5 22420900 22421145 -177209005 - HERV16 LTR ERVL -1260 4504 4265 413 328 34 21 chr5 22421330 22421565 -177208585 - HERV16 LTR ERVL -1672 3982 3745 298 341 90 0 chr5 22421790 22422132 -177208018 - HERV16 LTR ERVL -2333 3321 2938 789 213 87 43 chr5 22422561 22422768 -177207382 + MER20 DNA MER1_type 1 216 -3 263 297 20 20 chr5 22422820 22422921 -177207229 - HERV16 LTR ERVL -4440 556 456 245 284 37 37 chr5 22423222 22423331 -177206819 - LTR16A1 LTR ERVL -348 109 1 28 0 0 0 chr5 22423423 22423451 -177206699 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 22423881 22423905 -177206245 + AT_rich Low_complexity Low_complexity 1 24 0 547 143 58 209 chr5 22424483 22424741 -177205409 + MER20 DNA MER1_type 1 219 0 22 35 0 0 chr5 22425025 22425054 -177205096 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr5 22425872 22425899 -177204251 + AT_rich Low_complexity Low_complexity 1 27 0 252 220 34 0 chr5 22426141 22426200 -177203950 + MLT1L LTR MaLR 549 609 -6 339 318 109 25 chr5 22427093 22427376 -177202774 - HERV16 LTR ERVL -2154 3331 3025 2229 112 49 27 chr5 22427378 22427745 -177202405 - THE1C LTR MaLR 0 375 1 911 360 72 26 chr5 22427796 22428383 -177201767 + L3 LINE CR1 521 1134 -443 27 29 0 0 chr5 22428410 22428444 -177201706 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr5 22428566 22428594 -177201556 + AT_rich Low_complexity Low_complexity 1 28 0 638 328 26 15 chr5 22428617 22428888 -177201262 - LTR16B LTR ERVL 0 464 191 2126 112 3 16 chr5 22428909 22429212 -177200938 + AluSg SINE Alu 2 300 -10 228 418 29 22 chr5 22429549 22429822 -177200328 - LTR16B LTR ERVL -144 320 46 23 0 0 0 chr5 22430425 22430448 -177199702 + AT_rich Low_complexity Low_complexity 1 23 0 580 319 120 3 chr5 22430556 22430857 -177199293 - HERV16 LTR ERVL -1064 4700 4365 709 347 43 27 chr5 22431924 22432310 -177197840 - HERV16 LTR ERVL -1910 3086 2736 2204 181 124 46 chr5 22432311 22432913 -177197237 - LTR48B LTR ERV1 0 787 4 964 302 66 67 chr5 22433033 22433821 -177196329 - HERV16 LTR ERVL -2613 2383 1597 706 313 80 39 chr5 22433942 22434332 -177195818 - HERV16 LTR ERVL -3608 1388 983 546 303 70 95 chr5 22434355 22434740 -177195410 - MER77 LTR ERV1 -27 578 336 2538 46 20 0 chr5 22434740 22435045 -177195105 - AluY SINE Alu 0 311 1 546 303 70 95 chr5 22435045 22435322 -177194828 - MER77 LTR ERV1 -269 336 54 1841 70 12 0 chr5 22435751 22435994 -177194156 + L1PA7 LINE L1 5908 6153 -1 1198 172 19 94 chr5 22436149 22436468 -177193682 - AluJb SINE Alu -7 295 1 1532 184 35 49 chr5 22436577 22436925 -177193225 - MER7A DNA MER2_type -4 342 2 484 316 92 10 chr5 22436974 22437170 -177192980 + MIR SINE MIR 21 232 -30 302 260 87 31 chr5 22438128 22438255 -177191895 + L1MCa LINE L1 66 199 -6227 208 320 10 10 chr5 22438696 22438799 -177191351 + (TATG)n Simple_repeat Simple_repeat 2 104 0 247 256 11 22 chr5 22439119 22439209 -177190941 - L1ME LINE L1 -536 5585 5497 23 0 0 0 chr5 22439585 22439608 -177190542 + AT_rich Low_complexity Low_complexity 1 23 0 220 197 92 53 chr5 22440233 22440309 -177189841 - MIR3 SINE MIR -22 186 108 2115 126 3 0 chr5 22440349 22440643 -177189507 + AluSx SINE Alu 3 297 -15 189 74 0 0 chr5 22440978 22441005 -177189145 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2635 107 0 10 chr5 22441348 22441740 -177188410 + L1PA13 LINE L1 5772 6159 -4 1634 227 76 56 chr5 22443375 22443873 -177186277 - MLT2B1 LTR ERVL -8 512 5 4069 185 37 13 chr5 22443903 22444683 -177185467 - ERVL-B1 LTR ERVL -242 5522 4724 267 269 0 15 chr5 22444687 22444754 -177185396 - MER2 DNA MER2_type 0 345 280 1071 225 5 0 chr5 22444792 22445001 -177185149 - MER2 DNA MER2_type -135 210 1 4228 228 50 21 chr5 22445019 22445530 -177184620 - HERV16 LTR ERVL -3466 2298 1804 189 0 0 0 chr5 22445530 22445551 -177184599 + (TC)n Simple_repeat Simple_repeat 2 22 0 4228 228 50 21 chr5 22445551 22446141 -177184009 - HERV16 LTR ERVL -3960 1804 1128 1515 124 128 22 chr5 22446141 22446415 -177183735 - L1P4 LINE L1 -437 5729 5427 2246 142 8 13 chr5 22446415 22446795 -177183355 + L1PA16 LINE L1 5787 6164 -2 720 146 8 0 chr5 22446805 22446928 -177183222 - HERV16 LTR ERVL -4627 1137 1014 * 2484 253 43 30 chr5 22446927 22447595 -177182555 - HERV16 LTR ERVL -4877 887 211 1014 214 60 0 chr5 22447596 22447635 -177182515 + AluSg/x SINE Alu 82 117 -193 243 0 0 0 chr5 22447635 22447662 -177182488 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1014 214 60 0 chr5 22447662 22447823 -177182327 + AluSg/x SINE Alu 117 294 -16 920 325 64 9 chr5 22448445 22448869 -177181281 + LTR16A LTR ERVL 1 447 -3 240 226 16 0 chr5 22448874 22448936 -177181214 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 312 321 76 8 chr5 22449053 22449184 -177180966 + MIR SINE MIR 53 192 -70 11435 210 47 32 chr5 22449211 22452885 -177177265 + L1MA4A LINE L1 1 3616 -3749 1703 177 0 3 chr5 22452885 22453167 -177176983 + AluJo SINE Alu 7 287 -25 224 29 0 29 chr5 22453170 22453204 -177176946 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 11435 210 47 32 chr5 22453204 22456505 -177173645 + L1MA4A LINE L1 3617 7361 -4 29 28 0 0 chr5 22458088 22458124 -177172026 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 22458164 22458186 -177171964 + AT_rich Low_complexity Low_complexity 1 22 0 676 295 24 9 chr5 22458186 22458396 -177171754 - MER20 DNA MER1_type 0 219 7 29 47 0 0 chr5 22458428 22458471 -177171679 + AT_rich Low_complexity Low_complexity 1 43 0 320 322 60 0 chr5 22458694 22458877 -177171273 - L1M4 LINE L1 -3156 2990 2797 26 30 0 0 chr5 22458877 22458910 -177171240 + AT_rich Low_complexity Low_complexity 1 33 0 327 278 142 13 chr5 22458929 22459231 -177170919 - L1M4 LINE L1 -3614 2532 2192 328 158 12 12 chr5 22459264 22459346 -177170804 + (TA)n Simple_repeat Simple_repeat 1 82 0 25 0 0 0 chr5 22459634 22459659 -177170491 + AT_rich Low_complexity Low_complexity 1 25 0 2681 226 46 8 chr5 22459864 22460493 -177169657 + MLT-int LTR MaLR 5 657 -1078 299 169 31 31 chr5 22460636 22460701 -177169449 + MLT-int LTR MaLR 677 741 -994 890 162 94 26 chr5 22460729 22460920 -177169230 - MSTA LTR MaLR -131 297 94 21 0 0 0 chr5 22461113 22461134 -177169016 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr5 22461613 22461646 -177168504 + AT_rich Low_complexity Low_complexity 1 33 0 1308 164 4 0 chr5 22462273 22462511 -177167639 + L1PA14 LINE L1 5923 6161 0 892 252 39 25 chr5 22463629 22463915 -177166235 - MLT1A1 LTR MaLR -75 290 1 1266 205 48 44 chr5 22464334 22464627 -177165523 + MLT2B1 LTR ERVL 1 294 -226 350 323 0 0 chr5 22465312 22465408 -177164742 + L2 LINE L2 3217 3312 -1 201 365 8 0 chr5 22465498 22465587 -177164563 - MIR SINE MIR -61 147 89 3444 125 2 4 chr5 22466789 22467293 -177162857 - MER9 LTR ERVK -8 503 1 3025 166 59 16 chr5 22467792 22468432 -177161718 - MER41-int LTR ERV1 -3922 3894 3227 * 3221 143 18 31 chr5 22468425 22468971 -177161179 - MER41-int LTR ERV1 -5351 595 57 872 193 28 0 chr5 22471669 22471845 -177158305 - L1PBa LINE L1 -6682 181 1 32 67 0 0 chr5 22472537 22472597 -177157553 + AT_rich Low_complexity Low_complexity 1 60 0 21 36 0 0 chr5 22472844 22472872 -177157278 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 22473481 22473510 -177156640 + AT_rich Low_complexity Low_complexity 1 29 0 304 242 0 0 chr5 22475026 22475092 -177155058 + MLT1F1 LTR MaLR 59 124 -443 2230 209 45 25 chr5 22475099 22475658 -177154492 + L1MC3 LINE L1 7196 7765 -20 196 197 16 16 chr5 22477563 22477624 -177152526 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 1816 128 51 65 chr5 22477629 22477982 -177152168 + THE1C LTR MaLR 28 375 0 354 123 0 0 chr5 22477984 22478041 -177152109 + (TA)n Simple_repeat Simple_repeat 2 58 0 617 327 73 20 chr5 22478449 22478697 -177151453 + LTR16C LTR ERVL 171 431 -60 274 354 9 9 chr5 22479067 22479180 -177150970 + MLT2E LTR ERVL 47 159 -469 1458 72 25 130 chr5 22479636 22479912 -177150238 + AluYb8 SINE Alu 61 307 -11 2237 177 24 5 chr5 22479937 22480361 -177149789 + MSTB1 LTR MaLR 1 432 0 2840 220 69 3 chr5 22480361 22481012 -177149138 + MSTB1-int LTR MaLR 1 694 -957 308 265 41 10 chr5 22481113 22481211 -177148939 + L1MC2 LINE L1 6229 6329 -15 204 179 0 0 chr5 22481223 22481262 -177148888 + A-rich Low_complexity Low_complexity 1 39 0 290 326 35 47 chr5 22481477 22481649 -177148501 + L1MCc LINE L1 259 428 -5995 856 76 0 8 chr5 22481741 22481859 -177148291 - AluSp/q SINE Alu -9 304 188 216 0 0 0 chr5 22481952 22481976 -177148174 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 291 337 0 0 chr5 22482038 22482124 -177148026 + L1MCc LINE L1 824 909 -5514 1130 255 85 46 chr5 22482969 22483428 -177146722 - MLT1D LTR MaLR -3 502 26 261 57 0 0 chr5 22484446 22484481 -177145669 + (A)n Simple_repeat Simple_repeat 1 35 0 1022 183 0 7 chr5 22484481 22484673 -177145477 - MER66-int LTR ERV1 -4503 2173 1733 1165 237 40 23 chr5 22484679 22485044 -177145106 - MER66A LTR ERV1 -19 459 169 1958 144 26 7 chr5 22485131 22485437 -177144713 - AluSx SINE Alu 0 312 1 326 197 26 0 chr5 22485490 22485566 -177144584 + MER67D LTR ERV1 432 509 -5 23 0 0 0 chr5 22486229 22486252 -177143898 + AT_rich Low_complexity Low_complexity 1 23 0 741 267 169 73 chr5 22486897 22487102 -177143048 + MLT1E1 LTR MaLR 19 203 -451 1292 238 3 10 chr5 22487102 22487401 -177142749 + AluJb SINE Alu 1 297 -15 741 267 169 73 chr5 22487401 22487674 -177142476 + MLT1E1 LTR MaLR 203 543 -111 264 167 0 0 chr5 22489151 22489193 -177140957 + MLT1A1 LTR MaLR 5 46 -328 234 0 0 0 chr5 22489251 22489277 -177140873 + (ATG)n Simple_repeat Simple_repeat 2 27 0 216 0 0 0 chr5 22489277 22489301 -177140849 + (TTA)n Simple_repeat Simple_repeat 3 26 0 3116 31 0 3 chr5 22489309 22489693 -177140457 + L1P LINE L1 3635 4017 -2129 388 165 35 0 chr5 22489681 22489766 -177140384 - L1MA3 LINE L1 -179 6126 6039 * 1060 149 0 0 chr5 22489766 22489941 -177140209 + L1MA3 LINE L1 6125 6305 0 1268 264 32 5 chr5 22489942 22490257 -177139893 + MLT1A1 LTR MaLR 37 361 -4 21 36 0 0 chr5 22490762 22490790 -177139360 + AT_rich Low_complexity Low_complexity 1 28 0 24 77 0 0 chr5 22491611 22491663 -177138487 + AT_rich Low_complexity Low_complexity 1 52 0 37 52 0 0 chr5 22491709 22491767 -177138383 + AT_rich Low_complexity Low_complexity 1 58 0 667 219 0 0 chr5 22491819 22491956 -177138194 - MSTC LTR MaLR 0 428 292 1698 94 0 55 chr5 22492482 22492736 -177137414 - AluSg SINE Alu -21 289 50 299 160 42 34 chr5 22494695 22494814 -177135336 + (TTATA)n Simple_repeat Simple_repeat 5 124 0 353 57 95 25 chr5 22494817 22494833 -177135317 + (TA)n Simple_repeat Simple_repeat 2 15 -155 2644 41 0 0 chr5 22494833 22495150 -177135000 - AluYb8 SINE Alu -1 317 1 353 57 95 25 chr5 22495150 22495291 -177134859 + (TA)n Simple_repeat Simple_repeat 15 170 0 25 31 0 0 chr5 22495329 22495361 -177134789 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 22495555 22495577 -177134573 + AT_rich Low_complexity Low_complexity 1 22 0 615 260 86 32 chr5 22496461 22496855 -177133295 - MSTD LTR MaLR 0 396 3 200 250 0 0 chr5 22496934 22496974 -177133176 + MER5A DNA MER1_type 10 49 -140 22 0 0 0 chr5 22497873 22497895 -177132255 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 22498097 22498118 -177132032 + AT_rich Low_complexity Low_complexity 1 21 0 328 294 110 48 chr5 22498722 22498868 -177131282 - L2 LINE L2 -1 3271 3117 339 192 222 20 chr5 22499303 22499402 -177130748 - L2 LINE L2 -5 3308 3190 1767 111 0 4 chr5 22500270 22500531 -177129619 + L1PB1 LINE L1 5892 6151 0 21 0 0 0 chr5 22501199 22501220 -177128930 + AT_rich Low_complexity Low_complexity 1 21 0 224 328 0 30 chr5 22501246 22501313 -177128837 + L2 LINE L2 3234 3298 -15 337 279 79 63 chr5 22501551 22501805 -177128345 - L1MC/D LINE L1 -2294 5514 5257 351 0 0 0 chr5 22503284 22503323 -177126827 + (TG)n Simple_repeat Simple_repeat 1 39 0 309 26 0 0 chr5 22503322 22503360 -177126790 + (GA)n Simple_repeat Simple_repeat 1 38 0 * 1997 147 0 0 chr5 22503995 22504281 -177125869 + AluSx SINE Alu 1 286 -26 25 0 0 0 chr5 22505405 22505430 -177124720 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr5 22507994 22508023 -177122127 + AT_rich Low_complexity Low_complexity 1 29 0 31 26 0 0 chr5 22508078 22508116 -177122034 + AT_rich Low_complexity Low_complexity 1 38 0 1160 66 0 6 chr5 22509315 22509481 -177120669 - L1P LINE L1 -745 5427 5263 210 171 0 0 chr5 22510024 22510059 -177120091 + (TA)n Simple_repeat Simple_repeat 2 36 0 2318 85 0 16 chr5 22510081 22510388 -177119762 - AluSx SINE Alu -10 302 1 600 277 36 43 chr5 22510762 22511015 -177119135 + MER4B-int LTR ERV1 4101 4351 -2407 1597 235 27 10 chr5 22511168 22511576 -177118574 - MLT1C-int LTR MaLR -938 433 19 1062 240 146 21 chr5 22511581 22511965 -177118185 - MLT1C LTR MaLR -30 437 6 1533 216 62 10 chr5 22513488 22513904 -177116246 + L1MC4a LINE L1 7181 7618 -190 230 304 83 0 chr5 22513960 22514128 -177116022 + L1MC4a LINE L1 7627 7808 0 300 120 0 0 chr5 22514409 22514459 -177115691 + (TG)n Simple_repeat Simple_repeat 2 51 0 289 247 17 15 chr5 22514459 22514581 -177115569 + L1MC4 LINE L1 7701 8042 0 2400 186 14 10 chr5 22515028 22515851 -177114299 - L1PA16 LINE L1 -540 5626 4806 1078 197 14 14 chr5 22515854 22516067 -177114083 + L1PA16 LINE L1 5647 5859 -307 771 90 23 45 chr5 22516070 22516203 -177113947 + L1PA16 LINE L1 6037 6166 0 21 0 0 0 chr5 22516664 22516685 -177113465 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 22517337 22517360 -177112790 + AT_rich Low_complexity Low_complexity 1 23 0 956 128 14 0 chr5 22517366 22517514 -177112636 - AluSc SINE Alu -4 305 156 408 145 41 0 chr5 22517536 22517620 -177112530 + L1P4 LINE L1 5452 5547 -618 189 0 0 0 chr5 22518480 22518501 -177111649 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2262 69 0 3 chr5 22518508 22518797 -177111353 - AluY SINE Alu -23 288 1 1652 275 69 36 chr5 22519334 22519669 -177110481 - MLT1E2 LTR MaLR 0 626 263 2311 58 0 67 chr5 22519669 22519997 -177110153 - AluY SINE Alu -4 307 2 1652 275 69 36 chr5 22519997 22520243 -177109907 - MLT1E2 LTR MaLR -363 263 26 1856 234 53 40 chr5 22520620 22520995 -177109155 - LTR53 LTR ERVL 0 519 134 2081 108 24 0 chr5 22520995 22521292 -177108858 + AluSq SINE Alu 1 304 -9 1856 234 53 40 chr5 22521292 22521421 -177108729 - LTR53 LTR ERVL -385 134 8 324 65 0 0 chr5 22521482 22521528 -177108622 + MADE1 DNA Mariner 1 46 -34 294 408 26 64 chr5 22521554 22521603 -177108547 - L2 LINE L2 -248 3065 3016 4129 146 12 1 chr5 22521603 22522274 -177107876 - L1PA15 LINE L1 0 6165 5488 294 408 26 64 chr5 22522274 22522601 -177107549 - L2 LINE L2 -297 3016 2700 854 217 12 0 chr5 22522915 22523076 -177107074 - FRAM SINE Alu -14 162 1 193 284 52 69 chr5 22523799 22523915 -177106235 - MER5A DNA MER1_type -6 183 70 342 237 52 30 chr5 22524648 22524783 -177105367 + L1M4 LINE L1 3312 3449 -2697 1426 225 74 64 chr5 22524788 22525290 -177104860 + MER76 LTR ERV 35 541 -147 1472 173 54 26 chr5 22525290 22525845 -177104305 + L1MC3 LINE L1 7077 7783 -2 2981 196 5 32 chr5 22526450 22526496 -177103654 - L1MB5 LINE L1 -27 6147 6101 2307 97 3 0 chr5 22526496 22526794 -177103356 + AluSp SINE Alu 1 299 -14 2981 196 5 32 chr5 22526794 22527376 -177102774 - L1MB5 LINE L1 -73 6101 5536 188 211 154 0 chr5 22527536 22527588 -177102562 + MIR SINE MIR 109 168 -94 263 357 100 21 chr5 22527861 22528200 -177101950 + L2 LINE L2 2217 2582 -732 403 203 38 0 chr5 22528274 22528353 -177101797 + MER69 DNA AcHobo 1 82 -2444 420 261 0 0 chr5 22528506 22528598 -177101552 + MER69 DNA AcHobo 2435 2526 0 2659 174 8 63 chr5 22528728 22529111 -177101039 - MER41C LTR ERV1 0 554 212 2234 127 0 0 chr5 22529111 22529410 -177100740 + AluSx SINE Alu 3 301 -11 2659 174 8 63 chr5 22529410 22529612 -177100538 - MER41C LTR ERV1 -342 212 1 6907 255 89 49 chr5 22529732 22530201 -177099949 - L1MC3 LINE L1 -1 8064 7615 1501 201 82 37 chr5 22530201 22530580 -177099570 + MSTD LTR MaLR 1 396 0 6907 255 89 49 chr5 22530580 22531220 -177098930 - L1MC3 LINE L1 -450 7615 7002 204 40 0 0 chr5 22531220 22531245 -177098905 + (CA)n Simple_repeat Simple_repeat 2 26 0 6907 255 89 49 chr5 22531245 22532975 -177097175 - L1MC3 LINE L1 -1063 7002 5052 1883 144 45 28 chr5 22532975 22533330 -177096820 + THE1B LTR MaLR 1 361 -3 6907 255 89 49 chr5 22533330 22534058 -177096092 - L1MC3 LINE L1 -3013 5052 4355 1112 221 107 56 chr5 22534062 22534497 -177095653 + MLT2B1 LTR ERVL 1 512 -8 1774 268 112 42 chr5 22534543 22536182 -177093968 - L1MC3 LINE L1 -3116 3310 1316 318 26 0 0 chr5 22536182 22536221 -177093929 + (TG)n Simple_repeat Simple_repeat 2 40 0 1774 268 112 42 chr5 22536221 22536794 -177093356 - L1MC3 LINE L1 -5110 1316 784 190 325 92 33 chr5 22536801 22536921 -177093229 + L2 LINE L2 2292 2418 -896 2184 109 0 0 chr5 22537207 22537510 -177092640 + AluSc SINE Alu 1 303 -6 181 385 13 13 chr5 22538052 22538130 -177092020 - L2 LINE L2 0 3272 3195 699 158 108 0 chr5 22539064 22539203 -177090947 + AluSg1 SINE Alu 3 156 -153 201 133 0 0 chr5 22540007 22540037 -177090113 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 384 193 151 82 chr5 22541767 22542134 -177088016 - MLT1H LTR MaLR -4 563 152 249 169 17 51 chr5 22542178 22542237 -177087913 - MLT1H LTR MaLR -391 158 102 1165 121 0 0 chr5 22545072 22545229 -177084921 + AluSg1 SINE Alu 131 287 -25 24 0 0 0 chr5 22545250 22545274 -177084876 + AT_rich Low_complexity Low_complexity 1 24 0 657 123 47 0 chr5 22545274 22545380 -177084770 - HY1 scRNA scRNA -1 111 1 22 35 0 0 chr5 22545420 22545449 -177084701 + AT_rich Low_complexity Low_complexity 1 29 0 6223 90 1 6 chr5 22545670 22546540 -177083610 - L1P LINE L1 -1242 4904 4039 438 168 30 20 chr5 22547621 22547722 -177082428 - L1ME3A LINE L1 -182 5988 5887 22 0 0 0 chr5 22547864 22547886 -177082264 + AT_rich Low_complexity Low_complexity 1 22 0 233 169 92 31 chr5 22547912 22547977 -177082173 + MLT1I LTR MaLR 318 386 -23 232 280 13 0 chr5 22548008 22548083 -177082067 - L1MEc LINE L1 -3806 2576 2501 347 303 93 47 chr5 22548471 22549144 -177081006 - L1MEc LINE L1 -4671 1713 1013 1447 210 17 0 chr5 22549227 22549518 -177080632 + AluJb SINE Alu 1 296 -16 1801 281 71 26 chr5 22549598 22550030 -177080120 - L1ME1 LINE L1 -5 6161 5750 1470 222 48 16 chr5 22550030 22550408 -177079742 - MLT1B LTR MaLR 0 390 1 1801 281 71 26 chr5 22550408 22551626 -177078524 - L1ME1 LINE L1 -416 5750 4441 22 35 0 0 chr5 22551772 22551801 -177078349 + AT_rich Low_complexity Low_complexity 1 29 0 204 163 23 0 chr5 22554128 22554171 -177075979 + (TA)n Simple_repeat Simple_repeat 2 45 0 1717 160 0 22 chr5 22554543 22554862 -177075288 + AluSx SINE Alu 1 312 0 1919 116 27 3 chr5 22555151 22555452 -177074698 + AluSq SINE Alu 3 310 -3 342 0 0 0 chr5 22555708 22555746 -177074404 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1910 121 0 0 chr5 22556002 22556294 -177073856 + AluSq SINE Alu 21 312 0 28 48 0 0 chr5 22556976 22557018 -177073132 + AT_rich Low_complexity Low_complexity 1 42 0 180 368 81 0 chr5 22557022 22557109 -177073041 - MIR3 SINE MIR -28 180 87 748 155 13 2 chr5 22557109 22557263 -177072887 - MLT1A1 LTR MaLR -2 363 236 357 182 20 81 chr5 22557272 22557371 -177072779 - MLT1A1 LTR MaLR -266 99 7 1337 216 68 60 chr5 22557563 22558064 -177072086 + MLT1D LTR MaLR 1 505 0 32 67 0 0 chr5 22558524 22558584 -177071566 + AT_rich Low_complexity Low_complexity 1 60 0 261 350 88 8 chr5 22559642 22559882 -177070268 + MIR SINE MIR 3 261 -1 27 29 0 0 chr5 22559965 22559999 -177070151 + AT_rich Low_complexity Low_complexity 1 34 0 24492 150 15 14 chr5 22561299 22563895 -177066255 - L1PA8A LINE L1 -1 6445 3854 207 0 0 0 chr5 22563895 22563918 -177066232 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 24492 150 15 14 chr5 22563918 22567688 -177062462 - L1PA8A LINE L1 -2592 3854 4 1837 166 0 0 chr5 22567865 22568172 -177061978 - AluSx SINE Alu -5 307 1 1420 130 0 14 chr5 22568209 22568424 -177061726 + AluSx SINE Alu 5 216 -96 239 220 40 20 chr5 22570355 22570455 -177059695 + (TA)n Simple_repeat Simple_repeat 2 103 0 1045 241 120 35 chr5 22570615 22570931 -177059219 - MLT1A2 LTR MaLR -31 343 1 180 302 128 12 chr5 22571023 22571109 -177059041 + L2 LINE L2 2111 2206 -1108 204 370 77 6 chr5 22571210 22571391 -177058759 + L2 LINE L2 3120 3313 0 347 290 161 14 chr5 22571538 22571755 -177058395 + MER110 LTR ERV1 91 339 -152 2959 127 33 0 chr5 22571758 22572207 -177057943 + MER1A DNA MER1_type 66 529 0 305 279 130 13 chr5 22572221 22572375 -177057775 + MER110 LTR ERV1 320 491 0 469 251 95 56 chr5 22573134 22573365 -177056785 - MER68 LTR ERV1 -77 485 246 1716 173 3 14 chr5 22574355 22574650 -177055500 - AluJb SINE Alu 0 312 21 25 51 0 0 chr5 22575299 22575338 -177054812 + AT_rich Low_complexity Low_complexity 1 39 0 947 206 27 38 chr5 22575874 22575940 -177054210 - L1MC3 LINE L1 -21 7764 7699 2508 113 22 8 chr5 22575940 22576310 -177053840 + THE1C LTR MaLR 1 375 0 947 206 27 38 chr5 22576310 22576505 -177053645 - L1MC3 LINE L1 -86 7699 7506 605 247 48 12 chr5 22577123 22577289 -177052861 - MIR SINE MIR -2 260 89 1140 160 52 5 chr5 22577380 22577593 -177052557 + MER39 LTR ERV1 485 707 0 240 174 0 22 chr5 22577624 22577670 -177052480 + MER39 LTR ERV1 660 704 -3 2131 127 135 5 chr5 22578086 22578465 -177051685 - MSTA LTR MaLR 0 428 1 966 242 29 6 chr5 22578769 22579083 -177051067 - MER33 DNA MER1_type 0 324 4 405 279 0 36 chr5 22579102 22579213 -177050937 + MER5A DNA MER1_type 9 115 -74 181 291 18 0 chr5 22579191 22579246 -177050904 - MER5B DNA MER1_type -121 57 2 * 203 244 0 0 chr5 22579496 22579541 -177050609 + (TG)n Simple_repeat Simple_repeat 2 46 0 242 407 0 9 chr5 22580067 22580175 -177049975 + MIR SINE MIR 6 112 -150 3368 116 16 4 chr5 22580207 22580708 -177049442 - MER84 LTR ERV1 0 507 1 225 94 0 0 chr5 22580967 22580999 -177049151 + (CAT)n Simple_repeat Simple_repeat 1 32 0 1326 99 6 0 chr5 22581059 22581231 -177048919 - AluSp SINE Alu -17 296 124 194 300 170 0 chr5 22581243 22581343 -177048807 - MIR SINE MIR -81 181 65 1774 169 24 71 chr5 22581610 22582019 -177048131 + MLT1B LTR MaLR 1 390 0 376 133 0 17 chr5 22582158 22582218 -177047932 - Tigger5 DNA MER2_type 0 2323 2265 369 109 0 0 chr5 22582417 22582472 -177047678 + (TAA)n Simple_repeat Simple_repeat 1 55 0 839 304 124 13 chr5 22583365 22583760 -177046390 + MER110-int LTR ERV1 4177 4615 -32 826 274 46 69 chr5 22583948 22584338 -177045812 + MER110 LTR ERV1 103 483 -8 23 33 0 0 chr5 22585682 22585712 -177044438 + AT_rich Low_complexity Low_complexity 1 30 0 390 42 0 0 chr5 22585922 22585970 -177044180 + (TG)n Simple_repeat Simple_repeat 1 48 0 214 244 0 0 chr5 22585970 22586011 -177044139 + polypurine Low_complexity Low_complexity 2 42 0 1472 185 10 49 chr5 22586069 22586377 -177043773 + AluJo SINE Alu 12 307 -5 24 77 0 0 chr5 22586482 22586534 -177043616 + AT_rich Low_complexity Low_complexity 1 52 0 2432 54 0 3 chr5 22587568 22587866 -177042284 - AluY SINE Alu -1 310 14 2692 136 17 110 chr5 22589039 22589620 -177040530 + MER1A DNA MER1_type 1 527 0 1372 196 91 95 chr5 22589672 22590112 -177040038 + MER34B LTR ERV1 35 475 -90 2265 102 3 0 chr5 22590112 22590416 -177039734 + AluSc SINE Alu 1 305 -4 1372 196 91 95 chr5 22590416 22590499 -177039651 + MER34B LTR ERV1 475 510 -55 3341 229 47 33 chr5 22590499 22590891 -177039259 - MER21B LTR ERV1 -3 860 475 1518 187 0 28 chr5 22590891 22591175 -177038975 - AluJo SINE Alu -31 281 6 3341 229 47 33 chr5 22591175 22591630 -177038520 - MER21B LTR ERV1 -388 475 1 1372 196 91 95 chr5 22591630 22591685 -177038465 + MER34B LTR ERV1 510 564 -1 1042 248 63 27 chr5 22591697 22591996 -177038154 + MLT1E LTR MaLR 284 593 0 426 255 38 118 chr5 22592365 22592628 -177037522 - MIR SINE MIR 0 262 21 25 31 0 0 chr5 22593495 22593527 -177036623 + AT_rich Low_complexity Low_complexity 1 32 0 5536 121 18 1 chr5 22593527 22594365 -177035785 - L1PA10 LINE L1 -11 7595 6744 2306 161 3 0 chr5 22594368 22594734 -177035416 - THE1C LTR MaLR -8 367 1 16137 188 12 30 chr5 22594736 22596359 -177033791 - L1PA10 LINE L1 -841 6743 5092 2156 92 0 7 chr5 22596359 22596669 -177033481 - AluY SINE Alu 0 308 1 16137 188 12 30 chr5 22596669 22600588 -177029562 - L1PA10 LINE L1 -2492 5092 11 387 286 34 20 chr5 22601411 22601558 -177028592 + MIR SINE MIR 103 251 -11 258 161 0 18 chr5 22601662 22601718 -177028432 - L1PA12 LINE L1 -2 6166 6112 1877 145 35 29 chr5 22601719 22602029 -177028121 - AluSx SINE Alu 0 312 1 2205 109 0 7 chr5 22602928 22603231 -177026919 - AluSq SINE Alu -12 301 1 310 243 148 33 chr5 22604275 22604485 -177025665 - L1M2 LINE L1 -3783 2432 2199 266 255 130 57 chr5 22604947 22605315 -177024835 - L1M2 LINE L1 -4284 1932 1389 279 0 0 0 chr5 22605335 22605366 -177024784 + (TG)n Simple_repeat Simple_repeat 2 32 0 871 197 5 30 chr5 22605949 22606147 -177024003 + L1PB1 LINE L1 3 195 -6668 * 10597 113 113 10 chr5 22606132 22607932 -177022218 + L1PB1 LINE L1 620 2604 -4259 * 12378 201 26 33 chr5 22607930 22610295 -177019855 + L1PB1 LINE L1 2808 5129 -1738 2196 114 3 0 chr5 22610295 22610593 -177019557 + AluSp SINE Alu 1 299 -14 12378 201 26 33 chr5 22610593 22612317 -177017833 + L1PB1 LINE L1 5129 6865 -2 397 327 31 75 chr5 22613568 22613822 -177016328 + MIR SINE MIR 2 244 -18 205 343 86 23 chr5 22613964 22614139 -177016011 + MIR SINE MIR 29 214 -48 1169 235 7 39 chr5 22614546 22614827 -177015323 + MSTD LTR MaLR 117 388 -8 50 42 0 0 chr5 22614988 22615059 -177015091 + AT_rich Low_complexity Low_complexity 1 71 0 319 358 91 11 chr5 22615216 22615403 -177014747 + MIR SINE MIR 56 257 -5 36 70 0 0 chr5 22615409 22615480 -177014670 + AT_rich Low_complexity Low_complexity 1 71 0 25 65 0 0 chr5 22617274 22617320 -177012830 + AT_rich Low_complexity Low_complexity 1 46 0 200 213 0 0 chr5 22618547 22618594 -177011556 + T-rich Low_complexity Low_complexity 1 47 0 303 297 79 79 chr5 22619941 22620106 -177010044 - L1ME3A LINE L1 -11 6159 5995 336 258 91 40 chr5 22620345 22620543 -177009607 - L1ME3A LINE L1 -253 5868 5661 1474 236 67 0 chr5 22620552 22620938 -177009212 - L1MB4 LINE L1 -1 6179 5768 1179 290 94 2 chr5 22620938 22621418 -177008732 - L1ME3A LINE L1 -241 5929 5406 525 296 75 19 chr5 22621434 22621859 -177008291 - L1ME3A LINE L1 -814 5332 4884 382 155 0 0 chr5 22623812 22623883 -177006267 - L1PB4 LINE L1 0 6156 6086 1531 197 186 19 chr5 22624151 22624190 -177005960 - MSTB LTR MaLR 0 426 395 1743 193 3 0 chr5 22624190 22624486 -177005664 + AluJb SINE Alu 1 297 -15 192 97 0 0 chr5 22624486 22624517 -177005633 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1531 197 186 19 chr5 22624517 22624841 -177005309 - MSTB LTR MaLR -30 396 1 8551 205 11 2 chr5 22624841 22626477 -177003673 - MSTA-int LTR MaLR 0 1651 2 1840 170 141 5 chr5 22626479 22626856 -177003294 - MSTA LTR MaLR 0 428 1 202 338 135 23 chr5 22626860 22626993 -177003157 + L2 LINE L2 2372 2519 -795 26 30 0 0 chr5 22627273 22627306 -177002844 + AT_rich Low_complexity Low_complexity 1 33 0 903 299 78 25 chr5 22627846 22628204 -177001946 + LTR16C LTR ERVL 101 477 -14 2581 58 0 0 chr5 22628884 22629195 -177000955 + AluY SINE Alu 1 311 0 234 0 0 0 chr5 22629380 22629406 -177000744 + (TG)n Simple_repeat Simple_repeat 2 27 0 225 157 0 39 chr5 22629406 22629457 -177000693 + (TA)n Simple_repeat Simple_repeat 1 49 0 684 313 38 4 chr5 22629636 22629876 -177000274 + MIR SINE MIR 3 250 -12 22 0 0 0 chr5 22630336 22630358 -176999792 + AT_rich Low_complexity Low_complexity 1 22 0 2000 152 0 0 chr5 22630401 22630710 -176999440 + AluSx SINE Alu 1 309 -3 24 77 0 0 chr5 22631336 22631388 -176998762 + AT_rich Low_complexity Low_complexity 1 52 0 2037 118 0 33 chr5 22631876 22632182 -176997968 - AluSg SINE Alu -12 298 3 2200 235 17 0 chr5 22632395 22632855 -176997295 + Tigger7 DNA MER2_type 53 520 -213 1761 136 25 113 chr5 22632867 22633220 -176996930 - Tigger3(Golem) DNA MER2_type -2 3027 26 386 275 0 0 chr5 22633227 22633307 -176996843 + Tigger7 DNA MER2_type 2403 2482 -5 1157 276 42 30 chr5 22633311 22633713 -176996437 - MLT1C LTR MaLR -1 466 60 207 0 0 0 chr5 22633748 22633771 -176996379 + (AATAG)n Simple_repeat Simple_repeat 2 24 0 315 299 85 37 chr5 22633784 22634055 -176996095 + L1ME4a LINE L1 5826 6109 -12 2159 141 75 0 chr5 22634143 22634518 -176995632 + MER57A LTR ERV1 1 403 0 229 191 43 0 chr5 22634525 22634572 -176995578 + L1MC4 LINE L1 6654 6702 -1340 24 0 0 0 chr5 22635983 22636007 -176994143 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr5 22636297 22636323 -176993827 + AT_rich Low_complexity Low_complexity 1 26 0 220 310 103 35 chr5 22636868 22637013 -176993137 + MER5A DNA MER1_type 7 161 -28 692 174 0 8 chr5 22638734 22638866 -176991284 - FLAM_C SINE Alu 0 133 3 2261 109 0 0 chr5 22640162 22640473 -176989677 + AluY SINE Alu 1 311 0 31 0 0 0 chr5 22640818 22640849 -176989301 + AT_rich Low_complexity Low_complexity 1 31 0 184 77 51 0 chr5 22640901 22640940 -176989210 + (TA)n Simple_repeat Simple_repeat 1 41 0 25 0 0 0 chr5 22641721 22641746 -176988404 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 22642459 22642484 -176987666 + AT_rich Low_complexity Low_complexity 1 25 0 723 185 167 0 chr5 22642509 22642671 -176987479 - MER5A DNA MER1_type 0 189 1 258 250 10 39 chr5 22642718 22642822 -176987328 + MER97a DNA MER1_type? 84 184 -710 355 343 43 0 chr5 22643138 22643278 -176986872 - LTR16A LTR ERVL 0 450 305 578 247 91 85 chr5 22643280 22643632 -176986518 + MLT2B1 LTR ERVL 1 354 -60 287 81 40 27 chr5 22643639 22643713 -176986437 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 238 132 26 0 chr5 22643722 22643760 -176986390 + MLT2B1 LTR ERVL 406 444 0 262 344 23 16 chr5 22643761 22643889 -176986261 - LTR16A LTR ERVL -144 306 178 586 283 76 83 chr5 22644187 22644328 -176985822 - HERVL LTR ERVL -1923 3731 3591 1875 169 85 2 chr5 22644328 22644730 -176985420 - LTR23 LTR ERV1 -2 435 1 586 283 76 83 chr5 22644730 22645008 -176985142 - HERVL LTR ERVL -2063 3591 3315 2354 310 99 30 chr5 22645508 22645984 -176984166 - HERVL LTR ERVL -1907 3089 2648 1550 238 31 8 chr5 22645984 22646371 -176983779 - MSTD LTR MaLR 0 396 1 2354 310 99 30 chr5 22646371 22647184 -176982966 - HERVL LTR ERVL -2348 2648 1710 402 381 25 12 chr5 22647241 22647485 -176982665 - HERVL LTR ERVL -3416 1580 1334 266 374 54 9 chr5 22647674 22647896 -176982254 - HERVL LTR ERVL -3680 1316 1085 2135 109 7 0 chr5 22648006 22648291 -176981859 - AluSp SINE Alu -24 289 3 618 335 43 33 chr5 22648306 22648703 -176981447 - HERVL LTR ERVL -4138 858 458 711 275 51 36 chr5 22648808 22649084 -176981066 - HERVL LTR ERVL -4709 287 8 686 325 55 52 chr5 22649102 22649285 -176980865 - LTR16A LTR ERVL -14 436 255 1107 40 33 13 chr5 22649285 22649462 -176980688 + L1PA3 LINE L1 5998 6155 0 686 325 55 52 chr5 22649462 22649678 -176980472 - LTR16A LTR ERVL -195 255 36 1553 172 14 84 chr5 22650125 22650226 -176979924 - Tigger2a DNA MER2_type -2365 343 236 2087 107 30 0 chr5 22650226 22650525 -176979625 - AluY SINE Alu -3 308 1 1553 172 14 84 chr5 22650525 22650790 -176979360 - Tigger2a DNA MER2_type -2472 236 3 394 242 0 32 chr5 22650855 22650950 -176979200 - MLT1E1 LTR MaLR -503 151 60 347 274 0 0 chr5 22651053 22651137 -176979013 + L2 LINE L2 1885 1968 -1346 5224 167 28 15 chr5 22652863 22654324 -176975826 + L1MA8 LINE L1 4777 6249 -42 294 282 69 88 chr5 22654929 22655284 -176974866 - HAL1 LINE L1 -120 2387 2027 1955 102 47 70 chr5 22655284 22655509 -176974641 - THE1C LTR MaLR 0 375 161 2015 88 3 82 chr5 22655509 22655840 -176974310 + AluSq SINE Alu 3 307 -6 1955 102 47 70 chr5 22655840 22655998 -176974152 - THE1C LTR MaLR -214 161 1 294 282 69 88 chr5 22655998 22656029 -176974121 - HAL1 LINE L1 -480 2027 1997 3123 106 22 2 chr5 22656029 22656473 -176973677 - MLT2A2 LTR ERVL 0 453 1 294 282 69 88 chr5 22656473 22656971 -176973179 - HAL1 LINE L1 -510 1997 1519 345 276 129 72 chr5 22657014 22657348 -176972802 - HAL1 LINE L1 -1082 1425 1066 2077 84 0 24 chr5 22657348 22657635 -176972515 + AluSp SINE Alu 13 292 -21 345 276 129 72 chr5 22657635 22657673 -176972477 - HAL1 LINE L1 -1441 1066 1032 421 270 108 54 chr5 22658080 22658162 -176971988 - MLT1I LTR MaLR -110 299 223 1989 158 116 13 chr5 22658162 22658549 -176971601 + MSTA LTR MaLR 2 428 0 421 270 108 54 chr5 22658549 22658670 -176971480 - MLT1I LTR MaLR -186 223 85 183 42 0 0 chr5 22658686 22658710 -176971440 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 295 56 0 0 chr5 22659448 22659484 -176970666 - U2 snRNA snRNA -152 36 1 25 0 0 0 chr5 22659673 22659698 -176970452 + AT_rich Low_complexity Low_complexity 1 25 0 360 291 60 0 chr5 22660271 22660405 -176969745 + LTR50 LTR ERVL 1 142 -653 1445 119 13 0 chr5 22660789 22661016 -176969134 + L1MA1 LINE L1 6073 6302 0 24 67 0 0 chr5 22661457 22661502 -176968648 + AT_rich Low_complexity Low_complexity 1 45 0 306 87 0 0 chr5 22662146 22662192 -176967958 + (TG)n Simple_repeat Simple_repeat 1 46 0 868 237 117 53 chr5 22662664 22663006 -176967144 - MLT1A1 LTR MaLR 0 365 2 243 260 48 27 chr5 22663483 22663629 -176966521 - Zaphod DNA AcHobo -32 3999 3851 201 39 0 0 chr5 22664022 22664048 -176966102 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 313 389 46 11 chr5 22664111 22664286 -176965864 - MER115 DNA AcHobo -360 333 153 2760 141 13 2 chr5 22664295 22664741 -176965409 - MER67C LTR ERV1 0 710 260 1896 136 121 9 chr5 22664741 22664982 -176965168 + MER51B LTR ERV1 1 292 -85 2290 102 3 0 chr5 22664982 22665287 -176964863 - AluSp SINE Alu -7 306 1 1896 136 121 9 chr5 22665287 22665384 -176964766 + MER51B LTR ERV1 292 377 0 822 55 0 71 chr5 22665384 22665511 -176964639 + MER51B-int LTR ERV1 1 118 -7698 3907 170 10 13 chr5 22665514 22666224 -176963926 + MER51B-int LTR ERV1 788 1495 -6321 541 135 114 115 chr5 22666295 22666492 -176963658 + MER4A LTR ERV1 276 648 -131 6687 117 68 8 chr5 22666492 22667808 -176962342 + MER51B-int LTR ERV1 1810 3265 -4551 1463 151 23 0 chr5 22667823 22668081 -176962069 + MER51B-int LTR ERV1 2824 3087 -2859 3854 104 23 95 chr5 22668082 22668776 -176961374 - LTR9B LTR ERV1 0 644 1 891 220 5 28 chr5 22668786 22669004 -176961146 + MER51B-int LTR ERV1 1747 1959 -3258 1953 114 12 4 chr5 22669013 22669410 -176960740 + MER51B-int LTR ERV1 2210 2654 -2563 * 10498 122 55 22 chr5 22669397 22671084 -176959066 + MER51B-int LTR ERV1 5407 7148 -389 557 194 85 8 chr5 22671084 22671213 -176958937 + LTR54B LTR ERV1 3 141 -357 1896 151 78 0 chr5 22671213 22671532 -176958618 + MER51B-int LTR ERV1 7470 7813 -3 2237 106 109 0 chr5 22671536 22671876 -176958274 + MER51B LTR ERV1 1 377 0 1382 137 66 0 chr5 22671876 22672117 -176958033 - MER67C LTR ERV1 -447 263 7 357 24 0 0 chr5 22672164 22672206 -176957944 + (TG)n Simple_repeat Simple_repeat 2 43 0 269 194 48 32 chr5 22672243 22672305 -176957845 - MER115 DNA AcHobo -621 72 10 47 19 0 0 chr5 22672601 22672655 -176957495 + AT_rich Low_complexity Low_complexity 1 54 0 21 0 0 0 chr5 22672730 22672751 -176957399 + AT_rich Low_complexity Low_complexity 1 21 0 193 224 12 12 chr5 22672761 22672846 -176957304 + (TA)n Simple_repeat Simple_repeat 2 86 0 22 56 0 0 chr5 22672956 22672992 -176957158 + AT_rich Low_complexity Low_complexity 1 36 0 29 0 0 0 chr5 22673098 22673127 -176957023 + AT_rich Low_complexity Low_complexity 1 29 0 283 173 34 34 chr5 22673158 22673337 -176956813 + (TA)n Simple_repeat Simple_repeat 2 180 0 479 140 22 34 chr5 22673356 22673534 -176956616 + (TA)n Simple_repeat Simple_repeat 1 176 0 438 181 23 12 chr5 22673553 22673724 -176956426 + (TA)n Simple_repeat Simple_repeat 2 174 0 29 0 0 0 chr5 22673746 22673775 -176956375 + AT_rich Low_complexity Low_complexity 1 29 0 213 450 0 0 chr5 22673983 22674103 -176956047 - MIR SINE MIR -59 149 30 1873 161 18 174 chr5 22674352 22674911 -176955239 - MER70A LTR ERVL 0 472 1 612 318 70 32 chr5 22675140 22675571 -176954579 - HERVL LTR ERVL -420 5344 4898 319 273 16 48 chr5 22675896 22676037 -176954113 + MLT1I LTR MaLR 91 184 -225 744 295 40 80 chr5 22676234 22676570 -176953580 - HERVL LTR ERVL -884 4604 4282 789 235 61 24 chr5 22676570 22676783 -176953367 + MER58A DNA MER1_type 4 224 0 744 295 40 80 chr5 22676783 22676846 -176953304 - HERVL LTR ERVL -1206 4282 4218 3732 134 45 3 chr5 22676924 22677542 -176952608 - LTR9B LTR ERV1 0 644 1 247 295 16 57 chr5 22677860 22677982 -176952168 - L2 LINE L2 -2152 1162 1046 303 363 32 19 chr5 22678023 22678180 -176951970 - L2 LINE L2 -2740 574 416 486 321 46 25 chr5 22678191 22678428 -176951722 + MIR SINE MIR 5 246 -16 966 227 35 5 chr5 22678755 22678958 -176951192 - MER58A DNA MER1_type -6 218 10 1215 191 233 11 chr5 22678958 22679340 -176950810 - MLT1C LTR MaLR 0 467 1 2157 106 0 16 chr5 22679568 22679871 -176950279 - AluSg SINE Alu -12 298 1 203 250 36 24 chr5 22680387 22680471 -176949679 + (CATATA)n Simple_repeat Simple_repeat 3 87 0 420 55 0 0 chr5 22680498 22680553 -176949597 + (TG)n Simple_repeat Simple_repeat 2 56 0 407 253 22 90 chr5 22681108 22681233 -176948917 - MIR SINE MIR -21 241 130 1527 250 124 48 chr5 22681233 22681838 -176948312 - MLT1E1 LTR MaLR -3 651 1 407 253 22 90 chr5 22681838 22681890 -176948260 - MIR SINE MIR -132 130 76 1528 265 51 18 chr5 22681987 22682478 -176947672 - LTR40a LTR ERVL 0 519 13 782 255 43 51 chr5 22682490 22682745 -176947405 - HERVL40 LTR ERVL 0 5530 5278 452 334 48 48 chr5 22682723 22683097 -176947053 - MER89-int LTR ERV1 -310 6491 6118 * 1966 114 17 10 chr5 22683140 22683448 -176946702 - AluY SINE Alu 0 311 1 1133 307 63 35 chr5 22683529 22684066 -176946084 - HERVL40 LTR ERVL -3915 1615 1064 372 296 0 78 chr5 22684070 22684212 -176945938 - HERVL40 LTR ERVL -4616 914 784 195 42 0 0 chr5 22684264 22684288 -176945862 + (TAATG)n Simple_repeat Simple_repeat 1 24 0 1270 205 32 87 chr5 22684291 22684671 -176945479 + MLT1A2 LTR MaLR 16 374 0 494 333 12 0 chr5 22684678 22684843 -176945307 - HERVL40 LTR ERVL -4799 731 565 1270 272 30 92 chr5 22684886 22685463 -176944687 - HERVL40 LTR ERVL -4962 568 28 1133 245 70 47 chr5 22685479 22685924 -176944226 - LTR40b LTR ERVL 0 462 8 2145 118 23 0 chr5 22685953 22686259 -176943891 + AluSp SINE Alu 1 313 0 548 228 38 97 chr5 22686337 22686574 -176943576 - MIR SINE MIR -23 239 17 297 312 110 9 chr5 22687514 22687623 -176942527 + MIR SINE MIR 29 148 -114 2258 91 0 28 chr5 22688984 22689302 -176940848 - AluY SINE Alu -1 310 2 2411 73 0 19 chr5 22690160 22690473 -176939677 + AluY SINE Alu 5 311 0 21 71 0 0 chr5 22690626 22690668 -176939482 + AT_rich Low_complexity Low_complexity 1 42 0 2082 54 108 0 chr5 22691156 22691434 -176938716 + AluY SINE Alu 1 308 -3 2302 72 13 35 chr5 22691442 22691760 -176938390 + AluSp SINE Alu 1 311 -2 1629 188 47 3 chr5 22691941 22692282 -176937868 - L1MA6 LINE L1 -5 6295 5940 22 56 0 0 chr5 22692410 22692446 -176937704 + AT_rich Low_complexity Low_complexity 1 36 0 1036 261 178 53 chr5 22693230 22693909 -176936241 - LTR41 LTR ERVL -1 772 9 524 248 41 7 chr5 22694179 22694324 -176935826 - MER58B DNA MER1_type -24 317 168 23 33 0 0 chr5 22694324 22694354 -176935796 + AT_rich Low_complexity Low_complexity 1 30 0 252 200 215 0 chr5 22694354 22694419 -176935731 - MER58B DNA MER1_type -251 90 12 22 0 0 0 chr5 22694656 22694678 -176935472 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 22695037 22695061 -176935089 + AT_rich Low_complexity Low_complexity 1 24 0 2130 152 16 21 chr5 22695206 22695582 -176934568 - THE1C LTR MaLR 0 375 2 1479 174 48 7 chr5 22695582 22695852 -176934298 + MLT1A1 LTR MaLR 81 361 -4 1437 210 7 20 chr5 22695998 22696303 -176933847 + AluJo SINE Alu 1 301 -11 323 324 40 47 chr5 22696724 22696872 -176933278 + MIR SINE MIR 52 198 -64 1953 147 25 77 chr5 22698171 22698573 -176931577 - Tigger2 DNA MER2_type 0 2718 2338 270 0 0 0 chr5 22698587 22698617 -176931533 + (CA)n Simple_repeat Simple_repeat 2 31 0 25 0 0 0 chr5 22698825 22698850 -176931300 + AT_rich Low_complexity Low_complexity 1 25 0 4937 230 31 26 chr5 22698868 22701077 -176929073 - L1MC1 LINE L1 -6 6607 4391 886 90 0 0 chr5 22701088 22701199 -176928951 + AluSp SINE Alu 1 111 -202 1851 89 4 0 chr5 22701199 22701434 -176928716 - AluSp SINE Alu -77 236 1 6221 197 83 32 chr5 22701440 22702420 -176927730 - L1MC1 LINE L1 -3825 2601 1672 2049 137 3 13 chr5 22702420 22702733 -176927417 - AluSg SINE Alu 0 310 1 6221 197 83 32 chr5 22702733 22704140 -176926010 - L1MC1 LINE L1 -4754 1672 25 380 297 0 0 chr5 22704238 22704329 -176925821 - MER63A DNA MER1_type -18 192 102 3973 158 38 6 chr5 22704333 22705022 -176925128 + MER50 LTR ERV1 1 711 -23 358 337 86 29 chr5 22705173 22705452 -176924698 - MLT1K LTR MaLR -15 573 279 516 16 0 0 chr5 22705529 22705590 -176924560 + (TG)n Simple_repeat Simple_repeat 2 62 0 180 0 0 0 chr5 22705593 22705613 -176924537 + (GA)n Simple_repeat Simple_repeat 1 20 0 1594 229 8 11 chr5 22705946 22706304 -176923846 - MLT1A1 LTR MaLR -8 357 1 900 232 38 0 chr5 22708016 22708227 -176921923 - MER58A DNA MER1_type -5 219 1 21 36 0 0 chr5 22708400 22708428 -176921722 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 22708555 22708586 -176921564 + AT_rich Low_complexity Low_complexity 1 31 0 261 208 8 136 chr5 22708680 22708805 -176921345 + LTR33A LTR ERVL 2 110 -413 375 278 144 0 chr5 22708826 22709006 -176921144 + LTR33A LTR ERVL 318 523 0 206 306 134 30 chr5 22709575 22709709 -176920441 + MIR SINE MIR 82 229 -33 17587 71 2 15 chr5 22710724 22713930 -176916220 - L1PA6 LINE L1 0 6154 2975 18320 122 16 12 chr5 22713933 22716757 -176913393 - L1PA6 LINE L1 -3303 2843 11 372 385 6 0 chr5 22717009 22717170 -176912980 + L2 LINE L2 2371 2532 -782 258 143 0 0 chr5 22717299 22717348 -176912802 + (CA)n Simple_repeat Simple_repeat 2 50 0 204 289 58 0 chr5 22717356 22717408 -176912742 + L2 LINE L2 2702 2756 -558 223 355 13 0 chr5 22717747 22717823 -176912327 + L2 LINE L2 3237 3313 0 27 29 0 0 chr5 22718151 22718185 -176911965 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr5 22718390 22718412 -176911738 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 22718894 22718916 -176911234 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr5 22718989 22719031 -176911119 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr5 22719073 22719103 -176911047 + AT_rich Low_complexity Low_complexity 1 30 0 404 164 0 0 chr5 22719961 22720022 -176910128 + AluS SINE Alu 3 63 -240 1705 134 4 0 chr5 22770022 22770276 -176859874 + MER51B LTR ERV1 123 377 0 5820 219 23 2 chr5 22770276 22771490 -176858660 - MSTB-int LTR MaLR -412 1239 1 1647 204 29 66 chr5 22771490 22771932 -176858218 - MSTB LTR MaLR 0 426 1 4070 185 28 5 chr5 22771932 22773050 -176857100 + L1MA2 LINE L1 2066 4306 -3259 4504 136 48 11 chr5 22773055 22773782 -176856368 + THE1C-int LTR MaLR 815 1568 -12 1802 152 58 19 chr5 22773793 22774154 -176855996 + THE1C LTR MaLR 1 375 0 1677 212 59 29 chr5 22774163 22774703 -176855447 + MLT2A2 LTR ERVL 1 554 0 6823 177 38 37 chr5 22774703 22777211 -176852939 + L1MA2 LINE L1 5229 7723 0 46 45 0 0 chr5 22777211 22777278 -176852872 + AT_rich Low_complexity Low_complexity 1 67 0 2404 65 0 23 chr5 22778255 22778564 -176851586 - AluSc SINE Alu -7 302 1 204 266 57 65 chr5 22779231 22779355 -176850795 + L2 LINE L2 3137 3259 -54 23 33 0 0 chr5 22779766 22779796 -176850354 + AT_rich Low_complexity Low_complexity 1 30 0 393 306 36 30 chr5 22782414 22782751 -176847399 - L1MEc LINE L1 -1542 4673 4335 594 290 109 19 chr5 22782754 22783130 -176847020 - L1MEc LINE L1 -1898 4317 3908 1755 206 39 157 chr5 22783135 22783266 -176846884 - L1PB3 LINE L1 0 6154 6009 2141 63 19 51 chr5 22783266 22783581 -176846569 - AluY SINE Alu -6 305 1 1755 206 39 157 chr5 22783581 22783847 -176846303 - L1PB3 LINE L1 -145 6009 5893 519 49 25 62 chr5 22783847 22783928 -176846222 - MADE1 DNA Mariner -2 78 1 1755 206 39 157 chr5 22783928 22784319 -176845831 - L1PB3 LINE L1 -261 5893 5458 873 291 73 17 chr5 22784326 22784858 -176845292 - L1MEc LINE L1 -2292 3923 3362 1944 100 36 0 chr5 22784861 22785214 -176844936 - L1PA8A LINE L1 -683 5448 5086 * 2655 82 132 7 chr5 22785212 22785615 -176844535 + L1PA8A LINE L1 5669 6121 -10 30 27 0 0 chr5 22785615 22785652 -176844498 + AT_rich Low_complexity Low_complexity 1 37 0 351 0 0 0 chr5 22785652 22785691 -176844459 + (CA)n Simple_repeat Simple_repeat 2 40 0 1271 276 70 37 chr5 22785815 22786195 -176843955 - L1MEc LINE L1 -3177 3038 2672 1141 259 7 20 chr5 22786195 22786500 -176843650 - AluJo SINE Alu 0 302 2 1271 276 70 37 chr5 22786500 22787035 -176843115 - L1MEc LINE L1 -3543 2672 2156 2189 171 18 0 chr5 22787035 22787416 -176842734 - MLT1B LTR MaLR 0 390 3 392 66 0 16 chr5 22787417 22787478 -176842672 + (TA)n Simple_repeat Simple_repeat 2 61 0 1271 276 70 37 chr5 22787478 22787734 -176842416 - L1MEc LINE L1 -4058 2157 1866 1003 208 63 4 chr5 22787741 22788010 -176842140 + L1MA7 LINE L1 6007 6291 0 2065 135 0 3 chr5 22788183 22788494 -176841656 + AluSg SINE Alu 1 310 0 348 351 86 34 chr5 22788570 22788895 -176841255 - L1MEc LINE L1 -5963 433 92 30 89 0 0 chr5 22789149 22789228 -176840922 + AT_rich Low_complexity Low_complexity 1 79 0 45 19 0 0 chr5 22789297 22789349 -176840801 + AT_rich Low_complexity Low_complexity 1 52 0 418 308 84 41 chr5 22789874 22790267 -176839883 + L1M4 LINE L1 3288 3697 -2449 301 270 115 27 chr5 22790331 22790588 -176839562 + L1M4 LINE L1 4802 5078 -1068 33 0 0 0 chr5 22792182 22792215 -176837935 + AT_rich Low_complexity Low_complexity 1 33 0 381 286 16 0 chr5 22792291 22792417 -176837733 + ERVL LTR ERVL 3906 4033 -1731 236 274 94 9 chr5 22792707 22792813 -176837337 + LTR50 LTR ERVL 620 734 -61 248 231 42 28 chr5 22792875 22793018 -176837132 - L1M4 LINE L1 -3856 2290 2146 2986 168 29 20 chr5 22793132 22793641 -176836509 + MLT2B3 LTR ERVL 1 517 -37 589 58 23 0 chr5 22793641 22793727 -176836423 + (TCTA)n Simple_repeat Simple_repeat 3 90 0 2986 168 29 20 chr5 22793727 22793766 -176836384 + MLT2B3 LTR ERVL 517 554 0 392 350 33 47 chr5 22794541 22794841 -176835309 - L2 LINE L2 -151 3162 2867 191 35 0 35 chr5 22794877 22794906 -176835244 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 3450 127 14 5 chr5 22794906 22795464 -176834686 - L1PB1 LINE L1 -7 6144 5582 1636 281 45 37 chr5 22795464 22796036 -176834114 + MLT1E LTR MaLR 17 593 0 260 363 38 25 chr5 22797034 22797191 -176832959 - L2 LINE L2 -290 3023 2865 216 296 112 51 chr5 22797804 22798000 -176832150 - MIR SINE MIR -30 232 25 442 332 49 40 chr5 22798310 22798536 -176831614 - MIR SINE MIR -30 232 5 21 36 0 0 chr5 22798543 22798571 -176831579 + AT_rich Low_complexity Low_complexity 1 28 0 31 58 0 0 chr5 22798994 22799046 -176831104 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr5 22799984 22800006 -176830144 + AT_rich Low_complexity Low_complexity 1 22 0 222 342 107 25 chr5 22803827 22804023 -176826127 + MIR SINE MIR 49 260 -2 430 291 158 0 chr5 22804035 22804238 -176825912 - MIR SINE MIR -16 246 12 477 230 40 6 chr5 22804698 22804835 -176825315 - L1MC4 LINE L1 -810 6975 6848 216 256 26 13 chr5 22805756 22805834 -176824316 + (CTATT)n Simple_repeat Simple_repeat 4 82 0 1498 217 22 22 chr5 22807502 22807866 -176822284 + MLT1A1 LTR MaLR 2 365 0 28 29 0 0 chr5 22809816 22809851 -176820299 + AT_rich Low_complexity Low_complexity 1 35 0 1858 204 22 3 chr5 22810226 22810584 -176819566 + MLT1A1 LTR MaLR 1 365 0 908 308 99 47 chr5 22811153 22811350 -176818800 - L2 LINE L2 -31 3282 3097 443 33 16 0 chr5 22811360 22811421 -176818729 + (TA)n Simple_repeat Simple_repeat 1 62 0 2208 135 0 29 chr5 22811421 22811467 -176818683 + L1PB4 LINE L1 5790 5836 -320 1919 108 0 0 chr5 22811467 22811751 -176818399 + AluSc SINE Alu 21 304 0 2208 135 0 29 chr5 22811751 22812075 -176818075 + L1PB4 LINE L1 5836 6154 -2 908 308 99 47 chr5 22812075 22812091 -176818059 - L2 LINE L2 -216 3097 3083 396 0 0 0 chr5 22812091 22812135 -176818015 + (CA)n Simple_repeat Simple_repeat 2 45 0 908 308 99 47 chr5 22812135 22812609 -176817541 - L2 LINE L2 -230 3083 2568 1969 71 0 97 chr5 22813328 22813675 -176816475 - AluY SINE Alu 0 317 1 212 0 0 35 chr5 22814126 22814155 -176815995 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 2076 139 3 0 chr5 22814158 22814461 -176815689 - AluSq SINE Alu -9 304 1 31 82 0 0 chr5 22814553 22814626 -176815524 + AT_rich Low_complexity Low_complexity 1 73 0 21 0 0 0 chr5 22814933 22814954 -176815196 + AT_rich Low_complexity Low_complexity 1 21 0 1847 125 10 35 chr5 22815660 22815982 -176814168 - AluSx SINE Alu 0 315 1 420 278 25 101 chr5 22816945 22817222 -176812928 - L2 LINE L2 -17 3296 3041 538 157 43 9 chr5 22817268 22817383 -176812767 + L1MB4 LINE L1 6061 6179 -1 5744 219 46 76 chr5 22817400 22818359 -176811791 + L1MC3 LINE L1 5840 6598 -1195 1931 152 152 8 chr5 22818359 22818733 -176811417 - MSTA LTR MaLR 0 428 1 5744 219 46 76 chr5 22818733 22819895 -176810255 + L1MC3 LINE L1 6598 7793 0 24 0 0 0 chr5 22819942 22819966 -176810184 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr5 22820437 22820474 -176809676 + AT_rich Low_complexity Low_complexity 1 37 0 655 258 90 39 chr5 22820557 22820790 -176809360 - L1MCb LINE L1 -5249 796 552 1317 183 15 74 chr5 22820824 22821162 -176808988 - L1MA10 LINE L1 -1 6333 6016 1023 299 60 37 chr5 22821209 22821441 -176808709 - L1MCb LINE L1 -5498 547 322 1998 60 38 88 chr5 22821441 22821759 -176808391 + AluSq SINE Alu 1 302 -11 1023 299 60 37 chr5 22821759 22822061 -176808089 - L1MCb LINE L1 -5723 322 1 562 339 149 45 chr5 22822258 22822928 -176807222 - L1MEc LINE L1 -4552 1984 1093 228 172 0 0 chr5 22823159 22823217 -176806933 + (CA)n Simple_repeat Simple_repeat 2 59 0 270 161 25 37 chr5 22823897 22823911 -176806239 + (TA)n Simple_repeat Simple_repeat 2 15 -66 180 0 0 0 chr5 22823911 22823931 -176806219 + (CA)n Simple_repeat Simple_repeat 2 21 0 270 161 25 37 chr5 22823931 22823997 -176806153 + (TA)n Simple_repeat Simple_repeat 15 81 0 458 68 41 14 chr5 22824171 22824244 -176805906 - MADE1 DNA Mariner 0 80 6 456 274 26 7 chr5 22824465 22824618 -176805532 + L1ME3A LINE L1 6001 6156 -14 279 294 0 12 chr5 22825029 22825114 -176805036 + GA-rich Low_complexity Low_complexity 3 86 0 231 103 0 0 chr5 22825315 22825354 -176804796 + (TG)n Simple_repeat Simple_repeat 2 40 0 26 30 0 0 chr5 22825521 22825554 -176804596 + AT_rich Low_complexity Low_complexity 1 33 0 1763 139 3 52 chr5 22825564 22825688 -176804462 - AluJo SINE Alu -17 295 167 366 23 0 0 chr5 22825688 22825731 -176804419 + (CA)n Simple_repeat Simple_repeat 1 43 0 1763 139 3 52 chr5 22825731 22825915 -176804235 - AluJo SINE Alu -145 167 2 631 144 18 0 chr5 22825925 22826036 -176804114 + L1MB4 LINE L1 6066 6178 -2 22 0 0 0 chr5 22826709 22826731 -176803419 + AT_rich Low_complexity Low_complexity 1 22 0 236 250 14 14 chr5 22828521 22828593 -176801557 + (TA)n Simple_repeat Simple_repeat 2 73 0 333 47 0 0 chr5 22829580 22829623 -176800527 + (TG)n Simple_repeat Simple_repeat 1 43 0 290 282 0 0 chr5 22830706 22830777 -176799373 - L1MEc LINE L1 -4662 1734 1664 1965 120 17 3 chr5 22831255 22831555 -176798595 - AluSc SINE Alu -5 304 1 4966 162 21 14 chr5 22831576 22832716 -176797434 + L1PA15 LINE L1 5005 6148 -17 38 22 0 0 chr5 22832732 22832777 -176797373 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr5 22833041 22833063 -176797087 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 22834053 22834075 -176796075 + AT_rich Low_complexity Low_complexity 1 22 0 287 275 78 82 chr5 22834176 22834602 -176795548 - L1M4 LINE L1 -1089 5057 4634 3039 183 32 32 chr5 22834940 22835590 -176794560 - MER39B LTR ERV1 -3 650 1 22 0 0 0 chr5 22836330 22836352 -176793798 + AT_rich Low_complexity Low_complexity 1 22 0 37 52 0 0 chr5 22836474 22836532 -176793618 + AT_rich Low_complexity Low_complexity 1 58 0 423 0 0 0 chr5 22836557 22836604 -176793546 + (TG)n Simple_repeat Simple_repeat 2 48 0 10955 246 37 40 chr5 22837076 22838753 -176791397 + L1PA14 LINE L1 2825 4506 -3093 2097 116 3 16 chr5 22838753 22839064 -176791086 + AluSp SINE Alu 1 307 -6 10955 246 37 40 chr5 22839064 22841080 -176789070 + L1PA14 LINE L1 4506 6496 -1103 1773 173 7 3 chr5 22841080 22841375 -176788775 + AluSx SINE Alu 1 296 -16 10955 246 37 40 chr5 22841375 22842471 -176787679 + L1PA14 LINE L1 6496 7594 -5 27 29 0 0 chr5 22842471 22842505 -176787645 + AT_rich Low_complexity Low_complexity 1 34 0 1992 121 3 51 chr5 22842905 22843045 -176787105 + AluSq SINE Alu 3 148 -165 1921 126 36 0 chr5 22843045 22843346 -176786804 + AluSx SINE Alu 1 312 0 1992 121 3 51 chr5 22843346 22843520 -176786630 + AluSq SINE Alu 148 302 -11 300 325 64 32 chr5 22844379 22844536 -176785614 - L2 LINE L2 -531 2783 2622 250 351 98 57 chr5 22844825 22845508 -176784642 - L2 LINE L2 -1646 1668 958 1952 136 9 9 chr5 22846853 22847177 -176782973 + L1PA14 LINE L1 5836 6159 -2 29 28 0 0 chr5 22847212 22847248 -176782902 + AT_rich Low_complexity Low_complexity 1 36 0 543 152 10 0 chr5 22848544 22848643 -176781507 - MLT1C LTR MaLR -367 100 1 415 356 20 0 chr5 22849672 22849818 -176780332 + MIR SINE MIR 102 250 -12 372 282 0 0 chr5 22851473 22851558 -176778592 + L2 LINE L2 2619 2703 -611 260 320 172 34 chr5 22851658 22851949 -176778201 + L2 LINE L2 2891 3221 -92 1018 92 1 6 chr5 22852182 22852355 -176777795 - L1P5 LINE L1 -553 5598 5425 5195 197 42 13 chr5 22852950 22855152 -176774998 - L1MA5 LINE L1 0 6300 4042 534 91 0 0 chr5 22855153 22855230 -176774920 + PABL_B LTR ERV1 591 667 0 717 120 75 8 chr5 22855378 22855511 -176774639 + LTR23 LTR ERV1 1 142 -295 1021 164 96 0 chr5 22855511 22855719 -176774431 + LTR10D-int LTR ERV1 4647 4874 -62 195 266 0 0 chr5 22856256 22856320 -176773830 + (CA)n Simple_repeat Simple_repeat 2 65 0 3652 67 21 18 chr5 22856321 22856832 -176773318 + LTR10D LTR ERV1 1 513 0 183 262 36 48 chr5 22859704 22859788 -176770362 - L2 LINE L2 -6 3266 3184 236 299 143 7 chr5 22859915 22860062 -176770088 + L2 LINE L2 2458 2624 -690 460 308 151 19 chr5 22860120 22860445 -176769705 + L2 LINE L2 2921 3288 -25 22 56 0 0 chr5 22861821 22861857 -176768293 + AT_rich Low_complexity Low_complexity 1 36 0 233 321 12 12 chr5 22863324 22863408 -176766742 - L2 LINE L2 0 3313 3230 295 331 83 0 chr5 22863589 22863722 -176766428 - MIR SINE MIR -118 144 1 1919 141 7 7 chr5 22863728 22864011 -176766139 + AluSx SINE Alu 1 283 -29 2212 133 0 0 chr5 22864980 22865282 -176764868 - AluSx SINE Alu -8 304 3 2222 119 3 0 chr5 22865300 22865603 -176764547 - AluSq SINE Alu -7 306 3 1953 118 35 7 chr5 22865825 22866113 -176764037 + AluSq SINE Alu 3 298 -15 1836 172 0 0 chr5 22866124 22866409 -176763741 + AluJb SINE Alu 1 285 -27 431 254 17 66 chr5 22867174 22867347 -176762803 + MIR SINE MIR 68 225 -37 2186 114 0 3 chr5 22867672 22867980 -176762170 - AluSx SINE Alu -5 307 1 248 238 12 0 chr5 22868224 22868304 -176761846 + L1MB2 LINE L1 3940 4020 -2126 1622 64 0 68 chr5 22868312 22868532 -176761618 - AluY SINE Alu -11 300 96 1236 99 0 0 chr5 22868637 22868799 -176761351 + AluSg/x SINE Alu 139 300 -12 4415 205 7 25 chr5 22868802 22868847 -176761303 + L1MB2 LINE L1 4242 4286 -1885 2307 84 0 0 chr5 22868847 22869134 -176761016 + AluY SINE Alu 1 287 -24 4415 205 7 25 chr5 22869134 22870112 -176760038 + L1MB2 LINE L1 4286 5280 -891 629 208 15 8 chr5 22870112 22870242 -176759908 + FLAM_A SINE Alu 1 131 -2 4415 205 7 25 chr5 22870242 22870254 -176759896 + L1MB2 LINE L1 5280 5291 -880 2318 91 0 3 chr5 22870254 22870552 -176759598 + AluSq SINE Alu 1 297 -16 4415 205 7 25 chr5 22870552 22870623 -176759527 + L1MB2 LINE L1 5291 5362 -809 1189 201 12 115 chr5 22870623 22870776 -176759374 + MLT1A2 LTR MaLR 1 168 -206 1920 115 39 14 chr5 22870776 22871062 -176759088 + AluSx SINE Alu 1 293 -19 1189 201 12 115 chr5 22871062 22871325 -176758825 + MLT1A2 LTR MaLR 168 374 0 4415 205 7 25 chr5 22871325 22871548 -176758602 + L1MB2 LINE L1 5362 5545 -626 238 200 0 0 chr5 22871548 22871603 -176758547 - MSTD LTR MaLR 0 396 342 2210 119 3 0 chr5 22871616 22871919 -176758231 - AluSg SINE Alu -6 304 1 1539 196 25 17 chr5 22871919 22872272 -176757878 - MSTD LTR MaLR -38 358 3 3111 164 25 21 chr5 22872272 22872900 -176757250 + L1MB2 LINE L1 5539 6169 -2 2065 147 13 13 chr5 22873873 22874185 -176755965 + AluSx SINE Alu 1 312 0 1811 135 0 44 chr5 22874359 22874655 -176755495 - AluSx SINE Alu -29 283 1 964 157 0 0 chr5 22874688 22874828 -176755322 + FRAM SINE Alu 6 145 -31 411 21 0 0 chr5 22874843 22874891 -176755259 + (CAT)n Simple_repeat Simple_repeat 2 49 0 1832 132 26 0 chr5 22874891 22875156 -176754994 + AluSx SINE Alu 31 302 -10 2240 116 0 19 chr5 22875158 22875469 -176754681 + AluSp SINE Alu 1 305 -8 615 281 41 0 chr5 22878279 22878525 -176751625 - L1PA12 LINE L1 -5070 2511 2256 252 241 0 0 chr5 22878802 22878860 -176751290 - L1PA12 LINE L1 -5399 2182 2125 2275 113 96 25 chr5 22879216 22879614 -176750536 - MSTA LTR MaLR -2 426 1 1101 223 38 15 chr5 22879658 22879999 -176750151 + L1 LINE L1 4984 5332 -814 667 203 8 0 chr5 22880001 22880119 -176750031 + FLAM_C SINE Alu 5 123 -20 1581 186 7 0 chr5 22880135 22880456 -176749694 + AluJb SINE Alu 1 323 0 849 240 128 23 chr5 22880467 22880597 -176749553 - L1MC/D LINE L1 -749 5397 5282 1477 150 57 43 chr5 22880597 22880897 -176749253 - AluJb SINE Alu -8 304 1 849 240 128 23 chr5 22880897 22881380 -176748770 - L1MC/D LINE L1 -864 5282 4979 1563 161 152 6 chr5 22881406 22881741 -176748409 - MSTA LTR MaLR -44 384 1 2324 113 0 0 chr5 22882377 22882678 -176747472 - AluSc SINE Alu -8 301 1 235 311 104 44 chr5 22883478 22883661 -176746489 - L2 LINE L2 -3 3310 3117 2852 201 13 0 chr5 22884001 22884637 -176745513 + L1 LINE L1 3351 3994 -2152 5306 200 23 12 chr5 22884645 22885762 -176744388 + MSTA-int LTR MaLR 449 1578 -2 1061 146 91 10 chr5 22885764 22886073 -176744077 + MSTA LTR MaLR 1 428 0 24 0 0 0 chr5 22886569 22886593 -176743557 + AT_rich Low_complexity Low_complexity 1 24 0 449 316 157 34 chr5 22887477 22887923 -176742227 - L1MC4a LINE L1 -1789 6019 5519 347 251 72 30 chr5 22887958 22888125 -176742025 - L1MC4a LINE L1 -2379 5429 5256 21 82 0 0 chr5 22888449 22888498 -176741652 + AT_rich Low_complexity Low_complexity 1 49 0 384 111 33 11 chr5 22888701 22888791 -176741359 + (TTAAA)n Simple_repeat Simple_repeat 4 95 0 251 277 27 20 chr5 22888952 22889100 -176741050 + (TA)n Simple_repeat Simple_repeat 2 150 0 188 213 16 0 chr5 22889365 22889426 -176740724 + (TA)n Simple_repeat Simple_repeat 2 63 0 237 288 12 56 chr5 22889490 22889650 -176740500 - L1MC4a LINE L1 -2210 3936 3784 29 47 0 0 chr5 22889968 22890011 -176740139 + AT_rich Low_complexity Low_complexity 1 43 0 209 346 0 0 chr5 22890615 22890693 -176739457 + L2 LINE L2 3191 3268 -4 1079 229 142 30 chr5 22890942 22891581 -176738569 + L1MCa LINE L1 1847 2596 -3947 627 231 0 7 chr5 22891591 22891734 -176738416 + L1MC3 LINE L1 6690 6831 -954 1354 207 4 15 chr5 22891797 22892067 -176738083 + AluJo SINE Alu 33 299 -13 1033 235 65 14 chr5 22892108 22892478 -176737672 + L1MC3 LINE L1 6916 7304 -481 10862 225 34 20 chr5 22892490 22895998 -176734152 + L1PA15 LINE L1 1 3457 -3359 2525 43 0 3 chr5 22895998 22896297 -176733853 + AluY SINE Alu 1 298 -13 10862 225 34 20 chr5 22896297 22896527 -176733623 + L1PA15 LINE L1 3457 3682 -3134 246 49 0 0 chr5 22896527 22896568 -176733582 + Alu SINE Alu 259 299 0 10862 225 34 20 chr5 22896568 22898650 -176731500 + L1PA15 LINE L1 3682 6020 -796 1909 108 6 99 chr5 22898650 22898994 -176731156 - AluSx SINE Alu 0 312 1 10862 225 34 20 chr5 22898994 22899802 -176730348 + L1PA15 LINE L1 6020 6815 -1 424 162 0 0 chr5 22899805 22899873 -176730277 + L1MC3 LINE L1 7292 7359 -426 1006 281 107 28 chr5 22899881 22900321 -176729829 - MLT1D LTR MaLR 0 505 25 1743 181 33 0 chr5 22900321 22900620 -176729530 - AluJb SINE Alu -3 309 1 1006 281 107 28 chr5 22900620 22900646 -176729504 - MLT1D LTR MaLR -480 25 2 1314 215 60 24 chr5 22900650 22901032 -176729118 + L1MC3 LINE L1 7366 7761 -24 25 51 0 0 chr5 22901039 22901078 -176729072 + AT_rich Low_complexity Low_complexity 1 39 0 659 233 22 56 chr5 22901586 22901766 -176728384 - LTR40b LTR ERVL 0 462 289 1213 240 101 59 chr5 22901817 22902238 -176727912 - MLT2B1 LTR ERVL -25 495 50 1870 179 36 0 chr5 22902238 22902574 -176727576 + MER7A DNA MER2_type 1 346 0 1213 240 101 59 chr5 22902574 22902627 -176727523 - MLT2B1 LTR ERVL -470 50 1 758 223 70 9 chr5 22902627 22902842 -176727308 - LTR40a LTR ERVL -291 228 1 34 24 0 0 chr5 22903565 22903606 -176726544 + AT_rich Low_complexity Low_complexity 1 41 0 409 379 35 0 chr5 22903928 22904324 -176725826 - L1ME3A LINE L1 -287 5883 5474 1078 214 4 76 chr5 22904663 22904939 -176725211 + AluJo SINE Alu 1 256 -56 191 86 0 29 chr5 22905041 22905076 -176725074 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 236 91 61 30 chr5 22905238 22905304 -176724846 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 1108 321 124 24 chr5 22905514 22906399 -176723751 - L2 LINE L2 -1 3312 2329 1990 182 8 0 chr5 22906404 22906755 -176723395 - MER47A DNA MER2_type 0 366 13 579 340 89 0 chr5 22906756 22907038 -176723112 - L2 LINE L2 -988 2326 2020 1807 159 44 44 chr5 22907393 22907757 -176722393 - THE1B LTR MaLR 0 364 1 362 228 76 51 chr5 22907917 22908114 -176722036 - L1M4 LINE L1 -1300 4846 4645 538 133 19 19 chr5 22908170 22908275 -176721875 + MER4A LTR ERV1 1 105 -559 231 261 29 14 chr5 22908383 22908452 -176721698 + LTR34 LTR ERV1 626 695 -4 312 330 59 31 chr5 22908518 22908806 -176721344 - L1M4 LINE L1 -1638 4508 4213 729 153 0 8 chr5 22908913 22909037 -176721113 + L1M2 LINE L1 5495 5617 -695 22 56 0 0 chr5 22909293 22909329 -176720821 + AT_rich Low_complexity Low_complexity 1 36 0 718 229 0 0 chr5 22910230 22910370 -176719780 - AluJb SINE Alu -14 298 159 1988 119 6 38 chr5 22912135 22912453 -176717697 + AluSc SINE Alu 1 308 -1 201 215 31 0 chr5 22912485 22912550 -176717600 + (TTTA)n Simple_repeat Simple_repeat 3 69 0 2368 212 63 49 chr5 22912648 22913430 -176716720 - L1 LINE L1 -893 5253 4461 * 2511 171 60 105 chr5 22913426 22914140 -176716010 + L1MA9 LINE L1 5296 5977 -335 1509 244 63 6 chr5 22914156 22914521 -176715629 + MSTD LTR MaLR 11 396 0 1199 201 31 20 chr5 22914521 22914814 -176715336 + L1MA9 LINE L1 5979 6274 -38 241 305 42 84 chr5 22914919 22915158 -176714992 + MLT1H1 LTR MaLR 324 552 -3 1174 205 23 91 chr5 22915924 22916309 -176713841 + MLT1A1 LTR MaLR 4 362 -3 746 223 201 32 chr5 22917124 22917193 -176712957 - MLT1E1 LTR MaLR 0 654 598 1147 203 60 100 chr5 22917193 22917662 -176712488 + LTR7 LTR ERV1 1 450 0 746 223 201 32 chr5 22917662 22917928 -176712222 - MLT1E1 LTR MaLR -56 598 205 382 238 79 0 chr5 22917937 22918038 -176712112 + MLT1E1 LTR MaLR 83 191 -463 21 0 0 0 chr5 22918156 22918177 -176711973 + AT_rich Low_complexity Low_complexity 1 21 0 1429 209 66 123 chr5 22918403 22919174 -176710976 - LTR8A LTR ERV1 0 727 1 207 0 0 0 chr5 22919394 22919417 -176710733 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1618 156 26 7 chr5 22919419 22919689 -176710461 - AluSx SINE Alu -36 276 2 766 274 15 15 chr5 22919806 22920010 -176710140 - MER82 DNA MER2_type -2 651 448 3800 45 31 0 chr5 22920656 22921142 -176709008 - L1PA3 LINE L1 -3 6152 5652 21 0 0 0 chr5 22921481 22921502 -176708648 + AT_rich Low_complexity Low_complexity 1 21 0 2219 99 7 0 chr5 22921690 22921993 -176708157 - AluSp SINE Alu -8 305 1 227 355 16 48 chr5 22922508 22922632 -176707518 + LTR33 LTR ERVL 40 159 -362 317 296 17 26 chr5 22922745 22922860 -176707290 + LTR33 LTR ERVL 333 446 -75 2055 74 32 11 chr5 22922911 22923196 -176706954 + AluY SINE Alu 1 291 -20 213 94 0 0 chr5 22923972 22924004 -176706146 + (CA)n Simple_repeat Simple_repeat 2 33 0 1066 211 13 0 chr5 22924427 22924655 -176705495 - L1MB2 LINE L1 -7 6164 5934 440 123 27 0 chr5 22924663 22924736 -176705414 + L1M4 LINE L1 5705 5779 -395 207 0 0 0 chr5 22925034 22925057 -176705093 + (CATG)n Simple_repeat Simple_repeat 4 26 0 1841 150 122 18 chr5 22925991 22926377 -176703773 + MSTA LTR MaLR 1 426 -2 556 343 25 21 chr5 22926690 22926976 -176703174 + MLT1J LTR MaLR 1 287 -224 405 160 13 0 chr5 22927644 22927719 -176702431 + MADE1 DNA Mariner 1 76 -4 26 30 0 0 chr5 22927759 22927792 -176702358 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr5 22929951 22929980 -176700170 + AT_rich Low_complexity Low_complexity 1 29 0 776 228 18 41 chr5 22930526 22930745 -176699405 - MER20 DNA MER1_type 0 219 6 1307 268 59 60 chr5 22930864 22931948 -176698202 - L1ME3A LINE L1 -4 6664 4862 576 256 52 24 chr5 22931945 22932234 -176697916 - L1ME3A LINE L1 -2978 3666 3370 * 671 261 90 8 chr5 22933246 22933480 -176696670 - L1MB5 LINE L1 -8 6166 5914 673 111 0 10 chr5 22933480 22933579 -176696571 + MER4A LTR ERV1 1 98 -566 1403 145 63 29 chr5 22933579 22933913 -176696237 + MER4A LTR ERV1 261 664 0 1083 185 83 62 chr5 22933913 22934237 -176695913 - L1MB5 LINE L1 -263 5911 5581 1694 284 98 59 chr5 22934263 22935402 -176694748 - L1ME3A LINE L1 -5353 1189 7 200 200 0 22 chr5 22935691 22935736 -176694414 + (CA)n Simple_repeat Simple_repeat 2 45 0 1936 208 12 12 chr5 22936553 22936667 -176693483 - MER57A LTR ERV1 0 403 290 3902 136 9 3 chr5 22936667 22937298 -176692852 + MER41B LTR ERV1 1 635 0 1936 208 12 12 chr5 22937298 22937586 -176692564 - MER57A LTR ERV1 -112 291 1 2569 208 103 33 chr5 22937799 22938530 -176691620 - LTR48 LTR ERV1 -5 782 1 626 226 56 58 chr5 22938698 22938975 -176691175 + MLT1G1 LTR MaLR 11 318 -277 538 254 43 0 chr5 22938988 22939139 -176691011 + MLT1G1 LTR MaLR 426 595 0 1224 93 6 0 chr5 22940442 22940603 -176689547 - AluSg/x SINE Alu -14 296 135 263 311 0 0 chr5 22940604 22940707 -176689443 - L1MA10 LINE L1 -63 6271 6169 2121 107 10 3 chr5 22940801 22941101 -176689049 - AluSg SINE Alu -8 302 1 779 206 29 75 chr5 22941155 22941467 -176688683 - L1MB5 LINE L1 -687 5483 5186 1569 122 59 105 chr5 22941485 22941526 -176688624 - THE1C LTR MaLR 0 375 334 2074 128 3 3 chr5 22941526 22941838 -176688312 + AluSx SINE Alu 1 312 0 1569 122 59 105 chr5 22941838 22942188 -176687962 - THE1C LTR MaLR -41 334 2 1563 259 38 79 chr5 22942387 22942784 -176687366 - L1MB5 LINE L1 -1979 4167 3755 2129 107 10 10 chr5 22942784 22943093 -176687057 - AluSc SINE Alu 0 309 1 1563 259 38 79 chr5 22943093 22943363 -176686787 - L1MB5 LINE L1 -2391 3755 3534 240 35 0 0 chr5 22943363 22943392 -176686758 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1563 259 38 79 chr5 22943392 22943508 -176686642 - L1MB5 LINE L1 -2612 3534 3415 504 335 30 15 chr5 22943968 22944171 -176685979 + HERVL LTR ERVL 4117 4322 -1332 198 103 0 0 chr5 22944352 22944381 -176685769 + (CA)n Simple_repeat Simple_repeat 2 30 0 723 368 42 17 chr5 22945308 22945718 -176684432 + LTR16A LTR ERVL 18 437 -13 2239 239 29 63 chr5 22946207 22946892 -176683258 - LTR8 LTR ERV1 0 691 30 21 36 0 0 chr5 22947108 22947136 -176683014 + AT_rich Low_complexity Low_complexity 1 28 0 6042 162 63 8 chr5 22948179 22949346 -176680804 - Tigger3b DNA MER2_type 0 1231 1 546 339 9 14 chr5 22949346 22949565 -176680585 - LTR16A LTR ERVL -147 303 86 2489 54 30 0 chr5 22949877 22950175 -176679975 - AluY SINE Alu -4 307 1 215 182 0 36 chr5 22950361 22950416 -176679734 + A-rich Low_complexity Low_complexity 2 54 0 1599 265 100 21 chr5 22950768 22951297 -176678853 + MLT1E2 LTR MaLR 56 626 0 27 0 0 0 chr5 22951632 22951659 -176678491 + AT_rich Low_complexity Low_complexity 1 27 0 729 190 110 112 chr5 22952110 22952537 -176677613 + L1MC4 LINE L1 7614 8039 -3 189 0 0 0 chr5 22952815 22952836 -176677314 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3543 83 16 16 chr5 22952837 22953341 -176676809 - L1PA7 LINE L1 -13 6141 5638 3857 62 10 2 chr5 22954525 22955023 -176675127 - L1PA5 LINE L1 -2 6152 5651 915 56 8 8 chr5 22955023 22955149 -176675001 + L1P LINE L1 4464 4589 -1557 248 229 0 0 chr5 22955466 22955514 -176674636 - L1PA12 LINE L1 -7526 55 8 2262 116 0 0 chr5 22955599 22955901 -176674249 + AluSx SINE Alu 1 302 -10 1146 97 11 28 chr5 22958631 22958807 -176671343 + AluY SINE Alu 1 173 -138 946 99 0 0 chr5 22958903 22959034 -176671116 + AluY SINE Alu 173 303 -8 646 130 0 0 chr5 22960224 22960324 -176669826 - L1P4 LINE L1 -632 5534 5435 5083 211 184 23 chr5 22960324 22961606 -176668544 + MER52A LTR ERV1 1 1488 -267 2408 43 7 10 chr5 22961746 22962050 -176668100 + AluY SINE Alu 5 307 -4 180 0 0 0 chr5 22962087 22962107 -176668043 + (CAA)n Simple_repeat Simple_repeat 2 21 0 258 317 16 24 chr5 22964800 22964923 -176665227 + L1ME LINE L1 290 411 -5659 516 215 8 8 chr5 22965445 22965566 -176664584 + MSTB-int LTR MaLR 1530 1650 -1 1551 241 66 3 chr5 22965567 22965948 -176664202 + MSTB LTR MaLR 1 405 -21 246 319 32 0 chr5 22966384 22966478 -176663672 - HAL1b LINE L1 -975 373 277 2100 129 3 7 chr5 22966820 22967130 -176663020 - AluSq SINE Alu 0 313 5 3755 117 28 3 chr5 22967384 22967949 -176662201 - LTR19B LTR ERV1 -1 579 1 297 208 0 0 chr5 22968497 22968569 -176661581 + (TA)n Simple_repeat Simple_repeat 2 73 0 325 287 0 0 chr5 22968572 22968659 -176661491 + L1MC4 LINE L1 6615 6701 -1341 * 338 293 40 10 chr5 22968581 22968680 -176661470 - L1MC4 LINE L1 -1337 6705 6604 22 0 0 0 chr5 22968855 22968877 -176661273 + AT_rich Low_complexity Low_complexity 1 22 0 1536 113 14 102 chr5 22969018 22969301 -176660849 - AluSx SINE Alu -25 287 30 1140 187 4 41 chr5 22969939 22970206 -176659944 - pTR5 LTR ERV1 -1441 997 741 733 25 50 118 chr5 22970412 22970531 -176659619 - HERVK14 LTR ERVK 0 5945 5835 326 191 0 20 chr5 22970531 22970601 -176659549 - MER41C LTR ERV1 -493 61 6 3460 53 6 4 chr5 22970601 22971279 -176658871 - HERVK3 LTR ERVK -181 5764 5013 678 108 0 0 chr5 22971278 22971371 -176658779 - HERVK3 LTR ERVK -1545 4400 4308 * 288 91 254 0 chr5 22971589 22971644 -176658506 - HERVK3 LTR ERVK -7025 218 150 200 203 27 54 chr5 22971651 22971725 -176658425 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 3225 101 37 0 chr5 22972388 22972843 -176657307 - HERVK3 LTR ERVK -3769 2176 1705 5397 70 1 10 chr5 22972877 22973582 -176656568 - HERVK3 LTR ERVK -5246 699 1 2107 99 84 51 chr5 22973582 22973981 -176656169 - LTR14B LTR ERVK 0 608 3 1364 66 61 20 chr5 22974545 22974741 -176655409 - AluY SINE Alu 0 311 108 471 274 116 4 chr5 22975610 22975851 -176654299 + L1PA16 LINE L1 8 275 -7306 4066 141 21 20 chr5 22975853 22976562 -176653588 - MER50 LTR ERV1 -24 710 1 246 311 94 80 chr5 22976562 22977127 -176653023 + L1PA16 LINE L1 272 844 -6737 * 819 291 35 43 chr5 22977114 22977482 -176652668 + L1PA16 LINE L1 1817 2181 -5400 4278 240 34 43 chr5 22977667 22979863 -176650287 + L1PA16 LINE L1 2318 4531 -3053 4300 170 56 49 chr5 22979886 22980919 -176649231 + L1PA16 LINE L1 6185 7223 -381 293 49 49 16 chr5 22980919 22980980 -176649170 + (TA)n Simple_repeat Simple_repeat 1 63 0 4300 170 56 49 chr5 22980980 22981359 -176648791 + L1PA16 LINE L1 7223 7598 -6 1828 181 18 64 chr5 22983154 22983607 -176646543 + MER31A LTR ERV1 1 432 -53 23 33 0 0 chr5 22984108 22984138 -176646012 + AT_rich Low_complexity Low_complexity 1 30 0 35 98 0 0 chr5 22984252 22984364 -176645786 + AT_rich Low_complexity Low_complexity 1 112 0 1942 129 16 13 chr5 22984617 22984926 -176645224 - AluSx SINE Alu -2 310 1 2151 117 0 3 chr5 22984979 22985277 -176644873 - AluSg SINE Alu -13 297 1 545 274 55 92 chr5 22985609 22985989 -176644161 + L2 LINE L2 2945 3310 -3 924 190 11 17 chr5 22987713 22987892 -176642258 + MER52A LTR ERV1 1578 1755 0 3379 193 38 22 chr5 22987892 22988797 -176641353 - L1P4 LINE L1 -728 5438 4533 3011 161 72 2 chr5 22988798 22989368 -176640782 + L1PA16 LINE L1 5547 6156 -10 414 100 0 0 chr5 22989368 22989428 -176640722 + (TA)n Simple_repeat Simple_repeat 1 60 0 238 155 10 117 chr5 22989447 22989506 -176640644 + L1MA8 LINE L1 6180 6225 -66 2175 110 0 10 chr5 22989506 22989807 -176640343 + AluSx SINE Alu 1 298 -14 238 155 10 117 chr5 22989807 22989850 -176640300 + L1MA8 LINE L1 6225 6271 -20 28 0 0 0 chr5 22989867 22989895 -176640255 + AT_rich Low_complexity Low_complexity 1 28 0 614 316 10 0 chr5 22990642 22990851 -176639299 + L1MEc LINE L1 112 322 -6074 1065 193 24 58 chr5 22990862 22991157 -176638993 + L1MEc LINE L1 646 930 -5466 782 298 114 19 chr5 22991253 22991935 -176638215 + L1MEc LINE L1 1115 1861 -4535 483 295 73 91 chr5 22992307 22992868 -176637282 - L2 LINE L2 -67 3246 2687 440 329 20 63 chr5 22992973 22993225 -176636925 - LTR33 LTR ERVL -280 241 1 185 356 69 0 chr5 22993226 22993313 -176636837 + L2 LINE L2 3186 3278 -35 210 363 0 0 chr5 22993630 22993710 -176636440 + L2 LINE L2 3226 3305 -8 2494 44 0 0 chr5 22993777 22994072 -176636078 + AluY SINE Alu 1 295 -16 28 29 0 0 chr5 22994846 22994881 -176635269 + AT_rich Low_complexity Low_complexity 1 35 0 30 59 0 0 chr5 22995791 22995842 -176634308 + AT_rich Low_complexity Low_complexity 1 51 0 374 318 71 6 chr5 22995869 22996039 -176634111 - MIR SINE MIR -74 188 8 1536 121 45 28 chr5 22996919 22997209 -176632941 - L1PA11 LINE L1 0 6174 5880 470 81 0 0 chr5 22997209 22997271 -176632879 + L1P4 LINE L1 5586 5647 -527 744 267 180 66 chr5 22997477 22997904 -176632246 + MLT2F LTR ERVL 186 661 -2 26 50 0 0 chr5 22998652 22998692 -176631458 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr5 22998909 22998940 -176631210 + AT_rich Low_complexity Low_complexity 1 31 0 2056 134 7 3 chr5 22999519 22999824 -176630326 - AluSg SINE Alu -4 306 1 21 82 0 0 chr5 23000174 23000223 -176629927 + AT_rich Low_complexity Low_complexity 1 49 0 387 296 195 6 chr5 23000350 23000509 -176629641 - MER5A DNA MER1_type 0 189 1 360 231 44 0 chr5 23000630 23000721 -176629429 - MIR SINE MIR -57 205 111 257 288 0 0 chr5 23001734 23001807 -176628343 + L1MDa LINE L1 70 142 -6398 2460 42 13 7 chr5 23001918 23002227 -176627923 - AluY SINE Alu 0 311 1 186 43 0 0 chr5 23002307 23002330 -176627820 + (GA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr5 23002755 23002777 -176627373 + AT_rich Low_complexity Low_complexity 1 22 0 1774 135 54 14 chr5 23002955 23003252 -176626898 - AluSg SINE Alu -1 309 1 24 0 0 0 chr5 23003553 23003577 -176626573 + AT_rich Low_complexity Low_complexity 1 24 0 661 285 0 22 chr5 23003756 23003935 -176626215 + MIR SINE MIR 32 206 -56 520 231 240 4 chr5 23004152 23004194 -176625956 - MLT1E1 LTR MaLR -5 649 618 195 42 0 0 chr5 23004194 23004218 -176625932 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 520 231 240 4 chr5 23004218 23004525 -176625625 - MLT1E1 LTR MaLR -36 618 178 304 235 94 0 chr5 23004552 23004637 -176625513 - MLT1E1 LTR MaLR -557 97 5 992 258 79 170 chr5 23004669 23005823 -176624327 - MLT1E1-int LTR MaLR -30 1341 293 307 293 57 13 chr5 23005828 23005985 -176624165 - MLT1E1-int LTR MaLR -1207 164 1 766 327 8 4 chr5 23005996 23006259 -176623891 - MLT1E1 LTR MaLR -8 646 383 703 286 73 8 chr5 23006309 23006554 -176623596 - MLT1E1 LTR MaLR -393 261 1 478 273 121 0 chr5 23006828 23006993 -176623157 + L1ME3A LINE L1 5651 5835 -335 661 153 32 8 chr5 23007411 23007535 -176622615 - LTR54B LTR ERV1 -371 127 1 5378 228 31 21 chr5 23007541 23008843 -176621307 - MER57-int LTR ERV1 -400 7137 5824 763 184 68 21 chr5 23009162 23009352 -176620798 - MER57-int LTR ERV1 -1717 5820 5622 23 33 0 0 chr5 23011117 23011147 -176619003 + AT_rich Low_complexity Low_complexity 1 30 0 292 317 88 19 chr5 23011496 23011701 -176618449 + L2 LINE L2 2944 3162 -151 407 319 39 48 chr5 23012203 23012432 -176617718 + MIR SINE MIR 8 234 -28 23 68 0 0 chr5 23012499 23012543 -176617607 + AT_rich Low_complexity Low_complexity 1 44 0 1710 118 24 0 chr5 23012630 23012876 -176617274 + AluSg SINE Alu 5 256 -54 213 39 0 0 chr5 23012876 23012902 -176617248 + (A)n Simple_repeat Simple_repeat 1 26 0 268 356 55 12 chr5 23013641 23013804 -176616346 + MIR SINE MIR 49 218 -44 25 0 0 0 chr5 23014556 23014581 -176615569 + AT_rich Low_complexity Low_complexity 1 25 0 181 288 30 0 chr5 23014641 23014707 -176615443 - MIR SINE MIR -121 141 74 2046 127 7 0 chr5 23016005 23016313 -176613837 + AluSg SINE Alu 1 310 0 192 111 0 0 chr5 23016573 23016609 -176613541 + (CA)n Simple_repeat Simple_repeat 2 37 0 323 250 134 58 chr5 23016899 23017071 -176613079 - L2 LINE L2 0 3313 3129 844 206 0 7 chr5 23017072 23017227 -176612923 - MLT1B LTR MaLR -1 389 236 2276 197 58 4 chr5 23017229 23017712 -176612438 + LTR22 LTR ERVK 1 509 0 1063 197 75 0 chr5 23017712 23017933 -176612217 - MLT1B LTR MaLR -150 240 3 201 370 49 0 chr5 23018182 23018263 -176611887 - L2 LINE L2 -297 3016 2932 189 0 0 0 chr5 23019326 23019347 -176610803 + (TA)n Simple_repeat Simple_repeat 1 21 0 1140 225 126 30 chr5 23020820 23021153 -176608997 + MLT1A1 LTR MaLR 1 365 0 2530 123 0 3 chr5 23021978 23022343 -176607807 - THE1B LTR MaLR 0 364 1 3825 140 102 25 chr5 23022591 23023652 -176606498 - pTR5 LTR ERV1 0 2606 1524 1282 281 133 8 chr5 23025280 23025793 -176604357 + MER119 DNA MER1_type 7 583 0 235 335 129 31 chr5 23025793 23025987 -176604163 + MIR SINE MIR 24 236 -26 30 83 0 0 chr5 23026539 23026611 -176603539 + AT_rich Low_complexity Low_complexity 1 72 0 31 26 0 0 chr5 23027455 23027493 -176602657 + AT_rich Low_complexity Low_complexity 1 38 0 2009 151 0 0 chr5 23027542 23027847 -176602303 - AluSx SINE Alu -7 305 1 525 280 89 48 chr5 23028003 23028274 -176601876 + L1MD2 LINE L1 5860 6141 -218 302 343 22 14 chr5 23028283 23028429 -176601721 + L1MC4a LINE L1 6202 7807 -1 27 49 0 0 chr5 23029037 23029078 -176601072 + AT_rich Low_complexity Low_complexity 1 41 0 2262 93 0 0 chr5 23029124 23029415 -176600735 + AluSg SINE Alu 1 291 -19 21 36 0 0 chr5 23029429 23029457 -176600693 + AT_rich Low_complexity Low_complexity 1 28 0 207 205 39 13 chr5 23029995 23030073 -176600077 + (TA)n Simple_repeat Simple_repeat 2 81 0 2300 59 10 3 chr5 23030202 23030490 -176599660 + AluY SINE Alu 3 292 -19 699 230 40 50 chr5 23030964 23031164 -176598986 + MER49 LTR ERV1 1 198 -725 252 297 11 0 chr5 23031170 23031261 -176598889 - L1MC4 LINE L1 -1339 6703 6612 234 205 84 12 chr5 23031191 23031274 -176598876 + L1MC4 LINE L1 6615 6703 -1339 * 378 177 0 13 chr5 23031284 23031363 -176598787 + MER49 LTR ERV1 185 262 -661 1208 274 20 15 chr5 23031404 23031747 -176598403 + MER4D LTR ERV1 549 893 -10 2083 149 0 0 chr5 23032699 23033042 -176597108 - AluSx SINE Alu 0 312 4 247 321 9 18 chr5 23033296 23033405 -176596745 - MER34 LTR ERV1 -3 539 432 211 229 0 0 chr5 23034067 23034115 -176596035 + (TA)n Simple_repeat Simple_repeat 1 48 0 304 299 65 60 chr5 23034504 23034688 -176595462 + L1MEd LINE L1 1011 1195 -4924 269 301 27 75 chr5 23034941 23035127 -176595023 - L2 LINE L2 -25 3288 3112 1387 201 28 45 chr5 23035309 23035662 -176594488 - MLT1A1 LTR MaLR -15 350 4 674 284 111 24 chr5 23035663 23036004 -176594146 + MLT1G LTR MaLR 136 506 -84 236 303 0 0 chr5 23036614 23036680 -176593470 + HAL1b LINE L1 421 486 -862 525 140 11 5 chr5 23036783 23036874 -176593276 + MSTB LTR MaLR 2 82 -344 496 196 20 10 chr5 23036882 23036984 -176593166 + L1PB4 LINE L1 5687 5789 -367 232 186 0 0 chr5 23036990 23037033 -176593117 + L1MC4 LINE L1 6658 6700 -1342 301 283 18 26 chr5 23037054 23037167 -176592983 - L1MC4 LINE L1 -1339 6703 6592 672 111 16 47 chr5 23037197 23037455 -176592695 + (TA)n Simple_repeat Simple_repeat 1 249 0 251 209 0 50 chr5 23037482 23037621 -176592529 + (TA)n Simple_repeat Simple_repeat 1 132 0 1874 162 11 35 chr5 23037630 23038006 -176592144 + L1PB4 LINE L1 5789 6155 -1 274 275 0 0 chr5 23038023 23038109 -176592041 + L1MEd LINE L1 2672 2757 -3372 225 0 0 0 chr5 23038960 23038985 -176591165 + (A)n Simple_repeat Simple_repeat 1 25 0 261 98 0 0 chr5 23040274 23040315 -176589835 + (TG)n Simple_repeat Simple_repeat 2 42 0 5081 36 0 3 chr5 23040415 23041028 -176589122 + L1PA4 LINE L1 5545 6155 0 231 180 11 22 chr5 23041380 23041469 -176588681 + (TA)n Simple_repeat Simple_repeat 2 89 0 291 336 135 45 chr5 23041534 23041846 -176588304 - L2 LINE L2 -421 2893 2554 2065 115 54 0 chr5 23041901 23042196 -176587954 + AluSq SINE Alu 1 311 -2 293 211 87 124 chr5 23042631 23042792 -176587358 + MIR SINE MIR 18 172 -90 282 125 0 0 chr5 23042831 23042879 -176587271 + (TGGA)n Simple_repeat Simple_repeat 1 48 0 357 82 0 0 chr5 23042880 23042929 -176587221 + (TAGG)n Simple_repeat Simple_repeat 2 50 0 251 200 50 0 chr5 23043840 23043900 -176586250 + CT-rich Low_complexity Low_complexity 1 63 0 656 177 7 0 chr5 23044091 23044232 -176585918 + (TAGA)n Simple_repeat Simple_repeat 1 142 0 380 381 122 17 chr5 23044248 23044473 -176585677 + L2 LINE L2 2728 2928 -385 2527 123 0 18 chr5 23044473 23044855 -176585295 + THE1C LTR MaLR 1 375 0 380 381 122 17 chr5 23044855 23045157 -176584993 + L2 LINE L2 2928 3305 -8 562 185 0 0 chr5 23045341 23045449 -176584701 - L1MA3 LINE L1 0 6305 6198 1966 125 14 54 chr5 23045449 23045802 -176584348 + THE1B LTR MaLR 1 339 -25 267 152 0 0 chr5 23045841 23045887 -176584263 + (TA)n Simple_repeat Simple_repeat 1 46 0 10419 64 1 1 chr5 23045887 23048235 -176581915 - L1PA6 LINE L1 -15 6139 3793 5042 90 4 6 chr5 23048226 23049365 -176580785 - L1PA6 LINE L1 -2741 3405 2367 * 6834 79 3 8 chr5 23049430 23050369 -176579781 + L1P LINE L1 1536 2470 -3676 274 149 0 15 chr5 23050369 23050423 -176579727 + THE1A LTR MaLR 317 355 0 3624 88 8 4 chr5 23050423 23050925 -176579225 + THE1A-int LTR MaLR 1 504 -1076 1566 179 7 27 chr5 23051107 23051322 -176578828 + AluJb SINE Alu 1 210 -102 1893 117 4 0 chr5 23051322 23051596 -176578554 - AluY SINE Alu -36 275 1 1566 179 7 27 chr5 23051596 23051677 -176578473 + AluJb SINE Alu 210 291 -21 1432 247 87 30 chr5 23051821 23052291 -176577859 - MLT1D LTR MaLR 0 505 9 2165 182 52 28 chr5 23052468 23052934 -176577216 - L1MC1 LINE L1 -4 6329 5853 239 386 82 22 chr5 23053062 23053246 -176576904 + L2 LINE L2 1169 1363 -1951 196 330 88 11 chr5 23053396 23053487 -176576663 + L2 LINE L2 1609 1706 -1608 565 349 64 35 chr5 23053627 23054140 -176576010 + L2 LINE L2 1928 2455 -859 213 304 111 22 chr5 23054139 23054274 -176575876 - MIR SINE MIR -24 238 92 * 257 329 84 17 chr5 23054331 23054568 -176575582 - MARNA DNA Mariner -31 555 303 838 188 12 24 chr5 23054621 23054811 -176575339 + AluJo SINE Alu 120 307 0 206 349 81 15 chr5 23055497 23055695 -176574455 - MIR SINE MIR 0 262 52 22 0 0 0 chr5 23056070 23056092 -176574058 + AT_rich Low_complexity Low_complexity 1 22 0 223 333 40 0 chr5 23056707 23056782 -176573368 + L2 LINE L2 3224 3301 -12 24 0 0 0 chr5 23056904 23056928 -176573222 + AT_rich Low_complexity Low_complexity 1 24 0 1560 240 57 14 chr5 23056986 23057423 -176572727 - MER31B LTR ERV1 -10 456 1 21 36 0 0 chr5 23057782 23057810 -176572340 + AT_rich Low_complexity Low_complexity 1 28 0 293 311 27 40 chr5 23058867 23059015 -176571135 + L1MC5 LINE L1 7720 7865 -96 23 54 0 0 chr5 23059053 23059090 -176571060 + AT_rich Low_complexity Low_complexity 1 37 0 641 194 8 0 chr5 23059098 23059227 -176570923 - MER39B LTR ERV1 -382 271 142 3738 189 20 33 chr5 23059228 23060103 -176570047 - L1MA4 LINE L1 -225 7494 6623 3179 224 40 4 chr5 23060100 23060931 -176569219 - L1MA4 LINE L1 -2481 5084 4224 * 334 127 16 16 chr5 23060929 23060992 -176569158 - L1MA4 LINE L1 -4185 3380 3318 * 277 130 19 0 chr5 23060994 23061048 -176569102 + L1M1 LINE L1 3303 3357 -4208 6878 245 56 83 chr5 23061073 23061723 -176568427 - L1MA4 LINE L1 -4272 3293 2627 2858 6 0 3 chr5 23061723 23062042 -176568108 - AluYb8 SINE Alu 0 318 1 6878 245 56 83 chr5 23062042 23064312 -176565838 - L1MA4 LINE L1 -4938 2627 13 199 243 40 40 chr5 23064402 23064476 -176565674 + L2 LINE L2 3178 3251 -21 27 29 0 0 chr5 23064477 23064511 -176565639 + AT_rich Low_complexity Low_complexity 1 34 0 605 295 90 33 chr5 23064728 23065060 -176565090 - L2 LINE L2 -103 3210 2860 989 181 67 122 chr5 23065513 23065873 -176564277 + MER2 DNA MER2_type 4 343 -1 1694 243 99 11 chr5 23066151 23066625 -176563525 + L1ME1 LINE L1 5559 6074 -92 28 48 0 0 chr5 23067250 23067292 -176562858 + AT_rich Low_complexity Low_complexity 1 42 0 1681 262 30 19 chr5 23067786 23068251 -176561899 + MER70A LTR ERVL 1 470 -2 849 87 0 0 chr5 23068845 23068960 -176561190 - L1MA3 LINE L1 -11 6294 6180 255 31 0 0 chr5 23069137 23069169 -176560981 + (TGG)n Simple_repeat Simple_repeat 2 33 0 499 328 81 39 chr5 23069258 23069615 -176560535 - LTR16C LTR ERVL -56 435 64 1185 255 57 20 chr5 23069632 23069981 -176560169 - MLT1A2 LTR MaLR -2 372 11 343 289 18 18 chr5 23070037 23070151 -176559999 - MIR SINE MIR -76 186 73 1202 215 54 4 chr5 23070594 23070854 -176559296 + L1M1 LINE L1 15 287 -7278 437 202 0 0 chr5 23070847 23070936 -176559214 + L1M1 LINE L1 768 856 -6709 * 1663 143 24 57 chr5 23070941 23071277 -176558873 - THE1B LTR MaLR -35 329 5 7215 118 25 7 chr5 23071279 23072341 -176557809 - THE1B-int LTR MaLR 0 1580 499 5550 64 5 0 chr5 23072447 23073446 -176556704 + L1P2 LINE L1 4646 5649 -505 1574 161 0 0 chr5 23073586 23073829 -176556321 - AluSq SINE Alu -70 243 1 367 316 128 26 chr5 23073868 23074219 -176555931 - L1M4 LINE L1 -3613 2533 2147 200 108 0 27 chr5 23074312 23074349 -176555801 + (GA)n Simple_repeat Simple_repeat 1 36 0 29 28 0 0 chr5 23074565 23074601 -176555549 + AT_rich Low_complexity Low_complexity 1 36 0 2041 96 0 0 chr5 23074603 23074884 -176555266 - L1PA14 LINE L1 -14 6147 5867 1810 164 0 3 chr5 23075056 23075348 -176554802 - AluJb SINE Alu -15 297 7 246 313 90 22 chr5 23076010 23076144 -176554006 + MIR SINE MIR 64 206 -56 264 143 43 0 chr5 23077020 23077090 -176553060 + (TA)n Simple_repeat Simple_repeat 1 73 0 222 91 0 0 chr5 23077091 23077124 -176553026 + (TG)n Simple_repeat Simple_repeat 2 34 0 1485 276 103 43 chr5 23077457 23078201 -176551949 + LTR50 LTR ERVL 1 789 -6 1988 95 0 0 chr5 23078607 23078869 -176551281 + AluSc SINE Alu 31 292 -17 522 258 66 20 chr5 23080694 23080892 -176549258 + MER3 DNA MER1_type 3 209 0 1319 224 31 14 chr5 23081000 23081286 -176548864 - AluJb SINE Alu -9 303 13 346 94 31 0 chr5 23081413 23081477 -176548673 + GA-rich Low_complexity Low_complexity 3 68 0 873 214 143 43 chr5 23081648 23081961 -176548189 + MLT1A2 LTR MaLR 27 467 0 23 0 0 0 chr5 23083208 23083231 -176546919 + AT_rich Low_complexity Low_complexity 1 23 0 2035 111 14 7 chr5 23083699 23083987 -176546163 + AluSx SINE Alu 3 292 -20 243 61 0 0 chr5 23084303 23084336 -176545814 + (TG)n Simple_repeat Simple_repeat 2 34 0 326 338 90 23 chr5 23085665 23085931 -176544219 + HAL1 LINE L1 1368 1651 -856 1091 197 90 79 chr5 23086128 23086484 -176543666 - MLT1A1 LTR MaLR -5 360 1 7561 138 49 34 chr5 23086535 23087844 -176542306 - THE1-int LTR MaLR -85 1495 168 3948 188 79 22 chr5 23087847 23088847 -176541303 - MLT1A1-int LTR MaLR -295 1356 180 694 184 8 0 chr5 23088848 23088973 -176541177 + THE1C LTR MaLR 250 375 0 21 82 0 0 chr5 23089939 23089988 -176540162 + AT_rich Low_complexity Low_complexity 1 49 0 1631 240 32 38 chr5 23090438 23090969 -176539181 - L1MA9 LINE L1 -38 6274 5746 720 200 73 0 chr5 23091077 23091242 -176538908 - L1MA9 LINE L1 -541 5771 5595 230 0 33 0 chr5 23091242 23091272 -176538878 + (TTA)n Simple_repeat Simple_repeat 3 33 0 304 133 0 0 chr5 23091272 23091317 -176538833 - L1PA4 LINE L1 -18 6137 6093 672 13 0 0 chr5 23091317 23091395 -176538755 + L1P2 LINE L1 5706 5783 -372 373 210 0 12 chr5 23091387 23091468 -176538682 - L1MA9 LINE L1 -693 5619 5540 * 1214 209 11 0 chr5 23091475 23091753 -176538397 + L1 LINE L1 3398 3678 -2468 23 0 0 0 chr5 23091761 23091784 -176538366 + AT_rich Low_complexity Low_complexity 1 23 0 1767 271 128 12 chr5 23093032 23093823 -176536327 + L1MDa LINE L1 499 1527 -5013 2056 89 3 71 chr5 23094661 23094997 -176535153 + AluSp SINE Alu 1 313 0 21 0 0 0 chr5 23095412 23095433 -176534717 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 23096061 23096084 -176534066 + AT_rich Low_complexity Low_complexity 1 23 0 207 114 0 0 chr5 23296990 23297025 -176333125 + (ATG)n Simple_repeat Simple_repeat 2 36 0 1867 120 73 0 chr5 23297144 23297419 -176332731 + AluSc SINE Alu 1 295 -14 616 295 54 75 chr5 23297467 23297945 -176332205 - MLT1H LTR MaLR -57 492 25 754 240 211 71 chr5 23298266 23298769 -176331381 + MLT1F1 LTR MaLR 1 567 0 24 32 0 0 chr5 23299138 23299169 -176330981 + AT_rich Low_complexity Low_complexity 1 31 0 28 99 0 0 chr5 23299263 23299354 -176330796 + AT_rich Low_complexity Low_complexity 1 91 0 22 0 0 0 chr5 23299820 23299842 -176330308 + AT_rich Low_complexity Low_complexity 1 22 0 640 237 5 0 chr5 23299842 23300057 -176330093 - AluYa5 SINE Alu 0 311 96 2718 162 100 42 chr5 23300163 23300751 -176329399 + L1M1 LINE L1 1814 2435 -5130 7552 48 1 1 chr5 23300757 23302427 -176327723 + L1PA5 LINE L1 4439 6108 -46 5588 128 9 7 chr5 23302527 23304010 -176326140 + L1PA13 LINE L1 4704 6163 0 189 0 0 0 chr5 23304528 23304549 -176325601 + (T)n Simple_repeat Simple_repeat 1 21 0 22 35 0 0 chr5 23304999 23305028 -176325122 + AT_rich Low_complexity Low_complexity 1 29 0 27 49 0 0 chr5 23305596 23305637 -176324513 + AT_rich Low_complexity Low_complexity 1 41 0 24 32 0 0 chr5 23305749 23305780 -176324370 + AT_rich Low_complexity Low_complexity 1 31 0 304 244 31 75 chr5 23305905 23306065 -176324085 - L1MEc LINE L1 -5066 1330 1178 237 288 59 20 chr5 23306087 23306240 -176323910 - L1M2c LINE L1 -4809 1980 1822 275 203 0 0 chr5 23306407 23306466 -176323684 - MLT2C1 LTR ERVL 0 520 462 290 87 22 0 chr5 23306478 23306524 -176323626 + (GA)n Simple_repeat Simple_repeat 1 47 0 1512 236 20 9 chr5 23306529 23306873 -176323277 - MLT2C1 LTR ERVL -48 349 2 511 271 24 24 chr5 23307879 23308015 -176322135 - L1MA10 LINE L1 -41 6293 6155 243 61 0 0 chr5 23308015 23308048 -176322102 + (TG)n Simple_repeat Simple_repeat 2 34 0 511 271 24 24 chr5 23308048 23308081 -176322069 - L1MA10 LINE L1 -178 6156 6124 6876 48 14 8 chr5 23308106 23309065 -176321085 + L1PA5 LINE L1 5183 6146 -8 2382 140 12 22 chr5 23309068 23309481 -176320669 + L1P4 LINE L1 5315 5723 -443 2912 218 19 8 chr5 23309495 23310138 -176320012 - L1MB1 LINE L1 -160 6029 5380 266 307 78 30 chr5 23310309 23310475 -176319675 - L2 LINE L2 -1305 2009 1836 275 302 28 0 chr5 23310704 23310810 -176319340 - HsTC2 DNA Tc2 -1786 112 4 288 248 26 17 chr5 23315038 23315155 -176314995 + (TA)n Simple_repeat Simple_repeat 1 118 0 1238 213 109 30 chr5 23316032 23316370 -176313780 - MLT1A1 LTR MaLR 0 365 1 335 143 31 10 chr5 23316560 23316658 -176313492 + (TA)n Simple_repeat Simple_repeat 1 100 0 183 387 16 0 chr5 23317124 23317186 -176312964 + L2 LINE L2 2207 2269 -1045 21 0 0 0 chr5 23317247 23317268 -176312882 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 23317357 23317378 -176312772 + AT_rich Low_complexity Low_complexity 1 21 0 994 174 20 49 chr5 23317659 23317906 -176312244 + L1MC1 LINE L1 6094 6333 0 518 161 73 3 chr5 23319488 23319599 -176310551 - L1MA9 LINE L1 -18 6282 6166 7842 208 33 8 chr5 23319982 23321372 -176308778 + L1M1 LINE L1 19 1453 -6112 350 0 44 0 chr5 23321372 23321417 -176308733 + (AATAG)n Simple_repeat Simple_repeat 2 48 0 7842 208 33 8 chr5 23321417 23321559 -176308591 + L1M1 LINE L1 1453 1590 -5975 703 230 52 17 chr5 23321801 23321975 -176308175 + MER20 DNA MER1_type 2 181 -38 3997 191 8 0 chr5 23325767 23326527 -176303623 - L1P LINE L1 -3457 2689 1924 6686 189 80 11 chr5 23326544 23326715 -176303435 + L1P LINE L1 3057 3215 -2931 2098 100 0 7 chr5 23326715 23327024 -176303126 + AluSc SINE Alu 1 307 0 6686 189 80 11 chr5 23327024 23328293 -176301857 + L1P LINE L1 3215 4605 -1541 3559 71 2 0 chr5 23328293 23328745 -176301405 + MLT2A2 LTR ERVL 1 453 0 6686 189 80 11 chr5 23328745 23328780 -176301370 + L1P LINE L1 4605 4636 -1510 3956 171 30 52 chr5 23329146 23330026 -176300124 - L1MB3 LINE L1 -2 6181 5322 1797 131 7 18 chr5 23331625 23331946 -176298204 + AluSx SINE Alu 4 321 0 790 219 122 15 chr5 23332286 23332512 -176297638 + AluJo SINE Alu 66 312 0 1764 152 18 11 chr5 23332588 23332900 -176297250 - AluSx SINE Alu 0 314 1 408 336 92 37 chr5 23332942 23333269 -176296881 - L1ME LINE L1 -327 5794 5450 241 327 29 0 chr5 23334016 23334120 -176296030 + L2 LINE L2 1916 2022 -1292 1907 139 7 19 chr5 23334617 23334926 -176295224 - Charlie3 DNA MER1_type -4 2706 2402 11542 173 15 7 chr5 23335026 23338117 -176292033 - L1PA12 LINE L1 -94 6074 2958 237 242 0 0 chr5 23338187 23338253 -176291897 - L1ME LINE L1 -348 5822 5757 1794 167 44 101 chr5 23338956 23339411 -176290739 + MSTB1 LTR MaLR 4 432 0 24 53 0 0 chr5 23340148 23340186 -176289964 + AT_rich Low_complexity Low_complexity 1 38 0 237 268 0 14 chr5 23340384 23340455 -176289695 + (TA)n Simple_repeat Simple_repeat 2 71 0 1298 231 19 53 chr5 23341070 23341446 -176288704 + MLT1A1 LTR MaLR 1 363 -2 208 286 22 11 chr5 23342014 23342105 -176288045 + (TA)n Simple_repeat Simple_repeat 1 92 0 24 77 0 0 chr5 23342293 23342345 -176287805 + AT_rich Low_complexity Low_complexity 1 52 0 22 70 0 0 chr5 23343424 23343467 -176286683 + AT_rich Low_complexity Low_complexity 1 43 0 2840 10 0 0 chr5 23343494 23343806 -176286344 + AluYb8 SINE Alu 1 312 -6 341 229 0 0 chr5 23344497 23344558 -176285592 - MER8 DNA MER2_type 0 239 179 1318 187 142 89 chr5 23344563 23344980 -176285170 + Tigger2 DNA MER2_type 2280 2718 0 27 0 0 0 chr5 23346016 23346043 -176284107 + AT_rich Low_complexity Low_complexity 1 27 0 471 72 0 0 chr5 23346751 23346820 -176283330 + AluS SINE Alu 1 69 -243 1396 193 23 36 chr5 23346876 23347173 -176282977 - MER61A LTR ERV1 0 343 49 1927 70 12 12 chr5 23347173 23347431 -176282719 - AluSq SINE Alu -55 258 1 2229 211 17 6 chr5 23347439 23347908 -176282242 - ERVL LTR ERVL -4525 1239 766 435 62 0 0 chr5 23347953 23348019 -176282131 + Alu SINE Alu 246 336 0 184 80 0 0 chr5 23348019 23348044 -176282106 + (GAAAA)n Simple_repeat Simple_repeat 2 180 0 3024 230 22 18 chr5 23348044 23348719 -176281431 + ERVL LTR ERVL 1235 1912 -3852 216 97 0 0 chr5 23348719 23348750 -176281400 + (CA)n Simple_repeat Simple_repeat 2 32 0 291 157 0 0 chr5 23348767 23348818 -176281332 + T-rich Low_complexity Low_complexity 1 51 0 26 69 0 35 chr5 23349660 23349747 -176280403 + AT_rich Low_complexity Low_complexity 1 84 0 36 40 0 0 chr5 23349987 23350037 -176280113 + AT_rich Low_complexity Low_complexity 1 50 0 1397 246 66 0 chr5 23350893 23351242 -176278908 + MER67D LTR ERV1 5 376 -138 1756 159 55 0 chr5 23351400 23351689 -176278461 - AluSg SINE Alu -3 307 3 26 0 0 0 chr5 23351699 23351725 -176278425 + AT_rich Low_complexity Low_complexity 1 26 0 2953 96 41 2 chr5 23352074 23352510 -176277640 - MLT2A2 LTR ERVL 0 453 1 26 82 0 0 chr5 23352597 23352658 -176277492 + AT_rich Low_complexity Low_complexity 1 61 0 619 298 64 34 chr5 23353221 23353516 -176276634 - LTR16C LTR ERVL 0 491 188 15621 112 47 23 chr5 23353639 23356007 -176274143 + Charlie3 DNA MER1_type 1 2424 -286 27 49 0 0 chr5 23357067 23357108 -176273042 + AT_rich Low_complexity Low_complexity 1 41 0 216 196 11 22 chr5 23357990 23358082 -176272068 + (TA)n Simple_repeat Simple_repeat 2 92 0 540 130 16 49 chr5 23358097 23358282 -176271868 + (TA)n Simple_repeat Simple_repeat 2 180 0 230 242 22 22 chr5 23358299 23358390 -176271760 - L1MC4 LINE L1 -1338 6704 6614 225 146 0 0 chr5 23358394 23358435 -176271715 + LTR66 LTR ERVL 398 438 -172 243 156 13 52 chr5 23358456 23358533 -176271617 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 25 0 0 0 chr5 23359070 23359095 -176271055 + AT_rich Low_complexity Low_complexity 1 25 0 232 188 94 16 chr5 23359133 23359197 -176270953 - MLT1H LTR MaLR 0 549 481 2314 68 0 7 chr5 23359379 23359671 -176270479 - AluY SINE Alu -19 292 3 265 277 66 36 chr5 23359722 23359859 -176270291 - MLT1H LTR MaLR -406 143 3 244 302 107 65 chr5 23359919 23360134 -176270016 + LTR16A LTR ERVL 25 248 -202 398 237 58 64 chr5 23361432 23361605 -176268545 - MLT1H LTR MaLR -375 174 3 263 356 25 0 chr5 23361769 23361887 -176268263 + L2 LINE L2 2342 2462 -852 2491 20 0 7 chr5 23362366 23362663 -176267487 + AluY SINE Alu 1 295 -16 308 373 8 0 chr5 23363443 23363561 -176266589 + L2 LINE L2 2226 2344 -970 419 240 64 8 chr5 23363609 23363734 -176266416 - MLT1G LTR MaLR -2 588 457 * 618 308 97 68 chr5 23363733 23364095 -176266055 - MLT1G LTR MaLR -176 354 1 185 0 40 0 chr5 23364243 23364268 -176265882 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 30 59 0 0 chr5 23364662 23364713 -176265437 + AT_rich Low_complexity Low_complexity 1 51 0 210 279 35 35 chr5 23367197 23367283 -176262867 + L2 LINE L2 3185 3270 -2 23 33 0 0 chr5 23367493 23367523 -176262627 + AT_rich Low_complexity Low_complexity 1 30 0 55 62 0 0 chr5 23367941 23368038 -176262112 + AT_rich Low_complexity Low_complexity 1 97 0 249 250 0 38 chr5 23369123 23369203 -176260947 - L1MC4 LINE L1 -1330 6712 6636 1021 210 63 52 chr5 23369214 23369500 -176260650 - AluJb SINE Alu -13 289 1 445 284 35 21 chr5 23371969 23372110 -176258040 + MIR SINE MIR 3 145 -117 278 337 121 33 chr5 23372217 23372490 -176257660 + MLT1J2 LTR MaLR 113 409 -41 241 261 65 0 chr5 23372535 23372627 -176257523 + MIR SINE MIR 137 234 -28 26 50 0 0 chr5 23373304 23373344 -176256806 + AT_rich Low_complexity Low_complexity 1 40 0 1298 180 176 28 chr5 23373443 23373876 -176256274 + LTR54B LTR ERV1 1 497 -1 773 158 80 34 chr5 23374519 23374828 -176255322 + MER52A-int LTR ERV1 4298 4690 -1256 403 57 0 0 chr5 23374832 23374885 -176255265 + MER52A-int LTR ERV1 5976 6028 -1177 * 1148 144 64 5 chr5 23374883 23375070 -176255080 + MER52A-int LTR ERV1 6892 7089 -2 296 224 0 40 chr5 23375072 23375148 -176255002 + MER52A LTR ERV1 1 73 -1682 6750 204 139 9 chr5 23375764 23377291 -176252859 + MER52A LTR ERV1 21 1746 -9 191 282 154 0 chr5 23377624 23377680 -176252470 + MIR SINE MIR 134 180 -82 243 0 0 0 chr5 23377680 23377707 -176252443 + (CA)n Simple_repeat Simple_repeat 2 28 0 191 282 154 0 chr5 23377707 23377760 -176252390 + MIR SINE MIR 180 260 -2 22 0 0 0 chr5 23378491 23378513 -176251637 + AT_rich Low_complexity Low_complexity 1 22 0 3003 177 37 6 chr5 23378840 23379462 -176250688 + L1MA4 LINE L1 5658 6298 -2 2024 176 37 30 chr5 23379660 23380210 -176249940 + MLT2A2 LTR ERVL 1 554 0 1507 206 26 84 chr5 23380210 23380607 -176249543 - MER67D LTR ERV1 -89 425 57 318 26 0 0 chr5 23380607 23380646 -176249504 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1507 206 26 84 chr5 23380646 23380700 -176249450 - MER67D LTR ERV1 -457 57 1 1148 201 94 4 chr5 23380876 23381120 -176249030 + AluJo SINE Alu 17 282 -30 1788 150 29 0 chr5 23381124 23381449 -176248701 - AluSx SINE Alu 0 333 1 22 56 0 0 chr5 23381759 23381795 -176248355 + AT_rich Low_complexity Low_complexity 1 36 0 373 322 24 29 chr5 23381956 23382164 -176247986 - L1M4 LINE L1 -1326 4820 4614 376 340 26 13 chr5 23382327 23382483 -176247667 + L2 LINE L2 3154 3311 -2 240 86 0 0 chr5 23383037 23383072 -176247078 + (CAT)n Simple_repeat Simple_repeat 1 35 0 822 229 0 0 chr5 23383784 23383937 -176246213 + FRAM SINE Alu 1 153 -23 909 301 81 22 chr5 23383941 23384460 -176245690 - L2 LINE L2 -534 2780 2182 541 285 57 45 chr5 23384853 23385145 -176245005 + MLT1E1 LTR MaLR 275 633 -21 1515 170 131 6 chr5 23385149 23385504 -176244646 - MSTA LTR MaLR 0 428 1 2032 107 6 31 chr5 23385695 23386014 -176244136 - AluY SINE Alu 0 311 1 245 278 22 33 chr5 23386605 23386695 -176243455 + LTR16A1 LTR ERVL 366 454 -3 340 275 11 0 chr5 23386697 23386788 -176243362 - L2 LINE L2 -767 2547 2456 327 233 0 0 chr5 23388862 23388922 -176241228 + L1MA2 LINE L1 1834 1893 -5672 2570 143 9 83 chr5 23388926 23389176 -176240974 + L1MA2 LINE L1 2653 2839 -4726 1957 143 0 3 chr5 23389176 23389469 -176240681 - AluSq SINE Alu -21 292 1 2570 143 9 83 chr5 23389469 23389786 -176240364 + L1MA2 LINE L1 2839 3178 -4387 11295 179 94 18 chr5 23389795 23394085 -176236065 + L1PB1 LINE L1 1 5168 -1694 189 0 0 0 chr5 23394085 23394106 -176236044 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 11295 179 94 18 chr5 23394106 23394764 -176235386 + L1PB1 LINE L1 5168 5775 -1087 5033 112 19 29 chr5 23394756 23395249 -176234901 + L1PB1 LINE L1 6052 6535 -332 * 2711 31 0 3 chr5 23395249 23395568 -176234582 + AluYb8 SINE Alu 1 318 0 5033 112 19 29 chr5 23395568 23395893 -176234257 + L1PB1 LINE L1 6535 6862 -5 10601 186 32 19 chr5 23395904 23399101 -176231049 + L1MA2 LINE L1 3169 6322 -1401 2177 127 0 0 chr5 23399101 23399408 -176230742 + AluSg SINE Alu 1 307 -3 10601 186 32 19 chr5 23399408 23400650 -176229500 + L1MA2 LINE L1 6322 7705 -18 2098 82 0 36 chr5 23400650 23400956 -176229194 + AluY SINE Alu 1 295 -16 26 30 0 0 chr5 23401055 23401088 -176229062 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr5 23401211 23401235 -176228915 + AT_rich Low_complexity Low_complexity 1 24 0 1742 215 90 35 chr5 23401767 23402246 -176227904 + MLT1D LTR MaLR 1 505 0 27 49 0 0 chr5 23402249 23402290 -176227860 + AT_rich Low_complexity Low_complexity 1 41 0 1813 152 53 22 chr5 23402292 23402648 -176227502 - L1PA16 LINE L1 -9 6157 5791 594 305 81 40 chr5 23404205 23404583 -176225567 - MLT1L LTR MaLR -8 607 209 1772 110 3 51 chr5 23404583 23404875 -176225275 - AluSx SINE Alu -34 278 1 594 305 81 40 chr5 23404875 23404916 -176225234 - MLT1L LTR MaLR -406 209 171 322 289 146 29 chr5 23405099 23405338 -176224812 - L1MEc LINE L1 -4816 1494 1228 317 308 51 19 chr5 23405360 23405516 -176224634 - L1MEc LINE L1 -4968 1151 991 5922 127 88 67 chr5 23405818 23407787 -176222363 - pTR5 LTR ERV1 0 2438 741 2428 197 22 15 chr5 23409986 23410524 -176219626 - L1MC3 LINE L1 -7 7778 7237 469 155 32 75 chr5 23410528 23410785 -176219365 + (TATAG)n Simple_repeat Simple_repeat 1 246 0 229 122 68 0 chr5 23410997 23411071 -176219079 + (TTATA)n Simple_repeat Simple_repeat 1 79 0 31 58 0 0 chr5 23411330 23411382 -176218768 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr5 23411550 23411572 -176218578 + AT_rich Low_complexity Low_complexity 1 22 0 184 197 13 13 chr5 23411897 23411973 -176218177 + (TA)n Simple_repeat Simple_repeat 2 77 0 258 185 0 31 chr5 23412345 23412410 -176217740 + (TAAA)n Simple_repeat Simple_repeat 1 63 0 483 325 90 62 chr5 23413233 23413766 -176216384 + ERVL LTR ERVL 906 1453 -4311 1516 123 58 0 chr5 23413931 23414192 -176215958 - L1MA5A LINE L1 -4 6293 6018 313 92 0 46 chr5 23414406 23414453 -176215697 + (TTTTTA)n Simple_repeat Simple_repeat 3 48 -16 6140 10 0 0 chr5 23414453 23415146 -176215004 - L1PA3 LINE L1 0 6155 5463 313 92 0 46 chr5 23415146 23415163 -176214987 + (TTTTTA)n Simple_repeat Simple_repeat 48 64 0 213 222 0 0 chr5 23415297 23415360 -176214790 + (CATA)n Simple_repeat Simple_repeat 2 64 0 192 40 0 0 chr5 23415360 23415385 -176214765 + (TG)n Simple_repeat Simple_repeat 2 26 0 276 270 144 0 chr5 23416537 23416648 -176213502 - L1ME LINE L1 -433 5688 5562 25 0 0 0 chr5 23416839 23416864 -176213286 + AT_rich Low_complexity Low_complexity 1 25 0 228 133 89 0 chr5 23416876 23416921 -176213229 + L2 LINE L2 3265 3313 0 21 0 0 0 chr5 23419025 23419046 -176211104 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 23419103 23419125 -176211025 + AT_rich Low_complexity Low_complexity 1 22 0 1751 162 33 16 chr5 23419467 23420190 -176209960 + L1PA14 LINE L1 1 1895 -4892 * 14442 211 33 11 chr5 23420188 23421852 -176208298 + L1PA14 LINE L1 2614 4240 -2557 255 79 0 0 chr5 23421852 23421890 -176208260 + (CA)n Simple_repeat Simple_repeat 2 39 0 14442 211 33 11 chr5 23421890 23423207 -176206943 + L1PA14 LINE L1 4240 5680 -1117 2125 100 4 0 chr5 23423207 23423507 -176206643 + AluY SINE Alu 1 301 0 14442 211 33 11 chr5 23423507 23423883 -176206267 + L1PA14 LINE L1 5680 6046 -751 1567 179 21 3 chr5 23423884 23424169 -176205981 + AluSq SINE Alu 1 290 -23 2871 148 9 0 chr5 23424169 23424621 -176205529 + L1PA14 LINE L1 6144 6599 -213 2138 150 22 19 chr5 23424622 23424983 -176205167 - THE1B LTR MaLR 0 364 3 3885 100 0 0 chr5 23424985 23425497 -176204653 - THE1B-int LTR MaLR 0 1580 1069 41 21 0 0 chr5 23425655 23425703 -176204447 + AT_rich Low_complexity Low_complexity 1 48 0 1710 172 40 0 chr5 23425764 23426061 -176204089 + AluJb SINE Alu 1 309 -3 1964 74 0 0 chr5 23426410 23426689 -176203461 + AluY SINE Alu 39 317 0 1924 123 5 115 chr5 23427046 23427420 -176202730 + MER1B DNA MER1_type 3 335 -4 388 93 27 0 chr5 23428450 23428525 -176201625 + (TA)n Simple_repeat Simple_repeat 2 78 0 683 147 202 23 chr5 23428525 23428654 -176201496 + AluSg/x SINE Alu 135 286 -24 21 0 0 0 chr5 23428677 23428698 -176201452 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 23429878 23429900 -176200250 + AT_rich Low_complexity Low_complexity 1 22 0 713 288 5 26 chr5 23430126 23430317 -176199833 + Tigger3(Golem) DNA MER2_type 1 187 -2842 208 231 22 66 chr5 23431213 23431304 -176198846 + MIR SINE MIR 122 208 -54 5174 223 27 26 chr5 23432246 23434687 -176195463 - L1MC1 LINE L1 -9 6324 3884 27 29 0 0 chr5 23435271 23435305 -176194845 + AT_rich Low_complexity Low_complexity 1 34 0 219 36 0 0 chr5 23435864 23435892 -176194258 + (TG)n Simple_repeat Simple_repeat 2 29 0 1310 171 12 4 chr5 23436540 23436786 -176193364 - L1MA8 LINE L1 -134 6157 5910 468 231 26 0 chr5 23436775 23436892 -176193258 + L1MA8 LINE L1 6172 6291 0 * 25 90 0 0 chr5 23437395 23437462 -176192688 + AT_rich Low_complexity Low_complexity 1 67 0 282 95 0 0 chr5 23437869 23437911 -176192239 + (GA)n Simple_repeat Simple_repeat 1 42 0 29 47 0 0 chr5 23438044 23438087 -176192063 + AT_rich Low_complexity Low_complexity 1 43 0 24 0 0 0 chr5 23438694 23438718 -176191432 + AT_rich Low_complexity Low_complexity 1 24 0 2269 105 3 10 chr5 23438765 23439079 -176191071 - AluSx SINE Alu 0 312 1 26 50 0 0 chr5 23439299 23439339 -176190811 + AT_rich Low_complexity Low_complexity 1 40 0 269 271 75 37 chr5 23439744 23439851 -176190299 + L2 LINE L2 3187 3297 -16 204 290 0 0 chr5 23439881 23439943 -176190207 + (TATATG)n Simple_repeat Simple_repeat 5 66 0 696 182 8 0 chr5 23439959 23440091 -176190059 - FLAM_C SINE Alu 0 133 1 22 35 0 0 chr5 23440216 23440245 -176189905 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 23440404 23440433 -176189717 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 23440472 23440493 -176189657 + AT_rich Low_complexity Low_complexity 1 21 0 17105 60 2 2 chr5 23440857 23443881 -176186269 - L1PA5 LINE L1 0 6154 3131 3138 134 0 7 chr5 23444197 23444659 -176185491 - THE1-int LTR MaLR -729 851 393 580 129 10 0 chr5 23444659 23444760 -176185390 + L1PA13 LINE L1 6062 6163 0 22 35 0 0 chr5 23444760 23444789 -176185361 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr5 23445094 23445139 -176185011 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr5 23446162 23446198 -176183952 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 23446465 23446489 -176183661 + AT_rich Low_complexity Low_complexity 1 24 0 578 326 126 26 chr5 23447738 23448088 -176182062 + L2 LINE L2 1455 1839 -1475 270 352 30 30 chr5 23448121 23448357 -176181793 + L2 LINE L2 3074 3309 -4 879 319 81 23 chr5 23448981 23449413 -176180737 + LTR16B LTR ERVL 8 464 0 965 320 38 12 chr5 23449725 23450144 -176180006 + HERV16 LTR ERVL 839 1268 -3728 24 0 0 0 chr5 23451466 23451490 -176178660 + AT_rich Low_complexity Low_complexity 1 24 0 507 303 17 27 chr5 23451610 23451907 -176178243 - L1ME LINE L1 -552 5610 5317 7775 18 0 5 chr5 23451912 23453434 -176176716 - L1PA3 LINE L1 -4 6151 4634 305 253 160 38 chr5 23453586 23453823 -176176327 + L1M4 LINE L1 4807 5072 -1074 11368 207 34 31 chr5 23453913 23455222 -176174928 + L1PB4 LINE L1 2300 3604 -2542 1612 201 28 3 chr5 23455222 23455541 -176174609 + L1PB4 LINE L1 5825 6151 -5 11368 207 34 31 chr5 23455541 23455568 -176174582 + L1PB4 LINE L1 3604 3629 -2517 2163 128 10 0 chr5 23455568 23455874 -176174276 + AluSx SINE Alu 2 310 -2 11368 207 34 31 chr5 23455874 23456287 -176173863 + L1PB4 LINE L1 3629 4039 -2107 317 89 0 0 chr5 23456287 23456332 -176173818 + MADE1 DNA Mariner 1 45 -35 11368 207 34 31 chr5 23456332 23457465 -176172685 + L1PB4 LINE L1 4039 5237 -909 1588 216 39 23 chr5 23457999 23458383 -176171767 - MLT1B LTR MaLR 0 390 1 23 0 0 0 chr5 23460581 23460604 -176169546 + AT_rich Low_complexity Low_complexity 1 23 0 42381 37 23 2 chr5 23461551 23467343 -176162807 - L1PA3 LINE L1 -232 5923 3 700 203 49 0 chr5 23467569 23467712 -176162438 + MER67D LTR ERV1 1 150 -364 3366 96 14 2 chr5 23467712 23468201 -176161949 - L1PA14 LINE L1 -1 6160 5666 3761 128 2 16 chr5 23468202 23468854 -176161296 - L1PA14 LINE L1 -333 5828 5187 974 226 67 46 chr5 23468854 23469137 -176161013 + MER67C LTR ERV1 115 403 -307 310 261 142 8 chr5 23469149 23469283 -176160867 + MER67D LTR ERV1 359 510 -4 217 174 22 0 chr5 23470048 23470094 -176160056 + A-rich Low_complexity Low_complexity 4 50 0 229 258 97 32 chr5 23470715 23470808 -176159342 + MLT1L LTR MaLR 1 99 -516 32 67 0 0 chr5 23471329 23471389 -176158761 + AT_rich Low_complexity Low_complexity 1 60 0 1466 147 126 4 chr5 23471747 23472125 -176158025 - MER1A DNA MER1_type -14 519 57 30 0 0 0 chr5 23473854 23473884 -176156266 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr5 23475515 23475538 -176154612 + (TAAAAA)n Simple_repeat Simple_repeat 3 25 0 204 339 0 0 chr5 23475719 23475784 -176154366 + GA-rich Low_complexity Low_complexity 3 67 0 2401 50 9 31 chr5 23476974 23477292 -176152858 - AluY SINE Alu 0 311 1 213 214 0 0 chr5 23477572 23477614 -176152536 + T-rich Low_complexity Low_complexity 3 44 0 262 269 30 75 chr5 23477650 23477784 -176152366 - MIR SINE MIR -122 140 13 209 229 73 94 chr5 23477799 23477895 -176152255 + L2 LINE L2 3167 3260 -12 209 300 100 14 chr5 23478144 23478214 -176151936 + MIR SINE MIR 7 82 -180 229 180 0 20 chr5 23478261 23478311 -176151839 + MER58 DNA MER1_type 2364 2412 -8 2333 74 0 3 chr5 23478446 23478745 -176151405 - AluY SINE Alu -12 299 2 605 255 129 57 chr5 23479985 23480042 -176150108 - MLT1A2 LTR MaLR 0 374 323 2107 78 4 4 chr5 23480042 23480313 -176149837 + AluSc SINE Alu 26 296 -13 605 255 129 57 chr5 23480313 23480604 -176149546 - MLT1A2 LTR MaLR -51 323 1 24 91 0 0 chr5 23480617 23480683 -176149467 + AT_rich Low_complexity Low_complexity 1 66 0 1712 111 58 4 chr5 23481516 23481777 -176148373 - AluSx SINE Alu -16 296 22 212 189 0 19 chr5 23481892 23481945 -176148205 + T-rich Low_complexity Low_complexity 5 56 0 414 56 0 0 chr5 23484180 23484234 -176145916 + MADE1 DNA Mariner 26 79 -1 23 54 0 0 chr5 23484740 23484777 -176145373 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 23484887 23484908 -176145242 + AT_rich Low_complexity Low_complexity 1 21 0 758 252 104 43 chr5 23485076 23485469 -176144681 + ERVL-F LTR ERVL 5330 5746 -18 1164 247 35 38 chr5 23485477 23486019 -176144131 + MLT2F LTR ERVL 9 603 -60 1704 260 9 0 chr5 23487005 23487459 -176142691 + L1M4 LINE L1 4815 5272 -874 1530 39 0 0 chr5 23487459 23487639 -176142511 + AluY SINE Alu 1 180 -131 599 322 48 9 chr5 23488182 23488409 -176141741 + MIR SINE MIR 19 254 -8 252 152 65 0 chr5 23488448 23488494 -176141656 + MER53 DNA DNA 1 49 -140 377 246 98 0 chr5 23488509 23488631 -176141519 - L1MA9 LINE L1 -10 6302 6169 259 254 0 0 chr5 23488722 23488785 -176141365 - MER53 DNA DNA -101 88 26 2409 74 0 0 chr5 23488786 23489082 -176141068 - AluY SINE Alu -15 296 1 7201 157 19 9 chr5 23489331 23490618 -176139532 + HSMAR2 DNA Mariner 3 1301 -1 2094 149 22 8 chr5 23491103 23491458 -176138692 - THE1B LTR MaLR -2 362 3 27 49 0 0 chr5 23492024 23492065 -176138085 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr5 23492262 23492284 -176137866 + AT_rich Low_complexity Low_complexity 1 22 0 400 232 107 55 chr5 23492293 23492620 -176137530 - L1M4 LINE L1 -1469 4677 4334 637 203 25 0 chr5 23492913 23493031 -176137119 - MLT1A2 LTR MaLR -248 126 6 24 0 0 0 chr5 23493146 23493170 -176136980 + AT_rich Low_complexity Low_complexity 1 24 0 1826 213 14 16 chr5 23493842 23494209 -176135941 - MLT1A2 LTR MaLR -2 372 7 23 0 0 0 chr5 23494452 23494475 -176135675 + AT_rich Low_complexity Low_complexity 1 23 0 2204 105 105 28 chr5 23494475 23494824 -176135326 - L1MA3 LINE L1 0 6305 5921 2885 106 48 33 chr5 23494824 23495306 -176134844 + LTR22B LTR ERVK 1 489 -3 2204 105 105 28 chr5 23495306 23495348 -176134802 - L1MA3 LINE L1 -384 5921 5884 969 226 36 81 chr5 23495635 23496183 -176133967 + MLT2A2 LTR ERVL 1 514 -40 733 153 0 0 chr5 23496195 23496306 -176133844 + ERVL LTR ERVL 798 908 -4856 308 121 0 121 chr5 23496309 23496347 -176133803 + MLT2B1 LTR ERVL 448 472 -48 279 0 0 0 chr5 23496347 23496378 -176133772 + (TG)n Simple_repeat Simple_repeat 2 32 0 308 121 0 121 chr5 23496378 23496422 -176133728 + MLT2B1 LTR ERVL 472 520 0 5081 194 18 10 chr5 23496451 23497436 -176132714 + HERVL-B1 LTR ERVL 19 1011 -4643 1164 218 16 4 chr5 23497443 23497695 -176132455 + MSTB LTR MaLR 7 261 -165 259 351 54 0 chr5 23497987 23498098 -176132052 - MIR SINE MIR -67 141 25 26 0 0 0 chr5 23498884 23498910 -176131240 + AT_rich Low_complexity Low_complexity 1 26 0 355 109 47 16 chr5 23498947 23499011 -176131139 - HERVL LTR ERVL -5031 623 558 618 265 27 58 chr5 23499807 23500030 -176130120 + LTR16C LTR ERVL 182 397 -94 554 229 150 38 chr5 23500463 23500782 -176129368 + MLT1G1 LTR MaLR 1 360 -182 3307 123 14 41 chr5 23501053 23501267 -176128883 - L1PA14 LINE L1 -135 6026 5808 459 0 0 0 chr5 23501267 23501318 -176128832 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2198 89 0 0 chr5 23501321 23501601 -176128549 - AluSg SINE Alu -30 280 1 3307 123 14 41 chr5 23501601 23501943 -176128207 - L1PA14 LINE L1 -355 5806 5481 5664 66 5 1 chr5 23501943 23502688 -176127462 - L1PA7 LINE L1 -3 6151 5404 6467 85 35 38 chr5 23502688 23503721 -176126429 + L1PA7 LINE L1 4362 5391 -755 24 0 0 0 chr5 23504413 23504437 -176125713 + AT_rich Low_complexity Low_complexity 1 24 0 306 0 0 0 chr5 23505034 23505098 -176125052 + (CA)n Simple_repeat Simple_repeat 1 98 0 306 0 0 0 chr5 23505098 23505132 -176125018 + (CA)n Simple_repeat Simple_repeat 1 34 0 194 371 149 4 chr5 23505226 23505501 -176124649 + L2 LINE L2 2851 3165 -107 1962 99 62 0 chr5 23507283 23507556 -176122594 - AluSx SINE Alu -22 290 1 34 65 0 0 chr5 23507572 23507634 -176122516 + AT_rich Low_complexity Low_complexity 1 62 0 207 0 0 0 chr5 23507766 23507789 -176122361 + (TC)n Simple_repeat Simple_repeat 2 24 0 330 156 0 0 chr5 23508719 23508783 -176121367 + (CA)n Simple_repeat Simple_repeat 1 64 0 1105 263 53 33 chr5 23509554 23509949 -176120201 + LTR52 LTR ERVL 16 418 -3 2011 103 4 4 chr5 23510210 23510491 -176119659 - AluSc SINE Alu -28 281 1 1292 255 50 60 chr5 23510592 23511076 -176119074 + MLT2B1 LTR ERVL 1 481 -39 225 94 0 0 chr5 23511076 23511108 -176119042 + (CA)n Simple_repeat Simple_repeat 1 32 0 1292 255 50 60 chr5 23511108 23511144 -176119006 + MLT2B1 LTR ERVL 481 516 -4 22 35 0 0 chr5 23511982 23512011 -176118139 + AT_rich Low_complexity Low_complexity 1 29 0 1715 159 161 11 chr5 23512021 23512393 -176117757 - MSTA LTR MaLR 0 428 1 1136 230 125 26 chr5 23512411 23512715 -176117435 + MLT1A1 LTR MaLR 1 334 -31 240 180 49 49 chr5 23513716 23513777 -176116373 + MLT1I LTR MaLR 349 409 0 6253 147 34 33 chr5 23514176 23515214 -176114936 + Tigger3b DNA MER2_type 3 1044 -1984 2374 59 16 13 chr5 23515214 23515519 -176114631 - AluY SINE Alu -5 306 1 6253 147 34 33 chr5 23515519 23515708 -176114442 + Tigger3b DNA MER2_type 1044 1231 0 21 89 0 0 chr5 23516127 23516183 -176113967 + AT_rich Low_complexity Low_complexity 1 56 0 2285 80 14 39 chr5 23516192 23516556 -176113594 - L1PA8 LINE L1 0 6172 5818 659 237 29 23 chr5 23519287 23519460 -176110690 + MER58A DNA MER1_type 48 221 -3 23 97 0 0 chr5 23519650 23519722 -176110428 + AT_rich Low_complexity Low_complexity 1 72 0 337 242 181 40 chr5 23519780 23519929 -176110221 - MER5B DNA MER1_type -7 171 2 1168 121 6 6 chr5 23520425 23520598 -176109552 - AluSp SINE Alu -15 298 126 287 223 65 93 chr5 23520792 23520931 -176109219 - MER104 DNA Tc2 -44 136 2 24 96 0 0 chr5 23522919 23522992 -176107158 + AT_rich Low_complexity Low_complexity 1 73 0 261 0 0 0 chr5 23523753 23523782 -176106368 + (CA)n Simple_repeat Simple_repeat 2 30 0 1773 180 8 42 chr5 23524976 23525331 -176104819 + MER2 DNA MER2_type 1 343 -2 2319 98 0 0 chr5 23525472 23525767 -176104383 - AluSx SINE Alu -12 300 6 450 250 28 7 chr5 23526325 23526469 -176103681 - L1M4 LINE L1 -2196 3950 3804 311 164 107 66 chr5 23526708 23526830 -176103320 - HAL1b LINE L1 -142 1206 1080 33 43 0 0 chr5 23527145 23527192 -176102958 + AT_rich Low_complexity Low_complexity 1 47 0 2448 62 0 0 chr5 23527486 23527795 -176102355 - AluY SINE Alu -2 309 1 4957 211 46 36 chr5 23528315 23530484 -176099666 + L1MC1 LINE L1 4127 6316 -17 2067 124 0 34 chr5 23531950 23532273 -176097877 - AluSq SINE Alu -1 312 1 453 310 27 11 chr5 23532779 23532963 -176097187 - MER20 DNA MER1_type 0 219 33 30 45 0 0 chr5 23533844 23533888 -176096262 + AT_rich Low_complexity Low_complexity 1 44 0 27 0 0 0 chr5 23533977 23534004 -176096146 + AT_rich Low_complexity Low_complexity 1 27 0 842 236 0 116 chr5 23535536 23535820 -176094330 + MLT1A2 LTR MaLR 1 251 -123 534 228 121 31 chr5 23535858 23536148 -176094002 + L1M4 LINE L1 2039 2354 -4030 573 128 11 0 chr5 23536416 23536510 -176093640 + L1PA3 LINE L1 6058 6152 -3 580 232 58 7 chr5 23536755 23536893 -176093257 + L1MD2 LINE L1 26 170 -6370 288 284 8 15 chr5 23536894 23537028 -176093122 + L1M4 LINE L1 4104 4236 -2146 29 0 0 0 chr5 23537115 23537144 -176093006 + AT_rich Low_complexity Low_complexity 1 29 0 713 285 104 35 chr5 23537463 23537798 -176092352 - L1ME LINE L1 -4513 1567 1256 297 0 0 0 chr5 23537798 23537831 -176092319 + (TG)n Simple_repeat Simple_repeat 2 34 0 713 285 104 35 chr5 23537831 23538457 -176091693 - L1ME LINE L1 -4824 1256 528 2739 53 126 0 chr5 23539465 23539863 -176090287 - LTR7 LTR ERV1 -2 448 1 202 244 56 100 chr5 23539945 23540035 -176090115 - MIR3 SINE MIR -36 172 87 267 235 15 0 chr5 23541406 23541474 -176088676 + (TA)n Simple_repeat Simple_repeat 1 69 0 1693 205 67 29 chr5 23542060 23542552 -176087598 - MER9 LTR ERVK 0 511 1 2113 99 0 3 chr5 23542590 23542883 -176087267 + AluSg SINE Alu 1 292 -18 232 273 57 23 chr5 23544503 23544591 -176085559 - L2 LINE L2 -52 3261 3171 287 337 91 25 chr5 23544702 23544901 -176085249 - L2 LINE L2 -288 3025 2814 276 30 0 0 chr5 23545586 23545619 -176084531 + (CA)n Simple_repeat Simple_repeat 2 34 0 276 358 32 8 chr5 23546731 23546854 -176083296 - MIR SINE MIR -63 145 20 1135 283 10 0 chr5 23547453 23547746 -176082404 - MLT1E2 LTR MaLR 0 626 331 293 313 101 52 chr5 23548291 23548579 -176081571 - MLT1J LTR MaLR -78 433 132 307 420 8 0 chr5 23548808 23548927 -176081223 + L1MD2 LINE L1 553 672 -5871 3029 208 48 21 chr5 23548978 23549842 -176080308 + L1MD2 LINE L1 801 1683 -4857 2520 243 113 37 chr5 23549872 23551842 -176078308 + L1MD2 LINE L1 4423 6553 -200 251 28 28 0 chr5 23551842 23551878 -176078272 + (CA)n Simple_repeat Simple_repeat 1 37 0 2520 243 113 37 chr5 23551878 23551932 -176078218 + L1MD2 LINE L1 6553 6601 -152 870 172 20 0 chr5 23551936 23552087 -176078063 - MER44D DNA MER2_type 0 605 580 6407 112 80 8 chr5 23556659 23557859 -176072291 - LOR1-int LTR ERV1 -4314 3806 2520 304 420 8 0 chr5 23558887 23559006 -176071144 + L1MDb LINE L1 419 538 -5871 2519 214 74 7 chr5 23559057 23559750 -176070400 + L1MDb LINE L1 667 1405 -5004 1682 202 33 19 chr5 23559861 23560227 -176069923 - MER44D DNA MER2_type -321 384 14 494 214 17 8 chr5 23560242 23560359 -176069791 + L1MD1 LINE L1 6100 6217 -25 239 157 72 0 chr5 23560531 23560614 -176069536 + (TA)n Simple_repeat Simple_repeat 1 89 0 198 93 87 31 chr5 23560630 23560791 -176069359 + (TTATA)n Simple_repeat Simple_repeat 5 174 0 222 43 0 64 chr5 23560797 23560863 -176069287 + (TAAA)n Simple_repeat Simple_repeat 1 105 0 222 43 0 64 chr5 23560863 23560910 -176069240 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 852 251 73 42 chr5 23561846 23562228 -176067922 + LTR52 LTR ERVL 25 418 -3 1882 92 22 4 chr5 23562485 23562757 -176067393 - AluSc SINE Alu -32 277 1 1214 250 60 60 chr5 23562857 23563336 -176066814 + MLT2B1 LTR ERVL 1 482 -38 225 94 0 0 chr5 23563336 23563368 -176066782 + (CA)n Simple_repeat Simple_repeat 1 32 0 1214 250 60 60 chr5 23563368 23563404 -176066746 + MLT2B1 LTR ERVL 481 516 -4 22 35 0 0 chr5 23564236 23564265 -176065885 + AT_rich Low_complexity Low_complexity 1 29 0 1465 181 178 3 chr5 23564274 23564633 -176065517 - MSTA LTR MaLR 0 428 7 278 32 97 16 chr5 23566061 23566123 -176064027 + (TATAA)n Simple_repeat Simple_repeat 5 71 0 21 89 0 0 chr5 23566238 23566294 -176063856 + AT_rich Low_complexity Low_complexity 1 56 0 2592 94 8 0 chr5 23566650 23567002 -176063148 + THE1A LTR MaLR 1 355 0 11391 106 2 2 chr5 23567002 23568583 -176061567 + THE1A-int LTR MaLR 1 1580 0 2149 86 131 0 chr5 23568583 23568897 -176061253 + THE1A LTR MaLR 1 355 0 26 30 0 0 chr5 23569202 23569235 -176060915 + AT_rich Low_complexity Low_complexity 1 33 0 1143 226 23 39 chr5 23569857 23570166 -176059984 - MER31A LTR ERV1 -9 476 173 530 163 10 20 chr5 23570176 23570274 -176059876 + THE1C LTR MaLR 279 375 0 8168 154 16 41 chr5 23570276 23571774 -176058376 + THE1C-int LTR MaLR 3 1463 -117 28 61 0 0 chr5 23571870 23571919 -176058231 + AT_rich Low_complexity Low_complexity 1 49 0 26 0 0 0 chr5 23572188 23572214 -176057936 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr5 23572278 23572307 -176057843 + AT_rich Low_complexity Low_complexity 1 29 0 713 265 6 0 chr5 23572875 23573045 -176057105 + AluJb SINE Alu 134 304 -8 2513 63 0 0 chr5 23573098 23573400 -176056750 + AluY SINE Alu 1 302 -9 227 292 138 0 chr5 23573765 23573895 -176056255 + MIR SINE MIR 56 203 -59 211 209 0 0 chr5 23574045 23574088 -176056062 + (CA)n Simple_repeat Simple_repeat 2 44 0 2542 49 3 0 chr5 23574292 23574596 -176055554 - AluY SINE Alu -6 305 1 1478 254 17 42 chr5 23575909 23576381 -176053769 + MLT1C LTR MaLR 8 467 0 21 57 0 0 chr5 23576547 23576582 -176053568 + AT_rich Low_complexity Low_complexity 1 35 0 1216 214 157 10 chr5 23576582 23576876 -176053274 + MER1B DNA MER1_type 1 337 0 864 323 33 17 chr5 23577661 23578104 -176052046 + HERVL LTR ERVL 2951 3484 -2280 301 336 15 45 chr5 23578161 23578295 -176051855 + HERVL LTR ERVL 3486 3615 -2039 555 301 31 51 chr5 23578377 23578669 -176051481 + HERVL LTR ERVL 3764 4049 -1715 693 333 42 17 chr5 23578682 23579036 -176051114 + HERVL LTR ERVL 4192 4554 -1210 21980 60 5 0 chr5 23579069 23582747 -176047403 + L1PA5 LINE L1 2468 6154 0 28 48 0 0 chr5 23582959 23583001 -176047149 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 23584212 23584233 -176045917 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 23586111 23586141 -176044009 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr5 23586323 23586353 -176043797 + AT_rich Low_complexity Low_complexity 1 30 0 217 326 23 12 chr5 23586811 23586897 -176043253 - MIR SINE MIR -124 138 52 22 35 0 0 chr5 23588180 23588209 -176041941 + AT_rich Low_complexity Low_complexity 1 29 0 274 190 0 0 chr5 23588687 23588745 -176041405 + L1MEc LINE L1 1836 1893 -4714 259 214 0 0 chr5 23588839 23588895 -176041255 + L1MB1 LINE L1 5901 5956 -212 270 316 34 28 chr5 23588900 23589077 -176041073 - L1MEc LINE L1 -4225 2171 1994 624 131 36 20 chr5 23589270 23589529 -176040621 + (TA)n Simple_repeat Simple_repeat 1 263 0 225 175 0 32 chr5 23589531 23589594 -176040556 + L1MEc LINE L1 2004 2064 -4362 309 169 14 28 chr5 23589622 23589693 -176040457 + L1MEc LINE L1 1998 2067 -4359 308 245 32 53 chr5 23589648 23589742 -176040408 - L1MC4 LINE L1 -1339 6703 6612 * 348 206 0 82 chr5 23589741 23589838 -176040312 + L1MC4 LINE L1 6614 6702 -1340 322 274 0 60 chr5 23589771 23589888 -176040262 - L1MC4 LINE L1 -1338 6704 6595 * 297 105 76 9 chr5 23589897 23590002 -176040148 + (TA)n Simple_repeat Simple_repeat 1 112 0 510 119 60 12 chr5 23590041 23590209 -176039941 + (TA)n Simple_repeat Simple_repeat 1 176 0 238 253 24 0 chr5 23590239 23590322 -176039828 - L1MC4 LINE L1 -1343 6699 6615 * 240 202 107 12 chr5 23590251 23590335 -176039815 + L1MC4 LINE L1 6614 6705 -1337 203 211 0 14 chr5 23590335 23590406 -176039744 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 1224 144 0 0 chr5 23590406 23590579 -176039571 - AluSq SINE Alu -140 173 1 418 316 66 60 chr5 23590626 23591335 -176038815 - L1M4c LINE L1 -4634 1750 1035 7950 94 11 22 chr5 23591335 23593363 -176036787 - L1PA7 LINE L1 -1 6153 4159 31 44 0 0 chr5 23593401 23593446 -176036704 + AT_rich Low_complexity Low_complexity 1 45 0 236 62 92 46 chr5 23593640 23593705 -176036445 + (TATAA)n Simple_repeat Simple_repeat 5 72 0 905 231 34 4 chr5 23593705 23593943 -176036207 - L1MC3 LINE L1 -61 7724 7480 2824 164 37 6 chr5 23594039 23594521 -176035629 - LOR1a LTR ERV1 0 497 1 572 152 0 11 chr5 23594521 23594613 -176035537 - LOR1a-int LTR ERV1 0 8120 8030 * 5917 136 7 8 chr5 23594612 23595556 -176034594 - LOR1-int LTR ERV1 -2056 6064 5122 14739 127 50 10 chr5 23595572 23598598 -176031552 - LOR1-int LTR ERV1 -3898 4222 1003 2124 109 22 0 chr5 23598598 23598909 -176031241 - L1PA6 LINE L1 -6 6148 5831 14739 127 50 10 chr5 23598909 23599306 -176030844 - LOR1-int LTR ERV1 -7117 1003 623 234 67 0 0 chr5 23599306 23599336 -176030814 - 5S rRNA rRNA -40 81 52 267 378 21 59 chr5 23599495 23599733 -176030417 + MER115 DNA AcHobo 329 557 -136 2304 100 0 3 chr5 23599755 23600054 -176030096 + AluSg SINE Alu 13 310 0 254 269 106 0 chr5 23600091 23600195 -176029955 + Zaphod DNA AcHobo 3917 4031 0 251 266 25 0 chr5 23601020 23601099 -176029051 + (TA)n Simple_repeat Simple_repeat 2 82 0 1948 118 3 24 chr5 23601143 23601473 -176028677 + AluSx SINE Alu 1 324 0 22 80 0 0 chr5 23602386 23602436 -176027714 + AT_rich Low_complexity Low_complexity 1 50 0 233 329 14 70 chr5 23602792 23602935 -176027215 - MIR3 SINE MIR -5 203 69 209 33 33 0 chr5 23604113 23604143 -176026007 + (TTTTTG)n Simple_repeat Simple_repeat 1 31 0 776 301 82 43 chr5 23604375 23604813 -176025337 - MLT1H1 LTR MaLR -1 554 100 194 0 39 0 chr5 23605363 23605389 -176024761 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 921 107 7 7 chr5 23605644 23605784 -176024366 + AluSp/q SINE Alu 168 307 -6 2161 113 0 3 chr5 23605788 23606089 -176024061 + AluSg SINE Alu 3 302 -8 272 217 0 72 chr5 23606092 23606175 -176023975 - L1M4 LINE L1 -1247 4899 4823 5144 262 58 54 chr5 23606185 23606917 -176023233 - L1M4 LINE L1 -1528 4618 3890 249 111 0 0 chr5 23606917 23606953 -176023197 - tRNA-Arg-AGA tRNA tRNA -40 36 1 5144 262 58 54 chr5 23606953 23608549 -176021601 - L1M4 LINE L1 -2256 3890 2246 297 0 0 0 chr5 23608550 23608583 -176021567 + (TG)n Simple_repeat Simple_repeat 1 33 0 628 192 8 0 chr5 23608599 23608724 -176021426 - L1MCa LINE L1 -5414 1012 887 183 80 0 0 chr5 23608940 23608965 -176021185 + (TG)n Simple_repeat Simple_repeat 1 25 0 4855 189 32 24 chr5 23609123 23609646 -176020504 - L1MC1 LINE L1 -7 6326 5809 891 222 102 68 chr5 23609646 23610029 -176020121 + MSTD LTR MaLR 1 396 0 4855 189 32 24 chr5 23610029 23610564 -176019586 - L1MC1 LINE L1 -524 5809 5259 1976 140 50 20 chr5 23610677 23611019 -176019131 - THE1B LTR MaLR -12 352 1 2824 204 22 22 chr5 23611044 23611636 -176018514 - L1MCa LINE L1 -5815 611 20 683 24 0 0 chr5 23613165 23613249 -176016901 + L1PA3 LINE L1 6067 6150 -5 272 48 24 0 chr5 23613260 23613302 -176016848 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 28 0 0 0 chr5 23614423 23614451 -176015699 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr5 23615724 23615751 -176014399 + AT_rich Low_complexity Low_complexity 1 27 0 11217 101 10 1 chr5 23615752 23618169 -176011981 - L1PA7 LINE L1 -1 6153 3752 21 0 0 0 chr5 23618388 23618409 -176011741 + AT_rich Low_complexity Low_complexity 1 21 0 34 0 0 0 chr5 23618630 23618664 -176011486 + AT_rich Low_complexity Low_complexity 1 34 0 1999 127 10 16 chr5 23618691 23619005 -176011145 + AluSx SINE Alu 1 312 0 27 73 0 0 chr5 23619108 23619163 -176010987 + AT_rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr5 23619473 23619495 -176010655 + AT_rich Low_complexity Low_complexity 1 22 0 435 252 43 0 chr5 23619618 23619733 -176010417 + MER110A LTR ERV1 1 120 -348 215 69 17 52 chr5 23619770 23619828 -176010322 + (TTATA)n Simple_repeat Simple_repeat 4 59 0 193 45 23 68 chr5 23619833 23619877 -176010273 + (TAAAAA)n Simple_repeat Simple_repeat 6 47 0 24 53 0 0 chr5 23619883 23619921 -176010229 + AT_rich Low_complexity Low_complexity 1 38 0 1568 241 70 42 chr5 23620031 23620532 -176009618 - MLT1E2 LTR MaLR -65 561 47 1741 137 17 37 chr5 23620550 23620978 -176009172 - Charlie3 DNA MER1_type 0 2711 6 21 36 0 0 chr5 23622863 23622891 -176007259 + AT_rich Low_complexity Low_complexity 1 28 0 186 354 89 0 chr5 23622891 23622970 -176007180 - L2 LINE L2 -48 3265 3180 296 333 21 28 chr5 23623246 23623387 -176006763 - L2 LINE L2 -468 2846 2707 439 252 37 133 chr5 23623445 23623663 -176006487 + MIR SINE MIR 29 225 -37 765 199 182 72 chr5 23623663 23624262 -176005888 + MER4C LTR ERV1 1 457 -8 2033 123 3 0 chr5 23624458 23624780 -176005370 + AluSp SINE Alu 1 323 0 24 32 0 0 chr5 23625394 23625425 -176004725 + AT_rich Low_complexity Low_complexity 1 31 0 270 0 0 0 chr5 23625748 23625778 -176004372 + (GA)n Simple_repeat Simple_repeat 2 31 0 23 0 0 0 chr5 23627145 23627168 -176002982 + AT_rich Low_complexity Low_complexity 1 23 0 574 311 151 33 chr5 23627724 23628041 -176002109 - MLT1G LTR MaLR 0 590 312 219 36 0 0 chr5 23628041 23628069 -176002081 + (GA)n Simple_repeat Simple_repeat 1 28 0 574 311 151 33 chr5 23628069 23628305 -176001845 - MLT1G LTR MaLR -278 312 1 338 273 55 42 chr5 23628860 23629025 -176001125 - MLT1D LTR MaLR -321 184 18 28 0 0 0 chr5 23629535 23629563 -176000587 + AT_rich Low_complexity Low_complexity 1 28 0 190 308 0 0 chr5 23630182 23630234 -175999916 - MIR SINE MIR -121 141 90 3266 188 35 23 chr5 23631290 23632042 -175998108 + L1MA10 LINE L1 5565 6325 -9 339 352 34 22 chr5 23632129 23632308 -175997842 - L2 LINE L2 -499 2815 2635 222 171 0 0 chr5 23632396 23632437 -175997713 + GA-rich Low_complexity Low_complexity 4 44 0 468 226 54 73 chr5 23632974 23633178 -175996972 - L1ME2 LINE L1 -10 6154 5955 2521 281 77 42 chr5 23633185 23633290 -175996860 - L1ME2 LINE L1 -913 5233 5133 1327 184 35 42 chr5 23633290 23633578 -175996572 - AluJb SINE Alu -22 290 5 2521 281 77 42 chr5 23633578 23634302 -175995848 - L1ME2 LINE L1 -1013 5133 4435 1931 167 11 35 chr5 23634302 23634673 -175995477 + THE1B LTR MaLR 3 364 0 10320 121 17 3 chr5 23634673 23636231 -175993919 + THE1B-int LTR MaLR 1 1580 0 1900 165 19 32 chr5 23636231 23636600 -175993550 + THE1B LTR MaLR 1 364 0 2521 281 77 42 chr5 23636600 23637466 -175992684 - L1ME2 LINE L1 -1710 4436 3477 373 256 144 26 chr5 23637556 23637751 -175992399 - L1MDb LINE L1 -2456 4188 3971 1387 250 66 50 chr5 23637912 23638209 -175991941 - L1M4 LINE L1 -3242 3402 3111 389 36 18 0 chr5 23638209 23638264 -175991886 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 1387 250 66 50 chr5 23638264 23638661 -175991489 - L1M4 LINE L1 -3533 3111 2697 511 77 26 0 chr5 23640130 23640208 -175989942 + MADE1 DNA Mariner 1 80 0 2352 74 7 3 chr5 23640320 23640629 -175989521 + AluY SINE Alu 1 310 -1 238 183 32 32 chr5 23640761 23640854 -175989296 + (TA)n Simple_repeat Simple_repeat 2 94 0 26 50 0 0 chr5 23640916 23640956 -175989194 + AT_rich Low_complexity Low_complexity 1 40 0 808 213 0 0 chr5 23640956 23641106 -175989044 - FRAM SINE Alu -16 150 1 905 112 0 0 chr5 23641445 23641570 -175988580 - THE1B LTR MaLR -4 360 236 207 111 0 28 chr5 23641699 23641735 -175988415 + (TC)n Simple_repeat Simple_repeat 2 36 0 180 0 0 0 chr5 23642471 23642491 -175987659 + (TTA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr5 23642933 23642954 -175987196 + AT_rich Low_complexity Low_complexity 1 21 0 1598 231 69 9 chr5 23643083 23643503 -175986647 + MLT1C LTR MaLR 17 461 -6 21 0 0 0 chr5 23645662 23645683 -175984467 + AT_rich Low_complexity Low_complexity 1 21 0 469 288 88 65 chr5 23645702 23646240 -175983910 - L1M4 LINE L1 -5720 926 142 307 100 0 67 chr5 23646240 23646300 -175983850 - L1PA3 LINE L1 -1 6154 6099 469 288 88 65 chr5 23646300 23646439 -175983711 - L1M4 LINE L1 -6504 142 8 287 289 26 0 chr5 23646450 23646526 -175983624 - L1MDb LINE L1 -3393 3251 3174 215 211 18 18 chr5 23646548 23646605 -175983545 + (TA)n Simple_repeat Simple_repeat 2 58 0 1676 275 90 26 chr5 23646675 23647877 -175982273 - L1MDb LINE L1 -3515 3129 1839 854 230 108 26 chr5 23647891 23648371 -175981779 - L1MDb LINE L1 -4859 1785 1255 261 316 40 67 chr5 23648885 23649110 -175981040 - L1MDb LINE L1 -6307 337 119 22 0 0 0 chr5 23649110 23649132 -175981018 + AT_rich Low_complexity Low_complexity 1 22 0 235 286 19 9 chr5 23649182 23649287 -175980863 - L1MEc LINE L1 -5273 1123 1018 4186 167 15 1 chr5 23649289 23650027 -175980123 - L1PA16 LINE L1 -4 6162 5415 24 32 0 0 chr5 23650033 23650064 -175980086 + AT_rich Low_complexity Low_complexity 1 31 0 6677 257 64 32 chr5 23650080 23653885 -175976265 - L1MB3 LINE L1 -2 6417 2464 331 113 0 16 chr5 23653885 23653947 -175976203 - L1PA11 LINE L1 -1 6173 6113 6677 257 64 32 chr5 23653947 23654306 -175975844 - L1MB3 LINE L1 -3955 2464 2118 416 121 30 0 chr5 23654311 23654377 -175975773 - MADE1 DNA Mariner 0 80 13 870 231 11 16 chr5 23654386 23654572 -175975578 - L1MB3 LINE L1 -5758 626 442 370 289 36 6 chr5 23654609 23654775 -175975375 - L1MEc LINE L1 -6218 178 8 182 88 0 29 chr5 23654864 23654898 -175975252 + (TA)n Simple_repeat Simple_repeat 1 33 0 502 333 128 10 chr5 23655037 23655334 -175974816 + LTR16B LTR ERVL 8 339 -125 1478 241 88 8 chr5 23655995 23656463 -175973687 - MLT1D LTR MaLR 0 505 1 1728 224 15 27 chr5 23657652 23658058 -175972092 - MSTB2 LTR MaLR -53 404 4 30 27 0 0 chr5 23658090 23658127 -175972023 + AT_rich Low_complexity Low_complexity 1 37 0 182 305 17 17 chr5 23658277 23658336 -175971814 + MER5A DNA MER1_type 130 188 -1 22 35 0 0 chr5 23659352 23659381 -175970769 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 23659662 23659684 -175970466 + AT_rich Low_complexity Low_complexity 1 22 0 217 260 60 40 chr5 23659757 23659857 -175970293 - MIR SINE MIR -87 175 74 2014 132 0 4 chr5 23660035 23660315 -175969835 - AluSx SINE Alu -33 279 1 326 198 31 52 chr5 23662201 23662297 -175967853 + MER105 DNA DNA 106 199 -5 2380 80 0 0 chr5 23662862 23663163 -175966987 + AluSq SINE Alu 2 302 -11 26 74 0 0 chr5 23663279 23663333 -175966817 + AT_rich Low_complexity Low_complexity 1 54 0 1464 185 10 27 chr5 23663613 23663911 -175966239 - AluJb SINE Alu -19 293 1 21 0 0 0 chr5 23663948 23663969 -175966181 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 23665353 23665391 -175964759 + AT_rich Low_complexity Low_complexity 1 38 0 396 280 70 13 chr5 23665803 23665960 -175964190 - MIR SINE MIR -2 260 95 1331 201 177 14 chr5 23665960 23666328 -175963822 - MSTA LTR MaLR 0 428 1 8954 156 9 37 chr5 23666328 23667952 -175962198 - MSTA-int LTR MaLR 0 1580 3 1609 178 169 16 chr5 23667954 23668323 -175961827 - MSTA LTR MaLR 0 428 4 185 409 131 10 chr5 23668780 23669093 -175961057 + L2 LINE L2 2584 2934 -380 2034 112 0 0 chr5 23669111 23669389 -175960761 - AluSq SINE Alu 0 313 36 203 162 0 0 chr5 23669983 23670020 -175960130 + A-rich Low_complexity Low_complexity 4 40 0 1936 160 0 0 chr5 23670066 23670354 -175959796 + AluSx SINE Alu 3 290 -22 4920 99 27 4 chr5 23670578 23671323 -175958827 + MER4E LTR ERV1 1 762 -4 1926 132 7 7 chr5 23671327 23671623 -175958527 + MER4E-int LTR ERV1 1 296 -6462 1498 122 262 9 chr5 23671623 23671959 -175958191 + MER4E-int LTR ERV1 752 1172 -5586 2814 150 107 29 chr5 23671970 23672631 -175957519 + MER4E-int LTR ERV1 940 1652 -3363 376 221 7 36 chr5 23672660 23672809 -175957341 - pTR5 LTR ERV1 -95 685 37 1358 118 68 18 chr5 23673236 23673328 -175956822 + MER4E-int LTR ERV1 1671 1757 -5001 1747 65 12 29 chr5 23673328 23673574 -175956576 - AluY SINE Alu -7 304 63 1358 118 68 18 chr5 23673574 23673761 -175956389 + MER4E-int LTR ERV1 1757 1964 -4794 3826 137 37 3 chr5 23673772 23674371 -175955779 + LTR9B LTR ERV1 26 644 0 5252 141 54 31 chr5 23674374 23675484 -175954666 + MER4E-int LTR ERV1 1961 3095 -3663 3507 134 36 67 chr5 23675484 23676155 -175953995 + MER4E-int LTR ERV1 3439 4088 -2670 * 7557 131 44 19 chr5 23676154 23678141 -175952009 + MER4E-int LTR ERV1 4452 6645 -113 5181 89 27 7 chr5 23678990 23679741 -175950409 + MER4E LTR ERV1 1 766 0 506 311 120 78 chr5 23680103 23680285 -175949865 + L2 LINE L2 1128 1301 -2012 1020 79 0 48 chr5 23680285 23680474 -175949676 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 506 311 120 78 chr5 23680474 23680490 -175949660 + L2 LINE L2 1301 1315 -1998 695 209 0 0 chr5 23680490 23680619 -175949531 - FLAM_A SINE Alu -4 129 1 506 311 120 78 chr5 23680619 23681374 -175948776 + L2 LINE L2 1315 3240 -73 26 0 0 0 chr5 23681391 23681417 -175948733 + AT_rich Low_complexity Low_complexity 1 26 0 2120 94 14 0 chr5 23681505 23681792 -175948358 + AluSc SINE Alu 1 291 -18 2193 120 0 22 chr5 23681911 23682228 -175947922 + AluSg SINE Alu 1 310 0 228 286 13 0 chr5 23682281 23682358 -175947792 + L1ME LINE L1 5511 5588 -578 25 31 0 0 chr5 23682431 23682463 -175947687 + AT_rich Low_complexity Low_complexity 1 32 0 783 196 0 8 chr5 23682534 23682667 -175947483 + FAM SINE Alu 20 151 -34 21 36 0 0 chr5 23682676 23682704 -175947446 + AT_rich Low_complexity Low_complexity 1 28 0 260 284 0 0 chr5 23682710 23682777 -175947373 + GA-rich Low_complexity Low_complexity 2 68 0 1700 201 12 58 chr5 23683424 23683552 -175946598 - MLT2D LTR ERVL -2 412 280 1993 125 0 10 chr5 23683552 23683849 -175946301 + AluSg SINE Alu 9 302 -8 1700 201 12 58 chr5 23683849 23684152 -175945998 - MLT2D LTR ERVL -134 280 1 270 339 48 0 chr5 23684774 23684898 -175945252 - MIR3 SINE MIR -39 169 40 809 228 115 59 chr5 23684943 23685316 -175944834 - MSTD LTR MaLR -2 394 1 5937 182 14 18 chr5 23685851 23688155 -175941995 - L1PB2 LINE L1 0 6867 4574 6176 239 10 14 chr5 23688156 23689945 -175940205 - L1PB2 LINE L1 -2448 4414 2633 1149 283 36 3 chr5 23689935 23690296 -175939854 - L1PB2 LINE L1 -6485 378 6 * 1584 280 69 48 chr5 23690466 23691335 -175938815 - L1ME3A LINE L1 -1 6169 5283 339 335 69 28 chr5 23691383 23691601 -175938549 - L1ME3A LINE L1 -936 5210 4984 994 284 68 65 chr5 23691602 23692754 -175937396 + L1M4 LINE L1 2461 3615 -2531 356 291 57 32 chr5 23693197 23693355 -175936795 + MIR SINE MIR 101 262 0 871 234 109 7 chr5 23694985 23695288 -175934862 + MER33 DNA MER1_type 1 323 -1 440 213 44 52 chr5 23695713 23695849 -175934301 - L1MB5 LINE L1 -3 6171 6037 682 189 8 0 chr5 23695896 23696028 -175934122 + FLAM_C SINE Alu 1 133 0 1434 191 34 24 chr5 23696703 23696997 -175933153 - AluJo SINE Alu -15 297 1 927 142 186 0 chr5 23697304 23697487 -175932663 - Tigger1 DNA MER2_type 0 2418 2202 775 210 6 6 chr5 23697476 23697633 -175932517 - Tigger1 DNA MER2_type -2261 157 1 * 1762 140 29 42 chr5 23700041 23700419 -175929731 - THE1C LTR MaLR 0 375 3 232 26 0 51 chr5 23700495 23700534 -175929616 + (TA)n Simple_repeat Simple_repeat 1 37 0 1654 132 60 87 chr5 23700709 23701089 -175929061 - THE1C LTR MaLR -5 370 1 2117 110 20 0 chr5 23701385 23701677 -175928473 - AluSp SINE Alu -15 298 1 2268 117 0 0 chr5 23702448 23702756 -175927394 - AluSg SINE Alu 0 310 3 512 340 84 61 chr5 23702756 23703342 -175926808 - ERVL LTR ERVL -3792 1972 1374 490 321 28 9 chr5 23703562 23703777 -175926373 - ERVL LTR ERVL -5075 689 471 353 272 149 34 chr5 23704851 23705086 -175925064 - LTR41 LTR ERVL -510 263 2 415 318 91 56 chr5 23706226 23706906 -175923244 + L1M4 LINE L1 40 754 -5788 213 39 0 0 chr5 23706906 23706932 -175923218 + (TAA)n Simple_repeat Simple_repeat 3 28 0 415 318 91 56 chr5 23706932 23707066 -175923084 + L1M4 LINE L1 754 882 -5660 1263 277 80 48 chr5 23707165 23707889 -175922261 + L1M4 LINE L1 882 1657 -4989 2582 124 0 11 chr5 23707889 23708268 -175921882 - THE1C LTR MaLR 0 375 1 1263 277 80 48 chr5 23708268 23708711 -175921439 + L1M4 LINE L1 1657 2084 -4562 715 223 46 7 chr5 23708909 23709128 -175921022 - MER61D LTR ERV1 0 732 274 1278 123 5 30 chr5 23709130 23709333 -175920817 - THE1C LTR MaLR -177 198 1 1044 65 18 24 chr5 23709337 23709506 -175920644 - THE1C-int LTR MaLR -6 1574 1407 * 2462 146 11 3 chr5 23709488 23709858 -175920292 - THE1C-int LTR MaLR -306 1274 902 1011 221 108 0 chr5 23710816 23711047 -175919103 - MER61D-int LTR ERV1 -299 6792 6537 4224 254 26 5 chr5 23711427 23712324 -175917826 - MER61D-int LTR ERV1 -3671 3420 2505 1335 181 13 0 chr5 23712360 23712597 -175917553 - MER61D-int LTR ERV1 -4684 2407 2168 3366 264 42 53 chr5 23712630 23714247 -175915903 - MER61D-int LTR ERV1 -6015 981 39 707 199 52 36 chr5 23714264 23714476 -175915674 - MER61D LTR ERV1 -4 790 340 1011 268 29 29 chr5 23714912 23715470 -175914680 + L1M4 LINE L1 2469 2976 -3668 443 320 44 34 chr5 23716095 23716301 -175913849 + MIR SINE MIR 11 218 -44 2065 66 0 26 chr5 23717117 23717389 -175912761 - AluY SINE Alu -16 295 31 4272 115 108 42 chr5 23717389 23718160 -175911990 - LTR12 LTR ERV1 0 826 5 2084 199 33 28 chr5 23718176 23718749 -175911401 - pTR5 LTR ERV1 -1094 1344 769 259 132 89 0 chr5 23718759 23718815 -175911335 - AluY SINE Alu -254 46 1 905 130 13 0 chr5 23718818 23718972 -175911178 - L1M4c LINE L1 -4551 1833 1678 * 3477 181 16 34 chr5 23718966 23719663 -175910487 - L1M4c LINE L1 -5695 689 6 888 311 104 56 chr5 23720791 23721662 -175908488 + HAL1 LINE L1 881 1793 -714 676 47 0 85 chr5 23722095 23722224 -175907926 + AluY SINE Alu 187 306 0 242 290 0 19 chr5 23722445 23722552 -175907598 + HAL1 LINE L1 2292 2396 -111 1971 115 0 0 chr5 23723580 23723841 -175906309 + AluSx SINE Alu 2 262 -50 270 0 0 0 chr5 23723841 23723871 -175906279 + (CA)n Simple_repeat Simple_repeat 2 31 0 307 337 79 14 chr5 23724276 23724555 -175905595 + L1M4 LINE L1 2148 2444 -3702 23 54 0 0 chr5 23724852 23724889 -175905261 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr5 23725118 23725147 -175905003 + AT_rich Low_complexity Low_complexity 1 29 0 4602 162 60 10 chr5 23726201 23727346 -175902804 - L1PA15 LINE L1 0 6165 4975 3818 209 7 62 chr5 23727373 23728405 -175901745 + L1P LINE L1 2857 3831 -2315 2459 163 20 60 chr5 23728610 23728978 -175901172 - Tigger5 DNA MER2_type -5 2318 1937 2177 155 28 0 chr5 23728978 23729332 -175900818 + THE1B LTR MaLR 1 364 0 2459 163 20 60 chr5 23729332 23729395 -175900755 - Tigger5 DNA MER2_type -386 1937 1907 2214 107 3 10 chr5 23729395 23729695 -175900455 + AluSx SINE Alu 1 298 -14 2459 163 20 60 chr5 23729695 23729766 -175900384 - Tigger5 DNA MER2_type -416 1907 1835 1029 266 9 4 chr5 23729750 23729983 -175900167 - Tigger5 DNA MER2_type -2089 234 1 * 26983 139 22 74 chr5 23730332 23732759 -175897391 + L1PA8 LINE L1 10 2563 -3583 1862 140 20 3 chr5 23732759 23733051 -175897099 + AluSg SINE Alu 1 297 -13 26983 139 22 74 chr5 23733051 23734494 -175895656 + L1PA8 LINE L1 2563 3499 -2647 2137 20 8 0 chr5 23734494 23734745 -175895405 - L1PA4 LINE L1 -2 6153 5901 26983 139 22 74 chr5 23734745 23736468 -175893682 + L1PA8 LINE L1 3499 5311 -835 5513 82 48 0 chr5 23736581 23737379 -175892771 + L1PA8 LINE L1 5334 6168 0 26 0 0 0 chr5 23737424 23737450 -175892700 + AT_rich Low_complexity Low_complexity 1 26 0 1358 205 7 34 chr5 23737900 23738198 -175891952 - AluJo SINE Alu -22 290 1 3732 163 12 40 chr5 23738451 23739250 -175890900 - L1PA15 LINE L1 -7 6158 5382 2649 197 9 4 chr5 23739355 23739888 -175890262 - L1PA15 LINE L1 -1141 5005 4470 777 310 61 3 chr5 23739889 23740215 -175889935 + L2 LINE L2 1840 2184 -1130 285 232 61 0 chr5 23740505 23740587 -175889563 + L1MCa LINE L1 1522 1608 -4818 1356 196 7 22 chr5 23740617 23740888 -175889262 + AluJb SINE Alu 1 267 -45 24 0 0 0 chr5 23741195 23741219 -175888931 + AT_rich Low_complexity Low_complexity 1 24 0 25 99 0 0 chr5 23742033 23742114 -175888036 + AT_rich Low_complexity Low_complexity 1 81 0 3079 17 0 0 chr5 23743021 23743377 -175886773 - L1PA2 LINE L1 -2 6153 5798 234 192 0 0 chr5 23743585 23743637 -175886513 + CT-rich Low_complexity Low_complexity 2 53 0 21 57 0 0 chr5 23744279 23744314 -175885836 + AT_rich Low_complexity Low_complexity 1 35 0 940 106 81 6 chr5 23744500 23744661 -175885489 - L1MA2 LINE L1 -10 6294 6122 647 140 9 19 chr5 23744661 23744768 -175885382 - U6 snRNA snRNA 0 107 2 1235 243 17 14 chr5 23744769 23745119 -175885031 - L1M4 LINE L1 -442 5736 5386 1837 137 48 3 chr5 23745442 23745734 -175884416 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr5 23745921 23745942 -175884208 + AT_rich Low_complexity Low_complexity 1 21 0 2357 118 3 0 chr5 23746443 23746792 -175883358 + L1PA14 LINE L1 5812 6161 0 553 242 148 35 chr5 23746843 23747330 -175882820 - MER69 DNA AcHobo -35 2491 1950 275 284 62 0 chr5 23747336 23747417 -175882733 - MER69 DNA AcHobo -2433 93 8 2145 73 0 4 chr5 23747848 23748121 -175882029 + AluY SINE Alu 1 272 -39 225 315 0 0 chr5 23748373 23748503 -175881647 + (CATATA)n Simple_repeat Simple_repeat 5 134 0 376 207 72 10 chr5 23748503 23748643 -175881507 - L1MB8 LINE L1 -2 6176 6018 580 373 24 4 chr5 23749120 23749375 -175880775 - L2 LINE L2 -2486 828 569 849 321 118 51 chr5 23750283 23751053 -175879097 + L2 LINE L2 2091 2912 -402 183 290 58 14 chr5 23751270 23751339 -175878811 + L2 LINE L2 3152 3223 -90 280 312 189 33 chr5 23751462 23751795 -175878355 - L2 LINE L2 -8 3305 2921 449 333 27 5 chr5 23752225 23752411 -175877739 - MLT1J LTR MaLR -316 195 6 483 293 108 5 chr5 23752421 23752633 -175877517 - L1ME1 LINE L1 -92 6869 6636 1049 99 0 41 chr5 23752652 23752823 -175877327 - AluY SINE Alu -9 302 139 1043 266 56 0 chr5 23752826 23753130 -175877020 - L1ME1 LINE L1 -341 6620 6300 * 34539 85 62 2 chr5 23753129 23758908 -175871242 - L1PA6 LINE L1 -6 6148 11 860 212 21 13 chr5 23758923 23759289 -175870861 - L1ME1 LINE L1 -668 6293 5930 24 32 0 0 chr5 23759447 23759478 -175870672 + AT_rich Low_complexity Low_complexity 1 31 0 1352 177 53 42 chr5 23759499 23759782 -175870368 + AluSx SINE Alu 1 286 -26 1152 134 27 0 chr5 23759797 23759984 -175870166 - Tigger5 DNA MER2_type -70 2253 2062 230 195 0 0 chr5 23759983 23760024 -175870126 - Tigger5 DNA MER2_type -2262 61 21 * 4343 152 25 11 chr5 23760043 23760827 -175869323 - L1MA8 LINE L1 -68 6223 5429 1328 230 25 22 chr5 23760818 23761175 -175868975 - L1ME1 LINE L1 -1024 5917 5560 * 270 325 16 0 chr5 23761581 23761704 -175868446 + LTR33 LTR ERVL 327 451 -70 23 0 0 0 chr5 23762556 23762579 -175867571 + AT_rich Low_complexity Low_complexity 1 23 0 360 296 89 19 chr5 23762793 23763050 -175867100 - L1ME1 LINE L1 -2863 4078 3804 269 330 110 0 chr5 23763050 23763168 -175866982 + MLT1J1 LTR MaLR 1 131 -315 23 33 0 0 chr5 23764398 23764428 -175865722 + AT_rich Low_complexity Low_complexity 1 30 0 2038 251 42 20 chr5 23765668 23766258 -175863892 - LTR26 LTR ERV1 0 603 1 219 69 0 0 chr5 23766570 23766599 -175863551 + (TA)n Simple_repeat Simple_repeat 1 29 0 219 36 0 0 chr5 23766598 23766626 -175863524 + (CA)n Simple_repeat Simple_repeat 2 29 0 26 50 0 0 chr5 23766838 23766878 -175863272 + AT_rich Low_complexity Low_complexity 1 40 0 332 271 50 55 chr5 23766987 23767186 -175862964 + L1M4 LINE L1 3671 3868 -2278 22 35 0 0 chr5 23767195 23767224 -175862926 + AT_rich Low_complexity Low_complexity 1 29 0 1222 106 0 0 chr5 23767300 23767470 -175862680 + AluY SINE Alu 135 304 -7 251 258 46 62 chr5 23768100 23768260 -175861890 - L1ME1 LINE L1 -4631 2468 2159 282 222 265 8 chr5 23768834 23768951 -175861199 - LTR50 LTR ERVL -628 167 21 245 250 73 10 chr5 23768999 23769095 -175861055 - L1ME1 LINE L1 -4785 2158 2057 383 326 57 65 chr5 23769102 23769189 -175860961 - L1ME1 LINE L1 -4926 2196 2110 1930 121 10 10 chr5 23769189 23769494 -175860656 - AluY SINE Alu -6 305 1 383 326 57 65 chr5 23769494 23769777 -175860373 - L1ME1 LINE L1 -5012 2110 1829 229 285 72 25 chr5 23769872 23770149 -175860001 - L1ME1 LINE L1 -4901 1522 1230 920 181 31 84 chr5 23770997 23771223 -175858927 - MER67D LTR ERV1 -300 214 1 610 274 74 23 chr5 23771318 23771533 -175858617 - MER67D-int LTR ERV1 -111 4825 4600 1265 261 32 37 chr5 23771552 23771958 -175858192 - MER31-int LTR ERV1 -4135 801 398 2011 89 0 73 chr5 23772239 23772555 -175857595 + AluSx SINE Alu 17 309 -3 255 297 25 59 chr5 23772875 23772993 -175857157 + L2 LINE L2 3200 3313 0 1257 209 73 42 chr5 23773161 23773457 -175856693 + MER58B DNA MER1_type 1 309 -2111 1577 238 8 8 chr5 23773457 23773822 -175856328 + MLT1A1 LTR MaLR 1 365 0 1257 209 73 42 chr5 23773822 23773855 -175856295 + MER58B DNA MER1_type 309 340 -1 1960 182 91 94 chr5 23773856 23774347 -175855803 + MLT2B3 LTR ERVL 7 497 -57 473 58 14 0 chr5 23774347 23774416 -175855734 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 1960 182 91 94 chr5 23774416 23774474 -175855676 + MLT2B3 LTR ERVL 497 554 0 262 260 80 30 chr5 23774633 23774733 -175855417 + L2 LINE L2 3209 3313 0 1758 161 67 28 chr5 23776917 23777278 -175852872 - THE1C LTR MaLR 0 375 1 1425 156 22 43 chr5 23779299 23779575 -175850575 - THE1C LTR MaLR -105 270 1 545 100 18 18 chr5 23780087 23780197 -175849953 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 490 233 62 40 chr5 23780895 23781071 -175849079 - MER63A DNA MER1_type -28 182 3 22 0 0 0 chr5 23781916 23781938 -175848212 + AT_rich Low_complexity Low_complexity 1 22 0 323 296 92 34 chr5 23782415 23782621 -175847529 + HAL1 LINE L1 803 1020 -1487 2205 134 33 19 chr5 23782958 23783317 -175846833 + THE1B LTR MaLR 1 364 0 26 64 0 0 chr5 23784315 23784362 -175845788 + AT_rich Low_complexity Low_complexity 1 47 0 309 281 36 66 chr5 23784379 23784575 -175845575 + HAL1 LINE L1 2285 2474 -33 23 0 0 0 chr5 23784919 23784942 -175845208 + AT_rich Low_complexity Low_complexity 1 23 0 214 130 19 19 chr5 23785604 23785658 -175844492 + (TA)n Simple_repeat Simple_repeat 2 55 0 22 35 0 0 chr5 23786379 23786408 -175843742 + AT_rich Low_complexity Low_complexity 1 29 0 211 281 0 0 chr5 23786946 23787003 -175843147 + CT-rich Low_complexity Low_complexity 4 60 0 907 246 42 0 chr5 23787130 23787390 -175842760 - MER63C DNA MER1_type -11 919 649 857 246 21 32 chr5 23787396 23787680 -175842470 + MER63C DNA MER1_type 82 362 -568 754 264 74 0 chr5 23787693 23787909 -175842241 - MER63C DNA MER1_type -281 649 418 387 0 0 0 chr5 23787939 23787982 -175842168 + (CA)n Simple_repeat Simple_repeat 2 44 0 1023 178 171 41 chr5 23787983 23788252 -175841898 - MER7A DNA MER2_type -1 345 44 294 95 0 0 chr5 23788281 23788323 -175841827 + (TG)n Simple_repeat Simple_repeat 1 42 0 1143 204 7 3 chr5 23788341 23788604 -175841546 - MLT2D LTR ERVL -60 337 1 1134 264 19 42 chr5 23788604 23789031 -175841119 - MER63C DNA MER1_type -512 418 2 1239 251 14 38 chr5 23789625 23789996 -175840154 - MLT1A2 LTR MaLR -1 373 12 423 348 39 29 chr5 23790112 23790319 -175839831 + LTR16A LTR ERVL 128 336 -114 315 385 17 0 chr5 23790334 23790451 -175839699 + LTR16A LTR ERVL 218 336 -114 22 0 0 0 chr5 23790662 23790684 -175839466 + AT_rich Low_complexity Low_complexity 1 22 0 336 274 47 22 chr5 23791703 23791849 -175838301 + MLT2F LTR ERVL 10 159 -469 368 318 0 0 chr5 23791951 23792068 -175838082 + MLT2E LTR ERVL 532 624 -4 29 0 0 0 chr5 23792820 23792849 -175837301 + AT_rich Low_complexity Low_complexity 1 29 0 2037 144 36 28 chr5 23793119 23793479 -175836671 - THE1B LTR MaLR 0 364 2 238 314 12 24 chr5 23793596 23793765 -175836385 + (TA)n Simple_repeat Simple_repeat 2 168 0 2089 113 3 0 chr5 23793906 23794198 -175835952 + AluSg SINE Alu 2 294 -16 22 70 0 0 chr5 23794795 23794838 -175835312 + AT_rich Low_complexity Low_complexity 1 43 0 307 341 84 0 chr5 23795461 23795628 -175834522 + MLT1I LTR MaLR 5 185 -224 340 240 8 132 chr5 23795680 23795801 -175834349 + MLT1H LTR MaLR 35 172 -377 293 318 11 0 chr5 23795930 23796018 -175834132 + MLT1H LTR MaLR 304 392 -163 527 294 44 6 chr5 23796088 23796248 -175833902 - MER5A DNA MER1_type -22 167 2 21 36 0 0 chr5 23796399 23796427 -175833723 + AT_rich Low_complexity Low_complexity 1 28 0 1345 261 105 48 chr5 23796510 23796883 -175833267 - MLT1E LTR MaLR 0 593 180 2093 139 0 0 chr5 23796883 23797186 -175832964 + AluSx SINE Alu 1 303 -9 1345 261 105 48 chr5 23797186 23797334 -175832816 - MLT1E LTR MaLR -413 180 42 22 56 0 0 chr5 23797419 23797455 -175832695 + AT_rich Low_complexity Low_complexity 1 36 0 227 271 129 29 chr5 23797679 23797819 -175832331 - L1MC/D LINE L1 -1927 5881 5728 331 305 48 62 chr5 23797851 23798222 -175831928 - L1MC/D LINE L1 -2147 5661 5296 766 309 125 22 chr5 23798423 23798831 -175831319 + LTR16A LTR ERVL 1 450 0 253 241 0 0 chr5 23799022 23799076 -175831074 + MLT1H LTR MaLR 413 466 -1 291 113 0 0 chr5 23799124 23799177 -175830973 + (TCTG)n Simple_repeat Simple_repeat 2 54 0 512 309 78 64 chr5 23799192 23799693 -175830457 - L1MEd LINE L1 -4865 1254 747 375 210 85 45 chr5 23800458 23800634 -175829516 + L1MC5 LINE L1 7473 7655 -306 285 186 106 53 chr5 23801121 23801234 -175828916 + MIR SINE MIR 36 154 -108 29 104 0 0 chr5 23801538 23801644 -175828506 + AT_rich Low_complexity Low_complexity 1 106 0 222 214 0 0 chr5 23804119 23804175 -175825975 + (TA)n Simple_repeat Simple_repeat 2 57 0 1642 219 22 124 chr5 23804611 23805113 -175825037 - L1MB8 LINE L1 0 6989 6437 946 106 88 0 chr5 23805113 23805273 -175824877 - L1MA2 LINE L1 -9 6295 6122 646 140 9 19 chr5 23805273 23805380 -175824770 - U6 snRNA snRNA 0 107 2 1642 219 22 124 chr5 23805380 23805771 -175824379 - L1MB8 LINE L1 -550 6439 6187 311 145 35 208 chr5 23805785 23805939 -175824211 - LTR45 LTR ERV1 -7 518 350 1403 198 26 51 chr5 23806234 23806701 -175823449 - L1MB8 LINE L1 -767 6190 5752 6172 271 55 20 chr5 23806707 23809519 -175820631 - L1MB8 LINE L1 -1474 5483 2622 609 290 48 55 chr5 23809747 23810181 -175819969 - L1MB8 LINE L1 -4550 2409 1979 3727 289 69 27 chr5 23810189 23811804 -175818346 - L1MB8 LINE L1 -5158 1697 11 307 366 17 47 chr5 23811814 23811899 -175818251 - MER5B DNA MER1_type -3 175 96 180 0 0 0 chr5 23811899 23811919 -175818231 + (TTTAA)n Simple_repeat Simple_repeat 2 21 0 307 366 17 47 chr5 23811919 23812005 -175818145 - MER5B DNA MER1_type -82 96 9 2011 134 0 10 chr5 23812073 23812372 -175817778 - AluSq SINE Alu -17 296 1 22 35 0 0 chr5 23813828 23813857 -175816293 + AT_rich Low_complexity Low_complexity 1 29 0 39 60 0 0 chr5 23813951 23814018 -175816132 + AT_rich Low_complexity Low_complexity 1 67 0 3684 234 78 18 chr5 23817232 23817437 -175812713 - L1MA10 LINE L1 -32 6302 6111 1286 213 49 24 chr5 23817437 23817765 -175812385 + MER1B DNA MER1_type 1 336 -1 3684 234 78 18 chr5 23817765 23819308 -175810842 - L1MA10 LINE L1 -223 6111 4433 26 0 0 0 chr5 23819688 23819714 -175810436 + AT_rich Low_complexity Low_complexity 1 26 0 1788 176 0 13 chr5 23819773 23820079 -175810071 - AluSx SINE Alu -10 302 1 26 0 0 0 chr5 23821183 23821209 -175808941 + AT_rich Low_complexity Low_complexity 1 26 0 22 56 0 0 chr5 23821591 23821627 -175808523 + AT_rich Low_complexity Low_complexity 1 36 0 183 302 129 17 chr5 23821645 23821761 -175808389 + MIR SINE MIR 134 262 0 23 0 0 0 chr5 23822901 23822924 -175807226 + AT_rich Low_complexity Low_complexity 1 23 0 368 248 29 29 chr5 23823258 23823386 -175806764 - MER45A DNA AcHobo -22 156 30 1571 274 133 55 chr5 23823386 23823737 -175806413 + L1MD1 LINE L1 3555 3877 -2365 2199 115 0 0 chr5 23823737 23824042 -175806108 + AluSg SINE Alu 1 305 -5 1571 274 133 55 chr5 23824042 23825720 -175804430 + L1MD1 LINE L1 3877 5423 -819 2214 78 0 7 chr5 23825720 23826034 -175804116 - AluY SINE Alu 0 312 1 1571 274 133 55 chr5 23826034 23826180 -175803970 + L1MD1 LINE L1 5423 5556 -686 1790 150 150 5 chr5 23826180 23826554 -175803596 + MSTA LTR MaLR 1 428 0 1571 274 133 55 chr5 23826554 23826731 -175803419 + L1MD1 LINE L1 5556 6214 -28 180 97 0 0 chr5 23828230 23828261 -175801889 + (TG)n Simple_repeat Simple_repeat 2 32 0 624 213 24 0 chr5 23828778 23828905 -175801245 - MLT1D LTR MaLR -7 498 369 466 341 68 38 chr5 23829596 23829965 -175800185 + HAL1 LINE L1 780 1159 -1348 1876 141 36 28 chr5 23830355 23830716 -175799434 - THE1B LTR MaLR 0 364 1 9765 106 4 0 chr5 23830716 23832070 -175798080 - THE1B-int LTR MaLR 0 1580 222 1305 157 30 30 chr5 23832070 23832332 -175797818 - THE1A LTR MaLR -93 262 1 22 56 0 0 chr5 23832372 23832408 -175797742 + AT_rich Low_complexity Low_complexity 1 36 0 405 318 123 45 chr5 23832645 23833026 -175797124 + HAL1b LINE L1 438 848 -500 2146 198 74 2 chr5 23833079 23833523 -175796627 - MER31A LTR ERV1 -9 476 1 356 272 89 16 chr5 23834435 23834626 -175795524 + L1M4 LINE L1 4357 4561 -1585 981 169 13 0 chr5 23834629 23834783 -175795367 + MER70B LTR ERVL 4 159 -419 246 284 14 0 chr5 23834918 23834992 -175795158 - MLT1J LTR MaLR 0 511 437 1780 175 43 6 chr5 23834999 23835324 -175794826 - MER2 DNA MER2_type -6 339 3 497 324 61 44 chr5 23835378 23835721 -175794429 - MLT1J LTR MaLR -145 366 18 253 143 0 0 chr5 23835814 23835856 -175794294 + MLT1B LTR MaLR 1 42 -348 989 188 0 90 chr5 23835862 23836085 -175794065 + MLT1B LTR MaLR 188 390 0 1911 122 30 3 chr5 23836544 23836848 -175793302 - AluSx SINE Alu 0 312 1 27 0 0 0 chr5 23836987 23837014 -175793136 + AT_rich Low_complexity Low_complexity 1 27 0 32 0 0 0 chr5 23837664 23837696 -175792454 + AT_rich Low_complexity Low_complexity 1 32 0 29 70 0 0 chr5 23837811 23837868 -175792282 + AT_rich Low_complexity Low_complexity 1 57 0 23 86 0 0 chr5 23839467 23839525 -175790625 + AT_rich Low_complexity Low_complexity 1 58 0 23 0 0 0 chr5 23839630 23839653 -175790497 + AT_rich Low_complexity Low_complexity 1 23 0 183 162 0 0 chr5 23841254 23841291 -175788859 + A-rich Low_complexity Low_complexity 1 37 0 7062 219 97 13 chr5 23842518 23844136 -175786014 + L1MA7 LINE L1 11 1764 -5085 3696 213 50 22 chr5 23844132 23844842 -175785308 + L1MA7 LINE L1 5478 6166 -827 * 1996 117 0 38 chr5 23844842 23845158 -175784992 + AluSx SINE Alu 3 306 -6 3696 213 50 22 chr5 23845158 23845909 -175784241 + L1MA7 LINE L1 6166 6989 -4 30 27 0 0 chr5 23846620 23846657 -175783493 + AT_rich Low_complexity Low_complexity 1 37 0 2098 178 21 0 chr5 23847464 23847846 -175782304 - MLT1B LTR MaLR 0 390 1 369 288 23 0 chr5 23848431 23848563 -175781587 + (TATG)n Simple_repeat Simple_repeat 1 135 0 239 154 46 15 chr5 23848750 23848890 -175781260 + (TA)n Simple_repeat Simple_repeat 1 144 0 254 215 0 15 chr5 23850361 23850426 -175779724 + (TA)n Simple_repeat Simple_repeat 1 64 0 410 153 15 38 chr5 23850464 23850595 -175779555 + (TA)n Simple_repeat Simple_repeat 1 128 0 259 253 67 0 chr5 23850727 23850802 -175779348 + L1MEd LINE L1 1161 1240 -4879 4361 128 28 1 chr5 23850820 23851532 -175778618 + L1MA3 LINE L1 5567 6297 -8 25 0 0 0 chr5 23851534 23851559 -175778591 + AT_rich Low_complexity Low_complexity 1 25 0 231 177 16 16 chr5 23851564 23851626 -175778524 + T-rich Low_complexity Low_complexity 4 65 0 1248 263 129 16 chr5 23851897 23852595 -175777555 + L1MC/D LINE L1 4967 5739 -743 564 223 48 37 chr5 23852916 23853104 -175777046 + L1MC3 LINE L1 6915 7104 -681 357 162 0 44 chr5 23853113 23853181 -175776969 + MLT1F1 LTR MaLR 51 115 -452 1789 249 19 36 chr5 23853196 23853771 -175776379 + L1MD3 LINE L1 7430 7994 -1 26 0 0 0 chr5 23854284 23854310 -175775840 + AT_rich Low_complexity Low_complexity 1 26 0 284 310 9 43 chr5 23854573 23854689 -175775461 - HERV16 LTR ERVL -2056 3429 3318 1758 175 27 64 chr5 23855138 23855544 -175774606 - MER41D LTR ERV1 -11 546 156 345 88 0 128 chr5 23855635 23855737 -175774413 - MER41D LTR ERV1 -468 89 1 363 304 0 0 chr5 23855737 23855839 -175774311 - MER41D-int LTR ERV1 -4 5942 5841 2151 239 11 2 chr5 23855908 23856384 -175773766 - MER66-int LTR ERV1 -79 6597 6118 1275 157 18 27 chr5 23856872 23857095 -175773055 - MER66-int LTR ERV1 -1848 4828 4608 607 141 20 0 chr5 23857107 23857206 -175772944 - MER49 LTR ERV1 -208 715 615 * 1150 178 24 55 chr5 23857190 23857482 -175772668 - MER49 LTR ERV1 -633 290 8 1181 182 24 99 chr5 23857484 23857873 -175772277 - MER49-int LTR ERV1 0 7097 6379 561 150 196 0 chr5 23857873 23858003 -175772147 - MER49-int LTR ERV1 -624 6134 3950 727 168 10 117 chr5 23858183 23858380 -175771770 - MER49-int LTR ERV1 -4158 3962 3787 369 247 59 32 chr5 23858570 23858759 -175771391 - MER49-int LTR ERV1 -2136 4177 2607 * 705 180 86 36 chr5 23858753 23858975 -175771175 - MER41D-int LTR ERV1 -2635 3963 3731 644 183 11 63 chr5 23859008 23859183 -175770967 - MER41D-int LTR ERV1 -2869 3729 3564 1423 102 0 158 chr5 23859190 23859493 -175770657 - MER41D-int LTR ERV1 -6077 2043 1808 4059 155 4 1 chr5 23859493 23860176 -175769974 - L1PA15 LINE L1 0 6165 5481 1423 102 0 158 chr5 23860176 23860246 -175769904 - MER41D-int LTR ERV1 -6312 1808 1729 639 217 14 0 chr5 23860663 23860801 -175769349 - MER41D-int LTR ERV1 -6473 1647 1508 314 194 0 14 chr5 23860806 23860878 -175769272 - HERV16 LTR ERVL -4611 732 662 1888 73 12 0 chr5 23860879 23861138 -175769012 + L1PA5 LINE L1 5893 6154 0 1368 109 0 0 chr5 23861153 23861337 -175768813 + AluSg/x SINE Alu 129 312 0 1017 148 15 64 chr5 23861337 23861539 -175768611 - Tigger2a DNA MER2_type -242 192 1 363 118 10 88 chr5 23861545 23861647 -175768503 - L1 LINE L1 -1737 4409 4316 2044 160 0 0 chr5 23861673 23861973 -175768177 + AluSx SINE Alu 3 302 -10 464 177 0 0 chr5 23862271 23862350 -175767800 - AluJ/FRAM SINE Alu -15 297 219 1289 139 0 0 chr5 23862381 23862575 -175767575 - HERV16 LTR ERVL -4719 624 431 332 254 39 147 chr5 23862932 23863239 -175766911 - MER41D-int LTR ERV1 -7368 388 115 3502 145 2 19 chr5 23863368 23863934 -175766216 - MER41D LTR ERV1 -1 556 1 231 36 0 0 chr5 23864004 23864032 -175766118 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 509 298 13 13 chr5 23864048 23864206 -175765944 - HERV16 LTR ERVL -3826 1170 1013 253 390 7 0 chr5 23864616 23864752 -175765398 - HERV16 LTR ERVL -4380 616 480 2224 121 0 9 chr5 23865117 23865432 -175764718 - AluSx SINE Alu 0 312 1 307 315 24 0 chr5 23865526 23865653 -175764497 - LTR16C LTR ERVL -5 486 357 2172 102 7 13 chr5 23865858 23866163 -175763987 + AluY SINE Alu 1 303 -8 1231 214 8 0 chr5 23866223 23866457 -175763693 + AluJo SINE Alu 16 251 -61 1047 108 0 0 chr5 23866601 23866749 -175763401 - L1PA11 LINE L1 -3 6171 6024 22 35 0 0 chr5 23867389 23867418 -175762732 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 23868910 23868938 -175761212 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 23869500 23869528 -175760622 + AT_rich Low_complexity Low_complexity 1 28 0 195 100 0 0 chr5 23869578 23869608 -175760542 + (TA)n Simple_repeat Simple_repeat 2 31 0 270 0 0 0 chr5 23869629 23869659 -175760491 + (CA)n Simple_repeat Simple_repeat 1 30 0 1461 219 67 6 chr5 23869834 23870190 -175759960 + MLT1B LTR MaLR 13 390 0 500 294 65 45 chr5 23870660 23870997 -175759153 + MLT1L LTR MaLR 180 523 -92 27 0 0 0 chr5 23871004 23871031 -175759119 + AT_rich Low_complexity Low_complexity 1 27 0 339 164 0 0 chr5 23871031 23871092 -175759058 + (CA)n Simple_repeat Simple_repeat 2 62 0 201 322 11 11 chr5 23871201 23871291 -175758859 - MIR SINE MIR -56 206 117 2103 279 45 54 chr5 23871782 23872728 -175757422 + L1MEc LINE L1 44 981 -5415 792 292 64 8 chr5 23872833 23873083 -175757067 + LTR40b LTR ERVL 1 264 -198 2288 197 62 6 chr5 23873084 23873566 -175756584 - LTR22 LTR ERVK 0 509 1 2540 157 7 7 chr5 23873637 23874063 -175756087 - MSTA LTR MaLR -2 426 1 574 202 31 16 chr5 23874074 23874203 -175755947 + LTR40b LTR ERVL 332 462 0 1927 178 125 8 chr5 23874293 23874676 -175755474 + MSTA LTR MaLR 1 428 0 8147 169 19 48 chr5 23874678 23875477 -175754673 + MSTA-int LTR MaLR 3 824 -756 2078 104 4 7 chr5 23875477 23875757 -175754393 + AluSc SINE Alu 3 281 -28 261 57 0 0 chr5 23875757 23875792 -175754358 + (CA)n Simple_repeat Simple_repeat 2 36 0 8147 169 19 48 chr5 23875792 23876608 -175753542 + MSTA-int LTR MaLR 822 1571 -9 1485 202 161 8 chr5 23876618 23876984 -175753166 + MSTA LTR MaLR 5 426 -2 749 274 5 11 chr5 23877492 23877678 -175752472 + HERVL40 LTR ERVL 627 811 -4719 329 264 84 7 chr5 23877688 23877843 -175752307 + L1MEc LINE L1 1295 1461 -4935 836 190 178 30 chr5 23877844 23878113 -175752037 + LTR48 LTR ERV1 1 309 -478 445 231 114 78 chr5 23878123 23878438 -175751712 + LTR48 LTR ERV1 245 771 -16 325 341 63 33 chr5 23878460 23879061 -175751089 + L1MEc LINE L1 1470 2088 -4308 1309 150 63 0 chr5 23879069 23879276 -175750874 - Tigger7 DNA MER2_type -484 221 2 2440 188 24 17 chr5 23879276 23879819 -175750331 + L1MA10 LINE L1 5781 6327 -7 1566 272 48 6 chr5 23879822 23880574 -175749576 + L1MEc LINE L1 2116 2854 -3361 2849 6 0 3 chr5 23881321 23881633 -175748517 - AluY SINE Alu 0 311 1 829 167 87 66 chr5 23881683 23881891 -175748259 + L1MA7 LINE L1 5127 5351 -817 2273 91 3 3 chr5 23881891 23882199 -175747951 + AluY SINE Alu 1 308 -3 829 167 87 66 chr5 23882199 23882350 -175747800 + L1MA7 LINE L1 5351 5497 -671 790 173 8 0 chr5 23882375 23882508 -175747642 - MSTB LTR MaLR -291 135 2 3299 209 31 3 chr5 23882508 23883286 -175746864 + L1MA7 LINE L1 5492 6291 0 272 313 39 55 chr5 23883855 23884037 -175746113 - MLT1I LTR MaLR -130 279 101 654 182 5 143 chr5 23885357 23885566 -175744584 + MER20 DNA MER1_type 3 182 -37 28 0 0 0 chr5 23885577 23885605 -175744545 + AT_rich Low_complexity Low_complexity 1 28 0 223 252 178 56 chr5 23885759 23885866 -175744284 - MIR SINE MIR -30 232 113 890 223 28 98 chr5 23886272 23886723 -175743427 + MLT1A1 LTR MaLR 1 394 -2 245 234 63 81 chr5 23887321 23887432 -175742718 + LTR50 LTR ERVL 11 119 -676 248 348 22 11 chr5 23887606 23887698 -175742452 + LTR50 LTR ERVL 426 518 -277 1577 323 119 33 chr5 23887712 23887957 -175742193 - L2 LINE L2 -14 3299 3077 2241 109 0 3 chr5 23887957 23888259 -175741891 - AluSc SINE Alu -8 301 1 1577 323 119 33 chr5 23888259 23889094 -175741056 - L2 LINE L2 -236 3077 2135 763 224 19 0 chr5 23889983 23890144 -175740006 - FRAM SINE Alu -2 174 11 378 194 19 3 chr5 23890150 23890231 -175739919 - AluJ/FLAM SINE Alu -239 63 2 28 48 0 0 chr5 23890523 23890565 -175739585 + AT_rich Low_complexity Low_complexity 1 42 0 484 298 10 47 chr5 23890637 23890924 -175739226 + MLT1H LTR MaLR 43 422 -127 2714 238 32 6 chr5 23891020 23891709 -175738441 - L1MB4 LINE L1 -2 6178 5472 922 237 59 37 chr5 23891741 23892062 -175738088 - L1MB4 LINE L1 -3382 2764 2437 28 29 0 0 chr5 23893130 23893165 -175736985 + AT_rich Low_complexity Low_complexity 1 35 0 233 204 20 0 chr5 23893575 23893624 -175736526 + GA-rich Low_complexity Low_complexity 3 52 0 213 355 159 16 chr5 23893627 23893816 -175736334 + MIR SINE MIR 36 251 -11 428 283 126 28 chr5 23894442 23894695 -175735455 - L1ME3A LINE L1 -83 6087 5860 2093 150 25 11 chr5 23894695 23895054 -175735096 + THE1B LTR MaLR 1 364 0 428 283 126 28 chr5 23895054 23895337 -175734813 - L1ME3A LINE L1 -310 5860 5465 1863 162 0 0 chr5 23895566 23895868 -175734282 + AluSx SINE Alu 11 312 0 1929 168 41 27 chr5 23896822 23896995 -175733155 + LTR57 LTR ERVL 1 170 -241 462 36 0 0 chr5 23896995 23897051 -175733099 + (CA)n Simple_repeat Simple_repeat 1 56 0 1929 168 41 27 chr5 23897051 23897246 -175732904 + LTR57 LTR ERVL 170 374 -37 186 43 0 0 chr5 23897246 23897269 -175732881 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 10092 130 41 43 chr5 23897301 23898225 -175731925 + LTR57-int LTR ERVL 2 926 -4417 306 0 0 0 chr5 23898225 23898259 -175731891 + (TG)n Simple_repeat Simple_repeat 2 35 0 10092 130 41 43 chr5 23898259 23898986 -175731164 + LTR57-int LTR ERVL 926 1652 -3691 378 0 0 0 chr5 23898986 23899028 -175731122 + (TG)n Simple_repeat Simple_repeat 1 42 0 10092 130 41 43 chr5 23899028 23899208 -175730942 + LTR57-int LTR ERVL 1652 1831 -3512 * 10748 151 29 4 chr5 23899194 23901442 -175728708 + LTR57-int LTR ERVL 2626 4990 -353 2154 142 27 3 chr5 23902094 23902432 -175727718 + LTR57-int LTR ERVL 4998 5343 0 2313 145 46 8 chr5 23902434 23902828 -175727322 + LTR57 LTR ERVL 3 411 0 31 0 0 0 chr5 23902927 23902958 -175727192 + AT_rich Low_complexity Low_complexity 1 31 0 295 253 99 0 chr5 23904217 23904308 -175725842 + MLT1J2 LTR MaLR 63 162 -288 267 344 73 18 chr5 23904307 23904525 -175725625 + MLT1J1 LTR MaLR 217 446 0 * 21 36 0 0 chr5 23904795 23904823 -175725327 + AT_rich Low_complexity Low_complexity 1 28 0 321 221 8 16 chr5 23905199 23905321 -175724829 + (TA)n Simple_repeat Simple_repeat 1 121 0 21 0 0 0 chr5 23905341 23905362 -175724788 + AT_rich Low_complexity Low_complexity 1 21 0 2826 156 15 35 chr5 23905784 23906311 -175723839 - L1PA15 LINE L1 0 6165 5648 1958 132 35 59 chr5 23906311 23906682 -175723468 - THE1B LTR MaLR 0 364 3 4034 99 2 4 chr5 23906695 23907249 -175722901 - THE1B-int LTR MaLR -12 1568 1016 9385 263 20 24 chr5 23907249 23910848 -175719302 - L1PA13 LINE L1 -1938 4859 1272 313 279 114 80 chr5 23910856 23911057 -175719093 - L1PA13 LINE L1 -6025 762 555 * 772 340 38 8 chr5 23911039 23911301 -175718849 - L1PA13 LINE L1 -6517 270 1 231 370 119 18 chr5 23911715 23911942 -175718208 - L2 LINE L2 -708 2606 2357 494 309 142 27 chr5 23911961 23912416 -175717734 + L2 LINE L2 2657 3149 -164 325 267 81 0 chr5 23912547 23912633 -175717517 - L2 LINE L2 -1006 2308 2216 205 200 0 0 chr5 23913406 23913446 -175716704 + A-rich Low_complexity Low_complexity 1 40 0 2344 70 0 19 chr5 23913674 23913986 -175716164 + AluY SINE Alu 6 311 0 26 0 0 0 chr5 23914496 23914522 -175715628 + AT_rich Low_complexity Low_complexity 1 26 0 863 191 53 5 chr5 23914696 23914885 -175715265 - MER2 DNA MER2_type -135 210 13 23 0 0 0 chr5 23914936 23914959 -175715191 + AT_rich Low_complexity Low_complexity 1 23 0 631 260 18 6 chr5 23916068 23916237 -175713913 - L1MA10 LINE L1 -8 6326 6156 4200 188 24 20 chr5 23916273 23917315 -175712835 - L1MB1 LINE L1 -8 6160 5109 2002 126 7 10 chr5 23917328 23917630 -175712520 - AluSg SINE Alu -1 309 9 2157 200 7 99 chr5 23918276 23918840 -175711310 - MLT2B2 LTR ERVL -3 512 1 23 0 0 0 chr5 23918965 23918988 -175711162 + AT_rich Low_complexity Low_complexity 1 23 0 532 248 40 24 chr5 23919842 23919967 -175710183 - MER58B DNA MER1_type -17 324 198 1980 203 129 28 chr5 23919975 23920352 -175709798 + MER39 LTR ERV1 7 345 -362 2479 66 0 0 chr5 23920352 23920654 -175709496 - AluY SINE Alu -9 302 1 1980 203 129 28 chr5 23920654 23920876 -175709274 + MER39 LTR ERV1 345 707 0 1623 202 50 22 chr5 23921211 23921572 -175708578 + MLT1B LTR MaLR 20 390 0 383 354 83 43 chr5 23923314 23923735 -175706415 + HERVL LTR ERVL 1736 2173 -3481 658 359 52 20 chr5 23923865 23924369 -175705781 + HERVL LTR ERVL 2381 2900 -2096 1269 215 83 12 chr5 23924925 23925250 -175704900 + MER7A DNA MER2_type 1 346 0 3240 171 52 27 chr5 23925867 23927015 -175703135 - pTR5 LTR ERV1 -133 1523 5 40 49 0 0 chr5 23927801 23927862 -175702288 + AT_rich Low_complexity Low_complexity 1 61 0 260 109 0 22 chr5 23927952 23927998 -175702152 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 1914 162 7 0 chr5 23927998 23928307 -175701843 - AluSq SINE Alu -2 311 1 195 42 0 0 chr5 23928311 23928335 -175701815 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 2501 34 0 0 chr5 23928337 23928634 -175701516 - L1PA4 LINE L1 -13 6142 5846 2091 137 53 8 chr5 23929062 23929421 -175700729 - THE1C LTR MaLR 0 375 1 33 0 0 0 chr5 23929432 23929465 -175700685 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 23929710 23929731 -175700419 + AT_rich Low_complexity Low_complexity 1 21 0 344 260 36 88 chr5 23929810 23930002 -175700148 + L1M4b LINE L1 762 943 -5916 1317 257 39 56 chr5 23930048 23930713 -175699437 + L1M4b LINE L1 1123 1882 -5065 252 200 64 120 chr5 23930718 23930843 -175699307 + L1M4b LINE L1 3447 3564 -3393 * 688 273 86 57 chr5 23930842 23931408 -175698742 + L1M3c LINE L1 1229 1781 -4563 1897 129 7 42 chr5 23931641 23931822 -175698328 - AluSx SINE Alu -4 308 141 2307 91 0 7 chr5 23931822 23932131 -175698019 - AluY SINE Alu -2 309 3 1897 129 7 42 chr5 23932131 23932258 -175697892 - AluSx SINE Alu -171 141 11 4343 209 11 13 chr5 23932697 23932820 -175697330 - L1 LINE L1 -1371 4775 4653 4645 96 23 25 chr5 23932820 23933508 -175696642 - LTR12 LTR ERV1 -1 687 1 4343 209 11 13 chr5 23933508 23934409 -175695741 - L1 LINE L1 -1493 4653 3753 14281 27 1 0 chr5 23934410 23936109 -175694041 + L1P LINE L1 3355 5054 -1092 2295 215 15 17 chr5 23936107 23936396 -175693754 - L1 LINE L1 -2389 3757 3469 * 2552 17 0 10 chr5 23936396 23936689 -175693461 - AluYa5 SINE Alu -21 290 1 2295 215 15 17 chr5 23936689 23936995 -175693155 - L1 LINE L1 -2677 3469 3163 3554 153 59 26 chr5 23936995 23937364 -175692786 + L1PB4 LINE L1 5405 5760 -396 288 0 0 0 chr5 23937364 23937396 -175692754 + (TA)n Simple_repeat Simple_repeat 1 32 0 3554 153 59 26 chr5 23937396 23937750 -175692400 + L1PB4 LINE L1 5760 6153 -3 23 54 0 0 chr5 23937750 23937787 -175692363 + AT_rich Low_complexity Low_complexity 1 37 0 432 0 0 0 chr5 23937858 23937906 -175692244 + (TA)n Simple_repeat Simple_repeat 2 49 0 2353 75 0 3 chr5 23937910 23938217 -175691933 - AluY SINE Alu 0 311 6 1969 133 20 0 chr5 23938499 23938793 -175691357 - AluSx SINE Alu -8 304 5 230 278 0 0 chr5 23938860 23938932 -175691218 - L1M4 LINE L1 -942 5204 5133 23 0 0 0 chr5 23938951 23938974 -175691176 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 23938998 23939019 -175691131 + AT_rich Low_complexity Low_complexity 1 21 0 2325 94 0 0 chr5 23939561 23939870 -175690280 - AluY SINE Alu -2 309 1 21 57 0 0 chr5 23939994 23940029 -175690121 + AT_rich Low_complexity Low_complexity 1 35 0 2814 173 19 0 chr5 23940030 23940516 -175689634 - Tigger1 DNA MER2_type -1 2417 1923 5767 144 14 37 chr5 23940540 23941583 -175688567 - Tigger1 DNA MER2_type -618 1800 782 866 256 123 102 chr5 23941571 23942060 -175688090 + MLT1E LTR MaLR 67 591 -2 * 228 311 33 49 chr5 23943336 23943458 -175686692 + L1MDa LINE L1 871 990 -5433 1283 288 54 46 chr5 23943529 23943656 -175686494 + L1MDa LINE L1 1147 1271 -5670 2451 74 0 0 chr5 23943656 23943966 -175686184 + AluY SINE Alu 1 310 -1 1283 288 54 46 chr5 23943966 23944940 -175685210 + L1MDa LINE L1 1271 2363 -4578 432 276 130 80 chr5 23944943 23945077 -175685073 + L1MDa LINE L1 2485 2611 -4511 2183 77 0 11 chr5 23945077 23945406 -175684744 - AluY SINE Alu 0 326 1 432 276 130 80 chr5 23945406 23945632 -175684518 + L1MDa LINE L1 2611 2864 -4258 8791 211 86 19 chr5 23945639 23945701 -175684449 + L1MA8 LINE L1 3379 3435 -3651 201 94 0 0 chr5 23945701 23945733 -175684417 + (TA)n Simple_repeat Simple_repeat 2 33 0 1447 199 0 70 chr5 23945733 23946060 -175684090 - AluJo SINE Alu -8 304 1 8791 211 86 19 chr5 23946060 23946795 -175683355 + L1MA8 LINE L1 3435 4119 -2967 2634 99 0 0 chr5 23946795 23947150 -175683000 - THE1A LTR MaLR 0 355 1 8791 211 86 19 chr5 23947150 23947755 -175682395 + L1MA8 LINE L1 4119 4682 -2404 2016 139 0 0 chr5 23947755 23948043 -175682107 + AluSc SINE Alu 3 290 -19 8791 211 86 19 chr5 23948043 23949843 -175680307 + L1MA8 LINE L1 4682 6807 -279 608 263 62 4 chr5 23949954 23950214 -175679936 + L1MDa LINE L1 2918 3193 -3748 182 191 76 0 chr5 23950513 23950644 -175679506 + (TA)n Simple_repeat Simple_repeat 1 141 0 246 158 50 25 chr5 23950671 23950791 -175679359 + (TA)n Simple_repeat Simple_repeat 2 124 0 245 188 14 58 chr5 23951753 23951822 -175678328 + L1MEc LINE L1 1556 1621 -4775 327 277 201 25 chr5 23951930 23952089 -175678061 + L1ME LINE L1 5626 5812 -358 23 0 0 0 chr5 23952136 23952159 -175677991 + AT_rich Low_complexity Low_complexity 1 23 0 908 185 7 0 chr5 23952538 23952689 -175677461 - FRAM SINE Alu -11 165 14 1024 272 94 3 chr5 23952713 23953055 -175677095 - MLT1A2 LTR MaLR -1 373 1 1846 183 64 21 chr5 23953067 23953359 -175676791 + MER65A LTR ERV1 3 320 -125 2010 134 6 16 chr5 23953359 23953672 -175676478 - AluSx SINE Alu -2 310 1 1846 183 64 21 chr5 23953672 23953799 -175676351 + MER65A LTR ERV1 320 440 -5 991 238 33 61 chr5 23953836 23954405 -175675745 + MER65A-int LTR ERV1 35 640 -4231 465 216 11 63 chr5 23954440 23954475 -175675675 - MER54B LTR ERVL -563 230 195 2043 207 130 56 chr5 23954475 23955242 -175674908 - LTR1B LTR ERV1 -2 824 1 465 216 11 63 chr5 23955242 23955371 -175674779 - MER54B LTR ERVL -598 195 95 422 230 3 90 chr5 23955437 23955595 -175674555 + MER65A-int LTR ERV1 689 896 -890 1024 170 44 126 chr5 23955796 23956226 -175673924 + MER65A-int LTR ERV1 1158 1552 -3319 4070 136 40 61 chr5 23956226 23956996 -175673154 - LTR1 LTR ERV1 0 785 32 1691 190 91 79 chr5 23957056 23957853 -175672297 + MER65A-int LTR ERV1 954 1913 -5903 664 232 34 125 chr5 23957975 23958610 -175671540 + MER65A-int LTR ERV1 1541 2276 -4482 321 236 87 55 chr5 23959020 23959147 -175671003 + MER65A-int LTR ERV1 3601 3731 -2867 876 195 92 111 chr5 23959228 23960271 -175669879 + MER65A-int LTR ERV1 2528 4745 -1586 712 222 157 22 chr5 23960273 23960503 -175669647 + LTR1B LTR ERV1 90 350 -476 1840 133 71 40 chr5 23960516 23960869 -175669281 - LTR10A LTR ERV1 -61 548 185 2127 180 82 18 chr5 23961006 23961457 -175668693 + LTR1B LTR ERV1 347 826 0 2782 255 61 57 chr5 23961472 23962047 -175668103 + MER65A-int LTR ERV1 2991 3562 -1309 2437 77 0 6 chr5 23962047 23962358 -175667792 - AluY SINE Alu -2 309 1 2782 255 61 57 chr5 23962358 23962959 -175667191 + MER65A-int LTR ERV1 3562 4172 -699 1690 265 35 25 chr5 23963057 23963369 -175666781 + MER65A-int LTR ERV1 4345 4653 -218 2364 116 52 0 chr5 23963369 23963713 -175666437 - THE1B LTR MaLR 0 364 3 10491 115 12 27 chr5 23963719 23965318 -175664832 - THE1B-int LTR MaLR -4 1576 1 2526 123 0 6 chr5 23965318 23965684 -175664466 - THE1B LTR MaLR 0 364 1 1690 265 35 25 chr5 23965684 23965884 -175664266 + MER65A-int LTR ERV1 4656 4870 -1 1674 176 66 55 chr5 23965885 23966323 -175663827 + MER65A LTR ERV1 1 443 -2 495 251 166 27 chr5 23966979 23967343 -175662807 - MER57A LTR ERV1 0 403 22 1398 220 0 31 chr5 23967799 23968090 -175662060 - AluJo SINE Alu -30 282 1 3886 198 39 18 chr5 23968108 23969010 -175661140 - L1MC2 LINE L1 -1 6343 5423 22 0 0 0 chr5 23969033 23969055 -175661095 + AT_rich Low_complexity Low_complexity 1 22 0 286 310 11 0 chr5 23969267 23969354 -175660796 - L2 LINE L2 -5 3308 3221 670 271 14 14 chr5 23970971 23971181 -175658969 + MER58A DNA MER1_type 7 216 -8 280 127 62 49 chr5 23971548 23971627 -175658523 - L1P5 LINE L1 -309 5845 5767 325 295 93 51 chr5 23971920 23972007 -175658143 - L1ME LINE L1 -595 5569 5487 783 261 84 72 chr5 23972007 23972236 -175657914 + MLT1D LTR MaLR 1 226 -279 186 43 0 0 chr5 23972236 23972259 -175657891 + (ATGTG)n Simple_repeat Simple_repeat 5 27 0 783 261 84 72 chr5 23972259 23972528 -175657622 + MLT1D LTR MaLR 226 505 0 325 295 93 51 chr5 23972528 23972677 -175657473 - L1ME LINE L1 -677 5487 5323 4999 142 14 42 chr5 23973081 23973933 -175656217 - L1MA3 LINE L1 0 6305 5430 273 57 0 0 chr5 23973933 23973968 -175656182 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2173 89 4 4 chr5 23973970 23974250 -175655900 - AluSc SINE Alu -29 280 1 4999 142 14 42 chr5 23974250 23974341 -175655809 - L1MA3 LINE L1 -876 5429 5386 1140 158 76 3 chr5 23974337 23974628 -175655522 - L1M1 LINE L1 -3942 3623 3312 * 966 108 0 0 chr5 23974631 23974760 -175655390 + AluY SINE Alu 1 129 -182 183 152 0 0 chr5 23974763 23974809 -175655341 + (TA)n Simple_repeat Simple_repeat 2 47 0 1242 123 0 0 chr5 23974811 23974990 -175655160 + AluSg/x SINE Alu 131 309 -3 12330 150 40 17 chr5 23974990 23975509 -175654641 - L1M1 LINE L1 -4247 3318 2812 2007 179 87 5 chr5 23975509 23975933 -175654217 + LOR1b LTR ERV1 1 459 -2 12330 150 40 17 chr5 23975933 23976120 -175654030 - L1M1 LINE L1 -4753 2812 2631 2285 88 16 3 chr5 23976120 23976426 -175653724 - AluY SINE Alu -1 310 1 12330 150 40 17 chr5 23976426 23977889 -175652261 - L1M1 LINE L1 -4934 2631 1099 545 172 43 9 chr5 23977886 23978002 -175652148 - L1M1 LINE L1 -7432 133 14 * 286 329 0 7 chr5 23978235 23978387 -175651763 - L1ME LINE L1 -1478 4668 4518 207 351 79 18 chr5 23978650 23978764 -175651386 + L2 LINE L2 691 811 -2503 1632 128 4 0 chr5 23978822 23979056 -175651094 - LTR12 LTR ERV1 0 714 480 322 263 10 0 chr5 23979056 23979155 -175650995 - LTR30 LTR ERV1 -79 643 544 1339 81 46 136 chr5 23979155 23979463 -175650687 - LTR12 LTR ERV1 -437 1683 57 270 211 0 0 chr5 23979463 23979515 -175650635 - LTR30 LTR ERV1 -670 52 1 1894 113 3 53 chr5 23980914 23981252 -175648898 + AluSx SINE Alu 1 323 0 1385 221 0 41 chr5 23982020 23982337 -175647813 + AluJo SINE Alu 2 305 -7 2558 65 0 0 chr5 23982691 23983000 -175647150 - AluY SINE Alu -1 310 2 292 317 108 41 chr5 23983147 23983415 -175646735 + L2 LINE L2 75 360 -2954 361 299 110 16 chr5 23983596 23983850 -175646300 - L2 LINE L2 -102 3211 2934 1819 145 4 0 chr5 23984313 23984582 -175645568 - AluSx SINE Alu -10 302 33 465 203 86 48 chr5 23985821 23986008 -175644142 - L1ME LINE L1 -672 5494 5301 659 311 58 48 chr5 23986329 23986395 -175643755 - L1MEc LINE L1 -5837 559 495 4498 157 36 27 chr5 23986395 23987259 -175642891 + MER4D LTR ERV1 1 872 0 659 311 58 48 chr5 23987259 23987607 -175642543 - L1MEc LINE L1 -5901 495 141 24 67 0 0 chr5 23987901 23987946 -175642204 + AT_rich Low_complexity Low_complexity 1 45 0 730 240 89 36 chr5 23988011 23988370 -175641780 + LTR37B LTR ERV1 86 463 -5 273 169 0 0 chr5 23988479 23988538 -175641612 + CT-rich Low_complexity Low_complexity 2 60 0 477 0 0 0 chr5 23988551 23988604 -175641546 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 237 65 0 0 chr5 23988647 23988678 -175641472 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 25 31 0 0 chr5 23989272 23989304 -175640846 + AT_rich Low_complexity Low_complexity 1 32 0 2319 81 0 3 chr5 23989309 23989605 -175640545 + AluY SINE Alu 1 295 -16 24 53 0 0 chr5 23989705 23989743 -175640407 + AT_rich Low_complexity Low_complexity 1 38 0 2215 101 3 3 chr5 23989914 23990212 -175639938 - AluY SINE Alu -13 298 1 1586 197 145 18 chr5 23990327 23990707 -175639443 - MSTA LTR MaLR 0 428 1 9130 153 6 35 chr5 23990707 23992332 -175637818 - MSTA-int LTR MaLR 0 1580 3 1973 152 134 11 chr5 23992334 23992715 -175637435 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr5 23993144 23993168 -175636982 + AT_rich Low_complexity Low_complexity 1 24 0 2356 78 0 0 chr5 23993851 23994146 -175636004 - AluY SINE Alu -16 295 1 927 282 157 11 chr5 23994192 23994643 -175635507 - LTR55 LTR ERV -12 536 20 4736 84 9 19 chr5 23994955 23995622 -175634528 + PABL_A LTR ERV1 1 660 0 374 298 48 52 chr5 23995627 23995875 -175634275 + MER31-int LTR ERV1 3814 4060 -876 1908 238 17 62 chr5 23996093 23996159 -175633991 + MLT2B1 LTR ERVL 3 70 -450 2359 43 0 0 chr5 23996159 23996435 -175633715 - AluY SINE Alu -13 298 23 1908 238 17 62 chr5 23996435 23996874 -175633276 + MLT2B1 LTR ERVL 70 485 -35 356 0 23 0 chr5 23996874 23996918 -175633232 + (CA)n Simple_repeat Simple_repeat 2 46 0 1908 238 17 62 chr5 23996918 23996945 -175633205 + MLT2B1 LTR ERVL 485 512 -8 2359 84 0 13 chr5 23997058 23997368 -175632782 + AluSg SINE Alu 1 306 -4 629 222 12 18 chr5 23997530 23997701 -175632449 + LTR37B LTR ERV1 82 251 -217 983 203 162 12 chr5 23997780 23998101 -175632049 - L1MB8 LINE L1 -6 6172 5804 2147 88 7 20 chr5 23998467 23998763 -175631387 - AluSx SINE Alu -20 292 1 282 160 0 0 chr5 24000386 24000436 -175629714 + (TA)n Simple_repeat Simple_repeat 1 50 0 703 215 17 57 chr5 24000470 24000647 -175629503 - MER82 DNA MER2_type -1 652 483 485 249 45 51 chr5 24000636 24000813 -175629337 - MER82 DNA MER2_type -116 537 362 * 27 62 0 0 chr5 24001158 24001206 -175628944 + AT_rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr5 24001815 24001837 -175628313 + AT_rich Low_complexity Low_complexity 1 22 0 1448 276 31 71 chr5 24002161 24002708 -175627442 + MLT2B3 LTR ERVL 20 544 -10 222 116 0 0 chr5 24003155 24003198 -175626952 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2593 44 0 16 chr5 24004166 24004482 -175625668 + AluY SINE Alu 1 311 0 434 0 35 0 chr5 24004786 24004843 -175625307 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2123 81 3 11 chr5 24004843 24005128 -175625022 - AluY SINE Alu -28 283 1 390 234 83 76 chr5 24005527 24005817 -175624333 - MER69 DNA AcHobo -7 2519 2228 21 0 0 0 chr5 24005925 24005946 -175624204 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 67 chr5 24006195 24006240 -175623910 + AT_rich Low_complexity Low_complexity 1 42 0 195 42 0 0 chr5 24007046 24007070 -175623080 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1960 113 40 0 chr5 24007076 24007350 -175622800 - AluSc SINE Alu -24 285 1 2113 118 0 13 chr5 24007748 24008062 -175622088 + AluSq SINE Alu 1 310 -3 2561 105 14 3 chr5 24008395 24008766 -175621384 - THE1C LTR MaLR 0 375 1 193 98 49 0 chr5 24008845 24008886 -175621264 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 1936 187 36 51 chr5 24008890 24009360 -175620790 - MLT1C LTR MaLR -3 464 2 180 97 0 0 chr5 24011299 24011330 -175618820 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 759 97 0 0 chr5 24011332 24011435 -175618715 - AluY SINE Alu -28 283 181 209 313 62 0 chr5 24011539 24011619 -175618531 + L2 LINE L2 3226 3310 -3 181 343 14 79 chr5 24012062 24012202 -175617948 + MIR SINE MIR 23 153 -109 205 246 9 64 chr5 24013695 24013805 -175616345 + GA-rich Low_complexity Low_complexity 1 104 0 202 118 0 29 chr5 24016496 24016530 -175613620 + (GAAAA)n Simple_repeat Simple_repeat 4 36 0 315 122 0 0 chr5 24016540 24016589 -175613561 + (GGAA)n Simple_repeat Simple_repeat 4 52 0 326 196 128 0 chr5 24017299 24017401 -175612749 - L1M4 LINE L1 -2977 3169 3055 723 320 137 22 chr5 24017569 24018162 -175611988 + L2 LINE L2 1287 1947 -1367 251 294 29 0 chr5 24018925 24018993 -175611157 + L1ME LINE L1 5699 5768 -402 1525 168 39 13 chr5 24018993 24019446 -175610704 + L1M2 LINE L1 5113 5572 -728 * 16646 205 22 11 chr5 24019438 24020279 -175609871 + L1PA14 LINE L1 2617 3448 -4151 1794 32 9 0 chr5 24020279 24020498 -175609652 + L1PA4 LINE L1 5932 6152 -3 204 97 0 0 chr5 24020503 24020534 -175609616 + (CA)n Simple_repeat Simple_repeat 2 32 0 16646 205 22 11 chr5 24020534 24020680 -175609470 + L1PA14 LINE L1 3451 3594 -4005 1959 134 0 0 chr5 24020680 24020956 -175609194 + AluSg SINE Alu 25 300 -10 16646 205 22 11 chr5 24020956 24024887 -175605263 + L1PA14 LINE L1 3594 7596 -3 223 203 29 29 chr5 24026455 24026524 -175603626 + (TATATG)n Simple_repeat Simple_repeat 4 72 0 396 293 95 64 chr5 24026673 24026956 -175603194 + L1MEd LINE L1 949 1240 -4879 479 231 189 18 chr5 24027032 24027201 -175602949 - MER58A DNA MER1_type 0 224 27 21 57 0 0 chr5 24027692 24027727 -175602423 + AT_rich Low_complexity Low_complexity 1 35 0 2320 86 0 10 chr5 24027812 24028113 -175602037 + AluY SINE Alu 1 298 -13 298 256 73 0 chr5 24028519 24028601 -175601549 + L1ME3A LINE L1 5383 5470 -2338 254 309 47 27 chr5 24028886 24029035 -175601115 - MLT1H LTR MaLR -368 181 30 21 0 0 0 chr5 24029342 24029363 -175600787 + AT_rich Low_complexity Low_complexity 1 21 0 1429 171 50 64 chr5 24029591 24029948 -175600202 - THE1C LTR MaLR -21 354 3 181 258 56 101 chr5 24030977 24031066 -175599084 + MIR SINE MIR 79 163 -99 22 0 0 0 chr5 24032736 24032758 -175597392 + AT_rich Low_complexity Low_complexity 1 22 0 378 0 0 0 chr5 24032875 24032917 -175597233 + (CA)n Simple_repeat Simple_repeat 1 42 0 23 33 0 0 chr5 24032950 24032980 -175597170 + AT_rich Low_complexity Low_complexity 1 30 0 187 233 0 0 chr5 24033101 24033144 -175597006 + L2 LINE L2 3263 3305 -8 1721 169 7 7 chr5 24134080 24134376 -175495774 - AluSx SINE Alu -16 296 1 405 0 0 0 chr5 24134449 24134494 -175495656 + (TG)n Simple_repeat Simple_repeat 2 46 0 1396 179 63 36 chr5 24134575 24134876 -175495274 + AluJb SINE Alu 1 309 -3 2261 89 7 0 chr5 24135772 24136054 -175494096 - AluSx SINE Alu -20 292 9 22 35 0 0 chr5 24136238 24136267 -175493883 + AT_rich Low_complexity Low_complexity 1 29 0 835 176 0 55 chr5 24136275 24136457 -175493693 - FAM SINE Alu -3 172 1 281 263 112 6 chr5 24137118 24137297 -175492853 + L1ME3A LINE L1 5745 5942 -179 2168 113 10 0 chr5 24137445 24137736 -175492414 + AluSg SINE Alu 1 294 -16 867 295 97 40 chr5 24137911 24138355 -175491795 + MLT1J LTR MaLR 32 500 -11 1125 135 5 25 chr5 24138666 24138866 -175491284 - L1P LINE L1 -2149 3997 3802 1289 131 5 15 chr5 24138867 24139073 -175491077 - L1P LINE L1 -3488 2658 2455 404 175 25 0 chr5 24139116 24139196 -175490954 - L1P LINE L1 -3825 2321 2240 2743 98 3 11 chr5 24139196 24139554 -175490596 - THE1A LTR MaLR 0 355 1 11790 105 3 9 chr5 24139554 24141143 -175489007 - THE1A-int LTR MaLR 0 1580 1 2405 77 15 6 chr5 24141143 24141470 -175488680 - THE1A LTR MaLR 0 355 26 256 177 25 13 chr5 24142488 24142639 -175487511 + (TA)n Simple_repeat Simple_repeat 1 152 0 317 246 76 123 chr5 24142681 24142998 -175487152 - MLT1J2 LTR MaLR -8 442 100 511 271 73 7 chr5 24143546 24143697 -175486453 + MIR3 SINE MIR 21 181 -27 297 331 34 11 chr5 24144105 24144268 -175485882 + MIR SINE MIR 20 183 -65 395 296 17 9 chr5 24145352 24145467 -175484683 - L2 LINE L2 -11 3302 3187 249 234 31 0 chr5 24149160 24149224 -175480926 + L1ME3A LINE L1 6097 6162 -8 1594 169 7 28 chr5 24150223 24150507 -175479643 + AluJo SINE Alu 13 290 -22 2358 85 7 0 chr5 24151012 24151305 -175478845 + AluSg SINE Alu 1 295 -15 30 0 0 0 chr5 24151516 24151546 -175478604 + AT_rich Low_complexity Low_complexity 1 30 0 1861 148 6 19 chr5 24151559 24151870 -175478280 + AluSx SINE Alu 1 307 -5 363 307 67 22 chr5 24153284 24153463 -175476687 - L2 LINE L2 -512 2802 2616 602 333 52 4 chr5 24153567 24153816 -175476334 - L2 LINE L2 -1899 1415 1155 378 286 161 26 chr5 24155656 24155848 -175474302 + L2 LINE L2 2437 2654 -660 757 201 62 6 chr5 24155905 24156084 -175474066 + MER5A DNA MER1_type 1 189 0 1837 184 0 3 chr5 24157128 24157422 -175472728 + AluJo SINE Alu 1 293 -19 1505 81 0 5 chr5 24158135 24158357 -175471793 - pTR5 LTR ERV1 -2046 392 172 336 248 10 0 chr5 24158360 24158461 -175471689 - LTR30 LTR ERV1 -80 642 541 1242 137 81 53 chr5 24158462 24158747 -175471403 - pTR5 LTR ERV1 -417 2021 1729 570 129 0 0 chr5 24161073 24161166 -175468984 + AluS SINE Alu 220 312 0 290 313 196 33 chr5 24162540 24163020 -175467130 + L2 LINE L2 2361 2918 -396 270 250 0 0 chr5 24163134 24163194 -175466956 + L2 LINE L2 2994 3053 -219 1391 181 0 45 chr5 24165371 24165636 -175464514 + AluJo SINE Alu 42 294 -18 193 244 101 76 chr5 24169795 24169914 -175460236 + MIR SINE MIR 20 141 -67 2113 114 0 26 chr5 24170213 24170521 -175459629 - AluSx SINE Alu -12 300 1 2149 145 3 0 chr5 24170521 24170830 -175459320 - AluJo SINE Alu -1 311 1 880 146 139 6 chr5 24173346 24173511 -175456639 + MER5A DNA MER1_type 1 187 -2 745 235 40 32 chr5 24173524 24173771 -175456379 - LTR16A1 LTR ERVL 0 457 209 280 314 67 36 chr5 24174140 24174197 -175455953 + L1MEc LINE L1 1253 1307 -4908 2239 81 10 17 chr5 24174197 24174492 -175455658 + AluSq SINE Alu 2 294 -19 280 314 67 36 chr5 24174492 24174931 -175455219 + L1MEc LINE L1 1307 1654 -4561 571 214 26 0 chr5 24175246 24175363 -175454787 - LTR12 LTR ERV1 -234 480 361 237 264 0 0 chr5 24175366 24175438 -175454712 - LTR30 LTR ERV1 -99 623 552 1456 86 3 162 chr5 24175438 24175777 -175454373 - LTR12 LTR ERV1 -429 285 1 389 288 73 77 chr5 24175882 24176432 -175453718 + L1MEc LINE L1 2184 2732 -3483 2130 81 7 45 chr5 24176432 24176741 -175453409 + AluSg SINE Alu 1 297 -13 389 288 73 77 chr5 24176741 24176979 -175453171 + L1MEc LINE L1 2732 2969 -3246 1163 264 96 52 chr5 24177036 24177984 -175452166 + L1MB8 LINE L1 5193 6172 -6 192 40 0 0 chr5 24178633 24178658 -175451492 + (A)n Simple_repeat Simple_repeat 1 25 0 1559 197 4 4 chr5 24178802 24179081 -175451069 + AluJo SINE Alu 1 279 -33 2278 89 0 13 chr5 24179251 24179553 -175450597 - AluY SINE Alu -13 298 1 2019 119 0 7 chr5 24179803 24180096 -175450054 + AluY SINE Alu 5 295 -16 243 320 25 0 chr5 24180275 24180397 -175449753 - LTR67 LTR ERVL -2 555 431 1365 174 20 39 chr5 24180633 24181023 -175449127 + pTR5 LTR ERV1 743 1125 -1313 2139 128 0 0 chr5 24181277 24181582 -175448568 + AluSx SINE Alu 1 305 -7 196 304 43 0 chr5 24181741 24181810 -175448340 - L2 LINE L2 -1237 2077 2006 943 227 22 40 chr5 24181845 24182122 -175448028 - MLT1A1 LTR MaLR -93 272 1 350 203 130 7 chr5 24182188 24182326 -175447824 - L1MC4 LINE L1 -874 7168 7014 274 192 14 14 chr5 24182339 24182412 -175447738 + (TA)n Simple_repeat Simple_repeat 1 73 0 304 255 64 0 chr5 24182433 24182527 -175447623 + L1MC4 LINE L1 6615 6714 -1328 652 242 32 44 chr5 24182548 24182823 -175447327 - MLT1B LTR MaLR 0 390 123 330 98 0 0 chr5 24184351 24184402 -175445748 + (TATG)n Simple_repeat Simple_repeat 2 52 0 2115 125 0 3 chr5 24184402 24184687 -175445463 - AluSx SINE Alu -26 286 1 642 283 76 39 chr5 24184797 24185335 -175444815 - L1MCa LINE L1 -2410 4016 3459 430 263 62 70 chr5 24185367 24185610 -175444540 - L1MCa LINE L1 -3149 3277 3037 35 40 0 40 chr5 24185971 24186046 -175444104 + AT_rich Low_complexity Low_complexity 1 72 0 652 159 38 0 chr5 24186061 24186193 -175443957 - L1MC1 LINE L1 -452 5881 5745 1949 169 38 19 chr5 24186193 24186611 -175443539 - MSTB1 LTR MaLR 0 419 7 1381 207 28 3 chr5 24186619 24186909 -175443241 - L1MC1 LINE L1 -605 5728 5432 1848 213 42 29 chr5 24186924 24187402 -175442748 - L1MCa LINE L1 -5628 798 315 441 231 10 0 chr5 24187458 24187562 -175442588 + L1MCa LINE L1 506 610 -5816 * 1000 235 63 4 chr5 24187560 24187828 -175442322 - L1MCa LINE L1 -6112 314 31 27 62 0 0 chr5 24188239 24188287 -175441863 + AT_rich Low_complexity Low_complexity 1 48 0 208 227 27 13 chr5 24188443 24188518 -175441632 + (TA)n Simple_repeat Simple_repeat 2 77 0 2329 93 3 3 chr5 24189502 24189813 -175440337 + AluY SINE Alu 1 311 0 985 288 21 37 chr5 24190149 24190528 -175439622 + MLT1D LTR MaLR 22 394 -111 389 279 60 34 chr5 24190709 24190978 -175439172 + HAL1b LINE L1 212 487 -861 2136 90 0 31 chr5 24191322 24191640 -175438510 - AluY SINE Alu 0 309 1 905 97 35 7 chr5 24191662 24191806 -175438344 + THE1B LTR MaLR 2 149 -215 10935 113 11 5 chr5 24191826 24193396 -175436754 + THE1B-int LTR MaLR 1 1580 0 2019 141 19 50 chr5 24193396 24193772 -175436378 + THE1B LTR MaLR 1 364 0 33 0 0 0 chr5 24195586 24195619 -175434531 + AT_rich Low_complexity Low_complexity 1 33 0 243 0 0 0 chr5 24196026 24196053 -175434097 + (T)n Simple_repeat Simple_repeat 1 27 0 23 54 0 0 chr5 24196392 24196429 -175433721 + AT_rich Low_complexity Low_complexity 1 37 0 2576 98 35 8 chr5 24196494 24196892 -175433258 + MLT2A1 LTR ERVL 1 409 -35 324 236 0 0 chr5 24196892 24196981 -175433169 + (TA)n Simple_repeat Simple_repeat 1 89 0 7409 87 35 13 chr5 24196997 24198127 -175432023 + HERVL-A1 LTR ERVL 1 1155 -4499 * 15024 81 2 11 chr5 24198124 24200207 -175429943 + HERVL LTR ERVL 2557 4619 -1035 4951 115 7 63 chr5 24200207 24201154 -175428996 - L1P LINE L1 -2018 4128 3235 1897 177 0 0 chr5 24201298 24201598 -175428552 - AluSx SINE Alu -12 300 1 806 196 43 149 chr5 24202733 24203101 -175427049 + MLT1A2 LTR MaLR 4 332 -42 23 0 0 0 chr5 24204151 24204174 -175425976 + AT_rich Low_complexity Low_complexity 1 23 0 194 299 77 80 chr5 24204550 24204824 -175425326 - L2 LINE L2 -13 3300 3028 688 330 44 39 chr5 24204837 24205173 -175424977 + L2 LINE L2 859 1199 -2115 432 0 0 0 chr5 24205173 24205221 -175424929 + (CA)n Simple_repeat Simple_repeat 2 49 0 688 330 44 39 chr5 24205221 24205272 -175424878 + L2 LINE L2 1199 1248 -2066 752 239 0 30 chr5 24205717 24205884 -175424266 - FRAM SINE Alu -14 162 1 23 0 0 0 chr5 24205895 24205918 -175424232 + AT_rich Low_complexity Low_complexity 1 23 0 435 298 107 17 chr5 24206936 24207114 -175423036 + MIR SINE MIR 1 194 -68 602 107 0 115 chr5 24207842 24207964 -175422186 + MER50 LTR ERV1 497 604 -130 1606 236 37 8 chr5 24208020 24208401 -175421749 + L1M1 LINE L1 14 405 -7160 439 302 38 13 chr5 24208461 24208620 -175421530 + LTR33 LTR ERVL 298 460 -61 46 33 0 0 chr5 24208688 24208748 -175421402 + AT_rich Low_complexity Low_complexity 1 60 0 386 343 42 7 chr5 24210883 24211026 -175419124 + MIR SINE MIR 36 183 -79 1960 203 8 6 chr5 24212249 24212613 -175417537 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr5 24213716 24213738 -175416412 + AT_rich Low_complexity Low_complexity 1 22 0 203 103 26 26 chr5 24214447 24214486 -175415664 + (CA)n Simple_repeat Simple_repeat 2 40 0 1884 189 20 23 chr5 24214840 24215231 -175414919 + MLT1B LTR MaLR 1 390 0 2349 161 11 39 chr5 24215387 24215827 -175414323 + MSTC LTR MaLR 1 428 0 1883 238 92 23 chr5 24215963 24216493 -175413657 + MER77 LTR ERV1 35 601 -4 189 74 0 0 chr5 24216655 24216682 -175413468 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1275 196 42 42 chr5 24216684 24216845 -175413305 - AluJb SINE Alu -31 281 118 213 39 0 0 chr5 24216845 24216871 -175413279 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1275 196 42 42 chr5 24216871 24216974 -175413176 - AluJb SINE Alu -193 119 17 287 253 55 22 chr5 24217006 24217097 -175413053 - MLT1D LTR MaLR -310 195 102 4562 137 53 45 chr5 24217098 24217311 -175412839 - Tigger3b DNA MER2_type -1797 1231 1021 2035 146 3 3 chr5 24217311 24217620 -175412530 - AluSx SINE Alu -3 309 1 4562 137 53 45 chr5 24217620 24218328 -175411822 - Tigger3b DNA MER2_type -2007 1021 302 363 157 0 71 chr5 24218341 24218411 -175411739 - Tigger3b DNA MER2_type -1129 102 38 267 192 164 0 chr5 24218432 24218505 -175411645 - MLT1D LTR MaLR -409 96 12 22 35 0 0 chr5 24218774 24218803 -175411347 + AT_rich Low_complexity Low_complexity 1 29 0 3692 96 15 4 chr5 24218803 24219336 -175410814 - L1MA1 LINE L1 -4 6298 5760 2287 149 3 14 chr5 24220543 24220911 -175409239 - THE1B LTR MaLR 0 364 1 311 281 31 10 chr5 24220930 24221026 -175409124 - MLT2E LTR ERVL -81 547 450 655 239 0 0 chr5 24221136 24221274 -175408876 - ERVL-C1 LTR ERVL -4051 1713 1576 3977 119 10 15 chr5 24221318 24221546 -175408604 - LTR43 LTR ERV1 -2 600 372 2395 140 3 3 chr5 24221546 24221910 -175408240 - THE1B LTR MaLR 0 364 1 3977 119 10 15 chr5 24221910 24222284 -175407866 - LTR43 LTR ERV1 -230 372 1 1138 309 34 2 chr5 24222285 24222693 -175407457 - ERVL-C1 LTR ERVL -4243 1521 1101 10100 237 55 58 chr5 24222702 24227905 -175402245 + L1PA12 LINE L1 5 5193 -2391 7324 203 19 33 chr5 24228025 24229758 -175400392 + L1P LINE L1 3169 4877 -1269 912 177 14 14 chr5 24229859 24230074 -175400076 + L1P LINE L1 5181 5395 -751 789 270 72 4 chr5 24230113 24230376 -175399774 - ERVL-C1 LTR ERVL -4667 1097 817 822 345 29 11 chr5 24230395 24230746 -175399404 - ERVL-C1 LTR ERVL -5062 702 346 1019 251 45 57 chr5 24230801 24231155 -175398995 + MLT1B LTR MaLR 41 390 0 317 325 0 17 chr5 24231310 24231427 -175398723 - ERVL-C1 LTR ERVL -5647 117 3 949 276 22 60 chr5 24231428 24231841 -175398309 - MLT2C1 LTR ERVL 0 397 1 22 0 0 0 chr5 24231906 24231928 -175398222 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 24232042 24232065 -175398085 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr5 24233049 24233097 -175397053 + AT_rich Low_complexity Low_complexity 1 48 0 235 221 0 19 chr5 24233607 24233711 -175396439 + CT-rich Low_complexity Low_complexity 3 104 0 223 287 59 40 chr5 24233975 24234076 -175396074 + L2 LINE L2 3200 3302 -11 28 29 0 0 chr5 24234182 24234217 -175395933 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr5 24234522 24234552 -175395598 + AT_rich Low_complexity Low_complexity 1 30 0 1669 116 3 104 chr5 24234881 24235226 -175394924 - L1PB1 LINE L1 -6 6145 5836 4364 185 45 54 chr5 24235307 24236537 -175393613 + L1MA10 LINE L1 5103 6330 -4 213 316 13 26 chr5 24237414 24237490 -175392660 - L2 LINE L2 0 3272 3198 4401 128 28 5 chr5 24237996 24238748 -175391402 + L1MA4A LINE L1 5535 6303 0 29 0 0 0 chr5 24238813 24238842 -175391308 + AT_rich Low_complexity Low_complexity 1 29 0 8034 157 122 23 chr5 24238842 24240318 -175389832 + Tigger1 DNA MER2_type 582 2245 -173 1507 176 6 73 chr5 24240318 24240648 -175389502 - AluJb SINE Alu -3 309 2 8034 157 122 23 chr5 24240648 24240841 -175389309 + Tigger1 DNA MER2_type 2245 2417 -1 29 0 0 0 chr5 24242250 24242279 -175387871 + AT_rich Low_complexity Low_complexity 1 29 0 305 238 0 0 chr5 24242407 24242487 -175387663 + MIR SINE MIR 183 262 0 21 0 0 0 chr5 24242728 24242749 -175387401 + AT_rich Low_complexity Low_complexity 1 21 0 197 354 163 26 chr5 24243892 24244358 -175385792 + L2 LINE L2 2092 2621 -693 22 70 0 0 chr5 24244432 24244475 -175385675 + AT_rich Low_complexity Low_complexity 1 43 0 4820 187 27 24 chr5 24244486 24245890 -175384260 - L1PA16 LINE L1 -3 6163 4763 1260 236 21 41 chr5 24245890 24246229 -175383921 - L1PA16 LINE L1 -2035 4111 3780 18642 103 7 1 chr5 24246229 24249771 -175380379 - L1PA7 LINE L1 -2 6152 2606 3747 109 0 28 chr5 24249772 24250351 -175379799 + L1PA7 LINE L1 2046 2608 -3538 3663 261 28 37 chr5 24250350 24251501 -175378649 - L1PA16 LINE L1 -2636 3510 2405 * 2023 152 0 0 chr5 24251501 24251798 -175378352 + AluSx SINE Alu 1 297 -15 3663 261 28 37 chr5 24251798 24252223 -175377927 - L1PA16 LINE L1 -3741 2405 1978 210 37 0 0 chr5 24252672 24252699 -175377451 + (CA)n Simple_repeat Simple_repeat 2 28 0 226 229 66 0 chr5 24253100 24253161 -175376989 + MLT1H LTR MaLR 479 543 -6 29 28 0 0 chr5 24253652 24253688 -175376462 + AT_rich Low_complexity Low_complexity 1 36 0 417 259 6 82 chr5 24254196 24254366 -175375784 - LTR16A LTR ERVL -259 191 35 23 68 0 0 chr5 24254400 24254444 -175375706 + AT_rich Low_complexity Low_complexity 1 44 0 21 71 0 0 chr5 24254829 24254871 -175375279 + AT_rich Low_complexity Low_complexity 1 42 0 318 300 14 36 chr5 24254872 24255012 -175375138 + HsTC2 DNA Tc2 1277 1589 -309 256 269 32 21 chr5 24255024 24255117 -175375033 + HsTC2 DNA Tc2 1800 1893 -5 1581 184 3 14 chr5 24255259 24255542 -175374608 + AluJb SINE Alu 11 290 -22 336 127 0 0 chr5 24255920 24255975 -175374175 + (CA)n Simple_repeat Simple_repeat 1 55 0 893 117 61 104 chr5 24255977 24256026 -175374124 + HSMAR2 DNA Mariner 3 53 -1249 1886 120 29 11 chr5 24256026 24256331 -175373819 + AluSc SINE Alu 1 310 0 893 117 61 104 chr5 24256331 24256390 -175373760 + HSMAR2 DNA Mariner 53 113 -1189 2109 75 0 0 chr5 24256390 24256657 -175373493 - AluY SINE Alu -5 306 40 893 117 61 104 chr5 24256657 24256776 -175373374 + HSMAR2 DNA Mariner 113 222 -1080 1649 189 3 66 chr5 24256776 24257142 -175373008 + MER61A LTR ERV1 1 343 0 2435 185 17 62 chr5 24257142 24257705 -175372445 + MER61A-int LTR ERV1 1 537 -4680 1229 227 125 10 chr5 24257705 24258106 -175372044 + LTR2 LTR ERV1 3 449 0 2435 185 17 62 chr5 24258106 24258136 -175372014 + MER61A-int LTR ERV1 537 567 -4650 * 12972 93 26 13 chr5 24258111 24260039 -175370111 + MER61-int LTR ERV1 1391 3343 -1874 275 178 0 0 chr5 24260039 24260084 -175370066 + Alu SINE Alu 1 45 -257 * 339 233 22 0 chr5 24260072 24260162 -175369988 + HSMAR2 DNA Mariner 1209 1300 -2 376 347 12 12 chr5 24260493 24260583 -175369567 + CT-rich Low_complexity Low_complexity 3 95 -74 2373 64 0 0 chr5 24260583 24260878 -175369272 - AluY SINE Alu -16 295 1 376 347 12 12 chr5 24260878 24260954 -175369196 + CT-rich Low_complexity Low_complexity 94 169 0 24 53 0 0 chr5 24261017 24261055 -175369095 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 24261181 24261211 -175368939 + AT_rich Low_complexity Low_complexity 1 30 0 413 229 21 0 chr5 24261448 24261544 -175368606 + AluJ/FLAM SINE Alu 2 99 -213 4208 200 27 17 chr5 24261550 24262646 -175367504 - L1P4 LINE L1 -479 5687 4578 1687 151 76 25 chr5 24262646 24263003 -175367147 + THE1C LTR MaLR 1 375 0 4208 200 27 17 chr5 24263003 24263314 -175366836 - L1P4 LINE L1 -1588 4578 4271 332 221 15 15 chr5 24263986 24264122 -175366028 + (TA)n Simple_repeat Simple_repeat 2 137 0 21 57 0 0 chr5 24264534 24264569 -175365581 + AT_rich Low_complexity Low_complexity 1 35 0 696 150 7 52 chr5 24264694 24264847 -175365303 - L1MA10 LINE L1 -11 6323 6178 1379 196 7 42 chr5 24264847 24265249 -175364901 + L1P LINE L1 4864 5231 -915 * 1978 208 5 5 chr5 24265246 24265645 -175364505 + L1PB4 LINE L1 4519 4917 -1229 634 157 39 39 chr5 24265655 24265808 -175364342 + L1MA5 LINE L1 6143 6295 -5 369 0 0 0 chr5 24266165 24266206 -175363944 + (TG)n Simple_repeat Simple_repeat 2 42 0 255 103 0 0 chr5 24266277 24266316 -175363834 + (CA)n Simple_repeat Simple_repeat 2 40 0 696 257 34 63 chr5 24266754 24266991 -175363159 - MSTD LTR MaLR -7 389 160 1576 179 7 23 chr5 24267084 24267385 -175362765 + AluJo SINE Alu 5 300 -12 1819 178 3 13 chr5 24267467 24267776 -175362374 + AluSx SINE Alu 3 308 -4 465 269 25 0 chr5 24267831 24267950 -175362200 + MIR SINE MIR 34 155 -107 204 40 0 0 chr5 24271360 24271385 -175358765 + (A)n Simple_repeat Simple_repeat 1 25 0 25 51 0 0 chr5 24271631 24271670 -175358480 + AT_rich Low_complexity Low_complexity 1 39 0 294 132 0 0 chr5 24271888 24271941 -175358209 + (TG)n Simple_repeat Simple_repeat 1 53 0 2679 186 8 2 chr5 24271946 24272429 -175357721 + THE1C-int LTR MaLR 1042 1527 -124 196 50 0 50 chr5 24272433 24272473 -175357677 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 3881 186 17 13 chr5 24272701 24273479 -175356671 + L1PB4 LINE L1 5362 6142 -14 2094 113 3 13 chr5 24273577 24273887 -175356263 - AluSx SINE Alu -5 307 1 3882 213 28 44 chr5 24274213 24274462 -175355688 + L1MA9 LINE L1 4215 4467 -1845 1613 143 42 65 chr5 24274462 24274626 -175355524 + THE1C LTR MaLR 1 167 -208 2539 27 3 0 chr5 24274626 24274921 -175355229 - AluY SINE Alu -15 296 1 1613 143 42 65 chr5 24274921 24275140 -175355010 + THE1C LTR MaLR 167 375 0 3882 213 28 44 chr5 24275140 24275301 -175354849 + L1MA9 LINE L1 4467 4629 -1683 1981 132 7 3 chr5 24275301 24275597 -175354553 - AluSx SINE Alu -15 297 1 3882 213 28 44 chr5 24275597 24277284 -175352866 + L1MA9 LINE L1 4629 6274 -38 23 33 0 0 chr5 24277366 24277396 -175352754 + AT_rich Low_complexity Low_complexity 1 30 0 936 142 65 0 chr5 24277628 24277783 -175352367 - AluSg/x SINE Alu -14 298 134 996 214 14 5 chr5 24278353 24280206 -175349944 + ALR/Alpha Satellite centromeric 1 1836 -4839 2430 72 3 0 chr5 24280206 24280510 -175349640 - AluY SINE Alu -6 305 1 996 214 14 5 chr5 24280510 24284944 -175345206 + ALR/Alpha Satellite centromeric 1836 6648 -27 6200 79 5 3 chr5 24284944 24286378 -175343772 - L1PA7 LINE L1 -110 6044 4606 885 218 5 4 chr5 24286379 24287191 -175342959 + ALR/Alpha Satellite centromeric 1 813 0 878 219 9 1 chr5 24287208 24288557 -175341593 + ALR/Alpha Satellite centromeric 1 1359 0 925 222 8 4 chr5 24288569 24292224 -175337926 + ALR/Alpha Satellite centromeric 1 3668 -1 827 232 4 2 chr5 24292239 24294480 -175335670 + ALR/Alpha Satellite centromeric 1 2246 -57 208 176 0 59 chr5 24294480 24294548 -175335602 + (TA)n Simple_repeat Simple_repeat 2 65 0 908 203 7 3 chr5 24294559 24298496 -175331654 + ALR/Alpha Satellite centromeric 1 3949 -42 481 241 8 72 chr5 24298497 24298733 -175331417 + L1MA9 LINE L1 6052 6272 -40 1481 101 0 5 chr5 24300959 24301157 -175328993 + AluSq SINE Alu 102 298 -15 40 83 0 0 chr5 24301632 24301728 -175328422 + AT_rich Low_complexity Low_complexity 1 96 0 28 0 0 0 chr5 24301811 24301839 -175328311 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 24302316 24302339 -175327811 + AT_rich Low_complexity Low_complexity 1 23 0 2393 4 83 0 chr5 24303226 24303504 -175326646 + AluY SINE Alu 1 301 -10 22 0 0 0 chr5 24303946 24303968 -175326182 + AT_rich Low_complexity Low_complexity 1 22 0 3660 65 6 68 chr5 24304344 24304885 -175325265 + L1PA7 LINE L1 5636 6142 -12 718 195 0 0 chr5 24304919 24305042 -175325108 + Tigger1 DNA MER2_type 14 136 -2282 1046 179 24 0 chr5 24305044 24305251 -175324899 + Tigger1 DNA MER2_type 2203 2414 -4 1779 93 8 31 chr5 24305381 24305638 -175324512 + AluY SINE Alu 52 302 -9 21 82 0 0 chr5 24305938 24305987 -175324163 + AT_rich Low_complexity Low_complexity 1 49 0 1981 173 26 0 chr5 24306574 24306926 -175323224 - THE1B LTR MaLR -3 361 1 3445 232 14 11 chr5 24308429 24309290 -175320860 + L1 LINE L1 4056 4919 -1227 * 12976 32 1 2 chr5 24309270 24311179 -175318971 - L1PA4 LINE L1 -433 5722 3818 3559 36 32 0 chr5 24311157 24311599 -175318551 + L1PA4 LINE L1 5692 6147 -8 * 2216 227 98 73 chr5 24311617 24312333 -175317817 + L1PA15 LINE L1 4906 5763 -402 637 118 29 0 chr5 24312333 24312435 -175317715 + THE1C LTR MaLR 270 374 -1 2216 227 98 73 chr5 24312435 24312844 -175317306 + L1PA15 LINE L1 5763 6160 -5 775 152 41 7 chr5 24312857 24313002 -175317148 - L1M2 LINE L1 -719 5593 5444 1469 224 102 100 chr5 24313648 24313843 -175316307 - L1ME1 LINE L1 -11 6155 5962 2199 124 0 10 chr5 24313843 24314157 -175315993 - AluSq SINE Alu 0 313 3 1469 224 102 100 chr5 24314157 24314851 -175315299 - L1ME1 LINE L1 -204 5962 5285 652 283 48 53 chr5 24314872 24315307 -175314843 - L1ME1 LINE L1 -923 5223 4791 29 47 0 0 chr5 24315903 24315946 -175314204 + AT_rich Low_complexity Low_complexity 1 43 0 2048 159 11 11 chr5 24316673 24317051 -175313099 - MER65A LTR ERV1 -28 417 40 2623 99 3 0 chr5 24317122 24317476 -175312674 - THE1A LTR MaLR 0 355 1 9898 109 73 0 chr5 24317476 24318948 -175311202 - THE1A-int LTR MaLR 0 1580 1 2530 104 6 3 chr5 24318948 24319302 -175310848 - THE1A LTR MaLR 0 355 1 1930 155 0 0 chr5 24319312 24319602 -175310548 - AluSx SINE Alu -22 290 1 1072 149 0 23 chr5 24319612 24319786 -175310364 - AluSg/x SINE Alu -14 296 127 4625 62 3 2 chr5 24319806 24320446 -175309704 - L1PA7 LINE L1 0 6154 5551 227 197 45 15 chr5 24320572 24320638 -175309512 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 23 68 0 0 chr5 24321102 24321146 -175309004 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 24321556 24321582 -175308568 + AT_rich Low_complexity Low_complexity 1 26 0 360 43 0 0 chr5 24321874 24321920 -175308230 + (TA)n Simple_repeat Simple_repeat 1 46 0 324 0 0 0 chr5 24322092 24322128 -175308022 + (GA)n Simple_repeat Simple_repeat 1 36 0 553 205 0 33 chr5 24322849 24322971 -175307179 + FLAM_C SINE Alu 1 118 -25 1096 171 40 6 chr5 24322971 24323290 -175306860 - MSTA LTR MaLR -4 424 1 216 67 0 0 chr5 24323300 24323330 -175306820 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 266 300 13 1 chr5 24323429 24323511 -175306639 - MER5A DNA MER1_type -79 102 22 301 152 0 0 chr5 24323683 24323729 -175306421 - MER57A LTR ERV1 -181 222 177 423 0 0 0 chr5 24323987 24324034 -175306116 + (TC)n Simple_repeat Simple_repeat 1 47 0 27 49 0 0 chr5 24324518 24324559 -175305591 + AT_rich Low_complexity Low_complexity 1 41 0 222 20 20 82 chr5 24324970 24325019 -175305131 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 922 192 100 78 chr5 24325094 24325375 -175304775 + AluJb SINE Alu 1 287 -15 2150 94 40 12 chr5 24325645 24325974 -175304176 + L1PA13 LINE L1 5817 6154 -9 264 270 0 0 chr5 24326006 24326080 -175304070 + MER104 DNA Tc2 36 109 -71 235 173 19 19 chr5 24326191 24326243 -175303907 + GA-rich Low_complexity Low_complexity 2 53 0 1262 109 6 0 chr5 24326337 24326511 -175303639 + AluSc SINE Alu 46 220 -89 21 36 0 0 chr5 24326663 24326691 -175303459 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 24326698 24326726 -175303424 + AT_rich Low_complexity Low_complexity 1 28 0 417 224 24 0 chr5 24327099 24327184 -175302966 + Tigger5 DNA MER2_type 2237 2323 0 1582 267 55 70 chr5 24327184 24328616 -175301534 - L1M4 LINE L1 -530 5644 4240 299 171 48 6 chr5 24328619 24328732 -175301418 - L1M4 LINE L1 -2169 3977 3867 448 264 137 22 chr5 24328838 24329334 -175300816 - L1M4 LINE L1 -2472 3674 3122 * 1008 234 58 24 chr5 24329326 24329655 -175300495 - L1MC3 LINE L1 -1607 6596 6257 7185 265 38 42 chr5 24329673 24331593 -175298557 - L1MA3 LINE L1 -2 6303 4376 826 203 0 25 chr5 24331593 24331756 -175298394 - FRAM SINE Alu -17 159 1 7185 265 38 42 chr5 24331756 24333856 -175296294 - L1MA3 LINE L1 -1929 4376 2215 1489 239 119 35 chr5 24333869 24334528 -175295622 - L1MC3 LINE L1 -825 5739 5137 2444 119 6 0 chr5 24334528 24334881 -175295269 - THE1A LTR MaLR 0 355 1 10772 116 7 4 chr5 24334881 24336456 -175293694 - THE1A-int LTR MaLR 0 1580 1 2487 126 0 3 chr5 24336456 24336812 -175293338 - THE1A LTR MaLR 0 355 1 1489 239 119 35 chr5 24336812 24337013 -175293137 - L1MC3 LINE L1 -1062 5502 5319 1521 269 86 29 chr5 24337015 24337874 -175292276 - L1MC3 LINE L1 -1380 5184 4277 682 149 0 33 chr5 24337880 24338001 -175292149 + Tigger3(Golem) DNA MER2_type 2646 2762 -267 401 230 42 24 chr5 24338015 24338180 -175291970 + L1M4 LINE L1 2944 3111 -3035 869 254 46 23 chr5 24338180 24338440 -175291710 - Tigger3(Golem) DNA MER2_type -1 3028 2763 6812 158 36 9 chr5 24338446 24339709 -175290441 + HSMAR2 DNA Mariner 4 1301 -1 1139 265 106 15 chr5 24339729 24340752 -175289398 - L1MC3 LINE L1 -3241 3323 2206 1064 281 45 36 chr5 24340749 24341568 -175288582 - L1MC3 LINE L1 -4852 1193 572 * 283 254 0 16 chr5 24341673 24341736 -175288414 - L1MC3 LINE L1 -5485 560 499 416 233 0 9 chr5 24341813 24341929 -175288221 + CT-rich Low_complexity Low_complexity 3 117 0 1770 142 9 41 chr5 24341936 24342253 -175287897 + AluSx SINE Alu 1 307 -5 236 319 0 14 chr5 24342257 24342326 -175287824 - L1MC3 LINE L1 -6357 207 140 27 62 0 0 chr5 24343215 24343263 -175286887 + AT_rich Low_complexity Low_complexity 1 48 0 21 0 0 0 chr5 24343350 24343371 -175286779 + AT_rich Low_complexity Low_complexity 1 21 0 31 44 0 0 chr5 24343521 24343566 -175286584 + AT_rich Low_complexity Low_complexity 1 45 0 4670 133 58 33 chr5 24343582 24344678 -175285472 + pTR5 LTR ERV1 741 2024 -414 374 194 31 20 chr5 24344679 24344777 -175285373 + LTR30 LTR ERV1 544 642 -80 1479 86 14 14 chr5 24344780 24345001 -175285149 + pTR5 LTR ERV1 172 392 -2046 15796 206 30 22 chr5 24345001 24346129 -175284021 - L1P4 LINE L1 -713 5448 4331 2548 45 0 3 chr5 24346129 24346441 -175283709 - AluY SINE Alu 0 311 1 15796 206 30 22 chr5 24346441 24349191 -175280959 - L1P4 LINE L1 -1830 4331 1542 1590 188 0 4 chr5 24349713 24349985 -175280165 + AluSx SINE Alu 15 285 -27 240 287 72 62 chr5 24350274 24350483 -175279667 + L1ME LINE L1 5555 5765 -399 25 31 0 0 chr5 24350623 24350655 -175279495 + AT_rich Low_complexity Low_complexity 1 32 0 10980 151 25 1 chr5 24350688 24352167 -175277983 + L1PA10 LINE L1 3394 4929 -1239 1810 153 41 49 chr5 24352167 24352534 -175277616 - THE1B LTR MaLR 0 364 1 10980 151 25 1 chr5 24352534 24353804 -175276346 + L1PA10 LINE L1 4929 6168 0 28 29 0 0 chr5 24354044 24354079 -175276071 + AT_rich Low_complexity Low_complexity 1 35 0 366 464 106 17 chr5 24354189 24354670 -175275480 - L1MC4a LINE L1 -1772 6036 5513 917 215 138 0 chr5 24354978 24355224 -175274926 + AluJo SINE Alu 1 280 -32 201 74 0 0 chr5 24355227 24355254 -175274896 + (TAA)n Simple_repeat Simple_repeat 2 28 0 215 162 27 54 chr5 24355347 24355421 -175274729 + T-rich Low_complexity Low_complexity 5 76 0 512 383 66 27 chr5 24355606 24356016 -175274134 + L1ME2 LINE L1 39 464 -5932 702 295 84 37 chr5 24356214 24356268 -175273882 + L1ME2 LINE L1 2926 2976 -3239 2033 162 20 11 chr5 24356268 24356626 -175273524 - THE1B LTR MaLR -3 361 1 702 295 84 37 chr5 24356626 24357059 -175273091 + L1ME2 LINE L1 2976 3452 -2763 1249 267 37 66 chr5 24357079 24357458 -175272692 + L1ME2 LINE L1 3969 4358 -1857 2152 136 37 8 chr5 24357458 24357811 -175272339 - THE1B LTR MaLR 0 364 2 1249 267 37 66 chr5 24357811 24358066 -175272084 + L1ME2 LINE L1 4358 4619 -1596 1924 250 72 27 chr5 24358066 24358689 -175271461 + MLT1E1 LTR MaLR 2 652 -2 1249 267 37 66 chr5 24358689 24359069 -175271081 + L1ME2 LINE L1 4619 4955 -1260 802 251 77 32 chr5 24359148 24359523 -175270627 + L1ME2 LINE L1 4969 5360 -855 1185 310 29 36 chr5 24359547 24360179 -175269971 + L1ME2 LINE L1 5395 6021 -212 1818 138 0 0 chr5 24360194 24360455 -175269695 - AluSq SINE Alu -52 261 1 261 0 0 0 chr5 24360457 24360486 -175269664 + (CA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr5 24360862 24360884 -175269266 + AT_rich Low_complexity Low_complexity 1 22 0 360 195 11 35 chr5 24361244 24361331 -175268819 - L1P LINE L1 -1489 4657 4573 209 353 57 74 chr5 24361725 24362022 -175268128 - L2 LINE L2 0 3313 3022 1198 213 77 81 chr5 24362022 24362491 -175267659 - MLT1C LTR MaLR 0 467 1 209 353 57 74 chr5 24362491 24362559 -175267591 - L2 LINE L2 -291 3022 2954 215 264 19 0 chr5 24362736 24362789 -175267361 - L2 LINE L2 -365 2907 2854 21 0 0 0 chr5 24363132 24363153 -175266997 + AT_rich Low_complexity Low_complexity 1 21 0 496 269 70 26 chr5 24363324 24363551 -175266599 - L1ME LINE L1 -511 6464 6228 181 0 69 0 chr5 24363642 24363671 -175266479 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1237 187 52 42 chr5 24364304 24364593 -175265557 - AluJo SINE Alu -10 292 1 2321 86 0 6 chr5 24364926 24365239 -175264911 + AluY SINE Alu 1 311 0 1052 209 48 101 chr5 24365329 24365706 -175264444 - MLT1A2 LTR MaLR -16 358 2 518 212 58 48 chr5 24365924 24366113 -175264037 - L1MB7 LINE L1 0 6184 5994 3034 296 59 56 chr5 24366121 24368214 -175261936 - L1MEc LINE L1 -2405 4552 2482 831 320 94 22 chr5 24368405 24369043 -175261107 - L1MEc LINE L1 -4571 2388 1705 1371 304 31 52 chr5 24369101 24369643 -175260507 - L1MEc LINE L1 -6318 541 11 2102 226 22 10 chr5 24369643 24370142 -175260008 + LTR10B LTR ERV1 1 505 0 3228 183 16 11 chr5 24370142 24370770 -175259380 + LTR10B-int LTR ERV1 5 635 -6014 1672 159 21 3 chr5 24370770 24371110 -175259040 - L1PBa LINE L1 -4827 2036 1691 * 3019 209 1 9 chr5 24371106 24371757 -175258393 + L1 LINE L1 2150 2795 -3351 3875 184 16 6 chr5 24371763 24372470 -175257680 + MER50 LTR ERV1 1 714 -20 1664 258 18 2 chr5 24372513 24373010 -175257140 + L1 LINE L1 2794 3298 -2848 1446 121 52 20 chr5 24373545 24373794 -175256356 + L1PA11 LINE L1 5918 6174 0 2141 96 0 0 chr5 24373938 24374249 -175255901 + AluSg SINE Alu 1 311 0 1160 236 143 11 chr5 24374748 24375071 -175255079 + MLT2D LTR ERVL 1 379 -35 417 86 0 0 chr5 24375071 24375129 -175255021 + (CA)n Simple_repeat Simple_repeat 1 58 0 1160 236 143 11 chr5 24375129 24375170 -175254980 + MLT2D LTR ERVL 379 413 -1 419 254 58 10 chr5 24375341 24375513 -175254637 + MER92B LTR ERV1 257 412 0 548 220 167 12 chr5 24376294 24376506 -175253644 - L1MA8 LINE L1 -40 6272 6036 248 396 90 4 chr5 24377507 24377752 -175252398 + L1MEc LINE L1 179 444 -5952 1505 147 4 11 chr5 24378020 24378316 -175251834 + L1MA7 LINE L1 6013 6306 0 1034 253 104 15 chr5 24378534 24379005 -175251145 - L1M4c LINE L1 -2581 4063 3551 * 1970 284 42 33 chr5 24378980 24380292 -175249858 - L1M4c LINE L1 -4053 2772 1296 622 161 65 8 chr5 24380336 24380460 -175249690 + MLT1B LTR MaLR 1 131 -259 1021 237 11 38 chr5 24380558 24380824 -175249326 + MLT1B LTR MaLR 132 390 0 905 251 89 20 chr5 24380825 24380872 -175249278 - L1M4c LINE L1 -5282 1260 1218 1487 196 14 11 chr5 24380872 24381254 -175248896 - AluJb SINE Alu 0 388 6 905 251 89 20 chr5 24381254 24381494 -175248656 - L1M4c LINE L1 -5324 1218 942 3594 104 22 4 chr5 24381494 24382041 -175248109 - L1PA13 LINE L1 0 6163 5607 905 251 89 20 chr5 24382041 24382098 -175248052 - L1M4c LINE L1 -5600 942 890 967 256 110 66 chr5 24382103 24382541 -175247609 + MLT1D LTR MaLR 49 505 0 1852 268 52 14 chr5 24382541 24383131 -175247019 - L1M4c LINE L1 -5906 636 24 213 39 0 0 chr5 24383791 24383817 -175246333 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2039 137 3 0 chr5 24384215 24384514 -175245636 - AluSp SINE Alu -13 300 1 1045 249 52 33 chr5 24385547 24385912 -175244238 - MER92A LTR ERV1 -1 411 40 197 315 0 27 chr5 24385939 24386012 -175244138 - MIR SINE MIR -10 252 182 2436 60 0 0 chr5 24386300 24386601 -175243549 + AluY SINE Alu 1 301 -10 291 157 0 0 chr5 24386963 24387014 -175243136 + (TA)n Simple_repeat Simple_repeat 1 51 0 668 131 0 0 chr5 24387027 24387126 -175243024 - HY3 scRNA scRNA -2 99 1 198 0 0 0 chr5 24387650 24387672 -175242478 + (TC)n Simple_repeat Simple_repeat 2 23 0 * 297 0 0 0 chr5 24387671 24387704 -175242446 + (TG)n Simple_repeat Simple_repeat 2 34 0 326 318 47 47 chr5 24387736 24387778 -175242372 + L1ME LINE L1 5498 5539 -582 977 245 32 86 chr5 24387778 24388186 -175241964 - MLT1B LTR MaLR 0 390 5 326 318 47 47 chr5 24388186 24388354 -175241796 + L1ME LINE L1 5538 5708 -413 24 53 0 0 chr5 24388686 24388724 -175241426 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 24388770 24388791 -175241359 + AT_rich Low_complexity Low_complexity 1 21 0 858 289 52 25 chr5 24388982 24389346 -175240804 + MLT1A2 LTR MaLR 1 374 0 2881 137 12 18 chr5 24389831 24390328 -175239822 + MER50 LTR ERV1 1 494 -240 259 222 19 0 chr5 24390324 24390378 -175239772 + MER50 LTR ERV1 657 711 -23 * 639 71 0 0 chr5 24390625 24390710 -175239440 + (TA)n Simple_repeat Simple_repeat 2 86 0 1783 167 3 14 chr5 24390713 24391007 -175239143 - AluSx SINE Alu -21 291 1 1394 228 63 6 chr5 24391186 24391520 -175238630 - MLT1D LTR MaLR 0 505 153 1771 257 65 23 chr5 24391524 24392116 -175238034 - MER92B LTR ERV1 -3 560 1 466 210 68 74 chr5 24392116 24392269 -175237881 - MLT1D LTR MaLR -353 152 1 1904 197 33 20 chr5 24392589 24392980 -175237170 + MSTD LTR MaLR 1 396 0 256 366 80 9 chr5 24393394 24393506 -175236644 + L2 LINE L2 2572 2691 -623 339 232 0 0 chr5 24393513 24393595 -175236555 + (TATATG)n Simple_repeat Simple_repeat 2 83 0 287 175 0 0 chr5 24393600 24393663 -175236487 - L1MC4 LINE L1 -1340 6702 6640 899 238 15 0 chr5 24393663 24393865 -175236285 + MER2 DNA MER2_type 2 206 -139 313 301 0 0 chr5 24393894 24393967 -175236183 + MER2 DNA MER2_type 273 345 0 398 355 153 11 chr5 24394430 24394712 -175235438 + MER77 LTR ERV1 278 599 -6 1527 281 17 12 chr5 24394806 24395223 -175234927 + MER77-int LTR ERV1 13 431 -3760 1858 260 71 61 chr5 24395247 24396669 -175233481 + MER21-int LTR ERV1 1920 2695 -1496 608 267 84 46 chr5 24396678 24396894 -175233256 + MER77 LTR ERV1 407 599 -6 21 0 0 0 chr5 24396979 24397000 -175233150 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 24397635 24397663 -175232487 + AT_rich Low_complexity Low_complexity 1 28 0 535 286 63 11 chr5 24398585 24398760 -175231390 - MIR SINE MIR -24 238 55 1762 153 17 3 chr5 24399344 24399638 -175230512 + AluJb SINE Alu 1 298 -14 261 242 0 0 chr5 24399897 24399914 -175230236 + (TA)n Simple_repeat Simple_repeat 1 17 -49 189 0 0 0 chr5 24399914 24399935 -175230215 + (CA)n Simple_repeat Simple_repeat 2 22 0 261 242 0 0 chr5 24399935 24399983 -175230167 + (TA)n Simple_repeat Simple_repeat 16 66 0 4933 201 22 15 chr5 24399992 24402036 -175228114 - L1PA15 LINE L1 -5 6160 4100 3883 239 13 12 chr5 24402039 24403107 -175227043 + L1 LINE L1 2997 4065 -2081 3430 163 20 14 chr5 24403203 24404123 -175226027 - L1MA3 LINE L1 -2 6303 5225 10464 238 34 9 chr5 24404139 24405518 -175224632 - L1M2 LINE L1 -4391 2458 994 498 17 0 0 chr5 24405518 24405577 -175224573 + (TG)n Simple_repeat Simple_repeat 1 59 0 10464 238 34 9 chr5 24405577 24406590 -175223560 - L1M2 LINE L1 -5855 994 7 504 240 0 0 chr5 24407460 24407639 -175222511 + (TA)n Simple_repeat Simple_repeat 2 180 0 1124 274 36 27 chr5 24407807 24408172 -175221978 + MLT1A2 LTR MaLR 1 368 -6 1750 185 0 3 chr5 24408205 24408502 -175221648 + AluJb SINE Alu 1 296 -16 1480 232 49 0 chr5 24408995 24409323 -175220827 - MER7A DNA MER2_type -1 345 4 210 171 0 0 chr5 24409341 24409382 -175220768 + (CA)n Simple_repeat Simple_repeat 1 41 0 633 262 15 0 chr5 24409638 24409798 -175220352 - MLT1A2 LTR MaLR -39 335 188 31 26 0 0 chr5 24409889 24409927 -175220223 + AT_rich Low_complexity Low_complexity 1 38 0 327 237 102 46 chr5 24409938 24410071 -175220079 - MLT1B LTR MaLR -244 137 1 1543 194 7 26 chr5 24410071 24410375 -175219775 - ERVL-D LTR ERVL -1160 4604 4307 2532 64 0 3 chr5 24410389 24410701 -175219449 + AluY SINE Alu 1 311 0 2562 249 32 16 chr5 24410707 24411874 -175218276 - ERVL-D LTR ERVL -4502 1262 4 1447 251 19 40 chr5 24411876 24411929 -175218221 - MLT2D LTR ERVL 0 414 361 785 253 96 37 chr5 24411929 24412253 -175217897 - MER2 DNA MER2_type -1 343 1 1447 251 19 40 chr5 24412253 24412622 -175217528 - MLT2D LTR ERVL -53 361 1 21 36 0 0 chr5 24412641 24412669 -175217481 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr5 24412736 24412773 -175217377 + AT_rich Low_complexity Low_complexity 1 37 0 414 280 46 74 chr5 24412855 24413223 -175216927 - MLT1H LTR MaLR -33 376 51 341 372 36 0 chr5 24413512 24413708 -175216442 - MIR SINE MIR -15 247 45 21 36 0 0 chr5 24414854 24414882 -175215268 + AT_rich Low_complexity Low_complexity 1 28 0 14690 174 73 29 chr5 24415109 24421148 -175209002 + L1PB1 LINE L1 1 6300 -567 3532 108 13 6 chr5 24421255 24421800 -175208350 + L1PB1 LINE L1 6316 6864 -3 28 0 0 0 chr5 24421800 24421828 -175208322 + AT_rich Low_complexity Low_complexity 1 28 0 4358 181 9 11 chr5 24421868 24423161 -175206989 - L1P5 LINE L1 -491 5660 4364 46 62 0 0 chr5 24423238 24423319 -175206831 + AT_rich Low_complexity Low_complexity 1 81 0 5317 105 112 29 chr5 24423558 24424635 -175205515 + MER11A LTR ERVK 4 1266 0 22 0 0 0 chr5 24424708 24424730 -175205420 + AT_rich Low_complexity Low_complexity 1 22 0 589 127 3 7 chr5 24424881 24424991 -175205159 - L1P LINE L1 -1059 5087 4981 423 0 0 0 chr5 24425030 24425077 -175205073 + (CA)n Simple_repeat Simple_repeat 2 48 0 1786 251 70 35 chr5 24425217 24425790 -175204360 - MLT1E LTR MaLR 0 593 1 29 0 0 0 chr5 24427185 24427214 -175202936 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 24428064 24428090 -175202060 + AT_rich Low_complexity Low_complexity 1 26 0 3733 70 8 2 chr5 24428157 24428660 -175201490 - L1P3 LINE L1 -342 5812 5307 2197 79 7 3 chr5 24428660 24428953 -175201197 + L1PA7 LINE L1 5850 6153 -1 8797 77 10 1 chr5 24429910 24431866 -175198284 - L1PA6 LINE L1 -5 6149 4163 4246 74 7 3 chr5 24431867 24432446 -175197704 - L1PA6 LINE L1 -2042 4104 3524 1999 194 51 53 chr5 24432444 24432954 -175197196 - L1MC1 LINE L1 -309 6024 5516 * 468 167 12 0 chr5 24433055 24433139 -175197011 - L1MC1 LINE L1 -822 5511 5427 3006 162 19 6 chr5 24433228 24433764 -175196386 - L1MB1 LINE L1 -91 6077 5535 484 247 27 7 chr5 24433783 24433929 -175196221 - L1MB1 LINE L1 -1536 4610 4462 335 147 13 119 chr5 24433930 24434039 -175196111 + L1PA8A LINE L1 5396 5491 -640 * 2398 212 27 14 chr5 24434034 24434656 -175195494 + L1 LINE L1 4763 5392 -754 22 56 0 0 chr5 24434656 24434692 -175195458 + AT_rich Low_complexity Low_complexity 1 36 0 631 314 18 26 chr5 24435019 24435245 -175194905 + MIR SINE MIR 13 236 -26 201 154 19 58 chr5 24435683 24435735 -175194415 + GA-rich Low_complexity Low_complexity 3 52 0 23 0 0 0 chr5 24435810 24435833 -175194317 + AT_rich Low_complexity Low_complexity 1 23 0 273 57 0 0 chr5 24437405 24437440 -175192710 + (TTTTA)n Simple_repeat Simple_repeat 4 38 0 2002 320 56 40 chr5 24439483 24440419 -175189731 + L2 LINE L2 1812 2762 -552 25 0 0 0 chr5 24441326 24441351 -175188799 + AT_rich Low_complexity Low_complexity 1 25 0 637 139 17 9 chr5 24441999 24442114 -175188036 + L1MA3 LINE L1 15 130 -7435 2252 79 3 0 chr5 24442115 24442405 -175187745 + AluSc SINE Alu 1 291 -18 905 54 0 0 chr5 24442409 24442520 -175187630 - L1P1 LINE L1 -389 5766 5656 18724 181 33 22 chr5 24442545 24445160 -175184990 + L1MA3 LINE L1 118 2702 -5022 2076 174 56 19 chr5 24445160 24445573 -175184577 + MSTA LTR MaLR 1 428 0 18724 181 33 22 chr5 24445573 24447150 -175183000 + L1MA3 LINE L1 2702 4260 -3464 2380 68 7 3 chr5 24447150 24447445 -175182705 + AluY SINE Alu 2 297 -14 18724 181 33 22 chr5 24447445 24450772 -175179378 + L1MA3 LINE L1 4260 7723 -1 478 280 25 13 chr5 24450820 24450977 -175179173 - LTR41 LTR ERVL -605 168 10 927 320 52 18 chr5 24451029 24451467 -175178683 + ERVL LTR ERVL 2120 2572 -3192 357 333 32 20 chr5 24451635 24452011 -175178139 + ERVL LTR ERVL 2777 3213 -2441 592 297 69 29 chr5 24452075 24452351 -175177799 + ERVL LTR ERVL 3362 3648 -2116 261 0 0 0 chr5 24452366 24452395 -175177755 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 425 327 64 88 chr5 24452591 24453141 -175177009 + L2 LINE L2 2735 3262 -51 1776 80 42 0 chr5 24453163 24453400 -175176750 + AluSg SINE Alu 1 247 -63 1894 106 72 10 chr5 24453406 24453699 -175176451 + AluSx SINE Alu 1 311 -1 21 36 0 0 chr5 24455487 24455515 -175174635 + AT_rich Low_complexity Low_complexity 1 28 0 655 246 50 5 chr5 24455758 24455957 -175174193 + L1MA7 LINE L1 6072 6279 -12 21 0 0 0 chr5 24456036 24456057 -175174093 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 24506924 24506962 -175123188 + AT_rich Low_complexity Low_complexity 1 38 0 610 302 36 25 chr5 24507091 24507369 -175122781 - L1ME3A LINE L1 -5 6165 5885 263 264 50 8 chr5 24507406 24507527 -175122623 - L1ME3A LINE L1 -590 5580 5455 1258 199 68 40 chr5 24507611 24507932 -175122218 - THE1C LTR MaLR -45 330 1 3962 152 8 12 chr5 24507932 24508592 -175121558 - THE1C-int LTR MaLR -1 1579 923 2060 91 14 0 chr5 24508769 24509065 -175121085 - L1PA13 LINE L1 -19 6144 5845 359 303 119 32 chr5 24509136 24509387 -175120763 - L1ME3A LINE L1 -2268 3878 3606 235 235 29 0 chr5 24509399 24509467 -175120683 - L1 LINE L1 -2583 3563 3494 3307 215 34 37 chr5 24509499 24510393 -175119757 - L1MB5 LINE L1 -8 6166 5276 264 160 0 0 chr5 24510388 24510438 -175119712 - L1M4c LINE L1 -4996 1388 1339 * 325 317 107 4 chr5 24510532 24510813 -175119337 - L1 LINE L1 -3175 2971 2662 252 0 0 0 chr5 24511853 24511881 -175118269 + (TG)n Simple_repeat Simple_repeat 1 28 0 209 119 24 0 chr5 24511881 24511923 -175118227 + GA-rich Low_complexity Low_complexity 2 44 0 287 289 93 50 chr5 24511932 24512114 -175118036 + L1M4 LINE L1 4636 4840 -1306 2261 83 0 13 chr5 24512114 24512414 -175117736 + AluY SINE Alu 1 296 -15 287 289 93 50 chr5 24512414 24512553 -175117597 + L1M4 LINE L1 4840 4971 -1175 2428 216 31 12 chr5 24512553 24513066 -175117084 + Tigger7 DNA MER2_type 1 523 -1964 450 250 0 0 chr5 24513068 24513156 -175116994 + Tigger7 DNA MER2_type 2500 2587 0 2252 90 0 7 chr5 24513175 24513476 -175116674 + AluY SINE Alu 13 311 0 472 333 41 35 chr5 24513476 24513845 -175116305 + L1M4 LINE L1 4981 5351 -795 1641 176 46 30 chr5 24513895 24514264 -175115886 + THE1C LTR MaLR 1 375 0 4486 153 48 56 chr5 24514266 24515141 -175115009 + THE1C-int LTR MaLR 3 870 -710 219 69 0 0 chr5 24515331 24515360 -175114790 + (CA)n Simple_repeat Simple_repeat 2 30 0 231 203 31 0 chr5 24515420 24515476 -175114674 + L1MC4 LINE L1 6638 6698 -1344 387 0 0 0 chr5 24515476 24515519 -175114631 + (CA)n Simple_repeat Simple_repeat 2 44 0 877 168 5 92 chr5 24515527 24515723 -175114427 - AluJb SINE Alu -133 179 1 1653 87 0 0 chr5 24516078 24516296 -175113854 - AluY SINE Alu -2 309 92 24 32 0 0 chr5 24516313 24516344 -175113806 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 24516860 24516882 -175113268 + AT_rich Low_complexity Low_complexity 1 22 0 333 279 36 9 chr5 24517125 24517236 -175112914 - MER94 DNA DNA -2 132 19 3182 110 2 40 chr5 24517301 24517828 -175112322 - L1PA13 LINE L1 0 6163 5657 339 307 79 42 chr5 24517828 24518017 -175112133 - MIR SINE MIR -57 205 10 206 0 0 65 chr5 24518335 24518366 -175111784 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1708 272 37 54 chr5 24518433 24519029 -175111121 - MLT1E LTR MaLR -7 586 1 189 298 202 29 chr5 24519513 24519617 -175110533 - MIR SINE MIR -93 169 48 1223 242 54 84 chr5 24519754 24520102 -175110048 - MLT2B3 LTR ERVL 0 554 220 5017 114 5 52 chr5 24520102 24520921 -175109229 + LTR17 LTR ERV1 1 780 0 1223 242 54 84 chr5 24520921 24521014 -175109136 - MLT2B3 LTR ERVL -334 220 126 2030 132 10 0 chr5 24521448 24521751 -175108399 + AluSq SINE Alu 1 306 -7 221 269 162 75 chr5 24522811 24522983 -175107167 - L2 LINE L2 -316 2956 2759 4639 27 7 0 chr5 24522983 24523537 -175106613 - L1PA4 LINE L1 0 6155 5598 221 269 162 75 chr5 24523537 24523588 -175106562 - L2 LINE L2 -513 2759 2714 2047 247 17 17 chr5 24524128 24524594 -175105556 + MER70A LTR ERVL 7 472 0 238 179 0 0 chr5 24525271 24525327 -175104823 + L1MC4 LINE L1 6648 6703 -1339 254 104 0 42 chr5 24525327 24525375 -175104775 + (TATATG)n Simple_repeat Simple_repeat 6 51 0 352 281 0 0 chr5 24525378 24525467 -175104683 + L1MC4 LINE L1 6615 6703 -1339 342 311 0 0 chr5 24525387 24525477 -175104673 - L1MC4 LINE L1 -1339 6703 6614 * 230 203 76 0 chr5 24525488 24525567 -175104583 + L1MC4 LINE L1 6615 6699 -1343 230 152 0 0 chr5 24525567 24525613 -175104537 + LTR66 LTR ERVL 394 439 -171 391 165 24 0 chr5 24525613 24525698 -175104452 + (TA)n Simple_repeat Simple_repeat 1 87 0 578 177 29 17 chr5 24525734 24525909 -175104241 + (CATA)n Simple_repeat Simple_repeat 4 180 0 183 205 0 0 chr5 24525912 24525951 -175104199 + (CA)n Simple_repeat Simple_repeat 2 40 0 243 0 0 0 chr5 24526716 24526743 -175103407 + (TG)n Simple_repeat Simple_repeat 2 28 0 1402 233 3 18 chr5 24526870 24527201 -175102949 + MLT1A1 LTR MaLR 29 354 -11 805 85 31 0 chr5 24527219 24527349 -175102801 + (GAAA)n Simple_repeat Simple_repeat 2 135 0 423 338 83 26 chr5 24527391 24527693 -175102457 - L2 LINE L2 -1606 1708 1390 328 162 176 0 chr5 24528306 24528374 -175101776 - MADE1 DNA Mariner 0 80 1 22 35 0 0 chr5 24528380 24528409 -175101741 + AT_rich Low_complexity Low_complexity 1 29 0 2102 112 0 0 chr5 24528456 24528780 -175101370 - AluSq SINE Alu 0 324 1 1355 193 55 80 chr5 24528996 24529058 -175101092 + MLT1B LTR MaLR 1 63 -327 2057 189 30 32 chr5 24529058 24529492 -175100658 - Tigger2a DNA MER2_type -1 433 1 1355 193 55 80 chr5 24529492 24529829 -175100321 + MLT1B LTR MaLR 63 390 0 1951 123 0 4 chr5 24530058 24530334 -175099816 + AluSc SINE Alu 3 277 -32 360 64 0 0 chr5 24530334 24530381 -175099769 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 2096 115 0 7 chr5 24530418 24530714 -175099436 + AluSx SINE Alu 1 294 -18 465 19 0 0 chr5 24530714 24530768 -175099382 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 888 275 27 27 chr5 24531041 24531339 -175098811 - MLT1D LTR MaLR -2 503 206 1112 257 13 10 chr5 24531459 24531759 -175098391 - MLT1J2-int LTR MaLR -768 603 303 1914 184 29 20 chr5 24531789 24532328 -175097822 + L1MA9 LINE L1 5590 6312 0 600 286 5 25 chr5 24532412 24532611 -175097539 - MLT1J2-int LTR MaLR -1174 197 3 293 212 30 0 chr5 24532614 24532680 -175097470 - MLT2F LTR ERVL -1 662 595 3454 234 22 0 chr5 24532681 24533440 -175096710 - ERVL LTR ERVL -3322 2442 1667 3593 259 28 26 chr5 24533670 24534182 -175095968 + ERVL LTR ERVL 2419 2935 -2829 3003 80 30 18 chr5 24534182 24534576 -175095574 + MLT2A1 LTR ERVL 1 402 -42 312 70 0 0 chr5 24534576 24534619 -175095531 + (TG)n Simple_repeat Simple_repeat 2 44 0 3003 80 30 18 chr5 24534619 24534663 -175095487 + MLT2A1 LTR ERVL 402 444 0 3593 259 28 26 chr5 24534663 24535139 -175095011 + ERVL LTR ERVL 2935 3409 -2355 194 314 144 17 chr5 24536164 24536282 -175093868 - L3b LINE CR1 -178 1405 1273 434 316 88 50 chr5 24536856 24537252 -175092898 - MLT1J2 LTR MaLR -24 426 16 330 328 16 0 chr5 24537386 24537511 -175092639 - MIR SINE MIR -12 250 124 356 217 26 72 chr5 24538720 24538872 -175091278 - MIR SINE MIR -31 231 87 3681 246 82 18 chr5 24538903 24539970 -175090180 + L1PA12 LINE L1 610 1713 -5868 315 0 0 0 chr5 24539971 24540006 -175090144 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1829 213 22 25 chr5 24540030 24540477 -175089673 + L1PA12 LINE L1 2402 2847 -4727 1328 175 12 4 chr5 24540474 24540720 -175089430 - THE1C-int LTR MaLR -1330 250 3 * 1704 167 58 25 chr5 24540724 24541083 -175089067 - THE1C LTR MaLR -4 371 1 2417 208 10 4 chr5 24541083 24541598 -175088552 + L1PA12 LINE L1 3333 3850 -3734 4511 104 23 0 chr5 24541601 24542262 -175087888 + L1PA12 LINE L1 5260 5935 -233 1164 153 0 5 chr5 24542318 24542507 -175087643 - L1PA11 LINE L1 -37 6137 5950 561 170 6 132 chr5 24542515 24542575 -175087575 - MIR SINE MIR -92 170 104 2828 6 0 0 chr5 24542575 24542886 -175087264 + AluYa5 SINE Alu 1 311 0 561 170 6 132 chr5 24542886 24542984 -175087166 - MIR SINE MIR -158 104 32 21 57 0 0 chr5 24543054 24543089 -175087061 + AT_rich Low_complexity Low_complexity 1 35 0 286 326 37 59 chr5 24543992 24544179 -175085971 - MER91B DNA MER1_type -5 185 3 1649 204 76 20 chr5 24544191 24544597 -175085553 + MSTB1 LTR MaLR 1 429 -3 29 28 0 0 chr5 24544961 24544997 -175085153 + AT_rich Low_complexity Low_complexity 1 36 0 2097 167 60 19 chr5 24545194 24545699 -175084451 - MLT2A2 LTR ERVL 0 554 1 2393 80 3 3 chr5 24546152 24546464 -175083686 - AluSp SINE Alu -1 312 1 1943 145 62 28 chr5 24546665 24547017 -175083133 - THE1B LTR MaLR 0 364 1 426 251 31 9 chr5 24547629 24547774 -175082376 - L1M4 LINE L1 -394 5853 5705 512 297 46 10 chr5 24547777 24547995 -175082155 - L1M4 LINE L1 -620 5613 5415 * 1023 253 55 62 chr5 24547987 24548923 -175081227 - L1MEc LINE L1 -2517 3698 839 876 204 30 25 chr5 24549282 24549483 -175080667 + MER6A DNA MER2_type 1 202 -403 941 149 0 0 chr5 24549483 24549631 -175080519 + MER6A DNA MER2_type 457 604 -1 701 190 22 49 chr5 24550506 24550690 -175079460 - MER53 DNA DNA 0 189 11 26 30 0 0 chr5 24551004 24551037 -175079113 + AT_rich Low_complexity Low_complexity 1 33 0 182 321 47 19 chr5 24551529 24551635 -175078515 + L2 LINE L2 2929 3037 -276 2225 119 0 0 chr5 24552351 24552661 -175077489 + AluSx SINE Alu 3 312 0 188 289 133 12 chr5 24552978 24553061 -175077089 - MIR SINE MIR -122 140 48 258 260 0 49 chr5 24555137 24555260 -175074890 - L1MC4 LINE L1 0 8042 7926 1668 187 167 8 chr5 24555553 24555912 -175074238 - MSTA LTR MaLR -11 417 2 5313 204 8 20 chr5 24555913 24556981 -175073169 - MSTA-int LTR MaLR 0 1580 526 782 268 93 12 chr5 24556992 24557421 -175072729 + L1ME1 LINE L1 4771 5234 -912 4576 169 71 5 chr5 24557423 24558254 -175071896 + MER4D LTR ERV1 1 886 -17 1314 264 124 60 chr5 24558380 24559179 -175070971 + L1ME1 LINE L1 5312 6161 -5 925 146 20 7 chr5 24559447 24559598 -175070552 + MER4E LTR ERV1 335 487 -292 1356 238 23 26 chr5 24559778 24560169 -175069981 - MLT1B LTR MaLR 0 390 1 230 316 88 18 chr5 24560207 24560321 -175069829 + MIR3 SINE MIR 36 157 -51 187 345 106 18 chr5 24562616 24562729 -175067421 - MIR SINE MIR -124 138 16 274 296 0 34 chr5 24563212 24563300 -175066850 + MIR SINE MIR 174 258 -4 462 368 66 22 chr5 24563838 24564248 -175065902 - LTR16A LTR ERVL 0 450 23 344 341 51 46 chr5 24564821 24565038 -175065112 + MIR SINE MIR 45 262 0 351 0 0 0 chr5 24565234 24565273 -175064877 + (TA)n Simple_repeat Simple_repeat 1 39 0 3859 41 0 0 chr5 24565273 24565735 -175064415 - L1PA4 LINE L1 -15 6140 5679 1902 171 9 6 chr5 24565773 24566117 -175064033 - L1PA15 LINE L1 -6 6159 5815 1332 49 0 12 chr5 24566149 24566311 -175063839 + AluY SINE Alu 1 160 -151 7496 199 43 17 chr5 24566312 24567731 -175062419 - L1PA15 LINE L1 -363 5802 4308 2328 64 3 49 chr5 24567731 24568057 -175062093 + AluY SINE Alu 1 311 0 7496 199 43 17 chr5 24568057 24568859 -175061291 - L1PA15 LINE L1 -1857 4308 3529 3791 219 52 9 chr5 24568945 24569842 -175060308 - L1MD2 LINE L1 -28 7142 6207 1613 236 54 58 chr5 24570010 24570159 -175059991 + L1ME1 LINE L1 4672 4820 -1326 1977 168 31 11 chr5 24570159 24570516 -175059634 - THE1B LTR MaLR 0 364 1 1613 236 54 58 chr5 24570516 24571018 -175059132 + L1ME1 LINE L1 4820 5320 -826 47 0 0 0 chr5 24571018 24571065 -175059085 + AT_rich Low_complexity Low_complexity 1 47 0 2474 245 75 3 chr5 24571081 24571788 -175058362 + L1ME1 LINE L1 5330 6087 -79 1582 171 59 39 chr5 24572363 24572720 -175057430 - THE1B LTR MaLR 0 364 1 8484 162 21 40 chr5 24572720 24574328 -175055822 - THE1B-int LTR MaLR -1 1579 3 1450 177 75 39 chr5 24574330 24574692 -175055458 - THE1C LTR MaLR 0 375 1 2286 98 3 0 chr5 24575073 24575370 -175054780 + AluSp SINE Alu 1 298 -15 16940 126 5 8 chr5 24575407 24578950 -175051200 - L1PA8A LINE L1 -29 6102 2570 1056 198 33 5 chr5 24578986 24579198 -175050952 + MER20 DNA MER1_type 2 219 0 493 241 71 61 chr5 24579471 24579562 -175050588 + L1ME1 LINE L1 2781 2870 -3276 668 160 8 8 chr5 24579562 24579693 -175050457 + L1MA6 LINE L1 6163 6293 -7 493 241 71 61 chr5 24579693 24579896 -175050254 + L1ME1 LINE L1 2870 3078 -3068 24 32 0 0 chr5 24579925 24579956 -175050194 + AT_rich Low_complexity Low_complexity 1 31 0 241 215 15 15 chr5 24579959 24580024 -175050126 - L1MD2 LINE L1 -873 6084 6020 933 236 148 116 chr5 24580165 24580887 -175049263 + L1ME1 LINE L1 5404 6148 -18 31 0 0 0 chr5 24582659 24582690 -175047460 + AT_rich Low_complexity Low_complexity 1 31 0 184 77 96 0 chr5 24583398 24583450 -175046700 + GA-rich Low_complexity Low_complexity 3 59 0 356 191 16 24 chr5 24583453 24583579 -175046571 + G-rich Low_complexity Low_complexity 5 129 0 324 314 84 42 chr5 24584471 24584875 -175045275 + L1M4 LINE L1 2558 2978 -3168 1754 236 50 28 chr5 24585352 24585915 -175044235 - L1MD2 LINE L1 -2080 4877 4303 1332 250 80 28 chr5 24585923 24586211 -175043939 - L1MD2 LINE L1 -5854 1005 687 294 29 0 0 chr5 24586211 24586246 -175043904 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1332 250 80 28 chr5 24586246 24586381 -175043769 - L1MD2 LINE L1 -6172 687 560 194 62 31 0 chr5 24586456 24586488 -175043662 + (GA)n Simple_repeat Simple_repeat 2 34 0 1063 233 110 36 chr5 24586562 24586871 -175043279 + L1M4b LINE L1 13 344 -6515 21 57 0 0 chr5 24587029 24587064 -175043086 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 24587649 24587680 -175042470 + AT_rich Low_complexity Low_complexity 1 31 0 576 255 119 100 chr5 24588056 24588477 -175041673 + MLT1A2 LTR MaLR 17 374 0 205 222 42 42 chr5 24588626 24588698 -175041452 + L2 LINE L2 3234 3305 -8 225 51 102 85 chr5 24589554 24589613 -175040537 - L1PA10 LINE L1 -2 6166 6107 413 221 16 49 chr5 24589657 24589719 -175040431 - MER20 DNA MER1_type 0 219 161 1963 186 53 17 chr5 24589719 24590132 -175040018 + MSTA LTR MaLR 1 428 0 413 221 16 49 chr5 24590132 24590191 -175039959 - MER20 DNA MER1_type -58 161 102 1813 158 57 3 chr5 24590191 24590507 -175039643 - MER1B DNA MER1_type -1 336 4 198 398 91 8 chr5 24590756 24590997 -175039153 - L2 LINE L2 -908 2406 2146 30 45 0 0 chr5 24591249 24591293 -175038857 + AT_rich Low_complexity Low_complexity 1 44 0 1782 153 58 9 chr5 24592102 24592429 -175037721 + MER61A LTR ERV1 1 343 0 222 105 0 0 chr5 24593454 24593492 -175036658 + (TTTTG)n Simple_repeat Simple_repeat 4 41 0 314 359 59 48 chr5 24593611 24593965 -175036185 - L1MEd LINE L1 -5492 627 270 380 350 172 13 chr5 24594502 24594962 -175035188 - L3 LINE CR1 -77 1500 968 27 81 0 0 chr5 24595871 24595933 -175034217 + AT_rich Low_complexity Low_complexity 1 62 0 200 313 42 0 chr5 24596004 24596100 -175034050 + MIR SINE MIR 127 226 -36 237 173 0 39 chr5 24596223 24596275 -175033875 - MER76 LTR ERV -631 57 8 21 36 0 0 chr5 24596283 24596311 -175033839 + AT_rich Low_complexity Low_complexity 1 28 0 1657 121 23 23 chr5 24596360 24596624 -175033526 + AluSp SINE Alu 3 266 -47 550 143 0 27 chr5 24596646 24596758 -175033392 + (GAAA)n Simple_repeat Simple_repeat 3 111 0 725 61 10 0 chr5 24596863 24596962 -175033188 + (GGAA)n Simple_repeat Simple_repeat 3 102 0 718 223 76 65 chr5 24597677 24598051 -175032099 + L1M4 LINE L1 2760 3141 -3005 3057 130 6 6 chr5 24598051 24598536 -175031614 - L1PB2 LINE L1 -4 6147 5663 718 223 76 65 chr5 24598536 24598622 -175031528 + L1M4 LINE L1 3141 3225 -2921 316 261 103 18 chr5 24598713 24598878 -175031272 + L1M4 LINE L1 3338 3516 -2630 1275 225 10 24 chr5 24598883 24599007 -175031143 + AluJo SINE Alu 1 125 -187 252 0 0 0 chr5 24599007 24599035 -175031115 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1275 225 10 24 chr5 24599035 24599203 -175030947 + AluJo SINE Alu 125 289 -23 235 224 86 35 chr5 24599220 24599336 -175030814 + L1M4 LINE L1 3510 3631 -2515 30 27 0 0 chr5 24599409 24599446 -175030704 + AT_rich Low_complexity Low_complexity 1 37 0 2566 101 3 0 chr5 24599737 24600103 -175030047 - L1PB1 LINE L1 0 6151 5785 290 45 36 80 chr5 24600107 24600219 -175029931 + (TA)n Simple_repeat Simple_repeat 2 108 0 3289 101 8 12 chr5 24600219 24600716 -175029434 - L1PB1 LINE L1 -362 5789 5295 676 173 0 0 chr5 24600716 24600826 -175029324 + FRAM SINE Alu 1 105 -71 375 105 0 0 chr5 24600853 24600910 -175029240 + (TAAA)n Simple_repeat Simple_repeat 3 59 0 709 185 81 0 chr5 24601047 24601220 -175028930 - MER53 DNA DNA 0 189 3 857 269 20 5 chr5 24601224 24601425 -175028725 + MER58A DNA MER1_type 21 224 0 252 289 134 35 chr5 24601995 24602137 -175028013 - L2 LINE L2 0 3313 3158 613 168 87 40 chr5 24602419 24602568 -175027582 - AluJb SINE Alu -27 285 130 360 0 0 0 chr5 24602569 24602609 -175027541 + (TG)n Simple_repeat Simple_repeat 2 41 0 294 76 114 0 chr5 24602615 24602747 -175027403 + (TA)n Simple_repeat Simple_repeat 1 147 0 24 85 0 0 chr5 24603376 24603435 -175026715 + AT_rich Low_complexity Low_complexity 1 59 0 1986 116 10 23 chr5 24604853 24605155 -175024995 + AluSp SINE Alu 1 298 -15 25 31 0 0 chr5 24605163 24605195 -175024955 + AT_rich Low_complexity Low_complexity 1 32 0 15862 184 43 14 chr5 24605270 24612696 -175017454 + L1MA2 LINE L1 15 7723 0 189 0 0 0 chr5 24613067 24613088 -175017062 + (A)n Simple_repeat Simple_repeat 1 21 0 345 308 103 0 chr5 24613904 24614021 -175016129 - L2 LINE L2 -1 3312 3184 30 27 0 0 chr5 24615042 24615079 -175015071 + AT_rich Low_complexity Low_complexity 1 37 0 2005 137 0 0 chr5 24615114 24615398 -175014752 - AluSg SINE Alu -24 286 3 1872 169 29 8 chr5 24615474 24615858 -175014292 - L1MA8 LINE L1 -7 6284 5893 278 0 54 0 chr5 24615864 24615901 -175014249 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 797 272 31 9 chr5 24617660 24617884 -175012266 + MIR SINE MIR 31 259 -3 218 353 168 0 chr5 24618033 24618152 -175011998 + L2 LINE L2 3125 3263 -9 2320 73 0 0 chr5 24620137 24620468 -175009682 - AluY SINE Alu 0 331 1 2215 138 69 12 chr5 24620705 24621110 -175009040 + MSTA LTR MaLR 1 428 0 189 107 0 0 chr5 24621299 24621327 -175008823 + (CGGGG)n Simple_repeat Simple_repeat 1 28 0 332 377 49 12 chr5 24623566 24623810 -175006340 + L2 LINE L2 2127 2379 -935 22 56 0 0 chr5 24624225 24624261 -175005889 + AT_rich Low_complexity Low_complexity 1 36 0 28 48 0 0 chr5 24624297 24624339 -175005811 + AT_rich Low_complexity Low_complexity 1 42 0 1554 171 3 52 chr5 24625369 24625678 -175004472 - AluJo SINE Alu -18 294 1 21 0 0 0 chr5 24626132 24626153 -175003997 + AT_rich Low_complexity Low_complexity 1 21 0 273 57 0 0 chr5 24626163 24626198 -175003952 + (TC)n Simple_repeat Simple_repeat 2 36 0 275 95 0 32 chr5 24626244 24626307 -175003843 - LTR66 LTR ERVL -171 439 379 2068 135 3 3 chr5 24626841 24627137 -175003013 + AluSx SINE Alu 1 296 -16 4373 177 18 55 chr5 24629461 24630553 -174999597 - L1MB1 LINE L1 -1 6167 5096 1293 221 5 63 chr5 24630549 24630929 -174999221 + L1 LINE L1 4410 4767 -1379 * 1340 219 21 53 chr5 24630937 24631194 -174998956 + MER74C LTR ERVL 131 376 -84 1904 129 28 0 chr5 24631194 24631480 -174998670 - AluSx SINE Alu -15 297 4 1340 219 21 53 chr5 24631480 24631560 -174998590 + MER74C LTR ERVL 376 457 -3 180 0 0 0 chr5 24632837 24632857 -174997293 + (T)n Simple_repeat Simple_repeat 1 20 0 267 133 0 0 chr5 24633919 24633964 -174996186 + (TG)n Simple_repeat Simple_repeat 1 45 0 963 235 98 15 chr5 24633983 24634301 -174995849 + L1MB7 LINE L1 5831 6174 -10 295 275 78 115 chr5 24635440 24635735 -174994415 + MLT1H LTR MaLR 110 393 -156 7507 33 0 0 chr5 24636055 24637522 -174992628 - L1PA4 LINE L1 -3 6152 4686 8582 22 1 0 chr5 24637522 24638531 -174991619 + L1PA4 LINE L1 3698 4707 -1439 24 0 0 0 chr5 24638891 24638915 -174991235 + AT_rich Low_complexity Low_complexity 1 24 0 3431 34 0 0 chr5 24638961 24639374 -174990776 + L1PA4 LINE L1 5738 6150 -5 1130 211 0 38 chr5 24640341 24640602 -174989548 - MLT1D LTR MaLR -1 504 254 1411 165 55 4 chr5 24640625 24640880 -174989270 + AluJb SINE Alu 1 268 -44 189 0 0 0 chr5 24640931 24640952 -174989198 + (TAA)n Simple_repeat Simple_repeat 1 21 0 941 242 4 37 chr5 24640952 24641196 -174988954 - MLT1D LTR MaLR -388 238 3 435 296 9 0 chr5 24741261 24741376 -174888774 - L1MEc LINE L1 -6150 246 131 21 0 0 0 chr5 24741401 24741422 -174888728 + AT_rich Low_complexity Low_complexity 1 21 0 354 282 19 19 chr5 24742150 24742253 -174887897 - L2 LINE L2 -2 3311 3209 22 56 0 0 chr5 24742432 24742468 -174887682 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5 24742874 24742910 -174887240 + AT_rich Low_complexity Low_complexity 1 36 0 304 216 32 24 chr5 24743069 24743194 -174886956 + (TA)n Simple_repeat Simple_repeat 2 127 0 216 319 49 49 chr5 24743276 24743439 -174886711 - L2 LINE L2 0 3313 3151 23 33 0 0 chr5 24743662 24743692 -174886458 + AT_rich Low_complexity Low_complexity 1 30 0 961 307 97 17 chr5 24744234 24744648 -174885502 + L1M2 LINE L1 4 450 -6399 1224 254 0 43 chr5 24745384 24745687 -174884463 + L1PA16 LINE L1 444 733 -6116 6622 250 88 31 chr5 24746115 24746988 -174883162 + L1PA16 LINE L1 1415 2237 -4612 2220 164 76 0 chr5 24746988 24747384 -174882766 - MSTB LTR MaLR 0 426 1 6622 250 88 31 chr5 24747384 24747595 -174882555 + L1PA16 LINE L1 2237 2435 -4414 1632 210 7 3 chr5 24747595 24747904 -174882246 + AluJb SINE Alu 1 310 -2 6622 250 88 31 chr5 24747904 24750632 -174879518 + L1PA16 LINE L1 2435 5691 -1158 420 133 57 203 chr5 24750630 24750788 -174879362 + L1 LINE L1 3589 3723 -2423 * 5156 146 9 28 chr5 24750790 24751998 -174878152 + L1PA16 LINE L1 5678 6866 -3 230 333 0 34 chr5 24752247 24752364 -174877786 - MIR SINE MIR -13 249 137 938 241 89 40 chr5 24752564 24752912 -174877238 - MLT1A1 LTR MaLR 0 365 1 25 0 0 0 chr5 24754048 24754073 -174876077 + AT_rich Low_complexity Low_complexity 1 25 0 439 235 52 46 chr5 24754133 24754286 -174875864 - MER5A DNA MER1_type -6 183 30 1357 259 41 47 chr5 24754306 24754793 -174875357 + MLT1D LTR MaLR 13 496 -9 2139 118 0 0 chr5 24754879 24755176 -174874974 + AluSg SINE Alu 1 297 -13 43 20 0 0 chr5 24755653 24755703 -174874447 + AT_rich Low_complexity Low_complexity 1 50 0 1560 187 49 38 chr5 24757042 24757411 -174872739 - THE1C LTR MaLR 0 375 3 9932 128 16 30 chr5 24757413 24759011 -174871139 - THE1C-int LTR MaLR 0 1580 5 1980 148 32 37 chr5 24759016 24759393 -174870757 - THE1C LTR MaLR 0 375 1 1681 332 163 24 chr5 24759405 24761103 -174869047 - L2 LINE L2 -12 3301 1367 191 298 31 15 chr5 24761336 24761411 -174868739 + MIR SINE MIR 73 149 -59 289 233 19 58 chr5 24761572 24761675 -174868475 + LTR37B LTR ERV1 203 301 -167 * 573 207 69 25 chr5 24761665 24761868 -174868282 + LTR37B LTR ERV1 257 468 0 26 0 0 0 chr5 24761966 24761992 -174868158 + AT_rich Low_complexity Low_complexity 1 26 0 2393 69 0 7 chr5 24762180 24762486 -174867664 - AluY SINE Alu -7 304 1 1446 211 84 96 chr5 24762962 24763474 -174866676 + LTR53 LTR ERVL 14 519 0 765 110 0 0 chr5 24763528 24763646 -174866504 + (TCCA)n Simple_repeat Simple_repeat 1 118 0 22 0 0 0 chr5 24763755 24763777 -174866373 + AT_rich Low_complexity Low_complexity 1 22 0 296 286 0 22 chr5 24763947 24764038 -174866112 - L2 LINE L2 0 3313 3225 595 328 44 22 chr5 24764204 24764524 -174865626 - L2 LINE L2 -393 2921 2595 21 100 0 0 chr5 24764669 24764739 -174865411 + AT_rich Low_complexity Low_complexity 1 70 0 21 57 0 0 chr5 24765768 24765803 -174864347 + AT_rich Low_complexity Low_complexity 1 35 0 1959 120 0 4 chr5 24766434 24766708 -174863442 - AluSx SINE Alu -35 277 5 287 337 6 91 chr5 24769090 24769265 -174860885 + L2 LINE L2 353 512 -2802 372 43 0 0 chr5 24771040 24771086 -174859064 + (GA)n Simple_repeat Simple_repeat 2 47 0 305 319 88 0 chr5 24771171 24771284 -174858866 - MIR SINE MIR -74 188 66 24 0 0 0 chr5 24772462 24772486 -174857664 + AT_rich Low_complexity Low_complexity 1 24 0 358 337 17 23 chr5 24772670 24772842 -174857308 - L2 LINE L2 -233 3039 2869 22 0 0 0 chr5 24773705 24773727 -174856423 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 24774402 24774445 -174855705 + AT_rich Low_complexity Low_complexity 1 43 0 630 271 30 15 chr5 24774805 24775008 -174855142 + L1ME3A LINE L1 5922 6127 -43 231 125 0 0 chr5 24775202 24775242 -174854908 + (TG)n Simple_repeat Simple_repeat 1 40 0 22 0 0 0 chr5 24775959 24775981 -174854169 + AT_rich Low_complexity Low_complexity 1 22 0 345 355 74 0 chr5 24776021 24776210 -174853940 - HERVL LTR ERVL -3600 2054 1852 504 286 97 31 chr5 24776292 24776551 -174853599 - MLT1I LTR MaLR -18 391 116 28 0 0 0 chr5 24778352 24778380 -174851770 + AT_rich Low_complexity Low_complexity 1 28 0 339 283 7 76 chr5 24779517 24779569 -174850581 - LTR65 LTR ERV1 0 669 615 2384 270 28 15 chr5 24779569 24780244 -174849906 + MER76 LTR ERV 5 688 0 339 283 7 76 chr5 24780244 24780336 -174849814 - LTR65 LTR ERV1 -54 615 535 1252 199 36 20 chr5 24780550 24780856 -174849294 - LTR65 LTR ERV1 -276 393 83 1554 211 140 24 chr5 24781487 24781938 -174848212 + MLT1D LTR MaLR 1 503 -2 32 26 0 0 chr5 24782380 24782419 -174847731 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 24783151 24783173 -174846977 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 24783359 24783380 -174846770 + AT_rich Low_complexity Low_complexity 1 21 0 541 345 103 11 chr5 24783525 24783876 -174846274 + L2 LINE L2 1931 2313 -1001 1499 168 84 19 chr5 24784416 24784738 -174845412 - MER61A LTR ERV1 0 343 1 26 50 0 0 chr5 24785284 24785324 -174844826 + AT_rich Low_complexity Low_complexity 1 40 0 183 339 17 0 chr5 24787354 24787413 -174842737 + L2 LINE L2 1251 1310 -2004 306 297 134 39 chr5 24787511 24787664 -174842486 + L2 LINE L2 1622 1759 -1555 2234 108 0 3 chr5 24787664 24787969 -174842181 + AluSp SINE Alu 1 304 -9 306 297 134 39 chr5 24787969 24788121 -174842029 + L2 LINE L2 1759 1956 -1358 197 65 32 0 chr5 24788127 24788158 -174841992 + (TAGA)n Simple_repeat Simple_repeat 1 32 0 933 260 40 173 chr5 24788490 24788956 -174841194 + L2 LINE L2 2001 2308 -1005 2657 30 0 0 chr5 24788956 24789260 -174840890 + AluY SINE Alu 1 304 -7 933 260 40 173 chr5 24789260 24789906 -174840244 + L2 LINE L2 2308 3038 -275 1954 106 4 4 chr5 24789921 24790196 -174839954 + AluSc SINE Alu 3 277 -32 231 114 0 0 chr5 24790196 24790240 -174839910 + (TTAA)n Simple_repeat Simple_repeat 3 46 0 6186 58 58 11 chr5 24791200 24792090 -174838060 + L1PA7 LINE L1 5223 6153 -1 314 258 150 42 chr5 24792275 24792395 -174837755 + L2 LINE L2 3176 3308 -5 1213 217 134 93 chr5 24793295 24793344 -174836806 - MLT2B1 LTR ERVL -7 513 467 192 40 0 0 chr5 24793344 24793369 -174836781 + (CA)n Simple_repeat Simple_repeat 2 26 0 1213 217 134 93 chr5 24793369 24793812 -174836338 - MLT2B1 LTR ERVL -53 467 1 274 358 0 59 chr5 24794618 24794805 -174835345 + L2 LINE L2 2479 2654 -660 832 280 48 46 chr5 24794822 24795283 -174834867 - MLT1H LTR MaLR -8 541 41 288 330 20 20 chr5 24795666 24795766 -174834384 + L2 LINE L2 3214 3313 0 1334 219 29 4 chr5 24795903 24796197 -174833953 - AluJb SINE Alu 0 301 1 371 235 128 28 chr5 24796466 24796645 -174833505 + L1MC4 LINE L1 7699 7895 -147 300 70 0 0 chr5 24796646 24796689 -174833461 + (TG)n Simple_repeat Simple_repeat 2 44 0 253 281 16 0 chr5 24796695 24796759 -174833391 + GA-rich Low_complexity Low_complexity 2 66 0 225 0 0 0 chr5 24796887 24796912 -174833238 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 333 0 0 0 chr5 24796911 24796948 -174833202 + (CA)n Simple_repeat Simple_repeat 2 38 0 408 141 3 67 chr5 24796967 24797601 -174832549 + (TA)n Simple_repeat Simple_repeat 1 593 0 213 281 0 35 chr5 24798898 24798955 -174831195 - L3 LINE CR1 -2 1575 1521 239 312 72 22 chr5 24799856 24799994 -174830156 + MLT1J1 LTR MaLR 21 165 -281 657 282 67 20 chr5 24800736 24800991 -174829159 - LTR16A LTR ERVL -26 424 158 321 271 110 79 chr5 24802238 24802592 -174827558 + L1ME4a LINE L1 5599 5963 -158 3859 34 0 0 chr5 24802810 24803284 -174826866 - L1PA2 LINE L1 -793 5353 4880 7277 17 0 0 chr5 24803284 24804116 -174826034 + L1PA2 LINE L1 5323 6155 0 34 0 0 0 chr5 24804116 24804150 -174826000 + AT_rich Low_complexity Low_complexity 1 34 0 5676 203 23 3 chr5 24804749 24806704 -174823446 + L1PA15 LINE L1 3958 5953 -212 258 130 0 0 chr5 24806718 24806764 -174823386 + LTR66 LTR ERVL 394 439 -171 2643 117 23 5 chr5 24806788 24807181 -174822969 - MLT2A1 LTR ERVL -44 400 1 5886 105 21 40 chr5 24807181 24808088 -174822062 - HERVL-A1 LTR ERVL 0 5654 4765 8366 98 14 0 chr5 24808089 24809216 -174820934 - HERVL LTR ERVL -2285 3369 2227 5441 88 4 4 chr5 24809212 24809936 -174820214 - HERVL LTR ERVL -4929 725 2 * 301 275 11 11 chr5 24809968 24810059 -174820091 - L1MC4 LINE L1 -1339 6703 6613 261 138 0 35 chr5 24810161 24810219 -174819931 - L1MC4 LINE L1 -1339 6703 6648 2470 123 36 5 chr5 24810234 24810624 -174819526 - MLT2A1 LTR ERVL -41 403 2 556 188 38 30 chr5 24810628 24810761 -174819389 + L1PA15 LINE L1 6032 6165 0 223 227 30 15 chr5 24811247 24811313 -174818837 + CT-rich Low_complexity Low_complexity 5 71 0 1397 296 91 22 chr5 24811552 24811620 -174818530 + L1MC/D LINE L1 37 99 -6297 207 114 0 0 chr5 24811620 24811655 -174818495 + (CA)n Simple_repeat Simple_repeat 2 36 0 1397 296 91 22 chr5 24811655 24812302 -174817848 + L1MC/D LINE L1 99 801 -5595 * 1874 280 72 12 chr5 24812280 24813187 -174816963 + L1MC/D LINE L1 4575 5534 -743 695 287 54 16 chr5 24813204 24813522 -174816628 - MLT1G LTR MaLR -292 298 4 2834 10 0 0 chr5 24813973 24814284 -174815866 + AluYa5 SINE Alu 1 311 0 1151 187 37 8 chr5 24815142 24815388 -174814762 - L1MD2 LINE L1 -20 6339 6087 214 149 21 21 chr5 24815630 24815677 -174814473 + (TAA)n Simple_repeat Simple_repeat 2 48 0 23 0 0 0 chr5 24815799 24815822 -174814328 + AT_rich Low_complexity Low_complexity 1 23 0 195 162 0 0 chr5 24815897 24815934 -174814216 + (CA)n Simple_repeat Simple_repeat 2 38 0 2675 265 69 31 chr5 24815957 24816818 -174813332 + MER45B DNA AcHobo 4 910 -671 869 92 39 0 chr5 24816818 24816948 -174813202 + L1PA13 LINE L1 6028 6162 -1 2675 265 69 31 chr5 24816948 24817085 -174813065 + MER45B DNA AcHobo 910 1040 0 625 276 85 41 chr5 24817088 24817987 -174812163 + L1ME1 LINE L1 3765 4623 -1543 1386 187 38 54 chr5 24817987 24818303 -174811847 - AluJb SINE Alu 0 312 2 625 276 85 41 chr5 24818303 24819552 -174810598 + L1ME1 LINE L1 4623 6161 -5 233 278 78 37 chr5 24819874 24820065 -174810085 - L1MD2 LINE L1 -2350 5458 5260 327 343 62 37 chr5 24820120 24820473 -174809677 - L1MD2 LINE L1 -984 5162 4801 1903 132 7 0 chr5 24820547 24820819 -174809331 + AluSg SINE Alu 5 278 -32 21 57 0 0 chr5 24821115 24821150 -174809000 + AT_rich Low_complexity Low_complexity 1 35 0 207 162 0 0 chr5 24821238 24821275 -174808875 + (CA)n Simple_repeat Simple_repeat 2 38 0 1986 188 3 3 chr5 24823846 24824197 -174805953 + MER47A DNA MER2_type 16 366 0 649 292 182 23 chr5 24824306 24824614 -174805536 + MLT1G1 LTR MaLR 161 517 -78 715 246 45 6 chr5 24825476 24825655 -174804495 - MER58A DNA MER1_type -37 187 2 2362 78 3 3 chr5 24825774 24826081 -174804069 - AluSc SINE Alu -2 307 1 626 349 79 19 chr5 24826573 24827117 -174803033 - L2 LINE L2 -47 3266 2687 198 284 0 40 chr5 24827464 24827538 -174802612 - L2 LINE L2 -769 2545 2475 198 0 0 0 chr5 24827657 24827679 -174802471 + (TTA)n Simple_repeat Simple_repeat 3 24 0 582 15 0 0 chr5 24827701 24827768 -174802382 + L1PA4 LINE L1 5898 5964 -191 1762 112 14 25 chr5 24827886 24828164 -174801986 - THE1C LTR MaLR 0 375 101 1680 215 36 29 chr5 24828851 24829242 -174800908 - MSTD LTR MaLR 0 381 2 509 316 23 12 chr5 24830028 24830199 -174799951 + MER5B DNA MER1_type 6 178 0 1441 242 57 22 chr5 24830226 24830731 -174799419 - Charlie1b DNA MER1_type 0 523 1 21 0 0 0 chr5 24830840 24830861 -174799289 + AT_rich Low_complexity Low_complexity 1 21 0 2286 276 81 33 chr5 24830933 24832019 -174798131 - L1MC4a LINE L1 -4 7804 6667 203 278 14 0 chr5 24832499 24832571 -174797579 + (TA)n Simple_repeat Simple_repeat 1 73 0 2606 147 43 6 chr5 24833229 24833713 -174796437 - L1MA4 LINE L1 -398 5902 5401 1967 145 44 20 chr5 24833713 24834115 -174796035 + L1MA4 LINE L1 5875 6291 -9 3058 86 14 0 chr5 24834432 24834860 -174795290 - L1PA7 LINE L1 -8 6146 5713 246 282 0 42 chr5 24835380 24835451 -174794699 - L2 LINE L2 -1 3271 3204 727 246 174 0 chr5 24835807 24836014 -174794136 - MLT1D LTR MaLR 0 505 263 560 250 39 69 chr5 24836023 24836255 -174793895 + L1M4 LINE L1 4862 5086 -1060 7659 110 8 2 chr5 24836265 24838209 -174791941 - L1PA8 LINE L1 0 6172 4207 1029 242 17 0 chr5 24838222 24838453 -174791697 - MLT1D LTR MaLR -268 237 3 605 236 16 0 chr5 24838569 24838760 -174791390 + L1MD3 LINE L1 7800 7993 -2 4046 121 20 3 chr5 24839609 24840244 -174789906 + L1PA16 LINE L1 5512 6157 -9 25 65 0 0 chr5 24840244 24840290 -174789860 + AT_rich Low_complexity Low_complexity 1 46 0 24 0 0 0 chr5 24842228 24842252 -174787898 + AT_rich Low_complexity Low_complexity 1 24 0 408 331 140 0 chr5 24842349 24842485 -174787665 + MER52A LTR ERV1 670 824 -931 * 456 238 70 45 chr5 24842476 24842781 -174787369 + MER52A LTR ERV1 202 1232 -51 381 93 0 0 chr5 24844455 24844509 -174785641 + (TG)n Simple_repeat Simple_repeat 2 55 0 1564 184 13 33 chr5 24844953 24845257 -174784893 + AluJo SINE Alu 1 298 -14 24 0 0 0 chr5 24846865 24846889 -174783261 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr5 24847198 24847233 -174782917 + AT_rich Low_complexity Low_complexity 1 35 0 415 370 80 9 chr5 24847564 24847788 -174782362 - MIR SINE MIR -13 249 10 2496 71 0 0 chr5 24848134 24848444 -174781706 + AluY SINE Alu 1 310 -1 2262 109 3 0 chr5 24849393 24849697 -174780453 - AluSg SINE Alu -5 305 1 899 214 57 12 chr5 24850673 24850915 -174779235 + L1MA9 LINE L1 5452 5698 -470 639 230 27 4 chr5 24850922 24851083 -174779067 + L1M4 LINE L1 5643 5804 -370 24250 151 28 18 chr5 24851192 24857516 -174772634 + L1PA8A LINE L1 1 6446 0 2114 182 73 6 chr5 24857510 24857976 -174772174 + L1MA9 LINE L1 5814 6310 -2 * 198 222 0 0 chr5 24858274 24858328 -174771822 + (TA)n Simple_repeat Simple_repeat 1 54 0 25 0 0 0 chr5 24859119 24859144 -174771006 + AT_rich Low_complexity Low_complexity 1 25 0 317 367 58 60 chr5 24859532 24859963 -174770187 - L1ME LINE L1 -447 5723 5294 1108 193 79 73 chr5 24859963 24860331 -174769819 - L1MC3 LINE L1 0 8203 7834 6817 220 45 46 chr5 24860390 24861383 -174768767 - L1MC3 LINE L1 -494 7709 6717 2026 116 0 0 chr5 24861383 24861679 -174768471 + AluSc SINE Alu 3 298 0 6817 220 45 46 chr5 24861679 24863566 -174766584 - L1MC3 LINE L1 -1486 6717 4821 2010 131 6 10 chr5 24863622 24863935 -174766215 + AluSx SINE Alu 1 312 0 522 261 14 41 chr5 24863953 24864171 -174765979 - L1MC3 LINE L1 -2277 4287 4076 1156 211 5 33 chr5 24864171 24864536 -174765614 - LTR2 LTR ERV1 0 449 1 2930 254 117 25 chr5 24864536 24866358 -174763792 - L1MC3 LINE L1 -2485 4079 2426 2149 128 3 0 chr5 24866358 24866663 -174763487 + AluSx SINE Alu 1 306 -6 2930 254 117 25 chr5 24866663 24867903 -174762247 - L1MC3 LINE L1 -4138 2426 467 428 327 58 78 chr5 24868249 24868735 -174761415 - L1M4 LINE L1 -1994 4152 3677 22 35 0 0 chr5 24871111 24871140 -174759010 + AT_rich Low_complexity Low_complexity 1 29 0 31 26 0 0 chr5 24871317 24871355 -174758795 + AT_rich Low_complexity Low_complexity 1 38 0 236 197 0 30 chr5 24871377 24871443 -174758707 + (TATATG)n Simple_repeat Simple_repeat 4 67 0 1948 207 32 82 chr5 24872850 24873448 -174756702 - MLT2B3 LTR ERVL 0 520 1 2177 120 3 0 chr5 24873795 24874104 -174756046 - AluSx SINE Alu -2 310 1 31 26 0 0 chr5 24874746 24874784 -174755366 + AT_rich Low_complexity Low_complexity 1 38 0 2025 126 3 7 chr5 24874885 24875195 -174754955 - AluSc SINE Alu 0 309 1 267 31 0 0 chr5 24876047 24876079 -174754071 + (A)n Simple_repeat Simple_repeat 1 32 0 263 289 11 0 chr5 24876168 24876258 -174753892 - LTR67 LTR ERVL -9 548 458 21 36 0 0 chr5 24877201 24877229 -174752921 + AT_rich Low_complexity Low_complexity 1 28 0 1663 149 2 140 chr5 24877257 24877679 -174752471 + THE1B LTR MaLR 1 364 0 9973 131 7 28 chr5 24877679 24879293 -174750857 + THE1B-int LTR MaLR 1 1580 0 1139 159 24 19 chr5 24879293 24879501 -174750649 + THE1C LTR MaLR 1 209 -166 27 29 0 0 chr5 24880162 24880196 -174749954 + AT_rich Low_complexity Low_complexity 1 34 0 337 263 25 107 chr5 24881755 24881998 -174748152 - L2 LINE L2 -16 3297 3075 249 169 31 0 chr5 24882838 24882903 -174747247 + MER53 DNA DNA 95 161 -28 191 227 23 0 chr5 24883258 24883302 -174746848 - L2 LINE L2 0 3313 3269 235 161 0 36 chr5 24883426 24883482 -174746668 + MLT1C LTR MaLR 1 54 -336 613 300 46 23 chr5 24883523 24883783 -174746367 + MLT1C LTR MaLR 200 465 -2 21 57 0 0 chr5 24884047 24884082 -174746068 + AT_rich Low_complexity Low_complexity 1 35 0 426 53 0 0 chr5 24884976 24885033 -174745117 + (TG)n Simple_repeat Simple_repeat 2 58 0 222 343 15 0 chr5 24885104 24885171 -174744979 - MIR SINE MIR -184 78 11 27 29 0 0 chr5 24885762 24885796 -174744354 + AT_rich Low_complexity Low_complexity 1 34 0 300 102 0 0 chr5 24885873 24885922 -174744228 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 1926 97 0 0 chr5 24885922 24886189 -174743961 - L1PA8 LINE L1 -17 6155 5889 186 43 0 0 chr5 24887148 24887171 -174742979 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 5657 70 16 1 chr5 24887619 24888075 -174742075 - L1PA7 LINE L1 0 6154 5681 303 28 0 0 chr5 24888075 24888111 -174742039 + (CA)n Simple_repeat Simple_repeat 2 37 0 5657 70 16 1 chr5 24888111 24888397 -174741753 - L1PA7 LINE L1 -473 5681 5401 245 302 167 29 chr5 24888397 24888672 -174741478 - L2 LINE L2 -1165 2149 1837 1071 231 21 87 chr5 24888863 24889395 -174740755 - LTR5 LTR ERVK 0 969 473 23 54 0 0 chr5 24890026 24890063 -174740087 + AT_rich Low_complexity Low_complexity 1 37 0 876 226 136 31 chr5 24890388 24890843 -174739307 + MER114 LTR ERV 86 588 -60 472 15 31 0 chr5 24890912 24890977 -174739173 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 2228 108 0 0 chr5 24890978 24891275 -174738875 - AluSx SINE Alu -14 298 2 531 257 0 0 chr5 24891327 24891440 -174738710 + FLAM_A SINE Alu 6 118 -24 1092 247 123 72 chr5 24892204 24893202 -174736948 - Zaphod DNA AcHobo -350 3681 2633 553 147 6 159 chr5 24893202 24893365 -174736785 - MER1B DNA MER1_type 0 339 202 1172 268 100 33 chr5 24893399 24894066 -174736084 - Zaphod DNA AcHobo -1402 2629 1918 462 263 21 27 chr5 24894143 24894329 -174735821 - Zaphod DNA AcHobo -2890 1141 957 216 195 12 61 chr5 24894977 24895059 -174735091 + (TATATG)n Simple_repeat Simple_repeat 4 81 0 1075 276 77 85 chr5 24896303 24896878 -174733272 + MLT1G LTR MaLR 21 590 0 228 173 0 19 chr5 24897021 24897073 -174733077 + (CATA)n Simple_repeat Simple_repeat 2 52 0 2177 81 3 7 chr5 24897130 24897414 -174732736 - AluSp SINE Alu -30 283 1 1174 123 6 6 chr5 24897439 24897618 -174732532 - AluSx SINE Alu -133 179 1 260 138 35 35 chr5 24897618 24897676 -174732474 + MLT1F LTR MaLR 478 535 -7 1054 262 108 35 chr5 24897705 24898270 -174731880 - L1ME2 LINE L1 -251 6708 6103 440 308 73 57 chr5 24898394 24899587 -174730563 - L1ME2 LINE L1 -4580 2542 1140 260 317 59 30 chr5 24900033 24900235 -174729915 - L1ME2 LINE L1 -6063 360 153 3377 192 29 67 chr5 24900296 24901303 -174728847 + LTR5 LTR ERVK 1 969 0 499 118 0 0 chr5 24901305 24901381 -174728769 - tRNA-Lys-AAG tRNA tRNA 0 76 1 21 0 0 0 chr5 24901495 24901516 -174728634 + AT_rich Low_complexity Low_complexity 1 21 0 677 308 100 59 chr5 24902235 24903289 -174726861 - L1MC4 LINE L1 -18 8024 6928 231 316 66 7 chr5 24903288 24903440 -174726710 - L1ME3A LINE L1 -11 6159 5999 * 363 118 40 0 chr5 24904191 24904267 -174725883 + (TA)n Simple_repeat Simple_repeat 2 80 0 528 147 49 0 chr5 24904336 24904438 -174725712 - L1MA10 LINE L1 0 6334 6228 3745 199 30 56 chr5 24904438 24905128 -174725022 + L1MA10 LINE L1 4789 5496 -838 1893 117 0 0 chr5 24905128 24905392 -174724758 + AluSq SINE Alu 35 298 -15 3745 199 30 56 chr5 24905392 24905955 -174724195 + L1MA10 LINE L1 5496 6073 -261 1261 206 45 75 chr5 24905955 24906098 -174724052 + MLT1A1 LTR MaLR 1 147 -218 2067 83 14 0 chr5 24906098 24906226 -174723924 + AluY SINE Alu 1 126 -183 195 42 0 0 chr5 24906226 24906250 -174723900 + (TA)n Simple_repeat Simple_repeat 2 25 0 2067 83 14 0 chr5 24906250 24906426 -174723724 + AluY SINE Alu 126 309 0 1261 206 45 75 chr5 24906426 24906655 -174723495 + MLT1A1 LTR MaLR 147 363 -2 3745 199 30 56 chr5 24906655 24906744 -174723406 + L1MA10 LINE L1 6073 6163 -171 2288 98 0 7 chr5 24906744 24907050 -174723100 + AluSx SINE Alu 4 307 -5 189 0 0 0 chr5 24907052 24907073 -174723077 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 225 0 0 0 chr5 24907072 24907097 -174723053 + (CA)n Simple_repeat Simple_repeat 2 26 0 3745 199 30 56 chr5 24907073 24907198 -174722952 + L1MA10 LINE L1 6164 6207 -127 512 155 26 22 chr5 24907309 24907443 -174722707 + MSTA LTR MaLR 8 123 -252 23 0 0 0 chr5 24909601 24909624 -174720526 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 24910459 24910503 -174719647 + AT_rich Low_complexity Low_complexity 1 44 0 32 26 0 0 chr5 24910722 24910761 -174719389 + AT_rich Low_complexity Low_complexity 1 39 0 1993 120 39 0 chr5 24911071 24911354 -174718796 + AluSg SINE Alu 6 299 -11 206 227 0 0 chr5 24911391 24911435 -174718715 + (TATG)n Simple_repeat Simple_repeat 1 44 0 3632 201 11 18 chr5 24911505 24912357 -174717793 + L1 LINE L1 3321 4166 -1980 1612 249 45 66 chr5 25012361 25012875 -174617275 + MER77 LTR ERV1 101 603 -2 447 19 0 0 chr5 25013499 25013551 -174616599 + (TA)n Simple_repeat Simple_repeat 2 53 0 243 157 0 0 chr5 25013671 25013722 -174616428 - HSATII Satellite Satellite -119 51 1 1114 124 5 9 chr5 25013733 25015280 -174614870 - HSATII Satellite Satellite -1 1540 1 939 105 17 12 chr5 25015307 25016057 -174614093 - HSATII Satellite Satellite 0 754 1 512 323 5 0 chr5 25016133 25016350 -174613800 + L1M4 LINE L1 2351 2568 -3578 363 296 40 62 chr5 25016864 25017040 -174613110 + L1MEc LINE L1 1242 1413 -4983 818 259 51 13 chr5 25017080 25017454 -174612696 + L1MEc LINE L1 2319 2706 -3509 466 210 23 28 chr5 25017549 25017725 -174612425 + CT-rich Low_complexity Low_complexity 3 177 0 272 255 19 6 chr5 25017736 25017893 -174612257 + CT-rich Low_complexity Low_complexity 2 160 0 591 188 24 0 chr5 25017912 25018077 -174612073 + CT-rich Low_complexity Low_complexity 3 171 0 381 88 38 25 chr5 25018098 25018178 -174611972 + CT-rich Low_complexity Low_complexity 4 84 0 21 0 0 0 chr5 25018192 25018213 -174611937 + AT_rich Low_complexity Low_complexity 1 21 0 931 272 49 91 chr5 25018273 25018550 -174611600 + MLT1D LTR MaLR 5 253 -252 1999 134 7 0 chr5 25018550 25018841 -174611309 + AluY SINE Alu 7 299 -12 931 272 49 91 chr5 25018841 25019070 -174611080 + MLT1D LTR MaLR 253 490 -15 1583 207 7 3 chr5 25020070 25020370 -174609780 + AluJb SINE Alu 11 311 -1 1061 115 4 10 chr5 25020786 25021481 -174608669 - HSATII Satellite Satellite -50 691 1 1176 123 9 11 chr5 25021492 25023357 -174606793 - HSATII Satellite Satellite -3 1860 1 1053 130 5 0 chr5 25023403 25024216 -174605934 - HSATII Satellite Satellite -7 817 1 962 147 3 0 chr5 25024253 25024641 -174605509 - HSATII Satellite Satellite 0 388 1 905 124 9 13 chr5 25024667 25025140 -174605010 - HSATII Satellite Satellite -2 471 1 1059 121 1 16 chr5 25025153 25025885 -174604265 - HSATII Satellite Satellite -33 721 1 1143 85 26 13 chr5 25025922 25026378 -174603772 - HSATII Satellite Satellite 0 461 1 801 120 21 9 chr5 25026408 25026738 -174603412 - HSATII Satellite Satellite 0 334 1 962 121 4 17 chr5 25026838 25027551 -174602599 + HSATII Satellite Satellite 1 703 -1 1091 117 6 23 chr5 25027566 25028499 -174601651 + HSATII Satellite Satellite 1 916 0 186 143 0 0 chr5 25028536 25028571 -174601579 + HSATII Satellite Satellite 10 44 -126 1110 118 12 13 chr5 25028599 25029482 -174600668 + HSATII Satellite Satellite 1 881 0 539 141 70 0 chr5 25029498 25029640 -174600510 + HSATII Satellite Satellite 1 152 -18 767 111 0 21 chr5 25029657 25029801 -174600349 + HSATII Satellite Satellite 30 170 0 692 126 63 0 chr5 25029817 25029976 -174600174 + HSATII Satellite Satellite 1 169 -1 763 106 62 0 chr5 25030016 25030176 -174599974 + HSATII Satellite Satellite 1 170 0 989 130 9 13 chr5 25030198 25032872 -174597278 + HSATII Satellite Satellite 1 2662 0 1041 130 0 12 chr5 25032890 25033367 -174596783 + HSATII Satellite Satellite 1 471 0 1052 138 8 11 chr5 25033386 25035048 -174595102 + HSATII Satellite Satellite 1 1658 -39 857 115 0 19 chr5 25035064 25035220 -174594930 + HSATII Satellite Satellite 1 153 -17 851 160 11 0 chr5 25035247 25035517 -174594633 + HSATII Satellite Satellite 1 273 -93 950 116 1 14 chr5 25035535 25036442 -174593708 + HSATII Satellite Satellite 1 895 -35 1011 120 13 7 chr5 25036542 25037884 -174592266 + HSATII Satellite Satellite 1 1350 -92 993 131 9 11 chr5 25037901 25038741 -174591409 + HSATII Satellite Satellite 1 838 0 830 123 0 18 chr5 25038769 25038932 -174591218 + HSATII Satellite Satellite 7 166 -4 888 129 8 18 chr5 25038971 25040135 -174590015 + HSATII Satellite Satellite 1 1152 -35 853 114 0 34 chr5 25040148 25040323 -174589827 + HSATII Satellite Satellite 2 170 0 892 120 31 23 chr5 25040348 25040613 -174589537 + HSATII Satellite Satellite 1 267 -27 994 122 14 17 chr5 25040640 25041171 -174588979 + HSATII Satellite Satellite 1 529 -9 1089 117 9 9 chr5 25041206 25041523 -174588627 + HSATII Satellite Satellite 1 317 0 647 89 57 0 chr5 25041535 25041659 -174588491 + HSATII Satellite Satellite 20 150 -20 1324 153 3 1 chr5 25041761 25050716 -174579434 + ALR/Alpha Satellite centromeric 1 8972 -50 1106 115 4 11 chr5 25050816 25051907 -174578243 + HSATII Satellite Satellite 1 1083 0 972 114 0 0 chr5 25051936 25052103 -174578047 + HSATII Satellite Satellite 4 170 0 1089 115 0 4 chr5 25052130 25052784 -174577366 + HSATII Satellite Satellite 1 651 -116 1068 123 18 13 chr5 25052802 25054484 -174575666 + HSATII Satellite Satellite 1 1690 0 1097 112 0 13 chr5 25054510 25055893 -174574257 + HSATII Satellite Satellite 1 1365 -7 447 215 0 0 chr5 25055876 25055997 -174574153 + (CACTC)n Simple_repeat Simple_repeat 4 124 0 * 498 70 0 0 chr5 25056076 25056147 -174574003 + (CATTC)n Simple_repeat Simple_repeat 5 75 0 1144 160 5 1 chr5 25056524 25065594 -174564556 + ALR/Alpha Satellite centromeric 1 9109 -36 603 147 4 35 chr5 25065607 25065875 -174564275 - HSATII Satellite Satellite -50 259 1 825 113 18 18 chr5 25065890 25066058 -174564092 - HSATII Satellite Satellite -1 169 2 881 124 12 20 chr5 25066069 25066825 -174563325 - HSATII Satellite Satellite -1 749 1 1034 99 0 17 chr5 25066852 25067024 -174563126 - HSATII Satellite Satellite -1 169 1 1032 146 16 2 chr5 25067063 25068375 -174561775 - HSATII Satellite Satellite 0 1329 1 981 118 2 19 chr5 25068412 25069280 -174560870 - HSATII Satellite Satellite -1 853 1 587 164 21 0 chr5 25069300 25069440 -174560710 - HSATII Satellite Satellite -27 143 1 804 134 23 15 chr5 25069467 25069868 -174560282 - HSATII Satellite Satellite -1 404 1 1197 117 9 12 chr5 25069891 25073614 -174556536 - HSATII Satellite Satellite -39 3709 1 1065 131 8 3 chr5 25073635 25074725 -174555425 - HSATII Satellite Satellite 0 1096 1 1074 133 5 4 chr5 25074741 25076085 -174554065 - HSATII Satellite Satellite -121 1345 1 871 136 8 15 chr5 25076120 25076605 -174553545 - HSATII Satellite Satellite -50 481 1 830 140 6 11 chr5 25076619 25076958 -174553192 - HSATII Satellite Satellite -98 337 1 870 124 0 0 chr5 25076986 25077139 -174553011 - HSATII Satellite Satellite -2 168 16 1011 125 1 12 chr5 25077154 25077880 -174552270 - HSATII Satellite Satellite -1 717 1 758 126 20 0 chr5 25077906 25078057 -174552093 - HSATII Satellite Satellite 0 170 17 795 151 0 0 chr5 25078073 25078232 -174551918 - HSATII Satellite Satellite -7 163 5 923 105 0 8 chr5 25078266 25078616 -174551534 - HSATII Satellite Satellite -14 347 1 1064 105 4 8 chr5 25078643 25079364 -174550786 - HSATII Satellite Satellite -77 718 1 803 107 21 0 chr5 25079376 25079516 -174550634 - HSATII Satellite Satellite -27 143 1 1122 129 5 4 chr5 25079535 25081762 -174548388 - HSATII Satellite Satellite 0 2228 1 943 115 3 16 chr5 25081788 25082161 -174547989 - HSATII Satellite Satellite -8 368 1 921 117 10 18 chr5 25082203 25083067 -174547083 - HSATII Satellite Satellite -3 857 1 950 102 17 0 chr5 25083113 25083467 -174546683 - HSATII Satellite Satellite 0 360 1 713 123 0 36 chr5 25083483 25083745 -174546405 - HSATII Satellite Satellite -1 252 1 34734 29 0 1 chr5 25083845 25088813 -174541337 + L1HS LINE L1 1191 6154 -1 1109 163 4 1 chr5 25088829 25098975 -174531175 + ALR/Alpha Satellite centromeric 1 10176 0 1945 62 3 7 chr5 25099080 25100109 -174530041 - L1P LINE L1 -4990 1156 4 312 212 15 0 chr5 25100109 25100175 -174529975 + ALR/Alpha Satellite centromeric 72 138 -33 1144 159 4 1 chr5 25100281 25104330 -174525820 + ALR/Alpha Satellite centromeric 1 4064 -32 1119 155 3 0 chr5 25104441 25106270 -174523880 - ALR/Alpha Satellite centromeric 0 1833 1 2148 128 74 12 chr5 25106371 25106708 -174523442 + THE1B LTR MaLR 7 364 0 1398 248 46 10 chr5 25106746 25107161 -174522989 + MER54A LTR ERVL 472 901 0 285 273 26 19 chr5 25108105 25108259 -174521891 + (TA)n Simple_repeat Simple_repeat 1 155 0 21 0 0 0 chr5 25108409 25108430 -174521720 + AT_rich Low_complexity Low_complexity 1 21 0 2225 189 104 11 chr5 25108993 25109533 -174520617 + LTR49 LTR ERV1 1 590 -5 1814 181 47 19 chr5 25109725 25110150 -174520000 + LTR56 LTR ERV1 9 445 0 505 243 138 11 chr5 25110289 25110478 -174519672 - MER20 DNA MER1_type -3 216 4 25 31 0 0 chr5 25110730 25110762 -174519388 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 25110977 25111005 -174519145 + AT_rich Low_complexity Low_complexity 1 28 0 3072 45 3 0 chr5 25111183 25111562 -174518588 + L1PA2 LINE L1 5770 6149 -6 651 191 30 0 chr5 25112708 25112839 -174517311 + MSTB1 LTR MaLR 1 135 -297 234 270 86 39 chr5 25112920 25113257 -174516893 - L1ME LINE L1 -4983 1222 870 367 330 73 53 chr5 25113261 25113618 -174516532 - L1ME LINE L1 -5487 909 546 1226 164 4 4 chr5 25113727 25113953 -174516197 - L1MB3 LINE L1 -1 6182 5957 377 363 63 9 chr5 25115548 25115836 -174514314 + L2 LINE L2 2748 3047 -266 2404 220 35 8 chr5 25115909 25116501 -174513649 - L1MB7 LINE L1 -16 6168 5561 4172 267 68 19 chr5 25116516 25118313 -174511837 - L1MB7 LINE L1 -729 5445 3565 28 0 0 0 chr5 25118322 25118350 -174511800 + AT_rich Low_complexity Low_complexity 1 28 0 572 257 139 32 chr5 25118484 25118758 -174511392 + MER77 LTR ERV1 323 599 -6 1600 223 18 0 chr5 25119390 25119731 -174510419 - MER7A DNA MER2_type 0 346 2 25 31 0 0 chr5 25119783 25119815 -174510335 + AT_rich Low_complexity Low_complexity 1 32 0 264 231 0 51 chr5 25120008 25120086 -174510064 + (TATG)n Simple_repeat Simple_repeat 3 76 0 21 36 0 0 chr5 25121009 25121037 -174509113 + AT_rich Low_complexity Low_complexity 1 28 0 985 126 8 20 chr5 25121217 25121941 -174508209 - HSATII Satellite Satellite 0 715 1 1020 127 8 5 chr5 25121968 25123232 -174506918 - HSATII Satellite Satellite 0 1268 1 1023 126 8 8 chr5 25123254 25125557 -174504593 - HSATII Satellite Satellite -23 2303 1 211 165 70 9 chr5 25125557 25125672 -174504478 + (CGAAT)n Simple_repeat Simple_repeat 4 125 0 918 141 5 4 chr5 25125676 25126314 -174503836 - HSATII Satellite Satellite -7 638 1 616 122 0 40 chr5 25126431 25126579 -174503571 - HSATII Satellite Satellite -28 142 1 849 91 15 15 chr5 25126639 25126842 -174503308 - HSATII Satellite Satellite -1 203 1 507 95 0 0 chr5 25126854 25126928 -174503222 - HSATII Satellite Satellite -76 94 21 1036 129 25 4 chr5 25126948 25127666 -174502484 - HSATII Satellite Satellite -7 733 1 651 170 0 0 chr5 25127702 25127855 -174502295 - HSATII Satellite Satellite 0 170 18 1220 100 26 11 chr5 25127873 25128416 -174501734 - HSATII Satellite Satellite 0 551 1 944 121 16 19 chr5 25128439 25129238 -174500912 - HSATII Satellite Satellite -23 796 1 797 133 14 14 chr5 25129340 25129771 -174500379 - HSATII Satellite Satellite 0 431 1 1032 124 6 3 chr5 25129789 25130821 -174499329 - HSATII Satellite Satellite 0 1035 1 945 130 9 0 chr5 25130834 25131138 -174499012 - HSATII Satellite Satellite 0 306 1 888 136 23 9 chr5 25131150 25131774 -174498376 - HSATII Satellite Satellite 0 632 1 1121 120 8 6 chr5 25131797 25133724 -174496426 - HSATII Satellite Satellite -1 1930 1 1023 139 4 8 chr5 25133747 25134502 -174495648 - HSATII Satellite Satellite -51 752 1 182 119 48 0 chr5 25134508 25134550 -174495600 + (GAATG)n Satellite Satellite 2 45 0 1061 108 0 5 chr5 25134560 25134767 -174495383 - HSATII Satellite Satellite 0 205 1 1002 126 11 15 chr5 25134796 25136408 -174493742 - HSATII Satellite Satellite -125 1605 1 595 346 3 3 chr5 25136483 25136798 -174493352 + L1M4 LINE L1 2349 2663 -3483 1963 227 40 71 chr5 25137942 25138564 -174491586 - MER77 LTR ERV1 -2 603 1 21 36 0 0 chr5 25138573 25138601 -174491549 + AT_rich Low_complexity Low_complexity 1 28 0 1086 128 11 8 chr5 25138758 25141928 -174488222 - HSATII Satellite Satellite -100 3180 1 983 103 9 13 chr5 25141939 25142403 -174487747 - HSATII Satellite Satellite -22 462 1 974 130 3 19 chr5 25142428 25144935 -174485215 - HSATII Satellite Satellite -21 2465 1 1041 112 10 19 chr5 25144954 25146036 -174484114 - HSATII Satellite Satellite -1 1071 1 895 103 0 34 chr5 25146059 25146234 -174483916 - HSATII Satellite Satellite -1 169 1 821 129 13 17 chr5 25146287 25146804 -174483346 - HSATII Satellite Satellite 0 514 1 962 132 12 0 chr5 25146853 25147314 -174482836 - HSATII Satellite Satellite 0 466 1 1131 104 13 8 chr5 25147330 25148749 -174481401 - HSATII Satellite Satellite -53 1425 1 1406 229 7 7 chr5 25149062 25149355 -174480795 + MLT1A1 LTR MaLR 73 365 0 280 276 21 35 chr5 25149590 25149735 -174480415 + L1MCa LINE L1 1253 1395 -5031 767 271 42 13 chr5 25149804 25150181 -174479969 + L1MCa LINE L1 2530 2917 -3509 578 209 19 9 chr5 25150275 25150918 -174479232 + CT-rich Low_complexity Low_complexity 1 648 0 21 0 0 0 chr5 25150933 25150954 -174479196 + AT_rich Low_complexity Low_complexity 1 21 0 1059 250 50 83 chr5 25151014 25151287 -174478863 + MLT1D LTR MaLR 5 255 -250 1871 143 7 7 chr5 25151287 25151581 -174478569 + AluSc SINE Alu 3 296 -13 1059 250 50 83 chr5 25151581 25151823 -174478327 + MLT1D LTR MaLR 255 503 -2 1426 227 4 4 chr5 25152816 25153094 -174477056 + AluJb SINE Alu 11 288 -24 22 0 0 0 chr5 25153094 25153116 -174477034 + AT_rich Low_complexity Low_complexity 1 22 0 1486 220 52 3 chr5 25154286 25154672 -174475478 + MER54A LTR ERVL 8 412 -489 2141 121 74 15 chr5 25154681 25155019 -174475131 + THE1B LTR MaLR 7 364 0 1257 256 48 10 chr5 25155057 25155471 -174474679 + MER54A LTR ERVL 472 901 0 279 267 20 27 chr5 25156416 25156562 -174473588 + (TA)n Simple_repeat Simple_repeat 1 145 0 25 31 0 0 chr5 25156713 25156745 -174473405 + AT_rich Low_complexity Low_complexity 1 32 0 2174 192 100 11 chr5 25157332 25157874 -174472276 + LTR49 LTR ERV1 1 590 -5 1822 177 51 19 chr5 25158062 25158492 -174471658 + LTR56 LTR ERV1 1 444 -1 347 229 12 0 chr5 25158633 25158716 -174471434 - MER20 DNA MER1_type -3 216 133 25 31 0 0 chr5 25159167 25159199 -174470951 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr5 25159403 25159442 -174470708 + AT_rich Low_complexity Low_complexity 1 39 0 1575 178 84 55 chr5 25159893 25159925 -174470225 + LTR49 LTR ERV1 1 31 -564 1909 133 7 4 chr5 25159925 25160203 -174469947 - AluSq SINE Alu -21 292 14 1575 178 84 55 chr5 25160203 25160585 -174469565 + LTR49 LTR ERV1 31 427 -168 211 148 16 16 chr5 25160619 25160680 -174469470 + (TA)n Simple_repeat Simple_repeat 1 61 0 254 253 44 0 chr5 25160680 25160771 -174469379 + LTR48 LTR ERV1 645 739 -48 26 64 0 0 chr5 25160905 25160952 -174469198 + AT_rich Low_complexity Low_complexity 1 47 0 706 156 31 0 chr5 25162185 25162313 -174467837 + MSTB1 LTR MaLR 1 132 -300 246 266 108 54 chr5 25162398 25162733 -174467417 - L1ME LINE L1 -4983 1222 870 320 346 64 55 chr5 25162737 25163098 -174467052 - L1ME LINE L1 -5487 909 546 1141 183 22 4 chr5 25163207 25163437 -174466713 - L1MB3 LINE L1 -1 6182 5949 286 269 65 106 chr5 25164763 25165008 -174465142 - L3 LINE CR1 -583 994 760 396 342 78 22 chr5 25165029 25165382 -174464768 + L2 LINE L2 2748 3123 -190 2353 217 53 7 chr5 25165389 25165969 -174464181 - L1MB7 LINE L1 -16 6168 5562 4041 270 73 20 chr5 25165985 25167771 -174462379 - L1MB7 LINE L1 -729 5445 3565 31 0 0 0 chr5 25167776 25167807 -174462343 + AT_rich Low_complexity Low_complexity 1 31 0 585 262 128 49 chr5 25167939 25168213 -174461937 + MER77 LTR ERV1 323 599 -6 1587 223 18 0 chr5 25168846 25169187 -174460963 - MER7A DNA MER2_type 0 346 2 26 30 0 0 chr5 25169238 25169271 -174460879 + AT_rich Low_complexity Low_complexity 1 33 0 303 265 0 24 chr5 25169458 25169541 -174460609 + (TATG)n Simple_repeat Simple_repeat 3 83 0 21 36 0 0 chr5 25170462 25170490 -174459660 + AT_rich Low_complexity Low_complexity 1 28 0 734 140 5 0 chr5 25170670 25170871 -174459279 - HSATII Satellite Satellite -13 202 1 962 131 0 9 chr5 25170899 25171221 -174458929 - HSATII Satellite Satellite -1 319 1 663 123 41 0 chr5 25171248 25171394 -174458756 - HSATII Satellite Satellite -1 169 18 1058 133 11 5 chr5 25171414 25172684 -174457466 - HSATII Satellite Satellite 0 1277 1 899 133 12 9 chr5 25172704 25173046 -174457104 - HSATII Satellite Satellite -1 343 1 739 147 13 13 chr5 25173059 25173294 -174456856 - HSATII Satellite Satellite 0 235 1 912 135 7 7 chr5 25173317 25174463 -174455687 - HSATII Satellite Satellite 0 1146 1 1016 119 6 17 chr5 25174496 25175212 -174454938 - HSATII Satellite Satellite -76 708 1 1065 113 0 0 chr5 25175231 25175544 -174454606 - HSATII Satellite Satellite -1 313 1 938 140 0 19 chr5 25175579 25175900 -174454250 - HSATII Satellite Satellite -23 315 1 214 118 0 59 chr5 25175910 25175978 -174454172 + (GAATG)n Satellite Satellite 2 65 0 866 118 12 17 chr5 25175978 25176499 -174453651 - HSATII Satellite Satellite 0 518 1 931 99 26 8 chr5 25176544 25176907 -174453243 - HSATII Satellite Satellite -1 369 1 844 113 17 12 chr5 25176925 25177172 -174452978 - HSATII Satellite Satellite -49 248 1 775 106 21 0 chr5 25177183 25177324 -174452826 - HSATII Satellite Satellite -18 152 9 3679 182 18 36 chr5 25277377 25278162 -174351988 - L1 LINE L1 -1862 4284 3514 419 278 57 36 chr5 25278216 25278464 -174351686 - L1ME3A LINE L1 -30 6140 5888 682 263 110 32 chr5 25278503 25278896 -174351254 - L1M3 LINE L1 -411 5751 5368 235 348 18 0 chr5 25278882 25279046 -174351104 - L1ME3A LINE L1 -728 5434 5268 * 260 209 134 0 chr5 25279241 25279308 -174350842 - MLT1G1 LTR MaLR -31 564 489 288 294 7 85 chr5 25279507 25279660 -174350490 - MLT1H LTR MaLR -342 207 67 367 262 46 46 chr5 25279894 25280157 -174349993 - L1ME3A LINE L1 -1302 4844 4582 1274 236 4 7 chr5 25280260 25280536 -174349614 - AluJo SINE Alu -37 275 1 293 238 119 31 chr5 25280650 25280810 -174349340 - L1M3 LINE L1 -1880 4266 4093 1203 256 87 76 chr5 25281142 25281810 -174348340 - L1MD2 LINE L1 -16 6343 5669 1836 151 39 36 chr5 25282996 25283360 -174346790 - MER47A DNA MER2_type 0 366 2 2236 199 34 2 chr5 25283586 25284054 -174346096 - MER52A LTR ERV1 -1 1754 1272 3847 126 62 101 chr5 25284054 25285038 -174345112 + pTR5 LTR ERV1 797 2021 -417 283 224 31 20 chr5 25285042 25285140 -174345010 + LTR30 LTR ERV1 544 642 -80 1466 101 5 5 chr5 25285143 25285360 -174344790 + pTR5 LTR ERV1 172 388 -2050 3820 217 115 17 chr5 25285360 25286255 -174343895 - MER52A LTR ERV1 -413 1342 360 486 253 188 6 chr5 25286243 25286413 -174343737 - MER52A LTR ERV1 -1554 201 1 * 199 320 0 0 chr5 25286429 25286479 -174343671 - L2 LINE L2 -6 3266 3217 2313 91 3 0 chr5 25286534 25286842 -174343308 + AluY SINE Alu 1 309 -2 233 239 11 125 chr5 25286992 25287168 -174342982 - L2 LINE L2 -1369 1945 1790 1038 213 15 56 chr5 25287347 25287615 -174342535 - AluJb SINE Alu -11 301 45 324 314 21 64 chr5 25289056 25289244 -174340906 - L2 LINE L2 -17 3296 3117 21 36 0 0 chr5 25289715 25289743 -174340407 + AT_rich Low_complexity Low_complexity 1 28 0 267 140 0 0 chr5 25290228 25290278 -174339872 + (TG)n Simple_repeat Simple_repeat 1 50 0 1846 139 17 0 chr5 25292053 25292340 -174337810 - AluSx SINE Alu -20 292 1 294 29 0 0 chr5 25292735 25292770 -174337380 + (TG)n Simple_repeat Simple_repeat 2 36 0 * 393 22 0 0 chr5 25292769 25292815 -174337335 + (TA)n Simple_repeat Simple_repeat 1 46 0 1984 131 3 0 chr5 25292829 25293119 -174337031 - AluSx SINE Alu -21 291 1 307 54 0 0 chr5 25293147 25293184 -174336966 - L1P LINE L1 -1895 4251 4215 3495 19 0 9 chr5 25293184 25293603 -174336547 + L1PA2 LINE L1 5737 6153 -2 22 35 0 0 chr5 25293651 25293680 -174336470 + AT_rich Low_complexity Low_complexity 1 29 0 195 146 0 0 chr5 25294237 25294278 -174335872 + (TG)n Simple_repeat Simple_repeat 2 42 0 309 361 101 27 chr5 25295286 25295865 -174334285 - L2 LINE L2 0 3313 2653 1617 188 3 29 chr5 25296453 25296761 -174333389 + AluJb SINE Alu 3 302 -10 28 48 0 0 chr5 25296894 25296936 -174333214 + AT_rich Low_complexity Low_complexity 1 42 0 2101 148 8 78 chr5 25296946 25297380 -174332770 - L1MA7 LINE L1 -18 6273 5810 1639 167 159 8 chr5 25297380 25297752 -174332398 - MSTA LTR MaLR 0 428 1 8718 152 19 36 chr5 25297752 25299357 -174330793 - MSTA-int LTR MaLR 0 1580 3 1877 154 133 13 chr5 25299358 25299740 -174330410 - MSTA LTR MaLR 0 428 1 2101 148 8 78 chr5 25299740 25299776 -174330374 - L1MA7 LINE L1 -421 5870 5833 246 175 48 0 chr5 25299776 25299839 -174330311 + L1MA7 LINE L1 5767 5832 -459 2067 140 48 28 chr5 25300928 25301285 -174328865 - THE1B LTR MaLR 0 364 1 1862 197 112 14 chr5 25301583 25302019 -174328131 + MLT1D LTR MaLR 27 505 0 225 65 0 0 chr5 25302212 25302243 -174327907 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1767 152 0 0 chr5 25302256 25302519 -174327631 - AluSx SINE Alu -41 271 9 2218 114 7 0 chr5 25302702 25303000 -174327150 + AluSc SINE Alu 1 300 -9 368 342 74 19 chr5 25303007 25303222 -174326928 + MIR SINE MIR 15 243 -19 27 62 0 0 chr5 25303252 25303300 -174326850 + AT_rich Low_complexity Low_complexity 1 48 0 1696 197 28 28 chr5 25303664 25304054 -174326096 - MLT1B LTR MaLR 0 390 1 294 29 0 0 chr5 25304486 25304521 -174325629 + (TG)n Simple_repeat Simple_repeat 2 36 0 265 273 66 71 chr5 25304525 25304708 -174325442 + L2 LINE L2 2684 2865 -449 309 51 0 0 chr5 25305461 25305500 -174324650 + (TA)n Simple_repeat Simple_repeat 1 39 0 1540 203 36 36 chr5 25305850 25306240 -174323910 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr5 25306346 25306367 -174323783 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 25306809 25306844 -174323306 + AT_rich Low_complexity Low_complexity 1 35 0 2158 104 0 23 chr5 25306954 25307263 -174322887 - AluSx SINE Alu -10 302 1 28 105 0 0 chr5 25308177 25308282 -174321868 + AT_rich Low_complexity Low_complexity 1 105 0 247 345 48 44 chr5 25309357 25309586 -174320564 - L1MC5 LINE L1 -64 7897 7668 187 356 127 50 chr5 25310056 25310631 -174319519 + L2 LINE L2 2356 2974 -340 1298 190 11 144 chr5 25310841 25311314 -174318836 - MLT2D LTR ERVL 0 414 5 29 78 0 0 chr5 25311793 25311857 -174318293 + AT_rich Low_complexity Low_complexity 1 64 0 2119 68 0 0 chr5 25311993 25312257 -174317893 + AluY SINE Alu 1 264 -47 11179 200 43 13 chr5 25312799 25315848 -174314302 - L1MA4A LINE L1 -10 7355 4146 216 0 0 0 chr5 25315848 25315872 -174314278 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 11179 200 43 13 chr5 25315872 25316771 -174313379 - L1MA4A LINE L1 -3219 4146 3275 25 0 0 0 chr5 25317008 25317033 -174313117 + AT_rich Low_complexity Low_complexity 1 25 0 204 40 0 0 chr5 25317190 25317215 -174312935 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 9246 146 40 8 chr5 25317216 25317681 -174312469 - L1PA10 LINE L1 -22 6461 6012 1698 179 3 17 chr5 25317681 25317982 -174312168 - AluSx SINE Alu -15 297 1 9246 146 40 8 chr5 25317982 25319104 -174311046 - L1PA10 LINE L1 -471 6012 4768 207 0 0 0 chr5 25319104 25319127 -174311023 + (TTA)n Simple_repeat Simple_repeat 2 24 0 9246 146 40 8 chr5 25319127 25319910 -174310240 - L1PA10 LINE L1 -1715 4768 4012 7163 205 14 11 chr5 25319903 25321460 -174308690 - L1PA10 LINE L1 -3562 2899 1338 * 1148 73 0 0 chr5 25321474 25321648 -174308502 - AluSc SINE Alu 0 319 146 5208 226 28 21 chr5 25321655 25322957 -174307193 - L1PA10 LINE L1 -4735 1140 1 378 191 2 0 chr5 25322960 25323048 -174307102 - L1MA4A LINE L1 -3928 3280 3192 1568 175 57 33 chr5 25323048 25323414 -174306736 + THE1C LTR MaLR 1 375 0 4685 157 68 48 chr5 25323416 25324377 -174305773 + THE1C-int LTR MaLR 3 982 -598 889 94 8 24 chr5 25324377 25324504 -174305646 + THE1C-int LTR MaLR 1203 1327 -253 1984 134 0 3 chr5 25324529 25324819 -174305331 - AluSc SINE Alu -19 290 2 1576 119 26 22 chr5 25324821 25325089 -174305061 + THE1C-int LTR MaLR 1312 1580 0 1448 157 106 40 chr5 25325089 25325439 -174304711 + THE1C LTR MaLR 1 373 -2 5939 251 97 30 chr5 25325441 25328240 -174301910 - L1MA4A LINE L1 -4013 3196 174 915 119 143 6 chr5 25328259 25328427 -174301723 + THE1B LTR MaLR 1 191 -173 328 289 91 47 chr5 25328828 25329081 -174301069 - L2 LINE L2 0 3313 3050 34 42 0 0 chr5 25329237 25329285 -174300865 + AT_rich Low_complexity Low_complexity 1 48 0 1516 152 31 66 chr5 25329778 25330090 -174300060 + AluJb SINE Alu 6 307 0 432 339 70 26 chr5 25330272 25330658 -174299492 + MLT1L LTR MaLR 213 615 0 2011 117 7 23 chr5 25331630 25331937 -174298213 - AluSq SINE Alu -1 312 11 3259 269 89 35 chr5 25331944 25333129 -174297021 + MSTD-int LTR MaLR 470 1718 -17 818 213 94 1 chr5 25333144 25333471 -174296679 + MSTD LTR MaLR 6 396 0 3546 78 0 2 chr5 25334386 25334859 -174295291 - L1PA8 LINE L1 0 6172 5701 276 271 62 42 chr5 25335063 25335159 -174294991 - MLT1J1 LTR MaLR -243 203 106 222 217 28 49 chr5 25335295 25335438 -174294712 + (TAA)n Simple_repeat Simple_repeat 1 140 0 1931 164 0 0 chr5 25335968 25336267 -174293883 - AluSx SINE Alu -13 299 1 21 0 0 0 chr5 25336277 25336298 -174293852 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 25337218 25337247 -174292903 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 25337792 25337820 -174292330 + AT_rich Low_complexity Low_complexity 1 28 0 2611 51 0 0 chr5 25338129 25338440 -174291710 - AluY SINE Alu 0 311 1 28 0 0 0 chr5 25338640 25338668 -174291482 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 25339615 25339647 -174290503 + AT_rich Low_complexity Low_complexity 1 32 0 2143 141 0 0 chr5 25339653 25339965 -174290185 - AluSx SINE Alu 0 312 1 1980 164 26 65 chr5 25340060 25340522 -174289628 + MER65A LTR ERV1 1 444 -1 636 171 20 7 chr5 25340541 25340693 -174289457 + L1MA4A LINE L1 6149 6302 -1 3879 240 55 43 chr5 25340693 25341749 -174288401 + MLT1A1-int LTR MaLR 667 1735 0 846 215 42 67 chr5 25341750 25342133 -174288017 + MLT1A1 LTR MaLR 2 421 -7 28 71 0 0 chr5 25342996 25343052 -174287098 + AT_rich Low_complexity Low_complexity 1 56 0 388 164 51 34 chr5 25343079 25343256 -174286894 + (TA)n Simple_repeat Simple_repeat 1 180 0 352 124 38 97 chr5 25343316 25343501 -174286649 + (TATAA)n Simple_repeat Simple_repeat 4 177 0 275 118 11 43 chr5 25343515 25343608 -174286542 + (TAA)n Simple_repeat Simple_repeat 3 92 0 220 163 31 51 chr5 25343612 25343710 -174286440 + (TA)n Simple_repeat Simple_repeat 1 96 0 221 163 20 0 chr5 25345163 25345212 -174284938 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 388 359 67 24 chr5 25345429 25345727 -174284423 + L1ME4a LINE L1 5508 5818 -303 1126 178 0 35 chr5 25346039 25346241 -174283909 + MER1B DNA MER1_type 1 195 -102 487 267 103 6 chr5 25346468 25346633 -174283517 + MER5A DNA MER1_type 3 183 -6 1966 158 135 5 chr5 25347289 25347668 -174282482 - MSTA LTR MaLR 0 428 1 301 330 30 46 chr5 25347916 25348113 -174282037 - L2 LINE L2 -1344 1970 1777 290 282 77 0 chr5 25348171 25348288 -174281862 + L1ME4a LINE L1 5994 6119 -2 696 270 15 20 chr5 25349025 25349225 -174280925 - MER3 DNA MER1_type 0 209 11 2019 182 26 44 chr5 25351491 25351919 -174278231 - MSTB LTR MaLR -2 424 5 305 329 102 27 chr5 25352576 25352947 -174277203 + L1MEc LINE L1 953 1351 -5212 238 299 76 25 chr5 25353024 25353181 -174276969 + L1MEc LINE L1 1265 1429 -4955 1171 236 134 52 chr5 25353183 25353644 -174276506 - MLT1D LTR MaLR -6 499 1 511 300 100 30 chr5 25353658 25354028 -174276122 + L1MEc LINE L1 1540 1935 -4447 290 292 67 11 chr5 25355215 25355393 -174274757 + L1MEc LINE L1 2584 2771 -3611 7462 36 1 0 chr5 25355467 25356519 -174273631 + L1PA4 LINE L1 5100 6152 -3 336 134 25 168 chr5 25356532 25356651 -174273499 + L1ME LINE L1 5620 5721 -449 24 32 0 0 chr5 25356808 25356839 -174273311 + AT_rich Low_complexity Low_complexity 1 31 0 409 283 22 36 chr5 25356862 25357085 -174273065 + L1MEc LINE L1 2861 3080 -3302 289 135 58 0 chr5 25357088 25357140 -174273010 - MLT2A2 LTR ERVL 0 444 390 259 98 106 0 chr5 25357146 25357278 -174272872 + (TA)n Simple_repeat Simple_repeat 1 146 0 225 186 0 0 chr5 25357357 25357427 -174272723 + (TA)n Simple_repeat Simple_repeat 2 71 0 2786 117 25 0 chr5 25357435 25357838 -174272312 - MLT2A2 LTR ERVL -40 413 1 35000 108 10 8 chr5 25357838 25363547 -174266603 - ERVL-A2-A2 LTR ERVL 0 5654 2 2960 120 20 2 chr5 25363550 25363993 -174266157 - MLT2A2 LTR ERVL -2 451 1 598 263 74 29 chr5 25364214 25364457 -174265693 + L1MCa LINE L1 1327 1580 -4846 21 0 0 0 chr5 25364899 25364920 -174265230 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 25365924 25365946 -174264204 + AT_rich Low_complexity Low_complexity 1 22 0 405 300 72 22 chr5 25366262 25366485 -174263665 - L1M4 LINE L1 -790 5356 5123 270 334 30 25 chr5 25366571 25366936 -174263214 - L1M4 LINE L1 -1159 4987 4621 659 311 53 6 chr5 25367463 25367673 -174262477 - L1ME3 LINE L1 -120 6042 5810 258 32 0 0 chr5 25367673 25367704 -174262446 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 659 311 53 6 chr5 25367704 25367815 -174262335 - L1ME3 LINE L1 -352 5810 5706 21 0 0 0 chr5 25367973 25367994 -174262156 + AT_rich Low_complexity Low_complexity 1 21 0 2172 159 19 5 chr5 25368486 25368856 -174261294 + THE1C LTR MaLR 1 375 0 9367 142 40 7 chr5 25368857 25370386 -174259764 + THE1C-int LTR MaLR 2 1580 0 2315 148 14 5 chr5 25370387 25370758 -174259392 + THE1C LTR MaLR 2 375 0 423 274 28 65 chr5 25370923 25371171 -174258979 - L1ME1 LINE L1 -15 6220 5982 1068 271 96 11 chr5 25371227 25371874 -174258276 - L1ME1 LINE L1 -356 5879 5176 * 1555 280 51 17 chr5 25371846 25373021 -174257129 - L1ME1 LINE L1 -2980 3235 2058 1831 164 0 0 chr5 25373031 25373306 -174256844 + AluSx SINE Alu 1 275 -37 5684 163 60 12 chr5 25373635 25374741 -174255409 + Tigger3b DNA MER2_type 1 1159 -72 6536 214 135 14 chr5 25374744 25376308 -174253842 - MER52A LTR ERV1 0 1755 3 391 253 25 0 chr5 25376308 25376383 -174253767 + Tigger3b DNA MER2_type 1165 1241 0 542 308 75 48 chr5 25376466 25376904 -174253246 - L1ME3 LINE L1 -455 5707 5258 907 170 64 148 chr5 25377008 25377338 -174252812 + AluJb SINE Alu 1 302 0 2062 130 36 0 chr5 25378401 25378702 -174251448 - AluSx SINE Alu 0 312 1 42 73 0 24 chr5 25378946 25379070 -174251080 + AT_rich Low_complexity Low_complexity 1 121 0 226 315 136 19 chr5 25381339 25381552 -174248598 - LTR33 LTR ERVL 0 521 284 364 359 57 26 chr5 25382173 25382630 -174247520 - ERVL LTR ERVL -570 5194 4724 268 279 33 49 chr5 25382732 25382854 -174247296 - ERVL LTR ERVL -928 4557 4438 702 331 18 6 chr5 25382917 25383248 -174246902 - ERVL LTR ERVL -1190 4296 3953 186 143 0 0 chr5 25383756 25383791 -174246359 + (TA)n Simple_repeat Simple_repeat 2 36 0 2675 302 46 48 chr5 25383806 25383880 -174246270 - ERVL LTR ERVL -2303 3461 3388 1786 216 58 58 chr5 25383880 25384132 -174246018 - MLT1D LTR MaLR -1 504 253 186 43 0 0 chr5 25384132 25384155 -174245995 + (TC)n Simple_repeat Simple_repeat 2 24 0 2141 134 0 3 chr5 25384155 25384468 -174245682 - AluSq SINE Alu -1 312 1 1786 216 58 58 chr5 25384468 25384718 -174245432 - MLT1D LTR MaLR -250 255 1 2675 302 46 48 chr5 25384718 25384791 -174245359 - ERVL LTR ERVL -2376 3388 3316 5638 37 0 3 chr5 25384791 25385468 -174244682 + L1PA3 LINE L1 5478 6152 -3 2675 302 46 48 chr5 25385468 25386730 -174243420 - ERVL LTR ERVL -2448 3316 2054 358 267 9 9 chr5 25386855 25386960 -174243190 - ERVL LTR ERVL -3905 1859 1755 5212 41 2 2 chr5 25386981 25387613 -174242537 - L1PA5 LINE L1 -8 6146 5515 506 333 56 0 chr5 25387615 25387810 -174242340 + L1MC/D LINE L1 5459 5664 -2144 548 246 7 7 chr5 25388750 25388892 -174241258 + L1MA10 LINE L1 6179 6320 -14 1795 221 13 66 chr5 25388896 25389366 -174240784 + MER74C LTR ERVL 4 448 -12 1494 314 87 50 chr5 25389383 25390278 -174239872 + HERVL74 LTR ERVL 3 930 -4755 237 234 47 16 chr5 25390581 25390645 -174239505 + MIR SINE MIR 79 144 -64 405 322 110 49 chr5 25390876 25391305 -174238845 + L1 LINE L1 4884 5338 -808 421 287 51 72 chr5 25391326 25391563 -174238587 + HERVL74 LTR ERVL 674 905 -4780 3761 191 35 10 chr5 25391628 25393023 -174237127 + L1MA3 LINE L1 30 1389 -6335 414 0 0 0 chr5 25393023 25393069 -174237081 + (TAA)n Simple_repeat Simple_repeat 2 47 0 3761 191 35 10 chr5 25393069 25394154 -174235996 + L1MA3 LINE L1 1389 2446 -5278 2566 65 0 0 chr5 25394154 25394460 -174235690 + AluY SINE Alu 1 306 -5 3761 191 35 10 chr5 25394460 25395518 -174234632 + L1MA3 LINE L1 2446 3476 -4248 2107 138 0 0 chr5 25395518 25395816 -174234334 + AluSc SINE Alu 1 298 -11 3761 191 35 10 chr5 25395816 25396463 -174233687 + L1MA3 LINE L1 3476 4106 -3618 2224 114 0 3 chr5 25396463 25396761 -174233389 + AluSx SINE Alu 1 297 -15 3761 191 35 10 chr5 25396761 25397024 -174233126 + L1MA3 LINE L1 4106 4361 -3363 189 0 0 0 chr5 25397024 25397045 -174233105 + (TAA)n Simple_repeat Simple_repeat 2 22 0 3761 191 35 10 chr5 25397045 25399377 -174230773 + L1MA3 LINE L1 4361 7128 -596 1493 102 0 23 chr5 25399377 25399593 -174230557 + AluSq SINE Alu 98 308 -5 3761 191 35 10 chr5 25399593 25400206 -174229944 + L1MA3 LINE L1 7128 7724 0 186 300 20 0 chr5 25400223 25400273 -174229877 - L2 LINE L2 -84 3229 3179 285 135 0 0 chr5 25400745 25400797 -174229353 + (CA)n Simple_repeat Simple_repeat 2 53 0 1742 259 33 55 chr5 25400797 25401375 -174228775 + MLT1E2 LTR MaLR 37 601 -25 414 0 0 0 chr5 25401407 25401453 -174228697 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 21 0 0 0 chr5 25401532 25401553 -174228597 + AT_rich Low_complexity Low_complexity 1 21 0 235 257 73 92 chr5 25402363 25402581 -174227569 - L2 LINE L2 0 3313 3100 1943 142 11 0 chr5 25403179 25403461 -174226689 + AluSq SINE Alu 1 285 -28 2943 28 11 16 chr5 25403463 25403849 -174226301 + L1PA4 LINE L1 5794 6155 0 1918 143 52 25 chr5 25405576 25405941 -174224209 - THE1C LTR MaLR 0 375 1 29 0 0 0 chr5 25406747 25406776 -174223374 + AT_rich Low_complexity Low_complexity 1 29 0 1551 126 7 96 chr5 25406786 25407088 -174223062 - AluSx SINE Alu -37 275 1 45 19 0 0 chr5 25408710 25408762 -174221388 + AT_rich Low_complexity Low_complexity 1 52 0 35 41 0 0 chr5 25411122 25411171 -174218979 + AT_rich Low_complexity Low_complexity 1 49 0 21 36 0 0 chr5 25411589 25411617 -174218533 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr5 25412222 25412262 -174217888 + AT_rich Low_complexity Low_complexity 1 40 0 192 255 20 0 chr5 25413756 25413807 -174216343 + MIR SINE MIR 156 207 -55 268 196 11 63 chr5 25414021 25414210 -174215940 + (TA)n Simple_repeat Simple_repeat 2 180 0 24 0 0 0 chr5 25415297 25415321 -174214829 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 25416008 25416032 -174214118 + AT_rich Low_complexity Low_complexity 1 24 0 450 0 0 0 chr5 25416034 25416084 -174214066 + (TTC)n Simple_repeat Simple_repeat 2 51 0 7749 98 12 5 chr5 25416088 25418055 -174212095 - L1PA7 LINE L1 -8 6161 4145 1396 177 157 20 chr5 25418326 25418670 -174211480 - MSTB LTR MaLR -35 391 1 1309 226 82 15 chr5 25419472 25419812 -174210338 - MLT1A1 LTR MaLR -2 363 1 202 235 0 51 chr5 25421579 25421677 -174208473 + T-rich Low_complexity Low_complexity 5 97 0 817 189 17 63 chr5 25421837 25422012 -174208138 - FAM SINE Alu -8 167 1 782 252 50 90 chr5 25422043 25422444 -174207706 - MLT1B LTR MaLR -5 385 1 1711 173 133 13 chr5 25422515 25422897 -174207253 + MSTA LTR MaLR 1 428 0 2338 169 5 28 chr5 25423043 25423480 -174206670 + Tigger2a DNA MER2_type 1 427 -7 1595 219 76 3 chr5 25423656 25424025 -174206125 + MSTD LTR MaLR 1 396 0 304 314 160 24 chr5 25424196 25424572 -174205578 + L1 LINE L1 2890 3316 -2830 24 0 0 0 chr5 25424573 25424597 -174205553 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 25424624 25424646 -174205504 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 25425056 25425086 -174205064 + AT_rich Low_complexity Low_complexity 1 30 0 750 327 82 39 chr5 25425181 25426030 -174204120 + L1MEd LINE L1 682 1580 -4549 696 253 152 86 chr5 25427000 25427285 -174202865 + MLT2B1 LTR ERVL 1 333 -187 2459 63 0 0 chr5 25427285 25427587 -174202563 + AluY SINE Alu 1 302 -9 696 253 152 86 chr5 25427587 25427788 -174202362 + MLT2B1 LTR ERVL 333 519 -1 664 117 9 9 chr5 25427793 25427904 -174202246 + MLT-int LTR MaLR 5 115 -1620 * 1949 232 4 24 chr5 25427898 25428367 -174201783 + MSTD-int LTR MaLR 263 722 -649 294 281 22 0 chr5 25428509 25428598 -174201552 + MSTD-int LTR MaLR 676 766 -969 1753 241 21 17 chr5 25428685 25429105 -174201045 + MSTD-int LTR MaLR 1314 1735 0 1088 201 85 63 chr5 25429105 25429483 -174200667 + MLT1B LTR MaLR 1 386 -4 307 330 105 38 chr5 25429844 25430111 -174200039 + L3 LINE CR1 1129 1413 -164 771 198 86 26 chr5 25430113 25430229 -174199921 - L1MD3 LINE L1 -18 7977 7869 231 103 0 0 chr5 25430229 25430268 -174199882 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 771 198 86 26 chr5 25430268 25430383 -174199767 - L1MD3 LINE L1 -126 7869 7732 2068 107 21 0 chr5 25431678 25431969 -174198181 + AluSp SINE Alu 1 297 -16 2168 117 0 0 chr5 25432184 25432500 -174197650 - AluSx SINE Alu 0 316 1 22 35 0 0 chr5 25432624 25432653 -174197497 + AT_rich Low_complexity Low_complexity 1 29 0 305 121 0 69 chr5 25432727 25432785 -174197365 - MLT1E1 LTR MaLR -408 246 193 1033 248 72 30 chr5 25432842 25433186 -174196964 + MSTD LTR MaLR 19 428 0 262 240 0 0 chr5 25433247 25433297 -174196853 - MLT2F LTR ERVL -612 51 2 610 303 51 37 chr5 25434851 25435145 -174195005 - MER68 LTR ERV1 -4 558 261 42059 32 25 4 chr5 25435157 25441182 -174188968 + L1PA3 LINE L1 2 6154 -1 497 274 96 0 chr5 25441229 25441375 -174188775 - MER68 LTR ERV1 -348 214 55 565 240 0 0 chr5 25441727 25441829 -174188321 - MER58B DNA MER1_type 0 341 240 528 212 97 88 chr5 25441829 25442212 -174187938 - LTR35 LTR ERV1 0 556 196 22 0 0 0 chr5 25442349 25442371 -174187779 + AT_rich Low_complexity Low_complexity 1 22 0 2756 133 52 68 chr5 25442836 25443408 -174186742 + LTR1 LTR ERV1 32 594 -191 5850 132 182 84 chr5 25443418 25444959 -174185191 - pTR5 LTR ERV1 0 2438 747 1136 184 11 0 chr5 25444959 25445149 -174185001 + LTR1 LTR ERV1 594 785 0 186 212 0 0 chr5 25445153 25445186 -174184964 + MER5B DNA MER1_type 1 33 -145 3428 159 6 54 chr5 25445931 25446054 -174184096 + LTR35 LTR ERV1 1 128 -490 3487 137 73 2 chr5 25446054 25446645 -174183505 - MER41B LTR ERV1 0 635 3 3428 159 6 54 chr5 25446645 25447170 -174182980 + LTR35 LTR ERV1 128 618 0 350 284 78 50 chr5 25447189 25447407 -174182743 + LTR35-int LTR ERV1 1067 1290 -6247 6306 179 6 62 chr5 25447766 25449086 -174181064 + LTR35-int LTR ERV1 863 2108 -3838 1121 150 8 69 chr5 25449136 25449396 -174180754 + LTR35-int LTR ERV1 2758 3001 -2945 2862 208 55 23 chr5 25449468 25450065 -174180085 - LTR58 LTR ERV1 -3 676 55 2198 181 15 0 chr5 25450065 25450462 -174179688 - MER57A LTR ERV1 0 403 1 2862 208 55 23 chr5 25450462 25450519 -174179631 - LTR58 LTR ERV1 -624 55 1 8261 194 58 71 chr5 25450519 25451871 -174178279 + LTR35-int LTR ERV1 3031 3297 -1639 2125 168 100 72 chr5 25451871 25452443 -174177707 + LTR4 LTR ERV1 1 588 0 8261 194 58 71 chr5 25452443 25453630 -174176520 + LTR35-int LTR ERV1 3297 4499 -437 334 145 0 16 chr5 25453710 25453772 -174176378 + LTR35-int LTR ERV1 5994 6054 -277 1908 157 7 0 chr5 25454114 25454436 -174175714 + AluSx SINE Alu 1 324 0 3044 171 8 64 chr5 25454462 25455117 -174175033 + LTR35 LTR ERV1 1 618 0 299 330 0 9 chr5 25455678 25455755 -174174395 + GA-rich Low_complexity Low_complexity 3 80 -27 2045 130 7 0 chr5 25455755 25456048 -174174102 + AluSc SINE Alu 1 295 -14 299 330 0 9 chr5 25456048 25456076 -174174074 + GA-rich Low_complexity Low_complexity 80 107 0 2276 96 3 0 chr5 25456107 25456410 -174173740 + AluY SINE Alu 1 304 -7 259 17 17 83 chr5 25456413 25456473 -174173677 + (TTA)n Simple_repeat Simple_repeat 3 58 0 282 295 50 43 chr5 25456719 25456858 -174173292 + MIR SINE MIR 73 212 -50 1340 239 18 34 chr5 25457805 25458185 -174171965 + MLT1A2 LTR MaLR 1 374 0 679 200 18 5 chr5 25459609 25459768 -174170382 - L1MA8 LINE L1 -2 6298 6131 21 36 0 0 chr5 25459808 25459836 -174170314 + AT_rich Low_complexity Low_complexity 1 28 0 514 135 10 19 chr5 25459836 25459940 -174170210 - L1MA9 LINE L1 -19 6293 6191 226 209 0 0 chr5 25460245 25460288 -174169862 + CT-rich Low_complexity Low_complexity 2 44 0 4245 107 6 2 chr5 25461545 25462169 -174167981 + L1PA13 LINE L1 5537 6163 0 189 281 0 56 chr5 25462506 25462595 -174167555 + L2 LINE L2 3016 3099 -214 27 49 0 0 chr5 25464615 25464656 -174165494 + AT_rich Low_complexity Low_complexity 1 41 0 1862 157 0 20 chr5 25466075 25466375 -174163775 + AluSx SINE Alu 3 296 -16 23 0 0 0 chr5 25466437 25466460 -174163690 + AT_rich Low_complexity Low_complexity 1 23 0 2281 185 129 13 chr5 25467192 25467750 -174162400 + LTR28 LTR ERV1 1 1266 -444 452 277 43 28 chr5 25467754 25467895 -174162255 + LTR27 LTR ERV1 494 636 0 198 0 0 0 chr5 25467910 25467932 -174162218 + (GA)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr5 25468229 25468250 -174161900 + AT_rich Low_complexity Low_complexity 1 21 0 332 299 40 62 chr5 25468266 25468490 -174161660 + L1M4 LINE L1 4029 4247 -1899 2007 166 6 11 chr5 25469043 25469399 -174160751 - L1P LINE L1 -1911 4235 3882 378 134 60 0 chr5 25469400 25469467 -174160683 + L1MA3 LINE L1 5893 5963 -342 25 31 0 0 chr5 25469688 25469720 -174160430 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 25470073 25470096 -174160054 + AT_rich Low_complexity Low_complexity 1 23 0 466 262 21 35 chr5 25472247 25472373 -174157777 + MLT1C LTR MaLR 62 187 -280 1798 155 7 10 chr5 25472373 25472683 -174157467 + AluSx SINE Alu 1 309 -3 466 262 21 35 chr5 25472683 25472701 -174157449 + MLT1C LTR MaLR 187 204 -263 21 0 0 0 chr5 25472723 25472744 -174157406 + AT_rich Low_complexity Low_complexity 1 21 0 6049 59 1 0 chr5 25472841 25473599 -174156551 - L1PA7 LINE L1 -4 6150 5392 616 175 54 19 chr5 25474842 25474999 -174155151 - L1MA8 LINE L1 -161 6130 5954 227 299 58 80 chr5 25475092 25475316 -174154834 - L1MEd LINE L1 -4906 1213 995 2140 122 7 0 chr5 25475799 25476102 -174154048 + AluY SINE Alu 1 305 -6 246 208 83 0 chr5 25476275 25476347 -174153803 - MLT1J LTR MaLR -30 481 404 289 298 111 0 chr5 25476822 25477030 -174153120 - L1MDa LINE L1 -4636 1904 1674 231 61 0 0 chr5 25477641 25477674 -174152476 + (A)n Simple_repeat Simple_repeat 1 33 0 22 56 0 0 chr5 25477748 25477784 -174152366 + AT_rich Low_complexity Low_complexity 1 36 0 303 259 62 89 chr5 25477842 25478066 -174152084 - L1ME4a LINE L1 -105 6016 5799 401 272 26 26 chr5 25478076 25478267 -174151883 + L1MD2 LINE L1 4836 5026 -1120 1314 216 34 3 chr5 25478338 25478779 -174151371 + AluJo SINE Alu 1 450 0 606 141 13 39 chr5 25478879 25479035 -174151115 + GA-rich Low_complexity Low_complexity 4 155 0 1433 258 58 7 chr5 25479064 25479609 -174150541 + L1MD2 LINE L1 5345 5737 -429 558 242 7 0 chr5 25479681 25479834 -174150316 + L1MA10 LINE L1 6177 6330 -4 22 56 0 0 chr5 25479836 25479872 -174150278 + AT_rich Low_complexity Low_complexity 1 36 0 269 208 129 34 chr5 25480200 25480378 -174149772 + L1ME3A LINE L1 2375 2569 -3577 1200 274 35 44 chr5 25480416 25480850 -174149300 - LTR40a LTR ERVL -89 430 1 512 257 58 18 chr5 25480953 25481179 -174148971 + L1ME3A LINE L1 2678 2912 -3234 329 300 112 52 chr5 25481184 25481611 -174148539 + L1ME3A LINE L1 2882 3334 -2812 447 324 125 0 chr5 25481857 25482153 -174147997 + L1ME3A LINE L1 4012 4344 -1802 31 76 0 0 chr5 25482166 25482232 -174147918 + AT_rich Low_complexity Low_complexity 1 66 0 5526 213 45 20 chr5 25482544 25483214 -174146936 + L1PA3 LINE L1 3638 4289 -1883 2282 80 10 16 chr5 25483214 25483525 -174146625 + AluY SINE Alu 1 309 -2 5526 213 45 20 chr5 25483525 25485260 -174144890 + L1PA3 LINE L1 4289 6172 0 865 325 50 37 chr5 25485274 25486028 -174144122 + L1ME3A LINE L1 5293 6056 -114 24 67 0 0 chr5 25486397 25486442 -174143708 + AT_rich Low_complexity Low_complexity 1 45 0 31 0 0 0 chr5 25487907 25487938 -174142212 + AT_rich Low_complexity Low_complexity 1 31 0 2037 109 7 0 chr5 25488076 25488388 -174141762 + AluSx SINE Alu 1 314 0 235 368 25 37 chr5 25489205 25489368 -174140782 - MIR3 SINE MIR -18 190 30 29 47 0 0 chr5 25490989 25491032 -174139118 + AT_rich Low_complexity Low_complexity 1 43 0 1817 134 31 0 chr5 25491194 25491484 -174138666 + AluSx SINE Alu 6 304 -8 181 284 40 27 chr5 25491488 25491562 -174138588 - L2 LINE L2 -349 2965 2891 1501 43 0 0 chr5 25491644 25491829 -174138321 - L1PA5 LINE L1 -4 6150 5966 565 324 180 32 chr5 25491999 25492728 -174137422 - L2 LINE L2 -695 2619 1783 23 0 0 0 chr5 25493184 25493207 -174136943 + AT_rich Low_complexity Low_complexity 1 23 0 388 329 90 8 chr5 25493361 25493595 -174136555 - L1ME4a LINE L1 -178 5943 5691 21 0 0 0 chr5 25493623 25493644 -174136506 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 25494092 25494123 -174136027 + AT_rich Low_complexity Low_complexity 1 31 0 2501 180 24 3 chr5 25494272 25494799 -174135351 - L1PA16 LINE L1 -2 6153 5600 2105 138 23 0 chr5 25494797 25495265 -174134885 + L1PA16 LINE L1 5124 5600 -566 * 25 0 0 0 chr5 25495315 25495340 -174134810 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 25495597 25495619 -174134531 + AT_rich Low_complexity Low_complexity 1 22 0 718 311 117 20 chr5 25495907 25496309 -174133841 + LTR16A1 LTR ERVL 17 457 0 301 235 81 101 chr5 25496398 25496547 -174133603 - LTR16A LTR ERVL 0 450 305 1550 206 41 39 chr5 25496663 25497052 -174133098 - MLT1B LTR MaLR 0 390 1 427 315 29 34 chr5 25497144 25497382 -174132768 + ERVL LTR ERVL 2104 2340 -3145 371 320 35 59 chr5 25498387 25498590 -174131560 + LTR16A1 LTR ERVL 1 198 -259 22 56 0 0 chr5 25499372 25499408 -174130742 + AT_rich Low_complexity Low_complexity 1 36 0 26 50 0 0 chr5 25499431 25499471 -174130679 + AT_rich Low_complexity Low_complexity 1 40 0 771 309 63 53 chr5 25500242 25500620 -174129530 + MLT2F LTR ERVL 117 498 -165 231 184 0 0 chr5 25500620 25500658 -174129492 - THE1C LTR MaLR 0 428 391 1778 170 13 19 chr5 25500660 25500977 -174129173 - THE1B LTR MaLR 0 364 50 832 145 0 0 chr5 25500977 25501108 -174129042 + THE1-int LTR MaLR 1039 1169 -411 * 7027 113 8 16 chr5 25501107 25502142 -174128008 - THE1B-int LTR MaLR -553 1027 1 1977 141 30 22 chr5 25502142 25502503 -174127647 - THE1B LTR MaLR 0 364 1 1815 158 46 12 chr5 25502503 25502831 -174127319 - THE1C LTR MaLR -36 339 1 739 228 6 25 chr5 25503261 25503423 -174126727 + FRAM SINE Alu 1 159 -17 2376 201 6 46 chr5 25503920 25504158 -174125992 - MLT1D LTR MaLR -3 502 256 2158 135 0 0 chr5 25504158 25504470 -174125680 - AluSx SINE Alu 0 312 1 2376 201 6 46 chr5 25504470 25504749 -174125401 - MLT1D LTR MaLR -249 256 6 435 328 57 33 chr5 25504760 25505004 -174125146 + ERVL LTR ERVL 880 1129 -4635 990 240 65 14 chr5 25505918 25506193 -174123957 + MER99 DNA DNA 6 294 -534 1332 251 56 10 chr5 25506219 25506630 -174123520 + MER99 DNA DNA 355 784 -44 11452 186 32 31 chr5 25508283 25511920 -174118230 + L1MA8 LINE L1 2657 6291 0 27 0 0 0 chr5 25512597 25512624 -174117526 + AT_rich Low_complexity Low_complexity 1 27 0 2640 108 8 0 chr5 25513425 25513846 -174116304 + L1PA15 LINE L1 5404 5832 -324 1049 144 17 0 chr5 25513860 25514034 -174116116 + L1PA15 LINE L1 5986 6162 -3 1442 188 76 0 chr5 25514088 25514402 -174115748 - MER44D DNA MER2_type -1 608 1 1452 193 119 59 chr5 25515201 25515605 -174114545 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr5 25515755 25515777 -174114373 + AT_rich Low_complexity Low_complexity 1 22 0 671 275 45 35 chr5 25517447 25517734 -174112416 - MER67C LTR ERV1 -420 290 1 3059 43 0 0 chr5 25519085 25519454 -174110696 + L1PA3 LINE L1 5787 6155 0 578 14 14 0 chr5 25519613 25519684 -174110466 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 1448 97 53 4 chr5 25519813 25520039 -174110111 + MLT2A1 LTR ERVL 1 237 -207 8196 79 1 8 chr5 25520172 25521249 -174108901 + HERVL-A1 LTR ERVL 1820 2888 -2766 * 10579 93 5 5 chr5 25521233 25522684 -174107466 + HERVL-A1 LTR ERVL 4204 5654 0 2772 100 24 40 chr5 25522684 25523135 -174107015 + MLT2A1 LTR ERVL 1 444 0 1359 194 42 31 chr5 25523866 25524018 -174106132 + L1MA8 LINE L1 5559 5708 -583 369 0 0 0 chr5 25524018 25524059 -174106091 + (TA)n Simple_repeat Simple_repeat 2 42 0 1359 194 42 31 chr5 25524059 25524261 -174105889 + L1MA8 LINE L1 5708 5917 -374 2058 175 52 99 chr5 25524418 25524533 -174105617 + L1MA9 LINE L1 5598 5717 -595 338 0 24 0 chr5 25524533 25524575 -174105575 + (TA)n Simple_repeat Simple_repeat 2 44 0 2058 175 52 99 chr5 25524575 25525209 -174104941 + L1MA9 LINE L1 5717 6312 0 3566 157 98 5 chr5 25526784 25527434 -174102716 - MER50 LTR ERV1 -23 711 1 4197 199 54 10 chr5 25527890 25529242 -174100908 - MER52A LTR ERV1 0 1755 281 285 253 63 0 chr5 25529755 25529850 -174100300 - MER52A LTR ERV1 -1654 101 1 326 338 25 13 chr5 25530402 25530559 -174099591 + L2 LINE L2 3155 3313 0 27 29 0 0 chr5 25530676 25530710 -174099440 + AT_rich Low_complexity Low_complexity 1 34 0 422 300 25 8 chr5 25532720 25532840 -174097310 - MIR SINE MIR -111 151 30 27 0 0 0 chr5 25533201 25533228 -174096922 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 25533684 25533712 -174096438 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 25534068 25534091 -174096059 + AT_rich Low_complexity Low_complexity 1 23 0 845 156 0 0 chr5 25534171 25534299 -174095851 + FLAM_C SINE Alu 2 129 -14 197 293 41 57 chr5 25534358 25534481 -174095669 - L2 LINE L2 -610 2704 2584 23 33 0 0 chr5 25534595 25534625 -174095525 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr5 25534742 25534779 -174095371 + AT_rich Low_complexity Low_complexity 1 37 0 422 138 0 0 chr5 25534960 25535040 -174095110 + L1MA3 LINE L1 6226 6305 0 1910 145 10 3 chr5 25535140 25535450 -174094700 + AluSx SINE Alu 1 312 0 213 178 0 0 chr5 25536482 25536527 -174093623 + (TA)n Simple_repeat Simple_repeat 1 45 0 473 310 66 15 chr5 25536669 25536866 -174093284 + MIR SINE MIR 40 246 -16 2954 156 27 7 chr5 25537279 25538301 -174091849 - Tigger4(Zombi) DNA MER2_type -2 2729 1638 263 188 0 0 chr5 25538298 25538346 -174091804 + Tigger4(Zombi) DNA MER2_type 1295 1342 -1389 * 7177 178 57 9 chr5 25538343 25539714 -174090436 - Tigger4(Zombi) DNA MER2_type -1283 1448 13 21 67 0 17 chr5 25540013 25540043 -174090107 + AT_rich Low_complexity Low_complexity 1 30 -29 5373 140 26 4 chr5 25540043 25541069 -174089081 - L1PA16 LINE L1 -2 6164 5128 21 67 0 17 chr5 25541069 25541098 -174089052 + AT_rich Low_complexity Low_complexity 30 59 0 265 286 22 11 chr5 25541510 25541601 -174088549 + MLT1J2 LTR MaLR 69 160 -290 33 0 0 0 chr5 25542006 25542039 -174088111 + AT_rich Low_complexity Low_complexity 1 33 0 2085 124 28 0 chr5 25543210 25543500 -174086650 + AluSq SINE Alu 1 298 -15 32 81 0 0 chr5 25543784 25543858 -174086292 + AT_rich Low_complexity Low_complexity 1 74 0 290 141 0 16 chr5 25544902 25544966 -174085184 + (TA)n Simple_repeat Simple_repeat 1 63 0 1962 150 0 0 chr5 25544966 25545253 -174084897 - AluSg SINE Alu -23 287 1 4248 240 73 38 chr5 25545301 25546281 -174083869 - L1MC1 LINE L1 0 6613 5668 2123 82 0 4 chr5 25546281 25546610 -174083540 - AluSc SINE Alu 0 329 2 4248 240 73 38 chr5 25546610 25547823 -174082327 - L1MC1 LINE L1 -945 5668 4341 3504 232 63 51 chr5 25547812 25550253 -174079897 - L1MC1 LINE L1 -2590 3836 1367 * 3821 194 30 86 chr5 25550238 25551283 -174078867 - L1MC1 LINE L1 -5366 1060 75 26 82 0 0 chr5 25552506 25552567 -174077583 + AT_rich Low_complexity Low_complexity 1 61 0 26 0 0 0 chr5 25552681 25552707 -174077443 + AT_rich Low_complexity Low_complexity 1 26 0 1778 160 38 0 chr5 25552758 25553046 -174077104 - AluSq SINE Alu -13 300 2 27 49 0 0 chr5 25553346 25553387 -174076763 + AT_rich Low_complexity Low_complexity 1 41 0 230 157 0 59 chr5 25554177 25554228 -174075922 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 225 402 8 17 chr5 25554620 25554737 -174075413 - L2 LINE L2 -4 3268 3153 21 71 0 0 chr5 25555242 25555284 -174074866 + AT_rich Low_complexity Low_complexity 1 42 0 381 329 53 12 chr5 25555418 25555661 -174074489 + MLT1J LTR MaLR 1 253 -258 281 264 96 60 chr5 25555715 25555882 -174074268 + MLT1J LTR MaLR 339 511 0 390 214 26 146 chr5 25555985 25556177 -174073973 - LTR16A1 LTR ERVL -5 452 284 21 0 0 0 chr5 25556589 25556610 -174073540 + AT_rich Low_complexity Low_complexity 1 21 0 553 100 0 0 chr5 25556639 25556719 -174073431 - MADE1 DNA Mariner 0 80 1 2390 195 76 52 chr5 25556761 25557595 -174072555 - L1MB3 LINE L1 -335 6084 5227 2239 110 0 0 chr5 25557595 25557904 -174072246 + AluSc SINE Alu 1 309 0 2390 195 76 52 chr5 25557904 25558063 -174072087 - L1MB3 LINE L1 -1192 5227 5073 6339 246 37 19 chr5 25558077 25558385 -174071765 - L1MB3 LINE L1 -1578 4804 4503 255 61 0 0 chr5 25558385 25558418 -174071732 + (TG)n Simple_repeat Simple_repeat 2 34 0 6339 246 37 19 chr5 25558418 25560209 -174069941 - L1MB3 LINE L1 -1879 4503 2667 980 9 0 0 chr5 25560209 25560322 -174069828 - AluYa5/8 SINE Alu 0 311 199 9708 197 55 36 chr5 25560407 25561957 -174068193 - L1MB3 LINE L1 -3940 2444 832 180 0 0 0 chr5 25561957 25561977 -174068173 + (TTG)n Simple_repeat Simple_repeat 2 21 0 9708 197 55 36 chr5 25561977 25562808 -174067342 - L1MB3 LINE L1 -5552 832 18 21 36 0 0 chr5 25563732 25563760 -174066390 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 25564672 25564698 -174065452 + AT_rich Low_complexity Low_complexity 1 26 0 1311 169 59 17 chr5 25565134 25565371 -174064779 + Charlie3 DNA MER1_type 1 247 -2463 1278 122 19 24 chr5 25565358 25565563 -174064587 + Charlie3 DNA MER1_type 2503 2706 -4 * 32 43 0 0 chr5 25566655 25566701 -174063449 + AT_rich Low_complexity Low_complexity 1 46 0 53 90 0 0 chr5 25567231 25567375 -174062775 + AT_rich Low_complexity Low_complexity 1 144 0 897 189 18 84 chr5 25568176 25568462 -174061688 - L1MA9 LINE L1 -38 6274 6008 1115 232 140 29 chr5 25568464 25568813 -174061337 + L1MA9 LINE L1 5624 6011 -301 663 303 40 0 chr5 25569135 25569363 -174060787 - MIR SINE MIR -21 241 5 7013 95 12 7 chr5 25669440 25670465 -173959685 - L1P LINE L1 -798 5348 4319 26 0 0 0 chr5 25671355 25671381 -173958769 + AT_rich Low_complexity Low_complexity 1 26 0 418 242 51 47 chr5 25671409 25671624 -173958526 - L1MC5 LINE L1 -115 7846 7631 389 269 92 56 chr5 25671627 25671987 -173958163 - L1MC5 LINE L1 -476 7485 7113 395 82 98 0 chr5 25671993 25672054 -173958096 - MLT2A2 LTR ERVL 0 453 387 1981 148 39 27 chr5 25672185 25672704 -173957446 - MLT2A2 LTR ERVL -32 506 1 326 319 21 7 chr5 25672733 25672877 -173957273 - L1MC4 LINE L1 -1018 7024 6879 286 214 22 22 chr5 25672890 25672979 -173957171 + MER94 DNA DNA 25 113 -21 216 0 0 0 chr5 25673050 25673074 -173957076 + (TTA)n Simple_repeat Simple_repeat 2 25 0 24 0 0 0 chr5 25673191 25673215 -173956935 + AT_rich Low_complexity Low_complexity 1 24 0 2539 55 0 0 chr5 25673848 25674156 -173955994 - AluY SINE Alu -3 308 1 839 202 0 21 chr5 25675356 25675544 -173954606 - L1M4c LINE L1 -3640 2742 2559 1929 119 16 3 chr5 25675544 25675855 -173954295 + L1MA1 LINE L1 5987 6302 0 39 0 0 0 chr5 25675978 25676017 -173954133 + AT_rich Low_complexity Low_complexity 1 39 0 407 243 90 0 chr5 25676427 25676538 -173953612 + MER3 DNA MER1_type 1 121 -88 322 278 142 87 chr5 25676624 25677005 -173953145 + L1ME LINE L1 5258 5659 -462 2017 119 0 57 chr5 25677154 25677472 -173952678 + AluSq SINE Alu 2 301 -12 515 343 103 44 chr5 25677790 25678178 -173951972 + L2 LINE L2 88 498 -2816 31 26 0 0 chr5 25678252 25678290 -173951860 + AT_rich Low_complexity Low_complexity 1 38 0 218 125 21 0 chr5 25678459 25678507 -173951643 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 1326 277 69 35 chr5 25678786 25679023 -173951127 - L1M4c LINE L1 -4607 1777 1549 2426 87 0 0 chr5 25679023 25679333 -173950817 - AluY SINE Alu -1 310 1 1326 277 69 35 chr5 25679333 25679778 -173950372 - L1M4c LINE L1 -4835 1549 1072 553 299 48 30 chr5 25680343 25680778 -173949372 - L1MEc LINE L1 -4832 1710 1268 279 250 39 23 chr5 25681234 25681362 -173948788 - L1MEc LINE L1 -6212 613 484 22 0 0 0 chr5 25682365 25682387 -173947763 + AT_rich Low_complexity Low_complexity 1 22 0 183 80 0 0 chr5 25683040 25683065 -173947085 + (GA)n Simple_repeat Simple_repeat 2 26 0 2201 98 0 3 chr5 25683312 25683624 -173946526 + AluSq SINE Alu 1 311 0 877 296 4 15 chr5 25683689 25683953 -173946197 + L1MDa LINE L1 19 279 -6261 826 176 47 0 chr5 25684575 25684745 -173945405 + L1MA7 LINE L1 5984 6161 -130 435 139 0 0 chr5 25684849 25684928 -173945222 + L1MA7 LINE L1 6207 6285 -6 686 204 120 22 chr5 25684939 25685164 -173944986 + L1MDa LINE L1 970 1216 -5327 2008 116 0 14 chr5 25685164 25685448 -173944702 + AluSx SINE Alu 2 281 -31 7104 52 0 0 chr5 25685843 25686913 -173943237 - L1PA5 LINE L1 0 6154 5082 26 50 0 0 chr5 25687261 25687301 -173942849 + AT_rich Low_complexity Low_complexity 1 40 0 191 36 36 0 chr5 25688084 25688112 -173942038 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 37 39 0 0 chr5 25688993 25689044 -173941106 + AT_rich Low_complexity Low_complexity 1 51 0 25 0 0 0 chr5 25689134 25689159 -173940991 + AT_rich Low_complexity Low_complexity 1 25 0 351 0 0 0 chr5 25690665 25690704 -173939446 + (TTA)n Simple_repeat Simple_repeat 1 39 0 1235 184 24 14 chr5 25690901 25691189 -173938961 + L1MA4 LINE L1 6005 6295 -5 21 36 0 0 chr5 25692421 25692449 -173937701 + AT_rich Low_complexity Low_complexity 1 28 0 331 85 51 0 chr5 25693625 25693684 -173936466 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 2472 66 3 0 chr5 25694556 25694860 -173935290 + AluY SINE Alu 1 305 -6 370 262 78 43 chr5 25695214 25695355 -173934795 + MLT1L LTR MaLR 362 507 -108 2351 73 7 0 chr5 25696276 25696579 -173933571 - AluY SINE Alu -6 305 1 308 237 65 43 chr5 25697023 25697116 -173933034 + MLT1A2 LTR MaLR 5 99 -275 181 283 19 0 chr5 25697511 25697564 -173932586 - L2 LINE L2 -894 2420 2367 6492 76 8 5 chr5 25697608 25698478 -173931672 - L1PA7 LINE L1 -4 6150 5278 264 346 78 28 chr5 25698493 25698851 -173931299 - L2 LINE L2 -995 2319 1944 2305 220 62 37 chr5 25699876 25700471 -173929679 - MER90 LTR ERV1 -1 613 4 258 338 107 11 chr5 25700760 25701041 -173929109 + L1ME3A LINE L1 4625 4932 -1214 275 238 0 12 chr5 25701054 25701138 -173929012 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 850 271 18 7 chr5 25701186 25701459 -173928691 + L1ME3A LINE L1 5523 5798 -372 1079 263 128 37 chr5 25701496 25701957 -173928193 + MLT1F1 LTR MaLR 63 565 -2 536 297 100 34 chr5 25701979 25702299 -173927851 + L1ME3A LINE L1 5812 6152 -18 312 299 51 40 chr5 25702415 25702592 -173927558 - L1MDa LINE L1 -3894 2646 2468 28 48 0 0 chr5 25702785 25702827 -173927323 + AT_rich Low_complexity Low_complexity 1 42 0 423 0 0 0 chr5 25703810 25703857 -173926293 + (TA)n Simple_repeat Simple_repeat 2 48 0 2085 113 17 0 chr5 25703953 25704244 -173925906 + AluSx SINE Alu 1 296 -16 254 171 14 0 chr5 25704252 25704322 -173925828 + (TG)n Simple_repeat Simple_repeat 2 72 0 892 224 6 0 chr5 25704515 25704758 -173925392 + FAM SINE Alu 1 108 0 275 310 260 5 chr5 25705237 25705437 -173924713 - MIR SINE MIR -11 251 1 23 0 0 0 chr5 25705880 25705903 -173924247 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 25705972 25705994 -173924156 + AT_rich Low_complexity Low_complexity 1 22 0 888 90 0 0 chr5 25706031 25706153 -173923997 - L1PA7 LINE L1 -1 6153 6032 3500 128 26 29 chr5 25706253 25706902 -173923248 - L1P LINE L1 -2153 3993 3347 2673 51 27 0 chr5 25706902 25707237 -173922913 - LTR14A LTR ERVK 0 344 1 757 71 18 35 chr5 25707240 25707353 -173922797 - HERVK14 LTR ERVK 0 5945 5835 363 172 0 18 chr5 25707354 25707428 -173922722 - MER41C LTR ERV1 -493 61 1 5621 66 83 8 chr5 25707428 25708200 -173921950 - HERVK14 LTR ERVK -186 5759 4930 * 22386 71 3 6 chr5 25708190 25709150 -173921000 - HERVK14 LTR ERVK -3083 2862 1900 5175 88 91 21 chr5 25709150 25709922 -173920228 + LTR12 LTR ERV1 1 826 0 22386 71 3 6 chr5 25709922 25711833 -173918317 - HERVK14 LTR ERVK -4045 1900 1 2541 85 12 0 chr5 25711833 25712173 -173917977 - LTR14A LTR ERVK 0 344 1 5305 100 6 2 chr5 25712175 25712975 -173917175 - L1P LINE L1 -2794 3352 2550 692 278 0 48 chr5 25712983 25713256 -173916894 + pTR5 LTR ERV1 769 1028 -1410 4233 118 82 69 chr5 25713442 25714256 -173915894 + LTR12 LTR ERV1 1 825 -1 845 81 81 0 chr5 25714257 25714380 -173915770 + LTR12 LTR ERV1 582 714 0 12102 128 16 54 chr5 25714380 25717253 -173912897 - L1P3 LINE L1 -3586 2875 8 180 0 0 0 chr5 25717556 25717576 -173912574 + (A)n Simple_repeat Simple_repeat 1 20 0 26 0 0 0 chr5 25718238 25718264 -173911886 + AT_rich Low_complexity Low_complexity 1 26 0 976 303 3 18 chr5 25718663 25718990 -173911160 - ERVL LTR ERVL -636 5128 4807 22 0 0 0 chr5 25720970 25720992 -173909158 + AT_rich Low_complexity Low_complexity 1 22 0 335 362 51 7 chr5 25722271 25722409 -173907741 + MIR3 SINE MIR 44 187 -21 2366 144 3 0 chr5 25722534 25722895 -173907255 + THE1B LTR MaLR 1 362 -2 541 175 42 0 chr5 25723055 25723175 -173906975 + MLT1D LTR MaLR 379 503 -2 266 350 124 0 chr5 25723434 25723571 -173906579 + L2 LINE L2 1432 1585 -1729 854 345 123 14 chr5 25723592 25724186 -173905964 - L2 LINE L2 -773 2541 1883 592 346 59 30 chr5 25724264 25724866 -173905284 + L2 LINE L2 2615 3313 0 826 214 50 5 chr5 25725130 25725331 -173904819 - AluJo SINE Alu -4 308 99 653 135 0 0 chr5 25725455 25725551 -173904599 - AluJo SINE Alu -212 100 5 775 341 54 60 chr5 25725839 25726995 -173903155 + L2 LINE L2 2152 3309 -4 23 0 0 0 chr5 25727242 25727265 -173902885 + AT_rich Low_complexity Low_complexity 1 23 0 183 42 0 0 chr5 25729673 25729697 -173900453 + (TATG)n Simple_repeat Simple_repeat 3 26 0 29 0 0 0 chr5 25729761 25729790 -173900360 + AT_rich Low_complexity Low_complexity 1 29 0 1830 177 124 111 chr5 25729872 25730029 -173900121 + MLT2D LTR ERVL 1 154 -310 2130 139 128 8 chr5 25730029 25730411 -173899739 - MSTA LTR MaLR 0 428 1 1830 177 124 111 chr5 25730411 25730636 -173899514 + MLT2D LTR ERVL 154 392 -72 312 27 0 0 chr5 25730636 25730673 -173899477 + (TG)n Simple_repeat Simple_repeat 2 38 0 1830 177 124 111 chr5 25730673 25730747 -173899403 + MLT2D LTR ERVL 392 464 0 451 262 60 13 chr5 25732368 25732517 -173897633 - MLT2E LTR ERVL -441 187 32 542 304 13 27 chr5 25733210 25733434 -173896716 - ERVL LTR ERVL -673 5091 4871 1089 233 164 31 chr5 25734320 25734766 -173895384 + MLT1D LTR MaLR 1 505 0 365 170 80 62 chr5 25734903 25735015 -173895135 - MER51D LTR ERV1 -44 613 500 284 246 15 0 chr5 25736058 25736123 -173894027 + tRNA-Phe-TTC tRNA tRNA 4 69 -7 28 29 0 0 chr5 25736849 25736884 -173893266 + AT_rich Low_complexity Low_complexity 1 35 0 29 28 0 0 chr5 25737537 25737573 -173892577 + AT_rich Low_complexity Low_complexity 1 36 0 379 240 0 0 chr5 25737867 25737942 -173892208 + Charlie1 DNA MER1_type 1517 1591 -1170 2163 110 0 17 chr5 25737943 25738243 -173891907 + AluSx SINE Alu 1 295 -17 220 205 0 0 chr5 25738244 25738283 -173891867 + (CATA)n Simple_repeat Simple_repeat 2 40 0 564 291 114 24 chr5 25738622 25739123 -173891027 - HAL1 LINE L1 -102 2405 1860 435 326 33 37 chr5 25739279 25739521 -173890629 - HAL1 LINE L1 -877 1630 1390 1267 97 102 0 chr5 25739567 25739763 -173890387 - L1PA10 LINE L1 -5 6163 5948 2070 131 3 0 chr5 25739919 25740217 -173889933 + AluY SINE Alu 1 299 -12 500 281 96 65 chr5 25740255 25740850 -173889300 - HAL1 LINE L1 -1156 1351 739 26 0 0 0 chr5 25741340 25741366 -173888784 + AT_rich Low_complexity Low_complexity 1 26 0 262 203 0 34 chr5 25741537 25741596 -173888554 - Tigger5 DNA MER2_type -4 2319 2263 565 244 67 12 chr5 25741607 25741771 -173888379 + MER58B DNA MER1_type 167 339 -2 2274 98 0 0 chr5 25741848 25742144 -173888006 + AluSq SINE Alu 1 296 -17 1143 188 0 27 chr5 25742471 25742694 -173887456 + AluJo SINE Alu 85 301 -11 1404 215 24 53 chr5 25743303 25743679 -173886471 - MLT1A1 LTR MaLR 0 365 1 2042 190 81 0 chr5 25743679 25744073 -173886077 - MLT1A1-int LTR MaLR 0 1735 1310 312 325 57 0 chr5 25744139 25744262 -173885888 - MLT1A1-int LTR MaLR -421 1314 1185 547 316 95 7 chr5 25746636 25747327 -173882823 - L1ME LINE L1 -441 5721 4969 2446 68 0 0 chr5 25747766 25748077 -173882073 - AluY SINE Alu 0 311 1 214 403 25 8 chr5 25748227 25748346 -173881804 - MIR SINE MIR -72 136 16 1204 196 69 16 chr5 25748603 25748909 -173881241 - L1MD3 LINE L1 -15 7980 7659 692 191 115 27 chr5 25749013 25749196 -173880954 - LTR1B LTR ERV1 -259 567 369 456 302 28 35 chr5 25749336 25749591 -173880559 + MER34B LTR ERV1 313 565 0 1009 239 12 12 chr5 25749591 25749685 -173880465 - L1MD3 LINE L1 -330 7665 7572 2034 211 135 40 chr5 25749685 25750439 -173879711 - LTR1B LTR ERV1 0 826 1 1009 239 12 12 chr5 25750439 25750599 -173879551 - L1MD3 LINE L1 -422 7573 7411 549 205 57 0 chr5 25750601 25750723 -173879427 - MLT1F1 LTR MaLR -436 131 3 26 30 0 0 chr5 25751579 25751612 -173878538 + AT_rich Low_complexity Low_complexity 1 33 0 718 194 46 104 chr5 25752011 25752397 -173877753 + MER89 LTR ERV1 2 460 -99 417 233 75 101 chr5 25753358 25753676 -173876474 + MER46C DNA MER2_type 22 331 -7 21 36 0 0 chr5 25753715 25753743 -173876407 + AT_rich Low_complexity Low_complexity 1 28 0 986 160 6 33 chr5 25753749 25753930 -173876220 + AluJb SINE Alu 136 311 -1 240 122 54 54 chr5 25754446 25754520 -173875630 + (CTATA)n Simple_repeat Simple_repeat 2 75 0 429 168 66 5 chr5 25754524 25754629 -173875521 + L1MB1 LINE L1 6066 6179 -10 1985 154 73 14 chr5 25754696 25755040 -173875110 + THE1B LTR MaLR 1 364 0 4443 194 15 66 chr5 25755078 25756163 -173873987 - L1MA8 LINE L1 -10 6281 5356 1798 206 9 0 chr5 25756163 25756508 -173873642 + MER7A DNA MER2_type 1 346 0 4443 194 15 66 chr5 25756508 25757461 -173872689 - L1MA8 LINE L1 -935 5356 4356 2187 55 7 4 chr5 25757474 25757749 -173872401 - AluY SINE Alu -2 309 34 352 206 9 9 chr5 25757975 25758082 -173872068 + CT-rich Low_complexity Low_complexity 2 108 0 23 54 0 0 chr5 25758561 25758598 -173871552 + AT_rich Low_complexity Low_complexity 1 37 0 182 285 125 75 chr5 25758929 25759129 -173871021 + MIR SINE MIR 50 259 -3 4962 68 36 29 chr5 25759424 25760143 -173870007 + L1PA8 LINE L1 5434 6157 -15 2360 85 0 0 chr5 25760673 25760978 -173869172 + AluY SINE Alu 1 305 -6 531 202 9 26 chr5 25761991 25762105 -173868045 + LOR1a LTR ERV1 386 497 0 1110 256 10 35 chr5 25762139 25762405 -173867745 + AluJo SINE Alu 8 267 -44 2165 95 13 0 chr5 25762405 25762709 -173867441 - AluSp SINE Alu -5 308 1 1110 256 10 35 chr5 25762709 25762753 -173867397 + AluJo SINE Alu 267 311 0 896 326 69 49 chr5 25762835 25763433 -173866717 + L1PBb LINE L1 10 1188 -6397 330 345 34 57 chr5 25763568 25763745 -173866405 + L1PBb LINE L1 1398 1570 -6015 379 314 131 49 chr5 25764369 25764614 -173865536 + L1PBb LINE L1 1532 1796 -5789 373 305 46 23 chr5 25764808 25764982 -173865168 + L1PBb LINE L1 1752 1929 -5656 2466 159 25 82 chr5 25765127 25765688 -173864462 - L1MA9 LINE L1 -1 6311 5783 230 152 0 0 chr5 25765690 25765736 -173864414 + LTR66 LTR ERVL 394 439 -171 621 245 0 0 chr5 25765751 25765898 -173864252 - L1MA9 LINE L1 -519 5793 5647 881 241 150 88 chr5 25766451 25767010 -173863140 - LTR28 LTR ERV1 -426 594 1 209 341 23 0 chr5 25767199 25767287 -173862863 - MIR SINE MIR -119 143 54 247 194 48 16 chr5 25767531 25767593 -173862557 + L1ME LINE L1 5604 5667 -454 21 36 0 0 chr5 25767603 25767631 -173862519 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 25768108 25768138 -173862012 + AT_rich Low_complexity Low_complexity 1 30 0 244 234 78 0 chr5 25768211 25768288 -173861862 + L1ME LINE L1 5513 5595 -526 33 43 0 0 chr5 25769114 25769161 -173860989 + AT_rich Low_complexity Low_complexity 1 47 0 26 50 0 0 chr5 25769454 25769494 -173860656 + AT_rich Low_complexity Low_complexity 1 40 0 22 70 0 0 chr5 25770130 25770173 -173859977 + AT_rich Low_complexity Low_complexity 1 43 0 265 172 31 0 chr5 25770525 25770589 -173859561 - MER52A LTR ERV1 -861 894 829 6808 65 5 1 chr5 25770771 25771972 -173858178 + L1PA7 LINE L1 4936 6141 -13 815 159 22 7 chr5 25772034 25772172 -173857978 + L1PA16 LINE L1 6018 6157 -9 916 186 229 7 chr5 25775308 25775588 -173854562 + MER2 DNA MER2_type 1 342 -2 1965 137 3 13 chr5 25776650 25776963 -173853187 - AluSg SINE Alu 0 310 1 1284 119 0 6 chr5 25776963 25777140 -173853010 - AluSc SINE Alu -20 289 114 1954 9 0 9 chr5 25777625 25777854 -173852296 - L1P1 LINE L1 -567 5588 5362 * 15818 26 1 0 chr5 25777851 25779729 -173850421 + L1P1 LINE L1 3489 5367 -779 22 70 0 0 chr5 25780370 25780413 -173849737 + AT_rich Low_complexity Low_complexity 1 43 0 270 172 31 0 chr5 25780765 25780829 -173849321 - MER52A LTR ERV1 -861 894 829 6851 64 5 1 chr5 25781011 25782212 -173847938 + L1PA7 LINE L1 4936 6141 -13 815 159 22 7 chr5 25782274 25782412 -173847738 + L1PA16 LINE L1 6018 6157 -9 916 186 229 7 chr5 25785548 25785828 -173844322 + MER2 DNA MER2_type 1 342 -2 1965 137 3 13 chr5 25786890 25787203 -173842947 - AluSg SINE Alu 0 310 1 1284 119 0 6 chr5 25787203 25787380 -173842770 - AluSc SINE Alu -20 289 114 1775 165 3 25 chr5 25790075 25790390 -173839760 - AluJb SINE Alu -1 311 4 322 300 0 0 chr5 25790804 25790894 -173839256 + L1MC4 LINE L1 6613 6702 -1340 205 138 0 0 chr5 25790894 25790923 -173839227 + (CA)n Simple_repeat Simple_repeat 1 29 0 428 219 65 0 chr5 25791188 25791311 -173838839 - MER94 DNA DNA -3 131 1 35 54 0 0 chr5 25792339 25792395 -173837755 + AT_rich Low_complexity Low_complexity 1 56 0 276 139 0 0 chr5 25793435 25793478 -173836672 + LTR30 LTR ERV1 1 43 -679 1781 98 29 8 chr5 25793478 25793785 -173836365 + LTR12 LTR ERV1 57 2032 -406 382 211 11 0 chr5 25793786 25793876 -173836274 + LTR30 LTR ERV1 553 643 -79 706 137 0 0 chr5 25793876 25793978 -173836172 + LTR12 LTR ERV1 613 714 0 28038 104 12 26 chr5 25793991 25798190 -173831960 + HERV9 LTR ERV1 40 4182 -4217 2260 170 36 45 chr5 25798190 25798684 -173831466 - LTR2B LTR ERV1 0 490 1 5128 97 14 10 chr5 25798684 25799415 -173830735 - Harlequin LTR ERV1 0 6896 6163 * 25773 75 2 7 chr5 25799403 25802771 -173827379 - Harlequin LTR ERV1 -1727 5169 1818 4557 146 64 30 chr5 25802764 25804111 -173826039 - Harlequin LTR ERV1 -5487 1409 1 * 2349 143 81 66 chr5 25804111 25804594 -173825556 - LTR2B LTR ERV1 0 490 1 5221 119 6 20 chr5 25804594 25805407 -173824743 + HERV17 LTR ERV1 4179 4980 -3419 1841 146 64 98 chr5 25805374 25806294 -173823856 + HERV17 LTR ERV1 703 1740 -5156 * 5655 100 1 0 chr5 25806292 25807062 -173823088 + HERV17 LTR ERV1 7626 8396 -3 548 82 0 0 chr5 25807065 25807138 -173823012 + LTR12 LTR ERV1 209 281 -433 298 274 11 0 chr5 25807138 25807233 -173822917 + LTR30 LTR ERV1 548 643 -79 1691 116 0 0 chr5 25807233 25807466 -173822684 + LTR12 LTR ERV1 480 712 -2 1339 237 90 18 chr5 25808142 25808576 -173821574 - MLT1C LTR MaLR 0 467 3 994 234 25 12 chr5 25808578 25808822 -173821328 - MLT1C-int LTR MaLR 0 1371 1125 249 167 17 17 chr5 25809025 25809085 -173821065 - MLT1C-int LTR MaLR -484 887 828 * 1925 235 13 17 chr5 25809082 25809542 -173820608 - MLT1C-int LTR MaLR -667 704 247 23 0 0 0 chr5 25809600 25809623 -173820527 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr5 25810766 25810809 -173819341 + AT_rich Low_complexity Low_complexity 1 43 0 270 274 145 64 chr5 25813152 25813386 -173816764 - L3 LINE CR1 -187 1390 1138 244 321 12 0 chr5 25813733 25813817 -173816333 + (TA)n Simple_repeat Simple_repeat 2 86 0 25 0 0 0 chr5 25813871 25813896 -173816254 + AT_rich Low_complexity Low_complexity 1 25 0 220 255 32 32 chr5 25814791 25814885 -173815265 + (TATATG)n Simple_repeat Simple_repeat 5 98 0 29 28 0 0 chr5 25814970 25815006 -173815144 + AT_rich Low_complexity Low_complexity 1 36 0 1942 120 25 0 chr5 25815211 25815511 -173814639 + AluSx SINE Alu 1 307 0 25 51 0 0 chr5 25815575 25815614 -173814536 + AT_rich Low_complexity Low_complexity 1 39 0 325 248 124 55 chr5 25816224 25816442 -173813708 + L1M4 LINE L1 4354 4586 -1560 644 170 28 0 chr5 25816473 25816579 -173813571 - FLAM_C SINE Alu -32 111 3 22 0 0 0 chr5 25816840 25816862 -173813288 + AT_rich Low_complexity Low_complexity 1 22 0 283 315 14 7 chr5 25817108 25817251 -173812899 + L1M4 LINE L1 2686 2829 -3317 2409 57 14 14 chr5 25817563 25817860 -173812290 + AluY SINE Alu 1 297 -14 344 333 87 26 chr5 25818520 25818911 -173811239 + L1M4 LINE L1 4233 4647 -1499 320 319 65 18 chr5 25819572 25819808 -173810342 - L1ME LINE L1 -517 5653 5401 27 49 0 0 chr5 25820110 25820151 -173809999 + AT_rich Low_complexity Low_complexity 1 41 0 490 304 103 0 chr5 25820167 25820371 -173809779 - MIR SINE MIR -19 243 19 1803 188 18 18 chr5 25820556 25820945 -173809205 - L1MA6 LINE L1 0 7362 6974 6503 180 49 5 chr5 25820990 25821019 -173809131 - L1MA6 LINE L1 -694 6668 6642 2912 176 177 16 chr5 25821019 25821730 -173808420 - LTR1B LTR ERV1 0 826 1 6503 180 49 5 chr5 25821730 25822624 -173807526 - L1MA6 LINE L1 -720 6642 5641 222 37 0 0 chr5 25822624 25822651 -173807499 + (TG)n Simple_repeat Simple_repeat 2 28 0 6503 180 49 5 chr5 25822651 25823314 -173806836 - L1MA6 LINE L1 -1721 5641 5009 6105 256 61 28 chr5 25823321 25824069 -173806081 - L1MA6 LINE L1 -2309 4899 4177 2287 88 0 3 chr5 25824069 25824385 -173805765 - AluSc SINE Alu 0 315 1 6105 256 61 28 chr5 25824385 25825493 -173804657 - L1MA6 LINE L1 -3031 4177 3107 1287 225 10 50 chr5 25825493 25825650 -173804500 - AluJo SINE Alu -24 288 147 2067 92 0 66 chr5 25825650 25825967 -173804183 - AluY SINE Alu -15 296 1 1287 225 10 50 chr5 25825967 25826107 -173804043 - AluJo SINE Alu -165 147 3 6105 256 61 28 chr5 25826107 25828305 -173801845 - L1MA6 LINE L1 -4101 3107 168 22 0 0 0 chr5 25829023 25829045 -173801105 + AT_rich Low_complexity Low_complexity 1 22 0 36 62 0 0 chr5 25829374 25829438 -173800712 + AT_rich Low_complexity Low_complexity 1 64 0 34 0 0 0 chr5 25829789 25829823 -173800327 + AT_rich Low_complexity Low_complexity 1 34 0 22 70 0 0 chr5 25829879 25829922 -173800228 + AT_rich Low_complexity Low_complexity 1 43 0 26 0 0 0 chr5 25830029 25830055 -173800095 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chr5 25830204 25830239 -173799911 + AT_rich Low_complexity Low_complexity 1 35 0 2119 119 3 0 chr5 25830585 25830895 -173799255 - AluSp SINE Alu -2 311 1 1406 72 0 6 chr5 25831026 25831207 -173798943 - AluSg/x SINE Alu -7 305 126 440 93 0 0 chr5 25831212 25831287 -173798863 + Alu SINE Alu 236 310 0 415 333 53 22 chr5 25831919 25832147 -173798003 + MIR SINE MIR 10 244 -18 271 246 0 0 chr5 25832710 25832767 -173797383 + MER4-int LTR ERV1 1113 1169 -5429 504 125 12 0 chr5 25833217 25833297 -173796853 + MER67D LTR ERV1 1 81 -433 1077 231 108 10 chr5 25833334 25833641 -173796509 + MER67C LTR ERV1 67 403 -307 329 282 73 0 chr5 25833644 25833754 -173796396 - LTR16B LTR ERVL -239 225 108 662 352 35 41 chr5 25833929 25834742 -173795408 - HERVL LTR ERVL -289 5365 4234 295 295 63 11 chr5 25834924 25835019 -173795131 - HERVL LTR ERVL -1161 4324 4225 2921 221 26 10 chr5 25835445 25836070 -173794080 - MER39 LTR ERV1 0 707 73 1198 267 124 32 chr5 25836241 25836773 -173793377 - L1ME3A LINE L1 -10 6160 5580 892 294 73 47 chr5 25836784 25837029 -173793121 - L1ME3A LINE L1 -2908 3238 3001 2194 105 26 76 chr5 25837029 25837410 -173792740 - THE1B LTR MaLR -2 362 1 892 294 73 47 chr5 25837410 25837487 -173792663 - L1ME3A LINE L1 -3145 3001 2928 2214 110 0 3 chr5 25837487 25837779 -173792371 - AluSc SINE Alu -18 291 1 892 294 73 47 chr5 25837779 25838272 -173791878 - L1ME3A LINE L1 -3218 2928 2400 2097 112 7 3 chr5 25839113 25839416 -173790734 - AluSp SINE Alu -9 304 1 1823 131 0 0 chr5 25840658 25840925 -173789225 + AluSx SINE Alu 46 312 0 22 0 0 0 chr5 25841059 25841081 -173789069 + AT_rich Low_complexity Low_complexity 1 22 0 2279 114 0 0 chr5 25841541 25841847 -173788303 + AluSq SINE Alu 1 306 -7 1317 252 24 24 chr5 25842199 25842572 -173787578 - LTR40a LTR ERVL -49 470 98 258 32 0 0 chr5 25844563 25844594 -173785556 + (TG)n Simple_repeat Simple_repeat 2 32 0 1552 194 69 3 chr5 25844595 25844914 -173785236 + MER2 DNA MER2_type 1 340 -4 309 322 123 17 chr5 25844957 25845193 -173784957 - L1MC4a LINE L1 -1941 5867 5607 306 271 16 70 chr5 25846299 25846428 -173783722 - MIR SINE MIR -41 221 100 25 65 0 0 chr5 25847156 25847202 -173782948 + AT_rich Low_complexity Low_complexity 1 46 0 2408 78 0 0 chr5 25847352 25847658 -173782492 - AluY SINE Alu -4 307 2 230 311 31 66 chr5 25848043 25848239 -173781911 + MIR SINE MIR 3 191 -71 180 179 0 0 chr5 25848702 25848741 -173781409 + CT-rich Low_complexity Low_complexity 2 40 0 2092 72 4 0 chr5 25848760 25849037 -173781113 - L1PA8 LINE L1 -20 6152 5875 2115 154 0 61 chr5 25849037 25849283 -173780867 - Tigger2 DNA MER2_type -2 2716 2502 2082 86 7 7 chr5 25849283 25849586 -173780564 + AluSc SINE Alu 1 303 0 2115 154 0 61 chr5 25849586 25849746 -173780404 - Tigger2 DNA MER2_type -216 2502 2334 245 128 21 0 chr5 25849781 25849828 -173780322 + (TG)n Simple_repeat Simple_repeat 2 49 0 1493 176 50 58 chr5 25849829 25850188 -173779962 - MLT2C1 LTR ERVL -41 356 1 21 0 0 0 chr5 25851581 25851602 -173778548 + AT_rich Low_complexity Low_complexity 1 21 0 2173 116 0 0 chr5 25851952 25852262 -173777888 - AluSx SINE Alu -2 310 1 190 283 0 0 chr5 25852497 25852543 -173777607 - L2 LINE L2 -1 3271 3226 28 29 0 0 chr5 25853792 25853827 -173776323 + AT_rich Low_complexity Low_complexity 1 35 0 188 317 72 113 chr5 25853856 25854006 -173776144 + L2 LINE L2 2405 2560 -754 1940 197 7 31 chr5 25854006 25854427 -173775723 - LTR57 LTR ERVL 0 411 1 188 317 72 113 chr5 25854427 25854639 -173775511 + L2 LINE L2 2560 2752 -562 1226 176 9 0 chr5 25855390 25855606 -173774544 - L1MC1 LINE L1 -5 6328 6111 217 118 39 0 chr5 25855613 25855664 -173774486 + (TA)n Simple_repeat Simple_repeat 2 54 0 956 124 0 0 chr5 25855664 25855793 -173774357 - AluSg/x SINE Alu -24 288 160 2170 94 4 0 chr5 25855793 25856069 -173774081 - AluSp SINE Alu -36 277 1 522 0 0 0 chr5 25856071 25856129 -173774021 + (TA)n Simple_repeat Simple_repeat 1 58 0 2826 170 45 11 chr5 25856136 25856670 -173773480 - L1MC1 LINE L1 -244 6089 5538 4602 95 30 95 chr5 25857239 25858073 -173772077 - LTR17 LTR ERV1 0 780 1 2862 9 0 0 chr5 25859061 25859377 -173770773 + AluYb8 SINE Alu 1 316 -2 268 374 9 9 chr5 25859573 25859680 -173770470 + MIR SINE MIR 8 114 -148 1284 261 123 66 chr5 25859741 25860206 -173769944 + L1ME2 LINE L1 3831 4268 -1878 1870 154 3 3 chr5 25860206 25860491 -173769659 + AluJb SINE Alu 2 286 -26 414 0 0 0 chr5 25860498 25860544 -173769606 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1284 261 123 66 chr5 25860544 25861306 -173768844 + L1ME2 LINE L1 4273 5136 -1010 1734 265 77 17 chr5 25861339 25861974 -173768176 + L1ME2 LINE L1 5377 6049 -115 5624 130 31 27 chr5 25861974 25862300 -173767850 - Tigger1 DNA MER2_type 0 2418 2095 1253 158 74 87 chr5 25862300 25862598 -173767552 - AluSq SINE Alu -16 297 4 5624 130 31 27 chr5 25862598 25863060 -173767090 - Tigger1 DNA MER2_type -323 2095 1623 1840 136 7 33 chr5 25863060 25863362 -173766788 - AluSc SINE Alu -15 294 1 5624 130 31 27 chr5 25863362 25863565 -173766585 - Tigger1 DNA MER2_type -795 1623 1422 451 129 14 0 chr5 25863583 25863653 -173766497 + Tigger1 DNA MER2_type 1107 1177 -1241 7456 156 34 39 chr5 25863720 25864018 -173766132 - Tigger1 DNA MER2_type -954 1464 1166 1292 215 0 39 chr5 25864018 25864325 -173765825 - AluJo SINE Alu -17 295 1 7456 156 34 39 chr5 25864325 25864888 -173765262 - Tigger1 DNA MER2_type -1252 1166 601 2126 54 0 11 chr5 25864888 25865165 -173764985 - L1PA5 LINE L1 -1 6153 5880 7456 156 34 39 chr5 25865165 25865747 -173764403 - Tigger1 DNA MER2_type -1817 601 28 293 313 15 0 chr5 25865928 25866062 -173764088 + (TA)n Simple_repeat Simple_repeat 2 137 0 241 345 17 17 chr5 25867495 25867614 -173762536 + L2 LINE L2 3192 3310 -3 206 238 38 62 chr5 25868018 25868098 -173762052 - MIR3 SINE MIR -40 168 91 1731 122 93 4 chr5 25868110 25868380 -173761770 - AluSx SINE Alu -18 294 1 22 80 0 0 chr5 25868468 25868518 -173761632 + AT_rich Low_complexity Low_complexity 1 50 0 2351 171 24 14 chr5 25869253 25869675 -173760475 - MSTB LTR MaLR 0 426 1 1175 224 79 65 chr5 25869834 25870326 -173759824 + MLT1D LTR MaLR 5 503 -2 2816 113 30 38 chr5 25870581 25871050 -173759100 + MER4C LTR ERV1 1 465 0 478 321 58 74 chr5 25871095 25871178 -173758972 + HAL1b LINE L1 42 125 -1223 2317 156 11 36 chr5 25871178 25871620 -173758530 + MER61C LTR ERV1 1 431 -3 478 321 58 74 chr5 25871620 25872056 -173758094 + HAL1b LINE L1 125 364 -984 3019 203 21 89 chr5 25872056 25873095 -173757055 + LTR5 LTR ERVK 1 968 -1 478 321 58 74 chr5 25873095 25873157 -173756993 + HAL1b LINE L1 364 425 -923 348 250 111 32 chr5 25874017 25874354 -173755796 + L1 LINE L1 2214 2573 -3573 302 271 28 14 chr5 25874586 25874730 -173755420 + (TATATG)n Simple_repeat Simple_repeat 5 150 0 23 33 0 0 chr5 25874770 25874800 -173755350 + AT_rich Low_complexity Low_complexity 1 30 0 25 65 0 0 chr5 25874851 25874897 -173755253 + AT_rich Low_complexity Low_complexity 1 46 0 2231 116 3 0 chr5 25874916 25875226 -173754924 - AluSp SINE Alu 0 313 3 488 267 38 15 chr5 25876257 25876388 -173753762 + MIR SINE MIR 24 157 -105 2025 138 3 0 chr5 25877316 25877621 -173752529 + AluSx SINE Alu 1 306 -6 684 287 78 4 chr5 25878309 25878539 -173751611 + MIR SINE MIR 15 261 -1 320 244 35 29 chr5 25880427 25880599 -173749551 + (TA)n Simple_repeat Simple_repeat 2 174 0 1039 189 75 137 chr5 25880965 25881461 -173748689 - MER4C LTR ERV1 0 465 1 3859 186 28 18 chr5 25881503 25882325 -173747825 - MER4C-int LTR ERV1 -1023 5308 4479 2676 211 83 67 chr5 25882306 25883191 -173746959 - MER4C-int LTR ERV1 -2023 4763 3893 * 207 100 0 0 chr5 25883191 25883221 -173746929 + (CTTA)n Simple_repeat Simple_repeat 2 31 0 1764 181 0 0 chr5 25883221 25883502 -173746648 - AluSx SINE Alu -29 283 3 2676 211 83 67 chr5 25883502 25884442 -173745708 - MER4C-int LTR ERV1 -2892 3894 1603 1280 229 45 138 chr5 25884458 25885173 -173744977 - MER4C-int LTR ERV1 -4530 3007 2360 1307 198 104 45 chr5 25885292 25885666 -173744484 - MER4C-int LTR ERV1 -4942 1389 994 1928 140 0 10 chr5 25885891 25886183 -173743967 + AluSx SINE Alu 1 289 -23 219 23 93 0 chr5 25886190 25886233 -173743917 + (CAAA)n Simple_repeat Simple_repeat 4 50 0 549 121 43 26 chr5 25886396 25886512 -173743638 - MER4C-int LTR ERV1 -6346 252 135 1150 234 72 34 chr5 25886641 25886845 -173743305 - MER4C LTR ERV1 -4 461 266 2135 105 3 16 chr5 25886845 25887149 -173743001 - AluSx SINE Alu -10 302 3 1150 234 72 34 chr5 25887149 25887388 -173742762 - MER4C LTR ERV1 -199 266 1 2347 141 61 4 chr5 25887817 25888277 -173741873 - LTR19A LTR ERV1 0 486 1 725 324 161 43 chr5 25888430 25889320 -173740830 - L2 LINE L2 -1 3312 2320 241 269 21 0 chr5 25890672 25890765 -173739385 + (TA)n Simple_repeat Simple_repeat 1 95 0 1575 181 30 20 chr5 25891112 25891230 -173738920 + AluJb SINE Alu 7 122 -190 365 38 57 0 chr5 25891230 25891283 -173738867 + A-rich Low_complexity Low_complexity 5 60 0 1575 181 30 20 chr5 25891283 25891467 -173738683 + AluJb SINE Alu 122 312 0 199 366 0 14 chr5 25891569 25891640 -173738510 + L2 LINE L2 3239 3308 -5 34 24 0 0 chr5 25893511 25893552 -173736598 + AT_rich Low_complexity Low_complexity 1 41 0 289 351 37 21 chr5 25896319 25896507 -173733643 + MIR SINE MIR 58 248 -14 22 0 0 0 chr5 25896707 25896729 -173733421 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 25896817 25896842 -173733308 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr5 25898297 25898334 -173731816 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 25899015 25899036 -173731114 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 25899544 25899566 -173730584 + AT_rich Low_complexity Low_complexity 1 22 0 25 65 0 0 chr5 25900081 25900127 -173730023 + AT_rich Low_complexity Low_complexity 1 46 0 37 62 0 0 chr5 25901089 25901154 -173728996 + AT_rich Low_complexity Low_complexity 1 65 0 2024 101 9 32 chr5 25901958 25902274 -173727876 + AluSc SINE Alu 1 309 0 26 64 0 0 chr5 25902659 25902706 -173727444 + AT_rich Low_complexity Low_complexity 1 47 0 200 59 29 0 chr5 25905300 25905334 -173724816 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 372 178 0 0 chr5 25905341 25905414 -173724736 - LTR30 LTR ERV1 -98 624 552 2079 127 0 3 chr5 25905807 25906098 -173724052 + AluSx SINE Alu 7 296 -16 22 0 0 0 chr5 25906127 25906149 -173724001 + AT_rich Low_complexity Low_complexity 1 22 0 409 340 54 33 chr5 25906905 25907146 -173723004 + MIR SINE MIR 16 261 -1 2145 71 0 14 chr5 25908324 25908619 -173721531 - AluY SINE Alu -20 291 1 561 258 71 7 chr5 25909801 25909956 -173720194 + MER45A DNA AcHobo 1 165 -13 378 271 28 9 chr5 25910074 25910181 -173719969 + MIR SINE MIR 49 157 -105 321 252 56 19 chr5 25910256 25910363 -173719787 + MIR SINE MIR 114 224 -38 24 53 0 0 chr5 25910444 25910482 -173719668 + AT_rich Low_complexity Low_complexity 1 38 0 1755 205 92 66 chr5 25910493 25910910 -173719240 + MER34 LTR ERV1 26 460 -82 2615 42 3 0 chr5 25910910 25911220 -173718930 - AluY SINE Alu 0 311 1 1755 205 92 66 chr5 25911220 25911305 -173718845 + MER34 LTR ERV1 460 541 -1 2112 120 7 7 chr5 25912229 25912537 -173717613 + AluSg SINE Alu 1 308 -2 26 0 0 0 chr5 25913584 25913610 -173716540 + AT_rich Low_complexity Low_complexity 1 26 0 218 95 40 68 chr5 25913738 25913812 -173716338 + (TATAA)n Simple_repeat Simple_repeat 1 72 0 1542 168 6 84 chr5 25914154 25914488 -173715662 - MER1B DNA MER1_type 0 339 32 757 225 23 74 chr5 25914496 25914834 -173715316 - L1MC/D LINE L1 -743 5403 5220 2029 126 13 3 chr5 25914834 25915144 -173715006 - AluSq SINE Alu 0 313 1 757 225 23 74 chr5 25915144 25915279 -173714871 - L1MC/D LINE L1 -926 5220 5080 423 0 0 0 chr5 25915621 25915668 -173714482 + (TG)n Simple_repeat Simple_repeat 1 47 0 300 268 29 36 chr5 25915696 25915834 -173714316 - HAL1 LINE L1 -885 1622 1486 21 36 0 0 chr5 25916027 25916055 -173714095 + AT_rich Low_complexity Low_complexity 1 28 0 435 313 62 35 chr5 25916538 25916765 -173713385 - LTR40a LTR ERVL -42 477 245 21 0 0 0 chr5 25917566 25917587 -173712563 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 25917699 25917721 -173712429 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr5 25917873 25917913 -173712237 + AT_rich Low_complexity Low_complexity 1 40 0 27 81 0 0 chr5 25919625 25919687 -173710463 + AT_rich Low_complexity Low_complexity 1 62 0 24 67 0 0 chr5 25920309 25920354 -173709796 + AT_rich Low_complexity Low_complexity 1 45 0 459 0 0 0 chr5 25921348 25921399 -173708751 + (TG)n Simple_repeat Simple_repeat 2 52 0 193 289 55 55 chr5 25921695 25921823 -173708327 - MIR SINE MIR -46 216 89 444 314 78 25 chr5 25922072 25922276 -173707874 + MIR SINE MIR 48 262 0 24 0 0 0 chr5 25922497 25922521 -173707629 + AT_rich Low_complexity Low_complexity 1 24 0 208 357 0 0 chr5 25923579 25923657 -173706493 - MIR SINE MIR -76 132 54 331 323 21 27 chr5 25923765 25923951 -173706199 + L1ME2 LINE L1 4007 4191 -1955 960 297 94 41 chr5 25924025 25924616 -173705534 - L1MC4 LINE L1 -142 7900 7273 2080 54 12 75 chr5 25924616 25924948 -173705202 + AluY SINE Alu 1 311 0 960 297 94 41 chr5 25924948 25924985 -173705165 - L1MC4 LINE L1 -769 7273 7239 1081 250 105 10 chr5 25924992 25925376 -173704774 - L1MD3 LINE L1 -943 7071 6664 450 306 49 0 chr5 25925744 25925927 -173704223 - L1MC4 LINE L1 -1393 6649 6458 1250 254 73 45 chr5 25926307 25926700 -173703450 + L1ME2 LINE L1 4147 4527 -1637 1181 212 53 70 chr5 25926700 25926904 -173703246 + MLT1B LTR MaLR 1 196 -194 210 91 0 0 chr5 25926904 25926937 -173703213 + (CA)n Simple_repeat Simple_repeat 1 33 0 1181 212 53 70 chr5 25926937 25927129 -173703021 + MLT1B LTR MaLR 196 390 0 1250 254 73 45 chr5 25927129 25927187 -173702963 + L1ME2 LINE L1 4527 4582 -1582 2021 142 3 0 chr5 25927187 25927490 -173702660 - AluSx SINE Alu -8 304 1 1250 254 73 45 chr5 25927490 25928936 -173701214 + L1ME2 LINE L1 4582 6154 -10 2764 176 45 35 chr5 25929445 25929974 -173700176 + L1MB4 LINE L1 5300 5892 -288 2046 129 0 0 chr5 25929974 25930268 -173699882 + AluSg SINE Alu 3 296 -14 2764 176 45 35 chr5 25930268 25930558 -173699592 + L1MB4 LINE L1 5892 6178 -2 30 0 7 0 chr5 25930741 25930809 -173699341 + AT_rich Low_complexity Low_complexity 1 30 0 2078 97 7 10 chr5 25930909 25931208 -173698942 - AluSx SINE Alu -14 298 1 394 328 109 0 chr5 25931550 25931733 -173698417 + LTR16A LTR ERVL 196 398 -52 183 80 0 0 chr5 25931794 25931819 -173698331 + (TA)n Simple_repeat Simple_repeat 2 26 0 804 228 46 20 chr5 25932733 25932930 -173697220 + MER63A DNA MER1_type 7 208 -2 231 204 0 0 chr5 25933930 25933984 -173696166 + A-rich Low_complexity Low_complexity 1 54 0 2525 46 0 0 chr5 25934420 25934724 -173695426 + AluY SINE Alu 1 304 -7 287 206 46 15 chr5 25934767 25934898 -173695252 + (TA)n Simple_repeat Simple_repeat 2 136 0 2356 45 0 7 chr5 25934898 25935186 -173694964 - AluY SINE Alu -25 286 1 2067 217 67 22 chr5 25935186 25935720 -173694430 + Tigger6a DNA MER2_type 103 660 -423 376 265 80 10 chr5 25935753 25935953 -173694197 + L1MEc LINE L1 2070 2283 -4113 1887 127 34 0 chr5 25936092 25936383 -173693767 + AluSq SINE Alu 13 313 0 2925 234 93 25 chr5 25937340 25938309 -173691841 + L1MC3 LINE L1 6137 6344 0 350 310 66 40 chr5 25939633 25940237 -173689913 + L1MEc LINE L1 3612 4231 -1984 249 146 0 0 chr5 25940238 25940286 -173689864 + (TA)n Simple_repeat Simple_repeat 2 49 0 905 310 165 36 chr5 25940286 25941015 -173689135 + L2 LINE L2 1709 2531 -783 671 76 0 0 chr5 25941040 25941132 -173689018 - L1PA13 LINE L1 -4 6159 6068 316 375 11 11 chr5 25941169 25941353 -173688797 - L1M4 LINE L1 -2420 3726 3543 476 78 16 0 chr5 25941376 25941462 -173688688 - L1PA12 LINE L1 -41 6120 6031 783 285 46 54 chr5 25941462 25941559 -173688591 + L2 LINE L2 2703 2799 -514 1924 221 88 7 chr5 25941559 25942024 -173688126 - MLT1D LTR MaLR -2 503 1 783 285 46 54 chr5 25942024 25942513 -173687637 + L2 LINE L2 2799 3287 -26 226 236 70 16 chr5 25942878 25942980 -173687170 + L1ME LINE L1 5517 5603 -559 1512 208 20 10 chr5 25943999 25944292 -173685858 - AluJo SINE Alu -16 296 1 2385 75 3 3 chr5 25944707 25945012 -173685138 - AluSg SINE Alu -5 305 1 480 18 0 0 chr5 25947009 25947066 -173683084 + (GA)n Simple_repeat Simple_repeat 2 58 0 2262 113 0 14 chr5 25947275 25947628 -173682522 + L1PA13 LINE L1 5811 6158 -5 186 43 0 0 chr5 25947645 25947668 -173682482 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 460 206 98 10 chr5 25947670 25947772 -173682378 - FLAM_A SINE Alu -18 115 5 1911 141 23 3 chr5 25948487 25948792 -173681358 - AluSx SINE Alu -1 311 1 818 192 7 0 chr5 25948919 25949070 -173681080 + MLT1B LTR MaLR 239 390 0 328 299 45 8 chr5 25949245 25949379 -173680771 + L2 LINE L2 2935 3073 -240 26 50 0 0 chr5 25949540 25949580 -173680570 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr5 25950284 25950305 -173679845 + AT_rich Low_complexity Low_complexity 1 21 0 257 307 47 13 chr5 25950384 25950534 -173679616 + L1M4 LINE L1 2676 2830 -3316 23 33 0 0 chr5 25950562 25950592 -173679558 + AT_rich Low_complexity Low_complexity 1 30 0 2863 242 54 29 chr5 25951050 25951197 -173678953 - L1MC4a LINE L1 -148 7660 7518 2442 101 31 6 chr5 25951197 25951552 -173678598 + THE1B LTR MaLR 1 364 0 2863 242 54 29 chr5 25951552 25952330 -173677820 - L1MC4a LINE L1 -290 7518 6712 302 302 50 43 chr5 25952769 25953047 -173677103 + L1MC4 LINE L1 6759 7038 -1004 390 269 0 0 chr5 25953844 25953989 -173676161 + (TA)n Simple_repeat Simple_repeat 1 145 0 2087 144 0 0 chr5 25954358 25954664 -173675486 - AluSx SINE Alu -6 306 1 21 0 0 0 chr5 25954727 25954748 -173675402 + AT_rich Low_complexity Low_complexity 1 21 0 366 322 40 17 chr5 25954980 25955254 -173674896 + L1MC4a LINE L1 5297 5576 -586 987 226 160 34 chr5 25955255 25955636 -173674514 - MLT1C LTR MaLR -5 462 34 300 308 33 34 chr5 25955661 25955908 -173674242 + L1MC4a LINE L1 5707 5956 -208 1563 156 92 18 chr5 25956197 25956479 -173673671 - AluSx SINE Alu -9 303 1 1187 113 6 0 chr5 25956736 25956895 -173673255 + AluSp SINE Alu 1 160 -153 1364 92 63 24 chr5 25956898 25957104 -173673046 + AluSp SINE Alu 88 301 -12 2037 114 7 0 chr5 25957472 25957796 -173672354 + AluSg SINE Alu 1 326 0 394 318 98 18 chr5 25957829 25958106 -173672044 + HAL1 LINE L1 1487 1785 -722 297 0 0 0 chr5 25958107 25958140 -173672010 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 217 238 0 0 chr5 25958956 25958998 -173671152 + (CATA)n Simple_repeat Simple_repeat 2 43 0 23 33 0 0 chr5 25959010 25959040 -173671110 + AT_rich Low_complexity Low_complexity 1 30 0 371 264 14 0 chr5 25962750 25963042 -173667108 + (TA)n Simple_repeat Simple_repeat 1 296 0 1999 132 48 6 chr5 25963061 25963394 -173666756 - MER7A DNA MER2_type -1 345 1 186 103 0 0 chr5 25963469 25963498 -173666652 + (TG)n Simple_repeat Simple_repeat 2 30 0 288 237 0 0 chr5 25963612 25963671 -173666479 + L2 LINE L2 3214 3272 0 261 358 28 39 chr5 25964472 25964572 -173665578 + MIR SINE MIR 55 154 -108 391 75 194 0 chr5 25964572 25964639 -173665511 + MADE1 DNA Mariner 1 80 0 261 358 28 39 chr5 25964639 25964717 -173665433 + MIR SINE MIR 154 231 -31 189 74 0 0 chr5 25965628 25965655 -173664495 + (T)n Simple_repeat Simple_repeat 1 27 0 257 351 58 27 chr5 25966598 25966823 -173663327 + L2 LINE L2 2828 3059 -213 2629 97 6 0 chr5 25967038 25967400 -173662750 - THE1B LTR MaLR 0 364 1 590 242 95 57 chr5 25967485 25967696 -173662454 - MER20 DNA MER1_type 0 219 1 183 80 0 0 chr5 25967871 25967896 -173662254 + (TAA)n Simple_repeat Simple_repeat 2 26 0 228 345 86 36 chr5 25967908 25968128 -173662022 - MIR SINE MIR -5 257 27 505 186 99 88 chr5 25968131 25968394 -173661756 + MER33 DNA MER1_type 1 266 -58 241 295 9 36 chr5 25968394 25968506 -173661644 + MIR SINE MIR 104 212 -50 1391 138 5 5 chr5 25968738 25968990 -173661160 + AluSg/x SINE Alu 76 327 0 209 189 0 0 chr5 25970647 25970684 -173659466 + T-rich Low_complexity Low_complexity 4 40 0 567 264 50 0 chr5 25973844 25974003 -173656147 - MER115 DNA AcHobo -8 685 519 339 381 34 53 chr5 25974216 25974481 -173655669 - MER115 DNA AcHobo -366 327 68 29 0 0 0 chr5 25975020 25975049 -173655101 + AT_rich Low_complexity Low_complexity 1 29 0 1937 186 5 22 chr5 25977994 25978027 -173652123 - MLT1A1 LTR MaLR -1 364 332 1873 155 77 0 chr5 25978027 25978350 -173651800 + MER7A DNA MER2_type 1 346 0 1937 186 5 22 chr5 25978350 25978686 -173651464 - MLT1A1 LTR MaLR -33 332 1 2142 112 0 0 chr5 25979718 25980014 -173650136 + AluSc SINE Alu 1 296 -13 964 205 81 77 chr5 25981238 25981535 -173648615 + AluJo SINE Alu 1 298 -4 189 0 0 0 chr5 25981886 25981907 -173648243 + (TG)n Simple_repeat Simple_repeat 2 22 0 318 294 22 7 chr5 25982254 25982390 -173647760 + (TA)n Simple_repeat Simple_repeat 1 138 0 1750 197 16 94 chr5 25983675 25983827 -173646323 - MLT2C2 LTR ERVL -60 404 242 1948 131 27 3 chr5 25983827 25984125 -173646025 - AluSx SINE Alu -7 305 1 1750 197 16 94 chr5 25984125 25984408 -173645742 - MLT2C2 LTR ERVL -222 242 3 505 282 79 71 chr5 25984596 25985256 -173644894 + L1MEc LINE L1 901 1571 -4825 2298 100 0 0 chr5 25985256 25985555 -173644595 - AluSq SINE Alu -14 299 1 505 282 79 71 chr5 25985555 25985804 -173644346 + L1MEc LINE L1 1571 1817 -4579 279 256 39 0 chr5 25985920 25985998 -173644152 + L1ME3A LINE L1 6086 6166 -4 734 354 114 13 chr5 25986307 25986850 -173643300 + L2 LINE L2 2383 2977 -295 321 307 52 16 chr5 25986955 25987206 -173642944 - L1M4 LINE L1 -871 5275 5016 25 31 0 0 chr5 25987980 25988012 -173642138 + AT_rich Low_complexity Low_complexity 1 32 0 280 299 103 39 chr5 25988336 25988617 -173641533 - HAL1 LINE L1 -448 2059 1761 819 284 52 31 chr5 25988703 25989221 -173640929 - HAL1 LINE L1 -934 1573 1045 272 291 77 8 chr5 25989245 25989362 -173640788 + MLT1G1 LTR MaLR 1 125 -470 250 218 109 24 chr5 25989361 25989458 -173640692 + MLT1F1 LTR MaLR 9 119 -411 * 242 29 29 0 chr5 25989669 25989704 -173640446 + (GA)n Simple_repeat Simple_repeat 2 37 0 22 0 0 0 chr5 25989967 25989989 -173640161 + AT_rich Low_complexity Low_complexity 1 22 0 362 306 142 27 chr5 25990045 25990567 -173639583 + L1MC4a LINE L1 5313 5894 -1914 21 0 0 0 chr5 25990781 25990802 -173639348 + AT_rich Low_complexity Low_complexity 1 21 0 2235 105 0 0 chr5 25990982 25991286 -173638864 - AluSg1 SINE Alu -5 304 1 2004 119 3 10 chr5 25991779 25991819 -173638331 - AluSc SINE Alu 0 309 270 207 0 0 0 chr5 25991819 25991842 -173638308 + (GA)n Simple_repeat Simple_repeat 1 23 0 2004 119 3 10 chr5 25991842 25992112 -173638038 - AluSc SINE Alu -39 270 1 1727 178 7 3 chr5 25992191 25992489 -173637661 - AluJo SINE Alu -13 299 1 2125 100 0 4 chr5 25992786 25993067 -173637083 - AluSq SINE Alu -33 280 1 2171 110 0 16 chr5 25993778 25994086 -173636064 - AluSq SINE Alu -8 305 3 185 94 31 0 chr5 25994141 25994173 -173635977 + (TAA)n Simple_repeat Simple_repeat 1 33 0 2542 40 0 0 chr5 25994184 25994487 -173635663 - AluY SINE Alu -8 303 1 181 284 171 0 chr5 25996423 25996511 -173633639 + L2 LINE L2 3170 3272 0 26 88 0 0 chr5 25997625 25997693 -173632457 + AT_rich Low_complexity Low_complexity 1 68 0 226 382 99 8 chr5 25997784 25997915 -173632235 - MIR3 SINE MIR -60 148 6 207 100 0 0 chr5 26000247 26000277 -173629873 + (TA)n Simple_repeat Simple_repeat 2 31 0 183 42 0 0 chr5 26000960 26000984 -173629166 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 243 0 0 0 chr5 26001446 26001473 -173628677 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 704 266 73 68 chr5 26001599 26002097 -173628053 + L2 LINE L2 2531 3034 -279 198 0 0 0 chr5 26002131 26002153 -173627997 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 251 355 11 0 chr5 26002183 26002276 -173627874 + L2 LINE L2 3205 3298 -15 186 103 0 0 chr5 26002276 26002305 -173627845 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 269 256 104 76 chr5 26002315 26002565 -173627585 + MER20B DNA MER1_type 519 775 -8 23 33 0 0 chr5 26004432 26004462 -173625688 + AT_rich Low_complexity Low_complexity 1 30 0 304 250 76 22 chr5 26004595 26004687 -173625463 - MER5A DNA MER1_type -83 106 10 27 0 0 0 chr5 26005278 26005305 -173624845 + AT_rich Low_complexity Low_complexity 1 27 0 209 346 0 26 chr5 26007832 26007910 -173622240 - L2 LINE L2 -181 3091 3016 225 94 0 0 chr5 26007935 26007967 -173622183 + (TG)n Simple_repeat Simple_repeat 2 33 0 896 198 71 45 chr5 26008275 26008543 -173621607 + ORSL DNA AcHobo 1 275 0 289 263 61 20 chr5 26008621 26008720 -173621430 - MIR SINE MIR -71 137 35 1772 244 61 56 chr5 26010631 26011421 -173618729 + L1ME1 LINE L1 3599 4395 -1751 1525 201 10 3 chr5 26011421 26011715 -173618435 + AluJo SINE Alu 12 307 -5 1772 244 61 56 chr5 26011715 26011781 -173618369 + L1ME1 LINE L1 4395 4459 -1687 2259 293 49 62 chr5 26011799 26011934 -173618216 + L1ME1 LINE L1 5080 5215 -951 2055 115 13 3 chr5 26011934 26012238 -173617912 + AluSq SINE Alu 1 307 -6 2259 293 49 62 chr5 26012238 26013189 -173616961 + L1ME1 LINE L1 5215 6155 -11 610 157 28 0 chr5 26013191 26013299 -173616851 + L1M2 LINE L1 5363 5473 -839 2272 115 0 0 chr5 26013301 26013613 -173616537 + AluSx SINE Alu 1 312 0 2353 90 0 0 chr5 26015266 26015565 -173614585 - AluSc SINE Alu -10 299 1 227 374 24 0 chr5 26015680 26015763 -173614387 - L2 LINE L2 0 3272 3188 21 0 0 0 chr5 26017186 26017207 -173612943 + AT_rich Low_complexity Low_complexity 1 21 0 213 298 107 0 chr5 26018028 26018112 -173612038 + L2 LINE L2 3161 3253 -19 187 314 0 0 chr5 26018216 26018267 -173611883 - MIR SINE MIR -155 107 57 583 186 70 16 chr5 26018279 26018408 -173611742 + AluJo SINE Alu 1 136 -176 1192 252 153 46 chr5 26018594 26019117 -173611033 + MLT1E LTR MaLR 15 593 0 434 339 81 37 chr5 26022045 26022507 -173607643 + L2 LINE L2 2793 3282 -31 770 202 8 97 chr5 26024075 26024313 -173605837 - MER20 DNA MER1_type 0 219 3 219 295 13 26 chr5 26024867 26024945 -173605205 - MIR3 SINE MIR -3 205 129 22 35 0 0 chr5 26025908 26025937 -173604213 + AT_rich Low_complexity Low_complexity 1 29 0 1671 173 9 43 chr5 26025995 26026173 -173603977 + MLT1A1-int LTR MaLR 1424 1588 -147 2510 54 0 0 chr5 26026173 26026470 -173603680 - AluY SINE Alu -14 297 1 1671 173 9 43 chr5 26026470 26026614 -173603536 + MLT1A1-int LTR MaLR 1588 1735 0 1223 241 71 3 chr5 26026636 26026972 -173603178 + MLT1A1 LTR MaLR 5 363 -2 453 304 57 30 chr5 26028413 26028676 -173601474 - L2 LINE L2 -67 3246 2977 324 307 21 7 chr5 26028689 26028829 -173601321 + (TA)n Simple_repeat Simple_repeat 2 143 0 557 314 159 19 chr5 26028830 26029145 -173601005 - L2 LINE L2 -349 2965 2607 241 254 56 14 chr5 26029863 26029934 -173600216 - MIR3 SINE MIR -39 169 96 298 328 44 33 chr5 26031143 26031326 -173598824 + L2 LINE L2 3085 3269 -44 305 257 0 83 chr5 26032526 26032635 -173597515 + L1MC4 LINE L1 6614 6713 -1329 24 0 0 0 chr5 26033580 26033604 -173596546 + AT_rich Low_complexity Low_complexity 1 24 0 943 166 13 0 chr5 26033605 26033756 -173596394 + AluSg/x SINE Alu 135 287 -25 240 137 0 0 chr5 26033758 26033809 -173596341 + L1MC4 LINE L1 6653 6703 -1339 307 306 24 0 chr5 26033814 26033899 -173596251 + L1MC4 LINE L1 6617 6703 -1339 305 315 36 0 chr5 26033819 26033930 -173596220 - L1MC4 LINE L1 -1339 6703 6589 * 739 321 25 4 chr5 26034478 26034721 -173595429 + MIR SINE MIR 11 258 -4 336 24 0 0 chr5 26035823 26035864 -173594286 + (CA)n Simple_repeat Simple_repeat 2 42 0 240 257 50 40 chr5 26036177 26036278 -173593872 + MARNA DNA Mariner 137 238 -348 242 325 12 24 chr5 26036294 26036377 -173593773 - MER5A DNA MER1_type -30 159 78 2028 137 55 25 chr5 26036505 26036869 -173593281 + THE1C LTR MaLR 1 375 0 1699 174 7 16 chr5 26037243 26037547 -173592603 + AluSx SINE Alu 1 301 -11 25 0 0 0 chr5 26037655 26037680 -173592470 + AT_rich Low_complexity Low_complexity 1 25 0 401 333 44 48 chr5 26037823 26038075 -173592075 - MIR SINE MIR -10 252 2 21 0 0 0 chr5 26038768 26038789 -173591361 + AT_rich Low_complexity Low_complexity 1 21 0 279 122 0 0 chr5 26039864 26039913 -173590237 + (ATG)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr5 26041762 26041783 -173588367 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 26043022 26043045 -173587105 + AT_rich Low_complexity Low_complexity 1 23 0 715 250 91 14 chr5 26043166 26043374 -173586776 - MIR SINE MIR -20 242 19 607 87 0 0 chr5 26043633 26043725 -173586425 + L1PA15 LINE L1 6072 6163 -2 241 323 21 11 chr5 26044229 26044322 -173585828 + L2 LINE L2 3220 3313 0 22 35 0 0 chr5 26044510 26044539 -173585611 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 26045253 26045279 -173584871 + AT_rich Low_complexity Low_complexity 1 26 0 24 32 0 0 chr5 26046047 26046078 -173584072 + AT_rich Low_complexity Low_complexity 1 31 0 246 315 11 0 chr5 26047278 26047367 -173582783 + GA-rich Low_complexity Low_complexity 1 90 0 29 84 0 0 chr5 26052470 26052541 -173577609 + AT_rich Low_complexity Low_complexity 1 71 0 207 186 0 0 chr5 26052824 26052867 -173577283 + (CATATA)n Simple_repeat Simple_repeat 5 47 0 23 0 0 0 chr5 26053603 26053626 -173576524 + AT_rich Low_complexity Low_complexity 1 23 0 472 291 118 17 chr5 26054004 26054241 -173575909 - MLT1J LTR MaLR -239 272 12 21 0 0 0 chr5 26054444 26054465 -173575685 + AT_rich Low_complexity Low_complexity 1 21 0 1865 125 4 7 chr5 26055816 26056097 -173574053 - AluSg SINE Alu -30 280 1 637 174 28 69 chr5 26056536 26056713 -173573437 + LTR48 LTR ERV1 3 169 -591 * 1153 193 88 40 chr5 26056708 26056982 -173573168 + LTR3 LTR ERVK 5 291 -141 15097 127 29 8 chr5 26056982 26057092 -173573058 + HERVK3 LTR ERVK 473 579 -6664 2089 113 0 28 chr5 26057092 26057410 -173572740 + AluSc SINE Alu 1 309 0 15097 127 29 8 chr5 26057410 26059687 -173570463 + HERVK3 LTR ERVK 579 2910 -4333 1366 95 0 0 chr5 26059674 26059863 -173570287 + HERVK3 LTR ERVK 4119 4307 -2936 * 4312 127 11 1 chr5 26059862 26060530 -173569620 + HERVK3 LTR ERVK 4685 5358 -1885 * 7146 98 3 1 chr5 26060525 26061503 -173568647 + HERVK3 LTR ERVK 6264 7243 0 1069 234 94 12 chr5 26061507 26061763 -173568387 + LTR3 LTR ERVK 5 281 -151 6601 69 3 10 chr5 26061764 26062659 -173567491 - L1PA6 LINE L1 0 6154 5266 25 31 0 0 chr5 26063177 26063209 -173566941 + AT_rich Low_complexity Low_complexity 1 32 0 6090 148 17 12 chr5 26063327 26064486 -173565664 - L1MA2 LINE L1 0 6304 5141 2056 133 0 3 chr5 26064587 26064888 -173565262 - AluSg SINE Alu -10 300 1 21 0 0 0 chr5 26065224 26065245 -173564905 + AT_rich Low_complexity Low_complexity 1 21 0 247 294 8 8 chr5 26065251 26065377 -173564773 + (TA)n Simple_repeat Simple_repeat 2 127 0 1614 239 115 72 chr5 26065452 26066147 -173564003 - MER50 LTR ERV1 0 734 10 238 397 17 9 chr5 26066807 26066923 -173563227 - MIR3 SINE MIR -1 207 91 180 0 0 0 chr5 26067846 26067866 -173562284 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 594 171 0 43 chr5 26067936 26068053 -173562097 + AluJb SINE Alu 178 289 -23 310 243 19 65 chr5 26068879 26068986 -173561164 + L1ME3A LINE L1 5565 5666 -504 2042 170 66 24 chr5 26068997 26069408 -173560742 + LTR3 LTR ERVK 5 432 0 266 186 0 0 chr5 26069408 26069451 -173560699 + HERVK3 LTR ERVK 1 43 -7200 785 272 75 0 chr5 26069509 26069788 -173560362 + L1ME3A LINE L1 5859 6158 -12 26696 76 9 7 chr5 26070088 26073815 -173556335 - L1P LINE L1 -804 5342 1607 2138 108 7 3 chr5 26074150 26074446 -173555704 - AluSx SINE Alu -15 297 1 537 314 35 9 chr5 26074697 26074926 -173555224 + L1ME1 LINE L1 5928 6162 -4 24 53 0 0 chr5 26075929 26075967 -173554183 + AT_rich Low_complexity Low_complexity 1 38 0 1933 176 77 15 chr5 26076512 26076710 -173553440 + MSTA LTR MaLR 1 185 -243 258 32 0 0 chr5 26076710 26076741 -173553409 + (TC)n Simple_repeat Simple_repeat 2 32 0 1933 176 77 15 chr5 26076741 26076945 -173553205 + MSTA LTR MaLR 185 428 0 4052 208 62 20 chr5 26076979 26078491 -173551659 - L1MB2 LINE L1 0 6171 4589 21 71 0 0 chr5 26079348 26079390 -173550760 + AT_rich Low_complexity Low_complexity 1 42 0 1247 63 6 0 chr5 26079393 26079588 -173550562 - AluY SINE Alu 0 329 134 21 0 0 0 chr5 26080649 26080670 -173549480 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 26082336 26082364 -173547786 + AT_rich Low_complexity Low_complexity 1 28 0 9217 142 18 37 chr5 26083013 26084640 -173545510 - L1P LINE L1 -4539 1607 11 715 200 0 35 chr5 26084646 26084816 -173545334 + LTR3 LTR ERVK 267 430 -2 257 154 0 0 chr5 26084822 26084861 -173545289 + HERVK3 LTR ERVK 1 39 -7204 2546 171 96 22 chr5 26084861 26085416 -173544734 + LTR48 LTR ERV1 192 787 0 23 0 0 0 chr5 26085929 26085952 -173544198 + AT_rich Low_complexity Low_complexity 1 23 0 742 277 128 34 chr5 26086050 26086371 -173543779 - LTR40a LTR ERVL 0 519 169 2556 87 29 3 chr5 26086769 26087147 -173543003 - L1PA13 LINE L1 -5 6158 5771 242 333 105 35 chr5 26088304 26088475 -173541675 + MER5A DNA MER1_type 7 189 0 233 228 0 18 chr5 26089090 26089147 -173541003 + GA-rich Low_complexity Low_complexity 3 58 0 618 281 23 0 chr5 26089205 26089376 -173540774 + MER45A DNA AcHobo 1 175 -3 405 335 21 21 chr5 26089657 26089848 -173540302 - L2 LINE L2 -4 3309 3119 25 51 0 0 chr5 26090607 26090646 -173539504 + AT_rich Low_complexity Low_complexity 1 39 0 722 181 0 8 chr5 26092604 26092731 -173537419 - FLAM_C SINE Alu -7 126 1 22 0 0 0 chr5 26092784 26092806 -173537344 + AT_rich Low_complexity Low_complexity 1 22 0 1226 321 106 12 chr5 26093029 26093235 -173536915 - L2 LINE L2 0 3313 3128 1224 198 54 124 chr5 26093235 26093345 -173536805 + MLT1D LTR MaLR 4 120 -385 2262 103 0 3 chr5 26093345 26093656 -173536494 + AluSg SINE Alu 1 310 0 1224 198 54 124 chr5 26093656 26093695 -173536455 + MLT1D LTR MaLR 120 160 -345 183 42 0 0 chr5 26093695 26093719 -173536431 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1224 198 54 124 chr5 26093719 26094108 -173536042 + MLT1D LTR MaLR 160 505 0 1226 321 106 12 chr5 26094108 26094732 -173535418 - L2 LINE L2 -185 3128 2403 30 27 0 0 chr5 26095471 26095508 -173534642 + AT_rich Low_complexity Low_complexity 1 37 0 37 39 0 0 chr5 26095603 26095654 -173534496 + AT_rich Low_complexity Low_complexity 1 51 0 26 30 0 0 chr5 26096086 26096119 -173534031 + AT_rich Low_complexity Low_complexity 1 33 0 2579 55 0 0 chr5 26096859 26097168 -173532982 + AluY SINE Alu 1 309 -2 221 149 43 0 chr5 26097487 26097534 -173532616 + CT-rich Low_complexity Low_complexity 3 51 0 206 0 69 0 chr5 26098322 26098351 -173531799 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1947 146 3 0 chr5 26098418 26098719 -173531431 - AluSx SINE Alu -10 302 1 362 264 11 0 chr5 26099701 26099788 -173530362 + MIR SINE MIR 78 165 -97 1678 188 10 0 chr5 26100028 26100321 -173529829 + AluSx SINE Alu 1 296 -16 22 56 0 0 chr5 26100624 26100660 -173529490 + AT_rich Low_complexity Low_complexity 1 36 0 2231 193 27 2 chr5 26101084 26101498 -173528652 + MSTB LTR MaLR 1 424 -2 222 204 0 0 chr5 26101621 26101670 -173528480 + (TG)n Simple_repeat Simple_repeat 2 50 0 747 244 6 0 chr5 26101909 26102073 -173528077 - MER2 DNA MER2_type -180 165 1 429 318 108 0 chr5 26102594 26102770 -173527380 + MIR SINE MIR 3 197 -65 34 24 0 0 chr5 26102903 26102944 -173527206 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr5 26102977 26102998 -173527152 + AT_rich Low_complexity Low_complexity 1 21 0 2044 120 19 3 chr5 26104265 26104573 -173525577 + AluSp SINE Alu 1 313 0 1509 182 64 33 chr5 26104593 26104923 -173525227 + MER46B DNA MER2_type 22 236 0 266 339 47 47 chr5 26105141 26105312 -173524838 - MIR SINE MIR -86 176 6 231 88 0 0 chr5 26105652 26105686 -173524464 + (TG)n Simple_repeat Simple_repeat 1 34 0 260 370 37 40 chr5 26106041 26106365 -173523785 + L1ME LINE L1 102 424 -5646 285 128 21 0 chr5 26106369 26106416 -173523734 + L1PB4 LINE L1 6049 6096 -60 307 192 26 0 chr5 26106520 26106598 -173523552 + L1PB4 LINE L1 6074 6153 -3 612 158 0 0 chr5 26106694 26106789 -173523361 + THE1C LTR MaLR 1 95 -280 686 119 0 0 chr5 26106794 26106895 -173523255 + THE1-int LTR MaLR 123 223 -1357 * 1203 149 5 0 chr5 26106894 26107088 -173523062 + THE1-int LTR MaLR 818 1012 -568 2610 164 36 7 chr5 26107088 26107534 -173522616 + MSTA-int LTR MaLR 1193 1651 0 274 108 31 31 chr5 26107534 26107599 -173522551 + (ATATG)n Simple_repeat Simple_repeat 3 67 0 585 234 0 0 chr5 26107599 26107710 -173522440 + MSTA LTR MaLR 1 111 -317 524 174 0 0 chr5 26107717 26107809 -173522341 + MSTA LTR MaLR 337 428 0 260 244 63 55 chr5 26107974 26108101 -173522049 + MLT1K LTR MaLR 99 226 -428 * 863 274 53 51 chr5 26108084 26108518 -173521632 + MLT2B1 LTR ERVL 86 520 0 561 254 56 106 chr5 26108520 26108894 -173521256 + MLT1E3 LTR MaLR 136 487 -139 2329 206 9 10 chr5 26108894 26109468 -173520682 + L1MA2 LINE L1 3534 4108 -3457 5168 189 14 13 chr5 26109474 26110519 -173519631 + L1MA2 LINE L1 4706 5751 -1814 6231 180 110 64 chr5 26110522 26112121 -173518029 - MER52A LTR ERV1 -2 1753 1 5536 219 9 8 chr5 26112122 26112357 -173517793 + L1MA2 LINE L1 5750 5983 -1740 1655 170 181 6 chr5 26112357 26112721 -173517429 - MSTA LTR MaLR 0 428 1 5536 219 9 8 chr5 26112721 26114454 -173515696 + L1MA2 LINE L1 5983 7722 -1 580 233 90 0 chr5 26114514 26114647 -173515503 + FRAM SINE Alu 1 145 -31 366 259 145 23 chr5 26114748 26114879 -173515271 + MIR3 SINE MIR 17 163 -45 31 68 0 0 chr5 26114881 26114940 -173515210 + AT_rich Low_complexity Low_complexity 1 59 0 301 270 14 0 chr5 26115897 26115971 -173514179 + MER58 DNA MER1_type 128 2407 -13 848 206 6 0 chr5 26116171 26116351 -173513799 - L1 LINE L1 -799 5347 5167 410 390 10 5 chr5 26116475 26116680 -173513470 - L2 LINE L2 -210 3062 2857 286 359 28 37 chr5 26116809 26117026 -173513124 + MLT1K LTR MaLR 194 408 -180 348 176 0 0 chr5 26117040 26117108 -173513042 + GA-rich Low_complexity Low_complexity 3 70 0 424 354 0 0 chr5 26117483 26117610 -173512540 - L2 LINE L2 0 3313 3187 12086 165 81 15 chr5 26117625 26118624 -173511526 + Tigger1 DNA MER2_type 2 934 -1484 2382 132 65 7 chr5 26118624 26119027 -173511123 - MSTA LTR MaLR 0 428 3 12086 165 81 15 chr5 26119027 26120294 -173509856 + Tigger1 DNA MER2_type 934 2418 0 5302 167 24 19 chr5 26120916 26122023 -173508127 - L1 LINE L1 -1109 6456 5344 * 11706 164 99 5 chr5 26122016 26123867 -173506283 - L1 LINE L1 -3854 3711 1595 183 42 0 0 chr5 26123867 26123891 -173506259 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 11706 164 99 5 chr5 26123891 26124365 -173505785 - L1 LINE L1 -5970 1595 1167 5035 44 24 2 chr5 26124787 26125418 -173504732 - L1PA4 LINE L1 0 6155 5511 2002 135 7 0 chr5 26127875 26128157 -173501993 - AluSc SINE Alu -25 284 1 1440 181 4 8 chr5 26128344 26128610 -173501540 - MER47A DNA MER2_type 0 366 102 1704 135 52 1 chr5 26128610 26128986 -173501164 + L1MA5 LINE L1 5189 5581 -719 1699 127 0 4 chr5 26128987 26129224 -173500926 + AluSx SINE Alu 1 236 -76 1444 159 12 52 chr5 26129224 26129362 -173500788 + L1MA5 LINE L1 5985 6127 -173 1900 163 0 0 chr5 26129362 26129657 -173500493 + AluSx SINE Alu 1 295 -17 1444 159 12 52 chr5 26129657 26129845 -173500305 + L1MA5 LINE L1 6127 6298 -2 234 118 0 118 chr5 26129851 26129902 -173500248 - MER47A DNA MER2_type -241 125 81 24 53 0 0 chr5 26130044 26130082 -173500068 + AT_rich Low_complexity Low_complexity 1 38 0 186 133 0 0 chr5 26130714 26130744 -173499406 + (TATATG)n Simple_repeat Simple_repeat 4 33 0 23 68 0 0 chr5 26132185 26132229 -173497921 + AT_rich Low_complexity Low_complexity 1 44 0 957 231 69 26 chr5 26132559 26132905 -173497245 + MLT1A1 LTR MaLR 1 361 -4 1398 198 88 18 chr5 26133052 26133395 -173496755 - MLT1A2 LTR MaLR -7 367 1 1874 133 22 4 chr5 26133509 26133839 -173496311 + AluSq SINE Alu 1 335 0 23 0 0 0 chr5 26134163 26134186 -173495964 + AT_rich Low_complexity Low_complexity 1 23 0 186 133 0 0 chr5 26134723 26134753 -173495397 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 24 32 0 0 chr5 26135699 26135730 -173494420 + AT_rich Low_complexity Low_complexity 1 31 0 21 71 0 0 chr5 26136997 26137039 -173493111 + AT_rich Low_complexity Low_complexity 1 42 0 330 343 29 41 chr5 26137134 26137376 -173492774 - HAL1b LINE L1 -664 684 446 2296 88 0 32 chr5 26137473 26137781 -173492369 - AluSg1 SINE Alu -8 301 4 23 0 0 0 chr5 26137787 26137810 -173492340 + AT_rich Low_complexity Low_complexity 1 23 0 222 222 22 0 chr5 26137912 26137957 -173492193 - L2 LINE L2 -12 3260 3215 25 0 0 0 chr5 26138809 26138834 -173491316 + AT_rich Low_complexity Low_complexity 1 25 0 2114 105 25 0 chr5 26138860 26139146 -173491004 - AluSx SINE Alu -11 301 9 23 78 0 0 chr5 26139484 26139535 -173490615 + AT_rich Low_complexity Low_complexity 1 51 0 1722 132 6 89 chr5 26139630 26139955 -173490195 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 26140295 26140316 -173489834 + AT_rich Low_complexity Low_complexity 1 21 0 1632 164 0 10 chr5 26140564 26140874 -173489276 - L1MA7 LINE L1 0 6291 5985 837 303 67 24 chr5 26141291 26141805 -173488345 - L1ME LINE L1 -2452 3930 3440 180 0 0 0 chr5 26141805 26141825 -173488325 + (CATTT)n Simple_repeat Simple_repeat 1 20 0 1784 166 3 27 chr5 26141826 26142127 -173488023 - AluJb SINE Alu -18 294 1 837 303 67 24 chr5 26142127 26142191 -173487959 - L1ME LINE L1 -2941 3441 3325 328 238 173 42 chr5 26142200 26142368 -173487782 - L1ME LINE L1 -4660 1724 1535 476 286 63 22 chr5 26142684 26143051 -173487099 - L1ME LINE L1 -4985 1387 1006 5206 54 15 4 chr5 26143070 26143875 -173486275 - L1PA7 LINE L1 -228 5926 5119 1547 80 9 0 chr5 26143876 26144088 -173486062 + L1PA7 LINE L1 5940 6153 -1 358 388 135 16 chr5 26144579 26144891 -173485259 - L1ME LINE L1 -6026 537 189 737 199 0 0 chr5 26145101 26145232 -173484918 + FLAM_C SINE Alu 1 131 -12 836 201 179 45 chr5 26146756 26147065 -173483085 - MER83C LTR ERV1 -46 327 1 187 156 16 125 chr5 26147104 26147168 -173482982 - L2 LINE L2 -854 2460 2404 1152 340 176 12 chr5 26147170 26147986 -173482164 - L2 LINE L2 -1834 1480 531 405 307 159 0 chr5 26148136 26148325 -173481825 + L3 LINE CR1 1306 1524 -53 182 268 0 0 chr5 26148464 26148505 -173481645 - L2 LINE L2 -39 3233 3193 2326 60 0 23 chr5 26148729 26149029 -173481121 + AluY SINE Alu 1 293 -18 199 226 38 19 chr5 26149419 26149472 -173480678 + L2 LINE L2 2921 2974 -340 217 250 0 0 chr5 26149728 26149780 -173480370 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 184 337 97 72 chr5 26149899 26150824 -173479326 - L2 LINE L2 -638 2676 1729 230 236 106 24 chr5 26151439 26151562 -173478588 + L1ME LINE L1 5741 5873 -248 2294 93 14 14 chr5 26153491 26153846 -173476304 - L1P LINE L1 -1559 4587 4233 3939 98 43 5 chr5 26153846 26154429 -173475721 - LTR14B LTR ERVK 0 608 4 774 37 56 28 chr5 26154433 26154541 -173475609 - HERVK14 LTR ERVK 0 5945 5835 318 222 0 18 chr5 26154541 26154616 -173475534 - MER41C LTR ERV1 -493 61 1 3406 68 23 1 chr5 26154616 26155279 -173474871 - HERVK3 LTR ERVK -186 5759 5013 949 83 0 0 chr5 26155278 26155399 -173474751 - HERVK3 LTR ERVK -1545 4400 4280 * 250 62 0 0 chr5 26155551 26155583 -173474567 - HERVK3 LTR ERVK -7025 218 187 180 246 0 0 chr5 26155591 26155660 -173474490 + CT-rich Low_complexity Low_complexity 2 70 0 2973 127 51 2 chr5 26156385 26156834 -173473316 - HERVK3 LTR ERVK -3769 2176 1706 5555 66 3 0 chr5 26156869 26157566 -173472584 - HERVK3 LTR ERVK -5246 699 1 4171 91 39 5 chr5 26157566 26158151 -173471999 - LTR14B LTR ERVK 0 608 4 19231 111 10 4 chr5 26158155 26161056 -173469094 - L1P LINE L1 -1908 4238 1320 6274 80 20 6 chr5 26161056 26162570 -173467580 + L1PA7 LINE L1 4624 6149 -5 22 0 0 0 chr5 26162570 26162592 -173467558 + AT_rich Low_complexity Low_complexity 1 22 0 3419 189 36 55 chr5 26162592 26164200 -173465950 - L1PB4 LINE L1 -20 6838 5263 2882 92 0 0 chr5 26164200 26164580 -173465570 + MLT2A1 LTR ERVL 1 380 -64 387 59 294 15 chr5 26164626 26164653 -173465497 + MLT2A1 LTR ERVL 358 376 -68 733 11 21 0 chr5 26164653 26164747 -173465403 + (TA)n Simple_repeat Simple_repeat 2 97 0 387 59 294 15 chr5 26164747 26164787 -173465363 + MLT2A1 LTR ERVL 376 444 0 240 98 39 39 chr5 26164822 26164873 -173465277 - FAM SINE Alu -6 173 123 7633 238 61 17 chr5 26164875 26167668 -173462482 - L1PB4 LINE L1 -1613 5235 2214 2202 103 10 0 chr5 26167668 26167969 -173462181 - AluY SINE Alu -7 304 1 7633 238 61 17 chr5 26167969 26169154 -173460996 - L1PB4 LINE L1 -4634 2214 1082 356 387 84 31 chr5 26169588 26169779 -173460371 - L1PB4 LINE L1 -6062 787 587 333 394 89 25 chr5 26170084 26170287 -173459863 - L1PB4 LINE L1 -6062 787 572 485 286 179 30 chr5 26170302 26170564 -173459586 - L1PB4 LINE L1 -6399 450 150 197 381 9 0 chr5 26170600 26170705 -173459445 - L2 LINE L2 -1097 2217 2112 542 347 28 14 chr5 26170971 26171187 -173458963 - MIR SINE MIR 0 262 44 1601 200 45 79 chr5 26171272 26171741 -173458409 + MLT1C LTR MaLR 5 457 -10 1025 217 175 29 chr5 26172066 26172380 -173457770 + MLT1A2 LTR MaLR 4 363 -11 310 307 37 16 chr5 26173014 26173164 -173456986 - MIR SINE MIR -65 143 36 25 0 0 0 chr5 26173498 26173523 -173456627 + AT_rich Low_complexity Low_complexity 1 25 0 27 62 0 0 chr5 26174138 26174186 -173455964 + AT_rich Low_complexity Low_complexity 1 48 0 2041 243 20 45 chr5 26174497 26175095 -173455055 - MER92B LTR ERV1 0 636 54 23 78 0 0 chr5 26175095 26175146 -173455004 + AT_rich Low_complexity Low_complexity 1 51 0 1378 148 63 11 chr5 26175146 26175430 -173454720 - L1MA8 LINE L1 -20 6271 5973 317 115 0 0 chr5 26176083 26176140 -173454010 - MLT2C1 LTR ERVL 0 414 349 1568 156 31 89 chr5 26176140 26176498 -173453652 + MER2 DNA MER2_type 1 337 -8 * 1667 247 7 51 chr5 26176487 26176937 -173453213 - MLT2B1 LTR ERVL -90 430 1 215 261 14 43 chr5 26176937 26177006 -173453144 - L2 LINE L2 -704 2610 2544 374 290 55 59 chr5 26177116 26177371 -173452779 - L2 LINE L2 -1240 2074 1821 28 0 0 0 chr5 26178430 26178458 -173451692 + AT_rich Low_complexity Low_complexity 1 28 0 410 354 115 10 chr5 26178749 26179063 -173451087 - L3 LINE CR1 -1 1576 1230 262 331 40 33 chr5 26179194 26179345 -173450805 - L3 LINE CR1 -816 761 610 418 336 72 68 chr5 26179395 26179676 -173450474 + L1MEd LINE L1 37 315 -5804 2096 92 3 0 chr5 26179676 26180019 -173450131 + AluSp SINE Alu 1 344 0 418 336 72 68 chr5 26180019 26180473 -173449677 + L1MEd LINE L1 315 776 -5343 414 291 32 67 chr5 26180519 26180832 -173449318 + L1MEd LINE L1 865 1166 -4953 283 277 51 18 chr5 26180871 26181041 -173449109 + L1MEd LINE L1 1354 1628 -862 345 364 84 34 chr5 26181887 26182184 -173447966 - L3 LINE CR1 -1096 481 170 3391 34 2 0 chr5 26182203 26182613 -173447537 - L1PA4 LINE L1 0 6155 5745 21 36 0 0 chr5 26182656 26182684 -173447466 + AT_rich Low_complexity Low_complexity 1 28 0 223 333 105 0 chr5 26183336 26183450 -173446700 + MIR SINE MIR 74 199 -63 408 229 28 69 chr5 26183547 26183691 -173446459 - MIR SINE MIR -3 259 122 210 143 0 0 chr5 26184149 26184184 -173445966 + (TG)n Simple_repeat Simple_repeat 2 36 0 225 247 41 52 chr5 26184260 26184357 -173445793 + MLT1I LTR MaLR 120 215 -194 262 227 13 0 chr5 26184542 26184617 -173445533 + MER116 DNA Mariner 5 80 0 1849 230 75 19 chr5 26187195 26187673 -173442477 - MLT1D LTR MaLR 0 505 1 25 31 0 0 chr5 26187908 26187940 -173442210 + AT_rich Low_complexity Low_complexity 1 32 0 292 268 89 16 chr5 26188798 26188921 -173441229 + LTR67 LTR ERVL 424 555 -2 22 0 0 0 chr5 26189020 26189042 -173441108 + AT_rich Low_complexity Low_complexity 1 22 0 182 323 199 0 chr5 26189421 26189582 -173440568 - L2 LINE L2 -1060 2254 2062 189 325 44 62 chr5 26190195 26190355 -173439795 - L2 LINE L2 -152 3161 3005 301 70 35 0 chr5 26190719 26190776 -173439374 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 206 153 42 42 chr5 26190944 26191016 -173439134 + (TATAA)n Simple_repeat Simple_repeat 3 74 0 24 0 0 0 chr5 26193518 26193542 -173436608 + AT_rich Low_complexity Low_complexity 1 24 0 315 269 21 0 chr5 26193831 26193924 -173436226 - MER5A DNA MER1_type -79 110 16 2160 44 11 4 chr5 26193950 26194223 -173435927 + L1PA3 LINE L1 5870 6144 -11 255 31 0 0 chr5 26194240 26194272 -173435878 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 213 39 0 0 chr5 26194325 26194351 -173435799 + (TTTTTG)n Simple_repeat Simple_repeat 1 26 0 1073 292 109 81 chr5 26194391 26195251 -173434899 + L2 LINE L2 2429 3308 -5 32 57 0 0 chr5 26195396 26195449 -173434701 + AT_rich Low_complexity Low_complexity 1 53 0 21 36 0 0 chr5 26195626 26195654 -173434496 + AT_rich Low_complexity Low_complexity 1 28 0 299 316 26 9 chr5 26196204 26196318 -173433832 - MER94 DNA DNA -1 133 18 246 340 50 46 chr5 26196497 26196738 -173433412 - L3 LINE CR1 -200 1377 1136 223 186 0 0 chr5 26197068 26197111 -173433039 + T-rich Low_complexity Low_complexity 1 43 0 445 341 109 57 chr5 26197243 26197990 -173432160 + L2 LINE L2 2517 3304 -9 1784 156 10 3 chr5 26198845 26199184 -173430966 - AluSx SINE Alu 0 312 1 482 101 0 13 chr5 26199296 26199375 -173430775 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1818 160 3 3 chr5 26199611 26199905 -173430245 - AluSx SINE Alu -18 294 1 247 333 79 0 chr5 26200187 26200301 -173429849 + MIR SINE MIR 139 261 -1 21 0 0 0 chr5 26200364 26200385 -173429765 + AT_rich Low_complexity Low_complexity 1 21 0 739 258 67 48 chr5 26200606 26200874 -173429276 - L1ME2 LINE L1 0 6098 5826 3425 268 85 50 chr5 26200884 26203714 -173426436 - L1ME2 LINE L1 -1076 5004 2075 22 35 0 0 chr5 26203714 26203743 -173426407 + AT_rich Low_complexity Low_complexity 1 29 0 628 271 60 21 chr5 26204013 26204206 -173425944 - L1ME2 LINE L1 -4475 1605 1396 450 49 0 0 chr5 26204206 26204267 -173425883 + (TG)n Simple_repeat Simple_repeat 2 62 0 628 271 60 21 chr5 26204267 26204357 -173425793 - L1ME2 LINE L1 -4684 1396 1311 271 162 0 29 chr5 26204458 26204526 -173425624 + CT-rich Low_complexity Low_complexity 5 70 0 1442 252 26 44 chr5 26204671 26205099 -173425051 - MLT1D LTR MaLR -64 441 22 430 272 68 19 chr5 26205116 26205381 -173424769 - L1ME2 LINE L1 -5167 903 626 1547 209 23 13 chr5 26205396 26205703 -173424447 + MLT2B3 LTR ERVL 13 322 -232 934 209 52 0 chr5 26205711 26205902 -173424248 + ERVL-B3 LTR ERVL 3644 3844 -1920 3114 181 34 26 chr5 26206010 26206636 -173423514 + ERVL-B3 LTR ERVL 4830 5460 -304 1881 156 24 0 chr5 26206635 26206968 -173423182 + ERVL-B3 LTR ERVL 5417 5757 -7 * 2416 204 43 43 chr5 26206968 26207522 -173422628 + MLT2B3 LTR ERVL 1 554 0 334 259 29 72 chr5 26207525 26207664 -173422486 - L1ME2 LINE L1 -5445 625 493 502 308 99 58 chr5 26207738 26208154 -173421996 - L1ME2 LINE L1 -5611 459 27 348 354 59 29 chr5 26208655 26208958 -173421192 - L2 LINE L2 -214 3058 2747 432 314 91 29 chr5 26210231 26210473 -173419677 - MLT1J2 LTR MaLR -2 448 192 2053 125 0 6 chr5 26212198 26212509 -173417641 - AluSc SINE Alu 0 309 1 601 284 16 36 chr5 26212624 26212818 -173417332 + MIR SINE MIR 47 236 -26 21 57 0 0 chr5 26213470 26213505 -173416645 + AT_rich Low_complexity Low_complexity 1 35 0 340 296 126 36 chr5 26213684 26214296 -173415854 + HAL1 LINE L1 796 1462 -1045 2328 70 0 3 chr5 26214392 26214690 -173415460 - AluY SINE Alu -14 297 1 422 238 122 34 chr5 26215484 26215631 -173414519 - MLT1H1 LTR MaLR 0 555 396 2398 67 0 0 chr5 26215717 26216014 -173414136 + AluY SINE Alu 8 304 -7 189 233 27 110 chr5 26216019 26216092 -173414058 - L3b LINE CR1 -235 1348 1282 880 300 65 56 chr5 26216662 26217522 -173412628 + HAL1 LINE L1 1502 2369 -138 271 0 51 0 chr5 26218047 26218086 -173412064 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 490 204 18 9 chr5 26218086 26218199 -173411951 - L1MA9 LINE L1 -37 6275 6162 1044 242 85 24 chr5 26218233 26218526 -173411624 + MER58B DNA MER1_type 5 315 -26 324 0 0 0 chr5 26218527 26218563 -173411587 + (CA)n Simple_repeat Simple_repeat 1 36 0 273 57 0 0 chr5 26219770 26219805 -173410345 + (CA)n Simple_repeat Simple_repeat 2 36 0 270 152 0 0 chr5 26219813 26219859 -173410291 - L2 LINE L2 -1 3312 3267 1818 149 86 6 chr5 26220210 26220546 -173409604 + MER47A DNA MER2_type 2 364 -2 3792 165 27 14 chr5 26221043 26221781 -173408369 - L1PA16 LINE L1 0 6166 5419 2348 252 29 38 chr5 26221791 26222691 -173407459 + L1P LINE L1 2267 3158 -2988 602 229 0 16 chr5 26222815 26222937 -173407213 + MLT2C1 LTR ERVL 208 327 -70 7071 206 93 67 chr5 26222942 26225349 -173404801 + Tigger2 DNA MER2_type 1 2468 -250 2288 86 0 0 chr5 26225349 26225639 -173404511 + AluY SINE Alu 1 290 -21 1304 200 13 172 chr5 26225813 26225894 -173404256 + MER67C LTR ERV1 1 93 -551 582 153 95 0 chr5 26225894 26226031 -173404119 - L1MA9 LINE L1 0 6312 6163 1304 200 13 172 chr5 26226031 26226140 -173404010 + MER67C LTR ERV1 93 218 -426 2231 110 3 0 chr5 26226140 26226448 -173403702 - AluSx SINE Alu -3 309 1 1304 200 13 172 chr5 26226448 26226701 -173403449 + MER67C LTR ERV1 218 403 -241 281 138 52 17 chr5 26226728 26226786 -173403364 + MER67D LTR ERV1 455 514 0 499 313 82 5 chr5 26226787 26226995 -173403155 - MLT2F LTR ERVL -152 511 288 1238 156 9 17 chr5 26227051 26227282 -173402868 + MER4D LTR ERV1 1 229 -674 1435 176 0 4 chr5 26227426 26227682 -173402468 + L1PA15 LINE L1 5910 6164 -1 10400 220 29 16 chr5 26227688 26229494 -173400656 + ERVL-C1 LTR ERVL 102 1883 -3881 1897 157 93 42 chr5 26229494 26229713 -173400437 - MSTA LTR MaLR 0 428 222 2190 130 0 0 chr5 26229713 26230021 -173400129 - AluSx SINE Alu -4 308 1 1897 157 93 42 chr5 26230021 26230208 -173399942 - MSTA LTR MaLR -206 222 1 7478 176 33 42 chr5 26230208 26230379 -173399771 - MSTA-int LTR MaLR 0 1580 1409 180 0 0 0 chr5 26230379 26230399 -173399751 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 7478 176 33 42 chr5 26230399 26231320 -173398830 - MSTA-int LTR MaLR -171 1409 504 1663 131 29 0 chr5 26231320 26231565 -173398585 - AluSx SINE Alu 0 312 61 7478 176 33 42 chr5 26231565 26232065 -173398085 - MSTA-int LTR MaLR -1076 504 1 1572 165 132 26 chr5 26232065 26232452 -173397698 - MSTA LTR MaLR 0 428 1 10400 220 29 16 chr5 26232452 26234383 -173395767 + ERVL-C1 LTR ERVL 1882 3975 -1789 3028 174 64 33 chr5 26234380 26234878 -173395272 + ERVL-C1 LTR ERVL 4145 4667 -1097 * 1972 145 129 8 chr5 26234878 26235258 -173394892 + MSTA LTR MaLR 1 426 -2 3028 174 64 33 chr5 26235258 26235370 -173394780 + ERVL-C1 LTR ERVL 4667 4774 -990 802 293 12 12 chr5 26235374 26235616 -173394534 - MLT1A1 LTR MaLR -11 354 113 1409 159 30 81 chr5 26236772 26237106 -173393044 + MER44D DNA MER2_type 23 609 0 2033 193 94 33 chr5 26237364 26237968 -173392182 - L1M LINE L1 -839 5307 4678 10268 209 50 11 chr5 26237969 26239083 -173391067 - L1PA15-16 LINE L1 -2294 4555 3486 2228 103 7 0 chr5 26239083 26239393 -173390757 - AluSp SINE Alu -1 312 1 10268 209 50 11 chr5 26239393 26241226 -173388924 - L1PA15-16 LINE L1 -3363 3486 3 228 216 0 0 chr5 26241270 26241321 -173388829 + (TATG)n Simple_repeat Simple_repeat 2 52 0 277 287 27 76 chr5 26241840 26242063 -173388087 - HAL1b LINE L1 -820 528 317 6679 76 23 0 chr5 26243019 26244072 -173386078 - L1PA7 LINE L1 0 6154 5093 11392 109 13 0 chr5 26244072 26245748 -173384402 + L1PA7 LINE L1 3393 5090 -1056 316 211 64 11 chr5 26245912 26246019 -173384131 - L1MA7 LINE L1 -109 6203 5982 434 110 0 66 chr5 26246028 26246119 -173384031 + L1MA7 LINE L1 6207 6291 0 182 45 91 0 chr5 26246676 26246720 -173383430 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1327 35 0 41 chr5 26246722 26246893 -173383257 - L1PA3 LINE L1 -3 6152 5989 1558 269 20 18 chr5 26247473 26247975 -173382175 + MLT1D LTR MaLR 3 505 0 1370 128 214 12 chr5 26248652 26248909 -173381241 - AluSg1 SINE Alu 0 309 1 1563 229 6 3 chr5 26248988 26249311 -173380839 - MER89-int LTR ERV1 -1034 5767 5444 718 187 15 0 chr5 26249595 26249729 -173380421 - AluSx SINE Alu 0 312 177 525 268 0 0 chr5 26249729 26249852 -173380298 - AluSx SINE Alu -190 123 1 1563 211 14 16 chr5 26251136 26251556 -173378594 + MLT2B1 LTR ERVL 1 467 -48 633 11 23 11 chr5 26251587 26251674 -173378476 + (TCTA)n Simple_repeat Simple_repeat 2 89 0 330 131 0 33 chr5 26251678 26251739 -173378411 + MLT2B1 LTR ERVL 462 520 0 1657 165 67 20 chr5 26251990 26252395 -173377755 - Charlie1a DNA MER1_type -6 1449 1026 1700 196 24 6 chr5 26252660 26252997 -173377153 - MER61A LTR ERV1 0 343 1 3500 233 28 37 chr5 26253158 26254211 -173375939 - Charlie1a DNA MER1_type -412 1043 1 243 146 0 0 chr5 26254357 26254398 -173375752 + (TAG)n Simple_repeat Simple_repeat 1 41 0 239 324 12 81 chr5 26254518 26254691 -173375459 + LTR67 LTR ERVL 39 199 -358 1950 177 65 76 chr5 26255170 26255696 -173374454 - MLT2B1 LTR ERVL 0 520 1 2489 199 20 18 chr5 26259753 26260246 -173369904 + MER82 DNA MER2_type 1 494 -159 889 213 48 30 chr5 26260350 26260495 -173369655 - MER67C LTR ERV1 -413 297 145 1994 142 3 0 chr5 26260495 26260804 -173369346 + AluSx SINE Alu 1 310 -2 889 213 48 30 chr5 26260804 26260888 -173369262 - MER67C LTR ERV1 -565 145 64 659 131 95 0 chr5 26260912 26261049 -173369101 + L1MA9 LINE L1 6163 6312 0 444 193 0 23 chr5 26261049 26261130 -173369020 - MER67D LTR ERV1 -433 81 1 * 452 228 12 84 chr5 26261130 26261293 -173368857 + MLT2F LTR ERVL 509 659 -4 671 276 36 14 chr5 26262199 26262420 -173367730 - L1ME1 LINE L1 -5 6161 5936 240 229 16 0 chr5 26262447 26262508 -173367642 - L1ME1 LINE L1 -8 6158 6097 1629 211 30 19 chr5 26262634 26262995 -173367155 - MLT1A1 LTR MaLR 0 365 1 208 135 0 0 chr5 26263241 26263278 -173366872 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1581 220 20 37 chr5 26267431 26268001 -173362149 + MLT2B3 LTR ERVL 3 515 -39 594 93 0 0 chr5 26268001 26268087 -173362063 + (TCTA)n Simple_repeat Simple_repeat 2 87 0 1581 220 20 37 chr5 26268087 26268127 -173362023 + MLT2B3 LTR ERVL 515 554 0 383 309 73 55 chr5 26268599 26269036 -173361114 + L1M4 LINE L1 2134 2578 -3568 316 273 137 39 chr5 26269147 26269403 -173360747 + L1M4 LINE L1 2734 3014 -3132 21 57 0 0 chr5 26269657 26269692 -173360458 + AT_rich Low_complexity Low_complexity 1 35 0 673 315 103 7 chr5 26270016 26270441 -173359709 - L1ME2 LINE L1 -10 6154 5689 2229 281 97 43 chr5 26270461 26273072 -173357078 - L1ME1 LINE L1 -385 5779 3025 1198 273 99 44 chr5 26275044 26275498 -173354652 + MLT1F LTR MaLR 1 479 -63 2047 181 14 3 chr5 26275498 26275869 -173354281 + Tigger1 DNA MER2_type 1 375 -2043 710 210 41 82 chr5 26276552 26276697 -173353453 + MER6B DNA MER2_type 1 150 -715 237 65 0 0 chr5 26276697 26276728 -173353422 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1191 214 62 22 chr5 26276728 26277003 -173353147 - AluJb SINE Alu -16 286 1 710 210 41 82 chr5 26277003 26277075 -173353075 + MER6B DNA MER2_type 148 210 0 1155 240 42 0 chr5 26277177 26277485 -173352665 - L1MC3 LINE L1 -123 7662 7342 238 220 0 0 chr5 26279804 26279854 -173350296 + (TA)n Simple_repeat Simple_repeat 1 50 0 27 29 0 0 chr5 26280251 26280285 -173349865 + AT_rich Low_complexity Low_complexity 1 34 0 9800 80 7 0 chr5 26280844 26282973 -173347177 + L1PA7 LINE L1 4011 6151 -3 200 114 45 0 chr5 26283054 26283098 -173347052 + (TTAA)n Simple_repeat Simple_repeat 2 47 0 4001 204 34 18 chr5 26283149 26284284 -173345866 + L1PA16 LINE L1 4207 5377 -789 1859 165 38 22 chr5 26284284 26284653 -173345497 + THE1C LTR MaLR 1 375 0 4001 204 34 18 chr5 26284653 26285148 -173345002 + L1PA16 LINE L1 5377 5863 -303 266 317 42 42 chr5 26285257 26285377 -173344773 - L2 LINE L2 -979 2335 2216 193 107 0 0 chr5 26285402 26285430 -173344720 - L2 LINE L2 -1072 2242 2215 21 0 0 0 chr5 26286347 26286368 -173343782 + AT_rich Low_complexity Low_complexity 1 21 0 183 139 0 0 chr5 26286597 26286633 -173343517 + (GA)n Simple_repeat Simple_repeat 1 36 0 1306 205 0 60 chr5 26287697 26287995 -173342155 + AluJo SINE Alu 3 282 -30 23 33 0 0 chr5 26288821 26288851 -173341299 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr5 26288883 26288930 -173341220 + AT_rich Low_complexity Low_complexity 1 47 0 26 0 0 0 chr5 26289197 26289223 -173340927 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 26289345 26289367 -173340783 + AT_rich Low_complexity Low_complexity 1 22 0 764 250 71 5 chr5 26289573 26289675 -173340475 - MER58A DNA MER1_type -2211 209 115 405 0 0 0 chr5 26289675 26289720 -173340430 + (TC)n Simple_repeat Simple_repeat 2 46 0 357 24 0 0 chr5 26289719 26289761 -173340389 + (TA)n Simple_repeat Simple_repeat 1 42 0 * 764 250 71 5 chr5 26289720 26289854 -173340296 - MER58A DNA MER1_type -2305 115 1 191 111 0 28 chr5 26290848 26290884 -173339266 + (TTC)n Simple_repeat Simple_repeat 2 36 0 731 199 0 8 chr5 26291230 26291361 -173338789 + FLAM_C SINE Alu 1 130 -13 359 364 48 24 chr5 26292117 26292408 -173337742 - HAL1 LINE L1 -700 1807 1510 393 251 97 75 chr5 26292529 26293024 -173337126 - HAL1 LINE L1 -1192 1315 810 278 397 21 7 chr5 26293097 26293238 -173336912 - HAL1 LINE L1 -1832 675 533 311 371 52 62 chr5 26293313 26293736 -173336414 - HAL1 LINE L1 -2046 461 42 2474 130 3 8 chr5 26293736 26294113 -173336037 - THE1C LTR MaLR 0 375 1 311 371 52 62 chr5 26294113 26294155 -173335995 - HAL1 LINE L1 -2465 42 1 1153 234 19 19 chr5 26294410 26294671 -173335479 - MLT1A1 LTR MaLR 0 365 105 1561 211 61 125 chr5 26294687 26295124 -173335026 + MER77 LTR ERV1 24 411 -194 1419 246 28 14 chr5 26295124 26295481 -173334669 - MLT1A1 LTR MaLR 0 365 4 1561 211 61 125 chr5 26295481 26295665 -173334485 + MER77 LTR ERV1 411 605 0 248 256 0 13 chr5 26295686 26295711 -173334439 + (TA)n Simple_repeat Simple_repeat 1 25 -52 536 113 0 0 chr5 26295711 26295791 -173334359 - MADE1 DNA Mariner 0 80 1 248 256 0 13 chr5 26295791 26295843 -173334307 + (TA)n Simple_repeat Simple_repeat 25 77 0 652 130 0 0 chr5 26295930 26296030 -173334120 + HY3 scRNA scRNA 2 101 0 774 299 38 31 chr5 26296084 26296605 -173333545 - L1M4 LINE L1 -979 5561 5037 312 289 22 0 chr5 26296629 26296719 -173333431 - L1M4 LINE L1 -1665 4875 4784 2001 106 3 61 chr5 26296757 26297068 -173333082 - AluSx SINE Alu -19 293 1 942 145 32 59 chr5 26297077 26297298 -173332852 - L1MD1 LINE L1 0 6242 6028 1185 254 61 20 chr5 26297299 26297759 -173332391 - L1MDa LINE L1 -3288 3252 2774 186 189 0 0 chr5 26297844 26297881 -173332269 + (TA)n Simple_repeat Simple_repeat 2 38 0 525 224 125 2 chr5 26297887 26298162 -173331988 - L1MDa LINE L1 -3784 2756 2449 22 0 0 0 chr5 26298973 26298995 -173331155 + AT_rich Low_complexity Low_complexity 1 22 0 663 81 0 0 chr5 26299028 26299127 -173331023 + (GAA)n Simple_repeat Simple_repeat 2 100 0 23 0 0 0 chr5 26299543 26299566 -173330584 + AT_rich Low_complexity Low_complexity 1 23 0 648 304 22 0 chr5 26299906 26300090 -173330060 + MER5A DNA MER1_type 1 188 -1 430 318 47 6 chr5 26300723 26300893 -173329257 + MIR SINE MIR 20 196 -66 348 298 48 0 chr5 26301323 26301427 -173328723 - MIR SINE MIR -122 140 32 191 296 182 11 chr5 26302487 26302575 -173327575 + MIR3 SINE MIR 6 108 -100 878 255 81 26 chr5 26303322 26303467 -173326683 - MER21B LTR ERV1 -127 736 600 405 0 0 0 chr5 26303467 26303512 -173326638 + (CA)n Simple_repeat Simple_repeat 2 46 0 878 255 81 26 chr5 26303512 26303637 -173326513 - MER21B LTR ERV1 -263 600 451 21 36 0 0 chr5 26303672 26303700 -173326450 + AT_rich Low_complexity Low_complexity 1 28 0 181 320 90 16 chr5 26304991 26305113 -173325037 + L2 LINE L2 2210 2340 -974 745 299 55 13 chr5 26305390 26305587 -173324563 + L1MC4a LINE L1 5542 5729 -2079 3418 65 0 7 chr5 26305587 26306036 -173324114 - L1PA5 LINE L1 -13 6141 5696 745 299 55 13 chr5 26306036 26306219 -173323931 + L1MC4a LINE L1 5729 5938 -1870 360 0 0 0 chr5 26306249 26306289 -173323861 + (TG)n Simple_repeat Simple_repeat 2 41 0 1376 196 28 25 chr5 26306290 26306576 -173323574 + AluJo SINE Alu 17 303 -9 411 123 0 0 chr5 26306580 26306661 -173323489 + (GAA)n Simple_repeat Simple_repeat 2 82 0 26 0 0 0 chr5 26308034 26308060 -173322090 + AT_rich Low_complexity Low_complexity 1 26 0 2234 114 0 0 chr5 26308126 26308425 -173321725 - AluSx SINE Alu -9 303 5 22 35 0 0 chr5 26309715 26309744 -173320406 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 26309924 26309947 -173320203 + AT_rich Low_complexity Low_complexity 1 23 0 651 235 24 18 chr5 26309979 26310145 -173320005 + MLT1B LTR MaLR 2 168 -206 1005 56 0 0 chr5 26310145 26310271 -173319879 - L1PA8 LINE L1 -316 5856 5731 1035 72 7 26 chr5 26310271 26310422 -173319728 + L1PA8 LINE L1 6019 6168 -4 2384 43 0 3 chr5 26310429 26310764 -173319386 + AluY SINE Alu 1 334 0 818 256 20 10 chr5 26310839 26311038 -173319112 + MLT1B LTR MaLR 190 390 0 198 192 0 0 chr5 26311045 26311097 -173319053 + (TA)n Simple_repeat Simple_repeat 2 53 0 22 0 0 0 chr5 26311220 26311242 -173318908 + AT_rich Low_complexity Low_complexity 1 22 0 38 0 0 0 chr5 26311620 26311658 -173318492 + AT_rich Low_complexity Low_complexity 1 38 0 214 291 0 0 chr5 26312056 26312111 -173318039 + MIR SINE MIR 63 117 -145 24 85 0 0 chr5 26312174 26312233 -173317917 + AT_rich Low_complexity Low_complexity 1 59 0 1379 214 45 60 chr5 26312331 26312733 -173317417 + MSTD LTR MaLR 1 396 0 230 179 0 45 chr5 26313441 26313508 -173316642 - LTR66 LTR ERVL -149 461 398 463 283 66 15 chr5 26313542 26313740 -173316410 + LTR33 LTR ERVL 8 215 -306 274 302 123 0 chr5 26313776 26313882 -173316268 + LTR33 LTR ERVL 272 390 -131 605 219 4 122 chr5 26313882 26314119 -173316031 - MER63A DNA MER1_type 0 210 2 216 0 0 0 chr5 26314938 26314962 -173315188 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 449 366 25 15 chr5 26316069 26316311 -173313839 + ERVL LTR ERVL 1910 2209 -2835 3707 145 68 20 chr5 26316813 26317524 -173312626 - Tigger3(Golem) DNA MER2_type 0 3029 2285 2451 75 0 0 chr5 26317534 26317841 -173312309 + AluY SINE Alu 1 307 -4 552 210 0 0 chr5 26317846 26317946 -173312204 - Tigger3(Golem) DNA MER2_type -2929 100 1 39 22 0 0 chr5 26318489 26318535 -173311615 + AT_rich Low_complexity Low_complexity 1 46 0 380 324 27 0 chr5 26319393 26319541 -173310609 + MER104 DNA Tc2 1 152 -28 1266 151 55 0 chr5 26319983 26320201 -173309949 - MER30 DNA MER1_type 0 230 1 261 146 0 0 chr5 26321038 26321086 -173309064 + (TA)n Simple_repeat Simple_repeat 1 48 0 204 40 0 0 chr5 26321102 26321127 -173309023 + (GA)n Simple_repeat Simple_repeat 1 25 0 387 309 18 36 chr5 26321557 26321777 -173308373 + HAL1b LINE L1 231 446 -902 41 36 0 0 chr5 26322675 26322730 -173307420 + AT_rich Low_complexity Low_complexity 1 55 0 1307 229 26 23 chr5 26322730 26323032 -173307118 - AluJo SINE Alu -7 305 3 309 327 84 40 chr5 26323492 26323789 -173306361 - L2 LINE L2 -1 3312 3003 292 341 47 8 chr5 26323871 26324000 -173306150 - L2 LINE L2 -448 2866 2733 337 253 21 0 chr5 26324457 26324552 -173305598 + MER58 DNA MER1_type 2302 2398 -22 260 385 107 6 chr5 26324663 26324990 -173305160 - L2 LINE L2 -683 2631 2272 209 184 41 0 chr5 26325043 26325092 -173305058 + T-rich Low_complexity Low_complexity 1 51 0 2144 121 0 31 chr5 26325817 26326139 -173304011 + AluSx SINE Alu 1 312 0 1635 100 4 0 chr5 26326949 26327178 -173302972 + MER30 DNA MER1_type 1 230 0 21 0 0 0 chr5 26327515 26327536 -173302614 + AT_rich Low_complexity Low_complexity 1 21 0 398 288 9 9 chr5 26328587 26328698 -173301452 + HAL1b LINE L1 335 445 -903 385 280 136 23 chr5 26329010 26329407 -173300743 + HAL1b LINE L1 852 1293 -55 1600 158 18 0 chr5 26329942 26330226 -173299924 - AluSx SINE Alu 0 312 24 20352 53 5 2 chr5 26330326 26332963 -173297187 - L1P LINE L1 -1871 4275 1631 7353 39 1 1 chr5 26332964 26334540 -173295610 + L1PA5 LINE L1 4570 6146 -8 793 169 26 32 chr5 26334633 26334787 -173295363 - MSTA LTR MaLR -58 370 218 1742 281 40 12 chr5 26335128 26335780 -173294370 - L1MC4 LINE L1 -479 7563 6894 318 263 88 9 chr5 26335775 26335889 -173294261 + L1MC4 LINE L1 7547 7669 -373 * 762 264 104 22 chr5 26335931 26336333 -173293817 + L1MC4 LINE L1 7605 8039 -3 185 143 0 41 chr5 26336548 26336597 -173293553 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 291 100 29 0 chr5 26337275 26337344 -173292806 - L1PA6 LINE L1 -3 6151 6078 400 321 33 72 chr5 26338934 26339323 -173290827 + HAL1b LINE L1 62 435 -913 21 0 0 0 chr5 26339521 26339542 -173290608 + AT_rich Low_complexity Low_complexity 1 21 0 250 329 92 0 chr5 26339773 26339925 -173290225 - L1MC4 LINE L1 -2337 5471 5306 189 0 0 0 chr5 26340190 26340211 -173289939 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 535 174 107 40 chr5 26340382 26340531 -173289619 + MER76 LTR ERV 12 170 -518 25 0 0 0 chr5 26341045 26341070 -173289080 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr5 26341519 26341552 -173288598 + AT_rich Low_complexity Low_complexity 1 33 0 5200 169 19 28 chr5 26341552 26341831 -173288319 + L1MA4A LINE L1 5105 5385 -918 297 0 0 0 chr5 26341831 26341864 -173288286 + (TG)n Simple_repeat Simple_repeat 2 34 0 2107 128 3 0 chr5 26341872 26342169 -173287981 - AluSx SINE Alu -14 298 1 5200 169 19 28 chr5 26342169 26343084 -173287066 + L1MA4A LINE L1 5392 6298 -5 1902 148 0 7 chr5 26343269 26343572 -173286578 - AluSx SINE Alu -11 301 1 412 171 40 0 chr5 26343600 26343676 -173286474 + AluS SINE Alu 1 79 -223 820 271 21 25 chr5 26343836 26344076 -173286074 - MER8 DNA MER2_type 0 239 1 1857 159 52 0 chr5 26344121 26344430 -173285720 + MER7A DNA MER2_type 21 343 -3 934 197 44 19 chr5 26344441 26344695 -173285455 + L1MC4 LINE L1 6774 7021 -787 473 266 105 25 chr5 26344683 26345021 -173285129 + L1MC4 LINE L1 7330 7577 -231 * 990 265 82 16 chr5 26345021 26345387 -173284763 - MLT1B LTR MaLR 0 390 1 473 266 105 25 chr5 26345387 26345536 -173284614 + L1MC4 LINE L1 7577 7713 -95 195 100 0 0 chr5 26345586 26345616 -173284534 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 542 270 212 17 chr5 26345616 26345961 -173284189 + L1MC4 LINE L1 7488 7899 -143 38 81 0 0 chr5 26346018 26346105 -173284045 + AT_rich Low_complexity Low_complexity 1 87 0 332 358 56 39 chr5 26346247 26346479 -173283671 + L1ME LINE L1 5385 5620 -501 3199 161 17 9 chr5 26346739 26347361 -173282789 + MER4D LTR ERV1 266 872 0 432 0 0 0 chr5 26347835 26347883 -173282267 + (TA)n Simple_repeat Simple_repeat 2 49 0 2177 110 0 3 chr5 26347981 26348282 -173281868 - AluSg SINE Alu -10 300 1 1249 166 3 90 chr5 26348362 26348652 -173281498 + L1MA10 LINE L1 6027 6291 -43 550 352 82 40 chr5 26348958 26349555 -173280595 + MLT2F LTR ERVL 8 629 -34 355 271 60 108 chr5 26349655 26350054 -173280096 - L1MEd LINE L1 -4900 1219 840 24 0 0 0 chr5 26350223 26350247 -173279903 + AT_rich Low_complexity Low_complexity 1 24 0 1999 121 3 17 chr5 26350530 26350828 -173279322 - AluSq SINE Alu -19 294 1 370 242 44 11 chr5 26351136 26351227 -173278923 - MER58C DNA MER1_type -3 212 119 23 0 0 0 chr5 26352047 26352070 -173278080 + AT_rich Low_complexity Low_complexity 1 23 0 258 320 30 44 chr5 26352334 26352537 -173277613 + L1ME LINE L1 5536 5735 -386 1830 137 3 44 chr5 26353047 26353368 -173276782 - AluSx SINE Alu -4 308 1 23 33 0 0 chr5 26353546 26353576 -173276574 + AT_rich Low_complexity Low_complexity 1 30 0 1788 115 0 4 chr5 26353975 26354227 -173275923 + AluSq SINE Alu 3 253 -60 312 260 10 0 chr5 26354327 26354423 -173275727 + (TA)n Simple_repeat Simple_repeat 2 98 0 216 0 0 0 chr5 26354439 26354463 -173275687 + (CA)n Simple_repeat Simple_repeat 2 25 0 387 0 0 0 chr5 26354492 26354535 -173275615 + (CA)n Simple_repeat Simple_repeat 2 44 0 202 171 0 49 chr5 26355722 26355763 -173274387 + polypyrimidine Low_complexity Low_complexity 1 39 0 6177 235 45 40 chr5 26355994 26357545 -173272605 - MER89-int LTR ERV1 -270 6531 4970 2747 123 34 5 chr5 26357545 26357960 -173272190 - MSTA LTR MaLR -1 427 1 6177 235 45 40 chr5 26357960 26358040 -173272110 - MER89-int LTR ERV1 -1831 4970 4892 640 306 118 8 chr5 26358101 26358356 -173271794 - MER89-int LTR ERV1 -3866 2935 2653 * 956 244 41 69 chr5 26358328 26358718 -173271432 - MER89-int LTR ERV1 -5546 1255 877 585 242 35 135 chr5 26358934 26359194 -173270956 - MER89-int LTR ERV1 -6088 713 480 2118 216 80 11 chr5 26359194 26359658 -173270492 + MLT1D LTR MaLR 1 496 -9 27 29 0 0 chr5 26361050 26361084 -173269066 + AT_rich Low_complexity Low_complexity 1 34 0 2204 165 24 21 chr5 26361247 26361665 -173268485 + MSTA LTR MaLR 6 424 -4 827 233 17 0 chr5 26361670 26361846 -173268304 + MER58A DNA MER1_type 46 224 0 25 31 0 0 chr5 26363439 26363471 -173266679 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 26363541 26363562 -173266588 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 26363725 26363750 -173266400 + AT_rich Low_complexity Low_complexity 1 25 0 293 95 0 0 chr5 26364160 26364202 -173265948 + MLT2A1 LTR ERVL 390 431 -13 292 127 0 28 chr5 26364202 26364273 -173265877 + (TA)n Simple_repeat Simple_repeat 2 70 0 2135 122 40 92 chr5 26364308 26364734 -173265416 - MLT2A1 LTR ERVL -40 404 1 2065 213 12 2 chr5 26364734 26365143 -173265007 + MLT2C2 LTR ERVL 4 416 -48 1344 203 30 8 chr5 26365477 26365743 -173264407 - MLT1A1 LTR MaLR -80 285 14 260 210 113 0 chr5 26365755 26365817 -173264333 + Charlie1 DNA MER1_type 2675 2743 -18 220 410 50 3 chr5 26365879 26366162 -173263988 - L3 LINE CR1 -108 1469 1174 22 35 0 0 chr5 26366440 26366469 -173263681 + AT_rich Low_complexity Low_complexity 1 29 0 746 104 0 0 chr5 26366566 26366704 -173263446 - AluY SINE Alu 0 317 180 24 0 0 0 chr5 26366814 26366838 -173263312 + AT_rich Low_complexity Low_complexity 1 24 0 1930 244 84 36 chr5 26366859 26368835 -173261315 - L1MB7 LINE L1 -18 6166 3999 851 86 86 0 chr5 26368835 26368963 -173261187 + MER85 DNA T2_type 1 139 0 1930 244 84 36 chr5 26368963 26369420 -173260730 - L1MB7 LINE L1 -2185 3999 3565 1303 270 69 18 chr5 26369420 26370097 -173260053 - L1M4 LINE L1 -2354 3792 3081 * 2912 249 55 79 chr5 26370091 26370117 -173260033 - L1MC/D LINE L1 -743 5403 5378 200 35 35 0 chr5 26370117 26370146 -173260004 + (TTA)n Simple_repeat Simple_repeat 3 32 0 2912 249 55 79 chr5 26370146 26370621 -173259529 - L1MC/D LINE L1 -768 5378 4893 9490 85 15 1 chr5 26370621 26372719 -173257431 - L1PA7 LINE L1 -4 6150 4031 2912 249 55 79 chr5 26372719 26373134 -173257016 - L1MC/D LINE L1 -1253 4893 4470 2090 90 0 52 chr5 26373134 26373444 -173256706 + AluSg SINE Alu 1 294 -16 2912 249 55 79 chr5 26373444 26374361 -173255789 - L1MC/D LINE L1 -1676 4470 3726 1215 256 75 35 chr5 26374366 26375254 -173254896 - L1ME1 LINE L1 -272 5894 4964 23 54 0 0 chr5 26376444 26376481 -173253669 + AT_rich Low_complexity Low_complexity 1 37 0 2044 132 10 0 chr5 26378802 26379106 -173251044 - AluSx SINE Alu -2 310 4 280 340 40 10 chr5 26379977 26380077 -173250073 - L2 LINE L2 -7 3306 3204 537 257 80 5 chr5 26381022 26381209 -173248941 - MER67D LTR ERV1 -8 506 306 1187 176 59 99 chr5 26381253 26381577 -173248573 - MER67D LTR ERV1 -203 311 1 711 151 120 0 chr5 26382294 26382466 -173247684 - L1MA9 LINE L1 -9 6303 6112 7308 45 1 0 chr5 26382491 26384071 -173246079 - L1PA5 LINE L1 -3 6151 4570 22427 52 9 2 chr5 26384072 26386972 -173243178 + L1PA5 LINE L1 1631 4551 -1595 1417 188 71 8 chr5 26387012 26387278 -173242872 - AluJb SINE Alu -16 296 14 280 239 0 0 chr5 26387278 26387324 -173242826 - AluJ/monomer SINE Alu -254 46 1 1392 224 41 0 chr5 26387332 26387626 -173242524 - AluJo SINE Alu -6 306 1 26 0 0 0 chr5 26387665 26387691 -173242459 + AT_rich Low_complexity Low_complexity 1 26 0 243 322 112 34 chr5 26387962 26388167 -173241983 + L3 LINE CR1 888 1108 -469 552 316 116 12 chr5 26389234 26389554 -173240596 - MLT1K LTR MaLR -24 564 212 277 247 43 21 chr5 26389556 26389649 -173240501 - MLT1I LTR MaLR -8 401 307 1048 124 5 54 chr5 26390407 26390593 -173239557 + AluSg/x SINE Alu 135 311 -1 481 275 127 16 chr5 26391802 26392180 -173237970 + L1MC5 LINE L1 7327 7746 -215 240 279 62 0 chr5 26393379 26393508 -173236642 - L1ME LINE L1 -272 5849 5713 447 336 66 23 chr5 26393579 26393972 -173236178 + MLT1J1 LTR MaLR 7 416 -30 3091 221 61 29 chr5 26393982 26395836 -173234314 - L1MA9 LINE L1 -4 6330 4542 * 3342 242 15 7 chr5 26395821 26396686 -173233464 + L1 LINE L1 3304 4175 -1971 12052 217 23 77 chr5 26396723 26397094 -173233056 + L1PA15 LINE L1 1323 1712 -5104 1543 201 27 0 chr5 26397094 26397387 -173232763 - AluJb SINE Alu -11 301 1 12052 217 23 77 chr5 26397387 26397569 -173232581 + L1PA15 LINE L1 1712 1902 -4914 1953 142 23 7 chr5 26397569 26397872 -173232278 + AluSq SINE Alu 1 308 -5 12052 217 23 77 chr5 26397872 26401481 -173228669 + L1PA15 LINE L1 1902 5063 -1753 522 100 0 12 chr5 26401481 26401561 -173228589 + MADE1 DNA Mariner 2 80 0 12052 217 23 77 chr5 26401561 26403227 -173226923 + L1PA15 LINE L1 5063 6816 0 1352 189 41 43 chr5 26403286 26403678 -173226472 + L1 LINE L1 4152 4542 -1604 296 386 38 5 chr5 26404739 26404923 -173225227 - LTR33 LTR ERVL -313 208 19 704 233 85 17 chr5 26406763 26406939 -173223211 - MLT1B LTR MaLR -3 387 200 244 206 24 67 chr5 26407283 26407448 -173222702 + (TTATA)n Simple_repeat Simple_repeat 1 158 0 29 0 0 0 chr5 26407591 26407620 -173222530 + AT_rich Low_complexity Low_complexity 1 29 0 225 65 0 0 chr5 26407846 26407877 -173222273 + (TG)n Simple_repeat Simple_repeat 2 32 0 279 289 22 0 chr5 26407877 26407967 -173222183 + (TA)n Simple_repeat Simple_repeat 2 93 0 230 167 26 77 chr5 26408027 26408105 -173222045 - HsTC2 DNA Tc2 -104 1794 1721 22 56 0 0 chr5 26408139 26408175 -173221975 + AT_rich Low_complexity Low_complexity 1 36 0 6787 68 0 8 chr5 26408706 26409834 -173220316 - L1PA7 LINE L1 0 6154 5040 291 234 28 28 chr5 26409834 26409941 -173220209 + MER90 LTR ERV1 365 471 -104 532 174 146 56 chr5 26409947 26410091 -173220059 - MER39 LTR ERV1 -2 682 384 669 238 24 30 chr5 26410102 26410270 -173219880 - MER39 LTR ERV1 -201 506 340 452 252 94 16 chr5 26410392 26410519 -173219631 - MER39 LTR ERV1 -569 138 2 38 0 0 0 chr5 26410636 26410674 -173219476 + AT_rich Low_complexity Low_complexity 1 38 0 273 148 37 0 chr5 26411093 26411147 -173219003 + L1MC4 LINE L1 6648 6703 -1339 252 86 0 0 chr5 26411147 26411182 -173218968 + (TA)n Simple_repeat Simple_repeat 1 35 0 272 351 80 66 chr5 26411478 26411828 -173218322 + L2 LINE L2 2918 3272 0 490 295 52 6 chr5 26413084 26413257 -173216893 - MIR SINE MIR -14 248 68 1157 235 40 52 chr5 26413511 26413933 -173216217 - LTR56 LTR ERV1 -20 425 9 378 211 29 44 chr5 26414196 26414427 -173215723 - HERVS71 LTR ERV1 -840 5918 4646 2522 40 3 3 chr5 26415354 26415653 -173214497 + AluY SINE Alu 6 304 -7 2508 116 6 6 chr5 26416530 26416893 -173213257 - THE1B LTR MaLR 0 364 2 2079 86 7 0 chr5 26417504 26417808 -173212342 - L1P LINE L1 -860 5286 4981 3045 62 25 2 chr5 26417808 26418212 -173211938 + L1PA7 LINE L1 5730 6144 -10 1650 199 68 27 chr5 26418544 26418771 -173211379 - MSTB1 LTR MaLR 0 432 179 180 0 0 0 chr5 26418771 26418791 -173211359 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1650 199 68 27 chr5 26418791 26418976 -173211174 - MSTB1 LTR MaLR -253 179 3 284 269 65 11 chr5 26419085 26419178 -173210972 - HERVS71 LTR ERV1 -3390 5588 5491 728 224 13 70 chr5 26419431 26419659 -173210491 + L1P LINE L1 4605 4819 -1327 6154 102 20 0 chr5 26419671 26421107 -173209043 + L1PA11 LINE L1 4719 6172 -2 23 0 0 0 chr5 26422247 26422270 -173207880 + AT_rich Low_complexity Low_complexity 1 23 0 8599 116 23 2 chr5 26422504 26423761 -173206389 + HSMAR1 DNA Mariner 5 1287 0 1027 226 128 0 chr5 26424038 26424264 -173205886 - AluJo SINE Alu -56 256 2 207 0 0 0 chr5 26425984 26426007 -173204143 + (A)n Simple_repeat Simple_repeat 1 23 0 883 218 53 57 chr5 26426644 26427054 -173203096 - LTR56 LTR ERV1 0 437 44 190 317 161 41 chr5 26427954 26428345 -173201805 - L2 LINE L2 -791 2523 2086 413 291 55 12 chr5 26428406 26428571 -173201579 - LTR33A LTR ERVL -5 518 347 234 329 0 0 chr5 26429409 26429482 -173200668 - LTR16A1 LTR ERVL -11 446 374 1695 224 35 69 chr5 26430829 26430961 -173199189 - MLT1C LTR MaLR -2 465 330 2457 68 3 0 chr5 26430961 26431271 -173198879 - AluY SINE Alu 0 311 1 1695 224 35 69 chr5 26431271 26431619 -173198531 - MLT1C LTR MaLR -137 330 1 207 167 0 0 chr5 26431654 26431690 -173198460 + (TG)n Simple_repeat Simple_repeat 1 36 0 465 362 76 20 chr5 26431815 26432308 -173197842 - HERVL LTR ERVL -1900 3096 2806 27 0 0 0 chr5 26432502 26432529 -173197621 + AT_rich Low_complexity Low_complexity 1 27 0 227 37 0 0 chr5 26432792 26432819 -173197331 + L1MA1 LINE L1 6232 6258 -44 298 261 49 44 chr5 26433060 26433216 -173196934 - HERVL LTR ERVL -4083 1681 1484 233 280 108 11 chr5 26433312 26433405 -173196745 - MLT1G1 LTR MaLR -18 577 476 1956 127 0 3 chr5 26434363 26434808 -173195342 + AluY SINE Alu 1 444 0 732 151 96 36 chr5 26435174 26435340 -173194810 + MER96B DNA MER1_type? 4 179 -238 3928 176 32 7 chr5 26436789 26438084 -173192066 - L1PA15 LINE L1 -181 6635 5313 4113 249 40 31 chr5 26438152 26439396 -173190754 - L1PA15 LINE L1 -4509 2278 564 1787 198 110 0 chr5 26439470 26439853 -173190297 + MSTB1 LTR MaLR 5 429 -3 194 361 167 27 chr5 26439856 26440294 -173189856 + L2 LINE L2 926 1424 -1890 270 236 11 34 chr5 26441265 26441354 -173188796 + L1ME4a LINE L1 5970 6056 -65 3870 176 89 50 chr5 26441400 26442357 -173187793 - L1MA9 LINE L1 -30 6282 5289 637 239 15 20 chr5 26442360 26442557 -173187593 + L1MA9 LINE L1 5096 5291 -855 1860 79 35 28 chr5 26442719 26443009 -173187141 - AluY SINE Alu -19 292 1 1916 180 16 0 chr5 26443017 26443394 -173186756 - L1MB1 LINE L1 -5 6163 5781 25 0 0 0 chr5 26443846 26443871 -173186279 + AT_rich Low_complexity Low_complexity 1 25 0 2454 54 0 0 chr5 26443934 26444229 -173185921 - AluY SINE Alu -5 306 12 243 287 10 30 chr5 26444511 26444612 -173185538 + (TATATG)n Simple_repeat Simple_repeat 2 100 0 38 51 0 0 chr5 26444741 26444800 -173185350 + AT_rich Low_complexity Low_complexity 1 59 0 26 93 0 0 chr5 26445033 26445108 -173185042 + AT_rich Low_complexity Low_complexity 1 75 0 22 35 0 0 chr5 26445407 26445436 -173184714 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 26445497 26445521 -173184629 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr5 26445562 26445600 -173184550 + AT_rich Low_complexity Low_complexity 1 38 0 214 270 0 0 chr5 26446975 26447038 -173183112 + T-rich Low_complexity Low_complexity 1 63 0 230 95 0 24 chr5 26447156 26447198 -173182952 + Alu SINE Alu 241 281 -20 1418 185 22 25 chr5 26447298 26447574 -173182576 + AluJb SINE Alu 38 312 0 9976 164 48 3 chr5 26447733 26448340 -173181810 + Tigger1 DNA MER2_type 1 579 -1839 1885 86 4 0 chr5 26448340 26448584 -173181566 + AluY SINE Alu 51 295 -16 9976 164 48 3 chr5 26448584 26449788 -173180362 + Tigger1 DNA MER2_type 579 1893 -525 6070 64 232 72 chr5 26449789 26450880 -173179270 - MER11A LTR ERVK 0 1266 1 2596 183 27 9 chr5 26450880 26451401 -173178749 + Tigger1 DNA MER2_type 1889 2418 0 1384 328 64 19 chr5 26452048 26452561 -173177589 + L1M4b LINE L1 182 717 -6142 1187 241 13 77 chr5 26452564 26452954 -173177196 + MLT1A2 LTR MaLR 4 368 -6 3286 259 66 24 chr5 26452960 26454637 -173175513 + L1M4b LINE L1 713 2493 -4464 1016 209 27 128 chr5 26454676 26455082 -173175068 - MLT1A1 LTR MaLR 0 365 1 1183 290 36 32 chr5 26455157 26456198 -173173952 + L1M4b LINE L1 2469 3467 -3490 494 310 70 20 chr5 26456271 26456574 -173173576 - L1ME LINE L1 -4999 1071 751 23 0 0 0 chr5 26456630 26456653 -173173497 + AT_rich Low_complexity Low_complexity 1 23 0 212 211 19 19 chr5 26457128 26457180 -173172970 + (TATG)n Simple_repeat Simple_repeat 4 55 0 369 0 0 0 chr5 26457511 26457552 -173172598 + (CA)n Simple_repeat Simple_repeat 2 42 0 28 0 0 0 chr5 26458321 26458349 -173171801 + AT_rich Low_complexity Low_complexity 1 28 0 969 244 103 53 chr5 26458742 26459082 -173171068 + MER57A LTR ERV1 47 403 0 729 280 55 21 chr5 26459085 26459321 -173170829 + MER57A-int LTR ERV1 3 246 -7291 21 36 0 0 chr5 26459939 26459967 -173170183 + AT_rich Low_complexity Low_complexity 1 28 0 202 152 0 0 chr5 26460151 26460165 -173169985 + (CAAA)n Simple_repeat Simple_repeat 2 15 -19 1921 167 0 3 chr5 26460165 26460476 -173169674 + AluSx SINE Alu 1 310 -2 202 152 0 0 chr5 26460476 26460494 -173169656 + (CAAA)n Simple_repeat Simple_repeat 14 34 0 973 222 125 27 chr5 26460543 26460872 -173169278 + MER57A-int LTR ERV1 1066 1426 -3510 1908 158 0 3 chr5 26460880 26461165 -173168985 + AluSx SINE Alu 4 287 -25 657 144 10 0 chr5 26461358 26461462 -173168688 + MER34 LTR ERV1 133 237 -305 360 219 0 0 chr5 26461462 26461526 -173168624 + MER34 LTR ERV1 476 539 -3 1544 328 25 28 chr5 26461783 26462503 -173167647 + MER57-int LTR ERV1 6253 6970 -567 862 182 158 111 chr5 26462727 26463068 -173167082 + MER57A LTR ERV1 45 401 -2 241 152 0 0 chr5 26463777 26463823 -173166327 - LTR66 LTR ERVL -171 439 394 611 231 86 27 chr5 26464477 26464663 -173165487 - MER105 DNA DNA -2 202 6 22 0 0 0 chr5 26465213 26465235 -173164915 + AT_rich Low_complexity Low_complexity 1 22 0 190 364 26 0 chr5 26465271 26465348 -173164802 + MIR SINE MIR 74 152 -110 21 36 0 0 chr5 26466913 26466941 -173163209 + AT_rich Low_complexity Low_complexity 1 28 0 32 26 0 0 chr5 26467024 26467063 -173163087 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr5 26469755 26469778 -173160372 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 26470118 26470139 -173160011 + AT_rich Low_complexity Low_complexity 1 21 0 243 234 130 0 chr5 26470563 26470640 -173159510 + L1MC/D LINE L1 5728 5814 -1994 22 35 0 0 chr5 26471022 26471051 -173159099 + AT_rich Low_complexity Low_complexity 1 29 0 186 133 0 0 chr5 26471504 26471534 -173158616 + (TG)n Simple_repeat Simple_repeat 1 30 0 201 121 0 0 chr5 26471877 26471910 -173158240 + (CA)n Simple_repeat Simple_repeat 2 34 0 358 309 0 0 chr5 26473922 26474006 -173156144 + MLT1E LTR MaLR 324 407 -186 1139 234 53 30 chr5 26474387 26474780 -173155370 - LTR52 LTR ERVL -19 402 1 535 324 48 20 chr5 26474902 26475152 -173154998 - MLT1H LTR MaLR -292 257 1 22 35 0 0 chr5 26475935 26475964 -173154186 + AT_rich Low_complexity Low_complexity 1 29 0 25 51 0 0 chr5 26476156 26476195 -173153955 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 26476975 26476997 -173153153 + AT_rich Low_complexity Low_complexity 1 22 0 1359 229 104 69 chr5 26477307 26477842 -173152308 + Charlie1 DNA MER1_type 47 609 -2152 1280 238 13 17 chr5 26477842 26478127 -173152023 + AluJo SINE Alu 1 287 -15 202 39 0 0 chr5 26478127 26478153 -173151997 + (TAA)n Simple_repeat Simple_repeat 2 180 0 1280 238 13 17 chr5 26478153 26478169 -173151981 + AluJo SINE Alu 287 302 0 1359 229 104 69 chr5 26478169 26478258 -173151892 + Charlie1 DNA MER1_type 609 693 -2068 291 182 80 34 chr5 26478261 26478349 -173151801 + Charlie1 DNA MER1_type 921 1012 -1749 1109 221 130 109 chr5 26478365 26478881 -173151269 + Charlie1 DNA MER1_type 1622 2126 -635 2278 62 0 3 chr5 26478881 26479171 -173150979 + AluY SINE Alu 1 289 -22 1109 221 130 109 chr5 26479171 26479440 -173150710 + Charlie1 DNA MER1_type 2126 2388 -373 1778 136 38 14 chr5 26479440 26479727 -173150423 - AluSx SINE Alu -6 306 13 1109 221 130 109 chr5 26479727 26479813 -173150337 + Charlie1 DNA MER1_type 2388 2471 -290 1938 138 37 0 chr5 26479813 26480110 -173150040 - AluSx SINE Alu -4 308 1 1109 221 130 109 chr5 26480110 26480274 -173149876 + Charlie1 DNA MER1_type 2471 2681 -80 560 68 11 23 chr5 26480274 26480362 -173149788 - L1MA3 LINE L1 -13 6292 6206 26 30 0 0 chr5 26480373 26480406 -173149744 + AT_rich Low_complexity Low_complexity 1 33 0 314 156 104 65 chr5 26480729 26480806 -173149344 - Charlie1 DNA MER1_type 0 2761 2682 5130 173 23 8 chr5 26480807 26482652 -173147498 - L1MA3 LINE L1 -156 6149 4273 24 32 0 0 chr5 26482698 26482729 -173147421 + AT_rich Low_complexity Low_complexity 1 31 0 42565 36 21 1 chr5 26483580 26489612 -173140538 - L1PA3 LINE L1 0 6155 2 24 0 0 0 chr5 26490033 26490057 -173140093 + AT_rich Low_complexity Low_complexity 1 24 0 311 171 29 0 chr5 26491793 26491863 -173138287 + (TATG)n Simple_repeat Simple_repeat 4 75 0 1927 154 148 13 chr5 26492615 26492992 -173137158 + MSTA LTR MaLR 1 428 0 26 50 0 0 chr5 26493392 26493432 -173136718 + AT_rich Low_complexity Low_complexity 1 40 0 206 265 0 0 chr5 26493485 26493534 -173136616 + (TA)n Simple_repeat Simple_repeat 2 50 0 210 208 0 0 chr5 26494109 26494157 -173135993 + CT-rich Low_complexity Low_complexity 5 52 0 1904 131 45 0 chr5 26494659 26494778 -173135372 + AluSq SINE Alu 1 113 -200 887 0 0 10 chr5 26494778 26494882 -173135268 + (TAAAA)n Simple_repeat Simple_repeat 2 104 0 1904 131 45 0 chr5 26494882 26495053 -173135097 + AluSq SINE Alu 113 304 -9 22 0 0 0 chr5 26495097 26495119 -173135031 + AT_rich Low_complexity Low_complexity 1 22 0 245 273 42 79 chr5 26495285 26495450 -173134700 + MLT1L LTR MaLR 417 575 -40 21 36 0 0 chr5 26495575 26495603 -173134547 + AT_rich Low_complexity Low_complexity 1 28 0 2282 107 0 0 chr5 26496090 26496400 -173133750 - AluSg SINE Alu 0 310 1 24 0 0 0 chr5 26497815 26497839 -173132311 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr5 26498863 26498886 -173131264 + AT_rich Low_complexity Low_complexity 1 23 0 210 171 0 0 chr5 26498938 26498973 -173131177 + A-rich Low_complexity Low_complexity 1 35 0 199 333 42 85 chr5 26499577 26499766 -173130384 + L3 LINE CR1 538 718 -859 588 263 44 35 chr5 26500064 26500292 -173129858 - MER115 DNA AcHobo -10 683 454 348 336 137 38 chr5 26500289 26500581 -173129569 - LTR16A1 LTR ERVL -136 321 1 * 1250 359 70 32 chr5 26500708 26501942 -173128208 - ERVL LTR ERVL -380 5384 4103 434 333 46 56 chr5 26502075 26502469 -173127681 - ERVL LTR ERVL -1892 3872 3483 2272 180 31 10 chr5 26502686 26503103 -173127047 + MSTB LTR MaLR 1 426 0 367 283 19 0 chr5 26503481 26503587 -173126563 + HERV16 LTR ERVL 2683 2790 -2206 339 44 0 0 chr5 26503589 26503634 -173126516 + (CA)n Simple_repeat Simple_repeat 2 46 0 236 250 17 0 chr5 26503738 26503798 -173126352 - LTR16A1 LTR ERVL -385 72 12 2084 99 45 3 chr5 26504063 26504355 -173125795 - AluSc SINE Alu -4 305 2 23 33 0 0 chr5 26504614 26504644 -173125506 + AT_rich Low_complexity Low_complexity 1 30 0 30 45 0 0 chr5 26504831 26504875 -173125275 + AT_rich Low_complexity Low_complexity 1 44 0 802 71 18 0 chr5 26504976 26505088 -173125062 + L1PA7 LINE L1 6038 6151 -3 1095 255 59 47 chr5 26505094 26505603 -173124547 - L1ME1 LINE L1 -5 6161 5647 201 245 43 0 chr5 26505608 26505702 -173124448 + T-rich Low_complexity Low_complexity 4 101 0 * 292 260 35 0 chr5 26505655 26505824 -173124326 + (TA)n Simple_repeat Simple_repeat 1 175 0 593 270 53 11 chr5 26505856 26506045 -173124105 - L1ME1 LINE L1 -1886 4260 4064 1962 130 16 3 chr5 26506045 26506353 -173123797 - THE1C LTR MaLR 0 375 64 2301 64 30 0 chr5 26506737 26507034 -173123116 - AluY SINE Alu -5 306 1 197 277 0 0 chr5 26507784 26507831 -173122319 + MER5A DNA MER1_type 140 186 -3 23 0 0 0 chr5 26508415 26508438 -173121712 + AT_rich Low_complexity Low_complexity 1 23 0 317 24 24 0 chr5 26508793 26508835 -173121315 + (GGA)n Simple_repeat Simple_repeat 3 45 0 949 40 8 16 chr5 26508841 26508965 -173121185 + L1PA5 LINE L1 6027 6149 -5 24 53 0 0 chr5 26508978 26509016 -173121134 + AT_rich Low_complexity Low_complexity 1 38 0 728 168 0 23 chr5 26509031 26509162 -173120988 - FLAM_C SINE Alu -5 128 1 1400 132 5 0 chr5 26509176 26509396 -173120754 - L1PA13 LINE L1 -4 6159 5939 1256 229 29 58 chr5 26509463 26509839 -173120311 - MLT1A1 LTR MaLR 0 365 1 28 0 0 0 chr5 26510005 26510033 -173120117 + AT_rich Low_complexity Low_complexity 1 28 0 1196 235 104 22 chr5 26510168 26510534 -173119616 + MSTD LTR MaLR 1 396 0 9881 207 26 25 chr5 26510698 26511484 -173118666 + L1 LINE L1 2921 3705 -2458 1427 176 81 31 chr5 26511484 26511841 -173118309 + THE1C LTR MaLR 1 375 0 9881 207 26 25 chr5 26511841 26513548 -173116602 + L1 LINE L1 3705 5420 -743 650 268 6 28 chr5 26513659 26513859 -173116291 - MLT2C1 LTR ERVL -37 427 164 1267 125 0 0 chr5 26513861 26514045 -173116105 + AluSc SINE Alu 126 309 0 608 238 6 25 chr5 26514061 26514174 -173115976 - MLT2C1 LTR ERVL -227 170 59 13007 171 21 3 chr5 26514174 26516549 -173113601 - Tigger1 DNA MER2_type 0 2418 1 608 238 6 25 chr5 26516549 26516595 -173113555 - MLT2C1 LTR ERVL -338 59 14 1901 100 89 0 chr5 26517317 26517587 -173112563 + AluSg SINE Alu 1 294 -16 4298 170 36 26 chr5 26518139 26519357 -173110793 + L1PA16 LINE L1 4930 6161 -5 928 163 48 12 chr5 26519530 26519696 -173110454 - MLT2B2 LTR ERVL -343 172 1 24 0 0 0 chr5 26519848 26519872 -173110278 + AT_rich Low_complexity Low_complexity 1 24 0 29 28 0 0 chr5 26520540 26520576 -173109574 + AT_rich Low_complexity Low_complexity 1 36 0 216 286 0 0 chr5 26521299 26521362 -173108788 + T-rich Low_complexity Low_complexity 1 63 0 228 293 24 24 chr5 26522424 26522506 -173107644 - MER96 DNA MER1_type? -93 82 1 290 255 39 29 chr5 26522627 26522729 -173107421 + L1MEc LINE L1 1542 1644 -4752 441 304 101 29 chr5 26523211 26523637 -173106513 + L1MEc LINE L1 2148 2576 -3639 387 269 70 57 chr5 26523753 26523952 -173106198 + L1MEc LINE L1 2713 2920 -3295 1833 170 0 0 chr5 26523952 26524274 -173105876 + AluSx SINE Alu 1 322 0 387 269 70 57 chr5 26524274 26524374 -173105776 + L1MEc LINE L1 2920 3017 -3198 529 314 122 45 chr5 26524376 26524911 -173105239 + L1MEc LINE L1 3700 4275 -1940 30 0 0 0 chr5 26524948 26524978 -173105172 + AT_rich Low_complexity Low_complexity 1 30 0 1403 119 0 0 chr5 26525107 26525301 -173104849 + AluY SINE Alu 95 288 -23 5302 138 22 9 chr5 26525301 26526446 -173103704 + L1PA14 LINE L1 5002 6161 0 33441 48 27 2 chr5 26526806 26532781 -173097369 - L1PA2 LINE L1 -2 6153 7 215 372 13 0 chr5 26533500 26533578 -173096572 + MER5B DNA MER1_type 49 127 -51 1462 165 135 15 chr5 26533688 26534021 -173096129 - THE1C LTR MaLR 0 375 3 8065 165 25 55 chr5 26534023 26535649 -173094501 - THE1C-int LTR MaLR 0 1580 4 1852 158 61 25 chr5 26535652 26536014 -173094136 - THE1C LTR MaLR 0 375 1 1419 208 10 20 chr5 26536105 26536398 -173093752 - AluJo SINE Alu -22 290 1 26 30 0 0 chr5 26536632 26536665 -173093485 + AT_rich Low_complexity Low_complexity 1 33 0 2526 86 8 6 chr5 26537200 26537551 -173092599 + THE1A LTR MaLR 1 352 -3 1308 270 83 61 chr5 26537881 26538008 -173092142 - L1MC4 LINE L1 -151 7891 7768 1744 165 29 38 chr5 26538008 26538323 -173091827 + AluSx SINE Alu 1 312 0 1308 270 83 61 chr5 26538323 26538835 -173091315 - L1MC4 LINE L1 -274 7768 7238 711 271 127 66 chr5 26538842 26539329 -173090821 - L1MC4a LINE L1 -811 6997 6481 278 337 111 12 chr5 26539782 26539954 -173090196 - L2 LINE L2 0 3313 3125 196 361 0 0 chr5 26540112 26540173 -173089977 - L2 LINE L2 -556 2758 2698 585 296 13 52 chr5 26540226 26540308 -173089842 + MER58A DNA MER1_type 1 85 -2335 877 261 61 68 chr5 26540308 26540703 -173089447 - MSTD LTR MaLR -2 394 3 585 296 13 52 chr5 26540703 26540853 -173089297 + MER58A DNA MER1_type 85 224 0 284 203 107 7 chr5 26541040 26541147 -173089003 - L1MCc LINE L1 -4871 1551 1440 976 292 88 23 chr5 26541179 26541610 -173088540 - L1MCc LINE L1 -5222 1201 743 516 291 72 52 chr5 26541652 26541903 -173088247 - L1MCc LINE L1 -5825 598 343 254 241 36 28 chr5 26542259 26542373 -173087777 - L1ME LINE L1 -540 5626 5518 215 330 68 0 chr5 26543243 26543346 -173086804 - MIR SINE MIR -71 191 82 262 236 34 67 chr5 26543575 26543664 -173086486 + L2 LINE L2 3184 3269 -3 23 33 0 0 chr5 26543744 26543774 -173086376 + AT_rich Low_complexity Low_complexity 1 30 0 30 83 0 0 chr5 26543955 26544027 -173086123 + AT_rich Low_complexity Low_complexity 1 72 0 23 101 0 0 chr5 26544143 26544222 -173085928 + AT_rich Low_complexity Low_complexity 1 79 0 21 0 0 0 chr5 26544737 26544758 -173085392 + AT_rich Low_complexity Low_complexity 1 21 0 1822 155 75 31 chr5 26545880 26546229 -173083921 + THE1B LTR MaLR 1 364 0 11332 113 1 0 chr5 26546229 26547808 -173082342 + THE1B-int LTR MaLR 1 1580 0 2128 134 73 20 chr5 26547810 26548154 -173081996 + THE1B LTR MaLR 3 364 0 1714 175 0 4 chr5 26548570 26548850 -173081300 - AluSx SINE Alu -23 289 11 1980 151 7 0 chr5 26548923 26549214 -173080936 + AluSq SINE Alu 3 295 -18 2111 116 0 0 chr5 26550404 26550724 -173079426 + AluSx SINE Alu 1 320 0 184 339 100 23 chr5 26550973 26551103 -173079047 + MIR SINE MIR 48 187 -75 25 0 0 0 chr5 26551303 26551328 -173078822 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 26551787 26551818 -173078332 + AT_rich Low_complexity Low_complexity 1 31 0 891 143 26 0 chr5 26552081 26552235 -173077915 + MER2 DNA MER2_type 56 213 -132 1589 234 31 50 chr5 26552961 26553443 -173076707 + MLT1D LTR MaLR 26 498 -7 2113 121 7 0 chr5 26554027 26554325 -173075825 - AluSx SINE Alu -12 300 1 4060 204 19 38 chr5 26554437 26555979 -173074171 + L1MA4 LINE L1 4591 6166 -5 29 84 0 0 chr5 26555986 26556057 -173074093 + AT_rich Low_complexity Low_complexity 1 71 0 40 67 0 0 chr5 26556186 26556261 -173073889 + AT_rich Low_complexity Low_complexity 1 75 0 289 236 0 47 chr5 26556557 26556684 -173073466 + A-rich Low_complexity Low_complexity 4 124 0 1168 340 88 75 chr5 26559014 26560511 -173069639 + ERVL LTR ERVL 1491 3074 -2637 2410 74 7 3 chr5 26560511 26560820 -173069330 + AluY SINE Alu 1 310 -1 1168 340 88 75 chr5 26560820 26561201 -173068949 + ERVL LTR ERVL 3074 3449 -2262 401 339 67 38 chr5 26561293 26561665 -173068485 + ERVL LTR ERVL 3564 3946 -1708 309 371 59 11 chr5 26563106 26563292 -173066858 + LTR16C LTR ERVL 297 491 0 2057 119 37 11 chr5 26563453 26563805 -173066345 - MER4A-int LTR ERV1 -1846 4752 4392 3357 83 40 2 chr5 26563812 26564282 -173065868 - L1PA7 LINE L1 -2 6152 5665 2606 77 0 0 chr5 26564282 26564631 -173065519 + L1P LINE L1 4911 5259 -887 2604 144 73 32 chr5 26564631 26565166 -173064984 - MER4A-int LTR ERV1 -2205 4393 3837 1004 169 42 35 chr5 26565167 26565427 -173064723 - MER4A-int LTR ERV1 -2919 3679 3418 1018 167 46 82 chr5 26565443 26566043 -173064107 - MER4A-int LTR ERV1 -2430 3273 1919 1304 160 72 0 chr5 26566045 26566282 -173063868 + LTR8 LTR ERV1 4 257 -434 3761 105 65 27 chr5 26566282 26566987 -173063163 - MER4A-int LTR ERV1 -4103 2495 1764 384 22 0 0 chr5 26566992 26567037 -173063113 + (CA)n Simple_repeat Simple_repeat 2 46 0 4319 115 25 31 chr5 26567037 26567946 -173062204 - MER4A-int LTR ERV1 -5611 1147 189 817 247 33 2 chr5 26567963 26568168 -173061982 - MER4A-int LTR ERV1 -3512 2434 1987 231 260 60 30 chr5 26568195 26568295 -173061855 - L2 LINE L2 -1519 1795 1693 2409 110 156 37 chr5 26568410 26568891 -173061259 - MER4A-int LTR ERV1 -5912 686 65 5018 82 28 3 chr5 26568891 26569595 -173060555 + LTR30 LTR ERV1 1 722 0 2409 110 156 37 chr5 26569595 26569669 -173060481 - MER4A-int LTR ERV1 -6533 65 1 1779 130 3 78 chr5 26569672 26570045 -173060105 - MER4A LTR ERV1 0 664 261 657 121 0 10 chr5 26570045 26570144 -173060006 - MER4A LTR ERV1 -566 98 1 1239 261 71 60 chr5 26570150 26570787 -173059363 - L1MC4a LINE L1 -1900 5908 5265 245 328 17 9 chr5 26571175 26571291 -173058859 - L1MC4a LINE L1 -1319 4827 4711 2002 125 4 0 chr5 26571479 26571793 -173058357 - AluSx SINE Alu 0 319 5 61 90 0 0 chr5 26572696 26572862 -173057288 + AT_rich Low_complexity Low_complexity 1 166 0 6215 150 56 18 chr5 26573215 26574400 -173055750 - Tigger3b DNA MER2_type -1 1230 1 243 133 0 0 chr5 26574468 26574513 -173055637 + L1MA8 LINE L1 6243 6287 -4 4439 182 12 11 chr5 26574543 26575399 -173054751 + L1PA16 LINE L1 5301 6157 -9 1554 158 33 39 chr5 26575388 26575723 -173054427 + L1MA8 LINE L1 5938 6270 -21 * 246 236 0 0 chr5 26576092 26576147 -173054003 + L1MA8 LINE L1 6057 6111 -180 41 48 0 0 chr5 26576153 26576215 -173053935 + AT_rich Low_complexity Low_complexity 1 62 0 197 0 0 67 chr5 26576423 26576453 -173053697 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 2452 99 14 3 chr5 26576456 26576801 -173053349 - L1PA10 LINE L1 -30 6138 5790 2830 101 5 5 chr5 26576803 26577218 -173052932 + L1PA10 LINE L1 5372 5786 -382 6353 191 8 6 chr5 26577527 26578819 -173051331 - L1P LINE L1 -1578 4883 3589 29 47 0 0 chr5 26579084 26579127 -173051023 + AT_rich Low_complexity Low_complexity 1 43 0 5762 119 13 11 chr5 26579207 26580493 -173049657 - L1PA13 LINE L1 -2 6161 4870 1585 232 76 19 chr5 26580947 26581409 -173048741 + L1MD2 LINE L1 5860 6347 -12 492 242 50 28 chr5 26581803 26581985 -173048165 + MER106A DNA MER1_type 51 236 0 1409 251 38 15 chr5 26582034 26582508 -173047642 + Charlie1b DNA MER1_type 5 489 -34 2127 130 22 33 chr5 26582896 26583264 -173046886 + THE1B LTR MaLR 1 364 0 30 59 0 0 chr5 26583444 26583495 -173046655 + AT_rich Low_complexity Low_complexity 1 51 0 24 67 0 0 chr5 26583557 26583602 -173046548 + AT_rich Low_complexity Low_complexity 1 45 0 20148 136 13 16 chr5 26584657 26587126 -173043024 - L1PA8A LINE L1 -28 6418 3984 2047 103 0 7 chr5 26587126 26587434 -173042716 + AluSg SINE Alu 1 306 0 20148 136 13 16 chr5 26587434 26589207 -173040943 - L1PA8A LINE L1 -2462 3984 2206 6205 232 8 39 chr5 26589310 26591208 -173038942 - L1P3 LINE L1 -3834 2627 756 6929 160 39 21 chr5 26591312 26591587 -173038563 - L1PA8A LINE L1 -4734 1141 873 198 71 0 0 chr5 26591587 26591615 -173038535 + (TTG)n Simple_repeat Simple_repeat 1 28 0 6929 160 39 21 chr5 26591615 26592812 -173037338 - L1PA8A LINE L1 -5002 873 4 28 29 0 0 chr5 26592825 26592860 -173037290 + AT_rich Low_complexity Low_complexity 1 35 0 2244 72 0 0 chr5 26593416 26593692 -173036458 - AluY SINE Alu -2 309 34 322 345 110 16 chr5 26593879 26594198 -173035952 + LTR33 LTR ERVL 166 514 -7 27 73 0 0 chr5 26594469 26594524 -173035626 + AT_rich Low_complexity Low_complexity 1 55 0 22 35 0 0 chr5 26594584 26594613 -173035537 + AT_rich Low_complexity Low_complexity 1 29 0 2129 172 15 32 chr5 26594695 26595166 -173034984 - L1MB1 LINE L1 -1 6167 5705 3478 205 47 56 chr5 26595167 26595830 -173034320 - L1MB1 LINE L1 -2126 4020 3369 1780 119 119 39 chr5 26595830 26596167 -173033983 + THE1B LTR MaLR 1 364 0 3478 205 47 56 chr5 26596167 26596534 -173033616 - L1MB1 LINE L1 -2777 3369 3000 * 4017 213 59 15 chr5 26596533 26597960 -173032190 + L1MA9 LINE L1 4792 6283 -29 23 33 0 0 chr5 26597970 26598000 -173032150 + AT_rich Low_complexity Low_complexity 1 30 0 846 174 92 5 chr5 26599446 26599642 -173030508 + MER109 Unknown Unknown 542 754 -1678 275 302 28 0 chr5 26599859 26599965 -173030185 - HsTC2 DNA Tc2 -1786 112 4 511 271 24 24 chr5 26603456 26603592 -173026558 - L1MA10 LINE L1 -41 6293 6155 243 61 0 0 chr5 26603592 26603625 -173026525 + (TG)n Simple_repeat Simple_repeat 2 34 0 511 271 24 24 chr5 26603625 26603658 -173026492 - L1MA10 LINE L1 -178 6156 6124 6820 50 14 8 chr5 26603683 26604642 -173025508 + L1PA5 LINE L1 5183 6146 -8 2382 140 12 22 chr5 26604645 26605058 -173025092 + L1P4 LINE L1 5315 5723 -443 3143 196 57 40 chr5 26605072 26605815 -173024335 - L1MB1 LINE L1 -139 6029 5288 185 35 69 0 chr5 26605815 26605844 -173024306 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3143 196 57 40 chr5 26605844 26605926 -173024224 - L1MB1 LINE L1 -880 5288 5209 41 21 0 0 chr5 26605930 26605978 -173024172 + AT_rich Low_complexity Low_complexity 1 48 0 1710 172 40 0 chr5 26606039 26606336 -173023814 + AluJb SINE Alu 1 309 -3 1964 74 0 0 chr5 26606685 26606964 -173023186 + AluY SINE Alu 39 317 0 1924 123 5 115 chr5 26607321 26607695 -173022455 + MER1B DNA MER1_type 3 335 -4 388 93 27 0 chr5 26608725 26608800 -173021350 + (TA)n Simple_repeat Simple_repeat 1 77 0 683 147 202 23 chr5 26608800 26608929 -173021221 + AluSg/x SINE Alu 135 286 -24 21 0 0 0 chr5 26608952 26608973 -173021177 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 26610153 26610175 -173019975 + AT_rich Low_complexity Low_complexity 1 22 0 713 288 5 26 chr5 26610401 26610592 -173019558 + Tigger3(Golem) DNA MER2_type 1 187 -2842 208 231 22 66 chr5 26611488 26611579 -173018571 + MIR SINE MIR 122 208 -54 14541 122 32 14 chr5 26611771 26614064 -173016086 + MER109 Unknown Unknown 100 2432 0 1052 193 18 14 chr5 26614576 26614794 -173015356 - AluJo SINE Alu -5 307 89 372 264 95 7 chr5 26615711 26615859 -173014291 - MER90 LTR ERV1 -283 292 132 1920 217 20 80 chr5 26616059 26616648 -173013502 + MLT2B3 LTR ERVL 1 554 0 198 0 0 0 chr5 26616649 26616671 -173013479 + (TG)n Simple_repeat Simple_repeat 2 23 0 212 260 13 0 chr5 26617323 26617400 -173012750 + (TA)n Simple_repeat Simple_repeat 2 79 0 290 186 12 31 chr5 26617411 26617572 -173012578 + (TA)n Simple_repeat Simple_repeat 2 159 0 805 212 61 39 chr5 26617600 26617782 -173012368 - MER46A DNA MER2_type -2495 236 46 2371 77 0 3 chr5 26617782 26618082 -173012068 + AluY SINE Alu 1 299 -12 805 212 61 39 chr5 26618082 26618130 -173012020 - MER46A DNA MER2_type -2685 46 1 1430 147 52 34 chr5 26618557 26618893 -173011257 + Tigger3(Golem) DNA MER2_type 1 2981 -48 21 0 0 0 chr5 26619758 26619779 -173010371 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr5 26619996 26620016 -173010134 + (GA)n Simple_repeat Simple_repeat 1 20 0 4777 162 23 13 chr5 26620110 26620609 -173009541 - L1MA8 LINE L1 -5 6286 5772 2181 112 0 0 chr5 26620609 26620620 -173009530 - AluSx SINE Alu -16 296 286 369 0 0 0 chr5 26620620 26620661 -173009489 + (TATG)n Simple_repeat Simple_repeat 2 42 0 2181 112 0 0 chr5 26620661 26620945 -173009205 - AluSx SINE Alu -25 287 1 4777 162 23 13 chr5 26620945 26621360 -173008790 - L1MA8 LINE L1 -519 5772 5363 5922 127 88 67 chr5 26621677 26623646 -173006504 - pTR5 LTR ERV1 0 2438 741 2428 197 22 15 chr5 26625845 26626383 -173003767 - L1MC3 LINE L1 -7 7778 7237 469 155 32 75 chr5 26626387 26626644 -173003506 + (TATAG)n Simple_repeat Simple_repeat 1 246 0 229 122 68 0 chr5 26626856 26626930 -173003220 + (TTATA)n Simple_repeat Simple_repeat 1 79 0 31 58 0 0 chr5 26627189 26627241 -173002909 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr5 26627409 26627431 -173002719 + AT_rich Low_complexity Low_complexity 1 22 0 184 197 13 13 chr5 26627756 26627832 -173002318 + (TA)n Simple_repeat Simple_repeat 2 77 0 258 185 0 31 chr5 26628204 26628269 -173001881 + (TAAA)n Simple_repeat Simple_repeat 1 63 0 483 325 90 62 chr5 26629092 26629625 -173000525 + ERVL LTR ERVL 906 1453 -4311 1516 123 58 0 chr5 26629790 26630051 -173000099 - L1MA5A LINE L1 -4 6293 6018 313 92 0 46 chr5 26630265 26630312 -172999838 + (TTTTTA)n Simple_repeat Simple_repeat 3 48 -16 6140 10 0 0 chr5 26630312 26631005 -172999145 - L1PA3 LINE L1 0 6155 5463 313 92 0 46 chr5 26631005 26631022 -172999128 + (TTTTTA)n Simple_repeat Simple_repeat 48 64 0 213 222 0 0 chr5 26631156 26631219 -172998931 + (CATA)n Simple_repeat Simple_repeat 2 64 0 192 40 0 0 chr5 26631219 26631244 -172998906 + (TG)n Simple_repeat Simple_repeat 2 26 0 276 270 144 0 chr5 26632396 26632507 -172997643 - L1ME LINE L1 -433 5688 5562 25 0 0 0 chr5 26632698 26632723 -172997427 + AT_rich Low_complexity Low_complexity 1 25 0 228 133 89 0 chr5 26632735 26632780 -172997370 + L2 LINE L2 3265 3313 0 21 0 0 0 chr5 26634884 26634905 -172995245 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 26634962 26634984 -172995166 + AT_rich Low_complexity Low_complexity 1 22 0 1751 162 33 16 chr5 26635326 26636049 -172994101 + L1PA13 LINE L1 1 1895 -4892 * 14442 211 33 11 chr5 26636047 26637711 -172992439 + L1P LINE L1 2614 4240 -2557 255 79 0 0 chr5 26637711 26637749 -172992401 + (CA)n Simple_repeat Simple_repeat 2 39 0 14442 211 33 11 chr5 26637749 26639066 -172991084 + L1P LINE L1 4240 5680 -1117 2125 100 4 0 chr5 26639066 26639366 -172990784 + AluY SINE Alu 1 301 0 14442 211 33 11 chr5 26639366 26639742 -172990408 + L1P LINE L1 5680 6046 -751 497 158 73 0 chr5 26639743 26639825 -172990325 + AluS SINE Alu 1 88 -225 208 286 22 11 chr5 26640223 26640314 -172989836 + (TA)n Simple_repeat Simple_repeat 1 92 0 24 77 0 0 chr5 26640502 26640554 -172989596 + AT_rich Low_complexity Low_complexity 1 52 0 22 70 0 0 chr5 26641633 26641676 -172988474 + AT_rich Low_complexity Low_complexity 1 43 0 2850 6 0 0 chr5 26641703 26642015 -172988135 + AluYb8 SINE Alu 1 312 -6 27 49 0 0 chr5 26643152 26643193 -172986957 + AT_rich Low_complexity Low_complexity 1 41 0 216 196 11 22 chr5 26644075 26644167 -172985983 + (TA)n Simple_repeat Simple_repeat 2 92 0 540 130 16 49 chr5 26644183 26644368 -172985782 + (TA)n Simple_repeat Simple_repeat 2 180 0 230 242 22 22 chr5 26644384 26644475 -172985675 - L1MC4 LINE L1 -1338 6704 6614 225 146 0 0 chr5 26644479 26644520 -172985630 + LTR66 LTR ERVL 398 438 -172 243 156 13 52 chr5 26644541 26644618 -172985532 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 25 0 0 0 chr5 26645155 26645180 -172984970 + AT_rich Low_complexity Low_complexity 1 25 0 232 188 94 16 chr5 26645218 26645282 -172984868 - MLT1H LTR MaLR 0 549 481 2314 68 0 7 chr5 26645464 26645756 -172984394 - AluY SINE Alu -19 292 3 265 277 66 36 chr5 26645807 26645944 -172984206 - MLT1H LTR MaLR -406 143 3 244 302 107 65 chr5 26646004 26646219 -172983931 + LTR16A LTR ERVL 25 248 -202 398 237 58 64 chr5 26647517 26647690 -172982460 - MLT1H LTR MaLR -375 174 3 263 356 25 0 chr5 26647854 26647972 -172982178 + L2 LINE L2 2342 2462 -852 189 0 0 0 chr5 26648288 26648309 -172981841 + (T)n Simple_repeat Simple_repeat 1 21 0 22 35 0 0 chr5 26648759 26648788 -172981362 + AT_rich Low_complexity Low_complexity 1 29 0 27 49 0 0 chr5 26649356 26649397 -172980753 + AT_rich Low_complexity Low_complexity 1 41 0 24 32 0 0 chr5 26649509 26649540 -172980610 + AT_rich Low_complexity Low_complexity 1 31 0 304 244 31 75 chr5 26649665 26649825 -172980325 - L1MEc LINE L1 -5066 1330 1178 237 288 59 20 chr5 26649847 26650000 -172980150 - L1M2c LINE L1 -4809 1980 1822 252 220 0 0 chr5 26650167 26650226 -172979924 - MLT2C1 LTR ERVL 0 520 462 290 87 22 0 chr5 26650238 26650284 -172979866 + (GA)n Simple_repeat Simple_repeat 1 47 0 1512 236 20 9 chr5 26650289 26650633 -172979517 - MLT2C1 LTR ERVL -48 349 2 257 330 66 0 chr5 26651800 26651906 -172978244 + ERVL LTR ERVL 1341 1453 -4311 2217 122 9 3 chr5 26652067 26652403 -172977747 + L1PA13 LINE L1 5612 5949 -214 2138 150 22 19 chr5 26652403 26652764 -172977386 - THE1B LTR MaLR 0 364 3 8543 112 4 2 chr5 26652766 26653952 -172976198 - THE1B-int LTR MaLR 0 1580 393 580 129 10 0 chr5 26653952 26654053 -172976097 + L1PA13 LINE L1 6062 6163 0 22 35 0 0 chr5 26654053 26654082 -172976068 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr5 26654387 26654432 -172975718 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr5 26655455 26655491 -172974659 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 26655758 26655782 -172974368 + AT_rich Low_complexity Low_complexity 1 24 0 578 326 126 26 chr5 26657031 26657381 -172972769 + L2 LINE L2 1455 1839 -1475 270 352 30 30 chr5 26657414 26657650 -172972500 + L2 LINE L2 3074 3309 -4 879 319 81 23 chr5 26658274 26658706 -172971444 + LTR16B LTR ERVL 8 464 0 965 320 38 12 chr5 26659018 26659437 -172970713 + ERVL LTR ERVL 839 1268 -3728 24 0 0 0 chr5 26660759 26660783 -172969367 + AT_rich Low_complexity Low_complexity 1 24 0 507 303 17 27 chr5 26660903 26661200 -172968950 - L1ME LINE L1 -552 5610 5317 7775 18 0 5 chr5 26661205 26662727 -172967423 - L1PA3 LINE L1 -4 6151 4634 305 253 160 38 chr5 26662879 26663116 -172967034 + L1M4 LINE L1 4807 5072 -1074 9988 195 32 103 chr5 26663206 26664515 -172965635 + L1PB4 LINE L1 2300 3701 -2445 1515 209 29 3 chr5 26664515 26664822 -172965328 + L1PB4 LINE L1 5825 6139 -17 9988 195 32 103 chr5 26664822 26664922 -172965228 + L1PB4 LINE L1 3701 3807 -2339 1057 130 19 0 chr5 26664922 26665084 -172965066 + AluSg/x SINE Alu 146 310 -2 9988 195 32 103 chr5 26665084 26665497 -172964653 + L1PB4 LINE L1 3807 4248 -1898 317 89 0 0 chr5 26665497 26665542 -172964608 + MADE1 DNA Mariner 1 45 -35 9988 195 32 103 chr5 26665542 26666675 -172963475 + L1PB4 LINE L1 4248 5237 -909 954 226 51 30 chr5 26667209 26667444 -172962706 - MLT1B LTR MaLR 0 390 151 23 0 0 0 chr5 26669569 26669592 -172960558 + AT_rich Low_complexity Low_complexity 1 23 0 360 152 0 0 chr5 26670488 26670554 -172959596 + (TA)n Simple_repeat Simple_repeat 2 67 0 3956 171 30 52 chr5 26670810 26671690 -172958460 - L1MB3 LINE L1 -2 6181 5322 1797 131 7 18 chr5 26673289 26673610 -172956540 + AluSx SINE Alu 4 321 0 790 219 122 15 chr5 26673950 26674176 -172955974 + AluJo SINE Alu 66 312 0 1764 152 18 11 chr5 26674252 26674564 -172955586 - AluSx SINE Alu 0 314 1 408 336 92 37 chr5 26674606 26674933 -172955217 - L1ME LINE L1 -327 5794 5450 17092 115 42 23 chr5 26676263 26678917 -172951233 - Charlie3 DNA MER1_type -4 2706 1 619 298 64 34 chr5 26679040 26679335 -172950815 + LTR16C LTR ERVL 188 491 0 26 82 0 0 chr5 26679898 26679959 -172950191 + AT_rich Low_complexity Low_complexity 1 61 0 2953 96 41 2 chr5 26680046 26680482 -172949668 + MLT2A2 LTR ERVL 1 453 0 26 0 0 0 chr5 26680831 26680857 -172949293 + AT_rich Low_complexity Low_complexity 1 26 0 1756 159 55 0 chr5 26680867 26681156 -172948994 + AluSg SINE Alu 3 307 -3 1397 246 66 0 chr5 26681314 26681663 -172948487 - MER67D LTR ERV1 -138 376 5 3997 191 8 0 chr5 26683692 26684452 -172945698 - L1P LINE L1 -3457 2689 1924 9245 186 62 12 chr5 26684469 26684640 -172945510 + L1P LINE L1 3057 3218 -2928 2098 100 0 7 chr5 26684640 26684949 -172945201 + AluSc SINE Alu 1 307 0 9245 186 62 12 chr5 26684949 26686218 -172943932 + L1P LINE L1 3218 4625 -1521 3559 71 2 0 chr5 26686218 26686670 -172943480 + MLT2A2 LTR ERVL 1 453 0 9245 186 62 12 chr5 26686670 26687199 -172942951 + L1P LINE L1 4625 5126 -1020 481 138 23 0 chr5 26687301 26687388 -172942762 + L1PA13 LINE L1 6075 6163 0 703 230 52 17 chr5 26687975 26688149 -172942001 + MER20 DNA MER1_type 2 181 -38 21 0 0 0 chr5 26691045 26691066 -172939084 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 26691155 26691176 -172938974 + AT_rich Low_complexity Low_complexity 1 21 0 183 387 16 0 chr5 26691237 26691299 -172938851 - L2 LINE L2 -1045 2269 2207 335 143 31 10 chr5 26691765 26691863 -172938287 + (TA)n Simple_repeat Simple_repeat 1 100 0 1238 213 109 30 chr5 26692053 26692391 -172937759 + MLT1A1 LTR MaLR 1 365 0 288 248 26 17 chr5 26693268 26693385 -172936765 + (TA)n Simple_repeat Simple_repeat 1 118 0 227 39 96 0 chr5 26694229 26694281 -172935869 + (TTAGG)n Simple_repeat Simple_repeat 4 60 0 341 221 15 0 chr5 26694841 26694909 -172935241 + Tigger2 DNA MER2_type 1 69 -2649 * 1318 187 142 89 chr5 26694907 26695324 -172934826 + Tigger2 DNA MER2_type 2280 2718 0 27 0 0 0 chr5 26696360 26696387 -172933763 + AT_rich Low_complexity Low_complexity 1 27 0 471 72 0 0 chr5 26697095 26697164 -172932986 + AluS SINE Alu 1 69 -244 1396 193 23 36 chr5 26697220 26697517 -172932633 - MER61A LTR ERV1 0 343 49 1962 70 12 8 chr5 26697517 26697774 -172932376 - AluSq SINE Alu -55 258 1 2229 211 17 6 chr5 26697782 26698251 -172931899 - ERVL LTR ERVL -4525 1239 766 435 62 0 0 chr5 26698296 26698387 -172931763 + Alu SINE Alu 245 335 0 3024 230 22 18 chr5 26698387 26699062 -172931088 + ERVL LTR ERVL 1235 1912 -3852 216 97 0 0 chr5 26699062 26699093 -172931057 + (CA)n Simple_repeat Simple_repeat 2 32 0 291 157 0 0 chr5 26699110 26699161 -172930989 + T-rich Low_complexity Low_complexity 1 51 0 26 69 0 35 chr5 26700002 26700089 -172930061 + AT_rich Low_complexity Low_complexity 1 84 0 258 275 99 11 chr5 26801012 26801103 -172829047 + L2 LINE L2 3172 3270 -2 23 0 0 0 chr5 26801637 26801660 -172828490 + AT_rich Low_complexity Low_complexity 1 23 0 1362 117 0 10 chr5 26802048 26802254 -172827896 + L1PB1 LINE L1 5947 6150 -1 794 173 13 0 chr5 26802532 26802682 -172827468 + MER47A DNA MER2_type 25 176 -190 21 0 0 0 chr5 26803082 26803103 -172827047 + AT_rich Low_complexity Low_complexity 1 21 0 429 285 27 35 chr5 26804012 26804268 -172825882 + L1MEd LINE L1 972 1225 -4894 1249 207 23 4 chr5 26804295 26804556 -172825594 + AluJo SINE Alu 13 278 -34 1870 162 3 0 chr5 26805132 26805422 -172824728 + AluSx SINE Alu 1 291 -21 30 45 0 0 chr5 26805511 26805555 -172824595 + AT_rich Low_complexity Low_complexity 1 44 0 428 282 99 42 chr5 26806193 26806526 -172823624 + MER57A LTR ERV1 78 429 -5 8805 205 21 21 chr5 26807365 26808298 -172821852 - L1P LINE L1 -1637 4509 3578 1659 139 0 0 chr5 26808298 26808535 -172821615 - AluSq SINE Alu -76 237 1 8805 205 21 21 chr5 26808535 26808600 -172821550 - L1P LINE L1 -2568 3578 3515 189 0 0 0 chr5 26808600 26808621 -172821529 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 8805 205 21 21 chr5 26808621 26809661 -172820489 - L1P LINE L1 -2631 3515 2469 5116 154 24 27 chr5 26809657 26811306 -172818844 + L1PA13 LINE L1 4519 6161 -2 * 1248 197 42 32 chr5 26811492 26811801 -172818349 - AluJo SINE Alu 0 312 1 306 271 10 31 chr5 26811853 26811949 -172818201 + MER57A-int LTR ERV1 283 376 -4560 225 328 30 30 chr5 26812662 26812796 -172817354 + MER34C LTR ERV1 294 427 -158 360 237 77 38 chr5 26812901 26813340 -172816810 + MER57A-int LTR ERV1 879 1968 -418 1338 157 11 77 chr5 26813344 26813618 -172816532 - MER50 LTR ERV1 0 734 479 2438 87 0 3 chr5 26813652 26813963 -172816187 + AluSp SINE Alu 1 310 -3 225 0 0 0 chr5 26813963 26813988 -172816162 + (TA)n Simple_repeat Simple_repeat 2 26 0 1874 158 3 3 chr5 26814000 26814285 -172815865 - AluSx SINE Alu -27 285 1 2340 194 14 22 chr5 26814285 26814774 -172815376 - MER50 LTR ERV1 -249 485 1 1813 169 22 33 chr5 26814777 26815145 -172815005 + THE1B LTR MaLR 1 364 0 369 257 38 38 chr5 26815325 26815430 -172814720 + MER34 LTR ERV1 133 237 -305 251 277 31 0 chr5 26815430 26815495 -172814655 + MER34 LTR ERV1 476 542 0 390 219 123 61 chr5 26815566 26816005 -172814145 + MER57A-int LTR ERV1 1978 3575 -2371 1222 248 18 49 chr5 26816012 26816444 -172813706 + MER57A-int LTR ERV1 4629 5592 -1587 322 301 12 35 chr5 26816729 26816902 -172813248 + MER57A LTR ERV1 235 403 0 1850 251 42 21 chr5 26817384 26817914 -172812236 + MER87 LTR ERV1 1 541 0 28 29 0 0 chr5 26820676 26820711 -172809439 + AT_rich Low_complexity Low_complexity 1 35 0 2142 129 73 15 chr5 26821263 26821605 -172808545 + THE1B LTR MaLR 3 364 0 1199 210 98 61 chr5 26821663 26821844 -172808306 - MLT1B LTR MaLR 0 390 217 2270 156 49 10 chr5 26821844 26822255 -172807895 - MSTA LTR MaLR -1 427 1 1199 210 98 61 chr5 26822255 26822449 -172807701 - MLT1B LTR MaLR -173 217 1 392 301 148 11 chr5 26822582 26822758 -172807392 + MLT1E LTR MaLR 219 418 -175 643 239 92 25 chr5 26823173 26823411 -172806739 + L1MCc LINE L1 27 280 -6143 447 250 11 0 chr5 26823450 26823542 -172806608 + MER20 DNA MER1_type 1 93 -126 2425 167 125 18 chr5 26823547 26824051 -172806099 - MER21A LTR ERV1 -6 925 368 1033 179 25 82 chr5 26824050 26824330 -172805820 - MER21A LTR ERV1 -667 264 1 * 1406 254 118 35 chr5 26824355 26824488 -172805662 + MLT1E LTR MaLR 58 179 -414 2026 160 11 26 chr5 26824488 26824869 -172805281 - THE1C LTR MaLR 0 375 1 8998 147 29 34 chr5 26824869 26826457 -172803693 - THE1C-int LTR MaLR 0 1580 1 1786 174 35 32 chr5 26826457 26826831 -172803319 - THE1C LTR MaLR 0 375 1 1406 254 118 35 chr5 26826831 26827138 -172803012 + MLT1E LTR MaLR 179 547 -46 405 0 0 0 chr5 26827138 26827183 -172802967 + (TG)n Simple_repeat Simple_repeat 2 46 0 1406 254 118 35 chr5 26827183 26827231 -172802919 + MLT1E LTR MaLR 547 590 -3 609 205 0 8 chr5 26827237 26827354 -172802796 + MER20 DNA MER1_type 93 208 -11 414 265 8 17 chr5 26827789 26827906 -172802244 + L1MCc LINE L1 773 888 -5535 1344 224 46 40 chr5 26827909 26828235 -172801915 + MLT1D LTR MaLR 21 348 -157 2008 141 84 19 chr5 26828239 26828692 -172801458 + MER1A DNA MER1_type 6 529 0 4436 112 99 11 chr5 26828698 26829415 -172800735 - LTR17 LTR ERV1 0 780 1 559 272 32 6 chr5 26829415 26829573 -172800577 + MLT1D LTR MaLR 342 503 -2 1427 212 0 30 chr5 26829951 26830253 -172799897 - AluJb SINE Alu -19 293 1 327 25 0 0 chr5 26830329 26830369 -172799781 + (CA)n Simple_repeat Simple_repeat 2 41 0 2003 128 0 3 chr5 26830456 26830752 -172799398 + AluSx SINE Alu 3 297 -15 2272 77 0 35 chr5 26830963 26831275 -172798875 + AluY SINE Alu 1 301 -10 223 157 29 0 chr5 26832292 26832362 -172797788 + (TA)n Simple_repeat Simple_repeat 2 73 0 206 219 41 0 chr5 26832375 26832448 -172797702 + (TA)n Simple_repeat Simple_repeat 2 77 0 361 304 106 28 chr5 26832777 26833135 -172797015 + HAL1 LINE L1 758 1143 -1364 518 236 174 17 chr5 26833157 26833335 -172796815 - MER58A DNA MER1_type -15 209 4 21 36 0 0 chr5 26833535 26833563 -172796587 + AT_rich Low_complexity Low_complexity 1 28 0 224 182 0 18 chr5 26833658 26833713 -172796437 + (TA)n Simple_repeat Simple_repeat 1 54 0 708 197 8 0 chr5 26833937 26834064 -172796086 - FLAM_A SINE Alu -5 128 1 22 56 0 0 chr5 26834248 26834284 -172795866 + AT_rich Low_complexity Low_complexity 1 36 0 25 65 0 0 chr5 26834378 26834424 -172795726 + AT_rich Low_complexity Low_complexity 1 46 0 196 366 0 21 chr5 26834894 26834987 -172795163 - MIR3 SINE MIR -42 166 76 246 307 22 66 chr5 26836758 26836895 -172793255 - MLT1J LTR MaLR -190 321 191 234 105 0 0 chr5 26836927 26836965 -172793185 + (CA)n Simple_repeat Simple_repeat 1 38 0 25 65 0 0 chr5 26837492 26837538 -172792612 + AT_rich Low_complexity Low_complexity 1 46 0 372 254 42 17 chr5 26838863 26838981 -172791169 - MIR SINE MIR -29 233 113 31 44 0 0 chr5 26839907 26839952 -172790198 + AT_rich Low_complexity Low_complexity 1 45 0 276 171 49 12 chr5 26840839 26840921 -172789229 + (TA)n Simple_repeat Simple_repeat 2 86 0 242 286 13 13 chr5 26841122 26841199 -172788951 - L1M4 LINE L1 -1999 4147 4071 2342 82 20 0 chr5 26841460 26841765 -172788385 + AluSx SINE Alu 1 311 -1 332 333 58 104 chr5 26842131 26842545 -172787605 - L2 LINE L2 -854 2460 2066 183 391 62 0 chr5 26842638 26842766 -172787384 - L2 LINE L2 -1496 1818 1683 1634 256 37 37 chr5 26843367 26843855 -172786295 + LTR40a LTR ERVL 23 510 -9 22 0 0 0 chr5 26844510 26844532 -172785618 + AT_rich Low_complexity Low_complexity 1 22 0 2189 91 3 7 chr5 26844752 26845048 -172785102 + AluSq SINE Alu 9 303 -10 408 327 50 13 chr5 26846921 26847080 -172783070 - MIR SINE MIR -42 220 56 485 346 66 15 chr5 26848215 26848635 -172781515 + HERVL LTR ERVL 1776 2229 -2818 1475 189 47 153 chr5 26848714 26848751 -172781399 - L1MA9 LINE L1 -38 6274 6235 309 68 0 0 chr5 26848751 26848795 -172781355 + (TA)n Simple_repeat Simple_repeat 2 45 0 180 0 0 0 chr5 26848801 26848821 -172781329 + (CA)n Simple_repeat Simple_repeat 2 21 0 1475 189 47 153 chr5 26848821 26848839 -172781311 - L1MA9 LINE L1 -82 6230 6212 1820 196 130 9 chr5 26848839 26849293 -172780857 + LTR22 LTR ERVK 1 509 0 1475 189 47 153 chr5 26849293 26849926 -172780224 - L1MA9 LINE L1 -100 6212 5652 544 353 33 3 chr5 26850141 26850447 -172779703 + HERVL LTR ERVL 2549 2863 -2901 284 358 52 36 chr5 26850618 26850925 -172779225 + HERVL LTR ERVL 3046 3357 -2297 1084 319 163 6 chr5 26851802 26852519 -172777631 - L2 LINE L2 -913 2401 1572 324 49 0 0 chr5 26853151 26853192 -172776958 + MADE1 DNA Mariner 40 80 0 290 339 39 15 chr5 26853260 26853390 -172776760 - MIR3 SINE MIR -32 176 44 933 236 148 107 chr5 26853445 26854033 -172776117 + MLT1E1 LTR MaLR 6 617 -37 1988 141 7 0 chr5 26855406 26855705 -172774445 - AluSq SINE Alu -7 306 6 356 145 0 92 chr5 26856697 26856773 -172773377 - Charlie3 DNA MER1_type -2641 69 1 1974 116 4 0 chr5 26856806 26857081 -172773069 + AluSx SINE Alu 34 309 -3 423 248 9 0 chr5 26857145 26857258 -172772892 - LTR43 LTR ERV1 -309 293 180 660 271 48 33 chr5 26857509 26857719 -172772431 - MER58A DNA MER1_type -10 214 2 1465 198 13 48 chr5 26859235 26859687 -172770463 + MLT1D LTR MaLR 1 505 0 2264 239 42 16 chr5 26859870 26860418 -172769732 - REP3 LTR ERV 0 562 1 21 0 0 0 chr5 26861426 26861447 -172768703 + AT_rich Low_complexity Low_complexity 1 21 0 2837 191 62 7 chr5 26862036 26862602 -172767548 - Tigger1 DNA MER2_type -1821 597 1 342 264 125 7 chr5 26862603 26862747 -172767403 + L1MA6 LINE L1 3048 3208 -4357 1477 207 41 32 chr5 26862807 26863150 -172767000 - MER4D LTR ERV1 -12 891 546 576 198 0 86 chr5 26863147 26863206 -172766944 - MER4E LTR ERV1 -588 284 222 * 2097 122 0 0 chr5 26863206 26863500 -172766650 + AluSg SINE Alu 1 294 -16 576 198 0 86 chr5 26863500 26863633 -172766517 - MER4E LTR ERV1 -650 222 1 4460 223 45 17 chr5 26863662 26865177 -172764973 + L1MA6 LINE L1 3281 4846 -2719 4530 182 43 24 chr5 26865277 26867072 -172763078 + L1MA6 LINE L1 5704 7539 -180 774 32 0 0 chr5 26867943 26868036 -172762114 + (TA)n Simple_repeat Simple_repeat 1 93 0 34 79 0 0 chr5 26868252 26868328 -172761822 + AT_rich Low_complexity Low_complexity 1 76 0 1982 129 7 0 chr5 26869308 26869602 -172760548 - AluSq SINE Alu -17 296 1 1784 185 48 43 chr5 26869718 26870279 -172759871 + MLT2A2 LTR ERVL 1 554 0 32 43 0 0 chr5 26870336 26870382 -172759768 + AT_rich Low_complexity Low_complexity 1 46 0 289 270 14 0 chr5 26870685 26870759 -172759391 + L1MC4a LINE L1 6642 6716 -1092 305 280 118 40 chr5 26870785 26871571 -172758579 + L1MC5 LINE L1 6780 7470 -492 6012 150 39 34 chr5 26871842 26872242 -172757908 + Tigger3b DNA MER2_type 3 400 -2628 2217 66 0 21 chr5 26872242 26872557 -172757593 - AluY SINE Alu 0 309 1 6012 150 39 34 chr5 26872557 26872861 -172757289 + Tigger3b DNA MER2_type 400 701 -2327 1907 142 3 3 chr5 26872861 26873156 -172756994 + AluSx SINE Alu 1 295 -17 6012 150 39 34 chr5 26873156 26873670 -172756480 + Tigger3b DNA MER2_type 701 1230 -1 198 103 0 0 chr5 26873670 26873699 -172756451 + (GA)n Simple_repeat Simple_repeat 2 30 0 3094 206 16 6 chr5 26874328 26875016 -172755134 + L1M4 LINE L1 5069 5763 -1802 1876 178 40 9 chr5 26875018 26875367 -172754783 + THE1B LTR MaLR 3 362 -2 7653 128 17 0 chr5 26875369 26876502 -172753648 + THE1B-int LTR MaLR 1 1152 -428 3454 196 34 17 chr5 26876534 26877635 -172752515 + L1M2 LINE L1 5968 7086 -645 917 91 68 0 chr5 26877646 26877778 -172752372 - MSTA LTR MaLR -287 141 1 540 278 66 26 chr5 26877788 26878015 -172752135 + MERVL LTR ERVL 931 1166 -3830 414 257 38 9 chr5 26878044 26878149 -172752001 + MERVL LTR ERVL 1219 1326 -3670 295 373 0 0 chr5 26878223 26878341 -172751809 + MERVL LTR ERVL 2979 3096 -2389 1592 199 10 20 chr5 26878424 26878730 -172751420 - AluJb SINE Alu -9 303 1 60 27 0 0 chr5 26878908 26878982 -172751168 + AT_rich Low_complexity Low_complexity 1 74 0 711 283 61 36 chr5 26878982 26879426 -172750724 + L1M4 LINE L1 5792 6252 -1313 362 340 123 8 chr5 26879813 26880048 -172750102 - MLT1I LTR MaLR -147 262 1 891 202 6 0 chr5 26881853 26882021 -172748129 - AluJb SINE Alu -8 304 136 224 220 9 37 chr5 26883392 26883501 -172746649 + (TTAA)n Simple_repeat Simple_repeat 4 109 0 300 281 35 53 chr5 26884129 26884243 -172745907 - MIR SINE MIR 0 262 151 3847 15 0 18 chr5 26884244 26884743 -172745407 + L1PA2 LINE L1 5706 6155 0 495 276 181 26 chr5 26884853 26885085 -172745065 + LTR33 LTR ERVL 4 271 -250 2057 138 3 0 chr5 26885566 26885856 -172744294 - AluSx SINE Alu -21 291 1 281 241 35 46 chr5 26886252 26886339 -172743811 + MER5A DNA MER1_type 102 187 -2 2006 229 26 9 chr5 26886650 26887069 -172743081 + MLT2B3 LTR ERVL 1 426 -128 933 169 18 0 chr5 26887074 26887240 -172742910 + MLT1A1 LTR MaLR 197 365 0 233 260 0 0 chr5 26889042 26889092 -172741058 + CT-rich Low_complexity Low_complexity 1 50 0 279 308 42 25 chr5 26889117 26889237 -172740913 - L1MC4 LINE L1 -364 7678 7557 32 0 0 0 chr5 26889244 26889276 -172740874 + AT_rich Low_complexity Low_complexity 1 32 0 1590 202 39 30 chr5 26889674 26890035 -172740115 - MLT1A1 LTR MaLR 0 365 2 1360 346 114 11 chr5 26890770 26891769 -172738381 + L2 LINE L2 1820 2921 -393 722 265 89 22 chr5 26891897 26892267 -172737883 - LTR37B LTR ERV1 -73 395 1 2320 73 0 0 chr5 26993787 26994118 -172636032 - AluY SINE Alu 0 331 1 717 152 109 0 chr5 26994356 26994521 -172635629 + MSTA LTR MaLR 1 183 -245 7850 215 16 20 chr5 26994641 26996707 -172633443 + L1M1 LINE L1 3502 5564 -2001 278 323 43 59 chr5 26996871 26997057 -172633093 - MER91B DNA MER1_type -5 185 3 1614 211 79 15 chr5 26997069 26997472 -172632678 + MSTB1 LTR MaLR 1 429 -3 29 28 0 0 chr5 26997836 26997872 -172632278 + AT_rich Low_complexity Low_complexity 1 36 0 2119 168 59 18 chr5 26998069 26998573 -172631577 - MLT2A2 LTR ERVL 0 554 1 635 103 211 0 chr5 26999024 26999209 -172630941 - AluSp SINE Alu -2 311 88 812 231 119 130 chr5 26999503 27000244 -172629906 + L1ME1 LINE L1 5404 6043 -123 31 0 0 0 chr5 27002003 27002034 -172628116 + AT_rich Low_complexity Low_complexity 1 31 0 464 370 63 22 chr5 27002230 27002641 -172627509 + LTR16A LTR ERVL 23 450 0 274 296 0 34 chr5 27003177 27003265 -172626885 - MIR SINE MIR -4 258 174 21 0 0 0 chr5 27003825 27003846 -172626304 + AT_rich Low_complexity Low_complexity 1 21 0 1782 153 58 9 chr5 27005385 27005712 -172624438 - MER61A LTR ERV1 0 343 1 30 45 0 0 chr5 27006519 27006563 -172623587 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr5 27007337 27007359 -172622791 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr5 27007876 27007907 -172622243 + AT_rich Low_complexity Low_complexity 1 31 0 1653 87 0 0 chr5 27007924 27008142 -172622008 + AluY SINE Alu 92 309 -2 877 168 5 92 chr5 27008496 27008692 -172621458 + AluJb SINE Alu 1 179 -133 387 0 0 0 chr5 27008700 27008743 -172621407 + (TG)n Simple_repeat Simple_repeat 2 44 0 367 304 20 17 chr5 27008828 27009078 -172621072 + GA-rich Low_complexity Low_complexity 1 250 0 222 230 0 44 chr5 27009101 27009236 -172620914 + GA-rich Low_complexity Low_complexity 1 129 0 380 291 64 64 chr5 27009414 27009648 -172620502 - MLT1J2 LTR MaLR -201 249 16 330 328 16 0 chr5 27009782 27009907 -172620243 - MIR SINE MIR -12 250 124 356 217 26 72 chr5 27011115 27011267 -172618883 - MIR SINE MIR -31 231 87 2963 250 38 46 chr5 27011298 27012372 -172617778 + L1PA12 LINE L1 610 2326 -5258 3583 259 28 26 chr5 27012693 27013205 -172616945 + ERVL LTR ERVL 2419 2935 -2829 3042 80 27 18 chr5 27013205 27013600 -172616550 + MLT2A1 LTR ERVL 1 402 -42 312 70 0 0 chr5 27013600 27013643 -172616507 + (TG)n Simple_repeat Simple_repeat 2 44 0 3042 80 27 18 chr5 27013643 27013687 -172616463 + MLT2A1 LTR ERVL 402 444 0 3583 259 28 26 chr5 27013687 27014163 -172615987 + ERVL LTR ERVL 2935 3409 -2355 908 233 29 40 chr5 27014586 27014861 -172615289 + L1M4 LINE L1 734 1005 -5854 1646 229 51 39 chr5 27014869 27015437 -172614713 + L1M4 LINE L1 4303 4877 -2080 300 300 105 9 chr5 27015913 27016123 -172614027 - L1ME LINE L1 -3168 4397 4168 227 319 11 21 chr5 27017253 27017347 -172612803 - L1ME LINE L1 -5941 1614 1522 701 190 22 49 chr5 27017930 27018114 -172612036 - MER53 DNA DNA 0 189 11 26 30 0 0 chr5 27018427 27018460 -172611690 + AT_rich Low_complexity Low_complexity 1 33 0 182 321 47 19 chr5 27018952 27019058 -172611092 + L2 LINE L2 2929 3037 -276 13016 189 107 19 chr5 27019483 27022395 -172607755 - L1M4 LINE L1 -4382 3183 15 25 31 0 0 chr5 27022471 27022503 -172607647 + AT_rich Low_complexity Low_complexity 1 32 0 1986 116 10 23 chr5 27022511 27022813 -172607337 - AluSp SINE Alu -15 298 1 1023 253 55 62 chr5 27023496 27024432 -172605718 + L1ME LINE L1 1581 4440 -2517 512 297 46 10 chr5 27024424 27024642 -172605508 + L1ME LINE L1 6157 6381 -620 * 426 251 31 9 chr5 27024645 27024790 -172605360 + L1ME LINE L1 6447 6595 -394 1943 145 62 28 chr5 27025461 27025813 -172604337 + THE1B LTR MaLR 1 364 0 2240 84 7 3 chr5 27026014 27026312 -172603838 + AluSp SINE Alu 1 299 -14 4760 172 6 42 chr5 27026427 27028233 -172601917 - L1PA6 LINE L1 0 6154 4409 376 203 0 0 chr5 27028258 27028337 -172601813 + L1M4b LINE L1 5150 5228 -1729 198 277 50 50 chr5 27028543 27028644 -172601506 - MIR SINE MIR -110 152 52 333 0 0 0 chr5 27028786 27028823 -172601327 + (TG)n Simple_repeat Simple_repeat 1 37 0 26 0 0 0 chr5 27028907 27028933 -172601217 + AT_rich Low_complexity Low_complexity 1 26 0 27 39 0 19 chr5 27029047 27029072 -172601078 + AT_rich Low_complexity Low_complexity 1 25 -26 1854 141 7 7 chr5 27029072 27029363 -172600787 - AluSp SINE Alu -22 291 1 27 39 0 19 chr5 27029363 27029389 -172600761 + AT_rich Low_complexity Low_complexity 25 51 0 762 249 30 6 chr5 27029627 27029865 -172600285 + L1ME2 LINE L1 5712 5905 -259 190 373 49 20 chr5 27030219 27030321 -172599829 - L2 LINE L2 -4 3268 3164 22 35 0 0 chr5 27030346 27030375 -172599775 + AT_rich Low_complexity Low_complexity 1 29 0 1649 225 11 3 chr5 27031318 27031678 -172598472 - MLT1A1 LTR MaLR -2 363 1 318 304 87 72 chr5 27032890 27033056 -172597094 + L2 LINE L2 2538 2711 -603 180 0 0 0 chr5 27033056 27033076 -172597074 + (CA)n Simple_repeat Simple_repeat 1 20 0 318 304 87 72 chr5 27033076 27033185 -172596965 + L2 LINE L2 2711 2817 -497 34 24 0 0 chr5 27034411 27034452 -172595698 + AT_rich Low_complexity Low_complexity 1 41 0 7706 212 20 33 chr5 27034548 27037189 -172592961 - L1P5 LINE L1 -660 5491 2966 2501 248 88 3 chr5 27037673 27038423 -172591727 - L1ME1 LINE L1 -23 6143 5330 47 0 0 0 chr5 27038439 27038486 -172591664 + AT_rich Low_complexity Low_complexity 1 47 0 1613 236 54 58 chr5 27038486 27038988 -172591162 - L1ME1 LINE L1 -826 5320 4820 1977 168 31 11 chr5 27038988 27039345 -172590805 + THE1B LTR MaLR 1 364 0 1613 236 54 58 chr5 27039345 27039494 -172590656 - L1ME1 LINE L1 -1326 4820 4672 2584 211 50 13 chr5 27039662 27040277 -172589873 + L1MD2 LINE L1 5396 6033 -326 180 0 0 0 chr5 27041027 27041047 -172589103 + (T)n Simple_repeat Simple_repeat 1 20 0 267 133 0 0 chr5 27042108 27042153 -172587997 + (TG)n Simple_repeat Simple_repeat 1 45 0 963 235 98 15 chr5 27042172 27042490 -172587660 + L1MB7 LINE L1 5831 6174 -10 462 79 0 0 chr5 27043902 27043965 -172586185 + (TA)n Simple_repeat Simple_repeat 1 63 0 1532 132 0 0 chr5 27044063 27044303 -172585847 - AluSq SINE Alu 0 307 68 210 358 132 48 chr5 27046437 27047102 -172583048 + L2 LINE L2 1616 2336 -978 4373 177 18 55 chr5 27048999 27050091 -172580059 - L1MB1 LINE L1 -1 6167 5096 1155 204 11 8 chr5 27050087 27050347 -172579803 + L1 LINE L1 4410 4670 -1476 * 1510 191 54 26 chr5 27050517 27050867 -172579283 - THE1B LTR MaLR -4 360 1 8447 162 22 40 chr5 27050867 27052474 -172577676 - THE1B-int LTR MaLR -1 1579 3 1450 177 75 39 chr5 27052476 27052838 -172577312 - THE1C LTR MaLR 0 375 1 424 224 9 28 chr5 27053218 27053325 -172576825 + AluSp SINE Alu 1 105 -198 292 288 36 9 chr5 27053749 27053860 -172576290 + MLT1J1 LTR MaLR 55 168 -278 1035 236 65 96 chr5 27054807 27055063 -172575087 + MLT2B1 LTR ERVL 3 265 -255 195 42 0 0 chr5 27055063 27055087 -172575063 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1035 236 65 96 chr5 27055087 27055312 -172574838 + MLT2B1 LTR ERVL 265 469 -51 521 15 15 0 chr5 27055312 27055378 -172574772 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 1035 236 65 96 chr5 27055378 27055429 -172574721 + MLT2B1 LTR ERVL 469 520 0 226 267 78 33 chr5 27057163 27057253 -172572897 - MLT1I LTR MaLR -243 166 73 189 0 0 0 chr5 27058756 27058777 -172571373 + (T)n Simple_repeat Simple_repeat 1 21 0 6688 139 14 10 chr5 27059148 27060828 -172569322 - L1MA2 LINE L1 0 6304 4619 1554 171 3 52 chr5 27061920 27062229 -172567921 - AluJo SINE Alu -18 294 1 21 0 0 0 chr5 27062682 27062703 -172567447 + AT_rich Low_complexity Low_complexity 1 21 0 273 57 0 0 chr5 27062713 27062748 -172567402 + (TC)n Simple_repeat Simple_repeat 2 36 0 384 119 0 0 chr5 27062789 27062848 -172567302 + (TA)n Simple_repeat Simple_repeat 1 59 0 2068 135 3 3 chr5 27063388 27063684 -172566466 + AluSx SINE Alu 1 296 -16 337 349 46 46 chr5 27064785 27065003 -172565147 + MIR SINE MIR 45 262 0 263 49 24 0 chr5 27065216 27065257 -172564893 + (TA)n Simple_repeat Simple_repeat 1 42 0 4280 82 15 0 chr5 27065257 27065856 -172564294 - L1PA4 LINE L1 -19 6136 5529 1016 256 43 75 chr5 27066073 27066538 -172563612 + MLT1D LTR MaLR 3 452 -53 25 0 0 0 chr5 27067328 27067353 -172562797 + AT_rich Low_complexity Low_complexity 1 25 0 1829 213 22 25 chr5 27067602 27068049 -172562101 + L1PA13 LINE L1 1615 2060 -4727 1328 175 12 4 chr5 27068046 27068292 -172561858 - THE1C-int LTR MaLR -1330 250 3 * 1704 167 58 25 chr5 27068296 27068655 -172561495 - THE1C LTR MaLR -4 371 1 2417 208 10 4 chr5 27068655 27069170 -172560980 + L1PA13 LINE L1 2546 3063 -3734 4511 104 23 0 chr5 27069173 27069834 -172560316 + L1PA12 LINE L1 5260 5935 -233 1164 153 0 5 chr5 27069890 27070079 -172560071 - L1PA11 LINE L1 -37 6137 5950 561 170 6 132 chr5 27070087 27070147 -172560003 - MIR SINE MIR -92 170 104 2793 6 0 3 chr5 27070147 27070459 -172559691 + AluYa5 SINE Alu 1 311 0 561 170 6 132 chr5 27070459 27070557 -172559593 - MIR SINE MIR -158 104 32 21 57 0 0 chr5 27070627 27070662 -172559488 + AT_rich Low_complexity Low_complexity 1 35 0 1180 243 0 18 chr5 27071655 27071935 -172558215 + MLT1A1 LTR MaLR 80 354 -11 805 85 31 0 chr5 27071953 27072083 -172558067 + (GAAA)n Simple_repeat Simple_repeat 2 135 0 417 339 90 25 chr5 27072151 27072428 -172557722 - L2 LINE L2 -1630 1684 1390 328 162 176 0 chr5 27073039 27073107 -172557043 - MADE1 DNA Mariner 0 80 1 22 35 0 0 chr5 27073113 27073142 -172557008 + AT_rich Low_complexity Low_complexity 1 29 0 2102 112 0 0 chr5 27073189 27073513 -172556637 - AluSq SINE Alu 0 324 1 1805 177 33 30 chr5 27073942 27074304 -172555846 - Tigger2a DNA MER2_type -71 363 1 1196 190 65 74 chr5 27074304 27074640 -172555510 + MLT1B LTR MaLR 58 390 0 1718 139 0 21 chr5 27074872 27075153 -172554997 + AluSc SINE Alu 3 277 -32 360 64 0 0 chr5 27075153 27075200 -172554950 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 2071 112 0 10 chr5 27075243 27075537 -172554613 + AluSx SINE Alu 4 294 -18 465 19 0 0 chr5 27075537 27075591 -172554559 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 669 226 64 29 chr5 27075863 27076067 -172554083 - MLT1D LTR MaLR -2 503 293 5272 48 0 0 chr5 27076279 27076923 -172553227 + L1PA5 LINE L1 5503 6146 -8 21 36 0 0 chr5 27076923 27076951 -172553199 + AT_rich Low_complexity Low_complexity 1 28 0 453 36 0 0 chr5 27077216 27077271 -172552879 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 459 293 7 0 chr5 27077802 27077949 -172552201 - MER110 LTR ERV1 -12 479 332 24 0 0 0 chr5 27077949 27077973 -172552177 + AT_rich Low_complexity Low_complexity 1 24 0 663 311 44 7 chr5 27078059 27078332 -172551818 - Charlie2 DNA MER1_type -2155 627 345 432 230 69 49 chr5 27078356 27078560 -172551590 - LTR37B LTR ERV1 -11 457 250 209 133 0 67 chr5 27078611 27078656 -172551494 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 2279 60 43 7 chr5 27078848 27079148 -172551002 - AluY SINE Alu 0 311 1 304 209 48 19 chr5 27079162 27079267 -172550883 - L1MD3 LINE L1 -8 7987 7880 * 673 273 25 50 chr5 27079265 27079507 -172550643 + L1MD3 LINE L1 6742 6977 -1018 184 273 0 0 chr5 27079838 27079882 -172550268 - L2 LINE L2 -7 3306 3263 23 33 0 0 chr5 27080496 27080526 -172549624 + AT_rich Low_complexity Low_complexity 1 30 0 216 277 107 36 chr5 27080979 27081091 -172549059 - L2 LINE L2 -302 2970 2851 7464 31 0 0 chr5 27081160 27082627 -172547523 - L1PA4 LINE L1 0 6155 4686 8582 22 1 0 chr5 27082627 27083636 -172546514 + L1PA4 LINE L1 3698 4707 -1439 3442 34 0 0 chr5 27084080 27084493 -172545657 + L1PA4 LINE L1 5738 6150 -5 1130 211 0 38 chr5 27085463 27085724 -172544426 - MLT1D LTR MaLR -1 504 254 1376 164 55 8 chr5 27085747 27086003 -172544147 + AluJb SINE Alu 1 268 -44 189 0 0 0 chr5 27086054 27086075 -172544075 + (TAA)n Simple_repeat Simple_repeat 1 21 0 941 242 4 37 chr5 27086075 27086319 -172543831 - MLT1D LTR MaLR -388 238 3 362 306 45 65 chr5 27087129 27087485 -172542665 - L1MC4 LINE L1 0 8042 7694 1668 187 167 8 chr5 27087547 27087906 -172542244 - MSTA LTR MaLR -11 417 2 5313 204 8 20 chr5 27087907 27088975 -172541175 - MSTA-int LTR MaLR 0 1580 526 782 268 93 12 chr5 27088986 27089415 -172540735 + L1ME1 LINE L1 4771 5234 -912 4537 169 72 5 chr5 27089417 27090247 -172539903 + MER4D LTR ERV1 1 886 -17 1314 264 124 60 chr5 27090373 27091172 -172538978 + L1ME1 LINE L1 5312 6161 -5 379 261 49 21 chr5 27091434 27091576 -172538574 + MER4E LTR ERV1 327 472 -307 264 256 12 24 chr5 27091746 27091828 -172538322 + MIR SINE MIR 177 257 -5 450 114 0 0 chr5 27092239 27092309 -172537841 + (CA)n Simple_repeat Simple_repeat 2 71 0 894 202 30 20 chr5 27093178 27093376 -172536774 + MER3 DNA MER1_type 5 204 -5 597 261 96 43 chr5 27093835 27093902 -172536248 + MER110 LTR ERV1 166 228 -263 2355 90 3 0 chr5 27093902 27094201 -172535949 - AluSc SINE Alu -9 300 1 597 261 96 43 chr5 27094201 27094436 -172535714 + MER110 LTR ERV1 228 484 -7 1942 123 97 32 chr5 27095616 27095958 -172534192 - THE1B LTR MaLR 0 364 1 337 276 0 35 chr5 27096038 27096125 -172534025 - L2 LINE L2 -3 3310 3227 472 134 0 0 chr5 27096286 27096353 -172533797 + AluSg/x SINE Alu 217 283 -26 183 24 49 49 chr5 27096357 27096398 -172533752 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 278 344 16 49 chr5 27096931 27097053 -172533097 + L2 LINE L2 3144 3261 -11 1426 218 0 10 chr5 27097106 27097399 -172532751 - AluJo SINE Alu -21 291 2 311 149 0 0 chr5 27097644 27097691 -172532459 - L1MA6 LINE L1 -192 6108 6062 22 70 0 0 chr5 27098566 27098609 -172531541 + AT_rich Low_complexity Low_complexity 1 43 0 260 213 25 12 chr5 27098684 27098764 -172531386 - HAL1b LINE L1 -2 1346 1266 305 174 116 0 chr5 27098935 27099021 -172531129 - L1MB3 LINE L1 -7 6176 6081 23 54 0 0 chr5 27099213 27099250 -172530900 + AT_rich Low_complexity Low_complexity 1 37 0 813 271 28 9 chr5 27099470 27099688 -172530462 - MER58A DNA MER1_type -2 222 1 403 269 215 0 chr5 27099786 27099916 -172530234 - MER63A DNA MER1_type 0 210 53 652 238 21 0 chr5 27100423 27100566 -172529584 + AluJb SINE Alu 164 309 -3 279 350 96 0 chr5 27100943 27101120 -172529030 - LTR33 LTR ERVL -2 519 326 373 336 7 20 chr5 27101217 27101366 -172528784 - LTR33 LTR ERVL -374 147 1 447 204 11 0 chr5 27102475 27102563 -172527587 - MER72 LTR ERV1 -9 713 625 2618 84 24 50 chr5 27102563 27102682 -172527468 + L1PB1 LINE L1 5372 5493 -658 2105 113 0 0 chr5 27102682 27102990 -172527160 + AluY SINE Alu 1 308 0 2618 84 24 50 chr5 27102990 27103286 -172526864 + L1PB1 LINE L1 5493 5777 -374 312 27 0 0 chr5 27103291 27103328 -172526822 + (CA)n Simple_repeat Simple_repeat 2 38 0 271 265 66 0 chr5 27103738 27103904 -172526246 + (TATATG)n Simple_repeat Simple_repeat 4 180 0 202 186 57 0 chr5 27103904 27104044 -172526106 + (TA)n Simple_repeat Simple_repeat 1 148 0 1549 73 0 0 chr5 27104044 27104249 -172525901 + L1PB1 LINE L1 5782 5986 -165 278 68 0 0 chr5 27104250 27104294 -172525856 + L1PB1 LINE L1 6104 6147 -4 25 0 0 0 chr5 27104297 27104322 -172525828 + AT_rich Low_complexity Low_complexity 1 25 0 252 325 76 25 chr5 27104460 27104617 -172525533 - MIR SINE MIR -19 243 79 282 240 31 61 chr5 27104993 27105066 -172525084 + MLT1J LTR MaLR 64 133 -317 2472 123 3 6 chr5 27105066 27105431 -172524719 - THE1B LTR MaLR 0 364 1 282 240 31 61 chr5 27105431 27105455 -172524695 + MLT1J LTR MaLR 133 156 -294 2832 268 82 21 chr5 27105503 27106581 -172523569 + L1MCb LINE L1 1 1143 -4902 2672 248 154 24 chr5 27106583 27106709 -172523441 + L1MD3 LINE L1 5186 4432 -1714 2216 76 13 3 chr5 27106709 27107010 -172523140 + AluY SINE Alu 1 304 -7 2672 248 154 24 chr5 27107010 27108117 -172522033 + L1MD3 LINE L1 4431 5392 -754 2439 202 87 25 chr5 27108112 27108746 -172521404 + L1MC3 LINE L1 7094 7766 -19 * 239 340 102 30 chr5 27108855 27109052 -172521098 + MLT1J2 LTR MaLR 240 450 0 270 207 92 46 chr5 27109228 27109315 -172520835 - L2 LINE L2 -41 3231 3141 1836 86 4 22 chr5 27109585 27109854 -172520296 + AluSg1 SINE Alu 1 264 -45 24 53 0 0 chr5 27110670 27110708 -172519442 + AT_rich Low_complexity Low_complexity 1 38 0 607 299 36 25 chr5 27110837 27111115 -172519035 - L1ME3A LINE L1 -5 6960 6680 263 264 50 8 chr5 27111152 27111273 -172518877 - L1ME3A LINE L1 -590 6375 6250 1258 200 67 41 chr5 27111341 27111679 -172518471 - THE1C LTR MaLR -24 402 1 8855 151 30 36 chr5 27111679 27113266 -172516884 - THE1C-int LTR MaLR -1 1579 3 1641 176 46 30 chr5 27113268 27113637 -172516513 - THE1C LTR MaLR 0 375 1 472 333 41 35 chr5 27113687 27114056 -172516094 - L1ME3A LINE L1 -795 6146 5776 2252 90 0 7 chr5 27114056 27114357 -172515793 - AluY SINE Alu 0 311 13 450 250 0 0 chr5 27114376 27114464 -172515686 - Tigger7 DNA MER2_type 0 2491 2404 2428 216 31 12 chr5 27114466 27114979 -172515171 - Tigger7 DNA MER2_type -1964 523 1 291 300 84 43 chr5 27114979 27115118 -172515032 - L1ME3A LINE L1 -1175 5766 5634 2261 83 0 13 chr5 27115118 27115418 -172514732 - AluY SINE Alu -15 296 1 291 300 84 43 chr5 27115418 27115601 -172514549 - L1ME3A LINE L1 -1307 5634 5431 209 119 24 0 chr5 27115610 27115652 -172514498 + CT-rich Low_complexity Low_complexity 2 44 0 330 26 0 0 chr5 27115652 27115691 -172514459 + (CA)n Simple_repeat Simple_repeat 1 39 0 598 284 124 42 chr5 27115870 27116297 -172513853 - L1ME3A LINE L1 -1731 5210 4819 2060 91 14 0 chr5 27116297 27116593 -172513557 - L1PA13 LINE L1 -19 6144 5845 598 284 124 42 chr5 27116593 27116925 -172513225 - L1ME3A LINE L1 -2122 4819 4389 3256 214 36 37 chr5 27117027 27117919 -172512231 - L1MB5 LINE L1 -8 6166 5276 264 160 0 0 chr5 27117914 27117964 -172512186 - L1ME3A LINE L1 -4996 1947 1898 * 325 317 107 4 chr5 27118058 27118339 -172511811 - L1M4 LINE L1 -3175 2971 2662 180 224 0 86 chr5 27119174 27119232 -172510918 + MIR3 SINE MIR 112 164 -44 480 269 60 60 chr5 27119460 27119743 -172510407 - L1MB5 LINE L1 -1210 4936 4654 301 293 9 9 chr5 27120069 27120185 -172509965 - L1ME3A LINE L1 -6226 197 82 324 48 0 0 chr5 27120725 27120767 -172509383 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 372 298 32 25 chr5 27120846 27121004 -172509146 - MIR SINE MIR -3 259 101 650 249 58 40 chr5 27121045 27121266 -172508884 - MER20 DNA MER1_type 0 219 1 361 245 125 42 chr5 27122720 27122872 -172507278 - L1MC5 LINE L1 -45 7916 7743 1385 203 7 42 chr5 27122872 27123178 -172506972 + AluJb SINE Alu 1 295 -17 361 245 125 42 chr5 27123178 27123217 -172506933 - L1MC5 LINE L1 -218 7743 7709 266 194 14 0 chr5 27123449 27123521 -172506629 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 1653 258 100 21 chr5 27123541 27124267 -172505883 - L1ME2 LINE L1 -120 6324 5542 509 383 17 14 chr5 27124365 27124710 -172505440 + LTR16A LTR ERVL 105 450 0 423 231 103 0 chr5 27124913 27125030 -172505120 + MLT1H1 LTR MaLR 427 555 0 1026 297 93 48 chr5 27125034 27125892 -172504258 - L1ME2 LINE L1 -3006 3420 2602 2781 175 23 17 chr5 27125892 27126413 -172503737 + MER1A DNA MER1_type 1 524 -3 1026 297 93 48 chr5 27126413 27127546 -172502604 - L1ME2 LINE L1 -3824 2602 1171 209 238 63 0 chr5 27127619 27127682 -172502468 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 2164 224 76 39 chr5 27127939 27128496 -172501654 - L1MC2 LINE L1 -195 6429 5894 2069 148 39 20 chr5 27128496 27128853 -172501297 - THE1B LTR MaLR 0 364 1 11339 95 9 2 chr5 27128853 27130422 -172499728 - THE1B-int LTR MaLR 0 1580 1 1815 167 39 25 chr5 27130422 27130781 -172499369 - THE1B LTR MaLR 0 364 1 2164 224 76 39 chr5 27130781 27130932 -172499218 - L1MC2 LINE L1 -729 5895 5693 1478 157 111 98 chr5 27130929 27131408 -172498742 - L1MCa LINE L1 -4944 1482 998 * 1107 220 68 114 chr5 27131416 27131811 -172498339 + MSTD LTR MaLR 20 396 0 3834 187 54 67 chr5 27131811 27132774 -172497376 - L1MCa LINE L1 -5429 997 47 578 239 24 6 chr5 27132795 27132962 -172497188 - L1MC2 LINE L1 -917 5707 5538 584 271 109 57 chr5 27133068 27133452 -172496698 - L1MC2 LINE L1 -5995 431 28 453 347 50 48 chr5 27133518 27134019 -172496131 - L1M4 LINE L1 -1313 4833 4332 233 307 85 20 chr5 27134139 27134292 -172495858 - L1M4 LINE L1 -1954 4192 4030 5991 72 0 0 chr5 27334569 27335390 -172294760 - L1PA7 LINE L1 -2 6152 5328 216 67 0 0 chr5 27335479 27335509 -172294641 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 255 103 0 0 chr5 27336937 27336976 -172293174 + (CA)n Simple_repeat Simple_repeat 2 40 0 285 169 28 45 chr5 27337264 27337442 -172292708 + CT-rich Low_complexity Low_complexity 5 179 0 301 248 88 29 chr5 27337442 27337579 -172292571 - L1M2 LINE L1 -4028 2821 2677 362 308 178 30 chr5 27337585 27337955 -172292195 - HAL1 LINE L1 -1207 1300 876 404 344 73 9 chr5 27339093 27339311 -172290839 + MIR SINE MIR 21 252 -10 371 323 68 68 chr5 27339391 27339639 -172290511 + LTR33 LTR ERVL 12 259 -262 257 305 12 0 chr5 27339714 27339796 -172290354 + LTR33 LTR ERVL 370 452 -69 442 288 23 0 chr5 27340087 27340219 -172289931 - MLT1H LTR MaLR -4 545 411 587 264 82 30 chr5 27340301 27340536 -172289614 - MLT1H LTR MaLR -261 288 1 590 13 53 0 chr5 27340862 27340938 -172289212 - L1PA4 LINE L1 -2 6153 6074 267 393 0 0 chr5 27341225 27341309 -172288841 - L2 LINE L2 -38 3234 3151 6060 173 10 14 chr5 27341590 27343704 -172286446 + L1MA3 LINE L1 4190 6305 0 25 31 0 0 chr5 27343708 27343740 -172286410 + AT_rich Low_complexity Low_complexity 1 32 0 292 109 0 36 chr5 27343832 27343887 -172286263 - L1MA10 LINE L1 -14 6320 6268 1360 217 4 0 chr5 27343887 27344117 -172286033 + MER8 DNA MER2_type 2 232 -7 207 69 0 0 chr5 27345293 27345322 -172284828 + (TG)n Simple_repeat Simple_repeat 1 29 0 225 304 0 0 chr5 27345512 27345591 -172284559 + L1MDa LINE L1 1636 1714 -4826 333 236 158 24 chr5 27345599 27345726 -172284424 - L1MCa LINE L1 -3215 3211 3068 21 36 0 0 chr5 27345838 27345866 -172284284 + AT_rich Low_complexity Low_complexity 1 28 0 600 243 61 43 chr5 27346023 27346484 -172283666 - L1MCa LINE L1 -3667 2759 2250 366 231 40 0 chr5 27346523 27346776 -172283374 + (TA)n Simple_repeat Simple_repeat 1 263 0 328 247 35 0 chr5 27346825 27346910 -172283240 + MLT1B LTR MaLR 256 343 -47 2420 272 66 24 chr5 27346911 27347049 -172283101 + L1M4 LINE L1 3117 3248 -2898 2116 96 3 20 chr5 27347049 27347391 -172282759 + AluSc SINE Alu 1 309 0 2420 272 66 24 chr5 27347391 27347465 -172282685 + L1M4 LINE L1 3248 3317 -2829 1919 203 40 26 chr5 27347465 27347738 -172282412 - MSTB1 LTR MaLR 0 432 149 1531 214 7 0 chr5 27347738 27348032 -172282118 + AluJb SINE Alu 1 296 -16 1919 203 40 26 chr5 27348032 27348181 -172281969 - MSTB1 LTR MaLR -283 149 4 2420 272 66 24 chr5 27348181 27349085 -172281065 + L1M4 LINE L1 3317 4281 -1865 1192 126 16 0 chr5 27349076 27349266 -172280884 + L1P5 LINE L1 5410 5602 -549 * 5758 125 12 3 chr5 27349373 27350268 -172279882 + L1PA10 LINE L1 5262 6164 -4 462 262 90 0 chr5 27351005 27351150 -172279000 - MIR SINE MIR -34 228 71 214 361 92 17 chr5 27352234 27352353 -172277797 + MIR SINE MIR 14 141 -121 400 252 8 53 chr5 27352456 27352587 -172277563 + MIR SINE MIR 135 259 -3 23 86 0 0 chr5 27353248 27353306 -172276844 + AT_rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr5 27353838 27353860 -172276290 + AT_rich Low_complexity Low_complexity 1 22 0 2375 75 7 0 chr5 27354316 27354623 -172275527 - AluY SINE Alu -2 309 1 436 272 40 8 chr5 27357664 27357789 -172272361 + L2 LINE L2 3185 3313 0 1373 243 65 29 chr5 27358167 27358615 -172271535 + MLT1C LTR MaLR 4 467 0 23 33 0 0 chr5 27358630 27358660 -172271490 + AT_rich Low_complexity Low_complexity 1 30 0 1903 161 77 48 chr5 27358784 27359200 -172270950 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr5 27359232 27359254 -172270896 + AT_rich Low_complexity Low_complexity 1 22 0 378 0 0 0 chr5 27359835 27359877 -172270273 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 303 326 65 22 chr5 27360631 27360769 -172269381 + MIR SINE MIR 28 171 -91 1429 108 58 0 chr5 27360771 27361012 -172269138 + L1MA6 LINE L1 6040 6294 -6 454 239 181 32 chr5 27361478 27361633 -172268517 - MER5A DNA MER1_type 0 189 12 1579 162 54 40 chr5 27361971 27362341 -172267809 + THE1C LTR MaLR 1 375 0 1820 152 0 0 chr5 27362406 27362689 -172267461 - AluSq SINE Alu -30 283 1 380 111 0 0 chr5 27362713 27362767 -172267383 + MSTB LTR MaLR 2 55 -371 433 159 0 0 chr5 27362767 27362836 -172267314 - L1P LINE L1 -1152 4994 4926 * 1496 123 36 12 chr5 27362833 27363084 -172267066 + L1PA13 LINE L1 5887 6143 -20 1589 201 64 3 chr5 27363120 27363434 -172266716 + MSTB LTR MaLR 94 426 0 437 162 57 57 chr5 27363491 27363596 -172266554 - MLT1D LTR MaLR 0 505 401 279 0 0 0 chr5 27363738 27363769 -172266381 + (TG)n Simple_repeat Simple_repeat 2 32 0 2573 55 0 0 chr5 27365301 27365609 -172264541 - AluY SINE Alu -2 309 2 1811 146 71 31 chr5 27366120 27366443 -172263707 + MER1B DNA MER1_type 2 337 0 27 29 0 0 chr5 27367016 27367050 -172263100 + AT_rich Low_complexity Low_complexity 1 34 0 1771 295 36 14 chr5 27367084 27367585 -172262565 + MLT1F LTR MaLR 29 540 -2 205 248 18 0 chr5 27367794 27367907 -172262243 + (TA)n Simple_repeat Simple_repeat 2 116 0 222 128 0 0 chr5 27369028 27369067 -172261083 + (TG)n Simple_repeat Simple_repeat 2 40 0 242 384 18 0 chr5 27370274 27370386 -172259764 + MER81 DNA DNA 1 114 0 1468 256 39 18 chr5 27370450 27370938 -172259212 + MLT1D LTR MaLR 4 501 -4 2200 39 0 0 chr5 27371384 27371642 -172258508 + AluY SINE Alu 43 300 -11 685 228 57 24 chr5 27372497 27372708 -172257442 - MER39 LTR ERV1 -41 666 449 222 37 0 0 chr5 27372847 27372874 -172257276 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 814 149 0 0 chr5 27372874 27372988 -172257162 - AluJb SINE Alu -192 120 7 25 31 0 0 chr5 27373562 27373594 -172256556 + AT_rich Low_complexity Low_complexity 1 32 0 1288 170 140 8 chr5 27374578 27374843 -172255307 + AluJb SINE Alu 1 300 -2 247 301 166 5 chr5 27374878 27375071 -172255079 + MER46C DNA MER2_type 94 317 -21 250 340 60 10 chr5 27375227 27375327 -172254823 - MIR SINE MIR -81 181 77 1736 199 17 11 chr5 27376246 27376608 -172253542 - MLT1A1 LTR MaLR 0 365 2 1574 167 0 99 chr5 27376800 27377183 -172252967 - MER7A DNA MER2_type 0 346 4 356 167 26 13 chr5 27377205 27377283 -172252867 + MER67C LTR ERV1 595 673 -37 1156 144 18 52 chr5 27377860 27378089 -172252061 - Tigger2a DNA MER2_type -212 222 2 801 63 9 0 chr5 27378243 27378354 -172251796 + LTR22A LTR ERVK 1 112 -346 655 159 16 16 chr5 27378355 27378481 -172251669 - HERVK22 LTR ERVK -6631 206 81 3280 88 11 4 chr5 27378545 27378999 -172251151 - LTR22A LTR ERVK -1 457 1 219 261 0 0 chr5 27379134 27379180 -172250970 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 323 313 35 55 chr5 27379748 27379949 -172250201 - MIR3 SINE MIR 0 208 12 2042 115 4 4 chr5 27380020 27380328 -172249822 - AluSx SINE Alu 0 312 5 1032 225 0 0 chr5 27380620 27380833 -172249317 - L1PB4 LINE L1 -3 6153 5941 422 330 63 42 chr5 27381238 27381523 -172248627 - L2 LINE L2 -2 3311 3021 21 0 0 0 chr5 27381793 27381814 -172248336 + AT_rich Low_complexity Low_complexity 1 21 0 237 349 69 39 chr5 27381958 27382290 -172247860 - L2 LINE L2 -707 2607 2266 2568 53 0 0 chr5 27382293 27382597 -172247553 - AluY SINE Alu -7 304 1 186 373 45 0 chr5 27383229 27383296 -172246854 - L2 LINE L2 -50 3222 3153 588 314 106 16 chr5 27383492 27383795 -172246355 + L2 LINE L2 1299 1628 -1686 183 100 0 0 chr5 27383795 27383825 -172246325 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 1964 61 389 162 chr5 27383826 27384400 -172245750 + LTR12 LTR ERV1 8 711 -3 207 100 0 0 chr5 27384402 27384432 -172245718 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2046 127 7 3 chr5 27384433 27384732 -172245418 - AluSg SINE Alu -8 302 3 485 333 102 19 chr5 27384766 27385081 -172245069 + L2 LINE L2 1642 1982 -1332 495 313 142 16 chr5 27385082 27385398 -172244752 + L2 LINE L2 2185 2540 -774 261 0 0 0 chr5 27385401 27385430 -172244720 + (T)n Simple_repeat Simple_repeat 1 29 0 635 270 11 16 chr5 27385576 27385765 -172244385 - MLT1A2 LTR MaLR 0 374 187 315 0 0 0 chr5 27385768 27385803 -172244347 + (TG)n Simple_repeat Simple_repeat 2 36 0 860 199 42 0 chr5 27385812 27385978 -172244172 - MSTB LTR MaLR -15 411 239 242 220 0 0 chr5 27385984 27386034 -172244116 - MSTB-int LTR MaLR -188 1463 1414 1846 145 49 20 chr5 27386034 27386378 -172243772 + L1PB3 LINE L1 5799 6152 -2 6562 218 46 10 chr5 27386432 27387795 -172242355 - MSTB-int LTR MaLR -234 1417 6 1847 237 21 5 chr5 27387806 27388224 -172241926 - MSTB LTR MaLR 0 426 2 228 122 0 0 chr5 27388224 27388265 -172241885 + (TC)n Simple_repeat Simple_repeat 2 42 0 564 236 7 42 chr5 27388346 27388490 -172241660 - MLT1A2 LTR MaLR -226 139 1 190 333 39 13 chr5 27388608 27388686 -172241464 - L2 LINE L2 -12 3301 3222 198 0 0 0 chr5 27389324 27389346 -172240804 + (T)n Simple_repeat Simple_repeat 1 22 0 221 187 55 22 chr5 27389943 27390034 -172240116 + (TA)n Simple_repeat Simple_repeat 2 95 0 374 339 63 0 chr5 27391821 27392010 -172238140 + MLT1J2 LTR MaLR 12 212 -238 240 254 0 0 chr5 27392022 27392081 -172238069 + CT-rich Low_complexity Low_complexity 2 60 0 647 282 87 21 chr5 27393772 27394013 -172236137 + MIR SINE MIR 5 261 -1 246 270 67 11 chr5 27394068 27394157 -172235993 + L2 LINE L2 3220 3313 0 338 288 153 23 chr5 27394285 27394462 -172235688 + MIR SINE MIR 41 240 -22 269 185 7 40 chr5 27395226 27395377 -172234773 + (TA)n Simple_repeat Simple_repeat 2 147 0 236 325 60 0 chr5 27395400 27395483 -172234667 - L2 LINE L2 -44 3228 3141 2309 144 38 10 chr5 27395844 27396261 -172233889 + L1PB2 LINE L1 5721 6149 -2 2847 213 92 17 chr5 27396268 27396860 -172233290 + L1MC2 LINE L1 4309 4855 -1489 240 35 0 0 chr5 27396860 27396889 -172233261 + (CA)n Simple_repeat Simple_repeat 1 29 0 2847 213 92 17 chr5 27396889 27398179 -172231971 + L1MC2 LINE L1 4855 6335 -9 750 306 128 18 chr5 27398343 27398914 -172231236 + L1ME2 LINE L1 5316 5949 -215 228 111 0 0 chr5 27399452 27399488 -172230662 + (TA)n Simple_repeat Simple_repeat 1 36 0 1757 135 6 45 chr5 27399880 27400191 -172229959 + AluSx SINE Alu 1 299 -13 225 185 0 74 chr5 27401003 27401057 -172229093 + L2 LINE L2 3264 3313 0 1239 131 78 45 chr5 27401789 27402033 -172228117 - MSTC LTR MaLR -12 416 165 2538 101 14 8 chr5 27402036 27402394 -172227756 - THE1C LTR MaLR -15 360 1 785 193 33 0 chr5 27402394 27402540 -172227610 - MSTC LTR MaLR -277 151 1 2191 102 3 3 chr5 27403247 27403542 -172226608 + AluSp SINE Alu 5 299 -14 197 337 41 0 chr5 27403830 27403928 -172226222 + MIR SINE MIR 148 249 -13 21 71 0 0 chr5 27404256 27404298 -172225852 + AT_rich Low_complexity Low_complexity 1 42 0 1573 164 18 11 chr5 27404397 27404700 -172225450 + AluJo SINE Alu 16 312 0 30 45 0 0 chr5 27410615 27410659 -172219491 + AT_rich Low_complexity Low_complexity 1 44 0 2181 110 3 3 chr5 27411031 27411331 -172218819 + AluSg SINE Alu 7 306 -4 930 85 0 248 chr5 27411914 27411959 -172218191 + MSTC LTR MaLR 1 55 -373 495 0 0 0 chr5 27411959 27412014 -172218136 + (TTTTA)n Simple_repeat Simple_repeat 5 59 0 1771 107 69 4 chr5 27412014 27412276 -172217874 - AluSq SINE Alu -32 281 3 930 85 0 248 chr5 27412276 27412352 -172217798 + MSTC LTR MaLR 54 12 -416 2257 70 0 64 chr5 27412352 27412681 -172217469 + AluY SINE Alu 4 311 0 930 85 0 248 chr5 27412681 27412851 -172217299 + MSTC LTR MaLR 11 221 -207 189 0 0 0 chr5 27412918 27412939 -172217211 + (A)n Simple_repeat Simple_repeat 1 21 0 465 303 263 19 chr5 27413456 27413942 -172216208 + L2 LINE L2 2152 2756 -558 207 379 30 23 chr5 27414006 27414138 -172216012 + L2 LINE L2 2768 2900 -414 2432 63 0 0 chr5 27414401 27414700 -172215450 - AluY SINE Alu -12 299 1 302 122 51 31 chr5 27414878 27414976 -172215174 + (TA)n Simple_repeat Simple_repeat 2 101 0 25 0 0 0 chr5 27415523 27415548 -172214602 + AT_rich Low_complexity Low_complexity 1 25 0 532 338 101 0 chr5 27418283 27418511 -172211639 + MIR SINE MIR 6 256 -6 1646 218 48 10 chr5 27418829 27419224 -172210926 - LTR52 LTR ERVL -9 412 3 29 47 0 0 chr5 27419561 27419604 -172210546 + AT_rich Low_complexity Low_complexity 1 43 0 535 261 62 29 chr5 27420613 27420854 -172209296 + HAL1 LINE L1 1778 2026 -481 21 0 0 0 chr5 27420903 27420924 -172209226 + AT_rich Low_complexity Low_complexity 1 21 0 2091 131 26 0 chr5 27421332 27421637 -172208513 - AluSq SINE Alu 0 313 1 1602 156 7 41 chr5 27422242 27422572 -172207578 - AluJo SINE Alu 0 320 1 1559 336 84 37 chr5 27422657 27423939 -172206211 - L2 LINE L2 -7 3306 1978 215 260 10 21 chr5 27424210 27424306 -172205844 + (TTTAA)n Simple_repeat Simple_repeat 3 97 0 203 282 107 61 chr5 27425634 27425765 -172204385 - L3 LINE CR1 -227 1350 1214 22 0 0 0 chr5 27425904 27425926 -172204224 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr5 27426175 27426209 -172203941 + AT_rich Low_complexity Low_complexity 1 34 0 28 79 0 0 chr5 27426471 27426534 -172203616 + AT_rich Low_complexity Low_complexity 1 63 0 285 250 25 0 chr5 27427927 27428007 -172202143 + (TA)n Simple_repeat Simple_repeat 2 83 0 181 327 60 60 chr5 27428161 27428311 -172201839 + L2 LINE L2 3016 3165 -107 486 0 0 0 chr5 27428912 27428966 -172201184 + (TA)n Simple_repeat Simple_repeat 1 54 0 27 0 0 0 chr5 27429091 27429118 -172201032 + AT_rich Low_complexity Low_complexity 1 27 0 528 244 159 20 chr5 27429280 27429481 -172200669 + Charlie4 DNA MER1_type 3 231 -1730 242 282 51 8 chr5 27429573 27429690 -172200460 + Charlie4 DNA MER1_type 1840 1961 0 21 57 0 0 chr5 27430830 27430865 -172199285 + AT_rich Low_complexity Low_complexity 1 35 0 233 316 238 6 chr5 27431044 27431212 -172198938 + MIR SINE MIR 28 234 -28 198 0 0 0 chr5 27431964 27431986 -172198164 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 39 22 0 0 chr5 27432399 27432445 -172197705 + AT_rich Low_complexity Low_complexity 1 46 0 42 48 0 0 chr5 27433320 27433383 -172196767 + AT_rich Low_complexity Low_complexity 1 63 0 338 327 138 52 chr5 27433388 27433467 -172196683 + L1MC4a LINE L1 5264 5335 -2473 1707 231 26 22 chr5 27433467 27433930 -172196220 + MLT1C LTR MaLR 3 467 0 338 327 138 52 chr5 27433930 27434388 -172195762 + L1MC4a LINE L1 5335 5847 -1961 749 238 40 113 chr5 27434520 27434920 -172195230 - MLT1A2 LTR MaLR 0 374 4 1535 260 58 64 chr5 27437071 27437269 -172192881 + MLT1E2 LTR MaLR 1 199 -427 2221 89 4 0 chr5 27437269 27437550 -172192600 + AluSx SINE Alu 3 284 -28 1179 93 7 0 chr5 27437550 27437573 -172192577 + AluSq SINE Alu 3 307 0 1535 260 58 64 chr5 27437573 27438009 -172192141 + MLT1E2 LTR MaLR 199 626 0 459 294 157 0 chr5 27438152 27438305 -172191845 - MER5A DNA MER1_type -1 188 12 2297 80 0 10 chr5 27438601 27438903 -172191247 - AluY SINE Alu -12 299 1 239 0 0 31 chr5 27439551 27439583 -172190567 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 16706 103 42 75 chr5 27442536 27445841 -172184309 + L1PA8 LINE L1 2895 6170 -2 948 279 64 29 chr5 27445841 27446389 -172183761 + L1M4 LINE L1 3168 3734 -2412 395 309 86 0 chr5 27448059 27448198 -172181952 + MIR SINE MIR 18 168 -94 21 57 0 0 chr5 27450160 27450195 -172179955 + AT_rich Low_complexity Low_complexity 1 35 0 222 218 69 92 chr5 27450418 27450505 -172179645 - MIR SINE MIR -10 252 168 310 316 155 26 chr5 27450634 27450789 -172179361 + MIR SINE MIR 12 186 -76 183 333 0 25 chr5 27451491 27451572 -172178578 - MIR SINE MIR -169 93 15 21 57 0 0 chr5 27452593 27452628 -172177522 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 27453240 27453261 -172176889 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 27453522 27453560 -172176590 + AT_rich Low_complexity Low_complexity 1 38 0 2319 58 7 7 chr5 27454945 27455240 -172174910 - AluY SINE Alu -16 295 1 35 78 0 0 chr5 27455326 27455403 -172174747 + AT_rich Low_complexity Low_complexity 1 77 0 1038 8 0 0 chr5 27455494 27455613 -172174537 - L1PA2 LINE L1 -1 6154 6036 25 0 0 0 chr5 27455895 27455920 -172174230 + AT_rich Low_complexity Low_complexity 1 25 0 407 19 19 0 chr5 27456170 27456222 -172173928 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 267 393 0 0 chr5 27456991 27457075 -172173075 + L2 LINE L2 3151 3234 -38 230 345 11 0 chr5 27457081 27457168 -172172982 - MIR SINE MIR -2 260 173 195 170 0 0 chr5 27458454 27458501 -172171649 + (TA)n Simple_repeat Simple_repeat 2 48 0 1982 134 36 38 chr5 27458723 27459088 -172171062 + THE1B LTR MaLR 1 364 0 209 254 28 42 chr5 27459139 27459210 -172170940 + MIR3 SINE MIR 91 160 -48 21 36 0 0 chr5 27459236 27459264 -172170886 + AT_rich Low_complexity Low_complexity 1 28 0 324 0 0 0 chr5 27459714 27459750 -172170400 + (TG)n Simple_repeat Simple_repeat 1 36 0 233 356 45 60 chr5 27461000 27461182 -172168968 + MIR SINE MIR 2 191 -54 1319 153 142 24 chr5 27461363 27461617 -172168533 + THE1B LTR MaLR 81 364 0 354 167 15 0 chr5 27461767 27461833 -172168317 + MSTD LTR MaLR 2 68 -360 575 286 6 40 chr5 27461865 27462040 -172168110 + MSTD LTR MaLR 227 395 -1 27 73 0 0 chr5 27462259 27462314 -172167836 + AT_rich Low_complexity Low_complexity 1 55 0 2103 103 10 0 chr5 27462584 27462874 -172167276 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr5 27463804 27463828 -172166322 + AT_rich Low_complexity Low_complexity 1 24 0 3301 213 23 26 chr5 27464052 27465152 -172164998 + L1MB5 LINE L1 4979 6076 -98 1494 152 110 26 chr5 27466380 27466689 -172163461 - MER44D DNA MER2_type -4 605 1 606 129 34 48 chr5 27467106 27467253 -172162897 - L1MA7 LINE L1 -8 6283 6139 536 224 37 0 chr5 27467272 27467406 -172162744 + L1MA7 LINE L1 6005 6143 -148 208 385 73 6 chr5 27467634 27467813 -172162337 + L2 LINE L2 2522 2712 -602 24 77 0 0 chr5 27467959 27468011 -172162139 + AT_rich Low_complexity Low_complexity 1 52 0 193 333 231 6 chr5 27468270 27468426 -172161724 + L2 LINE L2 3031 3221 -92 1099 260 123 31 chr5 27468557 27468938 -172161212 + MLT2B1 LTR ERVL 103 518 -2 16938 156 47 56 chr5 27468983 27471072 -172159078 + L1M1 LINE L1 16 2202 -5363 2970 168 33 9 chr5 27471072 27471644 -172158506 + LTR60 LTR ERV1 1 586 0 16938 156 47 56 chr5 27471644 27473062 -172157088 + L1M1 LINE L1 2202 3632 -3933 3785 233 39 22 chr5 27473096 27474252 -172155898 + L1M1 LINE L1 3608 4782 -2783 295 121 38 17 chr5 27474354 27474431 -172155719 - L1PA8 LINE L1 -188 5966 5884 1919 146 0 0 chr5 27474819 27475130 -172155020 + AluSx SINE Alu 1 311 0 265 321 57 0 chr5 27475673 27475779 -172154371 + LTR16A1 LTR ERVL 174 285 -172 1516 198 29 0 chr5 27476472 27476627 -172153523 - AluJb SINE Alu -26 286 118 221 0 0 33 chr5 27476627 27476657 -172153493 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1516 198 29 0 chr5 27476657 27476779 -172153371 - AluJb SINE Alu -194 118 1 301 322 11 11 chr5 27477085 27477172 -172152978 - L2 LINE L2 -36 3277 3191 1562 183 0 41 chr5 27477234 27477529 -172152621 - AluJo SINE Alu -20 292 10 2036 118 0 0 chr5 27477809 27478088 -172152062 - AluSx SINE Alu -10 302 24 243 309 11 0 chr5 27478889 27478983 -172151167 - L1MC/D LINE L1 -2339 5469 5375 254 125 21 0 chr5 27479436 27479484 -172150666 + (TA)n Simple_repeat Simple_repeat 2 50 0 207 218 69 20 chr5 27479604 27479705 -172150445 + (TTAAA)n Simple_repeat Simple_repeat 5 110 0 851 216 54 62 chr5 27481935 27482176 -172147974 + MER8 DNA MER2_type 1 239 0 2319 89 0 0 chr5 27482392 27482683 -172147467 - AluSg SINE Alu -14 296 6 1930 151 10 10 chr5 27483489 27483800 -172146350 + AluSx SINE Alu 1 311 -1 1571 137 64 6 chr5 27484192 27484341 -172145809 - L1MA9 LINE L1 0 6312 6173 222 37 0 0 chr5 27484341 27484368 -172145782 + (TG)n Simple_repeat Simple_repeat 2 28 0 1571 137 64 6 chr5 27484368 27484531 -172145619 - L1MA9 LINE L1 -139 6173 5982 362 367 29 61 chr5 27485327 27485673 -172144477 + L1ME LINE L1 332 666 -5539 235 353 26 0 chr5 27485774 27485890 -172144260 + L1MC4 LINE L1 7907 8025 -17 1302 165 34 8 chr5 27485968 27486204 -172143946 - AluJb SINE Alu -8 304 63 299 186 43 0 chr5 27486276 27486346 -172143804 - L1MC/D LINE L1 -764 5400 5328 329 295 20 58 chr5 27486467 27486762 -172143388 - L1MC4 LINE L1 -169 7873 7590 293 309 66 7 chr5 27486764 27486916 -172143234 + L1M4 LINE L1 4622 4782 -1364 234 220 0 0 chr5 27486976 27487035 -172143115 + (TA)n Simple_repeat Simple_repeat 2 60 0 1838 295 73 40 chr5 27487459 27489627 -172140523 + L1ME LINE L1 591 2791 -3424 190 382 66 0 chr5 27490391 27490467 -172139683 + L2 LINE L2 3169 3249 -23 243 313 30 30 chr5 27490584 27490715 -172139435 + L1ME LINE L1 5602 5732 -458 1895 174 3 9 chr5 27490726 27491071 -172139079 + MER2 DNA MER2_type 2 344 0 24 32 0 0 chr5 27491175 27491206 -172138944 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr5 27491469 27491490 -172138660 + (CAT)n Simple_repeat Simple_repeat 1 21 0 201 121 0 0 chr5 27491638 27491671 -172138479 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 1938 118 20 13 chr5 27492203 27492509 -172137641 - AluSg SINE Alu 0 310 3 180 0 0 0 chr5 27492626 27492646 -172137504 + (CAA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr5 27494992 27495013 -172135137 + AT_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr5 27496615 27496647 -172133503 + (T)n Simple_repeat Simple_repeat 1 32 0 410 101 14 0 chr5 27499018 27499087 -172131063 + (TC)n Simple_repeat Simple_repeat 1 70 0 279 355 0 0 chr5 27499481 27499574 -172130576 - MIR SINE MIR -121 141 49 258 160 0 0 chr5 27499655 27499705 -172130445 + (CAT)n Simple_repeat Simple_repeat 1 50 0 411 294 123 42 chr5 27500446 27500755 -172129395 - L2 LINE L2 -439 2875 2542 381 325 58 31 chr5 27500984 27501175 -172128975 + LTR16A1 LTR ERVL 258 453 -4 310 276 11 0 chr5 27501496 27501583 -172128567 + (TA)n Simple_repeat Simple_repeat 2 89 0 1386 182 0 0 chr5 27501583 27501814 -172128336 - MER1B DNA MER1_type -66 231 1 1414 201 33 16 chr5 27501814 27502118 -172128032 + MLT1A1 LTR MaLR 55 363 -2 2816 230 25 32 chr5 27502118 27502341 -172127809 + MLT1A1-int LTR MaLR 5 228 -1143 2244 88 3 16 chr5 27502341 27502646 -172127504 + AluSp SINE Alu 1 301 -12 2816 230 25 32 chr5 27502646 27503161 -172126989 + MLT1A1-int LTR MaLR 228 752 -619 222 37 0 0 chr5 27503225 27503252 -172126898 + (A)n Simple_repeat Simple_repeat 1 27 0 2045 236 36 25 chr5 27503377 27503852 -172126298 + MLT1A1-int LTR MaLR 1255 1734 -1 1247 237 12 96 chr5 27503856 27504055 -172126095 + MLT1A2 LTR MaLR 4 153 -221 302 0 26 0 chr5 27504055 27504093 -172126057 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1247 237 12 96 chr5 27504093 27504298 -172125852 + MLT1A2 LTR MaLR 153 374 0 25 31 0 0 chr5 27505848 27505880 -172124270 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5 27506142 27506171 -172123979 + AT_rich Low_complexity Low_complexity 1 29 0 205 226 19 0 chr5 27506176 27506229 -172123921 + (TA)n Simple_repeat Simple_repeat 1 54 0 246 156 0 0 chr5 27506252 27506316 -172123834 + (TA)n Simple_repeat Simple_repeat 2 65 0 195 235 0 0 chr5 27506776 27506827 -172123323 + (TG)n Simple_repeat Simple_repeat 2 52 0 2112 118 3 0 chr5 27507233 27507521 -172122629 - AluSc SINE Alu -17 292 4 404 102 17 0 chr5 27507751 27507810 -172122340 - L1P LINE L1 -900 5246 5187 3694 43 2 4 chr5 27507810 27508269 -172121881 + L1PA4 LINE L1 5695 6155 0 21 36 0 0 chr5 27508415 27508443 -172121707 + AT_rich Low_complexity Low_complexity 1 28 0 2154 113 20 0 chr5 27508490 27508791 -172121359 + AluSc SINE Alu 1 307 -2 184 270 226 0 chr5 27508874 27508989 -172121161 - L2 LINE L2 -62 3251 3111 8541 199 37 110 chr5 27508993 27511369 -172118781 + L1MC3 LINE L1 4728 7278 -507 297 0 0 0 chr5 27511369 27511402 -172118748 + (TC)n Simple_repeat Simple_repeat 1 33 0 8541 199 37 110 chr5 27511402 27511510 -172118640 + L1MC3 LINE L1 7278 7392 -393 7249 45 3 0 chr5 27511510 27512456 -172117694 + L1PA5 LINE L1 5206 6154 0 8541 199 37 110 chr5 27512456 27512532 -172117618 + L1MC3 LINE L1 7392 7472 -313 1137 217 4 0 chr5 27512532 27512767 -172117383 - MER46A DNA MER2_type 0 236 1 8541 199 37 110 chr5 27512767 27513120 -172117030 + L1MC3 LINE L1 7472 7353 -432 208 0 62 0 chr5 27513120 27513152 -172116998 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8541 199 37 110 chr5 27513152 27513537 -172116613 + L1MC3 LINE L1 7352 7764 -21 293 327 65 93 chr5 27513549 27514086 -172116064 - L2 LINE L2 -188 3125 2606 417 264 37 117 chr5 27514122 27514448 -172115702 - L2 LINE L2 -830 2484 2185 5472 128 5 3 chr5 27514800 27515703 -172114447 + L1PA14 LINE L1 5047 6152 -9 30 0 0 0 chr5 27515703 27515733 -172114417 + AT_rich Low_complexity Low_complexity 1 30 0 737 318 135 21 chr5 27515817 27516254 -172113896 + LTR33 LTR ERVL 31 517 -4 193 255 245 10 chr5 27516338 27516436 -172113714 - L2 LINE L2 -2 3311 3191 931 253 145 22 chr5 27517053 27517468 -172112682 - Charlie4a DNA MER1_type -7 501 36 1808 154 21 0 chr5 27517740 27518025 -172112125 + AluSx SINE Alu 3 293 -19 311 305 91 19 chr5 27518427 27518581 -172111569 - MLT1I LTR MaLR -236 173 9 1085 191 23 27 chr5 27519598 27519854 -172110296 - L1MB1 LINE L1 -18 6150 5896 587 312 67 40 chr5 27520336 27520708 -172109442 - MLT1I LTR MaLR -22 387 6 1303 219 113 24 chr5 27520733 27521158 -172108992 + MLT1C LTR MaLR 3 465 -2 328 206 15 145 chr5 27521332 27521463 -172108687 + MIR SINE MIR 64 177 -85 703 293 10 0 chr5 27521571 27521779 -172108371 + MER2 DNA MER2_type 1 210 -135 25 0 0 0 chr5 27521803 27521828 -172108322 + AT_rich Low_complexity Low_complexity 1 25 0 223 216 137 0 chr5 27522514 27522565 -172107585 - MIR SINE MIR -4 258 201 1283 208 67 31 chr5 27522585 27522945 -172107205 + MER93b LTR ERV1 1 373 0 425 305 123 48 chr5 27522949 27523283 -172106867 + MLT1I LTR MaLR 18 376 -33 692 283 178 28 chr5 27523495 27523962 -172106188 + MER90 LTR ERV1 78 614 0 257 221 0 35 chr5 27524124 27524210 -172105940 + (TA)n Simple_repeat Simple_repeat 1 83 0 21 0 0 0 chr5 27524404 27524425 -172105725 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 27525139 27525168 -172104982 + AT_rich Low_complexity Low_complexity 1 29 0 288 306 64 31 chr5 27526856 27527096 -172103054 + MER20B DNA MER1_type 2 270 -513 205 171 0 0 chr5 27527100 27527141 -172103009 + T-rich Low_complexity Low_complexity 4 44 0 273 299 78 59 chr5 27527196 27527400 -172102750 + MER20B DNA MER1_type 309 516 -267 203 254 0 0 chr5 27527834 27527889 -172102261 + (CATATA)n Simple_repeat Simple_repeat 4 58 0 25 31 0 0 chr5 27529581 27529613 -172100537 + AT_rich Low_complexity Low_complexity 1 32 0 30 27 0 0 chr5 27529722 27529759 -172100391 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 27530114 27530142 -172100008 + AT_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr5 27530245 27530272 -172099878 + (CA)n Simple_repeat Simple_repeat 1 27 0 279 317 12 0 chr5 27532559 27532641 -172097509 - MIR3 SINE MIR -25 183 101 1987 130 0 0 chr5 27533294 27533614 -172096536 + AluSx SINE Alu 1 320 0 195 318 229 18 chr5 27534151 27534321 -172095829 - MIR SINE MIR -49 213 8 416 365 131 9 chr5 27535872 27536209 -172093941 + L2 LINE L2 2929 3306 -7 30 59 0 0 chr5 27536220 27536271 -172093879 + AT_rich Low_complexity Low_complexity 1 51 0 322 387 7 0 chr5 27537014 27537164 -172092986 - MIR SINE MIR -79 183 33 190 323 50 30 chr5 27537226 27537325 -172092825 - MIR SINE MIR -65 143 43 1861 155 7 3 chr5 27537621 27537917 -172092233 + AluSx SINE Alu 1 297 -15 205 296 87 56 chr5 27538849 27539045 -172091105 + L3 LINE CR1 1184 1385 -192 196 306 41 0 chr5 27539103 27539152 -172090998 + L2 LINE L2 3242 3292 -21 24 32 0 0 chr5 27541769 27541800 -172088350 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr5 27541902 27541934 -172088216 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 27542415 27542437 -172087713 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr5 27542794 27542822 -172087328 + AT_rich Low_complexity Low_complexity 1 28 0 324 70 0 0 chr5 27542990 27543033 -172087117 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr5 27543701 27543722 -172086428 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 27544068 27544092 -172086058 + AT_rich Low_complexity Low_complexity 1 24 0 186 43 0 0 chr5 27544104 27544127 -172086023 + (CA)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr5 27544481 27544509 -172085641 + AT_rich Low_complexity Low_complexity 1 28 0 363 72 29 14 chr5 27544546 27544615 -172085535 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 213 39 0 0 chr5 27544690 27544716 -172085434 + (TA)n Simple_repeat Simple_repeat 2 27 0 489 47 0 0 chr5 27545198 27545262 -172084888 + (TG)n Simple_repeat Simple_repeat 2 65 0 21 0 0 0 chr5 27545572 27545593 -172084557 + AT_rich Low_complexity Low_complexity 1 21 0 575 317 65 93 chr5 27551058 27551641 -172078509 + L2 LINE L2 240 806 -2508 22 0 0 0 chr5 27552246 27552268 -172077882 + AT_rich Low_complexity Low_complexity 1 22 0 189 147 0 0 chr5 27552826 27552860 -172077290 + (TAA)n Simple_repeat Simple_repeat 1 34 0 342 356 113 9 chr5 27552867 27553089 -172077061 - MIR SINE MIR -13 249 5 26 30 0 0 chr5 27553644 27553677 -172076473 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr5 27554332 27554364 -172075786 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 27554502 27554524 -172075626 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 27555145 27555166 -172074984 + AT_rich Low_complexity Low_complexity 1 21 0 2281 39 0 1 chr5 27556337 27556644 -172073506 - L1M LINE L1 -758 5388 5101 5268 8 0 0 chr5 27556644 27557236 -172072914 + L1PA2 LINE L1 5561 6152 -3 303 99 28 14 chr5 27557871 27557942 -172072208 + (TA)n Simple_repeat Simple_repeat 2 73 0 263 316 76 80 chr5 27558649 27558899 -172071251 + L2 LINE L2 3004 3252 -20 300 260 58 31 chr5 27559318 27559473 -172070677 - MIR SINE MIR -57 151 37 298 290 61 30 chr5 27559676 27559807 -172070343 + MIR SINE MIR 68 202 -60 23 0 0 0 chr5 27560463 27560486 -172069664 + AT_rich Low_complexity Low_complexity 1 23 0 554 278 138 60 chr5 27560523 27561633 -172068517 - L1MEc LINE L1 -4098 2298 1102 222 224 15 60 chr5 27563248 27563315 -172066835 + MER5B DNA MER1_type 4 67 -111 2283 98 0 0 chr5 27563602 27563899 -172066251 - AluY SINE Alu -14 297 1 2231 95 0 3 chr5 27563905 27564199 -172065951 - AluSx SINE Alu -15 297 5 208 216 0 0 chr5 27564248 27564285 -172065865 + polypyrimidine Low_complexity Low_complexity 1 37 0 2498 133 38 12 chr5 27564673 27565094 -172065056 + MSTB1 LTR MaLR 1 432 0 211 200 22 0 chr5 27566773 27566818 -172063332 + CT-rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr5 27567016 27567044 -172063106 + AT_rich Low_complexity Low_complexity 1 28 0 767 338 63 43 chr5 27567396 27567793 -172062357 - LTR16C LTR ERVL 0 491 87 627 301 66 8 chr5 27567907 27568163 -172061987 + ERVL-E LTR ERVL 2876 3146 -2618 1422 285 96 91 chr5 27568163 27569698 -172060452 + ERVL-E LTR ERVL 4219 5761 -3 317 328 25 17 chr5 27569771 27569890 -172060260 + MLT2E LTR ERVL 34 153 -475 307 341 97 63 chr5 27571268 27571693 -172058457 + L2 LINE L2 2834 3272 0 707 347 51 13 chr5 27571855 27572230 -172057920 + LTR16B LTR ERVL 76 464 0 907 332 60 54 chr5 27572507 27572879 -172057271 + ERVL LTR ERVL 299 678 -4318 2557 40 0 10 chr5 27572879 27573183 -172056967 + AluY SINE Alu 1 301 -10 907 332 60 54 chr5 27573183 27573499 -172056651 + ERVL LTR ERVL 678 991 -4005 461 280 145 91 chr5 27573504 27573876 -172056274 + ERVL LTR ERVL 3986 4549 -619 431 222 0 0 chr5 27574089 27574179 -172055971 - Charlie5 DNA MER1_type -2522 90 1 24 32 0 0 chr5 27574356 27574387 -172055763 + AT_rich Low_complexity Low_complexity 1 31 0 218 390 0 0 chr5 27574593 27574675 -172055475 + MIR SINE MIR 73 154 -108 24 53 0 0 chr5 27576492 27576530 -172053620 + AT_rich Low_complexity Low_complexity 1 38 0 215 383 11 0 chr5 27576555 27576649 -172053501 - L2 LINE L2 0 3272 3178 2297 236 10 19 chr5 27576684 27577204 -172052946 + MLT2B2 LTR ERVL 1 515 0 638 238 17 65 chr5 27577254 27577451 -172052699 + MER58A DNA MER1_type 1 187 -2233 2171 117 0 3 chr5 27577451 27577758 -172052392 - AluSc SINE Alu -3 306 1 638 238 17 65 chr5 27577758 27577791 -172052359 + MER58A DNA MER1_type 187 220 -4 44 63 0 0 chr5 27577926 27578005 -172052145 + AT_rich Low_complexity Low_complexity 1 79 0 232 143 88 0 chr5 27578084 27578175 -172051975 + (TA)n Simple_repeat Simple_repeat 2 100 0 196 344 31 21 chr5 27578650 27578746 -172051404 - MIR SINE MIR -70 192 96 557 298 22 6 chr5 27580352 27580533 -172049617 - MIR SINE MIR -68 194 11 259 357 71 0 chr5 27580655 27580753 -172049397 - L2 LINE L2 -5 3308 3204 280 322 41 0 chr5 27581585 27581706 -172048444 + MLT1J2 LTR MaLR 59 184 -266 15674 194 57 7 chr5 27581858 27588084 -172042066 + L1PA14 LINE L1 61 6883 -716 2431 97 3 43 chr5 27588084 27588130 -172042020 - THE1A LTR MaLR 0 355 309 2388 82 0 3 chr5 27588130 27588434 -172041716 + AluY SINE Alu 1 303 -8 2431 97 3 43 chr5 27588434 27588757 -172041393 - THE1A LTR MaLR -46 309 1 3741 101 8 0 chr5 27588757 27589271 -172040879 - THE1A-int LTR MaLR 0 1580 1063 1124 175 13 0 chr5 27589261 27589490 -172040660 + L1P LINE L1 5058 5289 -857 * 7608 99 14 2 chr5 27589497 27590545 -172039605 - THE1A-int LTR MaLR -519 1061 1 2334 116 29 0 chr5 27590545 27590890 -172039260 - THE1A LTR MaLR 0 355 1 4948 106 4 0 chr5 27590891 27591599 -172038551 + L1PA14 LINE L1 6880 7590 -9 537 140 0 20 chr5 27594442 27594542 -172035608 + AluY SINE Alu 200 297 -14 190 273 66 58 chr5 27594753 27594874 -172035276 - MIR SINE MIR -81 181 60 2344 48 30 0 chr5 27595272 27595392 -172034758 + AluY SINE Alu 1 116 -195 369 0 0 0 chr5 27595392 27595433 -172034717 + (CA)n Simple_repeat Simple_repeat 2 42 0 2344 48 30 0 chr5 27595433 27595607 -172034543 + AluY SINE Alu 116 304 -7 319 318 27 0 chr5 27598272 27598382 -172031768 - L2 LINE L2 -8 3305 3193 296 295 0 0 chr5 27598442 27598520 -172031630 + (TG)n Simple_repeat Simple_repeat 1 78 0 387 0 0 0 chr5 27598556 27598599 -172031551 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1828 153 0 27 chr5 27598604 27598898 -172031252 - AluSx SINE Alu -26 286 1 29 70 0 0 chr5 27598995 27599052 -172031098 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr5 27599094 27599115 -172031035 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 27599291 27599328 -172030822 + AT_rich Low_complexity Low_complexity 1 37 0 195 343 102 9 chr5 27600204 27600312 -172029838 + MIR SINE MIR 66 183 -79 28 48 0 0 chr5 27600438 27600480 -172029670 + AT_rich Low_complexity Low_complexity 1 42 0 439 342 74 0 chr5 27600939 27601129 -172029021 + LTR16A LTR ERVL 146 349 -101 3130 189 42 31 chr5 27601152 27601871 -172028279 + LTR8A LTR ERV1 1 727 0 1278 94 0 21 chr5 27603399 27603412 -172026738 + AluY SINE Alu 121 133 -178 2402 63 0 19 chr5 27603412 27603729 -172026421 + AluY SINE Alu 1 311 0 1278 94 0 21 chr5 27603729 27603907 -172026243 + AluY SINE Alu 133 308 -3 727 352 150 37 chr5 27605149 27605204 -172024946 + L2 LINE L2 1882 1929 -1343 2225 104 0 0 chr5 27605204 27605511 -172024639 - AluSx SINE Alu -5 307 1 727 352 150 37 chr5 27605511 27605535 -172024615 + L2 LINE L2 1929 1949 -1323 2281 196 72 48 chr5 27605535 27606245 -172023905 - LTR8A LTR ERV1 0 727 1 727 352 150 37 chr5 27606245 27606315 -172023835 + L2 LINE L2 1949 2010 -1262 4776 113 7 7 chr5 27606315 27607006 -172023144 - LTR8 LTR ERV1 0 691 1 727 352 150 37 chr5 27607006 27607895 -172022255 + L2 LINE L2 2010 3040 -232 301 285 134 47 chr5 27608149 27608321 -172021829 + MIR3 SINE MIR 19 205 -3 29 28 0 0 chr5 27608344 27608380 -172021770 + AT_rich Low_complexity Low_complexity 1 36 0 307 274 151 28 chr5 27609676 27609928 -172020222 - L1ME4a LINE L1 -126 5995 5713 27 29 0 0 chr5 27610014 27610048 -172020102 + AT_rich Low_complexity Low_complexity 1 34 0 28 29 0 0 chr5 27610412 27610447 -172019703 + AT_rich Low_complexity Low_complexity 1 35 0 2009 165 12 0 chr5 27610830 27611163 -172018987 + MER1B DNA MER1_type 1 337 0 431 313 65 45 chr5 27611166 27611502 -172018648 - L1ME3A LINE L1 -264 5906 5564 29 28 0 0 chr5 27611553 27611589 -172018561 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr5 27611956 27611989 -172018161 + AT_rich Low_complexity Low_complexity 1 33 0 228 312 32 21 chr5 27612383 27612476 -172017674 + MIR SINE MIR 53 146 -116 202 200 0 29 chr5 27613131 27613201 -172016949 + (TA)n Simple_repeat Simple_repeat 1 68 0 234 0 0 0 chr5 27613223 27613249 -172016901 + (CA)n Simple_repeat Simple_repeat 1 26 0 594 0 0 0 chr5 27614575 27614641 -172015509 + (TA)n Simple_repeat Simple_repeat 1 66 0 1081 197 52 116 chr5 27614779 27615185 -172014965 + MLT1B LTR MaLR 11 390 0 237 65 0 0 chr5 27615322 27615353 -172014797 + (TG)n Simple_repeat Simple_repeat 2 32 0 2153 90 6 26 chr5 27615729 27616040 -172014110 + AluY SINE Alu 1 305 -6 1938 118 0 0 chr5 27616057 27616365 -172013785 + AluSq SINE Alu 21 328 0 26 50 0 0 chr5 27617083 27617123 -172013027 + AT_rich Low_complexity Low_complexity 1 40 0 1140 243 35 30 chr5 27617141 27617507 -172012643 - MER93b LTR ERV1 -1 372 5 838 149 8 0 chr5 27617660 27617794 -172012356 - MER50 LTR ERV1 -23 711 577 225 0 0 0 chr5 27668152 27668177 -171961973 + (A)n Simple_repeat Simple_repeat 1 25 0 1886 118 3 3 chr5 27668187 27668476 -171961674 + AluY SINE Alu 1 289 -22 1905 246 82 24 chr5 27668591 27669261 -171960889 + L1MCb LINE L1 435 1143 -4902 2667 245 145 26 chr5 27669263 27669389 -171960761 + L1MD3 LINE L1 5186 4419 -1727 2216 76 13 3 chr5 27669389 27669690 -171960460 + AluY SINE Alu 1 304 -7 2667 245 145 26 chr5 27669690 27670797 -171959353 + L1MD3 LINE L1 4418 5392 -754 2414 204 87 25 chr5 27670792 27671426 -171958724 + L1MC3 LINE L1 7094 7766 -19 * 239 340 102 30 chr5 27671535 27671732 -171958418 + MLT1J2 LTR MaLR 240 450 0 270 207 92 46 chr5 27671908 27671995 -171958155 - L2 LINE L2 -41 3231 3141 2285 98 3 0 chr5 27672265 27672572 -171957578 + AluSg1 SINE Alu 1 308 -1 21 0 0 0 chr5 27673393 27673414 -171956736 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 27674680 27674710 -171955440 + AT_rich Low_complexity Low_complexity 1 30 0 673 273 25 50 chr5 27675699 27675941 -171954209 - L1MD3 LINE L1 -1018 6977 6742 304 209 48 19 chr5 27675939 27676044 -171954106 + L1MD3 LINE L1 7880 7987 -8 * 2288 57 43 10 chr5 27676058 27676359 -171953791 + AluY SINE Alu 1 311 0 225 0 0 0 chr5 27676895 27676920 -171953230 + (A)n Simple_repeat Simple_repeat 1 25 0 2253 50 3 3 chr5 27676929 27677240 -171952910 + AluY SINE Alu 1 311 0 1494 180 64 15 chr5 27678030 27678358 -171951792 + MER2 DNA MER2_type 1 344 0 371 365 72 14 chr5 27680097 27680374 -171949776 + LTR16A LTR ERVL 78 370 -80 962 256 16 20 chr5 27680450 27680696 -171949454 + LTR53 LTR ERVL 189 433 -86 5734 40 0 1 chr5 27680721 27681424 -171948726 - L1PA4 LINE L1 -1073 5073 4372 7354 36 2 0 chr5 27681424 27682501 -171947649 + L1PA4 LINE L1 5070 6149 -6 186 143 0 0 chr5 27682576 27682611 -171947539 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 300 341 22 7 chr5 27682619 27682757 -171947393 - MIR SINE MIR -109 153 14 27 81 0 0 chr5 27682806 27682868 -171947282 + AT_rich Low_complexity Low_complexity 1 62 0 23 33 0 0 chr5 27683117 27683147 -171947003 + AT_rich Low_complexity Low_complexity 1 30 0 544 160 47 7 chr5 27683310 27683460 -171946690 + GA-rich Low_complexity Low_complexity 4 159 0 226 341 155 0 chr5 27684455 27684584 -171945566 - MIR3 SINE MIR -3 205 57 329 315 132 52 chr5 27685024 27685411 -171944739 + L2 LINE L2 2891 3308 -5 1799 215 47 92 chr5 27685782 27686383 -171943767 - MLT1E2 LTR MaLR 0 626 53 831 217 6 0 chr5 27688120 27688286 -171941864 + FAM SINE Alu 1 167 -8 942 187 115 19 chr5 27689658 27689867 -171940283 + MSTA LTR MaLR 197 425 -3 7983 202 18 13 chr5 27689867 27691508 -171938642 + MSTA-int LTR MaLR 2 1651 0 1885 173 96 10 chr5 27691508 27691902 -171938248 + MSTA LTR MaLR 1 428 0 2466 118 14 0 chr5 27692494 27692860 -171937290 + THE1C LTR MaLR 1 371 -4 27 0 0 0 chr5 27693039 27693066 -171937084 + AT_rich Low_complexity Low_complexity 1 27 0 1452 176 45 62 chr5 27694145 27694847 -171935303 - pTR5 LTR ERV1 -513 1480 119 2256 103 0 0 chr5 27697481 27697781 -171932369 - AluY SINE Alu -9 302 3 307 325 96 28 chr5 27698035 27698437 -171931713 + L1MC/D LINE L1 5482 5900 -347 706 69 6 114 chr5 27698767 27698942 -171931208 + AluSp/q SINE Alu 158 313 0 459 0 0 0 chr5 27698944 27698995 -171931155 + (TA)n Simple_repeat Simple_repeat 1 51 0 1179 280 117 42 chr5 27699096 27701108 -171929042 - L1MCc LINE L1 -3405 3536 1207 180 0 0 0 chr5 27701339 27701359 -171928791 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 270 380 9 0 chr5 27701379 27701492 -171928658 - ERVL LTR ERVL -2132 3632 3519 427 364 67 12 chr5 27701753 27702080 -171928070 - ERVL LTR ERVL -2536 3228 2884 744 59 20 0 chr5 27702081 27702240 -171927910 + AluYa5/8 SINE Alu 177 337 0 781 325 21 64 chr5 27702350 27702914 -171927236 - ERVL LTR ERVL -3046 2718 2179 21 0 0 0 chr5 27706197 27706218 -171923932 + AT_rich Low_complexity Low_complexity 1 21 0 2184 82 0 27 chr5 27707309 27707625 -171922525 - AluY SINE Alu 0 308 1 262 212 30 0 chr5 27707813 27707879 -171922271 + (CATA)n Simple_repeat Simple_repeat 1 68 0 1336 178 4 47 chr5 27707943 27708218 -171921932 - AluJo SINE Alu -13 299 37 207 246 0 66 chr5 27708571 27708632 -171921518 - L2 LINE L2 -8 3305 3249 2188 82 7 13 chr5 27709274 27709579 -171920571 - AluY SINE Alu -3 308 6 28 61 0 0 chr5 27711294 27711343 -171918807 + AT_rich Low_complexity Low_complexity 1 49 0 468 286 103 93 chr5 27711794 27712491 -171917659 + HAL1 LINE L1 963 1666 -841 191 149 0 21 chr5 27712846 27712893 -171917257 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 21 0 0 0 chr5 27712937 27712958 -171917192 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 27713460 27713490 -171916660 + AT_rich Low_complexity Low_complexity 1 30 0 271 289 52 21 chr5 27714299 27714396 -171915754 - MLT1H LTR MaLR -195 354 255 2456 114 28 14 chr5 27714397 27714756 -171915394 - THE1B LTR MaLR 0 364 1 269 337 125 19 chr5 27714842 27715106 -171915044 - L2 LINE L2 -759 2555 2264 1834 133 0 14 chr5 27715464 27715796 -171914354 - AluSx SINE Alu 0 338 11 183 308 0 87 chr5 27716060 27716164 -171913986 + MIR SINE MIR 80 174 -88 267 258 0 32 chr5 27717069 27717162 -171912988 + (TA)n Simple_repeat Simple_repeat 1 90 0 511 158 21 95 chr5 27717345 27717591 -171912559 + MER51A LTR ERV1 1 162 -215 * 1797 139 53 10 chr5 27717584 27717886 -171912264 + MER51B LTR ERV1 63 377 0 1678 170 22 19 chr5 27718338 27718655 -171911495 + MER1A DNA MER1_type 1 318 -211 673 118 0 20 chr5 27718655 27718757 -171911393 - MER4A LTR ERV1 0 664 565 * 805 212 110 57 chr5 27718754 27719018 -171911132 - LTR21A LTR ERV1 -16 489 212 578 190 0 0 chr5 27719186 27719286 -171910864 - MER4B LTR ERV1 -96 514 415 2322 61 0 3 chr5 27719289 27719583 -171910567 + AluY SINE Alu 4 296 -15 482 305 37 11 chr5 27719655 27719842 -171910308 + L1ME LINE L1 5515 5706 -458 334 118 0 0 chr5 27719852 27719929 -171910221 + AluJ/FRAM SINE Alu 232 308 0 248 175 0 0 chr5 27719929 27719969 -171910181 - MER4A LTR ERV1 -188 476 437 500 137 7 38 chr5 27719986 27720132 -171910018 - MER4A LTR ERV1 -203 461 262 531 144 21 10 chr5 27720133 27720230 -171909920 - MER4A LTR ERV1 -566 98 1 1323 138 24 0 chr5 27720230 27720440 -171909710 + MER1A DNA MER1_type 315 529 0 2201 81 0 7 chr5 27720569 27720866 -171909284 + AluY SINE Alu 16 310 -1 22 0 0 0 chr5 27721073 27721095 -171909055 + AT_rich Low_complexity Low_complexity 1 22 0 1009 172 37 5 chr5 27721205 27721420 -171908730 - L1MB3 LINE L1 -3 6180 5959 196 303 45 0 chr5 27721511 27721577 -171908573 + L2 LINE L2 2290 2358 -956 1557 212 5 61 chr5 27721687 27722097 -171908053 + MLT1B LTR MaLR 4 390 0 371 314 8 17 chr5 27722481 27722599 -171907551 - MER5A DNA MER1_type -30 159 43 773 257 87 30 chr5 27723722 27724057 -171906093 - MLT1A1 LTR MaLR -4 361 8 428 239 62 9 chr5 27724669 27724782 -171905368 + MER51D LTR ERV1 463 581 -76 21 36 0 0 chr5 27724922 27724950 -171905200 + AT_rich Low_complexity Low_complexity 1 28 0 30 59 0 0 chr5 27725154 27725205 -171904945 + AT_rich Low_complexity Low_complexity 1 51 0 373 329 55 20 chr5 27725815 27725961 -171904189 - MLT1K LTR MaLR -342 246 96 236 128 0 21 chr5 27726073 27726120 -171904030 + (TA)n Simple_repeat Simple_repeat 1 46 0 1693 219 3 16 chr5 27727128 27727498 -171902652 + MLT1A1 LTR MaLR 1 365 0 186 397 23 8 chr5 27727535 27727666 -171902484 + MIR SINE MIR 109 241 -21 263 232 0 29 chr5 27727772 27727841 -171902309 + MLT1H LTR MaLR 96 162 -387 303 177 0 0 chr5 27728158 27728220 -171901930 + CT-rich Low_complexity Low_complexity 1 62 0 345 24 0 0 chr5 27728654 27728696 -171901454 + (CA)n Simple_repeat Simple_repeat 1 42 0 3225 62 0 0 chr5 27728839 27729255 -171900895 - L1PA5 LINE L1 -8 6146 5731 1384 43 0 0 chr5 27729255 27729419 -171900731 + L1PA5 LINE L1 5574 5737 -417 26 30 0 0 chr5 27729967 27730000 -171900150 + AT_rich Low_complexity Low_complexity 1 33 0 203 301 14 0 chr5 27730979 27731052 -171899098 + (TATG)n Simple_repeat Simple_repeat 2 75 0 26 30 0 0 chr5 27731398 27731431 -171898719 + AT_rich Low_complexity Low_complexity 1 33 0 225 255 0 0 chr5 27733133 27733180 -171896970 + (CA)n Simple_repeat Simple_repeat 2 48 0 241 288 85 17 chr5 27733893 27734011 -171896139 + L3 LINE CR1 839 964 -613 199 374 12 0 chr5 27734278 27734361 -171895789 + L3 LINE CR1 1074 1157 -420 511 314 5 32 chr5 27734684 27734872 -171895278 + HERVL-F LTR ERVL 767 949 -4815 475 270 13 26 chr5 27735154 27735306 -171894844 + HERVL-F LTR ERVL 3100 3249 -2405 814 282 53 8 chr5 27735338 27735604 -171894546 + HERVL-F LTR ERVL 3364 3641 -2123 2574 274 63 20 chr5 27735610 27736857 -171893293 + L1ME1 LINE L1 4861 6160 -6 348 304 27 9 chr5 27736888 27737000 -171893150 + HERVL-F LTR ERVL 4442 4555 -1099 361 340 77 10 chr5 27737122 27737316 -171892834 + HERVL-F LTR ERVL 4745 4951 -813 653 288 49 57 chr5 27737367 27737993 -171892157 + HERVL-F LTR ERVL 4997 5752 -12 765 309 78 45 chr5 27737994 27738546 -171891604 + MLT2F LTR ERVL 46 655 -8 237 62 0 0 chr5 27738726 27738758 -171891392 - L1P LINE L1 -736 5420 5389 774 333 62 6 chr5 27738817 27739153 -171890997 + LTR16B LTR ERVL 110 464 0 319 286 27 81 chr5 27739466 27739493 -171890657 + MLT1G LTR MaLR 221 248 -342 3804 148 3 0 chr5 27739493 27740093 -171890057 + LTR43 LTR ERV1 1 602 0 319 286 27 81 chr5 27740093 27740250 -171889900 + MLT1G LTR MaLR 248 395 -195 467 310 94 19 chr5 27740280 27740493 -171889657 + MLT1G LTR MaLR 346 574 -16 2370 117 16 19 chr5 27740605 27740981 -171889169 - THE1C LTR MaLR 0 375 1 1895 141 3 14 chr5 27741518 27741808 -171888342 + AluSx SINE Alu 5 291 -21 321 159 65 9 chr5 27741880 27741987 -171888163 + (TA)n Simple_repeat Simple_repeat 1 113 0 203 331 124 0 chr5 27741987 27742108 -171888042 - MIR SINE MIR 0 262 127 488 95 27 0 chr5 27744249 27744323 -171885827 + MADE1 DNA Mariner 1 76 -4 1843 129 0 4 chr5 27744749 27745027 -171885123 + AluSq SINE Alu 35 311 -2 1258 295 28 36 chr5 27745236 27745707 -171884443 - MLT1C LTR MaLR 0 467 1 2157 185 18 8 chr5 27745917 27746312 -171883838 - MSTB LTR MaLR -27 399 1 185 347 20 0 chr5 27746455 27746504 -171883646 - MIR SINE MIR -160 102 53 22 0 0 0 chr5 27747411 27747433 -171882717 + AT_rich Low_complexity Low_complexity 1 22 0 414 400 91 9 chr5 27747442 27747672 -171882478 + MER115 DNA AcHobo 1 249 -444 * 749 384 12 21 chr5 27747667 27748203 -171881947 + MER115 DNA AcHobo 89 693 0 260 284 14 0 chr5 27749567 27749641 -171880509 + (TATATG)n Simple_repeat Simple_repeat 2 76 0 184 375 0 0 chr5 27749682 27749746 -171880404 - L3 LINE CR1 -3 1574 1511 2705 13 0 0 chr5 27750357 27750660 -171879490 + AluYa5 SINE Alu 1 303 -8 29 0 0 0 chr5 27750759 27750788 -171879362 + AT_rich Low_complexity Low_complexity 1 29 0 180 224 0 86 chr5 27751329 27751387 -171878763 - MIR3 SINE MIR -44 164 112 325 317 107 4 chr5 27752222 27752503 -171877647 + L1M4 LINE L1 2662 2971 -3175 264 160 0 0 chr5 27752597 27752647 -171877503 + L1ME3A LINE L1 1339 1388 -4996 * 3307 215 34 37 chr5 27752642 27753536 -171876614 + L1MB5 LINE L1 5276 6166 -8 598 278 111 74 chr5 27753638 27753970 -171876180 + L1ME3A LINE L1 3830 4148 -2234 2060 91 14 0 chr5 27753970 27754266 -171875884 + L1PA13 LINE L1 5845 6144 -19 598 278 111 74 chr5 27754266 27754888 -171875262 + L1ME3A LINE L1 4148 4746 -1636 312 27 0 0 chr5 27754888 27754925 -171875225 + (TG)n Simple_repeat Simple_repeat 1 37 0 598 278 111 74 chr5 27754925 27755158 -171874992 + L1ME3A LINE L1 4746 4969 -1413 2261 83 0 13 chr5 27755158 27755458 -171874692 + AluY SINE Alu 1 296 -15 598 278 111 74 chr5 27755458 27755597 -171874553 + L1ME3A LINE L1 4969 5207 -1175 2413 218 31 12 chr5 27755597 27756110 -171874040 + Tigger7 DNA MER2_type 1 523 -1964 450 250 0 0 chr5 27756112 27756200 -171873950 + Tigger7 DNA MER2_type 2400 2487 0 2252 90 0 7 chr5 27756219 27756520 -171873630 + AluY SINE Alu 13 311 0 480 332 40 35 chr5 27756523 27756893 -171873257 + L1ME3A LINE L1 5216 5587 -795 1641 176 46 30 chr5 27756943 27757312 -171872838 + THE1C LTR MaLR 1 375 0 8855 151 30 36 chr5 27757314 27758901 -171871249 + THE1C-int LTR MaLR 3 1579 -1 1247 203 67 41 chr5 27758901 27759239 -171870911 + THE1C LTR MaLR 1 402 -24 263 264 50 8 chr5 27759307 27759428 -171870722 + L1ME3A LINE L1 5691 5816 -590 593 296 40 25 chr5 27759465 27759742 -171870408 + L1ME3A LINE L1 6121 6401 -5 24 53 0 0 chr5 27759872 27759910 -171870240 + AT_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr5 27762324 27762349 -171867801 + AT_rich Low_complexity Low_complexity 1 25 0 955 238 84 82 chr5 27763098 27763598 -171866552 - MLT1D LTR MaLR -2 503 3 4011 108 26 8 chr5 27763811 27764434 -171865716 + L1PA10 LINE L1 5523 6156 -12 288 346 23 30 chr5 27765116 27765249 -171864901 - MLT2E LTR ERVL -460 168 37 225 0 0 0 chr5 27765415 27765440 -171864710 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 324 0 0 0 chr5 27765439 27765475 -171864675 + (CA)n Simple_repeat Simple_repeat 1 36 0 8185 229 25 59 chr5 27766011 27769044 -171861106 + L1P5 LINE L1 2567 5491 -660 34 24 0 0 chr5 27769140 27769181 -171860969 + AT_rich Low_complexity Low_complexity 1 41 0 584 341 48 8 chr5 27770506 27770758 -171859392 - MIR SINE MIR 0 262 1 23 54 0 0 chr5 27771109 27771146 -171859004 + AT_rich Low_complexity Low_complexity 1 37 0 305 174 116 0 chr5 27771338 27771424 -171858726 + L1MB3 LINE L1 6081 6176 -7 260 213 25 12 chr5 27771595 27771675 -171858475 + HAL1b LINE L1 1266 1346 -2 22 70 0 0 chr5 27771750 27771793 -171858357 + AT_rich Low_complexity Low_complexity 1 43 0 311 149 0 0 chr5 27772670 27772717 -171857433 + L1MA6 LINE L1 6062 6108 -192 1426 218 0 10 chr5 27772962 27773255 -171856895 + AluJo SINE Alu 2 291 -21 278 344 16 49 chr5 27773308 27773430 -171856720 - L2 LINE L2 -11 3261 3144 252 0 0 0 chr5 27773788 27773816 -171856334 + (TA)n Simple_repeat Simple_repeat 2 29 0 183 24 49 49 chr5 27773975 27774016 -171856134 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 472 134 0 0 chr5 27774020 27774087 -171856063 - AluS SINE Alu -26 286 220 337 276 0 35 chr5 27774248 27774335 -171855815 + L2 LINE L2 3227 3310 -3 1967 120 97 32 chr5 27774415 27774757 -171855393 + THE1B LTR MaLR 1 364 0 208 360 131 48 chr5 27775084 27775750 -171854400 - L2 LINE L2 -978 2336 1616 192 396 19 0 chr5 27775834 27775940 -171854210 - L2 LINE L2 -1840 1474 1367 1533 132 0 0 chr5 27777881 27778121 -171852029 + AluSq SINE Alu 68 307 0 210 143 0 0 chr5 27778220 27778255 -171851895 + (TA)n Simple_repeat Simple_repeat 2 36 0 1144 221 54 27 chr5 27778687 27779022 -171851128 + MER2 DNA MER2_type 1 344 0 1464 187 13 97 chr5 27780523 27780942 -171849208 - MER67C LTR ERV1 -243 271 1 326 275 0 0 chr5 27782395 27782475 -171847675 - MER96 DNA MER1_type? -78 97 18 963 325 32 3 chr5 27782481 27782795 -171847355 - MLT2F LTR ERVL -180 483 161 333 203 0 0 chr5 27782825 27782889 -171847261 - MLT2F LTR ERVL -596 67 4 561 319 86 32 chr5 27784565 27784973 -171845177 - MLT1J1 LTR MaLR -14 432 3 28 61 0 0 chr5 27785065 27785114 -171845036 + AT_rich Low_complexity Low_complexity 1 49 0 597 261 96 43 chr5 27786337 27786572 -171843578 - MER110 LTR ERV1 -7 484 228 2310 92 3 0 chr5 27786572 27786866 -171843284 + AluSc SINE Alu 1 295 -14 597 261 96 43 chr5 27786866 27786933 -171843217 - MER110 LTR ERV1 -263 228 166 894 202 30 20 chr5 27787391 27787589 -171842561 - MER3 DNA MER1_type -5 204 5 23 33 0 0 chr5 27787993 27788023 -171842127 + AT_rich Low_complexity Low_complexity 1 30 0 432 118 0 0 chr5 27788441 27788509 -171841641 + (TG)n Simple_repeat Simple_repeat 2 69 0 245 227 0 45 chr5 27788920 27788986 -171841164 - MIR SINE MIR -5 257 195 792 251 31 1 chr5 27789376 27789613 -171840537 - L1ME2 LINE L1 -259 5905 5712 1854 141 7 7 chr5 27789874 27790165 -171839985 + AluSp SINE Alu 1 291 -22 25 0 0 0 chr5 27790165 27790190 -171839960 + AT_rich Low_complexity Low_complexity 1 25 0 315 0 0 0 chr5 27790414 27790449 -171839701 + (CA)n Simple_repeat Simple_repeat 1 35 0 198 277 50 50 chr5 27790591 27790692 -171839458 + MIR SINE MIR 52 152 -110 376 203 0 0 chr5 27790898 27790977 -171839173 - L1 LINE L1 -1729 4417 4339 4790 171 5 42 chr5 27791002 27792810 -171837340 + L1PA6 LINE L1 4409 6154 0 2532 188 32 9 chr5 27792812 27793366 -171836784 + L1MA4 LINE L1 5724 6290 -10 1456 200 6 16 chr5 27793062 27793377 -171836773 + L1MA3 LINE L1 5994 6305 0 23 0 0 0 chr5 27793423 27793446 -171836704 + AT_rich Low_complexity Low_complexity 1 23 0 29 28 0 0 chr5 27794077 27794113 -171836037 + AT_rich Low_complexity Low_complexity 1 36 0 28 0 0 0 chr5 27794146 27794174 -171835976 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr5 27794350 27794383 -171835767 + AT_rich Low_complexity Low_complexity 1 33 0 291 302 147 16 chr5 27794620 27794749 -171835401 + MIR SINE MIR 109 254 -8 29 70 0 0 chr5 27795141 27795198 -171834952 + AT_rich Low_complexity Low_complexity 1 57 0 214 261 0 0 chr5 27795267 27795313 -171834837 + (CATA)n Simple_repeat Simple_repeat 3 48 0 262 385 7 14 chr5 27795737 27795885 -171834265 + MLT2E LTR ERVL 32 178 -450 21 0 0 0 chr5 27796877 27796898 -171833252 + AT_rich Low_complexity Low_complexity 1 21 0 416 172 0 43 chr5 27796947 27797040 -171833110 + MER57-int LTR ERV1 5257 5345 -2192 24 53 0 0 chr5 27797058 27797096 -171833054 + AT_rich Low_complexity Low_complexity 1 38 0 34 55 0 0 chr5 27797142 27797197 -171832953 + AT_rich Low_complexity Low_complexity 1 55 0 24 0 0 0 chr5 27797420 27797444 -171832706 + AT_rich Low_complexity Low_complexity 1 24 0 5272 48 0 0 chr5 27798101 27798745 -171831405 + L1PA5 LINE L1 5503 6146 -8 21 36 0 0 chr5 27798745 27798773 -171831377 + AT_rich Low_complexity Low_complexity 1 28 0 360 64 0 0 chr5 27799038 27799085 -171831065 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 459 293 7 0 chr5 27799618 27799765 -171830385 - MER110 LTR ERV1 -12 479 332 24 0 0 0 chr5 27799765 27799789 -171830361 + AT_rich Low_complexity Low_complexity 1 24 0 692 308 40 7 chr5 27799875 27800151 -171829999 - Charlie2 DNA MER1_type -2155 627 343 431 237 58 53 chr5 27800175 27800382 -171829768 - LTR37B LTR ERV1 -11 457 250 209 133 0 67 chr5 27800433 27800478 -171829672 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 857 239 44 17 chr5 27800661 27800975 -171829175 - AluY SINE Alu 0 322 1 375 226 24 0 chr5 27801092 27801176 -171828974 + L1MD3 LINE L1 6742 6827 -1168 401 286 71 24 chr5 27801297 27801465 -171828685 + Charlie8 DNA MER1_type 73 248 -2169 383 98 16 0 chr5 27801563 27801624 -171828526 + (TA)n Simple_repeat Simple_repeat 2 63 0 207 370 143 25 chr5 27801822 27801941 -171828209 - L2 LINE L2 -11 3261 3129 330 304 87 72 chr5 27802053 27802162 -171827988 - L2 LINE L2 -497 2817 2711 180 0 0 0 chr5 27802162 27802182 -171827968 + (TG)n Simple_repeat Simple_repeat 1 20 0 330 304 87 72 chr5 27802182 27802348 -171827802 - L2 LINE L2 -603 2711 2538 1649 225 11 3 chr5 27803560 27803920 -171826230 + MLT1A1 LTR MaLR 1 363 -2 22 35 0 0 chr5 27804864 27804893 -171825257 + AT_rich Low_complexity Low_complexity 1 29 0 181 386 50 10 chr5 27804918 27805019 -171825131 + L2 LINE L2 3164 3268 -4 615 187 8 8 chr5 27805767 27805890 -171824260 + FLAM_A SINE Alu 1 123 -10 229 313 40 40 chr5 27807249 27807348 -171822802 - MIR SINE MIR -87 121 23 23 0 0 0 chr5 27808433 27808456 -171821694 + AT_rich Low_complexity Low_complexity 1 23 0 243 260 20 0 chr5 27808667 27808767 -171821383 + (TATAA)n Simple_repeat Simple_repeat 2 103 0 308 329 106 59 chr5 27809463 27809867 -171820283 + L1M4 LINE L1 3540 3962 -2184 233 307 85 20 chr5 27809910 27810063 -171820087 + L1M4 LINE L1 4030 4192 -1954 466 338 52 54 chr5 27810183 27810686 -171819464 + L1M4 LINE L1 4332 4833 -1313 584 271 109 57 chr5 27810752 27811136 -171819014 + L1MC2 LINE L1 28 431 -5995 578 239 24 6 chr5 27811242 27811409 -171818741 + L1MC2 LINE L1 5538 5707 -2358 3804 187 54 67 chr5 27811430 27812394 -171817756 + L1MCa LINE L1 47 997 -5429 1107 220 68 114 chr5 27812394 27812789 -171817361 - MSTD LTR MaLR 0 396 20 1478 157 111 98 chr5 27812797 27813276 -171816874 + L1MCa LINE L1 998 1482 -4944 * 2219 223 74 39 chr5 27813273 27813424 -171816726 + L1MC2 LINE L1 5693 5837 -787 1815 167 39 25 chr5 27813424 27813783 -171816367 + THE1B LTR MaLR 1 364 0 11339 95 9 2 chr5 27813783 27815352 -171814798 + THE1B-int LTR MaLR 1 1580 0 2069 148 39 20 chr5 27815352 27815709 -171814441 + THE1B LTR MaLR 1 364 0 2219 223 74 39 chr5 27815709 27816267 -171813883 + L1MC2 LINE L1 5836 6429 -195 209 238 63 0 chr5 27816524 27816587 -171813563 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 1006 297 95 48 chr5 27816660 27817795 -171812355 + L1ME2 LINE L1 1171 2252 -4174 2792 173 23 17 chr5 27817795 27818316 -171811834 - MER1A DNA MER1_type -3 524 1 1006 297 95 48 chr5 27818316 27819174 -171810976 + L1ME2 LINE L1 2252 3420 -3006 423 231 103 0 chr5 27819178 27819295 -171810855 - MLT1H1 LTR MaLR 0 555 427 509 383 17 14 chr5 27819498 27819843 -171810307 - LTR16A LTR ERVL 0 450 105 1690 258 99 21 chr5 27819941 27820668 -171809482 + L1ME2 LINE L1 5542 6324 -120 266 194 14 0 chr5 27820688 27820760 -171809390 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 398 244 119 42 chr5 27820993 27821033 -171809117 + L1MC5 LINE L1 7709 7744 -217 1487 201 3 33 chr5 27821033 27821337 -171808813 - AluJb SINE Alu -17 295 1 398 244 119 42 chr5 27821337 27821489 -171808661 + L1MC5 LINE L1 7744 7916 -45 670 243 58 40 chr5 27822944 27823165 -171806985 + MER20 DNA MER1_type 1 219 0 372 298 32 25 chr5 27823206 27823364 -171806786 + MIR SINE MIR 101 259 -3 324 48 0 0 chr5 27823443 27823485 -171806665 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 294 302 9 9 chr5 27824025 27824141 -171806009 + L1MCc LINE L1 82 197 -6226 1096 274 80 34 chr5 27824467 27825094 -171805056 + L1M4 LINE L1 4654 5309 -837 226 267 78 33 chr5 27825681 27825771 -171804379 + MLT1I LTR MaLR 73 166 -243 1028 236 65 96 chr5 27827513 27827564 -171802586 - MLT2B1 LTR ERVL 0 520 469 482 0 17 0 chr5 27827564 27827622 -171802528 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 1028 236 65 96 chr5 27827622 27827847 -171802303 - MLT2B1 LTR ERVL -51 469 239 195 42 0 0 chr5 27827847 27827871 -171802279 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1028 236 65 96 chr5 27827871 27828127 -171802023 - MLT2B1 LTR ERVL -281 239 3 310 295 27 9 chr5 27829074 27829186 -171800964 - MLT1J1 LTR MaLR -278 168 55 200 286 20 20 chr5 27829752 27829850 -171800300 + (TATATG)n Simple_repeat Simple_repeat 3 100 0 39 0 0 0 chr5 27829987 27830026 -171800124 + AT_rich Low_complexity Low_complexity 1 39 0 27 49 0 0 chr5 27830168 27830209 -171799941 + AT_rich Low_complexity Low_complexity 1 41 0 2713 179 45 70 chr5 27830372 27831059 -171799091 - L1MA10 LINE L1 -14 6320 5651 1488 227 28 6 chr5 27831059 27831416 -171798734 + MLT1A1 LTR MaLR 1 365 0 357 260 68 20 chr5 27831428 27831574 -171798576 + L1 LINE L1 4950 5102 -1044 243 300 106 76 chr5 27831577 27832000 -171798150 - HsTC2a DNA Tc2 -279 465 30 22 0 0 0 chr5 27832171 27832193 -171797957 + AT_rich Low_complexity Low_complexity 1 22 0 1989 131 3 13 chr5 27832456 27832768 -171797382 + AluSx SINE Alu 4 312 0 354 23 0 0 chr5 27833533 27833576 -171796574 + (TG)n Simple_repeat Simple_repeat 2 44 0 26 93 0 0 chr5 27834284 27834359 -171795791 + AT_rich Low_complexity Low_complexity 1 75 0 1295 199 6 67 chr5 27886007 27886323 -171743827 + AluJo SINE Alu 1 297 -15 214 254 7 148 chr5 27886515 27886657 -171743493 - L2 LINE L2 -32 3281 3160 21 0 0 0 chr5 27886795 27886816 -171743334 + AT_rich Low_complexity Low_complexity 1 21 0 36 0 0 0 chr5 27887789 27887825 -171742325 + AT_rich Low_complexity Low_complexity 1 36 0 189 74 0 0 chr5 27890321 27890348 -171739802 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 312 231 109 0 chr5 27891480 27891576 -171738574 - MLT1I LTR MaLR -5 434 310 400 311 47 31 chr5 27891679 27891872 -171738278 - MLT1J2 LTR MaLR -254 196 1 341 197 13 26 chr5 27892135 27892211 -171737939 + L1ME2 LINE L1 5972 6046 -118 24 32 0 0 chr5 27892379 27892410 -171737740 + AT_rich Low_complexity Low_complexity 1 31 0 1809 171 59 35 chr5 27892791 27893213 -171736937 - MSTB1 LTR MaLR 0 432 1 411 73 0 0 chr5 27894149 27894204 -171735946 + (TG)n Simple_repeat Simple_repeat 2 56 0 315 0 0 0 chr5 27895234 27895269 -171734881 + (TG)n Simple_repeat Simple_repeat 2 36 0 323 273 73 53 chr5 27895419 27895879 -171734271 + L1M4 LINE L1 4310 4792 -1354 29 0 0 0 chr5 27896476 27896505 -171733645 + AT_rich Low_complexity Low_complexity 1 29 0 221 333 117 0 chr5 27896520 27896631 -171733519 + MIR SINE MIR 48 171 -91 2104 131 230 2 chr5 27896965 27897361 -171732789 + LTR12 LTR ERV1 2 487 -227 2181 199 75 140 chr5 27897505 27898416 -171731734 - MER21B LTR ERV1 0 902 71 359 138 0 0 chr5 27898514 27898572 -171731578 - MER21A LTR ERV1 -861 70 13 22 0 0 0 chr5 27898999 27899021 -171731129 + AT_rich Low_complexity Low_complexity 1 22 0 8427 120 17 8 chr5 27899051 27900321 -171729829 - HSMAR1 DNA Mariner -5 1282 1 21 0 0 0 chr5 27900351 27900372 -171729778 + AT_rich Low_complexity Low_complexity 1 21 0 21 95 0 0 chr5 27902670 27902733 -171727417 + AT_rich Low_complexity Low_complexity 1 63 0 42 65 0 0 chr5 27902962 27903039 -171727111 + AT_rich Low_complexity Low_complexity 1 77 0 24 32 0 0 chr5 27903573 27903604 -171726546 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr5 27903836 27903871 -171726279 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 27904874 27904898 -171725252 + AT_rich Low_complexity Low_complexity 1 24 0 1372 88 0 21 chr5 27905191 27905383 -171724767 - AluSg/x SINE Alu -17 295 108 317 230 47 20 chr5 27905653 27905801 -171724349 + L1ME LINE L1 945 1096 -5109 233 250 0 0 chr5 27905808 27905864 -171724286 + L1ME LINE L1 2312 2367 -4029 230 191 21 0 chr5 27905966 27906013 -171724137 + L1ME LINE L1 1161 1208 -4997 2152 184 22 5 chr5 27906152 27906566 -171723584 + MER61C LTR ERV1 14 434 0 763 196 24 100 chr5 27906566 27906816 -171723334 + MER61C-int LTR ERV1 2 232 -4985 * 26891 137 37 28 chr5 27906793 27911620 -171718530 + MER61C-int LTR ERV1 343 5213 -4 2223 181 35 6 chr5 27911620 27912051 -171718099 + MER61C LTR ERV1 6 434 0 393 291 108 21 chr5 27912051 27912485 -171717665 + L1ME LINE L1 1096 1569 -4511 333 323 51 15 chr5 27912459 27912654 -171717496 + L1ME LINE L1 2110 2311 -3769 * 6679 28 0 0 chr5 27912656 27913469 -171716681 + L1PA3 LINE L1 5355 6167 0 780 255 144 23 chr5 27913469 27913905 -171716245 + L1ME LINE L1 2353 2841 -3239 365 304 49 0 chr5 27913906 27914008 -171716142 + L2 LINE L2 3191 3297 -16 2147 113 7 7 chr5 27914998 27915308 -171714842 - AluSg SINE Alu 0 310 1 181 250 0 0 chr5 27915380 27915420 -171714730 - L2 LINE L2 -1 3312 3273 203 176 0 0 chr5 27915841 27915875 -171714275 + (TG)n Simple_repeat Simple_repeat 1 34 0 384 240 118 36 chr5 27915875 27916096 -171714054 - Charlie4 DNA MER1_type -20 1941 1703 439 330 54 10 chr5 27916588 27916791 -171713359 - MIR SINE MIR -26 236 25 216 97 0 0 chr5 27917284 27917315 -171712835 + (TA)n Simple_repeat Simple_repeat 2 32 0 22 56 0 0 chr5 27917483 27917519 -171712631 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 27918514 27918536 -171711614 + AT_rich Low_complexity Low_complexity 1 22 0 1084 110 0 0 chr5 27918660 27918815 -171711335 - AluSp/q SINE Alu 0 313 159 198 349 105 0 chr5 27920063 27920215 -171709935 - L2 LINE L2 -961 2353 2186 1526 158 26 8 chr5 27920454 27920719 -171709431 - AluSx SINE Alu -4 308 39 186 355 53 26 chr5 27920777 27920966 -171709184 + L2 LINE L2 2660 2853 -461 299 287 23 0 chr5 27921223 27921310 -171708840 + GA-rich Low_complexity Low_complexity 3 91 0 21 0 0 0 chr5 27921750 27921771 -171708379 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 27922490 27922511 -171707639 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 27922964 27923002 -171707148 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr5 27923019 27923047 -171707103 + AT_rich Low_complexity Low_complexity 1 28 0 31 44 0 0 chr5 27923094 27923139 -171707011 + AT_rich Low_complexity Low_complexity 1 45 0 221 263 0 154 chr5 27924020 27924279 -171705871 + L2 LINE L2 1570 1788 -1526 238 175 0 0 chr5 27924288 27924328 -171705822 + Alu SINE Alu 3 42 -266 466 99 0 0 chr5 27924328 27924399 -171705751 + Alu SINE Alu 232 302 -10 284 329 183 30 chr5 27924505 27924937 -171705213 + L2 LINE L2 1854 2351 -963 1083 358 64 17 chr5 27925382 27926137 -171704013 - HERV16 LTR ERVL -2213 2783 1994 262 242 30 40 chr5 27926146 27926245 -171703905 - MLT1I LTR MaLR -41 368 271 454 317 77 59 chr5 27927124 27927462 -171702688 + LTR33 LTR ERVL 3 346 -175 2561 53 0 0 chr5 27927475 27927779 -171702371 - AluY SINE Alu -7 304 1 22 70 0 0 chr5 27928048 27928091 -171702059 + AT_rich Low_complexity Low_complexity 1 43 0 2147 97 23 3 chr5 27930014 27930314 -171699836 - AluY SINE Alu -5 306 1 206 373 51 0 chr5 27930402 27930520 -171699630 + MIR SINE MIR 118 241 -21 370 230 7 12 chr5 27930664 27930809 -171699341 + MER20 DNA MER1_type 1 219 0 335 310 17 9 chr5 27932644 27932760 -171697390 - L2 LINE L2 -5 3308 3192 26 0 0 0 chr5 27933057 27933083 -171697067 + AT_rich Low_complexity Low_complexity 1 26 0 25 51 0 0 chr5 27934217 27934256 -171695894 + AT_rich Low_complexity Low_complexity 1 39 0 242 236 0 0 chr5 27934346 27934401 -171695749 + L1MC4 LINE L1 6649 6703 -1339 * 256 250 21 73 chr5 27934399 27934495 -171695655 - L1MC4 LINE L1 -1339 6703 6613 195 42 0 0 chr5 27934589 27934613 -171695537 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2418 52 0 13 chr5 27934615 27934920 -171695230 - AluY SINE Alu -10 301 1 231 211 0 0 chr5 27935513 27935565 -171694585 - L1MA9 LINE L1 -13 6299 6248 1694 157 60 43 chr5 27936045 27936414 -171693736 - THE1C LTR MaLR 0 375 1 8955 138 17 38 chr5 27936414 27938024 -171692126 - THE1C-int LTR MaLR 0 1580 4 1195 181 102 42 chr5 27938027 27938381 -171691769 - THE1C LTR MaLR 0 375 1 1648 181 20 16 chr5 27939223 27939526 -171690624 + AluJb SINE Alu 3 306 -6 328 291 9 27 chr5 27940162 27940272 -171689878 + MIR SINE MIR 64 171 -91 1769 117 0 0 chr5 27940456 27940712 -171689438 + AluSx SINE Alu 38 293 -19 32 67 0 0 chr5 27941023 27941083 -171689067 + AT_rich Low_complexity Low_complexity 1 60 0 2307 91 0 0 chr5 27942067 27942364 -171687786 - AluSc SINE Alu -6 303 7 27 87 0 0 chr5 27942657 27942726 -171687424 + AT_rich Low_complexity Low_complexity 1 69 0 1886 122 21 10 chr5 27942794 27943082 -171687068 - AluSx SINE Alu -13 299 9 214 354 51 36 chr5 27943881 27944076 -171686074 + MIR SINE MIR 57 254 -8 2235 164 16 47 chr5 27944157 27944417 -171685733 + L1MA9 LINE L1 5837 6077 -235 715 161 39 15 chr5 27944417 27944547 -171685603 - FLAM_C SINE Alu 0 133 1 2235 164 16 47 chr5 27944547 27944773 -171685377 + L1MA9 LINE L1 6077 6308 -4 524 233 69 31 chr5 27945784 27945943 -171684207 - L1MB7 LINE L1 -7 6177 6013 2590 235 52 25 chr5 27945953 27945992 -171684158 + L1M4 LINE L1 3415 3451 -2695 2389 94 0 0 chr5 27945992 27946301 -171683849 + AluSc SINE Alu 1 309 0 2590 235 52 25 chr5 27946301 27947048 -171683102 + L1M4 LINE L1 3451 4222 -1924 2471 201 23 23 chr5 27947063 27947595 -171682555 + Tigger1 DNA MER2_type 24 555 -1863 1217 277 16 8 chr5 27947595 27947981 -171682169 + L1M4 LINE L1 4696 5084 -1062 2821 85 20 15 chr5 27948234 27948636 -171681514 - MLT2A1 LTR ERVL -40 404 1 41896 93 6 2 chr5 27948636 27954264 -171675886 - HERVL-A1 LTR ERVL 0 5654 4 2802 100 20 35 chr5 27954267 27954307 -171675843 - MLT2A1 LTR ERVL 0 444 405 486 0 0 0 chr5 27954307 27954361 -171675789 + (TA)n Simple_repeat Simple_repeat 2 55 0 2802 100 20 35 chr5 27954361 27954771 -171675379 - MLT2A1 LTR ERVL -39 405 1 680 221 97 66 chr5 27954771 27955060 -171675090 + MLT1D LTR MaLR 152 449 -56 313 276 73 104 chr5 27955659 27955851 -171674299 + L1MC5 LINE L1 7746 7931 -30 2740 7 0 10 chr5 27956279 27956587 -171673563 + AluYa5 SINE Alu 1 305 -6 1121 234 0 58 chr5 27957703 27958062 -171672088 - MER52A LTR ERV1 -34 1721 1384 1584 71 0 0 chr5 27958084 27958280 -171671870 + AluSg/x SINE Alu 113 308 -2 314 287 49 15 chr5 27958469 27958619 -171671531 + MLT1F1 LTR MaLR 417 559 -8 308 224 15 22 chr5 27958706 27958840 -171671310 + (TTA)n Simple_repeat Simple_repeat 2 134 0 264 229 0 0 chr5 27958840 27958888 -171671262 - MLT1B LTR MaLR -336 54 7 * 568 246 0 0 chr5 27958885 27959007 -171671143 + MLT1B LTR MaLR 21 142 -248 886 213 91 15 chr5 27959008 27959271 -171670879 + MLT1B LTR MaLR 67 349 -41 477 0 0 0 chr5 27959810 27959863 -171670287 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 222 37 0 0 chr5 27959863 27959890 -171670260 + (GA)n Simple_repeat Simple_repeat 2 28 0 290 286 97 62 chr5 27960810 27961069 -171669081 + L2 LINE L2 1806 2073 -1241 329 300 30 0 chr5 27961093 27961193 -171668957 - LTR40a LTR ERVL -413 106 4 596 220 135 10 chr5 27961878 27962078 -171668072 - L1MC2 LINE L1 -98 6246 6022 * 6938 252 27 63 chr5 27962069 27963428 -171666722 - L1PA12 LINE L1 -2001 5583 4176 225 0 0 0 chr5 27963428 27963453 -171666697 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 6938 252 27 63 chr5 27963453 27965653 -171664497 - L1PA12 LINE L1 -3408 4176 2176 588 382 0 13 chr5 27965645 27965870 -171664280 - L1PA12 LINE L1 -6564 1010 789 * 375 194 101 23 chr5 27966074 27966203 -171663947 - L1MCb LINE L1 -3214 3350 3212 2080 248 42 15 chr5 27966239 27966695 -171663455 - MER70B LTR ERVL -108 470 3 1512 266 28 10 chr5 27966699 27967200 -171662950 - L1MCb LINE L1 -3350 3214 2705 832 284 30 85 chr5 27967248 27967780 -171662370 - L1MCb LINE L1 -5540 505 3 223 338 92 44 chr5 27968021 27968249 -171661901 - MIR SINE MIR -6 256 18 182 116 23 0 chr5 27969221 27969264 -171660886 + (TG)n Simple_repeat Simple_repeat 1 44 0 21 36 0 0 chr5 27970436 27970464 -171659686 + AT_rich Low_complexity Low_complexity 1 28 0 32 43 0 0 chr5 27970534 27970580 -171659570 + AT_rich Low_complexity Low_complexity 1 46 0 527 219 22 44 chr5 27971048 27971185 -171658965 - LTR5 LTR ERVK -835 134 1 1363 240 116 24 chr5 27971185 27972217 -171657933 + L1MC3 LINE L1 1871 3001 -3425 1598 181 5 32 chr5 27972319 27972700 -171657450 - L1PA16 LINE L1 -592 5574 5204 2913 152 44 67 chr5 27972703 27973297 -171656853 + L1PA16 LINE L1 5581 6160 -6 1224 266 49 18 chr5 27973303 27973750 -171656400 + L1MC3 LINE L1 4670 5130 -1296 1042 200 46 72 chr5 27973763 27974108 -171656042 + L1MC3 LINE L1 5966 6301 -1764 313 264 123 43 chr5 27974132 27974295 -171655855 - L1M4 LINE L1 -3157 2989 2814 4800 209 35 63 chr5 27974335 27975715 -171654435 + L1MC3 LINE L1 6327 7668 -397 711 221 22 50 chr5 27975716 27975938 -171654212 + L1MC3 LINE L1 7819 8034 -31 1687 147 13 121 chr5 27975940 27976327 -171653823 - MER7A DNA MER2_type -1 345 3 23 0 0 0 chr5 27976666 27976689 -171653461 + AT_rich Low_complexity Low_complexity 1 23 0 2554 115 3 3 chr5 27976881 27977255 -171652895 + THE1C LTR MaLR 2 375 0 9592 146 28 5 chr5 27977255 27978799 -171651351 + THE1C-int LTR MaLR 1 1580 0 2465 99 16 37 chr5 27978799 27979181 -171650969 + THE1C LTR MaLR 1 374 -1 261 128 43 0 chr5 27980090 27980137 -171650013 + L1MC4 LINE L1 6652 6700 -1342 26 50 0 0 chr5 27980297 27980337 -171649813 + AT_rich Low_complexity Low_complexity 1 40 0 22 35 0 0 chr5 27980567 27980596 -171649554 + AT_rich Low_complexity Low_complexity 1 29 0 3625 150 0 2 chr5 27981103 27981690 -171648460 - L1PA13 LINE L1 -11 6152 5567 5122 149 14 5 chr5 27981697 27983233 -171646917 + L1PA15 LINE L1 4619 6160 -5 5355 260 36 45 chr5 27983233 27986602 -171643548 - L1PA13 LINE L1 -2943 3854 1 321 125 0 18 chr5 27986610 27986666 -171643484 + L1MB7 LINE L1 6111 6165 -19 30 0 0 0 chr5 27986989 27987019 -171643131 + AT_rich Low_complexity Low_complexity 1 30 0 31 26 0 0 chr5 27987156 27987194 -171642956 + AT_rich Low_complexity Low_complexity 1 38 0 1650 208 19 19 chr5 27988417 27988782 -171641368 - MLT1A1 LTR MaLR 0 365 1 29 0 0 0 chr5 27989130 27989159 -171640991 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 27989911 27989953 -171640197 + AT_rich Low_complexity Low_complexity 1 42 0 1317 268 105 22 chr5 27991030 27991766 -171638384 - L1M4 LINE L1 -2260 3886 3090 23 0 0 0 chr5 27991805 27991828 -171638322 + AT_rich Low_complexity Low_complexity 1 23 0 1598 147 14 11 chr5 27991835 27992120 -171638030 - L1MA6 LINE L1 -5 6295 6010 2507 107 80 5 chr5 27992120 27992511 -171637639 + L1PA11 LINE L1 5743 6174 0 1392 266 49 4 chr5 27992519 27992985 -171637165 + L1MB8 LINE L1 3569 4055 -2091 * 1728 226 68 3 chr5 27992974 27993501 -171636649 + L1MB8 LINE L1 5513 6117 -67 358 261 139 35 chr5 27993511 27993626 -171636524 + MER5A DNA MER1_type 60 186 -3 333 310 0 120 chr5 27993869 27994069 -171636081 - MER5B DNA MER1_type -1 177 2 257 254 197 0 chr5 27994377 27994448 -171635702 - L2 LINE L2 -30 3242 3158 325 291 156 7 chr5 27994843 27994984 -171635166 - MER5B DNA MER1_type -16 162 1 213 259 51 134 chr5 27995481 27995659 -171634491 - L2 LINE L2 -10 3303 3112 1955 117 7 3 chr5 27995659 27995972 -171634178 + AluSp SINE Alu 1 314 0 213 259 51 134 chr5 27995972 27996063 -171634087 - L2 LINE L2 -201 3112 3064 2102 101 14 3 chr5 27996063 27996360 -171633790 + AluSc SINE Alu 1 300 -9 213 259 51 134 chr5 27996360 27996424 -171633726 - L2 LINE L2 -249 3064 2996 623 278 55 3 chr5 27997309 27997600 -171632550 + Charlie4a DNA MER1_type 77 382 -126 31 44 0 0 chr5 27997919 27997964 -171632186 + AT_rich Low_complexity Low_complexity 1 45 0 21 57 0 0 chr5 27998595 27998630 -171631520 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 27998832 27998863 -171631287 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr5 27999121 27999158 -171630992 + AT_rich Low_complexity Low_complexity 1 37 0 680 285 61 20 chr5 27999584 27999830 -171630320 + MIR SINE MIR 7 262 0 21 82 0 0 chr5 28000636 28000685 -171629465 + AT_rich Low_complexity Low_complexity 1 49 0 24 53 0 0 chr5 28002719 28002757 -171627393 + AT_rich Low_complexity Low_complexity 1 38 0 888 192 158 0 chr5 28003789 28003992 -171626158 - MER46A DNA MER2_type -1 235 1 219 242 0 0 chr5 28004124 28004186 -171625964 + (TA)n Simple_repeat Simple_repeat 1 62 0 1439 265 25 92 chr5 28004493 28005124 -171625026 + MLT1E LTR MaLR 1 589 -4 776 165 88 29 chr5 28005390 28005652 -171624498 + MER44D DNA MER2_type 2 517 -92 1135 184 43 4 chr5 28005655 28005889 -171624261 - Tigger2a DNA MER2_type 0 444 202 534 175 62 0 chr5 28005890 28005987 -171624163 + AluSq/x SINE Alu 3 105 -208 951 212 13 42 chr5 28006045 28006281 -171623869 - Tigger2a DNA MER2_type -205 229 1 382 237 66 0 chr5 28006281 28006356 -171623794 + MER44D DNA MER2_type 523 602 -7 240 86 0 0 chr5 28006475 28006510 -171623640 + (TC)n Simple_repeat Simple_repeat 1 35 0 24 85 0 0 chr5 28006726 28006785 -171623365 + AT_rich Low_complexity Low_complexity 1 59 0 207 94 38 19 chr5 28006787 28006840 -171623310 + A-rich Low_complexity Low_complexity 3 56 0 26 0 0 0 chr5 28006840 28006866 -171623284 + AT_rich Low_complexity Low_complexity 1 26 0 636 244 2 5 chr5 28006866 28007058 -171623092 + L1MB5 LINE L1 5660 5849 -325 21 36 0 0 chr5 28007060 28007088 -171623062 + AT_rich Low_complexity Low_complexity 1 28 0 4032 189 33 9 chr5 28007282 28008665 -171621485 + L1PB4 LINE L1 4376 5791 -365 422 202 16 33 chr5 28008665 28008848 -171621302 + (TA)n Simple_repeat Simple_repeat 1 180 0 1731 182 62 0 chr5 28008891 28009232 -171620918 + L1PB4 LINE L1 5782 6143 -13 28 71 0 0 chr5 28009265 28009321 -171620829 + AT_rich Low_complexity Low_complexity 1 56 0 2245 60 0 18 chr5 28009675 28009959 -171620191 + AluY SINE Alu 1 279 -32 360 0 0 0 chr5 28009959 28009999 -171620151 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1187 211 19 0 chr5 28010013 28010273 -171619877 + L1MA9 LINE L1 6010 6274 -38 28 0 0 0 chr5 28010273 28010301 -171619849 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 28010956 28010978 -171619172 + AT_rich Low_complexity Low_complexity 1 22 0 315 336 17 9 chr5 28011898 28012014 -171618136 + MIR3 SINE MIR 87 203 -5 26 0 0 0 chr5 28012525 28012551 -171617599 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 28012617 28012638 -171617512 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr5 28013204 28013233 -171616917 + (TA)n Simple_repeat Simple_repeat 2 30 0 717 312 66 45 chr5 28013734 28014308 -171615842 - ERVL LTR ERVL -102 5662 5077 1864 102 18 21 chr5 28014321 28014604 -171615546 + AluSx SINE Alu 29 310 -2 1005 293 43 29 chr5 28014651 28015367 -171614783 - ERVL LTR ERVL -932 4832 4053 709 261 118 62 chr5 28016650 28017056 -171613094 + MLT1E2 LTR MaLR 21 449 -177 12475 237 34 17 chr5 28018784 28021331 -171608819 - L1PA16 LINE L1 -9 7595 5092 1575 105 18 0 chr5 28021331 28021580 -171608570 - AluY SINE Alu 0 315 63 12475 237 34 17 chr5 28021580 28021882 -171608268 - L1PA16 LINE L1 -2512 5092 4797 341 22 22 0 chr5 28021882 28021928 -171608222 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 12475 237 34 17 chr5 28021928 28024347 -171605803 - L1PA16 LINE L1 -2807 4797 2197 296 320 0 0 chr5 28024594 28024691 -171605459 - L1PA16 LINE L1 -5400 2181 2085 574 330 33 48 chr5 28024745 28025285 -171604865 - L1PA16 LINE L1 -6167 1407 876 284 222 69 0 chr5 28025399 28025471 -171604679 - MIR SINE MIR -110 152 76 24 96 0 0 chr5 28025799 28025872 -171604278 + AT_rich Low_complexity Low_complexity 1 73 0 22 70 0 0 chr5 28026717 28026760 -171603390 + AT_rich Low_complexity Low_complexity 1 43 0 1648 138 78 67 chr5 28030172 28030543 -171599607 - THE1C LTR MaLR 0 375 1 1483 301 87 15 chr5 28030693 28031277 -171598873 - MLT1E2 LTR MaLR 0 626 1 281 257 134 34 chr5 28031818 28031997 -171598153 - MIR SINE MIR 0 262 66 356 268 71 42 chr5 28032729 28032897 -171597253 - MLT1J2 LTR MaLR 0 450 278 405 301 98 20 chr5 28033246 28033399 -171596751 + Charlie1 DNA MER1_type 7 171 -2590 305 314 17 0 chr5 28033432 28033550 -171596600 + Charlie1 DNA MER1_type 2637 2756 -5 21 89 0 0 chr5 28033604 28033660 -171596490 + AT_rich Low_complexity Low_complexity 1 56 0 3946 164 25 31 chr5 28033864 28034668 -171595482 - Tigger3b DNA MER2_type 0 1231 433 1791 174 81 0 chr5 28034647 28034980 -171595170 - Tigger3b DNA MER2_type -869 362 3 * 215 215 28 9 chr5 28034992 28035099 -171595051 + (TA)n Simple_repeat Simple_repeat 1 109 0 1587 299 119 27 chr5 28035100 28037624 -171592526 + L1ME2 LINE L1 1306 4019 -2196 734 258 219 7 chr5 28037691 28038148 -171592002 + L1ME2 LINE L1 4864 5417 -798 305 283 22 0 chr5 28038162 28038254 -171591896 + L1ME2 LINE L1 5450 5543 -704 452 261 23 28 chr5 28038311 28038487 -171591663 + L1ME2 LINE L1 5905 6079 -154 213 94 0 0 chr5 28038657 28038689 -171591461 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2919 176 96 20 chr5 28038913 28039573 -171590577 - MER67C LTR ERV1 0 710 1 378 269 10 10 chr5 28039717 28039821 -171590329 + L1MC2 LINE L1 6239 6342 -2 1234 164 14 0 chr5 28140242 28140461 -171489689 - HERVH LTR ERV1 -4352 3361 3140 * 11147 138 6 34 chr5 28140440 28142369 -171487781 - HERVH LTR ERV1 -4718 2995 1122 1025 164 35 0 chr5 28143300 28143471 -171486679 - AluJo SINE Alu -16 296 120 644 278 49 31 chr5 28143625 28143932 -171486218 + MLT1A1 LTR MaLR 1 353 -12 241 283 28 57 chr5 28143994 28144100 -171486050 - MIR SINE MIR -126 136 34 22 0 0 0 chr5 28144270 28144292 -171485858 + AT_rich Low_complexity Low_complexity 1 22 0 2656 192 39 59 chr5 28144718 28145218 -171484932 - L1MA5A LINE L1 0 6297 5833 1865 56 0 0 chr5 28145218 28145452 -171484698 - L1PA5 LINE L1 0 6154 5921 2656 192 39 59 chr5 28145452 28145821 -171484329 - L1MA5A LINE L1 -464 5833 5458 2268 121 8 5 chr5 28145929 28146300 -171483850 - L1P LINE L1 -3861 2285 1914 * 6494 92 1 4 chr5 28146296 28147210 -171482940 + L1P LINE L1 3758 4668 -1478 7374 42 0 1 chr5 28147210 28148935 -171481215 + L1PA3 LINE L1 4429 6152 -3 637 225 78 75 chr5 28148955 28149329 -171480821 - L1M4 LINE L1 -1387 4759 4385 23 0 0 0 chr5 28149336 28149359 -171480791 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 28149438 28149461 -171480689 + AT_rich Low_complexity Low_complexity 1 23 0 421 324 158 3 chr5 28149758 28150094 -171480056 - L2 LINE L2 -1665 1649 1262 5728 120 5 2 chr5 28150102 28150969 -171479181 - L1PA13 LINE L1 -2 6161 5293 * 6120 185 18 1 chr5 28150959 28152362 -171477788 - L1P4 LINE L1 -645 5523 4102 327 274 16 32 chr5 28152466 28152590 -171477560 + MER110-int LTR ERV1 3297 3418 -1229 * 687 298 44 46 chr5 28152589 28152978 -171477172 + MER110-int LTR ERV1 3978 4365 -282 2573 108 3 0 chr5 28153261 28153613 -171476537 + THE1A LTR MaLR 3 355 0 10805 106 5 23 chr5 28153613 28155203 -171474947 + THE1A-int LTR MaLR 1 1561 -19 2630 91 6 0 chr5 28155205 28155558 -171474592 + THE1A LTR MaLR 1 355 0 1957 143 26 52 chr5 28155925 28156310 -171473840 + THE1C LTR MaLR 1 375 0 341 252 111 22 chr5 28156371 28156506 -171473644 + MER110 LTR ERV1 359 482 -3 180 0 0 0 chr5 28158226 28158246 -171471904 + (CATTT)n Simple_repeat Simple_repeat 4 23 0 282 257 0 0 chr5 28158547 28158621 -171471529 - MER92A LTR ERV1 0 412 339 374 179 155 0 chr5 28158802 28158886 -171471264 - MER92A LTR ERV1 -315 97 1 1183 174 0 5 chr5 28158930 28159131 -171471019 + L1P3 LINE L1 10 209 -6252 2487 132 0 19 chr5 28159136 28159554 -171470596 + L1P3 LINE L1 2297 2706 -3755 22 0 0 0 chr5 28161316 28161338 -171468812 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 28161712 28161733 -171468417 + AT_rich Low_complexity Low_complexity 1 21 0 436 16 33 0 chr5 28162296 28162357 -171467793 + (TA)n Simple_repeat Simple_repeat 1 63 0 22 80 0 0 chr5 28162560 28162610 -171467540 + AT_rich Low_complexity Low_complexity 1 50 0 27 0 0 0 chr5 28163410 28163437 -171466713 + AT_rich Low_complexity Low_complexity 1 27 0 23 78 0 0 chr5 28164155 28164206 -171465944 + AT_rich Low_complexity Low_complexity 1 51 0 2289 67 7 14 chr5 28164712 28165009 -171465141 - AluY SINE Alu -16 295 1 21 0 0 0 chr5 28165441 28165462 -171464688 + AT_rich Low_complexity Low_complexity 1 21 0 1778 177 5 39 chr5 28166392 28166804 -171463346 + L1 LINE L1 4146 4543 -1603 519 322 33 11 chr5 28166914 28167097 -171463053 + MER5A DNA MER1_type 1 187 -2 191 353 49 43 chr5 28167905 28168089 -171462061 + L2 LINE L2 299 483 -2831 181 0 0 65 chr5 28168238 28168269 -171461881 + (GAAA)n Simple_repeat Simple_repeat 2 30 0 304 385 86 20 chr5 28168325 28168823 -171461327 + L2 LINE L2 668 1198 -2116 35 71 0 0 chr5 28170814 28170884 -171459266 + AT_rich Low_complexity Low_complexity 1 70 0 609 149 0 0 chr5 28171193 28171287 -171458863 + AluS SINE Alu 1 94 -218 548 365 180 15 chr5 28171539 28172402 -171457748 + L2 LINE L2 1837 2841 -473 433 270 104 24 chr5 28172885 28173096 -171457054 + L1ME LINE L1 4145 4372 -1774 519 220 0 0 chr5 28173151 28173242 -171456908 + FLAM_A SINE Alu 16 106 -36 360 0 0 0 chr5 28173242 28173282 -171456868 + (TC)n Simple_repeat Simple_repeat 2 41 0 285 68 17 34 chr5 28173281 28173340 -171456810 + (TA)n Simple_repeat Simple_repeat 1 58 0 * 1546 282 50 49 chr5 28173408 28173563 -171456587 + L1ME LINE L1 4466 4619 -1547 2147 53 50 27 chr5 28173563 28173864 -171456286 - AluY SINE Alu -3 308 1 1546 282 50 49 chr5 28173864 28174915 -171455235 + L1ME LINE L1 4619 5662 -504 21 71 0 0 chr5 28177897 28177939 -171452211 + AT_rich Low_complexity Low_complexity 1 42 0 6815 216 48 14 chr5 28178394 28180214 -171449936 - L1 LINE L1 -2114 4992 3111 5899 251 62 54 chr5 28180208 28181248 -171448902 - L1 LINE L1 -3890 3216 2186 * 2402 129 3 6 chr5 28181248 28181613 -171448537 + THE1B LTR MaLR 1 364 0 5899 251 62 54 chr5 28181613 28183098 -171447052 - L1 LINE L1 -4920 2186 10 954 345 106 26 chr5 28184764 28185269 -171444881 + L2 LINE L2 2260 2863 -450 1717 128 37 10 chr5 28185269 28185565 -171444585 - AluSx SINE Alu -8 304 1 954 345 106 26 chr5 28185565 28185870 -171444280 + L2 LINE L2 2863 3142 -171 21 82 0 0 chr5 28186011 28186060 -171444090 + AT_rich Low_complexity Low_complexity 1 49 0 1020 219 85 54 chr5 28187664 28188016 -171442134 - MLT1A1 LTR MaLR 0 365 3 203 152 0 0 chr5 28188208 28188241 -171441909 + A-rich Low_complexity Low_complexity 4 36 0 360 0 0 0 chr5 28188996 28189036 -171441114 + (TA)n Simple_repeat Simple_repeat 2 41 0 207 283 81 20 chr5 28189038 28189137 -171441013 + L2 LINE L2 2529 2633 -681 219 277 182 19 chr5 28189177 28189336 -171440814 - MIR SINE MIR -13 249 65 545 317 102 20 chr5 28189675 28189968 -171440182 + L2 LINE L2 2632 2948 -366 241 318 0 0 chr5 28190157 28190220 -171439930 + L2 LINE L2 3251 3313 0 338 324 28 28 chr5 28191007 28191183 -171438967 - MIR SINE MIR -64 198 23 458 255 137 63 chr5 28192429 28192700 -171437450 - L2 LINE L2 -8 3305 3015 219 291 29 58 chr5 28192924 28193027 -171437123 - L2 LINE L2 -820 2494 2395 234 220 0 0 chr5 28193031 28193090 -171437060 + CT-rich Low_complexity Low_complexity 1 59 0 710 127 35 12 chr5 28193128 28193301 -171436849 + CT-rich Low_complexity Low_complexity 4 180 0 21 0 0 0 chr5 28193376 28193397 -171436753 + AT_rich Low_complexity Low_complexity 1 21 0 631 248 60 41 chr5 28193593 28193961 -171436189 + L1ME3A LINE L1 5276 5650 -520 2010 164 22 27 chr5 28193961 28194327 -171435823 - THE1B LTR MaLR 0 364 1 5443 130 9 2 chr5 28194327 28195128 -171435022 - THE1B-int LTR MaLR 0 1580 775 1004 243 35 52 chr5 28195128 28195474 -171434676 - LTR9 LTR ERV1 0 612 273 686 182 10 76 chr5 28195731 28195929 -171434221 - LTR9-int LTR ERV1 -560 4320 2388 * 5316 173 92 47 chr5 28195927 28196978 -171433172 - LTR9-int LTR ERV1 -5314 2104 1102 360 0 0 0 chr5 28196978 28197018 -171433132 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5316 173 92 47 chr5 28197018 28197059 -171433091 - LTR9-int LTR ERV1 -6316 1102 1064 188 261 109 0 chr5 28197059 28197151 -171432999 + MER5C DNA MER1_type 1 102 -222 5316 173 92 47 chr5 28197151 28197848 -171432302 - LTR9-int LTR ERV1 -6354 1064 749 1295 228 14 24 chr5 28197866 28198160 -171431990 - LTR9-int LTR ERV1 -6884 534 244 316 206 59 0 chr5 28198153 28198221 -171431929 - LTR9-int LTR ERV1 -7322 96 25 * 1381 263 36 80 chr5 28198255 28198895 -171431255 - LTR9 LTR ERV1 0 612 1 5094 132 14 3 chr5 28198895 28199664 -171430486 - THE1-int LTR MaLR -799 781 1 1912 150 33 19 chr5 28199664 28200023 -171430127 - THE1B LTR MaLR 0 364 1 356 326 81 8 chr5 28200035 28200271 -171429879 + L1ME3A LINE L1 5658 5910 -260 251 326 33 49 chr5 28200285 28200469 -171429681 + ERVL LTR ERVL 3318 3498 -2266 1689 169 31 41 chr5 28200550 28200941 -171429209 - MLT1B LTR MaLR -3 387 1 258 32 0 0 chr5 28201565 28201596 -171428554 + (TA)n Simple_repeat Simple_repeat 2 32 0 510 281 79 6 chr5 28202069 28202247 -171427903 + L1 LINE L1 2585 2775 -3371 8223 116 23 8 chr5 28202248 28203595 -171426555 - L1P LINE L1 -2388 3758 2392 3863 88 26 27 chr5 28203740 28204323 -171425827 + L1PA7 LINE L1 5565 6146 -8 5092 249 20 17 chr5 28204330 28205902 -171424248 + L1 LINE L1 2752 4327 -1819 1593 202 16 3 chr5 28205902 28206219 -171423931 + L1PA16 LINE L1 5829 6149 -17 232 286 157 0 chr5 28206253 28206393 -171423757 - L1M4 LINE L1 -2591 3555 3394 384 346 39 0 chr5 28206558 28206685 -171423465 - MIR3 SINE MIR -12 196 65 21 57 0 0 chr5 28207036 28207071 -171423079 + AT_rich Low_complexity Low_complexity 1 35 0 1933 157 34 10 chr5 28207537 28208052 -171422098 - MLT2A2 LTR ERVL 0 554 1 628 264 140 13 chr5 28208419 28208654 -171421496 - MER45C DNA AcHobo -1 952 688 256 0 0 71 chr5 28209174 28209216 -171420934 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1215 269 82 65 chr5 28210591 28211149 -171419001 + MLT1E LTR MaLR 7 574 -19 272 179 18 0 chr5 28211844 28211900 -171418250 - FAM SINE Alu -7 172 116 2115 164 37 28 chr5 28211900 28212445 -171417705 + MLT2A2 LTR ERVL 1 554 0 1231 182 12 43 chr5 28212445 28212698 -171417452 - AluJo SINE Alu -67 245 1 1866 193 20 11 chr5 28214057 28214415 -171415735 - MLT1A1 LTR MaLR -4 361 1 334 279 130 19 chr5 28214565 28214726 -171415424 - MIR SINE MIR -6 256 78 55 40 0 0 chr5 28214917 28214993 -171415157 + AT_rich Low_complexity Low_complexity 1 76 0 1038 229 67 80 chr5 28216865 28217240 -171412910 - MLT1A2 LTR MaLR 0 374 5 25 51 0 0 chr5 28217773 28217812 -171412338 + AT_rich Low_complexity Low_complexity 1 39 0 288 116 0 0 chr5 28218469 28218512 -171411638 + MADE1 DNA Mariner 38 80 0 4231 221 29 50 chr5 28218512 28218995 -171411155 + L1MC3 LINE L1 6409 6901 -884 183 80 0 0 chr5 28218995 28219020 -171411130 + (CA)n Simple_repeat Simple_repeat 2 26 0 4231 221 29 50 chr5 28219020 28219750 -171410400 + L1MC3 LINE L1 6901 7596 -189 1891 139 147 21 chr5 28219765 28220145 -171410005 + MSTA LTR MaLR 1 428 0 304 287 65 70 chr5 28220367 28220597 -171409553 - Charlie8 DNA MER1_type -2153 264 36 2814 184 114 10 chr5 28222120 28222725 -171407425 - L1PA16 LINE L1 -4 6162 5495 3019 276 29 41 chr5 28222726 28224375 -171405775 + L1PA12 LINE L1 2828 4459 -3125 612 183 30 18 chr5 28224546 28224715 -171405435 + L1MC3 LINE L1 7613 7783 -2 3309 153 50 31 chr5 28225136 28225816 -171404334 - L1MA7 LINE L1 -5 6286 5594 378 121 0 0 chr5 28226349 28226415 -171403735 + (TC)n Simple_repeat Simple_repeat 1 66 0 4963 226 28 20 chr5 28227273 28228638 -171401512 + L1 LINE L1 4616 5991 -1593 747 164 105 33 chr5 28228641 28228793 -171401357 - THE1B LTR MaLR 0 364 202 363 313 90 30 chr5 28228795 28228961 -171401189 + MLT1C LTR MaLR 292 467 0 771 262 183 37 chr5 28229360 28229742 -171400408 + MLT1D LTR MaLR 68 505 0 206 292 14 14 chr5 28231627 28231699 -171398451 + (TA)n Simple_repeat Simple_repeat 2 73 0 229 389 48 31 chr5 28231745 28231974 -171398176 - L2 LINE L2 -149 3164 2932 2983 221 40 47 chr5 28232044 28232560 -171397590 - L1MB8 LINE L1 -12 6166 5648 1474 184 52 52 chr5 28232560 28232924 -171397226 - THE1B LTR MaLR 0 364 1 2983 221 40 47 chr5 28232924 28233609 -171396541 - L1MB8 LINE L1 -530 5648 4972 1999 101 22 4 chr5 28233609 28233886 -171396264 - AluSx SINE Alu -23 289 8 2983 221 40 47 chr5 28233886 28234011 -171396139 - L1MB8 LINE L1 -1206 4972 4848 1076 257 96 43 chr5 28234022 28234461 -171395689 + L1M4 LINE L1 -252 209 -6071 1708 234 56 63 chr5 28234491 28235081 -171395069 + L1M4 LINE L1 281 866 -5414 1451 222 63 122 chr5 28235076 28235447 -171394703 + L1M4 LINE L1 1160 1551 -4833 * 2095 83 0 21 chr5 28235447 28235735 -171394415 + AluSx SINE Alu 1 282 -30 340 98 0 0 chr5 28235735 28235786 -171394364 + Alu SINE Alu 250 300 0 1451 222 63 122 chr5 28235786 28236189 -171393961 + L1M4 LINE L1 1549 1903 -4481 230 169 85 0 chr5 28236211 28236270 -171393880 + L1M4 LINE L1 2025 2088 -4296 391 229 90 0 chr5 28236363 28236485 -171393665 + L1MB7 LINE L1 5800 5932 -242 * 683 243 28 0 chr5 28236484 28236665 -171393485 - L1M4 LINE L1 -3377 3580 3395 4780 258 49 55 chr5 28236666 28237213 -171392937 - L1M4 LINE L1 -5215 1644 1095 180 0 0 0 chr5 28237213 28237233 -171392917 + (TC)n Simple_repeat Simple_repeat 1 20 0 4780 258 49 55 chr5 28237233 28237407 -171392743 - L1M4 LINE L1 -5764 1095 921 480 61 0 0 chr5 28237407 28237473 -171392677 - L1PA6 LINE L1 -3 6151 6086 4780 258 49 55 chr5 28237473 28238372 -171391778 - L1M4 LINE L1 -5938 921 33 317 211 0 0 chr5 28238883 28238940 -171391210 + L1P4 LINE L1 1 57 -6730 3861 97 20 46 chr5 28238940 28239546 -171390604 - LTR14B LTR ERVK 0 608 19 17571 220 28 8 chr5 28239553 28240283 -171389867 + L1P4 LINE L1 66 780 -6039 332 43 22 0 chr5 28240283 28240329 -171389821 + (TG)n Simple_repeat Simple_repeat 1 47 0 17571 220 28 8 chr5 28240329 28245576 -171384574 + L1P4 LINE L1 780 6174 -645 5728 120 5 2 chr5 28245566 28246433 -171383717 + L1PA13 LINE L1 5293 6161 -2 * 428 321 158 3 chr5 28246441 28246777 -171383373 + L2 LINE L2 1262 1649 -1665 23 0 0 0 chr5 28247074 28247097 -171383053 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 28247176 28247199 -171382951 + AT_rich Low_complexity Low_complexity 1 23 0 655 224 77 77 chr5 28247206 28247581 -171382569 + L1ME2 LINE L1 4385 4759 -1387 7481 36 0 0 chr5 28247601 28249047 -171381103 - L1PA3 LINE L1 -3 6152 4707 1299 7 0 0 chr5 28249047 28249195 -171380955 + L1PA3 LINE L1 4554 4701 -1445 474 283 102 44 chr5 28249191 28249672 -171380478 + L1ME2 LINE L1 4747 5255 -891 * 556 297 128 23 chr5 28249722 28250150 -171380000 + L1ME2 LINE L1 5329 5801 -363 240 35 0 0 chr5 28250188 28250217 -171379933 + (TG)n Simple_repeat Simple_repeat 2 30 0 416 211 13 122 chr5 28250384 28250540 -171379610 + L1MA9 LINE L1 6153 6291 0 713 242 86 17 chr5 28250546 28250853 -171379297 + L1ME2 LINE L1 5815 6145 -19 237 232 0 18 chr5 28251297 28251353 -171378797 + (TG)n Simple_repeat Simple_repeat 2 56 0 1669 100 155 7 chr5 28253896 28254167 -171375983 - AluSx SINE Alu -1 311 1 2128 143 0 0 chr5 28254308 28254615 -171375535 + AluSx SINE Alu 1 307 -5 697 236 67 84 chr5 28255416 28255700 -171374450 - MER21B LTR ERV1 -93 770 492 21 57 0 0 chr5 28255921 28255956 -171374194 + AT_rich Low_complexity Low_complexity 1 35 0 27 49 0 0 chr5 28256852 28256893 -171373257 + AT_rich Low_complexity Low_complexity 1 41 0 981 284 48 44 chr5 28257600 28258058 -171372092 - L1ME1 LINE L1 -3 6163 5704 1552 106 38 4 chr5 28258217 28258454 -171371696 - AluSx SINE Alu -16 296 52 412 263 168 36 chr5 28258457 28258731 -171371419 - L1ME1 LINE L1 -841 5305 4996 279 287 41 107 chr5 28258825 28259142 -171371008 + MLT1F1-int LTR MaLR 1076 1371 0 1926 267 30 25 chr5 28259149 28259707 -171370443 + MLT1F1 LTR MaLR 7 567 0 21 36 0 0 chr5 28259969 28259997 -171370153 + AT_rich Low_complexity Low_complexity 1 28 0 1360 117 5 0 chr5 28260280 28260497 -171369653 + AluSg/x SINE Alu 86 303 0 252 268 236 16 chr5 28261302 28261425 -171368725 - MIR SINE MIR -100 162 13 38 39 0 0 chr5 28261585 28261637 -171368513 + AT_rich Low_complexity Low_complexity 1 52 0 2263 61 3 10 chr5 28262346 28262639 -171367511 - AluY SINE Alu -4 307 17 25 51 0 0 chr5 28262760 28262799 -171367351 + AT_rich Low_complexity Low_complexity 1 39 0 27 29 0 0 chr5 28262836 28262870 -171367280 + AT_rich Low_complexity Low_complexity 1 34 0 24 32 0 0 chr5 28263247 28263278 -171366872 + AT_rich Low_complexity Low_complexity 1 31 0 958 231 0 42 chr5 28265243 28265507 -171364643 - L1MD1 LINE L1 -217 6025 5773 189 0 0 0 chr5 28266731 28266752 -171363398 + (TC)n Simple_repeat Simple_repeat 2 22 0 234 91 0 0 chr5 28266753 28266786 -171363364 + (TATG)n Simple_repeat Simple_repeat 2 34 0 189 276 103 52 chr5 28266810 28266926 -171363224 + L2 LINE L2 1311 1432 -1882 713 331 39 16 chr5 28267152 28267460 -171362690 + LTR16A1 LTR ERVL 143 457 0 2053 125 0 0 chr5 28270732 28271013 -171359137 + AluSg SINE Alu 14 294 -16 32 43 0 0 chr5 28272378 28272424 -171357726 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr5 28272588 28272611 -171357539 + AT_rich Low_complexity Low_complexity 1 23 0 331 304 77 43 chr5 28273383 28273760 -171356390 + L1MEd LINE L1 988 1435 -4875 2503 48 0 0 chr5 28273760 28274055 -171356095 + AluY SINE Alu 1 295 -16 331 304 77 43 chr5 28274055 28274186 -171355964 + L1MEd LINE L1 1435 1560 -4750 251 195 24 24 chr5 28274628 28274710 -171355440 + (TCTA)n Simple_repeat Simple_repeat 2 83 0 516 272 143 0 chr5 28275033 28275180 -171354970 + MIR SINE MIR 2 169 -93 23 33 0 0 chr5 28276113 28276143 -171354007 + AT_rich Low_complexity Low_complexity 1 30 0 288 228 43 33 chr5 28276827 28276919 -171353231 + MER5A DNA MER1_type 4 96 -93 23 33 0 0 chr5 28278108 28278138 -171352012 + AT_rich Low_complexity Low_complexity 1 30 0 27 29 0 0 chr5 28279295 28279329 -171350821 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr5 28279534 28279563 -171350587 + AT_rich Low_complexity Low_complexity 1 29 0 248 371 21 10 chr5 28280580 28280677 -171349473 + MER91A DNA MER1_type 14 111 -85 2345 85 13 3 chr5 28281512 28281819 -171348331 - AluSg SINE Alu 0 310 1 1075 163 15 0 chr5 28282013 28282209 -171347941 + L1MB1 LINE L1 5970 6168 0 31 26 0 0 chr5 28282299 28282337 -171347813 + AT_rich Low_complexity Low_complexity 1 38 0 230 300 12 0 chr5 28282829 28282909 -171347241 - MER103 DNA DNA -55 111 31 2493 204 63 87 chr5 28283004 28283725 -171346425 - L1MB8 LINE L1 -6 6172 5474 5307 16 13 3 chr5 28283725 28284358 -171345792 - L1PA2 LINE L1 -1 6154 5516 2493 204 63 87 chr5 28284358 28284521 -171345629 - L1MB8 LINE L1 -704 5474 5309 717 185 6 25 chr5 28284541 28284703 -171345447 - L1MB3 LINE L1 -3 6180 6022 6950 174 75 114 chr5 28284706 28284946 -171345204 - L1M4c LINE L1 -4222 2162 1914 798 163 0 15 chr5 28284946 28285081 -171345069 + FLAM_C SINE Alu 1 133 0 6950 174 75 114 chr5 28285081 28286118 -171344032 - L1M4c LINE L1 -4470 1914 867 692 156 52 22 chr5 28286118 28286253 -171343897 - AluJb SINE Alu -173 139 1 6950 174 75 114 chr5 28286253 28287070 -171343080 - L1M4c LINE L1 -5517 867 20 1199 255 24 14 chr5 28288071 28288440 -171341710 + L1MB8 LINE L1 5746 6118 -60 1687 162 73 20 chr5 28288501 28288602 -171341548 - L1MA8 LINE L1 -5 6286 6192 258 81 0 0 chr5 28288602 28288639 -171341511 + (TG)n Simple_repeat Simple_repeat 2 38 0 1687 162 73 20 chr5 28288639 28289314 -171340836 - L1MA8 LINE L1 -99 6192 5377 807 189 37 98 chr5 28289497 28289741 -171340409 - MLT1-int LTR MaLR -723 648 420 281 228 0 0 chr5 28290004 28290061 -171340089 + HERVL68 LTR ERVL 2724 2780 -257 2704 19 0 0 chr5 28290314 28290623 -171339527 + AluYa5 SINE Alu 1 309 -2 253 410 6 6 chr5 28290709 28290870 -171339280 - L2 LINE L2 -557 2757 2597 1515 134 0 0 chr5 28291422 28291638 -171338512 - AluSg/x SINE Alu -13 297 82 27 49 0 0 chr5 28291880 28291921 -171338229 + AT_rich Low_complexity Low_complexity 1 41 0 983 251 43 0 chr5 28292455 28292734 -171337416 - MER63 DNA MER1_type -11 1049 759 1656 174 10 84 chr5 28292751 28293154 -171336996 + MLT1B LTR MaLR 1 373 -17 2279 174 20 3 chr5 28293155 28293545 -171336605 - MSTA LTR MaLR 0 428 32 387 237 61 18 chr5 28293584 28293698 -171336452 - MER63 DNA MER1_type -317 745 1 1508 206 44 12 chr5 28293920 28294260 -171335890 - L1MA4 LINE L1 -21 6279 5929 1329 188 51 8 chr5 28294260 28294516 -171335634 + L1M1 LINE L1 5504 5770 -530 2575 33 3 0 chr5 28294522 28294825 -171335325 - AluY SINE Alu -7 304 1 1061 347 71 40 chr5 28295899 28296853 -171333297 + L2 LINE L2 2308 3300 -13 202 349 65 61 chr5 28297159 28297388 -171332762 - MIR SINE MIR -9 253 24 194 81 27 0 chr5 28297646 28297683 -171332467 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 303 283 22 0 chr5 28298456 28298548 -171331602 + L1M LINE L1 5295 5388 -774 555 220 86 42 chr5 28298697 28299006 -171331144 + L1ME3A LINE L1 5133 5459 -743 282 200 47 24 chr5 28299032 28299117 -171331033 + L1ME3A LINE L1 5411 5497 -667 263 247 58 11 chr5 28299139 28299253 -171330897 + L1ME3A LINE L1 5481 5599 -565 3189 66 50 2 chr5 28299399 28299823 -171330327 - MLT2A1 LTR ERVL 0 444 1 27126 96 14 3 chr5 28299823 28305429 -171324721 - HERVL-A1 LTR ERVL 0 5654 1 2698 145 40 36 chr5 28305429 28305946 -171324204 - MLT2A1 LTR ERVL 0 515 1 603 269 83 27 chr5 28305993 28306157 -171323993 + L1ME3A LINE L1 5775 5928 -242 1661 241 23 43 chr5 28306157 28306672 -171323478 - MLT1D LTR MaLR 0 505 1 603 269 83 27 chr5 28306672 28306808 -171323342 + L1ME3A LINE L1 5928 6092 -78 284 287 0 0 chr5 28307524 28307611 -171322539 + (TA)n Simple_repeat Simple_repeat 1 87 0 338 318 48 26 chr5 28309717 28309906 -171320244 - MIR SINE MIR 0 262 70 26 0 0 0 chr5 28310382 28310408 -171319742 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr5 28310922 28310954 -171319196 + AT_rich Low_complexity Low_complexity 1 32 0 327 334 125 26 chr5 28310994 28311305 -171318845 + L1ME3A LINE L1 4759 5100 -1046 1043 205 19 0 chr5 28311423 28311628 -171318522 - MER2 DNA MER2_type -136 209 1 917 241 62 120 chr5 28311789 28312405 -171317745 + L1ME3A LINE L1 5261 5826 -344 1841 148 140 8 chr5 28312405 28312783 -171317367 - MSTA LTR MaLR 0 428 1 917 241 62 120 chr5 28312783 28313057 -171317093 + L1ME3A LINE L1 5826 6114 -56 32 42 0 42 chr5 28313062 28313134 -171317016 + AT_rich Low_complexity Low_complexity 1 69 0 11456 137 15 19 chr5 28313404 28315288 -171314862 + L1P LINE L1 11 1886 -4260 299 313 13 20 chr5 28315654 28315804 -171314346 + MERVL LTR ERVL 5185 5333 -152 478 319 99 45 chr5 28316050 28316363 -171313787 + LTR33 LTR ERVL 60 389 -132 708 186 88 44 chr5 28317692 28317896 -171312254 + LTR7 LTR ERV1 238 450 0 561 269 57 26 chr5 28318682 28318875 -171311275 + MIR SINE MIR 18 216 -46 246 284 37 0 chr5 28318987 28319096 -171311054 + (TA)n Simple_repeat Simple_repeat 2 114 0 837 261 63 66 chr5 28319185 28319242 -171310908 - MER92A LTR ERV1 0 412 356 1968 150 51 23 chr5 28319242 28319596 -171310554 - THE1B LTR MaLR 0 364 1 10986 111 10 6 chr5 28319596 28321169 -171308981 - THE1B-int LTR MaLR 0 1580 1 2101 145 48 20 chr5 28321171 28321523 -171308627 - THE1B LTR MaLR -2 362 1 837 261 63 66 chr5 28321523 28321871 -171308279 - MER92A LTR ERV1 -56 356 4 24 0 0 0 chr5 28322138 28322162 -171307988 + AT_rich Low_complexity Low_complexity 1 24 0 209 222 0 0 chr5 28322469 28322514 -171307636 + (TA)n Simple_repeat Simple_repeat 1 45 0 200 228 18 0 chr5 28322909 28322966 -171307184 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 296 188 14 0 chr5 28323357 28323426 -171306724 + (TA)n Simple_repeat Simple_repeat 2 71 0 1551 204 127 32 chr5 28323426 28323858 -171306292 - MLT2B2 LTR ERVL -40 475 3 23 0 0 0 chr5 28323979 28324002 -171306148 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 28324555 28324579 -171305571 + AT_rich Low_complexity Low_complexity 1 24 0 239 325 0 8 chr5 28324710 28324827 -171305323 + (TA)n Simple_repeat Simple_repeat 2 117 0 317 320 0 0 chr5 28325774 28325877 -171304273 + MER103 DNA DNA 3 105 -61 23 0 0 0 chr5 28326080 28326103 -171304047 + AT_rich Low_complexity Low_complexity 1 23 0 582 236 5 46 chr5 28326120 28326315 -171303835 - L1MC3 LINE L1 -1 7784 7598 410 192 0 0 chr5 28326356 28326434 -171303716 - L1MC3 LINE L1 -923 6862 6785 189 0 0 0 chr5 28326488 28326509 -171303641 + (A)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr5 28327301 28327329 -171302821 + AT_rich Low_complexity Low_complexity 1 28 0 376 235 25 17 chr5 28327707 28327826 -171302324 - L1MA10 LINE L1 -2 6332 6213 1389 186 28 28 chr5 28327847 28328057 -171302093 - MLT1B LTR MaLR 0 390 178 2804 105 84 0 chr5 28328057 28328475 -171301675 - MLT2A2 LTR ERVL 0 453 1 1389 186 28 28 chr5 28328475 28328555 -171301595 - MLT1B LTR MaLR -211 179 100 1735 117 0 0 chr5 28328573 28328813 -171301337 - AluSg/x SINE Alu 0 312 73 333 67 0 22 chr5 28328813 28328858 -171301292 + AluS SINE Alu 23 66 -236 293 148 22 237 chr5 28328851 28328923 -171301227 - MLT1B LTR MaLR -284 106 75 * 1977 124 3 16 chr5 28328923 28329229 -171300921 + AluSq SINE Alu 1 302 -11 293 148 22 237 chr5 28329229 28329291 -171300859 - MLT1B LTR MaLR -315 75 1 1722 246 107 17 chr5 28329322 28330259 -171299891 - L1ME1 LINE L1 -161 6005 4991 5357 8 2 0 chr5 28330269 28330893 -171299257 + L1PA2 LINE L1 5544 6168 0 6398 230 50 7 chr5 28331577 28334538 -171295612 + L1PA13 LINE L1 1 3148 -3649 358 254 196 33 chr5 28335828 28336134 -171294016 - MLT1E LTR MaLR 0 542 101 1823 243 67 2 chr5 28337160 28337650 -171292500 + L1M4 LINE L1 3623 4144 -2002 2567 200 6 30 chr5 28337667 28338161 -171291989 + MLT2B3 LTR ERVL 47 528 -26 2570 237 66 23 chr5 28338169 28339042 -171291108 + L1M4 LINE L1 4174 5084 -1062 189 0 0 0 chr5 28339564 28339585 -171290565 + (GA)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr5 28339591 28339612 -171290538 + AT_rich Low_complexity Low_complexity 1 21 0 1547 119 0 0 chr5 28340173 28340391 -171289759 + AluSx SINE Alu 1 218 -94 1920 144 6 16 chr5 28341288 28341600 -171288550 + AluSc SINE Alu 1 309 0 1965 141 0 3 chr5 28341613 28341897 -171288253 + AluSx SINE Alu 4 286 -26 276 245 49 10 chr5 28341945 28342047 -171288103 - L1ME4a LINE L1 -60 6061 5956 4935 106 91 120 chr5 28342100 28342115 -171288035 - pTR5 LTR ERV1 0 2438 2424 762 94 51 0 chr5 28342115 28342232 -171287918 - L1PA15 LINE L1 -4 6161 6039 4935 106 91 120 chr5 28342232 28343812 -171286338 - pTR5 LTR ERV1 -14 2424 136 2078 120 19 0 chr5 28343812 28344128 -171286022 - L1PA15 LINE L1 -121 6044 5723 24 0 0 0 chr5 28344904 28344928 -171285222 + AT_rich Low_complexity Low_complexity 1 24 0 4758 252 45 17 chr5 28346069 28348285 -171281865 - L1MB8 LINE L1 -2 6176 3860 3771 211 107 106 chr5 28348287 28350037 -171280113 + MER52A LTR ERV1 1 1751 -4 1280 251 44 32 chr5 28350043 28350540 -171279610 - L1MB8 LINE L1 -2299 3847 3345 32 86 0 0 chr5 28350561 28350642 -171279508 + AT_rich Low_complexity Low_complexity 1 81 0 230 307 33 43 chr5 28350684 28350987 -171279163 - L1M4 LINE L1 -2260 3886 3587 247 158 0 0 chr5 28351358 28351396 -171278754 - L1 LINE L1 -2475 3671 3634 22 35 0 0 chr5 28351554 28351583 -171278567 + AT_rich Low_complexity Low_complexity 1 29 0 1427 58 0 0 chr5 28351930 28352104 -171278046 - AluY SINE Alu 0 311 138 2006 298 100 22 chr5 28353051 28353962 -171276188 + L2 LINE L2 1716 2697 -617 2065 172 3 0 chr5 28353962 28354299 -171275851 - MER6A DNA MER2_type -267 338 1 1031 172 113 0 chr5 28354299 28354502 -171275648 - L1MC2 LINE L1 -421 5923 5698 498 380 22 47 chr5 28354509 28354833 -171275317 + L2 LINE L2 2722 3038 -275 434 360 66 4 chr5 28355472 28355714 -171274436 + MIR SINE MIR 5 261 -1 238 156 0 0 chr5 28355721 28355770 -171274380 - MLT2B2 LTR ERVL 0 464 424 251 232 0 0 chr5 28355784 28355840 -171274310 + (TA)n Simple_repeat Simple_repeat 2 57 0 201 121 0 0 chr5 28355852 28355885 -171274265 + (TG)n Simple_repeat Simple_repeat 2 34 0 378 0 0 0 chr5 28355885 28355927 -171274223 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 1605 193 145 22 chr5 28355927 28356327 -171273823 - MLT2B2 LTR ERVL -66 449 1 28 29 0 0 chr5 28356857 28356892 -171273258 + AT_rich Low_complexity Low_complexity 1 35 0 295 100 0 0 chr5 28357629 28357679 -171272471 - L1PA4 LINE L1 0 6155 6106 214 257 38 19 chr5 28358570 28358675 -171271475 + (TATG)n Simple_repeat Simple_repeat 2 108 0 2239 116 3 0 chr5 28359015 28359326 -171270824 - AluSx SINE Alu 0 312 1 239 300 14 14 chr5 28359549 28359619 -171270531 - L2 LINE L2 0 3272 3203 23 33 0 0 chr5 28360438 28360468 -171269682 + AT_rich Low_complexity Low_complexity 1 30 0 25 75 0 0 chr5 28360569 28360622 -171269528 + AT_rich Low_complexity Low_complexity 1 53 0 2123 136 16 35 chr5 28361126 28361495 -171268655 + THE1B LTR MaLR 3 364 0 29 0 0 0 chr5 28361931 28361960 -171268190 + AT_rich Low_complexity Low_complexity 1 29 0 1647 100 11 38 chr5 28362267 28362528 -171267622 + AluY SINE Alu 44 297 -14 619 229 0 0 chr5 28362528 28362650 -171267500 - AluJo/FLAM SINE Alu -190 122 1 899 256 5 19 chr5 28363136 28363347 -171266803 - MER58A DNA MER1_type -16 208 1 589 256 176 24 chr5 28364098 28364438 -171265712 + MSTD LTR MaLR 1 392 -4 946 229 30 120 chr5 28364800 28365201 -171264949 + MLT1A1 LTR MaLR 1 365 0 25 75 0 0 chr5 28365726 28365779 -171264371 + AT_rich Low_complexity Low_complexity 1 53 0 24 32 0 0 chr5 28366861 28366892 -171263258 + AT_rich Low_complexity Low_complexity 1 31 0 219 235 143 31 chr5 28367651 28367749 -171262401 - L2 LINE L2 -1 3271 3163 388 91 30 0 chr5 28419348 28419414 -171210736 + CT-rich Low_complexity Low_complexity 3 70 0 244 246 16 0 chr5 28419650 28419711 -171210439 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 27 49 0 0 chr5 28419960 28420001 -171210149 + AT_rich Low_complexity Low_complexity 1 41 0 265 347 38 20 chr5 28420606 28420774 -171209376 + MIR SINE MIR 42 212 -50 263 339 0 11 chr5 28420819 28420996 -171209154 + (CATA)n Simple_repeat Simple_repeat 2 176 0 2066 154 5 29 chr5 28421260 28421642 -171208508 - THE1C LTR MaLR -2 373 1 710 273 27 36 chr5 28421926 28422256 -171207894 - HAL1b LINE L1 -805 543 217 21 36 0 0 chr5 28422270 28422298 -171207852 + AT_rich Low_complexity Low_complexity 1 28 0 210 71 0 0 chr5 28422378 28422406 -171207744 + (TC)n Simple_repeat Simple_repeat 2 29 0 29 28 0 0 chr5 28423022 28423058 -171207092 + AT_rich Low_complexity Low_complexity 1 36 0 228 211 0 0 chr5 28423351 28423389 -171206761 + polypurine Low_complexity Low_complexity 2 39 0 882 118 31 9 chr5 28423389 28423618 -171206532 + GA-rich Low_complexity Low_complexity 1 233 0 22 0 0 0 chr5 28423983 28424005 -171206145 + AT_rich Low_complexity Low_complexity 1 22 0 581 213 7 29 chr5 28424780 28424916 -171205234 - AluJo SINE Alu -114 198 66 318 312 145 17 chr5 28425038 28425198 -171204952 - L1ME3A LINE L1 -274 5896 5695 1436 206 21 14 chr5 28425198 28425489 -171204661 - AluJo SINE Alu -19 293 1 318 312 145 17 chr5 28425489 28425562 -171204588 - L1ME3A LINE L1 -475 5695 5633 341 121 84 108 chr5 28426409 28426492 -171203658 - MER51D LTR ERV1 -77 580 500 689 268 69 90 chr5 28427239 28427524 -171202626 + L1MC4a LINE L1 6616 6906 -1055 2075 131 0 20 chr5 28427524 28427830 -171202320 + AluSg SINE Alu 1 300 -10 689 268 69 90 chr5 28427830 28428175 -171201975 + L1MC4a LINE L1 6906 7238 -723 512 287 84 43 chr5 28428318 28428712 -171201438 + L1MC5 LINE L1 7277 7686 -275 180 301 75 32 chr5 28429662 28429755 -171200395 + L2 LINE L2 3203 3299 -14 304 169 15 0 chr5 28430389 28430454 -171199696 - MER116 DNA Mariner -1 79 14 26 74 0 0 chr5 28430981 28431035 -171199115 + AT_rich Low_complexity Low_complexity 1 54 0 27 0 0 0 chr5 28431290 28431317 -171198833 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr5 28431941 28431966 -171198184 + AT_rich Low_complexity Low_complexity 1 25 0 300 286 86 51 chr5 28432356 28432590 -171197560 - HAL1 LINE L1 -1 2506 2265 1397 143 0 9 chr5 28432741 28432951 -171197199 - AluSx SINE Alu -66 246 39 1819 142 0 11 chr5 28433680 28433954 -171196196 + AluSx SINE Alu 1 271 -41 205 167 42 0 chr5 28433962 28434010 -171196140 + T-rich Low_complexity Low_complexity 2 51 0 1252 176 51 62 chr5 28434733 28435112 -171195038 - MER67C LTR ERV1 -242 272 1 3119 227 68 58 chr5 28435365 28435737 -171194413 - L1MD1 LINE L1 0 6636 6269 2272 97 0 13 chr5 28435737 28436048 -171194102 - AluSc SINE Alu -2 307 1 3119 227 68 58 chr5 28436048 28437339 -171192811 - L1MD1 LINE L1 -367 6269 4946 1789 177 36 33 chr5 28437348 28437401 -171192749 + MLT1B LTR MaLR 1 52 -338 2393 107 19 16 chr5 28437401 28437764 -171192386 + THE1B LTR MaLR 1 364 0 1789 177 36 33 chr5 28437764 28438099 -171192051 + MLT1B LTR MaLR 52 390 0 3553 255 90 57 chr5 28438104 28438549 -171191601 - L1MD1 LINE L1 -1607 4933 4504 654 12 0 24 chr5 28438549 28438633 -171191517 + L1PA6 LINE L1 6070 6151 -3 3553 255 90 57 chr5 28438633 28439154 -171190996 - L1MD1 LINE L1 -2036 4504 4002 1956 100 3 91 chr5 28439154 28439483 -171190667 + AluSp SINE Alu 4 303 -10 3553 255 90 57 chr5 28439483 28439944 -171190206 - L1MD1 LINE L1 -2538 4002 3558 881 166 39 34 chr5 28439944 28440149 -171190001 - L1MA3 LINE L1 -2 6303 6098 3553 255 90 57 chr5 28440149 28441250 -171188900 - L1MD1 LINE L1 -2982 3558 2326 291 154 40 20 chr5 28441251 28441400 -171188750 + (TA)n Simple_repeat Simple_repeat 1 152 0 201 126 28 70 chr5 28441378 28441521 -171188629 + (TTATA)n Simple_repeat Simple_repeat 3 139 0 * 27 92 0 0 chr5 28441522 28441598 -171188552 + AT_rich Low_complexity Low_complexity 1 76 0 244 162 40 75 chr5 28441599 28441772 -171188378 + (TATAA)n Simple_repeat Simple_repeat 3 169 0 312 222 27 54 chr5 28441972 28442157 -171187993 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 808 230 86 3 chr5 28442157 28442461 -171187689 - L1MD1 LINE L1 -4203 2337 2009 24 77 0 0 chr5 28442694 28442746 -171187404 + AT_rich Low_complexity Low_complexity 1 52 0 501 378 95 17 chr5 28442836 28443257 -171186893 + L2 LINE L2 2225 2678 -636 183 42 0 0 chr5 28443346 28443370 -171186780 + (TC)n Simple_repeat Simple_repeat 2 25 0 642 283 147 12 chr5 28443383 28443797 -171186353 - MER69 DNA AcHobo -19 2507 2038 * 767 324 54 4 chr5 28443795 28444073 -171186077 - MER69 DNA AcHobo -584 642 351 1181 238 5 68 chr5 28444952 28445322 -171184828 + MLT2C1 LTR ERVL 3 349 -48 210 203 0 51 chr5 28445322 28445381 -171184769 + (TCTCTG)n Simple_repeat Simple_repeat 4 59 0 1045 270 109 55 chr5 28445445 28446067 -171184083 - L1MC4 LINE L1 -143 7899 7244 689 222 30 15 chr5 28446071 28446269 -171183881 - L1MC4 LINE L1 -952 7090 6890 686 214 12 18 chr5 28446372 28446540 -171183610 - L1MB8 LINE L1 -6 6172 6006 230 164 0 49 chr5 28446547 28446608 -171183542 - L1MB8 LINE L1 -506 5668 5611 1209 194 24 10 chr5 28446631 28446919 -171183231 + L1MB8 LINE L1 5611 5902 -276 1679 161 37 7 chr5 28446920 28447338 -171182812 + L1M2 LINE L1 5148 5574 -717 6614 65 1 1 chr5 28447384 28448873 -171181277 - L1PA5 LINE L1 0 6154 4690 1659 70 0 0 chr5 28448873 28449088 -171181062 + L1PA5 LINE L1 4445 4659 -1487 469 302 37 55 chr5 28449263 28449652 -171180498 + ERVL LTR ERVL 1940 2365 -2864 302 326 36 7 chr5 28449906 28450044 -171180106 + ERVL LTR ERVL 2692 2833 -2163 350 380 62 7 chr5 28450207 28450657 -171179493 + ERVL LTR ERVL 3068 3542 -2112 262 267 50 0 chr5 28451552 28451653 -171178497 - HAL1b LINE L1 -257 1091 986 1221 131 0 6 chr5 28451773 28451949 -171178201 - AluSg/x SINE Alu -49 261 87 370 116 43 43 chr5 28451950 28452019 -171178131 + AluS SINE Alu 9 77 -226 796 59 37 15 chr5 28452084 28452220 -171177930 + (GAAA)n Simple_repeat Simple_repeat 2 140 0 631 301 86 46 chr5 28452359 28452857 -171177293 - HAL1b LINE L1 -741 607 90 1841 135 0 0 chr5 28453258 28453583 -171176567 + AluSx SINE Alu 3 327 0 190 54 27 27 chr5 28453583 28453620 -171176530 + (TA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr5 28454987 28455008 -171175142 + AT_rich Low_complexity Low_complexity 1 21 0 2131 86 0 0 chr5 28456213 28456520 -171173630 + AluY SINE Alu 1 281 -30 2219 229 10 22 chr5 28456703 28457209 -171172941 - LTR31 LTR ERV1 -16 603 104 23 33 0 0 chr5 28457615 28457645 -171172505 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 28458066 28458099 -171172051 + AT_rich Low_complexity Low_complexity 1 33 0 842 234 12 6 chr5 28458208 28458379 -171171771 + MER45A DNA AcHobo 7 178 0 1384 208 0 41 chr5 28459421 28459750 -171170400 + AluJo SINE Alu 1 317 0 340 354 67 67 chr5 28460009 28460532 -171169618 + L2 LINE L2 2452 2974 -340 1329 137 19 5 chr5 28461092 28461297 -171168853 - AluSg/x SINE Alu -14 298 91 769 176 0 8 chr5 28461311 28461442 -171168708 - FLAM_C SINE Alu -3 130 1 710 191 66 0 chr5 28461929 28462081 -171168069 - MLT1A1 LTR MaLR 0 365 204 1195 159 0 0 chr5 28462213 28462395 -171167755 - AluSg/x SINE Alu -13 299 118 866 200 34 11 chr5 28462427 28462602 -171167548 - MLT1A1 LTR MaLR -183 182 4 1921 163 0 7 chr5 28462804 28463110 -171167040 - AluSx SINE Alu -8 304 1 815 278 163 47 chr5 28463433 28463980 -171166170 - MLT1E2 LTR MaLR 0 654 5 227 306 25 25 chr5 28464608 28464729 -171165421 - MLT1J LTR MaLR -161 350 230 2507 266 45 44 chr5 28466546 28467627 -171162523 + L1MEc LINE L1 1973 3051 -3164 2116 112 10 3 chr5 28467627 28467932 -171162218 + AluSx SINE Alu 1 307 -5 2507 266 45 44 chr5 28467932 28468243 -171161907 + L1MEc LINE L1 3051 3317 -2898 2256 145 67 12 chr5 28468243 28468649 -171161501 + MSTA LTR MaLR 1 428 0 2507 266 45 44 chr5 28468649 28468665 -171161485 + L1MEc LINE L1 3317 3331 -2884 345 296 45 126 chr5 28468885 28469392 -171160758 + L1MC4 LINE L1 7545 8010 -32 785 289 101 50 chr5 28470216 28470673 -171159477 + MLT1F1 LTR MaLR 80 559 -8 23 54 0 0 chr5 28471450 28471487 -171158663 + AT_rich Low_complexity Low_complexity 1 37 0 206 255 0 0 chr5 28471777 28471828 -171158322 + (TTA)n Simple_repeat Simple_repeat 1 51 0 21 0 0 0 chr5 28473581 28473602 -171156548 + AT_rich Low_complexity Low_complexity 1 21 0 6552 99 62 12 chr5 28473639 28473975 -171156175 - L1PA8A LINE L1 -314 5817 5499 2139 114 0 3 chr5 28473975 28474273 -171155877 - AluSg1 SINE Alu -12 297 1 6552 99 62 12 chr5 28474273 28475465 -171154685 - L1PA8A LINE L1 -632 5499 4206 304 163 0 0 chr5 28475465 28475514 -171154636 + MLT1B LTR MaLR 336 384 -6 592 271 68 51 chr5 28475522 28475814 -171154336 + MLT2C1 LTR ERVL 1 297 -100 309 89 0 0 chr5 28475820 28475865 -171154285 + (TC)n Simple_repeat Simple_repeat 2 46 0 363 152 0 0 chr5 28475866 28475945 -171154205 + (CA)n Simple_repeat Simple_repeat 1 79 0 693 208 59 25 chr5 28475999 28476201 -171153949 - L1MD3 LINE L1 0 7995 7787 904 239 77 68 chr5 28476231 28476728 -171153422 - MLT1D LTR MaLR -4 501 1 21 36 0 0 chr5 28477187 28477215 -171152935 + AT_rich Low_complexity Low_complexity 1 28 0 621 136 58 12 chr5 28477927 28478170 -171151980 + CT-rich Low_complexity Low_complexity 1 254 0 2213 100 7 0 chr5 28478646 28478936 -171151214 + AluSc SINE Alu 1 292 -17 22 56 0 0 chr5 28480032 28480068 -171150082 + AT_rich Low_complexity Low_complexity 1 36 0 1247 219 64 3 chr5 28480389 28480672 -171149478 - AluJo SINE Alu -2 300 1 22 56 0 0 chr5 28480794 28480830 -171149320 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr5 28481305 28481333 -171148817 + AT_rich Low_complexity Low_complexity 1 28 0 445 285 6 0 chr5 28481608 28481727 -171148423 + MIR SINE MIR 39 161 -47 234 300 167 24 chr5 28482271 28482481 -171147669 - L1M4 LINE L1 -1224 4922 4683 277 122 0 0 chr5 28482571 28482612 -171147538 + U2 snRNA snRNA 1 41 -147 2097 153 34 39 chr5 28482636 28483075 -171147075 + LTR56 LTR ERV1 9 445 0 1001 259 60 34 chr5 28483097 28483500 -171146650 - L1M4 LINE L1 -1627 4519 4101 1492 212 76 27 chr5 28483500 28483910 -171146240 + MER57B LTR ERV1 5 434 0 1001 259 60 34 chr5 28483910 28483954 -171146196 - L1M4 LINE L1 -2045 4101 4060 4724 92 36 0 chr5 28487078 28487775 -171142375 + LTR30 LTR ERV1 1 722 0 729 325 90 36 chr5 28488034 28488567 -171141583 + ERVL LTR ERVL 2669 3230 -2534 220 317 19 29 chr5 28489162 28489266 -171140884 + L2 LINE L2 2145 2247 -1067 * 233 376 24 57 chr5 28489256 28489588 -171140562 - L2 LINE L2 -1191 2123 1803 187 393 36 0 chr5 28490695 28490807 -171139343 + L2 LINE L2 1896 2011 -1303 191 278 0 0 chr5 28490944 28490980 -171139170 + L2 LINE L2 3267 3302 -11 347 304 84 31 chr5 28491031 28491258 -171138892 + L2 LINE L2 3075 3313 0 1988 123 13 13 chr5 28492086 28492396 -171137754 + AluSx SINE Alu 1 310 -2 231 274 157 32 chr5 28492725 28492973 -171137177 + HAL1b LINE L1 95 373 -975 983 274 87 19 chr5 28493035 28493404 -171136746 - L1ME3A LINE L1 -328 5842 5449 274 333 56 5 chr5 28493468 28493681 -171136469 + L1M4 LINE L1 5164 5387 -759 23 0 0 0 chr5 28493842 28493865 -171136285 + AT_rich Low_complexity Low_complexity 1 23 0 2318 121 0 50 chr5 28493865 28494075 -171136075 - L1MA2 LINE L1 -7 6297 6078 2372 55 0 0 chr5 28494075 28494364 -171135786 - AluY SINE Alu -17 294 6 207 0 0 0 chr5 28494368 28494391 -171135759 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1871 98 8 0 chr5 28494394 28494639 -171135511 - AluSc SINE Alu -32 277 31 2318 121 0 50 chr5 28494639 28494823 -171135327 - L1MA2 LINE L1 -231 6073 5914 237 315 68 93 chr5 28494825 28495149 -171135001 - L1MEd LINE L1 -5596 523 208 39 50 0 0 chr5 28497323 28497383 -171132767 + AT_rich Low_complexity Low_complexity 1 60 0 237 320 54 54 chr5 28499070 28499217 -171130933 + MER5A DNA MER1_type 36 182 -7 2261 97 0 0 chr5 28500421 28500720 -171129430 - AluY SINE Alu -12 299 1 1785 170 75 154 chr5 28501583 28502373 -171127777 + LTR8A LTR ERV1 1 727 0 189 0 0 0 chr5 28503489 28503510 -171126640 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 2198 82 7 0 chr5 28503510 28503790 -171126360 - AluY SINE Alu -29 282 1 890 287 37 6 chr5 28505305 28505653 -171124497 + L1M4 LINE L1 3703 4061 -2085 2653 236 85 6 chr5 28505675 28506819 -171123331 + L1M4 LINE L1 4384 5618 -566 1156 206 61 8 chr5 28506819 28507081 -171123069 + MLT1A1 LTR MaLR 1 276 -89 1075 36 0 29 chr5 28507084 28507224 -171122926 + L1PA10 LINE L1 6031 6166 -2 997 201 16 39 chr5 28507375 28507629 -171122521 + L1PA16 LINE L1 4481 4728 -1418 3990 179 16 30 chr5 28507632 28508462 -171121688 + L1PA16 LINE L1 5312 6129 -37 275 216 46 26 chr5 28508462 28508615 -171121535 + (TTATA)n Simple_repeat Simple_repeat 4 159 0 * 391 209 45 40 chr5 28508599 28508776 -171121374 + (TA)n Simple_repeat Simple_repeat 2 179 0 421 186 36 25 chr5 28508805 28509132 -171121018 + (TA)n Simple_repeat Simple_repeat 1 330 0 24 85 0 0 chr5 28509186 28509245 -171120905 + AT_rich Low_complexity Low_complexity 1 59 0 356 209 33 44 chr5 28509245 28509498 -171120652 + (TA)n Simple_repeat Simple_repeat 1 250 0 244 198 31 62 chr5 28509478 28509640 -171120510 + (TTATA)n Simple_repeat Simple_repeat 5 161 0 * 324 192 45 13 chr5 28509673 28509829 -171120321 + (TA)n Simple_repeat Simple_repeat 1 161 0 23 86 0 0 chr5 28509935 28509993 -171120157 + AT_rich Low_complexity Low_complexity 1 58 0 389 276 248 5 chr5 28510126 28510336 -171119814 - MLT1E1 LTR MaLR -391 263 3 225 218 92 23 chr5 28510498 28510585 -171119565 - L1ME3A LINE L1 -134 6036 5944 973 176 22 39 chr5 28510889 28511071 -171119079 + MER30 DNA MER1_type 52 230 0 629 245 65 43 chr5 28511071 28511341 -171118809 + MER52A LTR ERV1 1 380 -1375 24 91 0 0 chr5 28511395 28511461 -171118689 + AT_rich Low_complexity Low_complexity 1 66 0 429 36 0 0 chr5 28511737 28511792 -171118358 + (TG)n Simple_repeat Simple_repeat 2 56 0 1902 138 16 13 chr5 28512119 28512430 -171117720 + AluSq SINE Alu 1 312 -1 22 0 0 0 chr5 28513439 28513461 -171116689 + AT_rich Low_complexity Low_complexity 1 22 0 307 282 12 0 chr5 28514429 28514514 -171115636 + MIR SINE MIR 83 168 -94 23 54 0 0 chr5 28514577 28514614 -171115536 + AT_rich Low_complexity Low_complexity 1 37 0 548 226 8 8 chr5 28514802 28514935 -171115215 - MLT1A1 LTR MaLR 0 365 233 256 132 0 179 chr5 28514963 28515069 -171115081 + LTR38B LTR ERV1 27 113 -497 967 215 137 41 chr5 28515160 28515596 -171114554 + LTR38B LTR ERV1 92 556 0 867 220 49 31 chr5 28515596 28515819 -171114331 - MLT1A1 LTR MaLR -129 236 10 2505 310 21 18 chr5 28516420 28517350 -171112800 - ERVL LTR ERVL -2350 3414 2482 28 0 0 0 chr5 28517357 28517385 -171112765 + AT_rich Low_complexity Low_complexity 1 28 0 3620 60 0 11 chr5 28517395 28517861 -171112289 - L1PA7 LINE L1 -11 6143 5683 460 119 0 0 chr5 28517861 28517928 -171112222 + L1PA7 LINE L1 5631 5697 -457 1829 327 41 6 chr5 28517956 28518835 -171111315 - ERVL LTR ERVL -3238 2438 1477 493 314 29 5 chr5 28519005 28519212 -171110938 - ERVL LTR ERVL -4448 1316 1105 322 368 14 0 chr5 28519744 28519888 -171110262 - ERVL LTR ERVL -5154 610 465 423 295 20 13 chr5 28520065 28520214 -171109936 - MLT2F LTR ERVL -513 150 1 306 294 28 55 chr5 28520316 28520425 -171109725 - L1M4 LINE L1 -2688 3458 3353 648 251 43 21 chr5 28520442 28520629 -171109521 + MER20 DNA MER1_type 29 219 0 186 43 0 0 chr5 28521127 28521150 -171109000 + (A)n Simple_repeat Simple_repeat 1 23 0 70 92 0 0 chr5 28521252 28521448 -171108702 + AT_rich Low_complexity Low_complexity 1 196 0 186 422 37 18 chr5 28521509 28521618 -171108532 - MER5A DNA MER1_type 0 189 79 247 335 64 37 chr5 28521886 28522074 -171108076 - MLT1I LTR MaLR -17 392 200 23 0 0 0 chr5 28523490 28523513 -171106637 + AT_rich Low_complexity Low_complexity 1 23 0 48 0 0 0 chr5 28523530 28523578 -171106572 + AT_rich Low_complexity Low_complexity 1 48 0 1735 154 159 16 chr5 28524393 28524757 -171105393 - MSTA LTR MaLR -12 416 1 1714 86 0 21 chr5 28525159 28525393 -171104757 - AluSp SINE Alu -2 311 83 23 33 0 0 chr5 28525750 28525780 -171104370 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 28526478 28526500 -171103650 + AT_rich Low_complexity Low_complexity 1 22 0 223 300 0 109 chr5 28527156 28527230 -171102920 - L2 LINE L2 -19 3253 3193 1969 159 0 7 chr5 28527230 28527532 -171102618 + AluSx SINE Alu 1 300 -12 223 300 0 109 chr5 28527532 28527567 -171102583 - L2 LINE L2 -79 3193 3156 11370 218 25 20 chr5 28528400 28534330 -171095820 - L1PA16 LINE L1 0 6869 899 21 0 0 0 chr5 28534636 28534657 -171095493 + AT_rich Low_complexity Low_complexity 1 21 0 1974 130 9 13 chr5 28535425 28535740 -171094410 + L1PB4 LINE L1 5830 6143 -13 247 314 58 22 chr5 28535746 28535883 -171094267 + MIR SINE MIR 57 198 -64 940 294 95 24 chr5 28536793 28537851 -171092299 - L1ME3 LINE L1 -50 6112 4921 21 0 0 0 chr5 28537955 28537976 -171092174 + AT_rich Low_complexity Low_complexity 1 21 0 1619 214 58 16 chr5 28538435 28538800 -171091350 + MLT1B LTR MaLR 1 380 -10 245 256 47 12 chr5 28540447 28540533 -171089617 - MLT1I LTR MaLR -17 392 304 29 28 0 0 chr5 28540907 28540943 -171089207 + AT_rich Low_complexity Low_complexity 1 36 0 868 249 40 20 chr5 28541200 28541449 -171088701 + MLT1E1 LTR MaLR 6 259 -395 690 285 34 28 chr5 28541910 28542264 -171087886 - L1ME3 LINE L1 -2197 3949 3594 216 0 0 0 chr5 28542594 28542618 -171087532 + (TA)n Simple_repeat Simple_repeat 2 25 0 318 26 0 0 chr5 28542645 28542684 -171087466 + (CA)n Simple_repeat Simple_repeat 2 40 0 729 191 50 0 chr5 28542707 28542848 -171087302 + Tigger2 DNA MER2_type 4 151 -2567 4074 149 3 46 chr5 28542858 28543601 -171086549 + Tigger2 DNA MER2_type 330 1040 -1678 2004 113 3 0 chr5 28543601 28543909 -171086241 - AluSp SINE Alu 0 309 1 3981 158 72 3 chr5 28543927 28544634 -171085516 + Tigger2 DNA MER2_type 1963 2718 0 309 198 0 0 chr5 28544634 28544720 -171085430 + (TA)n Simple_repeat Simple_repeat 1 86 0 226 303 0 0 chr5 28544733 28544822 -171085328 - L1MC4 LINE L1 -1339 6703 6615 801 195 11 63 chr5 28544936 28545126 -171085024 - MLT2B1 LTR ERVL -264 256 77 773 224 0 0 chr5 28545149 28545292 -171084858 - ERVL LTR ERVL -1022 4742 4600 1433 224 53 28 chr5 28545302 28545663 -171084487 - MLT1A2 LTR MaLR 0 374 5 1467 204 3 19 chr5 28545725 28546039 -171084111 - AluJo SINE Alu -3 309 1 21 36 0 0 chr5 28546076 28546104 -171084046 + AT_rich Low_complexity Low_complexity 1 28 0 32 0 0 0 chr5 28546475 28546507 -171083643 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 28546901 28546922 -171083228 + AT_rich Low_complexity Low_complexity 1 21 0 1954 137 0 4 chr5 28547109 28547447 -171082703 - AluSg SINE Alu 0 341 5 1934 165 0 0 chr5 28547450 28547747 -171082403 - AluSx SINE Alu -15 297 1 485 221 12 86 chr5 28547828 28547991 -171082159 + LTR52 LTR ERVL 1 151 -270 236 127 91 18 chr5 28547992 28548047 -171082103 + L1M4 LINE L1 3651 3709 -2437 1852 148 80 14 chr5 28548050 28548402 -171081748 + THE1C LTR MaLR 1 375 0 1977 148 51 24 chr5 28548405 28548737 -171081413 - THE1B LTR MaLR -8 356 16 11191 112 3 0 chr5 28548744 28550319 -171079831 - THE1B-int LTR MaLR 0 1580 1 1945 138 63 20 chr5 28550319 28550666 -171079484 - THE1B LTR MaLR 0 364 3 5897 182 26 94 chr5 28550674 28552301 -171077849 + L1M2 LINE L1 3708 5164 -1127 263 71 24 0 chr5 28552301 28552343 -171077807 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 5897 182 26 94 chr5 28552343 28552723 -171077427 + L1M2 LINE L1 5164 5568 -723 2494 57 3 0 chr5 28552724 28553042 -171077108 + L1P LINE L1 3455 3773 -2373 208 221 0 44 chr5 28654902 28654970 -170975180 + (TATG)n Simple_repeat Simple_repeat 4 68 0 235 138 35 17 chr5 28655084 28655142 -170975008 + (TA)n Simple_repeat Simple_repeat 1 59 0 273 59 0 0 chr5 28655201 28655235 -170974915 - U2 snRNA snRNA -154 34 1 1908 99 24 24 chr5 28655406 28655700 -170974450 + AluSx SINE Alu 1 294 -18 185 91 0 30 chr5 28655749 28655782 -170974368 + (CGGGA)n Simple_repeat Simple_repeat 2 33 0 225 274 0 0 chr5 28656245 28656296 -170973854 + GA-rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr5 28656390 28656411 -170973739 + AT_rich Low_complexity Low_complexity 1 21 0 749 226 62 4 chr5 28656878 28657221 -170972929 - MLT1D LTR MaLR 0 505 115 327 137 0 0 chr5 28657223 28657274 -170972876 - MADE1 DNA Mariner 0 80 30 280 288 0 0 chr5 28657302 28657368 -170972782 - MLT1D LTR MaLR -439 66 1 4992 201 51 59 chr5 28657404 28659107 -170971043 + L1MC1 LINE L1 4634 6324 -9 285 242 11 55 chr5 28659167 28659258 -170970892 - Tigger5 DNA MER2_type 0 2323 2237 1568 267 29 27 chr5 28659409 28659889 -170970261 - LTR38 LTR ERV1 -11 545 65 375 376 12 32 chr5 28660370 28660620 -170969530 - LTR38-int LTR ERV1 -257 6865 6621 258 196 59 0 chr5 28660614 28660665 -170969485 - PABL_B-int LTR ERV1 -5090 2032 1979 * 469 284 84 47 chr5 28660772 28661131 -170969019 + LTR15 LTR ERV1 104 475 -18 1566 180 40 42 chr5 28661141 28661815 -170968335 - MER49 LTR ERV1 -212 711 1 578 132 5 36 chr5 28661819 28662006 -170968144 - LTR38-int LTR ERV1 -1023 7097 6829 681 237 43 0 chr5 28662024 28662163 -170967987 - LTR38-int LTR ERV1 -608 6150 6006 288 184 78 136 chr5 28662473 28662576 -170967574 - LTR38-int LTR ERV1 -4240 3880 3784 740 201 146 18 chr5 28662773 28663148 -170967002 - LTR38-int LTR ERV1 -4513 2245 1663 2022 100 0 0 chr5 28663152 28663411 -170966739 - AluSc SINE Alu -20 289 31 5802 187 50 33 chr5 28663411 28663838 -170966312 - LTR38-int LTR ERV1 -7 1779 1361 3307 53 2 0 chr5 28663838 28664249 -170965901 + L1PA5 LINE L1 5740 6151 -3 5802 187 50 33 chr5 28664249 28665311 -170964839 - LTR38-int LTR ERV1 -425 1361 284 551 140 119 0 chr5 28665521 28665664 -170964486 - AluYa8 SINE Alu -150 160 1 325 323 128 5 chr5 28665779 28665974 -170964176 - MLT1J LTR MaLR -2 509 291 40 59 0 0 chr5 28666149 28666217 -170963933 + AT_rich Low_complexity Low_complexity 1 68 0 182 37 37 0 chr5 28666606 28666633 -170963517 + (TC)n Simple_repeat Simple_repeat 1 28 0 342 115 0 0 chr5 28666836 28666888 -170963262 + (TG)n Simple_repeat Simple_repeat 1 52 0 2209 148 11 0 chr5 28667066 28667443 -170962707 - L1PA13 LINE L1 0 6163 5783 856 251 103 14 chr5 28668336 28668627 -170961523 + L1ME LINE L1 4034 4350 -1796 1434 247 106 39 chr5 28668675 28669421 -170960729 + L1ME LINE L1 4931 5720 -446 1600 189 0 11 chr5 28669427 28669708 -170960442 - AluJb SINE Alu -34 278 1 839 55 0 0 chr5 28669999 28670108 -170960042 - L1PA4 LINE L1 0 6155 6047 479 17 17 0 chr5 28670867 28670927 -170959223 + (CA)n Simple_repeat Simple_repeat 1 61 0 1193 284 113 21 chr5 28671158 28671768 -170958382 - L2 LINE L2 -499 2815 2150 25 75 0 0 chr5 28671891 28671944 -170958206 + AT_rich Low_complexity Low_complexity 1 53 0 192 344 169 31 chr5 28672030 28672190 -170957960 - MIR3 SINE MIR -15 193 12 22 70 0 0 chr5 28672476 28672519 -170957631 + AT_rich Low_complexity Low_complexity 1 43 0 459 0 0 0 chr5 28673042 28673093 -170957057 + (CA)n Simple_repeat Simple_repeat 2 52 0 1539 198 0 3 chr5 28673201 28673484 -170956666 + AluJb SINE Alu 1 282 -30 338 214 12 24 chr5 28673551 28673635 -170956515 - L1MB1 LINE L1 -55 6134 6052 * 906 115 33 123 chr5 28673630 28673874 -170956276 + L1MA10 LINE L1 6111 6332 -2 21 0 0 0 chr5 28674255 28674276 -170955874 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 28675091 28675121 -170955029 + AT_rich Low_complexity Low_complexity 1 30 0 426 136 25 74 chr5 28676852 28676933 -170953217 - LTR38-int LTR ERV1 -1708 78 2 1558 285 45 24 chr5 28676947 28677480 -170952670 - LTR38 LTR ERV1 -12 544 1 315 253 40 53 chr5 28677539 28677689 -170952461 - L1M4 LINE L1 -3096 3050 2903 368 323 154 18 chr5 28677803 28678140 -170952010 + L1M4 LINE L1 4683 5065 -1081 2226 77 40 7 chr5 28680395 28680695 -170949455 + AluY SINE Alu 1 310 -1 6265 126 23 29 chr5 28681090 28682167 -170947983 - MER11C LTR ERVK 0 1071 1 355 242 42 0 chr5 28682266 28682361 -170947789 - L1MA10 LINE L1 -11 6323 6225 2428 63 0 0 chr5 28682610 28682909 -170947241 + AluY SINE Alu 1 299 -12 301 334 52 83 chr5 28682977 28683384 -170946766 - L1MB1 LINE L1 -2005 5803 5410 393 353 56 24 chr5 28683448 28683697 -170946453 + L2 LINE L2 3056 3312 -1 23 78 0 0 chr5 28686015 28686066 -170944084 + AT_rich Low_complexity Low_complexity 1 51 0 283 286 20 0 chr5 28686677 28686819 -170943331 + (TA)n Simple_repeat Simple_repeat 1 144 0 22 0 0 0 chr5 28688293 28688315 -170941835 + AT_rich Low_complexity Low_complexity 1 22 0 2400 36 0 0 chr5 28688887 28689204 -170940946 - AluY SINE Alu 0 317 1 24 0 0 0 chr5 28689400 28689424 -170940726 + AT_rich Low_complexity Low_complexity 1 24 0 445 284 119 37 chr5 28689571 28689898 -170940252 - L1MDa LINE L1 -2792 3423 3070 1505 210 35 35 chr5 28689899 28690270 -170939880 + MLT1A2 LTR MaLR 4 374 0 351 263 45 8 chr5 28690299 28690432 -170939718 - L1MDa LINE L1 -3147 3068 2931 277 336 105 0 chr5 28690582 28690811 -170939339 - L1MDa LINE L1 -3783 2432 2180 2324 66 10 7 chr5 28690940 28691241 -170938909 + AluY SINE Alu 1 302 -9 301 300 67 45 chr5 28691552 28692146 -170938004 - L1MDa LINE L1 -4571 1644 1072 21 0 0 0 chr5 28693621 28693642 -170936508 + AT_rich Low_complexity Low_complexity 1 21 0 2175 56 11 3 chr5 28693648 28693933 -170936217 + AluY SINE Alu 1 287 -24 564 29 0 0 chr5 28693936 28694006 -170936144 + (TAAAA)n Simple_repeat Simple_repeat 2 71 0 2323 38 14 3 chr5 28694343 28694634 -170935516 + AluY SINE Alu 1 294 -17 255 331 76 7 chr5 28695001 28695146 -170935004 - MER67D LTR ERV1 -4 510 356 1239 211 70 29 chr5 28695153 28695465 -170934685 - MER67C LTR ERV1 -307 403 79 927 245 7 114 chr5 28695481 28695894 -170934256 + MLT2B1 LTR ERVL 99 467 -53 24 96 0 0 chr5 28696192 28696265 -170933885 + AT_rich Low_complexity Low_complexity 1 73 0 189 147 0 0 chr5 28696581 28696615 -170933535 + (CA)n Simple_repeat Simple_repeat 2 35 0 350 267 23 12 chr5 28697248 28697420 -170932730 + (TA)n Simple_repeat Simple_repeat 2 175 0 1782 188 53 8 chr5 28697427 28697784 -170932366 - MLT2D LTR ERVL -40 374 2 968 232 42 83 chr5 28698157 28698952 -170931198 - MER4C LTR ERV1 0 471 1 40 0 0 0 chr5 28699011 28699051 -170931099 + AT_rich Low_complexity Low_complexity 1 40 0 1109 192 0 33 chr5 28700108 28700348 -170929802 - AluJb SINE Alu -3 309 78 223 184 20 51 chr5 28700593 28700691 -170929459 + (TA)n Simple_repeat Simple_repeat 2 96 0 24 32 0 0 chr5 28701402 28701433 -170928717 + AT_rich Low_complexity Low_complexity 1 31 0 192 97 0 0 chr5 28701544 28701575 -170928575 + (TG)n Simple_repeat Simple_repeat 2 32 0 811 191 0 0 chr5 28702682 28702829 -170927321 - L1MA6 LINE L1 -1199 4947 4801 2317 177 26 71 chr5 28702830 28702981 -170927169 + L1MA6 LINE L1 4955 5111 -1189 2291 121 0 3 chr5 28702981 28703294 -170926856 - AluSx SINE Alu 0 312 1 2317 177 26 71 chr5 28703294 28704065 -170926085 + L1MA6 LINE L1 5111 5836 -464 5065 177 34 17 chr5 28704090 28705180 -170924970 + L1MA6 LINE L1 5190 6299 -1 425 318 87 0 chr5 28705204 28705377 -170924773 - LTR16A1 LTR ERVL -69 388 201 391 234 88 58 chr5 28705836 28706041 -170924109 + L2 LINE L2 2311 2521 -793 23 78 0 0 chr5 28707811 28707862 -170922288 + AT_rich Low_complexity Low_complexity 1 51 0 34 24 0 0 chr5 28708040 28708081 -170922069 + AT_rich Low_complexity Low_complexity 1 41 0 1498 194 33 14 chr5 28709109 28709474 -170920676 + L1MA6 LINE L1 5918 6289 -11 312 27 0 0 chr5 28709996 28710033 -170920117 + (TG)n Simple_repeat Simple_repeat 1 37 0 813 200 14 81 chr5 28710045 28710255 -170919895 - AluJo SINE Alu -30 282 87 696 86 29 9 chr5 28710400 28710505 -170919645 - L1P4 LINE L1 -523 5645 5539 2457 102 43 0 chr5 28710505 28710863 -170919287 + L1PA10 LINE L1 5779 6168 0 1349 57 6 0 chr5 28711292 28711468 -170918682 - L1PA4 LINE L1 -8 6147 5971 21 57 0 0 chr5 28711964 28711999 -170918151 + AT_rich Low_complexity Low_complexity 1 35 0 241 94 113 19 chr5 28712255 28712308 -170917842 - MLT1I LTR MaLR -26 383 326 1960 144 0 3 chr5 28714238 28714550 -170915600 + AluSq SINE Alu 1 311 0 263 276 28 62 chr5 28714807 28714952 -170915198 + L2 LINE L2 2219 2358 -956 1577 319 70 26 chr5 28715093 28715854 -170914296 + L2 LINE L2 1536 2329 -985 21 0 0 0 chr5 28716018 28716039 -170914111 + AT_rich Low_complexity Low_complexity 1 21 0 27 81 0 0 chr5 28716070 28716132 -170914018 + AT_rich Low_complexity Low_complexity 1 62 0 295 356 23 3 chr5 28716396 28716506 -170913644 - MIR SINE MIR -66 142 30 367 281 56 56 chr5 28716658 28716836 -170913314 + MLT1J LTR MaLR 3 180 -331 647 218 81 6 chr5 28716849 28717022 -170913128 - MSTD LTR MaLR -2 383 175 1469 313 56 25 chr5 28717148 28717832 -170912318 - L2 LINE L2 -976 2338 1634 501 245 83 62 chr5 28718085 28718277 -170911873 - MSTD LTR MaLR -169 196 1 430 321 14 69 chr5 28718282 28718559 -170911591 + MLT1J LTR MaLR 191 452 -59 1903 184 52 33 chr5 28718620 28719161 -170910989 + MLT2A2 LTR ERVL 4 554 0 300 291 0 12 chr5 28720186 28720272 -170909878 - L2 LINE L2 -2 3311 3227 422 295 62 53 chr5 28720895 28721122 -170909028 - MIR SINE MIR 0 262 34 30 0 0 0 chr5 28721241 28721271 -170908879 + AT_rich Low_complexity Low_complexity 1 30 0 1211 114 0 0 chr5 28721419 28721603 -170908547 + L1MA4 LINE L1 6109 6292 -8 2235 193 73 5 chr5 28721770 28722361 -170907789 - L1P LINE L1 -777 5374 4735 4259 96 3 5 chr5 28722361 28722968 -170907182 + L1PB1 LINE L1 5545 6150 -1 26 0 0 0 chr5 28723207 28723233 -170906917 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr5 28723446 28723478 -170906672 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 28724133 28724156 -170905994 + AT_rich Low_complexity Low_complexity 1 23 0 2597 145 14 26 chr5 28724231 28724722 -170905428 - L1MA9 LINE L1 0 6312 5828 198 0 0 0 chr5 28724754 28724776 -170905374 + (TATATG)n Simple_repeat Simple_repeat 3 24 0 1593 175 25 62 chr5 28724786 28725187 -170904963 + L1 LINE L1 4972 5357 -789 1126 194 0 15 chr5 28726037 28726243 -170903907 + MSTA LTR MaLR 1 203 -225 1157 154 37 15 chr5 28726342 28726546 -170903604 + MSTA LTR MaLR 211 418 -10 337 289 22 0 chr5 28728976 28729066 -170901084 + MIR SINE MIR 76 167 -95 26 64 0 0 chr5 28729953 28730000 -170900150 + AT_rich Low_complexity Low_complexity 1 47 0 29 0 0 0 chr5 28732238 28732267 -170897883 + AT_rich Low_complexity Low_complexity 1 29 0 3161 105 29 25 chr5 28732267 28732780 -170897370 - L1MA1 LINE L1 -7 6295 5781 3746 77 8 6 chr5 28732799 28733320 -170896830 + L1MA1 LINE L1 5254 5775 -527 2173 108 0 0 chr5 28733811 28734097 -170896053 + AluSx SINE Alu 1 286 -26 2361 90 3 0 chr5 28737073 28737384 -170892766 - AluSp SINE Alu 0 313 2 251 107 0 71 chr5 28738049 28738105 -170892045 + L1MC4 LINE L1 6652 6703 -1339 416 182 0 20 chr5 28738110 28738209 -170891941 + (CATATA)n Simple_repeat Simple_repeat 3 99 0 2095 115 3 0 chr5 28738274 28738562 -170891588 + AluSx SINE Alu 1 289 -23 30 0 0 0 chr5 28739640 28739670 -170890480 + AT_rich Low_complexity Low_complexity 1 30 0 3936 83 63 3 chr5 28740001 28740569 -170889581 - LTR14B LTR ERVK 0 608 7 379 314 16 43 chr5 28740670 28740858 -170889292 + MLT1I LTR MaLR 44 226 -183 207 0 0 0 chr5 28740978 28741001 -170889149 + (CA)n Simple_repeat Simple_repeat 2 24 0 204 40 0 0 chr5 28742178 28742203 -170887947 + (CA)n Simple_repeat Simple_repeat 2 26 0 1451 191 101 42 chr5 28742387 28742725 -170887425 + MSTB1 LTR MaLR 1 368 -64 1970 110 0 18 chr5 28742725 28743007 -170887143 - AluSc SINE Alu -32 277 1 1451 191 101 42 chr5 28743007 28743076 -170887074 + MSTB1 LTR MaLR 368 432 0 1775 171 0 31 chr5 28744202 28744524 -170885626 + AluJo SINE Alu 1 312 0 461 139 15 36 chr5 28744743 28744880 -170885270 + (TA)n Simple_repeat Simple_repeat 2 135 0 1048 310 115 39 chr5 28744972 28745629 -170884521 - L2 LINE L2 -272 3041 2340 4951 29 5 0 chr5 28746261 28746853 -170883297 - L1PA4 LINE L1 0 6155 5561 186 43 0 0 chr5 28746853 28746876 -170883274 + (CAGAA)n Simple_repeat Simple_repeat 3 25 0 1781 184 34 6 chr5 28746901 28747255 -170882895 - MLT1A1 LTR MaLR -1 364 1 969 323 187 28 chr5 28747255 28748149 -170882001 - L2 LINE L2 -1023 2291 1256 22638 31 4 0 chr5 28748159 28750907 -170879243 - L1P LINE L1 -1739 4407 1649 8839 32 0 0 chr5 28750909 28752736 -170877414 + L1PA3 LINE L1 4324 6150 -5 1471 191 87 48 chr5 28754577 28755104 -170875046 - MER67C LTR ERV1 0 514 1 518 280 0 32 chr5 28755104 28755288 -170874862 + MER3 DNA MER1_type 31 208 -1 256 182 57 0 chr5 28756320 28756408 -170873742 + GA-rich Low_complexity Low_complexity 2 94 0 556 367 31 8 chr5 28756550 28756806 -170873344 + MIR SINE MIR 1 262 0 238 302 66 97 chr5 28756946 28757204 -170872946 + L2 LINE L2 2228 2477 -837 24 53 0 0 chr5 28757874 28757912 -170872238 + AT_rich Low_complexity Low_complexity 1 38 0 29 84 0 0 chr5 28758186 28758257 -170871893 + AT_rich Low_complexity Low_complexity 1 71 0 337 316 68 11 chr5 28759403 28759580 -170870570 - MIR SINE MIR -35 227 41 1547 134 38 4 chr5 28759915 28760154 -170869996 - AluSg SINE Alu -22 288 42 235 302 47 0 chr5 28760321 28760427 -170869723 - L1ME LINE L1 -346 5824 5714 232 296 68 30 chr5 28760435 28760567 -170869583 - L1ME LINE L1 -534 5636 5500 2176 108 0 3 chr5 28760786 28761083 -170869067 + AluSq SINE Alu 1 296 -17 219 139 0 0 chr5 28761083 28761119 -170869031 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr5 28761101 28761122 -170869028 + AT_rich Low_complexity Low_complexity 1 21 0 * 413 149 0 23 chr5 28762091 28762178 -170867972 + (TCCCC)n Simple_repeat Simple_repeat 5 89 0 391 321 49 62 chr5 28762645 28762969 -170867181 + MLT1I LTR MaLR 85 404 -5 2467 63 0 0 chr5 28764429 28764729 -170865421 - AluY SINE Alu -11 300 1 369 345 65 49 chr5 28766154 28766479 -170863671 + L2 LINE L2 2643 2972 -342 21 0 0 0 chr5 28766818 28766839 -170863311 + AT_rich Low_complexity Low_complexity 1 21 0 284 156 44 0 chr5 28768123 28768213 -170861937 + (TA)n Simple_repeat Simple_repeat 1 94 0 1447 202 0 0 chr5 28768213 28768475 -170861675 - AluJb SINE Alu -27 285 24 1115 224 103 4 chr5 28769078 28769350 -170860800 - MLT1E2 LTR MaLR -9 617 319 2311 219 16 14 chr5 28769376 28769878 -170860272 - MER67D LTR ERV1 -2 512 10 543 210 152 5 chr5 28769896 28770106 -170860044 - MLT1E2 LTR MaLR -328 298 73 198 103 0 0 chr5 28771656 28771685 -170858465 + (TCCCC)n Simple_repeat Simple_repeat 3 31 0 833 132 24 6 chr5 28771707 28771874 -170858276 + CT-rich Low_complexity Low_complexity 3 172 0 877 77 33 39 chr5 28771890 28772071 -170858079 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 284 328 29 35 chr5 28772582 28772753 -170857397 - MLT1K LTR MaLR -2 586 417 395 191 76 38 chr5 28772757 28772862 -170857288 - FLAM_A SINE Alu -3 130 22 350 346 65 14 chr5 28772865 28773082 -170857068 - MLT1K LTR MaLR -162 426 199 1942 201 40 81 chr5 28773793 28774371 -170855779 + MLT2B3 LTR ERVL 1 554 0 219 69 0 0 chr5 28776043 28776072 -170854078 + (A)n Simple_repeat Simple_repeat 1 29 0 294 267 38 38 chr5 28776948 28777079 -170853071 + L1MC4 LINE L1 7891 8021 -21 237 291 43 35 chr5 28777692 28777747 -170852403 + HAL1b LINE L1 456 509 -839 2007 147 29 29 chr5 28777747 28778122 -170852028 + THE1C LTR MaLR 1 375 0 237 291 43 35 chr5 28778122 28778207 -170851943 + HAL1b LINE L1 509 597 -751 748 228 89 17 chr5 28778280 28778517 -170851633 + L1MC2 LINE L1 6038 6291 -53 2883 244 29 37 chr5 28778518 28779426 -170850724 + MLT1-int LTR MaLR 258 1127 -244 1017 214 61 36 chr5 28779461 28779901 -170850249 + L1M4 LINE L1 2778 3228 -2918 228 200 0 0 chr5 28781093 28781143 -170849007 + GA-rich Low_complexity Low_complexity 1 50 0 243 0 0 0 chr5 28781905 28781932 -170848218 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1027 273 138 12 chr5 28781941 28782760 -170847390 - L1ME1 LINE L1 -4 6442 5491 532 213 15 7 chr5 28782750 28782886 -170847264 - L1ME1 LINE L1 -2089 4337 4201 * 512 216 72 18 chr5 28782909 28783076 -170847074 + L1MC5 LINE L1 7017 7192 -769 * 1184 162 37 21 chr5 28783072 28783437 -170846713 - L1ME1 LINE L1 -4480 1946 1489 880 236 45 63 chr5 28783455 28783789 -170846361 - L1ME1 LINE L1 -6071 355 28 4674 216 45 1 chr5 28783795 28785062 -170845088 + L1MC2 LINE L1 5016 6335 -9 483 296 17 29 chr5 28785879 28786051 -170844099 - L3 LINE CR1 -772 805 636 229 343 125 33 chr5 28786428 28786795 -170843355 + L2 LINE L2 711 1111 -2203 1559 238 42 27 chr5 28786797 28787247 -170842903 - MLT1C LTR MaLR 0 467 11 2135 129 0 3 chr5 28787656 28788008 -170842142 - AluSg SINE Alu 0 310 1 227 375 47 63 chr5 28788128 28788429 -170841721 + L2 LINE L2 1862 2157 -1157 348 267 47 0 chr5 28788532 28788618 -170841532 - L1MC4 LINE L1 -1339 6703 6614 232 138 69 0 chr5 28788618 28788676 -170841474 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 372 270 0 0 chr5 28788676 28788765 -170841385 + L1MC4 LINE L1 6614 6702 -1340 264 148 0 0 chr5 28788768 28788829 -170841321 + (TA)n Simple_repeat Simple_repeat 2 62 0 346 255 0 43 chr5 28788832 28788926 -170841224 + L1MC4 LINE L1 6614 6703 -1339 314 284 23 0 chr5 28788938 28789026 -170841124 + L1MC4 LINE L1 6614 6703 -1339 993 106 0 0 chr5 28789029 28789209 -170840941 + (TA)n Simple_repeat Simple_repeat 1 180 0 368 271 0 70 chr5 28789218 28789347 -170840803 + L1MC4 LINE L1 6614 6733 -1309 380 37 19 0 chr5 28789422 28789476 -170840674 + (CAAAA)n Simple_repeat Simple_repeat 3 57 0 3344 87 5 143 chr5 28789674 28790339 -170839811 + L1PA7 LINE L1 5330 5902 -253 42127 37 22 1 chr5 28790340 28796365 -170833785 + L1PA2 LINE L1 1 6155 0 2102 48 0 8 chr5 28796518 28796786 -170833364 + L1PA7 LINE L1 5888 6153 -1 21 57 0 0 chr5 28797123 28797158 -170832992 + AT_rich Low_complexity Low_complexity 1 35 0 21 82 0 0 chr5 28797311 28797360 -170832790 + AT_rich Low_complexity Low_complexity 1 49 0 599 285 67 62 chr5 28798960 28799318 -170830832 - L2 LINE L2 -457 2857 2498 1078 143 23 97 chr5 28799321 28799512 -170830638 - Tigger2 DNA MER2_type 0 2718 2549 1760 139 0 73 chr5 28799512 28799828 -170830322 - AluJb SINE Alu -19 293 1 1078 143 23 97 chr5 28799828 28799895 -170830255 - Tigger2 DNA MER2_type -169 2549 2479 553 290 30 71 chr5 28802594 28802863 -170827287 - L2 LINE L2 -1134 2180 1923 23 54 0 0 chr5 28803165 28803202 -170826948 + AT_rich Low_complexity Low_complexity 1 37 0 219 114 0 0 chr5 28804242 28804277 -170825873 + (CA)n Simple_repeat Simple_repeat 2 36 0 183 239 0 0 chr5 28804724 28804770 -170825380 + (TA)n Simple_repeat Simple_repeat 2 47 0 2184 218 29 8 chr5 28805124 28805252 -170824898 + L1MB2 LINE L1 5370 5494 -677 2167 113 0 7 chr5 28805252 28805552 -170824598 + AluSg SINE Alu 1 298 -12 2184 218 29 8 chr5 28805552 28806088 -170824062 + L1MB2 LINE L1 5494 6161 -10 28 71 0 0 chr5 28806743 28806799 -170823351 + AT_rich Low_complexity Low_complexity 1 56 0 201 158 0 0 chr5 28807012 28807050 -170823100 + T-rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr5 28807176 28807199 -170822951 + AT_rich Low_complexity Low_complexity 1 23 0 1997 206 52 82 chr5 28808351 28808982 -170821168 - LTR9 LTR ERV1 0 612 1 2096 109 3 32 chr5 28809362 28809673 -170820477 + AluSq SINE Alu 1 302 -11 647 148 0 8 chr5 28809673 28809795 -170820355 + (GGA)n Simple_repeat Simple_repeat 1 121 0 1122 234 151 34 chr5 28809847 28810265 -170819885 - MLT1C LTR MaLR 0 467 1 2133 118 3 0 chr5 28810654 28810951 -170819199 + AluSx SINE Alu 1 298 -14 301 238 0 38 chr5 28810963 28811043 -170819107 + MIR SINE MIR 186 262 0 301 331 95 25 chr5 28811337 28811579 -170818571 - MLT1H LTR MaLR -5 544 286 1662 219 133 5 chr5 28811975 28812404 -170817746 - MLT1D LTR MaLR -19 486 3 2056 159 82 20 chr5 28813334 28813737 -170816413 + MSTA LTR MaLR 1 428 0 8503 189 16 9 chr5 28813737 28815376 -170814774 + MSTA-int LTR MaLR 1 1651 0 1250 163 262 23 chr5 28815378 28815722 -170814428 + MSTA LTR MaLR 3 428 0 201 175 0 0 chr5 28816235 28816275 -170813875 + (TATG)n Simple_repeat Simple_repeat 4 43 0 27 29 0 0 chr5 28816356 28816390 -170813760 + AT_rich Low_complexity Low_complexity 1 34 0 220 154 62 31 chr5 28816448 28816513 -170813637 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 5047 201 32 7 chr5 28818063 28818630 -170811520 - L1P5 LINE L1 -379 5777 5225 194 0 0 37 chr5 28818630 28818657 -170811493 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 5047 201 32 7 chr5 28818657 28819765 -170810385 - L1P5 LINE L1 -931 5225 4061 28 0 0 0 chr5 28819772 28819800 -170810350 + AT_rich Low_complexity Low_complexity 1 28 0 230 247 13 39 chr5 28820622 28820699 -170809451 + CT-rich Low_complexity Low_complexity 4 78 0 310 252 126 17 chr5 28820783 28820902 -170809248 - L2 LINE L2 -4 3309 3178 24 0 0 0 chr5 28820961 28820985 -170809165 + AT_rich Low_complexity Low_complexity 1 24 0 1772 147 76 17 chr5 28821332 28821686 -170808464 - THE1C LTR MaLR 0 375 1 6560 129 224 43 chr5 28821686 28823024 -170807126 - THE1C-int LTR MaLR 0 1580 1 1852 141 83 3 chr5 28823024 28823351 -170806799 - THE1C LTR MaLR 0 375 23 24 67 0 0 chr5 28823558 28823603 -170806547 + AT_rich Low_complexity Low_complexity 1 45 0 33 25 0 0 chr5 28824373 28824413 -170805737 + AT_rich Low_complexity Low_complexity 1 40 0 2152 116 0 0 chr5 28824861 28825155 -170804995 - AluY SINE Alu -17 294 1 22 0 0 0 chr5 28825208 28825230 -170804920 + AT_rich Low_complexity Low_complexity 1 22 0 1230 249 78 19 chr5 28825635 28826009 -170804141 - MSTD LTR MaLR 0 396 1 5546 264 63 28 chr5 28826009 28827684 -170802466 - MSTD-int LTR MaLR 0 1735 2 1431 275 18 10 chr5 28827686 28828079 -170802071 - MSTD LTR MaLR 0 396 1 721 290 76 37 chr5 28828828 28829156 -170800994 + MER2 DNA MER2_type 2 342 -3 21 0 0 0 chr5 28829403 28829424 -170800726 + AT_rich Low_complexity Low_complexity 1 21 0 203 291 0 0 chr5 28831327 28831382 -170798768 + (TA)n Simple_repeat Simple_repeat 1 55 0 2283 45 52 3 chr5 28831656 28831945 -170798205 - AluY SINE Alu -8 303 1 36 23 0 0 chr5 28832759 28832802 -170797348 + AT_rich Low_complexity Low_complexity 1 43 0 23 78 0 0 chr5 28832949 28833000 -170797150 + AT_rich Low_complexity Low_complexity 1 51 0 234 368 0 0 chr5 28833807 28833883 -170796267 + MIR3 SINE MIR 115 190 -18 1245 75 0 0 chr5 28834121 28834280 -170795870 + ERVL-D LTR ERVL 2425 2583 -3181 222 37 0 0 chr5 28834280 28834307 -170795843 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 7590 22 0 0 chr5 28834307 28835680 -170794470 - L1PA2 LINE L1 -13 6142 4770 7980 38 0 1 chr5 28835680 28836650 -170793500 + L1P LINE L1 3865 4833 -1313 * 19947 37 0 0 chr5 28836640 28839102 -170791048 + L1P LINE L1 1399 3861 -2285 17508 179 22 16 chr5 28839102 28841672 -170788478 + ERVL-D LTR ERVL 2579 5173 -591 2391 106 35 54 chr5 28841672 28842078 -170788072 - MER48 LTR ERV1 0 398 1 17508 179 22 16 chr5 28842078 28842672 -170787478 + ERVL-D LTR ERVL 5173 5762 -2 1235 147 36 9 chr5 28842672 28842793 -170787357 + Ricksha DNA DNA 347 473 -781 1618 185 18 110 chr5 28842859 28843312 -170786838 + MLT2D LTR ERVL 143 553 0 2060 183 21 0 chr5 28843354 28843736 -170786414 + MLT1B LTR MaLR 1 390 0 476 267 80 53 chr5 28844022 28844247 -170785903 - MIR SINE MIR 0 262 32 5539 125 21 42 chr5 28844703 28845669 -170784481 + L1MA2 LINE L1 5353 6297 -7 22 0 0 0 chr5 28845748 28845770 -170784380 + AT_rich Low_complexity Low_complexity 1 22 0 766 293 176 29 chr5 28846687 28847130 -170783020 - HAL1 LINE L1 -4 2503 2127 983 248 94 49 chr5 28847130 28847577 -170782573 - MLT1C LTR MaLR 0 467 1 766 293 176 29 chr5 28847577 28847900 -170782250 - HAL1 LINE L1 -380 2127 1624 1904 194 3 0 chr5 28848181 28848541 -170781609 - L1PB3 LINE L1 -5 6149 5789 227 271 0 0 chr5 28848542 28848590 -170781560 + (TATG)n Simple_repeat Simple_repeat 3 50 0 1878 149 15 11 chr5 28848592 28849012 -170781138 - L1PB3 LINE L1 -376 5778 5262 417 311 259 23 chr5 28849262 28849703 -170780447 - HAL1 LINE L1 -940 1567 1023 1559 177 46 7 chr5 28849728 28850010 -170780140 - AluSx SINE Alu -13 299 7 2577 236 60 27 chr5 28850038 28850704 -170779446 + MER76 LTR ERV 1 688 0 456 282 90 116 chr5 28851506 28852491 -170777659 - L1MEc LINE L1 -4634 1762 803 189 0 0 0 chr5 28853112 28853133 -170777017 + (T)n Simple_repeat Simple_repeat 1 21 0 1844 110 0 8 chr5 28853787 28854050 -170776100 - AluSx SINE Alu -51 261 1 438 337 36 5 chr5 28855203 28855396 -170774754 - MIR SINE MIR -57 205 7 325 316 82 20 chr5 28855399 28855595 -170774555 + HERVL LTR ERVL 2340 2547 -3107 24 0 0 0 chr5 28856191 28856215 -170773935 + AT_rich Low_complexity Low_complexity 1 24 0 3104 245 33 31 chr5 28856757 28857792 -170772358 + L1MB8 LINE L1 4557 5596 -582 1642 175 34 3 chr5 28857792 28858083 -170772067 + AluJb SINE Alu 3 302 -10 3104 245 33 31 chr5 28858083 28858668 -170771482 + L1MB8 LINE L1 5596 6178 0 461 216 164 8 chr5 28859063 28859197 -170770953 - MER77 LTR ERV1 -7 598 444 204 125 0 0 chr5 28859911 28859943 -170770207 + (TA)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr5 28860260 28860281 -170769869 + AT_rich Low_complexity Low_complexity 1 21 0 34 55 0 0 chr5 28860745 28860800 -170769350 + AT_rich Low_complexity Low_complexity 1 55 0 3101 188 26 47 chr5 28861793 28861943 -170768207 - L1MC1 LINE L1 -18 6315 6163 2009 93 0 18 chr5 28861943 28862221 -170767929 - AluSg SINE Alu -3 307 35 3101 188 26 47 chr5 28862221 28862788 -170767362 - L1MC1 LINE L1 -170 6163 5613 267 286 94 72 chr5 28863008 28863284 -170766866 - HAL1 LINE L1 -768 1739 1458 25 51 0 0 chr5 28863287 28863326 -170766824 + AT_rich Low_complexity Low_complexity 1 39 0 2017 234 18 24 chr5 28863377 28863925 -170766225 - L1 LINE L1 -1663 4483 3939 6722 140 25 7 chr5 28863936 28864626 -170765524 - Tigger1 DNA MER2_type -531 1887 1170 1901 144 24 0 chr5 28864626 28864917 -170765233 - AluSx SINE Alu -14 298 1 6722 140 25 7 chr5 28864917 28865303 -170764847 - Tigger1 DNA MER2_type -1248 1170 792 1651 219 38 14 chr5 28865307 28865673 -170764477 - Tigger1 DNA MER2_type -2042 376 2 29 70 0 0 chr5 28865673 28865730 -170764420 + AT_rich Low_complexity Low_complexity 1 57 0 10895 34 1 0 chr5 28865784 28867876 -170762274 - L1PA3 LINE L1 0 6155 4062 25 51 0 0 chr5 28868984 28869023 -170761127 + AT_rich Low_complexity Low_complexity 1 39 0 28 48 0 0 chr5 28870241 28870283 -170759867 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 28871582 28871603 -170758547 + AT_rich Low_complexity Low_complexity 1 21 0 283 315 97 24 chr5 28871617 28871782 -170758368 - L2 LINE L2 -139 3174 2998 2020 155 7 0 chr5 28872545 28872854 -170757296 - AluSx SINE Alu 0 312 2 485 285 7 0 chr5 28873003 28873154 -170756996 + L1PBa LINE L1 3 154 -6709 273 174 0 54 chr5 28873269 28873361 -170756789 + (CATATA)n Simple_repeat Simple_repeat 4 90 0 214 263 26 13 chr5 28873609 28873685 -170756465 + (TTTA)n Simple_repeat Simple_repeat 1 77 0 18247 77 5 1 chr5 28874094 28876515 -170753635 + L1P LINE L1 1 2431 -3715 2177 54 0 4 chr5 28876531 28876809 -170753341 + L1PA5 LINE L1 5878 6154 0 316 202 24 48 chr5 28876834 28876918 -170753232 + L2 LINE L2 3190 3271 -1 405 282 101 7 chr5 28877020 28877169 -170752981 + MIR SINE MIR 4 166 -96 25 0 0 0 chr5 28878134 28878159 -170751991 + AT_rich Low_complexity Low_complexity 1 25 0 28 48 0 0 chr5 28878739 28878781 -170751369 + AT_rich Low_complexity Low_complexity 1 42 0 28 29 0 0 chr5 28879224 28879259 -170750891 + AT_rich Low_complexity Low_complexity 1 35 0 1498 272 76 18 chr5 28879346 28880418 -170749732 - L1ME3 LINE L1 -222 5940 4799 716 252 79 14 chr5 28880439 28880717 -170749433 - L1ME3 LINE L1 -1518 4628 4333 333 337 134 18 chr5 28880823 28881099 -170749051 + L1ME3A LINE L1 5578 5885 -285 729 191 64 12 chr5 28882436 28882609 -170747541 + L1MA9 LINE L1 6131 6312 0 269 286 8 17 chr5 28883690 28883809 -170746341 + (TA)n Simple_repeat Simple_repeat 2 119 0 431 78 16 0 chr5 28883809 28883873 -170746277 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 398 320 20 34 chr5 28883957 28884104 -170746046 - MIR SINE MIR -113 149 5 18842 193 32 12 chr5 28885330 28889683 -170740467 + L1MA3 LINE L1 13 4457 -3108 6368 146 11 19 chr5 28889672 28891131 -170739019 + L1MA3 LINE L1 6281 7723 -1 * 23 68 0 0 chr5 28891391 28891435 -170738715 + AT_rich Low_complexity Low_complexity 1 44 0 5672 79 4 1 chr5 28891439 28892188 -170737962 - L1PA7 LINE L1 -3 6151 5401 1369 251 24 46 chr5 28892725 28893226 -170736924 + MLT1D LTR MaLR 16 505 0 25 83 0 0 chr5 28893361 28893421 -170736729 + AT_rich Low_complexity Low_complexity 1 60 0 24 53 0 0 chr5 28893518 28893556 -170736594 + AT_rich Low_complexity Low_complexity 1 38 0 417 248 39 26 chr5 28893714 28893867 -170736283 - L1ME1 LINE L1 -5 6161 6007 207 69 0 0 chr5 28893945 28893974 -170736176 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr5 28894204 28894234 -170735916 + AT_rich Low_complexity Low_complexity 1 30 0 383 235 30 18 chr5 28894772 28894938 -170735212 + (TA)n Simple_repeat Simple_repeat 2 169 0 218 173 40 40 chr5 28896340 28896415 -170733735 + L2 LINE L2 2831 2905 -367 183 310 123 37 chr5 28897134 28897321 -170732829 + MIR SINE MIR 60 262 0 249 417 11 0 chr5 28897991 28898166 -170731984 + L2 LINE L2 2496 2672 -642 240 111 0 0 chr5 28898189 28898225 -170731925 + (T)n Simple_repeat Simple_repeat 1 36 0 516 178 90 140 chr5 28898225 28898568 -170731582 - LTR7 LTR ERV1 -38 412 87 1324 81 47 8 chr5 28898570 28898804 -170731346 + SVA Other Other 455 697 -689 700 139 0 0 chr5 28898832 28898940 -170731210 + AluSq/x SINE Alu 1 108 -205 228 35 0 0 chr5 28898952 28898981 -170731169 + (CCAA)n Simple_repeat Simple_repeat 1 29 0 202 365 0 0 chr5 28899021 28899095 -170731055 + CT-rich Low_complexity Low_complexity 2 75 0 335 338 132 64 chr5 28899452 28900253 -170729897 + L1 LINE L1 535 1390 -5459 * 348 286 89 125 chr5 28899907 28900738 -170729412 - L1M2 LINE L1 -5442 1407 607 240 178 0 0 chr5 28901514 28901559 -170728591 + SUBTEL_sa Satellite Satellite 117 161 -13 21 57 0 0 chr5 28902968 28903003 -170727147 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr5 28904009 28904044 -170726106 + AT_rich Low_complexity Low_complexity 1 35 0 566 302 23 23 chr5 28904064 28904279 -170725871 - MER20 DNA MER1_type -1 218 4 311 288 70 23 chr5 28904415 28904630 -170725520 + L1 LINE L1 5080 5304 -1544 312 295 39 0 chr5 28904658 28904736 -170725414 + L1MCa LINE L1 2 82 -6777 775 179 90 4 chr5 28904764 28904998 -170725152 + L1MCa LINE L1 2745 2998 -3959 1402 326 5 29 chr5 28904998 28905753 -170724397 + L1M4 LINE L1 3718 4454 -1692 400 331 39 6 chr5 28906086 28906264 -170723886 - HERVL LTR ERVL -1331 4433 4250 470 252 104 56 chr5 28906300 28906604 -170723546 - HERVL LTR ERVL -1337 4148 3831 652 196 85 13 chr5 28906638 28906791 -170723359 + MER20 DNA MER1_type 55 218 -1 2097 157 11 11 chr5 28907542 28907917 -170722233 - THE1C LTR MaLR 0 375 1 26 30 0 0 chr5 28907986 28908019 -170722131 + AT_rich Low_complexity Low_complexity 1 33 0 180 375 14 14 chr5 28908539 28908611 -170721539 - L2 LINE L2 -31 3282 3211 279 301 136 0 chr5 28908672 28908775 -170721375 + MER5C DNA MER1_type 8 124 -200 23 68 0 0 chr5 28908920 28908964 -170721186 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 28909730 28909756 -170720394 + AT_rich Low_complexity Low_complexity 1 26 0 30 45 0 0 chr5 28909974 28910018 -170720132 + AT_rich Low_complexity Low_complexity 1 44 0 744 68 17 8 chr5 28911587 28911704 -170718446 + (GAAA)n Simple_repeat Simple_repeat 2 119 0 183 261 0 0 chr5 28912277 28912323 -170717827 + L3b LINE CR1 1536 1581 -2 22 56 0 0 chr5 28912494 28912530 -170717620 + AT_rich Low_complexity Low_complexity 1 36 0 198 103 0 0 chr5 28912720 28912749 -170717401 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 285 333 37 15 chr5 28913119 28913254 -170716896 - MIR SINE MIR -34 228 91 22 56 0 0 chr5 28913279 28913315 -170716835 + AT_rich Low_complexity Low_complexity 1 36 0 1224 195 70 8 chr5 28915091 28915332 -170714818 - MSTB LTR MaLR 0 426 171 4352 210 110 4 chr5 28915337 28916265 -170713885 - MSTB-int LTR MaLR -625 1026 1 2275 190 17 9 chr5 28916265 28916686 -170713464 - MSTB LTR MaLR 0 426 3 482 108 12 0 chr5 28917603 28917686 -170712464 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 2145 125 0 3 chr5 28918344 28918655 -170711495 - AluSx SINE Alu -2 310 1 335 264 23 0 chr5 28918928 28919015 -170711135 + L1MC4 LINE L1 6614 6702 -1340 183 186 0 0 chr5 28919402 28919445 -170710705 + (TA)n Simple_repeat Simple_repeat 1 43 0 2012 131 0 7 chr5 28919488 28919779 -170710371 - AluSx SINE Alu -8 304 16 1151 238 38 3 chr5 28920222 28920512 -170709638 + AluJo SINE Alu 2 301 -1 346 246 24 16 chr5 28920920 28921046 -170709104 + (TA)n Simple_repeat Simple_repeat 1 127 0 235 296 23 0 chr5 28921046 28921134 -170709016 - L1MC4 LINE L1 -1339 6703 6614 222 209 23 0 chr5 28921138 28921181 -170708969 + GA-rich Low_complexity Low_complexity 1 44 0 704 264 0 28 chr5 28921194 28921372 -170708778 - MLT2C2 LTR ERVL -89 375 203 310 138 0 17 chr5 28921393 28921451 -170708699 - MLT2C2 LTR ERVL -407 57 1 31 58 0 0 chr5 28921984 28922036 -170708114 + AT_rich Low_complexity Low_complexity 1 52 0 2240 83 0 17 chr5 28922356 28922658 -170707492 + AluY SINE Alu 1 297 -14 29 47 0 0 chr5 28922859 28922902 -170707248 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr5 28922927 28922948 -170707202 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 28922986 28923009 -170707141 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 28923627 28923655 -170706495 + AT_rich Low_complexity Low_complexity 1 28 0 205 214 0 0 chr5 28924221 28924263 -170705887 - L2 LINE L2 0 3313 3272 265 214 56 0 chr5 28924295 28924384 -170705766 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 3472 218 44 36 chr5 28925757 28926556 -170703594 - L1MB4 LINE L1 -1 6415 5592 2273 111 0 0 chr5 28926556 28926862 -170703288 - AluSg SINE Alu -4 306 1 3472 218 44 36 chr5 28926862 28927344 -170702806 - L1MB4 LINE L1 -824 5592 5115 972 265 42 11 chr5 28927355 28927714 -170702436 - L1MB4 LINE L1 -3594 2788 2419 2818 244 77 57 chr5 28927783 28928972 -170701178 - L1MB4 LINE L1 -4480 1904 693 28 71 0 0 chr5 28932021 28932077 -170698073 + AT_rich Low_complexity Low_complexity 1 56 0 22 0 0 0 chr5 28932320 28932342 -170697808 + AT_rich Low_complexity Low_complexity 1 22 0 1762 114 9 82 chr5 28932345 28932661 -170697489 - AluSx SINE Alu -19 293 1 198 293 35 0 chr5 28932675 28932733 -170697417 - L2 LINE L2 -62 3251 3192 261 357 54 36 chr5 28932771 28932939 -170697211 - L2 LINE L2 -259 3054 2884 21 82 0 0 chr5 28932952 28933001 -170697149 + AT_rich Low_complexity Low_complexity 1 49 0 2082 102 3 0 chr5 28933314 28933597 -170696553 + AluY SINE Alu 1 284 -27 423 0 0 0 chr5 28933597 28933644 -170696506 + (CA)n Simple_repeat Simple_repeat 2 48 0 21 36 0 0 chr5 28933705 28933733 -170696417 + AT_rich Low_complexity Low_complexity 1 28 0 195 318 35 75 chr5 28933783 28933956 -170696194 - L2 LINE L2 -212 3060 2895 24 32 0 0 chr5 28933994 28934025 -170696125 + AT_rich Low_complexity Low_complexity 1 31 0 659 236 99 81 chr5 28934106 28934428 -170695722 - L1ME2 LINE L1 -1 6163 5836 1696 287 63 39 chr5 28934431 28934602 -170695548 - L1MEc LINE L1 -4242 2154 1989 1594 70 124 77 chr5 28934602 28934861 -170695289 + AluY SINE Alu 28 298 -13 1696 287 63 39 chr5 28934861 28935557 -170694593 - L1MEc LINE L1 -4407 1989 1266 4814 171 24 21 chr5 28935564 28936868 -170693282 - L1PB3 LINE L1 -4 6866 5554 638 243 0 29 chr5 28936873 28937083 -170693067 - L1PB3 LINE L1 -1713 5149 4946 1992 163 45 59 chr5 28937101 28937581 -170692569 + MLT2A2 LTR ERVL 1 500 -54 261 119 0 0 chr5 28937585 28937627 -170692523 + (TA)n Simple_repeat Simple_repeat 1 42 0 552 203 90 15 chr5 28937627 28937760 -170692390 - L1ME2 LINE L1 -29 6135 5993 207 232 18 0 chr5 28937763 28937819 -170692331 + (TA)n Simple_repeat Simple_repeat 1 57 0 736 171 35 31 chr5 28937821 28937992 -170692158 - MLT2A2 LTR ERVL -35 504 293 341 111 0 0 chr5 28938024 28938078 -170692072 + MLT2A1 LTR ERVL 391 444 0 7204 224 15 22 chr5 28938081 28939118 -170691032 - L1PB3 LINE L1 -1923 4939 3919 1751 151 70 25 chr5 28939118 28939475 -170690675 - THE1C LTR MaLR -2 373 1 7204 224 15 22 chr5 28939475 28940346 -170689804 - L1PB3 LINE L1 -2943 3919 3044 1749 194 126 8 chr5 28940361 28940733 -170689417 - MSTA LTR MaLR -12 416 1 8315 168 11 48 chr5 28940733 28942354 -170687796 - MSTA-int LTR MaLR 0 1580 21 1781 163 127 18 chr5 28942366 28942752 -170687398 - MSTA LTR MaLR 0 428 1 5265 240 62 21 chr5 28942752 28946575 -170683575 - L1PB3 LINE L1 -3814 3048 3 1997 157 7 0 chr5 28946724 28947030 -170683120 + AluSx SINE Alu 2 309 -3 268 321 97 24 chr5 28947791 28947956 -170682194 + L2 LINE L2 2998 3174 -139 21 0 0 0 chr5 28947970 28947991 -170682159 + AT_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr5 28949290 28949332 -170680818 + AT_rich Low_complexity Low_complexity 1 42 0 25 51 0 0 chr5 28950550 28950589 -170679561 + AT_rich Low_complexity Low_complexity 1 39 0 10918 34 0 0 chr5 28951697 28953789 -170676361 + L1PA3 LINE L1 4062 6155 0 29 70 0 0 chr5 28953843 28953900 -170676250 + AT_rich Low_complexity Low_complexity 1 57 0 1651 219 38 14 chr5 28953900 28954266 -170675884 + Tigger1 DNA MER2_type 2 376 -2042 6698 141 25 7 chr5 28954270 28954656 -170675494 + Tigger1 DNA MER2_type 792 1170 -1248 1874 148 24 0 chr5 28954656 28954947 -170675203 + AluSx SINE Alu 1 298 -14 6698 141 25 7 chr5 28954947 28955637 -170674513 + Tigger1 DNA MER2_type 1170 1887 -531 2017 234 18 24 chr5 28955648 28956196 -170673954 + L1 LINE L1 3939 4483 -1663 25 51 0 0 chr5 28956247 28956286 -170673864 + AT_rich Low_complexity Low_complexity 1 39 0 267 286 94 72 chr5 28956289 28956565 -170673585 + HAL1 LINE L1 1458 1739 -768 2647 185 35 2 chr5 28956785 28957330 -170672820 + L1MC1 LINE L1 5613 6175 -158 4195 224 16 1 chr5 28957437 28958301 -170671849 - L1M1 LINE L1 -6676 889 13 9623 48 10 0 chr5 28958730 28960224 -170669926 + L1P2 LINE L1 4152 5657 -498 24 53 0 0 chr5 28960464 28960502 -170669648 + AT_rich Low_complexity Low_complexity 1 38 0 417 248 39 26 chr5 28960659 28960812 -170669338 - L1ME1 LINE L1 -5 6161 6007 207 69 0 0 chr5 28960890 28960919 -170669231 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr5 28961148 28961178 -170668972 + AT_rich Low_complexity Low_complexity 1 30 0 298 207 24 18 chr5 28961716 28961890 -170668260 + (TA)n Simple_repeat Simple_repeat 1 175 0 25 83 0 0 chr5 28962581 28962641 -170667509 + AT_rich Low_complexity Low_complexity 1 60 0 1355 254 24 46 chr5 28962776 28963277 -170666873 - MLT1D LTR MaLR 0 505 16 5601 80 4 1 chr5 28963814 28964563 -170665587 + L1PA7 LINE L1 5401 6151 -3 23 68 0 0 chr5 28964567 28964611 -170665539 + AT_rich Low_complexity Low_complexity 1 44 0 6094 148 12 19 chr5 28964874 28966334 -170663816 - L1MA3 LINE L1 -1 7723 6281 * 14088 193 37 16 chr5 28966323 28969862 -170660288 - L1MA3 LINE L1 -3108 4457 840 7083 54 6 0 chr5 28969968 28971328 -170658822 + L1PA5 LINE L1 4788 6154 0 1722 214 119 35 chr5 28971752 28972187 -170657963 + MER70A LTR ERVL 1 472 0 463 310 61 56 chr5 28973705 28973918 -170656232 - LTR33 LTR ERVL -297 224 11 23 33 0 0 chr5 28974404 28974434 -170655716 + AT_rich Low_complexity Low_complexity 1 30 0 28 0 0 0 chr5 28974790 28974818 -170655332 + AT_rich Low_complexity Low_complexity 1 28 0 209 125 25 0 chr5 28975704 28975744 -170654406 + (TA)n Simple_repeat Simple_repeat 2 42 0 1661 143 91 20 chr5 28976778 28977128 -170653022 + THE1C LTR MaLR 1 375 0 1885 152 0 7 chr5 28977697 28977986 -170652164 - AluSg SINE Alu -23 287 1 598 372 42 21 chr5 28979729 28980154 -170649996 + MERVL LTR ERVL 4177 4610 -875 252 176 103 7 chr5 28980625 28980761 -170649389 + (TA)n Simple_repeat Simple_repeat 2 150 0 881 298 84 17 chr5 28980876 28981339 -170648811 + L1MC4 LINE L1 5412 5905 -1903 545 295 53 66 chr5 28981838 28982128 -170648022 + L1MC4 LINE L1 6641 6819 -966 180 77 0 0 chr5 28982220 28982246 -170647904 + (TG)n Simple_repeat Simple_repeat 1 26 0 446 306 46 32 chr5 28982386 28982759 -170647391 + L1MC4 LINE L1 7117 7494 -548 652 270 90 4 chr5 28983113 28983380 -170646770 - L1ME1 LINE L1 -1 6165 5876 22 35 0 0 chr5 28983429 28983458 -170646692 + AT_rich Low_complexity Low_complexity 1 29 0 181 75 50 0 chr5 28983787 28983827 -170646323 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 367 205 46 7 chr5 28983827 28983978 -170646172 + (TA)n Simple_repeat Simple_repeat 2 158 0 3269 134 24 7 chr5 28984070 28984736 -170645414 + LTR1 LTR ERV1 17 785 0 2099 128 7 0 chr5 28985059 28985365 -170644785 - AluY SINE Alu -3 308 1 21 36 0 0 chr5 28986085 28986113 -170644037 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 28987412 28987442 -170642708 + AT_rich Low_complexity Low_complexity 1 30 0 350 66 0 82 chr5 28987734 28987795 -170642355 - MLT2A1 LTR ERVL 0 444 389 5503 156 45 17 chr5 28987813 28988884 -170641266 - HERVL-A1 LTR ERVL -155 5499 4399 * 17653 83 16 12 chr5 28988879 28991286 -170638864 - HERVL-A1 LTR ERVL -3238 2416 1 3101 78 32 7 chr5 28991286 28991334 -170638816 - MLT2A1 LTR ERVL 0 444 399 333 0 0 0 chr5 28991334 28991371 -170638779 + (CA)n Simple_repeat Simple_repeat 2 38 0 3101 78 32 7 chr5 28991371 28991755 -170638395 - MLT2A1 LTR ERVL -45 399 1 28 79 0 0 chr5 28992532 28992595 -170637555 + AT_rich Low_complexity Low_complexity 1 63 0 1956 121 39 0 chr5 28993125 28993407 -170636743 + AluSq SINE Alu 1 293 -20 423 0 0 0 chr5 28993548 28993595 -170636555 + (TG)n Simple_repeat Simple_repeat 2 48 0 2503 56 0 0 chr5 28994414 28994720 -170635430 + AluY SINE Alu 1 306 -5 236 277 138 44 chr5 28995251 28995410 -170634740 + L2 LINE L2 2918 3091 -181 22 0 0 0 chr5 28996867 28996889 -170633261 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 28996929 28996951 -170633199 + AT_rich Low_complexity Low_complexity 1 22 0 2235 263 47 64 chr5 28997783 28998860 -170631290 - L1M4c LINE L1 -4440 2385 1292 1975 149 3 0 chr5 28998860 28999156 -170630994 + AluSx SINE Alu 12 308 -4 2235 263 47 64 chr5 28999156 28999297 -170630853 - L1M4c LINE L1 -5533 1292 1150 1529 210 40 0 chr5 28999297 28999597 -170630553 + AluJo SINE Alu 1 312 0 2235 263 47 64 chr5 28999597 28999704 -170630446 - L1M4c LINE L1 -5675 1150 948 5886 92 13 2 chr5 28999715 29001067 -170629083 - L1PA8A LINE L1 -2 6129 4768 7080 133 23 3 chr5 29001068 29002215 -170627935 + L1PA8A LINE L1 3624 4793 -1353 372 261 31 77 chr5 29002209 29002404 -170627746 - L1M4c LINE L1 -5593 949 764 * 5647 251 36 10 chr5 29002513 29003854 -170626296 - ERVL-B3 LTR ERVL -4388 1376 1 2713 193 37 17 chr5 29003854 29003901 -170626249 - MLT2B3 LTR ERVL 0 554 509 459 0 0 0 chr5 29003901 29003952 -170626198 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 2713 193 37 17 chr5 29003952 29004444 -170625706 - MLT2B3 LTR ERVL -45 509 4 22 35 0 0 chr5 29004462 29004491 -170625659 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 29004574 29004598 -170625552 + AT_rich Low_complexity Low_complexity 1 24 0 933 81 22 0 chr5 29006217 29006353 -170623797 + L1PA10 LINE L1 6021 6159 -9 23 68 0 0 chr5 29006556 29006600 -170623550 + AT_rich Low_complexity Low_complexity 1 44 0 23 68 0 0 chr5 29006702 29006746 -170623404 + AT_rich Low_complexity Low_complexity 1 44 0 34526 70 14 1 chr5 29007681 29012289 -170617861 + L1P LINE L1 11 4675 -1471 5319 85 33 1 chr5 29012401 29013190 -170616960 - HERVL-A1 LTR ERVL -4840 814 1 2815 79 53 7 chr5 29013190 29013238 -170616912 - MLT2A1 LTR ERVL 0 444 400 333 0 0 0 chr5 29013238 29013275 -170616875 + (CA)n Simple_repeat Simple_repeat 2 38 0 2815 79 53 7 chr5 29013275 29013644 -170616506 - MLT2A1 LTR ERVL -44 400 8 4138 240 36 4 chr5 29013841 29015074 -170615076 - L1 LINE L1 -2660 3486 2214 276 325 75 20 chr5 29015375 29015575 -170614575 + LTR16C LTR ERVL 279 489 -2 21 36 0 0 chr5 29016502 29016530 -170613620 + AT_rich Low_complexity Low_complexity 1 28 0 613 177 94 22 chr5 29016638 29016819 -170613331 + MER3 DNA MER1_type 7 200 -9 4440 159 80 8 chr5 29016935 29018087 -170612063 - L1PB1 LINE L1 -66 6085 4849 1922 129 7 10 chr5 29018187 29018490 -170611660 - AluSx SINE Alu -10 302 1 872 137 172 20 chr5 29018491 29018695 -170611455 - L1MB2 LINE L1 -343 5828 5594 322 309 67 11 chr5 29018972 29019150 -170611000 - L1M4 LINE L1 -2154 3992 3805 1137 240 58 33 chr5 29019733 29020088 -170610062 + MLT1A1 LTR MaLR 3 365 0 401 173 55 16 chr5 29020668 29020795 -170609355 - Alu SINE Alu -2 308 177 22 35 0 0 chr5 29021026 29021055 -170609095 + AT_rich Low_complexity Low_complexity 1 29 0 226 229 21 0 chr5 29021622 29021670 -170608480 + GA-rich Low_complexity Low_complexity 2 50 0 2027 119 0 29 chr5 29021737 29022049 -170608101 - AluSx SINE Alu -9 303 1 353 314 50 7 chr5 29022068 29022208 -170607942 + MIR SINE MIR 3 148 -114 567 193 18 0 chr5 29022387 29022501 -170607649 + MER46C DNA MER2_type 79 194 -144 189 74 0 0 chr5 29022800 29022827 -170607323 + (TG)n Simple_repeat Simple_repeat 2 28 0 352 347 58 26 chr5 29024727 29024917 -170605233 + LTR33 LTR ERVL 1 196 -325 232 360 10 0 chr5 29025031 29025131 -170605019 + LTR33 LTR ERVL 366 466 -55 26 50 0 0 chr5 29025288 29025328 -170604822 + AT_rich Low_complexity Low_complexity 1 40 0 534 285 21 11 chr5 29025615 29025801 -170604349 + LTR33 LTR ERVL 326 513 -8 1386 251 181 43 chr5 29027367 29028040 -170602110 + LTR41 LTR ERVL 2 767 -6 334 218 24 73 chr5 29028100 29028224 -170601926 + L1ME2 LINE L1 5660 5777 -385 416 317 49 19 chr5 29029116 29029321 -170600829 + LTR16C LTR ERVL 279 489 -2 21 36 0 0 chr5 29030259 29030287 -170599863 + AT_rich Low_complexity Low_complexity 1 28 0 864 185 56 26 chr5 29030395 29030590 -170599560 + MER3 DNA MER1_type 7 207 -2 27 81 0 0 chr5 29031200 29031262 -170598888 + AT_rich Low_complexity Low_complexity 1 62 0 1580 230 26 15 chr5 29031823 29032214 -170597936 + LTR52 LTR ERVL 1 395 -26 2719 234 19 27 chr5 29032240 29032915 -170597235 + LTR52-int LTR ERVL 4 673 -2883 405 221 23 0 chr5 29032938 29033024 -170597126 + LTR52-int LTR ERVL 846 933 -2623 3746 251 57 73 chr5 29033093 29034756 -170595394 + LTR52-int LTR ERVL 1132 2768 -2917 2449 128 186 20 chr5 29034757 29035267 -170594883 + LTR49 LTR ERV1 1 595 0 572 140 50 0 chr5 29035267 29035367 -170594783 + LTR52-int LTR ERVL 2766 2870 -2815 310 191 169 0 chr5 29035484 29035573 -170594577 + L1ME2 LINE L1 5804 5907 -257 2391 76 3 3 chr5 29035807 29036108 -170594042 - AluSp SINE Alu -12 301 1 2098 118 0 3 chr5 29036361 29036682 -170593468 - AluSx SINE Alu 0 320 1 30 27 0 0 chr5 29036908 29036945 -170593205 + AT_rich Low_complexity Low_complexity 1 37 0 1962 177 21 8 chr5 29037034 29037419 -170592731 + L1MA6 LINE L1 5902 6291 -9 2133 105 0 43 chr5 29037439 29037763 -170592387 - AluSx SINE Alu -2 310 1 1933 134 0 3 chr5 29038112 29038395 -170591755 - AluSg SINE Alu -22 288 7 402 261 155 18 chr5 29038585 29038811 -170591339 + LTR50 LTR ERVL 12 268 -527 236 328 0 0 chr5 29040667 29040731 -170589419 + MER20B DNA MER1_type 86 149 -634 1975 236 40 2 chr5 29042166 29042610 -170587540 - LTR53 LTR ERVL -31 488 28 636 221 21 0 chr5 29042773 29042913 -170587237 + L1PB4 LINE L1 6008 6150 -6 1903 165 131 8 chr5 29043091 29043472 -170586678 - MSTA LTR MaLR 0 428 1 8434 164 8 43 chr5 29043472 29045107 -170585043 - MSTA-int LTR MaLR 0 1580 3 1572 174 174 8 chr5 29045109 29045476 -170584674 - MSTA LTR MaLR 0 428 1 1154 112 0 22 chr5 29045643 29045821 -170584329 - MSTA-int LTR MaLR -94 1486 1313 582 342 108 36 chr5 29046299 29046773 -170583377 + L2 LINE L2 2804 3311 -2 188 301 55 0 chr5 29046848 29046921 -170583229 - L2 LINE L2 -536 2778 2702 421 307 23 17 chr5 29048469 29048645 -170581505 + MER45A DNA AcHobo 1 177 -1 5553 155 62 13 chr5 29050008 29051126 -170579024 - Tigger3b DNA MER2_type 0 1231 41 378 225 56 0 chr5 29051144 29051233 -170578917 + MER69 DNA AcHobo 2425 2518 -8 843 26 61 0 chr5 29051338 29051518 -170578632 + L1PA4 LINE L1 6031 6217 0 496 375 19 16 chr5 29051520 29051837 -170578313 - HERV16 LTR ERVL -2105 2891 2574 1862 117 71 0 chr5 29052771 29053052 -170577098 + AluSg SINE Alu 1 301 -9 2917 200 30 12 chr5 29053245 29053839 -170576311 - MER6A DNA MER2_type 0 605 1 357 24 0 0 chr5 29053865 29053907 -170576243 + (CA)n Simple_repeat Simple_repeat 1 42 0 28 29 0 0 chr5 29054431 29054466 -170575684 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 29054663 29054686 -170575464 + AT_rich Low_complexity Low_complexity 1 23 0 578 221 100 122 chr5 29054686 29055097 -170575053 - MER93a LTR ERV1 0 402 1 278 385 36 15 chr5 29055428 29055623 -170574527 + L2 LINE L2 1889 2087 -1227 254 294 136 17 chr5 29055627 29055804 -170574346 + L2 LINE L2 2463 2660 -654 1679 193 36 14 chr5 29056080 29056437 -170573713 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr5 29057775 29057797 -170572353 + AT_rich Low_complexity Low_complexity 1 22 0 1726 71 4 8 chr5 29058130 29058370 -170571780 + L1PA8 LINE L1 5934 6172 0 312 27 0 0 chr5 29058733 29058770 -170571380 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1773 202 26 21 chr5 29059274 29059660 -170570490 - MLT1B LTR MaLR 0 390 3 37 0 0 0 chr5 29061027 29061064 -170569086 + AT_rich Low_complexity Low_complexity 1 37 0 242 108 0 0 chr5 29061104 29061141 -170569009 - L1MCa LINE L1 -5275 1151 1115 1046 201 65 77 chr5 29064021 29064374 -170565776 + LTR49 LTR ERV1 1 349 -246 207 0 0 0 chr5 29064412 29064435 -170565715 + (A)n Simple_repeat Simple_repeat 1 23 0 350 199 84 96 chr5 29064442 29064608 -170565542 + LTR48 LTR ERV1 624 787 0 314 294 0 0 chr5 29065046 29065114 -170565036 + tRNA-Glu-GAG tRNA tRNA 8 75 0 26 50 0 0 chr5 29066470 29066510 -170563640 + AT_rich Low_complexity Low_complexity 1 40 0 7472 30 5 0 chr5 29067396 29068882 -170561268 - L1PA4 LINE L1 0 6155 4666 8463 29 1 0 chr5 29068882 29069898 -170560252 + L1PA4 LINE L1 3640 4656 -1490 1478 186 27 10 chr5 29070851 29071147 -170559003 - AluJb SINE Alu -7 305 5 189 147 0 0 chr5 29071433 29071467 -170558683 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 710 233 24 63 chr5 29071467 29071509 -170558641 - MLT2D LTR ERVL 0 414 372 408 20 0 0 chr5 29071509 29071558 -170558592 + (TG)n Simple_repeat Simple_repeat 2 50 0 710 233 24 63 chr5 29071558 29071721 -170558429 - MLT2D LTR ERVL -42 372 217 * 744 179 134 6 chr5 29071713 29071892 -170558258 - MLT1B LTR MaLR -188 202 1 22 80 0 0 chr5 29071935 29071985 -170558165 + AT_rich Low_complexity Low_complexity 1 50 0 11972 148 54 40 chr5 29073508 29074028 -170556122 + Tigger1 DNA MER2_type 6 517 -1901 1834 169 24 0 chr5 29074028 29074323 -170555827 + AluSx SINE Alu 1 302 -10 11972 148 54 40 chr5 29074323 29076113 -170554037 + Tigger1 DNA MER2_type 517 2347 -71 2218 255 61 24 chr5 29076114 29076815 -170553335 - MER50 LTR ERV1 0 734 8 412 181 0 0 chr5 29076821 29076893 -170553257 + Tigger1 DNA MER2_type 2347 2418 0 213 347 40 52 chr5 29077001 29077174 -170552976 - MIR SINE MIR -2 260 90 251 192 0 19 chr5 29077326 29077378 -170552772 - MLT1G1 LTR MaLR -2 540 490 405 337 15 7 chr5 29077446 29077625 -170552525 - MLT1G1 LTR MaLR -186 391 248 21 0 0 0 chr5 29077998 29078019 -170552131 + AT_rich Low_complexity Low_complexity 1 21 0 372 43 0 0 chr5 29078404 29078450 -170551700 + (CA)n Simple_repeat Simple_repeat 1 46 0 288 171 86 0 chr5 29078460 29078530 -170551620 + MSTC LTR MaLR 336 411 -17 1382 222 50 58 chr5 29079010 29079407 -170550743 + MSTD LTR MaLR 3 396 0 2311 144 0 18 chr5 29079487 29079869 -170550281 - THE1C LTR MaLR 0 375 1 4573 115 2 2 chr5 29079869 29080504 -170549646 - THE1C-int LTR MaLR 0 1580 946 1819 141 3 21 chr5 29080526 29080816 -170549334 + THE1-int LTR MaLR 665 949 -631 306 337 63 11 chr5 29080873 29081048 -170549102 - HAL1 LINE L1 -1029 1478 1295 555 351 94 23 chr5 29081138 29081616 -170548534 - HAL1 LINE L1 -1785 722 211 215 0 67 0 chr5 29082384 29082414 -170547736 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 329 326 0 0 chr5 29082424 29082519 -170547631 - MER69A DNA AcHobo -82 95 1 496 258 14 120 chr5 29083007 29083224 -170546926 - L2 LINE L2 -349 2965 2772 829 190 45 15 chr5 29083890 29084090 -170546060 - L1MA7 LINE L1 0 6291 6086 331 148 0 0 chr5 29084135 29084189 -170545961 - L1MA7 LINE L1 -193 6098 6045 2072 112 0 29 chr5 29085578 29085891 -170544259 + AluSq SINE Alu 1 304 -9 227 242 62 39 chr5 29086142 29086270 -170543880 + L1M4 LINE L1 4231 4361 -1785 337 248 26 137 chr5 29086887 29087069 -170543081 - MLT1L LTR MaLR 0 615 463 2208 136 16 19 chr5 29087069 29087445 -170542705 + THE1C LTR MaLR 1 375 0 337 248 26 137 chr5 29087445 29087496 -170542654 - MLT1L LTR MaLR -152 463 408 24 77 0 0 chr5 29088490 29088542 -170541608 + AT_rich Low_complexity Low_complexity 1 52 0 5060 251 63 69 chr5 29088580 29091024 -170539126 - ERVL-C1 LTR ERVL -1957 3807 1259 1986 192 14 57 chr5 29091071 29091509 -170538641 - MSTB1 LTR MaLR -13 419 1 1327 292 73 29 chr5 29091511 29091824 -170538326 - ERVL-C1 LTR ERVL -4551 1213 915 1729 144 60 41 chr5 29091824 29092192 -170537958 + THE1C LTR MaLR 1 375 0 1327 292 73 29 chr5 29092192 29092670 -170537480 - ERVL-C1 LTR ERVL -4849 915 294 1708 160 9 47 chr5 29092670 29092989 -170537161 + AluJb SINE Alu 1 307 -5 1327 292 73 29 chr5 29092989 29093204 -170536946 - ERVL-C1 LTR ERVL -5470 294 90 1793 124 3 57 chr5 29093273 29093587 -170536563 + AluSc SINE Alu 1 297 -12 282 29 0 0 chr5 29093589 29093624 -170536526 + (CA)n Simple_repeat Simple_repeat 2 36 0 897 270 70 39 chr5 29093647 29094032 -170536118 - MLT2C1 LTR ERVL 0 397 1 203 365 35 17 chr5 29094104 29094219 -170535931 - L2 LINE L2 -521 2793 2677 238 334 86 52 chr5 29094709 29094858 -170535292 - L2 LINE L2 -1264 2050 1908 1967 136 4 0 chr5 29094858 29095185 -170534965 + AluSg SINE Alu 1 328 0 238 334 86 52 chr5 29095185 29095441 -170534709 - L2 LINE L2 -1406 1908 1630 208 265 216 20 chr5 29095464 29095566 -170534584 + L2 LINE L2 3191 3312 -1 30 0 0 0 chr5 29095738 29095768 -170534382 + AT_rich Low_complexity Low_complexity 1 30 0 218 310 0 0 chr5 29096057 29096115 -170534035 + L2 LINE L2 3001 3058 -214 23 33 0 0 chr5 29097808 29097838 -170532312 + AT_rich Low_complexity Low_complexity 1 30 0 2320 88 3 0 chr5 29098440 29098737 -170531413 - AluSp SINE Alu -15 298 1 183 42 0 0 chr5 29098842 29098866 -170531284 + (T)n Simple_repeat Simple_repeat 1 24 0 2103 134 0 0 chr5 29099445 29099752 -170530398 + AluSg SINE Alu 1 307 -3 8422 218 66 43 chr5 29100068 29101868 -170528282 - L1MC3 LINE L1 0 9204 7447 1932 99 58 0 chr5 29101868 29102161 -170527989 - AluSg SINE Alu 0 310 1 8422 218 66 43 chr5 29102161 29102183 -170527967 - L1MC3 LINE L1 -1757 7447 7427 2384 67 0 3 chr5 29102183 29102483 -170527667 - AluY SINE Alu -12 299 1 8422 218 66 43 chr5 29102483 29103322 -170526828 - L1MC3 LINE L1 -1777 7427 6478 1686 200 91 28 chr5 29103322 29103783 -170526367 + LTR2B LTR ERV1 1 490 0 8422 218 66 43 chr5 29103783 29103875 -170526275 - L1MC3 LINE L1 -2726 6478 6390 5035 285 48 17 chr5 29103849 29106012 -170524138 - L1MC3 LINE L1 -1774 5791 3561 * 248 230 40 0 chr5 29106014 29106088 -170524062 + (TAGA)n Simple_repeat Simple_repeat 1 77 0 701 283 74 36 chr5 29106110 29106686 -170523464 - L1MC3 LINE L1 -4263 3483 2802 629 252 92 56 chr5 29106723 29106973 -170523177 - L1MC3 LINE L1 -5255 1791 1533 500 297 48 0 chr5 29107251 29107416 -170522734 - MLT1F1 LTR MaLR -385 182 10 1493 215 32 24 chr5 29108136 29108375 -170521775 - L1MB8 LINE L1 -2 6176 5931 2135 112 0 3 chr5 29108375 29108670 -170521480 - AluSx SINE Alu -18 294 1 1493 215 32 24 chr5 29108670 29108806 -170521344 - L1MB8 LINE L1 -247 5931 5798 497 221 66 22 chr5 29108832 29109013 -170521137 - L1M4 LINE L1 -3782 3175 2987 * 4436 275 68 45 chr5 29109008 29109156 -170520994 - L1M4 LINE L1 -4550 2409 2266 1986 96 30 4 chr5 29109156 29109454 -170520696 - AluSg SINE Alu 0 308 4 4436 275 68 45 chr5 29109454 29109989 -170520161 - L1M4 LINE L1 -4693 2266 1745 2078 110 0 0 chr5 29109989 29110324 -170519826 - AluSc SINE Alu 0 335 1 4436 275 68 45 chr5 29110324 29111984 -170518166 - L1M4 LINE L1 -5214 1745 11 262 391 77 6 chr5 29112544 29112700 -170517450 - MIR3 SINE MIR -38 170 4 26 0 0 0 chr5 29113189 29113215 -170516935 + AT_rich Low_complexity Low_complexity 1 26 0 826 312 54 10 chr5 29113554 29113868 -170516282 - MER69 DNA AcHobo -2198 328 1 181 376 65 0 chr5 29114123 29114216 -170515934 + L2 LINE L2 2716 2814 -500 251 260 156 10 chr5 29114541 29114637 -170515513 + L2 LINE L2 3163 3272 0 7210 171 40 9 chr5 29114799 29116116 -170514034 - Tigger1 DNA MER2_type 0 2418 1061 3122 153 33 0 chr5 29118447 29118988 -170511162 - Tigger1 DNA MER2_type -1339 1079 521 356 135 11 56 chr5 29118989 29119078 -170511072 - L1PA16 LINE L1 -2 6164 6080 274 330 36 9 chr5 29119078 29119190 -170510960 + L2 LINE L2 3196 3310 -3 13014 203 44 8 chr5 29119211 29124373 -170505777 - L1PB1 LINE L1 -5 6862 1517 2096 143 39 22 chr5 29124373 29124572 -170505578 - THE1B LTR MaLR 0 364 155 2344 38 0 3 chr5 29124572 29124862 -170505288 - L1PA2 LINE L1 0 6155 5867 2096 143 39 22 chr5 29124862 29125020 -170505130 - THE1B LTR MaLR -209 155 1 9098 158 10 5 chr5 29125020 29126531 -170503619 - L1PB1 LINE L1 -5342 1521 3 2792 182 19 15 chr5 29126542 29127074 -170503076 - Tigger1 DNA MER2_type -1884 534 1 1350 194 70 65 chr5 29127259 29127646 -170502504 + MLT1B LTR MaLR 1 389 -1 27 81 0 0 chr5 29127741 29127803 -170502347 + AT_rich Low_complexity Low_complexity 1 62 0 230 207 96 111 chr5 29128467 29128738 -170501412 - L1M4 LINE L1 -1484 4662 4396 2287 166 60 66 chr5 29128942 29129309 -170500841 - L1MB2 LINE L1 -2 6169 5805 1978 133 0 10 chr5 29129309 29129637 -170500513 - AluSx SINE Alu 0 312 1 2287 166 60 66 chr5 29129637 29129848 -170500302 - L1MB2 LINE L1 -366 5805 5594 272 315 99 23 chr5 29129832 29130305 -170499845 - L1M4 LINE L1 -1822 4324 3816 * 971 296 32 20 chr5 29130494 29130937 -170499213 - L1M4 LINE L1 -1987 4159 3712 * 4185 208 40 18 chr5 29130932 29132756 -170497394 + L1MA9 LINE L1 4277 6150 -162 245 303 40 0 chr5 29133746 29133822 -170496328 + MLT2F LTR ERVL 157 235 -428 254 377 14 41 chr5 29133874 29134094 -170496056 + MLT2F LTR ERVL 241 454 -209 375 176 0 0 chr5 29134118 29134186 -170495964 - AluJ/FLAM SINE Alu -230 72 5 344 309 40 17 chr5 29134196 29134371 -170495779 + MLT2F LTR ERVL 463 641 -22 1975 177 26 31 chr5 29135054 29135511 -170494639 - L1MA8 LINE L1 -3 6288 5834 1248 229 50 37 chr5 29136335 29136794 -170493356 - LTR37B LTR ERV1 0 468 4 23 68 0 0 chr5 29137125 29137169 -170492981 + AT_rich Low_complexity Low_complexity 1 44 0 7327 124 82 109 chr5 29137733 29139479 -170490671 - pTR5 LTR ERV1 0 2438 741 2275 84 6 6 chr5 29139501 29139812 -170490338 + AluY SINE Alu 1 311 0 1189 246 44 33 chr5 29140399 29140760 -170489390 - MLT1A1 LTR MaLR 0 365 1 2083 144 0 0 chr5 29141013 29141326 -170488824 - AluSp SINE Alu 0 313 1 27 81 0 0 chr5 29141463 29141525 -170488625 + AT_rich Low_complexity Low_complexity 1 62 0 341 340 139 4 chr5 29142010 29142248 -170487902 + Charlie2 DNA MER1_type 46 315 -2467 4970 143 4 7 chr5 29142272 29143093 -170487057 + L1PA15 LINE L1 5346 6163 -2 333 268 177 26 chr5 29143219 29143618 -170486532 - L1ME3A LINE L1 -112 6058 5595 658 161 36 93 chr5 29143742 29143832 -170486318 + LTR38 LTR ERV1 1 76 -480 1898 150 0 3 chr5 29143832 29144125 -170486025 - AluSx SINE Alu -20 292 1 658 161 36 93 chr5 29144125 29144227 -170485923 + LTR38 LTR ERV1 76 182 -374 5213 176 23 28 chr5 29144227 29144822 -170485328 + L1PA16 LINE L1 4738 5335 -831 396 0 0 0 chr5 29144822 29144866 -170485284 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 5213 176 23 28 chr5 29144866 29145707 -170484443 + L1PA16 LINE L1 5335 6157 -9 37 23 0 0 chr5 29145733 29145777 -170484373 + AT_rich Low_complexity Low_complexity 1 44 0 1801 181 64 13 chr5 29145798 29146174 -170483976 + LTR38 LTR ERV1 158 552 -4 23 33 0 0 chr5 29146206 29146236 -170483914 + AT_rich Low_complexity Low_complexity 1 30 0 259 138 15 15 chr5 29146238 29146303 -170483847 + (TATTG)n Simple_repeat Simple_repeat 1 65 0 304 158 0 0 chr5 29146488 29146545 -170483605 - L1MA4 LINE L1 0 6300 6244 * 469 156 46 37 chr5 29146519 29146628 -170483522 - L1M3f LINE L1 -5203 125 16 1672 208 0 0 chr5 29146677 29146989 -170483161 - AluJo SINE Alu 0 312 1 576 317 57 27 chr5 29147086 29147635 -170482515 - L1M4 LINE L1 -2238 3908 3344 1167 258 58 3 chr5 29148524 29148834 -170481316 - MER68 LTR ERV1 -9 553 227 393 172 35 23 chr5 29148833 29148920 -170481230 - LTR52 LTR ERVL -5 416 329 * 253 182 0 0 chr5 29148915 29148959 -170481191 - MER68 LTR ERV1 -467 95 52 * 517 261 30 0 chr5 29148958 29149092 -170481058 - MER77 LTR ERV1 -43 562 425 1179 162 0 5 chr5 29150280 29150471 -170479679 - AluSg/x SINE Alu -25 287 98 26 0 0 0 chr5 29151165 29151191 -170478959 + AT_rich Low_complexity Low_complexity 1 26 0 454 254 38 56 chr5 29151362 29151575 -170478575 + MER3 DNA MER1_type 1 209 0 339 281 175 31 chr5 29151626 29151786 -170478364 - MER5A DNA MER1_type 0 189 7 2307 110 0 0 chr5 29152023 29152333 -170477817 - AluSg SINE Alu 0 310 1 493 331 7 0 chr5 29152543 29152688 -170477462 + MIR SINE MIR 11 156 -106 21 0 0 0 chr5 29152757 29152778 -170477372 + AT_rich Low_complexity Low_complexity 1 21 0 355 269 10 19 chr5 29153131 29153235 -170476915 - MIR SINE MIR -56 206 104 727 303 35 45 chr5 29153244 29153706 -170476444 - L1M4 LINE L1 -1203 4943 4487 480 128 0 0 chr5 29154025 29154103 -170476047 - L1PA13 LINE L1 -4 6159 6082 401 91 0 0 chr5 29154107 29154162 -170475988 + L1PA13 LINE L1 6022 6076 -87 1555 250 15 11 chr5 29154626 29155300 -170474850 + MER21B LTR ERV1 19 750 -113 22 70 0 0 chr5 29155487 29155530 -170474620 + AT_rich Low_complexity Low_complexity 1 43 0 1329 269 78 47 chr5 29157769 29158319 -170471831 + MLT1E LTR MaLR 1 593 0 298 263 125 38 chr5 29158354 29158514 -170471636 + HERVL LTR ERVL 3165 3338 -2316 2823 189 41 8 chr5 29159040 29159535 -170470615 + MLT2B3 LTR ERVL 1 478 -76 600 53 21 11 chr5 29159535 29159629 -170470521 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 2823 189 41 8 chr5 29159629 29159640 -170470510 + MLT2B3 LTR ERVL 478 487 -67 1998 53 0 4 chr5 29159640 29159902 -170470248 - L1PA4 LINE L1 0 6155 5895 2823 189 41 8 chr5 29159902 29159929 -170470221 + MLT2B3 LTR ERVL 487 553 -1 266 336 9 28 chr5 29160544 29160651 -170469499 - MIR SINE MIR -156 106 2 381 248 21 57 chr5 29161178 29161319 -170468831 + MER77 LTR ERV1 60 195 -410 1015 256 62 100 chr5 29161350 29161881 -170468269 + MER77 LTR ERV1 140 601 -4 22 0 0 0 chr5 29164144 29164166 -170465984 + AT_rich Low_complexity Low_complexity 1 22 0 262 276 87 31 chr5 29164595 29164722 -170465428 - MLT1J2 LTR MaLR -33 417 284 27 0 0 0 chr5 29165563 29165590 -170464560 + AT_rich Low_complexity Low_complexity 1 27 0 205 152 0 0 chr5 29166408 29166441 -170463709 + (TG)n Simple_repeat Simple_repeat 2 34 0 2255 86 0 3 chr5 29167375 29167666 -170462484 + AluSc SINE Alu 8 297 -12 948 252 108 12 chr5 29167947 29168280 -170461870 - MLT1A1 LTR MaLR 0 365 1 931 287 175 5 chr5 29169007 29169425 -170460725 + L2 LINE L2 950 1438 -1876 423 291 89 55 chr5 29169803 29170433 -170459717 - L1MEc LINE L1 -4687 1709 1039 1898 141 0 28 chr5 29170433 29170753 -170459397 - AluY SINE Alu 0 311 1 423 291 89 55 chr5 29170753 29171014 -170459136 - L1MEc LINE L1 -5357 1039 788 206 279 13 13 chr5 29172308 29172387 -170457763 + CT-rich Low_complexity Low_complexity 2 80 0 23 0 0 0 chr5 29174533 29174556 -170455594 + AT_rich Low_complexity Low_complexity 1 23 0 2043 104 3 13 chr5 29175283 29175582 -170454568 + AluY SINE Alu 1 296 -15 2409 57 0 3 chr5 29176548 29176846 -170453304 + AluY SINE Alu 1 297 -14 1345 201 40 63 chr5 29178475 29178598 -170451552 + MLT1B LTR MaLR 1 125 -265 1845 146 0 0 chr5 29178598 29178879 -170451271 + AluSx SINE Alu 30 310 -2 1345 201 40 63 chr5 29178879 29179154 -170450996 + MLT1B LTR MaLR 125 390 0 2068 117 7 0 chr5 29179296 29179595 -170450555 - AluSx SINE Alu -11 301 1 21 36 0 0 chr5 29179849 29179877 -170450273 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 29179927 29179958 -170450192 + AT_rich Low_complexity Low_complexity 1 31 0 703 322 33 0 chr5 29180249 29180460 -170449690 + MIR SINE MIR 41 258 -4 246 160 0 0 chr5 29180823 29180873 -170449277 + CT-rich Low_complexity Low_complexity 1 50 0 220 221 15 29 chr5 29181815 29181883 -170448267 + A-rich Low_complexity Low_complexity 6 72 0 2383 148 22 36 chr5 29181891 29182336 -170447814 - MER65A LTR ERV1 -5 440 2 21 36 0 0 chr5 29182366 29182394 -170447756 + AT_rich Low_complexity Low_complexity 1 28 0 285 372 71 0 chr5 29182660 29182843 -170447307 - MIR SINE MIR -16 246 51 2497 66 0 0 chr5 29183395 29183698 -170446452 + AluY SINE Alu 1 303 -8 361 216 50 144 chr5 29183759 29183898 -170446252 - L2 LINE L2 -8 3305 3180 4216 204 42 15 chr5 29183936 29184241 -170445909 - MER54A LTR ERVL -2 899 604 2124 133 10 51 chr5 29184241 29184596 -170445554 - THE1C LTR MaLR 0 375 36 2043 144 3 0 chr5 29184596 29184901 -170445249 + AluSx SINE Alu 1 306 -6 2124 133 10 51 chr5 29184901 29184936 -170445214 - THE1C LTR MaLR -339 36 1 4216 204 42 15 chr5 29184936 29185484 -170444666 - MER54A LTR ERVL -297 604 23 2897 298 74 40 chr5 29185540 29186921 -170443229 - L2 LINE L2 -215 3098 1651 1652 205 18 12 chr5 29186924 29187266 -170442884 + MLT2D LTR ERVL 1 344 -70 1225 282 164 10 chr5 29187312 29187805 -170442345 - L2 LINE L2 -1815 1499 931 219 69 0 0 chr5 29189018 29189047 -170441103 + (TA)n Simple_repeat Simple_repeat 1 29 0 330 26 0 0 chr5 29189049 29189088 -170441062 + (CA)n Simple_repeat Simple_repeat 2 40 0 1543 179 17 30 chr5 29190983 29191280 -170438870 + AluJo SINE Alu 3 295 -17 423 352 86 25 chr5 29193479 29193906 -170436244 - L1ME4a LINE L1 -296 5825 5372 206 314 11 122 chr5 29195019 29195188 -170434962 - L2 LINE L2 -181 3091 2943 2536 120 3 8 chr5 29195188 29195554 -170434596 - THE1B LTR MaLR 0 364 1 206 314 11 122 chr5 29195554 29195572 -170434578 - L2 LINE L2 -329 2943 2925 321 238 0 12 chr5 29195671 29195755 -170434395 - L1MDa LINE L1 -3383 3157 3075 1589 244 20 0 chr5 29195851 29196207 -170433943 - MLT1A1 LTR MaLR -2 363 1 198 103 0 0 chr5 29196492 29196521 -170433629 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 319 260 13 110 chr5 29196561 29196715 -170433435 - L1MDa LINE L1 -5104 1436 1298 218 122 0 61 chr5 29197830 29197879 -170432271 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 324 0 0 0 chr5 29197889 29197925 -170432225 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 35954 34 113 3 chr5 29197925 29203435 -170426715 - L1PA2 LINE L1 -13 6142 7 942 171 38 86 chr5 29203440 29203732 -170426418 - MER33 DNA MER1_type -41 283 6 22 0 0 0 chr5 29204041 29204063 -170426087 + AT_rich Low_complexity Low_complexity 1 22 0 2427 150 7 41 chr5 29205131 29205592 -170424558 - MER65A LTR ERV1 0 445 1 231 297 22 11 chr5 29205768 29205859 -170424291 + CT-rich Low_complexity Low_complexity 6 97 0 2063 108 4 0 chr5 29207221 29207499 -170422651 + AluSp SINE Alu 35 313 0 211 284 67 20 chr5 29207524 29207623 -170422527 + MIR SINE MIR 34 144 -64 28 29 0 0 chr5 29208597 29208632 -170421518 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 29210204 29210229 -170419921 + AT_rich Low_complexity Low_complexity 1 25 0 207 205 0 0 chr5 29212133 29212172 -170417978 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 32 62 0 0 chr5 29215595 29215643 -170414507 + GC_rich Low_complexity Low_complexity 1 48 0 24 0 0 0 chr5 29217615 29217639 -170412511 + GC_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr5 29218960 29218985 -170411165 + AT_rich Low_complexity Low_complexity 1 25 0 305 240 188 52 chr5 29219062 29219312 -170410838 + L1 LINE L1 3092 3375 -2771 234 223 29 50 chr5 29219868 29220007 -170410143 + (CACAA)n Simple_repeat Simple_repeat 4 139 0 205 336 23 8 chr5 29220061 29220192 -170409958 + (CATA)n Simple_repeat Simple_repeat 2 134 0 528 361 90 17 chr5 29221362 29221839 -170408311 + HAL1 LINE L1 211 722 -1785 301 337 63 11 chr5 29221929 29222104 -170408046 + HAL1 LINE L1 1295 1478 -1029 459 313 24 37 chr5 29222112 29222358 -170407792 + HAL1 LINE L1 1451 1693 -814 2901 160 32 6 chr5 29222403 29222933 -170407217 - L1MA4 LINE L1 -57 6243 5700 573 220 145 66 chr5 29222933 29223160 -170406990 + MLT2B1 LTR ERVL 11 255 -265 5175 225 114 34 chr5 29223211 29224681 -170405469 + MER52A LTR ERV1 214 1755 0 671 219 16 0 chr5 29224681 29224809 -170405341 + MLT2B1 LTR ERVL 328 457 -63 393 75 0 0 chr5 29224843 29224896 -170405254 + (CA)n Simple_repeat Simple_repeat 2 54 0 2224 173 16 42 chr5 29224906 29225403 -170404747 - LTR22B LTR ERVK -4 488 5 248 182 0 0 chr5 29225421 29225465 -170404685 + MLT2D LTR ERVL 369 412 -2 877 298 85 39 chr5 29225472 29226188 -170403962 + HAL1 LINE L1 1752 2500 -7 1483 129 0 5 chr5 29227253 29227477 -170402673 + LOR1b LTR ERV1 1 223 -238 702 187 0 43 chr5 29227517 29227656 -170402494 - FLAM_C SINE Alu 0 133 1 196 220 100 0 chr5 29227714 29227764 -170402386 - MIR SINE MIR -88 174 120 750 171 54 93 chr5 29227782 29228040 -170402110 + LTR56 LTR ERV1 1 248 -197 690 256 64 8 chr5 29228057 29228291 -170401859 + LTR56 LTR ERV1 199 445 0 902 251 146 69 chr5 29228610 29229208 -170400942 + LTR48B LTR ERV1 1 644 0 23 54 0 0 chr5 29229934 29229971 -170400179 + AT_rich Low_complexity Low_complexity 1 37 0 2345 114 27 11 chr5 29230074 29230443 -170399707 + THE1C LTR MaLR 1 375 0 9459 122 40 40 chr5 29230443 29232024 -170398126 + THE1C-int LTR MaLR 1 1580 0 2314 147 0 18 chr5 29232024 29232406 -170397744 + THE1C LTR MaLR 1 375 0 1433 221 51 39 chr5 29232486 29232875 -170397275 - MSTD LTR MaLR 0 396 3 378 175 26 13 chr5 29233338 29233430 -170396720 - MSTC LTR MaLR -2 411 301 318 50 0 0 chr5 29233440 29233480 -170396670 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr5 29233865 29233886 -170396264 + AT_rich Low_complexity Low_complexity 1 21 0 402 336 15 7 chr5 29234259 29234438 -170395712 + MLT1G1 LTR MaLR 248 356 -186 258 173 0 19 chr5 29234506 29234558 -170395592 + MLT1G1 LTR MaLR 490 540 -2 197 317 78 54 chr5 29234710 29234877 -170395273 + MIR SINE MIR 90 260 -2 413 181 0 0 chr5 29234985 29235057 -170395093 - Tigger1 DNA MER2_type 0 2418 2347 2227 249 62 25 chr5 29235063 29235757 -170394393 + MER50 LTR ERV1 8 727 -7 11952 147 55 38 chr5 29235765 29237552 -170392598 - Tigger1 DNA MER2_type -71 2347 511 1854 172 24 0 chr5 29237552 29237849 -170392301 - AluSx SINE Alu -8 304 1 11952 147 55 38 chr5 29237849 29238364 -170391786 - Tigger1 DNA MER2_type -1907 511 6 2073 219 29 34 chr5 29289769 29290350 -170339800 + L1MB7 LINE L1 5606 6183 -1 308 379 44 20 chr5 29290634 29290882 -170339268 - MIR SINE MIR -8 254 1 24 32 0 0 chr5 29290957 29290988 -170339162 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr5 29291817 29291845 -170338305 + AT_rich Low_complexity Low_complexity 1 28 0 290 259 17 92 chr5 29291878 29292052 -170338098 - L1ME LINE L1 -449 5672 5512 227 317 24 12 chr5 29292264 29292346 -170337804 + MIR SINE MIR 2 84 -178 272 48 24 0 chr5 29293107 29293149 -170337001 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 1339 134 10 14 chr5 29293175 29293384 -170336766 - AluSx SINE Alu -73 239 32 346 86 69 0 chr5 29293400 29293458 -170336692 - AluS SINE Alu -201 102 41 874 307 162 21 chr5 29294002 29294753 -170335397 + L2 LINE L2 2374 3234 -79 24 0 0 0 chr5 29294763 29294787 -170335363 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 29295117 29295139 -170335011 + AT_rich Low_complexity Low_complexity 1 22 0 271 353 0 0 chr5 29295164 29295266 -170334884 - MLT1I LTR MaLR -7 402 301 453 103 0 0 chr5 29295370 29295438 -170334712 + (ATTAG)n Simple_repeat Simple_repeat 3 70 0 23 33 0 0 chr5 29295461 29295491 -170334659 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 29296246 29296269 -170333881 + AT_rich Low_complexity Low_complexity 1 23 0 6031 140 15 0 chr5 29296269 29297876 -170332274 - L1PA11 LINE L1 -23 6151 4522 8320 181 8 3 chr5 29297880 29299489 -170330661 + L1PA11 LINE L1 2892 4508 -1638 212 0 36 0 chr5 29299490 29299518 -170330632 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 234 105 0 0 chr5 29300711 29300749 -170329401 + (CAA)n Simple_repeat Simple_repeat 2 39 0 347 320 75 62 chr5 29301134 29301506 -170328644 + L2 LINE L2 2055 2431 -883 364 266 92 43 chr5 29302198 29302405 -170327745 - HAL1b LINE L1 -1008 340 124 28 48 0 0 chr5 29302410 29302452 -170327698 + AT_rich Low_complexity Low_complexity 1 42 0 192 307 27 27 chr5 29302635 29302710 -170327440 - L2 LINE L2 -1263 2051 1977 778 167 34 6 chr5 29302976 29303207 -170326943 + Tigger2 DNA MER2_type 2442 2717 -1 203 252 155 10 chr5 29303507 29303610 -170326540 + L3 LINE CR1 588 705 -872 2320 235 16 29 chr5 29303737 29304354 -170325796 + L1MB7 LINE L1 5479 6087 -97 303 185 0 15 chr5 29304422 29304487 -170325663 + L1MB8 LINE L1 6106 6169 -9 482 199 46 53 chr5 29304594 29304725 -170325425 + L1MEc LINE L1 462 591 -5454 44 0 0 0 chr5 29304770 29304814 -170325336 + AT_rich Low_complexity Low_complexity 1 44 0 2923 281 40 18 chr5 29305563 29306976 -170323174 + L1MCc LINE L1 1 1798 -4851 797 227 138 44 chr5 29306988 29307708 -170322442 + L1MCc LINE L1 1844 2717 -4224 2653 200 52 2 chr5 29307708 29308227 -170321923 + MER44D DNA MER2_type 1 600 -5 389 231 111 13 chr5 29308246 29308554 -170321596 + L1MCc LINE L1 2752 3131 -3961 1245 214 49 30 chr5 29308561 29308865 -170321285 + MLT2D LTR ERVL 1 310 -104 585 204 0 0 chr5 29308892 29309039 -170321111 + (TA)n Simple_repeat Simple_repeat 1 147 0 1174 291 30 11 chr5 29309208 29309683 -170320467 + L1MCc LINE L1 3130 3613 -3328 24 91 0 0 chr5 29310084 29310150 -170320000 + AT_rich Low_complexity Low_complexity 1 66 0 35 63 0 0 chr5 29310220 29310283 -170319867 + AT_rich Low_complexity Low_complexity 1 63 0 2359 62 3 0 chr5 29311388 29311692 -170318458 - AluY SINE Alu -6 305 1 287 250 54 45 chr5 29311940 29312052 -170318098 + MIR SINE MIR 24 136 -126 311 256 110 54 chr5 29312393 29312729 -170317421 + L1ME3 LINE L1 5625 5979 -183 369 261 76 78 chr5 29312885 29313216 -170316934 + L1MEc LINE L1 1302 1605 -4959 22 0 0 0 chr5 29313279 29313301 -170316849 + AT_rich Low_complexity Low_complexity 1 22 0 369 247 130 55 chr5 29313568 29314180 -170315970 + L1MEc LINE L1 2381 2995 -3569 25 0 0 0 chr5 29314216 29314241 -170315909 + AT_rich Low_complexity Low_complexity 1 25 0 1979 148 0 0 chr5 29314806 29315110 -170315040 + AluSx SINE Alu 1 304 -8 24 67 0 0 chr5 29315727 29315772 -170314378 + AT_rich Low_complexity Low_complexity 1 45 0 234 309 46 18 chr5 29315790 29316007 -170314143 + L1MEc LINE L1 4136 4358 -2206 12203 108 20 26 chr5 29316007 29318290 -170311860 + MER41B-int LTR ERV1 2994 5945 -1 3144 110 90 0 chr5 29318291 29318791 -170311359 + MER41B LTR ERV1 3 547 -88 376 238 29 29 chr5 29318882 29318987 -170311163 + L1MEc LINE L1 4438 4542 -2022 452 288 161 13 chr5 29319089 29319461 -170310689 + L1MEc LINE L1 4983 5409 -1155 1304 245 69 58 chr5 29321464 29322211 -170307939 - L1ME1 LINE L1 -163 6397 5589 798 279 60 17 chr5 29322311 29322862 -170307288 - L1ME1 LINE L1 -3718 2822 2249 1953 143 3 13 chr5 29324622 29324937 -170305213 + AluSx SINE Alu 1 312 0 200 196 0 18 chr5 29326207 29326263 -170303887 + (CATA)n Simple_repeat Simple_repeat 2 56 0 2675 170 11 5 chr5 29326445 29326881 -170303269 - Tigger2 DNA MER2_type 0 2718 2280 304 201 18 0 chr5 29326881 29326950 -170303200 - Tigger2 DNA MER2_type -2656 62 1 29 90 0 0 chr5 29327198 29327276 -170302874 + AT_rich Low_complexity Low_complexity 1 78 0 2382 68 0 0 chr5 29327292 29327587 -170302563 + AluY SINE Alu 1 295 -16 1573 183 62 32 chr5 29328172 29328510 -170301640 + MER7A DNA MER2_type 1 346 0 253 276 0 82 chr5 29328563 29328661 -170301489 + L1ME3 LINE L1 5477 5566 -600 1567 230 28 19 chr5 29328679 29329143 -170301007 - L1MA9 LINE L1 -37 6275 5817 2011 95 0 37 chr5 29329143 29329439 -170300711 - AluSg SINE Alu -12 298 14 1567 230 28 19 chr5 29329439 29330025 -170300125 - L1MA9 LINE L1 -495 5817 5104 219 170 21 0 chr5 29330654 29330701 -170299449 + (CA)n Simple_repeat Simple_repeat 1 48 0 1191 170 9 22 chr5 29331933 29332156 -170297994 - MSTA LTR MaLR -2 426 207 1032 231 23 11 chr5 29332154 29332414 -170297736 - MSTB LTR MaLR -163 263 1 * 2423 119 6 6 chr5 29332632 29332994 -170297156 - THE1B LTR MaLR -2 362 1 784 341 54 20 chr5 29333240 29333779 -170296371 + L1MCc LINE L1 -490 66 -5842 848 289 97 49 chr5 29333898 29334528 -170295622 + L1MCc LINE L1 293 952 -4956 260 248 115 0 chr5 29334633 29334746 -170295404 + L1MCc LINE L1 1201 1326 -5100 39 60 0 0 chr5 29334834 29334901 -170295249 + AT_rich Low_complexity Low_complexity 1 67 0 361 279 66 37 chr5 29334957 29335249 -170294901 + L1MCc LINE L1 1421 1932 -4675 1304 211 25 18 chr5 29335538 29335818 -170294332 + AluJo SINE Alu 1 282 -30 290 272 44 80 chr5 29335967 29336217 -170293933 - L1MC/D LINE L1 -2148 5660 5420 22 35 0 0 chr5 29336556 29336585 -170293565 + AT_rich Low_complexity Low_complexity 1 29 0 1070 228 49 26 chr5 29336628 29336935 -170293215 + L1ME3 LINE L1 5625 5938 -224 432 261 14 19 chr5 29336944 29337113 -170293037 + L1MA10 LINE L1 5988 6316 -18 216 97 0 0 chr5 29338752 29338783 -170291367 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 2184 81 40 0 chr5 29339024 29339320 -170290830 - AluY SINE Alu -3 308 1 310 317 10 0 chr5 29339436 29339540 -170290610 + (TATG)n Simple_repeat Simple_repeat 3 107 0 29 0 0 0 chr5 29339639 29339668 -170290482 + AT_rich Low_complexity Low_complexity 1 29 0 192 77 0 0 chr5 29339685 29339711 -170290439 + (TTATA)n Simple_repeat Simple_repeat 4 29 0 27 49 0 0 chr5 29340455 29340496 -170289654 + AT_rich Low_complexity Low_complexity 1 41 0 296 185 64 19 chr5 29341179 29341336 -170288814 + (TA)n Simple_repeat Simple_repeat 2 165 0 1807 189 14 3 chr5 29341383 29341727 -170288423 + MER7A DNA MER2_type 1 346 0 271 338 28 21 chr5 29342388 29342530 -170287620 + MER5A DNA MER1_type 9 151 -38 2153 112 0 0 chr5 29342682 29342976 -170287174 - AluSg1 SINE Alu -15 294 1 1219 244 60 55 chr5 29343011 29343413 -170286737 - MER92A LTR ERV1 -8 404 1 30 27 0 0 chr5 29343460 29343497 -170286653 + AT_rich Low_complexity Low_complexity 1 37 0 897 239 34 10 chr5 29343676 29343881 -170286269 - MLT1H LTR MaLR -274 275 66 2868 155 39 109 chr5 29345974 29346646 -170283504 + MER51A LTR ERV1 1 625 -9 309 350 120 39 chr5 29346745 29347128 -170283022 + L2 LINE L2 2900 3313 0 2066 109 169 11 chr5 29347266 29347634 -170282516 + MSTA LTR MaLR 3 428 0 1955 219 23 10 chr5 29347895 29348374 -170281776 + MER31A LTR ERV1 1 485 0 22 0 0 0 chr5 29348388 29348410 -170281740 + AT_rich Low_complexity Low_complexity 1 22 0 226 282 13 13 chr5 29349298 29349376 -170280774 + MIR SINE MIR 66 143 -119 299 295 74 9 chr5 29349466 29349683 -170280467 + L1M4 LINE L1 4116 4346 -1800 23 0 0 0 chr5 29349834 29349857 -170280293 + AT_rich Low_complexity Low_complexity 1 23 0 375 183 78 26 chr5 29349873 29349988 -170280162 + L1M4 LINE L1 4598 4718 -1428 613 337 42 29 chr5 29351410 29351787 -170278363 + HERV16 LTR ERVL 2116 2497 -2499 22 70 0 0 chr5 29352839 29352882 -170277268 + AT_rich Low_complexity Low_complexity 1 43 0 716 206 67 75 chr5 29353393 29353761 -170276389 + LTR21B LTR ERV1 28 438 0 9168 210 31 34 chr5 29353761 29357884 -170272266 + HERVFH21 LTR ERV1 1 3970 -2559 2952 294 27 41 chr5 29358020 29359436 -170270714 + HERVFH21 LTR ERV1 5354 6529 0 621 214 78 48 chr5 29359455 29359814 -170270336 + LTR21B LTR ERV1 28 438 0 2852 13 0 0 chr5 29359923 29360241 -170269909 + AluYb8 SINE Alu 1 318 0 2982 278 104 48 chr5 29360653 29361475 -170268675 + L1MB7 LINE L1 15 790 -5856 297 68 0 0 chr5 29361475 29361519 -170268631 + (CA)n Simple_repeat Simple_repeat 1 44 0 2982 278 104 48 chr5 29361519 29362654 -170267496 + L1MB7 LINE L1 790 2096 -4550 1194 245 46 14 chr5 29362682 29363071 -170267079 - L1MB5 LINE L1 -8 6166 5764 3839 263 46 46 chr5 29363257 29365150 -170265000 + L1MB7 LINE L1 2536 4426 -2218 2337 101 0 0 chr5 29365150 29365457 -170264693 - AluSx SINE Alu -5 307 1 3839 263 46 46 chr5 29365457 29365674 -170264476 + L1MB7 LINE L1 4426 4642 -2002 773 274 68 3 chr5 29365676 29365968 -170264182 + L1MB7 LINE L1 5367 5677 -967 9523 208 78 7 chr5 29365971 29368984 -170261166 + L1M1 LINE L1 24 2666 -4899 2237 141 8 19 chr5 29368984 29369360 -170260790 + THE1C LTR MaLR 1 372 -3 9523 208 78 7 chr5 29369360 29369514 -170260636 + L1M1 LINE L1 2666 2808 -4757 3752 236 41 54 chr5 29369518 29372419 -170257731 + L1MA6 LINE L1 2097 4813 -2752 7074 185 41 12 chr5 29372422 29374962 -170255188 + L1MA6 LINE L1 5100 7707 -12 435 190 28 45 chr5 29374962 29375141 -170255009 + (TATAA)n Simple_repeat Simple_repeat 5 180 0 3339 230 48 9 chr5 29375149 29376103 -170254047 + L1MB7 LINE L1 5686 6674 -8 868 245 21 0 chr5 29376279 29376467 -170253683 - MLT1A1 LTR MaLR 0 365 174 392 176 0 27 chr5 29376475 29376549 -170253601 - MLT1A1 LTR MaLR -356 72 1 27 0 0 0 chr5 29377245 29377272 -170252878 + AT_rich Low_complexity Low_complexity 1 27 0 2077 114 6 9 chr5 29377306 29377630 -170252520 - L1MA2 LINE L1 0 6304 5982 230 246 16 0 chr5 29379063 29379124 -170251026 + (TG)n Simple_repeat Simple_repeat 1 62 0 2626 241 18 7 chr5 29379244 29379924 -170250226 + L1MB1 LINE L1 4406 5092 -1054 1566 188 33 11 chr5 29379940 29380308 -170249842 + L1MB1 LINE L1 5791 6166 -2 262 156 65 13 chr5 29380598 29380675 -170249475 + Charlie6 DNA MER1_type 2806 2886 -614 2624 188 11 6 chr5 29380941 29381409 -170248741 - MER70A LTR ERVL 0 472 3 2171 121 0 3 chr5 29381757 29382055 -170248095 - AluSg SINE Alu -5 305 9 736 203 14 0 chr5 29383156 29383299 -170246851 - AluSg/x SINE Alu -13 299 155 273 196 0 0 chr5 29383636 29383692 -170246458 + (TA)n Simple_repeat Simple_repeat 1 56 0 2822 170 20 7 chr5 29383853 29384394 -170245756 + L1MA4 LINE L1 5742 6289 -11 265 299 21 21 chr5 29385529 29385626 -170244524 + MER69 DNA AcHobo 48 144 -1082 398 200 80 0 chr5 29386422 29386522 -170243628 - MLT1H LTR MaLR -3 546 439 275 279 217 0 chr5 29386642 29386771 -170243379 - MLT1H1 LTR MaLR -341 214 58 * 398 256 60 0 chr5 29386743 29386860 -170243290 - MLT1H LTR MaLR -421 128 5 1153 250 21 62 chr5 29386929 29387317 -170242833 + MLT1A2 LTR MaLR 1 372 -2 286 0 91 0 chr5 29387526 29387570 -170242580 + T-rich Low_complexity Low_complexity 4 51 0 1827 152 0 3 chr5 29387581 29387871 -170242279 - AluSx SINE Alu -23 289 1 1702 222 41 3 chr5 29387966 29388387 -170241763 - L1MB7 LINE L1 0 6184 5745 246 275 0 25 chr5 29388379 29388403 -170241747 - L1MA10 LINE L1 -77 6257 6234 * 497 239 46 95 chr5 29388403 29388666 -170241484 - L1ME1 LINE L1 -92 6074 5825 28 95 0 0 chr5 29388666 29388750 -170241400 + AT_rich Low_complexity Low_complexity 1 84 0 335 169 16 12 chr5 29388758 29388845 -170241305 - L1ME1 LINE L1 -354 5812 5724 1281 258 33 10 chr5 29389016 29389411 -170240739 + L1ME1 LINE L1 5747 6150 -16 320 298 60 13 chr5 29389426 29389661 -170240489 + L1M4 LINE L1 4314 4559 -1587 33 56 0 0 chr5 29389712 29389766 -170240384 + AT_rich Low_complexity Low_complexity 1 54 0 995 176 87 128 chr5 29390221 29390353 -170239797 + AluJo SINE Alu 4 140 -162 1937 139 0 16 chr5 29390353 29390663 -170239487 + AluSq SINE Alu 9 313 0 995 176 87 128 chr5 29390663 29390677 -170239473 + AluJo SINE Alu 140 153 -149 195 69 0 0 chr5 29390677 29390706 -170239444 + (CCAA)n Simple_repeat Simple_repeat 4 32 0 995 176 87 128 chr5 29390706 29390870 -170239280 + AluJo SINE Alu 153 302 0 28 48 0 0 chr5 29391474 29391516 -170238634 + AT_rich Low_complexity Low_complexity 1 42 0 433 250 8 53 chr5 29391558 29391802 -170238348 - L1MC5 LINE L1 -124 7837 7605 379 341 89 20 chr5 29392000 29392393 -170237757 + L1MEd LINE L1 786 1205 -5000 1465 183 61 4 chr5 29392433 29392712 -170237438 + AluJb SINE Alu 7 301 -11 1955 70 60 7 chr5 29392825 29393109 -170237041 + AluY SINE Alu 1 299 -12 313 338 27 0 chr5 29393291 29393439 -170236711 + L1MEd LINE L1 1544 1695 -4701 434 333 36 28 chr5 29393757 29394087 -170236063 + L1MEd LINE L1 2167 2458 -3757 1987 117 3 3 chr5 29394437 29394736 -170235414 + AluSc SINE Alu 1 299 -10 180 0 0 0 chr5 29394789 29394809 -170235341 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 636 272 103 57 chr5 29395067 29396001 -170234149 + L1M4 LINE L1 3871 4847 -1299 808 226 36 5 chr5 29396272 29396467 -170233683 - MER20 DNA MER1_type -18 201 1 266 106 0 43 chr5 29396849 29396896 -170233254 + L1ME3A LINE L1 5907 5951 -211 240 281 50 66 chr5 29396956 29397077 -170233073 + L1ME3A LINE L1 5962 6080 -90 227 241 30 83 chr5 29397136 29397269 -170232881 - L1ME4a LINE L1 -57 6064 5939 339 167 21 10 chr5 29397543 29397639 -170232511 + (TA)n Simple_repeat Simple_repeat 2 98 0 25 75 0 0 chr5 29397672 29397725 -170232425 + AT_rich Low_complexity Low_complexity 1 53 0 22 70 0 0 chr5 29398082 29398125 -170232025 + AT_rich Low_complexity Low_complexity 1 43 0 443 254 127 8 chr5 29398749 29398875 -170231275 + Tigger7 DNA MER2_type 20 160 -545 523 147 83 18 chr5 29398894 29399003 -170231147 + Tigger7 DNA MER2_type 2209 2324 -163 654 162 136 13 chr5 29399268 29399422 -170230728 + Tigger7 DNA MER2_type 2413 2585 -2 21 36 0 0 chr5 29400621 29400649 -170229501 + AT_rich Low_complexity Low_complexity 1 28 0 1187 227 30 57 chr5 29400742 29401108 -170229042 + MLT1A1 LTR MaLR 10 365 0 2198 238 72 27 chr5 29401108 29401865 -170228285 + MLT1A1-int LTR MaLR 1 883 -488 2059 188 22 20 chr5 29402215 29402624 -170227526 + MLT1A1-int LTR MaLR 1326 1735 0 1249 220 38 59 chr5 29402624 29402681 -170227469 + MLT1A1 LTR MaLR 1 58 -307 2352 43 4 0 chr5 29402681 29402960 -170227190 - AluYb8 SINE Alu 0 318 39 1249 220 38 59 chr5 29402960 29403275 -170226875 + MLT1A1 LTR MaLR 58 365 0 596 206 73 0 chr5 29403514 29403679 -170226471 - L1MA7 LINE L1 -3 6288 6112 * 785 190 25 50 chr5 29403669 29403869 -170226281 + L1MA7 LINE L1 5931 6125 -166 776 240 17 0 chr5 29405498 29405673 -170224477 + MSTD LTR MaLR 219 396 0 1309 152 33 84 chr5 29405688 29406023 -170224127 - L1PB4 LINE L1 -301 5855 5538 * 2494 192 11 51 chr5 29406016 29406870 -170223280 + L1PB4 LINE L1 4731 5543 -613 2418 114 11 19 chr5 29407285 29407663 -170222487 + THE1C LTR MaLR 1 375 0 4384 203 72 13 chr5 29407673 29407798 -170222352 - L1PB4 LINE L1 -725 5429 5313 234 0 0 0 chr5 29407798 29407824 -170222326 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 4384 203 72 13 chr5 29407824 29408693 -170221457 - L1PB4 LINE L1 -841 5313 4369 198 0 0 0 chr5 29408693 29408715 -170221435 + (TG)n Simple_repeat Simple_repeat 1 22 0 4384 203 72 13 chr5 29408715 29408912 -170221238 - L1PB4 LINE L1 -1785 4369 4185 21 0 0 0 chr5 29408939 29408960 -170221190 + AT_rich Low_complexity Low_complexity 1 21 0 246 302 66 50 chr5 29409457 29409639 -170220511 - L2 LINE L2 -2 3311 3127 541 320 189 36 chr5 29409784 29410341 -170219809 - L2 LINE L2 -437 2877 2236 236 196 0 36 chr5 29410367 29410423 -170219727 + L1P4 LINE L1 5519 5572 -602 230 149 0 0 chr5 29410988 29411035 -170219115 - LTR66 LTR ERVL -170 440 394 390 380 10 10 chr5 29411049 29411257 -170218893 + L1ME3 LINE L1 5683 5890 -272 2150 94 3 3 chr5 29411271 29411558 -170218592 - AluSq SINE Alu -22 291 5 1733 122 107 4 chr5 29412021 29412292 -170217858 - AluSq SINE Alu -14 299 1 2057 125 0 51 chr5 29412292 29412645 -170217505 - L1PA13 LINE L1 -4 6159 5825 1850 133 27 10 chr5 29412743 29413044 -170217106 + AluSx SINE Alu 1 306 -6 314 300 50 25 chr5 29413513 29413633 -170216517 - L2 LINE L2 -219 3053 2931 1513 160 219 17 chr5 29413726 29414082 -170216068 + MSTA LTR MaLR 1 428 0 42 36 0 0 chr5 29414538 29414594 -170215556 + AT_rich Low_complexity Low_complexity 1 56 0 339 320 141 30 chr5 29414596 29414830 -170215320 - MIR SINE MIR 0 262 3 902 329 69 27 chr5 29414873 29415622 -170214528 - L2 LINE L2 -18 3295 2433 307 257 6 18 chr5 29419787 29419899 -170210251 + L1ME LINE L1 5725 5832 -338 245 50 0 25 chr5 29419950 29419990 -170210160 + (TA)n Simple_repeat Simple_repeat 2 40 0 204 154 46 15 chr5 29420160 29420225 -170209925 + (TTATA)n Simple_repeat Simple_repeat 2 68 0 257 254 45 0 chr5 29420531 29420598 -170209552 - L1ME3A LINE L1 -17 6153 6084 300 186 0 0 chr5 29420690 29420749 -170209401 + (TG)n Simple_repeat Simple_repeat 1 59 0 247 250 0 0 chr5 29420790 29420846 -170209304 + (TG)n Simple_repeat Simple_repeat 1 56 0 687 271 142 57 chr5 29420850 29421377 -170208773 - L1ME3A LINE L1 -282 5888 5317 342 280 82 24 chr5 29421841 29422048 -170208102 - L1ME3A LINE L1 -1481 4665 4447 449 325 124 43 chr5 29422096 29422251 -170207899 - L1ME3A LINE L1 -1777 4369 4228 2866 6 0 6 chr5 29422251 29422571 -170207579 - AluYb8 SINE Alu 0 318 1 449 325 124 43 chr5 29422571 29423043 -170207107 - L1ME3A LINE L1 -1918 4228 3691 25 0 0 0 chr5 29424086 29424111 -170206039 + AT_rich Low_complexity Low_complexity 1 25 0 350 280 40 0 chr5 29424810 29424910 -170205240 - MIR SINE MIR -29 233 130 2369 103 0 0 chr5 29425329 29425664 -170204486 - AluSx SINE Alu 0 335 1 700 267 82 54 chr5 29425772 29426170 -170203980 - L1ME LINE L1 -397 5765 5336 290 261 93 40 chr5 29426313 29426539 -170203611 - L1ME LINE L1 -943 5203 4966 2371 97 7 0 chr5 29426556 29426866 -170203284 - AluSx SINE Alu 0 312 1 23 54 0 0 chr5 29427660 29427697 -170202453 + AT_rich Low_complexity Low_complexity 1 37 0 2353 48 0 83 chr5 29427697 29428033 -170202117 - AluY SINE Alu -3 308 1 56 42 0 11 chr5 29428135 29428159 -170201991 + AT_rich Low_complexity Low_complexity 1 24 -70 1961 159 0 10 chr5 29428159 29428468 -170201682 + AluSx SINE Alu 1 306 -6 56 42 0 11 chr5 29428468 29428538 -170201612 + AT_rich Low_complexity Low_complexity 24 94 0 1792 138 34 20 chr5 29429425 29429723 -170200427 + AluSq SINE Alu 1 302 -11 1222 211 40 115 chr5 29430718 29430936 -170199214 + MLT1D LTR MaLR 12 245 -260 2559 44 0 25 chr5 29430936 29431255 -170198895 + AluY SINE Alu 1 311 0 1222 211 40 115 chr5 29431255 29431566 -170198584 + MLT1D LTR MaLR 245 501 -4 1435 180 93 85 chr5 29434071 29434286 -170195864 - MLT1C LTR MaLR -3 464 252 207 0 0 0 chr5 29434286 29434309 -170195841 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1977 136 0 4 chr5 29434312 29434592 -170195558 - AluSg SINE Alu -31 279 1 1435 180 93 85 chr5 29434592 29434691 -170195459 - MLT1C LTR MaLR -216 251 154 2043 181 36 59 chr5 29434691 29435217 -170194933 - MER67D LTR ERV1 0 514 1 1435 180 93 85 chr5 29435217 29435357 -170194793 - MLT1C LTR MaLR -313 154 1 1475 187 7 49 chr5 29435838 29436143 -170194007 + AluJo SINE Alu 1 292 -20 21 0 0 0 chr5 29436675 29436696 -170193454 + AT_rich Low_complexity Low_complexity 1 21 0 3243 61 42 9 chr5 29437464 29437510 -170192640 - MLT2A1 LTR ERVL 0 444 401 252 0 0 0 chr5 29437510 29437538 -170192612 + (TA)n Simple_repeat Simple_repeat 2 29 0 3243 61 42 9 chr5 29437538 29437919 -170192231 - MLT2A1 LTR ERVL -43 401 3 254 361 162 0 chr5 29437921 29438112 -170192038 - MIR SINE MIR 0 262 41 2126 90 50 10 chr5 29438720 29439020 -170191130 + AluSq SINE Alu 1 312 -1 2711 156 67 27 chr5 29439208 29439772 -170190378 - L1MB1 LINE L1 -14 6175 5589 22 56 0 0 chr5 29440454 29440490 -170189660 + AT_rich Low_complexity Low_complexity 1 36 0 1422 184 26 48 chr5 29441161 29441470 -170188680 + AluJo SINE Alu 1 302 0 206 192 19 0 chr5 29441517 29441569 -170188581 + (TG)n Simple_repeat Simple_repeat 2 54 0 28 48 0 0 chr5 29441799 29441841 -170188309 + AT_rich Low_complexity Low_complexity 1 42 0 1973 175 39 24 chr5 29441986 29442368 -170187782 + MER61D LTR ERV1 114 501 0 16225 197 23 31 chr5 29443254 29447390 -170182760 + L1PA15-16 LINE L1 5 4121 -2728 281 116 14 87 chr5 29447383 29447452 -170182698 + L1PA13 LINE L1 6102 6165 -1 * 645 315 87 28 chr5 29448177 29448691 -170181459 + L2 LINE L2 2528 3082 -231 23161 27 1 21 chr5 29449453 29452462 -170177688 - L1PA2 LINE L1 -1270 4876 1926 7790 16 0 6 chr5 29452462 29453771 -170176379 + L1PA2 LINE L1 4851 6154 -1 21 36 0 0 chr5 29454295 29454323 -170175827 + AT_rich Low_complexity Low_complexity 1 28 0 249 57 0 0 chr5 29454422 29454457 -170175693 + (CA)n Simple_repeat Simple_repeat 2 36 0 1851 159 48 36 chr5 29454484 29454842 -170175308 - THE1B LTR MaLR -2 362 1 6067 106 11 7 chr5 29455321 29457312 -170172838 - L1PA12 LINE L1 0 6819 4818 207 0 0 0 chr5 29457312 29457335 -170172815 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2171 82 7 0 chr5 29457335 29457616 -170172534 - AluY SINE Alu -28 283 1 2268 84 3 0 chr5 29457849 29458136 -170172014 - AluY SINE Alu -23 288 1 6749 234 13 16 chr5 29458136 29459871 -170170279 - L1PA12 LINE L1 -1971 4826 3098 1011 205 17 17 chr5 29459875 29460114 -170170036 - L1P LINE L1 -1668 4478 4240 312 91 0 0 chr5 29460124 29460168 -170169982 + (TA)n Simple_repeat Simple_repeat 2 45 0 10213 222 74 25 chr5 29460168 29463129 -170167021 - L1PA12 LINE L1 -3704 3093 1 2424 73 7 0 chr5 29463708 29464009 -170166141 + AluY SINE Alu 1 303 -8 970 294 52 25 chr5 29464469 29464837 -170165313 + LTR16C LTR ERVL 112 489 -2 1999 118 3 19 chr5 29465460 29465774 -170164376 + AluY SINE Alu 1 309 -2 34 24 0 0 chr5 29466759 29466800 -170163350 + AT_rich Low_complexity Low_complexity 1 41 0 1965 342 67 52 chr5 29467197 29468872 -170161278 + ERVL LTR ERVL 1782 3432 -2332 1522 191 0 66 chr5 29468872 29469191 -170160959 + AluJb SINE Alu 6 303 -9 1965 342 67 52 chr5 29469191 29469207 -170160943 + ERVL LTR ERVL 3432 3446 -2318 2187 188 19 37 chr5 29469207 29469671 -170160479 - MSTB2 LTR MaLR -1 456 1 1965 342 67 52 chr5 29469671 29470111 -170160039 + ERVL LTR ERVL 3446 3944 -1820 2126 149 25 6 chr5 29471177 29471533 -170158617 + THE1B LTR MaLR 1 363 -1 21 71 0 0 chr5 29472052 29472094 -170158056 + AT_rich Low_complexity Low_complexity 1 42 0 308 156 0 26 chr5 29472350 29472427 -170157723 + (TAGA)n Simple_repeat Simple_repeat 3 77 0 213 269 0 0 chr5 29472921 29472973 -170157177 + (TG)n Simple_repeat Simple_repeat 1 52 0 2148 172 36 19 chr5 29473047 29473466 -170156684 + MSTB LTR MaLR 1 426 0 1292 237 51 88 chr5 29473471 29474072 -170156078 + MLT1E2 LTR MaLR 72 624 -2 256 346 92 29 chr5 29474148 29474388 -170155762 + MIR SINE MIR 6 260 -2 275 328 60 0 chr5 29475095 29475229 -170154921 - MER5B DNA MER1_type -30 148 7 27 0 0 0 chr5 29476189 29476216 -170153934 + AT_rich Low_complexity Low_complexity 1 27 0 1913 163 0 0 chr5 29476577 29476878 -170153272 - AluJb SINE Alu -11 301 1 301 241 293 0 chr5 29477030 29477146 -170153004 - MIR SINE MIR -56 206 57 885 277 76 38 chr5 29477377 29477720 -170152430 + MER57A LTR ERV1 42 397 -6 1223 251 77 69 chr5 29477836 29478447 -170151703 + L1M4 LINE L1 2440 3064 -3082 1874 134 6 22 chr5 29478447 29478761 -170151389 + AluSc SINE Alu 1 309 0 1223 251 77 69 chr5 29478761 29479219 -170150931 + L1M4 LINE L1 3064 3517 -2629 264 200 25 50 chr5 29479241 29479321 -170150829 + L1P LINE L1 3600 3677 -2469 813 250 103 25 chr5 29480037 29480433 -170149717 + L1M4 LINE L1 3673 4099 -2047 348 244 64 35 chr5 29480467 29480639 -170149511 + L1M4 LINE L1 4244 4420 -1726 297 252 50 25 chr5 29480711 29480870 -170149280 + L1M4 LINE L1 4590 4752 -1394 1081 217 114 44 chr5 29482556 29482897 -170147253 - MLT1A1 LTR MaLR 0 365 1 1055 246 60 63 chr5 29483010 29483457 -170146693 + MER39 LTR ERV1 244 689 -18 201 316 41 31 chr5 29484316 29484414 -170145736 - L2 LINE L2 -1017 2297 2199 571 196 245 20 chr5 29484911 29485115 -170145035 - MIR SINE MIR -10 252 3 260 265 12 0 chr5 29485370 29485453 -170144697 + (CATATA)n Simple_repeat Simple_repeat 1 84 0 1261 285 46 53 chr5 29485604 29486246 -170143904 + HsTC2a DNA Tc2 14 652 -1248 2089 79 0 60 chr5 29486246 29486587 -170143563 - AluY SINE Alu 0 311 1 1261 285 46 53 chr5 29486587 29486677 -170143473 + HsTC2a DNA Tc2 652 741 -3 182 118 29 0 chr5 29487736 29487770 -170142380 + CT-rich Low_complexity Low_complexity 2 36 0 752 183 65 21 chr5 29489490 29489676 -170140474 + L1MCc LINE L1 41 234 -6189 529 300 52 54 chr5 29489765 29490249 -170139901 + L1MCc LINE L1 1006 1488 -4935 283 303 52 61 chr5 29490262 29490283 -170139867 + L1MCc LINE L1 1505 1525 -5416 13097 41 1 1 chr5 29490283 29492661 -170137489 + L1PA4 LINE L1 3775 6153 -2 283 303 52 61 chr5 29492661 29493270 -170136880 + L1MCc LINE L1 1525 2128 -4813 311 289 102 33 chr5 29493311 29493760 -170136390 + L1MCc LINE L1 2387 2866 -4256 317 317 74 22 chr5 29493794 29494160 -170135990 + L1MCc LINE L1 2999 3383 -3558 1922 173 39 63 chr5 29494209 29494248 -170135902 - MSTB LTR MaLR 0 426 388 1723 162 10 3 chr5 29494248 29494538 -170135612 + AluSx SINE Alu 1 292 -20 1922 173 39 63 chr5 29494538 29494909 -170135241 - MSTB LTR MaLR -38 388 26 537 244 76 50 chr5 29494915 29495329 -170134821 + L1MCc LINE L1 3507 3939 -3002 2011 114 20 27 chr5 29495329 29495627 -170134523 + AluSc SINE Alu 1 296 -13 537 244 76 50 chr5 29495627 29495737 -170134413 + L1MCc LINE L1 3939 4045 -2896 3594 198 29 3 chr5 29495770 29496487 -170133663 - L1PA16 LINE L1 -16 6150 5415 * 8429 223 84 55 chr5 29496479 29499486 -170130664 - L1 LINE L1 -752 6097 3003 36057 97 12 8 chr5 29499495 29505620 -170124530 - L1PA6 LINE L1 -2 6152 11 739 171 36 17 chr5 29505597 29505803 -170124347 - L1PA15-16 LINE L1 -3820 2326 2118 * 1607 218 6 0 chr5 29505793 29506109 -170124041 - L1PA15-16 LINE L1 -4229 2620 2303 448 275 7 0 chr5 29506111 29506249 -170123901 + L1 LINE L1 3346 3484 -2662 1095 270 14 3 chr5 29506262 29506606 -170123544 - L1PA15-16 LINE L1 -4560 2289 1942 401 351 89 56 chr5 29507434 29507950 -170122200 - L1PA15-16 LINE L1 -6175 664 132 904 172 73 34 chr5 29508089 29508293 -170121857 - L1MA7 LINE L1 -171 6120 5909 748 183 35 0 chr5 29508293 29508462 -170121688 + L1MA7 LINE L1 6113 6287 -4 1186 271 82 20 chr5 29508467 29509080 -170121070 + L1M4 LINE L1 4327 4977 -1169 351 291 82 69 chr5 29509161 29509525 -170120625 - L1M4 LINE L1 -786 5360 4992 1785 164 40 30 chr5 29510830 29511201 -170118949 - THE1C LTR MaLR 0 375 1 8900 147 11 36 chr5 29511201 29512818 -170117332 - THE1C-int LTR MaLR 0 1580 4 1382 192 54 40 chr5 29512822 29513192 -170116958 - THE1C LTR MaLR 0 375 1 591 282 102 29 chr5 29513583 29513828 -170116322 - MLT1D LTR MaLR -3 502 240 1795 228 71 9 chr5 29513832 29514253 -170115897 + LOR1b LTR ERV1 11 457 -4 530 227 45 91 chr5 29514257 29514499 -170115651 - MLT1D LTR MaLR -272 233 3 5039 185 43 8 chr5 29514759 29515862 -170114288 - L1MA5 LINE L1 -2 7319 6181 219 36 0 0 chr5 29515862 29515890 -170114260 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 2026 118 0 0 chr5 29515890 29516170 -170113980 - AluY SINE Alu -28 283 4 6596 239 94 15 chr5 29516181 29518573 -170111577 - L1MA5 LINE L1 -2377 4790 1969 1474 211 3 0 chr5 29518573 29518862 -170111288 - AluJo SINE Alu -20 292 3 6596 239 94 15 chr5 29518862 29520247 -170109903 - L1MA5 LINE L1 -5198 1969 695 434 343 6 39 chr5 29520255 29520433 -170109717 - L1MA5 LINE L1 -6333 835 664 21 57 0 0 chr5 29520673 29520708 -170109442 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 29520763 29520791 -170109359 + AT_rich Low_complexity Low_complexity 1 28 0 414 0 0 0 chr5 29521307 29521353 -170108797 + (CA)n Simple_repeat Simple_repeat 2 47 0 4876 182 29 13 chr5 29521734 29523036 -170107114 + L1PA16 LINE L1 4833 6157 -9 21 0 0 0 chr5 29523036 29523057 -170107093 + AT_rich Low_complexity Low_complexity 1 21 0 1377 202 52 3 chr5 29523070 29523357 -170106793 + MLT2D LTR ERVL 9 309 -105 251 355 27 0 chr5 29523382 29523492 -170106658 + MLT1I LTR MaLR 26 138 -271 328 275 64 0 chr5 29523617 29523726 -170106424 + MLT1I LTR MaLR 294 409 0 278 375 64 27 chr5 29523787 29524269 -170105881 + ERVL LTR ERVL 1506 2005 -3759 195 42 0 0 chr5 29524426 29524450 -170105700 + (TA)n Simple_repeat Simple_repeat 2 25 0 836 281 40 16 chr5 29524583 29524836 -170105314 + ERVL LTR ERVL 2272 2530 -3124 279 354 49 22 chr5 29525195 29525418 -170104732 + ERVL LTR ERVL 2857 3085 -2569 1683 6 0 0 chr5 29526167 29526350 -170103800 - AluYa5 SINE Alu -128 183 1 333 347 33 49 chr5 29526592 29527042 -170103108 - L1M4 LINE L1 -2691 3455 3013 21 0 0 0 chr5 29527226 29527247 -170102903 + AT_rich Low_complexity Low_complexity 1 21 0 297 211 39 44 chr5 29527353 29527533 -170102617 + (TA)n Simple_repeat Simple_repeat 2 180 0 492 272 84 10 chr5 29527743 29527945 -170102205 + L1MD3 LINE L1 6990 7206 -789 442 246 31 0 chr5 29527952 29528082 -170102068 + MLT1F1 LTR MaLR 1 134 -433 1433 243 103 7 chr5 29528082 29528501 -170101649 + L1MD3 LINE L1 7411 7869 -126 2260 113 8 31 chr5 29528773 29529126 -170101024 - THE1B LTR MaLR -19 345 1 218 300 14 0 chr5 29529837 29529907 -170100243 + GA-rich Low_complexity Low_complexity 1 71 0 1719 190 10 70 chr5 29530609 29531024 -170099126 + MLT1B LTR MaLR 1 390 0 750 140 0 0 chr5 29531639 29531753 -170098397 - AluSp/q SINE Alu -12 301 188 2004 141 0 3 chr5 29531831 29532137 -170098013 - AluSx SINE Alu -7 305 1 206 250 11 68 chr5 29532281 29532369 -170097781 - MIR SINE MIR -56 206 124 22 35 0 0 chr5 29532905 29532934 -170097216 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 29533379 29533400 -170096750 + AT_rich Low_complexity Low_complexity 1 21 0 211 313 123 31 chr5 29533551 29533746 -170096404 + MIR SINE MIR 48 260 -2 1952 62 0 33 chr5 29534086 29534360 -170095790 - L1PA7 LINE L1 0 6154 5890 409 358 48 60 chr5 29534435 29534840 -170095310 - L2 LINE L2 -148 3165 2768 268 337 32 0 chr5 29534848 29534943 -170095207 + MIR SINE MIR 1 98 -164 204 211 0 0 chr5 29535673 29535711 -170094439 + (CA)n Simple_repeat Simple_repeat 2 39 0 384 325 106 56 chr5 29536123 29536480 -170093670 + L1MEd LINE L1 407 781 -5338 318 349 59 21 chr5 29536635 29536873 -170093277 + HAL1 LINE L1 195 441 -2066 2243 127 3 0 chr5 29536876 29537200 -170092950 + L1PB1 LINE L1 5797 6121 -30 21 36 0 0 chr5 29537415 29537443 -170092707 + AT_rich Low_complexity Low_complexity 1 28 0 265 302 101 41 chr5 29537484 29537653 -170092497 + HAL1 LINE L1 743 921 -1586 2757 48 6 14 chr5 29537702 29538058 -170092092 + L1PA5 LINE L1 5797 6149 -5 399 295 58 7 chr5 29538100 29538239 -170091911 - L1ME LINE L1 -2025 4357 4212 * 556 316 21 24 chr5 29538232 29538561 -170091589 - L1ME LINE L1 -3801 2581 2321 21 36 0 0 chr5 29538752 29538780 -170091370 + AT_rich Low_complexity Low_complexity 1 28 0 267 292 67 48 chr5 29538814 29539438 -170090712 - L1ME LINE L1 -4559 2004 1266 198 0 0 0 chr5 29539449 29539471 -170090679 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 4200 146 6 22 chr5 29539471 29540145 -170090005 - L1PA16 LINE L1 -11 6155 5492 2252 107 0 0 chr5 29540145 29540443 -170089707 - AluY SINE Alu -12 299 2 4200 146 6 22 chr5 29540443 29540493 -170089657 - L1PA16 LINE L1 -674 5492 5443 2029 207 47 6 chr5 29540493 29540961 -170089189 + L1P LINE L1 4561 5047 -1099 879 240 64 43 chr5 29542150 29542469 -170087681 - L1MB7 LINE L1 0 6184 5868 2245 112 0 0 chr5 29542499 29542802 -170087348 - AluSx SINE Alu -9 303 1 281 335 23 40 chr5 29543970 29544143 -170086007 - MIR SINE MIR 0 262 93 1397 306 3 67 chr5 29544274 29544604 -170085546 + AluSx SINE Alu 1 309 -3 184 317 48 39 chr5 29544768 29544872 -170085278 - L2 LINE L2 -14 3299 3195 2255 107 0 0 chr5 29545955 29546264 -170083886 + AluSg SINE Alu 1 309 -1 32 57 0 0 chr5 29547290 29547343 -170082807 + AT_rich Low_complexity Low_complexity 1 53 0 913 136 19 7 chr5 29547834 29547988 -170082162 + L1PB2 LINE L1 5993 6148 -3 786 272 15 0 chr5 29548124 29548330 -170081820 + MER3 DNA MER1_type 1 209 0 1389 275 50 44 chr5 29549029 29549887 -170080263 + L1PB4 LINE L1 4 2105 -4925 8373 222 71 36 chr5 29549989 29551061 -170079089 + L1PB4 LINE L1 2350 3382 -3724 1981 155 0 0 chr5 29551061 29551357 -170078793 - AluSx SINE Alu -16 296 1 8373 222 71 36 chr5 29551357 29551812 -170078338 + L1PB4 LINE L1 3382 3819 -3287 2191 120 0 0 chr5 29551812 29552120 -170078030 + AluSg SINE Alu 1 308 -2 8373 222 71 36 chr5 29552120 29553866 -170076284 + L1PB4 LINE L1 3819 6158 -948 2530 205 23 4 chr5 29554516 29555072 -170075078 + L1PB4 LINE L1 6550 7116 0 235 270 16 0 chr5 29555194 29555257 -170074893 + MLT1F1 LTR MaLR 44 107 -460 4630 93 1 30 chr5 29555300 29555391 -170074759 + PABL_A LTR ERV1 1 93 -567 2262 92 3 0 chr5 29555391 29555694 -170074456 + AluSx SINE Alu 1 304 -8 4630 93 1 30 chr5 29555694 29556281 -170073869 + PABL_A LTR ERV1 93 660 0 2509 191 28 8 chr5 29556307 29556805 -170073345 + L1MC3 LINE L1 7260 7767 -18 598 188 15 53 chr5 29557023 29557156 -170072994 - FLAM_A SINE Alu -5 128 1 22 35 0 0 chr5 29558682 29558711 -170071439 + AT_rich Low_complexity Low_complexity 1 29 0 5198 118 14 1 chr5 29559030 29559807 -170070343 + L1PA13 LINE L1 5370 6156 -7 1422 220 28 43 chr5 29560877 29561273 -170068877 + MLT1B LTR MaLR 1 390 0 31 44 0 0 chr5 29561680 29561725 -170068425 + AT_rich Low_complexity Low_complexity 1 45 0 234 200 8 56 chr5 29561738 29561863 -170068287 + A-rich Low_complexity Low_complexity 1 119 0 248 254 18 0 chr5 29562093 29562148 -170068002 - L2 LINE L2 0 3313 3258 199 325 35 44 chr5 29562395 29562509 -170067641 + MIR SINE MIR 27 139 -123 3568 121 27 17 chr5 29562807 29563394 -170066756 + MER4E LTR ERV1 1 593 -173 388 67 4 32 chr5 29563518 29563581 -170066569 + MLT2A1 LTR ERVL 391 444 0 34 0 0 0 chr5 29563600 29563634 -170066516 + AT_rich Low_complexity Low_complexity 1 34 0 2990 91 8 0 chr5 29563687 29564084 -170066066 - MLT2A1 LTR ERVL -40 404 5 4805 140 61 3 chr5 29564138 29564978 -170065172 + L1P3 LINE L1 4 794 -5352 5949 52 18 4 chr5 29564978 29565746 -170064404 + L1PA5 LINE L1 5368 6151 -3 4805 140 61 3 chr5 29565746 29565760 -170064390 + L1P3 LINE L1 794 3783 -2363 237 33 0 0 chr5 29566073 29566103 -170064047 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 77 0 0 chr5 29566433 29566459 -170063691 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 23 33 0 0 chr5 29567877 29567907 -170062243 + AT_rich Low_complexity Low_complexity 1 30 0 243 365 0 0 chr5 29568016 29568120 -170062030 - L1 LINE L1 -1983 4163 4060 37 90 0 0 chr5 29568878 29568978 -170061172 + AT_rich Low_complexity Low_complexity 1 100 0 514 121 17 35 chr5 29619578 29619694 -170010456 + AluYb8 SINE Alu 205 318 0 969 267 4 24 chr5 29619699 29619950 -170010200 - MLT2B1 LTR ERVL -274 246 1 949 369 42 14 chr5 29620176 29620796 -170009354 - HERV16 LTR ERVL -2249 2747 2111 921 193 10 0 chr5 29620973 29621165 -170008985 - L1M4c LINE L1 -4874 1510 1317 4239 196 7 14 chr5 29621174 29621986 -170008164 + Tigger1 DNA MER2_type 1 807 -1611 634 247 46 42 chr5 29622089 29622328 -170007822 + L1ME2 LINE L1 5751 5990 -174 537 234 28 0 chr5 29622319 29622464 -170007686 + L1MA10 LINE L1 6185 6333 -1 * 202 247 0 24 chr5 29622891 29622976 -170007174 + GA-rich Low_complexity Low_complexity 2 84 0 3161 242 33 33 chr5 29623678 29624694 -170005456 + L1M3 LINE L1 4417 5434 -737 2044 173 53 9 chr5 29624694 29625144 -170005006 + L1PA15 LINE L1 5693 6162 -3 1176 92 0 0 chr5 29625337 29625501 -170004649 + Tigger1 DNA MER2_type 804 967 -1451 5392 210 19 11 chr5 29625506 29626643 -170003507 + Tigger1 DNA MER2_type 1265 2410 -8 4980 202 44 56 chr5 29626666 29627959 -170002191 - L1M4c LINE L1 -5093 1291 14 187 409 94 6 chr5 29628297 29628456 -170001694 - L2 LINE L2 -295 2977 2805 29 78 0 0 chr5 29628978 29629042 -170001108 + AT_rich Low_complexity Low_complexity 1 64 0 231 246 8 157 chr5 29629042 29629176 -170000974 - MER58B DNA MER1_type -4 337 224 342 318 132 42 chr5 29629587 29630388 -169999762 + L1MB3 LINE L1 3745 4617 -1529 324 320 11 11 chr5 29630939 29631114 -169999036 + L1MEc LINE L1 1581 1755 -4641 386 259 68 63 chr5 29631248 29631453 -169998697 + L1MEc LINE L1 3194 3399 -2816 398 373 71 25 chr5 29631454 29631808 -169998342 - L2 LINE L2 -1257 2057 1688 452 316 25 31 chr5 29633397 29633593 -169996557 + L1MC4 LINE L1 6765 6959 -1083 1491 119 9 9 chr5 29633875 29634093 -169996057 + AluSx SINE Alu 62 279 -33 289 119 0 0 chr5 29634093 29634135 -169996015 + AluSc SINE Alu 160 201 -98 504 136 144 42 chr5 29634135 29634253 -169995897 + AluSg/x SINE Alu 172 301 -11 21 36 0 0 chr5 29634402 29634430 -169995720 + AT_rich Low_complexity Low_complexity 1 28 0 1421 269 10 2 chr5 29634453 29634847 -169995303 + L1MEc LINE L1 3857 4253 -1962 210 158 0 0 chr5 29635033 29635071 -169995079 + A-rich Low_complexity Low_complexity 1 38 0 1857 280 39 17 chr5 29635092 29635739 -169994411 + L1MB3 LINE L1 5475 6135 -48 774 254 27 11 chr5 29636080 29636265 -169993885 - MER58A DNA MER1_type 0 224 37 630 338 43 23 chr5 29636416 29636815 -169993335 + MLT1I LTR MaLR 1 407 -2 4333 195 37 9 chr5 29637320 29637836 -169992314 - L1MA9 LINE L1 0 6312 5757 243 88 0 0 chr5 29637836 29637870 -169992280 + (TG)n Simple_repeat Simple_repeat 2 35 0 4333 195 37 9 chr5 29637870 29638269 -169991881 - L1MA9 LINE L1 -555 5757 5371 359 360 36 0 chr5 29638316 29638427 -169991723 - L1M2a LINE L1 -6739 429 315 913 156 0 11 chr5 29638558 29638737 -169991413 + CT-rich Low_complexity Low_complexity 4 180 0 195 157 0 0 chr5 29638740 29638791 -169991359 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 901 186 34 0 chr5 29638802 29638979 -169991171 - AluSg/x SINE Alu 0 312 130 26 30 0 0 chr5 29639535 29639568 -169990582 + AT_rich Low_complexity Low_complexity 1 33 0 1884 106 40 7 chr5 29640382 29640688 -169989462 + AluSx SINE Alu 1 315 0 26 30 0 0 chr5 29641052 29641085 -169989065 + AT_rich Low_complexity Low_complexity 1 33 0 312 240 0 13 chr5 29641429 29641504 -169988646 - MIR SINE MIR -16 246 173 1457 257 33 38 chr5 29641649 29642197 -169987953 - LTR55 LTR ERV -2 546 2 201 39 0 0 chr5 29642289 29642315 -169987835 + (GA)n Simple_repeat Simple_repeat 1 26 0 1346 213 78 27 chr5 29642512 29642883 -169987267 - MLT1B LTR MaLR 0 390 1 339 44 0 0 chr5 29642976 29643021 -169987129 + (TG)n Simple_repeat Simple_repeat 2 46 0 328 289 58 10 chr5 29643588 29643692 -169986458 - L2 LINE L2 -36 3277 3169 3338 182 72 49 chr5 29644486 29645344 -169984806 + L1MC3 LINE L1 6895 7772 -13 184 255 0 0 chr5 29646196 29646243 -169983907 - L2 LINE L2 0 3313 3267 294 392 59 5 chr5 29649230 29649452 -169980698 + MIR SINE MIR 24 257 -5 1033 271 97 30 chr5 29651774 29652236 -169977914 + MLT1D LTR MaLR 13 505 0 2118 126 3 0 chr5 29652469 29652771 -169977379 + AluSp SINE Alu 1 303 -10 2571 246 44 71 chr5 29652972 29653893 -169976257 + L1MCa LINE L1 3 880 -5165 631 202 0 0 chr5 29653893 29654002 -169976148 + AluJb SINE Alu 22 130 -182 180 0 0 0 chr5 29654009 29654029 -169976121 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2387 209 76 52 chr5 29654034 29654251 -169975899 + L1MCa LINE L1 966 1176 -5388 1484 254 14 6 chr5 29654251 29654613 -169975537 + MLT1A1 LTR MaLR 1 365 0 2387 209 76 52 chr5 29654613 29655389 -169974761 + L1MCa LINE L1 1176 2071 -4493 283 211 0 28 chr5 29655492 29655563 -169974587 - MSTD LTR MaLR -3 393 325 501 223 154 47 chr5 29655666 29655899 -169974251 + L1MCa LINE L1 1930 2187 -4558 1812 158 3 0 chr5 29656222 29656519 -169973631 - AluSx SINE Alu -14 298 1 933 228 12 69 chr5 29656525 29656718 -169973432 + L1ME2 LINE L1 5643 5811 -353 1984 145 3 0 chr5 29656718 29657029 -169973121 + AluSx SINE Alu 1 312 0 933 228 12 69 chr5 29657029 29657168 -169972982 + L1ME2 LINE L1 5811 5956 -208 313 299 72 24 chr5 29657180 29657347 -169972803 + L1MCa LINE L1 3656 3830 -2734 228 67 0 0 chr5 29657557 29657587 -169972563 + (CA)n Simple_repeat Simple_repeat 1 30 0 372 22 0 0 chr5 29659001 29659046 -169971104 + (TG)n Simple_repeat Simple_repeat 2 46 0 4120 175 21 2 chr5 29659448 29660255 -169969895 - L1PA13 LINE L1 -783 5363 4542 5735 98 9 1 chr5 29660261 29661088 -169969062 + L1PA13 LINE L1 5330 6162 -1 24 0 0 0 chr5 29661149 29661173 -169968977 + AT_rich Low_complexity Low_complexity 1 24 0 702 235 25 6 chr5 29661599 29661761 -169968389 + MIR SINE MIR 96 260 -2 2368 70 26 0 chr5 29661965 29662267 -169967883 + AluY SINE Alu 1 310 -1 2108 130 3 0 chr5 29662638 29662946 -169967204 + AluSg SINE Alu 1 309 -1 1941 141 44 36 chr5 29662973 29663334 -169966816 - THE1B LTR MaLR 0 364 1 338 299 97 62 chr5 29663494 29663576 -169966574 - MLT1G1 LTR MaLR -32 510 432 1982 84 29 42 chr5 29663576 29663885 -169966265 - AluSg1 SINE Alu -4 305 1 338 299 97 62 chr5 29663885 29664278 -169965872 - MLT1G1 LTR MaLR -110 432 1 4760 154 26 27 chr5 29664861 29665832 -169964318 + L1PA16 LINE L1 5185 6156 -10 258 239 18 46 chr5 29666637 29666746 -169963404 + (CATATA)n Simple_repeat Simple_repeat 5 110 0 253 222 0 71 chr5 29666746 29666845 -169963305 + L1MC4 LINE L1 6612 6703 -1339 260 172 17 0 chr5 29666845 29666903 -169963247 + (TA)n Simple_repeat Simple_repeat 1 59 0 24 53 0 0 chr5 29667111 29667149 -169963001 + AT_rich Low_complexity Low_complexity 1 38 0 351 0 0 0 chr5 29668264 29668303 -169961847 + (CA)n Simple_repeat Simple_repeat 1 39 0 556 200 10 0 chr5 29668304 29668404 -169961746 - MLT2B1 LTR ERVL -78 442 342 235 234 21 0 chr5 29668466 29668513 -169961637 - MLT2B1 LTR ERVL -170 350 303 415 226 219 20 chr5 29668532 29668678 -169961472 + AluY SINE Alu 137 311 0 340 98 233 0 chr5 29668756 29668889 -169961261 + AluYa8 SINE Alu 1 164 -136 24 0 0 0 chr5 29669704 29669728 -169960422 + AT_rich Low_complexity Low_complexity 1 24 0 318 101 0 130 chr5 29669728 29669797 -169960353 - HY4 scRNA scRNA 0 93 34 2652 48 0 0 chr5 29670669 29670980 -169959170 - AluY SINE Alu 0 311 1 2286 143 8 0 chr5 29672285 29672657 -169957493 + THE1C LTR MaLR 1 375 0 9399 129 38 13 chr5 29672658 29674199 -169955951 + THE1C-int LTR MaLR 2 1580 0 2511 115 14 0 chr5 29674199 29674564 -169955586 + THE1C LTR MaLR 5 375 0 456 314 91 32 chr5 29674593 29674845 -169955305 - L2 LINE L2 -349 2965 2699 3160 226 33 20 chr5 29676089 29676931 -169953219 - L1MB7 LINE L1 -34 6150 5298 2678 294 101 26 chr5 29676942 29678725 -169951425 - L1M4c LINE L1 -3884 2762 825 257 241 0 0 chr5 29679139 29679193 -169950957 - L1M4c LINE L1 -6299 347 294 453 200 0 11 chr5 29679214 29679309 -169950841 - L1M4 LINE L1 -740 5936 5843 421 139 63 0 chr5 29679310 29679389 -169950761 + LTR54 LTR ERV1 387 470 -40 224 57 0 29 chr5 29679461 29679496 -169950654 + (TA)n Simple_repeat Simple_repeat 2 35 0 205 222 0 19 chr5 29679568 29679622 -169950528 + (TATAA)n Simple_repeat Simple_repeat 2 54 0 24 53 0 0 chr5 29679660 29679698 -169950452 + AT_rich Low_complexity Low_complexity 1 38 0 1122 94 0 35 chr5 29679798 29679968 -169950182 - L1PA8A LINE L1 -54 6077 5914 5141 259 77 68 chr5 29679991 29680464 -169949686 - L1M4 LINE L1 -874 5770 5303 2409 134 3 18 chr5 29680464 29680845 -169949305 - THE1C LTR MaLR 0 375 1 5141 259 77 68 chr5 29680845 29681804 -169948346 - L1M4 LINE L1 -1341 5303 4354 2156 122 0 10 chr5 29681804 29682107 -169948043 + AluSg SINE Alu 1 300 -10 5141 259 77 68 chr5 29682107 29684491 -169945659 - L1M4 LINE L1 -2290 4354 1953 522 167 50 67 chr5 29684755 29684875 -169945275 + MER76 LTR ERV 569 686 -2 447 225 22 77 chr5 29684877 29684960 -169945190 - L1M4 LINE L1 -4970 1572 1486 2046 119 7 3 chr5 29684960 29685263 -169944887 - AluSg SINE Alu -6 304 1 447 225 22 77 chr5 29685263 29685414 -169944736 - L1M4 LINE L1 -5056 1486 1337 218 216 52 15 chr5 29685414 29685548 -169944602 + (TTATA)n Simple_repeat Simple_repeat 1 139 0 773 237 71 120 chr5 29685617 29686026 -169944124 + MSTD LTR MaLR 1 389 -7 352 219 10 0 chr5 29686028 29686124 -169944026 - L1M4 LINE L1 -5268 1274 1178 1282 214 98 11 chr5 29686133 29686489 -169943661 - L1M4 LINE L1 -5405 1137 751 1666 251 17 37 chr5 29686492 29687010 -169943140 - L1M4 LINE L1 -5897 645 138 2072 122 0 0 chr5 29687011 29687329 -169942821 + AluSq SINE Alu 2 319 0 580 254 0 0 chr5 29687329 29687467 -169942683 - L1M4 LINE L1 -6391 151 14 2027 153 117 5 chr5 29688364 29688749 -169941401 + MSTA LTR MaLR 1 428 0 1048 230 9 0 chr5 29688749 29688962 -169941188 - MLT1A1 LTR MaLR -7 358 144 2897 34 3 0 chr5 29688965 29689318 -169940832 - L1PA4 LINE L1 0 6155 5802 1536 226 3 13 chr5 29689322 29689640 -169940510 - MLT1A1 LTR MaLR -50 315 1 1928 245 48 35 chr5 29689640 29690442 -169939708 - MLT1A1-int LTR MaLR 0 1735 748 676 265 70 30 chr5 29690442 29690672 -169939478 + MLT1A1 LTR MaLR 125 363 -2 1352 225 11 4 chr5 29690676 29690956 -169939194 + MLT1A1-int LTR MaLR 2 283 -1452 406 182 0 0 chr5 29690958 29691024 -169939126 - MLT1A1 LTR MaLR -299 66 1 198 128 0 0 chr5 29691037 29691076 -169939074 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 1029 235 110 134 chr5 29691143 29691607 -169938543 + LTR40a LTR ERVL 8 460 -2 411 263 87 76 chr5 29691615 29691893 -169938257 - LTR37B LTR ERV1 -84 384 99 1539 238 79 2 chr5 29691893 29692325 -169937825 - MLT1C LTR MaLR 0 467 3 411 263 87 76 chr5 29692325 29692426 -169937724 - LTR37B LTR ERV1 -369 99 1 1385 178 36 88 chr5 29692828 29693239 -169936911 + MLT1B LTR MaLR 1 390 0 239 266 91 45 chr5 29693334 29693488 -169936662 + L2 LINE L2 736 896 -2418 336 297 67 55 chr5 29693537 29693943 -169936207 - L1MEd LINE L1 -844 1646 895 1604 205 106 14 chr5 29693975 29694400 -169935750 + MLT1C LTR MaLR 1 464 -3 241 250 16 16 chr5 29694556 29694620 -169935530 - L1MEd LINE L1 -5491 628 565 21 71 0 0 chr5 29695410 29695452 -169934698 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 29695896 29695917 -169934233 + AT_rich Low_complexity Low_complexity 1 21 0 198 217 0 0 chr5 29696472 29696518 -169933632 + L3 LINE CR1 658 703 -874 3154 206 50 15 chr5 29696823 29697721 -169932429 - L1PA16 LINE L1 -9 6157 5198 1007 246 38 55 chr5 29697724 29698123 -169932027 + LTR52 LTR ERVL 8 399 -22 1089 256 58 75 chr5 29698143 29698878 -169931272 - L1M4 LINE L1 -947 5199 4477 1596 280 129 24 chr5 29698921 29699826 -169930324 - L1M4 LINE L1 -1806 4340 3341 345 188 25 12 chr5 29699892 29699972 -169930178 - MLT1B LTR MaLR -119 271 191 1081 203 14 5 chr5 29699973 29700261 -169929889 + MLT1B LTR MaLR 3 331 -59 1819 188 0 3 chr5 29700261 29700570 -169929580 + AluJb SINE Alu 1 308 -4 288 119 45 45 chr5 29700883 29700950 -169929200 + MLT1B LTR MaLR 324 390 0 1002 205 48 4 chr5 29700950 29701218 -169928932 - L1MC3 LINE L1 -678 7525 7246 1035 194 15 20 chr5 29701726 29701927 -169928223 - L1MC3 LINE L1 -955 7248 7049 905 280 89 35 chr5 29701928 29702331 -169927819 + MER76 LTR ERV 1 425 -263 962 226 42 38 chr5 29702432 29702697 -169927453 + MER76 LTR ERV 415 680 -8 2541 223 87 3 chr5 29702705 29703373 -169926777 - L1MC3 LINE L1 -1151 7052 6329 998 203 52 12 chr5 29703371 29703751 -169926399 - L1MC3 LINE L1 -743 5821 5558 * 230 247 32 43 chr5 29703751 29703844 -169926306 - L1MC3 LINE L1 -1428 5136 5045 * 889 267 95 39 chr5 29703831 29704420 -169925730 - L1MC3 LINE L1 -2662 3902 3281 21 71 0 0 chr5 29704420 29704462 -169925688 + AT_rich Low_complexity Low_complexity 1 42 0 486 254 93 8 chr5 29704472 29704740 -169925410 - L1MC3 LINE L1 -4372 2373 1979 1876 99 7 24 chr5 29704745 29705037 -169925113 + MER51C LTR ERV1 354 640 0 288 215 140 32 chr5 29705058 29705151 -169924999 - L1MC3 LINE L1 -5529 516 414 270 300 34 101 chr5 29705185 29705360 -169924790 - L1MC3 LINE L1 -5759 286 134 2816 167 0 4 chr5 29705360 29705852 -169924298 - L1PA15 LINE L1 -3 6162 5673 270 300 34 101 chr5 29705852 29705943 -169924207 - L1MC3 LINE L1 -5911 134 38 422 281 0 0 chr5 29706931 29707062 -169923088 + L1MA10 LINE L1 6043 6332 -2 732 269 153 28 chr5 29707308 29707668 -169922482 - MLT1C LTR MaLR -4 463 59 1228 276 21 42 chr5 29707721 29708218 -169921932 - MLT1C-int LTR MaLR 0 1735 962 5762 79 2 7 chr5 29708232 29709580 -169920570 + L1PA4 LINE L1 4681 6020 -135 2858 52 11 0 chr5 29709685 29710050 -169920100 + L1PA4 LINE L1 5784 6152 -3 3422 225 31 25 chr5 29710185 29711059 -169919091 - MLT1C-int LTR MaLR -489 882 4 239 36 36 55 chr5 29711125 29711180 -169918970 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 1229 195 132 0 chr5 29711306 29711578 -169918572 - MLT2C1 LTR ERVL -89 308 1 2088 126 0 7 chr5 29712630 29712924 -169917226 + AluSc SINE Alu 3 294 -15 867 206 6 0 chr5 29713180 29713340 -169916810 - MSTD LTR MaLR -235 161 1 372 175 0 0 chr5 29713627 29713684 -169916466 + AluJ/FLAM SINE Alu 1 57 -245 480 279 182 34 chr5 29713735 29714086 -169916064 + HAL1 LINE L1 1732 2134 -373 1927 138 0 28 chr5 29714277 29714596 -169915554 - AluSq SINE Alu -3 310 1 210 339 48 40 chr5 29715531 29715655 -169914495 - MIR SINE MIR -104 158 34 342 45 0 0 chr5 29717613 29717657 -169912493 + (CA)n Simple_repeat Simple_repeat 2 45 0 296 111 37 0 chr5 29717702 29717756 -169912394 + L1MD3 LINE L1 7930 7985 -10 284 0 28 0 chr5 29717839 29717875 -169912275 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 2025 107 0 38 chr5 29717875 29718193 -169911957 + AluSg SINE Alu 3 308 -2 241 337 116 39 chr5 29718422 29718680 -169911470 + L2 LINE L2 2186 2463 -851 21 0 0 0 chr5 29718755 29718776 -169911374 + AT_rich Low_complexity Low_complexity 1 21 0 2392 48 0 7 chr5 29719272 29719567 -169910583 - AluY SINE Alu -18 293 1 21 89 0 0 chr5 29719886 29719942 -169910208 + AT_rich Low_complexity Low_complexity 1 56 0 40 49 0 0 chr5 29719997 29720058 -169910092 + AT_rich Low_complexity Low_complexity 1 61 0 3551 174 39 4 chr5 29720464 29721160 -169908990 - L1PA16 LINE L1 -9 6157 5438 8781 222 20 8 chr5 29721165 29723471 -169906679 + L1PA16 LINE L1 3112 5439 -727 870 258 47 16 chr5 29723998 29724312 -169905838 - MER74C LTR ERVL -139 419 13 415 27 68 0 chr5 29724729 29724802 -169905348 + (TCTA)n Simple_repeat Simple_repeat 3 80 0 1375 234 18 37 chr5 29724932 29725313 -169904837 - MLT1A2 LTR MaLR 0 374 1 52 41 0 0 chr5 29725927 29726000 -169904150 + AT_rich Low_complexity Low_complexity 1 73 0 2164 195 40 18 chr5 29728440 29728938 -169901212 + LTR22 LTR ERVK 1 509 0 307 194 65 0 chr5 29728945 29729053 -169901097 + (TCTA)n Simple_repeat Simple_repeat 2 116 0 227 161 0 16 chr5 29729054 29729116 -169901034 + (TA)n Simple_repeat Simple_repeat 1 61 0 24 67 0 0 chr5 29729556 29729601 -169900549 + AT_rich Low_complexity Low_complexity 1 45 0 261 0 0 0 chr5 29729627 29729656 -169900494 + (TG)n Simple_repeat Simple_repeat 2 30 0 534 292 146 42 chr5 29729758 29730395 -169899755 - L1M4 LINE L1 -1300 4846 4144 27 49 0 0 chr5 29730466 29730507 -169899643 + AT_rich Low_complexity Low_complexity 1 41 0 241 196 36 0 chr5 29730532 29730588 -169899562 + CT-rich Low_complexity Low_complexity 2 59 0 29 28 0 0 chr5 29730638 29730674 -169899476 + AT_rich Low_complexity Low_complexity 1 36 0 697 175 8 8 chr5 29730755 29730875 -169899275 - AluSg/x SINE Alu -64 248 129 1828 149 38 0 chr5 29730974 29731263 -169898887 + AluSq SINE Alu 1 300 -13 36 23 0 0 chr5 29731317 29731360 -169898790 + AT_rich Low_complexity Low_complexity 1 43 0 7275 95 14 20 chr5 29731890 29733008 -169897142 - L1PA7 LINE L1 -807 5339 4228 5840 86 9 4 chr5 29733008 29733817 -169896333 + L1PA7 LINE L1 5333 6150 -4 1996 194 60 21 chr5 29734248 29734713 -169895437 - L1MB3 LINE L1 -3 6180 5698 262 200 0 67 chr5 29734746 29734821 -169895329 - L1MB3 LINE L1 -150 6033 5964 1666 196 18 67 chr5 29734831 29735276 -169894874 - L1MB3 LINE L1 -473 5695 5273 450 178 0 0 chr5 29735318 29735408 -169894742 + (CA)n Simple_repeat Simple_repeat 1 90 0 22 35 0 0 chr5 29735535 29735564 -169894586 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr5 29735744 29735771 -169894379 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr5 29735814 29735844 -169894306 + AT_rich Low_complexity Low_complexity 1 30 0 21 71 0 0 chr5 29736114 29736156 -169893994 + AT_rich Low_complexity Low_complexity 1 42 0 235 323 21 85 chr5 29736704 29736893 -169893257 + MIR SINE MIR 15 191 -71 27 0 0 0 chr5 29737877 29737904 -169892246 + AT_rich Low_complexity Low_complexity 1 27 0 27 0 0 0 chr5 29737972 29737999 -169892151 + AT_rich Low_complexity Low_complexity 1 27 0 692 236 6 36 chr5 29738018 29738183 -169891967 - FRAM SINE Alu -6 160 1 825 199 70 0 chr5 29738210 29738396 -169891754 + L1MA5A LINE L1 5998 6196 -101 24 32 0 0 chr5 29738405 29738436 -169891714 + AT_rich Low_complexity Low_complexity 1 31 0 24 77 0 0 chr5 29738596 29738648 -169891502 + AT_rich Low_complexity Low_complexity 1 52 0 1377 48 0 0 chr5 29738911 29739079 -169891071 - L1PA3 LINE L1 0 6155 5988 2887 38 0 0 chr5 29739079 29739426 -169890724 + L1PA3 LINE L1 5623 5969 -186 637 271 29 45 chr5 29740186 29740430 -169889720 - Charlie1 DNA MER1_type -758 2003 1764 321 303 16 9 chr5 29740434 29740574 -169889576 + L1ME1 LINE L1 5334 5474 -704 455 280 62 15 chr5 29740772 29741019 -169889131 + L1ME1 LINE L1 5679 5927 -237 273 296 27 9 chr5 29741296 29741412 -169888738 - L1MEc LINE L1 -903 1673 1532 507 309 164 4 chr5 29741707 29741976 -169888174 - MLT2E LTR ERVL -129 499 188 234 113 48 16 chr5 29742582 29742652 -169887498 + (TA)n Simple_repeat Simple_repeat 1 72 0 25 0 0 0 chr5 29742790 29742815 -169887335 + AT_rich Low_complexity Low_complexity 1 25 0 183 204 0 0 chr5 29742843 29742887 -169887263 + (TA)n Simple_repeat Simple_repeat 2 45 0 682 265 60 17 chr5 29743571 29743805 -169886345 + LTR52 LTR ERVL 1 244 -177 2077 155 0 29 chr5 29743813 29744194 -169885956 - L1PA15 LINE L1 -2 6163 5794 351 0 0 0 chr5 29744194 29744233 -169885917 + (TG)n Simple_repeat Simple_repeat 2 40 0 28 0 0 0 chr5 29744261 29744289 -169885861 + AT_rich Low_complexity Low_complexity 1 28 0 313 238 93 75 chr5 29744289 29744503 -169885647 - L1MCa LINE L1 -4223 2203 1986 233 109 22 0 chr5 29744503 29744549 -169885601 + (TA)n Simple_repeat Simple_repeat 2 48 0 5259 188 20 9 chr5 29744556 29746097 -169884053 - L1PA15 LINE L1 -426 5739 4179 1377 164 102 31 chr5 29746106 29746430 -169883720 + THE1C LTR MaLR 3 349 -26 24 0 0 0 chr5 29746993 29747017 -169883133 + AT_rich Low_complexity Low_complexity 1 24 0 207 347 54 54 chr5 29747986 29748133 -169882017 - MIR3 SINE MIR -55 153 7 180 421 7 21 chr5 29748884 29749024 -169881126 - L3 LINE CR1 -855 722 585 23 0 0 0 chr5 29749354 29749377 -169880773 + AT_rich Low_complexity Low_complexity 1 23 0 1199 264 52 92 chr5 29749875 29750493 -169879657 - MLT1E LTR MaLR 0 593 1 198 0 0 0 chr5 29750711 29750733 -169879417 + (TC)n Simple_repeat Simple_repeat 1 22 0 782 220 117 7 chr5 29750768 29751059 -169879091 - MER33 DNA MER1_type -1 323 1 945 324 27 38 chr5 29751098 29751545 -169878605 + L1MA6 LINE L1 1542 1983 -5503 4451 233 74 49 chr5 29751882 29754861 -169875289 + L1MA6 LINE L1 1929 5002 -2563 * 4504 186 47 33 chr5 29754851 29756818 -169873332 + L1MA6 LINE L1 5718 7717 -2 21 0 0 0 chr5 29756826 29756847 -169873303 + AT_rich Low_complexity Low_complexity 1 21 0 1500 184 88 25 chr5 29757016 29757369 -169872781 - THE1C LTR MaLR 0 375 1 6997 158 32 8 chr5 29757710 29758979 -169871171 - HSMAR2 DNA Mariner -1 1301 2 29 0 0 0 chr5 29759142 29759171 -169870979 + AT_rich Low_complexity Low_complexity 1 29 0 263 222 69 0 chr5 29759200 29759272 -169870878 + L1M2 LINE L1 5106 5182 -964 1873 127 66 61 chr5 29759272 29759634 -169870516 + THE1B LTR MaLR 1 364 0 8218 122 17 2 chr5 29759661 29760910 -169869240 + THE1B-int LTR MaLR 15 1281 -299 866 163 11 37 chr5 29761016 29761206 -169868944 + L1M2 LINE L1 5258 5442 -858 22 0 0 0 chr5 29761258 29761280 -169868870 + AT_rich Low_complexity Low_complexity 1 22 0 253 256 23 12 chr5 29761374 29761460 -169868690 + (TATATG)n Simple_repeat Simple_repeat 1 87 0 335 269 128 32 chr5 29761476 29761632 -169868518 - MIR SINE MIR -61 201 31 2082 153 15 26 chr5 29761725 29762536 -169867614 - L1PA16 LINE L1 -3 6163 5295 2618 211 10 50 chr5 29762539 29763099 -169867051 - L1PA16 LINE L1 -1070 5076 4550 2413 69 0 7 chr5 29763099 29763403 -169866747 - AluY SINE Alu -9 302 1 2618 211 10 50 chr5 29763403 29763569 -169866581 - L1PA16 LINE L1 -1596 4550 4379 710 157 0 0 chr5 29763583 29763704 -169866446 - L1PB1 LINE L1 -1 6150 6030 1252 155 4 17 chr5 29763707 29763939 -169866211 + L1 LINE L1 3974 4202 -1944 * 2240 225 41 2 chr5 29763925 29764484 -169865666 - L1 LINE L1 -1764 4382 3802 258 32 0 0 chr5 29764534 29764565 -169865585 + (T)n Simple_repeat Simple_repeat 1 31 0 619 288 36 39 chr5 29765035 29765344 -169864806 + MER97b DNA MER1_type? 265 572 -481 304 237 44 104 chr5 29765416 29765686 -169864464 + MER97c DNA MER1_type? 830 1083 -7 2038 122 16 3 chr5 29765876 29765993 -169864157 + AluSg SINE Alu 1 115 -195 224 75 0 25 chr5 29765993 29766033 -169864117 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 2038 122 16 3 chr5 29766033 29766218 -169863932 + AluSg SINE Alu 115 307 -3 1961 203 5 9 chr5 29766326 29766760 -169863390 + L1MA5 LINE L1 5864 6295 -5 2327 57 3 13 chr5 29767305 29767604 -169862546 - AluY SINE Alu -12 299 4 509 158 0 11 chr5 29767852 29767947 -169862203 + AluY SINE Alu 1 94 -224 876 181 69 81 chr5 29767961 29768221 -169861929 - MER44D DNA MER2_type -81 528 2 261 119 0 0 chr5 29768243 29768285 -169861865 + (TA)n Simple_repeat Simple_repeat 2 43 0 476 127 25 13 chr5 29769035 29769114 -169861036 - L1MA5 LINE L1 -439 5861 5782 659 313 72 50 chr5 29769114 29769640 -169860510 + ERVL LTR ERVL 2211 2746 -2739 717 269 5 5 chr5 29769866 29770059 -169860091 + MLT2B1 LTR ERVL 1 193 -327 2123 221 44 27 chr5 29770063 29770587 -169859563 - L1 LINE L1 -3237 2909 2377 3162 177 17 22 chr5 29770626 29771436 -169858714 + L1MA8 LINE L1 5152 5956 -335 777 216 40 0 chr5 29771440 29771639 -169858511 + L1MA8 LINE L1 6082 6288 -3 22 70 0 0 chr5 29772697 29772740 -169857410 + AT_rich Low_complexity Low_complexity 1 43 0 979 221 76 92 chr5 29773083 29773427 -169856723 + MLT1A2 LTR MaLR 1 349 -25 361 0 20 20 chr5 29773427 29773477 -169856673 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1389 30 0 0 chr5 29773477 29773642 -169856508 - L1PA3 LINE L1 -16 6139 5975 979 221 76 92 chr5 29773642 29773676 -169856474 + MLT1A2 LTR MaLR 347 374 0 21 36 0 0 chr5 29774476 29774504 -169855646 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 29774530 29774558 -169855592 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr5 29774691 29774727 -169855423 + AT_rich Low_complexity Low_complexity 1 36 0 30 27 0 0 chr5 29776224 29776261 -169853889 + AT_rich Low_complexity Low_complexity 1 37 0 306 0 0 0 chr5 29776330 29776364 -169853786 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 11365 35 0 1 chr5 29776367 29778499 -169851651 - L1PA4 LINE L1 -8 6147 4017 255 56 28 0 chr5 29778500 29778536 -169851614 + L1PA4 LINE L1 3972 4008 -2138 289 75 38 0 chr5 29778751 29778804 -169851346 + (TG)n Simple_repeat Simple_repeat 2 56 0 204 189 40 27 chr5 29779024 29779098 -169851052 + (TA)n Simple_repeat Simple_repeat 2 76 0 213 154 0 0 chr5 29779101 29779140 -169851010 + (TATAA)n Simple_repeat Simple_repeat 4 42 0 2625 271 48 40 chr5 29779235 29780226 -169849924 + L1MC2 LINE L1 16 1014 -5528 5281 246 52 23 chr5 29780229 29783308 -169846842 + L1MC2 LINE L1 3659 6819 -23 2462 280 90 24 chr5 29783300 29784700 -169845450 + L1M4 LINE L1 3330 4822 -1324 * 362 219 83 10 chr5 29784701 29784797 -169845353 + MLT2B2 LTR ERVL 2 104 -411 254 262 35 43 chr5 29785130 29785271 -169844879 + THE1C LTR MaLR 236 375 0 10353 249 30 19 chr5 29785285 29789837 -169840313 - L1PA13 LINE L1 -1980 4817 2 357 200 51 126 chr5 29789872 29790047 -169840103 + LTR52 LTR ERVL 256 417 -4 27 62 0 0 chr5 29790239 29790287 -169839863 + AT_rich Low_complexity Low_complexity 1 48 0 26 64 0 0 chr5 29791207 29791254 -169838896 + AT_rich Low_complexity Low_complexity 1 47 0 293 194 174 0 chr5 29791385 29791483 -169838667 - L1MC4 LINE L1 -14 8028 7914 237 129 43 29 chr5 29791490 29791560 -169838590 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 7958 189 24 5 chr5 29791819 29794248 -169835902 - L1PA13 LINE L1 -10 6153 3686 1341 197 7 7 chr5 29794248 29794532 -169835618 - L1 LINE L1 -1326 4820 4537 286 301 68 28 chr5 29794579 29794755 -169835395 - L1M4 LINE L1 -1419 4727 4545 361 275 70 12 chr5 29794760 29794931 -169835219 - L1M4 LINE L1 -1553 4593 4413 201 222 0 22 chr5 29795144 29795189 -169834961 + (TA)n Simple_repeat Simple_repeat 1 44 0 665 298 114 41 chr5 29795203 29795314 -169834836 - L1M4 LINE L1 -1817 4329 4228 1565 205 3 0 chr5 29795314 29795602 -169834548 + AluJb SINE Alu 3 291 -21 665 298 114 41 chr5 29795602 29796147 -169834003 - L1M4 LINE L1 -1918 4228 3625 650 250 159 49 chr5 29796179 29796898 -169833252 - L1M4 LINE L1 -2692 3454 2657 312 191 16 0 chr5 29797657 29797720 -169832430 - MLT1G1 LTR MaLR -16 579 516 402 352 42 26 chr5 29798292 29798602 -169831548 - L1MEc LINE L1 -6009 387 73 328 250 0 0 chr5 29798645 29798721 -169831429 + L2 LINE L2 2404 2479 -835 410 297 99 24 chr5 29798947 29799240 -169830910 + L2 LINE L2 2938 3252 -61 1821 212 52 63 chr5 29799324 29799941 -169830209 - LTR65 LTR ERV1 -57 612 3 1627 138 51 0 chr5 29800052 29800305 -169829845 + AluSg SINE Alu 44 309 -1 22 56 0 0 chr5 29800305 29800341 -169829809 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr5 29800371 29800404 -169829746 + AT_rich Low_complexity Low_complexity 1 33 0 2172 101 7 0 chr5 29801155 29801453 -169828697 + AluSx SINE Alu 5 304 -8 1430 212 59 52 chr5 29802249 29802674 -169827476 + MSTC LTR MaLR 1 428 0 2317 202 96 2 chr5 29803004 29803505 -169826645 - MER44D DNA MER2_type -1 604 2 345 245 59 10 chr5 29804982 29805084 -169825066 - MLT1E LTR MaLR -8 585 479 317 169 0 145 chr5 29805088 29805212 -169824938 + L1M4 LINE L1 2780 2885 -3261 2216 278 78 2 chr5 29805240 29806195 -169823955 + L1M4 LINE L1 2110 3137 -3009 26 50 0 0 chr5 29806646 29806686 -169823464 + AT_rich Low_complexity Low_complexity 1 40 0 1029 236 63 53 chr5 29806802 29807131 -169823019 - L1ME3A LINE L1 -180 5990 5655 324 0 0 0 chr5 29807131 29807167 -169822983 + (TG)n Simple_repeat Simple_repeat 2 37 0 1029 236 63 53 chr5 29807167 29807235 -169822915 - L1ME3A LINE L1 -515 5655 5589 223 274 96 67 chr5 29807442 29807676 -169822474 + L2 LINE L2 2929 3216 -97 285 359 0 62 chr5 29807824 29807969 -169822181 + MIR SINE MIR 26 161 -101 2149 114 0 0 chr5 29808312 29808610 -169821540 - AluSg SINE Alu 0 310 13 3334 109 6 0 chr5 29808661 29809156 -169820994 - L1MA1 LINE L1 -1 6301 5804 978 223 47 37 chr5 29809281 29809581 -169820569 - L1MB8 LINE L1 -173 6005 5703 724 214 13 13 chr5 29809656 29809815 -169820335 - L1MB8 LINE L1 -1981 4165 4007 23 33 0 0 chr5 29810236 29810266 -169819884 + AT_rich Low_complexity Low_complexity 1 30 0 404 318 33 14 chr5 29810364 29810578 -169819572 - LTR16A1 LTR ERVL 0 457 240 22 0 0 0 chr5 29810880 29810902 -169819248 + AT_rich Low_complexity Low_complexity 1 22 0 351 218 0 79 chr5 29812514 29812615 -169817535 - MIR SINE MIR -3 259 167 1629 184 21 91 chr5 29812801 29813220 -169816930 - MLT1B LTR MaLR 0 390 1 1914 134 57 33 chr5 29813415 29813781 -169816369 + THE1C LTR MaLR 1 375 0 1524 233 46 35 chr5 29813822 29813966 -169816184 - MLT1C LTR MaLR 0 467 326 2024 117 7 3 chr5 29813966 29814264 -169815886 + AluSc SINE Alu 3 301 -8 1524 233 46 35 chr5 29814264 29814309 -169815841 - MLT1C LTR MaLR -141 326 283 311 0 0 25 chr5 29814309 29814349 -169815801 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1524 233 46 35 chr5 29814349 29814618 -169815532 - MLT1C LTR MaLR -184 283 3 865 267 22 13 chr5 29814731 29814956 -169815194 + MLT1A1 LTR MaLR 139 365 0 24 32 0 0 chr5 29815165 29815196 -169814954 + AT_rich Low_complexity Low_complexity 1 31 0 1933 128 3 20 chr5 29815412 29815716 -169814434 + AluSg SINE Alu 4 302 -8 1999 119 0 12 chr5 29866252 29866589 -169763561 + L1PA2 LINE L1 5821 6153 -2 1358 355 90 42 chr5 29867969 29868840 -169761310 - ERVL LTR ERVL -1384 4380 3422 2344 49 0 40 chr5 29868840 29869164 -169760986 + AluY SINE Alu 1 311 0 1358 355 90 42 chr5 29869164 29869612 -169760538 - ERVL LTR ERVL -2342 3422 2997 388 324 54 10 chr5 29869692 29869896 -169760254 - ERVL LTR ERVL -2640 2845 2633 401 343 53 46 chr5 29869955 29870389 -169759761 - ERVL LTR ERVL -3201 2563 2127 302 256 0 61 chr5 29870952 29871034 -169759116 + LTR16B LTR ERVL 96 172 -292 1720 201 24 26 chr5 29871046 29871617 -169758533 - L1M2 LINE L1 -743 5403 4941 1045 166 18 14 chr5 29871630 29871853 -169758297 + L1M1 LINE L1 5300 5523 -777 2082 252 106 98 chr5 29871871 29872367 -169757783 - L1MD3 LINE L1 -1 7994 7504 264 279 115 0 chr5 29872367 29872471 -169757679 - MLT1F1 LTR MaLR -447 120 5 2082 252 106 98 chr5 29872471 29873563 -169756587 - L1MD3 LINE L1 -491 7504 6211 910 200 0 54 chr5 29873593 29873798 -169756352 - AluJo SINE Alu -24 288 95 1997 240 99 46 chr5 29873816 29874045 -169756105 - L1MD3 LINE L1 -746 5400 5185 2380 215 49 9 chr5 29874045 29874537 -169755613 + MLT2B3 LTR ERVL 1 517 -37 990 55 20 0 chr5 29874537 29874683 -169755467 + (TCTA)n Simple_repeat Simple_repeat 4 152 0 2380 215 49 9 chr5 29874683 29874721 -169755429 + MLT2B3 LTR ERVL 517 552 -2 1997 240 99 46 chr5 29874721 29874889 -169755261 - L1MD3 LINE L1 -961 5185 5027 1633 199 0 26 chr5 29874889 29875195 -169754955 - AluJo SINE Alu -12 300 3 1997 240 99 46 chr5 29875195 29876107 -169754043 - L1MD3 LINE L1 -1119 5027 4356 1939 191 54 5 chr5 29876115 29876560 -169753590 - L1MA8 LINE L1 -8 6283 5817 2939 177 8 2 chr5 29876561 29877170 -169752980 + L1MA8 LINE L1 5182 5793 -498 192 77 0 0 chr5 29877174 29877200 -169752950 + (CA)n Simple_repeat Simple_repeat 1 26 0 290 121 99 0 chr5 29877214 29877305 -169752845 + (TTATA)n Simple_repeat Simple_repeat 1 100 0 1206 187 17 0 chr5 29877306 29877536 -169752614 - L1MC1 LINE L1 -12 6321 6088 319 384 8 8 chr5 29878103 29878348 -169751802 - MER70-int LTR ERVL -348 4675 4431 956 276 10 3 chr5 29880347 29880640 -169749510 - L1MD3 LINE L1 -3335 2811 2517 270 319 43 58 chr5 29881494 29881682 -169748468 + MLT1I LTR MaLR 104 288 -121 297 214 0 0 chr5 29881745 29881801 -169748349 - L1 LINE L1 -1045 5101 5046 1258 231 13 7 chr5 29881816 29882114 -169748036 - L1 LINE L1 -1154 4992 4693 3760 176 16 7 chr5 29882122 29882853 -169747297 - L1MA6 LINE L1 0 6300 5563 22 35 0 0 chr5 29882905 29882934 -169747216 + AT_rich Low_complexity Low_complexity 1 29 0 1589 203 64 11 chr5 29882947 29883587 -169746563 + L1MA10 LINE L1 3256 3917 -3648 748 44 0 0 chr5 29885165 29885256 -169744894 + MER85 DNA T2_type 44 134 -5 659 218 57 0 chr5 29885256 29885449 -169744701 + L1MA10 LINE L1 4628 4831 -2734 4303 204 21 42 chr5 29885486 29886692 -169743458 + L1MA10 LINE L1 6526 7716 -37 1861 158 0 32 chr5 29887428 29887739 -169742411 - AluSx SINE Alu -11 301 1 185 192 0 19 chr5 29887885 29887937 -169742213 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 43 35 0 0 chr5 29887943 29888000 -169742150 + AT_rich Low_complexity Low_complexity 1 57 0 335 335 30 12 chr5 29888082 29888246 -169741904 + MLT1I LTR MaLR 121 287 -122 224 348 43 12 chr5 29891898 29892059 -169738091 - MIR SINE MIR -46 216 51 276 91 0 0 chr5 29893057 29893101 -169737049 + (TG)n Simple_repeat Simple_repeat 2 45 0 255 419 105 19 chr5 29893502 29893827 -169736323 + L2 LINE L2 2916 3268 -4 415 315 40 47 chr5 29894492 29894641 -169735509 - MIR SINE MIR -113 149 2 180 125 0 0 chr5 29896154 29896186 -169733964 + (CA)n Simple_repeat Simple_repeat 1 32 0 195 307 89 10 chr5 29896662 29896763 -169733387 - MIR SINE MIR -122 140 32 386 282 98 17 chr5 29897612 29897786 -169732364 + MIR SINE MIR 73 260 -2 240 59 0 0 chr5 29898189 29898223 -169731927 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 23 55 0 18 chr5 29898851 29898887 -169731263 + AT_rich Low_complexity Low_complexity 1 37 -17 2138 102 3 23 chr5 29898887 29899191 -169730959 - AluSq SINE Alu -15 298 1 23 55 0 18 chr5 29899191 29899209 -169730941 + AT_rich Low_complexity Low_complexity 37 54 0 322 291 18 0 chr5 29899567 29899677 -169730473 - L1M4 LINE L1 -1537 4609 4498 1194 247 85 14 chr5 29899809 29900173 -169729977 + MLT1B LTR MaLR 1 390 0 352 195 13 0 chr5 29900251 29900328 -169729822 - L1PA16 LINE L1 0 6166 6089 966 269 71 68 chr5 29901027 29901276 -169728874 - L1ME3A LINE L1 -5 6165 5918 2107 205 35 55 chr5 29901276 29901841 -169728309 + MLT2B3 LTR ERVL 1 554 0 966 269 71 68 chr5 29901841 29902263 -169727887 - L1ME3A LINE L1 -252 5918 5492 533 26 105 0 chr5 29902273 29902349 -169727801 - L1PA4 LINE L1 -3 6152 6069 489 65 0 0 chr5 29902349 29902411 -169727739 + L1PA3 LINE L1 6009 6070 -85 23 0 0 0 chr5 29904368 29904391 -169725759 + AT_rich Low_complexity Low_complexity 1 23 0 226 272 78 42 chr5 29904420 29904611 -169725539 - L1M3 LINE L1 -666 5514 5317 541 323 54 27 chr5 29904894 29905188 -169724962 + MLT1G1 LTR MaLR 9 310 -285 282 51 0 0 chr5 29905190 29905229 -169724921 - MADE1 DNA Mariner 0 80 42 1855 144 0 0 chr5 29905810 29906081 -169724069 + AluSg SINE Alu 1 271 -39 356 266 89 47 chr5 29906121 29906335 -169723815 - L1M4 LINE L1 -1712 4434 4212 1245 215 61 25 chr5 29906381 29906660 -169723490 + AluJo SINE Alu 1 289 -13 35 24 0 0 chr5 29906869 29906911 -169723239 + AT_rich Low_complexity Low_complexity 1 42 0 206 222 0 0 chr5 29907465 29907501 -169722649 + (CACG)n Simple_repeat Simple_repeat 3 38 0 484 333 11 6 chr5 29907629 29907806 -169722344 - MER5B DNA MER1_type 0 178 1 22 0 0 0 chr5 29908608 29908630 -169721520 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr5 29908753 29908802 -169721348 + AT_rich Low_complexity Low_complexity 1 49 0 2004 249 30 14 chr5 29909528 29910026 -169720124 + LTR53 LTR ERVL 14 519 0 1040 192 0 0 chr5 29910176 29910379 -169719771 + L1PA15 LINE L1 4697 4899 -1247 2081 140 27 30 chr5 29910379 29910744 -169719406 - THE1B LTR MaLR 0 364 1 5897 126 0 2 chr5 29910744 29911578 -169718572 - THE1B-int LTR MaLR 0 1580 749 245 75 25 25 chr5 29911837 29911877 -169718273 - THE1B LTR MaLR -324 40 1 4773 184 19 34 chr5 29911877 29913176 -169716974 + L1PA15 LINE L1 4895 6162 -3 1044 182 35 13 chr5 29913944 29914175 -169715975 - L1M3 LINE L1 -365 5803 5568 652 232 57 0 chr5 29914172 29914349 -169715801 + L1MB1 LINE L1 5865 6051 -117 * 14713 228 38 12 chr5 29914369 29919530 -169710620 + L1PA13 LINE L1 2 5501 -1296 4104 136 3 10 chr5 29919537 29920153 -169709997 - LTR9 LTR ERV1 0 612 1 11644 156 10 37 chr5 29920156 29922240 -169707910 - HUERS-P3 LTR ERV1 -4 8915 6889 6520 149 29 9 chr5 29922234 29923290 -169706860 - HUERS-P3 LTR ERV1 -2264 6655 5579 * 306 345 69 32 chr5 29923638 29923884 -169706266 - L1MEd LINE L1 -5595 524 270 2175 105 0 3 chr5 29923950 29924244 -169705906 + AluSq SINE Alu 1 293 -20 31 0 0 0 chr5 29924244 29924275 -169705875 + AT_rich Low_complexity Low_complexity 1 31 0 414 0 0 0 chr5 29924398 29924444 -169705706 + (TG)n Simple_repeat Simple_repeat 2 47 0 1288 199 55 55 chr5 29924491 29924852 -169705298 - MLT1A1 LTR MaLR 0 365 5 1021 93 0 7 chr5 29924896 29925035 -169705115 + AluSp/q SINE Alu 166 303 -10 27 0 0 0 chr5 29925035 29925062 -169705088 + AT_rich Low_complexity Low_complexity 1 27 0 2787 206 48 13 chr5 29925612 29926298 -169703852 - MER67C LTR ERV1 0 710 1 2367 75 0 10 chr5 29926535 29926840 -169703310 - AluY SINE Alu -9 302 1 606 266 116 10 chr5 29927607 29927814 -169702336 + Charlie1b DNA MER1_type 7 235 -288 717 249 23 0 chr5 29927814 29928031 -169702119 + MER33 DNA MER1_type 1 222 -102 2377 147 25 23 chr5 29928236 29928677 -169701473 - LTR56 LTR ERV1 -3 442 1 5066 180 51 76 chr5 29928734 29930334 -169699816 - LTR49-int LTR ERV1 -1377 3746 2100 1788 149 59 0 chr5 29930334 29930623 -169699527 - AluSg SINE Alu -4 306 1 5066 180 51 76 chr5 29930623 29931009 -169699141 - LTR49-int LTR ERV1 -3023 2100 1706 355 299 9 9 chr5 29931128 29931235 -169698915 - LTR49-int LTR ERV1 -2884 3447 3341 3832 230 36 36 chr5 29931277 29932722 -169697428 - LTR49-int LTR ERV1 -2994 3337 1894 1497 185 34 24 chr5 29932722 29933019 -169697131 - AluJo SINE Alu -11 301 2 3832 230 36 36 chr5 29933019 29933049 -169697101 - LTR49-int LTR ERV1 -4437 1894 1866 2423 88 3 3 chr5 29933049 29933357 -169696793 - AluSx SINE Alu -4 308 1 3832 230 36 36 chr5 29933357 29933467 -169696683 - LTR49-int LTR ERV1 -4465 1866 1673 244 183 21 0 chr5 29933484 29933577 -169696573 + (TA)n Simple_repeat Simple_repeat 2 96 0 667 162 22 31 chr5 29933612 29933802 -169696348 - LTR49-int LTR ERV1 -4670 1661 1001 380 225 14 0 chr5 29933843 29933914 -169696236 - tRNA-Glu-GAG tRNA tRNA -2 73 2 304 274 12 12 chr5 29933955 29934039 -169696111 - LTR49-int LTR ERV1 -5132 1199 1116 345 184 79 0 chr5 29934157 29934233 -169695917 - LTR49-int LTR ERV1 -3670 1201 1120 297 250 25 25 chr5 29934277 29934357 -169695793 - MER57A LTR ERV1 -40 363 284 947 136 142 0 chr5 29934460 29934629 -169695521 + MSTA LTR MaLR 236 428 0 1243 260 81 50 chr5 29935404 29935908 -169694242 + MLT1E LTR MaLR 72 591 -2 32 43 0 0 chr5 29936218 29936264 -169693886 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr5 29936306 29936327 -169693823 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 29936649 29936686 -169693464 + AT_rich Low_complexity Low_complexity 1 37 0 1859 177 94 31 chr5 29937091 29937504 -169692646 - Tigger2 DNA MER2_type 0 2718 2280 291 261 0 0 chr5 29937502 29937567 -169692583 - Tigger2 DNA MER2_type -2649 69 5 * 33 25 0 0 chr5 29938226 29938266 -169691884 + AT_rich Low_complexity Low_complexity 1 40 0 212 271 176 41 chr5 29939006 29939176 -169690974 - L2 LINE L2 -836 2478 2286 30 0 0 0 chr5 29939477 29939507 -169690643 + AT_rich Low_complexity Low_complexity 1 30 0 223 303 8 42 chr5 29939617 29939736 -169690414 - L2 LINE L2 -541 2773 2659 1684 141 60 43 chr5 29939882 29940251 -169689899 - THE1C LTR MaLR 0 375 1 432 82 0 0 chr5 29940837 29940898 -169689252 + (CA)n Simple_repeat Simple_repeat 2 62 0 352 321 48 96 chr5 29941040 29941395 -169688755 - MLT1J1 LTR MaLR -44 402 65 185 276 92 11 chr5 29941488 29941575 -169688575 + MIR SINE MIR 124 217 -45 24 32 0 0 chr5 29942720 29942751 -169687399 + AT_rich Low_complexity Low_complexity 1 31 0 27 0 0 0 chr5 29943252 29943279 -169686871 + AT_rich Low_complexity Low_complexity 1 27 0 2152 109 0 10 chr5 29943534 29943838 -169686312 + AluSq SINE Alu 1 301 -12 711 235 207 22 chr5 29944139 29944462 -169685688 - L1ME1 LINE L1 -44 6122 5740 964 92 0 157 chr5 29945671 29945900 -169684250 + 7SK RNA RNA 1 193 0 25 90 0 0 chr5 29945908 29945975 -169684175 + AT_rich Low_complexity Low_complexity 1 67 0 1897 233 61 38 chr5 29945979 29946456 -169683694 - MER70B LTR ERVL -1 577 90 737 229 13 6 chr5 29946452 29946609 -169683541 - MER70A LTR ERVL -310 162 5 * 1532 268 29 29 chr5 29946613 29947125 -169683025 - L1MD2 LINE L1 -34 6325 5814 1022 254 150 31 chr5 29947948 29948302 -169681848 + MSTD LTR MaLR 1 396 0 237 278 40 48 chr5 29948302 29948411 -169681739 + MLT1F1 LTR MaLR 92 199 -343 1203 231 128 14 chr5 29948430 29948781 -169681369 + MLT1F1 LTR MaLR 177 567 0 615 332 22 25 chr5 29948932 29949287 -169680863 + MLT1F1-int LTR MaLR 248 601 -770 482 301 112 39 chr5 29949659 29949945 -169680205 + L2 LINE L2 2537 2843 -471 180 0 0 0 chr5 29950289 29950309 -169679841 + (TAA)n Simple_repeat Simple_repeat 2 21 0 679 270 44 14 chr5 29950441 29950757 -169679393 - MER93b LTR ERV1 -1 372 15 809 130 0 0 chr5 29950915 29951030 -169679120 - AluSq/x SINE Alu -198 115 1 677 117 0 0 chr5 29951038 29951141 -169679009 - AluSp/q SINE Alu -2 311 209 29 78 0 0 chr5 29951160 29951224 -169678926 + AT_rich Low_complexity Low_complexity 1 64 0 912 227 65 47 chr5 29952717 29953100 -169677050 - MLT1B LTR MaLR 0 390 1 1293 293 89 13 chr5 29954134 29954655 -169675495 + MLT1E LTR MaLR 15 591 -2 953 273 13 61 chr5 29954763 29955159 -169674991 + MLT2C1 LTR ERVL 18 394 -3 546 332 42 24 chr5 29955162 29955647 -169674503 + HERVL-C1 LTR ERVL 1 511 -5253 24 67 0 0 chr5 29955768 29955813 -169674337 + AT_rich Low_complexity Low_complexity 1 45 0 15072 184 41 5 chr5 29956065 29958868 -169671282 + L1M1 LINE L1 15 2921 -4644 315 0 0 0 chr5 29958868 29958903 -169671247 + (CAA)n Simple_repeat Simple_repeat 2 36 0 15072 184 41 5 chr5 29958903 29958929 -169671221 + L1M1 LINE L1 2921 2945 -4620 2395 189 104 21 chr5 29958929 29959583 -169670567 - LTR28 LTR ERV1 -3 633 1 3454 186 47 54 chr5 29959583 29960051 -169670099 + L1M1 LINE L1 2877 3347 -4218 1656 169 7 27 chr5 29960051 29960347 -169669803 + AluSx SINE Alu 1 290 -22 3454 186 47 54 chr5 29960347 29961320 -169668830 + L1M1 LINE L1 3347 4316 -3249 416 106 0 0 chr5 29961321 29961387 -169668763 + L1M LINE L1 5265 5330 -974 645 107 18 9 chr5 29961387 29961499 -169668651 + L1MA3 LINE L1 6188 6300 -5 569 299 44 13 chr5 29962150 29962437 -169667713 + L1ME1 LINE L1 4760 5063 -1083 2934 210 30 7 chr5 29962483 29963216 -169666934 + L1PA13 LINE L1 2264 3013 -3133 9727 203 6 3 chr5 29963217 29966159 -169663991 + L1PA13 LINE L1 3230 6152 -11 1366 278 79 27 chr5 29966295 29967124 -169663026 + L1ME1 LINE L1 5209 6078 -88 1498 332 66 16 chr5 29967430 29968217 -169661933 - HERVL LTR ERVL -1128 4526 3701 321 261 134 7 chr5 29968341 29968483 -169661667 + L1MA5 LINE L1 4294 4453 -1693 755 176 152 0 chr5 29968750 29968868 -169661282 + MER3 DNA MER1_type 12 163 -46 233 29 29 0 chr5 29968868 29968902 -169661248 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 755 176 152 0 chr5 29968902 29968948 -169661202 + MER3 DNA MER1_type 163 201 -8 331 306 67 78 chr5 29969202 29969373 -169660777 + MLT1H LTR MaLR 71 240 -309 2260 224 22 4 chr5 29969373 29969837 -169660313 - MER70A LTR ERVL 0 472 1 331 306 67 78 chr5 29969837 29969920 -169660230 + MLT1H LTR MaLR 240 322 -227 511 240 24 0 chr5 29970083 29970208 -169659942 + MLT1H LTR MaLR 420 547 -2 3973 213 42 0 chr5 29970246 29971078 -169659072 - L1 LINE L1 -1980 4166 3300 5051 156 26 64 chr5 29971081 29972306 -169657844 + L1MA5 LINE L1 5119 6299 -1 812 195 12 35 chr5 29972818 29972987 -169657163 + FAM SINE Alu 1 165 -10 252 0 0 0 chr5 29973420 29973448 -169656702 + (CA)n Simple_repeat Simple_repeat 1 28 0 392 284 37 43 chr5 29973452 29973711 -169656439 - MLT1I LTR MaLR -88 321 72 21 0 0 0 chr5 29974762 29974783 -169655367 + AT_rich Low_complexity Low_complexity 1 21 0 188 184 11 58 chr5 29975018 29975105 -169655045 + GA-rich Low_complexity Low_complexity 1 83 0 1105 196 19 169 chr5 29975945 29976271 -169653879 - MLT1C LTR MaLR -30 437 214 2160 118 0 3 chr5 29976271 29976585 -169653565 - AluSq SINE Alu 0 313 1 1105 196 19 169 chr5 29976585 29976772 -169653378 - MLT1C LTR MaLR -253 214 1 2099 132 3 7 chr5 29976946 29977256 -169652894 + AluSq SINE Alu 3 311 -2 23 78 0 0 chr5 29977296 29977347 -169652803 + AT_rich Low_complexity Low_complexity 1 51 0 305 241 46 0 chr5 29978015 29978102 -169652048 + L1MC4 LINE L1 6613 6703 -1339 1457 180 0 73 chr5 29978161 29978478 -169651672 - AluJo SINE Alu -16 296 3 284 355 69 10 chr5 29978479 29978682 -169651468 + L2 LINE L2 2539 2753 -561 250 406 23 33 chr5 29978784 29978998 -169651152 + L2 LINE L2 2852 3063 -209 790 292 13 45 chr5 29980090 29980398 -169649752 - HAL1 LINE L1 -2209 298 1 861 260 15 5 chr5 29980428 29980632 -169649518 - MER58A DNA MER1_type -3 221 16 239 176 0 15 chr5 29980749 29980817 -169649333 + CT-rich Low_complexity Low_complexity 2 68 0 189 94 0 0 chr5 29980817 29980849 -169649301 + (CA)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr5 29982002 29982027 -169648123 + (T)n Simple_repeat Simple_repeat 1 25 0 513 124 47 0 chr5 29982808 29982937 -169647213 + (TA)n Simple_repeat Simple_repeat 2 136 0 1750 156 0 14 chr5 29983066 29983361 -169646789 + AluSx SINE Alu 6 296 -16 1688 144 101 23 chr5 29983627 29983975 -169646175 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr5 29984265 29984287 -169645863 + AT_rich Low_complexity Low_complexity 1 22 0 547 266 14 50 chr5 29984385 29984607 -169645543 - MER20 DNA MER1_type -1 218 5 21 0 0 0 chr5 29984936 29984957 -169645193 + AT_rich Low_complexity Low_complexity 1 21 0 205 340 26 85 chr5 29987653 29987806 -169642344 - MER5B DNA MER1_type -23 155 12 1131 288 78 17 chr5 29988929 29989405 -169640745 - L1ME1 LINE L1 -15 6151 5647 300 348 77 25 chr5 29990176 29990538 -169639612 - L2 LINE L2 -974 2340 1960 257 222 278 11 chr5 29990584 29990674 -169639476 + MER34 LTR ERV1 9 122 -420 * 1362 261 68 14 chr5 29990651 29991076 -169639074 + MER39 LTR ERV1 260 707 0 646 233 39 28 chr5 29991402 29991582 -169638568 + MER5A DNA MER1_type 3 184 -5 24 32 0 0 chr5 29993772 29993803 -169636347 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr5 29994155 29994178 -169635972 + AT_rich Low_complexity Low_complexity 1 23 0 249 267 27 0 chr5 29994258 29994333 -169635817 + (TA)n Simple_repeat Simple_repeat 1 77 0 365 305 28 42 chr5 29994712 29994925 -169635225 + Charlie7 DNA MER1_type 312 521 -2091 * 425 271 0 0 chr5 29994922 29995040 -169635110 + Charlie7 DNA MER1_type 1722 1839 -773 263 298 153 15 chr5 29995068 29995199 -169634951 - LTR16A LTR ERVL 0 450 302 21 0 0 0 chr5 29995386 29995407 -169634743 + AT_rich Low_complexity Low_complexity 1 21 0 1915 155 0 16 chr5 29995447 29995764 -169634386 - AluSx SINE Alu 0 312 1 246 338 52 34 chr5 29996224 29996493 -169633657 + HAL1 LINE L1 45 318 -2189 875 315 52 65 chr5 29996536 29996576 -169633574 + L1MCb LINE L1 16 55 -5990 2104 78 0 0 chr5 29996576 29996845 -169633305 + AluY SINE Alu 43 311 0 875 315 52 65 chr5 29996845 29997356 -169632794 + L1MCb LINE L1 55 560 -5485 2321 265 95 40 chr5 29997443 29998138 -169632012 + L1MCb LINE L1 573 1228 -5336 2026 113 9 50 chr5 29998138 29998458 -169631692 + AluSx SINE Alu 1 307 -5 2321 265 95 40 chr5 29998458 30000333 -169629817 + L1MCb LINE L1 1228 3330 -3234 886 266 166 10 chr5 30000346 30000647 -169629503 - MSTD LTR MaLR -48 348 1 41 0 0 0 chr5 30001760 30001801 -169628349 + AT_rich Low_complexity Low_complexity 1 41 0 8406 65 3 2 chr5 30002042 30003112 -169627038 + MER11C LTR ERVK 1 1071 0 296 315 0 0 chr5 30003261 30003350 -169626800 - L1ME4a LINE L1 -70 6051 5963 827 196 17 17 chr5 30003897 30004070 -169626080 + AluSc SINE Alu 131 303 -6 961 223 109 8 chr5 30004470 30004902 -169625248 + MLT1D LTR MaLR 7 505 0 367 313 71 0 chr5 30005404 30005602 -169624548 - HAL1 LINE L1 -741 1766 1555 323 236 24 149 chr5 30005883 30006179 -169623971 - L1MEd LINE L1 -5050 1069 811 25 0 0 0 chr5 30006798 30006823 -169623327 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 30006955 30006977 -169623173 + AT_rich Low_complexity Low_complexity 1 22 0 2335 113 3 6 chr5 30008996 30009341 -169620809 - MER9 LTR ERVK 0 511 168 6378 27 0 0 chr5 30009341 30010086 -169620064 - L1P LINE L1 -1890 4256 3512 7699 20 2 0 chr5 30010091 30011191 -169618959 + L1PA2 LINE L1 5054 6155 0 1353 98 5 0 chr5 30011191 30011379 -169618771 - MER9 LTR ERVK -322 189 1 648 249 88 19 chr5 30011917 30012122 -169618028 - MIR SINE MIR -32 230 12 29 0 0 0 chr5 30013398 30013427 -169616723 + AT_rich Low_complexity Low_complexity 1 29 0 256 237 17 0 chr5 30013896 30013955 -169616195 + MIR SINE MIR 167 226 -36 1354 289 26 18 chr5 30014712 30015259 -169614891 + L1MA10 LINE L1 1563 2113 -4917 1209 128 20 15 chr5 30015262 30015466 -169614684 + THE1C LTR MaLR 171 375 0 890 252 40 29 chr5 30015466 30015794 -169614356 + L1MA10 LINE L1 4300 4633 -2473 * 3117 223 123 16 chr5 30015772 30015846 -169614304 + L1MA10 LINE L1 6180 6245 -1049 204 40 0 0 chr5 30015846 30015871 -169614279 + (TAA)n Simple_repeat Simple_repeat 2 26 0 3117 223 123 16 chr5 30015871 30016759 -169613391 + L1MA10 LINE L1 6245 7239 -55 22 88 0 0 chr5 30016765 30016822 -169613328 + AT_rich Low_complexity Low_complexity 1 57 0 13880 215 38 11 chr5 30017117 30019571 -169610579 + L1PB1 LINE L1 6 2391 -4476 199 70 23 23 chr5 30019571 30019614 -169610536 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 13880 215 38 11 chr5 30019614 30022236 -169607914 + L1PB1 LINE L1 2391 5487 -1380 246 32 0 0 chr5 30022236 30022267 -169607883 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 13880 215 38 11 chr5 30022267 30023208 -169606942 + L1PB1 LINE L1 5487 6401 -466 1733 139 89 13 chr5 30023252 30023568 -169606582 + L1PB1 LINE L1 6528 6867 0 254 381 13 13 chr5 30023826 30023981 -169606169 + MLT1J LTR MaLR 3 157 -354 286 216 45 82 chr5 30024104 30024238 -169605912 + MLT1J LTR MaLR 329 457 -54 1969 137 39 41 chr5 30024368 30024694 -169605456 - L1MA5A LINE L1 -3 6294 5968 2266 88 7 0 chr5 30024694 30024990 -169605160 - AluSp SINE Alu -13 300 3 1969 137 39 41 chr5 30024990 30025078 -169605072 - L1MA5A LINE L1 -329 5968 5881 24 32 0 0 chr5 30025672 30025703 -169604447 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr5 30026381 30026417 -169603733 + AT_rich Low_complexity Low_complexity 1 36 0 1530 198 21 43 chr5 30026752 30027125 -169603025 + MLT1A1 LTR MaLR 1 365 0 193 320 13 13 chr5 30027422 30027497 -169602653 + L2 LINE L2 3223 3297 -16 4603 221 64 21 chr5 30030054 30031391 -169598759 + L1MA9 LINE L1 3429 4822 -1324 1647 165 58 16 chr5 30031408 30031717 -169598433 + THE1C LTR MaLR 54 375 0 9230 130 40 38 chr5 30031717 30033291 -169596859 + THE1C-int LTR MaLR 1 1577 -3 1852 159 61 19 chr5 30033294 30033653 -169596497 + THE1C LTR MaLR 1 374 -1 3699 208 23 45 chr5 30033653 30035140 -169595010 + L1MA9 LINE L1 4816 6272 -40 22 0 0 0 chr5 30035140 30035162 -169594988 + AT_rich Low_complexity Low_complexity 1 22 0 2992 167 0 34 chr5 30035449 30035976 -169594174 - HSMAR2 DNA Mariner -395 907 399 1478 228 3 10 chr5 30035977 30036275 -169593875 + AluJb SINE Alu 17 312 0 719 104 9 0 chr5 30036283 30036398 -169593752 + (GGAA)n Simple_repeat Simple_repeat 1 116 0 1611 162 94 0 chr5 30036402 30036730 -169593420 - HSMAR2 DNA Mariner -910 392 34 3989 192 108 24 chr5 30038507 30039994 -169590156 + MER52A LTR ERV1 1 1755 0 2107 110 7 16 chr5 30040623 30040933 -169589217 + AluSq SINE Alu 1 307 -6 191 176 27 27 chr5 30041358 30041432 -169588718 + GA-rich Low_complexity Low_complexity 2 75 0 438 231 0 0 chr5 30041649 30041727 -169588423 + AluJ/FLAM SINE Alu 1 78 -234 458 259 181 0 chr5 30042828 30042994 -169587156 + MIR SINE MIR 67 262 0 799 263 86 97 chr5 30043840 30044433 -169585717 + MER49 LTR ERV1 10 733 -110 2030 132 48 28 chr5 30044433 30044788 -169585362 - THE1B LTR MaLR -2 362 1 799 263 86 97 chr5 30044788 30044897 -169585253 + MER49 LTR ERV1 733 842 -1 1118 214 84 72 chr5 30045336 30045835 -169584315 - MLT1D LTR MaLR 0 505 1 23 33 0 0 chr5 30046425 30046455 -169583695 + AT_rich Low_complexity Low_complexity 1 30 0 465 304 75 40 chr5 30046547 30046748 -169583402 - MIR SINE MIR -21 241 34 21 0 0 0 chr5 30046877 30046898 -169583252 + AT_rich Low_complexity Low_complexity 1 21 0 1071 294 65 18 chr5 30047196 30047533 -169582617 - MLT1E1 LTR MaLR -5 649 297 470 223 23 54 chr5 30047620 30047750 -169582400 - MLT1E1 LTR MaLR -528 126 1 1984 165 27 0 chr5 30048257 30048585 -169581565 + MER1B DNA MER1_type 1 337 0 298 248 113 43 chr5 30049926 30050067 -169580083 - MLT1H1 LTR MaLR 0 555 428 1006 257 143 55 chr5 30050242 30050861 -169579289 - L1M4 LINE L1 -1163 4983 4420 2149 109 3 0 chr5 30050861 30051154 -169578996 + AluSx SINE Alu 1 294 -18 1006 257 143 55 chr5 30051154 30051576 -169578574 - L1M4 LINE L1 -1726 4420 3850 267 277 34 14 chr5 30051883 30052031 -169578119 - L1M4 LINE L1 -3170 2976 2826 2623 144 33 7 chr5 30052071 30052522 -169577628 - L1MA3 LINE L1 -416 5889 5427 2328 118 3 26 chr5 30052521 30052901 -169577249 + L1MA3 LINE L1 5890 6260 -45 * 5998 92 10 12 chr5 30052901 30053274 -169576876 + L1PA8A LINE L1 4986 5358 -773 1862 80 108 31 chr5 30053274 30053562 -169576588 + AluY SINE Alu 1 310 -1 5998 92 10 12 chr5 30053562 30054330 -169575820 + L1PA8A LINE L1 5358 6128 -3 1212 194 84 35 chr5 30054353 30054637 -169575513 - AluJo SINE Alu -2 300 3 245 87 0 0 chr5 30054644 30054690 -169575460 + L1MA2 LINE L1 6259 6304 0 385 308 28 9 chr5 30054733 30054947 -169575203 - L1M4 LINE L1 -3332 2814 2597 3057 219 85 8 chr5 30054953 30055775 -169574375 - L1MC3 LINE L1 0 7785 6901 256 158 12 158 chr5 30055877 30055959 -169574191 - L1MC3 LINE L1 -954 6831 6762 946 241 25 59 chr5 30055967 30056287 -169573863 - L1MC3 LINE L1 -1174 6611 6303 * 1168 222 59 9 chr5 30056281 30056601 -169573549 - L1MC2 LINE L1 -350 5928 5593 1165 113 0 6 chr5 30056603 30056780 -169573370 - L1PA13 LINE L1 -3 6160 5985 3443 121 27 5 chr5 30056784 30057433 -169572717 - L1PA13 LINE L1 -356 5812 5151 2551 185 26 0 chr5 30057431 30057490 -169572660 + L1P LINE L1 4638 4694 -1452 * 347 0 0 23 chr5 30057490 30057534 -169572616 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2551 185 26 0 chr5 30057534 30057977 -169572173 + L1P LINE L1 4694 5153 -993 808 249 32 18 chr5 30057974 30058191 -169571959 - L1MC2 LINE L1 -2116 5603 5384 * 861 294 97 32 chr5 30058282 30059886 -169570264 - L1MC2 LINE L1 -3647 2433 720 9214 136 39 5 chr5 30060438 30061864 -169568286 - HUERS-P3 LTR ERV1 -3248 5671 4197 868 146 7 0 chr5 30061857 30061994 -169568156 + HUERS-P3 LTR ERV1 2372 2509 -6410 * 3290 142 20 2 chr5 30061994 30062551 -169567599 + L1PA13 LINE L1 5595 6161 -2 422 147 18 73 chr5 30062553 30062662 -169567488 + L1MB1 LINE L1 6044 6146 -22 363 96 0 0 chr5 30062673 30062725 -169567425 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 30 0 0 0 chr5 30063254 30063284 -169566866 + AT_rich Low_complexity Low_complexity 1 30 0 191 86 0 29 chr5 30063427 30063462 -169566688 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 1467 152 6 107 chr5 30063903 30064231 -169565919 - AluSx SINE Alu -7 295 1 1924 160 36 30 chr5 30064361 30064723 -169565427 + THE1B LTR MaLR 1 364 0 40 0 0 0 chr5 30064799 30064839 -169565311 + AT_rich Low_complexity Low_complexity 1 40 0 322 221 149 39 chr5 30065173 30065327 -169564823 - L1MEc LINE L1 -3594 2970 2800 227 340 69 14 chr5 30065363 30065651 -169564499 - L1MEc LINE L1 -4324 2421 2118 312 301 25 70 chr5 30065873 30066072 -169564078 - L1MEc LINE L1 -5779 266 77 235 270 40 80 chr5 30066699 30066799 -169563351 + MIR SINE MIR 59 154 -108 1860 179 36 22 chr5 30067361 30067718 -169562432 + THE1B LTR MaLR 3 364 0 21 0 0 0 chr5 30068372 30068393 -169561757 + AT_rich Low_complexity Low_complexity 1 21 0 6448 124 2 0 chr5 30069015 30070014 -169560136 - L1PA7 LINE L1 -2122 4024 3024 9003 102 19 5 chr5 30070014 30070687 -169559463 + L1PA7 LINE L1 4022 4684 -1470 243 0 0 0 chr5 30070687 30070714 -169559436 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9003 102 19 5 chr5 30070714 30072145 -169558005 + L1PA7 LINE L1 4684 6152 -2 770 260 6 6 chr5 30072614 30072787 -169557363 - MLT1D LTR MaLR -48 457 285 2298 59 3 0 chr5 30072819 30073122 -169557028 + L1PA4 LINE L1 5846 6149 -6 42 48 0 0 chr5 30074742 30074805 -169555345 + AT_rich Low_complexity Low_complexity 1 63 0 265 335 99 38 chr5 30075234 30075446 -169554704 + L2 LINE L2 2312 2536 -778 180 0 0 0 chr5 30076018 30076038 -169554112 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1728 147 0 70 chr5 30076040 30076353 -169553797 - AluSx SINE Alu -21 291 1 394 294 84 19 chr5 30076364 30076578 -169553572 + LTR16B LTR ERVL 224 451 -13 318 359 27 22 chr5 30076897 30077081 -169553069 + MIR SINE MIR 46 230 -32 222 221 29 15 chr5 30077125 30077193 -169552957 + (TTA)n Simple_repeat Simple_repeat 1 69 0 2617 187 104 56 chr5 30077613 30078325 -169551825 + LTR1 LTR ERV1 40 785 0 23 33 0 0 chr5 30078434 30078464 -169551686 + AT_rich Low_complexity Low_complexity 1 30 0 205 171 0 0 chr5 30079267 30079308 -169550842 + CT-rich Low_complexity Low_complexity 2 42 0 21 0 0 0 chr5 30080722 30080743 -169549407 + AT_rich Low_complexity Low_complexity 1 21 0 36 0 0 0 chr5 30081024 30081060 -169549090 + AT_rich Low_complexity Low_complexity 1 36 0 845 263 111 12 chr5 30081098 30081518 -169548632 + L1MC/D LINE L1 5161 5619 -740 2656 39 0 0 chr5 30082977 30083288 -169546862 - AluYb8 SINE Alu -5 313 3 249 258 23 17 chr5 30083295 30083400 -169546750 + A-rich Low_complexity Low_complexity 1 105 0 207 215 19 28 chr5 30083414 30083521 -169546629 + A-rich Low_complexity Low_complexity 4 109 0 302 315 0 0 chr5 30083573 30083681 -169546469 + A-rich Low_complexity Low_complexity 1 108 0 518 57 0 66 chr5 30083785 30083891 -169546259 + AluY SINE Alu 213 311 0 245 325 12 0 chr5 30083999 30084082 -169546068 - MIR SINE MIR -1 261 178 341 250 0 17 chr5 30084868 30084988 -169545162 + CT-rich Low_complexity Low_complexity 2 119 0 472 89 25 0 chr5 30084988 30085067 -169545083 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 328 299 106 15 chr5 30085696 30085871 -169544279 - L1ME LINE L1 -571 5591 5401 378 311 69 72 chr5 30085909 30086285 -169543865 - L1ME LINE L1 -2192 3954 3580 31 0 0 0 chr5 30086468 30086499 -169543651 + AT_rich Low_complexity Low_complexity 1 31 0 1337 37 0 0 chr5 30086500 30086663 -169543487 + L1PA5 LINE L1 5988 6150 -4 1387 222 80 5 chr5 30086685 30087037 -169543113 + MLT2D LTR ERVL 1 480 -40 292 134 60 0 chr5 30087048 30087115 -169543035 + (TATG)n Simple_repeat Simple_repeat 2 72 0 234 158 0 70 chr5 30087116 30087173 -169542977 + MLT2B2 LTR ERVL 459 511 -4 207 0 0 0 chr5 30088448 30088471 -169541679 + (TTG)n Simple_repeat Simple_repeat 2 24 0 661 354 86 3 chr5 30088715 30089051 -169541099 - ERVL LTR ERVL -1317 4447 4084 284 397 14 0 chr5 30089398 30089539 -169540611 - ERVL LTR ERVL -2055 3709 3567 453 373 89 19 chr5 30089576 30090126 -169540024 - ERVL LTR ERVL -1902 3094 2864 1828 164 0 0 chr5 30090650 30090925 -169539225 + AluSx SINE Alu 1 275 -37 857 113 0 7 chr5 30090930 30091072 -169539078 + (GAAA)n Simple_repeat Simple_repeat 3 143 0 228 213 37 37 chr5 30091112 30091248 -169538902 + (CGAAA)n Simple_repeat Simple_repeat 4 139 0 201 212 0 61 chr5 30091322 30091421 -169538729 + (AAGTG)n Simple_repeat Simple_repeat 5 97 0 292 320 48 81 chr5 30091568 30091840 -169538310 - ERVL LTR ERVL -3367 2287 2025 455 315 70 73 chr5 30092922 30093363 -169536787 - L1MEd LINE L1 -5111 1008 569 225 315 75 55 chr5 30093426 30093626 -169536524 - L1MEd LINE L1 -5605 514 311 439 193 237 0 chr5 30195210 30195345 -169434805 + L1MC3 LINE L1 1792 1958 -4468 1504 249 34 36 chr5 30195384 30195946 -169434204 + L1MC3 LINE L1 3098 3658 -2768 1939 252 66 5 chr5 30195946 30196703 -169433447 + L1MC3 LINE L1 4576 5378 -1048 1586 157 102 0 chr5 30196787 30197100 -169433050 - MER46B DNA MER2_type -16 220 1 534 199 6 50 chr5 30197132 30197293 -169432857 + L1MC3 LINE L1 5432 5585 -841 2619 185 17 106 chr5 30197295 30197563 -169432587 - L1 LINE L1 -773 5373 5083 1955 164 92 3 chr5 30197563 30197953 -169432197 - MSTB LTR MaLR -1 425 1 2619 185 17 106 chr5 30197953 30198437 -169431713 - L1 LINE L1 -1063 5083 4688 * 3986 194 19 0 chr5 30198429 30199185 -169430965 + L1PB4 LINE L1 5379 6148 -8 * 8808 195 49 93 chr5 30199181 30201761 -169428389 + L1MC3 LINE L1 5597 8064 -1 379 303 79 31 chr5 30202344 30202700 -169427450 + L1M4 LINE L1 2154 2526 -3620 206 368 73 26 chr5 30203017 30203251 -169426899 - L2 LINE L2 -1483 1831 1587 459 174 41 33 chr5 30204422 30204543 -169425607 + Tigger6a DNA MER2_type 366 487 -596 833 210 5 16 chr5 30204548 30204734 -169425416 + Tigger6a DNA MER2_type 899 1082 -1 272 235 15 29 chr5 30205055 30205123 -169425027 + MER94 DNA DNA 1 67 -67 23 97 0 0 chr5 30205174 30205246 -169424904 + AT_rich Low_complexity Low_complexity 1 72 0 22 56 0 0 chr5 30205416 30205452 -169424698 + AT_rich Low_complexity Low_complexity 1 36 0 555 256 118 7 chr5 30205487 30205776 -169424374 + MER114 LTR ERV 7 327 -321 462 227 8 30 chr5 30205782 30205914 -169424236 + AluJb SINE Alu 3 131 -181 269 246 170 29 chr5 30207759 30208036 -169422114 + L1ME4a LINE L1 5750 6065 -56 815 277 137 25 chr5 30208177 30208650 -169421500 + MLT1H LTR MaLR 1 526 -23 1860 145 102 3 chr5 30209160 30209492 -169420658 - MER47A DNA MER2_type -1 365 1 22 0 0 0 chr5 30209831 30209853 -169420297 + AT_rich Low_complexity Low_complexity 1 22 0 1085 303 72 35 chr5 30210376 30210803 -169419347 + MLT1H LTR MaLR 3 454 -95 1992 192 6 6 chr5 30210803 30211168 -169418982 - MLT1A1 LTR MaLR 0 365 1 1085 303 72 35 chr5 30211168 30211252 -169418898 + MLT1H LTR MaLR 454 533 -16 449 244 11 68 chr5 30211774 30211950 -169418200 + MER103 DNA DNA 1 166 0 190 264 102 148 chr5 30212279 30212414 -169417736 - MIR SINE MIR -1 261 138 717 215 0 0 chr5 30212414 30212544 -169417606 + FLAM_A SINE Alu 1 130 -3 190 264 102 148 chr5 30212544 30212624 -169417526 - MIR SINE MIR -124 138 56 464 252 29 14 chr5 30213192 30213331 -169416819 - L1MA10 LINE L1 -3 6331 6191 2131 147 44 49 chr5 30213331 30213759 -169416391 - MSTB LTR MaLR 0 426 1 8379 173 47 31 chr5 30213759 30214092 -169416058 - MSTB-int LTR MaLR 0 1651 1325 10386 40 1 1 chr5 30214092 30216134 -169414016 - L1PA4 LINE L1 0 6155 4112 8379 173 47 31 chr5 30216134 30217421 -169412729 - MSTB-int LTR MaLR -326 1325 5 1917 110 0 0 chr5 30217438 30217693 -169412457 - AluY SINE Alu -3 308 54 2427 176 7 16 chr5 30217694 30218119 -169412031 - MSTB LTR MaLR -5 421 1 745 214 35 12 chr5 30218201 30218234 -169411916 - L1ME1 LINE L1 -239 5927 5895 3634 193 62 7 chr5 30218234 30218391 -169411759 - L1MA3 LINE L1 -406 5899 5752 2018 127 96 8 chr5 30218391 30218777 -169411373 - L1MA3 LINE L1 0 6305 5886 3634 193 62 7 chr5 30218777 30219895 -169410255 - L1MA3 LINE L1 -553 5752 4561 327 126 35 81 chr5 30219895 30219950 -169410200 + THE1C LTR MaLR 1 51 -377 4497 111 27 31 chr5 30219950 30220962 -169409188 + MER11A LTR ERVK 1 1265 -1 1496 163 34 37 chr5 30220963 30221289 -169408861 + THE1C LTR MaLR 51 375 0 4444 188 36 8 chr5 30221289 30222215 -169407935 - L1MA3 LINE L1 -1581 4565 3614 316 212 114 0 chr5 30222303 30222422 -169407728 - L1ME4a LINE L1 -266 5855 5715 3083 42 3 0 chr5 30222570 30222951 -169407199 - L1PA4 LINE L1 0 6155 5774 1826 140 27 71 chr5 30222954 30223319 -169406831 - THE1C LTR MaLR -26 349 1 8871 144 32 41 chr5 30223319 30224913 -169405237 - THE1C-int LTR MaLR 0 1580 1 1998 157 10 63 chr5 30224913 30225309 -169404841 - THE1C LTR MaLR 0 375 1 1432 236 55 18 chr5 30225309 30225424 -169404726 - L1MA3 LINE L1 -2528 3618 3509 2021 158 44 3 chr5 30225424 30225784 -169404366 - THE1C LTR MaLR 0 375 1 9444 132 32 38 chr5 30225784 30227373 -169402777 - THE1C-int LTR MaLR 0 1580 1 2211 150 27 3 chr5 30227373 30227739 -169402411 - THE1C LTR MaLR 0 375 1 1432 236 55 18 chr5 30227739 30228079 -169402071 - L1MA3 LINE L1 -2636 3510 3144 2709 34 0 0 chr5 30228089 30228411 -169401739 - L1PA4 LINE L1 -5 6150 5829 1350 19 0 0 chr5 30228415 30228577 -169401573 + L1P2 LINE L1 5307 5468 -687 967 272 31 4 chr5 30228575 30228836 -169401314 - L1MEc LINE L1 -6089 307 40 * 187 352 131 28 chr5 30228980 30229125 -169401025 - L2 LINE L2 -4 3309 3150 227 274 14 27 chr5 30229185 30229258 -169400892 + L2 LINE L2 3224 3295 -18 595 117 11 0 chr5 30229550 30229644 -169400506 - L1PA7 LINE L1 -3 6151 6057 596 108 0 0 chr5 30229644 30229730 -169400420 + L1PA7 LINE L1 5978 6066 -88 263 28 28 0 chr5 30229843 30229879 -169400271 + (TG)n Simple_repeat Simple_repeat 1 37 0 198 284 64 37 chr5 30229891 30230000 -169400150 - L2 LINE L2 -461 2853 2742 203 211 0 26 chr5 30230468 30230544 -169399606 + (TATATG)n Simple_repeat Simple_repeat 6 79 0 2016 52 36 62 chr5 30230987 30231294 -169398856 - AluY SINE Alu -12 299 1 21 0 0 0 chr5 30232035 30232056 -169398094 + AT_rich Low_complexity Low_complexity 1 21 0 204 118 29 0 chr5 30232318 30232352 -169397798 + (TGG)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr5 30233410 30233433 -169396717 + AT_rich Low_complexity Low_complexity 1 23 0 2132 115 3 7 chr5 30234066 30234370 -169395780 + AluSc SINE Alu 1 303 -6 296 276 97 52 chr5 30235193 30235327 -169394823 - L1P LINE L1 -1921 4225 4086 724 283 45 0 chr5 30236448 30236625 -169393525 - MER5A DNA MER1_type 0 189 5 269 222 16 0 chr5 30236952 30237015 -169393135 + MER96 DNA MER1_type? 3 66 -109 254 339 122 29 chr5 30239298 30239684 -169390466 + L2 LINE L2 1636 2057 -1257 312 389 116 19 chr5 30239802 30240267 -169389883 + L2 LINE L2 2376 2885 -429 5016 177 48 32 chr5 30240335 30241323 -169388827 - L1MA9 LINE L1 -1 6311 5341 180 0 0 0 chr5 30241323 30241343 -169388807 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5016 177 48 32 chr5 30241343 30241482 -169388668 - L1MA9 LINE L1 -971 5341 5206 1931 164 3 0 chr5 30241482 30241792 -169388358 - AluJb SINE Alu -1 311 1 5016 177 48 32 chr5 30241792 30241895 -169388255 - L1MA9 LINE L1 -1106 5206 5052 37 0 0 0 chr5 30242058 30242095 -169388055 + AT_rich Low_complexity Low_complexity 1 37 0 238 333 205 0 chr5 30242128 30242245 -169387905 + L2 LINE L2 3117 3257 -15 21 36 0 0 chr5 30243655 30243683 -169386467 + AT_rich Low_complexity Low_complexity 1 28 0 1167 118 23 27 chr5 30243685 30243905 -169386245 - L1MA8 LINE L1 -20 6271 6053 2179 131 19 25 chr5 30244261 30244627 -169385523 - THE1B LTR MaLR 0 364 1 11525 93 13 9 chr5 30244627 30245422 -169384728 - THE1B-int LTR MaLR 0 1580 773 1965 204 64 21 chr5 30245422 30245906 -169384244 - LTR22 LTR ERVK -4 505 1 11525 93 13 9 chr5 30245906 30246683 -169383467 - THE1B-int LTR MaLR -807 773 1 2230 113 19 38 chr5 30246683 30247054 -169383096 - THE1B LTR MaLR 0 364 1 776 165 110 18 chr5 30247480 30247644 -169382506 + AluJb SINE Alu 130 308 -4 22 0 0 0 chr5 30248284 30248306 -169381844 + AT_rich Low_complexity Low_complexity 1 22 0 212 200 43 43 chr5 30248854 30248924 -169381226 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 27 29 0 0 chr5 30249590 30249624 -169380526 + AT_rich Low_complexity Low_complexity 1 34 0 287 271 200 53 chr5 30249719 30249889 -169380261 - MIR SINE MIR -8 254 60 185 301 0 55 chr5 30250035 30250108 -169380042 - MIR SINE MIR -116 146 78 502 328 107 12 chr5 30250384 30250637 -169379513 + MLT1K LTR MaLR 147 423 -165 343 99 14 42 chr5 30250828 30250899 -169379251 + (TCCC)n Simple_repeat Simple_repeat 2 70 0 1567 187 29 0 chr5 30250907 30251185 -169378965 - AluJo SINE Alu -26 286 1 1533 74 42 0 chr5 30251201 30251416 -169378734 - L1PA6 LINE L1 0 6154 5931 28 0 0 0 chr5 30251591 30251619 -169378531 + AT_rich Low_complexity Low_complexity 1 28 0 30 59 0 0 chr5 30252258 30252309 -169377841 + AT_rich Low_complexity Low_complexity 1 51 0 228 351 82 34 chr5 30253637 30253990 -169376160 + L2 LINE L2 1817 2186 -1128 295 296 113 0 chr5 30254056 30254171 -169375979 - MIR SINE MIR -18 244 117 202 79 79 0 chr5 30254182 30254245 -169375905 + (TA)n Simple_repeat Simple_repeat 1 68 0 47 0 0 0 chr5 30254288 30254335 -169375815 + AT_rich Low_complexity Low_complexity 1 47 0 732 60 28 39 chr5 30254335 30254517 -169375633 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 2017 173 37 44 chr5 30255029 30255590 -169374560 - MLT2A2 LTR ERVL 0 554 1 2441 116 19 16 chr5 30255740 30256112 -169374038 - THE1C LTR MaLR -2 373 1 1284 256 39 22 chr5 30256220 30256583 -169373567 + MLT1A2 LTR MaLR 1 369 -5 264 267 139 0 chr5 30256902 30257003 -169373147 - MIR SINE MIR -11 251 137 466 305 100 36 chr5 30257155 30257927 -169372223 + L1MEd LINE L1 861 1732 -4578 291 363 16 8 chr5 30257964 30258088 -169372062 - MIR SINE MIR -111 151 27 286 346 33 27 chr5 30258199 30258373 -169371777 + MIR SINE MIR 19 193 -63 1865 187 22 6 chr5 30258420 30258779 -169371371 + MLT1A1 LTR MaLR 1 365 0 393 250 4 123 chr5 30259244 30259504 -169370646 - L2 LINE L2 -1 3312 3084 240 137 0 0 chr5 30259956 30260007 -169370143 - LTR66 LTR ERVL -166 444 394 186 133 0 0 chr5 30260013 30260043 -169370107 + (TA)n Simple_repeat Simple_repeat 2 31 0 1166 259 114 34 chr5 30260106 30260546 -169369604 - MLT1D LTR MaLR 0 505 31 24 0 0 0 chr5 30261036 30261060 -169369090 + AT_rich Low_complexity Low_complexity 1 24 0 1348 198 24 11 chr5 30263075 30263402 -169366748 + MER47B DNA MER2_type 1 379 -39 771 142 24 8 chr5 30263390 30263517 -169366633 + Tigger5 DNA MER2_type 2194 2322 -1 * 378 293 73 7 chr5 30263646 30263796 -169366354 + MLT1I LTR MaLR 100 259 -150 238 239 15 15 chr5 30264238 30264305 -169365845 + CT-rich Low_complexity Low_complexity 2 68 0 3188 28 3 5 chr5 30264419 30264808 -169365342 - L1PA4 LINE L1 0 6155 5768 2074 141 34 3 chr5 30266014 30266341 -169363809 + MER1B DNA MER1_type 1 337 0 646 301 69 0 chr5 30267471 30267687 -169362463 + MIR SINE MIR 1 231 -31 2460 47 0 28 chr5 30269390 30269710 -169360440 + AluY SINE Alu 1 311 0 198 0 0 0 chr5 30269822 30269844 -169360306 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 28 48 0 0 chr5 30270520 30270562 -169359588 + AT_rich Low_complexity Low_complexity 1 42 0 192 349 0 0 chr5 30271003 30271069 -169359081 - L2 LINE L2 -1066 2248 2183 480 270 80 44 chr5 30271095 30271321 -169358829 - MIR SINE MIR -17 245 12 228 100 0 0 chr5 30272030 30272070 -169358080 + (CA)n Simple_repeat Simple_repeat 2 41 0 314 341 49 0 chr5 30272251 30272374 -169357776 + MIR SINE MIR 32 160 -102 25 0 0 0 chr5 30272875 30272900 -169357250 + AT_rich Low_complexity Low_complexity 1 25 0 29 70 0 0 chr5 30274189 30274246 -169355904 + AT_rich Low_complexity Low_complexity 1 57 0 213 121 0 0 chr5 30274768 30274801 -169355349 + (T)n Simple_repeat Simple_repeat 1 33 0 2594 220 109 18 chr5 30275055 30275815 -169354335 - L1ME1 LINE L1 -7 6159 5331 22 0 0 0 chr5 30275837 30275859 -169354291 + AT_rich Low_complexity Low_complexity 1 22 0 2457 232 106 34 chr5 30276109 30277014 -169353136 - L1ME2 LINE L1 -71 6093 5091 2540 51 0 3 chr5 30277014 30277325 -169352825 + AluY SINE Alu 1 310 -1 2457 232 106 34 chr5 30277325 30277509 -169352641 - L1ME2 LINE L1 -1073 5091 4922 200 288 63 36 chr5 30279482 30279593 -169350557 + MER5A DNA MER1_type 1 114 -75 395 346 118 7 chr5 30281558 30281838 -169348312 - LTR33A LTR ERVL 0 523 213 311 244 13 0 chr5 30282096 30282174 -169347976 + MER116 DNA Mariner 2 80 0 290 346 39 15 chr5 30282313 30282443 -169347707 + L2 LINE L2 3180 3312 -1 25 31 0 0 chr5 30282512 30282544 -169347606 + AT_rich Low_complexity Low_complexity 1 32 0 1797 222 35 78 chr5 30282736 30283313 -169346837 - MLT2B3 LTR ERVL 0 554 3 301 71 71 0 chr5 30284063 30284133 -169346017 + (TA)n Simple_repeat Simple_repeat 2 76 0 2212 165 22 15 chr5 30286227 30286632 -169343518 + MER21-int LTR ERV1 3742 4149 -42 284 256 0 13 chr5 30286711 30286789 -169343361 + (TA)n Simple_repeat Simple_repeat 2 78 0 382 250 40 0 chr5 30286797 30286897 -169343253 + MER21B LTR ERV1 245 348 -515 10870 210 28 39 chr5 30286898 30290864 -169339286 + L1MB1 LINE L1 2246 6167 -1 363 260 86 60 chr5 30290893 30291208 -169338942 + L1ME4a LINE L1 5793 6115 -6 27 81 0 0 chr5 30291664 30291726 -169338424 + AT_rich Low_complexity Low_complexity 1 62 0 217 291 23 23 chr5 30292561 30292647 -169337503 - MIR SINE MIR -120 142 57 32 0 0 0 chr5 30292795 30292827 -169337323 + AT_rich Low_complexity Low_complexity 1 32 0 26 30 0 0 chr5 30293444 30293477 -169336673 + AT_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr5 30293764 30293809 -169336341 + AT_rich Low_complexity Low_complexity 1 45 0 288 0 0 0 chr5 30294135 30294167 -169335983 + (TG)n Simple_repeat Simple_repeat 1 32 0 295 323 134 12 chr5 30294965 30295219 -169334931 + MARNA DNA Mariner 84 368 -218 192 250 0 0 chr5 30295231 30295275 -169334875 + L2 LINE L2 3269 3312 -1 38 61 0 30 chr5 30295410 30295509 -169334641 + AT_rich Low_complexity Low_complexity 1 96 0 231 146 0 0 chr5 30295800 30295841 -169334309 + (TG)n Simple_repeat Simple_repeat 2 42 0 183 129 0 0 chr5 30295853 30295884 -169334266 + (CA)n Simple_repeat Simple_repeat 2 32 0 28 0 0 0 chr5 30296394 30296422 -169333728 + AT_rich Low_complexity Low_complexity 1 28 0 543 138 46 0 chr5 30296425 30296512 -169333638 + AluSg/x SINE Alu 180 270 -40 201 39 0 0 chr5 30296513 30296539 -169333611 + (TC)n Simple_repeat Simple_repeat 2 27 0 2873 150 38 2 chr5 30296732 30297212 -169332938 + LOR1a LTR ERV1 1 497 0 263 285 100 0 chr5 30297746 30297876 -169332274 + MER103 DNA DNA 22 164 -2 27 62 0 0 chr5 30298766 30298814 -169331336 + AT_rich Low_complexity Low_complexity 1 48 0 302 262 102 97 chr5 30298853 30299295 -169330855 + HAL1 LINE L1 2062 2505 -2 519 100 0 0 chr5 30299550 30299620 -169330530 + LOR1a LTR ERV1 428 497 0 24 77 0 0 chr5 30299767 30299819 -169330331 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 30301455 30301476 -169328674 + AT_rich Low_complexity Low_complexity 1 21 0 6569 64 22 6 chr5 30301646 30302701 -169327449 - L1PA7 LINE L1 0 6154 5076 3959 90 11 4 chr5 30302704 30303261 -169326889 + L1PA7 LINE L1 4530 5090 -1056 1665 280 43 16 chr5 30303461 30304158 -169325992 - L1ME1 LINE L1 -216 5968 5254 245 369 26 55 chr5 30304150 30304532 -169325618 + L1MB2 LINE L1 417 787 -5516 * 2628 238 61 51 chr5 30304617 30305567 -169324583 + L1MB2 LINE L1 779 1636 -4729 1892 142 4 0 chr5 30305567 30305842 -169324308 + AluSx SINE Alu 1 276 -36 2628 238 61 51 chr5 30305842 30306059 -169324091 + L1MB2 LINE L1 1636 1849 -4516 252 167 25 133 chr5 30306084 30306204 -169323946 + L1MB2 LINE L1 2001 2107 -4277 * 5387 219 27 29 chr5 30306196 30307670 -169322480 + L1MB2 LINE L1 4035 5510 -897 4745 63 10 0 chr5 30307670 30308286 -169321864 + L1PA8 LINE L1 5542 6163 -9 5387 219 27 29 chr5 30308286 30308593 -169321557 + L1MB2 LINE L1 5510 5816 -591 2311 120 76 25 chr5 30308593 30309000 -169321150 + MSTA LTR MaLR 1 428 0 5387 219 27 29 chr5 30309000 30309045 -169321105 + L1MB2 LINE L1 5816 5860 -547 1935 170 18 12 chr5 30309045 30309380 -169320770 - MER1B DNA MER1_type 0 337 1 5387 219 27 29 chr5 30309380 30309716 -169320434 + L1MB2 LINE L1 5860 6199 -208 1977 130 7 7 chr5 30309716 30310024 -169320126 + AluSx SINE Alu 5 312 0 5387 219 27 29 chr5 30310024 30310223 -169319927 + L1MB2 LINE L1 6199 6397 -10 1045 255 95 19 chr5 30310233 30310708 -169319442 - L1MEc LINE L1 -1046 5169 4659 290 277 11 0 chr5 30310852 30310946 -169319204 - L1MEc LINE L1 -1783 4432 4338 480 324 36 0 chr5 30311085 30311335 -169318815 - L1MEc LINE L1 -2620 3595 3337 491 233 44 61 chr5 30311366 30311546 -169318604 - AluJo SINE Alu -23 289 113 965 266 97 19 chr5 30311551 30312036 -169318114 - L1MEc LINE L1 -2946 3269 2747 2373 124 3 0 chr5 30312039 30312403 -169317747 + L1P LINE L1 4730 5094 -1052 486 120 0 0 chr5 30312428 30312503 -169317647 + L1PA11 LINE L1 6100 6174 0 982 241 14 9 chr5 30312533 30312753 -169317397 - MLT1C LTR MaLR 0 467 247 628 289 86 84 chr5 30312755 30313264 -169316886 + MER34 LTR ERV1 3 512 -30 437 193 96 72 chr5 30313373 30313539 -169316611 - MLT1C LTR MaLR -292 175 6 2045 285 84 38 chr5 30313545 30314708 -169315442 - L1MEc LINE L1 -3479 2736 1627 5830 43 6 1 chr5 30314708 30315430 -169314720 - L1PA4 LINE L1 -3 6152 5428 2045 285 84 38 chr5 30315430 30315703 -169314447 - L1MEc LINE L1 -4588 1627 1368 1846 116 75 36 chr5 30315703 30316064 -169314086 + THE1C LTR MaLR 1 375 0 2045 285 84 38 chr5 30316064 30316838 -169313312 - L1MEc LINE L1 -4847 1368 468 723 298 49 78 chr5 30317007 30317497 -169312653 + L2 LINE L2 1304 1779 -1535 2154 121 13 52 chr5 30317497 30317885 -169312265 + MER4A LTR ERV1 1 373 -291 498 110 0 0 chr5 30317912 30317985 -169312165 + MER4A LTR ERV1 356 428 -236 1259 168 48 0 chr5 30318114 30318323 -169311827 + MER4A LTR ERV1 411 629 -35 2076 321 92 23 chr5 30318337 30319451 -169310699 + L2 LINE L2 1775 2964 -350 802 166 0 14 chr5 30319756 30319895 -169310255 - FLAM_C SINE Alu -6 137 1 25 51 0 0 chr5 30319899 30319938 -169310212 + AT_rich Low_complexity Low_complexity 1 39 0 311 250 54 71 chr5 30321509 30321621 -169308529 + MER5B DNA MER1_type 69 178 0 1999 129 19 26 chr5 30322155 30322466 -169307684 - AluSx SINE Alu -3 309 1 542 178 15 104 chr5 30325159 30325294 -169304856 + AluSq/x SINE Alu 5 127 -186 7068 53 8 0 chr5 30325302 30326404 -169303746 + L1PA6 LINE L1 5057 6164 0 2255 107 48 22 chr5 30326652 30327007 -169303143 + THE1B LTR MaLR 1 364 0 3803 138 19 7 chr5 30327321 30327938 -169302212 - MER41B LTR ERV1 -8 627 3 21 0 0 0 chr5 30328095 30328116 -169302034 + AT_rich Low_complexity Low_complexity 1 21 0 2651 155 69 42 chr5 30330414 30330993 -169299157 - LTR49 LTR ERV1 0 595 1 2387 136 29 15 chr5 30330993 30331405 -169298745 - LTR49-int LTR ERV1 0 6331 5914 2217 142 145 91 chr5 30331412 30332019 -169298131 + MER4A LTR ERV1 1 640 -24 2177 134 31 0 chr5 30332019 30332369 -169297781 + THE1B LTR MaLR 1 361 -3 1673 176 25 6 chr5 30332372 30332695 -169297455 + THE1B-int LTR MaLR 1 329 -1251 413 18 0 18 chr5 30334219 30334274 -169295876 + (TG)n Simple_repeat Simple_repeat 2 55 0 2252 217 20 40 chr5 30334290 30334843 -169295307 - MLT1E2 LTR MaLR -2 624 83 257 317 73 8 chr5 30334763 30334886 -169295264 - MLT2C1 LTR ERVL -223 174 44 * 425 244 0 12 chr5 30336266 30336348 -169293802 + Tigger3(Golem) DNA MER2_type 2 82 -2947 1737 160 20 3 chr5 30336367 30336667 -169293483 + Tigger3(Golem) DNA MER2_type 2724 3028 -1 31 0 0 0 chr5 30337480 30337511 -169292639 + AT_rich Low_complexity Low_complexity 1 31 0 205 169 15 31 chr5 30337575 30337640 -169292510 + (TAA)n Simple_repeat Simple_repeat 1 64 0 228 67 0 0 chr5 30337933 30337963 -169292187 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 232 204 124 73 chr5 30337977 30338114 -169292036 - L1MC5 LINE L1 -31 7930 7787 201 307 80 0 chr5 30338603 30338678 -169291472 - L2 LINE L2 -1 3271 3191 185 285 95 51 chr5 30340303 30340440 -169289710 + MIR SINE MIR 120 262 0 242 161 0 36 chr5 30341456 30341512 -169288638 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 311 364 48 11 chr5 30341512 30341641 -169288509 + L1MC4 LINE L1 6617 6808 -1234 301 270 60 10 chr5 30341730 30341830 -169288320 + MIR SINE MIR 106 210 -52 334 175 52 41 chr5 30342626 30342723 -169287427 + MER103 DNA DNA 53 150 -16 250 276 16 0 chr5 30343806 30343875 -169286275 - MIR SINE MIR -68 140 70 234 93 0 23 chr5 30344210 30344253 -169285897 - L1ME3 LINE L1 -2 6160 6119 300 280 28 0 chr5 30344304 30344411 -169285739 - L1MC4 LINE L1 -146 7896 7787 850 75 0 0 chr5 30344753 30344859 -169285291 + AluY SINE Alu 1 106 -205 25 31 0 0 chr5 30345249 30345281 -169284869 + AT_rich Low_complexity Low_complexity 1 32 0 4358 180 22 55 chr5 30345281 30345447 -169284703 - L1MB5 LINE L1 -8 6166 5996 1774 187 16 27 chr5 30345447 30345816 -169284334 - MLT1A1 LTR MaLR 0 365 1 4358 180 22 55 chr5 30345816 30346899 -169283251 - L1MB5 LINE L1 -178 5996 4960 2344 62 7 0 chr5 30347425 30347738 -169282412 + AluY SINE Alu 1 311 0 2433 51 0 29 chr5 30347985 30348301 -169281849 + AluY SINE Alu 1 307 -4 1965 127 29 23 chr5 30349580 30349888 -169280262 - AluSq SINE Alu -3 310 1 374 204 11 34 chr5 30349931 30350019 -169280131 + MER81 DNA DNA 29 114 0 724 296 113 44 chr5 30350021 30350474 -169279676 - L1MC4 LINE L1 -259 7783 7300 1568 170 125 9 chr5 30350481 30350816 -169279334 - THE1C LTR MaLR -1 374 1 5100 129 26 22 chr5 30350816 30351630 -169278520 - THE1C-int LTR MaLR 0 1580 764 303 53 0 0 chr5 30351630 30351668 -169278482 - MSTA LTR MaLR -390 38 1 537 310 41 0 chr5 30351668 30351910 -169278240 - L1MC4 LINE L1 -755 7287 7036 1909 145 0 7 chr5 30351927 30352203 -169277947 - AluSx SINE Alu -9 303 30 791 234 9 50 chr5 30352203 30352416 -169277734 + AluJo SINE Alu 96 299 -13 855 218 154 4 chr5 30352420 30352686 -169277464 - L1MC4 LINE L1 -1278 6764 6459 631 282 29 0 chr5 30355554 30355728 -169274422 - MIR SINE MIR -2 260 82 5076 214 49 16 chr5 30355828 30357319 -169272831 + L1PA15-16 LINE L1 2762 4304 -2545 187 277 102 66 chr5 30358069 30358206 -169271944 + L2 LINE L2 3168 3309 -4 401 148 12 25 chr5 30358688 30358769 -169271381 + MER5B DNA MER1_type 99 178 0 245 201 54 0 chr5 30359472 30359554 -169270596 + L1MC4 LINE L1 7419 7494 -314 198 71 0 0 chr5 30359560 30359588 -169270562 + (CA)n Simple_repeat Simple_repeat 1 28 0 360 240 185 24 chr5 30359601 30359911 -169270239 + L1MC5 LINE L1 7654 8001 -41 197 211 70 0 chr5 30361543 30361600 -169268550 + MIR SINE MIR 104 164 -98 185 339 0 15 chr5 30361726 30361791 -169268359 + MIR SINE MIR 159 222 -40 2303 228 10 15 chr5 30361973 30362494 -169267656 + L1ME1 LINE L1 5600 6117 -49 6336 169 28 7 chr5 30362605 30364446 -169265704 - L1PBa LINE L1 -4440 1764 1 311 361 128 26 chr5 30364688 30365079 -169265071 + L2 LINE L2 2310 2740 -574 700 171 28 130 chr5 30365125 30365170 -169264980 + MLT1A1 LTR MaLR 1 49 -316 2148 131 0 0 chr5 30365170 30365467 -169264683 - AluSx SINE Alu -15 297 1 700 171 28 130 chr5 30365467 30365637 -169264513 + MLT1A1 LTR MaLR 49 194 -171 399 337 67 13 chr5 30366022 30366222 -169263928 - MIR SINE MIR -10 252 40 500 264 0 8 chr5 30366592 30366717 -169263433 - MIR SINE MIR 0 262 139 221 81 0 27 chr5 30366820 30366857 -169263293 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 499 263 20 40 chr5 30367156 30367308 -169262842 + MLT1J LTR MaLR 1 149 -362 347 206 0 0 chr5 30367449 30367522 -169262628 + MLT1J LTR MaLR 416 488 -23 414 385 42 26 chr5 30367532 30367837 -169262313 - L2 LINE L2 -224 3089 2782 32 75 0 0 chr5 30368397 30368464 -169261686 + AT_rich Low_complexity Low_complexity 1 67 0 29 28 0 0 chr5 30368633 30368669 -169261481 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr5 30368686 30368719 -169261431 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 30368905 30368926 -169261224 + AT_rich Low_complexity Low_complexity 1 21 0 290 305 23 8 chr5 30369042 30369173 -169260977 - HAL1 LINE L1 -121 2386 2254 22 35 0 0 chr5 30369512 30369541 -169260609 + AT_rich Low_complexity Low_complexity 1 29 0 559 244 126 51 chr5 30369833 30370087 -169260063 - HAL1 LINE L1 -651 1856 1584 23 33 0 0 chr5 30370488 30370518 -169259632 + AT_rich Low_complexity Low_complexity 1 30 0 2379 71 6 10 chr5 30370577 30370888 -169259262 + AluY SINE Alu 1 310 -1 883 115 8 0 chr5 30371117 30371247 -169258903 - L1MA2 LINE L1 0 6304 6174 329 318 86 13 chr5 30371424 30371575 -169258575 - L1ME3 LINE L1 -216 5946 5785 434 267 44 11 chr5 30422498 30422678 -169207472 - L1ME4a LINE L1 0 6121 5936 681 256 40 20 chr5 30423904 30424103 -169206047 + L2 LINE L2 3111 3313 0 247 325 0 51 chr5 30424194 30424311 -169205839 - MIR SINE MIR -62 200 90 331 386 90 5 chr5 30426039 30426228 -169203922 + MIR SINE MIR 14 218 -44 2069 125 0 3 chr5 30426410 30426698 -169203452 - AluSx SINE Alu -9 303 17 25 51 0 0 chr5 30426789 30426828 -169203322 + AT_rich Low_complexity Low_complexity 1 39 0 311 361 71 23 chr5 30426963 30427229 -169202921 - L1ME4a LINE L1 -267 5903 5625 196 345 239 7 chr5 30427235 30427377 -169202773 - MIR3 SINE MIR -8 200 26 217 303 0 30 chr5 30427522 30427588 -169202562 + MIR SINE MIR 23 86 -122 464 349 129 73 chr5 30427610 30428448 -169201702 + L2 LINE L2 2239 3144 -169 2733 182 2 0 chr5 30428448 30428914 -169201236 - MLT1C LTR MaLR 0 467 1 464 349 129 73 chr5 30428914 30429082 -169201068 + L2 LINE L2 3144 3301 -12 1851 168 26 3 chr5 30430904 30431244 -169198906 - MER7A DNA MER2_type 0 346 1 762 231 94 14 chr5 30431388 30431674 -169198476 + MER33 DNA MER1_type 16 324 0 2040 142 7 0 chr5 30431742 30432038 -169198112 + AluSx SINE Alu 1 298 -14 292 286 0 24 chr5 30432897 30432981 -169197169 - MIR3 SINE MIR -48 160 79 1128 263 62 27 chr5 30435781 30436229 -169193921 - LTR16B LTR ERVL 0 464 1 1959 334 68 56 chr5 30436338 30438727 -169191423 - HERVL LTR ERVL -328 5326 2601 3857 171 78 51 chr5 30439019 30439856 -169190294 - MER21A LTR ERV1 -72 859 1 1304 322 72 20 chr5 30439967 30440712 -169189438 - HERV16 LTR ERVL -3634 1362 579 1370 102 0 0 chr5 30440712 30440889 -169189261 + THE1B LTR MaLR 1 177 -187 3279 126 14 8 chr5 30440889 30441391 -169188759 + THE1B-int LTR MaLR 1076 1580 0 2587 98 3 8 chr5 30441391 30441757 -169188393 + THE1B LTR MaLR 1 364 0 318 354 49 25 chr5 30441963 30442248 -169187902 - HERV16 LTR ERVL -4656 340 49 644 330 29 13 chr5 30442294 30442600 -169187550 - LTR16B LTR ERVL 0 464 154 2021 145 0 3 chr5 30443117 30443421 -169186729 - AluSx SINE Alu -9 303 1 228 195 0 0 chr5 30444517 30444558 -169185592 - MLT2B1 LTR ERVL -8 512 472 15291 148 35 21 chr5 30444561 30447226 -169182924 + Tigger2 DNA MER2_type 11 2712 -6 1408 198 173 32 chr5 30447255 30447655 -169182495 - MLT2B1 LTR ERVL -63 457 2 815 231 0 0 chr5 30448681 30448854 -169181296 + FRAM SINE Alu 1 166 -10 2050 142 0 3 chr5 30448895 30449205 -169180945 + AluSp SINE Alu 1 309 -4 301 317 68 12 chr5 30449380 30449526 -169180624 - L2 LINE L2 0 3313 3156 198 0 0 0 chr5 30449526 30449548 -169180602 + (TG)n Simple_repeat Simple_repeat 1 22 0 301 317 68 12 chr5 30449548 30449562 -169180588 - L2 LINE L2 -157 3156 3144 1688 154 40 0 chr5 30449692 30449964 -169180186 + AluJb SINE Alu 1 283 -29 245 98 24 0 chr5 30449967 30450008 -169180142 + (TA)n Simple_repeat Simple_repeat 2 43 0 313 319 28 16 chr5 30450046 30450228 -169179922 + L1ME LINE L1 5476 5659 -462 258 236 28 14 chr5 30450262 30450334 -169179816 - Tigger5 DNA MER2_type 0 2323 2251 * 273 180 0 20 chr5 30450307 30450357 -169179793 - Tigger5 DNA MER2_type -2273 50 2 237 222 52 78 chr5 30450596 30450749 -169179401 + L1ME4a LINE L1 5970 6118 -3 24 32 0 0 chr5 30451363 30451394 -169178756 + AT_rich Low_complexity Low_complexity 1 31 0 278 265 0 51 chr5 30451464 30451562 -169178588 + L1MC4 LINE L1 6616 6708 -1334 637 333 56 5 chr5 30452702 30452918 -169177232 - MIR SINE MIR 0 262 36 646 326 60 5 chr5 30453426 30453641 -169176509 - MIR SINE MIR 0 262 36 437 312 110 21 chr5 30453869 30454106 -169176044 + MIR SINE MIR 5 262 0 30 45 0 0 chr5 30457264 30457308 -169172842 + AT_rich Low_complexity Low_complexity 1 44 0 288 0 0 0 chr5 30457976 30458008 -169172142 + (CA)n Simple_repeat Simple_repeat 2 33 0 31 0 0 0 chr5 30458189 30458220 -169171930 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr5 30458574 30458598 -169171552 + AT_rich Low_complexity Low_complexity 1 24 0 1666 269 86 50 chr5 30459340 30461191 -169168959 - L1ME3A LINE L1 -5 6165 4259 795 288 65 8 chr5 30461217 30461585 -169168565 - L1ME3A LINE L1 -1952 4194 3806 29737 119 19 57 chr5 30462267 30468668 -169161482 + L1PA7 LINE L1 12 6154 0 33 94 0 0 chr5 30469378 30469474 -169160676 + AT_rich Low_complexity Low_complexity 1 96 0 21 36 0 0 chr5 30469715 30469743 -169160407 + AT_rich Low_complexity Low_complexity 1 28 0 1413 194 7 31 chr5 30469970 30470279 -169159871 + AluJo SINE Alu 1 302 0 1055 157 0 0 chr5 30471134 30471306 -169158844 + FRAM SINE Alu 1 167 -9 1529 162 57 17 chr5 30471396 30471692 -169158458 + Tigger7 DNA MER2_type 196 503 -1984 819 133 6 110 chr5 30471714 30471854 -169158296 + Tigger7 DNA MER2_type 2333 2454 -33 2026 127 3 0 chr5 30471854 30472166 -169157984 + AluSx SINE Alu 1 313 0 819 133 6 110 chr5 30472166 30472197 -169157953 + Tigger7 DNA MER2_type 2454 2487 0 182 167 28 0 chr5 30472816 30472852 -169157298 + L2 LINE L2 3269 3305 -8 194 286 0 18 chr5 30473106 30473162 -169156988 - L2 LINE L2 0 3313 3259 256 282 12 0 chr5 30473945 30474030 -169156120 + (TA)n Simple_repeat Simple_repeat 1 86 0 201 325 16 16 chr5 30474130 30474253 -169155897 + (CATA)n Simple_repeat Simple_repeat 2 124 0 208 254 17 0 chr5 30474561 30474620 -169155530 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 287 287 16 31 chr5 30474679 30474808 -169155342 + (TATG)n Simple_repeat Simple_repeat 2 128 0 1539 176 13 89 chr5 30475852 30476243 -169153907 - MLT1A1 LTR MaLR -4 361 1 790 298 133 17 chr5 30476346 30476766 -169153384 - LTR33A LTR ERVL 0 523 55 24 0 0 0 chr5 30477212 30477236 -169152914 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr5 30478875 30478913 -169151237 + AT_rich Low_complexity Low_complexity 1 38 0 2668 200 12 12 chr5 30480044 30480533 -169149617 - MER70B LTR ERVL 0 578 90 767 206 6 24 chr5 30480529 30480694 -169149456 - MER70A LTR ERVL -310 162 1 * 22 56 0 0 chr5 30481768 30481804 -169148346 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 30481927 30481949 -169148201 + AT_rich Low_complexity Low_complexity 1 22 0 3127 180 36 30 chr5 30482057 30482850 -169147300 - L1M2 LINE L1 -743 5403 4652 4438 156 19 25 chr5 30482850 30483705 -169146445 + L1MA7 LINE L1 5440 6289 -2 3127 180 36 30 chr5 30483705 30483716 -169146434 - L1M2 LINE L1 -1494 4652 4643 380 375 119 19 chr5 30485393 30485705 -169144445 - L2 LINE L2 -1 3271 2929 275 271 65 61 chr5 30486551 30486772 -169143378 - MLT1L LTR MaLR -216 295 83 1214 155 0 10 chr5 30486898 30487105 -169143045 - L1PB4 LINE L1 0 6156 5952 956 269 52 55 chr5 30487806 30488170 -169141980 + MLT1G1 LTR MaLR 1 363 -232 500 253 88 24 chr5 30488403 30488573 -169141577 - MIR SINE MIR -10 252 72 311 301 16 32 chr5 30488840 30488963 -169141187 - L2 LINE L2 -4 3309 3189 214 418 34 20 chr5 30488964 30489110 -169141040 + L3 LINE CR1 1428 1575 -2 1920 140 3 7 chr5 30491472 30491772 -169138378 - AluSx SINE Alu -13 299 1 201 337 102 39 chr5 30492063 30492318 -169137832 - L2 LINE L2 -35 3237 2967 289 201 4 0 chr5 30492908 30492973 -169137177 - AluJ/monomer SINE Alu -2 300 245 284 296 16 56 chr5 30493124 30493249 -169136901 + MIR SINE MIR 21 140 -122 2347 94 0 0 chr5 30493261 30493568 -169136582 + AluY SINE Alu 1 307 -4 21 36 0 0 chr5 30493965 30493993 -169136157 + AT_rich Low_complexity Low_complexity 1 28 0 237 320 89 36 chr5 30494182 30494407 -169135743 + L2 LINE L2 2659 2895 -419 489 282 13 19 chr5 30494594 30494831 -169135319 - MLT1K LTR MaLR -181 407 148 213 139 0 23 chr5 30495080 30495123 -169135027 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 188 260 0 26 chr5 30495413 30495490 -169134660 + A-rich Low_complexity Low_complexity 1 75 0 186 43 0 0 chr5 30498972 30498995 -169131155 + (CA)n Simple_repeat Simple_repeat 2 24 0 967 164 0 0 chr5 30499011 30499157 -169130993 - FRAM SINE Alu -29 147 2 705 134 67 8 chr5 30499199 30499333 -169130817 - FLAM_C SINE Alu -1 142 1 287 333 0 0 chr5 30499505 30499589 -169130561 + L2 LINE L2 3227 3310 -3 1118 305 92 10 chr5 30499612 30500091 -169130059 + LTR33 LTR ERVL 1 518 -3 42 48 0 0 chr5 30500594 30500657 -169129493 + AT_rich Low_complexity Low_complexity 1 63 0 3250 103 0 5 chr5 30502008 30502454 -169127696 - MLT2A1 LTR ERVL 0 444 1 341 363 30 6 chr5 30502462 30502630 -169127520 - L1M4 LINE L1 -3317 2829 2658 288 224 0 0 chr5 30502635 30502702 -169127448 + (CATA)n Simple_repeat Simple_repeat 2 68 0 21 0 0 0 chr5 30502780 30502801 -169127349 + AT_rich Low_complexity Low_complexity 1 21 0 5397 195 27 9 chr5 30503159 30505163 -169124987 - L1PA16 LINE L1 0 6869 4778 7503 32 5 2 chr5 30505168 30506346 -169123804 - L1PA2 LINE L1 -1 6154 4976 3553 208 55 10 chr5 30506450 30507418 -169122732 - L1 LINE L1 -1061 5085 4075 31610 30 4 2 chr5 30507423 30512093 -169118057 - L1PA2 LINE L1 -2 6153 1473 31407 39 36 2 chr5 30512193 30516153 -169113997 - L1P LINE L1 -2047 4099 5 12107 190 16 42 chr5 30516150 30520018 -169110132 - L1PA16 LINE L1 -2064 4785 961 * 216 0 0 0 chr5 30520024 30520048 -169110102 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 880 269 93 48 chr5 30520525 30520922 -169109228 - MER90 LTR ERV1 -160 415 1 237 289 125 66 chr5 30521710 30521862 -169108288 + MIR SINE MIR 54 214 -48 229 276 17 0 chr5 30523556 30523614 -169106536 - L2 LINE L2 0 3272 3214 30 45 0 0 chr5 30524573 30524617 -169105533 + AT_rich Low_complexity Low_complexity 1 44 0 217 327 0 40 chr5 30524842 30524943 -169105207 - L2 LINE L2 -333 2939 2843 9217 113 5 9 chr5 30524981 30527051 -169103099 + L1PA10 LINE L1 3900 5961 -207 351 350 101 13 chr5 30527179 30527567 -169102583 + L2 LINE L2 1612 2033 -1281 266 348 119 37 chr5 30527625 30528004 -169102146 + L2 LINE L2 2225 2634 -680 1470 204 3 40 chr5 30528534 30528857 -169101293 - AluJo SINE Alu -1 311 1 310 331 31 19 chr5 30529193 30529353 -169100797 + L2 LINE L2 2239 2400 -914 1663 158 135 14 chr5 30529519 30529867 -169100283 - MLT1B LTR MaLR 0 390 1 475 303 56 17 chr5 30529970 30530286 -169099864 + LTR67 LTR ERVL 199 556 -1 368 305 54 0 chr5 30530815 30530950 -169099200 - MIR SINE MIR -67 141 18 218 355 98 33 chr5 30530955 30531138 -169099012 + L2 LINE L2 2887 3081 -191 23 0 0 0 chr5 30532174 30532197 -169097953 + AT_rich Low_complexity Low_complexity 1 23 0 338 267 164 50 chr5 30532995 30533257 -169096893 - L2 LINE L2 -14 3299 3008 2368 100 0 0 chr5 30533583 30533893 -169096257 - AluSx SINE Alu -2 310 1 2110 116 0 29 chr5 30534473 30534784 -169095366 + AluSx SINE Alu 1 302 -10 1903 130 13 10 chr5 30535716 30536017 -169094133 - AluSx SINE Alu -10 302 1 1349 329 109 46 chr5 30536286 30536541 -169093609 - L2 LINE L2 -687 2627 2390 1456 177 93 35 chr5 30536541 30536886 -169093264 + MLT1A1 LTR MaLR 1 365 0 1349 329 109 46 chr5 30536886 30537855 -169092295 - L2 LINE L2 -924 2390 1325 295 286 184 51 chr5 30537921 30538176 -169091974 - MLT1J LTR MaLR -212 299 11 185 91 0 30 chr5 30538204 30538237 -169091913 + (GA)n Simple_repeat Simple_repeat 1 32 0 1394 253 107 38 chr5 30538332 30538363 -169091787 - L2 LINE L2 -275 3038 3011 1869 173 0 3 chr5 30538363 30538658 -169091492 + AluJb SINE Alu 1 294 -18 1394 253 107 38 chr5 30538658 30539262 -169090888 - L2 LINE L2 -302 3011 2304 663 300 67 0 chr5 30539363 30539573 -169090577 - MER58A DNA MER1_type 0 224 1 475 295 15 50 chr5 30539660 30539921 -169090229 - MER113 DNA MER1_type? -42 479 228 21 0 0 0 chr5 30540094 30540115 -169090035 + AT_rich Low_complexity Low_complexity 1 21 0 394 257 140 42 chr5 30540453 30540643 -169089507 + MER69 DNA AcHobo 2 2524 -2 572 283 52 82 chr5 30540843 30541172 -169088978 + L2 LINE L2 2957 3275 -38 349 203 16 0 chr5 30541204 30541268 -169088882 - L2 LINE L2 -13 3300 3236 304 302 120 106 chr5 30541411 30541686 -169088464 + L3 LINE CR1 1294 1572 -5 246 231 0 0 chr5 30541695 30541747 -169088403 - L2 LINE L2 0 3313 3262 1034 240 39 4 chr5 30543287 30543516 -169086634 - MIR SINE MIR -12 250 14 247 269 31 13 chr5 30544652 30544744 -169085406 + MIR SINE MIR 54 149 -59 196 276 40 40 chr5 30544813 30544889 -169085261 - MIR SINE MIR -108 154 79 368 294 25 0 chr5 30545438 30545557 -169084593 - MIR3 SINE MIR -2 206 85 2665 107 0 0 chr5 30545731 30546095 -169084055 - THE1B LTR MaLR 0 364 1 297 189 32 0 chr5 30546952 30547047 -169083103 + (TA)n Simple_repeat Simple_repeat 2 99 0 276 91 0 0 chr5 30547504 30547548 -169082602 + (CACAA)n Simple_repeat Simple_repeat 4 47 0 2234 212 75 0 chr5 30548969 30549446 -169080704 + MLT2B2 LTR ERVL 1 513 -2 395 202 150 58 chr5 30550464 30550637 -169079513 - L2 LINE L2 -1 3312 3124 290 258 54 60 chr5 30550879 30551046 -169079104 - MER103 DNA DNA 0 166 1 247 345 62 0 chr5 30551781 30551894 -169078256 - LTR33A LTR ERVL -333 190 71 2241 119 3 0 chr5 30552185 30552497 -169077653 + AluSq SINE Alu 1 313 0 1012 194 57 134 chr5 30552885 30553303 -169076847 - MLT1B LTR MaLR -4 386 1 847 236 139 78 chr5 30553769 30553833 -169076317 + MLT1A1 LTR MaLR 1 60 -305 1447 170 38 60 chr5 30553833 30554180 -169075970 - MER44D DNA MER2_type 0 609 1 847 236 139 78 chr5 30554180 30554459 -169075691 + MLT1A1 LTR MaLR 60 365 0 467 91 26 0 chr5 30554696 30554773 -169075377 - L1PA7 LINE L1 0 6154 6076 1986 124 25 0 chr5 30554805 30555103 -169075047 + AluSx SINE Alu 1 305 0 284 303 45 0 chr5 30555214 30555303 -169074847 + L2 LINE L2 3177 3269 -3 1886 217 73 26 chr5 30556301 30556795 -169073355 - LTR40a LTR ERVL 0 519 3 474 118 0 0 chr5 30556915 30557008 -169073142 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 237 175 18 0 chr5 30557063 30557120 -169073030 + (TA)n Simple_repeat Simple_repeat 2 59 0 200 301 48 78 chr5 30557455 30557558 -169072592 - MER5A DNA MER1_type -3 186 87 279 189 27 40 chr5 30557861 30557935 -169072215 + MLT1E LTR MaLR 442 514 -79 225 238 0 0 chr5 30558121 30558201 -169071949 + GA-rich Low_complexity Low_complexity 2 81 0 604 364 73 36 chr5 30560041 30560714 -169069436 + L2 LINE L2 2042 2739 -575 239 305 114 70 chr5 30560818 30561090 -169069060 + L2 LINE L2 2973 3256 -16 191 296 62 62 chr5 30561129 30561210 -169068940 + L2 LINE L2 2610 2690 -624 386 219 10 0 chr5 30564419 30564515 -169065635 - L1ME LINE L1 -347 5817 5721 261 264 101 54 chr5 30565288 30565417 -169064733 + L2 LINE L2 3173 3307 -6 183 42 0 0 chr5 30565648 30565672 -169064478 + (T)n Simple_repeat Simple_repeat 1 24 0 1674 302 101 30 chr5 30565750 30566380 -169063770 + L2 LINE L2 1784 2511 -803 2439 37 40 0 chr5 30566380 30566679 -169063471 - AluY SINE Alu 0 311 1 1674 302 101 30 chr5 30566679 30567034 -169063116 + L2 LINE L2 2511 2839 -475 410 312 115 17 chr5 30567128 30567362 -169062788 + MIR SINE MIR 3 259 -3 346 281 168 58 chr5 30567427 30567701 -169062449 + L2 LINE L2 2995 3298 -15 22 0 0 0 chr5 30568442 30568464 -169061686 + AT_rich Low_complexity Low_complexity 1 22 0 1594 284 67 58 chr5 30568469 30569589 -169060561 - L1ME3A LINE L1 -17 6153 5015 2003 119 14 14 chr5 30569589 30569884 -169060266 - AluSx SINE Alu -17 295 1 1594 284 67 58 chr5 30569884 30569937 -169060213 - L1ME3A LINE L1 -1155 5015 4964 7750 21 6 0 chr5 30570039 30571130 -169059020 - L1PA2 LINE L1 0 6155 5063 360 409 18 0 chr5 30571872 30572097 -169058053 - L2 LINE L2 -217 3055 2827 381 305 61 115 chr5 30572126 30572621 -169057529 - L2 LINE L2 -673 2641 2174 427 189 142 14 chr5 30573355 30573503 -169056647 - MER20 DNA MER1_type -4 215 49 1861 168 8 55 chr5 30575084 30575466 -169054684 - THE1B LTR MaLR 0 364 1 262 190 121 0 chr5 30576306 30576364 -169053786 + MIR SINE MIR 11 75 -187 490 285 23 0 chr5 30576415 30576545 -169053605 + MER117 DNA MER1_type 65 197 0 225 0 0 0 chr5 30578476 30578501 -169051649 + (CAA)n Simple_repeat Simple_repeat 2 26 0 194 0 39 0 chr5 30578501 30578527 -169051623 + (CA)n Simple_repeat Simple_repeat 1 27 0 226 254 63 0 chr5 30578539 30578602 -169051548 - HsTC2 DNA Tc2 -1808 90 24 474 276 133 41 chr5 30578835 30579204 -169050946 - MLT1J1 LTR MaLR -43 403 1 600 234 0 8 chr5 30581055 30581179 -169048971 - MER94 DNA DNA 0 134 12 2238 107 0 0 chr5 30581264 30581573 -169048577 - AluSq SINE Alu -1 312 4 23 33 0 0 chr5 30581773 30581803 -169048347 + AT_rich Low_complexity Low_complexity 1 30 0 296 197 118 0 chr5 30581865 30581941 -169048209 - MER96 DNA MER1_type? -12 163 79 236 337 84 0 chr5 30582156 30582251 -169047899 + L2 LINE L2 3202 3304 -9 203 257 14 40 chr5 30584175 30584249 -169045901 + MIR SINE MIR 136 207 -55 23 0 0 0 chr5 30586897 30586920 -169043230 + AT_rich Low_complexity Low_complexity 1 23 0 2243 81 0 3 chr5 30588537 30588820 -169041330 - AluSc SINE Alu -27 282 1 411 56 0 0 chr5 30590141 30590195 -169039955 + (ATG)n Simple_repeat Simple_repeat 3 56 0 243 345 79 92 chr5 30592231 30592559 -169037591 - L2 LINE L2 -17 3255 2932 313 371 123 40 chr5 30593017 30593416 -169036734 - L2 LINE L2 0 3272 2841 244 324 105 0 chr5 30593440 30593545 -169036605 - MIR SINE MIR -74 134 19 30 27 0 0 chr5 30594953 30594990 -169035160 + AT_rich Low_complexity Low_complexity 1 37 0 192 231 176 22 chr5 30597888 30597979 -169032171 + MIR SINE MIR 82 186 -76 675 101 10 0 chr5 30598502 30598601 -169031549 - L1PB3 LINE L1 -3 6151 6052 708 137 57 0 chr5 30598603 30598727 -169031423 + L1P LINE L1 5227 5357 -789 637 294 101 22 chr5 30599389 30599617 -169030533 - MIR SINE MIR -2 260 15 1032 188 65 150 chr5 30600277 30600676 -169029474 - MLT1A1 LTR MaLR 0 365 1 352 333 0 0 chr5 30600863 30600959 -169029191 - L2 LINE L2 -9 3263 3168 869 297 133 29 chr5 30601572 30601956 -169028194 - LTR16B LTR ERVL -6 458 35 472 208 28 9 chr5 30602354 30602460 -169027690 + L1 LINE L1 143 250 -5891 * 2056 163 45 17 chr5 30602446 30602886 -169027264 + L1 LINE L1 4148 4603 -1607 4662 76 14 3 chr5 30602886 30603508 -169026642 + L1PA7 LINE L1 5508 6148 -6 2056 163 45 17 chr5 30603508 30603539 -169026611 + L1 LINE L1 4603 4632 -1578 25 75 0 0 chr5 30603720 30603773 -169026377 + AT_rich Low_complexity Low_complexity 1 53 0 1280 234 120 58 chr5 30604303 30604837 -169025313 + MLT1F1 LTR MaLR 1 567 0 2062 125 0 0 chr5 30605204 30605484 -169024666 - AluSg SINE Alu -30 280 1 341 292 98 119 chr5 30605574 30606181 -169023969 - L2 LINE L2 -32 3281 2702 420 146 37 0 chr5 30606181 30606263 -169023887 + L1MB4 LINE L1 6095 6179 -1 341 292 98 119 chr5 30606263 30606535 -169023615 - L2 LINE L2 -611 2702 2426 180 111 0 0 chr5 30606597 30606624 -169023526 + (GAA)n Simple_repeat Simple_repeat 2 28 0 359 278 124 83 chr5 30607576 30607747 -169022403 - MER5A DNA MER1_type 0 189 3 181 359 72 108 chr5 30607875 30608126 -169022024 + L2 LINE L2 3024 3265 -7 2284 146 35 51 chr5 30608199 30608650 -169021500 - Tigger2 DNA MER2_type -2 2716 2273 254 179 0 0 chr5 30608640 30608679 -169021471 - Tigger2 DNA MER2_type -2649 69 31 * 441 114 0 14 chr5 30608679 30608749 -169021401 - AluS SINE Alu -244 69 1 847 147 51 6 chr5 30608753 30608909 -169021241 - MLT1A2 LTR MaLR -211 163 1 22 35 0 0 chr5 30609244 30609273 -169020877 + AT_rich Low_complexity Low_complexity 1 29 0 261 159 0 63 chr5 30609381 30609444 -169020706 - L3 LINE CR1 -606 971 913 2091 163 29 32 chr5 30611123 30611681 -169018469 - MLT2A1 LTR ERVL 0 554 1 25 31 0 0 chr5 30612228 30612260 -169017890 + AT_rich Low_complexity Low_complexity 1 32 0 185 357 0 36 chr5 30612373 30612457 -169017693 - L2 LINE L2 -4 3268 3188 636 245 104 60 chr5 30613397 30613646 -169016504 + MIR SINE MIR 3 262 0 22 0 0 0 chr5 30613785 30613807 -169016343 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr5 30615455 30615504 -169014646 + AT_rich Low_complexity Low_complexity 1 49 0 1675 199 58 62 chr5 30616094 30616561 -169013589 + MLT1C LTR MaLR 1 465 -2 2807 141 4 47 chr5 30616585 30617025 -169013125 + L1MA8 LINE L1 4817 5230 -916 1347 207 117 38 chr5 30617025 30617392 -169012758 - MSTD LTR MaLR 0 396 1 2807 141 4 47 chr5 30617392 30617505 -169012645 + L1MA8 LINE L1 5230 5346 -800 3244 159 32 21 chr5 30617509 30617866 -169012284 + L1MA8 LINE L1 5441 5809 -482 189 0 0 0 chr5 30617866 30617887 -169012263 + (TA)n Simple_repeat Simple_repeat 1 21 0 3244 159 32 21 chr5 30617887 30618147 -169012003 + L1MA8 LINE L1 5809 6065 -226 1190 79 6 6 chr5 30618548 30618713 -169011437 + L1PA13 LINE L1 5988 6152 -11 1979 152 30 41 chr5 30620738 30620925 -169009225 - MLT1B LTR MaLR 0 390 203 1268 246 21 34 chr5 30620925 30621303 -169008847 - MLT1A2 LTR MaLR -1 373 1 1979 152 30 41 chr5 30621303 30621509 -169008641 - MLT1B LTR MaLR -187 203 1 322 371 11 17 chr5 30621770 30621945 -169008205 + L1MEd LINE L1 967 1140 -4979 * 540 289 51 67 chr5 30621940 30622296 -169007854 + HAL1 LINE L1 1104 1453 -1054 701 167 10 66 chr5 30622358 30622556 -169007594 - MER53 DNA DNA -1 188 2 318 318 86 15 chr5 30622698 30622896 -169007254 + L2 LINE L2 2939 3150 -163 224 174 0 22 chr5 30622929 30622975 -169007175 + L2 LINE L2 3269 3313 0 202 309 238 18 chr5 30623048 30623443 -169006707 - L2 LINE L2 -818 2496 2015 265 161 145 0 chr5 30623586 30623648 -169006502 + MLT1H LTR MaLR 479 549 0 966 172 6 6 chr5 30623749 30623912 -169006238 + FRAM SINE Alu 1 163 -13 229 342 27 76 chr5 30624019 30624349 -169005801 - L2 LINE L2 -1639 1675 1362 952 148 51 60 chr5 30624376 30624592 -169005558 - MER20 DNA MER1_type -5 214 1 235 236 0 18 chr5 30625911 30625966 -169004184 + GA-rich Low_complexity Low_complexity 1 54 0 446 305 2 0 chr5 30626607 30626733 -169003417 + MIR SINE MIR 16 143 -65 754 274 23 50 chr5 30626975 30627141 -169003009 - MIR SINE MIR 0 262 104 1876 169 0 7 chr5 30627141 30627449 -169002701 + AluJo SINE Alu 5 310 -2 754 274 23 50 chr5 30627449 30627541 -169002609 - MIR SINE MIR -158 104 11 27 0 0 0 chr5 30630394 30630421 -168999729 + AT_rich Low_complexity Low_complexity 1 27 0 1660 169 7 21 chr5 30630931 30631221 -168998929 + AluJb SINE Alu 3 288 -24 902 133 19 6 chr5 30631868 30632026 -168998124 + L1MA2 LINE L1 6144 6303 -1 198 0 0 0 chr5 30633971 30633993 -168996157 + (A)n Simple_repeat Simple_repeat 1 22 0 2089 109 13 13 chr5 30635688 30635992 -168994158 + AluSq SINE Alu 1 304 -9 1601 155 11 0 chr5 30636619 30636883 -168993267 - AluJb SINE Alu -12 300 34 30 0 0 0 chr5 30637298 30637328 -168992822 + AT_rich Low_complexity Low_complexity 1 30 0 292 220 0 0 chr5 30637909 30637959 -168992191 + L2 LINE L2 2996 3045 -227 776 226 0 0 chr5 30638365 30638511 -168991639 - AluJb SINE Alu -19 293 148 437 333 65 65 chr5 30638928 30639727 -168990423 - L2 LINE L2 0 3272 2479 237 242 204 32 chr5 30640137 30640294 -168989856 + MLT1L LTR MaLR 374 557 -58 40416 56 3 37 chr5 30640459 30646830 -168983320 + L1PA5 LINE L1 11 6154 0 2241 59 38 17 chr5 30646872 30647161 -168982989 + AluY SINE Alu 3 297 -14 273 315 26 0 chr5 30647515 30647621 -168982529 + MIR SINE MIR 35 148 -60 2592 100 39 0 chr5 30647623 30647984 -168982166 + THE1C LTR MaLR 1 375 0 1672 194 14 0 chr5 30648056 30648345 -168981805 + AluJb SINE Alu 1 293 -19 242 219 167 10 chr5 30650592 30650688 -168979462 + LTR33A LTR ERVL 396 506 -17 748 304 32 24 chr5 30651584 30651837 -168978313 - MIR SINE MIR 0 262 8 2527 158 24 2 chr5 30651989 30652406 -168977744 + MSTB LTR MaLR 1 426 0 249 57 0 0 chr5 30652681 30652716 -168977434 + (TG)n Simple_repeat Simple_repeat 1 35 0 321 316 84 19 chr5 30654150 30654365 -168975785 + L1ME4a LINE L1 5691 5919 -202 315 246 0 0 chr5 30655427 30655496 -168974654 - MIR SINE MIR -113 149 81 30 27 0 0 chr5 30657270 30657307 -168972843 + AT_rich Low_complexity Low_complexity 1 37 0 945 130 101 18 chr5 30658847 30659016 -168971134 + AluSg/x SINE Alu 128 310 0 2423 161 105 10 chr5 30659133 30659649 -168970501 - LTR49 LTR ERV1 -30 565 1 8222 131 30 11 chr5 30659745 30661133 -168969017 - LTR49-int LTR ERV1 -47 6284 4871 2544 164 45 80 chr5 30661137 30661789 -168968361 - LTR49-int LTR ERV1 -3123 3208 2580 1721 230 58 87 chr5 30661790 30662520 -168967630 - LTR49-int LTR ERV1 -3872 2459 1670 186 43 0 0 chr5 30662535 30662558 -168967592 + (TA)n Simple_repeat Simple_repeat 1 23 0 735 166 156 29 chr5 30662581 30662786 -168967364 - LTR49 LTR ERV1 -331 264 34 1156 161 0 0 chr5 30662786 30662960 -168967190 + AluJb SINE Alu 138 311 -1 282 102 0 20 chr5 30662979 30663028 -168967122 - MER4D LTR ERV1 -572 331 284 823 288 9 0 chr5 30663163 30663389 -168966761 - MIR SINE MIR -29 233 6 2398 92 0 0 chr5 30663991 30664295 -168965855 - AluSg SINE Alu -4 306 3 463 350 17 6 chr5 30664434 30664614 -168965536 + MIR SINE MIR 13 194 -68 23 54 0 0 chr5 30666735 30666772 -168963378 + AT_rich Low_complexity Low_complexity 1 37 0 275 286 71 43 chr5 30667655 30667795 -168962355 + MIR SINE MIR 119 262 0 200 311 26 100 chr5 30667929 30668119 -168962031 - L2 LINE L2 -1 3312 3137 2119 123 0 19 chr5 30668255 30668564 -168961586 - AluSc SINE Alu -6 303 1 194 272 12 49 chr5 30668851 30668932 -168961218 + L2 LINE L2 2900 2977 -336 2317 94 0 31 chr5 30669254 30669572 -168960578 - AluSg1 SINE Alu -1 308 1 484 158 10 10 chr5 30671120 30671221 -168958929 + (TA)n Simple_repeat Simple_repeat 2 102 0 820 204 17 69 chr5 30671683 30671914 -168958236 - MER20 DNA MER1_type 0 219 1 697 261 46 50 chr5 30672342 30672580 -168957570 + MIR SINE MIR 2 238 -24 21 0 0 0 chr5 30672964 30672985 -168957165 + AT_rich Low_complexity Low_complexity 1 21 0 183 411 9 0 chr5 30673606 30673713 -168956437 - MIR SINE MIR -108 154 47 351 130 14 14 chr5 30674633 30674702 -168955448 + MIR SINE MIR 130 198 -64 285 29 0 0 chr5 30674909 30674943 -168955207 + (A)n Simple_repeat Simple_repeat 1 34 0 223 345 131 10 chr5 30675917 30676123 -168954027 + MIR SINE MIR 32 262 0 180 314 100 29 chr5 30677421 30677561 -168952589 + L2 LINE L2 2734 2883 -431 2590 137 24 12 chr5 30677897 30678320 -168951830 - MSTA LTR MaLR 0 428 1 3988 64 28 4 chr5 30679905 30680437 -168949713 - L1PA8 LINE L1 -1 6171 5627 25 0 0 0 chr5 30680925 30680950 -168949200 + AT_rich Low_complexity Low_complexity 1 25 0 538 266 47 12 chr5 30681642 30681811 -168948339 - MER5B DNA MER1_type -3 175 1 1681 139 14 185 chr5 30682014 30682576 -168947574 + MER31B LTR ERV1 1 466 0 865 83 0 45 chr5 30684184 30684317 -168945833 + MLT1B LTR MaLR 1 127 -263 426 69 46 11 chr5 30684321 30684408 -168945742 + (TTATA)n Simple_repeat Simple_repeat 3 92 0 2587 90 0 59 chr5 30684420 30684807 -168945343 + THE1B LTR MaLR 1 364 0 1067 141 120 34 chr5 30684812 30685046 -168945104 + MLT1B LTR MaLR 135 388 -2 25 0 0 0 chr5 30685256 30685281 -168944869 + AT_rich Low_complexity Low_complexity 1 25 0 389 287 67 13 chr5 30686245 30686395 -168943755 + MIR SINE MIR 104 261 -1 339 164 0 0 chr5 30686976 30687031 -168943119 - MLT1A2 LTR MaLR 0 374 320 * 609 232 32 26 chr5 30687026 30687181 -168942969 - MLT1A2 LTR MaLR -218 156 1 368 135 0 0 chr5 30688002 30688054 -168942096 - MER45C DNA AcHobo -2 951 900 346 328 80 0 chr5 30688050 30688175 -168941975 - MER45C DNA AcHobo -320 633 499 * 534 153 15 124 chr5 30688352 30688459 -168941691 - MER45C DNA AcHobo -762 191 101 1772 97 68 84 chr5 30688459 30688770 -168941380 + AluSx SINE Alu 1 306 -6 534 153 15 124 chr5 30688770 30688799 -168941351 - MER45C DNA AcHobo -852 101 70 1205 131 6 0 chr5 30689169 30689345 -168940805 - AluSq SINE Alu -8 305 129 368 342 81 35 chr5 30689534 30689844 -168940306 - HAL1 LINE L1 -917 1590 1267 2573 136 28 16 chr5 30690865 30691292 -168938858 + MSTB1 LTR MaLR 1 432 0 1844 124 25 3 chr5 30692170 30692453 -168937697 + AluSc SINE Alu 12 300 -9 212 314 32 85 chr5 30692797 30692957 -168937193 - MIR3 SINE MIR -54 154 2 2349 38 42 7 chr5 30693508 30693795 -168936355 + AluY SINE Alu 1 297 -14 24 32 0 0 chr5 30694873 30694904 -168935246 + AT_rich Low_complexity Low_complexity 1 31 0 438 291 40 27 chr5 30695497 30695645 -168934505 - MIR SINE MIR 0 262 113 295 317 14 82 chr5 30695865 30696073 -168934077 - L2 LINE L2 -523 2791 2598 703 314 108 26 chr5 30696095 30696293 -168933857 + MLT1G1 LTR MaLR 1 181 -414 1637 157 14 14 chr5 30696293 30696579 -168933571 - AluJb SINE Alu -26 286 1 703 314 108 26 chr5 30696579 30696833 -168933317 + MLT1G1 LTR MaLR 181 490 -105 234 271 0 0 chr5 30696834 30696893 -168933257 + MLT1G1 LTR MaLR 445 503 -2 28 71 0 0 chr5 30697038 30697094 -168933056 + AT_rich Low_complexity Low_complexity 1 56 0 1967 104 0 18 chr5 30697618 30697896 -168932254 + AluSg SINE Alu 27 299 -11 1335 215 47 64 chr5 30698213 30698622 -168931528 - MER39 LTR ERV1 0 707 306 2576 65 0 3 chr5 30699084 30699393 -168930757 - AluY SINE Alu -2 309 2 181 179 18 18 chr5 30699818 30699874 -168930276 + (TA)n Simple_repeat Simple_repeat 1 56 0 1731 179 65 60 chr5 30700588 30700656 -168929494 - MLT1C LTR MaLR 0 467 401 4416 110 14 50 chr5 30700656 30701373 -168928777 + LTR8 LTR ERV1 1 691 0 1731 179 65 60 chr5 30701373 30701767 -168928383 - MLT1C LTR MaLR -66 401 3 1511 227 172 10 chr5 30701779 30702272 -168927878 + L1MC3 LINE L1 7213 7785 0 184 176 137 39 chr5 30703432 30703483 -168926667 + L2 LINE L2 3187 3242 -30 2247 205 70 37 chr5 30706847 30707365 -168922785 + MER34 LTR ERV1 1 535 -7 28 48 0 0 chr5 30707516 30707558 -168922592 + AT_rich Low_complexity Low_complexity 1 42 0 808 229 124 25 chr5 30707620 30707648 -168922502 - MER5C DNA MER1_type 0 324 300 2471 115 22 0 chr5 30707648 30708004 -168922146 + THE1B LTR MaLR 1 364 0 808 229 124 25 chr5 30708004 30708250 -168921900 - MER5C DNA MER1_type -24 300 23 265 222 14 28 chr5 30708484 30708556 -168921594 + MER69 DNA AcHobo 1 71 -1155 360 252 87 0 chr5 30708697 30708824 -168921326 + MER69 DNA AcHobo 2382 2519 -7 1420 148 93 21 chr5 30709024 30709097 -168921053 - MER44D DNA MER2_type -1882 609 543 2391 165 19 14 chr5 30709097 30709527 -168920623 + MSTB1 LTR MaLR 1 432 0 1420 148 93 21 chr5 30709527 30709743 -168920407 - MER44D DNA MER2_type -1948 543 29 391 247 41 34 chr5 30709873 30710019 -168920131 - MER112 DNA MER1_type -78 182 36 4506 192 22 9 chr5 30710637 30713577 -168916573 - L1PB1 LINE L1 -38 6829 3692 10015 122 116 15 chr5 30713678 30715407 -168914743 - L1PB1 LINE L1 -4327 2536 634 1161 148 10 0 chr5 30715407 30715603 -168914547 - L1PB1 LINE L1 -6663 200 3 242 369 43 14 chr5 30715752 30715893 -168914257 + L2 LINE L2 2602 2746 -568 339 357 54 16 chr5 30716399 30716528 -168913622 - L2 LINE L2 0 3272 3139 1058 226 18 0 chr5 30716546 30716767 -168913383 - MIR SINE MIR -4 258 34 566 209 101 0 chr5 30716940 30717049 -168913101 - MIR SINE MIR -44 218 91 2204 105 55 19 chr5 30717049 30717411 -168912739 + THE1C LTR MaLR 1 375 0 566 209 101 0 chr5 30717411 30717440 -168912710 - MIR SINE MIR -171 91 66 181 328 108 20 chr5 30717635 30717830 -168912320 - L2 LINE L2 -481 2833 2622 323 273 142 50 chr5 30718495 30718755 -168911395 - MLT1J LTR MaLR -12 499 216 2569 50 0 0 chr5 30720882 30721184 -168908966 - AluY SINE Alu -9 302 1 194 200 169 62 chr5 30722339 30722404 -168907746 + L2 LINE L2 3207 3278 -35 362 370 59 25 chr5 30722560 30722914 -168907236 - L2 LINE L2 -411 2903 2538 681 346 67 20 chr5 30722969 30723359 -168906791 - L2 LINE L2 -84 3229 2822 815 339 97 42 chr5 30723380 30724099 -168906051 - L2 LINE L2 -926 2388 1630 22 0 0 0 chr5 30724234 30724256 -168905894 + AT_rich Low_complexity Low_complexity 1 22 0 231 114 0 0 chr5 30724321 30724356 -168905794 + (TA)n Simple_repeat Simple_repeat 1 35 0 193 283 57 0 chr5 30724996 30725049 -168905101 - L2 LINE L2 -1 3312 3257 2236 155 101 8 chr5 30725557 30725743 -168904407 + L1P4 LINE L1 5303 5470 -692 2377 55 3 19 chr5 30725743 30726053 -168904097 + AluY SINE Alu 1 305 -6 2236 155 101 8 chr5 30726053 30726211 -168903939 + L1P4 LINE L1 5470 5612 -550 1980 130 0 36 chr5 30726211 30726512 -168903638 - AluSx SINE Alu -22 290 1 2236 155 101 8 chr5 30726512 30726658 -168903492 + L1P4 LINE L1 5612 5838 -324 288 241 23 11 chr5 30726658 30726745 -168903405 + (TA)n Simple_repeat Simple_repeat 2 89 0 239 217 22 44 chr5 30726770 30726950 -168903200 + (CATATA)n Simple_repeat Simple_repeat 1 176 0 * 245 98 24 0 chr5 30726910 30726951 -168903199 + (CA)n Simple_repeat Simple_repeat 2 43 0 478 161 19 37 chr5 30727003 30727164 -168902986 + (CATA)n Simple_repeat Simple_repeat 2 159 0 1984 153 35 11 chr5 30727168 30727534 -168902616 + L1PB4 LINE L1 5782 6156 0 9635 178 7 12 chr5 30728071 30728359 -168901791 + L1PA7 LINE L1 3228 3516 -2635 9244 92 16 0 chr5 30728359 30730422 -168899728 + L1PA7 LINE L1 4077 6154 0 9635 178 7 12 chr5 30730422 30732712 -168897438 + L1PA7 LINE L1 3516 5791 -360 315 268 21 31 chr5 30732755 30732852 -168897298 - L1MC4 LINE L1 -1333 6709 6614 2327 107 3 22 chr5 30732871 30733236 -168896914 + L1PB1 LINE L1 5777 6134 -17 569 137 81 32 chr5 30733462 30733586 -168896564 - MER53 DNA DNA -58 131 2 26 0 0 0 chr5 30734381 30734407 -168895743 + AT_rich Low_complexity Low_complexity 1 26 0 1975 181 62 2 chr5 30735900 30736336 -168893814 - L1PA16 LINE L1 -9 6157 5661 22 0 0 0 chr5 30736760 30736782 -168893368 + AT_rich Low_complexity Low_complexity 1 22 0 452 308 81 13 chr5 30738465 30738699 -168891451 - L3 LINE CR1 -2 1575 1326 230 269 19 0 chr5 30738706 30738758 -168891392 - L3 LINE CR1 -902 675 623 183 359 160 0 chr5 30738937 30739043 -168891107 - L3 LINE CR1 -1217 360 238 220 348 148 17 chr5 30739368 30739658 -168890492 + L2 LINE L2 1990 2317 -997 299 328 40 8 chr5 30739814 30739939 -168890211 + L2 LINE L2 3180 3308 -5 188 182 23 0 chr5 30744815 30744859 -168885291 + (TA)n Simple_repeat Simple_repeat 1 45 0 1677 172 50 0 chr5 30744972 30745251 -168884899 + AluJb SINE Alu 1 293 -19 2462 132 31 24 chr5 30745511 30745936 -168884214 - MSTA LTR MaLR 0 428 1 1778 146 63 33 chr5 30747142 30747506 -168882644 - THE1C LTR MaLR 0 375 1 198 288 30 15 chr5 30747641 30747707 -168882443 - L3 LINE CR1 -322 1255 1189 1683 231 49 22 chr5 30747727 30748177 -168881973 + LTR40b LTR ERVL 1 462 0 2158 163 72 15 chr5 30748514 30748918 -168881232 + MSTA LTR MaLR 2 428 0 207 100 0 0 chr5 30749439 30749469 -168880681 + (T)n Simple_repeat Simple_repeat 1 30 0 186 43 0 0 chr5 30750598 30750621 -168879529 + (TG)n Simple_repeat Simple_repeat 2 24 0 323 310 35 9 chr5 30750933 30751046 -168879104 + L2 LINE L2 3197 3312 -1 268 327 118 7 chr5 30752057 30752210 -168877940 - L3 LINE CR1 -3 1574 1405 202 303 55 46 chr5 30752291 30752400 -168877750 - MIR SINE MIR -52 210 101 1899 209 105 66 chr5 30756140 30756656 -168873494 - MLT1E LTR MaLR 0 593 58 195 238 0 0 chr5 30757870 30757912 -168872238 - L2 LINE L2 -3 3310 3269 214 330 43 43 chr5 30758955 30759049 -168871101 - L2 LINE L2 -1 3271 3178 227 360 67 13 chr5 30759056 30759206 -168870944 + L2 LINE L2 3154 3311 -2 246 271 29 0 chr5 30761542 30761612 -168868538 - MLT1K LTR MaLR -1 587 516 2110 139 0 0 chr5 30761618 30761921 -168868229 + AluSx SINE Alu 1 303 -9 514 184 0 0 chr5 30863258 30863356 -168766794 - Tigger1 DNA MER2_type -755 1663 1566 3914 153 19 88 chr5 30863356 30864733 -168765417 - pTR5 LTR ERV1 0 2606 1524 593 231 8 0 chr5 30864873 30864994 -168765156 - FLAM_A SINE Alu -11 122 1 866 203 68 4 chr5 30865052 30865289 -168764861 - HAL1 LINE L1 -726 1781 1530 1559 168 62 0 chr5 30865292 30865566 -168764584 - AluJb SINE Alu -21 291 1 382 267 144 7 chr5 30865628 30865774 -168764376 + L2 LINE L2 2481 2646 -668 1299 168 5 0 chr5 30865857 30866066 -168764084 + AluSx SINE Alu 2 211 -101 9394 96 12 13 chr5 30866169 30867626 -168762524 - L1P LINE L1 -763 5383 3928 300 250 13 13 chr5 30867851 30867927 -168762223 - MER81 DNA DNA 0 114 39 31 0 0 0 chr5 30869215 30869246 -168760904 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr5 30869552 30869576 -168760574 + AT_rich Low_complexity Low_complexity 1 24 0 307 280 89 36 chr5 30870330 30870498 -168759652 + MARNA DNA Mariner 229 405 -181 22 0 0 0 chr5 30870776 30870798 -168759352 + AT_rich Low_complexity Low_complexity 1 22 0 2379 158 54 2 chr5 30870879 30871284 -168758866 - MSTB LTR MaLR 0 426 1 229 268 127 0 chr5 30871657 30871728 -168758422 + MIR SINE MIR 19 98 -164 858 198 11 50 chr5 30877432 30877614 -168752536 - FAM SINE Alu 0 175 1 231 188 100 12 chr5 30877622 30877702 -168752448 - L1MC5 LINE L1 -34 7927 7841 1434 196 103 41 chr5 30877715 30878041 -168752109 - L1MC5 LINE L1 -310 7651 7276 813 212 88 5 chr5 30878041 30878234 -168751916 - MER3 DNA MER1_type 0 209 1 1434 196 103 41 chr5 30878234 30878448 -168751702 - L1MC5 LINE L1 -685 7276 7077 352 145 0 105 chr5 30878586 30878662 -168751488 - Tigger5 DNA MER2_type 0 2323 2256 243 250 18 0 chr5 30878674 30878730 -168751420 + Tigger5 DNA MER2_type 2264 2320 -3 * 405 215 0 0 chr5 30878730 30878808 -168751342 - Tigger5 DNA MER2_type -2245 78 1 1835 160 0 11 chr5 30878967 30879254 -168750896 - AluJo SINE Alu -28 284 1 2276 88 10 3 chr5 30879444 30879740 -168750410 + AluSx SINE Alu 8 305 -7 234 228 59 30 chr5 30879764 30879865 -168750285 - L1MC5 LINE L1 -1844 5964 5861 320 250 0 0 chr5 30879867 30879931 -168750219 + AluJ/FLAM SINE Alu 1 64 -238 1079 170 0 0 chr5 30879931 30880096 -168750054 + AluJo/FRAM SINE Alu 130 294 -18 390 21 0 0 chr5 30880355 30880402 -168749748 + (TG)n Simple_repeat Simple_repeat 2 48 0 612 299 51 49 chr5 30880695 30880924 -168749226 - HAL1b LINE L1 -706 642 415 2079 139 0 3 chr5 30880924 30881225 -168748925 + AluJb SINE Alu 1 300 -12 612 299 51 49 chr5 30881225 30881543 -168748607 - HAL1b LINE L1 -933 415 94 2463 73 0 0 chr5 30881905 30882206 -168747944 - AluY SINE Alu -10 301 1 21 0 0 0 chr5 30882918 30882939 -168747211 + AT_rich Low_complexity Low_complexity 1 21 0 224 313 197 50 chr5 30883147 30883357 -168746793 + L3 LINE CR1 1120 1388 -189 1849 151 0 27 chr5 30883357 30883656 -168746494 + AluJb SINE Alu 1 291 -21 224 313 197 50 chr5 30883656 30883745 -168746405 + L3 LINE CR1 1388 1463 -114 221 384 30 0 chr5 30884719 30884818 -168745332 - MIR3 SINE MIR -50 158 57 911 226 28 19 chr5 30884840 30885052 -168745098 - MIR SINE MIR -37 225 12 2332 93 0 0 chr5 30885641 30885941 -168744209 - AluSq SINE Alu -13 300 1 5495 105 14 27 chr5 30886032 30887000 -168743150 - L1PB3 LINE L1 -4 6150 5194 1811 140 59 0 chr5 30887111 30887397 -168742753 - AluJo SINE Alu -7 305 3 2117 141 0 7 chr5 30887711 30888010 -168742140 - AluSx SINE Alu -15 297 1 4401 177 25 16 chr5 30888322 30889339 -168740811 - L1MB8 LINE L1 -1 6177 5144 608 219 0 0 chr5 30889337 30889474 -168740676 - L1MB8 LINE L1 -1461 4685 4549 * 2204 89 94 19 chr5 30889495 30889808 -168740342 - L1PA13 LINE L1 -39 6124 5780 2025 140 0 0 chr5 30889808 30890101 -168740049 - AluSx SINE Alu -19 293 1 2204 89 94 19 chr5 30890101 30890160 -168739990 - L1PA13 LINE L1 -383 5780 5727 276 55 0 73 chr5 30890164 30890219 -168739931 - FAM SINE Alu -1 178 128 3028 228 53 12 chr5 30890219 30890393 -168739757 - L1MB8 LINE L1 -1589 4557 4392 2588 61 0 3 chr5 30890393 30890704 -168739446 - AluY SINE Alu -1 310 1 3028 228 53 12 chr5 30890704 30891432 -168738718 - L1MB8 LINE L1 -1754 4392 3618 271 384 56 0 chr5 30892879 30893004 -168737146 + L2 LINE L2 3141 3272 0 1963 102 80 0 chr5 30893546 30893821 -168736329 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr5 30893915 30893936 -168736214 + AT_rich Low_complexity Low_complexity 1 21 0 193 286 114 0 chr5 30894066 30894136 -168736014 + L3 LINE CR1 1496 1573 -4 1636 164 39 4 chr5 30895444 30895725 -168734425 - AluJo SINE Alu -21 291 1 1178 125 91 159 chr5 30895839 30896223 -168733927 - MER46B DNA MER2_type -3 233 1 2171 207 62 20 chr5 30897142 30897305 -168732845 - MER44D DNA MER2_type -1913 574 419 545 118 11 0 chr5 30897305 30897398 -168732752 + L1PA15 LINE L1 6072 6165 0 2171 207 62 20 chr5 30897398 30897732 -168732418 - MER44D DNA MER2_type -2068 419 1 1589 281 82 48 chr5 30897771 30898639 -168731511 + L2 LINE L2 1841 2737 -577 197 284 28 83 chr5 30898860 30898969 -168731181 - L2 LINE L2 -213 3059 2957 468 0 0 0 chr5 30900067 30900119 -168730031 + (TG)n Simple_repeat Simple_repeat 2 53 0 2255 118 0 0 chr5 30900169 30900466 -168729684 + AluSx SINE Alu 2 298 -14 418 270 13 113 chr5 30901720 30901950 -168728200 + MIR SINE MIR 53 259 -3 2225 79 0 30 chr5 30903006 30903311 -168726839 + AluY SINE Alu 3 298 -13 2316 104 0 0 chr5 30904425 30904723 -168725427 + AluSx SINE Alu 1 298 -14 207 0 0 0 chr5 30905468 30905491 -168724659 + (T)n Simple_repeat Simple_repeat 1 23 0 489 298 6 32 chr5 30906217 30906375 -168723775 + MIR SINE MIR 31 184 -78 700 167 25 8 chr5 30906387 30906507 -168723643 + MER90 LTR ERV1 352 473 -102 239 294 44 0 chr5 30908748 30908816 -168721334 + L2 LINE L2 3201 3271 -1 386 127 16 0 chr5 30909079 30909142 -168721008 - LTR65 LTR ERV1 -6 663 600 623 224 8 0 chr5 30909317 30909451 -168720699 - LTR65 LTR ERV1 -534 135 1 181 324 208 43 chr5 30909661 30910103 -168720047 + L2 LINE L2 2243 2757 -557 183 262 33 16 chr5 30910295 30910356 -168719794 + L2 LINE L2 3008 3069 -203 235 309 119 0 chr5 30910514 30910598 -168719552 - MIR SINE MIR -121 141 48 304 299 170 26 chr5 30910898 30911092 -168719058 - MIR SINE MIR -21 241 20 24 0 0 0 chr5 30911501 30911525 -168718625 + AT_rich Low_complexity Low_complexity 1 24 0 220 242 0 16 chr5 30913054 30913116 -168717034 + (TA)n Simple_repeat Simple_repeat 1 61 0 21 0 0 0 chr5 30913187 30913208 -168716942 + AT_rich Low_complexity Low_complexity 1 21 0 636 235 129 18 chr5 30913411 30913581 -168716569 + MER5A DNA MER1_type 1 189 0 917 244 10 0 chr5 30914316 30914509 -168715641 - MER58A DNA MER1_type -11 213 19 1609 118 6 156 chr5 30914738 30915103 -168715047 - AluJb SINE Alu -2 310 1 248 277 31 75 chr5 30915775 30915934 -168714216 - L2 LINE L2 -18 3295 3144 224 299 146 29 chr5 30917286 30917423 -168712727 - MIR3 SINE MIR -55 153 1 885 325 115 21 chr5 30917645 30918255 -168711895 + L2 LINE L2 1955 2621 -693 1550 169 69 4 chr5 30918288 30918548 -168711602 + AluJo SINE Alu 1 277 -35 423 78 0 0 chr5 30918549 30918613 -168711537 + (TC)n Simple_repeat Simple_repeat 2 65 0 248 0 31 0 chr5 30918616 30918648 -168711502 + (CA)n Simple_repeat Simple_repeat 2 34 0 234 356 0 11 chr5 30918941 30919028 -168711122 + L2 LINE L2 2622 2707 -607 632 256 82 0 chr5 30919071 30919266 -168710884 + L2 LINE L2 2057 2267 -1047 258 51 0 0 chr5 30919269 30919308 -168710842 - L1P LINE L1 -854 5300 5262 1081 283 123 11 chr5 30919308 30919985 -168710165 + L2 LINE L2 2559 3311 -2 548 269 146 61 chr5 30920056 30920480 -168709670 + L2 LINE L2 2809 3268 -4 21 0 0 0 chr5 30920603 30920624 -168709526 + AT_rich Low_complexity Low_complexity 1 21 0 290 302 179 40 chr5 30921275 30921527 -168708623 - L3b LINE CR1 -28 1555 1269 816 276 39 4 chr5 30922186 30922418 -168707732 - MIR SINE MIR -3 259 20 269 289 44 22 chr5 30922947 30923037 -168707113 - MER5B DNA MER1_type -72 106 15 183 336 44 58 chr5 30923062 30923288 -168706862 + L2 LINE L2 3019 3241 -31 2077 127 0 7 chr5 30924930 30925222 -168704928 + AluJb SINE Alu 1 290 -22 37 23 0 0 chr5 30925268 30925312 -168704838 + AT_rich Low_complexity Low_complexity 1 44 0 405 234 19 0 chr5 30925483 30925610 -168704540 + L1ME1 LINE L1 6036 6181 -3 1468 178 73 14 chr5 30930347 30930633 -168699517 - AluSx SINE Alu -9 303 1 222 37 0 0 chr5 30931066 30931093 -168699057 + (A)n Simple_repeat Simple_repeat 1 27 0 2248 99 0 25 chr5 30931458 30931772 -168698378 - AluSq SINE Alu -7 306 1 366 299 57 13 chr5 30931885 30932042 -168698108 - L1MC4a LINE L1 -1904 5904 5741 323 178 99 40 chr5 30932627 30932728 -168697422 + L1ME4a LINE L1 5512 5618 -503 967 144 0 0 chr5 30932758 30932897 -168697253 + AluJo SINE Alu 120 258 -54 382 252 94 6 chr5 30932951 30933023 -168697127 + L1ME4a LINE L1 5712 5776 -345 875 232 34 73 chr5 30933023 30933256 -168696894 - MER58A DNA MER1_type 0 224 1 382 252 94 6 chr5 30933256 30933342 -168696808 + L1ME4a LINE L1 5776 5884 -237 231 143 0 0 chr5 30933429 30933471 -168696679 - LTR66 LTR ERVL -172 438 397 1611 106 68 0 chr5 30933785 30934022 -168696128 + AluSg SINE Alu 1 253 -57 239 0 32 0 chr5 30934035 30934066 -168696084 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1259 172 60 84 chr5 30934224 30934556 -168695594 - MER44D DNA MER2_type -6 603 10 38 0 0 0 chr5 30935245 30935283 -168694867 + AT_rich Low_complexity Low_complexity 1 38 0 604 280 213 21 chr5 30936368 30936654 -168693496 - L2 LINE L2 -1 3312 2972 21 0 0 0 chr5 30936660 30936681 -168693469 + AT_rich Low_complexity Low_complexity 1 21 0 2255 98 3 7 chr5 30936710 30937016 -168693134 + AluSx SINE Alu 1 305 -7 348 64 0 0 chr5 30937433 30937480 -168692670 + (CA)n Simple_repeat Simple_repeat 2 48 0 1763 108 0 0 chr5 30937624 30937856 -168692294 - AluSg/x SINE Alu -5 307 76 2129 96 72 86 chr5 30937859 30938261 -168691889 + LTR14B LTR ERVK 3 608 0 5566 54 65 9 chr5 30938261 30939005 -168691145 + HERVK14 LTR ERVK 1 785 -5160 8960 66 25 15 chr5 30939041 30939381 -168690769 + HERV17 LTR ERV1 824 1159 -7467 198 0 0 0 chr5 30939381 30939403 -168690747 + (TA)n Simple_repeat Simple_repeat 1 22 0 8960 66 25 15 chr5 30939403 30940244 -168689906 + HERV17 LTR ERV1 1159 2016 -6610 * 11158 43 5 3 chr5 30940227 30941549 -168688601 + HERV17 LTR ERV1 2430 3754 -4872 1282 20 7 0 chr5 30941528 30941676 -168688474 + HERV17 LTR ERV1 5405 5553 -3073 * 367 41 0 0 chr5 30941675 30941724 -168688426 + HERV17 LTR ERV1 433 481 -8145 * 3519 55 11 16 chr5 30941724 30942380 -168687770 + HERVK14 LTR ERVK 5038 5759 -186 278 249 0 18 chr5 30942380 30942455 -168687695 + MER41C LTR ERV1 1 61 -493 830 19 76 19 chr5 30942455 30942560 -168687590 + HERVK14 LTR ERVK 5835 5945 0 263 85 21 43 chr5 30942563 30942610 -168687540 + LTR14B LTR ERVK 1 46 -562 * 2116 115 85 24 chr5 30942598 30942973 -168687177 + LTR14B LTR ERVK 211 608 0 557 111 0 0 chr5 30942973 30943054 -168687096 - AluJ/FLAM SINE Alu -230 82 2 304 358 118 28 chr5 30943893 30943934 -168686216 - L2 LINE L2 -652 2662 2626 1518 171 112 41 chr5 30943934 30944274 -168685876 - MLT1A1 LTR MaLR -1 364 1 304 358 118 28 chr5 30944274 30944400 -168685750 - L2 LINE L2 -688 2626 2513 1225 201 9 14 chr5 30944400 30944619 -168685531 - MER20 DNA MER1_type 0 219 2 304 358 118 28 chr5 30944619 30944702 -168685448 - L2 LINE L2 -801 2513 2439 2091 111 7 3 chr5 30944702 30944990 -168685160 + AluSq SINE Alu 1 289 -24 304 358 118 28 chr5 30944990 30945128 -168685022 - L2 LINE L2 -875 2439 2237 2321 86 20 0 chr5 30945629 30945933 -168684217 + AluSp SINE Alu 1 310 -3 441 229 153 93 chr5 30946007 30946373 -168683777 + MLT1J1 LTR MaLR 58 445 -1 1279 135 0 30 chr5 30946459 30946659 -168683491 + MSTA LTR MaLR 233 426 -2 8385 147 20 120 chr5 30946659 30947225 -168682925 + MSTA-int LTR MaLR 3 624 -1027 2158 104 7 0 chr5 30947225 30947638 -168682512 - AluSq SINE Alu 0 415 1 8385 147 20 120 chr5 30947638 30948896 -168681254 + MSTA-int LTR MaLR 624 1645 -6 2138 142 67 24 chr5 30948908 30948972 -168681178 + MSTA LTR MaLR 39 99 -329 2487 157 52 0 chr5 30948972 30949379 -168680771 + MSTA LTR MaLR 1 428 0 2138 142 67 24 chr5 30949379 30949688 -168680462 + MSTA LTR MaLR 99 428 0 24 0 0 0 chr5 30950102 30950126 -168680024 + AT_rich Low_complexity Low_complexity 1 24 0 2251 95 6 22 chr5 30950191 30950508 -168679642 + AluSp SINE Alu 1 312 -1 401 178 84 63 chr5 30950833 30951024 -168679126 - L1MC5 LINE L1 -409 7552 7358 260 59 0 0 chr5 30951163 30951197 -168678953 + MLT2C1 LTR ERVL 1 34 -363 402 117 0 0 chr5 30951200 30951260 -168678890 + MLT1E1 LTR MaLR 595 654 0 1655 127 0 4 chr5 30951289 30951525 -168678625 + AluJb SINE Alu 52 286 -26 1850 163 0 22 chr5 30951611 30951939 -168678211 + AluJo SINE Alu 1 321 0 2048 150 0 0 chr5 30952050 30952350 -168677800 - AluJb SINE Alu -12 300 1 330 371 56 35 chr5 30952419 30952705 -168677445 + L2 LINE L2 2976 3267 -5 2337 90 0 3 chr5 30955825 30956126 -168674024 - AluY SINE Alu -11 300 1 600 145 60 0 chr5 30956129 30956246 -168673904 - MER58 DNA MER1_type -34 2386 2263 * 851 208 48 0 chr5 30956240 30956408 -168673742 - MER58 DNA MER1_type -2244 176 1 207 0 0 0 chr5 30956823 30956846 -168673304 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 457 301 119 9 chr5 30957569 30957795 -168672355 + MIR SINE MIR 12 262 0 460 243 118 28 chr5 30958516 30958660 -168671490 - MIR SINE MIR -98 164 8 575 165 220 28 chr5 30959703 30959812 -168670338 - FLAM_C SINE Alu -3 130 1 2405 82 0 13 chr5 30961114 30961429 -168668721 + AluY SINE Alu 1 311 0 2322 119 0 0 chr5 30961837 30962149 -168668001 + AluSx SINE Alu 1 312 0 273 304 51 0 chr5 30962475 30962554 -168667596 + MIR SINE MIR 38 120 -142 1178 84 13 0 chr5 30964785 30964940 -168665210 - L1PA8 LINE L1 -3 6169 6013 192 329 57 0 chr5 30965500 30965570 -168664580 - L2 LINE L2 -10 3303 3230 2040 127 10 0 chr5 30966106 30966398 -168663752 - AluSq SINE Alu -18 295 1 231 320 10 10 chr5 30966558 30966658 -168663492 - LTR16B LTR ERVL -27 437 338 455 289 48 18 chr5 30966677 30966843 -168663307 - LTR16B LTR ERVL -229 235 65 226 329 42 48 chr5 30967153 30967442 -168662708 - L2 LINE L2 -1096 2218 1932 1727 164 27 20 chr5 30968204 30968497 -168661653 - AluJb SINE Alu -17 295 1 1247 95 0 4 chr5 30972378 30972827 -168657323 + (CCAA)n Simple_repeat Simple_repeat 1 446 0 1176 97 30 0 chr5 30973207 30973372 -168656778 + MER41B LTR ERV1 464 633 -2 552 286 93 62 chr5 30973646 30974002 -168656148 + MLT1J LTR MaLR 206 493 -18 4482 125 6 6 chr5 30974561 30975194 -168654956 + MER41B LTR ERV1 1 633 -2 329 277 95 52 chr5 30975972 30976297 -168653853 + HAL1 LINE L1 2169 2507 0 339 25 0 0 chr5 30976697 30976737 -168653413 + (CA)n Simple_repeat Simple_repeat 2 41 0 2074 134 13 0 chr5 30977850 30978155 -168651995 + AluSx SINE Alu 3 311 -1 343 169 0 24 chr5 30978155 30978238 -168651912 + GA-rich Low_complexity Low_complexity 1 81 0 1797 197 153 22 chr5 30978943 30979389 -168650761 + MLT1D LTR MaLR 2 505 0 2292 143 0 15 chr5 30979498 30979840 -168650310 + MER1B DNA MER1_type 1 337 0 1494 227 71 17 chr5 30980130 30980483 -168649667 + MLT1A2 LTR MaLR 3 374 0 2826 185 25 70 chr5 30980667 30980939 -168649211 + MLT1E3 LTR MaLR 1 284 -340 1313 211 21 18 chr5 30980939 30981219 -168648931 + AluJo SINE Alu 1 281 -31 222 37 0 0 chr5 30981223 30981250 -168648900 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2826 185 25 70 chr5 30981250 30981626 -168648524 + MLT1E3 LTR MaLR 287 624 0 398 313 88 32 chr5 30982377 30982751 -168647399 - MLT1L LTR MaLR -33 582 188 278 309 78 54 chr5 30983292 30983496 -168646654 - L2 LINE L2 -557 2757 2549 181 229 83 64 chr5 30984727 30984836 -168645314 - L2 LINE L2 -911 2403 2293 2052 168 33 41 chr5 30985259 30985481 -168644669 - MLT1B LTR MaLR -1 389 170 2436 81 10 0 chr5 30985481 30985789 -168644361 - AluSp SINE Alu -2 311 1 2052 168 33 41 chr5 30985789 30985958 -168644192 - MLT1B LTR MaLR -220 170 1 1809 184 7 0 chr5 30986412 30986722 -168643428 - AluJo SINE Alu 0 312 1 2202 138 0 0 chr5 30986728 30987032 -168643118 - AluSx SINE Alu -8 304 1 524 293 66 0 chr5 30988078 30988245 -168641905 + MIR SINE MIR 20 197 -65 244 138 35 17 chr5 30988500 30988558 -168641592 + (TA)n Simple_repeat Simple_repeat 1 59 0 605 226 0 15 chr5 30989314 30989451 -168640699 - MIR SINE MIR 0 262 128 1338 148 229 4 chr5 30989843 30990087 -168640063 + AluSq SINE Alu 1 299 -4 327 276 0 0 chr5 30990453 30990529 -168639621 + L2 LINE L2 3238 3313 0 1160 262 53 42 chr5 30990538 30990970 -168639180 + HAL1b LINE L1 367 803 -545 778 310 130 46 chr5 30991915 30992889 -168637261 - L2 LINE L2 -1 3271 2222 2033 208 80 4 chr5 30993783 30994235 -168635915 + MLT1E2 LTR MaLR 141 626 0 1927 162 0 3 chr5 30996110 30996407 -168633743 + AluJb SINE Alu 1 296 -16 27 0 0 0 chr5 30996585 30996612 -168633538 + AT_rich Low_complexity Low_complexity 1 27 0 710 136 0 0 chr5 30997398 30997501 -168632649 - FLAM_C SINE Alu -32 111 9 2252 117 10 0 chr5 30997517 30997826 -168632324 - AluSx SINE Alu 0 312 1 196 225 0 0 chr5 30998448 30998488 -168631662 - L2 LINE L2 0 3313 3274 27 0 0 0 chr5 30998720 30998747 -168631403 + AT_rich Low_complexity Low_complexity 1 27 0 1112 53 0 0 chr5 30998747 30998879 -168631271 - AluY SINE Alu -179 132 1 228 282 104 43 chr5 30999448 30999611 -168630539 + L2 LINE L2 1211 1383 -1931 843 327 74 13 chr5 30999691 31000220 -168629930 + L2 LINE L2 1827 2387 -927 1698 268 85 78 chr5 31000435 31001320 -168628830 + HAL1 LINE L1 146 1036 -1471 880 227 40 74 chr5 31001344 31001591 -168628559 + HAL1 LINE L1 1953 2184 -323 243 79 0 0 chr5 31001591 31001629 -168628521 + (TG)n Simple_repeat Simple_repeat 2 39 0 880 227 40 74 chr5 31001629 31001760 -168628390 + HAL1 LINE L1 2184 2318 -189 309 250 14 0 chr5 31001761 31001833 -168628317 + MER116 DNA Mariner 1 73 -7 420 267 124 0 chr5 31001834 31001995 -168628155 + HAL1 LINE L1 2326 2506 -1 46 62 0 0 chr5 31002619 31002700 -168627450 + AT_rich Low_complexity Low_complexity 1 81 0 2643 99 14 11 chr5 31002959 31003324 -168626826 - THE1C LTR MaLR -9 366 1 303 265 41 10 chr5 31005392 31005490 -168624660 + L2 LINE L2 3169 3269 -3 321 252 156 15 chr5 31005750 31005885 -168624265 + MER117 DNA MER1_type 3 156 -41 271 127 42 84 chr5 31006093 31006164 -168623986 + MLT1J1 LTR MaLR 50 117 -329 276 30 0 0 chr5 31006670 31006703 -168623447 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 207 69 0 0 chr5 31007335 31007364 -168622786 + (T)n Simple_repeat Simple_repeat 1 29 0 180 0 0 0 chr5 31007448 31007468 -168622682 + (T)n Simple_repeat Simple_repeat 1 20 0 189 0 0 0 chr5 31008717 31008738 -168621412 + (A)n Simple_repeat Simple_repeat 1 21 0 2519 54 0 10 chr5 31009920 31010233 -168619917 + AluY SINE Alu 1 310 -1 345 47 0 0 chr5 31011557 31011600 -168618550 + (TG)n Simple_repeat Simple_repeat 1 43 0 554 269 12 25 chr5 31015298 31015458 -168614692 - MIR SINE MIR 0 262 105 303 246 15 0 chr5 31015672 31015737 -168614413 - L2 LINE L2 0 3313 3248 2233 117 0 3 chr5 31015913 31016212 -168613938 - AluSx SINE Alu -14 298 1 210 262 106 71 chr5 31016249 31016390 -168613760 - L2 LINE L2 -543 2771 2626 241 263 121 10 chr5 31016948 31017047 -168613103 + MIR SINE MIR 97 206 -56 336 362 73 13 chr5 31017288 31017520 -168612630 + MIR SINE MIR 3 248 -14 195 129 0 0 chr5 31019391 31019422 -168610728 + (CATATA)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr5 31019684 31019708 -168610442 + AT_rich Low_complexity Low_complexity 1 24 0 826 143 66 55 chr5 31019764 31019946 -168610204 - MER20 DNA MER1_type -34 185 2 690 335 23 5 chr5 31021169 31021387 -168608763 - MIR SINE MIR -18 244 23 900 267 105 28 chr5 31021588 31021951 -168608199 - L2 LINE L2 -5 3308 2918 22 0 0 0 chr5 31022242 31022264 -168607886 + AT_rich Low_complexity Low_complexity 1 22 0 1486 11 6 11 chr5 31022645 31022823 -168607327 + L1PA5 LINE L1 5978 6154 0 288 0 0 0 chr5 31024000 31024032 -168606118 + (TG)n Simple_repeat Simple_repeat 1 32 0 251 291 52 112 chr5 31024109 31024254 -168605896 - L2 LINE L2 -420 2894 2742 183 42 0 0 chr5 31024254 31024278 -168605872 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 251 291 52 112 chr5 31024278 31024296 -168605854 - L2 LINE L2 -572 2742 2724 1713 155 30 0 chr5 31024296 31024561 -168605589 - AluJb SINE Alu -39 273 1 251 291 52 112 chr5 31024561 31024647 -168605503 - L2 LINE L2 -590 2724 2659 199 322 63 21 chr5 31024648 31024791 -168605359 - L2 LINE L2 -894 2420 2272 182 200 0 0 chr5 31024902 31024937 -168605213 + L2 LINE L2 3264 3298 -15 1339 154 157 27 chr5 31025085 31025417 -168604733 + THE1C LTR MaLR 1 375 0 9111 145 10 24 chr5 31025419 31027020 -168603130 + MSTA-int LTR MaLR 3 1580 0 1572 141 258 3 chr5 31027020 31027361 -168602789 + MSTA LTR MaLR 1 428 0 1055 267 59 34 chr5 31029705 31030306 -168599844 + L2 LINE L2 2661 3285 -28 653 83 0 0 chr5 31030418 31030502 -168599648 - AluS SINE Alu -228 84 1 1007 225 113 6 chr5 31031061 31031372 -168598778 - MER2 DNA MER2_type 0 344 1 2452 76 0 0 chr5 31032284 31032585 -168597565 - AluSc SINE Alu -8 301 1 395 293 21 21 chr5 31032604 31032744 -168597406 + MER5B DNA MER1_type 37 176 -2 527 252 32 92 chr5 31033597 31033815 -168596335 + L2 LINE L2 3070 3274 -39 1317 43 0 22 chr5 31034001 31034185 -168595965 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 280 111 37 0 chr5 31034187 31034241 -168595909 + CT-rich Low_complexity Low_complexity 3 58 0 1808 151 48 0 chr5 31034243 31034534 -168595616 - AluSx SINE Alu -7 305 1 1658 185 3 7 chr5 31035845 31036132 -168594018 - AluJo SINE Alu -22 290 5 535 323 119 16 chr5 31038306 31038625 -168591525 - L3b LINE CR1 -117 1466 1115 796 303 78 24 chr5 31038901 31039284 -168590866 - MLT1I LTR MaLR -3 406 3 378 269 21 50 chr5 31040218 31040359 -168589791 + MLT1K LTR MaLR 450 586 -2 541 326 46 17 chr5 31041076 31041315 -168588835 - MIR SINE MIR -11 251 6 560 307 0 28 chr5 31041399 31041578 -168588572 - MER91B DNA MER1_type -16 174 1 189 314 80 22 chr5 31043205 31043342 -168586808 - MIR3 SINE MIR -6 202 58 549 284 91 11 chr5 31043730 31043906 -168586244 + L3 LINE CR1 1355 1544 -33 351 238 0 8 chr5 31044110 31044228 -168585922 - L1MC4 LINE L1 -1339 6983 1995 201 74 0 0 chr5 31044230 31044257 -168585893 + (CA)n Simple_repeat Simple_repeat 2 28 0 182 347 31 41 chr5 31044821 31044919 -168585231 - MIR3 SINE MIR -31 177 81 259 277 0 15 chr5 31044951 31045016 -168585134 - MIR3 SINE MIR -23 185 122 319 328 82 6 chr5 31045443 31045614 -168584536 + MIR SINE MIR 65 248 -14 253 156 266 16 chr5 31046939 31047003 -168583147 - MADE1 DNA Mariner 0 80 1 21 0 0 0 chr5 31048057 31048078 -168582072 + AT_rich Low_complexity Low_complexity 1 21 0 407 240 58 0 chr5 31048253 31048357 -168581793 + L1ME LINE L1 5508 5617 -504 591 187 9 0 chr5 31049972 31050079 -168580071 - L2 LINE L2 0 3313 3206 1195 303 46 39 chr5 31100113 31100724 -168529426 + HERVL LTR ERVL 3680 4294 -1360 346 341 61 0 chr5 31100813 31100977 -168529173 + LTR16A LTR ERVL 79 252 -198 704 87 0 29 chr5 31103025 31103128 -168527022 + HY3 scRNA scRNA 1 100 -1 2168 110 0 7 chr5 31103420 31103719 -168526431 + AluSx SINE Alu 1 297 -15 2188 102 0 56 chr5 31103737 31104061 -168526089 + AluSx SINE Alu 1 306 -6 1663 160 26 45 chr5 31104374 31104520 -168525630 + AluJb SINE Alu 1 148 -164 2342 97 3 0 chr5 31104520 31104818 -168525332 + AluSp SINE Alu 1 299 -14 1019 184 42 5 chr5 31104771 31104983 -168525167 + AluJb SINE Alu 87 306 -6 1663 160 26 45 chr5 31104818 31104983 -168525167 + AluJb SINE Alu 148 306 -6 566 237 20 20 chr5 31104996 31105148 -168525002 + L1MB8 LINE L1 6027 6178 0 22 88 0 0 chr5 31105297 31105354 -168524796 + AT_rich Low_complexity Low_complexity 1 57 0 23 0 0 0 chr5 31105490 31105513 -168524637 + AT_rich Low_complexity Low_complexity 1 23 0 2214 108 3 0 chr5 31106170 31106467 -168523683 - AluSx SINE Alu -14 298 1 1593 174 23 10 chr5 31107098 31107403 -168522747 + L1MB2 LINE L1 5863 6171 0 30 0 0 0 chr5 31107465 31107495 -168522655 + AT_rich Low_complexity Low_complexity 1 30 0 504 225 69 81 chr5 31107562 31107722 -168522428 - MIR SINE MIR -95 167 10 264 326 82 20 chr5 31107799 31107897 -168522253 - L2 LINE L2 -23 3249 3146 1681 157 40 23 chr5 31108768 31109068 -168521082 + AluJo SINE Alu 1 305 -7 240 35 0 0 chr5 31109265 31109294 -168520856 + (CA)n Simple_repeat Simple_repeat 1 29 0 227 200 18 0 chr5 31109315 31109370 -168520780 + (CA)n Simple_repeat Simple_repeat 2 57 0 1596 231 122 49 chr5 31109875 31110429 -168519721 + MLT1E2 LTR MaLR 4 623 -3 333 68 0 0 chr5 31111572 31111616 -168518534 + (CA)n Simple_repeat Simple_repeat 2 45 0 1979 141 0 13 chr5 31111700 31112005 -168518145 + AluJo SINE Alu 1 301 -11 1340 157 19 9 chr5 31112081 31112297 -168517853 + MER20 DNA MER1_type 1 218 -1 699 242 36 62 chr5 31112698 31112892 -168517258 + MER5A DNA MER1_type 1 189 0 2088 136 3 0 chr5 31113315 31113617 -168516533 + AluJb SINE Alu 1 303 -9 391 272 98 22 chr5 31114113 31114337 -168515813 - L1ME4a LINE L1 -226 5895 5655 313 246 56 14 chr5 31114358 31114496 -168515654 - L1M2 LINE L1 -722 5575 5422 307 289 149 82 chr5 31114704 31115176 -168514974 - L1ME4a LINE L1 -989 5157 4718 769 151 0 17 chr5 31115176 31115295 -168514855 + FLAM_C SINE Alu 1 117 -16 307 289 149 82 chr5 31115295 31115366 -168514784 - L1ME4a LINE L1 -1428 4718 4653 1914 167 45 12 chr5 31115366 31115702 -168514448 - MER7A DNA MER2_type 0 346 2 307 289 149 82 chr5 31115702 31115815 -168514335 - L1ME4a LINE L1 -1493 4653 4456 447 269 88 0 chr5 31116002 31116162 -168513988 - MIR SINE MIR -22 240 67 342 294 100 61 chr5 31116953 31117364 -168512786 - L1ME4a LINE L1 -2028 4118 3692 428 288 184 14 chr5 31117849 31118061 -168512089 - MIR SINE MIR -4 258 11 228 271 139 8 chr5 31118203 31118332 -168511818 - L1ME4a LINE L1 -3264 2882 2737 215 317 33 0 chr5 31119002 31119062 -168511088 + MIR SINE MIR 45 106 -102 2495 83 0 0 chr5 31121012 31121325 -168508825 + AluSq SINE Alu 1 313 0 2224 122 0 13 chr5 31122231 31122367 -168507783 + AluSx SINE Alu 1 137 -175 2427 88 3 0 chr5 31122367 31122674 -168507476 + AluSx SINE Alu 1 308 -4 2224 122 0 13 chr5 31122674 31122848 -168507302 + AluSx SINE Alu 137 307 -5 806 320 96 64 chr5 31124643 31124813 -168505337 + L2 LINE L2 1611 1774 -1540 1199 214 130 49 chr5 31124813 31125159 -168504991 + MLT1A2 LTR MaLR 1 374 0 806 320 96 64 chr5 31125159 31125995 -168504155 + L2 LINE L2 1774 2650 -664 2306 80 40 0 chr5 31126773 31127072 -168503078 + AluY SINE Alu 1 311 0 991 167 13 13 chr5 31127448 31127604 -168502546 - FRAM SINE Alu -10 156 1 730 85 0 0 chr5 31127877 31127971 -168502179 + AluSp/q SINE Alu 211 304 -9 338 289 70 106 chr5 31128001 31128274 -168501876 + L2 LINE L2 2995 3257 -15 222 310 52 9 chr5 31128354 31128470 -168501680 - L2 LINE L2 -1 3271 3151 309 138 52 17 chr5 31130046 31130104 -168500046 - MIR SINE MIR -187 75 16 2124 117 3 0 chr5 31130275 31130573 -168499577 - AluSx SINE Alu -13 299 1 21 0 0 0 chr5 31130582 31130603 -168499547 + AT_rich Low_complexity Low_complexity 1 21 0 184 273 0 45 chr5 31130929 31130995 -168499155 - L3 LINE CR1 -2 1575 1513 1172 170 5 45 chr5 31131017 31131241 -168498909 + AluJo SINE Alu 84 298 -14 885 191 30 6 chr5 31131882 31132050 -168498100 - MER58B DNA MER1_type 0 341 170 944 161 68 6 chr5 31132050 31132211 -168497939 + FAM SINE Alu 1 171 -4 1289 195 17 0 chr5 31132252 31132493 -168497657 - Charlie1a DNA MER1_type -276 1179 935 966 215 139 11 chr5 31132508 31132731 -168497419 - Charlie1a DNA MER1_type -2229 532 339 189 0 0 0 chr5 31132731 31132752 -168497398 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 966 215 139 11 chr5 31132752 31132978 -168497172 - Charlie1a DNA MER1_type -2422 339 4 2376 81 0 10 chr5 31133565 31133872 -168496278 + AluY SINE Alu 8 311 0 945 288 156 9 chr5 31135057 31135487 -168494663 - MLT1J LTR MaLR -16 495 3 542 218 98 12 chr5 31136068 31136231 -168493919 - MER58C DNA MER1_type -1 214 32 1746 173 51 27 chr5 31136335 31136671 -168493479 - MER2 DNA MER2_type 0 344 1 1713 154 13 33 chr5 31137080 31137379 -168492771 + AluJb SINE Alu 1 293 -19 482 286 13 0 chr5 31137390 31137540 -168492610 + MIR SINE MIR 38 188 -63 23 86 0 0 chr5 31138050 31138108 -168492042 + AT_rich Low_complexity Low_complexity 1 58 0 396 0 0 0 chr5 31138425 31138469 -168491681 + (TG)n Simple_repeat Simple_repeat 2 45 0 1258 164 36 86 chr5 31138829 31139109 -168491041 + AluJo SINE Alu 39 304 -8 557 211 134 6 chr5 31139136 31139307 -168490843 - MIR SINE MIR 0 262 70 2219 68 0 58 chr5 31139488 31139798 -168490352 + AluY SINE Alu 1 292 -19 2120 125 0 7 chr5 31140605 31140910 -168489240 + AluJb SINE Alu 1 303 -9 2546 44 0 7 chr5 31141621 31141918 -168488232 + AluY SINE Alu 1 295 -16 1544 171 19 11 chr5 31141985 31142254 -168487896 + AluJo SINE Alu 14 284 -28 23 0 0 0 chr5 31142290 31142313 -168487837 + AT_rich Low_complexity Low_complexity 1 23 0 2243 99 10 0 chr5 31142383 31142677 -168487473 - AluSq SINE Alu -16 297 1 271 310 170 0 chr5 31143603 31143703 -168486447 - MIR SINE MIR -73 135 19 2267 144 40 11 chr5 31143844 31144191 -168485959 - THE1B LTR MaLR -7 357 1 12211 84 23 13 chr5 31144191 31145339 -168484811 - THE1B-int LTR MaLR 0 1580 410 2186 125 3 0 chr5 31145339 31145634 -168484516 + AluSx SINE Alu 1 296 -16 12211 84 23 13 chr5 31145634 31146049 -168484101 - THE1B-int LTR MaLR -1170 410 1 2245 137 41 52 chr5 31146049 31146257 -168483893 - THE1B LTR MaLR 0 364 160 2256 112 3 0 chr5 31146257 31146560 -168483590 + AluSp SINE Alu 1 304 -9 2245 137 41 52 chr5 31146560 31146717 -168483433 - THE1B LTR MaLR -204 160 3 298 143 130 39 chr5 31146800 31146877 -168483273 - LTR23 LTR ERV1 -78 359 276 1962 144 20 10 chr5 31146913 31147211 -168482939 + AluJb SINE Alu 1 301 -11 2338 81 14 0 chr5 31147885 31148181 -168481969 - AluSp SINE Alu -13 300 1 22 0 0 0 chr5 31148388 31148410 -168481740 + AT_rich Low_complexity Low_complexity 1 22 0 552 133 105 0 chr5 31148417 31148522 -168481628 + L1MA4 LINE L1 6178 6293 -7 2445 177 115 0 chr5 31148757 31149210 -168480940 + MLT1D LTR MaLR 1 505 0 340 241 167 0 chr5 31149821 31149929 -168480221 + MIR SINE MIR 84 209 -53 231 61 0 0 chr5 31150468 31150501 -168479649 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 556 231 28 0 chr5 31150552 31150660 -168479490 - L2 LINE L2 0 3313 3203 837 135 7 64 chr5 31150781 31150922 -168479228 - FLAM_C SINE Alu 0 133 1 23 0 0 0 chr5 31151884 31151907 -168478243 + AT_rich Low_complexity Low_complexity 1 23 0 2121 103 0 26 chr5 31152514 31152824 -168477326 + AluY SINE Alu 1 302 -9 2041 134 7 13 chr5 31152894 31153201 -168476949 - AluJo SINE Alu -7 305 1 2385 78 10 7 chr5 31153468 31153775 -168476375 - AluSc SINE Alu -1 308 1 894 229 117 65 chr5 31153776 31154117 -168476033 - L1MA9 LINE L1 -38 6274 5916 2470 38 7 3 chr5 31154672 31154965 -168475185 + AluY SINE Alu 1 294 -17 2423 76 0 7 chr5 31155162 31155465 -168474685 + AluSg SINE Alu 1 301 -9 194 357 57 0 chr5 31156461 31156531 -168473619 + MIR SINE MIR 29 102 -160 226 341 120 29 chr5 31156542 31156750 -168473400 + L2 LINE L2 3046 3272 0 424 263 78 54 chr5 31157892 31158394 -168471756 + L1MC4a LINE L1 4325 4838 -1308 469 290 93 37 chr5 31158394 31158663 -168471487 - MLT1J2 LTR MaLR -8 442 159 372 239 33 0 chr5 31158670 31158762 -168471388 - MLT1J1 LTR MaLR -351 95 1 1672 163 7 34 chr5 31158976 31159270 -168470880 - AluJb SINE Alu -16 296 11 213 94 0 0 chr5 31159282 31159314 -168470836 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 610 318 62 31 chr5 31159317 31159669 -168470481 - HERV16 LTR ERVL -4375 621 259 989 304 43 35 chr5 31159871 31160239 -168469911 - LTR16C LTR ERVL -1 490 120 477 302 12 64 chr5 31160434 31160606 -168469544 + L1MC4a LINE L1 5494 5656 -2152 2113 186 62 105 chr5 31160619 31161003 -168469147 + LTR8A LTR ERV1 1 347 -380 2265 126 3 0 chr5 31161003 31161304 -168468846 - AluSx SINE Alu -10 302 1 2113 186 62 105 chr5 31161304 31161565 -168468585 + LTR8A LTR ERV1 347 618 -109 2691 104 16 16 chr5 31161582 31161957 -168468193 - THE1C LTR MaLR 0 375 1 10779 105 33 11 chr5 31161957 31162014 -168468136 - THE1C-int LTR MaLR 0 1580 1526 2154 117 3 0 chr5 31162014 31162297 -168467853 + AluSx SINE Alu 1 284 -28 366 23 0 0 chr5 31162297 31162340 -168467810 + (CA)n Simple_repeat Simple_repeat 2 44 0 10779 105 33 11 chr5 31162340 31163811 -168466339 - THE1C-int LTR MaLR -53 1527 17 2783 101 13 16 chr5 31163815 31164191 -168465959 - THE1C LTR MaLR 0 375 1 411 117 64 138 chr5 31164194 31164288 -168465862 + LTR8A LTR ERV1 641 727 0 256 309 133 6 chr5 31164311 31164492 -168465658 + L1MC4a LINE L1 5712 5915 -1893 180 111 0 0 chr5 31164498 31164525 -168465625 + (T)n Simple_repeat Simple_repeat 1 27 0 2247 118 42 63 chr5 31164746 31165129 -168465021 + THE1C LTR MaLR 1 375 0 1899 149 10 13 chr5 31165298 31165434 -168464716 + AluJb SINE Alu 1 136 -176 2254 107 3 3 chr5 31165434 31165733 -168464417 + AluSq SINE Alu 1 299 -14 1899 149 10 13 chr5 31165733 31165898 -168464252 + AluJb SINE Alu 136 301 -11 451 302 71 4 chr5 31166117 31166399 -168463751 + L1MC4a LINE L1 4779 5076 -1070 658 282 99 49 chr5 31166541 31167013 -168463137 + L1MC4a LINE L1 5265 5754 -367 598 154 442 24 chr5 31167119 31167327 -168462823 + LTR48 LTR ERV1 1 295 -492 795 184 93 77 chr5 31167346 31167674 -168462476 + LTR48 LTR ERV1 245 784 -3 229 65 0 0 chr5 31167690 31167736 -168462414 - LTR66 LTR ERVL -171 439 394 384 59 0 0 chr5 31167746 31167797 -168462353 + (CA)n Simple_repeat Simple_repeat 2 52 0 1415 164 44 25 chr5 31167799 31168106 -168462044 - AluJb SINE Alu 0 316 5 24 0 0 0 chr5 31168120 31168144 -168462006 + AT_rich Low_complexity Low_complexity 1 24 0 850 242 10 10 chr5 31168151 31168349 -168461801 - MER3 DNA MER1_type -3 206 9 448 277 157 6 chr5 31168387 31168546 -168461604 + MER5A DNA MER1_type 7 189 0 4086 175 150 144 chr5 31169427 31169461 -168460689 + L1MC4a LINE L1 5874 5906 -1902 2243 87 6 10 chr5 31169461 31169772 -168460378 + AluSq SINE Alu 2 311 -2 4086 175 150 144 chr5 31169772 31169810 -168460340 + L1MC4a LINE L1 5906 5942 -1866 207 0 0 0 chr5 31169810 31169833 -168460317 + (TGGGGG)n Simple_repeat Simple_repeat 6 28 0 676 188 23 30 chr5 31169837 31169970 -168460180 + FLAM_C SINE Alu 2 133 0 4086 175 150 144 chr5 31169970 31170282 -168459868 + L1MC4a LINE L1 5944 6253 -1555 2399 97 0 0 chr5 31170282 31170581 -168459569 + AluSx SINE Alu 1 299 -13 4086 175 150 144 chr5 31170581 31170813 -168459337 + L1MC4a LINE L1 6253 6482 -1326 806 134 7 78 chr5 31170813 31170899 -168459251 - FLAM_C SINE Alu -180 132 58 4302 105 22 2 chr5 31170899 31171489 -168458661 + LTR43 LTR ERV1 1 602 0 806 134 7 78 chr5 31171489 31171544 -168458606 - FLAM_C SINE Alu -254 58 1 4086 175 150 144 chr5 31171544 31172702 -168457448 + L1MC4a LINE L1 6482 7808 0 1902 53 0 4 chr5 31172925 31173188 -168456962 + AluY SINE Alu 59 320 0 4213 149 75 53 chr5 31173189 31173646 -168456504 + L1MB4 LINE L1 5278 5723 -457 261 0 0 0 chr5 31173646 31173675 -168456475 + (TA)n Simple_repeat Simple_repeat 2 30 0 4213 149 75 53 chr5 31173675 31173829 -168456321 + L1MB4 LINE L1 5723 5872 -308 2676 100 14 14 chr5 31173829 31174190 -168455960 + THE1B LTR MaLR 1 361 -3 4213 149 75 53 chr5 31174190 31174331 -168455819 + L1MB4 LINE L1 5872 6008 -172 2152 126 0 0 chr5 31174331 31174625 -168455525 + AluSx SINE Alu 2 295 -17 4213 149 75 53 chr5 31174625 31174736 -168455414 + L1MB4 LINE L1 6008 6162 -18 723 264 48 9 chr5 31175160 31175387 -168454763 + L1M4 LINE L1 3359 3594 -2552 1071 101 89 0 chr5 31175388 31175546 -168454604 - AluSg/x SINE Alu -4 306 135 1038 160 0 0 chr5 31175575 31175725 -168454425 + FRAM SINE Alu 1 150 -16 659 88 29 0 chr5 31175729 31175831 -168454319 + (GGAGAA)n Simple_repeat Simple_repeat 2 106 0 1032 104 0 17 chr5 31175832 31176005 -168454145 + (GAAA)n Simple_repeat Simple_repeat 4 173 0 282 29 0 0 chr5 31176007 31176042 -168454108 + (GGGA)n Simple_repeat Simple_repeat 1 35 0 1000 194 26 67 chr5 31176072 31176340 -168453810 + L1M4 LINE L1 3764 4020 -2126 2260 67 0 11 chr5 31176440 31176724 -168453426 - AluY SINE Alu -30 281 1 342 221 0 0 chr5 31176726 31176821 -168453329 + L1M4 LINE L1 4376 4470 -1676 270 168 80 24 chr5 31176859 31176984 -168453166 + (TTAA)n Simple_repeat Simple_repeat 4 135 0 207 0 0 0 chr5 31177640 31177663 -168452487 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1591 203 130 53 chr5 31177991 31178117 -168452033 + MLT1D LTR MaLR 1 116 -389 863 135 8 30 chr5 31178117 31178250 -168451900 + FLAM_C SINE Alu 1 130 -3 1591 203 130 53 chr5 31178250 31178592 -168451558 + MLT1D LTR MaLR 116 505 0 226 175 100 0 chr5 31178608 31178648 -168451502 - Alu SINE Alu -140 159 116 358 152 45 0 chr5 31178709 31178775 -168451375 - L1MB7 LINE L1 -207 5977 5909 248 245 208 28 chr5 31179104 31179210 -168450940 + L2 LINE L2 3189 3313 0 2492 161 78 33 chr5 31179676 31180228 -168449922 - MER34C LTR ERV1 -5 580 4 370 65 98 33 chr5 31180427 31180519 -168449631 + GA-rich Low_complexity Low_complexity 5 102 0 2083 114 24 0 chr5 31180606 31180895 -168449255 + AluSx SINE Alu 1 296 -16 891 259 62 99 chr5 31181442 31181501 -168448649 - HAL1 LINE L1 0 2507 2447 2411 71 0 0 chr5 31181501 31181783 -168448367 + AluSx SINE Alu 9 290 -22 891 259 62 99 chr5 31181783 31182067 -168448083 - HAL1 LINE L1 -60 2447 2154 2135 151 0 0 chr5 31182067 31182378 -168447772 - AluSx SINE Alu -1 311 1 891 259 62 99 chr5 31182378 31182829 -168447321 - HAL1 LINE L1 -353 2154 1742 267 133 0 0 chr5 31182876 31182921 -168447229 + (TG)n Simple_repeat Simple_repeat 1 45 0 3209 118 35 0 chr5 31182970 31183421 -168446729 - LTR24 LTR ERV1 0 467 1 502 211 90 8 chr5 31183421 31183554 -168446596 - LTR24-int LTR ERV1 0 5123 4980 2104 130 3 0 chr5 31183583 31183883 -168446267 + AluSx SINE Alu 4 304 -8 2017 118 7 0 chr5 31184348 31184618 -168445532 - AluSx SINE Alu -14 298 27 591 232 97 69 chr5 31184618 31184907 -168445243 - LTR9 LTR ERV1 0 612 316 * 1393 184 19 126 chr5 31184881 31185016 -168445134 - LTR9 LTR ERV1 -229 383 235 2521 75 0 0 chr5 31185016 31185321 -168444829 - AluY SINE Alu -1 310 6 1393 184 19 126 chr5 31185321 31185614 -168444536 - LTR9 LTR ERV1 -377 235 1 541 346 39 41 chr5 31185698 31186000 -168444150 - LTR24-int LTR ERV1 -596 6526 6224 2497 163 74 59 chr5 31186000 31186539 -168443611 - LTR10B LTR ERV1 0 547 1 541 346 39 41 chr5 31186539 31186750 -168443400 - LTR24-int LTR ERV1 -898 6224 6014 1265 135 0 50 chr5 31186881 31187118 -168443032 - AluSg/x SINE Alu 0 316 90 507 176 12 0 chr5 31187218 31187303 -168442847 + AluYa5 SINE Alu 84 169 -142 * 680 117 0 19 chr5 31187298 31187401 -168442749 + AluSg/x SINE Alu 198 298 -11 2270 102 0 0 chr5 31187406 31187700 -168442450 + AluSq SINE Alu 1 294 -19 927 172 55 0 chr5 31187784 31187947 -168442203 - AluSg/x SINE Alu -14 296 125 2253 121 0 0 chr5 31188181 31188487 -168441663 + AluSg SINE Alu 5 310 0 2372 95 3 0 chr5 31189142 31189447 -168440703 - AluSp SINE Alu -7 306 1 334 288 35 70 chr5 31190318 31190547 -168439603 - LTR24-int LTR ERV1 -3797 4938 4718 324 305 70 91 chr5 31190928 31191147 -168439003 - LTR24-int LTR ERV1 -4374 4052 3830 1812 119 101 0 chr5 31191147 31191415 -168438735 + AluSg SINE Alu 1 295 -15 324 305 70 91 chr5 31191415 31191599 -168438551 - LTR24-int LTR ERV1 -4596 3830 3660 2288 87 33 3 chr5 31191599 31191899 -168438251 - AluSg1 SINE Alu 0 309 1 324 305 70 91 chr5 31191899 31192012 -168438138 - LTR24-int LTR ERV1 -4766 3660 3546 675 309 102 25 chr5 31192077 31192544 -168437606 - LTR24-int LTR ERV1 -4064 3730 219 682 164 19 0 chr5 31192670 31192774 -168437376 - U6 snRNA snRNA -1 106 1 2125 125 0 0 chr5 31192946 31193234 -168436916 - AluSc SINE Alu -21 288 1 2449 82 3 0 chr5 31194208 31194512 -168435638 - AluY SINE Alu -6 305 1 232 33 67 0 chr5 31194610 31194640 -168435510 + U6 snRNA snRNA 1 32 -75 1037 181 0 0 chr5 31194647 31194813 -168435337 + AluJb SINE Alu 131 296 -16 389 187 0 22 chr5 31194942 31195033 -168435117 + GA-rich Low_complexity Low_complexity 2 90 0 2388 53 0 20 chr5 31195124 31195423 -168434727 + AluY SINE Alu 1 293 -18 481 192 0 29 chr5 31195715 31195819 -168434331 - LTR24-int LTR ERV1 -4378 745 645 1467 218 24 36 chr5 31196146 31196619 -168433531 - LTR24-int LTR ERV1 -4515 608 1 2883 150 17 28 chr5 31196619 31196761 -168433389 - LTR24 LTR ERV1 0 467 325 2372 76 3 16 chr5 31196761 31197064 -168433086 + AluSc SINE Alu 1 299 -10 2883 150 17 28 chr5 31197064 31197393 -168432757 - LTR24 LTR ERV1 -142 325 1 864 221 16 81 chr5 31197393 31197701 -168432449 - HAL1 LINE L1 -835 1672 1385 2115 132 0 3 chr5 31197727 31198031 -168432119 - AluJo SINE Alu -9 303 1 825 259 45 21 chr5 31198057 31198389 -168431761 - HAL1 LINE L1 -1132 1375 1036 312 284 96 76 chr5 31198397 31198434 -168431716 - HAL1 LINE L1 -1674 833 798 2354 70 36 3 chr5 31198434 31198735 -168431415 + AluY SINE Alu 1 311 0 312 284 96 76 chr5 31198735 31198947 -168431203 - HAL1 LINE L1 -1709 798 579 240 267 15 92 chr5 31198982 31199113 -168431037 + HAL1 LINE L1 742 862 -1645 2147 120 0 10 chr5 31199480 31199780 -168430370 - AluSx SINE Alu -11 301 5 359 306 105 8 chr5 31199876 31200029 -168430121 + MIR SINE MIR 49 214 -48 744 289 101 45 chr5 31200347 31200752 -168429398 - LTR33 LTR ERVL 0 521 83 2374 104 3 0 chr5 31200752 31201061 -168429089 + AluSq SINE Alu 2 311 -2 744 289 101 45 chr5 31201061 31201142 -168429008 - LTR33 LTR ERVL -438 83 8 2079 125 17 0 chr5 31202374 31202671 -168427479 + AluSq SINE Alu 1 302 -11 275 296 139 0 chr5 31202936 31203051 -168427099 - MER102a DNA MER1_type -1 329 199 273 302 52 0 chr5 31203087 31203183 -168426967 - MER102a DNA MER1_type -229 101 1 537 203 25 0 chr5 31203192 31203310 -168426840 + MER5B DNA MER1_type 2 122 -56 2451 77 3 0 chr5 31203401 31203699 -168426451 + AluSp SINE Alu 1 299 -14 833 133 126 7 chr5 31203834 31203985 -168426165 - MER3 DNA MER1_type 0 209 41 1826 165 0 46 chr5 31204085 31204412 -168425738 - AluSx SINE Alu 0 312 1 925 172 12 12 chr5 31204497 31204666 -168425484 + FRAM SINE Alu 3 171 -5 2312 94 0 0 chr5 31205510 31205808 -168424342 + AluSx SINE Alu 7 304 -8 2191 114 3 3 chr5 31206157 31206454 -168423696 - AluSx SINE Alu -15 297 1 216 0 0 0 chr5 31206454 31206478 -168423672 + (T)n Simple_repeat Simple_repeat 1 24 0 224 352 65 0 chr5 31206612 31206720 -168423430 - L2 LINE L2 -42 3230 3116 2114 97 3 10 chr5 31207381 31207691 -168422459 + AluSg1 SINE Alu 1 308 -1 1986 137 0 0 chr5 31207752 31208052 -168422098 - AluSx SINE Alu -12 300 1 1009 131 0 0 chr5 31208393 31208546 -168421604 - MER6A DNA MER2_type -1 604 452 1651 186 0 0 chr5 31208546 31208831 -168421319 - AluJb SINE Alu -19 293 9 572 163 0 0 chr5 31208831 31208923 -168421227 - AluJ/FLAM SINE Alu -219 93 2 2661 141 51 0 chr5 31208923 31209357 -168420793 - MER6A DNA MER2_type -149 456 1 2003 133 0 13 chr5 31209428 31209744 -168420406 - AluSx SINE Alu 0 312 1 2225 93 3 3 chr5 31209951 31210253 -168419897 + AluSp SINE Alu 1 302 -11 685 217 49 14 chr5 31210647 31210790 -168419360 + AluJo SINE Alu 4 151 -161 349 89 0 0 chr5 31210790 31210835 -168419315 - Alu SINE Alu -256 45 1 270 278 46 74 chr5 31210840 31210948 -168419202 - MIR SINE MIR -61 147 43 264 264 0 0 chr5 31211158 31211211 -168418939 + L2 LINE L2 3206 3258 -14 1209 150 21 30 chr5 31212054 31212287 -168417863 - AluJo SINE Alu -73 239 9 314 23 23 0 chr5 31212320 31212363 -168417787 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 9270 67 4 9 chr5 31212363 31214331 -168415819 - L1PA6 LINE L1 -24 6130 4170 2422 59 0 7 chr5 31214576 31214882 -168415268 + AluY SINE Alu 1 304 -7 1868 72 0 4 chr5 31216084 31216321 -168413829 + AluSq SINE Alu 2 237 -76 2138 96 0 0 chr5 31216553 31216871 -168413279 - AluSx SINE Alu 0 318 1 1232 249 87 15 chr5 31217277 31217610 -168412540 - LTR16A LTR ERVL -8 442 86 1882 123 0 45 chr5 31217736 31217874 -168412276 + AluSx SINE Alu 1 144 -168 2126 76 59 0 chr5 31217874 31218163 -168411987 + AluSq SINE Alu 3 308 -5 1882 123 0 45 chr5 31218163 31218333 -168411817 + AluSx SINE Alu 144 295 -17 2108 85 7 0 chr5 31218827 31219131 -168411019 + AluSq SINE Alu 1 306 0 2475 207 65 108 chr5 31219835 31219982 -168410168 - L1MC4a LINE L1 0 7808 7656 1250 180 172 8 chr5 31219982 31220238 -168409912 - AluJb SINE Alu -4 298 1 2475 207 65 108 chr5 31220238 31220900 -168409250 - L1MC4a LINE L1 -152 7656 7127 1586 164 33 30 chr5 31220906 31221210 -168408940 - AluJo SINE Alu -7 305 1 685 103 7 267 chr5 31221235 31221360 -168408790 + Charlie5 DNA MER1_type 2403 2480 -144 420 119 0 0 chr5 31221360 31221419 -168408731 + AluJ/FRAM SINE Alu 232 290 -22 685 103 7 267 chr5 31221419 31221535 -168408615 + Charlie5 DNA MER1_type 2480 2624 0 427 257 19 9 chr5 31221562 31221667 -168408483 + MIR SINE MIR 155 260 -2 2156 105 20 0 chr5 31221844 31222150 -168408000 + AluSx SINE Alu 1 312 0 1159 244 8 0 chr5 31222748 31222986 -168407164 - MIR SINE MIR -21 241 2 1198 244 112 27 chr5 31223913 31224351 -168405799 - LTR33 LTR ERVL 0 521 47 560 312 65 96 chr5 31224725 31224926 -168405224 - L2 LINE L2 0 3272 3066 1820 148 3 7 chr5 31224926 31225229 -168404921 + AluJb SINE Alu 1 302 -10 560 312 65 96 chr5 31225229 31225242 -168404908 - L2 LINE L2 -206 3066 3054 1475 166 50 21 chr5 31225242 31225525 -168404625 + AluJo SINE Alu 9 299 -13 2352 76 3 0 chr5 31225527 31225831 -168404319 + AluSp SINE Alu 1 305 -8 560 312 65 96 chr5 31225831 31226265 -168403885 - L2 LINE L2 -219 3053 2659 801 208 13 0 chr5 31226297 31226446 -168403704 - MER58B DNA MER1_type -12 329 179 1999 116 0 0 chr5 31226453 31226768 -168403382 + AluSx SINE Alu 1 315 0 274 317 241 20 chr5 31226861 31227110 -168403040 - L2 LINE L2 -706 2608 2305 714 153 0 0 chr5 31227142 31227253 -168402897 + AluSg/x SINE Alu 193 303 -6 416 327 132 42 chr5 31227290 31227700 -168402450 - L2 LINE L2 -1862 1452 1006 693 174 76 70 chr5 31228383 31228435 -168401715 - MER96 DNA MER1_type? 0 175 125 1349 136 24 16 chr5 31228435 31228685 -168401465 + L1MA4 LINE L1 6044 6295 -5 693 174 76 70 chr5 31228685 31228804 -168401346 - MER96 DNA MER1_type? -50 125 3 23 0 0 0 chr5 31230535 31230558 -168399592 + AT_rich Low_complexity Low_complexity 1 23 0 1898 153 3 6 chr5 31230558 31230871 -168399279 + AluJb SINE Alu 1 312 0 25 31 0 0 chr5 31230901 31230933 -168399217 + AT_rich Low_complexity Low_complexity 1 32 0 2178 105 0 0 chr5 31231450 31231744 -168398406 - AluSx SINE Alu -18 294 1 2366 87 0 0 chr5 31232222 31232533 -168397617 + AluSq SINE Alu 1 311 -2 237 342 60 13 chr5 31232764 31232913 -168397237 + MER5B DNA MER1_type 23 178 0 1910 144 0 0 chr5 31232942 31233240 -168396910 - AluSx SINE Alu -14 298 1 297 306 90 75 chr5 31234170 31234602 -168395548 - L2 LINE L2 0 3313 2874 181 301 185 34 chr5 31234814 31234960 -168395190 - MIR SINE MIR -1 261 94 23 54 0 0 chr5 31236260 31236297 -168393853 + GC_rich Low_complexity Low_complexity 1 37 0 233 191 0 0 chr5 31236393 31236435 -168393715 + (CGG)n Simple_repeat Simple_repeat 3 44 0 282 164 0 0 chr5 31237142 31237197 -168392953 + CT-rich Low_complexity Low_complexity 3 57 0 1242 177 5 0 chr5 31238674 31238883 -168391267 - AluJb SINE Alu -102 210 1 227 282 109 64 chr5 31240026 31240182 -168389968 + MIR SINE MIR 21 183 -79 1668 104 31 62 chr5 31240922 31241210 -168388940 - AluJb SINE Alu -15 297 19 212 367 109 8 chr5 31242194 31242322 -168387828 - L3b LINE CR1 -3 1580 1440 2239 83 0 3 chr5 31242429 31242729 -168387421 - AluSc SINE Alu -10 299 1 435 281 35 0 chr5 31244318 31244432 -168385718 - MIR SINE MIR -2 260 143 1364 234 105 41 chr5 31244433 31244898 -168385252 - MLT1D LTR MaLR -2 503 9 348 349 31 0 chr5 31244907 31245036 -168385114 - MIR SINE MIR -118 144 12 1200 312 68 11 chr5 31245211 31245756 -168384394 + L2 LINE L2 2125 2700 -614 1686 114 49 92 chr5 31245759 31246127 -168384023 - L1MC1 LINE L1 0 6333 5982 843 158 0 0 chr5 31246138 31246271 -168383879 - FLAM_C SINE Alu 0 133 1 310 279 236 13 chr5 31246271 31246508 -168383642 + L2 LINE L2 2688 2977 -337 186 336 29 19 chr5 31246576 31246680 -168383470 + L2 LINE L2 3139 3243 -70 2207 86 0 17 chr5 31246746 31247048 -168383102 + AluSg SINE Alu 1 297 -13 583 284 0 31 chr5 31247324 31247486 -168382664 - MIR SINE MIR -102 160 4 1580 157 26 0 chr5 31248707 31248882 -168381268 - AluJb SINE Alu 0 309 140 245 27 54 0 chr5 31248882 31248919 -168381231 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1809 135 0 54 chr5 31248919 31249216 -168380934 - AluSg SINE Alu -29 281 1 305 24 24 0 chr5 31249222 31249264 -168380886 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1580 157 26 0 chr5 31249264 31249374 -168380776 - AluJb SINE Alu -173 136 9 2118 118 0 10 chr5 31249818 31250132 -168380018 + AluSx SINE Alu 1 311 -1 330 297 51 8 chr5 31250349 31250467 -168379683 + L2 LINE L2 3189 3311 -2 191 149 0 106 chr5 31250782 31250829 -168379321 - L2 LINE L2 0 3313 3272 2141 86 0 0 chr5 31250872 31251177 -168378973 - AluY SINE Alu 0 305 1 1575 250 213 37 chr5 31251230 31252256 -168377894 + L2 LINE L2 1859 3150 -163 2282 88 3 3 chr5 31252256 31252564 -168377586 - AluSg SINE Alu -2 308 1 1575 250 213 37 chr5 31252564 31252763 -168377387 + L2 LINE L2 3150 3313 0 509 238 98 28 chr5 31252761 31252904 -168377246 - MER5B DNA MER1_type -25 153 1 * 1207 328 88 32 chr5 31254255 31254974 -168375176 + L3 LINE CR1 381 1139 -438 216 344 118 53 chr5 31254997 31255717 -168374433 + L2 LINE L2 1007 1679 -1635 2304 71 0 3 chr5 31255717 31256012 -168374138 - AluSg SINE Alu -16 294 1 216 344 118 53 chr5 31256012 31256678 -168373472 + L2 LINE L2 1679 2482 -832 422 321 56 19 chr5 31256722 31256937 -168373213 + L3 LINE CR1 1254 1476 -101 258 279 96 59 chr5 31257059 31257195 -168372955 - MIR SINE MIR -109 153 13 25 0 0 0 chr5 31257424 31257449 -168372701 + AT_rich Low_complexity Low_complexity 1 25 0 1449 184 53 28 chr5 31257449 31257467 -168372683 - AluJo SINE Alu -44 268 252 2786 93 3 8 chr5 31257467 31257844 -168372306 - THE1C LTR MaLR 0 375 1 1449 184 53 28 chr5 31257844 31257989 -168372161 - AluJo SINE Alu -60 252 114 189 0 0 0 chr5 31257989 31258010 -168372140 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 1449 184 53 28 chr5 31258010 31258127 -168372023 - AluJo SINE Alu -198 114 1 186 43 0 0 chr5 31258879 31258902 -168371248 + (T)n Simple_repeat Simple_repeat 1 23 0 270 345 0 61 chr5 31258973 31259121 -168371029 + MIR3 SINE MIR 35 173 -35 2111 131 0 0 chr5 31259121 31259426 -168370724 + AluSq SINE Alu 1 305 0 933 227 9 40 chr5 31259503 31259728 -168370422 - MLT1A1 LTR MaLR 0 365 148 2403 72 0 3 chr5 31259729 31260022 -168370128 - AluY SINE Alu -19 292 1 429 167 0 94 chr5 31260022 31260118 -168370032 - MLT1A1 LTR MaLR -287 87 1 361 311 66 9 chr5 31260338 31260444 -168369706 - MIR3 SINE MIR -36 172 79 204 40 0 0 chr5 31260947 31260972 -168369178 + (TG)n Simple_repeat Simple_repeat 1 25 0 732 185 0 8 chr5 31261255 31261394 -168368756 - FLAM_A SINE Alu 0 138 1 256 279 15 0 chr5 31261397 31261465 -168368685 - MLT1J2 LTR MaLR -37 413 345 483 215 0 0 chr5 31261509 31261630 -168368520 + (CA)n Simple_repeat Simple_repeat 1 121 0 407 239 11 0 chr5 31261860 31261948 -168368202 - MLT1J2 LTR MaLR -121 329 241 276 298 12 0 chr5 31262022 31262106 -168368044 - MLT1J LTR MaLR -324 187 103 184 274 57 89 chr5 31262355 31262479 -168367671 + L2 LINE L2 2933 3052 -220 1886 163 41 24 chr5 31262557 31262926 -168367224 + THE1C LTR MaLR 1 375 0 704 252 36 104 chr5 31264007 31264051 -168366099 - L2 LINE L2 0 3313 3268 2682 50 0 0 chr5 31264051 31264354 -168365796 + AluY SINE Alu 1 303 -8 704 252 36 104 chr5 31264354 31264730 -168365420 - L2 LINE L2 -45 3268 2922 2357 109 0 3 chr5 31264946 31265257 -168364893 - AluSg SINE Alu 0 310 1 321 141 77 67 chr5 31266097 31266224 -168363926 + MER20 DNA MER1_type 5 179 -40 1805 152 34 7 chr5 31266224 31266521 -168363629 + AluJo SINE Alu 1 305 -7 321 141 77 67 chr5 31266521 31266563 -168363587 + MER20 DNA MER1_type 179 219 0 195 42 0 0 chr5 31266951 31266975 -168363175 + (TAA)n Simple_repeat Simple_repeat 2 25 0 579 245 20 26 chr5 31266981 31267132 -168363018 - MIR SINE MIR -10 252 103 2316 49 0 21 chr5 31267504 31267815 -168362335 - AluSg SINE Alu 0 305 1 602 290 96 32 chr5 31267815 31268129 -168362021 - LTR16C LTR ERVL -6 485 152 255 341 18 90 chr5 31268220 31268387 -168361763 - L2 LINE L2 -94 3178 3024 208 192 39 19 chr5 31268718 31268770 -168361380 + MIR SINE MIR 81 133 -75 475 255 31 19 chr5 31268838 31268999 -168361151 - MER5A DNA MER1_type -18 171 9 919 215 63 5 chr5 31269056 31269261 -168360889 - MER20 DNA MER1_type -2 217 1 491 302 151 0 chr5 31269281 31269440 -168360710 - MER5A DNA MER1_type -3 186 4 1523 183 70 45 chr5 31270628 31270783 -168359367 + MLT1A1 LTR MaLR 1 151 -214 2409 94 0 0 chr5 31270783 31271080 -168359070 + AluSx SINE Alu 1 297 -15 1523 183 70 45 chr5 31271080 31271280 -168358870 + MLT1A1 LTR MaLR 151 365 0 192 352 32 24 chr5 31271863 31271988 -168358162 - MIR SINE MIR -29 233 108 1774 176 0 16 chr5 31272786 31273092 -168357058 - AluJb SINE Alu -11 301 1 228 143 0 0 chr5 31273247 31273289 -168356861 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 2176 94 47 3 chr5 31273648 31273947 -168356203 - AluSx SINE Alu 0 312 1 938 224 9 85 chr5 31274419 31274750 -168355400 + L1ME1 LINE L1 5777 6082 -84 299 203 0 192 chr5 31274693 31274875 -168355275 + L1MA10 LINE L1 6185 6331 -3 * 1844 157 31 0 chr5 31275393 31275679 -168354471 - AluJb SINE Alu -17 295 1 243 103 0 0 chr5 31276231 31276270 -168353880 + (TTGTG)n Simple_repeat Simple_repeat 3 41 0 2118 131 6 10 chr5 31276275 31276588 -168353562 - AluSx SINE Alu 0 312 1 2085 141 0 3 chr5 31278014 31278312 -168351838 - AluSx SINE Alu -2 310 14 261 222 44 11 chr5 31278312 31278402 -168351748 + (TA)n Simple_repeat Simple_repeat 2 94 0 263 311 58 0 chr5 31278831 31278934 -168351216 + L3b LINE CR1 1143 1251 -332 279 0 0 0 chr5 31279449 31279480 -168350670 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 108 0 0 chr5 31279967 31280004 -168350146 + (A)n Simple_repeat Simple_repeat 1 37 0 864 308 44 15 chr5 31280339 31280751 -168349399 - L1MC4a LINE L1 -1913 5895 5472 1101 326 106 36 chr5 31280914 31281577 -168348573 + L2 LINE L2 2267 2975 -339 243 273 39 39 chr5 31281716 31281793 -168348357 + L2 LINE L2 3169 3245 -27 235 276 130 55 chr5 31281794 31282048 -168348102 - L1MC4a LINE L1 -1311 4835 4563 478 258 61 49 chr5 31282143 31282278 -168347872 - L1MC5 LINE L1 -36 7925 7793 1951 162 10 0 chr5 31282278 31282581 -168347569 - AluJb SINE Alu -6 306 1 478 258 61 49 chr5 31282581 31282679 -168347471 - L1MC5 LINE L1 -168 7793 7686 2054 89 6 85 chr5 31282679 31282995 -168347155 + AluSg SINE Alu 1 291 -19 478 258 61 49 chr5 31282995 31283024 -168347126 - L1MC5 LINE L1 -275 7686 7659 21 0 0 0 chr5 31283100 31283121 -168347029 + AT_rich Low_complexity Low_complexity 1 21 0 2278 105 3 10 chr5 31283122 31283427 -168346723 - AluSx SINE Alu -9 303 1 368 233 67 60 chr5 31283485 31283635 -168346515 - L1 LINE L1 -1731 4415 4265 227 98 73 0 chr5 31284024 31284065 -168346085 - MLT1B-int LTR MaLR -973 398 355 977 158 395 12 chr5 31284115 31284366 -168345784 - MLT1B-int LTR MaLR -1172 199 1 1302 201 105 30 chr5 31284366 31284729 -168345421 - MLT1B LTR MaLR 0 390 1 1008 247 53 19 chr5 31284745 31285065 -168345085 - MER46C DNA MER2_type -6 332 2 1091 162 0 32 chr5 31285809 31285994 -168344156 - AluSq SINE Alu -1 312 134 228 35 0 0 chr5 31285994 31286023 -168344127 + (TG)n Simple_repeat Simple_repeat 2 30 0 418 230 19 19 chr5 31286025 31286132 -168344018 - L1MC4 LINE L1 -1339 6983 1977 977 106 8 0 chr5 31286132 31286264 -168343886 - AluSq SINE Alu -179 133 1 958 239 138 52 chr5 31287176 31287640 -168342510 - MLT1D LTR MaLR -1 504 1 189 74 0 0 chr5 31287657 31287684 -168342466 + (ATG)n Simple_repeat Simple_repeat 1 27 0 4528 139 239 92 chr5 31287791 31289270 -168340880 - pTR5 LTR ERV1 0 2438 743 2435 96 0 0 chr5 31289983 31290284 -168339866 - AluSg SINE Alu -9 301 1 383 324 35 18 chr5 31290530 31290715 -168339435 + MIR SINE MIR 30 212 -50 2198 106 33 3 chr5 31290863 31291164 -168338986 + AluSx SINE Alu 1 310 -2 184 30 61 0 chr5 31291520 31291553 -168338597 + T-rich Low_complexity Low_complexity 2 36 0 465 28 0 83 chr5 31291554 31291588 -168338562 - MER41B LTR ERV1 -90 545 518 2402 107 0 0 chr5 31291588 31291897 -168338253 + AluSx SINE Alu 1 309 -3 465 28 0 83 chr5 31291897 31291934 -168338216 - MER41B LTR ERV1 -117 518 480 819 242 51 57 chr5 31292039 31292374 -168337776 + MER96B DNA MER1_type? 49 381 -36 234 91 0 0 chr5 31292959 31292992 -168337158 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 1641 145 30 34 chr5 31293050 31293347 -168336803 - AluJo SINE Alu -16 296 1 398 226 49 85 chr5 31293871 31293926 -168336224 - L1ME4a LINE L1 -4 6117 6062 2313 119 0 0 chr5 31293926 31294236 -168335914 + AluSx SINE Alu 1 310 -2 398 226 49 85 chr5 31294236 31294344 -168335806 - L1ME4a LINE L1 -59 6062 5960 2210 84 14 20 chr5 31294620 31294938 -168335212 - AluSc SINE Alu 0 309 1 2581 45 3 10 chr5 31295048 31295357 -168334793 + AluY SINE Alu 1 307 -4 535 262 41 77 chr5 31295371 31295592 -168334558 - MIR SINE MIR -21 241 29 197 314 57 138 chr5 31295777 31296073 -168334077 - L2 LINE L2 -1 3271 3000 927 110 0 0 chr5 31296199 31296317 -168333833 + AluJb SINE Alu 1 118 -194 1421 121 138 104 chr5 31296326 31296624 -168333526 - AluSg SINE Alu -2 308 1 265 359 8 26 chr5 31297319 31297436 -168332714 - MIR SINE MIR -85 177 63 440 272 9 9 chr5 31297479 31297593 -168332557 - MER81 DNA DNA 0 114 1 201 314 0 0 chr5 31297840 31297891 -168332259 + L2 LINE L2 3262 3312 -1 1697 175 21 7 chr5 31297941 31298227 -168331923 - AluSx SINE Alu -22 290 1 329 333 115 16 chr5 31298917 31299100 -168331050 - MIR SINE MIR -15 247 47 190 213 0 64 chr5 31299139 31299186 -168330964 - MIR3 SINE MIR -34 174 131 3476 55 7 0 chr5 31299950 31300387 -168329763 + L1PA8 LINE L1 5732 6171 -1 464 86 14 0 chr5 31300648 31300718 -168329432 + (TC)n Simple_repeat Simple_repeat 1 71 0 1769 199 24 0 chr5 31300750 31301047 -168329103 - AluJb SINE Alu -8 304 1 326 316 80 38 chr5 31301050 31301338 -168328812 - L1ME4a LINE L1 -117 6004 5705 2170 128 0 0 chr5 31301613 31301901 -168328249 + AluSx SINE Alu 1 288 -24 276 53 0 0 chr5 31301910 31301948 -168328202 + (CA)n Simple_repeat Simple_repeat 2 39 0 185 304 152 0 chr5 31302194 31302273 -168327877 - MIR SINE MIR -6 256 166 2151 116 0 7 chr5 31302488 31302782 -168327368 + AluSx SINE Alu 1 292 -20 479 268 31 16 chr5 31302784 31302911 -168327239 + L2 LINE L2 3185 3313 0 2411 89 0 0 chr5 31303284 31303575 -168326575 + AluSc SINE Alu 1 291 -18 1041 208 78 93 chr5 31303611 31303768 -168326382 + MLT1B LTR MaLR 1 159 -269 2118 43 0 4 chr5 31303768 31304012 -168326138 + L1PA5 LINE L1 5893 6137 -17 192 111 0 0 chr5 31304012 31304048 -168326102 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 2118 43 0 4 chr5 31304048 31304059 -168326091 + L1PA5 LINE L1 6137 6147 -7 1041 208 78 93 chr5 31304059 31304294 -168325856 + MLT1B LTR MaLR 159 428 0 1871 146 17 3 chr5 31304351 31304638 -168325512 - AluJo SINE Alu -21 291 1 293 270 157 0 chr5 31305323 31305412 -168324738 - MER91C DNA MER1_type -2 138 36 2426 97 0 0 chr5 31305587 31305896 -168324254 - AluSg SINE Alu -1 309 1 1608 150 26 11 chr5 31305947 31306214 -168323936 + AluJo SINE Alu 33 303 -9 2325 105 0 0 chr5 31306384 31306678 -168323472 + AluSx SINE Alu 1 294 -18 660 254 35 69 chr5 31307121 31307246 -168322904 + MIR SINE MIR 22 137 -125 2353 97 7 0 chr5 31307246 31307544 -168322606 + AluSq SINE Alu 1 300 -13 660 254 35 69 chr5 31307544 31307650 -168322500 + MIR SINE MIR 137 245 -17 383 243 59 66 chr5 31308258 31308410 -168321740 + MIR3 SINE MIR 4 154 -54 701 251 78 139 chr5 31308895 31309450 -168320700 - MLT1H1 LTR MaLR -2 553 33 315 285 146 0 chr5 31309694 31309817 -168320333 + MER117 DNA MER1_type 27 167 -30 1134 170 55 0 chr5 31310169 31310369 -168319781 + MSTB1 LTR MaLR 1 211 -221 1281 117 6 0 chr5 31310369 31310549 -168319601 - AluSx SINE Alu -131 181 1 1147 134 6 0 chr5 31310550 31310721 -168319429 + MSTB1 LTR MaLR 259 430 -2 2264 94 0 3 chr5 31311479 31311788 -168318362 + AluY SINE Alu 1 308 -3 2045 176 43 92 chr5 31312955 31313222 -168316928 - MER74A LTR ERVL 0 558 334 2056 117 0 0 chr5 31313222 31313520 -168316630 + AluSx SINE Alu 1 298 -14 2045 176 43 92 chr5 31313520 31313837 -168316313 - MER74A LTR ERVL -224 334 3 203 288 27 41 chr5 31314030 31314103 -168316047 - L2 LINE L2 -89 3183 3112 2136 138 7 54 chr5 31315119 31315395 -168314755 - MLT1B LTR MaLR -4 386 133 2116 115 3 0 chr5 31315395 31315699 -168314451 - AluY SINE Alu -6 305 1 2136 138 7 54 chr5 31315699 31315827 -168314323 - MLT1B LTR MaLR -257 133 1 263 343 46 0 chr5 31316458 31316566 -168313584 - L2 LINE L2 -2 3270 3158 350 244 193 0 chr5 31316568 31316687 -168313463 - LTR67 LTR ERVL -2 555 414 254 208 28 28 chr5 31316858 31316930 -168313220 - MLT1J LTR MaLR -330 181 110 * 656 258 36 18 chr5 31316871 31317038 -168313112 - LTR67 LTR ERVL -385 172 3 3675 130 36 34 chr5 31317143 31317782 -168312368 - MER39B LTR ERV1 -13 640 1 251 138 15 77 chr5 31317820 31317885 -168312265 - L2 LINE L2 -218 3054 2994 189 0 0 0 chr5 31318216 31318237 -168311913 + (T)n Simple_repeat Simple_repeat 1 21 0 564 276 232 28 chr5 31318577 31319085 -168311065 + L2 LINE L2 2366 2977 -337 2104 112 7 0 chr5 31319385 31319689 -168310461 - AluSx SINE Alu -6 306 1 2250 77 0 0 chr5 31320302 31320620 -168309530 - AluSq SINE Alu 0 318 1 2413 72 3 0 chr5 31321023 31321328 -168308822 + AluSp SINE Alu 1 306 -7 2189 103 0 22 chr5 31321750 31322061 -168308089 + AluSp SINE Alu 1 304 -9 319 287 96 30 chr5 31322709 31322876 -168307274 + MIR3 SINE MIR 4 181 -27 2102 116 0 0 chr5 31322949 31323241 -168306909 + AluSq SINE Alu 1 292 -21 2284 150 57 15 chr5 31323508 31323915 -168306235 - MSTA LTR MaLR 0 428 5 2137 74 30 10 chr5 31324127 31324424 -168305726 + AluSq SINE Alu 1 303 -10 2232 76 3 7 chr5 31324424 31324727 -168305423 + AluY SINE Alu 1 302 -9 687 148 83 134 chr5 31324820 31325036 -168305114 - MER20 DNA MER1_type -14 205 1 810 139 7 40 chr5 31325550 31325723 -168304427 - AluSg/x SINE Alu 0 302 135 2318 74 23 0 chr5 31325805 31326104 -168304046 - AluSq SINE Alu -7 306 1 392 336 32 23 chr5 31326117 31326292 -168303858 - MIR SINE MIR -63 145 16 2112 103 0 0 chr5 31326521 31326835 -168303315 - AluSx SINE Alu 0 314 1 464 0 18 0 chr5 31327262 31327318 -168302832 + (TG)n Simple_repeat Simple_repeat 2 58 0 2582 175 56 62 chr5 31328034 31328652 -168301498 - L1MB5 LINE L1 0 6174 5556 434 358 16 21 chr5 31328688 31328875 -168301275 - L3 LINE CR1 -2 1575 1390 2147 121 0 0 chr5 31329431 31329736 -168300414 - AluSx SINE Alu -7 305 1 277 122 20 0 chr5 31329755 31329804 -168300346 - L1ME3A LINE L1 -5 6165 6116 * 654 229 51 11 chr5 31329785 31329960 -168300190 + L1ME3A LINE L1 5878 6059 -111 715 269 164 21 chr5 31330126 31330412 -168299738 + MLT1K LTR MaLR 77 403 -185 3940 187 50 50 chr5 31330488 31331020 -168299130 - MER21B LTR ERV1 -14 849 315 2164 111 3 0 chr5 31331020 31331326 -168298824 - AluSx SINE Alu -5 307 1 3940 187 50 50 chr5 31331326 31331642 -168298508 - MER21B LTR ERV1 -547 316 1 1079 79 0 7 chr5 31332224 31332364 -168297786 + AluSq/x SINE Alu 1 139 -173 2196 96 0 3 chr5 31332374 31332677 -168297473 + AluSc SINE Alu 3 304 -5 2443 130 61 30 chr5 31333416 31333823 -168296327 + MSTB LTR MaLR 5 424 -2 2504 46 7 0 chr5 31333887 31334193 -168295957 - AluY SINE Alu -3 308 1 606 279 34 17 chr5 31334529 31334708 -168295442 - MIR SINE MIR 0 262 81 231 36 0 0 chr5 31335434 31335462 -168294688 + (AAATG)n Simple_repeat Simple_repeat 3 30 0 2129 108 0 0 chr5 31335612 31335907 -168294243 - AluSx SINE Alu -17 295 1 489 301 72 28 chr5 31335923 31336247 -168293903 + L1ME4a LINE L1 5543 5886 -235 8203 113 22 17 chr5 31336247 31336952 -168293198 - HSMAR2 DNA Mariner -1 1301 586 2480 57 0 16 chr5 31336952 31337268 -168292882 + AluY SINE Alu 1 311 0 8203 113 22 17 chr5 31337268 31337857 -168292293 - HSMAR2 DNA Mariner -716 586 1 489 301 72 28 chr5 31337857 31337891 -168292259 + L1ME4a LINE L1 5886 5917 -204 252 0 0 0 chr5 31337906 31337934 -168292216 + (CA)n Simple_repeat Simple_repeat 2 29 0 332 253 40 10 chr5 31337968 31338067 -168292083 + HAL1b LINE L1 1243 1344 -4 21 0 0 0 chr5 31338073 31338094 -168292056 + AT_rich Low_complexity Low_complexity 1 21 0 252 245 104 28 chr5 31338242 31338348 -168291802 + MIR SINE MIR 19 132 -130 506 262 33 86 chr5 31339296 31339540 -168290610 + MIR SINE MIR 11 241 -21 1736 134 62 7 chr5 31339885 31340175 -168289975 - AluJb SINE Alu -6 306 1 208 294 0 0 chr5 31340389 31340440 -168289710 + (TCCA)n Simple_repeat Simple_repeat 2 52 0 2202 70 0 11 chr5 31341506 31341830 -168288320 + AluY SINE Alu 1 321 0 463 220 0 11 chr5 31342072 31342163 -168287987 + L2 LINE L2 3224 3313 0 392 304 51 0 chr5 31343049 31343187 -168286963 + MER117 DNA MER1_type 53 197 0 239 224 141 0 chr5 31343261 31343346 -168286804 + MER94 DNA DNA 4 100 -34 1191 187 20 103 chr5 31343489 31343612 -168286538 - MER39 LTR ERV1 -3 704 572 2078 91 7 7 chr5 31343612 31343899 -168286251 + AluSg SINE Alu 2 288 -22 1191 187 20 103 chr5 31343899 31344154 -168285996 - MER39 LTR ERV1 -135 572 322 391 217 85 47 chr5 31344997 31345126 -168285024 + MIR SINE MIR 16 149 -59 2253 91 0 0 chr5 31346140 31346438 -168283712 - AluSg SINE Alu -12 298 1 772 255 119 118 chr5 31347095 31347677 -168282473 - L2 LINE L2 -1 3312 2711 2070 114 7 0 chr5 31347677 31347974 -168282176 + AluSq SINE Alu 1 299 -14 772 255 119 118 chr5 31347974 31348264 -168281886 - L2 LINE L2 -602 2711 2423 1568 154 0 97 chr5 31348786 31348983 -168281167 - AluJo SINE Alu -7 305 151 2112 117 3 0 chr5 31348983 31349292 -168280858 + AluSq SINE Alu 1 310 -3 1568 154 0 97 chr5 31349292 31349425 -168280725 - AluJo SINE Alu -161 151 7 187 311 16 0 chr5 31349681 31349742 -168280408 + L2 LINE L2 3247 3308 -5 309 253 85 117 chr5 31349893 31350090 -168280060 - Charlie8 DNA MER1_type -2036 381 195 1476 142 13 4 chr5 31350090 31350354 -168279796 + AluSx SINE Alu 54 319 0 309 253 85 117 chr5 31350354 31350471 -168279679 - Charlie8 DNA MER1_type -2222 195 76 390 383 6 23 chr5 31351375 31351550 -168278600 + MIR3 SINE MIR 14 185 -23 215 340 0 0 chr5 31353044 31353097 -168277053 + L2 LINE L2 3162 3214 -58 1668 172 3 16 chr5 31353718 31354026 -168276124 + AluJo SINE Alu 1 304 -8 2245 80 0 3 chr5 31354026 31354325 -168275825 + AluY SINE Alu 1 298 -13 224 333 123 0 chr5 31354878 31354992 -168275158 + L2 LINE L2 3145 3272 0 2052 92 23 33 chr5 31356258 31356562 -168273588 - AluSx SINE Alu -11 301 1 183 273 146 0 chr5 31356964 31357019 -168273131 - L2 LINE L2 -37 3276 3214 328 250 111 9 chr5 31357247 31357355 -168272795 + L2 LINE L2 3189 3307 -6 1901 144 3 7 chr5 31357357 31357662 -168272488 + AluSx SINE Alu 1 304 -8 2465 121 68 34 chr5 31358222 31358296 -168271854 - MSTA LTR MaLR 0 428 358 2093 125 0 0 chr5 31358296 31358593 -168271557 + AluSx SINE Alu 1 297 -15 2465 121 68 34 chr5 31358593 31358932 -168271218 - MSTA LTR MaLR -70 358 1 1084 436 21 14 chr5 31358990 31359298 -168270852 - AluSp SINE Alu 0 311 2 551 261 56 0 chr5 31360320 31360481 -168269669 + L1M3d LINE L1 3 172 -5719 21 0 0 0 chr5 31360579 31360600 -168269550 + AT_rich Low_complexity Low_complexity 1 21 0 2240 123 0 0 chr5 31361530 31361831 -168268319 + AluSx SINE Alu 1 301 -11 1980 157 0 26 chr5 31362624 31362936 -168267214 + AluJb SINE Alu 1 304 -8 1718 171 0 38 chr5 31363111 31363426 -168266724 - AluJb SINE Alu -9 303 1 2147 98 17 7 chr5 31363467 31363762 -168266388 - AluSq SINE Alu -15 298 1 2295 99 0 10 chr5 31363762 31364066 -168266084 - AluSx SINE Alu -11 301 1 181 242 22 77 chr5 31364292 31364383 -168265767 + MER5C DNA MER1_type 174 259 -65 2344 101 3 3 chr5 31365095 31365393 -168264757 + AluSg SINE Alu 1 298 -12 269 290 140 11 chr5 31368544 31368637 -168261513 + MIR3 SINE MIR 58 162 -46 2874 138 74 8 chr5 31368790 31369304 -168260846 + LTR10A LTR ERV1 8 555 -54 1854 149 3 40 chr5 31370093 31370389 -168259761 + AluSx SINE Alu 4 288 -24 401 290 85 25 chr5 31370448 31370639 -168259511 + MIR SINE MIR 6 215 -47 332 259 104 94 chr5 31371098 31371165 -168258985 - L1ME4a LINE L1 -11 6110 6045 2220 115 0 16 chr5 31371165 31371477 -168258673 + AluSq SINE Alu 1 307 -6 332 259 104 94 chr5 31371477 31371610 -168258540 - L1ME4a LINE L1 -76 6045 5908 712 232 57 31 chr5 31371613 31371807 -168258343 + MER63A DNA MER1_type 4 202 -8 378 0 0 0 chr5 31372398 31372440 -168257710 + (TG)n Simple_repeat Simple_repeat 2 43 0 321 284 25 90 chr5 31373418 31373619 -168256531 + L2 LINE L2 2457 2644 -670 858 107 23 46 chr5 31373678 31373690 -168256460 - AluSg SINE Alu -182 128 117 402 21 0 0 chr5 31373690 31373737 -168256413 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 858 107 23 46 chr5 31373737 31373855 -168256295 - AluSg SINE Alu -193 117 1 1691 136 0 45 chr5 31373855 31374170 -168255980 - AluSx SINE Alu 0 333 31 4768 131 132 99 chr5 31374170 31375988 -168254162 + pTR5 LTR ERV1 743 2438 0 249 88 0 0 chr5 31375991 31376025 -168254125 - AluSx SINE Alu -269 34 1 2586 40 7 0 chr5 31376615 31376914 -168253236 - AluY SINE Alu -10 301 1 264 354 53 35 chr5 31376918 31377031 -168253119 + L2 LINE L2 3154 3268 -4 361 269 86 30 chr5 31378074 31378271 -168251879 - MLT1L LTR MaLR -234 381 174 2336 122 0 0 chr5 31378373 31378684 -168251466 + AluSx SINE Alu 1 311 -1 741 119 23 160 chr5 31379429 31379648 -168250502 - MER53 DNA DNA 0 189 1 308 250 50 100 chr5 31379764 31379944 -168250206 + MER5A DNA MER1_type 18 188 -1 2342 111 0 0 chr5 31379949 31380255 -168249895 - AluSx SINE Alu -6 306 1 231 94 0 0 chr5 31380377 31380409 -168249741 + L2 LINE L2 3282 3313 0 2488 75 0 0 chr5 31381868 31382160 -168247990 + AluSg SINE Alu 1 292 -18 331 227 21 62 chr5 31382582 31382696 -168247454 - L1MC4 LINE L1 -1339 6983 1996 1803 164 0 7 chr5 31382696 31382982 -168247168 - AluJo SINE Alu -28 284 1 558 207 95 0 chr5 31383924 31384040 -168246110 - MIR3 SINE MIR -16 192 66 320 253 13 13 chr5 31384923 31385002 -168245148 + MIR3 SINE MIR 121 199 -9 2349 105 0 0 chr5 31385330 31385625 -168244525 + AluSq SINE Alu 1 295 -18 2326 62 7 3 chr5 31385625 31385940 -168244210 + AluY SINE Alu 1 311 0 472 246 112 27 chr5 31386256 31386656 -168243494 - MLT1J LTR MaLR -4 507 1 2113 107 38 0 chr5 31386886 31387175 -168242975 + AluSq SINE Alu 1 300 -13 2094 78 37 7 chr5 31387348 31387638 -168242512 - AluSc SINE Alu 0 298 1 2586 72 0 0 chr5 31387931 31388237 -168241913 - AluY SINE Alu -5 306 1 2521 69 3 16 chr5 31388548 31388865 -168241285 + AluSp SINE Alu 1 313 0 292 258 0 0 chr5 31389260 31389326 -168240824 - MLT1J LTR MaLR -331 180 115 419 260 10 106 chr5 31389530 31389657 -168240493 + MIR SINE MIR 3 100 -162 2120 126 7 3 chr5 31389657 31389958 -168240192 - AluSx SINE Alu -10 302 1 419 260 10 106 chr5 31389958 31390063 -168240087 + MIR SINE MIR 100 213 -49 2197 101 3 10 chr5 31390073 31390379 -168239771 - AluSx SINE Alu -8 304 1 184 294 20 0 chr5 31390391 31390442 -168239708 + MIR SINE MIR 211 262 0 567 255 50 6 chr5 31390551 31390712 -168239438 + L2 LINE L2 2849 3016 -297 2127 105 11 3 chr5 31390765 31391051 -168239099 + AluSx SINE Alu 1 288 -24 356 276 216 32 chr5 31391414 31391599 -168238551 + L2 LINE L2 3095 3313 0 2326 81 0 31 chr5 31391626 31391947 -168238203 - AluY SINE Alu 0 311 1 230 83 0 0 chr5 31391980 31392016 -168238134 - L1MA3 LINE L1 0 6305 6270 660 188 12 69 chr5 31392379 31392539 -168237611 - MER106B DNA MER1_type -908 151 1 393 286 97 7 chr5 31393889 31394043 -168236107 + L2 LINE L2 3145 3312 -1 2458 58 0 49 chr5 31394156 31394483 -168235667 - AluY SINE Alu 0 311 1 211 303 15 0 chr5 31394592 31394658 -168235492 - L2 LINE L2 -21 3251 3185 229 121 0 0 chr5 31394659 31394692 -168235458 + Alu SINE Alu 81 113 -187 1337 90 0 0 chr5 31394706 31394873 -168235277 - AluSg SINE Alu -143 167 1 200 250 0 21 chr5 31395257 31395305 -168234845 - L2 LINE L2 -8 3264 3218 191 344 31 42 chr5 31395409 31395505 -168234645 - L2 LINE L2 -191 3081 2987 2841 179 62 7 chr5 31397385 31397950 -168232200 - MER77 LTR ERV1 -9 596 1 621 285 75 11 chr5 31398093 31398360 -168231790 - LTR33 LTR ERVL -237 284 1 487 278 117 29 chr5 31398839 31399044 -168231106 + MIR SINE MIR 13 235 -27 239 288 38 12 chr5 31399361 31399441 -168230709 + MIR SINE MIR 20 101 -107 230 292 45 11 chr5 31399559 31399648 -168230502 - MIR SINE MIR -86 122 31 1877 203 48 67 chr5 31399823 31399881 -168230269 - MER74B LTR ERVL 0 622 564 2604 53 0 0 chr5 31399881 31400184 -168229966 + AluY SINE Alu 1 303 -8 1877 203 48 67 chr5 31400184 31400325 -168229825 - MER74B LTR ERVL -58 564 422 1594 184 0 24 chr5 31400325 31400641 -168229509 - AluJo SINE Alu 0 313 5 1877 203 48 67 chr5 31400641 31401000 -168229150 - MER74B LTR ERVL -200 422 71 1899 162 0 22 chr5 31401000 31401314 -168228836 + AluJo SINE Alu 5 311 -1 366 267 38 29 chr5 31401785 31401890 -168228260 - MIR SINE MIR -153 109 4 1832 141 0 42 chr5 31402154 31402467 -168227683 + AluSx SINE Alu 1 300 -12 1877 174 140 17 chr5 31402925 31403339 -168226811 + MLT1C LTR MaLR 1 465 -2 2470 97 0 3 chr5 31404179 31404487 -168225663 - AluSq SINE Alu -6 307 1 223 294 59 24 chr5 31404623 31404708 -168225442 + MIR SINE MIR 156 243 -19 320 363 44 25 chr5 31405762 31405922 -168224228 - MIR3 SINE MIR -27 181 19 2304 104 3 10 chr5 31405946 31406255 -168223895 + AluSx SINE Alu 1 307 -5 2391 74 0 37 chr5 31407493 31407816 -168222334 - AluY SINE Alu 0 311 1 1486 144 32 36 chr5 31408222 31408500 -168221650 - AluSx SINE Alu -18 294 18 2223 113 0 0 chr5 31408922 31409253 -168220897 + AluSx SINE Alu 1 331 0 476 279 8 0 chr5 31409516 31409645 -168220505 + Charlie7 DNA MER1_type 116 245 -2367 830 183 0 0 chr5 31409686 31409817 -168220333 - AluJo SINE Alu -45 267 137 1912 247 84 52 chr5 31409849 31409959 -168220191 + Charlie7 DNA MER1_type 307 412 -2200 735 176 0 22 chr5 31409959 31410095 -168220055 - AluJo SINE Alu -169 133 1 1912 247 84 52 chr5 31410095 31410383 -168219767 + Charlie7 DNA MER1_type 412 689 -1923 2650 55 0 0 chr5 31410383 31410690 -168219460 + AluY SINE Alu 1 307 -4 1912 247 84 52 chr5 31410690 31411100 -168219050 + Charlie7 DNA MER1_type 689 1142 -1470 801 153 0 0 chr5 31411100 31411218 -168218932 + AluJb SINE Alu 1 118 -194 22 35 0 0 chr5 31411231 31411260 -168218890 + AT_rich Low_complexity Low_complexity 1 29 0 2202 228 94 75 chr5 31411263 31411483 -168218667 + Charlie7 DNA MER1_type 1128 1343 -1269 5014 131 65 43 chr5 31411483 31411766 -168218384 - MER4D LTR ERV1 0 903 628 1864 126 24 0 chr5 31411766 31412059 -168218091 + AluSx SINE Alu 12 311 -1 5014 131 65 43 chr5 31412059 31412175 -168217975 - MER4D LTR ERV1 -275 628 516 2177 118 0 6 chr5 31412175 31412488 -168217662 + AluSq SINE Alu 1 311 -2 5014 131 65 43 chr5 31412488 31412971 -168217179 - MER4D LTR ERV1 -387 516 1 2202 228 94 75 chr5 31412971 31413221 -168216929 + Charlie7 DNA MER1_type 1343 1587 -1025 2482 54 0 0 chr5 31413221 31413517 -168216633 + AluY SINE Alu 1 296 -15 2202 228 94 75 chr5 31413517 31414116 -168216034 + Charlie7 DNA MER1_type 1587 2174 -438 2367 60 0 10 chr5 31414116 31414417 -168215733 + AluY SINE Alu 1 298 -13 2202 228 94 75 chr5 31414417 31414428 -168215722 + Charlie7 DNA MER1_type 2174 2183 -429 1983 130 3 0 chr5 31414428 31414720 -168215430 + AluSx SINE Alu 3 295 -17 2202 228 94 75 chr5 31414720 31414843 -168215307 + Charlie7 DNA MER1_type 2183 2356 -256 204 97 0 0 chr5 31414860 31414891 -168215259 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 1855 150 0 0 chr5 31414891 31415178 -168214972 - AluSx SINE Alu -25 287 1 1848 154 0 7 chr5 31415180 31415486 -168214664 - AluJb SINE Alu -8 304 1 730 284 52 55 chr5 31416354 31416589 -168213561 - L1MC4a LINE L1 -1876 5932 5697 2147 123 0 0 chr5 31416589 31416891 -168213259 + AluSx SINE Alu 1 302 -10 730 284 52 55 chr5 31416891 31417095 -168213055 - L1MC4a LINE L1 -2111 5697 5494 1987 148 75 0 chr5 31417285 31417617 -168212533 - LTR45B LTR ERV1 -131 358 2 31 26 0 0 chr5 31417742 31417780 -168212370 + AT_rich Low_complexity Low_complexity 1 38 0 549 31 0 0 chr5 31417780 31417844 -168212306 - U6 snRNA snRNA -31 76 13 322 228 186 80 chr5 31417893 31418205 -168211945 - L1ME LINE L1 -467 5654 5310 33 25 0 0 chr5 31418444 31418484 -168211666 + AT_rich Low_complexity Low_complexity 1 40 0 2343 76 0 0 chr5 31418602 31418893 -168211257 - AluSc SINE Alu -18 291 1 4032 67 13 4 chr5 31418897 31419432 -168210718 - L1PA8 LINE L1 -4 6168 5629 1073 137 33 11 chr5 31419483 31419665 -168210485 - AluJb SINE Alu -7 305 120 252 0 0 0 chr5 31420367 31420395 -168209755 + (A)n Simple_repeat Simple_repeat 1 28 0 1873 127 3 13 chr5 31420408 31420707 -168209443 + AluSg SINE Alu 12 307 -3 551 230 26 0 chr5 31420808 31420921 -168209229 + MLT1E3 LTR MaLR 317 432 -192 2060 187 104 6 chr5 31420921 31421391 -168208759 - MER34 LTR ERV1 0 542 27 651 185 196 35 chr5 31421396 31421569 -168208581 + MLT1E3 LTR MaLR 424 624 0 599 184 0 0 chr5 31421792 31421895 -168208255 + U13 snRNA snRNA 1 103 -1 234 196 22 0 chr5 31421941 31421987 -168208163 + MIR SINE MIR 103 149 -113 344 253 22 0 chr5 31422069 31422160 -168207990 + MIR SINE MIR 164 256 -6 211 352 11 0 chr5 31422969 31423057 -168207093 - MIR SINE MIR 0 262 174 2189 104 0 10 chr5 31423601 31423900 -168206250 + AluSx SINE Alu 1 296 -16 523 267 95 25 chr5 31423994 31424178 -168205972 - MIR SINE MIR -68 140 2 274 333 34 8 chr5 31424401 31424518 -168205632 - L2 LINE L2 0 3313 3194 2250 113 3 0 chr5 31424621 31424932 -168205218 + AluSx SINE Alu 1 312 0 3339 196 104 6 chr5 31424935 31425701 -168204449 - L1MB8 LINE L1 0 6178 5316 1417 194 3 45 chr5 31425701 31426011 -168204139 - AluJo SINE Alu -15 297 1 3339 196 104 6 chr5 31426011 31426121 -168204029 - L1MB8 LINE L1 -862 5316 5218 931 265 31 14 chr5 31426118 31426341 -168203809 - L1M4 LINE L1 -6039 503 277 * 544 209 0 0 chr5 31426343 31426453 -168203697 - L1M4 LINE L1 -6409 133 24 287 313 78 39 chr5 31426483 31426544 -168203606 - L1ME3A LINE L1 -5 6165 6108 1843 116 46 3 chr5 31426544 31426828 -168203322 - AluSx SINE Alu -16 296 1 287 313 78 39 chr5 31426828 31426945 -168203205 - L1ME3A LINE L1 -62 6108 5980 1905 141 20 3 chr5 31426982 31427280 -168202870 + AluSx SINE Alu 1 303 -9 2408 42 0 36 chr5 31427380 31427687 -168202463 - AluY SINE Alu -15 296 1 22 56 0 0 chr5 31427711 31427747 -168202403 + AT_rich Low_complexity Low_complexity 1 36 0 1013 76 8 0 chr5 31428413 31428545 -168201605 + AluSc SINE Alu 1 133 -176 2269 78 7 13 chr5 31428545 31428678 -168201472 + AluSc SINE Alu 1 133 -176 2336 77 0 3 chr5 31428678 31428976 -168201174 + AluSc SINE Alu 1 297 -12 2269 78 7 13 chr5 31428976 31429149 -168201001 + AluSc SINE Alu 133 305 -4 820 148 0 0 chr5 31429263 31429391 -168200759 - FLAM_C SINE Alu -2 141 14 1204 200 17 4 chr5 31429396 31429626 -168200524 + L1MB3 LINE L1 5912 6144 -39 533 122 0 0 chr5 31429650 31429724 -168200426 + U6 snRNA snRNA 1 74 -33 2101 93 0 3 chr5 31429744 31430035 -168200115 + AluSx SINE Alu 1 290 -22 319 73 0 0 chr5 31430035 31430081 -168200069 + L1MB4 LINE L1 6131 6179 -1 1851 168 3 0 chr5 31430398 31430707 -168199443 + AluJb SINE Alu 1 310 -2 581 105 0 0 chr5 31430707 31430783 -168199367 - AluY SINE Alu -223 88 13 649 117 0 0 chr5 31430783 31430877 -168199273 + AluSg/x SINE Alu 216 309 0 1468 66 0 0 chr5 31431919 31432100 -168198050 + L1PA5 LINE L1 5966 6146 -8 189 132 0 0 chr5 31432100 31432138 -168198012 + (TA)n Simple_repeat Simple_repeat 1 38 0 2143 95 10 0 chr5 31432549 31432843 -168197307 + AluSq SINE Alu 1 297 -16 270 290 48 0 chr5 31433011 31433073 -168197077 + L2 LINE L2 3202 3266 -6 1932 127 13 20 chr5 31433441 31433741 -168196409 - AluSx SINE Alu -14 298 1 1913 130 10 10 chr5 31433950 31434288 -168195862 + AluSx SINE Alu 1 312 0 215 360 64 0 chr5 31434441 31434566 -168195584 - MIR3 SINE MIR -38 170 38 2108 111 0 7 chr5 31434654 31434951 -168195199 + AluSx SINE Alu 1 295 -17 833 192 0 29 chr5 31434951 31435123 -168195027 + AluJb SINE Alu 134 300 -12 30 0 0 0 chr5 31435252 31435282 -168194868 + AT_rich Low_complexity Low_complexity 1 30 0 1778 128 0 0 chr5 31435317 31435568 -168194582 - AluSq SINE Alu -58 255 5 230 260 0 52 chr5 31436789 31436885 -168193265 - AluYb8 SINE Alu -96 212 122 22 0 0 0 chr5 31438886 31438908 -168191242 + AT_rich Low_complexity Low_complexity 1 22 0 331 202 4 130 chr5 31439350 31439603 -168190547 - AluSg SINE Alu -19 281 61 855 142 32 53 chr5 31439992 31440182 -168189968 + MER53 DNA DNA 3 188 -1 1828 113 28 7 chr5 31440439 31440472 -168189678 - AluSg SINE Alu -20 290 259 207 0 0 0 chr5 31440472 31440495 -168189655 + (GGCTG)n Simple_repeat Simple_repeat 5 27 0 1828 113 28 7 chr5 31440495 31440745 -168189405 - AluSg SINE Alu -51 259 1 2268 102 3 0 chr5 31441107 31441411 -168188739 - AluSq SINE Alu -8 305 1 1664 128 17 31 chr5 31441817 31442106 -168188044 - AluSx SINE Alu -10 302 18 2082 113 0 0 chr5 31442542 31442873 -168187277 + AluSx SINE Alu 1 331 0 389 221 11 11 chr5 31443332 31443427 -168186723 - MLT1L LTR MaLR -18 597 503 475 234 40 0 chr5 31444181 31444305 -168185845 + HAL1 LINE L1 109 237 -2270 387 268 118 7 chr5 31444447 31444600 -168185550 + HAL1 LINE L1 480 649 -1858 189 284 14 27 chr5 31444689 31444763 -168185387 + MER5B DNA MER1_type 1 73 -105 264 239 0 70 chr5 31444778 31444849 -168185301 - L2 LINE L2 0 3313 3248 1065 213 71 58 chr5 31444911 31445306 -168184844 + HAL1 LINE L1 791 1190 -1317 1029 232 29 8 chr5 31445306 31445547 -168184603 - LTR8 LTR ERV1 0 691 446 1307 167 27 68 chr5 31446174 31446287 -168183863 + AluJb SINE Alu 1 117 -199 2501 113 16 11 chr5 31446287 31446658 -168183492 + THE1C LTR MaLR 1 373 -2 1307 167 27 68 chr5 31446658 31446872 -168183278 + AluJb SINE Alu 117 316 0 504 32 0 0 chr5 31447006 31447068 -168183082 + (TA)n Simple_repeat Simple_repeat 1 62 0 243 61 0 0 chr5 31447819 31447852 -168182298 + (CA)n Simple_repeat Simple_repeat 2 34 0 534 255 32 83 chr5 31447899 31448003 -168182147 + MIR SINE MIR 56 164 -98 2108 106 3 0 chr5 31448003 31448296 -168181854 + AluSc SINE Alu 1 294 -15 2263 99 0 0 chr5 31448301 31448595 -168181555 + AluSg SINE Alu 1 294 -16 534 255 32 83 chr5 31448595 31448700 -168181450 + MIR SINE MIR 168 260 -2 286 280 56 17 chr5 31448896 31449039 -168181111 - MIR SINE MIR -61 201 16 189 234 0 43 chr5 31449164 31449211 -168180939 + MIR3 SINE MIR 12 56 -152 2149 100 10 3 chr5 31449482 31449791 -168180359 - AluSq SINE Alu -2 311 1 1999 121 7 7 chr5 31449872 31450177 -168179973 - AluSx SINE Alu -7 305 1 351 208 104 10 chr5 31451172 31451268 -168178882 - MER53 DNA DNA -80 109 5 285 202 139 116 chr5 31451683 31451812 -168178338 - MER20 DNA MER1_type -87 132 1 202 393 0 11 chr5 31451888 31451977 -168178173 - MIR SINE MIR -85 123 36 575 247 68 36 chr5 31452231 31452482 -168177668 + MIR SINE MIR 1 259 -3 2272 78 0 3 chr5 31452751 31453045 -168177105 - AluSx SINE Alu -19 293 1 186 339 0 0 chr5 31453129 31453185 -168176965 - L2 LINE L2 0 3272 3217 2266 80 13 0 chr5 31455077 31455376 -168174774 + AluSx SINE Alu 1 303 -9 2294 66 0 0 chr5 31455378 31455665 -168174485 + AluY SINE Alu 1 287 -24 810 288 83 17 chr5 31455839 31456079 -168174071 + MIR SINE MIR 7 262 0 320 263 20 72 chr5 31456142 31456172 -168173978 - L1MC4 LINE L1 -1320 6722 6692 2029 108 0 0 chr5 31456172 31456449 -168173701 + AluSx SINE Alu 1 277 -35 180 0 0 0 chr5 31456450 31456470 -168173680 + (TC)n Simple_repeat Simple_repeat 1 20 0 1101 126 0 0 chr5 31456470 31456645 -168173505 + (TA)n Simple_repeat Simple_repeat 2 176 0 320 263 20 72 chr5 31456645 31456763 -168173387 - L1MC4 LINE L1 -1348 6694 6615 * 408 253 23 0 chr5 31456687 31456774 -168173376 + L1MC4 LINE L1 6615 6703 -1339 349 258 77 0 chr5 31456776 31456884 -168173266 + L1MC4 LINE L1 6571 6652 -1133 916 295 26 49 chr5 31457147 31457242 -168172908 - L3b LINE CR1 -138 1445 1349 2197 102 0 0 chr5 31457242 31457546 -168172604 - AluY SINE Alu -7 304 1 916 295 26 49 chr5 31457546 31457799 -168172351 - L3b LINE CR1 -234 1349 1105 2039 123 0 0 chr5 31458469 31458762 -168171388 - AluSg SINE Alu -14 296 4 1947 132 0 16 chr5 31458879 31459189 -168170961 - AluSx SINE Alu 0 312 8 2154 111 0 0 chr5 31459209 31459507 -168170643 - AluSx SINE Alu -14 298 1 252 0 0 0 chr5 31463519 31463547 -168166603 + (TA)n Simple_repeat Simple_repeat 1 28 0 393 162 0 140 chr5 31463549 31463626 -168166524 - HAL1 LINE L1 -33 2474 2422 763 178 0 22 chr5 31463626 31463761 -168166389 - FLAM_C SINE Alu -1 132 1 393 162 0 140 chr5 31463761 31463819 -168166331 - HAL1 LINE L1 -85 2422 2358 755 294 68 4 chr5 31463851 31464099 -168166051 - HAL1 LINE L1 -604 1903 1640 878 245 68 45 chr5 31464100 31464410 -168165740 - HAL1 LINE L1 -900 1607 1291 2037 125 10 0 chr5 31464432 31464736 -168165414 - AluSx SINE Alu -5 307 1 1039 83 0 0 chr5 31464740 31464873 -168165277 - AluSq/x SINE Alu -179 133 1 1148 220 62 70 chr5 31464905 31464977 -168165173 - HAL1 LINE L1 -1253 1254 1183 2286 141 155 124 chr5 31464977 31465342 -168164808 + LTR8A LTR ERV1 3 355 -372 1878 131 14 0 chr5 31465342 31465625 -168164525 - AluSx SINE Alu -25 287 1 2286 141 155 124 chr5 31465625 31465962 -168164188 + LTR8A LTR ERV1 355 727 0 1148 220 62 70 chr5 31465962 31466357 -168163793 - HAL1 LINE L1 -1324 1183 791 264 239 0 70 chr5 31466419 31466490 -168163660 + L2 LINE L2 3248 3313 0 190 246 16 33 chr5 31466505 31466566 -168163584 - MER5B DNA MER1_type -105 73 14 235 231 92 110 chr5 31466684 31466857 -168163293 - HAL1 LINE L1 -1858 649 480 1999 117 3 32 chr5 31467151 31467325 -168162825 - AluSx SINE Alu -5 307 144 1914 104 3 60 chr5 31467325 31467641 -168162509 - AluSg SINE Alu -12 298 1 1999 117 3 32 chr5 31467641 31467782 -168162368 - AluSx SINE Alu -168 144 1 1235 220 124 41 chr5 31468588 31469025 -168161125 + LTR33 LTR ERVL 47 519 -2 2050 107 21 0 chr5 31469121 31469411 -168160739 - AluSq SINE Alu -17 296 1 2472 52 3 0 chr5 31469437 31469744 -168160406 - AluY SINE Alu -3 308 1 1678 161 3 10 chr5 31469897 31470196 -168159954 - AluJo SINE Alu -2 310 14 2379 65 7 0 chr5 31470219 31470528 -168159622 - AluY SINE Alu 0 311 1 1573 192 16 0 chr5 31470589 31470896 -168159254 - AluJb SINE Alu 0 312 1 214 273 36 0 chr5 31471396 31471451 -168158699 - L2 LINE L2 -1 3271 3215 274 335 99 7 chr5 31471496 31471648 -168158502 - MIR3 SINE MIR -6 202 37 213 154 0 0 chr5 31472482 31472521 -168157629 + (CGGGG)n Simple_repeat Simple_repeat 1 39 0 218 217 0 0 chr5 31472531 31472577 -168157573 - L2 LINE L2 -17 3255 3210 2140 97 0 7 chr5 31472761 31473059 -168157091 + AluSg SINE Alu 1 296 -14 278 330 18 9 chr5 31473069 31473181 -168156969 + MIR SINE MIR 81 193 -69 1979 133 0 3 chr5 31473370 31473670 -168156480 - AluSx SINE Alu -13 299 1 1438 53 5 5 chr5 31474002 31474191 -168155959 + AluY SINE Alu 123 311 0 2266 87 0 3 chr5 31475203 31475503 -168154647 + AluSx SINE Alu 1 299 -13 2079 93 17 0 chr5 31476056 31476346 -168153804 - AluSx SINE Alu -17 295 1 867 198 0 16 chr5 31476408 31476590 -168153560 - AluJ SINE Alu 0 312 134 252 0 0 0 chr5 31476740 31476768 -168153382 + (TG)n Simple_repeat Simple_repeat 2 29 0 337 191 0 0 chr5 31477297 31477365 -168152785 - MLT2B1 LTR ERVL -2 518 451 454 225 0 0 chr5 31477394 31477474 -168152676 + Tigger3(Golem) DNA MER2_type 1 80 -2949 579 188 20 0 chr5 31477592 31477693 -168152457 + Tigger3(Golem) DNA MER2_type 2935 3037 0 207 162 0 0 chr5 31477695 31477732 -168152418 + (TA)n Simple_repeat Simple_repeat 1 37 0 1675 148 4 14 chr5 31477776 31478054 -168152096 + AluJo SINE Alu 28 302 -10 344 217 0 0 chr5 31478064 31478124 -168152026 - MLT2D LTR ERVL -74 340 281 432 0 0 0 chr5 31478131 31478179 -168151971 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 832 126 0 16 chr5 31478179 31478299 -168151851 - AluJ SINE Alu -191 121 2 1653 156 48 54 chr5 31478301 31478338 -168151812 - MLT2C2 LTR ERVL -132 332 296 1967 115 18 0 chr5 31478338 31478624 -168151526 - AluSp SINE Alu -20 293 3 1653 156 48 54 chr5 31478624 31478920 -168151230 - MLT2C2 LTR ERVL -168 296 1 2099 138 0 0 chr5 31479077 31479382 -168150768 + AluSx SINE Alu 1 305 -7 2021 125 3 7 chr5 31479900 31480197 -168149953 + AluSx SINE Alu 1 296 -16 287 226 48 0 chr5 31480197 31480321 -168149829 + (TA)n Simple_repeat Simple_repeat 1 130 0 531 323 89 10 chr5 31480389 31480885 -168149265 - L1M4 LINE L1 -1305 4841 4307 1981 139 10 0 chr5 31480886 31481189 -168148961 - AluSx SINE Alu -6 306 1 458 177 194 38 chr5 31481513 31481699 -168148451 + MIR SINE MIR 48 262 0 1538 196 0 11 chr5 31481800 31482116 -168148034 - AluJb SINE Alu 0 313 1 2027 110 4 0 chr5 31482274 31482584 -168147566 - AluSq SINE Alu 0 313 3 2473 30 7 7 chr5 31483153 31483458 -168146692 - AluY SINE Alu -6 305 1 2406 66 0 0 chr5 31483702 31484006 -168146144 + AluY SINE Alu 1 304 -7 2074 90 6 35 chr5 31484508 31484819 -168145331 - AluSq SINE Alu -11 302 1 2352 80 0 3 chr5 31485385 31485696 -168144454 - AluSg SINE Alu 0 310 1 387 0 0 0 chr5 31485923 31485966 -168144184 + (TG)n Simple_repeat Simple_repeat 2 44 0 1963 109 7 30 chr5 31485971 31486273 -168143877 - AluSq SINE Alu -16 297 3 214 164 16 16 chr5 31486273 31486322 -168143828 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 2019 105 3 14 chr5 31486322 31486616 -168143534 - AluSx SINE Alu -21 291 1 241 339 41 47 chr5 31486741 31486912 -168143238 - MIR SINE MIR -32 230 61 383 304 24 30 chr5 31487294 31487344 -168142806 - L2 LINE L2 -6 3307 3258 1914 133 20 3 chr5 31487344 31487646 -168142504 + AluSx SINE Alu 1 307 -5 383 304 24 30 chr5 31487646 31487763 -168142387 - L2 LINE L2 -55 3258 3141 2102 128 0 0 chr5 31487814 31488118 -168142032 - AluSx SINE Alu -8 304 1 1610 157 64 0 chr5 31488217 31488498 -168141652 - AluSx SINE Alu -13 299 1 2034 115 0 0 chr5 31488528 31488815 -168141335 + AluSx SINE Alu 1 287 -25 309 51 0 0 chr5 31488821 31488860 -168141290 + (CATA)n Simple_repeat Simple_repeat 1 39 0 203 262 0 0 chr5 31488957 31488999 -168141151 + MIR3 SINE MIR 119 160 -48 1254 142 5 0 chr5 31489190 31489387 -168140763 - AluSg/x SINE Alu -16 296 99 1022 157 0 0 chr5 31489387 31489540 -168140610 - AluSq SINE Alu -160 153 1 219 69 0 0 chr5 31489756 31489785 -168140365 + (A)n Simple_repeat Simple_repeat 1 29 0 440 295 166 0 chr5 31489987 31490228 -168139922 + L1MC4a LINE L1 5585 5865 -1943 1867 108 56 0 chr5 31490510 31490796 -168139354 - AluSq SINE Alu -11 302 1 2187 88 0 7 chr5 31491302 31491598 -168138552 - AluY SINE Alu -17 294 1 222 91 0 0 chr5 31491834 31491867 -168138283 + (CA)n Simple_repeat Simple_repeat 2 34 0 308 200 0 15 chr5 31492743 31492808 -168137342 - L1MDa LINE L1 -4036 2504 2441 1955 96 7 4 chr5 31492820 31493091 -168137059 - AluSx SINE Alu -40 272 1 1911 117 0 29 chr5 31494336 31494643 -168135507 + AluSx SINE Alu 1 298 -14 592 225 174 0 chr5 31494784 31494962 -168135188 + MER3 DNA MER1_type 1 209 0 1323 98 0 16 chr5 31495727 31495903 -168134247 - AluSg/x SINE Alu -3 309 135 2126 116 6 0 chr5 31495903 31496214 -168133936 - AluSp SINE Alu 0 313 1 1323 98 0 16 chr5 31496214 31496230 -168133920 - AluSg/x SINE Alu -177 135 120 1684 151 10 24 chr5 31496511 31496809 -168133341 - AluJo SINE Alu -18 294 1 401 266 35 0 chr5 31496983 31497096 -168133054 + MER94 DNA DNA 2 118 -16 1581 161 0 11 chr5 31497191 31497470 -168132680 - AluJb SINE Alu -36 276 1 191 340 0 0 chr5 31497481 31497528 -168132622 - L2 LINE L2 -102 3170 3124 1926 141 7 3 chr5 31497888 31498194 -168131956 + AluJb SINE Alu 1 307 -5 1906 106 0 60 chr5 31498478 31498812 -168131338 - AluSq SINE Alu 0 316 1 220 67 0 67 chr5 31499476 31499508 -168130642 + (TTCCC)n Simple_repeat Simple_repeat 3 33 -11 1958 108 0 4 chr5 31499508 31499787 -168130363 - AluSg SINE Alu -32 278 1 220 67 0 67 chr5 31499787 31499799 -168130351 + (TTCCC)n Simple_repeat Simple_repeat 33 44 0 1697 202 45 8 chr5 31499809 31500161 -168129989 + MLT1A1 LTR MaLR 1 365 0 309 249 117 61 chr5 31500512 31500709 -168129441 - MIR SINE MIR -14 248 41 492 18 0 0 chr5 31500923 31500980 -168129170 + (TG)n Simple_repeat Simple_repeat 1 57 0 327 246 0 0 chr5 31501087 31501156 -168128994 - L2 LINE L2 0 3272 3204 1559 168 36 11 chr5 31501275 31501555 -168128595 + AluJb SINE Alu 1 287 -25 1883 125 0 14 chr5 31502343 31502640 -168127510 - AluSx SINE Alu -19 293 1 2292 71 10 3 chr5 31503417 31503726 -168126424 - AluY SINE Alu 0 311 1 1913 128 0 20 chr5 31503728 31504032 -168126118 - AluSx SINE Alu -14 298 1 375 290 95 38 chr5 31504139 31504234 -168125916 + MIR SINE MIR 31 119 -143 1845 153 62 37 chr5 31504234 31504587 -168125563 + MLT1A1 LTR MaLR 1 362 -3 375 290 95 38 chr5 31504587 31504699 -168125451 + MIR SINE MIR 119 250 -12 2177 112 7 0 chr5 31505735 31506040 -168124110 + AluSx SINE Alu 1 307 -5 4100 166 62 22 chr5 31506192 31507066 -168123084 - L1MB7 LINE L1 0 6184 5276 1228 128 5 0 chr5 31507078 31507265 -168122885 - AluSg/x SINE Alu -8 304 117 1433 84 14 33 chr5 31507267 31507480 -168122670 + AluSg/x SINE Alu 91 299 -13 257 222 0 0 chr5 31507500 31507554 -168122596 - L1MB7 LINE L1 -1194 4952 4899 335 258 0 34 chr5 31507554 31507643 -168122507 + L1M4 LINE L1 5215 5300 -846 1834 107 7 18 chr5 31507646 31507927 -168122223 + AluSx SINE Alu 35 312 0 1744 164 13 10 chr5 31507964 31508275 -168121875 + AluJo SINE Alu 1 312 0 2089 114 0 25 chr5 31508319 31508636 -168121514 - AluSq SINE Alu -4 309 1 21 36 0 0 chr5 31508638 31508666 -168121484 + AT_rich Low_complexity Low_complexity 1 28 0 264 174 0 0 chr5 31508904 31508950 -168121200 - L2 LINE L2 -2 3270 3225 1452 73 0 5 chr5 31509130 31509322 -168120828 - AluY SINE Alu -10 301 111 233 167 0 100 chr5 31509322 31509382 -168120768 - AluSp SINE Alu -140 163 110 2025 98 0 47 chr5 31509571 31509888 -168120262 - AluSx SINE Alu -10 302 1 1179 120 0 0 chr5 31510615 31510790 -168119360 - AluY SINE Alu -1 310 136 352 193 217 12 chr5 31510871 31510981 -168119169 - AluJ SINE Alu 0 308 182 827 158 0 0 chr5 31510981 31511114 -168119036 - AluJ SINE Alu -179 133 1 2071 123 0 0 chr5 31511165 31511467 -168118683 + AluSx SINE Alu 1 302 -10 1385 191 113 29 chr5 31511746 31512091 -168118059 - MLT1A2 LTR MaLR 0 374 1 2315 97 0 0 chr5 31512408 31512718 -168117432 + AluSg SINE Alu 1 310 0 1907 116 20 7 chr5 31513368 31513660 -168116490 + AluSx SINE Alu 1 296 -16 747 230 53 79 chr5 31514590 31514823 -168115327 - MIR SINE MIR -3 259 32 1924 120 0 47 chr5 31514823 31515000 -168115150 - AluSx SINE Alu -10 302 145 1888 128 54 7 chr5 31515000 31515296 -168114854 - AluSg SINE Alu 0 310 1 1924 120 0 47 chr5 31515296 31515435 -168114715 - AluSx SINE Alu -167 145 1 747 230 53 79 chr5 31515435 31515466 -168114684 - MIR SINE MIR -230 32 2 26 0 0 0 chr5 31515514 31515540 -168114610 + AT_rich Low_complexity Low_complexity 1 26 0 356 303 91 18 chr5 31515830 31515995 -168114155 - MIR SINE MIR -36 226 50 589 303 20 20 chr5 31516176 31516374 -168113776 - LTR67 LTR ERVL -9 548 351 225 94 0 0 chr5 31516639 31516671 -168113479 + (CCCCAG)n Simple_repeat Simple_repeat 1 32 0 1833 182 16 0 chr5 31516700 31517007 -168113143 - MLT1A1 LTR MaLR 0 365 54 239 208 21 0 chr5 31517006 31517054 -168113096 + MLT1B LTR MaLR 8 56 -334 * 261 86 0 0 chr5 31517067 31517102 -168113048 - MLT1A1 LTR MaLR -330 35 1 325 77 0 19 chr5 31517528 31517580 -168112570 + Alu SINE Alu 250 300 0 788 98 0 0 chr5 31517588 31517690 -168112460 + MSTA LTR MaLR 327 428 0 1613 139 75 0 chr5 31517783 31518050 -168112100 - AluJb SINE Alu -21 291 5 1556 74 5 0 chr5 31519792 31519994 -168110156 - AluSx SINE Alu -109 203 1 280 67 0 22 chr5 31520006 31520051 -168110099 - L1MC1 LINE L1 -9 6324 6281 180 111 0 0 chr5 31520052 31520079 -168110071 + (A)n Simple_repeat Simple_repeat 1 27 0 1198 188 28 53 chr5 31520079 31520361 -168109789 + AluJo SINE Alu 1 275 -37 1284 194 21 0 chr5 31520391 31520661 -168109489 + AluJo SINE Alu 38 312 0 996 158 22 33 chr5 31520668 31520851 -168109299 - L1MC1 LINE L1 -50 6283 6103 579 209 32 70 chr5 31520872 31521030 -168109120 + AluJb SINE Alu 3 154 -158 2291 142 48 5 chr5 31521043 31521440 -168108710 - L1MC1 LINE L1 -244 6089 5677 1789 151 0 20 chr5 31521747 31522045 -168108105 + AluJb SINE Alu 1 292 -20 894 176 12 57 chr5 31523014 31523258 -168106892 - AluSg/x SINE Alu -9 301 69 2177 112 7 0 chr5 31524508 31524813 -168105337 + AluSx SINE Alu 1 307 -5 4077 166 63 22 chr5 31524965 31525838 -168104312 - L1MB7 LINE L1 0 6184 5276 1778 123 17 17 chr5 31525850 31526143 -168104007 - AluSx SINE Alu -8 304 12 22 0 0 0 chr5 31527259 31527281 -168102869 + AT_rich Low_complexity Low_complexity 1 22 0 5137 165 18 24 chr5 31528683 31529475 -168100675 + L1PA16 LINE L1 4681 5476 -690 1462 166 10 28 chr5 31529475 31529765 -168100385 + AluJo SINE Alu 12 296 -16 2101 102 10 0 chr5 31529775 31530079 -168100071 + AluSq SINE Alu 1 307 -6 5137 165 18 24 chr5 31530079 31530765 -168099385 + L1PA16 LINE L1 5485 6163 -3 2009 108 3 14 chr5 31530897 31531217 -168098933 - AluSx SINE Alu 0 312 1 339 106 0 0 chr5 31531824 31531871 -168098279 - AluS SINE Alu -226 77 31 2069 97 14 0 chr5 31532014 31532293 -168097857 - AluSx SINE Alu -18 294 12 855 202 16 27 chr5 31532881 31533064 -168097086 - MER20 DNA MER1_type -38 181 1 1321 102 0 11 chr5 31533105 31533292 -168096858 + AluSq SINE Alu 1 185 -128 2162 167 30 40 chr5 31533345 31533734 -168096416 + MSTB LTR MaLR 1 387 -39 2286 40 43 17 chr5 31533734 31534036 -168096114 - AluY SINE Alu -1 310 1 2162 167 30 40 chr5 31534036 31534076 -168096074 + MSTB LTR MaLR 387 426 0 555 134 0 0 chr5 31534327 31534409 -168095741 + AluS SINE Alu 3 84 -228 1900 151 0 0 chr5 31534568 31534860 -168095290 - AluSx SINE Alu -20 292 1 1005 111 0 0 chr5 31534860 31534995 -168095155 - AluSq/x SINE Alu -177 135 1 2155 89 0 0 chr5 31535804 31536119 -168094031 + AluSx SINE Alu 3 317 0 2800 152 15 41 chr5 31536139 31536440 -168093710 - L1MB3 LINE L1 -19 6164 5882 2297 88 0 3 chr5 31536440 31536746 -168093404 - AluSq SINE Alu -8 305 1 2800 152 15 41 chr5 31536746 31536982 -168093168 - L1MB3 LINE L1 -301 5882 5641 415 333 7 20 chr5 31537185 31537332 -168092818 + MIR3 SINE MIR 37 181 -27 24 0 0 0 chr5 31538137 31538161 -168091989 + AT_rich Low_complexity Low_complexity 1 24 0 2036 128 0 3 chr5 31538339 31538644 -168091506 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr5 31539953 31539974 -168090176 + AT_rich Low_complexity Low_complexity 1 21 0 507 217 154 21 chr5 31541421 31541564 -168088586 + MER58C DNA MER1_type 7 168 -47 816 154 0 0 chr5 31541627 31541744 -168088406 - AluSq/x SINE Alu -194 118 2 189 0 0 0 chr5 31545922 31545943 -168084207 + (TG)n Simple_repeat Simple_repeat 2 22 0 775 217 6 25 chr5 31546015 31546172 -168083978 - FRAM SINE Alu -12 154 1 2260 84 0 0 chr5 31546459 31546755 -168083395 + AluSx SINE Alu 1 296 -16 1335 209 148 25 chr5 31547338 31547769 -168082381 + Charlie4a DNA MER1_type 8 491 -17 278 130 0 22 chr5 31547921 31547967 -168082183 - MER5A DNA MER1_type -93 96 52 579 185 8 15 chr5 31549528 31549658 -168080492 - AluSx SINE Alu 0 310 182 1294 135 5 0 chr5 31549851 31550043 -168080107 - AluSx SINE Alu -119 193 1 218 271 163 47 chr5 31550102 31550231 -168079919 - MER5A DNA MER1_type -3 186 43 1436 186 9 47 chr5 31550422 31550744 -168079406 - AluJo SINE Alu -2 310 1 228 189 0 0 chr5 31550811 31550848 -168079302 - MIR SINE MIR -61 147 111 240 330 9 47 chr5 31551181 31551287 -168078863 + MIR SINE MIR 90 191 -71 1241 197 68 4 chr5 31551293 31551557 -168078593 + AluSx SINE Alu 1 281 -31 185 178 22 0 chr5 31551594 31551639 -168078511 + GA-rich Low_complexity Low_complexity 1 46 0 2219 101 3 0 chr5 31552558 31552865 -168077285 + AluSx SINE Alu 1 308 -4 388 153 0 14 chr5 31553116 31553188 -168076962 - LTR67 LTR ERVL -27 530 460 185 252 68 121 chr5 31553196 31553402 -168076748 - L3 LINE CR1 -221 1356 1162 1285 87 0 157 chr5 31553410 31553754 -168076396 - AluSg SINE Alu -11 299 10 293 273 16 66 chr5 31553795 31553916 -168076234 - L3 LINE CR1 -494 1083 969 1281 167 86 0 chr5 31554412 31554650 -168075500 - L1ME1 LINE L1 -6 6158 5966 1998 164 14 25 chr5 31554650 31554859 -168075291 - MLT1A1 LTR MaLR -2 363 158 1500 210 0 3 chr5 31554859 31555168 -168074982 - AluJb SINE Alu -4 308 1 1998 164 14 25 chr5 31555168 31555325 -168074825 - MLT1A1 LTR MaLR -207 158 1 1281 167 86 0 chr5 31555325 31555474 -168074676 - L1ME1 LINE L1 -198 5966 5759 2217 88 3 0 chr5 31556709 31557003 -168073147 - AluSg1 SINE Alu -14 295 1 1913 106 10 45 chr5 31557894 31558205 -168071945 - AluSg SINE Alu -10 300 1 369 264 78 23 chr5 31558210 31558339 -168071811 - L3 LINE CR1 -473 1104 969 1281 167 86 0 chr5 31558835 31559073 -168071077 - L1ME1 LINE L1 -6 6158 5966 1984 164 14 22 chr5 31559073 31559282 -168070868 - MLT1A1 LTR MaLR -2 363 157 1500 210 0 3 chr5 31559282 31559591 -168070559 - AluJb SINE Alu -4 308 1 1984 164 14 22 chr5 31559591 31559747 -168070403 - MLT1A1 LTR MaLR -208 157 1 1281 167 86 0 chr5 31559747 31559896 -168070254 - L1ME1 LINE L1 -198 5966 5759 2134 107 7 7 chr5 31561001 31561309 -168068841 + AluSx SINE Alu 3 310 -2 226 281 144 46 chr5 31561310 31561637 -168068513 + L1 LINE L1 4699 5057 -1089 1455 171 0 73 chr5 31561754 31561882 -168068268 + AluJo SINE Alu 1 137 -175 2081 87 24 0 chr5 31561882 31562169 -168067981 - AluSc SINE Alu -15 294 1 1455 171 0 73 chr5 31562169 31562356 -168067794 + AluJo SINE Alu 137 293 -19 2109 83 0 33 chr5 31562868 31563169 -168066981 + AluSg SINE Alu 1 291 -19 184 42 0 0 chr5 31563513 31563537 -168066613 + (TTTTG)n Simple_repeat Simple_repeat 2 130 0 1788 103 0 56 chr5 31563537 31563839 -168066311 - AluSx SINE Alu -27 285 1 2368 213 59 21 chr5 31563840 31564540 -168065610 - L1 LINE L1 -2965 3181 2456 325 182 223 50 chr5 31564540 31564661 -168065489 + L1 LINE L1 3167 3308 -2838 732 56 0 0 chr5 31564661 31564751 -168065399 + AluY SINE Alu 160 249 -62 1425 127 4 4 chr5 31564751 31564785 -168065365 + AluSg/x SINE Alu 83 116 -194 226 43 0 65 chr5 31564785 31564831 -168065319 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1425 127 4 4 chr5 31564831 31565024 -168065126 + AluSg/x SINE Alu 115 310 0 589 152 0 10 chr5 31565140 31565239 -168064911 - FRAM SINE Alu -8 168 71 462 209 22 0 chr5 31565365 31565456 -168064694 - FRAM SINE Alu -84 92 1 2168 109 3 3 chr5 31566495 31566807 -168063343 - AluSq SINE Alu -1 312 1 1499 167 0 25 chr5 31566894 31567170 -168062980 - AluJo SINE Alu -33 279 11 1908 105 0 14 chr5 31567201 31567486 -168062664 - AluSg SINE Alu -28 282 2 43 20 0 0 chr5 31567493 31567543 -168062607 + AT_rich Low_complexity Low_complexity 1 50 0 1909 133 31 0 chr5 31567618 31567904 -168062246 - AluSx SINE Alu -17 295 1 1654 211 72 34 chr5 31567963 31568408 -168061742 - MLT1C LTR MaLR 0 467 6 208 93 70 0 chr5 31568421 31568464 -168061686 + CT-rich Low_complexity Low_complexity 4 49 0 1742 114 54 20 chr5 31568466 31568763 -168061387 - AluSp SINE Alu -6 307 1 27 92 0 0 chr5 31569050 31569126 -168061024 + AT_rich Low_complexity Low_complexity 1 76 0 253 270 40 27 chr5 31569166 31569240 -168060910 + L2 LINE L2 3153 3227 -45 1573 156 4 14 chr5 31569523 31569799 -168060351 + AluJb SINE Alu 21 293 -19 1529 143 99 0 chr5 31569893 31570165 -168059985 - AluSg SINE Alu -6 304 6 262 88 70 88 chr5 31572938 31572964 -168057186 + MADE1 DNA Mariner 1 26 -54 2400 50 0 22 chr5 31572964 31573281 -168056869 - AluY SINE Alu -1 310 1 262 88 70 88 chr5 31573281 31573311 -168056839 + MADE1 DNA Mariner 26 56 -24 3580 112 70 16 chr5 31573317 31573872 -168056278 - LTR9B LTR ERV1 0 644 60 1947 112 7 17 chr5 31573872 31574168 -168055982 + AluSp SINE Alu 1 293 -20 523 263 86 38 chr5 31574351 31574560 -168055590 + MIR SINE MIR 35 253 -9 788 219 0 0 chr5 31576260 31576415 -168053735 + MLT1A1 LTR MaLR 1 155 -210 1622 104 0 0 chr5 31576415 31576637 -168053513 + AluSg/x SINE Alu 76 297 -15 1435 124 18 5 chr5 31576637 31576855 -168053295 + AluSp SINE Alu 2 222 -91 1594 184 0 4 chr5 31577102 31577380 -168052770 - AluJb SINE Alu -35 277 1 549 234 94 16 chr5 31577461 31577589 -168052561 + L2 LINE L2 3133 3270 -2 1783 133 12 62 chr5 31578706 31578937 -168051213 + AluJo SINE Alu 1 214 -98 1890 135 0 0 chr5 31578937 31579247 -168050903 - AluSx SINE Alu 0 310 1 1783 133 12 62 chr5 31579247 31579338 -168050812 + AluJo SINE Alu 214 308 -4 561 256 38 25 chr5 31579510 31579670 -168050480 - LTR40b LTR ERVL -34 428 267 808 178 41 0 chr5 31579748 31579894 -168050256 + AluJb SINE Alu 147 298 -14 1644 88 0 25 chr5 31580244 31580482 -168049668 - THE1B LTR MaLR -132 232 1 1241 157 42 0 chr5 31580779 31580996 -168049154 - AluJo SINE Alu -2 310 85 1930 101 6 35 chr5 31581694 31582011 -168048139 - AluSg SINE Alu -2 308 1 719 178 0 30 chr5 31582018 31582153 -168047997 - FLAM_C SINE Alu -2 131 1 1978 120 0 3 chr5 31582686 31582969 -168047181 + AluSx SINE Alu 1 282 -30 2194 92 14 0 chr5 31583433 31583727 -168046423 + AluY SINE Alu 1 298 -13 2039 107 0 32 chr5 31584283 31584593 -168045557 + AluSx SINE Alu 1 300 -12 323 277 89 27 chr5 31584721 31584793 -168045357 - MIR3 SINE MIR -42 166 88 355 306 105 0 chr5 31584793 31584917 -168045233 + MIR SINE MIR 3 139 -123 2043 132 83 8 chr5 31585052 31585438 -168044712 - L1MB7 LINE L1 -22 6162 5748 1950 113 0 11 chr5 31585796 31586102 -168044048 - AluSx SINE Alu 0 303 1 543 297 139 32 chr5 31587005 31587320 -168042830 - L3 LINE CR1 -291 1286 911 1853 152 7 0 chr5 31587320 31587622 -168042528 - AluJb SINE Alu -8 304 1 543 297 139 32 chr5 31587622 31587737 -168042413 - L3 LINE CR1 -666 911 810 1120 167 155 4 chr5 31589673 31589912 -168040238 + AluJb SINE Alu 23 297 -15 1466 188 14 3 chr5 31590482 31590775 -168039375 + AluSx SINE Alu 1 296 -16 28 29 0 0 chr5 31590823 31590858 -168039292 + AT_rich Low_complexity Low_complexity 1 35 0 2421 53 13 3 chr5 31590866 31591168 -168038982 + AluSp SINE Alu 1 305 -8 292 314 99 70 chr5 31592615 31592838 -168037312 + L2 LINE L2 2217 2432 -882 453 206 88 0 chr5 31592838 31592940 -168037210 - MER81 DNA DNA -2 112 2 292 314 99 70 chr5 31592940 31593190 -168036960 + L2 LINE L2 2432 2704 -610 234 263 18 0 chr5 31593204 31593261 -168036889 + (CA)n Simple_repeat Simple_repeat 2 59 0 182 339 0 0 chr5 31593333 31593395 -168036755 + L2 LINE L2 2800 2861 -453 748 230 92 98 chr5 31593397 31593766 -168036384 - MER21B LTR ERV1 -363 500 134 238 333 62 19 chr5 31593815 31593977 -168036173 + L2 LINE L2 2897 3065 -207 2277 156 41 30 chr5 31594129 31594480 -168035670 - L1PB4 LINE L1 -9 6147 5789 2209 109 0 6 chr5 31594480 31594793 -168035357 - AluSx SINE Alu -1 311 1 2277 156 41 30 chr5 31594793 31594877 -168035273 - L1PB4 LINE L1 -367 5789 5707 400 235 65 26 chr5 31594963 31595116 -168035034 + MIR3 SINE MIR 33 191 -17 948 298 110 36 chr5 31595719 31596681 -168033469 - L2 LINE L2 0 3313 2282 2146 120 0 13 chr5 31596816 31597132 -168033018 + AluSx SINE Alu 1 312 0 181 269 97 60 chr5 31598142 31598276 -168031874 - L2 LINE L2 -219 3053 2915 1840 116 43 20 chr5 31599075 31599378 -168030772 - AluSx SINE Alu -2 310 1 1884 124 28 3 chr5 31599567 31599857 -168030293 - AluSx SINE Alu -15 297 1 351 272 175 34 chr5 31599920 31600126 -168030024 - MIR SINE MIR -7 255 21 1048 172 34 10 chr5 31600274 31600478 -168029672 - MER3 DNA MER1_type 0 209 1 226 118 0 59 chr5 31600801 31600852 -168029298 + (TCTCCC)n Simple_repeat Simple_repeat 2 49 0 1442 111 69 5 chr5 31601922 31602138 -168028012 - MER30 DNA MER1_type 0 230 1 201 179 26 0 chr5 31602266 31602305 -168027845 + CT-rich Low_complexity Low_complexity 2 41 0 1849 117 0 0 chr5 31602667 31602924 -168027226 + AluSg SINE Alu 39 295 -15 361 305 67 12 chr5 31603431 31603595 -168026555 - L3 LINE CR1 -341 1236 1064 1628 149 0 71 chr5 31603871 31604040 -168026110 - AluJb SINE Alu -13 299 162 1518 166 18 7 chr5 31604040 31604324 -168025826 - AluSx SINE Alu -6 306 20 1628 149 0 71 chr5 31604324 31604476 -168025674 - AluJb SINE Alu -150 162 1 193 140 0 40 chr5 31604990 31605040 -168025110 + (GGGAGA)n Simple_repeat Simple_repeat 2 49 0 769 128 112 0 chr5 31605661 31605786 -168024364 + MER30 DNA MER1_type 92 230 0 1039 153 0 0 chr5 31606305 31606475 -168023675 + FRAM SINE Alu 1 169 -7 2227 109 3 0 chr5 31607437 31607749 -168022401 - AluSp SINE Alu 0 313 1 2140 161 0 12 chr5 31607780 31608121 -168022029 + MER1B DNA MER1_type 1 337 -2 292 70 42 28 chr5 31609613 31609684 -168020466 + (CA)n Simple_repeat Simple_repeat 1 72 0 2236 118 0 0 chr5 31609840 31610153 -168019997 - AluSq SINE Alu 0 313 1 1651 173 3 19 chr5 31610446 31610753 -168019397 + AluJb SINE Alu 1 302 -10 291 311 11 11 chr5 31610757 31610847 -168019303 - MIR SINE MIR -150 112 23 350 260 82 61 chr5 31611617 31611813 -168018337 - L1ME4a LINE L1 -6 6115 5916 530 281 45 49 chr5 31611838 31612006 -168018144 + MIR SINE MIR 30 198 -64 2255 88 3 0 chr5 31612006 31612303 -168017847 + AluSx SINE Alu 1 298 -14 530 281 45 49 chr5 31612303 31612358 -168017792 + MIR SINE MIR 198 252 -10 1265 177 6 82 chr5 31612499 31612815 -168017335 - AluJo SINE Alu -12 300 9 1482 145 0 0 chr5 31612828 31613055 -168017095 - AluSx SINE Alu -4 308 82 2441 52 0 10 chr5 31613055 31613364 -168016786 - AluY SINE Alu -4 307 1 544 194 0 0 chr5 31613365 31613458 -168016692 - AluSx SINE Alu -219 94 2 855 117 0 8 chr5 31614154 31614282 -168015868 + FLAM_C SINE Alu 1 127 -16 324 0 0 0 chr5 31614283 31614319 -168015831 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 2099 95 46 16 chr5 31614427 31614731 -168015419 - AluSq SINE Alu 0 313 1 2163 101 3 35 chr5 31615199 31615517 -168014633 + AluSg SINE Alu 3 310 0 1921 131 10 27 chr5 31615580 31615878 -168014272 + AluJo SINE Alu 1 293 -19 2261 99 26 0 chr5 31615944 31616246 -168013904 + AluSx SINE Alu 1 310 -2 2245 101 0 23 chr5 31616847 31617175 -168012975 + AluSx SINE Alu 1 321 0 1968 134 0 34 chr5 31617340 31617638 -168012512 + AluJb SINE Alu 1 288 -24 534 189 0 76 chr5 31617955 31618087 -168012063 + MER91B DNA MER1_type 2 123 -67 2204 109 0 13 chr5 31618518 31618821 -168011329 - AluSx SINE Alu -13 299 1 44 70 0 0 chr5 31618933 31619019 -168011131 + AT_rich Low_complexity Low_complexity 1 86 0 400 260 147 44 chr5 31619062 31619519 -168010631 - L1ME4a LINE L1 -3 6118 5615 1684 100 30 4 chr5 31620840 31621070 -168009080 - AluSc SINE Alu -2 307 72 2455 86 0 0 chr5 31621073 31621375 -168008775 - AluSx SINE Alu -10 302 1 1954 128 0 26 chr5 31621381 31621685 -168008465 - AluJo SINE Alu -16 296 1 221 250 12 12 chr5 31623030 31623110 -168007040 + L2 LINE L2 3170 3249 -64 2048 128 0 16 chr5 31623288 31623600 -168006550 + AluSx SINE Alu 1 307 -5 265 277 0 0 chr5 31624027 31624092 -168006058 - MIR3 SINE MIR -9 199 135 2114 116 3 7 chr5 31625273 31625565 -168004585 - AluJo SINE Alu -10 302 12 331 250 12 0 chr5 31625616 31625696 -168004454 + Charlie7 DNA MER1_type 1 81 -2531 207 100 0 0 chr5 31626163 31626193 -168003957 + (TA)n Simple_repeat Simple_repeat 2 31 0 564 109 0 43 chr5 31626193 31626285 -168003865 - AluSg SINE Alu -9 303 216 1150 105 0 20 chr5 31626285 31626438 -168003712 - AluSg SINE Alu -160 150 1 2391 92 7 3 chr5 31626775 31627078 -168003072 - AluSx SINE Alu -8 304 1 21 0 0 0 chr5 31627185 31627206 -168002944 + AT_rich Low_complexity Low_complexity 1 21 0 1945 97 9 103 chr5 31627388 31627727 -168002423 - AluSq SINE Alu -6 307 1 243 268 24 41 chr5 31627998 31628121 -168002029 - MER117 DNA MER1_type -31 166 46 2054 110 9 55 chr5 31628309 31628636 -168001514 - AluSx SINE Alu 0 312 1 184 330 66 57 chr5 31628934 31629161 -168000989 - L2 LINE L2 -530 2784 2556 3493 178 50 2 chr5 31629912 31630530 -167999620 + Tigger7 DNA MER2_type 3 650 -1837 2265 132 0 0 chr5 31630530 31630841 -167999309 + AluSx SINE Alu 1 311 -1 961 204 52 0 chr5 31630915 31631106 -167999044 - MER58A DNA MER1_type -23 201 1 191 114 29 0 chr5 31631260 31631295 -167998855 + GA-rich Low_complexity Low_complexity 4 39 0 2378 93 3 6 chr5 31631373 31631684 -167998466 + AluSp SINE Alu 1 310 -3 1117 205 19 0 chr5 31631689 31631899 -167998251 + MLT1A1 LTR MaLR 149 362 -3 479 65 0 0 chr5 31632004 31632066 -167998084 - Alu SINE Alu -255 63 2 24 53 0 0 chr5 31632239 31632277 -167997873 + AT_rich Low_complexity Low_complexity 1 38 0 267 269 0 15 chr5 31632544 31632611 -167997539 - MER94 DNA DNA -5 129 64 1767 170 3 3 chr5 31632627 31632909 -167997241 - AluJo SINE Alu -26 286 5 393 216 14 0 chr5 31632916 31632990 -167997160 - MER94 DNA DNA -59 75 1 305 27 68 27 chr5 31633295 31633368 -167996782 + (CA)n Simple_repeat Simple_repeat 2 77 0 598 42 90 12 chr5 31633380 31633547 -167996603 + (CA)n Simple_repeat Simple_repeat 1 180 0 2427 72 0 0 chr5 31634409 31634700 -167995450 + AluY SINE Alu 1 291 -20 1255 151 5 15 chr5 31634894 31635099 -167995051 + MER2 DNA MER2_type 1 203 -142 1094 44 15 0 chr5 31635110 31635247 -167994903 - SVA Other Other 0 1386 1248 365 278 56 31 chr5 31636329 31636491 -167993659 + MIR SINE MIR 30 195 -67 1876 103 4 11 chr5 31636497 31636758 -167993392 + AluSx SINE Alu 1 259 -53 1912 117 27 24 chr5 31637885 31638183 -167991967 - AluSc SINE Alu -10 299 1 22 35 0 0 chr5 31638253 31638282 -167991868 + AT_rich Low_complexity Low_complexity 1 29 0 224 261 14 14 chr5 31638489 31638563 -167991587 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr5 31638623 31638651 -167991499 + AT_rich Low_complexity Low_complexity 1 28 0 2140 127 0 3 chr5 31638693 31639000 -167991150 - AluSx SINE Alu -6 306 1 716 245 70 54 chr5 31639073 31639221 -167990929 + L1ME3A LINE L1 5139 5283 -881 2310 98 14 0 chr5 31639221 31639517 -167990633 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr5 31639521 31639543 -167990607 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 716 245 70 54 chr5 31639543 31639801 -167990349 + L1ME3A LINE L1 5285 5546 -618 593 239 62 0 chr5 31639924 31640054 -167990096 + MER58C DNA MER1_type 34 171 -44 1520 217 66 48 chr5 31640082 31640579 -167989571 + L1ME3A LINE L1 5650 6165 -2 285 200 17 0 chr5 31642005 31642065 -167988085 - MIR SINE MIR -118 144 84 2250 103 10 0 chr5 31642399 31642691 -167987459 - AluSx SINE Alu -17 295 1 1619 159 19 30 chr5 31643011 31643313 -167986837 + AluJo SINE Alu 14 312 0 793 194 133 0 chr5 31643328 31643508 -167986642 + MER3 DNA MER1_type 6 209 0 277 200 0 0 chr5 31643466 31643516 -167986634 - MER3 DNA MER1_type -120 89 40 * 2240 104 0 0 chr5 31644617 31644905 -167985245 - AluSx SINE Alu -23 289 2 186 43 0 0 chr5 31645245 31645268 -167984882 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 902 229 0 0 chr5 31645269 31645435 -167984715 - FRAM SINE Alu 0 166 1 404 171 0 0 chr5 31645906 31645982 -167984168 - MER116 DNA Mariner -4 76 1 338 253 30 10 chr5 31646478 31646577 -167983573 + MIR SINE MIR 113 213 -49 2207 134 0 10 chr5 31646773 31647087 -167983063 - AluJb SINE Alu -1 311 1 23 54 0 0 chr5 31647205 31647242 -167982908 + AT_rich Low_complexity Low_complexity 1 37 0 212 310 53 26 chr5 31647330 31647443 -167982707 - MIR SINE MIR -119 143 28 1796 159 18 0 chr5 31647682 31647959 -167982191 - AluJo SINE Alu -30 282 1 1999 133 0 33 chr5 31649269 31649570 -167980580 + AluSx SINE Alu 1 291 -21 23 0 0 0 chr5 31650822 31650845 -167979305 + AT_rich Low_complexity Low_complexity 1 23 0 2418 85 0 10 chr5 31650849 31651154 -167978996 + AluSq SINE Alu 1 302 -11 247 198 302 8 chr5 31653055 31653181 -167976969 + MIR SINE MIR 82 244 -18 201 330 64 18 chr5 31653847 31653956 -167976194 + MIR3 SINE MIR 77 190 -18 22 0 0 0 chr5 31654029 31654051 -167976099 + AT_rich Low_complexity Low_complexity 1 22 0 793 178 0 0 chr5 31654093 31654211 -167975939 + FLAM_C SINE Alu 1 118 -15 641 148 96 26 chr5 31654404 31654519 -167975631 - FLAM_C SINE Alu -16 127 5 2185 127 0 0 chr5 31654856 31655155 -167974995 - AluJb SINE Alu -13 299 1 1954 118 40 0 chr5 31655489 31655810 -167974340 - AluSx SINE Alu 0 332 1 254 254 30 15 chr5 31656100 31656167 -167973983 - L2 LINE L2 -4 3268 3201 337 309 35 50 chr5 31656431 31656632 -167973518 - L3 LINE CR1 -555 1022 825 2315 109 0 3 chr5 31656715 31657019 -167973131 - AluSx SINE Alu -9 303 1 2067 128 7 0 chr5 31657165 31657462 -167972688 + AluSx SINE Alu 4 302 -10 2053 133 7 3 chr5 31657492 31657792 -167972358 + AluSx SINE Alu 1 301 -11 2130 96 7 4 chr5 31658217 31658498 -167971652 + AluSq SINE Alu 1 282 -31 252 0 0 0 chr5 31658499 31658527 -167971623 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 2025 133 3 11 chr5 31658535 31658821 -167971329 + AluSx SINE Alu 1 284 -28 1322 213 75 22 chr5 31660299 31660727 -167969423 + L1MC4 LINE L1 7050 7526 -297 2243 117 0 13 chr5 31661032 31661341 -167968809 + AluSg SINE Alu 2 306 -4 833 176 63 31 chr5 31661343 31661502 -167968648 + AluJo/FRAM SINE Alu 131 294 -18 2069 123 0 13 chr5 31661659 31661960 -167968190 + AluSx SINE Alu 5 301 -11 251 282 39 0 chr5 31662048 31662126 -167968024 + L2 LINE L2 3191 3271 -1 2130 106 27 3 chr5 31662892 31663184 -167966966 + AluSx SINE Alu 1 299 -13 1494 106 0 37 chr5 31663872 31664117 -167966033 + AluSg/x SINE Alu 68 303 -9 313 313 35 50 chr5 31664200 31664401 -167965749 + L3 LINE CR1 825 1022 -555 254 254 30 15 chr5 31664665 31664732 -167965418 + L2 LINE L2 3201 3268 -4 1926 108 52 7 chr5 31665022 31665310 -167964840 + AluSx SINE Alu 1 301 -11 927 180 19 10 chr5 31665260 31665466 -167964684 + AluJo SINE Alu 85 292 -20 331 144 22 122 chr5 31665467 31665557 -167964593 - L1MB7 LINE L1 -57 6127 6047 433 83 0 17 chr5 31665934 31665994 -167964156 + AluSp/q SINE Alu 226 321 0 294 0 27 0 chr5 31665994 31666031 -167964119 + (CAAA)n Simple_repeat Simple_repeat 2 164 0 1950 126 13 3 chr5 31666059 31666368 -167963782 - AluSq SINE Alu -1 312 1 1873 144 0 3 chr5 31666606 31666905 -167963245 - AluJo SINE Alu -14 298 1 183 80 0 0 chr5 31667017 31667042 -167963108 + (CA)n Simple_repeat Simple_repeat 1 25 0 2344 83 0 3 chr5 31667358 31667671 -167962479 - AluSx SINE Alu 0 312 1 2336 96 0 0 chr5 31669141 31669454 -167960696 - AluSq SINE Alu 0 313 1 216 0 0 0 chr5 31669801 31669825 -167960325 + (A)n Simple_repeat Simple_repeat 1 24 0 720 228 91 121 chr5 31669834 31670307 -167959843 - LTR40a LTR ERVL -60 459 1 782 241 131 24 chr5 31672971 31673261 -167956889 - HAL1 LINE L1 -2183 324 4 433 238 135 8 chr5 31673290 31673416 -167956734 - MIR SINE MIR -118 144 3 298 79 0 0 chr5 31673562 31673600 -167956550 - U2 snRNA snRNA -150 38 1 2070 115 3 0 chr5 31674154 31674449 -167955701 - AluSx SINE Alu -16 296 1 1916 133 17 7 chr5 31674885 31675186 -167954964 - AluSx SINE Alu -8 304 1 1797 100 0 0 chr5 31675791 31676031 -167954119 - AluSx SINE Alu -12 300 61 681 157 0 60 chr5 31676032 31676166 -167953984 - FLAM_A SINE Alu -7 126 1 1666 80 59 80 chr5 31676456 31676777 -167953373 - AluY SINE Alu 0 315 1 228 322 11 35 chr5 31677343 31677430 -167952720 + MIR SINE MIR 20 104 -104 2203 95 0 7 chr5 31678372 31678667 -167951483 - AluSg SINE Alu -16 294 2 642 196 45 124 chr5 31678670 31678775 -167951375 + ORSL DNA AcHobo 31 143 -132 2067 108 3 29 chr5 31678775 31679089 -167951061 + AluSc SINE Alu 1 306 -3 642 196 45 124 chr5 31679089 31679249 -167950901 + ORSL DNA AcHobo 143 275 0 398 294 136 44 chr5 31679272 31679500 -167950650 + MIR SINE MIR 4 252 -10 5892 94 46 27 chr5 31679616 31682367 -167947783 + SVA Other Other 12 1369 -17 261 0 0 0 chr5 31682373 31682402 -167947748 + (CAA)n Simple_repeat Simple_repeat 2 30 0 186 103 0 0 chr5 31682423 31682452 -167947698 + (A)n Simple_repeat Simple_repeat 1 29 0 897 28 0 0 chr5 31682460 31682567 -167947583 + AluY SINE Alu 2 108 -203 1774 64 0 30 chr5 31682567 31682800 -167947350 + AluY SINE Alu 69 294 -17 2139 98 3 35 chr5 31682805 31683120 -167947030 + AluSx SINE Alu 1 305 -7 237 303 124 0 chr5 31683441 31683530 -167946620 - MIR3 SINE MIR -32 176 77 364 298 58 0 chr5 31683864 31683985 -167946165 + MIR SINE MIR 20 147 -61 1906 151 3 0 chr5 31684146 31684450 -167945700 - AluSq SINE Alu -8 305 1 2079 117 0 0 chr5 31684570 31684861 -167945289 + AluSq SINE Alu 1 291 -22 1952 117 3 29 chr5 31685942 31686249 -167943901 - AluSc SINE Alu -10 299 1 22 35 0 0 chr5 31686319 31686348 -167943802 + AT_rich Low_complexity Low_complexity 1 29 0 224 261 14 14 chr5 31686554 31686628 -167943522 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr5 31686688 31686716 -167943434 + AT_rich Low_complexity Low_complexity 1 28 0 1819 154 3 3 chr5 31686758 31687064 -167943086 - AluSx SINE Alu -6 306 1 708 245 70 54 chr5 31687134 31687282 -167942868 + L1ME3A LINE L1 5139 5283 -881 2180 98 14 0 chr5 31687282 31687578 -167942572 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr5 31687582 31687604 -167942546 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 708 245 70 54 chr5 31687604 31687862 -167942288 + L1ME3A LINE L1 5285 5546 -618 604 231 62 0 chr5 31687985 31688115 -167942035 + MER58C DNA MER1_type 34 171 -44 1503 218 66 48 chr5 31688143 31688640 -167941510 + L1ME3A LINE L1 5650 6165 -2 316 216 54 0 chr5 31690058 31690132 -167940018 - MIR SINE MIR -108 154 77 2123 103 10 0 chr5 31690459 31690751 -167939399 - AluSx SINE Alu -17 295 1 1512 159 19 30 chr5 31691070 31691372 -167938778 + AluJo SINE Alu 14 312 0 786 194 133 0 chr5 31691387 31691567 -167938583 + MER3 DNA MER1_type 6 209 0 280 200 0 0 chr5 31691525 31691575 -167938575 - MER3 DNA MER1_type -120 89 40 * 2117 104 0 0 chr5 31692676 31692964 -167937186 - AluSx SINE Alu -23 289 2 186 43 0 0 chr5 31693304 31693327 -167936823 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 909 229 0 0 chr5 31693328 31693494 -167936656 - FRAM SINE Alu 0 166 1 401 171 0 0 chr5 31693965 31694041 -167936109 - MER116 DNA Mariner -4 76 1 390 242 58 25 chr5 31694520 31694640 -167935510 + MIR SINE MIR 94 217 -45 2079 134 0 10 chr5 31694831 31695145 -167935005 - AluJb SINE Alu -1 311 1 23 54 0 0 chr5 31695263 31695300 -167934850 + AT_rich Low_complexity Low_complexity 1 37 0 257 343 37 22 chr5 31695388 31695522 -167934628 - MIR SINE MIR -119 143 8 1680 159 18 0 chr5 31695740 31696017 -167934133 - AluJo SINE Alu -30 282 1 1875 133 0 33 chr5 31697327 31697628 -167932522 + AluSx SINE Alu 1 291 -21 23 0 0 0 chr5 31698876 31698899 -167931251 + AT_rich Low_complexity Low_complexity 1 23 0 2273 85 0 16 chr5 31698903 31699210 -167930940 + AluSq SINE Alu 1 302 -11 296 218 245 20 chr5 31701121 31701268 -167928882 + MIR SINE MIR 82 261 -1 242 330 64 18 chr5 31701914 31702023 -167928127 + MIR3 SINE MIR 77 190 -18 797 178 0 0 chr5 31702160 31702278 -167927872 + FLAM_C SINE Alu 1 118 -15 645 148 96 26 chr5 31702471 31702586 -167927564 - FLAM_C SINE Alu -16 127 5 2073 127 0 0 chr5 31702923 31703223 -167926927 - AluJb SINE Alu -12 300 1 1823 118 40 0 chr5 31703557 31703863 -167926287 - AluSx SINE Alu 0 317 1 283 254 30 15 chr5 31704153 31704220 -167925930 - L2 LINE L2 -4 3268 3201 404 311 29 62 chr5 31704484 31704728 -167925422 - L3 LINE CR1 -555 1022 787 2186 109 0 3 chr5 31704768 31705072 -167925078 - AluSx SINE Alu -9 303 1 2016 133 0 0 chr5 31705215 31705517 -167924633 + AluSx SINE Alu 1 302 -10 1928 133 7 3 chr5 31705547 31705847 -167924303 + AluSx SINE Alu 1 301 -11 2009 96 7 4 chr5 31706272 31706553 -167923597 + AluSq SINE Alu 1 282 -31 216 0 0 0 chr5 31706554 31706578 -167923572 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 1879 136 3 11 chr5 31706586 31706872 -167923278 + AluSx SINE Alu 1 284 -28 1800 213 97 18 chr5 31708351 31708848 -167921302 + L1MC4 LINE L1 7129 7664 -378 288 312 13 0 chr5 31709050 31709127 -167921023 - MER5C DNA MER1_type -245 79 2 1000 215 40 15 chr5 31709207 31709360 -167920790 + L1MC4 LINE L1 7759 7924 -118 186 103 0 0 chr5 31709360 31709389 -167920761 + (TG)n Simple_repeat Simple_repeat 2 30 0 1000 215 40 15 chr5 31709389 31709509 -167920641 + L1MC4 LINE L1 7924 8039 -3 2192 101 7 0 chr5 31709512 31709810 -167920340 + AluSg SINE Alu 1 300 -10 1763 101 90 0 chr5 31711239 31711506 -167918644 + AluSp SINE Alu 1 291 -22 1876 90 0 0 chr5 31712974 31713219 -167916931 + AluSx SINE Alu 1 245 -67 2223 94 0 3 chr5 31715338 31715637 -167914513 - AluSx SINE Alu -14 298 1 198 288 119 34 chr5 31715748 31715866 -167914284 + MIR SINE MIR 2 129 -133 277 240 40 40 chr5 31715901 31715976 -167914174 + L1ME4a LINE L1 5974 6048 -73 2415 101 0 0 chr5 31716529 31716837 -167913313 + AluSx SINE Alu 1 308 -4 21 57 0 0 chr5 31716875 31716910 -167913240 + AT_rich Low_complexity Low_complexity 1 35 0 682 153 8 17 chr5 31717140 31717258 -167912892 - L1MB5 LINE L1 -3 6171 6055 217 359 111 8 chr5 31717768 31717885 -167912265 - MIR SINE MIR -63 145 17 2410 91 7 0 chr5 31718198 31718507 -167911643 + AluSq SINE Alu 1 311 -2 2266 115 0 13 chr5 31718885 31719197 -167910953 + AluSg SINE Alu 2 309 -1 825 177 63 32 chr5 31719199 31719357 -167910793 + AluJo/FRAM SINE Alu 131 293 -19 2172 116 3 13 chr5 31719514 31719825 -167910325 + AluSx SINE Alu 5 312 0 2407 79 0 13 chr5 31720062 31720367 -167909783 + AluSq SINE Alu 1 301 -12 2541 72 0 3 chr5 31720604 31720910 -167909240 + AluY SINE Alu 1 305 -6 2984 71 8 5 chr5 31721238 31721632 -167908518 + L1PA10 LINE L1 5771 6165 -3 225 0 0 0 chr5 31722257 31722282 -167907868 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 2170 80 14 4 chr5 31722282 31722557 -167907593 - AluY SINE Alu -32 279 2 2334 103 0 0 chr5 31722562 31722863 -167907287 - AluSx SINE Alu -11 301 1 226 272 43 22 chr5 31723071 31723163 -167906987 + MIR SINE MIR 156 249 -13 233 196 0 36 chr5 31723243 31723299 -167906851 + L1MC4 LINE L1 6656 6709 -1333 270 246 70 53 chr5 31723540 31723711 -167906439 - L1ME4a LINE L1 -7 6114 5941 2208 100 0 17 chr5 31724220 31724520 -167905630 - AluSx SINE Alu -17 295 1 454 268 87 0 chr5 31724832 31725015 -167905135 + MIR SINE MIR 23 221 -41 2237 110 17 0 chr5 31725491 31725791 -167904359 - AluSx SINE Alu -7 305 1 1121 149 26 0 chr5 31725797 31725992 -167904158 - L1MA6 LINE L1 0 6300 6101 2386 88 3 3 chr5 31725992 31726286 -167903864 - AluSx SINE Alu -18 294 1 878 167 28 39 chr5 31726322 31726502 -167903648 - L1 LINE L1 -1439 4707 4530 509 96 27 0 chr5 31726943 31727016 -167903134 - L1MA6 LINE L1 -75 6225 6151 2165 86 0 47 chr5 31727202 31727532 -167902618 - AluSq SINE Alu 0 316 1 1159 175 51 27 chr5 31731743 31731823 -167898327 - L1MD3 LINE L1 -1 7994 7917 2607 66 0 0 chr5 31731823 31732126 -167898024 - AluSg SINE Alu -7 303 1 1159 175 51 27 chr5 31732126 31732302 -167897848 - L1MD3 LINE L1 -78 7917 7732 2284 107 0 0 chr5 31732535 31732834 -167897316 + AluSx SINE Alu 1 299 -13 2226 108 3 0 chr5 31732834 31733128 -167897022 + AluSx SINE Alu 1 296 -16 2471 174 5 18 chr5 31734002 31734239 -167895911 - Tigger2a DNA MER2_type -2276 432 202 2070 148 0 7 chr5 31734239 31734536 -167895614 + AluSx SINE Alu 1 295 -17 2471 174 5 18 chr5 31734536 31734736 -167895414 - Tigger2a DNA MER2_type -2506 202 1 1294 147 15 79 chr5 31735171 31735436 -167894714 + AluJo SINE Alu 51 298 -14 2328 72 0 34 chr5 31736262 31736583 -167893567 - AluY SINE Alu 0 311 2 2213 100 0 7 chr5 31736870 31737160 -167892990 - AluSx SINE Alu -24 288 1 1994 145 34 0 chr5 31737371 31737667 -167892483 - AluJb SINE Alu -6 306 1 2083 93 55 14 chr5 31738513 31738802 -167891348 + AluSx SINE Alu 1 301 -11 414 259 88 0 chr5 31740510 31740657 -167889493 + MER5B DNA MER1_type 19 178 0 669 230 126 0 chr5 31741926 31742100 -167888050 - MIR SINE MIR -59 203 8 441 204 150 26 chr5 31743345 31743458 -167886692 + FLAM_A SINE Alu 1 127 -6 254 273 40 10 chr5 31743649 31743748 -167886402 + L1MEc LINE L1 1259 1360 -5036 185 0 40 0 chr5 31743783 31743808 -167886342 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 928 174 7 0 chr5 31743817 31743972 -167886178 + FRAM SINE Alu 5 160 -16 261 239 206 43 chr5 31743989 31744198 -167885952 + HAL1 LINE L1 1404 1646 -861 537 133 0 0 chr5 31744668 31744743 -167885407 + AluS SINE Alu 2 76 -237 732 158 17 0 chr5 31744904 31745024 -167885126 - AluSg/x SINE Alu -18 294 173 1833 107 23 4 chr5 31745025 31745288 -167884862 + AluSx SINE Alu 44 311 -1 1901 156 7 0 chr5 31745395 31745684 -167884466 + AluJb SINE Alu 1 291 -21 225 0 0 0 chr5 31745684 31745709 -167884441 + (CAAT)n Simple_repeat Simple_repeat 1 25 0 279 305 88 25 chr5 31745709 31746027 -167884123 + L1ME LINE L1 5262 5599 -563 496 208 28 9 chr5 31746349 31746455 -167883695 - MLT1J LTR MaLR -3 508 401 3329 111 56 10 chr5 31746493 31746996 -167883154 - MER1A DNA MER1_type -1 526 1 363 274 9 44 chr5 31747022 31747135 -167883015 - MIR SINE MIR -70 192 84 1077 187 9 14 chr5 31747899 31748113 -167882037 + AluJo SINE Alu 86 298 -14 21 0 0 0 chr5 31750709 31750730 -167879420 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 31751423 31751451 -167878699 + AT_rich Low_complexity Low_complexity 1 28 0 2272 62 0 62 chr5 31752143 31752452 -167877698 + AluY SINE Alu 1 290 -21 499 161 0 0 chr5 31752993 31753080 -167877070 + AluS SINE Alu 2 88 -224 2523 64 3 0 chr5 31753492 31753789 -167876361 + AluSc SINE Alu 1 298 -11 240 347 60 0 chr5 31754039 31754189 -167875961 + L1M4 LINE L1 3729 3887 -2259 2230 89 4 4 chr5 31754213 31754494 -167875656 + AluSx SINE Alu 1 281 -31 767 125 75 0 chr5 31754664 31754784 -167875366 - FLAM_C SINE Alu -13 130 2 2420 87 0 0 chr5 31754957 31755257 -167874893 - AluY SINE Alu -11 300 1 2237 90 0 7 chr5 31755260 31755549 -167874601 - AluSc SINE Alu -14 295 9 354 299 105 36 chr5 31755660 31755994 -167874156 + L1M4 LINE L1 4454 4810 -1336 205 195 0 0 chr5 31756212 31756253 -167873897 + A-rich Low_complexity Low_complexity 2 42 0 302 0 26 0 chr5 31756463 31756501 -167873649 + (CA)n Simple_repeat Simple_repeat 2 40 0 1936 156 0 23 chr5 31757097 31757405 -167872745 + AluJo SINE Alu 1 301 -11 495 265 118 79 chr5 31757816 31758106 -167872044 + HAL1b LINE L1 222 499 -849 2279 89 3 3 chr5 31758106 31758398 -167871752 + AluSg SINE Alu 1 292 -18 495 265 118 79 chr5 31758398 31758699 -167871451 + HAL1b LINE L1 499 836 -512 1925 168 0 3 chr5 31758908 31759206 -167870944 + AluJo SINE Alu 1 297 -15 508 162 36 102 chr5 31759258 31759301 -167870849 - L1MB3 LINE L1 -2 6181 6137 2385 79 7 0 chr5 31759301 31759591 -167870559 - AluSg1 SINE Alu -17 292 1 508 162 36 102 chr5 31759591 31759674 -167870476 - L1MB3 LINE L1 -46 6137 6066 2248 121 0 0 chr5 31759674 31759972 -167870178 - AluSx SINE Alu -14 298 1 508 162 36 102 chr5 31759972 31760011 -167870139 - L1MB3 LINE L1 -117 6066 6026 2378 183 79 82 chr5 31760066 31760372 -167869778 + L1MC5 LINE L1 6649 6955 -1006 1697 165 57 20 chr5 31760372 31760778 -167869372 + L1MA7 LINE L1 5865 6285 -6 2378 183 79 82 chr5 31760778 31760982 -167869168 + L1MC5 LINE L1 6955 7158 -803 2185 104 0 26 chr5 31760982 31761290 -167868860 + AluSg SINE Alu 1 300 -10 2327 57 13 57 chr5 31761295 31761610 -167868540 + AluY SINE Alu 2 302 -9 2378 183 79 82 chr5 31761610 31761978 -167868172 + L1MC5 LINE L1 7162 7531 -430 301 265 43 60 chr5 31762014 31762131 -167868019 + L1ME3A LINE L1 5967 6081 -89 1740 136 123 7 chr5 31762603 31762904 -167867246 + MER1B DNA MER1_type 2 337 0 280 293 193 27 chr5 31762909 31763274 -167866876 + L1MC/D LINE L1 5491 5915 -321 666 219 58 13 chr5 31765000 31765155 -167864995 + MER58A DNA MER1_type 46 207 -17 533 181 145 7 chr5 31767792 31767930 -167862220 + L1ME4a LINE L1 5962 6118 -3 717 200 171 0 chr5 31768039 31768209 -167861941 - MER3 DNA MER1_type -3 206 8 1215 299 68 39 chr5 31768361 31768919 -167861231 + L1MEc LINE L1 109 696 -5700 2037 123 0 25 chr5 31768919 31769237 -167860913 + AluSq SINE Alu 1 310 -3 1215 299 68 39 chr5 31769237 31769431 -167860719 + L1MEc LINE L1 696 883 -5513 481 152 20 61 chr5 31769433 31769532 -167860618 + AluJ SINE Alu 85 179 -133 1592 89 9 22 chr5 31769533 31769757 -167860393 + AluSq SINE Alu 93 313 0 534 251 98 6 chr5 31769771 31769934 -167860216 + MIR SINE MIR 85 262 0 2428 78 0 0 chr5 31770389 31770682 -167859468 - AluY SINE Alu -18 293 1 603 110 110 0 chr5 31770851 31770951 -167859199 + AluJ SINE Alu 183 293 -19 311 357 14 21 chr5 31771315 31771455 -167858695 + L2 LINE L2 3134 3272 0 289 266 43 0 chr5 31771461 31771555 -167858595 + MIR SINE MIR 47 144 -118 298 167 106 15 chr5 31771557 31771623 -167858527 - LTR16A1 LTR ERVL -2 455 384 2217 86 3 80 chr5 31771954 31772101 -167858049 + AluSx SINE Alu 1 109 -203 2475 45 25 0 chr5 31772101 31772387 -167857763 + AluSp SINE Alu 2 294 -19 2217 86 3 80 chr5 31772387 31772575 -167857575 + AluSx SINE Alu 109 310 -2 810 221 55 3 chr5 31772747 31772940 -167857210 - MLT1F1 LTR MaLR -298 251 7 2516 60 0 3 chr5 31773055 31773353 -167856797 - AluY SINE Alu -14 297 1 1466 137 9 5 chr5 31775170 31775389 -167854761 + AluJb SINE Alu 87 306 -6 21 57 0 0 chr5 31775426 31775461 -167854689 + AT_rich Low_complexity Low_complexity 1 35 0 394 147 0 0 chr5 31775928 31776003 -167854147 + L1MB3 LINE L1 6108 6182 -1 24 32 0 0 chr5 31776089 31776120 -167854030 + AT_rich Low_complexity Low_complexity 1 31 0 334 235 221 7 chr5 31776752 31776888 -167853262 + Charlie7 DNA MER1_type 37 201 -2411 483 212 8 17 chr5 31776951 31777069 -167853081 + Charlie7 DNA MER1_type 329 445 -2167 21 36 0 0 chr5 31777272 31777300 -167852850 + AT_rich Low_complexity Low_complexity 1 28 0 970 191 35 111 chr5 31777300 31777424 -167852726 + AluJo SINE Alu 1 133 -169 1942 155 0 10 chr5 31777424 31777720 -167852430 - AluSx SINE Alu -19 293 1 970 191 35 111 chr5 31777720 31777910 -167852240 + AluJo SINE Alu 133 291 -11 484 143 66 11 chr5 31777936 31778027 -167852123 + HY3 scRNA scRNA 3 98 -3 1107 299 124 0 chr5 31778154 31778509 -167851641 + MLT1I LTR MaLR 7 405 -4 1765 166 28 0 chr5 31779095 31779384 -167850766 + AluSx SINE Alu 1 297 -15 2431 80 0 3 chr5 31779394 31779694 -167850456 + AluSq SINE Alu 1 299 -14 1025 174 135 0 chr5 31779844 31780051 -167850099 + MER46A DNA MER2_type 1 235 -1 2099 123 10 7 chr5 31780153 31780455 -167849695 - AluSp SINE Alu -10 303 1 2172 123 0 0 chr5 31780573 31780866 -167849284 + AluSq SINE Alu 1 293 -20 2265 117 0 0 chr5 31781097 31781395 -167848755 - AluSg SINE Alu -8 302 5 23 0 0 0 chr5 31781474 31781497 -167848653 + AT_rich Low_complexity Low_complexity 1 23 0 674 171 105 106 chr5 31781524 31781566 -167848584 - MER33 DNA MER1_type -2267 318 277 1090 58 0 7 chr5 31781566 31781736 -167848414 - L1PA4 LINE L1 0 6155 6003 674 171 105 106 chr5 31781736 31782046 -167848104 - MER33 DNA MER1_type -2308 277 1 1294 174 8 2 chr5 31782350 31782619 -167847531 - MER2 DNA MER2_type -24 321 2 209 310 103 41 chr5 31782645 31782790 -167847360 + L2 LINE L2 2599 2752 -562 474 246 161 0 chr5 31782943 31783167 -167846983 + HAL1 LINE L1 863 1122 -1385 396 229 124 67 chr5 31783213 31783419 -167846731 + HAL1 LINE L1 1258 1484 -1023 1138 181 110 79 chr5 31783419 31783571 -167846579 + AluJb SINE Alu 1 147 -155 1969 117 19 45 chr5 31783571 31783879 -167846271 + AluSx SINE Alu 1 300 -12 1138 181 110 79 chr5 31783879 31784018 -167846132 + AluJb SINE Alu 147 301 -1 396 229 124 67 chr5 31784018 31784078 -167846072 + HAL1 LINE L1 1484 1539 -968 2031 140 0 3 chr5 31784078 31784378 -167845772 + AluSx SINE Alu 1 299 -13 9073 21 4 272 chr5 31784774 31786659 -167843491 + SVA Other Other 7 1386 0 29 0 0 0 chr5 31786659 31786688 -167843462 + AT_rich Low_complexity Low_complexity 1 29 0 1348 196 16 8 chr5 31787525 31787780 -167842370 + AluJo SINE Alu 26 282 -30 2022 146 7 3 chr5 31789200 31789501 -167840649 + AluJb SINE Alu 1 302 -10 311 242 40 74 chr5 31789910 31789999 -167840151 + L1ME4a LINE L1 5822 5906 -215 1328 123 76 0 chr5 31789999 31790210 -167839940 + MER30 DNA MER1_type 4 230 0 311 242 40 74 chr5 31790210 31790269 -167839881 + L1ME4a LINE L1 5906 5965 -156 689 121 0 0 chr5 31790547 31790646 -167839504 + AluSc SINE Alu 205 303 -6 191 200 200 0 chr5 31791129 31791189 -167838961 + MIR SINE MIR 174 245 -17 463 268 189 25 chr5 31791219 31791499 -167838651 - MER102a DNA MER1_type -3 327 2 1297 121 16 5 chr5 31791684 31791701 -167838449 + AluSq SINE Alu 113 128 -185 2330 85 0 19 chr5 31791701 31792017 -167838133 + AluY SINE Alu 1 310 -1 1297 121 16 5 chr5 31792017 31792189 -167837961 + AluSq SINE Alu 128 304 -9 245 111 222 0 chr5 31792474 31792528 -167837622 + MLT1F1 LTR MaLR 502 567 0 822 198 88 10 chr5 31792528 31792720 -167837430 + L1MB8 LINE L1 5972 6178 0 1987 116 46 0 chr5 31792907 31793192 -167836958 + AluSx SINE Alu 1 298 -14 259 293 111 60 chr5 31793194 31793811 -167836339 + L1M4 LINE L1 4191 4869 -1277 1138 176 72 9 chr5 31793811 31794033 -167836117 - MER46A DNA MER2_type 0 236 1 259 293 111 60 chr5 31794033 31794304 -167835846 + L1M4 LINE L1 4869 5125 -1021 27 51 0 17 chr5 31794411 31794438 -167835712 + AT_rich Low_complexity Low_complexity 1 27 -31 1380 188 74 7 chr5 31794438 31794709 -167835441 + AluJo SINE Alu 1 289 -23 27 51 0 17 chr5 31794709 31794740 -167835410 + AT_rich Low_complexity Low_complexity 27 58 0 1920 141 55 69 chr5 31794903 31795321 -167834829 + L1MB3 LINE L1 5759 6170 -13 2339 101 0 0 chr5 31795321 31795618 -167834532 - AluSg SINE Alu -13 297 1 225 122 82 0 chr5 31795640 31795689 -167834461 + L1MC/D LINE L1 5423 5475 -2333 367 255 176 30 chr5 31796463 31796663 -167833487 - MIR SINE MIR -29 233 11 1643 141 177 3 chr5 31796734 31797039 -167833111 - MER46B DNA MER2_type 0 236 4 240 359 63 0 chr5 31797324 31797466 -167832684 - MIR SINE MIR -111 151 1 698 161 36 0 chr5 31797650 31797762 -167832388 + FRAM SINE Alu 43 158 -18 22 70 0 0 chr5 31797772 31797815 -167832335 + AT_rich Low_complexity Low_complexity 1 43 0 851 153 0 0 chr5 31797815 31797933 -167832217 - FLAM_C SINE Alu -25 118 1 250 316 92 0 chr5 31798112 31798188 -167831962 - L2 LINE L2 -2 3270 3188 2765 32 0 0 chr5 31798341 31798649 -167831501 + AluY SINE Alu 1 308 -3 1995 127 3 34 chr5 31798676 31798998 -167831152 + AluJo SINE Alu 1 312 0 2473 55 0 0 chr5 31799302 31799622 -167830528 + AluY SINE Alu 1 320 0 237 105 0 0 chr5 31799722 31799760 -167830390 + L1MA1 LINE L1 6265 6302 0 2477 64 0 0 chr5 31799767 31800062 -167830088 + AluY SINE Alu 1 295 -16 2597 53 0 0 chr5 31800353 31800653 -167829497 + AluY SINE Alu 1 300 -11 1749 118 91 8 chr5 31800950 31801213 -167828937 + AluSg SINE Alu 1 285 -25 21 0 0 0 chr5 31801220 31801241 -167828909 + AT_rich Low_complexity Low_complexity 1 21 0 540 224 73 44 chr5 31801795 31801952 -167828198 - MER106B DNA MER1_type 0 1059 908 2369 63 3 10 chr5 31801952 31802251 -167827899 - AluY SINE Alu -14 297 1 540 224 73 44 chr5 31802251 31802331 -167827819 - MER106B DNA MER1_type -151 908 2 29 47 0 0 chr5 31802385 31802428 -167827722 + AT_rich Low_complexity Low_complexity 1 43 0 2159 126 7 0 chr5 31802454 31802755 -167827395 - AluSx SINE Alu -6 306 4 2147 133 0 0 chr5 31802859 31803160 -167826990 + AluSx SINE Alu 1 301 -11 270 269 39 0 chr5 31803248 31803326 -167826824 + L2 LINE L2 3191 3271 -1 2075 121 31 0 chr5 31804093 31804382 -167825768 + AluSq SINE Alu 1 298 -15 2385 108 0 0 chr5 31804725 31805032 -167825118 - AluSq SINE Alu -6 307 1 1803 141 27 37 chr5 31805229 31805526 -167824624 + AluJo SINE Alu 1 294 -18 236 200 235 0 chr5 31805835 31805920 -167824230 - MARNA DNA Mariner -62 524 420 862 119 13 50 chr5 31806396 31806555 -167823595 + FRAM SINE Alu 1 40 0 1869 137 3 31 chr5 31806555 31806847 -167823303 + AluJb SINE Alu 4 287 -25 268 306 38 25 chr5 31807081 31807241 -167822909 + MARNA DNA Mariner 302 463 -123 24 67 0 0 chr5 31807658 31807703 -167822447 + AT_rich Low_complexity Low_complexity 1 45 0 544 191 296 32 chr5 31807710 31807930 -167822220 + L1ME3A LINE L1 5810 6087 -83 563 158 105 18 chr5 31808229 31808343 -167821807 + FLAM_A SINE Alu 5 128 -5 1494 93 69 5 chr5 31808742 31808958 -167821192 + MER30 DNA MER1_type 1 230 0 2334 92 0 3 chr5 31809226 31809532 -167820618 + AluSx SINE Alu 1 305 -7 2298 94 0 7 chr5 31809973 31810282 -167819868 + AluSc SINE Alu 1 307 -2 1078 65 79 0 chr5 31810282 31810421 -167819729 + AluSp SINE Alu 134 283 -30 42 20 0 0 chr5 31811318 31811367 -167818783 + GC_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr5 31811492 31811517 -167818633 + GC_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 31812801 31812826 -167817324 + AT_rich Low_complexity Low_complexity 1 25 0 2647 43 3 0 chr5 31813050 31813354 -167816796 - AluY SINE Alu -6 305 1 1086 152 11 0 chr5 31813458 31813636 -167816514 + FRAM SINE Alu 1 172 -4 2614 40 0 0 chr5 31813638 31813934 -167816216 + AluY SINE Alu 1 296 -15 810 221 55 3 chr5 31814049 31814242 -167815908 + MLT1F1 LTR MaLR 7 251 -298 2140 81 3 50 chr5 31814416 31814588 -167815562 - AluSx SINE Alu 0 307 128 219 36 0 0 chr5 31814588 31814616 -167815534 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2394 44 25 0 chr5 31814616 31814891 -167815259 - AluSp SINE Alu -30 283 2 2140 81 3 50 chr5 31814891 31815038 -167815112 - AluSx SINE Alu -177 130 1 298 167 106 15 chr5 31815369 31815435 -167814715 + LTR16A1 LTR ERVL 384 455 -2 331 234 43 0 chr5 31815437 31815531 -167814619 - MIR SINE MIR -118 144 47 311 357 14 21 chr5 31815537 31815677 -167814473 - L2 LINE L2 0 3272 3134 1737 120 51 55 chr5 31816044 31816336 -167813814 - AluJb SINE Alu -21 291 1 394 314 119 31 chr5 31816509 31816827 -167813323 - L2 LINE L2 -694 2620 2275 2345 92 0 19 chr5 31816836 31817151 -167812999 - AluSc SINE Alu 0 309 1 3344 183 57 28 chr5 31817295 31817538 -167812612 - L1MD2 LINE L1 -23 6336 6102 1869 154 13 19 chr5 31817538 31817850 -167812300 + AluJo SINE Alu 1 310 -2 3344 183 57 28 chr5 31817850 31818235 -167811915 - L1MD2 LINE L1 -257 6102 5682 2171 115 3 0 chr5 31818235 31818246 -167811904 - AluSx SINE Alu 0 312 303 181 0 0 0 chr5 31818246 31818266 -167811884 + (TTG)n Simple_repeat Simple_repeat 2 180 0 2171 115 3 0 chr5 31818266 31818549 -167811601 - AluSx SINE Alu -9 303 1 3344 183 57 28 chr5 31818549 31818639 -167811511 - L1MD2 LINE L1 -677 5682 5596 363 135 0 0 chr5 31818705 31818757 -167811393 - L1MD2 LINE L1 -650 5592 5541 1504 103 42 0 chr5 31818905 31819119 -167811031 + MSTC LTR MaLR 1 223 -205 272 231 29 4 chr5 31819121 31819225 -167810925 - MIR SINE MIR -104 158 15 2055 218 77 61 chr5 31819428 31819595 -167810555 + MLT1E1 LTR MaLR 5 168 -486 2360 80 0 0 chr5 31819595 31819882 -167810268 + AluY SINE Alu 5 291 -20 2055 218 77 61 chr5 31819882 31819932 -167810218 + MLT1E1 LTR MaLR 168 216 -438 1779 163 108 44 chr5 31819932 31819987 -167810163 + MSTB1 LTR MaLR 1 51 -381 2060 142 0 22 chr5 31819987 31820304 -167809846 + AluJb SINE Alu 1 310 -2 1779 163 108 44 chr5 31820304 31820654 -167809496 + MSTB1 LTR MaLR 51 432 0 2055 218 77 61 chr5 31820654 31821060 -167809090 + MLT1E1 LTR MaLR 216 639 -15 380 220 110 0 chr5 31821060 31821178 -167808972 + L1MC4a LINE L1 2258 2388 -3758 2457 79 7 0 chr5 31821197 31821501 -167808649 - AluY SINE Alu -5 306 1 1359 179 38 60 chr5 31821502 31821762 -167808388 + L1MC4a LINE L1 4837 5101 -1045 2108 153 0 3 chr5 31821762 31822075 -167808075 - AluSx SINE Alu 0 312 1 1359 179 38 60 chr5 31822075 31822165 -167807985 + L1MC4a LINE L1 5101 5181 -965 2321 102 0 0 chr5 31822165 31822460 -167807690 + AluSg1 SINE Alu 1 295 -14 1359 179 38 60 chr5 31822460 31822476 -167807674 + L1MC4a LINE L1 5181 5196 -950 2299 125 0 0 chr5 31822484 31822796 -167807354 + AluSx SINE Alu 1 312 0 367 226 24 0 chr5 31822806 31822890 -167807260 + L1MC4a LINE L1 5171 5256 -890 2350 130 15 44 chr5 31822890 31823090 -167807060 + MSTB LTR MaLR 1 184 -242 2959 10 0 0 chr5 31823090 31823403 -167806747 + AluYb8 SINE Alu 1 313 -5 2350 130 15 44 chr5 31823403 31823610 -167806540 + MSTB LTR MaLR 184 396 -30 1086 172 0 20 chr5 31823611 31823809 -167806341 - AluJb SINE Alu -3 309 116 743 168 0 0 chr5 31823880 31823993 -167806157 + FLAM_C SINE Alu 21 133 -10 1942 129 17 20 chr5 31824158 31824452 -167805698 + AluJb SINE Alu 5 297 -15 2772 171 9 42 chr5 31824497 31824526 -167805624 + L1 LINE L1 4452 4480 -1666 2317 84 0 7 chr5 31824526 31824830 -167805320 - AluSg SINE Alu 0 302 1 1960 133 24 7 chr5 31824832 31825126 -167805024 - AluSx SINE Alu -13 299 1 2772 171 9 42 chr5 31825126 31825670 -167804480 + L1 LINE L1 4481 5010 -1136 248 219 62 0 chr5 31825673 31825737 -167804413 + L1MB7 LINE L1 6110 6177 -7 2132 122 3 0 chr5 31826281 31826576 -167803574 + AluSg SINE Alu 1 296 -14 2234 97 0 4 chr5 31826865 31827180 -167802970 - AluSx SINE Alu 0 318 5 2429 79 0 0 chr5 31827348 31827652 -167802498 + AluY SINE Alu 7 310 -1 1569 264 114 20 chr5 31827774 31828267 -167801883 - MLT1E LTR MaLR -52 541 3 2297 106 0 0 chr5 31828363 31828656 -167801494 - AluSx SINE Alu -19 293 1 860 249 175 25 chr5 31828714 31829108 -167801042 - MLT1H LTR MaLR -6 543 91 2273 120 0 0 chr5 31829332 31829641 -167800509 - AluSx SINE Alu -3 309 1 1698 271 56 4 chr5 31829691 31830156 -167799994 + L1MC4a LINE L1 5479 5967 -1841 2401 82 0 7 chr5 31830163 31830455 -167799695 - AluSg SINE Alu -20 290 1 24 67 0 0 chr5 31830609 31830654 -167799496 + AT_rich Low_complexity Low_complexity 1 45 0 2448 85 0 0 chr5 31830660 31830966 -167799184 - AluSc SINE Alu -3 306 1 908 142 49 59 chr5 31830978 31831208 -167798942 - L1MB8 LINE L1 -1 6183 5938 644 26 0 0 chr5 31831788 31831866 -167798284 - L1PA2 LINE L1 -3 6152 6075 2594 61 0 3 chr5 31832399 31832711 -167797439 + AluY SINE Alu 1 311 0 2495 94 0 0 chr5 31833107 31833415 -167796735 + AluSx SINE Alu 1 308 -4 355 235 20 0 chr5 31833591 31833689 -167796461 - L1MC4a LINE L1 -1897 5911 5812 294 196 0 0 chr5 31833691 31833742 -167796408 - L1PB4 LINE L1 -12 6144 6094 283 278 95 15 chr5 31833743 31833915 -167796235 - L1MB8 LINE L1 -477 5828 5638 1846 150 0 11 chr5 31833958 31834269 -167795881 - AluJb SINE Alu 0 308 1 2374 91 0 7 chr5 31834344 31834651 -167795499 - AluSx SINE Alu -7 305 1 2192 107 10 3 chr5 31834934 31835244 -167794906 + AluSx SINE Alu 1 312 0 2378 96 0 0 chr5 31835353 31835654 -167794496 - AluSq SINE Alu -12 301 1 22 0 0 0 chr5 31835837 31835859 -167794291 + AT_rich Low_complexity Low_complexity 1 22 0 2029 125 0 16 chr5 31836143 31836446 -167793704 - AluSx SINE Alu -12 300 3 240 35 0 0 chr5 31836939 31836968 -167793182 + (TG)n Simple_repeat Simple_repeat 2 30 0 2509 72 3 0 chr5 31837031 31837338 -167792812 - AluSx SINE Alu -4 308 1 410 119 13 0 chr5 31837449 31837525 -167792625 - L1P5 LINE L1 -703 5451 5375 265 234 0 16 chr5 31837520 31837584 -167792566 + L1ME4a LINE L1 5598 5660 -461 * 351 0 0 0 chr5 31837584 31837623 -167792527 + (CA)n Simple_repeat Simple_repeat 2 40 0 301 269 83 0 chr5 31837738 31837846 -167792304 + L1ME4a LINE L1 6003 6119 -2 408 217 5 13 chr5 31837979 31838069 -167792081 + L1MC4a LINE L1 6699 6776 -1032 414 128 51 0 chr5 31839274 31839352 -167790798 + AluJ/FRAM SINE Alu 231 312 0 262 227 0 30 chr5 31840553 31840619 -167789531 + MIR SINE MIR 127 190 -72 192 77 0 0 chr5 31841383 31841409 -167788741 + (A)n Simple_repeat Simple_repeat 1 26 0 1345 133 39 29 chr5 31841708 31841987 -167788163 - AluY SINE Alu -29 282 1 2501 241 65 16 chr5 31841987 31842844 -167787306 - L1MC4 LINE L1 -76 7966 7068 467 17 17 0 chr5 31842867 31842927 -167787223 - AluSc SINE Alu -14 295 235 1665 128 0 0 chr5 31843040 31843267 -167786883 - AluSx SINE Alu -85 227 1 222 224 0 52 chr5 31843712 31843770 -167786380 + MIR SINE MIR 28 82 -180 297 217 224 42 chr5 31843897 31844040 -167786110 + MIR SINE MIR 31 199 -63 33 43 0 0 chr5 31846217 31846264 -167783886 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr5 31846555 31846583 -167783567 + AT_rich Low_complexity Low_complexity 1 28 0 1724 141 4 23 chr5 31847067 31847330 -167782820 - AluSx SINE Alu -54 258 1 1338 140 169 33 chr5 31847330 31847551 -167782599 - MLT1A1 LTR MaLR -55 310 44 2230 92 6 16 chr5 31847551 31847866 -167782284 - AluSp SINE Alu -1 312 1 1338 140 169 33 chr5 31847866 31847916 -167782234 - MLT1A1 LTR MaLR -321 44 2 249 129 145 32 chr5 31848001 31848064 -167782086 - L1MB7 LINE L1 0 6178 6110 353 171 105 19 chr5 31848069 31848174 -167781976 + FLAM_C SINE Alu 18 131 -2 239 222 210 57 chr5 31848490 31848666 -167781484 + L1MC4 LINE L1 5713 5915 -1893 890 251 47 55 chr5 31850397 31850759 -167779391 + L1MC4 LINE L1 6700 7058 -984 1635 182 120 8 chr5 31850875 31851259 -167778891 - Charlie4a DNA MER1_type -80 428 2 2156 102 3 48 chr5 31851409 31851724 -167778426 + AluSg SINE Alu 1 301 -9 1085 214 12 20 chr5 31851800 31852052 -167778098 - AluJo SINE Alu -12 300 51 1237 284 102 22 chr5 31852363 31852950 -167777200 - L1MC4a LINE L1 -1736 6072 5439 1513 128 3 42 chr5 31852966 31853254 -167776896 - AluSx SINE Alu -35 277 1 2407 79 0 13 chr5 31853491 31853796 -167776354 - AluSq SINE Alu -12 301 1 2137 115 3 16 chr5 31854033 31854345 -167775805 - AluSx SINE Alu 0 312 5 833 177 63 32 chr5 31854501 31854659 -167775491 - AluJo/FRAM SINE Alu -19 293 131 2220 116 3 10 chr5 31854661 31854971 -167775179 - AluSg SINE Alu -1 309 2 1791 126 9 52 chr5 31855344 31855670 -167774480 - AluSq SINE Alu -1 312 1 4675 95 5 0 chr5 31855670 31856272 -167773878 - THE1A-int LTR MaLR -719 861 257 252 87 0 87 chr5 31856261 31856307 -167773843 - THE1A-int LTR MaLR -1516 64 23 * 263 113 19 57 chr5 31856347 31856400 -167773750 - THE1A LTR MaLR -2 353 303 198 167 0 0 chr5 31856868 31856904 -167773246 + GA-rich Low_complexity Low_complexity 2 37 0 3408 233 43 45 chr5 31856904 31857046 -167773104 + L1MC4 LINE L1 6916 7057 -985 2268 86 3 17 chr5 31857046 31857348 -167772802 + AluSg SINE Alu 1 298 -12 3408 233 43 45 chr5 31857348 31858247 -167771903 + L1MC4 LINE L1 7057 7956 -86 2271 105 0 13 chr5 31858247 31858551 -167771599 + AluY SINE Alu 1 300 -11 3408 233 43 45 chr5 31858551 31858633 -167771517 + L1MC4 LINE L1 7956 8037 -5 2188 131 7 0 chr5 31859056 31859361 -167770789 - AluSx SINE Alu -5 307 1 27 0 0 0 chr5 31910641 31910668 -167719482 + AT_rich Low_complexity Low_complexity 1 27 0 183 80 0 0 chr5 31913128 31913153 -167716997 + (A)n Simple_repeat Simple_repeat 1 25 0 383 55 0 18 chr5 31913691 31913746 -167716404 + (GGGA)n Simple_repeat Simple_repeat 1 54 0 24 0 0 0 chr5 31914128 31914152 -167715998 + AT_rich Low_complexity Low_complexity 1 24 0 186 156 0 0 chr5 31914722 31914767 -167715383 + G-rich Low_complexity Low_complexity 1 45 0 238 330 0 0 chr5 31919106 31919203 -167710947 + G-rich Low_complexity Low_complexity 1 97 0 198 91 0 0 chr5 31919339 31919372 -167710778 + (TAAAAA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr5 31919695 31919720 -167710430 + AT_rich Low_complexity Low_complexity 1 25 0 234 0 0 0 chr5 31927698 31927724 -167702426 + (G)n Simple_repeat Simple_repeat 1 26 0 284 145 0 16 chr5 31939562 31939624 -167690526 + (CTG)n Simple_repeat Simple_repeat 2 62 0 234 0 0 0 chr5 31941589 31941615 -167688535 + (G)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr5 31943193 31943214 -167686936 + GC_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr5 31946934 31946960 -167683190 + (A)n Simple_repeat Simple_repeat 1 26 0 1539 52 0 0 chr5 31951213 31951385 -167678765 - AluSx SINE Alu -140 172 1 955 155 23 11 chr5 31951467 31951641 -167678509 + LTR1 LTR ERV1 48 223 -562 2019 120 3 19 chr5 31951641 31951950 -167678200 + AluSg SINE Alu 1 304 -6 3038 107 25 19 chr5 31952161 31952646 -167677504 + LTR1 LTR ERV1 298 785 0 1979 151 0 22 chr5 31952705 31953022 -167677128 - AluSx SINE Alu 0 312 3 1905 115 38 7 chr5 31956534 31956821 -167673329 + AluSg SINE Alu 1 296 -14 440 243 88 15 chr5 31957381 31957517 -167672633 - MIR SINE MIR -113 149 4 3158 141 2 80 chr5 31957572 31957836 -167672314 + LTR26B LTR ERV1 1 284 -247 354 23 0 0 chr5 31957836 31957879 -167672271 + (CA)n Simple_repeat Simple_repeat 2 44 0 3158 141 2 80 chr5 31957879 31958007 -167672143 + LTR26B LTR ERV1 284 336 -195 1667 204 11 0 chr5 31958007 31958291 -167671859 + AluJo SINE Alu 1 287 -25 3158 141 2 80 chr5 31958291 31958473 -167671677 + LTR26B LTR ERV1 336 531 0 255 255 0 142 chr5 31958694 31958762 -167671388 + MER45 DNA AcHobo 1 50 -903 1928 138 22 26 chr5 31958762 31959074 -167671076 + AluJo SINE Alu 1 311 -1 255 255 0 142 chr5 31959074 31959111 -167671039 + MER45 DNA AcHobo 50 91 -862 * 272 89 111 0 chr5 31959108 31959153 -167670997 - AluSp/q SINE Alu -27 276 227 3582 168 22 26 chr5 31959310 31959493 -167670657 - MER57B-int LTR ERV1 -4070 3467 3285 2041 142 0 7 chr5 31959493 31959788 -167670362 - AluSg SINE Alu -17 293 1 3582 168 22 26 chr5 31959788 31960293 -167669857 - MER57B-int LTR ERV1 -4252 3285 2782 821 126 13 33 chr5 31960294 31960445 -167669705 - MER57B-int LTR ERV1 -3933 2013 1866 * 4917 165 33 14 chr5 31960444 31960937 -167669213 - MER57B-int LTR ERV1 -5166 2371 1852 2226 76 45 10 chr5 31960937 31961228 -167668922 + AluSg SINE Alu 1 301 -9 4917 165 33 14 chr5 31961228 31961611 -167668539 - MER57B-int LTR ERV1 -5685 1852 1478 1283 91 0 6 chr5 31961639 31961815 -167668335 - MER57B-int LTR ERV1 -6570 967 793 * 2419 151 24 19 chr5 31961813 31962224 -167667926 - MER57B-int LTR ERV1 -6860 677 265 931 95 7 7 chr5 31962240 31962388 -167667762 - MER57B LTR ERV1 0 434 287 1696 146 91 40 chr5 31962395 31962724 -167667426 + MER41-int LTR ERV1 382 727 -5219 1240 144 0 0 chr5 31962723 31962911 -167667239 + MER41-int LTR ERV1 1404 1591 -4355 * 679 126 0 18 chr5 31962909 31963020 -167667130 + MER41-int LTR ERV1 2477 2585 -4952 * 21 0 0 0 chr5 31963611 31963632 -167666518 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr5 31964540 31964567 -167665583 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 31965121 31965149 -167665001 + AT_rich Low_complexity Low_complexity 1 28 0 574 295 60 0 chr5 31965149 31965315 -167664835 - MIR SINE MIR -42 220 45 1270 122 0 0 chr5 31968723 31968887 -167661263 + AluSq SINE Alu 133 296 -17 2040 130 13 29 chr5 31969174 31969481 -167660669 - AluSx SINE Alu -10 302 1 22 35 0 0 chr5 31970036 31970065 -167660085 + AT_rich Low_complexity Low_complexity 1 29 0 2389 82 20 3 chr5 31970549 31970852 -167659298 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr5 31971651 31971672 -167658478 + AT_rich Low_complexity Low_complexity 1 21 0 282 159 89 33 chr5 31973185 31973275 -167656875 - L1MC/D LINE L1 -378 5800 5715 2159 93 7 17 chr5 31973509 31973798 -167656352 + AluSx SINE Alu 2 287 -25 1435 98 221 4 chr5 31974020 31974255 -167655895 + AluSg1 SINE Alu 2 287 -22 284 102 20 0 chr5 31974255 31974304 -167655846 + (GA)n Simple_repeat Simple_repeat 1 50 0 640 110 0 0 chr5 31974318 31974409 -167655741 - AluY SINE Alu -5 306 216 4341 131 53 36 chr5 31974510 31974844 -167655306 + MER41B-int LTR ERV1 2867 3194 -4343 1829 139 34 4 chr5 31974844 31975111 -167655039 + AluSx SINE Alu 2 276 -36 4341 131 53 36 chr5 31975111 31975324 -167654826 + MER41B-int LTR ERV1 3194 3402 -4135 2086 136 3 16 chr5 31975324 31975460 -167654690 + AluSx SINE Alu 1 137 -175 2269 107 0 7 chr5 31975460 31975760 -167654390 + AluSc SINE Alu 1 298 -11 2086 136 3 16 chr5 31975760 31975932 -167654218 + AluSx SINE Alu 137 305 -7 2198 116 3 0 chr5 31975932 31976224 -167653926 + AluSc SINE Alu 1 293 -16 4341 131 53 36 chr5 31976224 31976432 -167653718 + MER41B-int LTR ERV1 3401 3637 -3900 726 94 31 94 chr5 31976420 31976476 -167653674 + MER41B-int LTR ERV1 3300 3358 -2588 * 676 19 65 0 chr5 31976476 31976584 -167653566 + (TCTA)n Simple_repeat Simple_repeat 4 118 0 2329 62 0 21 chr5 31976584 31976872 -167653278 - AluY SINE Alu -25 286 5 726 94 31 94 chr5 31976872 31976973 -167653177 + MER41B-int LTR ERV1 3356 3448 -2498 4669 108 18 5 chr5 31976977 31976997 -167653153 + MER41B-int LTR ERV1 2415 2433 -3513 2340 102 0 6 chr5 31976997 31977310 -167652840 - AluSq SINE Alu -2 311 1 4669 108 18 5 chr5 31977310 31978007 -167652143 + MER41B-int LTR ERV1 2433 4752 -1194 4919 86 8 24 chr5 31978012 31978714 -167651436 + MER41B-int LTR ERV1 5256 5946 0 4227 134 32 3 chr5 31978714 31979331 -167650819 + MER41B LTR ERV1 1 635 0 436 213 65 101 chr5 31979809 31979978 -167650172 - MER102b DNA MER1_type -10 331 169 2130 136 3 0 chr5 31979980 31980288 -167649862 - AluSx SINE Alu -3 309 1 2159 125 10 0 chr5 31980611 31980914 -167649236 + AluSx SINE Alu 1 306 -6 1577 137 15 8 chr5 31981217 31981479 -167648671 - AluSq SINE Alu -49 264 1 713 210 130 132 chr5 31981480 31982019 -167648131 + MER45C DNA AcHobo 96 633 -320 304 192 0 0 chr5 31982015 31982067 -167648083 + MER45C DNA AcHobo 900 951 -2 * 454 225 80 112 chr5 31982083 31982192 -167647958 + MIR SINE MIR 78 180 -82 3329 60 17 70 chr5 31982192 31982227 -167647923 - MLT2A1 LTR ERVL 0 444 409 396 59 0 0 chr5 31982227 31982278 -167647872 + (TA)n Simple_repeat Simple_repeat 1 51 0 3329 60 17 70 chr5 31982278 31982711 -167647439 - MLT2A1 LTR ERVL -35 409 1 454 225 80 112 chr5 31982711 31982788 -167647362 + MIR SINE MIR 180 258 -4 2377 100 0 0 chr5 31982967 31983277 -167646873 - AluY SINE Alu -1 310 1 1875 147 3 46 chr5 31983279 31983585 -167646565 - AluJb SINE Alu -19 293 1 6805 179 95 32 chr5 31983727 31985187 -167644963 - MER52A LTR ERV1 0 1755 204 269 220 0 0 chr5 31985544 31985603 -167644547 - MER52A LTR ERV1 -1696 59 1 1416 161 22 86 chr5 31985687 31985768 -167644382 + MLT1A1 LTR MaLR 1 86 -310 2263 63 70 0 chr5 31985768 31986054 -167644096 + AluSq SINE Alu 1 306 -7 1416 161 22 86 chr5 31986054 31986193 -167643957 + MLT1A1 LTR MaLR 86 231 -165 3663 92 4 48 chr5 31986193 31986632 -167643518 - LOR1a LTR ERV1 0 497 83 1871 137 3 48 chr5 31986632 31986947 -167643203 + AluJb SINE Alu 9 309 -3 3663 92 4 48 chr5 31986947 31987027 -167643123 - LOR1a LTR ERV1 -414 83 1 1416 161 22 86 chr5 31987027 31987135 -167643015 + MLT1A1 LTR MaLR 231 344 -52 1787 98 0 12 chr5 31987235 31987480 -167642670 - AluSq SINE Alu -71 242 1 850 170 157 0 chr5 31987569 31987728 -167642422 + MER8 DNA MER2_type 1 184 -55 25 51 0 0 chr5 31988221 31988260 -167641890 + AT_rich Low_complexity Low_complexity 1 39 0 435 108 40 14 chr5 31988562 31988636 -167641514 + L1PB3 LINE L1 6070 6145 -9 501 153 194 14 chr5 31988848 31988992 -167641158 + MER104 DNA Tc2 6 175 -5 692 129 86 9 chr5 31989127 31989243 -167640907 + FLAM_C SINE Alu 1 125 -8 594 173 40 1 chr5 31990387 31990502 -167639648 - L1MB7 LINE L1 -242 5942 5825 832 155 0 0 chr5 31990890 31991006 -167639144 - AluJo/FRAM SINE Alu -16 296 181 373 172 0 0 chr5 31991008 31991066 -167639084 + AluJo/FRAM SINE Alu 192 249 -53 817 163 71 0 chr5 31991068 31991209 -167638941 - AluJo SINE Alu -143 169 19 1023 169 23 23 chr5 31992211 31992383 -167637767 - FAM SINE Alu 0 175 4 1393 174 28 56 chr5 31992398 31992481 -167637669 - AluJo SINE Alu -12 300 216 2205 107 0 3 chr5 31992481 31992821 -167637329 + AluSq SINE Alu 1 339 0 1393 174 28 56 chr5 31992821 31993023 -167637127 - AluJo SINE Alu -96 216 21 268 146 0 0 chr5 31993023 31993064 -167637086 - AluJo SINE Alu -267 41 1 298 207 52 17 chr5 31993236 31993294 -167636856 - MIR SINE MIR -109 99 40 253 240 93 13 chr5 31993492 31993567 -167636583 + L1ME LINE L1 5515 5595 -526 1993 122 22 4 chr5 31993587 31993865 -167636285 - AluSp SINE Alu -30 283 1 411 294 15 15 chr5 31994051 31994187 -167635963 - MIR SINE MIR -1 261 126 982 217 157 5 chr5 31994776 31994815 -167635335 - L1MB5 LINE L1 -1 6183 6151 306 0 0 0 chr5 31994815 31994849 -167635301 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1665 191 0 20 chr5 31994853 31995147 -167635003 + AluJb SINE Alu 1 288 -24 982 217 157 5 chr5 31995147 31995417 -167634733 - L1MB5 LINE L1 -35 6149 5838 856 167 8 0 chr5 31995423 31995555 -167634595 - FLAM_A SINE Alu 0 133 1 399 21 0 0 chr5 31995640 31995688 -167634462 + (GA)n Simple_repeat Simple_repeat 1 48 0 228 67 0 0 chr5 31995696 31995726 -167634424 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 1604 191 0 24 chr5 31995726 31996006 -167634144 - AluJo SINE Alu -37 275 1 1611 213 0 0 chr5 31996417 31996708 -167633442 + AluJo SINE Alu 1 291 -21 649 151 134 0 chr5 31997627 31997746 -167632404 + L1MC1 LINE L1 6138 6272 -61 677 181 8 24 chr5 31997748 31997875 -167632275 + Tigger2a DNA MER2_type 3 127 -307 2105 144 0 6 chr5 31997880 31998192 -167631958 + AluSx SINE Alu 1 310 -2 2056 125 0 0 chr5 31998442 31998722 -167631428 + AluSg SINE Alu 1 280 -30 2000 125 11 0 chr5 31999553 31999869 -167630281 + AluSx SINE Alu 1 319 0 204 97 0 0 chr5 32000030 32000061 -167630089 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 301 291 103 41 chr5 32000249 32000619 -167629531 + L1M4 LINE L1 3580 3977 -2169 1602 172 15 4 chr5 32000857 32001125 -167629025 - AluJb SINE Alu -30 282 12 2248 86 7 7 chr5 32001177 32001469 -167628681 - AluSg SINE Alu -16 294 3 1467 117 162 23 chr5 32001695 32001961 -167628189 + AluSg SINE Alu 2 304 -6 994 145 52 17 chr5 32002050 32002222 -167627928 + AluSx SINE Alu 2 179 -133 1429 174 51 0 chr5 32002324 32002577 -167627573 + L1MB7 LINE L1 5919 6184 0 1501 151 37 74 chr5 32002633 32002957 -167627193 - AluJb SINE Alu 0 312 1 21 36 0 0 chr5 32002976 32003004 -167627146 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 32003642 32003668 -167626482 + AT_rich Low_complexity Low_complexity 1 26 0 451 243 42 13 chr5 32003862 32004052 -167626098 + MIR SINE MIR 13 262 0 750 233 157 38 chr5 32004662 32004949 -167625201 + L1MD2 LINE L1 5899 6219 -140 1928 134 30 13 chr5 32005494 32005792 -167624358 + AluSx SINE Alu 1 303 -9 1187 173 25 38 chr5 32006293 32006530 -167623620 + AluJo SINE Alu 1 234 -78 741 187 0 0 chr5 32006530 32006653 -167623497 + FLAM_C SINE Alu 15 137 -6 2078 218 127 17 chr5 32006653 32007180 -167622970 + L1MB7 LINE L1 5576 6160 -24 2309 89 20 3 chr5 32007435 32007739 -167622411 - AluSg SINE Alu -1 309 1 1436 97 116 5 chr5 32007984 32008191 -167621959 + MER30 DNA MER1_type 1 230 0 1216 172 161 0 chr5 32008200 32008467 -167621683 - AluJb SINE Alu -2 310 1 26 30 0 0 chr5 32008476 32008509 -167621641 + AT_rich Low_complexity Low_complexity 1 33 0 31 26 0 0 chr5 32008685 32008723 -167621427 + AT_rich Low_complexity Low_complexity 1 38 0 1935 64 113 0 chr5 32008763 32009029 -167621121 - AluY SINE Alu -15 296 1 2047 138 10 0 chr5 32009034 32009332 -167620818 - AluSx SINE Alu -11 301 1 376 284 55 28 chr5 32009391 32009609 -167620541 + L1MC/D LINE L1 4724 4947 -1199 2189 120 0 0 chr5 32009842 32010142 -167620008 + AluSx SINE Alu 1 300 -12 1305 138 146 16 chr5 32010152 32010406 -167619744 + AluJb SINE Alu 1 287 -25 306 326 107 67 chr5 32010482 32010689 -167619461 + L1MC/D LINE L1 5509 5731 -2077 2505 48 0 23 chr5 32010689 32010999 -167619151 + AluY SINE Alu 1 303 -8 306 326 107 67 chr5 32010999 32011061 -167619089 + L1MC/D LINE L1 5731 5789 -2019 953 132 220 0 chr5 32013302 32013484 -167616666 + MER46A DNA MER2_type 15 236 0 1937 134 17 10 chr5 32013595 32013886 -167616264 + AluJb SINE Alu 1 293 -19 236 273 133 35 chr5 32013893 32014036 -167616114 - MIR SINE MIR -6 256 100 1621 175 30 10 chr5 32014339 32014642 -167615508 - AluJo SINE Alu -3 309 1 1855 129 7 11 chr5 32014645 32014925 -167615225 - AluSx SINE Alu -13 299 21 2291 90 10 3 chr5 32015123 32015424 -167614726 + AluSq SINE Alu 1 303 -10 229 272 44 110 chr5 32015463 32015526 -167614624 - MER5A DNA MER1_type 0 189 138 809 174 8 0 chr5 32015526 32015647 -167614503 + FLAM_C SINE Alu 1 122 -11 229 272 44 110 chr5 32015647 32015719 -167614431 - MER5A DNA MER1_type -51 138 63 270 239 37 83 chr5 32015939 32016048 -167614102 - L1MC4a LINE L1 -1875 5933 5830 425 121 30 0 chr5 32016119 32016184 -167613966 + AluSp/q SINE Alu 232 298 -15 497 175 25 0 chr5 32016184 32016264 -167613886 + AluS SINE Alu 1 82 -230 2568 49 0 16 chr5 32016557 32016865 -167613285 + AluY SINE Alu 1 303 -8 372 152 0 0 chr5 32016929 32016995 -167613155 + (CA)n Simple_repeat Simple_repeat 2 67 0 672 254 112 9 chr5 32017030 32017262 -167612888 - MIR SINE MIR -5 257 2 210 287 176 9 chr5 32017968 32018076 -167612074 + L2 LINE L2 3182 3307 -6 423 281 132 38 chr5 32018099 32018334 -167611816 - MIR SINE MIR 0 262 6 2199 121 3 0 chr5 32018682 32018980 -167611170 + AluSx SINE Alu 1 299 -13 1867 132 57 10 chr5 32019498 32019794 -167610356 + AluSx SINE Alu 1 310 -2 221 0 0 33 chr5 32019836 32019866 -167610284 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2272 86 0 23 chr5 32020326 32020628 -167609522 + AluSg SINE Alu 1 295 -15 253 278 6 107 chr5 32020995 32021164 -167608986 - MIR SINE MIR 0 262 111 198 0 0 0 chr5 32021737 32021759 -167608391 + (A)n Simple_repeat Simple_repeat 1 22 0 2139 93 4 4 chr5 32021928 32022210 -167607940 + AluSc SINE Alu 1 279 -30 187 43 0 0 chr5 32022210 32022233 -167607917 + (GAAAA)n Simple_repeat Simple_repeat 2 115 0 2183 92 7 0 chr5 32022978 32023272 -167606878 - AluSg SINE Alu -14 296 1 222 254 0 153 chr5 32023439 32023509 -167606641 + L2 LINE L2 3214 3260 -53 2378 67 3 0 chr5 32023509 32023806 -167606344 + AluSp SINE Alu 1 298 -15 222 254 0 153 chr5 32023806 32023853 -167606297 + L2 LINE L2 3260 3313 0 552 276 145 41 chr5 32024063 32024284 -167605866 + MIR SINE MIR 19 262 0 354 259 69 74 chr5 32024540 32024729 -167605421 + MIR3 SINE MIR 10 197 -11 281 237 53 26 chr5 32024907 32025021 -167605129 + L1ME4a LINE L1 5843 5959 -162 2225 97 0 0 chr5 32025929 32026227 -167603923 + AluSg SINE Alu 1 298 -12 2216 88 0 14 chr5 32026493 32026790 -167603360 - AluSc SINE Alu -16 293 1 6218 104 42 47 chr5 32027214 32027550 -167602600 + L1MA3 LINE L1 5101 5437 -868 896 56 0 0 chr5 32027550 32027657 -167602493 + U6 snRNA snRNA 1 107 0 6218 104 42 47 chr5 32027657 32027921 -167602229 + L1MA3 LINE L1 5437 5701 -604 1518 186 45 3 chr5 32027921 32028211 -167601939 + AluJo SINE Alu 1 302 -10 6218 104 42 47 chr5 32028211 32028758 -167601392 + L1MA3 LINE L1 5701 6247 -58 2044 87 62 3 chr5 32028758 32029046 -167601104 - AluSx SINE Alu -7 305 1 6218 104 42 47 chr5 32029046 32029100 -167601050 + L1MA3 LINE L1 6247 6300 -5 970 265 191 28 chr5 32029509 32029990 -167600160 + L2 LINE L2 2749 3312 -1 29 70 0 0 chr5 32030586 32030643 -167599507 + GC_rich Low_complexity Low_complexity 1 57 0 2178 89 0 49 chr5 32031344 32031524 -167598626 - AluSq SINE Alu -3 310 123 315 0 0 0 chr5 32031524 32031559 -167598591 + (TG)n Simple_repeat Simple_repeat 2 36 0 1989 91 0 0 chr5 32031559 32031822 -167598328 - AluSg SINE Alu -42 268 6 2178 89 0 49 chr5 32031822 32031966 -167598184 - AluSq SINE Alu -188 125 1 1843 135 20 3 chr5 32032132 32032436 -167597714 + AluSx SINE Alu 3 311 -1 2259 83 10 0 chr5 32033191 32033493 -167596657 + AluSp SINE Alu 1 305 -8 1927 145 0 19 chr5 32033674 32033991 -167596159 + AluJo SINE Alu 1 311 -1 2052 115 6 10 chr5 32034341 32034653 -167595497 + AluSx SINE Alu 1 311 -1 3050 164 66 22 chr5 32034665 32034847 -167595303 - L1MB7 LINE L1 -22 6162 5989 2179 107 7 0 chr5 32034847 32035157 -167594993 - AluSx SINE Alu 0 312 1 3050 164 66 22 chr5 32035157 32035564 -167594586 - L1MB7 LINE L1 -195 5989 5547 180 312 52 13 chr5 32035795 32035872 -167594278 - MIR SINE MIR -58 204 125 1826 125 14 7 chr5 32036270 32036565 -167593585 - AluSx SINE Alu -10 302 6 265 309 24 0 chr5 32036566 32036650 -167593500 + L2 LINE L2 3228 3313 0 23 0 0 0 chr5 32036748 32036771 -167593379 + AT_rich Low_complexity Low_complexity 1 23 0 184 231 58 115 chr5 32036782 32036886 -167593264 + MER5A DNA MER1_type 92 189 0 1925 99 0 34 chr5 32037069 32037391 -167592759 - AluSx SINE Alu 0 312 1 365 261 0 11 chr5 32038235 32038323 -167591827 + MER5A DNA MER1_type 9 95 -94 346 315 123 0 chr5 32038439 32038569 -167591581 - MER5A DNA MER1_type -7 182 37 2071 129 0 0 chr5 32040358 32040660 -167589490 + AluSx SINE Alu 1 302 -10 276 30 0 0 chr5 32041047 32041080 -167589070 + (CA)n Simple_repeat Simple_repeat 2 34 0 1477 162 219 70 chr5 32041475 32041525 -167588625 - MLT1C LTR MaLR -6 461 420 3173 95 89 42 chr5 32041525 32042028 -167588122 - MER1A DNA MER1_type 0 527 1 1477 162 219 70 chr5 32042028 32042047 -167588103 - MLT1C LTR MaLR -47 420 405 1572 103 5 5 chr5 32042047 32042271 -167587879 - AluSq SINE Alu -4 309 86 1477 162 219 70 chr5 32042271 32042601 -167587549 - MLT1C LTR MaLR -62 405 1 2077 114 7 0 chr5 32042749 32043047 -167587103 - AluSp SINE Alu -13 300 1 886 122 8 8 chr5 32043143 32043274 -167586876 + FLAM_C SINE Alu 1 131 -2 306 312 100 30 chr5 32043401 32043568 -167586582 + MLT1L LTR MaLR 203 392 -223 1886 83 23 11 chr5 32043568 32043832 -167586318 - AluSx SINE Alu -11 301 35 306 312 100 30 chr5 32043832 32043895 -167586255 + MLT1L LTR MaLR 392 449 -166 1934 177 126 19 chr5 32043918 32044348 -167585802 + MLT1D LTR MaLR 30 505 0 278 271 15 68 chr5 32044362 32044495 -167585655 + MLT1L LTR MaLR 489 614 -1 2098 103 31 0 chr5 32044572 32044862 -167585288 - AluSq SINE Alu -14 299 1 381 259 83 24 chr5 32045014 32045249 -167584901 - MLT1J LTR MaLR -164 347 42 1900 139 13 10 chr5 32045464 32045766 -167584384 + AluJb SINE Alu 1 303 -9 503 304 58 12 chr5 32046391 32046562 -167583588 + MIR3 SINE MIR 22 200 -8 1125 167 142 0 chr5 32046901 32047141 -167583009 + AluJb SINE Alu 35 308 -4 2378 79 0 0 chr5 32047321 32047625 -167582525 + AluSg SINE Alu 2 305 -5 1743 140 0 42 chr5 32047825 32047992 -167582158 - AluJb SINE Alu -18 294 121 183 42 0 0 chr5 32047992 32048016 -167582134 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1595 118 68 54 chr5 32048016 32048296 -167581854 - AluSx SINE Alu -28 284 1 1743 140 0 42 chr5 32048296 32048434 -167581716 - AluJb SINE Alu -189 123 1 1581 180 42 67 chr5 32048705 32049154 -167580996 + LTR37B LTR ERV1 15 452 -16 195 129 0 0 chr5 32049168 32049199 -167580951 + (A)n Simple_repeat Simple_repeat 1 31 0 2280 82 0 20 chr5 32049240 32049545 -167580605 - AluSx SINE Alu -13 299 1 1832 183 49 9 chr5 32049567 32049895 -167580255 - MLT1A1 LTR MaLR -2 363 23 255 149 0 0 chr5 32049894 32049941 -167580209 + AluSp/q SINE Alu 253 299 -4 * 338 200 32 74 chr5 32049942 32050037 -167580113 - L1MC4 LINE L1 -1339 6703 6613 313 189 0 0 chr5 32050059 32050112 -167580038 + AluY SINE Alu 123 175 -126 737 174 49 7 chr5 32050113 32050257 -167579893 + AluJb SINE Alu 145 294 -18 731 305 120 19 chr5 32050278 32050692 -167579458 - L2 LINE L2 -66 3247 2797 25 0 0 0 chr5 32050760 32050785 -167579365 + AT_rich Low_complexity Low_complexity 1 25 0 1814 160 0 3 chr5 32050785 32051078 -167579072 - AluJb SINE Alu -20 292 1 1776 149 57 30 chr5 32051112 32051481 -167578669 - L1MD3 LINE L1 -81 7914 7536 2293 57 10 7 chr5 32051646 32051945 -167578205 - AluY SINE Alu -10 301 2 2054 106 0 10 chr5 32052028 32052321 -167577829 + AluSx SINE Alu 5 294 -18 340 298 100 35 chr5 32052510 32052763 -167577387 - L2 LINE L2 -247 3025 2760 306 271 89 94 chr5 32053089 32053239 -167576911 + L2 LINE L2 2067 2216 -1098 246 62 0 0 chr5 32053239 32053271 -167576879 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2014 116 0 0 chr5 32053273 32053557 -167576593 - AluSx SINE Alu -28 284 1 306 271 89 94 chr5 32053557 32053698 -167576452 + L2 LINE L2 2217 2357 -957 2352 73 0 3 chr5 32053698 32054000 -167576150 + AluY SINE Alu 1 301 -10 306 271 89 94 chr5 32054000 32054140 -167576010 + L2 LINE L2 2357 2500 -814 940 183 0 0 chr5 32054166 32054335 -167575815 - AluJ SINE Alu -15 297 129 683 149 9 0 chr5 32055710 32055817 -167574333 - AluJ SINE Alu -165 147 40 2146 123 0 0 chr5 32056093 32056401 -167573749 + AluSq SINE Alu 1 308 -5 1093 167 6 0 chr5 32056859 32057033 -167573117 - FAM SINE Alu 0 175 1 4846 169 11 25 chr5 32057163 32058020 -167572130 - L1MB7 LINE L1 0 6184 5317 5455 113 34 1 chr5 32058020 32058206 -167571944 - L1PA16 LINE L1 -4 6162 5984 1483 175 13 50 chr5 32058206 32058509 -167571641 + AluJo SINE Alu 11 302 -10 5455 113 34 1 chr5 32058509 32059327 -167570823 - L1PA16 LINE L1 -182 5984 5144 279 0 0 0 chr5 32059327 32059358 -167570792 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5455 113 34 1 chr5 32059358 32059840 -167570310 - L1PA16 LINE L1 -1022 5144 4679 4846 169 11 25 chr5 32059840 32059921 -167570229 - L1MB7 LINE L1 -867 5317 5259 1765 137 27 7 chr5 32060094 32060386 -167569764 - AluJb SINE Alu -4 308 11 294 148 111 0 chr5 32060509 32060563 -167569587 + MER94 DNA DNA 1 60 -74 2113 120 0 3 chr5 32060564 32060872 -167569278 + AluSq SINE Alu 1 307 -6 7971 15 0 0 chr5 32061330 32062649 -167567501 + L1PA3 LINE L1 4854 6172 0 345 293 85 48 chr5 32063204 32063474 -167566676 - ERVL LTR ERVL -477 5287 5008 1507 169 3 77 chr5 32063544 32063909 -167566241 + AluSx SINE Alu 1 312 0 1873 307 148 29 chr5 32064131 32064409 -167565741 - ERVL LTR ERVL -2540 3224 2981 1527 227 0 0 chr5 32064409 32064713 -167565437 - AluJb SINE Alu -8 304 1 1873 307 148 29 chr5 32064713 32065613 -167564537 - ERVL LTR ERVL -2783 2981 1905 375 304 87 7 chr5 32066668 32066806 -167563344 + MIR SINE MIR 2 150 -112 281 232 116 80 chr5 32067074 32067212 -167562938 + LTR33A LTR ERVL 10 152 -371 495 239 102 18 chr5 32067377 32067544 -167562606 + LTR33A LTR ERVL 343 523 0 441 192 88 110 chr5 32067606 32067668 -167562482 - MER5B DNA MER1_type 0 178 116 1481 165 3 58 chr5 32067668 32067960 -167562190 + AluJo SINE Alu 1 275 -37 297 0 0 0 chr5 32067960 32067993 -167562157 + (CA)n Simple_repeat Simple_repeat 1 33 0 1481 165 3 58 chr5 32067993 32068027 -167562123 + AluJo SINE Alu 275 309 -3 441 192 88 110 chr5 32068027 32068146 -167562004 - MER5B DNA MER1_type -62 116 1 1843 129 36 0 chr5 32068161 32068441 -167561709 - AluJb SINE Alu -22 290 1 2149 113 3 0 chr5 32069561 32069861 -167560289 - AluSx SINE Alu -11 301 1 411 285 166 25 chr5 32070217 32070393 -167559757 - MLT1L LTR MaLR -69 546 396 2724 150 12 5 chr5 32070393 32070814 -167559336 + MER61B LTR ERV1 1 424 -1 411 285 166 25 chr5 32070814 32070963 -167559187 - MLT1L LTR MaLR -219 396 175 885 141 21 115 chr5 32070994 32071064 -167559086 + MER5A DNA MER1_type 17 92 -97 1599 131 96 4 chr5 32071064 32071324 -167558826 + AluSx SINE Alu 11 294 -18 885 141 21 115 chr5 32071324 32071444 -167558706 + MER5A DNA MER1_type 92 189 0 332 283 192 17 chr5 32071561 32071738 -167558412 + L2 LINE L2 3106 3313 0 1174 290 84 46 chr5 32072222 32072767 -167557383 - MLT1K LTR MaLR -19 569 4 2964 144 16 48 chr5 32073773 32074208 -167555942 - MER41E LTR ERV1 0 512 64 2183 104 0 0 chr5 32074208 32074506 -167555644 - AluSg SINE Alu -12 298 1 2964 144 16 48 chr5 32074506 32074545 -167555605 - MER41E LTR ERV1 -448 64 54 2329 94 3 0 chr5 32074545 32074854 -167555296 - AluSg SINE Alu 0 310 1 2964 144 16 48 chr5 32074854 32074893 -167555257 - MER41E LTR ERV1 -458 54 15 1843 85 3 120 chr5 32075545 32075887 -167554263 - AluSg1 SINE Alu -7 302 1 277 273 45 45 chr5 32076203 32076291 -167553859 + MER91B DNA MER1_type 100 187 -3 545 248 126 30 chr5 32077179 32077377 -167552773 - LTR40a LTR ERVL -118 401 185 2126 102 7 0 chr5 32077377 32077682 -167552468 - AluSx SINE Alu -3 309 3 3907 126 24 8 chr5 32077703 32078297 -167551853 - LTR9B LTR ERV1 0 644 42 1843 137 23 13 chr5 32078517 32078824 -167551326 + AluSx SINE Alu 1 310 -2 356 268 44 68 chr5 32079388 32079593 -167550557 + HAL1b LINE L1 709 908 -440 481 219 1 32 chr5 32079709 32079833 -167550317 + HAL1b LINE L1 849 2357 -150 1931 133 7 0 chr5 32079967 32080261 -167549889 - AluSx SINE Alu -16 296 1 1342 184 20 47 chr5 32080263 32080562 -167549588 - AluJo SINE Alu -21 291 1 3085 155 41 24 chr5 32080700 32081241 -167548909 - MER21A LTR ERV1 -6 925 376 313 164 49 33 chr5 32081246 32081307 -167548843 - MER21A LTR ERV1 -667 264 203 2018 107 0 7 chr5 32081318 32081607 -167548543 + AluSx SINE Alu 1 287 -25 232 325 123 0 chr5 32081736 32081890 -167548260 + L2 LINE L2 2453 2625 -689 817 250 18 0 chr5 32082336 32082504 -167547646 + MER45A DNA AcHobo 8 178 0 2108 95 3 20 chr5 32082630 32082936 -167547214 - AluSg SINE Alu -9 301 1 1016 254 60 80 chr5 32083052 32083465 -167546685 + LTR16C LTR ERVL 87 491 0 2092 107 7 13 chr5 32083761 32083933 -167546217 - AluSx SINE Alu -5 307 136 2256 92 0 7 chr5 32083933 32084239 -167545911 - AluSg SINE Alu -6 304 1 2092 107 7 13 chr5 32084239 32084375 -167545775 - AluSx SINE Alu -176 136 1 1126 254 95 44 chr5 32084407 32084817 -167545333 - MLT1J LTR MaLR -13 498 59 827 156 0 0 chr5 32084817 32084939 -167545211 + FLAM_A SINE Alu 1 122 -11 1126 254 95 44 chr5 32084939 32085001 -167545149 - MLT1J LTR MaLR -452 59 2 830 219 17 6 chr5 32085327 32085501 -167544649 + MLT1I LTR MaLR 1 176 -233 1614 172 44 51 chr5 32085501 32085966 -167544184 + MLT2D LTR ERVL 1 444 -20 211 176 0 39 chr5 32085966 32086017 -167544133 + (TCTCTG)n Simple_repeat Simple_repeat 3 51 0 234 217 0 0 chr5 32086027 32086073 -167544077 - Alu SINE Alu -8 294 249 564 15 0 0 chr5 32086084 32086149 -167544001 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 200 167 48 0 chr5 32086150 32086192 -167543958 + (CAGAGA)n Simple_repeat Simple_repeat 1 44 0 2596 127 3 8 chr5 32086194 32086580 -167543570 + MER50 LTR ERV1 328 711 -23 498 129 0 0 chr5 32086581 32086651 -167543499 - AluJ/FLAM SINE Alu -241 71 2 1949 132 10 3 chr5 32087472 32087775 -167542375 + AluSx SINE Alu 7 311 -1 296 260 106 19 chr5 32087775 32087879 -167542271 - MER5A DNA MER1_type -32 157 45 892 106 8 0 chr5 32088906 32089038 -167541112 + AluSq/x SINE Alu 1 133 -179 878 209 0 33 chr5 32089563 32089595 -167540555 - AluJb SINE Alu -1 311 279 231 61 0 0 chr5 32089595 32089628 -167540522 + (TA)n Simple_repeat Simple_repeat 2 34 0 878 209 0 33 chr5 32089628 32089777 -167540373 - AluJb SINE Alu -33 279 136 2010 133 0 7 chr5 32089858 32090159 -167539991 - AluSx SINE Alu -13 299 1 4786 176 22 106 chr5 32091059 32091551 -167538599 + L1MB3 LINE L1 3984 4516 -1667 277 148 229 0 chr5 32091551 32091612 -167538538 + AluJ/FRAM SINE Alu 223 297 -5 2100 111 3 3 chr5 32091617 32091924 -167538226 + AluSp SINE Alu 7 313 0 4786 176 22 106 chr5 32091924 32092322 -167537828 + L1MB3 LINE L1 4520 4950 -1233 2120 132 3 0 chr5 32092322 32092626 -167537524 + AluSx SINE Alu 1 305 -7 4786 176 22 106 chr5 32092626 32092933 -167537217 + L1MB3 LINE L1 4950 5281 -902 2181 126 0 0 chr5 32092933 32093243 -167536907 + AluSq SINE Alu 1 310 -3 4786 176 22 106 chr5 32093243 32093460 -167536690 + L1MB3 LINE L1 5281 5515 -668 1522 99 9 0 chr5 32093460 32093672 -167536478 + AluY SINE Alu 27 240 -71 4786 176 22 106 chr5 32093672 32093702 -167536448 + L1MB3 LINE L1 5515 5546 -637 1904 144 3 28 chr5 32093702 32094022 -167536128 + AluJb SINE Alu 1 312 0 4786 176 22 106 chr5 32094022 32094059 -167536091 + L1MB3 LINE L1 5546 5585 -598 1684 164 27 0 chr5 32094059 32094351 -167535799 + AluSx SINE Alu 1 300 -12 4786 176 22 106 chr5 32094351 32094620 -167535530 + L1MB3 LINE L1 5585 5875 -308 1908 121 6 42 chr5 32094620 32094933 -167535217 + AluSx SINE Alu 1 302 -10 4786 176 22 106 chr5 32094933 32095008 -167535142 + L1MB3 LINE L1 5875 5955 -228 1518 194 3 7 chr5 32095008 32095302 -167534848 - AluJb SINE Alu -19 293 1 4786 176 22 106 chr5 32095302 32095705 -167534445 + L1MB3 LINE L1 5955 6086 -97 1914 178 99 13 chr5 32095707 32096090 -167534060 + MLT2B2 LTR ERVL 1 416 -99 402 108 0 0 chr5 32096090 32096155 -167533995 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 2207 149 166 47 chr5 32096158 32096600 -167533550 - MLT2B3 LTR ERVL 0 554 45 1972 136 3 0 chr5 32096600 32096894 -167533256 - AluSx SINE Alu -15 297 3 2207 149 166 47 chr5 32096894 32096946 -167533204 - MLT2B3 LTR ERVL -509 45 1 311 146 0 0 chr5 32096949 32096997 -167533153 + MLT2B2 LTR ERVL 417 464 0 390 104 104 83 chr5 32096997 32097093 -167533057 + L1MB4 LINE L1 6083 6180 0 2085 89 4 0 chr5 32097441 32097768 -167532382 + AluY SINE Alu 1 328 0 23 0 0 0 chr5 32097768 32097791 -167532359 + AT_rich Low_complexity Low_complexity 1 23 0 1953 148 0 7 chr5 32098200 32098503 -167531647 + AluSx SINE Alu 1 301 -11 2065 120 0 3 chr5 32098555 32098856 -167531294 - AluSx SINE Alu -12 300 1 2218 116 17 59 chr5 32099837 32099923 -167530227 - L1MB3 LINE L1 -1 6182 6094 1587 178 10 7 chr5 32099923 32100232 -167529918 - AluJo SINE Alu -2 310 1 2218 116 17 59 chr5 32100232 32100377 -167529773 - L1MB3 LINE L1 -89 6094 5944 2083 118 3 3 chr5 32100377 32100683 -167529467 - AluSq SINE Alu -7 306 1 2218 116 17 59 chr5 32100683 32100856 -167529294 - L1MB3 LINE L1 -239 5944 5794 1937 123 0 23 chr5 32100867 32101167 -167528983 + AluJo SINE Alu 9 301 -11 2137 101 7 0 chr5 32101565 32101871 -167528279 - AluSx SINE Alu 0 312 5 30 45 0 0 chr5 32101898 32101942 -167528208 + AT_rich Low_complexity Low_complexity 1 44 0 2083 92 0 49 chr5 32102744 32103127 -167527023 - AluSx SINE Alu 0 367 1 270 296 148 0 chr5 32103695 32103837 -167526313 - MIR SINE MIR -9 253 91 1200 194 136 74 chr5 32103837 32104209 -167525941 + MLT1C LTR MaLR 2 441 -64 1932 131 7 14 chr5 32104209 32104500 -167525650 - AluSq SINE Alu -24 289 1 1200 194 136 74 chr5 32104500 32104547 -167525603 + MLT1C LTR MaLR 441 484 -21 230 234 0 0 chr5 32104565 32104612 -167525538 - MIR SINE MIR -168 94 48 266 108 0 0 chr5 32104884 32104921 -167525229 + MIR SINE MIR 94 130 -78 2162 105 0 7 chr5 32105017 32105313 -167524837 + AluSg SINE Alu 1 294 -16 743 133 9 0 chr5 32105313 32105426 -167524724 - L1PB3 LINE L1 -9 6145 6032 23 0 0 0 chr5 32105472 32105495 -167524655 + AT_rich Low_complexity Low_complexity 1 23 0 1974 125 10 6 chr5 32105587 32105898 -167524252 + AluJb SINE Alu 1 312 0 188 111 28 0 chr5 32106623 32106659 -167523491 + (TTA)n Simple_repeat Simple_repeat 2 38 0 245 62 0 0 chr5 32106904 32106936 -167523214 + L1MB7 LINE L1 6008 6039 -145 1912 93 47 47 chr5 32106994 32107294 -167522856 - AluSx SINE Alu -12 300 1 712 118 33 92 chr5 32107295 32107422 -167522728 + L1MB7 LINE L1 6022 6140 -44 1900 113 39 0 chr5 32107422 32107704 -167522446 - AluSc SINE Alu -16 293 1 712 118 33 92 chr5 32107704 32107729 -167522421 + L1MB7 LINE L1 6140 6165 -19 198 261 0 43 chr5 32107735 32107804 -167522346 - L2 LINE L2 0 3313 3248 394 325 65 6 chr5 32107806 32107975 -167522175 - MIR SINE MIR 0 262 84 2823 13 0 0 chr5 32108043 32108360 -167521790 - AluYb8 SINE Alu -1 317 1 402 196 10 49 chr5 32108513 32108615 -167521535 + MLT1J1 LTR MaLR 349 446 0 413 309 18 12 chr5 32108780 32108945 -167521205 - MLT1J LTR MaLR -31 480 315 734 96 0 80 chr5 32109107 32109232 -167520918 - FLAM_C SINE Alu -2 141 27 212 234 62 47 chr5 32109442 32109506 -167520644 - MIR SINE MIR -196 66 2 2200 187 51 26 chr5 32109569 32110062 -167520088 - MLT1D LTR MaLR 0 505 1 1781 116 3 88 chr5 32110388 32110707 -167519443 + AluSx SINE Alu 1 292 -20 293 231 19 48 chr5 32110860 32110964 -167519186 - MER96 DNA MER1_type? -74 101 1 889 158 6 12 chr5 32111199 32111363 -167518787 - AluJo SINE Alu -149 163 1 486 117 48 78 chr5 32111398 32111501 -167518649 + Tigger1 DNA MER2_type 30 129 -2289 1625 194 0 22 chr5 32111502 32111821 -167518329 - AluJb SINE Alu 0 312 1 757 181 0 28 chr5 32111821 32111965 -167518185 - AluJo SINE Alu -171 141 2 7466 107 56 99 chr5 32111965 32112600 -167517550 + Tigger1 DNA MER2_type 965 1626 -792 1552 178 51 4 chr5 32112600 32112876 -167517274 + AluJb SINE Alu 1 289 -23 7466 107 56 99 chr5 32112876 32113550 -167516600 + Tigger1 DNA MER2_type 1626 2328 -90 1859 147 0 0 chr5 32113550 32113836 -167516314 - AluSx SINE Alu -26 286 1 7466 107 56 99 chr5 32113836 32113954 -167516196 + Tigger1 DNA MER2_type 2328 2333 -85 2058 125 0 0 chr5 32113954 32114251 -167515899 - AluSx SINE Alu -15 297 1 2238 113 17 59 chr5 32115231 32115317 -167514833 - L1MB3 LINE L1 -1 6182 6094 1587 178 10 7 chr5 32115317 32115626 -167514524 - AluJo SINE Alu -2 310 1 2238 113 17 59 chr5 32115626 32115771 -167514379 - L1MB3 LINE L1 -89 6094 5944 2027 120 3 3 chr5 32115771 32116070 -167514080 - AluSq SINE Alu -14 299 1 2238 113 17 59 chr5 32116070 32116243 -167513907 - L1MB3 LINE L1 -239 5944 5794 1943 124 0 20 chr5 32116254 32116553 -167513597 + AluJo SINE Alu 9 301 -11 2107 105 7 0 chr5 32116940 32117244 -167512906 - AluSx SINE Alu -2 310 5 2092 102 7 0 chr5 32117302 32117597 -167512553 - AluSq SINE Alu -16 297 1 820 113 14 50 chr5 32117799 32117940 -167512210 - AluJb SINE Alu -175 137 2 2006 118 7 3 chr5 32118496 32118793 -167511357 - AluSx SINE Alu -8 304 7 247 129 188 82 chr5 32118953 32119038 -167511112 + MLT1F1 LTR MaLR 435 528 -39 289 302 245 0 chr5 32119796 32119902 -167510248 - L2 LINE L2 0 3272 3141 1808 119 31 3 chr5 32119983 32120277 -167509873 + AluSq SINE Alu 1 302 -11 200 326 149 0 chr5 32120425 32120600 -167509550 - L2 LINE L2 -337 2977 2777 1956 159 0 0 chr5 32120602 32120911 -167509239 - AluSx SINE Alu -3 309 1 957 204 35 10 chr5 32120936 32121137 -167509013 - AluJo SINE Alu -6 306 101 1717 151 3 57 chr5 32121138 32121455 -167508695 - AluJb SINE Alu -11 301 2 1253 291 132 14 chr5 32121527 32122019 -167508131 - L2 LINE L2 -654 2660 2111 578 264 8 78 chr5 32122467 32122725 -167507425 - L1MC5 LINE L1 -26 7935 7696 706 206 15 0 chr5 32122729 32122860 -167507290 - FLAM_A SINE Alu 0 133 1 1878 121 11 0 chr5 32122956 32123268 -167506882 + AluSx SINE Alu 1 315 0 2073 127 29 19 chr5 32123268 32123636 -167506514 + L1MB1 LINE L1 5792 6167 -1 2338 94 0 0 chr5 32123663 32123972 -167506178 + AluSq SINE Alu 1 309 -4 931 215 51 14 chr5 32124291 32124505 -167505645 + MIR SINE MIR 41 262 0 251 303 41 25 chr5 32125266 32125388 -167504762 + LTR67 LTR ERVL 428 551 -6 560 178 10 0 chr5 32126042 32126143 -167504007 + MLT1A2 LTR MaLR 1 102 -272 691 193 37 15 chr5 32126149 32126284 -167503866 + MLT1A2 LTR MaLR 236 373 -1 541 259 222 32 chr5 32126285 32126632 -167503518 + MLT1L LTR MaLR 30 442 -173 241 262 47 28 chr5 32126660 32126767 -167503383 + MLT1L LTR MaLR 507 615 0 542 252 8 0 chr5 32126891 32127010 -167503140 + MIR SINE MIR 13 132 -130 2283 95 0 3 chr5 32127034 32127319 -167502831 - AluSq SINE Alu -29 284 1 266 216 14 14 chr5 32127343 32127417 -167502733 + MER20B DNA MER1_type 232 305 -478 399 210 25 50 chr5 32127417 32127536 -167502614 + MIR SINE MIR 143 258 -4 1357 71 6 0 chr5 32127659 32127828 -167502322 - AluSp SINE Alu -7 306 137 2085 120 43 0 chr5 32127830 32128129 -167502021 - AluSx SINE Alu 0 312 1 1486 263 34 15 chr5 32128497 32128907 -167501243 + MER20B DNA MER1_type 4 421 -362 871 80 9 0 chr5 32128930 32129042 -167501108 + AluSp SINE Alu 1 113 -200 2120 121 0 24 chr5 32129045 32129343 -167500807 - AluSq SINE Alu -22 291 1 1701 259 57 43 chr5 32129354 32129767 -167500383 - L1ME3A LINE L1 0 6170 5743 1747 154 47 70 chr5 32129767 32129809 -167500341 - THE1C LTR MaLR 0 375 334 2161 113 40 0 chr5 32129809 32130109 -167500041 + AluSx SINE Alu 1 312 0 1747 154 47 70 chr5 32130109 32130450 -167499700 - THE1C LTR MaLR -41 334 1 1701 259 57 43 chr5 32130450 32130689 -167499461 - L1ME3A LINE L1 -427 5743 5509 1159 149 67 37 chr5 32131421 32131747 -167498403 - MSTD LTR MaLR 0 396 16 208 282 115 63 chr5 32131795 32131969 -167498181 - MER5A DNA MER1_type -6 183 1 2380 158 58 27 chr5 32132661 32133002 -167497148 - MSTB LTR MaLR -1 425 96 1822 140 70 20 chr5 32133002 32133359 -167496791 + THE1C LTR MaLR 1 375 0 9683 120 18 65 chr5 32133361 32133685 -167496465 + THE1C-int LTR MaLR 3 341 -1239 1718 152 48 4 chr5 32133685 32133977 -167496173 - AluSx SINE Alu 0 304 1 9683 120 18 65 chr5 32133977 32134033 -167496117 + THE1C-int LTR MaLR 341 398 -1182 2143 138 0 3 chr5 32134033 32134338 -167495812 - AluSq SINE Alu -5 308 5 9683 120 18 65 chr5 32134338 32135612 -167494538 + THE1C-int LTR MaLR 398 1580 0 1911 130 82 25 chr5 32135612 32135967 -167494183 + THE1C LTR MaLR 1 375 0 2380 158 58 27 chr5 32135967 32136033 -167494117 - MSTB LTR MaLR -329 97 1 393 266 81 0 chr5 32136266 32136390 -167493760 + MIR3 SINE MIR 30 163 -45 488 194 153 14 chr5 32136404 32136548 -167493602 + MER104 DNA Tc2 14 177 -3 278 329 98 58 chr5 32136876 32137244 -167492906 - L2 LINE L2 -466 2848 2449 1750 160 9 38 chr5 32137244 32137563 -167492587 + AluJb SINE Alu 3 312 0 278 329 98 58 chr5 32137563 32137748 -167492402 - L2 LINE L2 -865 2449 2273 663 209 264 29 chr5 32137799 32138072 -167492078 + LTR33 LTR ERVL 15 351 -170 229 283 0 0 chr5 32138073 32138126 -167492024 + LTR33 LTR ERVL 468 520 -1 1993 124 3 39 chr5 32138791 32139097 -167491053 + AluSp SINE Alu 1 295 -18 1825 310 64 43 chr5 32139122 32140095 -167490055 + HERVL LTR ERVL 2979 3971 -1683 1636 197 124 50 chr5 32140097 32140239 -167489911 + MLT1D LTR MaLR 31 161 -344 2054 152 3 3 chr5 32140239 32140549 -167489601 - AluJo SINE Alu -2 310 1 1636 197 124 50 chr5 32140549 32140638 -167489512 + MLT1D LTR MaLR 161 242 -263 2050 82 56 4 chr5 32140638 32140946 -167489204 + AluSq SINE Alu 1 322 0 1636 197 124 50 chr5 32140946 32141027 -167489123 + MLT1D LTR MaLR 242 316 -189 2034 117 13 23 chr5 32141027 32141336 -167488814 - AluSx SINE Alu -6 306 1 1636 197 124 50 chr5 32141336 32141462 -167488688 + MLT1D LTR MaLR 316 505 0 364 281 10 10 chr5 32141462 32141558 -167488592 + HERVL LTR ERVL 4023 4118 -1646 430 191 0 0 chr5 32141565 32141633 -167488517 - U4 snRNA snRNA -77 68 1 2242 119 0 3 chr5 32141637 32141947 -167488203 - AluSx SINE Alu -3 309 1 739 118 27 0 chr5 32141967 32142077 -167488073 - AluJo SINE Alu -177 135 23 307 179 0 18 chr5 32142093 32142149 -167488001 + HERVL LTR ERVL 4107 4161 -1603 587 267 20 59 chr5 32142149 32142321 -167487829 - MIR SINE MIR -59 203 39 1037 173 34 29 chr5 32142321 32142529 -167487621 - MER3 DNA MER1_type 0 209 1 587 267 20 59 chr5 32142529 32142558 -167487592 - MIR SINE MIR -223 39 10 2066 134 7 0 chr5 32142987 32143278 -167486872 - AluJb SINE Alu -19 293 1 266 307 11 45 chr5 32143287 32143375 -167486775 - L2 LINE L2 -54 3218 3134 283 217 24 24 chr5 32143715 32143798 -167486352 + MIR SINE MIR 119 201 -61 2238 111 0 0 chr5 32143825 32144123 -167486027 - AluSx SINE Alu -14 298 1 186 344 102 23 chr5 32144151 32144279 -167485871 - L2 LINE L2 -623 2691 2554 1130 148 0 0 chr5 32144317 32144493 -167485657 + L1MB7 LINE L1 5623 5798 -386 1258 132 29 5 chr5 32144494 32144698 -167485452 + L1MB7 LINE L1 5850 6058 -126 766 223 48 31 chr5 32144698 32144927 -167485223 - MIR SINE MIR -27 235 3 338 288 198 37 chr5 32145237 32145712 -167484438 - L2 LINE L2 -1 3271 2729 2117 132 7 0 chr5 32145952 32146256 -167483894 + AluSx SINE Alu 1 306 -6 258 280 133 35 chr5 32146293 32146304 -167483846 - MIR SINE MIR -35 227 218 1950 151 3 13 chr5 32146304 32146602 -167483548 + AluJb SINE Alu 1 295 -17 258 280 133 35 chr5 32146602 32146733 -167483417 - MIR SINE MIR -44 218 71 2072 90 36 7 chr5 32147489 32147790 -167482360 - AluSg SINE Alu 0 310 1 595 254 211 25 chr5 32148100 32148455 -167481695 + L2 LINE L2 2854 3274 -39 22 35 0 0 chr5 32148861 32148890 -167481260 + GC_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 32148937 32148979 -167481171 + GC_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr5 32149331 32149360 -167480790 + GC_rich Low_complexity Low_complexity 1 29 0 183 42 0 0 chr5 32149538 32149562 -167480588 + (CGG)n Simple_repeat Simple_repeat 2 25 0 247 151 41 0 chr5 32149686 32149759 -167480391 + (CCCGG)n Simple_repeat Simple_repeat 2 77 0 704 120 77 8 chr5 32150759 32150876 -167479274 - FLAM_C SINE Alu -8 125 1 490 153 194 14 chr5 32151011 32151155 -167478995 - MER104 DNA Tc2 -5 175 6 419 95 40 14 chr5 32151367 32151441 -167478709 - L1PB3 LINE L1 -9 6145 6070 25 51 0 0 chr5 32151743 32151782 -167478368 + AT_rich Low_complexity Low_complexity 1 39 0 847 170 157 0 chr5 32152276 32152435 -167477715 - MER8 DNA MER2_type -55 184 1 2085 116 3 10 chr5 32152524 32152827 -167477323 + AluSx SINE Alu 1 301 -11 2365 95 3 0 chr5 32153130 32153435 -167476715 - AluSx SINE Alu -6 306 1 1035 160 12 0 chr5 32153973 32154142 -167476008 - FRAM SINE Alu -5 171 1 238 298 107 25 chr5 32154787 32154908 -167475242 + MIR SINE MIR 5 135 -127 2350 70 13 3 chr5 32155239 32155541 -167474609 + AluSp SINE Alu 1 305 -8 288 284 153 24 chr5 32155648 32156028 -167474122 + L1M4 LINE L1 4416 4844 -1302 194 284 0 108 chr5 32156482 32156556 -167473594 - L2 LINE L2 -89 3183 3118 244 235 29 15 chr5 32156738 32156806 -167473344 + MIR SINE MIR 29 97 -165 303 262 12 60 chr5 32156915 32156999 -167473151 - L1ME3A LINE L1 -66 6104 6025 548 221 15 23 chr5 32157058 32157189 -167472961 + FLAM_C SINE Alu 9 138 -5 234 262 16 0 chr5 32157196 32157257 -167472893 + MIR SINE MIR 201 262 0 206 245 0 20 chr5 32157294 32157343 -167472807 + L2 LINE L2 3217 3264 -8 2591 51 0 10 chr5 32157375 32157687 -167472463 + AluY SINE Alu 1 309 -2 307 242 121 20 chr5 32158473 32158572 -167471578 + MER46C DNA MER2_type 87 195 -143 1429 186 47 24 chr5 32158617 32158913 -167471237 + AluJb SINE Alu 1 303 -9 5021 170 82 44 chr5 32158944 32159744 -167470406 + Looper DNA T2_type 6 775 -783 1515 168 45 11 chr5 32159744 32160030 -167470120 - AluJb SINE Alu -14 298 3 5021 170 82 44 chr5 32160030 32160659 -167469491 + Looper DNA T2_type 775 1548 -10 1552 184 44 17 chr5 32160799 32161092 -167469058 + AluJb SINE Alu 1 301 -11 23 0 0 0 chr5 32161128 32161151 -167468999 + AT_rich Low_complexity Low_complexity 1 23 0 615 135 0 0 chr5 32161201 32161290 -167468860 + AluJo SINE Alu 1 89 -223 944 178 45 5 chr5 32161291 32161493 -167468657 + L1M3 LINE L1 5266 5475 -693 360 216 196 0 chr5 32161499 32161596 -167468554 - Looper DNA T2_type -164 1394 1279 248 258 65 0 chr5 32161578 32161640 -167468510 - AluJb SINE Alu -34 268 203 * 1086 178 41 5 chr5 32161640 32161837 -167468313 + AluJo SINE Alu 95 298 -14 586 210 96 38 chr5 32161839 32161996 -167468154 + AluJo/FRAM SINE Alu 137 302 0 1893 153 7 3 chr5 32162750 32163037 -167467113 - AluJb SINE Alu -24 288 1 598 283 95 24 chr5 32163112 32163725 -167466425 - L1MEd LINE L1 -4865 1254 706 1232 181 63 98 chr5 32163730 32164045 -167466105 - AluJo SINE Alu -8 304 1 548 130 190 0 chr5 32164166 32164266 -167465884 + MER46A DNA MER2_type 118 236 0 384 80 0 30 chr5 32164387 32164451 -167465699 - AluSq/x SINE Alu -156 147 97 2629 48 0 3 chr5 32164546 32164856 -167465294 + AluY SINE Alu 1 309 -2 200 310 14 14 chr5 32165130 32165201 -167464949 + MER5C DNA MER1_type 4 74 -250 797 207 6 30 chr5 32165245 32165409 -167464741 - AluJo/FRAM SINE Alu -19 293 134 2092 84 8 0 chr5 32165409 32165670 -167464480 - AluSx SINE Alu -16 296 34 4739 194 78 44 chr5 32165697 32166440 -167463710 - L1 LINE L1 -978 5168 4452 1127 163 202 31 chr5 32166440 32166698 -167463452 - AluJb SINE Alu 0 302 1 4739 194 78 44 chr5 32166698 32166916 -167463234 - L1 LINE L1 -1694 4452 4243 1882 152 0 13 chr5 32166916 32167218 -167462932 - AluSx SINE Alu -14 298 1 4739 194 78 44 chr5 32167218 32167552 -167462598 - L1 LINE L1 -1903 4243 3828 282 235 0 29 chr5 32167610 32167678 -167462472 + MIR SINE MIR 15 80 -182 952 193 293 7 chr5 32167904 32168011 -167462139 - Charlie1 DNA MER1_type -4 2757 2682 2196 101 10 3 chr5 32168011 32168308 -167461842 + AluSx SINE Alu 1 299 -13 952 193 293 7 chr5 32168308 32168592 -167461558 - Charlie1 DNA MER1_type -79 2682 1 276 279 34 62 chr5 32168610 32168789 -167461361 - HAL1 LINE L1 -109 2398 2225 2199 90 40 7 chr5 32169271 32169571 -167460579 - AluY SINE Alu -1 310 1 1117 232 216 31 chr5 32169652 32170199 -167459951 - HAL1 LINE L1 -590 1917 1270 33 0 0 0 chr5 32170462 32170495 -167459655 + AT_rich Low_complexity Low_complexity 1 33 0 1507 162 70 4 chr5 32170495 32170767 -167459383 - AluJo SINE Alu -22 290 1 1930 159 3 10 chr5 32171010 32171318 -167458832 - AluJo SINE Alu -6 306 1 379 211 53 32 chr5 32171471 32171566 -167458584 + MER94 DNA DNA 4 100 -34 480 204 0 0 chr5 32172120 32172208 -167457942 - L3 LINE CR1 -199 1378 1291 1022 149 36 59 chr5 32172996 32173217 -167456933 - MER20 DNA MER1_type 0 219 4 2243 122 0 0 chr5 32174195 32174491 -167455659 + AluSx SINE Alu 1 296 -16 24 53 0 0 chr5 32175449 32175487 -167454663 + AT_rich Low_complexity Low_complexity 1 38 0 2490 72 0 0 chr5 32175548 32175854 -167454296 - AluY SINE Alu -5 306 1 1281 59 0 0 chr5 32176765 32176918 -167453232 + L1PA5 LINE L1 6000 6152 -2 391 297 97 18 chr5 32176972 32177137 -167453013 + MIR3 SINE MIR 23 200 -8 2384 96 3 0 chr5 32177199 32177500 -167452650 - AluSp SINE Alu -11 302 1 186 261 148 0 chr5 32177601 32177689 -167452461 + MIR SINE MIR 42 142 -66 883 167 0 0 chr5 32177736 32177868 -167452282 + FRAM SINE Alu 34 165 -11 279 0 0 0 chr5 32178316 32178347 -167451803 + (CA)n Simple_repeat Simple_repeat 1 31 0 218 319 86 14 chr5 32179613 32179833 -167450317 - L2 LINE L2 -357 2915 2695 25 51 0 0 chr5 32180299 32180338 -167449812 + AT_rich Low_complexity Low_complexity 1 39 0 354 0 89 0 chr5 32180584 32180640 -167449510 + T-rich Low_complexity Low_complexity 1 61 0 2031 100 4 18 chr5 32180649 32180929 -167449221 - AluSx SINE Alu -36 276 1 2260 243 112 70 chr5 32180934 32181880 -167448270 - L1MC4 LINE L1 -15 8027 7019 1283 205 107 25 chr5 32181880 32182126 -167448024 + MER2 DNA MER2_type 1 280 -64 2123 135 0 0 chr5 32182126 32182422 -167447728 - AluSx SINE Alu -13 299 4 1283 205 107 25 chr5 32182422 32182492 -167447658 + MER2 DNA MER2_type 280 343 -1 2260 243 112 70 chr5 32182492 32182742 -167447408 - L1MC4 LINE L1 -1023 7019 6781 352 295 90 30 chr5 32182742 32182976 -167447174 - L1ME LINE L1 -303 5818 5571 1821 141 28 24 chr5 32183214 32183505 -167446645 - AluJb SINE Alu -20 292 1 1240 143 109 13 chr5 32183522 32183752 -167446398 - AluJb SINE Alu -3 309 58 778 129 245 22 chr5 32183838 32183977 -167446173 - AluJb SINE Alu -9 303 134 316 221 15 15 chr5 32184059 32184127 -167446023 - MER2 DNA MER2_type -1 344 277 404 149 15 15 chr5 32184130 32184197 -167445953 + AluS SINE Alu 4 70 -243 216 0 0 0 chr5 32185171 32185195 -167444955 + (T)n Simple_repeat Simple_repeat 1 24 0 23 33 0 0 chr5 32186405 32186435 -167443715 + AT_rich Low_complexity Low_complexity 1 30 0 248 145 0 16 chr5 32186544 32186606 -167443544 + (CAG)n Simple_repeat Simple_repeat 1 61 0 382 238 66 74 chr5 32188561 32188683 -167441467 + MIR3 SINE MIR 43 163 -45 180 100 33 0 chr5 32188737 32188767 -167441383 + MIR3 SINE MIR 168 198 -10 1179 191 5 5 chr5 32188836 32189051 -167441099 + AluJb SINE Alu 75 289 -23 212 257 57 76 chr5 32190229 32190334 -167439816 + MIR SINE MIR 92 194 -68 371 341 130 18 chr5 32190778 32191073 -167439077 + L2 LINE L2 1476 1737 -1577 1631 186 3 40 chr5 32191073 32191396 -167438754 - AluJb SINE Alu -1 311 1 371 341 130 18 chr5 32191396 32191754 -167438396 + L2 LINE L2 1737 2202 -1112 359 323 85 87 chr5 32192111 32192690 -167437460 + L2 LINE L2 2672 3267 -5 1363 158 63 56 chr5 32193026 32193310 -167436840 - AluJb SINE Alu -22 290 5 28 29 0 0 chr5 32193622 32193657 -167436493 + AT_rich Low_complexity Low_complexity 1 35 0 240 304 216 0 chr5 32194459 32194561 -167435589 + MIR SINE MIR 110 233 -29 2164 130 0 3 chr5 32194578 32194886 -167435264 - AluSg SINE Alu -3 307 1 1077 147 12 2 chr5 32194953 32195205 -167434945 + AluSx SINE Alu 2 310 0 2559 56 7 3 chr5 32195724 32196030 -167434120 + AluY SINE Alu 1 307 -4 1993 114 17 27 chr5 32196125 32196422 -167433728 + AluSg SINE Alu 1 294 -16 1291 99 0 68 chr5 32197122 32197343 -167432807 - AluSg/x SINE Alu -18 294 89 958 72 7 29 chr5 32197458 32197596 -167432554 - AluSg SINE Alu -175 135 1 2429 127 36 69 chr5 32197766 32197828 -167432322 - Tigger2a DNA MER2_type -2274 434 371 1614 157 34 0 chr5 32197828 32198095 -167432055 - AluJb SINE Alu -16 296 21 2429 127 36 69 chr5 32198095 32198481 -167431669 - Tigger2a DNA MER2_type -2337 371 1 2041 153 16 62 chr5 32199386 32199583 -167430567 - L1MB8 LINE L1 -87 6091 5886 369 124 0 186 chr5 32199583 32199680 -167430470 - MADE1 DNA Mariner 0 80 2 2041 153 16 62 chr5 32199680 32199914 -167430236 - L1MB8 LINE L1 -292 5886 5680 301 312 84 42 chr5 32199935 32200150 -167430000 - L1ME4a LINE L1 -208 5913 5690 1778 171 60 106 chr5 32200298 32200413 -167429737 - Charlie1b DNA MER1_type -2238 523 404 2288 84 10 3 chr5 32200413 32200709 -167429441 + AluSp SINE Alu 1 298 -15 1778 171 60 106 chr5 32200709 32201050 -167429100 - Charlie1b DNA MER1_type -2357 404 94 2038 147 0 0 chr5 32201050 32201342 -167428808 - AluSx SINE Alu -20 292 1 1778 171 60 106 chr5 32201342 32201432 -167428718 - Charlie1b DNA MER1_type -2667 94 1 328 350 17 8 chr5 32201767 32201884 -167428266 - L2 LINE L2 -22 3291 3174 1406 159 107 15 chr5 32202021 32202291 -167427859 + AluJb SINE Alu 1 295 -17 614 180 0 0 chr5 32202698 32202798 -167427352 - Tigger7 DNA MER2_type 0 2487 2388 * 1176 227 51 8 chr5 32202795 32203051 -167427099 - Tigger7 DNA MER2_type -2220 267 1 364 238 56 88 chr5 32203051 32203271 -167426879 + Charlie8 DNA MER1_type 175 477 -1940 2051 122 0 17 chr5 32203893 32204187 -167425963 - AluSx SINE Alu -23 289 1 297 204 10 3 chr5 32204435 32204517 -167425633 - AluJb SINE Alu -49 253 139 745 203 0 8 chr5 32204574 32204697 -167425453 + FLAM_C SINE Alu 3 124 -19 201 74 0 0 chr5 32205179 32205206 -167424944 + (CATG)n Simple_repeat Simple_repeat 1 27 0 2492 179 61 2 chr5 32206053 32206574 -167423576 + MER57B-int LTR ERV1 3592 4143 -3673 * 15571 132 32 45 chr5 32206572 32206816 -167423334 + MER57B-int LTR ERV1 1853 2099 -5438 2263 103 0 0 chr5 32206816 32207107 -167423043 + AluY SINE Alu 1 291 -20 15571 132 32 45 chr5 32207107 32207216 -167422934 + MER57B-int LTR ERV1 2099 2208 -5329 2220 111 3 0 chr5 32207216 32207505 -167422645 + AluSp SINE Alu 1 290 -23 15571 132 32 45 chr5 32207505 32207940 -167422210 + MER57B-int LTR ERV1 2208 2647 -4890 2557 56 0 3 chr5 32207940 32208243 -167421907 - AluY SINE Alu -9 302 1 15571 132 32 45 chr5 32208243 32209175 -167420975 + MER57B-int LTR ERV1 2647 3590 -3947 5558 106 28 7 chr5 32209175 32209938 -167420212 + MER4E LTR ERV1 1 779 0 15571 132 32 45 chr5 32209938 32211182 -167418968 + MER57B-int LTR ERV1 3590 7146 -391 746 114 23 38 chr5 32211182 32211313 -167418837 + LTR54B LTR ERV1 3 131 -367 1402 108 147 9 chr5 32211316 32211548 -167418602 + MER57B-int LTR ERV1 7274 7537 0 2669 127 13 80 chr5 32211548 32211812 -167418338 + MER57B LTR ERV1 1 222 -212 2488 57 0 3 chr5 32211812 32212111 -167418039 - AluY SINE Alu -13 298 1 2669 127 13 80 chr5 32212111 32212309 -167417841 + MER57B LTR ERV1 222 432 -2 180 0 0 0 chr5 32212342 32212362 -167417788 + (TA)n Simple_repeat Simple_repeat 1 20 0 1463 213 7 0 chr5 32212486 32212763 -167417387 + AluJb SINE Alu 1 279 -33 189 0 0 0 chr5 32212769 32212790 -167417360 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 2234 99 0 0 chr5 32212971 32213287 -167416863 + AluSx SINE Alu 1 316 0 797 176 0 8 chr5 32213544 32213669 -167416481 + FLAM_A SINE Alu 1 124 -9 240 214 0 0 chr5 32215500 32215556 -167414594 + (CA)n Simple_repeat Simple_repeat 1 56 0 289 276 13 0 chr5 32216145 32216221 -167413929 + MIR SINE MIR 69 145 -63 2471 81 3 0 chr5 32216745 32217055 -167413095 + AluSx SINE Alu 1 311 -1 2157 128 0 0 chr5 32217066 32217364 -167412786 + AluSx SINE Alu 1 298 -14 1885 163 0 0 chr5 32217741 32218067 -167412083 - AluJb SINE Alu 0 326 1 2481 78 3 0 chr5 32218076 32218383 -167411767 - AluY SINE Alu -3 308 1 2007 115 4 4 chr5 32218471 32218749 -167411401 + AluSx SINE Alu 35 312 0 733 270 77 31 chr5 32218842 32219064 -167411086 - MIR SINE MIR -27 235 4 255 289 106 35 chr5 32219077 32219122 -167411028 - L1MC/D LINE L1 -2149 5659 5619 1635 149 101 4 chr5 32219122 32219398 -167410752 - AluSx SINE Alu -9 303 1 255 289 106 35 chr5 32219398 32219494 -167410656 - L1MC/D LINE L1 -2189 5619 5508 819 197 0 0 chr5 32220106 32220238 -167409912 + AluJb SINE Alu 2 133 -179 2474 92 0 0 chr5 32220284 32220587 -167409563 - AluSp SINE Alu -5 308 6 232 247 148 37 chr5 32220662 32220743 -167409407 - L2 LINE L2 -1 3271 3182 27 0 0 0 chr5 32221185 32221212 -167408938 + AT_rich Low_complexity Low_complexity 1 27 0 672 106 0 0 chr5 32221258 32221352 -167408798 - AluY SINE Alu 0 311 218 210 226 36 12 chr5 32221961 32222045 -167408105 + (CA)n Simple_repeat Simple_repeat 1 86 0 343 289 58 42 chr5 32225511 32225552 -167404598 - MLT1L LTR MaLR -248 367 328 2783 146 19 5 chr5 32225552 32225970 -167404180 + MER61B LTR ERV1 1 424 -1 343 289 58 42 chr5 32225970 32226118 -167404032 - MLT1L LTR MaLR -287 328 175 443 156 0 0 chr5 32226147 32226211 -167403939 + MER5A DNA MER1_type 17 80 -109 1401 164 0 9 chr5 32226217 32226448 -167403702 + AluSx SINE Alu 11 239 -73 476 150 21 34 chr5 32226476 32226576 -167403574 + MER5A DNA MER1_type 50 151 -32 2032 186 55 4 chr5 32228241 32228693 -167401457 + L1 LINE L1 3991 4465 -1681 277 148 229 0 chr5 32228725 32228786 -167401364 + AluJ/FRAM SINE Alu 223 297 -5 1859 118 14 3 chr5 32228791 32229088 -167401062 + AluSx SINE Alu 7 306 -6 1360 118 99 9 chr5 32229089 32229310 -167400840 + MSTA LTR MaLR 188 428 0 871 162 42 65 chr5 32229311 32229527 -167400623 - MSTB1 LTR MaLR -221 211 1 836 190 86 19 chr5 32229955 32230177 -167399973 + MER21B LTR ERV1 548 857 -74 269 181 69 0 chr5 32230263 32230335 -167399815 + L1MC4 LINE L1 7965 8041 -1 1903 122 24 0 chr5 32230343 32230637 -167399513 + AluSx SINE Alu 1 301 -11 431 125 16 0 chr5 32231093 32231157 -167398993 + MLT2B2 LTR ERVL 348 412 -103 366 115 0 0 chr5 32231160 32231221 -167398929 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 2108 147 163 62 chr5 32231224 32231667 -167398483 - MLT2B3 LTR ERVL 0 554 53 1826 127 18 0 chr5 32231667 32231950 -167398200 - AluSx SINE Alu -15 297 10 2108 147 163 62 chr5 32231950 32232009 -167398141 - MLT2B3 LTR ERVL -501 53 1 294 167 0 0 chr5 32232011 32232059 -167398091 + MLT2C2 LTR ERVL 417 464 0 308 153 92 82 chr5 32232059 32232157 -167397993 + L1MB3 LINE L1 6084 6182 -1 1282 181 13 25 chr5 32232738 32233052 -167397098 + AluJo SINE Alu 1 310 -2 488 94 59 0 chr5 32233052 32233137 -167397013 + L1MB4 LINE L1 6091 6180 0 11547 72 26 6 chr5 32234235 32235833 -167394317 + HERV9 LTR ERV1 3049 4678 -3721 1481 174 40 16 chr5 32236044 32236348 -167393802 - L1MB7 LINE L1 -62 6122 5812 3182 128 81 40 chr5 32236355 32236833 -167393317 - L1MB2 LINE L1 -3 6168 5654 1718 120 35 7 chr5 32236833 32237117 -167393033 - AluSx SINE Alu -20 292 1 3182 128 81 40 chr5 32237117 32237304 -167392846 - L1MB2 LINE L1 -517 5654 5476 285 146 0 0 chr5 32237304 32237352 -167392798 + (TTCCC)n Simple_repeat Simple_repeat 4 51 0 914 196 25 0 chr5 32237394 32237593 -167392557 - AluJb SINE Alu -19 293 90 1442 265 34 17 chr5 32238017 32238428 -167391722 + MER20B DNA MER1_type 4 421 -362 891 71 0 0 chr5 32238451 32238564 -167391586 + AluSp SINE Alu 1 113 -200 1664 131 28 28 chr5 32238567 32238858 -167391292 - AluSq SINE Alu -22 291 1 1277 269 59 44 chr5 32238869 32239282 -167390868 - L1ME3A LINE L1 0 6170 5744 1729 157 53 58 chr5 32239282 32239324 -167390826 - THE1C LTR MaLR 0 375 334 1932 118 42 0 chr5 32239324 32239611 -167390539 + AluSx SINE Alu 1 299 -13 1729 157 53 58 chr5 32239611 32239945 -167390205 - THE1C LTR MaLR -41 334 1 1277 269 59 44 chr5 32239945 32240104 -167390046 - L1ME3A LINE L1 -426 5744 5589 623 86 0 0 chr5 32241954 32242035 -167388115 + MER51B LTR ERV1 1 81 -296 246 304 144 8 chr5 32242045 32242170 -167387980 + MIR SINE MIR 119 260 -2 21 0 0 0 chr5 32242556 32242577 -167387573 + AT_rich Low_complexity Low_complexity 1 21 0 859 48 105 0 chr5 32244297 32244421 -167385729 - MER85 DNA T2_type -2 137 1 303 194 21 54 chr5 32244936 32245029 -167385121 - MER96 DNA MER1_type? -85 90 1 2062 89 45 0 chr5 32245266 32245558 -167384592 - AluSc SINE Alu -3 306 2 698 62 0 10 chr5 32245558 32245655 -167384495 + (TTTC)n Simple_repeat Simple_repeat 2 97 0 1864 138 0 3 chr5 32245656 32245938 -167384212 - AluSx SINE Alu -31 281 1 2192 150 30 57 chr5 32246193 32246414 -167383736 + MSTB1 LTR MaLR 1 206 -226 2794 104 67 2 chr5 32246414 32246816 -167383334 - MSTA LTR MaLR 0 428 1 2192 150 30 57 chr5 32246816 32247034 -167383116 + MSTB1 LTR MaLR 206 428 -4 852 264 14 9 chr5 32247249 32247465 -167382685 - MER20 DNA MER1_type 0 219 3 283 203 49 16 chr5 32247917 32248040 -167382110 + (TA)n Simple_repeat Simple_repeat 1 127 0 439 128 2 4 chr5 32248234 32248310 -167381840 - MSTB2 LTR MaLR -3 454 351 209 186 0 23 chr5 32248628 32248671 -167381479 + C-rich Low_complexity Low_complexity 4 45 0 2014 127 144 8 chr5 32249218 32249264 -167380886 - MLT2D LTR ERVL -2 412 374 774 32 0 0 chr5 32249264 32249357 -167380793 + (TG)n Simple_repeat Simple_repeat 1 93 0 2014 127 144 8 chr5 32249357 32249671 -167380479 - MLT2D LTR ERVL -40 374 3 268 281 0 62 chr5 32250139 32250235 -167379915 + MIR3 SINE MIR 114 203 -5 839 194 7 19 chr5 32250330 32250485 -167379665 - FRAM SINE Alu -12 154 2 390 202 20 20 chr5 32250638 32250737 -167379413 - MLT1L LTR MaLR -4 611 513 1650 128 91 4 chr5 32250737 32251011 -167379139 + L1MC1 LINE L1 5929 6226 -107 381 301 36 31 chr5 32251020 32251216 -167378934 + MER34 LTR ERV1 1 197 -345 664 194 16 0 chr5 32251278 32251407 -167378743 + FRAM SINE Alu 11 141 -35 204 40 0 0 chr5 32251410 32251435 -167378715 + (TG)n Simple_repeat Simple_repeat 2 26 0 1512 127 14 0 chr5 32251591 32251812 -167378338 + LTR62 LTR ERVK 1 224 -495 1288 45 0 0 chr5 32251812 32251969 -167378181 - AluY SINE Alu -7 304 148 2949 141 29 41 chr5 32251971 32251999 -167378151 + LTR62 LTR ERVK 214 241 -478 2183 102 6 29 chr5 32251999 32252313 -167377837 + AluSx SINE Alu 1 307 -5 2264 98 3 0 chr5 32252320 32252625 -167377525 + AluSp SINE Alu 1 306 -7 2949 141 29 41 chr5 32252625 32253098 -167377052 + LTR62 LTR ERVK 247 717 -2 501 293 47 7 chr5 32253100 32253250 -167376900 + MER34 LTR ERV1 352 507 -35 580 141 0 0 chr5 32253295 32253380 -167376770 + L1MC1 LINE L1 6235 6319 -14 512 278 134 57 chr5 32253387 32253740 -167376410 - MLT1L LTR MaLR -74 521 157 327 49 0 0 chr5 32253821 32253862 -167376288 + (CA)n Simple_repeat Simple_repeat 2 42 0 180 111 0 0 chr5 32253897 32253924 -167376226 + (TA)n Simple_repeat Simple_repeat 2 28 0 222 37 0 0 chr5 32253984 32254011 -167376139 + (TG)n Simple_repeat Simple_repeat 2 28 0 1302 243 146 47 chr5 32254076 32254583 -167375567 - MER34B LTR ERV1 -3 562 6 209 127 16 48 chr5 32254603 32254666 -167375484 + T-rich Low_complexity Low_complexity 6 66 0 1829 139 4 0 chr5 32254671 32254952 -167375198 - AluSx SINE Alu 0 312 31 33886 85 4 6 chr5 32254952 32259387 -167370763 + Harlequin LTR ERV1 548 4974 -3425 747 141 138 15 chr5 32259354 32259623 -167370527 + Harlequin LTR ERV1 840 1141 -5755 * 6814 113 5 8 chr5 32259621 32260808 -167369342 + Harlequin LTR ERV1 504 8398 -1 3649 92 317 0 chr5 32260887 32261514 -167368636 + LTR12 LTR ERV1 1 826 0 365 205 43 0 chr5 32261514 32261597 -167368553 - AluJ/FLAM SINE Alu -236 66 2 317 264 106 44 chr5 32261672 32261945 -167368205 - MER95 LTR ERV -132 299 10 549 294 92 14 chr5 32262345 32262563 -167367587 + MIR SINE MIR 19 253 -9 1932 143 0 0 chr5 32262708 32263002 -167367148 + AluJb SINE Alu 1 294 -18 285 146 0 0 chr5 32263044 32263092 -167367058 + (GGGAA)n Simple_repeat Simple_repeat 4 51 0 3600 126 66 28 chr5 32263092 32263282 -167366868 + L1MB2 LINE L1 5476 5657 -514 1820 133 23 13 chr5 32263282 32263583 -167366567 + AluSx SINE Alu 1 304 -8 3600 126 66 28 chr5 32263583 32264060 -167366090 + L1MB2 LINE L1 5657 6168 -3 1621 173 23 16 chr5 32264067 32264374 -167365776 + L1MB7 LINE L1 5812 6120 -64 368 269 0 0 chr5 32264379 32264457 -167365693 - Tigger1 DNA MER2_type -3 2415 2338 1843 127 7 14 chr5 32264457 32264733 -167365417 + AluSq SINE Alu 16 289 -24 783 216 43 75 chr5 32264741 32265105 -167365045 - MLT1C LTR MaLR -50 417 2 270 296 148 0 chr5 32265105 32265247 -167364903 + MIR SINE MIR 91 253 -9 211 238 12 24 chr5 32265789 32265815 -167364335 + (CAAA)n Simple_repeat Simple_repeat 2 27 -57 2044 93 3 46 chr5 32265815 32266139 -167364011 + AluSx SINE Alu 1 310 -2 211 238 12 24 chr5 32266139 32266196 -167363954 + (CAAA)n Simple_repeat Simple_repeat 27 84 0 631 306 57 21 chr5 32267432 32267886 -167362264 + MARNA DNA Mariner 58 569 -17 1837 113 0 85 chr5 32268641 32268959 -167361191 - AluSx SINE Alu -17 295 5 1412 196 71 37 chr5 32269082 32269434 -167360716 - MLT1A1 LTR MaLR -1 364 1 2236 118 113 40 chr5 32270104 32270325 -167359825 - MSTA LTR MaLR -1 427 224 2214 105 0 0 chr5 32270325 32270631 -167359519 - AluSc SINE Alu -3 306 1 2236 118 113 40 chr5 32270631 32270807 -167359343 - MSTA LTR MaLR -204 224 1 1718 122 0 85 chr5 32271387 32271578 -167358572 - AluJb SINE Alu -11 301 148 2349 91 0 0 chr5 32271578 32271887 -167358263 - AluSc SINE Alu 0 309 1 1718 122 0 85 chr5 32271887 32272024 -167358126 - AluJb SINE Alu -164 148 1 2084 79 3 60 chr5 32272688 32273006 -167357144 - AluSq SINE Alu -13 300 1 1999 117 28 0 chr5 32273462 32273753 -167356397 - AluSx SINE Alu -10 302 4 623 86 0 0 chr5 32274190 32274271 -167355879 + MER51B LTR ERV1 1 81 -296 368 323 75 0 chr5 32274281 32274414 -167355736 + MIR SINE MIR 118 260 -2 21 0 0 0 chr5 32274809 32274830 -167355320 + AT_rich Low_complexity Low_complexity 1 21 0 1000 39 78 8 chr5 32276583 32276711 -167353439 - MER85 DNA T2_type -2 137 1 1970 136 10 0 chr5 32277102 32277396 -167352754 - AluSx SINE Alu -15 297 1 21 57 0 0 chr5 32277467 32277502 -167352648 + AT_rich Low_complexity Low_complexity 1 35 0 807 166 0 14 chr5 32278177 32278322 -167351828 + FLAM_C SINE Alu 1 143 0 1541 160 35 28 chr5 32278582 32278864 -167351286 - AluJo SINE Alu -18 294 11 1308 76 6 12 chr5 32280078 32280249 -167349901 - AluSp SINE Alu -10 303 134 2380 68 10 10 chr5 32280249 32280556 -167349594 - AluSq SINE Alu -6 307 1 2218 110 0 0 chr5 32281192 32281491 -167348659 - AluSg1 SINE Alu -10 299 1 1731 144 35 11 chr5 32282513 32282798 -167347352 - AluJb SINE Alu -20 292 1 2365 80 0 3 chr5 32283186 32283485 -167346665 - AluSc SINE Alu -11 298 1 24 32 0 0 chr5 32283960 32283991 -167346159 + AT_rich Low_complexity Low_complexity 1 31 0 1681 112 29 54 chr5 32284103 32284380 -167345770 + MER1B DNA MER1_type 70 339 0 22 0 0 0 chr5 32284677 32284699 -167345451 + AT_rich Low_complexity Low_complexity 1 22 0 2774 205 118 24 chr5 32284703 32285527 -167344623 - L1ME2 LINE L1 -10 6154 5254 1320 234 48 50 chr5 32285817 32286316 -167343834 - L1ME2 LINE L1 -918 5228 4731 2218 144 116 40 chr5 32286650 32287100 -167343050 - L1MB2 LINE L1 -79 6092 5609 1436 134 40 28 chr5 32287146 32287399 -167342751 - Tigger2 DNA MER2_type 0 2718 2463 2416 127 29 59 chr5 32287479 32287570 -167342580 - Tigger2 DNA MER2_type -1964 754 662 780 179 0 50 chr5 32287570 32287710 -167342440 - FLAM_A SINE Alu 0 133 1 2416 127 29 59 chr5 32287710 32288334 -167341816 - Tigger2 DNA MER2_type -2056 662 3 434 263 122 47 chr5 32289488 32289701 -167340449 - MIR SINE MIR -4 258 30 493 133 0 0 chr5 32290100 32290175 -167339975 - AluS SINE Alu -15 294 220 266 135 0 0 chr5 32291450 32291487 -167338663 - MER57A LTR ERV1 -72 331 295 2188 114 10 0 chr5 32293381 32293687 -167336463 + AluSx SINE Alu 1 309 -3 186 318 82 0 chr5 32294023 32294108 -167336042 - L3b LINE CR1 -304 1279 1188 825 249 0 6 chr5 32294119 32294288 -167335862 - FAM SINE Alu -5 170 3 265 203 62 16 chr5 32294348 32294412 -167335738 - L1MC4 LINE L1 -35 8007 7941 * 416 255 166 6 chr5 32294393 32294550 -167335600 - L1MC4 LINE L1 -306 7736 7555 213 235 289 18 chr5 32294550 32294716 -167335434 - L2 LINE L2 -1395 1919 1709 2511 65 3 0 chr5 32294812 32295118 -167335032 - AluY SINE Alu -3 308 2 2195 83 7 3 chr5 32295225 32295513 -167334637 - AluSg1 SINE Alu -9 300 12 2135 125 14 0 chr5 32295893 32296190 -167333960 - AluSx SINE Alu -11 301 1 316 203 40 0 chr5 32296199 32296273 -167333877 - L1MC4 LINE L1 -1 8041 7965 2973 216 88 23 chr5 32296360 32297097 -167333053 - MER21B LTR ERV1 -60 803 19 287 250 87 0 chr5 32297142 32297234 -167332916 - L1MC4 LINE L1 -124 7918 7819 1301 142 132 43 chr5 32297247 32297445 -167332705 - Charlie1 DNA MER1_type -193 2568 2332 1906 130 56 0 chr5 32297445 32297730 -167332420 - AluSq SINE Alu -11 302 2 1301 142 132 43 chr5 32297730 32297834 -167332316 - Charlie1 DNA MER1_type -429 2332 2239 1143 228 32 4 chr5 32297828 32298078 -167332072 - Charlie1 DNA MER1_type -810 1951 1695 * 989 257 130 25 chr5 32298078 32298517 -167331633 - L1MC4 LINE L1 -213 7829 7345 2638 48 0 3 chr5 32298519 32298830 -167331320 - AluY SINE Alu -1 310 1 1910 159 0 10 chr5 32298842 32299156 -167330994 - AluSx SINE Alu -1 311 1 790 269 93 41 chr5 32299249 32299666 -167330484 + ERVL LTR ERVL 4941 5379 -385 255 270 130 40 chr5 32300092 32300292 -167329858 + LTR33 LTR ERVL 302 519 -2 282 197 239 0 chr5 32302000 32302117 -167328033 - MER5C DNA MER1_type -51 273 129 1669 201 3 7 chr5 32302449 32302747 -167327403 - AluJo SINE Alu -15 297 1 24 32 0 0 chr5 32302750 32302781 -167327369 + AT_rich Low_complexity Low_complexity 1 31 0 1692 104 0 0 chr5 32303085 32303306 -167326844 - AluSx SINE Alu -91 221 1 1920 219 86 39 chr5 32303312 32303556 -167326594 - L1MC4a LINE L1 0 7808 7577 2368 97 0 3 chr5 32303556 32303866 -167326284 - AluSg SINE Alu -1 309 1 243 0 0 0 chr5 32303872 32303899 -167326251 + (TG)n Simple_repeat Simple_repeat 2 28 0 1920 219 86 39 chr5 32303899 32304182 -167325968 - L1MC4a LINE L1 -235 7573 7249 632 292 125 32 chr5 32304182 32304583 -167325567 - L2 LINE L2 -2790 524 87 504 242 198 13 chr5 32304590 32304747 -167325403 + MER5A DNA MER1_type 4 189 0 2182 126 0 0 chr5 32304878 32305179 -167324971 - AluSx SINE Alu -11 301 1 368 296 117 11 chr5 32305253 32305432 -167324718 + LTR67 LTR ERVL 353 550 -7 435 254 196 0 chr5 32305861 32305999 -167324151 - L1ME3A LINE L1 -171 5999 5835 299 230 27 0 chr5 32306042 32306116 -167324034 - L1ME3A LINE L1 -304 5866 5791 950 85 46 8 chr5 32306595 32306725 -167323425 + AluJb SINE Alu 1 135 -177 520 240 16 24 chr5 32307654 32307779 -167322371 - L2 LINE L2 -1 3312 3189 429 172 101 10 chr5 32307779 32307878 -167322272 + MER3 DNA MER1_type 1 108 -101 804 144 7 55 chr5 32307986 32308132 -167322018 - L1ME3A LINE L1 -544 5640 5502 1965 163 21 6 chr5 32308608 32308940 -167321210 - L1MC1 LINE L1 -11 6322 5986 347 347 72 16 chr5 32308949 32309142 -167321008 - L3 LINE CR1 -113 1464 1261 225 238 0 95 chr5 32310091 32310175 -167319975 - L3b LINE CR1 -131 1452 1377 476 265 0 26 chr5 32310710 32310827 -167319323 + MIR SINE MIR 46 159 -103 444 250 0 0 chr5 32311929 32312021 -167318129 - Charlie5 DNA MER1_type -2520 92 1 2887 62 10 77 chr5 32312093 32312497 -167317653 + MER51B LTR ERV1 1 377 0 340 230 103 85 chr5 32312528 32312693 -167317457 - MER102b DNA MER1_type -20 321 154 1683 123 20 0 chr5 32313562 32313806 -167316344 + AluSx SINE Alu 64 312 0 243 88 0 0 chr5 32317519 32317553 -167312597 + (TAA)n Simple_repeat Simple_repeat 2 35 0 291 266 9 46 chr5 32318243 32318352 -167311798 + MER103 DNA DNA 24 128 -38 225 222 81 71 chr5 32318466 32318565 -167311585 - MLT1K LTR MaLR -8 580 481 841 185 56 11 chr5 32318595 32318773 -167311377 - MIR SINE MIR -1 261 76 1494 130 88 77 chr5 32318998 32319283 -167310867 + AluSx SINE Alu 1 288 -24 1833 215 52 42 chr5 32320472 32320656 -167309494 - MLT1D LTR MaLR 0 505 324 867 152 0 0 chr5 32320656 32320781 -167309369 - FLAM_C SINE Alu -6 127 3 1833 215 52 42 chr5 32320781 32321094 -167309056 - MLT1D LTR MaLR -181 324 3 258 314 92 16 chr5 32321505 32321690 -167308460 + L1MC/D LINE L1 5703 5901 -1907 2158 85 0 31 chr5 32321846 32322194 -167307956 - AluSx SINE Alu 0 339 1 2226 113 0 3 chr5 32322624 32322925 -167307225 - AluSg SINE Alu -10 300 1 736 124 0 0 chr5 32324128 32324225 -167305925 + AluJ/FLAM SINE Alu 3 99 -213 188 100 25 0 chr5 32324232 32324272 -167305878 + (TA)n Simple_repeat Simple_repeat 1 41 0 2004 104 4 11 chr5 32324278 32324556 -167305594 - AluSx SINE Alu -36 276 1 1293 140 9 28 chr5 32324904 32325118 -167305032 - AluJo SINE Alu -19 293 84 405 175 0 0 chr5 32325193 32325256 -167304894 - AluJ/FLAM SINE Alu -249 63 1 325 228 129 25 chr5 32325274 32325504 -167304646 - L1MC4 LINE L1 -724 7318 6914 452 66 0 0 chr5 32325583 32325644 -167304506 + Alu SINE Alu 241 301 -11 2656 55 0 0 chr5 32325648 32325958 -167304192 - AluY SINE Alu -1 310 1 1444 188 81 95 chr5 32325961 32326061 -167304089 - L1MC4 LINE L1 -1135 6907 6807 1257 181 67 0 chr5 32326061 32326299 -167303851 - L1MD1 LINE L1 0 6242 5989 1444 188 81 95 chr5 32326299 32326355 -167303795 - L1MC4 LINE L1 -1235 6807 6752 1994 124 7 0 chr5 32326355 32326692 -167303458 + AluSx SINE Alu 1 339 0 1444 188 81 95 chr5 32326692 32326963 -167303187 - L1MC4 LINE L1 -1290 6752 6484 2012 152 0 0 chr5 32327361 32327671 -167302479 + AluJo SINE Alu 1 310 -2 1646 188 3 3 chr5 32327674 32327956 -167302194 - AluJb SINE Alu -30 282 1 2305 93 0 0 chr5 32328427 32328728 -167301422 - AluSx SINE Alu -9 303 3 2287 56 3 20 chr5 32329649 32329952 -167300198 - AluY SINE Alu -13 298 1 402 21 0 0 chr5 32330009 32330056 -167300094 + (CA)n Simple_repeat Simple_repeat 2 48 0 269 291 35 0 chr5 32330127 32330213 -167299937 + MIR SINE MIR 124 212 -50 1780 142 31 0 chr5 32330393 32330682 -167299468 + AluJb SINE Alu 1 298 -14 222 274 20 0 chr5 32330824 32330875 -167299275 - MIR3 SINE MIR -16 192 141 344 255 194 44 chr5 32330889 32331049 -167299101 - MER20B DNA MER1_type -30 189 2 273 240 125 10 chr5 32331049 32331153 -167298997 - MIR SINE MIR -57 151 36 23 68 0 0 chr5 32332253 32332297 -167297853 + AT_rich Low_complexity Low_complexity 1 44 0 296 286 0 60 chr5 32332527 32332660 -167297490 - MARNA DNA Mariner -41 545 421 23 54 0 0 chr5 32332739 32332776 -167297374 + AT_rich Low_complexity Low_complexity 1 37 0 2482 68 0 0 chr5 32332914 32333225 -167296925 + AluSx SINE Alu 1 311 -1 23 33 0 0 chr5 32333651 32333681 -167296469 + AT_rich Low_complexity Low_complexity 1 30 0 252 295 86 9 chr5 32333747 32333852 -167296298 - MARNA DNA Mariner -141 445 333 294 185 25 49 chr5 32334217 32334298 -167295852 + LTR67 LTR ERVL 459 537 -20 622 219 0 62 chr5 32334508 32334668 -167295482 + MIR SINE MIR 64 213 -49 1102 313 68 8 chr5 32336297 32336762 -167293388 + HERVL LTR ERVL 2648 3156 -2329 347 261 52 20 chr5 32336821 32336974 -167293176 - L1ME4a LINE L1 0 6121 5964 345 87 0 0 chr5 32337034 32337080 -167293070 - L1MB1 LINE L1 -1 6167 6122 2071 113 3 0 chr5 32337083 32337376 -167292774 - AluSx SINE Alu -18 294 1 1490 175 20 34 chr5 32337892 32338189 -167291961 + AluJb SINE Alu 1 293 -19 2397 51 0 3 chr5 32338555 32338850 -167291300 + AluY SINE Alu 1 294 -17 857 230 38 49 chr5 32338864 32339129 -167291021 + MER74B LTR ERVL 356 617 -5 1689 153 3 33 chr5 32339139 32339446 -167290704 - AluJo SINE Alu -1 311 14 1879 122 42 0 chr5 32340096 32340382 -167289768 + AluSx SINE Alu 2 299 -13 267 226 81 0 chr5 32340627 32340689 -167289461 + MIR3 SINE MIR 101 167 -41 1212 134 0 26 chr5 32340787 32341028 -167289122 - AluSp SINE Alu -11 302 1 1715 137 8 0 chr5 32341107 32341369 -167288781 + AluSx SINE Alu 40 303 -9 617 298 63 38 chr5 32341552 32341790 -167288360 + MIR SINE MIR 19 262 0 22 0 0 0 chr5 32341873 32341895 -167288255 + AT_rich Low_complexity Low_complexity 1 22 0 2840 129 41 0 chr5 32342155 32342621 -167287529 + MER31A LTR ERV1 1 485 0 300 356 108 0 chr5 32343251 32343445 -167286705 - LTR16C LTR ERVL -200 291 77 2638 111 8 3 chr5 32343986 32344348 -167285802 - THE1B LTR MaLR 0 364 1 1837 144 58 55 chr5 32344602 32344672 -167285478 - THE1B LTR MaLR 0 364 296 2183 109 0 3 chr5 32344672 32344974 -167285176 + AluSx SINE Alu 1 301 -11 1837 144 58 55 chr5 32344974 32345264 -167284886 - THE1B LTR MaLR -68 296 3 11398 103 13 5 chr5 32345266 32346833 -167283317 - THE1B-int LTR MaLR 0 1580 1 1980 150 42 33 chr5 32346833 32347194 -167282956 - THE1B LTR MaLR 0 364 1 381 159 3 0 chr5 32347359 32347423 -167282727 - FLAM SINE Alu -6 127 71 2426 193 219 101 chr5 32347423 32347514 -167282636 - LTR28 LTR ERV1 0 1020 941 10603 103 17 0 chr5 32347514 32349871 -167280279 - L1PA8 LINE L1 -1 6171 3771 2426 193 219 101 chr5 32349871 32350691 -167279459 - LTR28 LTR ERV1 -79 941 1 39907 152 44 35 chr5 32350694 32353047 -167277103 - LTR28-int LTR ERV1 -3 7088 4758 2022 114 7 3 chr5 32353047 32353345 -167276805 - AluSx SINE Alu -13 299 1 39907 152 44 35 chr5 32353345 32357059 -167273091 - LTR28-int LTR ERV1 -2333 4758 947 212 0 36 0 chr5 32357059 32357087 -167273063 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 39907 152 44 35 chr5 32357087 32358038 -167272112 - LTR28-int LTR ERV1 -6144 947 6 653 191 7 29 chr5 32358041 32358177 -167271973 - LTR28 LTR ERV1 0 1020 888 401 211 135 10 chr5 32358158 32358262 -167271888 + LTR28 LTR ERV1 903 1019 -1 * 552 97 0 0 chr5 32358263 32358335 -167271815 - AluJ/FLAM SINE Alu -238 74 3 2112 112 103 23 chr5 32358363 32358436 -167271714 + MER51B LTR ERV1 2 68 -309 1873 138 10 3 chr5 32358436 32358733 -167271417 + AluSq SINE Alu 1 299 -14 2112 112 103 23 chr5 32358733 32359007 -167271143 + MER51B LTR ERV1 68 377 0 595 274 85 13 chr5 32359202 32359588 -167270562 - ERVL LTR ERVL -838 4926 4439 1292 293 52 3 chr5 32359646 32360032 -167270118 - ERVL LTR ERVL -1468 4296 3892 632 292 185 21 chr5 32360047 32360372 -167269778 - MLT1J LTR MaLR -5 506 129 336 280 87 65 chr5 32360412 32360627 -167269523 - ERVL LTR ERVL -3192 2572 2348 2755 56 18 0 chr5 32360627 32360965 -167269185 - LTR14A LTR ERVK 0 344 1 336 280 87 65 chr5 32360965 32361024 -167269126 - ERVL LTR ERVL -3416 2348 2292 3708 86 317 2 chr5 32361192 32361820 -167268330 - LTR12 LTR ERV1 0 826 1 7018 101 14 7 chr5 32361979 32363154 -167266996 - HERV9 LTR ERV1 0 8399 504 727 148 108 22 chr5 32363152 32363430 -167266720 - HERV9 LTR ERV1 -5755 1141 840 * 445 61 45 0 chr5 32363423 32363489 -167266661 - HERV9 LTR ERV1 -3445 4954 4886 * 12432 105 10 10 chr5 32363485 32366280 -167263870 - HERV9 LTR ERV1 -1949 489 17 3987 108 209 17 chr5 32366280 32366973 -167263177 - LTR12 LTR ERV1 0 826 1 1127 227 30 44 chr5 32367159 32367454 -167262696 - pTR5 LTR ERV1 -1410 1028 738 403 345 38 51 chr5 32367448 32367801 -167262349 - ERVL LTR ERVL -3396 2089 1743 * 695 269 0 6 chr5 32368003 32368159 -167261991 - MER96 DNA MER1_type? -14 161 7 709 254 203 20 chr5 32368361 32368656 -167261494 + LTR16A LTR ERVL 90 438 -12 2252 298 40 44 chr5 32368672 32369597 -167260553 + HERV16 LTR ERVL 5 925 -4071 562 276 77 15 chr5 32369718 32369914 -167260236 + HERV16 LTR ERVL 2322 2529 -2467 352 353 15 7 chr5 32369986 32370122 -167260028 - ERVL LTR ERVL -1908 3856 3720 1376 178 58 101 chr5 32370356 32370771 -167259379 - MLT2C1 LTR ERVL 0 397 1 1991 129 0 0 chr5 32371332 32371612 -167258538 - AluSx SINE Alu -32 280 1 314 170 170 10 chr5 32371957 32372057 -167258093 - LTR67 LTR ERVL -14 543 428 1475 164 13 0 chr5 32372156 32372388 -167257762 + MSTB1 LTR MaLR 198 432 0 8022 201 54 11 chr5 32372388 32373971 -167256179 + MSTB1-int LTR MaLR 1 1651 0 32 0 0 0 chr5 32374178 32374210 -167255940 + AT_rich Low_complexity Low_complexity 1 32 0 3091 67 5 7 chr5 32374214 32374618 -167255532 - L1PA7 LINE L1 0 6154 5752 1860 165 22 48 chr5 32374618 32374976 -167255174 + MSTB1 LTR MaLR 44 392 -40 1339 191 37 18 chr5 32374983 32375256 -167254894 + AluJo SINE Alu 14 291 -21 377 80 0 0 chr5 32375256 32375306 -167254844 + MSTB1 LTR MaLR 383 432 0 246 371 0 0 chr5 32375409 32375525 -167254625 + (TTAGGG)n Simple_repeat Simple_repeat 1 116 0 229 324 15 0 chr5 32376274 32376342 -167253808 + L2 LINE L2 3204 3272 0 238 224 0 17 chr5 32376493 32376551 -167253599 + LTR33A LTR ERVL 444 500 -23 316 306 22 22 chr5 32378835 32378969 -167251181 - MLT1J LTR MaLR -377 134 1 557 219 115 74 chr5 32379284 32379793 -167250357 + MLT1H LTR MaLR 20 549 0 227 348 11 11 chr5 32380010 32380102 -167250048 + MLT1K LTR MaLR 186 277 -311 307 340 135 23 chr5 32380238 32380453 -167249697 + L1ME LINE L1 5537 5775 -387 1864 135 7 7 chr5 32381462 32381751 -167248399 + AluJb SINE Alu 5 293 -19 196 373 0 0 chr5 32382976 32383043 -167247107 - L2 LINE L2 0 3313 3247 21 0 0 0 chr5 32383148 32383169 -167246981 + AT_rich Low_complexity Low_complexity 1 21 0 16713 143 19 15 chr5 32383175 32383876 -167246274 - L1MA3 LINE L1 0 7724 7027 2363 84 0 13 chr5 32383876 32384187 -167245963 - AluY SINE Alu -4 307 1 16713 143 19 15 chr5 32384187 32387907 -167242243 - L1MA3 LINE L1 -697 7027 3273 1975 108 0 21 chr5 32387907 32388186 -167241964 - L1PA8 LINE L1 0 6172 5900 16713 143 19 15 chr5 32388186 32389028 -167241122 - L1MA3 LINE L1 -4451 3273 2436 6546 55 0 0 chr5 32389015 32389801 -167240349 - L1PA6 LINE L1 0 6154 5369 * 7484 122 3 4 chr5 32389802 32390873 -167239277 - L1MA3 LINE L1 -5101 2464 1395 6713 26 0 4 chr5 32390880 32391652 -167238498 - L1PA3 LINE L1 -3 6152 5384 * 8872 150 9 21 chr5 32391651 32392990 -167237160 - L1MA3 LINE L1 -6151 1414 91 297 0 0 0 chr5 32392990 32393023 -167237127 + (TG)n Simple_repeat Simple_repeat 2 34 0 8872 150 9 21 chr5 32393023 32393100 -167237050 - L1MA3 LINE L1 -7474 91 15 3380 156 76 19 chr5 32393567 32393959 -167236191 + HSMAR2 DNA Mariner 3 444 -858 3027 109 26 12 chr5 32393959 32394381 -167235769 - MSTA LTR MaLR 0 428 1 3380 156 76 19 chr5 32394381 32394603 -167235547 + HSMAR2 DNA Mariner 444 652 -650 2097 155 70 8 chr5 32394600 32394986 -167235164 + MSTA LTR MaLR 19 428 0 * 3854 134 59 11 chr5 32394989 32395603 -167234547 + HSMAR2 DNA Mariner 657 1299 -3 31 44 0 0 chr5 32395901 32395946 -167234204 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 32396037 32396058 -167234092 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr5 32396616 32396636 -167233514 + (A)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr5 32397061 32397090 -167233060 + AT_rich Low_complexity Low_complexity 1 29 0 193 287 115 11 chr5 32397215 32397302 -167232848 + MIR3 SINE MIR 92 187 -21 221 171 0 0 chr5 32398003 32398044 -167232106 + T-rich Low_complexity Low_complexity 1 41 0 357 82 0 0 chr5 32399499 32399548 -167230602 + (TG)n Simple_repeat Simple_repeat 1 49 0 203 133 0 44 chr5 32399801 32399846 -167230304 + (CACCC)n Simple_repeat Simple_repeat 3 45 0 189 107 0 0 chr5 32400168 32400196 -167229954 + (T)n Simple_repeat Simple_repeat 1 28 0 225 159 0 0 chr5 32400458 32400502 -167229648 + (CGG)n Simple_repeat Simple_repeat 1 44 0 400 309 58 5 chr5 32403478 32403666 -167226484 + MIR SINE MIR 59 256 -6 24 53 0 0 chr5 32404215 32404253 -167225897 + AT_rich Low_complexity Low_complexity 1 38 0 597 248 146 36 chr5 32404857 32405131 -167225019 - HAL1 LINE L1 -35 2472 2169 748 129 86 17 chr5 32405132 32405248 -167224902 + FAM SINE Alu 37 160 -25 469 269 48 14 chr5 32405257 32405465 -167224685 - HAL1 LINE L1 -335 2172 1958 12382 65 19 4 chr5 32405470 32407124 -167223026 - L1PA6 LINE L1 -3 6151 4470 189 0 0 0 chr5 32407124 32407145 -167223005 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 12382 65 19 4 chr5 32407145 32407815 -167222335 - L1PA6 LINE L1 -1684 4470 3812 1142 274 71 16 chr5 32407815 32408513 -167221637 - HAL1 LINE L1 -647 1860 1063 22 0 0 0 chr5 32409296 32409318 -167220832 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 32409527 32409570 -167220580 + AT_rich Low_complexity Low_complexity 1 43 0 1435 187 73 11 chr5 32410001 32410274 -167219876 + AluSx SINE Alu 1 290 -22 1251 243 91 32 chr5 32410351 32410725 -167219425 - MSTD LTR MaLR 0 396 1 447 220 10 33 chr5 32412304 32412439 -167217711 - L1MC4 LINE L1 0 8040 7880 438 176 0 0 chr5 32412456 32412541 -167217609 + CT-rich Low_complexity Low_complexity 3 87 0 1890 246 72 56 chr5 32412568 32413264 -167216886 - L1MC4 LINE L1 -115 7927 7221 2634 131 45 0 chr5 32413495 32413899 -167216251 + L1PA16 LINE L1 5743 6164 -2 328 246 58 92 chr5 32414158 32414398 -167215752 - MER112 DNA MER1_type -6 254 23 249 282 0 39 chr5 32414376 32414454 -167215696 - MER112 DNA MER1_type -185 75 1 * 536 236 107 96 chr5 32415345 32415749 -167214401 - L1ME4a LINE L1 -22 6099 5579 1798 166 0 10 chr5 32415749 32416045 -167214105 - AluJb SINE Alu -13 299 7 536 236 107 96 chr5 32416045 32416149 -167214001 - L1ME4a LINE L1 -542 5579 5478 343 302 98 34 chr5 32416156 32416391 -167213759 - L1ME4a LINE L1 -1639 4507 4258 265 274 40 40 chr5 32416391 32416515 -167213635 - L1P LINE L1 -1924 4222 4099 248 154 13 90 chr5 32416553 32416631 -167213519 - L1ME4a LINE L1 -2160 3986 3915 402 310 27 46 chr5 32416649 32416801 -167213349 - L1ME4a LINE L1 -2302 3844 3698 2352 100 0 3 chr5 32416801 32417102 -167213048 + AluSq SINE Alu 1 300 -13 402 310 27 46 chr5 32417102 32417210 -167212940 - L1ME4a LINE L1 -2448 3698 3589 1630 178 24 18 chr5 32417299 32417357 -167212793 - L1MD3 LINE L1 -2 7993 7937 1444 161 64 67 chr5 32417357 32417437 -167212713 - MER46B DNA MER2_type -2496 235 156 207 0 0 0 chr5 32417437 32417460 -167212690 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 357 24 0 0 chr5 32417459 32417501 -167212649 + (TA)n Simple_repeat Simple_repeat 1 42 0 1444 161 64 67 chr5 32417460 32417639 -167212511 - MER46B DNA MER2_type -2575 156 141 2792 19 0 0 chr5 32417639 32417950 -167212200 - AluYa5 SINE Alu 0 311 1 1444 161 64 67 chr5 32417950 32418091 -167212059 - MER46B DNA MER2_type -2590 141 1 1630 178 24 18 chr5 32418091 32418108 -167212042 - L1MD3 LINE L1 -58 7937 7922 2021 164 29 26 chr5 32418108 32418455 -167211695 - MER7A DNA MER2_type 0 346 1 1630 178 24 18 chr5 32418455 32418716 -167211434 - L1MD3 LINE L1 -73 7922 7654 2474 228 48 43 chr5 32418730 32419560 -167210590 + L1M4 LINE L1 3787 4620 -1526 719 204 68 37 chr5 32419580 32419771 -167210379 - L1MC4a LINE L1 -314 7494 7298 293 288 117 55 chr5 32420031 32420194 -167209956 + MIR SINE MIR 86 258 -4 566 281 81 94 chr5 32420413 32420564 -167209586 - MLT1J LTR MaLR -58 453 302 2926 13 0 0 chr5 32420564 32420880 -167209270 + AluYb8 SINE Alu 1 316 -2 566 281 81 94 chr5 32420880 32421187 -167208963 - MLT1J LTR MaLR -209 302 1 2230 105 0 0 chr5 32421411 32421746 -167208404 - AluSq SINE Alu 0 335 1 557 304 43 0 chr5 32422508 32422669 -167207481 + MIR SINE MIR 32 199 -63 246 286 14 14 chr5 32422933 32423003 -167207147 - L2 LINE L2 -3 3310 3241 256 335 92 49 chr5 32423160 32423261 -167206889 + L2 LINE L2 1862 1957 -1357 1062 153 89 11 chr5 32423261 32423451 -167206699 + MER3 DNA MER1_type 3 207 -2 256 335 92 49 chr5 32423451 32423859 -167206291 + L2 LINE L2 1957 2393 -921 336 192 55 89 chr5 32424018 32424164 -167205986 - L1ME4a LINE L1 -1 6120 5980 2435 100 0 0 chr5 32424550 32424860 -167205290 + AluSx SINE Alu 1 310 -2 226 146 21 21 chr5 32425509 32425557 -167204593 + MIR SINE MIR 215 262 0 463 284 35 14 chr5 32426379 32426520 -167203630 + MIR SINE MIR 81 224 -38 26 0 0 0 chr5 32426520 32426546 -167203604 + AT_rich Low_complexity Low_complexity 1 26 0 1998 58 17 0 chr5 32426739 32426979 -167203171 - L1PA7 LINE L1 0 6154 5911 1033 167 0 0 chr5 32428488 32428650 -167201500 - AluJb SINE Alu -19 293 132 229 337 43 11 chr5 32428778 32428870 -167201280 + MIR SINE MIR 21 115 -147 1286 146 82 63 chr5 32429119 32429434 -167200716 - MER33 DNA MER1_type 0 324 4 1945 151 3 3 chr5 32429738 32430029 -167200121 + AluJb SINE Alu 1 291 -21 23 33 0 0 chr5 32430253 32430283 -167199867 + AT_rich Low_complexity Low_complexity 1 30 0 665 186 65 0 chr5 32430367 32430491 -167199659 - FLAM_A SINE Alu -1 132 1 779 211 0 0 chr5 32430942 32431065 -167199085 + FLAM_A SINE Alu 1 123 -10 41 82 0 0 chr5 32431078 32431175 -167198975 + AT_rich Low_complexity Low_complexity 1 97 0 304 332 25 40 chr5 32431180 32431379 -167198771 - L1 LINE L1 -2000 4146 3951 1149 178 39 27 chr5 32431792 32432050 -167198100 - L1MD2 LINE L1 -3 6356 6096 337 185 67 74 chr5 32432052 32432187 -167197963 - L1 LINE L1 -2210 3936 3803 2405 99 0 0 chr5 32432591 32432895 -167197255 - AluSc SINE Alu -5 304 1 219 323 121 36 chr5 32432936 32433159 -167196991 + MIR SINE MIR 2 243 -19 444 282 77 89 chr5 32433301 32433549 -167196601 + L2 LINE L2 2993 3237 -35 198 118 0 0 chr5 32433566 32433600 -167196550 + (TTA)n Simple_repeat Simple_repeat 2 35 0 233 314 0 0 chr5 32433612 32433682 -167196468 - MIR3 SINE MIR -47 161 92 840 251 35 92 chr5 32435660 32436179 -167193971 - HAL1 LINE L1 -46 2461 1973 702 263 86 8 chr5 32436346 32436362 -167193788 - HAL1 LINE L1 -821 1686 1673 1823 169 7 0 chr5 32436362 32436657 -167193493 - AluJb SINE Alu -14 298 2 702 263 86 8 chr5 32436657 32436883 -167193267 - HAL1 LINE L1 -834 1673 1425 715 250 51 76 chr5 32436890 32437357 -167192793 - LTR33A LTR ERVL 0 523 1 878 211 87 26 chr5 32437428 32437694 -167192456 - HAL1 LINE L1 -1247 1260 979 507 254 17 28 chr5 32437701 32437878 -167192272 + MER104 DNA Tc2 6 180 0 1444 254 74 105 chr5 32437914 32438759 -167191391 - HAL1 LINE L1 -1539 968 155 1873 111 0 25 chr5 32438759 32439039 -167191111 - AluSx SINE Alu -39 273 1 1444 254 74 105 chr5 32439039 32439144 -167191006 - HAL1 LINE L1 -2352 155 48 2268 110 0 16 chr5 32440523 32440841 -167189309 + AluSq SINE Alu 1 313 0 198 0 0 0 chr5 32442210 32442232 -167187918 + (T)n Simple_repeat Simple_repeat 1 22 0 2436 67 0 0 chr5 32443444 32443741 -167186409 - AluY SINE Alu -14 297 1 241 298 43 11 chr5 32444290 32444384 -167185766 + L2 LINE L2 1992 2088 -1226 30008 45 2 1 chr5 32444387 32448635 -167181515 - L1PA5 LINE L1 -202 5952 1700 2919 219 64 32 chr5 32448613 32450362 -167179788 - L1ME2 LINE L1 -331 5767 636 * 7286 59 3 52 chr5 32450375 32451868 -167178282 - L1PA7 LINE L1 -2 6152 4698 1413 169 48 54 chr5 32451881 32452195 -167177955 - AluSx SINE Alu 0 312 1 512 278 46 45 chr5 32452198 32452494 -167177656 - L1ME2 LINE L1 -4932 769 498 682 287 69 75 chr5 32452637 32453087 -167177063 - L1ME2 LINE L1 -5539 531 83 2427 100 0 0 chr5 32453087 32453398 -167176752 + AluSq SINE Alu 1 311 -2 682 287 69 75 chr5 32453398 32453470 -167176680 - L1ME2 LINE L1 -5987 83 12 705 230 54 29 chr5 32454342 32454546 -167175604 - LTR33 LTR ERVL 0 521 313 401 213 90 25 chr5 32454657 32454779 -167175371 - LTR33 LTR ERVL -389 132 3 186 43 0 0 chr5 32455205 32455228 -167174922 + (TTA)n Simple_repeat Simple_repeat 2 24 0 272 257 92 18 chr5 32455942 32456051 -167174099 + MIR SINE MIR 144 260 -2 304 266 0 0 chr5 32456059 32456123 -167174027 - MER103 DNA DNA -95 71 8 2028 155 7 0 chr5 32458731 32459034 -167171116 + AluJb SINE Alu 1 305 -7 223 281 18 96 chr5 32459283 32459450 -167170700 + L3b LINE CR1 1276 1429 -154 607 286 108 9 chr5 32460787 32461000 -167169150 - MIR SINE MIR 0 262 29 496 281 29 7 chr5 32461314 32461453 -167168697 - MIR SINE MIR -19 243 102 403 316 60 24 chr5 32462370 32462538 -167167612 - MIR SINE MIR -13 249 76 316 182 15 15 chr5 32463550 32463616 -167166534 + MIR SINE MIR 158 223 -39 1957 112 0 8 chr5 32463877 32464145 -167166005 - AluSq SINE Alu -15 298 33 1947 121 0 4 chr5 32464176 32464441 -167165709 - AluSx SINE Alu -10 302 39 684 278 53 60 chr5 32464694 32465161 -167164989 - L1ME4a LINE L1 -166 5955 5492 1333 229 100 35 chr5 32465236 32465846 -167164304 - L2 LINE L2 0 3313 2662 315 232 184 24 chr5 32465898 32466023 -167164127 + MIR3 SINE MIR 47 191 -17 201 284 0 15 chr5 32468353 32468420 -167161730 + (TAA)n Simple_repeat Simple_repeat 2 67 0 629 256 23 17 chr5 32468442 32468618 -167161532 - MIR SINE MIR -50 212 36 233 163 0 0 chr5 32469842 32469885 -167160265 + MIR SINE MIR 111 153 -109 482 66 11 154 chr5 32470124 32470215 -167159935 + MADE1 DNA Mariner 3 80 0 462 245 68 62 chr5 32472305 32472497 -167157653 + MIR SINE MIR 18 210 -52 1753 143 8 0 chr5 32472775 32473033 -167157117 - AluSx SINE Alu -14 298 39 2131 122 10 16 chr5 32473721 32474033 -167156117 - AluSx SINE Alu -2 310 1 2250 109 3 0 chr5 32481312 32481606 -167148544 - AluSx SINE Alu -17 295 1 274 242 220 0 chr5 32481878 32481969 -167148181 + MIR SINE MIR 126 236 -26 250 329 14 36 chr5 32483165 32483305 -167146845 - MIR SINE MIR -7 255 119 31727 114 21 75 chr5 32483309 32488182 -167141968 + L1PA8A LINE L1 9 4430 -1701 360 0 0 0 chr5 32488182 32488222 -167141928 + (CA)n Simple_repeat Simple_repeat 1 40 0 31727 114 21 75 chr5 32488222 32489832 -167140318 + L1PA8A LINE L1 4430 6126 -5 334 191 15 15 chr5 32489861 32489929 -167140221 - MER116 DNA Mariner -12 68 1 2368 118 3 3 chr5 32490286 32490618 -167139532 - THE1B LTR MaLR -32 332 1 506 195 0 0 chr5 32490898 32490985 -167139165 - MIR SINE MIR -130 132 46 184 346 82 33 chr5 32491087 32491246 -167138904 + L2 LINE L2 2555 2732 -582 3225 161 78 19 chr5 32491246 32491824 -167138326 + LTR9 LTR ERV1 1 612 0 184 346 82 33 chr5 32491824 32491907 -167138243 + L2 LINE L2 2732 2809 -505 330 301 35 0 chr5 32492667 32492780 -167137370 + MIR SINE MIR 57 173 -89 640 149 0 0 chr5 32492978 32493072 -167137078 - LTR12 LTR ERV1 -133 581 488 345 221 71 71 chr5 32493072 32493199 -167136951 - LTR30 LTR ERV1 -67 655 553 791 117 0 209 chr5 32493286 32493516 -167136634 - LTR12 LTR ERV1 -480 234 53 265 231 0 0 chr5 32493516 32493568 -167136582 - LTR30 LTR ERV1 -670 52 1 536 222 142 12 chr5 32493693 32493855 -167136295 - MIR SINE MIR -70 192 10 1669 156 10 50 chr5 32494163 32494464 -167135686 - AluJb SINE Alu -23 289 1 1910 196 20 58 chr5 32495479 32495655 -167134495 - MER63B DNA MER1_type -631 431 250 6745 92 21 21 chr5 32495655 32496842 -167133308 - L1PA13 LINE L1 0 6163 4977 1910 196 20 58 chr5 32496842 32497113 -167133037 - MER63B DNA MER1_type -812 250 1 2159 111 7 7 chr5 32498080 32498378 -167131772 - AluSx SINE Alu -14 298 1 2458 87 0 0 chr5 32498711 32499010 -167131140 + AluSc SINE Alu 1 299 -10 823 255 17 62 chr5 32500600 32500890 -167129260 - L1MEd LINE L1 -5837 282 6 4390 158 8 12 chr5 32501799 32502520 -167127630 - L1MB2 LINE L1 -8 6163 5446 2732 84 14 0 chr5 32503535 32503880 -167126270 + THE1A LTR MaLR 3 352 -3 8858 88 9 2 chr5 32503883 32505050 -167125100 + THE1A-int LTR MaLR 1 1175 -405 180 0 0 0 chr5 32505354 32505374 -167124776 + (A)n Simple_repeat Simple_repeat 1 20 0 236 363 70 6 chr5 32505377 32505534 -167124616 - L2 LINE L2 -508 2806 2640 436 325 0 12 chr5 32505539 32505699 -167124451 - L2 LINE L2 -912 2402 2245 210 37 0 0 chr5 32505714 32505741 -167124409 + (GA)n Simple_repeat Simple_repeat 1 27 0 202 274 16 32 chr5 32505917 32505979 -167124171 + L3 LINE CR1 1515 1575 -2 1949 123 29 16 chr5 32506339 32506647 -167123503 - AluSx SINE Alu 0 312 1 1725 160 77 3 chr5 32506931 32507243 -167122907 + MER47A DNA MER2_type 1 335 -31 27 29 0 0 chr5 32507700 32507734 -167122416 + AT_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr5 32508490 32508520 -167121630 + AT_rich Low_complexity Low_complexity 1 30 0 384 294 0 0 chr5 32508815 32508924 -167121226 - MIR3 SINE MIR -12 196 88 2075 261 63 15 chr5 32509027 32509568 -167120582 - MLT1E LTR MaLR 0 593 27 394 311 60 38 chr5 32509646 32509829 -167120321 + L3 LINE CR1 569 755 -822 2126 203 73 13 chr5 32510602 32511080 -167119070 + MER92B LTR ERV1 5 511 -125 210 136 0 0 chr5 32511080 32511124 -167119026 + (T)n Simple_repeat Simple_repeat 1 44 0 11663 16 0 0 chr5 32511124 32513219 -167116931 - L1HS LINE L1 0 6155 4061 * 27608 36 38 2 chr5 32513211 32516589 -167113561 + L1HS LINE L1 576 4074 -2072 521 192 8 7 chr5 32516589 32516742 -167113408 + MER92B LTR ERV1 506 636 0 288 53 0 0 chr5 32517084 32517122 -167113028 + (TG)n Simple_repeat Simple_repeat 2 39 0 415 244 76 0 chr5 32517241 32517360 -167112790 + L3 LINE CR1 771 898 -679 371 200 0 24 chr5 32517389 32517474 -167112676 - MLT1K LTR MaLR 0 588 506 285 263 43 120 chr5 32518068 32518277 -167111873 + L3 LINE CR1 1062 1254 -323 1237 106 28 0 chr5 32518346 32518525 -167111625 - THE1C LTR MaLR -191 184 1 526 226 65 96 chr5 32519210 32519471 -167110679 - MER112 DNA MER1_type -7 253 1 183 80 0 0 chr5 32520327 32520352 -167109798 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 256 229 24 48 chr5 32521472 32521555 -167108595 + GA-rich Low_complexity Low_complexity 4 84 0 187 256 0 0 chr5 32521924 32521967 -167108183 + L2 LINE L2 3267 3309 -4 761 203 184 0 chr5 32523880 32524038 -167106112 + MER5A DNA MER1_type 1 187 -2 2479 51 3 10 chr5 32524210 32524521 -167105629 - AluY SINE Alu -1 310 2 240 243 0 0 chr5 32524566 32524640 -167105510 + CT-rich Low_complexity Low_complexity 4 77 0 611 258 74 93 chr5 32524657 32525075 -167105075 + MLT1K LTR MaLR 71 480 -108 399 269 131 3 chr5 32526437 32526594 -167103556 - MIR SINE MIR -56 206 34 225 295 137 0 chr5 32527585 32527680 -167102470 - MIR SINE MIR -49 213 106 982 131 91 11 chr5 32527948 32528123 -167102027 - MER53 DNA DNA 0 189 1 508 239 191 21 chr5 32528231 32528419 -167101731 + MIR SINE MIR 33 252 -10 222 239 0 15 chr5 32528485 32528552 -167101598 + (TA)n Simple_repeat Simple_repeat 2 67 0 180 219 0 0 chr5 32529159 32529200 -167100950 + CT-rich Low_complexity Low_complexity 5 45 0 776 160 0 16 chr5 32529332 32529457 -167100693 + FLAM_A SINE Alu 1 123 -10 2235 99 3 3 chr5 32529467 32529759 -167100391 + AluSq SINE Alu 1 292 -21 2238 79 14 0 chr5 32529824 32530115 -167100035 - AluY SINE Alu -16 295 1 826 272 105 8 chr5 32530493 32530732 -167099418 + MER45C DNA AcHobo 1 262 -691 554 271 93 73 chr5 32530808 32530931 -167099219 + MER45C DNA AcHobo 693 812 -769 1845 151 10 3 chr5 32530931 32531223 -167098927 + AluJo SINE Alu 1 294 -18 554 271 93 73 chr5 32531223 32531346 -167098804 + MER45C DNA AcHobo 812 944 -9 324 270 88 57 chr5 32534697 32534856 -167095294 + L2 LINE L2 2924 3087 -185 1216 305 35 13 chr5 32534950 32535347 -167094803 + LTR16A LTR ERVL 29 434 -16 344 270 36 80 chr5 32535358 32535495 -167094655 + L2 LINE L2 3140 3270 -2 519 213 43 130 chr5 32535681 32535911 -167094239 - LTR33 LTR ERVL -11 510 301 641 155 8 0 chr5 32536981 32537110 -167093040 + CT-rich Low_complexity Low_complexity 3 132 0 650 286 94 28 chr5 32537124 32537379 -167092771 - L2 LINE L2 0 3313 3042 772 269 115 45 chr5 32537616 32538396 -167091754 + L2 LINE L2 2458 3301 -12 211 194 0 0 chr5 32538433 32538469 -167091681 + (CA)n Simple_repeat Simple_repeat 2 37 0 1468 192 2 86 chr5 32538547 32538943 -167091207 + MLT1A2 LTR MaLR 1 363 -11 310 167 36 12 chr5 32539577 32539661 -167090489 - L1MA4A LINE L1 -27 6276 6191 279 333 78 13 chr5 32539699 32539852 -167090298 + MIR SINE MIR 78 240 -22 377 242 223 40 chr5 32541450 32541691 -167088459 + Charlie8 DNA MER1_type 1 275 -2142 471 170 94 9 chr5 32541860 32541966 -167088184 + MIR SINE MIR 124 238 -24 223 289 52 41 chr5 32542116 32542213 -167087937 - L2 LINE L2 -1 3271 3174 397 225 38 0 chr5 32542411 32542491 -167087659 + MER63 DNA MER1_type 44 752 -84 284 256 78 0 chr5 32542604 32542709 -167087441 - MIR SINE MIR -58 150 38 1416 259 84 30 chr5 32542767 32543337 -167086813 + HAL1 LINE L1 1658 2267 -240 243 0 0 0 chr5 32543337 32543364 -167086786 + (TG)n Simple_repeat Simple_repeat 1 27 0 1416 259 84 30 chr5 32543364 32543426 -167086724 + HAL1 LINE L1 2267 2324 -183 246 219 27 0 chr5 32543496 32543569 -167086581 + L1MC/D LINE L1 5211 5285 -861 * 798 198 0 21 chr5 32543556 32543748 -167086402 + L1 LINE L1 4507 4694 -1452 324 293 90 0 chr5 32543862 32544066 -167086084 + L1MC/D LINE L1 5263 5481 -689 1789 167 16 29 chr5 32544091 32544469 -167085681 - L1MB2 LINE L1 -14 6157 5785 562 102 18 73 chr5 32544473 32544823 -167085327 + (TATAA)n Simple_repeat Simple_repeat 1 330 0 3817 110 5 90 chr5 32547331 32548251 -167081899 - L1P LINE L1 -3242 2904 2063 4767 224 50 16 chr5 32548496 32549849 -167080301 - L1 LINE L1 -1895 4251 2853 266 176 40 0 chr5 32550097 32550171 -167079979 + L1P LINE L1 4618 4694 -1452 391 297 61 38 chr5 32550279 32550491 -167079659 + L1MC/D LINE L1 5265 5481 -2327 1789 167 16 29 chr5 32550516 32550894 -167079256 - L1MB2 LINE L1 -14 6157 5785 457 152 47 0 chr5 32550930 32551101 -167079049 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 464 152 42 0 chr5 32551114 32551279 -167078871 + (TTATA)n Simple_repeat Simple_repeat 5 176 0 419 236 17 22 chr5 32551326 32551504 -167078646 + (CATATA)n Simple_repeat Simple_repeat 2 178 0 5931 199 19 14 chr5 32551506 32553344 -167076806 - L1MB2 LINE L1 -378 5793 3952 337 328 37 21 chr5 32553394 32553583 -167076567 + L1MC/D LINE L1 5560 5751 -2057 11802 197 39 9 chr5 32553616 32555319 -167074831 - L1PA16 LINE L1 -9 6157 4508 240 35 0 0 chr5 32555319 32555348 -167074802 + (TG)n Simple_repeat Simple_repeat 2 30 0 11802 197 39 9 chr5 32555348 32557400 -167072750 - L1PA16 LINE L1 -1658 4508 2291 442 265 141 18 chr5 32557597 32557767 -167072383 - MIR SINE MIR -70 192 2 2206 114 7 0 chr5 32557876 32558175 -167071975 + AluSx SINE Alu 1 301 -11 776 194 92 20 chr5 32558380 32558576 -167071574 - MER6B DNA MER2_type 0 210 1 221 178 0 22 chr5 32559403 32559448 -167070702 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 362 247 12 0 chr5 32559478 32559559 -167070591 - L2 LINE L2 -37 3235 3154 442 248 26 9 chr5 32561126 32561239 -167068911 + MIR3 SINE MIR 82 196 -12 984 239 0 0 chr5 32561578 32561766 -167068384 - MER5A DNA MER1_type -1 188 1 445 259 161 0 chr5 32562065 32562177 -167067973 - MER45A DNA AcHobo -45 133 4 26 30 0 0 chr5 32562412 32562445 -167067705 + AT_rich Low_complexity Low_complexity 1 33 0 279 390 21 0 chr5 32562455 32562550 -167067600 + L2 LINE L2 3154 3250 -22 217 294 39 0 chr5 32562785 32562836 -167067314 + MIR SINE MIR 20 72 -190 352 333 22 7 chr5 32563247 32563385 -167066765 - Charlie8 DNA MER1_type -2277 140 1 975 224 25 57 chr5 32563645 32563926 -167066224 - MLT1A2 LTR MaLR -102 272 1 705 326 89 59 chr5 32564284 32565197 -167064953 - L2 LINE L2 -495 2819 1880 241 276 8 73 chr5 32567114 32567237 -167062913 - MIR SINE MIR -16 246 132 293 237 26 13 chr5 32567257 32567333 -167062817 + MIR3 SINE MIR 115 191 -17 2218 140 5 60 chr5 32567523 32567762 -167062388 - MLT1B LTR MaLR 0 390 182 2258 129 27 16 chr5 32567762 32568133 -167062017 + THE1C LTR MaLR 1 375 0 2218 140 5 60 chr5 32568133 32568306 -167061844 - MLT1B LTR MaLR -208 182 1 429 302 7 4 chr5 32568339 32568496 -167061654 - MIR3 SINE MIR -64 144 4 24 53 0 0 chr5 32569419 32569457 -167060693 + AT_rich Low_complexity Low_complexity 1 38 0 239 247 39 0 chr5 32570760 32570837 -167059313 - L1M4 LINE L1 -876 5270 5191 1744 109 37 56 chr5 32570852 32570976 -167059174 - L1MA5A LINE L1 -3 6936 6811 1738 108 119 4 chr5 32570976 32571236 -167058914 - AluSq SINE Alu -23 290 1 1744 109 37 56 chr5 32571236 32571432 -167058718 - L1MA5A LINE L1 -128 6811 6622 1668 131 4 69 chr5 32571434 32571854 -167058296 + MER1B DNA MER1_type 1 339 0 4243 139 19 16 chr5 32571854 32573224 -167056926 - L1MA5A LINE L1 -312 6627 5249 422 49 16 0 chr5 32573226 32573287 -167056863 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 7051 58 0 0 chr5 32573409 32574883 -167055267 + L1PA6 LINE L1 4685 6161 0 1322 201 63 26 chr5 32574904 32575173 -167054977 - AluJo SINE Alu -30 282 4 11417 183 23 17 chr5 32575175 32577600 -167052550 - L1MA5A LINE L1 -1532 5256 2818 765 187 0 29 chr5 32577617 32577756 -167052394 - FLAM_C SINE Alu -8 135 1 2158 188 39 0 chr5 32577761 32578203 -167051947 - L1MA5A LINE L1 -3962 2827 2369 6041 153 21 14 chr5 32578377 32579458 -167050692 - L1MA5A LINE L1 -4455 2334 1246 797 196 77 0 chr5 32579461 32579655 -167050495 - L1M4 LINE L1 -960 5186 4978 1444 236 40 9 chr5 32579656 32580004 -167050146 - MLT1A2 LTR MaLR -4 370 12 2681 216 14 14 chr5 32580015 32580622 -167049528 - L1M4 LINE L1 -1161 4985 4376 2360 86 0 29 chr5 32580622 32580937 -167049213 - AluY SINE Alu -5 306 1 2681 216 14 14 chr5 32580937 32580985 -167049165 - L1M4 LINE L1 -1769 4377 4330 21 71 0 0 chr5 32581042 32581084 -167049066 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr5 32581171 32581193 -167048957 + AT_rich Low_complexity Low_complexity 1 22 0 380 311 71 39 chr5 32581522 32581734 -167048416 + MIR SINE MIR 18 247 -15 300 255 0 41 chr5 32583488 32583586 -167046564 - MLT1I LTR MaLR -6 403 310 263 200 0 0 chr5 32583582 32583627 -167046523 - MLT1J1 LTR MaLR -136 310 266 * 314 283 42 25 chr5 32583715 32583835 -167046315 - MLT1J2 LTR MaLR -306 144 23 1020 290 127 20 chr5 32583908 32584424 -167045726 + L2 LINE L2 2739 3313 0 1865 228 64 19 chr5 32584708 32585218 -167044932 + MLT1F LTR MaLR 1 555 0 293 241 0 38 chr5 32585320 32585399 -167044751 - 7SK RNA RNA -116 77 2 191 359 0 43 chr5 32586257 32586349 -167043801 - L3b LINE CR1 -141 1442 1355 30144 111 10 59 chr5 32587872 32594334 -167035816 - L1PA7 LINE L1 -4 6150 12 21 0 0 0 chr5 32594642 32594663 -167035487 + AT_rich Low_complexity Low_complexity 1 21 0 2185 148 13 24 chr5 32594846 32595225 -167034925 - THE1C LTR MaLR 0 375 1 4098 159 126 33 chr5 32595230 32596614 -167033536 - THE1C-int LTR MaLR -5 1646 2 2225 119 16 49 chr5 32596615 32597001 -167033149 - THE1C LTR MaLR 0 375 3 274 289 99 60 chr5 32597181 32597349 -167032801 - LTR16C LTR ERVL -61 430 249 1036 230 5 0 chr5 32597349 32597571 -167032579 + MER58A DNA MER1_type 2 224 0 274 289 99 60 chr5 32597571 32597634 -167032516 - LTR16C LTR ERVL -242 249 190 612 266 192 6 chr5 32597894 32598283 -167031867 - L2 LINE L2 -2 3311 2705 240 237 18 53 chr5 32598285 32598298 -167031852 - L1MA10 LINE L1 0 6334 6322 2181 249 58 50 chr5 32598298 32599825 -167030325 - L1ME3 LINE L1 -1 6230 4700 435 259 89 19 chr5 32600052 32600369 -167029781 - L1ME3 LINE L1 -4551 1664 1441 314 338 89 67 chr5 32600411 32600937 -167029213 - L1ME3 LINE L1 -5551 845 308 390 288 12 35 chr5 32600985 32601155 -167028995 - L1ME3 LINE L1 -6194 202 37 2017 291 18 3 chr5 32601171 32601737 -167028413 - L2 LINE L2 -612 2702 2129 7123 55 5 70 chr5 32602145 32603298 -167026852 - L1PA6 LINE L1 -1 6153 5027 444 209 8 47 chr5 32604019 32604148 -167026002 + L1MC4 LINE L1 7797 7920 -122 263 250 15 0 chr5 32604151 32604219 -167025931 + GA-rich Low_complexity Low_complexity 2 70 0 180 200 0 0 chr5 32604327 32604367 -167025783 + (CA)n Simple_repeat Simple_repeat 1 40 0 352 265 11 119 chr5 32605093 32605278 -167024872 - MER5A DNA MER1_type -7 182 18 185 333 20 88 chr5 32605275 32605422 -167024728 - L2 LINE L2 -2 3270 3134 * 509 279 181 24 chr5 32605494 32605748 -167024402 - L2 LINE L2 -7 3306 3013 259 284 0 49 chr5 32605871 32605952 -167024198 + L2 LINE L2 3237 3313 0 2342 27 0 0 chr5 32606307 32606601 -167023549 - L1PA2 LINE L1 -995 5151 4858 * 4817 12 1 0 chr5 32606595 32607299 -167022851 + L1PA2 LINE L1 5125 5829 -326 2857 12 0 0 chr5 32607415 32607764 -167022386 + L1PA2 LINE L1 5833 6181 0 2619 191 17 65 chr5 32607902 32608545 -167021605 + LTR9 LTR ERV1 1 612 0 996 214 38 47 chr5 32608565 32608882 -167021268 + LTR9 LTR ERV1 299 612 0 3942 143 18 10 chr5 32609823 32610528 -167019622 + MER50 LTR ERV1 1 711 -23 234 352 21 4 chr5 32610926 32611047 -167019103 - MIR SINE MIR -67 141 32 234 313 38 0 chr5 32611371 32611451 -167018699 + MIR SINE MIR 64 146 -62 6218 87 11 2 chr5 32612920 32614220 -167015930 - L1PA12 LINE L1 -1 6167 4855 1011 179 10 0 chr5 32614223 32614430 -167015720 + L1PA12 LINE L1 4644 4852 -1294 21 0 0 0 chr5 32615214 32615235 -167014915 + AT_rich Low_complexity Low_complexity 1 21 0 2069 237 86 28 chr5 32615379 32615488 -167014662 - L1MB7 LINE L1 -16 6168 6067 2138 136 0 7 chr5 32615488 32615790 -167014360 - AluSx SINE Alu -12 300 1 2069 237 86 28 chr5 32615790 32617121 -167013029 - L1MB7 LINE L1 -117 6067 4631 688 71 0 0 chr5 32617121 32617220 -167012930 - L1PB1 LINE L1 0 6151 6053 2069 237 86 28 chr5 32617220 32617360 -167012790 - L1MB7 LINE L1 -1553 4631 4501 * 2895 33 0 0 chr5 32617358 32617721 -167012429 + L1P LINE L1 3547 3909 -2237 814 169 0 0 chr5 32617801 32617925 -167012225 - AluSq/x SINE Alu -188 124 1 928 224 72 63 chr5 32617926 32618399 -167011751 - L1MB7 LINE L1 -1661 4485 4009 345 282 68 26 chr5 32618399 32618516 -167011634 - L1MCa LINE L1 -4050 2376 2255 512 281 25 51 chr5 32618743 32619096 -167011054 + L1M4 LINE L1 4890 5233 -913 1624 35 19 47 chr5 32619534 32619790 -167010360 + L1PA2 LINE L1 5907 6155 0 204 67 0 0 chr5 32619804 32619834 -167010316 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 30 0 0 0 chr5 32620144 32620174 -167009976 + AT_rich Low_complexity Low_complexity 1 30 0 440 217 217 15 chr5 32620212 32620415 -167009735 - L1ME2 LINE L1 -9 6155 5912 224 277 26 77 chr5 32620660 32620790 -167009360 + MIR SINE MIR 26 144 -64 364 200 13 0 chr5 32621170 32621245 -167008905 - MER69 DNA AcHobo 0 2526 2451 * 588 229 36 7 chr5 32621243 32621383 -167008767 - MER69 DNA AcHobo -1079 147 4 1262 146 4 34 chr5 32622973 32623206 -167006944 - AluJb SINE Alu -2 310 85 3228 56 5 12 chr5 32623494 32623921 -167006229 - L1PA4 LINE L1 0 6155 5732 23 33 0 0 chr5 32624083 32624113 -167006037 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr5 32624139 32624163 -167005987 + AT_rich Low_complexity Low_complexity 1 24 0 1625 153 57 45 chr5 32624198 32624531 -167005619 - MER44D DNA MER2_type -2 607 1 213 312 128 37 chr5 32624817 32624926 -167005224 + L2 LINE L2 3153 3271 -1 375 321 170 0 chr5 32625520 32625679 -167004471 + L3 LINE CR1 334 519 -1058 337 287 35 21 chr5 32625719 32625862 -167004288 - L1ME3A LINE L1 -15 6155 6011 926 295 46 34 chr5 32625956 32626430 -167003720 - L1ME3A LINE L1 -208 5962 5483 5153 31 5 2 chr5 32626536 32627630 -167002520 - L1PA4 LINE L1 -260 5895 4796 374 306 30 17 chr5 32627631 32627928 -167002222 + L1M4 LINE L1 2522 2822 -3324 573 254 8 8 chr5 32628326 32628460 -167001690 - MIR SINE MIR -67 195 62 446 294 25 6 chr5 32630240 32630403 -166999747 - MARNA DNA Mariner -13 573 408 24 0 0 0 chr5 32630449 32630473 -166999677 + AT_rich Low_complexity Low_complexity 1 24 0 214 286 86 0 chr5 32630710 32630780 -166999370 - L2 LINE L2 -9 3263 3188 342 280 30 15 chr5 32630789 32630921 -166999229 - MARNA DNA Mariner -368 218 85 417 237 38 15 chr5 32631057 32631188 -166998962 - MER94 DNA DNA 0 134 1 805 257 22 6 chr5 32631480 32631663 -166998487 + MIR SINE MIR 16 201 -61 251 337 93 54 chr5 32631798 32632003 -166998147 - L2 LINE L2 -43 3229 3017 3721 42 0 19 chr5 32632105 32632577 -166997573 - L1PA5 LINE L1 -1 6153 5691 2196 91 0 17 chr5 32632578 32632865 -166997285 - AluY SINE Alu -29 282 1 247 278 28 65 chr5 32634259 32634367 -166995783 - MIR SINE MIR -11 251 148 1838 129 0 58 chr5 32635003 32635161 -166994989 - AluJo SINE Alu -21 291 158 2249 110 0 7 chr5 32635161 32635461 -166994689 - AluSq SINE Alu -13 300 3 1838 129 0 58 chr5 32635461 32635611 -166994539 - AluJo SINE Alu -154 158 1 272 340 0 10 chr5 32635639 32635736 -166994414 - MIR3 SINE MIR -9 199 104 536 341 44 6 chr5 32635896 32636078 -166994072 - MIR3 SINE MIR -12 196 8 2043 123 68 0 chr5 32636750 32637042 -166993108 + AluSx SINE Alu 1 312 0 393 159 0 0 chr5 32637068 32637137 -166993013 + L1MA9 LINE L1 6239 6307 -5 2458 170 29 0 chr5 32637147 32637630 -166992520 + L1MB7 LINE L1 5661 6157 -27 465 161 92 0 chr5 32637747 32637877 -166992273 + L1MB7 LINE L1 6032 6173 -11 272 158 18 0 chr5 32637877 32637934 -166992216 + GA-rich Low_complexity Low_complexity 5 62 0 822 153 6 12 chr5 32637945 32638115 -166992035 + GA-rich Low_complexity Low_complexity 2 170 0 661 267 148 18 chr5 32638305 32638582 -166991568 - L2 LINE L2 -2 3311 2999 638 279 98 80 chr5 32639024 32639537 -166990613 - LTR33A LTR ERVL 0 523 2 314 335 30 55 chr5 32639580 32639780 -166990370 - MIR SINE MIR -19 243 49 205 182 0 0 chr5 32639820 32639864 -166990286 + (TA)n Simple_repeat Simple_repeat 1 44 0 890 189 0 30 chr5 32639898 32640062 -166990088 - AluJb SINE Alu -18 294 136 1598 165 3 49 chr5 32640066 32640393 -166989757 - AluJb SINE Alu 0 312 1 2380 89 0 3 chr5 32641082 32641384 -166988766 - AluSg SINE Alu -9 301 1 26 30 0 0 chr5 32641410 32641443 -166988707 + AT_rich Low_complexity Low_complexity 1 33 0 2627 58 0 0 chr5 32641443 32641772 -166988378 - L1PA4 LINE L1 -3 6152 5824 1843 187 56 58 chr5 32642194 32642696 -166987454 + MLT1D LTR MaLR 5 505 0 2379 82 0 16 chr5 32642758 32643074 -166987076 + AluY SINE Alu 1 311 0 624 284 100 38 chr5 32643084 32643404 -166986746 - MLT1J2 LTR MaLR -1 449 110 653 220 41 86 chr5 32643454 32643745 -166986405 + MLT1D LTR MaLR 5 282 -223 464 216 32 16 chr5 32643744 32643869 -166986281 - MLT1J2 LTR MaLR -323 127 1 * 236 291 0 0 chr5 32644013 32644102 -166986048 + MIR SINE MIR 79 166 -74 282 208 39 0 chr5 32644277 32644354 -166985796 - MER116 DNA Mariner 0 80 1 515 240 71 39 chr5 32644493 32644647 -166985503 + L2 LINE L2 3154 3312 -1 363 330 98 15 chr5 32644978 32645181 -166984969 - L3b LINE CR1 -80 1503 1284 21 0 0 0 chr5 32645634 32645655 -166984495 + AT_rich Low_complexity Low_complexity 1 21 0 1115 60 13 0 chr5 32647245 32647395 -166982755 + MER4E LTR ERV1 1 152 -627 2749 158 91 24 chr5 32647395 32647969 -166982181 - LTR9 LTR ERV1 0 612 1 * 3456 137 39 30 chr5 32647969 32648590 -166981560 + MER4E LTR ERV1 153 779 0 1536 139 35 4 chr5 32649758 32650016 -166980134 - Tigger4(Zombi) DNA MER2_type 0 2731 2466 196 336 104 32 chr5 32650325 32650545 -166979605 - L3b LINE CR1 -226 1357 1122 699 267 208 24 chr5 32650910 32651329 -166978821 - L2 LINE L2 -1625 1689 1194 5648 81 20 44 chr5 32651837 32652341 -166977809 - L1PA12 LINE L1 -1 6167 5693 2200 115 0 0 chr5 32652341 32652629 -166977521 - AluSx SINE Alu -23 289 2 5648 81 20 44 chr5 32652629 32653028 -166977122 - L1PA12 LINE L1 -475 5693 5286 196 315 82 0 chr5 32653673 32653746 -166976404 + L2 LINE L2 2768 2846 -468 24 67 0 0 chr5 32653940 32653985 -166976165 + AT_rich Low_complexity Low_complexity 1 45 0 1917 158 39 34 chr5 32654481 32654866 -166975284 - MLT1B LTR MaLR -2 388 2 1421 234 31 45 chr5 32657655 32658073 -166972077 + MER92A LTR ERV1 1 412 0 939 284 82 0 chr5 32658073 32658425 -166971725 + L1ME3A LINE L1 5787 6167 -3 188 0 74 0 chr5 32658591 32658618 -166971532 + (TTTAA)n Simple_repeat Simple_repeat 5 33 0 2399 154 34 10 chr5 32658703 32659119 -166971031 - MSTB LTR MaLR 0 426 1 194 341 91 17 chr5 32659758 32659934 -166970216 - L2 LINE L2 -605 2709 2521 186 301 75 60 chr5 32660169 32660302 -166969848 + L2 LINE L2 3171 3305 -8 1459 247 79 69 chr5 32660344 32661262 -166968888 - L1MEc LINE L1 -2921 3294 2413 2733 187 52 9 chr5 32661262 32661802 -166968348 - MLT1F1 LTR MaLR -4 563 1 1459 247 79 69 chr5 32661802 32662050 -166968100 - L1MEc LINE L1 -3802 2413 2169 21 0 0 0 chr5 32662371 32662392 -166967758 + AT_rich Low_complexity Low_complexity 1 21 0 350 315 101 11 chr5 32662454 32662632 -166967518 - MIR SINE MIR -62 200 7 465 53 0 149 chr5 32663426 32663465 -166966685 + MADE1 DNA Mariner 1 20 -60 2395 90 3 0 chr5 32663465 32663766 -166966384 - AluSx SINE Alu -10 302 1 465 53 0 149 chr5 32663766 32663820 -166966330 + MADE1 DNA Mariner 20 80 0 1932 161 33 19 chr5 32665434 32665794 -166964356 - MLT1A1 LTR MaLR 0 365 1 411 247 19 56 chr5 32666071 32666233 -166963917 + MLT1D LTR MaLR 1 156 -349 348 167 28 0 chr5 32666232 32666304 -166963846 - MLT1F1 LTR MaLR -470 97 24 * 306 170 0 0 chr5 32666322 32666375 -166963775 - MLT1F1 LTR MaLR -52 415 363 572 160 20 0 chr5 32666379 32666479 -166963671 - MLT1F1 LTR MaLR -377 190 89 209 83 28 0 chr5 32666821 32666857 -166963293 + (CAAAA)n Simple_repeat Simple_repeat 5 41 0 2579 131 9 14 chr5 32667061 32667490 -166962660 - L1M1 LINE L1 -508 5797 5371 195 340 189 0 chr5 32668534 32668640 -166961510 + L2 LINE L2 3141 3266 -6 301 260 158 63 chr5 32669524 32669651 -166960499 + MIR SINE MIR 47 185 -77 1583 212 11 8 chr5 32672160 32672518 -166957632 - L1MC1 LINE L1 0 6333 5975 930 214 79 38 chr5 32672690 32673133 -166957017 - L1M4 LINE L1 -1548 4598 4138 1058 243 71 58 chr5 32673246 32673835 -166956315 - L1M4 LINE L1 -2446 3700 3104 906 184 7 0 chr5 32674284 32674431 -166955719 - FRAM SINE Alu -23 153 6 1448 198 0 11 chr5 32674437 32674700 -166955450 - AluJo SINE Alu -13 299 40 207 0 0 0 chr5 32674701 32674724 -166955426 + (A)n Simple_repeat Simple_repeat 1 23 0 770 167 0 8 chr5 32674745 32674877 -166955273 - FLAM_C SINE Alu -2 131 1 217 163 0 20 chr5 32674885 32674934 -166955216 + T-rich Low_complexity Low_complexity 1 48 0 354 155 206 21 chr5 32676072 32676169 -166953981 - MIR SINE MIR -58 204 90 3606 142 43 64 chr5 32676610 32677393 -166952757 - L1MC2 LINE L1 0 6344 5578 255 206 0 0 chr5 32677393 32677456 -166952694 + L1M4 LINE L1 4408 4470 -1676 1359 188 20 112 chr5 32677462 32677961 -166952189 - L1MC2 LINE L1 -1709 4437 3985 2652 7 3 10 chr5 32678636 32678934 -166951216 - AluYa5 SINE Alu -15 296 1 304 285 36 29 chr5 32679424 32679561 -166950589 - L1M4 LINE L1 -1037 5109 4972 2909 155 38 4 chr5 32679561 32680152 -166949998 + MER4B LTR ERV1 1 779 0 1150 259 46 35 chr5 32680152 32680235 -166949915 - L1M4 LINE L1 -1171 4975 4894 2216 63 30 20 chr5 32680235 32680534 -166949616 + AluY SINE Alu 1 302 -9 1150 259 46 35 chr5 32680534 32680990 -166949160 - L1M4 LINE L1 -1252 4894 4430 265 298 0 18 chr5 32681061 32681118 -166949032 - L2 LINE L2 -69 3203 3148 956 216 168 17 chr5 32681691 32681717 -166948433 - L1MC4 LINE L1 -21 8021 8000 2483 156 24 5 chr5 32681717 32682135 -166948015 + MSTB LTR MaLR 1 426 0 956 216 168 17 chr5 32682135 32682465 -166947685 - L1MC4 LINE L1 -42 8000 7611 741 162 48 79 chr5 32682939 32683133 -166947017 + LTR1B LTR ERV1 1 188 -638 312 102 0 0 chr5 32683133 32683182 -166946968 + (CA)n Simple_repeat Simple_repeat 2 50 0 741 162 48 79 chr5 32683182 32683216 -166946934 + LTR1B LTR ERV1 188 222 -604 36 70 0 0 chr5 32683800 32683871 -166946279 + AT_rich Low_complexity Low_complexity 1 71 0 1711 162 21 18 chr5 32683872 32684205 -166945945 - L1PA16 LINE L1 -18 6148 5815 448 125 0 0 chr5 32684198 32684278 -166945872 - L1 LINE L1 -1519 4627 4548 * 1665 142 7 84 chr5 32684273 32684689 -166945461 - L1PA16 LINE L1 -337 5819 5436 3013 165 45 13 chr5 32684689 32685398 -166944752 - L1 LINE L1 -863 5283 4552 623 239 63 9 chr5 32685498 32685720 -166944430 - L1MEc LINE L1 -3150 3065 2832 * 830 244 121 20 chr5 32685719 32686109 -166944041 - L1MEc LINE L1 -4233 2163 1735 371 278 91 62 chr5 32686137 32686655 -166943495 - L1MEc LINE L1 -4761 1635 1103 1198 268 127 43 chr5 32686711 32686866 -166943284 - L1MEc LINE L1 -5426 970 829 2098 132 0 0 chr5 32686866 32687155 -166942995 - AluSx SINE Alu -15 297 9 1198 268 127 43 chr5 32687155 32687679 -166942471 - L1MEc LINE L1 -5567 829 234 581 161 48 151 chr5 32688921 32689212 -166940938 - LTR33A LTR ERVL -37 486 226 440 266 66 73 chr5 32689189 32689294 -166940856 - LTR33A LTR ERVL -239 284 180 * 357 24 0 0 chr5 32689294 32689336 -166940814 + (TG)n Simple_repeat Simple_repeat 2 43 0 440 266 66 73 chr5 32689336 32689516 -166940634 - LTR33A LTR ERVL -343 180 1 584 61 0 12 chr5 32689670 32689752 -166940398 + (TGGA)n Simple_repeat Simple_repeat 2 82 0 1484 146 22 4 chr5 32690510 32690785 -166939365 + L1MC3 LINE L1 7485 7764 -21 233 214 18 0 chr5 32690857 32690913 -166939237 - Charlie4 DNA MER1_type 0 1961 1905 360 273 14 50 chr5 32691092 32691149 -166939001 + MER94 DNA DNA 1 59 -75 1938 97 7 37 chr5 32691149 32691449 -166938701 + AluY SINE Alu 2 292 -19 360 273 14 50 chr5 32691449 32691530 -166938620 + MER94 DNA DNA 59 134 0 5126 113 16 5 chr5 32691923 32692840 -166937310 - L1PB1 LINE L1 -108 6043 5116 2238 120 47 3 chr5 32693562 32693945 -166936205 - L1MA6 LINE L1 -351 5949 5550 617 322 172 30 chr5 32694243 32694836 -166935314 + L3 LINE CR1 845 1521 -56 24 0 0 0 chr5 32694942 32694966 -166935184 + AT_rich Low_complexity Low_complexity 1 24 0 280 341 48 16 chr5 32695659 32695785 -166934365 - MIR SINE MIR -62 146 17 186 43 0 0 chr5 32696074 32696097 -166934053 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 867 227 115 38 chr5 32696492 32696945 -166933205 - L1M1 LINE L1 -3975 3590 3103 778 141 22 87 chr5 32696947 32697131 -166933019 + Tigger4(Zombi) DNA MER2_type 1 172 -2559 3172 103 33 33 chr5 32697135 32697687 -166932463 + Tigger4(Zombi) DNA MER2_type 2180 2731 0 1967 258 47 18 chr5 32697722 32698517 -166931633 - L1M2 LINE L1 -4172 2039 1212 921 259 116 19 chr5 32701055 32701476 -166928674 + LTR16B LTR ERVL 3 464 0 862 124 7 36 chr5 32702608 32702745 -166927405 + AluJb SINE Alu 1 133 -179 564 265 94 36 chr5 32702783 32703006 -166927144 - MIR SINE MIR -25 237 2 1454 102 57 4 chr5 32704024 32704269 -166925881 + AluY SINE Alu 1 258 -53 468 223 129 77 chr5 32704415 32704648 -166925502 + LTR28 LTR ERV1 582 1019 0 191 372 13 0 chr5 32704874 32704952 -166925198 + L2 LINE L2 2454 2532 -782 3871 261 71 48 chr5 32704972 32705901 -166924249 + L1MEc LINE L1 29 935 -5461 2125 131 0 0 chr5 32705901 32706198 -166923952 + AluSq SINE Alu 1 297 -16 3871 261 71 48 chr5 32706198 32707187 -166922963 + L1MEc LINE L1 935 1991 -4405 5115 226 65 60 chr5 32707247 32709012 -166921138 + L1M4 LINE L1 87 1936 -4710 2335 73 0 0 chr5 32709012 32709301 -166920849 + AluY SINE Alu 17 305 -6 5115 226 65 60 chr5 32709301 32710004 -166920146 + L1M4 LINE L1 1936 2634 -4012 1100 117 166 54 chr5 32710000 32710026 -166920124 + L1M2 LINE L1 5144 5166 -1131 * 293 47 23 0 chr5 32710026 32710069 -166920081 + (CAA)n Simple_repeat Simple_repeat 3 46 0 1100 117 166 54 chr5 32710069 32710528 -166919622 + L1M2 LINE L1 5166 5670 -627 2747 229 75 10 chr5 32710763 32711801 -166918349 - L1M2 LINE L1 -4986 1155 1 299 311 126 40 chr5 32712229 32712451 -166917699 + LTR33A LTR ERVL 61 301 -222 1855 192 156 0 chr5 32713053 32713490 -166916660 + MLT1D LTR MaLR 1 505 0 325 227 10 41 chr5 32714043 32714140 -166916010 + CT-rich Low_complexity Low_complexity 2 95 0 1742 192 10 10 chr5 32714466 32714778 -166915372 - AluJo SINE Alu 0 312 1 21 0 0 0 chr5 32714889 32714910 -166915240 + AT_rich Low_complexity Low_complexity 1 21 0 7185 31 16 2 chr5 32715530 32716806 -166913344 + L1PA3 LINE L1 4868 6155 0 208 278 111 0 chr5 32717445 32717517 -166912633 + MIR SINE MIR 63 142 -120 23 33 0 0 chr5 32718256 32718286 -166911864 + AT_rich Low_complexity Low_complexity 1 30 0 336 299 277 11 chr5 32718323 32718594 -166911556 + L1MEd LINE L1 27 369 -5750 24 67 0 0 chr5 32718601 32718646 -166911504 + AT_rich Low_complexity Low_complexity 1 45 0 973 204 51 37 chr5 32718777 32718993 -166911157 - AluJo SINE Alu -21 291 73 562 286 49 30 chr5 32719338 32719541 -166910609 - MIR SINE MIR -21 241 35 24 0 0 0 chr5 32719949 32719973 -166910177 + AT_rich Low_complexity Low_complexity 1 24 0 1229 134 15 5 chr5 32720693 32720894 -166909256 + MER20 DNA MER1_type 17 219 0 752 228 73 45 chr5 32721235 32721565 -166908585 - MSTD LTR MaLR 0 396 21 2098 222 32 5 chr5 32721681 32722122 -166908028 - MSTD-int LTR MaLR -170 1565 1113 378 187 0 0 chr5 32722136 32722211 -166907939 - MSTC LTR MaLR -353 75 1 22 0 0 0 chr5 32722763 32722785 -166907365 + AT_rich Low_complexity Low_complexity 1 22 0 256 310 17 26 chr5 32722940 32723056 -166907094 - L2 LINE L2 -248 3065 2951 387 258 25 8 chr5 32723092 32723212 -166906938 - MER117 DNA MER1_type -42 155 34 5837 214 14 21 chr5 32723539 32725385 -166904765 + L1HS LINE L1 3981 5789 -362 495 0 0 0 chr5 32725385 32725440 -166904710 + (TA)n Simple_repeat Simple_repeat 2 56 0 5837 214 14 21 chr5 32725440 32725800 -166904350 + L1HS LINE L1 5789 6150 -1 194 296 14 0 chr5 32726130 32726201 -166903949 - MIR SINE MIR -135 127 56 231 324 145 17 chr5 32726371 32726550 -166903600 - L2 LINE L2 -363 2951 2750 531 243 138 28 chr5 32726905 32727123 -166903027 + MIR SINE MIR 21 262 0 386 313 136 28 chr5 32727463 32727639 -166902511 + MIR3 SINE MIR 6 200 -8 230 319 77 0 chr5 32727997 32728088 -166902062 - L2 LINE L2 -327 2986 2889 236 291 18 3 chr5 32729256 32729344 -166900806 - MIR SINE MIR -63 145 80 39 0 0 0 chr5 32729404 32729443 -166900707 + AT_rich Low_complexity Low_complexity 1 39 0 518 239 103 29 chr5 32729570 32729903 -166900247 - LTR33 LTR ERVL -8 513 99 1764 279 104 23 chr5 32729937 32730838 -166899312 + L2 LINE L2 2206 3179 -134 2697 7 0 10 chr5 32731216 32731515 -166898635 - AluYa5 SINE Alu -15 296 1 2086 114 132 26 chr5 32732153 32732540 -166897610 + MSTA LTR MaLR 1 428 0 28 29 0 0 chr5 32733829 32733864 -166896286 + AT_rich Low_complexity Low_complexity 1 35 0 2297 88 3 0 chr5 32734105 32734401 -166895749 + AluY SINE Alu 1 297 -14 1997 229 96 21 chr5 32734657 32735274 -166894876 + L1MCb LINE L1 8 670 -5375 259 143 0 61 chr5 32735349 32735398 -166894752 + MLT2F LTR ERVL 583 663 0 635 163 37 0 chr5 32735412 32735547 -166894603 + L1MA8 LINE L1 6152 6291 0 294 239 0 0 chr5 32736085 32736156 -166893994 + ERVL LTR ERVL 853 923 -4841 2109 208 68 139 chr5 32736156 32737337 -166892813 - MER52A LTR ERV1 0 1755 659 252 217 17 0 chr5 32737471 32737531 -166892619 - MSTD LTR MaLR 0 396 336 7059 206 79 63 chr5 32737586 32740093 -166890057 - MER109 Unknown Unknown -80 2352 1 29 0 0 0 chr5 32740678 32740707 -166889443 + AT_rich Low_complexity Low_complexity 1 29 0 904 263 50 50 chr5 32740709 32741047 -166889103 - MSTD LTR MaLR -56 340 3 3441 274 43 39 chr5 32741053 32742442 -166887708 + ERVL LTR ERVL 1065 2497 -3267 291 302 0 12 chr5 32743174 32743260 -166886890 - ERVL LTR ERVL -4340 1424 1340 1258 158 64 63 chr5 32743706 32744093 -166886057 + L1MA4 LINE L1 5550 5939 -361 1879 148 24 30 chr5 32744339 32744441 -166885709 + L1MA4 LINE L1 5925 6026 -274 2416 101 0 26 chr5 32744441 32744787 -166885363 - MER1B DNA MER1_type 0 337 1 1879 148 24 30 chr5 32744787 32745057 -166885093 + L1MA4 LINE L1 6026 6295 -5 5543 242 20 102 chr5 32745194 32747450 -166882700 + L1M2a LINE L1 399 2470 -5096 2984 242 42 9 chr5 32747438 32748765 -166881385 + L1M2a LINE L1 2374 3752 -3813 * 9842 201 50 4 chr5 32749018 32751488 -166878662 + L1M2a LINE L1 3798 6380 -1185 860 256 115 33 chr5 32751651 32752162 -166877988 + MLT1G3 LTR MaLR 1 590 0 303 251 204 47 chr5 32752313 32752504 -166877646 + MIR SINE MIR 1 221 -41 727 89 9 0 chr5 32753683 32753816 -166876334 - L1PA2 LINE L1 0 6155 6043 3517 29 4 4 chr5 32753816 32754266 -166875884 + L1PA3 LINE L1 5413 5862 -293 4016 218 73 14 chr5 32754682 32756302 -166873848 - L1M4c LINE L1 -4550 2409 663 1409 237 93 14 chr5 32756319 32756584 -166873566 - MLT1C LTR MaLR 0 467 154 2327 95 0 22 chr5 32756584 32756900 -166873250 - AluSc SINE Alu 0 309 1 1409 237 93 14 chr5 32756900 32757065 -166873085 - MLT1C LTR MaLR -313 154 3 1807 208 26 8 chr5 32757166 32757546 -166872604 - MSTD LTR MaLR -3 393 7 4067 146 27 3 chr5 32757840 32758534 -166871616 + MER50 LTR ERV1 1 711 -23 1350 216 17 36 chr5 32758812 32759173 -166870977 + MLT1A1 LTR MaLR 1 354 -11 454 286 146 12 chr5 32759185 32759356 -166870794 - MIR SINE MIR -49 213 20 981 258 15 74 chr5 32759989 32760173 -166869977 + L1M3b LINE L1 8 166 -6115 2248 75 4 4 chr5 32760173 32760481 -166869669 + AluY SINE Alu 1 308 0 981 258 15 74 chr5 32760481 32760632 -166869518 + L1M3b LINE L1 166 324 -5957 11146 212 41 57 chr5 32760862 32764263 -166865887 + L1M3b LINE L1 344 3799 -2551 270 120 200 0 chr5 32764263 32764313 -166865837 + 5S rRNA rRNA 32 91 -30 11146 212 41 57 chr5 32764313 32765619 -166864531 + L1M3b LINE L1 3799 5125 -1225 1989 149 0 0 chr5 32765619 32766035 -166864115 + AluSx SINE Alu 1 312 0 11146 212 41 57 chr5 32766035 32766181 -166863969 + L1M3b LINE L1 5125 5272 -1078 1980 151 73 14 chr5 32766181 32766525 -166863625 - THE1B LTR MaLR 0 364 1 11542 103 9 0 chr5 32766525 32768091 -166862059 - THE1B-int LTR MaLR 0 1580 1 1876 131 125 18 chr5 32768091 32768420 -166861730 - THE1B LTR MaLR 0 364 1 11146 212 41 57 chr5 32768420 32768626 -166861524 + L1M3b LINE L1 4842 5050 -1300 1026 16 0 16 chr5 32768626 32768746 -166861404 + L1PA2 LINE L1 6028 6148 -7 2284 81 3 10 chr5 32768867 32769162 -166860988 + AluSx SINE Alu 1 293 -19 189 0 0 0 chr5 32770625 32770646 -166859504 + (T)n Simple_repeat Simple_repeat 1 21 0 42083 40 1 0 chr5 32770708 32776858 -166853292 - L1PA2 LINE L1 -1 6154 2 16540 185 27 9 chr5 32776860 32777122 -166853028 - L1PA15-16 LINE L1 -3049 3800 3544 2187 99 3 7 chr5 32777122 32777432 -166852718 - AluSp SINE Alu 0 309 1 16540 185 27 9 chr5 32777432 32780893 -166849257 - L1PA15-16 LINE L1 -3305 3544 5 3172 219 29 25 chr5 32780918 32781155 -166848995 - L1 LINE L1 -2994 3854 3620 2023 150 127 18 chr5 32781155 32781541 -166848609 - MSTA LTR MaLR 0 428 1 3172 219 29 25 chr5 32781541 32781980 -166848170 - L1 LINE L1 -3228 3620 3185 2664 129 31 12 chr5 32781980 32782400 -166847750 + MSTA LTR MaLR 1 428 0 8545 190 23 4 chr5 32782400 32784018 -166846132 + MSTA-int LTR MaLR 1 1649 -2 2713 129 24 7 chr5 32784022 32784441 -166845709 + MSTA LTR MaLR 3 428 0 3172 219 29 25 chr5 32784441 32784905 -166845245 - L1 LINE L1 -3665 3183 2701 6141 96 20 10 chr5 32784925 32786186 -166843964 - L1PA10 LINE L1 0 6168 4899 312 27 0 0 chr5 32786186 32786223 -166843927 + (TG)n Simple_repeat Simple_repeat 1 37 0 1447 319 66 26 chr5 32786421 32787030 -166843120 - L1 LINE L1 -6156 693 61 * 6185 209 31 44 chr5 32787025 32787978 -166842172 - L1M4 LINE L1 -1487 4659 3738 6002 153 52 28 chr5 32787978 32788231 -166841919 - Tigger3b DNA MER2_type -1798 1230 985 1991 141 0 3 chr5 32788231 32788556 -166841594 + AluSx SINE Alu 1 324 0 6002 153 52 28 chr5 32788556 32789501 -166840649 - Tigger3b DNA MER2_type -2043 985 1 6185 209 31 44 chr5 32789501 32790354 -166839796 - L1M4 LINE L1 -2408 3738 2876 7881 205 49 24 chr5 32790539 32791330 -166838820 - L1MCa LINE L1 -3050 3376 2606 533 118 11 0 chr5 32791330 32791423 -166838727 + L1PB1 LINE L1 6058 6151 0 7881 205 49 24 chr5 32791423 32793431 -166836719 - L1MCa LINE L1 -3820 2606 28 196 330 117 56 chr5 32793634 32793831 -166836319 - L2 LINE L2 -1155 2159 1951 824 256 43 0 chr5 32793838 32794072 -166836078 + L1MC4 LINE L1 6858 7101 -941 2117 226 27 59 chr5 32794073 32794648 -166835502 + MLT2B1 LTR ERVL 1 516 -4 1841 258 69 37 chr5 32794653 32795382 -166834768 + L1MC4 LINE L1 7099 7850 -192 328 240 110 0 chr5 32795389 32795489 -166834661 + L1MC4 LINE L1 7930 8040 -2 1121 120 25 0 chr5 32797425 32797583 -166832567 + FRAM SINE Alu 1 161 -15 42029 39 25 3 chr5 32797585 32803422 -166826728 + L1PA4 LINE L1 1 5966 -189 2321 216 36 65 chr5 32803882 32804684 -166825466 + L1 LINE L1 2137 2915 -3231 992 182 42 84 chr5 32804683 32804728 -166825422 + L1MB8 LINE L1 5875 5920 -258 * 289 74 19 19 chr5 32804728 32804782 -166825368 + (AATAG)n Simple_repeat Simple_repeat 2 55 0 992 182 42 84 chr5 32804782 32805044 -166825106 + L1MB8 LINE L1 5920 6169 -9 244 139 0 0 chr5 32805453 32805489 -166824661 - MLT1L LTR MaLR -526 89 54 3330 214 11 6 chr5 32805629 32806279 -166823871 + MER82 DNA MER2_type 1 653 0 752 259 86 56 chr5 32806341 32806750 -166823400 + MLT1J1 LTR MaLR 26 446 0 294 301 79 122 chr5 32807520 32807978 -166822172 - L2 LINE L2 -10 3262 2825 850 281 38 25 chr5 32808630 32808957 -166821193 + MLT1J1 LTR MaLR 1 332 -114 325 243 0 0 chr5 32809033 32809103 -166821047 + Tigger5 DNA MER2_type 2248 2317 -6 2354 92 0 0 chr5 32809270 32809564 -166820586 - AluSc SINE Alu -10 299 6 2473 58 0 3 chr5 32810362 32810657 -166819493 - AluY SINE Alu -13 298 5 236 316 171 8 chr5 32810838 32810955 -166819195 + L2 LINE L2 3137 3272 0 239 321 28 9 chr5 32813395 32813504 -166816646 - MIR SINE MIR -8 254 144 423 241 92 63 chr5 32813573 32813773 -166816377 + MLT1L LTR MaLR 119 391 -224 384 331 40 0 chr5 32813945 32814069 -166816081 - MIR SINE MIR -114 148 20 4541 194 28 2 chr5 32814069 32814941 -166815209 + L1 LINE L1 3519 4418 -1728 279 54 0 0 chr5 32814941 32814978 -166815172 + (CA)n Simple_repeat Simple_repeat 2 38 0 4541 194 28 2 chr5 32814978 32815041 -166815109 + L1 LINE L1 4418 4478 -1668 3509 147 39 13 chr5 32815037 32815875 -166814275 - L1P4 LINE L1 -465 5701 4832 * 2134 124 0 16 chr5 32815875 32816189 -166813961 + AluSx SINE Alu 1 309 -3 3509 147 39 13 chr5 32816189 32816413 -166813737 - L1P4 LINE L1 -1334 4832 4615 2605 129 46 9 chr5 32816426 32816859 -166813291 + L1PA16 LINE L1 5707 6155 -11 2522 62 0 3 chr5 32816861 32817167 -166812983 + AluY SINE Alu 1 305 -6 432 0 0 0 chr5 32817713 32817761 -166812389 + (CA)n Simple_repeat Simple_repeat 1 48 0 1029 249 49 8 chr5 32817876 32818121 -166812029 + MIR SINE MIR 3 257 -5 234 0 0 0 chr5 32818624 32818650 -166811500 + (CAA)n Simple_repeat Simple_repeat 2 27 0 232 309 66 15 chr5 32819512 32819648 -166810502 + MLT1J2 LTR MaLR 67 209 -241 1355 217 72 154 chr5 32819667 32820304 -166809846 - L1ME2 LINE L1 -1 6163 5476 746 134 47 0 chr5 32820304 32820431 -166809719 + L1MB5 LINE L1 6033 6165 -9 1355 217 72 154 chr5 32820431 32820745 -166809405 - L1ME2 LINE L1 -688 5476 5322 1867 173 0 3 chr5 32820745 32821046 -166809104 - AluJb SINE Alu -12 300 1 1355 217 72 154 chr5 32821046 32821134 -166809016 - L1ME2 LINE L1 -842 5322 5228 287 222 0 16 chr5 32821900 32821963 -166808187 + Tigger5 DNA MER2_type 2261 2322 -1 505 193 9 46 chr5 32821995 32822104 -166808046 + Tigger5 DNA MER2_type 2219 2323 0 1365 241 46 9 chr5 32822107 32822543 -166807607 - L1ME2 LINE L1 -908 5238 4787 229 154 108 0 chr5 32822602 32822667 -166807483 - L1MC3 LINE L1 -16 7769 7698 * 2653 220 4 1 chr5 32822662 32823430 -166806720 - L1 LINE L1 -1258 5604 4681 380 169 0 0 chr5 32823417 32823488 -166806662 - L1 LINE L1 -2701 4161 4091 * 18415 111 56 6 chr5 32823480 32826812 -166803338 - L1PBa LINE L1 -3328 3534 36 4767 251 59 29 chr5 32826815 32827890 -166802260 - L1M4c LINE L1 -2136 4246 3204 2565 24 0 3 chr5 32827890 32828185 -166801965 - AluY SINE Alu -17 294 1 4767 251 59 29 chr5 32828185 32829863 -166800287 - L1M4c LINE L1 -3178 3204 1266 6809 52 7 6 chr5 32830561 32831882 -166798268 + L1PA6 LINE L1 4828 6152 -2 392 324 80 55 chr5 32831961 32832236 -166797914 + HAL1 LINE L1 2 283 -2224 1674 155 90 31 chr5 32832277 32832631 -166797519 - THE1C LTR MaLR 0 375 1 1397 257 77 80 chr5 32832669 32833723 -166796427 + HAL1 LINE L1 1455 2505 -2 1392 191 36 18 chr5 32833784 32834062 -166796088 + AluJo SINE Alu 1 283 -19 895 186 40 34 chr5 32834065 32834242 -166795908 - AluJo SINE Alu -134 178 1 3032 193 74 5 chr5 32834279 32835568 -166794582 - L1MA5 LINE L1 -7 6293 4734 58 59 0 8 chr5 32835592 32835626 -166794524 + AT_rich Low_complexity Low_complexity 1 34 -83 3041 150 63 7 chr5 32835626 32836198 -166793952 - L1PA16 LINE L1 -2 6815 6212 58 59 0 8 chr5 32836198 32836281 -166793869 + AT_rich Low_complexity Low_complexity 34 117 0 1757 103 7 15 chr5 32836292 32836565 -166793585 - L1PA16 LINE L1 -598 6218 5948 895 167 36 14 chr5 32836931 32837153 -166792997 - L1PA16 LINE L1 -815 5982 5756 4894 213 9 11 chr5 32837167 32838219 -166791931 - L1PA16 LINE L1 -1826 4971 3921 4336 230 39 15 chr5 32838214 32839419 -166790731 - L1PA16 LINE L1 -4381 2416 1173 * 2911 291 41 20 chr5 32839395 32840251 -166789899 - L1PA16 LINE L1 -5913 874 1 * 4493 216 16 10 chr5 32840268 32841025 -166789125 - L1 LINE L1 -1402 4744 3977 2061 137 3 0 chr5 32841025 32841317 -166788833 - AluSx SINE Alu -19 293 1 4493 216 16 10 chr5 32841317 32841601 -166788549 - L1 LINE L1 -2169 3977 3696 1415 213 0 0 chr5 32841601 32841859 -166788291 - AluJo SINE Alu -12 300 43 492 179 0 11 chr5 32841864 32841959 -166788191 - L1 LINE L1 -2451 3695 3602 6113 32 7 1 chr5 32842059 32842808 -166787342 + L1PA3 LINE L1 5292 6044 -111 1246 318 47 26 chr5 32842980 32843474 -166786676 - L2 LINE L2 0 3313 2810 3287 68 2 5 chr5 32844144 32844583 -166785567 + L1PA8 LINE L1 5727 6164 -8 26 0 0 0 chr5 32846621 32846647 -166783503 + AT_rich Low_complexity Low_complexity 1 26 0 1934 150 46 22 chr5 32846862 32847228 -166782922 - THE1C LTR MaLR 0 375 1 29 94 0 0 chr5 32848458 32848543 -166781607 + AT_rich Low_complexity Low_complexity 1 85 0 829 237 6 6 chr5 32848720 32848897 -166781253 - MER5B DNA MER1_type -1 177 1 1804 154 3 46 chr5 32848924 32849248 -166780902 - AluJb SINE Alu 0 312 3 2223 119 3 0 chr5 32849315 32849610 -166780540 + AluSx SINE Alu 1 296 -16 193 156 16 31 chr5 32851515 32851579 -166778571 + T-rich Low_complexity Low_complexity 3 65 0 399 98 0 0 chr5 32851787 32851848 -166778302 + (CA)n Simple_repeat Simple_repeat 1 61 0 195 301 88 37 chr5 32852841 32852977 -166777173 - L2 LINE L2 -3 3310 3168 2087 99 11 0 chr5 32853012 32853284 -166776866 + AluSx SINE Alu 34 308 -4 624 322 75 63 chr5 32853631 32854549 -166775601 - L2 LINE L2 -675 2639 1711 1831 88 18 29 chr5 32854575 32854847 -166775303 + AluSq SINE Alu 36 304 -9 213 351 113 33 chr5 32855031 32855367 -166774783 - L2 LINE L2 -1905 1409 1047 899 251 71 0 chr5 32855521 32855816 -166774334 + L1MC4a LINE L1 5613 5928 -1880 185 103 77 0 chr5 32855822 32855861 -166774289 + (CATATA)n Simple_repeat Simple_repeat 5 46 0 36 62 0 0 chr5 32855963 32856027 -166774123 + AT_rich Low_complexity Low_complexity 1 64 0 247 274 95 12 chr5 32857508 32857592 -166772558 + L2 LINE L2 3138 3228 -44 334 278 56 0 chr5 32857603 32857711 -166772439 + MIR SINE MIR 106 219 -43 336 357 32 54 chr5 32858136 32858321 -166771829 + L2 LINE L2 3092 3272 0 1167 232 46 32 chr5 32858325 32858609 -166771541 - AluJb SINE Alu -13 289 2 312 297 46 95 chr5 32858676 32859023 -166771127 + L2 LINE L2 2154 2483 -831 311 304 143 7 chr5 32859038 32859215 -166770935 + MIR SINE MIR 4 201 -61 327 306 75 52 chr5 32859960 32860094 -166770056 - L2 LINE L2 0 3272 3136 227 273 83 8 chr5 32860379 32860396 -166769754 - L1MA10 LINE L1 0 6334 6318 2815 219 136 31 chr5 32860396 32861573 -166768577 - L1ME2 LINE L1 -8 6156 4873 1873 166 33 6 chr5 32861636 32861973 -166768177 + MER46B DNA MER2_type 7 227 -9 2272 127 31 3 chr5 32862137 32862491 -166767659 + THE1B LTR MaLR 1 364 0 366 357 41 15 chr5 32862904 32863100 -166767050 - L1MEc LINE L1 -6031 365 165 279 348 64 0 chr5 32863174 32863315 -166766835 - L2 LINE L2 -559 2755 2606 675 241 89 59 chr5 32863330 32863566 -166766584 - MIR SINE MIR -5 257 15 2020 117 0 0 chr5 32863882 32864148 -166766002 + AluSx SINE Alu 17 282 -30 191 343 152 9 chr5 32865047 32865152 -166764998 + MIR SINE MIR 25 144 -118 1269 229 81 45 chr5 32865163 32865608 -166764542 + MLT1C LTR MaLR 7 467 0 261 0 0 0 chr5 32867526 32867555 -166762595 + (CA)n Simple_repeat Simple_repeat 2 30 0 2243 113 0 3 chr5 32867943 32868244 -166761906 - AluSq SINE Alu -13 300 1 9711 37 4 0 chr5 32868308 32870055 -166760095 + L1PA4 LINE L1 4202 5955 -200 6064 231 81 50 chr5 32870507 32871698 -166758452 + L1MC4a LINE L1 5192 6344 -1464 2260 132 28 6 chr5 32871698 32872054 -166758096 - THE1B LTR MaLR 0 364 1 6064 231 81 50 chr5 32872054 32873204 -166756946 + L1MC4a LINE L1 6344 7602 -206 207 276 81 35 chr5 32873418 32873505 -166756645 + L2 LINE L2 2528 2618 -696 2175 98 0 13 chr5 32923730 32924036 -166706114 - AluSg SINE Alu -8 302 1 2126 107 3 22 chr5 32924056 32924374 -166705776 - AluSx SINE Alu 0 312 1 351 168 0 134 chr5 32924437 32924556 -166705594 - AluSg/x SINE Alu 0 302 200 2058 105 11 7 chr5 32924651 32924937 -166705213 - AluSx SINE Alu -15 297 11 2551 156 3 12 chr5 32924945 32925584 -166704566 - MER72 LTR ERV1 -39 683 1 756 286 40 48 chr5 32926256 32926537 -166703613 + L1MC4a LINE L1 5422 5640 -481 2426 67 7 0 chr5 32926537 32926836 -166703314 - AluY SINE Alu -10 301 1 756 286 40 48 chr5 32926836 32927015 -166703135 + L1MC4a LINE L1 5640 5819 -302 189 294 59 0 chr5 32927317 32927368 -166702782 - MER5B DNA MER1_type 0 178 125 457 366 103 20 chr5 32928167 32928574 -166701576 - L1MC/D LINE L1 -2011 5797 5357 2142 94 3 11 chr5 32928577 32928864 -166701286 - AluSp SINE Alu -28 285 1 234 315 56 49 chr5 32929349 32929511 -166700639 + MER5A DNA MER1_type 21 183 -6 553 251 133 9 chr5 32929585 32929796 -166700354 - L2 LINE L2 -15 3298 3062 30 0 0 0 chr5 32930672 32930702 -166699448 + AT_rich Low_complexity Low_complexity 1 30 0 7547 80 17 0 chr5 32930705 32932525 -166697625 - L1PA7 LINE L1 -7 6147 4309 549 168 42 35 chr5 32932643 32932786 -166697364 - L1MC/D LINE L1 -805 5341 5198 261 146 0 0 chr5 32932795 32932843 -166697307 + (TTTTC)n Simple_repeat Simple_repeat 5 52 0 473 305 76 23 chr5 32933889 32934286 -166695864 + L1MC4 LINE L1 7602 8019 -23 1098 201 29 112 chr5 32936411 32936859 -166693291 + L1ME1 LINE L1 5751 6161 -5 294 226 22 58 chr5 32936870 32937007 -166693143 + L1M4 LINE L1 5199 5330 -816 386 312 80 34 chr5 32937022 32937285 -166692865 + L1MEc LINE L1 1906 2180 -4216 21 57 0 0 chr5 32937309 32937344 -166692806 + AT_rich Low_complexity Low_complexity 1 35 0 266 351 71 0 chr5 32937423 32937731 -166692419 + L1MEc LINE L1 1455 1784 -4612 288 0 0 0 chr5 32937744 32937776 -166692374 + (TG)n Simple_repeat Simple_repeat 2 33 0 372 237 15 67 chr5 32937826 32937961 -166692189 - LTR16A LTR ERVL -2 448 321 1652 233 70 38 chr5 32938288 32938638 -166691512 - MLT1E LTR MaLR -2 591 210 2303 175 26 7 chr5 32938638 32939056 -166691094 - MSTB LTR MaLR 0 426 1 1652 233 70 38 chr5 32939056 32939273 -166690877 - MLT1E LTR MaLR -383 210 1 23 54 0 0 chr5 32939596 32939633 -166690517 + AT_rich Low_complexity Low_complexity 1 37 0 273 286 11 11 chr5 32940598 32940689 -166689461 + MER96 DNA MER1_type? 85 175 0 255 114 0 0 chr5 32940834 32940878 -166689272 + (TA)n Simple_repeat Simple_repeat 2 45 0 205 288 14 0 chr5 32940891 32940964 -166689186 + (TA)n Simple_repeat Simple_repeat 1 74 0 2865 79 50 17 chr5 32941259 32941679 -166688471 - L1PA11 LINE L1 0 6174 5741 6040 95 18 6 chr5 32941791 32942897 -166687253 - L1PA11 LINE L1 -632 5542 4429 820 103 0 0 chr5 32942897 32943004 -166687146 - U6 snRNA snRNA 0 107 1 836 285 33 12 chr5 32943055 32943297 -166686853 - MIR SINE MIR -8 254 8 506 271 50 11 chr5 32943302 32943483 -166686667 - L1ME LINE L1 -330 5791 5604 502 298 12 6 chr5 32947428 32947596 -166682554 + LTR33 LTR ERVL 10 178 -343 290 236 79 14 chr5 32948548 32948688 -166681462 - MER113 DNA MER1_type? -372 149 1 1510 173 151 34 chr5 32948698 32949114 -166681036 + MLT1C LTR MaLR 1 465 -2 2242 90 0 3 chr5 32949130 32949418 -166680732 + AluY SINE Alu 13 299 -12 241 350 60 10 chr5 32949625 32949725 -166680425 + MIR SINE MIR 16 120 -88 204 133 50 0 chr5 32950431 32950491 -166679659 + (CAAAT)n Simple_repeat Simple_repeat 1 63 0 258 341 0 12 chr5 32950761 32950843 -166679307 - L2 LINE L2 -44 3228 3148 317 344 91 13 chr5 32950858 32951088 -166679062 - MIR SINE MIR -8 254 7 252 293 112 17 chr5 32952172 32952288 -166677862 - MIR SINE MIR -62 146 20 401 319 22 21 chr5 32952679 32952829 -166677321 + MIR SINE MIR 5 154 -69 333 281 29 29 chr5 32953200 32953371 -166676779 - L1ME LINE L1 -316 5805 5635 4278 21 0 0 chr5 32953877 32954399 -166675751 - L1P LINE L1 -1428 4718 4197 2409 141 73 2 chr5 32954499 32954939 -166675211 + MER31A LTR ERV1 15 485 0 216 362 0 64 chr5 32954939 32955033 -166675117 + MIR SINE MIR 45 132 -76 284 192 0 0 chr5 32955386 32955438 -166674712 + MER66A LTR ERV1 287 338 -140 237 319 50 39 chr5 32955712 32955894 -166674256 + Charlie2 DNA MER1_type 27 210 -2572 1416 130 40 0 chr5 32955894 32956147 -166674003 + L1MA5 LINE L1 5863 6125 -175 16491 56 4 11 chr5 32956157 32959108 -166671042 - L1PA6 LINE L1 -6 6148 3229 7644 27 1 0 chr5 32959103 32960534 -166669616 + L1PA4 LINE L1 4723 6155 0 * 741 294 70 36 chr5 32961420 32961804 -166668346 + LTR16A LTR ERVL 27 423 -27 186 43 0 0 chr5 32961825 32961848 -166668302 + (CAA)n Simple_repeat Simple_repeat 2 24 0 190 226 94 0 chr5 32962944 32962997 -166667153 - L3 LINE CR1 -1261 316 259 842 310 14 5 chr5 32963217 32963433 -166666717 - MIR SINE MIR -13 249 32 1874 146 56 21 chr5 32965215 32965592 -166664558 - MLT1B LTR MaLR 0 390 1 416 271 28 0 chr5 32966477 32966584 -166663566 + MIR SINE MIR 149 258 -4 422 221 62 72 chr5 32966610 32966805 -166663345 + MLT1L LTR MaLR 418 610 -5 1689 165 4 18 chr5 32967004 32967276 -166662874 + AluJb SINE Alu 15 282 -30 482 326 46 5 chr5 32967322 32967518 -166662632 + MIR SINE MIR 1 204 -58 2692 126 16 23 chr5 32968245 32968688 -166661462 + L1PA15 LINE L1 5717 6156 -9 212 371 95 0 chr5 32968894 32968999 -166661151 - L2 LINE L2 -11 3261 3147 21 57 0 0 chr5 32968999 32969034 -166661116 + AT_rich Low_complexity Low_complexity 1 35 0 738 164 0 0 chr5 32969223 32969339 -166660811 + FLAM_C SINE Alu 1 116 -27 372 263 26 0 chr5 32969769 32969883 -166660267 - MIR3 SINE MIR -7 201 85 428 270 18 84 chr5 32970766 32970992 -166659158 + LTR33A LTR ERVL 308 518 -5 2121 103 7 14 chr5 32971020 32971310 -166658840 + AluSx SINE Alu 18 305 -7 787 241 32 44 chr5 32974402 32974651 -166655499 - MER102b DNA MER1_type -1 340 95 7054 106 35 15 chr5 32975055 32975962 -166654188 - Tigger1 DNA MER2_type -5 2413 1477 2193 136 0 0 chr5 32975962 32976264 -166653886 - AluSg SINE Alu -8 302 1 7054 106 35 15 chr5 32976264 32976498 -166653652 - Tigger1 DNA MER2_type -941 1477 1249 737 224 0 0 chr5 32976499 32976633 -166653517 + FLAM_A SINE Alu 1 134 -8 2005 115 3 21 chr5 32976633 32976963 -166653187 - Tigger1 DNA MER2_type -1160 1258 935 2176 137 41 77 chr5 32976992 32977460 -166652690 - Tigger1 DNA MER2_type -1967 451 1 1806 161 3 18 chr5 32978329 32978638 -166651512 + AluJb SINE Alu 1 305 0 502 272 98 31 chr5 32979343 32979558 -166650592 - MIR SINE MIR -13 249 28 1830 161 15 66 chr5 32979741 32980151 -166649999 - MLT1B LTR MaLR -1 389 1 1867 183 25 6 chr5 32980360 32980715 -166649435 + MLT1A1 LTR MaLR 4 365 0 930 264 21 12 chr5 32980976 32981218 -166648932 + MIR SINE MIR 2 245 -17 833 338 70 34 chr5 32981325 32981881 -166648269 - MLT1K LTR MaLR -12 576 1 253 313 65 25 chr5 32983935 32984136 -166646014 - MLT1K LTR MaLR -13 575 367 723 176 38 124 chr5 32984593 32984644 -166645506 - MIR SINE MIR -30 232 178 2045 156 0 0 chr5 32984644 32984945 -166645205 - AluSx SINE Alu -11 301 1 723 176 38 124 chr5 32984945 32984993 -166645157 - MIR SINE MIR -84 178 127 2164 119 0 3 chr5 32984993 32985288 -166644862 + AluSg SINE Alu 1 294 -16 723 176 38 124 chr5 32985288 32985397 -166644753 - MIR SINE MIR -135 127 41 309 51 0 0 chr5 32985723 32985762 -166644388 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1106 87 29 52 chr5 32985865 32986037 -166644113 - L1PA11 LINE L1 -6 6168 6001 1306 229 59 31 chr5 32986245 32986634 -166643516 + MLT1C LTR MaLR 63 462 -5 433 247 183 8 chr5 32986653 32986904 -166643246 + LTR50 LTR ERVL 18 312 -483 252 299 36 98 chr5 32987145 32987212 -166642938 + MIR SINE MIR 67 137 -125 1524 151 110 11 chr5 32987212 32987484 -166642666 - AluJo SINE Alu -9 303 5 252 299 36 98 chr5 32987484 32987610 -166642540 + MIR SINE MIR 137 248 -14 207 139 28 0 chr5 32988879 32988915 -166641235 + L2 LINE L2 2765 2801 -513 204 370 43 0 chr5 32989421 32989513 -166640637 + MIR SINE MIR 46 141 -121 396 289 31 25 chr5 32990388 32990547 -166639603 - L1ME LINE L1 -447 5723 5564 1919 192 70 36 chr5 32990549 32990924 -166639226 - MSTB2 LTR MaLR 0 457 96 2184 89 98 9 chr5 32990924 32991250 -166638900 + THE1A LTR MaLR 1 355 0 12000 91 1 6 chr5 32991250 32992837 -166637313 + THE1A-int LTR MaLR 1 1580 0 2717 82 6 0 chr5 32992837 32993190 -166636960 + THE1A LTR MaLR 1 355 0 1919 192 70 36 chr5 32993190 32993254 -166636896 - MSTB2 LTR MaLR -360 97 1 316 242 110 0 chr5 32993254 32993345 -166636805 - L1ME LINE L1 -604 5566 5466 22 80 0 0 chr5 32993407 32993457 -166636693 + AT_rich Low_complexity Low_complexity 1 50 0 1636 171 87 106 chr5 32993588 32994041 -166636109 + MLT2B1 LTR ERVL 1 444 -76 204 97 0 0 chr5 32994041 32994072 -166636078 + (CA)n Simple_repeat Simple_repeat 2 32 0 1636 171 87 106 chr5 32994072 32994146 -166636004 + MLT2B1 LTR ERVL 444 518 -2 872 125 0 0 chr5 32994289 32994425 -166635725 - L1PA15 LINE L1 -6 6159 6024 567 308 11 11 chr5 32994533 32994715 -166635435 + MIR SINE MIR 48 229 -33 35 71 0 0 chr5 32995827 32995897 -166634253 + AT_rich Low_complexity Low_complexity 1 70 0 4343 135 59 12 chr5 32996055 32996805 -166633345 - LTR1 LTR ERV1 0 785 1 629 245 86 0 chr5 32997012 32997163 -166632987 - FRAM SINE Alu -2 164 1 316 307 6 39 chr5 32997164 32997343 -166632807 - L1ME3A LINE L1 -299 5871 5699 483 265 48 0 chr5 32997441 32997607 -166632543 - MER63C DNA MER1_type -1 929 756 292 80 20 0 chr5 32997715 32997765 -166632385 - MER63C DNA MER1_type -420 510 460 2074 109 0 7 chr5 32997765 32998087 -166632063 + AluSx SINE Alu 1 320 0 436 195 195 0 chr5 32998087 32998174 -166631976 + AluSc SINE Alu 133 236 -73 1017 198 9 18 chr5 32998212 32998434 -166631716 - MER63C DNA MER1_type -458 472 253 741 223 6 0 chr5 32998746 32998903 -166631247 + MIR SINE MIR 104 261 -1 211 246 85 51 chr5 32998829 32998947 -166631203 - MIR SINE MIR 0 262 141 * 678 82 0 0 chr5 32999284 32999381 -166630769 + L1P LINE L1 4127 4223 -1923 270 30 0 0 chr5 32999392 32999425 -166630725 + L1P LINE L1 4211 4243 -1903 2342 93 3 3 chr5 32999539 32999849 -166630301 + AluSg SINE Alu 1 310 0 412 343 23 12 chr5 33000212 33000384 -166629766 + MIR SINE MIR 12 185 -77 21 36 0 0 chr5 33000610 33000638 -166629512 + AT_rich Low_complexity Low_complexity 1 28 0 302 266 117 11 chr5 33001957 33002051 -166628099 - L2 LINE L2 -50 3263 3160 2127 119 33 3 chr5 33002063 33002365 -166627785 + AluSx SINE Alu 1 311 -1 685 347 89 55 chr5 33002521 33003236 -166626914 - L2 LINE L2 -420 2894 2155 1051 193 152 12 chr5 33004052 33004296 -166625854 + AluJo SINE Alu 4 281 -31 183 80 0 0 chr5 33004301 33004326 -166625824 + (TAA)n Simple_repeat Simple_repeat 2 26 0 531 276 79 35 chr5 33004745 33004973 -166625177 - L2 LINE L2 -2 3311 3074 * 3634 252 200 14 chr5 33004948 33006335 -166623815 - L2 LINE L2 -350 2964 1321 370 314 79 63 chr5 33006624 33006939 -166623211 - L2 LINE L2 -5 3308 2989 1433 47 0 0 chr5 33007022 33007193 -166622957 - AluYb8 SINE Alu -12 306 136 474 241 91 37 chr5 33007193 33007380 -166622770 - MIR SINE MIR -53 209 13 617 262 57 61 chr5 33007401 33007630 -166622520 + MIR SINE MIR 3 230 -32 762 210 99 12 chr5 33007639 33007882 -166622268 - MER33 DNA MER1_type 0 324 61 183 42 0 0 chr5 33008563 33008587 -166621563 + (T)n Simple_repeat Simple_repeat 1 24 0 266 236 313 14 chr5 33008723 33008867 -166621283 - MIR SINE MIR -56 206 20 999 282 129 59 chr5 33009004 33009494 -166620656 + L2 LINE L2 1563 2086 -1228 209 274 170 9 chr5 33010078 33010184 -166619966 - L2 LINE L2 -225 3047 2925 185 283 133 0 chr5 33010561 33010621 -166619529 + L3 LINE CR1 1380 1447 -130 201 278 0 0 chr5 33010742 33010796 -166619354 - L2 LINE L2 -92 3221 3168 321 287 32 0 chr5 33011553 33011647 -166618503 + MLT1K LTR MaLR 175 271 -317 1161 162 117 104 chr5 33011670 33012068 -166618082 + MLT1A2 LTR MaLR 1 374 0 259 236 45 22 chr5 33012142 33012231 -166617919 + MLT1K LTR MaLR 411 501 -87 2221 130 0 0 chr5 33012293 33012600 -166617550 - AluSx SINE Alu -5 307 1 592 311 135 27 chr5 33013443 33013739 -166616411 - L2 LINE L2 -1228 2086 1759 499 293 24 37 chr5 33014096 33014260 -166615890 + MIR SINE MIR 5 166 -96 345 326 154 39 chr5 33014335 33014568 -166615582 + L2 LINE L2 3012 3271 -1 616 289 6 0 chr5 33016345 33016518 -166613632 + MER5B DNA MER1_type 1 174 -4 304 262 215 20 chr5 33016581 33016730 -166613420 - MER5B DNA MER1_type 0 178 1 720 151 87 0 chr5 33016902 33017074 -166613076 - MER53 DNA DNA 0 189 3 438 20 0 0 chr5 33018807 33018858 -166611292 + (CA)n Simple_repeat Simple_repeat 2 52 0 425 286 50 50 chr5 33019473 33019564 -166610586 - MIR3 SINE MIR -10 198 105 2182 131 3 0 chr5 33019564 33019870 -166610280 - AluSx SINE Alu -5 307 1 425 286 50 50 chr5 33019870 33019918 -166610232 - MIR3 SINE MIR -102 106 59 209 196 18 0 chr5 33021048 33021104 -166609046 + CT-rich Low_complexity Low_complexity 2 58 0 279 54 0 0 chr5 33021513 33021550 -166608600 + (CA)n Simple_repeat Simple_repeat 1 37 0 502 280 140 10 chr5 33022500 33022707 -166607443 + MIR SINE MIR 29 262 0 553 248 25 10 chr5 33022837 33023039 -166607111 - L1MC5 LINE L1 -37 7924 7720 592 235 75 5 chr5 33023041 33023228 -166606922 + MLT1H LTR MaLR 1 200 -349 228 327 159 9 chr5 33023241 33023354 -166606796 + MLT1H LTR MaLR 420 549 0 330 26 0 0 chr5 33023706 33023745 -166606405 + (CA)n Simple_repeat Simple_repeat 2 40 0 387 0 0 0 chr5 33023781 33023824 -166606326 + (GA)n Simple_repeat Simple_repeat 1 43 0 1679 135 19 61 chr5 33023886 33024198 -166605952 + AluJo SINE Alu 3 301 -11 486 145 14 29 chr5 33024204 33024342 -166605808 + GA-rich Low_complexity Low_complexity 1 136 0 2018 139 0 10 chr5 33025077 33025410 -166604740 - AluJb SINE Alu 0 312 1 666 214 19 0 chr5 33025632 33025786 -166604364 - MER103 DNA DNA -2 164 8 435 326 7 17 chr5 33025863 33026022 -166604128 - MIR3 SINE MIR -48 160 7 21 0 0 0 chr5 33026354 33026375 -166603775 + AT_rich Low_complexity Low_complexity 1 21 0 508 319 122 40 chr5 33026481 33026982 -166603168 + MLT1L LTR MaLR 1 542 -73 549 368 95 6 chr5 33028105 33028420 -166601730 + L3 LINE CR1 1046 1388 -189 1622 199 21 18 chr5 33028454 33028790 -166601360 + MER1B DNA MER1_type 1 337 0 267 293 195 35 chr5 33028799 33028973 -166601177 + L3 LINE CR1 1361 1562 -15 313 194 0 42 chr5 33029116 33029188 -166600962 + L2 LINE L2 3243 3311 -2 183 129 0 0 chr5 33029550 33029581 -166600569 + (TTCC)n Simple_repeat Simple_repeat 3 33 0 5265 77 8 4 chr5 33029603 33030318 -166599832 - L1PA10 LINE L1 -1 6167 5450 234 192 0 0 chr5 33030318 33030370 -166599780 + CT-rich Low_complexity Low_complexity 2 53 0 1299 142 82 113 chr5 33030652 33031032 -166599118 + L1MA4A LINE L1 5932 6299 -4 209 253 211 11 chr5 33031242 33031337 -166598813 - MIR SINE MIR -120 142 29 329 288 50 43 chr5 33031351 33031490 -166598660 + MIR SINE MIR 104 243 -19 22 35 0 0 chr5 33032684 33032713 -166597437 + AT_rich Low_complexity Low_complexity 1 29 0 868 41 0 72 chr5 33032779 33032973 -166597177 + (TA)n Simple_repeat Simple_repeat 1 180 0 317 239 68 0 chr5 33034074 33034162 -166595988 + L1MA10 LINE L1 6241 6334 0 366 23 0 0 chr5 33035605 33035648 -166594502 + (TG)n Simple_repeat Simple_repeat 2 44 0 285 183 0 0 chr5 33035648 33035708 -166594442 + (TA)n Simple_repeat Simple_repeat 2 61 0 205 293 40 40 chr5 33038021 33038096 -166592054 + L3b LINE CR1 1393 1467 -116 2357 98 10 0 chr5 33038962 33039259 -166590891 - AluSx SINE Alu -12 300 1 1236 155 10 0 chr5 33039396 33039603 -166590547 + MER2 DNA MER2_type 2 210 -135 515 254 65 0 chr5 33041886 33042024 -166588126 - MIR SINE MIR -13 249 103 231 292 0 0 chr5 33042071 33042136 -166588014 - L1 LINE L1 -1329 4817 4753 199 385 55 0 chr5 33042141 33042232 -166587918 - MIR SINE MIR -165 97 2 1056 233 126 82 chr5 33043211 33043880 -166586270 + HAL1 LINE L1 8 705 -1802 277 232 50 61 chr5 33044023 33044122 -166586028 + MIR SINE MIR 92 189 -73 315 339 42 0 chr5 33044125 33044243 -166585907 - MIR SINE MIR -23 239 117 33 0 0 0 chr5 33044756 33044789 -166585361 + AT_rich Low_complexity Low_complexity 1 33 0 15805 75 8 1 chr5 33044791 33047245 -166582905 - L1PA7 LINE L1 -5 6149 3673 261 0 0 0 chr5 33047245 33047274 -166582876 + (TG)n Simple_repeat Simple_repeat 2 30 0 15805 75 8 1 chr5 33047274 33047710 -166582440 - L1PA7 LINE L1 -2481 3673 3242 187 242 0 0 chr5 33048518 33048551 -166581599 - L2 LINE L2 -21 3251 3219 742 166 0 43 chr5 33048777 33048916 -166581234 - FLAM_C SINE Alu 0 133 1 2272 97 3 3 chr5 33049074 33049385 -166580765 - AluSq SINE Alu -2 311 1 1362 199 3 43 chr5 33049386 33049445 -166580705 - AluJo SINE Alu -11 301 241 1680 186 24 12 chr5 33049445 33049784 -166580366 + MER61A LTR ERV1 1 343 0 1362 199 3 43 chr5 33049784 33050025 -166580125 - AluJo SINE Alu -71 241 13 2291 122 0 0 chr5 33050644 33050955 -166579195 - AluSq SINE Alu -2 311 1 256 349 0 0 chr5 33051655 33051718 -166578432 - L2 LINE L2 -24 3289 3227 27 29 0 0 chr5 33051922 33051956 -166578194 + AT_rich Low_complexity Low_complexity 1 34 0 468 232 66 31 chr5 33052304 33052487 -166577663 - L1ME2 LINE L1 -1 6163 5971 461 307 121 54 chr5 33052680 33053466 -166576684 - L2 LINE L2 -198 3074 2238 317 234 0 0 chr5 33053466 33053530 -166576620 + L1MC4 LINE L1 6640 6703 -1339 202 285 60 45 chr5 33053618 33053714 -166576436 - MER5B DNA MER1_type -78 100 7 1886 135 35 35 chr5 33053869 33054180 -166575970 - AluSx SINE Alu 0 312 2 241 175 53 0 chr5 33054613 33054670 -166575480 - LTR66 LTR ERVL -153 457 398 302 116 53 21 chr5 33054670 33054765 -166575385 + (TA)n Simple_repeat Simple_repeat 2 99 0 190 250 30 15 chr5 33055038 33055170 -166574980 + GA-rich Low_complexity Low_complexity 2 135 0 213 364 0 0 chr5 33055612 33055678 -166574472 - MIR3 SINE MIR -36 172 107 1342 118 55 9 chr5 33055702 33055922 -166574228 + MER30 DNA MER1_type 1 230 0 2197 82 0 7 chr5 33056231 33056538 -166573612 - AluSc SINE Alu 0 305 1 189 397 43 26 chr5 33056584 33056700 -166573450 - L2 LINE L2 -17 3255 3138 215 309 55 88 chr5 33056875 33057092 -166573058 + MIR SINE MIR 46 255 -7 * 933 213 62 62 chr5 33057050 33057290 -166572860 - MIR SINE MIR 0 262 23 21 57 0 0 chr5 33057547 33057582 -166572568 + AT_rich Low_complexity Low_complexity 1 35 0 320 197 142 126 chr5 33058151 33058334 -166571816 - L1MC4 LINE L1 0 8042 7857 1009 272 39 27 chr5 33058370 33058708 -166571442 + LTR16A LTR ERVL 31 372 -78 26 64 0 0 chr5 33058758 33058805 -166571345 + AT_rich Low_complexity Low_complexity 1 47 0 963 220 75 20 chr5 33058805 33059002 -166571148 - L1MC4 LINE L1 -249 7793 7573 216 0 0 0 chr5 33059002 33059026 -166571124 + (CTTTG)n Simple_repeat Simple_repeat 2 25 0 963 220 75 20 chr5 33059026 33059123 -166571027 - L1MC4 LINE L1 -469 7573 7483 230 301 0 14 chr5 33059499 33059572 -166570578 - HsTC2 DNA Tc2 -1816 82 11 636 299 16 16 chr5 33059575 33059759 -166570391 - MIR SINE MIR -31 231 48 2019 124 26 100 chr5 33060544 33060964 -166569186 + MLT1B LTR MaLR 1 389 -1 795 250 88 37 chr5 33061959 33062231 -166567919 + L2 LINE L2 3028 3313 0 475 261 33 56 chr5 33062229 33062409 -166567741 - L2 LINE L2 -4 3309 3134 * 25 0 0 0 chr5 33063796 33063821 -166566329 + AT_rich Low_complexity Low_complexity 1 25 0 354 326 29 22 chr5 33064989 33065127 -166565023 - L2 LINE L2 0 3313 3175 1080 116 9 111 chr5 33065154 33065183 -166564967 - THE1B LTR MaLR 0 364 334 7178 35 1 33 chr5 33065183 33066335 -166563815 + L1PA4 LINE L1 5031 6152 -3 1080 116 9 111 chr5 33066335 33066521 -166563629 - THE1B LTR MaLR -30 334 171 225 0 0 0 chr5 33066617 33066642 -166563508 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 959 332 62 28 chr5 33066713 33067315 -166562835 - L2 LINE L2 -516 2798 2177 743 313 60 17 chr5 33067401 33068116 -166562034 + L1MEc LINE L1 1075 1820 -4576 788 167 0 0 chr5 33068326 33068452 -166561698 - FLAM_C SINE Alu -3 130 5 766 256 76 16 chr5 33068625 33069072 -166561078 + L1MEc LINE L1 2178 2612 -3603 546 143 9 38 chr5 33069096 33069201 -166560949 + MSTC LTR MaLR 1 102 -326 713 301 152 17 chr5 33069214 33069616 -166560534 + LTR33 LTR ERVL 14 469 -52 284 308 0 0 chr5 33069668 33069775 -166560375 + L1MEc LINE L1 3282 3388 -2827 329 285 40 46 chr5 33069779 33069930 -166560220 + L1MEc LINE L1 3801 3950 -2265 746 125 8 8 chr5 33070072 33070192 -166559958 - AluSg/x SINE Alu -1 309 190 1450 96 0 11 chr5 33070192 33070380 -166559770 + AluSx SINE Alu 22 207 -105 921 114 0 0 chr5 33071858 33071990 -166558160 + AluSc SINE Alu 170 301 -8 214 235 49 62 chr5 33072460 33072541 -166557609 - L2 LINE L2 0 3313 3234 371 328 76 0 chr5 33072648 33072779 -166557371 + MIR3 SINE MIR 5 145 -63 263 300 127 64 chr5 33072932 33073152 -166556998 + L2 LINE L2 2953 3186 -86 25 75 0 0 chr5 33074984 33075037 -166555113 + AT_rich Low_complexity Low_complexity 1 53 0 481 171 38 9 chr5 33075038 33075143 -166555007 + L1MD3 LINE L1 7873 7980 -15 2126 83 7 4 chr5 33075538 33075814 -166554336 + AluSq SINE Alu 21 297 -16 604 73 85 0 chr5 33075925 33076089 -166554061 + (TA)n Simple_repeat Simple_repeat 1 178 0 315 243 81 62 chr5 33076305 33076515 -166553635 - LTR33 LTR ERVL -6 515 302 257 270 40 61 chr5 33076597 33076745 -166553405 - LTR33 LTR ERVL -376 145 1 6929 137 45 6 chr5 33076996 33078181 -166551969 - Tigger3b DNA MER2_type 0 1231 1 383 350 49 16 chr5 33080557 33080740 -166549410 + MIR SINE MIR 19 207 -55 613 108 0 43 chr5 33080766 33080859 -166549291 - 5S rRNA rRNA -32 89 1 1436 33 22 0 chr5 33081379 33081561 -166548589 - L1P LINE L1 -3171 2975 2790 9720 27 5 0 chr5 33081561 33083481 -166546669 + L1PA3 LINE L1 4233 6155 0 32 26 0 0 chr5 33083847 33083886 -166546264 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr5 33085333 33085354 -166544796 + AT_rich Low_complexity Low_complexity 1 21 0 710 274 111 0 chr5 33085476 33085684 -166544466 + Charlie2 DNA MER1_type 92 322 -2540 2387 206 70 65 chr5 33085689 33086578 -166543572 + Charlie2 DNA MER1_type 1856 2752 -110 2131 124 0 0 chr5 33086578 33086884 -166543266 - AluSc SINE Alu -1 308 3 2387 206 70 65 chr5 33086884 33086987 -166543163 + Charlie2 DNA MER1_type 2752 2853 -9 275 234 87 85 chr5 33087288 33087483 -166542667 + MIR SINE MIR 2 191 -67 368 238 0 48 chr5 33088109 33088214 -166541936 - L2 LINE L2 -69 3244 3145 591 318 76 38 chr5 33088257 33088376 -166541774 - L2 LINE L2 -338 2976 2863 1388 190 129 41 chr5 33088376 33088607 -166541543 + MSTD LTR MaLR 1 277 -119 2246 101 0 0 chr5 33088607 33088895 -166541255 + AluSg SINE Alu 9 296 -14 1388 190 129 41 chr5 33088895 33089027 -166541123 + MSTD LTR MaLR 277 396 0 591 318 76 38 chr5 33089027 33089196 -166540954 - L2 LINE L2 -451 2863 2677 206 192 19 0 chr5 33091175 33091227 -166538923 + (TA)n Simple_repeat Simple_repeat 1 53 0 399 282 196 55 chr5 33091228 33091632 -166538518 - L1MC4a LINE L1 -1372 6436 5976 1031 172 104 5 chr5 33091651 33091872 -166538278 - L1MD3 LINE L1 -23 7972 7730 567 258 20 24 chr5 33091876 33092124 -166538026 - L1MC4a LINE L1 -1830 5978 5732 1977 198 33 0 chr5 33092339 33092758 -166537392 - Charlie4a DNA MER1_type -75 433 1 231 36 0 0 chr5 33092871 33092899 -166537251 + (TC)n Simple_repeat Simple_repeat 1 28 0 272 168 84 11 chr5 33092899 33092994 -166537156 + (CATATA)n Simple_repeat Simple_repeat 1 102 0 254 284 27 2 chr5 33093037 33093112 -166537038 - MIR SINE MIR -95 113 34 1041 238 110 74 chr5 33094404 33094930 -166535220 + MLT1H LTR MaLR 1 545 -4 8955 212 64 33 chr5 33095831 33098156 -166531994 + L1MDa LINE L1 1 2397 -4143 1985 188 65 7 chr5 33098134 33098275 -166531875 + L1MD1 LINE L1 6174 6305 -331 * 279 0 0 0 chr5 33098275 33098306 -166531844 + (TG)n Simple_repeat Simple_repeat 2 32 0 1985 188 65 7 chr5 33098306 33098578 -166531572 + L1MD1 LINE L1 6305 6611 -25 32 26 0 0 chr5 33098578 33098617 -166531533 + AT_rich Low_complexity Low_complexity 1 39 0 206 259 0 37 chr5 33099714 33099768 -166530382 - MER5B DNA MER1_type -1 177 126 645 294 0 11 chr5 33099768 33099948 -166530202 + MIR SINE MIR 82 259 -3 4795 127 43 17 chr5 33100032 33100644 -166529506 + LTR39 LTR ERV1 1 638 -145 1514 67 91 207 chr5 33100644 33101094 -166529056 - MER48 LTR ERV1 0 398 1 4795 127 43 17 chr5 33101094 33101244 -166528906 + LTR39 LTR ERV1 638 783 0 22 0 0 0 chr5 33101337 33101359 -166528791 + AT_rich Low_complexity Low_complexity 1 22 0 278 250 16 0 chr5 33102517 33102581 -166527569 + MIR3 SINE MIR 92 156 -52 290 300 119 0 chr5 33103142 33103267 -166526883 - MIR SINE MIR -69 139 12 2076 141 3 3 chr5 33104068 33104380 -166525770 - AluSx SINE Alu 0 312 1 198 0 0 0 chr5 33104388 33104410 -166525740 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1690 176 24 14 chr5 33104530 33104826 -166525324 + AluJb SINE Alu 1 299 -13 980 283 80 6 chr5 33105130 33105455 -166524695 - MLT1G1 LTR MaLR -186 371 67 241 286 80 9 chr5 33105470 33105582 -166524568 - L1ME LINE L1 -480 5641 5522 550 299 112 8 chr5 33105583 33105952 -166524198 - L2 LINE L2 -33 3280 2803 1158 284 123 22 chr5 33107404 33107866 -166522284 + L3 LINE CR1 625 1133 -444 612 245 80 6 chr5 33107884 33108047 -166522103 + MER5B DNA MER1_type 1 175 -3 2325 101 3 0 chr5 33108069 33108376 -166521774 - AluSp SINE Alu -5 308 1 375 322 62 62 chr5 33108428 33108813 -166521337 + L2 LINE L2 2564 2948 -366 298 344 209 0 chr5 33109178 33109422 -166520728 + L3 LINE CR1 1272 1566 -11 231 313 0 0 chr5 33110499 33110563 -166519587 + L2 LINE L2 3209 3272 0 1877 145 10 17 chr5 33110745 33111042 -166519108 + AluSx SINE Alu 1 295 -17 204 182 0 0 chr5 33112490 33112534 -166517616 + (TA)n Simple_repeat Simple_repeat 2 45 0 455 293 144 10 chr5 33112893 33113101 -166517049 - LTR33 LTR ERVL -285 236 1 292 337 0 10 chr5 33113113 33113211 -166516939 + MIR SINE MIR 160 256 -6 204 305 42 32 chr5 33113225 33113320 -166516830 + MIR3 SINE MIR 109 204 -4 2434 68 0 0 chr5 33113800 33114095 -166516055 - AluY SINE Alu -16 295 1 599 251 115 21 chr5 33114312 33114555 -166515595 + L2 LINE L2 2971 3236 -77 705 328 72 25 chr5 33114668 33115183 -166514967 - MARNA DNA Mariner -18 568 30 680 206 74 37 chr5 33115867 33115942 -166514208 + MLT1D LTR MaLR 1 72 -433 617 257 44 113 chr5 33115942 33116374 -166513776 + MER93a LTR ERV1 1 402 0 680 206 74 37 chr5 33116374 33116487 -166513663 + MLT1D LTR MaLR 72 196 -309 1866 159 83 3 chr5 33116514 33117088 -166513062 - L1M4 LINE L1 -510 5674 4963 * 1988 227 117 30 chr5 33117086 33117971 -166512179 + L1MD2 LINE L1 5184 6192 -27 238 378 142 0 chr5 33118681 33118808 -166511342 - MIR3 SINE MIR -28 180 36 1009 186 6 0 chr5 33118820 33118997 -166511153 + MER45A DNA AcHobo 1 178 0 263 344 42 0 chr5 33119671 33119767 -166510383 + MIR SINE MIR 53 152 -110 226 189 0 0 chr5 33119887 33119924 -166510226 + THE1C LTR MaLR 1 37 -338 1149 266 30 76 chr5 33120032 33120727 -166509423 + L1ME3A LINE L1 5281 5943 -227 234 277 69 79 chr5 33121212 33121414 -166508736 + L1ME3A LINE L1 5968 6167 -3 200 158 26 0 chr5 33121421 33121459 -166508691 - MIR SINE MIR -127 135 97 193 200 25 0 chr5 33122207 33122247 -166507903 - L2 LINE L2 -2 3311 3271 517 279 248 12 chr5 33123085 33123539 -166506611 + L2 LINE L2 2621 3179 -134 236 158 53 0 chr5 33123540 33123616 -166506534 + (TA)n Simple_repeat Simple_repeat 1 80 0 562 250 25 25 chr5 33123617 33123777 -166506373 + L2 LINE L2 3154 3313 0 2024 136 0 10 chr5 33124923 33125256 -166504894 - AluJb SINE Alu 0 312 1 710 214 19 0 chr5 33125478 33125632 -166504518 - MER103 DNA DNA -2 164 8 431 326 7 17 chr5 33125709 33125868 -166504282 - MIR3 SINE MIR -48 160 7 21 0 0 0 chr5 33126199 33126220 -166503930 + AT_rich Low_complexity Low_complexity 1 21 0 662 319 122 40 chr5 33126326 33126827 -166503323 + MLT1L LTR MaLR 1 542 -73 550 368 95 6 chr5 33127949 33128264 -166501886 + L3 LINE CR1 1046 1388 -189 1608 199 21 18 chr5 33128298 33128634 -166501516 + MER1B DNA MER1_type 1 337 0 265 293 195 35 chr5 33128643 33128817 -166501333 + L3 LINE CR1 1361 1562 -15 308 194 0 42 chr5 33128960 33129032 -166501118 + L2 LINE L2 3243 3311 -2 183 129 0 0 chr5 33129394 33129425 -166500725 + (TTCC)n Simple_repeat Simple_repeat 3 33 0 5265 77 8 4 chr5 33129447 33130162 -166499988 - L1PA10 LINE L1 -1 6167 5450 234 192 0 0 chr5 33130162 33130214 -166499936 + CT-rich Low_complexity Low_complexity 2 53 0 1405 146 81 112 chr5 33130492 33130876 -166499274 + L1MA4A LINE L1 5928 6299 -4 210 253 211 11 chr5 33131086 33131181 -166498969 - MIR SINE MIR -120 142 29 337 288 50 43 chr5 33131195 33131334 -166498816 + MIR SINE MIR 104 243 -19 22 35 0 0 chr5 33132528 33132557 -166497593 + AT_rich Low_complexity Low_complexity 1 29 0 839 56 62 0 chr5 33132617 33132777 -166497373 + (TA)n Simple_repeat Simple_repeat 1 170 0 341 239 68 0 chr5 33133878 33133966 -166496184 + L1MA10 LINE L1 6241 6334 0 366 23 0 0 chr5 33135409 33135452 -166494698 + (TG)n Simple_repeat Simple_repeat 2 44 0 303 177 0 0 chr5 33135452 33135514 -166494636 + (TA)n Simple_repeat Simple_repeat 2 63 0 206 293 40 40 chr5 33137827 33137902 -166492248 + L3b LINE CR1 1393 1467 -116 2331 98 10 0 chr5 33138768 33139065 -166491085 - AluSx SINE Alu -12 300 1 1300 202 81 17 chr5 33139202 33139499 -166490651 + MER2 DNA MER2_type 2 317 -28 525 246 65 0 chr5 33141691 33141829 -166488321 - MIR SINE MIR -13 249 103 231 292 0 0 chr5 33141876 33141941 -166488209 - L1 LINE L1 -1329 4817 4753 199 385 55 0 chr5 33141946 33142037 -166488113 - MIR SINE MIR -165 97 2 937 229 100 92 chr5 33143016 33143685 -166486465 + HAL1 LINE L1 8 705 -1802 281 232 50 61 chr5 33143828 33143927 -166486223 + MIR SINE MIR 92 189 -73 316 339 42 0 chr5 33143930 33144048 -166486102 - MIR SINE MIR -23 239 117 33 0 0 0 chr5 33144561 33144594 -166485556 + AT_rich Low_complexity Low_complexity 1 33 0 4893 42 2 0 chr5 33144596 33145191 -166484959 - L1PA7 LINE L1 -5 6149 5554 10110 88 0 2 chr5 33145191 33146654 -166483496 + L1P LINE L1 3173 4632 -1514 308 264 253 28 chr5 33147724 33147803 -166482347 - MIR SINE MIR -19 243 183 459 52 0 0 chr5 33147803 33147861 -166482289 + (TAG)n Simple_repeat Simple_repeat 1 58 0 308 264 253 28 chr5 33147861 33147963 -166482187 - MIR SINE MIR -79 183 21 825 300 138 59 chr5 33148169 33148373 -166481777 - L3 LINE CR1 -124 1453 1267 2290 97 7 0 chr5 33148373 33148671 -166481479 - AluSg SINE Alu -10 300 1 825 300 138 59 chr5 33148671 33149109 -166481041 - L3 LINE CR1 -310 1267 760 312 299 31 31 chr5 33149117 33149214 -166480936 + L1PA13 LINE L1 203 299 -6488 4856 179 44 8 chr5 33149216 33150925 -166479225 + L1PA16 LINE L1 4377 6150 -16 37816 80 5 2 chr5 33151071 33157204 -166472946 - L1PA6 LINE L1 0 6154 1 703 265 5 34 chr5 33157270 33157474 -166472676 + MLT1I LTR MaLR 195 392 -17 375 23 0 0 chr5 33157669 33157713 -166472437 + (CA)n Simple_repeat Simple_repeat 2 45 0 2887 13 0 0 chr5 33158375 33158693 -166471457 - AluYb8 SINE Alu 0 318 1 22 35 0 0 chr5 33159312 33159341 -166470809 + AT_rich Low_complexity Low_complexity 1 29 0 231 167 0 0 chr5 33159413 33159455 -166470695 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1650 109 0 18 chr5 33159480 33159709 -166470441 + AluSq SINE Alu 86 310 -3 1500 207 0 14 chr5 33159709 33159989 -166470161 - AluJb SINE Alu -36 276 1 25 31 0 0 chr5 33160028 33160060 -166470090 + AT_rich Low_complexity Low_complexity 1 32 0 696 236 14 88 chr5 33160813 33160938 -166469212 + L1MC5 LINE L1 7479 7612 -349 863 224 0 0 chr5 33160938 33161090 -166469060 + FRAM SINE Alu 1 152 -14 696 236 14 88 chr5 33161090 33161384 -166468766 + L1MC5 LINE L1 7612 7867 -94 690 245 14 98 chr5 33161787 33161853 -166468297 - MIR SINE MIR 0 262 192 2048 137 51 20 chr5 33161853 33162203 -166467947 - THE1B LTR MaLR -3 361 1 11409 78 28 21 chr5 33162203 33162298 -166467852 - THE1B-int LTR MaLR 0 1580 1487 2246 122 0 7 chr5 33162298 33162602 -166467548 + AluSx SINE Alu 1 302 -10 11409 78 28 21 chr5 33162602 33164075 -166466075 - THE1B-int LTR MaLR -93 1487 1 1951 147 69 20 chr5 33164075 33164422 -166465728 - THE1B LTR MaLR 0 364 1 690 245 14 98 chr5 33164422 33164639 -166465511 - MIR SINE MIR -67 195 1 412 254 0 36 chr5 33165376 33165486 -166464664 + MIR SINE MIR 34 139 -69 541 163 135 0 chr5 33166321 33166462 -166463688 - MER53 DNA DNA -27 162 3 669 180 129 14 chr5 33166472 33166611 -166463539 - FRAM SINE Alu -11 155 1 186 43 0 0 chr5 33166724 33166747 -166463403 + (CA)n Simple_repeat Simple_repeat 1 23 0 256 229 145 37 chr5 33167842 33168056 -166462094 + L1MC5 LINE L1 7501 7737 -224 537 242 47 0 chr5 33168177 33168198 -166461952 + MIR SINE MIR 128 147 -115 2775 123 9 20 chr5 33168198 33168637 -166461513 + Tigger2a DNA MER2_type 1 434 0 537 242 47 0 chr5 33168637 33168743 -166461407 + MIR SINE MIR 147 261 -1 303 348 33 54 chr5 33168762 33168946 -166461204 - MIR3 SINE MIR -23 185 6 357 179 152 83 chr5 33169104 33169249 -166460901 + L1ME2 LINE L1 5928 6082 -82 13099 118 83 10 chr5 33169249 33169365 -166460785 - Tigger1 DNA MER2_type 0 2418 2312 2365 100 0 0 chr5 33169365 33169664 -166460486 + AluSp SINE Alu 2 300 -13 13099 118 83 10 chr5 33169664 33169756 -166460394 - Tigger1 DNA MER2_type -106 2312 2228 2253 104 3 3 chr5 33169756 33170053 -166460097 + AluSx SINE Alu 1 297 -15 13099 118 83 10 chr5 33170053 33172075 -166458075 - Tigger1 DNA MER2_type -190 2228 24 361 209 0 0 chr5 33172081 33172167 -166457983 + L1ME2 LINE L1 6079 6164 0 190 279 23 0 chr5 33172284 33172327 -166457823 - MIR SINE MIR -135 73 30 270 280 280 0 chr5 33173590 33173715 -166456435 - MIR SINE MIR -78 184 25 2316 108 0 0 chr5 33173898 33174195 -166455955 + AluSg SINE Alu 1 297 -13 1067 272 32 66 chr5 33174224 33174753 -166455397 + LTR33 LTR ERVL 11 521 0 298 309 136 75 chr5 33174821 33175197 -166454953 - L2 LINE L2 -3 3310 2912 2101 120 7 0 chr5 33175246 33175537 -166454613 - AluSq SINE Alu -20 293 1 1838 146 68 7 chr5 33175824 33176118 -166454032 + AluSx SINE Alu 1 312 0 498 255 92 9 chr5 33176253 33176427 -166453723 + MIR SINE MIR 19 202 -60 360 259 18 9 chr5 33176454 33176566 -166453584 - MLT1L LTR MaLR -29 586 474 321 275 110 18 chr5 33176776 33176885 -166453265 + L2 LINE L2 3190 3308 -5 355 264 152 22 chr5 33176944 33177122 -166453028 - MER58C DNA MER1_type -13 202 2 254 250 52 0 chr5 33177515 33177611 -166452539 + MER103 DNA DNA 11 111 -55 205 330 20 50 chr5 33178008 33178108 -166452042 - MIR SINE MIR -93 115 19 350 327 71 39 chr5 33178183 33178338 -166451812 + MIR SINE MIR 20 177 -76 2490 62 0 7 chr5 33178354 33178658 -166451492 + AluY SINE Alu 3 304 -7 422 296 15 22 chr5 33178754 33178889 -166451261 - MIR3 SINE MIR -64 144 11 993 273 61 30 chr5 33179478 33179814 -166450336 + MLT1I LTR MaLR 3 354 -55 3317 77 9 7 chr5 33179814 33180257 -166449893 - MLT2A1 LTR ERVL 0 444 1 993 273 61 30 chr5 33180257 33180315 -166449835 + MLT1I LTR MaLR 354 409 0 348 248 191 13 chr5 33180316 33180473 -166449677 + MIR SINE MIR 78 262 0 1887 130 0 0 chr5 33181106 33181368 -166448782 + AluSx SINE Alu 32 293 -19 231 235 20 0 chr5 33181768 33181819 -166448331 + L2 LINE L2 3008 3059 -213 2503 233 113 19 chr5 33183074 33184123 -166446027 - Charlie2a DNA MER1_type 0 2862 1715 1055 195 183 12 chr5 33184724 33184975 -166445175 - AluJo SINE Alu -8 294 1 249 33 0 0 chr5 33185032 33185062 -166445088 + (TG)n Simple_repeat Simple_repeat 2 31 0 1596 200 19 0 chr5 33185065 33185335 -166444815 - AluJo SINE Alu -37 275 1 287 216 125 34 chr5 33185354 33185442 -166444708 - L2 LINE L2 -4 3309 3214 1332 257 157 8 chr5 33185447 33185937 -166444213 - L2 LINE L2 -889 2425 1863 1817 212 37 0 chr5 33186058 33186440 -166443710 - MSTD LTR MaLR 0 396 1 1115 226 81 53 chr5 33186446 33186876 -166443274 + MER39 LTR ERV1 262 703 -4 1484 285 86 23 chr5 33186884 33187410 -166442740 - L2 LINE L2 -1458 1856 1298 1780 141 67 23 chr5 33187411 33187770 -166442380 - MSTA LTR MaLR 0 375 1 3833 179 32 6 chr5 33187770 33188483 -166441667 - MSTA-int LTR MaLR 0 1651 920 2581 152 9 0 chr5 33188483 33188925 -166441225 - MSTA-int LTR MaLR -1205 446 1 2568 107 54 10 chr5 33188925 33189335 -166440815 - MSTA LTR MaLR 0 428 1 462 354 29 17 chr5 33189336 33189511 -166440639 - L2 LINE L2 -2014 1300 1124 500 265 27 45 chr5 33189755 33189854 -166440296 + L1ME1 LINE L1 5942 6041 -125 2174 168 51 19 chr5 33189854 33190265 -166439885 - MSTB LTR MaLR 0 426 3 500 265 27 45 chr5 33190265 33190388 -166439762 + L1ME1 LINE L1 6041 6160 -6 525 71 0 0 chr5 33190445 33190515 -166439635 + (TA)n Simple_repeat Simple_repeat 1 70 0 2237 118 0 3 chr5 33190549 33190929 -166439221 + AluSg SINE Alu 4 382 0 451 228 31 39 chr5 33190969 33191096 -166439054 - Charlie2 DNA MER1_type -2442 340 215 847 92 171 6 chr5 33191112 33191276 -166438874 - L1MA5 LINE L1 -2 6298 6108 2024 160 3 3 chr5 33191276 33191589 -166438561 + AluSq SINE Alu 1 313 0 23613 86 6 6 chr5 33191590 33195276 -166434874 + L1PA6 LINE L1 6 3686 -2468 279 0 0 0 chr5 33195276 33195307 -166434843 + (CA)n Simple_repeat Simple_repeat 2 32 0 23613 86 6 6 chr5 33195307 33197771 -166432379 + L1PA6 LINE L1 3686 6148 -6 1416 130 40 0 chr5 33197781 33198034 -166432116 - L1MA5 LINE L1 -175 6125 5863 237 319 50 39 chr5 33198034 33198216 -166431934 - Charlie2 DNA MER1_type -2572 210 27 284 192 0 0 chr5 33198490 33198542 -166431608 - MER66A LTR ERV1 -140 338 287 216 362 0 64 chr5 33198895 33198989 -166431161 - MIR SINE MIR -76 132 45 2653 137 70 2 chr5 33198989 33199443 -166430707 - MER31A LTR ERV1 0 485 1 255 210 76 1 chr5 33201883 33202011 -166428139 + MLT1I LTR MaLR 1 142 -267 235 324 98 17 chr5 33202179 33202352 -166427798 + MLT1H LTR MaLR 347 533 -16 346 338 56 0 chr5 33202382 33202524 -166427626 + MIR SINE MIR 102 251 -11 318 26 0 0 chr5 33202569 33202608 -166427542 + (TG)n Simple_repeat Simple_repeat 1 39 0 198 0 0 0 chr5 33202607 33202629 -166427521 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 601 258 93 31 chr5 33203469 33203633 -166426517 + MIR SINE MIR 56 235 -27 1834 118 38 79 chr5 33203633 33204024 -166426126 + THE1C LTR MaLR 1 375 0 601 258 93 31 chr5 33204024 33204053 -166426097 + MIR SINE MIR 235 261 -1 28 61 0 0 chr5 33204054 33204103 -166426047 + AT_rich Low_complexity Low_complexity 1 49 0 2372 85 0 25 chr5 33205297 33205616 -166424534 - AluY SINE Alu 0 311 1 1050 238 5 14 chr5 33206232 33206455 -166423695 + MER58A DNA MER1_type 4 224 0 228 214 29 97 chr5 33206463 33206566 -166423584 + HAL1 LINE L1 2058 2153 -354 434 175 0 0 chr5 33206994 33207074 -166423076 + MLT1A1 LTR MaLR 1 80 -285 6505 68 8 2 chr5 33207074 33208168 -166421982 + L1PA8A LINE L1 5026 6124 -7 531 69 0 0 chr5 33208173 33208245 -166421905 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 1129 167 6 130 chr5 33208245 33208568 -166421582 + MLT1A1 LTR MaLR 83 365 0 238 235 0 0 chr5 33208647 33208698 -166421452 - MER5A DNA MER1_type -138 51 1 189 341 123 43 chr5 33208826 33208964 -166421186 + MIR SINE MIR 49 197 -65 23 0 0 0 chr5 33208992 33209015 -166421135 + AT_rich Low_complexity Low_complexity 1 23 0 1352 210 37 23 chr5 33209520 33209873 -166420277 + THE1C LTR MaLR 1 358 -17 1474 244 5 5 chr5 33210425 33210823 -166419327 + L1M4 LINE L1 2459 2856 -3290 193 333 69 0 chr5 33210933 33211005 -166419145 - L2 LINE L2 -95 3177 3101 1771 199 10 0 chr5 33211359 33211660 -166418490 - AluJb SINE Alu -8 304 1 225 228 211 0 chr5 33211714 33211771 -166418379 + L2 LINE L2 3238 3306 -7 221 287 17 43 chr5 33212325 33212440 -166417710 + MIR3 SINE MIR 95 206 -2 285 121 133 60 chr5 33213260 33213343 -166416807 - MER103 DNA DNA -19 147 59 1811 176 0 0 chr5 33213672 33213950 -166416200 + AluSx SINE Alu 1 278 -34 207 0 0 0 chr5 33213955 33213978 -166416172 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2193 140 7 0 chr5 33214116 33214423 -166415727 + AluSx SINE Alu 1 309 -3 981 206 37 19 chr5 33215019 33215233 -166414917 - MER20 DNA MER1_type -1 218 1 1601 153 52 55 chr5 33215310 33215675 -166414475 + THE1B LTR MaLR 1 364 0 204 347 73 27 chr5 33215952 33216102 -166414048 - MIR3 SINE MIR -25 183 27 1655 187 3 11 chr5 33217520 33217830 -166412320 - AluJo SINE Alu 0 309 2 303 240 53 13 chr5 33217834 33217909 -166412241 - L2 LINE L2 -16 3297 3220 2521 91 0 0 chr5 33218064 33218373 -166411777 + AluSg SINE Alu 1 309 -1 251 239 15 0 chr5 33218473 33218540 -166411610 + L1ME4a LINE L1 5969 6036 -85 1177 128 66 0 chr5 33218588 33218799 -166411351 - Tigger7 DNA MER2_type -1 2490 2266 * 1184 240 39 0 chr5 33218795 33219053 -166411097 - Tigger7 DNA MER2_type -465 268 1 744 226 24 0 chr5 33220744 33220908 -166409242 + MER58A DNA MER1_type 49 216 -8 1291 117 0 0 chr5 33221640 33221820 -166408330 - AluSp SINE Alu -1 312 133 637 263 129 0 chr5 33221911 33222105 -166408045 + MIR SINE MIR 19 237 -25 1071 149 0 0 chr5 33222159 33222334 -166407816 + MER58B DNA MER1_type 167 341 0 2366 79 0 10 chr5 33222707 33223011 -166407139 - AluY SINE Alu -8 303 3 460 61 0 15 chr5 33223027 33223093 -166407057 - L1PA16 LINE L1 -10 6156 6092 191 243 95 27 chr5 33224929 33225003 -166405147 - MIR SINE MIR -68 194 116 226 325 86 68 chr5 33225896 33226059 -166404091 + MIR3 SINE MIR 19 184 -24 336 287 127 27 chr5 33226213 33226363 -166403787 - MIR3 SINE MIR -14 194 30 317 58 69 23 chr5 33226614 33226701 -166403449 + (TCTA)n Simple_repeat Simple_repeat 3 93 0 284 284 231 53 chr5 33226888 33227191 -166402959 + MLT1K LTR MaLR 115 471 -117 1927 132 10 27 chr5 33227274 33227569 -166402581 + AluSx SINE Alu 1 290 -22 5510 130 12 5 chr5 33227796 33229218 -166400932 - L1PA15 LINE L1 -6 6159 4734 3855 197 16 14 chr5 33229218 33230495 -166399655 - L1PA12 LINE L1 -3963 3621 2321 317 325 58 25 chr5 33231500 33231744 -166398406 - L1PA12 LINE L1 -6595 990 1 2583 132 5 0 chr5 33231994 33232442 -166397708 - L1P LINE L1 -1013 5133 4684 209 108 27 0 chr5 33232462 33232499 -166397651 + GA-rich Low_complexity Low_complexity 2 39 0 2389 90 0 0 chr5 33232510 33232809 -166397341 + AluY SINE Alu 1 299 -12 5813 82 7 27 chr5 33232812 33233694 -166396456 + L1PA10 LINE L1 5305 6168 0 414 273 95 24 chr5 33233749 33233974 -166396176 + MLT1J LTR MaLR 1 237 -275 914 228 56 19 chr5 33234035 33234250 -166395900 + MER58A DNA MER1_type 2 224 0 1159 232 55 27 chr5 33234678 33235124 -166395026 + MLT2B1 LTR ERVL 1 495 -20 295 121 35 0 chr5 33235154 33235212 -166394938 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 1001 209 23 27 chr5 33235567 33235787 -166394363 + MER20 DNA MER1_type 1 219 0 2204 178 15 10 chr5 33236126 33236520 -166393630 - MSTD LTR MaLR 0 396 1 266 239 100 31 chr5 33236648 33236778 -166393372 - MIR SINE MIR -4 258 120 532 264 50 13 chr5 33237463 33237622 -166392528 + MER45A DNA AcHobo 6 170 -8 775 299 96 15 chr5 33237625 33238106 -166392044 - ERVL LTR ERVL -426 5338 4819 678 167 44 0 chr5 33238253 33238405 -166391745 + FLAM_C SINE Alu 1 157 0 1945 120 70 22 chr5 33238432 33238790 -166391360 + THE1C LTR MaLR 1 375 0 4136 47 10 2 chr5 33239061 33239721 -166390429 - L1PA5 LINE L1 -650 5504 4841 5626 31 0 0 chr5 33239721 33240362 -166389788 + L1PA5 LINE L1 5493 6146 -8 239 246 191 55 chr5 33240867 33240977 -166389173 - L2 LINE L2 -10 3303 3179 1441 179 0 35 chr5 33241005 33241262 -166388888 + AluJb SINE Alu 48 295 -17 1123 187 0 11 chr5 33241278 33241465 -166388685 + AluJo SINE Alu 118 302 -10 225 0 0 0 chr5 33241504 33241515 -166388635 + (CA)n Simple_repeat Simple_repeat 1 36 0 225 0 0 0 chr5 33241515 33241540 -166388610 + (CA)n Simple_repeat Simple_repeat 2 26 0 281 361 58 5 chr5 33241701 33241909 -166388241 - ERVL LTR ERVL -560 5204 4986 328 287 11 0 chr5 33241956 33242043 -166388107 + L1MC4 LINE L1 6616 6703 -1339 1139 164 250 27 chr5 33242140 33242618 -166387532 - LTR29 LTR ERV1 0 607 1 198 354 88 0 chr5 33242884 33242997 -166387153 - L2 LINE L2 -549 2765 2643 323 281 116 49 chr5 33244201 33244365 -166385785 - MIR3 SINE MIR 0 208 34 198 0 0 0 chr5 33245214 33245236 -166384914 + (T)n Simple_repeat Simple_repeat 1 22 0 548 232 40 73 chr5 33245355 33245436 -166384714 - MIR SINE MIR -1 261 179 1805 65 119 8 chr5 33245436 33245697 -166384453 - AluSc SINE Alu -19 290 1 548 232 40 73 chr5 33245697 33245792 -166384358 - MIR SINE MIR -83 179 91 264 288 92 65 chr5 33246041 33246194 -166383956 + MIR3 SINE MIR 16 172 -36 480 35 0 0 chr5 33246197 33246255 -166383895 + (TC)n Simple_repeat Simple_repeat 1 58 0 2476 47 0 22 chr5 33246371 33246689 -166383461 - AluY SINE Alu 0 311 1 25 31 0 0 chr5 33246840 33246872 -166383278 + AT_rich Low_complexity Low_complexity 1 32 0 2053 137 56 22 chr5 33246908 33247317 -166382833 + L1MB8 LINE L1 5740 6162 -16 21 57 0 0 chr5 33248103 33248138 -166382012 + AT_rich Low_complexity Low_complexity 1 35 0 614 191 16 32 chr5 33249926 33250052 -166380098 + FAM SINE Alu 42 165 -20 1981 149 0 0 chr5 33250136 33250441 -166379709 - AluSx SINE Alu 0 305 1 258 192 0 0 chr5 33252201 33252253 -166377897 + (TA)n Simple_repeat Simple_repeat 2 53 0 2638 45 0 10 chr5 33252325 33252637 -166377513 - AluY SINE Alu -2 309 1 498 203 102 0 chr5 33252637 33252765 -166377385 + MER58C DNA MER1_type 71 211 -4 24 53 0 0 chr5 33253070 33253108 -166377042 + AT_rich Low_complexity Low_complexity 1 38 0 211 388 103 0 chr5 33253462 33253627 -166376523 - MIR3 SINE MIR -23 185 4 2124 124 3 0 chr5 33253715 33254013 -166376137 + AluSx SINE Alu 1 299 -13 2404 53 3 10 chr5 33254256 33254555 -166375595 - AluY SINE Alu -14 297 1 643 168 48 16 chr5 33255728 33255853 -166374297 + FLAM_A SINE Alu 5 133 0 23 33 0 0 chr5 33256061 33256091 -166374059 + AT_rich Low_complexity Low_complexity 1 30 0 198 0 0 0 chr5 33256146 33256168 -166373982 + (T)n Simple_repeat Simple_repeat 1 22 0 2214 120 0 10 chr5 33256593 33256901 -166373249 - AluSx SINE Alu -7 305 1 288 193 18 0 chr5 33259743 33259800 -166370350 + AluJb SINE Alu 190 247 -55 1238 157 9 14 chr5 33259800 33260010 -166370140 - AluJo SINE Alu -99 213 5 292 286 29 29 chr5 33260603 33260708 -166369442 - MIR3 SINE MIR -23 185 81 286 285 87 39 chr5 33262297 33262504 -166367646 - L1ME LINE L1 -347 5823 5607 244 154 200 0 chr5 33262943 33263008 -166367142 - AluJo SINE Alu -1 301 224 1036 180 0 28 chr5 33263008 33263186 -166366964 - AluJo SINE Alu -139 173 1 797 228 11 17 chr5 33266965 33267145 -166363005 - AluJo SINE Alu -12 300 122 830 160 100 0 chr5 33267551 33267701 -166362449 + FAM SINE Alu 4 168 -7 2279 77 40 3 chr5 33267709 33268008 -166362142 + AluY SINE Alu 1 310 -1 32 43 0 0 chr5 33270015 33270061 -166360089 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr5 33270975 33270998 -166359152 + AT_rich Low_complexity Low_complexity 1 23 0 1426 156 141 8 chr5 33271510 33271773 -166358377 - AluJb SINE Alu -4 298 1 1840 200 73 65 chr5 33271825 33272375 -166357775 + MLT2B3 LTR ERVL 1 554 0 1756 175 0 29 chr5 33272765 33273074 -166357076 - AluJb SINE Alu -10 302 3 313 190 281 33 chr5 33273624 33273745 -166356405 - MER5A DNA MER1_type -1 188 38 27 0 0 0 chr5 33273806 33273833 -166356317 + AT_rich Low_complexity Low_complexity 1 27 0 1379 178 23 23 chr5 33273984 33274242 -166355908 - AluJo SINE Alu -51 261 4 302 223 159 43 chr5 33274280 33274513 -166355637 - HAL1 LINE L1 -224 2283 2024 2118 139 0 3 chr5 33274528 33274830 -166355320 + AluSx SINE Alu 1 301 -11 1692 186 21 3 chr5 33274840 33275130 -166355020 + AluJb SINE Alu 1 295 -17 651 181 0 0 chr5 33275155 33275260 -166354890 + FLAM_C SINE Alu 1 105 -38 342 267 135 20 chr5 33275262 33275565 -166354585 - HAL1 LINE L1 -938 1569 1232 446 236 150 64 chr5 33275572 33275839 -166354311 - HAL1 LINE L1 -1355 1152 863 4503 147 75 12 chr5 33275955 33276800 -166353350 + MER4D LTR ERV1 1 898 -5 365 252 135 58 chr5 33276928 33277224 -166352926 + MLT1L LTR MaLR 208 437 -74 879 164 26 0 chr5 33277337 33277489 -166352661 + FRAM SINE Alu 1 155 -21 2541 113 11 5 chr5 33277513 33277886 -166352264 - THE1C LTR MaLR 0 375 1 246 317 192 0 chr5 33278525 33278629 -166351521 + MIR SINE MIR 26 149 -113 1852 139 174 8 chr5 33278634 33279001 -166351149 + MSTA LTR MaLR 1 428 0 237 271 141 12 chr5 33279409 33279494 -166350656 - LTR67 LTR ERVL -412 145 50 482 288 40 45 chr5 33279514 33279612 -166350538 - MER34 LTR ERV1 -30 512 415 2306 176 54 120 chr5 33279612 33280389 -166349761 + LTR8A LTR ERV1 2 727 0 482 288 40 45 chr5 33280389 33280512 -166349638 - MER34 LTR ERV1 -127 415 292 2342 96 3 0 chr5 33280521 33280823 -166349327 - AluSg SINE Alu -7 303 1 376 326 85 13 chr5 33280888 33281124 -166349026 - MER34 LTR ERV1 -278 264 12 207 0 0 0 chr5 33281485 33281508 -166348642 + (T)n Simple_repeat Simple_repeat 1 23 0 270 333 96 45 chr5 33281562 33281739 -166348411 + MER5A DNA MER1_type 4 189 0 35 24 0 0 chr5 33281770 33281812 -166348338 + AT_rich Low_complexity Low_complexity 1 42 0 295 287 198 0 chr5 33282171 33282328 -166347822 - MER5A DNA MER1_type 0 189 2 203 149 0 21 chr5 33282623 33282670 -166347480 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 1890 167 50 26 chr5 33282684 33283067 -166347083 - MER57A LTR ERV1 0 403 12 1279 144 159 30 chr5 33283116 33283386 -166346764 + AluSg SINE Alu 1 305 -5 780 194 33 4 chr5 33283391 33283715 -166346435 + MLT1D LTR MaLR 9 378 -127 473 141 6 65 chr5 33283738 33283908 -166346242 + GA-rich Low_complexity Low_complexity 5 164 0 236 339 0 0 chr5 33283919 33283981 -166346169 + polypurine Low_complexity Low_complexity 4 65 0 265 252 13 26 chr5 33283982 33284137 -166346013 + GA-rich Low_complexity Low_complexity 4 156 0 283 264 6 22 chr5 33284150 33284328 -166345822 + GA-rich Low_complexity Low_complexity 2 176 0 882 222 16 0 chr5 33285745 33285930 -166344220 - MER5A DNA MER1_type 0 189 2 1189 49 12 12 chr5 33287141 33287303 -166342847 - L1PA6 LINE L1 0 6154 5993 267 137 0 0 chr5 33287396 33287447 -166342703 + L1MC4 LINE L1 7986 8036 -6 190 0 32 32 chr5 33287577 33287608 -166342542 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2280 94 0 16 chr5 33287663 33287970 -166342180 - AluSx SINE Alu -10 302 1 267 200 0 0 chr5 33287971 33288016 -166342134 - L1ME1 LINE L1 -56 6110 6066 317 246 0 0 chr5 33289331 33289396 -166340754 + MIR SINE MIR 92 156 -106 458 169 28 113 chr5 33289481 33289623 -166340527 - MER5C DNA MER1_type 0 324 195 25 31 0 0 chr5 33289683 33289715 -166340435 + AT_rich Low_complexity Low_complexity 1 32 0 2306 121 0 3 chr5 33289917 33290230 -166339920 - AluSx SINE Alu 0 312 1 270 333 50 0 chr5 33290348 33290447 -166339703 - MER5C DNA MER1_type -219 105 2 * 396 208 0 0 chr5 33290447 33290519 -166339631 - MIR SINE MIR -45 217 146 2272 104 3 22 chr5 33291307 33291625 -166338525 + AluSx SINE Alu 1 312 0 565 180 107 16 chr5 33292019 33292141 -166338009 - FRAM SINE Alu -43 133 1 31 0 0 0 chr5 33292146 33292177 -166337973 + AT_rich Low_complexity Low_complexity 1 31 0 653 197 163 0 chr5 33292203 33292381 -166337769 + Tigger5 DNA MER2_type 2117 2323 0 369 0 0 0 chr5 33292407 33292448 -166337702 + (TG)n Simple_repeat Simple_repeat 2 42 0 266 259 12 12 chr5 33292448 33292533 -166337617 - L1MC4 LINE L1 -149 7893 7809 729 211 155 10 chr5 33292561 33292755 -166337395 + MER97b DNA MER1_type? 13 234 -819 1307 174 81 68 chr5 33292768 33293199 -166336951 + LTR48 LTR ERV1 1 451 -246 1912 137 81 0 chr5 33293199 33293556 -166336594 + LTR24C LTR ERV1 248 633 -2 1796 185 7 0 chr5 33293632 33293929 -166336221 + AluJb SINE Alu 1 299 -13 672 196 18 0 chr5 33294026 33294138 -166336012 - FLAM_A SINE Alu -19 114 1 297 272 87 0 chr5 33294230 33294333 -166335817 + MIR SINE MIR 90 201 -61 * 468 264 104 0 chr5 33294310 33294454 -166335696 - MIR SINE MIR -12 250 92 311 299 18 55 chr5 33294533 33294697 -166335453 - MER52A LTR ERV1 -6 1749 1592 * 878 223 3 106 chr5 33294695 33294987 -166335163 - MER52A LTR ERV1 -285 1470 1209 * 1922 185 24 18 chr5 33294968 33295606 -166334544 - LTR28 LTR ERV1 -141 495 1 666 151 50 8 chr5 33295634 33295753 -166334397 + FLAM_C SINE Alu 3 126 -7 351 0 0 0 chr5 33295762 33295801 -166334349 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 773 240 6 6 chr5 33295817 33295988 -166334162 + MER92B LTR ERV1 1 171 -465 980 179 97 151 chr5 33295995 33296330 -166333820 - LTR29 LTR ERV1 -46 576 271 204 40 0 0 chr5 33296330 33296355 -166333795 + (TC)n Simple_repeat Simple_repeat 2 26 0 980 179 97 151 chr5 33296355 33296484 -166333666 - LTR29 LTR ERV1 -351 271 137 228 313 10 10 chr5 33296489 33296585 -166333565 - MER34 LTR ERV1 -446 96 1 * 1536 165 92 104 chr5 33296585 33296895 -166333255 + MER92B LTR ERV1 157 460 -176 1507 166 21 46 chr5 33296895 33297179 -166332971 - AluJo SINE Alu -35 277 1 1536 165 92 104 chr5 33297179 33297354 -166332796 + MER92B LTR ERV1 460 636 0 2295 175 75 124 chr5 33297474 33298239 -166331911 - LTR8A LTR ERV1 0 727 1 316 292 130 38 chr5 33298263 33298448 -166331702 - LTR33 LTR ERVL -3 518 317 2392 180 22 24 chr5 33298550 33298563 -166331587 + MER65C LTR ERV1 1 13 -448 3001 156 36 39 chr5 33298563 33298941 -166331209 + LTR26B LTR ERV1 1 378 -153 1977 158 0 7 chr5 33298941 33299244 -166330906 + AluSx SINE Alu 1 301 -11 3001 156 36 39 chr5 33299244 33299398 -166330752 + LTR26B LTR ERV1 378 531 0 2392 180 22 24 chr5 33299398 33299846 -166330304 + MER65C LTR ERV1 13 461 0 225 184 0 0 chr5 33300153 33300191 -166329959 - LTR16A1 LTR ERVL 0 457 420 344 300 29 12 chr5 33300222 33300392 -166329758 + L1MC4a LINE L1 4034 4206 -1940 298 276 92 75 chr5 33300388 33300562 -166329588 + L1MC4a LINE L1 5422 5598 -2210 * 572 258 47 25 chr5 33300621 33300866 -166329284 + L1MC4a LINE L1 5692 5943 -178 3073 171 55 4 chr5 33301762 33302289 -166327861 - MER21A LTR ERV1 0 931 378 517 178 107 12 chr5 33302295 33302489 -166327661 - MER21A LTR ERV1 -667 264 14 257 255 20 0 chr5 33302495 33302597 -166327553 + (TATATG)n Simple_repeat Simple_repeat 1 104 0 625 231 8 8 chr5 33302937 33303067 -166327083 - FLAM_A SINE Alu -3 130 1 550 262 40 48 chr5 33303176 33303424 -166326726 - MER34B LTR ERV1 0 565 320 2242 120 0 3 chr5 33303449 33303758 -166326392 - AluSc SINE Alu -1 308 1 207 100 0 0 chr5 33303763 33303793 -166326357 + (T)n Simple_repeat Simple_repeat 1 30 0 1591 204 10 13 chr5 33303797 33304110 -166326040 - AluJb SINE Alu 0 312 1 2178 106 0 7 chr5 33304137 33304440 -166325710 + AluSx SINE Alu 2 302 0 322 261 70 26 chr5 33304549 33304664 -166325486 - MER34B LTR ERV1 -445 120 1 377 337 17 11 chr5 33305366 33305544 -166324606 - L1ME LINE L1 -429 5692 5514 1008 172 50 10 chr5 33305947 33306145 -166324005 + AluJo SINE Alu 107 312 0 346 186 0 12 chr5 33306168 33306254 -166323896 - L1MA7 LINE L1 0 6291 6207 658 142 42 0 chr5 33306482 33306602 -166323548 - L1MA6 LINE L1 -80 6220 6096 283 254 111 56 chr5 33306665 33306791 -166323359 - MER5A DNA MER1_type -56 133 1 476 293 25 13 chr5 33307057 33307214 -166322936 - MLT1G1 LTR MaLR -7 588 430 537 260 32 13 chr5 33307309 33307463 -166322687 - MLT1H1 LTR MaLR -367 188 32 27 49 0 0 chr5 33307607 33307648 -166322502 + AT_rich Low_complexity Low_complexity 1 41 0 2281 120 0 0 chr5 33310121 33310430 -166319720 - AluSq SINE Alu -4 309 1 579 212 0 17 chr5 33310635 33310753 -166319397 + MLT1F LTR MaLR 1 116 -426 408 285 13 7 chr5 33310859 33311010 -166319140 + MER103 DNA DNA 13 164 -2 2236 111 0 7 chr5 33311090 33311388 -166318762 + AluSx SINE Alu 1 296 -16 25 75 0 0 chr5 33311669 33311722 -166318428 + AT_rich Low_complexity Low_complexity 1 53 0 25 0 0 0 chr5 33311872 33311897 -166318253 + AT_rich Low_complexity Low_complexity 1 25 0 1893 174 0 7 chr5 33311897 33312207 -166317943 - AluJb SINE Alu -4 308 1 2279 103 33 43 chr5 33312684 33313052 -166317098 - THE1B LTR MaLR 0 364 1 1661 199 0 7 chr5 33313237 33313539 -166316611 - AluJo SINE Alu -10 302 3 3687 213 20 50 chr5 33313558 33314502 -166315648 + MER31-int LTR ERV1 3329 4244 -692 310 245 93 29 chr5 33314506 33314645 -166315505 + LTR37A LTR ERV1 1 148 -278 3620 148 43 50 chr5 33315115 33315370 -166314780 - L1MA7 LINE L1 -303 5988 5733 2530 52 0 16 chr5 33315370 33315676 -166314474 + AluY SINE Alu 1 301 -10 3620 148 43 50 chr5 33315676 33316632 -166313518 - L1MA7 LINE L1 -558 5733 4785 279 0 0 0 chr5 33316803 33316834 -166313316 + (TG)n Simple_repeat Simple_repeat 1 31 0 386 271 129 39 chr5 33317012 33317167 -166312983 + MER5A DNA MER1_type 16 184 -5 2819 164 39 30 chr5 33317241 33317396 -166312754 + MER89 LTR ERV1 4 156 -403 1877 157 7 10 chr5 33317396 33317689 -166312461 - AluJb SINE Alu -20 292 1 2819 164 39 30 chr5 33317689 33318075 -166312075 + MER89 LTR ERV1 156 550 -9 2001 138 0 23 chr5 33318643 33318948 -166311202 - AluSx SINE Alu -14 298 1 369 247 10 10 chr5 33320014 33320111 -166310039 + MER115 DNA AcHobo 597 693 0 4673 115 86 118 chr5 33320445 33321866 -166308284 - pTR5 LTR ERV1 0 2438 743 2116 186 65 108 chr5 33322358 33323051 -166307099 + LTR8A LTR ERV1 1 663 -64 553 110 0 0 chr5 33324745 33324818 -166305332 + FRAM SINE Alu 70 142 -34 2500 110 31 6 chr5 33325084 33325439 -166304711 + THE1B LTR MaLR 1 364 0 675 218 40 17 chr5 33325502 33325676 -166304474 - LTR16C LTR ERVL -15 476 299 559 175 132 9 chr5 33325929 33326043 -166304107 + MER5A DNA MER1_type 3 130 -59 1387 198 31 42 chr5 33326045 33326399 -166303751 - L1ME2 LINE L1 -145 6019 5670 583 220 53 8 chr5 33326528 33326660 -166303490 + MER82 DNA MER2_type 294 431 -222 2262 114 7 0 chr5 33326668 33326974 -166303176 + AluSx SINE Alu 1 308 -4 428 211 266 0 chr5 33327007 33327116 -166303034 + MER82 DNA MER2_type 510 647 -6 1590 178 45 14 chr5 33327146 33327313 -166302837 - AluJo SINE Alu -17 295 114 468 0 0 0 chr5 33327313 33327365 -166302785 + (TA)n Simple_repeat Simple_repeat 2 53 0 1590 178 45 14 chr5 33327365 33327483 -166302667 - AluJo SINE Alu -198 114 1 792 169 15 0 chr5 33327489 33327619 -166302531 - FLAM_C SINE Alu -1 132 1 1084 181 18 53 chr5 33328440 33328666 -166301484 - MER20 DNA MER1_type 0 219 2 192 317 0 0 chr5 33328739 33328799 -166301351 - L2 LINE L2 -218 3054 2995 239 276 0 26 chr5 33333546 33333622 -166296528 + MLT1H LTR MaLR 95 168 -381 3036 84 28 56 chr5 33333851 33334350 -166295800 + L1PB2 LINE L1 5666 6150 -1 532 312 45 10 chr5 33334432 33334631 -166295519 - MIR SINE MIR -51 211 6 2457 80 7 0 chr5 33334679 33334979 -166295171 + AluSq SINE Alu 1 302 -11 2126 108 10 20 chr5 33335843 33336140 -166294010 - AluSx SINE Alu -18 294 1 1222 251 26 62 chr5 33336760 33337226 -166292924 + MLT1C LTR MaLR 2 450 -17 268 277 124 36 chr5 33337302 33337512 -166292638 - MIR SINE MIR -15 247 21 266 283 71 9 chr5 33338176 33338289 -166291861 + L2 LINE L2 3153 3272 0 461 228 235 0 chr5 33339314 33339463 -166290687 - MER5A DNA MER1_type -2 187 4 471 323 47 17 chr5 33339626 33339861 -166290289 + L2 LINE L2 2243 2484 -830 535 342 46 26 chr5 33340041 33340348 -166289802 + LTR16A1 LTR ERVL 141 453 -4 23 0 0 0 chr5 33340519 33340542 -166289608 + AT_rich Low_complexity Low_complexity 1 23 0 229 210 37 37 chr5 33341242 33341323 -166288827 + MLT1K LTR MaLR 183 263 -325 1007 155 12 6 chr5 33342061 33342222 -166287928 - AluSg/x SINE Alu -22 290 129 313 222 59 111 chr5 33342329 33342482 -166287668 - HAL1 LINE L1 -2342 165 21 233 158 0 0 chr5 33343228 33343266 -166286884 - LTR65 LTR ERV1 -285 384 347 2117 138 47 11 chr5 33343994 33344356 -166285794 - THE1C LTR MaLR 0 375 1 2277 125 0 0 chr5 33344853 33345156 -166284994 - AluSx SINE Alu -9 303 1 33952 83 4 14 chr5 33345740 33351938 -166278212 + L1PA6 LINE L1 5 6154 0 959 222 16 0 chr5 33353158 33353343 -166276807 + MER5A DNA MER1_type 2 189 0 330 349 54 12 chr5 33354227 33354393 -166275757 + MIR SINE MIR 42 214 -48 297 0 0 0 chr5 33354627 33354660 -166275490 + (CA)n Simple_repeat Simple_repeat 1 33 0 272 266 83 0 chr5 33355519 33355628 -166274522 + MIR SINE MIR 66 183 -79 191 423 8 0 chr5 33356463 33356593 -166273557 + L2 LINE L2 2938 3068 -245 323 342 36 36 chr5 33358184 33358341 -166271809 + MIR3 SINE MIR 3 163 -45 917 158 6 6 chr5 33358589 33358752 -166271398 - L1 LINE L1 -1284 4862 4697 7045 67 11 10 chr5 33358752 33359803 -166270347 + L1PA13 LINE L1 5108 6160 -3 200 152 0 0 chr5 33359879 33359912 -166270238 - MIR SINE MIR -14 248 216 345 331 126 30 chr5 33360013 33360276 -166269874 - L2 LINE L2 -181 3091 2804 265 325 33 25 chr5 33360493 33360613 -166269537 + Tigger8 DNA MER2_type 539 659 -7 1727 169 3 17 chr5 33361181 33361476 -166268674 - AluSx SINE Alu -21 291 1 256 167 90 39 chr5 33361485 33361563 -166268587 + MER104 DNA Tc2 35 116 -64 381 302 22 50 chr5 33362030 33362212 -166267938 - MIR SINE MIR -57 205 29 1617 146 102 50 chr5 33362400 33362916 -166267234 + LTR18B LTR ERVL 1 591 -23 826 164 16 8 chr5 33363438 33363566 -166266584 + AluJb SINE Alu 163 291 -21 3715 127 27 14 chr5 33363637 33364157 -166265993 + MER1A DNA MER1_type 1 527 0 2224 129 3 0 chr5 33365526 33365836 -166264314 + AluSx SINE Alu 1 311 -1 5439 40 3 0 chr5 33366239 33366860 -166263290 + L1PA5 LINE L1 5532 6154 0 430 284 35 47 chr5 33367186 33367355 -166262795 + MER5B DNA MER1_type 6 172 -6 1708 187 7 0 chr5 33367427 33367716 -166262434 + AluJo SINE Alu 1 291 -21 561 188 169 0 chr5 33367989 33368143 -166262007 - MER5A DNA MER1_type -1 188 9 2095 138 3 0 chr5 33368561 33368857 -166261293 - AluSx SINE Alu -15 297 1 1108 231 63 7 chr5 33369135 33369404 -166260746 + MLT1H LTR MaLR 6 289 -260 705 269 109 0 chr5 33369716 33369917 -166260233 - MIR SINE MIR -10 252 30 233 318 75 30 chr5 33370103 33370304 -166259846 - L2 LINE L2 -213 3059 2850 360 288 29 29 chr5 33370594 33370733 -166259417 - MER20 DNA MER1_type -17 202 64 23 0 0 0 chr5 33371069 33371092 -166259058 + AT_rich Low_complexity Low_complexity 1 23 0 1816 139 25 7 chr5 33371092 33371373 -166258777 - AluSx SINE Alu -26 286 1 186 71 0 0 chr5 33371586 33371614 -166258536 + (T)n Simple_repeat Simple_repeat 1 28 0 1469 186 18 21 chr5 33372114 33372393 -166257757 + AluJo SINE Alu 12 289 -23 250 314 77 39 chr5 33372410 33372617 -166257533 + L2 LINE L2 2454 2668 -646 1130 213 79 50 chr5 33372618 33373036 -166257114 + MLT1J1 LTR MaLR 2 431 -15 469 324 53 6 chr5 33373820 33373990 -166256160 + MIR SINE MIR 25 202 -60 44731 39 1 2 chr5 33374577 33380686 -166249464 + L1PA3 LINE L1 53 6155 0 357 317 24 0 chr5 33381277 33381400 -166248750 - MIR3 SINE MIR -2 206 81 21 0 0 0 chr5 33384859 33384880 -166245270 + AT_rich Low_complexity Low_complexity 1 21 0 190 302 63 0 chr5 33385615 33385678 -166244472 + MIR SINE MIR 120 186 -76 205 205 0 0 chr5 33385756 33385795 -166244355 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2307 137 27 19 chr5 33386097 33386469 -166243681 - THE1C LTR MaLR 0 375 1 370 188 34 51 chr5 33386660 33386777 -166243373 + Charlie8 DNA MER1_type 77 191 -2226 2249 180 56 16 chr5 33387609 33388054 -166242096 + MLT1C LTR MaLR 1 463 -4 7130 101 6 1 chr5 33388776 33389769 -166240381 - L1MA1 LINE L1 -4 6298 5292 598 220 120 66 chr5 33389960 33390201 -166239949 + MIR SINE MIR 2 255 -7 374 238 26 22 chr5 33390522 33390689 -166239461 - MIR SINE MIR -13 249 54 390 57 0 0 chr5 33390949 33391002 -166239148 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 227 269 0 0 chr5 33391429 33391481 -166238669 - MIR SINE MIR -203 59 8 1856 140 11 0 chr5 33393382 33393646 -166236504 - AluJb SINE Alu -26 286 20 356 269 105 35 chr5 33395017 33395188 -166234962 + MIR SINE MIR 80 262 0 22 56 0 0 chr5 33395763 33395799 -166234351 + AT_rich Low_complexity Low_complexity 1 36 0 1082 241 103 41 chr5 33396230 33396550 -166233600 + MSTD LTR MaLR 1 340 -56 822 154 31 0 chr5 33396558 33396688 -166233462 - FLAM_C SINE Alu -8 135 2 515 83 28 0 chr5 33396692 33396764 -166233386 + MSTD LTR MaLR 323 396 0 258 32 0 0 chr5 33396995 33397026 -166233124 + (TG)n Simple_repeat Simple_repeat 1 31 0 893 151 0 123 chr5 33397635 33397847 -166232303 + MER20 DNA MER1_type 1 186 -33 2512 66 0 25 chr5 33397850 33398169 -166231981 + AluSp SINE Alu 1 311 -2 287 200 18 0 chr5 33398193 33398248 -166231902 + MER20 DNA MER1_type 164 219 0 23 86 0 0 chr5 33398552 33398610 -166231540 + AT_rich Low_complexity Low_complexity 1 58 0 31 26 0 0 chr5 33398862 33398900 -166231250 + AT_rich Low_complexity Low_complexity 1 38 0 1490 132 5 0 chr5 33398907 33399119 -166231031 + AluSx SINE Alu 2 214 -98 387 280 62 43 chr5 33399245 33399456 -166230694 + MIR SINE MIR 8 222 -40 2317 55 3 17 chr5 33399478 33399770 -166230380 + L1PA8 LINE L1 5882 6169 -3 1918 154 33 27 chr5 33399948 33400280 -166229870 + THE1B LTR MaLR 1 334 -30 341 232 42 21 chr5 33401182 33401277 -166228873 - MIR SINE MIR -61 201 105 220 244 188 38 chr5 33401554 33401714 -166228436 - MIR3 SINE MIR -13 195 12 1180 248 150 38 chr5 33402877 33403410 -166226740 + MLT1G LTR MaLR 1 588 -2 337 252 181 0 chr5 33403532 33403659 -166226491 + LTR33 LTR ERVL 1 150 -371 * 395 276 118 54 chr5 33403657 33403860 -166226290 + LTR33 LTR ERVL 304 519 -2 351 0 0 0 chr5 33405251 33405290 -166224860 + (TG)n Simple_repeat Simple_repeat 1 39 0 240 170 57 0 chr5 33405549 33405602 -166224548 + GA-rich Low_complexity Low_complexity 6 61 0 349 197 95 80 chr5 33405864 33406001 -166224149 + MIR SINE MIR 53 191 -71 572 188 97 49 chr5 33457972 33458116 -166172034 - MER31A LTR ERV1 -334 151 1 1585 167 52 0 chr5 33458137 33458407 -166171743 - AluSx SINE Alu -12 300 17 947 242 19 0 chr5 33458602 33458817 -166171333 - MER20 DNA MER1_type 0 219 1 2334 87 3 0 chr5 33458869 33459158 -166170992 - AluSp SINE Alu -18 295 6 1110 127 6 0 chr5 33459902 33460067 -166170083 - AluSg/x SINE Alu 0 310 145 910 161 112 45 chr5 33460180 33460422 -166169728 + Charlie5 DNA MER1_type 2328 2585 -27 202 205 0 0 chr5 33460823 33460862 -166169288 + GA-rich Low_complexity Low_complexity 2 40 0 2458 138 5 35 chr5 33460911 33461340 -166168810 + L1MB3 LINE L1 5759 6174 -9 2638 37 0 0 chr5 33461593 33461893 -166168257 + AluY SINE Alu 1 300 -11 199 373 73 9 chr5 33462830 33462940 -166167210 - L2 LINE L2 -19 3253 3137 2984 79 33 12 chr5 33462941 33463360 -166166790 + LTR10D LTR ERV1 1 428 -85 7504 64 1 0 chr5 33463650 33464687 -166165463 + L1PA7 LINE L1 5099 6154 0 6098 81 24 29 chr5 33464703 33465595 -166164555 + L1PA10 LINE L1 5281 6167 -1 649 343 58 38 chr5 33466222 33466674 -166163476 - L2 LINE L2 -12 3301 2841 213 323 138 8 chr5 33467694 33467824 -166162326 + MIR SINE MIR 2 148 -114 794 74 89 0 chr5 33468287 33468422 -166161728 + LTR10D LTR ERV1 367 513 0 1184 100 0 0 chr5 33469105 33469255 -166160895 + AluSx SINE Alu 4 153 -159 2435 99 0 0 chr5 33469321 33469633 -166160517 + AluSq SINE Alu 1 312 -1 1148 221 50 22 chr5 33469655 33470017 -166160133 + L1MD2 LINE L1 4787 5158 -988 625 197 59 20 chr5 33470040 33470192 -166159958 + L1MB7 LINE L1 6027 6184 0 * 5483 167 65 15 chr5 33470175 33471327 -166158823 + L1MD2 LINE L1 5159 6357 -2 2188 228 26 28 chr5 33473666 33474202 -166155948 - L1MA10 LINE L1 0 6334 5800 1343 148 29 6 chr5 33474204 33474642 -166155508 + LTR54 LTR ERV1 3 510 0 2933 194 50 2 chr5 33474642 33475488 -166154662 - L1MA10 LINE L1 -529 5805 4922 1615 132 92 4 chr5 33475484 33475711 -166154439 - L1PB1 LINE L1 -130 6021 5763 * 321 26 0 0 chr5 33475711 33475749 -166154401 + (TG)n Simple_repeat Simple_repeat 2 39 0 1615 132 92 4 chr5 33475749 33475802 -166154348 - L1PB1 LINE L1 -388 5763 5716 600 191 40 0 chr5 33475795 33475921 -166154229 - L1PB1 LINE L1 -814 5332 5202 * 1411 157 52 41 chr5 33475922 33475971 -166154179 + L1 LINE L1 4309 4356 -1790 2013 121 14 0 chr5 33475971 33476282 -166153868 + AluSx SINE Alu 1 315 0 1411 157 52 41 chr5 33476282 33476575 -166153575 + L1 LINE L1 4356 4656 -1490 3341 95 97 0 chr5 33476658 33477151 -166152999 - L1P LINE L1 -3513 2633 2093 * 6317 97 3 3 chr5 33477150 33478027 -166152123 + L1P LINE L1 3896 4772 -1374 1159 153 0 0 chr5 33478153 33478356 -166151794 + L1MA4 LINE L1 6094 6296 -4 1183 204 13 144 chr5 33479049 33479295 -166150855 + LTR37B LTR ERV1 9 151 -317 1742 197 44 33 chr5 33479295 33479656 -166150494 + MLT1A1 LTR MaLR 1 365 0 1183 204 13 144 chr5 33479656 33479938 -166150212 + LTR37B LTR ERV1 151 468 0 740 246 133 0 chr5 33480629 33480824 -166149326 - MIR SINE MIR -6 256 36 2330 160 6 9 chr5 33481551 33481889 -166148261 + MER1B DNA MER1_type 1 337 0 336 366 22 0 chr5 33482256 33482390 -166147760 - MIR SINE MIR -22 240 104 440 220 46 54 chr5 33482617 33482792 -166147358 + L1MC/D LINE L1 5517 5707 -514 264 30 0 0 chr5 33483561 33483594 -166146556 + (CA)n Simple_repeat Simple_repeat 1 33 0 2291 210 47 67 chr5 33483990 33484632 -166145518 + L1ME3A LINE L1 5506 6134 -36 559 297 54 5 chr5 33485641 33485826 -166144324 - MIR SINE MIR -27 235 42 225 394 14 7 chr5 33486782 33486924 -166143226 + MIR3 SINE MIR 2 144 -64 222 264 75 47 chr5 33487343 33487449 -166142701 + MIR SINE MIR 39 147 -115 1743 225 48 62 chr5 33487629 33487823 -166142327 + MER110 LTR ERV1 1 196 -295 2504 62 0 7 chr5 33487823 33488131 -166142019 - AluY SINE Alu -5 306 1 1743 225 48 62 chr5 33488131 33488434 -166141716 + MER110 LTR ERV1 196 491 0 715 283 11 11 chr5 33489046 33489226 -166140924 + MER5A DNA MER1_type 7 186 -3 389 269 81 42 chr5 33489226 33489385 -166140765 - MIR3 SINE MIR -22 186 14 1653 210 91 20 chr5 33489685 33490090 -166140060 - MER57B LTR ERV1 0 434 1 283 295 80 18 chr5 33490869 33490981 -166139169 + L2 LINE L2 2851 2969 -303 275 212 18 26 chr5 33492173 33492286 -166137864 + (TATATG)n Simple_repeat Simple_repeat 3 114 0 1262 264 20 7 chr5 33492435 33492738 -166137412 - MER93a LTR ERV1 -4 398 92 414 281 135 16 chr5 33493509 33493701 -166136449 + MIR SINE MIR 22 236 -26 1032 158 0 0 chr5 33493771 33493936 -166136214 - AluSg/x SINE Alu -8 304 140 559 246 14 14 chr5 33494529 33494671 -166135479 + MER117 DNA MER1_type 2 143 -54 262 316 21 11 chr5 33494689 33494784 -166135366 + MER117 DNA MER1_type 100 195 -2 390 243 102 83 chr5 33495326 33495759 -166134391 + L1ME4a LINE L1 5624 6064 -57 509 292 124 5 chr5 33495912 33496114 -166134036 + MIR SINE MIR 5 230 -32 307 284 120 33 chr5 33496405 33496588 -166133562 - MIR SINE MIR -51 211 13 423 0 0 0 chr5 33496588 33496635 -166133515 + (CA)n Simple_repeat Simple_repeat 2 48 0 289 215 0 15 chr5 33497706 33497771 -166132379 - MIR SINE MIR -112 150 87 796 186 14 0 chr5 33497807 33497947 -166132203 - MER5A DNA MER1_type -47 142 1 425 155 0 129 chr5 33497955 33498071 -166132079 - MER58 DNA MER1_type 0 2420 2320 499 237 10 0 chr5 33498085 33498182 -166131968 - MER58 DNA MER1_type -242 99 2 2247 111 0 16 chr5 33498636 33498952 -166131198 - AluSx SINE Alu -1 311 1 824 250 20 73 chr5 33499895 33499979 -166130171 - MER46C DNA MER2_type -1 337 250 1289 123 24 24 chr5 33499979 33500190 -166129960 + L1MB2 LINE L1 5960 6170 -1 824 250 20 73 chr5 33500190 33500451 -166129699 - MER46C DNA MER2_type -88 250 1 194 198 119 119 chr5 33500489 33500590 -166129560 - MIR SINE MIR -110 152 52 283 158 13 13 chr5 33501845 33501921 -166128229 + (CA)n Simple_repeat Simple_repeat 1 76 0 192 364 78 0 chr5 33501970 33502047 -166128103 + L3 LINE CR1 1027 1109 -468 240 271 0 0 chr5 33502047 33502095 -166128055 + (TG)n Simple_repeat Simple_repeat 1 48 0 378 254 100 23 chr5 33502635 33502765 -166127385 - MIR3 SINE MIR -54 154 15 329 200 0 0 chr5 33502941 33502996 -166127154 - MER45C DNA AcHobo 0 953 899 * 705 297 102 27 chr5 33502991 33503284 -166126866 - MER45C DNA AcHobo -320 633 319 1131 292 11 8 chr5 33503293 33503660 -166126490 - MER45C DNA AcHobo -585 368 1 1823 179 40 5 chr5 33503777 33504152 -166125998 - MLT1B LTR MaLR 0 390 3 2250 72 0 0 chr5 33504227 33504492 -166125658 - AluSc SINE Alu -21 288 24 297 246 96 36 chr5 33504535 33504702 -166125448 + L2 LINE L2 3081 3257 -56 180 0 0 0 chr5 33504920 33504940 -166125210 + (A)n Simple_repeat Simple_repeat 1 20 0 221 397 0 0 chr5 33505195 33505273 -166124877 - L2 LINE L2 0 3272 3195 234 91 0 0 chr5 33505330 33505363 -166124787 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 1084 227 138 37 chr5 33505383 33505811 -166124339 - L2 LINE L2 -34 3279 2809 345 82 0 0 chr5 33506275 33506324 -166123826 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 298 339 67 24 chr5 33506652 33506817 -166123333 - L2 LINE L2 -5 3267 3096 474 360 93 12 chr5 33506857 33507311 -166122839 - L2 LINE L2 -265 3007 2481 1416 194 23 48 chr5 33507397 33507707 -166122443 - AluJo SINE Alu -8 304 3 1216 215 20 81 chr5 33509254 33509663 -166120487 + MLT2C1 LTR ERVL 14 397 0 373 290 122 47 chr5 33509941 33510327 -166119823 + L1ME3 LINE L1 5425 5839 -323 304 315 11 0 chr5 33510484 33510573 -166119577 + L2 LINE L2 3224 3313 0 199 300 27 120 chr5 33511938 33512088 -166118062 + MIR3 SINE MIR 67 202 -6 476 266 191 11 chr5 33514989 33515177 -166114973 + MIR SINE MIR 13 234 -28 381 276 138 0 chr5 33515642 33515794 -166114356 + MIR SINE MIR 78 250 -12 2036 96 0 57 chr5 33517151 33517481 -166112669 + AluSq SINE Alu 1 313 0 415 223 43 36 chr5 33517605 33517744 -166112406 - L1ME3A LINE L1 -102 6068 5929 1116 205 0 0 chr5 33519438 33519643 -166110507 + MER3 DNA MER1_type 1 205 -4 514 288 55 0 chr5 33520311 33520474 -166109676 + MIR SINE MIR 79 250 -12 522 253 159 43 chr5 33520514 33520747 -166109403 + MIR SINE MIR 1 260 -2 419 291 64 25 chr5 33521937 33522133 -166108017 + MIR SINE MIR 16 223 -39 436 290 49 16 chr5 33522539 33522722 -166107428 - MER5A DNA MER1_type 0 189 1 390 42 0 0 chr5 33523470 33523518 -166106632 + (TG)n Simple_repeat Simple_repeat 1 48 0 2247 112 3 13 chr5 33524501 33524815 -166105335 + AluSx SINE Alu 1 311 -1 2424 80 0 0 chr5 33524817 33525128 -166105022 + AluY SINE Alu 1 311 0 2004 183 129 5 chr5 33525709 33526158 -166103992 + MLT1D LTR MaLR 1 505 0 392 209 127 51 chr5 33526244 33526402 -166103748 + MER112 DNA MER1_type 20 189 -71 237 291 139 35 chr5 33526459 33526631 -166103519 + MIR SINE MIR 58 247 -15 978 296 52 19 chr5 33526754 33527119 -166103031 - L3 LINE CR1 -124 1453 1077 403 236 146 26 chr5 33527681 33527990 -166102160 - L1MC4 LINE L1 -1 8041 7696 1383 202 107 3 chr5 33528648 33528984 -166101166 + L1MC3 LINE L1 7065 7435 -350 934 241 14 21 chr5 33528990 33529276 -166100874 + L1MC3 LINE L1 7502 7785 0 669 273 152 29 chr5 33529470 33529950 -166100200 + L1ME4a LINE L1 5581 6119 -2 248 312 7 52 chr5 33530330 33530484 -166099666 + GA-rich Low_complexity Low_complexity 3 149 0 1142 177 83 133 chr5 33531424 33531904 -166098246 + MLT1D LTR MaLR 3 458 -47 304 294 24 48 chr5 33532378 33532504 -166097646 + MIR SINE MIR 82 204 -58 465 180 0 0 chr5 33533369 33533458 -166096692 + CT-rich Low_complexity Low_complexity 2 90 0 428 256 0 0 chr5 33533491 33533577 -166096573 - AluJ/FLAM SINE Alu -224 88 3 354 301 0 65 chr5 33533679 33533802 -166096348 + L2 LINE L2 3193 3307 -6 21 57 0 0 chr5 33534114 33534149 -166096001 + AT_rich Low_complexity Low_complexity 1 35 0 629 166 48 0 chr5 33534170 33534315 -166095835 + L1MB3 LINE L1 6014 6165 -18 1495 164 24 95 chr5 33534409 33534745 -166095405 - AluJo SINE Alu 0 312 1 348 121 0 30 chr5 33536619 33536685 -166093465 - MADE1 DNA Mariner -13 67 4 331 283 47 9 chr5 33536741 33536847 -166093303 - L2 LINE L2 0 3313 3204 184 237 0 0 chr5 33536896 33536934 -166093216 - L2 LINE L2 -220 3052 3015 561 216 68 68 chr5 33537259 33537523 -166092627 + LTR37B LTR ERV1 203 466 -2 517 205 7 93 chr5 33537555 33537706 -166092444 + MER5A DNA MER1_type 52 189 0 1034 209 36 8 chr5 33538107 33538356 -166091794 + L1MA9 LINE L1 1 256 -6774 755 161 109 6 chr5 33538356 33538530 -166091620 + MLT1A1 LTR MaLR 1 192 -173 12789 175 33 15 chr5 33538534 33541773 -166088377 + L1MA9 LINE L1 3316 6634 -638 2390 103 3 0 chr5 33541773 33542074 -166088076 - AluSq SINE Alu -11 302 1 12789 175 33 15 chr5 33542074 33542719 -166087431 + L1MA9 LINE L1 6634 7266 -6 230 283 8 0 chr5 33543750 33543870 -166086280 + (TA)n Simple_repeat Simple_repeat 1 121 0 374 293 173 7 chr5 33543935 33544085 -166086065 - MER5A DNA MER1_type -1 188 14 2299 19 19 0 chr5 33544287 33544555 -166085595 - L1PA3 LINE L1 -3 6152 5880 348 329 39 13 chr5 33544672 33544827 -166085323 + L1MEc LINE L1 1806 1964 -4432 7809 248 56 13 chr5 33544845 33548029 -166082121 + L1MEc LINE L1 2048 5334 -881 258 176 0 0 chr5 33548029 33548080 -166082070 + (TG)n Simple_repeat Simple_repeat 1 51 0 2860 242 52 4 chr5 33548095 33548920 -166081230 + L1MB8 LINE L1 5313 6177 -1 189 219 0 0 chr5 33549021 33549053 -166081097 + MER5B DNA MER1_type 18 49 -129 288 304 49 10 chr5 33550466 33550568 -166079582 - L2 LINE L2 -14 3258 3153 253 171 14 14 chr5 33550985 33551055 -166079095 + GA-rich Low_complexity Low_complexity 5 74 0 612 264 83 47 chr5 33552507 33552860 -166077290 - L1MC5 LINE L1 -184 7777 7403 2416 83 0 13 chr5 33552860 33553173 -166076977 + AluSc SINE Alu 1 309 0 612 264 83 47 chr5 33553173 33553262 -166076888 - L1MC5 LINE L1 -558 7403 7319 285 109 0 0 chr5 33553370 33553416 -166076734 + (TA)n Simple_repeat Simple_repeat 2 47 0 285 289 35 28 chr5 33553456 33553598 -166076552 - L1MC4 LINE L1 -574 7468 7326 368 291 199 7 chr5 33553842 33553993 -166076157 + MIR3 SINE MIR 13 192 -16 2156 127 7 0 chr5 33554583 33554883 -166075267 - AluSx SINE Alu -10 302 1 429 272 53 18 chr5 33555350 33555464 -166074686 - MER91A DNA MER1_type -70 126 9 1898 264 67 10 chr5 33556272 33556964 -166073186 - L1PBa LINE L1 -6052 811 81 25 31 0 0 chr5 33557542 33557574 -166072576 + AT_rich Low_complexity Low_complexity 1 32 0 344 340 37 6 chr5 33559118 33559280 -166070870 + MLT1I LTR MaLR 40 206 -203 2012 153 66 34 chr5 33560803 33561022 -166069128 - MLT1B LTR MaLR 0 390 153 2330 105 3 0 chr5 33561022 33561326 -166068824 - AluSx SINE Alu -6 306 2 2012 153 66 34 chr5 33561326 33561484 -166068666 - MLT1B LTR MaLR -237 153 1 188 285 66 73 chr5 33562132 33562283 -166067867 + MIR SINE MIR 102 251 -11 391 253 11 0 chr5 33563323 33563410 -166066740 - MER63 DNA MER1_type 0 1060 973 1736 204 101 27 chr5 33563426 33563872 -166066278 + MLT1D LTR MaLR 27 505 0 604 134 52 0 chr5 33563872 33563967 -166066183 - MER63 DNA MER1_type -84 752 27 201 226 0 0 chr5 33564021 33564074 -166066076 + (ATATG)n Simple_repeat Simple_repeat 1 53 0 245 292 97 0 chr5 33564216 33564288 -166065862 - L2 LINE L2 0 3272 3194 2320 155 14 11 chr5 33564478 33564840 -166065310 + MLT1A1 LTR MaLR 1 363 -2 284 310 50 0 chr5 33565478 33565578 -166064572 - L2 LINE L2 0 3272 3168 2647 101 28 8 chr5 33566181 33566538 -166063612 - THE1B LTR MaLR 0 364 1 430 331 21 7 chr5 33566563 33566705 -166063445 + MIR SINE MIR 60 203 -59 336 227 39 70 chr5 33567021 33567149 -166063001 + MLT1H LTR MaLR 396 519 -30 25 31 0 0 chr5 33567849 33567881 -166062269 + AT_rich Low_complexity Low_complexity 1 32 0 970 179 12 30 chr5 33568331 33568499 -166061651 + FRAM SINE Alu 1 165 -1 22 35 0 0 chr5 33568661 33568690 -166061460 + AT_rich Low_complexity Low_complexity 1 29 0 487 331 105 26 chr5 33569386 33569806 -166060344 + L2 LINE L2 2510 2962 -352 282 254 0 0 chr5 33569812 33569871 -166060279 - MIR SINE MIR -64 144 86 771 278 31 18 chr5 33569931 33570154 -166059996 + MIR SINE MIR 23 248 -14 185 244 0 0 chr5 33570122 33570163 -166059987 + L2 LINE L2 3262 3302 -11 * 770 190 40 35 chr5 33570875 33571049 -166059101 + MER5B DNA MER1_type 1 175 -3 465 224 41 41 chr5 33571172 33571342 -166058808 - MER112 DNA MER1_type -90 170 1 364 317 34 14 chr5 33571342 33571497 -166058653 - MIR3 SINE MIR -48 160 1 497 197 180 0 chr5 33571731 33571885 -166058265 - MER5A DNA MER1_type 0 189 4 346 253 142 12 chr5 33572044 33572206 -166057944 - L1MEc LINE L1 -4925 1471 1289 362 241 190 55 chr5 33572208 33572445 -166057705 - L2 LINE L2 -101 3212 2944 1386 273 92 34 chr5 33573839 33574588 -166055562 - L2 LINE L2 -100 3213 2404 1704 173 3 14 chr5 33574588 33574877 -166055273 + AluJo SINE Alu 6 291 -21 1386 273 92 34 chr5 33574877 33574953 -166055197 - L2 LINE L2 -909 2404 2334 1711 268 24 16 chr5 33574968 33575468 -166054682 - L1ME3A LINE L1 -28 6142 5639 238 280 13 27 chr5 33575498 33575573 -166054577 + MLT1G1 LTR MaLR 248 321 -274 352 238 0 0 chr5 33575573 33575653 -166054497 + L1ME3A LINE L1 5881 5960 -210 670 227 39 84 chr5 33575711 33575997 -166054153 - L1ME3A LINE L1 -580 5584 5312 1420 248 109 80 chr5 33576002 33576540 -166053610 + MLT1G1 LTR MaLR 1 593 -2 1026 276 105 26 chr5 33576547 33577015 -166053135 - L1ME3A LINE L1 -840 5306 4802 1247 266 126 65 chr5 33577015 33577707 -166052443 - L2 LINE L2 -965 2349 1616 1314 223 33 50 chr5 33577807 33578171 -166051979 + MLT1A2 LTR MaLR 1 358 -16 1311 153 27 110 chr5 33578778 33579151 -166050999 - L1MA7 LINE L1 -22 6269 5928 1147 186 30 60 chr5 33580052 33580385 -166049765 - L1MC5 LINE L1 -30 7931 7609 255 229 0 14 chr5 33580416 33580486 -166049664 - L1MC/D LINE L1 -1911 5897 5829 4014 190 48 33 chr5 33580573 33582277 -166047873 - L1MA9 LINE L1 -30 6282 4547 396 331 41 0 chr5 33582633 33582754 -166047396 + MIR3 SINE MIR 66 191 -17 3252 96 20 0 chr5 33583271 33583709 -166046441 + L1PA13 LINE L1 5710 6156 -7 484 291 114 41 chr5 33583785 33584225 -166045925 - L1ME4a LINE L1 -171 5950 5479 363 248 203 33 chr5 33584922 33585075 -166045075 + MIR3 SINE MIR 15 193 -15 26 0 0 0 chr5 33585305 33585331 -166044819 + AT_rich Low_complexity Low_complexity 1 26 0 1854 162 6 16 chr5 33585384 33585699 -166044451 + AluJo SINE Alu 1 312 0 301 148 19 0 chr5 33585802 33585856 -166044294 - Charlie8 DNA MER1_type -1003 1414 1360 327 237 65 36 chr5 33585862 33586001 -166044149 - Charlie8 DNA MER1_type -1897 520 378 641 165 23 38 chr5 33586487 33586620 -166043530 + L1MA9 LINE L1 6182 6312 0 577 251 186 65 chr5 33587290 33587676 -166042474 + MLT1J2 LTR MaLR 1 433 -17 24 53 0 0 chr5 33588931 33588969 -166041181 + AT_rich Low_complexity Low_complexity 1 38 0 216 200 0 0 chr5 33589023 33589073 -166041077 + (TATG)n Simple_repeat Simple_repeat 1 50 0 311 285 62 62 chr5 33589073 33589217 -166040933 + L1MC4 LINE L1 6595 6738 -1304 410 215 30 22 chr5 33590009 33590110 -166040040 + MIR SINE MIR 93 189 -65 1048 209 52 14 chr5 33590123 33590334 -166039816 + MER58A DNA MER1_type 6 224 0 2046 228 82 37 chr5 33591579 33592175 -166037975 + MLT1E3 LTR MaLR 1 623 -1 405 0 0 0 chr5 33592311 33592356 -166037794 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 687 305 109 28 chr5 33592460 33593013 -166037137 - L1ME LINE L1 -314 5856 5254 378 311 55 19 chr5 33593054 33593311 -166036839 - L1ME LINE L1 -978 5168 4903 1799 162 0 11 chr5 33595098 33595382 -166034768 + AluJo SINE Alu 1 281 -31 670 261 72 9 chr5 33595760 33595982 -166034168 - MIR SINE MIR -26 236 1 225 232 42 74 chr5 33596837 33596932 -166033218 + MIR SINE MIR 60 151 -57 558 251 162 22 chr5 33598308 33598496 -166031654 + L1ME4a LINE L1 5761 5921 -200 2009 132 53 71 chr5 33598496 33598890 -166031260 - MLT1B LTR MaLR -3 387 1 558 251 162 22 chr5 33598890 33599016 -166031134 + L1ME4a LINE L1 5921 6119 -2 431 259 193 0 chr5 33599621 33599809 -166030341 - MIR SINE MIR -21 241 20 200 180 180 33 chr5 33599804 33599865 -166030285 + L2 LINE L2 3144 3213 -59 * 293 317 32 32 chr5 33599967 33600002 -166030148 - MIR SINE MIR -76 186 152 2339 168 6 3 chr5 33600002 33600366 -166029784 - MLT1A1 LTR MaLR 0 365 1 293 317 32 32 chr5 33600366 33600453 -166029697 - MIR SINE MIR -109 153 64 279 0 0 0 chr5 33600508 33600539 -166029611 + (TC)n Simple_repeat Simple_repeat 2 32 0 201 300 98 71 chr5 33601297 33601489 -166028661 - L2 LINE L2 -337 2977 2771 867 173 0 0 chr5 33601489 33601622 -166028528 - FLAM_C SINE Alu 0 133 1 201 300 98 71 chr5 33601622 33601766 -166028384 - L2 LINE L2 -543 2771 2632 367 93 0 0 chr5 33601814 33601868 -166028282 + MADE1 DNA Mariner 27 80 0 2138 133 3 0 chr5 33602976 33603276 -166026874 + AluSx SINE Alu 1 301 -11 255 261 8 50 chr5 33603287 33603406 -166026744 + GA-rich Low_complexity Low_complexity 5 118 0 316 310 0 0 chr5 33603746 33603846 -166026304 + MIR SINE MIR 82 181 -81 601 270 50 5 chr5 33604973 33605195 -166024955 + MIR SINE MIR 6 237 -25 924 70 78 0 chr5 33606121 33606250 -166023900 - MER85 DNA T2_type 0 139 1 339 281 86 16 chr5 33608107 33608235 -166021915 + L1MD3 LINE L1 6444 6580 -1415 586 206 0 0 chr5 33608236 33608333 -166021817 - Tigger7 DNA MER2_type 0 2487 2391 964 184 163 34 chr5 33608334 33608473 -166021677 - Tigger7 DNA MER2_type -468 265 145 7960 77 21 9 chr5 33608473 33609532 -166020618 + MER11C LTR ERVK 1 1071 0 964 184 163 34 chr5 33609532 33609625 -166020525 - Tigger7 DNA MER2_type -588 145 3 1406 206 48 93 chr5 33609628 33610152 -166019998 + L1MC4 LINE L1 6590 7089 -953 872 240 31 9 chr5 33610157 33610382 -166019768 + L1MC4a LINE L1 7163 7392 -416 1035 179 113 69 chr5 33610393 33610667 -166019483 - MSTB1 LTR MaLR -146 286 1 857 179 7 0 chr5 33610669 33610820 -166019330 + L1MC4 LINE L1 7475 7626 -416 2503 83 0 0 chr5 33611917 33612229 -166017921 + AluSp SINE Alu 1 312 -1 2077 134 0 10 chr5 33612509 33612807 -166017343 + AluSx SINE Alu 1 295 -17 2648 91 0 0 chr5 33662990 33663343 -165966807 + L1PA7 LINE L1 4719 5071 -1075 7115 55 6 8 chr5 33663343 33664214 -165965936 + L1PA7 LINE L1 5283 6154 0 8425 169 22 14 chr5 33664217 33666832 -165963318 + L1PB3 LINE L1 3521 6152 -2 224 29 0 29 chr5 33666833 33666867 -165963283 + (CA)n Simple_repeat Simple_repeat 2 34 0 227 266 9 18 chr5 33666900 33667009 -165963141 - L1M4 LINE L1 -3476 2670 2563 2278 137 134 11 chr5 33667034 33667415 -165962735 + MSTA LTR MaLR 1 428 0 5976 180 23 28 chr5 33667415 33667908 -165962242 + MSTA-int LTR MaLR 1 495 -1156 1162 146 151 0 chr5 33667908 33668107 -165962043 - MER30 DNA MER1_type 0 230 2 5976 180 23 28 chr5 33668107 33668723 -165961427 + MSTA-int LTR MaLR 495 1105 -546 5522 115 44 26 chr5 33668723 33669724 -165960426 - MER11B LTR ERVK -88 1148 1 659 140 9 9 chr5 33669732 33669846 -165960304 + MSTA-int LTR MaLR 1538 1651 0 2309 154 115 5 chr5 33669846 33670230 -165959920 + MSTA LTR MaLR 1 426 -2 1914 214 21 32 chr5 33670256 33670783 -165959367 + L1M4 LINE L1 3333 3853 -2293 4848 234 37 49 chr5 33670794 33671028 -165959122 + L1MC1 LINE L1 3077 3312 -3021 285 196 0 0 chr5 33671028 33671079 -165959071 + MSTA LTR MaLR 371 421 -7 4848 234 37 49 chr5 33671079 33671481 -165958669 + L1MC1 LINE L1 3312 3717 -2616 2401 96 0 10 chr5 33671481 33671794 -165958356 + AluSg SINE Alu 1 310 0 4848 234 37 49 chr5 33671794 33674045 -165956105 + L1MC1 LINE L1 3717 5846 -487 2003 129 0 0 chr5 33674052 33674323 -165955827 + AluSc SINE Alu 1 271 -38 2607 150 33 7 chr5 33674423 33674849 -165955301 + L1MC1 LINE L1 5897 6333 0 3763 219 61 58 chr5 33674849 33676029 -165954121 + L1M4 LINE L1 3843 5025 -1121 1290 185 20 16 chr5 33676034 33676283 -165953867 + L1MD1 LINE L1 5993 6242 0 243 150 62 113 chr5 33677937 33678017 -165952133 - MER5B DNA MER1_type 0 178 103 622 269 0 28 chr5 33678040 33678222 -165951928 + MER5B DNA MER1_type 1 177 -1 540 227 0 133 chr5 33678231 33678292 -165951858 - MER5A DNA MER1_type 0 189 122 1165 191 30 4 chr5 33678292 33678522 -165951628 + L1MB8 LINE L1 5933 6168 -10 540 227 0 133 chr5 33678522 33678663 -165951487 - MER5A DNA MER1_type -67 122 14 989 245 19 5 chr5 33679694 33679910 -165950240 - MER58A DNA MER1_type -5 219 1 474 193 12 0 chr5 33679910 33679993 -165950157 - MIR SINE MIR -91 171 88 2006 127 0 36 chr5 33680956 33681264 -165948886 - AluSp SINE Alu -16 297 1 1957 103 4 8 chr5 33681951 33682244 -165947906 - AluSp SINE Alu 0 313 38 240 143 0 0 chr5 33682686 33682742 -165947408 + (T)n Simple_repeat Simple_repeat 1 56 0 789 103 0 0 chr5 33684779 33684886 -165945264 + AluY SINE Alu 205 311 0 419 256 108 0 chr5 33685679 33685808 -165944342 - MIR SINE MIR 0 262 120 405 308 7 20 chr5 33686202 33686348 -165943802 + MIR SINE MIR 119 262 0 1991 110 38 10 chr5 33687141 33687431 -165942719 - AluSx SINE Alu -14 298 1 767 90 0 0 chr5 33687449 33687549 -165942601 - U6 snRNA snRNA -6 101 2 193 269 51 39 chr5 33688374 33688452 -165941698 - L3 LINE CR1 -15 1562 1484 833 177 0 15 chr5 33688555 33688685 -165941465 + FLAM_C SINE Alu 2 129 -14 2120 123 3 0 chr5 33689059 33689352 -165940798 + AluSx SINE Alu 1 294 -18 255 189 0 0 chr5 33690070 33690123 -165940027 + (TG)n Simple_repeat Simple_repeat 2 54 0 309 288 147 40 chr5 33690135 33690312 -165939838 + MIR SINE MIR 5 200 -62 1713 191 84 31 chr5 33692568 33692986 -165937164 - MLT1D LTR MaLR -5 500 61 363 228 52 7 chr5 33693143 33693279 -165936871 + CT-rich Low_complexity Low_complexity 3 144 0 312 319 98 34 chr5 33693396 33693662 -165936488 + L2 LINE L2 689 971 -2343 734 294 20 0 chr5 33694199 33694400 -165935750 - MIR SINE MIR 0 262 58 2439 264 124 25 chr5 33695610 33696792 -165933358 - L2 LINE L2 -4 3309 2004 1564 161 29 127 chr5 33697303 33697689 -165932461 - Tigger3(Golem) DNA MER2_type 0 3029 1 1033 250 66 28 chr5 33697721 33698113 -165932037 - L1ME1 LINE L1 -5 6161 5755 1818 170 0 20 chr5 33698320 33698620 -165931530 + AluJo SINE Alu 1 294 -18 1670 179 24 14 chr5 33700026 33700323 -165929827 + AluJb SINE Alu 1 300 -12 907 153 0 15 chr5 33700342 33700479 -165929671 + AluJo SINE Alu 1 135 -177 4092 256 55 47 chr5 33700686 33702319 -165927831 + L1ME2 LINE L1 36 1681 -4715 4466 198 100 8 chr5 33702347 33703541 -165926609 - L1PBa LINE L1 -5410 1453 6 605 251 29 6 chr5 33703546 33703717 -165926433 + L1ME2 LINE L1 4899 5073 -1142 2206 129 0 0 chr5 33703718 33704020 -165926130 + AluSq SINE Alu 1 302 -11 2639 198 34 17 chr5 33704192 33704302 -165925848 + L1ME2 LINE L1 5162 5269 -966 2331 121 0 0 chr5 33704302 33704609 -165925541 + AluSg SINE Alu 1 307 -3 195 42 0 0 chr5 33704609 33704633 -165925517 + (GGGGA)n Simple_repeat Simple_repeat 5 28 0 2639 198 34 17 chr5 33704633 33705249 -165924901 + L1ME2 LINE L1 5268 5895 -340 4310 82 29 42 chr5 33705249 33706291 -165923859 + MER11A LTR ERVK 1 1266 0 400 219 79 112 chr5 33706295 33706510 -165923640 + L1ME2 LINE L1 5903 6110 -123 691 125 0 0 chr5 33706790 33706894 -165923256 - L1M2 LINE L1 -866 5434 5331 3660 159 16 22 chr5 33706895 33707580 -165922570 + L1MA8 LINE L1 5609 6289 -2 453 305 20 13 chr5 33707922 33708073 -165922077 + MER5B DNA MER1_type 1 152 -26 939 182 39 0 chr5 33708375 33708556 -165921594 - MER5A DNA MER1_type 0 189 2 1543 266 23 10 chr5 33710112 33710597 -165919553 - L1M4 LINE L1 -3000 3146 2656 238 195 171 12 chr5 33710788 33710870 -165919280 + MLT1F1 LTR MaLR 1 95 -559 1133 257 169 38 chr5 33710881 33711325 -165918825 + MLT1F1 LTR MaLR 66 567 0 279 348 66 23 chr5 33711334 33711667 -165918483 - L2 LINE L2 -743 2571 2163 220 298 48 0 chr5 33711601 33711685 -165918465 + MIR SINE MIR 134 221 -41 * 1225 235 35 65 chr5 33711701 33711949 -165918201 + MLT1B LTR MaLR 1 234 -156 2630 153 19 0 chr5 33711949 33712367 -165917783 - MSTB LTR MaLR 0 426 1 1225 235 35 65 chr5 33712367 33712518 -165917632 + MLT1B LTR MaLR 234 388 -2 4310 100 5 8 chr5 33713192 33713810 -165916340 - L1PB1 LINE L1 0 6151 5536 458 228 14 35 chr5 33713844 33713989 -165916161 - L1 LINE L1 -2593 4269 4128 3299 149 33 4 chr5 33714091 33714912 -165915238 - L1PA7 LINE L1 -271 5883 2986 2524 125 11 3 chr5 33714913 33715274 -165914876 + THE1B LTR MaLR 1 364 0 2036 77 4 7 chr5 33715274 33715547 -165914603 + THE1B-int LTR MaLR 1 272 -1308 2211 68 0 0 chr5 33715559 33715838 -165914312 + THE1B-int LTR MaLR 1302 1580 0 2597 100 14 8 chr5 33715840 33716200 -165913950 + THE1B LTR MaLR 3 364 0 16010 130 47 46 chr5 33716200 33719900 -165910250 - L1PBa LINE L1 -3157 3705 1 257 35 0 0 chr5 33720847 33720876 -165909274 + U2 snRNA snRNA 5 33 -155 639 333 87 30 chr5 33721290 33721740 -165908410 + L2 LINE L2 2248 2734 -580 1372 284 30 40 chr5 33721740 33722236 -165907914 - LTR16C LTR ERVL 0 491 1 639 333 87 30 chr5 33722236 33722314 -165907836 + L2 LINE L2 2734 2806 -508 799 294 8 32 chr5 33722519 33722767 -165907383 - MLT2F LTR ERVL -234 429 188 4323 287 59 24 chr5 33722807 33724357 -165905793 - ERVL LTR ERVL -3385 2379 775 859 276 105 20 chr5 33724364 33724803 -165905347 + HAL1 LINE L1 1933 2408 -99 279 256 60 17 chr5 33724815 33724932 -165905218 - MER5B DNA MER1_type -37 141 20 21 0 0 0 chr5 33724966 33724987 -165905163 + AT_rich Low_complexity Low_complexity 1 21 0 2283 112 3 3 chr5 33725358 33725670 -165904480 - AluSx SINE Alu 0 312 1 215 320 83 51 chr5 33725679 33725835 -165904315 - L2 LINE L2 -210 3062 2902 2191 100 0 0 chr5 33725921 33726254 -165903896 + AluSg SINE Alu 1 333 0 2105 116 3 7 chr5 33726548 33726842 -165903308 + AluSc SINE Alu 1 293 -16 3226 173 18 71 chr5 33727016 33727746 -165902404 - LTR8 LTR ERV1 0 691 1 335 316 30 42 chr5 33727977 33728145 -165902005 - MER5A DNA MER1_type 0 189 24 226 200 0 0 chr5 33728172 33728212 -165901938 - MIR SINE MIR -56 152 113 4905 73 26 3 chr5 33728217 33728862 -165901288 - PABL_A LTR ERV1 0 660 1 849 159 49 102 chr5 33729640 33729866 -165900284 + MER20 DNA MER1_type 1 214 -5 263 247 71 91 chr5 33730182 33730336 -165899814 + L2 LINE L2 1873 2023 -1291 506 156 89 0 chr5 33730338 33730428 -165899722 + MER4A LTR ERV1 1 98 -566 1827 117 11 80 chr5 33730428 33730802 -165899348 + MER4A LTR ERV1 261 664 0 675 326 138 26 chr5 33730961 33731703 -165898447 + L2 LINE L2 2153 2977 -337 2032 158 0 0 chr5 33732015 33732313 -165897837 - AluSx SINE Alu -14 298 1 208 321 0 0 chr5 33732367 33732420 -165897730 + L2 LINE L2 3196 3248 -24 898 250 10 0 chr5 33732500 33732700 -165897450 - MLT1D LTR MaLR -5 500 299 399 190 30 80 chr5 33732696 33732796 -165897354 - MLT1D LTR MaLR -409 96 2 * 183 366 141 0 chr5 33732861 33733003 -165897147 + MIR3 SINE MIR 19 180 -28 810 108 7 20 chr5 33734147 33734295 -165895855 + (TTTC)n Simple_repeat Simple_repeat 3 148 0 22 35 0 0 chr5 33737229 33737258 -165892892 + GC_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr5 33738436 33738461 -165891689 + AT_rich Low_complexity Low_complexity 1 25 0 262 332 62 62 chr5 33739863 33740107 -165890043 - L2 LINE L2 -10 3262 3019 180 0 0 0 chr5 33740490 33740510 -165889640 + (TG)n Simple_repeat Simple_repeat 1 20 0 777 306 74 46 chr5 33741583 33742018 -165888132 + MER115 DNA AcHobo 4 450 -243 540 250 172 16 chr5 33742075 33742267 -165887883 + MIR SINE MIR 35 256 -6 1703 187 0 10 chr5 33742287 33742581 -165887569 - AluJb SINE Alu -18 294 4 296 271 187 13 chr5 33742599 33742754 -165887396 - MIR SINE MIR -75 187 6 200 221 94 102 chr5 33742759 33742886 -165887264 + L3 LINE CR1 1155 1280 -297 2367 97 0 0 chr5 33743385 33743683 -165886467 + AluY SINE Alu 1 298 -13 734 214 91 16 chr5 33744121 33744308 -165885842 - MER58B DNA MER1_type -4 337 137 716 169 14 14 chr5 33744334 33744476 -165885674 - MER58B DNA MER1_type -163 178 37 247 284 135 34 chr5 33744818 33744966 -165885184 - MIR SINE MIR 0 262 100 304 270 143 36 chr5 33744966 33745162 -165884988 + L1MC4a LINE L1 5851 6067 -1741 242 258 0 2 chr5 33745248 33745317 -165884833 - MIR SINE MIR -102 106 40 182 313 45 0 chr5 33746042 33746109 -165884041 + MIR SINE MIR 82 151 -111 180 0 0 0 chr5 33746166 33746186 -165883964 + (GGCTG)n Simple_repeat Simple_repeat 5 24 0 425 295 26 47 chr5 33747170 33747363 -165882787 + MIR SINE MIR 60 248 -14 291 278 21 62 chr5 33748552 33748696 -165881454 - L2 LINE L2 -236 3036 2899 1634 184 23 29 chr5 33749095 33749404 -165880746 + AluJo SINE Alu 1 307 -5 180 246 49 16 chr5 33749446 33749507 -165880643 + MIR3 SINE MIR 141 203 -5 298 270 34 11 chr5 33750307 33750396 -165879754 - L3 LINE CR1 -810 767 677 215 287 58 11 chr5 33751210 33751297 -165878853 + L2 LINE L2 2945 3035 -237 698 221 13 19 chr5 33751321 33751479 -165878671 - FRAM SINE Alu -19 157 1 7437 8 0 1 chr5 33751882 33752703 -165877447 - L1HS LINE L1 0 6155 5336 5257 32 0 0 chr5 33752702 33753326 -165876824 + L1P LINE L1 1941 2564 -3582 * 2418 184 68 55 chr5 33754097 33754689 -165875461 + MLT1E2 LTR MaLR 28 626 0 273 29 0 0 chr5 33754832 33754866 -165875284 + (CA)n Simple_repeat Simple_repeat 2 35 0 8869 121 8 5 chr5 33754866 33756158 -165873992 + HSMAR2 DNA Mariner 6 1301 -1 797 253 0 0 chr5 33757695 33757865 -165872285 - FRAM SINE Alu -1 175 6 322 279 241 19 chr5 33758264 33758526 -165871624 - L1ME4a LINE L1 -28 6093 5774 296 65 152 0 chr5 33759244 33759290 -165870860 + L1MC3 LINE L1 7519 7571 -214 * 1143 110 58 0 chr5 33759288 33759461 -165870689 - L1P5 LINE L1 -507 5644 5462 753 141 16 0 chr5 33759475 33759596 -165870554 - L1PB1 LINE L1 -360 5791 5669 748 92 5 118 chr5 33759588 33759783 -165870367 + L1PB1 LINE L1 5784 5956 -195 * 801 165 24 58 chr5 33760069 33760275 -165869875 + L1MD3 LINE L1 7765 7963 -32 207 286 143 0 chr5 33760329 33760427 -165869723 + L2 LINE L2 3201 3312 -1 260 322 98 53 chr5 33760797 33760969 -165869181 + L2 LINE L2 2935 3098 -174 1573 254 18 78 chr5 33760969 33761458 -165868692 + LTR16B LTR ERVL 5 464 0 260 322 98 53 chr5 33761458 33761644 -165868506 + L2 LINE L2 3098 3270 -2 272 256 206 38 chr5 33761893 33762053 -165868097 - MIR SINE MIR -24 238 52 898 226 51 0 chr5 33762253 33762448 -165867702 + MER3 DNA MER1_type 1 205 -4 392 239 263 34 chr5 33763448 33763653 -165866497 + MIR SINE MIR 2 253 -9 385 174 20 92 chr5 33765117 33765215 -165864935 - MER20 DNA MER1_type -128 91 1 1549 12 0 0 chr5 33765725 33765894 -165864256 - AluYb8 SINE Alu -4 314 146 518 261 150 7 chr5 33766658 33766811 -165863339 - MER5A DNA MER1_type -6 183 9 297 0 0 0 chr5 33767083 33767116 -165863034 + (CA)n Simple_repeat Simple_repeat 2 34 0 198 0 0 0 chr5 33768332 33768354 -165861796 + (TC)n Simple_repeat Simple_repeat 2 23 0 * 360 0 0 0 chr5 33768353 33768393 -165861757 + (TG)n Simple_repeat Simple_repeat 1 40 0 415 284 18 0 chr5 33768406 33768515 -165861635 - L2 LINE L2 0 3313 3203 35 0 0 0 chr5 33768571 33768606 -165861544 + AT_rich Low_complexity Low_complexity 1 35 0 309 333 37 0 chr5 33769711 33769819 -165860331 + LTR16C LTR ERVL 376 487 -4 399 113 0 0 chr5 33769835 33769897 -165860253 + (TTGG)n Simple_repeat Simple_repeat 2 63 0 370 266 9 37 chr5 33769902 33770011 -165860139 + MIR3 SINE MIR 61 166 -42 * 433 291 34 27 chr5 33770002 33770150 -165860000 - L2 LINE L2 -4 3309 3161 1346 150 89 112 chr5 33770732 33770928 -165859222 - AluJb SINE Alu -5 307 119 2166 128 3 0 chr5 33770928 33771225 -165858925 - AluSx SINE Alu -12 300 3 1346 150 89 112 chr5 33771225 33771342 -165858808 - AluJb SINE Alu -193 119 1 228 311 0 0 chr5 33774948 33775009 -165855141 + MLT1L LTR MaLR 19 79 -536 271 339 63 24 chr5 33775065 33775192 -165854958 + MLT1L LTR MaLR 198 329 -286 280 189 84 42 chr5 33775360 33775455 -165854695 + MLT1J LTR MaLR 405 503 -8 1533 208 53 45 chr5 33776230 33776610 -165853540 + MLT1B LTR MaLR 3 385 -5 296 264 57 28 chr5 33776937 33777043 -165853107 - L2 LINE L2 -1 3312 3204 300 365 33 40 chr5 33777064 33777320 -165852830 - L2 LINE L2 -439 2875 2620 5660 129 48 9 chr5 33777320 33778189 -165851961 + MER4D LTR ERV1 1 903 0 300 365 33 40 chr5 33778189 33778236 -165851914 - L2 LINE L2 -694 2620 2574 5236 142 69 9 chr5 33778330 33779182 -165850968 - MER4D LTR ERV1 0 903 1 242 206 136 141 chr5 33779446 33779525 -165850625 + MIR SINE MIR 52 130 -132 824 252 19 19 chr5 33779525 33779735 -165850415 + MER63A DNA MER1_type 1 210 0 242 206 136 141 chr5 33779735 33779839 -165850311 + MIR SINE MIR 130 234 -28 713 267 35 110 chr5 33779876 33780396 -165849754 - L2 LINE L2 -16 3297 2817 467 258 13 63 chr5 33781083 33781242 -165848908 + MER5A DNA MER1_type 39 189 0 1059 168 56 22 chr5 33781883 33782115 -165848035 + L1MB7 LINE L1 5929 6168 -16 685 207 43 37 chr5 33782267 33782455 -165847695 - MER5A DNA MER1_type 0 189 1 231 259 94 12 chr5 33782493 33782578 -165847572 - L1ME LINE L1 -297 5824 5733 472 306 59 11 chr5 33785606 33785792 -165844358 + L2 LINE L2 3115 3309 -4 641 250 83 36 chr5 33785829 33786021 -165844129 + LTR33A LTR ERVL 1 201 -322 617 222 98 15 chr5 33786055 33786258 -165843892 + LTR33A LTR ERVL 292 511 -12 1353 178 8 23 chr5 33786312 33786571 -165843579 - AluJo SINE Alu -12 300 46 232 356 35 23 chr5 33786604 33786691 -165843459 + MIR SINE MIR 13 100 -162 2366 212 46 22 chr5 33786706 33787254 -165842896 + MER119 DNA MER1_type 7 567 -16 201 237 0 0 chr5 33787255 33787293 -165842857 + MIR SINE MIR 109 146 -62 235 326 53 0 chr5 33787504 33787599 -165842551 + MLT1L LTR MaLR 166 265 -350 23 33 0 0 chr5 33789172 33789202 -165840948 + AT_rich Low_complexity Low_complexity 1 30 0 666 147 18 9 chr5 33789320 33789429 -165840721 + FLAM_A SINE Alu 1 110 -32 245 29 29 0 chr5 33789432 33789466 -165840684 + (TCCA)n Simple_repeat Simple_repeat 4 38 0 813 100 0 0 chr5 33791021 33791163 -165838987 - AluY SINE Alu 0 316 175 2109 92 0 7 chr5 33791167 33791476 -165838674 - AluSg SINE Alu 0 307 1 333 306 28 39 chr5 33791482 33791662 -165838488 + L1MC4a LINE L1 5707 5884 -1924 44 0 0 0 chr5 33791662 33791706 -165838444 + AT_rich Low_complexity Low_complexity 1 44 0 1867 156 0 7 chr5 33791724 33792019 -165838131 + AluJb SINE Alu 2 294 -18 3932 164 21 26 chr5 33792188 33792906 -165837244 - L1MB3 LINE L1 -2 6181 5468 2078 97 0 4 chr5 33792912 33793181 -165836969 + AluSx SINE Alu 1 268 -44 2133 106 7 0 chr5 33793490 33793774 -165836376 - AluSx SINE Alu -26 286 1 4506 152 22 27 chr5 33794245 33794982 -165835168 + MER44D DNA MER2_type 1 605 0 3469 183 139 61 chr5 33795029 33795800 -165834350 + L1M4 LINE L1 14 876 -5666 1740 171 3 37 chr5 33795800 33796121 -165834029 + AluJo SINE Alu 1 310 -2 3469 183 139 61 chr5 33796121 33796315 -165833835 + L1M4 LINE L1 876 1054 -5488 228 219 55 82 chr5 33796838 33796911 -165833239 + L1PBa LINE L1 1339 1409 -5454 362 188 78 5 chr5 33798399 33798506 -165831644 + L1MC5 LINE L1 7813 8042 0 207 204 0 0 chr5 33799227 33799271 -165830879 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 1154 123 25 0 chr5 33799818 33799981 -165830169 - AluSg/x SINE Alu -18 294 128 2265 140 31 58 chr5 33800512 33800926 -165829224 - MER57A LTR ERV1 0 403 1 252 136 45 0 chr5 33800982 33801026 -165829124 + LTR65 LTR ERV1 344 389 -280 2091 122 3 3 chr5 33801317 33801611 -165828539 - AluSx SINE Alu -18 294 1 209 246 237 37 chr5 33802303 33802652 -165827498 + L2 LINE L2 1876 2369 -945 1055 189 56 36 chr5 33802666 33802915 -165827235 - MIR SINE MIR -1 261 8 242 346 149 14 chr5 33802950 33803158 -165826992 + L2 LINE L2 2440 2675 -639 238 235 147 0 chr5 33803214 33803282 -165826868 + MIR SINE MIR 63 140 -122 279 57 0 0 chr5 33803598 33803633 -165826517 - MADE1 DNA Mariner -45 35 1 189 152 0 0 chr5 33806055 33806088 -165824062 + MIR SINE MIR 174 206 -56 182 208 83 0 chr5 33806109 33806157 -165823993 - L2 LINE L2 0 3272 3221 198 308 202 43 chr5 33806162 33806558 -165823592 - L2 LINE L2 -601 2713 2255 374 262 119 122 chr5 33807077 33807546 -165822604 + L1M2 LINE L1 677 1144 -5705 3811 139 26 3 chr5 33808360 33809376 -165820774 + L1MA4A LINE L1 4616 5656 -644 2765 52 0 39 chr5 33809376 33809758 -165820392 - MER11A LTR ERVK 0 1266 900 3586 139 62 21 chr5 33809758 33810208 -165819942 + L1MA4A LINE L1 5657 6141 -162 1404 205 10 44 chr5 33810208 33810343 -165819807 + AluJo SINE Alu 1 139 -186 1530 102 0 0 chr5 33810343 33810539 -165819611 + AluSg/x SINE Alu 100 295 -17 1404 205 10 44 chr5 33810539 33810738 -165819412 + AluJo SINE Alu 139 325 0 3586 139 62 21 chr5 33810738 33810903 -165819247 + L1MA4A LINE L1 6141 6298 -5 1675 142 81 72 chr5 33810909 33811268 -165818882 + MLT1B LTR MaLR 27 388 -2 2041 130 30 0 chr5 33811676 33811977 -165818173 + AluSx SINE Alu 1 310 -2 527 220 193 62 chr5 33812439 33812800 -165817350 + L1MC5 LINE L1 6906 7244 -717 1778 156 74 52 chr5 33812808 33813079 -165817071 - MLT1A2 LTR MaLR 0 374 91 2324 116 35 27 chr5 33813079 33813451 -165816699 - THE1C LTR MaLR 0 375 1 1778 156 74 52 chr5 33813451 33813545 -165816605 - MLT1A2 LTR MaLR -283 91 1 287 267 133 13 chr5 33813551 33813701 -165816449 + L1MC4 LINE L1 7328 7495 -547 * 311 205 150 24 chr5 33813675 33813802 -165816348 + L1MC5 LINE L1 7303 7445 -516 432 238 38 38 chr5 33813805 33813990 -165816160 + L1MC5 LINE L1 7492 7676 -285 594 171 0 0 chr5 33814042 33814130 -165816020 - AluJ/FLAM SINE Alu -223 89 2 652 256 32 127 chr5 33814197 33814600 -165815550 + MLT1E-int LTR MaLR 1003 1367 -4 2030 256 71 14 chr5 33814612 33815162 -165814988 + MLT1E LTR MaLR 13 593 0 411 258 33 8 chr5 33815162 33815282 -165814868 - MIR SINE MIR -62 200 78 429 258 68 94 chr5 33815577 33816034 -165814116 + MER65A LTR ERV1 1 445 0 553 264 155 47 chr5 33816417 33816479 -165813671 + L1ME4a LINE L1 5519 5573 -548 2133 216 81 49 chr5 33816479 33817095 -165813055 + MER92B LTR ERV1 1 636 0 553 264 155 47 chr5 33817095 33817548 -165812602 + L1ME4a LINE L1 5573 6090 -31 34 0 0 0 chr5 33817549 33817583 -165812567 + AT_rich Low_complexity Low_complexity 1 34 0 2061 116 10 3 chr5 33818156 33818450 -165811700 + AluSq SINE Alu 1 296 -17 292 237 64 77 chr5 33820320 33820476 -165809674 + MLT1J1 LTR MaLR 289 442 -4 2936 75 0 11 chr5 33820886 33821257 -165808893 + L1PA8 LINE L1 5806 6172 0 298 198 107 66 chr5 33821924 33822045 -165808105 + MLT1J1 LTR MaLR 4 129 -317 242 29 29 0 chr5 33822139 33822174 -165807976 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2498 55 0 0 chr5 33822176 33822467 -165807683 - AluY SINE Alu -20 291 1 291 114 0 0 chr5 33825769 33825813 -165804337 + (A)n Simple_repeat Simple_repeat 1 44 0 610 277 96 36 chr5 33826265 33826732 -165803418 + L1MC4a LINE L1 5385 5822 -2173 1661 162 17 30 chr5 33826732 33827034 -165803116 + AluSx SINE Alu 6 303 -9 610 277 96 36 chr5 33827034 33827282 -165802868 + L1MC4a LINE L1 5822 7988 -7 2390 65 0 0 chr5 33827289 33827581 -165802569 - AluY SINE Alu -19 292 1 288 212 0 0 chr5 33827939 33828005 -165802145 + CT-rich Low_complexity Low_complexity 4 69 0 245 238 89 10 chr5 33828273 33828374 -165801776 + L1ME LINE L1 5709 5817 -304 269 208 69 0 chr5 33828510 33828582 -165801568 - MER103 DNA DNA -63 103 27 995 128 0 0 chr5 33828616 33828749 -165801401 - FLAM_C SINE Alu 0 133 1 3628 70 2 0 chr5 33829957 33830426 -165799724 + L1PA13 LINE L1 5708 6177 0 1818 119 11 8 chr5 33830860 33831120 -165799030 + AluSx SINE Alu 1 261 -51 185 293 17 0 chr5 33831205 33831263 -165798887 - MIR SINE MIR -66 142 84 1949 150 3 10 chr5 33831821 33832121 -165798029 + AluSx SINE Alu 1 298 -14 516 275 89 44 chr5 33832985 33833189 -165796961 + L1ME4a LINE L1 5672 5866 -255 1609 204 0 17 chr5 33833189 33833488 -165796662 + AluJb SINE Alu 1 294 -18 516 275 89 44 chr5 33833488 33833712 -165796438 + L1ME4a LINE L1 5866 6119 -2 889 179 46 15 chr5 33835669 33835865 -165794285 - L1MA8 LINE L1 -7 6284 6083 2255 102 0 3 chr5 33835979 33836274 -165793876 + AluSx SINE Alu 1 294 -18 216 317 24 0 chr5 33836597 33836679 -165793471 + GA-rich Low_complexity Low_complexity 1 84 0 290 278 103 10 chr5 33837485 33837582 -165792568 + MER39 LTR ERV1 1 106 -601 1597 173 108 6 chr5 33837774 33838109 -165792041 + LTR48 LTR ERV1 84 452 -335 4238 136 33 13 chr5 33838114 33838811 -165791339 + MER50 LTR ERV1 1 711 -23 434 213 11 34 chr5 33838852 33839038 -165791112 + LTR48B LTR ERV1 429 644 0 22 56 0 0 chr5 33840255 33840291 -165789859 + AT_rich Low_complexity Low_complexity 1 36 0 201 286 36 0 chr5 33841064 33841120 -165789030 + MIR SINE MIR 38 95 -113 230 0 33 0 chr5 33842058 33842088 -165788062 + (CAA)n Simple_repeat Simple_repeat 2 32 0 855 147 0 15 chr5 33843264 33843400 -165786750 + AluJo SINE Alu 1 134 -178 180 250 42 56 chr5 33843446 33843518 -165786632 - L3 LINE CR1 -525 1052 982 796 211 78 12 chr5 33844588 33844754 -165785396 + MER5B DNA MER1_type 2 178 0 388 288 217 0 chr5 33844787 33844999 -165785151 - MIR SINE MIR 0 262 5 416 204 46 37 chr5 33845167 33845275 -165784875 + MLT1C LTR MaLR 1 109 -358 935 242 21 33 chr5 33845418 33845658 -165784492 + MER93a LTR ERV1 166 402 0 * 2014 168 42 21 chr5 33845658 33846030 -165784120 + MLT1C LTR MaLR 86 465 -2 204 40 0 0 chr5 33847570 33847595 -165782555 + (TG)n Simple_repeat Simple_repeat 1 25 0 360 0 0 0 chr5 33847598 33847638 -165782512 + (GA)n Simple_repeat Simple_repeat 1 40 0 394 165 24 2 chr5 33847680 33847769 -165782381 - LTR50 LTR ERVL 0 795 435 505 245 199 25 chr5 33847775 33848182 -165781968 - LTR50 LTR ERVL -184 611 2 570 257 41 0 chr5 33848496 33848679 -165781471 + LTR50 LTR ERVL 326 604 -191 1975 192 11 6 chr5 33848976 33849330 -165780820 - MLT2D LTR ERVL -51 363 8 2841 146 49 0 chr5 33849790 33850221 -165779929 + LTR47A LTR ERVL 1 452 0 495 230 224 50 chr5 33850301 33850644 -165779506 + MLT1L LTR MaLR 172 574 -41 362 259 153 48 chr5 33851058 33851286 -165778864 + MLT1J2 LTR MaLR 74 325 -125 993 141 0 0 chr5 33851315 33851464 -165778686 + AluSg/x SINE Alu 143 291 -21 289 169 34 0 chr5 33851480 33851539 -165778611 + MLT1J1 LTR MaLR 367 427 -19 306 293 88 28 chr5 33851618 33851799 -165778351 + L2 LINE L2 3121 3312 -1 600 236 117 60 chr5 33851801 33852053 -165778097 + MIR SINE MIR 3 262 0 420 295 0 9 chr5 33853046 33853151 -165776999 - MIR SINE MIR -89 119 16 284 284 80 0 chr5 33853311 33853399 -165776751 + MIR3 SINE MIR 3 97 -111 1068 231 57 0 chr5 33853694 33853906 -165776244 - MER58A DNA MER1_type 0 224 1 257 270 56 40 chr5 33854236 33854362 -165775788 - LTR67 LTR ERVL -2 555 428 387 169 0 0 chr5 33855718 33855789 -165774361 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 438 20 0 0 chr5 33855789 33855840 -165774310 + (GA)n Simple_repeat Simple_repeat 2 52 0 1706 168 15 4 chr5 33855841 33856115 -165774035 - AluJb SINE Alu -35 277 1 1802 164 40 58 chr5 33858383 33858677 -165771473 - MLT1B LTR MaLR 0 390 103 1928 176 14 6 chr5 33858677 33859034 -165771116 - MLT1A1 LTR MaLR -2 363 4 1802 164 40 58 chr5 33859034 33859136 -165771014 - MLT1B LTR MaLR -287 103 1 1835 143 20 0 chr5 33859507 33859800 -165770350 - Tigger3(Golem) DNA MER2_type -1 3028 2730 2032 142 51 20 chr5 33859800 33860153 -165769997 - THE1B LTR MaLR 0 364 1 9932 100 3 0 chr5 33860153 33861484 -165768666 - THE1B-int LTR MaLR 0 1580 246 1183 65 0 13 chr5 33861484 33861639 -165768511 - HERV17 LTR ERV1 -6936 1690 1538 5592 86 3 55 chr5 33861806 33862697 -165767453 - HERV17 LTR ERV1 -7078 1548 704 5432 73 1 1 chr5 33862896 33863580 -165766570 - HERV17 LTR ERV1 -7921 705 22 3474 133 15 4 chr5 33863602 33864121 -165766029 - LTR17 LTR ERV1 0 780 256 578 147 20 0 chr5 33864122 33864224 -165765926 - MLT2D LTR ERVL -213 201 98 3548 144 37 5 chr5 33864224 33864691 -165765459 + L1PA16 LINE L1 5001 5510 -656 1854 151 0 13 chr5 33864691 33864995 -165765155 + AluSq SINE Alu 1 300 -13 3548 144 37 5 chr5 33864995 33865325 -165764825 + L1PA16 LINE L1 5510 5828 -338 1959 170 15 0 chr5 33865333 33865675 -165764475 - MER50 LTR ERV1 -387 347 1 279 189 61 61 chr5 33865698 33865830 -165764320 + L1MC5 LINE L1 7460 7591 -370 26 82 0 0 chr5 33865921 33865982 -165764168 + AT_rich Low_complexity Low_complexity 1 61 0 4557 115 6 1 chr5 33865996 33866657 -165763493 - THE1B-int LTR MaLR -916 664 1 2178 110 51 28 chr5 33866657 33867013 -165763137 - THE1B LTR MaLR 0 364 1 289 220 95 71 chr5 33867015 33867183 -165762967 + L1MC5 LINE L1 7751 7922 -39 194 287 58 23 chr5 33867385 33867472 -165762678 - L2 LINE L2 0 3272 3183 294 29 0 0 chr5 33867836 33867871 -165762279 + (GA)n Simple_repeat Simple_repeat 2 36 0 438 332 69 43 chr5 33868504 33868808 -165761342 + L2 LINE L2 3002 3313 0 277 198 37 49 chr5 33869352 33869433 -165760717 + MLT1J1 LTR MaLR 1 80 -366 257 306 20 20 chr5 33869556 33869654 -165760496 + MLT1J1 LTR MaLR 278 375 -71 618 227 0 8 chr5 33871468 33871596 -165758554 - FLAM_C SINE Alu -16 127 1 629 25 0 12 chr5 33871670 33871750 -165758400 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 2459 50 0 3 chr5 33872366 33872664 -165757486 + AluY SINE Alu 1 297 -14 316 285 117 15 chr5 33873363 33873500 -165756650 - MIR SINE MIR -2 260 110 1900 243 41 14 chr5 33873580 33874087 -165756063 + MER90 LTR ERV1 92 612 -2 2942 216 20 14 chr5 33874887 33875196 -165754954 + L1MB3 LINE L1 5468 5774 -409 252 0 0 0 chr5 33875196 33875224 -165754926 + (TG)n Simple_repeat Simple_repeat 2 29 0 2942 216 20 14 chr5 33875224 33875621 -165754529 + L1MB3 LINE L1 5774 6178 -5 233 301 62 48 chr5 33876361 33876507 -165753643 - Charlie8 DNA MER1_type -1941 476 329 1850 162 44 16 chr5 33877626 33877991 -165752159 - THE1C LTR MaLR 0 375 1 919 183 31 0 chr5 33878663 33878854 -165751296 - L1M2 LINE L1 -673 5639 5443 2456 189 31 17 chr5 33878860 33879437 -165750713 + L1MA10 LINE L1 5742 6326 -8 388 357 7 0 chr5 33879616 33879759 -165750391 - MIR SINE MIR -106 156 13 285 301 130 8 chr5 33880312 33880435 -165749715 + MIR SINE MIR 2 139 -123 234 343 39 20 chr5 33882317 33882419 -165747731 - MIR SINE MIR -135 127 24 404 306 107 0 chr5 33882499 33882751 -165747399 - MER20B DNA MER1_type -1 782 504 341 296 39 34 chr5 33883136 33883342 -165746808 - L1ME4a LINE L1 -161 5960 5754 3681 121 2 34 chr5 33883997 33884306 -165745844 - L1P LINE L1 -842 5304 5023 2345 72 0 16 chr5 33884306 33884612 -165745538 - AluY SINE Alu -10 301 1 3681 121 2 34 chr5 33884612 33884922 -165745228 - L1P LINE L1 -1123 5023 4705 6615 62 0 2 chr5 33884922 33885770 -165744380 + L1PA7 LINE L1 5308 6153 -1 1494 177 26 39 chr5 33886888 33887199 -165742951 - AluJb SINE Alu -5 307 1 24 32 0 0 chr5 33887785 33887816 -165742334 + AT_rich Low_complexity Low_complexity 1 31 0 631 179 0 15 chr5 33887994 33888128 -165742022 - FLAM_C SINE Alu -1 132 1 640 299 28 24 chr5 33888293 33888504 -165741646 - LTR16A LTR ERVL -2 448 237 1570 202 16 58 chr5 33888606 33888987 -165741163 + MLT1A1 LTR MaLR 1 365 0 338 185 31 0 chr5 33889430 33889495 -165740655 + HsTC2 DNA Tc2 478 544 -1354 1877 189 29 3 chr5 33889914 33890257 -165739893 + MLT1A1 LTR MaLR 14 365 0 204 125 0 0 chr5 33890739 33890771 -165739379 + (TTC)n Simple_repeat Simple_repeat 2 33 0 25 0 0 0 chr5 33891066 33891091 -165739059 + AT_rich Low_complexity Low_complexity 1 25 0 296 284 47 24 chr5 33892698 33892825 -165737325 + L2 LINE L2 1855 1984 -1330 1781 224 65 9 chr5 33892848 33893344 -165736806 + LTR27 LTR ERV1 2 501 0 812 219 47 61 chr5 33894277 33894556 -165735594 - L1MA4A LINE L1 -23 6280 6006 398 303 118 0 chr5 33894828 33895006 -165735144 + L2 LINE L2 3115 3313 0 535 206 0 0 chr5 33895543 33895640 -165734510 - MLT1A1 LTR MaLR 0 365 269 310 177 152 25 chr5 33895746 33895825 -165734325 + L1MEc LINE L1 1983 2071 -4325 307 252 86 86 chr5 33895871 33896022 -165734128 + L1MEc LINE L1 2076 2226 -4170 500 305 121 0 chr5 33896718 33896892 -165733258 - MIR SINE MIR -65 197 3 961 196 106 73 chr5 33898800 33899223 -165730927 - LTR56 LTR ERV1 0 445 9 1096 216 22 117 chr5 33899290 33899693 -165730457 - MLT1A1 LTR MaLR 0 365 1 229 376 64 7 chr5 33899700 33899841 -165730309 + MIR SINE MIR 84 232 -30 28 29 0 0 chr5 33899853 33899888 -165730262 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 33900468 33900492 -165729658 + AT_rich Low_complexity Low_complexity 1 24 0 822 276 42 8 chr5 33900564 33900803 -165729347 + MIR SINE MIR 16 262 0 302 319 99 39 chr5 33901391 33901623 -165728527 - L1ME LINE L1 -521 5600 5355 24 32 0 0 chr5 33901638 33901669 -165728481 + AT_rich Low_complexity Low_complexity 1 31 0 2598 36 42 0 chr5 33901972 33902304 -165727846 + L1PA5 LINE L1 5809 6154 0 599 150 0 60 chr5 33902593 33902726 -165727424 - FRAM SINE Alu 0 176 52 2085 121 3 14 chr5 33902849 33903146 -165727004 + AluSq SINE Alu 3 296 -17 22 35 0 0 chr5 33903161 33903190 -165726960 + AT_rich Low_complexity Low_complexity 1 29 0 1990 242 35 12 chr5 33903279 33903792 -165726358 + L1MD3 LINE L1 7471 7995 0 2069 124 3 6 chr5 33903833 33904147 -165726003 - AluSq SINE Alu 0 313 1 22 70 0 0 chr5 33904149 33904192 -165725958 + AT_rich Low_complexity Low_complexity 1 43 0 22 70 0 0 chr5 33906857 33906900 -165723250 + AT_rich Low_complexity Low_complexity 1 43 0 186 133 0 0 chr5 33907340 33907370 -165722780 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 1833 198 90 48 chr5 33908194 33908673 -165721477 + MLT1D LTR MaLR 7 505 0 823 316 53 34 chr5 33909100 33909480 -165720670 - MLT1G1 LTR MaLR -201 394 8 414 281 47 32 chr5 33911013 33911270 -165718880 - MLT1J LTR MaLR -123 323 64 1644 189 0 29 chr5 33911688 33912000 -165718150 + AluJo SINE Alu 1 303 -9 331 294 93 26 chr5 33912227 33912421 -165717729 + MLT1L LTR MaLR 374 580 -35 30 59 0 0 chr5 33912894 33912945 -165717205 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr5 33914288 33914311 -165715839 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr5 33914380 33914428 -165715722 + AT_rich Low_complexity Low_complexity 1 48 0 190 397 0 0 chr5 33914618 33914691 -165715459 - L2 LINE L2 -4 3268 3196 2451 67 0 3 chr5 33914759 33915059 -165715091 + AluY SINE Alu 1 299 -12 1686 266 98 32 chr5 33915271 33915906 -165714244 - L1MEc LINE L1 -3085 3297 2705 2025 137 3 3 chr5 33915906 33916205 -165713945 - AluSx SINE Alu -13 299 1 1686 266 98 32 chr5 33916205 33916790 -165713360 - L1MEc LINE L1 -3677 2705 2036 1843 117 89 7 chr5 33916824 33917105 -165713045 + AluSx SINE Alu 1 304 -8 1860 170 3 0 chr5 33917395 33917689 -165712461 - AluSx SINE Alu -17 295 1 917 279 46 46 chr5 33917691 33918189 -165711961 - L1MEc LINE L1 -4597 1787 1290 198 191 0 0 chr5 33918217 33918259 -165711891 + (TA)n Simple_repeat Simple_repeat 1 42 0 1833 219 44 38 chr5 33918798 33919300 -165710850 - MLT1D LTR MaLR 0 505 1 2308 133 28 22 chr5 33919809 33920171 -165709979 + THE1B LTR MaLR 1 364 0 2218 120 17 9 chr5 33920617 33920967 -165709183 - THE1A LTR MaLR -2 353 1 1700 228 0 27 chr5 33921020 33921393 -165708757 + MLT1A1 LTR MaLR 1 363 -2 3498 207 95 86 chr5 33921395 33922559 -165707591 + MLT1A1-int LTR MaLR 2 1176 -559 198 208 0 0 chr5 33922650 33922703 -165707447 + (CATA)n Simple_repeat Simple_repeat 4 56 0 2352 150 57 2 chr5 33923613 33924019 -165706131 - MSTA LTR MaLR 0 428 1 1952 183 19 0 chr5 33925750 33926122 -165704028 + L1MA7 LINE L1 5487 5865 -426 1521 165 216 3 chr5 33926124 33926475 -165703675 + MSTA LTR MaLR 3 428 0 2680 134 0 0 chr5 33926477 33926880 -165703270 + THE1C-int LTR MaLR 3 405 -1175 1318 105 0 0 chr5 33926887 33927059 -165703091 - AluSg/x SINE Alu -1 311 140 6512 169 31 9 chr5 33927120 33928259 -165701891 + THE1C-int LTR MaLR 417 1580 0 1619 152 97 29 chr5 33928261 33928610 -165701540 + THE1C LTR MaLR 3 375 0 1029 198 32 0 chr5 33928610 33928914 -165701236 + L1MA7 LINE L1 5861 6280 -11 21 36 0 0 chr5 33929029 33929057 -165701093 + AT_rich Low_complexity Low_complexity 1 28 0 273 210 0 0 chr5 33929434 33929496 -165700654 + (CATA)n Simple_repeat Simple_repeat 3 64 0 1502 319 80 40 chr5 33929712 33930362 -165699788 + MER115 DNA AcHobo 8 683 -10 2447 134 26 2 chr5 33930803 33931228 -165698922 + L1MA5A LINE L1 5860 6294 -3 2024 118 7 0 chr5 33931415 33931715 -165698435 + AluSx SINE Alu 1 302 0 432 97 0 0 chr5 33931717 33931779 -165698371 + (TA)n Simple_repeat Simple_repeat 2 63 0 30 0 0 0 chr5 33933815 33933845 -165696305 + AT_rich Low_complexity Low_complexity 1 30 0 7208 69 7 3 chr5 33933928 33934882 -165695268 - L1P LINE L1 -1689 4457 3500 6888 65 3 0 chr5 33934882 33936470 -165693680 + L1PA6 LINE L1 4598 6154 0 1774 174 23 45 chr5 33937155 33937552 -165692598 + MLT1B LTR MaLR 1 388 -2 27 0 0 0 chr5 33937808 33937835 -165692315 + AT_rich Low_complexity Low_complexity 1 27 0 270 370 92 0 chr5 33938097 33938270 -165691880 - MIR SINE MIR -11 251 63 240 264 0 0 chr5 33938444 33938531 -165691619 + (TA)n Simple_repeat Simple_repeat 1 87 0 29 47 0 0 chr5 33938605 33938648 -165691502 + AT_rich Low_complexity Low_complexity 1 43 0 1038 195 0 63 chr5 33940305 33940432 -165689718 - MLT1C LTR MaLR 0 467 358 2189 108 3 0 chr5 33940432 33940728 -165689422 - AluY SINE Alu -14 297 1 1038 195 0 63 chr5 33940728 33940821 -165689329 - MLT1C LTR MaLR -109 358 261 601 101 18 46 chr5 33940821 33940930 -165689220 - L1M2 LINE L1 -799 5513 5408 687 242 6 0 chr5 33940932 33941089 -165689061 + L1MA9 LINE L1 5884 6041 -271 348 276 23 0 chr5 33941226 33941313 -165688837 + L1PA16 LINE L1 2082 2170 -5411 2298 104 3 3 chr5 33941460 33941768 -165688382 + AluSx SINE Alu 1 308 -4 8654 237 90 25 chr5 33941862 33944171 -165685979 + L1PA16 LINE L1 2182 4340 -3264 2119 93 0 4 chr5 33944171 33944465 -165685685 + AluSg SINE Alu 14 306 0 8654 237 90 25 chr5 33944465 33947147 -165683003 + L1PA16 LINE L1 4340 7604 0 42971 35 22 2 chr5 33947156 33953342 -165676808 + L1HS LINE L1 3 6155 0 209 200 0 0 chr5 33953992 33954032 -165676118 - MER5B DNA MER1_type 0 178 139 196 270 79 45 chr5 33954141 33954230 -165675920 + MER5B DNA MER1_type 87 178 0 2085 125 0 0 chr5 33955385 33955681 -165674469 - AluSx SINE Alu -16 296 1 1636 254 36 18 chr5 33956736 33957232 -165672918 + MLT1D LTR MaLR 1 505 0 2307 98 0 0 chr5 33957412 33957717 -165672433 - AluSx SINE Alu -7 305 1 222 227 0 45 chr5 33958250 33958316 -165671834 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 495 318 9 57 chr5 33959869 33960080 -165670070 + MIR SINE MIR 2 202 -60 186 171 0 0 chr5 33960117 33960158 -165669992 + GA-rich Low_complexity Low_complexity 2 42 0 258 277 0 0 chr5 33960278 33960343 -165669807 - LTR16A1 LTR ERVL -2 455 391 2065 205 40 5 chr5 33961425 33961805 -165668345 - MSTD LTR MaLR -3 393 1 658 105 44 44 chr5 33962547 33962661 -165667489 + L1PA14 LINE L1 6044 6157 -4 39 68 0 0 chr5 33962735 33962809 -165667341 + AT_rich Low_complexity Low_complexity 1 74 0 26 50 0 0 chr5 33963010 33963050 -165667100 + AT_rich Low_complexity Low_complexity 1 40 0 26 50 0 0 chr5 33964021 33964061 -165666089 + AT_rich Low_complexity Low_complexity 1 40 0 234 0 0 0 chr5 33964128 33964154 -165665996 + (CA)n Simple_repeat Simple_repeat 2 27 0 1819 221 29 8 chr5 33964299 33964674 -165665476 + MLT2B3 LTR ERVL 133 515 -39 182 152 0 43 chr5 33964680 33964726 -165665424 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 25 31 0 0 chr5 33964903 33964935 -165665215 + AT_rich Low_complexity Low_complexity 1 32 0 388 197 0 0 chr5 33965282 33965348 -165664802 - U4 snRNA snRNA -79 66 1 25 31 0 0 chr5 33965418 33965450 -165664700 + AT_rich Low_complexity Low_complexity 1 32 0 342 67 0 0 chr5 33967578 33967623 -165662527 + (TG)n Simple_repeat Simple_repeat 2 46 0 688 330 105 6 chr5 33967678 33968029 -165662121 - LTR16B LTR ERVL -31 433 48 1124 210 36 88 chr5 33968159 33968544 -165661606 + MLT1A1 LTR MaLR 1 365 0 1533 162 4 50 chr5 33968648 33969039 -165661111 - L1M LINE L1 -740 5428 5067 * 4003 196 30 32 chr5 33969022 33969937 -165660213 + L1MA10 LINE L1 5420 6332 -2 25 51 0 0 chr5 33970662 33970701 -165659449 + AT_rich Low_complexity Low_complexity 1 39 0 254 273 0 0 chr5 33970807 33970862 -165659288 - MLT1I LTR MaLR 0 409 355 300 308 38 23 chr5 33970991 33971124 -165659026 - MLT1I LTR MaLR -270 139 5 270 343 66 28 chr5 33971127 33971340 -165658810 - L3 LINE CR1 -921 656 436 1702 137 22 41 chr5 33971412 33971727 -165658423 - MER44D DNA MER2_type -1 608 30 338 302 39 8 chr5 33971833 33971962 -165658188 + MIR SINE MIR 81 213 -49 248 303 51 29 chr5 33972107 33972282 -165657868 - L1ME LINE L1 -303 5818 5640 21 36 0 0 chr5 33972598 33972626 -165657524 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 33972921 33972950 -165657200 + AT_rich Low_complexity Low_complexity 1 29 0 256 253 77 0 chr5 33973006 33973097 -165657053 + MLT1I LTR MaLR 312 409 0 1822 123 0 4 chr5 33973399 33973667 -165656483 - AluSg SINE Alu -43 267 1 2101 74 17 37 chr5 33974061 33974357 -165655793 - AluY SINE Alu -21 290 1 1838 152 3 3 chr5 33974359 33974649 -165655501 - AluJo SINE Alu -16 296 7 2685 32 3 3 chr5 33975417 33975727 -165654423 + L1PA2 LINE L1 5846 6155 0 1389 195 102 0 chr5 33975911 33976167 -165653983 + AluJb SINE Alu 1 282 -30 299 25 25 0 chr5 33976167 33976207 -165653943 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 1820 161 21 0 chr5 33976221 33976506 -165653644 + AluJb SINE Alu 1 291 -21 583 183 92 0 chr5 33976510 33976630 -165653520 - MER3 DNA MER1_type -57 152 22 1557 183 14 30 chr5 33976632 33976791 -165653359 - AluJb SINE Alu -21 291 138 2371 98 0 7 chr5 33976791 33977097 -165653053 - AluSg SINE Alu -6 304 1 1557 183 14 30 chr5 33977097 33977232 -165652918 - AluJb SINE Alu -174 138 2 1856 149 3 45 chr5 33977295 33977603 -165652547 + AluSx SINE Alu 1 295 -17 216 336 82 27 chr5 33977756 33977866 -165652284 + MER5B DNA MER1_type 55 170 -8 * 269 211 0 0 chr5 33977858 33977915 -165652235 + MIR3 SINE MIR 147 203 -5 910 102 0 0 chr5 33978073 33978191 -165651959 + FLAM_C SINE Alu 1 118 -15 2114 138 3 3 chr5 33978511 33978849 -165651301 + AluSx SINE Alu 1 312 0 1416 163 41 91 chr5 33979252 33979375 -165650775 + AluJo SINE Alu 2 130 -182 1739 133 18 14 chr5 33979375 33979654 -165650496 + AluSg SINE Alu 1 280 -30 1416 163 41 91 chr5 33979654 33979850 -165650300 + AluJo SINE Alu 130 305 -7 257 248 191 19 chr5 33979920 33980025 -165650125 - L2 LINE L2 -212 3060 2938 2055 112 6 29 chr5 33980074 33980386 -165649764 - AluSx SINE Alu -7 305 1 1447 157 39 57 chr5 33981211 33981339 -165648811 + AluJo SINE Alu 1 130 -182 2049 124 10 0 chr5 33981339 33981629 -165648521 - AluSx SINE Alu -19 293 1 1447 157 39 57 chr5 33981629 33981780 -165648370 + AluJo SINE Alu 130 275 -37 423 0 0 0 chr5 33981785 33981832 -165648318 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2292 107 0 0 chr5 33982287 33982587 -165647563 - AluSg SINE Alu -10 300 1 23 0 0 0 chr5 33982610 33982633 -165647517 + AT_rich Low_complexity Low_complexity 1 23 0 1980 122 0 0 chr5 33982633 33982903 -165647247 - AluSx SINE Alu -4 308 39 1588 108 27 0 chr5 33983424 33983742 -165646408 + L1P4 LINE L1 5161 5485 -676 2292 95 0 7 chr5 33983743 33984048 -165646102 + AluSx SINE Alu 2 304 -8 2013 218 137 58 chr5 33984226 33984375 -165645775 + MER82 DNA MER2_type 1 137 -516 2111 112 0 43 chr5 33984375 33984678 -165645472 + AluSx SINE Alu 1 290 -22 2013 218 137 58 chr5 33984678 33985133 -165645017 + MER82 DNA MER2_type 137 653 0 226 321 30 30 chr5 33985323 33985457 -165644693 + MLT1H LTR MaLR 29 162 -387 982 146 16 60 chr5 33985799 33985984 -165644166 - FAM SINE Alu -1 48 1 430 252 50 8 chr5 33986045 33986164 -165643986 + MLT1G1 LTR MaLR 16 139 -456 2440 120 25 8 chr5 33986263 33986621 -165643529 + THE1B LTR MaLR 1 364 0 9483 107 65 45 chr5 33986622 33988164 -165641986 + THE1B-int LTR MaLR 2 1574 -6 1283 123 49 5 chr5 33988171 33988374 -165641776 + THE1B LTR MaLR 3 214 -150 801 177 15 0 chr5 33988383 33988513 -165641637 - FLAM_C SINE Alu -1 132 1 662 146 0 0 chr5 33988515 33988618 -165641532 - AluSp/q SINE Alu -1 312 210 21 0 0 0 chr5 33993490 33993511 -165636639 + AT_rich Low_complexity Low_complexity 1 21 0 305 245 113 19 chr5 33993919 33994025 -165636125 + L2 LINE L2 3104 3219 -94 1691 163 80 0 chr5 33994029 33994329 -165635821 + MER2 DNA MER2_type 1 324 -21 1370 118 91 0 chr5 33994329 33994550 -165635600 + L1MA6 LINE L1 6056 6296 -4 23 33 0 0 chr5 33994566 33994596 -165635554 + AT_rich Low_complexity Low_complexity 1 30 0 1674 217 13 59 chr5 33994826 33994870 -165635280 + MLT1A2 LTR MaLR 1 45 -329 2505 57 3 0 chr5 33994870 33995167 -165634983 + AluY SINE Alu 1 298 -13 1674 217 13 59 chr5 33995167 33995445 -165634705 + MLT1A2 LTR MaLR 45 304 -70 1935 162 30 0 chr5 33995445 33995748 -165634402 - AluSx SINE Alu 0 312 1 1674 217 13 59 chr5 33995748 33995816 -165634334 + MLT1A2 LTR MaLR 304 374 0 1021 191 77 0 chr5 33995836 33995964 -165634186 + MER3 DNA MER1_type 1 150 -59 2480 59 0 10 chr5 33995964 33996270 -165633880 - AluY SINE Alu -8 303 1 1021 191 77 0 chr5 33996270 33996335 -165633815 + MER3 DNA MER1_type 150 209 0 636 210 107 51 chr5 33996832 33997031 -165633119 - MLT1F LTR MaLR 0 626 334 1351 181 49 58 chr5 33997032 33997264 -165632886 - MLT1A1 LTR MaLR 0 365 134 2011 124 0 28 chr5 33997264 33997595 -165632555 + AluSg SINE Alu 1 323 0 1351 181 49 58 chr5 33997595 33997687 -165632463 - MLT1A1 LTR MaLR -231 134 43 528 300 13 0 chr5 33997895 33998045 -165632105 - MLT1F LTR MaLR -400 167 16 399 371 34 21 chr5 33999269 33999560 -165630590 + L2 LINE L2 1978 2272 -1042 21 0 0 0 chr5 33999962 33999983 -165630167 + AT_rich Low_complexity Low_complexity 1 21 0 256 302 94 9 chr5 34000378 34000484 -165629666 + L2 LINE L2 3158 3272 0 23 33 0 0 chr5 34001767 34001797 -165628353 + AT_rich Low_complexity Low_complexity 1 30 0 300 273 0 0 chr5 34002152 34002240 -165627910 + MIR SINE MIR 100 187 -75 1985 215 14 65 chr5 34002318 34002716 -165627434 + L1M2 LINE L1 2528 2945 -3903 2154 133 0 0 chr5 34002716 34003017 -165627133 + AluSg SINE Alu 1 301 -9 1985 215 14 65 chr5 34003017 34003533 -165626617 + L1M2 LINE L1 2945 3392 -3456 2712 189 47 2 chr5 34003533 34004061 -165626089 + L1PB4 LINE L1 5604 6155 -1 3300 232 61 22 chr5 34004213 34004647 -165625503 + L1MC3 LINE L1 6147 6563 -1222 2057 170 123 5 chr5 34004647 34005030 -165625120 + MSTA LTR MaLR 1 428 0 3300 232 61 22 chr5 34005030 34005532 -165624618 + L1MC3 LINE L1 6563 7119 -666 606 211 34 46 chr5 34005596 34005771 -165624379 + MER104 DNA Tc2 7 179 -1 204 40 0 0 chr5 34006586 34006611 -165623539 + (TA)n Simple_repeat Simple_repeat 1 25 0 2367 67 0 10 chr5 34007101 34007400 -165622750 - AluY SINE Alu -15 296 1 584 225 7 53 chr5 34007713 34007864 -165622286 - MER20 DNA MER1_type -52 167 24 770 249 19 19 chr5 34008225 34008430 -165621720 + MER20 DNA MER1_type 8 212 -7 672 168 40 0 chr5 34008621 34008746 -165621404 + L1PA13 LINE L1 6033 6162 -1 33 0 0 0 chr5 34009406 34009439 -165620711 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr5 34010118 34010142 -165620008 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 34010201 34010229 -165619921 + AT_rich Low_complexity Low_complexity 1 28 0 3545 33 0 0 chr5 34010715 34011136 -165619014 - L1PA3 LINE L1 -14 6141 5721 6897 22 0 0 chr5 34011136 34012295 -165617855 + L1PA3 LINE L1 4563 5721 -434 429 268 0 0 chr5 34012465 34012562 -165617588 + Tigger3(Golem) DNA MER2_type 2 98 -2931 380 262 0 0 chr5 34012575 34012659 -165617491 + Tigger3(Golem) DNA MER2_type 2954 3037 0 587 165 0 9 chr5 34013005 34013120 -165617030 + (TA)n Simple_repeat Simple_repeat 1 114 0 1958 138 7 0 chr5 34013120 34013418 -165616732 - AluSq SINE Alu -11 302 3 28 48 0 0 chr5 34013776 34013818 -165616332 + AT_rich Low_complexity Low_complexity 1 42 0 1364 208 50 10 chr5 34014943 34015241 -165614909 - AluJo SINE Alu 0 312 3 285 149 0 60 chr5 34016555 34016622 -165613528 + MADE1 DNA Mariner 1 63 -17 243 309 170 31 chr5 34016786 34017045 -165613105 - MLT1J LTR MaLR -210 301 7 329 243 0 162 chr5 34019118 34019291 -165610859 - L2 LINE L2 -4 3309 3165 386 69 17 0 chr5 34019801 34019859 -165610291 + (CA)n Simple_repeat Simple_repeat 1 59 0 531 309 43 13 chr5 34020159 34020392 -165609758 - LTR16A LTR ERVL -184 266 27 23 78 0 0 chr5 34021766 34021817 -165608333 + AT_rich Low_complexity Low_complexity 1 51 0 29 0 0 0 chr5 34022144 34022173 -165607977 + AT_rich Low_complexity Low_complexity 1 29 0 6187 34 0 1 chr5 34022332 34023072 -165607078 - L1PA3 LINE L1 -3 6152 5414 10610 37 0 0 chr5 34023072 34024375 -165605775 + L1PA3 LINE L1 4101 5403 -743 209 355 117 19 chr5 34024916 34025130 -165605020 + L2 LINE L2 2029 2263 -1051 21 0 0 0 chr5 34025206 34025227 -165604923 + AT_rich Low_complexity Low_complexity 1 21 0 1068 141 98 86 chr5 34025911 34026166 -165603984 - Tigger2 DNA MER2_type -10 2708 2451 3803 183 34 0 chr5 34026220 34026953 -165603197 - Tigger2 DNA MER2_type -1959 759 2 1285 282 94 80 chr5 34027051 34028560 -165601590 + MER110-int LTR ERV1 1952 3590 -1057 675 273 103 8 chr5 34028767 34029020 -165601130 + MLT1D LTR MaLR 1 277 -228 289 170 0 0 chr5 34029023 34029070 -165601080 + MLT1A2 LTR MaLR 1 47 -327 381 300 0 0 chr5 34029112 34029222 -165600928 + MLT1A2 LTR MaLR 51 160 -214 940 191 11 26 chr5 34029274 34029485 -165600665 + MLT1A2 LTR MaLR 182 374 0 * 960 274 9 0 chr5 34029485 34029714 -165600436 + MLT1D LTR MaLR 275 505 0 665 197 108 18 chr5 34029852 34030072 -165600078 - MER33 DNA MER1_type -98 226 1 180 0 0 0 chr5 34030111 34030131 -165600019 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 476 324 43 10 chr5 34030282 34030489 -165599661 + MER110 LTR ERV1 242 455 -36 5207 156 7 7 chr5 34030889 34031731 -165598419 + MSTA-int LTR MaLR 739 1580 0 1582 185 130 18 chr5 34031731 34032115 -165598035 + MSTA LTR MaLR 1 427 -1 1573 251 48 15 chr5 34032556 34033011 -165597139 - MLT1D LTR MaLR 0 505 36 289 308 8 26 chr5 34033282 34033399 -165596751 + MIR SINE MIR 124 238 -24 767 269 28 9 chr5 34034596 34034808 -165595342 + MER20 DNA MER1_type 2 217 -2 219 69 0 0 chr5 34034846 34034875 -165595275 + (T)n Simple_repeat Simple_repeat 1 29 0 314 371 87 27 chr5 34035142 34035544 -165594606 - MLT1J1 LTR MaLR 0 446 21 1062 122 6 0 chr5 34035569 34035725 -165594425 + AluSg/x SINE Alu 151 307 -5 2108 115 10 6 chr5 34035873 34036185 -165593965 - AluSq SINE Alu 0 313 1 410 333 70 33 chr5 34036876 34037089 -165593061 + L1PA16 LINE L1 790 1010 -6564 12236 240 25 20 chr5 34037213 34040945 -165589205 + L1PA16 LINE L1 2182 5895 -1709 1061 173 154 58 chr5 34040945 34041205 -165588945 + AluJo SINE Alu 2 286 -16 706 71 0 18 chr5 34041205 34041317 -165588833 + (GGAA)n Simple_repeat Simple_repeat 3 112 0 12236 240 25 20 chr5 34041317 34042145 -165588005 + L1PA16 LINE L1 5895 6774 -830 1775 86 19 89 chr5 34042145 34042459 -165587691 + L1PA10 LINE L1 5876 6167 -1 12236 240 25 20 chr5 34042459 34043190 -165586960 + L1PA16 LINE L1 6774 7500 -104 2046 192 104 41 chr5 34043589 34044677 -165585473 - pTR5 LTR ERV1 -259 2179 743 424 337 61 4 chr5 34044997 34045261 -165584889 - MER110 LTR ERV1 -26 465 187 254 231 9 111 chr5 34045335 34045443 -165584707 - MER110A LTR ERV1 -298 170 74 229 65 0 43 chr5 34045641 34045687 -165584463 + (TG)n Simple_repeat Simple_repeat 2 45 0 344 119 17 0 chr5 34046637 34046696 -165583454 + (TA)n Simple_repeat Simple_repeat 1 60 0 21 0 0 0 chr5 34047423 34047444 -165582706 + AT_rich Low_complexity Low_complexity 1 21 0 31 82 0 0 chr5 34047865 34047938 -165582212 + AT_rich Low_complexity Low_complexity 1 73 0 366 334 54 49 chr5 34049153 34049526 -165580624 + L1ME LINE L1 4348 4722 -1424 287 295 78 61 chr5 34049725 34050345 -165579805 + L1ME LINE L1 5290 5918 -252 225 300 118 39 chr5 34050520 34050800 -165579350 + L1MC/D LINE L1 5296 5597 -2211 2856 6 0 3 chr5 34050898 34051217 -165578933 + AluYb8 SINE Alu 1 318 0 243 88 0 0 chr5 34051798 34051832 -165578318 + (CA)n Simple_repeat Simple_repeat 1 34 0 22 0 0 0 chr5 34051872 34051894 -165578256 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 34052067 34052088 -165578062 + AT_rich Low_complexity Low_complexity 1 21 0 2008 139 7 3 chr5 34052231 34052541 -165577609 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr5 34052971 34052993 -165577157 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 34053086 34053109 -165577041 + AT_rich Low_complexity Low_complexity 1 23 0 1293 269 98 44 chr5 34053342 34053967 -165576183 + L1ME LINE L1 3855 4564 -1582 2519 138 24 12 chr5 34053967 34054386 -165575764 + MSTA LTR MaLR 5 428 0 1293 269 98 44 chr5 34054386 34054844 -165575306 + L1ME LINE L1 4564 4996 -1150 790 235 184 27 chr5 34055140 34055514 -165574636 + L1ME LINE L1 5329 5761 -403 4509 157 86 39 chr5 34055579 34055935 -165574215 + L1MC1 LINE L1 5283 5621 -712 1855 191 57 24 chr5 34055935 34056353 -165573797 - MSTB1 LTR MaLR 0 432 1 4509 157 86 39 chr5 34056353 34057000 -165573150 + L1MC1 LINE L1 5621 6333 0 329 0 0 0 chr5 34057478 34057516 -165572634 - L1P1 LINE L1 -621 5534 5497 275 0 0 0 chr5 34057517 34057557 -165572593 + L1PA2 LINE L1 6116 6155 0 479 289 191 33 chr5 34057811 34058178 -165571972 - L2 LINE L2 0 3313 2889 27 29 0 0 chr5 34058259 34058293 -165571857 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr5 34059041 34059064 -165571086 + AT_rich Low_complexity Low_complexity 1 23 0 1567 198 16 29 chr5 34259789 34260103 -165370047 - AluJb SINE Alu -2 310 1 880 259 100 90 chr5 34260158 34260737 -165369413 + MLT1E LTR MaLR 4 588 -5 270 67 17 50 chr5 34262593 34262653 -165367497 + (GGGTG)n Simple_repeat Simple_repeat 4 61 0 299 167 0 28 chr5 34263312 34263384 -165366766 + (CATATA)n Simple_repeat Simple_repeat 4 73 0 2181 102 10 3 chr5 34263552 34263846 -165366304 + AluSx SINE Alu 1 296 -16 393 305 131 27 chr5 34263847 34264167 -165365983 + L2 LINE L2 2742 3086 -186 316 280 122 28 chr5 34264230 34264444 -165365706 - L2 LINE L2 -825 2489 2256 219 311 41 16 chr5 34264553 34264675 -165365475 + L2 LINE L2 2152 2276 -1038 235 310 0 0 chr5 34265284 34265429 -165364721 + C-rich Low_complexity Low_complexity 1 145 0 * 417 151 21 65 chr5 34265324 34265510 -165364640 + (CCA)n Simple_repeat Simple_repeat 1 178 0 314 114 9 48 chr5 34265511 34265616 -165364534 + (CACCC)n Simple_repeat Simple_repeat 1 101 0 12106 185 24 16 chr5 34265920 34268336 -165361814 - L1P5 LINE L1 -424 6378 3925 2269 78 17 3 chr5 34268336 34268630 -165361520 - AluSc SINE Alu -11 298 1 12106 185 24 16 chr5 34268630 34269400 -165360750 - L1P5 LINE L1 -2877 3925 3163 326 236 0 1 chr5 34269403 34269497 -165360653 - L1P5 LINE L1 -4894 1903 1795 30 0 0 0 chr5 34269497 34269527 -165360623 + AT_rich Low_complexity Low_complexity 1 30 0 12972 29 0 0 chr5 34269528 34271834 -165358316 - L1PA3 LINE L1 -1 6154 3844 406 268 79 53 chr5 34272147 34272502 -165357648 + MLT1E3 LTR MaLR 261 624 0 28 91 0 0 chr5 34273980 34274057 -165356093 + AT_rich Low_complexity Low_complexity 1 77 0 2541 49 0 0 chr5 34274971 34275275 -165354875 - AluY SINE Alu -7 304 1 633 158 0 0 chr5 34275290 34275410 -165354740 + CT-rich Low_complexity Low_complexity 2 121 0 221 171 0 0 chr5 34276280 34276348 -165353802 + (TA)n Simple_repeat Simple_repeat 1 68 0 1962 130 4 0 chr5 34277403 34277679 -165352471 + AluSx SINE Alu 1 277 -35 3110 218 15 62 chr5 34279083 34279778 -165350372 + L1MC3 LINE L1 5592 6233 -1552 562 113 94 9 chr5 34279778 34279884 -165350266 + L1PB2 LINE L1 6030 6144 -7 3110 218 15 62 chr5 34279884 34280119 -165350031 + L1MC3 LINE L1 6233 6478 -1307 489 244 171 49 chr5 34280128 34280374 -165349776 + MER57B LTR ERV1 1 276 -126 2030 133 29 32 chr5 34280481 34280857 -165349293 + THE1C LTR MaLR 1 375 0 2270 44 6 72 chr5 34280880 34281201 -165348949 + AluY SINE Alu 1 300 -11 346 189 0 0 chr5 34281276 34281350 -165348800 + MER57A LTR ERV1 330 403 0 1784 233 45 4 chr5 34281350 34281835 -165348315 + L1MC3 LINE L1 6485 6989 -796 1048 115 0 30 chr5 34281837 34282002 -165348148 + AluSg/x SINE Alu 153 312 0 2299 179 107 10 chr5 34282003 34282583 -165347567 + L1MC3 LINE L1 6980 7615 -170 3453 180 55 25 chr5 34283357 34284089 -165346061 + MER21B LTR ERV1 1 754 -109 1223 275 124 28 chr5 34284514 34285053 -165345097 + MLT1F1 LTR MaLR 3 567 0 1486 128 78 101 chr5 34285234 34285540 -165344610 + AluY SINE Alu 5 303 -8 266 292 31 54 chr5 34286901 34287031 -165343119 + L2 LINE L2 2956 3082 -190 213 226 38 0 chr5 34287250 34287303 -165342847 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 742 301 30 15 chr5 34287820 34288218 -165341932 - MER90 LTR ERV1 -9 566 163 2136 118 3 10 chr5 34289532 34289845 -165340305 + AluSq SINE Alu 1 311 -2 24 0 0 0 chr5 34289939 34289963 -165340187 + AT_rich Low_complexity Low_complexity 1 24 0 201 147 0 0 chr5 34290509 34290543 -165339607 + (T)n Simple_repeat Simple_repeat 1 34 0 2240 131 35 8 chr5 34291671 34292100 -165338050 - Tigger2 DNA MER2_type 0 2718 4 560 290 0 0 chr5 34292660 34292784 -165337366 - L2 LINE L2 -4 3309 3186 2344 78 0 3 chr5 34293188 34293484 -165336666 - AluY SINE Alu -16 295 1 182 190 0 17 chr5 34293676 34293734 -165336416 + CT-rich Low_complexity Low_complexity 4 60 0 222 205 0 0 chr5 34295396 34295435 -165334715 + (TG)n Simple_repeat Simple_repeat 1 39 0 269 373 130 22 chr5 34296232 34296554 -165333596 - L2 LINE L2 -1 3271 2915 22 35 0 0 chr5 34296698 34296727 -165333423 + AT_rich Low_complexity Low_complexity 1 29 0 306 243 58 48 chr5 34298061 34298164 -165331986 - MIR SINE MIR -48 214 111 205 179 0 0 chr5 34298341 34298380 -165331770 + T-rich Low_complexity Low_complexity 2 40 0 258 252 135 9 chr5 34299297 34299408 -165330742 - L2 LINE L2 -9 3263 3139 245 225 62 0 chr5 34300393 34300473 -165329677 - L1MC4 LINE L1 -1344 6698 6614 489 125 0 0 chr5 34300518 34300606 -165329544 + (TA)n Simple_repeat Simple_repeat 1 88 0 393 270 46 13 chr5 34302595 34302820 -165327330 + L1MB8 LINE L1 5947 6181 -3 301 223 99 33 chr5 34302850 34302971 -165327179 + L1MEd LINE L1 597 725 -5394 204 122 0 49 chr5 34303652 34303693 -165326457 + MIR SINE MIR 41 79 -129 704 259 42 36 chr5 34303702 34303895 -165326255 + MIR SINE MIR 48 241 -21 512 292 60 0 chr5 34304168 34304336 -165325814 + L2 LINE L2 2550 2727 -587 275 347 48 16 chr5 34305043 34305167 -165324983 + MIR SINE MIR 20 147 -61 390 260 24 55 chr5 34305446 34305573 -165324577 + MIR SINE MIR 31 153 -109 607 188 29 7 chr5 34305712 34305850 -165324300 - L1M1 LINE L1 -7416 149 9 524 140 11 0 chr5 34305888 34305981 -165324169 + GA-rich Low_complexity Low_complexity 1 94 0 564 179 30 146 chr5 34306031 34306152 -165323998 + L1MC/D LINE L1 5215 5348 -1039 2207 99 0 0 chr5 34306152 34306444 -165323706 + AluY SINE Alu 3 294 -17 564 179 30 146 chr5 34306444 34306727 -165323423 + L1MC/D LINE L1 5348 5571 -816 300 230 236 24 chr5 34306950 34307115 -165323035 - MIR SINE MIR 0 262 63 186 43 0 0 chr5 34307635 34307658 -165322492 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 23 33 0 0 chr5 34308631 34308661 -165321489 + AT_rich Low_complexity Low_complexity 1 30 0 201 147 0 0 chr5 34308970 34309004 -165321146 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 527 283 169 5 chr5 34311412 34311596 -165318554 + MIR SINE MIR 8 221 -41 452 296 24 19 chr5 34312539 34312745 -165317405 + L1M4 LINE L1 16 222 -6320 259 261 69 119 chr5 34312943 34313322 -165316828 + L1M4 LINE L1 515 874 -5668 6870 188 16 8 chr5 34313700 34315744 -165314406 + L1P5 LINE L1 3726 5780 -371 990 156 0 0 chr5 34315744 34315917 -165314233 + (TA)n Simple_repeat Simple_repeat 2 174 0 225 143 0 0 chr5 34315926 34315968 -165314182 - LTR66 LTR ERVL -171 439 398 12574 133 113 18 chr5 34316101 34316535 -165313615 - L1PBa LINE L1 -3543 3319 2927 2311 112 3 0 chr5 34316535 34316840 -165313310 - AluSx SINE Alu -6 306 1 12574 133 113 18 chr5 34316840 34318858 -165311292 - L1PBa LINE L1 -3935 2927 637 1141 141 22 0 chr5 34318859 34319043 -165311107 - L1PBa LINE L1 -6675 188 1 1196 180 142 15 chr5 34319108 34319375 -165310775 + MLT1A1 LTR MaLR 1 301 -64 1319 222 2 7 chr5 34319675 34320085 -165310065 + LTR40a LTR ERVL 1 517 -2 683 277 5 5 chr5 34321510 34321694 -165308456 - MLT2F LTR ERVL -4 659 476 184 296 74 0 chr5 34322089 34322170 -165307980 + MIR SINE MIR 104 190 -72 269 193 117 111 chr5 34322475 34322646 -165307504 - L1ME4a LINE L1 -3 6118 5947 32 0 0 0 chr5 34324033 34324065 -165306085 + AT_rich Low_complexity Low_complexity 1 32 0 1196 216 0 11 chr5 34324382 34324655 -165305495 + L1MD3 LINE L1 7725 7994 -1 306 350 29 0 chr5 34324972 34325117 -165305033 - L1ME4a LINE L1 -543 5578 5427 213 378 149 15 chr5 34325358 34325813 -165304337 - L2 LINE L2 -574 2740 2225 910 216 47 0 chr5 34325843 34326033 -165304117 - MER20 DNA MER1_type -20 199 1 312 278 73 52 chr5 34326125 34326316 -165303834 - L2 LINE L2 -1251 2063 1869 3282 206 76 25 chr5 34326738 34327615 -165302535 - MER63C DNA MER1_type 0 930 9 2234 169 58 29 chr5 34328431 34328629 -165301521 + MLT1C LTR MaLR 1 192 -275 267 31 0 0 chr5 34328629 34328661 -165301489 + (CA)n Simple_repeat Simple_repeat 2 33 0 2234 169 58 29 chr5 34328661 34328911 -165301239 + MLT1C LTR MaLR 192 462 -5 478 246 0 36 chr5 34328978 34329088 -165301062 + L2 LINE L2 3160 3265 -7 207 0 0 0 chr5 34329526 34329549 -165300601 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 411 141 0 0 chr5 34330271 34330349 -165299801 + (CA)n Simple_repeat Simple_repeat 2 79 0 308 206 21 41 chr5 34330601 34330698 -165299452 + L1MEd LINE L1 1123 1217 -4902 391 77 0 0 chr5 34331906 34331998 -165298152 + L1PA10 LINE L1 6059 6168 0 235 257 104 45 chr5 34332225 34332417 -165297733 + L1MEd LINE L1 1012 1218 -4901 291 114 0 0 chr5 34332417 34332461 -165297689 + (CA)n Simple_repeat Simple_repeat 2 45 0 331 315 206 11 chr5 34333533 34333800 -165296350 + L1ME LINE L1 5501 5819 -302 2328 98 3 0 chr5 34334912 34335207 -165294943 - AluSg SINE Alu -14 296 1 783 162 214 0 chr5 34336150 34336323 -165293827 + MER2 DNA MER2_type 1 210 -135 25 51 0 0 chr5 34336330 34336369 -165293781 + AT_rich Low_complexity Low_complexity 1 39 0 2535 39 0 16 chr5 34336766 34337071 -165293079 - AluY SINE Alu -11 300 1 23 33 0 0 chr5 34337483 34337513 -165292637 + AT_rich Low_complexity Low_complexity 1 30 0 276 154 0 0 chr5 34337747 34337799 -165292351 + (CA)n Simple_repeat Simple_repeat 2 53 0 796 256 31 75 chr5 34338096 34338389 -165291761 - LTR40a LTR ERVL -118 401 122 188 327 133 40 chr5 34341986 34342136 -165288014 + MIR SINE MIR 98 261 -1 748 138 0 0 chr5 34342306 34342415 -165287735 - MLT1A1 LTR MaLR -256 109 1 13263 191 31 18 chr5 34344409 34348186 -165281964 + L1MA4A LINE L1 6 4132 -2873 2381 90 0 3 chr5 34348186 34348487 -165281663 + AluSc SINE Alu 1 300 -9 13263 191 31 18 chr5 34348487 34351402 -165278748 + L1MA4A LINE L1 4132 7005 0 2060 118 7 14 chr5 34351773 34352069 -165278081 - AluSx SINE Alu -16 296 3 306 0 0 0 chr5 34352221 34352255 -165277895 + (CA)n Simple_repeat Simple_repeat 2 35 0 341 400 43 21 chr5 34352285 34352660 -165277490 + L2 LINE L2 1263 1645 -1669 189 348 174 22 chr5 34352776 34353052 -165277098 - L2 LINE L2 -2787 527 210 1423 228 47 28 chr5 34354045 34354152 -165275998 + MLT2D LTR ERVL 1 104 -310 1602 171 94 3 chr5 34354152 34354461 -165275689 - MER1B DNA MER1_type 0 337 1 1423 228 47 28 chr5 34354461 34354712 -165275438 + MLT2D LTR ERVL 104 366 -48 184 186 34 0 chr5 34354766 34354825 -165275325 + GA-rich Low_complexity Low_complexity 2 62 0 1649 116 64 34 chr5 34354891 34355158 -165274992 + THE1B LTR MaLR 1 275 -89 501 159 34 0 chr5 34355196 34355284 -165274866 - Tigger3(Golem) DNA MER2_type -52 2977 2887 271 184 0 34 chr5 34355299 34355446 -165274704 + (TA)n Simple_repeat Simple_repeat 2 143 0 210 280 0 0 chr5 34355761 34355836 -165274314 + (CATATA)n Simple_repeat Simple_repeat 2 76 0 228 111 93 0 chr5 34355836 34355890 -165274260 - L1MCa LINE L1 -4362 2064 2006 * 256 219 98 0 chr5 34355859 34355941 -165274209 - L1MC4 LINE L1 -1339 6983 6894 264 167 0 0 chr5 34355942 34355990 -165274160 + (TA)n Simple_repeat Simple_repeat 1 48 0 2666 90 3 0 chr5 34355990 34356357 -165273793 + L1PB1 LINE L1 5782 6149 -2 459 73 24 24 chr5 34356748 34356830 -165273320 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 22 35 0 0 chr5 34357893 34357922 -165272228 + AT_rich Low_complexity Low_complexity 1 29 0 249 234 47 0 chr5 34358983 34359047 -165271103 + L2 LINE L2 2864 2930 -342 938 208 0 0 chr5 34359256 34359415 -165270735 - FRAM SINE Alu -7 159 1 182 121 0 30 chr5 34360620 34360653 -165269497 - L2 LINE L2 -968 2346 2315 1115 179 5 0 chr5 34361031 34361163 -165268987 + AluSg1 SINE Alu 1 133 -176 2052 84 3 52 chr5 34361163 34361298 -165268852 + AluSg SINE Alu 1 141 -169 2334 92 0 0 chr5 34361298 34361591 -165268559 + AluY SINE Alu 3 295 -16 2052 84 3 52 chr5 34361591 34361763 -165268387 + AluSg SINE Alu 141 293 -17 769 258 114 54 chr5 34362054 34362620 -165267530 - MLT1F1 LTR MaLR -2 593 14 492 285 186 40 chr5 34363317 34363570 -165266580 + MLT1H LTR MaLR 260 549 0 295 359 39 35 chr5 34363866 34364097 -165266053 + L2 LINE L2 2826 3057 -215 222 283 0 0 chr5 34364578 34364624 -165265526 + (CA)n Simple_repeat Simple_repeat 1 46 0 360 247 10 10 chr5 34364726 34364823 -165265327 - MER94 DNA DNA -33 101 5 2137 123 3 7 chr5 34364897 34365199 -165264951 - AluSq SINE Alu -12 301 1 1531 249 98 32 chr5 34365293 34365943 -165264207 - L1ME2 LINE L1 -19 7166 6474 377 95 16 0 chr5 34368073 34368136 -165262014 + (CA)n Simple_repeat Simple_repeat 1 64 0 8139 128 30 118 chr5 34369250 34369344 -165260806 + L1PBa LINE L1 2 103 -6760 1794 157 53 36 chr5 34369344 34369700 -165260450 - THE1B LTR MaLR 0 364 3 11636 93 2 12 chr5 34369702 34370016 -165260134 - THE1B-int LTR MaLR 0 1580 1265 2336 95 0 28 chr5 34370016 34370333 -165259817 - AluY SINE Alu -2 309 2 11636 93 2 12 chr5 34370333 34371613 -165258537 - THE1B-int LTR MaLR -315 1265 1 2318 100 47 33 chr5 34371613 34371972 -165258178 - THE1B LTR MaLR 0 364 1 8139 128 30 118 chr5 34371972 34372232 -165257918 + L1PBa LINE L1 103 384 -6479 2115 123 16 7 chr5 34372232 34372541 -165257609 + AluSx SINE Alu 1 312 0 8139 128 30 118 chr5 34372541 34373907 -165256243 + L1PBa LINE L1 384 1574 -5289 3526 155 24 3 chr5 34373894 34374858 -165255292 + L1PB1 LINE L1 4810 5789 -362 * 310 267 58 0 chr5 34374859 34374945 -165255205 + L1MC4 LINE L1 6616 6706 -1336 2038 153 5 24 chr5 34374960 34375338 -165254812 + L1PB1 LINE L1 5781 6151 0 203 137 59 20 chr5 34375640 34375691 -165254459 + T-rich Low_complexity Low_complexity 5 57 0 318 289 39 95 chr5 34375712 34376017 -165254133 - L1ME2 LINE L1 -747 6420 6133 22 35 0 0 chr5 34376222 34376251 -165253899 + AT_rich Low_complexity Low_complexity 1 29 0 1105 191 121 59 chr5 34377023 34377056 -165253094 + LTR37A LTR ERV1 15 45 -381 1016 257 5 0 chr5 34377056 34377278 -165252872 + MER58A DNA MER1_type 1 223 -1 1105 191 121 59 chr5 34377278 34377632 -165252518 + LTR37A LTR ERV1 45 426 0 1531 292 85 4 chr5 34377638 34378407 -165251743 - MER69 DNA AcHobo -1465 1061 134 29 47 0 0 chr5 34378640 34378683 -165251467 + AT_rich Low_complexity Low_complexity 1 43 0 794 246 66 36 chr5 34379537 34379842 -165250308 + HAL1 LINE L1 2 315 -2192 1586 193 0 24 chr5 34379938 34380233 -165249917 + AluJo SINE Alu 1 288 -24 314 338 44 44 chr5 34380691 34380895 -165249255 + L2 LINE L2 8 211 -3103 834 296 119 74 chr5 34380899 34381867 -165248283 + L2 LINE L2 2288 3313 0 25 65 0 0 chr5 34382854 34382900 -165247250 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr5 34383037 34383058 -165247092 + AT_rich Low_complexity Low_complexity 1 21 0 345 200 148 9 chr5 34383201 34383316 -165246834 + LTR16C LTR ERVL 337 467 -24 614 267 82 5 chr5 34383363 34383558 -165246592 + L1MEc LINE L1 32 241 -6155 248 185 19 0 chr5 34383710 34383764 -165246386 - L1MA9 LINE L1 -5 6307 6253 1290 71 0 30 chr5 34383765 34383934 -165246216 + AluY SINE Alu 1 164 -147 3772 222 31 60 chr5 34383937 34385205 -165244945 - L1ME2 LINE L1 -1271 5896 4683 303 67 0 0 chr5 34385205 34385250 -165244900 - MADE1 DNA Mariner -35 45 1 3772 222 31 60 chr5 34385250 34385702 -165244448 - L1ME2 LINE L1 -2484 4683 4220 7873 164 18 6 chr5 34385707 34388252 -165241898 + L1MA2 LINE L1 3729 6304 0 3157 278 64 15 chr5 34388272 34389905 -165240245 - L1ME2 LINE L1 -2953 4214 2483 2540 243 46 57 chr5 34389910 34389964 -165240186 - L1ME2 LINE L1 -4519 2579 2526 357 24 0 0 chr5 34389964 34390006 -165240144 + (TA)n Simple_repeat Simple_repeat 1 42 0 2540 243 46 57 chr5 34390006 34390026 -165240124 - L1ME2 LINE L1 -4572 2526 2507 2209 107 57 28 chr5 34390026 34390380 -165239770 - THE1B LTR MaLR 0 364 1 11460 94 11 4 chr5 34390380 34391949 -165238201 - THE1B-int LTR MaLR 0 1580 1 2227 128 48 31 chr5 34391949 34392307 -165237843 - THE1B LTR MaLR 0 364 1 2540 243 46 57 chr5 34392307 34393399 -165236751 - L1ME2 LINE L1 -4588 2510 1478 679 335 42 38 chr5 34393549 34393976 -165236174 - L1M3c LINE L1 -5710 431 3 282 206 0 0 chr5 34394624 34394687 -165235463 + (CA)n Simple_repeat Simple_repeat 2 64 0 22 0 0 0 chr5 34395794 34395816 -165234334 + AT_rich Low_complexity Low_complexity 1 22 0 2483 106 22 11 chr5 34395945 34396305 -165233845 - THE1B LTR MaLR 0 364 1 1588 190 54 12 chr5 34396662 34396993 -165233157 + MLT1A1 LTR MaLR 10 354 -11 225 65 0 0 chr5 34397190 34397221 -165232929 + (GA)n Simple_repeat Simple_repeat 2 32 0 2054 257 50 10 chr5 34398257 34398351 -165231799 - L1ME1 LINE L1 -4 6162 6073 2838 135 2 21 chr5 34398351 34398787 -165231363 - MSTA LTR MaLR 0 428 1 2054 257 50 10 chr5 34398787 34399271 -165230879 - L1ME1 LINE L1 -93 6073 5561 852 243 67 67 chr5 34399296 34399498 -165230652 + L1ME LINE L1 5008 5208 -958 4441 167 9 14 chr5 34399498 34400284 -165229866 + LTR39 LTR ERV1 2 783 0 852 243 67 67 chr5 34400284 34400605 -165229545 + L1ME LINE L1 5208 5529 -637 205 270 18 0 chr5 34400863 34400974 -165229176 + GA-rich Low_complexity Low_complexity 1 113 0 23 54 0 0 chr5 34401980 34402017 -165228133 + AT_rich Low_complexity Low_complexity 1 37 0 225 253 81 35 chr5 34402252 34402339 -165227811 + MIR SINE MIR 74 164 -98 851 143 0 0 chr5 34402940 34403066 -165227084 - FLAM_C SINE Alu -7 136 11 303 282 36 18 chr5 34404002 34404112 -165226038 + HAL1 LINE L1 961 1072 -1435 216 0 0 0 chr5 34404509 34404533 -165225617 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1664 196 0 14 chr5 34404536 34404822 -165225328 - AluJo SINE Alu -30 282 1 22 0 0 0 chr5 34405523 34405545 -165224605 + AT_rich Low_complexity Low_complexity 1 22 0 367 286 0 0 chr5 34406011 34406095 -165224055 + MLT1D LTR MaLR 8 91 -414 244 318 77 53 chr5 34406162 34406332 -165223818 + L2 LINE L2 3102 3275 -38 22 0 0 0 chr5 34406375 34406397 -165223753 + AT_rich Low_complexity Low_complexity 1 22 0 33 25 0 0 chr5 34406602 34406642 -165223508 + AT_rich Low_complexity Low_complexity 1 40 0 25 51 0 0 chr5 34406879 34406918 -165223232 + AT_rich Low_complexity Low_complexity 1 39 0 350 246 222 33 chr5 34406918 34407263 -165222887 + L1MC/D LINE L1 5322 5727 -480 880 108 24 12 chr5 34407263 34407430 -165222720 + GA-rich Low_complexity Low_complexity 3 171 0 211 306 16 0 chr5 34408611 34408673 -165221477 + MIR SINE MIR 78 140 -122 350 349 63 66 chr5 34408685 34409017 -165221133 - L2 LINE L2 -10 3262 2932 2281 110 0 13 chr5 34409186 34409495 -165220655 + AluSx SINE Alu 1 305 -7 285 292 172 82 chr5 34409719 34410010 -165220140 + L3 LINE CR1 1054 1370 -207 1160 333 62 27 chr5 34410143 34411068 -165219082 + L1MEc LINE L1 75 1031 -5365 8266 126 7 2 chr5 34411069 34412280 -165217870 + L1PA12 LINE L1 1493 2709 -4872 204 200 0 0 chr5 34412283 34412328 -165217822 + (TA)n Simple_repeat Simple_repeat 1 45 0 303 287 73 49 chr5 34412335 34412499 -165217651 + L1MC4 LINE L1 6579 6746 -1296 2403 232 21 10 chr5 34412503 34413110 -165217040 + L1PA11 LINE L1 2024 2637 -4212 1916 161 19 26 chr5 34413110 34413488 -165216662 + THE1C LTR MaLR 1 375 0 2931 104 109 8 chr5 34413488 34413957 -165216193 + THE1C-int LTR MaLR 1 516 -1064 5352 209 9 2 chr5 34413958 34415114 -165215036 + L1PA11 LINE L1 2821 3985 -2864 631 224 39 0 chr5 34415173 34415329 -165214821 - L1MA4 LINE L1 -4 6296 6135 6133 6 0 0 chr5 34415353 34416039 -165214111 - L1PA2 LINE L1 -1 6154 5469 715 145 48 7 chr5 34416039 34416184 -165213966 - L1MA4 LINE L1 -135 6165 6015 3031 262 67 58 chr5 34416188 34417590 -165212560 + L1M4 LINE L1 2245 3670 -2476 1879 199 52 40 chr5 34417590 34418087 -165212063 - MLT1D LTR MaLR 0 505 3 3031 262 67 58 chr5 34418087 34418532 -165211618 + L1M4 LINE L1 3670 4109 -2037 5945 150 25 0 chr5 34418537 34420334 -165209816 + L1PA11 LINE L1 5061 6876 -1 961 236 93 3 chr5 34420339 34420640 -165209510 + L1ME2 LINE L1 5828 6155 -9 2145 111 7 3 chr5 34420666 34420963 -165209187 + AluSq SINE Alu 1 298 -15 24 0 0 0 chr5 34421151 34421175 -165208975 + AT_rich Low_complexity Low_complexity 1 24 0 330 206 33 87 chr5 34421329 34421421 -165208729 - L1ME1 LINE L1 -68 6098 6012 359 23 0 0 chr5 34421439 34421482 -165208668 - MADE1 DNA Mariner -35 45 3 198 193 0 0 chr5 34421484 34421541 -165208609 + (TA)n Simple_repeat Simple_repeat 2 58 0 1043 311 102 78 chr5 34422348 34423092 -165207058 + L3 LINE CR1 472 1244 -333 953 324 30 34 chr5 34423092 34423558 -165206592 - LTR16B LTR ERVL 0 464 1 1043 311 102 78 chr5 34423558 34423736 -165206414 + L3 LINE CR1 1244 1416 -161 2147 97 0 7 chr5 34424205 34424515 -165205635 - L1P LINE L1 -1378 4768 4461 2580 82 6 6 chr5 34424515 34424866 -165205284 + L1PA8 LINE L1 5818 6171 -1 27 29 0 0 chr5 34426691 34426725 -165203425 + AT_rich Low_complexity Low_complexity 1 34 0 2348 94 0 16 chr5 34426945 34427252 -165202898 - AluSg SINE Alu -7 303 2 273 182 45 136 chr5 34427726 34427858 -165202292 + MLT1L LTR MaLR 217 336 -279 211 381 69 11 chr5 34428334 34428523 -165201627 + L2 LINE L2 2775 2974 -340 233 374 22 0 chr5 34428734 34428825 -165201325 + L2 LINE L2 3216 3308 -5 9472 194 21 16 chr5 34429595 34430428 -165199722 - L1PA15 LINE L1 -4 6161 5334 2192 113 0 0 chr5 34430428 34430721 -165199429 - AluSg SINE Alu -17 293 1 9472 194 21 16 chr5 34430721 34431428 -165198722 - L1PA15 LINE L1 -831 5334 4632 2051 144 5 44 chr5 34431428 34431817 -165198333 + THE1C LTR MaLR 2 375 0 9472 194 21 16 chr5 34431817 34433117 -165197033 - L1PA15 LINE L1 -1533 4632 3304 454 116 52 12 chr5 34433191 34433363 -165196787 + (TA)n Simple_repeat Simple_repeat 1 179 0 21 0 0 0 chr5 34433556 34433577 -165196573 + AT_rich Low_complexity Low_complexity 1 21 0 2382 85 3 0 chr5 34433903 34434197 -165195953 + AluSg SINE Alu 2 296 -14 1235 257 22 19 chr5 34435323 34435638 -165194512 - MLT1E LTR MaLR -69 524 209 384 190 0 0 chr5 34435644 34435723 -165194427 + CT-rich Low_complexity Low_complexity 1 79 0 498 239 44 9 chr5 34435728 34435841 -165194309 - MLT1E LTR MaLR -391 202 86 328 331 78 35 chr5 34436011 34436342 -165193808 - L2 LINE L2 -224 3048 2712 3012 195 39 60 chr5 34436364 34437114 -165193036 + L1MD2 LINE L1 5606 6339 -20 220 369 39 0 chr5 34437152 34437255 -165192895 - L2 LINE L2 -656 2658 2552 415 257 76 35 chr5 34438428 34438551 -165191599 + MER5B DNA MER1_type 1 134 -44 243 61 0 0 chr5 34438551 34438584 -165191566 + (TTA)n Simple_repeat Simple_repeat 1 33 0 415 257 76 35 chr5 34438584 34438631 -165191519 + MER5B DNA MER1_type 134 178 0 2389 85 0 0 chr5 34440420 34440715 -165189435 + AluSg SINE Alu 1 295 -15 515 252 67 7 chr5 34440975 34441222 -165188928 + L1ME LINE L1 5572 5781 -340 1654 182 7 3 chr5 34441358 34441649 -165188501 + AluJo SINE Alu 3 294 -18 5375 161 21 9 chr5 34442034 34443133 -165187017 + L1MA8 LINE L1 5101 6214 -77 212 303 232 26 chr5 34443155 34443422 -165186728 + L2 LINE L2 2447 2768 -546 674 177 0 48 chr5 34443811 34443935 -165186215 + FLAM_C SINE Alu 1 118 -25 239 148 45 0 chr5 34443937 34444025 -165186125 + (TA)n Simple_repeat Simple_repeat 1 92 0 335 208 0 78 chr5 34444028 34444105 -165186045 + FLAM SINE Alu 50 120 -13 1049 88 0 22 chr5 34444113 34444295 -165185855 + (TA)n Simple_repeat Simple_repeat 1 178 0 3490 82 4 0 chr5 34444756 34445234 -165184916 - L1PA7 LINE L1 0 6154 5675 30 0 0 0 chr5 34445288 34445318 -165184832 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr5 34445666 34445702 -165184448 + AT_rich Low_complexity Low_complexity 1 36 0 242 270 48 0 chr5 34446490 34446553 -165183597 - L2 LINE L2 -9 3304 3239 2284 114 7 0 chr5 34447031 34447339 -165182811 - AluSg SINE Alu 0 310 1 421 231 88 112 chr5 34448060 34448355 -165181795 - MLT1I LTR MaLR -93 316 29 28 29 0 0 chr5 34448539 34448574 -165181576 + AT_rich Low_complexity Low_complexity 1 35 0 373 360 70 19 chr5 34448940 34449154 -165180996 + L3 LINE CR1 953 1177 -400 393 22 0 0 chr5 34450049 34450095 -165180055 + (ATTAG)n Simple_repeat Simple_repeat 4 49 0 2161 41 60 0 chr5 34450229 34450531 -165179619 - AluY SINE Alu 0 318 1 272 324 150 45 chr5 34451011 34451441 -165178709 - L2 LINE L2 -673 2641 2258 2565 55 0 0 chr5 34451441 34451752 -165178398 + AluY SINE Alu 1 311 0 272 324 150 45 chr5 34451752 34452213 -165177937 - L2 LINE L2 -1056 2258 1656 2667 55 0 0 chr5 34452447 34452759 -165177391 + AluSp SINE Alu 1 312 -1 260 286 98 74 chr5 34453629 34454641 -165175509 + L1M4 LINE L1 2749 3735 -2411 623 226 0 0 chr5 34454641 34454798 -165175352 + FLAM_A SINE Alu 2 158 0 260 286 98 74 chr5 34454798 34455425 -165174725 + L1M4 LINE L1 3735 4346 -1800 1736 175 0 23 chr5 34455425 34455733 -165174417 + AluJb SINE Alu 1 301 -11 260 286 98 74 chr5 34455733 34456274 -165173876 + L1M4 LINE L1 4346 4983 -1163 2257 211 160 57 chr5 34456341 34456438 -165173712 + L1MDa LINE L1 2 88 -6452 2868 102 23 16 chr5 34456438 34456514 -165173636 + L1PB1 LINE L1 5706 5780 -371 954 27 41 0 chr5 34456514 34456660 -165173490 + (TAGA)n Simple_repeat Simple_repeat 1 152 0 2868 102 23 16 chr5 34456660 34457026 -165173124 + L1PB1 LINE L1 5780 6151 0 2257 211 160 57 chr5 34457026 34457721 -165172429 + L1MDa LINE L1 88 876 -5664 1261 209 141 15 chr5 34457759 34458213 -165171937 + L1MDa LINE L1 1210 1720 -4820 285 373 22 0 chr5 34458395 34458529 -165171621 - MLT1K LTR MaLR -295 293 157 463 299 133 50 chr5 34460515 34460793 -165169357 - L2 LINE L2 -1 3312 3012 339 342 52 19 chr5 34460987 34461142 -165169008 - MIR SINE MIR -79 183 24 696 189 41 18 chr5 34462029 34462065 -165168085 - MER3 DNA MER1_type -35 127 93 1653 176 13 20 chr5 34462065 34462366 -165167784 + AluJo SINE Alu 5 303 -9 696 189 41 18 chr5 34462366 34462498 -165167652 - MER3 DNA MER1_type -69 93 2 249 284 37 55 chr5 34462651 34462760 -165167390 - MIR3 SINE MIR -9 199 93 * 680 290 82 90 chr5 34462758 34463244 -165166906 - L2 LINE L2 -3 3310 2822 1083 246 98 89 chr5 34463244 34463826 -165166324 - MLT1E LTR MaLR -3 590 4 680 290 82 90 chr5 34463826 34463881 -165166269 - L2 LINE L2 -491 2822 2768 1721 189 16 22 chr5 34463881 34464193 -165165957 + AluJb SINE Alu 1 310 -2 680 290 82 90 chr5 34464193 34464487 -165165663 - L2 LINE L2 -545 2768 2472 213 121 0 0 chr5 34465716 34465749 -165164401 + (GA)n Simple_repeat Simple_repeat 2 34 0 1879 193 10 56 chr5 34465914 34466324 -165163826 - MSTD LTR MaLR 0 396 6 184 330 110 11 chr5 34466335 34466426 -165163724 - MIR SINE MIR -87 121 22 22 35 0 0 chr5 34468142 34468171 -165161979 + AT_rich Low_complexity Low_complexity 1 29 0 240 325 31 62 chr5 34469353 34469513 -165160637 + L2 LINE L2 2550 2704 -610 289 304 45 54 chr5 34469566 34469790 -165160360 + L2 LINE L2 2836 3057 -215 583 94 21 0 chr5 34469995 34470091 -165160059 + (TAGA)n Simple_repeat Simple_repeat 4 101 0 897 118 7 78 chr5 34470995 34471148 -165159002 + AluSg/x SINE Alu 138 279 -31 387 316 22 0 chr5 34473957 34474093 -165156057 - MER69A DNA AcHobo 0 177 39 42667 36 1 1 chr5 34474179 34480335 -165149815 + L1PA3 LINE L1 4 6154 -1 28 71 0 0 chr5 34480427 34480483 -165149667 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr5 34480514 34480537 -165149613 + AT_rich Low_complexity Low_complexity 1 23 0 780 318 159 10 chr5 34481414 34481810 -165148340 + L2 LINE L2 803 1257 -2057 3389 306 87 32 chr5 34482227 34483398 -165146752 + L2 LINE L2 1269 2593 -720 1754 172 0 36 chr5 34483398 34483706 -165146444 + AluJb SINE Alu 1 297 -15 3389 306 87 32 chr5 34483706 34484458 -165145692 + L2 LINE L2 2593 3302 -11 221 215 46 0 chr5 34484465 34484530 -165145620 + (TTGGGG)n Simple_repeat Simple_repeat 5 72 0 24 53 0 0 chr5 34486992 34487030 -165143120 + AT_rich Low_complexity Low_complexity 1 38 0 2169 107 67 17 chr5 34487997 34488353 -165141797 + THE1C LTR MaLR 1 374 -1 231 146 0 0 chr5 34488809 34488850 -165141300 + (ATG)n Simple_repeat Simple_repeat 2 42 0 2148 136 36 28 chr5 34491986 34492347 -165137803 - THE1B LTR MaLR 0 364 1 2077 135 3 22 chr5 34493424 34493742 -165136408 - AluSx SINE Alu 0 312 1 1004 198 0 0 chr5 34494265 34494442 -165135708 + MER45A DNA AcHobo 2 178 0 1743 122 11 36 chr5 34494793 34495071 -165135079 + AluSg SINE Alu 30 300 -10 21 36 0 0 chr5 34496311 34496339 -165133811 + AT_rich Low_complexity Low_complexity 1 28 0 228 315 34 0 chr5 34497398 34497487 -165132663 + Charlie7 DNA MER1_type 5 96 -2516 1710 164 46 9 chr5 34498713 34499042 -165131108 + MER58B DNA MER1_type 1 341 0 290 371 88 34 chr5 34499758 34500052 -165130098 + L2 LINE L2 2943 3252 -20 201 39 0 0 chr5 34500292 34500318 -165129832 + (TC)n Simple_repeat Simple_repeat 2 27 0 360 59 0 0 chr5 34500441 34500492 -165129658 + (TTGG)n Simple_repeat Simple_repeat 2 52 0 2303 88 0 0 chr5 34500492 34500777 -165129373 - AluSq SINE Alu -28 285 1 218 222 0 0 chr5 34501241 34501286 -165128864 + (TTA)n Simple_repeat Simple_repeat 2 46 0 398 316 19 26 chr5 34501313 34501468 -165128682 - MIR SINE MIR -72 190 37 314 251 123 103 chr5 34501523 34501766 -165128384 - MIR SINE MIR -5 257 10 287 286 97 61 chr5 34501787 34501983 -165128167 + MIR SINE MIR 41 243 -19 1027 175 34 0 chr5 34502242 34502448 -165127702 + MER20 DNA MER1_type 7 219 0 203 218 119 89 chr5 34503074 34503175 -165126975 + MIR3 SINE MIR 101 204 -4 21 36 0 0 chr5 34503648 34503676 -165126474 + AT_rich Low_complexity Low_complexity 1 28 0 486 120 0 0 chr5 34503708 34503783 -165126367 + (CAGA)n Simple_repeat Simple_repeat 2 76 0 921 228 55 14 chr5 34503938 34504157 -165125993 + MIR SINE MIR 6 233 -29 483 60 0 0 chr5 34504538 34504605 -165125545 + (TC)n Simple_repeat Simple_repeat 2 68 0 22 0 0 0 chr5 34505212 34505234 -165124916 + AT_rich Low_complexity Low_complexity 1 22 0 206 344 44 0 chr5 34506117 34506207 -165123943 + MIR3 SINE MIR 109 202 -6 29 28 0 0 chr5 34506363 34506399 -165123751 + AT_rich Low_complexity Low_complexity 1 36 0 183 42 0 0 chr5 34509096 34509120 -165121030 + (AATTG)n Simple_repeat Simple_repeat 5 28 0 2325 64 0 3 chr5 34510318 34510613 -165119537 + AluY SINE Alu 1 294 -17 2217 80 37 0 chr5 34511321 34511620 -165118530 + AluSg SINE Alu 1 310 0 688 226 32 16 chr5 34511896 34512082 -165118068 - MER53 DNA DNA 0 189 1 619 209 43 66 chr5 34512398 34512507 -165117643 + MER96B DNA MER1_type? 1 104 -313 3909 142 29 18 chr5 34512507 34513188 -165116962 - L1MC1 LINE L1 -6 6327 5639 619 209 43 66 chr5 34513188 34513289 -165116861 + MER96B DNA MER1_type? 104 206 -211 288 337 24 0 chr5 34513549 34513632 -165116518 + MER91B DNA MER1_type 100 184 -6 3683 189 69 5 chr5 34513924 34514692 -165115458 - Tigger6a DNA MER2_type -265 818 2 477 0 0 0 chr5 34515908 34515961 -165114189 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 318 403 19 13 chr5 34516104 34516258 -165113892 + MIR3 SINE MIR 35 189 -19 352 301 111 13 chr5 34516483 34516636 -165113514 - MIR SINE MIR -6 256 89 562 259 7 22 chr5 34517589 34517728 -165112422 + MLT2F LTR ERVL 1 137 -526 623 185 7 75 chr5 34517740 34517886 -165112264 + MLT1E3 LTR MaLR 55 190 -434 325 258 49 28 chr5 34518016 34518211 -165111939 + MLT2F LTR ERVL 222 663 0 751 324 47 52 chr5 34518254 34518849 -165111301 + Charlie7 DNA MER1_type 21 612 -2000 206 125 0 25 chr5 34518858 34518898 -165111252 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 33 0 0 0 chr5 34518953 34518986 -165111164 + AT_rich Low_complexity Low_complexity 1 33 0 30 69 0 0 chr5 34519033 34519091 -165111059 + AT_rich Low_complexity Low_complexity 1 58 0 457 247 57 46 chr5 34519505 34519699 -165110451 + MLT1J LTR MaLR 309 504 -7 23 0 0 0 chr5 34519718 34519741 -165110409 + AT_rich Low_complexity Low_complexity 1 23 0 6708 16 3 0 chr5 34519820 34520593 -165109557 - L1PA3 LINE L1 0 6155 5381 341 288 77 86 chr5 34520598 34520831 -165109319 - L1MC4a LINE L1 -1983 5825 5595 209 356 171 0 chr5 34520947 34521093 -165109057 - L3 LINE CR1 -341 1236 1066 1031 209 15 0 chr5 34521113 34521309 -165108841 - MER58A DNA MER1_type -15 209 11 190 244 89 0 chr5 34521411 34521456 -165108694 + L2 LINE L2 3224 3272 0 408 271 54 30 chr5 34521854 34522020 -165108130 - MIR SINE MIR -17 245 76 638 264 113 43 chr5 34522133 34522579 -165107571 - MLT1G3 LTR MaLR -57 492 12 23 0 0 0 chr5 34522588 34522611 -165107539 + AT_rich Low_complexity Low_complexity 1 23 0 250 257 55 64 chr5 34522621 34522730 -165107420 - MLT1J2 LTR MaLR -59 391 284 198 222 69 28 chr5 34524021 34524093 -165106057 - L2 LINE L2 -676 2638 2564 363 60 0 0 chr5 34524481 34524531 -165105619 + (TG)n Simple_repeat Simple_repeat 1 50 0 2294 126 26 2 chr5 34525523 34526104 -165104046 - L1PA15 LINE L1 -1 6164 5504 1387 147 27 5 chr5 34526103 34526503 -165103647 + L1PA15 LINE L1 5082 5491 -674 * 4730 98 42 0 chr5 34526910 34527593 -165102557 - L1PA10 LINE L1 -12 6156 5445 440 216 9 18 chr5 34528008 34528119 -165102031 + L1MA10 LINE L1 6218 6327 -7 23 54 0 0 chr5 34528124 34528161 -165101989 + AT_rich Low_complexity Low_complexity 1 37 0 733 268 22 26 chr5 34529271 34529502 -165100648 - MIR SINE MIR -5 257 28 289 276 58 35 chr5 34529699 34529786 -165100364 - L2 LINE L2 -33 3239 3151 22 0 0 0 chr5 34530364 34530386 -165099764 + AT_rich Low_complexity Low_complexity 1 22 0 1322 174 80 11 chr5 34531728 34531992 -165098158 + AluJo SINE Alu 1 282 -30 480 111 0 0 chr5 34532013 34532085 -165098065 + (TA)n Simple_repeat Simple_repeat 1 72 0 297 352 78 17 chr5 34533023 34533202 -165096948 - MIR SINE MIR -16 246 57 403 240 89 113 chr5 34533273 34533565 -165096585 - LTR33A LTR ERVL -13 510 226 371 364 7 13 chr5 34534034 34534188 -165095962 - LTR33 LTR ERVL -339 182 30 529 300 87 41 chr5 34534738 34534888 -165095262 + L2 LINE L2 2602 2744 -528 2227 109 7 0 chr5 34534888 34535182 -165094968 + AluSx SINE Alu 1 296 -16 529 300 87 41 chr5 34535182 34535503 -165094647 + L2 LINE L2 2744 3086 -186 303 280 122 28 chr5 34535566 34535780 -165094370 - L2 LINE L2 -825 2489 2256 215 311 41 16 chr5 34535889 34536011 -165094139 + L2 LINE L2 2152 2276 -1038 205 213 213 0 chr5 34536907 34536968 -165093182 + L2 LINE L2 3231 3304 -9 4453 95 9 15 chr5 34538270 34538952 -165091198 + L1PB2 LINE L1 5474 6151 0 1159 235 71 10 chr5 34540044 34540338 -165089812 + L1MD2 LINE L1 5977 6288 -71 567 228 108 12 chr5 34540579 34540746 -165089404 + MER5A DNA MER1_type 7 189 0 22 0 0 0 chr5 34541659 34541681 -165088469 + AT_rich Low_complexity Low_complexity 1 22 0 2190 109 3 10 chr5 34541874 34542185 -165087965 + AluSc SINE Alu 1 309 0 21 71 0 0 chr5 34542413 34542455 -165087695 + AT_rich Low_complexity Low_complexity 1 42 0 279 281 184 18 chr5 34542832 34542946 -165087204 - L2 LINE L2 0 3313 3181 292 242 22 22 chr5 34542947 34543038 -165087112 + MER69A DNA AcHobo 3 93 -84 2865 186 13 45 chr5 34543044 34543646 -165086504 - MER6A DNA MER2_type -22 583 1 387 238 12 0 chr5 34543646 34543728 -165086422 + MER69A DNA AcHobo 92 174 -3 299 167 0 28 chr5 34544215 34544287 -165085863 + (CATATA)n Simple_repeat Simple_repeat 4 73 0 2629 42 0 3 chr5 34544455 34544763 -165085387 + AluY SINE Alu 1 307 -4 213 39 0 0 chr5 34544980 34545006 -165085144 + (TG)n Simple_repeat Simple_repeat 2 27 0 1338 170 112 8 chr5 34545006 34545265 -165084885 - AluJb SINE Alu -26 286 1 2219 92 0 3 chr5 34545342 34545634 -165084516 + AluSc SINE Alu 1 291 -18 17620 109 36 22 chr5 34546271 34547655 -165082495 - Charlie3 DNA MER1_type -1 2705 1268 1559 114 5 0 chr5 34547655 34547866 -165082284 + AluSg SINE Alu 1 212 -98 17620 109 36 22 chr5 34547866 34549148 -165081002 - Charlie3 DNA MER1_type -1438 1268 4 313 40 100 0 chr5 34549916 34549966 -165080184 + AluY SINE Alu 245 299 -1 25 65 0 0 chr5 34550062 34550108 -165080042 + AT_rich Low_complexity Low_complexity 1 46 0 3115 166 6 36 chr5 34550639 34551273 -165078877 + L1MB2 LINE L1 5549 6163 -8 284 71 0 0 chr5 34551300 34551342 -165078808 - AluSq SINE Alu -2 300 259 1484 77 0 0 chr5 34551344 34551526 -165078624 - AluSq SINE Alu -131 182 1 22 0 0 0 chr5 34551526 34551548 -165078602 + AT_rich Low_complexity Low_complexity 1 22 0 606 293 112 5 chr5 34551837 34552052 -165078098 - MIR SINE MIR -2 260 23 314 303 46 7 chr5 34552613 34552765 -165077385 + MER103 DNA DNA 2 159 -7 1301 224 45 25 chr5 34553551 34553909 -165076241 + MLT1A1 LTR MaLR 1 365 0 232 256 134 12 chr5 34554019 34554101 -165076049 + MLT1J1 LTR MaLR 16 107 -339 280 250 188 0 chr5 34554394 34554490 -165075660 + MIR3 SINE MIR 47 160 -48 25 65 0 0 chr5 34555458 34555504 -165074646 + AT_rich Low_complexity Low_complexity 1 46 0 279 234 73 95 chr5 34556231 34556260 -165073890 + MLT1E1 LTR MaLR 1 29 -625 2165 132 10 44 chr5 34556260 34556647 -165073503 - THE1C LTR MaLR -1 374 1 279 234 73 95 chr5 34556647 34556754 -165073396 + MLT1E1 LTR MaLR 29 134 -520 510 225 12 62 chr5 34559765 34559867 -165070283 + L1MCa LINE L1 5 98 -6328 2251 89 0 36 chr5 34559867 34560170 -165069980 + AluSp SINE Alu 1 292 -21 510 225 12 62 chr5 34560170 34560227 -165069923 + L1MCa LINE L1 98 156 -6270 3802 204 29 35 chr5 34560256 34561802 -165068348 + L1MA8 LINE L1 4726 6266 -25 1471 212 22 19 chr5 34561837 34562196 -165067954 + L1MC1 LINE L1 5958 6317 -16 3523 211 32 22 chr5 34562204 34563833 -165066317 + L1PB1 LINE L1 4127 5766 -388 898 169 19 0 chr5 34563836 34563990 -165066160 + L1PB1 LINE L1 9 165 -7416 2504 58 0 3 chr5 34563993 34564302 -165065848 + AluY SINE Alu 1 308 -3 378 96 64 85 chr5 34564302 34564396 -165065754 + L1PB1 LINE L1 5736 5827 -324 4398 269 30 31 chr5 34564403 34565673 -165064477 + L1PB1 LINE L1 155 2478 -5106 590 219 12 69 chr5 34565885 34566022 -165064128 + L1PB1 LINE L1 2450 2564 -5020 2931 28 0 0 chr5 34566022 34566345 -165063805 + L1PA2 LINE L1 5828 6150 -5 590 219 12 69 chr5 34566345 34566466 -165063684 + L1PB1 LINE L1 2564 2690 -4894 13700 190 22 32 chr5 34566473 34567243 -165062907 + L1PB1 LINE L1 3950 4726 -2863 2346 75 14 3 chr5 34567243 34567538 -165062612 + AluSc SINE Alu 1 298 -11 13700 190 22 32 chr5 34567538 34569964 -165060186 + L1PB1 LINE L1 4726 7175 -414 2481 85 0 0 chr5 34569964 34570269 -165059881 + AluY SINE Alu 1 305 -6 13700 190 22 32 chr5 34570269 34570331 -165059819 + L1PB1 LINE L1 7175 7236 -353 279 0 0 0 chr5 34570331 34570362 -165059788 + (TG)n Simple_repeat Simple_repeat 2 32 0 13700 190 22 32 chr5 34570362 34570725 -165059425 + L1PB1 LINE L1 7236 7584 -5 2142 172 16 3 chr5 34570750 34571123 -165059027 + L1PB3 LINE L1 5769 6146 -8 22 56 0 0 chr5 34571126 34571162 -165058988 + AT_rich Low_complexity Low_complexity 1 36 0 346 189 0 0 chr5 34571307 34571381 -165058769 + L1PB3 LINE L1 6081 6154 0 334 281 59 22 chr5 34572072 34572207 -165057943 + MLT1E3 LTR MaLR 155 294 -330 2232 85 11 0 chr5 34573571 34573890 -165056260 - AluY SINE Alu 0 322 1 2238 79 11 0 chr5 34573892 34574172 -165055978 - AluSc SINE Alu -15 294 12 542 295 110 27 chr5 34574656 34575155 -165054995 + Charlie2a DNA MER1_type 1662 2280 -582 2054 141 13 0 chr5 34575574 34575879 -165054271 + AluSx SINE Alu 1 309 -3 495 166 0 35 chr5 34575882 34576051 -165054099 + G-rich Low_complexity Low_complexity 2 164 0 398 103 29 0 chr5 34576054 34576122 -165054028 + GA-rich Low_complexity Low_complexity 2 71 0 247 248 50 74 chr5 34579304 34579425 -165050725 - MLT1E1 LTR MaLR -335 289 172 347 242 55 23 chr5 34579456 34579584 -165050566 - MLT1E1 LTR MaLR -522 132 1 447 242 0 0 chr5 34580479 34580570 -165049580 + AluSg/x SINE Alu 202 292 -17 349 236 11 11 chr5 34580728 34580817 -165049333 + L1P5 LINE L1 81 169 -6694 3551 174 18 3 chr5 34580841 34581507 -165048643 + L1P5 LINE L1 1392 2067 -4796 10926 191 10 26 chr5 34581509 34583613 -165046537 + L1P5 LINE L1 3606 5650 -1217 2328 94 7 0 chr5 34583613 34583921 -165046229 - AluY SINE Alu -1 310 1 10926 191 10 26 chr5 34583921 34584583 -165045567 + L1P5 LINE L1 5650 6322 -545 1207 247 36 4 chr5 34585160 34585439 -165044711 + AluJb SINE Alu 1 288 -14 294 322 41 14 chr5 34586299 34586445 -165043705 + L1MCa LINE L1 6 155 -6271 4240 206 41 24 chr5 34586482 34587991 -165042159 + L1MA8 LINE L1 4731 6266 -25 1280 260 15 5 chr5 34588016 34588377 -165041773 + L1MC1 LINE L1 5960 6316 -17 215 146 62 0 chr5 34588538 34588586 -165041564 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 566 259 134 70 chr5 34589305 34589664 -165040486 + Charlie2a DNA MER1_type 1896 2277 -585 5198 103 13 3 chr5 34590354 34591059 -165039091 + L1PA8 LINE L1 5459 6170 -2 268 222 167 48 chr5 34593810 34593936 -165036214 - MLT1E3 LTR MaLR 0 624 484 394 308 8 0 chr5 34594155 34594285 -165035865 + Charlie2a DNA MER1_type 1896 2026 -836 482 244 89 69 chr5 34596181 34596542 -165033608 - MLT1E3 LTR MaLR 0 624 257 261 268 41 0 chr5 34596667 34596764 -165033386 - MLT1E3 LTR MaLR -547 107 7 1669 167 0 30 chr5 34596977 34597296 -165032854 - AluSx SINE Alu 0 312 3 807 148 8 0 chr5 34597520 34597648 -165032502 + AluSq/x SINE Alu 1 129 -184 272 195 153 17 chr5 34598008 34598126 -165032024 + Charlie7 DNA MER1_type 23 156 -2456 1591 195 3 0 chr5 34598192 34598474 -165031676 + AluJb SINE Alu 1 283 -29 22 0 0 0 chr5 34598881 34598903 -165031247 + AT_rich Low_complexity Low_complexity 1 22 0 3897 185 33 35 chr5 34599499 34600472 -165029678 + L1PB3 LINE L1 5157 6127 -27 356 214 34 11 chr5 34600675 34600764 -165029386 + L1PB3 LINE L1 6064 6154 0 2090 131 0 7 chr5 34601183 34601480 -165028670 - AluSc SINE Alu -14 295 1 1252 233 0 24 chr5 34603572 34603864 -165026286 + AluJb SINE Alu 5 289 -23 4007 203 27 51 chr5 34604729 34605998 -165024152 + L1MA8 LINE L1 5032 6265 -26 1194 270 13 18 chr5 34606017 34606402 -165023748 + L1MC1 LINE L1 5946 6328 -5 1092 280 10 14 chr5 34608461 34608750 -165021400 + AluJb SINE Alu 1 288 -14 296 356 27 0 chr5 34609618 34609764 -165020386 + L1MCa LINE L1 6 155 -6271 4588 198 38 24 chr5 34609801 34611311 -165018839 + L1MA8 LINE L1 4731 6266 -25 1336 269 12 7 chr5 34611337 34611728 -165018422 + L1MC1 LINE L1 5961 6343 -1 181 75 50 25 chr5 34611877 34611917 -165018233 + (TTTG)n Simple_repeat Simple_repeat 3 43 0 4932 101 7 0 chr5 34613820 34614532 -165015618 + L1PA8 LINE L1 5456 6172 0 594 248 124 58 chr5 34617281 34617709 -165012441 - MLT1E3 LTR MaLR 0 624 169 293 276 38 0 chr5 34617762 34617867 -165012283 - MLT1E3 LTR MaLR -545 109 1 200 83 0 28 chr5 34618053 34618089 -165012061 + (TTTTA)n Simple_repeat Simple_repeat 4 38 0 1732 157 0 14 chr5 34618091 34618384 -165011766 - AluSx SINE Alu -21 291 3 431 319 6 0 chr5 34618676 34618836 -165011314 + Charlie2 DNA MER1_type 1911 2071 -791 1840 136 7 0 chr5 34619459 34619738 -165010412 + AluY SINE Alu 1 281 -30 4852 107 8 0 chr5 34619992 34620700 -165009450 + L1PA8 LINE L1 5459 6172 0 1568 177 4 4 chr5 34621602 34621862 -165008288 + AluSq SINE Alu 1 260 -53 1484 104 13 39 chr5 34622438 34622668 -165007482 + THE1B LTR MaLR 52 275 -89 518 156 33 0 chr5 34622706 34622796 -165007354 - Tigger3(Golem) DNA MER2_type -52 2977 2885 305 115 0 42 chr5 34622808 34622904 -165007246 + (TA)n Simple_repeat Simple_repeat 2 93 0 549 46 92 0 chr5 34622906 34622993 -165007157 - Tigger3(Golem) DNA MER2_type -164 2865 2771 486 201 27 134 chr5 34622990 34623053 -165007097 - Tigger3(Golem) DNA MER2_type -1089 142 103 * 2194 101 14 0 chr5 34623053 34623349 -165006801 - AluSp SINE Alu -13 300 1 486 201 27 134 chr5 34623349 34623434 -165006716 - Tigger3(Golem) DNA MER2_type -1128 103 10 236 139 0 0 chr5 34623461 34623497 -165006653 + MLT2C1 LTR ERVL 351 386 -11 188 340 100 10 chr5 34624775 34624875 -165005275 + MIR SINE MIR 32 140 -68 12283 176 35 67 chr5 34625582 34628705 -165001445 - L1PB1 LINE L1 -1 6866 3644 1325 108 98 0 chr5 34628705 34628909 -165001241 - AluSp SINE Alu -4 309 86 12283 176 35 67 chr5 34628909 34632639 -164997511 - L1PB1 LINE L1 -3223 3644 53 1269 157 4 4 chr5 34633900 34634148 -164996002 + L1MA4 LINE L1 6044 6291 -9 27 0 0 0 chr5 34634150 34634177 -164995973 + AT_rich Low_complexity Low_complexity 1 27 0 2855 202 53 90 chr5 34634594 34635504 -164994646 + L1MB8 LINE L1 5291 6166 -12 2031 177 51 17 chr5 34635585 34635997 -164994153 + MSTB LTR MaLR 1 426 0 187 120 20 20 chr5 34637118 34637168 -164992982 + (TA)n Simple_repeat Simple_repeat 1 50 0 1099 318 6 8 chr5 34638561 34638919 -164991231 + L1MCb LINE L1 7 363 -5682 2237 66 15 0 chr5 34639477 34639749 -164990401 + AluSq SINE Alu 38 313 0 876 206 4 79 chr5 34641144 34641314 -164988836 + MER20 DNA MER1_type 3 153 -66 2257 196 75 14 chr5 34641314 34641757 -164988393 + MER70A LTR ERVL 3 472 0 876 206 4 79 chr5 34641757 34641814 -164988336 + MER20 DNA MER1_type 153 213 -6 269 346 74 29 chr5 34642191 34642503 -164987647 + L2 LINE L2 1836 2161 -1153 298 342 17 8 chr5 34642508 34642625 -164987525 + L2 LINE L2 2303 2420 -894 851 295 85 19 chr5 34642640 34643053 -164987097 - MLT1J LTR MaLR 0 511 72 250 243 68 0 chr5 34644209 34644283 -164985867 - MIR SINE MIR 0 262 184 2116 124 26 34 chr5 34644529 34644907 -164985243 - THE1C LTR MaLR 0 375 1 201 121 0 0 chr5 34645051 34645084 -164985066 + (TC)n Simple_repeat Simple_repeat 1 33 0 325 360 86 8 chr5 34645253 34645614 -164984536 + L2 LINE L2 1599 1987 -1327 438 20 0 0 chr5 34645809 34645860 -164984290 + (TA)n Simple_repeat Simple_repeat 2 52 0 379 275 100 0 chr5 34646415 34646615 -164983535 - HAL1 LINE L1 -1175 1332 1113 716 168 15 0 chr5 34646615 34646746 -164983404 - MLT1D LTR MaLR -2 503 371 2602 217 42 109 chr5 34646746 34647803 -164982347 - MER52A LTR ERV1 0 1755 734 267 120 80 0 chr5 34647804 34647854 -164982296 - MLT2A1 LTR ERVL 0 453 400 3074 81 5 5 chr5 34647898 34648307 -164981843 - MLT2A1 LTR ERVL -35 409 1 615 291 0 0 chr5 34648336 34648477 -164981673 - MER52A LTR ERV1 -955 800 660 942 234 63 79 chr5 34648479 34648859 -164981291 - MLT1D LTR MaLR -131 374 1 201 74 0 0 chr5 34648877 34648904 -164981246 + (T)n Simple_repeat Simple_repeat 1 27 0 256 258 36 82 chr5 34648922 34649116 -164981034 - HAL1 LINE L1 -1454 1053 869 1920 158 35 30 chr5 34649503 34649876 -164980274 - THE1C LTR MaLR 0 375 1 340 302 60 37 chr5 34651567 34651856 -164978294 - MLT1I LTR MaLR -19 390 59 195 348 33 22 chr5 34651952 34652044 -164978106 - MIR SINE MIR -151 111 19 26 30 0 0 chr5 34652792 34652825 -164977325 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr5 34653261 34653290 -164976860 + AT_rich Low_complexity Low_complexity 1 29 0 24 91 0 0 chr5 34653365 34653431 -164976719 + AT_rich Low_complexity Low_complexity 1 66 0 23 0 0 0 chr5 34653444 34653467 -164976683 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 34654188 34654210 -164975940 + AT_rich Low_complexity Low_complexity 1 22 0 2512 58 0 0 chr5 34654518 34654812 -164975338 + AluY SINE Alu 3 296 -15 256 322 96 20 chr5 34654829 34654975 -164975175 + MER5A DNA MER1_type 1 157 -32 22 35 0 0 chr5 34655133 34655162 -164974988 + AT_rich Low_complexity Low_complexity 1 29 0 622 277 30 15 chr5 34655679 34655881 -164974269 - MIR SINE MIR -37 225 21 743 218 20 0 chr5 34656739 34656886 -164973264 - MLT1A1 LTR MaLR 0 365 216 1361 194 106 27 chr5 34656920 34657249 -164972901 - MLT1A2 LTR MaLR -19 355 1 291 224 0 45 chr5 34657423 34657490 -164972660 - L2 LINE L2 0 3313 3250 180 254 83 94 chr5 34657952 34658133 -164972017 - L2 LINE L2 -22 3291 3113 1476 214 127 24 chr5 34659207 34659586 -164970564 + MER47B DNA MER2_type 1 418 0 2333 87 0 6 chr5 34659612 34659923 -164970227 - AluSc SINE Alu 0 309 1 796 169 0 92 chr5 34660082 34660266 -164969884 + FRAM SINE Alu 3 169 -7 34 24 0 0 chr5 34660966 34661007 -164969143 + AT_rich Low_complexity Low_complexity 1 41 0 506 276 80 42 chr5 34661209 34661448 -164968702 + MIR SINE MIR 15 262 0 6067 89 29 1 chr5 34661774 34662833 -164967317 + L1PA14 LINE L1 5067 6150 -11 510 17 0 0 chr5 34662901 34662960 -164967190 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 2047 125 0 0 chr5 34662962 34663241 -164966909 - AluSg SINE Alu -31 279 1 331 151 0 19 chr5 34663194 34663266 -164966884 - Alu SINE Alu -255 47 1 3300 103 2 16 chr5 34663285 34663782 -164966368 + L1PB1 LINE L1 5662 6151 0 1727 176 10 13 chr5 34664695 34665001 -164965149 - AluJb SINE Alu -2 310 6 1507 238 75 55 chr5 34665032 34665275 -164964875 - L1ME1 LINE L1 -76 6090 5853 2066 120 7 0 chr5 34665275 34665566 -164964584 - AluSc SINE Alu -16 293 1 1507 238 75 55 chr5 34665566 34665885 -164964265 - L1ME1 LINE L1 -313 5853 5517 321 312 37 28 chr5 34666360 34666469 -164963681 + HAL1 LINE L1 824 933 -1574 735 233 19 0 chr5 34666469 34666628 -164963522 - MLT1E1 LTR MaLR -1 653 492 1022 161 0 0 chr5 34666632 34666787 -164963363 + FRAM SINE Alu 4 158 -18 508 301 109 6 chr5 34666787 34666943 -164963207 - MLT1E1 LTR MaLR -154 439 268 1535 129 41 110 chr5 34666954 34667272 -164962878 - MER1B DNA MER1_type 0 339 44 248 269 65 21 chr5 34667319 34667412 -164962738 - MLT1E1 LTR MaLR -358 235 139 322 264 41 41 chr5 34667482 34667603 -164962547 + HAL1 LINE L1 1832 1952 -555 324 304 47 32 chr5 34667671 34667924 -164962226 + HAL1 LINE L1 2138 2394 -113 26 0 0 0 chr5 34667939 34667965 -164962185 + AT_rich Low_complexity Low_complexity 1 26 0 26 0 0 0 chr5 34668095 34668121 -164962029 + AT_rich Low_complexity Low_complexity 1 26 0 296 307 69 16 chr5 34668367 34668556 -164961594 - MIR SINE MIR -15 247 49 267 114 0 0 chr5 34669455 34669499 -164960651 + (TG)n Simple_repeat Simple_repeat 2 45 0 266 67 22 0 chr5 34669841 34669886 -164960264 + (TG)n Simple_repeat Simple_repeat 2 47 0 28 0 0 0 chr5 34670653 34670681 -164959469 + AT_rich Low_complexity Low_complexity 1 28 0 228 214 0 0 chr5 34670792 34670848 -164959302 + (TG)n Simple_repeat Simple_repeat 2 57 0 190 256 35 93 chr5 34671438 34671524 -164958626 - MIR SINE MIR -54 208 128 30 27 0 0 chr5 34674021 34674058 -164956092 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr5 34674284 34674311 -164955839 + AT_rich Low_complexity Low_complexity 1 27 0 1518 207 0 0 chr5 34674311 34674582 -164955568 - AluJb SINE Alu -18 294 24 25 31 0 0 chr5 34674592 34674624 -164955526 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr5 34675118 34675139 -164955011 + (TAA)n Simple_repeat Simple_repeat 1 21 0 266 241 247 13 chr5 34675142 34675300 -164954850 - MIR SINE MIR -2 260 66 22 35 0 0 chr5 34675319 34675348 -164954802 + AT_rich Low_complexity Low_complexity 1 29 0 865 163 0 0 chr5 34675359 34675500 -164954650 - AluJb SINE Alu -14 298 158 1985 249 50 23 chr5 34675759 34676378 -164953772 - L1ME2 LINE L1 -10 6154 5519 28 29 0 0 chr5 34676659 34676694 -164953456 + AT_rich Low_complexity Low_complexity 1 35 0 5555 149 29 22 chr5 34677382 34678629 -164951521 - L1MA7 LINE L1 -2 6289 5024 7721 188 30 58 chr5 34678733 34680482 -164949668 - L1ME2 LINE L1 -836 5310 3619 751 174 0 0 chr5 34680482 34680603 -164949547 - FLAM_C SINE Alu -22 121 1 7721 188 30 58 chr5 34680603 34680958 -164949192 - L1ME2 LINE L1 -2527 3619 3255 1563 270 35 53 chr5 34680955 34681704 -164948446 - L1M3de LINE L1 -5581 1072 1 * 22 0 0 0 chr5 34681759 34681781 -164948369 + AT_rich Low_complexity Low_complexity 1 22 0 1341 293 116 29 chr5 34682100 34682939 -164947211 - L2 LINE L2 0 3313 2393 218 376 81 16 chr5 34682937 34683123 -164947027 + L2 LINE L2 2556 2753 -561 * 712 200 0 23 chr5 34683418 34683548 -164946602 + FLAM_C SINE Alu 2 128 -5 1096 266 95 19 chr5 34683730 34684109 -164946041 - MLT1F LTR MaLR 0 542 135 234 348 0 42 chr5 34684175 34684293 -164945857 - MLT1F LTR MaLR -429 113 1 295 281 98 8 chr5 34684294 34684439 -164945711 - MLT1F-int LTR MaLR -1 1734 1214 234 148 0 0 chr5 34684591 34684645 -164945505 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 2167 81 19 0 chr5 34685144 34685454 -164944696 - L1PA7 LINE L1 0 6154 5839 5706 70 1 1 chr5 34685454 34686223 -164943927 - L1P LINE L1 -2476 3670 2902 4988 174 36 42 chr5 34686222 34687283 -164942867 + L1P LINE L1 11 1064 -5082 * 366 61 0 0 chr5 34687486 34687535 -164942615 + (TG)n Simple_repeat Simple_repeat 1 49 0 202 220 0 20 chr5 34688241 34688291 -164941859 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 202 220 0 20 chr5 34688890 34688940 -164941210 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 24 0 0 0 chr5 34689160 34689184 -164940966 + AT_rich Low_complexity Low_complexity 1 24 0 2399 76 0 3 chr5 34689249 34689550 -164940600 - AluY SINE Alu -11 300 1 211 260 94 10 chr5 34690083 34690179 -164939971 - MIR SINE MIR -3 259 156 188 316 84 11 chr5 34690229 34690324 -164939826 - MIR SINE MIR -57 151 50 1226 259 86 40 chr5 34690343 34690953 -164939197 - MER69 DNA AcHobo -1 2525 1944 183 42 0 0 chr5 34690953 34690977 -164939173 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1226 259 86 40 chr5 34690977 34691218 -164938932 - MER69 DNA AcHobo -582 1944 294 438 289 9 0 chr5 34691220 34691334 -164938816 - MER94 DNA DNA -2 132 18 31 26 0 0 chr5 34692396 34692434 -164937716 + AT_rich Low_complexity Low_complexity 1 38 0 282 283 33 33 chr5 34692521 34692641 -164937509 - HAL1 LINE L1 -138 2369 2250 481 30 30 0 chr5 34693346 34693413 -164936737 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 465 83 111 0 chr5 34693738 34693810 -164936340 - MADE1 DNA Mariner 0 80 1 1710 279 108 30 chr5 34693841 34695048 -164935102 + L1MC4 LINE L1 6483 7900 -142 315 85 0 0 chr5 34695051 34695098 -164935052 + (TG)n Simple_repeat Simple_repeat 2 48 0 679 253 95 63 chr5 34695098 34695668 -164934482 - L1MEc LINE L1 -2700 3515 2928 2493 59 0 0 chr5 34695671 34695974 -164934176 - AluY SINE Alu -8 303 1 289 256 37 0 chr5 34696019 34696101 -164934049 - L1MEc LINE L1 -3427 2788 2704 831 253 12 52 chr5 34696172 34696516 -164933634 - L1MEc LINE L1 -3652 2563 2234 336 333 73 38 chr5 34696540 34696801 -164933349 - L1MEc LINE L1 -5340 1056 787 892 330 44 25 chr5 34697828 34698189 -164931961 - MLT1J LTR MaLR -143 368 1 747 257 41 28 chr5 34699535 34699753 -164930397 - MIR SINE MIR -21 241 21 1922 145 30 36 chr5 34701429 34701794 -164928356 + THE1B LTR MaLR 1 363 -1 1776 159 32 29 chr5 34702129 34702438 -164927712 + AluSx SINE Alu 3 312 0 1048 226 23 0 chr5 34703562 34703779 -164926371 + AluJo SINE Alu 71 292 -20 2212 100 7 7 chr5 34703838 34704138 -164926012 - AluSc SINE Alu -9 300 1 24 53 0 0 chr5 34704583 34704621 -164925529 + AT_rich Low_complexity Low_complexity 1 38 0 207 47 0 139 chr5 34704831 34704874 -164925276 + (A)n Simple_repeat Simple_repeat 1 37 0 348 278 11 11 chr5 34705459 34705549 -164924601 + MIR SINE MIR 3 92 -170 491 298 60 0 chr5 34705657 34705808 -164924342 + MIR SINE MIR 86 245 -17 293 317 96 36 chr5 34705869 34706219 -164923931 - L1MC/D LINE L1 -461 5660 5444 324 136 0 17 chr5 34706234 34706293 -164923857 - MLT1E2 LTR MaLR -2 622 565 204 40 0 0 chr5 34706338 34706363 -164923787 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 1114 251 157 112 chr5 34706363 34706868 -164923282 - MLT1E2 LTR MaLR -53 601 9 382 307 17 22 chr5 34706873 34707052 -164923098 - L1MC/D LINE L1 -686 5435 5258 5604 118 3 7 chr5 34707113 34707979 -164922171 - L1PB1 LINE L1 -2 6852 5990 669 117 29 0 chr5 34707962 34708065 -164922085 - L1PB1 LINE L1 -4466 2383 2278 * 22 0 0 0 chr5 34708916 34708938 -164921212 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 34710267 34710291 -164919859 + AT_rich Low_complexity Low_complexity 1 24 0 283 325 12 0 chr5 34710305 34710385 -164919765 + MIR3 SINE MIR 89 169 -39 2142 114 7 0 chr5 34710650 34710947 -164919203 + AluSp SINE Alu 1 299 -14 3574 30 5 0 chr5 34711340 34711769 -164918381 - L1PA4 LINE L1 -2 6153 5723 339 89 0 0 chr5 34711769 34711814 -164918336 + L1PA4 LINE L1 5681 5725 -430 23 0 0 0 chr5 34711819 34711842 -164918308 + AT_rich Low_complexity Low_complexity 1 23 0 295 26 0 0 chr5 34711842 34711880 -164918270 + L1PA3 LINE L1 5866 5903 -252 1596 102 0 31 chr5 34711900 34712156 -164917994 - L1PA13 LINE L1 -19 6144 5897 1888 150 7 10 chr5 34712246 34712552 -164917598 - AluSx SINE Alu -7 305 1 568 223 42 24 chr5 34714208 34714374 -164915776 - LTR33 LTR ERVL -18 503 335 377 273 20 33 chr5 34714472 34714622 -164915528 - LTR33 LTR ERVL -373 148 1 777 241 84 33 chr5 34714741 34714975 -164915175 - L1MA9 LINE L1 -38 6274 6053 2635 17 0 0 chr5 34714975 34715268 -164914882 + AluYa5 SINE Alu 1 293 -18 777 241 84 33 chr5 34715268 34715398 -164914752 - L1MA9 LINE L1 -259 6053 5802 1868 153 123 50 chr5 34715729 34716128 -164914022 + MSTA LTR MaLR 1 428 0 545 315 113 56 chr5 34716463 34717073 -164913077 + L1ME4a LINE L1 5320 5964 -157 382 344 114 13 chr5 34717979 34718206 -164911944 - MIR SINE MIR 0 262 13 3214 160 8 4 chr5 34718308 34718833 -164911317 + MER1A DNA MER1_type 1 527 0 198 0 0 0 chr5 34719269 34719291 -164910859 + (T)n Simple_repeat Simple_repeat 1 22 0 186 150 0 0 chr5 34720514 34720554 -164909596 + (TTTTTA)n Simple_repeat Simple_repeat 2 41 0 4898 129 36 4 chr5 34720569 34721354 -164908796 - L1PA16 LINE L1 -5 6161 5352 7645 26 0 0 chr5 34721366 34722440 -164907710 - L1PA3 LINE L1 -10 6145 5072 2423 246 108 10 chr5 34722943 34723806 -164906344 + L1M4 LINE L1 4110 5056 -1090 636 238 110 0 chr5 34723816 34723980 -164906170 + MER58A DNA MER1_type 43 224 0 197 128 0 26 chr5 34724498 34724537 -164905613 + (TTCCC)n Simple_repeat Simple_repeat 2 39 0 381 318 110 42 chr5 34724659 34725014 -164905136 - L1M4 LINE L1 -2167 3979 3601 28 29 0 0 chr5 34725152 34725187 -164904963 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 34726076 34726098 -164904052 + AT_rich Low_complexity Low_complexity 1 22 0 2273 78 3 3 chr5 34726290 34726585 -164903565 - AluY SINE Alu -16 295 1 203 175 0 0 chr5 34726783 34726823 -164903327 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2331 54 11 0 chr5 34727227 34727561 -164902589 - AluY SINE Alu 0 337 1 2690 130 23 23 chr5 34727786 34728218 -164901932 - Tigger2a DNA MER2_type 0 434 3 574 303 19 6 chr5 34728231 34728393 -164901757 + MER91A DNA MER1_type 10 173 -23 306 182 52 13 chr5 34728738 34728815 -164901335 - MER116 DNA Mariner 0 80 1 278 151 0 49 chr5 34729221 34729282 -164900868 - MLT1B LTR MaLR -7 460 301 248 254 18 0 chr5 34729833 34729905 -164900245 + MIR SINE MIR 74 147 -61 693 197 22 60 chr5 34732189 34732372 -164897778 + LTR40a LTR ERVL 1 233 -286 198 103 0 0 chr5 34732376 34732405 -164897745 + (TG)n Simple_repeat Simple_repeat 1 29 0 309 262 128 103 chr5 34733617 34734189 -164895961 + HAL1 LINE L1 1291 1876 -631 2007 92 26 4 chr5 34735107 34735380 -164894770 + AluSg SINE Alu 1 279 -31 2627 45 0 3 chr5 34735857 34736167 -164893983 - AluY SINE Alu -2 309 1 512 146 100 77 chr5 34736997 34737127 -164893023 + MER20 DNA MER1_type 1 133 -86 315 150 0 0 chr5 34737755 34737815 -164892335 + (GA)n Simple_repeat Simple_repeat 1 60 0 251 277 79 40 chr5 34737847 34737948 -164892202 - LTR67 LTR ERVL -339 218 114 391 273 25 12 chr5 34740115 34740276 -164889874 + (TA)n Simple_repeat Simple_repeat 1 163 0 357 92 62 46 chr5 34740553 34740618 -164889532 + MADE1 DNA Mariner 13 78 -2 333 326 41 20 chr5 34740928 34741075 -164889075 + L2 LINE L2 2173 2322 -992 2190 107 13 0 chr5 34741206 34741515 -164888635 + AluSp SINE Alu 1 313 0 683 146 73 15 chr5 34741654 34741791 -164888359 + MLT1B LTR MaLR 13 157 -233 7331 26 0 0 chr5 34741796 34743041 -164887109 - L1PA4 LINE L1 0 6155 4913 2936 32 14 0 chr5 34743042 34743411 -164886739 + L1P LINE L1 2706 3079 -3067 2333 107 7 0 chr5 34746381 34746691 -164883459 - AluSq SINE Alu -1 312 1 426 78 0 0 chr5 34749455 34749519 -164880631 + Alu SINE Alu 244 307 -4 2290 82 10 3 chr5 34749530 34749822 -164880328 + AluSp SINE Alu 1 294 -19 2446 124 5 19 chr5 34750667 34751045 -164879105 - THE1C LTR MaLR 0 375 3 356 238 8 0 chr5 34751330 34751456 -164878694 + (TA)n Simple_repeat Simple_repeat 2 128 0 27 29 0 0 chr5 34751576 34751610 -164878540 + AT_rich Low_complexity Low_complexity 1 34 0 777 159 13 70 chr5 34752077 34752105 -164878045 + FAM SINE Alu 26 54 -267 2500 134 0 3 chr5 34752105 34752470 -164877680 - THE1B LTR MaLR 0 364 1 777 159 13 70 chr5 34752470 34752598 -164877552 + FAM SINE Alu 54 173 -12 335 298 12 0 chr5 34753658 34753742 -164876408 - L2 LINE L2 -4 3268 3184 474 232 45 18 chr5 34753968 34754080 -164876070 + L1MDa LINE L1 11 125 -6415 279 146 0 0 chr5 34754094 34754142 -164876008 - L1MDa LINE L1 -6452 88 41 1216 231 58 36 chr5 34754166 34754368 -164875782 + L1MDa LINE L1 115 330 -6210 2444 120 19 6 chr5 34754368 34754727 -164875423 + THE1B LTR MaLR 1 364 0 1216 231 58 36 chr5 34754727 34754884 -164875266 + L1MDa LINE L1 330 482 -6058 3239 96 0 13 chr5 34755669 34756126 -164874024 + L1PA8A LINE L1 5669 6119 -12 353 238 0 0 chr5 34756165 34756245 -164873905 - L1M4 LINE L1 -1983 4163 4084 255 263 9 35 chr5 34756239 34756353 -164873797 - L1MEc LINE L1 -4665 2457 2347 * 1124 281 36 60 chr5 34756897 34757177 -164872973 - L1MEc LINE L1 -5841 582 320 1004 237 68 78 chr5 34757177 34757649 -164872501 + MLT1C LTR MaLR 1 467 0 1124 281 36 60 chr5 34757649 34757902 -164872248 - L1MEc LINE L1 -6103 320 62 21 0 0 0 chr5 34758949 34758970 -164871180 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 34759794 34759823 -164870327 + AT_rich Low_complexity Low_complexity 1 29 0 344 184 28 9 chr5 34760842 34760951 -164869199 + (TA)n Simple_repeat Simple_repeat 2 112 0 1131 294 10 35 chr5 34762053 34762454 -164867696 + LTR16A LTR ERVL 27 417 -33 944 343 70 18 chr5 34762874 34763431 -164866719 + HERV16 LTR ERVL 809 1394 -3602 1414 300 46 18 chr5 34763435 34763932 -164866218 + HERV16 LTR ERVL 1682 2192 -2804 230 285 29 80 chr5 34764428 34764565 -164865585 + MLT1K LTR MaLR 422 551 -37 207 0 0 0 chr5 34765008 34765031 -164865119 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 809 175 23 41 chr5 34765670 34765841 -164864309 + MER58A DNA MER1_type 26 193 -31 2433 63 7 0 chr5 34765841 34766141 -164864009 + AluY SINE Alu 1 302 -9 663 279 44 63 chr5 34767000 34767315 -164862835 - L2 LINE L2 0 3313 3005 270 254 45 0 chr5 34768732 34768799 -164861351 - L2 LINE L2 0 3313 3244 21 36 0 0 chr5 34768861 34768889 -164861261 + AT_rich Low_complexity Low_complexity 1 28 0 1452 224 37 8 chr5 34769535 34770025 -164860125 - L1M4c LINE L1 -2922 3722 3219 3484 136 9 2 chr5 34770041 34770599 -164859551 - L1PA10 LINE L1 -11 6157 5596 1742 189 6 9 chr5 34770600 34770917 -164859233 - L1P3 LINE L1 -5557 318 3 1735 149 45 36 chr5 34771100 34771408 -164858742 + AluSx SINE Alu 1 311 -1 1646 230 26 33 chr5 34771410 34771423 -164858727 - L1M4c LINE L1 -3454 3190 3178 2516 111 8 0 chr5 34771423 34771775 -164858375 - THE1A LTR MaLR 0 355 1 1646 230 26 33 chr5 34771775 34772235 -164857915 - L1M4c LINE L1 -3466 3178 2719 2131 128 3 0 chr5 34772235 34772532 -164857618 - AluSx SINE Alu -14 298 1 1646 230 26 33 chr5 34772532 34772631 -164857519 - L1M4c LINE L1 -3925 2719 2621 2150 150 8 33 chr5 34772633 34773000 -164857150 - THE1B LTR MaLR 0 364 7 9313 146 41 5 chr5 34773005 34774529 -164855621 - THE1B-int LTR MaLR 0 1580 1 2365 139 14 0 chr5 34774529 34774888 -164855262 - THE1B LTR MaLR 0 364 1 3709 262 64 43 chr5 34774902 34777202 -164852948 - L1M4c LINE L1 -4176 2649 152 472 162 34 51 chr5 34777229 34777283 -164852867 + L1PA16 LINE L1 6040 6093 -73 2277 115 47 16 chr5 34777283 34777647 -164852503 + THE1C LTR MaLR 1 375 0 472 162 34 51 chr5 34777647 34777709 -164852441 + L1PA16 LINE L1 6093 6154 -12 580 161 45 0 chr5 34777713 34777825 -164852325 + L1PA16 LINE L1 17 133 -7432 * 7583 159 38 0 chr5 34777822 34779048 -164851102 + L1PA16 LINE L1 1099 2371 -5194 4615 139 17 4 chr5 34779042 34779802 -164850348 + L1PA16 LINE L1 6681 7450 -135 * 1004 189 26 0 chr5 34779802 34779992 -164850158 + L1PA16 LINE L1 5971 6165 -1 416 170 0 85 chr5 34780000 34780094 -164850056 + LTR29 LTR ERV1 465 550 -72 1641 102 23 8 chr5 34780519 34780783 -164849367 - L1PA8A LINE L1 -513 5618 5351 2057 263 42 40 chr5 34780841 34781353 -164848797 + L1MC/D LINE L1 4264 4774 -1576 2787 3 0 3 chr5 34781353 34781656 -164848494 + AluYa5 SINE Alu 1 302 -9 2057 263 42 40 chr5 34781656 34782472 -164847678 + L1MC/D LINE L1 4774 5607 -743 23 0 0 0 chr5 34782479 34782502 -164847648 + AT_rich Low_complexity Low_complexity 1 23 0 7818 200 67 48 chr5 34782502 34786072 -164844078 - L1MA7 LINE L1 -2 6493 2229 2380 83 0 3 chr5 34786072 34786373 -164843777 - AluSq SINE Alu -13 300 1 7818 200 67 48 chr5 34786373 34786598 -164843552 - L1MA7 LINE L1 -4266 2229 2010 2131 189 44 7 chr5 34786701 34787109 -164843041 - MSTB1 LTR MaLR 0 432 10 2249 280 33 54 chr5 34787142 34788589 -164841561 - L1MA7 LINE L1 -4246 2105 819 486 298 35 6 chr5 34788782 34788953 -164841197 - L1MA7 LINE L1 -6105 176 1 1648 104 4 24 chr5 34789740 34789989 -164840161 - L1PA11 LINE L1 0 6174 5931 2161 113 3 0 chr5 34790290 34790581 -164839569 - AluSg SINE Alu -18 292 1 8302 195 12 18 chr5 34793325 34794940 -164835210 + MST-int LTR MaLR 1 1605 -46 474 140 43 11 chr5 34794941 34795034 -164835116 + MER4A LTR ERV1 3 98 -566 1620 146 165 76 chr5 34795035 34795405 -164834745 + MER4A LTR ERV1 262 664 0 5286 137 74 55 chr5 34795408 34796067 -164834083 + MER4A-int LTR ERV1 1 646 -4369 180 0 0 0 chr5 34796067 34796087 -164834063 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 417 20 0 0 chr5 34796086 34796136 -164834014 + (CA)n Simple_repeat Simple_repeat 1 50 0 5286 137 74 55 chr5 34796087 34797843 -164832307 + MER4A-int LTR ERV1 646 1362 -3653 1034 183 152 5 chr5 34797843 34798067 -164832083 - LTR8 LTR ERV1 -434 257 1 296 121 138 0 chr5 34798071 34798129 -164832021 + PABL_A-int LTR ERV1 3596 3661 -1354 1201 161 68 21 chr5 34798135 34798378 -164831772 + MSTB1 LTR MaLR 174 372 -3 189 195 0 0 chr5 34798600 34798641 -164831509 + (CATA)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr5 34798989 34799010 -164831140 + AT_rich Low_complexity Low_complexity 1 21 0 197 223 0 0 chr5 34799776 34799829 -164830321 + MIR SINE MIR 99 151 -57 6554 64 10 0 chr5 34799976 34800322 -164829828 - L1PA7 LINE L1 0 6154 5813 2925 13 0 0 chr5 34800322 34800640 -164829510 - AluYb8 SINE Alu 0 318 1 6554 64 10 0 chr5 34800640 34801889 -164828261 - L1PA7 LINE L1 -341 5813 4581 3704 42 26 0 chr5 34801989 34802645 -164827505 - L1P2 LINE L1 -572 5582 4913 * 3980 30 6 2 chr5 34802641 34803140 -164827010 + L1P LINE L1 2701 3201 -2945 1317 160 16 29 chr5 34803140 34803384 -164826766 + MLT1B LTR MaLR 148 388 -2 194 301 0 14 chr5 34803671 34803744 -164826406 + L2 LINE L2 2317 2388 -926 1467 213 50 79 chr5 34803756 34804235 -164825915 - MLT1C LTR MaLR 0 467 3 809 333 93 38 chr5 34804321 34805049 -164825101 - L2 LINE L2 -3 3310 2543 1908 211 36 101 chr5 34805095 34805760 -164824390 + MLT1E2 LTR MaLR 1 622 -4 192 152 0 0 chr5 34806346 34806379 -164823771 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 395 276 29 16 chr5 34806580 34806767 -164823383 - L1MC/D LINE L1 -537 5584 5484 222 160 0 0 chr5 34807474 34807524 -164822626 + A-rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr5 34807624 34807647 -164822503 + AT_rich Low_complexity Low_complexity 1 23 0 51 65 0 0 chr5 34807847 34807940 -164822210 + AT_rich Low_complexity Low_complexity 1 93 0 242 254 45 9 chr5 34808116 34808226 -164821924 + HAL1 LINE L1 2252 2365 -142 1504 163 89 21 chr5 34808312 34808650 -164821500 + MER46B DNA MER2_type 1 236 0 284 169 34 0 chr5 34809152 34809211 -164820939 - Tigger4(Zombi) DNA MER2_type -72 2659 2599 324 324 51 34 chr5 34810207 34810383 -164819767 + L2 LINE L2 3133 3311 -2 26 0 0 0 chr5 34810856 34810882 -164819268 + AT_rich Low_complexity Low_complexity 1 26 0 334 294 163 22 chr5 34811425 34811541 -164818609 + L1ME3A LINE L1 4499 4597 -1549 378 0 0 0 chr5 34811541 34811583 -164818567 + (TG)n Simple_repeat Simple_repeat 1 42 0 334 294 163 22 chr5 34811583 34812099 -164818051 + L1ME3A LINE L1 4597 5220 -926 2301 92 20 0 chr5 34812131 34812423 -164817727 + AluSg SINE Alu 7 304 -6 436 354 56 0 chr5 34812437 34812581 -164817569 - MER91A DNA MER1_type -43 153 2 228 285 39 31 chr5 34812589 34812719 -164817431 + L1ME3A LINE L1 5215 5345 -801 3076 90 16 14 chr5 34812791 34813234 -164816916 + MLT2A1 LTR ERVL 1 444 0 646 290 117 21 chr5 34813260 34813629 -164816521 + L1ME3A LINE L1 5494 5911 -259 1694 168 49 41 chr5 34813629 34813974 -164816176 - MER7A DNA MER2_type 0 346 1 646 290 117 21 chr5 34813974 34814032 -164816118 + L1ME3A LINE L1 5911 5962 -208 1745 227 42 18 chr5 34814331 34814780 -164815370 - MLT1C LTR MaLR 0 467 8 223 313 14 116 chr5 34815750 34815897 -164814253 - MIR3 SINE MIR -3 205 74 22 0 0 0 chr5 34816369 34816391 -164813759 + AT_rich Low_complexity Low_complexity 1 22 0 2526 161 25 2 chr5 34816861 34817308 -164812842 - L1PB4 LINE L1 0 6156 5700 1773 162 13 0 chr5 34817308 34817623 -164812527 + L1PB4 LINE L1 5365 5683 -473 2100 161 14 55 chr5 34817632 34817819 -164812331 + MSTB LTR MaLR 1 194 -232 2145 134 0 6 chr5 34817819 34818133 -164812017 - AluSx SINE Alu 0 312 1 2100 161 14 55 chr5 34818133 34818361 -164811789 + MSTB LTR MaLR 194 399 -27 216 67 0 0 chr5 34818361 34818391 -164811759 + (T)n Simple_repeat Simple_repeat 1 30 0 4744 141 26 5 chr5 34819667 34820483 -164809667 - L1MC2 LINE L1 -3 6341 5509 33 56 0 0 chr5 34820859 34820913 -164809237 + AT_rich Low_complexity Low_complexity 1 54 0 22 0 0 0 chr5 34822737 34822759 -164807391 + AT_rich Low_complexity Low_complexity 1 22 0 268 304 89 25 chr5 34822921 34823079 -164807071 + LTR16A LTR ERVL 276 443 -7 980 358 38 19 chr5 34823112 34823693 -164806457 + HERV16 LTR ERVL 48 639 -4357 403 217 225 14 chr5 34823735 34823873 -164806277 + MER96 DNA MER1_type 5 171 -4 662 311 36 8 chr5 34824450 34824698 -164805452 + HERV16 LTR ERVL 1710 1964 -3032 1393 352 63 18 chr5 34824715 34825985 -164804165 + HERV16 LTR ERVL 2683 3997 -1657 285 286 24 16 chr5 34825985 34826111 -164804039 + HERV16 LTR ERVL 3895 4021 -1743 326 307 66 18 chr5 34826333 34826499 -164803651 + HERV16 LTR ERVL 4150 4323 -1331 707 298 85 34 chr5 34826528 34827037 -164803113 + HERV16 LTR ERVL 4494 4983 -502 385 297 125 0 chr5 34827343 34827471 -164802679 - MER58B DNA MER1_type 0 341 198 307 321 66 58 chr5 34827665 34827802 -164802348 - L2 LINE L2 -3 3269 3132 685 332 70 27 chr5 34828204 34828764 -164801386 - L2 LINE L2 -1001 2313 1730 2151 103 0 35 chr5 34828859 34829170 -164800980 + AluSq SINE Alu 1 300 -13 435 160 21 0 chr5 34829333 34829427 -164800723 - L1MA7 LINE L1 -4 6287 6192 231 319 14 0 chr5 34829623 34829692 -164800458 + L1MCc LINE L1 371 440 -5983 905 275 48 22 chr5 34830166 34830620 -164799530 + L1M4 LINE L1 4225 4690 -1456 1292 204 9 20 chr5 34830778 34831098 -164799052 - MLT1A1 LTR MaLR 0 365 1 24 0 0 0 chr5 34831322 34831346 -164798804 + AT_rich Low_complexity Low_complexity 1 24 0 327 296 43 17 chr5 34832998 34833113 -164797037 - L2 LINE L2 -4 3309 3192 486 194 65 35 chr5 34833232 34833450 -164796700 - MLT1A1 LTR MaLR -92 273 1 24 0 0 0 chr5 34833663 34833687 -164796463 + AT_rich Low_complexity Low_complexity 1 24 0 324 283 62 18 chr5 34835304 34835417 -164794733 - L2 LINE L2 -4 3309 3192 202 320 27 0 chr5 34836153 34836228 -164793922 + L2 LINE L2 3237 3313 0 353 284 47 88 chr5 34836942 34837157 -164792993 + MIR SINE MIR 47 252 -10 288 138 17 0 chr5 34837265 34837323 -164792827 + L1P LINE L1 5338 5396 -769 2192 105 0 0 chr5 34837323 34837609 -164792541 + AluSg SINE Alu 1 286 -24 3656 184 33 9 chr5 34837613 34838373 -164791777 + L1MC2 LINE L1 5559 6336 -8 316 323 86 36 chr5 34838373 34838593 -164791557 - L2 LINE L2 -69 3244 3014 273 310 25 120 chr5 34838749 34838803 -164791347 + L2 LINE L2 2688 2746 -568 784 170 0 25 chr5 34838803 34838962 -164791188 - L1MA10 LINE L1 -3 6331 6177 273 310 25 120 chr5 34838962 34839223 -164790927 + L2 LINE L2 2746 2973 -341 314 250 24 0 chr5 34839313 34839397 -164790753 + L2 LINE L2 2976 3061 -252 207 159 0 164 chr5 34839638 34839846 -164790304 + (TATAG)n Simple_repeat Simple_repeat 5 178 0 220 163 0 147 chr5 34839894 34840084 -164790066 + (TATAA)n Simple_repeat Simple_repeat 5 166 0 * 225 164 0 148 chr5 34840015 34840294 -164789856 + (TATAG)n Simple_repeat Simple_repeat 1 237 0 211 164 0 155 chr5 34840373 34840580 -164789570 + (TATAG)n Simple_repeat Simple_repeat 1 175 0 * 217 153 11 142 chr5 34840432 34840622 -164789528 + (TATAA)n Simple_repeat Simple_repeat 5 169 0 309 284 55 18 chr5 34840697 34840806 -164789344 + L2 LINE L2 3197 3309 -4 607 339 80 42 chr5 34844335 34845088 -164785062 - L2 LINE L2 -269 3044 2220 1628 189 8 23 chr5 34845088 34845420 -164784730 - L1MA6 LINE L1 -221 6082 5753 1162 143 22 9 chr5 34845420 34845637 -164784513 + L1MA6 LINE L1 6074 6300 0 1628 189 8 23 chr5 34845637 34845680 -164784470 - L1MA6 LINE L1 -550 5753 5711 1113 345 171 36 chr5 34845705 34847320 -164782830 - L2 LINE L2 -1149 2165 333 575 335 12 0 chr5 34847366 34847539 -164782611 - MIR SINE MIR -56 206 32 283 287 62 53 chr5 34847871 34848080 -164782070 + MLT1I LTR MaLR 4 214 -195 1427 191 94 4 chr5 34848365 34848642 -164781508 - AluJb SINE Alu -10 302 1 21 0 0 0 chr5 34848955 34848976 -164781174 + AT_rich Low_complexity Low_complexity 1 21 0 300 200 0 0 chr5 34849801 34849876 -164780274 + CT-rich Low_complexity Low_complexity 1 75 0 257 332 137 32 chr5 34850518 34851115 -164779035 + L2 LINE L2 1713 2372 -942 1162 93 0 7 chr5 34851218 34851369 -164778781 - AluSg/x SINE Alu -30 282 133 516 363 117 11 chr5 34851378 34851755 -164778395 + L2 LINE L2 2549 2965 -349 368 346 81 0 chr5 34851834 34851970 -164778180 + L2 LINE L2 3167 3313 0 27 87 0 0 chr5 34852067 34852136 -164778014 + AT_rich Low_complexity Low_complexity 1 69 0 286 233 0 14 chr5 34852503 34852576 -164777574 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 189 255 106 85 chr5 34852760 34852854 -164777296 - L2 LINE L2 -8 3305 3210 827 217 65 28 chr5 34854358 34854575 -164775575 + LTR50 LTR ERVL 1 225 -570 294 234 102 36 chr5 34854576 34854787 -164775363 + LTR50 LTR ERVL 536 792 -3 25 31 0 0 chr5 34854799 34854831 -164775319 + AT_rich Low_complexity Low_complexity 1 32 0 2624 24 0 0 chr5 34854873 34855168 -164774982 + AluY SINE Alu 1 295 -16 360 94 0 0 chr5 34855872 34855925 -164774225 + (A)n Simple_repeat Simple_repeat 1 53 0 630 235 50 40 chr5 34856625 34856825 -164773325 - MER3 DNA MER1_type -7 202 1 2312 66 24 3 chr5 34856921 34857210 -164772940 + AluY SINE Alu 1 295 -16 415 283 58 0 chr5 34859208 34859328 -164770822 - MER94 DNA DNA -5 129 3 1190 107 12 0 chr5 34859643 34859811 -164770339 + AluSp SINE Alu 133 302 -11 419 309 40 8 chr5 34860580 34860706 -164769444 + MIR SINE MIR 15 144 -118 309 26 0 0 chr5 34861954 34861992 -164768158 + (TG)n Simple_repeat Simple_repeat 1 38 0 187 203 27 14 chr5 34862224 34862298 -164767852 + A-rich Low_complexity Low_complexity 2 76 0 214 164 16 16 chr5 34862386 34862447 -164767703 + GA-rich Low_complexity Low_complexity 3 63 0 812 294 23 3 chr5 34862835 34863185 -164766965 + L1M4 LINE L1 4786 5142 -1004 440 248 86 17 chr5 34863369 34863671 -164766479 + L1MEc LINE L1 815 1137 -5259 2749 170 37 12 chr5 34863773 34864344 -164765806 + L1MC2 LINE L1 5760 6344 0 545 141 196 117 chr5 34865340 34865503 -164764647 + MER44D DNA MER2_type 2 447 -162 2186 149 22 3 chr5 34865503 34865871 -164764279 + THE1C LTR MaLR 1 375 0 7990 136 40 0 chr5 34865871 34867090 -164763060 + THE1C-int LTR MaLR 1 1268 -312 234 0 0 0 chr5 34867259 34867285 -164762865 + (CA)n Simple_repeat Simple_repeat 2 27 0 215 167 0 24 chr5 34867286 34867328 -164762822 + (TATG)n Simple_repeat Simple_repeat 2 42 0 24445 136 19 34 chr5 34867622 34868786 -164761364 + L1PA8A LINE L1 26 1207 -5239 198 0 0 0 chr5 34868786 34868808 -164761342 + (CAA)n Simple_repeat Simple_repeat 3 24 0 24445 136 19 34 chr5 34868808 34874088 -164756062 + L1PA8A LINE L1 1207 6417 -29 212 21 21 62 chr5 34875661 34875709 -164754441 + (TA)n Simple_repeat Simple_repeat 2 47 0 11537 131 23 28 chr5 34875809 34876973 -164753177 - Tigger1 DNA MER2_type 0 2418 1267 2361 88 0 3 chr5 34876973 34877279 -164752871 + AluY SINE Alu 3 307 -4 11537 131 23 28 chr5 34877279 34878053 -164752097 - Tigger1 DNA MER2_type -1151 1267 490 439 233 117 44 chr5 34878367 34878573 -164751577 - LTR52 LTR ERVL -200 221 1 394 348 18 71 chr5 34878971 34879158 -164750992 + L2 LINE L2 2866 3024 -289 1623 164 7 11 chr5 34879158 34879457 -164750693 + AluJb SINE Alu 9 306 0 394 348 18 71 chr5 34879457 34879662 -164750488 + L2 LINE L2 3024 3238 -75 527 315 105 5 chr5 34880001 34880220 -164749930 + MIR SINE MIR 11 251 -11 21 0 0 0 chr5 34880444 34880465 -164749685 + AT_rich Low_complexity Low_complexity 1 21 0 2508 67 0 3 chr5 34880833 34881145 -164749005 - AluY SINE Alu 0 311 1 22 35 0 0 chr5 34881592 34881621 -164748529 + AT_rich Low_complexity Low_complexity 1 29 0 442 304 88 5 chr5 34882895 34883112 -164747038 - LTR16C LTR ERVL 0 491 257 301 140 193 0 chr5 34883417 34883474 -164746676 + Tigger2 DNA MER2_type 1 68 -2650 * 1933 128 15 181 chr5 34883459 34883991 -164746159 + Tigger2 DNA MER2_type 2267 2710 -8 204 407 57 14 chr5 34884102 34884242 -164745908 + L2 LINE L2 3122 3267 -5 53 69 0 0 chr5 34885187 34885289 -164744861 + AT_rich Low_complexity Low_complexity 1 102 0 249 235 59 0 chr5 34885805 34885890 -164744260 + L1M4 LINE L1 4500 4589 -1557 21 0 0 0 chr5 34886055 34886076 -164744074 + AT_rich Low_complexity Low_complexity 1 21 0 2485 122 6 0 chr5 34886098 34886458 -164743692 - THE1B LTR MaLR -2 362 1 8118 126 51 35 chr5 34886458 34887780 -164742370 - THE1B-int LTR MaLR 0 1580 238 207 316 38 0 chr5 34888009 34888088 -164742062 + L2 LINE L2 3229 3310 -3 21 0 0 0 chr5 34888606 34888627 -164741523 + AT_rich Low_complexity Low_complexity 1 21 0 29 94 0 0 chr5 34889633 34889718 -164740432 + AT_rich Low_complexity Low_complexity 1 85 0 348 248 62 31 chr5 34890072 34890201 -164739949 + MIR3 SINE MIR 44 176 -32 320 305 76 23 chr5 34890685 34890816 -164739334 + L2 LINE L2 3176 3313 0 24 32 0 0 chr5 34890979 34891010 -164739140 + AT_rich Low_complexity Low_complexity 1 31 0 797 286 87 4 chr5 34891010 34891241 -164738909 - MIR SINE MIR -5 257 8 203 317 66 44 chr5 34891958 34892141 -164738009 - L2 LINE L2 -812 2502 2316 337 245 0 20 chr5 34892265 34892363 -164737787 - Charlie1 DNA MER1_type -10 2751 2656 1661 213 57 40 chr5 34892464 34892958 -164737192 - Charlie1 DNA MER1_type -518 2243 1742 2163 139 25 3 chr5 34893914 34894267 -164735883 - THE1C LTR MaLR 0 375 15 270 316 51 0 chr5 34894572 34894670 -164735480 + Tigger8 DNA MER2_type 2 104 -562 28 48 0 0 chr5 34894931 34894973 -164735177 + AT_rich Low_complexity Low_complexity 1 42 0 376 341 73 6 chr5 34894987 34895342 -164734808 + Tigger8 DNA MER2_type 284 662 -4 1531 185 3 31 chr5 34895461 34895747 -164734403 - AluJo SINE Alu -14 298 21 240 280 13 13 chr5 34896054 34896129 -164734021 + MIR SINE MIR 88 162 -100 228 235 37 0 chr5 34896419 34896500 -164733650 - HAL1 LINE L1 -173 2334 2251 297 0 0 0 chr5 34897228 34897261 -164732889 + (CA)n Simple_repeat Simple_repeat 1 33 0 209 349 40 33 chr5 34897456 34897608 -164732542 - MIR3 SINE MIR -25 183 31 469 315 108 12 chr5 34898044 34898295 -164731855 + LTR16A LTR ERVL 165 439 -11 259 344 81 19 chr5 34898383 34898543 -164731607 + HERV16 LTR ERVL 79 248 -4748 1579 235 147 5 chr5 34898710 34899139 -164731011 + MLT1E2 LTR MaLR 137 626 0 2253 89 4 0 chr5 34899331 34899612 -164730538 + AluSp SINE Alu 2 283 -30 2933 189 33 71 chr5 34901310 34902031 -164728119 - LTR8A LTR ERV1 0 727 34 851 219 31 44 chr5 34902178 34902406 -164727744 + MLT1E1 LTR MaLR 1 225 -429 1115 248 16 0 chr5 34902460 34902706 -164727444 + MLT1E1 LTR MaLR 405 654 0 300 303 11 51 chr5 34903312 34903490 -164726660 + LTR16C LTR ERVL 321 491 0 226 255 85 32 chr5 34903529 34903603 -164726547 - L2 LINE L2 -76 3237 3156 248 89 0 22 chr5 34903603 34903648 -164726502 + (CA)n Simple_repeat Simple_repeat 2 45 0 226 255 85 32 chr5 34903648 34903667 -164726483 - L2 LINE L2 -157 3156 3139 1166 167 19 23 chr5 34903698 34903914 -164726236 + AluJb SINE Alu 82 296 -16 225 164 224 0 chr5 34905083 34905150 -164725000 + L1MC4 LINE L1 6617 6698 -1344 274 285 61 42 chr5 34905843 34906008 -164724142 + L1ME3A LINE L1 5959 6126 -44 972 273 77 3 chr5 34906328 34906694 -164723456 - L1ME3A LINE L1 -286 5884 5492 206 103 0 26 chr5 34907644 34907683 -164722467 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 657 173 47 8 chr5 34907721 34907848 -164722302 + FRAM SINE Alu 9 140 -36 2433 51 0 29 chr5 34909002 34909318 -164720832 - AluY SINE Alu -4 307 1 2344 62 7 0 chr5 34909565 34909878 -164720272 - AluY SINE Alu 0 311 1 2982 134 4 8 chr5 34910472 34910948 -164719202 - MER41B LTR ERV1 -159 476 3 21 0 0 0 chr5 34911103 34911124 -164719026 + AT_rich Low_complexity Low_complexity 1 21 0 1956 166 32 54 chr5 34913413 34913854 -164716296 - LTR49 LTR ERV1 0 595 165 10471 29 1 2 chr5 34914026 34915258 -164714892 - HERVK LTR ERVK -6013 1230 1 7858 52 15 2 chr5 34915261 34916215 -164713935 - LTR5 LTR ERVK -3 966 1 13767 78 4 3 chr5 34916215 34918097 -164712053 - L1P LINE L1 -2271 3875 1993 611 311 32 16 chr5 34918213 34918522 -164711628 + L1M4 LINE L1 4020 4333 -1813 12211 175 37 22 chr5 34918832 34921146 -164709004 + L1M1 LINE L1 8 2355 -5210 1303 268 125 16 chr5 34971223 34972283 -164657867 - L1MEc LINE L1 -3213 3728 2593 1129 88 16 6 chr5 34972400 34972582 -164657568 - MER4A-int LTR ERV1 -4477 2121 1938 5252 123 58 45 chr5 34972584 34973763 -164656387 - MER4A-int LTR ERV1 -3653 1362 668 345 24 0 0 chr5 34973763 34973805 -164656345 + (TG)n Simple_repeat Simple_repeat 1 42 0 5252 123 58 45 chr5 34973805 34974482 -164655668 - MER4A-int LTR ERV1 -4347 668 1 1620 146 165 76 chr5 34974485 34974855 -164655295 - MER4A LTR ERV1 0 664 262 474 140 43 11 chr5 34974856 34974949 -164655201 - MER4A LTR ERV1 -566 98 3 7575 224 11 40 chr5 34974950 34976604 -164653546 - MLT1A1-int LTR MaLR -46 1605 1 261 364 24 34 chr5 34977784 34977990 -164652160 - ERVL LTR ERVL -670 5094 4891 377 300 18 0 chr5 34978523 34978633 -164651517 + MLT1C LTR MaLR 356 467 0 905 227 74 8 chr5 34978633 34978875 -164651275 - L1MEc LINE L1 -6104 319 62 21 0 0 0 chr5 34979922 34979943 -164650207 + AT_rich Low_complexity Low_complexity 1 21 0 339 263 0 35 chr5 34981794 34981908 -164648242 + L1MC4 LINE L1 6592 6701 -1341 5145 17 2 0 chr5 34982683 34983278 -164646872 - L1P LINE L1 -1487 4659 4064 4911 55 0 0 chr5 34983273 34983890 -164646260 + L1P LINE L1 1642 2258 -3888 * 1710 159 9 55 chr5 34985864 34986191 -164643959 + AluSx SINE Alu 1 312 0 1903 89 0 4 chr5 34987681 34987927 -164642223 - AluSc SINE Alu -20 289 45 230 366 21 0 chr5 34988097 34988190 -164641960 + MLT1H LTR MaLR 118 212 -337 393 294 116 1 chr5 34989290 34989455 -164640695 - MIR3 SINE MIR -9 199 12 2031 112 10 13 chr5 34989576 34989888 -164640262 + THE1A LTR MaLR 1 311 -44 639 245 14 7 chr5 34989993 34990136 -164640014 - MER45A DNA AcHobo -34 144 1 533 352 22 9 chr5 34990334 34990561 -164639589 - MIR SINE MIR -31 231 2 1608 224 34 25 chr5 34991498 34991857 -164638293 - MLT1A1 LTR MaLR 0 396 2 1709 218 5 14 chr5 34992503 34992870 -164637280 - MLT1A1 LTR MaLR 0 365 2 391 323 86 21 chr5 34993754 34994045 -164636105 - L3 LINE CR1 -120 1457 1148 1658 156 0 0 chr5 34994046 34994296 -164635854 - HERVL LTR ERVL -1536 4118 3869 4356 142 12 9 chr5 34994319 34995000 -164635150 - HERVL LTR ERVL -1755 3899 3217 * 6222 114 2 28 chr5 34994997 34995915 -164634235 + HERVL LTR ERVL 4504 5397 -257 1476 134 0 0 chr5 34996054 34996263 -164633887 - AluSg/x SINE Alu -11 299 91 244 293 160 55 chr5 34996345 34996745 -164633405 - L3 LINE CR1 -696 881 440 233 95 0 24 chr5 34997294 34997336 -164632814 + (TC)n Simple_repeat Simple_repeat 2 42 0 24 0 0 0 chr5 34997394 34997418 -164632732 + AT_rich Low_complexity Low_complexity 1 24 0 1507 207 110 78 chr5 34997559 34998096 -164632054 + MLT2B3 LTR ERVL 1 554 0 301 243 6 136 chr5 34998254 34998321 -164631829 - MLT1F LTR MaLR -8 534 501 1731 218 51 32 chr5 34998321 34998813 -164631337 - MLT1D LTR MaLR 0 505 5 301 243 6 136 chr5 34998813 34998914 -164631236 - MLT1F LTR MaLR -41 501 388 242 275 77 92 chr5 34998929 34999136 -164631014 - MLT1F LTR MaLR -200 390 187 259 344 81 19 chr5 34999416 34999576 -164630574 + HERV16-B3 LTR ERVL 79 248 -4748 1579 235 147 5 chr5 34999743 35000172 -164629978 + MLT1E2 LTR MaLR 137 626 0 2253 89 4 0 chr5 35000364 35000645 -164629505 + AluSp SINE Alu 2 283 -30 3040 186 36 63 chr5 35002344 35003057 -164627093 - LTR8A LTR ERV1 0 727 34 840 214 31 48 chr5 35003204 35003433 -164626717 + MLT1E1 LTR MaLR 1 225 -429 1115 248 16 0 chr5 35003487 35003733 -164626417 + MLT1E1 LTR MaLR 405 654 0 230 285 29 80 chr5 35004515 35004652 -164625498 + MLT1K LTR MaLR 422 551 -37 207 0 0 0 chr5 35005095 35005118 -164625032 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 809 175 23 41 chr5 35005757 35005928 -164624222 + MER58A DNA MER1_type 26 193 -31 2433 63 7 0 chr5 35005928 35006228 -164623922 + AluY SINE Alu 1 302 -9 544 62 74 0 chr5 35006815 35006896 -164623254 + PABL_A-int LTR ERV1 1563 1649 -3366 1128 179 127 4 chr5 35006897 35007126 -164623024 - LTR8 LTR ERV1 -434 257 1 296 121 138 0 chr5 35007130 35007188 -164622962 + PABL_A-int LTR ERV1 3596 3661 -1354 1201 161 68 21 chr5 35007194 35007437 -164622713 + MSTB1 LTR MaLR 174 372 -3 189 195 0 0 chr5 35007659 35007700 -164622450 + (CATA)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr5 35008048 35008069 -164622081 + AT_rich Low_complexity Low_complexity 1 21 0 197 223 0 0 chr5 35008835 35008888 -164621262 + MIR SINE MIR 99 151 -57 6556 66 9 0 chr5 35009035 35009376 -164620774 - L1PA7 LINE L1 0 6154 5818 2911 16 0 0 chr5 35009376 35009694 -164620456 - AluYb8 SINE Alu 0 318 1 6556 66 9 0 chr5 35009694 35010984 -164619166 - L1PA7 LINE L1 -336 5818 4540 22 35 0 0 chr5 35011229 35011258 -164618892 + AT_rich Low_complexity Low_complexity 1 29 0 2333 107 7 0 chr5 35011792 35012102 -164618048 - AluSq SINE Alu -1 312 1 439 73 0 0 chr5 35014866 35014934 -164615216 + Alu SINE Alu 244 311 0 2293 79 10 3 chr5 35014946 35015238 -164614912 + AluSp SINE Alu 1 294 -19 226 276 79 0 chr5 35015876 35015952 -164614198 + MIR SINE MIR 170 251 -11 186 43 0 0 chr5 35016832 35016855 -164613295 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 2475 119 5 19 chr5 35019274 35019652 -164610498 - THE1C LTR MaLR 0 375 3 377 230 8 0 chr5 35019937 35020063 -164610087 + (TA)n Simple_repeat Simple_repeat 2 128 0 27 29 0 0 chr5 35020183 35020217 -164609933 + AT_rich Low_complexity Low_complexity 1 34 0 784 157 13 69 chr5 35020684 35020712 -164609438 + FAM SINE Alu 26 54 -267 2462 137 0 3 chr5 35020712 35021077 -164609073 - THE1B LTR MaLR 0 364 1 784 157 13 69 chr5 35021077 35021207 -164608943 + FAM SINE Alu 54 175 -10 413 196 54 22 chr5 35022268 35022360 -164607790 + L1MDa LINE L1 31 125 -6415 281 146 0 0 chr5 35022374 35022422 -164607728 - L1MDa LINE L1 -6452 88 41 1240 225 61 39 chr5 35022446 35022648 -164607502 + L1MDa LINE L1 115 330 -6210 2425 120 19 6 chr5 35022648 35023007 -164607143 + THE1B LTR MaLR 1 364 0 1240 225 61 39 chr5 35023007 35023164 -164606986 + L1MDa LINE L1 330 482 -6058 860 291 23 3 chr5 35024008 35024358 -164605792 + L1M4 LINE L1 4786 5142 -1004 464 248 86 17 chr5 35024541 35024843 -164605307 + L1MDa LINE L1 1140 1462 -5259 2779 168 34 12 chr5 35024945 35025510 -164604640 + L1MC2 LINE L1 5760 6336 -8 553 141 196 117 chr5 35026501 35026664 -164603486 + MER44D DNA MER2_type 2 447 -162 2166 149 22 3 chr5 35026664 35027032 -164603118 + THE1C LTR MaLR 1 375 0 9156 150 33 38 chr5 35027032 35028619 -164601531 + THE1C-int LTR MaLR 1 1580 0 614 138 0 0 chr5 35028619 35028713 -164601437 + THE1C LTR MaLR 1 94 -270 2193 141 5 30 chr5 35028713 35029018 -164601132 - L1P4 LINE L1 -468 5697 5403 2233 87 0 13 chr5 35029018 35029316 -164600834 - AluY SINE Alu -17 294 1 2193 141 5 30 chr5 35029316 35029406 -164600744 - L1P4 LINE L1 -762 5403 5312 229 204 11 45 chr5 35029633 35029721 -164600429 + GA-rich Low_complexity Low_complexity 2 86 0 2633 44 0 0 chr5 35029916 35030257 -164599893 - L1P LINE L1 -788 5358 5018 2697 45 0 0 chr5 35030257 35030575 -164599575 + L1PA4 LINE L1 5822 6152 -3 469 306 48 11 chr5 35030686 35030872 -164599278 + L2 LINE L2 2232 2424 -890 589 155 0 0 chr5 35031547 35031650 -164598500 + L1MA1 LINE L1 6200 6302 0 4890 184 97 75 chr5 35031734 35032308 -164597842 - L1MC3 LINE L1 -20 7765 7205 271 244 39 13 chr5 35032308 35032386 -164597764 - MLT1F1 LTR MaLR -453 114 35 4890 184 97 75 chr5 35032386 35033100 -164597050 - L1MC3 LINE L1 -580 7205 6371 367 243 72 45 chr5 35035282 35035369 -164594781 - L2 LINE L2 -6 3307 3215 2341 151 33 14 chr5 35035369 35035793 -164594357 - MSTB1 LTR MaLR 0 432 1 367 243 72 45 chr5 35035793 35035816 -164594334 - L2 LINE L2 -98 3215 3194 1848 120 0 4 chr5 35036251 35036510 -164593640 - AluSg SINE Alu -14 296 39 23 0 0 0 chr5 35036725 35036748 -164593402 + AT_rich Low_complexity Low_complexity 1 23 0 4653 128 30 26 chr5 35038998 35039774 -164590376 - MER4E LTR ERV1 0 779 1 228 342 92 8 chr5 35040040 35040160 -164589990 - MIR SINE MIR -16 246 117 325 342 41 50 chr5 35040334 35040653 -164589497 - L2 LINE L2 -75 3238 2923 351 279 47 58 chr5 35040724 35040933 -164589217 - L1MC3 LINE L1 -2266 5542 5335 1931 140 40 32 chr5 35040933 35041305 -164588845 - THE1C LTR MaLR 0 375 1 351 279 47 58 chr5 35041305 35041353 -164588797 - L1MC3 LINE L1 -2473 5335 5288 366 181 0 48 chr5 35041358 35041441 -164588709 + MADE1 DNA Mariner 2 80 0 24 32 0 0 chr5 35041515 35041546 -164588604 + AT_rich Low_complexity Low_complexity 1 31 0 2590 162 16 4 chr5 35041554 35042042 -164588108 - L1MA4 LINE L1 -5 6295 5802 27 49 0 0 chr5 35043318 35043359 -164586791 + AT_rich Low_complexity Low_complexity 1 41 0 442 289 152 34 chr5 35043597 35043985 -164586165 - HAL1b LINE L1 -844 504 71 1011 210 12 51 chr5 35045368 35045625 -164584525 - MLT1A2 LTR MaLR -127 247 1 373 271 47 47 chr5 35047053 35047182 -164582968 - MIR3 SINE MIR -32 176 48 402 21 0 0 chr5 35047237 35047284 -164582866 + (TG)n Simple_repeat Simple_repeat 2 48 0 1931 132 38 0 chr5 35047628 35047946 -164582204 + MSTA LTR MaLR 1 330 -98 613 282 24 0 chr5 35048153 35048323 -164581827 + MER97a DNA MER1_type? 4 177 -717 268 294 17 34 chr5 35048462 35048581 -164581569 - HAL1b LINE L1 -748 600 484 2043 165 78 47 chr5 35048723 35049196 -164580954 - L1MC2 LINE L1 -18 6326 5839 1503 244 52 21 chr5 35049199 35049621 -164580529 + LTR47B LTR ERVL 1 435 -8 2535 282 28 25 chr5 35049629 35050123 -164580027 - L1MC2 LINE L1 -494 5839 5348 1735 123 69 4 chr5 35050123 35050399 -164579751 - AluSc SINE Alu -15 294 1 2535 282 28 25 chr5 35050399 35051075 -164579075 - L1MC2 LINE L1 -985 5348 4658 2022 142 0 0 chr5 35051075 35051370 -164578780 - AluSx SINE Alu -12 300 6 2535 282 28 25 chr5 35051370 35051552 -164578598 - L1MC2 LINE L1 -1675 4658 4478 21 36 0 0 chr5 35051724 35051752 -164578398 + AT_rich Low_complexity Low_complexity 1 28 0 1582 169 40 7 chr5 35051802 35052122 -164578028 - AluSx SINE Alu 0 329 1 789 338 68 42 chr5 35053237 35054008 -164576142 - L2 LINE L2 0 3313 2516 2025 158 42 14 chr5 35054027 35054381 -164575769 + THE1B LTR MaLR 1 364 0 10625 124 11 3 chr5 35054382 35055934 -164574216 + THE1B-int LTR MaLR 2 1566 -14 2239 120 46 6 chr5 35055941 35056291 -164573859 + THE1B LTR MaLR 1 364 0 1038 102 11 17 chr5 35056775 35056820 -164573330 + (TTTC)n Simple_repeat Simple_repeat 1 220 0 1038 102 11 17 chr5 35056820 35056997 -164573153 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 2142 110 3 0 chr5 35062267 35062558 -164567592 + AluSg SINE Alu 1 292 -18 1627 104 4 24 chr5 35062859 35063108 -164567042 + L1PA11 LINE L1 5931 6174 0 493 298 35 6 chr5 35063896 35064067 -164566083 + L1MA7 LINE L1 1216 1391 -6105 2308 286 31 52 chr5 35064260 35065707 -164564443 + L1MA7 LINE L1 2022 3122 -4443 2126 189 44 7 chr5 35065740 35066148 -164564002 + MSTB1 LTR MaLR 10 432 0 5680 233 64 28 chr5 35066204 35066476 -164563674 + L1MA7 LINE L1 3176 3437 -4128 2319 86 0 3 chr5 35066476 35066777 -164563373 + AluSq SINE Alu 1 300 -13 5680 233 64 28 chr5 35066777 35069310 -164560840 + L1MA7 LINE L1 3437 6130 -1435 4198 174 31 29 chr5 35069313 35070288 -164559862 + L1MA7 LINE L1 6732 7708 -2 23 0 0 0 chr5 35070288 35070311 -164559839 + AT_rich Low_complexity Low_complexity 1 23 0 1770 264 42 40 chr5 35070318 35071134 -164559016 - L1MC/D LINE L1 -743 6198 5569 2797 3 0 3 chr5 35071134 35071439 -164558711 - AluYa5 SINE Alu -7 304 1 1770 264 42 40 chr5 35071439 35071951 -164558199 - L1MC/D LINE L1 -1372 5569 5059 5340 91 3 8 chr5 35072009 35072782 -164557368 + L1PA8A LINE L1 5351 6119 -12 329 238 0 0 chr5 35072821 35072901 -164557249 - L1MC/D LINE L1 -1983 4958 4879 273 269 75 42 chr5 35072897 35073109 -164557041 - L1MC/D LINE L1 -4639 2304 2086 * 458 266 14 14 chr5 35073179 35073318 -164556832 - L1MC/D LINE L1 -5186 1237 1099 423 349 18 40 chr5 35073421 35073693 -164556457 - L1MC/D LINE L1 -5841 582 317 422 278 93 66 chr5 35073701 35074065 -164556085 + MLT1D LTR MaLR 1 374 -131 348 294 33 0 chr5 35074306 35074398 -164555752 + HERV16 LTR ERVL 6 100 -4896 814 338 108 10 chr5 35074604 35075216 -164554934 + HERV16 LTR ERVL 686 1357 -3639 1243 303 54 25 chr5 35075261 35075831 -164554319 + HERV16 LTR ERVL 1682 2323 -2776 782 235 6 45 chr5 35075946 35076125 -164554025 - AluJo SINE Alu -137 175 4 241 302 78 78 chr5 35076131 35076426 -164553724 - L2 LINE L2 -18 3295 3001 211 133 0 22 chr5 35076969 35077014 -164553136 + (TG)n Simple_repeat Simple_repeat 1 44 0 342 287 0 0 chr5 35077438 35077553 -164552597 + (TA)n Simple_repeat Simple_repeat 1 115 0 1103 242 54 102 chr5 35078450 35078687 -164551463 + L1ME1 LINE L1 5148 5395 -771 2398 95 3 0 chr5 35078687 35078993 -164551157 + AluSc SINE Alu 1 307 -2 1103 242 54 102 chr5 35078993 35079088 -164551062 + L1ME1 LINE L1 5395 5493 -673 2318 113 0 3 chr5 35079088 35079398 -164550752 + AluSx SINE Alu 1 309 -3 1103 242 54 102 chr5 35079398 35080013 -164550137 + L1ME1 LINE L1 5493 6054 -112 1859 115 11 4 chr5 35080176 35080436 -164549714 + AluSq SINE Alu 1 262 -51 1083 116 0 0 chr5 35080439 35080586 -164549564 + AluSp/q SINE Alu 160 306 -7 1040 198 33 67 chr5 35080586 35080611 -164549539 + L1MC4a LINE L1 6251 6275 -1533 2095 130 72 23 chr5 35080611 35080958 -164549192 - THE1B LTR MaLR 0 364 1 1040 198 33 67 chr5 35080958 35081291 -164548859 + L1MC4a LINE L1 6275 6597 -1211 868 154 143 42 chr5 35081328 35081587 -164548563 + LTR12 LTR ERV1 1 285 -429 305 191 0 0 chr5 35081587 35081650 -164548500 + LTR30 LTR ERV1 552 614 -108 712 164 25 0 chr5 35081651 35081773 -164548377 + LTR12 LTR ERV1 350 474 -240 3394 240 84 18 chr5 35081816 35082946 -164547204 + L1MC4a LINE L1 6603 7807 -1 426 20 0 0 chr5 35083014 35083065 -164547085 + (TG)n Simple_repeat Simple_repeat 2 52 0 2071 133 3 0 chr5 35083329 35083629 -164546521 - AluSx SINE Alu -11 301 1 563 255 116 35 chr5 35083673 35083991 -164546159 - L1M4 LINE L1 -3104 3042 2699 516 311 67 77 chr5 35084246 35084741 -164545409 - HAL1 LINE L1 -905 1602 1113 233 263 0 26 chr5 35084854 35084930 -164545220 - HAL1 LINE L1 -1471 1036 963 280 196 0 0 chr5 35085651 35085707 -164544443 - MER116 DNA Mariner -17 63 8 2375 74 0 43 chr5 35086896 35087221 -164542929 + AluY SINE Alu 1 311 0 512 234 122 11 chr5 35087320 35087735 -164542415 - MER69 DNA AcHobo 0 2526 1992 1368 320 13 11 chr5 35087811 35088345 -164541805 - MER69 DNA AcHobo -1870 656 122 1192 125 0 0 chr5 35088380 35088548 -164541602 - AluSx SINE Alu -9 301 134 550 163 0 0 chr5 35088548 35088634 -164541516 - AluSx SINE Alu -227 86 1 214 178 0 22 chr5 35089851 35089896 -164540254 + CT-rich Low_complexity Low_complexity 2 45 0 234 0 0 0 chr5 35089896 35089922 -164540228 + (CA)n Simple_repeat Simple_repeat 1 26 0 26 50 0 0 chr5 35089968 35090008 -164540142 + AT_rich Low_complexity Low_complexity 1 40 0 1794 180 38 34 chr5 35090150 35090706 -164539444 - MLT2A2 LTR ERVL 0 554 1 6816 106 6 4 chr5 35090706 35091701 -164538449 - HERVL-A2 LTR ERVL 0 5654 4658 5653 102 43 33 chr5 35091697 35091754 -164538396 - HERVL-A2 LTR ERVL -1710 3944 3889 * 2199 94 3 35 chr5 35091754 35092072 -164538078 - AluSc SINE Alu -1 308 1 5653 102 43 33 chr5 35092072 35092935 -164537215 - HERVL-A2 LTR ERVL -1765 3889 3014 291 250 5 165 chr5 35094750 35094831 -164535319 + MER5B DNA MER1_type 1 29 -149 1998 152 116 21 chr5 35094831 35095220 -164534930 - MSTA LTR MaLR -2 426 1 291 250 5 165 chr5 35095220 35095350 -164534800 + MER5B DNA MER1_type 29 178 0 28 61 0 0 chr5 35096495 35096544 -164533606 + AT_rich Low_complexity Low_complexity 1 49 0 5151 161 22 7 chr5 35096996 35098312 -164531838 - L1PA16 LINE L1 0 6166 4839 331 310 139 19 chr5 35098526 35098684 -164531466 + MIR SINE MIR 46 222 -40 348 64 0 0 chr5 35098976 35099023 -164531127 + (CA)n Simple_repeat Simple_repeat 1 47 0 192 179 0 0 chr5 35099995 35100034 -164530116 + CT-rich Low_complexity Low_complexity 1 39 0 1567 175 7 41 chr5 35100185 35100502 -164529648 + AluJo SINE Alu 1 307 0 825 190 0 35 chr5 35101349 35101523 -164528627 - MLT1B LTR MaLR 0 390 223 704 187 97 93 chr5 35101528 35101785 -164528365 - MLT1B LTR MaLR -127 263 6 1860 63 0 67 chr5 35102319 35102610 -164527540 + AluY SINE Alu 44 317 0 2161 109 0 31 chr5 35104112 35104434 -164525716 + AluSq SINE Alu 1 312 -1 9377 26 3 211 chr5 35104635 35106396 -164523754 + SVA Other Other 7 1409 0 2038 149 0 0 chr5 35107309 35107605 -164522545 + AluSx SINE Alu 1 296 -16 436 252 111 7 chr5 35107970 35108105 -164522045 + MLT1A2 LTR MaLR 27 175 -199 205 250 16 16 chr5 35108108 35108172 -164521978 + C-rich Low_complexity Low_complexity 4 67 0 2226 122 0 13 chr5 35108302 35108613 -164521537 + AluSx SINE Alu 1 307 -5 239 167 33 0 chr5 35108751 35108811 -164521339 + (TATAA)n Simple_repeat Simple_repeat 4 65 0 24 0 0 0 chr5 35108913 35108937 -164521213 + AT_rich Low_complexity Low_complexity 1 24 0 849 54 9 0 chr5 35110671 35110782 -164519368 - L1PA4 LINE L1 -2 6153 6042 2254 121 36 6 chr5 35110782 35111142 -164519008 - L1PA15 LINE L1 -4 6161 5788 1838 164 4 0 chr5 35111765 35112069 -164518081 + AluSx SINE Alu 1 305 0 314 247 0 12 chr5 35112722 35112807 -164517343 + MLT1I LTR MaLR 326 409 0 2247 110 0 0 chr5 35113507 35113799 -164516351 + AluSx SINE Alu 1 292 -20 240 329 0 0 chr5 35114248 35114321 -164515829 - MIR SINE MIR -1 261 189 370 319 35 6 chr5 35115614 35115783 -164514367 + MLT1J LTR MaLR 44 217 -294 2142 117 0 10 chr5 35116408 35116699 -164513451 - AluSx SINE Alu -24 288 1 881 254 116 22 chr5 35116897 35117252 -164512898 - MLT2B1 LTR ERVL -127 393 6 2070 133 0 3 chr5 35117738 35118024 -164512126 + AluSx SINE Alu 1 285 -27 26 0 0 0 chr5 35118034 35118060 -164512090 + AT_rich Low_complexity Low_complexity 1 26 0 341 346 44 15 chr5 35118280 35118416 -164511734 + MIR3 SINE MIR 20 159 -49 378 363 81 42 chr5 35119205 35119538 -164510612 - L2 LINE L2 -31 3241 2896 2119 129 38 32 chr5 35120495 35120819 -164509331 + THE1C LTR MaLR 1 329 -46 1798 136 74 40 chr5 35120819 35121171 -164508979 - THE1B LTR MaLR 0 364 1 2119 129 38 32 chr5 35121171 35121219 -164508931 + THE1C LTR MaLR 329 375 0 246 348 116 49 chr5 35122184 35122451 -164507699 + L3 LINE CR1 243 527 -1050 1527 166 80 9 chr5 35122941 35123290 -164506860 - L1MA8 LINE L1 -4 6287 5914 716 220 65 0 chr5 35123358 35123434 -164506716 + L1MA9 LINE L1 6077 6147 -165 264 30 0 0 chr5 35123434 35123467 -164506683 + (CA)n Simple_repeat Simple_repeat 2 34 0 716 220 65 0 chr5 35123467 35123576 -164506574 + L1MA9 LINE L1 6147 6274 -38 8538 138 16 6 chr5 35126615 35128826 -164501324 - L1PA10 LINE L1 -5 6163 3919 999 135 13 0 chr5 35128827 35128983 -164501167 + L1P LINE L1 3573 3730 -2416 717 97 18 9 chr5 35128983 35129096 -164501054 - MLT2B2 LTR ERVL -401 114 1 205 255 0 0 chr5 35129256 35129307 -164500843 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 204 97 0 0 chr5 35129709 35129740 -164500410 + (CAT)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr5 35130717 35130742 -164499408 + AT_rich Low_complexity Low_complexity 1 25 0 221 239 14 42 chr5 35130764 35130906 -164499244 + (TTTA)n Simple_repeat Simple_repeat 1 138 0 249 188 62 0 chr5 35131705 35131801 -164498349 + (TA)n Simple_repeat Simple_repeat 2 103 0 24 0 0 0 chr5 35132364 35132388 -164497762 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 35132964 35132986 -164497164 + AT_rich Low_complexity Low_complexity 1 22 0 202 367 143 0 chr5 35134003 35134101 -164496049 - MIR SINE MIR -96 166 55 1142 142 69 37 chr5 35134539 35134757 -164495393 - AluJb SINE Alu -1 311 87 2437 90 0 3 chr5 35135113 35135423 -164494727 + AluSc SINE Alu 1 309 0 2227 52 0 0 chr5 35136127 35136399 -164493751 + AluY SINE Alu 30 301 -10 1161 176 19 14 chr5 35137068 35137284 -164492866 - AluJo SINE Alu -14 298 82 26 0 0 0 chr5 35139314 35139340 -164490810 + AT_rich Low_complexity Low_complexity 1 26 0 242 356 59 17 chr5 35139555 35139673 -164490477 + L2 LINE L2 3147 3269 -3 966 213 0 14 chr5 35139729 35139936 -164490214 - L1PB4 LINE L1 -1 6155 5952 291 336 96 52 chr5 35140534 35140763 -164489387 - MER102b DNA MER1_type 0 341 103 1475 227 98 16 chr5 35140816 35141182 -164488968 - MSTD LTR MaLR 0 396 1 23 33 0 0 chr5 35141349 35141379 -164488771 + AT_rich Low_complexity Low_complexity 1 30 0 4393 280 67 30 chr5 35141530 35143450 -164486700 - L1MCa LINE L1 -1597 4967 3121 2331 83 0 0 chr5 35143450 35143750 -164486400 - AluY SINE Alu -11 300 1 4393 280 67 30 chr5 35143750 35144774 -164485376 - L1MCa LINE L1 -3443 3121 2137 1878 95 4 8 chr5 35144774 35145036 -164485114 - AluY SINE Alu -2 309 49 4393 280 67 30 chr5 35145036 35146191 -164483959 - L1MCa LINE L1 -4427 2137 570 393 331 46 61 chr5 35146459 35146722 -164483428 - L1MCa LINE L1 -5613 432 174 3615 186 56 6 chr5 35146752 35147450 -164482700 + ERVL-B1 LTR ERVL 3212 3944 -1820 7652 185 71 38 chr5 35147468 35148878 -164481272 + ERVL-B1 LTR ERVL 4066 5538 -226 2344 140 19 73 chr5 35148878 35149335 -164480815 - L1MA8 LINE L1 -18 6273 5846 1877 160 16 0 chr5 35149335 35149641 -164480509 - AluJb SINE Alu -1 311 1 2344 140 19 73 chr5 35149641 35149703 -164480447 - L1MA8 LINE L1 -445 5846 5782 7652 185 71 38 chr5 35149703 35149931 -164480219 + ERVL-B1 LTR ERVL 5538 5757 -7 858 254 21 0 chr5 35149931 35150120 -164480030 + MLT2B1 LTR ERVL 1 193 -327 801 244 6 0 chr5 35150103 35150279 -164479871 + MLT2B2 LTR ERVL 339 515 0 * 590 223 18 0 chr5 35150629 35150741 -164479409 - MER81 DNA DNA 0 114 1 2413 197 36 53 chr5 35151728 35152257 -164477893 - MLT2B1 LTR ERVL 0 520 1 572 307 67 4 chr5 35152272 35152497 -164477653 - LTR16A LTR ERVL 0 450 212 2043 133 0 0 chr5 35152612 35152923 -164477227 + AluSq SINE Alu 1 311 0 280 267 12 0 chr5 35152939 35153025 -164477125 - LTR16A LTR ERVL -343 107 21 22 35 0 0 chr5 35154080 35154109 -164476041 + AT_rich Low_complexity Low_complexity 1 29 0 22 99 0 0 chr5 35154788 35154859 -164475291 + AT_rich Low_complexity Low_complexity 1 71 0 640 175 45 126 chr5 35154993 35155216 -164474934 + L1MA9 LINE L1 6070 6274 -38 29 28 0 0 chr5 35155216 35155252 -164474898 + AT_rich Low_complexity Low_complexity 1 36 0 2438 65 7 0 chr5 35155925 35156233 -164473917 - AluY SINE Alu 0 311 2 198 0 0 0 chr5 35157013 35157035 -164473115 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 458 231 149 8 chr5 35159005 35159139 -164471011 - MLT1J2 LTR MaLR -234 216 64 22 35 0 0 chr5 35159297 35159326 -164470824 + AT_rich Low_complexity Low_complexity 1 29 0 305 85 0 21 chr5 35159429 35159476 -164470674 - Alu SINE Alu -13 289 244 242 208 19 0 chr5 35159464 35159517 -164470633 - AluSg/x SINE Alu -133 169 116 * 2203 102 7 0 chr5 35160170 35160465 -164469685 + AluSc SINE Alu 1 297 -12 2263 115 0 0 chr5 35160470 35160774 -164469376 + AluSq SINE Alu 1 304 -9 1310 129 0 15 chr5 35162152 35162354 -164467796 - THE1-int LTR MaLR -262 1318 1120 468 145 3 0 chr5 35162982 35163084 -164467066 - L1P5 LINE L1 -448 5708 5606 23 33 0 0 chr5 35163177 35163207 -164466943 + AT_rich Low_complexity Low_complexity 1 30 0 441 182 40 30 chr5 35163701 35163800 -164466350 - MER53 DNA DNA -88 101 2 737 269 74 52 chr5 35164183 35164588 -164465562 - L2 LINE L2 -71 3242 2829 290 181 0 28 chr5 35164656 35164728 -164465422 + (CAGAGA)n Simple_repeat Simple_repeat 3 72 0 686 79 0 20 chr5 35164778 35164879 -164465271 + MER4A LTR ERV1 1 99 -565 1531 146 211 38 chr5 35164879 35165221 -164464929 + MER4A LTR ERV1 262 662 -2 601 303 89 16 chr5 35165222 35165536 -164464614 - L2 LINE L2 -518 2796 2460 280 206 33 76 chr5 35167085 35167177 -164462973 - L2 LINE L2 0 3313 3226 806 316 120 31 chr5 35167515 35167579 -164462571 - L2 LINE L2 -8 3305 3248 1977 116 0 0 chr5 35167579 35167855 -164462295 + AluSx SINE Alu 31 306 -6 806 316 120 31 chr5 35167855 35168214 -164461936 - L2 LINE L2 -65 3248 2844 1468 221 0 26 chr5 35168573 35168876 -164461274 + AluJo SINE Alu 1 295 -17 204 200 0 0 chr5 35168894 35168939 -164461211 + (CATA)n Simple_repeat Simple_repeat 2 46 0 252 0 0 0 chr5 35169920 35169948 -164460202 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2405 45 0 10 chr5 35169951 35170241 -164459909 - AluY SINE Alu -24 287 1 1721 97 32 4 chr5 35170437 35170685 -164459465 - AluSx SINE Alu -12 300 46 1146 184 25 72 chr5 35170685 35171039 -164459111 - MER31A LTR ERV1 -48 437 7 198 196 22 0 chr5 35171108 35171154 -164458996 + L2 LINE L2 3265 3311 -2 239 261 80 36 chr5 35171322 35171460 -164458690 - MLT1K LTR MaLR -115 473 330 456 344 33 28 chr5 35171513 35171728 -164458422 - MLT1K LTR MaLR -340 248 33 204 349 30 0 chr5 35171756 35171822 -164458328 - L2 LINE L2 -273 2999 2932 21 0 0 0 chr5 35172046 35172067 -164458083 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr5 35172739 35172778 -164457372 + AT_rich Low_complexity Low_complexity 1 39 0 287 250 53 38 chr5 35173219 35173351 -164456799 + MLT1I LTR MaLR 1 134 -275 456 285 6 24 chr5 35173965 35174130 -164456020 - MER46C DNA MER2_type -29 309 148 3323 206 80 75 chr5 35175284 35175638 -164454512 - Charlie1 DNA MER1_type -16 2745 2394 2360 58 41 0 chr5 35175638 35175933 -164454217 + AluY SINE Alu 1 307 -4 3323 206 80 75 chr5 35175933 35176822 -164453328 - Charlie1 DNA MER1_type -367 2394 1496 273 241 0 0 chr5 35176840 35176894 -164453256 - Charlie1 DNA MER1_type -2705 56 3 2107 123 7 0 chr5 35178424 35178726 -164451424 + AluSx SINE Alu 1 304 -8 25 65 0 0 chr5 35179028 35179074 -164451076 + AT_rich Low_complexity Low_complexity 1 46 0 309 371 81 9 chr5 35179417 35179627 -164450523 - MIR SINE MIR -26 236 12 2625 135 16 0 chr5 35181779 35182208 -164447942 + L1PB1 LINE L1 5712 6147 -4 442 160 0 85 chr5 35182367 35182461 -164447689 - LTR29 LTR ERV1 -72 550 465 1004 189 26 0 chr5 35182469 35182659 -164447491 - L1PA16 LINE L1 -1 6165 5971 4615 139 17 4 chr5 35182659 35183419 -164446731 - L1PA16 LINE L1 -135 7450 6681 * 7569 160 38 0 chr5 35183413 35184639 -164445511 - L1PA16 LINE L1 -5194 2371 1099 580 161 45 0 chr5 35184636 35184748 -164445402 - L1PA16 LINE L1 -7432 133 17 * 496 154 34 51 chr5 35184752 35184814 -164445336 - L1PA16 LINE L1 -12 6154 6093 2276 115 47 16 chr5 35184814 35185178 -164444972 - THE1C LTR MaLR 0 375 1 496 154 34 51 chr5 35185178 35185232 -164444918 - L1PA16 LINE L1 -73 6093 6040 4129 259 75 37 chr5 35185259 35187533 -164442617 + L1M4 LINE L1 152 2649 -4176 2365 139 14 0 chr5 35187547 35187906 -164442244 + THE1B LTR MaLR 1 364 0 9432 143 41 5 chr5 35187906 35189431 -164440719 + THE1B-int LTR MaLR 1 1580 0 2150 150 8 33 chr5 35189436 35189803 -164440347 + THE1B LTR MaLR 7 364 0 360 206 0 0 chr5 35189805 35189896 -164440254 + L1M4 LINE L1 2621 2711 -3933 484 145 0 0 chr5 35189906 35189975 -164440175 + AluS SINE Alu 1 69 -244 369 208 14 69 chr5 35190076 35190206 -164439944 + L1M4 LINE L1 3055 3178 -3466 2503 114 8 0 chr5 35190206 35190558 -164439592 + THE1A LTR MaLR 1 355 0 369 208 14 69 chr5 35190558 35190571 -164439579 + L1M4 LINE L1 3178 3190 -3454 1735 149 45 36 chr5 35190573 35190881 -164439269 - AluSx SINE Alu -1 311 1 1724 196 6 9 chr5 35191064 35191381 -164438769 + L1P3 LINE L1 3 318 -5557 3487 136 9 2 chr5 35191382 35191940 -164438210 + L1PA10 LINE L1 5596 6157 -11 1435 226 37 8 chr5 35191956 35192446 -164437704 + L1M4 LINE L1 3219 3722 -2922 21 36 0 0 chr5 35193092 35193120 -164437030 + AT_rich Low_complexity Low_complexity 1 28 0 270 254 45 0 chr5 35193182 35193249 -164436901 + L2 LINE L2 3244 3313 0 279 308 39 50 chr5 35194666 35194848 -164435302 + L2 LINE L2 3005 3184 -129 2200 72 7 4 chr5 35195359 35195637 -164434513 + AluSg SINE Alu 1 279 -31 231 88 0 0 chr5 35195748 35195782 -164434368 + (CA)n Simple_repeat Simple_repeat 2 35 0 253 354 19 21 chr5 35195830 35195949 -164434201 - MIR SINE MIR -87 121 4 362 312 22 23 chr5 35196148 35196344 -164433806 + L1ME1 LINE L1 5972 6163 -1 392 342 35 26 chr5 35198163 35198391 -164431759 - L2 LINE L2 -359 2955 2726 257 264 47 85 chr5 35198690 35198819 -164431331 - MLT1I LTR MaLR -57 352 229 21 0 0 0 chr5 35199140 35199161 -164430989 + AT_rich Low_complexity Low_complexity 1 21 0 310 302 112 12 chr5 35199610 35199779 -164430371 + L1M4 LINE L1 4314 4499 -2145 944 133 55 17 chr5 35199877 35200058 -164430092 + MLT2C2 LTR ERVL 1 188 -276 5216 51 1 5 chr5 35200063 35200725 -164429425 - L1PA5 LINE L1 0 6154 5495 2016 152 42 51 chr5 35201060 35201606 -164428544 - pTR5 LTR ERV1 -1155 1283 743 24 0 0 0 chr5 35202428 35202452 -164427698 + AT_rich Low_complexity Low_complexity 1 24 0 734 183 33 22 chr5 35203081 35203261 -164426889 - L1MC3 LINE L1 -19 7766 7585 1806 185 91 8 chr5 35203730 35204103 -164426047 + MSTB LTR MaLR 23 426 0 871 247 18 40 chr5 35204248 35204475 -164425675 + MER8 DNA MER2_type 18 239 0 1124 221 88 15 chr5 35204816 35205156 -164424994 + MLT1A1 LTR MaLR 1 365 0 180 0 0 0 chr5 35205160 35205180 -164424970 + (A)n Simple_repeat Simple_repeat 1 20 0 207 0 0 0 chr5 35205238 35205261 -164424889 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 4533 146 18 8 chr5 35205261 35205634 -164424516 - L1PA16 LINE L1 0 6166 5798 306 0 0 0 chr5 35205634 35205668 -164424482 + (TG)n Simple_repeat Simple_repeat 2 35 0 4533 146 18 8 chr5 35205668 35206067 -164424083 - L1PA16 LINE L1 -368 5798 5386 1387 97 0 0 chr5 35206715 35206922 -164423228 + L1PA13 LINE L1 5968 6174 0 301 273 87 77 chr5 35207134 35207317 -164422833 - L1ME3A LINE L1 -23 6147 5963 485 132 13 0 chr5 35207773 35207849 -164422301 - MADE1 DNA Mariner -2 78 2 294 272 33 0 chr5 35208190 35208282 -164421868 + LTR16A1 LTR ERVL 43 137 -320 565 151 25 34 chr5 35208391 35208510 -164421640 + L1MB1 LINE L1 4561 4678 -1468 4141 193 45 4 chr5 35208513 35209783 -164420367 + L1MB1 LINE L1 4835 6165 -3 240 86 0 0 chr5 35210021 35210056 -164420094 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 1417 190 68 45 chr5 35210096 35210406 -164419744 + MLT1A1 LTR MaLR 5 325 -40 2331 130 8 13 chr5 35210406 35210783 -164419367 - THE1C LTR MaLR 0 375 1 1417 190 68 45 chr5 35210783 35210825 -164419325 + MLT1A1 LTR MaLR 325 365 0 1456 168 107 41 chr5 35211400 35211745 -164418405 - MSTB1 LTR MaLR -13 419 52 451 151 12 12 chr5 35211971 35212057 -164418093 - MSTB1 LTR MaLR -346 86 1 27 0 0 0 chr5 35212148 35212175 -164417975 + AT_rich Low_complexity Low_complexity 1 27 0 1855 104 4 22 chr5 35212488 35212756 -164417394 + AluSq SINE Alu 35 297 -16 853 248 87 60 chr5 35213158 35213493 -164416657 - MER2 DNA MER2_type 0 345 2 1630 181 3 47 chr5 35213540 35213861 -164416289 - AluJb SINE Alu -5 307 1 368 209 0 0 chr5 35214002 35214069 -164416081 + MSTD LTR MaLR 15 81 -315 915 221 0 0 chr5 35214069 35214241 -164415909 - FRAM SINE Alu 0 176 5 4919 61 0 1 chr5 35214686 35215491 -164414659 - L1P2 LINE L1 -605 5549 4746 704 187 40 76 chr5 35215491 35215689 -164414461 + MLT2C1 LTR ERVL 188 378 -19 610 125 44 15 chr5 35215773 35215979 -164414171 + (TAGA)n Simple_repeat Simple_repeat 1 212 0 285 119 0 0 chr5 35215979 35216021 -164414129 + MLT2C1 LTR ERVL 417 458 -6 497 116 23 0 chr5 35216465 35216551 -164413599 + L1MA1 LINE L1 6215 6302 0 2407 135 28 26 chr5 35216869 35217212 -164412938 - L1MA3 LINE L1 0 6305 5959 252 0 0 0 chr5 35217212 35217240 -164412910 + (TA)n Simple_repeat Simple_repeat 2 29 0 2407 135 28 26 chr5 35217240 35217356 -164412794 - L1MA3 LINE L1 -346 5959 5845 2172 165 92 8 chr5 35217484 35217877 -164412273 - MSTA LTR MaLR 0 428 3 263 318 110 35 chr5 35218891 35219064 -164411086 - L2 LINE L2 -1 3271 3086 529 163 87 0 chr5 35219791 35219883 -164410267 - Tigger3(Golem) DNA MER2_type -1 3028 2929 428 238 10 0 chr5 35219888 35219989 -164410161 - HERVL40 LTR ERVL -948 4582 4481 2928 147 129 17 chr5 35219991 35220643 -164409507 - Tigger3(Golem) DNA MER2_type -95 2934 2210 282 56 0 0 chr5 35220887 35220923 -164409227 + (CA)n Simple_repeat Simple_repeat 1 36 0 2178 272 52 63 chr5 35220990 35221928 -164408222 - HERVL40 LTR ERVL -95 5435 4508 620 271 68 6 chr5 35221922 35222263 -164407887 - HERVL40 LTR ERVL -960 4570 4191 * 2343 282 78 37 chr5 35222549 35223552 -164406598 - HERVL40 LTR ERVL -1438 4092 3049 785 277 40 16 chr5 35223766 35224015 -164406135 - HERVL40 LTR ERVL -2497 3033 2779 292 340 13 26 chr5 35224708 35224864 -164405286 - HERVL40 LTR ERVL -4145 1385 1232 2157 158 34 8 chr5 35224872 35225258 -164404892 - MER57A LTR ERV1 0 403 8 538 289 67 54 chr5 35225263 35225578 -164404572 - HERVL40 LTR ERVL -4307 1223 905 617 389 42 0 chr5 35225835 35226118 -164404032 - L2 LINE L2 -527 2787 2493 34 0 0 0 chr5 35226740 35226774 -164403376 + AT_rich Low_complexity Low_complexity 1 34 0 3926 137 74 55 chr5 35228331 35229288 -164400862 - pTR5 LTR ERV1 0 2606 1524 306 0 0 0 chr5 35229694 35229728 -164400422 + (TC)n Simple_repeat Simple_repeat 1 34 0 396 0 0 0 chr5 35229729 35229773 -164400377 + (TG)n Simple_repeat Simple_repeat 2 45 0 1845 201 68 5 chr5 35229824 35230192 -164399958 + MSTD LTR MaLR 1 391 -5 2232 119 6 3 chr5 35231743 35232055 -164398095 - AluSq SINE Alu 0 313 1 1706 184 0 13 chr5 35232084 35232400 -164397750 - AluJo SINE Alu 0 312 1 32 0 0 0 chr5 35232692 35232724 -164397426 + AT_rich Low_complexity Low_complexity 1 32 0 840 137 0 34 chr5 35232874 35233020 -164397130 - LTR39 LTR ERV1 -605 178 38 312 214 0 0 chr5 35233691 35233761 -164396389 + MLT1L LTR MaLR 539 608 -7 280 287 32 69 chr5 35233770 35233958 -164396192 + L2 LINE L2 1746 1926 -1388 2101 104 45 3 chr5 35233998 35234287 -164395863 - AluSq SINE Alu -12 301 1 274 344 71 50 chr5 35234529 35234852 -164395298 + L2 LINE L2 2266 2595 -719 1020 226 84 25 chr5 35235214 35235537 -164394613 + MER2 DNA MER2_type 2 343 -1 2391 87 3 0 chr5 35236126 35236436 -164393714 + AluY SINE Alu 1 311 0 873 262 34 86 chr5 35236658 35237043 -164393107 + MLT1A1 LTR MaLR 1 365 0 5436 192 57 48 chr5 35237168 35238017 -164392133 + L1MC1 LINE L1 19 886 -5540 216 97 0 0 chr5 35238017 35238048 -164392102 + (CA)n Simple_repeat Simple_repeat 2 32 0 5436 192 57 48 chr5 35238048 35238513 -164391637 + L1MC1 LINE L1 886 1345 -5081 6246 98 16 3 chr5 35238605 35239504 -164390646 + L1PA10 LINE L1 5254 6163 -5 5348 271 78 20 chr5 35239520 35241331 -164388819 + L1MC1 LINE L1 1212 2917 -3509 1872 173 144 5 chr5 35241331 35241707 -164388443 - MSTA LTR MaLR 0 428 1 5348 271 78 20 chr5 35241707 35242454 -164387696 + L1MC1 LINE L1 2917 5073 -1353 3114 172 47 10 chr5 35242453 35243224 -164386926 + L1MC1 LINE L1 5386 6177 -436 * 1298 66 6 11 chr5 35243368 35243549 -164386601 + AluY SINE Alu 126 305 -6 243 0 0 0 chr5 35243928 35243955 -164386195 + (TG)n Simple_repeat Simple_repeat 2 28 0 26 0 0 0 chr5 35245720 35245746 -164384404 + AT_rich Low_complexity Low_complexity 1 26 0 1752 185 3 0 chr5 35245905 35246192 -164383958 - AluSx SINE Alu -16 296 9 241 325 52 56 chr5 35246435 35246684 -164383466 + MER102b DNA MER1_type 84 331 -10 42017 38 24 2 chr5 35246701 35252718 -164377432 + L1PA3 LINE L1 2 6155 0 1435 201 64 56 chr5 35253050 35253443 -164376707 - MSTD LTR MaLR 0 396 1 1258 19 6 19 chr5 35253591 35253750 -164376400 - L1PA4 LINE L1 0 6155 5999 493 199 46 46 chr5 35254034 35254165 -164375985 + L1MA9 LINE L1 6142 6272 -40 32 57 0 0 chr5 35254409 35254462 -164375688 + AT_rich Low_complexity Low_complexity 1 53 0 884 169 0 12 chr5 35254607 35254767 -164375383 + L1PB3 LINE L1 5995 6152 -2 3737 82 8 6 chr5 35254996 35255506 -164374644 - MER9 LTR ERVK 0 511 1 224 250 0 0 chr5 35256687 35256739 -164373411 + A-rich Low_complexity Low_complexity 1 52 0 25 65 0 0 chr5 35257822 35257868 -164372282 + AT_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr5 35258957 35258986 -164371164 + AT_rich Low_complexity Low_complexity 1 29 0 415 300 70 25 chr5 35258996 35259196 -164370954 + L1ME1 LINE L1 5952 6160 -6 1203 231 140 3 chr5 35259703 35260024 -164370126 - MLT1A1 LTR MaLR 0 365 1 255 356 132 15 chr5 35261282 35261487 -164368663 + MIR SINE MIR 2 230 -32 21 0 0 0 chr5 35262168 35262189 -164367961 + AT_rich Low_complexity Low_complexity 1 21 0 920 241 22 0 chr5 35262373 35262651 -164367499 - MER33 DNA MER1_type -15 309 26 184 366 14 0 chr5 35262909 35262980 -164367170 - MIR3 SINE MIR -22 186 115 659 162 62 22 chr5 35263567 35263746 -164366404 + MER53 DNA DNA 1 186 -3 181 342 26 0 chr5 35263970 35264046 -164366104 + L3 LINE CR1 1219 1296 -281 26 50 0 0 chr5 35264181 35264221 -164365929 + AT_rich Low_complexity Low_complexity 1 40 0 28 86 0 0 chr5 35264315 35264385 -164365765 + AT_rich Low_complexity Low_complexity 1 70 0 719 307 194 2 chr5 35265253 35265670 -164364480 - L2 LINE L2 -3 3310 2814 481 343 70 43 chr5 35266368 35267001 -164363149 + L2 LINE L2 2656 3311 -2 2005 143 0 3 chr5 35267872 35268215 -164361935 + AluSx SINE Alu 7 348 0 297 324 10 0 chr5 35268732 35268834 -164361316 + L1ME LINE L1 5543 5645 -476 186 43 0 0 chr5 35270605 35270628 -164359522 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2605 296 102 41 chr5 35270672 35271819 -164358331 + L1MDb LINE L1 12 1228 -5181 2798 250 80 31 chr5 35271841 35273031 -164357119 + L1MDb LINE L1 1353 2613 -3793 238 258 166 65 chr5 35273186 35273403 -164356747 - Charlie8 DNA MER1_type -1015 1402 77 213 342 39 22 chr5 35274562 35274713 -164355437 + MIR3 SINE MIR 18 172 -36 27 0 0 0 chr5 35274920 35274947 -164355203 + AT_rich Low_complexity Low_complexity 1 27 0 24 67 0 0 chr5 35275067 35275112 -164355038 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr5 35275168 35275190 -164354960 + AT_rich Low_complexity Low_complexity 1 22 0 33 43 0 0 chr5 35276312 35276359 -164353791 + AT_rich Low_complexity Low_complexity 1 47 0 1928 135 56 36 chr5 35276378 35276734 -164353416 + THE1B LTR MaLR 1 363 -1 10582 119 11 4 chr5 35276735 35278304 -164351846 + THE1B-int LTR MaLR 1 1580 0 2086 128 47 36 chr5 35278304 35278664 -164351486 + THE1B LTR MaLR 1 364 0 237 100 0 0 chr5 35278876 35278916 -164351234 - L1MA3 LINE L1 -8 6297 6258 * 326 167 0 0 chr5 35278912 35278972 -164351178 + L1MA1 LINE L1 5952 6011 -291 242 299 142 16 chr5 35278988 35279115 -164351035 - MIR SINE MIR -64 198 56 25 83 0 0 chr5 35279311 35279371 -164350779 + AT_rich Low_complexity Low_complexity 1 60 0 24 0 0 0 chr5 35280162 35280186 -164349964 + AT_rich Low_complexity Low_complexity 1 24 0 1067 265 92 35 chr5 35280206 35280576 -164349574 - L1MC4 LINE L1 -1039 7003 6613 4453 79 11 2 chr5 35280593 35281216 -164348934 - L1PA7 LINE L1 0 6154 5526 5098 100 13 16 chr5 35281217 35281985 -164348165 + L1P LINE L1 1754 2519 -3627 2247 103 3 0 chr5 35281982 35282303 -164347847 + L1P LINE L1 3554 3875 -2271 * 27 62 0 0 chr5 35282994 35283042 -164347108 + AT_rich Low_complexity Low_complexity 1 48 0 32 43 0 0 chr5 35283540 35283586 -164346564 + AT_rich Low_complexity Low_complexity 1 46 0 628 138 62 8 chr5 35283586 35283716 -164346434 - L1MA8 LINE L1 -20 6271 6135 279 337 68 0 chr5 35285006 35285196 -164344954 + L1ME LINE L1 5488 5690 -431 1862 136 0 27 chr5 35285509 35285810 -164344340 + AluSx SINE Alu 3 295 -17 303 324 54 18 chr5 35286019 35286241 -164343909 + L1MC/D LINE L1 5315 5544 -2264 363 250 16 32 chr5 35286282 35286406 -164343744 + L1MEc LINE L1 35 156 -6240 890 257 85 20 chr5 35286439 35286793 -164343357 - MLT1C LTR MaLR -32 435 59 1053 217 110 82 chr5 35286800 35287164 -164342986 + MLT1A2 LTR MaLR 1 374 0 579 351 82 53 chr5 35287216 35287786 -164342364 + L1MEc LINE L1 216 802 -5594 365 256 57 11 chr5 35287812 35287988 -164342162 + L1MEc LINE L1 903 1086 -5310 1364 228 39 75 chr5 35287997 35288435 -164341715 + MSTB2 LTR MaLR 19 440 -17 664 299 96 47 chr5 35288449 35289234 -164340916 + L1MEc LINE L1 1084 1906 -4490 1112 167 99 30 chr5 35289245 35289369 -164340781 - L1M3 LINE L1 -484 5684 5570 1852 133 26 47 chr5 35289369 35289751 -164340399 - THE1C LTR MaLR -1 374 1 1112 167 99 30 chr5 35289751 35289859 -164340291 - L1M3 LINE L1 -598 5570 5436 772 230 11 17 chr5 35289865 35290039 -164340111 - FRAM SINE Alu -4 172 1 1181 175 41 12 chr5 35290044 35290385 -164339765 - L1M3 LINE L1 -743 5403 5087 1973 166 93 0 chr5 35290442 35290809 -164339341 + LTR42 LTR ERVL 71 471 -24 438 225 9 54 chr5 35290834 35290945 -164339205 + L1MA10 LINE L1 5675 5780 -388 324 188 0 0 chr5 35290945 35291014 -164339136 + (TG)n Simple_repeat Simple_repeat 2 70 0 242 213 0 0 chr5 35291019 35291066 -164339084 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 2300 179 60 23 chr5 35291066 35291597 -164338553 + L1MA10 LINE L1 5783 6333 -1 1268 246 105 30 chr5 35291599 35292300 -164337850 + L1MEc LINE L1 1970 2690 -3525 202 206 29 0 chr5 35293018 35293086 -164337064 + (TA)n Simple_repeat Simple_repeat 1 70 0 303 276 35 0 chr5 35293094 35293181 -164336969 + L1MC4 LINE L1 6614 6703 -1339 682 211 11 11 chr5 35293194 35293374 -164336776 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 256 236 22 22 chr5 35293392 35293481 -164336669 - L1MC4 LINE L1 -1340 6702 6614 256 271 0 21 chr5 35293492 35293588 -164336562 - L1MC4 LINE L1 -1340 6702 6609 743 329 104 31 chr5 35294780 35295260 -164334890 + L2 LINE L2 2397 2911 -403 5268 144 78 34 chr5 35295269 35295604 -164334546 - Tigger3b DNA MER2_type -1797 1231 912 203 61 30 0 chr5 35295604 35295637 -164334513 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 5268 144 78 34 chr5 35295637 35296377 -164333773 - Tigger3b DNA MER2_type -2116 912 109 288 353 41 0 chr5 35296460 35296582 -164333568 + L2 LINE L2 3182 3308 -5 475 70 76 29 chr5 35296822 35296993 -164333157 + (TA)n Simple_repeat Simple_repeat 1 179 0 2112 125 0 0 chr5 35296994 35297289 -164332861 - AluSx SINE Alu -16 296 2 3294 194 14 14 chr5 35297331 35298036 -164332114 - L1MB3 LINE L1 -3 6180 5476 1767 212 37 47 chr5 35298058 35298741 -164331409 - L1M3 LINE L1 -657 5762 5083 670 271 31 3 chr5 35298733 35299021 -164331129 - L1M3 LINE L1 -2772 3610 3315 * 815 140 173 0 chr5 35299021 35299171 -164330979 - AluSg/x SINE Alu 0 310 135 9256 193 80 28 chr5 35299182 35300359 -164329791 - L1M3 LINE L1 -3114 3268 2154 1527 205 6 22 chr5 35300359 35300676 -164329474 - AluJb SINE Alu 0 312 1 9256 193 80 28 chr5 35300676 35301157 -164328993 - L1M3 LINE L1 -4228 2154 1699 207 0 0 0 chr5 35301157 35301180 -164328970 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 9256 193 80 28 chr5 35301180 35302319 -164327831 - L1M3 LINE L1 -4683 1699 320 2130 105 0 0 chr5 35302976 35303253 -164326897 + AluSx SINE Alu 27 303 -9 234 211 53 0 chr5 35305239 35305315 -164324835 + (TTA)n Simple_repeat Simple_repeat 3 82 0 1432 238 85 21 chr5 35305882 35306307 -164323843 + MLT1C LTR MaLR 3 454 -13 1922 103 0 4 chr5 35306706 35306967 -164323183 + AluSg SINE Alu 39 298 -12 2495 113 3 3 chr5 35308222 35308586 -164321564 + THE1B LTR MaLR 1 364 0 184 171 0 24 chr5 35308962 35309003 -164321147 + L2 LINE L2 3270 3309 -4 24 53 0 0 chr5 35310145 35310183 -164319967 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr5 35310217 35310239 -164319911 + (TA)n Simple_repeat Simple_repeat 2 23 0 240 211 0 18 chr5 35311189 35311246 -164318904 + MER58 DNA MER1_type 53 108 -2312 818 249 129 11 chr5 35311558 35311931 -164318219 + L1MC/D LINE L1 4586 5002 -1144 4643 117 11 4 chr5 35311934 35312636 -164317514 + L1MA1 LINE L1 5408 6114 -188 419 169 13 0 chr5 35312636 35312713 -164317437 - MADE1 DNA Mariner 0 80 3 1155 130 5 0 chr5 35312714 35312898 -164317252 + L1MA1 LINE L1 6112 6296 -6 391 254 70 5 chr5 35312916 35313117 -164317033 + L1MC/D LINE L1 4993 5206 -940 611 201 60 0 chr5 35313121 35313305 -164316845 + L1MC/D LINE L1 5256 5450 -2545 421 86 0 0 chr5 35364005 35364063 -164266087 + THE1C LTR MaLR 2 59 -316 2059 140 56 8 chr5 35364074 35364431 -164265719 + THE1C LTR MaLR 1 374 -1 1495 176 31 0 chr5 35364702 35364992 -164265158 + L1MA5A LINE L1 4685 4983 -1163 675 128 9 0 chr5 35365008 35365117 -164265033 - L1M1 LINE L1 -873 5430 5321 5958 139 38 44 chr5 35365456 35366772 -164263378 + L1MA5A LINE L1 4960 6291 -6 26 50 0 0 chr5 35366772 35366812 -164263338 + AT_rich Low_complexity Low_complexity 1 40 0 28 48 0 0 chr5 35366903 35366945 -164263205 + AT_rich Low_complexity Low_complexity 1 42 0 290 337 10 31 chr5 35368879 35368977 -164261173 + MIR SINE MIR 6 101 -161 4532 85 6 14 chr5 35369489 35370134 -164260016 + L1PA10 LINE L1 5528 6167 -1 196 355 0 0 chr5 35370785 35370847 -164259303 + MIR SINE MIR 49 110 -152 2134 209 0 7 chr5 35370923 35371329 -164258821 - ERVL LTR ERVL -444 5320 4918 3970 244 45 10 chr5 35371331 35372294 -164257856 - ERVL LTR ERVL -953 4811 3816 1749 45 0 0 chr5 35372394 35372595 -164257555 + LTR5 LTR ERVK 769 969 0 8237 273 46 17 chr5 35372595 35375110 -164255040 - ERVL LTR ERVL -2592 3172 508 2173 210 72 98 chr5 35375436 35376141 -164254009 - LTR8A LTR ERV1 -7 720 34 684 183 8 8 chr5 35376394 35376514 -164253636 + FLAM_A SINE Alu 1 120 -13 2352 91 0 3 chr5 35377064 35377371 -164252779 + AluSq SINE Alu 1 306 -7 1623 186 3 72 chr5 35377459 35377835 -164252315 - MLT1B LTR MaLR 0 390 41 216 0 0 0 chr5 35378344 35378368 -164251782 + (AAATG)n Simple_repeat Simple_repeat 3 26 0 186 43 0 0 chr5 35378680 35378703 -164251447 + (TA)n Simple_repeat Simple_repeat 2 24 0 180 77 0 0 chr5 35380171 35380197 -164249953 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 345 110 0 200 chr5 35380255 35380355 -164249795 - MADE1 DNA Mariner 0 80 1 1935 125 28 0 chr5 35381742 35382031 -164248119 + AluSx SINE Alu 1 297 -15 207 100 0 0 chr5 35383403 35383433 -164246717 + (T)n Simple_repeat Simple_repeat 1 30 0 557 224 31 25 chr5 35385866 35386027 -164244123 - L1MA9 LINE L1 -1 6311 6150 * 1169 205 37 16 chr5 35386023 35386345 -164243805 - L1 LINE L1 -1441 4705 4377 1877 174 126 5 chr5 35386347 35386727 -164243423 - MSTA LTR MaLR -2 426 1 8189 200 42 2 chr5 35386735 35388322 -164241828 - MSTA-int LTR MaLR -1 1650 1 1405 146 91 8 chr5 35388322 35388576 -164241574 - MSTA LTR MaLR 0 428 154 1803 170 159 5 chr5 35388576 35388947 -164241203 - MSTA LTR MaLR 0 428 1 957 286 8 0 chr5 35390499 35390747 -164239403 + HERV16 LTR ERVL 1058 1307 -3689 1618 174 19 0 chr5 35390873 35391138 -164239012 + MSTA LTR MaLR 159 428 0 1819 336 47 24 chr5 35391427 35391794 -164238356 + HERV16 LTR ERVL 1665 2022 -2974 2146 188 39 12 chr5 35391794 35392209 -164237941 + MSTB LTR MaLR 1 426 0 1819 336 47 24 chr5 35392209 35392702 -164237448 + HERV16 LTR ERVL 2022 2544 -2452 264 119 51 0 chr5 35392783 35392842 -164237308 + (TA)n Simple_repeat Simple_repeat 2 63 0 414 254 9 26 chr5 35392842 35392956 -164237194 + HERV16 LTR ERVL 2607 2718 -2278 969 236 20 18 chr5 35393104 35393371 -164236779 - MER74C LTR ERVL -196 362 15 757 329 105 51 chr5 35393435 35394282 -164235868 + HERV16 LTR ERVL 3829 4721 -933 263 333 59 52 chr5 35394529 35394935 -164235215 + HERV16 LTR ERVL 4969 5377 -387 469 361 57 25 chr5 35395054 35395492 -164234658 + LTR16B LTR ERVL 1 452 -12 210 346 38 30 chr5 35397437 35397570 -164232580 - L2 LINE L2 -24 3289 3156 25 0 0 0 chr5 35398948 35398973 -164231177 + AT_rich Low_complexity Low_complexity 1 25 0 317 62 21 0 chr5 35399039 35399087 -164231063 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 5095 140 35 6 chr5 35399533 35400611 -164229539 + L1PA16 LINE L1 5063 6166 0 1938 132 13 3 chr5 35401013 35401323 -164228827 + HSMAR2 DNA Mariner 2 314 -988 2516 71 0 0 chr5 35401323 35401634 -164228516 + AluY SINE Alu 1 311 0 3414 190 29 1 chr5 35401641 35402308 -164227842 + HSMAR2 DNA Mariner 617 1301 -1 21 0 0 0 chr5 35402469 35402490 -164227660 + AT_rich Low_complexity Low_complexity 1 21 0 25 75 0 0 chr5 35403548 35403601 -164226549 + AT_rich Low_complexity Low_complexity 1 53 0 509 333 156 20 chr5 35404350 35404792 -164225358 - L2 LINE L2 0 3313 2812 3236 78 2 7 chr5 35404797 35405247 -164224903 - LTR7 LTR ERV1 -2 448 1 2513 80 49 13 chr5 35405247 35405635 -164224515 - HERVH LTR ERV1 0 7713 7312 1352 139 19 0 chr5 35405625 35405841 -164224309 - HERVH LTR ERV1 -1894 5819 5600 * 4165 154 1 1 chr5 35405842 35406504 -164223646 - HERVH LTR ERV1 -2564 5149 4488 3264 122 6 6 chr5 35406507 35407008 -164223142 - HERVH LTR ERV1 -3721 3992 3492 946 133 7 0 chr5 35406998 35407148 -164223002 - HERVH LTR ERV1 -4423 3290 3140 * 19998 98 16 10 chr5 35407127 35410105 -164220045 - HERVH LTR ERV1 -4718 2995 1 3208 74 11 7 chr5 35410107 35410553 -164219597 - LTR7 LTR ERV1 -2 448 1 301 337 57 34 chr5 35410587 35410762 -164219388 - L2 LINE L2 -534 2780 2602 293 234 16 16 chr5 35411102 35411166 -164218984 + L2 LINE L2 2985 3048 -224 1394 212 79 6 chr5 35411455 35411795 -164218355 - MLT1A1 LTR MaLR 0 365 1 27 0 0 0 chr5 35412061 35412088 -164218062 + AT_rich Low_complexity Low_complexity 1 27 0 1663 259 56 51 chr5 35413557 35414199 -164215951 - L1ME1 LINE L1 -5 6173 5526 1440 286 58 68 chr5 35414224 35415259 -164214891 - L1M2 LINE L1 -4292 2666 1229 21 0 0 0 chr5 35415542 35415563 -164214587 + AT_rich Low_complexity Low_complexity 1 21 0 414 152 15 0 chr5 35416589 35416655 -164213495 + AluS SINE Alu 3 69 -234 7169 50 0 0 chr5 35416758 35417587 -164212563 - LTR5 LTR ERVK -140 829 1 1079 278 75 0 chr5 35417587 35417882 -164212268 + ERVL LTR ERVL 3167 3483 -2281 1014 201 12 136 chr5 35418055 35418393 -164211757 + MLT1B LTR MaLR 91 386 -4 406 295 43 56 chr5 35419343 35419577 -164210573 + HAL1 LINE L1 817 1047 -1460 394 270 96 108 chr5 35419783 35420127 -164210023 - L2 LINE L2 -1 3312 2973 440 330 53 23 chr5 35420148 35420412 -164209738 + HAL1 LINE L1 1265 1536 -971 1381 207 21 18 chr5 35420521 35420806 -164209344 - AluJo SINE Alu -26 286 1 546 270 124 22 chr5 35420991 35421169 -164208981 + MIR SINE MIR 30 225 -37 328 308 8 8 chr5 35421198 35421318 -164208832 + CT-rich Low_complexity Low_complexity 5 124 0 237 197 16 16 chr5 35421823 35421884 -164208266 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 22 35 0 0 chr5 35422527 35422556 -164207594 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 35423026 35423048 -164207102 + AT_rich Low_complexity Low_complexity 1 22 0 458 323 45 0 chr5 35423453 35423586 -164206564 + MER5B DNA MER1_type 40 178 0 250 288 15 0 chr5 35423910 35423976 -164206174 + MER5B DNA MER1_type 2 68 -110 337 303 46 72 chr5 35424241 35424436 -164205714 - HAL1b LINE L1 -876 472 283 1640 178 4 4 chr5 35424459 35424734 -164205416 - AluJo SINE Alu -37 275 1 320 299 56 53 chr5 35424878 35425162 -164204988 - L1M4c LINE L1 -5172 1212 928 1349 211 131 21 chr5 35425496 35425917 -164204233 - MLT1C LTR MaLR 0 467 1 27 0 0 0 chr5 35425977 35426004 -164204146 + AT_rich Low_complexity Low_complexity 1 27 0 1195 333 76 23 chr5 35426006 35426131 -164204019 - L2 LINE L2 -81 3232 3115 216 67 0 0 chr5 35426131 35426161 -164203989 + (TA)n Simple_repeat Simple_repeat 2 31 0 1195 333 76 23 chr5 35426161 35426914 -164203236 - L2 LINE L2 -198 3115 2311 196 316 145 0 chr5 35427027 35427103 -164203047 - MER5A DNA MER1_type 0 189 103 329 93 0 0 chr5 35427608 35427651 -164202499 - THE1A LTR MaLR -1 354 312 9953 117 5 3 chr5 35427774 35429203 -164200947 - THE1B-int LTR MaLR -147 1433 3 2082 118 30 33 chr5 35429205 35429570 -164200580 - THE1B LTR MaLR 0 364 1 243 299 84 9 chr5 35431391 35431498 -164198652 + MIR SINE MIR 111 225 -37 262 299 116 60 chr5 35431650 35431934 -164198216 - MLT1K LTR MaLR -121 467 168 216 111 0 0 chr5 35432054 35432090 -164198060 + (TCTA)n Simple_repeat Simple_repeat 2 37 0 29 0 0 0 chr5 35433056 35433085 -164197065 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 35433593 35433621 -164196529 + AT_rich Low_complexity Low_complexity 1 28 0 1837 161 0 0 chr5 35433870 35434166 -164195984 - AluJb SINE Alu 0 308 13 286 167 0 19 chr5 35434203 35434257 -164195893 + MIR SINE MIR 172 224 -38 1793 137 48 3 chr5 35434538 35434830 -164195320 + AluSx SINE Alu 1 305 -7 1154 271 84 25 chr5 35435330 35435736 -164194414 - LTR40b LTR ERVL 0 462 33 357 298 68 0 chr5 35435951 35436112 -164194038 + HAL1 LINE L1 2240 2411 -96 247 305 0 11 chr5 35436168 35436263 -164193887 + (TATATG)n Simple_repeat Simple_repeat 6 99 0 638 234 115 8 chr5 35438849 35439101 -164191049 - MER33 DNA MER1_type -17 307 29 5620 23 3 0 chr5 35439101 35439760 -164190390 + L1PA4 LINE L1 5495 6155 0 21 0 0 0 chr5 35440020 35440041 -164190109 + AT_rich Low_complexity Low_complexity 1 21 0 315 293 163 59 chr5 35440384 35440623 -164189527 + L2 LINE L2 2234 2497 -817 1834 166 125 13 chr5 35441063 35441448 -164188702 - MSTA LTR MaLR 0 428 1 7581 223 62 10 chr5 35441448 35442948 -164187202 - MSTA-int LTR MaLR 0 1580 3 1784 161 130 18 chr5 35442950 35443335 -164186815 - MSTA LTR MaLR 0 428 1 252 276 97 21 chr5 35443943 35444088 -164186062 - MER67D LTR ERV1 0 514 359 1018 242 58 8 chr5 35444111 35444371 -164185779 - MER67C LTR ERV1 -325 385 113 428 228 72 84 chr5 35444373 35444636 -164185514 + MER4C LTR ERV1 1 260 -205 1197 232 101 41 chr5 35444668 35445277 -164184873 - LTR48B LTR ERV1 0 707 2 945 218 61 75 chr5 35445518 35445798 -164184352 + AluJo SINE Alu 5 280 -32 252 0 0 0 chr5 35445801 35445829 -164184321 + (CA)n Simple_repeat Simple_repeat 1 28 0 263 368 111 14 chr5 35445936 35446080 -164184070 + L2 LINE L2 3114 3271 -1 231 61 0 0 chr5 35446436 35446469 -164183681 + (GA)n Simple_repeat Simple_repeat 2 34 0 1879 119 7 53 chr5 35446479 35446781 -164183369 - AluSx SINE Alu -24 288 1 244 364 37 21 chr5 35446973 35447160 -164182990 - L2 LINE L2 -823 2491 2302 25 0 0 0 chr5 35447881 35447906 -164182244 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 35448611 35448633 -164181517 + AT_rich Low_complexity Low_complexity 1 22 0 1639 179 7 0 chr5 35448739 35449013 -164181137 + AluSx SINE Alu 7 282 -30 755 250 11 17 chr5 35450450 35450626 -164179524 + Charlie1a DNA MER1_type 3 177 -1278 2106 252 42 20 chr5 35451038 35451678 -164178472 + Charlie1a DNA MER1_type 373 1026 -429 239 316 221 9 chr5 35451981 35452047 -164178103 - L2 LINE L2 -171 3142 3091 1470 77 10 0 chr5 35452047 35452243 -164177907 - AluSp SINE Alu -1 312 115 239 316 221 9 chr5 35452243 35452466 -164177684 - L2 LINE L2 -222 3091 2793 1526 214 138 22 chr5 35452491 35452860 -164177290 + MSTB LTR MaLR 1 412 -14 181 370 160 20 chr5 35452887 35453087 -164177063 + MIR SINE MIR 14 241 -21 435 336 51 23 chr5 35453180 35453397 -164176753 - L2 LINE L2 -570 2744 2522 438 258 159 7 chr5 35453843 35453994 -164176156 - MER5A DNA MER1_type -5 184 11 1734 129 59 18 chr5 35454925 35455211 -164174939 + AluSx SINE Alu 1 298 -14 1315 88 0 0 chr5 35455354 35455525 -164174625 - AluY SINE Alu -11 300 130 18886 170 44 18 chr5 35455818 35458333 -164171817 - L1MA3 LINE L1 0 7724 5276 1936 151 23 47 chr5 35458333 35458717 -164171433 + THE1C LTR MaLR 1 375 0 18886 170 44 18 chr5 35458717 35458812 -164171338 - L1MA3 LINE L1 -2448 5276 5185 270 0 0 0 chr5 35458812 35458842 -164171308 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 18886 170 44 18 chr5 35458842 35463655 -164166495 - L1MA3 LINE L1 -2539 5185 91 300 27 0 0 chr5 35463655 35463692 -164166458 + (TG)n Simple_repeat Simple_repeat 2 38 0 18886 170 44 18 chr5 35463692 35463769 -164166381 - L1MA3 LINE L1 -7633 91 17 214 245 0 0 chr5 35463898 35463947 -164166203 + (CACCAT)n Simple_repeat Simple_repeat 5 53 0 5577 258 65 44 chr5 35464716 35467668 -164162482 + L1MD2 LINE L1 2608 5637 -722 1908 203 29 37 chr5 35467668 35468156 -164161994 - MER66B LTR ERV1 -2 484 1 5577 258 65 44 chr5 35468156 35468877 -164161273 + L1MD2 LINE L1 5637 6341 -18 21 0 0 0 chr5 35468940 35468961 -164161189 + AT_rich Low_complexity Low_complexity 1 21 0 2143 120 0 10 chr5 35468973 35469281 -164160869 + AluSx SINE Alu 1 305 -7 269 250 15 0 chr5 35471324 35471392 -164158758 + (TA)n Simple_repeat Simple_repeat 1 69 0 23 0 0 0 chr5 35471507 35471530 -164158620 + AT_rich Low_complexity Low_complexity 1 23 0 256 323 68 12 chr5 35471583 35471744 -164158406 + L1MEc LINE L1 39 208 -6188 264 208 26 52 chr5 35471792 35471869 -164158281 + MER63 DNA MER1_type 660 734 -326 400 320 102 54 chr5 35471950 35472945 -164157205 + L1MEc LINE L1 186 1227 -5169 579 207 56 22 chr5 35473486 35473665 -164156485 + MER53 DNA DNA 2 186 -3 1756 146 0 41 chr5 35474220 35474549 -164155601 + AluSx SINE Alu 1 317 0 26 0 0 0 chr5 35474841 35474867 -164155283 + AT_rich Low_complexity Low_complexity 1 26 0 1210 113 0 0 chr5 35475168 35475328 -164154822 + AluSg/x SINE Alu 134 293 -19 2010 137 15 66 chr5 35475500 35475895 -164154255 + THE1C LTR MaLR 1 375 0 4090 115 2 5 chr5 35475897 35476463 -164153687 + THE1C-int LTR MaLR 1017 1580 0 2282 128 16 19 chr5 35476463 35476839 -164153311 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr5 35477565 35477588 -164152562 + AT_rich Low_complexity Low_complexity 1 23 0 380 286 167 9 chr5 35479451 35479877 -164150273 - L1M4 LINE L1 -1372 4774 4282 267 133 0 0 chr5 35480026 35480071 -164150079 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 32 26 0 0 chr5 35480095 35480134 -164150016 + AT_rich Low_complexity Low_complexity 1 39 0 324 316 36 12 chr5 35480360 35480528 -164149622 - L1M4 LINE L1 -2336 3810 3639 282 29 0 0 chr5 35480583 35480618 -164149532 + (T)n Simple_repeat Simple_repeat 1 35 0 358 316 36 27 chr5 35481509 35481838 -164148312 - L1MEc LINE L1 -5019 1377 1046 901 129 0 0 chr5 35481909 35482041 -164148109 - MER41A LTR ERV1 -422 132 1 738 131 54 0 chr5 35483610 35483740 -164146410 + MER41B LTR ERV1 498 634 -1 1390 65 0 0 chr5 35484304 35484473 -164145677 + AluY SINE Alu 133 301 -10 35 0 0 0 chr5 35484965 35485000 -164145150 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 35485208 35485236 -164144914 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 35485999 35486034 -164144116 + AT_rich Low_complexity Low_complexity 1 35 0 2347 78 0 7 chr5 35486077 35486384 -164143766 - AluY SINE Alu -6 305 1 21 0 0 0 chr5 35486724 35486745 -164143405 + AT_rich Low_complexity Low_complexity 1 21 0 527 213 149 27 chr5 35487249 35487437 -164142713 + L1ME3A LINE L1 5889 6099 -71 23 33 0 0 chr5 35487471 35487501 -164142649 + AT_rich Low_complexity Low_complexity 1 30 0 343 310 75 57 chr5 35487505 35487837 -164142313 + L1M4 LINE L1 5054 5391 -755 880 265 49 12 chr5 35488082 35488327 -164141823 - MLT1E3 LTR MaLR -370 254 1 1222 205 46 49 chr5 35488573 35488943 -164141207 + MLT1A2 LTR MaLR 4 372 -2 2388 69 0 0 chr5 35491259 35491550 -164138600 - AluSg SINE Alu -9 301 11 2182 72 0 31 chr5 35491724 35492014 -164138136 - AluY SINE Alu -6 305 25 1907 131 109 3 chr5 35492153 35492482 -164137668 - THE1B LTR MaLR 0 364 1 6095 104 37 10 chr5 35492503 35493432 -164136718 - LTR13 LTR ERVK 0 954 1 198 143 0 0 chr5 35493512 35493547 -164136603 + (TG)n Simple_repeat Simple_repeat 2 36 0 958 180 77 109 chr5 35494941 35495318 -164134832 - MLT1A1 LTR MaLR 0 365 1 2224 93 10 0 chr5 35495603 35495905 -164134245 + AluSq SINE Alu 1 305 -8 292 318 65 56 chr5 35496844 35497058 -164133092 - MIR SINE MIR -21 241 26 21 57 0 0 chr5 35497926 35497961 -164132189 + AT_rich Low_complexity Low_complexity 1 35 0 270 0 0 0 chr5 35498514 35498544 -164131606 + (T)n Simple_repeat Simple_repeat 1 30 0 1336 160 4 4 chr5 35498550 35498781 -164131369 - AluSx SINE Alu -81 231 1 42 65 0 0 chr5 35499081 35499158 -164130992 + AT_rich Low_complexity Low_complexity 1 77 0 298 239 124 73 chr5 35499181 35499371 -164130779 - HAL1 LINE L1 -4 2503 2324 2150 129 3 3 chr5 35499371 35499682 -164130468 - AluSx SINE Alu 0 312 2 298 239 124 73 chr5 35499682 35499943 -164130207 - HAL1 LINE L1 -183 2324 2029 722 285 97 24 chr5 35500219 35500685 -164129465 - HAL1 LINE L1 -895 1612 1113 291 71 0 0 chr5 35500972 35501014 -164129136 + (TG)n Simple_repeat Simple_repeat 1 42 0 324 304 7 36 chr5 35501502 35501640 -164128510 - LTR33 LTR ERVL 0 521 388 505 148 25 0 chr5 35501649 35501730 -164128420 - MSTA LTR MaLR 0 428 346 6139 73 28 0 chr5 35501876 35502699 -164127451 - L1PA7 LINE L1 -5 6149 5304 6351 83 3 2 chr5 35502701 35503600 -164126550 + L1PA7 LINE L1 4382 5281 -865 1793 168 48 0 chr5 35504081 35504414 -164125736 - MSTA LTR MaLR -79 349 1 880 271 187 7 chr5 35504858 35505371 -164124779 + MLT1E1 LTR MaLR 1 654 0 390 127 0 42 chr5 35505371 35505442 -164124708 + L1PA15 LINE L1 4690 4757 -1389 5624 128 11 4 chr5 35505442 35506568 -164123582 + L1PA15 LINE L1 5032 6164 -1 4972 142 54 5 chr5 35506786 35507674 -164122476 - L1MA6 LINE L1 0 6300 5369 518 204 0 0 chr5 35507669 35507772 -164122378 - L1MA6 LINE L1 -1069 5077 4975 * 195 42 0 0 chr5 35508692 35508716 -164121434 + (TC)n Simple_repeat Simple_repeat 2 25 0 609 299 102 31 chr5 35508734 35509276 -164120874 - L1MC4 LINE L1 -166 7876 7297 479 168 148 0 chr5 35509285 35509386 -164120764 + L1PA16 LINE L1 6049 6164 -2 364 156 15 96 chr5 35509689 35509824 -164120326 + L1M4 LINE L1 3834 3957 -2189 322 277 58 7 chr5 35510879 35511016 -164119134 - L1ME3 LINE L1 -1 6161 6018 427 317 89 47 chr5 35511041 35512016 -164118134 - L1M4 LINE L1 -1834 4312 3297 31 0 0 0 chr5 35512635 35512666 -164117484 + AT_rich Low_complexity Low_complexity 1 31 0 757 188 7 7 chr5 35514187 35514331 -164115819 - Tigger1 DNA MER2_type 0 2418 2275 12259 149 44 30 chr5 35514855 35516105 -164114045 - Tigger1 DNA MER2_type -139 2279 983 2158 133 16 34 chr5 35516105 35516487 -164113663 + THE1C LTR MaLR 1 375 0 12259 149 44 30 chr5 35516487 35517484 -164112666 - Tigger1 DNA MER2_type -1435 983 1 2378 182 25 6 chr5 35518946 35519434 -164110716 - L1MB3 LINE L1 -2 6181 5685 1466 253 184 8 chr5 35520509 35521031 -164109119 - MER90 LTR ERV1 0 614 1 2254 80 0 3 chr5 35521720 35522022 -164108128 - L1PA13 LINE L1 -4 6159 5859 707 256 0 0 chr5 35522420 35522576 -164107574 + MER6B DNA MER2_type 1 156 -54 361 348 118 25 chr5 35523340 35523501 -164106649 + L2 LINE L2 223 398 -2916 444 296 135 32 chr5 35523883 35524356 -164105794 + L1M4 LINE L1 4166 4687 -1459 33 43 0 0 chr5 35524386 35524433 -164105717 + AT_rich Low_complexity Low_complexity 1 47 0 389 358 5 27 chr5 35524661 35524848 -164105302 - MIR SINE MIR -50 212 30 288 0 0 0 chr5 35524967 35524999 -164105151 + (CA)n Simple_repeat Simple_repeat 2 33 0 195 324 57 75 chr5 35525053 35525371 -164104779 - L2 LINE L2 -1008 2306 1995 907 255 37 69 chr5 35525391 35525768 -164104382 + MLT1A1 LTR MaLR 1 365 0 2396 83 0 13 chr5 35525780 35526092 -164104058 - AluY SINE Alu -3 308 1 677 211 57 14 chr5 35526183 35526389 -164103761 - L1PA16 LINE L1 -1 6162 5928 2381 185 7 16 chr5 35526790 35527222 -164102928 - MER44D DNA MER2_type 0 605 123 5869 74 2 26 chr5 35527577 35528376 -164101774 - LTR17 LTR ERV1 0 780 1 224 365 47 0 chr5 35529410 35529495 -164100655 - L2 LINE L2 -9 3263 3175 2505 198 73 38 chr5 35529737 35529788 -164100362 + MER67C LTR ERV1 9 57 -653 1699 147 3 69 chr5 35529788 35529884 -164100266 + AluSx SINE Alu 1 102 -210 1987 119 46 13 chr5 35529884 35530187 -164099963 + AluSp SINE Alu 1 313 0 1699 147 3 69 chr5 35530187 35530424 -164099726 + AluSx SINE Alu 102 312 0 2505 198 73 38 chr5 35530424 35531002 -164099148 + MER67C LTR ERV1 57 660 -50 2077 138 6 6 chr5 35531075 35531387 -164098763 - AluSx SINE Alu 0 312 1 2299 87 0 7 chr5 35532068 35532366 -164097784 - AluSc SINE Alu -13 296 1 253 292 34 34 chr5 35532473 35532562 -164097588 + L2 LINE L2 2211 2299 -1015 1803 168 0 30 chr5 35533742 35534040 -164096110 - AluJo SINE Alu -23 289 1 250 238 20 48 chr5 35534056 35534203 -164095947 + (CATATA)n Simple_repeat Simple_repeat 4 146 0 419 309 52 60 chr5 35534781 35535147 -164095003 - L2 LINE L2 0 3313 2951 2920 151 32 2 chr5 35536199 35536701 -164093449 - Tigger3(Golem) DNA MER2_type 0 3029 2513 449 208 208 0 chr5 35536728 35536853 -164093297 - L1MA5A LINE L1 -20 6277 6127 777 299 0 0 chr5 35536870 35537071 -164093079 - HERV17 LTR ERV1 -1067 7559 7359 10987 233 18 21 chr5 35537079 35539436 -164090714 - HERV17 LTR ERV1 -4897 3729 789 1548 111 5 0 chr5 35539436 35539643 -164090507 - AluY SINE Alu -19 292 85 10987 233 18 21 chr5 35539643 35540430 -164089720 - HERV17 LTR ERV1 -7837 789 1 732 206 9 93 chr5 35540455 35540712 -164089438 - LTR12 LTR ERV1 -98 682 238 39891 83 9 0 chr5 35540982 35546136 -164084014 + HERVL LTR ERVL 2 5198 -456 23 78 0 0 chr5 35546180 35546231 -164083919 + AT_rich Low_complexity Low_complexity 1 51 0 4498 164 40 4 chr5 35548338 35549135 -164081015 - LTR1B LTR ERV1 0 826 1 23 33 0 0 chr5 35550534 35550564 -164079586 + AT_rich Low_complexity Low_complexity 1 30 0 342 312 26 7 chr5 35550774 35550928 -164079222 + (TATATG)n Simple_repeat Simple_repeat 4 160 0 281 199 29 29 chr5 35550934 35551070 -164079080 + (CATATA)n Simple_repeat Simple_repeat 5 140 0 24 67 0 0 chr5 35551667 35551712 -164078438 + AT_rich Low_complexity Low_complexity 1 45 0 2193 131 33 28 chr5 35551811 35552201 -164077949 - Tigger2 DNA MER2_type -48 2670 2279 297 237 0 0 chr5 35552207 35552266 -164077884 - Tigger2 DNA MER2_type -2659 59 1 22 70 0 0 chr5 35552712 35552755 -164077395 + AT_rich Low_complexity Low_complexity 1 43 0 1826 184 46 57 chr5 35553009 35553284 -164076866 + Tigger2a DNA MER2_type 1 271 -2437 459 0 0 0 chr5 35553284 35553335 -164076815 + (TA)n Simple_repeat Simple_repeat 1 51 0 1826 184 46 57 chr5 35553335 35553498 -164076652 + Tigger2a DNA MER2_type 271 434 0 267 173 0 0 chr5 35553627 35553679 -164076471 + (TG)n Simple_repeat Simple_repeat 1 52 0 1841 161 5 63 chr5 35554526 35554924 -164075226 + THE1C LTR MaLR 1 375 0 359 273 105 0 chr5 35555385 35555528 -164074622 - MIR SINE MIR -8 254 97 * 882 301 65 90 chr5 35555525 35556292 -164073858 + L2 LINE L2 1820 2567 -747 21 36 0 0 chr5 35556566 35556594 -164073556 + AT_rich Low_complexity Low_complexity 1 28 0 220 139 23 0 chr5 35556910 35556953 -164073197 + (TA)n Simple_repeat Simple_repeat 2 45 0 284 111 49 0 chr5 35557057 35557138 -164073012 + (TA)n Simple_repeat Simple_repeat 2 86 0 260 296 148 0 chr5 35557640 35557748 -164072402 + MIR SINE MIR 89 212 -50 2891 16 0 0 chr5 35559113 35559431 -164070719 + AluYb8 SINE Alu 1 318 0 253 347 142 40 chr5 35560112 35560738 -164069412 - L2 LINE L2 -851 2463 1774 1777 167 0 34 chr5 35560739 35561062 -164069088 + AluJo SINE Alu 1 312 0 428 307 131 49 chr5 35561858 35562285 -164067865 - HAL1 LINE L1 -413 2094 1633 459 0 0 0 chr5 35562354 35562405 -164067745 + (TG)n Simple_repeat Simple_repeat 1 51 0 536 282 101 32 chr5 35562405 35562682 -164067468 - L1M4 LINE L1 -1289 4857 4562 284 274 54 65 chr5 35562737 35562905 -164067245 + MLT1E2-int LTR MaLR 1023 1188 -183 22 56 0 0 chr5 35563317 35563353 -164066797 + AT_rich Low_complexity Low_complexity 1 36 0 2451 159 31 5 chr5 35563394 35563815 -164066335 - MSTB1 LTR MaLR 0 432 1 224 329 29 0 chr5 35565413 35565483 -164064667 + L2 LINE L2 3194 3265 -7 182 289 0 0 chr5 35565509 35565561 -164064589 - MIR SINE MIR -126 136 85 834 259 200 77 chr5 35566142 35566698 -164063452 + MLT1E2 LTR MaLR 1 624 0 22 56 0 0 chr5 35567196 35567232 -164062918 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 35568427 35568456 -164061694 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 35568952 35568987 -164061163 + AT_rich Low_complexity Low_complexity 1 35 0 867 190 76 14 chr5 35569314 35569525 -164060625 + AluJo SINE Alu 9 232 -80 1345 210 31 11 chr5 35569938 35570224 -164059926 + AluJo SINE Alu 9 300 -12 1739 235 3 6 chr5 35570307 35570673 -164059477 - MLT1A1 LTR MaLR 0 365 1 1663 195 3 3 chr5 35571315 35571607 -164058543 - AluJb SINE Alu -20 292 1 33 25 0 0 chr5 35572465 35572505 -164057645 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr5 35572725 35572746 -164057404 + AT_rich Low_complexity Low_complexity 1 21 0 311 371 35 0 chr5 35573525 35573695 -164056455 - MIR SINE MIR -38 224 49 22 56 0 0 chr5 35573841 35573877 -164056273 + AT_rich Low_complexity Low_complexity 1 36 0 1298 198 16 95 chr5 35574147 35574577 -164055573 - MSTD LTR MaLR 0 396 1 30 59 0 0 chr5 35575149 35575200 -164054950 + AT_rich Low_complexity Low_complexity 1 51 0 391 314 61 53 chr5 35575324 35575490 -164054660 - L1 LINE L1 -1602 4544 4381 2001 145 7 0 chr5 35575490 35575794 -164054356 - AluSx SINE Alu -6 306 1 391 314 61 53 chr5 35575794 35576060 -164054090 - L1 LINE L1 -1765 4381 4111 2568 128 11 30 chr5 35577177 35577613 -164052537 - LTR22A LTR ERVK -30 428 1 8650 109 2 1 chr5 35577613 35579945 -164050205 - HERVK22 LTR ERVK 0 6837 2248 4869 157 1 7 chr5 35579937 35580708 -164049442 - HERVK22 LTR ERVK -5856 981 215 * 750 70 0 0 chr5 35580711 35580811 -164049339 - AluY SINE Alu -211 100 1 211 167 0 33 chr5 35581215 35581275 -164048875 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 238 339 32 38 chr5 35581275 35581588 -164048562 + HAL1 LINE L1 1341 1651 -856 203 204 19 0 chr5 35582132 35582186 -164047964 + (TA)n Simple_repeat Simple_repeat 2 56 0 286 145 14 14 chr5 35582208 35582277 -164047873 + (TA)n Simple_repeat Simple_repeat 1 69 0 21 0 0 0 chr5 35582765 35582786 -164047364 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 35583551 35583589 -164046561 + AT_rich Low_complexity Low_complexity 1 38 0 274 57 0 0 chr5 35584237 35584272 -164045878 + MLT1B LTR MaLR 23 57 -333 210 302 216 22 chr5 35584417 35584639 -164045511 + L3 LINE CR1 946 1210 -367 1112 171 39 73 chr5 35586800 35587034 -164043116 - AluJo SINE Alu -66 246 21 2101 134 14 38 chr5 35587034 35587399 -164042751 + LTR18A LTR ERVL 2 357 0 2017 185 36 32 chr5 35587435 35587873 -164042277 + HERVL18 LTR ERVL 95 534 -5513 * 2064 193 12 13 chr5 35587842 35588441 -164041709 + HERVL18 LTR ERVL 1149 1810 -4237 1261 153 65 2 chr5 35588440 35588698 -164041452 + HERVL18 LTR ERVL 2119 2450 -3597 * 2080 203 3 3 chr5 35588699 35589068 -164041082 + HERVL18 LTR ERVL 2720 3088 -2959 1283 153 0 0 chr5 35589064 35589247 -164040903 + HERVL18 LTR ERVL 2952 3134 -2913 * 201 236 0 18 chr5 35589603 35589658 -164040492 + GA-rich Low_complexity Low_complexity 1 54 0 * 209 167 42 21 chr5 35589621 35589669 -164040481 + (CAGAGA)n Simple_repeat Simple_repeat 2 50 0 1210 243 48 88 chr5 35589795 35590321 -164039829 - MLT1D LTR MaLR 0 505 1 1899 269 38 28 chr5 35590677 35591416 -164038734 - L1MEc LINE L1 -2109 4106 3361 811 314 32 16 chr5 35591429 35591865 -164038285 - L1MEc LINE L1 -3459 2756 2314 797 238 32 61 chr5 35591961 35592391 -164037759 - LTR40b LTR ERVL -40 422 32 2139 293 61 36 chr5 35592406 35592721 -164037429 - L1MEc LINE L1 -4056 2340 2034 3757 111 88 2 chr5 35592721 35593314 -164036836 - LTR9B LTR ERV1 0 644 1 2139 293 61 36 chr5 35593314 35594518 -164035632 - L1MEc LINE L1 -4362 2034 783 2428 133 79 11 chr5 35594538 35594836 -164035314 + LTR21A LTR ERV1 1 340 -165 5881 58 13 14 chr5 35594836 35595617 -164034533 + LTR17 LTR ERV1 1 780 0 2428 133 79 11 chr5 35595617 35595761 -164034389 + LTR21A LTR ERV1 340 473 -32 270 116 0 0 chr5 35595761 35595804 -164034346 + (TC)n Simple_repeat Simple_repeat 2 44 0 749 306 11 22 chr5 35595820 35596095 -164034055 - L1MEc LINE L1 -5640 756 485 600 150 0 10 chr5 35596099 35596199 -164033951 + MER4A LTR ERV1 1 99 -565 1677 130 160 88 chr5 35596199 35596575 -164033575 + MER4A LTR ERV1 262 664 0 988 301 54 20 chr5 35596575 35596980 -164033170 - L1MEc LINE L1 -5913 483 65 37 99 0 0 chr5 35597571 35597692 -164032458 + AT_rich Low_complexity Low_complexity 1 121 0 22 0 0 0 chr5 35598031 35598053 -164032097 + AT_rich Low_complexity Low_complexity 1 22 0 425 314 6 6 chr5 35598285 35598454 -164031696 + GA-rich Low_complexity Low_complexity 3 171 0 24 32 0 0 chr5 35599541 35599572 -164030578 + AT_rich Low_complexity Low_complexity 1 31 0 516 16 0 0 chr5 35599634 35599695 -164030455 + (CA)n Simple_repeat Simple_repeat 2 62 0 196 369 41 33 chr5 35599698 35599820 -164030330 + MIR SINE MIR 20 142 -120 345 327 92 24 chr5 35600624 35600960 -164029190 - L1M4 LINE L1 -770 5376 5018 1884 164 16 0 chr5 35601921 35602226 -164027924 - AluSx SINE Alu -2 310 1 3366 149 27 3 chr5 35602397 35602982 -164027168 + LTR43 LTR ERV1 1 599 -3 273 268 31 21 chr5 35604283 35604380 -164025770 - MLT1L LTR MaLR -5 610 513 399 309 76 50 chr5 35604520 35604821 -164025329 - MLT1L LTR MaLR -295 320 12 21 0 0 0 chr5 35605079 35605100 -164025050 + AT_rich Low_complexity Low_complexity 1 21 0 2279 95 14 0 chr5 35605781 35606077 -164024073 - AluSp SINE Alu -13 300 1 22 35 0 0 chr5 35607010 35607039 -164023111 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 35607218 35607246 -164022904 + AT_rich Low_complexity Low_complexity 1 28 0 43 0 0 0 chr5 35607340 35607383 -164022767 + AT_rich Low_complexity Low_complexity 1 43 0 346 234 112 46 chr5 35607845 35608042 -164022108 - L1ME LINE L1 -385 5736 5527 307 258 39 55 chr5 35608589 35608717 -164021433 - MLT1L LTR MaLR -326 289 164 2277 146 5 19 chr5 35608890 35609259 -164020891 - THE1B LTR MaLR 0 364 1 10915 97 2 66 chr5 35609259 35610947 -164019203 - THE1B-int LTR MaLR 0 1580 1 2067 169 8 19 chr5 35610947 35611313 -164018837 - THE1B LTR MaLR 0 364 3 848 280 46 61 chr5 35611315 35611858 -164018292 - L1ME LINE L1 -1998 4148 3614 240 277 12 60 chr5 35612280 35612363 -164017787 - MIR SINE MIR -116 146 68 265 97 0 139 chr5 35613279 35613351 -164016799 - L1MC3 LINE L1 -8 7777 7716 2037 162 64 20 chr5 35614155 35614562 -164015588 - MSTB LTR MaLR -1 425 1 32 26 0 0 chr5 35614682 35614721 -164015429 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr5 35616098 35616123 -164014027 + AT_rich Low_complexity Low_complexity 1 25 0 2479 80 0 0 chr5 35617920 35618231 -164011919 - AluY SINE Alu 0 311 1 1393 260 87 31 chr5 35618562 35618642 -164011508 + L1MD3 LINE L1 5291 5365 -2630 1684 184 0 0 chr5 35618642 35618935 -164011215 + AluJb SINE Alu 7 299 -13 1393 260 87 31 chr5 35618935 35619546 -164010604 + L1MD3 LINE L1 5365 6017 -1978 280 221 47 47 chr5 35619577 35619663 -164010487 + MER58B DNA MER1_type 226 311 -30 1980 141 13 49 chr5 35619664 35620053 -164010097 - THE1C LTR MaLR 0 375 1 1705 190 7 0 chr5 35620137 35620447 -164009703 - AluSx SINE Alu 0 312 1 787 131 8 0 chr5 35620453 35620583 -164009567 - L1PA15 LINE L1 -3 6162 6032 897 81 0 59 chr5 35620583 35620719 -164009431 + L1P4 LINE L1 5616 5743 -422 222 304 0 13 chr5 35620812 35620891 -164009259 + CT-rich Low_complexity Low_complexity 1 78 0 206 273 39 0 chr5 35620851 35620928 -164009222 + (TCTA)n Simple_repeat Simple_repeat 1 80 0 * 21 0 0 0 chr5 35621089 35621110 -164009040 + AT_rich Low_complexity Low_complexity 1 21 0 270 365 18 55 chr5 35621208 35621427 -164008723 + MIR SINE MIR 20 230 -32 264 242 57 105 chr5 35622251 35622375 -164007775 - LTR67 LTR ERVL -8 549 432 245 269 39 0 chr5 35622725 35622803 -164007347 + Charlie8 DNA MER1_type 57 137 -2280 9460 111 13 2 chr5 35622969 35624308 -164005842 + THE1B-int LTR MaLR 227 1580 0 2084 150 27 35 chr5 35624308 35624675 -164005475 + THE1B LTR MaLR 1 364 0 272 167 14 0 chr5 35624921 35624993 -164005157 + (TA)n Simple_repeat Simple_repeat 1 73 0 335 253 20 61 chr5 35624993 35625092 -164005058 + L1MC4 LINE L1 6613 6707 -1335 29 28 0 0 chr5 35625815 35625851 -164004299 + AT_rich Low_complexity Low_complexity 1 36 0 22 88 0 0 chr5 35625994 35626051 -164004099 + AT_rich Low_complexity Low_complexity 1 57 0 201 184 69 11 chr5 35627143 35627230 -164002920 + (TA)n Simple_repeat Simple_repeat 2 93 0 5456 158 26 23 chr5 35628509 35628843 -164001307 - L1MA5A LINE L1 -1 6296 5964 1950 141 10 0 chr5 35628843 35629133 -164001017 - AluSx SINE Alu -19 293 1 5456 158 26 23 chr5 35629133 35629896 -164000254 - L1MA5A LINE L1 -333 5964 5195 1106 239 100 48 chr5 35629909 35630348 -163999802 + MLT1C LTR MaLR 1 462 -5 403 283 72 30 chr5 35630843 35631009 -163999141 - MER93a LTR ERV1 -229 173 1 271 236 25 0 chr5 35631101 35631267 -163998883 + CT-rich Low_complexity Low_complexity 1 170 0 2096 113 3 0 chr5 35631517 35631841 -163998309 - AluSp SINE Alu 0 325 1 21 0 0 0 chr5 35634771 35634792 -163995358 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 35635974 35636009 -163994141 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 35636086 35636114 -163994036 + AT_rich Low_complexity Low_complexity 1 28 0 1576 251 57 42 chr5 35636457 35636999 -163993151 + MER44D DNA MER2_type 1 605 0 216 0 0 0 chr5 35637082 35637106 -163993044 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1370 23 0 23 chr5 35637139 35637333 -163992817 - L1PA2 LINE L1 0 6155 5988 384 280 0 0 chr5 35638696 35638789 -163991361 + U13 snRNA snRNA 12 104 0 230 216 0 0 chr5 35638855 35638906 -163991244 + L1MC4 LINE L1 6652 6702 -1340 * 287 250 57 0 chr5 35638872 35638960 -163991190 - L1MC4 LINE L1 -1340 6702 6610 1619 224 18 3 chr5 35639251 35639577 -163990573 + MLT1A1 LTR MaLR 34 364 -1 326 227 18 45 chr5 35639577 35639683 -163990467 - LTR40c LTR ERVL -211 254 152 347 138 17 0 chr5 35639816 35639874 -163990276 - LTR40a LTR ERVL -377 142 84 281 259 63 42 chr5 35640298 35640441 -163989709 - LTR33A LTR ERVL 0 523 378 368 262 170 44 chr5 35640635 35640841 -163989309 - LTR50 LTR ERVL -545 250 19 2090 124 28 31 chr5 35641446 35641802 -163988348 - THE1A LTR MaLR 0 355 1 10786 113 14 1 chr5 35641802 35643361 -163986789 - THE1A-int LTR MaLR 0 1580 1 1907 140 16 44 chr5 35643361 35643726 -163986424 - THE1A LTR MaLR 0 355 1 266 319 0 0 chr5 35644701 35644773 -163985377 + MER5A DNA MER1_type 9 80 -109 1839 194 44 47 chr5 35644929 35645402 -163984748 + MER41B LTR ERV1 131 602 -33 489 301 39 82 chr5 35645922 35646546 -163983604 + HAL1b LINE L1 13 609 -739 878 267 80 37 chr5 35646863 35647189 -163982961 + MER93a LTR ERV1 63 402 0 1203 259 7 31 chr5 35647228 35647521 -163982629 + AluJb SINE Alu 1 286 -16 368 262 68 91 chr5 35647540 35647967 -163982183 + HAL1b LINE L1 932 1348 0 28 29 0 0 chr5 35648571 35648606 -163981544 + AT_rich Low_complexity Low_complexity 1 35 0 761 114 0 0 chr5 35648752 35648866 -163981284 + AluSg/x SINE Alu 189 302 -10 25 83 0 0 chr5 35649241 35649301 -163980849 + AT_rich Low_complexity Low_complexity 1 60 0 211 214 24 0 chr5 35649434 35649476 -163980674 + CT-rich Low_complexity Low_complexity 2 44 0 29 0 0 0 chr5 35649712 35649741 -163980409 + AT_rich Low_complexity Low_complexity 1 29 0 2033 144 39 28 chr5 35649899 35650259 -163979891 + THE1B LTR MaLR 1 364 0 5684 128 171 61 chr5 35650259 35650737 -163979413 + THE1B-int LTR MaLR 1 425 -1155 2217 72 7 7 chr5 35650737 35651027 -163979123 - AluY SINE Alu -6 305 16 5684 128 171 61 chr5 35651027 35651681 -163978469 + THE1B-int LTR MaLR 425 1258 -322 1797 224 78 23 chr5 35651875 35652309 -163977841 + MER70A LTR ERVL 1 458 -14 2062 132 7 0 chr5 35652585 35652881 -163977269 + AluSx SINE Alu 1 298 -14 29 0 8 0 chr5 35653592 35653663 -163976487 + AT_rich Low_complexity Low_complexity 1 29 0 3848 246 59 77 chr5 35655362 35655602 -163974548 + L1M4 LINE L1 16 259 -6283 2168 87 0 13 chr5 35655602 35655734 -163974416 + AluY SINE Alu 1 133 -178 216 0 0 0 chr5 35655734 35655758 -163974392 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2168 87 0 13 chr5 35655758 35655925 -163974225 + AluY SINE Alu 133 296 -15 3848 246 59 77 chr5 35655925 35656744 -163973406 + L1M4 LINE L1 259 1035 -5507 458 110 0 14 chr5 35656744 35656817 -163973333 - MADE1 DNA Mariner -4 76 5 3848 246 59 77 chr5 35656817 35657445 -163972705 + L1M4 LINE L1 1035 1673 -4869 29 28 0 0 chr5 35659642 35659678 -163970472 + AT_rich Low_complexity Low_complexity 1 36 0 272 272 54 22 chr5 35659678 35659770 -163970380 + MIR SINE MIR 168 262 0 1101 225 9 0 chr5 35660385 35660607 -163969543 - AluJo SINE Alu -2 310 87 204 222 0 0 chr5 35661703 35661739 -163968411 + polypurine Low_complexity Low_complexity 5 40 0 23 0 0 0 chr5 35663337 35663360 -163966790 + AT_rich Low_complexity Low_complexity 1 23 0 617 248 0 0 chr5 35665348 35665481 -163964669 + FLAM_A SINE Alu 1 133 0 29 70 0 0 chr5 35666943 35667000 -163963150 + AT_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr5 35667043 35667065 -163963085 + AT_rich Low_complexity Low_complexity 1 22 0 2588 175 34 1 chr5 35667192 35667810 -163962340 + L1P4 LINE L1 4821 5455 -710 1168 287 65 81 chr5 35668045 35668919 -163961231 + MER89-int LTR ERV1 147 1006 -5795 2123 107 0 49 chr5 35669335 35669661 -163960489 + AluSx SINE Alu 1 310 -2 196 349 115 65 chr5 35669902 35670346 -163959804 - L2 LINE L2 -1122 2192 1727 2126 103 0 4 chr5 35670351 35670664 -163959486 + AluSc SINE Alu 1 312 0 894 232 172 22 chr5 35671105 35671555 -163958595 - L1ME2 LINE L1 -100 6064 5457 27 49 0 0 chr5 35671776 35671817 -163958333 + AT_rich Low_complexity Low_complexity 1 41 0 920 286 94 23 chr5 35671820 35672426 -163957724 - L1ME2 LINE L1 -1043 5103 4455 215 149 92 11 chr5 35672526 35672613 -163957537 + (TA)n Simple_repeat Simple_repeat 1 94 0 21 36 0 0 chr5 35673162 35673190 -163956960 + AT_rich Low_complexity Low_complexity 1 28 0 308 198 0 23 chr5 35673417 35673503 -163956647 + (TATG)n Simple_repeat Simple_repeat 4 87 0 186 191 0 0 chr5 35673521 35673563 -163956587 + (CA)n Simple_repeat Simple_repeat 1 42 0 1585 177 10 11 chr5 35673653 35674109 -163956041 + L1M2 LINE L1 5083 5536 -744 711 150 29 14 chr5 35674214 35674354 -163955796 + L1M2 LINE L1 5535 5676 -621 * 1064 136 23 0 chr5 35674349 35674526 -163955624 + L1M2 LINE L1 5553 5733 -564 27 29 0 0 chr5 35675216 35675250 -163954900 + AT_rich Low_complexity Low_complexity 1 34 0 1965 109 26 22 chr5 35675286 35675598 -163954552 - AluSp SINE Alu 0 313 1 679 290 16 57 chr5 35676410 35676655 -163953495 + MIR SINE MIR 20 254 -8 1088 296 83 8 chr5 35678152 35678514 -163951636 - MLT1H LTR MaLR -4 545 157 34 55 0 0 chr5 35678628 35678683 -163951467 + AT_rich Low_complexity Low_complexity 1 55 0 1952 114 3 3 chr5 35678705 35679003 -163951147 - L1PB1 LINE L1 -4 6147 5850 485 44 17 0 chr5 35679004 35679079 -163951071 + L1MC/D LINE L1 5371 5451 -719 1497 168 59 3 chr5 35679143 35679447 -163950703 + L1MC1 LINE L1 6011 6331 -2 1335 250 140 29 chr5 35679544 35680159 -163949991 - L1ME1 LINE L1 -229 6006 5324 683 231 87 108 chr5 35681888 35682404 -163947746 - L1ME1 LINE L1 -893 5322 4818 1570 163 71 52 chr5 35682436 35682804 -163947346 - THE1C LTR MaLR 0 375 1 8638 132 52 35 chr5 35682804 35684358 -163945792 - THE1C-int LTR MaLR 0 1580 2 1019 170 41 32 chr5 35684359 35684577 -163945573 - THE1C LTR MaLR 0 375 156 4112 131 11 0 chr5 35684579 35685219 -163944931 - L1PA8A LINE L1 -1949 4197 3551 6751 151 33 5 chr5 35685219 35687118 -163943032 + L1PA8A LINE L1 4197 6128 -3 861 138 127 14 chr5 35687120 35687292 -163942858 - THE1C LTR MaLR -164 191 1 489 263 141 5 chr5 35687292 35687505 -163942645 - L1ME1 LINE L1 -1430 4785 4544 536 288 68 0 chr5 35687525 35687702 -163942448 - L1ME1 LINE L1 -6093 303 115 428 316 84 60 chr5 35689064 35689549 -163940601 + HAL1 LINE L1 956 1452 -1055 455 313 61 49 chr5 35689852 35690104 -163940046 + MLT1G1 LTR MaLR 1 240 -309 961 169 57 0 chr5 35791743 35791920 -163838230 - MSTA LTR MaLR 0 428 242 1577 127 0 0 chr5 35792140 35792360 -163837790 + AluSx SINE Alu 35 254 -58 1388 187 20 12 chr5 35792701 35792952 -163837198 - MSTA LTR MaLR -175 253 1 6298 221 39 32 chr5 35793674 35795403 -163834747 + L1P LINE L1 2375 4114 -2032 236 98 49 0 chr5 35795506 35795547 -163834603 - Alu SINE Alu -256 45 3 2040 121 0 0 chr5 35795568 35795858 -163834292 + AluSq SINE Alu 4 293 -20 22 0 0 0 chr5 35795858 35795880 -163834270 + AT_rich Low_complexity Low_complexity 1 22 0 398 277 9 27 chr5 35797138 35797250 -163832900 - L2 LINE L2 -2 3311 3202 1312 200 22 82 chr5 35797396 35797811 -163832339 - MLT1B LTR MaLR 0 390 1 4850 151 32 62 chr5 35797953 35798772 -163831378 - L1PA15 LINE L1 -6 6159 5317 3587 60 6 0 chr5 35798772 35799239 -163830911 + L1PA7 LINE L1 5683 6152 -2 4850 151 32 62 chr5 35799239 35799592 -163830558 - L1PA15 LINE L1 -848 5317 5005 1835 83 4 29 chr5 35799592 35799869 -163830281 - L1PA13 LINE L1 -3 6160 5891 4850 151 32 62 chr5 35799869 35799969 -163830181 - L1PA15 LINE L1 -1160 5005 4904 318 67 0 0 chr5 35800372 35800417 -163829733 + (TA)n Simple_repeat Simple_repeat 2 46 0 186 341 68 11 chr5 35800454 35800542 -163829608 - L3b LINE CR1 -9 1574 1482 624 256 10 50 chr5 35800995 35801194 -163828956 + MLT1D LTR MaLR 1 191 -314 1295 242 11 55 chr5 35801312 35801692 -163828458 + MLT1B LTR MaLR 28 390 0 611 224 166 27 chr5 35801692 35801915 -163828235 + MLT1D LTR MaLR 252 505 0 2279 58 7 0 chr5 35802397 35802674 -163827476 + AluY SINE Alu 24 302 -9 261 346 55 0 chr5 35803025 35803152 -163826998 + MLT1I LTR MaLR 6 139 -270 284 223 54 6 chr5 35803157 35803284 -163826866 + MER2 DNA MER2_type 1 205 -140 429 171 26 0 chr5 35803332 35803408 -163826742 + MER2 DNA MER2_type 267 344 -1 357 298 42 59 chr5 35803415 35803653 -163826497 + MLT1I LTR MaLR 154 387 -22 200 221 0 15 chr5 35804119 35804187 -163825963 + CT-rich Low_complexity Low_complexity 2 68 0 22 35 0 0 chr5 35804675 35804704 -163825446 + AT_rich Low_complexity Low_complexity 1 29 0 2128 132 16 0 chr5 35805097 35805401 -163824749 - AluSg1 SINE Alu 0 309 1 895 119 0 0 chr5 35805483 35805617 -163824533 + L1PA16 LINE L1 6033 6166 0 59 75 0 7 chr5 35805976 35806021 -163824129 + AT_rich Low_complexity Low_complexity 1 45 -101 1672 137 0 8 chr5 35806021 35806277 -163823873 + AluSx SINE Alu 35 288 -24 59 75 0 7 chr5 35806277 35806378 -163823772 + AT_rich Low_complexity Low_complexity 45 146 0 285 338 108 79 chr5 35806583 35807177 -163822973 + L2 LINE L2 2355 2965 -349 375 328 70 5 chr5 35807481 35807667 -163822483 + MER67A LTR ERV1 346 543 0 941 174 22 121 chr5 35807788 35808176 -163821974 - LTR37A LTR ERV1 0 426 1 243 366 45 36 chr5 35808255 35808367 -163821783 + L2 LINE L2 3158 3270 -2 1096 211 104 47 chr5 35808388 35808791 -163821359 + LTR56 LTR ERV1 20 445 0 2165 81 0 3 chr5 35808934 35809241 -163820909 - AluY SINE Alu 0 306 1 234 105 0 0 chr5 35809645 35809683 -163820467 + (TG)n Simple_repeat Simple_repeat 1 38 0 953 266 125 68 chr5 35809785 35810289 -163819861 - MLT1H LTR MaLR -14 535 3 270 314 0 0 chr5 35810389 35810475 -163819675 - MER63 DNA MER1_type -285 777 692 1086 158 19 0 chr5 35811120 35811329 -163818821 + L1MA8 LINE L1 6074 6286 -5 818 158 42 37 chr5 35811330 35811520 -163818630 - L1MA9 LINE L1 -29 6283 6093 2007 147 0 6 chr5 35811872 35812186 -163817964 + AluSx SINE Alu 1 312 0 23 33 0 0 chr5 35812291 35812321 -163817829 + AT_rich Low_complexity Low_complexity 1 30 0 201 147 0 0 chr5 35812403 35812437 -163817713 + (A)n Simple_repeat Simple_repeat 1 34 0 241 218 18 0 chr5 35812591 35812646 -163817504 + (TA)n Simple_repeat Simple_repeat 2 57 0 256 277 10 10 chr5 35813634 35813735 -163816415 + (CA)n Simple_repeat Simple_repeat 2 102 0 2262 90 10 0 chr5 35814434 35814724 -163815426 + AluSg SINE Alu 1 293 -17 426 56 0 0 chr5 35815251 35815305 -163814845 + THE1C LTR MaLR 1 54 -321 379 273 49 14 chr5 35817409 35817552 -163812598 - MLT1E LTR MaLR 0 593 446 2162 206 51 11 chr5 35817598 35817683 -163812467 - L1 LINE L1 -1296 4850 4770 207 88 0 0 chr5 35817683 35817717 -163812433 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 2162 206 51 11 chr5 35817717 35818179 -163811971 - L1 LINE L1 -1376 4770 4281 * 2727 148 97 28 chr5 35818174 35818713 -163811437 + L1PB4 LINE L1 5581 6156 0 801 336 30 57 chr5 35818734 35819171 -163810979 - MLT1E LTR MaLR -147 446 22 1650 74 35 0 chr5 35819780 35820010 -163810140 + MER75B DNA T2_type 1 238 -5 1725 182 13 50 chr5 35820231 35820610 -163809540 - MLT1A1 LTR MaLR 0 365 1 266 0 29 0 chr5 35821439 35821473 -163808677 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1198 231 45 34 chr5 35822149 35822497 -163807653 + MLT1A1 LTR MaLR 11 467 0 25 0 0 0 chr5 35823436 35823461 -163806689 + AT_rich Low_complexity Low_complexity 1 25 0 25 51 0 0 chr5 35823726 35823765 -163806385 + AT_rich Low_complexity Low_complexity 1 39 0 372 270 42 42 chr5 35823965 35824154 -163805996 - MER112 DNA MER1_type -5 255 67 1576 136 18 4 chr5 35824853 35825133 -163805017 - L1MA4 LINE L1 -4 6296 6013 2720 3 0 3 chr5 35825170 35825471 -163804679 + AluYa5 SINE Alu 1 300 -11 5599 120 11 15 chr5 35825613 35826008 -163804142 - L1PA11 LINE L1 0 6174 5779 4628 127 3 9 chr5 35826008 35826703 -163803447 - LTR8 LTR ERV1 0 691 1 5599 120 11 15 chr5 35826703 35828077 -163802073 - L1PA11 LINE L1 -395 5779 4432 633 192 354 28 chr5 35828601 35828718 -163801432 + MLT1A2 LTR MaLR 1 79 -349 2058 90 40 13 chr5 35828718 35829018 -163801132 - AluSq SINE Alu -5 308 1 633 192 354 28 chr5 35829018 35829181 -163800969 + MLT1A2 LTR MaLR 79 428 0 28 0 0 0 chr5 35829184 35829212 -163800938 + AT_rich Low_complexity Low_complexity 1 28 0 1688 259 75 47 chr5 35829657 35830620 -163799530 + L1M4 LINE L1 3702 4691 -1455 1177 225 51 18 chr5 35830959 35831292 -163798858 - MER2 DNA MER2_type 0 344 1 21 0 0 0 chr5 35831620 35831641 -163798509 + AT_rich Low_complexity Low_complexity 1 21 0 407 356 77 49 chr5 35832082 35832615 -163797535 - L2 LINE L2 -1067 2247 1700 194 373 107 40 chr5 35833465 35833615 -163796535 + MIR SINE MIR 62 221 -41 184 418 20 0 chr5 35834528 35834626 -163795524 + MIR SINE MIR 48 147 -115 535 272 8 62 chr5 35835449 35835703 -163794447 + MLT1E LTR MaLR 1 240 -327 2007 167 20 41 chr5 35835873 35836263 -163793887 + MSTB LTR MaLR 45 426 0 536 256 36 0 chr5 35836288 35836425 -163793725 + MLT1F1 LTR MaLR 426 567 0 215 348 191 15 chr5 35837183 35837387 -163792763 - L3 LINE CR1 -93 1484 1245 1205 303 52 32 chr5 35838849 35839350 -163790800 + LTR40a LTR ERVL 1 511 -8 22 56 0 0 chr5 35839958 35839994 -163790156 + AT_rich Low_complexity Low_complexity 1 36 0 357 274 122 57 chr5 35840022 35840252 -163789898 + L1M4 LINE L1 2929 3173 -2973 181 136 23 23 chr5 35840254 35840298 -163789852 + GA-rich Low_complexity Low_complexity 1 44 0 3552 133 27 2 chr5 35840311 35840866 -163789284 - MER61E LTR ERV1 0 569 1 237 221 15 0 chr5 35840871 35840939 -163789211 + L1M4 LINE L1 3191 3259 -2887 30 59 0 0 chr5 35841155 35841206 -163788944 + AT_rich Low_complexity Low_complexity 1 51 0 452 223 27 18 chr5 35841300 35841412 -163788738 + MER4C LTR ERV1 1 113 -352 410 196 11 22 chr5 35841501 35841593 -163788557 + LTR34 LTR ERV1 429 519 -180 667 250 28 11 chr5 35841627 35841807 -163788343 + MER4C LTR ERV1 283 465 0 3990 182 11 4 chr5 35842517 35843222 -163786928 - MER50 LTR ERV1 -24 710 1 27 49 0 0 chr5 35843561 35843602 -163786548 + AT_rich Low_complexity Low_complexity 1 41 0 1128 128 12 0 chr5 35844238 35844410 -163785740 - AluSg/x SINE Alu -12 300 127 1647 132 24 28 chr5 35844410 35844698 -163785452 + MER44D DNA MER2_type 53 609 0 294 353 43 7 chr5 35844701 35844840 -163785310 - MIR SINE MIR -113 149 6 1041 64 57 0 chr5 35844841 35844981 -163785169 - AluY SINE Alu -6 305 158 294 91 0 0 chr5 35845082 35845126 -163785024 + L1P LINE L1 4424 4467 -1679 44 35 0 0 chr5 35845172 35845230 -163784920 + AT_rich Low_complexity Low_complexity 1 58 0 186 118 0 0 chr5 35846218 35846252 -163783898 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 242 318 61 61 chr5 35846366 35846514 -163783636 + L2 LINE L2 3159 3306 -7 285 255 0 43 chr5 35847294 35847388 -163782762 + L1MC4 LINE L1 6614 6703 -1339 261 250 0 0 chr5 35847388 35847464 -163782686 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 236 313 38 0 chr5 35847517 35847597 -163782553 - MIR SINE MIR -54 208 126 436 338 43 23 chr5 35847928 35848227 -163781923 + MLT1I LTR MaLR 97 401 -8 24 67 0 0 chr5 35848406 35848451 -163781699 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr5 35848861 35848897 -163781253 + AT_rich Low_complexity Low_complexity 1 36 0 277 43 43 0 chr5 35852241 35852288 -163777862 + (CTATT)n Simple_repeat Simple_repeat 2 50 0 337 230 54 0 chr5 35852680 35852753 -163777397 + MER63 DNA MER1_type 27 729 -107 1235 226 130 31 chr5 35852753 35853169 -163776981 + MLT1C LTR MaLR 3 459 -8 419 244 7 7 chr5 35853169 35853285 -163776865 + MER63 DNA MER1_type 715 1055 -6 231 122 0 0 chr5 35853581 35853622 -163776528 - L1MA4A LINE L1 -7 6296 6256 186 71 0 0 chr5 35853921 35853949 -163776201 + (TA)n Simple_repeat Simple_repeat 1 28 0 352 358 130 12 chr5 35854146 35854476 -163775674 - L1ME LINE L1 -501 5663 5295 641 225 8 0 chr5 35855241 35855370 -163774780 - FLAM_A SINE Alu -3 130 1 29 0 0 0 chr5 35855372 35855401 -163774749 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 35855455 35855484 -163774666 + AT_rich Low_complexity Low_complexity 1 29 0 6306 34 0 0 chr5 35856404 35857151 -163772999 - L1PA4 LINE L1 -8 6147 5401 1944 117 0 18 chr5 35857233 35857515 -163772635 + AluSg SINE Alu 1 277 -33 1181 51 17 11 chr5 35857517 35857692 -163772458 + (GAAA)n Simple_repeat Simple_repeat 2 177 0 22 56 0 0 chr5 35860138 35860174 -163769976 + AT_rich Low_complexity Low_complexity 1 36 0 681 322 98 42 chr5 35861217 35861425 -163768725 - LTR16C LTR ERVL -1 490 295 2255 140 89 8 chr5 35861425 35861819 -163768331 + MSTA LTR MaLR 3 428 0 681 322 98 42 chr5 35861819 35861989 -163768161 - LTR16C LTR ERVL -196 295 91 24 53 0 0 chr5 35862722 35862760 -163767390 + AT_rich Low_complexity Low_complexity 1 38 0 2145 110 3 0 chr5 35863134 35863435 -163766715 - AluSc SINE Alu -7 302 1 434 218 109 27 chr5 35864119 35864266 -163765884 + MLT1H LTR MaLR 1 159 -390 2274 78 10 3 chr5 35864508 35864817 -163765333 + AluY SINE Alu 1 311 0 2053 178 38 59 chr5 35864913 35865390 -163764760 - MLT1C LTR MaLR 0 467 1 414 211 92 0 chr5 35865400 35865509 -163764641 - MLT1H LTR MaLR -5 544 426 338 310 91 21 chr5 35865619 35865806 -163764344 + L2 LINE L2 3098 3297 -16 218 138 77 15 chr5 35865828 35865893 -163764257 + (TTAA)n Simple_repeat Simple_repeat 3 71 0 261 185 15 31 chr5 35868244 35868309 -163761841 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 22 0 0 0 chr5 35869381 35869403 -163760747 + AT_rich Low_complexity Low_complexity 1 22 0 675 205 0 0 chr5 35869787 35869914 -163760236 + FLAM_A SINE Alu 4 130 -3 218 96 0 96 chr5 35869917 35869969 -163760181 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1938 130 31 0 chr5 35870138 35870431 -163759719 + AluSx SINE Alu 1 302 -10 186 103 0 0 chr5 35870859 35870885 -163759265 + (CA)n Simple_repeat Simple_repeat 1 55 0 186 103 0 0 chr5 35870885 35870914 -163759236 + (CA)n Simple_repeat Simple_repeat 2 30 0 1769 209 58 78 chr5 35872515 35872909 -163757241 + MLT1D LTR MaLR 3 386 -119 1474 204 81 20 chr5 35872909 35873253 -163756897 - MLT1A1 LTR MaLR 0 365 1 1769 209 58 78 chr5 35873253 35873371 -163756779 + MLT1D LTR MaLR 386 505 0 1687 190 0 3 chr5 35873573 35873862 -163756288 + AluJb SINE Alu 3 290 -22 21 0 0 0 chr5 35874361 35874382 -163755768 + AT_rich Low_complexity Low_complexity 1 21 0 248 0 31 0 chr5 35874514 35874546 -163755604 + (TG)n Simple_repeat Simple_repeat 2 34 0 429 268 17 84 chr5 35874954 35875133 -163755017 + MLT1F LTR MaLR 4 170 -372 225 65 0 0 chr5 35875490 35875521 -163754629 + (TG)n Simple_repeat Simple_repeat 2 32 0 416 19 19 0 chr5 35876341 35876394 -163753756 + (TG)n Simple_repeat Simple_repeat 2 55 0 1995 181 33 44 chr5 35876395 35876949 -163753201 + MLT2A2 LTR ERVL 3 554 0 1776 32 9 0 chr5 35879046 35879266 -163750884 + L1PA4 LINE L1 5929 6150 -5 22 35 0 0 chr5 35879645 35879674 -163750476 + AT_rich Low_complexity Low_complexity 1 29 0 367 300 80 45 chr5 35882099 35882416 -163747734 + L1MC/D LINE L1 5283 5609 -512 41 93 0 0 chr5 35882428 35882546 -163747604 + AT_rich Low_complexity Low_complexity 1 118 0 232 302 10 10 chr5 35882562 35882658 -163747492 + L1MC/D LINE L1 5711 5806 -2002 2865 145 57 32 chr5 35882665 35883306 -163746844 + L1P5 LINE L1 5084 5780 -376 242 57 0 0 chr5 35883301 35883336 -163746814 - L1P4 LINE L1 -477 5686 5652 * 1378 124 0 0 chr5 35883347 35883548 -163746602 + L1PB4 LINE L1 5580 5780 -376 * 2354 77 3 6 chr5 35883543 35883740 -163746410 - L1P4 LINE L1 -477 5686 5489 2153 102 0 55 chr5 35883740 35884065 -163746085 - AluSg SINE Alu -3 307 1 2354 77 3 6 chr5 35884065 35884192 -163745958 - L1P4 LINE L1 -674 5489 5363 3273 96 4 18 chr5 35884192 35884679 -163745471 + L1PA13 LINE L1 5676 6157 -6 1788 199 0 37 chr5 35884688 35884725 -163745425 + L1PB4 LINE L1 5769 5806 -350 210 91 0 0 chr5 35884725 35884758 -163745392 + (CA)n Simple_repeat Simple_repeat 2 34 0 1788 199 0 37 chr5 35884758 35885122 -163745028 + L1PB4 LINE L1 5806 6155 -1 298 151 27 0 chr5 35886443 35886516 -163743634 + (TG)n Simple_repeat Simple_repeat 2 76 0 24 0 0 0 chr5 35886516 35886540 -163743610 + AT_rich Low_complexity Low_complexity 1 24 0 228 143 0 0 chr5 35886540 35886582 -163743568 + (CA)n Simple_repeat Simple_repeat 2 43 0 260 89 0 22 chr5 35887610 35887655 -163742495 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4746 56 0 0 chr5 35888002 35888591 -163741559 + L1PA7 LINE L1 5560 6148 -6 2007 135 3 26 chr5 35889567 35889871 -163740279 + AluSx SINE Alu 2 298 -14 208 221 26 13 chr5 35891740 35891817 -163738333 + (TA)n Simple_repeat Simple_repeat 1 78 0 435 194 23 11 chr5 35891837 35892012 -163738138 + (TA)n Simple_repeat Simple_repeat 2 178 0 1278 169 20 8 chr5 35892369 35892618 -163737532 - Tigger2a DNA MER2_type -2 432 181 962 169 5 51 chr5 35892670 35892865 -163737285 - Tigger2a DNA MER2_type -248 186 1 691 140 2 2 chr5 35893473 35893598 -163736552 - LTR38B LTR ERV1 -12 599 476 2282 154 0 5 chr5 35893598 35893974 -163736176 - LTR38B LTR ERV1 -236 374 1 333 305 67 79 chr5 35894918 35895324 -163734826 + MLT1J1 LTR MaLR 24 424 -22 180 111 0 0 chr5 35895711 35895738 -163734412 + (CA)n Simple_repeat Simple_repeat 2 28 0 383 283 69 25 chr5 35895881 35896157 -163733993 + L1M4 LINE L1 4116 4403 -1743 1781 199 5 28 chr5 35896477 35896874 -163733276 - L1PA16 LINE L1 0 6166 5779 1618 225 35 39 chr5 35896960 35897423 -163732727 - L1ME2 LINE L1 -8 6156 5696 1118 288 90 36 chr5 35897425 35898528 -163731622 + L1P4 LINE L1 4396 5562 -612 288 224 0 0 chr5 35898625 35898692 -163731458 + (TG)n Simple_repeat Simple_repeat 2 68 0 1021 321 54 6 chr5 35898692 35899193 -163730957 + L1ME3A LINE L1 5609 6133 -37 1036 278 48 68 chr5 35899579 35899988 -163730162 - LTR40a LTR ERVL -9 510 112 2382 62 0 37 chr5 35899988 35900310 -163729840 + AluY SINE Alu 1 310 -1 1036 278 48 68 chr5 35900310 35900418 -163729732 - LTR40a LTR ERVL -407 112 3 879 296 41 13 chr5 35900451 35900843 -163729307 + L1M4 LINE L1 3543 3945 -2201 548 248 291 21 chr5 35900850 35901418 -163728732 + Zaphod DNA AcHobo 297 1017 -3014 300 249 210 28 chr5 35901418 35901599 -163728551 + Zaphod DNA AcHobo 3818 4031 0 23 33 0 0 chr5 35901723 35901753 -163728397 + AT_rich Low_complexity Low_complexity 1 30 0 245 114 23 0 chr5 35901753 35901797 -163728353 - L1PB2 LINE L1 -2 6149 6105 2048 112 25 109 chr5 35901800 35902194 -163727956 + THE1B LTR MaLR 4 364 0 1035 177 57 104 chr5 35902211 35902527 -163727623 - AluJb SINE Alu 0 302 2 9225 196 20 61 chr5 35902544 35902845 -163727305 - L1PA16 LINE L1 -74 6808 6496 2034 123 3 10 chr5 35902845 35903154 -163726996 - AluSc SINE Alu -2 307 1 9225 196 20 61 chr5 35903154 35903205 -163726945 - L1PA16 LINE L1 -386 6496 6444 524 40 158 0 chr5 35903205 35903281 -163726869 - AluY SINE Alu -13 298 211 9225 196 20 61 chr5 35903281 35903975 -163726175 - L1PA16 LINE L1 -438 6444 5723 2096 126 0 0 chr5 35903975 35904269 -163725881 - AluSc SINE Alu -15 294 1 9225 196 20 61 chr5 35904269 35905365 -163724785 - L1PA16 LINE L1 -1159 5723 4830 2462 71 0 0 chr5 35905365 35905676 -163724474 - AluY SINE Alu 0 311 1 9225 196 20 61 chr5 35905676 35906945 -163723205 - L1PA16 LINE L1 -2052 4830 3510 329 282 97 46 chr5 35906923 35907139 -163723011 - L1PA16 LINE L1 -6114 749 523 * 1571 163 58 79 chr5 35907146 35907526 -163722624 + THE1C LTR MaLR 4 375 0 1674 220 21 13 chr5 35907530 35907917 -163722233 - L1PA16 LINE L1 -6347 516 127 380 317 17 0 chr5 35908049 35908169 -163721981 - MER94 DNA DNA -1 133 12 510 319 109 22 chr5 35908728 35909149 -163721001 + MLT1K LTR MaLR 85 561 -27 195 100 0 0 chr5 35910940 35910970 -163719180 + (T)n Simple_repeat Simple_repeat 1 30 0 192 214 0 0 chr5 35911609 35911665 -163718485 + (TG)n Simple_repeat Simple_repeat 1 56 0 1901 155 3 3 chr5 35911799 35912102 -163718048 - AluSx SINE Alu -9 303 1 37 0 0 0 chr5 35912208 35912245 -163717905 + AT_rich Low_complexity Low_complexity 1 37 0 1910 131 14 3 chr5 35912251 35912548 -163717602 + AluSq SINE Alu 1 300 -13 27 0 0 0 chr5 35914199 35914226 -163715924 + AT_rich Low_complexity Low_complexity 1 27 0 590 305 32 0 chr5 35914561 35914807 -163715343 - L1MC5 LINE L1 -48 7913 7660 519 212 53 99 chr5 35914818 35915120 -163715030 - L1MC5 LINE L1 -589 7372 7085 226 341 64 6 chr5 35915208 35915381 -163714769 - L1MC4a LINE L1 -1063 6745 6563 23 54 0 0 chr5 35915740 35915777 -163714373 + AT_rich Low_complexity Low_complexity 1 37 0 335 200 18 27 chr5 35916455 35916565 -163713585 - L1MD3 LINE L1 0 7995 7887 2379 58 0 23 chr5 35916643 35916953 -163713197 + AluY SINE Alu 1 303 -8 26 64 0 0 chr5 35917005 35917052 -163713098 + AT_rich Low_complexity Low_complexity 1 47 0 1900 113 47 0 chr5 35917293 35917567 -163712583 - AluSg SINE Alu -23 287 1 351 216 14 0 chr5 35917799 35917873 -163712277 - L1PB4 LINE L1 -3 6153 6079 184 75 25 25 chr5 35918091 35918131 -163712019 + (TA)n Simple_repeat Simple_repeat 1 40 0 252 0 0 0 chr5 35918689 35918717 -163711433 + (TA)n Simple_repeat Simple_repeat 1 28 0 329 143 0 16 chr5 35918717 35918780 -163711370 + (CA)n Simple_repeat Simple_repeat 1 62 0 233 233 0 0 chr5 35918780 35918823 -163711327 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 276 281 0 0 chr5 35918826 35918915 -163711235 + L1MC4 LINE L1 6615 6703 -1339 275 315 148 0 chr5 35919459 35919602 -163710548 + MIR SINE MIR 37 198 -64 244 325 0 0 chr5 35922392 35922475 -163707675 + L1ME1 LINE L1 6079 6161 -5 475 277 120 16 chr5 35922932 35923116 -163707034 - MER3 DNA MER1_type -5 204 2 681 215 76 5 chr5 35924356 35924579 -163705571 + Charlie5 DNA MER1_type 2348 2586 -26 1315 231 36 23 chr5 35925496 35925799 -163704351 - MLT1A1 LTR MaLR -57 308 2 588 263 24 14 chr5 35925816 35926025 -163704125 + L1MC3 LINE L1 4455 4665 -1481 6832 221 46 40 chr5 35926025 35927771 -163702379 + L1MC3 LINE L1 4942 6719 -1066 1777 152 54 0 chr5 35927771 35928067 -163702083 + AluSx SINE Alu 1 312 0 6832 221 46 40 chr5 35928067 35928638 -163701512 + L1MC3 LINE L1 6719 7285 -500 852 191 24 0 chr5 35928673 35928841 -163701309 + Tigger4(Zombi) DNA MER2_type 435 606 -2125 * 1555 144 22 7 chr5 35928837 35929114 -163701036 + Tigger4(Zombi) DNA MER2_type 2450 2730 -1 4254 26 0 0 chr5 35929115 35929651 -163700499 + L1PA4 LINE L1 5639 6174 0 912 219 64 112 chr5 35929656 35930049 -163700101 - MLT1A2 LTR MaLR 0 374 1 421 211 32 11 chr5 35930049 35930144 -163700006 + L1MC3 LINE L1 7682 7778 -7 310 272 96 103 chr5 35930281 35930729 -163699421 + L1MEc LINE L1 1113 1557 -4839 22 0 0 0 chr5 35930845 35930867 -163699283 + AT_rich Low_complexity Low_complexity 1 22 0 228 274 120 69 chr5 35932144 35932319 -163697831 + MLT1J LTR MaLR 1 184 -327 314 333 38 19 chr5 35932364 35932523 -163697627 + MLT1J2 LTR MaLR 266 427 -23 509 288 103 92 chr5 35932776 35932961 -163697189 + L1MEc LINE L1 3278 3459 -2756 2248 53 3 3 chr5 35932961 35933275 -163696875 + AluSc SINE Alu 1 314 0 509 288 103 92 chr5 35933275 35933699 -163696451 + L1MEc LINE L1 3459 3895 -2320 306 50 0 0 chr5 35935377 35935417 -163694733 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 1535 164 26 58 chr5 35936399 35936711 -163693439 - AluJo SINE Alu -10 302 1 196 353 39 45 chr5 35937158 35937314 -163692836 - MIR SINE MIR -73 189 35 1007 149 0 0 chr5 35937714 35937875 -163692275 - AluJb SINE Alu -7 305 145 241 67 0 0 chr5 35937876 35937906 -163692244 - Alu SINE Alu -128 172 143 428 231 125 0 chr5 35937931 35938035 -163692115 - AluJo SINE Alu -131 181 65 25 0 0 0 chr5 35938978 35939003 -163691147 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 35939300 35939328 -163690822 + AT_rich Low_complexity Low_complexity 1 28 0 606 28 0 0 chr5 35940766 35940838 -163689312 + (GA)n Simple_repeat Simple_repeat 1 72 0 337 274 48 48 chr5 35943507 35943631 -163686519 - MIR SINE MIR -50 212 89 21 0 0 0 chr5 35944008 35944029 -163686121 + AT_rich Low_complexity Low_complexity 1 21 0 214 191 0 0 chr5 35944606 35944648 -163685502 + T-rich Low_complexity Low_complexity 1 42 0 255 260 74 107 chr5 35945967 35946027 -163684123 - MIR SINE MIR -55 207 147 955 62 78 0 chr5 35946027 35946155 -163683995 + MER85 DNA T2_type 1 138 -1 255 260 74 107 chr5 35946155 35946288 -163683862 - MIR SINE MIR -115 147 16 281 186 0 71 chr5 35946714 35946784 -163683366 + MER53 DNA DNA 2 66 -123 234 0 0 0 chr5 35946786 35946812 -163683338 + (CA)n Simple_repeat Simple_repeat 1 26 0 1462 179 157 0 chr5 35946812 35947125 -163683025 - MER47A DNA MER2_type -4 362 1 309 51 0 0 chr5 35947127 35947166 -163682984 + (CA)n Simple_repeat Simple_repeat 2 40 0 203 220 20 0 chr5 35947270 35947320 -163682830 + (TA)n Simple_repeat Simple_repeat 1 51 0 340 150 0 0 chr5 35947320 35947380 -163682770 + MER53 DNA DNA 129 188 -1 243 61 0 0 chr5 35948722 35948755 -163681395 + (TA)n Simple_repeat Simple_repeat 2 34 0 293 196 36 0 chr5 35948765 35948821 -163681329 + MER94 DNA DNA 30 87 -47 24 32 0 0 chr5 35949071 35949102 -163681048 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 35949440 35949469 -163680681 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 35949612 35949640 -163680510 + AT_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr5 35950854 35950885 -163679265 + AT_rich Low_complexity Low_complexity 1 31 0 2218 60 4 4 chr5 35951943 35952267 -163677883 - AluY SINE Alu 0 324 1 912 187 0 0 chr5 35952327 35952508 -163677642 - AluJb SINE Alu 0 315 135 311 312 91 71 chr5 35952523 35952831 -163677319 + L2 LINE L2 1871 2184 -1130 2383 80 0 3 chr5 35953695 35954007 -163676143 - AluY SINE Alu 0 311 1 23 33 0 0 chr5 35954028 35954058 -163676092 + AT_rich Low_complexity Low_complexity 1 30 0 538 213 17 104 chr5 35954205 35954435 -163675715 - L1MA9 LINE L1 -42 6270 6061 211 272 99 25 chr5 35955499 35955580 -163674570 - MER5A DNA MER1_type -68 121 35 200 306 174 0 chr5 35955866 35955987 -163674163 - MIR SINE MIR -119 143 2 439 331 68 37 chr5 35956143 35956466 -163673684 + LTR16A LTR ERVL 117 449 -1 2411 67 0 0 chr5 35956842 35957142 -163673008 - AluY SINE Alu -11 300 1 295 145 29 0 chr5 35957868 35957937 -163672213 + (TA)n Simple_repeat Simple_repeat 2 72 0 2019 102 0 11 chr5 35958097 35958405 -163671745 + AluSx SINE Alu 1 305 0 278 315 254 14 chr5 35958415 35958777 -163671373 + L3 LINE CR1 456 904 -673 234 157 29 14 chr5 35958778 35958848 -163671302 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 212 299 156 49 chr5 35958853 35959077 -163671073 + L3 LINE CR1 937 1184 -393 21 0 0 0 chr5 35959446 35959467 -163670683 + AT_rich Low_complexity Low_complexity 1 21 0 2402 77 0 3 chr5 35960824 35961134 -163669016 - AluSg SINE Alu -1 309 1 2365 92 0 25 chr5 35961982 35962299 -163667851 - AluSc SINE Alu 0 309 1 198 283 0 0 chr5 35964833 35964879 -163665271 + L2 LINE L2 3141 3186 -86 288 0 0 0 chr5 35965124 35965156 -163664994 + (TG)n Simple_repeat Simple_repeat 2 33 0 264 381 15 0 chr5 35965934 35966068 -163664082 - MIR SINE MIR -114 148 13 2038 80 83 0 chr5 35967045 35967333 -163662817 + AluSp SINE Alu 1 312 -1 919 226 116 81 chr5 35967958 35968117 -163662033 + MSTD LTR MaLR 1 153 -243 2165 126 3 0 chr5 35968117 35968418 -163661732 + AluSx SINE Alu 1 302 -10 919 226 116 81 chr5 35968418 35968630 -163661520 + MSTD LTR MaLR 153 385 -11 1509 271 31 35 chr5 35969431 35969952 -163660198 - LTR40a LTR ERVL 0 519 1 262 299 8 8 chr5 35970976 35971110 -163659040 + (TA)n Simple_repeat Simple_repeat 2 135 0 183 184 0 0 chr5 35971808 35971846 -163658304 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1949 122 3 11 chr5 35972431 35972718 -163657432 + AluSq SINE Alu 1 285 -28 279 223 0 0 chr5 35972718 35972830 -163657320 + (TA)n Simple_repeat Simple_repeat 1 112 0 903 121 57 0 chr5 35972903 35973024 -163657126 + AluSq/x SINE Alu 1 132 -180 189 74 0 0 chr5 35973024 35973051 -163657099 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 903 121 57 0 chr5 35973051 35973069 -163657081 + AluSq/x SINE Alu 132 148 -164 192 77 0 0 chr5 35973090 35973116 -163657034 + (A)n Simple_repeat Simple_repeat 1 26 0 34 0 0 0 chr5 35973246 35973280 -163656870 + AT_rich Low_complexity Low_complexity 1 34 0 237 308 96 19 chr5 35975140 35975244 -163654906 - MIR3 SINE MIR -31 177 66 282 268 71 16 chr5 35975706 35975833 -163654317 - L2 LINE L2 -1205 2109 1976 24 32 0 0 chr5 35976538 35976569 -163653581 + AT_rich Low_complexity Low_complexity 1 31 0 7835 33 0 0 chr5 35976723 35977660 -163652490 - L1PA4 LINE L1 -1819 4327 3391 8645 38 2 0 chr5 35977660 35979495 -163650655 + L1PA4 LINE L1 4304 6153 -2 1779 151 16 31 chr5 35980431 35980748 -163649402 - AluSx SINE Alu 0 312 1 1093 204 30 15 chr5 35980758 35981022 -163649128 + L1PA16 LINE L1 5881 6148 -18 1648 136 35 91 chr5 35982208 35982383 -163647767 + THE1C LTR MaLR 1 184 -191 2133 124 3 3 chr5 35982383 35982682 -163647468 - AluSq SINE Alu -14 299 1 1648 136 35 91 chr5 35982682 35982903 -163647247 + THE1C LTR MaLR 184 375 0 4169 118 72 58 chr5 35982903 35983675 -163646475 + THE1C-int LTR MaLR 1 783 -797 24 32 0 0 chr5 35983848 35983879 -163646271 + AT_rich Low_complexity Low_complexity 1 31 0 245 322 59 0 chr5 35984079 35984231 -163645919 - L1M4 LINE L1 -1721 4425 4265 338 299 28 33 chr5 35984448 35984662 -163645488 - L1M4 LINE L1 -2480 3666 3454 197 0 71 0 chr5 35984665 35984693 -163645457 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 948 173 0 0 chr5 35984695 35984845 -163645305 - AluJb SINE Alu -29 283 134 301 276 102 41 chr5 35985005 35985418 -163644732 - L1M4 LINE L1 -2853 3293 2856 16900 58 3 4 chr5 35985423 35988415 -163641735 - L1PA6 LINE L1 -6 6148 3157 1555 240 82 38 chr5 35988416 35989101 -163641049 - L1MC/D LINE L1 -568 5860 5137 307 313 73 8 chr5 35989227 35989486 -163640664 - L1MC/D LINE L1 -5039 1357 1082 23 33 0 0 chr5 35989641 35989671 -163640479 + AT_rich Low_complexity Low_complexity 1 30 0 25 65 0 0 chr5 35989715 35989761 -163640389 + AT_rich Low_complexity Low_complexity 1 46 0 1936 157 51 32 chr5 35989918 35990461 -163639689 + MLT2A2 LTR ERVL 3 554 0 599 277 110 16 chr5 35990477 35990764 -163639386 + MER57A LTR ERV1 102 403 0 1470 245 122 30 chr5 35991069 35991608 -163638542 + MLT1E LTR MaLR 5 593 0 207 0 0 0 chr5 35993451 35993474 -163636676 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 528 276 98 59 chr5 35993872 35994157 -163635993 + L1M4 LINE L1 4412 4685 -1461 2151 119 0 0 chr5 35994157 35994460 -163635690 + AluSx SINE Alu 2 304 -8 528 276 98 59 chr5 35994460 35995118 -163635032 + L1M4 LINE L1 4685 5391 -755 40 49 0 0 chr5 35995838 35995899 -163634251 + AT_rich Low_complexity Low_complexity 1 61 0 24 0 0 0 chr5 35996024 35996048 -163634102 + AT_rich Low_complexity Low_complexity 1 24 0 2429 45 0 0 chr5 35996296 35996587 -163633563 - AluY SINE Alu -20 291 1 23 33 0 0 chr5 35997451 35997481 -163632669 + AT_rich Low_complexity Low_complexity 1 30 0 26 82 0 0 chr5 35998971 35999032 -163631118 + AT_rich Low_complexity Low_complexity 1 61 0 36 53 0 0 chr5 36000017 36000074 -163630076 + AT_rich Low_complexity Low_complexity 1 57 0 1541 273 110 46 chr5 36000695 36001958 -163628192 + L1ME1 LINE L1 3783 5142 -1004 3718 48 0 0 chr5 36001974 36002434 -163627716 - L1PA4 LINE L1 -3 6152 5693 1635 70 0 0 chr5 36002434 36002647 -163627503 - L1P LINE L1 -5933 213 1 1002 230 111 19 chr5 36002703 36003151 -163626999 + L1ME1 LINE L1 5184 5674 -743 237 33 0 0 chr5 36003152 36003182 -163626968 + (CA)n Simple_repeat Simple_repeat 1 30 0 984 126 0 26 chr5 36003188 36003339 -163626811 + AluSq/x SINE Alu 1 147 -166 236 200 62 0 chr5 36003548 36003613 -163626537 + L1ME1 LINE L1 6079 6147 -19 1656 318 98 52 chr5 36004082 36005462 -163624688 - L2 LINE L2 -566 2748 1306 1546 271 31 35 chr5 36006196 36006738 -163623412 + MLT1F LTR MaLR 3 542 0 218 313 24 24 chr5 36007577 36007660 -163622490 - L2 LINE L2 0 3272 3190 287 264 126 78 chr5 36008142 36008184 -163621966 + MER5B DNA MER1_type 1 40 -138 570 206 188 6 chr5 36008184 36008344 -163621806 - MER5A DNA MER1_type 0 189 1 287 264 126 78 chr5 36008344 36008468 -163621682 + MER5B DNA MER1_type 40 175 -3 960 244 75 54 chr5 36008521 36008907 -163621243 + MLT2D LTR ERVL 1 394 -20 202 114 0 29 chr5 36008970 36009005 -163621145 + (CA)n Simple_repeat Simple_repeat 1 34 0 590 213 9 0 chr5 36009699 36009807 -163620343 + MLT1E2 LTR MaLR 438 546 -80 26 30 0 0 chr5 36010067 36010100 -163620050 + AT_rich Low_complexity Low_complexity 1 33 0 1869 99 179 13 chr5 36011102 36011414 -163618736 - THE1B LTR MaLR 0 364 1 9845 114 35 35 chr5 36011414 36012994 -163617156 - THE1B-int LTR MaLR 0 1580 1 2645 88 11 6 chr5 36012994 36013356 -163616794 - THE1B LTR MaLR 0 364 1 2860 230 44 13 chr5 36013675 36014458 -163615692 + L1MB7 LINE L1 5375 6175 -9 25 65 0 0 chr5 36015960 36016006 -163614144 + AT_rich Low_complexity Low_complexity 1 46 0 313 242 91 111 chr5 36016163 36016361 -163613789 + MLT1H LTR MaLR 141 334 -215 21 0 0 0 chr5 36017018 36017039 -163613111 + AT_rich Low_complexity Low_complexity 1 21 0 630 339 122 35 chr5 36017156 36018105 -163612045 - L2 LINE L2 -845 2469 1438 180 0 0 0 chr5 36019025 36019045 -163611105 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 25 51 0 0 chr5 36019157 36019196 -163610954 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr5 36019607 36019628 -163610522 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 36019813 36019838 -163610312 + AT_rich Low_complexity Low_complexity 1 25 0 689 312 23 0 chr5 36020045 36020256 -163609894 - MIR SINE MIR -8 254 40 2110 99 24 0 chr5 36020271 36020565 -163609585 - AluSq SINE Alu -12 301 1 2127 173 57 2 chr5 36020606 36021010 -163609140 + MSTB LTR MaLR 1 426 0 548 214 23 12 chr5 36021126 36021299 -163608851 + GA-rich Low_complexity Low_complexity 3 177 0 189 278 37 0 chr5 36021386 36021440 -163608710 - L2 LINE L2 -225 3047 2992 200 188 0 0 chr5 36021612 36021644 -163608506 + polypurine Low_complexity Low_complexity 4 35 0 5980 29 0 0 chr5 36021749 36022451 -163607699 - L1PA4 LINE L1 -8 6147 5446 354 288 144 6 chr5 36022899 36023059 -163607091 + MIR SINE MIR 32 213 -49 426 54 0 0 chr5 36024841 36024897 -163605253 + L1PA3 LINE L1 6097 6152 -3 25 0 0 0 chr5 36024897 36024922 -163605228 + AT_rich Low_complexity Low_complexity 1 25 0 1714 173 27 10 chr5 36025114 36025414 -163604736 - AluJb SINE Alu -7 305 1 1343 166 0 0 chr5 36025825 36026042 -163604108 + AluSq SINE Alu 78 294 -19 29 0 0 0 chr5 36026327 36026356 -163603794 + AT_rich Low_complexity Low_complexity 1 29 0 1276 120 0 0 chr5 36026617 36026817 -163603333 + L1PB1 LINE L1 1 200 -6663 10182 154 45 13 chr5 36026819 36030372 -163599778 + L1PB1 LINE L1 636 4445 -2417 1119 227 3 13 chr5 36030401 36030709 -163599441 - L1 LINE L1 -2726 3420 3116 7118 172 16 4 chr5 36030724 36033132 -163597018 + L1PB1 LINE L1 4427 6858 -9 183 369 57 16 chr5 36033238 36033360 -163596790 + MIR3 SINE MIR 79 205 -3 244 259 17 0 chr5 36034773 36034831 -163595319 + MIR SINE MIR 96 154 -108 10709 194 33 8 chr5 36035117 36037122 -163593028 + L1MA3 LINE L1 1 2057 -5508 5290 149 17 13 chr5 36037112 36037868 -163592282 + L1MA3 LINE L1 6319 7086 -638 * 2083 124 53 31 chr5 36037868 36038224 -163591926 - THE1B LTR MaLR 0 364 1 5290 149 17 13 chr5 36038224 36038690 -163591460 + L1MA3 LINE L1 7086 7549 -175 616 183 63 0 chr5 36039567 36039693 -163590457 - MER20 DNA MER1_type 0 219 86 923 267 33 28 chr5 36039693 36040052 -163590098 + MLT1A1 LTR MaLR 1 361 -4 916 247 4 38 chr5 36040063 36040326 -163589824 + MLT1A2 LTR MaLR 121 374 0 299 244 0 47 chr5 36040330 36040416 -163589734 - MER20 DNA MER1_type -135 84 3 180 291 38 25 chr5 36040637 36040716 -163589434 + L2 LINE L2 2777 2856 -458 318 167 0 0 chr5 36040898 36040952 -163589198 + MLT2D LTR ERVL 1 54 -360 206 216 0 0 chr5 36041034 36041071 -163589079 + (TG)n Simple_repeat Simple_repeat 2 38 0 321 189 0 27 chr5 36041142 36041216 -163588934 - L1MA4 LINE L1 -200 6100 6029 780 160 80 17 chr5 36041218 36041393 -163588757 + L1MA4 LINE L1 6114 6299 -1 347 281 116 18 chr5 36042272 36042436 -163587714 - MIR SINE MIR -13 249 70 312 330 10 0 chr5 36042508 36042608 -163587542 - MIR SINE MIR -10 252 152 27 29 0 0 chr5 36043246 36043280 -163586870 + AT_rich Low_complexity Low_complexity 1 34 0 1046 211 144 28 chr5 36044311 36044638 -163585512 - MLT1A1 LTR MaLR 0 365 1 2380 65 0 0 chr5 36045098 36045391 -163584759 - AluY SINE Alu -18 293 1 1959 98 8 0 chr5 36046579 36046844 -163583306 + AluSg SINE Alu 6 272 -38 216 0 0 0 chr5 36046846 36046870 -163583280 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 405 234 80 29 chr5 36046918 36047093 -163583057 + MER53 DNA DNA 3 186 -3 239 222 12 37 chr5 36047235 36047316 -163582834 + MER116 DNA Mariner 1 79 -1 359 296 101 12 chr5 36047489 36047658 -163582492 - MLT1C LTR MaLR 0 467 284 531 331 0 12 chr5 36047680 36047843 -163582307 - ERVL LTR ERVL -5210 554 394 4507 184 22 13 chr5 36047898 36049119 -163581031 + L1MA6 LINE L1 4977 6209 -91 288 145 49 8 chr5 36049100 36049181 -163580969 + L1MA7 LINE L1 6223 6312 0 * 1101 228 14 83 chr5 36049182 36049585 -163580565 + MLT1D-int LTR MaLR 1010 1728 -7 542 244 175 72 chr5 36049660 36050009 -163580141 + MLT1D LTR MaLR 118 502 -3 195 346 20 20 chr5 36051734 36051835 -163578315 - L3 LINE CR1 -729 848 748 468 116 45 80 chr5 36051837 36051949 -163578201 - L1MA5 LINE L1 0 6300 6193 27 29 0 0 chr5 36052381 36052415 -163577735 + AT_rich Low_complexity Low_complexity 1 34 0 719 299 48 0 chr5 36052430 36052637 -163577513 - MIR SINE MIR -44 218 2 277 278 11 22 chr5 36053958 36054048 -163576102 + (TATATG)n Simple_repeat Simple_repeat 6 94 0 22 0 0 0 chr5 36054051 36054073 -163576077 + AT_rich Low_complexity Low_complexity 1 22 0 834 152 0 14 chr5 36056479 36056624 -163573526 + FLAM_C SINE Alu 1 143 0 917 207 0 0 chr5 36056647 36056821 -163573329 + AluJb SINE Alu 122 295 -17 24 0 0 0 chr5 36056965 36056989 -163573161 + AT_rich Low_complexity Low_complexity 1 24 0 377 267 81 105 chr5 36057709 36057967 -163572183 + MIR SINE MIR 5 256 -6 6543 161 14 11 chr5 36058007 36059029 -163571121 - L1PA11 LINE L1 0 6174 5157 435 152 13 0 chr5 36059029 36059108 -163571042 - MADE1 DNA Mariner 0 80 1 6543 161 14 11 chr5 36059108 36060120 -163570030 - L1PA11 LINE L1 -1017 5157 4130 4266 181 12 21 chr5 36060120 36060970 -163569180 + L1P LINE L1 1889 2730 -3416 305 310 43 9 chr5 36061324 36061440 -163568710 - L2 LINE L2 0 3313 3194 275 328 148 55 chr5 36061432 36061998 -163568152 + L2 LINE L2 2673 3268 -4 * 24 53 0 0 chr5 36062187 36062225 -163567925 + AT_rich Low_complexity Low_complexity 1 38 0 474 88 0 0 chr5 36062284 36062352 -163567798 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 23 68 0 0 chr5 36063645 36063689 -163566461 + AT_rich Low_complexity Low_complexity 1 44 0 284 68 0 23 chr5 36063992 36064036 -163566114 + (TAGA)n Simple_repeat Simple_repeat 1 43 0 4069 196 21 14 chr5 36064479 36065343 -163564807 - L1MB1 LINE L1 -3 6165 5296 587 220 0 9 chr5 36065348 36065574 -163564576 + CT-rich Low_complexity Low_complexity 1 223 0 2564 254 21 12 chr5 36065578 36065958 -163564192 - L1MB1 LINE L1 -847 5299 4924 1793 128 33 4 chr5 36065958 36066264 -163563886 - AluSg SINE Alu 0 314 1 2564 254 21 12 chr5 36066264 36066627 -163563523 - L1MB1 LINE L1 -1222 4924 4548 1733 197 52 17 chr5 36066642 36067108 -163563042 + L1M4 LINE L1 4026 4507 -1639 353 215 43 0 chr5 36067109 36067202 -163562948 + L1M4 LINE L1 4444 4540 -1606 1689 92 5 0 chr5 36067231 36067449 -163562701 + AluSg/x SINE Alu 77 295 -17 1044 235 165 54 chr5 36068709 36069222 -163560928 + MLT1F1 LTR MaLR 3 567 0 21 0 0 0 chr5 36070832 36070853 -163559297 + AT_rich Low_complexity Low_complexity 1 21 0 215 265 0 0 chr5 36070959 36071008 -163559142 + (TA)n Simple_repeat Simple_repeat 1 49 0 2111 67 60 20 chr5 36071430 36071729 -163558421 + AluY SINE Alu 1 311 0 2336 46 13 3 chr5 36071868 36072173 -163557977 + L1PA5 LINE L1 5847 6154 0 232 314 66 8 chr5 36072828 36072949 -163557201 + L1MB3 LINE L1 101 228 -6314 27 0 0 0 chr5 36073367 36073394 -163556756 + AT_rich Low_complexity Low_complexity 1 27 0 193 366 204 0 chr5 36073512 36073605 -163556545 + L2 LINE L2 3142 3253 -19 292 202 0 48 chr5 36074072 36074156 -163555994 + L1MC4 LINE L1 6624 6703 -1339 3030 234 73 36 chr5 36074778 36075855 -163554295 + L1MB3 LINE L1 3891 5007 -1637 285 133 0 11 chr5 36075877 36075952 -163554198 + L1MB3 LINE L1 5788 5860 -809 2648 227 45 18 chr5 36075962 36076099 -163554051 + L1MB3 LINE L1 5971 6103 -578 2080 128 3 3 chr5 36076099 36076412 -163553738 + AluSq SINE Alu 1 313 0 2648 227 45 18 chr5 36076412 36076957 -163553193 + L1MB3 LINE L1 6103 6672 -9 226 136 51 0 chr5 36077216 36077275 -163552875 + (TAAA)n Simple_repeat Simple_repeat 4 65 0 423 0 0 0 chr5 36077947 36077994 -163552156 + (CA)n Simple_repeat Simple_repeat 2 48 0 23 78 0 0 chr5 36078729 36078780 -163551370 + AT_rich Low_complexity Low_complexity 1 51 0 25 65 0 0 chr5 36078824 36078870 -163551280 + AT_rich Low_complexity Low_complexity 1 46 0 238 355 32 8 chr5 36079014 36079138 -163551012 + L1M4 LINE L1 608 734 -5900 262 298 64 64 chr5 36079901 36080681 -163549469 + L1M4 LINE L1 1407 2229 -4596 26 88 0 0 chr5 36080863 36080931 -163549219 + AT_rich Low_complexity Low_complexity 1 68 0 563 302 76 44 chr5 36081192 36081811 -163548339 + L1M4 LINE L1 2764 3402 -3242 186 43 0 0 chr5 36082696 36082719 -163547431 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 23 0 0 0 chr5 36084250 36084273 -163545877 + AT_rich Low_complexity Low_complexity 1 23 0 447 19 0 0 chr5 36085363 36085415 -163544735 + (TG)n Simple_repeat Simple_repeat 1 52 0 2120 89 3 24 chr5 36086287 36086579 -163543571 + AluSg SINE Alu 1 286 -24 312 248 38 48 chr5 36087234 36087339 -163542811 - L1MC4 LINE L1 -1357 6685 6582 31 44 0 0 chr5 36087784 36087829 -163542321 + AT_rich Low_complexity Low_complexity 1 45 0 2225 107 0 3 chr5 36088294 36088594 -163541556 + AluSc SINE Alu 1 299 -10 3487 176 34 9 chr5 36088801 36089500 -163540650 - L1MC1 LINE L1 -1 6332 5616 23 0 0 0 chr5 36089581 36089604 -163540546 + AT_rich Low_complexity Low_complexity 1 23 0 264 357 48 16 chr5 36089994 36090120 -163540030 - MER5A DNA MER1_type -3 186 57 1377 207 48 88 chr5 36090130 36090507 -163539643 - MLT1A2 LTR MaLR -4 370 9 2030 148 0 0 chr5 36091629 36091933 -163538217 - AluSx SINE Alu -8 304 1 298 280 30 30 chr5 36092097 36092197 -163537953 + MER5A DNA MER1_type 83 182 -7 25 51 0 0 chr5 36092427 36092466 -163537684 + AT_rich Low_complexity Low_complexity 1 39 0 23 68 0 0 chr5 36093291 36093335 -163536815 + AT_rich Low_complexity Low_complexity 1 44 0 21 71 0 0 chr5 36093407 36093449 -163536701 + AT_rich Low_complexity Low_complexity 1 42 0 249 247 41 0 chr5 36093939 36094012 -163536138 + GA-rich Low_complexity Low_complexity 2 77 0 368 192 14 14 chr5 36094359 36094432 -163535718 - Tigger5 DNA MER2_type 0 2323 2251 840 201 193 4 chr5 36094650 36094899 -163535251 - L1MB1 LINE L1 -648 5664 5369 * 1513 158 32 13 chr5 36094898 36095272 -163534878 + L1MB1 LINE L1 5646 6168 0 577 309 65 86 chr5 36095871 36096347 -163533803 + MLT1H1 LTR MaLR 8 473 -82 204 219 0 0 chr5 36096477 36096518 -163533632 + CT-rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr5 36097177 36097200 -163532950 + AT_rich Low_complexity Low_complexity 1 23 0 1925 125 7 0 chr5 36097413 36097736 -163532414 - AluSq SINE Alu 0 325 1 272 288 68 17 chr5 36098080 36098198 -163531952 - LTR16A LTR ERVL -324 126 3 226 268 197 56 chr5 36098359 36098501 -163531649 - L2 LINE L2 0 3313 3152 380 260 10 30 chr5 36098745 36098845 -163531305 + L2 LINE L2 3168 3265 -48 1277 215 86 38 chr5 36098865 36099146 -163531004 - MLT1C LTR MaLR -29 438 129 1874 143 58 12 chr5 36099146 36099474 -163530676 + MER61A LTR ERV1 1 343 0 1277 215 86 38 chr5 36099474 36099610 -163530540 - MLT1C LTR MaLR -338 129 1 236 246 149 118 chr5 36100013 36100208 -163529942 - L2 LINE L2 0 3313 3113 1470 239 104 73 chr5 36100247 36101148 -163529002 - MER63C DNA MER1_type -1 929 1 1648 334 133 16 chr5 36101163 36101429 -163528721 - L2 LINE L2 -284 2988 2755 2000 138 39 30 chr5 36101429 36101790 -163528360 + THE1B LTR MaLR 1 364 0 1648 334 133 16 chr5 36101790 36102495 -163527655 - L2 LINE L2 -517 2755 1909 286 353 106 17 chr5 36102590 36102825 -163527325 - L2 LINE L2 -814 2500 2245 2074 129 0 16 chr5 36103353 36103670 -163526480 - AluSx SINE Alu 0 312 1 180 0 0 0 chr5 36103904 36103924 -163526226 + (TG)n Simple_repeat Simple_repeat 2 21 0 24 0 0 0 chr5 36105057 36105081 -163525069 + AT_rich Low_complexity Low_complexity 1 24 0 189 343 71 18 chr5 36105390 36105559 -163524591 + MIR SINE MIR 69 246 -16 27 87 0 0 chr5 36106890 36106959 -163523191 + AT_rich Low_complexity Low_complexity 1 69 0 1771 172 0 13 chr5 36107046 36107360 -163522790 - AluJb SINE Alu -2 310 1 554 296 73 29 chr5 36107748 36107954 -163522196 + MIR SINE MIR 12 226 -36 2234 109 3 3 chr5 36108083 36108396 -163521754 + AluSp SINE Alu 1 313 0 207 0 0 0 chr5 36109051 36109074 -163521076 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 203 267 17 0 chr5 36109106 36109166 -163520984 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 506 227 21 0 chr5 36109652 36109793 -163520357 - L1MA8 LINE L1 -3 6288 6145 30 83 0 0 chr5 36110023 36110095 -163520055 + AT_rich Low_complexity Low_complexity 1 72 0 463 137 32 0 chr5 36110530 36110625 -163519525 + CT-rich Low_complexity Low_complexity 3 100 0 508 207 0 9 chr5 36110629 36110745 -163519405 - L1MA8 LINE L1 -5 6286 6172 1369 221 57 90 chr5 36110900 36111376 -163518774 + MER31B LTR ERV1 1 460 -6 202 257 9 179 chr5 36111377 36111595 -163518555 + L2 LINE L2 3133 3313 0 521 347 85 28 chr5 36112036 36112388 -163517762 + L1M4c LINE L1 175 546 -5767 2249 77 10 22 chr5 36112418 36112731 -163517419 - AluY SINE Alu -2 309 1 1333 275 70 7 chr5 36113245 36113989 -163516161 + L1M4c LINE L1 1426 2322 -4060 * 8096 215 39 40 chr5 36113986 36117435 -163512715 + L1MA9 LINE L1 2850 6311 -1 643 336 34 0 chr5 36118330 36118565 -163511585 + MIR SINE MIR 10 252 -10 341 331 113 7 chr5 36118598 36118970 -163511180 - L2 LINE L2 -175 3138 2725 422 323 55 89 chr5 36119363 36119688 -163510462 - L2 LINE L2 -609 2705 2392 27 22 0 22 chr5 36119760 36119780 -163510370 + AT_rich Low_complexity Low_complexity 1 20 -24 2173 92 0 24 chr5 36119780 36120072 -163510078 - AluSg SINE Alu -25 285 1 27 22 0 22 chr5 36120072 36120096 -163510054 + AT_rich Low_complexity Low_complexity 20 44 0 2160 101 6 31 chr5 36120672 36120989 -163509161 + AluSc SINE Alu 1 309 0 1841 166 0 0 chr5 36121559 36121860 -163508290 + AluSx SINE Alu 1 301 -11 26 0 0 0 chr5 36124683 36124709 -163505441 + AT_rich Low_complexity Low_complexity 1 26 0 284 320 109 0 chr5 36125233 36125361 -163504789 + MIR SINE MIR 18 159 -103 29 84 0 0 chr5 36125510 36125581 -163504569 + AT_rich Low_complexity Low_complexity 1 71 0 514 99 0 12 chr5 36126538 36126619 -163503531 + MADE1 DNA Mariner 1 80 0 2137 193 92 43 chr5 36127837 36128580 -163501570 - LTR1B LTR ERV1 0 785 9 228 222 0 0 chr5 36128645 36128690 -163501460 + L1MC4 LINE L1 6662 6706 -1336 23 0 0 0 chr5 36128856 36128879 -163501271 + AT_rich Low_complexity Low_complexity 1 23 0 213 39 0 0 chr5 36129409 36129435 -163500715 + (T)n Simple_repeat Simple_repeat 1 26 0 210 118 0 0 chr5 36130275 36130309 -163499841 + (TC)n Simple_repeat Simple_repeat 2 35 0 23 0 0 0 chr5 36131710 36131733 -163498417 + AT_rich Low_complexity Low_complexity 1 23 0 1628 69 0 0 chr5 36132077 36132293 -163497857 - L1PA4 LINE L1 0 6155 5940 1967 26 0 0 chr5 36132293 36132527 -163497623 + L1PA4 LINE L1 5711 5944 -211 24 0 0 0 chr5 36132541 36132565 -163497585 + AT_rich Low_complexity Low_complexity 1 24 0 1519 212 16 43 chr5 36132962 36133334 -163496816 + MLT1A1 LTR MaLR 4 365 0 716 213 19 0 chr5 36134231 36134386 -163495764 + MLT1E2 LTR MaLR 468 625 -1 28 29 0 0 chr5 36134869 36134904 -163495246 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 36135031 36135056 -163495094 + AT_rich Low_complexity Low_complexity 1 25 0 184 294 35 71 chr5 36136039 36136124 -163494026 + L2 LINE L2 1398 1479 -1835 25 31 0 0 chr5 36137168 36137200 -163492950 + AT_rich Low_complexity Low_complexity 1 32 0 274 319 132 75 chr5 36137712 36138113 -163492037 + L3 LINE CR1 572 995 -582 398 331 23 12 chr5 36138115 36138287 -163491863 - MIR SINE MIR -3 259 86 210 315 19 37 chr5 36138269 36138377 -163491773 + L2 LINE L2 3199 3304 -9 * 26 0 0 0 chr5 36138483 36138509 -163491641 + AT_rich Low_complexity Low_complexity 1 26 0 1303 209 59 0 chr5 36139505 36139655 -163490495 - AluJo SINE Alu -22 290 150 381 22 0 0 chr5 36139655 36139701 -163490449 + (TTA)n Simple_repeat Simple_repeat 2 47 0 1303 209 59 0 chr5 36139701 36139823 -163490327 - AluJo SINE Alu -162 150 2 24 0 0 0 chr5 36140254 36140278 -163489872 + AT_rich Low_complexity Low_complexity 1 24 0 22 80 0 0 chr5 36140768 36140818 -163489332 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 36140853 36140874 -163489276 + AT_rich Low_complexity Low_complexity 1 21 0 276 30 0 0 chr5 36140922 36140955 -163489195 + (CA)n Simple_repeat Simple_repeat 2 34 0 383 107 27 70 chr5 36142528 36142715 -163487435 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 2127 112 7 0 chr5 36142719 36143006 -163487144 - AluSp SINE Alu -24 289 1 201 167 0 0 chr5 36143274 36143310 -163486840 + A-rich Low_complexity Low_complexity 5 40 0 365 259 0 24 chr5 36143331 36143416 -163486734 - MER5A DNA MER1_type -88 101 19 293 299 96 46 chr5 36143864 36144061 -163486089 - L2 LINE L2 -483 2831 2625 207 383 91 44 chr5 36144129 36144536 -163485614 - L2 LINE L2 -654 2660 2235 327 356 94 7 chr5 36145663 36145812 -163484338 + MIR SINE MIR 70 231 -31 473 316 37 16 chr5 36147166 36147356 -163482794 - MIR SINE MIR -55 207 14 6673 118 31 12 chr5 36148355 36149393 -163480757 - MER11C LTR ERVK -14 1057 1 1657 177 24 3 chr5 36149424 36149763 -163480387 + L1PA15 LINE L1 1985 2330 -4509 2144 219 88 55 chr5 36149799 36150502 -163479648 + MER50 LTR ERV1 9 734 0 2764 219 3 9 chr5 36150505 36151175 -163478975 + L1PA15 LINE L1 2371 3038 -3811 8851 221 47 14 chr5 36151236 36154822 -163475328 + L1PA15 LINE L1 3041 6865 -3 24 0 0 0 chr5 36154866 36154890 -163475260 + AT_rich Low_complexity Low_complexity 1 24 0 421 310 54 5 chr5 36155256 36155440 -163474710 - L1ME LINE L1 -297 5824 5632 893 233 184 75 chr5 36155481 36156151 -163473999 + LTR50 LTR ERVL 14 756 -39 180 0 0 0 chr5 36156515 36156535 -163473615 + (TCTA)n Simple_repeat Simple_repeat 1 20 0 27 49 0 0 chr5 36157730 36157771 -163472379 + AT_rich Low_complexity Low_complexity 1 41 0 28 61 0 37 chr5 36157837 36157919 -163472231 + AT_rich Low_complexity Low_complexity 1 79 0 232 280 54 101 chr5 36158613 36158781 -163471369 - MLT1J2 LTR MaLR -25 425 266 273 241 38 0 chr5 36159121 36159200 -163470950 + LTR33A LTR ERVL 395 476 -47 387 273 146 6 chr5 36159246 36159411 -163470739 - MLT1J2 LTR MaLR -242 208 21 23 40 0 0 chr5 36160228 36160253 -163469897 + AT_rich Low_complexity Low_complexity 1 25 0 10625 219 46 53 chr5 36160311 36163451 -163466699 + L1MA4A LINE L1 2 3121 -3727 329 145 16 0 chr5 36163451 36163513 -163466637 + (TA)n Simple_repeat Simple_repeat 2 64 0 10086 200 30 11 chr5 36163514 36166649 -163463501 + L1MA4A LINE L1 3497 6692 -313 2131 127 3 0 chr5 36167021 36167320 -163462830 + AluSx SINE Alu 1 300 -12 300 27 0 0 chr5 36168056 36168093 -163462057 + (TG)n Simple_repeat Simple_repeat 2 38 0 512 101 0 0 chr5 36168225 36168294 -163461856 + Alu SINE Alu 226 294 -16 330 26 0 0 chr5 36169632 36169671 -163460479 + (TG)n Simple_repeat Simple_repeat 2 40 0 403 123 0 0 chr5 36169672 36169729 -163460421 - AluS SINE Alu -14 286 230 1637 107 5 0 chr5 36169731 36169955 -163460195 + AluSg/x SINE Alu 71 295 -17 1125 70 0 7 chr5 36169957 36170100 -163460050 - AluY SINE Alu -169 142 1 22 80 0 0 chr5 36171940 36171990 -163458160 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 36172089 36172110 -163458040 + AT_rich Low_complexity Low_complexity 1 21 0 1343 177 51 102 chr5 36172831 36173019 -163457131 + MLT1A1 LTR MaLR 1 162 -203 444 19 0 0 chr5 36173019 36173072 -163457078 + (TG)n Simple_repeat Simple_repeat 2 54 0 1343 177 51 102 chr5 36173072 36173256 -163456894 + MLT1A1 LTR MaLR 162 354 -11 740 201 0 0 chr5 36173257 36173396 -163456754 + L1PB4 LINE L1 6010 6148 -8 560 233 17 0 chr5 36173708 36173828 -163456322 - MER7A DNA MER2_type -226 120 1 2907 103 2 0 chr5 36175146 36175545 -163454605 + MER84 LTR ERVI 1 400 -107 1963 110 4 4 chr5 36175545 36175826 -163454324 - AluSx SINE Alu -2 310 30 280 125 21 0 chr5 36175926 36175974 -163454176 + AluSc SINE Alu 177 225 -74 2732 129 73 10 chr5 36175974 36176455 -163453695 + MER9 LTR ERVK 1 511 0 4361 95 11 52 chr5 36176455 36177150 -163453000 + HERVK9 LTR ERVK 1 667 -5249 * 26387 95 4 0 chr5 36177146 36180694 -163449456 + HERVK9 LTR ERVK 1626 5186 -730 564 329 4 0 chr5 36180668 36180911 -163449239 + HERVK9 LTR ERVK 5975 6218 -1735 * 3308 102 2 2 chr5 36180896 36181348 -163448802 + HERVK9 LTR ERVK 5183 5634 -282 2022 146 2 0 chr5 36181403 36181726 -163448424 + HERVK9 LTR ERVK 4936 5916 0 2837 110 73 12 chr5 36181726 36182208 -163447942 + MER9 LTR ERVK 1 511 0 330 175 0 0 chr5 36182209 36182297 -163447853 + AluS SINE Alu 223 310 0 437 161 75 11 chr5 36182297 36182390 -163447760 + MER84 LTR ERVI 409 507 0 1968 148 10 0 chr5 36182547 36182851 -163447299 + AluSq SINE Alu 1 307 -6 545 181 21 7 chr5 36182857 36183001 -163447149 + GA-rich Low_complexity Low_complexity 3 148 0 2099 120 3 3 chr5 36183114 36183413 -163446737 + AluSx SINE Alu 1 299 -13 208 274 200 32 chr5 36183594 36183689 -163446461 - L2 LINE L2 -12 3301 3191 27 49 0 0 chr5 36183942 36183983 -163446167 + AT_rich Low_complexity Low_complexity 1 41 0 229 233 0 0 chr5 36184072 36184115 -163446035 - L1PB4 LINE L1 -1405 4741 4699 4246 180 40 41 chr5 36184117 36184654 -163445496 + L1PB4 LINE L1 4744 5280 -876 255 31 0 0 chr5 36184654 36184686 -163445464 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4246 180 40 41 chr5 36184686 36185567 -163444583 + L1PB4 LINE L1 5280 6156 0 244 263 97 18 chr5 36185860 36185974 -163444176 + L1MC4 LINE L1 6568 6690 -1352 270 119 102 17 chr5 36186652 36186711 -163443439 - L1MB7 LINE L1 -9 6175 6112 24 0 0 0 chr5 36187888 36187912 -163442238 + AT_rich Low_complexity Low_complexity 1 24 0 786 201 54 25 chr5 36187919 36188123 -163442027 + MER6B DNA MER2_type 1 210 0 186 43 0 0 chr5 36188143 36188166 -163441984 + (TTA)n Simple_repeat Simple_repeat 3 25 0 22 0 0 0 chr5 36188936 36188958 -163441192 + AT_rich Low_complexity Low_complexity 1 22 0 2037 129 0 13 chr5 36189077 36189380 -163440770 - AluSx SINE Alu -13 299 1 27 0 0 65 chr5 36189623 36189669 -163440481 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr5 36190112 36190133 -163440017 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 36192685 36192707 -163437443 + AT_rich Low_complexity Low_complexity 1 22 0 759 50 25 25 chr5 36193107 36193228 -163436922 + (GAAA)n Simple_repeat Simple_repeat 2 122 0 291 149 40 0 chr5 36193895 36193969 -163436181 + (ATATG)n Simple_repeat Simple_repeat 1 77 0 1987 138 0 22 chr5 36195303 36195615 -163434535 - AluSx SINE Alu -7 305 1 1573 124 24 121 chr5 36196212 36196551 -163433599 + AluYb8 SINE Alu 3 308 -10 2502 242 110 24 chr5 36196839 36196962 -163433188 + L1MD2 LINE L1 5497 5608 -751 2085 117 16 3 chr5 36196962 36197271 -163432879 - AluSq SINE Alu 0 313 1 2502 242 110 24 chr5 36197271 36197753 -163432397 + L1MD2 LINE L1 5608 6186 -173 321 100 0 0 chr5 36197753 36197803 -163432347 + (CA)n Simple_repeat Simple_repeat 1 50 0 2502 242 110 24 chr5 36197803 36197978 -163432172 + L1MD2 LINE L1 6186 6345 -14 2469 61 0 0 chr5 36198190 36198487 -163431663 - AluY SINE Alu -14 297 1 2097 129 3 0 chr5 36198749 36199051 -163431099 + AluSp SINE Alu 1 303 -10 1372 229 57 25 chr5 36200024 36200378 -163429772 + MLT1A1 LTR MaLR 1 365 0 2097 212 24 7 chr5 36200432 36200889 -163429261 + MLT1C LTR MaLR 1 465 -2 211 209 0 0 chr5 36203226 36203269 -163426881 + CT-rich Low_complexity Low_complexity 2 44 0 288 267 218 33 chr5 36203269 36203572 -163426578 + LTR33A LTR ERVL 165 523 0 2329 156 86 6 chr5 36203684 36204428 -163425722 - Tigger4(Zombi) DNA MER2_type 0 2731 1876 2189 84 0 7 chr5 36204428 36204713 -163425437 + AluY SINE Alu 1 283 -28 475 214 0 0 chr5 36204733 36204817 -163425333 - Tigger4(Zombi) DNA MER2_type -2647 84 1 1749 191 0 0 chr5 36205074 36205368 -163424782 + AluJb SINE Alu 7 300 -12 1266 174 19 63 chr5 36205433 36205703 -163424447 + AluJo SINE Alu 16 273 -39 496 180 0 0 chr5 36205703 36205792 -163424358 + AluJ/FRAM SINE Alu 222 310 -2 3023 162 10 4 chr5 36205854 36206347 -163423803 + LTR28-int LTR ERV1 6595 7090 -1 4400 203 83 21 chr5 36206348 36207308 -163422842 + LTR28 LTR ERV1 1 1020 0 357 213 64 21 chr5 36208161 36208255 -163421895 - MLT1J2 LTR MaLR -24 426 329 2461 60 3 0 chr5 36208657 36208955 -163421195 - AluY SINE Alu -12 299 1 932 143 116 37 chr5 36209454 36209643 -163420507 + AluJb SINE Alu 86 289 -23 21 0 0 0 chr5 36211431 36211452 -163418698 + AT_rich Low_complexity Low_complexity 1 21 0 1171 141 5 28 chr5 36211963 36212176 -163417974 + L1PA12 LINE L1 5961 6168 0 310 338 56 15 chr5 36212497 36212695 -163417455 + MLT1H LTR MaLR 153 358 -191 307 281 11 11 chr5 36214375 36214464 -163415686 - L1MC4 LINE L1 -1340 6702 6614 241 244 0 44 chr5 36214499 36214589 -163415561 - L1MC4 LINE L1 -1339 6703 6618 288 0 0 0 chr5 36214591 36214623 -163415527 + (CA)n Simple_repeat Simple_repeat 1 32 0 946 203 57 33 chr5 36215024 36215236 -163414914 + MER20 DNA MER1_type 1 217 -2 210 208 0 0 chr5 36215644 36215697 -163414453 + (CA)n Simple_repeat Simple_repeat 2 54 0 210 37 0 0 chr5 36215995 36216022 -163414128 + (TC)n Simple_repeat Simple_repeat 1 27 0 607 312 28 37 chr5 36216641 36216859 -163413291 - MER58A DNA MER1_type -8 216 1 2116 127 0 6 chr5 36216899 36217213 -163412937 + AluSx SINE Alu 1 312 0 333 0 0 0 chr5 36217765 36217802 -163412348 + (CA)n Simple_repeat Simple_repeat 2 38 0 305 307 57 26 chr5 36218102 36218294 -163411856 - L1MEc LINE L1 -4929 1467 1270 258 105 0 0 chr5 36219170 36219208 -163410942 + (TA)n Simple_repeat Simple_repeat 2 39 0 310 333 77 16 chr5 36219532 36219715 -163410435 + MIR SINE MIR 23 216 -46 23 54 0 0 chr5 36220727 36220764 -163409386 + AT_rich Low_complexity Low_complexity 1 37 0 2458 46 0 16 chr5 36221088 36221395 -163408755 + AluY SINE Alu 1 302 -9 26 30 0 0 chr5 36222581 36222614 -163407536 + AT_rich Low_complexity Low_complexity 1 33 0 180 176 0 0 chr5 36222712 36222746 -163407404 + (TA)n Simple_repeat Simple_repeat 2 35 0 26 50 0 0 chr5 36223057 36223097 -163407053 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr5 36225044 36225075 -163405075 + AT_rich Low_complexity Low_complexity 1 31 0 1267 247 29 14 chr5 36225082 36225430 -163404720 + L1PBa LINE L1 8 360 -6503 9726 198 71 15 chr5 36225491 36228638 -163401512 + L1PBa LINE L1 620 4057 -2805 378 57 38 0 chr5 36228648 36228701 -163401449 - MLT2A2 LTR ERVL 0 453 399 253 246 0 0 chr5 36228669 36228734 -163401416 - LTR66 LTR ERVL -152 458 394 * 336 227 31 52 chr5 36228734 36228831 -163401319 - L1MC4 LINE L1 -1339 6703 6609 24 32 0 0 chr5 36228837 36228868 -163401282 + AT_rich Low_complexity Low_complexity 1 31 0 2873 89 20 5 chr5 36228888 36229282 -163400868 - MLT2A1 LTR ERVL -44 400 1 41476 87 13 5 chr5 36229282 36234829 -163395321 - HERVL-A1 LTR ERVL 0 5654 63 7116 52 3 9 chr5 36234832 36236513 -163393637 + L1PA6 LINE L1 4470 6144 -10 1254 343 49 10 chr5 36236522 36237117 -163393033 - L2 LINE L2 -690 2624 2007 2079 92 0 83 chr5 36237129 36237454 -163392696 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr5 36237690 36237711 -163392439 + AT_rich Low_complexity Low_complexity 1 21 0 292 202 0 48 chr5 36237889 36237973 -163392177 - L1MC4 LINE L1 -1339 6703 6624 193 366 204 0 chr5 36238440 36238533 -163391617 - L2 LINE L2 -19 3253 3142 27 0 0 0 chr5 36238651 36238678 -163391472 + AT_rich Low_complexity Low_complexity 1 27 0 2128 118 3 0 chr5 36239144 36239441 -163390709 - AluSx SINE Alu -14 298 1 285 350 72 46 chr5 36239543 36239892 -163390258 + L2 LINE L2 2419 2776 -538 45 34 0 0 chr5 36240263 36240322 -163389828 + AT_rich Low_complexity Low_complexity 1 59 0 242 295 48 24 chr5 36240441 36240607 -163389543 + L1MEc LINE L1 1810 1979 -4417 395 288 39 27 chr5 36240720 36240979 -163389171 + L1MEc LINE L1 1958 2267 -3988 2776 255 28 77 chr5 36240989 36242080 -163388070 + L1ME2 LINE L1 321 1357 -5498 2081 266 48 6 chr5 36242082 36242828 -163387322 + L1ME2 LINE L1 1558 2326 -4633 1150 235 86 12 chr5 36242840 36243451 -163386699 + L1ME2 LINE L1 5780 6426 -569 541 266 107 19 chr5 36243477 36243748 -163386402 + L1M4 LINE L1 4590 4884 -1262 494 234 48 125 chr5 36243932 36244180 -163385970 + MLT1F1-int LTR MaLR 972 1200 -171 294 270 61 9 chr5 36244282 36244397 -163385753 + MLT1F1-int LTR MaLR 1249 1369 -2 1449 214 75 77 chr5 36244401 36244936 -163385214 + MLT1F1 LTR MaLR 3 538 -29 385 283 35 14 chr5 36244959 36245104 -163385046 + L1ME2 LINE L1 6659 6806 -169 1314 199 124 68 chr5 36245471 36245883 -163384267 + MLT1D LTR MaLR 21 455 -50 408 311 38 8 chr5 36245934 36246066 -163384084 - MIR SINE MIR -108 154 19 276 241 52 17 chr5 36247333 36247507 -163382643 + (TA)n Simple_repeat Simple_repeat 1 180 0 784 289 31 22 chr5 36247956 36248181 -163381969 - MIR SINE MIR -8 254 28 654 210 6 12 chr5 36248753 36248915 -163381235 - L1P LINE L1 -918 5228 5068 6838 201 16 18 chr5 36248946 36251063 -163379087 - L1PA15 LINE L1 -45 6120 4010 2139 116 0 3 chr5 36251063 36251355 -163378795 - AluSx SINE Alu -21 291 1 6838 201 16 18 chr5 36251355 36251666 -163378484 - L1PA15 LINE L1 -2155 4010 3700 207 69 0 0 chr5 36251670 36251699 -163378451 + (TTG)n Simple_repeat Simple_repeat 1 29 0 306 210 16 0 chr5 36251799 36251861 -163378289 + AluJ/FRAM SINE Alu 218 280 -22 260 26 0 26 chr5 36251863 36251901 -163378249 + (TTAAA)n Simple_repeat Simple_repeat 3 39 0 738 210 53 84 chr5 36251945 36251994 -163378156 + MLT1A1 LTR MaLR 112 161 -204 1425 197 44 0 chr5 36251994 36252289 -163377861 + AluSx SINE Alu 5 312 0 738 210 53 84 chr5 36252289 36252501 -163377649 + MLT1A1 LTR MaLR 161 365 0 1714 171 57 84 chr5 36252738 36253178 -163376972 - MSTA LTR MaLR 0 428 1 317 274 65 81 chr5 36253484 36253670 -163376480 + L1MEd LINE L1 833 1015 -5104 2105 126 0 0 chr5 36254460 36254753 -163375397 + AluSq SINE Alu 13 305 -8 620 296 38 10 chr5 36255268 36255559 -163374591 + L1MEd LINE L1 3197 3495 -2634 702 306 37 33 chr5 36255560 36256014 -163374136 + L1MEd LINE L1 3881 4336 -1793 21 36 0 0 chr5 36256494 36256522 -163373628 + AT_rich Low_complexity Low_complexity 1 28 0 295 318 85 8 chr5 36256538 36256667 -163373483 - MIR SINE MIR -77 185 47 284 308 26 0 chr5 36257102 36257180 -163372970 - MLT1J LTR MaLR -317 194 115 21 36 0 0 chr5 36259021 36259049 -163371101 + AT_rich Low_complexity Low_complexity 1 28 0 1710 154 58 28 chr5 36259529 36259893 -163370257 - THE1C LTR MaLR 0 375 1 280 344 45 25 chr5 36260051 36260208 -163369942 + MIR SINE MIR 11 170 -92 195 321 54 62 chr5 36260657 36260769 -163369381 + MIR SINE MIR 5 115 -147 268 248 248 0 chr5 36261363 36261464 -163368686 - MIR SINE MIR -13 249 124 1800 213 67 32 chr5 36262181 36262645 -163367505 + MER4E LTR ERV1 300 779 0 181 273 18 0 chr5 36262647 36262702 -163367448 + L2 LINE L2 3258 3313 0 210 174 0 43 chr5 36262774 36262820 -163367330 + L2 LINE L2 3257 3300 -13 2369 97 0 3 chr5 36262821 36263130 -163367020 + AluSp SINE Alu 1 308 -5 405 0 0 0 chr5 36263130 36263175 -163366975 + (TA)n Simple_repeat Simple_repeat 1 45 0 1745 111 12 4 chr5 36264657 36264909 -163365241 + AluSg SINE Alu 40 293 -17 279 161 0 0 chr5 36265256 36265312 -163364838 + (TA)n Simple_repeat Simple_repeat 1 56 0 258 369 34 13 chr5 36266237 36266386 -163363764 - L2 LINE L2 -941 2373 2222 441 0 0 0 chr5 36266559 36266608 -163363542 + (CA)n Simple_repeat Simple_repeat 2 50 0 2322 248 32 13 chr5 36267269 36267793 -163362357 + MLT2B3 LTR ERVL 1 534 -20 24 53 0 0 chr5 36269222 36269260 -163360890 + AT_rich Low_complexity Low_complexity 1 38 0 1390 234 132 55 chr5 36269375 36269845 -163360305 + MLT2B2 LTR ERVL 2 507 -8 1623 313 47 26 chr5 36270014 36270548 -163359602 + L1MDb LINE L1 7 551 -5858 3628 253 85 24 chr5 36270631 36272494 -163357656 + L1MDb LINE L1 668 2672 -3893 1571 275 66 48 chr5 36272483 36273268 -163356882 + L1M4 LINE L1 4075 4873 -1273 * 977 249 17 48 chr5 36273268 36273621 -163356529 + L1MD2 LINE L1 6016 6357 -2 22 56 0 0 chr5 36273967 36274003 -163356147 + AT_rich Low_complexity Low_complexity 1 36 0 761 231 6 0 chr5 36274145 36274305 -163355845 - L1MA10 LINE L1 -492 5820 5660 2002 191 47 61 chr5 36274305 36274652 -163355498 + L1MA10 LINE L1 5833 6172 -162 335 23 23 0 chr5 36274652 36274696 -163355454 + (CA)n Simple_repeat Simple_repeat 2 46 0 2002 191 47 61 chr5 36274696 36274857 -163355293 + L1MA10 LINE L1 6172 6334 0 233 259 89 54 chr5 36275124 36275236 -163354914 + HAL1 LINE L1 4 119 -2388 1412 165 31 4 chr5 36276076 36276330 -163353820 + AluSx SINE Alu 26 286 -26 440 285 34 50 chr5 36276644 36276823 -163353327 - MER5B DNA MER1_type 0 178 3 24 32 0 0 chr5 36277672 36277703 -163352447 + AT_rich Low_complexity Low_complexity 1 31 0 204 97 0 0 chr5 36277804 36277835 -163352315 + (TG)n Simple_repeat Simple_repeat 2 32 0 242 327 40 10 chr5 36278206 36278307 -163351843 + LTR67 LTR ERVL 440 543 -14 655 232 116 26 chr5 36278581 36278771 -163351379 - MER3 DNA MER1_type -2 207 1 2496 59 0 0 chr5 36279054 36279358 -163350792 + AluY SINE Alu 1 304 -7 1238 87 0 0 chr5 36279358 36279556 -163350594 + AluY SINE Alu 124 321 0 1568 183 3 11 chr5 36280167 36280452 -163349698 - AluJb SINE Alu -19 293 11 1068 157 81 157 chr5 36282090 36282337 -163347813 - MER7A DNA MER2_type -2733 305 90 1280 120 37 5 chr5 36282337 36282554 -163347596 + L1PA10 LINE L1 5944 6167 -1 1068 157 81 157 chr5 36282554 36282638 -163347512 - MER7A DNA MER2_type -2948 90 1 254 286 0 71 chr5 36283117 36283215 -163346935 + L2 LINE L2 3182 3272 0 225 151 0 0 chr5 36283502 36283555 -163346595 + A-rich Low_complexity Low_complexity 1 53 0 2150 117 0 19 chr5 36283761 36284077 -163346073 + AluSq SINE Alu 3 312 -1 22 0 0 0 chr5 36284234 36284256 -163345894 + AT_rich Low_complexity Low_complexity 1 22 0 403 316 100 60 chr5 36284305 36284651 -163345499 + L1MEd LINE L1 19 389 -5730 758 69 0 0 chr5 36284651 36284752 -163345398 + L1PA5 LINE L1 6049 6149 -5 403 316 100 60 chr5 36284752 36284857 -163345293 + L1MEd LINE L1 389 488 -5631 2077 113 0 3 chr5 36285262 36285587 -163344563 + AluSx SINE Alu 1 324 0 28 86 0 0 chr5 36285796 36285866 -163344284 + AT_rich Low_complexity Low_complexity 1 70 0 1961 162 0 0 chr5 36285955 36286433 -163343717 + AluSx SINE Alu 1 478 0 1332 246 22 33 chr5 36286434 36286796 -163343354 + MLT1B LTR MaLR 33 390 0 4480 70 50 2 chr5 36287886 36288488 -163341662 + L1PA7 LINE L1 5519 6149 -5 25 0 0 0 chr5 36289252 36289277 -163340873 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 36289310 36289335 -163340815 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 36289370 36289400 -163340750 + AT_rich Low_complexity Low_complexity 1 30 0 633 218 5 17 chr5 36289612 36289762 -163340388 - MER20 DNA MER1_type -5 214 65 280 241 17 0 chr5 36289978 36290036 -163340114 - MER20 DNA MER1_type -152 67 9 315 49 0 0 chr5 36290046 36290087 -163340063 + (CA)n Simple_repeat Simple_repeat 2 42 0 28 0 0 0 chr5 36291909 36291937 -163338213 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 36292079 36292105 -163338045 + AT_rich Low_complexity Low_complexity 1 26 0 936 306 39 29 chr5 36292190 36292677 -163337473 + L1MC/D LINE L1 5262 5753 -2055 1262 266 24 3 chr5 36292979 36293313 -163336837 - MER58B DNA MER1_type 0 341 1 273 208 19 0 chr5 36293806 36293859 -163336291 - Tigger3(Golem) DNA MER2_type -2974 55 2 185 180 20 0 chr5 36294053 36294103 -163336047 + (TA)n Simple_repeat Simple_repeat 1 51 0 5085 265 58 63 chr5 36294343 36297412 -163332738 + L1PA13 LINE L1 2 3073 -3724 7722 76 6 20 chr5 36297451 36298524 -163331626 - MER11C LTR ERVK -14 1057 1 1449 289 14 2 chr5 36298524 36299011 -163331139 + L1 LINE L1 3068 3560 -3237 21 0 0 0 chr5 36299051 36299072 -163331078 + AT_rich Low_complexity Low_complexity 1 21 0 510 317 30 15 chr5 36299198 36299466 -163330684 + L1PA12 LINE L1 11 282 -7299 6174 245 27 20 chr5 36300664 36303081 -163327069 + L1PA12 LINE L1 2328 4772 -2812 4862 154 25 8 chr5 36303186 36304037 -163326113 + L1PA16 LINE L1 5293 6157 -9 14150 135 10 7 chr5 36304336 36306642 -163323508 - L1P LINE L1 -1032 5114 2802 4336 72 48 0 chr5 36306640 36307226 -163322924 + L1PA8A LINE L1 5490 6103 -28 * 25 0 0 0 chr5 36307911 36307936 -163322214 + AT_rich Low_complexity Low_complexity 1 25 0 2928 91 0 0 chr5 36308028 36308629 -163321521 - L1PA7 LINE L1 -589 5565 4965 4338 58 19 10 chr5 36308629 36309196 -163320954 + L1PA7 LINE L1 5566 6154 0 21 0 0 0 chr5 36309263 36309284 -163320866 + AT_rich Low_complexity Low_complexity 1 21 0 2104 86 3 58 chr5 36311749 36312074 -163318076 + AluY SINE Alu 1 307 -4 2043 143 3 0 chr5 36312193 36312500 -163317650 + AluSq SINE Alu 1 308 -5 251 378 45 19 chr5 36313107 36313263 -163316887 + MIR3 SINE MIR 23 182 -26 34 24 0 0 chr5 36313268 36313309 -163316841 + AT_rich Low_complexity Low_complexity 1 41 0 2115 158 11 13 chr5 36314018 36314392 -163315758 + THE1C LTR MaLR 3 375 0 8403 137 51 53 chr5 36314400 36315974 -163314176 + THE1C-int LTR MaLR 10 1580 0 1869 176 24 21 chr5 36315974 36316348 -163313802 + THE1C LTR MaLR 1 375 0 2382 279 66 28 chr5 36316974 36318264 -163311886 - L1 LINE L1 -3190 2780 1431 956 269 26 4 chr5 36318264 36318498 -163311652 - MER8 DNA MER2_type 0 239 1 2382 279 66 28 chr5 36318498 36319542 -163310608 - L1 LINE L1 -4539 1431 428 322 307 20 47 chr5 36319714 36319864 -163310286 - L1 LINE L1 -5497 394 249 894 324 30 30 chr5 36319969 36320336 -163309814 - L1 LINE L1 -5524 367 1 474 302 42 37 chr5 36320336 36320551 -163309599 - L2 LINE L2 -529 2785 2570 327 148 46 28 chr5 36320639 36320747 -163309403 + (TA)n Simple_repeat Simple_repeat 1 110 0 336 327 67 22 chr5 36320921 36321233 -163308917 - L2 LINE L2 -1005 2309 1984 306 333 0 0 chr5 36321356 36321446 -163308704 + L1MC4 LINE L1 6614 6703 -1339 301 303 0 0 chr5 36321400 36321489 -163308661 - L1MC4 LINE L1 -1339 6703 6615 * 182 180 16 0 chr5 36323058 36323119 -163307031 + A-rich Low_complexity Low_complexity 3 64 0 240 35 0 0 chr5 36323421 36323450 -163306700 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 258 61 98 chr5 36323848 36323980 -163306170 + MIR SINE MIR 28 154 -108 1072 248 33 51 chr5 36324749 36325144 -163305006 - MLT1B LTR MaLR 0 390 3 545 326 53 28 chr5 36325820 36326105 -163304045 + L1MC4a LINE L1 5364 5655 -2153 255 291 227 0 chr5 36326295 36326436 -163303714 + L1MC4a LINE L1 5748 5920 -1888 26 30 0 0 chr5 36326436 36326469 -163303681 + AT_rich Low_complexity Low_complexity 1 33 0 1536 138 10 51 chr5 36326470 36326781 -163303369 - L1MA3 LINE L1 -208 6097 5800 183 298 0 0 chr5 36326950 36326997 -163303153 - L3 LINE CR1 -4 1573 1527 537 271 53 0 chr5 36327842 36327975 -163302175 + MER5A DNA MER1_type 27 166 -23 1342 240 80 15 chr5 36328219 36328556 -163301594 + MLT1B LTR MaLR 32 390 0 1683 167 3 37 chr5 36328623 36328946 -163301204 + AluJo SINE Alu 1 312 0 313 329 56 12 chr5 36329028 36329189 -163300961 + MIR SINE MIR 66 233 -29 1190 140 78 26 chr5 36329782 36330080 -163300070 - MER4E LTR ERV1 -141 638 273 587 207 6 55 chr5 36330654 36330773 -163299377 - L1MA10 LINE L1 -7 6327 6217 4571 141 89 6 chr5 36330773 36331604 -163298546 + MER4D LTR ERV1 1 900 -3 587 207 6 55 chr5 36331604 36331648 -163298502 - L1MA10 LINE L1 -117 6217 6172 360 0 0 0 chr5 36331671 36331711 -163298439 + (TG)n Simple_repeat Simple_repeat 2 41 0 204 255 0 0 chr5 36332086 36332133 -163298017 + T-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr5 36332393 36332414 -163297736 + AT_rich Low_complexity Low_complexity 1 21 0 1029 319 143 31 chr5 36332994 36333744 -163296406 - L2 LINE L2 -337 2977 2144 1731 223 53 65 chr5 36334496 36335047 -163295103 - MER74A LTR ERVL -14 544 1 332 346 129 38 chr5 36335047 36335310 -163294840 - MER45C DNA AcHobo -333 620 334 580 303 52 58 chr5 36335369 36335583 -163294567 - MER45C DNA AcHobo -606 347 134 5565 25 0 3 chr5 36335583 36336234 -163293916 + L1PA3 LINE L1 5507 6155 0 580 303 52 58 chr5 36336234 36336349 -163293801 - MER45C DNA AcHobo -819 134 20 219 320 0 13 chr5 36336909 36336987 -163293163 + MIR SINE MIR 169 245 -17 2216 97 0 0 chr5 36338506 36338794 -163291356 + AluSg1 SINE Alu 1 288 -21 2152 103 78 6 chr5 36339455 36339803 -163290347 + THE1C LTR MaLR 1 373 -2 393 324 139 6 chr5 36342620 36342793 -163287357 - MIR SINE MIR -5 257 62 614 304 88 5 chr5 36343300 36343504 -163286646 - MLT1J2 LTR MaLR -131 319 99 1036 230 62 60 chr5 36343944 36344473 -163285677 + MLT1E LTR MaLR 51 593 0 23 0 0 0 chr5 36345084 36345107 -163285043 + AT_rich Low_complexity Low_complexity 1 23 0 2127 108 3 3 chr5 36345307 36345604 -163284546 - AluSx SINE Alu -15 297 1 327 309 43 25 chr5 36345683 36345845 -163284305 + Charlie8 DNA MER1_type 7 171 -2246 334 261 304 0 chr5 36346613 36346751 -163283399 - MER5A DNA MER1_type -9 180 1 609 92 0 0 chr5 36347052 36347150 -163283000 + (TAGA)n Simple_repeat Simple_repeat 4 101 0 21 36 0 0 chr5 36347255 36347283 -163282867 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 36347509 36347532 -163282618 + AT_rich Low_complexity Low_complexity 1 23 0 818 289 150 11 chr5 36348434 36348794 -163281356 + MLT1J2 LTR MaLR 4 413 -37 268 309 15 0 chr5 36349561 36349629 -163280521 + MIR SINE MIR 194 262 0 283 370 11 54 chr5 36350221 36350405 -163279745 - MIR SINE MIR -21 241 66 26 30 0 0 chr5 36350690 36350723 -163279427 + AT_rich Low_complexity Low_complexity 1 33 0 198 341 23 23 chr5 36351111 36351199 -163278951 + MIR SINE MIR 52 139 -123 834 239 60 98 chr5 36352821 36353168 -163276982 + LTR37B LTR ERV1 6 334 -134 2080 127 10 0 chr5 36353168 36353467 -163276683 - AluSq SINE Alu -11 302 1 834 239 60 98 chr5 36353467 36353570 -163276580 + LTR37B LTR ERV1 334 439 -29 304 333 26 17 chr5 36354771 36354888 -163275262 + MER5A DNA MER1_type 63 180 -9 459 349 26 5 chr5 36356783 36356975 -163273175 + MIR SINE MIR 6 201 -61 932 174 0 13 chr5 36357243 36357398 -163272752 - AluJo SINE Alu -33 279 127 951 173 106 16 chr5 36357398 36357652 -163272498 + Charlie1 DNA MER1_type 2485 2761 0 347 328 49 16 chr5 36358284 36358467 -163271683 - L1ME3A LINE L1 -4 6166 5978 477 304 29 42 chr5 36358484 36358796 -163271354 - L1ME3A LINE L1 -238 5932 5625 180 97 0 0 chr5 36358801 36358832 -163271318 + (T)n Simple_repeat Simple_repeat 1 31 0 1361 276 62 74 chr5 36358930 36359235 -163270915 - L1ME3A LINE L1 -825 5321 5014 1350 221 3 13 chr5 36359235 36359533 -163270617 - AluJo SINE Alu -15 297 3 1361 276 62 74 chr5 36359533 36360532 -163269618 - L1ME3A LINE L1 -1132 5014 4032 1657 198 21 3 chr5 36360582 36360910 -163269240 + MER2 DNA MER2_type 7 340 -5 281 343 84 3 chr5 36360911 36361208 -163268942 - L1ME3A LINE L1 -2167 3979 3659 21 0 0 0 chr5 36361387 36361408 -163268742 + AT_rich Low_complexity Low_complexity 1 21 0 1595 210 121 7 chr5 36361658 36362111 -163268039 - MLT1D LTR MaLR 0 505 1 1601 103 0 0 chr5 36362260 36362473 -163267677 - AluSg/x SINE Alu -14 296 84 204 312 128 43 chr5 36363242 36363383 -163266767 + L3 LINE CR1 1416 1568 -9 805 234 83 40 chr5 36364162 36364620 -163265530 + MLT1F1 LTR MaLR 7 549 -18 779 200 25 15 chr5 36364620 36364820 -163265330 + MLT1A1 LTR MaLR 1 202 -163 235 252 14 0 chr5 36365059 36365202 -163264948 + (TA)n Simple_repeat Simple_repeat 1 145 0 360 125 0 0 chr5 36365210 36365272 -163264878 + MLT2B3 LTR ERVL 403 554 0 181 309 0 0 chr5 36365342 36365384 -163264766 - MIR SINE MIR -218 44 3 235 307 0 0 chr5 36365667 36365755 -163264395 - L1MC4 LINE L1 -1340 6702 6615 252 177 0 97 chr5 36365778 36365840 -163264310 + MLT2B1 LTR ERVL 465 520 0 591 195 9 18 chr5 36366227 36366340 -163263810 - MER45 DNA AcHobo -1468 113 2 241 389 50 27 chr5 36366898 36367158 -163262992 - L2 LINE L2 -840 2474 2209 255 289 0 24 chr5 36367240 36367323 -163262827 + GA-rich Low_complexity Low_complexity 2 82 0 221 0 35 0 chr5 36368448 36368477 -163261673 + (GAA)n Simple_repeat Simple_repeat 2 31 0 44 63 0 0 chr5 36368856 36368935 -163261215 + AT_rich Low_complexity Low_complexity 1 79 0 37 0 0 0 chr5 36369087 36369124 -163261026 + AT_rich Low_complexity Low_complexity 1 37 0 26 30 0 0 chr5 36369133 36369166 -163260984 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 36369428 36369449 -163260701 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 36369498 36369520 -163260630 + (T)n Simple_repeat Simple_repeat 1 22 0 1889 141 20 0 chr5 36369872 36370209 -163259941 + AluSx SINE Alu 1 343 0 520 126 0 29 chr5 36370210 36370313 -163259837 + (GGGAA)n Simple_repeat Simple_repeat 5 104 0 315 239 0 0 chr5 36370767 36370834 -163259316 + MLT1A1 LTR MaLR 296 362 -3 195 42 0 0 chr5 36371142 36371166 -163258984 + (TC)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr5 36372097 36372120 -163258030 + AT_rich Low_complexity Low_complexity 1 23 0 2126 260 29 94 chr5 36373567 36374416 -163255734 + MER21B LTR ERV1 13 806 -57 2221 107 0 0 chr5 36375325 36375625 -163254525 - AluSg SINE Alu -10 300 1 252 0 0 0 chr5 36375707 36375735 -163254415 + (CA)n Simple_repeat Simple_repeat 1 28 0 719 126 42 21 chr5 36376104 36376247 -163253903 - L1MA9 LINE L1 -6 6306 6161 2258 69 3 50 chr5 36376515 36376832 -163253318 + AluY SINE Alu 4 305 -6 285 372 122 21 chr5 36377762 36378187 -163251963 + L3 LINE CR1 584 1051 -526 243 218 0 0 chr5 36378405 36378460 -163251690 + (TA)n Simple_repeat Simple_repeat 1 55 0 375 23 0 0 chr5 36378460 36378504 -163251646 + (CA)n Simple_repeat Simple_repeat 2 45 0 1554 148 41 0 chr5 36378511 36378781 -163251369 + Tigger3(Golem) DNA MER2_type 2148 2428 -601 263 340 0 0 chr5 36378883 36378989 -163251161 + G-rich Low_complexity Low_complexity 1 106 0 895 265 123 19 chr5 36379102 36379461 -163250689 + L1MD2 LINE L1 5714 6109 -250 1078 281 109 38 chr5 36379461 36379593 -163250557 + MLT1D LTR MaLR 2 123 -382 1958 131 33 7 chr5 36379593 36379898 -163250252 + AluSq SINE Alu 1 313 0 1078 281 109 38 chr5 36379898 36380214 -163249936 + MLT1D LTR MaLR 123 482 -23 990 212 19 35 chr5 36380220 36380479 -163249671 + L1MD2 LINE L1 6104 6358 -1 1922 293 75 19 chr5 36380498 36381552 -163248598 + L1ME3A LINE L1 5038 6157 -13 4164 187 36 23 chr5 36382469 36382892 -163247258 + L1MB1 LINE L1 5032 5448 -720 2249 97 0 0 chr5 36382892 36383190 -163246960 + AluSx SINE Alu 1 298 -14 4164 187 36 23 chr5 36383190 36383882 -163246268 + L1MB1 LINE L1 5448 6163 -5 1597 159 91 14 chr5 36383891 36384242 -163245908 + L1MA6 LINE L1 5866 6243 -57 302 77 0 0 chr5 36384242 36384281 -163245869 + L1MA6 LINE L1 6205 6243 -57 364 198 35 0 chr5 36384284 36384370 -163245780 + L1MA6 LINE L1 6208 6296 -4 24 0 0 0 chr5 36385062 36385086 -163245064 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 36385480 36385502 -163244648 + AT_rich Low_complexity Low_complexity 1 22 0 25 51 0 0 chr5 36385662 36385701 -163244449 + AT_rich Low_complexity Low_complexity 1 39 0 894 246 84 78 chr5 36385961 36386448 -163243702 + MLT1F1 LTR MaLR 3 492 -75 1680 180 14 34 chr5 36387622 36387972 -163242178 + MER7A DNA MER2_type 1 341 -5 363 23 0 0 chr5 36388083 36388127 -163242023 + (TC)n Simple_repeat Simple_repeat 2 45 0 28 0 0 0 chr5 36388601 36388629 -163241521 + AT_rich Low_complexity Low_complexity 1 28 0 226 240 62 31 chr5 36389884 36389980 -163240170 + MER112 DNA MER1_type 66 164 -96 234 139 10 50 chr5 36390249 36390350 -163239800 + (TA)n Simple_repeat Simple_repeat 2 98 0 32 0 0 0 chr5 36390631 36390663 -163239487 + AT_rich Low_complexity Low_complexity 1 32 0 30 69 0 0 chr5 36392454 36392512 -163237638 + AT_rich Low_complexity Low_complexity 1 58 0 239 366 79 6 chr5 36392541 36392705 -163237445 + L2 LINE L2 2530 2705 -609 435 310 48 48 chr5 36392907 36393175 -163236975 + L2 LINE L2 2991 3258 -55 1952 185 29 0 chr5 36393266 36393612 -163236538 + MLT1A1 LTR MaLR 10 365 0 1692 180 0 22 chr5 36393744 36394055 -163236095 + AluJo SINE Alu 1 304 -8 207 373 56 32 chr5 36395984 36396110 -163234040 - MIR SINE MIR -129 133 5 24 32 0 0 chr5 36396622 36396653 -163233497 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 36397026 36397047 -163233103 + AT_rich Low_complexity Low_complexity 1 21 0 430 323 89 21 chr5 36397508 36397790 -163232360 + L1MDa LINE L1 35 335 -6205 330 26 0 0 chr5 36398210 36398249 -163231901 + (TG)n Simple_repeat Simple_repeat 2 40 0 678 222 54 68 chr5 36399854 36400075 -163230075 - MER20 DNA MER1_type -1 218 1 26 0 0 0 chr5 36400454 36400480 -163229670 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 36401127 36401149 -163229001 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 36401219 36401240 -163228910 + AT_rich Low_complexity Low_complexity 1 21 0 31 44 0 0 chr5 36401344 36401389 -163228761 + AT_rich Low_complexity Low_complexity 1 45 0 255 321 93 56 chr5 36403012 36403227 -163226923 + MIR SINE MIR 29 251 -11 192 40 0 0 chr5 36403965 36403990 -163226160 + (TG)n Simple_repeat Simple_repeat 2 26 0 273 345 65 65 chr5 36404043 36404286 -163225864 + L2 LINE L2 1163 1409 -1905 2198 39 14 21 chr5 36404286 36404612 -163225538 + AluY SINE Alu 1 324 0 273 345 65 65 chr5 36404612 36404753 -163225397 + L2 LINE L2 1408 1548 -1766 266 297 65 65 chr5 36405786 36406049 -163224101 + HAL1 LINE L1 1405 1667 -840 306 0 0 0 chr5 36406088 36406122 -163224028 + (CA)n Simple_repeat Simple_repeat 2 35 0 364 169 45 0 chr5 36406220 36406309 -163223841 + (CATATA)n Simple_repeat Simple_repeat 2 94 0 22 35 0 0 chr5 36407012 36407041 -163223109 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 36407716 36407744 -163222406 + AT_rich Low_complexity Low_complexity 1 28 0 2064 104 38 0 chr5 36407873 36408161 -163221989 - AluY SINE Alu -12 299 1 23 33 0 0 chr5 36408387 36408417 -163221733 + AT_rich Low_complexity Low_complexity 1 30 0 386 344 38 6 chr5 36409076 36409236 -163220914 - L2 LINE L2 -296 3017 2853 873 231 165 42 chr5 36409236 36409559 -163220591 + MLT1A1 LTR MaLR 1 424 -2 1410 316 70 33 chr5 36409572 36410399 -163219751 - L2 LINE L2 -467 2847 1990 2576 175 10 0 chr5 36410602 36411110 -163219040 - L1 LINE L1 -1639 4507 3995 288 0 0 0 chr5 36411676 36411708 -163218442 + (CA)n Simple_repeat Simple_repeat 2 33 0 1642 214 63 41 chr5 36411945 36412435 -163217715 + MLT1D LTR MaLR 3 503 -2 222 91 0 0 chr5 36414522 36414555 -163215595 + (TG)n Simple_repeat Simple_repeat 2 34 0 183 309 27 45 chr5 36415917 36416027 -163214123 - MIR SINE MIR -97 165 58 1825 120 49 0 chr5 36416380 36416646 -163213504 - AluSx SINE Alu -5 307 29 421 367 146 27 chr5 36416717 36417232 -163212918 + L2 LINE L2 2402 2977 -337 229 346 0 0 chr5 36418191 36418272 -163211878 + CT-rich Low_complexity Low_complexity 1 81 0 220 320 69 40 chr5 36419261 36419436 -163210714 + MIR SINE MIR 9 188 -74 441 261 35 74 chr5 36419894 36420177 -163209973 - L1ME3A LINE L1 -166 6004 5733 23 0 0 0 chr5 36420196 36420219 -163209931 + AT_rich Low_complexity Low_complexity 1 23 0 235 218 73 0 chr5 36420240 36420295 -163209855 + L1ME LINE L1 5731 5789 -381 919 248 103 0 chr5 36420345 36420607 -163209543 - L1ME3A LINE L1 -448 5722 5434 1730 106 23 8 chr5 36421335 36421600 -163208550 - L1PA13 LINE L1 0 6163 5895 27 92 0 0 chr5 36422371 36422447 -163207703 + AT_rich Low_complexity Low_complexity 1 76 0 22 35 0 0 chr5 36422837 36422866 -163207284 + AT_rich Low_complexity Low_complexity 1 29 0 34 42 0 0 chr5 36422936 36422984 -163207166 + AT_rich Low_complexity Low_complexity 1 48 0 9682 111 30 2 chr5 36423335 36425472 -163204678 - L1PA3 LINE L1 0 6155 3982 182 194 0 0 chr5 36425724 36425760 -163204390 + L2 LINE L2 3217 3252 -20 250 296 0 0 chr5 36427361 36427432 -163202718 + CT-rich Low_complexity Low_complexity 1 71 0 25 0 0 0 chr5 36427945 36427970 -163202180 + AT_rich Low_complexity Low_complexity 1 25 0 365 309 111 10 chr5 36428252 36428459 -163201691 - L1ME LINE L1 -331 5790 5563 807 188 7 0 chr5 36428479 36428628 -163201522 - AluJb SINE Alu -2 310 161 1245 147 0 76 chr5 36428628 36428852 -163201298 - AluJb SINE Alu -101 211 5 1218 157 9 26 chr5 36429065 36429295 -163200855 + THE1C LTR MaLR 1 226 -149 803 146 35 64 chr5 36429405 36429521 -163200629 + THE1C LTR MaLR 210 321 -54 2537 98 0 46 chr5 36429521 36429910 -163200240 - THE1C LTR MaLR -2 373 3 803 146 35 64 chr5 36429910 36429964 -163200186 + THE1C LTR MaLR 321 375 0 1893 135 31 7 chr5 36430498 36430787 -163199363 - AluSq SINE Alu -17 296 1 195 100 0 0 chr5 36430877 36430907 -163199243 + (T)n Simple_repeat Simple_repeat 1 30 0 1746 132 9 64 chr5 36431788 36431869 -163198281 + Tigger3(Golem) DNA MER2_type 1 85 -1146 2255 76 7 20 chr5 36431869 36432173 -163197977 + AluSg SINE Alu 1 300 -10 1746 132 9 64 chr5 36432173 36432417 -163197733 + Tigger3(Golem) DNA MER2_type 85 308 -923 207 256 0 0 chr5 36432423 36432466 -163197684 + (TG)n Simple_repeat Simple_repeat 1 43 0 241 279 23 0 chr5 36432466 36432552 -163197598 - L1MC4 LINE L1 -1340 6702 6615 214 211 0 0 chr5 36432556 36432594 -163197556 + (TA)n Simple_repeat Simple_repeat 1 38 0 2346 247 97 34 chr5 36433186 36434570 -163195580 + L1MD2 LINE L1 647 2112 -4294 2407 215 35 15 chr5 36434620 36435275 -163194875 + L1MD2 LINE L1 3780 4447 -1959 2186 237 79 23 chr5 36435288 36435452 -163194698 + L1MD2 LINE L1 5227 5380 -1239 1659 147 12 77 chr5 36435452 36435778 -163194372 + AluSx SINE Alu 1 305 -7 2186 237 79 23 chr5 36435778 36436462 -163193688 + L1MD2 LINE L1 5380 6130 -489 957 239 76 40 chr5 36436537 36436838 -163193312 + L1MD2 LINE L1 6293 6604 -15 1195 122 17 0 chr5 36437795 36437976 -163192174 + L1PB1 LINE L1 5608 5791 -360 205 125 21 21 chr5 36438044 36438092 -163192058 + (TA)n Simple_repeat Simple_repeat 2 49 0 2327 123 6 3 chr5 36438157 36438514 -163191636 + L1PB1 LINE L1 5787 6144 -7 2012 137 3 3 chr5 36440033 36440340 -163189810 - AluY SINE Alu -4 307 1 24 0 0 0 chr5 36441201 36441225 -163188925 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr5 36441458 36441484 -163188666 + AT_rich Low_complexity Low_complexity 1 26 0 217 228 18 0 chr5 36442729 36442786 -163187364 + (CA)n Simple_repeat Simple_repeat 1 58 0 2336 136 22 3 chr5 36442915 36443283 -163186867 + THE1C LTR MaLR 1 375 0 317 246 48 12 chr5 36445282 36445449 -163184701 + (TA)n Simple_repeat Simple_repeat 1 173 0 369 293 75 15 chr5 36446202 36446335 -163183815 + MLT1J1 LTR MaLR 193 333 -113 189 0 0 0 chr5 36446471 36446492 -163183658 + (A)n Simple_repeat Simple_repeat 1 21 0 256 286 29 0 chr5 36446616 36446686 -163183464 + L2 LINE L2 3201 3272 0 237 336 0 26 chr5 36447155 36447271 -163182879 + GA-rich Low_complexity Low_complexity 4 116 0 30 27 0 0 chr5 36447370 36447407 -163182743 + AT_rich Low_complexity Low_complexity 1 37 0 3226 169 64 3 chr5 36447796 36448434 -163181716 - Tigger3(Golem) DNA MER2_type 0 3029 2353 408 250 52 15 chr5 36448621 36448757 -163181393 + Charlie1 DNA MER1_type 2621 2761 0 1283 267 59 24 chr5 36449779 36450248 -163179902 + MLT1G LTR MaLR 35 588 -2 1602 162 40 0 chr5 36451147 36451446 -163178704 + AluSx SINE Alu 1 310 0 931 186 104 0 chr5 36451708 36451929 -163178221 - Tigger2 DNA MER2_type 0 2718 2475 3549 166 45 31 chr5 36451998 36452279 -163177871 - Tigger2 DNA MER2_type -1971 747 471 1816 123 8 0 chr5 36452279 36452539 -163177611 - AluSg1 SINE Alu -8 301 40 3549 166 45 31 chr5 36452539 36452994 -163177156 - Tigger2 DNA MER2_type -2247 471 1 189 159 0 0 chr5 36453622 36453666 -163176484 + (TA)n Simple_repeat Simple_repeat 1 44 0 582 208 30 42 chr5 36453943 36454111 -163176039 - LTR40a LTR ERVL -1 518 353 389 276 172 23 chr5 36454112 36454286 -163175864 - MIR SINE MIR -61 201 2 467 229 37 0 chr5 36455594 36455703 -163174447 - MIR SINE MIR -37 225 113 569 342 7 48 chr5 36456805 36457077 -163173073 - MIR SINE MIR 0 262 2 2227 301 96 75 chr5 36459186 36460807 -163169343 + L2 LINE L2 690 2344 -970 214 339 59 17 chr5 36461250 36461368 -163168782 + MIR3 SINE MIR 55 177 -31 32 0 0 0 chr5 36462051 36462083 -163168067 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 36462138 36462161 -163167989 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 36463455 36463476 -163166674 + AT_rich Low_complexity Low_complexity 1 21 0 1768 162 59 0 chr5 36463927 36464267 -163165883 - MER46B DNA MER2_type -1 235 1 21 0 0 0 chr5 36465418 36465439 -163164711 + AT_rich Low_complexity Low_complexity 1 21 0 1970 112 49 0 chr5 36465951 36466237 -163163913 - AluSx SINE Alu -12 300 1 23 0 0 0 chr5 36466274 36466297 -163163853 + AT_rich Low_complexity Low_complexity 1 23 0 229 343 99 95 chr5 36467345 36467777 -163162373 - L2 LINE L2 -2 3270 2837 1152 259 29 26 chr5 36468098 36468449 -163161701 + MLT1A2 LTR MaLR 23 374 0 246 386 64 37 chr5 36468623 36469107 -163161043 - L2 LINE L2 -980 2334 1838 191 188 0 47 chr5 36471176 36471240 -163158910 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 1091 96 19 201 chr5 36471989 36472303 -163157847 - Tigger2 DNA MER2_type -1 2717 2461 213 226 0 0 chr5 36472403 36472456 -163157694 + T-rich Low_complexity Low_complexity 1 53 0 209 243 108 0 chr5 36472633 36472707 -163157443 + L2 LINE L2 2410 2491 -823 675 290 123 53 chr5 36472707 36473352 -163156798 + L2 LINE L2 2618 3309 -4 215 368 61 0 chr5 36473335 36473449 -163156701 - L3 LINE CR1 -729 848 728 * 2119 40 0 0 chr5 36475071 36475322 -163154828 - AluY SINE Alu -17 294 44 349 290 99 83 chr5 36476433 36476757 -163153393 + L1M2 LINE L1 799 1127 -5722 288 0 0 0 chr5 36477802 36477834 -163152316 + (TG)n Simple_repeat Simple_repeat 2 33 0 1279 146 135 22 chr5 36477876 36478150 -163152000 - AluSx SINE Alu -7 305 1 522 366 160 13 chr5 36478176 36478627 -163151523 + L2 LINE L2 1851 2367 -947 1164 188 13 4 chr5 36478768 36479002 -163151148 - L1P LINE L1 -1664 4482 4247 398 222 65 81 chr5 36479216 36479401 -163150749 + MIR SINE MIR 66 247 -15 2667 170 12 12 chr5 36480947 36481459 -163148691 - L1PA13 LINE L1 0 6163 5652 1161 148 27 0 chr5 36483235 36483418 -163146732 - MER58B DNA MER1_type 0 341 154 1481 128 144 109 chr5 36483525 36483893 -163146257 - MSTA LTR MaLR -47 381 1 8158 176 6 45 chr5 36483893 36485535 -163144615 - MSTA-int LTR MaLR 0 1580 3 1936 153 137 8 chr5 36485537 36485916 -163144234 - MSTA LTR MaLR 0 428 1 2526 39 0 10 chr5 36486197 36486504 -163143646 + AluY SINE Alu 1 304 -7 22 35 0 0 chr5 36488163 36488192 -163141958 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 36488222 36488245 -163141905 + AT_rich Low_complexity Low_complexity 1 23 0 304 337 46 40 chr5 36489052 36489227 -163140923 + MIR SINE MIR 28 203 -59 1922 102 11 0 chr5 36489541 36489806 -163140344 + AluY SINE Alu 44 311 0 31 26 0 0 chr5 36489823 36489861 -163140289 + AT_rich Low_complexity Low_complexity 1 38 0 213 320 13 115 chr5 36490289 36490445 -163139705 - MIR SINE MIR -9 253 114 412 136 0 0 chr5 36490939 36491005 -163139145 + MADE1 DNA Mariner 13 78 -2 180 111 0 0 chr5 36492560 36492587 -163137563 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2402 129 17 21 chr5 36494072 36494491 -163135659 - L1PA12 LINE L1 -7 6161 5745 228 220 17 0 chr5 36494491 36494550 -163135600 - L1P LINE L1 -1623 4523 4464 773 78 0 0 chr5 36494659 36494762 -163135388 - L1PA11 LINE L1 -327 5847 5745 * 817 229 0 19 chr5 36494759 36494969 -163135181 - L1 LINE L1 -1620 4526 4321 * 7014 163 26 17 chr5 36494967 36496292 -163133858 + L1P LINE L1 3145 4482 -1664 310 283 79 7 chr5 36496434 36496586 -163133564 - L2 LINE L2 -947 2367 2205 1200 219 78 12 chr5 36498751 36499071 -163131079 + MER58B DNA MER1_type 1 341 0 401 270 92 29 chr5 36499603 36499777 -163130373 - L1MEd LINE L1 -5354 765 581 30 59 0 0 chr5 36500345 36500396 -163129754 + AT_rich Low_complexity Low_complexity 1 51 0 202 88 29 0 chr5 36500424 36500458 -163129692 + (TA)n Simple_repeat Simple_repeat 1 35 0 202 194 28 0 chr5 36500625 36500697 -163129453 + (TA)n Simple_repeat Simple_repeat 1 74 0 1944 128 7 0 chr5 36500714 36501025 -163129125 + AluSq SINE Alu 1 313 0 413 232 147 38 chr5 36501082 36501401 -163128749 - L1MC5 LINE L1 -157 7804 7451 342 0 0 0 chr5 36501728 36501766 -163128384 + (TG)n Simple_repeat Simple_repeat 2 39 0 2024 113 0 33 chr5 36502962 36503264 -163126886 + AluSg SINE Alu 6 297 -13 594 111 44 0 chr5 36503412 36503502 -163126648 + Tigger3(Golem) DNA MER2_type 2800 2893 -136 407 253 23 0 chr5 36503521 36503695 -163126455 + (TA)n Simple_repeat Simple_repeat 1 178 0 189 339 123 0 chr5 36503857 36503987 -163126163 + MIR SINE MIR 34 179 -83 235 351 39 29 chr5 36504128 36504336 -163125814 + L2 LINE L2 2878 3087 -226 1987 142 7 0 chr5 36504505 36504800 -163125350 - AluSq SINE Alu -15 298 2 1920 210 50 17 chr5 36504976 36505438 -163124712 - L1MB4 LINE L1 -52 6128 5652 379 301 20 55 chr5 36505762 36505961 -163124189 + LTR33 LTR ERVL 330 521 0 2220 58 27 7 chr5 36506595 36506888 -163123262 - AluY SINE Alu -12 299 1 1094 189 16 0 chr5 36507051 36507241 -163122909 - MLT1B LTR MaLR -6 384 192 1212 52 0 0 chr5 36507282 36507436 -163122714 - L1PA4 LINE L1 -3 6152 5999 327 255 1 61 chr5 36507437 36507553 -163122597 - MLT1B LTR MaLR -164 226 125 1817 116 0 4 chr5 36508653 36508904 -163121246 + AluSx SINE Alu 2 251 -61 350 301 44 7 chr5 36509610 36509746 -163120404 + MLT1J2 LTR MaLR 8 148 -302 255 125 0 0 chr5 36509752 36509792 -163120358 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 2263 86 20 0 chr5 36509792 36510095 -163120055 - AluSc SINE Alu 0 309 1 271 89 0 67 chr5 36510789 36510834 -163119316 + AluSg/x SINE Alu 162 203 -99 921 84 0 0 chr5 36510846 36510993 -163119157 + AluSc SINE Alu 163 309 0 283 282 82 9 chr5 36511783 36511893 -163118257 - MARNA DNA Mariner -342 244 127 408 325 113 22 chr5 36512408 36512682 -163117468 - L2 LINE L2 -1102 2212 1914 1488 242 18 45 chr5 36513114 36513382 -163116768 - MLT1A2 LTR MaLR -1 373 116 2303 91 0 0 chr5 36513382 36513669 -163116481 - AluSc SINE Alu -3 306 20 1488 242 18 45 chr5 36513669 36513780 -163116370 - MLT1A2 LTR MaLR -258 116 4 488 127 13 0 chr5 36514083 36514162 -163115988 - MADE1 DNA Mariner 0 80 1 1677 114 4 30 chr5 36514377 36514640 -163115510 + AluSx SINE Alu 40 295 -17 336 24 0 0 chr5 36515121 36515162 -163114988 + (TG)n Simple_repeat Simple_repeat 2 42 0 1153 135 23 37 chr5 36516842 36517057 -163113093 + L1PA13 LINE L1 5944 6155 -8 267 285 16 24 chr5 36517534 36517657 -163112493 + HAL1 LINE L1 2228 2349 -158 21 0 0 0 chr5 36518981 36519002 -163111148 + AT_rich Low_complexity Low_complexity 1 21 0 303 154 0 0 chr5 36520065 36520130 -163110020 + T-rich Low_complexity Low_complexity 1 65 0 2384 59 7 7 chr5 36520307 36520610 -163109540 - AluY SINE Alu -8 303 1 273 411 0 0 chr5 36520700 36520812 -163109338 + L2 LINE L2 3190 3301 -12 194 289 114 61 chr5 36521095 36521209 -163108941 - L2 LINE L2 -1 3312 3193 527 83 0 0 chr5 36522528 36522600 -163107550 - L1P LINE L1 -2590 3556 3485 1770 248 42 56 chr5 36522930 36523434 -163106716 - MLT1C-int LTR MaLR -434 937 441 1411 224 0 4 chr5 36523436 36523713 -163106437 + AluJo SINE Alu 1 276 -36 276 30 0 0 chr5 36523720 36523753 -163106397 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 1681 204 36 11 chr5 36523758 36524171 -163105979 - MLT1C-int LTR MaLR -1017 354 3 1184 221 16 118 chr5 36524174 36524495 -163105655 - MLT1C LTR MaLR 0 467 103 1860 182 0 0 chr5 36524497 36524805 -163105345 - AluSx SINE Alu -2 310 3 30 69 0 0 chr5 36524863 36524921 -163105229 + AT_rich Low_complexity Low_complexity 1 58 0 2012 125 3 10 chr5 36525868 36526156 -163103994 - AluSq SINE Alu -25 288 3 249 33 0 0 chr5 36526228 36526258 -163103892 + (TG)n Simple_repeat Simple_repeat 2 31 0 195 283 145 71 chr5 36526875 36527158 -163102992 + L2 LINE L2 2214 2517 -797 24 0 0 0 chr5 36527158 36527182 -163102968 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 36527874 36527903 -163102247 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 36528002 36528023 -163102127 + AT_rich Low_complexity Low_complexity 1 21 0 303 293 100 35 chr5 36528579 36528838 -163101312 + L1ME4a LINE L1 5601 5876 -245 189 0 0 0 chr5 36529467 36529488 -163100662 + (T)n Simple_repeat Simple_repeat 1 21 0 1400 201 80 6 chr5 36529830 36530212 -163099938 + MLT2B1 LTR ERVL 2 467 -53 207 0 0 0 chr5 36530212 36530235 -163099915 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 216 0 0 0 chr5 36530234 36530258 -163099892 + (TA)n Simple_repeat Simple_repeat 1 24 0 336 284 8 16 chr5 36530711 36530838 -163099312 + Tigger1 DNA MER2_type 275 400 -2018 2153 104 51 31 chr5 36530838 36531192 -163098958 - THE1B LTR MaLR -3 361 1 11357 98 5 6 chr5 36531192 36532773 -163097377 - THE1B-int LTR MaLR 0 1580 1 2069 114 99 15 chr5 36532773 36533106 -163097044 - THE1B LTR MaLR 0 364 4 * 2344 188 27 6 chr5 36533106 36533570 -163096580 + Tigger1 DNA MER2_type 401 874 -1544 255 294 5 15 chr5 36533599 36533714 -163096436 + G-rich Low_complexity Low_complexity 1 113 0 284 289 5 43 chr5 36533876 36534063 -163096087 + GA-rich Low_complexity Low_complexity 1 180 0 202 338 54 0 chr5 36534868 36534942 -163095208 - L2 LINE L2 -38 3275 3198 22 35 0 0 chr5 36535399 36535428 -163094722 + AT_rich Low_complexity Low_complexity 1 29 0 2229 113 3 0 chr5 36535708 36536019 -163094131 + AluSx SINE Alu 1 312 0 185 0 0 39 chr5 36536028 36536054 -163094096 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 477 309 26 0 chr5 36536089 36536241 -163093909 - MER5A DNA MER1_type -3 186 31 23 68 0 0 chr5 36536668 36536712 -163093438 + AT_rich Low_complexity Low_complexity 1 44 0 301 123 31 0 chr5 36537007 36537072 -163093078 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 356 323 83 0 chr5 36537354 36537546 -163092604 - LTR33 LTR ERVL -313 208 1 3689 106 44 13 chr5 36538223 36538836 -163091314 + L1MA1 LINE L1 5671 6302 0 249 257 43 0 chr5 36540732 36540802 -163089348 - L2 LINE L2 0 3272 3200 39 74 0 0 chr5 36540930 36541011 -163089139 + AT_rich Low_complexity Low_complexity 1 81 0 500 256 28 56 chr5 36541379 36541559 -163088591 - MIR SINE MIR -25 237 63 1795 160 0 0 chr5 36542531 36542813 -163087337 - AluSc SINE Alu -27 282 1 22 35 0 0 chr5 36544560 36544589 -163085561 + AT_rich Low_complexity Low_complexity 1 29 0 3228 168 41 3 chr5 36544904 36545519 -163084631 + L1PA15 LINE L1 5526 6163 -2 314 133 50 0 chr5 36545875 36545935 -163084215 - MADE1 DNA Mariner 0 80 18 1544 221 77 25 chr5 36546140 36546583 -163083567 + MLT1C LTR MaLR 1 466 -1 455 129 12 234 chr5 36546875 36547046 -163083104 + Tigger1 DNA MER2_type 1 133 -2285 250 222 0 19 chr5 36547042 36547096 -163083054 + Tigger1 DNA MER2_type 273 325 -2093 * 3967 192 29 8 chr5 36547228 36548025 -163082125 + Tigger1 DNA MER2_type 1605 2418 0 182 349 0 0 chr5 36548353 36548416 -163081734 - MIR SINE MIR -16 246 184 483 283 90 49 chr5 36548519 36548929 -163081221 + MLT1L LTR MaLR 182 608 -7 1976 141 0 28 chr5 36550420 36550739 -163079411 + AluSg SINE Alu 1 310 0 186 43 0 0 chr5 36550885 36550908 -163079242 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 1621 173 0 61 chr5 36550912 36551242 -163078908 + AluJb SINE Alu 1 310 -2 1501 159 3 65 chr5 36551368 36551677 -163078473 + AluJo SINE Alu 1 290 -22 1942 133 3 7 chr5 36553224 36553518 -163076632 - AluSx SINE Alu -17 295 3 244 196 0 0 chr5 36553847 36553893 -163076257 - MADE1 DNA Mariner -34 46 1 22 0 0 0 chr5 36554390 36554412 -163075738 + AT_rich Low_complexity Low_complexity 1 22 0 313 176 27 0 chr5 36556349 36556423 -163073727 + (TA)n Simple_repeat Simple_repeat 1 76 0 198 343 27 41 chr5 36556996 36557069 -163073081 - MIR SINE MIR -93 115 44 186 296 235 0 chr5 36557681 36557762 -163072388 - MIR SINE MIR -64 144 45 298 359 21 14 chr5 36557977 36558119 -163072031 + L3 LINE CR1 423 565 -1012 256 288 114 15 chr5 36558184 36558316 -163071834 + MIR SINE MIR 105 249 -13 315 184 158 35 chr5 36558370 36558484 -163071666 + L3 LINE CR1 586 713 -864 4687 105 1 3 chr5 36558584 36559270 -163070880 - L1P LINE L1 -3533 2613 1929 5853 93 9 0 chr5 36559270 36560134 -163070016 + L1P LINE L1 2618 3489 -2657 297 291 65 30 chr5 36560136 36560365 -163069785 + L1MC3 LINE L1 392 565 -5480 366 225 12 88 chr5 36560695 36560819 -163069331 + L1MC3 LINE L1 1660 1771 -4793 2297 139 14 3 chr5 36560819 36561179 -163068971 + THE1B LTR MaLR 1 364 0 366 225 12 88 chr5 36561179 36561214 -163068936 + L1MC3 LINE L1 1771 1807 -4757 296 165 0 114 chr5 36561225 36561304 -163068846 + L1MC3 LINE L1 1924 1993 -4571 461 259 46 0 chr5 36561304 36561412 -163068738 + MLT2D LTR ERVL 187 299 -115 781 229 139 40 chr5 36561426 36562053 -163068097 + L1MC3 LINE L1 2008 8196 -7 248 333 0 0 chr5 36562068 36562158 -163067992 + L1M4 LINE L1 4652 4741 -1405 1890 144 0 3 chr5 36562165 36562479 -163067671 + AluSq SINE Alu 1 313 0 21 89 0 0 chr5 36562904 36562960 -163067190 + AT_rich Low_complexity Low_complexity 1 56 0 1646 202 53 43 chr5 36563759 36564155 -163065995 + MLT2D LTR ERVL 1 400 -14 2325 53 3 0 chr5 36565561 36565846 -163064304 + AluY SINE Alu 1 286 -25 234 0 0 0 chr5 36565846 36565872 -163064278 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 990 218 14 23 chr5 36565906 36566122 -163064028 - MER20 DNA MER1_type -5 214 1 406 358 13 0 chr5 36566285 36566436 -163063714 - MER91A DNA MER1_type -35 161 9 1798 161 129 23 chr5 36567099 36567485 -163062665 - MSTA LTR MaLR 0 428 2 16670 190 40 33 chr5 36567485 36569176 -163060974 - L1M3 LINE L1 -444 5724 4046 288 120 0 0 chr5 36569176 36569226 -163060924 + (CA)n Simple_repeat Simple_repeat 2 51 0 16670 190 40 33 chr5 36569226 36572295 -163057855 - L1M3 LINE L1 -2122 4046 917 1885 83 17 31 chr5 36572292 36572580 -163057570 + L1P LINE L1 3499 3782 -2364 * 1166 248 33 97 chr5 36573444 36573835 -163056315 + MLT2B1 LTR ERVL 1 384 -48 285 188 0 0 chr5 36573892 36573940 -163056210 + MLT2B1 LTR ERVL 367 414 0 407 294 81 54 chr5 36574001 36574297 -163055853 + MLT1I LTR MaLR 106 409 0 521 235 108 20 chr5 36574415 36574619 -163055531 - THE1C LTR MaLR 0 375 154 11442 98 2 4 chr5 36574740 36576497 -163053653 + L1P3 LINE L1 3752 5505 -649 515 118 0 0 chr5 36576497 36576581 -163053569 + L1PA7 LINE L1 6070 6154 0 21 161 0 0 chr5 36576751 36576782 -163053368 + AT_rich Low_complexity Low_complexity 1 31 0 241 322 67 33 chr5 36577360 36577450 -163052700 - L2 LINE L2 -238 3075 2983 717 214 28 8 chr5 36577497 36577662 -163052488 + MLT1A1 LTR MaLR 216 365 0 1057 317 72 38 chr5 36577668 36578223 -163051927 - L2 LINE L2 -585 2729 2156 199 202 46 0 chr5 36578269 36578378 -163051772 + (TA)n Simple_repeat Simple_repeat 1 114 0 345 348 91 36 chr5 36578379 36578598 -163051552 - L2 LINE L2 -1315 1999 1763 726 22 11 0 chr5 36578598 36578690 -163051460 + L1PA4 LINE L1 6061 6153 -2 345 348 91 36 chr5 36578690 36578723 -163051427 - L2 LINE L2 -1551 1763 1733 1135 226 41 0 chr5 36578920 36579141 -163051009 - Tigger7 DNA MER2_type -503 230 1 980 279 74 7 chr5 36580004 36580301 -163049849 - MLT1E2 LTR MaLR 0 626 310 579 82 0 103 chr5 36580708 36580805 -163049345 + THE1C LTR MaLR 1 87 -288 1261 246 50 52 chr5 36580816 36581100 -163049050 + L1MCa LINE L1 940 1224 -5202 1318 188 54 44 chr5 36581100 36581398 -163048752 + AluSx SINE Alu 1 301 -11 1261 246 50 52 chr5 36581398 36581657 -163048493 + L1MCa LINE L1 1224 1482 -4944 312 27 0 0 chr5 36581846 36581883 -163048267 + (TAA)n Simple_repeat Simple_repeat 2 38 0 323 318 49 88 chr5 36582124 36582429 -163047721 - MLT1I LTR MaLR -23 386 94 1795 186 23 23 chr5 36584077 36584464 -163045686 - L1MB1 LINE L1 0 6168 5782 2236 103 3 0 chr5 36585905 36586207 -163043943 - AluSg SINE Alu -7 303 1 859 168 0 0 chr5 36586738 36586869 -163043281 + FLAM_C SINE Alu 1 131 -12 246 239 47 47 chr5 36587133 36587346 -163042804 - L1ME LINE L1 -5057 1013 801 620 142 21 21 chr5 36587511 36587652 -163042498 + CT-rich Low_complexity Low_complexity 4 144 0 1211 51 11 11 chr5 36587662 36587840 -163042310 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 4474 57 3 7 chr5 36587840 36588415 -163041735 - L1PA7 LINE L1 -17 6137 5565 3185 105 0 0 chr5 36588415 36588874 -163041276 + L1P LINE L1 4392 4850 -1296 287 242 99 0 chr5 36589791 36589882 -163040268 + L1MB3 LINE L1 6004 6103 -80 315 113 0 0 chr5 36589883 36589936 -163040214 + (TG)n Simple_repeat Simple_repeat 1 53 0 455 226 10 0 chr5 36589936 36590038 -163040112 - FLAM_A SINE Alu -28 114 12 471 152 0 0 chr5 36590050 36590142 -163040008 + L1MB3 LINE L1 6089 6180 -3 22 0 0 0 chr5 36591225 36591247 -163038903 + AT_rich Low_complexity Low_complexity 1 22 0 2111 158 11 6 chr5 36591425 36591779 -163038371 - THE1B LTR MaLR -4 360 5 377 320 99 36 chr5 36591836 36592311 -163037839 - L1 LINE L1 -1313 4833 4329 482 115 71 9 chr5 36592498 36592611 -163037539 - L1MA9 LINE L1 -19 6293 6174 518 217 58 7 chr5 36592613 36592751 -163037399 - L1MA9 LINE L1 -237 6075 5931 237 309 93 80 chr5 36594211 36594586 -163035564 + L3 LINE CR1 1193 1572 -5 433 336 102 18 chr5 36594633 36594859 -163035291 - MIR SINE MIR -13 249 5 448 224 9 0 chr5 36595383 36595490 -163034660 + MLT1C-int LTR MaLR 1619 1726 -9 1517 226 100 9 chr5 36595503 36595924 -163034226 + MLT1C LTR MaLR 6 464 -3 39 60 0 0 chr5 36595964 36596031 -163034119 + AT_rich Low_complexity Low_complexity 1 67 0 705 104 17 9 chr5 36596343 36596458 -163033692 - MLT2C2 LTR ERVL -324 140 25 2354 82 0 19 chr5 36596996 36597313 -163032837 - AluY SINE Alu 0 311 1 463 340 65 10 chr5 36597636 36597939 -163032211 - MLT1J1 LTR MaLR -80 370 49 280 240 143 32 chr5 36598209 36598363 -163031787 + L2 LINE L2 1906 2076 -1238 206 412 35 35 chr5 36598911 36599081 -163031069 - MER5A DNA MER1_type -16 173 4 213 316 128 25 chr5 36599158 36599354 -163030796 + L3 LINE CR1 1240 1455 -122 3545 161 30 2 chr5 36600011 36600619 -163029531 - L1PA16 LINE L1 -104 6062 5438 54 16 0 0 chr5 36600988 36601049 -163029101 + AT_rich Low_complexity Low_complexity 1 61 0 645 217 88 77 chr5 36601158 36601430 -163028720 - MLT1B LTR MaLR -113 277 3 207 345 69 0 chr5 36601638 36601725 -163028425 + L2 LINE L2 3209 3301 -12 584 305 145 36 chr5 36602036 36602545 -163027605 + L2 LINE L2 2491 3048 -265 21 0 0 0 chr5 36602593 36602614 -163027536 + AT_rich Low_complexity Low_complexity 1 21 0 2194 228 17 17 chr5 36602849 36603449 -163026701 - L1 LINE L1 -763 5383 4784 509 200 0 30 chr5 36603445 36603580 -163026570 + L1P5 LINE L1 5347 5477 -679 * 21 0 0 0 chr5 36604563 36604584 -163025566 + AT_rich Low_complexity Low_complexity 1 21 0 258 32 0 0 chr5 36604815 36604846 -163025304 + (TA)n Simple_repeat Simple_repeat 1 31 0 228 325 68 17 chr5 36605076 36605193 -163024957 - L2 LINE L2 -1758 1556 1434 288 135 0 58 chr5 36607175 36607279 -163022871 + (TA)n Simple_repeat Simple_repeat 1 98 0 221 287 46 56 chr5 36607302 36607410 -163022740 + L2 LINE L2 2130 2236 -1078 701 287 27 89 chr5 36607416 36607820 -163022330 + L2 LINE L2 2359 2737 -577 460 325 58 34 chr5 36607852 36608058 -163022092 + LTR16A LTR ERVL 220 430 -20 259 272 0 18 chr5 36609971 36610140 -163020010 - FRAM SINE Alu 0 166 1 25 0 0 0 chr5 36610254 36610279 -163019871 + GC_rich Low_complexity Low_complexity 1 25 0 2319 79 0 0 chr5 36611098 36611401 -163018749 + L1PA7 LINE L1 5847 6149 -5 2125 120 3 0 chr5 36611451 36611752 -163018398 + AluSx SINE Alu 1 302 -10 24 53 0 0 chr5 36611929 36611967 -163018183 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 36612091 36612113 -163018037 + AT_rich Low_complexity Low_complexity 1 22 0 31 88 0 0 chr5 36612535 36612615 -163017535 + AT_rich Low_complexity Low_complexity 1 80 0 483 291 16 48 chr5 36613189 36613378 -163016772 - MIR SINE MIR -1 261 79 1474 162 24 4 chr5 36613409 36613692 -163016458 - AluSx SINE Alu 0 318 31 28 0 0 0 chr5 36614039 36614067 -163016083 + AT_rich Low_complexity Low_complexity 1 28 0 372 123 0 0 chr5 36614256 36614313 -163015837 - Alu SINE Alu -1 301 245 38 22 0 0 chr5 36614578 36614623 -163015527 + AT_rich Low_complexity Low_complexity 1 45 0 184 310 17 0 chr5 36615071 36615129 -163015021 + L2 LINE L2 3198 3256 -16 21 57 0 0 chr5 36616781 36616816 -163013334 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 36616859 36616881 -163013269 + AT_rich Low_complexity Low_complexity 1 22 0 2006 185 6 0 chr5 36616926 36617282 -163012868 - MER47A DNA MER2_type -8 358 1 996 229 121 10 chr5 36618379 36618685 -163011465 - MER2 DNA MER2_type -4 340 1 23 0 0 0 chr5 36619719 36619742 -163010408 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr5 36620225 36620259 -163009891 + AT_rich Low_complexity Low_complexity 1 34 0 239 420 57 6 chr5 36620269 36620426 -163009724 + L2 LINE L2 2919 3083 -230 2122 89 0 4 chr5 36620453 36620769 -163009381 - AluSc SINE Alu 0 315 1 2940 171 45 43 chr5 36620779 36621382 -163008768 - L1MC1 LINE L1 0 6333 5730 21 0 0 0 chr5 36621843 36621864 -163008286 + AT_rich Low_complexity Low_complexity 1 21 0 25 99 0 0 chr5 36622617 36622698 -163007452 + AT_rich Low_complexity Low_complexity 1 81 0 24 77 0 0 chr5 36623747 36623799 -163006351 + AT_rich Low_complexity Low_complexity 1 52 0 199 274 96 0 chr5 36623938 36624011 -163006139 - MIR3 SINE MIR -3 205 126 746 178 34 0 chr5 36624711 36624857 -163005293 + L1PB4 LINE L1 6006 6156 0 21 36 0 0 chr5 36626658 36626686 -163003464 + AT_rich Low_complexity Low_complexity 1 28 0 1844 128 0 0 chr5 36627037 36627303 -163002847 + AluY SINE Alu 37 302 -9 21 57 0 0 chr5 36627559 36627594 -163002556 + AT_rich Low_complexity Low_complexity 1 35 0 183 119 34 17 chr5 36627949 36628008 -163002142 + (TA)n Simple_repeat Simple_repeat 2 61 0 40 41 0 0 chr5 36628012 36628061 -163002089 + AT_rich Low_complexity Low_complexity 1 49 0 5088 61 1 2 chr5 36629395 36630537 -162999613 + L1PA5 LINE L1 4730 5870 -284 303 333 101 35 chr5 36682801 36682999 -162947151 - L1M2 LINE L1 -5734 1115 905 257 227 68 57 chr5 36683241 36683417 -162946733 + Charlie7 DNA MER1_type 2430 2607 -5 23 68 0 0 chr5 36684155 36684199 -162945951 + AT_rich Low_complexity Low_complexity 1 44 0 341 315 64 13 chr5 36684463 36684729 -162945421 - L2 LINE L2 -382 2931 2593 22 56 0 0 chr5 36685758 36685794 -162944356 + AT_rich Low_complexity Low_complexity 1 36 0 229 315 41 14 chr5 36685934 36686007 -162944143 - L2 LINE L2 -21 3251 3177 221 359 9 0 chr5 36686692 36686798 -162943352 + GA-rich Low_complexity Low_complexity 2 108 0 321 119 0 34 chr5 36687157 36687216 -162942934 - MLT2A1 LTR ERVL 0 453 397 * 2230 75 3 3 chr5 36687213 36687508 -162942642 - MLT2A1 LTR ERVL -149 295 1 1514 227 39 87 chr5 36689058 36689205 -162940945 + MLT2B1 LTR ERVL 1 154 -366 1875 145 50 36 chr5 36689205 36689564 -162940586 + THE1B LTR MaLR 1 364 0 1514 227 39 87 chr5 36689564 36689958 -162940192 + MLT2B1 LTR ERVL 154 516 -4 237 65 0 0 chr5 36690122 36690153 -162939997 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 224 335 148 19 chr5 36690724 36690879 -162939271 - MIR SINE MIR -3 259 85 230 287 33 49 chr5 36691096 36691218 -162938932 - LTR16A1 LTR ERVL -14 443 324 7375 48 5 2 chr5 36691509 36692404 -162937746 + MER11D LTR ERVK 1 897 0 614 226 186 63 chr5 36693829 36693870 -162936280 + MLT1A1 LTR MaLR 7 42 -323 1983 142 20 0 chr5 36693870 36694173 -162935977 + AluSp SINE Alu 1 309 -4 614 226 186 63 chr5 36694173 36694449 -162935701 + MLT1A1 LTR MaLR 42 363 -2 316 253 148 122 chr5 36694510 36694747 -162935403 + MIR SINE MIR 20 262 0 21 0 0 0 chr5 36694952 36694973 -162935177 + AT_rich Low_complexity Low_complexity 1 21 0 213 333 115 27 chr5 36695188 36695371 -162934779 + L2 LINE L2 3113 3311 -2 221 294 184 0 chr5 36696353 36696462 -162933688 + MIR SINE MIR 17 145 -63 1203 333 69 22 chr5 36696630 36697502 -162932648 + L2 LINE L2 2407 3313 0 3849 204 46 39 chr5 36697611 36698851 -162931299 + L1MB3 LINE L1 4907 6175 -8 192 315 8 100 chr5 36699025 36699155 -162930995 - L3 LINE CR1 -1341 236 119 22 0 0 0 chr5 36699457 36699479 -162930671 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 36699679 36699722 -162930428 + AT_rich Low_complexity Low_complexity 1 43 0 303 179 0 0 chr5 36699993 36700060 -162930090 + (CAT)n Simple_repeat Simple_repeat 3 69 0 320 288 265 8 chr5 36700073 36700235 -162929915 - MIR SINE MIR -23 239 38 21 57 0 0 chr5 36701028 36701063 -162929087 + AT_rich Low_complexity Low_complexity 1 35 0 512 246 31 0 chr5 36701082 36701212 -162928938 - MIR SINE MIR -69 193 60 242 284 74 0 chr5 36701364 36701459 -162928691 + LTR50 LTR ERVL 1 102 -693 6482 124 10 1 chr5 36702936 36704715 -162925435 - L1PA8A LINE L1 0 6131 4337 6618 129 13 29 chr5 36704715 36705854 -162924296 + L1PA8A LINE L1 3211 4331 -1815 367 263 10 30 chr5 36706250 36706349 -162923801 + 7SK RNA RNA 1 97 -96 21 0 0 0 chr5 36707025 36707046 -162923104 + AT_rich Low_complexity Low_complexity 1 21 0 722 300 27 27 chr5 36707781 36708038 -162922112 - MIR SINE MIR -1 261 5 1928 135 10 3 chr5 36708551 36708854 -162921296 - AluSq SINE Alu -2 311 7 1360 161 107 18 chr5 36709378 36709658 -162920492 + THE1C LTR MaLR 1 305 -70 9690 134 35 5 chr5 36709695 36711228 -162918922 + THE1C-int LTR MaLR 1 1580 0 1941 158 21 34 chr5 36711228 36711608 -162918542 + THE1C LTR MaLR 1 375 0 1641 189 3 10 chr5 36711939 36712241 -162917909 + AluJb SINE Alu 1 300 -12 1296 270 53 20 chr5 36712526 36712978 -162917172 - MLT1C LTR MaLR 0 467 1 210 37 0 0 chr5 36713043 36713070 -162917080 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr5 36713175 36713203 -162916947 + AT_rich Low_complexity Low_complexity 1 28 0 219 226 17 43 chr5 36714195 36714310 -162915840 + T-rich Low_complexity Low_complexity 6 117 0 11314 214 41 31 chr5 36714409 36714459 -162915691 + L1MA4 LINE L1 12 60 -6422 207 0 0 0 chr5 36714459 36714482 -162915668 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 11314 214 41 31 chr5 36714482 36718951 -162911199 + L1MA4 LINE L1 60 4479 -2003 1936 159 48 17 chr5 36718951 36719304 -162910846 - THE1B LTR MaLR 0 364 1 11314 214 41 31 chr5 36719304 36719598 -162910552 + L1MA4 LINE L1 4479 4768 -1714 1640 135 32 97 chr5 36719598 36719999 -162910151 - THE1C LTR MaLR 0 375 1 11314 214 41 31 chr5 36719999 36721394 -162908756 + L1MA4 LINE L1 4768 6422 -60 536 171 9 0 chr5 36721402 36721513 -162908637 + L1MA4 LINE L1 6174 6285 -15 48 77 0 0 chr5 36721524 36721628 -162908522 + AT_rich Low_complexity Low_complexity 1 104 0 21 0 0 0 chr5 36721682 36721703 -162908447 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 36722078 36722100 -162908050 + AT_rich Low_complexity Low_complexity 1 22 0 820 187 0 0 chr5 36722565 36722715 -162907435 - Tigger1 DNA MER2_type -3 2415 2266 9573 106 14 31 chr5 36722746 36724248 -162905902 + L1PA13 LINE L1 433 1909 -4237 565 159 40 24 chr5 36724252 36724378 -162905772 - Tigger1 DNA MER2_type -161 2257 2130 * 2295 165 61 57 chr5 36724367 36724876 -162905274 - Tigger1 DNA MER2_type -1665 753 243 2280 204 44 25 chr5 36724876 36725444 -162904706 - L1P LINE L1 -2431 3715 3137 * 5399 171 41 12 chr5 36725443 36726740 -162903410 + L1PA13 LINE L1 4164 5496 -672 641 234 31 42 chr5 36726787 36726979 -162903171 + L1MC3 LINE L1 6920 7109 -676 330 26 0 0 chr5 36726982 36727021 -162903129 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 3932 157 8 1 chr5 36727022 36727684 -162902466 + L1PA13 LINE L1 5493 6158 -5 1001 206 36 24 chr5 36727686 36727933 -162902217 - Tigger1 DNA MER2_type -2168 250 1 6710 189 46 21 chr5 36728313 36730065 -162900085 + L1MA3 LINE L1 2629 4482 -3083 2126 144 11 8 chr5 36730065 36730419 -162899731 + THE1A LTR MaLR 1 355 0 6710 189 46 21 chr5 36730419 36731418 -162898732 + L1MA3 LINE L1 4482 5454 -2111 6326 163 16 3 chr5 36731430 36733317 -162896833 + L1MA3 LINE L1 5818 7723 -1 255 358 43 12 chr5 36733559 36733721 -162896429 + MER115 DNA AcHobo 1 167 -526 404 341 24 6 chr5 36733855 36734022 -162896128 - MIR SINE MIR -58 204 35 34 42 0 0 chr5 36734518 36734566 -162895584 + AT_rich Low_complexity Low_complexity 1 48 0 3594 94 2 2 chr5 36734637 36735118 -162895032 + THE1B-int LTR MaLR 1100 1580 0 1844 122 0 90 chr5 36735120 36735464 -162894686 + THE1B LTR MaLR 3 315 -49 21 57 0 0 chr5 36736086 36736121 -162894029 + AT_rich Low_complexity Low_complexity 1 35 0 411 330 145 51 chr5 36736476 36736930 -162893220 + L2 LINE L2 2817 3313 0 766 166 0 28 chr5 36739188 36739333 -162890817 - FLAM_C SINE Alu 0 143 3 344 284 72 50 chr5 36739450 36739728 -162890422 + L2 LINE L2 1799 2082 -1232 2477 166 18 0 chr5 36739905 36740352 -162889798 - L1MA8 LINE L1 -22 6269 5815 394 170 149 0 chr5 36740357 36740451 -162889699 + L1MA4 LINE L1 5748 5855 -445 198 0 0 0 chr5 36742188 36742210 -162887940 + (CAT)n Simple_repeat Simple_repeat 3 24 0 2008 80 40 4 chr5 36742876 36743198 -162886952 + AluSq SINE Alu 1 332 0 25 65 0 0 chr5 36744707 36744753 -162885397 + AT_rich Low_complexity Low_complexity 1 46 0 236 283 0 0 chr5 36745137 36745190 -162884960 + (CATA)n Simple_repeat Simple_repeat 3 55 0 460 357 68 51 chr5 36745322 36745792 -162884358 + MLT1H LTR MaLR 2 479 -70 427 232 63 79 chr5 36745794 36745984 -162884166 - L1MEd LINE L1 -4930 1189 1003 927 248 12 28 chr5 36745986 36746240 -162883910 + MLT1A1 LTR MaLR 114 363 -2 335 343 46 29 chr5 36746266 36746466 -162883684 + L1ME LINE L1 1253 1605 -5002 25 65 0 0 chr5 36746559 36746605 -162883545 + AT_rich Low_complexity Low_complexity 1 46 0 4726 182 52 0 chr5 36746613 36747837 -162882313 + L1PA16 LINE L1 4927 6209 0 319 220 61 8 chr5 36747876 36747990 -162882160 + L1ME LINE L1 1586 1824 -4602 3108 286 68 24 chr5 36748015 36749768 -162880382 + L1ME LINE L1 3538 5368 -1058 1404 261 98 1 chr5 36749827 36750360 -162879790 + L1ME LINE L1 5467 6052 -394 453 242 35 116 chr5 36750426 36750721 -162879429 + L1MB7 LINE L1 5667 5925 -317 1950 138 0 3 chr5 36750721 36751018 -162879132 + AluSx SINE Alu 1 296 -16 453 242 35 116 chr5 36751018 36751100 -162879050 + L1MB7 LINE L1 5925 6012 -230 243 306 69 7 chr5 36751125 36751269 -162878881 + L1MA10 LINE L1 6179 6331 -3 877 76 0 0 chr5 36751605 36751723 -162878427 + L1PA5 LINE L1 6037 6154 0 23 33 0 0 chr5 36751946 36751976 -162878174 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr5 36752533 36752573 -162877577 + AT_rich Low_complexity Low_complexity 1 40 0 208 313 15 30 chr5 36752777 36752844 -162877306 - MIR SINE MIR -151 111 46 2353 81 0 3 chr5 36753116 36753426 -162876724 + AluY SINE Alu 1 309 -2 249 33 0 0 chr5 36753426 36753456 -162876694 + (TA)n Simple_repeat Simple_repeat 2 31 0 1404 202 184 12 chr5 36753693 36754117 -162876033 - L1MA3 LINE L1 -1 6304 5806 249 33 0 0 chr5 36754150 36754180 -162875970 + (TA)n Simple_repeat Simple_repeat 2 31 0 1661 165 170 16 chr5 36754541 36754911 -162875239 + MSTA LTR MaLR 1 427 -1 20276 157 40 12 chr5 36755009 36758799 -162871351 + L1M1 LINE L1 12 3915 -3650 732 151 16 0 chr5 36758804 36758930 -162871220 + AluSq/x SINE Alu 1 128 -184 2732 121 56 21 chr5 36759036 36759516 -162870634 + L1MA3 LINE L1 5808 6304 -1 482 0 0 17 chr5 36760506 36760565 -162869585 + (TATAA)n Simple_repeat Simple_repeat 5 62 0 25 0 0 0 chr5 36761022 36761047 -162869103 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 36762471 36762502 -162867648 + AT_rich Low_complexity Low_complexity 1 31 0 211 304 114 114 chr5 36764330 36764514 -162865636 - MIR SINE MIR -59 203 20 213 315 89 48 chr5 36764625 36764756 -162865394 + MIR SINE MIR 20 154 -63 30 0 0 0 chr5 36764806 36764836 -162865314 + AT_rich Low_complexity Low_complexity 1 30 0 551 232 85 17 chr5 36765229 36765406 -162864744 + MER5A DNA MER1_type 1 189 0 329 306 74 9 chr5 36765539 36765647 -162864503 - L2 LINE L2 -3 3269 3155 241 344 16 23 chr5 36766281 36766409 -162863741 - L2 LINE L2 -999 2315 2189 1535 210 45 81 chr5 36767651 36768118 -162862032 - MLT1C LTR MaLR -17 450 1 2199 122 0 0 chr5 36768153 36768464 -162861686 + AluSx SINE Alu 1 311 -1 222 171 0 0 chr5 36769942 36769983 -162860167 + (TA)n Simple_repeat Simple_repeat 2 42 0 21 57 0 0 chr5 36770146 36770181 -162859969 + AT_rich Low_complexity Low_complexity 1 35 0 2214 99 0 3 chr5 36770565 36770858 -162859292 + AluSc SINE Alu 1 292 -17 267 114 0 0 chr5 36770965 36771009 -162859141 + (T)n Simple_repeat Simple_repeat 1 44 0 447 68 0 0 chr5 36771121 36771180 -162858970 + (TA)n Simple_repeat Simple_repeat 1 59 0 520 321 29 44 chr5 36771455 36771795 -162858355 - MLT1J1 LTR MaLR 0 446 112 361 240 20 60 chr5 36771945 36772095 -162858055 - L1MC5 LINE L1 -182 7779 7636 206 293 23 83 chr5 36772386 36772519 -162857631 - MIR3 SINE MIR -52 156 32 198 318 91 0 chr5 36775273 36775339 -162854811 + MIR SINE MIR 120 191 -71 2030 96 17 3 chr5 36776010 36776302 -162853848 + AluSc SINE Alu 1 296 -13 182 315 0 76 chr5 36777010 36777102 -162853048 + MER5A DNA MER1_type 23 107 -82 221 283 172 0 chr5 36777359 36777458 -162852692 + MIR SINE MIR 145 260 -2 23 0 0 0 chr5 36777733 36777756 -162852394 + AT_rich Low_complexity Low_complexity 1 23 0 30 0 0 0 chr5 36777820 36777850 -162852300 + AT_rich Low_complexity Low_complexity 1 30 0 2140 73 42 0 chr5 36777909 36778196 -162851954 - AluY SINE Alu -12 299 1 2072 99 0 0 chr5 36778801 36779119 -162851031 - AluSc SINE Alu 0 318 1 2114 118 3 13 chr5 36779119 36779433 -162850717 - AluSx SINE Alu 0 312 1 43 35 0 0 chr5 36779727 36779784 -162850366 + AT_rich Low_complexity Low_complexity 1 57 0 1986 103 4 0 chr5 36780633 36780905 -162849245 + AluSc SINE Alu 35 307 -2 2175 99 3 0 chr5 36781183 36781477 -162848673 + AluY SINE Alu 1 295 -16 3302 234 40 43 chr5 36781609 36782638 -162847512 + L1PA12 LINE L1 2234 3266 -4318 2136 120 10 0 chr5 36782638 36782938 -162847212 - AluSx SINE Alu -9 303 1 3302 234 40 43 chr5 36782938 36783138 -162847012 + L1PA12 LINE L1 3266 3465 -4119 3162 143 76 27 chr5 36783142 36783777 -162846373 + L1PA16 LINE L1 5490 6155 -11 25 0 0 0 chr5 36783928 36783953 -162846197 + AT_rich Low_complexity Low_complexity 1 25 0 193 350 68 29 chr5 36784205 36784308 -162845842 + MIR SINE MIR 18 124 -138 36 87 0 0 chr5 36784385 36784477 -162845673 + AT_rich Low_complexity Low_complexity 1 92 0 21 36 0 0 chr5 36784576 36784604 -162845546 + AT_rich Low_complexity Low_complexity 1 28 0 611 250 0 91 chr5 36784994 36785214 -162844936 - L2 LINE L2 -2 3311 3112 631 42 21 11 chr5 36785464 36785559 -162844591 + (TCTA)n Simple_repeat Simple_repeat 3 98 0 334 344 25 25 chr5 36836784 36836947 -162793203 - MIR SINE MIR -97 165 3 334 369 63 11 chr5 36838075 36838343 -162791807 - L1M4 LINE L1 -1300 4846 4565 1987 191 10 23 chr5 36839375 36839904 -162790246 - L1M2 LINE L1 -643 5648 5131 417 108 15 0 chr5 36839901 36839966 -162790184 - L1MA7 LINE L1 -444 5847 5782 * 397 289 75 35 chr5 36840307 36840535 -162789615 + L1MC/D LINE L1 4777 5013 -1133 264 246 117 35 chr5 36840743 36840914 -162789236 + L1MC/D LINE L1 5265 5449 -2359 248 186 17 0 chr5 36843203 36843262 -162786888 + (TA)n Simple_repeat Simple_repeat 2 61 0 541 237 9 0 chr5 36843262 36843376 -162786774 - MLT1B LTR MaLR -273 117 3 286 175 67 17 chr5 36843455 36843575 -162786575 + (TA)n Simple_repeat Simple_repeat 1 126 0 1990 143 19 10 chr5 36844220 36844528 -162785622 + AluSx SINE Alu 2 312 0 252 264 36 50 chr5 36844535 36844675 -162785475 + MER93a LTR ERV1 117 254 -148 * 374 301 21 21 chr5 36844653 36844796 -162785354 + MER93a LTR ERV1 201 343 -59 21 0 0 0 chr5 36845150 36845171 -162784979 + AT_rich Low_complexity Low_complexity 1 21 0 263 238 24 12 chr5 36846418 36846502 -162783648 + L1M4 LINE L1 2944 3028 -3118 330 234 61 30 chr5 36846553 36846784 -162783366 + L1M4 LINE L1 3029 3266 -2880 276 98 0 0 chr5 36846785 36846826 -162783324 + Tigger1 DNA MER2_type 575 615 -1803 2068 109 0 35 chr5 36846827 36847138 -162783012 - AluSx SINE Alu -12 300 1 962 204 44 19 chr5 36847328 36847770 -162782380 - Charlie5 DNA MER1_type 0 2621 17 23 54 0 0 chr5 36848061 36848098 -162782052 + AT_rich Low_complexity Low_complexity 1 37 0 450 95 214 0 chr5 36848273 36848357 -162781793 + L1PA8 LINE L1 6041 6142 -30 280 153 68 0 chr5 36848359 36848418 -162781732 + L1PA8A LINE L1 6038 6100 -31 247 177 65 0 chr5 36848391 36848453 -162781697 + L1PA8A LINE L1 6038 6103 -28 * 259 164 66 0 chr5 36848488 36848549 -162781601 + L1PA8A LINE L1 6039 6103 -28 259 164 66 0 chr5 36848520 36848581 -162781569 + L1PA8A LINE L1 6039 6103 -28 259 164 66 0 chr5 36848584 36848645 -162781505 + L1PA8A LINE L1 6039 6103 -28 266 169 68 0 chr5 36848650 36848709 -162781441 + L1PA8A LINE L1 6041 6103 -28 * 398 59 0 0 chr5 36848680 36848731 -162781419 + L1PA8 LINE L1 6078 6128 -44 376 294 46 50 chr5 36848832 36848930 -162781220 + HAL1 LINE L1 964 1061 -1446 2571 45 0 7 chr5 36848930 36849239 -162780911 + AluY SINE Alu 1 307 -4 376 294 46 50 chr5 36849239 36849358 -162780792 + HAL1 LINE L1 1061 1180 -1327 234 272 10 39 chr5 36849473 36849576 -162780574 + HAL1 LINE L1 1388 1487 -1020 311 296 81 81 chr5 36849610 36849736 -162780414 + HAL1 LINE L1 1600 1725 -782 2048 129 16 0 chr5 36849736 36850039 -162780111 + AluSx SINE Alu 1 308 -4 311 296 81 81 chr5 36850039 36850352 -162779798 + HAL1 LINE L1 1725 2042 -465 1974 126 3 20 chr5 36850352 36850654 -162779496 + AluSg SINE Alu 1 297 -13 311 296 81 81 chr5 36850654 36850795 -162779355 + HAL1 LINE L1 2041 2181 -326 199 326 0 0 chr5 36851523 36851572 -162778578 + MIR SINE MIR 98 146 -62 237 348 85 0 chr5 36851734 36851898 -162778252 - MIR SINE MIR -71 191 14 398 143 13 13 chr5 36852117 36852194 -162777956 - Tigger1 DNA MER2_type -476 1942 1866 1571 160 4 0 chr5 36852197 36852472 -162777678 + AluSg SINE Alu 37 312 0 1150 142 37 50 chr5 36852484 36852702 -162777448 + AluSx SINE Alu 44 258 -54 218 123 15 46 chr5 36852745 36852810 -162777340 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 643 362 91 19 chr5 36853510 36854154 -162775996 + L2 LINE L2 2365 3048 -265 6271 158 22 15 chr5 36854542 36855654 -162774496 - Tigger1 DNA MER2_type -1298 1120 1 23 33 0 0 chr5 36855765 36855795 -162774355 + AT_rich Low_complexity Low_complexity 1 30 0 6447 35 8 2 chr5 36855798 36856982 -162773168 + L1P2 LINE L1 4590 5776 -379 5448 180 16 25 chr5 36857375 36857583 -162772567 + L1PB3 LINE L1 4194 4402 -1752 318 67 0 0 chr5 36857583 36857628 -162772522 + (CAATA)n Simple_repeat Simple_repeat 2 46 0 5448 180 16 25 chr5 36857628 36859397 -162770753 + L1PB3 LINE L1 4402 6151 -3 3180 219 101 10 chr5 36859448 36860148 -162770002 + MER21B LTR ERV1 55 818 -45 231 364 58 0 chr5 36861777 36861898 -162768252 + MIR SINE MIR 49 176 -86 1648 205 5 54 chr5 36862423 36862833 -162767317 + MLT1B LTR MaLR 1 390 0 186 207 83 136 chr5 36863035 36863204 -162766946 + L2 LINE L2 3136 3295 -18 23 33 0 0 chr5 36863446 36863476 -162766674 + AT_rich Low_complexity Low_complexity 1 30 0 3567 241 63 42 chr5 36865099 36866429 -162763721 + L1 LINE L1 3941 5298 -848 3438 207 62 6 chr5 36866431 36867478 -162762672 + L1P4 LINE L1 4376 5473 -693 6951 55 0 0 chr5 36867478 36868600 -162761550 - L1PA6 LINE L1 -3 6151 5030 1317 195 4 4 chr5 36868703 36868939 -162761211 - AluSq SINE Alu -77 236 1 233 303 55 9 chr5 36868993 36869102 -162761048 + L2 LINE L2 1587 1700 -1614 2451 286 80 95 chr5 36870084 36871850 -162758300 + L2 LINE L2 262 2002 -1312 669 294 35 51 chr5 36871889 36872144 -162758006 + L2 LINE L2 2553 2803 -511 2020 83 0 104 chr5 36872144 36872482 -162757668 + AluSg SINE Alu 1 303 -7 294 227 28 28 chr5 36872707 36872848 -162757302 + G-rich Low_complexity Low_complexity 2 142 0 403 302 90 37 chr5 36872969 36873237 -162756913 + L2 LINE L2 2996 3277 -36 851 189 87 5 chr5 36873638 36873823 -162756327 + L1MC1 LINE L1 6128 6327 -6 299 336 73 69 chr5 36874203 36874450 -162755700 - MIR SINE MIR -12 250 3 384 362 93 47 chr5 36875413 36875907 -162754243 + MLT1K LTR MaLR 70 586 -2 23 0 0 0 chr5 36876118 36876141 -162754009 + AT_rich Low_complexity Low_complexity 1 23 0 234 62 0 0 chr5 36876540 36876572 -162753578 + (CA)n Simple_repeat Simple_repeat 2 33 0 10964 212 21 51 chr5 36876572 36879486 -162750664 + L1M1 LINE L1 13 3236 -4329 1779 148 18 0 chr5 36879486 36879763 -162750387 - AluSx SINE Alu -6 306 25 10964 212 21 51 chr5 36879763 36879912 -162750238 + L1M1 LINE L1 3236 3388 -4177 8563 220 50 9 chr5 36880319 36882560 -162747590 + L1M1 LINE L1 3496 5827 -1738 1099 228 19 0 chr5 36882541 36882848 -162747302 + L1 LINE L1 4306 4618 -2947 * 2949 186 49 9 chr5 36883611 36884260 -162745890 - L1MB1 LINE L1 -3 6165 5491 21 0 0 0 chr5 36884291 36884312 -162745838 + AT_rich Low_complexity Low_complexity 1 21 0 1913 141 0 0 chr5 36884337 36884646 -162745504 - AluSx SINE Alu 0 309 1 252 234 47 75 chr5 36886035 36886142 -162744008 - MIR SINE MIR -105 157 54 22 80 0 0 chr5 36886190 36886240 -162743910 + AT_rich Low_complexity Low_complexity 1 50 0 541 175 111 16 chr5 36886534 36886660 -162743490 - MER58B DNA MER1_type 0 341 204 17773 52 12 35 chr5 36886671 36889131 -162741019 - L1PA4 LINE L1 -1586 4560 2157 7152 47 6 0 chr5 36889131 36890734 -162739416 + L1PA4 LINE L1 4548 6155 0 257 183 33 0 chr5 36890764 36890824 -162739326 + (CATATA)n Simple_repeat Simple_repeat 1 62 0 242 333 24 16 chr5 36890937 36891060 -162739090 + MIR SINE MIR 126 249 -13 345 223 0 0 chr5 36892531 36892625 -162737525 + (TA)n Simple_repeat Simple_repeat 2 95 0 21 36 0 0 chr5 36893788 36893816 -162736334 + AT_rich Low_complexity Low_complexity 1 28 0 237 65 0 0 chr5 36894164 36894195 -162735955 + (TA)n Simple_repeat Simple_repeat 2 32 0 26 50 0 0 chr5 36894882 36894922 -162735228 + AT_rich Low_complexity Low_complexity 1 40 0 189 107 0 0 chr5 36895378 36895406 -162734744 + (CA)n Simple_repeat Simple_repeat 2 29 0 27 29 0 0 chr5 36895949 36895983 -162734167 + AT_rich Low_complexity Low_complexity 1 34 0 257 208 0 0 chr5 36898043 36898091 -162732059 + L2 LINE L2 3195 3242 -71 2346 21 7 3 chr5 36898982 36899264 -162730886 + AluYa5 SINE Alu 1 283 -28 204 40 0 0 chr5 36900566 36900591 -162729559 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 245 29 29 0 chr5 36900590 36900624 -162729526 + (TG)n Simple_repeat Simple_repeat 2 36 0 339 194 0 0 chr5 36901191 36901284 -162728866 + (TA)n Simple_repeat Simple_repeat 2 94 0 22 0 0 0 chr5 36902081 36902103 -162728047 + AT_rich Low_complexity Low_complexity 1 22 0 258 105 0 0 chr5 36902557 36902595 -162727555 + (TA)n Simple_repeat Simple_repeat 1 38 0 197 133 0 0 chr5 36902721 36902751 -162727399 - L2 LINE L2 -15 3298 3269 49 76 0 0 chr5 36903895 36904000 -162726150 + AT_rich Low_complexity Low_complexity 1 105 0 293 348 135 10 chr5 36904545 36904752 -162725398 + MIR SINE MIR 12 244 -18 22 35 0 0 chr5 36904968 36904997 -162725153 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr5 36905079 36905106 -162725044 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1312 221 40 63 chr5 36905269 36905744 -162724406 - MLT2C2 LTR ERVL 0 464 1 31 68 0 0 chr5 36905826 36905885 -162724265 + AT_rich Low_complexity Low_complexity 1 59 0 2052 131 3 10 chr5 36906950 36907263 -162722887 + AluSx SINE Alu 1 311 -1 277 215 15 0 chr5 36907323 36907388 -162722762 - MER89 LTR ERV1 -9 550 485 1075 249 46 11 chr5 36907492 36907930 -162722220 - MER89 LTR ERV1 -32 527 1 227 27 0 54 chr5 36907953 36907990 -162722160 + (CAAAAA)n Simple_repeat Simple_repeat 3 37 0 800 137 0 46 chr5 36907991 36908122 -162722028 + AluSq/x SINE Alu 1 125 -188 197 86 57 0 chr5 36908122 36908157 -162721993 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 27 29 0 0 chr5 36908266 36908300 -162721850 + AT_rich Low_complexity Low_complexity 1 34 0 360 306 157 20 chr5 36909996 36910404 -162719746 + HAL1b LINE L1 83 546 -802 261 31 0 0 chr5 36910582 36910614 -162719536 - AluSc SINE Alu -13 286 255 638 307 91 66 chr5 36910748 36911282 -162718868 - L2 LINE L2 0 3313 2766 1850 196 6 3 chr5 36911343 36911675 -162718475 + MER7A DNA MER2_type 16 346 0 1689 218 3 3 chr5 36911835 36912161 -162717989 + MLT1A1 LTR MaLR 1 326 -39 23 33 0 0 chr5 36912806 36912836 -162717314 + AT_rich Low_complexity Low_complexity 1 30 0 272 336 64 0 chr5 36912957 36913067 -162717083 + MER110-int LTR ERV1 4336 4452 -195 640 260 129 54 chr5 36913070 36913168 -162716982 + MER110 LTR ERV1 116 205 -286 1291 198 65 47 chr5 36913168 36913506 -162716644 + MER2 DNA MER2_type 1 344 0 640 260 129 54 chr5 36913506 36913757 -162716393 + MER110 LTR ERV1 205 491 0 547 85 43 38 chr5 36915573 36915789 -162714361 + (TA)n Simple_repeat Simple_repeat 1 217 0 314 112 61 10 chr5 36916043 36916141 -162714009 + (TA)n Simple_repeat Simple_repeat 2 104 0 541 104 0 0 chr5 36916142 36916219 -162713931 - AluY SINE Alu -30 281 205 351 0 0 0 chr5 36916243 36916282 -162713868 + (TG)n Simple_repeat Simple_repeat 2 40 0 225 0 0 0 chr5 36916419 36916444 -162713706 + (CA)n Simple_repeat Simple_repeat 2 26 0 2104 115 7 0 chr5 36918281 36918577 -162711573 + AluSx SINE Alu 1 298 -14 2430 72 0 0 chr5 36919286 36919592 -162710558 - AluY SINE Alu -5 306 1 21 0 0 0 chr5 36920116 36920137 -162710013 + AT_rich Low_complexity Low_complexity 1 21 0 1705 262 40 38 chr5 36920842 36921415 -162708735 + MLT1E LTR MaLR 17 590 -3 617 282 126 27 chr5 36921661 36921962 -162708188 + MLT1G1 LTR MaLR 263 593 -2 26 30 0 0 chr5 36922954 36922987 -162707163 + AT_rich Low_complexity Low_complexity 1 33 0 3228 137 27 14 chr5 36923150 36923601 -162706549 - L1MA8 LINE L1 -3 6288 5826 1912 113 3 61 chr5 36923601 36923912 -162706238 - AluSc SINE Alu -16 293 1 3228 137 27 14 chr5 36923912 36924051 -162706099 - L1MA8 LINE L1 -465 5826 5690 1411 180 45 14 chr5 36924213 36924784 -162705366 + L1PA16 LINE L1 5473 6122 -44 3689 152 25 126 chr5 36924836 36925294 -162704856 + L1MB1 LINE L1 5309 5811 -357 1695 126 0 4 chr5 36925294 36925548 -162704602 + AluSx SINE Alu 1 253 -59 3689 152 25 126 chr5 36925548 36925684 -162704466 + L1MB1 LINE L1 5811 5959 -209 2168 102 3 13 chr5 36925684 36925987 -162704163 + AluY SINE Alu 3 302 -9 3689 152 25 126 chr5 36925987 36926347 -162703803 + L1MB1 LINE L1 5959 6168 0 224 282 81 54 chr5 36928096 36928245 -162701905 - MIR SINE MIR -34 228 76 1644 120 47 63 chr5 36928253 36928570 -162701580 - AluSq SINE Alu -1 312 1 1335 174 25 73 chr5 36928956 36929184 -162700966 + MLT1A1 LTR MaLR 1 207 -158 2049 126 38 3 chr5 36929184 36929526 -162700624 + THE1A LTR MaLR 2 355 0 1335 174 25 73 chr5 36929526 36929653 -162700497 + MLT1A1 LTR MaLR 207 339 -26 2476 55 0 7 chr5 36929653 36929963 -162700187 - AluY SINE Alu 0 311 4 235 189 14 14 chr5 36931982 36932056 -162698094 + (TA)n Simple_repeat Simple_repeat 1 74 0 22 0 0 0 chr5 36932662 36932684 -162697466 + AT_rich Low_complexity Low_complexity 1 22 0 367 343 77 33 chr5 36933137 36933502 -162696648 + HAL1 LINE L1 368 748 -1759 473 321 74 5 chr5 36934062 36934277 -162695873 + MIR SINE MIR 31 260 -2 310 371 26 0 chr5 36934874 36935025 -162695125 + MIR SINE MIR 96 250 -12 21 57 0 0 chr5 36935078 36935113 -162695037 + AT_rich Low_complexity Low_complexity 1 35 0 6185 68 2 0 chr5 36935906 36936701 -162693449 - L1PA8 LINE L1 -1 6171 5375 181 280 20 0 chr5 36938316 36938366 -162691784 - MIR SINE MIR -56 152 102 192 319 58 0 chr5 36938462 36938531 -162691619 + MIR SINE MIR 68 140 -122 206 348 22 22 chr5 36939406 36939495 -162690655 + MIR3 SINE MIR 101 189 -19 1010 155 0 6 chr5 36939807 36939981 -162690169 + AluSg/x SINE Alu 140 312 0 183 80 0 0 chr5 36940183 36940208 -162689942 + (T)n Simple_repeat Simple_repeat 1 25 0 605 256 7 114 chr5 36940845 36941126 -162689024 - MER31B LTR ERV1 -5 461 211 442 181 62 49 chr5 36941223 36941367 -162688783 - MER51D LTR ERV1 -43 614 469 311 220 44 11 chr5 36941824 36941915 -162688235 - MER31B LTR ERV1 -372 94 1 232 284 20 20 chr5 36942530 36942632 -162687518 + CT-rich Low_complexity Low_complexity 3 104 0 1033 233 5 98 chr5 36942661 36943047 -162687103 + MLT1A1 LTR MaLR 14 363 -2 206 167 0 56 chr5 36943293 36943320 -162686830 + T-rich Low_complexity Low_complexity 5 29 -26 3051 48 8 0 chr5 36943320 36943698 -162686452 - L1PA5 LINE L1 -4 6150 5770 206 167 0 56 chr5 36943698 36943724 -162686426 + T-rich Low_complexity Low_complexity 29 55 0 24 53 0 0 chr5 36943851 36943889 -162686261 + AT_rich Low_complexity Low_complexity 1 38 0 24 53 0 0 chr5 36944859 36944897 -162685253 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 36945241 36945262 -162684888 + AT_rich Low_complexity Low_complexity 1 21 0 2128 104 0 30 chr5 36945469 36945767 -162684383 + AluSq SINE Alu 1 289 -24 2447 128 8 0 chr5 36946170 36946530 -162683620 - THE1B LTR MaLR 0 364 2 370 305 8 17 chr5 36946583 36946701 -162683449 + L2 LINE L2 3197 3313 0 2131 172 27 5 chr5 36947781 36948187 -162681963 + L1PA13 LINE L1 5743 6157 -6 373 240 12 2 chr5 36949117 36949221 -162680929 - L1M4 LINE L1 -1999 4147 4044 23 33 0 0 chr5 36949354 36949384 -162680766 + AT_rich Low_complexity Low_complexity 1 30 0 1974 119 27 7 chr5 36949386 36949681 -162680469 + AluSx SINE Alu 1 301 -11 2206 127 0 0 chr5 36950041 36950341 -162679809 + AluSx SINE Alu 1 300 -12 234 284 30 0 chr5 36952705 36952772 -162677378 + GA-rich Low_complexity Low_complexity 3 71 0 24 0 0 0 chr5 36954098 36954122 -162676028 + AT_rich Low_complexity Low_complexity 1 24 0 25 75 0 0 chr5 36954617 36954670 -162675480 + AT_rich Low_complexity Low_complexity 1 53 0 3217 55 0 0 chr5 36956672 36957073 -162673077 + L1PA4 LINE L1 5753 6153 -2 1556 329 71 24 chr5 36957229 36957979 -162672171 + L1M4c LINE L1 423 1207 -5096 1687 269 44 38 chr5 36958048 36958848 -162671302 + L1M4c LINE L1 1029 1833 -4551 2876 254 68 15 chr5 36958920 36960626 -162669524 + L1M4c LINE L1 2054 3879 -2503 290 154 29 0 chr5 36960889 36960953 -162669197 - Alu SINE Alu -7 295 245 297 0 0 0 chr5 36960953 36960986 -162669164 + (T)n Simple_repeat Simple_repeat 1 33 0 744 107 82 0 chr5 36960986 36961108 -162669042 - AluSq/x SINE Alu -179 133 2 555 260 138 86 chr5 36961627 36961896 -162668254 - L2 LINE L2 -836 2478 2196 425 382 62 6 chr5 36961912 36962090 -162668060 + MER91A DNA MER1_type 8 195 -1 1133 293 86 34 chr5 36962270 36962803 -162667347 - L2 LINE L2 -1203 2111 1551 249 33 0 0 chr5 36962804 36962834 -162667316 + (CA)n Simple_repeat Simple_repeat 2 31 0 1494 206 17 63 chr5 36962975 36963325 -162666825 + MLT1B LTR MaLR 57 390 0 21 36 0 0 chr5 36963804 36963832 -162666318 + AT_rich Low_complexity Low_complexity 1 28 0 184 150 67 67 chr5 36964009 36964069 -162666081 + L3 LINE CR1 776 835 -742 22 70 0 0 chr5 36964412 36964455 -162665695 + AT_rich Low_complexity Low_complexity 1 43 0 846 261 46 42 chr5 36965269 36965735 -162664415 - LTR40c LTR ERVL 0 519 5 230 259 35 0 chr5 36965796 36965854 -162664296 + L2 LINE L2 3237 3296 -17 420 353 47 22 chr5 36965961 36966193 -162663957 - L2 LINE L2 -554 2760 2523 53 78 0 0 chr5 36966338 36966454 -162663696 + AT_rich Low_complexity Low_complexity 1 116 0 23 0 0 0 chr5 36967105 36967128 -162663022 + AT_rich Low_complexity Low_complexity 1 23 0 269 206 48 16 chr5 36967979 36968042 -162662108 + MER116 DNA Mariner 1 65 -15 450 265 200 14 chr5 36968052 36968267 -162661883 - MIR SINE MIR 0 262 8 671 204 0 0 chr5 36968808 36968945 -162661205 - FRAM SINE Alu -1 175 39 1846 177 0 0 chr5 36969037 36969347 -162660803 + AluSx SINE Alu 1 310 -2 2153 86 4 4 chr5 36970814 36971145 -162659005 + AluSc SINE Alu 1 331 0 4025 152 47 5 chr5 36972596 36973342 -162656808 + L1MA4A LINE L1 5515 6291 -12 393 320 102 27 chr5 36973366 36973591 -162656559 - MIR SINE MIR -19 243 2 1994 134 56 20 chr5 36974069 36974427 -162655723 - THE1C LTR MaLR 0 375 5 228 357 91 46 chr5 36974525 36974788 -162655362 + MLT1K LTR MaLR 278 552 -36 198 295 69 81 chr5 36975656 36975829 -162654321 - L2 LINE L2 -1362 1952 1782 27 73 0 0 chr5 36977968 36978023 -162652127 + AT_rich Low_complexity Low_complexity 1 55 0 269 369 15 23 chr5 36978162 36978292 -162651858 - L2 LINE L2 -655 2659 2531 230 240 0 0 chr5 36978374 36978424 -162651726 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 15848 148 16 8 chr5 36978581 36982135 -162648015 + L1PA10 LINE L1 2584 6164 -4 213 132 0 0 chr5 36982218 36982256 -162647894 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1381 272 62 14 chr5 36983160 36983598 -162646552 + MLT1C LTR MaLR 4 462 -5 22 0 0 0 chr5 36984105 36984127 -162646023 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 36984611 36984639 -162645511 + AT_rich Low_complexity Low_complexity 1 28 0 364 186 0 0 chr5 36985059 36985152 -162644998 - AluJ/FRAM SINE Alu 0 316 224 1069 263 40 54 chr5 36985384 36985840 -162644310 - MLT1E2 LTR MaLR -184 442 1 478 356 121 11 chr5 36985841 36986288 -162643862 - L1MEc LINE L1 -5789 607 112 23 0 0 0 chr5 36987581 36987604 -162642546 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 36987756 36987777 -162642373 + AT_rich Low_complexity Low_complexity 1 21 0 1911 126 51 7 chr5 36989133 36989427 -162640723 - AluSq SINE Alu -4 309 3 381 22 0 0 chr5 36989972 36990018 -162640132 + (CA)n Simple_repeat Simple_repeat 2 47 0 1577 111 0 0 chr5 36992175 36992392 -162637758 - AluSg/x SINE Alu -5 307 91 198 71 0 0 chr5 36992549 36992577 -162637573 + (TTA)n Simple_repeat Simple_repeat 1 28 0 272 191 56 34 chr5 36992674 36992763 -162637387 - L1MC4 LINE L1 -1338 6704 6614 222 219 0 0 chr5 36992765 36992806 -162637344 + (CATATA)n Simple_repeat Simple_repeat 5 45 0 443 345 58 34 chr5 36992817 36993145 -162637005 - L1 LINE L1 -1114 5032 4697 196 212 30 0 chr5 36994567 36994633 -162635517 + (TA)n Simple_repeat Simple_repeat 2 69 0 1746 144 55 38 chr5 36994637 36995004 -162635146 - THE1C LTR MaLR -2 373 1 8841 150 19 34 chr5 36995009 36996606 -162633544 - THE1C-int LTR MaLR -5 1575 4 1621 162 68 41 chr5 36996609 36996974 -162633176 - THE1C LTR MaLR 0 375 1 309 183 0 0 chr5 36996974 36997034 -162633116 + (CA)n Simple_repeat Simple_repeat 1 60 0 2079 125 3 0 chr5 36997526 36997822 -162632328 + AluSg SINE Alu 1 297 -13 47 0 0 0 chr5 36998428 36998475 -162631675 + AT_rich Low_complexity Low_complexity 1 47 0 300 27 0 0 chr5 36998680 36998717 -162631433 + (TG)n Simple_repeat Simple_repeat 2 38 0 232 393 17 38 chr5 36999748 37000038 -162630112 - L2 LINE L2 -475 2839 2556 1340 160 43 43 chr5 37000973 37001254 -162628896 - MSTB1 LTR MaLR 0 432 152 1865 167 0 0 chr5 37002453 37002758 -162627392 + AluSx SINE Alu 5 309 -3 2156 96 3 7 chr5 37003014 37003307 -162626843 - AluSg SINE Alu -18 292 1 31 26 0 0 chr5 37003351 37003389 -162626761 + AT_rich Low_complexity Low_complexity 1 38 0 512 283 168 23 chr5 37004381 37004554 -162625596 - MER58A DNA MER1_type -18 206 9 496 251 153 14 chr5 37004859 37005100 -162625050 + MLT1G LTR MaLR 14 249 -341 1006 197 46 115 chr5 37005245 37005636 -162624514 + MLT1A1 LTR MaLR 2 365 0 1175 118 0 12 chr5 37005663 37005833 -162624317 - AluSc SINE Alu -2 307 140 345 279 8 41 chr5 37005834 37005956 -162624194 + MLT1H1 LTR MaLR 438 555 0 195 293 58 92 chr5 37006111 37006285 -162623865 + L2 LINE L2 2327 2494 -820 268 339 132 28 chr5 37007620 37007909 -162622241 + L3 LINE CR1 843 1161 -416 224 335 114 18 chr5 37010902 37011129 -162619021 - MIR SINE MIR -13 249 1 22 0 0 0 chr5 37011228 37011250 -162618900 + AT_rich Low_complexity Low_complexity 1 22 0 243 313 75 34 chr5 37011536 37011683 -162618467 - MIR SINE MIR -10 252 100 22 0 0 0 chr5 37011768 37011790 -162618360 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 37012068 37012103 -162618047 + AT_rich Low_complexity Low_complexity 1 35 0 777 125 23 0 chr5 37012122 37012250 -162617900 - L1PA15 LINE L1 -1 6164 6034 203 95 48 0 chr5 37012250 37012292 -162617858 + T-rich Low_complexity Low_complexity 1 44 0 1667 196 0 10 chr5 37012292 37012604 -162617546 - AluJb SINE Alu -3 309 1 26 64 0 0 chr5 37013063 37013110 -162617040 + AT_rich Low_complexity Low_complexity 1 47 0 1252 68 6 0 chr5 37013409 37013571 -162616579 - L1PA12 LINE L1 -178 5990 5828 1290 107 25 0 chr5 37013571 37013765 -162616385 + L1PA12 LINE L1 5967 6167 -1 2358 69 10 10 chr5 37013770 37014075 -162616075 + AluY SINE Alu 3 307 -4 505 228 74 20 chr5 37014214 37014363 -162615787 - MIR SINE MIR -58 204 48 22 56 0 0 chr5 37014384 37014420 -162615730 + AT_rich Low_complexity Low_complexity 1 36 0 364 250 23 11 chr5 37014425 37014513 -162615637 + L1PA14 LINE L1 1 89 -7492 7932 18 7 1 chr5 37014521 37015605 -162614545 - L1HS LINE L1 0 6155 5060 414 39 0 0 chr5 37016091 37016143 -162614007 + (CA)n Simple_repeat Simple_repeat 2 53 0 4195 202 31 2 chr5 37016437 37017364 -162612786 + L1MC1 LINE L1 5181 6130 -203 23 54 0 0 chr5 37018203 37018240 -162611910 + AT_rich Low_complexity Low_complexity 1 37 0 260 311 0 0 chr5 37018555 37018616 -162611534 - MER5A DNA MER1_type -122 67 7 21 0 0 0 chr5 37018788 37018809 -162611341 + AT_rich Low_complexity Low_complexity 1 21 0 7968 23 3 0 chr5 37019135 37020095 -162610055 - L1P LINE L1 -758 5388 4426 * 8478 27 0 0 chr5 37020092 37021092 -162609058 + L1P LINE L1 3389 4388 -1758 9781 204 43 114 chr5 37021094 37024523 -162605627 + L1PA14 LINE L1 83 3288 -4296 * 11821 215 22 4 chr5 37024517 37027127 -162603023 + L1PA14 LINE L1 3753 6410 -1174 3552 131 23 70 chr5 37027120 37027867 -162602283 + L1PA14 LINE L1 6644 7355 -244 * 516 96 24 0 chr5 37028005 37028088 -162602062 - L1PA5 LINE L1 -5 6149 6065 1620 129 0 35 chr5 37028713 37029004 -162601146 - AluSx SINE Alu 0 317 36 715 367 46 26 chr5 37029195 37029735 -162600415 - HERVL LTR ERVL -3424 2230 1680 180 0 0 0 chr5 37029735 37029755 -162600395 + (TTG)n Simple_repeat Simple_repeat 3 22 0 446 363 23 33 chr5 37030126 37030520 -162599630 - HERVL LTR ERVL -4358 1296 907 2112 117 0 52 chr5 37030801 37031127 -162599023 - AluSc SINE Alu 0 309 1 391 232 293 0 chr5 37031530 37031694 -162598456 - LTR50 LTR ERVL -4 791 580 729 268 206 5 chr5 37031879 37032267 -162597883 - LTR50 LTR ERVL -329 466 1 326 320 80 7 chr5 37032496 37032646 -162597504 - MIR SINE MIR -34 228 68 3142 194 31 16 chr5 37033772 37033793 -162596357 + L1MC2 LINE L1 5588 5607 -737 1892 104 41 4 chr5 37033793 37034062 -162596088 + AluSg SINE Alu 1 309 0 205 67 0 0 chr5 37034062 37034092 -162596058 + (CAA)n Simple_repeat Simple_repeat 1 180 0 3142 194 31 16 chr5 37034092 37034806 -162595344 + L1MC2 LINE L1 5607 6335 -9 21 0 0 0 chr5 37036826 37036847 -162593303 + AT_rich Low_complexity Low_complexity 1 21 0 600 114 23 0 chr5 37038259 37038390 -162591760 + (TA)n Simple_repeat Simple_repeat 2 135 0 21 36 0 0 chr5 37038400 37038428 -162591722 + AT_rich Low_complexity Low_complexity 1 28 0 24 53 0 0 chr5 37038656 37038694 -162591456 + AT_rich Low_complexity Low_complexity 1 38 0 273 182 0 0 chr5 37040206 37040261 -162589889 + CT-rich Low_complexity Low_complexity 1 55 0 21 36 0 0 chr5 37041394 37041422 -162588728 + AT_rich Low_complexity Low_complexity 1 28 0 186 229 21 21 chr5 37041546 37041594 -162588556 - L2 LINE L2 0 3313 3266 369 283 78 54 chr5 37042441 37042646 -162587504 + L2 LINE L2 3099 3308 -5 241 304 104 9 chr5 37042722 37042837 -162587313 - MIR SINE MIR -65 197 72 3716 199 49 39 chr5 37042984 37043837 -162586313 + L1MB3 LINE L1 6 870 -5514 216 0 0 0 chr5 37043837 37043861 -162586289 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3716 199 49 39 chr5 37043861 37043908 -162586242 + L1MB3 LINE L1 870 915 -5469 205 297 93 25 chr5 37043948 37044066 -162586084 + MIR SINE MIR 72 197 -65 6350 189 56 43 chr5 37044188 37046222 -162583928 + L1MB3 LINE L1 923 2978 -3404 2931 275 112 16 chr5 37046243 37046397 -162583753 + L1MB3 LINE L1 3164 3302 -3080 2267 77 0 7 chr5 37046397 37046697 -162583453 + AluY SINE Alu 1 298 -13 2931 275 112 16 chr5 37046697 37048245 -162581905 + L1MB3 LINE L1 3302 5033 -1349 243 0 0 0 chr5 37048245 37048272 -162581878 + (TG)n Simple_repeat Simple_repeat 2 28 0 241 83 0 0 chr5 37048293 37048341 -162581809 - LTR66 LTR ERVL -169 441 394 26 0 0 0 chr5 37048470 37048496 -162581654 + AT_rich Low_complexity Low_complexity 1 26 0 3646 197 13 23 chr5 37048781 37049710 -162580440 + L1MB3 LINE L1 5325 6247 -172 22 0 0 0 chr5 37050451 37050473 -162579677 + AT_rich Low_complexity Low_complexity 1 22 0 195 42 0 0 chr5 37050634 37050658 -162579492 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2606 91 3 5 chr5 37050933 37051305 -162578845 + L1PA8 LINE L1 5800 6170 -2 24 0 0 0 chr5 37052851 37052875 -162577275 + AT_rich Low_complexity Low_complexity 1 24 0 2166 115 0 3 chr5 37052920 37053232 -162576918 - AluSx SINE Alu -1 311 1 246 305 92 28 chr5 37054248 37054389 -162575761 + LTR67 LTR ERVL 400 549 -8 223 280 0 0 chr5 37056140 37056190 -162573960 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 332 240 37 0 chr5 37056191 37056300 -162573850 - L1MC4 LINE L1 -1139 6646 6570 186 189 0 0 chr5 37056302 37056339 -162573811 + (TA)n Simple_repeat Simple_repeat 1 37 0 247 154 5 0 chr5 37058087 37058162 -162571988 - LTR66 LTR ERVL 0 520 394 305 214 0 14 chr5 37058162 37058232 -162571918 - L1MCa LINE L1 -4363 2063 1995 25 51 0 0 chr5 37058301 37058340 -162571810 + AT_rich Low_complexity Low_complexity 1 39 0 369 0 0 0 chr5 37058340 37058381 -162571769 + (CA)n Simple_repeat Simple_repeat 2 42 0 1007 193 115 81 chr5 37058381 37058520 -162571630 - MLT2C1 LTR ERVL -65 332 199 432 0 0 0 chr5 37058520 37058568 -162571582 + (TG)n Simple_repeat Simple_repeat 1 48 0 1007 193 115 81 chr5 37058568 37058749 -162571401 - MLT2C1 LTR ERVL -198 199 1 1053 196 121 12 chr5 37059005 37059245 -162570905 - MLT1C LTR MaLR -201 266 1 1722 100 34 4 chr5 37059313 37059582 -162570568 - L1PA10 LINE L1 -5 6163 5887 273 154 0 19 chr5 37059993 37060045 -162570105 + LTR22 LTR ERVK 3 53 -527 * 1518 206 48 6 chr5 37060023 37060358 -162569792 + LTR22 LTR ERVK 161 509 -71 237 297 11 11 chr5 37060609 37060700 -162569450 + GA-rich Low_complexity Low_complexity 2 92 0 617 291 74 14 chr5 37060878 37061525 -162568625 + L1ME3 LINE L1 5440 6161 -1 361 239 132 129 chr5 37061559 37061954 -162568196 + MER20B DNA MER1_type 315 713 -70 2236 147 23 52 chr5 37061954 37062395 -162567755 + MSTA LTR MaLR 1 428 0 361 239 132 129 chr5 37062395 37062463 -162567687 + MER20B DNA MER1_type 713 779 -4 302 342 83 19 chr5 37062478 37062744 -162567406 - L2 LINE L2 -65 3248 2966 189 0 0 0 chr5 37064658 37064679 -162565471 + (A)n Simple_repeat Simple_repeat 1 21 0 369 248 23 54 chr5 37064855 37064984 -162565166 - L2 LINE L2 -12 3301 3177 863 192 26 0 chr5 37064999 37065192 -162564958 + L1PBa LINE L1 3 200 -6663 9114 127 16 3 chr5 37065194 37067284 -162562866 + L1PBa LINE L1 636 2940 -3923 403 176 0 0 chr5 37067284 37067358 -162562792 + AluJ/FRAM SINE Alu 229 302 0 259 341 55 0 chr5 37067431 37067522 -162562628 + HAL1 LINE L1 588 683 -1824 800 239 101 5 chr5 37067523 37067732 -162562418 + MLT1E2 LTR MaLR 5 233 -393 26 0 0 0 chr5 37067732 37067758 -162562392 + AT_rich Low_complexity Low_complexity 1 26 0 395 365 60 25 chr5 37067805 37068158 -162561992 + HAL1 LINE L1 743 1107 -1400 323 274 48 8 chr5 37068221 37068345 -162561805 + HAL1 LINE L1 1260 1388 -1119 1001 242 239 46 chr5 37068430 37068920 -162561230 + MLT1E1 LTR MaLR 5 612 -42 2328 81 3 0 chr5 37068920 37069218 -162560932 - AluY SINE Alu -12 299 1 1001 242 239 46 chr5 37069218 37069272 -162560878 + MLT1E1 LTR MaLR 612 654 0 265 267 0 13 chr5 37069860 37069935 -162560215 + MLT1I LTR MaLR 118 191 -218 254 240 40 13 chr5 37070087 37070162 -162559988 + MLT1I LTR MaLR 320 396 -13 1439 239 48 50 chr5 37070432 37070930 -162559220 + MLT1D LTR MaLR 1 497 -8 998 237 42 55 chr5 37070990 37071302 -162558848 + MLT1E2 LTR MaLR 311 618 -8 283 207 167 66 chr5 37071335 37071533 -162558617 - HAL1 LINE L1 -292 2215 1998 360 339 89 26 chr5 37071741 37072045 -162558105 - HAL1 LINE L1 -811 1696 1374 646 330 109 50 chr5 37072296 37072754 -162557396 + L2 LINE L2 2829 3313 0 305 355 93 17 chr5 37072769 37072941 -162557209 - HAL1 LINE L1 -1680 827 643 21 36 0 0 chr5 37073729 37073757 -162556393 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 37075089 37075121 -162555029 + AT_rich Low_complexity Low_complexity 1 32 0 225 254 34 17 chr5 37075330 37075389 -162554761 + MLT1E LTR MaLR 3 62 -562 993 274 69 29 chr5 37075472 37075851 -162554299 + MLT1E LTR MaLR 200 593 0 3606 93 309 0 chr5 37076463 37077094 -162553056 - LTR12 LTR ERV1 0 826 1 1721 155 17 0 chr5 37077547 37077844 -162552306 - AluSq SINE Alu -11 302 1 1012 206 14 37 chr5 37078555 37078757 -162551393 + MER58A DNA MER1_type 12 210 -2210 2422 58 0 0 chr5 37078757 37079052 -162551098 + AluY SINE Alu 1 295 -16 1012 206 14 37 chr5 37079052 37079067 -162551083 + MER58A DNA MER1_type 210 224 0 23 0 0 0 chr5 37079541 37079564 -162550586 + AT_rich Low_complexity Low_complexity 1 23 0 242 273 122 50 chr5 37079799 37079938 -162550212 - LTR1B LTR ERV1 -74 752 604 * 1991 102 14 7 chr5 37079935 37080228 -162549922 + THE1B LTR MaLR 70 364 0 319 225 8 100 chr5 37080228 37080348 -162549802 + MER67C LTR ERV1 295 403 -307 2366 41 41 3 chr5 37080612 37080904 -162549246 + AluY SINE Alu 1 303 -8 25 51 0 0 chr5 37081209 37081248 -162548902 + AT_rich Low_complexity Low_complexity 1 39 0 1877 280 63 3 chr5 37081499 37082088 -162548062 - MLT1E2 LTR MaLR 0 626 3 27 29 0 0 chr5 37083055 37083089 -162547061 + AT_rich Low_complexity Low_complexity 1 34 0 232 226 38 0 chr5 37084827 37084880 -162545270 - L1MD3 LINE L1 -1328 6667 6613 230 303 11 0 chr5 37084854 37084943 -162545207 - L1MC4 LINE L1 -1339 6703 6614 * 216 0 0 0 chr5 37084926 37084950 -162545200 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 869 237 14 3 chr5 37085598 37085872 -162544278 - MER74C LTR ERVL -20 440 88 540 293 142 13 chr5 37085868 37086107 -162544043 + MLT2B1 LTR ERVL 157 426 -94 * 4701 30 4 0 chr5 37086264 37086854 -162543296 + L1PA3 LINE L1 5585 6176 0 25 65 0 0 chr5 37087301 37087347 -162542803 + AT_rich Low_complexity Low_complexity 1 46 0 279 252 34 50 chr5 37088146 37088265 -162541885 + MLT1J1 LTR MaLR 286 402 -44 1503 181 10 45 chr5 37088563 37088877 -162541273 + AluJb SINE Alu 1 303 -9 389 274 27 41 chr5 37088989 37089135 -162541015 - MIR SINE MIR -11 251 108 1547 193 94 23 chr5 37089135 37089487 -162540663 + MLT1B LTR MaLR 1 377 -13 199 246 0 18 chr5 37089523 37089580 -162540570 - MIR SINE MIR -150 112 57 2196 137 0 0 chr5 37090363 37090670 -162539480 + AluSc SINE Alu 1 307 -2 2362 141 6 3 chr5 37091265 37091628 -162538522 - THE1B LTR MaLR 0 364 1 9793 124 49 5 chr5 37091629 37093115 -162537035 - THE1B-int LTR MaLR -28 1552 1 2436 125 5 16 chr5 37093115 37093483 -162536667 - THE1B LTR MaLR 0 364 1 522 299 28 6 chr5 37093778 37093955 -162536195 + MER20 DNA MER1_type 4 184 -35 435 198 8 16 chr5 37094945 37095071 -162535079 + GA-rich Low_complexity Low_complexity 3 127 0 195 186 0 0 chr5 37095225 37095268 -162534882 + GA-rich Low_complexity Low_complexity 2 44 0 2068 70 21 3 chr5 37095306 37095590 -162534560 - L1PA7 LINE L1 -3 6151 5863 2630 257 187 40 chr5 37096615 37097826 -162532324 + L1M2b LINE L1 1 1388 -5821 238 356 58 0 chr5 37098524 37098628 -162531522 + L1M2b LINE L1 1216 1325 -5884 7758 219 63 22 chr5 37098628 37101304 -162528846 + L1M2 LINE L1 787 3574 -3274 9953 199 73 24 chr5 37201312 37202184 -162427966 + L1MC1 LINE L1 50 878 -5548 419 122 61 0 chr5 37202184 37202266 -162427884 - L1PA13 LINE L1 -1 6162 6076 9953 199 73 24 chr5 37202266 37203971 -162426179 + L1MC1 LINE L1 878 2772 -3654 242 129 24 5 chr5 37203979 37204031 -162426119 - THE1A LTR MaLR -259 96 45 1179 247 11 39 chr5 37204072 37204432 -162425718 + L1MC1 LINE L1 4796 5145 -1281 1783 223 49 22 chr5 37204443 37204502 -162425648 - MSTB1 LTR MaLR -13 419 363 1916 154 36 36 chr5 37204502 37204866 -162425284 - THE1B LTR MaLR 0 364 1 1783 223 49 22 chr5 37204866 37205214 -162424936 - MSTB1 LTR MaLR -69 363 1 4542 189 64 36 chr5 37205223 37205999 -162424151 + L1MC1 LINE L1 5151 5986 -627 1846 191 57 24 chr5 37205999 37206417 -162423733 - MSTB1 LTR MaLR 0 432 1 4542 189 64 36 chr5 37206417 37207064 -162423086 + L1MC1 LINE L1 5986 6613 0 448 283 194 35 chr5 37207773 37208140 -162422010 - L2 LINE L2 0 3313 2889 26 30 0 0 chr5 37208221 37208254 -162421896 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 37209002 37209025 -162421125 + AT_rich Low_complexity Low_complexity 1 23 0 1421 128 0 0 chr5 37210534 37210745 -162419405 + AluSp SINE Alu 101 311 -2 23 86 0 0 chr5 37210887 37210945 -162419205 + AT_rich Low_complexity Low_complexity 1 58 0 958 65 16 0 chr5 37213103 37213227 -162416923 - AluSg/x SINE Alu -15 295 170 226 291 23 23 chr5 37213734 37213820 -162416330 - MLT1J2 LTR MaLR -22 428 343 225 0 0 0 chr5 37214674 37214699 -162415451 + (T)n Simple_repeat Simple_repeat 1 25 0 2257 195 71 0 chr5 37214731 37215151 -162414999 + MER70A LTR ERVL 22 471 -1 441 282 53 24 chr5 37215923 37216093 -162414057 - MLT1J2 LTR MaLR -237 213 39 261 111 0 0 chr5 37217867 37217903 -162412247 - MLT2B1 LTR ERVL 0 520 485 2341 159 18 30 chr5 37218015 37218454 -162411696 + Tigger2a DNA MER2_type 1 434 0 1252 238 141 22 chr5 37218454 37218706 -162411444 - MLT2B1 LTR ERVL -67 453 232 2285 102 0 0 chr5 37218706 37219001 -162411149 + AluSq SINE Alu 3 297 -16 1252 238 141 22 chr5 37219001 37219151 -162410999 - MLT2B1 LTR ERVL -288 232 3 1048 248 128 19 chr5 37219209 37219784 -162410366 - MER45B DNA AcHobo -10 1030 310 2630 195 7 36 chr5 37219784 37220333 -162409817 + Tigger1 DNA MER2_type 1 533 -1885 1990 155 28 11 chr5 37220333 37220688 -162409462 + Tigger1 DNA MER2_type 755 1115 -1303 11793 213 41 19 chr5 37220698 37224412 -162405738 + L1MC/D LINE L1 2245 5877 -1065 2227 82 3 0 chr5 37224412 37224704 -162405446 + AluY SINE Alu 1 293 -18 11793 213 41 19 chr5 37224704 37224815 -162405335 + L1MC/D LINE L1 5877 5984 -958 1851 201 12 12 chr5 37224815 37224851 -162405299 + L1MA5 LINE L1 5894 5929 -371 264 91 0 0 chr5 37224851 37224895 -162405255 + (TTG)n Simple_repeat Simple_repeat 2 45 0 1851 201 12 12 chr5 37224895 37225255 -162404895 + L1MA5 LINE L1 5928 6300 0 11793 213 41 19 chr5 37225255 37225277 -162404873 + L1MC/D LINE L1 5984 6199 -743 21 36 0 0 chr5 37225835 37225863 -162404287 + AT_rich Low_complexity Low_complexity 1 28 0 1992 100 21 3 chr5 37226608 37226898 -162403252 + AluSg SINE Alu 1 295 -15 1603 187 101 61 chr5 37227877 37228353 -162401797 - MER50 LTR ERV1 0 734 240 238 157 20 39 chr5 37228463 37228514 -162401636 - MER50 LTR ERV1 -675 59 10 1570 158 55 68 chr5 37229043 37229423 -162400727 + THE1C LTR MaLR 1 375 0 27 49 0 0 chr5 37230725 37230766 -162399384 + AT_rich Low_complexity Low_complexity 1 41 0 2197 77 7 13 chr5 37231733 37232031 -162398119 - AluY SINE Alu -15 296 1 2155 187 9 18 chr5 37232071 37232509 -162397641 + Tigger2a DNA MER2_type 1 434 0 474 227 42 155 chr5 37232623 37233024 -162397126 - L1MD3 LINE L1 -10 7985 7630 1983 125 4 4 chr5 37233943 37234244 -162395906 + AluSc SINE Alu 1 301 0 23 0 0 0 chr5 37234345 37234368 -162395782 + AT_rich Low_complexity Low_complexity 1 23 0 315 294 55 18 chr5 37234566 37234729 -162395421 - L1ME1 LINE L1 -15 6151 5983 836 227 0 0 chr5 37234773 37234936 -162395214 + MLT1A1 LTR MaLR 1 163 -202 1408 212 90 113 chr5 37234938 37235505 -162394645 + MLT2B3 LTR ERVL 1 554 0 1188 177 10 5 chr5 37235505 37235707 -162394443 + MLT1A1 LTR MaLR 161 363 -2 625 294 50 23 chr5 37235707 37236262 -162393888 - L1ME1 LINE L1 -224 5942 5345 376 282 86 6 chr5 37236300 37236474 -162393676 - L1ME1 LINE L1 -861 5285 5098 316 181 42 14 chr5 37236491 37236563 -162393587 + MLT1B LTR MaLR 308 381 -9 29 60 0 0 chr5 37236716 37236766 -162393384 + AT_rich Low_complexity Low_complexity 1 50 0 1581 196 92 11 chr5 37237258 37237605 -162392545 + THE1C LTR MaLR 1 375 0 1761 218 3 0 chr5 37238134 37238455 -162391695 - MLT2B2 LTR ERVL -193 322 1 617 258 81 25 chr5 37238478 37238761 -162391389 + L1ME1 LINE L1 5765 6063 -103 24 32 0 0 chr5 37239932 37239963 -162390187 + AT_rich Low_complexity Low_complexity 1 31 0 229 271 71 0 chr5 37242006 37242091 -162388059 + L1ME LINE L1 5690 5780 -341 23 54 0 0 chr5 37242155 37242192 -162387958 + AT_rich Low_complexity Low_complexity 1 37 0 231 61 0 0 chr5 37242241 37242274 -162387876 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 618 131 0 10 chr5 37242285 37242384 -162387766 + MSTA LTR MaLR 1 98 -328 2285 79 41 0 chr5 37242396 37242688 -162387462 - AluY SINE Alu -2 309 6 2181 143 20 17 chr5 37242696 37243054 -162387096 - THE1B LTR MaLR -5 359 1 5423 106 1 5 chr5 37243054 37243791 -162386359 - THE1B-int LTR MaLR 0 1580 847 4682 92 1 44 chr5 37243791 37244489 -162385661 - THE1B-int LTR MaLR -910 670 3 2013 141 33 28 chr5 37244491 37244853 -162385297 - THE1B LTR MaLR 0 364 1 1554 195 14 17 chr5 37244870 37245167 -162384983 + MSTA LTR MaLR 133 428 0 8364 179 33 36 chr5 37245175 37245530 -162384620 + MSTA-int LTR MaLR 10 365 -1286 2330 86 3 3 chr5 37245530 37245822 -162384328 - AluY SINE Alu -19 292 1 8364 179 33 36 chr5 37245822 37247113 -162383037 + MSTA-int LTR MaLR 365 1651 0 2121 173 58 15 chr5 37247113 37247523 -162382627 + MSTA LTR MaLR 1 428 0 204 163 0 0 chr5 37247564 37247607 -162382543 + (CA)n Simple_repeat Simple_repeat 1 43 0 1536 256 66 41 chr5 37247640 37247947 -162382203 + L1ME2 LINE L1 5298 5596 -568 1983 218 31 12 chr5 37247947 37248370 -162381780 + MSTB1 LTR MaLR 1 431 -1 1536 256 66 41 chr5 37248370 37248897 -162381253 + L1ME2 LINE L1 5596 6153 -11 276 233 17 0 chr5 37250820 37250880 -162379270 - MIR SINE MIR -135 127 67 2012 101 0 7 chr5 37251786 37252134 -162378016 - AluSc SINE Alu 0 352 7 1620 110 0 0 chr5 37252626 37252844 -162377306 - AluSq SINE Alu -95 218 1 2334 171 20 22 chr5 37253054 37253551 -162376599 - L1MB3 LINE L1 -3 6180 5685 22 35 0 0 chr5 37254010 37254039 -162376111 + AT_rich Low_complexity Low_complexity 1 29 0 26 50 0 0 chr5 37255427 37255467 -162374683 + AT_rich Low_complexity Low_complexity 1 40 0 1938 143 48 28 chr5 37255809 37256166 -162373984 - THE1B LTR MaLR 0 364 1 10344 121 31 5 chr5 37256166 37257700 -162372450 - THE1C-int LTR MaLR 0 1580 6 2104 127 38 24 chr5 37257705 37258075 -162372075 - THE1C LTR MaLR 0 375 1 251 383 86 0 chr5 37258863 37259025 -162371125 + L2 LINE L2 1846 2021 -1293 321 315 0 22 chr5 37259749 37259841 -162370309 - L2 LINE L2 -33 3280 3191 2531 46 3 3 chr5 37260469 37260776 -162369374 - AluY SINE Alu -4 307 1 358 200 3 16 chr5 37261138 37261221 -162368929 + MER21A LTR ERV1 1 83 -780 453 197 16 88 chr5 37261322 37261506 -162368644 + MER21A LTR ERV1 74 310 -397 1218 169 35 28 chr5 37261511 37261766 -162368384 + MLT2A2 LTR ERVL 1 257 -196 1823 126 11 8 chr5 37261786 37262047 -162368103 - AluSx SINE Alu -45 267 6 756 244 122 13 chr5 37262078 37262307 -162367843 + MLT2B3 LTR ERVL 255 508 -46 2852 209 13 107 chr5 37262380 37263203 -162366947 + MER21A LTR ERV1 159 904 -27 2676 109 41 5 chr5 37263237 37263649 -162366501 + MSTA LTR MaLR 1 427 -1 210 324 29 37 chr5 37264681 37264817 -162365333 - MER5A DNA MER1_type -23 166 32 4401 130 3 31 chr5 37264870 37265517 -162364633 - L1PA12 LINE L1 0 6168 5573 1896 159 23 0 chr5 37265517 37265643 -162364507 + AluSx SINE Alu 1 123 -189 450 0 0 0 chr5 37265643 37265693 -162364457 + (CA)n Simple_repeat Simple_repeat 2 51 0 1896 159 23 0 chr5 37265693 37265868 -162364282 + AluSx SINE Alu 123 309 -3 4401 130 3 31 chr5 37265868 37266071 -162364079 - L1PA12 LINE L1 -595 5573 5366 2292 184 0 0 chr5 37266076 37266495 -162363655 + L1P LINE L1 4462 4880 -1266 1694 183 7 90 chr5 37266782 37267140 -162363010 - MLT2C1 LTR ERVL -1 396 79 1939 149 0 3 chr5 37267140 37267435 -162362715 - AluSq SINE Alu -19 294 1 1694 183 7 90 chr5 37267435 37267508 -162362642 - MLT2C1 LTR ERVL -318 79 1 868 148 14 32 chr5 37268184 37268532 -162361618 + ERVL-D LTR ERVL 5270 5757 0 1776 174 21 72 chr5 37268532 37268963 -162361187 + MLT2D LTR ERVL 1 409 -5 23 0 0 0 chr5 37270957 37270980 -162359170 + AT_rich Low_complexity Low_complexity 1 23 0 1301 269 111 39 chr5 37271552 37272457 -162357693 - L1ME3 LINE L1 -55 6107 5134 1740 305 72 4 chr5 37272485 37273223 -162356927 - L1ME1 LINE L1 -5 6161 5374 1991 150 46 9 chr5 37323461 37323808 -162306342 - THE1-int LTR MaLR -259 1321 962 1493 224 57 5 chr5 37324244 37324627 -162305523 + MLT1C LTR MaLR 65 467 0 405 227 93 47 chr5 37324627 37324776 -162305374 - MARNA DNA Mariner -118 468 313 2466 111 6 0 chr5 37324789 37325142 -162305008 - THE1A LTR MaLR 0 355 1 2138 131 0 3 chr5 37325177 37325491 -162304659 - AluSq SINE Alu 0 313 1 361 345 47 0 chr5 37325546 37325717 -162304433 - MIR SINE MIR -6 256 78 1849 278 76 34 chr5 37326909 37327782 -162302368 + L1ME3A LINE L1 5257 6165 -5 2164 24 0 0 chr5 37328386 37328640 -162301510 + L1PA2 LINE L1 5902 6155 0 201 111 0 56 chr5 37328864 37328900 -162301250 + (TAG)n Simple_repeat Simple_repeat 1 34 0 492 268 166 29 chr5 37328968 37329282 -162300868 + L1MCc LINE L1 1162 1518 -4905 331 287 68 40 chr5 37329615 37330012 -162300138 + L1MCc LINE L1 1961 2368 -4754 24 67 0 0 chr5 37330144 37330189 -162299961 + AT_rich Low_complexity Low_complexity 1 45 0 316 153 34 0 chr5 37330994 37331053 -162299097 - L1M4 LINE L1 -3124 3022 2962 1470 98 5 0 chr5 37331536 37331751 -162298399 - L1P LINE L1 -3368 2778 2563 928 208 84 60 chr5 37332083 37332367 -162297783 - MLT1B LTR MaLR -89 301 11 745 275 66 25 chr5 37332603 37333069 -162297081 + L1MCc LINE L1 2839 3288 -3653 1750 309 77 17 chr5 37333070 37334401 -162295749 + L1MCc LINE L1 3868 5278 -1663 791 241 19 11 chr5 37334410 37334726 -162295424 + MLT1A1 LTR MaLR 1 365 0 811 311 102 33 chr5 37334726 37335325 -162294825 + L1MCc LINE L1 5286 5925 -1016 275 175 65 21 chr5 37335428 37335523 -162294627 + L1ME LINE L1 5665 5763 -399 2748 133 28 7 chr5 37335525 37335921 -162294229 + MLT2A1 LTR ERVL 1 408 -36 315 0 0 0 chr5 37335921 37335956 -162294194 + (CA)n Simple_repeat Simple_repeat 2 36 0 2748 133 28 7 chr5 37335956 37335994 -162294156 + MLT2A1 LTR ERVL 408 444 0 28705 82 9 4 chr5 37336006 37340029 -162290121 + HERVL-A1 LTR ERVL 2 4044 -1610 1690 209 31 38 chr5 37340254 37340671 -162289479 - MER47B DNA MER2_type -4 414 1 195 299 45 15 chr5 37340833 37340900 -162289250 - L2 LINE L2 0 3313 3245 1982 238 51 9 chr5 37341184 37341637 -162288513 + MER70A LTR ERVL 1 472 0 344 286 77 0 chr5 37341735 37341826 -162288324 - MER58A DNA MER1_type -5 102 5 199 288 12 12 chr5 37341852 37341932 -162288218 - MER5C DNA MER1_type -46 278 199 1428 97 15 0 chr5 37342332 37342538 -162287612 - L1PA7 LINE L1 -2 6152 5944 1536 152 17 0 chr5 37342667 37342904 -162287246 + AluSg SINE Alu 54 294 -16 21 0 0 0 chr5 37343159 37343180 -162286970 + AT_rich Low_complexity Low_complexity 1 21 0 342 263 93 8 chr5 37343717 37343835 -162286315 + L2 LINE L2 3169 3296 -17 214 296 63 42 chr5 37344693 37344790 -162285360 + L2 LINE L2 3164 3266 -47 2104 122 3 7 chr5 37344790 37345094 -162285056 + AluSq SINE Alu 1 303 -10 214 296 63 42 chr5 37345094 37345138 -162285012 + L2 LINE L2 3266 3308 -5 1942 141 11 0 chr5 37345182 37345479 -162284671 + AluSx SINE Alu 3 302 0 305 295 36 27 chr5 37345798 37345910 -162284240 - MIR SINE MIR -63 145 33 922 299 103 19 chr5 37345914 37346544 -162283606 + L2 LINE L2 2523 3223 -90 717 214 0 8 chr5 37346613 37346744 -162283406 - FLAM_A SINE Alu -3 130 1 451 240 99 24 chr5 37346975 37347251 -162282899 + L1MC/D LINE L1 5545 5852 -299 2443 174 41 30 chr5 37347327 37348053 -162282097 + L1M4 LINE L1 4927 5666 -508 1596 167 36 14 chr5 37348053 37348353 -162281797 - AluJb SINE Alu 0 306 1 2443 174 41 30 chr5 37348353 37348503 -162281647 + L1M4 LINE L1 5666 5813 -361 18886 139 19 89 chr5 37348865 37352915 -162277235 - L1P LINE L1 -2366 3780 12 22 35 0 0 chr5 37354298 37354327 -162275823 + AT_rich Low_complexity Low_complexity 1 29 0 32 43 0 0 chr5 37354566 37354612 -162275538 + AT_rich Low_complexity Low_complexity 1 46 0 780 22 0 0 chr5 37354694 37354786 -162275364 + L1PA7 LINE L1 6060 6151 -3 25 0 0 0 chr5 37355412 37355437 -162274713 + AT_rich Low_complexity Low_complexity 1 25 0 239 212 76 15 chr5 37357075 37357141 -162273009 + L1M4 LINE L1 5739 5808 -366 2631 205 68 31 chr5 37357357 37357997 -162272153 + L1MB8 LINE L1 5431 6101 -77 1450 175 33 75 chr5 37357997 37358357 -162271793 + MER7A DNA MER2_type 4 346 0 2631 205 68 31 chr5 37358357 37358422 -162271728 + L1MB8 LINE L1 6101 6162 -16 230 140 0 20 chr5 37358431 37358481 -162271669 - LTR66 LTR ERVL -172 438 390 23 33 0 0 chr5 37359176 37359206 -162270944 + AT_rich Low_complexity Low_complexity 1 30 0 414 69 0 0 chr5 37359732 37359790 -162270360 + (GA)n Simple_repeat Simple_repeat 2 59 0 11430 150 104 32 chr5 37359790 37359851 -162270299 - Tigger1 DNA MER2_type -1 2417 2362 2653 52 0 0 chr5 37359851 37360159 -162269991 - AluY SINE Alu -2 309 2 11430 150 104 32 chr5 37360159 37360187 -162269963 - Tigger1 DNA MER2_type -56 2362 2337 1839 181 29 54 chr5 37360187 37360630 -162269520 + MSTB1 LTR MaLR 1 432 0 11430 150 104 32 chr5 37360630 37361420 -162268730 - Tigger1 DNA MER2_type -81 2337 1605 2017 117 14 3 chr5 37361420 37361703 -162268447 + AluSx SINE Alu 1 286 -26 11430 150 104 32 chr5 37361703 37363075 -162267075 - Tigger1 DNA MER2_type -813 1605 2 1630 204 20 52 chr5 37363247 37363650 -162266500 + MLT1B LTR MaLR 1 390 0 4471 216 19 18 chr5 37364252 37364699 -162265451 - L1 LINE L1 -2095 4051 3606 297 0 0 0 chr5 37364699 37364732 -162265418 + (TG)n Simple_repeat Simple_repeat 2 34 0 4471 216 19 18 chr5 37364732 37365411 -162264739 - L1 LINE L1 -2540 3606 2924 2665 81 6 0 chr5 37365858 37366204 -162263946 - THE1A LTR MaLR -2 353 6 10590 116 14 10 chr5 37366209 37367782 -162262368 - THE1A-int LTR MaLR 0 1580 2 283 128 58 0 chr5 37368071 37368157 -162261993 + (TA)n Simple_repeat Simple_repeat 2 92 0 1464 178 96 37 chr5 37368986 37369340 -162260810 + THE1C LTR MaLR 1 375 0 7112 213 24 3 chr5 37369340 37370744 -162259406 + THE1C-int LTR MaLR 1 1433 -218 1885 139 14 3 chr5 37370744 37371032 -162259118 - MER50-int LTR ERV1 -6908 297 7 2170 153 49 8 chr5 37371032 37371399 -162258751 - MER50 LTR ERV1 -12 722 341 1499 164 143 0 chr5 37371404 37371684 -162258466 + L1PA16 LINE L1 5838 6157 -9 880 36 9 0 chr5 37371706 37371818 -162258332 - MLT2C2 LTR ERVL -351 113 1 293 213 83 102 chr5 37371992 37372100 -162258050 - L2 LINE L2 -12 3301 3196 634 259 117 13 chr5 37372703 37372942 -162257208 - LTR16B LTR ERVL -153 311 48 224 109 0 43 chr5 37373205 37373251 -162256899 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 3256 115 17 46 chr5 37373722 37374354 -162255796 - MER4B LTR ERV1 0 779 1 2607 85 90 8 chr5 37375259 37375646 -162254504 + MER4C LTR ERV1 47 465 0 1562 144 117 7 chr5 37375650 37375948 -162254202 + MER4C-int LTR ERV1 2 332 -6266 746 134 183 30 chr5 37375948 37376112 -162254038 - MER4C LTR ERV1 0 465 277 1347 310 66 98 chr5 37376128 37376567 -162253583 - MER4A LTR ERV1 -239 425 1 3194 144 57 48 chr5 37376757 37377787 -162252363 + MER4-int LTR ERV1 1756 2485 -4113 1149 188 57 71 chr5 37377163 37377241 -162252909 + LTR57-int LTR ERVL 988 1066 -4277 * 2238 121 3 0 chr5 37377241 37377548 -162252602 + AluSq SINE Alu 1 308 -5 1149 188 57 71 chr5 37377548 37377836 -162252314 + LTR57-int LTR ERVL 1066 1349 -3994 276 130 0 72 chr5 37377813 37377882 -162252268 + MER4-int LTR ERV1 1764 1827 -4931 * 547 104 42 21 chr5 37377882 37377978 -162252172 + MER4A LTR ERV1 1 98 -566 1698 135 37 39 chr5 37377978 37378319 -162251831 + MER4A LTR ERV1 261 664 0 2666 79 54 52 chr5 37378322 37378820 -162251330 + MER4A-int LTR ERV1 1 559 -6039 3840 141 21 44 chr5 37378829 37379774 -162250376 + MER4-int LTR ERV1 192 1170 -5588 4251 91 57 13 chr5 37379790 37380491 -162249659 + MER4-int LTR ERV1 1764 2495 -4103 1152 162 127 0 chr5 37380491 37380719 -162249431 - LTR8 LTR ERV1 -434 257 1 15546 111 61 37 chr5 37380719 37380911 -162249239 + MER4-int LTR ERV1 1862 2048 -4550 2346 96 0 0 chr5 37380911 37381203 -162248947 - AluSg SINE Alu -18 292 1 15546 111 61 37 chr5 37381203 37383137 -162247013 + MER4-int LTR ERV1 2048 3933 -2665 2238 79 10 14 chr5 37383137 37383428 -162246722 + AluY SINE Alu 5 294 -17 15546 111 61 37 chr5 37383428 37383750 -162246400 + MER4-int LTR ERV1 3933 4246 -2352 2149 118 0 0 chr5 37383750 37384038 -162246112 + AluSx SINE Alu 13 300 -12 15546 111 61 37 chr5 37384038 37384590 -162245560 + MER4-int LTR ERV1 4246 4783 -1815 7356 34 29 2 chr5 37384590 37385464 -162244686 - MER11D LTR ERVK 0 897 1 15546 111 61 37 chr5 37385464 37385639 -162244511 + MER4-int LTR ERV1 4783 6594 -4 464 128 29 69 chr5 37385649 37385751 -162244399 + MER4A LTR ERV1 1 98 -566 1754 144 17 25 chr5 37385751 37386099 -162244051 + MER4A LTR ERV1 261 664 0 1078 119 4 73 chr5 37386099 37386360 -162243790 + MER4E-int LTR ERV1 1824 2066 -4692 * 10239 154 28 31 chr5 37386359 37388179 -162241971 + MER4E-int LTR ERV1 4218 6012 -586 1471 202 14 14 chr5 37388179 37388471 -162241679 + AluJb SINE Alu 1 292 -20 10239 154 28 31 chr5 37388471 37389052 -162241098 + MER4E-int LTR ERV1 6012 6593 -5 2420 80 10 0 chr5 37389065 37389367 -162240783 + AluY SINE Alu 1 305 -6 1579 74 30 89 chr5 37389378 37389647 -162240503 + MER4C LTR ERV1 1 253 -212 1947 143 76 25 chr5 37389648 37390005 -162240145 - THE1C LTR MaLR 0 375 1 4316 194 7 36 chr5 37390009 37390980 -162239170 - THE1-int LTR MaLR -4 1731 711 1897 180 22 23 chr5 37390980 37391373 -162238777 - MLT2A2 LTR ERVL -144 309 1 611 263 26 6 chr5 37391389 37391545 -162238605 + MER69B DNA AcHobo 514 672 -554 2254 188 39 11 chr5 37391545 37391986 -162238164 + MER4E LTR ERV1 1 453 -326 198 0 0 0 chr5 37391986 37392008 -162238142 + (TTA)n Simple_repeat Simple_repeat 3 24 0 38910 88 6 9 chr5 37392008 37398157 -162231993 - L1PA6 LINE L1 -18 6136 11 2023 119 9 47 chr5 37398165 37398508 -162231642 + MER4E LTR ERV1 436 765 -14 2109 148 0 0 chr5 37398508 37398805 -162231345 - AluSx SINE Alu -15 297 1 1741 225 28 33 chr5 37398850 37399308 -162230842 + MLT1C LTR MaLR 10 465 -2 1614 211 51 73 chr5 37399308 37399639 -162230511 + MER69B DNA AcHobo 682 1019 -1507 1860 181 0 0 chr5 37399639 37399942 -162230208 + AluJb SINE Alu 2 304 -8 1614 211 51 73 chr5 37399942 37399991 -162230159 + MER69B DNA AcHobo 1019 1068 -1458 1754 183 18 50 chr5 37399991 37400374 -162229776 - MER93b LTR ERV1 -2 371 1 1614 211 51 73 chr5 37400374 37400388 -162229762 + MER69B DNA AcHobo 1068 1081 -1445 1769 206 90 38 chr5 37400388 37400761 -162229389 + MLT1D LTR MaLR 1 406 -99 2030 122 3 16 chr5 37400761 37401065 -162229085 + AluSx SINE Alu 1 300 -12 1769 206 90 38 chr5 37401065 37401171 -162228979 + MLT1D LTR MaLR 406 505 0 1614 211 51 73 chr5 37401171 37401321 -162228829 + MER69B DNA AcHobo 1081 1216 -10 349 163 0 0 chr5 37401769 37401818 -162228332 + AluSq SINE Alu 9 57 -246 2259 88 0 55 chr5 37401819 37402147 -162228003 + AluY SINE Alu 2 311 0 1658 116 0 29 chr5 37402150 37402391 -162227759 + AluSq SINE Alu 44 277 -36 832 58 33 0 chr5 37402396 37402517 -162227633 + (GAAA)n Simple_repeat Simple_repeat 3 127 0 2277 68 0 0 chr5 37403621 37403925 -162226225 + AluY SINE Alu 1 304 0 1045 142 6 11 chr5 37403974 37404150 -162226000 + AluJb SINE Alu 122 296 -16 1373 185 133 24 chr5 37404408 37404738 -162225412 + MER93b LTR ERV1 6 371 -2 198 71 0 0 chr5 37405012 37405040 -162225110 + (TA)n Simple_repeat Simple_repeat 2 29 0 7044 70 11 2 chr5 37405040 37406632 -162223518 - L1PA7 LINE L1 -3 6151 4548 1260 54 0 0 chr5 37406632 37406780 -162223370 - AluY SINE Alu -12 299 152 27401 114 9 71 chr5 37406780 37411637 -162218513 - L1PA7 LINE L1 -1593 4553 1 2081 124 3 0 chr5 37411665 37411955 -162218195 - AluSx SINE Alu -21 291 1 269 264 100 55 chr5 37411958 37412068 -162218082 - L1MC/D LINE L1 -2124 5684 5570 304 330 29 0 chr5 37412479 37412582 -162217568 - MIR SINE MIR -135 127 22 337 188 109 59 chr5 37412589 37412617 -162217533 - MIR SINE MIR 0 262 237 1583 172 89 56 chr5 37412617 37412954 -162217196 - MER7A DNA MER2_type 0 346 1 337 188 109 59 chr5 37412954 37413026 -162217124 - MIR SINE MIR -25 237 157 876 235 79 20 chr5 37413026 37413311 -162216839 - LTR16C LTR ERVL -2 481 193 470 244 87 8 chr5 37413484 37413611 -162216539 - MIR SINE MIR -122 140 4 259 217 121 0 chr5 37413790 37413873 -162216277 - MER5A DNA MER1_type 0 189 97 484 133 10 20 chr5 37414315 37414413 -162215737 + CT-rich Low_complexity Low_complexity 3 99 0 641 186 0 0 chr5 37414416 37414518 -162215632 - FLAM_A SINE Alu -20 122 21 298 222 42 0 chr5 37414542 37414614 -162215536 - MER5A DNA MER1_type -80 109 35 292 196 98 54 chr5 37415210 37415302 -162214848 - L2 LINE L2 -7 3306 3211 327 150 0 0 chr5 37415326 37415386 -162214764 + (TG)n Simple_repeat Simple_repeat 1 60 0 1149 249 52 64 chr5 37416231 37416765 -162213385 + PABL_B LTR ERV1 1 667 0 2324 97 0 13 chr5 37417193 37417493 -162212657 + AluSx SINE Alu 1 296 -16 2827 102 11 5 chr5 37417985 37418358 -162211792 - THE1C LTR MaLR 0 375 1 209 259 0 0 chr5 37418497 37418551 -162211599 - MIR SINE MIR -105 157 104 437 266 54 58 chr5 37418742 37418976 -162211174 - L1M4 LINE L1 -1300 4846 4612 2218 106 17 0 chr5 37418976 37419277 -162210873 + AluSp SINE Alu 1 306 -7 437 266 54 58 chr5 37419277 37419301 -162210849 - L1M4 LINE L1 -1534 4612 4589 1844 151 3 19 chr5 37419334 37419685 -162210465 - MER4A LTR ERV1 0 664 261 578 141 10 20 chr5 37419685 37419784 -162210366 - MER4A LTR ERV1 -566 98 1 1820 102 16 12 chr5 37419823 37420077 -162210073 + L1PA10 LINE L1 5911 6165 -3 16362 107 55 21 chr5 37420094 37420271 -162209879 - MER4A-int LTR ERV1 -18 6580 6410 2109 120 0 20 chr5 37420271 37420593 -162209557 + AluSq SINE Alu 1 313 0 16362 107 55 21 chr5 37420593 37423069 -162207081 - MER4A-int LTR ERV1 -188 6410 3837 4483 121 81 24 chr5 37423068 37423960 -162206190 - MER4A-int LTR ERV1 -2917 3681 2739 * 1254 183 70 4 chr5 37423962 37424203 -162205947 + LTR8 LTR ERV1 1 257 -434 740 118 16 24 chr5 37424203 37424330 -162205820 - MER4A-int LTR ERV1 -4103 2495 2370 6720 84 52 0 chr5 37424330 37425183 -162204967 - MER11D LTR ERVK 0 897 1 39966 42 5 3 chr5 37425183 37427102 -162203048 - HERVK11D LTR ERVK 0 7752 5838 2402 76 7 0 chr5 37427102 37427405 -162202745 + AluY SINE Alu 1 305 -6 39966 42 5 3 chr5 37427405 37431020 -162199130 - HERVK11D LTR ERVK -1914 5838 1 7168 88 10 1 chr5 37431020 37431909 -162198241 - MER11D LTR ERVK 0 897 1 341 118 0 0 chr5 37431909 37431960 -162198190 - MER4A-int LTR ERV1 -3487 1528 1478 * 1243 144 35 0 chr5 37431954 37432156 -162197994 - MER4A-int LTR ERV1 -4024 991 783 11343 136 21 22 chr5 37432182 37435157 -162194993 + L1P3 LINE L1 10 2998 -3463 11195 97 15 15 chr5 37435257 37435419 -162194731 + L1P3 LINE L1 3518 3679 -2782 180 0 0 0 chr5 37435419 37435439 -162194711 + (CA)n Simple_repeat Simple_repeat 2 21 0 11195 97 15 15 chr5 37435439 37436924 -162193226 + L1P3 LINE L1 3679 5164 -1297 1214 199 91 62 chr5 37436899 37437251 -162192899 + L1MD3 LINE L1 7904 8265 -45 * 2182 87 21 3 chr5 37437275 37437561 -162192589 - AluSx SINE Alu -21 291 1 1721 166 19 80 chr5 37438153 37438568 -162191582 + LTR9 LTR ERV1 1 390 -222 564 212 76 56 chr5 37438537 37438821 -162191329 + LTR19C LTR ERV1 316 779 0 * 1613 138 25 28 chr5 37439107 37439390 -162190760 - LTR23 LTR ERV1 0 437 156 38 0 0 0 chr5 37439669 37439707 -162190443 + AT_rich Low_complexity Low_complexity 1 38 0 953 236 98 41 chr5 37440258 37440627 -162189523 + MLT1B LTR MaLR 1 390 0 1819 173 42 12 chr5 37441073 37441409 -162188741 + MSTB LTR MaLR 1 346 -80 442 232 26 68 chr5 37441443 37441625 -162188525 - LTR34 LTR ERV1 -246 453 187 * 1646 157 31 41 chr5 37441624 37441942 -162188208 - MER50 LTR ERV1 -22 712 398 1452 120 50 17 chr5 37441938 37442179 -162187971 - MER50 LTR ERV1 -485 249 1 * 1040 169 62 31 chr5 37442179 37442404 -162187746 + MLT1B LTR MaLR 159 390 0 2022 113 10 3 chr5 37442579 37442881 -162187269 + AluY SINE Alu 1 304 -7 393 278 146 7 chr5 37443076 37443220 -162186930 - MIR SINE MIR -6 256 93 5384 73 12 6 chr5 37443585 37444272 -162185878 + LTR8 LTR ERV1 1 691 0 855 226 103 148 chr5 37444358 37445076 -162185074 + LTR34 LTR ERV1 10 695 -4 3670 173 125 27 chr5 37445085 37445836 -162184314 + LTR1B LTR ERV1 2 826 0 1477 237 66 29 chr5 37446012 37446363 -162183787 - MLT1A2 LTR MaLR 0 396 1 277 291 55 55 chr5 37447132 37447242 -162182908 + MIR3 SINE MIR 45 154 -54 24 32 0 0 chr5 37447314 37447345 -162182805 + AT_rich Low_complexity Low_complexity 1 31 0 1608 118 175 48 chr5 37447794 37448228 -162181922 + MER1A DNA MER1_type 1 533 0 338 219 19 67 chr5 37448303 37448408 -162181742 - L2 LINE L2 -1 3312 3213 1817 129 7 39 chr5 37448416 37448748 -162181402 - AluSq SINE Alu 0 313 1 1964 150 30 122 chr5 37449822 37450282 -162179868 - MER47B DNA MER2_type 0 418 1 530 279 7 14 chr5 37450546 37450693 -162179457 - L3 LINE CR1 -251 1326 1181 599 311 192 17 chr5 37451037 37451397 -162178753 - L3 LINE CR1 -427 1150 728 476 281 41 63 chr5 37451537 37452046 -162178104 + L1ME4a LINE L1 5620 6117 -4 2291 101 0 0 chr5 37452978 37453284 -162176866 + AluSq SINE Alu 1 306 -7 313 198 73 83 chr5 37453298 37453394 -162176756 - L1ME4a LINE L1 -68 6053 5959 208 362 11 11 chr5 37453653 37453747 -162176403 - MIR SINE MIR -123 139 46 268 223 64 11 chr5 37453895 37453989 -162176161 + G-rich Low_complexity Low_complexity 4 102 0 264 77 0 0 chr5 37454302 37454341 -162175809 + (TG)n Simple_repeat Simple_repeat 2 40 0 1775 162 0 13 chr5 37455288 37455463 -162174687 - AluJo SINE Alu -6 306 135 1830 56 0 24 chr5 37455463 37455714 -162174436 - AluY SINE Alu -7 304 60 1775 162 0 13 chr5 37455714 37455846 -162174304 - AluJo SINE Alu -177 135 3 6067 57 26 1 chr5 37456044 37456812 -162173338 - L1PA7 LINE L1 -1 6153 5367 1842 228 6 0 chr5 37456867 37457226 -162172924 + MLT1A1 LTR MaLR 1 361 -4 29 28 0 0 chr5 37457226 37457262 -162172888 + AT_rich Low_complexity Low_complexity 1 36 0 623 221 43 43 chr5 37457729 37457892 -162172258 - MLT1H LTR MaLR 0 549 387 361 274 28 9 chr5 37457951 37458057 -162172093 + HAL1b LINE L1 395 502 -846 237 269 127 66 chr5 37458058 37458160 -162171990 + HAL1b LINE L1 536 630 -718 1789 190 65 14 chr5 37458160 37458528 -162171622 + MLT1B LTR MaLR 2 388 -2 237 269 127 66 chr5 37458528 37458622 -162171528 + HAL1b LINE L1 630 744 -604 1519 181 22 0 chr5 37458641 37458911 -162171239 + AluJb SINE Alu 1 276 -36 423 0 0 0 chr5 37458911 37458958 -162171192 + (TG)n Simple_repeat Simple_repeat 2 48 0 201 289 67 44 chr5 37459000 37459090 -162171060 + MIR SINE MIR 23 114 -94 2224 110 0 0 chr5 37460963 37461264 -162168886 - AluSq SINE Alu -12 301 1 273 298 119 0 chr5 37461427 37461511 -162168639 - L2 LINE L2 -41 3231 3138 899 221 94 9 chr5 37461550 37461763 -162168387 - MIR SINE MIR -27 235 5 233 367 75 7 chr5 37461917 37462064 -162168086 - L2 LINE L2 -337 2977 2821 1844 144 87 31 chr5 37462205 37462560 -162167590 + THE1C LTR MaLR 1 375 0 194 0 39 0 chr5 37463111 37463137 -162167013 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2109 99 0 0 chr5 37463142 37463424 -162166726 - AluSp SINE Alu -31 282 1 186 286 48 16 chr5 37463487 37463550 -162166600 - MIR SINE MIR -193 69 5 2500 240 105 17 chr5 37463967 37464631 -162165519 + MER97a DNA MER1_type? 1 750 -144 2258 78 3 0 chr5 37464631 37464924 -162165226 - AluSp SINE Alu -19 294 1 2500 240 105 17 chr5 37464924 37465066 -162165084 + MER97a DNA MER1_type? 750 878 -16 598 307 57 57 chr5 37465081 37465433 -162164717 + LTR33 LTR ERVL 3 354 -167 503 286 31 21 chr5 37465439 37465631 -162164519 - LTR33 LTR ERVL -2 519 326 440 285 124 11 chr5 37465661 37465847 -162164303 - LTR33 LTR ERVL -312 209 3 1687 243 155 16 chr5 37465893 37466473 -162163677 + LTR50 LTR ERVL 2 662 -133 497 293 20 20 chr5 37466477 37466627 -162163523 + MLT1J2 LTR MaLR 277 426 -24 663 65 0 0 chr5 37467803 37467896 -162162254 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 631 212 18 0 chr5 37467897 37468010 -162162140 - FLAM_C SINE Alu -27 116 2 2347 186 72 67 chr5 37468541 37468873 -162161277 + MLT1E2 LTR MaLR 1 339 -287 570 241 9 0 chr5 37468873 37468989 -162161161 + FLAM_A SINE Alu 1 117 -16 2347 186 72 67 chr5 37468989 37469279 -162160871 + MLT1E2 LTR MaLR 339 626 0 229 271 35 0 chr5 37469756 37469841 -162160309 + MER113 DNA MER1_type? 4 91 -430 1986 139 0 16 chr5 37469864 37470180 -162159970 - AluSx SINE Alu -1 311 1 222 372 36 44 chr5 37470476 37470613 -162159537 - L2 LINE L2 0 3272 3137 1139 205 37 118 chr5 37470750 37470899 -162159251 + MLT1G LTR MaLR 11 170 -360 2643 220 29 0 chr5 37470899 37471450 -162158700 - MLT1F1 LTR MaLR 0 567 1 1139 205 37 118 chr5 37471450 37471692 -162158458 + MLT1G LTR MaLR 170 300 -230 1889 177 28 17 chr5 37471692 37472053 -162158097 + MLT1A1 LTR MaLR 1 365 0 1139 205 37 118 chr5 37472053 37472151 -162157999 + MLT1G LTR MaLR 300 404 -126 469 332 58 10 chr5 37472209 37472417 -162157733 + MIR SINE MIR 1 218 -44 586 274 97 49 chr5 37472823 37473175 -162156975 + MLT1J LTR MaLR 132 450 0 738 316 9 0 chr5 37473709 37473934 -162156216 - MIR SINE MIR -16 246 20 613 211 58 18 chr5 37474051 37474222 -162155928 - L1ME3A LINE L1 -22 6148 5971 804 243 102 49 chr5 37475172 37475599 -162154551 + LTR33 LTR ERVL 15 521 0 939 67 0 0 chr5 37475949 37476069 -162154081 - AluSg/x SINE Alu -13 299 180 1787 142 34 7 chr5 37528385 37528680 -162101470 - AluJb SINE Alu -9 303 1 495 232 56 50 chr5 37528917 37529115 -162101035 + L1ME4a LINE L1 5921 6119 -2 662 195 36 67 chr5 37529653 37529848 -162100302 - MER53 DNA DNA 0 189 1 414 0 0 0 chr5 37529878 37529924 -162100226 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 1931 175 30 9 chr5 37529973 37530310 -162099840 + MER2 DNA MER2_type 1 344 0 342 305 29 0 chr5 37531015 37531120 -162099030 + MIR3 SINE MIR 78 185 -23 1730 155 0 0 chr5 37531385 37531636 -162098514 + AluSq SINE Alu 1 251 -62 253 268 12 37 chr5 37531795 37531877 -162098273 - L2 LINE L2 0 3313 3234 2192 170 61 42 chr5 37532053 37532511 -162097639 + MLT1C LTR MaLR 1 467 0 1713 142 61 24 chr5 37532512 37532808 -162097342 + AluJb SINE Alu 1 307 -5 282 290 70 23 chr5 37533479 37533611 -162096539 - MIR SINE MIR -58 150 6 376 235 60 100 chr5 37533791 37533864 -162096286 - MIR SINE MIR -51 211 137 1970 149 17 3 chr5 37533864 37534165 -162095985 - AluJb SINE Alu -6 306 2 376 235 60 100 chr5 37534165 37534291 -162095859 - MIR SINE MIR -125 137 20 403 296 114 11 chr5 37534319 37534495 -162095655 - MER117 DNA MER1_type 0 197 4 1426 96 0 0 chr5 37534577 37534774 -162095376 + L1PA14 LINE L1 5960 6156 -5 2105 146 0 0 chr5 37535005 37535307 -162094843 + AluSx SINE Alu 1 302 -10 331 248 179 14 chr5 37535317 37535462 -162094688 - MIR SINE MIR 0 262 94 630 244 61 83 chr5 37535668 37535898 -162094252 + MER115 DNA AcHobo 302 526 -167 529 241 71 50 chr5 37535997 37536138 -162094012 + MER117 DNA MER1_type 54 197 0 * 715 253 6 0 chr5 37536138 37536304 -162093846 + MER115 DNA AcHobo 526 692 -1 347 298 33 13 chr5 37536623 37536774 -162093376 + LTR67 LTR ERVL 387 540 -17 1545 199 80 17 chr5 37536934 37537286 -162092864 + MLT1A2 LTR MaLR 1 374 0 399 175 116 84 chr5 37539544 37539751 -162090399 - MER34 LTR ERV1 -5 739 347 202 259 49 25 chr5 37540177 37540258 -162089892 + L2 LINE L2 3227 3309 -4 340 298 85 64 chr5 37540320 37540649 -162089501 + L2 LINE L2 2210 2545 -769 2684 192 59 9 chr5 37540650 37541208 -162088942 + L1MB2 LINE L1 5577 6162 -9 2724 187 72 19 chr5 37541454 37542040 -162088110 - LTR27 LTR ERV1 -16 620 1 30 0 0 0 chr5 37542186 37542216 -162087934 + AT_rich Low_complexity Low_complexity 1 30 0 217 153 17 34 chr5 37542585 37542644 -162087506 + T-rich Low_complexity Low_complexity 2 59 0 2032 131 50 39 chr5 37543305 37543665 -162086485 + THE1B LTR MaLR 1 364 0 189 171 0 0 chr5 37543926 37543961 -162086189 + GA-rich Low_complexity Low_complexity 2 36 0 605 263 77 29 chr5 37544563 37544772 -162085378 + MIR SINE MIR 40 258 -4 2725 179 69 49 chr5 37545269 37545946 -162084204 - LTR8 LTR ERV1 0 691 1 649 236 11 73 chr5 37546248 37546439 -162083711 + MER97a DNA MER1_type? 1 179 -715 2814 96 0 16 chr5 37546503 37546879 -162083271 - LTR8 LTR ERV1 0 691 322 1815 161 167 65 chr5 37547093 37547238 -162082912 - LTR49 LTR ERV1 0 595 466 1725 180 10 7 chr5 37547238 37547538 -162082612 + AluJb SINE Alu 1 301 -11 1815 161 167 65 chr5 37547538 37547932 -162082218 - LTR49 LTR ERV1 -129 466 1 475 99 0 14 chr5 37548003 37548074 -162082076 + LTR26B LTR ERV1 1 70 -461 3807 115 21 23 chr5 37548074 37548640 -162081510 + MER61E LTR ERV1 1 565 -4 3893 160 64 10 chr5 37548658 37549333 -162080817 - MER50 LTR ERV1 -23 711 1 2910 162 0 11 chr5 37549333 37549795 -162080355 + LTR26B LTR ERV1 75 531 0 1601 175 39 44 chr5 37549795 37550132 -162080018 + MLT1C LTR MaLR 29 363 -104 2983 166 101 37 chr5 37550135 37550787 -162079363 + LTR8A LTR ERV1 34 727 0 652 157 9 17 chr5 37550788 37550903 -162079247 + MLT1C LTR MaLR 352 465 -2 2089 174 32 108 chr5 37550955 37551426 -162078724 - MER61E LTR ERV1 -43 526 92 430 213 56 86 chr5 37551413 37551649 -162078501 - MER61E LTR ERV1 -455 324 1 * 854 214 113 39 chr5 37551649 37552063 -162078087 - LTR56 LTR ERV1 -20 556 9 1396 193 52 137 chr5 37552692 37553107 -162077043 - MER34C LTR ERV1 -3 582 133 2252 108 7 0 chr5 37553107 37553414 -162076736 - AluSq SINE Alu -2 311 3 1396 193 52 137 chr5 37553414 37553483 -162076667 - MER34C LTR ERV1 -452 133 155 1955 134 31 0 chr5 37553483 37553774 -162076376 + AluSq SINE Alu 7 306 -7 1396 193 52 137 chr5 37553774 37553885 -162076265 - MER34C LTR ERV1 -429 156 37 601 246 90 37 chr5 37554191 37554435 -162075715 + MIR SINE MIR 6 262 0 890 269 8 16 chr5 37554453 37554698 -162075452 + MIR SINE MIR 20 262 0 2113 104 0 14 chr5 37554850 37555171 -162074979 - AluSx SINE Alu 0 317 1 23 0 0 0 chr5 37556017 37556040 -162074110 + AT_rich Low_complexity Low_complexity 1 23 0 240 206 78 128 chr5 37556669 37556810 -162073340 + LTR67 LTR ERVL 2 135 -422 596 286 30 5 chr5 37556948 37557147 -162073003 + LTR67 LTR ERVL 354 557 0 1030 154 0 0 chr5 37557502 37557658 -162072492 - MLT2B1 LTR ERVL 0 520 365 681 149 0 10 chr5 37557661 37557916 -162072234 + AluJ SINE Alu 11 311 -1 286 157 20 0 chr5 37557930 37557981 -162072169 - MLT1A1 LTR MaLR -313 52 1 4165 182 103 10 chr5 37557996 37558880 -162071270 - Charlie1a DNA MER1_type -489 966 1 1897 144 33 16 chr5 37559061 37559366 -162070784 - AluSx SINE Alu -2 310 1 452 290 145 5 chr5 37559389 37559589 -162070561 - MIR SINE MIR -4 258 31 476 292 25 6 chr5 37560077 37560238 -162069912 + MIR SINE MIR 28 191 -71 459 195 76 34 chr5 37560493 37560611 -162069539 - MER103 DNA DNA -1 165 43 1677 157 105 0 chr5 37560664 37560969 -162069181 + MER44D DNA MER2_type 1 607 -2 261 343 35 21 chr5 37561296 37561439 -162068711 - MIR3 SINE MIR -27 181 37 224 196 39 0 chr5 37562008 37562059 -162068091 + GA-rich Low_complexity Low_complexity 4 56 0 200 153 51 17 chr5 37562211 37562270 -162067880 + T-rich Low_complexity Low_complexity 5 65 0 2047 157 27 29 chr5 37563044 37563262 -162066888 - MLT1B LTR MaLR 0 390 172 1960 120 4 0 chr5 37563262 37563538 -162066612 - AluSx SINE Alu -2 310 34 2047 157 27 29 chr5 37563538 37563695 -162066455 - MLT1B LTR MaLR -218 172 16 221 355 53 33 chr5 37563764 37563916 -162066234 + MIR3 SINE MIR 17 171 -37 6700 60 5 0 chr5 37564176 37565168 -162064982 - HERVL LTR ERVL -360 5294 4257 1411 78 16 3 chr5 37565168 37565363 -162064787 - MLT2A1 LTR ERVL -201 213 1 239 284 34 0 chr5 37566740 37566828 -162063322 + MLT1C LTR MaLR 1 91 -376 * 524 191 0 9 chr5 37566825 37566930 -162063220 + MLT1C LTR MaLR 364 467 0 247 261 141 11 chr5 37567398 37567490 -162062660 + MIR SINE MIR 79 182 -80 1248 299 28 14 chr5 37568522 37568947 -162061203 + LTR16A LTR ERVL 16 446 -4 288 243 23 10 chr5 37569405 37569504 -162060646 + MIR SINE MIR 54 152 -66 800 288 107 30 chr5 37569581 37569974 -162060176 - L3 LINE CR1 -100 1477 1055 472 313 88 51 chr5 37570279 37570653 -162059497 - MLT1L LTR MaLR -227 388 1 2141 104 31 0 chr5 37570782 37571070 -162059080 + AluSx SINE Alu 1 297 -15 248 53 26 0 chr5 37571072 37571110 -162059040 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 894 186 0 0 chr5 37571113 37571253 -162058897 - AluJb SINE Alu -26 286 147 315 304 138 6 chr5 37571389 37571570 -162058580 - L3 LINE CR1 -355 1222 1018 21 82 0 0 chr5 37571587 37571636 -162058514 + AT_rich Low_complexity Low_complexity 1 49 0 205 195 49 122 chr5 37571884 37571940 -162058210 - L3 LINE CR1 -547 1030 980 2270 125 3 0 chr5 37571940 37572244 -162057906 - AluSq SINE Alu -8 305 1 205 195 49 122 chr5 37572244 37572269 -162057881 - L3 LINE CR1 -597 980 955 279 311 15 30 chr5 37572337 37572469 -162057681 - L3 LINE CR1 -673 904 775 214 255 0 0 chr5 37572702 37572749 -162057401 + (CA)n Simple_repeat Simple_repeat 1 47 0 453 127 0 0 chr5 37572764 37572835 -162057315 - MER41E LTR ERV1 -120 392 322 1373 212 21 65 chr5 37573032 37573414 -162056736 - MLT1A1 LTR MaLR 0 365 1 1768 183 3 13 chr5 37573467 37573779 -162056371 - AluJb SINE Alu -2 310 2 1965 184 91 16 chr5 37574812 37575241 -162054909 - MLT1C LTR MaLR 0 467 7 2182 127 0 13 chr5 37575352 37575668 -162054482 + AluSx SINE Alu 1 312 0 641 292 64 0 chr5 37575687 37575923 -162054227 + MIR SINE MIR 2 252 -10 2051 171 28 15 chr5 37576271 37576662 -162053488 + MSTD LTR MaLR 1 396 0 286 294 103 27 chr5 37576675 37576821 -162053329 - MIR SINE MIR -65 197 41 2397 92 16 0 chr5 37577010 37577315 -162052835 + AluSx SINE Alu 1 310 -2 1852 164 11 0 chr5 37577605 37577892 -162052258 + AluSx SINE Alu 1 290 -22 247 278 63 48 chr5 37578059 37578185 -162051965 + MIR SINE MIR 100 227 -35 1992 206 25 21 chr5 37579074 37579551 -162050599 + Charlie4a DNA MER1_type 27 505 -3 1620 182 0 21 chr5 37579738 37580024 -162050126 + AluSq SINE Alu 16 295 -18 514 259 24 29 chr5 37580525 37580695 -162049455 + MER45A DNA AcHobo 10 178 0 1204 212 94 26 chr5 37580792 37581190 -162048960 + MLT2B1 LTR ERVL 2 457 -63 2162 112 3 3 chr5 37581202 37581497 -162048653 - AluSx SINE Alu -11 301 7 1573 231 138 18 chr5 37581676 37582127 -162048023 - MLT1D LTR MaLR 0 505 1 227 273 36 0 chr5 37582319 37582374 -162047776 + G-rich Low_complexity Low_complexity 6 62 0 1512 188 0 31 chr5 37583094 37583381 -162046769 - AluJb SINE Alu -20 292 15 2324 101 3 0 chr5 37583405 37583701 -162046449 - AluSx SINE Alu -15 297 1 484 274 132 38 chr5 37584157 37584497 -162045653 + L2 LINE L2 2468 2839 -475 360 264 20 74 chr5 37584566 37584714 -162045436 - MIR SINE MIR -23 239 100 336 238 42 35 chr5 37584901 37585044 -162045106 + L1ME4a LINE L1 5960 6103 -18 576 284 108 22 chr5 37585044 37585312 -162044838 + L2 LINE L2 3023 3313 0 874 167 0 14 chr5 37586057 37586201 -162043949 + AluJb SINE Alu 150 291 -21 419 287 56 7 chr5 37586767 37586910 -162043240 + MIR SINE MIR 3 152 -110 622 315 121 30 chr5 37586915 37587171 -162042979 + LTR33 LTR ERVL 89 395 -126 2072 152 118 0 chr5 37587171 37587552 -162042598 - MSTC LTR MaLR -2 426 1 622 315 121 30 chr5 37587552 37587692 -162042458 + LTR33 LTR ERVL 395 521 0 744 208 45 0 chr5 37587886 37588040 -162042110 + LTR33A LTR ERVL 363 523 0 243 276 0 13 chr5 37588041 37588117 -162042033 + MIR SINE MIR 110 184 -78 2258 106 0 23 chr5 37588248 37588549 -162041601 + AluSx SINE Alu 5 298 -14 865 199 4 3 chr5 37589805 37590041 -162040109 + AluJb SINE Alu 1 305 -7 1411 165 95 22 chr5 37591456 37591617 -162038533 - AluJo SINE Alu -13 299 108 243 0 0 0 chr5 37591617 37591644 -162038506 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1411 165 95 22 chr5 37591644 37591755 -162038395 - AluJo SINE Alu -204 108 7 469 268 155 10 chr5 37592079 37592273 -162037877 + MIR SINE MIR 28 249 -13 289 178 69 59 chr5 37592785 37592886 -162037264 - MIR SINE MIR -21 241 140 1110 316 131 9 chr5 37592890 37593342 -162036808 + LTR33 LTR ERVL 15 521 0 316 205 197 60 chr5 37593342 37593459 -162036691 - MIR SINE MIR -109 153 21 1797 162 3 29 chr5 37593817 37594126 -162036024 - AluJo SINE Alu -7 305 5 233 333 15 0 chr5 37594612 37594678 -162035472 + MIR SINE MIR 8 74 -188 1071 284 62 5 chr5 37594679 37595066 -162035084 - LTR16C LTR ERVL -2 489 81 636 315 60 4 chr5 37595722 37595973 -162034177 - ERVL LTR ERVL -858 4906 4642 1554 216 14 3 chr5 37596386 37596682 -162033468 + AluJo SINE Alu 1 299 -13 237 365 58 0 chr5 37596696 37596800 -162033350 + MIR SINE MIR 34 143 -65 2791 156 61 20 chr5 37596984 37597297 -162032853 - MLT2B2 LTR ERVL 0 515 173 2293 151 92 0 chr5 37597297 37597689 -162032461 + MSTC LTR MaLR 1 428 0 2791 156 61 20 chr5 37597689 37597870 -162032280 - MLT2B2 LTR ERVL -342 173 1 256 310 123 39 chr5 37598558 37598713 -162031437 + MIR3 SINE MIR 28 195 -13 604 294 83 24 chr5 37598741 37599030 -162031120 + L2 LINE L2 3005 3310 -3 2300 84 7 0 chr5 37599066 37599350 -162030800 + AluSg SINE Alu 1 286 -24 2190 136 0 3 chr5 37599602 37599911 -162030239 + AluSx SINE Alu 1 308 -4 504 279 0 0 chr5 37600039 37600175 -162029975 + MIR SINE MIR 18 153 -109 843 284 111 31 chr5 37600206 37600629 -162029521 + LTR33 LTR ERVL 47 503 -18 272 279 0 0 chr5 37600666 37600745 -162029405 + MIR SINE MIR 183 261 -1 562 246 8 15 chr5 37601073 37601203 -162028947 + MER45A DNA AcHobo 47 175 -3 264 30 0 0 chr5 37602194 37602227 -162027923 + (CA)n Simple_repeat Simple_repeat 1 33 0 23 0 0 0 chr5 37603074 37603097 -162027053 + AT_rich Low_complexity Low_complexity 1 23 0 2298 99 0 0 chr5 37603570 37603852 -162026298 - AluSc SINE Alu -27 282 1 2002 135 3 13 chr5 37604226 37604530 -162025620 + AluSx SINE Alu 1 301 -11 829 204 0 0 chr5 37604814 37604961 -162025189 + FAM SINE Alu 12 158 -27 1538 98 22 40 chr5 37604963 37605187 -162024963 + MER30 DNA MER1_type 11 230 0 898 153 0 0 chr5 37605214 37605345 -162024805 + FLAM_C SINE Alu 6 136 -7 1971 150 3 19 chr5 37606036 37606350 -162023800 + AluSq SINE Alu 1 309 -4 22 56 0 0 chr5 37606478 37606514 -162023636 + AT_rich Low_complexity Low_complexity 1 36 0 1131 241 74 83 chr5 37607116 37607207 -162022943 - MLT1L LTR MaLR -31 584 494 1869 183 29 18 chr5 37607207 37607590 -162022560 - MLT1B LTR MaLR -3 387 1 1131 241 74 83 chr5 37607590 37608051 -162022099 - MLT1L LTR MaLR -121 494 37 2153 130 17 0 chr5 37608730 37609031 -162021119 - AluJb SINE Alu -6 306 1 191 214 143 14 chr5 37609469 37609539 -162020611 + L3 LINE CR1 1148 1226 -351 688 80 0 0 chr5 37609793 37609881 -162020269 + AluSg/x SINE Alu 213 300 -10 2611 64 0 3 chr5 37609917 37610229 -162019921 - AluY SINE Alu 0 311 1 180 344 0 0 chr5 37610342 37610403 -162019747 - L3 LINE CR1 -34 1543 1483 2028 161 18 21 chr5 37610454 37610790 -162019360 - MER2 DNA MER2_type -10 335 1 419 368 35 56 chr5 37610818 37611193 -162018957 - L2 LINE L2 0 3272 2906 1641 186 13 10 chr5 37611203 37611504 -162018646 - AluJb SINE Alu -7 305 4 1893 149 30 10 chr5 37612816 37613118 -162017032 + AluJb SINE Alu 1 308 -4 2223 148 77 17 chr5 37613291 37613695 -162016455 + MSTA LTR MaLR 1 428 0 351 60 0 0 chr5 37615120 37615170 -162014980 + (A)n Simple_repeat Simple_repeat 1 50 0 496 311 91 20 chr5 37615529 37615870 -162014280 + L1ME4a LINE L1 5524 5888 -233 4040 107 140 56 chr5 37615934 37616216 -162013934 + Tigger3(Golem) DNA MER2_type 2 259 -2770 2520 63 0 3 chr5 37616216 37616519 -162013631 - AluY SINE Alu -9 302 1 4040 107 140 56 chr5 37616519 37616558 -162013592 + Tigger3(Golem) DNA MER2_type 259 293 -2736 2148 124 7 0 chr5 37616558 37616856 -162013294 - AluSq SINE Alu -13 300 1 4040 107 140 56 chr5 37616856 37617225 -162012925 + Tigger3(Golem) DNA MER2_type 293 630 -2399 2192 118 10 0 chr5 37617225 37617531 -162012619 - AluSx SINE Alu -3 309 1 4040 107 140 56 chr5 37617531 37617625 -162012525 + Tigger3(Golem) DNA MER2_type 630 715 -2314 281 89 22 0 chr5 37617625 37617670 -162012480 + (CTCA)n Simple_repeat Simple_repeat 1 46 0 4040 107 140 56 chr5 37617670 37617753 -162012397 + Tigger3(Golem) DNA MER2_type 715 790 -2239 1800 184 0 13 chr5 37617753 37618069 -162012081 - AluJo SINE Alu 0 312 1 4040 107 140 56 chr5 37618069 37618341 -162011809 + Tigger3(Golem) DNA MER2_type 790 3028 -1 298 273 0 0 chr5 37618372 37618438 -162011712 + L1ME4a LINE L1 5987 6052 -69 789 214 23 6 chr5 37618903 37619076 -162011074 - MER45A DNA AcHobo -2 176 1 261 139 0 0 chr5 37619292 37619335 -162010815 + (GGGA)n Simple_repeat Simple_repeat 3 45 0 261 0 0 0 chr5 37619552 37619581 -162010569 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1245 158 206 0 chr5 37619584 37619812 -162010338 - AluJo SINE Alu -35 277 3 464 110 12 0 chr5 37619851 37619933 -162010217 + L1MA4A LINE L1 6220 6302 -1 272 336 82 0 chr5 37620096 37620206 -162009944 + MIR SINE MIR 82 200 -62 2079 127 10 0 chr5 37620892 37621183 -162008967 + AluSx SINE Alu 1 294 -18 562 81 0 0 chr5 37621191 37621265 -162008885 + Alu SINE Alu 2 75 -236 270 0 0 0 chr5 37621516 37621546 -162008604 + (TG)n Simple_repeat Simple_repeat 2 31 0 421 281 97 71 chr5 37622215 37622303 -162007847 - L2 LINE L2 -1 3312 3228 2024 125 28 0 chr5 37622303 37622592 -162007558 + AluSx SINE Alu 3 299 -13 2205 107 7 0 chr5 37622594 37622884 -162007266 + AluSg SINE Alu 1 292 -18 421 281 97 71 chr5 37622884 37623483 -162006667 - L2 LINE L2 -85 3228 2601 829 169 0 0 chr5 37624108 37624238 -162005912 - FLAM_C SINE Alu -3 130 1 2102 137 0 0 chr5 37624242 37624565 -162005585 - AluSx SINE Alu 0 323 1 352 338 33 26 chr5 37624631 37624782 -162005368 + MIR SINE MIR 1 152 -110 845 163 7 13 chr5 37626386 37626539 -162003611 + MLT1A2 LTR MaLR 1 152 -213 1745 146 14 41 chr5 37626543 37626678 -162003472 + AluJb SINE Alu 1 138 -174 2338 107 0 0 chr5 37626678 37626977 -162003173 + AluSc SINE Alu 1 299 -10 1745 146 14 41 chr5 37626977 37627136 -162003014 + AluJb SINE Alu 138 287 -25 36 19 0 19 chr5 37627159 37627197 -162002953 + AT_rich Low_complexity Low_complexity 1 39 -14 2394 91 3 0 chr5 37627197 37627505 -162002645 - AluSc SINE Alu 0 309 1 36 19 0 19 chr5 37627505 37627520 -162002630 + AT_rich Low_complexity Low_complexity 39 53 0 962 228 5 24 chr5 37627520 37627731 -162002419 + MLT1A2 LTR MaLR 157 363 -11 259 235 0 29 chr5 37627926 37627994 -162002156 - L2 LINE L2 -2 3270 3205 2183 232 114 21 chr5 37628203 37628862 -162001288 + HsTC2c DNA Tc2 1 720 -9 667 224 94 50 chr5 37628922 37629123 -162001027 - MER63A DNA MER1_type 0 210 1 4144 126 14 22 chr5 37629353 37630021 -162000129 + Tigger3b DNA MER2_type 1 662 -569 340 39 77 0 chr5 37630061 37630113 -162000037 + Tigger3b DNA MER2_type 650 705 -527 2143 102 6 35 chr5 37630132 37630447 -161999703 - AluSx SINE Alu -6 306 1 183 320 67 62 chr5 37630476 37630654 -161999496 - L2 LINE L2 -371 2943 2765 319 220 0 90 chr5 37630831 37630931 -161999219 + MIR SINE MIR 92 182 -80 267 256 13 0 chr5 37630999 37631077 -161999073 + MIR3 SINE MIR 129 207 -1 560 293 5 25 chr5 37631659 37631857 -161998293 - MIR SINE MIR -20 242 49 22 35 0 0 chr5 37632776 37632805 -161997345 + AT_rich Low_complexity Low_complexity 1 29 0 1456 206 33 7 chr5 37632805 37633081 -161997069 - AluJo SINE Alu -23 289 7 304 248 183 0 chr5 37633584 37633721 -161996429 + L2 LINE L2 3011 3172 -141 1692 175 32 66 chr5 37633768 37633816 -161996334 + MLT1A1 LTR MaLR 1 49 -316 2257 130 31 0 chr5 37633816 37634169 -161995981 + THE1B LTR MaLR 1 364 0 1692 175 32 66 chr5 37634169 37634498 -161995652 + MLT1A1 LTR MaLR 49 365 0 240 281 22 0 chr5 37634501 37634590 -161995560 + L2 LINE L2 3182 3272 0 788 219 24 6 chr5 37634719 37634888 -161995262 + MER58B DNA MER1_type 167 338 -3 2227 129 0 0 chr5 37635036 37635338 -161994812 - AluSx SINE Alu -9 303 2 26 50 0 0 chr5 37635345 37635385 -161994765 + AT_rich Low_complexity Low_complexity 1 40 0 962 278 53 32 chr5 37635419 37635757 -161994393 - MLT1I LTR MaLR -2 407 63 2027 167 10 52 chr5 37636744 37637151 -161992999 - MLT1B LTR MaLR 0 390 1 1791 157 33 0 chr5 37637183 37637485 -161992665 + AluJb SINE Alu 1 311 0 288 0 0 0 chr5 37637590 37637622 -161992528 + (TG)n Simple_repeat Simple_repeat 1 32 0 2377 103 3 0 chr5 37637655 37637967 -161992183 + AluSp SINE Alu 1 313 0 423 285 20 31 chr5 37638230 37638573 -161991577 - L1MEd LINE L1 -4738 1572 1199 2885 49 11 0 chr5 37638573 37638922 -161991228 - L1PA7 LINE L1 -8 6146 5794 423 285 20 31 chr5 37638922 37639122 -161991028 - L1MEd LINE L1 -5111 1199 998 1162 210 102 42 chr5 37639122 37639455 -161990695 - MSTD LTR MaLR 0 396 44 239 162 0 149 chr5 37639495 37639643 -161990507 - AluSp/q SINE Alu -13 290 165 882 267 43 89 chr5 37639782 37640154 -161989996 - L1MEd LINE L1 -5187 932 597 1706 154 0 39 chr5 37640154 37640439 -161989711 - AluJb SINE Alu -21 291 18 882 267 43 89 chr5 37640439 37640673 -161989477 - L1MEd LINE L1 -5522 597 354 266 351 14 7 chr5 37640788 37640936 -161989214 - L1MEd LINE L1 -5966 153 5 2016 155 62 6 chr5 37641102 37641265 -161988885 - THE1C LTR MaLR 0 375 223 231 36 0 0 chr5 37641265 37641293 -161988857 + (GA)n Simple_repeat Simple_repeat 1 28 0 2016 155 62 6 chr5 37641293 37641484 -161988666 - THE1C LTR MaLR -152 223 1 1687 142 0 31 chr5 37641533 37641822 -161988328 + AluSq SINE Alu 6 285 -28 324 0 0 0 chr5 37641822 37641858 -161988292 + (CA)n Simple_repeat Simple_repeat 2 37 0 480 245 192 37 chr5 37643266 37643621 -161986529 + MLT1G1 LTR MaLR 24 472 -123 191 129 0 0 chr5 37643840 37643871 -161986279 + MER5B DNA MER1_type 3 33 -145 39263 83 8 8 chr5 37643966 37650113 -161980037 - L1PA6 LINE L1 0 6154 11 2204 119 0 0 chr5 37650209 37650503 -161979647 + AluSx SINE Alu 1 294 -18 788 246 20 10 chr5 37650854 37651053 -161979097 - MIR SINE MIR -13 249 49 768 185 83 74 chr5 37651140 37651356 -161978794 + AluJo SINE Alu 1 218 -94 246 174 0 0 chr5 37651359 37651405 -161978745 + AluJb SINE Alu 87 132 -1 23 68 0 0 chr5 37651420 37651464 -161978686 + AT_rich Low_complexity Low_complexity 1 44 0 2246 109 7 0 chr5 37652615 37652909 -161977241 + AluSx SINE Alu 1 296 -16 1836 183 20 0 chr5 37653010 37653316 -161976834 + AluJb SINE Alu 1 312 0 992 141 58 0 chr5 37653458 37653614 -161976536 + AluJb SINE Alu 136 300 -12 2186 123 0 16 chr5 37653614 37653922 -161976228 + AluSg SINE Alu 1 303 -7 435 222 40 24 chr5 37654329 37654455 -161975695 + MER5B DNA MER1_type 51 178 0 370 290 90 0 chr5 37654907 37655052 -161975098 + MIR SINE MIR 30 187 -75 810 265 39 35 chr5 37655104 37655293 -161974857 + MIR SINE MIR 3 195 -67 431 264 0 69 chr5 37655293 37655437 -161974713 - MER94 DNA DNA 0 134 1 810 265 39 35 chr5 37655437 37655504 -161974646 + MIR SINE MIR 195 260 -2 1155 194 94 10 chr5 37655520 37655819 -161974331 - MER33 DNA MER1_type 0 324 1 1556 125 7 88 chr5 37656807 37657102 -161973048 + AluJb SINE Alu 4 274 -38 437 125 0 25 chr5 37657131 37657211 -161972939 + (GGAA)n Simple_repeat Simple_repeat 4 81 0 254 284 71 41 chr5 37657224 37657393 -161972757 - MIR3 SINE MIR -32 176 2 25 0 0 0 chr5 37659541 37659566 -161970584 + GC_rich Low_complexity Low_complexity 1 25 0 25 51 0 0 chr5 37660068 37660107 -161970043 + GC_rich Low_complexity Low_complexity 1 39 0 212 191 0 24 chr5 37661743 37661785 -161968365 + CT-rich Low_complexity Low_complexity 3 43 0 2218 84 3 25 chr5 37661810 37662120 -161968030 + AluSc SINE Alu 1 304 0 1609 183 47 0 chr5 37662574 37662853 -161967297 - AluJb SINE Alu -20 292 1 198 103 0 0 chr5 37662893 37662922 -161967228 + (TTTTTA)n Simple_repeat Simple_repeat 4 32 0 1891 136 8 0 chr5 37663211 37663475 -161966675 + AluJb SINE Alu 18 283 -29 2154 82 4 14 chr5 37663477 37663758 -161966392 + AluSp SINE Alu 29 306 -7 280 307 47 8 chr5 37663833 37663960 -161966190 + MIR3 SINE MIR 66 197 -11 227 132 38 57 chr5 37664104 37664157 -161965993 - U13 snRNA snRNA -52 52 1 667 262 226 21 chr5 37664157 37664350 -161965800 + L2 LINE L2 2909 3061 -252 1071 179 57 35 chr5 37664350 37664579 -161965571 - MER46A DNA MER2_type -1 235 2 667 262 226 21 chr5 37664579 37664721 -161965429 + L2 LINE L2 3061 3313 0 1241 190 0 14 chr5 37665166 37665387 -161964763 - AluJo SINE Alu -94 218 1 2255 111 0 22 chr5 37666020 37666336 -161963814 - AluSx SINE Alu -1 311 3 1843 175 3 7 chr5 37666536 37666845 -161963305 + AluJb SINE Alu 1 308 -4 692 161 22 36 chr5 37667528 37667665 -161962485 + AluJb SINE Alu 2 136 -176 583 101 22 0 chr5 37667673 37667762 -161962388 + AluY SINE Alu 219 309 -2 21 0 0 0 chr5 37667926 37667947 -161962203 + AT_rich Low_complexity Low_complexity 1 21 0 2791 98 7 65 chr5 37667947 37668304 -161961846 - L1PB1 LINE L1 -1 6150 5824 1011 161 0 0 chr5 37668304 37668484 -161961666 + (TA)n Simple_repeat Simple_repeat 1 180 0 2791 98 7 65 chr5 37668484 37668585 -161961565 - L1PB1 LINE L1 -327 5824 5719 204 40 0 0 chr5 37668800 37668825 -161961325 + (T)n Simple_repeat Simple_repeat 1 25 0 216 313 102 8 chr5 37670326 37670454 -161959696 - MIR SINE MIR -122 140 1 1830 166 7 3 chr5 37670556 37670852 -161959298 - AluJb SINE Alu -15 297 1 24 0 0 0 chr5 37670858 37670882 -161959268 + AT_rich Low_complexity Low_complexity 1 24 0 2188 107 0 3 chr5 37671434 37671723 -161958427 + AluSx SINE Alu 11 298 -14 2307 105 0 0 chr5 37672174 37672469 -161957681 - AluSc SINE Alu -14 295 1 325 316 63 19 chr5 37673599 37673757 -161956393 + MIR SINE MIR 28 192 -70 34 0 0 0 chr5 37673766 37673800 -161956350 + AT_rich Low_complexity Low_complexity 1 34 0 1015 156 113 59 chr5 37674876 37675186 -161954964 - MER33 DNA MER1_type -5 319 1 319 169 46 0 chr5 37676846 37676911 -161953239 + MLT1K LTR MaLR 520 587 -1 2144 125 0 13 chr5 37677896 37678201 -161951949 - AluSx SINE Alu -9 303 3 2254 100 0 7 chr5 37678212 37678511 -161951639 - AluSc SINE Alu -12 297 1 2286 227 61 30 chr5 37678519 37678785 -161951365 - L1MB7 LINE L1 0 6184 5928 2089 126 7 7 chr5 37678785 37679087 -161951063 + AluJo SINE Alu 1 302 -10 2286 227 61 30 chr5 37679087 37679462 -161950688 - L1MB7 LINE L1 -256 5928 5523 1931 139 41 0 chr5 37680470 37680765 -161949385 - AluSg SINE Alu -3 307 1 1868 132 38 11 chr5 37680766 37681053 -161949097 - AluJo SINE Alu -17 295 1 447 70 70 0 chr5 37681148 37681219 -161948931 + MADE1 DNA Mariner 5 80 0 999 154 0 0 chr5 37681405 37681578 -161948572 - AluSg/x SINE Alu 0 306 134 2030 156 93 3 chr5 37681675 37682028 -161948122 + MLT1B LTR MaLR 1 385 -5 197 33 33 0 chr5 37682633 37682663 -161947487 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 1556 232 79 3 chr5 37683534 37683901 -161946249 - MSTD LTR MaLR 0 396 2 188 307 57 11 chr5 37683994 37684082 -161946068 + L2 LINE L2 2962 3053 -219 1310 153 14 32 chr5 37684820 37685036 -161945114 - AluJo SINE Alu -22 290 79 418 254 133 32 chr5 37685552 37685819 -161944331 + MLT1G1 LTR MaLR 24 344 -230 6565 70 15 0 chr5 37686309 37687164 -161942986 - L1PA6 LINE L1 0 6154 5287 7834 122 6 3 chr5 37687284 37688421 -161941729 - HERVK9 LTR ERVK -282 5634 4494 237 322 11 0 chr5 37688616 37688703 -161941447 + L3 LINE CR1 928 1015 -562 2500 90 3 0 chr5 37689157 37689469 -161940681 - AluSp SINE Alu 0 313 1 1668 199 0 3 chr5 37689469 37689776 -161940374 - AluSx SINE Alu -6 306 1 659 241 35 35 chr5 37690033 37690315 -161939835 + MER33 DNA MER1_type 1 282 -42 777 199 32 48 chr5 37690791 37690977 -161939173 - AluJo SINE Alu -126 186 4 2370 100 3 0 chr5 37691025 37691336 -161938814 - AluSp SINE Alu -1 312 1 843 154 6 13 chr5 37691403 37691559 -161938591 - L1MB8 LINE L1 -6 6172 6018 2092 49 0 39 chr5 37692914 37693220 -161936930 - AluY SINE Alu -17 294 1 337 287 178 0 chr5 37693440 37693597 -161936553 - MER5A DNA MER1_type -4 185 1 733 173 0 8 chr5 37694298 37694431 -161935719 + FLAM_C SINE Alu 2 133 0 1470 124 151 4 chr5 37694510 37694775 -161935375 + L1PB2 LINE L1 5848 6151 0 315 309 24 8 chr5 37694813 37694936 -161935214 + MIR3 SINE MIR 38 162 -46 1876 118 39 69 chr5 37695452 37695841 -161934309 + L1MA8 LINE L1 5913 6289 -2 25 0 0 0 chr5 37696353 37696378 -161933772 + AT_rich Low_complexity Low_complexity 1 25 0 559 321 25 13 chr5 37698028 37698265 -161931885 - MIR SINE MIR 0 262 23 1877 153 0 7 chr5 37698321 37698616 -161931534 + AluJb SINE Alu 6 298 -14 341 309 51 39 chr5 37698661 37698786 -161931364 + MIR SINE MIR 77 206 -56 2116 111 3 3 chr5 37698786 37699106 -161931044 + AluSp SINE Alu 1 313 0 341 309 51 39 chr5 37699106 37699158 -161930992 + MIR SINE MIR 206 256 -6 2322 103 0 7 chr5 37701180 37701481 -161928669 + AluSx SINE Alu 5 303 -9 862 82 0 0 chr5 37701642 37701752 -161928398 + AluY SINE Alu 195 304 -7 21 57 0 0 chr5 37701807 37701842 -161928308 + AT_rich Low_complexity Low_complexity 1 35 0 2458 151 42 24 chr5 37701987 37702445 -161927705 - MLT1C LTR MaLR -1 466 1 548 305 5 11 chr5 37702678 37702865 -161927285 - MIR SINE MIR -12 250 65 2004 135 0 4 chr5 37704114 37704395 -161925755 - AluSx SINE Alu -32 280 1 302 291 71 44 chr5 37704463 37704645 -161925505 - MLT1J LTR MaLR 0 511 325 1357 155 39 11 chr5 37704650 37704934 -161925216 + MER33 DNA MER1_type 1 292 -32 1724 174 0 44 chr5 37704994 37705311 -161924839 - AluJo SINE Alu -5 307 5 2409 81 7 0 chr5 37705324 37705631 -161924519 - AluY SINE Alu -2 309 1 233 258 108 0 chr5 37705660 37705753 -161924397 - MLT1J LTR MaLR -316 195 93 2280 121 0 0 chr5 37706044 37706350 -161923800 + AluSx SINE Alu 1 306 -6 2531 87 3 0 chr5 37706350 37706662 -161923488 + AluSp SINE Alu 1 313 0 237 322 11 0 chr5 37707115 37707202 -161922948 - L3 LINE CR1 -562 1015 928 439 191 0 17 chr5 37707313 37707428 -161922722 + C-rich Low_complexity Low_complexity 3 115 0 203 329 0 14 chr5 37707428 37707498 -161922652 + MIR SINE MIR 118 186 -76 212 269 45 0 chr5 37707553 37707620 -161922530 + L2 LINE L2 3203 3272 0 239 296 93 19 chr5 37708371 37708479 -161921671 - MIR SINE MIR -34 228 113 1898 172 61 4 chr5 37708487 37708884 -161921266 - MLT1C LTR MaLR 0 467 2 4562 129 63 14 chr5 37710251 37711009 -161919141 + MER4E LTR ERV1 1 768 -11 2128 117 0 7 chr5 37711012 37711311 -161918839 - AluSq SINE Alu -16 297 1 1184 158 20 5 chr5 37711481 37711677 -161918473 + AluSg/x SINE Alu 83 281 -29 2263 105 7 0 chr5 37711909 37712203 -161917947 - AluSp SINE Alu -17 296 1 305 258 139 41 chr5 37712215 37712459 -161917691 + L1ME4a LINE L1 5688 5955 -166 393 174 174 110 chr5 37712767 37712961 -161917189 - MER69 DNA AcHobo 0 2526 1 810 177 16 43 chr5 37713138 37713324 -161916826 + MER5A DNA MER1_type 1 181 -8 264 269 10 19 chr5 37713702 37713806 -161916344 + MIR SINE MIR 104 206 -56 609 206 7 39 chr5 37714038 37714158 -161915992 + MER3 DNA MER1_type 19 134 -28 746 167 8 8 chr5 37714158 37714290 -161915860 - FLAM_A SINE Alu -1 132 1 609 206 7 39 chr5 37714290 37714324 -161915826 + MER3 DNA MER1_type 134 168 -41 1495 186 71 8 chr5 37714328 37714694 -161915456 + MER3 DNA MER1_type 2235 2623 0 2414 101 3 0 chr5 37714836 37715144 -161915006 - AluSp SINE Alu -4 309 1 250 280 106 8 chr5 37716292 37716382 -161913768 + MIR3 SINE MIR 56 164 -44 2268 90 3 3 chr5 37716382 37716672 -161913478 + AluSx SINE Alu 1 290 -22 250 280 106 8 chr5 37716672 37716713 -161913437 + MIR3 SINE MIR 164 200 -8 2447 70 3 0 chr5 37717398 37717698 -161912452 - AluSp SINE Alu -12 301 1 1575 189 50 0 chr5 37718068 37718348 -161911802 + AluJo SINE Alu 11 304 -8 2046 108 4 7 chr5 37718382 37718661 -161911489 + AluSx SINE Alu 21 298 -14 294 287 40 46 chr5 37718812 37718986 -161911164 - MER5B DNA MER1_type -5 173 1 941 186 91 57 chr5 37719294 37719590 -161910560 - MLT1C LTR MaLR 0 467 162 371 264 32 16 chr5 37719775 37719900 -161910250 - MER5A DNA MER1_type -1 188 62 304 267 93 47 chr5 37720047 37720212 -161909938 + MLT1J LTR MaLR 7 179 -332 2086 146 22 32 chr5 37720212 37720324 -161909826 + MLT1A1 LTR MaLR 1 113 -252 1373 134 102 130 chr5 37720324 37720785 -161909365 - LTR7 LTR ERV1 -2 448 1 2086 146 22 32 chr5 37720785 37721041 -161909109 + MLT1A1 LTR MaLR 113 365 0 365 330 74 26 chr5 37721116 37721386 -161908764 + MLT1J LTR MaLR 229 511 0 427 206 152 0 chr5 37721936 37722028 -161908122 + MER103 DNA DNA 12 117 -49 25 0 0 0 chr5 37722065 37722090 -161908060 + AT_rich Low_complexity Low_complexity 1 25 0 230 162 0 0 chr5 37722326 37722363 -161907787 - L1PB3 LINE L1 -107 6047 6011 285 139 0 0 chr5 37722595 37722638 -161907512 - FRAM/FAM SINE Alu -94 72 30 624 234 0 8 chr5 37722773 37722897 -161907253 - FLAM_C SINE Alu -20 123 1 2374 86 7 0 chr5 37722997 37723298 -161906852 - AluSg SINE Alu -7 303 1 2911 153 24 16 chr5 37724140 37724648 -161905502 - MER41E LTR ERV1 0 512 1 256 247 171 73 chr5 37724771 37725046 -161905104 + L2 LINE L2 3012 3313 0 2185 126 0 7 chr5 37725609 37725910 -161904240 - AluSq SINE Alu -14 299 1 195 162 0 0 chr5 37726265 37726302 -161903848 + (TG)n Simple_repeat Simple_repeat 2 38 0 481 250 29 36 chr5 37727847 37728019 -161902131 + MIR SINE MIR 21 188 -62 1328 273 128 11 chr5 37728192 37728724 -161901426 - MLT1G1 LTR MaLR 0 595 2 27 0 0 0 chr5 37729188 37729215 -161900935 + AT_rich Low_complexity Low_complexity 1 27 0 2732 42 0 0 chr5 37729599 37729906 -161900244 - AluY SINE Alu -3 308 2 676 164 16 8 chr5 37730046 37730174 -161899976 - FLAM_A SINE Alu 0 142 14 203 272 22 33 chr5 37730270 37730362 -161899788 + CT-rich Low_complexity Low_complexity 6 96 0 321 242 0 33 chr5 37730467 37730558 -161899592 + L1MC4 LINE L1 6615 6702 -1340 234 228 18 0 chr5 37730560 37730617 -161899533 + (TA)n Simple_repeat Simple_repeat 2 59 0 2039 123 7 10 chr5 37730916 37731209 -161898941 - AluSx SINE Alu -20 292 1 1270 156 72 99 chr5 37731325 37731684 -161898466 + MLT1B LTR MaLR 1 465 -2 1852 115 0 0 chr5 37731764 37732008 -161898142 + AluSx SINE Alu 2 245 -67 1871 102 3 98 chr5 37732013 37732318 -161897832 + AluSq SINE Alu 27 302 -11 282 141 0 0 chr5 37732364 37732418 -161897732 - MLT2B1 LTR ERVL -1 512 354 1845 191 52 10 chr5 37732451 37732822 -161897328 - MLT2D LTR ERVL -41 479 1 2263 107 3 3 chr5 37733215 37733515 -161896635 - AluSx SINE Alu -12 300 1 2175 115 14 0 chr5 37734883 37735178 -161894972 + AluSq SINE Alu 1 299 -14 685 142 0 35 chr5 37735294 37735407 -161894743 + AluJo SINE Alu 2 110 -202 2028 143 143 11 chr5 37735410 37735788 -161894362 - MSTA LTR MaLR 0 428 1 2255 124 22 9 chr5 37735804 37736126 -161894024 + THE1B LTR MaLR 39 364 0 10145 100 87 4 chr5 37736126 37737584 -161892566 + THE1B-int LTR MaLR 1 1579 -1 2419 109 28 11 chr5 37737585 37737943 -161892207 + THE1B LTR MaLR 1 364 0 881 131 80 62 chr5 37737943 37738119 -161892031 + AluJo SINE Alu 108 286 -26 334 264 18 27 chr5 37738134 37738244 -161891906 + L1MC5 LINE L1 7711 7819 -142 1599 159 64 0 chr5 37738283 37738547 -161891603 + AluJb SINE Alu 1 281 -31 27 62 0 0 chr5 37738615 37738663 -161891487 + AT_rich Low_complexity Low_complexity 1 48 0 1562 241 52 47 chr5 37738703 37739322 -161890828 + L1MC5 LINE L1 7239 7860 -101 1901 160 3 13 chr5 37739590 37739897 -161890253 + AluSx SINE Alu 1 304 -8 2322 112 0 3 chr5 37739900 37740214 -161889936 + AluSq SINE Alu 1 313 0 2087 111 11 0 chr5 37741639 37741918 -161888232 - AluSx SINE Alu -11 301 20 266 134 37 12 chr5 37741946 37742028 -161888122 + (TA)n Simple_repeat Simple_repeat 2 85 0 196 270 230 0 chr5 37742404 37742504 -161887646 + L2 LINE L2 3191 3313 0 2275 98 10 0 chr5 37743858 37744154 -161885996 - AluSg SINE Alu -7 303 5 255 235 35 12 chr5 37745161 37745246 -161884904 - MIR SINE MIR -3 259 173 2213 82 7 7 chr5 37745322 37745614 -161884536 + AluSx SINE Alu 1 292 -20 894 140 0 22 chr5 37745770 37745906 -161884244 - FLAM_C SINE Alu 0 133 1 2156 175 0 3 chr5 37746068 37746399 -161883751 + MER1B DNA MER1_type 1 330 -9 1884 145 20 20 chr5 37746685 37746988 -161883162 + AluJo SINE Alu 6 308 -4 807 148 7 22 chr5 37747346 37747481 -161882669 + FLAM_C SINE Alu 1 133 0 874 228 75 47 chr5 37748337 37748591 -161881559 - MIR SINE MIR 0 262 2 321 248 41 74 chr5 37748890 37748983 -161881167 - L2 LINE L2 0 3272 3182 2153 90 35 10 chr5 37748983 37749273 -161880877 + AluSx SINE Alu 1 297 -15 321 248 41 74 chr5 37749273 37749300 -161880850 - L2 LINE L2 -90 3182 3156 478 212 157 2 chr5 37750470 37750612 -161879538 - MIR SINE MIR -58 150 1 202 264 19 0 chr5 37751164 37751217 -161878933 + L2 LINE L2 3210 3263 -9 219 261 43 29 chr5 37751615 37751684 -161878466 + MER5B DNA MER1_type 92 161 -17 2099 106 3 3 chr5 37751852 37752167 -161877983 - AluSg SINE Alu 0 315 1 1701 223 75 27 chr5 37752340 37752779 -161877371 - MLT1C LTR MaLR -1 466 7 503 236 115 0 chr5 37753785 37753933 -161876217 + MIR SINE MIR 2 166 -96 1678 212 80 30 chr5 37753941 37754379 -161875771 - MLT1C LTR MaLR -2 465 6 2517 70 0 0 chr5 37755309 37755610 -161874540 - AluY SINE Alu -10 301 1 2077 80 0 15 chr5 37755610 37755872 -161874278 - AluSx SINE Alu -16 296 39 2877 73 0 0 chr5 37755979 37756334 -161873816 + THE1A LTR MaLR 1 355 0 443 206 95 0 chr5 37756407 37756533 -161873617 + MIR SINE MIR 85 222 -40 27 0 0 0 chr5 37756903 37756930 -161873220 + AT_rich Low_complexity Low_complexity 1 27 0 286 246 31 54 chr5 37757004 37757134 -161873016 - L2 LINE L2 -23 3249 3123 790 114 8 30 chr5 37757901 37758032 -161872118 + FLAM_C SINE Alu 16 143 0 209 269 224 30 chr5 37759282 37759483 -161870667 - MIR SINE MIR -3 259 20 231 267 27 27 chr5 37759582 37759657 -161870493 + Charlie4 DNA MER1_type 1883 1957 -4 2367 86 7 0 chr5 37760055 37760357 -161869793 - AluSp SINE Alu -9 304 1 2042 77 70 18 chr5 37760361 37760647 -161869503 - AluSq SINE Alu -10 303 3 578 319 21 7 chr5 37760680 37760959 -161869191 - L1ME3A LINE L1 -208 5962 5680 305 290 65 26 chr5 37761132 37761287 -161868863 - MER5A DNA MER1_type 0 189 29 253 345 42 0 chr5 37761333 37761475 -161868675 + L3b LINE CR1 1117 1264 -319 423 0 0 0 chr5 37761902 37761910 -161868240 + (TG)n Simple_repeat Simple_repeat 1 55 0 423 0 0 0 chr5 37761910 37761957 -161868193 + (TG)n Simple_repeat Simple_repeat 2 48 0 1088 151 0 0 chr5 37761978 37762137 -161868013 - AluSg/x SINE Alu -16 294 136 272 266 115 0 chr5 37762140 37762253 -161867897 + MER112 DNA MER1_type 39 164 -96 2237 98 3 19 chr5 37762702 37762840 -161867310 + AluSq SINE Alu 1 140 -173 2335 107 0 0 chr5 37762840 37763138 -161867012 + AluSc SINE Alu 1 298 -11 2237 98 3 19 chr5 37763138 37763306 -161866844 + AluSq SINE Alu 140 302 -11 641 160 76 8 chr5 37763613 37763732 -161866418 - FLAM_C SINE Alu -4 129 3 465 120 53 0 chr5 37764651 37764726 -161865424 - MER3 DNA MER1_type -73 136 58 * 886 184 34 63 chr5 37764717 37764924 -161865226 - MER20 DNA MER1_type -18 201 1 311 219 37 12 chr5 37764924 37764990 -161865160 - MER3 DNA MER1_type -130 79 12 265 214 41 92 chr5 37765080 37765178 -161864972 - MIR SINE MIR -131 131 39 398 195 228 34 chr5 37767351 37767500 -161862650 + MIR SINE MIR 21 198 -64 406 123 0 0 chr5 37767503 37767560 -161862590 - LTR16C LTR ERVL -5 486 430 715 181 9 0 chr5 37767799 37767915 -161862235 - FLAM_A SINE Alu -16 117 1 1002 219 17 0 chr5 37767916 37768094 -161862056 + MER58A DNA MER1_type 42 222 -2 368 259 0 0 chr5 37768105 37768186 -161861964 - LTR16C LTR ERVL -219 272 192 2161 130 0 3 chr5 37768187 37768486 -161861664 + AluSx SINE Alu 1 298 -14 3645 113 43 0 chr5 37768536 37769042 -161861108 + MER1A DNA MER1_type 2 529 0 467 129 47 12 chr5 37769211 37769296 -161860854 - AluSc SINE Alu -8 301 214 2032 78 0 0 chr5 37769296 37769538 -161860612 - AluSc SINE Alu -50 259 18 283 222 7 68 chr5 37769545 37769648 -161860502 - MER5B DNA MER1_type -45 133 45 1743 174 17 26 chr5 37769933 37770283 -161859867 - L1MB5 LINE L1 -8 6166 5820 1284 170 146 0 chr5 37770412 37770563 -161859587 - AluJb SINE Alu -19 283 155 228 35 0 0 chr5 37770563 37770592 -161859558 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1284 170 146 0 chr5 37770592 37770687 -161859463 - AluJb SINE Alu -147 155 1 684 200 8 8 chr5 37771003 37771133 -161859017 - FLAM_A SINE Alu 0 133 4 426 69 0 0 chr5 37772129 37772187 -161857963 + (TG)n Simple_repeat Simple_repeat 2 59 0 1994 111 36 4 chr5 37773071 37773350 -161856800 - AluSq SINE Alu -24 289 2 529 205 96 24 chr5 37773456 37773622 -161856528 - MER5B DNA MER1_type 0 178 1 234 0 0 0 chr5 37773742 37773768 -161856382 + (TC)n Simple_repeat Simple_repeat 1 26 0 2530 107 6 8 chr5 37774044 37774400 -161855750 + THE1A LTR MaLR 1 355 0 11615 97 8 9 chr5 37774400 37775983 -161854167 + THE1A-int LTR MaLR 1 1580 0 2394 118 8 8 chr5 37775983 37776338 -161853812 + THE1A LTR MaLR 1 355 0 358 295 9 9 chr5 37776479 37776591 -161853559 - LTR33A LTR ERVL -402 121 10 228 122 0 0 chr5 37776778 37776819 -161853331 + (CCA)n Simple_repeat Simple_repeat 2 42 0 1966 125 3 19 chr5 37777078 37777390 -161852760 + THE1-int LTR MaLR 929 1235 -345 556 125 0 0 chr5 37777388 37777468 -161852682 - THE1-int LTR MaLR -572 1008 929 * 182 298 0 0 chr5 37777766 37777823 -161852327 - L2 LINE L2 -61 3252 3196 2165 126 0 0 chr5 37777912 37778205 -161851945 + AluSx SINE Alu 3 295 -17 217 314 141 13 chr5 37778782 37778938 -161851212 - MIR3 SINE MIR -5 203 28 1922 138 7 10 chr5 37778943 37779232 -161850918 - AluSx SINE Alu -24 288 1 395 283 139 0 chr5 37779258 37779424 -161850726 - MER5A DNA MER1_type 0 189 1 482 295 108 0 chr5 37779782 37780007 -161850143 - L2 LINE L2 -292 3021 2774 31 76 0 0 chr5 37780007 37780073 -161850077 + AT_rich Low_complexity Low_complexity 1 66 0 301 266 18 28 chr5 37780339 37780448 -161849702 + MIR3 SINE MIR 86 193 -15 1928 141 0 38 chr5 37781101 37781414 -161848736 - AluJb SINE Alu -9 303 3 569 201 41 52 chr5 37781452 37781542 -161848608 + MIR SINE MIR 8 97 -165 552 114 13 0 chr5 37781542 37781621 -161848529 + MADE1 DNA Mariner 1 80 0 569 201 41 52 chr5 37781621 37781724 -161848426 + MIR SINE MIR 97 199 -63 2715 135 28 6 chr5 37782373 37783120 -161847030 + L1MA4A LINE L1 4900 5665 -638 6059 159 22 25 chr5 37783123 37783276 -161846874 + L1MA3 LINE L1 4126 4278 -1868 1868 137 3 56 chr5 37783276 37783598 -161846552 + AluSx SINE Alu 3 307 -5 6059 159 22 25 chr5 37783598 37784654 -161845496 + L1MA3 LINE L1 4278 5332 -814 755 154 8 0 chr5 37784662 37784779 -161845371 + FLAM_C SINE Alu 9 126 -17 6391 98 19 37 chr5 37784788 37785727 -161844423 + L1MA3 LINE L1 5321 6242 -63 1827 176 0 3 chr5 37785727 37786017 -161844133 + AluJb SINE Alu 1 289 -23 6391 98 19 37 chr5 37786017 37786080 -161844070 + L1MA3 LINE L1 6242 6305 0 1990 142 16 7 chr5 37786090 37786393 -161843757 + AluSx SINE Alu 1 306 -6 2988 130 50 73 chr5 37786393 37786701 -161843449 + L1MA4A LINE L1 5661 5974 -329 2331 111 3 0 chr5 37786701 37787007 -161843143 + AluSx SINE Alu 1 307 -5 2988 130 50 73 chr5 37787007 37787348 -161842802 + L1MA4A LINE L1 5974 6297 -6 348 215 113 44 chr5 37787415 37787567 -161842583 - MER5A DNA MER1_type -1 177 9 584 121 0 0 chr5 37787615 37787698 -161842452 + AluJ/FLAM SINE Alu 2 84 -228 553 133 163 0 chr5 37787840 37787938 -161842212 + FLAM_C SINE Alu 4 117 -16 14549 39 10 9 chr5 37788058 37790586 -161839564 + L1PA5 LINE L1 3623 6154 0 1066 177 16 0 chr5 37790784 37790976 -161839174 + L1M4 LINE L1 5484 5678 -500 3578 92 55 8 chr5 37790977 37791465 -161838685 - MER9 LTR ERVK 0 511 1 10900 107 8 6 chr5 37791474 37793330 -161836820 - HERVK9 LTR ERVK 0 8032 4155 6775 86 3 0 chr5 37793332 37794205 -161835945 - HERVK9 LTR ERVK -2012 3904 3029 * 9332 77 7 0 chr5 37794190 37795378 -161834772 - HERVK9 LTR ERVK -3297 2619 1424 4046 92 10 23 chr5 37795376 37795951 -161834199 - HERVK9 LTR ERVK -5348 568 1 * 3205 123 69 6 chr5 37795951 37796432 -161833718 - MER9 LTR ERVK 0 511 1 2508 189 44 19 chr5 37796433 37796974 -161833176 + L1MB7 LINE L1 5614 6168 -16 1879 159 9 19 chr5 37797118 37797433 -161832717 - AluJb SINE Alu 0 312 1 930 157 18 97 chr5 37797433 37797650 -161832500 - MER20 DNA MER1_type -19 200 1 313 267 155 9 chr5 37797660 37797776 -161832374 + L2 LINE L2 3181 3313 0 2233 115 3 0 chr5 37797902 37798197 -161831953 + AluSx SINE Alu 1 296 -16 203 203 419 0 chr5 37799034 37799108 -161831042 - MIR SINE MIR -118 144 40 219 187 13 27 chr5 37799929 37800004 -161830146 + (TA)n Simple_repeat Simple_repeat 1 74 0 1074 242 168 12 chr5 37800822 37801240 -161828910 - LTR33 LTR ERVL -2 519 37 182 283 50 0 chr5 37801352 37801412 -161828738 + L3b LINE CR1 1431 1493 -90 2447 65 7 3 chr5 37801437 37801747 -161828403 - AluY SINE Alu 0 311 1 475 186 67 129 chr5 37802651 37802844 -161827306 + L1ME3A LINE L1 5988 6168 -2 2262 114 0 16 chr5 37803354 37803661 -161826489 + AluSx SINE Alu 1 302 -10 483 313 26 36 chr5 37803804 37803999 -161826151 - MIR3 SINE MIR -6 202 10 201 288 0 45 chr5 37804012 37804078 -161826072 + MIR SINE MIR 32 94 -168 277 302 78 9 chr5 37804519 37804635 -161825515 + MIR SINE MIR 130 253 -9 307 333 77 19 chr5 37804888 37805044 -161825106 + MIR SINE MIR 23 187 -75 2039 136 3 10 chr5 37805327 37805628 -161824522 + AluSx SINE Alu 1 299 -13 315 49 0 0 chr5 37806034 37806075 -161824075 + (CA)n Simple_repeat Simple_repeat 2 42 0 365 294 17 8 chr5 37806075 37806194 -161823956 - MER5B DNA MER1_type -52 126 7 728 259 128 55 chr5 37806492 37806890 -161823260 - MARNA DNA Mariner -84 502 76 2299 92 0 10 chr5 37807247 37807553 -161822597 - AluSx SINE Alu -9 303 1 432 228 189 43 chr5 37807562 37807843 -161822307 - L1ME4a LINE L1 0 6121 5800 339 44 0 0 chr5 37808696 37808741 -161821409 + (CA)n Simple_repeat Simple_repeat 2 46 0 2441 50 10 3 chr5 37808886 37809186 -161820964 - AluY SINE Alu -9 302 1 2204 84 21 0 chr5 37810661 37810947 -161819203 + AluSx SINE Alu 1 292 -20 1463 169 31 4 chr5 37810988 37811242 -161818908 + AluJo SINE Alu 1 261 -51 981 174 113 15 chr5 37811279 37811474 -161818676 + MER20 DNA MER1_type 1 214 -5 807 11 0 0 chr5 37811478 37811568 -161818582 + 5S rRNA rRNA 1 90 -31 414 293 35 88 chr5 37811765 37812048 -161818102 - L2 LINE L2 -13 3300 3033 1871 147 0 31 chr5 37812467 37812788 -161817362 + AluJb SINE Alu 3 314 0 23 33 0 0 chr5 37812872 37812902 -161817248 + AT_rich Low_complexity Low_complexity 1 30 0 2364 99 0 3 chr5 37814756 37815068 -161815082 + AluSx SINE Alu 1 311 -1 605 290 114 65 chr5 37815123 37816028 -161814122 - L2 LINE L2 -48 3224 2273 762 205 165 5 chr5 37816054 37816254 -161813896 + MIR SINE MIR 15 246 -16 362 291 107 53 chr5 37816294 37816807 -161813343 - L2 LINE L2 -1075 2239 1608 1877 166 94 0 chr5 37817942 37818249 -161811901 - MER1B DNA MER1_type -1 336 1 3666 95 36 16 chr5 37818334 37818838 -161811312 + MER75 DNA T2_type 1 514 0 237 224 15 15 chr5 37818855 37818922 -161811228 - Charlie7 DNA MER1_type -34 2578 2512 291 171 92 0 chr5 37818937 37819013 -161811137 - Charlie7 DNA MER1_type -2470 142 60 2318 72 7 0 chr5 37821583 37821874 -161808276 + AluSp SINE Alu 1 293 -20 26 0 0 0 chr5 37824066 37824092 -161806058 + AT_rich Low_complexity Low_complexity 1 26 0 1969 102 0 42 chr5 37824163 37824299 -161805851 + AluSx SINE Alu 1 120 -192 2379 102 0 0 chr5 37824299 37824604 -161805546 + AluSc SINE Alu 1 305 -4 1969 102 0 42 chr5 37824604 37824751 -161805399 + AluSx SINE Alu 120 272 -40 1912 159 65 3 chr5 37824780 37825133 -161805017 + L1MA8 LINE L1 5917 6291 0 774 176 162 31 chr5 37825264 37825486 -161804664 + L1MD3 LINE L1 7745 7995 0 242 211 0 0 chr5 37825610 37825667 -161804483 - L1ME4a LINE L1 0 6121 6065 2225 94 13 23 chr5 37826187 37826495 -161803655 + AluY SINE Alu 1 305 -6 2289 235 58 20 chr5 37826498 37827164 -161802986 + L1ME1 LINE L1 5449 6299 -35 1069 218 77 2 chr5 37828236 37828586 -161801564 + Charlie4a DNA MER1_type 34 473 -35 890 136 0 0 chr5 37828952 37829102 -161801048 - FLAM_C SINE Alu 0 150 1 1512 132 25 107 chr5 37829497 37829816 -161800334 + AluYb8 SINE Alu 1 293 -25 369 356 59 25 chr5 37830268 37830591 -161799559 - L2 LINE L2 -457 2857 2524 50 92 0 0 chr5 37831280 37831421 -161798729 + AT_rich Low_complexity Low_complexity 1 141 0 291 114 0 0 chr5 37831431 37831475 -161798675 + (TA)n Simple_repeat Simple_repeat 1 44 0 2193 20 0 16 chr5 37831869 37832119 -161798031 - AluY SINE Alu 0 311 66 206 277 15 0 chr5 37832671 37832736 -161797414 + GA-rich Low_complexity Low_complexity 2 67 0 2447 81 0 10 chr5 37833859 37834169 -161795981 + AluSx SINE Alu 1 307 -5 1427 198 55 4 chr5 37834205 37834478 -161795672 + AluJo SINE Alu 2 288 -24 2419 182 51 25 chr5 37836125 37836614 -161793536 - MLT1D LTR MaLR -3 502 1 372 356 153 13 chr5 37836959 37837195 -161792955 - L2 LINE L2 -11 3261 2993 760 317 79 22 chr5 37837334 37837741 -161792409 - L2 LINE L2 -2368 946 517 388 222 28 67 chr5 37838131 37838311 -161791839 - L1ME4a LINE L1 -14 6107 5935 226 208 0 0 chr5 37838300 37838353 -161791797 - L1MC4 LINE L1 -1337 6705 6653 * 273 57 0 0 chr5 37838354 37838389 -161791761 + (CA)n Simple_repeat Simple_repeat 2 36 0 1951 111 0 0 chr5 37838401 37838654 -161791496 - AluSx SINE Alu -26 286 34 1754 168 7 0 chr5 37839199 37839479 -161790671 - AluJb SINE Alu -26 286 5 447 247 96 14 chr5 37842798 37843017 -161787133 - L1MC4 LINE L1 -1916 5892 5656 2390 117 54 20 chr5 37843749 37844100 -161786050 - THE1B LTR MaLR -1 363 1 1795 184 113 76 chr5 37844222 37844707 -161785443 + MLT1D LTR MaLR 3 505 0 253 307 136 34 chr5 37844791 37844879 -161785271 - L2 LINE L2 -32 3240 3144 776 286 78 37 chr5 37844955 37845277 -161784873 + L2 LINE L2 2804 3138 -175 2303 107 10 0 chr5 37845284 37845592 -161784558 - AluSq SINE Alu -2 311 1 497 313 16 0 chr5 37845615 37845743 -161784407 + MER91A DNA MER1_type 49 178 -18 458 318 12 18 chr5 37845777 37845947 -161784203 + L2 LINE L2 3145 3313 0 2223 104 7 3 chr5 37846449 37846746 -161783404 + AluSx SINE Alu 1 298 -14 1783 85 55 27 chr5 37849104 37849397 -161780753 - AluSx SINE Alu -8 304 4 1341 119 30 5 chr5 37850051 37850276 -161779874 + AluSg/x SINE Alu 75 304 0 22 35 0 0 chr5 37850380 37850409 -161779741 + AT_rich Low_complexity Low_complexity 1 29 0 878 237 76 0 chr5 37850509 37850720 -161779430 - MIR SINE MIR -8 254 28 1985 151 10 0 chr5 37850721 37851025 -161779125 - AluJb SINE Alu -3 309 3 1257 183 28 0 chr5 37851056 37851269 -161778881 - MER20 DNA MER1_type 0 219 1 1305 167 139 0 chr5 37851277 37851558 -161778592 - MER33 DNA MER1_type 0 324 5 2332 178 23 16 chr5 37851629 37852057 -161778093 - LTR3 LTR ERVK 0 432 2 1623 138 73 4 chr5 37852057 37852318 -161777832 - AluSx SINE Alu -33 279 1 303 154 39 0 chr5 37852888 37852940 -161777210 - MER66B LTR ERV1 -141 345 292 198 231 154 77 chr5 37853027 37853170 -161776980 - L2 LINE L2 0 3313 3160 246 265 48 24 chr5 37853269 37853352 -161776798 - L2 LINE L2 -220 3052 2968 313 111 0 0 chr5 37853603 37853648 -161776502 - LTR12 LTR ERV1 -318 396 352 198 0 0 0 chr5 37853650 37853672 -161776478 + (A)n Simple_repeat Simple_repeat 1 22 0 196 325 38 12 chr5 37854219 37854299 -161775851 - MIR3 SINE MIR -15 193 112 467 286 170 6 chr5 37854311 37854482 -161775668 - MIR SINE MIR -2 260 62 1444 197 48 7 chr5 37855125 37855414 -161774736 + AluJb SINE Alu 1 301 -11 2467 81 0 7 chr5 37855488 37855798 -161774352 + AluSx SINE Alu 1 308 -4 402 21 0 0 chr5 37855798 37855872 -161774278 + (TG)n Simple_repeat Simple_repeat 1 121 0 402 21 0 0 chr5 37855872 37855919 -161774231 + (TG)n Simple_repeat Simple_repeat 2 48 0 483 135 0 0 chr5 37856622 37856696 -161773454 + L1MA10 LINE L1 6254 6327 -7 279 316 71 65 chr5 37857242 37857410 -161772740 - MIR SINE MIR -79 183 15 990 277 87 27 chr5 37857587 37858149 -161772001 - L2 LINE L2 -4 3309 2698 1676 230 40 44 chr5 37858153 37858749 -161771401 + L1MC5 LINE L1 6923 7516 -445 517 214 125 36 chr5 37858808 37859056 -161771094 + L1MC5 LINE L1 7644 7913 -48 579 288 64 17 chr5 37859067 37859303 -161770847 - L2 LINE L2 -611 2703 2457 405 213 197 16 chr5 37859700 37859827 -161770323 - MIR SINE MIR 0 262 113 273 325 147 45 chr5 37860984 37861249 -161768901 - L2 LINE L2 0 3272 2981 915 154 0 0 chr5 37861266 37861396 -161768754 - FLAM_C SINE Alu -3 130 1 2631 122 8 3 chr5 37861953 37862315 -161767835 - THE1B LTR MaLR 0 364 1 2141 108 4 0 chr5 37862460 37862738 -161767412 + AluSx SINE Alu 1 279 -33 918 261 139 14 chr5 37864610 37865111 -161765039 + L1MC4a LINE L1 5598 6189 -1619 510 189 71 77 chr5 37865282 37865451 -161764699 - MER46A DNA MER2_type -65 171 4 * 1028 150 24 12 chr5 37865308 37865475 -161764675 + MER46A DNA MER2_type 1 169 -67 1574 106 10 0 chr5 37865575 37865783 -161764367 + AluSc SINE Alu 80 289 -20 343 302 71 8 chr5 37866154 37866280 -161763870 - MER5A DNA MER1_type -1 188 55 225 281 45 34 chr5 37866287 37866376 -161763774 - MER5A DNA MER1_type -97 92 3 537 32 0 0 chr5 37866623 37866685 -161763465 + AluY SINE Alu 3 64 -247 520 108 0 0 chr5 37866785 37866859 -161763291 - AluSc SINE Alu -201 108 35 2201 122 10 0 chr5 37866920 37867223 -161762927 + AluJb SINE Alu 1 306 -6 308 325 88 9 chr5 37867383 37867497 -161762653 - MIR SINE MIR -118 144 22 543 228 69 73 chr5 37867519 37867538 -161762612 + MIR SINE MIR 22 40 -222 593 219 50 8 chr5 37867538 37867657 -161762493 - FLAM_A SINE Alu -8 125 2 543 228 69 73 chr5 37867657 37867870 -161762280 + MIR SINE MIR 40 253 -9 721 274 51 8 chr5 37867991 37868225 -161761925 + MIR SINE MIR 12 255 -7 184 333 134 18 chr5 37869259 37869430 -161760720 - L2 LINE L2 -1339 1975 1785 481 295 104 33 chr5 37870133 37870374 -161759776 - MIR SINE MIR 0 262 5 374 206 82 10 chr5 37871151 37871248 -161758902 - Charlie7 DNA MER1_type -2504 108 5 1045 205 186 53 chr5 37871916 37872238 -161757912 + MLT1A1 LTR MaLR 1 365 0 1422 102 0 0 chr5 37872301 37872488 -161757662 - AluY SINE Alu 0 311 125 1480 162 4 4 chr5 37874083 37874318 -161755832 - MLT1A1 LTR MaLR -119 246 12 337 374 8 0 chr5 37874626 37874749 -161755401 - MER5A DNA MER1_type -3 186 63 222 118 0 0 chr5 37875644 37875678 -161754472 + (CATA)n Simple_repeat Simple_repeat 2 35 0 180 0 0 0 chr5 37875904 37875924 -161754226 + (T)n Simple_repeat Simple_repeat 1 20 0 631 290 11 11 chr5 37876098 37876281 -161753869 - MIR SINE MIR -60 202 20 1084 231 61 95 chr5 37876294 37876524 -161753626 - L1MC4 LINE L1 0 8042 7806 1450 189 63 14 chr5 37876524 37876685 -161753465 - AluJb SINE Alu -13 299 116 189 0 0 0 chr5 37876685 37876706 -161753444 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1450 189 63 14 chr5 37876706 37876829 -161753321 - AluJb SINE Alu -196 116 1 1084 231 61 95 chr5 37876829 37877122 -161753028 - L1MC4 LINE L1 -236 7806 7537 6030 162 46 18 chr5 37877529 37877729 -161752421 - L1 LINE L1 -1679 4467 4274 306 50 0 0 chr5 37877729 37877769 -161752381 + (TG)n Simple_repeat Simple_repeat 1 40 0 6030 162 46 18 chr5 37877769 37878764 -161751386 - L1 LINE L1 -1872 4274 3239 1865 151 16 16 chr5 37879218 37879530 -161750620 - AluJb SINE Alu 0 312 1 369 0 0 0 chr5 37879628 37879669 -161750481 + (TG)n Simple_repeat Simple_repeat 2 42 0 544 237 34 8 chr5 37879807 37879925 -161750225 - L2 LINE L2 -5 3308 3188 1984 104 49 3 chr5 37880234 37880521 -161749629 + AluSq SINE Alu 1 300 -13 2193 100 14 0 chr5 37881354 37881643 -161748507 + AluSx SINE Alu 5 297 -15 482 266 6 57 chr5 37882853 37883011 -161747139 - MER5A DNA MER1_type -22 167 18 198 0 0 0 chr5 37883602 37883624 -161746526 + (TGG)n Simple_repeat Simple_repeat 2 23 0 641 234 63 0 chr5 37883666 37883824 -161746326 - MER5B DNA MER1_type -10 168 1 476 251 64 61 chr5 37884936 37885116 -161745034 - MIR SINE MIR -48 214 31 182 313 31 0 chr5 37885775 37885839 -161744311 - L2 LINE L2 -1 3312 3247 335 241 13 13 chr5 37885854 37885933 -161744217 - MIR SINE MIR -28 234 156 684 230 118 6 chr5 37885933 37886094 -161744056 - AluJo SINE Alu -13 299 121 273 269 54 46 chr5 37886350 37886480 -161743670 - L1ME4a LINE L1 -1 6120 5990 346 270 95 14 chr5 37886520 37886668 -161743482 - L1ME4a LINE L1 -205 5916 5757 707 251 31 36 chr5 37888277 37888472 -161741678 - MIR SINE MIR -61 201 8 413 239 0 72 chr5 37888649 37888787 -161741363 - MIR SINE MIR -1 261 134 621 231 82 14 chr5 37888878 37889088 -161741062 - MIR SINE MIR -1 261 32 28 71 0 0 chr5 37890347 37890403 -161739747 + AT_rich Low_complexity Low_complexity 1 56 0 4039 201 96 54 chr5 37890638 37890964 -161739186 + L1ME3A LINE L1 3435 3746 -2400 234 250 0 0 chr5 37890964 37891008 -161739142 - 5S rRNA rRNA -77 44 1 4039 201 96 54 chr5 37891008 37892227 -161737923 + L1ME3A LINE L1 3746 5050 -1096 1181 200 4 39 chr5 37892269 37892524 -161737626 + AluJo SINE Alu 43 288 -24 27 0 0 0 chr5 37892757 37892784 -161737366 + AT_rich Low_complexity Low_complexity 1 27 0 375 275 91 96 chr5 37892837 37893012 -161737138 + L1ME3A LINE L1 5638 5814 -356 2247 104 0 0 chr5 37893012 37893319 -161736831 + AluSx SINE Alu 1 307 -5 375 275 91 96 chr5 37893319 37893442 -161736708 + L1ME3A LINE L1 5814 5936 -234 269 242 33 22 chr5 37894063 37894154 -161735996 + L1M4 LINE L1 784 875 -5667 1060 177 100 9 chr5 37894216 37894436 -161735714 + L1MCa LINE L1 17 256 -6170 8472 196 55 69 chr5 37894438 37894808 -161735342 + L1MCa LINE L1 1800 2174 -4252 957 206 0 0 chr5 37894808 37894973 -161735177 + FRAM SINE Alu 1 165 -1 8472 196 55 69 chr5 37894973 37895505 -161734645 + L1MCa LINE L1 2174 2712 -3714 3185 79 56 7 chr5 37895505 37895937 -161734213 - MLT2A2 LTR ERVL 0 453 1 8472 196 55 69 chr5 37895937 37897013 -161733137 + L1MCa LINE L1 2712 3801 -2625 1607 79 5 0 chr5 37897013 37897227 -161732923 + L1PA7 LINE L1 5936 6150 -4 8472 196 55 69 chr5 37897227 37897642 -161732508 + L1MCa LINE L1 3801 4220 -2206 2300 109 0 0 chr5 37897642 37897955 -161732195 - AluSq SINE Alu 0 313 1 8472 196 55 69 chr5 37897955 37898451 -161731699 + L1MCa LINE L1 4220 4721 -1705 754 197 8 0 chr5 37898451 37898583 -161731567 + FLAM_A SINE Alu 1 133 0 8472 196 55 69 chr5 37898583 37898864 -161731286 + L1MCa LINE L1 4721 5054 -1372 3764 156 31 9 chr5 37898864 37899565 -161730585 + L1PB4 LINE L1 5437 6153 -3 2077 104 0 0 chr5 37899947 37900227 -161729923 + AluSc SINE Alu 1 280 -29 430 223 128 38 chr5 37900327 37900538 -161729612 - LTR30 LTR ERV1 -256 466 237 1749 198 17 83 chr5 37900736 37901205 -161728945 - MER57-int LTR ERV1 -1716 5821 5384 355 140 0 0 chr5 37901205 37901255 -161728895 + AluJ/FRAM SINE Alu 233 282 -20 234 167 0 0 chr5 37901223 37901259 -161728891 + Alu SINE Alu 84 119 -14 * 1837 138 0 10 chr5 37902198 37902487 -161727663 + AluJo SINE Alu 9 294 -18 1444 169 0 37 chr5 37902869 37903142 -161727008 - AluJo SINE Alu -22 290 28 185 0 40 0 chr5 37903232 37903257 -161726893 + (TTG)n Simple_repeat Simple_repeat 2 27 0 444 85 0 0 chr5 37903699 37903758 -161726392 + AluSg SINE Alu 2 60 -252 2221 106 0 0 chr5 37903830 37904133 -161726017 + AluSq SINE Alu 1 303 -10 1726 114 0 0 chr5 37904321 37904566 -161725584 + AluSg SINE Alu 62 306 -4 726 213 54 58 chr5 37904640 37904794 -161725356 - L2 LINE L2 -3 3310 3156 1609 138 66 14 chr5 37904794 37905083 -161725067 + AluJo SINE Alu 1 304 -8 726 213 54 58 chr5 37905083 37905168 -161724982 - L2 LINE L2 -157 3156 3072 1669 128 38 7 chr5 37905168 37905360 -161724790 - AluSq SINE Alu -14 299 114 1579 109 0 4 chr5 37905360 37905590 -161724560 - AluSg/x SINE Alu -3 309 81 1669 128 38 7 chr5 37905590 37905602 -161724548 - AluSq SINE Alu -199 114 104 3667 196 30 49 chr5 37905602 37906576 -161723574 - LTR5 LTR ERVK -14 955 1 1669 128 38 7 chr5 37906576 37906660 -161723490 - AluSq SINE Alu -209 104 1 1945 128 7 0 chr5 37907931 37908220 -161721930 + AluSq SINE Alu 1 291 -22 909 147 40 17 chr5 37908238 37908415 -161721735 + AluSx SINE Alu 1 181 -131 326 162 40 27 chr5 37908415 37908489 -161721661 + AluY SINE Alu 46 120 -181 1135 149 82 85 chr5 37908675 37908785 -161721365 + AluJo SINE Alu 19 128 -184 2030 117 3 10 chr5 37908785 37909083 -161721067 + AluSq SINE Alu 1 296 -17 1135 149 82 85 chr5 37909083 37909254 -161720896 + AluJo SINE Alu 128 299 -13 347 251 182 5 chr5 37909584 37909771 -161720379 + L1M4 LINE L1 4080 4299 -1847 224 226 16 0 chr5 37909771 37909833 -161720317 + (CA)n Simple_repeat Simple_repeat 2 64 0 2087 105 7 3 chr5 37909841 37910136 -161720014 - AluSx SINE Alu -16 296 1 1452 158 34 47 chr5 37910585 37910883 -161719267 - AluJb SINE Alu -10 302 9 1192 215 134 51 chr5 37910928 37911186 -161718964 + L1M4 LINE L1 4385 4620 -1526 2269 99 0 0 chr5 37911186 37911490 -161718660 + AluSx SINE Alu 1 304 -8 1192 215 134 51 chr5 37911490 37911546 -161718604 + L1M4 LINE L1 4620 4670 -1476 2606 36 0 0 chr5 37911546 37911851 -161718299 + AluY SINE Alu 1 305 -6 1192 215 134 51 chr5 37911851 37912148 -161718002 + L1M4 LINE L1 4670 5048 -1098 1078 191 106 0 chr5 37912252 37912488 -161717662 + MER57A LTR ERV1 142 402 -1 323 307 155 28 chr5 37912517 37912859 -161717291 + L2 LINE L2 2707 3091 -181 241 254 34 0 chr5 37912917 37912976 -161717174 - MIR SINE MIR -19 243 183 376 315 18 67 chr5 37912988 37913153 -161716997 + L2 LINE L2 3116 3272 0 213 263 158 0 chr5 37913242 37913318 -161716832 + MIR SINE MIR 162 249 -13 2067 137 0 9 chr5 37913971 37914286 -161715864 + AluSx SINE Alu 1 312 0 200 214 24 0 chr5 37914468 37914510 -161715640 + (CA)n Simple_repeat Simple_repeat 1 43 0 204 265 30 90 chr5 37914585 37914694 -161715456 - L2 LINE L2 -12 3301 3204 180 77 0 0 chr5 37914694 37914720 -161715430 + (CAAT)n Simple_repeat Simple_repeat 3 28 0 204 265 30 90 chr5 37914720 37914776 -161715374 - L2 LINE L2 -109 3204 3146 455 283 17 11 chr5 37914856 37915033 -161715117 + (TGAA)n Simple_repeat Simple_repeat 3 180 0 237 119 0 0 chr5 37915097 37915139 -161715011 + (TGAA)n Simple_repeat Simple_repeat 2 43 0 1261 216 0 8 chr5 37915339 37915594 -161714556 + L1PB4 LINE L1 5892 6144 -12 1790 89 0 0 chr5 37915595 37915831 -161714319 + AluY SINE Alu 60 295 -16 213 292 0 26 chr5 37916347 37916460 -161713690 + CT-rich Low_complexity Low_complexity 1 110 0 310 377 0 22 chr5 37916525 37916708 -161713442 + CT-rich Low_complexity Low_complexity 2 180 0 * 345 343 0 23 chr5 37916597 37916769 -161713381 + C-rich Low_complexity Low_complexity 1 168 0 457 286 15 23 chr5 37917228 37917361 -161712789 + MER57-int LTR ERV1 5825 5956 -1581 1058 247 13 0 chr5 37917442 37917673 -161712477 + MER57-int LTR ERV1 5966 6199 -1338 755 154 0 0 chr5 37918233 37918343 -161711807 + FLAM_C SINE Alu 2 111 -32 212 59 29 0 chr5 37918349 37918383 -161711767 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 1877 115 51 90 chr5 37919223 37919406 -161710744 + THE1C LTR MaLR 1 163 -212 189 0 0 0 chr5 37919406 37919427 -161710723 + (TC)n Simple_repeat Simple_repeat 1 21 0 1877 115 51 90 chr5 37919427 37919633 -161710517 + THE1C LTR MaLR 163 375 0 918 275 21 74 chr5 37919846 37919981 -161710169 + MER57-int LTR ERV1 6794 6935 -602 1992 113 3 13 chr5 37919981 37920282 -161709868 + AluJb SINE Alu 1 298 -14 918 275 21 74 chr5 37920282 37920524 -161709626 + MER57-int LTR ERV1 6935 7151 -386 255 220 0 0 chr5 37920529 37920579 -161709571 + MER57A LTR ERV1 42 91 -312 2138 119 0 0 chr5 37920593 37920903 -161709247 - AluSx SINE Alu -2 310 1 996 110 0 0 chr5 37920903 37921039 -161709111 - AluSq/x SINE Alu -177 136 1 26 0 0 0 chr5 37921110 37921136 -161709014 + AT_rich Low_complexity Low_complexity 1 26 0 336 250 145 40 chr5 37923072 37923196 -161706954 + MIR SINE MIR 114 250 -12 579 272 179 37 chr5 37923224 37923850 -161706300 - L2 LINE L2 0 3313 2602 1517 252 155 31 chr5 37923890 37924082 -161706068 - L1ME3A LINE L1 -3 6167 6000 2107 111 0 3 chr5 37924082 37924380 -161705770 - AluSg SINE Alu -13 297 1 1517 252 155 31 chr5 37924380 37924730 -161705420 - L1ME3A LINE L1 -170 6000 5558 669 152 9 0 chr5 37924730 37924835 -161705315 - Tigger7 DNA MER2_type 0 2487 2382 1196 216 5 0 chr5 37924848 37925056 -161705094 - Tigger7 DNA MER2_type -503 230 22 2452 74 0 0 chr5 37925057 37925367 -161704783 + AluY SINE Alu 1 310 -1 1489 77 0 15 chr5 37925496 37925691 -161704459 - MER107 DNA MER1_type -1 196 5 201 245 11 96 chr5 37925736 37925830 -161704320 + L3b LINE CR1 1208 1293 -290 342 224 46 40 chr5 37926391 37926543 -161703607 + (CAGAGA)n Simple_repeat Simple_repeat 2 154 0 1119 174 0 14 chr5 37926578 37926856 -161703294 + AluJo SINE Alu 1 310 0 335 325 6 6 chr5 37927285 37927364 -161702786 + GA-rich Low_complexity Low_complexity 2 80 -90 1995 132 7 0 chr5 37927364 37927667 -161702483 + AluSx SINE Alu 1 305 -7 335 325 6 6 chr5 37927667 37927756 -161702394 + GA-rich Low_complexity Low_complexity 79 170 0 1509 149 37 34 chr5 37928001 37928296 -161701854 - AluJo SINE Alu -12 300 5 559 297 55 34 chr5 37928401 37928614 -161701536 + MIR SINE MIR 5 211 -51 364 305 6 11 chr5 37929080 37929257 -161700893 + GA-rich Low_complexity Low_complexity 1 176 0 1191 105 0 6 chr5 37929305 37929477 -161700673 - AluSc SINE Alu -7 302 132 2243 102 0 7 chr5 37929479 37929783 -161700367 - AluSx SINE Alu -10 302 1 24 0 0 0 chr5 37929909 37929933 -161700217 + AT_rich Low_complexity Low_complexity 1 24 0 1331 146 0 9 chr5 37930074 37930293 -161699857 - AluSg/x SINE Alu -13 299 83 279 353 20 33 chr5 37930305 37930458 -161699692 - MER5A DNA MER1_type -5 184 34 306 238 12 0 chr5 37930475 37930555 -161699595 + L1ME4a LINE L1 5961 6041 -80 378 184 94 0 chr5 37930810 37930899 -161699251 - FLAM_A SINE Alu -5 128 43 2065 109 3 31 chr5 37930914 37931234 -161698916 - AluSx SINE Alu 0 312 2 276 30 0 0 chr5 37931249 37931282 -161698868 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 1955 98 14 0 chr5 37931282 37931558 -161698592 - AluSx SINE Alu -32 280 1 2407 67 0 0 chr5 37932047 37932347 -161697803 - AluY SINE Alu -11 300 1 532 163 0 0 chr5 37932474 37932554 -161697596 - AluJb SINE Alu -187 125 46 492 18 0 0 chr5 37932689 37932741 -161697409 + (TTTA)n Simple_repeat Simple_repeat 1 109 0 492 18 0 0 chr5 37932741 37932798 -161697352 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 1571 119 34 72 chr5 37932800 37933093 -161697057 - AluSx SINE Alu -30 282 1 847 165 0 0 chr5 37933250 37933383 -161696767 - FLAM_C SINE Alu 0 133 1 828 201 52 44 chr5 37934254 37934268 -161695882 - MIR SINE MIR -22 240 228 436 97 0 86 chr5 37934268 37934315 -161695835 - L1PA11 LINE L1 -4 6170 6133 2403 71 3 3 chr5 37934315 37934625 -161695525 - AluSp SINE Alu -3 310 1 436 97 0 86 chr5 37934625 37934670 -161695480 - L1PA11 LINE L1 -41 6133 6086 828 201 52 44 chr5 37934670 37934884 -161695266 - MIR SINE MIR -34 228 10 401 265 88 24 chr5 37934886 37935056 -161695094 + L2 LINE L2 2775 2955 -359 183 80 0 0 chr5 37936551 37936576 -161693574 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 239 246 115 0 chr5 37936852 37936913 -161693237 - MIR SINE MIR -118 144 77 257 105 0 0 chr5 37937258 37937296 -161692854 + Alu SINE Alu 257 294 -8 31 44 0 0 chr5 37937308 37937353 -161692797 + AT_rich Low_complexity Low_complexity 1 45 0 800 220 70 15 chr5 37937596 37937796 -161692354 + MIR SINE MIR 28 238 -24 410 205 179 70 chr5 37937812 37937869 -161692281 - MIR SINE MIR -54 208 159 1766 153 10 0 chr5 37937869 37938164 -161691986 - AluJo SINE Alu -14 298 1 410 205 179 70 chr5 37938164 37938262 -161691888 - MIR SINE MIR -103 159 36 680 153 8 6 chr5 37939110 37939373 -161690777 + AluJ SINE Alu 1 312 0 2258 83 0 3 chr5 37939597 37939899 -161690251 - AluY SINE Alu -1 310 10 1443 162 23 50 chr5 37939917 37940220 -161689930 - AluJo SINE Alu -17 295 1 517 181 60 26 chr5 37940229 37940345 -161689805 - MIR SINE MIR -111 151 32 1504 139 10 68 chr5 37940374 37940555 -161689595 - AluJb SINE Alu -5 307 148 2075 110 0 29 chr5 37940555 37940863 -161689287 - AluSx SINE Alu -13 299 1 1504 139 10 68 chr5 37940863 37940975 -161689175 - AluJb SINE Alu -164 148 31 2126 108 0 40 chr5 37941243 37941568 -161688582 - AluSx SINE Alu 0 312 1 182 91 30 0 chr5 37941982 37942015 -161688135 + GA-rich Low_complexity Low_complexity 1 34 0 185 194 0 48 chr5 37942253 37942315 -161687835 + GA-rich Low_complexity Low_complexity 2 60 0 1602 140 0 0 chr5 37942346 37942574 -161687576 + AluJb SINE Alu 47 274 -38 211 120 20 40 chr5 37942579 37942629 -161687521 + GA-rich Low_complexity Low_complexity 3 51 0 655 194 31 0 chr5 37942635 37942764 -161687386 + FLAM_A SINE Alu 1 133 0 553 200 50 17 chr5 37942796 37942916 -161687234 - L2 LINE L2 -3 3310 3187 202 279 39 19 chr5 37943241 37943345 -161686805 + (CAGAGA)n Simple_repeat Simple_repeat 4 109 0 199 140 40 0 chr5 37943346 37943396 -161686754 + GA-rich Low_complexity Low_complexity 1 52 0 1897 167 0 3 chr5 37943430 37943724 -161686426 + AluJo SINE Alu 1 293 -19 592 238 97 7 chr5 37944013 37944208 -161685942 + MER57A LTR ERV1 206 403 0 2170 121 7 0 chr5 37945139 37945429 -161684721 + AluSx SINE Alu 1 292 -20 4304 179 32 53 chr5 37945613 37946589 -161683561 + LTR5 LTR ERVK 1 955 -14 454 246 98 16 chr5 37947823 37947945 -161682205 - MIR SINE MIR -50 212 81 304 183 56 56 chr5 37947955 37948026 -161682124 + MER33 DNA MER1_type 1 71 -253 1339 145 85 0 chr5 37948027 37948275 -161681875 + L1PB4 LINE L1 5710 5978 -178 852 258 9 13 chr5 37948273 37948506 -161681644 - L1M4 LINE L1 -2012 4134 3903 * 3261 97 15 28 chr5 37948508 37949560 -161680590 - MER11A LTR ERVK 0 1266 139 1215 20 0 20 chr5 37949877 37950024 -161680126 - L1PA5 LINE L1 -4 6150 6007 3853 36 2 0 chr5 37950024 37950497 -161679653 - L1PA5 LINE L1 -359 5795 5322 1342 38 0 0 chr5 37950497 37950657 -161679493 - L1PA4 LINE L1 -6 6149 5990 1298 38 0 0 chr5 37950657 37950817 -161679333 + L1PA4 LINE L1 5820 5979 -176 * 4494 73 9 3 chr5 37950807 37951453 -161678697 - L1PA5 LINE L1 -815 5331 4682 612 116 4 128 chr5 37951581 37951823 -161678327 + LTR15 LTR ERV1 230 441 -52 295 95 0 143 chr5 37951896 37952001 -161678149 + AluJo SINE Alu 50 139 -163 1192 141 0 35 chr5 37952213 37952411 -161677739 + AluSx SINE Alu 1 191 -121 914 74 99 0 chr5 37952633 37952754 -161677396 + AluSq/x SINE Alu 1 133 -179 1413 151 72 82 chr5 37952759 37952889 -161677261 + AluJo SINE Alu 1 131 -181 2073 121 3 13 chr5 37952889 37953187 -161676963 + AluSq SINE Alu 1 295 -18 1413 151 72 82 chr5 37953187 37953361 -161676789 + AluJo SINE Alu 131 302 -10 240 210 16 0 chr5 37953875 37953937 -161676213 + (CA)n Simple_repeat Simple_repeat 2 64 0 2265 98 7 3 chr5 37953945 37954240 -161675910 - AluSx SINE Alu -16 296 1 1639 159 32 45 chr5 37954686 37954995 -161675155 - AluJb SINE Alu -7 305 1 1590 225 112 36 chr5 37955032 37955296 -161674854 + L1M4 LINE L1 4385 4628 -1518 2248 115 0 0 chr5 37955296 37955592 -161674558 + AluSx SINE Alu 1 296 -16 1590 225 112 36 chr5 37955592 37955990 -161674160 + L1M4 LINE L1 4628 5097 -1049 573 195 17 17 chr5 37956150 37956324 -161673826 + CT-rich Low_complexity Low_complexity 3 176 0 207 0 0 0 chr5 37956329 37956352 -161673798 + (TTCC)n Simple_repeat Simple_repeat 2 24 0 2204 128 0 3 chr5 37956360 37956658 -161673492 - AluJb SINE Alu -15 297 1 4693 143 24 24 chr5 37956682 37957572 -161672578 - L1MA3 LINE L1 -25 6280 5391 2490 146 65 2 chr5 37957572 37957975 -161672175 + MSTA LTR MaLR 1 428 0 2212 111 0 10 chr5 37957986 37958283 -161671867 - AluSx SINE Alu -13 299 6 304 75 0 0 chr5 37958284 37958324 -161671826 + MSTA LTR MaLR 388 427 -1 4052 183 7 11 chr5 37958325 37959193 -161670957 - L1MA3 LINE L1 -751 5395 4532 1852 156 0 0 chr5 37959194 37959469 -161670681 - AluSx SINE Alu -37 275 1 3129 163 24 0 chr5 37959470 37960230 -161669920 - L1MC/D LINE L1 -543 5801 5028 1846 108 40 0 chr5 37960417 37960668 -161669482 - AluSc SINE Alu -48 261 1 836 128 0 8 chr5 37960668 37960785 -161669365 - AluSq/x SINE Alu -197 116 1 2486 74 3 0 chr5 37960795 37961091 -161669059 - AluSp SINE Alu -16 297 1 2484 71 10 0 chr5 37961091 37961388 -161668762 - AluSc SINE Alu -9 300 1 579 318 77 24 chr5 37961389 37961901 -161668249 - L2 LINE L2 -233 3080 2542 278 276 86 69 chr5 37961904 37961944 -161668206 + L2 LINE L2 2626 2664 -608 2423 62 0 23 chr5 37961944 37962249 -161667901 - AluY SINE Alu 0 311 14 2056 129 0 43 chr5 37962249 37962438 -161667712 - AluSx SINE Alu -1 311 140 2390 85 0 7 chr5 37962438 37962744 -161667406 - AluSc SINE Alu -5 304 1 2056 129 0 43 chr5 37962744 37962879 -161667271 - AluSx SINE Alu -172 140 1 278 276 86 69 chr5 37962879 37963219 -161666931 + L2 LINE L2 2663 3040 -232 1877 138 24 7 chr5 37963231 37963522 -161666628 - AluSx SINE Alu -16 296 1 554 194 78 8 chr5 37963645 37963774 -161666376 - L2 LINE L2 -719 2595 2458 517 257 49 7 chr5 37963825 37963969 -161666181 + MIR SINE MIR 113 262 0 770 130 32 186 chr5 37964243 37964359 -161665791 - L1MB5 LINE L1 -8 6166 6108 2280 114 13 0 chr5 37964359 37964666 -161665484 - AluSx SINE Alu -1 311 1 770 130 32 186 chr5 37964666 37964802 -161665348 - L1MB5 LINE L1 -66 6108 5953 2145 128 3 19 chr5 37964818 37965130 -161665020 - AluJb SINE Alu -5 307 1 185 35 69 0 chr5 37965130 37965159 -161664991 + T-rich Low_complexity Low_complexity 2 32 0 1021 149 70 152 chr5 37965164 37965234 -161664916 - AluJo SINE Alu 0 302 228 2145 104 0 0 chr5 37965234 37965559 -161664591 + AluSg SINE Alu 2 326 0 1021 149 70 152 chr5 37965559 37965656 -161664494 - AluJo SINE Alu -74 228 125 2211 97 10 19 chr5 37965656 37965965 -161664185 - AluSq SINE Alu -7 306 1 1021 149 70 152 chr5 37965965 37966122 -161664028 - AluJo SINE Alu -177 125 1 374 238 69 0 chr5 37966133 37966234 -161663916 + MER112 DNA MER1_type 116 223 -37 421 192 64 0 chr5 37966244 37966322 -161663828 - MER5B DNA MER1_type -22 156 74 778 112 0 9 chr5 37966346 37966453 -161663697 - FLAM_C SINE Alu -25 118 13 2164 88 3 79 chr5 37966453 37966782 -161663368 + AluY SINE Alu 1 304 -7 255 203 40 40 chr5 37966782 37966856 -161663294 + MER5B DNA MER1_type 104 177 -1 360 0 0 0 chr5 37966958 37966998 -161663152 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2216 88 11 0 chr5 37967000 37967283 -161662867 - AluSg SINE Alu -24 286 1 252 0 0 0 chr5 37967284 37967312 -161662838 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2224 102 3 0 chr5 37967312 37967595 -161662555 - AluSp SINE Alu -29 284 1 1900 153 7 3 chr5 37967597 37967885 -161662265 - AluJb SINE Alu -19 293 5 2265 113 3 3 chr5 37968616 37968927 -161661223 - AluSp SINE Alu -2 311 1 1607 185 3 24 chr5 37969402 37969700 -161660450 + AluJo SINE Alu 1 292 -20 227 229 0 0 chr5 37970072 37970120 -161660030 - Alu SINE Alu -168 134 87 192 77 0 0 chr5 37970659 37970685 -161659465 + (CCCCG)n Simple_repeat Simple_repeat 1 26 0 226 191 44 0 chr5 37970742 37970810 -161659340 + (CGGGG)n Simple_repeat Simple_repeat 3 73 0 220 270 0 44 chr5 37970862 37970999 -161659151 + (CGGGG)n Simple_repeat Simple_repeat 1 131 0 * 267 283 11 28 chr5 37970920 37971100 -161659050 + G-rich Low_complexity Low_complexity 4 180 0 334 300 84 14 chr5 37972687 37972843 -161657307 + MIR SINE MIR 35 200 -62 240 319 8 35 chr5 37975431 37975608 -161654542 + CT-rich Low_complexity Low_complexity 1 172 0 591 15 0 0 chr5 37975614 37975682 -161654468 + (TC)n Simple_repeat Simple_repeat 1 68 0 596 97 0 6 chr5 37977840 37978080 -161652070 + AluSx SINE Alu 1 288 -22 703 175 0 16 chr5 37978111 37978237 -161651913 + FLAM_A SINE Alu 6 129 -13 697 113 40 8 chr5 37980302 37980426 -161649724 + L1MC2 LINE L1 6066 6193 -151 257 336 107 7 chr5 37981015 37981155 -161648995 - MIR SINE MIR 0 262 109 234 164 73 0 chr5 37981504 37981559 -161648591 - L1M4 LINE L1 -966 5180 5122 4107 160 24 21 chr5 37981827 37982655 -161647495 + L1MC2 LINE L1 4962 5793 -551 2100 138 3 10 chr5 37982655 37982967 -161647183 + AluSx SINE Alu 1 310 -2 4107 160 24 21 chr5 37982967 37983176 -161646974 + L1MC2 LINE L1 5793 6000 -344 691 164 109 0 chr5 37983173 37983301 -161646849 - L1M1 LINE L1 -6007 1558 1417 * 4992 196 11 61 chr5 37983302 37983839 -161646311 + L1MA3 LINE L1 3840 4402 -1744 1313 156 0 19 chr5 37983839 37984050 -161646100 + AluJb SINE Alu 85 291 -21 4992 196 11 61 chr5 37984050 37985069 -161645081 + L1MA3 LINE L1 4402 5395 -751 304 75 0 0 chr5 37985070 37985110 -161645040 - MSTA LTR MaLR -1 427 388 2218 96 17 7 chr5 37985111 37985404 -161644746 + AluSx SINE Alu 6 301 -11 2609 140 54 2 chr5 37985415 37985822 -161644328 - MSTA LTR MaLR 0 428 1 4914 142 24 7 chr5 37985822 37986703 -161643447 + L1MA3 LINE L1 5391 6286 -19 2180 131 0 3 chr5 37986721 37987018 -161643132 + AluJb SINE Alu 1 296 -16 657 203 17 11 chr5 37987026 37987203 -161642947 + GA-rich Low_complexity Low_complexity 1 178 0 246 94 0 0 chr5 37987203 37987235 -161642915 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 529 109 0 6 chr5 37989597 37989837 -161640313 + AluSx SINE Alu 1 287 -22 601 194 0 0 chr5 37989868 37989971 -161640179 + FLAM_A SINE Alu 6 108 -34 1385 125 0 5 chr5 37990267 37990459 -161639691 - AluSx SINE Alu -121 191 1 1785 146 0 0 chr5 37990462 37990715 -161639435 - AluJo SINE Alu -10 302 50 2913 100 20 11 chr5 37990722 37991172 -161638978 - LTR15 LTR ERV1 -6 487 34 1251 134 0 6 chr5 37991329 37991508 -161638642 - AluSg/x SINE Alu -16 294 117 418 160 0 0 chr5 37991508 37991583 -161638567 + Alu SINE Alu 234 308 -3 337 286 85 54 chr5 37992100 37992303 -161637847 - MIR SINE MIR -18 244 32 2179 117 7 7 chr5 37992303 37992602 -161637548 - AluSx SINE Alu -13 299 1 337 286 85 54 chr5 37992602 37992622 -161637528 - MIR SINE MIR -230 32 14 1096 194 85 32 chr5 37993068 37993316 -161636834 - AluJo SINE Alu -15 297 37 419 287 93 16 chr5 37993324 37993582 -161636568 + L1ME LINE L1 5521 5798 -323 2428 65 0 0 chr5 37993633 37993924 -161636226 - AluY SINE Alu -20 291 1 591 312 43 4 chr5 37993924 37994158 -161635992 - LTR33 LTR ERVL -65 456 214 391 229 86 50 chr5 37994187 37994327 -161635823 - LTR33 LTR ERVL -376 145 1 1903 156 7 0 chr5 37994337 37994620 -161635530 + AluSg SINE Alu 15 299 -11 2862 157 5 74 chr5 37994829 37995091 -161635059 + L1PA16 LINE L1 5512 5791 -375 2109 135 0 13 chr5 37995091 37995403 -161634747 + AluSx SINE Alu 1 308 -4 2862 157 5 74 chr5 37995403 37995759 -161634391 + L1PA16 LINE L1 5791 6093 -73 972 194 83 12 chr5 37995867 37996109 -161634041 + MLT1D LTR MaLR 180 438 -67 273 98 0 0 chr5 37996116 37996157 -161633993 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 1591 189 0 14 chr5 37996167 37996442 -161633708 - AluJo SINE Alu -41 271 1 1183 189 9 0 chr5 37996443 37996660 -161633490 - MLT1D LTR MaLR -286 219 1 459 310 38 16 chr5 37996720 37996904 -161633246 - MIR SINE MIR -69 193 6 1354 173 46 25 chr5 37996939 37997074 -161633076 + AluJb SINE Alu 1 132 -180 1882 128 58 7 chr5 37997074 37997348 -161632802 + AluSx SINE Alu 1 288 -24 1354 173 46 25 chr5 37997348 37997496 -161632654 + AluJb SINE Alu 132 290 -22 655 175 0 16 chr5 37997527 37997653 -161632497 + FLAM_A SINE Alu 6 129 -13 692 120 32 8 chr5 37999718 37999843 -161630307 + L1MC2 LINE L1 6066 6193 -151 260 331 40 20 chr5 38000431 38000582 -161629568 - MIR SINE MIR 0 262 109 234 148 74 0 chr5 38000935 38000989 -161629161 - L1M4 LINE L1 -966 5180 5123 870 92 64 21 chr5 38001159 38001300 -161628850 - AluSx SINE Alu -135 177 31 1474 115 0 5 chr5 38001521 38001713 -161628437 - AluSx SINE Alu -121 191 1 1741 150 0 4 chr5 38001716 38001969 -161628181 - AluJo SINE Alu -11 301 50 2868 109 20 11 chr5 38001976 38002426 -161627724 - LTR15 LTR ERV1 -6 487 34 1249 135 0 6 chr5 38002583 38002761 -161627389 - AluSg/x SINE Alu -17 295 119 416 147 0 0 chr5 38002761 38002836 -161627314 + Alu SINE Alu 235 309 -3 310 308 86 41 chr5 38003345 38003545 -161626605 - MIR SINE MIR -18 244 32 2328 102 7 3 chr5 38003545 38003848 -161626302 - AluSx SINE Alu -8 304 1 310 308 86 41 chr5 38003848 38003868 -161626282 - MIR SINE MIR -230 32 14 1171 169 83 51 chr5 38004319 38004573 -161625577 - AluJo SINE Alu -14 298 37 524 296 86 15 chr5 38004581 38004848 -161625302 + L1MC/D LINE L1 5521 5806 -2002 558 291 78 26 chr5 38004848 38004899 -161625251 - LTR33 LTR ERVL -8 513 466 2383 107 0 0 chr5 38004899 38005208 -161624942 - AluY SINE Alu -2 309 1 558 291 78 26 chr5 38005208 38005427 -161624723 - LTR33 LTR ERVL -55 466 229 534 361 9 37 chr5 38005577 38005874 -161624276 - ERVL LTR ERVL -4435 1329 1048 2231 141 0 0 chr5 38005874 38006186 -161623964 - AluSx SINE Alu 0 312 1 534 361 9 37 chr5 38006186 38006345 -161623805 - ERVL LTR ERVL -4716 1048 886 2010 126 25 0 chr5 38006361 38006664 -161623486 + AluSx SINE Alu 1 310 0 470 319 48 35 chr5 38006764 38007016 -161623134 - ERVL LTR ERVL -5095 669 411 1829 191 0 0 chr5 38007016 38007314 -161622836 + AluJo SINE Alu 1 298 -14 470 319 48 35 chr5 38007314 38007375 -161622775 - ERVL LTR ERVL -5353 411 352 243 88 0 0 chr5 38007409 38007443 -161622707 + (TTA)n Simple_repeat Simple_repeat 2 35 0 244 330 34 25 chr5 38007443 38007561 -161622589 - MIR SINE MIR -124 138 20 1706 229 19 65 chr5 38007965 38008440 -161621710 + MSTB2 LTR MaLR 5 457 0 1846 164 0 11 chr5 38008513 38008799 -161621351 + AluSx SINE Alu 3 285 -27 695 276 27 5 chr5 38009037 38009258 -161620892 + L1MC/D LINE L1 5575 5800 -2008 448 222 28 0 chr5 38009258 38009366 -161620784 - LTR33 LTR ERVL 0 521 411 1388 148 20 128 chr5 38009473 38009818 -161620332 + AluYb8 SINE Alu 1 308 0 2245 96 17 10 chr5 38009826 38010127 -161620023 + AluSq SINE Alu 1 303 -10 1866 151 0 7 chr5 38010252 38010558 -161619592 + AluSx SINE Alu 1 304 0 1308 199 57 37 chr5 38010570 38010867 -161619283 + AluJo SINE Alu 3 305 -7 789 138 231 0 chr5 38010888 38011048 -161619102 + MSTA LTR MaLR 1 197 -231 2272 113 3 0 chr5 38011049 38011340 -161618810 + AluSx SINE Alu 1 292 -20 2086 98 27 27 chr5 38011906 38012201 -161617949 + AluSq SINE Alu 1 295 -18 229 288 39 59 chr5 38012227 38012380 -161617770 + MIR SINE MIR 63 212 -50 2216 104 17 0 chr5 38012548 38012847 -161617303 + AluY SINE Alu 1 304 -7 216 288 12 25 chr5 38013626 38013706 -161616444 - MIR3 SINE MIR -6 202 124 * 355 313 187 11 chr5 38013703 38013885 -161616265 - MIR SINE MIR -3 259 46 342 289 84 14 chr5 38015006 38015162 -161614988 + MIR SINE MIR 35 200 -62 2128 18 4 0 chr5 38018111 38018340 -161611810 - SVA Other Other 0 1386 1157 373 282 92 56 chr5 38021844 38022039 -161608111 - MIR SINE MIR -29 233 32 214 363 11 0 chr5 38022300 38022391 -161607759 - MIR SINE MIR -61 147 56 340 268 290 0 chr5 38022477 38022615 -161607535 + MER5B DNA MER1_type 1 178 0 224 172 17 0 chr5 38023121 38023179 -161606971 + G-rich Low_complexity Low_complexity 5 63 0 2121 119 17 0 chr5 38025462 38025757 -161604393 + AluSx SINE Alu 1 300 -12 464 183 5 28 chr5 38027891 38028066 -161602084 + MSR1 Satellite Satellite 1 170 -6 1993 132 44 0 chr5 38028966 38029261 -161600889 - AluSq SINE Alu -5 308 1 420 292 81 44 chr5 38029973 38030226 -161599924 + L1MDa LINE L1 2436 3699 -2841 1330 153 5 0 chr5 38030338 38030566 -161599584 + AluSg/x SINE Alu 87 315 0 636 221 13 27 chr5 38030581 38030730 -161599420 + AluJo SINE Alu 9 155 -157 207 263 0 66 chr5 38032432 38032508 -161597642 - MIR SINE MIR -112 150 80 218 313 31 10 chr5 38033019 38033115 -161597035 + G-rich Low_complexity Low_complexity 4 101 0 364 290 54 21 chr5 38033223 38033409 -161596741 - MIR SINE MIR 0 262 71 4496 145 25 13 chr5 38033956 38035014 -161595136 + L1MC2 LINE L1 4962 6033 -311 2269 85 23 7 chr5 38035020 38035326 -161594824 - AluY SINE Alu 0 311 1 323 48 0 250 chr5 38035327 38035411 -161594739 + MLT1C LTR MaLR 403 465 -2 1306 211 64 43 chr5 38035413 38035612 -161594538 + L1MB8 LINE L1 5748 5941 -237 2230 119 0 0 chr5 38035612 38035907 -161594243 + AluSx SINE Alu 1 295 -17 1306 211 64 43 chr5 38035907 38036129 -161594021 + L1MB8 LINE L1 5941 6178 0 199 352 0 0 chr5 38036435 38036506 -161593644 + L2 LINE L2 3141 3211 -61 2173 106 7 0 chr5 38036586 38036870 -161593280 - AluSc SINE Alu -18 291 6 2211 118 3 7 chr5 38036985 38037291 -161592859 - AluSx SINE Alu -7 305 1 473 276 5 70 chr5 38037717 38037931 -161592219 + LTR16B LTR ERVL 256 455 -9 1999 112 32 11 chr5 38037958 38038257 -161591893 - AluSx SINE Alu 0 305 1 2283 115 0 3 chr5 38038782 38039087 -161591063 + AluSx SINE Alu 1 304 -8 864 276 120 42 chr5 38039166 38039619 -161590531 + L2 LINE L2 2450 2866 -447 2125 132 7 3 chr5 38039619 38039922 -161590228 - AluSx SINE Alu -8 304 1 864 276 120 42 chr5 38039922 38040253 -161589897 + L2 LINE L2 2866 3312 -1 2086 139 0 0 chr5 38040345 38040639 -161589511 + AluSx SINE Alu 1 294 -18 199 370 19 19 chr5 38041567 38041675 -161588475 + MIR SINE MIR 107 214 -48 188 245 0 38 chr5 38041763 38041816 -161588334 - L2 LINE L2 -1 3312 3262 * 195 316 101 87 chr5 38041784 38042002 -161588148 - MIR SINE MIR -14 248 28 2261 119 0 0 chr5 38042015 38042318 -161587832 - AluSx SINE Alu -4 308 6 924 268 92 3 chr5 38042362 38042657 -161587493 + MER58B DNA MER1_type 1 321 -20 231 36 0 0 chr5 38043359 38043387 -161586763 + (CAAAA)n Simple_repeat Simple_repeat 5 32 0 2072 114 38 0 chr5 38043478 38043767 -161586383 - AluSg SINE Alu -10 300 1 310 280 46 46 chr5 38044043 38044209 -161585941 + MIR SINE MIR 88 256 -6 2224 135 0 0 chr5 38044209 38044521 -161585629 - AluSx SINE Alu 0 312 1 1116 244 86 80 chr5 38044774 38045009 -161585141 + MLT1D LTR MaLR 5 237 -268 2000 134 17 0 chr5 38045009 38045308 -161584842 + AluSx SINE Alu 1 304 -8 1116 244 86 80 chr5 38045308 38045559 -161584591 + MLT1D LTR MaLR 237 494 -11 295 289 0 0 chr5 38045649 38045732 -161584418 + MIR SINE MIR 174 256 -6 2244 86 7 0 chr5 38045889 38046189 -161583961 + AluSq SINE Alu 1 302 0 297 0 0 0 chr5 38046421 38046454 -161583696 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 797 112 28 14 chr5 38046536 38046679 -161583471 + L1MB2 LINE L1 6019 6163 -8 896 187 6 12 chr5 38046844 38047010 -161583140 - FRAM SINE Alu -12 164 1 2425 60 0 3 chr5 38047021 38047303 -161582847 - AluY SINE Alu -14 297 17 255 331 29 0 chr5 38047899 38048074 -161582076 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 528 68 0 0 chr5 38048128 38048201 -161581949 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 2330 94 10 0 chr5 38048396 38048694 -161581456 + AluSp SINE Alu 3 303 -10 234 0 0 0 chr5 38048694 38048720 -161581430 + (TA)n Simple_repeat Simple_repeat 2 27 0 221 322 134 45 chr5 38048757 38048845 -161581305 + MIR SINE MIR 21 100 -162 2298 112 0 13 chr5 38048845 38049149 -161581001 - AluSq SINE Alu -13 300 1 221 322 134 45 chr5 38049149 38049262 -161580888 + MIR SINE MIR 100 240 -22 186 325 0 36 chr5 38049688 38049771 -161580379 + MIR3 SINE MIR 127 206 -2 272 274 123 9 chr5 38050577 38050683 -161579467 + MIR SINE MIR 29 146 -116 1952 134 19 29 chr5 38050693 38051006 -161579144 - AluSx SINE Alu -1 311 2 1483 123 13 0 chr5 38051102 38051330 -161578820 - L1MA6 LINE L1 -5 6295 6065 247 273 50 0 chr5 38051659 38051758 -161578392 - MER20B DNA MER1_type -31 752 649 2174 87 25 0 chr5 38052357 38052483 -161577667 + AluSq SINE Alu 1 122 -190 327 49 0 0 chr5 38052483 38052524 -161577626 + (CA)n Simple_repeat Simple_repeat 2 42 0 2174 87 25 0 chr5 38052524 38052702 -161577448 + AluSq SINE Alu 122 312 0 215 204 0 37 chr5 38052709 38052830 -161577320 + GA-rich Low_complexity Low_complexity 1 116 0 638 101 0 50 chr5 38053139 38053238 -161576912 - AluSg/x SINE Alu -18 292 199 674 203 10 58 chr5 38053246 38053282 -161576868 - L1 LINE L1 -3758 2624 2588 2219 78 27 17 chr5 38053282 38053576 -161576574 - AluSc SINE Alu -12 297 1 674 203 10 58 chr5 38053576 38053762 -161576388 - L1 LINE L1 -3794 2588 2410 1516 89 0 0 chr5 38053768 38053959 -161576191 + AluYa5 SINE Alu 110 300 -11 455 130 0 0 chr5 38053959 38054028 -161576122 + AluS SINE Alu 233 301 -10 2091 95 27 27 chr5 38054574 38054870 -161575280 + AluSq SINE Alu 1 296 -17 206 252 37 65 chr5 38054896 38055003 -161575147 + MIR SINE MIR 63 166 -96 2199 102 16 0 chr5 38055217 38055520 -161574630 + AluY SINE Alu 1 308 -3 193 284 30 0 chr5 38056301 38056368 -161573782 - MIR3 SINE MIR -15 193 125 450 198 232 34 chr5 38106632 38106797 -161523353 + MIR SINE MIR 2 198 -36 404 123 0 0 chr5 38106800 38106857 -161523293 - LTR16C LTR ERVL -5 486 430 764 181 9 0 chr5 38107096 38107212 -161522938 - FLAM_A SINE Alu -25 117 1 1006 219 17 0 chr5 38107213 38107391 -161522759 + MER58A DNA MER1_type 42 222 -2 365 259 0 0 chr5 38107402 38107483 -161522667 - LTR16C LTR ERVL -219 272 192 2159 127 0 3 chr5 38107484 38107783 -161522367 + AluSx SINE Alu 1 298 -14 3634 113 43 0 chr5 38107833 38108339 -161521811 + MER1A DNA MER1_type 2 529 0 182 188 0 83 chr5 38108460 38108508 -161521642 - MER5B DNA MER1_type -1 177 134 519 131 48 0 chr5 38108508 38108592 -161521558 - AluSc SINE Alu -8 301 214 2013 78 0 0 chr5 38108592 38108834 -161521316 - AluSc SINE Alu -50 259 18 315 215 6 76 chr5 38108834 38108944 -161521206 - MER5B DNA MER1_type -39 150 45 1849 174 17 26 chr5 38109229 38109579 -161520571 - L1MB5 LINE L1 -8 6166 5820 1379 174 146 0 chr5 38109708 38109859 -161520291 - AluJb SINE Alu -19 283 155 228 35 0 0 chr5 38109859 38109888 -161520262 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1379 174 146 0 chr5 38109888 38109983 -161520167 - AluJb SINE Alu -147 155 1 734 200 8 8 chr5 38110299 38110429 -161519721 - FLAM_A SINE Alu 0 133 4 480 62 0 0 chr5 38111425 38111489 -161518661 + (TG)n Simple_repeat Simple_repeat 2 65 0 1968 111 36 4 chr5 38112372 38112651 -161517499 - AluSq SINE Alu -24 289 2 577 205 96 24 chr5 38112757 38112923 -161517227 - MER5B DNA MER1_type 0 178 1 306 0 0 0 chr5 38113039 38113073 -161517077 + (TC)n Simple_repeat Simple_repeat 1 34 0 2663 107 6 8 chr5 38113347 38113703 -161516447 + THE1A LTR MaLR 1 355 0 12272 96 8 9 chr5 38113703 38115286 -161514864 + THE1A-int LTR MaLR 1 1580 0 2532 118 8 8 chr5 38115286 38115641 -161514509 + THE1A LTR MaLR 1 355 0 351 295 9 9 chr5 38115782 38115894 -161514256 - LTR33A LTR ERVL -402 121 10 228 122 0 0 chr5 38116079 38116120 -161514030 + (CCA)n Simple_repeat Simple_repeat 2 42 0 2163 114 3 3 chr5 38116379 38116686 -161513464 + THE1-int LTR MaLR 929 1235 -345 547 125 0 0 chr5 38116684 38116764 -161513386 - THE1-int LTR MaLR -572 1008 929 * 199 298 0 0 chr5 38117062 38117119 -161513031 - L2 LINE L2 -61 3252 3196 2149 126 0 0 chr5 38117208 38117501 -161512649 + AluSx SINE Alu 3 295 -17 263 314 141 13 chr5 38118079 38118235 -161511915 - MIR3 SINE MIR -5 203 28 1764 135 14 17 chr5 38118240 38118529 -161511621 - AluSx SINE Alu -24 288 1 443 283 139 0 chr5 38118555 38118721 -161511429 - MER5A DNA MER1_type 0 189 1 506 296 129 1 chr5 38119062 38119304 -161510846 - L2 LINE L2 -276 3037 2774 31 76 0 0 chr5 38119304 38119370 -161510780 + AT_rich Low_complexity Low_complexity 1 66 0 335 266 18 28 chr5 38119636 38119745 -161510405 + MIR3 SINE MIR 86 193 -15 1940 137 0 38 chr5 38120398 38120711 -161509439 - AluJb SINE Alu -9 303 3 181 250 39 0 chr5 38120749 38120801 -161509349 + MIR SINE MIR 8 61 -201 289 122 0 0 chr5 38120850 38120891 -161509259 + MADE1 DNA Mariner 40 80 0 349 118 106 12 chr5 38120896 38120981 -161509169 + MIR SINE MIR 106 198 -64 2745 135 28 6 chr5 38121625 38122372 -161507778 + L1MA4A LINE L1 4900 5665 -638 6130 159 22 25 chr5 38122375 38122528 -161507622 + L1MA3 LINE L1 4126 4278 -1868 1854 137 3 56 chr5 38122528 38122850 -161507300 + AluSx SINE Alu 3 307 -5 6130 159 22 25 chr5 38122850 38123906 -161506244 + L1MA3 LINE L1 4278 5332 -814 804 154 8 0 chr5 38123914 38124031 -161506119 + FLAM_C SINE Alu 9 126 -17 6404 98 20 37 chr5 38124040 38124979 -161505171 + L1MA3 LINE L1 5321 6243 -62 1813 176 0 3 chr5 38124979 38125269 -161504881 + AluJb SINE Alu 1 289 -23 6404 98 20 37 chr5 38125269 38125331 -161504819 + L1MA3 LINE L1 6243 6305 0 1971 142 16 7 chr5 38125341 38125644 -161504506 + AluSx SINE Alu 1 306 -6 3021 130 50 75 chr5 38125644 38125952 -161504198 + L1MA4A LINE L1 5661 5975 -328 2332 108 3 0 chr5 38125952 38126258 -161503892 + AluSx SINE Alu 1 307 -5 3021 130 50 75 chr5 38126258 38126601 -161503549 + L1MA4A LINE L1 5975 6297 -6 379 232 211 25 chr5 38126668 38126820 -161503330 - MER5A DNA MER1_type -1 188 9 621 121 0 0 chr5 38126868 38126951 -161503199 + AluJ/FLAM SINE Alu 2 84 -228 594 133 163 0 chr5 38127093 38127191 -161502959 + FLAM_C SINE Alu 4 117 -16 15151 38 3 2 chr5 38127311 38129834 -161500316 + L1PA5 LINE L1 3623 6148 -6 1077 170 6 0 chr5 38129843 38130014 -161500136 + LTR8 LTR ERV1 511 682 -9 279 270 12 20 chr5 38130314 38130562 -161499588 + CT-rich Low_complexity Low_complexity 1 246 0 609 185 0 0 chr5 38130566 38130685 -161499465 + T-rich Low_complexity Low_complexity 1 119 0 928 30 59 44 chr5 38130699 38130834 -161499316 + L1PA5 LINE L1 6018 6154 0 1066 177 16 0 chr5 38131032 38131224 -161498926 + L1M4 LINE L1 5484 5678 -500 3608 92 55 6 chr5 38131225 38131712 -161498438 - MER9 LTR ERVK 0 511 1 11304 103 7 3 chr5 38131721 38133572 -161496578 - HERVK9 LTR ERVK 0 8032 4155 6775 86 3 0 chr5 38133574 38134447 -161495703 - HERVK9 LTR ERVK -2012 3904 3029 * 9332 77 7 0 chr5 38134432 38135620 -161494530 - HERVK9 LTR ERVK -3297 2619 1424 4046 92 10 23 chr5 38135618 38136193 -161493957 - HERVK9 LTR ERVK -5348 568 1 * 3205 123 69 6 chr5 38136193 38136674 -161493476 - MER9 LTR ERVK 0 511 1 2508 189 44 19 chr5 38136675 38137216 -161492934 + L1MB7 LINE L1 5614 6168 -16 1920 152 9 19 chr5 38137352 38137667 -161492483 - AluJb SINE Alu 0 312 1 930 157 18 97 chr5 38137667 38137884 -161492266 - MER20 DNA MER1_type -19 200 1 313 267 155 9 chr5 38137894 38138010 -161492140 + L2 LINE L2 3181 3313 0 2233 115 3 0 chr5 38138136 38138431 -161491719 + AluSx SINE Alu 1 296 -16 203 203 419 0 chr5 38139268 38139342 -161490808 - MIR SINE MIR -118 144 40 237 182 13 26 chr5 38140163 38140240 -161489910 + (TA)n Simple_repeat Simple_repeat 1 76 0 1064 244 168 12 chr5 38141058 38141476 -161488674 - LTR33 LTR ERVL -2 519 37 182 283 50 0 chr5 38141588 38141648 -161488502 + L3b LINE CR1 1431 1493 -90 2497 71 0 3 chr5 38141672 38141982 -161488168 - AluY SINE Alu -2 309 1 457 192 67 129 chr5 38142886 38143079 -161487071 + L1ME3A LINE L1 5988 6168 -2 2216 121 0 16 chr5 38143589 38143896 -161486254 + AluSx SINE Alu 1 302 -10 483 313 26 36 chr5 38144039 38144234 -161485916 - MIR3 SINE MIR -6 202 10 201 288 0 45 chr5 38144247 38144313 -161485837 + MIR SINE MIR 32 94 -168 277 302 78 9 chr5 38144754 38144870 -161485280 + MIR SINE MIR 130 253 -9 304 333 77 19 chr5 38145123 38145279 -161484871 + MIR SINE MIR 23 187 -75 2047 133 3 10 chr5 38145562 38145862 -161484288 + AluSx SINE Alu 1 298 -14 315 49 0 0 chr5 38146268 38146309 -161483841 + (CA)n Simple_repeat Simple_repeat 2 42 0 365 294 17 8 chr5 38146309 38146428 -161483722 - MER5B DNA MER1_type -52 126 7 741 256 128 55 chr5 38146726 38147124 -161483026 - MARNA DNA Mariner -84 502 76 2299 92 0 10 chr5 38147481 38147787 -161482363 - AluSx SINE Alu -9 303 1 432 228 189 43 chr5 38147795 38148076 -161482074 - L1ME4a LINE L1 0 6121 5800 498 17 0 0 chr5 38148930 38148989 -161481161 + (CA)n Simple_repeat Simple_repeat 2 60 0 2530 50 7 0 chr5 38149134 38149435 -161480715 - AluY SINE Alu -8 303 1 2204 84 21 0 chr5 38150910 38151196 -161478954 + AluSx SINE Alu 1 292 -20 1463 169 31 4 chr5 38151237 38151491 -161478659 + AluJo SINE Alu 1 261 -51 969 179 113 15 chr5 38151528 38151723 -161478427 + MER20 DNA MER1_type 1 214 -5 800 11 0 0 chr5 38151728 38151817 -161478333 + 5S rRNA rRNA 2 90 -31 414 293 35 88 chr5 38152014 38152297 -161477853 - L2 LINE L2 -13 3300 3033 1885 144 0 31 chr5 38152716 38153037 -161477113 + AluJb SINE Alu 3 314 0 23 33 0 0 chr5 38153122 38153152 -161476998 + AT_rich Low_complexity Low_complexity 1 30 0 2364 99 0 3 chr5 38155006 38155318 -161474832 + AluSx SINE Alu 1 311 -1 606 290 116 68 chr5 38155373 38156278 -161473872 - L2 LINE L2 -48 3224 2273 762 205 165 5 chr5 38156304 38156504 -161473646 + MIR SINE MIR 15 246 -16 362 291 107 53 chr5 38156544 38157057 -161473093 - L2 LINE L2 -1075 2239 1608 1877 166 94 0 chr5 38158192 38158499 -161471651 - MER1B DNA MER1_type -1 336 1 3666 95 36 16 chr5 38158584 38159088 -161471062 + MER75 DNA T2_type 1 514 0 237 224 15 15 chr5 38159105 38159172 -161470978 - Charlie7 DNA MER1_type -34 2578 2512 291 171 92 0 chr5 38159187 38159263 -161470887 - Charlie7 DNA MER1_type -2470 142 60 2318 72 7 0 chr5 38161833 38162124 -161468026 + AluSp SINE Alu 1 293 -20 26 0 0 0 chr5 38164315 38164341 -161465809 + AT_rich Low_complexity Low_complexity 1 26 0 1969 102 0 42 chr5 38164412 38164548 -161465602 + AluSx SINE Alu 1 120 -192 2379 102 0 0 chr5 38164548 38164853 -161465297 + AluSc SINE Alu 1 305 -4 1969 102 0 42 chr5 38164853 38165000 -161465150 + AluSx SINE Alu 120 272 -40 1912 159 65 3 chr5 38165029 38165382 -161464768 + L1MA8 LINE L1 5917 6291 0 736 176 167 32 chr5 38165513 38165734 -161464416 + L1MD3 LINE L1 7745 7995 0 242 211 0 0 chr5 38165858 38165915 -161464235 - L1ME4a LINE L1 0 6121 6065 2217 94 13 23 chr5 38166435 38166742 -161463408 + AluY SINE Alu 1 304 -7 2289 235 58 20 chr5 38166745 38167411 -161462739 + L1ME1 LINE L1 5449 6299 -35 1069 218 77 2 chr5 38168483 38168833 -161461317 + Charlie4a DNA MER1_type 34 473 -35 890 136 0 0 chr5 38169199 38169349 -161460801 - FLAM_C SINE Alu 0 150 1 1512 132 25 107 chr5 38169744 38170063 -161460087 + AluYb8 SINE Alu 1 293 -25 364 361 56 25 chr5 38170513 38170837 -161459313 - L2 LINE L2 -457 2857 2524 50 92 0 0 chr5 38171526 38171667 -161458483 + AT_rich Low_complexity Low_complexity 1 141 0 291 114 0 0 chr5 38171677 38171721 -161458429 + (TA)n Simple_repeat Simple_repeat 1 44 0 2193 20 0 16 chr5 38172118 38172368 -161457782 - AluY SINE Alu 0 311 66 206 277 15 0 chr5 38172920 38172985 -161457165 + GA-rich Low_complexity Low_complexity 2 67 0 2447 81 0 10 chr5 38174108 38174418 -161455732 + AluSx SINE Alu 1 307 -5 1427 198 55 4 chr5 38174454 38174727 -161455423 + AluJo SINE Alu 2 288 -24 2419 182 51 25 chr5 38176370 38176859 -161453291 - MLT1D LTR MaLR -3 502 1 372 356 153 13 chr5 38177204 38177440 -161452710 - L2 LINE L2 -11 3261 2993 744 319 79 22 chr5 38177579 38177986 -161452164 - L2 LINE L2 -2368 946 517 388 222 28 67 chr5 38178376 38178556 -161451594 - L1ME4a LINE L1 -14 6107 5935 226 208 0 0 chr5 38178545 38178598 -161451552 - L1MC4 LINE L1 -1337 6705 6653 * 273 57 0 0 chr5 38178599 38178634 -161451516 + (CA)n Simple_repeat Simple_repeat 2 36 0 1951 111 0 0 chr5 38178646 38178899 -161451251 - AluSx SINE Alu -26 286 34 1754 168 7 0 chr5 38179444 38179724 -161450426 - AluJb SINE Alu -26 286 5 447 247 96 14 chr5 38183042 38183261 -161446889 - L1MC4 LINE L1 -1916 5892 5656 2390 117 54 20 chr5 38183993 38184344 -161445806 - THE1B LTR MaLR -1 363 1 1795 184 113 76 chr5 38184466 38184951 -161445199 + MLT1D LTR MaLR 3 505 0 253 307 136 34 chr5 38185035 38185123 -161445027 - L2 LINE L2 -32 3240 3144 776 286 78 37 chr5 38185199 38185521 -161444629 + L2 LINE L2 2804 3138 -175 2303 107 10 0 chr5 38185528 38185836 -161444314 - AluSq SINE Alu -2 311 1 497 313 16 0 chr5 38185859 38185987 -161444163 + MER91A DNA MER1_type 49 178 -18 458 318 12 18 chr5 38186021 38186191 -161443959 + L2 LINE L2 3145 3313 0 2223 104 7 3 chr5 38186692 38186989 -161443161 + AluSx SINE Alu 1 298 -14 2112 81 56 0 chr5 38189346 38189631 -161440519 - AluSx SINE Alu -8 304 4 1354 114 30 5 chr5 38190282 38190507 -161439643 + AluSg/x SINE Alu 77 306 0 22 35 0 0 chr5 38190611 38190640 -161439510 + AT_rich Low_complexity Low_complexity 1 29 0 878 237 76 0 chr5 38190740 38190951 -161439199 - MIR SINE MIR -8 254 28 1985 151 10 0 chr5 38190952 38191256 -161438894 - AluJb SINE Alu -3 309 3 1257 183 28 0 chr5 38191287 38191500 -161438650 - MER20 DNA MER1_type 0 219 1 1305 167 139 0 chr5 38191508 38191789 -161438361 - MER33 DNA MER1_type 0 324 5 2332 178 23 16 chr5 38191860 38192288 -161437862 - LTR3 LTR ERVK 0 432 2 1623 138 73 4 chr5 38192288 38192549 -161437601 - AluSx SINE Alu -33 279 1 303 154 39 0 chr5 38193119 38193171 -161436979 - MER66A LTR ERV1 -141 337 284 198 231 154 77 chr5 38193258 38193401 -161436749 - L2 LINE L2 0 3313 3160 246 265 48 24 chr5 38193500 38193583 -161436567 - L2 LINE L2 -220 3052 2968 313 142 52 0 chr5 38193839 38193911 -161436239 - LTR12 LTR ERV1 -294 2144 352 196 325 38 12 chr5 38194450 38194530 -161435620 - MIR3 SINE MIR -15 193 112 467 286 170 6 chr5 38194542 38194713 -161435437 - MIR SINE MIR -2 260 62 1444 197 48 7 chr5 38195356 38195645 -161434505 + AluJb SINE Alu 1 301 -11 2380 83 0 7 chr5 38195719 38196019 -161434131 + AluSx SINE Alu 1 298 -14 450 187 0 0 chr5 38196019 38196110 -161434040 + (TA)n Simple_repeat Simple_repeat 1 91 0 420 20 0 0 chr5 38196101 38196150 -161434000 + (TG)n Simple_repeat Simple_repeat 2 50 0 * 483 135 0 0 chr5 38196851 38196925 -161433225 + L1MA10 LINE L1 6254 6327 -7 263 321 71 65 chr5 38197473 38197641 -161432509 - MIR SINE MIR -79 183 15 1004 274 87 27 chr5 38197818 38198380 -161431770 - L2 LINE L2 -4 3309 2698 1676 230 40 44 chr5 38198384 38198980 -161431170 + L1MC5 LINE L1 6923 7516 -445 504 218 125 36 chr5 38199039 38199287 -161430863 + L1MC5 LINE L1 7644 7913 -48 533 290 59 21 chr5 38199298 38199536 -161430614 - L2 LINE L2 -611 2703 2457 405 213 197 16 chr5 38199932 38200059 -161430091 - MIR SINE MIR 0 262 113 273 325 147 45 chr5 38201216 38201481 -161428669 - L2 LINE L2 0 3272 2981 915 154 0 0 chr5 38201498 38201628 -161428522 - FLAM_C SINE Alu -3 130 1 2611 124 8 3 chr5 38202185 38202547 -161427603 - THE1B LTR MaLR 0 364 1 2141 108 4 0 chr5 38202692 38202970 -161427180 + AluSx SINE Alu 1 279 -33 441 0 0 0 chr5 38204847 38204896 -161425254 + (CA)n Simple_repeat Simple_repeat 2 50 0 2277 106 0 13 chr5 38205515 38205827 -161424323 + AluSc SINE Alu 1 308 -1 2217 93 14 0 chr5 38206445 38206734 -161423416 - AluSx SINE Alu -15 297 5 1988 101 49 3 chr5 38207567 38207853 -161422297 - AluSq SINE Alu -14 299 1 544 237 34 8 chr5 38208162 38208280 -161421870 + L2 LINE L2 3188 3308 -5 369 0 0 0 chr5 38208418 38208459 -161421691 + (CA)n Simple_repeat Simple_repeat 2 42 0 1865 151 16 16 chr5 38208556 38208868 -161421282 + AluJb SINE Alu 1 312 0 6030 162 46 18 chr5 38209322 38210317 -161419833 + L1 LINE L1 3239 4274 -1872 306 50 0 0 chr5 38210317 38210357 -161419793 + (CA)n Simple_repeat Simple_repeat 1 40 0 6030 162 46 18 chr5 38210357 38210557 -161419593 + L1 LINE L1 4274 4467 -1679 1084 231 61 95 chr5 38210964 38211257 -161418893 + L1MC4 LINE L1 7537 7806 -236 1450 189 63 14 chr5 38211257 38211380 -161418770 + AluJb SINE Alu 1 116 -196 189 0 0 0 chr5 38211380 38211401 -161418749 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1450 189 63 14 chr5 38211401 38211562 -161418588 + AluJb SINE Alu 116 299 -13 1084 231 61 95 chr5 38211562 38211792 -161418358 + L1MC4 LINE L1 7806 8042 0 631 290 11 11 chr5 38211805 38211988 -161418162 + MIR SINE MIR 20 202 -60 180 0 0 0 chr5 38212162 38212182 -161417968 + (A)n Simple_repeat Simple_repeat 1 20 0 222 118 0 0 chr5 38212408 38212442 -161417708 + (TATG)n Simple_repeat Simple_repeat 2 35 0 337 374 8 0 chr5 38213337 38213460 -161416690 + MER5A DNA MER1_type 63 186 -3 1480 162 4 4 chr5 38213768 38214003 -161416147 + MLT1A1 LTR MaLR 12 246 -119 219 337 63 44 chr5 38215530 38215627 -161414523 - MIR SINE MIR -2 260 166 2164 80 0 0 chr5 38215627 38215901 -161414249 - AluSc SINE Alu -1 308 35 219 337 63 44 chr5 38215901 38215961 -161414189 - MIR SINE MIR -96 166 109 2201 122 10 0 chr5 38215961 38216264 -161413886 + AluJb SINE Alu 1 306 -6 219 337 63 44 chr5 38216264 38216357 -161413793 - MIR SINE MIR -153 109 4 308 325 88 9 chr5 38216424 38216538 -161413612 - MIR SINE MIR -118 144 22 543 228 69 73 chr5 38216560 38216579 -161413571 + MIR SINE MIR 22 40 -222 593 219 50 8 chr5 38216579 38216698 -161413452 - FLAM_A SINE Alu -8 125 2 543 228 69 73 chr5 38216698 38216911 -161413239 + MIR SINE MIR 40 253 -9 721 274 51 8 chr5 38217032 38217266 -161412884 + MIR SINE MIR 12 255 -7 822 339 78 42 chr5 38218480 38219226 -161410924 - L2 LINE L2 -263 3009 2243 191 254 16 16 chr5 38219442 38219505 -161410645 + MIR SINE MIR 199 261 -1 326 283 88 103 chr5 38219654 38220248 -161409902 + L1MC4a LINE L1 5326 5910 -1898 964 175 88 28 chr5 38220442 38220659 -161409491 + MIR SINE MIR 12 241 -21 423 141 0 0 chr5 38220666 38220744 -161409406 + (ATG)n Simple_repeat Simple_repeat 2 79 0 394 229 0 76 chr5 38220862 38220967 -161409183 - L3 LINE CR1 -100 1477 1381 738 260 85 30 chr5 38220972 38221207 -161408943 + MIR SINE MIR 12 259 -3 248 240 190 20 chr5 38222206 38222306 -161407844 + MIR SINE MIR 19 135 -73 701 316 76 40 chr5 38222308 38222678 -161407472 - L2 LINE L2 0 3272 2890 334 191 0 0 chr5 38222832 38222895 -161407255 + MER103 DNA DNA 33 95 -71 1998 123 17 3 chr5 38222901 38223201 -161406949 + AluSx SINE Alu 1 304 -8 882 122 0 36 chr5 38223281 38223420 -161406730 - AluJo SINE Alu -178 134 1 800 195 130 35 chr5 38223742 38223973 -161406177 + MIR SINE MIR 10 262 0 1999 117 7 11 chr5 38225405 38225717 -161404433 + AluSc SINE Alu 1 311 0 1504 149 4 8 chr5 38225908 38226149 -161404001 - Tigger2 DNA MER2_type 0 2718 2479 934 166 11 11 chr5 38226150 38226325 -161403825 + AluJb SINE Alu 137 311 -1 4310 147 48 8 chr5 38226396 38227112 -161403038 - Tigger2 DNA MER2_type -1974 744 1 208 268 197 39 chr5 38227247 38227277 -161402873 - MIR3 SINE MIR -58 150 126 2408 96 3 0 chr5 38227277 38227589 -161402561 + AluSp SINE Alu 1 313 0 208 268 197 39 chr5 38227589 38227685 -161402465 - MIR3 SINE MIR -82 126 4 1969 116 32 3 chr5 38227938 38228222 -161401928 + AluSq SINE Alu 1 292 -21 2098 116 16 3 chr5 38229120 38229423 -161400727 - L1MC1 LINE L1 -18 6315 6009 1699 151 30 39 chr5 38229761 38230066 -161400084 - AluJo SINE Alu -10 302 1 2330 102 0 0 chr5 38230114 38230409 -161399741 + AluSc SINE Alu 1 295 -14 2264 103 0 13 chr5 38231747 38232057 -161398093 - AluSx SINE Alu -6 306 1 1940 172 0 0 chr5 38232157 38232459 -161397691 + AluJo SINE Alu 1 302 -10 191 291 152 0 chr5 38232544 38232623 -161397527 - L2 LINE L2 -2 3311 3221 276 254 40 79 chr5 38233090 38233216 -161396934 + MER20 DNA MER1_type 80 200 -19 22 0 0 0 chr5 38233324 38233346 -161396804 + AT_rich Low_complexity Low_complexity 1 22 0 526 160 319 14 chr5 38233706 38233850 -161396300 - MER5A DNA MER1_type 0 189 2 2359 77 24 3 chr5 38233973 38234270 -161395880 - AluSp SINE Alu -10 303 1 302 324 199 12 chr5 38235735 38236062 -161394088 + L2 LINE L2 2061 2448 -866 2270 119 0 0 chr5 38236220 38236523 -161393627 - AluSx SINE Alu -3 309 7 236 320 0 13 chr5 38236882 38236957 -161393193 + L2 LINE L2 3238 3311 -2 245 383 62 8 chr5 38237116 38237244 -161392906 + MIR3 SINE MIR 38 172 -36 24 0 0 0 chr5 38238481 38238505 -161391645 + AT_rich Low_complexity Low_complexity 1 24 0 2166 104 0 7 chr5 38238521 38238809 -161391341 + AluSq SINE Alu 3 288 -25 281 269 64 39 chr5 38238874 38238952 -161391198 + MIR SINE MIR 24 103 -105 623 172 0 78 chr5 38239695 38239823 -161390327 - FLAM_A SINE Alu -11 122 5 787 258 60 20 chr5 38240007 38240259 -161389891 + MIR SINE MIR 1 262 0 22 35 0 0 chr5 38240353 38240382 -161389768 + AT_rich Low_complexity Low_complexity 1 29 0 241 269 115 46 chr5 38240835 38240965 -161389185 + MIR SINE MIR 14 152 -110 250 357 24 12 chr5 38242464 38242548 -161387602 + L2 LINE L2 3170 3254 -18 2271 81 0 26 chr5 38243157 38243464 -161386686 + AluSg SINE Alu 1 299 -11 1368 158 68 43 chr5 38243835 38244114 -161386036 + AluJo SINE Alu 1 286 -26 1875 117 3 81 chr5 38244774 38245108 -161385042 + AluJb SINE Alu 1 308 -4 330 113 0 70 chr5 38245193 38245264 -161384886 - L1PA16 LINE L1 0 6166 6101 232 304 112 16 chr5 38245866 38245991 -161384159 + L2 LINE L2 3158 3294 -19 394 276 233 55 chr5 38246278 38246626 -161383524 - L2 LINE L2 -13 3300 2891 1483 167 99 8 chr5 38246687 38246950 -161383200 - AluSx SINE Alu -25 287 1 1974 121 3 16 chr5 38247433 38247746 -161382404 + AluSp SINE Alu 1 309 -4 2125 105 6 19 chr5 38249082 38249397 -161380753 - AluSq SINE Alu -2 311 1 569 218 24 8 chr5 38249400 38249524 -161380626 - FLAM_A SINE Alu -6 127 2 2406 81 7 0 chr5 38251845 38252153 -161377997 - AluSp SINE Alu -3 310 1 1814 139 21 3 chr5 38253577 38253865 -161376285 - AluJo SINE Alu -19 293 1 271 313 48 62 chr5 38254819 38254965 -161375185 + MIR SINE MIR 8 149 -59 374 275 105 91 chr5 38255110 38255615 -161374535 + L1M2 LINE L1 896 1407 -5442 2401 74 0 7 chr5 38257958 38258256 -161371894 + AluSc SINE Alu 1 296 -13 959 212 132 99 chr5 38258305 38258829 -161371321 - MLT1F LTR MaLR 0 542 2 211 53 26 26 chr5 38259085 38259123 -161371027 + (TTTTA)n Simple_repeat Simple_repeat 1 38 0 1773 134 0 27 chr5 38259136 38259398 -161370752 - AluSx SINE Alu -57 255 1 2097 141 0 7 chr5 38260044 38260350 -161369800 - AluSx SINE Alu -8 304 1 425 351 48 19 chr5 38260906 38261114 -161369036 + MIR SINE MIR 2 215 -47 1685 164 45 3 chr5 38262142 38262428 -161367722 - AluJo SINE Alu -14 298 1 2294 114 0 0 chr5 38262559 38262865 -161367285 - AluSq SINE Alu -2 311 6 1979 122 11 11 chr5 38263630 38263917 -161366233 - AluSx SINE Alu -25 287 1 567 252 224 14 chr5 38264008 38264222 -161365928 - MIR SINE MIR -2 260 2 24 0 0 0 chr5 38264830 38264854 -161365296 + AT_rich Low_complexity Low_complexity 1 24 0 337 198 99 0 chr5 38264855 38264956 -161365194 - Charlie8 DNA MER1_type -2262 155 45 2763 13 0 0 chr5 38265081 38265384 -161364766 - AluYb8 SINE Alu -15 303 1 198 0 0 0 chr5 38267019 38267041 -161363109 + (TTTAA)n Simple_repeat Simple_repeat 3 24 0 1453 193 0 82 chr5 38267041 38267347 -161362803 - AluJb SINE Alu -29 283 3 2396 106 0 0 chr5 38267382 38267693 -161362457 - AluSx SINE Alu -1 311 1 1665 250 113 66 chr5 38268392 38268615 -161361535 - L1MC4 LINE L1 0 8042 7831 2458 77 3 0 chr5 38268615 38268912 -161361238 + AluSp SINE Alu 2 299 -14 1665 250 113 66 chr5 38268912 38269803 -161360347 - L1MC4 LINE L1 -211 7831 6876 2102 134 0 0 chr5 38270915 38271205 -161358945 - AluSx SINE Alu -22 290 1 880 244 105 54 chr5 38273244 38273867 -161356283 - L1M4 LINE L1 -970 5176 4522 2524 246 107 36 chr5 38273883 38274412 -161355738 + L1MC4 LINE L1 6448 6938 -1104 2298 90 7 0 chr5 38274412 38274702 -161355448 + AluSg SINE Alu 1 292 -18 2524 246 107 36 chr5 38274702 38275489 -161354661 + L1MC4 LINE L1 6938 7949 -93 204 293 0 0 chr5 38276274 38276332 -161353818 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 260 262 144 10 chr5 38277114 38277215 -161352935 - MIR SINE MIR -61 147 39 2075 114 10 3 chr5 38277353 38277651 -161352499 - AluSg SINE Alu -10 300 1 259 271 125 21 chr5 38277719 38277815 -161352335 - MIR3 SINE MIR -48 160 55 279 0 0 0 chr5 38277951 38277982 -161352168 + (TG)n Simple_repeat Simple_repeat 2 32 0 2269 100 0 3 chr5 38278700 38278990 -161351160 + AluSg SINE Alu 1 289 -21 1898 149 10 7 chr5 38279097 38279393 -161350757 - AluSx SINE Alu -14 298 2 24 0 0 0 chr5 38281009 38281033 -161349117 + AT_rich Low_complexity Low_complexity 1 24 0 2829 10 0 0 chr5 38281603 38281911 -161348239 + AluYa5 SINE Alu 1 308 -3 269 339 72 33 chr5 38283779 38283959 -161346191 - MIR3 SINE MIR -6 202 16 477 267 54 70 chr5 38283966 38284224 -161345926 + L1ME3A LINE L1 4644 4897 -1249 317 266 161 12 chr5 38284253 38284501 -161345649 + L1ME3A LINE L1 4993 5277 -869 1241 133 258 24 chr5 38284554 38284891 -161345259 - Charlie1 DNA MER1_type 0 2761 2346 324 164 60 0 chr5 38284889 38284956 -161345194 - Charlie1 DNA MER1_type -2690 71 1 * 265 273 188 0 chr5 38285074 38285239 -161344911 + L1ME3A LINE L1 5461 5656 -506 345 252 107 0 chr5 38285245 38285348 -161344802 + MER5A DNA MER1_type 7 120 -69 419 259 97 16 chr5 38285395 38285641 -161344509 + L1ME3A LINE L1 5653 5925 -237 22 0 0 0 chr5 38285773 38285795 -161344355 + AT_rich Low_complexity Low_complexity 1 22 0 772 251 236 10 chr5 38286001 38286416 -161343734 + MLT1J LTR MaLR 3 511 0 362 292 167 12 chr5 38286504 38286672 -161343478 + MIR SINE MIR 54 247 -15 1731 135 53 11 chr5 38286804 38287086 -161343064 - AluSx SINE Alu -18 294 1 301 304 65 14 chr5 38287508 38287646 -161342504 + L3 LINE CR1 1355 1499 -78 1955 141 10 20 chr5 38287745 38288050 -161342100 - AluSx SINE Alu -10 302 1 8244 195 35 64 chr5 38288050 38288346 -161341804 - L1 LINE L1 -3104 3744 3441 7397 135 25 18 chr5 38288346 38288428 -161341722 - HSMAR2 DNA Mariner -2 1300 1220 1946 119 32 0 chr5 38288428 38288713 -161341437 + AluSx SINE Alu 1 294 -18 7397 135 25 18 chr5 38288713 38289921 -161340229 - HSMAR2 DNA Mariner -82 1220 1 8244 195 35 64 chr5 38289921 38290068 -161340082 - L1 LINE L1 -3407 3441 3291 1842 183 10 0 chr5 38290068 38290374 -161339776 - AluJo SINE Alu -3 309 1 8244 195 35 64 chr5 38290374 38290703 -161339447 - L1 LINE L1 -3557 3291 2954 1785 199 0 0 chr5 38290703 38291000 -161339150 - AluJo SINE Alu -15 297 1 8244 195 35 64 chr5 38291000 38291140 -161339010 - L1 LINE L1 -3894 2954 2811 219 69 0 0 chr5 38291140 38291169 -161338981 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 1980 155 0 0 chr5 38291169 38291460 -161338690 - AluSx SINE Alu -21 291 1 8244 195 35 64 chr5 38291460 38293195 -161336955 - L1 LINE L1 -4036 2812 1187 3909 128 12 94 chr5 38293195 38293756 -161336394 + LTR8 LTR ERV1 1 486 -205 2458 73 0 10 chr5 38293756 38294069 -161336081 + AluY SINE Alu 2 311 0 3909 128 12 94 chr5 38294069 38294260 -161335890 + LTR8 LTR ERV1 486 691 0 8244 195 35 64 chr5 38294260 38294584 -161335566 - L1 LINE L1 -5661 1187 855 410 230 23 0 chr5 38295030 38295117 -161335033 - MER115 DNA AcHobo -447 246 158 2325 201 29 10 chr5 38295188 38295705 -161334445 - MER34 LTR ERV1 -4 538 12 216 158 0 0 chr5 38296481 38296519 -161333631 + GA-rich Low_complexity Low_complexity 2 39 0 281 287 70 23 chr5 38296638 38296767 -161333383 - MLT1L LTR MaLR -434 181 47 584 223 27 80 chr5 38297233 38297342 -161332808 + MER45A DNA AcHobo 1 97 -1484 4468 36 0 0 chr5 38297342 38297874 -161332276 - L1PA5 LINE L1 -2 6152 5621 584 223 27 80 chr5 38297874 38297952 -161332198 + MER45A DNA AcHobo 97 178 0 2767 64 0 43 chr5 38298089 38298280 -161331870 - L1PB1 LINE L1 0 6151 5984 2245 123 0 0 chr5 38298280 38298581 -161331569 - AluSx SINE Alu -11 301 1 2767 64 0 43 chr5 38298581 38298782 -161331368 - L1PB1 LINE L1 -167 5984 5776 21 0 0 0 chr5 38299220 38299241 -161330909 + AT_rich Low_complexity Low_complexity 1 21 0 369 332 123 23 chr5 38299262 38299482 -161330668 - L2 LINE L2 0 3272 3031 415 104 0 0 chr5 38299571 38299638 -161330512 - AluSp/q SINE Alu -7 306 240 864 258 188 12 chr5 38299823 38300307 -161329843 + L1MC4a LINE L1 5598 6166 -1642 1403 113 16 61 chr5 38300522 38300769 -161329381 + MER46A DNA MER2_type 1 236 0 529 302 86 33 chr5 38301970 38302215 -161327935 - MIR SINE MIR 0 262 5 330 206 82 10 chr5 38302992 38303089 -161327061 - Charlie7 DNA MER1_type -2504 108 5 944 196 186 53 chr5 38303757 38304079 -161326071 + MLT1A1 LTR MaLR 1 365 0 2520 70 0 13 chr5 38304121 38304460 -161325690 - AluY SINE Alu 0 337 3 337 308 99 29 chr5 38304756 38304928 -161325222 + MER5A DNA MER1_type 4 187 -2 2233 101 7 0 chr5 38305294 38305581 -161324569 - AluSc SINE Alu -20 289 1 487 266 6 57 chr5 38306936 38307094 -161323056 - MER5A DNA MER1_type -22 167 18 198 0 0 0 chr5 38307685 38307707 -161322443 + (TGG)n Simple_repeat Simple_repeat 2 23 0 646 234 63 0 chr5 38307749 38307907 -161322243 - MER5B DNA MER1_type -10 168 1 486 251 64 61 chr5 38309019 38309199 -161320951 - MIR SINE MIR -48 214 31 186 313 31 0 chr5 38309858 38309922 -161320228 - L2 LINE L2 -1 3312 3247 338 241 13 13 chr5 38309937 38310016 -161320134 - MIR SINE MIR -28 234 156 619 212 130 7 chr5 38310016 38310162 -161319988 - FRAM SINE Alu -13 163 1 238 281 73 10 chr5 38310467 38310563 -161319587 - L1ME4a LINE L1 -30 6091 5990 283 267 96 14 chr5 38310603 38310749 -161319401 - L1ME4a LINE L1 -205 5916 5759 739 246 31 36 chr5 38312358 38312553 -161317597 - MIR SINE MIR -61 201 8 429 239 0 72 chr5 38312730 38312868 -161317282 - MIR SINE MIR -1 261 134 622 231 82 14 chr5 38312959 38313169 -161316981 - MIR SINE MIR -1 261 32 28 71 0 0 chr5 38314428 38314484 -161315666 + AT_rich Low_complexity Low_complexity 1 56 0 4012 206 83 66 chr5 38314727 38316286 -161313864 + L1MC/D LINE L1 3444 5028 -1118 1300 200 4 39 chr5 38316350 38316605 -161313545 + AluJo SINE Alu 43 288 -24 27 0 0 0 chr5 38316837 38316864 -161313286 + AT_rich Low_complexity Low_complexity 1 27 0 329 252 122 23 chr5 38316949 38317080 -161313070 + L1MC/D LINE L1 5673 5816 -1992 2352 104 0 0 chr5 38317092 38317399 -161312751 + AluSx SINE Alu 1 307 -5 228 242 33 22 chr5 38318143 38318234 -161311916 + L1M4 LINE L1 784 875 -5667 979 174 101 9 chr5 38318298 38318516 -161311634 + L1MCa LINE L1 19 256 -6170 695 156 78 0 chr5 38318518 38318685 -161311465 + L1MCa LINE L1 1800 1979 -4447 7486 196 55 72 chr5 38318687 38318888 -161311262 + L1MCa LINE L1 2092 2295 -4131 960 206 0 0 chr5 38318888 38319053 -161311097 + FRAM SINE Alu 1 165 -1 7486 196 55 72 chr5 38319053 38319585 -161310565 + L1MCa LINE L1 2295 2834 -3592 3127 79 56 7 chr5 38319585 38320017 -161310133 - MLT2A2 LTR ERVL 0 453 1 7486 196 55 72 chr5 38320017 38321100 -161309050 + L1MCa LINE L1 2834 3933 -2493 1551 72 5 0 chr5 38321100 38321307 -161308843 + L1PA7 LINE L1 5943 6150 -4 7486 196 55 72 chr5 38321307 38321720 -161308430 + L1MCa LINE L1 3933 4351 -2075 2418 109 0 0 chr5 38321720 38322033 -161308117 - AluSq SINE Alu 0 313 1 7486 196 55 72 chr5 38322033 38322529 -161307621 + L1MCa LINE L1 4351 4764 -1662 758 189 8 0 chr5 38322529 38322656 -161307494 + FLAM_A SINE Alu 1 128 -5 7486 196 55 72 chr5 38322656 38322942 -161307208 + L1MCa LINE L1 4764 5053 -1373 3685 152 33 9 chr5 38322942 38323631 -161306519 + L1PB4 LINE L1 5437 6142 -14 2241 66 0 24 chr5 38324026 38324315 -161305835 + AluSc SINE Alu 1 282 -27 1377 158 68 43 chr5 38324706 38324985 -161305165 + AluJo SINE Alu 1 286 -26 2198 102 14 0 chr5 38325645 38325938 -161304212 + AluSx SINE Alu 1 297 -15 566 122 22 0 chr5 38326745 38326835 -161303315 - AluS SINE Alu -221 92 1 3853 182 23 47 chr5 38326843 38326932 -161303218 - L1MB8 LINE L1 -9 6169 6079 2064 119 3 14 chr5 38326932 38327225 -161302925 + AluSx SINE Alu 1 290 -22 3853 182 23 47 chr5 38327225 38328198 -161301952 - L1MB8 LINE L1 -99 6079 5136 252 365 116 19 chr5 38328244 38328848 -161301302 - L2 LINE L2 -337 2977 2304 1070 232 157 11 chr5 38328850 38329220 -161300930 - LTR16A LTR ERVL 0 450 27 199 316 13 82 chr5 38329253 38329411 -161300739 - L2 LINE L2 -1015 2299 2153 670 273 57 13 chr5 38329428 38329655 -161300495 - MLT1L LTR MaLR -11 604 368 2013 209 85 86 chr5 38329745 38330521 -161299629 - MER21B LTR ERV1 -69 794 20 475 196 0 22 chr5 38330544 38330636 -161299514 - MER21B LTR ERV1 -773 90 1 333 211 193 25 chr5 38330760 38330921 -161299229 - MLT1L LTR MaLR -427 188 1 332 317 56 60 chr5 38330946 38331230 -161298920 - L2 LINE L2 -1230 2084 1802 802 225 25 21 chr5 38331291 38331527 -161298623 + L1ME1 LINE L1 5930 6166 0 2185 123 3 3 chr5 38331834 38332134 -161298016 - AluSx SINE Alu -12 300 1 3553 129 7 0 chr5 38332346 38332921 -161297229 + L1MA4 LINE L1 5442 6020 -280 3253 160 33 0 chr5 38333016 38333555 -161296595 + MER41D LTR ERV1 1 557 0 1586 88 23 0 chr5 38333910 38334125 -161296025 + L1PA16 LINE L1 5935 6154 -12 1545 78 0 0 chr5 38334127 38334339 -161295811 - AluY SINE Alu 0 306 95 8362 65 3 7 chr5 38334339 38335414 -161294736 - MER11C LTR ERVK -1 1070 1 737 129 0 0 chr5 38335414 38335515 -161294635 - AluY SINE Alu -210 101 1 187 269 65 54 chr5 38335593 38335686 -161294464 - L2 LINE L2 -17 3296 3203 1373 81 24 89 chr5 38335967 38336213 -161293937 - MER30 DNA MER1_type 0 230 1 268 241 19 0 chr5 38336217 38336271 -161293879 - MIR3 SINE MIR -48 160 106 30 0 0 0 chr5 38336522 38336552 -161293598 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 38336651 38336674 -161293476 + AT_rich Low_complexity Low_complexity 1 23 0 4364 161 36 35 chr5 38336678 38336989 -161293161 - L1MB4 LINE L1 -29 6151 5842 2765 16 0 6 chr5 38336989 38337300 -161292850 - AluYb8 SINE Alu -9 309 1 4364 161 36 35 chr5 38337300 38337916 -161292234 - L1MB4 LINE L1 -338 5842 5229 2069 123 7 3 chr5 38337916 38338209 -161291941 - AluSp SINE Alu -19 294 1 4364 161 36 35 chr5 38338209 38338732 -161291418 - L1MB4 LINE L1 -951 5229 4708 652 309 56 48 chr5 38339629 38339915 -161290235 - L2 LINE L2 -980 2334 2041 2968 173 117 12 chr5 38339915 38340573 -161289577 - LTR8A LTR ERV1 0 727 1 652 309 56 48 chr5 38340573 38340749 -161289401 - L2 LINE L2 -1273 2041 1868 2059 138 3 0 chr5 38340960 38341251 -161288899 + AluSx SINE Alu 1 292 -20 1007 155 57 5 chr5 38341855 38342047 -161288103 + Tigger3b DNA MER2_type 1 202 -1029 4626 110 31 32 chr5 38342047 38342703 -161287447 + MER4E LTR ERV1 1 657 -122 4007 108 1 66 chr5 38342703 38343261 -161286889 + MER41B LTR ERV1 1 509 -126 2190 120 3 10 chr5 38343261 38343570 -161286580 - AluSx SINE Alu -5 307 1 4007 108 1 66 chr5 38343570 38343690 -161286460 + MER41B LTR ERV1 509 635 0 4626 110 31 32 chr5 38343690 38343813 -161286337 + MER4E LTR ERV1 657 779 0 4325 113 42 47 chr5 38343813 38344661 -161285489 + Tigger3b DNA MER2_type 199 1041 -190 2805 116 45 4 chr5 38344661 38345128 -161285022 + LTR19A LTR ERV1 1 486 0 1101 179 0 0 chr5 38345128 38345302 -161284848 + Tigger3b DNA MER2_type 1037 1210 -22 245 231 21 54 chr5 38346378 38346564 -161283586 + (TTA)n Simple_repeat Simple_repeat 1 180 0 2022 119 31 7 chr5 38346612 38346906 -161283244 + AluSx SINE Alu 1 301 -11 408 293 200 46 chr5 38347982 38348965 -161281185 - L2 LINE L2 -455 2859 1725 386 309 40 63 chr5 38348975 38349199 -161280951 - MIR3 SINE MIR -36 226 9 186 360 30 10 chr5 38349270 38349370 -161280780 - L2 LINE L2 -528 2786 2685 336 198 69 60 chr5 38349469 38349585 -161280565 - MER113 DNA MER1_type? -83 438 322 486 71 200 0 chr5 38349597 38349667 -161280483 - AluSg/x SINE Alu -20 292 209 1423 110 0 0 chr5 38349966 38350148 -161280002 - AluSx SINE Alu -129 183 2 897 236 86 30 chr5 38350157 38350365 -161279785 - MER113 DNA MER1_type? -198 323 91 2442 71 0 16 chr5 38350365 38350675 -161279475 + AluY SINE Alu 1 305 -6 897 236 86 30 chr5 38350675 38350767 -161279383 - MER113 DNA MER1_type? -430 91 6 637 292 66 25 chr5 38350929 38351398 -161278752 - MLT1L LTR MaLR -8 607 97 293 330 186 35 chr5 38351822 38353237 -161276913 + L2 LINE L2 462 2144 -1170 2149 106 3 3 chr5 38353237 38353554 -161276596 - AluSx SINE Alu 0 317 1 293 330 186 35 chr5 38353554 38353722 -161276428 + L2 LINE L2 2144 2285 -1029 2181 126 12 0 chr5 38353741 38354066 -161276084 + MER47A DNA MER2_type 38 366 0 894 222 141 0 chr5 38354324 38354522 -161275628 + MIR SINE MIR 21 246 -16 212 387 120 20 chr5 38354731 38354821 -161275329 + L2 LINE L2 3102 3182 -90 558 113 0 0 chr5 38354821 38354901 -161275249 - MADE1 DNA Mariner 0 80 1 212 387 120 20 chr5 38354901 38354960 -161275190 + L2 LINE L2 3182 3266 -6 1485 192 105 19 chr5 38355328 38355651 -161274499 + MLT1A1 LTR MaLR 1 351 -14 445 305 23 15 chr5 38357465 38357596 -161272554 + MER5B DNA MER1_type 15 146 -32 2131 103 14 0 chr5 38358091 38358398 -161271752 - AluSx SINE Alu 0 311 1 22 35 0 0 chr5 38358729 38358758 -161271392 + AT_rich Low_complexity Low_complexity 1 29 0 811 263 144 41 chr5 38358809 38359172 -161270978 - L1MC4a LINE L1 -95 6026 5603 2517 121 100 5 chr5 38359172 38359561 -161270589 - MSTB LTR MaLR 0 426 1 811 263 144 41 chr5 38359561 38359661 -161270489 - L1MC4a LINE L1 -518 5603 5515 2185 175 3 14 chr5 38359876 38360231 -161269919 + MLT1A1 LTR MaLR 11 361 -4 244 267 0 0 chr5 38360500 38360545 -161269605 - MIR SINE MIR -195 67 23 2501 145 25 37 chr5 38360609 38361044 -161269106 + MSTB1 LTR MaLR 1 430 -2 1938 151 0 3 chr5 38362187 38362472 -161267678 + AluSx SINE Alu 1 284 -28 2166 104 0 23 chr5 38363271 38363578 -161266572 + AluSg SINE Alu 1 300 -10 2158 128 0 0 chr5 38364065 38364354 -161265796 + AluSx SINE Alu 15 303 -9 27 0 0 0 chr5 38364465 38364492 -161265658 + AT_rich Low_complexity Low_complexity 1 27 0 2223 91 19 3 chr5 38364535 38364789 -161265361 + L1PB3 LINE L1 5534 5795 -359 378 0 0 0 chr5 38364789 38364831 -161265319 + (CA)n Simple_repeat Simple_repeat 2 43 0 2223 91 19 3 chr5 38364831 38364885 -161265265 + L1PB3 LINE L1 5795 5847 -307 1610 95 95 0 chr5 38364891 38365113 -161265037 + L1PB3 LINE L1 5912 6154 0 273 128 0 0 chr5 38365113 38365160 -161264990 + (TA)n Simple_repeat Simple_repeat 2 48 0 733 173 59 47 chr5 38366057 38366254 -161263896 + MLT1B LTR MaLR 1 185 -189 2222 96 14 3 chr5 38366383 38366676 -161263474 + AluSx SINE Alu 5 300 -12 2299 103 0 3 chr5 38367051 38367352 -161262798 + AluSg SINE Alu 5 304 -6 225 311 0 44 chr5 38367490 38367580 -161262570 + MIR SINE MIR 69 154 -108 655 320 112 3 chr5 38367911 38368214 -161261936 + L2 LINE L2 2935 3270 -2 186 176 0 0 chr5 38368305 38368356 -161261794 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 2392 101 0 0 chr5 38368443 38368749 -161261401 + AluSx SINE Alu 1 306 -6 2251 216 68 44 chr5 38369102 38369630 -161260520 + MER87 LTR ERV1 1 541 0 279 361 21 0 chr5 38370114 38370211 -161259939 + MIR SINE MIR 46 144 -118 1821 129 46 26 chr5 38370212 38370514 -161259636 + THE1B LTR MaLR 1 308 -56 35725 37 1 6 chr5 38370514 38375642 -161254508 + L1PA3 LINE L1 1053 6155 0 204 125 0 0 chr5 38375653 38375685 -161254465 + (A)n Simple_repeat Simple_repeat 1 32 0 231 114 0 0 chr5 38376071 38376106 -161254044 + (A)n Simple_repeat Simple_repeat 1 35 0 516 83 0 14 chr5 38376106 38376178 -161253972 + THE1B LTR MaLR 304 374 -1 324 253 0 13 chr5 38376205 38376284 -161253866 + MIR SINE MIR 166 243 -19 1914 153 3 0 chr5 38376767 38377098 -161253052 - AluSx SINE Alu 0 332 1 374 281 102 83 chr5 38377342 38377592 -161252558 - MARNA DNA Mariner -9 577 333 2236 100 3 7 chr5 38377592 38377901 -161252249 + AluSp SINE Alu 1 308 -5 374 281 102 83 chr5 38377901 38377999 -161252151 - MARNA DNA Mariner -253 333 238 2158 131 0 10 chr5 38377999 38378313 -161251837 + AluSx SINE Alu 1 311 -1 374 281 102 83 chr5 38378313 38378493 -161251657 - MARNA DNA Mariner -348 238 38 254 343 88 22 chr5 38379935 38380116 -161250034 + L2 LINE L2 3065 3257 -15 180 0 0 0 chr5 38380194 38380214 -161249936 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 599 293 112 53 chr5 38380263 38380717 -161249433 - L1MEd LINE L1 -5099 1020 540 364 304 133 59 chr5 38380865 38381204 -161248946 - L1MEd LINE L1 -5733 386 23 558 0 0 0 chr5 38381464 38381526 -161248624 + (GA)n Simple_repeat Simple_repeat 1 62 0 2481 83 0 0 chr5 38383131 38383444 -161246706 + AluSq SINE Alu 1 313 0 310 277 149 0 chr5 38383872 38383978 -161246172 - MIR SINE MIR -67 141 36 215 211 19 19 chr5 38384077 38384129 -161246021 + MIR SINE MIR 22 73 -135 892 154 11 75 chr5 38384800 38384849 -161245301 - FRAM SINE Alu -136 40 145 2199 130 3 0 chr5 38384849 38385157 -161244993 - AluSx SINE Alu -3 309 1 892 154 11 75 chr5 38385157 38385295 -161244855 - FRAM SINE Alu -30 146 1 440 248 51 36 chr5 38386733 38386870 -161243280 - MARNA DNA Mariner -28 558 420 235 327 40 0 chr5 38386960 38387061 -161243089 + MARNA DNA Mariner 284 388 -198 666 62 0 0 chr5 38387067 38387147 -161243003 + MADE1 DNA Mariner 1 80 0 2427 92 0 6 chr5 38388699 38389013 -161241137 + AluSx SINE Alu 1 312 0 240 150 0 0 chr5 38389236 38389276 -161240874 - MIR SINE MIR -40 222 183 475 353 27 5 chr5 38390068 38390255 -161239895 + L3 LINE CR1 1339 1529 -48 276 100 0 0 chr5 38390405 38390445 -161239705 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 1118 181 6 0 chr5 38390449 38390620 -161239530 - FAM SINE Alu -3 172 1 471 241 90 0 chr5 38390926 38391071 -161239079 + MER103 DNA DNA 8 165 -1 420 130 0 0 chr5 38392968 38393037 -161237113 + (GA)n Simple_repeat Simple_repeat 2 70 0 406 279 75 80 chr5 38394191 38394392 -161235758 - MIR3 SINE MIR -7 201 2 191 170 43 21 chr5 38394445 38394492 -161235658 - MIR3 SINE MIR 0 208 161 264 125 47 16 chr5 38395232 38395296 -161234854 + GA-rich Low_complexity Low_complexity 3 68 0 348 176 0 0 chr5 38395610 38395678 -161234472 + (TG)n Simple_repeat Simple_repeat 2 69 0 1031 201 0 0 chr5 38396437 38396601 -161233549 - AluJo/FRAM SINE Alu -2 300 137 1513 205 44 17 chr5 38396603 38396896 -161233254 - AluJb SINE Alu -1 301 1 236 232 127 146 chr5 38398210 38398477 -161231673 + L2 LINE L2 3052 3313 0 204 179 26 0 chr5 38398482 38398521 -161231629 + L2 LINE L2 3230 3269 -3 2522 71 0 0 chr5 38398662 38398971 -161231179 - AluY SINE Alu -2 309 1 412 303 46 17 chr5 38399370 38399545 -161230605 + MIR SINE MIR 29 208 -54 1760 187 3 16 chr5 38400061 38400366 -161229784 + AluJb SINE Alu 1 301 -11 570 230 118 29 chr5 38400366 38400570 -161229580 + MER20B DNA MER1_type 558 779 -4 305 159 16 0 chr5 38401029 38401092 -161229058 + GA-rich Low_complexity Low_complexity 2 65 0 264 308 0 28 chr5 38402639 38402746 -161227404 - L1ME LINE L1 -422 5699 5596 2392 64 30 0 chr5 38402805 38403103 -161227047 - AluSp SINE Alu -6 307 1 263 296 91 95 chr5 38406576 38406819 -161223331 + L2 LINE L2 3030 3271 -1 223 297 33 0 chr5 38406856 38406947 -161223203 + L3b LINE CR1 1374 1467 -116 25 83 0 0 chr5 38406960 38407020 -161223130 + AT_rich Low_complexity Low_complexity 1 60 0 358 252 141 0 chr5 38407117 38407252 -161222898 + L1ME LINE L1 5542 5695 -426 271 271 85 70 chr5 38409845 38409974 -161220176 + L2 LINE L2 3181 3311 -2 704 294 34 18 chr5 38410411 38410738 -161219412 + L1ME LINE L1 2173 2504 -3642 537 278 32 58 chr5 38410825 38411134 -161219016 + L1ME LINE L1 3715 4015 -2131 3254 144 46 34 chr5 38411146 38411737 -161218413 + MER39B LTR ERV1 56 653 0 613 300 64 11 chr5 38411753 38412033 -161218117 + L1ME LINE L1 4031 4325 -1821 1696 122 0 0 chr5 38412035 38412264 -161217886 + AluSx SINE Alu 1 229 -83 548 298 99 11 chr5 38412268 38412641 -161217509 + L1ME LINE L1 4411 4816 -1330 * 644 276 35 77 chr5 38412623 38413131 -161217019 + L1ME LINE L1 5318 5810 -352 1298 178 0 0 chr5 38418506 38418714 -161211436 - AluJb SINE Alu -20 292 85 327 288 42 34 chr5 38419177 38419295 -161210855 - MIR3 SINE MIR -32 176 58 195 114 0 0 chr5 38419766 38419801 -161210349 + (TA)n Simple_repeat Simple_repeat 1 35 0 491 235 209 0 chr5 38420903 38421056 -161209094 - MIR3 SINE MIR 0 208 24 302 261 150 0 chr5 38421651 38421773 -161208377 - MER5A DNA MER1_type 0 189 20 388 318 3 25 chr5 38425194 38425413 -161204737 + CT-rich Low_complexity Low_complexity 1 214 0 2613 50 0 0 chr5 38425426 38425727 -161204423 - AluY SINE Alu -10 301 1 449 206 103 73 chr5 38425745 38425910 -161204240 + MIR SINE MIR 29 198 -64 214 371 38 9 chr5 38426069 38426174 -161203976 + MIR SINE MIR 19 126 -82 386 250 74 9 chr5 38427918 38428026 -161202124 - MIR SINE MIR -128 134 20 217 271 51 76 chr5 38428152 38428270 -161201880 + MIR SINE MIR 81 195 -67 2110 100 11 0 chr5 38429226 38429506 -161200644 + AluSp SINE Alu 1 283 -30 328 300 43 26 chr5 38429972 38430205 -161199945 + L1MC5 LINE L1 7511 7747 -214 2002 153 6 6 chr5 38430255 38430568 -161199582 - AluSq SINE Alu 0 313 1 2148 110 0 10 chr5 38430568 38430867 -161199283 - AluSq SINE Alu -17 296 1 640 305 60 20 chr5 38432083 38432332 -161197818 - MIR SINE MIR 0 262 4 2518 150 17 0 chr5 38432432 38432845 -161197305 + L1MB5 LINE L1 5364 5783 -391 2165 125 0 3 chr5 38432847 38433142 -161197008 + AluSq SINE Alu 1 294 -19 727 244 83 20 chr5 38433151 38433173 -161196977 + L1MB5 LINE L1 5899 5918 -262 198 0 0 0 chr5 38433173 38433195 -161196955 + (TA)n Simple_repeat Simple_repeat 2 23 0 727 244 83 20 chr5 38433195 38433438 -161196712 + L1MB5 LINE L1 5918 6179 -1 41313 68 7 4 chr5 38433744 38439870 -161190280 + L1PA5 LINE L1 11 6152 -2 345 24 0 0 chr5 38440441 38440483 -161189667 + (CA)n Simple_repeat Simple_repeat 2 43 0 1136 178 0 49 chr5 38441064 38441289 -161188861 - MER20 DNA MER1_type -5 214 1 311 0 26 0 chr5 38441737 38441776 -161188374 + (CA)n Simple_repeat Simple_repeat 2 41 0 210 71 0 0 chr5 38442089 38442117 -161188033 + (TC)n Simple_repeat Simple_repeat 1 28 0 252 0 0 0 chr5 38442117 38442145 -161188005 + (TG)n Simple_repeat Simple_repeat 1 28 0 2324 116 0 0 chr5 38442176 38442486 -161187664 - AluSg SINE Alu 0 310 1 190 244 13 13 chr5 38442609 38442687 -161187463 + (TA)n Simple_repeat Simple_repeat 2 79 0 273 29 0 0 chr5 38445229 38445263 -161184887 + (TG)n Simple_repeat Simple_repeat 2 35 0 214 191 63 32 chr5 38445610 38445662 -161184488 + CT-rich Low_complexity Low_complexity 5 61 -8 2180 112 10 3 chr5 38445662 38445958 -161184192 - AluSg SINE Alu -12 298 1 324 0 0 0 chr5 38446091 38446127 -161184023 + (TG)n Simple_repeat Simple_repeat 1 36 0 298 360 14 0 chr5 38447426 38447573 -161182577 + (CA)n Simple_repeat Simple_repeat 2 150 0 386 231 68 17 chr5 38447860 38447977 -161182173 - MIR SINE MIR -109 153 31 23 33 0 0 chr5 38449030 38449060 -161181090 + AT_rich Low_complexity Low_complexity 1 30 0 234 0 0 0 chr5 38449251 38449277 -161180873 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2567 58 0 6 chr5 38449467 38449780 -161180370 - AluY SINE Alu 0 311 1 343 242 99 50 chr5 38450010 38450171 -161179979 - MIR SINE MIR 0 262 94 1287 237 25 69 chr5 38452357 38452390 -161177760 - L1ME3A LINE L1 -22 6148 6115 2284 130 12 6 chr5 38452390 38452736 -161177414 + MER7A DNA MER2_type 1 346 0 1287 237 25 69 chr5 38452736 38453149 -161177001 - L1ME3A LINE L1 -55 6115 5722 1942 155 0 3 chr5 38453493 38453796 -161176354 - AluJb SINE Alu -9 303 2 279 320 10 93 chr5 38455225 38455277 -161174873 - MER5B DNA MER1_type 0 178 123 2152 145 3 0 chr5 38455277 38455588 -161174562 - AluSx SINE Alu 0 312 1 279 320 10 93 chr5 38455588 38455729 -161174421 - MER5B DNA MER1_type -55 123 1 601 216 101 0 chr5 38455971 38456119 -161174031 - MIR SINE MIR -28 234 72 228 276 58 23 chr5 38456119 38456206 -161173944 - MIR SINE MIR -165 97 8 263 257 29 29 chr5 38456461 38456566 -161173584 + MER5A DNA MER1_type 81 185 -4 290 265 49 103 chr5 38456810 38457163 -161172987 + MLT1I LTR MaLR 98 549 0 398 203 8 94 chr5 38457466 38457594 -161172556 - MIR3 SINE MIR 0 208 92 7468 136 34 5 chr5 38457895 38458563 -161171587 + Tigger3b DNA MER2_type 1 721 -2307 2236 94 0 29 chr5 38458563 38458871 -161171279 + AluSg SINE Alu 1 299 -11 7468 136 34 5 chr5 38458871 38459398 -161170752 + Tigger3b DNA MER2_type 721 1231 0 310 305 46 48 chr5 38459398 38459644 -161170506 + MLT1J2 LTR MaLR 155 436 -14 311 159 66 0 chr5 38460358 38460509 -161169641 + (TA)n Simple_repeat Simple_repeat 1 161 0 2033 125 0 7 chr5 38460509 38460796 -161169354 - AluSg SINE Alu -25 285 1 244 61 0 61 chr5 38461080 38461129 -161169021 + (TTTTC)n Simple_repeat Simple_repeat 5 50 0 * 246 62 0 0 chr5 38461125 38461157 -161168993 + (TCCCG)n Simple_repeat Simple_repeat 4 35 0 * 498 17 0 0 chr5 38461155 38461214 -161168936 + (TCTCC)n Simple_repeat Simple_repeat 2 60 0 2249 111 7 0 chr5 38461214 38461511 -161168639 - AluSx SINE Alu -13 299 1 40878 73 7 3 chr5 38462927 38468968 -161161182 + L1PA5 LINE L1 11 6073 -81 616 141 8 55 chr5 38469121 38469408 -161160742 + (TCCA)n Simple_repeat Simple_repeat 1 273 0 537 218 257 15 chr5 38469731 38469937 -161160213 + MLT1L LTR MaLR 3 258 -357 779 251 35 15 chr5 38470870 38471069 -161159081 + MER3 DNA MER1_type 7 209 0 280 269 21 43 chr5 38472743 38472836 -161157314 + MER20 DNA MER1_type 1 91 -128 * 659 245 73 10 chr5 38472828 38473020 -161157130 + MER20 DNA MER1_type 16 219 0 453 217 58 14 chr5 38473555 38473693 -161156457 - L1ME4a LINE L1 0 6121 5978 1325 216 15 29 chr5 38474126 38474468 -161155682 - L1MC4 LINE L1 -2 8040 7704 1662 166 10 33 chr5 38474644 38474945 -161155205 - AluJb SINE Alu -18 294 1 261 0 0 0 chr5 38475237 38475266 -161154884 + (CA)n Simple_repeat Simple_repeat 1 29 0 366 333 19 31 chr5 38476476 38476638 -161153512 + L3 LINE CR1 949 1108 -469 874 244 72 0 chr5 38476673 38476882 -161153268 - MER58A DNA MER1_type 0 224 1 355 326 95 21 chr5 38476883 38477125 -161153025 + L3 LINE CR1 1276 1535 -42 184 321 0 73 chr5 38477204 38477313 -161152837 + L2 LINE L2 3161 3261 -11 682 274 87 4 chr5 38477450 38477691 -161152459 - MIR SINE MIR 0 262 2 457 242 0 90 chr5 38477717 38477895 -161152255 - L2 LINE L2 0 3313 3152 1895 74 53 39 chr5 38478086 38478370 -161151780 - L1PA11 LINE L1 0 6174 5887 261 275 11 11 chr5 38479115 38479206 -161150944 - MIR SINE MIR -9 253 163 186 327 0 0 chr5 38479336 38479391 -161150759 - L2 LINE L2 -4 3309 3255 274 341 80 14 chr5 38479426 38479564 -161150586 + MIR3 SINE MIR 2 148 -60 201 254 100 77 chr5 38480088 38480218 -161149932 + L3 LINE CR1 1313 1445 -132 22 0 0 0 chr5 38480455 38480477 -161149673 + AT_rich Low_complexity Low_complexity 1 22 0 327 297 146 38 chr5 38482430 38482642 -161147508 + MIR SINE MIR 28 262 0 325 284 92 14 chr5 38482689 38482830 -161147320 - MIR SINE MIR -77 185 34 1831 153 40 23 chr5 38483454 38483801 -161146349 + L1MB7 LINE L1 5746 6098 -86 375 208 56 0 chr5 38483801 38483873 -161146277 + Tigger5 DNA MER2_type 1 76 -2247 258 173 77 0 chr5 38483884 38483936 -161146214 - Tigger5 DNA MER2_type -19 2304 2249 400 145 0 108 chr5 38483941 38484024 -161146126 + Tigger5 DNA MER2_type 2250 2323 0 278 111 0 0 chr5 38484050 38484086 -161146064 + MER2 DNA MER2_type 1 36 -309 348 179 0 0 chr5 38484096 38484152 -161145998 - MER2 DNA MER2_type -234 111 56 1045 199 107 46 chr5 38484163 38484444 -161145706 + MER2 DNA MER2_type 48 345 0 239 203 68 0 chr5 38484445 38484504 -161145646 + L1MB7 LINE L1 6122 6184 0 2047 191 66 7 chr5 38486525 38486966 -161143184 + MLT1C LTR MaLR 1 467 0 2735 133 4 84 chr5 38487137 38487634 -161142516 - LTR32 LTR ERVL 0 471 15 267 279 41 20 chr5 38488252 38488399 -161141751 - L1MC5 LINE L1 -182 7779 7630 291 284 99 57 chr5 38488597 38488657 -161141493 - MIR3 SINE MIR -32 176 120 2646 183 26 51 chr5 38488657 38489225 -161140925 + MLT2B3 LTR ERVL 1 554 0 291 284 99 57 chr5 38489225 38489305 -161140845 - MIR3 SINE MIR -88 120 30 239 371 125 11 chr5 38489315 38489587 -161140563 - L3b LINE CR1 -128 1455 1153 1927 70 19 0 chr5 38489782 38490038 -161140112 + L1PB1 LINE L1 5891 6151 0 585 178 171 0 chr5 38490615 38490767 -161139383 - MER5B DNA MER1_type 0 178 1 1162 172 43 0 chr5 38492185 38492394 -161137756 - MER20 DNA MER1_type -1 218 1 901 176 74 0 chr5 38492606 38492782 -161137368 - MER5A DNA MER1_type 0 189 1 304 326 21 33 chr5 38492985 38493160 -161136990 - MIR SINE MIR -62 146 16 252 91 0 0 chr5 38493649 38493682 -161136468 + AluSg/x SINE Alu 171 203 -99 727 122 70 0 chr5 38493682 38493797 -161136353 + AluSg/x SINE Alu 170 292 -17 21 71 0 0 chr5 38493800 38493842 -161136308 + AT_rich Low_complexity Low_complexity 1 42 0 915 92 14 7 chr5 38494088 38494229 -161135921 + L1MB2 LINE L1 6030 6171 0 521 211 21 21 chr5 38494637 38494779 -161135371 - MER104 DNA Tc2 -3 177 36 302 167 19 0 chr5 38494792 38494846 -161135304 + L1MA9 LINE L1 5976 6030 -282 2135 91 63 3 chr5 38494980 38495267 -161134883 - AluSx SINE Alu -8 304 1 451 139 0 14 chr5 38696218 38696290 -160933860 + AluJo/FRAM SINE Alu 194 264 -48 2227 111 0 0 chr5 38696380 38696678 -160933472 - AluSx SINE Alu -14 298 1 910 147 17 34 chr5 38696888 38697065 -160933085 + FRAM SINE Alu 1 173 -3 365 247 22 22 chr5 38697136 38697225 -160932925 + L2 LINE L2 3184 3272 0 1488 192 59 21 chr5 38697325 38697612 -160932538 - AluJb SINE Alu -14 298 1 1986 130 10 0 chr5 38697752 38698044 -160932106 - AluSx SINE Alu -17 295 1 1869 158 0 7 chr5 38698049 38698367 -160931783 - AluJo SINE Alu 0 316 1 318 309 151 13 chr5 38698742 38698894 -160931256 - MIR SINE MIR -70 192 20 228 254 18 0 chr5 38699828 38699883 -160930267 - MIR SINE MIR -120 142 87 420 109 0 0 chr5 38699969 38700024 -160930126 - Alu SINE Alu -20 292 238 1752 96 0 4 chr5 38700025 38700255 -160929895 + AluSg/x SINE Alu 82 310 0 1718 117 6 102 chr5 38700284 38700617 -160929533 + AluSg1 SINE Alu 3 303 -6 2633 44 0 0 chr5 38700780 38701078 -160929072 - AluY SINE Alu -11 300 3 204 40 0 0 chr5 38702514 38702539 -160927611 + (TTG)n Simple_repeat Simple_repeat 3 27 0 1828 155 0 14 chr5 38702539 38702686 -160927464 - AluJb SINE Alu -32 280 137 2290 108 0 0 chr5 38702686 38702983 -160927167 - AluSg SINE Alu -13 297 1 1828 155 0 14 chr5 38702983 38703119 -160927031 - AluJb SINE Alu -175 137 1 29 0 0 0 chr5 38703254 38703283 -160926867 + AT_rich Low_complexity Low_complexity 1 29 0 2488 66 0 7 chr5 38703283 38703588 -160926562 - AluY SINE Alu -8 303 1 232 369 38 13 chr5 38703940 38704097 -160926053 + MER5A DNA MER1_type 28 188 -1 223 310 35 35 chr5 38705553 38705640 -160924510 + MIR SINE MIR 60 146 -116 2354 95 3 0 chr5 38705791 38706096 -160924054 - AluSx SINE Alu -1 311 6 1077 98 0 0 chr5 38706620 38706753 -160923397 - FLAM_C SINE Alu 0 133 1 2357 97 0 3 chr5 38708263 38708571 -160921579 + AluSx SINE Alu 1 307 -5 2099 109 3 3 chr5 38708889 38709216 -160920934 + AluSq SINE Alu 1 327 0 28 29 0 0 chr5 38709397 38709432 -160920718 + AT_rich Low_complexity Low_complexity 1 35 0 847 156 0 52 chr5 38709938 38710092 -160920058 + FRAM SINE Alu 1 40 0 505 213 182 106 chr5 38710132 38710489 -160919661 + L2 LINE L2 2927 3310 -3 185 346 74 0 chr5 38710843 38710924 -160919226 + L2 LINE L2 3150 3236 -36 2382 70 3 3 chr5 38711735 38712033 -160918117 + AluY SINE Alu 1 298 -13 594 264 116 5 chr5 38712626 38712842 -160917308 + MIR SINE MIR 20 259 -3 245 155 69 0 chr5 38713302 38713360 -160916790 + L1M4 LINE L1 5221 5282 -864 977 178 38 38 chr5 38715575 38715788 -160914362 - MER20 DNA MER1_type -6 213 1 726 205 0 0 chr5 38716460 38716577 -160913573 + FLAM_C SINE Alu 2 118 -15 1190 217 21 36 chr5 38716608 38716731 -160913419 + AluJo SINE Alu 18 141 -171 1930 126 10 23 chr5 38716731 38717032 -160913118 + AluSq SINE Alu 1 297 -16 1190 217 21 36 chr5 38717032 38717189 -160912961 + AluJo SINE Alu 141 294 -18 1173 239 134 19 chr5 38717192 38717934 -160912216 - L1MDa LINE L1 -2158 4382 3468 1973 228 45 63 chr5 38717995 38718027 -160912123 - L1MDa LINE L1 -3621 2919 2888 1881 138 19 22 chr5 38718027 38718338 -160911812 - AluSx SINE Alu -2 310 1 1973 228 45 63 chr5 38718338 38718645 -160911505 - L1MDa LINE L1 -3652 2888 2577 2257 104 3 7 chr5 38718645 38718952 -160911198 - AluSq SINE Alu -7 306 1 1666 89 181 4 chr5 38718957 38719216 -160910934 - AluSg1 SINE Alu -4 305 1 1973 228 45 63 chr5 38719216 38719437 -160910713 - L1MDa LINE L1 -3967 2573 2350 1688 144 6 73 chr5 38719437 38719764 -160910386 - AluJb SINE Alu -7 305 1 1973 228 45 63 chr5 38719764 38720219 -160909931 - L1MDa LINE L1 -4190 2350 1917 180 111 0 0 chr5 38720456 38720483 -160909667 + (CA)n Simple_repeat Simple_repeat 2 28 0 425 228 12 94 chr5 38720778 38720865 -160909285 + L2 LINE L2 1709 1777 -1537 2337 97 0 13 chr5 38720865 38721175 -160908975 - AluSx SINE Alu -6 306 1 425 228 12 94 chr5 38721175 38721258 -160908892 + L2 LINE L2 1777 1865 -1449 776 215 70 107 chr5 38721387 38721553 -160908597 + L1ME3A LINE L1 3117 3288 -2858 1411 208 24 10 chr5 38721553 38721841 -160908309 + AluJo SINE Alu 1 292 -20 776 215 70 107 chr5 38721841 38721931 -160908219 + L1ME3A LINE L1 3288 3380 -2766 2126 130 0 0 chr5 38721931 38722230 -160907920 + AluSx SINE Alu 1 299 -13 776 215 70 107 chr5 38722230 38722437 -160907713 + L1ME3A LINE L1 3380 3593 -2553 2141 111 7 0 chr5 38722437 38722717 -160907433 + AluSx SINE Alu 1 282 -30 216 0 0 0 chr5 38722722 38722746 -160907404 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 776 215 70 107 chr5 38722746 38722986 -160907164 + L1ME3A LINE L1 3597 3802 -2344 1082 294 89 45 chr5 38723032 38723526 -160906624 + REP3 LTR ERV 3 518 -44 1970 156 0 0 chr5 38723611 38723913 -160906237 + AluJo SINE Alu 3 304 -8 2564 71 0 0 chr5 38723913 38724221 -160905929 + AluSg SINE Alu 1 308 -2 379 246 42 67 chr5 38725208 38725337 -160904813 + L1ME3A LINE L1 5040 5162 -984 2441 61 0 3 chr5 38725337 38725634 -160904516 - AluY SINE Alu -15 296 1 379 246 42 67 chr5 38725634 38725744 -160904406 + L1ME3A LINE L1 5162 5273 -873 2115 102 14 17 chr5 38725746 38726040 -160904110 + AluSx SINE Alu 1 293 -19 1089 203 46 0 chr5 38726069 38726108 -160904042 + AluJb SINE Alu 85 121 -191 189 0 0 0 chr5 38726108 38726129 -160904021 + (TA)n Simple_repeat Simple_repeat 1 21 0 1089 203 46 0 chr5 38726129 38726306 -160903844 + AluJb SINE Alu 121 311 -1 2363 102 0 9 chr5 38726348 38726663 -160903487 + AluSx SINE Alu 1 312 0 1334 231 60 74 chr5 38726698 38726782 -160903368 + L1ME3A LINE L1 5379 5463 -707 2570 66 3 0 chr5 38726782 38727087 -160903063 + AluSp SINE Alu 1 306 -7 1334 231 60 74 chr5 38727087 38727246 -160902904 + L1ME3A LINE L1 5463 5623 -547 2199 117 0 22 chr5 38727246 38727563 -160902587 + AluSg SINE Alu 1 310 0 1334 231 60 74 chr5 38727563 38727833 -160902317 + L1ME3A LINE L1 5623 5887 -283 2204 114 0 7 chr5 38727833 38728132 -160902018 + AluSx SINE Alu 1 297 -15 1334 231 60 74 chr5 38728132 38728197 -160901953 + L1ME3A LINE L1 5887 5951 -219 695 210 0 51 chr5 38728364 38728502 -160901648 - FLAM_A SINE Alu -1 132 2 277 135 0 6 chr5 38728528 38728580 -160901570 + AluJb SINE Alu 1 37 -265 2012 128 3 24 chr5 38728580 38728878 -160901272 - AluSx SINE Alu -14 298 7 1834 132 0 4 chr5 38728886 38729188 -160900962 + AluJb SINE Alu 27 327 0 27 0 0 0 chr5 38729224 38729251 -160900899 + AT_rich Low_complexity Low_complexity 1 27 0 1552 189 40 7 chr5 38730946 38731247 -160898903 + AluJo SINE Alu 1 311 -1 2469 67 3 0 chr5 38731449 38731748 -160898402 - AluY SINE Alu -10 301 2 2139 112 0 10 chr5 38732019 38732313 -160897837 - AluSg SINE Alu -18 292 2 21 57 0 0 chr5 38732313 38732348 -160897802 + AT_rich Low_complexity Low_complexity 1 35 0 1992 112 6 86 chr5 38732507 38732846 -160897304 - AluSx SINE Alu 0 312 1 1496 184 122 0 chr5 38732946 38733250 -160896900 - MSTD LTR MaLR -55 341 1 221 56 0 28 chr5 38733277 38733313 -160896837 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 14740 22 3 0 chr5 38733313 38735755 -160894395 - L1PA3 LINE L1 -24 6131 3682 1785 123 0 0 chr5 38735793 38736036 -160894114 + AluSc SINE Alu 1 243 -66 2397 74 13 0 chr5 38736037 38736336 -160893814 + AluSp SINE Alu 1 303 -10 559 78 0 0 chr5 38736336 38736440 -160893710 + AluSc SINE Alu 236 339 0 12183 127 4 34 chr5 38736764 38738020 -160892130 + L1P LINE L1 630 1806 -4340 2165 120 3 0 chr5 38738020 38738321 -160891829 - AluSp SINE Alu -11 302 1 12183 127 4 34 chr5 38738321 38739087 -160891063 + L1P LINE L1 1806 2593 -3553 2026 106 0 43 chr5 38739666 38739969 -160890181 - AluSc SINE Alu -19 290 1 820 215 54 56 chr5 38740008 38740263 -160889887 + MLT1A2 LTR MaLR 1 263 -133 776 176 30 0 chr5 38740315 38740446 -160889704 - AluJo SINE Alu -176 136 2 689 152 36 9 chr5 38740449 38740561 -160889589 + MLT1A2 LTR MaLR 260 374 0 2171 112 6 13 chr5 38740588 38740901 -160889249 + AluSx SINE Alu 1 311 -1 2125 132 3 0 chr5 38741283 38741586 -160888564 + AluSx SINE Alu 5 308 -4 294 262 0 36 chr5 38741989 38742073 -160888077 + L1ME4a LINE L1 5960 6040 -81 30 0 0 0 chr5 38742074 38742104 -160888046 + AT_rich Low_complexity Low_complexity 1 30 0 1900 178 0 0 chr5 38742105 38742398 -160887752 + AluJo SINE Alu 1 293 -19 2522 65 0 3 chr5 38742400 38742710 -160887440 + AluY SINE Alu 1 309 -2 1684 177 17 23 chr5 38743070 38743370 -160886780 + AluJo SINE Alu 1 298 -14 1416 176 39 4 chr5 38744036 38744292 -160885858 + MER90 LTR ERV1 1 265 -310 2471 20 40 20 chr5 38744491 38744792 -160885358 - AluY SINE Alu -4 307 1 1349 180 34 102 chr5 38744852 38745064 -160885086 + MLT1A2 LTR MaLR 5 230 -144 2299 53 42 3 chr5 38745064 38745349 -160884801 + AluY SINE Alu 1 296 -15 1349 180 34 102 chr5 38745349 38745407 -160884743 + MLT1A2 LTR MaLR 230 290 -84 1649 161 0 25 chr5 38745407 38745687 -160884463 + AluJb SINE Alu 9 281 -31 1349 180 34 102 chr5 38745687 38745799 -160884351 + MLT1A2 LTR MaLR 290 362 -12 2132 125 3 6 chr5 38745989 38746300 -160883850 + AluSx SINE Alu 1 310 -2 1724 79 22 13 chr5 38746414 38746642 -160883508 + MER30 DNA MER1_type 1 230 0 667 245 75 33 chr5 38746800 38747012 -160883138 + MER74B LTR ERVL 55 275 -347 2483 69 3 3 chr5 38747012 38747317 -160882833 - AluSp SINE Alu -8 305 1 818 199 65 96 chr5 38747342 38747698 -160882452 - MER41C LTR ERV1 0 554 210 1960 140 7 0 chr5 38747698 38747983 -160882167 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr5 38747991 38748013 -160882137 + AT_rich Low_complexity Low_complexity 1 22 0 736 243 43 48 chr5 38748028 38748234 -160881916 - MER41C LTR ERV1 -340 214 15 2770 9 0 19 chr5 38748234 38748558 -160881592 - AluYb8 SINE Alu 0 318 1 736 243 43 48 chr5 38748558 38748573 -160881577 - MER41C LTR ERV1 -539 15 1 * 902 221 30 46 chr5 38748573 38748832 -160881318 + MER74B LTR ERVL 291 545 -77 349 269 103 19 chr5 38748694 38748850 -160881300 - MER88 LTR ERVL -219 245 77 * 927 184 0 17 chr5 38748886 38749060 -160881090 + AluJo SINE Alu 125 295 -17 282 303 112 44 chr5 38749293 38749587 -160880563 + MER110-int LTR ERV1 1893 2206 -2441 1029 305 22 63 chr5 38749739 38750185 -160879965 + MER110-int LTR ERV1 2342 2766 -1881 2022 101 42 0 chr5 38750185 38750472 -160879678 + AluSx SINE Alu 2 300 -12 1029 305 22 63 chr5 38750472 38750533 -160879617 + MER110-int LTR ERV1 2766 2828 -1819 189 0 0 0 chr5 38750538 38750559 -160879591 + (TG)n Simple_repeat Simple_repeat 2 22 0 1152 87 12 0 chr5 38750559 38750720 -160879430 - AluSp SINE Alu -14 299 137 307 230 62 71 chr5 38750763 38750876 -160879274 + MER110-int LTR ERV1 2847 2958 -1689 2122 111 7 3 chr5 38751207 38751513 -160878637 + AluSq SINE Alu 2 308 -5 1059 121 39 208 chr5 38752351 38752707 -160877443 - MER34C LTR ERV1 -289 296 1 2194 99 3 10 chr5 38752708 38753020 -160877130 - AluSx SINE Alu -2 310 1 1521 174 7 18 chr5 38753023 38753305 -160876845 - AluJo SINE Alu -19 293 15 2234 193 73 34 chr5 38753555 38753790 -160876360 + MER90 LTR ERV1 58 283 -331 1664 152 7 42 chr5 38753790 38753964 -160876186 - AluJo SINE Alu -14 298 138 2292 97 0 0 chr5 38753964 38754273 -160875877 - AluSx SINE Alu -3 309 1 1664 152 7 42 chr5 38754273 38754407 -160875743 - AluJo SINE Alu -174 138 1 2234 193 73 34 chr5 38754407 38754694 -160875456 + MER90 LTR ERV1 283 600 -14 2363 88 3 0 chr5 38756074 38756382 -160873768 + AluSx SINE Alu 1 309 -3 388 145 94 188 chr5 38756507 38756544 -160873606 + MSTC LTR MaLR 3 42 -386 2094 111 0 7 chr5 38756544 38756842 -160873308 - AluSq SINE Alu -17 296 1 2013 139 3 0 chr5 38756844 38757154 -160872996 - AluSx SINE Alu -1 311 1 388 145 94 188 chr5 38757154 38757202 -160872948 + MSTC LTR MaLR 43 76 -352 2162 109 7 0 chr5 38757202 38757495 -160872655 + AluSx SINE Alu 2 296 -16 388 145 94 188 chr5 38757495 38757543 -160872607 + MSTC LTR MaLR 76 127 -301 1096 166 0 6 chr5 38757546 38757723 -160872427 - LTR32 LTR ERVL -4 467 292 1061 95 12 24 chr5 38757723 38757892 -160872258 - MER4C LTR ERV1 0 465 299 1550 105 5 0 chr5 38757893 38758103 -160872047 + AluSx SINE Alu 1 211 -101 336 130 0 0 chr5 38758103 38758149 -160872001 + AluSx SINE Alu 243 288 -13 2169 108 0 0 chr5 38758165 38758470 -160871680 - MER4C LTR ERV1 -158 307 3 1096 176 0 0 chr5 38758472 38758648 -160871502 - LTR32 LTR ERVL -176 295 120 2678 157 0 58 chr5 38759003 38759198 -160870952 - LTR32 LTR ERVL 0 471 266 2279 62 0 7 chr5 38759198 38759488 -160870662 - AluSc SINE Alu -21 288 1 2678 157 0 58 chr5 38759488 38759777 -160870373 - LTR32 LTR ERVL -205 266 15 2129 108 6 10 chr5 38761025 38761339 -160868811 - AluSq SINE Alu 0 313 1 321 348 55 30 chr5 38761654 38761855 -160868295 + L1M4b LINE L1 544 749 -6110 679 148 98 0 chr5 38761855 38762013 -160868137 - AluJb SINE Alu 0 318 149 2279 79 7 20 chr5 38762199 38762504 -160867646 + AluSq SINE Alu 1 301 -12 239 259 17 0 chr5 38762748 38762806 -160867344 + L1ME LINE L1 5753 5811 -353 318 300 0 60 chr5 38763029 38763129 -160867021 - L1MC4 LINE L1 -1337 6705 6612 305 225 14 106 chr5 38763133 38763275 -160866875 + L1MC4 LINE L1 6595 6723 -1319 302 76 0 76 chr5 38763275 38763367 -160866783 + (TA)n Simple_repeat Simple_repeat 2 86 0 319 204 10 82 chr5 38763370 38763468 -160866682 + L1MC4 LINE L1 6613 6703 -1339 308 182 20 111 chr5 38763408 38763507 -160866643 - L1MC4 LINE L1 -1339 6703 6614 * 454 104 0 77 chr5 38763525 38763708 -160866442 + (TA)n Simple_repeat Simple_repeat 1 169 0 315 226 26 70 chr5 38763712 38763827 -160866323 + L1MC4 LINE L1 6614 6723 -1319 308 189 56 56 chr5 38763760 38763850 -160866300 - L1MC4 LINE L1 -1339 6703 6614 * 315 222 17 77 chr5 38763844 38763961 -160866189 + L1MC4 LINE L1 6614 6723 -1319 306 196 21 93 chr5 38763948 38764045 -160866105 - L1MC4 LINE L1 -1339 6703 6614 * 307 221 11 63 chr5 38763989 38764084 -160866066 + L1MC4 LINE L1 6614 6703 -1339 309 71 0 71 chr5 38764089 38764174 -160865976 + (TA)n Simple_repeat Simple_repeat 2 80 0 329 200 29 73 chr5 38764178 38764317 -160865833 + L1MC4 LINE L1 6614 6723 -1319 635 65 0 65 chr5 38764317 38764472 -160865678 + (TA)n Simple_repeat Simple_repeat 2 146 0 383 184 64 68 chr5 38764480 38764803 -160865347 + L1MB8 LINE L1 5148 5471 -707 2286 103 0 0 chr5 38764803 38765114 -160865036 + AluSq SINE Alu 1 311 -2 383 184 64 68 chr5 38765114 38765463 -160864687 + L1MB8 LINE L1 5471 5820 -358 1421 172 31 14 chr5 38765463 38765754 -160864396 + AluJb SINE Alu 1 296 -16 1864 115 52 3 chr5 38765758 38766045 -160864105 + AluSx SINE Alu 1 301 -11 383 184 64 68 chr5 38766045 38766136 -160864014 + L1MB8 LINE L1 5823 6025 -153 2141 103 0 6 chr5 38766167 38766479 -160863671 + AluY SINE Alu 2 311 0 2893 178 26 12 chr5 38766491 38766996 -160863154 + MER21B LTR ERV1 21 532 -331 242 175 35 0 chr5 38766996 38767053 -160863097 + L1M4 LINE L1 3642 3700 -2446 1816 147 0 50 chr5 38767053 38767372 -160862778 + AluSx SINE Alu 1 303 -9 2151 112 0 0 chr5 38768805 38769159 -160860991 - AluSq SINE Alu 0 313 1 1377 137 9 9 chr5 38769233 38769460 -160860690 + AluJo SINE Alu 85 311 -1 1222 229 18 0 chr5 38769469 38769805 -160860345 + L1M4 LINE L1 3687 4028 -2118 2118 98 0 3 chr5 38769805 38770110 -160860040 + AluSx SINE Alu 1 304 -8 1014 112 11 17 chr5 38770212 38770391 -160859759 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2041 114 3 19 chr5 38770393 38770518 -160859632 - AluSx SINE Alu 0 425 300 1620 0 0 0 chr5 38770518 38770698 -160859452 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2041 114 3 19 chr5 38770698 38771002 -160859148 - AluSx SINE Alu -125 300 1 2444 73 0 3 chr5 38771019 38771333 -160858817 - AluSp SINE Alu 0 313 1 1342 201 22 11 chr5 38771412 38771690 -160858460 + AluJb SINE Alu 1 281 -31 297 0 0 0 chr5 38771693 38771726 -160858424 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 980 163 0 123 chr5 38772341 38772593 -160857557 + AluJb SINE Alu 82 302 -10 667 301 49 12 chr5 38772650 38772975 -160857175 + L1MA10 LINE L1 5660 5996 -172 * 1368 222 18 15 chr5 38772688 38773026 -160857124 + L1ME1 LINE L1 5704 6042 -124 1703 214 41 48 chr5 38773115 38773527 -160856623 + LTR2 LTR ERV1 41 449 0 553 203 16 16 chr5 38773527 38773655 -160856495 + L1ME1 LINE L1 6039 6166 0 * 1451 227 35 54 chr5 38773627 38774111 -160856039 + L1ME1 LINE L1 5636 6110 -56 2232 87 0 3 chr5 38774113 38774411 -160855739 + AluSp SINE Alu 1 297 -16 25 0 0 0 chr5 38774434 38774459 -160855691 + AT_rich Low_complexity Low_complexity 1 25 0 852 136 0 0 chr5 38774548 38774673 -160855477 - FLAM_C SINE Alu -8 125 1 463 265 7 7 chr5 38775634 38775785 -160854365 + L1MA10 LINE L1 6184 6334 0 333 296 127 48 chr5 38775787 38775976 -160854174 - L2 LINE L2 -420 2894 2691 2184 116 3 0 chr5 38776131 38776442 -160853708 + AluSx SINE Alu 1 312 0 260 274 33 4 chr5 38776459 38776526 -160853624 - MIR SINE MIR -61 147 86 762 179 0 0 chr5 38777910 38778027 -160852123 + FLAM_C SINE Alu 2 118 -25 195 42 0 0 chr5 38778031 38778055 -160852095 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 734 334 36 22 chr5 38778751 38779113 -160851037 + L2 LINE L2 2947 3313 0 2039 106 21 0 chr5 38779388 38779670 -160850480 - AluSg SINE Alu -20 290 3 1666 148 46 7 chr5 38779675 38779959 -160850191 - AluJb SINE Alu -17 295 1 2319 97 0 0 chr5 38780123 38780433 -160849717 - AluSx SINE Alu -2 310 1 424 181 0 0 chr5 38780451 38780534 -160849616 + AluJ/FRAM SINE Alu 226 308 -4 318 262 86 61 chr5 38780690 38780851 -160849299 - L1MC5 LINE L1 -246 7715 7559 1058 103 0 0 chr5 38780851 38780997 -160849153 + L1PA10 LINE L1 6016 6161 -7 2123 113 3 7 chr5 38781000 38781310 -160848840 + AluSx SINE Alu 1 309 -3 318 262 86 61 chr5 38781310 38781587 -160848563 - L1MC5 LINE L1 -403 7558 7262 1913 127 10 21 chr5 38781623 38781914 -160848236 - AluSx SINE Alu -24 288 1 2409 177 32 54 chr5 38782051 38782210 -160847940 - L1MB7 LINE L1 -16 6168 6007 1934 126 4 0 chr5 38782210 38782488 -160847662 - AluSp SINE Alu -34 279 1 2409 177 32 54 chr5 38782488 38782917 -160847233 - L1MB7 LINE L1 -177 6007 5593 192 40 0 0 chr5 38783142 38783167 -160846983 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2573 163 23 91 chr5 38784017 38784214 -160845936 - L1PB1 LINE L1 0 6151 5942 1835 124 0 40 chr5 38784214 38784513 -160845637 - AluSx SINE Alu -25 287 1 2573 163 23 91 chr5 38784513 38784698 -160845452 - L1PB1 LINE L1 -209 5942 5746 239 133 0 0 chr5 38784698 38784743 -160845407 - LTR66 LTR ERVL -172 438 394 2573 163 23 91 chr5 38784743 38785038 -160845112 - L1PB1 LINE L1 -405 5746 5518 2482 51 0 6 chr5 38785038 38785351 -160844799 - AluY SINE Alu 0 311 1 2573 163 23 91 chr5 38785351 38785470 -160844680 - L1PB1 LINE L1 -633 5518 5392 337 57 0 0 chr5 38785483 38785536 -160844614 - AluSp/q SINE Alu 0 303 251 261 215 103 65 chr5 38785569 38785676 -160844474 + MIR SINE MIR 20 130 -78 2393 63 7 0 chr5 38786633 38786935 -160843215 - AluSp SINE Alu -9 304 1 198 118 0 0 chr5 38787686 38787720 -160842430 + (TTTCC)n Simple_repeat Simple_repeat 4 37 0 1612 163 24 7 chr5 38788231 38788525 -160841625 + AluJb SINE Alu 1 299 -13 1836 134 0 3 chr5 38788600 38788891 -160841259 + AluSg SINE Alu 3 292 -18 990 236 9 103 chr5 38789215 38789545 -160840605 - AluJb SINE Alu -3 299 1 363 113 0 0 chr5 38789801 38789863 -160840287 + (GA)n Simple_repeat Simple_repeat 1 62 0 513 71 0 0 chr5 38791186 38791256 -160838894 + (TC)n Simple_repeat Simple_repeat 1 70 0 387 0 0 0 chr5 38791856 38791899 -160838251 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 183 42 0 0 chr5 38792556 38792580 -160837570 + (CCGGG)n Simple_repeat Simple_repeat 4 27 0 414 85 0 0 chr5 38794156 38794215 -160835935 + (TC)n Simple_repeat Simple_repeat 2 60 0 315 0 0 0 chr5 38794818 38794853 -160835297 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr5 38795510 38795535 -160834615 + GC_rich Low_complexity Low_complexity 1 25 0 414 85 0 0 chr5 38795877 38795936 -160834214 + (GA)n Simple_repeat Simple_repeat 2 60 0 273 29 0 0 chr5 38797511 38797545 -160832605 + (CCCGG)n Simple_repeat Simple_repeat 4 37 0 351 0 0 0 chr5 38798202 38798241 -160831909 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 414 85 0 0 chr5 38798845 38798904 -160831246 + (GA)n Simple_repeat Simple_repeat 2 60 0 25 0 0 0 chr5 38800503 38800528 -160829622 + GC_rich Low_complexity Low_complexity 1 25 0 605 234 18 24 chr5 38801021 38801188 -160828962 + AluSg SINE Alu 22 187 -123 273 29 0 0 chr5 38801579 38801613 -160828537 + (CCGGG)n Simple_repeat Simple_repeat 4 37 0 504 72 0 0 chr5 38802386 38802455 -160827695 + (GA)n Simple_repeat Simple_repeat 2 70 0 212 0 36 0 chr5 38803331 38803359 -160826791 + (CCCGG)n Simple_repeat Simple_repeat 4 32 0 477 0 0 0 chr5 38905000 38905053 -160725097 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 242 276 0 53 chr5 38907430 38907506 -160722644 - MIR SINE MIR -109 153 82 30 0 0 0 chr5 38908377 38908407 -160721743 + AT_rich Low_complexity Low_complexity 1 30 0 215 184 41 20 chr5 38908505 38908554 -160721596 + GA-rich Low_complexity Low_complexity 4 53 0 29 0 0 0 chr5 38908557 38908586 -160721564 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 38910299 38910328 -160719822 + AT_rich Low_complexity Low_complexity 1 29 0 197 304 76 0 chr5 38910571 38910663 -160719487 - MIR SINE MIR 0 262 164 731 199 6 60 chr5 38910722 38910888 -160719262 + MIR SINE MIR 84 240 -22 2365 74 0 3 chr5 38911542 38911838 -160718312 - AluY SINE Alu -14 297 3 209 175 0 35 chr5 38912909 38912966 -160717184 + T-rich Low_complexity Low_complexity 6 60 0 1314 165 47 88 chr5 38912968 38913265 -160716885 - AluJb SINE Alu -23 289 5 2234 107 0 3 chr5 38913790 38914090 -160716060 + AluSx SINE Alu 1 299 -13 582 258 17 88 chr5 38914936 38915176 -160714974 + MIR SINE MIR 26 248 -14 22 0 0 0 chr5 38917869 38917891 -160712259 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 38919473 38919503 -160710647 + AT_rich Low_complexity Low_complexity 1 30 0 212 228 105 18 chr5 38919999 38920056 -160710094 + L2 LINE L2 3210 3271 -1 377 212 0 0 chr5 38921097 38921163 -160708987 + MER5B DNA MER1_type 1 66 -112 456 19 0 0 chr5 38921202 38921255 -160708895 + (CA)n Simple_repeat Simple_repeat 2 54 0 269 346 29 29 chr5 38921479 38921687 -160708463 - L2 LINE L2 -1377 1937 1730 454 220 77 6 chr5 38922857 38923025 -160707125 - Charlie7 DNA MER1_type -1 2611 2432 288 151 55 14 chr5 38923011 38923084 -160707066 - Charlie7 DNA MER1_type -2507 105 30 * 367 363 44 11 chr5 38923439 38923621 -160706529 + MIR3 SINE MIR 11 198 -10 2365 43 7 20 chr5 38923812 38924112 -160706038 + AluY SINE Alu 1 296 -15 318 26 0 0 chr5 38924806 38924845 -160705305 + (TG)n Simple_repeat Simple_repeat 1 39 0 272 319 187 18 chr5 38924951 38925117 -160705033 + MIR SINE MIR 48 241 -21 210 277 53 0 chr5 38925299 38925393 -160704757 + MIR SINE MIR 33 131 -77 * 1682 280 108 11 chr5 38925363 38926108 -160704042 + L2 LINE L2 2363 3187 -126 1852 133 0 11 chr5 38926108 38926379 -160703771 - AluSq SINE Alu -45 268 1 359 252 29 29 chr5 38926546 38926649 -160703501 + MER5A DNA MER1_type 4 106 -83 2106 137 10 0 chr5 38928716 38929009 -160701141 + AluSx SINE Alu 1 296 -16 211 224 112 121 chr5 38929286 38929402 -160700748 + L2 LINE L2 3183 3297 -16 253 346 29 15 chr5 38929629 38929765 -160700385 + L2 LINE L2 2917 3054 -218 922 290 138 17 chr5 38929844 38930442 -160699708 - L2 LINE L2 0 3313 2634 186 209 0 0 chr5 38933097 38933140 -160697010 + (CATA)n Simple_repeat Simple_repeat 4 46 0 663 245 121 48 chr5 38933187 38933600 -160696550 - L1ME4a LINE L1 -95 6026 5584 44 0 0 0 chr5 38935661 38935705 -160694445 + AT_rich Low_complexity Low_complexity 1 44 0 302 278 83 9 chr5 38935715 38935732 -160694418 + L1MC4 LINE L1 6588 6602 -1440 3479 54 0 9 chr5 38935732 38936174 -160693976 - L1PA5 LINE L1 0 6154 5717 302 278 83 9 chr5 38936174 38936264 -160693886 + L1MC4 LINE L1 6602 6703 -1339 * 334 250 0 48 chr5 38936188 38936292 -160693858 - L1MC4 LINE L1 -1339 6703 6605 208 209 22 0 chr5 38936292 38936383 -160693767 + (TA)n Simple_repeat Simple_repeat 1 93 0 710 286 94 0 chr5 38936436 38936670 -160693480 + MIR SINE MIR 5 260 -2 2112 79 0 4 chr5 38937700 38937965 -160692185 - AluSq SINE Alu -19 294 31 193 267 105 57 chr5 38938208 38938313 -160691837 + L2 LINE L2 3145 3254 -18 232 266 0 0 chr5 38938573 38938637 -160691513 + A-rich Low_complexity Low_complexity 1 64 0 724 259 80 42 chr5 38938963 38939202 -160690948 + MIR SINE MIR 15 262 0 470 78 0 122 chr5 38939212 38939251 -160690899 + MADE1 DNA Mariner 1 25 -55 2138 81 3 62 chr5 38939251 38939571 -160690579 - AluY SINE Alu -10 301 1 470 78 0 122 chr5 38939571 38939621 -160690529 + MADE1 DNA Mariner 25 79 -1 1739 196 3 0 chr5 38940772 38941073 -160689077 + AluJo SINE Alu 1 302 -10 298 279 209 17 chr5 38941702 38941874 -160688276 - MIR SINE MIR -6 256 52 2423 266 86 14 chr5 38942753 38943861 -160686289 + L2 LINE L2 2076 3262 -51 607 293 35 34 chr5 38944793 38945040 -160685110 - MIR SINE MIR -10 252 3 1168 254 78 27 chr5 38945475 38945715 -160684435 - L1M4 LINE L1 -2174 3972 3746 529 31 0 0 chr5 38945715 38945780 -160684370 - L1PA5 LINE L1 -7 6147 6083 1168 254 78 27 chr5 38945780 38946168 -160683982 - L1M4 LINE L1 -2400 3746 3312 491 285 66 96 chr5 38946402 38946798 -160683352 + L3 LINE CR1 419 802 -775 799 266 66 20 chr5 38946824 38947068 -160683082 - MIR SINE MIR 0 262 8 483 302 90 62 chr5 38947061 38947658 -160682492 + L3 LINE CR1 828 1493 -84 * 254 254 28 14 chr5 38947971 38948042 -160682108 + L3 LINE CR1 1495 1566 -11 242 326 53 79 chr5 38948048 38948428 -160681722 + L2 LINE L2 2376 2745 -569 1778 193 0 0 chr5 38948434 38948724 -160681426 + AluJo SINE Alu 1 290 -22 21 0 0 0 chr5 38948724 38948745 -160681405 + AT_rich Low_complexity Low_complexity 1 21 0 875 235 6 0 chr5 38948746 38948912 -160681238 + AluJb SINE Alu 134 300 -12 303 104 0 0 chr5 38949229 38949277 -160680873 + (TG)n Simple_repeat Simple_repeat 1 48 0 815 269 43 35 chr5 38950431 38950687 -160679463 - MIR SINE MIR -3 259 2 1982 142 3 3 chr5 38950831 38951120 -160679030 + AluSx SINE Alu 1 289 -23 235 282 105 8 chr5 38951613 38951737 -160678413 - Charlie8 DNA MER1_type -1987 430 295 1012 98 0 0 chr5 38951745 38952068 -160678082 + AluSp SINE Alu 1 323 0 404 231 22 0 chr5 38952170 38952261 -160677889 - Charlie8 DNA MER1_type -2278 139 47 271 309 67 138 chr5 38952421 38952631 -160677519 - MER91A DNA MER1_type 0 196 2 2362 95 0 0 chr5 38953030 38953334 -160676816 + AluSc SINE Alu 1 304 -5 187 278 93 0 chr5 38953957 38954011 -160676139 + L3b LINE CR1 1274 1332 -251 619 243 130 0 chr5 38955875 38956037 -160674113 - MER5A DNA MER1_type 0 189 4 232 287 37 37 chr5 38956058 38956194 -160673956 + L1M2 LINE L1 5524 5659 -641 218 159 45 0 chr5 38956197 38956241 -160673909 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 1930 152 35 0 chr5 38956765 38957054 -160673096 + AluSx SINE Alu 1 299 -13 2259 120 0 0 chr5 38957088 38957397 -160672753 - AluSx SINE Alu -3 309 1 306 0 0 0 chr5 38957444 38957478 -160672672 + (TA)n Simple_repeat Simple_repeat 1 34 0 482 350 41 16 chr5 38961547 38961793 -160668357 + L3b LINE CR1 1112 1363 -220 2407 100 0 0 chr5 38961803 38962114 -160668036 - AluSx SINE Alu -1 311 1 206 326 10 77 chr5 38962533 38962661 -160667489 + MIR3 SINE MIR 46 162 -46 261 146 0 0 chr5 38962692 38962740 -160667410 + (ATG)n Simple_repeat Simple_repeat 1 48 0 349 264 200 0 chr5 38964017 38964157 -160665993 - MIR SINE MIR 0 262 95 315 328 50 0 chr5 38964461 38964580 -160665570 + MIR SINE MIR 77 201 -61 2227 119 0 0 chr5 38964958 38965261 -160664889 - AluSq SINE Alu -10 303 1 982 202 44 39 chr5 38966517 38966879 -160663271 + L1M4 LINE L1 3327 3690 -2456 4591 107 10 0 chr5 38966879 38967553 -160662597 - LOR1-int LTR ERV1 -3984 4136 3456 1497 141 11 38 chr5 38967553 38967908 -160662242 - MER4A LTR ERV1 0 664 261 669 91 0 10 chr5 38967908 38968007 -160662143 - MER4A LTR ERV1 -566 98 1 1488 113 17 0 chr5 38968007 38968237 -160661913 - LOR1-int LTR ERV1 -4661 3459 3226 710 100 0 0 chr5 38968237 38968337 -160661813 - AluSg/x SINE Alu -13 299 200 2930 94 16 0 chr5 38968343 38968788 -160661362 - LOR1-int LTR ERV1 -4925 3195 2744 286 170 40 10 chr5 38968993 38969093 -160661057 + (TA)n Simple_repeat Simple_repeat 1 103 0 375 123 0 15 chr5 38969183 38969248 -160660902 - MER4A LTR ERV1 -566 98 35 267 171 0 29 chr5 38969225 38969295 -160660855 + LTR66 LTR ERVL 376 443 -167 * 231 214 0 0 chr5 38969295 38969337 -160660813 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 337 189 44 56 chr5 38969343 38969433 -160660717 + L1MC4 LINE L1 6614 6702 -1340 13371 94 50 13 chr5 38969437 38971649 -160658501 - LOR1b-int LTR ERV1 -5477 2643 350 2522 113 25 0 chr5 38971651 38972015 -160658135 - THE1C LTR MaLR -2 373 1 9891 113 28 19 chr5 38972021 38973203 -160656947 - THE1C-int LTR MaLR -6 1574 372 2061 141 40 0 chr5 38973203 38973501 -160656649 + AluSx SINE Alu 1 310 -2 9891 113 28 19 chr5 38973501 38973877 -160656273 - THE1C-int LTR MaLR -1208 372 1 2464 115 19 0 chr5 38973877 38974241 -160655909 - THE1C LTR MaLR 0 375 5 1843 179 23 14 chr5 38974244 38974776 -160655374 - LOR1b-int LTR ERV1 -7704 416 1 1580 142 12 0 chr5 38974776 38975029 -160655121 - LOR1b LTR ERV1 0 461 206 2015 154 6 12 chr5 38975158 38975488 -160654662 - MER1B DNA MER1_type -8 331 4 286 253 0 0 chr5 38975534 38975609 -160654541 + L1M4 LINE L1 3969 4043 -2103 1797 269 40 10 chr5 38975710 38976390 -160653760 + L1M4 LINE L1 4256 4955 -1191 2089 134 0 0 chr5 38976399 38976690 -160653460 - AluSx SINE Alu -21 291 1 518 244 75 25 chr5 38977765 38977966 -160652184 + MLT1J LTR MaLR 5 215 -296 1427 126 24 5 chr5 38978492 38978699 -160651451 - AluJb SINE Alu -17 295 85 246 32 0 0 chr5 38979630 38979661 -160650489 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 1076 180 11 6 chr5 38980077 38980260 -160649890 - AluJo SINE Alu -128 184 1 920 242 21 0 chr5 38982005 38982199 -160647951 - MER58A DNA MER1_type -1 223 26 24 32 0 0 chr5 38982238 38982269 -160647881 + AT_rich Low_complexity Low_complexity 1 31 0 263 268 102 51 chr5 38982304 38982461 -160647689 - L2 LINE L2 -12 3301 3137 2164 136 0 7 chr5 38982559 38982867 -160647283 + AluSx SINE Alu 1 306 -6 223 253 0 33 chr5 38983130 38983221 -160646929 + CT-rich Low_complexity Low_complexity 1 88 0 326 302 12 0 chr5 38983732 38983818 -160646332 + L2 LINE L2 3213 3299 -14 21 36 0 0 chr5 38984774 38984802 -160645348 + AT_rich Low_complexity Low_complexity 1 28 0 184 331 83 8 chr5 38985073 38985194 -160644956 - MIR SINE MIR -123 139 10 668 267 56 6 chr5 38987526 38987706 -160642444 + MIR SINE MIR 32 220 -42 1860 225 72 19 chr5 38990089 38991145 -160639005 - L1ME2 LINE L1 -12 6152 5008 328 43 0 0 chr5 38991146 38991192 -160638958 - L1PA3 LINE L1 0 6155 6110 27911 46 5 2 chr5 38991293 38994999 -160635151 - L1P LINE L1 -1014 5132 1419 296 263 86 7 chr5 38995145 38995297 -160634853 - L1ME2 LINE L1 -2755 3391 3228 203 116 47 0 chr5 38996235 38996278 -160633872 + CT-rich Low_complexity Low_complexity 4 48 0 1410 202 55 55 chr5 38996377 38996758 -160633392 - MLT2C2 LTR ERVL -2 462 82 251 258 0 30 chr5 38997813 38997879 -160632271 + MER91 DNA MER1_type 119 182 -8 189 265 0 0 chr5 38998020 38998069 -160632081 + MIR SINE MIR 101 149 -113 385 237 92 27 chr5 38999048 38999440 -160630710 - MLT1J2 LTR MaLR 0 446 1 2114 109 3 0 chr5 39000693 39000976 -160629174 - AluSx SINE Alu -23 289 6 22 35 0 0 chr5 39000980 39001009 -160629141 + AT_rich Low_complexity Low_complexity 1 29 0 182 298 0 0 chr5 39001125 39001182 -160628968 + L3 LINE CR1 1362 1418 -159 418 297 113 57 chr5 39001191 39001602 -160628548 + L1MC/D LINE L1 5144 5576 -757 386 291 24 0 chr5 39003794 39003921 -160626229 - MIR3 SINE MIR -49 159 30 258 273 0 30 chr5 39005226 39005325 -160624825 + GA-rich Low_complexity Low_complexity 4 99 0 451 291 46 70 chr5 39005325 39005585 -160624565 - MIR SINE MIR 0 262 14 434 275 0 8 chr5 39005633 39005753 -160624397 + MER94 DNA DNA 5 123 -11 212 327 0 0 chr5 39006785 39006840 -160623310 - L2 LINE L2 -13 3259 3205 23 0 0 0 chr5 39006914 39006937 -160623213 + AT_rich Low_complexity Low_complexity 1 23 0 316 270 99 0 chr5 39007158 39007269 -160622881 - MIR SINE MIR -82 180 59 430 170 21 32 chr5 39008155 39008249 -160621901 + Charlie3 DNA MER1_type 2620 2712 0 217 189 11 42 chr5 39008843 39008938 -160621212 + CT-rich Low_complexity Low_complexity 1 92 0 2177 233 71 43 chr5 39008938 39009227 -160620923 - MLT1E LTR MaLR -42 551 272 216 86 0 0 chr5 39009227 39009262 -160620888 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1994 109 3 21 chr5 39009263 39009548 -160620602 - AluSx SINE Alu -32 280 1 2177 233 71 43 chr5 39009548 39009792 -160620358 - MLT1E LTR MaLR -320 273 1 2581 178 30 19 chr5 39009896 39010358 -160619792 + MLT1C LTR MaLR 1 467 0 460 250 48 125 chr5 39011073 39011385 -160618765 + L2 LINE L2 2922 3209 -104 192 379 35 9 chr5 39011585 39011701 -160618449 + L2 LINE L2 2639 2757 -557 2421 139 123 3 chr5 39011711 39012093 -160618057 + MSTA LTR MaLR 1 428 0 2115 210 42 36 chr5 39012118 39012617 -160617533 - MLT1D LTR MaLR 0 505 4 321 354 63 56 chr5 39012693 39012978 -160617172 + L2 LINE L2 2986 3272 0 24 0 0 0 chr5 39013961 39013985 -160616165 + AT_rich Low_complexity Low_complexity 1 24 0 561 308 25 14 chr5 39013994 39014273 -160615877 + L1ME4a LINE L1 4023 4304 -1842 385 281 149 61 chr5 39014472 39015010 -160615140 + L1ME4a LINE L1 4639 5223 -923 232 354 68 14 chr5 39015063 39015343 -160614807 + L1ME4a LINE L1 5280 5574 -588 233 170 0 19 chr5 39015431 39015484 -160614666 + L1ME4a LINE L1 5768 5819 -302 390 197 87 94 chr5 39015825 39015952 -160614198 - MLT1H LTR MaLR 0 549 424 617 270 143 44 chr5 39016008 39016301 -160613849 - MLT1H LTR MaLR -221 328 7 268 200 0 0 chr5 39016877 39016932 -160613218 + L1ME4a LINE L1 5956 6010 -111 408 241 0 0 chr5 39017020 39017136 -160613014 + (TA)n Simple_repeat Simple_repeat 1 116 0 228 140 40 40 chr5 39017137 39017187 -160612963 + L1MD3 LINE L1 6619 6668 -1327 26 64 0 0 chr5 39017192 39017239 -160612911 + AT_rich Low_complexity Low_complexity 1 47 0 291 246 14 101 chr5 39018033 39018171 -160611979 + L2 LINE L2 3187 3312 -1 218 245 19 0 chr5 39018170 39018223 -160611927 + L2 LINE L2 2283 2336 -978 * 243 306 14 0 chr5 39018706 39018778 -160611372 - MER21A LTR ERV1 -127 804 732 1228 179 4 52 chr5 39018858 39019113 -160611037 - MLT2C2 LTR ERVL 0 464 232 774 150 0 21 chr5 39019144 39019284 -160610866 - MLT1A1 LTR MaLR -228 137 1 2186 222 116 21 chr5 39019361 39020023 -160610127 + MER50 LTR ERV1 10 734 0 4470 134 15 126 chr5 39020366 39021918 -160608232 - pTR5 LTR ERV1 0 2606 1524 466 254 154 110 chr5 39022246 39022675 -160607475 + MLT1J2 LTR MaLR 2 449 -1 2256 73 0 57 chr5 39023278 39023595 -160606555 + AluY SINE Alu 1 299 -12 233 125 0 42 chr5 39024403 39024451 -160605699 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 452 163 12 0 chr5 39025045 39025125 -160605025 - MER3 DNA MER1_type 0 209 129 201 217 52 9 chr5 39025125 39025240 -160604910 + (TA)n Simple_repeat Simple_repeat 2 121 0 863 191 0 0 chr5 39025304 39025451 -160604699 - MER3 DNA MER1_type -62 147 1 2034 117 3 7 chr5 39026290 39026626 -160603524 - AluSq SINE Alu 0 335 1 23 0 0 0 chr5 39026884 39026907 -160603243 + AT_rich Low_complexity Low_complexity 1 23 0 2003 147 3 3 chr5 39028972 39029284 -160600866 + AluSx SINE Alu 1 312 0 225 239 141 0 chr5 39029798 39029869 -160600281 + L2 LINE L2 3233 3313 0 198 0 0 0 chr5 39031237 39031259 -160598891 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 1922 118 25 21 chr5 39031897 39032201 -160597949 - AluSx SINE Alu 0 305 1 359 335 17 39 chr5 39034257 39034436 -160595714 + MER5A DNA MER1_type 2 176 -13 25 0 0 0 chr5 39034633 39034658 -160595492 + AT_rich Low_complexity Low_complexity 1 25 0 421 228 34 114 chr5 39034801 39035038 -160595112 + MLT1J LTR MaLR 101 318 -193 29 0 0 0 chr5 39035779 39035808 -160594342 + AT_rich Low_complexity Low_complexity 1 29 0 185 286 65 0 chr5 39036462 39036539 -160593611 + MIR SINE MIR 172 253 -9 336 337 26 26 chr5 39036627 39036798 -160593352 - MER5A DNA MER1_type -4 185 4 21 0 0 0 chr5 39037954 39037975 -160592175 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr5 39039178 39039202 -160590948 + (CA)n Simple_repeat Simple_repeat 1 24 0 1167 202 85 8 chr5 39039204 39039462 -160590688 + L1MC3 LINE L1 5909 6186 -1599 * 3619 186 66 5 chr5 39039437 39040190 -160589960 + L1MC3 LINE L1 6845 7643 -142 43321 50 3 1 chr5 39040211 39046348 -160583802 + L1PA4 LINE L1 1 6152 -3 5426 94 42 7 chr5 39046351 39047083 -160583067 + L1PA7 LINE L1 5384 6141 -13 189 0 0 0 chr5 39047649 39047670 -160582480 + (TA)n Simple_repeat Simple_repeat 1 21 0 387 212 25 76 chr5 39049298 39049416 -160580734 - MIR3 SINE MIR -31 177 66 303 273 5 127 chr5 39050221 39050441 -160579709 + MIR3 SINE MIR 16 208 0 2811 178 34 2 chr5 39051883 39052378 -160577772 + L1MB5 LINE L1 5656 6166 -8 568 132 28 0 chr5 39052395 39052501 -160577649 + L1MA8 LINE L1 6183 6291 0 458 242 11 0 chr5 39052560 39052655 -160577495 - MIR SINE MIR -86 176 81 400 286 140 12 chr5 39052661 39052832 -160577318 - MIR3 SINE MIR 0 208 16 258 351 36 56 chr5 39053732 39053983 -160576167 - L2 LINE L2 -189 3083 2838 2412 81 3 0 chr5 39054267 39054575 -160575575 + AluSx SINE Alu 1 309 -3 1357 182 40 121 chr5 39056403 39056799 -160573351 - MLT1A1 LTR MaLR -1 364 1 1053 191 9 61 chr5 39057066 39057296 -160572854 + MER20 DNA MER1_type 2 219 0 181 329 0 12 chr5 39057311 39057393 -160572757 + MER5B DNA MER1_type 28 108 -70 288 351 95 24 chr5 39057580 39057748 -160572402 - MIR SINE MIR -35 227 48 2304 84 7 26 chr5 39057752 39058060 -160572090 - AluSg SINE Alu -8 302 1 27 0 0 0 chr5 39058843 39058870 -160571280 + AT_rich Low_complexity Low_complexity 1 27 0 810 256 42 0 chr5 39058926 39059094 -160571056 - MER96 DNA MER1_type 0 175 1 205 297 242 0 chr5 39059094 39059185 -160570965 - L2 LINE L2 -7 3306 3194 334 287 60 48 chr5 39059378 39059643 -160570507 + MLT1L LTR MaLR 237 615 0 299 299 97 29 chr5 39060854 39061117 -160569033 - MLT1L LTR MaLR -227 284 1 860 271 0 0 chr5 39061424 39061623 -160568527 + MER58A DNA MER1_type 26 224 0 307 269 67 42 chr5 39061773 39061929 -160568221 - MIR SINE MIR -67 141 30 1360 278 91 35 chr5 39062869 39063362 -160566788 + LTR33 LTR ERVL 1 521 0 2026 150 0 7 chr5 39063803 39064103 -160566047 - AluJo SINE Alu -12 300 3 484 322 184 43 chr5 39064146 39065990 -160564160 + L2 LINE L2 906 3009 -263 186 296 28 70 chr5 39066072 39066143 -160564007 + L2 LINE L2 3153 3220 -52 387 0 0 0 chr5 39067865 39067908 -160562242 + (CA)n Simple_repeat Simple_repeat 2 44 0 2710 281 97 30 chr5 39068584 39069744 -160560406 + ERVL LTR ERVL 87 1324 -4440 2560 87 43 0 chr5 39069793 39070139 -160560011 + L1PA11 LINE L1 5808 6168 -6 429 257 43 45 chr5 39070234 39070529 -160559621 + MERVL-C1 LTR ERVL 5064 5427 -337 504 171 86 26 chr5 39070574 39070691 -160559459 + MERVL-C1 LTR ERVL 5535 5658 -106 715 194 44 44 chr5 39070704 39070982 -160559168 + MLT2C1 LTR ERVL 27 395 -2 957 279 29 49 chr5 39070989 39071336 -160558814 + L1M4b LINE L1 162 501 -5783 1549 205 92 49 chr5 39071382 39071807 -160558343 - MST-int LTR MaLR 0 1651 1209 340 22 22 0 chr5 39072347 39072392 -160557758 + MADE1 DNA Mariner 1 46 -34 2876 147 6 51 chr5 39072622 39073111 -160557039 - LTR24 LTR ERV1 0 467 1 2141 118 10 0 chr5 39073661 39073958 -160556192 - AluSx SINE Alu -12 300 1 202 311 22 72 chr5 39073959 39074139 -160556011 + MIR3 SINE MIR 36 206 -2 2190 157 48 45 chr5 39075421 39075862 -160554288 - MER65A LTR ERV1 0 445 4 751 218 0 0 chr5 39076332 39076465 -160553685 + FLAM_A SINE Alu 1 133 0 456 263 53 53 chr5 39076763 39076972 -160553178 - L2 LINE L2 0 3313 3105 487 226 57 85 chr5 39077023 39077239 -160552911 + L1MC5 LINE L1 7614 7824 -137 2321 137 117 10 chr5 39077239 39077625 -160552525 - MSTA LTR MaLR -1 427 1 487 226 57 85 chr5 39077625 39077656 -160552494 + L1MC5 LINE L1 7824 7854 -107 2393 59 0 62 chr5 39077675 39077998 -160552152 - AluY SINE Alu -8 303 1 3600 252 106 67 chr5 39078205 39080044 -160550106 - L1MC4 LINE L1 -133 7769 5765 238 319 61 27 chr5 39080036 39080412 -160549738 - L1MC4 LINE L1 -852 5294 4906 * 253 368 109 47 chr5 39080412 39080814 -160549336 - L2 LINE L2 -42 3230 2804 575 305 77 48 chr5 39083406 39083823 -160546327 - L2 LINE L2 0 3313 2885 1568 214 14 103 chr5 39086142 39086735 -160543415 - L1M4 LINE L1 -3293 2853 2314 306 297 9 63 chr5 39087553 39087664 -160542486 + L1M4b LINE L1 540 644 -5740 1038 252 125 34 chr5 39087699 39088241 -160541909 + L1M4b LINE L1 777 1433 -4870 * 1896 240 46 43 chr5 39088232 39088883 -160541267 + L1 LINE L1 4210 4862 -1284 4606 153 88 16 chr5 39088889 39089659 -160540491 - LTR1B LTR ERV1 0 826 1 16908 141 28 36 chr5 39089659 39092445 -160537705 - HUERS-P2 LTR ERV1 0 3088 325 886 171 6 34 chr5 39092448 39092623 -160537527 + L1MB3 LINE L1 6011 6180 -3 387 252 61 0 chr5 39093269 39093384 -160536766 + MER5B DNA MER1_type 1 122 -56 480 266 79 0 chr5 39093623 39093762 -160536388 - MER96 DNA MER1_type? -5 170 21 21 36 0 0 chr5 39094401 39094429 -160535721 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 39094964 39094987 -160535163 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 39095418 39095462 -160534688 + AT_rich Low_complexity Low_complexity 1 44 0 265 232 21 0 chr5 39096310 39096405 -160533745 + (TCCA)n Simple_repeat Simple_repeat 4 100 0 309 352 14 21 chr5 39096867 39097009 -160533141 - MIR SINE MIR -102 160 20 601 263 16 27 chr5 39097157 39097343 -160532807 + LTR52 LTR ERVL 1 184 -237 1519 275 33 31 chr5 39097354 39097809 -160532341 + HERVL74 LTR ERVL 212 667 -2889 2858 263 45 13 chr5 39098056 39098367 -160531783 + HERVL74 LTR ERVL 998 1298 -2279 2455 91 46 70 chr5 39098367 39098589 -160531561 - THE1B LTR MaLR 0 364 153 2255 101 0 10 chr5 39098589 39098885 -160531265 + AluSc SINE Alu 1 293 -16 2455 91 46 70 chr5 39098885 39099035 -160531115 - THE1B LTR MaLR -211 153 1 2858 263 45 13 chr5 39099035 39099792 -160530358 + HERVL74 LTR ERVL 1298 2095 -1482 360 64 0 0 chr5 39099934 39099981 -160530169 + (CA)n Simple_repeat Simple_repeat 2 48 0 1504 266 51 72 chr5 39099986 39100615 -160529535 + L1M4b LINE L1 113 728 -6131 1711 180 6 49 chr5 39100626 39100976 -160529174 + MLT2C1 LTR ERVL 4 338 -59 360 0 0 0 chr5 39100977 39101017 -160529133 + (TG)n Simple_repeat Simple_repeat 2 41 0 1490 268 94 9 chr5 39101174 39101630 -160528520 + ERVL-C1 LTR ERVL 211 705 -5059 3102 256 73 11 chr5 39101709 39103392 -160526758 + ERVL-C1 LTR ERVL 880 2769 -2995 5766 195 10 16 chr5 39103393 39104151 -160525999 + ERVL-C1 LTR ERVL 3887 4635 -1129 1184 40 7 14 chr5 39104151 39104168 -160525982 - L1PA5 LINE L1 0 6154 6138 181 77 0 0 chr5 39104168 39104194 -160525956 + (TTTA)n Simple_repeat Simple_repeat 3 168 0 1184 40 7 14 chr5 39104194 39104324 -160525826 - L1PA5 LINE L1 -16 6138 6008 5766 195 10 16 chr5 39104324 39104847 -160525303 + ERVL-C1 LTR ERVL 4635 5160 -604 496 197 96 50 chr5 39104847 39105040 -160525110 + L1M3 LINE L1 5465 5661 -512 1771 185 20 0 chr5 39105040 39105343 -160524807 + AluJo SINE Alu 1 309 -3 496 197 96 50 chr5 39105343 39105356 -160524794 + L1M3 LINE L1 5661 5672 -501 951 100 17 22 chr5 39105356 39105408 -160524742 + (GAAA)n Simple_repeat Simple_repeat 1 230 0 951 100 17 22 chr5 39105408 39105588 -160524562 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 1182 225 47 63 chr5 39105656 39105843 -160524307 + L1ME1 LINE L1 5678 5866 -300 2325 167 64 17 chr5 39105843 39106250 -160523900 + MSTB LTR MaLR 1 426 0 1182 225 47 63 chr5 39106250 39106507 -160523643 + L1ME1 LINE L1 5866 6115 -51 2021 131 3 3 chr5 39106517 39106808 -160523342 - AluSx SINE Alu -10 302 12 2069 132 73 51 chr5 39106810 39107166 -160522984 - THE1B LTR MaLR 0 364 1 3525 109 2 0 chr5 39107166 39107645 -160522505 - THE1B-int LTR MaLR 0 1580 1101 3988 83 59 16 chr5 39107647 39108223 -160521927 - THE1B-int LTR MaLR -979 601 1 2254 121 72 26 chr5 39108223 39108571 -160521579 - THE1B LTR MaLR 0 364 1 557 309 193 15 chr5 39108683 39109088 -160521062 + L1MEc LINE L1 49 525 -5871 1000 144 13 0 chr5 39109675 39109828 -160520322 + L1MA4 LINE L1 5 159 -5169 8047 153 33 29 chr5 39109831 39111253 -160518897 + MSTA-int LTR MaLR 153 1580 0 1962 185 123 5 chr5 39111253 39111636 -160518514 + MSTA LTR MaLR 1 428 0 5414 183 16 14 chr5 39111636 39112782 -160517368 + L1MA4 LINE L1 3424 4571 -1757 278 291 40 53 chr5 39112892 39112953 -160517197 + MIR SINE MIR 103 163 -99 2166 133 0 0 chr5 39112953 39113253 -160516897 - AluSx SINE Alu -12 300 1 278 291 40 53 chr5 39113253 39113342 -160516808 + MIR SINE MIR 163 251 -11 5172 177 43 7 chr5 39113548 39115448 -160514702 + L1MA4 LINE L1 4527 6476 -6 324 337 30 0 chr5 39116237 39116338 -160513812 + MIR SINE MIR 37 140 -68 2124 38 0 30 chr5 39118330 39118597 -160511553 + AluY SINE Alu 49 307 -4 323 265 43 43 chr5 39118695 39118812 -160511338 + MIR3 SINE MIR 85 201 -7 243 103 0 0 chr5 39120776 39120821 -160509329 + (CA)n Simple_repeat Simple_repeat 1 84 0 243 103 0 0 chr5 39120821 39120860 -160509290 + (CA)n Simple_repeat Simple_repeat 1 39 0 1343 175 129 10 chr5 39121298 39121607 -160508543 + MER4A LTR ERV1 1 346 -318 624 173 251 62 chr5 39121632 39121663 -160508487 + MER4C LTR ERV1 159 183 -282 2416 75 0 0 chr5 39121663 39121955 -160508195 + AluSc SINE Alu 1 292 -17 624 173 251 62 chr5 39121955 39122166 -160507984 + MER4C LTR ERV1 183 447 -18 1339 179 146 94 chr5 39122187 39122386 -160507764 + MER4C-int LTR ERV1 1 188 -6410 243 0 0 0 chr5 39122386 39122413 -160507737 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1339 179 146 94 chr5 39122413 39122810 -160507340 + MER4C-int LTR ERV1 188 628 -5970 365 635 0 6 chr5 39122814 39122970 -160507180 + (TG)n Simple_repeat Simple_repeat 2 156 0 269 305 39 49 chr5 39124019 39124222 -160505928 + MER4C-int LTR ERV1 1235 1435 -5366 387 312 43 34 chr5 39125682 39126008 -160504142 + MER110-int LTR ERV1 2549 2634 -4167 2168 105 3 7 chr5 39126030 39126325 -160503825 - AluSg SINE Alu -16 294 1 295 363 40 27 chr5 39126496 39126972 -160503178 + MER110-int LTR ERV1 3160 3641 -3481 355 309 109 78 chr5 39127015 39127474 -160502676 + MER110-int LTR ERV1 3381 3853 -2948 2352 77 0 3 chr5 39127509 39127808 -160502342 + AluY SINE Alu 1 298 -13 367 294 47 47 chr5 39128379 39128549 -160501601 + MER110-int LTR ERV1 2137 2306 -2341 183 231 0 77 chr5 39128557 39128622 -160501528 + L2 LINE L2 2527 2586 -728 392 301 65 75 chr5 39128634 39129113 -160501037 + MER110-int LTR ERV1 2390 2863 -1784 1107 319 52 36 chr5 39129470 39130257 -160499893 + MER110-int LTR ERV1 5633 6432 -690 900 302 8 8 chr5 39130372 39130640 -160499510 - PABL_B-int LTR ERV1 -439 6683 6416 330 87 0 0 chr5 39130689 39130735 -160499415 + (TG)n Simple_repeat Simple_repeat 2 47 0 1791 170 0 0 chr5 39130736 39131018 -160499132 - AluJb SINE Alu -26 286 5 35 54 0 0 chr5 39131022 39131078 -160499072 + AT_rich Low_complexity Low_complexity 1 56 0 1687 152 42 18 chr5 39131124 39131407 -160498743 - AluSx SINE Alu -22 290 1 330 312 114 57 chr5 39131458 39131775 -160498375 - L1MEc LINE L1 -4630 1754 1420 233 224 9 75 chr5 39131783 39131890 -160498260 - L1MEc LINE L1 -5037 1526 1427 228 254 0 0 chr5 39131922 39131981 -160498169 + T-rich Low_complexity Low_complexity 1 59 0 2105 133 54 101 chr5 39132372 39133043 -160497107 + MER4E LTR ERV1 1 759 -7 1156 267 157 33 chr5 39133239 39133845 -160496305 - LTR50 LTR ERVL -111 684 4 2078 175 85 15 chr5 39133905 39134305 -160495845 - MSTA LTR MaLR 0 428 1 8145 198 34 9 chr5 39134305 39134391 -160495759 - MSTA-int LTR MaLR 0 1651 1569 5178 60 51 0 chr5 39134391 39135019 -160495131 - PABL_A LTR ERV1 0 660 1 8145 198 34 9 chr5 39135019 39136538 -160493612 - MSTA-int LTR MaLR -82 1569 5 1794 183 0 0 chr5 39136540 39136825 -160493325 - AluSx SINE Alu -23 289 5 1854 179 117 8 chr5 39136850 39137225 -160492925 - MSTA LTR MaLR -12 416 1 7021 228 68 43 chr5 39137225 39138837 -160491313 - MSTA-int LTR MaLR 0 1651 1 1972 179 79 55 chr5 39138837 39138878 -160491272 - MSTA LTR MaLR 0 428 389 2077 130 0 31 chr5 39138878 39139200 -160490950 + AluSx SINE Alu 1 312 0 1972 179 79 55 chr5 39139200 39139576 -160490574 - MSTA LTR MaLR -39 389 1 1695 157 118 21 chr5 39140028 39140366 -160489784 + THE1C LTR MaLR 1 371 -4 279 257 0 14 chr5 39140485 39140555 -160489595 + MLT1E1 LTR MaLR 5 73 -581 2694 102 42 49 chr5 39140555 39140986 -160489164 + MSTA LTR MaLR 1 428 0 631 164 109 0 chr5 39140986 39141114 -160489036 + MSTA-int LTR MaLR 1 142 -1509 1973 135 47 75 chr5 39141114 39141500 -160488650 + THE1C LTR MaLR 1 375 0 9511 158 37 7 chr5 39141501 39143034 -160487116 + THE1C-int LTR MaLR 2 1580 0 1595 154 63 83 chr5 39143034 39143419 -160486731 + THE1C LTR MaLR 1 390 -38 2128 127 3 13 chr5 39143419 39143734 -160486416 - AluSx SINE Alu 0 312 1 1595 154 63 83 chr5 39143734 39143773 -160486377 + THE1C LTR MaLR 390 428 0 7599 195 43 16 chr5 39143773 39145247 -160484903 + MSTA-int LTR MaLR 138 1651 0 2280 174 38 21 chr5 39145247 39145666 -160484484 + MSTA LTR MaLR 1 426 -2 1980 227 92 53 chr5 39145669 39146232 -160483918 + MLT1E1 LTR MaLR 70 654 0 472 333 104 4 chr5 39146402 39146633 -160483517 + L1MEd LINE L1 121 374 -6022 1181 187 57 66 chr5 39147177 39147509 -160482641 - L1MC4 LINE L1 -715 7327 6999 * 9302 168 15 21 chr5 39147498 39148150 -160482000 - L1PB1 LINE L1 0 6867 6212 2247 91 28 0 chr5 39148150 39148436 -160481714 + AluSc SINE Alu 1 294 -15 9302 168 15 21 chr5 39148436 39148479 -160481671 - L1PB1 LINE L1 -655 6212 6170 1966 135 3 0 chr5 39148479 39148811 -160481339 - AluSx SINE Alu 0 333 1 9302 168 15 21 chr5 39148811 39150984 -160479166 - L1PB1 LINE L1 -697 6170 4012 2054 101 102 46 chr5 39150986 39151400 -160478750 - LTR14B LTR ERVK 0 608 1 5774 175 66 2 chr5 39151404 39152701 -160477449 - L1PB1 LINE L1 -2848 4014 2634 2784 122 18 0 chr5 39152700 39153214 -160476936 + L1PBa LINE L1 997 1704 -5159 * 2256 106 0 16 chr5 39153799 39154111 -160476039 + AluSx SINE Alu 1 307 -5 209 253 76 38 chr5 39154239 39154318 -160475832 + L2 LINE L2 2412 2493 -821 2038 144 33 36 chr5 39157406 39157768 -160472382 + THE1C LTR MaLR 14 374 -1 792 258 89 59 chr5 39158088 39158682 -160471468 + L1MEd LINE L1 678 1289 -4916 319 302 39 0 chr5 39158926 39159055 -160471095 + LTR67 LTR ERVL 403 536 -21 519 280 7 7 chr5 39159150 39159293 -160470857 + L2 LINE L2 3171 3313 0 298 284 74 0 chr5 39159963 39160044 -160470106 + L2 LINE L2 3186 3272 0 664 188 62 45 chr5 39161727 39161854 -160468296 + L1MB4 LINE L1 6000 6132 -48 1812 140 0 58 chr5 39161854 39162162 -160467988 + AluSx SINE Alu 1 290 -22 664 188 62 45 chr5 39162162 39162210 -160467940 + L1MB4 LINE L1 6132 6178 -2 10280 32 0 1 chr5 39162225 39164151 -160465999 - L1PA3 LINE L1 -5 6150 4229 272 175 0 0 chr5 39164254 39164294 -160465856 - MER2 DNA MER2_type -305 40 1 811 270 104 50 chr5 39164306 39164336 -160465814 + MLT1J1 LTR MaLR 2 29 -417 2186 119 3 7 chr5 39164336 39164638 -160465512 - AluSq SINE Alu -12 301 1 811 270 104 50 chr5 39164638 39165029 -160465121 + MLT1J1 LTR MaLR 29 446 0 730 278 64 4 chr5 39166196 39166430 -160463720 - LTR16A LTR ERVL 0 450 203 263 224 17 0 chr5 39166466 39166524 -160463626 - LTR16A1 LTR ERVL -336 121 63 310 303 40 36 chr5 39168131 39168309 -160461841 + MIR SINE MIR 14 193 -63 749 276 33 16 chr5 39168833 39169076 -160461074 - MIR SINE MIR -8 254 8 2213 94 3 3 chr5 39169813 39170101 -160460049 - AluSx SINE Alu -18 294 7 1052 247 120 44 chr5 39174413 39174895 -160455255 - LTR33A LTR ERVL -4 519 1 389 256 111 26 chr5 39175575 39175692 -160454458 + L2 LINE L2 3187 3313 0 190 215 13 101 chr5 39175879 39175899 -160454251 + MER5A DNA MER1_type 1 13 -176 312 262 221 14 chr5 39175899 39176044 -160454106 - MER5B DNA MER1_type -3 175 1 1908 203 3 14 chr5 39176672 39177017 -160453133 + MER58B DNA MER1_type 1 341 0 667 282 73 54 chr5 39177190 39177668 -160452482 - LTR33 LTR ERVL -6 515 29 1203 173 106 4 chr5 39178120 39178357 -160451793 + MER2 DNA MER2_type 83 343 -2 6464 180 88 13 chr5 39181524 39182966 -160447184 - Looper DNA T2_type -1 1557 8 1042 122 13 0 chr5 39183038 39183194 -160446956 + L1MB3 LINE L1 6026 6183 0 228 279 90 57 chr5 39183548 39183670 -160446480 - L2 LINE L2 -21 3251 3167 526 340 46 17 chr5 39184054 39184292 -160445858 + MIR SINE MIR 12 256 -6 2228 158 48 5 chr5 39184805 39185179 -160444971 + MLT1B LTR MaLR 1 390 0 378 233 121 17 chr5 39185568 39185684 -160444466 + MIR SINE MIR 71 198 -64 234 0 0 0 chr5 39186861 39186887 -160443263 + (TG)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr5 39187013 39187041 -160443109 + AT_rich Low_complexity Low_complexity 1 28 0 1476 263 11 3 chr5 39189554 39189923 -160440227 - LTR16A LTR ERVL -60 390 19 4285 271 64 34 chr5 39190376 39190752 -160439398 - HERV16 LTR ERVL -3507 1489 1126 867 222 88 5 chr5 39190752 39190946 -160439204 - MER58C DNA MER1_type -3 212 3 4285 271 64 34 chr5 39190946 39191984 -160438166 - HERV16 LTR ERVL -3870 1126 33 736 295 51 5 chr5 39192011 39192228 -160437922 - LTR16A LTR ERVL -18 432 206 1431 100 10 69 chr5 39192235 39192526 -160437624 - L1PA6 LINE L1 -2 6152 5879 24425 47 9 3 chr5 39193077 39196741 -160433409 + L1PA4 LINE L1 2279 5958 -197 7284 232 24 41 chr5 39196853 39198013 -160432137 + L1 LINE L1 2358 3468 -2678 1630 196 0 0 chr5 39198013 39198288 -160431862 + AluJb SINE Alu 1 275 -37 7284 232 24 41 chr5 39198288 39199187 -160430963 + L1 LINE L1 3468 4381 -1765 605 100 0 0 chr5 39199200 39199280 -160430870 + L1MA3 LINE L1 6222 6301 -4 2416 75 0 0 chr5 39199307 39199599 -160430551 + AluSc SINE Alu 1 292 -17 628 172 276 27 chr5 39199599 39199810 -160430340 + MER4C LTR ERV1 178 447 -18 1374 174 147 100 chr5 39199831 39200030 -160430120 + MER4C-int LTR ERV1 1 189 -6409 243 0 0 0 chr5 39200030 39200057 -160430093 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1374 174 147 100 chr5 39200057 39200459 -160429691 + MER4C-int LTR ERV1 189 636 -5962 268 23 0 47 chr5 39200459 39200502 -160429648 + (TG)n Simple_repeat Simple_repeat 2 42 0 1374 174 147 100 chr5 39200502 39200537 -160429613 + MER4C-int LTR ERV1 636 668 -5930 1594 110 12 41 chr5 39201590 39201836 -160428314 - MER1B DNA MER1_type 0 339 101 250 179 0 0 chr5 39201841 39201880 -160428270 - MER1B DNA MER1_type -298 39 1 24 0 0 0 chr5 39202792 39202816 -160427334 + AT_rich Low_complexity Low_complexity 1 24 0 422 274 40 8 chr5 39203631 39203755 -160426395 + MIR SINE MIR 62 189 -73 183 293 0 0 chr5 39204240 39204281 -160425869 + L2 LINE L2 3224 3264 -8 861 178 0 0 chr5 39204649 39204778 -160425372 + FLAM_A SINE Alu 2 130 -3 355 303 58 110 chr5 39205495 39205977 -160424173 + L2 LINE L2 2856 3312 -1 361 246 53 0 chr5 39208195 39208309 -160421841 + MER103 DNA DNA 44 163 -3 319 275 92 0 chr5 39208494 39208603 -160421547 + MIR3 SINE MIR 59 177 -31 767 268 33 24 chr5 39211132 39211345 -160418805 - MIR SINE MIR -41 221 7 200 257 97 18 chr5 39212169 39212282 -160417868 - MIR SINE MIR -129 133 12 189 0 0 0 chr5 39212431 39212452 -160417698 + (A)n Simple_repeat Simple_repeat 1 21 0 246 247 14 27 chr5 39213255 39213328 -160416822 + MER5A DNA MER1_type 44 115 -74 209 333 0 0 chr5 39213312 39213363 -160416787 - MER5B DNA MER1_type -127 51 1 * 225 0 0 0 chr5 39214079 39214104 -160416046 + (TG)n Simple_repeat Simple_repeat 1 25 0 307 284 20 39 chr5 39214702 39214804 -160415346 + L1MC4a LINE L1 5974 6073 -1735 256 295 0 2 chr5 39215084 39215182 -160414968 + L1MC4 LINE L1 6431 6539 -1281 780 232 63 14 chr5 39215187 39215472 -160414678 - L1MC4 LINE L1 -828 7214 6916 303 130 0 0 chr5 39215613 39215667 -160414483 + (TG)n Simple_repeat Simple_repeat 2 55 0 305 243 104 60 chr5 39215689 39215957 -160414193 + L1MC4 LINE L1 7703 7982 -60 2219 134 0 0 chr5 39217017 39217324 -160412826 + AluSp SINE Alu 1 307 -6 312 279 101 101 chr5 39218651 39218794 -160411356 - L2 LINE L2 0 3272 3127 261 0 0 0 chr5 39218794 39218823 -160411327 + (TG)n Simple_repeat Simple_repeat 1 29 0 312 279 101 101 chr5 39218823 39218916 -160411234 - L2 LINE L2 -144 3128 3036 286 255 75 43 chr5 39220498 39220592 -160409558 - MIR SINE MIR -116 146 50 362 268 313 17 chr5 39221455 39221634 -160408516 + MIR SINE MIR 15 246 -16 195 189 27 0 chr5 39224027 39224064 -160406086 + MIR SINE MIR 108 145 -63 2625 113 9 64 chr5 39224441 39224849 -160405301 + MSTA LTR MaLR 1 383 -45 1598 210 30 3 chr5 39224849 39225027 -160405123 - AluJb SINE Alu 0 312 121 180 0 0 0 chr5 39225027 39225047 -160405103 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 1598 210 30 3 chr5 39225047 39225168 -160404982 - AluJb SINE Alu -191 121 5 2625 113 9 64 chr5 39225168 39225212 -160404938 + MSTA LTR MaLR 383 428 0 249 325 43 0 chr5 39225616 39225779 -160404371 + MER102b DNA MER1_type 164 333 -8 2453 57 0 0 chr5 39225969 39226270 -160403880 - AluY SINE Alu -6 305 5 1247 91 0 0 chr5 39227349 39227514 -160402636 + AluY SINE Alu 144 308 -3 7002 48 17 43 chr5 39228397 39229486 -160400664 - L1PA7 LINE L1 -1 6153 5066 2647 86 0 20 chr5 39229799 39229930 -160400220 - L1PA7 LINE L1 -1309 4837 4705 2514 69 3 0 chr5 39229930 39230233 -160399917 - AluY SINE Alu -7 304 1 2647 86 0 20 chr5 39230233 39230507 -160399643 - L1PA7 LINE L1 -1441 4705 4440 * 6500 92 4 14 chr5 39230506 39231488 -160398662 + L1P LINE L1 1730 2701 -3445 9188 129 26 18 chr5 39231864 39232418 -160397732 - L1M1 LINE L1 -4872 2693 2145 1755 148 16 30 chr5 39232418 39232723 -160397427 - AluJb SINE Alu -11 301 1 9188 129 26 18 chr5 39232723 39233744 -160396406 - L1M1 LINE L1 -5420 2145 1105 710 130 35 0 chr5 39233742 39233857 -160396293 - L1M1 LINE L1 -7431 134 16 * 190 351 54 60 chr5 39235145 39235313 -160394837 + L2 LINE L2 2856 3022 -250 240 35 0 0 chr5 39236209 39236238 -160393912 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 946 152 0 0 chr5 39236255 39236393 -160393757 - AluJb SINE Alu -171 141 4 41 72 0 0 chr5 39237403 39237486 -160392664 + AT_rich Low_complexity Low_complexity 1 83 0 256 159 0 0 chr5 39237721 39237765 -160392385 - MIR SINE MIR -148 114 71 36 70 0 0 chr5 39238129 39238200 -160391950 + AT_rich Low_complexity Low_complexity 1 71 0 1731 148 86 12 chr5 39239156 39239480 -160390670 - MER7A DNA MER2_type 0 346 1 21 36 0 0 chr5 39239745 39239773 -160390377 + AT_rich Low_complexity Low_complexity 1 28 0 367 229 118 49 chr5 39239898 39240042 -160390108 - L2 LINE L2 -1 3312 3159 * 1187 253 164 35 chr5 39240022 39240564 -160389586 - L2 LINE L2 -992 2322 1711 2191 47 8 0 chr5 39240603 39240856 -160389294 + AluSc SINE Alu 1 255 -54 892 40 0 0 chr5 39240857 39240958 -160389192 + AluSc SINE Alu 155 255 -54 1103 84 14 0 chr5 39240959 39241177 -160388973 + AluSc SINE Alu 155 374 0 224 258 172 25 chr5 39241249 39241412 -160388738 - L2 LINE L2 -1805 1509 1323 8579 98 26 14 chr5 39241532 39242549 -160387601 + L1MA3 LINE L1 2133 3176 -4389 3460 31 2 2 chr5 39242549 39242968 -160387182 + L1PA4 LINE L1 5734 6152 -3 8579 98 26 14 chr5 39242968 39243425 -160386725 + L1MA3 LINE L1 3176 3626 -3939 * 9318 171 23 45 chr5 39243411 39245546 -160384604 + L1MA3 LINE L1 4709 6797 -768 583 161 124 0 chr5 39245559 39245696 -160384454 - L1 LINE L1 -1678 4468 4315 3460 90 108 12 chr5 39245697 39246385 -160383765 + L1MA3 LINE L1 6819 7613 -111 25 83 0 0 chr5 39246912 39246972 -160383178 + AT_rich Low_complexity Low_complexity 1 60 0 210 71 0 0 chr5 39247164 39247192 -160382958 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 314 286 68 61 chr5 39247219 39247239 -160382911 - L2 LINE L2 -209 3063 3045 2391 131 98 14 chr5 39247239 39247668 -160382482 + MLT1C LTR MaLR 1 465 -2 314 286 68 61 chr5 39247668 39247794 -160382356 - L2 LINE L2 -227 3045 2916 782 185 40 0 chr5 39247860 39248011 -160382139 + MER58B DNA MER1_type 185 341 0 642 227 77 31 chr5 39248026 39248220 -160381930 + MIR SINE MIR 60 262 0 206 335 144 46 chr5 39248304 39248498 -160381652 - L2 LINE L2 -400 2914 2702 393 282 0 0 chr5 39248825 39248928 -160381222 + MER94 DNA DNA 1 103 -31 484 300 111 62 chr5 39250591 39251058 -160379092 - L2 LINE L2 -887 2427 1938 1108 223 54 26 chr5 39251175 39251561 -160378589 + L1ME3 LINE L1 5765 6161 -1 7691 168 122 23 chr5 39251750 39253347 -160376803 + MER52A LTR ERV1 1 1755 0 329 312 33 107 chr5 39253402 39253739 -160376411 - L2 LINE L2 -1839 1475 1164 197 214 48 71 chr5 39253743 39253827 -160376323 - L2 LINE L2 -976 2338 2257 21 36 0 0 chr5 39255154 39255182 -160374968 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 39255318 39255340 -160374810 + AT_rich Low_complexity Low_complexity 1 22 0 2509 68 0 3 chr5 39255560 39255871 -160374279 - AluY SINE Alu -1 310 1 2158 122 0 3 chr5 39257252 39257555 -160372595 + AluSq SINE Alu 6 307 -6 539 302 44 28 chr5 39257790 39258038 -160372112 + L2 LINE L2 3061 3312 -1 729 140 9 0 chr5 39258257 39258371 -160371779 - AluJb SINE Alu -197 115 1 247 242 11 11 chr5 39258622 39258713 -160371437 + L1ME LINE L1 5766 5856 -265 1186 243 39 41 chr5 39259011 39259237 -160370913 - MLT1E2 LTR MaLR 0 626 400 1551 185 3 25 chr5 39259237 39259523 -160370627 - AluJo SINE Alu -32 280 1 1186 243 39 41 chr5 39259523 39259634 -160370516 - MLT1E2 LTR MaLR -226 400 290 519 105 19 57 chr5 39259647 39259752 -160370398 - L1MA9 LINE L1 -36 6276 6176 525 44 0 0 chr5 39259765 39259833 -160370317 + (TG)n Simple_repeat Simple_repeat 1 68 0 265 242 0 45 chr5 39259940 39260006 -160370144 - MLT1E2 LTR MaLR -563 63 1 234 91 0 0 chr5 39260202 39260235 -160369915 + (ATG)n Simple_repeat Simple_repeat 2 34 0 718 246 62 11 chr5 39261045 39261305 -160368845 + L1MCc LINE L1 31 303 -6120 586 307 50 29 chr5 39261389 39261630 -160368520 - MIR SINE MIR -3 259 14 585 222 167 0 chr5 39261973 39262135 -160368015 - L2 LINE L2 0 3313 3125 533 261 121 10 chr5 39262252 39262459 -160367691 - MLT1J LTR MaLR -77 434 205 2282 100 3 3 chr5 39262471 39262771 -160367379 + AluSp SINE Alu 1 300 -13 285 29 0 0 chr5 39266060 39266094 -160364056 + (TA)n Simple_repeat Simple_repeat 2 35 0 1598 261 37 29 chr5 39266788 39267376 -160362774 - L2 LINE L2 -3 3310 2639 1689 143 24 44 chr5 39267394 39267687 -160362463 - AluJo SINE Alu -25 287 1 231 228 18 18 chr5 39267705 39267762 -160362388 - L2 LINE L2 -750 2564 2508 209 171 0 0 chr5 39267932 39267967 -160362183 + (TTGG)n Simple_repeat Simple_repeat 3 37 0 593 104 31 0 chr5 39267967 39268063 -160362087 + U6 snRNA snRNA 2 100 -7 644 253 103 15 chr5 39268173 39268378 -160361772 + MIR SINE MIR 16 236 -26 199 319 124 44 chr5 39269634 39269747 -160360403 - MER5A DNA MER1_type -11 178 57 546 201 158 22 chr5 39269786 39269970 -160360180 + MER112 DNA MER1_type 34 242 -18 383 210 180 10 chr5 39270042 39270142 -160360008 - L2 LINE L2 0 3313 3197 342 232 72 0 chr5 39271575 39271644 -160358506 + MIR SINE MIR 20 93 -169 260 207 52 0 chr5 39271875 39271933 -160358217 - L2 LINE L2 -4 3309 3249 256 283 0 0 chr5 39271975 39272035 -160358115 - L2 LINE L2 -262 3051 2992 932 272 42 0 chr5 39272412 39272695 -160357455 + LTR16C LTR ERVL 191 485 -6 505 296 65 15 chr5 39272855 39273054 -160357096 - MIR SINE MIR -26 236 28 283 331 73 68 chr5 39273190 39273438 -160356712 + L2 LINE L2 3022 3270 -2 475 322 106 49 chr5 39273839 39274103 -160356047 + L2 LINE L2 2994 3272 0 225 268 14 42 chr5 39274579 39274650 -160355500 + L2 LINE L2 3184 3252 -20 1140 247 149 18 chr5 39274904 39275523 -160354627 + L2 LINE L2 2630 3313 0 2392 78 31 65 chr5 39275587 39275973 -160354177 - THE1C LTR MaLR -2 373 1 404 276 49 0 chr5 39276964 39277087 -160353063 + MIR SINE MIR 22 150 -112 954 207 80 4 chr5 39277652 39277903 -160352247 - L1MA9 LINE L1 -38 6274 6005 350 276 238 9 chr5 39277939 39278149 -160352001 - MIR SINE MIR 0 262 5 254 345 136 22 chr5 39280130 39280453 -160349697 + L2 LINE L2 2004 2394 -920 2074 121 10 7 chr5 39280453 39280759 -160349391 - AluSg SINE Alu -3 307 1 254 345 136 22 chr5 39280759 39280884 -160349266 + L2 LINE L2 2394 2503 -811 292 221 35 70 chr5 39281439 39281525 -160348625 - L2 LINE L2 0 3272 3190 2331 110 0 0 chr5 39282004 39282304 -160347846 + AluSq SINE Alu 1 300 -13 666 264 64 24 chr5 39282489 39282739 -160347411 - MIR SINE MIR 0 262 3 282 272 65 0 chr5 39282933 39283025 -160347125 - MIR SINE MIR -49 213 116 287 266 117 0 chr5 39284688 39284782 -160345368 - MIR SINE MIR -111 151 47 526 260 102 10 chr5 39284910 39285106 -160345044 + MER20 DNA MER1_type 2 215 -4 356 277 101 13 chr5 39286073 39286270 -160343880 - L1ME LINE L1 -370 5751 5533 967 252 27 0 chr5 39286713 39286935 -160343215 + MIR SINE MIR 33 260 -2 182 296 37 37 chr5 39287021 39287102 -160343048 + MIR3 SINE MIR 104 184 -24 1492 266 177 19 chr5 39287365 39288273 -160341877 - L2 LINE L2 -6 3307 2258 280 221 13 13 chr5 39288398 39288475 -160341675 - L1ME4a LINE L1 -81 6040 5964 34 24 0 0 chr5 39289276 39289317 -160340833 + AT_rich Low_complexity Low_complexity 1 41 0 292 288 0 0 chr5 39289702 39289782 -160340368 - L1M4 LINE L1 -1998 4148 4069 310 279 12 47 chr5 39290670 39290756 -160339394 - MIR SINE MIR -85 123 41 203 311 48 29 chr5 39293503 39293606 -160336544 - L2 LINE L2 -558 2756 2652 2523 57 0 3 chr5 39296115 39296415 -160333735 - AluY SINE Alu -12 299 1 21 57 0 0 chr5 39296508 39296543 -160333607 + AT_rich Low_complexity Low_complexity 1 35 0 27764 49 9 1 chr5 39297112 39301613 -160328537 - L1PA5 LINE L1 -2 6152 1621 377 271 85 25 chr5 39301835 39301953 -160328197 - L2 LINE L2 -1 3312 3188 2231 96 13 7 chr5 39302288 39302590 -160327560 - AluSg SINE Alu -6 304 1 826 199 70 11 chr5 39304424 39304610 -160325540 - MER20 DNA MER1_type -17 202 6 572 239 208 23 chr5 39304619 39305095 -160325055 + L1MC5 LINE L1 7332 7895 -66 20270 76 7 0 chr5 39305435 39308250 -160321900 + L1P LINE L1 11 2844 -3302 457 196 116 87 chr5 39308380 39308553 -160321597 - MLT1F LTR MaLR -364 178 1 1159 191 17 9 chr5 39308674 39308905 -160321245 + MLT1F1 LTR MaLR 333 565 -2 281 254 141 7 chr5 39309402 39309544 -160320606 - L2 LINE L2 -2 3311 3151 325 242 84 11 chr5 39310379 39310474 -160319676 - L2 LINE L2 -423 2891 2790 390 196 43 33 chr5 39310477 39310569 -160319581 + MER81 DNA DNA 1 93 -21 5184 66 0 0 chr5 39311363 39312013 -160318137 + L1PA6 LINE L1 5494 6143 -11 22 35 0 0 chr5 39312013 39312042 -160318108 + AT_rich Low_complexity Low_complexity 1 29 0 257 322 178 41 chr5 39312123 39312517 -160317633 - L2 LINE L2 -723 2591 2144 6071 127 41 13 chr5 39313106 39314323 -160315827 - L1MA4A LINE L1 -13 6290 5045 232 237 140 0 chr5 39314318 39314411 -160315739 - HAL1 LINE L1 -1194 1313 1208 * 22 56 0 0 chr5 39315982 39316018 -160314132 + AT_rich Low_complexity Low_complexity 1 36 0 1618 229 66 92 chr5 39317059 39318202 -160311948 - L1ME3A LINE L1 -5 6165 5050 835 87 0 0 chr5 39319905 39320009 -160310141 + AluSx SINE Alu 1 104 -209 1607 87 0 0 chr5 39320035 39320243 -160309907 - MER11B LTR ERVK -1023 213 6 1411 109 5 5 chr5 39320243 39320444 -160309706 + AluSx SINE Alu 93 293 -17 251 200 200 0 chr5 39320460 39320530 -160309620 - MER103 DNA DNA -71 95 12 1606 228 102 54 chr5 39321671 39322188 -160307962 + MLT1F LTR MaLR 1 542 0 2284 89 7 0 chr5 39323066 39323357 -160306793 - AluSq SINE Alu -20 293 1 737 262 94 12 chr5 39323473 39323717 -160306433 + MLT1J2 LTR MaLR 55 318 -132 1146 147 5 5 chr5 39323816 39324000 -160306150 - MER2 DNA MER2_type -155 190 7 308 302 176 11 chr5 39324364 39324546 -160305604 + L2 LINE L2 2534 2745 -569 305 262 233 0 chr5 39324891 39324994 -160305156 + L2 LINE L2 3182 3308 -5 207 0 0 0 chr5 39326337 39326360 -160303790 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 358 361 119 23 chr5 39327034 39327607 -160302543 + L2 LINE L2 2002 2629 -685 25 0 0 0 chr5 39328030 39328055 -160302095 + AT_rich Low_complexity Low_complexity 1 25 0 604 239 40 40 chr5 39329027 39329203 -160300947 - L2 LINE L2 -974 2340 2165 1675 183 3 23 chr5 39329873 39330174 -160299976 + AluJb SINE Alu 2 296 -16 650 241 0 0 chr5 39330232 39330365 -160299785 + FLAM_A SINE Alu 1 133 0 1004 50 0 36 chr5 39330830 39330969 -160299181 + AluY SINE Alu 178 311 0 29 28 0 0 chr5 39331114 39331150 -160299000 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 39331596 39331618 -160298532 + AT_rich Low_complexity Low_complexity 1 22 0 275 210 258 16 chr5 39332874 39332998 -160297152 + MER20 DNA MER1_type 66 219 0 1502 198 42 15 chr5 39334372 39334772 -160295378 - L1M4 LINE L1 -841 5305 4895 1595 225 11 14 chr5 39334773 39335128 -160295022 + MLT1A1 LTR MaLR 1 354 -11 3585 194 20 59 chr5 39335128 39336110 -160294040 - L1M4 LINE L1 -1249 4897 3954 293 336 0 0 chr5 39336131 39336277 -160293873 - L1MEc LINE L1 -4844 1552 1407 974 257 73 38 chr5 39336287 39336820 -160293330 - L1MEc LINE L1 -5062 1334 783 3152 83 2 0 chr5 39336836 39337256 -160292894 - L1PA10 LINE L1 -2 6166 5746 2061 114 59 0 chr5 39337258 39337564 -160292586 + L1P4 LINE L1 5332 5655 -513 2434 261 67 13 chr5 39337566 39337622 -160292528 - L1MEc LINE L1 -5602 794 743 2684 105 5 0 chr5 39337622 39337995 -160292155 - THE1C LTR MaLR 0 375 1 2434 261 67 13 chr5 39337995 39338650 -160291500 - L1MEc LINE L1 -5653 743 44 392 161 0 11 chr5 39338704 39338791 -160291359 + GA-rich Low_complexity Low_complexity 4 89 0 21 0 0 0 chr5 39338891 39338912 -160291238 + AT_rich Low_complexity Low_complexity 1 21 0 254 273 20 10 chr5 39339082 39339181 -160290969 + L1MCa LINE L1 1470 1569 -4857 294 231 192 0 chr5 39339266 39339344 -160290806 + L2 LINE L2 3180 3272 0 392 322 46 35 chr5 39339672 39339846 -160290304 - MER5B DNA MER1_type -2 176 1 1334 199 125 20 chr5 39340493 39340894 -160289256 - Zaphod DNA AcHobo 0 4031 3589 536 156 325 28 chr5 39340862 39341188 -160288962 - Zaphod DNA AcHobo -3022 1009 587 * 985 257 113 19 chr5 39341198 39341509 -160288641 - Zaphod DNA AcHobo -3691 340 1 294 70 0 127 chr5 39342358 39342429 -160287721 - L1MA2 LINE L1 0 6305 6244 592 155 15 110 chr5 39343771 39343867 -160286283 - Charlie5 DNA MER1_type 0 2624 2555 2187 96 10 7 chr5 39343867 39344159 -160285991 + AluSx SINE Alu 1 293 -19 592 155 15 110 chr5 39344159 39344262 -160285888 - Charlie5 DNA MER1_type -69 2555 2444 2358 34 41 10 chr5 39344770 39345063 -160285087 + AluY SINE Alu 1 302 -9 770 247 6 17 chr5 39345689 39345867 -160284283 + MER5B DNA MER1_type 3 178 0 4111 76 0 6 chr5 39345971 39346499 -160283651 + LTR17 LTR ERV1 256 780 0 16946 43 3 1 chr5 39346528 39348539 -160281611 + HERV17 LTR ERV1 1952 3965 -4661 10440 39 0 0 chr5 39348538 39349760 -160280390 + HERV17 LTR ERV1 4798 6019 -2607 * 272 95 0 0 chr5 39349753 39349795 -160280355 + HERV17 LTR ERV1 7510 7551 -1075 * 2333 59 7 0 chr5 39349782 39350072 -160280078 + HERV17 LTR ERV1 8335 8626 0 2728 34 9 0 chr5 39350072 39350394 -160279756 + LTR17 LTR ERV1 1 325 -455 387 0 0 0 chr5 39352018 39352061 -160278089 + (CA)n Simple_repeat Simple_repeat 2 44 0 492 48 0 0 chr5 39352078 39352141 -160278009 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 466 261 67 42 chr5 39352227 39352392 -160277758 - MIR SINE MIR -66 196 28 227 222 0 14 chr5 39352695 39352767 -160277383 + CT-rich Low_complexity Low_complexity 2 72 0 229 324 36 9 chr5 39353638 39353749 -160276401 + L1ME LINE L1 12 125 -5945 22 0 0 0 chr5 39354049 39354071 -160276079 + AT_rich Low_complexity Low_complexity 1 22 0 10701 165 62 39 chr5 39354126 39356899 -160273251 + L1MA2 LINE L1 15 3189 -4376 6721 17 0 0 chr5 39356916 39357688 -160272462 - L1PA2 LINE L1 0 6155 5384 3332 24 0 0 chr5 39357686 39358098 -160272052 + L1PA2 LINE L1 4979 5390 -756 * 6401 173 22 5 chr5 39358096 39359872 -160270278 + L1MA2 LINE L1 3174 4982 -2583 722 123 0 18 chr5 39359872 39359986 -160270164 - MER75 DNA T2_type 0 504 393 3064 94 14 48 chr5 39359986 39360487 -160269663 - L1M1 LINE L1 -4622 2943 2460 2468 141 32 2 chr5 39360487 39360892 -160269258 - MER75 DNA T2_type -97 417 1 9881 133 17 14 chr5 39360892 39363622 -160266528 + L1MA2 LINE L1 4979 7721 -2 1512 268 83 52 chr5 39363775 39365697 -160264453 + L1MEc LINE L1 1042 2980 -3235 492 261 37 78 chr5 39365852 39366070 -160264080 - MIR SINE MIR -23 239 31 338 359 19 0 chr5 39366055 39366161 -160263989 + L2 LINE L2 3138 3245 -27 * 545 261 135 80 chr5 39366167 39366604 -160263546 - MLT1L LTR MaLR -10 605 145 227 302 0 121 chr5 39367004 39367120 -160263030 + L2 LINE L2 2952 3053 -219 468 0 0 0 chr5 39367525 39367577 -160262573 + (CA)n Simple_repeat Simple_repeat 2 53 0 1329 231 100 39 chr5 39367752 39368210 -160261940 - MLT1D LTR MaLR 0 505 20 1070 235 167 46 chr5 39368286 39368831 -160261319 - MLT1L LTR MaLR 0 615 5 1158 152 71 9 chr5 39369068 39369292 -160260858 + AluJb SINE Alu 21 258 -54 252 298 51 51 chr5 39369503 39369661 -160260489 + MLT1J2 LTR MaLR 272 429 -21 315 0 0 0 chr5 39371189 39371224 -160258926 + (TG)n Simple_repeat Simple_repeat 1 35 0 1644 210 17 14 chr5 39371408 39371756 -160258394 + MLT1A1 LTR MaLR 17 365 0 591 272 5 11 chr5 39372219 39372403 -160257747 - L1MC5 LINE L1 -44 7917 7735 218 173 0 19 chr5 39372454 39372506 -160257644 + GA-rich Low_complexity Low_complexity 1 51 0 308 305 92 30 chr5 39374988 39375119 -160255031 + MER5A DNA MER1_type 46 184 -5 180 280 40 0 chr5 39375306 39375356 -160254794 - MIR SINE MIR -73 135 84 1081 203 56 65 chr5 39375545 39375973 -160254177 + L1MC5 LINE L1 7490 7913 -48 1110 266 29 44 chr5 39379067 39379548 -160250602 - L1ME4a LINE L1 -81 6040 5567 342 87 0 0 chr5 39379679 39379725 -160250425 - MLT2A1 LTR ERVL 0 453 408 279 0 0 0 chr5 39379725 39379756 -160250394 + (CA)n Simple_repeat Simple_repeat 2 32 0 213 196 0 0 chr5 39379755 39379801 -160250349 + (TA)n Simple_repeat Simple_repeat 2 47 0 * 2770 93 42 3 chr5 39379807 39380192 -160249958 - MLT2A1 LTR ERVL -44 400 1 2233 112 0 3 chr5 39380764 39381067 -160249083 - AluSg SINE Alu -2 308 7 258 305 42 59 chr5 39381184 39381302 -160248848 - L2 LINE L2 0 3272 3157 257 139 0 0 chr5 39381596 39381632 -160248518 - MLT2D LTR ERVL -5 510 472 276 30 0 0 chr5 39381632 39381665 -160248485 + (TG)n Simple_repeat Simple_repeat 2 34 0 2130 146 29 29 chr5 39381668 39382052 -160248098 + Tigger2a DNA MER2_type 1 384 -50 1513 210 82 8 chr5 39382062 39382428 -160247722 - MLT2D LTR ERVL -20 394 2 290 262 0 24 chr5 39382435 39382519 -160247631 - MIR SINE MIR -108 154 73 1687 258 82 48 chr5 39382693 39383279 -160246871 - MER21B LTR ERV1 -132 731 126 1663 183 11 57 chr5 39383366 39383519 -160246631 + L1MB2 LINE L1 5445 5604 -579 2671 89 13 5 chr5 39383519 39383891 -160246259 - THE1C LTR MaLR 0 375 1 1663 183 11 57 chr5 39383891 39384103 -160246047 + L1MB2 LINE L1 5604 5793 -390 336 133 27 13 chr5 39384111 39384186 -160245964 + (TA)n Simple_repeat Simple_repeat 1 76 0 302 242 11 63 chr5 39384189 39384284 -160245866 + L1MC4 LINE L1 6614 6703 -1339 257 82 16 49 chr5 39384284 39384345 -160245805 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 526 128 20 0 chr5 39384345 39384437 -160245713 + L1MB2 LINE L1 5782 5878 -305 20515 34 1 1 chr5 39384437 39387693 -160242457 + L1PA3 LINE L1 2899 6155 0 198 136 0 0 chr5 39387717 39387761 -160242389 + (A)n Simple_repeat Simple_repeat 1 44 0 1416 159 60 3 chr5 39387761 39388044 -160242106 + L1MB2 LINE L1 5871 6169 -2 2419 63 0 44 chr5 39388048 39388363 -160241787 + AluSc SINE Alu 1 301 -8 407 228 50 67 chr5 39388499 39388573 -160241577 + L1ME2 LINE L1 3194 3268 -2878 2029 140 20 0 chr5 39388573 39388865 -160241285 + AluSx SINE Alu 1 298 -14 407 228 50 67 chr5 39388865 39388970 -160241180 + L1ME2 LINE L1 3268 3370 -2776 4055 222 90 11 chr5 39388973 39391066 -160239084 + L1ME2 LINE L1 3906 6162 -2 194 262 24 107 chr5 39391123 39391207 -160238943 - MIR SINE MIR -66 142 66 431 220 94 63 chr5 39391637 39391796 -160238354 - L2 LINE L2 0 3313 3150 1791 110 41 21 chr5 39391805 39392095 -160238055 + MER1B DNA MER1_type 37 332 -7 621 256 69 5 chr5 39392117 39392320 -160237830 - L2 LINE L2 -171 3142 2927 744 173 20 89 chr5 39392411 39392613 -160237537 - MER5A DNA MER1_type -1 188 1 286 314 32 19 chr5 39392613 39392769 -160237381 - L2 LINE L2 -405 2909 2752 258 333 94 0 chr5 39393715 39393811 -160236339 + L3 LINE CR1 1468 1572 -5 328 281 34 11 chr5 39393935 39394024 -160236126 - MIR SINE MIR -11 251 161 1066 78 0 0 chr5 39394973 39395101 -160235049 + AluSp/q SINE Alu 168 295 -18 333 0 0 0 chr5 39395515 39395552 -160234598 + (TG)n Simple_repeat Simple_repeat 2 38 0 1794 116 0 0 chr5 39395735 39395967 -160234183 + AluSx SINE Alu 2 233 -79 304 339 25 0 chr5 39397609 39397727 -160232423 + MIR SINE MIR 21 141 -67 721 297 50 0 chr5 39397779 39397998 -160232152 - MIR SINE MIR -15 247 18 466 196 59 20 chr5 39400666 39400768 -160229382 - MER5A DNA MER1_type -80 109 4 2211 118 27 30 chr5 39400964 39401329 -160228821 + THE1B LTR MaLR 1 364 0 378 0 0 0 chr5 39401609 39401651 -160228499 + (CA)n Simple_repeat Simple_repeat 1 42 0 225 0 0 0 chr5 39401668 39401693 -160228457 + (GA)n Simple_repeat Simple_repeat 2 26 0 629 165 288 0 chr5 39402588 39402758 -160227392 - MER44D DNA MER2_type -89 520 32 492 250 64 64 chr5 39403135 39403355 -160226795 - HAL1 LINE L1 0 2507 2288 * 527 230 34 69 chr5 39403343 39403547 -160226603 - HAL1 LINE L1 -2289 218 22 353 298 53 15 chr5 39403673 39403804 -160226346 + MIR SINE MIR 3 138 -124 753 309 55 51 chr5 39404241 39404886 -160225264 + L2 LINE L2 2588 3247 -66 1871 146 103 11 chr5 39404886 39405255 -160224895 - MER57A LTR ERV1 0 403 1 753 309 55 51 chr5 39405255 39405323 -160224827 + L2 LINE L2 3247 3313 0 21 0 0 0 chr5 39405355 39405376 -160224774 + AT_rich Low_complexity Low_complexity 1 21 0 345 240 27 0 chr5 39405613 39405688 -160224462 + L2 LINE L2 3196 3272 0 2048 124 10 22 chr5 39406150 39406464 -160223686 + AluSq SINE Alu 1 310 -3 246 306 122 27 chr5 39406679 39406826 -160223324 + MER117 DNA MER1_type 1 161 -36 21 0 0 0 chr5 39406872 39406893 -160223257 + AT_rich Low_complexity Low_complexity 1 21 0 522 274 38 65 chr5 39406901 39407087 -160223063 - MIR SINE MIR -70 192 12 22 35 0 0 chr5 39407264 39407293 -160222857 + AT_rich Low_complexity Low_complexity 1 29 0 1511 201 0 26 chr5 39408295 39408599 -160221551 + AluJo SINE Alu 2 297 -15 336 311 22 22 chr5 39408713 39408848 -160221302 + MER5A DNA MER1_type 55 189 0 557 89 0 0 chr5 39408974 39409053 -160221097 + MADE1 DNA Mariner 2 80 0 401 256 12 61 chr5 39409895 39410059 -160220091 + L1ME4a LINE L1 5965 6120 -1 1964 132 14 10 chr5 39410081 39410377 -160219773 + AluSg SINE Alu 1 297 -13 2337 97 0 6 chr5 39411553 39411864 -160218286 - AluSc SINE Alu 0 309 1 2025 137 3 3 chr5 39412034 39412333 -160217817 + AluSx SINE Alu 1 299 -13 2436 74 0 13 chr5 39413090 39413400 -160216750 - AluSq SINE Alu -7 306 1 26 0 0 0 chr5 39413537 39413563 -160216587 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 39413906 39413934 -160216216 + AT_rich Low_complexity Low_complexity 1 28 0 1285 179 160 0 chr5 39415264 39415527 -160214623 + AluJb SINE Alu 1 305 -7 31 0 0 0 chr5 39415726 39415757 -160214393 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 39415810 39415838 -160214312 + AT_rich Low_complexity Low_complexity 1 28 0 181 309 0 0 chr5 39416459 39416501 -160213649 + L3 LINE CR1 1524 1565 -12 595 211 105 11 chr5 39416792 39416971 -160213179 + MIR SINE MIR 63 258 -4 22 70 0 0 chr5 39418373 39418416 -160211734 + AT_rich Low_complexity Low_complexity 1 43 0 2175 88 0 27 chr5 39418710 39419007 -160211143 - AluY SINE Alu -10 301 13 1991 138 3 3 chr5 39419490 39419786 -160210364 - AluSx SINE Alu -12 300 5 541 206 206 7 chr5 39420132 39420273 -160209877 + MER5B DNA MER1_type 8 176 -2 317 271 139 16 chr5 39420568 39420690 -160209460 + MIR SINE MIR 29 165 -97 22 70 0 0 chr5 39421115 39421158 -160208992 + AT_rich Low_complexity Low_complexity 1 43 0 25 31 0 0 chr5 39421482 39421514 -160208636 + AT_rich Low_complexity Low_complexity 1 32 0 38 61 0 0 chr5 39421688 39421754 -160208396 + AT_rich Low_complexity Low_complexity 1 66 0 272 259 35 35 chr5 39422840 39422925 -160207225 + MER5A DNA MER1_type 84 168 -21 593 294 44 18 chr5 39423780 39424008 -160206142 + MIR SINE MIR 29 262 0 616 262 107 39 chr5 39424629 39425014 -160205136 - L1ME4a LINE L1 -2 6119 5709 302 279 0 13 chr5 39426532 39426611 -160203539 + MIR SINE MIR 81 158 -104 334 306 72 27 chr5 39426814 39426925 -160203225 + MIR SINE MIR 34 149 -59 29 47 0 0 chr5 39428809 39428852 -160201298 + AT_rich Low_complexity Low_complexity 1 43 0 26 50 0 0 chr5 39429348 39429388 -160200762 + AT_rich Low_complexity Low_complexity 1 40 0 195 328 75 0 chr5 39430006 39430073 -160200077 + L2 LINE L2 3242 3313 0 360 315 92 0 chr5 39430196 39430380 -160199770 + MARNA DNA Mariner 48 248 -338 374 248 55 9 chr5 39430465 39430574 -160199576 + MARNA DNA Mariner 408 521 -65 28 29 0 0 chr5 39430616 39430651 -160199499 + AT_rich Low_complexity Low_complexity 1 35 0 212 293 0 28 chr5 39430873 39430979 -160199171 + GA-rich Low_complexity Low_complexity 2 104 0 2193 104 0 16 chr5 39431181 39431488 -160198662 - AluSx SINE Alu -8 304 3 24 32 0 0 chr5 39432042 39432073 -160198077 + AT_rich Low_complexity Low_complexity 1 31 0 1855 119 3 127 chr5 39432246 39432631 -160197519 - MER1B DNA MER1_type 0 337 1 1298 174 4 64 chr5 39432949 39433058 -160197092 + AluJb SINE Alu 38 152 -160 2238 82 7 7 chr5 39433058 39433352 -160196798 + AluSg1 SINE Alu 1 294 -15 1298 174 4 64 chr5 39433352 39433523 -160196627 + AluJb SINE Alu 152 301 -11 299 300 60 1 chr5 39433621 39433771 -160196379 - L1ME4a LINE L1 -670 5492 5336 2251 92 0 7 chr5 39433774 39434066 -160196084 + AluSc SINE Alu 3 292 -17 418 324 188 16 chr5 39434180 39434547 -160195603 + L2 LINE L2 2818 3247 -25 430 313 168 11 chr5 39434689 39434868 -160195282 - MIR SINE MIR -8 254 48 464 321 105 54 chr5 39434880 39435487 -160194663 - L2 LINE L2 -1112 2202 1565 487 257 50 14 chr5 39436052 39436192 -160193958 - MIR3 SINE MIR 0 208 64 344 296 161 60 chr5 39437125 39437708 -160192442 - L1M2 LINE L1 -5489 1360 758 214 322 0 0 chr5 39439300 39439359 -160190791 + MIR3 SINE MIR 135 193 -15 314 347 111 0 chr5 39441004 39441148 -160189002 + L2 LINE L2 2608 2767 -547 247 321 43 50 chr5 39441146 39441286 -160188864 - MER5A DNA MER1_type -30 159 21 * 663 72 72 0 chr5 39441579 39441764 -160188386 + AluSc SINE Alu 166 359 0 2548 258 136 12 chr5 39441767 39442688 -160187462 - L2 LINE L2 -1668 1646 612 2895 201 96 14 chr5 39442732 39442773 -160187377 - L1MC4 LINE L1 0 8042 8006 1800 90 9 128 chr5 39442773 39443116 -160187034 + AluSq SINE Alu 2 303 0 2895 201 96 14 chr5 39443116 39443807 -160186343 - L1MC4 LINE L1 -36 8006 7250 1564 160 0 22 chr5 39444255 39444523 -160185627 - AluJb SINE Alu -4 308 47 2293 100 3 0 chr5 39444791 39445092 -160185058 + AluSg SINE Alu 1 302 -8 397 226 208 13 chr5 39445859 39446018 -160184132 - L1MD3 LINE L1 -19 7976 7787 180 0 0 0 chr5 39446029 39446049 -160184101 + (TG)n Simple_repeat Simple_repeat 2 21 0 387 252 26 35 chr5 39446049 39446164 -160183986 - L1MD2 LINE L1 -254 6105 5992 21 57 0 0 chr5 39447540 39447575 -160182575 + AT_rich Low_complexity Low_complexity 1 35 0 1939 176 85 22 chr5 39448277 39448738 -160181412 - LTR2B LTR ERV1 0 490 1 194 204 0 19 chr5 39449693 39449747 -160180403 + CT-rich Low_complexity Low_complexity 2 54 0 368 326 174 6 chr5 39449818 39449996 -160180154 + MIR SINE MIR 48 255 -7 382 331 156 29 chr5 39451179 39451641 -160178509 + L3 LINE CR1 977 1555 -22 249 233 50 0 chr5 39452043 39452103 -160178047 + L2 LINE L2 3251 3313 0 705 306 130 9 chr5 39452310 39452633 -160177517 + L3 LINE CR1 1201 1562 -15 244 321 99 23 chr5 39453576 39453707 -160176443 - L2 LINE L2 -2 3311 3171 2389 252 34 27 chr5 39453837 39454592 -160175558 + L1MC2 LINE L1 806 1566 -4887 381 367 120 8 chr5 39454736 39454970 -160175180 - L2 LINE L2 -230 3042 2836 1995 128 54 7 chr5 39454970 39455268 -160174882 + AluSx SINE Alu 1 312 0 381 367 120 8 chr5 39455268 39455511 -160174639 - L2 LINE L2 -436 2836 2511 348 200 31 0 chr5 39455925 39455990 -160174160 + MER3 DNA MER1_type 40 106 -103 * 601 76 93 8 chr5 39455985 39456103 -160174047 + MER3 DNA MER1_type 2430 2557 0 182 194 0 0 chr5 39457067 39457098 -160173052 - MIR SINE MIR -29 233 203 560 216 9 9 chr5 39457146 39457257 -160172893 - MIR SINE MIR -147 115 5 342 230 79 40 chr5 39458914 39459040 -160171110 - MER94 DNA DNA -3 131 1 41 0 0 0 chr5 39459066 39459107 -160171043 + AT_rich Low_complexity Low_complexity 1 41 0 239 254 17 164 chr5 39459377 39459554 -160170596 + MIR SINE MIR 72 222 -40 24 32 0 0 chr5 39462408 39462439 -160167711 + AT_rich Low_complexity Low_complexity 1 31 0 309 98 98 0 chr5 39463381 39463442 -160166708 + L1MA6 LINE L1 6229 6295 -5 22 0 0 0 chr5 39463443 39463465 -160166685 + AT_rich Low_complexity Low_complexity 1 22 0 332 237 0 59 chr5 39463499 39463634 -160166516 + L1MC2 LINE L1 3928 4054 -2887 4703 174 93 30 chr5 39463710 39465793 -160164357 + L1MC2 LINE L1 4923 7123 -16 1712 165 3 21 chr5 39465794 39466085 -160164065 + AluJo SINE Alu 1 286 -26 2116 113 10 0 chr5 39466282 39466575 -160163575 - AluSq SINE Alu -17 296 1 455 290 62 0 chr5 39469037 39469182 -160160968 - LTR50 LTR ERVL -166 629 476 2139 154 77 15 chr5 39469300 39469525 -160160625 - MSTA LTR MaLR 0 428 218 2841 126 0 87 chr5 39469525 39470087 -160160063 + MER75 DNA T2_type 1 513 -1 2139 154 77 15 chr5 39470087 39470264 -160159886 - MSTA LTR MaLR -210 218 1 382 269 35 14 chr5 39470483 39470628 -160159522 + MLT1J2 LTR MaLR 5 152 -298 241 268 41 0 chr5 39470635 39470732 -160159418 + L1ME3A LINE L1 5261 5361 -998 1784 168 17 13 chr5 39470765 39471063 -160159087 - AluJo SINE Alu -8 304 6 21 0 0 0 chr5 39471128 39471149 -160159001 + AT_rich Low_complexity Low_complexity 1 21 0 958 197 17 21 chr5 39471150 39471409 -160158741 - LTR56 LTR ERV1 -5 433 201 1231 189 104 76 chr5 39471478 39471944 -160158206 + MER66A LTR ERV1 97 478 0 1179 113 20 10 chr5 39471944 39472146 -160158004 - LTR56 LTR ERV1 -241 204 1 949 232 91 117 chr5 39472147 39472841 -160157309 + L1ME3A LINE L1 5494 6169 -1 357 330 47 14 chr5 39472876 39473088 -160157062 + L1MEc LINE L1 1938 2156 -4240 359 342 8 0 chr5 39473218 39473335 -160156815 + L1ME3A LINE L1 6039 6156 -14 1907 145 3 3 chr5 39473345 39473652 -160156498 - AluSx SINE Alu 0 307 1 426 244 65 107 chr5 39473679 39474130 -160156020 + L1M4 LINE L1 3840 4276 -1870 224 273 33 98 chr5 39474143 39474326 -160155824 + MIR SINE MIR 73 243 -19 409 259 159 7 chr5 39474344 39474584 -160155566 + L2 LINE L2 2979 3313 0 2680 121 15 6 chr5 39475065 39475756 -160154394 - L1P4 LINE L1 -489 5672 4978 * 13322 148 20 30 chr5 39475740 39478968 -160151182 - L1PA12 LINE L1 -3364 4220 1011 2003 281 118 39 chr5 39478975 39480050 -160150100 - L1M3c LINE L1 -4763 1378 219 381 188 0 0 chr5 39480141 39480226 -160149924 + (TG)n Simple_repeat Simple_repeat 2 86 0 1460 233 103 53 chr5 39480300 39482004 -160148146 + L1ME LINE L1 3965 5766 -396 1078 268 52 63 chr5 39482425 39483024 -160147126 + L1P4 LINE L1 1405 2077 -4772 596 215 170 45 chr5 39483024 39483271 -160146879 + MER52A LTR ERV1 1 278 -1477 10595 209 25 47 chr5 39483273 39484802 -160145348 + L1P4 LINE L1 2684 4245 -2624 1655 196 0 0 chr5 39484802 39485077 -160145073 + AluJb SINE Alu 1 275 -37 10595 209 25 47 chr5 39485077 39485984 -160144166 + L1P4 LINE L1 4245 5170 -1699 538 122 0 11 chr5 39485984 39486074 -160144076 + L1MA1 LINE L1 6214 6302 0 10595 209 25 47 chr5 39486074 39486100 -160144050 + L1P4 LINE L1 5170 5195 -1674 2091 79 72 0 chr5 39486100 39486379 -160143771 + AluSq SINE Alu 1 299 -14 10595 209 25 47 chr5 39486379 39487609 -160142541 + L1P4 LINE L1 5195 6285 -584 1283 268 67 28 chr5 39487911 39488634 -160141516 + L1PA12 LINE L1 2179 2866 -4708 2595 145 40 17 chr5 39488657 39489303 -160140847 + L1P4 LINE L1 5083 5734 -432 303 273 38 30 chr5 39489294 39489426 -160140724 + L1MC4 LINE L1 6638 6770 -1272 * 186 195 0 73 chr5 39489437 39489478 -160140672 + L2 LINE L2 3180 3217 -96 183 269 30 45 chr5 39490746 39490813 -160139337 - L2 LINE L2 -821 2493 2428 2248 107 0 16 chr5 39490952 39491262 -160138888 - AluSx SINE Alu -7 305 1 409 214 11 0 chr5 39491993 39492082 -160138068 - MER70A LTR ERVL -3 469 380 287 302 65 51 chr5 39492200 39492554 -160137596 + L1M4 LINE L1 2185 2543 -3603 315 223 79 116 chr5 39492573 39492778 -160137372 - L1MC5 LINE L1 -48 7913 7702 806 70 0 9 chr5 39492778 39492893 -160137257 + (TTCC)n Simple_repeat Simple_repeat 3 116 0 1758 167 7 0 chr5 39492896 39493172 -160136978 - AluSg SINE Alu -32 278 1 315 223 79 116 chr5 39493172 39493254 -160136896 - L1MC5 LINE L1 -261 7700 7633 194 256 73 0 chr5 39493349 39493431 -160136719 + L2 LINE L2 3096 3183 -130 2265 108 0 3 chr5 39493474 39493771 -160136379 + AluSx SINE Alu 1 296 -16 524 15 15 0 chr5 39493914 39493979 -160136171 + (TC)n Simple_repeat Simple_repeat 1 66 0 237 333 44 54 chr5 39495923 39496127 -160134023 - MIR3 SINE MIR -2 206 5 1779 168 4 0 chr5 39497861 39498141 -160132009 + AluJb SINE Alu 5 285 -27 2265 115 0 3 chr5 39498739 39499035 -160131115 - AluSx SINE Alu -17 295 1 7622 23 0 1 chr5 39499072 39500557 -160129593 + L1PA3 LINE L1 4676 6159 0 653 169 64 47 chr5 39500566 39500614 -160129536 - L1MB4 LINE L1 -2 6178 6132 1867 133 0 58 chr5 39500614 39500922 -160129228 - AluSx SINE Alu -22 290 1 653 169 64 47 chr5 39500922 39501045 -160129105 - L1MB4 LINE L1 -48 6132 6004 3346 86 31 4 chr5 39501045 39501532 -160128618 - LTR3b LTR ERVK 0 500 1 443 100 0 14 chr5 39501546 39501616 -160128534 - HERVK14 LTR ERVK -61 5884 5816 2324 160 1 35 chr5 39501628 39502159 -160127991 - HERVK14 LTR ERVK -373 5572 5141 532 198 95 8 chr5 39502166 39502292 -160127858 - HERVK3 LTR ERVK -5790 1453 1317 434 267 0 0 chr5 39502277 39502378 -160127772 - HERVK3 LTR ERVK -6563 680 580 * 183 80 0 0 chr5 39502415 39502440 -160127710 + (A)n Simple_repeat Simple_repeat 1 25 0 429 210 134 105 chr5 39502442 39502680 -160127470 - HERVK3 LTR ERVK -6971 272 28 3458 100 6 4 chr5 39502914 39503413 -160126737 - LTR3b LTR ERVK 0 500 1 1595 170 58 0 chr5 39503413 39503742 -160126408 - L1MB4 LINE L1 -173 6010 5663 1820 173 3 17 chr5 39503955 39504256 -160125894 + AluJb SINE Alu 1 297 -15 189 0 0 0 chr5 39504256 39504277 -160125873 + (GA)n Simple_repeat Simple_repeat 2 22 0 512 261 18 58 chr5 39504709 39504935 -160125215 + MLT1D-int LTR MaLR 66 282 -1089 494 174 24 169 chr5 39504937 39505144 -160125006 + MLT1D-int LTR MaLR 484 660 -711 2601 186 22 7 chr5 39505210 39505673 -160124477 - MER70A LTR ERVL -2 470 1 281 306 0 0 chr5 39505673 39505758 -160124392 + MLT1D-int LTR MaLR 666 750 -621 238 88 0 0 chr5 39505758 39505792 -160124358 + Alu SINE Alu 1 34 -265 2176 115 6 13 chr5 39506263 39506576 -160123574 + AluSx SINE Alu 1 311 -1 842 133 0 0 chr5 39506651 39506771 -160123379 - AluSp/q SINE Alu -19 294 175 226 217 72 14 chr5 39506778 39506847 -160123303 + MLT1D-int LTR MaLR 813 885 -486 948 209 32 124 chr5 39507001 39507403 -160122747 + MLT1D-int LTR MaLR 963 1327 -44 2205 184 40 38 chr5 39507450 39507641 -160122509 + MLT1D LTR MaLR 1 190 -315 1691 76 31 5 chr5 39507641 39507865 -160122285 - MER30 DNA MER1_type 0 230 1 2205 184 40 38 chr5 39507865 39508177 -160121973 + MLT1D LTR MaLR 190 505 0 1197 208 0 15 chr5 39508177 39508442 -160121708 - HERVL74 LTR ERVL -1047 2509 2249 1399 238 50 1 chr5 39508549 39508940 -160121210 - HERVL74 LTR ERVL -1478 2096 1675 778 224 49 106 chr5 39508960 39509367 -160120783 - LTR52 LTR ERVL -37 384 1 300 246 34 51 chr5 39509376 39509494 -160120656 + HAL1 LINE L1 2392 2507 0 499 186 12 0 chr5 39509609 39509695 -160120455 + FRAM SINE Alu 73 159 -17 390 74 0 0 chr5 39510048 39510102 -160120048 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 186 364 17 25 chr5 39510604 39510722 -160119428 + L2 LINE L2 2967 3083 -189 2290 85 7 0 chr5 39510940 39511234 -160118916 - AluSq SINE Alu -17 296 1 301 101 7 94 chr5 39511630 39511768 -160118382 + (TAAAAA)n Simple_repeat Simple_repeat 4 129 0 478 277 32 26 chr5 39513028 39513183 -160116967 + MER96 DNA MER1_type? 20 175 0 266 325 26 0 chr5 39513415 39513529 -160116621 - MER5B DNA MER1_type -56 122 6 1958 155 53 35 chr5 39514435 39514809 -160115341 - MER4A LTR ERV1 0 664 284 685 96 19 10 chr5 39514802 39514906 -160115244 - MER4A LTR ERV1 -557 107 3 * 15036 163 33 15 chr5 39515007 39516185 -160113965 - L1MA3 LINE L1 -106 7618 6463 1994 76 43 29 chr5 39516185 39516462 -160113688 - AluSq SINE Alu -2 311 31 15036 163 33 15 chr5 39516462 39519630 -160110520 - L1MA3 LINE L1 -1261 6463 3199 7064 201 93 4 chr5 39519631 39521510 -160108640 - L1MA3 LINE L1 -5163 2402 14 692 168 80 0 chr5 39524560 39524685 -160105465 - FLAM_A SINE Alu -3 139 5 370 294 28 9 chr5 39524740 39524849 -160105301 + L2 LINE L2 3198 3308 -5 209 253 76 38 chr5 39526933 39527012 -160103138 - L2 LINE L2 -821 2493 2412 2158 92 3 38 chr5 39527427 39527743 -160102407 - AluSp SINE Alu -6 307 3 2162 184 29 15 chr5 39528186 39528598 -160101552 - MER70A LTR ERVL 0 472 55 5536 164 32 39 chr5 39528598 39529066 -160101084 - MER70A-int LTR ERVL -141 4882 4412 1143 44 0 0 chr5 39529066 39529202 -160100948 + L1PA4 LINE L1 6020 6155 0 5536 164 32 39 chr5 39529202 39529655 -160100495 - MER70A-int LTR ERVL -611 4412 3957 2281 119 3 0 chr5 39529655 39529966 -160100184 + AluSx SINE Alu 1 312 0 5536 164 32 39 chr5 39529966 39530168 -160099982 - MER70A-int LTR ERVL -1066 3957 3755 2116 174 88 8 chr5 39530168 39530564 -160099586 - MSTA LTR MaLR 0 428 1 5536 164 32 39 chr5 39530564 39531296 -160098854 - MER70A-int LTR ERVL -1268 3755 2947 2067 174 38 33 chr5 39531285 39531704 -160098446 - MER70A-int LTR ERVL -2216 2807 2387 * 2954 187 48 5 chr5 39531725 39532798 -160097352 - MER70A-int LTR ERVL -3832 1191 1 2689 159 28 30 chr5 39532798 39533271 -160096879 - MER70A LTR ERVL 0 472 1 2105 43 0 0 chr5 39534060 39534294 -160095856 + L1PA5 LINE L1 5908 6141 -13 183 129 0 0 chr5 39534349 39534380 -160095770 + (TTCTG)n Simple_repeat Simple_repeat 4 34 0 1911 222 44 44 chr5 39534702 39535242 -160094908 + L1MC4a LINE L1 5304 5843 -1965 509 171 36 0 chr5 39535298 39535409 -160094741 + L1MC4a LINE L1 5955 6069 -1739 1067 225 132 65 chr5 39535415 39535580 -160094570 + L1MC4a LINE L1 6110 6263 -1545 492 59 35 0 chr5 39535580 39535665 -160094485 + (TCTA)n Simple_repeat Simple_repeat 2 89 0 1067 225 132 65 chr5 39535665 39535726 -160094424 + L1MC4a LINE L1 6263 6318 -1490 1270 222 11 0 chr5 39535726 39535992 -160094158 - L1MB3 LINE L1 0 6183 5915 1067 225 132 65 chr5 39535992 39536271 -160093879 + L1MC4a LINE L1 6318 6650 -1158 438 219 6 94 chr5 39536261 39536421 -160093729 + L1MC4 LINE L1 6871 7016 -1026 * 5292 96 52 4 chr5 39536418 39537244 -160092906 - L1PBa LINE L1 -4231 2632 1767 615 240 56 15 chr5 39537363 39537559 -160092591 - L1MC5 LINE L1 -34 7927 7724 478 325 52 5 chr5 39538139 39538333 -160091817 - MIR SINE MIR -40 222 20 257 294 118 33 chr5 39539051 39539204 -160090946 - MIR SINE MIR -44 218 53 1158 278 108 10 chr5 39539364 39539770 -160090380 - MLT1J2 LTR MaLR 0 450 5 384 291 252 4 chr5 39540629 39540863 -160089287 - L1MC4a LINE L1 -1850 5958 5667 800 242 181 47 chr5 39590872 39591298 -160038852 - L2 LINE L2 -1121 2193 1711 1822 115 0 21 chr5 39591392 39591671 -160038479 + AluSg SINE Alu 38 310 0 300 398 54 0 chr5 39591693 39591914 -160038236 - L2 LINE L2 -571 2743 2511 348 200 31 0 chr5 39592335 39592400 -160037750 + MER3 DNA MER1_type 40 106 -103 * 601 76 93 8 chr5 39592395 39592513 -160037637 + MER3 DNA MER1_type 2469 2596 0 182 194 0 0 chr5 39593476 39593507 -160036643 - MIR SINE MIR -29 233 203 560 216 9 9 chr5 39593555 39593666 -160036484 - MIR SINE MIR -147 115 5 239 254 17 164 chr5 39594283 39594460 -160035690 + MIR SINE MIR 72 222 -40 24 32 0 0 chr5 39597165 39597196 -160032954 + AT_rich Low_complexity Low_complexity 1 31 0 314 98 98 0 chr5 39598138 39598199 -160031951 + L1MA6 LINE L1 6229 6295 -5 22 0 0 0 chr5 39598200 39598222 -160031928 + AT_rich Low_complexity Low_complexity 1 22 0 339 231 8 60 chr5 39598256 39598390 -160031760 + L1MC2 LINE L1 3133 3259 -2887 4886 175 93 30 chr5 39598466 39600522 -160029628 + L1MC2 LINE L1 4128 6301 -43 324 172 0 45 chr5 39600522 39600594 -160029556 + Alu SINE Alu 1 46 -256 2095 113 10 0 chr5 39600858 39601151 -160028999 - AluSq SINE Alu -17 296 1 200 309 15 0 chr5 39602504 39602572 -160027578 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 503 335 45 0 chr5 39603556 39603756 -160026394 - LTR50 LTR ERVL -111 684 476 1135 142 80 50 chr5 39603874 39604113 -160026037 - MSTA LTR MaLR 0 428 183 2606 127 0 93 chr5 39604113 39604619 -160025531 + MER75 DNA T2_type 1 459 -55 989 167 58 0 chr5 39604726 39604900 -160025250 - MSTA LTR MaLR -244 184 1 430 269 35 14 chr5 39605119 39605264 -160024886 + MLT1J2 LTR MaLR 5 152 -298 261 268 41 0 chr5 39605271 39605368 -160024782 + L1ME3A LINE L1 5261 5361 -998 1753 168 17 13 chr5 39605401 39605699 -160024451 - AluJo SINE Alu -8 304 6 834 164 13 66 chr5 39605789 39606057 -160024093 - LTR56 LTR ERV1 -5 432 201 1324 189 104 76 chr5 39606126 39606592 -160023558 + MER66A LTR ERV1 97 478 0 1233 109 25 10 chr5 39606592 39606793 -160023357 - LTR56 LTR ERV1 -241 204 1 1085 224 94 118 chr5 39606794 39607487 -160022663 + L1ME3A LINE L1 5494 6169 -1 370 325 47 14 chr5 39607522 39607734 -160022416 + L1MEc LINE L1 1938 2156 -4240 228 342 8 0 chr5 39607864 39607981 -160022169 + L1ME3A LINE L1 6039 6156 -14 1937 145 3 0 chr5 39607991 39608297 -160021853 - AluSx SINE Alu 0 307 1 555 252 54 99 chr5 39608324 39608749 -160021401 + L1M4 LINE L1 3840 4245 -1901 207 279 33 98 chr5 39608786 39608969 -160021181 + MIR SINE MIR 73 243 -19 411 259 159 7 chr5 39608987 39609227 -160020923 + L2 LINE L2 2979 3313 0 2816 121 15 6 chr5 39609708 39610399 -160019751 - L1P4 LINE L1 -489 5672 4978 * 13195 174 22 30 chr5 39610383 39613605 -160016545 - L1PA12 LINE L1 -3364 4220 1011 522 201 79 32 chr5 39613612 39613801 -160016349 - L1M3c LINE L1 -4763 1378 1181 2300 256 35 25 chr5 39613901 39614616 -160015534 - L1MCc LINE L1 -4896 1527 806 244 321 99 23 chr5 39614746 39614877 -160015273 + L2 LINE L2 3171 3311 -2 705 306 130 9 chr5 39615821 39616144 -160014006 - L3 LINE CR1 -15 1562 1201 249 233 50 0 chr5 39616351 39616411 -160013739 - L2 LINE L2 0 3313 3251 382 331 156 29 chr5 39616813 39617275 -160012875 - L3 LINE CR1 -22 1555 977 368 326 174 6 chr5 39618463 39618641 -160011509 - MIR SINE MIR -7 255 48 194 204 0 19 chr5 39618712 39618766 -160011384 + GA-rich Low_complexity Low_complexity 2 54 0 1939 176 85 22 chr5 39619706 39620167 -160009983 + LTR2B LTR ERV1 1 490 0 21 57 0 0 chr5 39620869 39620904 -160009246 + AT_rich Low_complexity Low_complexity 1 35 0 2293 100 3 0 chr5 39622531 39622832 -160007318 - AluSg SINE Alu -8 302 1 1564 160 0 22 chr5 39623100 39623368 -160006782 + AluJb SINE Alu 47 308 -4 2895 201 96 14 chr5 39623816 39624507 -160005643 + L1MC4 LINE L1 7250 8006 -36 1800 90 9 128 chr5 39624507 39624850 -160005300 - AluSq SINE Alu 0 303 2 2895 201 96 14 chr5 39624850 39624891 -160005259 + L1MC4 LINE L1 8006 8042 0 2521 259 137 11 chr5 39624935 39625854 -160004296 + L2 LINE L2 612 1646 -1668 1094 84 14 0 chr5 39625857 39626060 -160004090 - AluSc SINE Alu 0 359 155 901 40 0 0 chr5 39626061 39626162 -160003988 - AluSc SINE Alu -54 255 155 229 69 0 0 chr5 39626163 39626192 -160003958 - Alu SINE Alu -44 255 227 217 303 13 53 chr5 39626292 39626368 -160003782 + L2 LINE L2 2250 2322 -992 * 372 229 118 49 chr5 39626348 39626492 -160003658 + L2 LINE L2 3159 3312 -1 21 36 0 0 chr5 39626617 39626645 -160003505 + AT_rich Low_complexity Low_complexity 1 28 0 1748 148 86 12 chr5 39626910 39627234 -160002916 + MER7A DNA MER2_type 1 346 0 36 70 0 0 chr5 39628191 39628262 -160001888 + AT_rich Low_complexity Low_complexity 1 71 0 257 159 0 0 chr5 39628629 39628673 -160001477 + MIR SINE MIR 71 114 -148 41 72 0 0 chr5 39628908 39628991 -160001159 + AT_rich Low_complexity Low_complexity 1 83 0 934 152 0 0 chr5 39630001 39630139 -160000011 + AluJb SINE Alu 4 141 -171 240 35 0 0 chr5 39630156 39630185 -159999965 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 227 211 92 13 chr5 39630616 39630692 -159999458 + L1M4 LINE L1 5209 5290 -856 185 351 54 60 chr5 39631076 39631244 -159998906 - L2 LINE L2 -250 3022 2856 750 130 35 0 chr5 39632532 39632647 -159997503 + L1MA3 LINE L1 16 134 -7431 * 14605 154 44 16 chr5 39632645 39633667 -159996483 + L1MA3 LINE L1 1105 2097 -5468 1764 147 14 24 chr5 39633667 39633959 -159996191 + AluJb SINE Alu 1 289 -23 14605 154 44 16 chr5 39633959 39634932 -159995218 + L1MA3 LINE L1 2097 3183 -4382 3454 31 2 2 chr5 39634932 39635351 -159994799 + L1PA4 LINE L1 5734 6152 -3 14605 154 44 16 chr5 39635351 39635808 -159994342 + L1MA3 LINE L1 3183 3626 -3939 9831 166 45 56 chr5 39635794 39638729 -159991421 + L1MA3 LINE L1 4709 7613 -111 * 25 83 0 0 chr5 39639256 39639316 -159990834 + AT_rich Low_complexity Low_complexity 1 60 0 210 71 0 0 chr5 39639508 39639536 -159990614 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 315 286 68 61 chr5 39639563 39639583 -159990567 - L2 LINE L2 -209 3063 3045 2362 133 98 16 chr5 39639583 39640013 -159990137 + MLT1C LTR MaLR 1 465 -2 315 286 68 61 chr5 39640013 39640139 -159990011 - L2 LINE L2 -227 3045 2916 834 196 52 5 chr5 39640161 39640356 -159989794 + MER58B DNA MER1_type 16 341 0 649 227 77 31 chr5 39640371 39640565 -159989585 + MIR SINE MIR 60 262 0 209 335 144 46 chr5 39640649 39640843 -159989307 - L2 LINE L2 -400 2914 2702 421 282 0 0 chr5 39641170 39641273 -159988877 + MER94 DNA DNA 1 103 -31 465 300 111 62 chr5 39642970 39643437 -159986713 - L2 LINE L2 -887 2427 1938 1215 223 54 26 chr5 39643554 39643940 -159986210 + L1ME3 LINE L1 5765 6161 -1 7578 205 114 42 chr5 39644129 39645766 -159984384 + MER52A LTR ERV1 1 1755 0 328 312 33 107 chr5 39645821 39646158 -159983992 - L2 LINE L2 -1839 1475 1164 197 214 48 71 chr5 39646162 39646246 -159983904 - L2 LINE L2 -976 2338 2257 21 36 0 0 chr5 39647573 39647601 -159982549 + AT_rich Low_complexity Low_complexity 1 28 0 2138 122 0 3 chr5 39648349 39648652 -159981498 + AluSq SINE Alu 6 307 -6 547 302 44 28 chr5 39648887 39649135 -159981015 + L2 LINE L2 3061 3312 -1 716 140 9 0 chr5 39649354 39649468 -159980682 - AluJb SINE Alu -197 115 1 267 242 11 11 chr5 39649719 39649810 -159980340 + L1ME LINE L1 5766 5856 -265 1290 243 39 41 chr5 39650108 39650334 -159979816 - MLT1E2 LTR MaLR 0 626 400 1540 185 3 25 chr5 39650334 39650620 -159979530 - AluJo SINE Alu -32 280 1 1290 243 39 41 chr5 39650620 39650731 -159979419 - MLT1E2 LTR MaLR -226 400 290 549 105 19 57 chr5 39650744 39650849 -159979301 - L1MA9 LINE L1 -36 6276 6176 525 44 0 0 chr5 39650862 39650930 -159979220 + (TG)n Simple_repeat Simple_repeat 1 68 0 287 242 0 45 chr5 39651037 39651103 -159979047 - MLT1E2 LTR MaLR -563 63 1 234 91 0 0 chr5 39651299 39651332 -159978818 + (ATG)n Simple_repeat Simple_repeat 2 34 0 793 252 60 11 chr5 39652136 39652402 -159977748 + L1MCc LINE L1 25 303 -6120 589 307 50 29 chr5 39652486 39652727 -159977423 - MIR SINE MIR -3 259 14 584 222 167 0 chr5 39653070 39653232 -159976918 - L2 LINE L2 0 3313 3125 604 261 121 10 chr5 39653349 39653556 -159976594 - MLT1J LTR MaLR -77 434 205 2263 100 3 3 chr5 39653568 39653868 -159976282 + AluSp SINE Alu 1 300 -13 285 29 0 0 chr5 39657156 39657190 -159972960 + (TA)n Simple_repeat Simple_repeat 2 35 0 1576 261 37 29 chr5 39657884 39658472 -159971678 - L2 LINE L2 -3 3310 2639 1674 143 24 44 chr5 39658490 39658783 -159971367 - AluJo SINE Alu -25 287 1 256 232 18 0 chr5 39658801 39658857 -159971293 - L2 LINE L2 -750 2564 2508 209 171 0 0 chr5 39659027 39659062 -159971088 + (TTGG)n Simple_repeat Simple_repeat 3 37 0 628 104 31 0 chr5 39659062 39659158 -159970992 + U6 snRNA snRNA 2 100 -7 616 258 103 15 chr5 39659268 39659473 -159970677 + MIR SINE MIR 16 236 -26 196 319 124 44 chr5 39660729 39660842 -159969308 - MER5A DNA MER1_type -11 178 57 596 201 158 22 chr5 39660881 39661065 -159969085 + MER112 DNA MER1_type 34 242 -18 381 210 180 10 chr5 39661137 39661237 -159968913 - L2 LINE L2 0 3313 3197 339 232 72 0 chr5 39662670 39662739 -159967411 + MIR SINE MIR 20 93 -169 261 207 52 0 chr5 39662970 39663028 -159967122 - L2 LINE L2 -4 3309 3249 252 283 0 0 chr5 39663070 39663130 -159967020 - L2 LINE L2 -262 3051 2992 1025 272 42 0 chr5 39663507 39663790 -159966360 + LTR16C LTR ERVL 191 485 -6 503 296 65 15 chr5 39663950 39664149 -159966001 - MIR SINE MIR -26 236 28 272 331 73 68 chr5 39664285 39664533 -159965617 + L2 LINE L2 3022 3270 -2 466 322 106 49 chr5 39664934 39665198 -159964952 + L2 LINE L2 2994 3272 0 221 268 14 42 chr5 39665674 39665745 -159964405 + L2 LINE L2 3184 3252 -20 1126 247 149 18 chr5 39665999 39666618 -159963532 + L2 LINE L2 2630 3313 0 2376 78 31 65 chr5 39666682 39667068 -159963082 - THE1C LTR MaLR -2 373 1 391 276 49 0 chr5 39668059 39668182 -159961968 + MIR SINE MIR 22 150 -112 1029 207 80 4 chr5 39668748 39668999 -159961151 - L1MA9 LINE L1 -38 6274 6005 347 276 238 9 chr5 39669035 39669245 -159960905 - MIR SINE MIR 0 262 5 196 347 136 22 chr5 39671233 39671556 -159958594 + L2 LINE L2 2004 2394 -920 2034 122 10 7 chr5 39671556 39671860 -159958290 - AluSg SINE Alu -5 305 1 196 347 136 22 chr5 39671860 39671985 -159958165 + L2 LINE L2 2394 2503 -811 290 221 35 70 chr5 39672540 39672626 -159957524 - L2 LINE L2 0 3272 3190 2304 110 0 0 chr5 39673105 39673405 -159956745 + AluSq SINE Alu 1 300 -13 685 264 64 24 chr5 39673591 39673841 -159956309 - MIR SINE MIR 0 262 3 274 283 65 0 chr5 39674035 39674127 -159956023 - MIR SINE MIR -49 213 116 284 266 117 0 chr5 39675789 39675883 -159954267 - MIR SINE MIR -111 151 47 525 286 92 0 chr5 39676011 39676207 -159953943 + MER20 DNA MER1_type 2 215 -4 369 277 75 11 chr5 39677159 39677359 -159952791 - L1MC/D LINE L1 -463 5658 5533 963 252 27 0 chr5 39677802 39678024 -159952126 + MIR SINE MIR 33 260 -2 180 296 37 37 chr5 39678110 39678191 -159951959 + MIR3 SINE MIR 104 184 -24 1441 267 178 19 chr5 39678455 39679362 -159950788 - L2 LINE L2 -6 3307 2258 306 221 13 13 chr5 39679487 39679564 -159950586 - L1ME4a LINE L1 -81 6040 5964 34 24 0 0 chr5 39680365 39680406 -159949744 + AT_rich Low_complexity Low_complexity 1 41 0 315 288 0 0 chr5 39680791 39680871 -159949279 - L1M4 LINE L1 -1998 4148 4069 307 279 12 47 chr5 39681759 39681845 -159948305 - MIR SINE MIR -85 123 41 211 301 48 29 chr5 39684594 39684697 -159945453 - L2 LINE L2 -558 2756 2652 21 36 0 0 chr5 39686923 39686951 -159943199 + AT_rich Low_complexity Low_complexity 1 28 0 2517 57 0 3 chr5 39687208 39687508 -159942642 - AluY SINE Alu -12 299 1 21 57 0 0 chr5 39687601 39687636 -159942514 + AT_rich Low_complexity Low_complexity 1 35 0 3611 40 0 7 chr5 39688205 39688651 -159941499 - L1PA5 LINE L1 -4 6150 5708 39875 62 9 8 chr5 39688751 39694468 -159935682 - L1PA5 LINE L1 -432 5722 2 735 234 208 21 chr5 39694793 39695268 -159934882 - L1MC5 LINE L1 -66 7895 7332 889 199 70 11 chr5 39695277 39695463 -159934687 + MER20 DNA MER1_type 6 202 -17 2207 96 13 7 chr5 39697299 39697601 -159932549 + AluSg SINE Alu 1 304 -6 378 271 85 25 chr5 39697936 39698054 -159932096 + L2 LINE L2 3188 3312 -1 22 56 0 0 chr5 39698647 39698683 -159931467 + AT_rich Low_complexity Low_complexity 1 36 0 1996 227 73 73 chr5 39699722 39700545 -159929605 - L1ME3A LINE L1 -5 6165 5343 2017 37 0 0 chr5 39700863 39701105 -159929045 + L1PA4 LINE L1 5911 6152 -3 296 287 155 16 chr5 39701542 39701671 -159928479 - MIR3 SINE MIR -43 165 19 25 31 0 0 chr5 39702205 39702237 -159927913 + AT_rich Low_complexity Low_complexity 1 32 0 2895 171 32 10 chr5 39702397 39702895 -159927255 + Tigger7 DNA MER2_type 17 525 -208 544 126 46 0 chr5 39702889 39702976 -159927174 + Tigger7 DNA MER2_type 2396 2486 -1 * 419 287 170 12 chr5 39703200 39703447 -159926703 + L1MC/D LINE L1 5494 5779 -2029 22 0 0 0 chr5 39703568 39703590 -159926560 + AT_rich Low_complexity Low_complexity 1 22 0 1017 278 108 10 chr5 39704470 39704876 -159925274 + MLT1J2 LTR MaLR 5 450 0 281 312 110 32 chr5 39705035 39705189 -159924961 + MIR SINE MIR 53 218 -44 511 335 61 4 chr5 39705908 39706138 -159924012 + MIR SINE MIR 20 262 0 212 347 222 18 chr5 39706160 39706327 -159923823 - MIR3 SINE MIR -5 203 3 574 240 56 15 chr5 39706682 39706878 -159923272 + L1MC5 LINE L1 7724 7927 -34 200 240 60 0 chr5 39706987 39707037 -159923113 - L2 LINE L2 -2 3311 3259 5184 66 0 0 chr5 39707571 39708221 -159921929 + L1PA6 LINE L1 5494 6143 -11 22 35 0 0 chr5 39708221 39708250 -159921900 + AT_rich Low_complexity Low_complexity 1 29 0 257 322 178 41 chr5 39708331 39708725 -159921425 - L2 LINE L2 -723 2591 2144 610 322 78 17 chr5 39710752 39710982 -159919168 + MIR SINE MIR 8 251 -11 961 241 28 31 chr5 39712391 39712677 -159917473 + L1MC4 LINE L1 7413 7593 -368 524 236 7 57 chr5 39712798 39712938 -159917212 + FLAM_A SINE Alu 1 133 0 835 87 0 0 chr5 39712954 39713058 -159917092 + AluSx SINE Alu 1 104 -209 1607 87 0 0 chr5 39713084 39713292 -159916858 - MER11B LTR ERVK -1023 213 6 1360 104 5 15 chr5 39713292 39713494 -159916656 + AluSx SINE Alu 95 294 -18 244 203 203 0 chr5 39713510 39713579 -159916571 - MER103 DNA DNA -72 94 12 1606 228 102 54 chr5 39714721 39715238 -159914912 + MLT1F LTR MaLR 1 542 0 2251 89 7 0 chr5 39716116 39716407 -159913743 - AluSq SINE Alu -20 293 1 730 262 94 12 chr5 39716522 39716766 -159913384 + MLT1J2 LTR MaLR 55 318 -132 1160 164 5 0 chr5 39716865 39717054 -159913096 - MER2 DNA MER2_type -155 190 1 244 269 181 27 chr5 39717075 39717224 -159912926 - HAL1 LINE L1 -1037 1470 1299 6111 128 41 13 chr5 39717236 39718455 -159911695 - L1MA4A LINE L1 -11 6292 5045 241 237 140 0 chr5 39718450 39718543 -159911607 - HAL1 LINE L1 -1194 1313 1208 * 256 186 23 58 chr5 39720440 39720526 -159909624 - Tigger6b DNA MER2_type -761 836 754 1979 144 0 3 chr5 39721148 39721454 -159908696 - AluJb SINE Alu -7 305 1 259 291 146 0 chr5 39722052 39722155 -159907995 + MIR3 SINE MIR 54 171 -37 1714 198 57 37 chr5 39722751 39723155 -159906995 - MLT1F LTR MaLR -130 412 1 1117 190 17 13 chr5 39723276 39723508 -159906642 + MLT1F1 LTR MaLR 333 565 -2 292 254 141 7 chr5 39724005 39724147 -159906003 - L2 LINE L2 -2 3311 3151 418 249 24 115 chr5 39724994 39725027 -159905123 - L2 LINE L2 -494 2820 2786 596 191 9 17 chr5 39725027 39725142 -159905008 + MER81 DNA DNA 1 114 0 418 249 24 115 chr5 39725142 39725317 -159904833 - L2 LINE L2 -528 2786 2631 1986 120 4 0 chr5 39726273 39726548 -159903602 + AluSx SINE Alu 34 309 -3 301 202 258 16 chr5 39727873 39727997 -159902153 - MER20 DNA MER1_type 0 219 66 22 0 0 0 chr5 39729252 39729274 -159900876 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr5 39729720 39729756 -159900394 + AT_rich Low_complexity Low_complexity 1 36 0 994 50 0 36 chr5 39729901 39730040 -159900110 - AluY SINE Alu 0 311 178 607 256 0 0 chr5 39730503 39730636 -159899514 - FLAM_A SINE Alu 0 133 1 1664 183 3 20 chr5 39730694 39730995 -159899155 - AluJb SINE Alu -16 296 1 773 271 133 75 chr5 39731664 39732213 -159897937 + L2 LINE L2 2165 2745 -569 304 262 233 0 chr5 39732557 39732660 -159897490 + L2 LINE L2 3182 3308 -5 2071 120 3 31 chr5 39834073 39834390 -159795760 + AluSq SINE Alu 1 308 -5 449 264 7 0 chr5 39834678 39834826 -159795324 + (TG)n Simple_repeat Simple_repeat 2 150 0 300 324 28 35 chr5 39836184 39836329 -159793821 + MIR SINE MIR 70 213 -49 236 261 14 0 chr5 39836522 39836591 -159793559 + HAL1 LINE L1 1 70 -2437 2063 114 49 3 chr5 39836618 39836968 -159793182 + L1MA2 LINE L1 5939 6304 0 23 0 0 0 chr5 39836968 39836991 -159793159 + AT_rich Low_complexity Low_complexity 1 23 0 198 270 40 14 chr5 39837106 39837180 -159792970 + MER5B DNA MER1_type 103 178 0 204 297 90 27 chr5 39837219 39837330 -159792820 - MER5A DNA MER1_type 0 189 72 * 234 313 48 12 chr5 39837248 39837331 -159792819 + MER5A DNA MER1_type 44 129 -60 209 296 61 98 chr5 39837410 39837542 -159792608 - MER5A DNA MER1_type -26 163 37 375 278 186 27 chr5 39838809 39839147 -159791003 + HAL1 LINE L1 1 392 -2115 282 29 0 0 chr5 39839213 39839248 -159790902 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 2069 94 7 4 chr5 39839248 39839524 -159790626 - AluSc SINE Alu -32 277 1 502 229 223 11 chr5 39840689 39840864 -159789286 + MIR SINE MIR 50 261 -1 434 286 40 16 chr5 39840975 39841101 -159789049 + L2 LINE L2 3140 3268 -4 621 241 64 75 chr5 39841911 39842193 -159787957 - LTR16C LTR ERVL -25 466 188 250 284 12 12 chr5 39842556 39842637 -159787513 - L3 LINE CR1 -308 1269 1189 1172 153 110 4 chr5 39842769 39842997 -159787153 + MLT1D LTR MaLR 248 499 -6 1215 232 30 57 chr5 39842997 39843522 -159786628 + L1M4 LINE L1 2276 2786 -3360 915 255 24 61 chr5 39843553 39844044 -159786106 + L1M4 LINE L1 2968 3440 -2706 763 190 3 129 chr5 39844039 39844350 -159785800 + L1ME1 LINE L1 5840 6111 -55 * 1646 154 44 7 chr5 39844350 39844828 -159785322 + L1MA5 LINE L1 5044 5534 -743 312 122 0 0 chr5 39844971 39845020 -159785130 - MADE1 DNA Mariner -30 50 2 4349 114 26 15 chr5 39845020 39845231 -159784919 + L1MA5 LINE L1 5568 5775 -525 2292 111 0 13 chr5 39845231 39845547 -159784603 + AluSx SINE Alu 1 312 0 4349 114 26 15 chr5 39845547 39846060 -159784090 + L1MA5 LINE L1 5775 6300 0 2225 84 0 4 chr5 39846232 39846506 -159783644 + AluSq SINE Alu 27 299 -14 231 235 24 47 chr5 39848303 39848388 -159781762 - LTR67 LTR ERVL 0 557 475 484 277 51 63 chr5 39848735 39849085 -159781065 + LTR16C LTR ERVL 146 491 0 181 299 119 0 chr5 39849200 39849267 -159780883 + L2 LINE L2 3198 3272 0 371 304 74 15 chr5 39849379 39849514 -159780636 + MIR SINE MIR 23 165 -97 210 200 0 55 chr5 39849561 39849616 -159780534 - MIR SINE MIR -98 164 113 822 181 6 30 chr5 39849839 39850005 -159780145 + MLT1A2 LTR MaLR 1 162 -212 2157 135 3 0 chr5 39850534 39850846 -159779304 + AluSq SINE Alu 1 313 0 365 274 88 36 chr5 39850962 39851181 -159778969 + L1MEc LINE L1 2185 2377 -3838 1037 201 59 70 chr5 39851275 39851663 -159778487 - L1MA8 LINE L1 -1 6290 5907 481 207 0 0 chr5 39851665 39851752 -159778398 + MER44D DNA MER2_type 1 357 -252 2149 138 10 50 chr5 39851754 39852256 -159777894 - L1MA8 LINE L1 -509 5791 5310 219 36 0 0 chr5 39852256 39852284 -159777866 + (TTG)n Simple_repeat Simple_repeat 1 28 0 936 78 0 0 chr5 39852387 39852503 -159777647 + AluSg/x SINE Alu 180 295 -14 6123 104 34 0 chr5 39852505 39853600 -159776550 - L1PA15 LINE L1 -16 6149 5040 1975 162 30 5 chr5 39853600 39854007 -159776143 - L1MA8 LINE L1 -1315 4831 4415 3153 228 17 11 chr5 39854031 39854965 -159775185 + L1MEc LINE L1 2509 3448 -2767 2067 115 12 18 chr5 39854972 39855326 -159774824 + L1PB3 LINE L1 5819 6170 0 982 89 62 42 chr5 39855326 39855576 -159774574 - Tigger3(Golem) DNA MER2_type -460 2568 2310 947 214 59 0 chr5 39855574 39855761 -159774389 - Tigger3(Golem) DNA MER2_type -2831 198 1 * 232 319 31 74 chr5 39855978 39856141 -159774009 - LTR16C LTR ERVL -263 228 73 2335 90 0 0 chr5 39856475 39856765 -159773385 + AluSc SINE Alu 1 290 -19 281 295 63 30 chr5 39856985 39857253 -159772897 + HAL1b LINE L1 75 351 -997 295 187 151 29 chr5 39857288 39857427 -159772723 + HAL1b LINE L1 333 488 -860 239 269 113 7 chr5 39857451 39857592 -159772558 + HAL1b LINE L1 531 686 -662 1820 217 39 31 chr5 39857677 39858346 -159771804 + L1ME1 LINE L1 2642 3315 -2900 910 186 0 68 chr5 39858376 39858624 -159771526 + AluJb SINE Alu 1 231 -81 3908 240 51 19 chr5 39858780 39860175 -159769975 + L1ME1 LINE L1 3469 4908 -1307 810 195 52 27 chr5 39860193 39860236 -159769914 + L1ME1 LINE L1 5234 5274 -957 2133 113 26 0 chr5 39860236 39860538 -159769612 + AluSx SINE Alu 3 312 0 810 195 52 27 chr5 39860538 39860814 -159769336 + L1ME1 LINE L1 5274 5554 -677 1329 106 6 6 chr5 39860816 39860996 -159769154 + AluSg/x SINE Alu 130 309 -3 1140 225 75 6 chr5 39861011 39861344 -159768806 + L1ME1 LINE L1 5578 5933 -302 996 85 0 0 chr5 39861567 39861697 -159768453 - AluSp/q SINE Alu -10 303 174 882 292 102 9 chr5 39861797 39862229 -159767921 - HAL1 LINE L1 -1809 698 227 244 247 0 41 chr5 39862304 39862377 -159767773 - HAL1 LINE L1 -2402 105 36 2379 166 23 13 chr5 39862383 39862854 -159767296 - L1MB8 LINE L1 -10 6168 5693 3064 127 7 38 chr5 39862854 39863402 -159766748 - L1PA15 LINE L1 -4 6161 5628 2501 151 33 27 chr5 39863585 39864313 -159765837 - L1PA15 LINE L1 -616 5549 4815 * 5197 174 6 29 chr5 39864311 39865441 -159764709 + L1P LINE L1 3748 4851 -1295 2250 112 23 3 chr5 39865475 39865780 -159764370 - AluSq SINE Alu -2 311 1 1728 266 31 48 chr5 39865895 39866659 -159763491 - L1MB8 LINE L1 -577 5601 4848 1628 136 3 28 chr5 39866668 39866955 -159763195 + L1MB1 LINE L1 5692 5971 -197 530 165 0 0 chr5 39867064 39867155 -159762995 + AluSg/x SINE Alu 212 302 -7 2040 122 7 3 chr5 39867315 39867610 -159762540 - AluSx SINE Alu -16 296 1 190 373 0 0 chr5 39867613 39867680 -159762470 - L2 LINE L2 -482 2832 2766 475 218 296 0 chr5 39867688 39867830 -159762320 - MER5A DNA MER1_type -2 187 4 355 98 0 0 chr5 39868568 39868619 -159761531 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 2234 89 3 0 chr5 39868607 39868901 -159761249 - AluSp SINE Alu -1 333 1 254 340 165 0 chr5 39869063 39869160 -159760990 - L2 LINE L2 -4 3268 3156 335 250 69 17 chr5 39869241 39869467 -159760683 + L1 LINE L1 5187 5425 -758 2286 104 0 0 chr5 39869539 39869836 -159760314 - AluSg SINE Alu -13 297 1 2240 96 3 7 chr5 39870387 39870689 -159759461 - AluSx SINE Alu -9 303 3 1618 174 76 0 chr5 39871008 39871283 -159758867 + AluJb SINE Alu 5 300 -12 2282 89 7 3 chr5 39871286 39871578 -159758572 + AluSc SINE Alu 2 294 -15 396 250 83 81 chr5 39871708 39872128 -159758022 + L1MC4 LINE L1 7622 8042 0 421 256 36 67 chr5 39872219 39872414 -159757736 - L1ME LINE L1 -440 5681 5493 2332 108 0 13 chr5 39872661 39872976 -159757174 - AluSx SINE Alu -1 311 1 683 277 71 31 chr5 39873237 39873713 -159756437 - L1ME LINE L1 -1295 4851 4357 2102 117 3 7 chr5 39873885 39874185 -159755965 + AluSx SINE Alu 1 299 -13 244 345 0 24 chr5 39875718 39875802 -159754348 - L2 LINE L2 -42 3230 3149 1093 283 120 18 chr5 39879501 39879942 -159750208 - LTR33 LTR ERVL 0 521 36 404 285 24 24 chr5 39880054 39880177 -159749973 + MER5C DNA MER1_type 6 128 -196 26 0 0 0 chr5 39880344 39880370 -159749780 + AT_rich Low_complexity Low_complexity 1 26 0 307 277 24 0 chr5 39880577 39880660 -159749490 + L1ME LINE L1 91 175 -5895 1820 134 0 0 chr5 39880675 39880921 -159749229 + AluSg SINE Alu 1 246 -64 844 126 0 31 chr5 39881103 39881230 -159748920 - AluJo SINE Alu -78 234 112 857 229 200 4 chr5 39881234 39881514 -159748636 + L1MC4a LINE L1 6633 6905 -903 1992 216 96 35 chr5 39881575 39882150 -159748000 + L1MC4 LINE L1 7325 7934 -108 289 172 109 141 chr5 39882205 39882286 -159747864 + L1MC4 LINE L1 7919 7996 -46 2421 101 0 0 chr5 39882286 39882594 -159747556 - AluSg SINE Alu 0 310 3 289 172 109 141 chr5 39882594 39882640 -159747510 + L1MC4 LINE L1 7996 8042 0 23 33 0 0 chr5 39882648 39882678 -159747472 + AT_rich Low_complexity Low_complexity 1 30 0 279 231 19 46 chr5 39882962 39883070 -159747080 + MER114 LTR ERV 544 648 0 28 29 0 0 chr5 39883072 39883107 -159747043 + AT_rich Low_complexity Low_complexity 1 35 0 872 290 73 66 chr5 39883160 39883305 -159746845 + MER114 LTR ERV 1 144 -504 2483 74 3 0 chr5 39883305 39883603 -159746547 - AluSp SINE Alu -14 299 1 872 290 73 66 chr5 39883603 39884102 -159746048 + MER114 LTR ERV 144 648 0 5712 96 4 4 chr5 39884205 39884983 -159745167 - L1PA8 LINE L1 0 6172 5395 234 203 17 0 chr5 39885950 39886009 -159744141 + T-rich Low_complexity Low_complexity 2 61 0 286 250 38 0 chr5 39886574 39886654 -159743496 + MIR SINE MIR 124 206 -56 460 309 65 52 chr5 39886860 39887151 -159742999 - L3 LINE CR1 -561 1016 722 2022 105 0 83 chr5 39887183 39887507 -159742643 + AluSq SINE Alu 1 297 -16 1779 83 133 8 chr5 39887509 39887773 -159742377 + AluSg1 SINE Alu 1 297 -12 251 303 144 46 chr5 39887801 39887996 -159742154 + MIR SINE MIR 48 261 -1 30 59 0 0 chr5 39888032 39888083 -159742067 + AT_rich Low_complexity Low_complexity 1 51 0 29 0 0 0 chr5 39888108 39888137 -159742013 + AT_rich Low_complexity Low_complexity 1 29 0 195 129 0 0 chr5 39888713 39888744 -159741406 + (TC)n Simple_repeat Simple_repeat 2 32 0 563 278 86 0 chr5 39890346 39890497 -159739653 - MIR3 SINE MIR -13 195 32 570 274 46 23 chr5 39890708 39890927 -159739223 + L1ME4a LINE L1 5605 5828 -293 793 236 46 0 chr5 39890964 39891159 -159738991 - MIR SINE MIR 0 262 59 275 299 47 28 chr5 39891928 39892035 -159738115 - L2 LINE L2 -1 3271 3163 976 255 84 47 chr5 39892061 39892504 -159737646 + MLT1G3 LTR MaLR 33 587 -8 307 326 77 45 chr5 39892606 39893008 -159737142 + L2 LINE L2 2347 2761 -553 802 306 61 4 chr5 39893752 39894013 -159736137 + MLT1J LTR MaLR 56 331 -180 2531 91 45 0 chr5 39894877 39895229 -159734921 - LTR8 LTR ERV1 0 691 324 439 253 97 13 chr5 39895258 39895412 -159734738 + L1MA10 LINE L1 6165 6331 -3 247 241 26 69 chr5 39895431 39895547 -159734603 + L1P LINE L1 4895 5005 -1141 204 156 0 22 chr5 39895557 39895569 -159734581 + A-rich Low_complexity Low_complexity 2 13 -32 796 204 0 0 chr5 39895569 39895701 -159734449 + FLAM_A SINE Alu 1 132 -1 204 156 0 22 chr5 39895701 39895733 -159734417 + A-rich Low_complexity Low_complexity 13 45 0 960 135 0 0 chr5 39895951 39896084 -159734066 + FLAM_C SINE Alu 1 133 0 330 26 0 0 chr5 39896085 39896124 -159734026 + (TA)n Simple_repeat Simple_repeat 1 39 0 682 235 238 3 chr5 39896868 39897208 -159732942 + L2 LINE L2 2036 2455 -859 940 274 162 27 chr5 39897394 39897955 -159732195 + L2 LINE L2 2150 2786 -528 595 212 22 7 chr5 39897971 39898108 -159732042 + L2 LINE L2 3162 3300 -13 2225 89 7 3 chr5 39898406 39898698 -159731452 + AluSp SINE Alu 1 293 -20 817 146 15 8 chr5 39898716 39898846 -159731304 + AluJo SINE Alu 7 137 -175 246 62 0 0 chr5 39900077 39900109 -159730041 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 2549 46 13 0 chr5 39900282 39900589 -159729561 - AluY SINE Alu 0 311 1 181 319 21 49 chr5 39900764 39900908 -159729242 + L2 LINE L2 2920 3059 -213 547 260 48 78 chr5 39901160 39901429 -159728721 + MIR SINE MIR 2 262 0 1444 164 33 52 chr5 39901599 39901701 -159728449 - MER33 DNA MER1_type -2261 324 222 1564 183 0 22 chr5 39901701 39901975 -159728175 - AluJb SINE Alu -44 268 1 1444 164 33 52 chr5 39901975 39902202 -159727948 - MER33 DNA MER1_type -2363 222 1 238 304 88 29 chr5 39902314 39902416 -159727734 + MIR SINE MIR 30 137 -71 2018 87 11 0 chr5 39902556 39902821 -159727329 - AluSg SINE Alu -11 299 32 974 112 0 28 chr5 39902861 39903024 -159727126 - AluSp SINE Alu 0 303 145 191 327 53 44 chr5 39904955 39905068 -159725082 - L2 LINE L2 -18 3295 3182 239 354 0 49 chr5 39905320 39905464 -159724686 + MIR SINE MIR 80 216 -46 196 293 73 0 chr5 39906276 39906358 -159723792 - L2 LINE L2 -32 3240 3153 180 239 87 0 chr5 39906485 39906531 -159723619 + L2 LINE L2 3223 3272 0 209 250 21 0 chr5 39908202 39908250 -159721900 - L2 LINE L2 -86 3227 3179 21 0 0 0 chr5 39908757 39908778 -159721372 + AT_rich Low_complexity Low_complexity 1 21 0 741 240 62 61 chr5 39912790 39913062 -159717088 - MIR SINE MIR 0 262 8 180 0 0 0 chr5 39914132 39914152 -159715998 + (A)n Simple_repeat Simple_repeat 1 20 0 279 79 0 0 chr5 39914935 39914973 -159715177 + (CA)n Simple_repeat Simple_repeat 1 38 0 216 67 0 0 chr5 39915057 39915087 -159715063 + (CA)n Simple_repeat Simple_repeat 1 30 0 1396 164 4 35 chr5 39915220 39915507 -159714643 + AluJb SINE Alu 51 329 0 629 213 148 20 chr5 39915510 39915712 -159714438 - MIR SINE MIR -21 241 14 235 243 14 43 chr5 39916888 39916958 -159713192 + MIR SINE MIR 2 69 -193 412 241 179 25 chr5 39918022 39918184 -159711966 + MIR3 SINE MIR 16 202 -6 297 75 0 0 chr5 39918238 39918278 -159711872 + (TTTTG)n Simple_repeat Simple_repeat 3 42 0 2191 92 0 0 chr5 39918793 39919075 -159711075 + AluSg1 SINE Alu 7 288 -21 198 0 0 0 chr5 39920288 39920310 -159709840 + (T)n Simple_repeat Simple_repeat 1 22 0 960 245 140 30 chr5 39920482 39920853 -159709297 - L1MC4a LINE L1 -1851 5957 5546 1403 177 117 0 chr5 39922230 39922496 -159707654 + AluJo SINE Alu 1 297 -15 241 270 9 135 chr5 39922820 39922931 -159707219 - MIR3 SINE MIR -15 193 97 389 266 63 38 chr5 39922937 39923095 -159707055 + MIR SINE MIR 34 195 -67 1020 260 116 50 chr5 39923500 39923784 -159706366 - L2 LINE L2 -1 3312 3048 2229 105 0 0 chr5 39923784 39924078 -159706072 - AluSx SINE Alu -18 294 1 1020 260 116 50 chr5 39924078 39924472 -159705678 - L2 LINE L2 -265 3048 2587 272 295 71 54 chr5 39924486 39924598 -159705552 - MIR SINE MIR -59 149 36 614 64 65 2 chr5 39924711 39924803 -159705347 + MLT1E LTR MaLR 80 169 -424 2136 107 3 31 chr5 39925700 39926017 -159704133 + AluSg SINE Alu 1 308 -2 197 277 119 10 chr5 39926473 39926574 -159703576 + MIR SINE MIR 3 114 -148 382 225 11 11 chr5 39926590 39926679 -159703471 + MIR SINE MIR 69 157 -105 402 257 34 73 chr5 39927181 39927302 -159702848 + MIR SINE MIR 16 138 -124 2165 128 3 0 chr5 39927302 39927606 -159702544 + AluSx SINE Alu 1 305 -7 402 257 34 73 chr5 39927606 39927680 -159702470 + MIR SINE MIR 138 213 -49 313 330 52 19 chr5 39929720 39929932 -159700218 + L1ME LINE L1 5609 5827 -294 722 281 74 4 chr5 39930060 39930291 -159699859 + MIR SINE MIR 13 259 -3 201 74 0 0 chr5 39931684 39931711 -159698439 + (T)n Simple_repeat Simple_repeat 1 27 0 314 171 29 14 chr5 39934295 39934365 -159695785 - Charlie8 DNA MER1_type -2003 414 344 263 167 45 30 chr5 39934466 39934532 -159695618 - Charlie8 DNA MER1_type -2256 161 95 295 122 232 37 chr5 39935752 39935834 -159694316 - L2 LINE L2 0 3313 3216 989 207 194 45 chr5 39936049 39936262 -159693888 + MER113 DNA MER1_type? 61 241 -280 2211 116 0 0 chr5 39936262 39936599 -159693551 + AluSx SINE Alu 1 337 0 989 207 194 45 chr5 39936599 39936784 -159693366 + MER113 DNA MER1_type? 241 521 0 224 340 124 0 chr5 39936802 39936899 -159693251 - L3 LINE CR1 -79 1498 1390 315 256 273 0 chr5 39937492 39937613 -159692537 + MIR SINE MIR 106 259 -3 462 18 0 0 chr5 39938326 39938381 -159691769 + (TG)n Simple_repeat Simple_repeat 2 56 0 386 266 70 31 chr5 39938455 39938583 -159691567 - L2 LINE L2 -4 3268 3136 832 121 24 12 chr5 39938749 39938914 -159691236 + CT-rich Low_complexity Low_complexity 2 168 0 181 260 62 52 chr5 39939115 39939211 -159690939 - L3 LINE CR1 -27 1550 1454 474 256 267 39 chr5 39939238 39939601 -159690549 - L3 LINE CR1 -218 1359 914 442 292 8 8 chr5 39940163 39940283 -159689867 - MER5B DNA MER1_type -56 122 3 267 311 80 71 chr5 39940360 39940585 -159689565 + L2 LINE L2 3015 3241 -31 2386 83 0 0 chr5 39940964 39941264 -159688886 - AluSg SINE Alu -10 300 1 785 251 68 0 chr5 39941431 39941622 -159688528 + MIR SINE MIR 38 241 -21 350 324 81 16 chr5 39941765 39941950 -159688200 - L1ME LINE L1 -362 5759 5563 336 48 0 0 chr5 39943274 39943316 -159686834 + (CA)n Simple_repeat Simple_repeat 2 43 0 2352 153 3 5 chr5 39944832 39945212 -159684938 - L1MB8 LINE L1 0 6178 5800 234 125 0 0 chr5 39945245 39945277 -159684873 + L1ME LINE L1 5774 5805 -361 2341 162 56 54 chr5 39945304 39945841 -159684309 - L1MB8 LINE L1 -382 5802 5265 2024 93 0 63 chr5 39946003 39946349 -159683801 + AluSg SINE Alu 1 327 0 573 150 20 0 chr5 39946791 39946891 -159683259 + L1MB2 LINE L1 6067 6168 -3 2121 108 16 7 chr5 39947610 39947915 -159682235 - AluSg1 SINE Alu -1 308 1 2225 106 3 17 chr5 39951356 39951657 -159678493 + AluSp SINE Alu 6 302 -11 366 186 78 142 chr5 39952579 39952966 -159677184 - L1MC5 LINE L1 -236 7725 7364 228 67 0 0 chr5 39953442 39953472 -159676678 + (A)n Simple_repeat Simple_repeat 1 30 0 267 277 69 19 chr5 39953877 39954036 -159676114 + L2 LINE L2 2953 3119 -153 267 31 0 0 chr5 39954615 39954647 -159675503 + (CA)n Simple_repeat Simple_repeat 1 32 0 180 247 309 12 chr5 39956008 39956062 -159674088 + L2 LINE L2 3150 3254 -18 182 148 0 0 chr5 39956062 39956089 -159674061 + MIR SINE MIR 224 250 -12 2265 106 7 0 chr5 39956141 39956442 -159673708 - AluSg SINE Alu -7 303 1 456 270 23 16 chr5 39958504 39958657 -159671493 - MIR SINE MIR -63 145 19 232 176 39 0 chr5 39959060 39959111 -159671039 - L2 LINE L2 -2 3270 3218 1478 289 113 17 chr5 39959717 39960257 -159669893 + L3 LINE CR1 533 1124 -453 231 354 87 34 chr5 39960283 39960489 -159669661 - L2 LINE L2 -8 3264 3048 220 311 66 54 chr5 39960679 39961004 -159669146 + L3 LINE CR1 1106 1470 -107 586 235 138 28 chr5 39961439 39961656 -159668494 + MIR SINE MIR 1 241 -21 283 253 95 11 chr5 39961828 39961923 -159668227 - MIR SINE MIR -149 113 11 244 212 0 71 chr5 39963200 39963299 -159666851 + CT-rich Low_complexity Low_complexity 4 95 0 2319 94 0 0 chr5 39963438 39963735 -159666415 + AluSx SINE Alu 9 305 -7 2104 84 6 81 chr5 39965506 39965841 -159664309 - AluSx SINE Alu -2 310 1 2135 120 3 3 chr5 39966425 39966733 -159663417 - AluSq SINE Alu -5 308 1 800 221 32 42 chr5 39966783 39967000 -159663150 + MER112 DNA MER1_type 1 215 -45 548 217 36 14 chr5 39967585 39967723 -159662427 - L2 LINE L2 -6 3307 3167 715 266 137 13 chr5 39967882 39968115 -159662035 - MIR SINE MIR 0 262 1 558 259 36 7 chr5 39969809 39969948 -159660202 + MIR SINE MIR 49 191 -71 230 180 0 20 chr5 39972949 39972999 -159657151 + (CA)n Simple_repeat Simple_repeat 2 50 0 190 103 0 0 chr5 39973979 39974008 -159656142 - MIR3 SINE MIR -32 176 148 560 235 82 47 chr5 39974526 39974696 -159655454 - LTR33 LTR ERVL -345 176 1 302 308 48 0 chr5 39975593 39975697 -159654453 - MIR3 SINE MIR -33 175 67 363 286 134 49 chr5 39976872 39977096 -159653054 - MIR SINE MIR -7 255 13 189 301 48 24 chr5 39978653 39978736 -159651414 - MIR SINE MIR -73 189 105 501 235 20 0 chr5 39978803 39978905 -159651245 - HAL1 LINE L1 -2399 108 5 249 33 0 0 chr5 39978940 39978970 -159651180 + (TG)n Simple_repeat Simple_repeat 2 31 0 261 97 97 0 chr5 39979107 39979169 -159650981 - L1ME4a LINE L1 -31 6090 6023 777 285 78 22 chr5 39979767 39980125 -159650025 - L2 LINE L2 -5 3308 2931 607 213 51 15 chr5 39981171 39981368 -159648782 - MER113 DNA MER1_type? -286 235 32 2213 110 7 0 chr5 39982936 39983235 -159646915 + AluSx SINE Alu 1 301 -11 311 227 192 61 chr5 39984318 39984547 -159645603 - L1MC4 LINE L1 -176 7866 7608 251 179 30 60 chr5 39984828 39984895 -159645255 - MLT1J LTR MaLR -28 483 419 469 231 128 0 chr5 39985048 39985165 -159644985 - MLT1J LTR MaLR -312 199 68 238 281 94 23 chr5 39985555 39985683 -159644467 + MIR SINE MIR 121 257 -5 1927 163 3 0 chr5 39985727 39986022 -159644128 + AluSx SINE Alu 1 296 -16 275 347 68 0 chr5 39987118 39987265 -159642885 + MIR SINE MIR 82 238 -24 1238 171 29 154 chr5 39987319 39987569 -159642581 - Charlie1b DNA MER1_type -2271 490 332 2358 98 3 0 chr5 39987569 39987876 -159642274 - AluSq SINE Alu -5 308 1 1238 171 29 154 chr5 39987876 39988108 -159642042 - Charlie1b DNA MER1_type -2429 332 73 493 229 16 0 chr5 39989127 39989249 -159640901 + MIR3 SINE MIR 82 205 -3 1763 95 117 26 chr5 39991857 39992130 -159638020 - AluJo SINE Alu -14 298 1 423 147 53 0 chr5 39993288 39993363 -159636787 - MER53 DNA DNA 0 189 111 238 108 27 0 chr5 39993405 39993442 -159636708 - MER53 DNA DNA -151 38 1 202 238 0 0 chr5 39993789 39993831 -159636319 + T-rich Low_complexity Low_complexity 5 46 0 275 264 45 27 chr5 39994920 39995030 -159635120 + MIR SINE MIR 118 229 -33 827 133 28 133 chr5 39995800 39995945 -159634205 + MER5A DNA MER1_type 1 119 -70 854 201 6 6 chr5 39995945 39996109 -159634041 - FAM SINE Alu -11 164 1 827 133 28 133 chr5 39996109 39996174 -159633976 + MER5A DNA MER1_type 119 189 0 419 245 81 2 chr5 39996185 39996348 -159633802 + MIR SINE MIR 19 192 -70 996 184 40 93 chr5 39996581 39996859 -159633291 + MLT1B LTR MaLR 1 263 -127 966 176 0 0 chr5 39997169 39997322 -159632828 + FRAM SINE Alu 1 153 -23 237 65 0 0 chr5 39997355 39997386 -159632764 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 244 292 67 0 chr5 39997403 39997492 -159632658 - MIR SINE MIR -80 182 88 2547 56 0 3 chr5 39997639 39997944 -159632206 - AluY SINE Alu -7 304 1 461 219 256 6 chr5 39997944 39998108 -159632042 - MER112 DNA MER1_type -1 259 55 185 194 0 0 chr5 39998891 39998927 -159631223 - L2 LINE L2 -970 2344 2309 523 290 91 26 chr5 39999034 39999265 -159630885 - MIR SINE MIR 0 262 17 705 293 107 4 chr5 39999300 39999525 -159630625 - MIR SINE MIR 0 262 15 188 286 63 48 chr5 39999849 39999975 -159630175 + L2 LINE L2 2717 2844 -470 229 273 222 15 chr5 40000141 40000339 -159629811 + L2 LINE L2 2985 3223 -49 185 139 23 0 chr5 40000359 40000402 -159629748 + (TA)n Simple_repeat Simple_repeat 1 44 0 278 294 58 0 chr5 40000480 40000594 -159629556 - MER20B DNA MER1_type -17 202 81 21 71 0 0 chr5 40002408 40002450 -159627700 + AT_rich Low_complexity Low_complexity 1 42 0 800 204 0 19 chr5 40002450 40002612 -159627538 - MER3 DNA MER1_type -86 123 12 1685 168 10 16 chr5 40002768 40003071 -159627079 + AluJb SINE Alu 3 303 -9 694 272 43 39 chr5 40003535 40003767 -159626383 + MIR SINE MIR 24 256 -6 189 260 39 39 chr5 40003802 40003879 -159626271 + MIR SINE MIR 27 103 -159 1526 230 91 34 chr5 40004879 40005353 -159624797 - MLT1D LTR MaLR 0 505 5 234 0 0 0 chr5 40006353 40006379 -159623771 + (TAA)n Simple_repeat Simple_repeat 2 27 0 264 293 0 0 chr5 40006577 40006659 -159623491 + MIR SINE MIR 168 249 -13 1390 187 138 59 chr5 40008630 40009037 -159621113 + MLT1D LTR MaLR 4 442 -63 699 230 29 6 chr5 40009116 40009290 -159620860 - MER5B DNA MER1_type 0 178 1 419 311 55 0 chr5 40009529 40009693 -159620457 - LTR67 LTR ERVL -3 554 382 962 287 25 102 chr5 40010484 40011006 -159619144 - ERVL LTR ERVL -331 5433 4952 656 181 0 39 chr5 40011006 40011133 -159619017 + L1MC4 LINE L1 7390 7511 -531 624 290 77 39 chr5 40011133 40011471 -159618679 - ERVL LTR ERVL -1639 4125 3775 1364 269 53 10 chr5 40011757 40012170 -159617980 - ERVL LTR ERVL -2304 3350 2920 1196 88 132 28 chr5 40012172 40012354 -159617796 - AluSc SINE Alu -10 299 99 1472 324 89 9 chr5 40012358 40013035 -159617115 - ERVL LTR ERVL -2808 2956 2226 727 316 78 4 chr5 40013174 40013430 -159616720 - ERVL LTR ERVL -3715 2049 1775 672 324 68 18 chr5 40013578 40014268 -159615882 - ERVL LTR ERVL -4204 1560 815 355 372 45 24 chr5 40014308 40014598 -159615552 - ERVL LTR ERVL -5061 703 408 302 306 81 25 chr5 40014967 40015127 -159615023 - LTR67 LTR ERVL -6 551 383 2296 118 0 3 chr5 40016495 40016808 -159613342 - AluSx SINE Alu 0 312 1 189 214 0 0 chr5 40017672 40017714 -159612436 + (CA)n Simple_repeat Simple_repeat 1 42 0 2595 59 0 3 chr5 40017860 40018165 -159611985 - AluY SINE Alu -7 304 1 242 239 15 15 chr5 40018166 40018233 -159611917 + MIR SINE MIR 116 182 -80 417 281 26 0 chr5 40018789 40018903 -159611247 - MER5A DNA MER1_type 0 189 73 356 302 62 8 chr5 40018904 40019033 -159611117 - MER91C DNA MER1_type -1 139 4 2234 127 0 3 chr5 40019118 40019425 -159610725 + AluSx SINE Alu 1 306 -6 672 304 40 37 chr5 40020379 40020701 -159609449 + LTR16C LTR ERVL 156 478 -13 246 296 107 15 chr5 40020935 40021131 -159609019 - MIR SINE MIR -13 249 36 187 327 0 0 chr5 40021452 40021507 -159608643 + L2 LINE L2 3251 3305 -8 308 333 9 0 chr5 40022174 40022279 -159607871 + MER5A DNA MER1_type 1 106 -83 862 178 22 6 chr5 40024844 40025024 -159605126 + MIR SINE MIR 18 200 -62 1740 142 14 18 chr5 40025798 40026080 -159604070 + AluJo SINE Alu 32 312 0 195 280 168 16 chr5 40027147 40027272 -159602878 + L2 LINE L2 2550 2693 -621 397 137 0 27 chr5 40027617 40027690 -159602460 - LTR16C LTR ERVL 0 491 421 280 261 0 0 chr5 40027677 40027742 -159602408 + LTR16A1 LTR ERVL 372 436 -21 * 273 306 66 41 chr5 40028552 40028673 -159601477 - MIR SINE MIR -84 124 1 198 71 0 0 chr5 40028840 40028868 -159601282 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 962 234 133 71 chr5 40028868 40029320 -159600830 - L2 LINE L2 -13 3300 2821 2433 53 0 17 chr5 40029909 40030208 -159599942 + AluY SINE Alu 1 294 -17 285 283 127 24 chr5 40030595 40030761 -159599389 + MIR SINE MIR 6 188 -74 435 266 130 11 chr5 40031833 40032010 -159598140 + MIR SINE MIR 21 218 -44 289 200 126 21 chr5 40032077 40032172 -159597978 - MIR SINE MIR -93 169 65 207 0 0 0 chr5 40032348 40032371 -159597779 + (A)n Simple_repeat Simple_repeat 1 23 0 186 133 0 0 chr5 40032427 40032457 -159597693 + (TTA)n Simple_repeat Simple_repeat 3 32 0 186 241 86 17 chr5 40032917 40032975 -159597175 + L2 LINE L2 3173 3234 -38 294 234 109 80 chr5 40033509 40033684 -159596466 - MIR SINE MIR 0 262 83 649 253 50 25 chr5 40033696 40033898 -159596252 - MIR SINE MIR 0 262 56 477 204 191 7 chr5 40033908 40034055 -159596095 - MIR SINE MIR 0 262 89 205 351 0 0 chr5 40034144 40034201 -159595949 - MIR SINE MIR -186 76 20 353 293 180 15 chr5 40034504 40034722 -159595428 - MIR SINE MIR 0 262 17 21 0 0 0 chr5 40034851 40034872 -159595278 + AT_rich Low_complexity Low_complexity 1 21 0 2155 115 7 7 chr5 40035000 40035295 -159594855 - AluSx SINE Alu -17 295 1 329 0 24 0 chr5 40035375 40035416 -159594734 + (CA)n Simple_repeat Simple_repeat 2 43 0 1880 160 0 7 chr5 40035785 40036079 -159594071 + AluJo SINE Alu 1 292 -20 22 0 0 0 chr5 40039248 40039270 -159590880 + AT_rich Low_complexity Low_complexity 1 22 0 858 273 12 24 chr5 40039305 40039554 -159590596 - MIR SINE MIR -12 250 5 338 311 8 17 chr5 40040257 40040376 -159589774 + MIR SINE MIR 3 120 -142 1721 150 0 69 chr5 40040430 40040769 -159589381 - AluJb SINE Alu 0 318 1 428 183 42 78 chr5 40040875 40041017 -159589133 + L2 LINE L2 2919 3055 -217 449 289 14 35 chr5 40041237 40041379 -159588771 + L2 LINE L2 3134 3272 0 394 219 148 16 chr5 40041384 40041512 -159588638 + MIR SINE MIR 106 250 -12 203 220 17 34 chr5 40041967 40042026 -159588124 + (CAGAGA)n Simple_repeat Simple_repeat 3 60 0 191 270 9 130 chr5 40042027 40042142 -159588008 - L2 LINE L2 -97 3175 3075 266 298 29 10 chr5 40042191 40042295 -159587855 - L3b LINE CR1 -217 1366 1261 2093 140 89 6 chr5 40043095 40043453 -159586697 - MLT1B LTR MaLR 0 390 3 239 367 0 8 chr5 40043576 40043704 -159586446 + L2 LINE L2 2211 2337 -977 923 240 9 14 chr5 40044545 40044774 -159585376 - MIR SINE MIR 0 262 37 1907 190 49 57 chr5 40044884 40045390 -159584760 + MLT1D LTR MaLR 1 502 -3 446 286 8 8 chr5 40046322 40046455 -159583695 + MIR SINE MIR 2 134 -128 211 231 0 19 chr5 40046787 40046839 -159583311 - MIR SINE MIR -161 101 51 346 202 210 8 chr5 40047996 40048120 -159582030 + MER5A DNA MER1_type 41 189 0 200 241 17 0 chr5 40048531 40048589 -159581561 + (TA)n Simple_repeat Simple_repeat 2 60 0 270 250 0 52 chr5 40049214 40049310 -159580840 + L2 LINE L2 3213 3303 -10 7577 30 14 0 chr5 40049655 40050611 -159579539 + L1PA4 LINE L1 5185 6152 -3 24 0 0 0 chr5 40050611 40050635 -159579515 + AT_rich Low_complexity Low_complexity 1 24 0 489 250 136 59 chr5 40050688 40050924 -159579226 - MIR SINE MIR -1 261 8 753 239 160 52 chr5 40051136 40051442 -159578708 + LTR16C LTR ERVL 153 491 0 1769 175 7 10 chr5 40052498 40052795 -159577355 + AluJb SINE Alu 1 296 -16 2157 106 7 13 chr5 40052797 40053100 -159577050 + AluSg SINE Alu 1 301 -9 2235 113 7 0 chr5 40053768 40054068 -159576082 - AluSx SINE Alu -9 303 2 373 273 75 117 chr5 40054208 40054543 -159575607 + LTR67 LTR ERVL 3 318 -239 2916 79 72 10 chr5 40054543 40054916 -159575234 + MLT2A1 LTR ERVL 3 406 -38 549 0 0 0 chr5 40054916 40054977 -159575173 + (TA)n Simple_repeat Simple_repeat 2 62 0 2916 79 72 10 chr5 40054977 40055019 -159575131 + MLT2A1 LTR ERVL 406 444 0 373 273 75 117 chr5 40055019 40055112 -159575038 + LTR67 LTR ERVL 318 413 -144 21 0 0 0 chr5 40055435 40055456 -159574694 + AT_rich Low_complexity Low_complexity 1 21 0 272 246 69 54 chr5 40055860 40055990 -159574160 - MIR SINE MIR -15 247 116 197 33 33 0 chr5 40056177 40056207 -159573943 + (CA)n Simple_repeat Simple_repeat 1 31 0 187 244 0 0 chr5 40058127 40058168 -159571982 - MIR SINE MIR -124 138 98 273 259 42 167 chr5 40058981 40059244 -159570906 + L2 LINE L2 3016 3245 -27 204 340 49 64 chr5 40059258 40059461 -159570689 - L2 LINE L2 -1950 1364 1165 2291 205 93 76 chr5 40059872 40060507 -159569643 + MLT1E1 LTR MaLR 1 646 -8 2141 148 25 15 chr5 40060986 40061384 -159568766 + L1MA6 LINE L1 5890 6291 -9 641 177 122 83 chr5 40061457 40061638 -159568512 + MER20 DNA MER1_type 27 214 -5 16552 109 22 10 chr5 40061820 40064207 -159565943 - Tigger1 DNA MER2_type 0 2418 2 942 227 34 51 chr5 40064488 40064581 -159565569 - LTR16A1 LTR ERVL 0 457 364 2684 161 31 2 chr5 40064581 40065033 -159565117 - MLT1C LTR MaLR -2 465 1 942 227 34 51 chr5 40065033 40065234 -159564916 - LTR16A1 LTR ERVL -93 364 168 529 133 92 0 chr5 40065324 40065422 -159564728 - MER5A DNA MER1_type -52 137 31 225 100 0 0 chr5 40065422 40065452 -159564698 - Charlie1 DNA MER1_type -2731 30 1 329 164 86 103 chr5 40065456 40065572 -159564578 - LTR16A1 LTR ERVL -332 125 12 302 254 100 15 chr5 40065607 40065737 -159564413 - L2 LINE L2 -2874 440 300 884 145 0 0 chr5 40066669 40066793 -159563357 + FLAM_C SINE Alu 1 124 -19 381 22 0 0 chr5 40067398 40067444 -159562706 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 1510 154 0 98 chr5 40067473 40067791 -159562359 - AluJb SINE Alu -25 287 1 236 183 32 75 chr5 40067926 40068019 -159562131 - L1ME4a LINE L1 -49 6072 5984 528 212 71 0 chr5 40068058 40068171 -159561979 + MIR SINE MIR 3 123 -139 2002 201 68 27 chr5 40068705 40069188 -159560962 - MLT1D LTR MaLR 0 505 3 1174 248 164 24 chr5 40070673 40071141 -159559009 - MLT1H1 LTR MaLR -7 548 15 393 306 64 0 chr5 40071190 40071347 -159558803 + MLT1L LTR MaLR 447 613 -2 216 0 0 0 chr5 40071741 40071765 -159558385 + (A)n Simple_repeat Simple_repeat 1 24 0 198 213 21 21 chr5 40071847 40071894 -159558256 - MER5C DNA MER1_type -263 61 15 214 310 0 0 chr5 40071948 40072006 -159558144 - L3b LINE CR1 -131 1452 1395 524 228 79 50 chr5 40072364 40072605 -159557545 - MLT1J LTR MaLR -35 476 229 2257 123 15 33 chr5 40072761 40073067 -159557083 - MLT1B LTR MaLR 0 390 91 2295 128 31 17 chr5 40073067 40073425 -159556725 - THE1B LTR MaLR -1 363 1 2257 123 15 33 chr5 40073425 40073515 -159556635 - MLT1B LTR MaLR -299 91 1 776 290 48 0 chr5 40075057 40075309 -159554841 + HERVL LTR ERVL 2833 3096 -2558 304 282 0 45 chr5 40075405 40075515 -159554635 + HERVL LTR ERVL 3269 3373 -2391 1708 232 37 35 chr5 40075534 40075570 -159554580 - MLT1D LTR MaLR -14 491 457 1802 219 45 16 chr5 40075570 40076058 -159554092 + MLT1D LTR MaLR 1 502 -3 1708 232 37 35 chr5 40076058 40076509 -159553641 - MLT1D LTR MaLR -48 457 3 2057 147 0 13 chr5 40076548 40076861 -159553289 - AluSx SINE Alu -3 309 1 1307 278 78 27 chr5 40076863 40077427 -159552723 + HERVL LTR ERVL 3384 3976 -1788 568 241 28 0 chr5 40077432 40077573 -159552577 + MLT1G1 LTR MaLR 1 145 -450 1230 108 69 68 chr5 40077608 40078020 -159552130 + MER51A LTR ERV1 1 634 0 1176 237 128 6 chr5 40078021 40078380 -159551770 + MLT1G1 LTR MaLR 180 582 -13 1050 300 109 2 chr5 40078392 40078852 -159551298 + HERVL LTR ERVL 3981 4489 -1275 2126 110 0 20 chr5 40078983 40079282 -159550868 + AluSq SINE Alu 1 293 -20 2511 249 42 14 chr5 40079399 40080114 -159550036 + L1MEc LINE L1 49 783 -5613 189 0 0 0 chr5 40080196 40080217 -159549933 + (T)n Simple_repeat Simple_repeat 1 21 0 2776 206 2 58 chr5 40080612 40081213 -159548937 - MLT1F1 LTR MaLR 0 567 1 269 213 66 0 chr5 40083277 40083338 -159546812 - L2 LINE L2 -4 3309 3245 23 0 0 0 chr5 40083468 40083491 -159546659 + AT_rich Low_complexity Low_complexity 1 23 0 305 277 43 0 chr5 40084156 40084250 -159545900 - MIR SINE MIR -29 233 136 350 102 0 0 chr5 40084257 40084329 -159545821 - Alu SINE Alu 0 306 235 321 219 158 0 chr5 40084598 40084712 -159545438 + Charlie4a DNA MER1_type 138 269 -239 4366 175 149 65 chr5 40084712 40086278 -159543872 + pTR5 LTR ERV1 742 2438 0 1014 183 20 48 chr5 40086278 40086301 -159543849 + Charlie4a DNA MER1_type 264 286 -1675 2527 104 31 8 chr5 40086301 40086687 -159543463 + MER48 LTR ERV1 1 395 -3 1014 183 20 48 chr5 40086687 40086915 -159543235 + Charlie4a DNA MER1_type 286 508 0 234 286 39 0 chr5 40087022 40087099 -159543051 + MLT1J LTR MaLR 274 353 -158 1810 139 114 18 chr5 40087316 40087648 -159542502 - THE1B LTR MaLR 0 364 1 184 349 89 77 chr5 40088225 40088460 -159541690 + L2 LINE L2 2940 3177 -95 687 279 37 40 chr5 40089272 40089544 -159540606 - LTR16C LTR ERVL 0 491 221 2021 162 0 0 chr5 40089587 40089883 -159540267 + AluJb SINE Alu 1 296 -16 233 176 20 0 chr5 40091270 40091321 -159538829 - MLT2F LTR ERVL 0 663 612 228 135 0 0 chr5 40091328 40091365 -159538785 + (TG)n Simple_repeat Simple_repeat 1 37 0 771 165 61 30 chr5 40091567 40091731 -159538419 - MLT1E3 LTR MaLR -393 231 63 463 281 14 7 chr5 40091744 40091890 -159538260 - MLT2F LTR ERVL -516 147 1 2453 153 22 7 chr5 40092281 40092737 -159537413 - L1MB3 LINE L1 -2 6181 5719 1091 131 24 34 chr5 40092739 40092945 -159537205 - L1MB3 LINE L1 -528 5643 5440 313 203 76 114 chr5 40093300 40093458 -159536692 - MLT1H LTR MaLR -243 306 155 28 29 0 0 chr5 40095467 40095502 -159534648 + AT_rich Low_complexity Low_complexity 1 35 0 1697 161 6 46 chr5 40095794 40096117 -159534033 + AluJo SINE Alu 1 310 -2 198 0 0 0 chr5 40097293 40097315 -159532835 + (TG)n Simple_repeat Simple_repeat 2 23 0 1795 108 4 0 chr5 40097507 40097766 -159532384 - L1PB1 LINE L1 -13 6138 5879 1632 164 36 11 chr5 40097943 40098217 -159531933 + AluJo SINE Alu 12 292 -20 596 276 103 13 chr5 40098483 40098841 -159531309 - LTR33A LTR ERVL 0 523 135 1349 209 100 31 chr5 40098858 40099048 -159531102 - MLT1A2 LTR MaLR 0 374 198 198 0 0 0 chr5 40099048 40099070 -159531080 + (GA)n Simple_repeat Simple_repeat 1 22 0 1349 209 100 31 chr5 40099070 40099229 -159530921 - MLT1A2 LTR MaLR -176 198 1 401 286 100 14 chr5 40099326 40099466 -159530684 - MIR SINE MIR -79 183 32 2262 110 0 0 chr5 40099683 40099982 -159530168 + AluSx SINE Alu 2 300 -12 397 325 162 4 chr5 40100634 40100868 -159529282 + L2 LINE L2 758 1028 -2286 25 0 0 0 chr5 40101077 40101102 -159529048 + AT_rich Low_complexity Low_complexity 1 25 0 485 147 20 29 chr5 40101243 40101345 -159528805 - MLT1I LTR MaLR 0 409 309 323 352 0 9 chr5 40101635 40101740 -159528410 - L1ME LINE L1 -379 5791 5688 251 333 36 0 chr5 40101742 40101853 -159528297 - MIR SINE MIR 0 262 148 274 346 122 10 chr5 40102175 40102470 -159527680 + LTR16C LTR ERVL 156 483 -8 718 290 103 38 chr5 40102484 40102714 -159527436 + LTR16A LTR ERVL 16 284 -166 2454 145 52 5 chr5 40102714 40103121 -159527029 + MSTB LTR MaLR 1 426 0 718 290 103 38 chr5 40103121 40103286 -159526864 + LTR16A LTR ERVL 284 437 -13 299 321 80 11 chr5 40103695 40103882 -159526268 + ERVL LTR ERVL 4462 4661 -1103 1395 151 35 8 chr5 40103886 40104145 -159526005 + L1MB4 LINE L1 5915 6180 0 22 0 0 0 chr5 40104239 40104261 -159525889 + AT_rich Low_complexity Low_complexity 1 22 0 1964 148 0 23 chr5 40104283 40104588 -159525562 - AluSg SINE Alu -12 298 1 436 172 20 0 chr5 40106526 40106625 -159523525 - L1MA10 LINE L1 -9 6325 6225 4413 190 89 124 chr5 40106626 40106719 -159523431 - L1ME LINE L1 -595 5571 5476 1689 182 90 27 chr5 40106719 40107120 -159523030 + MSTC LTR MaLR 3 428 0 4413 190 89 124 chr5 40107120 40107142 -159523008 - L1ME LINE L1 -690 5476 5455 2545 72 3 0 chr5 40107142 40107449 -159522701 + AluSp SINE Alu 1 308 -5 4413 190 89 124 chr5 40107449 40108308 -159521842 - L1ME LINE L1 -711 5455 4567 1319 180 16 25 chr5 40108308 40108553 -159521597 - AluJb SINE Alu -69 243 1 4413 190 89 124 chr5 40108553 40109860 -159520290 - L1ME LINE L1 -1599 4567 3152 764 241 79 0 chr5 40109857 40110085 -159520065 - L1ME LINE L1 -3493 2653 2408 * 21 0 0 0 chr5 40110102 40110123 -159520027 + AT_rich Low_complexity Low_complexity 1 21 0 219 269 356 0 chr5 40110145 40110249 -159519901 + MIR3 SINE MIR 34 174 -34 28 61 0 0 chr5 40110469 40110518 -159519632 + AT_rich Low_complexity Low_complexity 1 49 0 265 197 14 0 chr5 40110646 40110717 -159519433 - L1M4 LINE L1 -3257 2889 2818 472 248 26 9 chr5 40110719 40110832 -159519318 - MIR SINE MIR -146 116 2 2016 173 9 3 chr5 40111123 40111465 -159518685 + MER2 DNA MER2_type 1 344 0 2289 95 3 13 chr5 40111537 40111853 -159518297 - AluSp SINE Alu 0 313 1 463 321 166 33 chr5 40112034 40112395 -159517755 - MLT1K LTR MaLR -18 570 162 1506 157 196 35 chr5 40112759 40112955 -159517195 + MLT1C LTR MaLR 1 164 -303 1979 131 70 12 chr5 40112955 40113284 -159516866 - MER7A DNA MER2_type 0 346 1 1506 157 196 35 chr5 40113284 40113489 -159516661 + MLT1C LTR MaLR 164 467 0 14168 32 10 1 chr5 40113627 40116115 -159514035 + L1PA4 LINE L1 3634 6155 0 246 250 0 33 chr5 40116468 40116528 -159513622 + L2 LINE L2 3146 3203 -69 216 319 72 14 chr5 40116705 40116774 -159513376 + L2 LINE L2 3151 3223 -49 325 298 67 94 chr5 40117716 40118058 -159512092 + HAL1 LINE L1 971 1303 -1204 1782 226 93 15 chr5 40118129 40118603 -159511547 + MLT1G1 LTR MaLR 85 595 0 332 283 10 0 chr5 40118913 40119012 -159511138 + L1ME3A LINE L1 5501 5600 -2395 566 303 124 3 chr5 40119016 40119306 -159510844 + L1ME3A LINE L1 5561 5885 -285 33 66 0 0 chr5 40119445 40119506 -159510644 + AT_rich Low_complexity Low_complexity 1 61 0 2075 123 48 31 chr5 40119582 40119940 -159510210 - THE1B LTR MaLR 0 364 1 22 35 0 0 chr5 40121459 40121488 -159508662 + AT_rich Low_complexity Low_complexity 1 29 0 259 228 198 0 chr5 40121737 40121838 -159508312 + MIR SINE MIR 118 238 -24 22 0 0 0 chr5 40122314 40122336 -159507814 + AT_rich Low_complexity Low_complexity 1 22 0 1356 244 85 48 chr5 40122374 40122802 -159507348 + L1MC4 LINE L1 7443 7899 -143 2380 105 0 3 chr5 40122802 40123115 -159507035 + AluSx SINE Alu 1 312 0 1356 244 85 48 chr5 40123115 40123252 -159506898 + L1MC4 LINE L1 7899 8029 -13 24 0 0 0 chr5 40123571 40123595 -159506555 + AT_rich Low_complexity Low_complexity 1 24 0 333 310 44 51 chr5 40123627 40123785 -159506365 + MIR SINE MIR 106 262 0 1005 177 68 0 chr5 40124130 40124322 -159505828 - MSTD LTR MaLR -12 384 180 6073 145 26 23 chr5 40124333 40126452 -159503698 - L1PB2 LINE L1 -3 6148 4027 230 103 10 124 chr5 40126704 40126801 -159503349 + L1MA2 LINE L1 6218 6303 -1 1807 256 75 17 chr5 40126801 40127320 -159502830 + MLT1H1 LTR MaLR 7 555 0 442 255 64 64 chr5 40127824 40127958 -159502192 + MIR SINE MIR 50 186 -76 2129 102 10 0 chr5 40127958 40128251 -159501899 + AluSq SINE Alu 1 296 -17 442 255 64 64 chr5 40128251 40128273 -159501877 + MIR SINE MIR 185 206 -56 200 219 0 24 chr5 40128370 40128411 -159501739 - L2 LINE L2 -18 3254 3215 287 85 21 0 chr5 40128997 40129044 -159501106 + (CAAAAA)n Simple_repeat Simple_repeat 1 48 0 383 263 10 25 chr5 40129045 40129452 -159500698 + GA-rich Low_complexity Low_complexity 1 401 0 9290 196 13 20 chr5 40129556 40131651 -159498499 - L1 LINE L1 -1538 4608 2527 605 254 3 0 chr5 40131661 40131806 -159498344 - MSTC LTR MaLR -217 148 1 197 283 33 0 chr5 40131806 40131866 -159498284 - L2 LINE L2 -1689 1625 1564 1709 279 11 15 chr5 40131932 40132406 -159497744 - L2 LINE L2 -1956 1358 887 1670 169 36 0 chr5 40132410 40132689 -159497461 + AluJb SINE Alu 13 301 -11 375 161 0 32 chr5 40132693 40132786 -159497364 + GA-rich Low_complexity Low_complexity 1 90 0 2016 253 76 83 chr5 40133256 40133491 -159496659 - L2 LINE L2 -2462 852 617 1677 140 32 3 chr5 40133491 40133799 -159496351 + L1MA9 LINE L1 5992 6308 -4 2016 253 76 83 chr5 40133799 40134421 -159495729 - L2 LINE L2 -2697 617 1 266 200 0 17 chr5 40134729 40134789 -159495361 - L1M4 LINE L1 -1514 4632 4574 185 231 0 0 chr5 40134803 40134842 -159495308 + L2 LINE L2 3275 3313 0 1728 144 65 44 chr5 40135748 40136115 -159494035 + THE1C LTR MaLR 1 375 0 1850 147 14 0 chr5 40136321 40136633 -159493517 - AluSx SINE Alu 0 316 1 2220 131 0 0 chr5 40136775 40137087 -159493063 + AluSx SINE Alu 1 312 0 23 0 0 0 chr5 40137087 40137110 -159493040 + AT_rich Low_complexity Low_complexity 1 23 0 2351 79 0 0 chr5 40137460 40137751 -159492399 + AluSg SINE Alu 1 291 -19 201 196 0 0 chr5 40137788 40137834 -159492316 + (CATATA)n Simple_repeat Simple_repeat 1 46 0 463 274 99 61 chr5 40139260 40139523 -159490627 + MLT1L LTR MaLR 1 273 -342 227 296 17 17 chr5 40139657 40139772 -159490378 + MLT1L LTR MaLR 497 611 -4 766 107 23 38 chr5 40139860 40139991 -159490159 + AluJo SINE Alu 5 133 -169 1995 98 16 70 chr5 40140002 40140318 -159489832 + AluSx SINE Alu 1 299 -13 445 309 13 26 chr5 40140616 40140768 -159489382 + MER5A DNA MER1_type 1 150 -39 740 277 92 15 chr5 40141832 40142103 -159488047 - MER102b DNA MER1_type -45 296 5 22 35 0 0 chr5 40142186 40142215 -159487935 + AT_rich Low_complexity Low_complexity 1 29 0 1508 164 19 7 chr5 40142809 40143127 -159487023 + MER33 DNA MER1_type 1 315 -9 248 319 237 16 chr5 40143709 40144026 -159486124 + L2 LINE L2 2805 3191 -122 208 319 0 0 chr5 40144075 40144122 -159486028 - MER91 DNA MER1_type 0 140 94 242 188 21 0 chr5 40144164 40144212 -159485938 + L2 LINE L2 3264 3312 -1 333 242 140 34 chr5 40145340 40145518 -159484632 - MIR SINE MIR -14 248 52 300 386 0 8 chr5 40145876 40146003 -159484147 + MIR SINE MIR 4 129 -133 6465 128 38 32 chr5 40146003 40146559 -159483591 - L1M1 LINE L1 -591 5712 5161 2095 152 113 0 chr5 40146559 40146941 -159483209 - MSTA LTR MaLR -3 425 1 6465 128 38 32 chr5 40146941 40147232 -159482918 - L1M1 LINE L1 -1142 5161 4873 906 210 0 0 chr5 40147232 40147394 -159482756 + AluJo SINE Alu 138 299 -3 6465 128 38 32 chr5 40147394 40148101 -159482049 - L1M1 LINE L1 -1430 4873 4157 22 56 0 0 chr5 40148907 40148943 -159481207 + AT_rich Low_complexity Low_complexity 1 36 0 2257 101 7 3 chr5 40149243 40149549 -159480601 - AluSq SINE Alu -3 310 4 872 184 0 7 chr5 40149846 40149998 -159480152 + FAM SINE Alu 1 151 -34 263 106 0 0 chr5 40150151 40150198 -159479952 + AluSp/q SINE Alu 255 301 -2 903 269 106 36 chr5 40150594 40150980 -159479170 + L2 LINE L2 2473 2885 -429 271 235 54 84 chr5 40151197 40151363 -159478787 + L2 LINE L2 3076 3236 -77 790 260 194 25 chr5 40151396 40151762 -159478388 + L2 LINE L2 2886 3313 0 189 256 0 0 chr5 40153027 40153066 -159477084 - L2 LINE L2 -604 2710 2672 22 35 0 0 chr5 40153287 40153316 -159476834 + AT_rich Low_complexity Low_complexity 1 29 0 41 0 0 19 chr5 40153412 40153445 -159476705 + AT_rich Low_complexity Low_complexity 1 34 -17 1773 155 7 7 chr5 40153445 40153729 -159476421 - AluJb SINE Alu -28 284 1 41 0 0 19 chr5 40153729 40153747 -159476403 + AT_rich Low_complexity Low_complexity 34 51 0 318 329 13 24 chr5 40153795 40153963 -159476187 + L1ME LINE L1 5550 5722 -399 420 293 63 37 chr5 40154474 40154730 -159475420 + L1ME4a LINE L1 5175 5422 -747 29945 71 8 10 chr5 40154816 40159779 -159470371 + L1PA6 LINE L1 1205 6152 -2 866 253 123 39 chr5 40159941 40160347 -159469803 + L1ME4a LINE L1 5511 5978 -143 180 111 0 0 chr5 40160347 40160374 -159469776 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 866 253 123 39 chr5 40160374 40160528 -159469622 + L1ME4a LINE L1 5978 6118 -3 1367 102 44 27 chr5 40161146 40161371 -159468779 + MER30 DNA MER1_type 1 229 -1 2083 101 16 10 chr5 40161780 40162088 -159468062 - AluSx SINE Alu -2 310 1 2151 82 0 7 chr5 40162654 40162934 -159467216 - AluSx SINE Alu -18 294 17 220 378 92 18 chr5 40163099 40163263 -159466887 - MIR3 SINE MIR -31 177 2 24 0 0 0 chr5 40163304 40163328 -159466822 + AT_rich Low_complexity Low_complexity 1 24 0 1290 151 0 32 chr5 40163793 40164012 -159466138 + AluJo SINE Alu 93 304 -8 448 258 15 8 chr5 40164130 40164262 -159465888 - MIR SINE MIR 0 262 130 1487 175 42 21 chr5 40164275 40164560 -159465590 - AluJo SINE Alu -18 294 4 220 299 45 0 chr5 40164564 40164631 -159465519 - MIR SINE MIR -106 156 87 312 70 0 0 chr5 40165156 40165199 -159464951 + (TG)n Simple_repeat Simple_repeat 1 43 0 317 250 24 0 chr5 40165622 40165706 -159464444 - L1ME4a LINE L1 -1 6120 6035 414 258 10 0 chr5 40166431 40166528 -159463622 + MER103 DNA DNA 32 129 -37 267 222 111 0 chr5 40166864 40166927 -159463223 - L2 LINE L2 -2 3270 3201 25 0 0 0 chr5 40166959 40166984 -159463166 + AT_rich Low_complexity Low_complexity 1 25 0 493 289 165 19 chr5 40167427 40167790 -159462360 - L1M4 LINE L1 -2185 3961 3546 253 219 171 29 chr5 40167876 40167981 -159462169 - L1ME4a LINE L1 -35 6086 5967 295 261 103 82 chr5 40168321 40168516 -159461634 - L2 LINE L2 0 3313 3115 741 295 62 93 chr5 40168526 40169042 -159461108 - L2 LINE L2 -386 2928 2429 1739 177 20 0 chr5 40169244 40169538 -159460612 + AluJo SINE Alu 1 300 -12 1642 97 62 0 chr5 40169721 40169948 -159460202 - AluSx SINE Alu -69 243 3 4400 163 45 37 chr5 40170780 40172062 -159458088 - L1MB8 LINE L1 0 6178 4903 1635 159 20 33 chr5 40172230 40172532 -159457618 - AluJo SINE Alu -14 298 1 1413 135 24 0 chr5 40173407 40173615 -159456535 - AluSx SINE Alu -95 217 5 2366 64 0 0 chr5 40174585 40174896 -159455254 - AluY SINE Alu 0 311 1 511 161 89 16 chr5 40175259 40175383 -159454767 + FLAM_C SINE Alu 1 133 0 2702 95 5 18 chr5 40175570 40175959 -159454191 - LTR8 LTR ERV1 -105 586 203 24 0 0 0 chr5 40176535 40176559 -159453591 + AT_rich Low_complexity Low_complexity 1 24 0 677 237 81 21 chr5 40178068 40178304 -159451846 + MER112 DNA MER1_type 11 260 0 2409 71 3 0 chr5 40178722 40179030 -159451120 + AluY SINE Alu 1 309 -2 22 35 0 0 chr5 40180296 40180325 -159449825 + AT_rich Low_complexity Low_complexity 1 29 0 213 204 23 0 chr5 40181046 40181090 -159449060 + L2 LINE L2 3264 3308 -5 323 244 233 35 chr5 40181457 40181744 -159448406 - L2 LINE L2 -3 3310 2967 241 258 45 11 chr5 40181797 40181886 -159448264 - L2 LINE L2 -509 2805 2714 186 103 0 0 chr5 40183016 40183045 -159447105 + (CGG)n Simple_repeat Simple_repeat 2 30 0 180 111 0 0 chr5 40183348 40183375 -159446775 + (GGA)n Simple_repeat Simple_repeat 1 27 0 201 39 0 0 chr5 40183559 40183585 -159446565 + (CGG)n Simple_repeat Simple_repeat 1 26 0 496 262 81 0 chr5 40187800 40187972 -159442178 - MIR SINE MIR -6 256 71 480 350 38 0 chr5 40188365 40188631 -159441519 - MARNA DNA Mariner -22 564 289 348 197 0 0 chr5 40188782 40188843 -159441307 - MIR SINE MIR -130 132 72 397 366 47 5 chr5 40188907 40189098 -159441052 - MIR SINE MIR -62 200 2 32 0 0 0 chr5 40189710 40189742 -159440408 + AT_rich Low_complexity Low_complexity 1 32 0 30 45 0 0 chr5 40190250 40190294 -159439856 + AT_rich Low_complexity Low_complexity 1 44 0 228 404 33 20 chr5 40190914 40191065 -159439085 + L2 LINE L2 3109 3261 -11 490 197 72 33 chr5 40192975 40192995 -159437155 - L1MA10 LINE L1 0 6334 6315 1548 160 86 6 chr5 40192995 40193308 -159436842 - L1ME1 LINE L1 -7 6159 5822 511 292 123 77 chr5 40193892 40194454 -159435696 + L2 LINE L2 1984 2571 -743 314 140 0 0 chr5 40195403 40195453 -159434697 + L2 LINE L2 3264 3313 0 21 0 0 0 chr5 40196115 40196136 -159434014 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 40196364 40196392 -159433758 + AT_rich Low_complexity Low_complexity 1 28 0 565 209 80 86 chr5 40196447 40196749 -159433401 - L1ME4a LINE L1 -246 5875 5576 2361 91 3 0 chr5 40197361 40197670 -159432480 + AluY SINE Alu 1 310 -1 197 333 67 0 chr5 40198003 40198108 -159432042 - L2 LINE L2 -479 2835 2724 6424 32 4 3 chr5 40198559 40199329 -159430821 + L1PA5 LINE L1 5383 6153 -1 21 0 0 0 chr5 40199653 40199674 -159430476 + AT_rich Low_complexity Low_complexity 1 21 0 194 193 18 0 chr5 40200828 40200885 -159429265 + (TA)n Simple_repeat Simple_repeat 2 59 0 4677 188 48 14 chr5 40201390 40202978 -159427172 - L1MB7 LINE L1 -38 6146 4613 1776 151 10 10 chr5 40202978 40203277 -159426873 - AluSx SINE Alu -13 299 1 4677 188 48 14 chr5 40203277 40203387 -159426763 - L1MB7 LINE L1 -1571 4613 4508 2172 116 0 3 chr5 40203387 40203679 -159426471 - AluSg SINE Alu -19 291 1 4677 188 48 14 chr5 40203679 40203798 -159426352 - L1MB7 LINE L1 -1676 4508 4265 208 250 0 19 chr5 40204262 40204314 -159425836 + GA-rich Low_complexity Low_complexity 4 54 0 317 258 41 41 chr5 40204792 40204889 -159425261 - MIR SINE MIR -131 131 35 2241 101 10 0 chr5 40204889 40205185 -159424965 - AluSp SINE Alu -13 300 2 371 252 98 35 chr5 40206433 40206507 -159423643 - MIR SINE MIR -21 241 173 976 227 147 3 chr5 40206507 40206807 -159423343 - MER2 DNA MER2_type -1 343 1 371 252 98 35 chr5 40206807 40206875 -159423275 - MIR SINE MIR -89 173 90 272 319 53 11 chr5 40206950 40207044 -159423106 + L2 LINE L2 3151 3248 -24 221 0 35 0 chr5 40207044 40207073 -159423077 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 334 353 17 92 chr5 40207161 40207319 -159422831 + L2 LINE L2 2936 3054 -218 6462 181 18 24 chr5 40207319 40207876 -159422274 - L1PA15 LINE L1 -2 6163 5604 2303 107 3 0 chr5 40207876 40208184 -159421966 - AluSp SINE Alu -4 309 1 6462 181 18 24 chr5 40208184 40209806 -159420344 - L1PA15 LINE L1 -561 5604 3990 334 353 17 92 chr5 40209806 40210007 -159420143 + L2 LINE L2 3053 3268 -4 2081 107 3 7 chr5 40210564 40210854 -159419296 + AluSg SINE Alu 1 289 -21 1570 231 95 54 chr5 40210859 40211374 -159418776 - MLT1F1 LTR MaLR -6 561 1 252 0 0 0 chr5 40211459 40211487 -159418663 + (TTGG)n Simple_repeat Simple_repeat 2 29 0 2473 65 3 7 chr5 40212113 40212419 -159417731 - AluY SINE Alu -6 305 1 368 239 15 4 chr5 40213504 40213590 -159416560 - MER5A DNA MER1_type -81 106 12 25 0 0 0 chr5 40213814 40213839 -159416311 + AT_rich Low_complexity Low_complexity 1 25 0 364 246 82 41 chr5 40215803 40215974 -159414176 + L1ME LINE L1 5551 5728 -393 2186 115 0 0 chr5 40216170 40216465 -159413685 + AluSc SINE Alu 1 295 -14 263 302 44 137 chr5 40217755 40218070 -159412080 + L2 LINE L2 2977 3262 -10 510 361 108 24 chr5 40218247 40218832 -159411318 - L2 LINE L2 -466 2848 2215 2185 88 14 3 chr5 40218880 40219176 -159410974 - AluSx SINE Alu -11 301 3 933 193 181 40 chr5 40219291 40219695 -159410455 + L1MC4 LINE L1 7480 7940 -102 1476 173 61 17 chr5 40219756 40220051 -159410099 - AluJo SINE Alu -4 308 1 289 280 29 115 chr5 40220300 40220579 -159409571 - MLT1I LTR MaLR -50 359 105 2016 127 87 0 chr5 40220755 40221087 -159409063 + MER46B DNA MER2_type 1 236 0 27 43 5 0 chr5 40221323 40221408 -159408742 + AT_rich Low_complexity Low_complexity 1 48 0 23 33 0 0 chr5 40221645 40221675 -159408475 + AT_rich Low_complexity Low_complexity 1 30 0 10637 42 9 35 chr5 40222882 40225560 -159404590 - L1PA5 LINE L1 -3 6151 3528 653 218 0 0 chr5 40225786 40225910 -159404240 - FLAM_A SINE Alu -5 128 5 318 216 21 21 chr5 40226700 40226797 -159403353 - MER113 DNA MER1_type? -393 128 32 2259 99 0 3 chr5 40228300 40228604 -159401546 - AluSx SINE Alu -9 303 1 1944 106 0 62 chr5 40229423 40229743 -159400407 + AluSc SINE Alu 1 300 -9 30 59 0 0 chr5 40230637 40230688 -159399462 + AT_rich Low_complexity Low_complexity 1 51 0 444 267 37 14 chr5 40230809 40230930 -159399220 + MIR SINE MIR 8 128 -80 274 242 132 22 chr5 40230953 40231044 -159399106 + L2 LINE L2 3211 3311 -2 194 352 22 22 chr5 40231039 40231130 -159399020 + MIR SINE MIR 151 241 -21 * 200 219 0 24 chr5 40231529 40231570 -159398580 + L2 LINE L2 3215 3254 -18 471 259 57 63 chr5 40231667 40231689 -159398461 - MIR SINE MIR -56 206 185 2094 105 10 0 chr5 40231689 40231983 -159398167 - AluSq SINE Alu -16 297 1 471 259 57 63 chr5 40231983 40232118 -159398032 - MIR SINE MIR -77 185 50 1909 251 69 28 chr5 40232625 40233136 -159397014 - MLT1H1 LTR MaLR 0 555 20 522 125 0 0 chr5 40233136 40233224 -159396926 - L1MA3 LINE L1 0 6305 6218 1909 251 69 28 chr5 40233224 40233245 -159396905 - MLT1H1 LTR MaLR -535 20 1 1648 220 222 10 chr5 40233757 40234275 -159395875 - L2 LINE L2 -513 2801 2174 675 126 45 0 chr5 40234290 40234401 -159395749 - AluSq/x SINE Alu -196 116 1 539 239 172 18 chr5 40234459 40234622 -159395528 + MIR3 SINE MIR 14 201 -7 2818 228 93 13 chr5 40234974 40235733 -159394417 - L1ME1 LINE L1 -6 6160 5341 * 8767 232 92 29 chr5 40235731 40237733 -159392417 - L1MDa LINE L1 -743 5472 3203 1791 181 3 0 chr5 40237733 40238036 -159392114 - AluJb SINE Alu -8 304 1 8767 232 92 29 chr5 40238036 40239155 -159390995 - L1MDa LINE L1 -3012 3203 2156 880 184 12 6 chr5 40239196 40239359 -159390791 - FAM SINE Alu -2 47 1 294 211 13 13 chr5 40239423 40239499 -159390651 - L1MDa LINE L1 -4301 2095 2020 25 0 0 0 chr5 40240030 40240055 -159390095 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 40240670 40240694 -159389456 + AT_rich Low_complexity Low_complexity 1 24 0 1052 228 216 15 chr5 40241390 40241714 -159388436 + L2 LINE L2 974 1362 -1952 495 282 121 29 chr5 40241761 40241967 -159388183 + L2 LINE L2 1818 2042 -1272 1185 222 80 44 chr5 40242055 40242443 -159387707 - MLT1C LTR MaLR 0 467 66 447 244 113 48 chr5 40242514 40242681 -159387469 - L1MC4a LINE L1 -1485 6323 6136 1813 141 60 15 chr5 40242681 40243014 -159387136 + MER7A DNA MER2_type 1 346 0 447 244 113 48 chr5 40243014 40243076 -159387074 - L1MC4a LINE L1 -1672 6136 6079 351 241 35 17 chr5 40243191 40243307 -159386843 + MIR SINE MIR 118 235 -27 227 329 110 14 chr5 40244326 40244399 -159385751 - MER5A DNA MER1_type -19 170 91 321 224 56 9 chr5 40244826 40244933 -159385217 + L1MC4 LINE L1 7929 8040 -2 2230 228 71 34 chr5 40245092 40245428 -159384722 - L1MD2 LINE L1 -1 6358 6036 1657 194 17 0 chr5 40245428 40245717 -159384433 - AluJb SINE Alu -18 294 1 2230 228 71 34 chr5 40245717 40246000 -159384150 - L1MD2 LINE L1 -323 6036 5707 2066 154 62 31 chr5 40246000 40246384 -159383766 - MSTD LTR MaLR 0 396 1 2230 228 71 34 chr5 40246384 40246470 -159383680 - L1MD2 LINE L1 -652 5707 5626 619 211 83 19 chr5 40247130 40247286 -159382864 + MIR SINE MIR 90 255 -7 296 273 121 10 chr5 40247360 40247459 -159382691 + L2 LINE L2 3141 3250 -22 23 0 0 0 chr5 40248183 40248206 -159381944 + AT_rich Low_complexity Low_complexity 1 23 0 2158 119 3 0 chr5 40248570 40248880 -159381270 + AluSx SINE Alu 1 311 -1 1944 130 20 3 chr5 40248880 40249173 -159380977 + AluSx SINE Alu 1 298 -14 284 358 58 0 chr5 40249275 40249395 -159380755 + L3 LINE CR1 845 971 -606 448 211 13 0 chr5 40249502 40249578 -159380572 + MER2 DNA MER2_type 269 345 0 1157 257 64 18 chr5 40249579 40250019 -159380131 + L1M4 LINE L1 4252 4711 -1435 1513 241 151 50 chr5 40250024 40250718 -159379432 - L2 LINE L2 -1001 2313 1550 23 0 0 0 chr5 40250977 40251000 -159379150 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 40251589 40251610 -159378540 + AT_rich Low_complexity Low_complexity 1 21 0 397 237 9 130 chr5 40252758 40252973 -159377177 + LTR41 LTR ERVL 552 740 -33 253 235 0 15 chr5 40252982 40253050 -159377100 + L1MC4 LINE L1 6648 6714 -1328 235 311 94 9 chr5 40253165 40253271 -159376879 + MIR SINE MIR 1 115 -147 300 364 38 3 chr5 40253373 40253498 -159376652 + MIR SINE MIR 40 177 -31 310 318 58 29 chr5 40253584 40253757 -159376393 + L2 LINE L2 2175 2352 -962 279 247 62 62 chr5 40254586 40254683 -159375467 + L2 LINE L2 3169 3265 -7 701 234 102 15 chr5 40255473 40255670 -159374480 - MIR SINE MIR -12 250 37 463 200 158 61 chr5 40255803 40255968 -159374182 + MIR SINE MIR 38 218 -44 466 269 102 23 chr5 40255978 40256194 -159373956 - L1ME LINE L1 -385 5736 5504 278 302 16 32 chr5 40256754 40256880 -159373270 - MIR SINE MIR -14 248 125 372 164 0 0 chr5 40258443 40258510 -159371640 + (TG)n Simple_repeat Simple_repeat 2 68 0 664 291 145 0 chr5 40259703 40259930 -159370220 + MIR SINE MIR 2 261 -1 2208 63 7 40 chr5 40262366 40262666 -159367484 + AluSc SINE Alu 3 292 -17 23 0 0 0 chr5 40262791 40262814 -159367336 + AT_rich Low_complexity Low_complexity 1 23 0 2363 106 0 0 chr5 40263044 40263355 -159366795 - AluSx SINE Alu -1 311 1 2347 94 0 0 chr5 40264131 40264430 -159365720 + AluSq SINE Alu 1 299 -14 24 0 0 0 chr5 40265134 40265158 -159364992 + AT_rich Low_complexity Low_complexity 1 24 0 1924 149 3 3 chr5 40265353 40265661 -159364489 + AluJb SINE Alu 1 308 -4 887 127 7 14 chr5 40266379 40266521 -159363629 + FLAM_C SINE Alu 1 141 -2 246 323 115 31 chr5 40266953 40267049 -159363101 - L3 LINE CR1 -34 1543 1440 23 0 0 0 chr5 40267299 40267322 -159362828 + AT_rich Low_complexity Low_complexity 1 23 0 374 332 71 58 chr5 40267345 40267640 -159362510 + L3 LINE CR1 1263 1561 -16 24 0 0 0 chr5 40267669 40267693 -159362457 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr5 40268765 40268788 -159361362 + AT_rich Low_complexity Low_complexity 1 23 0 1766 163 42 9 chr5 40269061 40269393 -159360757 - MER2 DNA MER2_type 0 344 2 1588 189 50 0 chr5 40269948 40270228 -159359922 + AluJb SINE Alu 1 294 -18 5217 181 53 9 chr5 40270602 40272241 -159357909 + L1MA4 LINE L1 4554 6296 -4 353 292 102 31 chr5 40272545 40273137 -159357013 - L1MC5 LINE L1 -350 7611 7146 24 91 0 0 chr5 40273387 40273453 -159356697 + AT_rich Low_complexity Low_complexity 1 66 0 319 250 69 94 chr5 40273543 40273703 -159356447 + L1MC/D LINE L1 5317 5472 -2336 350 260 39 55 chr5 40273868 40274049 -159356101 + L1ME LINE L1 3545 3722 -2424 435 221 0 0 chr5 40274122 40274208 -159355942 - FLAM_A SINE Alu -10 132 47 1815 156 29 16 chr5 40274246 40274554 -159355596 + AluJb SINE Alu 1 312 0 1685 95 68 4 chr5 40274748 40275000 -159355150 + AluY SINE Alu 33 300 -11 700 227 0 0 chr5 40275008 40275136 -159355014 + FLAM_A SINE Alu 1 128 -5 1167 286 101 20 chr5 40275158 40276079 -159354071 + L1ME LINE L1 4034 5045 -1101 694 276 161 10 chr5 40276110 40276501 -159353649 + L1ME LINE L1 5352 5801 -361 1635 177 33 13 chr5 40276532 40276831 -159353319 + AluJo SINE Alu 3 307 -5 198 0 0 0 chr5 40276839 40276861 -159353289 + (TA)n Simple_repeat Simple_repeat 1 22 0 635 161 131 8 chr5 40277663 40277793 -159352357 + MER58C DNA MER1_type 70 215 0 21 36 0 0 chr5 40279756 40279784 -159350366 + AT_rich Low_complexity Low_complexity 1 28 0 2020 69 0 42 chr5 40279784 40279897 -159350253 - L1PA8 LINE L1 -4 6168 6052 2387 76 0 10 chr5 40279897 40280201 -159349949 - AluSg SINE Alu -9 301 1 2020 69 0 42 chr5 40280201 40280376 -159349774 - L1PA8 LINE L1 -120 6052 5892 405 285 145 35 chr5 40280859 40281059 -159349091 + MIR SINE MIR 9 230 -32 206 294 156 28 chr5 40281993 40282102 -159348048 + MIR3 SINE MIR 45 167 -41 5624 173 23 6 chr5 40284033 40286045 -159344105 - L1PA16 LINE L1 -1 6165 4126 2059 171 3 3 chr5 40286861 40287205 -159342945 + MER7A DNA MER2_type 2 343 -3 833 115 0 23 chr5 40293478 40293608 -159336542 - FLAM_C SINE Alu -2 131 5 464 173 333 0 chr5 40293742 40293898 -159336252 - MER3 DNA MER1_type -1 208 1 186 240 0 0 chr5 40294758 40294808 -159335342 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 214 358 15 0 chr5 40295419 40295486 -159334664 + L2 LINE L2 3200 3267 -5 2005 121 0 4 chr5 40296016 40296296 -159333854 + AluSx SINE Alu 29 307 -5 22 35 0 0 chr5 40297416 40297445 -159332705 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 40298179 40298214 -159331936 + AT_rich Low_complexity Low_complexity 1 35 0 696 215 8 0 chr5 40298953 40299083 -159331067 - FRAM SINE Alu -17 159 29 2253 71 4 0 chr5 40299144 40299466 -159330684 - AluY SINE Alu 0 323 1 205 205 0 0 chr5 40301843 40301882 -159328268 + (TA)n Simple_repeat Simple_repeat 2 40 0 742 256 82 85 chr5 40302473 40302766 -159327384 - L2 LINE L2 -4 3268 2977 869 107 0 0 chr5 40304963 40305075 -159325075 + FLAM_C SINE Alu 6 117 -26 394 309 94 39 chr5 40305861 40306042 -159324108 - MER117 DNA MER1_type 0 197 7 402 328 30 30 chr5 40308010 40308144 -159322006 - L2 LINE L2 -1 3312 3179 827 283 58 37 chr5 40308424 40308889 -159321261 - LTR33 LTR ERVL 0 521 6 396 244 0 12 chr5 40309833 40309915 -159320235 + Tigger7 DNA MER2_type 2 82 -257 * 908 161 124 5 chr5 40309912 40310105 -159320045 + Tigger7 DNA MER2_type 2272 2487 0 460 165 66 0 chr5 40310501 40310592 -159319558 + MIR SINE MIR 156 252 -10 1355 221 0 34 chr5 40310815 40311137 -159319013 - AluJo SINE Alu -1 311 1 301 145 32 0 chr5 40311160 40311222 -159318928 - L1ME4a LINE L1 -8 6113 6050 1421 106 60 0 chr5 40311402 40311619 -159318531 - MER30 DNA MER1_type 0 230 1 26 0 0 0 chr5 40311663 40311689 -159318461 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr5 40315237 40315260 -159314890 + AT_rich Low_complexity Low_complexity 1 23 0 835 241 68 14 chr5 40315366 40315573 -159314577 - MER20 DNA MER1_type 0 219 2 2267 77 27 0 chr5 40316736 40317033 -159313117 - AluSg SINE Alu -5 305 1 253 347 63 50 chr5 40317084 40317290 -159312860 + MIR SINE MIR 23 232 -30 850 199 13 0 chr5 40317292 40317443 -159312707 + MER46A DNA MER2_type 1 153 -83 25 31 0 0 chr5 40317667 40317699 -159312451 + AT_rich Low_complexity Low_complexity 1 32 0 1559 195 7 3 chr5 40317704 40317986 -159312164 + AluJb SINE Alu 4 286 -26 233 265 0 20 chr5 40318451 40318553 -159311597 - L1M LINE L1 -2380 5428 5329 1246 136 5 0 chr5 40318567 40318758 -159311392 - AluJb SINE Alu -1 311 120 6284 53 10 82 chr5 40318889 40320684 -159309466 - SVA Other Other -683 1386 1 215 294 0 0 chr5 40321301 40321352 -159308798 + MIR3 SINE MIR 107 157 -51 2273 93 0 7 chr5 40321550 40321851 -159308299 - AluSp SINE Alu -14 299 1 2071 120 10 3 chr5 40321880 40322172 -159307978 + AluSg SINE Alu 1 294 -16 22 35 0 0 chr5 40323329 40323358 -159306792 + AT_rich Low_complexity Low_complexity 1 29 0 24 67 0 0 chr5 40323844 40323889 -159306261 + AT_rich Low_complexity Low_complexity 1 45 0 1016 189 6 108 chr5 40324201 40324452 -159305698 - L1MD3 LINE L1 0 8038 7849 547 168 112 148 chr5 40324452 40324648 -159305502 + MER5A DNA MER1_type 1 189 0 1016 189 6 108 chr5 40324648 40324750 -159305400 - L1MD3 LINE L1 -189 7849 7738 1203 224 47 4 chr5 40324772 40325027 -159305123 - L1MC4 LINE L1 -1014 7028 6763 1936 126 60 0 chr5 40325266 40325551 -159304599 + AluSx SINE Alu 1 302 -10 26 30 0 0 chr5 40326180 40326213 -159303937 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 40326313 40326334 -159303816 + AT_rich Low_complexity Low_complexity 1 21 0 2352 94 0 0 chr5 40327445 40327743 -159302407 + AluSq SINE Alu 1 298 -15 2010 95 4 0 chr5 40327855 40328119 -159302031 + AluY SINE Alu 27 291 -20 21 57 0 0 chr5 40328418 40328453 -159301697 + AT_rich Low_complexity Low_complexity 1 35 0 203 133 0 0 chr5 40329139 40329169 -159300981 + (TATG)n Simple_repeat Simple_repeat 3 32 0 444 289 132 56 chr5 40329890 40330312 -159299838 - L1MC5 LINE L1 -151 7810 7345 2124 121 3 3 chr5 40330312 40330610 -159299540 + AluSq SINE Alu 1 298 -15 444 289 132 56 chr5 40330610 40330672 -159299478 - L1MC5 LINE L1 -616 7345 7289 212 266 31 0 chr5 40330691 40330755 -159299395 - MIR SINE MIR -22 240 175 1474 190 7 69 chr5 40331380 40331685 -159298465 + AluJo SINE Alu 3 288 -24 22 80 0 0 chr5 40331760 40331810 -159298340 + AT_rich Low_complexity Low_complexity 1 50 0 2223 164 26 7 chr5 40331817 40332245 -159297905 + L1MA4 LINE L1 5864 6299 -1 21 57 0 0 chr5 40332272 40332307 -159297843 + AT_rich Low_complexity Low_complexity 1 35 0 766 200 28 56 chr5 40333178 40333358 -159296792 + FAM SINE Alu 1 175 0 2311 96 0 25 chr5 40334033 40334347 -159295803 - AluSx SINE Alu -6 306 1 797 201 137 97 chr5 40334648 40334762 -159295388 - L1MC5 LINE L1 -99 7862 7754 2251 104 3 13 chr5 40334762 40335070 -159295080 - AluSx SINE Alu -7 305 1 797 201 137 97 chr5 40335070 40335585 -159294565 - L1MC5 LINE L1 -207 7754 7238 * 2225 207 108 16 chr5 40335579 40336192 -159293958 - L1ME1 LINE L1 -58 6108 5440 1101 197 0 24 chr5 40337191 40337404 -159292746 - AluJb SINE Alu -18 294 87 2337 86 0 7 chr5 40337415 40337716 -159292434 - AluSq SINE Alu -14 299 1 1247 239 20 7 chr5 40338129 40338434 -159291716 + L1ME2 LINE L1 5745 6053 -111 377 260 75 34 chr5 40338434 40338580 -159291570 - MER5A DNA MER1_type -1 188 37 * 753 233 0 13 chr5 40338450 40338600 -159291550 + MER5A DNA MER1_type 37 184 -5 419 216 9 17 chr5 40338600 40338716 -159291434 + L1ME2 LINE L1 6040 6154 -10 500 135 0 11 chr5 40338785 40338874 -159291276 + (TG)n Simple_repeat Simple_repeat 2 89 0 1389 233 0 17 chr5 40338912 40339200 -159290950 + AluJo SINE Alu 1 283 -29 21 0 0 0 chr5 40339655 40339676 -159290474 + AT_rich Low_complexity Low_complexity 1 21 0 518 231 148 73 chr5 40339676 40340075 -159290075 + L1ME3A LINE L1 4632 5060 -1086 263 176 0 29 chr5 40340089 40340157 -159289993 - L1MC4 LINE L1 -1339 6703 6638 849 149 8 15 chr5 40340164 40340298 -159289852 - FLAM_A SINE Alu 0 133 1 666 272 106 56 chr5 40340361 40341102 -159289048 + L1ME3A LINE L1 5171 5950 -220 1553 161 79 0 chr5 40341439 40341706 -159288444 + AluJb SINE Alu 1 288 -24 650 223 14 47 chr5 40341922 40342133 -159288017 - MER3 DNA MER1_type -1 208 5 22 0 0 0 chr5 40342427 40342449 -159287701 + AT_rich Low_complexity Low_complexity 1 22 0 24 67 0 0 chr5 40342600 40342645 -159287505 + AT_rich Low_complexity Low_complexity 1 45 0 318 50 0 0 chr5 40342767 40342807 -159287343 + (TA)n Simple_repeat Simple_repeat 1 40 0 25 83 0 0 chr5 40343306 40343366 -159286784 + AT_rich Low_complexity Low_complexity 1 60 0 23 86 0 0 chr5 40343397 40343455 -159286695 + AT_rich Low_complexity Low_complexity 1 58 0 2287 79 0 7 chr5 40343535 40343825 -159286325 + AluY SINE Alu 1 288 -23 375 98 0 0 chr5 40343825 40343886 -159286264 + (TA)n Simple_repeat Simple_repeat 1 61 0 238 286 0 0 chr5 40344056 40344126 -159286024 + T-rich Low_complexity Low_complexity 1 70 0 1825 180 3 3 chr5 40344413 40344718 -159285432 - AluJo SINE Alu -7 305 1 27 0 0 0 chr5 40345507 40345534 -159284616 + AT_rich Low_complexity Low_complexity 1 27 0 50 31 0 0 chr5 40345711 40345775 -159284375 + AT_rich Low_complexity Low_complexity 1 64 0 407 233 133 8 chr5 40345907 40346027 -159284123 - MIR SINE MIR -30 232 98 703 279 116 0 chr5 40346351 40346566 -159283584 - MIR SINE MIR 0 262 23 350 220 85 75 chr5 40346971 40347171 -159282979 - L1ME LINE L1 -303 5818 5617 287 241 63 49 chr5 40347266 40347497 -159282653 - L1ME LINE L1 -753 5489 5255 2282 103 0 10 chr5 40347685 40347997 -159282153 - AluSg SINE Alu -1 309 1 1856 158 3 7 chr5 40347999 40348296 -159281854 - AluSx SINE Alu -16 296 1 618 35 35 0 chr5 40348586 40348673 -159281477 + AluSg SINE Alu 1 90 -220 1008 108 13 6 chr5 40348777 40348934 -159281216 + THE1C-int LTR MaLR 1423 1580 0 2134 116 42 53 chr5 40348934 40349087 -159281063 + THE1C LTR MaLR 1 154 -221 2151 120 7 0 chr5 40349087 40349386 -159280764 - AluSc SINE Alu -8 301 1 2134 116 42 53 chr5 40349386 40349611 -159280539 + THE1C LTR MaLR 154 375 0 8739 204 88 25 chr5 40349611 40349846 -159280304 + L1 LINE L1 2775 2994 -3161 2313 94 10 0 chr5 40349846 40350144 -159280006 + AluSp SINE Alu 1 301 -12 8739 204 88 25 chr5 40350144 40351401 -159278749 + L1 LINE L1 2994 4170 -1985 306 50 0 0 chr5 40351401 40351441 -159278709 + (CA)n Simple_repeat Simple_repeat 2 41 0 8739 204 88 25 chr5 40351441 40352292 -159277858 + L1 LINE L1 4170 5295 -860 2553 45 0 10 chr5 40352292 40352603 -159277547 + AluY SINE Alu 1 308 -3 8739 204 88 25 chr5 40352603 40352694 -159277456 + L1 LINE L1 5295 5379 -776 804 174 8 0 chr5 40352985 40353106 -159277044 + FLAM_C SINE Alu 3 124 -19 2200 96 0 7 chr5 40353111 40353404 -159276746 + AluSg SINE Alu 1 291 -19 21 36 0 0 chr5 40353404 40353432 -159276718 + AT_rich Low_complexity Low_complexity 1 28 0 6126 86 26 8 chr5 40354553 40355531 -159274619 - L1PB1 LINE L1 -7 6144 5150 1685 151 13 7 chr5 40355634 40355932 -159274218 + AluSx SINE Alu 1 300 -12 186 279 82 33 chr5 40356519 40356580 -159273570 - MIR SINE MIR -152 110 47 2166 115 10 3 chr5 40356603 40356908 -159273242 - AluSc SINE Alu -2 307 1 1576 165 0 84 chr5 40357020 40357221 -159272929 + AluJb SINE Alu 1 167 -145 2107 145 0 3 chr5 40357221 40357531 -159272619 + AluSx SINE Alu 3 311 -1 1576 165 0 84 chr5 40357531 40357651 -159272499 + AluJb SINE Alu 167 295 -17 1642 144 26 46 chr5 40359132 40359438 -159270712 + AluJo SINE Alu 1 300 -12 666 220 43 0 chr5 40359549 40359690 -159270460 + MIR SINE MIR 29 175 -87 2327 86 0 13 chr5 40359733 40360037 -159270113 - AluSc SINE Alu -9 300 1 2261 95 3 16 chr5 40360414 40360720 -159269430 + AluSp SINE Alu 1 302 -11 2445 69 0 7 chr5 40360729 40361033 -159269117 + AluY SINE Alu 1 302 -9 814 207 12 6 chr5 40361449 40361618 -159268532 + FAM SINE Alu 1 170 -5 1368 65 0 6 chr5 40362907 40363076 -159267074 - AluSq SINE Alu -15 298 131 573 103 4 1 chr5 40363697 40363931 -159266219 + AluSx SINE Alu 41 305 -5 1263 192 92 37 chr5 40364580 40364851 -159265299 - AluJo SINE Alu -16 286 1 315 141 0 0 chr5 40364952 40365016 -159265134 + (CA)n Simple_repeat Simple_repeat 2 65 0 1506 175 4 18 chr5 40365550 40365830 -159264320 - AluJo SINE Alu -1 311 36 698 87 10 0 chr5 40366792 40366895 -159263255 - L1MA2 LINE L1 0 6304 6201 1054 290 53 35 chr5 40366946 40366967 -159263183 + LTR16B LTR ERVL 23 42 -422 1695 169 17 14 chr5 40366967 40367263 -159262887 + AluJb SINE Alu 1 297 -15 1054 290 53 35 chr5 40367263 40367675 -159262475 + LTR16B LTR ERVL 42 464 0 570 222 86 0 chr5 40367727 40367844 -159262306 + FLAM_A SINE Alu 1 127 -6 1806 205 116 0 chr5 40367941 40368302 -159261848 + MER68 LTR ERV1 160 562 0 321 248 81 60 chr5 40368302 40368447 -159261703 + LTR16B LTR ERVL 317 464 0 2378 90 10 6 chr5 40368515 40368827 -159261323 - AluSq SINE Alu 0 313 1 216 0 0 0 chr5 40368840 40368864 -159261286 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1188 182 5 5 chr5 40368871 40369074 -159261076 + AluJb SINE Alu 103 305 -7 22 56 0 0 chr5 40369124 40369160 -159260990 + AT_rich Low_complexity Low_complexity 1 36 0 317 120 0 0 chr5 40369177 40369227 -159260923 - AluJo SINE Alu -161 141 92 739 199 150 34 chr5 40369470 40369590 -159260560 + L1P LINE L1 4467 4572 -1574 1899 132 41 7 chr5 40369590 40369885 -159260265 + AluSx SINE Alu 5 309 -3 739 199 150 34 chr5 40369885 40370031 -159260119 + L1P LINE L1 4572 4764 -1382 9729 105 47 4 chr5 40370133 40371531 -159258619 - THE1C-int LTR MaLR -123 1457 1 2501 114 8 16 chr5 40371531 40371909 -159258241 - THE1C LTR MaLR 0 375 1 1795 243 19 4 chr5 40371932 40372393 -159257757 - L1 LINE L1 -3380 2766 2299 23 33 0 0 chr5 40373378 40373408 -159256742 + AT_rich Low_complexity Low_complexity 1 30 0 1682 179 11 0 chr5 40373570 40373855 -159256295 - AluJo SINE Alu -24 288 1 1005 97 21 0 chr5 40374822 40374967 -159255183 - MER30 DNA MER1_type -74 156 9 845 186 0 7 chr5 40375344 40375489 -159254661 + AluSg/x SINE Alu 146 289 -21 890 194 63 40 chr5 40375496 40375655 -159254495 + MER2 DNA MER2_type 81 250 -95 2304 69 21 3 chr5 40375655 40375946 -159254204 - AluSq SINE Alu -17 296 1 890 194 63 40 chr5 40375946 40376039 -159254111 + MER2 DNA MER2_type 250 339 -6 771 160 76 105 chr5 40376261 40376448 -159253702 + L1MB4 LINE L1 5950 6130 -50 1831 178 0 10 chr5 40376448 40376752 -159253398 + AluJb SINE Alu 1 301 -11 771 160 76 105 chr5 40376752 40376802 -159253348 + L1MB4 LINE L1 6130 6180 0 25 31 0 0 chr5 40376838 40376870 -159253280 + AT_rich Low_complexity Low_complexity 1 32 0 549 217 104 0 chr5 40376881 40376987 -159253163 + AluSq/x SINE Alu 4 120 -193 25 51 0 0 chr5 40377114 40377153 -159252997 + AT_rich Low_complexity Low_complexity 1 39 0 913 232 32 0 chr5 40377289 40377474 -159252676 + MER58A DNA MER1_type 33 223 -1 216 0 0 0 chr5 40380364 40380388 -159249762 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 279 240 115 10 chr5 40380569 40380665 -159249485 - MIR SINE MIR -71 191 86 2458 64 3 0 chr5 40380917 40381215 -159248935 + AluSp SINE Alu 1 299 -14 24 53 0 0 chr5 40382508 40382546 -159247604 + AT_rich Low_complexity Low_complexity 1 38 0 325 274 52 7 chr5 40382554 40382689 -159247461 - L1MC5 LINE L1 -89 7872 7732 2481 66 10 0 chr5 40382697 40382999 -159247151 - AluY SINE Alu -6 305 1 2391 75 0 3 chr5 40383192 40383487 -159246663 + AluSg SINE Alu 1 294 -16 275 340 39 0 chr5 40384430 40384533 -159245617 - MIR SINE MIR -68 140 34 182 315 108 23 chr5 40385365 40385495 -159244655 - L2 LINE L2 -956 2358 2218 194 280 0 20 chr5 40385731 40385781 -159244369 - L2 LINE L2 -2100 1214 1166 195 311 184 10 chr5 40385850 40386056 -159244094 - L2 LINE L2 -2341 973 732 223 209 0 0 chr5 40386151 40386194 -159243956 - L2 LINE L2 0 3313 3271 1693 161 75 11 chr5 40386481 40386761 -159243389 + AluJb SINE Alu 1 298 -14 230 301 217 63 chr5 40386845 40387241 -159242909 - L2 LINE L2 -341 2973 2517 377 214 201 56 chr5 40387603 40387926 -159242224 - HAL1 LINE L1 -59 2448 2079 1040 250 140 14 chr5 40388048 40388492 -159241658 - HAL1 LINE L1 -634 1873 1374 725 186 0 0 chr5 40388508 40388626 -159241524 + FLAM_C SINE Alu 1 118 -25 236 261 121 45 chr5 40388648 40389004 -159241146 - HAL1 LINE L1 -1138 1369 987 2111 104 4 4 chr5 40389036 40389342 -159240808 + AluSc SINE Alu 1 306 0 1922 143 6 37 chr5 40389774 40390096 -159240054 + AluJo SINE Alu 1 312 0 2081 136 48 0 chr5 40390128 40390423 -159239727 - AluSx SINE Alu -2 310 2 322 357 80 28 chr5 40390512 40390725 -159239425 - HAL1 LINE L1 -1511 996 773 643 187 161 7 chr5 40390748 40390903 -159239247 - MER58A DNA MER1_type 0 224 46 348 307 57 80 chr5 40391193 40391369 -159238781 - HAL1 LINE L1 -2299 208 37 2204 140 0 7 chr5 40391419 40391727 -159238423 - AluJb SINE Alu -5 307 2 734 129 32 32 chr5 40391727 40391851 -159238299 - AluJo SINE Alu -177 135 12 5988 89 14 2 chr5 40391861 40393183 -159236967 - L1PA11 LINE L1 -1 6173 4836 22 56 0 0 chr5 40393739 40393775 -159236375 + AT_rich Low_complexity Low_complexity 1 36 0 427 343 42 15 chr5 40393903 40394235 -159235915 + L1MEc LINE L1 207 547 -6016 395 177 204 26 chr5 40394836 40394853 -159235297 + L1MEc LINE L1 799 812 -5472 479 196 137 10 chr5 40394853 40394979 -159235171 + FLAM_C SINE Alu 2 140 0 395 177 204 26 chr5 40394979 40395133 -159235017 + L1MEc LINE L1 812 989 -5295 2184 104 0 27 chr5 40395139 40395437 -159234713 - AluSx SINE Alu -22 290 1 513 250 3 35 chr5 40395452 40395670 -159234480 + L1MEc LINE L1 1275 1448 -4832 804 104 16 6 chr5 40395673 40395923 -159234227 + AluSx SINE Alu 1 294 -15 316 266 53 4 chr5 40395931 40396085 -159234065 + L1MEc LINE L1 1641 1759 -4623 1236 186 55 6 chr5 40396090 40396402 -159233748 + L1 LINE L1 4575 4901 -1245 535 98 0 0 chr5 40396402 40396484 -159233666 - LTR9B LTR ERV1 -562 82 1 698 143 39 77 chr5 40396485 40396667 -159233483 + L1MEc LINE L1 2453 2627 -3755 671 254 11 0 chr5 40396683 40396872 -159233278 + L1PBa LINE L1 7 197 -6666 * 7581 143 35 14 chr5 40396869 40398312 -159231838 + L1PBa LINE L1 1392 2875 -3987 2121 96 32 7 chr5 40398312 40398593 -159231557 + AluSg SINE Alu 1 288 -22 7581 143 35 14 chr5 40398593 40398812 -159231338 + L1PBa LINE L1 2875 3088 -3774 2342 166 11 9 chr5 40399742 40400200 -159229950 + L1MEc LINE L1 2598 3056 -3326 2011 183 81 33 chr5 40400200 40400682 -159229468 + LTR22 LTR ERVK 1 505 -4 3467 132 34 7 chr5 40400687 40401276 -159228874 + HERVK22 LTR ERVK 1 605 -6232 2445 65 0 0 chr5 40401277 40401568 -159228582 - AluY SINE Alu -20 291 1 16773 91 10 0 chr5 40401570 40403936 -159226214 + HERVK22 LTR ERVK 694 3081 -3756 10198 113 16 14 chr5 40403946 40405586 -159224564 + HERVK22 LTR ERVK 3205 4847 -1990 18011 86 8 12 chr5 40405688 40408241 -159221909 + HERVK22 LTR ERVK 4294 6837 0 1882 179 80 66 chr5 40408241 40408739 -159221411 + LTR22 LTR ERVK 1 505 -4 10257 196 17 2 chr5 40408744 40411477 -159218673 + L1P5 LINE L1 3051 5822 -565 251 108 0 0 chr5 40411484 40411533 -159218617 + L1PBa LINE L1 3094 3142 -3720 781 141 0 63 chr5 40411542 40411684 -159218466 + FLAM_C SINE Alu 1 133 0 298 207 0 0 chr5 40411709 40411767 -159218383 + L1 LINE L1 3373 3430 -3432 1629 126 105 26 chr5 40411898 40412240 -159217910 + L1M1 LINE L1 2198 2566 -4283 2922 194 16 70 chr5 40412242 40412532 -159217618 + L1M1 LINE L1 2816 3120 -3728 2345 98 0 0 chr5 40412532 40412838 -159217312 + AluSg1 SINE Alu 1 306 -3 2922 194 16 70 chr5 40412838 40413539 -159216611 + L1M1 LINE L1 3120 3912 -2936 21083 143 32 14 chr5 40413549 40416611 -159213539 - L1PA11 LINE L1 -2 6172 2989 2144 145 0 0 chr5 40416611 40416921 -159213229 - AluSx SINE Alu -2 310 1 21083 143 32 14 chr5 40416921 40418748 -159211402 - L1PA11 LINE L1 -3185 2989 1197 2042 120 0 7 chr5 40418754 40419038 -159211112 + AluSx SINE Alu 6 287 -25 2023 110 0 57 chr5 40419057 40419357 -159210793 + AluSq SINE Alu 1 283 -30 2629 159 23 63 chr5 40419369 40419453 -159210697 + L1M1 LINE L1 5443 5529 -1473 1845 169 10 3 chr5 40419453 40419761 -159210389 + AluJb SINE Alu 1 310 -2 2629 159 23 63 chr5 40419761 40420767 -159209383 + L1M1 LINE L1 5529 6481 -521 1104 96 6 0 chr5 40420767 40420913 -159209237 + L1MA4 LINE L1 6127 6293 -7 977 175 142 12 chr5 40421017 40421257 -159208893 - Charlie1 DNA MER1_type -219 2542 2272 195 69 0 0 chr5 40422249 40422278 -159207872 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 216 86 0 0 chr5 40422635 40422670 -159207480 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 210 37 0 0 chr5 40422938 40422965 -159207185 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 877 258 322 13 chr5 40423869 40424096 -159206054 + L2 LINE L2 2174 2330 -984 2200 112 3 0 chr5 40424096 40424390 -159205760 - AluSx SINE Alu -17 295 1 877 258 322 13 chr5 40424390 40424764 -159205386 + L2 LINE L2 2330 2961 -353 22 35 0 0 chr5 40424889 40424918 -159205232 + AT_rich Low_complexity Low_complexity 1 29 0 233 245 0 0 chr5 40425051 40425100 -159205050 + L2 LINE L2 3261 3309 -4 * 488 208 31 0 chr5 40425099 40425195 -159204955 - MIR SINE MIR -76 186 88 2594 56 0 0 chr5 40425237 40425540 -159204610 - AluY SINE Alu -8 303 1 2457 58 0 19 chr5 40425551 40425859 -159204291 - AluY SINE Alu -9 302 1 2482 103 22 6 chr5 40427576 40427934 -159202216 + THE1B LTR MaLR 1 364 0 230 336 67 0 chr5 40428023 40428142 -159202008 + L1MEd LINE L1 895 1021 -5098 181 0 0 0 chr5 40428248 40428268 -159201882 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 2224 97 0 0 chr5 40428268 40428546 -159201604 - AluSc SINE Alu -1 297 1 380 281 33 8 chr5 40428602 40428723 -159201427 + MIR SINE MIR 139 262 0 208 241 84 60 chr5 40428743 40428826 -159201324 + MIR SINE MIR 92 176 -86 296 301 105 23 chr5 40428838 40428971 -159201179 - MIR SINE MIR -106 156 13 23 0 0 0 chr5 40429022 40429045 -159201105 + AT_rich Low_complexity Low_complexity 1 23 0 1095 138 0 0 chr5 40429053 40429212 -159200938 + AluSq SINE Alu 1 159 -154 2229 107 0 0 chr5 40429423 40429713 -159200437 + AluSg SINE Alu 1 290 -20 1557 139 35 116 chr5 40429778 40430123 -159200027 + AluYb8 SINE Alu 1 317 -1 288 77 0 0 chr5 40430155 40430194 -159199956 + (CA)n Simple_repeat Simple_repeat 2 40 0 1593 193 14 7 chr5 40430384 40430518 -159199632 + AluJo SINE Alu 1 133 -179 2247 102 0 7 chr5 40430518 40430822 -159199328 + AluSg1 SINE Alu 1 302 -7 1593 193 14 7 chr5 40430822 40430967 -159199183 + AluJo SINE Alu 133 282 -30 1135 150 55 59 chr5 40431037 40431257 -159198893 - MER20 DNA MER1_type 0 219 1 21 0 0 0 chr5 40431807 40431828 -159198322 + AT_rich Low_complexity Low_complexity 1 21 0 2237 92 7 7 chr5 40432339 40432631 -159197519 + AluSx SINE Alu 1 292 -20 306 289 0 13 chr5 40432995 40433071 -159197079 + MER5C DNA MER1_type 1 75 -249 382 286 49 2 chr5 40433590 40433723 -159196427 + MIR SINE MIR 17 154 -63 2010 135 55 0 chr5 40434180 40434506 -159195644 - MER2 DNA MER2_type 0 344 1 209 213 0 21 chr5 40434989 40435036 -159195114 + MIR SINE MIR 81 126 -136 30 0 0 0 chr5 40435248 40435278 -159194872 + AT_rich Low_complexity Low_complexity 1 30 0 826 225 14 38 chr5 40435315 40435524 -159194626 - MIR SINE MIR -56 206 3 38 51 0 0 chr5 40435686 40435745 -159194405 + AT_rich Low_complexity Low_complexity 1 59 0 285 51 0 0 chr5 40436210 40436249 -159193901 + (CA)n Simple_repeat Simple_repeat 2 40 0 214 286 0 48 chr5 40436971 40437055 -159193095 + MIR SINE MIR 119 198 -64 2060 117 3 51 chr5 40437452 40437768 -159192382 + AluSx SINE Alu 1 301 -11 1065 252 25 6 chr5 40437773 40438094 -159192056 - L1MC4 LINE L1 -27 8015 7689 1876 162 10 3 chr5 40438095 40438392 -159191758 - AluSx SINE Alu -9 303 5 523 204 142 37 chr5 40439363 40439525 -159190625 + MIR3 SINE MIR 29 207 -1 1641 149 33 33 chr5 40440273 40440358 -159189792 - MER44D DNA MER2_type -1883 608 524 1951 134 84 0 chr5 40440358 40440679 -159189471 - MER7A DNA MER2_type 0 346 1 1641 149 33 33 chr5 40440679 40440929 -159189221 - MER44D DNA MER2_type -1966 525 3 388 283 25 50 chr5 40441026 40441146 -159189004 - L2 LINE L2 0 3272 3156 2506 84 0 0 chr5 40441185 40441495 -159188655 + AluSg SINE Alu 1 310 0 2104 128 3 10 chr5 40442336 40442648 -159187502 + AluSx SINE Alu 1 310 -2 182 280 56 65 chr5 40442681 40442788 -159187362 - L2 LINE L2 -813 2501 2396 1084 185 43 56 chr5 40443004 40443236 -159186914 + AluJo SINE Alu 1 229 -83 186 291 93 0 chr5 40443251 40443337 -159186813 - L2 LINE L2 -1477 1837 1744 310 282 9 9 chr5 40444240 40444350 -159185800 + CT-rich Low_complexity Low_complexity 2 111 0 214 318 0 0 chr5 40445148 40445192 -159184958 + L2 LINE L2 3210 3253 -19 468 271 159 0 chr5 40445355 40445506 -159184644 + MER5A DNA MER1_type 9 183 -6 22 0 0 0 chr5 40445972 40445994 -159184156 + AT_rich Low_complexity Low_complexity 1 22 0 2243 111 0 0 chr5 40446495 40446783 -159183367 + AluSx SINE Alu 1 288 -24 266 210 16 0 chr5 40446853 40446915 -159183235 - L1ME LINE L1 -338 5828 5766 291 234 25 120 chr5 40447367 40447461 -159182689 - Charlie8 DNA MER1_type -137 204 129 1475 176 62 18 chr5 40447461 40447734 -159182416 - AluJo SINE Alu -27 285 1 291 234 25 120 chr5 40447734 40447797 -159182353 - Charlie8 DNA MER1_type -212 129 62 305 279 24 67 chr5 40447798 40447963 -159182187 - L2 LINE L2 -546 2768 2611 452 198 10 10 chr5 40448569 40448665 -159181485 + MER2 DNA MER2_type 2 97 -248 1264 159 0 5 chr5 40448666 40448867 -159181283 + AluJb SINE Alu 1 200 -112 442 174 18 55 chr5 40449036 40449145 -159181005 + FLAM_A SINE Alu 11 115 -27 14681 38 19 23 chr5 40449393 40452052 -159178098 + L1PA5 LINE L1 3528 6153 -1 21 0 0 0 chr5 40452376 40452397 -159177753 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr5 40454490 40454524 -159175626 + (CA)n Simple_repeat Simple_repeat 1 34 0 202 227 0 0 chr5 40454717 40454761 -159175389 + (CA)n Simple_repeat Simple_repeat 1 44 0 682 220 16 32 chr5 40506846 40507032 -159123118 - MER3 DNA MER1_type -26 183 1 22 0 0 0 chr5 40507322 40507344 -159122806 + AT_rich Low_complexity Low_complexity 1 22 0 24 67 0 0 chr5 40507495 40507540 -159122610 + AT_rich Low_complexity Low_complexity 1 45 0 336 48 0 0 chr5 40507662 40507704 -159122446 + (TA)n Simple_repeat Simple_repeat 1 42 0 25 83 0 0 chr5 40508203 40508263 -159121887 + AT_rich Low_complexity Low_complexity 1 60 0 23 86 0 0 chr5 40508294 40508352 -159121798 + AT_rich Low_complexity Low_complexity 1 58 0 2251 84 0 3 chr5 40508432 40508719 -159121431 + AluY SINE Alu 1 286 -25 390 108 0 0 chr5 40508719 40508784 -159121366 + (TA)n Simple_repeat Simple_repeat 2 66 0 238 286 0 0 chr5 40508954 40509024 -159121126 + T-rich Low_complexity Low_complexity 1 70 0 1817 177 3 3 chr5 40509311 40509616 -159120534 - AluJo SINE Alu -7 305 1 27 0 0 0 chr5 40510401 40510428 -159119722 + AT_rich Low_complexity Low_complexity 1 27 0 50 31 0 0 chr5 40510605 40510669 -159119481 + AT_rich Low_complexity Low_complexity 1 64 0 415 233 133 8 chr5 40510801 40510921 -159119229 - MIR SINE MIR -30 232 98 711 279 116 0 chr5 40511245 40511460 -159118690 - MIR SINE MIR 0 262 23 369 220 85 75 chr5 40511865 40512065 -159118085 - L1ME LINE L1 -303 5818 5617 292 241 63 49 chr5 40512160 40512391 -159117759 - L1ME LINE L1 -753 5489 5255 2255 103 0 10 chr5 40512579 40512891 -159117259 - AluSg SINE Alu -1 309 1 1870 158 0 7 chr5 40512893 40513191 -159116959 - AluSx SINE Alu -16 296 1 2181 107 0 0 chr5 40513480 40513770 -159116380 + AluSg SINE Alu 1 290 -20 1495 139 35 116 chr5 40513835 40514180 -159115970 + AluYb8 SINE Alu 1 317 -1 270 81 0 0 chr5 40514212 40514249 -159115901 + (CA)n Simple_repeat Simple_repeat 2 38 0 1542 193 14 7 chr5 40514439 40514573 -159115577 + AluJo SINE Alu 1 133 -179 2206 102 0 7 chr5 40514573 40514878 -159115272 + AluSg1 SINE Alu 1 303 -6 1542 193 14 7 chr5 40514878 40515023 -159115127 + AluJo SINE Alu 133 282 -30 1117 150 55 59 chr5 40515093 40515313 -159114837 - MER20 DNA MER1_type 0 219 1 21 0 0 0 chr5 40515863 40515884 -159114266 + AT_rich Low_complexity Low_complexity 1 21 0 2191 92 7 7 chr5 40516395 40516687 -159113463 + AluSx SINE Alu 1 292 -20 299 289 0 13 chr5 40517050 40517126 -159113024 + MER5C DNA MER1_type 1 75 -249 381 286 49 2 chr5 40517645 40517778 -159112372 + MIR SINE MIR 17 154 -63 2041 132 55 0 chr5 40518236 40518562 -159111588 - MER2 DNA MER2_type 0 344 1 193 257 29 43 chr5 40519022 40519092 -159111058 + MIR SINE MIR 58 126 -136 30 0 0 0 chr5 40519304 40519334 -159110816 + AT_rich Low_complexity Low_complexity 1 30 0 804 225 14 38 chr5 40519371 40519580 -159110570 - MIR SINE MIR -56 206 3 38 51 0 0 chr5 40519742 40519801 -159110349 + AT_rich Low_complexity Low_complexity 1 59 0 285 51 0 0 chr5 40520266 40520305 -159109845 + (CA)n Simple_repeat Simple_repeat 2 40 0 216 286 0 48 chr5 40521027 40521111 -159109039 + MIR SINE MIR 119 198 -64 2014 117 3 51 chr5 40521508 40521824 -159108326 + AluSx SINE Alu 1 301 -11 1170 252 28 38 chr5 40521829 40522151 -159107999 - L1MC4 LINE L1 -27 8015 7696 1822 162 10 3 chr5 40522151 40522448 -159107702 - AluSx SINE Alu -9 303 5 1170 252 28 38 chr5 40522448 40522518 -159107632 - L1MC4 LINE L1 -346 7696 7627 527 204 142 37 chr5 40523419 40523581 -159106569 + MIR3 SINE MIR 29 207 -1 1764 149 33 33 chr5 40524329 40524414 -159105736 - MER44D DNA MER2_type -1883 608 524 1962 134 84 0 chr5 40524414 40524735 -159105415 - MER7A DNA MER2_type 0 346 1 1764 149 33 33 chr5 40524735 40524985 -159105165 - MER44D DNA MER2_type -1966 525 3 378 300 25 50 chr5 40525082 40525202 -159104948 - L2 LINE L2 0 3272 3156 2481 77 0 0 chr5 40525241 40525551 -159104599 + AluSg SINE Alu 1 310 0 2034 129 3 10 chr5 40526392 40526703 -159103447 + AluSx SINE Alu 1 309 -3 190 280 56 65 chr5 40526736 40526843 -159103307 - L2 LINE L2 -813 2501 2396 1040 185 43 56 chr5 40527059 40527291 -159102859 + AluJo SINE Alu 1 229 -83 186 291 93 0 chr5 40527306 40527392 -159102758 - L2 LINE L2 -1477 1837 1744 310 282 9 9 chr5 40528295 40528405 -159101745 + CT-rich Low_complexity Low_complexity 2 111 0 211 318 0 0 chr5 40529203 40529247 -159100903 + L2 LINE L2 3210 3253 -19 457 271 159 0 chr5 40529410 40529561 -159100589 + MER5A DNA MER1_type 9 183 -6 22 0 0 0 chr5 40530027 40530049 -159100101 + AT_rich Low_complexity Low_complexity 1 22 0 2243 111 0 0 chr5 40530550 40530838 -159099312 + AluSx SINE Alu 1 288 -24 266 210 16 0 chr5 40530908 40530970 -159099180 - L1ME LINE L1 -338 5828 5766 291 234 25 120 chr5 40531422 40531516 -159098634 - Charlie8 DNA MER1_type -137 193 118 1475 176 62 18 chr5 40531516 40531789 -159098361 - AluJo SINE Alu -27 285 1 291 234 25 120 chr5 40531789 40531852 -159098298 - Charlie8 DNA MER1_type -212 118 51 305 279 24 67 chr5 40531853 40532018 -159098132 - L2 LINE L2 -546 2768 2611 1175 182 46 83 chr5 40532624 40532721 -159097429 + MER2 DNA MER2_type 2 101 -244 1742 175 0 7 chr5 40532721 40533012 -159097138 + AluJb SINE Alu 1 289 -23 1175 182 46 83 chr5 40533012 40533171 -159096979 + MER2 DNA MER2_type 101 244 -101 2347 69 21 0 chr5 40533171 40533461 -159096689 - AluSq SINE Alu -17 296 1 1175 182 46 83 chr5 40533461 40533554 -159096596 + MER2 DNA MER2_type 244 339 -6 705 160 76 105 chr5 40533776 40533963 -159096187 + L1MB4 LINE L1 5950 6130 -50 1860 178 0 10 chr5 40533963 40534267 -159095883 + AluJb SINE Alu 1 301 -11 705 160 76 105 chr5 40534267 40534317 -159095833 + L1MB4 LINE L1 6130 6180 0 25 31 0 0 chr5 40534353 40534385 -159095765 + AT_rich Low_complexity Low_complexity 1 32 0 554 217 104 0 chr5 40534396 40534502 -159095648 + AluSq/x SINE Alu 4 120 -193 25 51 0 0 chr5 40534629 40534668 -159095482 + AT_rich Low_complexity Low_complexity 1 39 0 850 232 32 0 chr5 40534804 40534989 -159095161 + MER58A DNA MER1_type 33 223 -1 216 0 0 0 chr5 40537878 40537902 -159092248 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 312 237 103 10 chr5 40538083 40538180 -159091970 - MIR SINE MIR -71 191 86 2458 64 3 0 chr5 40538432 40538730 -159091420 + AluSp SINE Alu 1 299 -14 310 281 52 7 chr5 40540069 40540204 -159089946 - L1MC5 LINE L1 -89 7872 7732 2490 66 10 0 chr5 40540211 40540514 -159089636 - AluY SINE Alu -5 306 1 2383 75 3 0 chr5 40540707 40541000 -159089150 + AluSg SINE Alu 1 294 -16 275 340 39 0 chr5 40541943 40542046 -159088104 - MIR SINE MIR -68 140 34 182 315 108 23 chr5 40542878 40543008 -159087142 - L2 LINE L2 -956 2358 2218 194 280 0 20 chr5 40543244 40543294 -159086856 - L2 LINE L2 -2100 1214 1166 195 311 184 10 chr5 40543363 40543569 -159086581 - L2 LINE L2 -2341 973 732 223 209 0 0 chr5 40543664 40543707 -159086443 - L2 LINE L2 0 3313 3271 1693 161 75 11 chr5 40543994 40544274 -159085876 + AluJb SINE Alu 1 298 -14 230 301 217 63 chr5 40544358 40544754 -159085396 - L2 LINE L2 -341 2973 2517 377 214 201 56 chr5 40545116 40545439 -159084711 - HAL1 LINE L1 -59 2448 2079 1040 250 140 14 chr5 40545561 40546005 -159084145 - HAL1 LINE L1 -634 1873 1374 725 186 0 0 chr5 40546021 40546139 -159084011 + FLAM_C SINE Alu 1 118 -25 236 261 121 45 chr5 40546161 40546517 -159083633 - HAL1 LINE L1 -1138 1369 987 2111 104 4 4 chr5 40546549 40546855 -159083295 + AluSc SINE Alu 1 306 0 1922 143 6 37 chr5 40547287 40547609 -159082541 + AluJo SINE Alu 1 312 0 2081 136 48 0 chr5 40547641 40547936 -159082214 - AluSx SINE Alu -2 310 2 322 357 80 28 chr5 40548025 40548238 -159081912 - HAL1 LINE L1 -1511 996 773 643 187 161 7 chr5 40548261 40548416 -159081734 - MER58A DNA MER1_type 0 224 46 348 307 57 80 chr5 40548706 40548882 -159081268 - HAL1 LINE L1 -2299 208 37 2204 140 0 7 chr5 40548932 40549240 -159080910 - AluJb SINE Alu -5 307 2 734 129 32 32 chr5 40549240 40549364 -159080786 - AluJo SINE Alu -177 135 12 5988 89 14 2 chr5 40549374 40550696 -159079454 - L1PA11 LINE L1 -1 6173 4836 21 57 0 0 chr5 40551252 40551287 -159078863 + AT_rich Low_complexity Low_complexity 1 35 0 427 343 42 15 chr5 40551415 40551747 -159078403 + L1MEc LINE L1 207 547 -6016 395 177 204 26 chr5 40552347 40552364 -159077786 + L1MEc LINE L1 799 812 -5472 479 196 137 10 chr5 40552364 40552490 -159077660 + FLAM_C SINE Alu 2 140 0 395 177 204 26 chr5 40552490 40552644 -159077506 + L1MEc LINE L1 812 989 -5295 2184 104 0 27 chr5 40552650 40552948 -159077202 - AluSx SINE Alu -22 290 1 513 250 3 35 chr5 40552963 40553181 -159076969 + L1MEc LINE L1 1275 1448 -4832 804 104 16 6 chr5 40553184 40553434 -159076716 + AluSx SINE Alu 1 294 -15 316 266 53 4 chr5 40553442 40553596 -159076554 + L1MEc LINE L1 1641 1759 -4623 1236 186 55 6 chr5 40553601 40553913 -159076237 + L1 LINE L1 4575 4901 -1245 535 98 0 0 chr5 40553913 40553995 -159076155 - LTR9B LTR ERV1 -562 82 1 698 143 39 77 chr5 40553996 40554178 -159075972 + L1MEc LINE L1 2453 2627 -3755 671 254 11 0 chr5 40554194 40554383 -159075767 + L1PBa LINE L1 7 197 -6666 * 7581 143 35 14 chr5 40554380 40555823 -159074327 + L1PBa LINE L1 1392 2875 -3987 2121 96 32 7 chr5 40555823 40556104 -159074046 + AluSg SINE Alu 1 288 -22 7581 143 35 14 chr5 40556104 40556323 -159073827 + L1PBa LINE L1 2875 3088 -3774 2342 166 11 9 chr5 40557253 40557711 -159072439 + L1MEc LINE L1 2598 3056 -3326 2011 183 81 33 chr5 40557711 40558193 -159071957 + LTR22 LTR ERVK 1 505 -4 3622 132 29 5 chr5 40558198 40558789 -159071361 + HERVK22 LTR ERVK 1 605 -6232 2445 65 0 0 chr5 40558790 40559081 -159071069 - AluY SINE Alu -20 291 1 16812 91 9 0 chr5 40559083 40561450 -159068700 + HERVK22 LTR ERVK 694 3081 -3756 25120 97 8 8 chr5 40561460 40565091 -159065059 + HERVK22 LTR ERVK 3205 6837 0 1882 179 80 66 chr5 40565091 40565589 -159064561 + LTR22 LTR ERVK 1 505 -4 10307 196 17 2 chr5 40565594 40568327 -159061823 + L1P5 LINE L1 3051 5822 -565 237 132 0 0 chr5 40568334 40568383 -159061767 + L1PBa LINE L1 3094 3142 -3720 781 141 0 63 chr5 40568392 40568534 -159061616 + FLAM_C SINE Alu 1 133 0 298 207 0 0 chr5 40568559 40568617 -159061533 + L1 LINE L1 3373 3430 -3432 2399 146 72 16 chr5 40568657 40569145 -159061005 + L1M1 LINE L1 2052 2566 -4283 2928 194 16 69 chr5 40569147 40569437 -159060713 + L1M1 LINE L1 2816 3120 -3728 2387 92 0 0 chr5 40569437 40569741 -159060409 + AluSg1 SINE Alu 1 304 -5 2928 194 16 69 chr5 40569741 40570441 -159059709 + L1M1 LINE L1 3120 3912 -2936 21131 144 32 12 chr5 40570451 40573503 -159056647 - L1PA11 LINE L1 -2 6172 2985 2144 145 0 0 chr5 40573503 40573813 -159056337 - AluSx SINE Alu -2 310 1 21131 144 32 12 chr5 40573813 40575640 -159054510 - L1PA11 LINE L1 -3189 2985 1197 2042 120 0 7 chr5 40575646 40575930 -159054220 + AluSx SINE Alu 6 287 -25 2023 110 0 57 chr5 40575949 40576249 -159053901 + AluSq SINE Alu 1 283 -30 2629 159 23 63 chr5 40576261 40576345 -159053805 + L1M1 LINE L1 5443 5529 -1473 1845 169 10 3 chr5 40576345 40576653 -159053497 + AluJb SINE Alu 1 310 -2 2629 159 23 63 chr5 40576653 40577659 -159052491 + L1M1 LINE L1 5529 6481 -521 1104 96 6 0 chr5 40577659 40577805 -159052345 + L1MA4 LINE L1 6127 6293 -7 977 175 142 12 chr5 40577909 40578149 -159052001 - Charlie1 DNA MER1_type -219 2542 2272 195 69 0 0 chr5 40579141 40579170 -159050980 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 254 50 25 0 chr5 40579522 40579562 -159050588 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 210 37 0 0 chr5 40579830 40579857 -159050293 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 877 258 322 13 chr5 40580761 40580988 -159049162 + L2 LINE L2 2174 2330 -984 2200 112 3 0 chr5 40580988 40581282 -159048868 - AluSx SINE Alu -17 295 1 877 258 322 13 chr5 40581282 40581656 -159048494 + L2 LINE L2 2330 2961 -353 22 35 0 0 chr5 40581781 40581810 -159048340 + AT_rich Low_complexity Low_complexity 1 29 0 233 245 0 0 chr5 40581943 40581992 -159048158 + L2 LINE L2 3261 3309 -4 * 488 208 31 0 chr5 40581991 40582087 -159048063 - MIR SINE MIR -76 186 88 2594 56 0 0 chr5 40582129 40582432 -159047718 - AluY SINE Alu -8 303 1 2445 62 0 19 chr5 40582443 40582751 -159047399 - AluY SINE Alu -9 302 1 2506 101 22 6 chr5 40584466 40584824 -159045326 + THE1B LTR MaLR 1 364 0 230 336 67 0 chr5 40584913 40585032 -159045118 + L1MEd LINE L1 895 1021 -5098 2224 97 0 0 chr5 40585138 40585436 -159044714 - AluSc SINE Alu 0 298 1 380 281 33 8 chr5 40585492 40585613 -159044537 + MIR SINE MIR 139 262 0 208 241 84 60 chr5 40585633 40585716 -159044434 + MIR SINE MIR 92 176 -86 296 301 105 23 chr5 40585728 40585861 -159044289 - MIR SINE MIR -106 156 13 23 0 0 0 chr5 40585912 40585935 -159044215 + AT_rich Low_complexity Low_complexity 1 23 0 2181 117 3 0 chr5 40585943 40586243 -159043907 + AluSx SINE Alu 1 301 -11 186 279 82 33 chr5 40586830 40586891 -159043259 - MIR SINE MIR -152 110 47 2209 112 10 3 chr5 40586914 40587218 -159042932 - AluSc SINE Alu -3 306 1 1700 167 0 69 chr5 40587330 40587530 -159042620 + AluJb SINE Alu 1 173 -139 2169 138 0 3 chr5 40587530 40587841 -159042309 + AluSx SINE Alu 3 312 0 1700 167 0 69 chr5 40587841 40587957 -159042193 + AluJb SINE Alu 173 295 -17 1659 144 26 46 chr5 40589438 40589743 -159040407 + AluJo SINE Alu 1 299 -13 671 220 43 0 chr5 40589854 40589995 -159040155 + MIR SINE MIR 29 175 -87 2467 74 0 0 chr5 40590038 40590337 -159039813 - AluSc SINE Alu -10 299 1 2289 95 3 16 chr5 40590714 40591020 -159039130 + AluSp SINE Alu 1 302 -11 2452 69 0 7 chr5 40591029 40591333 -159038817 + AluY SINE Alu 1 302 -9 823 207 12 6 chr5 40591749 40591918 -159038232 + FAM SINE Alu 1 170 -5 1371 65 0 6 chr5 40593207 40593376 -159036774 - AluSq SINE Alu -15 298 131 575 103 4 1 chr5 40593997 40594231 -159035919 + AluSx SINE Alu 41 304 -5 1293 188 92 37 chr5 40594880 40595151 -159034999 - AluJo SINE Alu -26 286 1 333 136 0 0 chr5 40595252 40595318 -159034832 + (CA)n Simple_repeat Simple_repeat 2 67 0 1541 175 4 18 chr5 40595852 40596132 -159034018 - AluJo SINE Alu -1 311 36 691 87 10 0 chr5 40597094 40597197 -159032953 - L1MA2 LINE L1 0 6304 6201 1718 169 17 14 chr5 40597269 40597565 -159032585 + AluJb SINE Alu 1 297 -15 911 288 48 31 chr5 40597585 40597977 -159032173 + LTR16B LTR ERVL 66 464 0 576 222 86 0 chr5 40598029 40598146 -159032004 + FLAM_A SINE Alu 1 127 -6 1678 205 116 0 chr5 40598243 40598604 -159031546 + MER68 LTR ERV1 160 562 0 295 255 74 54 chr5 40598604 40598749 -159031401 + LTR16B LTR ERVL 317 464 0 2419 87 10 6 chr5 40598817 40599129 -159031021 - AluSq SINE Alu 0 313 1 216 0 0 0 chr5 40599142 40599166 -159030984 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1221 182 5 5 chr5 40599173 40599376 -159030774 + AluJb SINE Alu 103 305 -7 22 56 0 0 chr5 40599426 40599462 -159030688 + AT_rich Low_complexity Low_complexity 1 36 0 321 100 0 0 chr5 40599479 40599529 -159030621 - AluJo SINE Alu -161 141 92 5845 127 37 9 chr5 40599774 40599892 -159030258 + L1PB1 LINE L1 4469 4582 -1569 1983 124 40 7 chr5 40599892 40600190 -159029960 + AluSx SINE Alu 5 312 0 5845 127 37 9 chr5 40600190 40601701 -159028449 + L1PB1 LINE L1 4582 6144 -7 21 36 0 0 chr5 40602822 40602850 -159027300 + AT_rich Low_complexity Low_complexity 1 28 0 2218 92 7 3 chr5 40602850 40603143 -159027007 - AluSq SINE Alu -19 294 1 821 179 8 0 chr5 40603148 40603271 -159026879 - FLAM_C SINE Alu -19 124 1 9563 210 77 27 chr5 40603560 40603651 -159026499 - L1P LINE L1 -776 5379 5294 2535 48 0 10 chr5 40603651 40603960 -159026190 - AluY SINE Alu -5 306 1 9563 210 77 27 chr5 40603960 40604811 -159025339 - L1P LINE L1 -861 5294 4486 306 50 0 0 chr5 40604811 40604851 -159025299 + (TG)n Simple_repeat Simple_repeat 2 41 0 9563 210 77 27 chr5 40604851 40606108 -159024042 - L1P LINE L1 -1669 4486 3292 2340 94 10 0 chr5 40606108 40606406 -159023744 - AluSp SINE Alu -12 301 1 9563 210 77 27 chr5 40606406 40606641 -159023509 - L1P LINE L1 -2863 3292 3070 2132 116 42 53 chr5 40606641 40606866 -159023284 - THE1C LTR MaLR 0 375 154 2201 117 7 0 chr5 40606866 40607165 -159022985 + AluSc SINE Alu 1 301 -8 2132 116 42 53 chr5 40607165 40607318 -159022832 - THE1C LTR MaLR -221 154 1 10471 104 44 5 chr5 40607318 40608838 -159021312 - THE1C-int LTR MaLR 0 1580 1 2482 116 8 16 chr5 40608838 40609216 -159020934 - THE1C LTR MaLR 0 375 1 9563 210 77 27 chr5 40609216 40609700 -159020450 - L1P LINE L1 -3084 3071 2299 24 32 0 0 chr5 40610685 40610716 -159019434 + AT_rich Low_complexity Low_complexity 1 31 0 1703 179 11 0 chr5 40610878 40611163 -159018987 - AluJo SINE Alu -24 288 1 972 55 34 20 chr5 40612130 40612276 -159017874 - MER30 DNA MER1_type -74 156 9 186 218 195 11 chr5 40612709 40612796 -159017354 - MIR SINE MIR -46 216 114 538 251 82 27 chr5 40613127 40613286 -159016864 + MIR SINE MIR 98 262 0 617 355 98 28 chr5 40614025 40614638 -159015512 + L1MEd LINE L1 132 845 -5360 621 263 39 42 chr5 40614774 40614965 -159015185 + L1MEd LINE L1 981 1172 -5033 2170 123 0 3 chr5 40614965 40615266 -159014884 + AluSp SINE Alu 1 300 -13 621 263 39 42 chr5 40615266 40615386 -159014764 + L1MEd LINE L1 1172 1291 -4914 2141 105 34 0 chr5 40615441 40615736 -159014414 + AluY SINE Alu 1 305 -6 2471 67 0 0 chr5 40615883 40616182 -159013968 + AluY SINE Alu 1 299 -12 2188 109 0 13 chr5 40616337 40616641 -159013509 + AluSc SINE Alu 1 300 -9 1181 131 0 0 chr5 40616745 40616905 -159013245 - FAM SINE Alu -12 163 4 502 303 113 40 chr5 40616932 40617259 -159012891 + L1MEd LINE L1 2043 2393 -4003 1406 211 40 59 chr5 40617261 40617497 -159012653 + L1MC5 LINE L1 7345 7584 -377 2382 89 0 0 chr5 40617497 40617790 -159012360 - AluSg SINE Alu -17 293 1 1406 211 40 59 chr5 40617790 40618150 -159012000 + L1MC5 LINE L1 7584 7930 -31 417 303 46 16 chr5 40618169 40618661 -159011489 + L1MEd LINE L1 2387 2899 -3316 243 0 0 0 chr5 40619285 40619312 -159010838 + (A)n Simple_repeat Simple_repeat 1 27 0 313 242 217 32 chr5 40619805 40619962 -159010188 - MIR3 SINE MIR -10 198 13 2079 130 0 0 chr5 40620083 40620368 -159009782 + AluSx SINE Alu 2 286 -26 1549 135 93 32 chr5 40620464 40620544 -159009606 - MER44D DNA MER2_type -1890 601 527 1698 147 74 21 chr5 40620544 40620870 -159009280 + MER2 DNA MER2_type 2 344 0 1549 135 93 32 chr5 40620870 40621101 -159009049 - MER44D DNA MER2_type -1964 527 1 211 171 0 0 chr5 40621259 40621294 -159008856 - L2 LINE L2 -7 3306 3272 244 298 127 53 chr5 40621515 40621825 -159008325 + L2 LINE L2 2048 2403 -911 216 97 0 0 chr5 40621825 40621856 -159008294 + (CA)n Simple_repeat Simple_repeat 2 32 0 244 298 127 53 chr5 40621856 40621995 -159008155 + L2 LINE L2 2403 2530 -784 633 235 12 47 chr5 40622081 40622251 -159007899 + MER5A DNA MER1_type 26 189 0 227 282 202 27 chr5 40622260 40622448 -159007702 + L2 LINE L2 2633 2853 -461 452 322 29 12 chr5 40622695 40622866 -159007284 + L2 LINE L2 3140 3313 0 904 120 0 0 chr5 40623080 40623205 -159006945 + AluJb SINE Alu 1 125 -187 1383 178 13 9 chr5 40623493 40623724 -159006426 - AluJo SINE Alu -17 295 64 25 31 0 0 chr5 40623867 40623899 -159006251 + AT_rich Low_complexity Low_complexity 1 32 0 1534 221 10 10 chr5 40623925 40624232 -159005918 + AluJo SINE Alu 6 312 0 671 216 16 46 chr5 40624489 40624683 -159005467 + L1MEd LINE L1 3523 3710 -2505 1216 159 24 0 chr5 40624729 40624937 -159005213 + MER20 DNA MER1_type 6 218 -1 681 295 216 30 chr5 40625710 40625782 -159004368 + L2 LINE L2 1917 1974 -1340 879 130 15 0 chr5 40625782 40625913 -159004237 - FLAM_C SINE Alu 0 133 1 681 295 216 30 chr5 40625913 40626630 -159003520 + L2 LINE L2 1974 2853 -461 1950 167 0 0 chr5 40626688 40626988 -159003162 - AluJo SINE Alu -12 300 1 232 192 110 41 chr5 40627106 40627179 -159002971 - MIR SINE MIR -138 124 47 1922 172 0 3 chr5 40627635 40627925 -159002225 + AluJo SINE Alu 1 289 -23 31 26 0 0 chr5 40627935 40627973 -159002177 + AT_rich Low_complexity Low_complexity 1 38 0 1323 154 14 0 chr5 40628046 40628267 -159001883 + L1PA16 LINE L1 5940 6163 -3 234 0 0 0 chr5 40629246 40629272 -159000878 + (A)n Simple_repeat Simple_repeat 1 26 0 346 138 0 85 chr5 40630078 40630104 -159000046 - L1MB7 LINE L1 -11 6173 6146 2304 85 17 3 chr5 40630104 40630397 -158999753 - AluY SINE Alu -14 297 1 346 138 0 85 chr5 40630397 40630408 -158999742 - L1MB7 LINE L1 -38 6146 6136 2927 6 0 0 chr5 40630408 40630724 -158999426 - AluYb8 SINE Alu -2 316 1 346 138 0 85 chr5 40630724 40630779 -158999371 - L1MB7 LINE L1 -48 6136 6088 33 43 0 0 chr5 40631400 40631447 -158998703 + AT_rich Low_complexity Low_complexity 1 47 0 1887 133 0 40 chr5 40631594 40631894 -158998256 + AluSx SINE Alu 9 296 -16 253 187 55 33 chr5 40631942 40631985 -158998165 + L1ME4a LINE L1 5389 5430 -2378 2565 60 0 0 chr5 40631985 40632284 -158997866 - AluY SINE Alu -12 299 1 253 187 55 33 chr5 40632284 40632331 -158997819 + L1ME4a LINE L1 5430 5481 -2327 257 254 118 0 chr5 40633052 40633162 -158996988 + L1ME4a LINE L1 5968 6090 -31 2301 95 0 0 chr5 40633998 40634293 -158995857 - AluSx SINE Alu -17 295 1 292 350 25 61 chr5 40634356 40634553 -158995597 - L2 LINE L2 -496 2818 2629 1283 232 87 100 chr5 40634893 40635504 -158994646 + MER21B LTR ERV1 1 603 -260 1696 190 3 7 chr5 40636136 40636426 -158993724 + AluJo SINE Alu 1 289 -23 26 0 0 0 chr5 40636426 40636452 -158993698 + AT_rich Low_complexity Low_complexity 1 26 0 1863 146 18 26 chr5 40637703 40638045 -158992105 + MER44D DNA MER2_type 1 609 0 22 35 0 0 chr5 40638910 40638939 -158991211 + AT_rich Low_complexity Low_complexity 1 29 0 815 137 0 72 chr5 40639384 40639523 -158990627 - FLAM_C SINE Alu -14 129 1 373 262 52 86 chr5 40641725 40641992 -158988158 + L1ME4a LINE L1 5863 6120 -1 1914 109 12 0 chr5 40642148 40642405 -158987745 + AluSg SINE Alu 38 297 -13 2159 72 48 0 chr5 40642443 40642733 -158987417 + AluY SINE Alu 1 304 -7 205 290 81 0 chr5 40642758 40642820 -158987330 + MIR3 SINE MIR 119 185 -23 338 255 103 48 chr5 40642872 40643017 -158987133 - MIR SINE MIR 0 262 110 28 0 0 0 chr5 40643043 40643071 -158987079 + AT_rich Low_complexity Low_complexity 1 28 0 2259 79 7 3 chr5 40643077 40643368 -158986782 + AluSq SINE Alu 14 305 -8 21 36 0 0 chr5 40643377 40643405 -158986745 + AT_rich Low_complexity Low_complexity 1 28 0 202 348 33 33 chr5 40643406 40643498 -158986652 - MIR3 SINE MIR -103 105 14 398 79 13 13 chr5 40643518 40643594 -158986556 + L1MA4A LINE L1 6225 6300 -3 271 260 41 0 chr5 40645521 40645594 -158984556 + L2 LINE L2 3238 3313 0 265 177 151 4 chr5 40645822 40645895 -158984255 + FRAM/FAM SINE Alu 16 65 -101 429 92 79 0 chr5 40645895 40645971 -158984179 + AluS SINE Alu 1 82 -231 203 358 6 12 chr5 40646103 40646276 -158983874 + CT-rich Low_complexity Low_complexity 1 172 0 462 186 0 0 chr5 40647111 40647197 -158982953 - L1ME3A LINE L1 -10 6160 6075 603 168 8 40 chr5 40647438 40647563 -158982587 - FLAM_A SINE Alu 0 142 22 2014 85 38 24 chr5 40647937 40648230 -158981920 + AluY SINE Alu 1 297 -14 1299 171 21 39 chr5 40648510 40648796 -158981354 - AluJo SINE Alu -30 282 2 1037 143 6 12 chr5 40649653 40649814 -158980336 + AluJb SINE Alu 1 160 -152 183 156 0 0 chr5 40649839 40649871 -158980279 + A-rich Low_complexity Low_complexity 1 32 0 2387 85 0 0 chr5 40650062 40650357 -158979793 - AluY SINE Alu -16 295 1 1662 129 19 15 chr5 40651360 40651624 -158978526 + AluSx SINE Alu 48 312 0 1617 143 61 54 chr5 40651642 40651936 -158978214 + AluJo SINE Alu 5 300 -12 1823 162 7 23 chr5 40652062 40652365 -158977785 - AluJo SINE Alu -14 298 1 13591 66 10 27 chr5 40653559 40655530 -158974620 + HERVL LTR ERVL 2085 4021 -1633 2231 79 0 0 chr5 40655533 40655812 -158974338 - AluSx SINE Alu -17 295 17 1574 111 9 0 chr5 40655913 40656129 -158974021 - AluSx SINE Alu -94 218 1 404 95 32 0 chr5 40656129 40656192 -158973958 + MSTB1 LTR MaLR 364 428 -4 2088 145 0 19 chr5 40656582 40656900 -158973250 - AluJb SINE Alu 0 312 1 1887 165 3 19 chr5 40657400 40657716 -158972434 + AluJb SINE Alu 2 312 0 2014 127 0 36 chr5 40657716 40658024 -158972126 + AluSx SINE Alu 1 297 -15 1605 186 14 11 chr5 40658024 40658303 -158971847 - AluJo SINE Alu -31 281 1 2305 77 0 14 chr5 40658338 40658635 -158971515 - AluY SINE Alu -18 293 1 2782 139 58 36 chr5 40658635 40659238 -158970912 - L1PB4 LINE L1 -28 6128 5513 305 259 138 9 chr5 40659407 40659523 -158970627 - L1ME3A LINE L1 -2059 5749 5619 845 161 10 120 chr5 40659530 40659569 -158970581 - AluJo SINE Alu -139 173 131 2403 97 0 0 chr5 40659569 40659869 -158970281 - AluSg SINE Alu -10 300 1 845 161 10 120 chr5 40659869 40660021 -158970129 - AluJo SINE Alu -181 131 3 2313 104 0 7 chr5 40660143 40660451 -158969699 - AluSq SINE Alu -7 306 1 2978 167 35 7 chr5 40660512 40661052 -158969098 - MER68 LTR ERV1 -7 555 1 21 0 0 0 chr5 40661079 40661100 -158969050 + AT_rich Low_complexity Low_complexity 1 21 0 2301 93 3 10 chr5 40661112 40661422 -158968728 - AluSq SINE Alu -5 308 1 2208 92 0 3 chr5 40661475 40661793 -158968357 - AluSx SINE Alu 0 317 1 290 300 58 8 chr5 40662147 40662267 -158967883 - L2 LINE L2 -1 3312 3187 1911 124 3 18 chr5 40662675 40662958 -158967192 - AluJb SINE Alu -33 279 1 1914 164 0 16 chr5 40663087 40663399 -158966751 + AluSx SINE Alu 5 311 -1 243 146 0 0 chr5 40663456 40663497 -158966653 + (A)n Simple_repeat Simple_repeat 1 41 0 1467 142 8 23 chr5 40663632 40663871 -158966279 - Tigger2 DNA MER2_type 0 2718 2482 2274 107 7 0 chr5 40663871 40664169 -158965981 + AluSp SINE Alu 1 300 -13 1467 142 8 23 chr5 40664169 40664189 -158965961 - Tigger2 DNA MER2_type -236 2482 2463 3764 167 26 23 chr5 40664253 40664732 -158965418 - Tigger2 DNA MER2_type -1974 744 261 1821 148 0 46 chr5 40664732 40665037 -158965113 - AluJb SINE Alu -21 291 1 3764 167 26 23 chr5 40665037 40665299 -158964851 - Tigger2 DNA MER2_type -2457 261 1 26 50 0 0 chr5 40665890 40665930 -158964220 + AT_rich Low_complexity Low_complexity 1 40 0 370 221 0 0 chr5 40665930 40665998 -158964152 - FLAM_A SINE Alu -8 125 58 860 105 0 0 chr5 40665998 40666112 -158964038 - AluSp/q SINE Alu -17 296 183 5044 226 41 3 chr5 40666271 40667529 -158962621 - L1M2 LINE L1 -4464 2385 1080 501 339 17 13 chr5 40667911 40668144 -158962006 - L1M2 LINE L1 -6419 430 197 1875 157 10 22 chr5 40668242 40668555 -158961595 - AluJo SINE Alu -3 309 1 2096 128 0 7 chr5 40668569 40668874 -158961276 - AluSg1 SINE Alu -6 303 1 47 0 0 0 chr5 40669300 40669347 -158960803 + AT_rich Low_complexity Low_complexity 1 47 0 198 103 0 0 chr5 40671420 40671449 -158958701 + (T)n Simple_repeat Simple_repeat 1 29 0 593 271 111 76 chr5 40671473 40671687 -158958463 - L2 LINE L2 -69 3244 3039 2294 62 0 36 chr5 40671687 40671991 -158958159 - AluY SINE Alu -18 293 1 593 271 111 76 chr5 40671991 40672142 -158958008 - L2 LINE L2 -274 3039 2895 1521 169 48 11 chr5 40672142 40672481 -158957669 + AluJb SINE Alu 1 349 0 593 271 111 76 chr5 40672481 40672636 -158957514 - L2 LINE L2 -418 2895 2696 180 300 12 100 chr5 40673446 40673526 -158956624 - L2 LINE L2 -67 3205 3133 395 184 135 80 chr5 40673639 40673802 -158956348 + MER112 DNA MER1_type 77 248 -12 834 200 130 0 chr5 40674291 40674476 -158955674 + MER3 DNA MER1_type 1 209 0 1016 168 6 0 chr5 40674509 40674670 -158955480 + AluJb SINE Alu 135 296 -16 2206 119 0 3 chr5 40675353 40675665 -158954485 - AluSx SINE Alu -1 311 1 25 0 0 0 chr5 40675776 40675801 -158954349 + AT_rich Low_complexity Low_complexity 1 25 0 258 281 16 0 chr5 40675949 40676013 -158954137 - L3 LINE CR1 -11 1566 1502 354 281 39 45 chr5 40676437 40676615 -158953535 + L1MEd LINE L1 2 178 -5941 1607 215 96 15 chr5 40676705 40676722 -158953428 + L1ME1 LINE L1 5664 5678 -488 1876 169 3 19 chr5 40676722 40677029 -158953121 + AluJb SINE Alu 1 302 -10 1607 215 96 15 chr5 40677029 40677471 -158952679 + L1ME1 LINE L1 5678 6157 -9 257 254 118 0 chr5 40678259 40678369 -158951781 - L1ME4a LINE L1 -31 6090 5968 2546 57 0 0 chr5 40679137 40679433 -158950717 + AluY SINE Alu 1 296 -15 1903 166 7 0 chr5 40679582 40679877 -158950273 + AluJo SINE Alu 1 297 -15 311 183 70 0 chr5 40680676 40680747 -158949403 + L1MC5 LINE L1 7155 7230 -731 2081 123 10 3 chr5 40680908 40681218 -158948932 + AluSx SINE Alu 1 312 0 348 240 107 53 chr5 40681262 40681412 -158948738 + L1MC5 LINE L1 7334 7491 -470 711 169 42 30 chr5 40681857 40682023 -158948127 + MLT1E2 LTR MaLR 457 624 -2 994 153 48 19 chr5 40682057 40682266 -158947884 - L1MB7 LINE L1 -19 6165 5951 22 56 0 0 chr5 40682956 40682992 -158947158 + AT_rich Low_complexity Low_complexity 1 36 0 1068 171 0 0 chr5 40683285 40683461 -158946689 + FRAM SINE Alu 1 171 -5 316 220 93 42 chr5 40683853 40683971 -158946179 + L2 LINE L2 3146 3269 -3 638 321 85 54 chr5 40684035 40684589 -158945561 + MLT1K LTR MaLR 18 588 0 1395 152 0 0 chr5 40685167 40685371 -158944779 - AluJb SINE Alu -15 297 94 1376 133 133 0 chr5 40685480 40685691 -158944459 - AluSx SINE Alu -73 239 1 499 251 59 75 chr5 40686157 40686276 -158943874 - MER112 DNA MER1_type -2 254 135 2333 111 0 3 chr5 40686276 40686583 -158943567 + AluSx SINE Alu 1 306 -6 499 251 59 75 chr5 40686583 40686718 -158943432 - MER112 DNA MER1_type -121 135 4 1431 152 20 48 chr5 40686848 40687098 -158943052 + AluJo SINE Alu 1 243 -69 4563 111 90 126 chr5 40687233 40687810 -158942340 + Tigger3b DNA MER2_type 2 598 -2430 751 156 7 30 chr5 40687810 40687945 -158942205 + AluJo SINE Alu 1 132 -170 1797 168 13 0 chr5 40687948 40688246 -158941904 + AluSx SINE Alu 1 302 -10 560 217 8 42 chr5 40688252 40688372 -158941778 + AluJo SINE Alu 141 256 -56 4563 111 90 126 chr5 40688372 40688767 -158941383 + Tigger3b DNA MER2_type 605 1064 -167 785 143 0 0 chr5 40688798 40688910 -158941240 - FAM SINE Alu -19 166 55 741 195 104 0 chr5 40688911 40689065 -158941085 + Tigger3b DNA MER2_type 1061 1230 -1 2369 65 34 0 chr5 40689142 40689435 -158940715 + AluY SINE Alu 1 303 -8 2123 89 10 17 chr5 40689446 40689737 -158940413 + AluSg SINE Alu 1 289 -21 2117 148 0 0 chr5 40689932 40690236 -158939914 + AluSx SINE Alu 1 304 -8 957 160 6 29 chr5 40690288 40690463 -158939687 - FRAM SINE Alu -5 171 1 2321 111 0 7 chr5 40690474 40690781 -158939369 - AluSg SINE Alu -5 305 1 981 157 54 0 chr5 40691218 40691384 -158938766 - FAM SINE Alu 0 175 1 1511 62 10 16 chr5 40691430 40691624 -158938526 + AluY SINE Alu 1 193 -118 2304 89 3 3 chr5 40691822 40692114 -158938036 + AluSg SINE Alu 1 292 -18 405 172 99 6 chr5 40692493 40692725 -158937425 + AluJo SINE Alu 1 297 -5 512 92 64 29 chr5 40693423 40693596 -158936554 + (TA)n Simple_repeat Simple_repeat 2 180 0 2428 72 3 0 chr5 40693608 40693900 -158936250 - AluSp SINE Alu -19 294 2 896 213 35 0 chr5 40694495 40694669 -158935481 + AluJo SINE Alu 119 298 -14 1991 51 31 8 chr5 40694669 40694923 -158935227 + AluY SINE Alu 50 309 -2 486 0 0 0 chr5 40695049 40695103 -158935047 + (TA)n Simple_repeat Simple_repeat 1 54 0 1901 171 3 28 chr5 40695908 40696235 -158933915 - 7SLRNA srpRNA srpRNA -1 319 1 482 240 260 0 chr5 40696397 40696438 -158933712 + MER5A DNA MER1_type 1 30 -159 1691 116 4 16 chr5 40696438 40696689 -158933461 + AluSx SINE Alu 62 309 -3 482 240 260 0 chr5 40696689 40696797 -158933353 + MER5A DNA MER1_type 30 189 0 2038 123 28 3 chr5 40697554 40697839 -158932311 - AluSx SINE Alu -14 298 7 2272 88 0 7 chr5 40697890 40698185 -158931965 - AluSq SINE Alu -20 293 1 682 153 22 22 chr5 40698294 40698431 -158931719 + FAM SINE Alu 1 41 -8 255 233 41 0 chr5 40698488 40698561 -158931589 + L1MC5 LINE L1 7158 7233 -728 193 222 44 0 chr5 40700383 40700428 -158929722 - L2 LINE L2 -12 3301 3255 2345 94 0 0 chr5 40700792 40701090 -158929060 - AluSg SINE Alu -12 298 1 649 172 9 9 chr5 40701376 40701492 -158928658 + MER3 DNA MER1_type 6 121 -88 785 249 9 6 chr5 40701509 40701714 -158928436 - MLT1J1 LTR MaLR -223 227 15 1432 132 21 155 chr5 40701846 40702043 -158928107 + MSTA LTR MaLR 2 171 -255 816 161 0 0 chr5 40702043 40702161 -158927989 + AluSg/x SINE Alu 171 288 -22 1432 132 21 155 chr5 40702161 40702387 -158927763 + MSTA LTR MaLR 171 426 0 214 317 0 0 chr5 40702390 40702450 -158927700 - MER5A DNA MER1_type -2 187 128 1326 131 0 0 chr5 40702453 40702629 -158927521 + AluSx SINE Alu 1 176 -136 2374 94 0 3 chr5 40703002 40703299 -158926851 + AluSx SINE Alu 1 296 -16 1177 137 0 0 chr5 40703299 40703460 -158926690 + AluSg/x SINE Alu 132 292 -18 208 180 20 0 chr5 40703535 40703585 -158926565 + (TA)n Simple_repeat Simple_repeat 2 52 0 2174 129 0 0 chr5 40703645 40703948 -158926202 + AluSx SINE Alu 1 303 -9 2182 150 110 12 chr5 40703948 40704347 -158925803 + MER65A LTR ERV1 8 445 0 884 236 73 63 chr5 40704434 40704855 -158925295 + MER65A-int LTR ERV1 83 564 -4307 2498 68 3 13 chr5 40704855 40705166 -158924984 - AluY SINE Alu -3 308 1 884 236 73 63 chr5 40705166 40705364 -158924786 + MER65A-int LTR ERV1 564 759 -4112 474 198 81 0 chr5 40705364 40705450 -158924700 - AluJ/FLAM SINE Alu -218 94 2 885 161 15 49 chr5 40705597 40705802 -158924348 + MER31-int LTR ERV1 3533 3730 -2868 824 144 6 77 chr5 40705882 40706063 -158924087 + MER31-int LTR ERV1 3730 3897 -2701 417 211 0 0 chr5 40706071 40706147 -158924003 - FLAM_A SINE Alu -22 120 45 437 158 100 25 chr5 40706147 40706267 -158923883 + MER31-int LTR ERV1 3884 4012 -2586 1505 202 80 100 chr5 40706288 40706688 -158923462 + MER31-int LTR ERV1 4602 5008 -1590 2217 129 0 10 chr5 40706688 40706823 -158923327 + AluSq SINE Alu 1 136 -177 2384 87 0 13 chr5 40706823 40707134 -158923016 + AluY SINE Alu 1 307 -4 2217 129 0 10 chr5 40707134 40707308 -158922842 + AluSq SINE Alu 136 307 -6 2220 103 17 0 chr5 40707314 40707606 -158922544 + AluSp SINE Alu 1 297 -16 1505 202 80 100 chr5 40707606 40707657 -158922493 + MER31-int LTR ERV1 5013 5064 -1534 2131 112 0 0 chr5 40707657 40707975 -158922175 - AluSx SINE Alu 0 318 1 1505 202 80 100 chr5 40707975 40708069 -158922081 + MER31-int LTR ERV1 5064 5158 -1440 1745 199 0 3 chr5 40708069 40708375 -158921775 + AluJb SINE Alu 1 305 -7 1505 202 80 100 chr5 40708375 40708564 -158921586 + MER31-int LTR ERV1 5158 5349 -1249 16908 52 4 0 chr5 40708564 40711415 -158918735 - L1PA5 LINE L1 -4 6150 3282 1505 202 80 100 chr5 40711415 40711516 -158918634 + MER31-int LTR ERV1 5349 5451 -1147 250 80 40 0 chr5 40711516 40711566 -158918584 + (TTA)n Simple_repeat Simple_repeat 2 53 0 1894 164 0 0 chr5 40711569 40711849 -158918301 - AluSx SINE Alu -30 282 3 1987 125 28 0 chr5 40711851 40712140 -158918010 - AluSx SINE Alu -15 297 1 1505 202 80 100 chr5 40712140 40712243 -158917907 + MER31-int LTR ERV1 5454 5584 -1014 329 236 0 42 chr5 40712263 40712335 -158917815 + MER31-int LTR ERV1 3884 3952 -984 2396 89 0 0 chr5 40712397 40712700 -158917450 + AluY SINE Alu 1 303 -8 1887 249 77 28 chr5 40712722 40713232 -158916918 + MER31-int LTR ERV1 3598 4132 -739 672 198 90 6 chr5 40713235 40713412 -158916738 + MER31-int LTR ERV1 4240 4431 -440 2751 161 16 31 chr5 40713420 40713577 -158916573 - L1MA3 LINE L1 0 6305 6147 2221 121 0 0 chr5 40713577 40713875 -158916275 + AluSc SINE Alu 1 298 -11 2751 161 16 31 chr5 40713875 40714269 -158915881 - L1MA3 LINE L1 -158 6147 5762 3196 86 20 14 chr5 40714269 40714710 -158915440 - MLT2A1 LTR ERVL 0 444 1 45726 62 6 12 chr5 40714710 40716344 -158913806 - HERVL-A1 LTR ERVL 0 5654 4011 2335 92 0 0 chr5 40716344 40716639 -158913511 + AluSx SINE Alu 1 295 -17 45726 62 6 12 chr5 40716639 40718835 -158911315 - HERVL-A1 LTR ERVL -1643 4011 1802 2344 104 0 0 chr5 40718835 40719134 -158911016 + AluSx SINE Alu 1 299 -13 45726 62 6 12 chr5 40719134 40719524 -158910626 - HERVL-A1 LTR ERVL -3852 1802 1411 2238 111 3 0 chr5 40719524 40719821 -158910329 - AluSx SINE Alu -2 310 13 45726 62 6 12 chr5 40719821 40721289 -158908861 - HERVL-A1 LTR ERVL -4243 1411 1 2661 102 82 5 chr5 40721289 40721329 -158908821 - MLT2A1 LTR ERVL 0 444 409 432 0 0 0 chr5 40721329 40721377 -158908773 + (CA)n Simple_repeat Simple_repeat 2 49 0 2661 102 82 5 chr5 40721377 40721748 -158908402 - MLT2A1 LTR ERVL -35 409 1 415 256 17 26 chr5 40722032 40722149 -158908001 + HsTC2 DNA Tc2 1282 1573 -325 1066 233 115 58 chr5 40722167 40722601 -158907549 - LTR40c LTR ERVL -6 459 1 808 187 30 123 chr5 40722601 40722801 -158907349 + HsTC2 DNA Tc2 1567 1784 -114 2446 76 0 3 chr5 40722801 40723103 -158907047 - AluSc SINE Alu -8 301 1 808 187 30 123 chr5 40723103 40723182 -158906968 + HsTC2 DNA Tc2 1784 1797 -101 2347 110 0 0 chr5 40723182 40723492 -158906658 - AluSg SINE Alu 0 310 1 808 187 30 123 chr5 40723492 40723584 -158906566 + HsTC2 DNA Tc2 1797 1896 -2 1301 148 0 38 chr5 40723799 40724047 -158906103 + AluJb SINE Alu 83 322 0 23 33 0 0 chr5 40724359 40724389 -158905761 + AT_rich Low_complexity Low_complexity 1 30 0 447 141 0 0 chr5 40724531 40724602 -158905548 + AluS SINE Alu 2 72 -246 1753 124 17 27 chr5 40724602 40724901 -158905249 + LTR7 LTR ERV1 153 448 -2 1756 97 0 4 chr5 40724901 40725129 -158905021 + AluSq SINE Alu 72 298 -15 1536 167 52 11 chr5 40725400 40725687 -158904463 - AluJo SINE Alu -13 299 1 2457 207 49 67 chr5 40725888 40726116 -158904034 - L1ME LINE L1 -371 6031 5800 2278 121 0 10 chr5 40726116 40726429 -158903721 - AluSq SINE Alu -3 310 1 2457 207 49 67 chr5 40726429 40726760 -158903390 - L1ME LINE L1 -602 5800 5465 1796 124 83 0 chr5 40726760 40727026 -158903124 - AluSq SINE Alu -25 288 1 2457 207 49 67 chr5 40727026 40727202 -158902948 - L1ME LINE L1 -937 5465 5287 2375 106 0 6 chr5 40727202 40727514 -158902636 + AluSx SINE Alu 1 310 -2 2164 126 7 3 chr5 40727517 40727826 -158902324 + AluSp SINE Alu 1 310 -3 2457 207 49 67 chr5 40727826 40728398 -158901752 - L1ME LINE L1 -1117 5285 4747 763 150 0 0 chr5 40728405 40728518 -158901632 - AluSc SINE Alu -26 283 171 399 206 15 0 chr5 40728518 40728586 -158901564 - AluJ/FLAM SINE Alu -233 69 1 2184 111 3 0 chr5 40728629 40728917 -158901233 - AluSq SINE Alu -24 289 1 1142 238 67 67 chr5 40728918 40729128 -158901022 - L1ME LINE L1 -1747 4635 4427 2266 104 0 3 chr5 40729128 40729427 -158900723 + AluSg SINE Alu 1 298 -12 1142 238 67 67 chr5 40729427 40729577 -158900573 - L1ME LINE L1 -1955 4427 4279 3757 105 0 8 chr5 40729577 40730092 -158900058 - MER9 LTR ERVK 0 511 1 1142 238 67 67 chr5 40730092 40730267 -158899883 - L1ME LINE L1 -2103 4279 1342 2129 119 0 7 chr5 40730815 40731109 -158899041 - AluSg SINE Alu -18 292 1 2234 127 48 20 chr5 40731628 40731982 -158898168 - THE1B LTR MaLR 0 364 1 8189 127 118 17 chr5 40731982 40732289 -158897861 - THE1B-int LTR MaLR 0 1580 1305 2120 108 30 3 chr5 40732289 40732584 -158897566 - AluSx SINE Alu -9 303 1 8189 127 118 17 chr5 40732584 40733712 -158896438 - THE1B-int LTR MaLR -275 1305 1 2183 122 78 23 chr5 40733712 40733750 -158896400 - THE1B LTR MaLR 0 364 330 1507 113 74 58 chr5 40733750 40734007 -158896143 + AluSg SINE Alu 13 273 -37 2183 122 78 23 chr5 40734007 40734313 -158895837 - THE1B LTR MaLR -34 330 1 2098 125 7 0 chr5 40734336 40734624 -158895526 + AluSx SINE Alu 1 290 -22 1567 104 170 4 chr5 40734823 40735082 -158895068 + AluSg SINE Alu 1 302 -8 1208 178 13 18 chr5 40735352 40735518 -158894632 - AluSg/x SINE Alu -12 298 132 2158 126 0 3 chr5 40735518 40735819 -158894331 - AluSx SINE Alu -12 300 1 1208 178 13 18 chr5 40735819 40735877 -158894273 - AluSg/x SINE Alu -178 132 75 2344 86 17 0 chr5 40735886 40736178 -158893972 - AluSp SINE Alu -16 297 1 2255 112 0 0 chr5 40736674 40736968 -158893182 - AluSp SINE Alu -19 294 1 287 349 28 0 chr5 40737094 40737203 -158892947 - L2 LINE L2 -602 2712 2601 2073 120 3 13 chr5 40737500 40737800 -158892350 - AluSx SINE Alu -15 297 1 729 180 0 43 chr5 40738379 40738518 -158891632 + FLAM_C SINE Alu 1 133 0 2224 97 0 27 chr5 40738541 40738840 -158891310 + AluSp SINE Alu 1 291 -22 843 179 61 33 chr5 40738873 40739085 -158891065 + AluJo SINE Alu 85 302 -10 256 288 17 85 chr5 40739142 40739260 -158890890 + MER5A DNA MER1_type 80 189 0 2147 128 3 3 chr5 40739956 40740261 -158889889 + AluSx SINE Alu 1 305 -7 1187 150 5 60 chr5 40740504 40740704 -158889446 - MER5A DNA MER1_type 0 189 1 2168 111 0 10 chr5 40741006 40741303 -158888847 - AluSg SINE Alu -16 294 1 2461 57 3 3 chr5 40741978 40742275 -158887875 - AluY SINE Alu -14 297 1 338 284 56 15 chr5 40743100 40743247 -158886903 + MIR SINE MIR 18 167 -59 24 53 0 0 chr5 40743533 40743571 -158886579 + AT_rich Low_complexity Low_complexity 1 38 0 32 26 0 0 chr5 40743713 40743752 -158886398 + AT_rich Low_complexity Low_complexity 1 39 0 793 206 42 42 chr5 40744010 40744175 -158885975 - FAM SINE Alu -10 165 1 685 168 80 8 chr5 40744220 40744345 -158885805 + L1MB7 LINE L1 5934 6067 -117 7204 55 10 25 chr5 40744466 40746159 -158883991 + SVA Other Other 16 1409 0 1121 107 0 13 chr5 40746336 40746485 -158883665 + AluSq/x SINE Alu 1 147 -165 284 228 0 0 chr5 40746487 40746544 -158883606 + FLAM_A SINE Alu 75 131 -2 1091 158 38 5 chr5 40746570 40746754 -158883396 - AluJo SINE Alu -116 196 7 1815 159 0 3 chr5 40746821 40747125 -158883025 - AluJb SINE Alu 0 303 1 1977 138 3 3 chr5 40747400 40747698 -158882452 + AluSx SINE Alu 1 298 -14 1734 115 77 49 chr5 40749197 40749483 -158880667 + AluSc SINE Alu 1 294 -15 21 36 0 0 chr5 40749570 40749598 -158880552 + AT_rich Low_complexity Low_complexity 1 28 0 1808 87 102 4 chr5 40749600 40749866 -158880284 - L1MA1 LINE L1 -4 6298 6007 1238 173 4 18 chr5 40750094 40750266 -158879884 - AluJb SINE Alu -6 306 136 2284 93 7 10 chr5 40750266 40750567 -158879583 - AluSx SINE Alu -12 300 1 1238 173 4 18 chr5 40750567 40750619 -158879531 - AluJb SINE Alu -176 136 85 393 266 67 110 chr5 40751228 40751530 -158878620 + MLT1J LTR MaLR 51 339 -70 2200 114 3 10 chr5 40751669 40751977 -158878173 - AluSg SINE Alu -4 306 1 1648 174 23 27 chr5 40753107 40753406 -158876744 + AluJb SINE Alu 1 298 -14 2399 96 0 6 chr5 40753409 40753721 -158876429 + AluSx SINE Alu 1 310 -2 354 314 18 47 chr5 40753785 40753954 -158876196 - MIR3 SINE MIR -24 184 21 226 200 62 15 chr5 40754385 40754450 -158875700 + HsTC2 DNA Tc2 915 982 -916 1701 148 3 58 chr5 40754711 40754840 -158875310 + AluJo SINE Alu 7 142 -170 1786 177 7 0 chr5 40754840 40755150 -158875000 + AluSx SINE Alu 1 312 0 1701 148 3 58 chr5 40755150 40755330 -158874820 + AluJo SINE Alu 142 299 -13 1736 164 3 52 chr5 40755550 40755874 -158874276 + AluJo SINE Alu 2 309 -3 2106 119 3 0 chr5 40755911 40756205 -158873945 - AluSg SINE Alu -15 295 1 331 146 0 0 chr5 40756294 40756342 -158873808 + Alu SINE Alu 3 50 -251 2174 141 0 0 chr5 40756356 40756668 -158873482 + AluSx SINE Alu 1 312 0 2297 116 0 3 chr5 40757081 40757392 -158872758 + AluSg SINE Alu 1 310 0 2163 90 12 65 chr5 40757708 40757854 -158872296 + AluSx SINE Alu 1 153 -159 2438 75 13 3 chr5 40757854 40758161 -158871989 + AluY SINE Alu 1 310 -1 2163 90 12 65 chr5 40758161 40758337 -158871813 + AluSx SINE Alu 153 306 -6 1586 138 26 4 chr5 40759208 40759439 -158870711 + AluSg SINE Alu 1 236 -74 1480 196 49 3 chr5 40759492 40759778 -158870372 + AluJo SINE Alu 1 299 -13 241 275 44 44 chr5 40759826 40759917 -158870233 - MIR3 SINE MIR -41 167 77 25 0 0 0 chr5 40760238 40760263 -158869887 + AT_rich Low_complexity Low_complexity 1 25 0 295 253 66 22 chr5 40760337 40760428 -158869722 - MIR3 SINE MIR -4 204 110 272 201 21 167 chr5 40761107 40761173 -158868977 + L1MC5 LINE L1 7110 7145 -816 2098 132 0 3 chr5 40761173 40761483 -158868667 + AluSx SINE Alu 1 309 -3 272 201 21 167 chr5 40761483 40761560 -158868590 + L1MC5 LINE L1 7145 7232 -729 343 254 69 81 chr5 40761668 40762014 -158868136 + L1MC5 LINE L1 7255 7596 -365 1367 144 0 10 chr5 40762065 40762273 -158867877 + AluJb SINE Alu 85 290 -22 2111 105 20 10 chr5 40762585 40762889 -158867261 + AluSx SINE Alu 2 308 -4 291 54 0 0 chr5 40762902 40762939 -158867211 + (TG)n Simple_repeat Simple_repeat 1 37 0 1673 173 3 11 chr5 40762952 40763236 -158866914 - AluJb SINE Alu -30 282 1 21 0 0 0 chr5 40763609 40763630 -158866520 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 40763775 40763797 -158866353 + AT_rich Low_complexity Low_complexity 1 22 0 1711 80 0 13 chr5 40763989 40764213 -158865937 + AluY SINE Alu 1 221 -90 2017 139 0 0 chr5 40764383 40764677 -158865473 + AluSx SINE Alu 1 294 -18 3512 113 87 101 chr5 40764916 40765043 -158865107 + L1MB3 LINE L1 5383 5510 -673 2160 117 10 0 chr5 40765043 40765342 -158864808 + AluSq SINE Alu 1 302 -11 3512 113 87 101 chr5 40765342 40765852 -158864298 + L1MB3 LINE L1 5510 6025 -158 2249 108 0 0 chr5 40765852 40766147 -158864003 - AluSq SINE Alu -18 295 1 3512 113 87 101 chr5 40766147 40766263 -158863887 + L1MB3 LINE L1 6025 6141 -42 2346 89 0 22 chr5 40766263 40766579 -158863571 + AluY SINE Alu 1 309 -2 2238 107 7 3 chr5 40766589 40766899 -158863251 + AluSp SINE Alu 1 311 -2 3512 113 87 101 chr5 40766899 40766944 -158863206 + L1MB3 LINE L1 6150 6183 0 934 179 6 0 chr5 40767071 40767233 -158862917 - AluSg/x SINE Alu -12 300 138 393 192 77 0 chr5 40767497 40767601 -158862549 - L1MB8 LINE L1 -1 6177 6066 419 299 109 58 chr5 40767628 40767848 -158862302 + HAL1 LINE L1 1045 1252 -1255 1224 191 13 13 chr5 40767848 40768079 -158862071 + MER46A DNA MER2_type 2 232 -4 419 299 109 58 chr5 40768079 40768380 -158861770 + HAL1 LINE L1 1252 1593 -914 1529 215 32 29 chr5 40768381 40768757 -158861393 + L1MB8 LINE L1 5802 6178 0 259 164 0 18 chr5 40768841 40768896 -158861254 + L1M4 LINE L1 3877 3930 -2216 1717 180 3 20 chr5 40768966 40769272 -158860878 + AluJb SINE Alu 1 301 -11 1255 208 102 7 chr5 40769288 40769562 -158860588 + AluJo SINE Alu 5 304 -8 2238 87 3 10 chr5 40769579 40769877 -158860273 + AluSp SINE Alu 1 296 -17 1889 166 0 0 chr5 40770450 40770740 -158859410 + AluSx SINE Alu 1 290 -22 2148 96 0 4 chr5 40770823 40771103 -158859047 + AluSc SINE Alu 1 279 -30 2209 97 7 0 chr5 40771250 40771540 -158858610 - AluSp SINE Alu -21 292 1 829 146 8 0 chr5 40771550 40771673 -158858477 - FLAM_C SINE Alu -19 124 1 2503 57 0 0 chr5 40771812 40772109 -158858041 + AluY SINE Alu 1 297 -14 1914 82 0 16 chr5 40772127 40772370 -158857780 + AluSq SINE Alu 55 293 -20 1847 141 0 14 chr5 40772387 40772670 -158857480 + AluSg SINE Alu 1 279 -31 754 171 270 5 chr5 40772670 40772881 -158857269 + L1MB7 LINE L1 5663 5929 -255 376 234 47 0 chr5 40772899 40773070 -158857080 + (TA)n Simple_repeat Simple_repeat 1 179 0 1291 177 28 24 chr5 40773079 40773328 -158856822 + L1MB7 LINE L1 5919 6168 -16 735 246 44 36 chr5 40773662 40773914 -158856236 - L1ME3 LINE L1 -7 6155 5902 1108 217 118 33 chr5 40773949 40774221 -158855929 - AluJo SINE Alu -6 296 2 1833 137 22 4 chr5 40774260 40774531 -158855619 + AluSq SINE Alu 1 276 -37 296 133 0 0 chr5 40774531 40774576 -158855574 + AluSp/q SINE Alu 238 282 -21 434 287 27 40 chr5 40774684 40774834 -158855316 - MIR SINE MIR -75 187 40 1949 157 0 3 chr5 40774873 40775178 -158854972 + AluJb SINE Alu 2 305 -7 1508 238 33 66 chr5 40775722 40776176 -158853974 + MLT1H LTR MaLR 3 441 -108 1825 108 44 30 chr5 40776243 40776538 -158853612 + Tigger2a DNA MER2_type 1 299 -135 321 85 0 0 chr5 40776522 40776569 -158853581 + U7 snRNA snRNA 2 48 -15 * 617 161 125 83 chr5 40776616 40776784 -158853366 + Tigger2a DNA MER2_type 270 444 0 2137 123 0 3 chr5 40777890 40778191 -158851959 - AluSx SINE Alu -12 300 1 303 298 24 0 chr5 40779568 40779652 -158850498 + L2 LINE L2 3227 3312 -1 512 242 222 31 chr5 40779831 40780023 -158850127 - MIR SINE MIR -17 245 7 260 27 27 0 chr5 40780115 40780152 -158849998 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2375 84 0 0 chr5 40780254 40780550 -158849600 + AluY SINE Alu 1 296 -15 2205 98 3 3 chr5 40780678 40780965 -158849185 + AluSp SINE Alu 1 287 -26 284 253 24 12 chr5 40781292 40781375 -158848775 + AluJo SINE Alu 121 204 -98 400 95 0 189 chr5 40781655 40781697 -158848453 + MADE1 DNA Mariner 1 17 -63 1859 57 0 9 chr5 40781697 40781924 -158848226 - AluY SINE Alu -5 306 82 400 95 0 189 chr5 40781924 40781976 -158848174 + MADE1 DNA Mariner 17 77 -3 1505 195 11 3 chr5 40782059 40782371 -158847779 + AluJb SINE Alu 1 312 0 2347 97 3 0 chr5 40782455 40782755 -158847395 + AluSx SINE Alu 1 301 -11 2112 112 41 0 chr5 40783189 40783483 -158846667 - AluSp SINE Alu -7 306 1 1545 183 0 4 chr5 40783490 40783753 -158846397 - AluJb SINE Alu -18 294 33 1975 144 0 10 chr5 40783767 40784066 -158846084 - AluSx SINE Alu -16 296 1 2226 104 7 0 chr5 40784260 40784558 -158845592 + AluSx SINE Alu 1 300 -12 1331 164 19 0 chr5 40784565 40784779 -158845371 + AluJo SINE Alu 84 301 -11 335 288 105 30 chr5 40784808 40785049 -158845101 - L1MC4 LINE L1 -46 7925 7639 1586 166 10 59 chr5 40785049 40785356 -158844794 + AluJb SINE Alu 1 292 -20 335 288 105 30 chr5 40785356 40785488 -158844662 - L1MC4 LINE L1 -332 7639 7518 1290 179 0 0 chr5 40785589 40785790 -158844360 + AluJo SINE Alu 10 210 -102 455 176 69 46 chr5 40785840 40785971 -158844179 - MIR SINE MIR -10 252 119 308 171 11 102 chr5 40787370 40787421 -158842729 - MADE1 DNA Mariner 0 80 39 2233 114 3 0 chr5 40787421 40787719 -158842431 + AluSg SINE Alu 1 299 -11 308 171 11 102 chr5 40787719 40787755 -158842395 - MADE1 DNA Mariner -41 39 1 2538 51 10 0 chr5 40787792 40788086 -158842064 - AluY SINE Alu -14 297 1 304 209 79 40 chr5 40788190 40788283 -158841867 + HsTC2 DNA Tc2 1 1815 -83 22 56 0 0 chr5 40788283 40788319 -158841831 + AT_rich Low_complexity Low_complexity 1 36 0 675 163 17 2 chr5 40788469 40788707 -158841443 + AluJ SINE Alu 2 300 -12 1841 156 0 0 chr5 40788734 40789009 -158841141 + AluJb SINE Alu 8 282 -30 1961 209 20 43 chr5 40789026 40789140 -158841010 + L1M4 LINE L1 4504 4619 -1527 1858 160 17 0 chr5 40789140 40789440 -158840710 - AluSx SINE Alu -7 305 1 1961 209 20 43 chr5 40789440 40789538 -158840612 + L1M4 LINE L1 4619 4718 -1428 1808 154 7 20 chr5 40789538 40789836 -158840314 + AluJb SINE Alu 1 294 -18 1961 209 20 43 chr5 40789836 40790162 -158839988 + L1M4 LINE L1 4718 5031 -1115 1189 164 0 0 chr5 40790188 40790383 -158839767 - L1PA16 LINE L1 -9 6157 5963 1226 106 0 0 chr5 40790748 40790909 -158839241 - AluSg/x SINE Alu -18 292 132 2437 97 0 0 chr5 40790909 40791220 -158838930 - AluY SINE Alu 0 311 1 1638 201 0 41 chr5 40791409 40791727 -158838423 - AluJo SINE Alu -7 305 1 2164 93 0 39 chr5 40792118 40792428 -158837722 - AluSx SINE Alu -14 298 1 2524 80 0 0 chr5 40792442 40792753 -158837397 - AluY SINE Alu 0 311 1 345 298 147 16 chr5 40792880 40792988 -158837162 + L1MC4a LINE L1 7118 7210 -598 2045 147 7 7 chr5 40792988 40793294 -158836856 + AluSx SINE Alu 1 306 -6 345 298 147 16 chr5 40793294 40793437 -158836713 + L1MC4a LINE L1 7210 7402 -406 1874 162 3 10 chr5 40793442 40793750 -158836400 + AluSx SINE Alu 6 311 -1 21 0 0 0 chr5 40793868 40793889 -158836261 + AT_rich Low_complexity Low_complexity 1 21 0 1971 93 100 0 chr5 40793998 40794268 -158835882 + AluSg SINE Alu 1 297 -13 1238 154 128 41 chr5 40794276 40794542 -158835608 + AluJb SINE Alu 5 293 -19 1846 154 0 17 chr5 40794612 40794910 -158835240 + AluJb SINE Alu 10 302 -10 2011 132 0 20 chr5 40795003 40795306 -158834844 + AluSg SINE Alu 2 298 -12 1033 216 14 0 chr5 40795463 40795671 -158834479 + AluJo SINE Alu 87 297 -15 2250 102 3 0 chr5 40795771 40796065 -158834085 + AluSq SINE Alu 5 299 -14 188 268 100 44 chr5 40796123 40796230 -158833920 + MIR SINE MIR 40 145 -63 1904 172 0 0 chr5 40796323 40796625 -158833525 + AluJb SINE Alu 1 302 -10 2427 83 3 3 chr5 40796793 40797095 -158833055 + AluSp SINE Alu 1 302 -11 1878 124 3 60 chr5 40797100 40797235 -158832915 + AluSx SINE Alu 1 142 -171 2171 94 3 7 chr5 40797235 40797521 -158832629 + AluSc SINE Alu 1 285 -24 1878 124 3 60 chr5 40797521 40797715 -158832435 + AluSx SINE Alu 142 313 0 2233 120 0 0 chr5 40798143 40798435 -158831715 - AluSx SINE Alu -19 293 2 1970 134 3 53 chr5 40799901 40800221 -158829929 + AluSx SINE Alu 1 304 -8 2279 90 10 10 chr5 40800830 40801129 -158829021 - AluY SINE Alu -12 299 1 273 75 0 0 chr5 40801239 40801279 -158828871 + (TG)n Simple_repeat Simple_repeat 2 41 0 2046 107 0 44 chr5 40801316 40801451 -158828699 + AluSp SINE Alu 1 140 -174 2139 101 0 7 chr5 40801451 40801728 -158828422 + AluSg SINE Alu 1 275 -35 210 37 0 0 chr5 40801736 40801763 -158828387 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2046 107 0 44 chr5 40801763 40801945 -158828205 + AluSp SINE Alu 147 314 0 625 161 21 118 chr5 40802486 40802694 -158827456 + L1MB3 LINE L1 5643 5829 -354 1718 156 10 10 chr5 40802788 40803076 -158827074 + AluSx SINE Alu 7 294 -18 237 65 0 0 chr5 40803118 40803149 -158827001 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2121 117 0 0 chr5 40803153 40803434 -158826716 - AluY SINE Alu -30 281 1 2402 87 3 3 chr5 40803504 40803804 -158826346 + AluSp SINE Alu 2 301 -12 1869 142 17 10 chr5 40803916 40804211 -158825939 + AluSx SINE Alu 1 297 -15 2146 125 3 3 chr5 40804381 40804686 -158825464 + AluSx SINE Alu 1 305 -7 1719 162 54 10 chr5 40804687 40804983 -158825167 + AluJb SINE Alu 1 309 -3 2285 93 3 0 chr5 40805268 40805557 -158824593 + AluSx SINE Alu 1 290 -22 1491 175 79 10 chr5 40805753 40806044 -158824106 + AluJb SINE Alu 1 311 -1 508 171 0 0 chr5 40806068 40806167 -158823983 - AluSg/x SINE Alu 0 308 210 * 533 123 0 25 chr5 40806160 40806241 -158823909 - AluJb SINE Alu -162 150 72 2171 87 7 3 chr5 40806297 40806583 -158823567 + AluSc SINE Alu 5 291 -18 543 161 125 18 chr5 40806585 40806697 -158823453 + FLAM_C SINE Alu 3 126 -17 48 60 0 0 chr5 40806697 40806780 -158823370 + AT_rich Low_complexity Low_complexity 1 83 0 1026 186 43 103 chr5 40806923 40807430 -158822720 + L1MCc LINE L1 438 985 -4923 1665 147 4 21 chr5 40807430 40807709 -158822441 + AluSx SINE Alu 39 312 0 1026 186 43 103 chr5 40807709 40807744 -158822406 + L1MCc LINE L1 985 1021 -4887 2098 105 3 17 chr5 40807757 40808051 -158822099 + AluSg SINE Alu 1 290 -20 2056 127 28 0 chr5 40808060 40808343 -158821807 + AluSx SINE Alu 1 291 -21 325 119 0 0 chr5 40808354 40808396 -158821754 + Alu SINE Alu 3 44 -258 2132 124 10 0 chr5 40808543 40808842 -158821308 + AluSx SINE Alu 1 302 -10 438 264 123 26 chr5 40808852 40809007 -158821143 + L1MCc LINE L1 1271 1493 -4935 1699 170 109 3 chr5 40809358 40809688 -158820462 + MLT1A1 LTR MaLR 1 365 0 265 315 93 9 chr5 40809700 40809808 -158820342 + L2 LINE L2 3152 3268 -4 2378 78 3 3 chr5 40809848 40810144 -158820006 - AluSp SINE Alu -17 296 1 2202 113 3 7 chr5 40810468 40810770 -158819380 - AluSx SINE Alu -11 301 1 333 241 81 0 chr5 40811196 40811283 -158818867 + MER5A DNA MER1_type 13 106 -83 2359 75 0 0 chr5 40812183 40812492 -158817658 - AluY SINE Alu 0 309 1 1065 98 18 79 chr5 40812507 40812538 -158817612 + L1MA2 LINE L1 6111 6142 -163 1996 118 14 4 chr5 40812538 40812844 -158817306 + AluSg SINE Alu 1 309 0 1065 98 18 79 chr5 40812844 40812986 -158817164 + L1MA2 LINE L1 6142 6291 -14 2204 103 0 19 chr5 40812986 40813296 -158816854 + AluSg SINE Alu 5 308 -2 1065 98 18 79 chr5 40813296 40813309 -158816841 + L1MA2 LINE L1 6291 6275 -30 369 0 0 0 chr5 40813309 40813350 -158816800 + (CA)n Simple_repeat Simple_repeat 2 42 0 1065 98 18 79 chr5 40813350 40813381 -158816769 + L1MA2 LINE L1 6274 6305 0 26 0 0 0 chr5 40813381 40813407 -158816743 + AT_rich Low_complexity Low_complexity 1 26 0 24 53 0 0 chr5 40813871 40813909 -158816241 + AT_rich Low_complexity Low_complexity 1 38 0 1607 113 5 0 chr5 40813996 40814217 -158815933 - AluSg/x SINE Alu -12 298 77 2267 73 38 0 chr5 40814219 40814506 -158815644 - AluY SINE Alu -13 298 1 646 96 0 0 chr5 40814506 40814589 -158815561 - AluSc SINE Alu -225 84 2 1428 173 32 51 chr5 40814596 40814768 -158815382 - AluJb SINE Alu -6 306 132 2030 125 26 13 chr5 40814768 40815071 -158815079 - AluSx SINE Alu -5 307 1 2227 48 4 7 chr5 40815079 40815350 -158814800 - AluY SINE Alu -2 309 40 2165 112 3 0 chr5 40815350 40815637 -158814513 - AluSg SINE Alu -22 288 1 1428 173 32 51 chr5 40815637 40815766 -158814384 - AluJb SINE Alu -185 127 1 1757 148 0 44 chr5 40815766 40816064 -158814086 - AluJb SINE Alu -2 310 26 1895 137 27 3 chr5 40816094 40816387 -158813763 + AluSx SINE Alu 1 300 -12 1726 174 13 3 chr5 40816528 40816832 -158813318 + AluJo SINE Alu 1 307 -5 2205 86 10 13 chr5 40817645 40817947 -158812203 + AluSq SINE Alu 1 301 -12 225 127 28 56 chr5 40818836 40818907 -158811243 + GA-rich Low_complexity Low_complexity 5 73 0 459 231 116 0 chr5 40820084 40820205 -158809945 + MER58B DNA MER1_type 206 340 -1 1170 177 76 48 chr5 40820230 40820378 -158809772 - Charlie1 DNA MER1_type -15 2746 2604 2208 106 3 23 chr5 40820378 40820681 -158809469 + AluSg SINE Alu 1 297 -13 1170 177 76 48 chr5 40820681 40820841 -158809309 - Charlie1 DNA MER1_type -157 2604 2429 488 190 30 32 chr5 40820841 40821018 -158809132 - LTR64 LTR ERVK 0 558 346 497 237 0 0 chr5 40821025 40821118 -158809032 + AluJ/FLAM SINE Alu 3 95 -217 1067 149 48 0 chr5 40821118 40821286 -158808864 + AluJo/FRAM SINE Alu 136 311 -1 1582 189 15 30 chr5 40821286 40821614 -158808536 - LTR64 LTR ERVK -235 323 1 226 211 14 169 chr5 40821614 40821679 -158808471 - Charlie1 DNA MER1_type -341 2420 2382 2285 119 0 0 chr5 40821679 40821990 -158808160 + AluSq SINE Alu 3 313 0 226 211 14 169 chr5 40821990 40822035 -158808115 - Charlie1 DNA MER1_type -379 2382 2332 * 1580 231 59 30 chr5 40822026 40822056 -158808094 - Charlie1 DNA MER1_type -832 1929 1901 2015 124 24 3 chr5 40822056 40822201 -158807949 - AluSq SINE Alu -16 297 156 2273 104 10 10 chr5 40822201 40822510 -158807640 - AluSq SINE Alu -4 309 1 2015 124 24 3 chr5 40822510 40822655 -158807495 - AluSq SINE Alu -157 156 1 1580 231 59 30 chr5 40822655 40822841 -158807309 - Charlie1 DNA MER1_type -860 1901 1722 938 199 0 12 chr5 40822841 40823007 -158807143 + FAM SINE Alu 1 164 -11 1580 231 59 30 chr5 40823007 40823227 -158806923 - Charlie1 DNA MER1_type -1039 1722 1479 513 234 29 58 chr5 40823363 40823500 -158806650 + MER54A LTR ERVL 484 616 -285 1175 86 103 0 chr5 40823503 40823678 -158806472 - MER30 DNA MER1_type -35 195 3 1743 194 7 0 chr5 40823678 40823972 -158806178 + MER54A LTR ERVL 599 894 -7 2185 105 3 10 chr5 40823973 40824279 -158805871 + AluSp SINE Alu 1 304 -9 1565 118 3 84 chr5 40824318 40824605 -158805545 + MER75 DNA T2_type 1 264 -250 1991 138 3 3 chr5 40824844 40824980 -158805170 + AluSx SINE Alu 1 136 -176 2290 92 14 0 chr5 40824980 40825274 -158804876 + AluSx SINE Alu 1 298 -14 1991 138 3 3 chr5 40825274 40825428 -158804722 + AluSx SINE Alu 135 291 -21 1480 124 22 137 chr5 40825533 40825855 -158804295 + AluYb8 SINE Alu 1 285 -33 216 0 0 0 chr5 40825855 40825879 -158804271 + (CAA)n Simple_repeat Simple_repeat 1 24 0 2292 94 7 10 chr5 40825882 40826190 -158803960 + AluSx SINE Alu 1 307 -5 2232 77 14 3 chr5 40826201 40826488 -158803662 + AluSx SINE Alu 20 309 -3 1107 92 104 0 chr5 40826499 40826663 -158803487 + AluSg/x SINE Alu 121 301 -11 264 246 23 154 chr5 40827330 40827635 -158802515 - L1ME LINE L1 -379 5742 5478 2386 67 0 13 chr5 40827898 40828198 -158801952 - AluY SINE Alu -15 296 1 1720 174 24 3 chr5 40828198 40828496 -158801654 - AluJb SINE Alu -6 306 3 675 186 335 13 chr5 40828631 40828867 -158801283 - MLT1E2 LTR MaLR -228 398 87 1968 145 3 0 chr5 40829328 40829632 -158800518 + AluSq SINE Alu 1 305 -8 2273 105 0 3 chr5 40829658 40829954 -158800196 - AluSg SINE Alu -15 295 1 233 0 62 0 chr5 40829954 40829986 -158800164 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2057 120 22 0 chr5 40829986 40830260 -158799890 - AluSc SINE Alu -29 280 1 2021 134 0 0 chr5 40830287 40830599 -158799551 + AluSq SINE Alu 1 312 0 301 86 35 0 chr5 40830624 40830682 -158799468 + A-rich Low_complexity Low_complexity 1 60 0 2222 101 0 7 chr5 40830822 40831118 -158799032 - AluSx SINE Alu -18 294 1 2250 82 0 14 chr5 40831147 40831438 -158798712 - AluY SINE Alu -23 288 2 531 238 165 29 chr5 40831459 40831665 -158798485 - L1MC5 LINE L1 -51 7910 7677 1602 178 0 45 chr5 40831730 40831943 -158798207 - AluJb SINE Alu -5 307 111 2543 50 27 3 chr5 40831943 40832244 -158797906 + AluY SINE Alu 1 308 -3 1602 178 0 45 chr5 40832244 40832339 -158797811 - AluJb SINE Alu -201 111 13 2353 198 166 64 chr5 40832346 40832794 -158797356 - MER21B LTR ERV1 -60 803 253 1928 150 16 13 chr5 40832794 40833100 -158797050 + AluJo SINE Alu 1 307 -5 2353 198 166 64 chr5 40833100 40833367 -158796783 - MER21B LTR ERV1 -610 253 15 2239 81 0 34 chr5 40833372 40833669 -158796481 - AluY SINE Alu -24 287 1 1626 126 4 4 chr5 40833920 40834150 -158796000 - AluSx SINE Alu -48 264 35 21 0 0 0 chr5 40834154 40834175 -158795975 + AT_rich Low_complexity Low_complexity 1 21 0 269 91 0 0 chr5 40834175 40834219 -158795931 - L1MA3 LINE L1 0 6305 6262 2223 114 0 3 chr5 40834372 40834670 -158795480 + AluSq SINE Alu 1 297 -16 22 0 0 0 chr5 40834878 40834900 -158795250 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 40834957 40834986 -158795164 + AT_rich Low_complexity Low_complexity 1 29 0 323 200 114 0 chr5 40835270 40835340 -158794810 + MER21B LTR ERV1 497 574 -289 2258 95 10 3 chr5 40835676 40835972 -158794178 - AluSg SINE Alu -12 298 1 2100 134 3 7 chr5 40836012 40836319 -158793831 + AluSx SINE Alu 1 306 -6 707 133 125 17 chr5 40836347 40836467 -158793683 + FLAM_C SINE Alu 6 138 -5 1996 130 7 10 chr5 40836643 40836950 -158793200 - AluSx SINE Alu -6 306 1 2329 81 0 7 chr5 40836959 40837267 -158792883 - AluY SINE Alu -4 307 2 22 0 0 0 chr5 40837741 40837763 -158792387 + AT_rich Low_complexity Low_complexity 1 22 0 518 84 0 0 chr5 40837815 40837886 -158792264 - MER41B LTR ERV1 -84 551 481 2349 77 0 3 chr5 40837897 40838194 -158791956 - AluY SINE Alu -13 298 3 2354 94 3 0 chr5 40838274 40838572 -158791578 - AluSp SINE Alu -14 299 1 25 51 0 0 chr5 40838808 40838847 -158791303 + AT_rich Low_complexity Low_complexity 1 39 0 2928 166 28 18 chr5 40838872 40839415 -158790735 - L1MB3 LINE L1 -77 6106 5559 2145 103 7 7 chr5 40839734 40840026 -158790124 - AluSx SINE Alu -6 306 15 1132 144 23 0 chr5 40840027 40840200 -158789950 - AluSg SINE Alu -133 177 1 2149 97 3 10 chr5 40840212 40840500 -158789650 - AluSg SINE Alu -23 287 2 1316 220 56 16 chr5 40840547 40840591 -158789559 - L1 LINE L1 -2919 3227 3186 2214 112 3 0 chr5 40840591 40840895 -158789255 - AluSg SINE Alu -4 306 2 1316 220 56 16 chr5 40840895 40841239 -158788911 - L1 LINE L1 -2960 3186 2818 1814 171 0 10 chr5 40841239 40841538 -158788612 - AluJb SINE Alu -16 296 1 1316 220 56 16 chr5 40841538 40841580 -158788570 - L1 LINE L1 -3328 2818 2779 1892 117 68 0 chr5 40841581 40841862 -158788288 + AluSg SINE Alu 1 300 -10 796 310 85 48 chr5 40841948 40842383 -158787767 - L2 LINE L2 -1 3312 2862 327 274 39 49 chr5 40842540 40842642 -158787508 - L2 LINE L2 -22 3291 3191 1354 87 71 0 chr5 40842874 40843058 -158787092 - MER107 DNA MER1_type 0 197 1 36 0 0 0 chr5 40843332 40843368 -158786782 + AT_rich Low_complexity Low_complexity 1 36 0 1659 191 14 0 chr5 40843373 40843655 -158786495 - AluJo SINE Alu -26 286 1 23 0 0 0 chr5 40843801 40843824 -158786326 + AT_rich Low_complexity Low_complexity 1 23 0 330 115 0 0 chr5 40844076 40844128 -158786022 + (GAA)n Simple_repeat Simple_repeat 1 52 0 1055 136 12 6 chr5 40844240 40844402 -158785748 + AluSc SINE Alu 135 297 -12 1651 155 32 7 chr5 40844418 40844696 -158785454 + AluJo SINE Alu 1 285 -27 1187 110 6 6 chr5 40844879 40845043 -158785107 + AluSp SINE Alu 137 300 -13 2242 81 20 14 chr5 40845269 40845564 -158784586 + AluSc SINE Alu 1 297 -12 2379 67 10 3 chr5 40845644 40845941 -158784209 - AluY SINE Alu -12 299 1 344 244 11 22 chr5 40845942 40846032 -158784118 - MER97a DNA MER1_type? -24 870 782 1621 133 92 19 chr5 40846416 40846553 -158783597 + AluSx SINE Alu 1 126 -186 2445 70 0 0 chr5 40846553 40846852 -158783298 + AluY SINE Alu 1 299 -12 1621 133 92 19 chr5 40846852 40846985 -158783165 + AluSx SINE Alu 126 291 -21 1679 197 114 49 chr5 40847211 40847470 -158782680 - MER97a DNA MER1_type? -324 570 329 2170 105 0 3 chr5 40847470 40847790 -158782360 - AluSx SINE Alu 0 319 1 1679 197 114 49 chr5 40847790 40848022 -158782128 - MER97a DNA MER1_type? -565 329 46 786 236 28 11 chr5 40848123 40848301 -158781849 + MLT1B LTR MaLR 210 390 0 1725 151 16 40 chr5 40848560 40848864 -158781286 - AluJo SINE Alu -15 297 1 2399 86 0 7 chr5 40848873 40849174 -158780976 - AluSx SINE Alu -13 299 1 711 200 31 8 chr5 40849183 40849313 -158780837 - AluJo SINE Alu -178 134 2 3530 166 50 15 chr5 40849351 40849850 -158780300 - L1MA5 LINE L1 -2 6298 5767 315 0 0 0 chr5 40849850 40849885 -158780265 + (TG)n Simple_repeat Simple_repeat 2 36 0 3530 166 50 15 chr5 40849885 40850058 -158780092 - L1MA5 LINE L1 -533 5767 5602 1762 192 41 28 chr5 40850065 40850455 -158779695 - L1MA4 LINE L1 -11 6289 5895 279 133 0 0 chr5 40850455 40850500 -158779650 + (TTCC)n Simple_repeat Simple_repeat 1 45 0 2110 129 0 3 chr5 40850501 40850804 -158779346 - AluSx SINE Alu -10 302 1 197 371 26 17 chr5 40850902 40851018 -158779132 + L2 LINE L2 2601 2717 -597 1446 181 16 80 chr5 40851283 40851597 -158778553 - AluJo SINE Alu -18 294 1 236 259 42 121 chr5 40851602 40851768 -158778382 - MER5B DNA MER1_type -1 177 25 27 29 0 0 chr5 40852254 40852288 -158777862 + AT_rich Low_complexity Low_complexity 1 34 0 462 259 30 15 chr5 40852343 40852474 -158777676 + L1ME4a LINE L1 5588 5720 -401 332 321 43 14 chr5 40852641 40852781 -158777369 + L1ME4a LINE L1 5711 5854 -267 1181 141 0 0 chr5 40852893 40853070 -158777080 - AluSp SINE Alu 0 313 137 1735 189 14 3 chr5 40853320 40853611 -158776539 + AluJb SINE Alu 1 294 -18 467 260 100 35 chr5 40853735 40853935 -158776215 + L2 LINE L2 2440 2652 -662 765 230 113 25 chr5 40853991 40854230 -158775920 + MIR SINE MIR 2 261 -1 541 106 35 47 chr5 40854634 40854719 -158775431 + FRAM SINE Alu 67 150 -26 1629 160 20 33 chr5 40854793 40855093 -158775057 + AluSx SINE Alu 1 296 -16 800 156 0 8 chr5 40855252 40855374 -158774776 - FLAM_C SINE Alu -11 132 12 707 273 64 26 chr5 40855478 40855742 -158774408 - MLT1J LTR MaLR 0 511 238 2077 122 0 20 chr5 40855746 40856049 -158774101 + AluSx SINE Alu 1 297 -15 2371 87 3 0 chr5 40856496 40856795 -158773355 - AluSq SINE Alu -13 300 1 2210 103 0 3 chr5 40857062 40857362 -158772788 - AluSq SINE Alu -14 299 1 1192 171 108 87 chr5 40857608 40857895 -158772255 - AluJo SINE Alu -9 293 1 713 220 7 7 chr5 40858676 40858817 -158771333 - FLAM_C SINE Alu -2 141 1 601 243 26 7 chr5 40858818 40858970 -158771180 - L1ME2 LINE L1 -10 6154 6000 2007 142 0 14 chr5 40859000 40859295 -158770855 + AluSx SINE Alu 1 291 -21 36 62 0 0 chr5 40859458 40859522 -158770628 + AT_rich Low_complexity Low_complexity 1 64 0 2219 96 0 3 chr5 40859661 40859970 -158770180 + AluSx SINE Alu 1 308 0 2265 101 0 3 chr5 40860997 40861294 -158768856 + AluSc SINE Alu 1 296 -13 2366 95 7 0 chr5 40861421 40861725 -158768425 + AluSp SINE Alu 2 307 -6 1127 282 126 18 chr5 40861726 40862253 -158767897 + L2 LINE L2 2707 3312 -1 6388 57 32 50 chr5 40862338 40864123 -158766027 - SVA Other Other -589 1386 1 1950 139 24 0 chr5 40864138 40864432 -158765718 - AluSx SINE Alu -11 301 1 209 224 82 0 chr5 40864596 40864645 -158765505 - L2 LINE L2 -5 3267 3215 1990 158 0 3 chr5 40864778 40865082 -158765068 - AluJb SINE Alu -9 303 1 1786 159 0 33 chr5 40865098 40865400 -158764750 - AluJo SINE Alu -16 296 5 207 0 0 0 chr5 40865764 40865787 -158764363 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 25 31 0 0 chr5 40865809 40865841 -158764309 + AT_rich Low_complexity Low_complexity 1 32 0 1811 46 14 5 chr5 40865888 40866104 -158764046 - AluY SINE Alu -23 288 71 1993 138 6 16 chr5 40866310 40866621 -158763529 - AluSx SINE Alu -4 308 1 2155 115 3 0 chr5 40866766 40867061 -158763089 - AluSg SINE Alu -14 296 1 1944 132 24 3 chr5 40867089 40867376 -158762774 + AluSx SINE Alu 1 293 -19 817 168 0 0 chr5 40867470 40867595 -158762555 - FLAM_C SINE Alu -8 125 1 795 171 29 14 chr5 40867638 40867778 -158762372 + FLAM_C SINE Alu 2 143 0 1252 213 37 0 chr5 40867988 40868232 -158761918 - AluJo SINE Alu -4 308 56 1766 112 50 8 chr5 40868233 40868492 -158761658 + AluSg SINE Alu 35 304 -6 732 284 49 16 chr5 40868534 40868777 -158761373 - MIR SINE MIR -9 253 3 1813 148 3 56 chr5 40869839 40870015 -158760135 - AluJb SINE Alu -5 307 154 2155 118 0 31 chr5 40870015 40870337 -158759813 - AluSx SINE Alu 0 312 1 1813 148 3 56 chr5 40870337 40870484 -158759666 - AluJb SINE Alu -158 154 1 259 356 8 25 chr5 40870732 40870850 -158759300 - MIR SINE MIR -55 153 38 263 271 0 0 chr5 40870903 40870973 -158759177 + A-rich Low_complexity Low_complexity 1 70 0 2089 123 7 7 chr5 40871109 40871418 -158758732 - AluSg SINE Alu -1 309 1 2322 100 0 0 chr5 40871432 40871733 -158758417 + AluSx SINE Alu 10 310 -2 23 33 0 0 chr5 40871736 40871766 -158758384 + AT_rich Low_complexity Low_complexity 1 30 0 1840 170 3 22 chr5 40871954 40872265 -158757885 - AluJo SINE Alu -7 305 1 1426 259 201 42 chr5 40872378 40872518 -158757632 - L2 LINE L2 -10 3303 3187 1816 167 0 22 chr5 40872518 40872830 -158757320 + AluJb SINE Alu 1 305 -7 1426 259 201 42 chr5 40872830 40873822 -158756328 - L2 LINE L2 -126 3187 1939 415 284 90 7 chr5 40873935 40874233 -158755917 - MLT1H LTR MaLR 0 549 214 1500 181 79 0 chr5 40874349 40874626 -158755524 - AluJb SINE Alu -13 299 1 2493 71 0 0 chr5 40874664 40874973 -158755177 + AluY SINE Alu 1 309 -2 240 259 94 0 chr5 40874977 40875062 -158755088 - L1MCa LINE L1 -4339 2087 1995 1902 97 62 38 chr5 40875150 40875438 -158754712 + AluSq SINE Alu 1 295 -18 532 307 26 0 chr5 40875440 40875593 -158754557 + MLT1J LTR MaLR 106 262 -249 2970 220 72 43 chr5 40875824 40876568 -158753582 - L1ME1 LINE L1 -4 6162 5441 565 246 8 8 chr5 40876568 40876690 -158753460 - FLAM_A SINE Alu -11 122 1 2970 220 72 43 chr5 40876690 40877668 -158752482 - L1ME1 LINE L1 -725 5441 4381 2339 104 3 0 chr5 40878106 40878415 -158751735 - AluSx SINE Alu -1 311 2 1766 150 0 0 chr5 40878443 40878710 -158751440 - AluSx SINE Alu -45 267 1 264 297 158 0 chr5 40878734 40878835 -158751315 + L2 LINE L2 3189 3305 -8 4984 155 17 11 chr5 40879107 40879947 -158750203 - L1MB2 LINE L1 -4 6167 5323 2298 69 0 33 chr5 40879947 40880252 -158749898 - AluSc SINE Alu -14 295 1 975 93 6 80 chr5 40880257 40880419 -158749731 - AluY SINE Alu -161 150 1 517 224 17 58 chr5 40880420 40880594 -158749556 - L1MB2 LINE L1 -816 5330 5164 2006 149 17 0 chr5 40880622 40880917 -158749233 - AluSx SINE Alu -12 300 1 437 200 19 48 chr5 40881042 40881147 -158749003 + MER2 DNA MER2_type 22 123 -222 1869 145 73 28 chr5 40881543 40881901 -158748249 - THE1C LTR MaLR -1 374 1 297 328 17 34 chr5 40883615 40883734 -158746416 - L2 LINE L2 -188 3084 2968 386 248 172 35 chr5 40883790 40883988 -158746162 - MIR SINE MIR -1 261 37 336 269 13 0 chr5 40884120 40884198 -158745952 - L2 LINE L2 -1 3271 3193 299 209 0 15 chr5 40886195 40886262 -158743888 + L1MEc LINE L1 821 886 -5510 817 155 89 78 chr5 40886262 40886467 -158743683 + Charlie1 DNA MER1_type 2488 2689 -72 184 42 0 0 chr5 40886467 40886491 -158743659 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2236 85 0 3 chr5 40886491 40886774 -158743376 - AluY SINE Alu -1 305 1 817 155 89 78 chr5 40886774 40886838 -158743312 + Charlie1 DNA MER1_type 2688 2761 0 354 280 112 24 chr5 40937048 40937276 -158692874 - MSTA LTR MaLR -180 248 1 1293 189 14 104 chr5 40937359 40937514 -158692636 - L1 LINE L1 -2391 3755 3588 2886 110 2 22 chr5 40937514 40937931 -158692219 - L1PA12 LINE L1 0 6168 5760 1293 189 14 104 chr5 40937931 40938240 -158691910 - L1 LINE L1 -2558 3588 3300 734 242 21 52 chr5 40938284 40938611 -158691539 - L1M4 LINE L1 -1083 5063 4747 5529 170 92 19 chr5 40941320 40941408 -158688742 + L1PB3 LINE L1 3752 3832 -2322 2099 180 70 5 chr5 40941408 40941808 -158688342 + MSTA LTR MaLR 1 426 -2 5529 170 92 19 chr5 40941808 40942810 -158687340 + L1PB3 LINE L1 3832 4760 -1394 1202 129 144 0 chr5 40942810 40943011 -158687139 - MER30 DNA MER1_type 0 230 1 5529 170 92 19 chr5 40943011 40943375 -158686775 + L1PB3 LINE L1 4760 5096 -1058 2371 81 0 40 chr5 40943375 40943697 -158686453 + AluSq SINE Alu 1 309 -4 5529 170 92 19 chr5 40943697 40944458 -158685692 + L1PB3 LINE L1 5096 6147 -7 269 212 121 20 chr5 40944474 40944573 -158685577 + L1MC/D LINE L1 5106 5214 -932 1220 150 68 5 chr5 40944573 40944780 -158685370 + AluJb SINE Alu 13 232 -80 378 0 0 0 chr5 40944784 40944826 -158685324 + (GA)n Simple_repeat Simple_repeat 1 42 0 24 0 0 0 chr5 40944867 40944891 -158685259 + AT_rich Low_complexity Low_complexity 1 24 0 1782 172 28 23 chr5 40944945 40945000 -158685150 + L1MC/D LINE L1 5328 5381 -2404 2231 121 0 0 chr5 40945000 40945298 -158684852 + AluSx SINE Alu 1 298 -14 1782 172 28 23 chr5 40945298 40945632 -158684518 + L1MC/D LINE L1 5381 5719 -2066 1562 285 76 16 chr5 40945653 40946207 -158683943 - L2 LINE L2 -804 2510 1924 2056 160 0 0 chr5 40946292 40946604 -158683546 + AluSx SINE Alu 1 312 0 24 0 0 0 chr5 40946721 40946745 -158683405 + AT_rich Low_complexity Low_complexity 1 24 0 588 103 22 71 chr5 40946863 40947047 -158683103 + (GGGAA)n Simple_repeat Simple_repeat 2 176 0 215 244 39 26 chr5 40947049 40947127 -158683023 + GA-rich Low_complexity Low_complexity 2 80 0 2519 251 106 43 chr5 40947743 40947869 -158682281 - L1M4 LINE L1 -1419 4727 4610 1704 180 29 3 chr5 40947869 40948213 -158681937 - L1MA4A LINE L1 -7 6296 5944 2519 251 106 43 chr5 40948213 40948769 -158681381 - L1M4 LINE L1 -1536 4610 4090 1429 169 130 32 chr5 40948769 40949107 -158681043 + MLT1A2 LTR MaLR 4 374 0 2519 251 106 43 chr5 40949107 40949802 -158680348 - L1M4 LINE L1 -2056 4090 3217 673 198 209 4 chr5 40949816 40950079 -158680071 - L1M4 LINE L1 -3050 3096 2780 481 177 0 0 chr5 40950089 40950168 -158679982 - AluJ/FLAM SINE Alu -233 79 1 352 218 45 18 chr5 40950174 40950284 -158679866 - L1M4 LINE L1 -3357 2789 2677 186 342 40 53 chr5 40950284 40950436 -158679714 + L2 LINE L2 2552 2701 -613 1000 193 5 25 chr5 40950505 40950702 -158679448 + AluJo SINE Alu 85 277 -35 254 248 26 43 chr5 40950751 40950868 -158679282 - L1MC4 LINE L1 -2 8040 7926 214 184 0 0 chr5 40950952 40950990 -158679160 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 4451 235 88 16 chr5 40950990 40951111 -158679039 - L1MC4 LINE L1 -128 7914 7803 736 188 0 8 chr5 40951111 40951239 -158678911 - FLAM_A SINE Alu -5 128 2 4451 235 88 16 chr5 40951239 40952579 -158677571 - L1MC4 LINE L1 -239 7803 6348 826 255 89 64 chr5 40952591 40952870 -158677280 - MLT1C LTR MaLR 0 467 196 1928 151 14 0 chr5 40952870 40953161 -158676989 - AluJb SINE Alu -17 295 1 826 255 89 64 chr5 40953161 40953226 -158676924 - MLT1C LTR MaLR -271 196 134 1854 163 0 10 chr5 40953226 40953527 -158676623 - AluJb SINE Alu -14 298 1 826 255 89 64 chr5 40953527 40953632 -158676518 - MLT1C LTR MaLR -333 134 6 409 221 107 0 chr5 40953676 40953807 -158676343 - L1MC4a LINE L1 -1541 6267 6123 427 358 40 5 chr5 40953894 40954165 -158675985 - L2 LINE L2 -244 3069 2791 3345 62 25 0 chr5 40954165 40954598 -158675552 - MLT2A1 LTR ERVL 0 444 1 1386 235 3 20 chr5 40954663 40954957 -158675193 - AluJo SINE Alu -18 294 6 237 159 0 0 chr5 40954979 40955023 -158675127 + (TA)n Simple_repeat Simple_repeat 1 44 0 1908 107 17 14 chr5 40955023 40955314 -158674836 - L1PA11 LINE L1 -2 6172 5881 514 279 96 122 chr5 40955317 40955381 -158674769 - L2 LINE L2 -605 2709 2645 2159 122 3 3 chr5 40955381 40955684 -158674466 + AluJb SINE Alu 5 307 -5 514 279 96 122 chr5 40955684 40956078 -158674072 - L2 LINE L2 -669 2645 2263 183 273 15 76 chr5 40956897 40956963 -158673187 - L2 LINE L2 -21 3251 3190 182 36 0 36 chr5 40957348 40957368 -158672782 + (TA)n Simple_repeat Simple_repeat 2 22 -6 2200 118 3 3 chr5 40957368 40957664 -158672486 - AluSx SINE Alu -16 296 1 182 36 0 36 chr5 40957664 40957671 -158672479 + (TA)n Simple_repeat Simple_repeat 22 28 0 2304 111 3 0 chr5 40958012 40958309 -158671841 - AluSq SINE Alu -15 298 1 973 95 82 0 chr5 40958323 40958481 -158671669 - L1MA2 LINE L1 0 6304 6134 246 70 70 0 chr5 40958486 40958543 -158671607 + (TTATA)n Simple_repeat Simple_repeat 2 62 0 2066 158 0 0 chr5 40958546 40958857 -158671293 - AluSq SINE Alu -2 311 1 2714 133 9 4 chr5 40958857 40959323 -158670827 - L1MA1 LINE L1 -156 6146 5679 6011 98 37 29 chr5 40959324 40960263 -158669887 - SVA Other Other 0 1386 440 437 242 39 55 chr5 40960478 40960606 -158669544 + MIR3 SINE MIR 68 193 -15 2510 97 27 16 chr5 40960879 40961250 -158668900 + THE1C LTR MaLR 1 375 0 3592 185 102 13 chr5 40961276 40962179 -158667971 + L1MC4a LINE L1 6824 7806 -2 1944 104 63 0 chr5 40962187 40962507 -158667643 + AluSx SINE Alu 1 337 0 389 306 122 36 chr5 40962917 40963113 -158667037 + LTR67 LTR ERVL 109 321 -236 495 245 179 66 chr5 40963444 40963656 -158666494 + MIR SINE MIR 2 237 -25 234 0 0 0 chr5 40964647 40964673 -158665477 + (TTG)n Simple_repeat Simple_repeat 2 27 0 829 293 70 4 chr5 40964973 40965215 -158664935 - MIR SINE MIR 0 262 5 22 0 0 0 chr5 40965271 40965293 -158664857 + AT_rich Low_complexity Low_complexity 1 22 0 1621 145 40 25 chr5 40966257 40966533 -158663617 - AluSx SINE Alu -32 280 1 2303 118 0 0 chr5 40966540 40966844 -158663306 - AluSx SINE Alu -8 304 1 1066 97 13 0 chr5 40967530 40967685 -158662465 - L1MA3 LINE L1 0 7724 7568 14622 152 28 18 chr5 40967691 40972992 -158657158 - L1MA3 LINE L1 -717 7007 1652 835 159 111 53 chr5 40972992 40973199 -158656951 - THE1B LTR MaLR -145 219 1 200 220 68 51 chr5 40973387 40973446 -158656704 + L2 LINE L2 3199 3258 -55 205 253 33 113 chr5 40974677 40974827 -158655323 + MIR SINE MIR 84 221 -41 29890 98 9 29 chr5 40975288 40981777 -158648373 - L1PA7 LINE L1 -2 6467 1 197 352 125 16 chr5 40982071 40982199 -158647951 + L2 LINE L2 2799 2940 -374 1469 186 89 24 chr5 40982200 40982340 -158647810 - Tigger2a DNA MER2_type -2314 394 265 229 48 71 0 chr5 40982340 40982382 -158647768 + (TAAAG)n Simple_repeat Simple_repeat 3 47 0 1469 186 89 24 chr5 40982382 40982611 -158647539 - Tigger2a DNA MER2_type -2443 265 1 437 325 26 21 chr5 40982742 40982933 -158647217 + L2 LINE L2 2891 3082 -190 1943 216 79 65 chr5 40983716 40983887 -158646263 - L1M4 LINE L1 -2970 3176 3009 1497 181 53 58 chr5 40983887 40984263 -158645887 - MLT1A2 LTR MaLR 0 374 1 1943 216 79 65 chr5 40984263 40985086 -158645064 - L1M4 LINE L1 -3137 3009 2168 365 237 114 23 chr5 40985109 40985120 -158645030 - MER3 DNA MER1_type -30 179 170 1294 196 92 6 chr5 40985120 40985437 -158644713 - MER2 DNA MER2_type 0 344 1 365 237 114 23 chr5 40985437 40985556 -158644594 - MER3 DNA MER1_type -39 170 37 2652 160 41 105 chr5 40985784 40986490 -158643660 - LTR8 LTR ERV1 -30 661 1 246 203 101 0 chr5 40986916 40986985 -158643165 - Charlie8 DNA MER1_type -2217 200 125 282 311 87 0 chr5 40987261 40987364 -158642786 + L2 LINE L2 3190 3301 -12 412 356 40 28 chr5 40988439 40988692 -158641458 + L2 LINE L2 2600 2855 -459 358 257 83 42 chr5 40988987 40989131 -158641019 + L2 LINE L2 3123 3272 0 951 274 24 8 chr5 40991074 40991329 -158638821 + MIR SINE MIR 4 262 0 278 251 52 11 chr5 40991583 40991690 -158638460 + MIR SINE MIR 94 203 -59 958 206 5 15 chr5 40991894 40992093 -158638057 + MER58A DNA MER1_type 24 220 -4 234 0 0 0 chr5 40992166 40992192 -158637958 + (A)n Simple_repeat Simple_repeat 1 26 0 276 170 134 98 chr5 40992194 40992306 -158637844 + MER103 DNA DNA 2 117 -49 237 83 0 0 chr5 40992379 40992415 -158637735 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 189 286 36 0 chr5 40993352 40993408 -158636742 + L2 LINE L2 3211 3268 -4 200 206 0 0 chr5 40993654 40993688 -158636462 + polypurine Low_complexity Low_complexity 3 36 0 23 33 0 0 chr5 40993705 40993735 -158636415 + AT_rich Low_complexity Low_complexity 1 30 0 659 146 0 9 chr5 40993737 40993847 -158636303 - FRAM SINE Alu -16 160 52 631 229 29 0 chr5 40993916 40994091 -158636059 - LTR16B LTR ERVL 0 464 285 2021 186 16 21 chr5 40994091 40994516 -158635634 + L1MB8 LINE L1 5744 6166 -12 432 83 56 0 chr5 40994720 40994792 -158635358 - SVA Other Other -877 509 434 1279 124 0 0 chr5 40994793 40994987 -158635163 - L1M1 LINE L1 -612 5692 5499 25 31 0 0 chr5 40995448 40995480 -158634670 + AT_rich Low_complexity Low_complexity 1 32 0 538 365 52 7 chr5 40995616 40995926 -158634224 + L1M4 LINE L1 3762 4085 -2061 22 35 0 0 chr5 40996365 40996394 -158633756 + AT_rich Low_complexity Low_complexity 1 29 0 4760 107 30 16 chr5 40996398 40996757 -158633393 - L1PB1 LINE L1 -1 6866 6513 354 23 0 0 chr5 40996757 40996800 -158633350 + (CA)n Simple_repeat Simple_repeat 2 44 0 4760 107 30 16 chr5 40996800 40997242 -158632908 - L1PB1 LINE L1 -354 6513 6054 2196 132 3 0 chr5 40997244 40997548 -158632602 + AluY SINE Alu 1 305 -6 39697 62 3 1 chr5 40997558 41003692 -158626458 + L1PA5 LINE L1 11 6150 -4 12009 163 57 40 chr5 41003692 41008368 -158621782 - L1PB1 LINE L1 -804 6058 1464 757 149 33 0 chr5 41008368 41008489 -158621661 + AluSq/x SINE Alu 1 125 -188 12009 163 57 40 chr5 41008489 41008512 -158621638 - L1PB1 LINE L1 -5398 1464 1443 405 0 0 0 chr5 41008512 41008557 -158621593 + (CCA)n Simple_repeat Simple_repeat 3 47 0 12009 163 57 40 chr5 41008557 41009021 -158621129 - L1PB1 LINE L1 -5419 1443 625 505 198 9 0 chr5 41009013 41009124 -158621026 - L1PB1 LINE L1 -6663 200 89 * 545 131 0 0 chr5 41009119 41009203 -158620947 + L1PBa LINE L1 1391 1474 -5389 496 134 0 0 chr5 41009230 41009312 -158620838 - L1PB1 LINE L1 -6779 84 3 2013 93 68 4 chr5 41009554 41009833 -158620317 - AluSx SINE Alu -15 297 1 510 291 80 99 chr5 41010082 41010494 -158619656 - L2 LINE L2 -91 3222 2819 33 0 0 0 chr5 41010588 41010621 -158619529 + AT_rich Low_complexity Low_complexity 1 33 0 366 241 99 94 chr5 41010737 41010949 -158619201 - MIR SINE MIR -1 261 49 399 303 92 22 chr5 41011432 41011459 -158618691 - L1M4 LINE L1 -2146 4000 3976 863 164 184 10 chr5 41011459 41011660 -158618490 - MER46A DNA MER2_type 0 236 1 399 303 92 22 chr5 41011660 41011817 -158618333 - L1M4 LINE L1 -2170 3976 3803 236 247 82 0 chr5 41011934 41012019 -158618131 - L1M4 LINE L1 -2458 3688 3597 1520 147 67 35 chr5 41014357 41014669 -158615481 + MLT1B LTR MaLR 65 386 -4 2313 96 0 3 chr5 41015439 41015740 -158614410 - AluSc SINE Alu -9 300 1 21 82 0 0 chr5 41015940 41015989 -158614161 + AT_rich Low_complexity Low_complexity 1 49 0 2212 101 0 19 chr5 41017368 41017684 -158612466 - AluSg SINE Alu 0 310 1 1276 258 109 34 chr5 41017928 41018431 -158611719 + MLT1H LTR MaLR 9 549 0 2080 117 0 13 chr5 41018877 41019175 -158610975 - AluSx SINE Alu -18 294 1 24 0 0 0 chr5 41019581 41019605 -158610545 + AT_rich Low_complexity Low_complexity 1 24 0 202 319 231 0 chr5 41019657 41019839 -158610311 + MIR SINE MIR 4 227 -35 23 33 0 0 chr5 41020518 41020548 -158609602 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr5 41020600 41020625 -158609525 + AT_rich Low_complexity Low_complexity 1 25 0 2053 113 40 7 chr5 41020626 41020926 -158609224 - AluSx SINE Alu -2 310 1 2208 105 7 0 chr5 41021740 41022034 -158608116 + AluSx SINE Alu 1 296 -16 7959 136 9 13 chr5 41022600 41024961 -158605189 - L1MA2 LINE L1 0 7723 5368 1724 190 3 10 chr5 41024961 41025266 -158604884 - AluSx SINE Alu -7 305 3 7959 136 9 13 chr5 41025266 41025362 -158604788 - L1MA2 LINE L1 -2355 5368 5273 1202 244 0 0 chr5 41025361 41025644 -158604506 - L1MA2 LINE L1 -3282 4283 4001 * 2469 135 39 36 chr5 41025648 41026126 -158604024 - L1MA2 LINE L1 -3806 3759 3284 2046 98 3 52 chr5 41026126 41026451 -158603699 + AluSp SINE Alu 1 309 -4 2469 135 39 36 chr5 41026451 41026555 -158603595 - L1MA2 LINE L1 -4281 3284 3171 2178 119 3 3 chr5 41026555 41026850 -158603300 + AluSg SINE Alu 1 295 -15 2469 135 39 36 chr5 41026850 41026876 -158603274 - L1MA2 LINE L1 -4394 3171 3147 2315 102 3 0 chr5 41026876 41027179 -158602971 - AluSx SINE Alu -8 304 1 256 299 112 0 chr5 41027213 41027320 -158602830 + MIR SINE MIR 131 249 -13 270 322 44 0 chr5 41027424 41027514 -158602636 + MIR3 SINE MIR 67 160 -48 256 263 75 12 chr5 41028348 41028428 -158601722 - MIR SINE MIR -88 120 36 334 241 161 0 chr5 41028571 41028683 -158601467 - MER112 DNA MER1_type -66 194 65 961 229 126 0 chr5 41028837 41029068 -158601082 + MIR SINE MIR 3 262 0 203 340 57 28 chr5 41029521 41029627 -158600523 - L2 LINE L2 -209 3063 2955 411 137 0 0 chr5 41029743 41029816 -158600334 + (CA)n Simple_repeat Simple_repeat 2 74 0 943 195 6 0 chr5 41029816 41029975 -158600175 - FAM SINE Alu -11 164 5 2120 127 0 0 chr5 41030816 41031128 -158599022 - AluSx SINE Alu 0 312 1 21 36 0 0 chr5 41032329 41032357 -158597793 + AT_rich Low_complexity Low_complexity 1 28 0 282 200 59 47 chr5 41032546 41032631 -158597519 - MIR SINE MIR -2 260 175 31 0 0 0 chr5 41032938 41032969 -158597181 + AT_rich Low_complexity Low_complexity 1 31 0 1641 183 7 33 chr5 41033435 41033735 -158596415 - AluJb SINE Alu -20 292 1 2079 141 0 6 chr5 41034029 41034341 -158595809 - AluSg SINE Alu 0 310 1 240 363 0 10 chr5 41034451 41034553 -158595597 + CT-rich Low_complexity Low_complexity 4 104 0 2274 104 0 0 chr5 41034674 41034972 -158595178 + AluSq SINE Alu 1 298 -15 916 177 6 13 chr5 41035920 41036078 -158594072 - FRAM SINE Alu -11 165 9 2041 139 7 7 chr5 41037186 41037489 -158592661 + AluSx SINE Alu 1 303 -9 6652 66 9 41 chr5 41037557 41038538 -158591612 - SVA Other Other -4 1382 433 5922 64 20 15 chr5 41038555 41039590 -158590560 - SVA Other Other -520 866 1 203 29 88 0 chr5 41039590 41039624 -158590526 + GA-rich Low_complexity Low_complexity 5 41 0 1148 151 34 5 chr5 41040964 41041170 -158588980 - L1MB7 LINE L1 -10 6174 5963 1086 229 90 86 chr5 41043740 41044286 -158585864 + MLT1H LTR MaLR 2 549 0 268 352 154 38 chr5 41044684 41045028 -158585122 - L2 LINE L2 -84 3188 2805 1289 336 92 11 chr5 41045045 41045765 -158584385 - L2 LINE L2 -629 2685 1908 272 294 71 116 chr5 41045772 41046126 -158584024 + L2 LINE L2 2925 3262 -10 610 266 7 0 chr5 41047456 41047610 -158582540 - L1PB4 LINE L1 -2 6154 6000 294 330 165 37 chr5 41047613 41048086 -158582064 + L2 LINE L2 2471 3026 -246 1009 289 53 44 chr5 41048220 41048393 -158581757 + L2 LINE L2 1570 1740 -1574 2254 36 0 0 chr5 41048393 41048668 -158581482 - L1PA4 LINE L1 -1 6154 5880 1009 289 53 44 chr5 41048668 41048948 -158581202 + L2 LINE L2 1740 2027 -1287 714 297 92 35 chr5 41048993 41049396 -158580754 - LTR16B LTR ERVL -51 413 13 1124 329 72 43 chr5 41049419 41050040 -158580110 + L2 LINE L2 2030 2668 -646 635 247 0 39 chr5 41050010 41050164 -158579986 + L2 LINE L2 3165 3312 -1 * 398 228 0 43 chr5 41050227 41050319 -158579831 + MER21B LTR ERV1 1 88 -775 2621 223 121 15 chr5 41050335 41051021 -158579129 + MER21B LTR ERV1 48 806 -57 532 118 9 27 chr5 41051040 41051150 -158579000 + (TTCC)n Simple_repeat Simple_repeat 1 108 0 307 315 204 11 chr5 41051154 41051449 -158578701 + L2 LINE L2 2722 3067 -246 22 35 0 0 chr5 41051841 41051870 -158578280 + AT_rich Low_complexity Low_complexity 1 29 0 218 317 37 12 chr5 41052068 41052150 -158578000 - L2 LINE L2 -4 3268 3185 1225 166 32 14 chr5 41052268 41052485 -158577665 + AluJo SINE Alu 60 280 -32 232 306 116 16 chr5 41052539 41052660 -158577490 - L2 LINE L2 -243 3070 2938 349 313 68 41 chr5 41052661 41052955 -158577195 - L2 LINE L2 -821 2493 2192 188 365 0 0 chr5 41053714 41053766 -158576384 - L2 LINE L2 -92 3180 3129 333 336 16 8 chr5 41054100 41054222 -158575928 + L2 LINE L2 3149 3271 -1 2516 76 0 0 chr5 41054316 41054619 -158575531 + AluSc SINE Alu 1 303 -6 637 267 169 4 chr5 41056291 41056516 -158573634 - MIR SINE MIR 0 262 1 649 261 121 5 chr5 41057522 41057737 -158572413 + MIR SINE MIR 13 252 -10 2260 88 17 0 chr5 41058158 41058454 -158571696 + AluY SINE Alu 1 301 -10 407 261 155 14 chr5 41059105 41059247 -158570903 + MIR SINE MIR 100 261 -1 2221 110 0 3 chr5 41060011 41060303 -158569847 - AluSg SINE Alu -19 291 1 297 285 88 82 chr5 41061225 41061424 -158568726 + L2 LINE L2 1795 1998 -1316 1983 41 0 4 chr5 41061424 41061669 -158568481 - L1PA7 LINE L1 -2 6152 5909 297 285 88 82 chr5 41061669 41061845 -158568305 + L2 LINE L2 1998 2172 -1142 279 309 139 62 chr5 41062041 41062365 -158567785 + L2 LINE L2 2554 2902 -412 207 352 0 14 chr5 41062643 41062714 -158567436 + L2 LINE L2 3236 3305 -8 861 80 9 0 chr5 41062823 41062935 -158567215 - AluY SINE Alu -32 279 167 244 309 151 60 chr5 41063038 41063336 -158566814 + L2 LINE L2 2578 2902 -412 207 352 0 14 chr5 41063614 41063685 -158566465 + L2 LINE L2 3236 3305 -8 1348 110 19 10 chr5 41063760 41063969 -158566181 - AluSg/x SINE Alu -9 303 93 200 373 0 0 chr5 41064461 41064536 -158565614 + C-rich Low_complexity Low_complexity 1 75 0 1683 188 3 13 chr5 41064558 41064731 -158565419 - AluJo SINE Alu -11 301 131 2242 112 0 10 chr5 41064731 41065044 -158565106 - AluSg SINE Alu 0 310 1 1683 188 3 13 chr5 41065044 41065174 -158564976 - AluJo SINE Alu -181 131 1 378 129 0 0 chr5 41065203 41065265 -158564885 + (CA)n Simple_repeat Simple_repeat 2 63 0 278 222 44 0 chr5 41065266 41065356 -158564794 + (TA)n Simple_repeat Simple_repeat 2 95 0 1535 139 7 78 chr5 41065580 41065874 -158564276 - AluSx SINE Alu -34 278 6 908 248 74 4 chr5 41066158 41066416 -158563734 - L1MB7 LINE L1 -67 6117 5842 980 245 106 36 chr5 41066421 41066780 -158563370 + MLT1D LTR MaLR 5 388 -117 2123 258 63 29 chr5 41066865 41067033 -158563117 + L1M4 LINE L1 3074 3235 -2911 1808 134 12 0 chr5 41067033 41067286 -158562864 + AluSx SINE Alu 3 258 -54 2123 258 63 29 chr5 41067286 41068037 -158562113 + L1M4 LINE L1 3235 4024 -2122 2924 139 32 4 chr5 41068040 41068536 -158561614 - Tigger4(Zombi) DNA MER2_type 0 2731 2222 532 162 368 0 chr5 41068534 41068651 -158561499 - Tigger4(Zombi) DNA MER2_type -2571 160 1 * 1993 238 56 41 chr5 41068655 41068861 -158561289 + L1M4 LINE L1 4033 4234 -1912 1490 203 15 7 chr5 41068861 41069132 -158561018 + AluJo SINE Alu 10 282 -30 9936 55 11 2 chr5 41069142 41071187 -158558963 - L1PA6 LINE L1 -7 6147 4085 1993 238 56 41 chr5 41071187 41071653 -158558497 + L1M4 LINE L1 4242 4726 -1420 298 195 54 154 chr5 41071689 41071838 -158558312 + L2 LINE L2 3179 3312 -1 747 261 144 46 chr5 41072366 41072672 -158557478 + MLT1J LTR MaLR 105 440 -71 2684 222 48 25 chr5 41072800 41073565 -158556585 - L1ME1 LINE L1 -127 6039 5257 1205 162 44 59 chr5 41073566 41073838 -158556312 + MSTB1 LTR MaLR 165 432 0 572 195 114 67 chr5 41073867 41074077 -158556073 - L1ME1 LINE L1 -1048 5098 4879 390 229 49 25 chr5 41074317 41074439 -158555711 + MIR SINE MIR 125 249 -13 2332 188 36 50 chr5 41075458 41075587 -158554563 + L1M4 LINE L1 4829 4958 -1226 2124 123 3 3 chr5 41075587 41075888 -158554262 + AluSx SINE Alu 1 301 -11 2332 188 36 50 chr5 41075888 41076222 -158553928 + L1M4 LINE L1 4958 5288 -896 2520 63 0 0 chr5 41076222 41076524 -158553626 + AluY SINE Alu 1 302 -9 2332 188 36 50 chr5 41076524 41076839 -158553311 + L1M4 LINE L1 5288 5606 -578 * 3990 169 29 33 chr5 41076837 41077707 -158552443 - L1 LINE L1 -1839 4307 3442 3615 159 77 34 chr5 41077708 41077731 -158552419 + L1 LINE L1 4337 4358 -1788 3698 61 2 4 chr5 41077731 41078209 -158551941 + L1PA7 LINE L1 5677 6153 -1 3615 159 77 34 chr5 41078209 41078303 -158551847 + L1 LINE L1 4358 4447 -1699 2086 113 6 58 chr5 41078303 41078632 -158551518 + AluSx SINE Alu 1 312 0 3615 159 77 34 chr5 41078632 41078673 -158551477 + L1 LINE L1 4447 4485 -1661 2390 83 7 0 chr5 41078673 41078974 -158551176 + AluSg SINE Alu 1 303 -7 3615 159 77 34 chr5 41078974 41079610 -158550540 + L1 LINE L1 4485 5167 -979 1409 272 92 22 chr5 41079610 41080346 -158549804 - L1MEc LINE L1 -4098 2298 1511 25 0 0 0 chr5 41080901 41080926 -158549224 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 41081420 41081450 -158548700 + AT_rich Low_complexity Low_complexity 1 30 0 401 229 162 0 chr5 41081967 41082072 -158548078 - L2 LINE L2 -2 3311 3190 774 31 0 0 chr5 41082861 41082958 -158547192 + (TCCCC)n Simple_repeat Simple_repeat 5 101 0 1916 140 10 14 chr5 41082958 41083250 -158546900 - AluSx SINE Alu -21 291 1 231 260 0 0 chr5 41083560 41083610 -158546540 + MER3 DNA MER1_type 41 90 -119 * 907 177 65 0 chr5 41083577 41083763 -158546387 - MER3 DNA MER1_type -10 199 2 237 276 0 46 chr5 41083909 41083996 -158546154 - L2 LINE L2 -407 2907 2825 2410 89 0 0 chr5 41084047 41084349 -158545801 - AluSg SINE Alu -8 302 1 1036 262 37 37 chr5 41084352 41084559 -158545591 + L2 LINE L2 2959 3168 -145 1772 175 0 19 chr5 41084559 41084868 -158545282 - AluJo SINE Alu -9 303 1 1036 262 37 37 chr5 41084868 41085015 -158545135 + L2 LINE L2 3167 3313 0 1938 110 84 0 chr5 41086023 41086296 -158543854 + AluSg SINE Alu 5 300 -10 24 0 0 0 chr5 41087792 41087816 -158542334 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 41088140 41088168 -158541982 + AT_rich Low_complexity Low_complexity 1 28 0 419 301 74 0 chr5 41088406 41088569 -158541581 + MIR SINE MIR 81 255 -7 920 233 19 64 chr5 41089240 41089506 -158540644 + HAL1 LINE L1 1 254 -2253 246 336 97 0 chr5 41089514 41089627 -158540523 + HAL1 LINE L1 383 506 -2001 210 171 0 0 chr5 41089670 41089711 -158540439 + (TTG)n Simple_repeat Simple_repeat 1 41 0 790 299 45 14 chr5 41089711 41089932 -158540218 - MIR SINE MIR -12 250 23 1586 179 59 15 chr5 41089934 41090024 -158540126 + MER58B DNA MER1_type 4 89 -2331 2035 169 68 52 chr5 41090024 41090521 -158539629 - MLT1D LTR MaLR 0 505 1 1586 179 59 15 chr5 41090521 41090754 -158539396 + MER58B DNA MER1_type 89 341 0 831 251 82 98 chr5 41090760 41091420 -158538730 + HAL1 LINE L1 793 1441 -1066 1898 129 47 0 chr5 41092140 41092419 -158537731 - AluSx SINE Alu -20 292 1 267 270 153 22 chr5 41092686 41092823 -158537327 + L2 LINE L2 3159 3313 0 877 259 59 39 chr5 41093050 41093305 -158536845 - MIR SINE MIR -2 260 1 630 162 7 15 chr5 41093322 41093458 -158536692 + L1MB8 LINE L1 6044 6178 0 181 200 0 0 chr5 41093710 41093745 -158536405 + L2 LINE L2 3274 3308 -5 1751 138 0 4 chr5 41094392 41094653 -158535497 - AluSx SINE Alu -9 303 44 800 271 87 27 chr5 41094666 41094998 -158535152 - L2 LINE L2 -449 2865 2514 183 42 0 0 chr5 41095767 41095791 -158534359 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 24 0 0 0 chr5 41095914 41095938 -158534212 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr5 41095943 41095964 -158534186 + (T)n Simple_repeat Simple_repeat 1 21 0 712 114 29 9 chr5 41096010 41096115 -158534035 - U6 snRNA snRNA 0 107 1 457 236 65 96 chr5 41096524 41096753 -158533397 + MER112 DNA MER1_type 32 253 -7 291 247 13 0 chr5 41097216 41097293 -158532857 + MER113 DNA MER1_type? 4 81 -440 689 226 37 0 chr5 41097340 41097504 -158532646 - L1MB5 LINE L1 -9 6165 5996 5091 36 2 2 chr5 41097520 41098161 -158531989 - L1PA4 LINE L1 -757 5389 4749 6498 26 1 0 chr5 41098170 41098932 -158531218 + L1PA4 LINE L1 5393 6155 0 774 240 82 33 chr5 41098942 41099246 -158530904 + MER113 DNA MER1_type? 154 472 -49 222 293 155 26 chr5 41099745 41099861 -158530289 + MIR SINE MIR 118 248 -14 5283 123 40 67 chr5 41099908 41100576 -158529574 - L1MA5A LINE L1 -4 6935 6251 4259 121 19 0 chr5 41100576 41101214 -158528936 - MER39B LTR ERV1 -1 652 3 5283 123 40 67 chr5 41101214 41101547 -158528603 - L1MA5A LINE L1 -688 6251 5961 2129 124 0 13 chr5 41101547 41101854 -158528296 - AluSx SINE Alu -9 303 1 5283 123 40 67 chr5 41101854 41101919 -158528231 - L1MA5A LINE L1 -978 5961 5896 8869 206 32 34 chr5 41101935 41103118 -158527032 - L1MA5A LINE L1 -1793 4995 3812 1614 158 16 63 chr5 41103118 41103434 -158526716 - AluJb SINE Alu -11 301 1 8869 206 32 34 chr5 41103434 41103968 -158526182 - L1MA5A LINE L1 -2976 3812 3279 1647 189 7 0 chr5 41103968 41104248 -158525902 - AluJo SINE Alu -30 282 1 8869 206 32 34 chr5 41104248 41107336 -158522814 - L1MA5A LINE L1 -3509 3279 15 242 250 0 0 chr5 41107477 41107529 -158522621 + (TAA)n Simple_repeat Simple_repeat 1 52 0 753 251 121 9 chr5 41107532 41107755 -158522395 - MIR SINE MIR 0 262 15 6682 135 59 1 chr5 41108104 41109267 -158520883 + Tigger3b DNA MER2_type 1 1231 0 23 68 0 0 chr5 41109416 41109460 -158520690 + AT_rich Low_complexity Low_complexity 1 44 0 2372 103 0 0 chr5 41110083 41110394 -158519756 + AluY SINE Alu 1 311 0 340 225 225 38 chr5 41163669 41163829 -158466321 + MIR3 SINE MIR 8 197 -11 275 311 111 11 chr5 41166759 41166849 -158463301 - L2 LINE L2 -31 3241 3143 1819 186 0 0 chr5 41168011 41168317 -158461833 - AluJo SINE Alu -6 306 1 5331 202 98 56 chr5 41168336 41168509 -158461641 - L1MC4a LINE L1 0 7808 7644 2151 146 0 0 chr5 41168509 41168817 -158461333 + AluSx SINE Alu 3 310 -2 5331 202 98 56 chr5 41168817 41170472 -158459678 - L1MC4a LINE L1 -164 7644 5903 309 262 10 12 chr5 41170856 41171136 -158459014 - L1ME2 LINE L1 -229 5935 5654 502 293 118 7 chr5 41171327 41171597 -158458553 - LTR16C LTR ERVL -2 489 190 438 315 38 25 chr5 41172698 41172936 -158457214 - L1MC4a LINE L1 -1894 5914 5674 258 192 125 85 chr5 41172959 41173258 -158456892 - L1MC4a LINE L1 -789 5357 5176 1022 237 217 15 chr5 41173460 41173856 -158456294 - MLT1D LTR MaLR -29 476 1 249 330 40 0 chr5 41173892 41174065 -158456085 - L1MC4a LINE L1 -1217 4929 4750 479 295 70 61 chr5 41174165 41174507 -158455643 - L1MC4a LINE L1 -1546 4600 4256 304 229 57 9 chr5 41174559 41174664 -158455486 - L1MC4a LINE L1 -1952 4194 4085 274 231 26 0 chr5 41174697 41174775 -158455375 - MER116 DNA Mariner 0 80 1 534 190 145 169 chr5 41174840 41175171 -158454979 - L2 LINE L2 0 3313 2991 333 100 0 0 chr5 41175173 41175223 -158454927 + (G)n Simple_repeat Simple_repeat 1 50 0 316 346 44 11 chr5 41175393 41175575 -158454575 - L1MC4a LINE L1 -2230 3916 3729 194 280 20 0 chr5 41175969 41176019 -158454131 - MIR SINE MIR -102 160 110 195 42 0 0 chr5 41177216 41177240 -158452910 + (T)n Simple_repeat Simple_repeat 1 24 0 333 331 15 15 chr5 41177246 41177376 -158452774 + MER5A DNA MER1_type 50 179 -10 973 219 73 5 chr5 41177731 41177950 -158452200 - MIR SINE MIR 0 262 29 297 309 147 22 chr5 41178060 41178196 -158451954 + MIR3 SINE MIR 5 157 -51 21 0 0 0 chr5 41178623 41178644 -158451506 + AT_rich Low_complexity Low_complexity 1 21 0 1629 59 0 18 chr5 41180242 41180461 -158449689 - L1PA7 LINE L1 0 6154 5940 647 155 295 14 chr5 41181517 41181724 -158448426 + MER5C DNA MER1_type 57 321 -3 26 0 0 0 chr5 41181836 41181862 -158448288 + AT_rich Low_complexity Low_complexity 1 26 0 4256 165 62 15 chr5 41181866 41182008 -158448142 - L1MB2 LINE L1 -6 6165 6031 2253 126 21 12 chr5 41182008 41182342 -158447808 - MER1B DNA MER1_type 0 337 1 4256 165 62 15 chr5 41182342 41183406 -158446744 - L1MB2 LINE L1 -140 6031 4904 13122 156 18 15 chr5 41183600 41184815 -158445335 + L1P3 LINE L1 4 1214 -5247 180 77 0 0 chr5 41184815 41184841 -158445309 + (CAA)n Simple_repeat Simple_repeat 2 27 0 13122 156 18 15 chr5 41184841 41187441 -158442709 + L1P3 LINE L1 1214 3894 -2567 6842 129 12 37 chr5 41187542 41188936 -158441214 + L1PA8A LINE L1 2531 3890 -2256 1385 77 73 4 chr5 41188937 41189170 -158440980 + L1PA8A LINE L1 5281 5529 -602 9421 111 39 7 chr5 41189170 41191332 -158438818 + L1PA8A LINE L1 3893 6118 -13 627 166 83 24 chr5 41191775 41191934 -158438216 - L1ME2 LINE L1 -9 6302 6003 1850 162 7 7 chr5 41192020 41192310 -158437840 + AluJo SINE Alu 1 290 -22 2321 113 90 3 chr5 41192313 41192648 -158437502 + THE1B LTR MaLR 1 364 0 580 278 105 60 chr5 41194837 41195085 -158435065 + MIR SINE MIR 1 259 -3 660 261 54 14 chr5 41195686 41195895 -158434255 - MIR SINE MIR -3 259 44 233 364 117 28 chr5 41196521 41197018 -158433132 + L2 LINE L2 2420 2960 -354 2745 23 0 0 chr5 41198730 41199032 -158431118 + AluY SINE Alu 3 304 -7 1723 245 74 17 chr5 41199053 41199514 -158430636 + MLT1G1 LTR MaLR 109 595 0 261 241 203 53 chr5 41199568 41199944 -158430206 - L1MC4a LINE L1 -111 6010 5578 2211 152 48 0 chr5 41200056 41200431 -158429719 - MER57A LTR ERV1 -9 394 2 1117 153 0 0 chr5 41200432 41200602 -158429548 - MER57A-int LTR ERV1 0 7537 7368 225 132 26 0 chr5 41200602 41200640 -158429510 - LTR54B LTR ERV1 -226 272 234 421 71 18 0 chr5 41200640 41200696 -158429454 - MER57A-int LTR ERV1 -202 7335 7279 805 101 23 23 chr5 41200696 41200825 -158429325 - LTR54B LTR ERV1 -367 131 3 17496 125 32 55 chr5 41200825 41200926 -158429224 - MER57A-int LTR ERV1 -391 7146 7044 2128 78 34 20 chr5 41200926 41201219 -158428931 + AluSq SINE Alu 1 297 -16 2222 102 0 0 chr5 41201222 41201507 -158428643 - AluSg1 SINE Alu -24 285 1 17496 125 32 55 chr5 41201507 41204654 -158425496 - MER57A-int LTR ERV1 -495 7042 1927 2340 82 10 0 chr5 41204654 41204946 -158425204 + AluSp SINE Alu 1 295 -18 17496 125 32 55 chr5 41204946 41205149 -158425001 - MER57A-int LTR ERV1 -5610 1927 1721 339 234 0 0 chr5 41205250 41205327 -158424823 - MER57A-int LTR ERV1 -2890 3441 3365 555 181 0 0 chr5 41205399 41205493 -158424657 - MER57A-int LTR ERV1 -2991 3340 3247 362 217 89 66 chr5 41205566 41205801 -158424349 - MER57A-int LTR ERV1 -3724 1980 1228 1575 89 5 0 chr5 41205920 41206123 -158424027 - AluSp SINE Alu -11 302 99 257 193 88 0 chr5 41206168 41206225 -158423925 - MER34C LTR ERV1 -369 216 155 2121 138 7 0 chr5 41206230 41206534 -158423616 + AluSx SINE Alu 1 306 -6 5402 137 32 5 chr5 41206785 41207605 -158422545 - MER57A-int LTR ERV1 -6695 842 1 2624 144 18 2 chr5 41207605 41208002 -158422148 - MER57A LTR ERV1 0 403 1 1832 201 14 58 chr5 41208005 41208439 -158421711 + MLT1C LTR MaLR 53 467 0 419 152 0 0 chr5 41208608 41208674 -158421476 + MLT1F1 LTR MaLR 502 567 0 289 312 40 75 chr5 41209374 41209573 -158420577 + MIR SINE MIR 23 214 -48 210 119 70 0 chr5 41210287 41210322 -158419828 + MIR SINE MIR 30 115 -143 2398 112 0 0 chr5 41210504 41210816 -158419334 - AluSx SINE Alu 0 312 1 296 324 18 0 chr5 41211595 41211706 -158418444 - MIR3 SINE MIR -6 202 90 331 260 26 84 chr5 41211968 41211981 -158418169 + MIR SINE MIR 117 129 -133 2270 157 10 54 chr5 41211981 41212389 -158417761 + MLT1B LTR MaLR 1 390 0 331 260 26 84 chr5 41212389 41212529 -158417621 + MIR SINE MIR 129 261 -1 305 304 125 24 chr5 41214023 41214191 -158415959 - MER5A DNA MER1_type -4 185 1 198 218 75 27 chr5 41214485 41214569 -158415581 - MIR SINE MIR -64 144 107 448 246 42 8 chr5 41215066 41215184 -158414966 + MIR SINE MIR 23 144 -64 184 222 0 0 chr5 41215788 41215824 -158414326 + L2 LINE L2 3277 3312 -1 238 181 64 0 chr5 41216037 41216131 -158414019 + (TA)n Simple_repeat Simple_repeat 1 100 0 225 172 111 71 chr5 41216137 41216236 -158413914 - L1MB2 LINE L1 -1 6170 6068 2142 123 3 0 chr5 41216250 41216542 -158413608 - AluSp SINE Alu -20 293 1 22 56 0 0 chr5 41216642 41216678 -158413472 + AT_rich Low_complexity Low_complexity 1 36 0 242 290 0 0 chr5 41216990 41217052 -158413098 - L2 LINE L2 -28 3285 3224 249 314 20 10 chr5 41217124 41217226 -158412924 - L2 LINE L2 -673 2641 2539 2445 84 0 3 chr5 41217226 41217537 -158412613 + AluY SINE Alu 1 310 -1 271 204 0 0 chr5 41217713 41217762 -158412388 + Charlie8 DNA MER1_type 128 176 -2241 31 0 0 0 chr5 41218541 41218572 -158411578 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr5 41218745 41218766 -158411384 + (GCTG)n Simple_repeat Simple_repeat 1 21 0 208 277 0 0 chr5 41219296 41219343 -158410807 + L2 LINE L2 3133 3179 -93 2748 121 31 5 chr5 41219383 41219771 -158410379 + MER48 LTR ERV1 1 398 0 336 118 289 13 chr5 41219821 41219897 -158410253 + MER4D LTR ERV1 1 97 -775 2014 185 91 37 chr5 41219898 41220362 -158409788 - LTR2B LTR ERV1 0 490 2 45373 100 28 27 chr5 41220362 41226160 -158403990 - Harlequin LTR ERV1 -8 6888 939 1057 105 0 0 chr5 41226160 41226303 -158403847 - AluY SINE Alu -16 295 153 45373 100 28 27 chr5 41226303 41227243 -158402907 - Harlequin LTR ERV1 -5957 939 1 1910 191 75 30 chr5 41227243 41227682 -158402468 - LTR2B LTR ERV1 0 490 32 3636 165 70 57 chr5 41227698 41228499 -158401651 + MER4D LTR ERV1 93 903 0 228 266 180 29 chr5 41228902 41229041 -158401109 - MIR SINE MIR -83 179 20 225 287 178 0 chr5 41229712 41229813 -158400337 + MIR SINE MIR 28 146 -62 352 307 114 76 chr5 41229990 41230479 -158399671 + L2 LINE L2 2470 2976 -337 349 289 0 0 chr5 41230955 41231071 -158399079 - MIR3 SINE MIR -3 205 89 2209 119 0 0 chr5 41231174 41231468 -158398682 - AluSx SINE Alu -18 294 1 260 331 111 22 chr5 41231489 41231670 -158398480 - MIR SINE MIR -64 198 2 354 246 12 35 chr5 41231842 41231943 -158398207 + MIR SINE MIR 5 103 -105 266 130 0 0 chr5 41231949 41231995 -158398155 + Alu SINE Alu 257 302 0 210 253 76 0 chr5 41232064 41232143 -158398007 + MIR SINE MIR 108 192 -70 1521 127 125 30 chr5 41233404 41233702 -158396448 + MSTA LTR MaLR 1 342 -33 1932 122 0 4 chr5 41233702 41233972 -158396178 - AluSx SINE Alu -4 308 40 1521 127 125 30 chr5 41233972 41234010 -158396140 + MSTA LTR MaLR 342 375 0 194 322 129 0 chr5 41234416 41234587 -158395563 + L2 LINE L2 2128 2320 -994 3264 76 62 5 chr5 41234847 41235267 -158394883 + MLT2A1 LTR ERVL 1 444 0 33221 72 8 9 chr5 41235267 41236650 -158393500 + HERVL-A1 LTR ERVL 1 1384 -4270 2309 107 7 0 chr5 41236650 41236959 -158393191 + AluY SINE Alu 1 311 0 33221 72 8 9 chr5 41236959 41239779 -158390371 + HERVL-A1 LTR ERVL 1384 4200 -1454 3288 190 18 16 chr5 41239825 41240234 -158389916 + L1MB5 LINE L1 5549 5961 -213 2357 101 0 0 chr5 41240234 41240532 -158389618 - AluSg SINE Alu -12 298 1 3288 190 18 16 chr5 41240532 41240747 -158389403 + L1MB5 LINE L1 5961 6174 0 848 278 53 35 chr5 41240930 41241268 -158388882 - L2 LINE L2 -85 3228 2885 624 176 46 9 chr5 41241291 41241399 -158388751 + MER45A DNA AcHobo 63 174 -4 1036 240 86 31 chr5 41241434 41241810 -158388340 + MER57A LTR ERV1 1 402 0 669 243 151 0 chr5 41243480 41243632 -158386518 + MER5A DNA MER1_type 9 183 -6 895 199 15 0 chr5 41244313 41244509 -158385641 - L1MD3 LINE L1 -10 7985 7787 1949 108 28 3 chr5 41244509 41244797 -158385353 + AluSx SINE Alu 1 295 -17 2287 138 19 20 chr5 41244834 41245198 -158384952 + MLT1A1 LTR MaLR 1 505 0 2494 177 35 8 chr5 41245203 41245688 -158384462 - L1MC4a LINE L1 -207 7601 7104 249 167 0 0 chr5 41245870 41245924 -158384226 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 1094 261 99 34 chr5 41246275 41246719 -158383431 + MLT1K LTR MaLR 1 473 -3 509 121 0 0 chr5 41246755 41246821 -158383329 + MER1B DNA MER1_type 264 329 0 986 281 36 17 chr5 41248010 41248312 -158381838 + L2 LINE L2 2551 2858 -456 1075 258 49 53 chr5 41248403 41248814 -158381336 - MLT1I LTR MaLR 0 409 1 1916 78 39 11 chr5 41248926 41249209 -158380941 + L1MA2 LINE L1 6014 6304 0 449 192 41 81 chr5 41249498 41249670 -158380480 + MER103 DNA DNA 2 166 0 283 238 86 57 chr5 41250117 41250222 -158379928 + L2 LINE L2 2946 3053 -219 1825 109 0 0 chr5 41250868 41251115 -158379035 - AluSx SINE Alu -39 273 27 574 196 217 22 chr5 41251220 41251450 -158378700 + ORSL DNA AcHobo 1 275 0 786 154 5 135 chr5 41251594 41251802 -158378348 + MER53 DNA DNA 7 187 -2 455 0 18 0 chr5 41252871 41252926 -158377224 + (TG)n Simple_repeat Simple_repeat 2 57 0 360 233 41 99 chr5 41253103 41253275 -158376875 - MER103 DNA DNA -3 163 2 610 274 53 31 chr5 41253823 41254049 -158376101 + L2 LINE L2 3081 3311 -2 1861 148 10 3 chr5 41255106 41255403 -158374747 - AluJo SINE Alu -7 305 7 453 66 0 0 chr5 41257034 41257095 -158373055 + (TCC)n Simple_repeat Simple_repeat 3 63 0 531 280 27 7 chr5 41258044 41258194 -158371956 - MER5A DNA MER1_type -1 188 36 251 27 0 27 chr5 41259138 41259175 -158370975 + (TG)n Simple_repeat Simple_repeat 2 37 0 1107 245 41 41 chr5 41259292 41259635 -158370515 + L2 LINE L2 2569 2911 -403 932 207 29 29 chr5 41259638 41259750 -158370400 - MER20 DNA MER1_type -8 211 97 2553 114 3 14 chr5 41259750 41260118 -158370032 + THE1B LTR MaLR 1 364 0 932 207 29 29 chr5 41260118 41260213 -158369937 - MER20 DNA MER1_type -121 98 4 184 103 0 51 chr5 41260232 41260271 -158369879 + L2 LINE L2 2927 2963 -350 581 285 45 49 chr5 41260339 41260627 -158369523 + L2 LINE L2 2971 3257 -56 2276 94 0 3 chr5 41260989 41261296 -158368854 - AluSq SINE Alu -7 306 1 244 200 15 0 chr5 41261993 41262040 -158368110 - MER53 DNA DNA -3 186 136 1887 117 8 0 chr5 41262040 41262305 -158367845 + L1MC1 LINE L1 6061 6327 -6 244 200 15 0 chr5 41262305 41262322 -158367828 - MER53 DNA DNA -53 136 121 279 297 0 0 chr5 41264271 41264345 -158365805 + (CATA)n Simple_repeat Simple_repeat 2 75 0 387 280 40 8 chr5 41264627 41264759 -158365391 - MIR SINE MIR -62 146 62 298 261 0 72 chr5 41265224 41265335 -158364815 + MIR SINE MIR 29 131 -77 350 267 105 37 chr5 41267642 41267829 -158362321 + MIR SINE MIR 50 253 -9 715 291 55 14 chr5 41268177 41268466 -158361684 + Charlie2 DNA MER1_type 1 301 -2481 1314 272 74 27 chr5 41268488 41268974 -158361176 + L1MC4 LINE L1 7392 7900 -142 530 184 253 13 chr5 41269221 41269379 -158360771 + Charlie2a DNA MER1_type 1468 1663 -1199 494 192 96 8 chr5 41269395 41269520 -158360630 + Charlie2a DNA MER1_type 2724 2859 -3 501 282 92 7 chr5 41270120 41270262 -158359888 + MIR SINE MIR 1 154 -108 209 194 0 0 chr5 41270984 41271020 -158359130 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 480 253 68 19 chr5 41272248 41272410 -158357740 - MIR SINE MIR -54 208 39 494 250 8 16 chr5 41272818 41272942 -158357208 + L2 LINE L2 3187 3309 -4 819 179 28 0 chr5 41274282 41274427 -158355723 + MER5B DNA MER1_type 3 151 -27 232 254 0 17 chr5 41274550 41274609 -158355541 - MIR SINE MIR -157 105 48 23 0 0 0 chr5 41276139 41276162 -158353988 + GC_rich Low_complexity Low_complexity 1 23 0 187 276 207 0 chr5 41277179 41277266 -158352884 + MIR SINE MIR 158 262 0 259 176 78 0 chr5 41283519 41283570 -158346580 - L2 LINE L2 -14 3258 3204 2002 136 0 0 chr5 41284449 41284743 -158345407 + AluSx SINE Alu 9 302 -10 299 182 80 57 chr5 41284744 41284832 -158345318 + MER5B DNA MER1_type 55 144 -34 718 160 56 0 chr5 41286443 41286568 -158343582 - MER58B DNA MER1_type -2 339 208 548 184 0 0 chr5 41286611 41286698 -158343452 - MER58B DNA MER1_type -252 89 3 467 179 32 11 chr5 41286740 41286835 -158343315 - MIR3 SINE MIR -22 186 90 330 26 0 0 chr5 41287375 41287414 -158342736 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2215 112 0 6 chr5 41287428 41287741 -158342409 + AluSx SINE Alu 1 311 -1 754 154 8 0 chr5 41287741 41287858 -158342292 - AluJo/FLAM SINE Alu -184 118 1 188 288 59 59 chr5 41288317 41288435 -158341715 + MIR SINE MIR 17 134 -128 187 218 109 18 chr5 41288798 41288853 -158341297 - MIR SINE MIR -71 191 132 1306 254 23 3 chr5 41289450 41289749 -158340401 + MLT1H LTR MaLR 2 306 -243 234 264 88 48 chr5 41289979 41290104 -158340046 + MARNA DNA Mariner 409 538 -48 1769 151 18 85 chr5 41290723 41291113 -158339037 - L1MA7 LINE L1 0 6291 5928 523 157 24 0 chr5 41292354 41292437 -158337713 - MER58B DNA MER1_type 0 341 257 890 200 47 5 chr5 41292545 41292735 -158337415 - MER58B DNA MER1_type -90 251 54 263 260 16 71 chr5 41292824 41292951 -158337199 + MIR SINE MIR 102 221 -41 910 268 170 54 chr5 41292993 41293280 -158336870 - MLT1L LTR MaLR 0 615 363 2379 59 0 7 chr5 41293280 41293585 -158336565 - AluY SINE Alu -8 303 1 910 268 170 54 chr5 41293585 41293816 -158336334 - MLT1L LTR MaLR -252 363 37 197 246 154 0 chr5 41294670 41294735 -158335415 + L3 LINE CR1 1502 1576 -1 216 158 0 0 chr5 41294839 41294877 -158335273 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 241 324 27 74 chr5 41295027 41295175 -158334975 - L2 LINE L2 -193 3079 2939 581 109 0 10 chr5 41295187 41295288 -158334862 + (TCCA)n Simple_repeat Simple_repeat 3 102 0 329 213 25 82 chr5 41295909 41296031 -158334119 - MIR3 SINE MIR -3 205 91 399 268 167 0 chr5 41296132 41296270 -158333880 + MIR SINE MIR 28 188 -74 405 192 21 62 chr5 41296307 41296427 -158333723 + MLT1H LTR MaLR 92 236 -232 1199 199 119 11 chr5 41296487 41296748 -158333402 - L1ME LINE L1 -442 5722 5434 252 292 11 27 chr5 41297242 41297353 -158332797 + CT-rich Low_complexity Low_complexity 1 109 0 430 209 18 9 chr5 41297653 41297763 -158332387 - L1ME LINE L1 -318 5803 5693 1504 179 21 14 chr5 41297784 41298074 -158332076 + AluJb SINE Alu 1 292 -20 469 301 21 11 chr5 41298083 41298269 -158331881 - L1ME LINE L1 -422 5699 5512 21 71 0 0 chr5 41298290 41298332 -158331818 + AT_rich Low_complexity Low_complexity 1 42 0 836 304 4 39 chr5 41298580 41298860 -158331290 + MLT1I LTR MaLR 3 272 -137 259 246 0 16 chr5 41299073 41299134 -158331016 + MLT1I LTR MaLR 348 407 -2 180 97 0 0 chr5 41299585 41299616 -158330534 + (TG)n Simple_repeat Simple_repeat 1 31 0 378 61 0 0 chr5 41299616 41299665 -158330485 + (GA)n Simple_repeat Simple_repeat 2 50 0 272 281 34 48 chr5 41300459 41300605 -158329545 - MER5A DNA MER1_type 0 189 46 285 188 0 0 chr5 41300941 41300989 -158329161 - L2 LINE L2 -14 3299 3252 365 70 18 0 chr5 41301118 41301175 -158328975 + (TG)n Simple_repeat Simple_repeat 1 58 0 421 248 62 8 chr5 41301307 41301436 -158328714 - L2 LINE L2 0 3313 3178 647 283 63 1 chr5 41302443 41302746 -158327404 - LTR16C LTR ERVL -134 357 3 394 270 18 9 chr5 41302987 41303098 -158327052 - MIR SINE MIR -116 146 35 222 266 109 0 chr5 41303187 41303251 -158326899 - L2 LINE L2 -9 3304 3234 1119 278 75 26 chr5 41303314 41303891 -158326259 - MER115 DNA AcHobo 0 693 75 22 88 0 0 chr5 41304468 41304525 -158325625 + AT_rich Low_complexity Low_complexity 1 57 0 1129 68 6 6 chr5 41304762 41304923 -158325227 + (TCTA)n Simple_repeat Simple_repeat 4 164 0 1738 150 0 51 chr5 41304954 41305267 -158324883 - AluJo SINE Alu -15 297 1 1935 198 16 23 chr5 41305530 41305960 -158324190 - MER63B DNA MER1_type -6 430 4 1081 176 88 15 chr5 41305987 41306191 -158323959 - MER20 DNA MER1_type 0 219 1 260 259 19 0 chr5 41306291 41306345 -158323805 - L2 LINE L2 -67 3205 3151 821 191 124 5 chr5 41306958 41307152 -158322998 - MER20 DNA MER1_type 0 219 3 260 259 19 0 chr5 41307252 41307306 -158322844 - L2 LINE L2 -67 3205 3151 488 264 17 40 chr5 41308410 41308584 -158321566 + MER104 DNA Tc2 7 176 -4 724 281 43 0 chr5 41308651 41308861 -158321289 + MIR SINE MIR 8 226 -36 2369 159 43 26 chr5 41309595 41310016 -158320134 - MSTA LTR MaLR 0 428 1 905 221 24 19 chr5 41311182 41311390 -158318760 + MER63A DNA MER1_type 2 210 0 1312 159 0 10 chr5 41311409 41311617 -158318533 - MER20 DNA MER1_type -2 217 12 2833 93 0 0 chr5 41311746 41312110 -158318040 - THE1B LTR MaLR 0 364 1 206 353 24 0 chr5 41312280 41312365 -158317785 - MIR3 SINE MIR -35 173 87 231 326 109 11 chr5 41314351 41314443 -158315707 + L2 LINE L2 3146 3246 -26 1305 207 31 34 chr5 41314457 41314843 -158315307 - L1ME2 LINE L1 -3 6175 5785 1661 213 37 93 chr5 41315002 41315442 -158314708 + MLT1J LTR MaLR 3 410 -101 2297 98 0 0 chr5 41315442 41315761 -158314389 + AluSx SINE Alu 1 319 0 1661 213 37 93 chr5 41315761 41315858 -158314292 + MLT1J LTR MaLR 410 511 0 21 36 0 0 chr5 41316100 41316128 -158314022 + AT_rich Low_complexity Low_complexity 1 28 0 346 233 17 12 chr5 41317057 41317229 -158312921 + (TA)n Simple_repeat Simple_repeat 1 173 0 606 258 143 14 chr5 41317306 41317523 -158312627 - MIR SINE MIR 0 262 18 481 157 10 10 chr5 41318755 41318857 -158311293 + CT-rich Low_complexity Low_complexity 3 104 0 2027 170 86 105 chr5 41318904 41319476 -158310674 + MLT1E1 LTR MaLR 80 640 -14 241 170 64 0 chr5 41321003 41321050 -158309100 + MIR SINE MIR 117 166 -96 610 266 140 0 chr5 41321085 41321292 -158308858 + MIR SINE MIR 17 252 -10 369 224 252 21 chr5 41321689 41321832 -158308318 + MER5B DNA MER1_type 1 176 -2 258 255 302 7 chr5 41322231 41322380 -158307770 + MIR SINE MIR 4 196 -66 344 243 11 11 chr5 41322432 41322609 -158307541 + (ATGGTG)n Simple_repeat Simple_repeat 1 177 0 809 296 115 11 chr5 41322743 41323118 -158307032 - MLT2F LTR ERVL -245 418 5 235 175 0 0 chr5 41324147 41324187 -158305963 + MIR SINE MIR 113 152 -56 277 269 108 16 chr5 41324384 41324538 -158305612 + MLT1J2 LTR MaLR 32 234 -303 2224 119 0 3 chr5 41325976 41326270 -158303880 + AluSg SINE Alu 1 293 -17 683 254 71 0 chr5 41326273 41326494 -158303656 + MIR SINE MIR 23 260 -2 386 257 9 18 chr5 41326638 41326747 -158303403 - L2 LINE L2 0 3313 3206 254 259 134 9 chr5 41326749 41326861 -158303289 + L1ME LINE L1 5758 5883 -238 412 243 0 27 chr5 41327101 41327212 -158302938 - L2 LINE L2 0 3313 3206 272 254 127 17 chr5 41327214 41327332 -158302818 + L1ME LINE L1 5758 5888 -233 2389 145 39 12 chr5 41328054 41328469 -158301681 + MSTB LTR MaLR 1 426 0 517 150 286 8 chr5 41329015 41329148 -158301002 + MER97b DNA MER1_type? 10 179 -874 932 105 46 0 chr5 41329669 41329822 -158300328 + MER5A DNA MER1_type 27 186 -3 1486 171 31 49 chr5 41329967 41330253 -158299897 + AluJb SINE Alu 1 281 -31 282 243 153 0 chr5 41330721 41330832 -158299318 + MIR SINE MIR 48 175 -87 536 81 0 81 chr5 41331065 41331152 -158298998 + MADE1 DNA Mariner 1 80 0 1988 188 41 47 chr5 41331647 41332132 -158298018 + MLT1D LTR MaLR 21 502 -3 336 296 0 0 chr5 41332545 41332626 -158297524 + MIR SINE MIR 59 139 -123 1976 141 27 3 chr5 41333724 41334023 -158296127 + AluSx SINE Alu 1 306 -6 23 33 0 0 chr5 41334349 41334379 -158295771 + AT_rich Low_complexity Low_complexity 1 30 0 180 214 0 24 chr5 41334639 41334681 -158295469 - L2 LINE L2 -50 3222 3182 606 181 237 6 chr5 41334804 41334981 -158295169 + MER20 DNA MER1_type 1 218 -1 471 279 22 7 chr5 41335202 41335338 -158294812 + MIR3 SINE MIR 58 195 -13 22 0 0 0 chr5 41335460 41335482 -158294668 + AT_rich Low_complexity Low_complexity 1 22 0 213 273 58 41 chr5 41336704 41336825 -158293325 - L2 LINE L2 -1 3312 3190 644 259 118 72 chr5 41336882 41337407 -158292743 - MLT1H LTR MaLR 0 549 1 21 36 0 0 chr5 41337471 41337499 -158292651 + AT_rich Low_complexity Low_complexity 1 28 0 2145 127 7 0 chr5 41337566 41337857 -158292293 - AluSc SINE Alu -16 293 1 228 35 0 0 chr5 41338686 41338715 -158291435 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 445 201 222 14 chr5 41338756 41338900 -158291250 - MER5B DNA MER1_type -4 174 1 2434 229 87 13 chr5 41340431 41341547 -158288603 - L1MC4 LINE L1 -149 7893 6541 2206 123 3 7 chr5 41342086 41342386 -158287764 + AluSp SINE Alu 3 301 -12 454 168 42 21 chr5 41342416 41342511 -158287639 - L1MC4 LINE L1 -1497 6545 6449 1901 198 46 50 chr5 41342740 41343239 -158286911 + Charlie4a DNA MER1_type 2 498 -10 216 290 14 0 chr5 41343344 41343413 -158286737 + MIR SINE MIR 192 261 -1 376 239 116 99 chr5 41343468 41343752 -158286398 + MLT1H LTR MaLR 209 497 -52 * 1892 175 101 117 chr5 41343729 41344404 -158285746 + MER63C DNA MER1_type 267 930 0 252 309 0 44 chr5 41344440 41344576 -158285574 - LTR16C LTR ERVL -86 405 276 235 296 12 0 chr5 41345635 41345716 -158284434 + MARNA DNA Mariner 277 358 -228 527 271 81 41 chr5 41345734 41345955 -158284195 - MIR SINE MIR -21 241 12 897 252 111 47 chr5 41345987 41346348 -158283802 - L2 LINE L2 -33 3280 2897 1572 134 112 4 chr5 41346349 41346625 -158283525 + AluJo SINE Alu 1 306 -6 1607 175 12 118 chr5 41346641 41347046 -158283104 + MLT1A1 LTR MaLR 1 362 -3 540 244 71 62 chr5 41347065 41347290 -158282860 - L2 LINE L2 -508 2806 2580 789 268 128 62 chr5 41348029 41348334 -158281816 + L2 LINE L2 2385 2737 -577 2130 120 10 10 chr5 41348334 41348633 -158281517 - AluSp SINE Alu -14 299 1 789 268 128 62 chr5 41348633 41348827 -158281323 + L2 LINE L2 2737 2917 -397 353 213 50 0 chr5 41348929 41349009 -158281141 - MER94 DNA DNA -50 84 1 209 234 75 56 chr5 41349053 41349160 -158280990 - L2 LINE L2 -1 3312 3204 2586 167 31 2 chr5 41351171 41351585 -158278565 + MSTB LTR MaLR 1 426 0 336 48 0 0 chr5 41352207 41352249 -158277901 + (CA)n Simple_repeat Simple_repeat 1 42 0 342 205 51 26 chr5 41352791 41352869 -158277281 + MIR SINE MIR 28 107 -155 551 246 39 30 chr5 41352901 41353104 -158277046 - MIR SINE MIR -55 207 3 212 301 36 0 chr5 41353136 41353219 -158276931 + MIR SINE MIR 124 209 -53 593 239 193 10 chr5 41353386 41353583 -158276567 - MIR SINE MIR -17 245 13 300 27 0 0 chr5 41353656 41353693 -158276457 + (TG)n Simple_repeat Simple_repeat 2 38 0 6983 111 34 8 chr5 41353762 41355294 -158274856 + L1MA2 LINE L1 4737 6304 0 355 323 93 58 chr5 41355929 41356220 -158273930 - L2 LINE L2 -44 3228 2928 2078 140 3 0 chr5 41357107 41357399 -158272751 - AluSx SINE Alu -19 293 1 223 240 0 93 chr5 41357893 41357968 -158272182 - MIR3 SINE MIR -135 73 6 614 250 60 24 chr5 41358044 41358212 -158271938 + MER5B DNA MER1_type 1 174 -4 853 210 113 16 chr5 41358807 41358993 -158271157 - MER63A DNA MER1_type -4 206 3 1607 241 106 34 chr5 41359108 41359807 -158270343 + L2 LINE L2 2302 3313 0 320 305 42 0 chr5 41359911 41360006 -158270144 - MIR3 SINE MIR -33 175 77 682 50 0 0 chr5 41361177 41361257 -158268893 + L1PA8 LINE L1 6075 6154 -18 306 0 0 0 chr5 41361258 41361292 -158268858 + (CA)n Simple_repeat Simple_repeat 2 35 0 800 259 81 24 chr5 41361467 41361714 -158268436 + MIR SINE MIR 1 261 -1 294 299 69 23 chr5 41362661 41362835 -158267315 + L2 LINE L2 2013 2194 -1120 700 244 78 69 chr5 41362851 41363273 -158266877 - HAL1 LINE L1 -34 2473 2048 337 295 139 12 chr5 41363436 41363602 -158266548 - HAL1 LINE L1 -686 1821 1635 474 288 0 0 chr5 41363670 41363802 -158266348 - HAL1 LINE L1 -880 1627 1496 2789 234 107 18 chr5 41363883 41364914 -158265236 - L1ME3 LINE L1 -45 6117 4990 852 282 57 31 chr5 41364909 41365367 -158264783 - HAL1 LINE L1 -1004 1503 1034 * 234 387 65 16 chr5 41365765 41366013 -158264137 + L2 LINE L2 2441 2700 -614 * 629 176 22 52 chr5 41366010 41366109 -158264041 + L2 LINE L2 3182 3277 -36 2464 134 22 3 chr5 41366109 41366466 -158263684 - THE1B LTR MaLR 0 364 1 629 176 22 52 chr5 41366466 41366502 -158263648 + L2 LINE L2 3277 3313 0 308 307 63 94 chr5 41366605 41366892 -158263258 + L2 LINE L2 2806 3083 -189 1117 263 94 38 chr5 41366933 41367305 -158262845 + MLT1I LTR MaLR 9 401 -8 483 308 111 11 chr5 41367443 41367667 -158262483 - MIR SINE MIR -13 249 3 2210 193 100 19 chr5 41368916 41369435 -158260715 - MER74B LTR ERVL -3 619 59 374 271 153 21 chr5 41369478 41369622 -158260528 - MIR SINE MIR -50 212 50 351 192 51 26 chr5 41370408 41370486 -158259664 + MIR SINE MIR 28 107 -155 560 243 45 30 chr5 41370517 41370719 -158259431 - MIR SINE MIR -55 207 3 371 270 103 0 chr5 41370751 41370877 -158259273 + MIR SINE MIR 124 262 0 1231 116 0 29 chr5 41371657 41371830 -158258320 + AluSg/x SINE Alu 134 301 -11 804 297 84 3 chr5 41372544 41372830 -158257320 + MLT1I LTR MaLR 2 310 -99 1194 126 29 29 chr5 41373194 41373400 -158256750 + MLT2C2 LTR ERVL 5 210 -254 30 103 0 0 chr5 41373436 41373543 -158256607 + AT_rich Low_complexity Low_complexity 1 107 0 406 288 46 17 chr5 41374501 41374701 -158255449 - MER63 DNA MER1_type 0 1062 1 376 318 104 10 chr5 41375161 41375353 -158254797 - MER63A DNA MER1_type 0 210 1 264 357 102 0 chr5 41376016 41376114 -158254036 + L2 LINE L2 3126 3233 -39 21 36 0 0 chr5 41376379 41376407 -158253743 + AT_rich Low_complexity Low_complexity 1 28 0 379 0 39 0 chr5 41377395 41377446 -158252704 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 186 43 0 0 chr5 41378805 41378828 -158251322 + (T)n Simple_repeat Simple_repeat 1 23 0 506 289 123 8 chr5 41379688 41379941 -158250209 - L1ME3A LINE L1 -311 5859 5578 267 150 0 0 chr5 41380911 41380951 -158249199 - MER3 DNA MER1_type -165 44 5 530 291 118 8 chr5 41380984 41381238 -158248912 - L1ME3A LINE L1 -311 5859 5578 228 111 0 0 chr5 41381348 41381384 -158248766 + (TCTG)n Simple_repeat Simple_repeat 2 37 0 976 224 90 57 chr5 41381560 41381859 -158248291 - MLT1F LTR MaLR -23 519 211 331 340 0 11 chr5 41382523 41382617 -158247533 + L2 LINE L2 3155 3247 -25 390 311 37 30 chr5 41383245 41383380 -158246770 + L3 LINE CR1 1361 1496 -81 1028 186 0 31 chr5 41383883 41384025 -158246125 - MER5A DNA MER1_type -1 188 52 2390 186 25 48 chr5 41384025 41384542 -158245608 - MLT1D LTR MaLR 0 505 1 1028 186 0 31 chr5 41384542 41384593 -158245557 - MER5A DNA MER1_type -137 52 1 269 324 115 14 chr5 41385004 41385143 -158245007 - MIR SINE MIR -30 232 80 788 236 22 0 chr5 41386669 41386851 -158243299 - MIR SINE MIR -56 206 21 1867 163 30 0 chr5 41386866 41387167 -158242983 - AluJb SINE Alu -2 310 1 323 144 22 33 chr5 41387206 41387296 -158242854 + CT-rich Low_complexity Low_complexity 4 92 0 267 286 0 36 chr5 41387342 41387426 -158242724 - L2 LINE L2 -5 3267 3187 6818 25 28 1 chr5 41387590 41388391 -158241759 + L1PA4 LINE L1 5332 6153 -2 256 214 18 0 chr5 41389411 41389467 -158240683 - MLT2C1 LTR ERVL 0 520 464 247 24 24 24 chr5 41389538 41389558 -158240592 + (GA)n Simple_repeat Simple_repeat 2 21 -21 2258 111 0 10 chr5 41389558 41389864 -158240286 + AluSq SINE Alu 1 303 -10 247 24 24 24 chr5 41389864 41389884 -158240266 + (GA)n Simple_repeat Simple_repeat 20 42 0 2047 153 24 6 chr5 41389887 41390227 -158239923 - MLT2C1 LTR ERVL -51 346 1 498 331 64 0 chr5 41390442 41390614 -158239536 - MER91A DNA MER1_type -13 183 1 768 188 7 0 chr5 41391104 41391242 -158238908 - L1ME3A LINE L1 -8 6162 6024 266 230 103 73 chr5 41391539 41391743 -158238407 + L1ME4a LINE L1 5725 5934 -187 2151 127 0 0 chr5 41391748 41392040 -158238110 + AluSc SINE Alu 1 292 -17 352 339 27 27 chr5 41393095 41393281 -158236869 - MIR3 SINE MIR -3 205 20 1416 224 24 48 chr5 41393537 41393758 -158236392 - LTR16C LTR ERVL -5 486 274 995 169 30 82 chr5 41393758 41393989 -158236161 - MER20 DNA MER1_type 0 219 1 1416 224 24 48 chr5 41393989 41394097 -158236053 - LTR16C LTR ERVL -217 274 165 394 272 30 94 chr5 41394276 41394478 -158235672 - L2 LINE L2 -1 3312 3124 735 245 186 59 chr5 41394515 41394886 -158235264 + L2 LINE L2 2894 3311 -2 489 322 112 29 chr5 41394896 41395288 -158234862 - L2 LINE L2 -206 3066 2643 577 243 43 32 chr5 41395626 41395824 -158234326 + MLT1I LTR MaLR 1 209 -200 243 313 0 0 chr5 41395866 41395933 -158234217 + MIR SINE MIR 20 86 -122 1896 133 0 0 chr5 41395969 41396232 -158233918 - AluSx SINE Alu -16 296 34 735 176 7 37 chr5 41396253 41396389 -158233761 - FLAM_A SINE Alu -1 132 1 191 304 43 61 chr5 41397273 41397388 -158232762 + MIR SINE MIR 24 137 -71 24 0 0 0 chr5 41397760 41397784 -158232366 + AT_rich Low_complexity Low_complexity 1 24 0 345 289 39 56 chr5 41397784 41397964 -158232186 - MIR3 SINE MIR -2 206 30 216 271 40 13 chr5 41398376 41398527 -158231623 + (TA)n Simple_repeat Simple_repeat 1 155 0 276 224 0 0 chr5 41398826 41398893 -158231257 + (TATG)n Simple_repeat Simple_repeat 2 68 0 383 217 0 12 chr5 41400159 41400242 -158229908 + MIR3 SINE MIR 79 160 -48 412 171 89 57 chr5 41400437 41400531 -158229619 + L1MEc LINE L1 25 125 -6271 7445 120 48 18 chr5 41400531 41401155 -158228995 + Tigger3b DNA MER2_type 1 605 -2423 2241 112 3 0 chr5 41401155 41401450 -158228700 - AluSp SINE Alu -16 297 2 7445 120 48 18 chr5 41401450 41402020 -158228130 + Tigger3b DNA MER2_type 605 1231 0 412 171 89 57 chr5 41402020 41402048 -158228102 + L1MEc LINE L1 125 151 -6245 * 3420 232 53 7 chr5 41402043 41402918 -158227232 + L1MEc LINE L1 433 1347 -5049 1807 229 89 14 chr5 41402918 41403336 -158226814 - MLT1D LTR MaLR 0 505 55 1297 198 70 89 chr5 41403336 41403750 -158226400 + MLT1C LTR MaLR 1 406 -61 2252 218 97 16 chr5 41403750 41403980 -158226170 + L1MEc LINE L1 1388 1598 -4798 3840 115 2 6 chr5 41403980 41404493 -158225657 + MER9 LTR ERVK 1 511 0 2252 218 97 16 chr5 41404493 41404973 -158225177 + L1MEc LINE L1 1598 2156 -4240 369 296 12 29 chr5 41405062 41405234 -158224916 + L1MC4 LINE L1 7872 8040 -2 * 4906 147 46 1 chr5 41405226 41406059 -158224091 + L1MB2 LINE L1 5299 6168 -3 1130 256 25 45 chr5 41406080 41406514 -158223636 + L1ME1 LINE L1 5738 6162 -4 486 270 15 7 chr5 41406601 41406738 -158223412 + L1ME LINE L1 5531 5668 -453 583 320 89 32 chr5 41407354 41408260 -158221890 + L1MEc LINE L1 2322 3279 -2936 1932 121 4 0 chr5 41408628 41408893 -158221257 - AluY SINE Alu -10 301 36 782 276 58 33 chr5 41409956 41410325 -158219825 - LTR16C LTR ERVL 0 491 63 440 310 13 0 chr5 41412308 41412463 -158217687 + (TGG)n Simple_repeat Simple_repeat 2 158 0 365 283 134 21 chr5 41412549 41412713 -158217437 + MER5A DNA MER1_type 4 189 0 225 94 0 0 chr5 41413191 41413223 -158216927 + (CA)n Simple_repeat Simple_repeat 1 32 0 1106 263 113 14 chr5 41413324 41413707 -158216443 - MLT1G1 LTR MaLR 0 588 167 344 233 86 43 chr5 41414777 41414893 -158215257 - L2 LINE L2 -11 3302 3182 297 191 0 29 chr5 41414970 41415038 -158215112 + MLT1J1 LTR MaLR 23 88 -358 288 0 0 0 chr5 41416114 41416146 -158214004 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 594 214 148 22 chr5 41416229 41416411 -158213739 + MLT1J2 LTR MaLR 23 227 -223 1244 235 11 0 chr5 41416438 41416719 -158213431 - L1M4 LINE L1 -2448 3698 3415 559 289 31 44 chr5 41416738 41416982 -158213168 + MLT1J2 LTR MaLR 200 447 -3 315 301 64 45 chr5 41416986 41417142 -158213008 + L2 LINE L2 3114 3272 0 222 257 29 14 chr5 41417251 41417321 -158212829 + CT-rich Low_complexity Low_complexity 3 73 0 697 223 128 51 chr5 41417887 41418160 -158211990 + MLT1H LTR MaLR 256 549 0 334 219 0 55 chr5 41418226 41418299 -158211851 + MIR SINE MIR 8 76 -186 473 321 78 14 chr5 41418352 41418570 -158211580 - MIR SINE MIR -27 235 4 190 315 9 46 chr5 41420730 41420838 -158209312 - MIR SINE MIR -110 152 49 1148 241 101 21 chr5 41421054 41421184 -158208966 - LTR16C LTR ERVL 0 491 373 2069 184 31 6 chr5 41421184 41421537 -158208613 + MLT1A1 LTR MaLR 1 362 -3 1148 241 101 21 chr5 41421537 41421734 -158208416 - LTR16C LTR ERVL -118 373 138 244 207 72 81 chr5 41421824 41421935 -158208215 + MLT1L LTR MaLR 110 219 -396 1417 208 74 74 chr5 41422142 41422426 -158207724 - MLT1C LTR MaLR -4 463 177 2144 107 7 10 chr5 41422426 41422726 -158207424 - AluSx SINE Alu -13 299 1 1417 208 74 74 chr5 41422726 41422903 -158207247 - MLT1C LTR MaLR -289 178 2 782 271 104 54 chr5 41423177 41423494 -158206656 - L2 LINE L2 0 3313 2981 590 260 119 78 chr5 41424453 41424504 -158205646 - MLT1J LTR MaLR -28 483 436 1790 171 3 22 chr5 41424504 41424819 -158205331 - AluJb SINE Alu -1 311 3 590 260 119 78 chr5 41424819 41425152 -158204998 - MLT1J LTR MaLR -75 436 83 1824 61 52 0 chr5 41426211 41426441 -158203709 - AluY SINE Alu -4 307 66 197 254 63 48 chr5 41426450 41426513 -158203637 - L2 LINE L2 -2 3270 3207 187 294 65 22 chr5 41426628 41426720 -158203430 + MIR SINE MIR 62 157 -105 1994 123 0 20 chr5 41426927 41427228 -158202922 - AluSx SINE Alu -17 295 1 201 39 0 0 chr5 41427236 41427262 -158202888 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1014 111 14 0 chr5 41427263 41427407 -158202743 - AluSq SINE Alu -33 280 135 307 261 188 24 chr5 41427595 41427796 -158202354 - MIR SINE MIR -28 234 14 347 286 105 0 chr5 41428218 41428323 -158201827 + L2 LINE L2 3140 3255 -17 216 220 17 17 chr5 41429236 41429295 -158200855 - L2 LINE L2 -4 3309 3251 1074 90 159 0 chr5 41432029 41432262 -158197888 - MER7A DNA MER2_type -73 273 6 7402 106 26 4 chr5 41435755 41436873 -158193277 - Tigger1 DNA MER2_type -248 2170 1028 1733 161 68 0 chr5 41438565 41438932 -158191218 - MER57A LTR ERV1 -10 393 2 931 170 10 154 chr5 41438940 41439252 -158190898 - MER57A LTR ERV1 -131 272 6 2362 68 10 0 chr5 41440033 41440326 -158189824 - AluSp SINE Alu -4 309 14 1637 144 44 0 chr5 41440799 41441049 -158189101 + AluJo SINE Alu 24 284 -28 28 48 0 0 chr5 41441049 41441091 -158189059 + AT_rich Low_complexity Low_complexity 1 42 0 531 200 178 38 chr5 41442176 41442361 -158187789 + LOR1a LTR ERV1 233 443 -54 259 264 46 35 chr5 41442398 41442485 -158187665 - L2 LINE L2 -409 2904 2817 292 304 120 43 chr5 41443140 41443324 -158186826 + MIR SINE MIR 15 212 -50 598 253 165 65 chr5 41443469 41443732 -158186418 + LTR33A LTR ERVL 2 238 -285 2214 138 19 24 chr5 41443732 41444109 -158186041 + THE1C LTR MaLR 1 375 0 10360 121 47 23 chr5 41444109 41445478 -158184672 + THE1C-int LTR MaLR 1 1413 -167 1979 112 0 7 chr5 41445478 41445747 -158184403 - AluSq SINE Alu -14 299 33 10360 121 47 23 chr5 41445747 41445920 -158184230 + THE1C-int LTR MaLR 1413 1580 0 2231 129 27 22 chr5 41445922 41446293 -158183857 + THE1C LTR MaLR 3 375 0 598 253 165 65 chr5 41446293 41446499 -158183651 + LTR33A LTR ERVL 238 522 -1 207 0 0 0 chr5 41446574 41446597 -158183553 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4548 176 44 8 chr5 41446870 41448266 -158181884 + L1MB4 LINE L1 4730 6168 -12 476 186 17 5 chr5 41448266 41448873 -158181277 + (TA)n Simple_repeat Simple_repeat 1 614 0 232 255 0 0 chr5 41450026 41450073 -158180077 + L2 LINE L2 3213 3259 -13 572 269 90 63 chr5 41450393 41450694 -158179456 + MLT1L LTR MaLR 227 535 -80 185 263 12 0 chr5 41452027 41452054 -158178096 + (TA)n Simple_repeat Simple_repeat 1 26 -55 1913 144 61 0 chr5 41452054 41452381 -158177769 + MER7A DNA MER2_type 1 345 -1 185 263 12 0 chr5 41452381 41452433 -158177717 + (TA)n Simple_repeat Simple_repeat 26 81 0 270 240 48 19 chr5 41452469 41452573 -158177577 + L1ME LINE L1 5538 5644 -477 696 244 162 24 chr5 41452851 41453237 -158176913 + L1ME4a LINE L1 5597 6057 -64 1849 65 13 0 chr5 41453237 41453466 -158176684 - AluY SINE Alu 0 311 80 696 244 162 24 chr5 41453466 41453537 -158176613 + L1ME4a LINE L1 6057 6117 -4 426 219 119 53 chr5 41454151 41454302 -158175848 - MER5B DNA MER1_type -17 161 1 1951 59 0 59 chr5 41454822 41455121 -158175029 + AluY SINE Alu 29 311 0 725 298 34 21 chr5 41455377 41455615 -158174535 + MIR SINE MIR 22 262 0 217 318 79 60 chr5 41455685 41455937 -158174213 + L2 LINE L2 2830 3086 -186 182 309 36 0 chr5 41456127 41456182 -158173968 + L2 LINE L2 3207 3263 -9 229 217 17 17 chr5 41456391 41456451 -158173699 - MLT1K LTR MaLR -8 580 521 257 284 0 49 chr5 41456642 41456723 -158173427 - MER91C DNA MER1_type -33 107 31 219 226 57 0 chr5 41456992 41457045 -158173105 + (CATG)n Simple_repeat Simple_repeat 4 59 0 222 56 194 0 chr5 41457063 41457099 -158173051 - L2 LINE L2 -1 3271 3229 247 327 83 11 chr5 41457676 41457783 -158172367 + MIR SINE MIR 42 151 -81 * 257 273 0 0 chr5 41457778 41457833 -158172317 - L2 LINE L2 -15 3257 3203 203 219 55 41 chr5 41457845 41457918 -158172232 + MIR3 SINE MIR 122 195 -13 180 274 39 0 chr5 41457878 41457929 -158172221 + L2 LINE L2 2405 2457 -857 * 533 262 93 12 chr5 41458464 41458636 -158171514 + MIR SINE MIR 24 209 -53 247 263 131 0 chr5 41458735 41458834 -158171316 - MIR3 SINE MIR -6 202 91 235 260 26 13 chr5 41458975 41459052 -158171098 - MLT1L LTR MaLR -223 392 315 558 189 0 0 chr5 41459054 41459165 -158170985 + (TG)n Simple_repeat Simple_repeat 2 112 0 559 296 136 8 chr5 41459206 41459463 -158170687 - MLT1L LTR MaLR -325 290 1 199 305 34 0 chr5 41459706 41459765 -158170385 - L2 LINE L2 0 3313 3253 2414 97 0 6 chr5 41459858 41460169 -158169981 - AluSx SINE Alu -3 309 1 634 303 76 20 chr5 41460403 41460799 -158169351 + L1ME LINE L1 5265 5682 -439 22 35 0 0 chr5 41461364 41461393 -158168757 + AT_rich Low_complexity Low_complexity 1 29 0 745 268 31 18 chr5 41461550 41461778 -158168372 - MIR SINE MIR -4 258 28 183 211 35 18 chr5 41461769 41461826 -158168324 - MER5A DNA MER1_type -76 113 56 * 659 257 16 57 chr5 41461848 41462093 -158168057 - MIR SINE MIR -9 253 19 267 31 0 0 chr5 41462855 41462887 -158167263 + (CA)n Simple_repeat Simple_repeat 2 33 0 291 326 62 0 chr5 41463784 41463928 -158166222 - MIR SINE MIR -7 255 103 21 0 0 0 chr5 41465077 41465098 -158165052 + AT_rich Low_complexity Low_complexity 1 21 0 240 35 0 0 chr5 41465172 41465201 -158164949 + (TG)n Simple_repeat Simple_repeat 2 30 0 266 0 29 0 chr5 41465368 41465402 -158164748 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 1456 18 0 0 chr5 41465451 41465614 -158164536 + AluY SINE Alu 149 311 0 2383 71 3 0 chr5 41465738 41466033 -158164117 + AluSp SINE Alu 14 309 -4 866 168 3 158 chr5 41466821 41467137 -158163013 + MER57A LTR ERV1 6 272 -131 2328 156 3 0 chr5 41467145 41467537 -158162613 + MER57A LTR ERV1 2 394 -9 256 129 145 16 chr5 41467589 41467651 -158162499 + LTR54 LTR ERV1 432 501 -9 228 67 0 0 chr5 41468139 41468169 -158161981 + (CA)n Simple_repeat Simple_repeat 2 31 0 4385 109 3 3 chr5 41469195 41469830 -158160320 - MER41B LTR ERV1 0 635 1 230 191 0 32 chr5 41470113 41470176 -158159974 + GA-rich Low_complexity Low_complexity 4 64 0 237 371 48 0 chr5 41470212 41470317 -158159833 + MIR3 SINE MIR 60 169 -39 2325 112 0 6 chr5 41471211 41471525 -158158625 - AluSx SINE Alu 0 312 1 1681 150 36 4 chr5 41472330 41472583 -158157567 + AluJo SINE Alu 24 284 -28 28 48 0 0 chr5 41472583 41472625 -158157525 + AT_rich Low_complexity Low_complexity 1 42 0 211 369 86 20 chr5 41472860 41473058 -158157092 + L2 LINE L2 2902 3112 -160 212 246 35 0 chr5 41475344 41475401 -158154749 + (TATG)n Simple_repeat Simple_repeat 2 60 0 266 274 149 2 chr5 41475416 41475550 -158154600 - MIR3 SINE MIR -47 161 45 430 340 155 9 chr5 41476017 41476346 -158153804 - L2 LINE L2 -609 2705 2329 225 132 15 29 chr5 41477639 41477707 -158152443 + T-rich Low_complexity Low_complexity 5 71 0 280 235 38 30 chr5 41477726 41477858 -158152292 + T-rich Low_complexity Low_complexity 3 135 0 207 0 0 0 chr5 41477976 41477999 -158152151 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 527 241 95 68 chr5 41478290 41478700 -158151450 + HAL1b LINE L1 150 570 -778 280 148 66 0 chr5 41478706 41478777 -158151373 + L1MA9 LINE L1 6241 6333 -1 5510 229 95 18 chr5 41479084 41480847 -158149303 - L1ME2 LINE L1 -20 6144 4081 2194 97 3 26 chr5 41480847 41481156 -158148994 - AluSg SINE Alu -8 302 1 5510 229 95 18 chr5 41481156 41482219 -158147931 - L1ME2 LINE L1 -2083 4081 3100 205 221 156 66 chr5 41482265 41482387 -158147763 - L2 LINE L2 -1300 2014 1882 256 313 0 0 chr5 41482591 41482671 -158147479 + LTR67 LTR ERVL 102 181 -376 490 318 83 14 chr5 41482705 41482994 -158147156 + LTR67 LTR ERVL 244 552 -5 323 280 107 40 chr5 41482994 41483144 -158147006 + MIR SINE MIR 54 213 -49 180 0 0 0 chr5 41483698 41483718 -158146432 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr5 41483841 41483862 -158146288 + AT_rich Low_complexity Low_complexity 1 21 0 14440 127 14 38 chr5 41486604 41489083 -158141067 - Tigger1 DNA MER2_type 0 2418 1 581 331 39 11 chr5 41489795 41490055 -158140095 - MLT1L LTR MaLR -91 524 258 1605 218 86 31 chr5 41490249 41490759 -158139391 - MLT1H LTR MaLR -4 545 8 555 211 34 34 chr5 41490790 41490937 -158139213 + MIR SINE MIR 78 224 -38 2196 117 0 13 chr5 41491031 41491330 -158138820 + AluSx SINE Alu 1 295 -17 991 177 0 0 chr5 41491937 41492101 -158138049 + Tigger3(Golem) DNA MER2_type 2863 3026 -3 232 226 32 0 chr5 41492388 41492450 -158137700 + (CATATA)n Simple_repeat Simple_repeat 1 64 0 5625 30 1 0 chr5 41492502 41493160 -158136990 - L1PA4 LINE L1 -4 6151 5493 561 262 21 0 chr5 41493466 41493607 -158136543 + MIR SINE MIR 11 154 -108 481 295 92 12 chr5 41494076 41494249 -158135901 - MER91A DNA MER1_type -7 189 3 490 236 134 4 chr5 41494401 41494716 -158135434 + LTR16B LTR ERVL 11 388 -76 260 186 0 0 chr5 41494893 41494936 -158135214 - 5S rRNA rRNA -78 43 1 23 0 0 0 chr5 41495538 41495561 -158134589 + AT_rich Low_complexity Low_complexity 1 23 0 806 172 0 16 chr5 41495567 41495695 -158134455 + AluJb SINE Alu 1 126 -186 24 96 0 0 chr5 41495695 41495768 -158134382 + AT_rich Low_complexity Low_complexity 1 73 0 2313 179 58 32 chr5 41495777 41496222 -158133928 + MER74A LTR ERVL 14 477 -81 2388 96 3 0 chr5 41496222 41496523 -158133627 - AluSq SINE Alu -11 302 1 2313 179 58 32 chr5 41496523 41496608 -158133542 + MER74A LTR ERVL 477 558 0 280 274 0 105 chr5 41496944 41497068 -158133082 - MIR SINE MIR -32 230 120 252 250 118 0 chr5 41497086 41497154 -158132996 - MIR3 SINE MIR -11 197 122 840 189 4 0 chr5 41499131 41499366 -158130784 + (TG)n Simple_repeat Simple_repeat 1 236 0 21 0 0 0 chr5 41499535 41499556 -158130594 + AT_rich Low_complexity Low_complexity 1 21 0 257 311 227 20 chr5 41499652 41499903 -158130247 + L3b LINE CR1 1157 1459 -124 261 250 110 10 chr5 41499989 41500089 -158130061 - L1ME4a LINE L1 -1 6120 6011 21 57 0 0 chr5 41500641 41500676 -158129474 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr5 41500749 41500778 -158129372 + AT_rich Low_complexity Low_complexity 1 29 0 470 303 85 71 chr5 41501676 41502208 -158127942 - MLT1K LTR MaLR 0 588 50 437 301 79 15 chr5 41502349 41502615 -158127535 - L1ME4a LINE L1 -345 5776 5494 1869 167 3 7 chr5 41502728 41503028 -158127122 - AluJb SINE Alu -13 299 1 327 200 0 90 chr5 41503530 41503630 -158126520 + MIR SINE MIR 117 207 -55 6201 87 27 0 chr5 41503652 41504296 -158125854 + L1PA13 LINE L1 4132 4757 -1406 2144 118 3 0 chr5 41504296 41504593 -158125557 + AluSg SINE Alu 1 298 -12 6201 87 27 0 chr5 41504593 41506004 -158124146 + L1PA13 LINE L1 4757 6161 -2 692 187 43 7 chr5 41506378 41506517 -158123633 + MIR SINE MIR 46 189 -73 396 0 0 0 chr5 41506517 41506561 -158123589 + (TA)n Simple_repeat Simple_repeat 1 44 0 261 233 50 0 chr5 41506765 41506825 -158123325 + L2 LINE L2 3251 3313 0 25 31 0 0 chr5 41506913 41506945 -158123205 + AT_rich Low_complexity Low_complexity 1 32 0 216 97 0 0 chr5 41507312 41507343 -158122807 + (GAA)n Simple_repeat Simple_repeat 2 32 0 467 306 120 61 chr5 41508419 41509126 -158121024 - L2 LINE L2 -33 3280 2521 351 0 0 0 chr5 41510179 41510218 -158119932 + (CA)n Simple_repeat Simple_repeat 1 39 0 244 241 88 44 chr5 41510219 41510356 -158119794 + L1ME2 LINE L1 1385 1527 -5332 588 318 35 21 chr5 41510359 41510645 -158119505 + L1ME2 LINE L1 1655 1944 -5003 973 244 7 3 chr5 41510654 41510949 -158119201 + L1ME2 LINE L1 3578 3873 -3084 * 2841 226 89 20 chr5 41510941 41511114 -158119036 + L1ME2 LINE L1 4972 5132 -1843 653 216 8 0 chr5 41511114 41511239 -158118911 - FLAM_C SINE Alu -7 126 1 2841 226 89 20 chr5 41511239 41512879 -158117271 + L1ME2 LINE L1 5132 6966 -9 742 107 0 41 chr5 41513287 41513408 -158116742 + FLAM_C SINE Alu 23 138 -5 300 244 161 36 chr5 41513418 41513591 -158116559 + MIR SINE MIR 58 253 -9 301 319 140 32 chr5 41514204 41514483 -158115667 - L3 LINE CR1 -7 1570 1262 180 307 114 64 chr5 41514584 41514724 -158115426 + L2 LINE L2 3102 3248 -24 2219 246 89 26 chr5 41514811 41515528 -158114622 - MER21B LTR ERV1 -60 803 42 334 254 0 0 chr5 41515530 41515601 -158114549 - MER21B LTR ERV1 -774 89 19 277 226 54 32 chr5 41515599 41515692 -158114458 - MER21B LTR ERV1 -757 106 12 * 930 183 204 21 chr5 41515903 41516187 -158113963 - MER2 DNA MER2_type 0 345 10 569 296 139 7 chr5 41516339 41516619 -158113531 - L3 LINE CR1 -382 1195 879 279 257 138 18 chr5 41516889 41516998 -158113152 - MER5A DNA MER1_type -66 123 2 395 242 10 0 chr5 41517104 41517203 -158112947 - MER58 DNA MER1_type -3 2417 2318 1417 206 94 28 chr5 41517222 41517658 -158112492 + MLT1C LTR MaLR 1 465 -2 278 164 0 60 chr5 41517660 41517727 -158112423 - MER58 DNA MER1_type -244 97 35 222 299 206 10 chr5 41517841 41518035 -158112115 + L2 LINE L2 3080 3311 -2 411 304 76 23 chr5 41518064 41518235 -158111915 - MIR3 SINE MIR -26 182 3 1808 216 102 18 chr5 41518686 41519255 -158110895 - MLT1E3 LTR MaLR -7 617 1 226 303 33 16 chr5 41519400 41519522 -158110628 + LTR67 LTR ERVL 429 552 -5 187 369 15 0 chr5 41520837 41520902 -158109248 + MIR SINE MIR 8 73 -189 512 256 72 31 chr5 41520902 41521097 -158109053 - MLT1J2 LTR MaLR 0 450 248 646 150 14 68 chr5 41521139 41521286 -158108864 - MLT1J2 LTR MaLR -305 145 7 181 292 108 0 chr5 41521287 41521352 -158108798 + MIR SINE MIR 66 137 -125 1963 182 43 0 chr5 41521358 41521393 -158108757 - MLT2D LTR ERVL -8 406 374 393 22 0 0 chr5 41521393 41521439 -158108711 + (TG)n Simple_repeat Simple_repeat 1 46 0 1963 182 43 0 chr5 41521439 41521776 -158108374 - MLT2D LTR ERVL -40 374 18 282 265 15 0 chr5 41521797 41521865 -158108285 + MIR SINE MIR 188 256 -6 255 259 54 54 chr5 41522016 41522128 -158108022 - MIR SINE MIR -43 219 108 25 0 0 0 chr5 41522392 41522417 -158107733 + AT_rich Low_complexity Low_complexity 1 25 0 356 294 123 25 chr5 41522636 41522799 -158107351 + MIR3 SINE MIR 13 191 -17 183 286 0 20 chr5 41523695 41523744 -158106406 + MIR SINE MIR 74 121 -87 318 188 129 35 chr5 41523874 41523959 -158106191 - MIR SINE MIR -71 191 99 1639 169 47 51 chr5 41523959 41524351 -158105799 + MLT1B LTR MaLR 1 593 0 387 259 37 44 chr5 41524471 41524606 -158105544 + MER5B DNA MER1_type 26 159 -19 1986 240 53 35 chr5 41525441 41526079 -158104071 - L1ME3 LINE L1 -29 6133 5484 191 212 88 0 chr5 41526531 41526579 -158103571 + MIR SINE MIR 93 146 -116 482 347 61 66 chr5 41526606 41527171 -158102979 - L2 LINE L2 -19 3253 2694 256 258 21 21 chr5 41527208 41527305 -158102845 + A-rich Low_complexity Low_complexity 2 98 0 555 274 107 0 chr5 41527330 41527722 -158102428 + L1ME3A LINE L1 5045 5481 -683 1245 225 138 0 chr5 41527737 41528093 -158102057 + L1ME3A LINE L1 5591 5995 -175 263 261 14 0 chr5 41529044 41529106 -158101044 + MER112 DNA MER1_type 9 71 -189 421 179 199 13 chr5 41529106 41529257 -158100893 - MER104 DNA Tc2 -1 179 1 375 260 0 29 chr5 41529335 41529439 -158100711 + MER112 DNA MER1_type 154 254 -6 619 314 69 0 chr5 41530441 41530616 -158099534 + MER91A DNA MER1_type 1 187 -9 409 291 174 48 chr5 41531420 41531839 -158098311 + L2 LINE L2 2842 3313 0 330 257 10 30 chr5 41531884 41531985 -158098165 + MER94 DNA DNA 2 100 -34 380 281 115 31 chr5 41532539 41532731 -158097419 + MIR SINE MIR 46 253 -9 270 0 0 0 chr5 41532803 41532833 -158097317 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1697 171 3 14 chr5 41532835 41533121 -158097029 - AluJo SINE Alu -24 288 6 793 286 74 0 chr5 41533132 41533349 -158096801 + MIR SINE MIR 3 235 -27 1220 178 156 58 chr5 41533788 41534204 -158095946 - MSTB2 LTR MaLR 0 457 1 495 140 0 11 chr5 41535190 41535283 -158094867 + MER53 DNA DNA 92 183 -6 194 313 15 0 chr5 41535289 41535356 -158094794 - MIR SINE MIR -112 96 29 546 234 6 91 chr5 41535561 41535617 -158094533 - MER5B DNA MER1_type -1 177 118 2154 120 0 7 chr5 41535617 41535909 -158094241 + AluSx SINE Alu 10 299 -13 546 234 6 91 chr5 41535909 41536027 -158094123 - MER5B DNA MER1_type -60 118 18 189 0 0 0 chr5 41536117 41536138 -158094012 + (TG)n Simple_repeat Simple_repeat 2 22 0 439 280 118 32 chr5 41538923 41539227 -158090923 + L1MC4a LINE L1 5318 5395 -726 330 45 0 0 chr5 41539227 41539271 -158090879 + (CA)n Simple_repeat Simple_repeat 2 45 0 439 280 118 32 chr5 41539271 41539492 -158090658 + L1MC4a LINE L1 5395 5595 -526 2003 160 0 13 chr5 41542729 41543066 -158087084 - AluJo SINE Alu 0 334 2 410 213 193 66 chr5 41543130 41543327 -158086823 - MIR SINE MIR -28 234 13 192 287 138 11 chr5 41543420 41543514 -158086636 - L2 LINE L2 0 3313 3208 198 194 0 0 chr5 41543735 41543771 -158086379 - MIR3 SINE MIR -11 197 162 250 206 128 20 chr5 41544460 41544562 -158085588 - L1MC4 LINE L1 0 8042 7930 398 157 0 33 chr5 41544733 41544854 -158085296 + (TA)n Simple_repeat Simple_repeat 2 118 0 180 111 0 0 chr5 41544938 41544965 -158085185 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 378 57 0 0 chr5 41544986 41545039 -158085111 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 1885 144 0 7 chr5 41545048 41545332 -158084818 - AluSx SINE Alu -30 282 1 473 272 40 13 chr5 41545360 41545584 -158084566 - L1ME2 LINE L1 -209 5955 5726 593 286 30 15 chr5 41545593 41545859 -158084291 - L1ME4a LINE L1 -184 5937 5668 379 263 124 29 chr5 41545904 41546041 -158084109 + MIR SINE MIR 7 156 -106 200 276 40 13 chr5 41546173 41546249 -158083901 + MIR SINE MIR 179 256 -6 248 250 0 11 chr5 41546251 41546343 -158083807 + (CA)n Simple_repeat Simple_repeat 2 92 0 263 26 51 0 chr5 41548098 41548137 -158082013 + (CGGAA)n Simple_repeat Simple_repeat 5 45 0 219 114 0 0 chr5 41548139 41548174 -158081976 + (GGGA)n Simple_repeat Simple_repeat 3 37 0 195 0 39 0 chr5 41548426 41548452 -158081698 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 1931 96 4 0 chr5 41548452 41548703 -158081447 - AluSx SINE Alu -28 284 33 290 274 115 18 chr5 41548874 41548987 -158081163 + MIR SINE MIR 19 142 -66 2196 116 0 0 chr5 41549704 41549998 -158080152 + AluSq SINE Alu 1 294 -19 228 312 64 46 chr5 41552960 41553069 -158077081 - L2 LINE L2 -12 3260 3150 421 264 8 40 chr5 41553120 41553245 -158076905 + MLT1L LTR MaLR 18 138 -477 2029 134 10 10 chr5 41553245 41553552 -158076598 - AluSx SINE Alu -5 307 1 796 84 19 0 chr5 41553567 41553674 -158076476 - AluY SINE Alu -2 309 201 410 307 40 27 chr5 41553676 41553826 -158076324 - MER5B DNA MER1_type -11 167 16 1045 276 66 39 chr5 41553832 41554190 -158075960 + MLT1L LTR MaLR 136 483 -132 736 253 6 6 chr5 41554190 41554368 -158075782 - MER5B DNA MER1_type 0 178 1 1045 276 66 39 chr5 41554368 41554416 -158075734 + MLT1L LTR MaLR 483 528 -87 899 238 5 5 chr5 41554416 41554605 -158075545 + MER5A DNA MER1_type 1 189 0 1045 276 66 39 chr5 41554605 41554664 -158075486 + MLT1L LTR MaLR 528 615 0 264 229 0 0 chr5 41555986 41556047 -158074103 - L1ME2 LINE L1 -10 6154 6094 22 0 0 0 chr5 41556062 41556084 -158074066 + AT_rich Low_complexity Low_complexity 1 22 0 186 279 0 0 chr5 41556692 41556735 -158073415 - MIR3 SINE MIR -48 160 118 294 95 0 0 chr5 41557353 41557395 -158072755 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 666 87 0 0 chr5 41558553 41558645 -158071505 + AluSc SINE Alu 218 309 0 627 281 54 50 chr5 41560013 41560255 -158069895 + MIR SINE MIR 20 262 0 201 129 0 0 chr5 41560292 41560323 -158069827 + (CA)n Simple_repeat Simple_repeat 1 31 0 1832 153 7 0 chr5 41560376 41560657 -158069493 + AluSx SINE Alu 1 283 -29 205 274 20 0 chr5 41560724 41560775 -158069375 - L2 LINE L2 -10 3262 3211 208 127 36 0 chr5 41561997 41562052 -158068098 + (CA)n Simple_repeat Simple_repeat 2 58 0 2973 85 8 8 chr5 41562097 41562472 -158067678 + THE1C LTR MaLR 1 375 0 358 245 118 10 chr5 41562510 41562612 -158067538 - L2 LINE L2 0 3272 3160 449 231 52 58 chr5 41562766 41562842 -158067308 - MIR SINE MIR -12 250 175 192 40 0 0 chr5 41562842 41562867 -158067283 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2271 106 0 0 chr5 41562869 41563162 -158066988 - AluSc SINE Alu -16 293 1 449 231 52 58 chr5 41563162 41563255 -158066895 - MIR SINE MIR -88 174 79 4422 116 65 9 chr5 41563431 41563783 -158066367 + L1PB1 LINE L1 5430 5761 -390 207 0 0 0 chr5 41563783 41563806 -158066344 + (TA)n Simple_repeat Simple_repeat 2 24 0 4422 116 65 9 chr5 41563806 41564134 -158066016 + L1PB1 LINE L1 5761 6148 -3 180 0 0 0 chr5 41565125 41565145 -158065005 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1111 255 61 21 chr5 41566021 41566347 -158063803 + L1ME4a LINE L1 5528 5866 -255 268 325 130 0 chr5 41568117 41568240 -158061910 + L2 LINE L2 3171 3309 -4 372 284 55 2 chr5 41569337 41569449 -158060701 - MIR SINE MIR -87 121 2 1719 190 46 9 chr5 41569603 41569930 -158060220 - MER58B DNA MER1_type 0 341 3 2208 127 3 0 chr5 41570621 41570921 -158059229 - AluSx SINE Alu -9 303 3 358 267 8 53 chr5 41572173 41572304 -158057846 + L2 LINE L2 2935 3059 -213 245 327 45 0 chr5 41572825 41572935 -158057215 + LTR16A1 LTR ERVL 179 293 -164 267 242 16 0 chr5 41572936 41572998 -158057152 - MIR SINE MIR -160 102 40 634 311 40 13 chr5 41573203 41573428 -158056722 + MIR SINE MIR 20 250 -12 984 247 57 4 chr5 41575733 41575960 -158054190 - LTR16A LTR ERVL 0 450 212 222 317 164 0 chr5 41576071 41576175 -158053975 - L2 LINE L2 -11 3302 3182 299 250 16 0 chr5 41576764 41576828 -158053322 + LTR67 LTR ERVL 491 555 -2 303 292 90 35 chr5 41576834 41576978 -158053172 - MIR SINE MIR -87 175 24 233 291 27 36 chr5 41578924 41579034 -158051116 - L1ME4a LINE L1 -12 6109 6001 480 347 144 21 chr5 41579065 41579525 -158050625 - L2 LINE L2 -62 3210 2695 571 199 23 0 chr5 41579587 41579758 -158050392 + GA-rich Low_complexity Low_complexity 3 177 0 213 39 0 0 chr5 41580557 41580583 -158049567 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 315 304 36 14 chr5 41580719 41580857 -158049293 + MER112 DNA MER1_type 38 178 -82 2631 164 118 23 chr5 41580879 41581445 -158048705 + L1ME3A LINE L1 5550 6169 -1 263 257 40 14 chr5 41581445 41581519 -158048631 + MER112 DNA MER1_type 178 253 -7 21 0 0 0 chr5 41581565 41581586 -158048564 + AT_rich Low_complexity Low_complexity 1 21 0 2419 99 0 0 chr5 41633650 41633954 -157996196 - AluSq SINE Alu -9 304 1 464 139 7 115 chr5 41633954 41633978 -157996172 - L1 LINE L1 -853 5293 5268 2114 188 11 3 chr5 41633978 41634340 -157995810 - MLT1A1 LTR MaLR 0 365 1 464 139 7 115 chr5 41634340 41634452 -157995698 - L1 LINE L1 -878 5268 5155 231 279 41 68 chr5 41634534 41634608 -157995542 + L1ME LINE L1 5547 5617 -504 972 206 38 5 chr5 41634608 41634817 -157995333 + MER20 DNA MER1_type 1 216 -3 231 279 41 68 chr5 41634817 41634889 -157995261 + L1ME LINE L1 5617 5689 -432 273 338 15 0 chr5 41634956 41635089 -157995061 + L1ME LINE L1 5636 5770 -351 234 240 208 10 chr5 41635682 41635778 -157994372 - L2 LINE L2 -1 3312 3198 1020 136 180 26 chr5 41636281 41636509 -157993641 - MSTA LTR MaLR -165 263 1 381 289 60 85 chr5 41636529 41636882 -157993268 - L1ME LINE L1 -457 5664 5321 29 0 0 0 chr5 41637039 41637068 -157993082 + AT_rich Low_complexity Low_complexity 1 29 0 1566 177 11 14 chr5 41637117 41637443 -157992707 + AluJo SINE Alu 4 328 0 209 282 9 55 chr5 41637611 41637721 -157992429 + L2 LINE L2 2393 2497 -817 241 200 33 17 chr5 41638671 41638731 -157991419 + LTR33A LTR ERVL 463 523 0 798 267 0 31 chr5 41640029 41640254 -157989896 + MER58A DNA MER1_type 4 221 -3 479 273 139 6 chr5 41640859 41641024 -157989126 + MIR3 SINE MIR 16 202 -6 263 174 0 0 chr5 41641058 41641104 -157989046 + MIR SINE MIR 217 262 0 1331 164 76 40 chr5 41641424 41641674 -157988476 + AluJb SINE Alu 1 259 -53 478 206 147 18 chr5 41642263 41642433 -157987717 + LTR16C LTR ERVL 298 489 -2 2256 105 0 3 chr5 41642721 41643015 -157987135 - AluSx SINE Alu -19 293 1 967 296 82 30 chr5 41643324 41643786 -157986364 + MLT1K LTR MaLR 33 518 -70 2337 136 68 2 chr5 41644135 41644532 -157985618 - L1MC1 LINE L1 -66 6267 5845 3430 120 21 11 chr5 41644722 41645279 -157984871 - L1MC1 LINE L1 -489 5844 5282 * 6426 80 5 12 chr5 41645262 41645447 -157984703 - L1PA14 LINE L1 0 6161 5976 3529 118 8 4 chr5 41645447 41645956 -157984194 - MER9 LTR ERVK 0 511 1 6426 80 5 12 chr5 41645956 41646654 -157983496 - L1PA14 LINE L1 -185 5976 5285 2296 65 0 4 chr5 41646935 41647214 -157982936 + AluY SINE Alu 1 278 -33 357 43 0 0 chr5 41647214 41647261 -157982889 + (CA)n Simple_repeat Simple_repeat 2 48 0 1001 136 101 0 chr5 41647261 41647430 -157982720 + MER46A DNA MER2_type 2 187 -49 195 100 0 0 chr5 41647459 41647489 -157982661 + (CA)n Simple_repeat Simple_repeat 2 31 0 365 267 167 64 chr5 41648744 41649055 -157981095 + Charlie8 DNA MER1_type 55 397 -2020 538 329 102 5 chr5 41650341 41650557 -157979593 - MIR SINE MIR -6 256 20 311 272 115 30 chr5 41650986 41651139 -157979011 + MIR SINE MIR 31 191 -41 207 69 0 0 chr5 41651613 41651642 -157978508 + (TG)n Simple_repeat Simple_repeat 2 30 0 182 206 0 0 chr5 41651818 41651852 -157978298 + MIR SINE MIR 98 131 -131 426 270 0 0 chr5 41651877 41651966 -157978184 + MER119 DNA MER1_type 5 93 -490 2398 109 62 14 chr5 41651986 41652344 -157977806 - THE1C LTR MaLR 0 375 1 636 205 16 0 chr5 41652351 41652478 -157977672 + MER119 DNA MER1_type 454 582 -1 383 243 48 95 chr5 41654002 41654219 -157975931 + MIR SINE MIR 33 245 -17 1890 166 0 0 chr5 41654229 41654531 -157975619 - AluJb SINE Alu -10 302 1 730 279 125 18 chr5 41656296 41656576 -157973574 - MLT1I LTR MaLR 0 409 100 464 223 93 7 chr5 41656842 41656981 -157973169 - MIR SINE MIR -3 259 109 262 246 0 18 chr5 41656981 41657038 -157973112 - LTR16C LTR ERVL 0 491 436 475 279 92 26 chr5 41657081 41657310 -157972840 - LTR16C LTR ERVL -150 341 98 425 19 19 0 chr5 41657716 41657770 -157972380 + AluY SINE Alu 2 56 -254 649 128 99 41 chr5 41658422 41658594 -157971556 - Charlie7 DNA MER1_type -2 2610 2429 312 257 59 20 chr5 41658576 41658677 -157971473 - Charlie7 DNA MER1_type -2507 105 1 * 290 277 126 17 chr5 41658694 41658813 -157971337 + MIR SINE MIR 19 150 -58 2443 82 0 7 chr5 41658815 41659120 -157971030 + AluSq SINE Alu 1 303 -10 325 299 0 0 chr5 41659179 41659275 -157970875 + MER20B DNA MER1_type 103 202 -17 340 208 125 21 chr5 41659569 41659665 -157970485 - MIR SINE MIR -80 128 23 2344 101 10 0 chr5 41659898 41660196 -157969954 + AluSq SINE Alu 2 302 -11 1031 274 132 8 chr5 41660292 41660679 -157969471 - MLT1J LTR MaLR -38 473 39 418 210 50 0 chr5 41660872 41660972 -157969178 + MIR SINE MIR 93 197 -65 470 335 52 6 chr5 41662051 41662224 -157967926 + MIR SINE MIR 21 201 -61 2259 40 20 20 chr5 41662804 41663102 -157967048 + AluY SINE Alu 3 300 -11 183 289 0 0 chr5 41663186 41663224 -157966926 + L2 LINE L2 3149 3186 -86 325 284 33 93 chr5 41665243 41665426 -157964724 + MIR SINE MIR 32 203 -59 316 272 0 96 chr5 41666023 41666148 -157964002 - MLT1H LTR MaLR -10 539 427 240 306 0 0 chr5 41666411 41666473 -157963677 - MLT1I LTR MaLR -290 119 58 2080 106 3 30 chr5 41666850 41667152 -157962998 - AluSp SINE Alu -19 294 1 24 32 0 0 chr5 41667428 41667459 -157962691 + AT_rich Low_complexity Low_complexity 1 31 0 204 40 0 0 chr5 41668331 41668356 -157961794 + (ATG)n Simple_repeat Simple_repeat 2 26 0 208 309 37 25 chr5 41668362 41668443 -157961707 - MIR SINE MIR -161 101 20 3030 202 119 27 chr5 41668502 41669340 -157960810 + L1MD3 LINE L1 7081 7995 0 578 268 15 82 chr5 41670685 41670737 -157959413 - MIR SINE MIR 0 262 208 1670 146 62 0 chr5 41670737 41670997 -157959153 - AluJb SINE Alu -3 309 34 578 268 15 82 chr5 41670997 41671213 -157958937 - MIR SINE MIR -54 208 12 1079 125 9 0 chr5 41671468 41671641 -157958509 + MSTB LTR MaLR 5 197 -260 682 192 26 64 chr5 41671721 41671877 -157958273 + MSTB LTR MaLR 149 298 -128 2478 228 178 63 chr5 41671887 41672421 -157957729 - L2 LINE L2 -4 3309 2838 2152 120 3 7 chr5 41672421 41672720 -157957430 - AluSx SINE Alu -14 298 1 2478 228 178 63 chr5 41672720 41673652 -157956498 - L2 LINE L2 -475 2838 1671 2108 128 10 0 chr5 41674004 41674301 -157955849 + AluSx SINE Alu 1 300 -12 531 293 63 11 chr5 41674386 41674560 -157955590 + MIR SINE MIR 24 206 -56 2055 115 37 7 chr5 41676011 41676307 -157953843 + AluSq SINE Alu 6 310 -3 2331 258 117 36 chr5 41676309 41677283 -157952867 + HAL1 LINE L1 210 1262 -1245 460 248 62 25 chr5 41677551 41677712 -157952438 + MIR SINE MIR 21 187 -75 258 32 0 0 chr5 41677909 41677940 -157952210 + (TG)n Simple_repeat Simple_repeat 2 32 0 183 184 0 0 chr5 41680003 41680041 -157950109 + (TG)n Simple_repeat Simple_repeat 2 39 0 209 287 64 64 chr5 41680984 41681078 -157949072 + L2 LINE L2 2960 3053 -219 741 234 5 31 chr5 41681638 41681830 -157948320 - L2 LINE L2 0 3313 3127 275 233 27 14 chr5 41681893 41681966 -157948184 - L2 LINE L2 -348 2924 2851 231 149 15 104 chr5 41682037 41682104 -157948046 - L2 LINE L2 -4 3268 3208 44106 32 21 1 chr5 41682206 41688240 -157941910 - L1PA3 LINE L1 0 6155 1 350 21 21 0 chr5 41688399 41688446 -157941704 + (TG)n Simple_repeat Simple_repeat 1 48 0 547 302 25 20 chr5 41689039 41689241 -157940909 - L3 LINE CR1 -125 1452 1250 2208 119 3 0 chr5 41689299 41689602 -157940548 + AluSx SINE Alu 1 304 -8 29 0 0 0 chr5 41689602 41689631 -157940519 + AT_rich Low_complexity Low_complexity 1 29 0 2066 89 65 14 chr5 41689800 41690093 -157940057 - AluSx SINE Alu -4 308 1 1011 173 6 18 chr5 41690108 41690276 -157939874 - FRAM SINE Alu 0 166 1 336 296 179 6 chr5 41691579 41691741 -157938409 + MIR SINE MIR 26 215 -47 453 257 45 34 chr5 41693238 41693411 -157936739 + MIR SINE MIR 20 190 -62 201 297 31 0 chr5 41693903 41693967 -157936183 - L2 LINE L2 -213 3059 2994 1224 188 131 25 chr5 41693967 41694275 -157935875 + MLT1A1 LTR MaLR 1 374 0 2015 49 4 8 chr5 41694298 41694542 -157935608 + L1PA7 LINE L1 5910 6152 -2 609 244 64 17 chr5 41695235 41695407 -157934743 + MIR3 SINE MIR 1 180 -28 214 337 12 47 chr5 41695426 41695512 -157934638 + L3b LINE CR1 1370 1452 -131 654 317 31 9 chr5 41695566 41695790 -157934360 - MIR SINE MIR -30 232 4 679 257 0 0 chr5 41696083 41696227 -157933923 - MIR SINE MIR -10 252 109 279 0 0 0 chr5 41696782 41696813 -157933337 + (TG)n Simple_repeat Simple_repeat 2 32 0 595 271 82 67 chr5 41697910 41698446 -157931704 + L1MD3 LINE L1 5324 5866 -300 22 56 0 0 chr5 41698733 41698769 -157931381 + AT_rich Low_complexity Low_complexity 1 36 0 311 167 17 0 chr5 41698775 41698835 -157931315 - MIR3 SINE MIR -11 197 137 3510 189 11 29 chr5 41698862 41699624 -157930526 + L1MB1 LINE L1 3295 4042 -2104 3307 181 22 40 chr5 41699626 41699895 -157930255 + L1MB1 LINE L1 5264 5536 -632 342 109 18 0 chr5 41699895 41699950 -157930200 + HSMAR2 DNA Mariner 647 702 -600 3307 181 22 40 chr5 41699950 41700573 -157929577 + L1MB1 LINE L1 5536 6163 -5 197 340 10 19 chr5 41702436 41702539 -157927611 + MER5A DNA MER1_type 88 189 0 417 237 40 40 chr5 41703101 41703253 -157926897 + MIR SINE MIR 35 186 -76 2270 125 0 0 chr5 41703756 41704061 -157926089 + AluSx SINE Alu 1 305 -7 376 277 90 6 chr5 41704329 41704520 -157925630 + MIR SINE MIR 3 206 -56 256 188 0 87 chr5 41704565 41704634 -157925516 - MLT1I LTR MaLR 0 409 347 551 216 18 0 chr5 41704765 41704876 -157925274 - MLT1I LTR MaLR -270 139 27 914 235 5 5 chr5 41705661 41705874 -157924276 - MIR SINE MIR -26 236 24 1378 139 118 113 chr5 41706823 41707248 -157922902 - MSTA LTR MaLR -1 427 1 206 328 30 50 chr5 41707603 41707801 -157922349 + L2 LINE L2 2163 2356 -958 305 302 161 10 chr5 41708031 41708223 -157921927 + MIR SINE MIR 36 256 -6 307 336 26 17 chr5 41708312 41708428 -157921722 - L2 LINE L2 -13 3259 3143 186 376 46 0 chr5 41708433 41708542 -157921608 + L2 LINE L2 2648 2761 -553 399 195 41 81 chr5 41708900 41709023 -157921127 - LTR33 LTR ERVL -27 494 377 1992 145 3 10 chr5 41709152 41709449 -157920701 + AluSx SINE Alu 1 295 -17 431 293 212 20 chr5 41711289 41711632 -157918518 + ERVL LTR ERVL 1893 2273 -3381 2473 74 3 0 chr5 41711713 41712023 -157918127 + AluY SINE Alu 1 311 0 326 221 0 0 chr5 41712054 41712122 -157918028 + MIR SINE MIR 137 204 -58 387 303 69 29 chr5 41712287 41712462 -157917688 + ERVL LTR ERVL 2847 3028 -2736 804 308 54 7 chr5 41712596 41712872 -157917278 + ERVL LTR ERVL 3191 3479 -2285 1251 296 101 24 chr5 41712888 41713510 -157916640 + ERVL LTR ERVL 3396 4065 -1699 452 317 60 53 chr5 41713590 41713871 -157916279 + ERVL LTR ERVL 4305 4587 -1177 845 224 130 27 chr5 41713957 41714180 -157915970 + MLT1I LTR MaLR 99 344 -65 470 194 14 22 chr5 41714224 41714363 -157915787 + CT-rich Low_complexity Low_complexity 1 138 0 397 272 78 32 chr5 41714634 41714851 -157915299 + LTR33A LTR ERVL 297 523 0 221 217 33 17 chr5 41715451 41715511 -157914639 - MIR SINE MIR -174 88 28 588 297 35 0 chr5 41716568 41716770 -157913380 - MIR SINE MIR 0 262 54 7788 146 13 21 chr5 41717889 41718752 -157911398 + HSMAR2 DNA Mariner 1 851 -451 1829 109 31 4 chr5 41718752 41719008 -157911142 + AluSc SINE Alu 28 290 -19 7788 146 13 21 chr5 41719008 41719456 -157910694 + HSMAR2 DNA Mariner 851 1301 -1 203 323 10 21 chr5 41719733 41719829 -157910321 + CT-rich Low_complexity Low_complexity 3 97 0 495 260 24 4 chr5 41720397 41720550 -157909600 - MLT1H LTR MaLR -265 170 21 188 283 28 75 chr5 41720798 41720904 -157909246 + MIR3 SINE MIR 87 187 -21 420 231 16 33 chr5 41721135 41721256 -157908894 + MLT1I LTR MaLR 273 391 -18 195 320 51 0 chr5 41721345 41721454 -157908696 + MIR SINE MIR 38 152 -67 244 337 40 0 chr5 41721581 41721682 -157908468 - MIR SINE MIR -78 184 80 250 311 0 0 chr5 41722340 41722401 -157907749 + MER5A DNA MER1_type 46 106 -83 915 240 81 0 chr5 41722527 41722748 -157907402 + L1MB1 LINE L1 5925 6163 -5 250 178 55 0 chr5 41722828 41722901 -157907249 + CT-rich Low_complexity Low_complexity 4 80 0 605 277 134 27 chr5 41723705 41724116 -157906034 + L2 LINE L2 2828 3282 -31 386 246 127 0 chr5 41724148 41724266 -157905884 - MIR SINE MIR -24 238 106 1183 217 14 0 chr5 41724332 41724553 -157905597 + MER58A DNA MER1_type 1 224 0 197 373 29 0 chr5 41724702 41724804 -157905346 + MIR SINE MIR 33 137 -71 195 162 0 0 chr5 41724820 41724857 -157905293 + (TAA)n Simple_repeat Simple_repeat 1 37 0 1126 273 50 43 chr5 41725040 41725439 -157904711 + MLT1I LTR MaLR 6 407 -2 3881 59 0 0 chr5 41726032 41726200 -157903950 + L1PA12 LINE L1 5329 5487 -681 3881 108 0 2 chr5 41726200 41726747 -157903403 + L1PA12 LINE L1 5621 6168 0 3881 59 0 0 chr5 41726747 41726787 -157903363 + L1PA12 LINE L1 5487 6168 0 1291 204 70 32 chr5 41728014 41728357 -157901793 - MLT1A1 LTR MaLR 0 365 10 30 0 0 0 chr5 41728521 41728551 -157901599 + AT_rich Low_complexity Low_complexity 1 30 0 241 352 38 0 chr5 41729525 41729630 -157900520 - MIR SINE MIR -68 140 32 1294 121 97 0 chr5 41729654 41729861 -157900289 + MER30 DNA MER1_type 4 230 0 334 319 39 44 chr5 41731636 41731818 -157898332 - MER5A DNA MER1_type -2 187 7 199 306 0 14 chr5 41732099 41732171 -157897979 + MIR3 SINE MIR 90 160 -48 2051 117 13 7 chr5 41732298 41732596 -157897554 + AluSg SINE Alu 1 300 -10 841 256 22 22 chr5 41732637 41732860 -157897290 + MLT1G1 LTR MaLR 3 225 -370 827 307 95 34 chr5 41732887 41733528 -157896622 - L2 LINE L2 -556 2758 2079 1694 216 134 10 chr5 41733533 41733995 -157896155 - MER39 LTR ERV1 -7 700 5 333 319 91 13 chr5 41734053 41734285 -157895865 - L2 LINE L2 -1636 1678 1429 15611 42 1 48 chr5 41734752 41736366 -157893784 + L1P2 LINE L1 3387 4843 -1312 2379 89 3 0 chr5 41736366 41736668 -157893482 + AluY SINE Alu 1 303 -8 15611 42 1 48 chr5 41736668 41737538 -157892612 + L1P2 LINE L1 4843 5753 -402 799 143 46 93 chr5 41737652 41737868 -157892282 + THE1C LTR MaLR 170 375 0 545 255 62 31 chr5 41738719 41738911 -157891239 + MIR SINE MIR 20 217 -45 1753 184 125 10 chr5 41739237 41739628 -157890522 - MER63B DNA MER1_type 0 436 1 500 272 129 26 chr5 41740527 41740759 -157889391 + MIR SINE MIR 7 262 0 2967 129 72 4 chr5 41741365 41741867 -157888283 - L1MA8 LINE L1 -10 6281 5746 304 242 81 16 chr5 41742271 41742395 -157887755 + MIR SINE MIR 73 204 -58 548 248 0 75 chr5 41742399 41742514 -157887636 + MIR SINE MIR 14 115 -147 2471 61 3 0 chr5 41742514 41742810 -157887340 - AluY SINE Alu -14 297 1 548 248 0 75 chr5 41742810 41742855 -157887295 + MIR SINE MIR 115 162 -100 1890 125 4 14 chr5 41743118 41743399 -157886751 + AluSx SINE Alu 23 300 -12 471 271 89 49 chr5 41743548 41743898 -157886252 - L1ME4a LINE L1 -207 5914 5551 372 280 67 64 chr5 41744384 41744666 -157885484 - L1ME4a LINE L1 -1111 5035 4753 680 286 28 0 chr5 41745177 41745355 -157884795 + MLT1I LTR MaLR 225 407 -2 393 172 210 48 chr5 41745930 41746109 -157884041 + MIR SINE MIR 19 213 -49 2213 120 0 3 chr5 41746115 41746414 -157883736 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr5 41746451 41746473 -157883677 + AT_rich Low_complexity Low_complexity 1 22 0 602 255 19 0 chr5 41746734 41746891 -157883259 + MIR SINE MIR 81 240 -22 217 333 43 0 chr5 41747436 41747553 -157882597 + MIR SINE MIR 84 205 -57 313 113 57 24 chr5 41748922 41749046 -157881104 + (CTATA)n Simple_repeat Simple_repeat 3 130 0 193 67 22 44 chr5 41749146 41749191 -157880959 + (CTATA)n Simple_repeat Simple_repeat 2 45 0 1600 109 53 12 chr5 41749229 41749476 -157880674 - AluSx SINE Alu -55 257 1 420 239 62 0 chr5 41750103 41750216 -157879934 - L2 LINE L2 -2 3311 3192 197 237 102 51 chr5 41750298 41750416 -157879734 - L2 LINE L2 -910 2404 2281 276 321 36 29 chr5 41750757 41750897 -157879253 + MIR3 SINE MIR 2 142 -66 646 212 47 35 chr5 41750917 41751087 -157879063 + MER5A DNA MER1_type 18 189 0 3451 117 24 22 chr5 41751614 41752118 -157878032 - MER1A DNA MER1_type -6 523 19 1420 292 70 54 chr5 41752479 41753161 -157876989 - MER115 DNA AcHobo 0 693 1 1983 141 30 0 chr5 41754438 41754735 -157875415 + AluSx SINE Alu 1 306 -6 242 287 35 0 chr5 41755420 41755507 -157874643 + MER117 DNA MER1_type 3 92 -105 298 303 153 18 chr5 41755553 41755880 -157874270 - L2 LINE L2 -850 2464 2094 277 146 0 0 chr5 41755933 41755974 -157874176 + MIR SINE MIR 111 151 -111 556 314 50 4 chr5 41755986 41756225 -157873925 + HAL1 LINE L1 2 251 -2256 238 210 97 16 chr5 41756353 41756415 -157873735 - L1MC/D LINE L1 -2014 5794 5728 39 84 0 0 chr5 41756578 41756673 -157873477 + AT_rich Low_complexity Low_complexity 1 95 0 2066 41 0 8 chr5 41757155 41757398 -157872752 + L1PA5 LINE L1 5908 6148 -6 207 191 0 43 chr5 41757528 41757575 -157872575 + GA-rich Low_complexity Low_complexity 1 45 0 195 186 0 0 chr5 41757868 41757911 -157872239 + (TAA)n Simple_repeat Simple_repeat 2 44 0 1683 144 107 0 chr5 41757980 41758243 -157871907 - AluSp SINE Alu -22 291 1 1504 176 37 34 chr5 41758502 41758797 -157871353 - AluJo SINE Alu -16 296 1 511 263 126 17 chr5 41758995 41759170 -157870980 + MIR SINE MIR 9 202 -60 231 177 81 0 chr5 41759234 41759296 -157870854 + GA-rich Low_complexity Low_complexity 1 67 0 21 0 0 0 chr5 41760057 41760078 -157870072 + AT_rich Low_complexity Low_complexity 1 21 0 870 182 113 86 chr5 41761399 41761690 -157868460 + MLT1J2 LTR MaLR 7 305 -145 1659 204 76 39 chr5 41761690 41761748 -157868402 + Charlie4a DNA MER1_type 21 75 -1886 2458 76 0 0 chr5 41761748 41762050 -157868100 + AluY SINE Alu 1 302 -9 1659 204 76 39 chr5 41762050 41762453 -157867697 + Charlie4a DNA MER1_type 75 499 -9 322 244 16 114 chr5 41762468 41762591 -157867559 + MLT1J2 LTR MaLR 267 377 -73 229 265 168 34 chr5 41763716 41764039 -157866111 - L1ME4a LINE L1 -114 6007 5650 21 0 0 0 chr5 41764098 41764119 -157866031 + AT_rich Low_complexity Low_complexity 1 21 0 382 259 19 71 chr5 41764452 41764670 -157865480 + MIR3 SINE MIR 2 251 -11 343 350 50 0 chr5 41764715 41764835 -157865315 + L2 LINE L2 3187 3312 -1 271 279 0 15 chr5 41765346 41765414 -157864736 + MIR3 SINE MIR 139 205 -3 2473 123 18 39 chr5 41766333 41766715 -157863435 + THE1C LTR MaLR 1 374 -1 11483 107 9 29 chr5 41766716 41768328 -157861822 + THE1C-int LTR MaLR 1 1580 0 2523 114 13 42 chr5 41768328 41768714 -157861436 + THE1C LTR MaLR 1 375 0 1140 219 37 0 chr5 41768809 41769024 -157861126 + MER58A DNA MER1_type 2 224 0 1706 176 24 7 chr5 41769273 41769568 -157860582 - AluJo SINE Alu -10 302 3 201 354 53 18 chr5 41769750 41769863 -157860287 - MIR SINE MIR -95 167 51 234 0 0 0 chr5 41769945 41769971 -157860179 + (T)n Simple_repeat Simple_repeat 1 26 0 1334 270 94 11 chr5 41771287 41771661 -157858489 - MLT1I LTR MaLR -4 405 1 721 249 13 16 chr5 41771793 41771970 -157858180 - MER5B DNA MER1_type -4 185 1 407 279 16 39 chr5 41771978 41772001 -157858149 + MIR3 SINE MIR 19 41 -167 2075 114 3 20 chr5 41772001 41772349 -157857801 - AluSq SINE Alu 0 313 3 407 279 16 39 chr5 41772349 41772499 -157857651 + MIR3 SINE MIR 41 193 -15 257 223 116 33 chr5 41773543 41773664 -157856486 + L1ME4a LINE L1 5984 6114 -7 439 221 21 0 chr5 41773677 41773772 -157856378 + MIR SINE MIR 84 180 -82 296 272 0 12 chr5 41773775 41773856 -157856294 + MER116 DNA Mariner 1 80 0 622 230 63 11 chr5 41774013 41774187 -157855963 - L1ME1 LINE L1 -49 6117 5935 1990 123 0 3 chr5 41774548 41774872 -157855278 + AluSx SINE Alu 1 323 0 303 341 0 0 chr5 41775454 41775583 -157854567 + MIR SINE MIR 10 138 -124 292 264 60 54 chr5 41775614 41775781 -157854369 + L2 LINE L2 2897 3064 -208 1071 281 12 0 chr5 41775866 41776119 -157854031 - MIR SINE MIR -2 260 5 477 264 200 0 chr5 41776154 41776309 -157853841 - MER5A DNA MER1_type 0 189 4 720 191 79 11 chr5 41776341 41776519 -157853631 - Charlie1b DNA MER1_type -15 508 319 * 820 255 10 10 chr5 41776515 41776711 -157853439 - Charlie1b DNA MER1_type -327 196 1 293 0 27 0 chr5 41776877 41776914 -157853236 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2132 67 10 67 chr5 41776916 41777216 -157852934 - AluSp SINE Alu -30 283 1 321 203 29 14 chr5 41777887 41777956 -157852194 - L3 LINE CR1 -3 1574 1505 * 400 194 61 0 chr5 41777944 41778042 -157852108 + MER5A DNA MER1_type 9 112 -77 952 219 6 6 chr5 41778227 41778405 -157851745 + MER5B DNA MER1_type 1 178 0 2395 94 10 0 chr5 41779426 41779733 -157850417 + AluSg SINE Alu 1 310 0 24 53 0 0 chr5 41779787 41779825 -157850325 + AT_rich Low_complexity Low_complexity 1 38 0 2790 148 40 23 chr5 41780149 41780628 -157849522 - L1MB1 LINE L1 0 6168 5682 28 0 0 0 chr5 41780950 41780978 -157849172 + AT_rich Low_complexity Low_complexity 1 28 0 651 167 28 0 chr5 41781256 41781364 -157848786 - LTR8 LTR ERV1 -107 584 474 184 330 170 0 chr5 41781895 41782007 -157848143 - MIR3 SINE MIR -1 207 77 1156 156 19 28 chr5 41782938 41783150 -157847000 + L1PA16 LINE L1 5947 6156 -10 371 0 68 0 chr5 41783462 41783521 -157846629 + (TG)n Simple_repeat Simple_repeat 2 64 0 392 335 28 16 chr5 41783692 41783874 -157846276 - MIR3 SINE MIR -15 193 10 2029 138 7 13 chr5 41784572 41784876 -157845274 - AluSq SINE Alu -11 302 1 272 202 70 70 chr5 41784886 41785000 -157845150 - L1MC/D LINE L1 -1988 5820 5707 3195 234 61 17 chr5 41785612 41786670 -157843480 + L1ME3A LINE L1 4962 6077 -93 203 382 54 43 chr5 41786835 41787021 -157843129 + L2 LINE L2 3073 3260 -12 479 234 42 72 chr5 41787145 41787312 -157842838 + L1ME3A LINE L1 6003 6164 -6 717 291 113 17 chr5 41787343 41787697 -157842453 + L1MC4a LINE L1 5477 5864 -1944 211 197 0 82 chr5 41788793 41788854 -157841296 - MIR SINE MIR -137 71 16 691 268 112 22 chr5 41788869 41789093 -157841057 + MIR SINE MIR 18 261 -1 275 370 54 0 chr5 41789206 41789409 -157840741 + L3 LINE CR1 1357 1570 -7 21 36 0 0 chr5 41793152 41793180 -157836970 + AT_rich Low_complexity Low_complexity 1 28 0 831 293 63 0 chr5 41793815 41794054 -157836096 - MIR SINE MIR -1 261 8 234 243 206 28 chr5 41794539 41794646 -157835504 - MIR SINE MIR -62 146 21 3429 210 69 43 chr5 41794831 41795655 -157834495 - L1ME1 LINE L1 -5 6161 5282 2014 147 0 0 chr5 41795655 41795955 -157834195 + AluSx SINE Alu 2 301 -11 3429 210 69 43 chr5 41795955 41796319 -157833831 - L1ME1 LINE L1 -884 5282 4929 206 284 86 25 chr5 41798281 41798362 -157831788 + MER5A DNA MER1_type 97 182 -7 370 317 35 35 chr5 41798703 41798905 -157831245 + MIR SINE MIR 15 216 -46 197 268 24 61 chr5 41798903 41798985 -157831165 + L3b LINE CR1 1155 1233 -350 * 361 267 63 84 chr5 41800630 41800821 -157829329 - MLT1J2 LTR MaLR 0 450 264 276 234 6 6 chr5 41800904 41800997 -157829153 - MLT1J1 LTR MaLR -331 119 26 1506 155 39 28 chr5 41801376 41801690 -157828460 + AluJb SINE Alu 1 312 0 2573 62 0 0 chr5 41801956 41802262 -157827888 - AluY SINE Alu -5 306 1 358 308 57 25 chr5 41803076 41803235 -157826915 + MIR SINE MIR 29 192 -70 277 388 89 28 chr5 41804483 41804841 -157825309 + L2 LINE L2 2866 3245 -27 312 83 0 0 chr5 41805717 41805765 -157824385 + (TG)n Simple_repeat Simple_repeat 2 49 0 1794 266 29 40 chr5 41805913 41806491 -157823659 + L1MA8 LINE L1 469 1040 -6449 15263 186 31 20 chr5 41806587 41811115 -157819035 + L1MA8 LINE L1 1897 6501 -1209 2323 107 3 0 chr5 41811115 41811413 -157818737 - AluSx SINE Alu -13 299 1 15263 186 31 20 chr5 41811413 41812635 -157817515 + L1MA8 LINE L1 6501 7708 -2 774 291 86 30 chr5 41812928 41813419 -157816731 + LTR33 LTR ERVL 3 520 -1 565 162 45 0 chr5 41813726 41813837 -157816313 + L1MB1 LINE L1 6047 6162 -6 751 122 0 154 chr5 41813930 41814151 -157815999 - MER53 DNA DNA -2 187 1 245 352 16 32 chr5 41814263 41814388 -157815762 + MIR SINE MIR 22 144 -118 1104 249 97 20 chr5 41814845 41815235 -157814915 - LTR16C LTR ERVL 0 491 72 700 122 9 0 chr5 41815736 41815843 -157814307 - AluSg/x SINE Alu -9 301 194 189 0 0 0 chr5 41815844 41815865 -157814285 + (T)n Simple_repeat Simple_repeat 1 21 0 871 214 0 7 chr5 41815877 41816031 -157814119 + FRAM SINE Alu 1 152 -24 2484 52 0 7 chr5 41816040 41816345 -157813805 + AluY SINE Alu 1 303 -8 1846 153 14 0 chr5 41817271 41817552 -157812598 + AluSx SINE Alu 1 285 -27 220 299 197 8 chr5 41818218 41818335 -157811815 + MIR3 SINE MIR 36 174 -34 947 239 59 0 chr5 41818396 41818618 -157811532 + MIR SINE MIR 25 259 -3 378 0 0 0 chr5 41818696 41818738 -157811412 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2004 110 0 39 chr5 41818752 41819034 -157811116 - AluSx SINE Alu -37 275 5 386 339 52 60 chr5 41819034 41819277 -157810873 + L2 LINE L2 2918 3160 -112 573 76 0 13 chr5 41819396 41819475 -157810675 + MER30 DNA MER1_type 1 78 -152 276 208 0 0 chr5 41819675 41819723 -157810427 + MER30 DNA MER1_type 183 230 0 450 294 75 0 chr5 41819733 41819879 -157810271 + MIR SINE MIR 68 224 -38 1800 192 76 0 chr5 41821352 41821774 -157808376 + Charlie4a DNA MER1_type 28 481 -27 830 193 5 96 chr5 41821805 41822023 -157808127 - MER58A DNA MER1_type 0 224 27 524 184 40 46 chr5 41823210 41823362 -157806788 - MER112 DNA MER1_type -93 167 17 308 223 23 140 chr5 41823548 41823813 -157806337 - MER112 DNA MER1_type -6 254 21 310 323 94 38 chr5 41823830 41824118 -157806032 - L3 LINE CR1 -54 1523 1220 190 326 128 0 chr5 41824612 41824698 -157805452 + MIR3 SINE MIR 64 160 -48 226 225 0 0 chr5 41824833 41824873 -157805277 + MIR3 SINE MIR 150 189 -19 666 206 8 0 chr5 41825129 41825255 -157804895 - AluJb SINE Alu -7 305 179 1307 139 139 43 chr5 41825428 41825686 -157804464 - AluJo SINE Alu -24 288 6 639 200 54 87 chr5 41826924 41827109 -157803041 + MIR SINE MIR 63 241 -21 1093 187 75 13 chr5 41827264 41827569 -157802581 - MER33 DNA MER1_type 0 324 1 640 250 149 16 chr5 41827622 41827830 -157802320 - MIR SINE MIR 0 262 35 185 178 67 0 chr5 41829135 41829180 -157800970 - MER5A DNA MER1_type -18 171 124 16830 135 19 57 chr5 41929240 41929796 -157700354 - L1PA12 LINE L1 -2753 4831 4255 2163 124 13 3 chr5 41929796 41930102 -157700048 - AluSc SINE Alu 0 309 1 16830 135 19 57 chr5 41930102 41932790 -157697360 - L1PA12 LINE L1 -3329 4255 485 21 36 0 0 chr5 41933327 41933355 -157696795 + AT_rich Low_complexity Low_complexity 1 28 0 1647 214 81 37 chr5 41934015 41934450 -157695700 + MSTB2 LTR MaLR 4 457 0 201 279 101 47 chr5 41934502 41934631 -157695519 - MIR3 SINE MIR -58 150 15 219 328 78 26 chr5 41935594 41935710 -157694440 + MER5A DNA MER1_type 64 185 -4 337 230 7 149 chr5 41938208 41938356 -157691794 - MIR3 SINE MIR -3 205 79 312 27 0 0 chr5 41938811 41938848 -157691302 + (CA)n Simple_repeat Simple_repeat 2 38 0 480 316 51 0 chr5 41938988 41939146 -157691004 - MIR SINE MIR -94 168 3 207 0 0 0 chr5 41940302 41940325 -157689825 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1968 94 20 0 chr5 41940359 41940614 -157689536 - AluSq SINE Alu -53 260 1 222 327 0 0 chr5 41941359 41941411 -157688739 - L2 LINE L2 -20 3293 3242 1989 139 171 29 chr5 41941473 41941636 -157688514 + MSTA LTR MaLR 1 140 -288 2108 110 0 26 chr5 41941636 41941946 -157688204 + AluSp SINE Alu 1 302 -11 1989 139 171 29 chr5 41941946 41942157 -157687993 + MSTA LTR MaLR 140 428 0 463 312 129 58 chr5 41942544 41942695 -157687455 - L2 LINE L2 -572 2742 2603 2316 120 133 13 chr5 41942695 41943077 -157687073 - MSTA LTR MaLR 0 428 1 463 312 129 58 chr5 41943077 41943646 -157686504 - L2 LINE L2 -711 2603 1971 224 135 0 19 chr5 41943773 41943825 -157686325 + (TAAAAA)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr5 41944123 41944145 -157686005 + AT_rich Low_complexity Low_complexity 1 22 0 1802 118 0 4 chr5 41944205 41944460 -157685690 + AluSx SINE Alu 1 254 -58 1430 218 104 47 chr5 41944560 41945197 -157684953 + L1MC5 LINE L1 7254 7926 -35 2268 100 3 3 chr5 41945382 41945681 -157684469 + AluSg SINE Alu 1 299 -11 1834 155 3 24 chr5 41947134 41947431 -157682719 + AluSx SINE Alu 1 291 -21 2324 185 59 27 chr5 41947859 41948302 -157681848 - MSTB2 LTR MaLR 0 457 1 250 349 0 12 chr5 41949205 41949291 -157680859 + MIR SINE MIR 20 104 -158 217 272 71 42 chr5 41949794 41949938 -157680212 + MIR3 SINE MIR 1 152 -96 203 152 0 0 chr5 41950213 41950246 -157679904 + (TG)n Simple_repeat Simple_repeat 2 34 0 467 298 16 0 chr5 41950403 41950524 -157679626 - L2 LINE L2 -8 3305 3183 781 255 33 127 chr5 41951823 41952344 -157677806 - MARNA DNA Mariner -39 547 76 21 57 0 0 chr5 41952710 41952745 -157677405 + AT_rich Low_complexity Low_complexity 1 35 0 1645 166 0 58 chr5 41952780 41953093 -157677057 - AluJb SINE Alu -17 295 1 844 134 0 0 chr5 41953616 41953735 -157676415 - AluSg/x SINE Alu -8 302 184 1026 157 0 76 chr5 41953840 41953908 -157676242 + L1PB3 LINE L1 5971 6043 -111 2164 126 0 0 chr5 41953908 41954210 -157675940 + AluSc SINE Alu 1 302 -7 1026 157 0 76 chr5 41954210 41954339 -157675811 + L1PB3 LINE L1 6043 6153 -1 266 118 39 0 chr5 41954359 41954410 -157675740 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 2181 198 73 44 chr5 41955123 41955628 -157674522 - MLT2B1 LTR ERVL 0 520 1 206 368 63 21 chr5 41955924 41956114 -157674036 + MIR3 SINE MIR 7 204 -4 187 352 113 0 chr5 41956131 41956273 -157673877 - MIR SINE MIR -16 246 89 772 334 32 16 chr5 41956705 41957311 -157672839 - L1MC4a LINE L1 -1922 5886 5276 26 74 0 0 chr5 41957418 41957472 -157672678 + AT_rich Low_complexity Low_complexity 1 54 0 369 266 102 33 chr5 41957566 41957870 -157672280 - L1MC4a LINE L1 -1444 4702 4378 252 278 153 14 chr5 41958114 41958258 -157671892 - L1MC4a LINE L1 -2409 3737 3574 410 301 145 15 chr5 41958289 41958551 -157671599 + L2 LINE L2 2384 2679 -635 2610 174 51 14 chr5 41958619 41959112 -157671038 - LTR53 LTR ERVL -8 511 1 536 315 4 22 chr5 41959121 41959375 -157670775 + L2 LINE L2 2775 3023 -290 452 294 47 28 chr5 41959450 41959720 -157670430 - L1ME3A LINE L1 -284 5886 5610 266 256 0 26 chr5 41960309 41960387 -157669763 + CT-rich Low_complexity Low_complexity 3 78 0 451 262 35 21 chr5 41960817 41960962 -157669188 + MIR3 SINE MIR 19 165 -43 2274 101 0 10 chr5 41960968 41961266 -157668884 + AluSc SINE Alu 1 295 -14 207 364 83 8 chr5 41962250 41962382 -157667768 - MIR3 SINE MIR -64 144 3 243 242 152 20 chr5 41962461 41962560 -157667590 + LTR33A LTR ERVL 412 523 0 350 312 9 0 chr5 41962611 41962720 -157667430 - MIR3 SINE MIR -35 173 64 434 324 54 0 chr5 41962795 41962980 -157667170 + MIR SINE MIR 46 240 -22 1976 119 0 0 chr5 41963392 41963660 -157666490 - AluSg SINE Alu -9 301 34 936 289 141 5 chr5 41964047 41964445 -157665705 - LTR33 LTR ERVL -63 458 7 205 446 161 15 chr5 41965910 41966376 -157663774 + L2 LINE L2 2273 2806 -508 224 167 21 21 chr5 41967247 41967295 -157662855 + CT-rich Low_complexity Low_complexity 5 52 0 207 0 0 0 chr5 41967507 41967530 -157662620 + (TG)n Simple_repeat Simple_repeat 1 23 0 586 315 86 21 chr5 41967724 41968112 -157662038 + LTR16B LTR ERVL 5 464 0 1425 112 0 23 chr5 41968242 41968457 -157661693 + AluSq SINE Alu 1 210 -103 31 26 0 0 chr5 41969143 41969181 -157660969 + AT_rich Low_complexity Low_complexity 1 38 0 2197 79 14 0 chr5 41969181 41969458 -157660692 - AluSq SINE Alu -24 289 9 232 235 35 71 chr5 41969999 41970084 -157660066 - MIR SINE MIR -3 259 178 256 319 21 11 chr5 41970255 41970349 -157659801 - MIR SINE MIR -137 125 31 695 137 114 0 chr5 41972199 41972330 -157657820 - L1MA9 LINE L1 0 6312 6167 2632 181 19 72 chr5 41972473 41973115 -157657035 - LTR9 LTR ERV1 0 612 5 1965 107 8 0 chr5 41973387 41973649 -157656501 - AluSq SINE Alu -49 264 1 1997 54 149 4 chr5 41973714 41973975 -157656175 + AluY SINE Alu 1 299 -12 22 0 0 0 chr5 41974421 41974443 -157655707 + AT_rich Low_complexity Low_complexity 1 22 0 545 242 6 30 chr5 41974465 41974491 -157655659 - L1MA10 LINE L1 -1 6333 6308 1097 264 22 32 chr5 41974491 41974862 -157655288 - L1ME1 LINE L1 -14 6152 5786 1776 181 0 22 chr5 41975272 41975587 -157654563 - AluJo SINE Alu -4 308 1 187 203 156 0 chr5 41976750 41976814 -157653336 + L2 LINE L2 2976 3049 -223 22 56 0 0 chr5 41976871 41976907 -157653243 + AT_rich Low_complexity Low_complexity 1 36 0 507 317 97 34 chr5 41977109 41977459 -157652691 - MLT1K LTR MaLR -15 573 202 221 213 43 0 chr5 41977868 41977915 -157652235 + GA-rich Low_complexity Low_complexity 4 52 0 472 170 9 18 chr5 41978618 41978730 -157651420 + GA-rich Low_complexity Low_complexity 2 112 0 2387 99 3 3 chr5 41978865 41979178 -157650972 + AluSp SINE Alu 1 313 0 1580 157 0 12 chr5 41980672 41980914 -157649236 + AluJb SINE Alu 1 239 -73 320 188 16 0 chr5 41982103 41982167 -157647983 - L2 LINE L2 -1 3312 3248 328 321 154 37 chr5 41983167 41983348 -157646802 + L2 LINE L2 1294 1452 -1862 216 0 0 0 chr5 41983348 41983372 -157646778 + (CCCCCT)n Simple_repeat Simple_repeat 2 25 0 328 321 154 37 chr5 41983372 41983778 -157646372 + L2 LINE L2 1452 1991 -1323 2512 87 0 0 chr5 41983778 41984089 -157646061 - AluSx SINE Alu -1 311 1 328 321 154 37 chr5 41984089 41984253 -157645897 + L2 LINE L2 1991 2134 -1180 2186 120 3 3 chr5 41985321 41985622 -157644528 - AluSq SINE Alu -12 301 1 2349 212 2 5 chr5 41986251 41986676 -157643474 + MLT1F LTR MaLR 1 424 -118 587 165 9 28 chr5 41986733 41986842 -157643308 + MLT1F LTR MaLR 428 534 -8 412 301 58 34 chr5 41986885 41987231 -157642919 + LTR16A1 LTR ERVL 1 444 -6 1033 331 50 15 chr5 41987391 41987787 -157642363 + ERVL LTR ERVL 4026 4435 -1329 316 272 41 33 chr5 41987880 41988050 -157642100 + ERVL LTR ERVL 5162 5335 -204 969 298 37 45 chr5 41988134 41988580 -157641570 + LTR16A LTR ERVL 8 448 -2 2815 88 3 8 chr5 41989149 41989524 -157640626 - THE1C LTR MaLR 0 375 3 483 293 80 7 chr5 41989604 41989946 -157640204 + LTR33 LTR ERVL 12 430 -91 1535 157 68 23 chr5 41990403 41990723 -157639427 + MER61B LTR ERV1 1 423 -2 190 273 193 34 chr5 41990773 41990949 -157639201 - MIR SINE MIR -12 250 47 1203 110 0 0 chr5 41992214 41992389 -157637761 - AluSg/x SINE Alu 0 305 131 224 234 0 0 chr5 41993067 41993114 -157637036 + GA-rich Low_complexity Low_complexity 1 47 0 186 43 0 0 chr5 41993712 41993735 -157636415 + (TC)n Simple_repeat Simple_repeat 1 23 0 764 183 0 0 chr5 41994791 41994917 -157635233 + MSTB1 LTR MaLR 1 126 -306 2841 153 76 25 chr5 41994920 41994964 -157635186 - MER21A LTR ERV1 0 931 891 3593 187 57 7 chr5 41994964 41995663 -157634487 + MER50 LTR ERV1 1 734 0 2841 153 76 25 chr5 41995663 41996147 -157634003 - MER21A LTR ERV1 -40 891 376 1081 172 131 0 chr5 41996152 41996373 -157633777 - MER21A LTR ERV1 -667 264 15 2205 113 0 7 chr5 41996428 41996730 -157633420 - AluSx SINE Alu -12 300 1 4019 178 35 54 chr5 41996730 41997453 -157632697 - MER21A-int LTR ERV1 -3 4188 3485 478 0 32 0 chr5 41997453 41997515 -157632635 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 4019 178 35 54 chr5 41997515 41997718 -157632432 - MER21A-int LTR ERV1 -706 3485 3280 9971 173 14 33 chr5 41997729 41998255 -157631895 - MER21A-int LTR ERV1 -1258 2933 2399 2485 40 10 3 chr5 41998255 41998555 -157631595 + AluY SINE Alu 1 302 -9 9971 173 14 33 chr5 41998555 41999834 -157630316 - MER21A-int LTR ERV1 -1792 2399 1162 2281 80 13 20 chr5 41999842 42000142 -157630008 + AluY SINE Alu 13 310 -1 6196 152 12 17 chr5 42000229 42001263 -157628887 - MER4B-int LTR ERV1 -2646 4112 3085 2758 182 32 29 chr5 42001322 42001876 -157628274 - MER21A LTR ERV1 0 931 376 1300 166 72 0 chr5 42001881 42002116 -157628034 - MER21A LTR ERV1 -667 264 13 225 0 0 0 chr5 42002125 42002150 -157628000 + (TG)n Simple_repeat Simple_repeat 2 26 0 418 127 84 0 chr5 42002161 42002232 -157627918 + MSTB1 LTR MaLR 125 201 -231 17918 57 1 3 chr5 42002245 42004453 -157625697 + L1PA3 LINE L1 4 2205 -3941 22126 40 3 2 chr5 42004553 42007284 -157622866 + L1P LINE L1 788 3519 -2627 25915 27 11 9 chr5 42007384 42011289 -157618861 + L1PA3 LINE L1 2240 6152 -3 1240 148 38 13 chr5 42011315 42011551 -157618599 + MSTB1 LTR MaLR 188 429 -3 378 261 130 7 chr5 42011606 42011744 -157618406 - MIR SINE MIR -8 254 100 180 367 0 17 chr5 42011802 42011862 -157618288 - MIR SINE MIR -184 78 20 2273 86 30 3 chr5 42012131 42012433 -157617717 + AluSq SINE Alu 2 311 -2 388 372 60 30 chr5 42012663 42012932 -157617218 + L2 LINE L2 2543 2819 -495 1132 176 144 14 chr5 42012932 42013278 -157616872 - MER3 DNA MER1_type 0 2624 2234 484 209 9 17 chr5 42013281 42013396 -157616754 - MER3 DNA MER1_type -53 156 43 765 221 30 109 chr5 42013417 42013684 -157616466 - MIR SINE MIR -3 259 14 2695 208 99 86 chr5 42015478 42016090 -157614060 + L1ME1 LINE L1 35 638 -5758 3453 34 0 0 chr5 42016090 42016500 -157613650 - L1PA4 LINE L1 -3 6152 5743 2695 208 99 86 chr5 42016500 42017103 -157613047 + L1ME1 LINE L1 638 1265 -5131 710 294 40 73 chr5 42017112 42017656 -157612494 + MLT1E LTR MaLR 2 527 -66 1213 127 7 76 chr5 42017728 42018003 -157612147 + AluSx SINE Alu 55 310 -2 357 203 0 0 chr5 42018005 42018079 -157612071 + MLT1E LTR MaLR 492 565 -2 3060 240 55 20 chr5 42018080 42019933 -157610217 + L1ME1 LINE L1 1287 3170 -3045 550 196 83 0 chr5 42019938 42020071 -157610079 + L1ME1 LINE L1 4746 4889 -1326 2118 231 24 44 chr5 42020076 42020675 -157609475 + L1ME1 LINE L1 5577 6163 -72 198 0 0 0 chr5 42020675 42020697 -157609453 + (CA)n Simple_repeat Simple_repeat 2 23 0 2118 231 24 44 chr5 42020697 42020760 -157609390 + L1ME1 LINE L1 6163 6226 -9 216 0 0 0 chr5 42021682 42021706 -157608444 + (T)n Simple_repeat Simple_repeat 1 24 0 429 259 160 0 chr5 42022096 42022227 -157607923 - MIR SINE MIR -102 160 9 25 0 0 0 chr5 42022402 42022427 -157607723 + AT_rich Low_complexity Low_complexity 1 25 0 369 289 113 6 chr5 42024171 42024330 -157605820 + MIR SINE MIR 72 247 -15 503 285 67 6 chr5 42024362 42024527 -157605623 + MER45A DNA AcHobo 1 175 -3 332 198 93 0 chr5 42024915 42025001 -157605149 - MER69 DNA AcHobo 0 2526 2433 297 0 0 0 chr5 42025215 42025248 -157604902 + (TA)n Simple_repeat Simple_repeat 2 34 0 2314 101 7 3 chr5 42025248 42025556 -157604594 - AluSq SINE Alu -4 309 1 304 204 29 7 chr5 42025663 42025800 -157604350 + (TA)n Simple_repeat Simple_repeat 1 140 0 327 273 140 20 chr5 42025914 42026064 -157604086 - MIR3 SINE MIR -28 180 13 27 29 0 0 chr5 42026501 42026535 -157603615 + AT_rich Low_complexity Low_complexity 1 34 0 391 225 82 110 chr5 42026755 42026800 -157603350 + MER5B DNA MER1_type 2 47 -131 1920 156 0 0 chr5 42026800 42027095 -157603055 - AluSx SINE Alu -17 295 1 391 225 82 110 chr5 42027095 42027231 -157602919 + MER5B DNA MER1_type 47 178 0 924 194 9 65 chr5 42027492 42027724 -157602426 - MER20 DNA MER1_type 0 219 1 205 259 71 12 chr5 42029703 42029788 -157600362 + MIR3 SINE MIR 109 198 -10 271 58 0 39 chr5 42029916 42029968 -157600182 + (GA)n Simple_repeat Simple_repeat 2 51 0 305 273 110 39 chr5 42030687 42030841 -157599309 + MIR SINE MIR 28 192 -70 1586 155 121 67 chr5 42030923 42031329 -157598821 + MSTA LTR MaLR 1 428 0 1672 123 55 22 chr5 42031400 42031929 -157598221 - MER4A LTR ERV1 0 664 1 826 217 28 46 chr5 42031939 42032156 -157597994 - MIR SINE MIR -40 222 10 2789 126 52 67 chr5 42032235 42032731 -157597419 + MER4B LTR ERV1 63 552 -58 2231 110 20 0 chr5 42032731 42033030 -157597120 - AluSx SINE Alu -7 305 1 2789 126 52 67 chr5 42033030 42033089 -157597061 + MER4B LTR ERV1 552 610 0 231 284 104 49 chr5 42033383 42033566 -157596584 - L2 LINE L2 -1 3312 3120 290 198 306 0 chr5 42033935 42034046 -157596104 + MER103 DNA DNA 19 163 -3 1944 166 80 19 chr5 42034083 42034548 -157595602 - MER50 LTR ERV1 0 734 242 312 260 110 30 chr5 42034637 42034737 -157595413 - MER50 LTR ERV1 -617 117 10 198 381 63 51 chr5 42034776 42035091 -157595059 - L2 LINE L2 -44 3228 2910 619 325 148 37 chr5 42035199 42035841 -157594309 - L2 LINE L2 -534 2780 2068 1855 169 5 63 chr5 42036054 42036451 -157593699 - MLT1A2 LTR MaLR 0 374 1 417 349 39 37 chr5 42036659 42037014 -157593136 - L2 LINE L2 -1108 2206 1851 3171 109 42 35 chr5 42037056 42037658 -157592492 - MER4B LTR ERV1 0 779 1 228 254 8 134 chr5 42037877 42038011 -157592139 + L2 LINE L2 2164 2280 -1034 183 293 53 0 chr5 42038469 42038544 -157591606 + MIR SINE MIR 128 206 -56 264 235 0 0 chr5 42038556 42038607 -157591543 - L2 LINE L2 -9 3304 3254 1876 125 4 0 chr5 42038947 42039211 -157590939 + AluSx SINE Alu 38 302 -10 659 136 58 45 chr5 42039372 42039526 -157590624 - MER106B DNA MER1_type 0 1059 904 917 144 69 0 chr5 42039717 42039890 -157590260 - MER20 DNA MER1_type 0 219 35 873 188 43 27 chr5 42040854 42041040 -157589110 + MER5A DNA MER1_type 1 189 0 578 319 27 21 chr5 42041048 42041236 -157588914 - MER5A DNA MER1_type 0 189 1 2473 42 0 13 chr5 42041387 42041695 -157588455 + AluY SINE Alu 1 304 -7 443 340 34 14 chr5 42042458 42042605 -157587545 + MER91A DNA MER1_type 4 153 -43 1808 168 7 67 chr5 42042781 42043198 -157586952 - L1MC2 LINE L1 -10 6334 5943 1891 163 6 11 chr5 42043444 42043793 -157586357 - MLT1A1 LTR MaLR -8 357 11 910 213 40 5 chr5 42043874 42044076 -157586074 + MER3 DNA MER1_type 1 209 0 208 0 62 0 chr5 42044180 42044212 -157585938 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2232 92 0 0 chr5 42044216 42044500 -157585650 - AluSg SINE Alu -26 284 1 22 99 0 0 chr5 42044648 42044719 -157585431 + AT_rich Low_complexity Low_complexity 1 71 0 2253 113 3 0 chr5 42044747 42045047 -157585103 - AluSx SINE Alu -11 301 1 185 374 28 50 chr5 42045371 42045553 -157584597 + MIR3 SINE MIR 7 184 -24 384 316 32 16 chr5 42046369 42046556 -157583594 + L2 LINE L2 3119 3308 -5 639 235 145 30 chr5 42046578 42046778 -157583372 + MIR SINE MIR 33 255 -7 214 353 60 27 chr5 42047324 42047474 -157582676 + MIR SINE MIR 47 201 -61 297 0 0 0 chr5 42047671 42047704 -157582446 + (CA)n Simple_repeat Simple_repeat 2 34 0 1599 88 0 44 chr5 42048199 42048427 -157581723 + AluY SINE Alu 84 301 -10 314 211 16 74 chr5 42049091 42049256 -157580894 + MIR SINE MIR 3 147 -69 181 302 16 16 chr5 42049499 42049562 -157580588 + L2 LINE L2 3242 3304 -9 185 323 131 20 chr5 42049645 42049744 -157580406 + MIR SINE MIR 24 133 -75 248 298 62 133 chr5 42049811 42050354 -157579796 + L2 LINE L2 2742 3270 -2 193 214 125 0 chr5 42050405 42050461 -157579689 + MIR SINE MIR 200 262 0 240 184 0 0 chr5 42051247 42051296 -157578854 + Alu SINE Alu 255 303 0 23 33 0 0 chr5 42051612 42051642 -157578508 + AT_rich Low_complexity Low_complexity 1 30 0 3652 190 21 59 chr5 42052430 42053333 -157576817 - L1MA9 LINE L1 -40 6272 5425 2093 126 47 47 chr5 42053333 42053697 -157576453 - THE1B LTR MaLR 0 364 1 3652 190 21 59 chr5 42053697 42054013 -157576137 - L1MA9 LINE L1 -887 5425 5099 304 338 55 28 chr5 42054286 42054431 -157575719 - L2 LINE L2 -12 3260 3112 31 26 0 0 chr5 42054865 42054903 -157575247 + AT_rich Low_complexity Low_complexity 1 38 0 895 134 98 12 chr5 42055209 42055373 -157574777 + FRAM SINE Alu 1 176 0 714 294 46 25 chr5 42055609 42055935 -157574215 + MLT1I LTR MaLR 59 391 -18 346 330 109 40 chr5 42055954 42056275 -157573875 - L2 LINE L2 -363 2951 2609 733 267 88 5 chr5 42056275 42056492 -157573658 - MIR SINE MIR -2 260 26 214 314 117 55 chr5 42056615 42057051 -157573099 - L2 LINE L2 -823 2491 2029 387 281 46 7 chr5 42057796 42057949 -157572201 + MER103 DNA DNA 2 160 -6 428 274 74 15 chr5 42058090 42058384 -157571766 + MLT1I LTR MaLR 70 408 -1 2026 115 7 39 chr5 42058566 42058871 -157571279 + AluSx SINE Alu 1 295 -17 2346 107 3 0 chr5 42058917 42059227 -157570923 + AluSp SINE Alu 1 311 -2 423 296 59 30 chr5 42059249 42059384 -157570766 - MER5A DNA MER1_type -49 140 2 348 216 68 0 chr5 42059695 42059783 -157570367 - MLT1K LTR MaLR -10 578 485 398 211 0 0 chr5 42060922 42060998 -157569152 + MER20 DNA MER1_type 139 214 -5 720 314 21 8 chr5 42061009 42061245 -157568905 - L2 LINE L2 -514 2800 2562 319 303 74 8 chr5 42061268 42061390 -157568760 - MIR SINE MIR -113 149 20 1528 240 128 6 chr5 42062020 42062504 -157567646 - L1ME3A LINE L1 -14 6156 5614 184 336 103 41 chr5 42062727 42062873 -157567277 + MIR3 SINE MIR 2 156 -52 * 512 324 200 16 chr5 42062870 42063240 -157566910 - L2 LINE L2 0 3272 2835 2067 131 16 7 chr5 42063280 42063586 -157566564 - AluSx SINE Alu -3 309 1 661 270 12 85 chr5 42063928 42064176 -157565974 - MIR SINE MIR 0 262 33 288 354 9 9 chr5 42064523 42064636 -157565514 - L2 LINE L2 -666 2648 2536 258 366 6 11 chr5 42064702 42064877 -157565273 + MER117 DNA MER1_type 6 179 -18 2577 139 26 12 chr5 42064907 42065325 -157564825 + MSTA LTR MaLR 5 428 0 344 214 43 43 chr5 42065576 42065693 -157564457 - MER103 DNA DNA -45 121 5 1939 113 92 11 chr5 42065871 42066153 -157563997 - AluSq SINE Alu -8 305 1 216 286 14 43 chr5 42066408 42066478 -157563672 + L2 LINE L2 3205 3272 0 591 296 62 4 chr5 42067152 42067395 -157562755 - MIR SINE MIR -4 258 2 1831 130 10 17 chr5 42067746 42068083 -157562067 - MER1B DNA MER1_type 0 339 34 970 239 127 7 chr5 42068374 42068658 -157561492 + LTR16A LTR ERVL 129 446 -4 806 265 168 19 chr5 42068882 42069351 -157560799 + L2 LINE L2 2742 3277 -36 205 295 46 81 chr5 42069353 42069526 -157560624 - L2 LINE L2 -901 2413 2247 2064 112 11 0 chr5 42069596 42069874 -157560276 + AluSx SINE Alu 1 281 -31 477 0 0 0 chr5 42069877 42069930 -157560220 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 479 223 64 38 chr5 42070050 42070207 -157559943 - MLT1K LTR MaLR -65 523 363 766 267 6 0 chr5 42070418 42070598 -157559552 - MER63A DNA MER1_type -28 182 2 314 321 53 15 chr5 42070599 42070730 -157559420 - MLT1K LTR MaLR -430 158 23 22 0 0 0 chr5 42071316 42071338 -157558812 + AT_rich Low_complexity Low_complexity 1 22 0 284 268 227 0 chr5 42071420 42071517 -157558633 + L2 LINE L2 3186 3304 -9 2205 91 17 3 chr5 42071543 42071840 -157558310 + AluSp SINE Alu 1 301 -12 2003 119 7 4 chr5 42072367 42072644 -157557506 + AluSx SINE Alu 15 292 -20 445 70 14 14 chr5 42072648 42072719 -157557431 + (TG)n Simple_repeat Simple_repeat 2 72 0 1822 134 65 0 chr5 42072910 42073186 -157556964 + AluJo SINE Alu 1 294 -18 602 265 146 18 chr5 42073574 42073793 -157556357 + MIR SINE MIR 6 252 -10 220 302 0 0 chr5 42073905 42073958 -157556192 + MIR SINE MIR 99 151 -111 220 98 146 0 chr5 42075712 42075753 -157554397 - L2 LINE L2 -3 3310 3264 403 219 0 10 chr5 42075877 42075973 -157554177 - MIR SINE MIR -49 213 119 2145 100 0 7 chr5 42076478 42076803 -157553347 + AluSg1 SINE Alu 1 323 0 359 348 78 5 chr5 42077311 42077515 -157552635 - L3 LINE CR1 -821 756 538 453 213 41 49 chr5 42078224 42078346 -157551804 + Charlie8 DNA MER1_type 12 132 -2285 279 267 30 69 chr5 42078883 42078984 -157551166 - MIR SINE MIR -76 132 36 647 233 123 36 chr5 42079002 42079221 -157550929 + MIR SINE MIR 1 238 -24 2262 52 42 3 chr5 42079825 42080112 -157550038 + AluY SINE Alu 1 298 -13 250 329 51 29 chr5 42080701 42080838 -157549312 - L2 LINE L2 -1035 2279 2140 385 311 126 30 chr5 42080888 42081380 -157548770 + L1 LINE L1 4882 5425 -751 721 251 5 10 chr5 42082310 42082505 -157547645 - MER119 DNA MER1_type -3 580 387 1018 228 65 19 chr5 42082506 42082830 -157547320 + MER2 DNA MER2_type 2 340 -5 1202 243 74 38 chr5 42082841 42083207 -157546943 - MER119 DNA MER1_type -200 383 5 204 273 99 41 chr5 42083308 42083429 -157546721 - L2 LINE L2 0 3272 3145 994 243 23 5 chr5 42083462 42083680 -157546470 - MER58A DNA MER1_type 0 224 3 455 240 142 27 chr5 42083972 42084197 -157545953 - HAL1 LINE L1 -760 1747 1497 290 238 119 20 chr5 42084358 42084509 -157545641 - HAL1 LINE L1 -1004 1503 1338 321 305 23 29 chr5 42085845 42086019 -157544131 + Charlie8 DNA MER1_type 10 182 -2235 305 361 23 23 chr5 42086704 42086834 -157543316 - MIR3 SINE MIR -76 132 3 719 263 66 99 chr5 42087293 42087870 -157542280 - HAL1 LINE L1 -1244 1263 706 574 207 36 57 chr5 42088833 42089026 -157541124 - L1ME1 LINE L1 -68 6098 5910 318 67 0 0 chr5 42090184 42090229 -157539921 + (TG)n Simple_repeat Simple_repeat 2 46 0 237 272 56 56 chr5 42090374 42090499 -157539651 - MLT1I LTR MaLR -8 401 277 358 259 30 15 chr5 42090605 42090736 -157539414 - MLT1I LTR MaLR -276 133 1 21 57 0 0 chr5 42091720 42091755 -157538395 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chr5 42092636 42092663 -157537487 + (CA)n Simple_repeat Simple_repeat 2 28 0 315 397 35 5 chr5 42094585 42094784 -157535366 + L2 LINE L2 2558 2762 -552 31 0 0 0 chr5 42096213 42096244 -157533906 + AT_rich Low_complexity Low_complexity 1 31 0 6796 60 49 12 chr5 42096244 42097150 -157533000 - L1PA7 LINE L1 -7 6147 5234 25 0 0 0 chr5 42097522 42097547 -157532603 + AT_rich Low_complexity Low_complexity 1 25 0 412 212 0 10 chr5 42097690 42097789 -157532361 - HAL1 LINE L1 -107 2400 2303 302 286 0 0 chr5 42097794 42097864 -157532286 + C-rich Low_complexity Low_complexity 3 72 0 263 342 35 0 chr5 42098016 42098130 -157532020 - HAL1 LINE L1 -505 2002 1885 1432 204 99 3 chr5 42098478 42098792 -157531358 + MER2 DNA MER2_type 1 344 0 289 256 12 0 chr5 42098880 42098966 -157531184 + L1ME LINE L1 5470 5556 -608 2211 277 103 25 chr5 42098994 42100393 -157529757 - HAL1 LINE L1 -859 1648 1 999 133 100 120 chr5 42100661 42100788 -157529362 + MER46A DNA MER2_type 1 122 -2609 1651 154 0 74 chr5 42100788 42101112 -157529038 - AluJb SINE Alu -3 309 10 999 133 100 120 chr5 42101112 42101225 -157528925 + MER46A DNA MER2_type 122 236 0 332 278 146 35 chr5 42101763 42101907 -157528243 + MER5A DNA MER1_type 30 189 0 2431 68 0 26 chr5 42104571 42104882 -157525268 + AluY SINE Alu 1 303 -8 555 243 65 8 chr5 42104946 42105214 -157524936 - L1M4 LINE L1 -1529 4617 4320 2198 120 0 0 chr5 42105872 42106171 -157523979 - AluSx SINE Alu -11 301 3 26 30 0 0 chr5 42106199 42106232 -157523918 + AT_rich Low_complexity Low_complexity 1 33 0 244 316 79 0 chr5 42107141 42107280 -157522870 + L1ME4a LINE L1 5967 6116 -5 32 86 0 0 chr5 42107661 42107742 -157522408 + AT_rich Low_complexity Low_complexity 1 81 0 1312 217 128 41 chr5 42107802 42108009 -157522141 - L1MD2 LINE L1 -2 6357 6169 396 0 0 0 chr5 42108009 42108053 -157522097 + (TG)n Simple_repeat Simple_repeat 2 45 0 1312 217 128 41 chr5 42108053 42108380 -157521770 - L1MD2 LINE L1 -190 6169 5782 204 125 0 0 chr5 42109007 42109039 -157521111 + (T)n Simple_repeat Simple_repeat 1 32 0 301 235 62 12 chr5 42109666 42109747 -157520403 + L2 LINE L2 3188 3272 0 281 172 16 0 chr5 42110577 42110641 -157519509 + (TA)n Simple_repeat Simple_repeat 1 65 0 2334 96 3 7 chr5 42110896 42111198 -157518952 + AluSp SINE Alu 1 301 -12 246 291 87 12 chr5 42111219 42111391 -157518759 + L1ME4a LINE L1 5756 5940 -181 2156 88 39 0 chr5 42111700 42111983 -157518167 - AluSg SINE Alu -16 294 1 2165 211 147 4 chr5 42112231 42112700 -157517450 - MLT1F LTR MaLR -2 540 5 901 255 41 122 chr5 42112781 42112815 -157517335 - L2 LINE L2 -4 3309 3274 2039 113 103 6 chr5 42112815 42113144 -157517006 + MER46B DNA MER2_type 1 236 0 901 255 41 122 chr5 42113144 42113650 -157516500 - L2 LINE L2 -39 3274 2813 412 316 159 29 chr5 42114905 42115326 -157514824 - L2 LINE L2 -960 2354 1879 337 294 95 24 chr5 42115370 42115581 -157514569 + L1ME4a LINE L1 5524 5749 -372 433 196 128 14 chr5 42115747 42115895 -157514255 + L1ME4a LINE L1 5957 6121 0 1608 131 71 22 chr5 42116152 42116420 -157513730 - AluSg SINE Alu -10 300 20 2127 121 14 0 chr5 42116466 42116756 -157513394 - AluSx SINE Alu -18 294 1 743 209 134 42 chr5 42119930 42120237 -157509913 + L1ME4a LINE L1 5521 5855 -266 363 298 0 0 chr5 42121217 42121301 -157508849 - MIR SINE MIR -131 131 48 299 250 118 0 chr5 42121311 42121387 -157508763 + L2 LINE L2 3201 3285 -28 23 54 0 0 chr5 42121507 42121544 -157508606 + AT_rich Low_complexity Low_complexity 1 37 0 2042 97 8 0 chr5 42122587 42122854 -157507296 + AluSg SINE Alu 31 299 -11 21 36 0 0 chr5 42123017 42123045 -157507105 + AT_rich Low_complexity Low_complexity 1 28 0 2122 135 0 6 chr5 42123433 42123744 -157506406 - AluJb SINE Alu -3 309 1 888 155 7 14 chr5 42125713 42125861 -157504289 + MER44D DNA MER2_type 13 429 -180 1565 270 173 32 chr5 42125896 42126922 -157503228 + HAL1 LINE L1 1338 2507 0 254 280 160 45 chr5 42127158 42127358 -157502792 - MIR SINE MIR -15 247 25 983 219 32 36 chr5 42128166 42128385 -157501765 + MER20 DNA MER1_type 1 218 -1 181 276 149 86 chr5 42129055 42129472 -157500678 - L2 LINE L2 -2 3270 2828 2130 118 0 29 chr5 42129726 42130039 -157500111 + AluSc SINE Alu 1 304 -5 31 76 0 0 chr5 42130720 42130786 -157499364 + AT_rich Low_complexity Low_complexity 1 66 0 24 0 0 0 chr5 42131005 42131029 -157499121 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 42132381 42132403 -157497747 + AT_rich Low_complexity Low_complexity 1 22 0 42 0 0 0 chr5 42134825 42134867 -157495283 + AT_rich Low_complexity Low_complexity 1 42 0 22 56 0 0 chr5 42137849 42137885 -157492265 + AT_rich Low_complexity Low_complexity 1 36 0 2251 100 16 3 chr5 42139556 42139865 -157490285 + AluSq SINE Alu 1 313 0 262 293 88 14 chr5 42140318 42140465 -157489685 + MIR SINE MIR 46 203 -59 190 340 0 0 chr5 42140854 42140907 -157489243 + L2 LINE L2 3213 3265 -7 306 309 82 67 chr5 42141776 42141855 -157488295 - L1ME4a LINE L1 -6 6115 6039 2161 104 0 7 chr5 42141855 42142153 -157487997 - AluSg SINE Alu -14 296 1 306 309 82 67 chr5 42142153 42142429 -157487721 - L1ME4a LINE L1 -82 6039 5755 366 198 94 0 chr5 42143104 42143210 -157486940 + MLT1E1 LTR MaLR 168 283 -371 380 279 136 77 chr5 42146821 42147327 -157482823 + MLT1H LTR MaLR 1 536 -13 222 91 0 0 chr5 42147878 42147911 -157482239 + (ATG)n Simple_repeat Simple_repeat 2 34 0 183 231 135 0 chr5 42148014 42148066 -157482084 + L2 LINE L2 3252 3310 -3 457 283 37 133 chr5 42150607 42150982 -157479168 - L2 LINE L2 0 3272 2934 2304 35 7 14 chr5 42151263 42151571 -157478579 - AluY SINE Alu 0 306 1 21 0 0 0 chr5 42151926 42151947 -157478203 + AT_rich Low_complexity Low_complexity 1 21 0 285 212 70 11 chr5 42151979 42152071 -157478079 + HsTC2 DNA Tc2 4 1898 0 325 289 30 60 chr5 42152072 42152238 -157477912 + L2 LINE L2 3135 3295 -18 285 329 73 22 chr5 42152243 42152380 -157477770 + MIR SINE MIR 112 255 -7 186 266 139 38 chr5 42153030 42153109 -157477041 + MIR SINE MIR 46 132 -76 1539 156 133 15 chr5 42154149 42154419 -157475731 + AluJb SINE Alu 1 302 0 1899 146 28 0 chr5 42154468 42154755 -157475395 - AluJb SINE Alu -17 295 1 1567 189 25 28 chr5 42155333 42155650 -157474500 - L1MB2 LINE L1 -2 6169 5854 1802 194 60 28 chr5 42155770 42156202 -157473948 + MLT1C LTR MaLR 22 467 0 224 267 107 13 chr5 42156233 42156308 -157473842 - MIR SINE MIR -69 139 58 223 330 58 0 chr5 42156489 42156592 -157473558 - L2 LINE L2 -5 3308 3200 383 225 170 37 chr5 42157088 42157305 -157472845 + MIR SINE MIR 3 248 -14 534 222 129 6 chr5 42157884 42158055 -157472095 + L1ME3 LINE L1 5970 6161 -1 221 81 0 27 chr5 42158444 42158481 -157471669 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 207 151 0 38 chr5 42158831 42158884 -157471266 + (TAA)n Simple_repeat Simple_repeat 1 51 0 202 220 0 20 chr5 42158992 42159042 -157471108 - MIR SINE MIR -48 214 166 956 187 6 11 chr5 42160243 42160425 -157469725 - MER5A DNA MER1_type -8 181 1 184 326 0 0 chr5 42160779 42160828 -157469322 - MIR SINE MIR -167 95 47 691 249 19 89 chr5 42161009 42161122 -157469028 - MER58A DNA MER1_type -2222 198 79 2120 108 17 3 chr5 42161122 42161417 -157468733 + AluSx SINE Alu 1 299 -13 691 249 19 89 chr5 42161417 42161442 -157468708 - MER58A DNA MER1_type -2341 79 54 2319 102 0 3 chr5 42161442 42161745 -157468405 - AluSx SINE Alu -10 302 1 691 249 19 89 chr5 42161745 42161818 -157468332 - MER58A DNA MER1_type -2366 54 1 721 251 141 73 chr5 42163228 42163695 -157466455 + MLT1L LTR MaLR 113 611 -4 324 158 0 0 chr5 42163751 42163808 -157466342 + (CA)n Simple_repeat Simple_repeat 1 57 0 2346 106 0 3 chr5 42165678 42165981 -157464169 - AluSq SINE Alu -11 302 1 248 291 55 55 chr5 42166052 42166179 -157463971 - MIR SINE MIR -63 145 19 236 268 0 0 chr5 42166689 42166745 -157463405 + A-rich Low_complexity Low_complexity 5 60 0 2241 97 0 0 chr5 42168503 42168791 -157461359 - AluSx SINE Alu -24 288 1 1942 118 39 15 chr5 42168855 42169187 -157460963 - L1MA5A LINE L1 -7 6290 5951 2280 110 0 3 chr5 42169383 42169683 -157460467 + AluSx SINE Alu 1 299 -13 286 367 24 9 chr5 42169715 42169925 -157460225 - L3 LINE CR1 -7 1570 1358 1323 161 20 91 chr5 42170106 42170174 -157459976 - MER41D LTR ERV1 -280 277 206 2297 105 0 0 chr5 42170174 42170469 -157459681 - AluSx SINE Alu -17 295 1 1323 161 20 91 chr5 42170469 42170698 -157459452 - MER41D LTR ERV1 -351 206 1 225 229 21 0 chr5 42170698 42170743 -157459407 - MLT1E1 LTR MaLR -608 46 1 286 214 28 45 chr5 42170992 42171170 -157458980 + (TATAA)n Simple_repeat Simple_repeat 3 177 0 25 0 0 0 chr5 42171181 42171206 -157458944 + AT_rich Low_complexity Low_complexity 1 25 0 321 209 81 23 chr5 42171714 42171800 -157458350 - MER103 DNA DNA -73 93 3 351 96 0 0 chr5 42171815 42171867 -157458283 + (TG)n Simple_repeat Simple_repeat 2 53 0 475 232 0 85 chr5 42174316 42174480 -157455670 - MIR SINE MIR 0 262 113 2426 81 7 0 chr5 42175320 42175618 -157454532 - AluSx SINE Alu -12 300 1 604 239 17 28 chr5 42175773 42175949 -157454201 + MER5B DNA MER1_type 5 178 0 2489 88 0 0 chr5 42177344 42177651 -157452499 + AluSg SINE Alu 1 307 -3 258 330 26 0 chr5 42178487 42178602 -157451548 + MIR SINE MIR 68 185 -77 536 198 0 45 chr5 42178681 42178792 -157451358 + MLT1I LTR MaLR 104 209 -200 376 257 37 44 chr5 42178964 42179100 -157451050 - L2 LINE L2 -2 3270 3136 197 180 20 0 chr5 42180933 42180983 -157449167 + CT-rich Low_complexity Low_complexity 1 51 0 640 245 25 80 chr5 42181558 42181795 -157448355 - MIR SINE MIR -16 246 23 502 191 223 37 chr5 42181905 42182093 -157448057 - MIR SINE MIR -38 224 2 2734 154 14 86 chr5 42182295 42182855 -157447295 + MLT2B1 LTR ERVL 1 520 0 872 124 71 41 chr5 42183368 42183537 -157446613 - Tigger3b DNA MER2_type -107 1124 951 1098 134 11 23 chr5 42183547 42183752 -157446398 + L1MA4A LINE L1 1 544 -6665 3273 247 19 1 chr5 42183883 42184558 -157445592 + L1MA4A LINE L1 1063 1749 -5460 * 6045 169 36 40 chr5 42184552 42186816 -157443334 + L1MA4A LINE L1 5155 7354 -11 5857 114 47 9 chr5 42186816 42187748 -157442402 - Tigger3b DNA MER2_type -263 968 1 600 184 217 0 chr5 42187754 42187906 -157442244 - MIR SINE MIR -66 196 12 35 24 0 0 chr5 42187907 42187949 -157442201 + AT_rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr5 42188013 42188033 -157442117 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 819 191 29 71 chr5 42188035 42188245 -157441905 - AluJo SINE Alu -20 292 92 2246 121 0 0 chr5 42188277 42188583 -157441567 - AluY SINE Alu -5 306 1 22 0 0 0 chr5 42188704 42188726 -157441424 + AT_rich Low_complexity Low_complexity 1 22 0 921 251 34 8 chr5 42189978 42190213 -157439937 + MER69 DNA AcHobo 4 244 -2282 1665 144 107 26 chr5 42190220 42190566 -157439584 + THE1C LTR MaLR 2 375 0 404 125 14 28 chr5 42190568 42190640 -157439510 + MER69 DNA AcHobo 2454 2524 -2 217 156 44 0 chr5 42190651 42190696 -157439454 + MIR SINE MIR 151 197 -65 1037 146 50 85 chr5 42190849 42191109 -157439041 + ORSL DNA AcHobo 1 251 -24 27 0 0 0 chr5 42192339 42192366 -157437784 + GC_rich Low_complexity Low_complexity 1 27 0 237 119 15 30 chr5 42192369 42192436 -157437714 + (CGGGGG)n Simple_repeat Simple_repeat 5 70 0 21 0 0 0 chr5 42192466 42192487 -157437663 + GC_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 42192548 42192571 -157437579 + GC_rich Low_complexity Low_complexity 1 23 0 21 104 0 0 chr5 42192809 42192886 -157437264 + GC_rich Low_complexity Low_complexity 1 77 0 412 170 71 18 chr5 42194574 42194686 -157435464 - L1MC4a LINE L1 -1974 5834 5717 404 37 19 0 chr5 42195443 42195497 -157434653 + (TA)n Simple_repeat Simple_repeat 1 55 0 848 276 75 44 chr5 42195600 42196052 -157434098 - L2 LINE L2 -12 3301 2836 247 350 57 0 chr5 42196131 42196254 -157433896 + L2 LINE L2 3184 3313 0 241 230 115 23 chr5 42198208 42198295 -157431855 - MIR3 SINE MIR -23 185 91 421 254 66 8 chr5 42198360 42198482 -157431668 + L2 LINE L2 3183 3311 -2 460 307 6 17 chr5 42198908 42199087 -157431063 + L1ME4a LINE L1 5501 5677 -444 2235 98 3 0 chr5 42199313 42199609 -157430541 - AluY SINE Alu -14 297 1 489 277 82 24 chr5 42199616 42199831 -157430319 + L1ME4a LINE L1 5710 5952 -169 324 0 0 0 chr5 42199831 42199867 -157430283 + (TG)n Simple_repeat Simple_repeat 2 37 0 489 277 82 24 chr5 42199867 42199979 -157430171 + L1ME4a LINE L1 5952 6056 -65 314 167 188 52 chr5 42200019 42200115 -157430035 + MIR SINE MIR 46 154 -108 1946 135 51 15 chr5 42201088 42201422 -157428728 + MER7A DNA MER2_type 2 345 -1 267 242 0 0 chr5 42202308 42202370 -157427780 - Charlie8 DNA MER1_type -991 1426 1365 576 270 105 84 chr5 42202374 42202756 -157427394 - Charlie8 DNA MER1_type -2017 400 11 303 270 72 13 chr5 42202800 42202952 -157427198 - L1ME4a LINE L1 -188 5933 5773 2534 74 0 0 chr5 42203227 42203538 -157426612 - AluY SINE Alu 0 311 1 362 286 40 31 chr5 42203578 42203739 -157426411 - L1ME4a LINE L1 -11 6110 5945 240 35 0 0 chr5 42203739 42203768 -157426382 + (CA)n Simple_repeat Simple_repeat 2 30 0 362 286 40 31 chr5 42203768 42203833 -157426317 - L1ME4a LINE L1 -176 5945 5882 367 61 0 0 chr5 42203835 42203884 -157426266 - Alu SINE Alu -6 294 246 182 36 0 36 chr5 42204259 42204287 -157425863 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2090 118 0 20 chr5 42204289 42204586 -157425564 - AluSq SINE Alu -20 293 3 318 232 99 49 chr5 42204820 42204962 -157425188 + L1ME4a LINE L1 5956 6104 -17 23 33 0 0 chr5 42204962 42204992 -157425158 + AT_rich Low_complexity Low_complexity 1 30 0 2092 132 7 0 chr5 42205655 42205950 -157424200 + AluSx SINE Alu 3 299 -13 1980 124 14 0 chr5 42206788 42207063 -157423087 + AluSx SINE Alu 1 279 -33 1783 107 0 50 chr5 42207063 42207343 -157422807 + LTR17 LTR ERV1 1 266 -514 1805 136 55 27 chr5 42309367 42309697 -157320453 - MER44D DNA MER2_type 0 609 1 181 311 167 15 chr5 42309830 42309962 -157320188 - L3 LINE CR1 -861 716 565 23 0 0 0 chr5 42310354 42310377 -157319773 + AT_rich Low_complexity Low_complexity 1 23 0 186 235 0 39 chr5 42312062 42312113 -157318037 - L3 LINE CR1 -5 1572 1524 210 200 67 0 chr5 42312713 42312758 -157317392 + L2 LINE L2 3224 3271 -1 201 176 0 0 chr5 42312856 42312890 -157317260 + T-rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr5 42314716 42314737 -157315413 + AT_rich Low_complexity Low_complexity 1 21 0 2113 112 0 3 chr5 42314762 42315057 -157315093 - AluSx SINE Alu -18 294 1 330 275 63 41 chr5 42317499 42317647 -157312503 + MIR3 SINE MIR 37 187 -21 437 304 69 20 chr5 42320716 42320825 -157309325 - MIR SINE MIR -36 226 124 2047 90 0 22 chr5 42320825 42321103 -157309047 - AluSg SINE Alu -4 306 35 437 304 69 20 chr5 42321103 42321197 -157308953 - MIR SINE MIR -138 124 13 207 281 18 18 chr5 42321289 42321346 -157308804 + L2 LINE L2 3124 3180 -92 1323 232 169 23 chr5 42321793 42322409 -157307741 + LTR50 LTR ERVL 1 706 -89 406 156 130 0 chr5 42322417 42322494 -157307656 + 5S rRNA rRNA 2 88 -33 2244 77 20 17 chr5 42325123 42325421 -157304729 - AluSq SINE Alu -14 299 1 349 329 186 0 chr5 42326361 42326571 -157303579 + MIR SINE MIR 6 254 -8 1985 104 36 93 chr5 42326572 42326621 -157303529 - THE1B LTR MaLR 0 364 314 342 0 0 0 chr5 42326621 42326659 -157303491 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 831 176 0 0 chr5 42326659 42326807 -157303343 - FRAM SINE Alu -18 148 1 1985 104 36 93 chr5 42326807 42327142 -157303008 - THE1B LTR MaLR -48 316 1 2334 112 0 0 chr5 42327304 42327607 -157302543 - AluSq SINE Alu -10 303 1 410 319 0 33 chr5 42327898 42328080 -157302070 + MIR SINE MIR 28 203 -59 190 317 0 17 chr5 42328222 42328282 -157301868 + MIR SINE MIR 28 86 -176 2184 114 7 0 chr5 42328449 42328748 -157301402 - AluSq SINE Alu -12 301 1 448 275 25 17 chr5 42328997 42329117 -157301033 + MER5B DNA MER1_type 37 157 -21 255 321 23 23 chr5 42329192 42329323 -157300827 - MIR3 SINE MIR -24 184 54 2168 33 7 0 chr5 42329921 42330194 -157299956 - L1PA4 LINE L1 -263 5892 5618 2002 45 0 0 chr5 42330194 42330438 -157299712 + L1PA4 LINE L1 5911 6155 0 216 210 16 0 chr5 42330444 42330506 -157299644 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 2153 113 3 22 chr5 42330591 42330909 -157299241 - AluSx SINE Alu 0 312 1 1989 105 59 0 chr5 42333245 42333531 -157296619 - AluSg SINE Alu -7 303 1 414 288 102 19 chr5 42338433 42338638 -157291512 - L2 LINE L2 -1 3312 3091 231 169 65 65 chr5 42338767 42338844 -157291306 - MIR SINE MIR -111 151 75 408 301 68 30 chr5 42340890 42341023 -157289127 - L2 LINE L2 -20 3252 3115 1792 89 24 0 chr5 42343189 42343437 -157286713 + L1PA7 LINE L1 5901 6154 0 224 298 169 16 chr5 42345032 42345156 -157284994 - MIR SINE MIR -118 144 2 192 371 133 9 chr5 42345274 42345379 -157284771 - MIR SINE MIR -131 131 14 230 220 60 0 chr5 42345514 42345564 -157284586 + MIR SINE MIR 54 106 -156 395 217 322 0 chr5 42346158 42346273 -157283877 - MER5A DNA MER1_type -37 152 1 570 295 74 11 chr5 42347482 42347672 -157282478 - MIR SINE MIR -50 212 11 1764 142 0 47 chr5 42347901 42348225 -157281925 + AluSx SINE Alu 1 310 0 306 0 0 0 chr5 42350598 42350632 -157279518 + (CA)n Simple_repeat Simple_repeat 2 35 0 272 304 67 28 chr5 42354536 42354583 -157275567 + L1MC4a LINE L1 5636 5680 -2128 2069 89 48 20 chr5 42354583 42354875 -157275275 - AluSg1 SINE Alu -9 300 1 272 304 67 28 chr5 42354875 42355080 -157275070 + L1MC4a LINE L1 5680 5898 -1910 404 250 29 103 chr5 42355479 42355606 -157274544 - MER5A DNA MER1_type 0 189 81 2455 55 7 3 chr5 42355606 42355916 -157274234 - AluY SINE Alu 0 311 1 404 250 29 103 chr5 42355916 42355992 -157274158 - MER5A DNA MER1_type -108 81 1 1464 101 0 41 chr5 42356009 42356228 -157273922 + AluSc SINE Alu 97 306 -3 194 250 0 0 chr5 42356821 42356861 -157273289 - MIR SINE MIR -129 79 40 515 281 6 121 chr5 42356935 42357266 -157272884 + L3 LINE CR1 1036 1328 -249 396 186 133 0 chr5 42357273 42357386 -157272764 + MLT1C LTR MaLR 6 133 -334 412 332 133 15 chr5 42357485 42357681 -157272469 + MIR SINE MIR 23 241 -21 354 301 113 5 chr5 42357747 42357950 -157272200 + L1ME LINE L1 5594 5818 -344 724 240 143 10 chr5 42358273 42358469 -157271681 - MIR SINE MIR -38 224 3 1470 102 0 0 chr5 42358647 42358833 -157271317 - AluSg1 SINE Alu -123 186 1 214 164 36 0 chr5 42359134 42359189 -157270961 + (TG)n Simple_repeat Simple_repeat 2 58 0 223 240 0 20 chr5 42359846 42359896 -157270254 + CT-rich Low_complexity Low_complexity 1 49 0 237 65 0 0 chr5 42359903 42359934 -157270216 + (CA)n Simple_repeat Simple_repeat 1 31 0 456 268 51 19 chr5 42360004 42360161 -157269989 + MER63A DNA MER1_type 49 210 0 515 343 91 8 chr5 42360361 42360603 -157269547 + MIR SINE MIR 1 262 0 1393 274 44 27 chr5 42360809 42361315 -157268835 + L2 LINE L2 2555 3064 -249 1541 230 78 16 chr5 42361315 42361749 -157268401 + MLT1C LTR MaLR 7 467 0 195 215 139 25 chr5 42361756 42361835 -157268315 + L2 LINE L2 3061 3148 -165 384 239 151 71 chr5 42362322 42362562 -157267588 + L1MC5 LINE L1 7311 7530 -431 2148 119 3 0 chr5 42362562 42362855 -157267295 + AluSx SINE Alu 2 295 -17 384 239 151 71 chr5 42362855 42363192 -157266958 + L1MC5 LINE L1 7530 7934 -27 375 78 0 0 chr5 42363218 42363269 -157266881 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 685 174 0 0 chr5 42364177 42364286 -157265864 + AluJb SINE Alu 179 287 -25 318 239 22 43 chr5 42364287 42364379 -157265771 - L1MC4 LINE L1 -1339 6703 6614 2185 124 28 36 chr5 42364383 42364747 -157265403 + THE1B LTR MaLR 4 364 0 203 368 26 26 chr5 42364750 42364867 -157265283 - MIR SINE MIR -62 200 84 304 127 48 0 chr5 42365814 42365877 -157264273 + GA-rich Low_complexity Low_complexity 4 69 0 213 121 0 0 chr5 42367294 42367327 -157262823 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 22 80 0 0 chr5 42367334 42367384 -157262766 + AT_rich Low_complexity Low_complexity 1 50 0 1575 155 18 129 chr5 42367397 42367783 -157262367 + MER7A DNA MER2_type 1 341 -5 1756 132 7 43 chr5 42368028 42368331 -157261819 - AluSx SINE Alu -20 292 1 180 0 0 0 chr5 42368970 42368990 -157261160 + (TA)n Simple_repeat Simple_repeat 2 21 0 1849 155 0 20 chr5 42369058 42369355 -157260795 + AluJb SINE Alu 1 291 -21 321 135 0 0 chr5 42369356 42369408 -157260742 + (TA)n Simple_repeat Simple_repeat 1 52 0 247 233 47 0 chr5 42369413 42369499 -157260651 - L1MC4 LINE L1 -1339 6703 6614 238 255 0 43 chr5 42369423 42369517 -157260633 + L1MC4 LINE L1 6614 6703 -1339 * 226 274 55 0 chr5 42369499 42369572 -157260578 - L1MC4 LINE L1 -1349 6693 6617 * 366 183 0 0 chr5 42369575 42369646 -157260504 + (TA)n Simple_repeat Simple_repeat 2 72 0 322 297 41 41 chr5 42370342 42370487 -157259663 + HAL1 LINE L1 2307 2451 -56 325 316 39 124 chr5 42370787 42371142 -157259008 + L2 LINE L2 2948 3272 0 468 232 83 18 chr5 42371269 42371437 -157258713 + MER104 DNA MER2_type 2 180 0 1239 106 252 0 chr5 42372426 42372682 -157257468 - AluSx SINE Alu 0 313 1 1706 215 65 70 chr5 42373007 42373564 -157256586 - MLT2B3 LTR ERVL 0 554 1 2054 98 0 0 chr5 42373687 42373952 -157256198 - AluSx SINE Alu -45 267 3 189 189 47 9 chr5 42374820 42374926 -157255224 + (TA)n Simple_repeat Simple_repeat 2 111 0 401 344 172 0 chr5 42374938 42375165 -157254985 + L3 LINE CR1 1304 1569 -8 1146 189 65 119 chr5 42375469 42375881 -157254269 + MLT1C LTR MaLR 1 467 0 195 42 0 0 chr5 42375958 42375982 -157254168 + (CA)n Simple_repeat Simple_repeat 1 24 0 494 297 21 81 chr5 42376083 42376416 -157253734 - L1MC4 LINE L1 -1962 5846 5534 1502 96 0 19 chr5 42376762 42376970 -157253180 - AluY SINE Alu -10 301 98 358 219 26 3 chr5 42378651 42378740 -157251410 + L1MC/D LINE L1 5680 5766 -400 192 406 83 0 chr5 42379216 42379349 -157250801 - MIR3 SINE MIR -2 206 63 2201 66 10 7 chr5 42379831 42380151 -157249999 - AluY SINE Alu 0 321 1 1175 302 63 2 chr5 42382697 42383108 -157247042 + L2 LINE L2 2169 2604 -710 2006 122 7 0 chr5 42383177 42383494 -157246656 + AluSc SINE Alu 1 319 0 310 395 59 9 chr5 42383531 42383791 -157246359 + L2 LINE L2 2787 3054 -259 1161 284 91 30 chr5 42383796 42384268 -157245882 - LTR33A LTR ERVL 0 523 23 280 258 45 45 chr5 42384397 42384486 -157245664 + L2 LINE L2 3221 3309 -4 33 43 0 0 chr5 42384905 42384952 -157245198 + AT_rich Low_complexity Low_complexity 1 47 0 309 291 115 64 chr5 42385155 42385389 -157244761 - L3b LINE CR1 -27 1556 1311 603 288 107 17 chr5 42385930 42386163 -157243987 - MIR SINE MIR -1 261 8 318 106 0 0 chr5 42386869 42386916 -157243234 + (TA)n Simple_repeat Simple_repeat 2 48 0 189 121 0 0 chr5 42386943 42386976 -157243174 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 184 338 97 28 chr5 42387119 42387264 -157242886 + L2 LINE L2 2907 3061 -252 381 235 181 72 chr5 42388140 42388361 -157241789 - MIR SINE MIR -10 252 8 448 258 182 0 chr5 42388361 42388493 -157241657 + MER5A DNA MER1_type 33 188 -1 2323 88 0 3 chr5 42388773 42389069 -157241081 + AluSc SINE Alu 1 295 -14 1926 138 13 7 chr5 42389903 42390208 -157239942 + AluJb SINE Alu 1 307 -5 367 313 0 0 chr5 42390318 42390417 -157239733 - L2 LINE L2 -8 3305 3207 298 245 90 75 chr5 42390454 42390642 -157239508 + L2 LINE L2 3123 3313 0 27 29 0 0 chr5 42390777 42390811 -157239339 + AT_rich Low_complexity Low_complexity 1 34 0 385 219 8 62 chr5 42391139 42391267 -157238883 + MER103 DNA DNA 2 122 -44 182 279 87 48 chr5 42391488 42391592 -157238558 - L2 LINE L2 -3 3269 3162 282 243 68 0 chr5 42391710 42391784 -157238366 - MIR SINE MIR -110 98 20 219 288 51 68 chr5 42392144 42392262 -157237888 - MIR3 SINE MIR -11 197 82 356 273 27 0 chr5 42392470 42392580 -157237570 - MIR SINE MIR -142 120 8 408 321 11 60 chr5 42392704 42392969 -157237181 - MARNA DNA Mariner -8 578 327 5076 139 25 5 chr5 42393569 42394402 -157235748 + L1PA16 LINE L1 5317 6166 0 23 33 0 0 chr5 42394944 42394974 -157235176 + AT_rich Low_complexity Low_complexity 1 30 0 195 256 215 6 chr5 42396034 42396136 -157234014 - MER5B DNA MER1_type -68 121 1 564 241 84 12 chr5 42396153 42396319 -157233831 - MER5B DNA MER1_type 0 178 1 1026 226 110 28 chr5 42397588 42397907 -157232243 - MER2 DNA MER2_type 0 345 1 232 200 0 0 chr5 42398094 42398139 -157232011 - L2 LINE L2 0 3313 3269 396 338 89 24 chr5 42398871 42399084 -157231066 + MIR SINE MIR 17 243 -19 1215 258 130 17 chr5 42399674 42400494 -157229656 - L2 LINE L2 0 3313 2411 249 316 32 42 chr5 42400759 42400854 -157229296 + MER5B DNA MER1_type 64 157 -21 399 320 28 6 chr5 42401105 42401283 -157228867 + MER117 DNA MER1_type 14 195 -2 214 178 0 22 chr5 42402662 42402707 -157227443 + (CATA)n Simple_repeat Simple_repeat 3 46 0 441 0 0 0 chr5 42402707 42402756 -157227394 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 369 58 0 0 chr5 42403574 42403626 -157226524 + (TA)n Simple_repeat Simple_repeat 2 53 0 956 260 71 57 chr5 42404699 42405371 -157224779 - L1ME1 LINE L1 -217 5949 5240 204 97 0 0 chr5 42405371 42405402 -157224748 + (TG)n Simple_repeat Simple_repeat 2 32 0 25 90 0 0 chr5 42405404 42405471 -157224679 + AT_rich Low_complexity Low_complexity 1 67 0 2542 26 7 13 chr5 42406225 42406532 -157223618 - AluY SINE Alu -6 305 1 413 123 0 31 chr5 42407448 42407513 -157222637 + AluS SINE Alu 227 289 -23 36 0 0 0 chr5 42407513 42407549 -157222601 + AT_rich Low_complexity Low_complexity 1 36 0 484 275 66 109 chr5 42407921 42408132 -157222018 - MIR SINE MIR -39 223 22 211 211 28 55 chr5 42408179 42408288 -157221862 + A-rich Low_complexity Low_complexity 3 108 0 720 138 0 166 chr5 42410861 42411078 -157219072 + MER96B DNA MER1_type? 1 181 -236 22 0 0 0 chr5 42411941 42411963 -157218187 + AT_rich Low_complexity Low_complexity 1 22 0 188 278 74 0 chr5 42412648 42412702 -157217448 + L2 LINE L2 3214 3271 -1 180 0 0 0 chr5 42412770 42412790 -157217360 + (T)n Simple_repeat Simple_repeat 1 20 0 459 301 63 0 chr5 42413033 42413176 -157216974 - MIR SINE MIR -1 261 110 400 230 0 0 chr5 42413365 42413439 -157216711 + L1ME LINE L1 11 84 -6775 28 0 0 0 chr5 42413473 42413501 -157216649 + AT_rich Low_complexity Low_complexity 1 28 0 261 132 21 79 chr5 42413507 42413697 -157216453 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 253 178 55 41 chr5 42413709 42413855 -157216295 + (TATAA)n Simple_repeat Simple_repeat 5 152 0 345 71 15 116 chr5 42413867 42414065 -157216085 + (TTATA)n Simple_repeat Simple_repeat 1 178 0 41 21 0 0 chr5 42414065 42414113 -157216037 + AT_rich Low_complexity Low_complexity 1 48 0 6770 231 56 25 chr5 42414213 42416446 -157213704 + L1ME LINE L1 3716 6016 -941 390 325 36 0 chr5 42416589 42416783 -157213367 + L1ME LINE L1 6373 6573 -359 22 35 0 0 chr5 42417422 42417451 -157212699 + AT_rich Low_complexity Low_complexity 1 29 0 941 217 5 0 chr5 42418325 42418509 -157211641 - MER5A DNA MER1_type -3 186 2 2015 122 3 3 chr5 42419776 42420102 -157210048 + AluSq SINE Alu 1 326 0 519 230 96 86 chr5 42420133 42420234 -157209916 + MIR SINE MIR 52 151 -111 2322 102 3 0 chr5 42420234 42420539 -157209611 - AluSx SINE Alu -6 306 1 519 230 96 86 chr5 42420539 42420646 -157209504 + MIR SINE MIR 151 262 0 472 308 25 0 chr5 42420669 42420789 -157209361 + L2 LINE L2 3150 3272 0 925 198 49 21 chr5 42420931 42421174 -157208976 + LTR23 LTR ERV1 161 410 -27 406 300 15 8 chr5 42421629 42421759 -157208391 + MIR SINE MIR 31 161 -101 1712 184 3 10 chr5 42422894 42423204 -157206946 + AluJo SINE Alu 1 308 -4 1710 171 4 11 chr5 42423260 42423712 -157206438 - AluJb SINE Alu 0 454 5 287 340 100 0 chr5 42423756 42423856 -157206294 + L2 LINE L2 3163 3272 0 1231 272 80 53 chr5 42423907 42424356 -157205794 + LTR16B LTR ERVL 2 462 -2 23 0 0 0 chr5 42425532 42425555 -157204595 + AT_rich Low_complexity Low_complexity 1 23 0 342 0 0 0 chr5 42425685 42425723 -157204427 + (TG)n Simple_repeat Simple_repeat 2 39 0 230 286 29 43 chr5 42426301 42426371 -157203779 + MER5A DNA MER1_type 51 119 -70 220 321 25 12 chr5 42426855 42426936 -157203214 + MIR3 SINE MIR 121 202 -6 2116 197 17 38 chr5 42427800 42428277 -157201873 - MLT1C LTR MaLR 0 467 1 1820 133 56 0 chr5 42428313 42428583 -157201567 - AluJb SINE Alu -27 285 1 188 349 36 36 chr5 42429267 42429350 -157200800 - L2 LINE L2 -2 3270 3188 184 307 34 91 chr5 42430908 42430996 -157199154 - L2 LINE L2 -89 3183 3101 232 338 150 8 chr5 42430998 42431131 -157199019 + MIR3 SINE MIR 9 160 -48 440 211 140 0 chr5 42431131 42431245 -157198905 - MER113 DNA MER1_type? 0 521 392 261 244 32 16 chr5 42431397 42431520 -157198630 - MER113 DNA MER1_type? -393 128 4 308 253 48 0 chr5 42433719 42433802 -157196348 + MIR SINE MIR 106 192 -70 2645 113 0 0 chr5 42433915 42434279 -157195871 - THE1B LTR MaLR 0 364 1 1553 71 9 0 chr5 42434667 42434877 -157195273 + L1PA7 LINE L1 5943 6154 0 270 231 0 0 chr5 42435239 42435291 -157194859 + L2 LINE L2 3221 3272 0 387 270 11 0 chr5 42436307 42436396 -157193754 - MER81 DNA DNA -24 90 1 533 236 176 7 chr5 42436413 42436561 -157193589 - MER5A DNA MER1_type -13 176 4 * 706 273 123 0 chr5 42436561 42436781 -157193369 + MIR SINE MIR 15 262 0 446 271 98 35 chr5 42437191 42437394 -157192756 + MIR SINE MIR 47 262 0 234 0 0 0 chr5 42438544 42438570 -157191580 + (A)n Simple_repeat Simple_repeat 1 26 0 613 254 68 6 chr5 42438749 42438926 -157191224 - MIR SINE MIR -65 197 10 290 358 73 28 chr5 42439350 42439529 -157190621 + MIR3 SINE MIR 19 205 -3 591 295 60 30 chr5 42489934 42490134 -157140016 - MIR SINE MIR -49 213 8 513 246 37 0 chr5 42490296 42490430 -157139720 + MIR3 SINE MIR 60 198 -10 318 26 0 0 chr5 42490637 42490676 -157139474 + (T)n Simple_repeat Simple_repeat 1 39 0 514 325 133 21 chr5 42491197 42491572 -157138578 + L2 LINE L2 2804 3220 -93 1852 116 34 27 chr5 42491923 42492215 -157137935 - AluSg SINE Alu -16 294 1 840 312 43 4 chr5 42494456 42494687 -157135463 - MIR SINE MIR -4 258 19 240 180 16 16 chr5 42495722 42495783 -157134367 + (TA)n Simple_repeat Simple_repeat 2 62 0 2230 79 0 0 chr5 42496797 42497087 -157133063 - AluSg SINE Alu -20 290 1 349 315 22 0 chr5 42498342 42498434 -157131716 + MIR SINE MIR 36 129 -79 261 0 0 0 chr5 42499402 42499431 -157130719 + (TG)n Simple_repeat Simple_repeat 1 29 0 1028 203 75 98 chr5 42499536 42499871 -157130279 + MLT2D LTR ERVL 83 409 -5 1285 275 48 18 chr5 42499963 42500400 -157129750 - LTR16A LTR ERVL 0 450 1 1269 272 81 25 chr5 42500409 42500879 -157129271 + MLT1J LTR MaLR 8 503 -8 1542 184 21 23 chr5 42500884 42501303 -157128847 + Tigger5 DNA MER2_type 2 2323 0 1963 226 149 13 chr5 42502009 42502531 -157127619 + MLT1E LTR MaLR 1 593 0 765 299 42 0 chr5 42502918 42503135 -157127015 + MIR SINE MIR 25 250 -12 958 209 6 0 chr5 42503288 42503465 -157126685 - MER5B DNA MER1_type 0 178 1 544 276 99 0 chr5 42503686 42503838 -157126312 - MIR SINE MIR -17 245 79 190 276 132 13 chr5 42503912 42503988 -157126162 + MIR3 SINE MIR 117 201 -7 414 252 43 29 chr5 42505045 42505184 -157124966 - MER5B DNA MER1_type -1 177 37 1646 169 7 19 chr5 42505184 42505492 -157124658 + AluJo SINE Alu 1 304 -8 270 184 20 0 chr5 42505511 42505560 -157124590 - MER5B DNA MER1_type -128 50 1 277 318 12 0 chr5 42505989 42506074 -157124076 + CT-rich Low_complexity Low_complexity 1 86 0 586 338 36 42 chr5 42506395 42506703 -157123447 + L3 LINE CR1 340 645 -932 1480 246 96 40 chr5 42506870 42507390 -157122760 + MLT1H LTR MaLR 1 549 0 392 304 75 104 chr5 42507396 42507877 -157122273 + L2 LINE L2 2806 3272 0 1955 149 71 31 chr5 42507920 42508270 -157121880 - THE1B LTR MaLR 0 364 1 524 340 85 28 chr5 42508659 42508941 -157121209 + L3 LINE CR1 1218 1515 -62 461 281 8 16 chr5 42509189 42509317 -157120833 - L2 LINE L2 -12 3301 3175 335 248 0 48 chr5 42509369 42509474 -157120676 + LTR67 LTR ERVL 457 556 -1 21 0 0 0 chr5 42509755 42509776 -157120374 + AT_rich Low_complexity Low_complexity 1 21 0 325 278 40 66 chr5 42510808 42510959 -157119191 + MIR3 SINE MIR 56 202 -6 4124 123 59 75 chr5 42511175 42511973 -157118177 - LTR1 LTR ERV1 0 785 1 1697 100 20 15 chr5 42512146 42512617 -157117533 - MER4A LTR ERV1 0 664 35 2225 60 0 7 chr5 42514474 42514782 -157115368 + AluSx SINE Alu 1 306 0 580 230 235 14 chr5 42514953 42515166 -157114984 + MIR SINE MIR 3 262 0 771 61 0 0 chr5 42515377 42515475 -157114675 + L1PA5 LINE L1 6057 6154 0 238 182 0 0 chr5 42515475 42515519 -157114631 + Charlie2 DNA MER1_type 2819 2862 0 648 314 67 37 chr5 42516835 42517430 -157112720 + L1ME3A LINE L1 4574 5186 -960 1329 160 23 0 chr5 42517433 42517652 -157112498 + AluJb SINE Alu 83 306 -6 1250 271 117 27 chr5 42517652 42518249 -157111901 + L1ME3A LINE L1 5179 5854 -316 2247 106 0 3 chr5 42518249 42518541 -157111609 + AluSx SINE Alu 1 291 -21 1250 271 117 27 chr5 42518541 42518649 -157111501 + L1ME3A LINE L1 5854 5951 -219 1132 256 55 28 chr5 42518882 42519281 -157110869 - L1MD2 LINE L1 -10 6349 5940 2250 91 10 7 chr5 42519321 42519617 -157110533 - AluY SINE Alu -14 297 1 447 19 0 0 chr5 42519669 42519721 -157110429 + (CA)n Simple_repeat Simple_repeat 1 52 0 247 294 31 19 chr5 42519959 42520119 -157110031 - L1M4 LINE L1 -2904 3242 3081 226 239 239 0 chr5 42521197 42521289 -157108861 + LTR33 LTR ERVL 1 114 -407 304 227 121 0 chr5 42521306 42521372 -157108778 + LTR16A LTR ERVL 365 438 -12 2021 265 112 37 chr5 42521382 42522187 -157107963 - HAL1 LINE L1 -37 2470 1606 256 150 0 0 chr5 42522633 42522673 -157107477 + L1MC4 LINE L1 5784 5823 -1985 * 802 131 16 0 chr5 42522641 42522763 -157107387 + L1PA13 LINE L1 5794 5917 -246 1449 136 0 0 chr5 42522763 42522961 -157107189 + AluSg/x SINE Alu 86 283 -29 2022 70 15 11 chr5 42522978 42523248 -157106902 + L1PA13 LINE L1 5893 6163 0 251 254 15 0 chr5 42523305 42523372 -157106778 + (TA)n Simple_repeat Simple_repeat 1 68 0 234 286 12 12 chr5 42523537 42523621 -157106529 - LTR33 LTR ERVL -48 473 390 2895 161 46 5 chr5 42523629 42524584 -157105566 + L1M2 LINE L1 4741 5789 -523 239 203 101 0 chr5 42524589 42524658 -157105492 + L1MCa LINE L1 1995 2070 -4356 232 161 161 0 chr5 42524668 42524724 -157105426 + L1MCa LINE L1 2006 2070 -4356 232 242 0 63 chr5 42524746 42524841 -157105309 + L1MC4 LINE L1 6615 6703 -1339 360 286 13 9 chr5 42524849 42525085 -157105065 + (CATATA)n Simple_repeat Simple_repeat 1 236 0 461 308 0 0 chr5 42525089 42525410 -157104740 + (TA)n Simple_repeat Simple_repeat 1 321 0 234 214 56 45 chr5 42525455 42525544 -157104606 - L1MC4 LINE L1 -1339 6703 6614 * 299 264 0 22 chr5 42525530 42525621 -157104529 + L1MC4 LINE L1 6614 6702 -1340 759 237 36 47 chr5 42525631 42525884 -157104266 + pTR5 LTR ERV1 743 992 -1446 5623 80 12 118 chr5 42525971 42526895 -157103255 + LTR12 LTR ERV1 1 826 0 189 269 0 0 chr5 42526895 42526962 -157103188 + (TA)n Simple_repeat Simple_repeat 1 67 0 236 344 0 0 chr5 42526996 42527086 -157103064 + L1MC4 LINE L1 6614 6703 -1339 548 380 0 0 chr5 42527093 42527321 -157102829 + (CGTG)n Simple_repeat Simple_repeat 1 228 0 2495 166 69 14 chr5 42527377 42527872 -157102278 + L1MA9 LINE L1 5778 6299 -13 24 0 0 0 chr5 42527872 42527896 -157102254 + AT_rich Low_complexity Low_complexity 1 24 0 1902 161 20 0 chr5 42527917 42528043 -157102107 + AluSx SINE Alu 1 123 -189 333 0 0 0 chr5 42528043 42528080 -157102070 + (CA)n Simple_repeat Simple_repeat 2 38 0 1902 161 20 0 chr5 42528080 42528252 -157101898 + AluSx SINE Alu 123 305 -7 837 60 0 0 chr5 42528415 42528531 -157101619 + (CCA)n Simple_repeat Simple_repeat 2 117 0 25 31 0 0 chr5 42528881 42528913 -157101237 + AT_rich Low_complexity Low_complexity 1 32 0 711 245 17 33 chr5 42529132 42529373 -157100777 + L1MC5 LINE L1 7689 7925 -36 2341 97 0 3 chr5 42530529 42530838 -157099312 - AluSc SINE Alu -1 308 1 245 304 148 22 chr5 42530849 42530984 -157099166 + MLT1I LTR MaLR 18 169 -240 233 187 77 110 chr5 42531158 42531229 -157098921 + MLT1H LTR MaLR 446 515 -34 1337 205 64 53 chr5 42531229 42531590 -157098560 + MLT1A1 LTR MaLR 1 365 0 233 187 77 110 chr5 42531590 42531609 -157098541 + MLT1H LTR MaLR 515 533 -16 1530 186 26 42 chr5 42531771 42532087 -157098063 + MLT1A1 LTR MaLR 11 584 -42 258 318 24 63 chr5 42532154 42532280 -157097870 - LTR67 LTR ERVL -338 219 99 483 237 90 32 chr5 42533112 42533268 -157096882 + MLT1J LTR MaLR 3 167 -344 273 276 17 52 chr5 42533332 42533443 -157096707 + MLT1J LTR MaLR 376 482 -29 1225 267 55 32 chr5 42533443 42533968 -157096182 + MER34 LTR ERV1 1 537 -5 290 292 169 8 chr5 42534284 42534414 -157095736 + MIR SINE MIR 29 179 -83 413 208 240 8 chr5 42534462 42534587 -157095563 - MER69 DNA AcHobo -1072 154 1 374 284 155 7 chr5 42534628 42534776 -157095374 - MER91A DNA MER1_type 0 196 27 331 346 49 43 chr5 42534789 42534951 -157095199 + MER91A DNA MER1_type 14 176 -20 2661 131 85 7 chr5 42535340 42535789 -157094361 + MER31A LTR ERV1 1 484 -1 1074 38 16 33 chr5 42536029 42536212 -157093938 + (TC)n Simple_repeat Simple_repeat 1 180 0 967 58 40 6 chr5 42536236 42536410 -157093740 + (TC)n Simple_repeat Simple_repeat 1 180 0 319 199 0 31 chr5 42536608 42536699 -157093451 - L1ME LINE L1 -567 5554 5470 584 236 158 4 chr5 42537439 42537680 -157092470 - L1ME4a LINE L1 -74 6047 5770 519 265 197 18 chr5 42537732 42538021 -157092129 + MLT1J2 LTR MaLR 44 385 -65 2224 115 0 7 chr5 42538253 42538557 -157091593 - AluSq SINE Alu -11 302 1 1937 174 0 0 chr5 42538599 42538903 -157091247 + AluJb SINE Alu 1 304 -8 42 20 0 0 chr5 42539254 42539303 -157090847 + AT_rich Low_complexity Low_complexity 1 49 0 184 327 36 0 chr5 42539313 42539368 -157090782 + L2 LINE L2 15 71 -3243 2273 113 7 0 chr5 42539381 42539681 -157090469 - AluSq SINE Alu -11 302 1 319 241 55 90 chr5 42540507 42540652 -157089498 + L2 LINE L2 3174 3313 0 240 285 181 27 chr5 42540927 42541148 -157089002 - L1MC/D LINE L1 -1898 5910 5656 2159 113 3 0 chr5 42541252 42541545 -157088605 - AluSx SINE Alu -18 294 1 2465 271 68 50 chr5 42542352 42544256 -157085894 + L1ME LINE L1 8 1971 -4109 780 179 0 15 chr5 42544266 42544400 -157085750 + FLAM_A SINE Alu 10 141 -1 572 233 20 51 chr5 42544401 42544654 -157085496 + L1ME LINE L1 1996 2240 -4021 2183 180 50 61 chr5 42545222 42545257 -157084893 + LTR45B LTR ERV1 1 35 -748 1806 108 58 11 chr5 42545257 42545535 -157084615 - L1PA15 LINE L1 0 6165 5875 2183 180 50 61 chr5 42545535 42545999 -157084151 + LTR45B LTR ERV1 35 783 0 1744 169 14 0 chr5 42546209 42546488 -157083662 + AluJb SINE Alu 1 283 -29 193 291 64 82 chr5 42546872 42546982 -157083168 - L2 LINE L2 -802 2512 2405 2287 84 10 3 chr5 42547339 42547681 -157082469 + AluY SINE Alu 1 311 0 1539 206 82 20 chr5 42547852 42548255 -157081895 - MLT1C LTR MaLR 0 467 40 2524 53 3 0 chr5 42549217 42549519 -157080631 + AluY SINE Alu 1 303 -8 307 195 81 35 chr5 42550986 42551073 -157079077 - MIR SINE MIR -134 128 38 215 241 19 0 chr5 42551120 42551174 -157078976 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 189 306 139 19 chr5 42551335 42551473 -157078677 + MIR SINE MIR 14 164 -68 * 748 217 150 24 chr5 42551470 42551677 -157078473 - MIR SINE MIR -25 237 5 272 207 310 9 chr5 42551877 42551993 -157078157 - L3 LINE CR1 -109 1468 1318 271 323 111 30 chr5 42552871 42552964 -157077186 - L1MC4a LINE L1 -1904 5904 5820 1787 166 0 13 chr5 42552964 42553266 -157076884 - AluJo SINE Alu -14 298 1 271 323 111 30 chr5 42553266 42553469 -157076681 - L1MC4a LINE L1 -1988 5820 5584 293 256 128 69 chr5 42553473 42553848 -157076302 - L1MC4a LINE L1 -1174 4972 4576 558 332 9 18 chr5 42553935 42554152 -157075998 + MIR SINE MIR 42 256 -6 550 245 197 0 chr5 42554287 42554434 -157075716 - MER5A DNA MER1_type -1 188 13 202 206 0 0 chr5 42554571 42554605 -157075545 + polypyrimidine Low_complexity Low_complexity 3 36 0 438 305 58 0 chr5 42555533 42555723 -157074427 - LTR16B LTR ERVL -3 461 261 448 293 88 71 chr5 42555875 42555905 -157074245 - L1MC4a LINE L1 -1904 5904 5876 2385 133 30 25 chr5 42555905 42556267 -157073883 + THE1B LTR MaLR 1 364 0 448 293 88 71 chr5 42556267 42556872 -157073278 - L1MC4a LINE L1 -1932 5876 5258 2583 46 0 3 chr5 42556901 42557206 -157072944 - AluY SINE Alu -7 304 1 612 323 5 5 chr5 42557496 42557682 -157072468 - MIR SINE MIR -65 197 12 240 282 191 18 chr5 42558853 42558963 -157071187 - L2 LINE L2 -1 3271 3143 1558 286 55 66 chr5 42559383 42560215 -157069935 + L2 LINE L2 2120 2942 -372 303 167 0 83 chr5 42560246 42560318 -157069832 - LTR33 LTR ERVL 0 521 456 724 311 91 12 chr5 42560365 42560696 -157069454 - HsTC2a DNA Tc2 -293 451 95 1591 181 24 3 chr5 42560822 42561115 -157069035 - AluJo SINE Alu -13 299 1 948 127 48 6 chr5 42561670 42561836 -157068314 - L1MA6 LINE L1 0 6300 6128 2251 122 0 0 chr5 42561837 42562141 -157068009 - AluSx SINE Alu -8 304 1 9724 151 33 6 chr5 42562163 42564852 -157065298 - L1MA4A LINE L1 -11 6994 4238 2020 108 14 14 chr5 42564852 42565130 -157065020 - AluSq SINE Alu -19 294 17 484 235 111 0 chr5 42565130 42565283 -157064867 - L1MA4A LINE L1 -3213 3635 3466 6448 62 19 47 chr5 42565291 42566270 -157063880 - SVA Other Other -2 1384 433 5829 54 11 49 chr5 42566328 42567388 -157062762 - SVA Other Other -520 866 1 2224 100 7 0 chr5 42567439 42567729 -157062421 + AluSc SINE Alu 1 292 -17 11128 196 42 73 chr5 42567729 42571295 -157058855 - L1MA4A LINE L1 -3389 3459 2 22 0 0 0 chr5 42571533 42571555 -157058595 + AT_rich Low_complexity Low_complexity 1 22 0 616 246 140 74 chr5 42572331 42572466 -157057684 - MLT1H LTR MaLR -146 403 278 2938 79 3 0 chr5 42572466 42572820 -157057330 + THE1A LTR MaLR 1 355 0 616 246 140 74 chr5 42572820 42573062 -157057088 - MLT1H LTR MaLR -271 278 1 21 0 0 0 chr5 42573742 42573763 -157056387 + AT_rich Low_complexity Low_complexity 1 21 0 1512 70 0 11 chr5 42574427 42574614 -157055536 - AluSg/x SINE Alu -6 304 120 3933 123 40 26 chr5 42574642 42575245 -157054905 - LTR36 LTR ERV1 0 611 1 395 232 46 111 chr5 42575718 42575998 -157054152 - L1ME4a LINE L1 -91 6030 5769 505 284 128 0 chr5 42576118 42576259 -157053891 + MIR3 SINE MIR 19 177 -31 189 378 104 0 chr5 42576450 42576585 -157053565 - L2 LINE L2 0 3272 3124 368 222 60 8 chr5 42576716 42576833 -157053317 - L1ME4a LINE L1 -1 6120 5998 2577 196 27 34 chr5 42577099 42577593 -157052557 - L1MB5 LINE L1 -69 6105 5603 292 170 0 0 chr5 42577593 42577640 -157052510 - Alu SINE Alu -8 294 248 2577 196 27 34 chr5 42577640 42577911 -157052239 - L1MB5 LINE L1 -571 5603 5332 1144 133 25 36 chr5 42577911 42578141 -157052009 - AluJb SINE Alu 0 312 93 729 191 22 11 chr5 42578144 42578327 -157051823 - L1MB5 LINE L1 -813 5333 5149 189 0 0 0 chr5 42578334 42578355 -157051795 + (TTG)n Simple_repeat Simple_repeat 1 21 0 303 313 100 12 chr5 42578885 42579045 -157051105 + MIR SINE MIR 89 262 0 270 289 175 26 chr5 42580069 42580183 -157049967 + MIR3 SINE MIR 76 206 -2 2060 114 0 0 chr5 42583724 42583996 -157046154 - AluSg SINE Alu -11 299 28 21 0 0 0 chr5 42584004 42584025 -157046125 + AT_rich Low_complexity Low_complexity 1 21 0 809 241 17 0 chr5 42586220 42586394 -157043756 - MER58A DNA MER1_type -1 223 47 2078 128 0 0 chr5 42586394 42586676 -157043474 + AluSx SINE Alu 1 282 -30 820 261 73 5 chr5 42586862 42587080 -157043070 - MIR SINE MIR -29 233 1 1295 158 10 5 chr5 42587133 42587336 -157042814 + AluSx SINE Alu 1 204 -108 225 234 63 81 chr5 42587434 42587545 -157042605 + MIR SINE MIR 2 110 -152 435 275 142 18 chr5 42588544 42588778 -157041372 + MIR SINE MIR 5 262 0 862 278 93 34 chr5 42590682 42591227 -157038923 - L1ME3 LINE L1 -197 5924 5346 865 313 61 17 chr5 42591365 42592008 -157038142 - L1MB5 LINE L1 -1047 5099 4429 3498 130 23 50 chr5 42592013 42592630 -157037520 - LTR9B LTR ERV1 0 644 45 548 323 88 42 chr5 42592861 42593474 -157036676 - HAL1b LINE L1 -641 707 67 524 266 137 43 chr5 42593708 42594269 -157035881 - L1MB5 LINE L1 -2797 3349 2736 545 220 68 30 chr5 42594281 42594413 -157035737 + MER5A DNA MER1_type 9 145 -44 2472 210 60 102 chr5 42594424 42595344 -157034806 - MER65-int LTR ERV1 -3567 1304 424 839 318 33 15 chr5 42595445 42595844 -157034306 + L1PA12 LINE L1 10 415 -7166 265 338 36 7 chr5 42596223 42596362 -157033788 + L1M2 LINE L1 689 831 -6018 359 335 65 82 chr5 42596510 42596680 -157033470 + L1M2 LINE L1 901 1067 -5782 1049 284 31 25 chr5 42596890 42597341 -157032809 + L1PA12 LINE L1 1781 2326 -5258 7549 180 47 25 chr5 42597342 42599457 -157030693 + L1PA12 LINE L1 2467 4686 -2898 * 16323 167 22 9 chr5 42599454 42603044 -157027106 - L1M1 LINE L1 -743 6822 3213 2200 114 3 16 chr5 42603050 42603358 -157026792 - AluSg SINE Alu -6 304 1 7316 160 32 10 chr5 42603359 42604606 -157025544 - L1M1 LINE L1 -6275 1290 17 2291 155 63 24 chr5 42604619 42605045 -157025105 - MER65A LTR ERV1 0 445 3 6401 160 21 20 chr5 42605046 42606114 -157024036 - MER70A-int LTR ERVL -2334 2689 1621 5023 170 54 21 chr5 42606114 42607218 -157022932 - MER70A-int LTR ERVL -3832 1191 1 2170 189 25 12 chr5 42607218 42607620 -157022530 - MER70A LTR ERVL 0 472 66 364 180 34 22 chr5 42607693 42607782 -157022368 - L1ME LINE L1 -5905 165 76 197 65 32 0 chr5 42608408 42608439 -157021711 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 211 240 49 0 chr5 42609218 42609293 -157020857 - MIR SINE MIR -63 145 65 2378 80 3 0 chr5 42609311 42609599 -157020551 + AluSg SINE Alu 5 293 -17 569 313 65 5 chr5 42609610 42609824 -157020326 - MIR SINE MIR -21 241 15 473 154 154 0 chr5 42611134 42611238 -157018912 + L1 LINE L1 4124 4243 -1903 16334 214 48 41 chr5 42611238 42614827 -157015323 + L1PA16 LINE L1 101 3662 -3155 2006 112 0 4 chr5 42614827 42615094 -157015056 + AluSg SINE Alu 1 266 -44 16334 214 48 41 chr5 42615094 42617366 -157012784 + L1PA16 LINE L1 3662 5983 -834 2262 100 0 3 chr5 42617366 42617665 -157012485 + AluY SINE Alu 1 298 -13 16334 214 48 41 chr5 42617665 42617816 -157012334 + L1PA16 LINE L1 5983 6131 -686 1010 223 37 8 chr5 42618199 42618441 -157011709 - MLT1B LTR MaLR 0 390 142 4325 116 58 0 chr5 42618425 42619095 -157011055 + L1PA16 LINE L1 6103 6811 -6 987 242 13 17 chr5 42620449 42620680 -157009470 + MIR SINE MIR 33 262 0 187 358 196 7 chr5 42620900 42621048 -157009102 - L2 LINE L2 -1 3271 3096 1252 276 18 63 chr5 42621952 42622430 -157007720 - MER115 DNA AcHobo 0 4031 235 496 136 0 0 chr5 42624776 42624857 -157005293 - MER53 DNA DNA 0 189 109 577 236 51 60 chr5 42625236 42625452 -157004698 - MER58C DNA MER1_type -1 214 1 1844 127 0 0 chr5 42626908 42627168 -157002982 - AluSq SINE Alu -48 265 6 21 0 0 0 chr5 42627484 42627505 -157002645 + AT_rich Low_complexity Low_complexity 1 21 0 233 260 91 0 chr5 42627714 42627791 -157002359 - L1ME LINE L1 -515 5606 5523 342 247 49 0 chr5 42628241 42628359 -157001791 + MIR3 SINE MIR 72 196 -12 2501 111 5 13 chr5 42630438 42630816 -156999334 - THE1C LTR MaLR 0 375 1 9856 96 42 63 chr5 42630816 42632430 -156997720 - THE1C-int LTR MaLR 0 1580 1 2563 102 16 8 chr5 42632430 42632802 -156997348 - THE1C LTR MaLR 0 375 1 753 193 52 57 chr5 42633628 42633867 -156996283 + L1ME LINE L1 5461 5690 -472 2068 114 119 35 chr5 42633879 42634308 -156995842 + MER4C LTR ERV1 1 465 0 1955 115 150 35 chr5 42634756 42635023 -156995127 - MER65A LTR ERV1 0 445 116 405 0 0 0 chr5 42635023 42635068 -156995082 + (TG)n Simple_repeat Simple_repeat 2 46 0 1955 115 150 35 chr5 42635068 42635199 -156994951 - MER65A LTR ERV1 -329 116 1 304 250 12 38 chr5 42635307 42635431 -156994719 - MLT1G LTR MaLR 0 586 431 183 80 0 0 chr5 42635799 42635824 -156994326 + (TTGG)n Simple_repeat Simple_repeat 4 28 0 699 243 115 13 chr5 42636296 42636531 -156993619 - MIR SINE MIR -3 259 1 210 287 79 40 chr5 42638554 42638655 -156991495 + L2 LINE L2 3156 3260 -12 1471 171 4 16 chr5 42638659 42638905 -156991245 - AluSx SINE Alu -69 243 1 2260 114 3 0 chr5 42638928 42639235 -156990915 - AluSq SINE Alu -5 308 1 440 260 27 47 chr5 42639803 42639953 -156990197 + MER5A DNA MER1_type 42 188 -1 410 282 95 21 chr5 42640231 42640472 -156989678 - L1MC5 LINE L1 -60 7901 7643 2187 70 7 3 chr5 42641147 42641434 -156988716 - AluY SINE Alu -23 288 1 21 36 0 0 chr5 42642583 42642611 -156987539 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chr5 42644232 42644256 -156985894 + (A)n Simple_repeat Simple_repeat 1 24 0 36 23 0 0 chr5 42645642 42645685 -156984465 + AT_rich Low_complexity Low_complexity 1 43 0 1368 195 30 50 chr5 42646554 42646857 -156983293 - AluJo SINE Alu -15 297 1 2300 116 3 0 chr5 42647633 42647944 -156982206 + AluSx SINE Alu 1 312 0 2014 138 58 5 chr5 42648053 42648430 -156981720 - Charlie1 DNA MER1_type -8 2753 2357 26 0 0 0 chr5 42651942 42651968 -156978182 + AT_rich Low_complexity Low_complexity 1 26 0 187 229 0 83 chr5 42652240 42652288 -156977862 - L2 LINE L2 -15 3257 3214 205 213 128 0 chr5 42652699 42652746 -156977404 - MIR3 SINE MIR -48 160 108 224 181 0 191 chr5 42653028 42653122 -156977028 - MIR SINE MIR -3 259 184 573 151 40 151 chr5 42655518 42655717 -156974433 + MER104 DNA MER2_type 1 177 -3 28 29 0 0 chr5 42657683 42657718 -156972432 + AT_rich Low_complexity Low_complexity 1 35 0 610 328 42 0 chr5 42657822 42658014 -156972136 + MIR SINE MIR 48 247 -15 1481 150 122 0 chr5 42659141 42659435 -156970715 + MER46B DNA MER2_type 32 236 0 313 351 157 39 chr5 42659944 42660562 -156969588 + L2 LINE L2 2197 2887 -427 1928 142 14 3 chr5 42662057 42662353 -156967797 + AluSx SINE Alu 1 299 -13 24 32 0 0 chr5 42662727 42662758 -156967392 + AT_rich Low_complexity Low_complexity 1 31 0 736 114 79 0 chr5 42663492 42663632 -156966518 - L1MA9 LINE L1 0 6312 6162 388 277 85 21 chr5 42664221 42664362 -156965788 - MIR SINE MIR -74 188 39 2095 118 17 91 chr5 42664790 42665195 -156964955 + THE1C LTR MaLR 1 375 0 217 235 0 0 chr5 42665608 42665659 -156964491 + (CAATT)n Simple_repeat Simple_repeat 4 54 0 23 0 0 0 chr5 42666530 42666553 -156963597 + AT_rich Low_complexity Low_complexity 1 23 0 378 328 26 5 chr5 42667416 42667605 -156962545 - L1M4 LINE L1 -1072 5074 4882 26 0 0 0 chr5 42667623 42667649 -156962501 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 42668340 42668362 -156961788 + AT_rich Low_complexity Low_complexity 1 22 0 217 0 61 0 chr5 42670205 42670238 -156959912 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1942 158 0 3 chr5 42670903 42671201 -156958949 - AluSx SINE Alu -14 298 2 6235 134 47 60 chr5 42672238 42672595 -156957555 + Tigger3b DNA MER2_type 1 361 -2667 1617 146 31 8 chr5 42672595 42672856 -156957294 + AluJo SINE Alu 33 299 -13 6235 134 47 60 chr5 42672856 42673067 -156957083 + Tigger3b DNA MER2_type 361 573 -2455 2281 75 10 7 chr5 42673067 42673373 -156956777 - AluSx SINE Alu -5 307 1 6235 134 47 60 chr5 42673373 42673768 -156956382 + Tigger3b DNA MER2_type 573 948 -2080 2364 67 7 0 chr5 42673768 42674067 -156956083 - AluY SINE Alu -10 301 1 6235 134 47 60 chr5 42674067 42674347 -156955803 + Tigger3b DNA MER2_type 948 1230 -1 206 309 0 85 chr5 42674464 42674558 -156955592 - MIR SINE MIR -157 105 20 2100 84 0 74 chr5 42675110 42675433 -156954717 - AluSq SINE Alu -14 299 1 2312 76 0 33 chr5 42675476 42675780 -156954370 - AluSg SINE Alu -14 296 3 26 0 0 0 chr5 42675902 42675928 -156954222 + AT_rich Low_complexity Low_complexity 1 26 0 2811 237 35 30 chr5 42676568 42677371 -156952779 + L1ME2 LINE L1 5348 6154 -10 319 260 95 85 chr5 42677431 42677631 -156952519 + L1MC4 LINE L1 7830 8031 -11 1945 102 0 0 chr5 42678152 42678406 -156951744 - AluSx SINE Alu -13 299 46 313 51 0 0 chr5 42679066 42679105 -156951045 + MADE1 DNA Mariner 8 46 -34 1109 244 153 11 chr5 42681192 42681706 -156948444 + MLT1E2 LTR MaLR 14 624 0 1937 88 51 11 chr5 42681910 42682183 -156947967 - AluSx SINE Alu -7 305 22 496 199 122 39 chr5 42683194 42683350 -156946800 - L1ME3A LINE L1 -71 6099 5931 240 247 11 22 chr5 42683386 42683475 -156946675 - L1M4 LINE L1 -1796 4350 4263 703 206 0 30 chr5 42683481 42683612 -156946538 - FRAM SINE Alu -30 146 20 261 255 69 0 chr5 42683741 42683843 -156946307 - L1MEc LINE L1 -4576 1820 1712 861 221 77 31 chr5 42683861 42684083 -156946067 - MLT1F LTR MaLR -54 488 257 394 285 94 40 chr5 42684291 42684642 -156945508 - L1MEc LINE L1 -5245 1151 782 1777 181 0 3 chr5 42684880 42685184 -156944966 + AluJb SINE Alu 1 303 -9 21 0 0 0 chr5 42686137 42686158 -156943992 + AT_rich Low_complexity Low_complexity 1 21 0 237 304 80 0 chr5 42686547 42686659 -156943491 - L1P LINE L1 -781 5365 5245 343 192 10 10 chr5 42687078 42687177 -156942973 + (TA)n Simple_repeat Simple_repeat 2 100 0 670 236 123 14 chr5 42687285 42687497 -156942653 - L1ME2 LINE L1 0 6164 5930 302 294 126 14 chr5 42687695 42687838 -156942312 - L1M4 LINE L1 -1900 4246 4088 2280 83 3 16 chr5 42687999 42688312 -156941838 + AluSc SINE Alu 1 309 0 1859 76 50 29 chr5 42689151 42689428 -156940722 - AluSc SINE Alu -26 283 1 1212 145 30 0 chr5 42689467 42689667 -156940483 + MER2 DNA MER2_type 1 206 -139 2386 77 0 3 chr5 42690017 42690314 -156939836 - AluSx SINE Alu -16 296 1 1590 159 107 20 chr5 42690373 42690718 -156939432 + THE1C LTR MaLR 1 375 0 13408 101 18 2 chr5 42690959 42692927 -156937223 - L1PA7 LINE L1 -1913 4233 2234 8115 80 26 2 chr5 42692927 42694811 -156935339 + L1PA7 LINE L1 4232 6151 -3 484 75 0 97 chr5 42694811 42695206 -156934944 + (TA)n Simple_repeat Simple_repeat 1 356 0 477 248 64 28 chr5 42696782 42696923 -156933227 + MIR3 SINE MIR 50 195 -13 197 241 74 0 chr5 42697500 42697554 -156932596 + MIR SINE MIR 41 98 -110 28 0 0 0 chr5 42698015 42698043 -156932107 + AT_rich Low_complexity Low_complexity 1 28 0 1568 139 51 83 chr5 42698046 42698219 -156931931 + MER46B DNA MER2_type 1 32 -2699 2267 64 0 27 chr5 42698219 42698515 -156931635 + AluY SINE Alu 1 288 -23 1568 139 51 83 chr5 42698515 42698714 -156931436 + MER46B DNA MER2_type 32 236 0 297 0 0 0 chr5 42698738 42698771 -156931379 + (A)n Simple_repeat Simple_repeat 1 33 0 1535 216 106 30 chr5 42699183 42699478 -156930672 + Charlie1b DNA MER1_type 2 343 -2418 2532 90 22 20 chr5 42699478 42699901 -156930249 + L1PB2 LINE L1 5740 6163 0 1535 216 106 30 chr5 42699901 42700039 -156930111 + Charlie1b DNA MER1_type 343 469 -54 28 48 0 0 chr5 42700987 42701029 -156929121 + AT_rich Low_complexity Low_complexity 1 42 0 234 333 33 17 chr5 42702151 42702271 -156927879 + L1MEc LINE L1 505 626 -5981 1301 137 0 5 chr5 42702614 42702804 -156927346 - AluSx SINE Alu -123 189 1 236 208 19 0 chr5 42702934 42702987 -156927163 + L1MEc LINE L1 900 953 -5473 2180 104 0 13 chr5 42703050 42703366 -156926784 + AluSx SINE Alu 1 312 0 384 288 91 59 chr5 42704592 42704868 -156925282 - L1MEc LINE L1 -5082 1663 1372 2197 101 0 19 chr5 42704868 42705186 -156924964 - AluSx SINE Alu 0 312 1 384 288 91 59 chr5 42705186 42705249 -156924901 - L1MEc LINE L1 -5373 1372 1313 236 208 19 0 chr5 42705249 42705302 -156924848 - L1MEc LINE L1 -4955 1090 1037 1266 136 0 11 chr5 42705432 42705623 -156924527 + AluSx SINE Alu 1 189 -123 234 333 33 17 chr5 42705967 42706087 -156924063 - L1MEc LINE L1 -5981 764 643 28 48 0 0 chr5 42707209 42707251 -156922899 + AT_rich Low_complexity Low_complexity 1 42 0 1535 216 106 30 chr5 42708199 42708337 -156921813 - Charlie1b DNA MER1_type -2292 469 343 189 0 0 0 chr5 42708337 42708358 -156921792 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2549 87 22 20 chr5 42708358 42708760 -156921390 - L1PB2 LINE L1 -9 6142 5740 1535 216 106 30 chr5 42708760 42709055 -156921095 - Charlie1b DNA MER1_type -2417 344 2 414 0 0 0 chr5 42709474 42709520 -156920630 + (T)n Simple_repeat Simple_repeat 1 46 0 1556 139 51 83 chr5 42709544 42709743 -156920407 - MER46B DNA MER2_type -2495 236 178 2237 68 0 27 chr5 42709743 42710039 -156920111 - AluY SINE Alu -23 288 1 1556 139 51 83 chr5 42710039 42710212 -156919938 - MER46B DNA MER2_type -2553 178 1 28 0 0 0 chr5 42710215 42710243 -156919907 + AT_rich Low_complexity Low_complexity 1 28 0 197 241 74 0 chr5 42710704 42710758 -156919392 - MIR SINE MIR -110 98 41 477 248 64 28 chr5 42711335 42711476 -156918674 - MIR3 SINE MIR -13 195 50 441 59 0 103 chr5 42713048 42713392 -156916758 + (TA)n Simple_repeat Simple_repeat 1 308 0 206 147 7 84 chr5 42713403 42713546 -156916604 + (TA)n Simple_repeat Simple_repeat 1 132 0 8131 78 19 3 chr5 42713546 42715430 -156914720 - L1PA7 LINE L1 -3 6151 4232 16024 46 17 3 chr5 42715430 42717590 -156912560 + L1P LINE L1 2234 4423 -1723 435 173 0 0 chr5 42717690 42717771 -156912379 - AluS SINE Alu -232 81 1 388 309 96 45 chr5 42717848 42718018 -156912132 + L1ME3 LINE L1 846 1006 -5390 2071 105 6 19 chr5 42718018 42718333 -156911817 + AluSx SINE Alu 1 311 -1 388 309 96 45 chr5 42718333 42718608 -156911542 + L1ME3 LINE L1 1006 1314 -5082 269 237 139 35 chr5 42718790 42718963 -156911187 + L1ME3 LINE L1 2030 2220 -4176 768 255 63 12 chr5 42719069 42719402 -156910748 + L1ME3 LINE L1 2213 2562 -3653 612 289 47 30 chr5 42719371 42719776 -156910374 + L1ME3 LINE L1 3480 3891 -2324 * 1944 242 142 44 chr5 42719785 42721680 -156908470 + L1ME3 LINE L1 4066 6156 -75 180 0 0 0 chr5 42721680 42721700 -156908450 + (TA)n Simple_repeat Simple_repeat 1 20 0 1944 242 142 44 chr5 42721700 42721751 -156908399 + L1ME3 LINE L1 6156 6201 -30 317 255 153 86 chr5 42723048 42723303 -156906847 - L1MDa LINE L1 -4174 2547 2276 651 283 106 72 chr5 42723393 42723746 -156906404 - L1MDa LINE L1 -4552 1988 1649 2237 89 0 23 chr5 42723746 42724048 -156906102 - AluSx SINE Alu -17 295 1 2372 81 3 0 chr5 42724058 42724353 -156905797 - AluSp SINE Alu -17 296 1 651 283 106 72 chr5 42724353 42724769 -156905381 - L1MDa LINE L1 -4899 1641 1298 528 93 0 0 chr5 42725947 42726022 -156904128 + (GGGGA)n Simple_repeat Simple_repeat 5 79 0 1901 163 62 19 chr5 42726381 42726755 -156903395 - MLT1B LTR MaLR 0 390 1 200 240 8 47 chr5 42726980 42727109 -156903041 + (TTATA)n Simple_repeat Simple_repeat 5 128 0 22 0 0 0 chr5 42727132 42727154 -156902996 + AT_rich Low_complexity Low_complexity 1 22 0 431 250 9 35 chr5 42727609 42727725 -156902425 - MIR SINE MIR -122 140 28 23 0 0 0 chr5 42728007 42728030 -156902120 + AT_rich Low_complexity Low_complexity 1 23 0 1597 134 64 55 chr5 42729216 42729635 -156900515 + THE1C LTR MaLR 1 375 0 10673 101 14 31 chr5 42729635 42731243 -156898907 + THE1C-int LTR MaLR 1 1580 0 1798 112 18 185 chr5 42731245 42731693 -156898457 + THE1C LTR MaLR 3 375 0 270 363 78 16 chr5 42732140 42732396 -156897754 + MLT1K LTR MaLR 281 552 -36 252 250 0 0 chr5 42733034 42733090 -156897060 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 1803 157 61 0 chr5 42733131 42733425 -156896725 + MER7A DNA MER2_type 1 310 -36 1151 200 5 14 chr5 42734675 42734895 -156895255 + MER20 DNA MER1_type 2 219 0 184 273 0 23 chr5 42735043 42735087 -156895063 - L2 LINE L2 -21 3251 3209 399 304 23 18 chr5 42735528 42735699 -156894451 + GA-rich Low_complexity Low_complexity 1 172 0 1127 184 61 19 chr5 42735984 42736294 -156893856 + MER33 DNA MER1_type 1 323 -1 440 236 19 19 chr5 42737110 42737216 -156892934 - MER5A DNA MER1_type -80 109 4 13554 132 50 20 chr5 42737619 42739945 -156890205 + Tigger1 DNA MER2_type 24 2418 0 1553 160 45 120 chr5 42740614 42741040 -156889110 + MSTD LTR MaLR 1 394 -2 1939 161 31 6 chr5 42741159 42741508 -156888642 + MER47A DNA MER2_type 2 359 -7 251 276 14 2 chr5 42741511 42741611 -156888539 + L1M4c LINE L1 1242 1383 -5045 418 287 34 51 chr5 42742146 42742439 -156887711 + L1M4c LINE L1 1358 1645 -4783 247 269 62 36 chr5 42742465 42742658 -156887492 + L1MCa LINE L1 1407 1604 -4822 289 179 18 18 chr5 42742677 42742733 -156887417 - MER58 DNA MER1_type -159 56 1 2282 138 12 3 chr5 42743177 42743511 -156886639 - MER1B DNA MER1_type -2 337 1 465 238 39 61 chr5 42744104 42744285 -156885865 - L2 LINE L2 -4 3309 3133 280 230 27 14 chr5 42744630 42744704 -156885446 - MER58B DNA MER1_type -37 304 230 1542 202 22 28 chr5 42744735 42745096 -156885054 - MLT1A1 LTR MaLR -6 359 1 924 168 0 46 chr5 42745413 42745609 -156884541 + AluJb SINE Alu 129 312 0 2277 91 3 3 chr5 42745950 42746247 -156883903 + AluSp SINE Alu 1 297 -16 21 0 0 0 chr5 42746705 42746726 -156883424 + AT_rich Low_complexity Low_complexity 1 21 0 1795 221 101 21 chr5 42747051 42747397 -156882753 + L1ME2 LINE L1 5163 5480 -684 2837 10 0 0 chr5 42747397 42747706 -156882444 - AluYa5 SINE Alu -2 309 1 1795 221 101 21 chr5 42747706 42747972 -156882178 + L1ME2 LINE L1 5480 5821 -343 897 163 0 0 chr5 42747975 42748122 -156882028 + FRAM SINE Alu 1 146 -30 821 221 88 32 chr5 42748141 42748461 -156881689 + L1ME2 LINE L1 5811 6165 -9 359 335 95 20 chr5 42748878 42749078 -156881072 + MIR SINE MIR 48 262 0 322 272 98 11 chr5 42749864 42749956 -156880194 + L2 LINE L2 3199 3298 -15 464 318 150 13 chr5 42751290 42751523 -156878627 - L3 LINE CR1 -83 1494 1230 1236 218 23 0 chr5 42751697 42751963 -156878187 + L1MCa LINE L1 20 291 -6135 288 314 48 0 chr5 42752238 42752343 -156877807 - MER94 DNA DNA -9 125 16 2111 113 0 30 chr5 42752484 42752785 -156877365 - AluSg SINE Alu -18 292 1 943 175 35 5 chr5 42752871 42753071 -156877079 + L1PA16 LINE L1 5958 6163 -3 34353 46 2 2 chr5 42753553 42757814 -156872336 + L1P LINE L1 1 4264 -1882 20945 33 7 78 chr5 42757914 42761309 -156868841 + L1PA4 LINE L1 2815 6152 -3 34 96 0 0 chr5 42761321 42761425 -156868725 + AT_rich Low_complexity Low_complexity 1 104 0 29 28 0 0 chr5 42761511 42761547 -156868603 + AT_rich Low_complexity Low_complexity 1 36 0 377 281 33 25 chr5 42761831 42761952 -156868198 + L2 LINE L2 3187 3308 -5 218 360 68 14 chr5 42762393 42762540 -156867610 - L2 LINE L2 -792 2522 2368 861 145 0 7 chr5 42762658 42762796 -156867354 + FRAM SINE Alu 33 169 -7 192 277 0 31 chr5 42762909 42762974 -156867176 - MER5A DNA MER1_type -92 97 35 * 247 237 17 17 chr5 42762931 42762990 -156867160 + MER5A DNA MER1_type 124 182 -7 546 233 83 47 chr5 42763183 42763376 -156866774 - MIR SINE MIR -44 218 19 305 240 0 83 chr5 42763514 42763610 -156866540 + L2 LINE L2 3225 3312 -1 247 111 89 0 chr5 42763679 42763724 -156866426 + L1MA6 LINE L1 5441 5489 -808 429 152 0 0 chr5 42763725 42763791 -156866359 + AluJ/FRAM SINE Alu 221 286 -26 4006 130 61 38 chr5 42763792 42764483 -156865667 + L1MA6 LINE L1 5476 6189 -111 1914 137 158 21 chr5 42764483 42764856 -156865294 + MSTC LTR MaLR 1 424 -4 4006 130 61 38 chr5 42764856 42764971 -156865179 + L1MA6 LINE L1 6189 6300 0 366 200 154 9 chr5 42764998 42765108 -156865042 + L1ME3A LINE L1 6045 6170 0 324 0 0 0 chr5 42766857 42766893 -156863257 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1502 178 6 55 chr5 42766896 42767222 -156862928 + AluJo SINE Alu 1 310 -2 2240 109 15 18 chr5 42768007 42768345 -156861805 - MER1B DNA MER1_type 0 337 1 331 225 95 122 chr5 42768420 42768642 -156861508 - MER46C DNA MER2_type -122 216 1 373 272 48 0 chr5 42768933 42769036 -156861114 + MER5A DNA MER1_type 4 111 -78 2353 190 55 11 chr5 42769075 42769578 -156860572 + MER68 LTR ERV1 1 603 -2 322 290 141 75 chr5 42769647 42769981 -156860169 + L1MEd LINE L1 260 615 -5504 769 271 41 23 chr5 42770199 42770417 -156859733 - MER58A DNA MER1_type -2 222 1 553 246 71 54 chr5 42770535 42770885 -156859265 + L1MEd LINE L1 902 1257 -4862 215 106 43 0 chr5 42770998 42771045 -156859105 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 730 205 36 98 chr5 42771094 42771155 -156858995 + L1MC5 LINE L1 7603 7666 -295 2055 133 7 3 chr5 42771155 42771464 -156858686 - AluSx SINE Alu -2 310 1 730 205 36 98 chr5 42771464 42771738 -156858412 + L1MC5 LINE L1 7666 7917 -44 225 154 0 0 chr5 42771858 42771897 -156858253 + (CA)n Simple_repeat Simple_repeat 1 39 0 360 283 17 23 chr5 42771901 42772074 -156858076 + L1ME3A LINE L1 5603 5774 -396 250 360 24 0 chr5 42772120 42772245 -156857905 - MIR SINE MIR -31 231 104 2101 97 7 20 chr5 42772295 42772594 -156857556 + AluSx SINE Alu 1 295 -17 1405 230 42 3 chr5 42772716 42772920 -156857230 + Tigger5 DNA MER2_type 7 227 -2096 1598 161 18 26 chr5 42772920 42773193 -156856957 + AluJo SINE Alu 1 271 -41 1405 230 42 3 chr5 42773193 42773275 -156856875 + Tigger5 DNA MER2_type 227 304 -2019 249 248 144 32 chr5 42774138 42774263 -156855887 + MER117 DNA MER1_type 6 144 -53 221 180 200 0 chr5 42774353 42774403 -156855747 + L2 LINE L2 3251 3310 -3 2539 30 7 3 chr5 42774439 42774735 -156855415 + AluY SINE Alu 1 297 -14 1433 88 0 5 chr5 42774735 42774927 -156855223 + AluSg/x SINE Alu 109 299 -13 24 0 0 0 chr5 42775240 42775264 -156854886 + AT_rich Low_complexity Low_complexity 1 24 0 335 288 208 15 chr5 42775919 42776183 -156853967 + L2 LINE L2 2661 2975 -339 434 280 93 33 chr5 42776246 42776460 -156853690 + L2 LINE L2 3080 3306 -7 469 355 150 15 chr5 42776593 42776999 -156853151 - L2 LINE L2 -626 2688 2228 942 274 133 39 chr5 42777000 42777182 -156852968 - L2 LINE L2 -2 3311 3147 1782 160 3 28 chr5 42777182 42777501 -156852649 + AluJb SINE Alu 2 312 0 942 274 133 39 chr5 42777501 42777778 -156852372 - L2 LINE L2 -166 3147 2809 185 369 0 0 chr5 42777845 42777910 -156852240 + L2 LINE L2 3208 3272 0 278 152 0 0 chr5 42780048 42780094 -156850056 - L1ME3 LINE L1 -197 5965 5920 * 991 194 37 40 chr5 42780090 42780363 -156849787 + L1ME3A LINE L1 5894 6165 -5 315 299 184 25 chr5 42780658 42780859 -156849291 - MIR SINE MIR -29 233 1 322 303 78 37 chr5 42781660 42781878 -156848272 + MIR SINE MIR 9 235 -27 235 280 0 0 chr5 42781941 42781991 -156848159 + L2 LINE L2 3257 3306 -7 372 312 107 51 chr5 42782087 42782321 -156847829 + L3 LINE CR1 1308 1554 -23 21 0 0 0 chr5 42783341 42783362 -156846788 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 42784574 42784595 -156845555 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 42784797 42784818 -156845332 + AT_rich Low_complexity Low_complexity 1 21 0 270 146 21 0 chr5 42785733 42785781 -156844369 - MIR SINE MIR -120 142 94 2094 168 75 0 chr5 42785880 42786278 -156843872 - MSTA LTR MaLR 0 428 1 9739 157 12 5 chr5 42786278 42787917 -156842233 - MSTA-int LTR MaLR 0 1651 1 2091 169 96 0 chr5 42787917 42788301 -156841849 - MSTA LTR MaLR 0 428 8 203 277 239 23 chr5 42788543 42788673 -156841477 + L2 LINE L2 2323 2480 -834 209 351 59 86 chr5 42788760 42789099 -156841051 - L2 LINE L2 -52 3220 2891 189 248 147 115 chr5 42789746 42789903 -156840247 + MIR SINE MIR 69 230 -32 202 323 31 55 chr5 42790522 42790649 -156839501 + L2 LINE L2 2561 2684 -630 2756 10 0 13 chr5 42791014 42791323 -156838827 + AluYb8 SINE Alu 1 305 -13 29 70 0 0 chr5 42791434 42791491 -156838659 + AT_rich Low_complexity Low_complexity 1 57 0 523 322 58 33 chr5 42792298 42792540 -156837610 - MIR SINE MIR -6 256 9 357 208 76 145 chr5 42794795 42795098 -156835052 + L1M2 LINE L1 674 955 -5894 36 62 0 0 chr5 42795270 42795334 -156834816 + GC_rich Low_complexity Low_complexity 1 64 0 612 0 0 0 chr5 42796115 42796183 -156833967 + (CA)n Simple_repeat Simple_repeat 2 69 0 335 336 38 30 chr5 42796271 42796402 -156833748 + L2 LINE L2 3182 3313 0 229 268 148 55 chr5 42796469 42796853 -156833297 + L1ME4a LINE L1 5694 6113 -8 189 347 40 32 chr5 42797284 42797408 -156832742 - L3b LINE CR1 -172 1411 1287 283 287 0 21 chr5 42798651 42798745 -156831405 + L1ME4a LINE L1 5963 6054 -67 2144 238 135 51 chr5 42799050 42800362 -156829788 - Charlie7 DNA MER1_type -271 2341 701 1341 225 39 3 chr5 42800362 42800479 -156829671 + AluJo SINE Alu 5 116 -196 213 39 0 0 chr5 42800479 42800505 -156829645 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1341 225 39 3 chr5 42800505 42800672 -156829478 + AluJo SINE Alu 116 299 -13 2144 238 135 51 chr5 42800672 42801320 -156828830 - Charlie7 DNA MER1_type -1911 701 109 228 200 0 0 chr5 42801322 42801372 -156828778 + T-rich Low_complexity Low_complexity 1 50 0 586 274 79 27 chr5 42801567 42801859 -156828291 + L1MEd LINE L1 522 828 -5291 265 302 79 101 chr5 42801895 42802733 -156827417 + L1ME1 LINE L1 45 845 -5551 2307 107 0 0 chr5 42802733 42803032 -156827118 + AluSg SINE Alu 1 299 -11 265 302 79 101 chr5 42803032 42803485 -156826665 + L1ME1 LINE L1 845 1307 -5089 * 608 265 17 9 chr5 42803464 42803694 -156826456 + L1ME1 LINE L1 3280 3511 -2704 2258 244 45 13 chr5 42803697 42803867 -156826283 + L1ME1 LINE L1 4686 4849 -1386 2108 136 33 14 chr5 42803867 42804235 -156825915 - THE1C LTR MaLR 0 375 1 2258 244 45 13 chr5 42804235 42805267 -156824883 + L1ME1 LINE L1 4849 5921 -314 1341 97 0 0 chr5 42805267 42805442 -156824708 - AluSp SINE Alu -5 308 134 2291 94 0 19 chr5 42805442 42805749 -156824401 - AluSg SINE Alu -9 301 1 1188 233 28 6 chr5 42805750 42806068 -156824082 + L1ME1 LINE L1 5908 6232 -3 583 323 84 37 chr5 42806134 42806537 -156823613 + L1MEd LINE L1 1009 1430 -4701 7523 207 122 5 chr5 42806544 42808129 -156822021 + L1MA4A LINE L1 2 1771 -5078 * 13985 170 26 22 chr5 42808125 42808395 -156821755 + L1MA4A LINE L1 2887 3154 -3851 680 207 0 8 chr5 42808395 42808516 -156821634 + FLAM_C SINE Alu 1 120 -13 13985 170 26 22 chr5 42808516 42812341 -156817809 + L1MA4A LINE L1 3154 6999 -6 1986 142 67 20 chr5 42812840 42813186 -156816964 + THE1C LTR MaLR 14 375 0 628 302 90 14 chr5 42813195 42813407 -156816743 - MLT2E LTR ERVL -365 263 36 3206 179 13 4 chr5 42813410 42813967 -156816183 - MER68 LTR ERV1 0 562 1 2445 70 3 0 chr5 42814976 42815277 -156814873 + AluY SINE Alu 1 302 -9 1211 273 64 67 chr5 42815380 42816259 -156813891 + L1MEd LINE L1 40 965 -5154 275 134 16 45 chr5 42816316 42816382 -156813768 - Alu SINE Alu -13 289 246 937 212 47 0 chr5 42816414 42816607 -156813543 + AluJo SINE Alu 1 202 -110 333 237 26 9 chr5 42816708 42816822 -156813328 + L1M4 LINE L1 4996 5111 -1035 331 276 14 28 chr5 42816878 42817023 -156813127 + L1M4 LINE L1 5625 5767 -417 2274 112 0 3 chr5 42817114 42817426 -156812724 + AluSx SINE Alu 1 311 -1 24 0 0 0 chr5 42817716 42817740 -156812410 + AT_rich Low_complexity Low_complexity 1 24 0 588 266 47 34 chr5 42817776 42818009 -156812141 + MARNA DNA Mariner 183 418 -168 3839 130 12 20 chr5 42818058 42818673 -156811477 - L1MA4A LINE L1 -6 6297 5686 1581 152 56 26 chr5 42818673 42818976 -156811174 - AluJo SINE Alu 0 312 1 3839 130 12 20 chr5 42818976 42818999 -156811151 - L1MA4A LINE L1 -617 5686 5664 206 230 0 61 chr5 42819175 42819323 -156810827 + (TTAAA)n Simple_repeat Simple_repeat 3 141 0 2313 88 0 16 chr5 42819625 42819931 -156810219 - AluSg SINE Alu -9 301 1 1135 178 85 27 chr5 42819942 42820186 -156809964 + LTR16A1 LTR ERVL 185 446 -11 1213 181 30 124 chr5 42820186 42820589 -156809561 + MLT1A1 LTR MaLR 1 365 0 1135 178 85 27 chr5 42820589 42820602 -156809548 + LTR16A1 LTR ERVL 446 457 0 599 276 149 69 chr5 42821558 42821755 -156808395 + Charlie8 DNA MER1_type 1 181 -2236 1027 272 78 36 chr5 42821755 42822252 -156807898 - LTR33 LTR ERVL -3 518 1 599 276 149 69 chr5 42822252 42822518 -156807632 + Charlie8 DNA MER1_type 181 501 -1916 1792 141 11 4 chr5 42822551 42822828 -156807322 + AluJb SINE Alu 11 289 -23 2324 86 0 0 chr5 42822880 42823172 -156806978 - AluY SINE Alu -19 292 1 383 322 112 19 chr5 42823730 42823988 -156806162 + LTR16A LTR ERVL 148 429 -21 377 298 61 0 chr5 42824009 42824140 -156806010 + L2 LINE L2 1840 1978 -1336 21 0 0 0 chr5 42824211 42824232 -156805918 + AT_rich Low_complexity Low_complexity 1 21 0 225 294 73 51 chr5 42824331 42824508 -156805642 - L2 LINE L2 -831 2483 2303 277 370 29 7 chr5 42824599 42824737 -156805413 - MER5B DNA MER1_type -4 174 34 1061 285 79 36 chr5 42824740 42825185 -156804965 - LTR16B LTR ERVL 0 464 1 242 293 84 37 chr5 42825215 42825406 -156804744 - L2 LINE L2 -1550 1764 1565 1486 192 42 3 chr5 42825764 42826051 -156804099 - AluJb SINE Alu -14 298 1 244 271 0 0 chr5 42826052 42826100 -156804050 - L2 LINE L2 -1897 1417 1370 24 0 0 0 chr5 42826162 42826186 -156803964 + AT_rich Low_complexity Low_complexity 1 24 0 250 264 120 35 chr5 42827001 42827115 -156803035 - MIR SINE MIR -23 185 57 23 0 0 0 chr5 42829103 42829126 -156801024 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 42829559 42829583 -156800567 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr5 42831101 42831134 -156799016 + AT_rich Low_complexity Low_complexity 1 33 0 2084 135 3 0 chr5 42835926 42836223 -156793927 - AluSx SINE Alu -14 298 1 190 378 18 18 chr5 42836354 42836465 -156793685 - L2 LINE L2 -605 2709 2599 652 282 125 35 chr5 42836721 42837040 -156793110 + LTR16C LTR ERVL 75 422 -69 256 213 49 0 chr5 42837578 42837639 -156792511 + MER5A DNA MER1_type 18 81 -108 1819 164 0 19 chr5 42838720 42839031 -156791119 - AluJo SINE Alu -7 305 1 348 348 33 17 chr5 42839273 42839454 -156790696 - MER5A DNA MER1_type 0 189 6 29 28 0 0 chr5 42840148 42840184 -156789966 + AT_rich Low_complexity Low_complexity 1 36 0 249 33 0 0 chr5 42841049 42841079 -156789071 + (TG)n Simple_repeat Simple_repeat 1 30 0 230 234 0 0 chr5 42841079 42841126 -156789024 + GA-rich Low_complexity Low_complexity 2 48 0 480 244 15 134 chr5 42841254 42841455 -156788695 - MER5B DNA MER1_type 0 178 2 27 29 0 0 chr5 42841509 42841543 -156788607 + AT_rich Low_complexity Low_complexity 1 34 0 27 29 0 0 chr5 42841788 42841822 -156788328 + AT_rich Low_complexity Low_complexity 1 34 0 198 0 0 0 chr5 42842008 42842030 -156788120 + (A)n Simple_repeat Simple_repeat 1 22 0 246 333 26 0 chr5 42844934 42845012 -156785138 - MIR SINE MIR -152 110 31 438 53 0 0 chr5 42845740 42845797 -156784353 + (CA)n Simple_repeat Simple_repeat 1 57 0 245 309 0 0 chr5 42846496 42846590 -156783560 + (TG)n Simple_repeat Simple_repeat 1 94 0 1994 151 3 7 chr5 42847246 42847551 -156782599 + AluJo SINE Alu 3 306 -6 2265 109 3 3 chr5 42847608 42847919 -156782231 + AluSp SINE Alu 1 311 -2 29 47 0 0 chr5 42847979 42848022 -156782128 + AT_rich Low_complexity Low_complexity 1 43 0 512 59 0 0 chr5 42848237 42848305 -156781845 + Alu SINE Alu 236 303 -7 329 322 0 26 chr5 42850417 42850569 -156779581 + GA-rich Low_complexity Low_complexity 1 148 0 319 222 20 30 chr5 42852699 42852798 -156777352 - HsTC2 DNA Tc2 -6 1892 1795 21 0 0 0 chr5 42852821 42852842 -156777308 + AT_rich Low_complexity Low_complexity 1 21 0 2257 100 0 0 chr5 42853074 42853373 -156776777 - AluY SINE Alu -12 299 1 451 276 55 7 chr5 42853562 42853707 -156776443 - MIR SINE MIR -74 188 37 29 0 0 0 chr5 42854399 42854428 -156775722 + AT_rich Low_complexity Low_complexity 1 29 0 201 238 0 29 chr5 42854610 42854715 -156775435 + T-rich Low_complexity Low_complexity 3 104 0 22 0 0 0 chr5 42855721 42855743 -156774407 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 42856265 42856287 -156773863 + AT_rich Low_complexity Low_complexity 1 22 0 340 274 85 38 chr5 42856759 42857490 -156772660 + L1ME LINE L1 4754 5514 -656 402 149 0 0 chr5 42858160 42858227 -156771923 + AluSx SINE Alu 61 127 -175 478 143 13 0 chr5 42858227 42858304 -156771846 - MADE1 DNA Mariner 0 80 3 1215 146 0 6 chr5 42858304 42858482 -156771668 + AluSx SINE Alu 124 300 -12 539 371 91 48 chr5 42858525 42860191 -156769959 + L2 LINE L2 990 2727 -587 24 53 0 0 chr5 42860443 42860481 -156769669 + AT_rich Low_complexity Low_complexity 1 38 0 1441 208 144 49 chr5 42860803 42861124 -156769026 + L1MC5 LINE L1 7191 7480 -481 2309 103 3 0 chr5 42861124 42861434 -156768716 + AluSq SINE Alu 1 311 -2 1441 208 144 49 chr5 42861434 42861771 -156768379 + L1MC5 LINE L1 7480 7912 -49 213 245 20 0 chr5 42862269 42862318 -156767832 + L2 LINE L2 2765 2814 -500 2259 115 3 6 chr5 42862501 42862814 -156767336 - AluSx SINE Alu 0 312 1 24 53 0 0 chr5 42863416 42863454 -156766696 + AT_rich Low_complexity Low_complexity 1 38 0 1062 163 6 6 chr5 42863990 42864168 -156765982 - AluJb SINE Alu -9 303 126 390 21 0 0 chr5 42864176 42864223 -156765927 + (TG)n Simple_repeat Simple_repeat 2 48 0 2287 39 89 0 chr5 42864422 42864703 -156765447 - AluY SINE Alu -4 307 2 505 52 26 0 chr5 42864856 42864933 -156765217 + (TA)n Simple_repeat Simple_repeat 1 79 0 592 192 0 25 chr5 42864933 42865053 -156765097 - AluJb SINE Alu -191 121 5 333 0 0 0 chr5 42865112 42865149 -156765001 + (T)n Simple_repeat Simple_repeat 1 37 0 1597 229 234 3 chr5 42866111 42866766 -156763384 + L2 LINE L2 1567 2372 -942 2113 173 60 58 chr5 42866795 42867293 -156762857 + LTR54 LTR ERV1 1 499 -11 1331 288 75 57 chr5 42867341 42868022 -156762128 + L2 LINE L2 2409 3181 -132 2019 149 0 0 chr5 42868022 42868317 -156761833 - AluJo SINE Alu -17 295 1 1331 288 75 57 chr5 42868317 42868450 -156761700 + L2 LINE L2 3181 3310 -3 537 253 148 48 chr5 42869587 42869816 -156760334 + MIR SINE MIR 7 258 -4 222 254 0 0 chr5 42869819 42869878 -156760272 + (TGG)n Simple_repeat Simple_repeat 3 61 0 748 167 126 75 chr5 42870386 42870513 -156759637 - MER63 DNA MER1_type -810 251 132 1633 177 0 40 chr5 42870513 42870813 -156759337 - AluJo SINE Alu -24 288 1 748 167 126 75 chr5 42870813 42870924 -156759226 - MER63 DNA MER1_type -929 132 1 1498 107 0 0 chr5 42871226 42871431 -156758719 - AluSg/x SINE Alu -4 308 104 1106 147 0 6 chr5 42871449 42871619 -156758531 - AluSg SINE Alu -141 169 1 21 71 0 0 chr5 42872426 42872468 -156757682 + AT_rich Low_complexity Low_complexity 1 42 0 378 304 29 0 chr5 42873062 42873200 -156756950 + MLT1K LTR MaLR 291 432 -156 231 304 0 38 chr5 42873786 42873865 -156756285 - MIR SINE MIR -154 108 33 601 245 60 27 chr5 42875586 42875807 -156754343 + MIR SINE MIR 31 257 -5 190 284 86 0 chr5 42876223 42876304 -156753846 + L2 LINE L2 1327 1414 -1900 215 207 0 69 chr5 42876498 42876556 -156753594 - L2 LINE L2 -1 3271 3218 263 333 14 42 chr5 42876586 42876730 -156753420 + L2 LINE L2 1671 1810 -1504 247 333 5 0 chr5 42876819 42876901 -156753249 + MIR SINE MIR 60 143 -65 317 366 24 30 chr5 42877237 42877441 -156752709 + MIR SINE MIR 7 210 -52 22 0 0 0 chr5 42877792 42877814 -156752336 + AT_rich Low_complexity Low_complexity 1 22 0 358 278 30 35 chr5 42878174 42878372 -156751778 - L1MC4a LINE L1 -1878 5930 5734 2183 194 68 20 chr5 42878384 42878945 -156751205 - L1MB8 LINE L1 -17 6161 5574 369 281 107 48 chr5 42878914 42879094 -156751056 - L1MC4a LINE L1 -2037 5771 5603 * 2311 63 14 3 chr5 42879094 42879381 -156750769 + AluSc SINE Alu 1 290 -19 369 281 107 48 chr5 42879381 42879592 -156750558 - L1MC4a LINE L1 -2205 5603 5357 289 273 189 54 chr5 42880846 42881106 -156749044 - MER102b DNA MER1_type -9 332 38 1912 146 37 0 chr5 42881110 42881404 -156748746 - AluSq SINE Alu -8 305 1 4587 162 27 25 chr5 42881816 42882843 -156747307 + L1PB4 LINE L1 4628 5652 -504 2201 118 7 0 chr5 42882843 42883149 -156747001 + AluSq SINE Alu 1 308 -5 4587 162 27 25 chr5 42883149 42883656 -156746494 + L1PB4 LINE L1 5652 6156 0 521 93 40 0 chr5 42883736 42883811 -156746339 + MADE1 DNA Mariner 3 80 0 261 57 0 0 chr5 42883944 42883979 -156746171 + (TC)n Simple_repeat Simple_repeat 2 36 0 1187 84 0 0 chr5 42886250 42886393 -156743757 + AluSq/x SINE Alu 1 143 -170 720 342 78 33 chr5 42887149 42887635 -156742515 + L2 LINE L2 2470 2977 -337 2047 123 14 7 chr5 42887693 42887986 -156742164 + AluSx SINE Alu 1 295 -17 1199 169 0 0 chr5 42888036 42888225 -156741925 + MER5A DNA MER1_type 1 189 0 2238 116 0 0 chr5 42888851 42889145 -156741005 + AluSx SINE Alu 1 294 -18 5230 167 25 9 chr5 42889151 42890976 -156739174 - L1PA16 LINE L1 -9 6157 4313 320 270 34 81 chr5 42891245 42891393 -156738757 - MIR3 SINE MIR -58 150 10 2415 100 3 0 chr5 42892826 42893137 -156737013 - AluSx SINE Alu 0 312 1 403 307 100 7 chr5 42894043 42894193 -156735957 - MIR3 SINE MIR -6 202 39 345 299 83 7 chr5 42894820 42894964 -156735186 - MER103 DNA DNA -1 165 11 190 300 0 0 chr5 42895041 42895091 -156735059 - MIR SINE MIR -10 252 203 308 296 40 32 chr5 42895135 42895260 -156734890 + MIR SINE MIR 27 152 -110 826 243 53 28 chr5 42895744 42895991 -156734159 - MIR SINE MIR -1 261 9 1063 106 0 0 chr5 42896221 42896363 -156733787 - AluSx SINE Alu 0 310 169 681 140 0 0 chr5 42896366 42896466 -156733684 - AluSx SINE Alu -213 100 1 467 332 24 100 chr5 42896469 42896849 -156733301 + L2 LINE L2 2906 3256 -16 246 346 44 44 chr5 42897674 42897810 -156732340 - L2 LINE L2 0 3272 3137 737 174 55 101 chr5 42897910 42898129 -156732021 + MER3 DNA MER1_type 1 209 0 532 330 215 20 chr5 42898236 42898562 -156731588 + L2 LINE L2 2261 2522 -792 726 168 0 0 chr5 42898562 42898699 -156731451 - L1MB1 LINE L1 0 6168 6032 532 330 215 20 chr5 42898699 42898920 -156731230 + L2 LINE L2 2522 2915 -399 633 61 0 0 chr5 42898957 42899039 -156731111 + (TG)n Simple_repeat Simple_repeat 1 82 0 349 22 0 0 chr5 42899487 42899532 -156730618 + L1ME LINE L1 5134 5178 -968 584 199 23 0 chr5 42899547 42899678 -156730472 + L1MA10 LINE L1 6191 6324 -10 1033 150 12 0 chr5 42899717 42899884 -156730266 - AluJ SINE Alu -16 296 128 550 190 41 34 chr5 42899920 42900221 -156729929 + L1ME LINE L1 5189 5492 -678 * 1275 164 29 36 chr5 42900194 42900362 -156729788 + L1MA9 LINE L1 5884 6051 -261 1890 116 60 28 chr5 42900362 42900646 -156729504 + AluSx SINE Alu 1 293 -19 1275 164 29 36 chr5 42900646 42900752 -156729398 + L1MA9 LINE L1 6051 6156 -156 835 128 0 8 chr5 42900916 42901041 -156729109 - AluJ SINE Alu -188 124 1 251 331 105 0 chr5 42901204 42901328 -156728822 - L2 LINE L2 -2823 491 355 1693 164 35 3 chr5 42901669 42901955 -156728195 - AluJo SINE Alu -17 295 1 27 0 0 0 chr5 42902252 42902279 -156727871 + AT_rich Low_complexity Low_complexity 1 27 0 579 311 164 39 chr5 42902441 42903311 -156726839 + L2 LINE L2 515 1493 -1821 641 188 43 0 chr5 42903359 42903497 -156726653 + MLT1D LTR MaLR 10 153 -352 16378 185 65 28 chr5 42903604 42907493 -156722657 + L1P LINE L1 826 4859 -1287 14052 66 3 6 chr5 42912810 42914819 -156715331 + L1P LINE L1 819 2822 -3324 21 36 0 0 chr5 42917168 42917196 -156712954 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 42917566 42917588 -156712562 + AT_rich Low_complexity Low_complexity 1 22 0 249 284 0 0 chr5 42923444 42923518 -156706632 + T-rich Low_complexity Low_complexity 2 75 0 32 67 0 0 chr5 42926611 42926671 -156703479 + AT_rich Low_complexity Low_complexity 1 60 0 23 33 0 0 chr5 42926795 42926825 -156703325 + AT_rich Low_complexity Low_complexity 1 30 0 221 231 0 31 chr5 42929729 42929794 -156700356 + (TA)n Simple_repeat Simple_repeat 2 64 0 31 76 0 0 chr5 42929860 42929926 -156700224 + AT_rich Low_complexity Low_complexity 1 66 0 281 278 89 58 chr5 42930431 42930622 -156699528 - L2 LINE L2 0 3313 3117 441 210 10 0 chr5 42931536 42931636 -156698514 + L1MA8 LINE L1 5990 6090 -201 238 0 81 0 chr5 42931848 42931885 -156698265 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 280 285 70 50 chr5 42932640 42932942 -156697208 + L1MEd LINE L1 904 1211 -4908 334 295 0 18 chr5 42933134 42933300 -156696850 + L1MCa LINE L1 1025 1187 -5239 3064 148 16 63 chr5 42933647 42934264 -156695886 - L1PB4 LINE L1 -2 6154 5567 697 232 0 0 chr5 42934264 42934445 -156695705 + L1P LINE L1 4977 5157 -989 26 30 0 0 chr5 42934717 42934750 -156695400 + AT_rich Low_complexity Low_complexity 1 33 0 581 315 73 76 chr5 42934953 42935490 -156694660 - L1MEd LINE L1 -5050 1069 535 244 250 0 0 chr5 42936018 42936074 -156694076 - MER5B DNA MER1_type -121 57 2 22 0 0 0 chr5 42936578 42936600 -156693550 + AT_rich Low_complexity Low_complexity 1 22 0 381 207 9 20 chr5 42937014 42937125 -156693025 + L1MA4A LINE L1 5976 6102 -201 216 255 0 0 chr5 42937344 42937395 -156692755 + GA-rich Low_complexity Low_complexity 2 52 0 25 51 0 0 chr5 42937591 42937630 -156692520 + AT_rich Low_complexity Low_complexity 1 39 0 807 154 58 19 chr5 42938768 42938924 -156691226 + THE1C LTR MaLR 1 162 -213 695 183 9 18 chr5 42939391 42939619 -156690531 + GA-rich Low_complexity Low_complexity 1 225 0 854 88 0 0 chr5 42940049 42940163 -156689987 - AluSp SINE Alu -30 283 170 1104 83 0 0 chr5 42940163 42940295 -156689855 - AluSp SINE Alu -181 132 1 372 303 0 80 chr5 42940773 42940961 -156689189 - MER5A DNA MER1_type -16 173 1 22 0 0 0 chr5 42941118 42941140 -156689010 + AT_rich Low_complexity Low_complexity 1 22 0 31 44 0 0 chr5 42941895 42941940 -156688210 + AT_rich Low_complexity Low_complexity 1 45 0 595 137 0 17 chr5 42942534 42942651 -156687499 + (TA)n Simple_repeat Simple_repeat 2 116 0 2075 94 0 0 chr5 42943185 42943452 -156686698 + AluSc SINE Alu 35 301 -8 234 0 0 0 chr5 42943646 42943672 -156686478 + (T)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr5 42943767 42943788 -156686362 + AT_rich Low_complexity Low_complexity 1 21 0 629 286 42 9 chr5 42943809 42944022 -156686128 - MIR SINE MIR -26 236 17 21 57 0 0 chr5 42944846 42944881 -156685269 + AT_rich Low_complexity Low_complexity 1 35 0 203 269 0 0 chr5 42944942 42944994 -156685156 + A-rich Low_complexity Low_complexity 3 54 0 2188 83 45 3 chr5 42945548 42945837 -156684313 - AluSq SINE Alu -9 304 4 399 270 26 26 chr5 42945845 42945960 -156684190 + MER5A DNA MER1_type 1 115 -74 216 0 0 0 chr5 42947776 42947800 -156682350 + (TG)n Simple_repeat Simple_repeat 1 24 0 529 209 70 6 chr5 42951041 42951199 -156678951 + HAL1b LINE L1 281 448 -900 1877 171 10 16 chr5 42951244 42951553 -156678597 + AluJo SINE Alu 1 307 -5 327 49 0 0 chr5 42951553 42951594 -156678556 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 2135 96 51 0 chr5 42953206 42953499 -156676651 - AluSx SINE Alu -4 308 1 182 234 141 0 chr5 42953584 42953648 -156676502 - L2 LINE L2 -82 3231 3159 375 281 231 5 chr5 42953778 42953981 -156676169 + MIR SINE MIR 14 262 0 351 328 94 16 chr5 42955106 42955298 -156674852 - MIR SINE MIR -27 235 29 201 245 29 29 chr5 42955485 42955519 -156674631 + (CATATA)n Simple_repeat Simple_repeat 1 34 -68 1716 156 126 3 chr5 42955519 42955845 -156674305 + MER47A DNA MER2_type 1 366 0 201 245 29 29 chr5 42955845 42955912 -156674238 + (CATATA)n Simple_repeat Simple_repeat 33 102 0 180 77 0 0 chr5 42956086 42956112 -156674038 + (TATATG)n Simple_repeat Simple_repeat 2 27 0 32 0 0 0 chr5 42956112 42956144 -156674006 + AT_rich Low_complexity Low_complexity 1 32 0 246 227 174 45 chr5 42956416 42956548 -156673602 + L1MC/D LINE L1 5676 5824 -1984 1197 154 48 0 chr5 42958232 42958440 -156671710 - MER20 DNA MER1_type -1 218 1 248 339 142 0 chr5 42961233 42961360 -156668790 - MIR SINE MIR -1 261 117 681 274 101 14 chr5 42962239 42962447 -156667703 + MIR SINE MIR 6 231 -31 812 245 30 55 chr5 42962733 42962970 -156667180 + MIR SINE MIR 17 247 -15 634 192 148 16 chr5 42964789 42964971 -156665179 + MER20 DNA MER1_type 14 219 0 235 71 48 0 chr5 42966028 42966070 -156664080 + (CA)n Simple_repeat Simple_repeat 1 44 0 2289 87 3 10 chr5 42966334 42966633 -156663517 - AluSx SINE Alu -15 297 1 624 239 0 0 chr5 42967734 42967851 -156662299 + FLAM_A SINE Alu 1 117 -16 2364 57 40 3 chr5 42968313 42968613 -156661537 - AluY SINE Alu 0 311 1 1819 167 0 19 chr5 42969024 42969341 -156660809 + AluJo SINE Alu 1 311 -1 261 261 267 12 chr5 42970144 42970309 -156659841 - MIR SINE MIR -51 211 5 4226 139 20 11 chr5 42971179 42971650 -156658500 + L1MB3 LINE L1 5429 5911 -272 2221 113 0 3 chr5 42971650 42971943 -156658207 + AluSx SINE Alu 1 292 -20 4226 139 20 11 chr5 42971943 42972217 -156657933 + L1MB3 LINE L1 5911 6181 -2 21 0 0 0 chr5 42972249 42972270 -156657880 + AT_rich Low_complexity Low_complexity 1 21 0 1248 233 58 25 chr5 42972828 42973228 -156656922 + MLT1C LTR MaLR 55 467 0 1308 120 29 19 chr5 42973404 42973613 -156656537 - L1PA10 LINE L1 -3 6165 5955 233 302 221 34 chr5 42974286 42974435 -156655715 - MIR3 SINE MIR -29 179 3 582 300 85 0 chr5 42974519 42974719 -156655431 - MIR SINE MIR -32 230 14 22 88 0 0 chr5 42975510 42975567 -156654583 + AT_rich Low_complexity Low_complexity 1 57 0 731 189 8 0 chr5 42975593 42975720 -156654430 - MIR SINE MIR -74 188 61 1900 177 0 16 chr5 42977131 42977534 -156652616 + AluJo SINE Alu 1 398 0 184 263 171 26 chr5 42977619 42977695 -156652455 - L2 LINE L2 0 3272 3186 597 178 27 111 chr5 42977790 42978015 -156652135 + MER58C DNA MER1_type 4 209 -6 596 273 112 8 chr5 42978054 42978321 -156651829 + MLT1J LTR MaLR 70 364 -147 1967 115 0 17 chr5 42978721 42979065 -156651085 + AluSq SINE Alu 3 341 0 615 335 88 20 chr5 42979092 42979388 -156650762 + L2 LINE L2 2953 3268 -4 1413 98 24 0 chr5 42979928 42980133 -156650017 + L1PA10 LINE L1 5959 6168 0 29 0 0 0 chr5 42980133 42980162 -156649988 + AT_rich Low_complexity Low_complexity 1 29 0 203 143 0 24 chr5 42982221 42982263 -156647887 + (TATG)n Simple_repeat Simple_repeat 4 44 0 834 267 40 25 chr5 42982278 42982634 -156647516 + MER93b LTR ERV1 12 401 -2 358 251 216 8 chr5 42983709 42983842 -156646308 - MER5A DNA MER1_type -1 188 26 425 296 121 47 chr5 42984164 42984593 -156645557 + L1MC4 LINE L1 7577 8037 -5 445 281 62 0 chr5 42986608 42986768 -156643382 - MIR SINE MIR -2 260 91 383 247 51 51 chr5 42986833 42987011 -156643139 - MER5B DNA MER1_type 0 178 1 1785 201 63 36 chr5 42987055 42987528 -156642622 + MLT1D LTR MaLR 1 486 -19 308 189 14 0 chr5 42987528 42987602 -156642548 + (TA)n Simple_repeat Simple_repeat 2 76 0 354 98 0 0 chr5 42987847 42987898 -156642252 + (CA)n Simple_repeat Simple_repeat 2 52 0 243 79 0 0 chr5 42988150 42988188 -156641962 + (A)n Simple_repeat Simple_repeat 1 38 0 252 275 0 25 chr5 42988279 42988359 -156641791 + MIR SINE MIR 181 258 -4 236 344 45 57 chr5 42988372 42988529 -156641621 - L2 LINE L2 -19 3253 3099 310 21 21 21 chr5 42989520 42989568 -156640582 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 4987 24 0 7 chr5 42989571 42990159 -156639991 - L1PA2 LINE L1 -6 6149 5566 1637 160 128 2 chr5 42990437 42990836 -156639314 - Charlie1 DNA MER1_type 0 2761 2313 645 271 0 6 chr5 42990831 42990997 -156639153 - Charlie1 DNA MER1_type -2596 165 1 * 4705 55 5 0 chr5 42991468 42992091 -156638059 + L1PA8 LINE L1 5566 6191 0 952 202 35 5 chr5 42992846 42993049 -156637101 + MER3 DNA MER1_type 1 209 0 275 326 97 35 chr5 42993782 42993926 -156636224 + MIR SINE MIR 65 217 -45 206 310 55 48 chr5 42994237 42994382 -156635768 - L2 LINE L2 -662 2652 2507 501 295 145 10 chr5 42994871 42995064 -156635086 + L3 LINE CR1 549 767 -810 594 65 54 0 chr5 42995089 42995182 -156634968 + L1MB3 LINE L1 6084 6181 -2 200 163 23 0 chr5 42995208 42995251 -156634899 + (TA)n Simple_repeat Simple_repeat 2 45 0 7456 192 17 6 chr5 42995995 42998338 -156631812 + L1PA15 LINE L1 3820 6163 -2 231 273 0 0 chr5 42998658 42998713 -156631437 + MER91 DNA MER1_type 9 63 -77 17336 44 1 0 chr5 42999144 43002072 -156628078 - L1PA5 LINE L1 -2 6152 3223 2259 108 0 3 chr5 43002605 43002902 -156627248 - AluSq SINE Alu -17 296 1 320 361 27 33 chr5 43003642 43003825 -156626325 + L1MC4a LINE L1 5717 5898 -1910 801 227 134 28 chr5 43003852 43004068 -156626082 + MIR SINE MIR 2 240 -22 396 0 0 0 chr5 43004074 43004118 -156626032 + (TA)n Simple_repeat Simple_repeat 2 45 0 200 200 18 91 chr5 43004752 43004807 -156625343 - L2 LINE L2 -5 3267 3217 261 0 0 0 chr5 43004892 43004921 -156625229 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 456 176 0 0 chr5 43005474 43005559 -156624591 + L1MB3 LINE L1 5824 5908 -275 1949 132 7 0 chr5 43005559 43005839 -156624311 + AluSx SINE Alu 1 282 -30 1010 185 0 38 chr5 43005915 43006126 -156624024 - MER3 DNA MER1_type -3 206 4 963 257 9 0 chr5 43006270 43006492 -156623658 - MER58A DNA MER1_type 0 224 1 2216 144 24 27 chr5 43006847 43007223 -156622927 + THE1C LTR MaLR 1 375 0 2267 60 0 3 chr5 43008865 43009193 -156620957 + AluY SINE Alu 1 327 0 24 32 0 0 chr5 43009427 43009458 -156620692 + AT_rich Low_complexity Low_complexity 1 31 0 567 275 144 18 chr5 43009745 43009967 -156620183 + MIR SINE MIR 13 262 0 286 192 0 64 chr5 43010482 43010560 -156619590 - L1PA13 LINE L1 -17 6146 6074 4665 97 7 10 chr5 43010724 43011426 -156618724 - L1PA12 LINE L1 -42 6126 5427 335 246 57 80 chr5 43012294 43012469 -156617681 - L1MC4 LINE L1 -6 8036 7866 411 293 131 15 chr5 43014462 43014660 -156615490 - MIR SINE MIR -10 252 32 455 311 37 6 chr5 43014776 43014937 -156615213 + MER5B DNA MER1_type 13 178 0 941 134 70 6 chr5 43014974 43015145 -156615005 - MER5A DNA MER1_type -7 182 1 2240 129 0 0 chr5 43015320 43015629 -156614521 + AluSx SINE Alu 1 309 -3 590 187 12 102 chr5 43016040 43016206 -156613944 + MER20 DNA MER1_type 1 151 -68 301 207 0 0 chr5 43016225 43016283 -156613867 + MER20 DNA MER1_type 101 158 -61 229 256 49 82 chr5 43016804 43016876 -156613274 + L1MEd LINE L1 915 988 -5131 497 220 28 0 chr5 43016876 43016985 -156613165 + MER81 DNA DNA 1 112 -2 229 256 49 82 chr5 43016985 43017217 -156612933 + L1MEd LINE L1 988 1209 -4910 905 238 15 5 chr5 43017235 43017441 -156612709 + MER58A DNA MER1_type 1 208 -16 290 298 35 7 chr5 43017602 43017743 -156612407 + HAL1 LINE L1 1503 1647 -860 401 290 0 0 chr5 43017856 43017956 -156612194 + MLT1I LTR MaLR 79 178 -231 1800 88 0 8 chr5 43018071 43018320 -156611830 + L1PA8A LINE L1 5885 6131 0 315 0 0 0 chr5 43018340 43018375 -156611775 + (CA)n Simple_repeat Simple_repeat 2 36 0 2047 131 0 0 chr5 43018467 43018776 -156611374 + AluSx SINE Alu 1 309 0 568 283 57 42 chr5 43018804 43019623 -156610527 + L1ME LINE L1 4793 5617 -504 185 262 0 66 chr5 43020869 43020930 -156609220 + L2 LINE L2 2700 2756 -558 627 155 9 17 chr5 43020955 43021071 -156609079 + MLT1A1 LTR MaLR 7 121 -244 924 226 21 29 chr5 43021232 43021475 -156608675 + MLT1A1 LTR MaLR 125 365 0 268 298 89 21 chr5 43021475 43021715 -156608435 + L2 LINE L2 2793 3046 -267 * 282 288 24 56 chr5 43021691 43021816 -156608334 + MER5B DNA MER1_type 58 178 0 484 179 278 40 chr5 43021981 43022056 -156608094 + MER5A DNA MER1_type 2 58 -131 2102 94 0 47 chr5 43022056 43022202 -156607948 + AluSq SINE Alu 1 152 -156 2357 88 0 10 chr5 43022202 43022510 -156607640 + AluY SINE Alu 1 305 -6 2102 94 0 47 chr5 43022510 43022685 -156607465 + AluSq SINE Alu 152 308 0 484 179 278 40 chr5 43022685 43022759 -156607391 + MER5A DNA MER1_type 58 188 -1 305 250 36 0 chr5 43022794 43022878 -156607272 + L2 LINE L2 3186 3272 0 447 365 19 9 chr5 43023968 43024182 -156605968 + MIR SINE MIR 7 222 -40 213 319 66 11 chr5 43024268 43024359 -156605791 - MIR SINE MIR -8 254 159 467 33 16 0 chr5 43024361 43024422 -156605728 + (CAT)n Simple_repeat Simple_repeat 2 63 0 470 314 142 34 chr5 43024791 43025228 -156604922 + L1ME4a LINE L1 5579 6062 -59 1419 186 52 35 chr5 43025231 43025521 -156604629 - AluJo SINE Alu -4 308 14 2259 98 7 0 chr5 43025570 43025867 -156604283 - AluSq SINE Alu -14 299 1 2389 93 0 0 chr5 43026041 43026351 -156603799 - AluY SINE Alu -1 310 1 207 0 0 0 chr5 43027929 43027952 -156602198 + (TG)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr5 43028016 43028044 -156602106 + AT_rich Low_complexity Low_complexity 1 28 0 780 228 41 0 chr5 43029058 43029229 -156600921 + MER5B DNA MER1_type 1 178 0 2393 64 3 26 chr5 43029387 43029698 -156600452 + AluY SINE Alu 3 306 -5 2761 56 15 6 chr5 43029985 43030323 -156599827 + SVA Other Other 707 1047 -339 2146 105 0 0 chr5 43030928 43031204 -156598946 - AluSg SINE Alu -13 297 22 183 182 0 0 chr5 43031394 43031427 -156598723 + L2 LINE L2 3020 3052 -220 225 94 0 0 chr5 43032713 43032745 -156597405 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 42805 53 2 0 chr5 43032747 43038889 -156591261 - L1PA5 LINE L1 -4 6150 2 644 80 35 9 chr5 43038889 43039002 -156591148 + CT-rich Low_complexity Low_complexity 1 116 0 802 160 22 13 chr5 43039013 43039241 -156590909 + CT-rich Low_complexity Low_complexity 1 230 0 863 154 58 19 chr5 43039708 43039864 -156590286 - THE1C LTR MaLR -213 162 1 25 51 0 0 chr5 43041002 43041041 -156589109 + AT_rich Low_complexity Low_complexity 1 39 0 216 255 0 0 chr5 43041237 43041288 -156588862 + CT-rich Low_complexity Low_complexity 2 52 0 406 206 14 21 chr5 43041507 43041618 -156588532 - L1MA4A LINE L1 -201 6102 5983 22 0 0 0 chr5 43042032 43042054 -156588096 + AT_rich Low_complexity Low_complexity 1 22 0 248 250 0 0 chr5 43042558 43042614 -156587536 + MER5B DNA MER1_type 2 57 -121 581 315 73 76 chr5 43043142 43043679 -156586471 + L1MEd LINE L1 535 1069 -5050 26 30 0 0 chr5 43043882 43043915 -156586235 + AT_rich Low_complexity Low_complexity 1 33 0 794 239 0 5 chr5 43044187 43044388 -156585762 - L1P LINE L1 -989 5157 4958 3131 144 16 63 chr5 43044388 43044985 -156585165 + L1PB4 LINE L1 5567 6154 -2 221 231 0 31 chr5 43045338 43045403 -156584747 + (TA)n Simple_repeat Simple_repeat 1 63 0 31 76 0 0 chr5 43045469 43045535 -156584615 + AT_rich Low_complexity Low_complexity 1 66 0 292 278 89 58 chr5 43046040 43046231 -156583919 - L2 LINE L2 0 3313 3117 468 210 10 0 chr5 43047145 43047245 -156582905 + L1MA8 LINE L1 5990 6090 -201 274 0 73 0 chr5 43047457 43047498 -156582652 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 351 290 66 50 chr5 43048253 43048556 -156581594 + L1ME2 LINE L1 904 1211 -4908 1146 280 63 95 chr5 43048747 43049336 -156580814 + L1ME1 LINE L1 1013 1545 -4851 183 42 0 0 chr5 43049336 43049360 -156580790 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1146 280 63 95 chr5 43049360 43049980 -156580170 + L1ME1 LINE L1 1545 2183 -4213 513 217 42 0 chr5 43049959 43050079 -156580071 + L1MA6 LINE L1 117 241 -6608 * 13831 196 43 27 chr5 43050096 43054303 -156575847 + L1MA6 LINE L1 2720 6997 -5 4269 235 147 11 chr5 43054323 43056208 -156573942 + L1ME1 LINE L1 2804 4931 -1917 1680 216 113 73 chr5 43056208 43056827 -156573323 + L1ME1 LINE L1 6213 6856 -12 352 255 143 31 chr5 43056968 43057129 -156573021 + L2 LINE L2 3134 3312 -1 1912 167 3 0 chr5 43057133 43057439 -156572711 + AluSx SINE Alu 1 307 -5 262 322 120 12 chr5 43057519 43057777 -156572373 + L1ME2 LINE L1 2240 2525 -3604 631 250 33 0 chr5 43057777 43057961 -156572189 - L1M4 LINE L1 -1891 4255 4066 369 270 63 31 chr5 43057977 43058136 -156572014 + L1ME2 LINE L1 4982 5145 -984 1623 226 52 30 chr5 43058139 43058599 -156571551 + L1MC4a LINE L1 7320 8026 -16 287 155 35 0 chr5 43058630 43058688 -156571462 + L1MD3 LINE L1 7925 7984 -11 227 268 14 0 chr5 43058739 43058810 -156571340 + L1ME2 LINE L1 5198 5269 -860 210 148 59 30 chr5 43060477 43060578 -156569572 + (TA)n Simple_repeat Simple_repeat 2 105 0 * 228 141 47 47 chr5 43060503 43060588 -156569562 + (TTATA)n Simple_repeat Simple_repeat 5 89 0 3040 181 56 3 chr5 43060644 43061217 -156568933 + MER6A DNA MER2_type 1 603 -2 2244 115 0 7 chr5 43062879 43063184 -156566966 + AluSx SINE Alu 1 303 -9 192 320 77 0 chr5 43063401 43063479 -156566671 - MIR SINE MIR -175 87 4 21 36 0 0 chr5 43063908 43063936 -156566214 + AT_rich Low_complexity Low_complexity 1 28 0 390 304 0 26 chr5 43064332 43064447 -156565703 - MIR3 SINE MIR -21 187 76 247 330 45 62 chr5 43064510 43064686 -156565464 + MER5B DNA MER1_type 1 173 -5 514 275 75 31 chr5 43064886 43065046 -156565104 - MER91B DNA MER1_type -9 181 15 810 271 49 26 chr5 43065663 43065907 -156564243 - MIR SINE MIR 0 262 12 198 143 0 0 chr5 43066259 43066294 -156563856 + (CA)n Simple_repeat Simple_repeat 1 35 0 268 261 70 57 chr5 43067499 43067656 -156562494 - MER117 DNA MER1_type -38 159 1 2572 213 37 12 chr5 43068485 43069073 -156561077 + L1ME2 LINE L1 5417 6019 -128 438 224 44 2 chr5 43069202 43069328 -156560822 + L1ME2 LINE L1 6023 6316 -1 354 355 41 29 chr5 43069334 43069506 -156560644 - MIR3 SINE MIR -28 180 7 1733 262 119 104 chr5 43070103 43071168 -156558982 + L2 LINE L2 1658 2705 -609 2239 100 3 0 chr5 43071168 43071458 -156558692 + AluSp SINE Alu 1 291 -22 266 0 0 29 chr5 43071458 43071493 -156558657 + (TTAAA)n Simple_repeat Simple_repeat 2 35 0 1733 262 119 104 chr5 43071493 43071598 -156558552 + L2 LINE L2 2704 2847 -467 363 293 109 89 chr5 43071624 43072017 -156558133 + L2 LINE L2 2907 3307 -6 569 274 80 25 chr5 43073130 43073331 -156556819 + MIR SINE MIR 2 213 -49 8650 139 6 12 chr5 43073344 43075540 -156554610 - L1PA11 LINE L1 -4 6170 3971 252 398 0 0 chr5 43076113 43076201 -156553949 + L2 LINE L2 2979 3066 -206 9596 226 60 30 chr5 43076320 43079659 -156550491 + L1M3e LINE L1 1104 4318 -2788 1588 185 58 21 chr5 43079659 43079989 -156550161 - MER2 DNA MER2_type -2 342 1 9596 226 60 30 chr5 43079989 43081405 -156548745 + L1M3e LINE L1 4318 5690 -1416 291 228 291 8 chr5 43082221 43082348 -156547802 + MLT1F LTR MaLR 380 542 0 312 351 34 58 chr5 43082384 43082495 -156547655 + L2 LINE L2 2104 2216 -1098 2308 94 3 0 chr5 43082495 43082792 -156547358 + AluSg SINE Alu 2 299 -11 312 351 34 58 chr5 43082792 43082973 -156547177 + L2 LINE L2 2216 2389 -925 756 296 28 16 chr5 43083077 43083324 -156546826 - MIR SINE MIR -12 250 1 308 345 142 19 chr5 43083325 43083635 -156546515 + L2 LINE L2 2494 2841 -473 586 333 89 48 chr5 43084135 43084817 -156545333 - L2 LINE L2 -467 2847 2138 937 235 78 0 chr5 43086313 43086530 -156543620 - MIR SINE MIR 0 262 29 827 228 67 12 chr5 43087089 43087343 -156542807 + MER46C DNA MER2_type 60 327 -11 22 70 0 0 chr5 43089471 43089514 -156540636 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr5 43090134 43090169 -156539981 + AT_rich Low_complexity Low_complexity 1 35 0 370 275 83 31 chr5 43090201 43090394 -156539756 + MLT1H LTR MaLR 25 227 -322 189 0 0 0 chr5 43090557 43090578 -156539572 + (TCTCCC)n Simple_repeat Simple_repeat 4 24 0 5436 82 26 52 chr5 43090605 43092003 -156538147 + SVA Other Other 14 1047 -339 1389 207 108 13 chr5 43092411 43092725 -156537425 - MER2 DNA MER2_type 0 344 1 2019 198 103 65 chr5 43092928 43093219 -156536931 - Charlie2 DNA MER1_type -1 2861 2583 563 154 0 0 chr5 43093219 43093310 -156536840 - L1MC1 LINE L1 0 6333 6243 2019 198 103 65 chr5 43093310 43093936 -156536214 - Charlie2 DNA MER1_type -279 2583 1909 273 242 40 166 chr5 43094026 43094303 -156535847 - Charlie2 DNA MER1_type -2540 242 1 595 137 170 142 chr5 43096503 43096660 -156533490 - MER20 DNA MER1_type -1 218 52 2441 70 0 0 chr5 43096660 43096958 -156533192 - AluY SINE Alu -5 306 9 595 137 170 142 chr5 43096958 43097012 -156533138 - MER20 DNA MER1_type -167 52 1 225 240 0 0 chr5 43097185 43097235 -156532915 - L2 LINE L2 0 3313 3264 39854 62 2 0 chr5 43100067 43106189 -156523961 + L1PA5 LINE L1 17 6151 -3 896 348 104 36 chr5 43106487 43106987 -156523163 + L2 LINE L2 1681 2145 -1169 1634 178 152 13 chr5 43106987 43107363 -156522787 - MSTA LTR MaLR 0 428 1 8815 146 30 29 chr5 43107363 43108938 -156521212 - MSTA-int LTR MaLR 0 1580 3 1850 154 152 13 chr5 43108940 43109316 -156520834 - MSTA LTR MaLR 0 428 1 896 348 104 36 chr5 43109316 43109846 -156520304 + L2 LINE L2 2145 2786 -528 1825 191 74 51 chr5 43109870 43110357 -156519793 + MLT1D LTR MaLR 1 498 -7 180 0 0 0 chr5 43110724 43110744 -156519406 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 212 247 144 41 chr5 43110787 43110884 -156519266 + L2 LINE L2 3205 3311 -2 517 298 28 44 chr5 43111307 43111488 -156518662 + MER5B DNA MER1_type 1 178 0 193 224 209 0 chr5 43111621 43111688 -156518462 - L2 LINE L2 -25 3288 3208 268 221 38 99 chr5 43111701 43111832 -156518318 + L2 LINE L2 3191 3313 0 2270 124 17 0 chr5 43112669 43113023 -156517127 - MLT1B LTR MaLR 0 390 31 291 295 61 43 chr5 43113189 43113327 -156516823 - MIR3 SINE MIR -67 141 15 412 274 78 69 chr5 43114456 43114660 -156515490 - L2 LINE L2 -13 3300 3095 835 262 104 50 chr5 43114719 43115231 -156514919 + MLT1G LTR MaLR 1 580 -15 734 260 100 111 chr5 43115253 43115711 -156514439 - L2 LINE L2 -277 3036 2596 2346 53 0 0 chr5 43115711 43116023 -156514127 + AluY SINE Alu 1 312 0 734 260 100 111 chr5 43116023 43116427 -156513723 - L2 LINE L2 -717 2596 2189 278 200 89 22 chr5 43116461 43116551 -156513599 - L2 LINE L2 -1067 2247 2152 494 289 20 0 chr5 43116575 43116727 -156513423 - L2 LINE L2 -1635 1679 1525 391 350 25 19 chr5 43116768 43116928 -156513222 + L2 LINE L2 3111 3271 -1 732 244 27 58 chr5 43117154 43117412 -156512738 - MIR SINE MIR 0 262 13 1098 260 79 23 chr5 43117569 43118039 -156512111 + L1MC4a LINE L1 5263 5758 -2050 390 286 36 85 chr5 43118055 43118303 -156511847 + L1MC4a LINE L1 5819 6054 -1754 819 266 80 0 chr5 43118461 43118698 -156511452 - MIR SINE MIR 0 262 7 866 254 8 54 chr5 43118994 43119115 -156511035 - MIR SINE MIR -3 259 153 1500 178 60 97 chr5 43119115 43119598 -156510552 + MLT1C LTR MaLR 1 465 -2 866 254 8 54 chr5 43119598 43119716 -156510434 - MIR SINE MIR -109 153 31 21 0 0 0 chr5 43120085 43120106 -156510044 + AT_rich Low_complexity Low_complexity 1 21 0 2246 101 0 13 chr5 43121742 43122059 -156508091 + AluSq SINE Alu 1 313 0 449 272 41 59 chr5 43122562 43122731 -156507419 - MER5B DNA MER1_type -5 173 8 2072 146 0 0 chr5 43123224 43123519 -156506631 + AluSx SINE Alu 1 295 -17 302 181 71 0 chr5 43123898 43123906 -156506244 + (TA)n Simple_repeat Simple_repeat 2 8 -129 1470 146 60 86 chr5 43123906 43123950 -156506200 - THE1C LTR MaLR 0 375 331 2029 117 7 7 chr5 43123950 43124241 -156505909 + AluSx SINE Alu 6 296 -16 1470 146 60 86 chr5 43124241 43124426 -156505724 - THE1C LTR MaLR -44 331 157 2273 103 0 7 chr5 43124426 43124728 -156505422 + AluSq SINE Alu 1 300 -13 1470 146 60 86 chr5 43124728 43124882 -156505268 - THE1C LTR MaLR -218 157 1 302 181 71 0 chr5 43124882 43125000 -156505150 + (TA)n Simple_repeat Simple_repeat 8 137 0 359 264 218 28 chr5 43125180 43125396 -156504754 - MIR SINE MIR 0 262 6 247 254 211 35 chr5 43125474 43125616 -156504534 - MIR SINE MIR -88 174 8 1147 180 150 26 chr5 43127318 43127624 -156502526 + MER2 DNA MER2_type 1 344 0 347 245 98 0 chr5 43130516 43130618 -156499532 + MIR SINE MIR 148 259 -3 295 246 82 27 chr5 43130876 43130986 -156499164 - MER5A DNA MER1_type -26 163 48 183 42 0 0 chr5 43131202 43131226 -156498924 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1990 135 0 3 chr5 43132602 43132908 -156497242 + AluSx SINE Alu 1 305 0 2092 125 34 0 chr5 43136171 43136466 -156493684 + AluSx SINE Alu 1 305 -7 1784 136 55 27 chr5 43141186 43141516 -156488634 - MER44D DNA MER2_type 0 609 1 23 0 0 0 chr5 43142173 43142196 -156487954 + AT_rich Low_complexity Low_complexity 1 23 0 187 235 0 39 chr5 43143881 43143932 -156486218 - L3 LINE CR1 -5 1572 1524 210 200 67 0 chr5 43144532 43144577 -156485573 + L2 LINE L2 3224 3271 -1 201 176 0 0 chr5 43144675 43144709 -156485441 + T-rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr5 43146474 43146495 -156483655 + AT_rich Low_complexity Low_complexity 1 21 0 2130 109 0 3 chr5 43146519 43146813 -156483337 - AluSx SINE Alu -19 293 1 368 221 30 0 chr5 43148983 43149114 -156481036 + (TA)n Simple_repeat Simple_repeat 1 135 0 330 275 63 41 chr5 43149609 43149757 -156480393 + MIR3 SINE MIR 37 187 -21 437 304 69 20 chr5 43152827 43152936 -156477214 - MIR SINE MIR -36 226 124 2047 90 0 22 chr5 43152936 43153214 -156476936 - AluSg SINE Alu -4 306 35 437 304 69 20 chr5 43153214 43153308 -156476842 - MIR SINE MIR -138 124 13 207 281 18 18 chr5 43153401 43153458 -156476692 + L2 LINE L2 3124 3180 -92 1323 232 169 23 chr5 43153905 43154521 -156475629 + LTR50 LTR ERVL 1 706 -89 406 156 130 0 chr5 43154529 43154606 -156475544 + 5S rRNA rRNA 2 88 -33 2244 77 20 17 chr5 43157235 43157533 -156472617 - AluSq SINE Alu -14 299 1 349 329 186 0 chr5 43158472 43158682 -156471468 + MIR SINE MIR 6 254 -8 1985 104 36 93 chr5 43158683 43158732 -156471418 - THE1B LTR MaLR 0 364 314 342 0 0 0 chr5 43158732 43158770 -156471380 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 831 176 0 0 chr5 43158770 43158918 -156471232 - FRAM SINE Alu -18 148 1 1985 104 36 93 chr5 43158918 43159253 -156470897 - THE1B LTR MaLR -48 316 1 2089 145 0 3 chr5 43159415 43159719 -156470431 - AluSq SINE Alu -10 303 1 448 275 25 17 chr5 43159968 43160088 -156470062 + MER5B DNA MER1_type 37 157 -21 255 321 23 23 chr5 43160163 43160294 -156469856 - MIR3 SINE MIR -24 184 54 2168 33 7 0 chr5 43160892 43161165 -156468985 - L1PA4 LINE L1 -263 5892 5618 2002 45 0 0 chr5 43161165 43161409 -156468741 + L1PA4 LINE L1 5911 6155 0 216 210 16 0 chr5 43161415 43161477 -156468673 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 2231 113 0 19 chr5 43161562 43161880 -156468270 - AluSx SINE Alu 0 312 1 1989 105 59 0 chr5 43164217 43164503 -156465647 - AluSg SINE Alu -7 303 1 414 288 102 19 chr5 43169410 43169615 -156460535 - L2 LINE L2 -1 3312 3091 231 169 65 65 chr5 43169744 43169821 -156460329 - MIR SINE MIR -111 151 75 408 301 68 30 chr5 43171868 43172001 -156458149 - L2 LINE L2 -20 3252 3115 1792 89 24 0 chr5 43174064 43174312 -156455838 + L1PA7 LINE L1 5901 6154 0 224 298 169 16 chr5 43175907 43176031 -156454119 - MIR SINE MIR -118 144 2 192 371 133 9 chr5 43176149 43176254 -156453896 - MIR SINE MIR -131 131 14 230 220 60 0 chr5 43176389 43176439 -156453711 + MIR SINE MIR 54 106 -156 395 217 322 0 chr5 43177033 43177148 -156453002 - MER5A DNA MER1_type -37 152 1 570 295 74 11 chr5 43178357 43178547 -156451603 - MIR SINE MIR -50 212 11 1760 136 0 50 chr5 43178776 43179100 -156451050 + AluSx SINE Alu 1 282 -30 437 0 0 19 chr5 43181473 43181527 -156448623 + (CA)n Simple_repeat Simple_repeat 2 54 0 345 324 58 24 chr5 43185443 43185490 -156444660 + L1MC4a LINE L1 5636 5680 -2128 2075 89 48 20 chr5 43185490 43185782 -156444368 - AluSg1 SINE Alu -9 300 1 345 324 58 24 chr5 43185782 43186027 -156444123 + L1MC4a LINE L1 5680 5938 -1870 3568 98 23 52 chr5 43186371 43187105 -156443045 + SVA Other Other 433 1047 -339 1537 191 115 19 chr5 43187512 43187826 -156442324 - MER2 DNA MER2_type 0 344 1 2420 199 103 65 chr5 43188029 43188320 -156441830 - Charlie2 DNA MER1_type -1 2861 2582 611 154 0 0 chr5 43188320 43188411 -156441739 - L1MC1 LINE L1 0 6333 6243 2420 199 103 65 chr5 43188411 43189044 -156441106 - Charlie2 DNA MER1_type -280 2582 1902 360 239 37 175 chr5 43189107 43189404 -156440746 - Charlie2 DNA MER1_type -2606 256 1 481 142 236 68 chr5 43191604 43191752 -156438398 - MER20 DNA MER1_type -1 218 46 2484 81 0 0 chr5 43191761 43192068 -156438082 - AluY SINE Alu -4 307 1 225 0 0 0 chr5 43193646 43193671 -156436479 + (TG)n Simple_repeat Simple_repeat 2 26 0 783 228 41 0 chr5 43194780 43194951 -156435199 + MER5B DNA MER1_type 1 178 0 502 321 110 51 chr5 43197906 43198558 -156431592 + L2 LINE L2 2157 2847 -467 1218 156 29 37 chr5 43199017 43199261 -156430889 + L1MB5 LINE L1 5929 6170 -4 1834 102 25 4 chr5 43200665 43200986 -156429164 + AluSg SINE Alu 1 327 0 1602 159 4 8 chr5 43201511 43201768 -156428382 + AluJo SINE Alu 45 300 -12 2290 90 0 17 chr5 43201791 43202091 -156428059 + AluY SINE Alu 1 295 -16 2282 103 0 7 chr5 43202105 43202406 -156427744 + AluSq SINE Alu 5 303 -10 648 130 0 0 chr5 43202422 43202514 -156427636 + AluSg/x SINE Alu 213 304 -8 931 153 23 34 chr5 43202592 43202768 -156427382 - AluJb SINE Alu -9 303 130 414 176 186 29 chr5 43204280 43204382 -156425768 + MER2 DNA MER2_type 225 342 -3 1786 78 22 19 chr5 43204779 43205049 -156425101 - SVA Other Other -339 1047 777 606 278 0 0 chr5 43205361 43205674 -156424476 + (TGAA)n Simple_repeat Simple_repeat 1 313 0 602 238 4 0 chr5 43205694 43205982 -156424168 + (TGAA)n Simple_repeat Simple_repeat 1 289 0 * 750 211 0 0 chr5 43205949 43206129 -156424021 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 2126 147 0 0 chr5 43206932 43207232 -156422918 - AluSx SINE Alu -12 300 1 469 179 12 0 chr5 43207233 43207317 -156422833 - MIR SINE MIR -115 147 63 210 118 0 0 chr5 43207323 43207357 -156422793 + (A)n Simple_repeat Simple_repeat 1 34 0 2013 148 0 3 chr5 43207368 43207671 -156422479 + AluJb SINE Alu 2 303 -9 2345 81 3 10 chr5 43207671 43207979 -156422171 + AluY SINE Alu 1 306 -5 1061 147 29 0 chr5 43207999 43208169 -156421981 + AluSg/x SINE Alu 135 309 -1 327 253 0 44 chr5 43208176 43208267 -156421883 - MER3 DNA MER1_type -122 87 1 1818 133 68 28 chr5 43208976 43209300 -156420850 + MER44D DNA MER2_type 1 607 -2 925 235 78 0 chr5 43210699 43210916 -156419234 + MIR SINE MIR 29 262 0 288 290 76 92 chr5 43212532 43212663 -156417487 - MER5B DNA MER1_type -49 129 1 206 269 172 21 chr5 43213085 43213178 -156416972 - L2 LINE L2 -2 3311 3205 1929 192 81 48 chr5 43213599 43214079 -156416071 - MLT1D LTR MaLR -4 501 6 539 335 101 38 chr5 43214106 43214631 -156415519 - L2 LINE L2 -528 2786 2229 823 174 115 73 chr5 43214631 43214918 -156415232 + MSTA LTR MaLR 1 299 -129 516 244 118 63 chr5 43215376 43215566 -156414584 - L1MC5 LINE L1 -196 7765 7587 2188 119 0 0 chr5 43215566 43215860 -156414290 - AluSx SINE Alu -17 295 2 516 244 118 63 chr5 43215860 43216100 -156414050 - L1MC5 LINE L1 -374 7587 7311 190 215 139 25 chr5 43216587 43216666 -156413484 - L2 LINE L2 -165 3148 3061 1306 232 56 19 chr5 43216673 43216996 -156413154 - MLT1C LTR MaLR 0 467 133 243 268 14 28 chr5 43217395 43217466 -156412684 + Charlie4 DNA MER1_type 1883 1952 -9 193 250 0 0 chr5 43217658 43217698 -156412452 - MIR SINE MIR -129 79 40 515 281 3 123 chr5 43217772 43218096 -156412054 + L3 LINE CR1 1036 1320 -257 450 186 133 0 chr5 43218110 43218223 -156411927 + MLT1C LTR MaLR 6 133 -334 395 332 133 15 chr5 43218322 43218518 -156411632 + MIR SINE MIR 23 241 -21 437 307 117 16 chr5 43218575 43218898 -156411252 + L1ME3A LINE L1 5585 5936 -234 716 240 143 10 chr5 43219111 43219307 -156410843 - MIR SINE MIR -38 224 3 1471 102 0 0 chr5 43219485 43219671 -156410479 - AluSg1 SINE Alu -123 186 1 214 164 36 0 chr5 43219972 43220027 -156410123 + (TG)n Simple_repeat Simple_repeat 2 58 0 223 240 0 20 chr5 43220685 43220735 -156409415 + CT-rich Low_complexity Low_complexity 1 49 0 237 65 0 0 chr5 43220742 43220773 -156409377 + (CA)n Simple_repeat Simple_repeat 1 31 0 517 268 51 19 chr5 43220843 43221000 -156409150 + MER63A DNA MER1_type 49 210 0 496 333 91 9 chr5 43221232 43221442 -156408708 + MIR SINE MIR 36 262 0 1392 274 44 27 chr5 43221648 43222154 -156407996 + L2 LINE L2 2555 3064 -249 369 216 167 10 chr5 43222154 43222256 -156407894 + MLT1C LTR MaLR 7 124 -343 284 221 21 21 chr5 43222361 43222456 -156407694 + L1MC5 LINE L1 7840 7934 -27 375 78 0 0 chr5 43222482 43222533 -156407617 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 735 174 0 0 chr5 43223441 43223550 -156406600 + AluJb SINE Alu 179 287 -25 315 239 22 43 chr5 43223551 43223643 -156406507 - L1MC4 LINE L1 -1339 6703 6614 2376 121 28 36 chr5 43223647 43224011 -156406139 + THE1B LTR MaLR 4 364 0 187 368 26 26 chr5 43224014 43224131 -156406019 - MIR SINE MIR -62 200 84 304 127 48 0 chr5 43226649 43226712 -156403438 + GA-rich Low_complexity Low_complexity 4 69 0 213 121 0 0 chr5 43228129 43228162 -156401988 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 22 80 0 0 chr5 43228169 43228219 -156401931 + AT_rich Low_complexity Low_complexity 1 50 0 1653 156 18 127 chr5 43228232 43228617 -156401533 + MER7A DNA MER2_type 1 341 -5 1813 132 3 43 chr5 43228862 43229166 -156400984 - AluSx SINE Alu -20 292 1 180 0 0 0 chr5 43229805 43229825 -156400325 + (TA)n Simple_repeat Simple_repeat 2 21 0 1849 155 0 20 chr5 43229894 43230191 -156399959 + AluJb SINE Alu 1 291 -21 321 135 0 0 chr5 43230192 43230244 -156399906 + (TA)n Simple_repeat Simple_repeat 1 52 0 247 233 47 0 chr5 43230249 43230335 -156399815 - L1MC4 LINE L1 -1339 6703 6614 238 255 0 43 chr5 43230259 43230353 -156399797 + L1MC4 LINE L1 6614 6703 -1339 * 226 274 55 0 chr5 43230335 43230408 -156399742 - L1MC4 LINE L1 -1349 6693 6617 * 366 183 0 0 chr5 43230411 43230482 -156399668 + (TA)n Simple_repeat Simple_repeat 1 71 0 322 297 41 41 chr5 43231177 43231322 -156398828 + HAL1 LINE L1 2307 2451 -56 325 316 39 124 chr5 43231622 43231977 -156398173 + L2 LINE L2 2948 3272 0 468 232 83 18 chr5 43232104 43232272 -156397878 + MER104 DNA MER2_type 2 180 0 1239 106 252 0 chr5 43233260 43233516 -156396634 - AluSx SINE Alu 0 313 1 1706 215 65 70 chr5 43233841 43234398 -156395752 - MLT2B3 LTR ERVL 0 554 1 2054 98 0 0 chr5 43234521 43234786 -156395364 - AluSx SINE Alu -45 267 3 189 189 47 9 chr5 43235654 43235760 -156394390 + (TA)n Simple_repeat Simple_repeat 2 111 0 401 344 172 0 chr5 43235772 43235999 -156394151 + L3 LINE CR1 1304 1569 -8 1146 189 65 119 chr5 43236303 43236715 -156393435 + MLT1C LTR MaLR 1 467 0 195 42 0 0 chr5 43236792 43236816 -156393334 + (CA)n Simple_repeat Simple_repeat 1 24 0 494 297 21 81 chr5 43236917 43237250 -156392900 - L1MC4 LINE L1 -1962 5846 5534 1502 96 0 19 chr5 43237596 43237804 -156392346 - AluY SINE Alu -10 301 98 358 219 26 3 chr5 43238941 43239030 -156391120 + L1MC/D LINE L1 5680 5766 -400 192 406 83 0 chr5 43239507 43239640 -156390510 - MIR3 SINE MIR -2 206 63 2201 66 10 7 chr5 43240122 43240442 -156389708 - AluY SINE Alu 0 321 1 1175 302 63 2 chr5 43242988 43243399 -156386751 + L2 LINE L2 2169 2604 -710 2006 122 7 0 chr5 43243468 43243785 -156386365 + AluSc SINE Alu 1 319 0 310 395 59 9 chr5 43243822 43244082 -156386068 + L2 LINE L2 2787 3054 -259 1161 284 91 30 chr5 43244087 43244559 -156385591 - LTR33A LTR ERVL 0 523 23 280 258 45 45 chr5 43244688 43244777 -156385373 + L2 LINE L2 3221 3309 -4 33 43 0 0 chr5 43245196 43245243 -156384907 + AT_rich Low_complexity Low_complexity 1 47 0 309 291 115 64 chr5 43245446 43245680 -156384470 - L3b LINE CR1 -27 1556 1311 603 288 107 17 chr5 43246221 43246454 -156383696 - MIR SINE MIR -1 261 8 318 106 0 0 chr5 43247160 43247207 -156382943 + (TA)n Simple_repeat Simple_repeat 2 48 0 189 121 0 0 chr5 43247234 43247267 -156382883 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 184 338 97 28 chr5 43247410 43247555 -156382595 + L2 LINE L2 2907 3061 -252 381 235 181 72 chr5 43248431 43248652 -156381498 - MIR SINE MIR -10 252 8 448 258 182 0 chr5 43248652 43248784 -156381366 + MER5A DNA MER1_type 33 188 -1 2323 88 0 3 chr5 43249064 43249360 -156380790 + AluSc SINE Alu 1 295 -14 1961 138 13 3 chr5 43250194 43250498 -156379652 + AluJb SINE Alu 1 307 -5 367 313 0 0 chr5 43250608 43250707 -156379443 - L2 LINE L2 -8 3305 3207 298 245 90 75 chr5 43250744 43250932 -156379218 + L2 LINE L2 3123 3313 0 27 29 0 0 chr5 43251067 43251101 -156379049 + AT_rich Low_complexity Low_complexity 1 34 0 385 219 8 62 chr5 43251429 43251557 -156378593 + MER103 DNA DNA 2 122 -44 182 279 87 48 chr5 43251778 43251882 -156378268 - L2 LINE L2 -3 3269 3162 282 243 68 0 chr5 43252000 43252074 -156378076 - MIR SINE MIR -110 98 20 248 297 42 59 chr5 43252434 43252552 -156377598 - MIR3 SINE MIR -11 197 82 510 275 14 0 chr5 43252657 43252799 -156377351 - MIR SINE MIR -111 151 8 408 321 11 60 chr5 43252923 43253188 -156376962 - MARNA DNA Mariner -8 578 327 5076 139 25 5 chr5 43253788 43254621 -156375529 + L1PA16 LINE L1 5317 6166 0 23 33 0 0 chr5 43255163 43255193 -156374957 + AT_rich Low_complexity Low_complexity 1 30 0 195 256 215 6 chr5 43256252 43256354 -156373796 - MER5B DNA MER1_type -68 121 1 564 241 84 12 chr5 43256371 43256537 -156373613 - MER5B DNA MER1_type 0 178 1 1026 226 110 28 chr5 43257801 43258120 -156372030 - MER2 DNA MER2_type 0 345 1 232 200 0 0 chr5 43258307 43258352 -156371798 - L2 LINE L2 0 3313 3269 425 341 90 14 chr5 43259084 43259295 -156370855 + MIR SINE MIR 17 243 -19 1215 258 130 17 chr5 43259885 43260705 -156369445 - L2 LINE L2 0 3313 2411 249 316 32 42 chr5 43260970 43261065 -156369085 + MER5B DNA MER1_type 64 157 -21 399 320 28 6 chr5 43261316 43261494 -156368656 + MER117 DNA MER1_type 14 195 -2 214 178 0 22 chr5 43262945 43262990 -156367160 + (CATA)n Simple_repeat Simple_repeat 3 46 0 441 0 0 0 chr5 43262990 43263039 -156367111 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 369 58 0 0 chr5 43263842 43263894 -156366256 + (TA)n Simple_repeat Simple_repeat 2 53 0 943 260 71 57 chr5 43264967 43265639 -156364511 - L1ME1 LINE L1 -217 5949 5240 204 97 0 0 chr5 43265639 43265670 -156364480 + (TG)n Simple_repeat Simple_repeat 2 32 0 25 90 0 0 chr5 43265672 43265739 -156364411 + AT_rich Low_complexity Low_complexity 1 67 0 2542 26 7 13 chr5 43266493 43266800 -156363350 - AluY SINE Alu -6 305 1 413 123 0 31 chr5 43267716 43267781 -156362369 + AluS SINE Alu 224 286 -23 36 0 0 0 chr5 43267781 43267817 -156362333 + AT_rich Low_complexity Low_complexity 1 36 0 484 275 66 109 chr5 43268189 43268400 -156361750 - MIR SINE MIR -39 223 22 217 191 27 64 chr5 43268447 43268557 -156361593 + A-rich Low_complexity Low_complexity 3 108 0 720 138 0 166 chr5 43271127 43271344 -156358806 + MER96B DNA MER1_type? 1 181 -236 22 0 0 0 chr5 43272206 43272228 -156357922 + AT_rich Low_complexity Low_complexity 1 22 0 188 278 74 0 chr5 43272913 43272967 -156357183 + L2 LINE L2 3214 3271 -1 189 0 0 0 chr5 43273035 43273056 -156357094 + (T)n Simple_repeat Simple_repeat 1 21 0 459 301 63 0 chr5 43273299 43273442 -156356708 - MIR SINE MIR -1 261 110 400 230 0 0 chr5 43273631 43273705 -156356445 + L1ME LINE L1 11 84 -6775 28 0 0 0 chr5 43273739 43273767 -156356383 + AT_rich Low_complexity Low_complexity 1 28 0 221 134 62 27 chr5 43273772 43273884 -156356266 + (TATAA)n Simple_repeat Simple_repeat 5 120 0 363 110 68 49 chr5 43273896 43274059 -156356091 + (TATAA)n Simple_repeat Simple_repeat 4 169 0 213 125 14 42 chr5 43274105 43274177 -156355973 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 21 0 0 0 chr5 43274177 43274198 -156355952 + AT_rich Low_complexity Low_complexity 1 21 0 219 125 78 0 chr5 43274199 43274263 -156355887 + (TA)n Simple_repeat Simple_repeat 1 69 0 277 107 36 24 chr5 43274304 43274388 -156355762 + (TTATA)n Simple_repeat Simple_repeat 5 89 0 4153 229 25 37 chr5 43274395 43275362 -156354788 + L1ME LINE L1 96 1050 -5809 * 7961 230 51 22 chr5 43275352 43277821 -156352329 + L1ME LINE L1 3477 6016 -941 390 325 36 0 chr5 43277964 43278158 -156351992 + L1ME LINE L1 6373 6573 -359 22 35 0 0 chr5 43278798 43278827 -156351323 + AT_rich Low_complexity Low_complexity 1 29 0 941 217 5 0 chr5 43279701 43279885 -156350265 - MER5A DNA MER1_type -3 186 2 2032 126 3 3 chr5 43281150 43281485 -156348665 + AluSq SINE Alu 1 313 0 520 230 96 86 chr5 43281510 43281611 -156348539 + MIR SINE MIR 52 151 -111 2350 98 3 0 chr5 43281611 43281916 -156348234 - AluSx SINE Alu -6 306 1 520 230 96 86 chr5 43281916 43282023 -156348127 + MIR SINE MIR 151 262 0 472 308 25 0 chr5 43282046 43282166 -156347984 + L2 LINE L2 3150 3272 0 878 194 46 21 chr5 43282308 43282545 -156347605 + LTR23 LTR ERV1 161 403 -34 402 300 15 8 chr5 43283002 43283132 -156347018 + MIR SINE MIR 31 161 -101 1744 184 3 10 chr5 43284267 43284577 -156345573 + AluJo SINE Alu 1 308 -4 1142 65 5 32 chr5 43284631 43284651 -156345499 + (TTTC)n Simple_repeat Simple_repeat 1 199 0 1142 65 5 32 chr5 43284651 43284836 -156345314 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1849 173 0 19 chr5 43284898 43285211 -156344939 - AluJb SINE Alu -1 311 5 288 340 100 0 chr5 43285255 43285355 -156344795 + L2 LINE L2 3163 3272 0 1085 288 32 37 chr5 43285406 43285781 -156344369 + LTR16B LTR ERVL 2 374 -90 23 0 0 0 chr5 43287031 43287054 -156343096 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr5 43287184 43287216 -156342934 + (TG)n Simple_repeat Simple_repeat 2 33 0 233 286 29 43 chr5 43287794 43287864 -156342286 + MER5A DNA MER1_type 51 119 -70 212 321 25 12 chr5 43288348 43288429 -156341721 + MIR3 SINE MIR 121 202 -6 2099 197 17 38 chr5 43289293 43289770 -156340380 - MLT1C LTR MaLR 0 467 1 1845 126 51 27 chr5 43289783 43290076 -156340074 - AluJb SINE Alu -12 300 1 188 349 36 36 chr5 43290760 43290843 -156339307 - L2 LINE L2 -2 3270 3188 188 307 34 91 chr5 43292401 43292489 -156337661 - L2 LINE L2 -89 3183 3101 237 338 150 8 chr5 43292491 43292624 -156337526 + MIR3 SINE MIR 9 160 -48 412 175 0 0 chr5 43292658 43292738 -156337412 - MER113 DNA MER1_type? -50 471 392 234 244 32 16 chr5 43292890 43293013 -156337137 - MER113 DNA MER1_type? -393 128 4 305 253 48 0 chr5 43295212 43295295 -156334855 + MIR SINE MIR 106 192 -70 2652 113 0 0 chr5 43295408 43295772 -156334378 - THE1B LTR MaLR 0 364 1 1561 71 9 0 chr5 43296161 43296371 -156333779 + L1PA7 LINE L1 5943 6154 0 270 231 0 0 chr5 43296733 43296785 -156333365 + L2 LINE L2 3221 3272 0 358 270 11 0 chr5 43297801 43297890 -156332260 - MER81 DNA DNA -24 90 1 534 236 176 7 chr5 43297907 43298055 -156332095 - MER5A DNA MER1_type -13 176 4 * 707 273 123 0 chr5 43298055 43298275 -156331875 + MIR SINE MIR 15 262 0 446 253 121 18 chr5 43298723 43298889 -156331261 + MIR SINE MIR 80 262 0 185 344 57 38 chr5 43299605 43299762 -156330388 + MIR SINE MIR 99 258 -4 614 254 68 6 chr5 43300237 43300414 -156329736 - MIR SINE MIR -65 197 10 286 358 73 28 chr5 43300838 43301017 -156329133 + MIR3 SINE MIR 19 205 -3 2112 143 0 0 chr5 43301621 43301921 -156328229 - AluSx SINE Alu -12 300 1 227 311 100 65 chr5 43301969 43302368 -156327782 + L2 LINE L2 2829 3241 -72 194 293 57 52 chr5 43302485 43302628 -156327522 - MIR SINE MIR -64 144 25 210 310 60 10 chr5 43303056 43303156 -156326994 - MER5A DNA MER1_type -5 184 80 * 319 279 53 17 chr5 43303075 43303216 -156326934 + MER5A DNA MER1_type 29 178 0 225 211 0 0 chr5 43303373 43303425 -156326725 + (TATG)n Simple_repeat Simple_repeat 3 54 0 389 129 14 0 chr5 43303525 43303595 -156326555 + (TA)n Simple_repeat Simple_repeat 2 72 0 27 81 0 0 chr5 43304597 43304659 -156325491 + AT_rich Low_complexity Low_complexity 1 62 0 35 24 0 0 chr5 43304684 43304726 -156325424 + AT_rich Low_complexity Low_complexity 1 42 0 6197 93 16 0 chr5 43306150 43307237 -156322913 - L1PA13 LINE L1 -7 6156 5083 677 229 46 102 chr5 43307785 43308156 -156321994 + LTR16A1 LTR ERVL 108 457 0 575 235 71 46 chr5 43308436 43308759 -156321391 - L1ME4a LINE L1 -16 6105 5775 2064 131 0 22 chr5 43310802 43311114 -156319036 - AluSx SINE Alu -7 305 1 1783 128 109 0 chr5 43311624 43311889 -156318261 + AluSg SINE Alu 1 294 -16 2252 88 3 7 chr5 43313273 43313567 -156316583 + AluSq SINE Alu 1 293 -20 370 299 0 0 chr5 43313574 43313671 -156316479 + L1MC4 LINE L1 6614 6710 -1332 318 241 141 55 chr5 43314198 43314488 -156315662 + Charlie4a DNA MER1_type 193 507 -1 432 263 42 0 chr5 43315979 43316074 -156314076 + L2 LINE L2 3168 3266 -6 458 342 107 16 chr5 43316261 43316571 -156313579 + L3 LINE CR1 699 1036 -541 704 302 112 65 chr5 43316660 43317378 -156312772 - L2 LINE L2 -15 3298 2311 803 149 0 0 chr5 43318054 43318195 -156311955 + L1MA5 LINE L1 6159 6299 -1 2168 121 0 7 chr5 43318670 43318968 -156311182 - AluSg SINE Alu -14 296 1 405 304 32 19 chr5 43320741 43320899 -156309251 - MIR SINE MIR -15 247 88 2101 114 27 23 chr5 43321634 43321933 -156308217 + AluSg SINE Alu 1 300 -10 309 275 288 0 chr5 43322266 43322426 -156307724 - MIR SINE MIR -46 216 11 381 285 73 67 chr5 43322807 43322986 -156307164 - MIR SINE MIR -57 205 26 678 313 83 44 chr5 43323157 43323643 -156306507 - L2 LINE L2 -845 2469 1956 1641 164 38 3 chr5 43323643 43323930 -156306220 + AluJo SINE Alu 1 297 -15 678 313 83 44 chr5 43323930 43324008 -156306142 - L2 LINE L2 -1358 1956 1883 1088 314 30 10 chr5 43324197 43324601 -156305549 - L2 LINE L2 -390 2924 2513 399 300 111 0 chr5 43324693 43324873 -156305277 - L2 LINE L2 -1577 1737 1538 1350 87 0 0 chr5 43325020 43325192 -156304958 - AluSq SINE Alu -6 307 136 1224 158 48 5 chr5 43325190 43325399 -156304751 - AluJb SINE Alu -94 218 1 * 198 294 39 39 chr5 43325414 43325516 -156304634 + L2 LINE L2 1966 2067 -1247 324 70 0 0 chr5 43325549 43325592 -156304558 + (TA)n Simple_repeat Simple_repeat 1 43 0 225 0 0 0 chr5 43325591 43325616 -156304534 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 1068 92 0 0 chr5 43325649 43325780 -156304370 - AluSq SINE Alu -182 131 1 1483 62 0 0 chr5 43326122 43326301 -156303849 - AluY SINE Alu -3 308 130 405 330 58 6 chr5 43326532 43326705 -156303445 + L3 LINE CR1 1281 1462 -115 335 313 126 42 chr5 43326726 43326940 -156303210 - MIR SINE MIR -30 232 1 315 333 121 34 chr5 43328316 43328811 -156301339 + L2 LINE L2 1932 2469 -845 2200 123 7 0 chr5 43331394 43331694 -156298456 + AluSx SINE Alu 1 302 -10 533 266 79 86 chr5 43334895 43335199 -156294951 + MLT1I LTR MaLR 82 383 -26 1042 279 77 25 chr5 43335622 43335987 -156294163 - LTR16B LTR ERVL -45 419 36 640 257 7 7 chr5 43335997 43336145 -156294005 - MIR SINE MIR -59 203 56 2295 110 0 0 chr5 43336663 43336955 -156293195 + AluSc SINE Alu 1 292 -17 351 0 0 0 chr5 43337074 43337113 -156293037 + (CA)n Simple_repeat Simple_repeat 1 39 0 523 289 34 0 chr5 43337128 43337277 -156292873 + LTR16B LTR ERVL 153 306 -158 5262 22 3 0 chr5 43337804 43338497 -156291653 - L1P2 LINE L1 -723 5432 4739 4107 44 0 0 chr5 43338497 43338996 -156291154 + L1PA4 LINE L1 5653 6152 -3 2081 124 0 7 chr5 43340156 43340455 -156289695 - AluSx SINE Alu -15 297 1 544 166 40 73 chr5 43341013 43341164 -156288986 + FRAM SINE Alu 1 146 -30 1860 117 21 7 chr5 43341682 43341964 -156288186 - AluSx SINE Alu -16 296 11 190 173 19 77 chr5 43342956 43343008 -156287142 + L2 LINE L2 3214 3262 -10 404 294 190 5 chr5 43343284 43343468 -156286682 + MIR SINE MIR 1 218 -44 35 54 0 0 chr5 43343472 43343528 -156286622 + AT_rich Low_complexity Low_complexity 1 56 0 303 291 189 8 chr5 43343573 43343700 -156286450 + MIR SINE MIR 2 151 -111 239 178 219 0 chr5 43343746 43343819 -156286331 - LTR33 LTR ERVL -9 512 424 308 263 17 42 chr5 43343954 43344072 -156286078 - LTR33 LTR ERVL -405 116 2 224 200 73 0 chr5 43344073 43344128 -156286022 + MIR SINE MIR 204 262 0 2089 271 52 54 chr5 43344488 43345636 -156284514 + L2 LINE L2 2109 3266 -47 251 299 37 0 chr5 43346314 43346421 -156283729 + MER103 DNA DNA 3 113 -53 246 221 13 65 chr5 43346526 43346603 -156283547 - MIR SINE MIR -73 189 117 1331 208 44 28 chr5 43346722 43347109 -156283041 - MLT1C LTR MaLR -12 378 9 421 328 89 32 chr5 43347644 43347749 -156282401 + MIR SINE MIR 2 100 -162 1976 128 7 0 chr5 43347749 43348031 -156282119 + AluSq SINE Alu 29 312 -1 421 328 89 32 chr5 43348031 43348172 -156281978 + MIR SINE MIR 100 262 0 377 200 0 48 chr5 43348981 43349106 -156281044 + MER113 DNA MER1_type? 65 183 -338 396 273 147 0 chr5 43349381 43349531 -156280619 + MLT1I LTR MaLR 232 403 -6 392 269 55 28 chr5 43349936 43350081 -156280069 - MIR SINE MIR -2 260 112 2256 93 22 29 chr5 43350110 43350422 -156279728 + AluSg SINE Alu 1 310 0 429 347 20 0 chr5 43351365 43351515 -156278635 + MER91A DNA MER1_type 1 153 -43 180 0 0 0 chr5 43351533 43351553 -156278597 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 1504 80 5 0 chr5 43351586 43351785 -156278365 - L1PA8 LINE L1 0 6172 5973 385 85 0 0 chr5 43351786 43351845 -156278305 + L1PA8 LINE L1 5894 5952 -220 523 300 21 52 chr5 43352187 43352514 -156277636 + MLT1K LTR MaLR 247 563 -25 480 213 0 0 chr5 43352762 43352884 -156277266 + (TA)n Simple_repeat Simple_repeat 2 123 0 301 306 85 76 chr5 43353393 43353642 -156276508 + L2 LINE L2 2732 2980 -292 185 35 69 0 chr5 43353773 43353802 -156276348 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 715 270 119 4 chr5 43353887 43354113 -156276037 + MIR SINE MIR 11 262 0 207 114 0 0 chr5 43355379 43355414 -156274736 + (TC)n Simple_repeat Simple_repeat 2 36 0 310 321 73 34 chr5 43358189 43358666 -156271484 + HAL1 LINE L1 1224 1719 -788 2006 220 51 64 chr5 43358987 43359562 -156270588 + L1ME1 LINE L1 1159 1740 -4800 1844 74 0 4 chr5 43359562 43359793 -156270357 + AluY SINE Alu 1 230 -81 2006 220 51 64 chr5 43359793 43359809 -156270341 + L1ME1 LINE L1 1740 1755 -4785 243 61 0 0 chr5 43359809 43359842 -156270308 + (CA)n Simple_repeat Simple_repeat 2 34 0 2006 220 51 64 chr5 43359842 43360030 -156270120 + L1ME1 LINE L1 1755 1929 -4611 * 4194 254 108 22 chr5 43360017 43360441 -156269709 + L1ME1 LINE L1 3533 3919 -2621 2621 52 0 3 chr5 43360441 43360751 -156269399 - AluY SINE Alu -2 309 1 4194 254 108 22 chr5 43360751 43361537 -156268613 + L1ME1 LINE L1 3919 4635 -1905 2499 55 3 3 chr5 43361537 43361845 -156268305 + AluY SINE Alu 1 308 -3 4194 254 108 22 chr5 43361845 43362717 -156267433 + L1ME1 LINE L1 4635 5797 -743 1736 225 116 58 chr5 43362723 43363393 -156266757 + L1ME1 LINE L1 5849 6557 -3 576 287 130 4 chr5 43363514 43363744 -156266406 - MIR SINE MIR -2 260 2 243 103 0 0 chr5 43364351 43364390 -156265760 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 520 148 19 0 chr5 43364527 43364635 -156265515 - L1MB1 LINE L1 0 6168 6059 2257 96 0 3 chr5 43365487 43365779 -156264371 - AluSc SINE Alu -18 291 1 1977 114 0 0 chr5 43367115 43367387 -156262763 - AluSg SINE Alu -3 307 36 654 271 83 29 chr5 43367465 43367815 -156262335 + MLT1L LTR MaLR 3 371 -244 369 239 161 15 chr5 43367859 43367989 -156262161 + MLT1L LTR MaLR 463 611 -4 545 30 0 0 chr5 43368767 43368834 -156261316 - L1PA5 LINE L1 -6 6148 6082 454 284 47 42 chr5 43370617 43370846 -156259304 + MIR SINE MIR 19 247 -15 453 61 0 184 chr5 43371037 43371135 -156259015 - MADE1 DNA Mariner 0 80 1 3300 180 23 73 chr5 43371323 43372149 -156258001 + LTR1 LTR ERV1 1 785 0 360 299 31 8 chr5 43372178 43372305 -156257845 - MIR SINE MIR 0 262 133 359 265 106 44 chr5 43373856 43374114 -156256036 - MER110A LTR ERV1 0 468 229 425 310 55 7 chr5 43375233 43375378 -156254772 + MIR SINE MIR 83 234 -28 25 75 0 0 chr5 43375396 43375449 -156254701 + AT_rich Low_complexity Low_complexity 1 53 0 24 77 0 0 chr5 43377069 43377121 -156253029 + AT_rich Low_complexity Low_complexity 1 52 0 586 283 35 0 chr5 43377174 43377347 -156252803 + MIR SINE MIR 54 232 -30 251 149 43 0 chr5 43377357 43377404 -156252746 - MIR SINE MIR -31 231 183 30 0 0 0 chr5 43377404 43377434 -156252716 + AT_rich Low_complexity Low_complexity 1 30 0 2080 112 0 0 chr5 43377453 43377730 -156252420 - AluSq SINE Alu 0 313 37 495 0 0 0 chr5 43377777 43377832 -156252318 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 248 0 31 0 chr5 43377836 43377868 -156252282 + (GA)n Simple_repeat Simple_repeat 2 34 0 7782 157 22 20 chr5 43378425 43384685 -156245465 - L1PA10 LINE L1 0 6483 4 457 310 182 5 chr5 43384897 43385100 -156245050 - MIR SINE MIR -9 253 15 519 281 39 39 chr5 43385433 43385611 -156244539 + MER5A DNA MER1_type 12 189 0 363 287 93 20 chr5 43385626 43385776 -156244374 + MER5B DNA MER1_type 8 168 -10 334 290 95 9 chr5 43386042 43386273 -156243877 - L1ME4a LINE L1 -96 6025 5775 2086 98 0 64 chr5 43386456 43386632 -156243518 - AluSg1 SINE Alu -2 307 160 2309 71 3 0 chr5 43386632 43386928 -156243222 - AluY SINE Alu -14 297 1 2086 98 0 64 chr5 43386928 43387079 -156243071 - AluSg1 SINE Alu -149 160 1 2102 126 3 7 chr5 43387374 43387667 -156242483 - AluSx SINE Alu -15 297 6 418 292 59 42 chr5 43387704 43387940 -156242210 - L1ME4a LINE L1 -869 5277 5038 221 246 0 0 chr5 43388183 43388240 -156241910 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 1789 174 112 45 chr5 43388257 43388729 -156241421 - MLT1D LTR MaLR -1 504 1 40 0 0 0 chr5 43388804 43388844 -156241306 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr5 43389600 43389622 -156240528 + AT_rich Low_complexity Low_complexity 1 22 0 2430 186 12 47 chr5 43389756 43390381 -156239769 - L1MC1 LINE L1 0 6333 5776 1481 194 150 9 chr5 43390381 43390727 -156239423 - MSTD LTR MaLR -1 395 1 2430 186 12 47 chr5 43390727 43391310 -156238840 - L1MC1 LINE L1 -557 5776 5175 344 277 94 35 chr5 43392409 43392611 -156237539 + ERVL LTR ERVL 1926 2139 -3625 2127 98 18 0 chr5 43392883 43393169 -156236981 + AluSp SINE Alu 13 303 -10 399 252 84 7 chr5 43393186 43393329 -156236821 - MIR SINE MIR -56 206 53 186 263 85 51 chr5 43393392 43393417 -156236733 - L2 LINE L2 -1879 1435 1412 189 0 0 0 chr5 43393417 43393438 -156236712 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 186 263 85 51 chr5 43393438 43393530 -156236620 - L2 LINE L2 -1902 1412 1314 490 306 28 22 chr5 43393550 43393667 -156236483 + MER5A DNA MER1_type 9 129 -60 2169 68 26 0 chr5 43393667 43393933 -156236217 - AluY SINE Alu -14 297 25 490 306 28 22 chr5 43393933 43393995 -156236155 + MER5A DNA MER1_type 129 189 0 410 307 59 12 chr5 43394151 43394481 -156235669 + MLT1L LTR MaLR 202 607 -8 180 357 152 34 chr5 43394670 43394998 -156235152 - L2 LINE L2 -2281 1033 667 307 324 81 49 chr5 43395059 43395244 -156234906 - L2 LINE L2 -216 3056 2866 2237 56 0 28 chr5 43395376 43395660 -156234490 - AluY SINE Alu 0 311 36 694 127 43 0 chr5 43395704 43395916 -156234234 + CT-rich Low_complexity Low_complexity 1 221 0 811 168 6 6 chr5 43396099 43396176 -156233974 + CT-rich Low_complexity Low_complexity 3 79 -96 2022 127 10 7 chr5 43396176 43396483 -156233667 - AluSx SINE Alu -4 308 1 811 168 6 6 chr5 43396483 43396531 -156233619 + CT-rich Low_complexity Low_complexity 79 126 -49 2251 88 3 16 chr5 43396531 43396836 -156233314 - AluY SINE Alu -6 305 5 811 168 6 6 chr5 43396836 43396882 -156233268 + CT-rich Low_complexity Low_complexity 125 175 0 304 146 0 0 chr5 43396882 43396930 -156233220 + (TTTC)n Simple_repeat Simple_repeat 4 51 0 400 208 13 0 chr5 43397489 43397566 -156232584 + MER67A LTR ERV1 11 88 -455 819 233 112 75 chr5 43397686 43398066 -156232084 + MER67B LTR ERV1 83 350 -335 2369 107 0 0 chr5 43398066 43398375 -156231775 + AluSg1 SINE Alu 1 309 0 819 233 112 75 chr5 43398375 43398431 -156231719 + MER67B LTR ERV1 350 403 -282 * 915 244 19 26 chr5 43398400 43398671 -156231479 + MER67A LTR ERV1 275 543 0 2268 92 0 7 chr5 43401008 43401312 -156228838 - AluSx SINE Alu -10 302 1 244 206 95 0 chr5 43401325 43401388 -156228762 + MIR3 SINE MIR 137 205 -3 2051 130 7 3 chr5 43401787 43402086 -156228064 - AluSq SINE Alu -13 300 1 315 293 14 71 chr5 43402365 43402662 -156227488 - MER97c DNA MER1_type? -42 1048 769 24 0 0 0 chr5 43402812 43402836 -156227314 + AT_rich Low_complexity Low_complexity 1 24 0 2073 113 7 3 chr5 43402848 43403140 -156227010 + AluSg SINE Alu 12 304 -6 790 153 39 74 chr5 43403188 43403378 -156226772 - L1MC3 LINE L1 -11 7774 7592 2263 81 3 13 chr5 43403378 43403688 -156226462 - AluY SINE Alu -4 307 1 790 153 39 74 chr5 43403688 43403726 -156226424 - L1MC3 LINE L1 -193 7592 7554 286 150 9 168 chr5 43403868 43403981 -156226169 + MER97c DNA MER1_type? 454 548 -542 929 211 76 40 chr5 43403981 43404284 -156225866 - MER97b DNA MER1_type? -657 396 83 2061 109 29 0 chr5 43404294 43404607 -156225543 - L1PB2 LINE L1 -2 6149 5828 1155 188 0 0 chr5 43404680 43404887 -156225263 + MER52A LTR ERV1 1278 1484 -271 2532 104 60 52 chr5 43404890 43404968 -156225182 - L1PB2 LINE L1 -312 5839 5763 2158 108 3 43 chr5 43404968 43405292 -156224858 - AluSx SINE Alu -1 311 1 2532 104 60 52 chr5 43405292 43405693 -156224457 - L1PB2 LINE L1 -388 5763 5356 5912 181 156 55 chr5 43406090 43407679 -156222471 - MER52A LTR ERV1 0 1755 7 2084 150 7 3 chr5 43408694 43409001 -156221149 - AluSx SINE Alu -2 310 3 268 298 36 0 chr5 43409284 43409368 -156220782 - MIR SINE MIR -112 150 64 955 292 121 15 chr5 43409573 43410075 -156220075 + MLT1G1 LTR MaLR 24 582 -13 405 287 15 55 chr5 43410988 43411105 -156219045 - LTR16C LTR ERVL -18 473 366 2159 135 30 28 chr5 43411105 43411467 -156218683 - THE1B LTR MaLR -1 363 1 405 287 15 55 chr5 43411467 43411551 -156218599 - LTR16C LTR ERVL -125 366 280 26 0 0 0 chr5 43412033 43412059 -156218091 + AT_rich Low_complexity Low_complexity 1 26 0 2470 54 0 17 chr5 43412130 43412427 -156217723 + AluY SINE Alu 3 294 -17 705 265 85 13 chr5 43412674 43412980 -156217170 - MER45B DNA AcHobo 0 1040 713 512 285 4 32 chr5 43413050 43413288 -156216862 - MER45C DNA AcHobo -178 775 495 315 65 0 0 chr5 43413307 43413353 -156216797 - MADE1 DNA Mariner 0 80 35 681 343 120 9 chr5 43413666 43414098 -156216052 + L3 LINE CR1 1008 1487 -90 1620 216 120 2 chr5 43414244 43414660 -156215490 - MLT1C LTR MaLR 0 467 3 236 370 10 0 chr5 43414687 43414787 -156215363 + MIR SINE MIR 47 147 -61 210 37 0 0 chr5 43415120 43415147 -156215003 + (CA)n Simple_repeat Simple_repeat 2 28 0 2557 206 29 32 chr5 43415470 43415890 -156214260 + L1MB8 LINE L1 4666 5086 -1098 240 35 0 0 chr5 43415890 43415919 -156214231 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 2557 206 29 32 chr5 43415919 43415931 -156214219 + L1MB8 LINE L1 5086 5097 -1087 2356 158 36 32 chr5 43415931 43416436 -156213714 - L1MA7 LINE L1 -3 6288 5782 2557 206 29 32 chr5 43416436 43416913 -156213237 + L1MB8 LINE L1 5097 5569 -615 2382 90 0 3 chr5 43416913 43417213 -156212937 + AluSc SINE Alu 1 299 -10 2557 206 29 32 chr5 43417213 43417473 -156212677 + L1MB8 LINE L1 5569 5828 -356 899 199 0 6 chr5 43417475 43417636 -156212514 - MER8 DNA MER2_type -1 238 79 1795 183 0 19 chr5 43417674 43418040 -156212110 + L1MB8 LINE L1 5818 6176 -2 208 350 72 0 chr5 43418106 43418203 -156211947 - L2 LINE L2 -236 3036 2933 480 207 95 99 chr5 43418230 43418452 -156211698 + MLT1E1 LTR MaLR 1 221 -433 244 284 0 0 chr5 43419280 43419361 -156210789 + T-rich Low_complexity Low_complexity 1 81 0 3298 179 82 10 chr5 43419372 43420055 -156210095 - MER44D DNA MER2_type 0 605 2 1610 164 124 13 chr5 43420551 43420972 -156209178 + MLT2B2 LTR ERVL 1 515 0 30 0 0 0 chr5 43421059 43421089 -156209061 + AT_rich Low_complexity Low_complexity 1 30 0 321 276 52 30 chr5 43422868 43423002 -156207148 + MIR SINE MIR 33 169 -93 213 333 46 35 chr5 43422991 43423078 -156207072 + L2 LINE L2 3146 3233 -39 * 26 64 0 0 chr5 43423138 43423185 -156206965 + AT_rich Low_complexity Low_complexity 1 47 0 1305 118 35 0 chr5 43423289 43423492 -156206658 + MER2 DNA MER2_type 1 210 -135 200 259 19 37 chr5 43424635 43424689 -156205461 + L3 LINE CR1 1514 1566 -11 1055 252 5 0 chr5 43424694 43424916 -156205234 - MER58A DNA MER1_type -1 223 1 25 0 0 0 chr5 43425092 43425117 -156205033 + AT_rich Low_complexity Low_complexity 1 25 0 1127 303 24 0 chr5 43425336 43425709 -156204441 + MLT1J LTR MaLR 1 382 -129 228 275 125 25 chr5 43426400 43426480 -156203670 - L2 LINE L2 -1 3271 3184 257 324 0 0 chr5 43426597 43426665 -156203485 + MER110-int LTR ERV1 3810 3877 -2924 747 322 31 44 chr5 43426753 43427337 -156202813 + MER110-int LTR ERV1 2102 2692 -4845 434 34 34 0 chr5 43427337 43427396 -156202754 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 747 322 31 44 chr5 43427396 43428143 -156202007 + MER110-int LTR ERV1 2692 6137 -1400 1824 129 0 66 chr5 43428228 43428565 -156201585 + AluSq SINE Alu 1 317 0 3148 149 19 0 chr5 43429163 43429693 -156200457 - L1PA16 LINE L1 0 6166 5627 1170 148 10 1 chr5 43429693 43429934 -156200216 + L1 LINE L1 5177 5420 -743 1471 165 22 41 chr5 43430032 43430347 -156199803 + MER39 LTR ERV1 395 703 -4 353 247 0 10 chr5 43430372 43430469 -156199681 + MER57A LTR ERV1 302 397 -6 203 371 57 44 chr5 43430557 43430805 -156199345 + L2 LINE L2 2804 3054 -218 1617 154 65 31 chr5 43431653 43432004 -156198146 + THE1C LTR MaLR 1 363 -12 470 349 89 7 chr5 43432059 43432328 -156197822 - L2 LINE L2 -362 2952 2662 255 214 51 20 chr5 43432469 43432567 -156197583 + (TAAAG)n Simple_repeat Simple_repeat 3 103 0 528 301 89 37 chr5 43433351 43433597 -156196553 - MIR SINE MIR -1 261 3 2066 130 3 3 chr5 43434225 43434517 -156195633 - AluSg SINE Alu -18 292 1 2261 110 0 10 chr5 43434647 43434957 -156195193 - AluSx SINE Alu -5 307 1 289 378 28 7 chr5 43435109 43435252 -156194898 + MIR3 SINE MIR 32 177 -31 357 348 22 0 chr5 43435949 43436087 -156194063 - MIR SINE MIR -65 197 57 1202 176 100 25 chr5 43436947 43437186 -156192964 - AluJo SINE Alu -55 257 1 5683 81 0 116 chr5 43437589 43438523 -156191627 - LTR12 LTR ERV1 0 826 1 1613 100 0 8 chr5 43438649 43438899 -156191251 - HUERS-P3b LTR ERV1 -2458 4960 4713 746 73 0 0 chr5 43438890 43438986 -156191164 - HUERS-P3b LTR ERV1 -3544 3874 3779 * 5093 65 24 1 chr5 43438986 43439786 -156190364 + HUERS-P3 LTR ERV1 4928 5822 -1596 1271 91 5 16 chr5 43439785 43439971 -156190179 + HUERS-P3 LTR ERV1 5961 6144 -1274 * 1287 144 0 0 chr5 43439969 43440171 -156189979 + HUERS-P3 LTR ERV1 8717 8918 -1 2278 137 46 14 chr5 43440171 43440686 -156189464 + LTR9B LTR ERV1 1 560 -84 237 151 0 0 chr5 43440686 43440739 -156189411 + A-rich Low_complexity Low_complexity 1 53 0 538 317 28 0 chr5 43441903 43442045 -156188105 - L2 LINE L2 0 3313 3168 22 56 0 0 chr5 43443218 43443254 -156186896 + AT_rich Low_complexity Low_complexity 1 36 0 3874 191 41 31 chr5 43443477 43443971 -156186179 + L1MB2 LINE L1 4981 5468 -703 188 33 0 33 chr5 43443971 43444001 -156186149 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3874 191 41 31 chr5 43444001 43444345 -156185805 + L1MB2 LINE L1 5468 5807 -364 2199 109 0 0 chr5 43444345 43444663 -156185487 + AluSq SINE Alu 1 318 0 3874 191 41 31 chr5 43444663 43444996 -156185154 + L1MB2 LINE L1 5807 6168 -3 23 0 0 0 chr5 43445633 43445656 -156184494 + AT_rich Low_complexity Low_complexity 1 23 0 1452 198 61 61 chr5 43446117 43446577 -156183573 + MER31B LTR ERV1 1 460 -6 2431 147 57 2 chr5 43446585 43446990 -156183160 - LOR1b LTR ERV1 0 461 29 213 39 0 0 chr5 43446990 43447016 -156183134 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2431 147 57 2 chr5 43447016 43447047 -156183103 - LOR1b LTR ERV1 -432 29 1 1478 207 27 20 chr5 43447457 43447752 -156182398 - AluJo SINE Alu -9 303 7 916 244 30 0 chr5 43447775 43447976 -156182174 + MER58A DNA MER1_type 4 210 -14 1078 207 304 40 chr5 43449315 43449548 -156180602 + MER52A LTR ERV1 3 173 -1582 1752 125 33 7 chr5 43449548 43449820 -156180330 + AluSq SINE Alu 27 305 -8 1078 207 304 40 chr5 43449820 43450040 -156180110 + MER52A LTR ERV1 173 1231 -524 319 164 0 189 chr5 43450113 43450272 -156179878 + MER52A LTR ERV1 1221 1349 -406 * 440 203 30 38 chr5 43450261 43450394 -156179756 + LTR28 LTR ERV1 585 716 -304 * 1496 232 51 62 chr5 43450374 43450921 -156179229 + MER52A LTR ERV1 1213 1753 -2 217 254 17 0 chr5 43450971 43451030 -156179120 + A-rich Low_complexity Low_complexity 4 63 0 538 231 88 65 chr5 43451175 43451468 -156178682 - Charlie7 DNA MER1_type -388 2224 1925 1058 217 278 15 chr5 43451468 43451515 -156178635 - MLT2B1 LTR ERVL -2 518 485 1966 146 18 15 chr5 43451515 43451858 -156178292 + MER2 DNA MER2_type 1 344 0 1058 217 278 15 chr5 43451858 43452103 -156178047 - MLT2B1 LTR ERVL -35 485 306 2829 13 0 6 chr5 43452103 43452420 -156177730 + AluYb8 SINE Alu 1 315 -3 1058 217 278 15 chr5 43452420 43452536 -156177614 - MLT2B1 LTR ERVL -214 306 1 562 286 18 9 chr5 43452553 43452773 -156177377 - Charlie7 DNA MER1_type -706 1906 1685 335 113 0 50 chr5 43452878 43452958 -156177192 + (TA)n Simple_repeat Simple_repeat 1 76 0 438 236 81 47 chr5 43452958 43453315 -156176835 - Charlie7 DNA MER1_type -2168 444 8 204 300 0 43 chr5 43453369 43453439 -156176711 + MER5A DNA MER1_type 59 125 -64 979 256 50 20 chr5 43454113 43454410 -156175740 + MLT1J2 LTR MaLR 3 308 -142 414 248 38 0 chr5 43454927 43455060 -156175090 - L1MC4 LINE L1 -400 7642 7505 261 191 234 7 chr5 43455183 43455324 -156174826 - L1ME4a LINE L1 -153 5968 5796 2043 94 7 10 chr5 43455324 43455623 -156174527 - L1PB1 LINE L1 -1 6150 5853 346 302 102 25 chr5 43457647 43457958 -156172192 - MLT1J LTR MaLR -130 381 1 356 343 65 12 chr5 43457976 43458145 -156172005 + MIR SINE MIR 82 259 -3 1410 303 70 20 chr5 43458595 43459193 -156170957 - MLT2E LTR ERVL 0 628 1 24 53 0 0 chr5 43459270 43459308 -156170842 + AT_rich Low_complexity Low_complexity 1 38 0 612 272 72 79 chr5 43459328 43459799 -156170351 + LTR37B LTR ERV1 1 468 0 810 210 119 18 chr5 43460384 43460603 -156169547 - MLT1D LTR MaLR -264 241 1 226 198 21 19 chr5 43461128 43461191 -156168959 + MIR SINE MIR 92 144 -64 21 0 0 0 chr5 43461818 43461839 -156168311 + AT_rich Low_complexity Low_complexity 1 21 0 421 335 35 13 chr5 43462442 43462672 -156167478 + MER110 LTR ERV1 257 491 0 1969 113 88 0 chr5 43462895 43463178 -156166972 - AluSq SINE Alu -1 312 5 1922 156 3 10 chr5 43463194 43463508 -156166642 - AluJb SINE Alu 0 312 1 299 293 32 49 chr5 43463520 43463643 -156166507 - MIR SINE MIR -110 152 32 312 111 0 0 chr5 43464313 43464367 -156165783 + (GA)n Simple_repeat Simple_repeat 1 54 0 494 246 25 17 chr5 43464612 43464730 -156165420 - AluJo SINE Alu -109 203 85 2239 141 0 0 chr5 43465616 43465928 -156164222 + AluSx SINE Alu 1 312 0 31 0 0 0 chr5 43466584 43466615 -156163535 + AT_rich Low_complexity Low_complexity 1 31 0 2241 94 0 7 chr5 43467012 43467310 -156162840 + AluSq SINE Alu 1 296 -17 883 336 55 22 chr5 43468509 43468911 -156161239 + L2 LINE L2 133 547 -2767 1784 179 24 15 chr5 43469336 43469676 -156160474 - MER2 DNA MER2_type 0 344 2 634 228 0 37 chr5 43470112 43470248 -156159902 - FLAM_A SINE Alu 0 133 3 1185 193 22 58 chr5 43470509 43470820 -156159330 + L1MB2 LINE L1 4070 4369 -1777 3057 196 34 17 chr5 43470820 43471531 -156158619 + L1MB2 LINE L1 5447 6169 -2 2200 90 3 10 chr5 43471596 43471895 -156158255 + AluY SINE Alu 2 298 -13 39641 56 10 1 chr5 43472063 43478155 -156151995 - L1PA5 LINE L1 -5 6149 1 393 183 0 0 chr5 43478414 43478496 -156151654 - L1MC2 LINE L1 -132 6212 6131 * 477 214 29 29 chr5 43478495 43478635 -156151515 + L1MC2 LINE L1 6197 6336 -8 2499 70 0 0 chr5 43480365 43480665 -156149485 - AluY SINE Alu -11 300 1 198 368 0 0 chr5 43480864 43480921 -156149229 - L2 LINE L2 -33 3239 3183 553 291 109 18 chr5 43481081 43481356 -156148794 - LTR16A LTR ERVL -148 302 3 256 276 70 96 chr5 43481972 43482273 -156147877 - HERV16 LTR ERVL -548 4448 4156 310 350 29 29 chr5 43482563 43482872 -156147278 - HERV16 LTR ERVL -1509 4145 3837 385 327 13 0 chr5 43482888 43483044 -156147106 - HERV16 LTR ERVL -2727 2269 2112 30 59 0 0 chr5 43485919 43485970 -156144180 + AT_rich Low_complexity Low_complexity 1 51 0 253 357 80 0 chr5 43487289 43487401 -156142749 - MIR SINE MIR -67 141 21 651 267 104 59 chr5 43488237 43488574 -156141576 - L2 LINE L2 -12 3301 2950 468 307 97 64 chr5 43488607 43489092 -156141058 - L2 LINE L2 -443 2871 2371 583 338 84 10 chr5 43489098 43489394 -156140756 - L2 LINE L2 -8 3305 2988 1673 302 90 51 chr5 43489444 43489658 -156140492 - L2 LINE L2 -1022 2292 2088 2352 110 0 0 chr5 43489658 43489966 -156140184 + AluSc SINE Alu 1 308 -1 1673 302 90 51 chr5 43489966 43490250 -156139900 - L2 LINE L2 -1226 2088 1817 288 0 0 0 chr5 43490250 43490282 -156139868 + (TG)n Simple_repeat Simple_repeat 1 32 0 1673 302 90 51 chr5 43490282 43491147 -156139003 - L2 LINE L2 -1497 1817 836 2200 141 0 0 chr5 43491459 43491771 -156138379 - AluSx SINE Alu 0 312 1 1033 218 15 10 chr5 43492657 43492863 -156137287 + AluJb SINE Alu 85 291 -21 24 32 0 0 chr5 43493222 43493253 -156136897 + AT_rich Low_complexity Low_complexity 1 31 0 2374 82 7 0 chr5 43493514 43493819 -156136331 + AluSc SINE Alu 1 307 -2 24 0 0 0 chr5 43495109 43495133 -156135017 + AT_rich Low_complexity Low_complexity 1 24 0 1136 178 49 13 chr5 43495180 43495405 -156134745 - MER46A DNA MER2_type -3 233 1 673 251 87 19 chr5 43495776 43495983 -156134167 - MIR SINE MIR -5 257 37 4484 122 55 87 chr5 43498256 43498456 -156131694 - L1MA9 LINE L1 -6 6306 6101 310 102 41 0 chr5 43498456 43498505 -156131645 - MADE1 DNA Mariner -29 51 1 315 0 0 0 chr5 43498505 43498540 -156131610 + (TTA)n Simple_repeat Simple_repeat 1 35 0 4484 122 55 87 chr5 43498540 43499245 -156130905 - L1MA9 LINE L1 -209 6103 5382 2501 223 35 20 chr5 43499242 43499898 -156130252 + L1MA9 LINE L1 4738 5403 -743 * 25 31 0 0 chr5 43501014 43501046 -156129104 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 43501369 43501392 -156128758 + AT_rich Low_complexity Low_complexity 1 23 0 375 271 85 27 chr5 43501509 43501697 -156128453 - HAL1 LINE L1 -124 2383 2185 840 231 138 80 chr5 43501910 43502631 -156127519 + L1ME LINE L1 4529 5321 -843 2118 80 42 0 chr5 43502631 43502918 -156127232 - AluSc SINE Alu -5 304 6 840 231 138 80 chr5 43502918 43503130 -156127020 + L1ME LINE L1 5321 5519 -645 544 255 34 0 chr5 43503278 43503427 -156126723 - LTR33 LTR ERVL -365 156 3 26 0 0 0 chr5 43504149 43504175 -156125975 + AT_rich Low_complexity Low_complexity 1 26 0 7102 113 14 44 chr5 43504227 43505386 -156124764 - Tigger1 DNA MER2_type -4 2414 1291 7332 158 24 18 chr5 43508403 43509705 -156120445 - Tigger1 DNA MER2_type -1109 1309 1 283 301 38 49 chr5 43509747 43509930 -156120220 - L1ME LINE L1 -420 5701 5521 288 358 114 46 chr5 43510032 43510596 -156119554 + L2 LINE L2 2496 3088 -225 702 284 143 39 chr5 43510755 43511244 -156118906 + Charlie2a DNA MER1_type 326 865 -1997 34 65 0 0 chr5 43511849 43511911 -156118239 + AT_rich Low_complexity Low_complexity 1 62 0 1472 169 117 4 chr5 43512230 43512496 -156117654 + AluSx SINE Alu 1 296 -16 227 333 99 7 chr5 43513049 43513190 -156116960 + MIR3 SINE MIR 38 191 -17 308 171 0 26 chr5 43513538 43513614 -156116536 - L1MB7 LINE L1 -2 6182 6109 951 272 99 35 chr5 43514327 43514895 -156115255 + L1M4 LINE L1 1508 2159 -4485 1395 259 128 7 chr5 43514974 43515775 -156114375 + L1M4 LINE L1 2346 3232 -3412 245 221 16 98 chr5 43515777 43515899 -156114251 + L1M4 LINE L1 5028 5139 -1505 1814 76 34 11 chr5 43516058 43516322 -156113828 - AluY SINE Alu -41 270 1 2254 92 0 3 chr5 43517822 43518125 -156112025 - AluY SINE Alu -9 302 1 2048 53 7 25 chr5 43518751 43519036 -156111114 + L1P LINE L1 4 283 -5863 14547 43 68 4 chr5 43519163 43521045 -156109105 - L1P LINE L1 -3762 2384 383 658 249 84 4 chr5 43521176 43521483 -156108667 - L1M4 LINE L1 -5143 1399 1070 436 105 186 0 chr5 43521487 43521573 -156108577 - AluSg/x SINE Alu 0 312 211 284 333 8 16 chr5 43521789 43521912 -156108238 - L1M4 LINE L1 -5668 874 753 257 0 30 0 chr5 43522176 43522209 -156107941 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 230 250 78 55 chr5 43522322 43522450 -156107700 - L1M4 LINE L1 -6304 238 108 309 133 0 0 chr5 43522453 43522498 -156107652 + MER85 DNA T2_type 95 139 0 21 0 0 0 chr5 43522621 43522642 -156107508 + AT_rich Low_complexity Low_complexity 1 21 0 2467 124 11 102 chr5 43522927 43523396 -156106754 - MSTA LTR MaLR 0 428 3 779 176 0 0 chr5 43523816 43523952 -156106198 + FLAM_C SINE Alu 8 143 0 384 262 103 0 chr5 43524152 43524259 -156105891 - MIR SINE MIR -88 174 57 21 36 0 0 chr5 43524293 43524321 -156105829 + AT_rich Low_complexity Low_complexity 1 28 0 2174 115 7 0 chr5 43524333 43524629 -156105521 + AluSg SINE Alu 3 300 -10 205 106 21 43 chr5 43524668 43524715 -156105435 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 24 0 0 0 chr5 43526090 43526114 -156104036 + AT_rich Low_complexity Low_complexity 1 24 0 679 240 258 0 chr5 43526162 43526276 -156103874 - L1MD2 LINE L1 -97 6262 6179 207 0 0 0 chr5 43526276 43526299 -156103851 + (TG)n Simple_repeat Simple_repeat 2 24 0 679 240 258 0 chr5 43526299 43526455 -156103695 - L1MD2 LINE L1 -180 6179 5922 618 313 83 13 chr5 43526750 43527050 -156103100 + Charlie2 DNA MER1_type 1 321 -2461 2652 232 46 24 chr5 43527057 43527869 -156102281 + Charlie2 DNA MER1_type 1857 2695 -167 1020 201 55 109 chr5 43527869 43528253 -156101897 - MLT1A1 LTR MaLR -2 363 1 2652 232 46 24 chr5 43528253 43528391 -156101759 + Charlie2 DNA MER1_type 2695 2828 -34 28 0 0 0 chr5 43528518 43528546 -156101604 + AT_rich Low_complexity Low_complexity 1 28 0 1085 140 5 42 chr5 43528688 43528796 -156101354 - MSTB1 LTR MaLR 0 432 333 1763 139 78 36 chr5 43528796 43529156 -156100994 + THE1C LTR MaLR 1 375 0 1085 140 5 42 chr5 43529156 43529240 -156100910 - MSTB1 LTR MaLR -99 333 247 540 161 0 0 chr5 43529247 43529334 -156100816 - AluJ/FLAM SINE Alu -225 87 1 1039 204 53 41 chr5 43529334 43529579 -156100571 - MSTB1 LTR MaLR -184 248 1 29 47 0 0 chr5 43529735 43529778 -156100372 + AT_rich Low_complexity Low_complexity 1 43 0 6476 241 64 69 chr5 43529888 43530536 -156099614 + L1M4c LINE L1 11 661 -5723 1539 205 28 3 chr5 43530536 43530824 -156099326 + AluJo SINE Alu 1 295 -17 1503 196 3 29 chr5 43530824 43531136 -156099014 + AluJo SINE Alu 1 304 -8 6476 241 64 69 chr5 43531136 43532435 -156097715 + L1M4c LINE L1 660 1947 -4437 2285 137 17 3 chr5 43532435 43532794 -156097356 + THE1B LTR MaLR 1 364 0 6476 241 64 69 chr5 43532794 43533281 -156096869 + L1M4c LINE L1 1947 2435 -3949 394 278 216 6 chr5 43533443 43533605 -156096545 - MIR SINE MIR 0 262 67 21 0 0 0 chr5 43534315 43534336 -156095814 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 43534474 43534503 -156095647 + AT_rich Low_complexity Low_complexity 1 29 0 407 141 207 83 chr5 43535148 43535220 -156094930 + L1MB2 LINE L1 6033 6095 -76 2349 99 0 0 chr5 43535220 43535522 -156094628 + AluSq SINE Alu 1 302 -11 407 141 207 83 chr5 43535522 43535570 -156094580 + L1MB2 LINE L1 6095 6168 -3 416 245 0 31 chr5 43535743 43535841 -156094309 + L2 LINE L2 3202 3296 -17 23 54 0 0 chr5 43535882 43535919 -156094231 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr5 43535987 43536007 -156094143 + (T)n Simple_repeat Simple_repeat 1 20 0 2227 116 7 0 chr5 43536267 43536577 -156093573 + AluSq SINE Alu 2 313 0 525 273 104 44 chr5 43536897 43537281 -156092869 - Zaphod DNA AcHobo -10 4021 3615 372 158 75 68 chr5 43537301 43537579 -156092571 - Zaphod DNA AcHobo -3046 985 706 23 0 0 0 chr5 43538162 43538185 -156091965 + AT_rich Low_complexity Low_complexity 1 23 0 184 316 35 18 chr5 43540234 43540291 -156089859 + MIR SINE MIR 21 78 -184 423 38 0 0 chr5 43540300 43540353 -156089797 + (TG)n Simple_repeat Simple_repeat 2 54 0 216 302 179 9 chr5 43540354 43540460 -156089690 + MIR SINE MIR 129 252 -10 2231 101 3 3 chr5 43540503 43540811 -156089339 + AluSx SINE Alu 1 308 -4 314 304 9 9 chr5 43540924 43541039 -156089111 + GA-rich Low_complexity Low_complexity 2 116 0 227 170 0 19 chr5 43541363 43541416 -156088734 + (TTA)n Simple_repeat Simple_repeat 1 52 0 3513 244 57 15 chr5 43541462 43542724 -156087426 + L1MCb LINE L1 1 1317 -4849 527 250 86 0 chr5 43542812 43542952 -156087198 + FRAM SINE Alu 1 152 -14 28 0 0 0 chr5 43542955 43542983 -156087167 + AT_rich Low_complexity Low_complexity 1 28 0 1237 246 85 14 chr5 43543072 43543438 -156086712 + L1M4 LINE L1 3718 4109 -2037 243 0 0 0 chr5 43543439 43543466 -156086684 + (A)n Simple_repeat Simple_repeat 1 27 0 478 271 0 0 chr5 43543476 43543583 -156086567 - FLAM_A SINE Alu -26 116 10 284 258 0 0 chr5 43543589 43543655 -156086495 + L1M4 LINE L1 4097 4162 -1984 280 243 63 9 chr5 43543924 43544035 -156086115 - L1MC4 LINE L1 -824 7218 7102 585 263 0 0 chr5 43544117 43544235 -156085915 - MER45C DNA AcHobo -835 118 1 611 261 8 8 chr5 43545038 43545168 -156084982 + MER45A DNA AcHobo 11 140 -38 2445 73 0 6 chr5 43545218 43545531 -156084619 + AluY SINE Alu 1 311 0 1396 178 44 18 chr5 43546632 43546907 -156083243 - MLT1C LTR MaLR -183 284 3 2567 193 13 28 chr5 43547652 43548187 -156081963 - L1PA16 LINE L1 -1 6165 5639 * 4056 202 13 13 chr5 43548184 43549083 -156081067 + L1 LINE L1 4066 4964 -1182 2536 68 3 0 chr5 43549097 43549406 -156080744 - AluSp SINE Alu -3 310 1 782 231 118 25 chr5 43549406 43549832 -156080318 - Charlie2 DNA MER1_type -386 2476 2008 366 181 0 0 chr5 43549831 43549903 -156080247 + Charlie2 DNA MER1_type 1938 2009 -853 * 23 0 0 0 chr5 43550595 43550618 -156079532 + AT_rich Low_complexity Low_complexity 1 23 0 1898 126 42 3 chr5 43551061 43551347 -156078803 + AluSx SINE Alu 1 297 -15 284 288 131 50 chr5 43551363 43551411 -156078739 + MIR3 SINE MIR 4 47 -161 1641 198 33 17 chr5 43551411 43551567 -156078583 - MLT1A1 LTR MaLR 0 365 213 1832 166 31 0 chr5 43551567 43551856 -156078294 - AluSx SINE Alu -14 298 1 1641 198 33 17 chr5 43551856 43552058 -156078092 - MLT1A1 LTR MaLR -152 213 1 284 288 131 50 chr5 43552058 43552169 -156077981 + MIR3 SINE MIR 47 176 -32 270 248 40 84 chr5 43552502 43552704 -156077446 - HAL1b LINE L1 -3 1345 1153 5127 143 21 13 chr5 43552755 43553626 -156076524 - L1PA15 LINE L1 -6 6159 5282 511 283 21 11 chr5 43553733 43553924 -156076226 - HAL1b LINE L1 -630 718 526 428 358 51 32 chr5 43554097 43554410 -156075740 - HAL1b LINE L1 -927 421 103 342 357 94 9 chr5 43555830 43556054 -156074096 - L1MC4a LINE L1 -1734 6074 5832 4017 114 15 5 chr5 43556070 43556684 -156073466 - L1PA13 LINE L1 -6 6157 5538 728 94 0 0 chr5 43556684 43556780 -156073370 + L1PA12 LINE L1 6 101 -7480 248 304 120 0 chr5 43556778 43556903 -156073247 - L1MC4a LINE L1 -1985 5823 5684 * 524 257 61 37 chr5 43556920 43557044 -156073106 - L1MC4a LINE L1 -2239 5569 5436 3316 176 7 10 chr5 43557044 43557651 -156072499 - MER6A DNA MER2_type 0 605 1 524 257 61 37 chr5 43557651 43557740 -156072410 - L1MC4a LINE L1 -2372 5436 5351 557 106 0 0 chr5 43559022 43559107 -156071043 + Alu SINE Alu 225 309 0 531 351 144 3 chr5 43559107 43559497 -156070653 - L2 LINE L2 -1494 1820 1376 189 0 0 0 chr5 43559640 43559661 -156070489 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 198 0 0 0 chr5 43559660 43559682 -156070468 + (TA)n Simple_repeat Simple_repeat 1 22 0 234 0 0 0 chr5 43561161 43561187 -156068963 + (TTG)n Simple_repeat Simple_repeat 2 27 0 948 236 102 38 chr5 43561249 43561622 -156068528 - MLT2C1 LTR ERVL 0 397 1 238 314 81 16 chr5 43563021 43563145 -156067005 - MARNA DNA Mariner -81 505 374 450 313 28 28 chr5 43563539 43563753 -156066397 + MLT1I LTR MaLR 19 232 -177 2284 50 14 0 chr5 43564992 43565271 -156064879 + AluY SINE Alu 1 283 -28 373 181 42 0 chr5 43565939 43566010 -156064140 - Charlie7 DNA MER1_type -614 1998 1925 915 224 18 7 chr5 43566010 43566057 -156064093 - MLT2B2 LTR ERVL -2 513 468 1984 146 18 15 chr5 43566057 43566400 -156063750 + MER2 DNA MER2_type 1 344 0 915 224 18 7 chr5 43566400 43566632 -156063518 - MLT2B2 LTR ERVL -47 468 144 2387 46 0 0 chr5 43566645 43566928 -156063222 + AluY SINE Alu 1 283 -28 1861 205 8 13 chr5 43567699 43568090 -156062060 - MLT1B LTR MaLR 0 390 2 1746 171 129 3 chr5 43568176 43568556 -156061594 - MER63B DNA MER1_type -8 428 1 404 288 129 6 chr5 43568780 43568943 -156061207 + MIR SINE MIR 49 231 -31 1132 287 35 39 chr5 43569316 43569776 -156060374 + LTR16B LTR ERVL 3 460 -4 2335 318 55 41 chr5 43570053 43570610 -156059540 + HERV16 LTR ERVL 299 846 -4150 2126 124 0 0 chr5 43570610 43570892 -156059258 + AluSx SINE Alu 1 282 -30 2335 318 55 41 chr5 43570892 43570905 -156059245 + HERV16 LTR ERVL 846 857 -4139 195 42 0 0 chr5 43570905 43570929 -156059221 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 2335 318 55 41 chr5 43570929 43571609 -156058541 + HERV16 LTR ERVL 857 1568 -3428 342 274 57 63 chr5 43571796 43571971 -156058179 - MERVL LTR ERVL -1179 4306 4136 660 287 40 60 chr5 43572051 43572399 -156057751 - MERVL LTR ERVL -1303 3693 3353 1087 307 41 14 chr5 43572455 43572891 -156057259 - LTR16B LTR ERVL -14 450 3 301 247 86 0 chr5 43572941 43573034 -156057116 + MER103 DNA DNA 57 157 -9 28 0 0 0 chr5 43573475 43573503 -156056647 + AT_rich Low_complexity Low_complexity 1 28 0 1864 234 16 59 chr5 43574878 43575840 -156054310 - L1ME1 LINE L1 -123 6043 5017 1829 161 49 23 chr5 43575840 43576189 -156053961 + MER46B DNA MER2_type 4 236 0 1864 234 16 59 chr5 43576189 43576358 -156053792 - L1ME1 LINE L1 -1149 5017 4842 1813 230 4 32 chr5 43576388 43576849 -156053301 - L1ME LINE L1 -458 5708 5261 1742 259 58 37 chr5 43576819 43577527 -156052623 - L1ME1 LINE L1 -1309 4837 4115 * 1974 96 54 7 chr5 43577830 43578110 -156052040 + AluSg SINE Alu 1 293 -17 304 359 41 21 chr5 43578938 43579083 -156051067 + MIR SINE MIR 53 200 -62 201 323 42 21 chr5 43580980 43581076 -156049074 + L2 LINE L2 2920 3017 -255 229 262 0 0 chr5 43581753 43581814 -156048336 - Charlie7 DNA MER1_type -2136 476 416 1363 207 126 24 chr5 43581831 43582203 -156047947 + MER66A LTR ERV1 29 438 -40 232 348 36 0 chr5 43582239 43582351 -156047799 - Charlie7 DNA MER1_type -2239 373 258 1630 281 16 21 chr5 43582358 43582842 -156047308 - MLT1H1 LTR MaLR -5 550 69 1861 131 4 0 chr5 43583659 43583918 -156046232 + AluSx SINE Alu 1 260 -52 1735 162 107 23 chr5 43583933 43584279 -156045871 - THE1C LTR MaLR 0 375 1 283 345 125 12 chr5 43585810 43586155 -156043995 + L1MC/D LINE L1 5282 5665 -2143 803 189 86 0 chr5 43586233 43586408 -156043742 + L1MA4 LINE L1 6108 6297 -3 842 146 85 38 chr5 43586417 43586484 -156043666 - MER96B DNA MER1_type? -47 370 308 2153 104 3 22 chr5 43586484 43586801 -156043349 + AluY SINE Alu 1 311 0 842 146 85 38 chr5 43586801 43586945 -156043205 - MER96B DNA MER1_type? -109 308 149 256 200 0 0 chr5 43586953 43586998 -156043152 + MER96B DNA MER1_type? 373 417 0 234 0 0 0 chr5 43587533 43587559 -156042591 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 584 229 57 69 chr5 43587839 43588014 -156042136 + MER5B DNA MER1_type 1 173 -5 231 243 14 29 chr5 43588050 43588120 -156042030 + MER5A DNA MER1_type 39 107 -82 344 249 11 102 chr5 43589300 43589437 -156040713 - FLAM_A SINE Alu -29 104 1 278 336 90 27 chr5 43591087 43591343 -156038807 + L2 LINE L2 2391 2662 -652 3131 198 29 89 chr5 43591810 43592838 -156037312 - LTR5 LTR ERVK 0 969 4 1287 273 114 12 chr5 43593002 43593781 -156036369 + L2 LINE L2 2480 3312 -1 236 275 38 25 chr5 43593817 43593897 -156036253 + MIR3 SINE MIR 125 205 -3 927 237 119 58 chr5 43594100 43594569 -156035581 + LTR33 LTR ERVL 6 503 -18 1937 164 6 6 chr5 43594643 43594955 -156035195 + AluJo SINE Alu 1 312 0 2301 104 3 0 chr5 43596606 43596913 -156033237 + AluSg SINE Alu 1 308 -2 2196 122 0 0 chr5 43596971 43597274 -156032876 + AluSc SINE Alu 1 303 -6 714 143 23 8 chr5 43597323 43597456 -156032694 + L1MB3 LINE L1 6041 6175 -8 1808 164 14 0 chr5 43597817 43598109 -156032041 + AluJb SINE Alu 12 307 -5 4374 192 36 8 chr5 43598153 43599081 -156031069 + L1P4 LINE L1 4379 5332 -814 443 136 0 144 chr5 43599083 43599164 -156030986 + MER50 LTR ERV1 498 558 -176 2169 90 4 0 chr5 43599164 43599469 -156030681 - AluSx SINE Alu 0 310 5 443 136 0 144 chr5 43599469 43599511 -156030639 + MER50 LTR ERV1 558 604 -130 2124 129 26 6 chr5 43599516 43599858 -156030292 + L1P4 LINE L1 5317 5665 -500 193 303 30 0 chr5 43601942 43602008 -156028142 - MIR SINE MIR -1 261 194 815 196 0 7 chr5 43602017 43602165 -156027985 - FRAM SINE Alu -27 149 3 342 0 0 0 chr5 43602167 43602205 -156027945 + (TG)n Simple_repeat Simple_repeat 1 38 0 273 250 40 13 chr5 43602351 43602427 -156027723 - HAL1b LINE L1 -439 909 832 312 227 10 21 chr5 43602542 43602639 -156027511 - HAL1b LINE L1 -507 841 746 363 264 0 0 chr5 43602668 43602755 -156027395 - HAL1 LINE L1 -343 2164 2078 1768 182 16 65 chr5 43603538 43603922 -156026228 + MLT1A1 LTR MaLR 1 365 0 1147 200 111 51 chr5 43604058 43604373 -156025777 - MLT1D LTR MaLR 0 505 172 341 248 20 30 chr5 43604624 43604725 -156025425 - MIR SINE MIR -134 128 29 740 239 68 56 chr5 43604877 43605128 -156025022 + MIR SINE MIR 9 262 0 2170 147 48 17 chr5 43605767 43606120 -156024030 + THE1B LTR MaLR 1 364 0 3280 86 22 12 chr5 43606120 43606611 -156023539 + THE1B-int LTR MaLR 1 496 -1084 7973 165 60 17 chr5 43606764 43608240 -156021910 + MLT1A1-int LTR MaLR 113 1651 0 2788 138 23 28 chr5 43608240 43608668 -156021482 + MSTB LTR MaLR 1 426 0 392 157 48 24 chr5 43608690 43608773 -156021377 - L1M4 LINE L1 -1232 4914 4830 363 222 24 32 chr5 43608920 43609046 -156021104 + CT-rich Low_complexity Low_complexity 4 128 0 322 271 198 44 chr5 43609059 43609332 -156020818 - HAL1 LINE L1 -1312 1195 881 22 56 0 0 chr5 43609933 43609969 -156020181 + AT_rich Low_complexity Low_complexity 1 36 0 471 304 93 12 chr5 43610502 43610663 -156019487 + MER91A DNA MER1_type 1 174 -22 230 325 13 26 chr5 43610673 43610750 -156019400 + MER91A DNA MER1_type 121 196 0 1366 127 71 24 chr5 43611200 43611452 -156018698 - MSTA LTR MaLR -164 264 1 1110 165 12 22 chr5 43611452 43611661 -156018489 - L1MC/D LINE L1 -545 5626 5419 263 305 191 0 chr5 43612636 43612767 -156017383 + MIR3 SINE MIR 33 188 -20 509 281 20 7 chr5 43614255 43614408 -156015742 - MER103 DNA DNA 0 166 12 2224 127 3 0 chr5 43614492 43614800 -156015350 + AluSx SINE Alu 1 309 -3 28 0 0 0 chr5 43614926 43614954 -156015196 + AT_rich Low_complexity Low_complexity 1 28 0 386 0 0 0 chr5 43615232 43615276 -156014874 - MADE1 DNA Mariner 0 80 37 341 91 169 0 chr5 43616028 43616105 -156014045 + AluSc SINE Alu 203 292 -7 234 0 0 0 chr5 43617994 43618020 -156012130 + (T)n Simple_repeat Simple_repeat 1 26 0 316 265 24 12 chr5 43619411 43619494 -156010656 + MIR SINE MIR 28 111 -151 2208 108 7 0 chr5 43619625 43619920 -156010230 + AluSp SINE Alu 1 297 -16 1669 147 82 0 chr5 43620168 43620460 -156009690 - L1MC1 LINE L1 -30 6303 5988 187 295 180 0 chr5 43621624 43621685 -156008465 + MER5B DNA MER1_type 51 122 -56 342 298 147 23 chr5 43621834 43622052 -156008098 + MIR SINE MIR 10 254 -8 2130 119 0 3 chr5 43622060 43622355 -156007795 + AluSg1 SINE Alu 1 294 -15 697 279 60 4 chr5 43622697 43622930 -156007220 - MLT1L LTR MaLR -2 613 368 2684 38 0 13 chr5 43622986 43623301 -156006849 + AluY SINE Alu 1 311 0 477 240 40 32 chr5 43623301 43623426 -156006724 - MLT1L LTR MaLR -338 277 152 447 306 37 0 chr5 43623454 43623562 -156006588 + L2 LINE L2 3161 3272 0 1369 164 61 24 chr5 43624256 43624549 -156005601 + AluJo SINE Alu 9 312 0 302 215 153 62 chr5 43624668 43624861 -156005289 - L1ME4a LINE L1 -4 6117 5943 1740 154 27 13 chr5 43624861 43625159 -156004991 - AluJb SINE Alu -10 302 1 302 215 153 62 chr5 43625159 43625359 -156004791 - L1ME4a LINE L1 -178 5943 5652 356 203 0 0 chr5 43625563 43625632 -156004518 + AluJ/FLAM SINE Alu 1 69 -233 243 231 0 0 chr5 43625661 43625713 -156004437 + G-rich Low_complexity Low_complexity 1 52 0 830 180 111 11 chr5 43625716 43625905 -156004245 + MER50 LTR ERV1 33 240 -494 * 1930 115 7 7 chr5 43625888 43626167 -156003983 + MER50 LTR ERV1 433 711 -23 258 267 0 0 chr5 43626168 43626228 -156003922 + FLAM SINE Alu 68 127 -6 181 326 132 16 chr5 43626485 43626614 -156003536 + MIR SINE MIR 3 146 -116 272 279 196 13 chr5 43626646 43626804 -156003346 - MIR SINE MIR -54 208 22 953 166 44 57 chr5 43626952 43627181 -156002969 - MER96B DNA MER1_type? 0 417 192 41 87 0 0 chr5 43627996 43628100 -156002050 + AT_rich Low_complexity Low_complexity 1 104 0 2202 103 17 0 chr5 43628106 43628408 -156001742 + AluSq SINE Alu 1 307 -6 662 281 81 37 chr5 43628653 43628999 -156001151 - MLT1J2 LTR MaLR -36 410 19 425 315 13 34 chr5 43629022 43629260 -156000890 + L1MC4a LINE L1 5694 5926 -1882 394 238 70 75 chr5 43629260 43629487 -156000663 + L1MC4a LINE L1 5711 5936 -1872 261 206 0 48 chr5 43629930 43629993 -156000157 + MLT1J2 LTR MaLR 38 97 -353 241 263 30 61 chr5 43630209 43630308 -155999842 - L2 LINE L2 -12 3260 3165 1658 193 52 60 chr5 43630416 43630758 -155999392 - MLT2B1 LTR ERVL -139 381 41 4306 61 322 0 chr5 43630758 43631383 -155998767 + LTR12 LTR ERV1 1 826 0 1658 193 52 60 chr5 43631383 43631424 -155998726 - MLT2B1 LTR ERVL -479 41 1 628 267 107 15 chr5 43633279 43633485 -155996665 + MIR SINE MIR 23 247 -15 183 393 9 0 chr5 43633534 43633641 -155996509 - L2 LINE L2 -642 2672 2565 467 308 128 73 chr5 43634228 43634695 -155995455 + MLT1K LTR MaLR 96 588 0 676 209 310 45 chr5 43635515 43635783 -155994367 + MLT1D LTR MaLR 1 339 -166 * 2195 148 36 44 chr5 43635770 43635813 -155994337 - MLT2D LTR ERVL -6 408 366 297 0 0 0 chr5 43635813 43635846 -155994304 + (ATTG)n Simple_repeat Simple_repeat 2 34 0 2195 148 36 44 chr5 43635846 43635985 -155994165 - MLT2D LTR ERVL -48 366 227 2285 109 6 3 chr5 43635985 43636297 -155993853 + AluSp SINE Alu 1 313 0 2195 148 36 44 chr5 43636297 43636524 -155993626 - MLT2D LTR ERVL -187 227 1 673 186 161 47 chr5 43637293 43637404 -155992746 + Charlie4a DNA MER1_type 126 223 -1738 2334 89 0 7 chr5 43637404 43637706 -155992444 + AluSx SINE Alu 1 300 -12 673 186 161 47 chr5 43637706 43637873 -155992277 + Charlie4a DNA MER1_type 223 436 -72 894 164 0 0 chr5 43637878 43638012 -155992138 + AluJo SINE Alu 1 134 -178 414 149 27 14 chr5 43638012 43638086 -155992064 + Charlie4a DNA MER1_type 431 505 -3 2061 144 99 9 chr5 43638818 43639152 -155990998 - MLT1A1 LTR MaLR -1 364 1 645 252 110 8 chr5 43639939 43640157 -155989993 - MIR SINE MIR -11 251 15 2386 119 9 9 chr5 43640201 43640538 -155989612 - MER1B DNA MER1_type 0 337 1 679 217 84 110 chr5 43642252 43642531 -155987619 + L1MC4a LINE L1 5581 5866 -255 1830 158 3 10 chr5 43642531 43642822 -155987328 + AluJb SINE Alu 1 289 -23 207 0 0 0 chr5 43642824 43642847 -155987303 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 234 0 0 0 chr5 43642846 43642872 -155987278 + (TA)n Simple_repeat Simple_repeat 1 26 0 679 217 84 110 chr5 43642847 43642958 -155987192 + L1MC4a LINE L1 5867 5945 -176 231 36 0 0 chr5 43642963 43642991 -155987159 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1153 172 21 0 chr5 43642993 43643185 -155986965 - AluJo SINE Alu -30 282 87 21 36 0 0 chr5 43643185 43643213 -155986937 + AT_rich Low_complexity Low_complexity 1 28 0 451 307 40 28 chr5 43643213 43643389 -155986761 + MER5A DNA MER1_type 12 189 0 967 179 5 32 chr5 43643477 43643667 -155986483 - AluJo SINE Alu -2 310 126 2029 118 6 53 chr5 43643809 43644130 -155986020 + AluSx SINE Alu 1 306 -6 406 280 48 8 chr5 43644194 43644319 -155985831 - L2 LINE L2 -1 3312 3183 210 275 73 46 chr5 43644343 43644452 -155985698 - L2 LINE L2 -249 3064 2953 496 254 14 22 chr5 43645771 43645909 -155984241 + MER5A DNA MER1_type 52 188 -1 653 295 36 10 chr5 43646087 43646280 -155983870 - MER115 DNA AcHobo -438 255 58 2628 34 7 0 chr5 43646777 43647075 -155983075 - AluY SINE Alu -11 300 1 30 77 0 0 chr5 43647970 43648035 -155982115 + AT_rich Low_complexity Low_complexity 1 65 0 316 115 39 0 chr5 43648069 43648121 -155982029 - MER116 DNA Mariner 0 80 27 368 130 14 0 chr5 43649948 43650017 -155980133 + CT-rich Low_complexity Low_complexity 1 70 0 24 0 0 0 chr5 43651168 43651192 -155978958 + AT_rich Low_complexity Low_complexity 1 24 0 252 236 0 0 chr5 43651362 43651451 -155978699 + T-rich Low_complexity Low_complexity 1 89 0 351 279 72 72 chr5 43651522 43651884 -155978266 - L1M3c LINE L1 -4591 1550 1189 322 319 72 42 chr5 43651955 43652121 -155978029 + MIR SINE MIR 9 179 -83 241 194 65 0 chr5 43653239 43653301 -155976849 + (CAGAGA)n Simple_repeat Simple_repeat 2 67 0 250 234 78 0 chr5 43654163 43654227 -155975923 + MIR SINE MIR 36 104 -104 1712 207 30 22 chr5 43654454 43654816 -155975334 - MLT1A1 LTR MaLR 0 365 1 273 164 0 36 chr5 43655010 43655065 -155975085 - MIR3 SINE MIR -48 160 108 1885 149 7 13 chr5 43655459 43655768 -155974382 + AluJb SINE Alu 1 307 -5 1757 199 30 38 chr5 43655832 43656225 -155973925 - MLT1B LTR MaLR 0 390 1 7698 184 114 20 chr5 43656449 43658049 -155972101 + MER52A LTR ERV1 6 1755 0 2634 154 90 0 chr5 43658204 43658521 -155971629 + L1MB2 LINE L1 5450 5826 -345 180 0 0 0 chr5 43658521 43658541 -155971609 + (TA)n Simple_repeat Simple_repeat 1 20 0 2634 154 90 0 chr5 43658541 43658702 -155971448 + L1MB2 LINE L1 5826 5971 -200 1647 209 3 3 chr5 43658702 43658994 -155971156 + AluJo SINE Alu 1 292 -20 322 65 0 0 chr5 43659010 43659056 -155971094 - L1PA7 LINE L1 -4 6150 6105 293 286 0 14 chr5 43659158 43659228 -155970922 - MER5B DNA MER1_type -109 69 1 2043 113 3 7 chr5 43659431 43659738 -155970412 + AluSx SINE Alu 2 307 0 2444 121 39 17 chr5 43659808 43660164 -155969986 - THE1B LTR MaLR 0 364 1 4879 87 0 11 chr5 43660164 43660819 -155969331 - THE1B-int LTR MaLR 0 1580 933 468 215 0 9 chr5 43662276 43662383 -155967767 - AluSp/q SINE Alu 0 313 208 190 315 27 0 chr5 43663103 43663176 -155966974 + L2 LINE L2 3192 3266 -47 1719 154 39 0 chr5 43664495 43664774 -155965376 - AluJo SINE Alu 0 312 23 699 266 58 11 chr5 43664774 43665052 -155965098 + L1MC4a LINE L1 5597 5887 -1921 1905 123 28 14 chr5 43665081 43665366 -155964784 + AluSx SINE Alu 1 289 -23 329 279 37 37 chr5 43665742 43665878 -155964272 - LTR67 LTR ERVL -266 291 156 974 231 15 132 chr5 43666865 43667389 -155962761 - LTR67 LTR ERVL 0 557 95 269 230 115 30 chr5 43667621 43667786 -155962364 - L1ME4a LINE L1 -4 6117 5939 1643 168 68 0 chr5 43668177 43668457 -155961693 + AluJo SINE Alu 1 299 -13 228 219 171 8 chr5 43668468 43668591 -155961559 - L1ME4a LINE L1 -844 5302 5160 251 261 149 30 chr5 43668721 43668855 -155961295 + L2 LINE L2 2366 2515 -799 1674 117 0 0 chr5 43668958 43669180 -155960970 - AluSx SINE Alu -90 222 1 415 274 134 24 chr5 43669763 43670434 -155959716 + L1MC5 LINE L1 7098 7671 -290 715 195 76 22 chr5 43670434 43670619 -155959531 + LTR41 LTR ERVL 1 195 -578 2183 92 0 42 chr5 43671077 43671383 -155958767 - AluSg SINE Alu -17 293 1 296 24 0 24 chr5 43671415 43671457 -155958693 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 619 206 122 23 chr5 43671465 43671596 -155958554 - FRAM SINE Alu -32 144 1 1678 149 41 30 chr5 43671606 43671901 -155958249 - AluJb SINE Alu -14 298 1 396 153 14 0 chr5 43671901 43671973 -155958177 + LTR41 LTR ERVL 700 772 -1 493 223 69 8 chr5 43671978 43672108 -155958042 + L1MC4 LINE L1 7781 7918 -124 228 280 17 59 chr5 43672139 43672257 -155957893 + L1MC4 LINE L1 7904 8016 -26 1731 157 7 27 chr5 43672274 43672567 -155957583 + AluJb SINE Alu 1 287 -25 215 159 23 0 chr5 43673364 43673408 -155956742 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 264 269 184 18 chr5 43673432 43673741 -155956409 + LTR16A1 LTR ERVL 55 457 0 381 228 53 132 chr5 43673991 43674219 -155955931 - L1ME4a LINE L1 -1353 4793 4584 1523 154 82 18 chr5 43674293 43674573 -155955577 - AluJo SINE Alu -14 298 1 495 0 0 0 chr5 43674989 43675044 -155955106 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 2313 101 0 0 chr5 43675342 43675638 -155954512 - AluSx SINE Alu -16 296 1 25 0 0 0 chr5 43675690 43675715 -155954435 + AT_rich Low_complexity Low_complexity 1 25 0 1534 108 0 0 chr5 43675791 43675994 -155954156 - AluY SINE Alu -21 290 88 2262 96 7 7 chr5 43677171 43677472 -155952678 - AluSq SINE Alu -12 301 1 597 260 33 69 chr5 43677472 43677776 -155952374 - MER97c DNA MER1_type? -30 1060 768 2040 224 94 4 chr5 43678092 43678593 -155951557 - MER97a DNA MER1_type? -289 605 60 350 74 147 0 chr5 43678830 43678925 -155951225 + L1P4 LINE L1 5379 5487 -687 369 127 0 0 chr5 43679209 43679264 -155950886 - Alu SINE Alu -246 55 1 22 35 0 0 chr5 43679601 43679630 -155950520 + AT_rich Low_complexity Low_complexity 1 29 0 1970 153 0 0 chr5 43679630 43679924 -155950226 - AluSx SINE Alu -18 294 1 2176 256 51 47 chr5 43680046 43681601 -155948549 - L1ME2 LINE L1 -19 6145 4497 2844 136 23 21 chr5 43681704 43682131 -155948019 - MSTA LTR MaLR 0 428 1 226 353 26 33 chr5 43683664 43683817 -155946333 - MIR3 SINE MIR -23 185 34 308 283 8 25 chr5 43683852 43683972 -155946178 - HERV16 LTR ERVL -292 4704 4587 874 289 21 7 chr5 43684024 43684304 -155945846 - HERV16 LTR ERVL -4695 301 18 375 303 34 62 chr5 43684393 43684601 -155945549 - LTR16A LTR ERVL -216 234 33 402 108 0 0 chr5 43685245 43685310 -155944840 + (TG)n Simple_repeat Simple_repeat 2 66 0 434 220 152 40 chr5 43686354 43686677 -155943473 - HAL1b LINE L1 -26 1322 964 771 274 69 33 chr5 43686727 43687150 -155943000 - HAL1b LINE L1 -451 897 460 2121 132 58 28 chr5 43687150 43687514 -155942636 + THE1C LTR MaLR 1 375 0 2701 134 9 9 chr5 43687516 43687940 -155942210 + THE1C-int LTR MaLR 3 426 -1154 1221 175 57 39 chr5 43687979 43688259 -155941891 + THE1C LTR MaLR 91 375 0 2321 167 53 13 chr5 43689216 43689665 -155940485 + MLT1C LTR MaLR 1 467 0 26 30 0 0 chr5 43692125 43692158 -155937992 + AT_rich Low_complexity Low_complexity 1 33 0 5531 153 30 39 chr5 43692874 43693358 -155936792 - L1MA5A LINE L1 -8 6289 5802 240 35 0 0 chr5 43693358 43693387 -155936763 + (TATG)n Simple_repeat Simple_repeat 4 32 0 5531 153 30 39 chr5 43693387 43694522 -155935628 - L1MA5A LINE L1 -495 5802 4702 234 0 0 0 chr5 43694522 43694548 -155935602 + (TG)n Simple_repeat Simple_repeat 1 26 0 5531 153 30 39 chr5 43694548 43695028 -155935122 - L1MA5A LINE L1 -1595 4702 4219 5120 105 21 3 chr5 43695710 43696464 -155933686 - L1PA11 LINE L1 -1 6173 5406 396 297 159 47 chr5 43696483 43696823 -155933327 - LTR16C LTR ERVL 0 491 114 254 349 114 30 chr5 43697870 43697956 -155932194 - L2 LINE L2 -2 3270 3193 2758 88 0 6 chr5 43697956 43698318 -155931832 - THE1B LTR MaLR -2 362 3 254 349 114 30 chr5 43698318 43698823 -155931327 - L2 LINE L2 -79 3193 2587 22 56 0 0 chr5 43698882 43698918 -155931232 + AT_rich Low_complexity Low_complexity 1 36 0 2355 88 20 0 chr5 43700328 43700633 -155929517 - AluY SINE Alu 0 311 1 512 333 91 21 chr5 43700828 43701167 -155928983 - L3 LINE CR1 -171 1406 1044 23 68 0 0 chr5 43701363 43701407 -155928743 + AT_rich Low_complexity Low_complexity 1 44 0 180 176 0 0 chr5 43701414 43701448 -155928702 + T-rich Low_complexity Low_complexity 1 34 0 461 330 105 72 chr5 43701455 43702393 -155927757 - L2 LINE L2 -32 3240 2266 610 356 134 27 chr5 43702891 43703705 -155926445 - L3 LINE CR1 -248 1329 429 264 148 25 49 chr5 43703816 43703897 -155926253 + A-rich Low_complexity Low_complexity 4 82 0 413 266 144 21 chr5 43704424 43704751 -155925399 - L1ME4a LINE L1 -230 5891 5525 207 188 0 0 chr5 43704792 43704840 -155925310 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 372 300 9 27 chr5 43705085 43705195 -155924955 + L2 LINE L2 2636 2743 -571 249 312 128 28 chr5 43705500 43705641 -155924509 + L2 LINE L2 3118 3272 0 225 364 66 20 chr5 43706628 43706826 -155923324 + MIR SINE MIR 6 212 -50 205 271 14 57 chr5 43706948 43707018 -155923132 + L3 LINE CR1 317 383 -1194 335 91 0 18 chr5 43707454 43707509 -155922641 - MLT2A2 LTR ERVL 0 453 400 483 73 0 0 chr5 43707512 43707580 -155922570 + (TA)n Simple_repeat Simple_repeat 1 68 0 224 327 0 0 chr5 43707580 43707635 -155922515 + L2 LINE L2 3213 3267 -5 405 121 36 0 chr5 43707756 43707839 -155922311 + (TA)n Simple_repeat Simple_repeat 2 87 0 2624 86 70 3 chr5 43707844 43708218 -155921932 - MLT2A1 LTR ERVL -45 399 1 2001 151 0 0 chr5 43709277 43709582 -155920568 - AluSx SINE Alu -7 305 1 283 306 121 40 chr5 43709784 43709908 -155920242 + L2 LINE L2 3175 3308 -5 247 255 0 0 chr5 43709993 43710044 -155920106 + (CA)n Simple_repeat Simple_repeat 2 52 0 303 256 217 31 chr5 43710750 43710879 -155919271 - MIR SINE MIR -102 160 8 338 94 19 0 chr5 43710952 43711005 -155919145 - L1PA13 LINE L1 -4570 2217 2164 521 253 230 20 chr5 43711005 43711301 -155918849 - MER31B LTR ERV1 -108 358 1 251 286 48 0 chr5 43711567 43711630 -155918520 - MIR3 SINE MIR -13 195 130 22 0 0 0 chr5 43711849 43711871 -155918279 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr5 43712050 43712092 -155918058 + AT_rich Low_complexity Low_complexity 1 42 0 5346 130 9 14 chr5 43713490 43715428 -155914722 - L1PA15 LINE L1 -13 6152 4220 774 314 51 40 chr5 43716436 43717024 -155913126 - L2 LINE L2 -126 3187 2576 2322 268 106 20 chr5 43717024 43717781 -155912369 - L2 LINE L2 -1756 1558 737 274 320 0 0 chr5 43717866 43717944 -155912206 - L2 LINE L2 -2801 513 436 350 130 58 0 chr5 43718059 43718128 -155912022 - L1PA16 LINE L1 -6 6160 6088 1252 164 2 8 chr5 43718128 43718346 -155911804 - L1MC/D LINE L1 -585 5581 5386 * 9136 199 40 19 chr5 43718340 43720084 -155910066 - L1PA16 LINE L1 -2 6164 4458 1964 116 4 4 chr5 43720084 43720359 -155909791 + AluSx SINE Alu 1 275 -37 509 44 15 0 chr5 43720363 43720431 -155909719 + (GAAA)n Simple_repeat Simple_repeat 3 71 0 9136 199 40 19 chr5 43720431 43721913 -155908237 - L1PA16 LINE L1 -1710 4456 2864 393 258 158 8 chr5 43722202 43722322 -155907828 - L2 LINE L2 0 3313 3176 369 282 43 17 chr5 43722506 43722623 -155907527 - MIR3 SINE MIR -49 159 40 221 152 43 0 chr5 43723820 43723866 -155906284 + T-rich Low_complexity Low_complexity 2 49 0 548 289 100 21 chr5 43724494 43724733 -155905417 - MIR SINE MIR -2 260 3 1762 171 61 3 chr5 43725271 43725616 -155904534 - MLT1A1 LTR MaLR 0 365 1 641 321 123 17 chr5 43726197 43726546 -155903604 + MLT1J2 LTR MaLR 58 443 -7 603 217 30 42 chr5 43727024 43727190 -155902960 + MLT1D LTR MaLR 1 164 -341 799 223 10 17 chr5 43727438 43727638 -155902512 + MLT1D LTR MaLR 208 401 -104 1268 212 111 55 chr5 43728098 43728238 -155901912 + L1ME2 LINE L1 5562 5693 -471 261 0 0 0 chr5 43728238 43728267 -155901883 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1828 117 4 18 chr5 43728272 43728553 -155901597 - AluSp SINE Alu -32 281 5 1268 212 111 55 chr5 43728553 43728883 -155901267 + L1ME2 LINE L1 5696 6065 -99 293 360 120 42 chr5 43730199 43730368 -155899782 + L3 LINE CR1 357 511 -1066 2344 127 16 24 chr5 43730368 43730746 -155899404 - THE1C LTR MaLR 0 375 1 293 360 120 42 chr5 43730746 43730984 -155899166 + L3 LINE CR1 511 796 -781 374 335 75 28 chr5 43731104 43731358 -155898792 + L3 LINE CR1 821 1086 -491 180 379 85 29 chr5 43732550 43732822 -155897328 + L2 LINE L2 2564 2850 -464 832 230 123 12 chr5 43733049 43733321 -155896829 - L1ME3A LINE L1 -282 5880 5581 1623 199 101 58 chr5 43733339 43733749 -155896401 + MLT1E2 LTR MaLR 120 511 -115 207 0 0 0 chr5 43733749 43733772 -155896378 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2067 125 0 0 chr5 43733781 43734076 -155896074 - AluSx SINE Alu -17 295 1 1623 199 101 58 chr5 43734076 43734138 -155896012 + MLT1E2 LTR MaLR 518 623 -3 569 267 67 0 chr5 43734140 43734320 -155895830 - L1ME LINE L1 -551 6013 5822 198 0 0 0 chr5 43734925 43734947 -155895203 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 1061 222 61 84 chr5 43735466 43736037 -155894113 - L1ME LINE L1 -4160 2380 1823 1144 195 158 17 chr5 43737867 43738164 -155891986 + MER2 DNA MER2_type 7 345 0 442 338 58 58 chr5 43738236 43738615 -155891535 - L1M4 LINE L1 -2162 3984 3606 1034 191 149 40 chr5 43738875 43739204 -155890946 + MLT1A1 LTR MaLR 1 365 0 1750 147 13 36 chr5 43742185 43742492 -155887658 - AluJo SINE Alu -12 300 1 2147 113 17 0 chr5 43742854 43743146 -155887004 + AluSq SINE Alu 4 300 -13 674 245 64 64 chr5 43743603 43743852 -155886298 + MIR SINE MIR 1 249 -13 1386 113 5 54 chr5 43744052 43744316 -155885834 - AluSq SINE Alu 0 327 75 189 250 45 0 chr5 43744501 43744545 -155885605 - MIR SINE MIR -118 144 99 1980 129 0 4 chr5 43745304 43745612 -155884538 - AluSc SINE Alu 0 307 1 274 324 39 29 chr5 43746813 43746915 -155883235 + L2 LINE L2 3196 3298 -15 1816 153 10 75 chr5 43747668 43748055 -155882095 + MLT1B LTR MaLR 29 390 0 185 389 0 0 chr5 43748931 43748985 -155881165 - MIR SINE MIR -156 106 53 240 35 0 0 chr5 43749002 43749031 -155881119 + (TTA)n Simple_repeat Simple_repeat 3 31 0 1499 207 66 16 chr5 43751989 43752352 -155877798 + MLT1D LTR MaLR 1 381 -124 2248 98 3 13 chr5 43752625 43752930 -155877220 - AluSg SINE Alu -8 302 1 260 223 148 94 chr5 43753092 43753232 -155876918 - LTR33A LTR ERVL 0 523 366 4431 49 16 0 chr5 43753232 43753810 -155876340 + L1PA5 LINE L1 5578 6164 0 260 223 148 94 chr5 43753810 43753870 -155876280 - LTR33A LTR ERVL -157 366 311 * 537 305 75 0 chr5 43753859 43754046 -155876104 - LTR33A LTR ERVL -316 207 7 205 241 86 0 chr5 43755670 43755728 -155874422 - L2 LINE L2 -87 3226 3164 947 211 11 79 chr5 43755742 43756022 -155874128 + MLT1B LTR MaLR 1 261 -129 533 154 0 0 chr5 43756026 43756104 -155874046 + AluJb SINE Alu 7 84 -228 13256 93 10 0 chr5 43756104 43757924 -155872226 + L1PA5 LINE L1 1 1839 -4307 10902 46 5 0 chr5 43757928 43760044 -155870106 + L1PA5 LINE L1 4021 6146 -8 1052 188 4 52 chr5 43760074 43760324 -155869826 + AluJb SINE Alu 75 312 0 657 201 60 0 chr5 43760334 43760468 -155869682 + MLT1B LTR MaLR 249 390 0 213 354 13 0 chr5 43762268 43762347 -155867803 + MIR SINE MIR 72 151 -57 21 71 0 0 chr5 43762473 43762515 -155867635 + AT_rich Low_complexity Low_complexity 1 42 0 255 290 32 58 chr5 43763114 43763269 -155866881 + L1MEd LINE L1 1100 1250 -4869 244 313 42 0 chr5 43763240 43763336 -155866814 + L1PBa LINE L1 1314 1413 -1077 * 226 259 0 0 chr5 43763424 43763478 -155866672 + L1PBa LINE L1 1690 1743 -4387 2117 103 0 58 chr5 43763692 43764003 -155866147 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr5 43764006 43764029 -155866121 + AT_rich Low_complexity Low_complexity 1 23 0 1102 162 14 48 chr5 43764337 43764547 -155865603 + AluJb SINE Alu 27 229 -83 6315 28 0 0 chr5 43764688 43765439 -155864711 - L1PA3 LINE L1 -876 5270 4520 7448 24 2 6 chr5 43765439 43766319 -155863831 + L1PA3 LINE L1 5273 6155 0 2052 135 0 0 chr5 43766437 43766719 -155863431 + AluSx SINE Alu 1 282 -30 243 0 0 0 chr5 43766721 43766748 -155863402 + (TC)n Simple_repeat Simple_repeat 2 28 0 342 0 0 0 chr5 43766748 43766786 -155863364 + (CA)n Simple_repeat Simple_repeat 1 38 0 2213 112 3 3 chr5 43767395 43767707 -155862443 + AluSx SINE Alu 1 312 0 369 277 128 14 chr5 43768396 43768544 -155861606 + MIR SINE MIR 85 249 -13 743 174 30 0 chr5 43769597 43769729 -155860421 + AluJo SINE Alu 1 136 -176 269 292 5 108 chr5 43770456 43770641 -155859509 + MIR SINE MIR 69 234 -28 8619 138 19 11 chr5 43770781 43772190 -155857960 - Tigger1 DNA MER2_type -998 1420 1 383 61 0 0 chr5 43772332 43772381 -155857769 - Tigger1 DNA MER2_type -2004 414 366 296 383 0 7 chr5 43772917 43773066 -155857084 - MIR SINE MIR -49 213 66 255 31 0 0 chr5 43773095 43773127 -155857023 + (TG)n Simple_repeat Simple_repeat 2 33 0 2271 95 3 3 chr5 43775147 43775452 -155854698 + AluSc SINE Alu 2 306 -3 194 162 27 122 chr5 43775759 43775833 -155854317 - L2 LINE L2 -1280 2034 1968 370 73 0 0 chr5 43776212 43776267 -155853883 - MER73 LTR ERVL -589 55 1 1459 247 25 11 chr5 43776267 43776627 -155853523 + L1MC4 LINE L1 6691 7055 -987 637 253 118 19 chr5 43776639 43777206 -155852944 + L1MC4 LINE L1 7160 7710 -98 1712 156 75 28 chr5 43778691 43779049 -155851101 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr5 43779154 43779177 -155850973 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr5 43779597 43779624 -155850526 + AT_rich Low_complexity Low_complexity 1 27 0 874 294 124 21 chr5 43779887 43780306 -155849844 - HERV16 LTR ERVL -4131 865 404 876 240 35 143 chr5 43780684 43781168 -155848982 - LTR16A1 LTR ERVL 0 457 26 310 298 18 9 chr5 43781175 43781289 -155848861 + MER94 DNA DNA 20 134 0 337 175 194 0 chr5 43782272 43782323 -155847827 - L1MA10 LINE L1 -8 6326 6276 428 231 36 98 chr5 43782323 43782600 -155847550 - L1ME1 LINE L1 -67 6099 5840 26 50 0 0 chr5 43782733 43782773 -155847377 + AT_rich Low_complexity Low_complexity 1 40 0 1197 227 14 15 chr5 43782876 43783345 -155846805 + L1ME LINE L1 5077 5545 -621 434 351 105 61 chr5 43783885 43784684 -155845466 + L2 LINE L2 2430 3272 0 1820 152 71 0 chr5 43784858 43785181 -155844969 + MER7A DNA MER2_type 2 345 -1 352 276 68 23 chr5 43786402 43786623 -155843527 - L1MA8 LINE L1 -4 6287 6057 2155 120 0 13 chr5 43787344 43787660 -155842490 + AluSx SINE Alu 1 312 0 249 279 110 55 chr5 43787685 43787993 -155842157 + L1MEd LINE L1 930 1254 -4865 2297 128 19 3 chr5 43788173 43788520 -155841630 - L1PB1 LINE L1 -5 6146 5791 267 31 0 0 chr5 43788520 43788552 -155841598 + (TG)n Simple_repeat Simple_repeat 2 33 0 2297 128 19 3 chr5 43788552 43788563 -155841587 - L1PB1 LINE L1 -360 5791 5782 214 200 0 29 chr5 43788563 43788633 -155841517 + (TA)n Simple_repeat Simple_repeat 1 68 0 2434 105 20 26 chr5 43788633 43788741 -155841409 - L1PB1 LINE L1 -360 5791 5684 1982 132 66 33 chr5 43788741 43789104 -155841046 - THE1C LTR MaLR 0 375 1 2434 105 20 26 chr5 43789104 43789386 -155840764 - L1PB1 LINE L1 -467 5684 5403 187 430 20 7 chr5 43790060 43790209 -155839941 - L2 LINE L2 -188 3084 2934 21 36 0 0 chr5 43790276 43790304 -155839846 + AT_rich Low_complexity Low_complexity 1 28 0 187 313 31 0 chr5 43790332 43790396 -155839754 + L3b LINE CR1 1429 1494 -89 959 197 138 84 chr5 43790442 43790812 -155839338 - MLT1B LTR MaLR 0 390 1 30 77 0 0 chr5 43791613 43791678 -155838472 + AT_rich Low_complexity Low_complexity 1 65 0 491 227 153 7 chr5 43792234 43792384 -155837766 + Charlie1 DNA MER1_type 7 178 -2583 * 1799 222 32 7 chr5 43792378 43792815 -155837335 + Charlie1 DNA MER1_type 2055 2502 -259 25 31 0 0 chr5 43793138 43793170 -155836980 + AT_rich Low_complexity Low_complexity 1 32 0 1960 107 64 4 chr5 43793261 43793542 -155836608 - AluSq SINE Alu -15 298 1 185 308 0 55 chr5 43795389 43795480 -155834670 + L2 LINE L2 2932 3017 -255 2257 100 3 0 chr5 43795842 43796142 -155834008 + AluSc SINE Alu 1 301 -8 193 238 24 0 chr5 43796306 43796348 -155833802 - MIR3 SINE MIR -50 158 116 183 42 0 0 chr5 43796421 43796445 -155833705 + (CA)n Simple_repeat Simple_repeat 2 25 0 2316 102 7 0 chr5 43798247 43798552 -155831598 + AluSx SINE Alu 1 307 -5 441 0 0 0 chr5 43798597 43798646 -155831504 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 233 221 0 128 chr5 43799006 43799092 -155831058 - MIR SINE MIR -118 144 70 219 69 0 0 chr5 43799165 43799194 -155830956 + (CA)n Simple_repeat Simple_repeat 2 30 0 287 271 0 0 chr5 43799354 43799424 -155830726 + MER112 DNA MER1_type 179 248 -12 868 250 18 5 chr5 43799619 43799843 -155830307 + L1PA10 LINE L1 9 235 -5640 4655 220 1 32 chr5 43799844 43801067 -155829083 + L1PA10 LINE L1 356 2326 -4135 18361 144 7 13 chr5 43801067 43804984 -155825166 + L1PA10 LINE L1 2528 6482 -1 2441 123 17 3 chr5 43805528 43805887 -155824263 + THE1B LTR MaLR 1 364 0 183 129 0 0 chr5 43805927 43805958 -155824192 + (CA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr5 43805958 43805987 -155824163 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 43806837 43806860 -155823290 + AT_rich Low_complexity Low_complexity 1 23 0 228 237 15 30 chr5 43807199 43807330 -155822820 + (TA)n Simple_repeat Simple_repeat 1 129 0 1129 181 157 35 chr5 43808383 43808733 -155821417 + MSTB LTR MaLR 22 426 0 236 340 113 16 chr5 43809297 43809482 -155820668 + L2 LINE L2 2554 2756 -558 * 979 265 13 4 chr5 43809481 43809711 -155820439 - MIR SINE MIR -29 233 2 727 361 89 11 chr5 43809711 43810218 -155819932 + L2 LINE L2 2722 3269 -44 28 0 0 0 chr5 43810236 43810264 -155819886 + AT_rich Low_complexity Low_complexity 1 28 0 26 74 0 0 chr5 43810315 43810369 -155819781 + AT_rich Low_complexity Low_complexity 1 54 0 396 273 224 0 chr5 43811280 43811423 -155818727 + MER5A DNA MER1_type 9 183 -6 660 299 80 34 chr5 43812308 43812542 -155817608 - MLT1I LTR MaLR -19 390 135 294 29 0 0 chr5 43812542 43812577 -155817573 + (TA)n Simple_repeat Simple_repeat 1 35 0 660 299 80 34 chr5 43812577 43812666 -155817484 - MLT1I LTR MaLR -274 135 52 233 397 30 15 chr5 43813599 43813730 -155816420 + MIR3 SINE MIR 40 172 -36 2401 87 0 3 chr5 43816435 43816746 -155813404 - AluY SINE Alu -1 310 1 1685 239 117 46 chr5 43817976 43818653 -155811497 + MER50 LTR ERV1 10 734 0 299 256 105 0 chr5 43820057 43820143 -155810007 + MLT1I LTR MaLR 311 405 -4 346 341 49 40 chr5 43820240 43820463 -155809687 - L2 LINE L2 -19 3253 3029 284 113 75 0 chr5 43820464 43820517 -155809633 - MLT2A1 LTR ERVL 0 444 388 341 155 54 0 chr5 43820520 43820649 -155809501 + (TA)n Simple_repeat Simple_repeat 1 136 0 2596 89 45 11 chr5 43820651 43821032 -155809118 - MLT2A1 LTR ERVL -48 396 3 19737 79 8 5 chr5 43821034 43824748 -155805402 - HERVL-A1 LTR ERVL 0 5654 1868 327 108 50 36 chr5 43824748 43824887 -155805263 + (TA)n Simple_repeat Simple_repeat 1 141 0 272 192 62 27 chr5 43824889 43825035 -155805115 + (TATAA)n Simple_repeat Simple_repeat 2 152 0 359 124 65 20 chr5 43825035 43825188 -155804962 + (TA)n Simple_repeat Simple_repeat 2 161 0 2522 118 46 8 chr5 43825188 43825577 -155804573 - MLT2A1 LTR ERVL -40 404 1 327 304 0 36 chr5 43825888 43826000 -155804150 + MER5A DNA MER1_type 69 176 -13 2449 104 30 3 chr5 43826273 43826638 -155803512 - THE1C LTR MaLR 0 375 1 2253 158 54 15 chr5 43828274 43828684 -155801466 + MSTB LTR MaLR 1 426 0 1900 187 0 3 chr5 43828684 43829031 -155801119 + MSTB-int LTR MaLR 1 346 -1305 1392 107 0 0 chr5 43829033 43829230 -155800920 + MER107 DNA MER1_type 1 197 0 6833 195 22 15 chr5 43829231 43829284 -155800866 + MSTB-int LTR MaLR 349 400 -1251 2162 113 0 3 chr5 43829284 43829568 -155800582 + AluSq SINE Alu 13 295 -18 6833 195 22 15 chr5 43829568 43830802 -155799348 + MSTB-int LTR MaLR 400 1645 -6 2254 189 19 12 chr5 43830808 43831231 -155798919 + MSTB LTR MaLR 1 426 0 14430 145 29 18 chr5 43832337 43834785 -155795365 + Tigger2 DNA MER2_type 1 2474 -244 353 273 47 16 chr5 43836151 43836279 -155793871 - LTR33A LTR ERVL 0 523 392 312 269 52 45 chr5 43836565 43836699 -155793451 - LTR50 LTR ERVL -636 159 25 2335 80 0 3 chr5 43836800 43837111 -155793039 - AluY SINE Alu -1 310 1 2406 112 60 5 chr5 43838629 43839012 -155791138 + MLT2A1 LTR ERVL 1 404 -40 316 211 105 0 chr5 43839013 43839089 -155791061 - L1MC4 LINE L1 -1350 6692 6609 218 59 78 20 chr5 43839089 43839140 -155791010 + (TA)n Simple_repeat Simple_repeat 1 54 0 583 115 29 23 chr5 43839143 43839317 -155790833 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 446 140 10 30 chr5 43839320 43839420 -155790730 + (TA)n Simple_repeat Simple_repeat 2 99 0 42 58 0 29 chr5 43840138 43840241 -155789909 + AT_rich Low_complexity Low_complexity 1 100 0 763 53 18 44 chr5 43840977 43841091 -155789059 + AluY SINE Alu 96 206 -105 667 296 83 37 chr5 43842041 43842275 -155787875 - MLT1I LTR MaLR -19 390 135 603 0 0 0 chr5 43842275 43842342 -155787808 + (TA)n Simple_repeat Simple_repeat 2 68 0 667 296 83 37 chr5 43842342 43842431 -155787719 - MLT1I LTR MaLR -274 135 52 1457 181 70 24 chr5 43842817 43843115 -155787035 + MER2 DNA MER2_type 34 345 0 231 208 0 0 chr5 43843115 43843160 -155786990 + MLT2B1 LTR ERVL 474 518 -2 2461 225 31 54 chr5 43843165 43843837 -155786313 + MLT-int LTR MaLR 2 658 -1077 463 299 7 29 chr5 43843931 43844068 -155786082 + MLT-int LTR MaLR 1303 1436 -299 2788 163 29 36 chr5 43844068 43844656 -155785494 - L1PB4 LINE L1 -1 6155 5572 1177 184 33 8 chr5 43844664 43845023 -155785127 - L1PB4 LINE L1 -748 5398 5083 * 1522 197 11 4 chr5 43845017 43845296 -155784854 + MLT1A1-int LTR MaLR 1448 1728 -7 1295 204 12 23 chr5 43845348 43845663 -155784487 + MLT1A1 LTR MaLR 21 365 0 234 334 14 24 chr5 43845677 43845776 -155784374 + MER5A DNA MER1_type 74 172 -6 309 291 82 51 chr5 43846113 43846271 -155783879 - L1ME4a LINE L1 -197 5924 5762 256 330 62 6 chr5 43846333 43846509 -155783641 + L1M4 LINE L1 5368 5553 -625 253 273 27 27 chr5 43846966 43847076 -155783074 - HAL1 LINE L1 -145 2362 2253 439 319 77 93 chr5 43849216 43850174 -155779976 - L2 LINE L2 -1480 1834 892 330 310 121 0 chr5 43851247 43851363 -155778787 - L2 LINE L2 0 3313 3184 260 284 26 116 chr5 43851432 43851510 -155778640 - MIR SINE MIR -59 203 120 1465 178 75 0 chr5 43851510 43851791 -155778359 + AluJo SINE Alu 1 302 0 260 284 26 116 chr5 43851791 43851902 -155778248 - MIR SINE MIR -142 120 31 194 327 53 44 chr5 43853213 43853326 -155776824 - MIR3 SINE MIR -26 182 69 297 197 0 33 chr5 43853512 43853573 -155776577 - MIR3 SINE MIR -49 159 101 220 292 216 18 chr5 43853949 43854120 -155776030 + L2 LINE L2 2434 2638 -676 337 242 75 33 chr5 43854895 43855015 -155775135 + MIR SINE MIR 9 133 -129 440 315 183 0 chr5 43855039 43855252 -155774898 - MIR SINE MIR -2 260 9 1535 167 36 42 chr5 43855379 43855685 -155774465 + AluJb SINE Alu 1 304 -8 193 250 16 31 chr5 43855910 43855974 -155774176 - MIR SINE MIR -93 169 107 2140 241 70 42 chr5 43857428 43858067 -155772083 + MER21B LTR ERV1 147 803 -60 235 238 36 36 chr5 43858749 43858833 -155771317 + GA-rich Low_complexity Low_complexity 3 86 0 189 303 0 30 chr5 43858887 43858953 -155771197 - MIR SINE MIR -100 162 99 206 333 12 37 chr5 43859462 43859543 -155770607 - L2 LINE L2 -1 3312 3234 3802 105 52 12 chr5 43859914 43860507 -155769643 - L1PB1 LINE L1 -1 6150 5534 11576 232 49 32 chr5 43860507 43861353 -155768797 - L1M2 LINE L1 -655 5721 4891 275 64 0 21 chr5 43861353 43861400 -155768750 + (TA)n Simple_repeat Simple_repeat 2 47 0 11576 232 49 32 chr5 43861400 43862605 -155767545 - L1M2 LINE L1 -1485 4891 3708 2191 85 0 3 chr5 43862605 43862887 -155767263 - AluY SINE Alu -11 300 20 11576 232 49 32 chr5 43862887 43863815 -155766335 - L1M2 LINE L1 -2668 3708 2797 1828 135 40 0 chr5 43863815 43864089 -155766061 + AluSq SINE Alu 2 286 -27 333 0 0 0 chr5 43864093 43864130 -155766020 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 11576 232 49 32 chr5 43864130 43866959 -155763191 - L1M2 LINE L1 -3581 2795 14 208 213 43 21 chr5 43866995 43867042 -155763108 + MIR3 SINE MIR 116 163 -45 * 408 326 74 37 chr5 43867039 43867281 -155762869 - MIR SINE MIR 0 262 12 25 65 0 0 chr5 43868038 43868084 -155762066 + AT_rich Low_complexity Low_complexity 1 46 0 1986 233 52 22 chr5 43868421 43868923 -155761227 - LTR53 LTR ERVL -2 517 1 23 33 0 0 chr5 43869032 43869062 -155761088 + AT_rich Low_complexity Low_complexity 1 30 0 9505 40 1 70 chr5 43869145 43870663 -155759487 - L1PA5 LINE L1 -607 5547 4135 4980 39 0 0 chr5 43870663 43871254 -155758896 + L1PA5 LINE L1 5560 6151 -3 1358 271 95 45 chr5 43871969 43872058 -155758092 + L1ME LINE L1 1315 1398 -4998 189 74 0 0 chr5 43872058 43872085 -155758065 + (CA)n Simple_repeat Simple_repeat 2 28 0 1358 271 95 45 chr5 43872085 43872901 -155757249 + L1ME LINE L1 1398 2281 -4115 1995 106 3 11 chr5 43872901 43873221 -155756929 + AluSc SINE Alu 2 319 0 1358 271 95 45 chr5 43873221 43873347 -155756803 + L1ME LINE L1 2281 2399 -3997 * 1835 269 67 12 chr5 43873339 43873607 -155756543 + L1ME LINE L1 2301 2553 -3662 312 27 0 0 chr5 43873607 43873644 -155756506 + (CA)n Simple_repeat Simple_repeat 2 38 0 1835 269 67 12 chr5 43873644 43874108 -155756042 + L1ME LINE L1 2553 3073 -3142 861 69 9 0 chr5 43874111 43874258 -155755892 + AluY SINE Alu 175 322 0 323 291 24 20 chr5 43874259 43874510 -155755640 + L1ME LINE L1 3076 3327 -2888 1115 231 62 52 chr5 43874684 43875070 -155755080 + MLT1B LTR MaLR 1 390 0 3114 198 53 4 chr5 43875070 43875753 -155754397 + MLT1B-int LTR MaLR 1 716 -655 744 224 149 13 chr5 43876118 43876432 -155753718 + MLT1B-int LTR MaLR 1308 1735 0 1396 197 39 75 chr5 43876432 43876827 -155753323 + MLT1B LTR MaLR 1 365 0 851 230 22 55 chr5 43876827 43877101 -155753049 + L1ME LINE L1 4584 4848 -1367 943 450 54 9 chr5 43877102 43877435 -155752715 - MLT1A1 LTR MaLR -1 364 17 1652 239 61 76 chr5 43877449 43878503 -155751647 + L1ME LINE L1 4846 5888 -347 * 4106 166 18 6 chr5 43878499 43879634 -155750516 - L1PA16 LINE L1 -248 5918 4773 1417 206 64 87 chr5 43879634 43880105 -155750045 - MER66A LTR ERV1 0 478 97 3526 221 17 14 chr5 43880172 43881057 -155749093 - L1 LINE L1 -1371 4775 3888 1937 143 29 0 chr5 43881057 43881337 -155748813 - AluSx SINE Alu -24 288 1 2162 96 16 3 chr5 43881348 43881651 -155748499 - AluY SINE Alu -4 307 1 1404 250 26 11 chr5 43881661 43882129 -155748021 - L1PA16 LINE L1 -2547 3599 3125 1309 177 69 134 chr5 43882808 43882963 -155747187 + MSTD LTR MaLR 6 169 -227 2081 123 0 0 chr5 43882963 43883263 -155746887 + AluSg1 SINE Alu 1 300 -9 1309 177 69 134 chr5 43883263 43883525 -155746625 + MSTD LTR MaLR 169 396 0 279 305 39 29 chr5 43883672 43883809 -155746341 - MIR SINE MIR -13 195 58 182 62 31 0 chr5 43883935 43883967 -155746183 + (TTTTTG)n Simple_repeat Simple_repeat 1 33 0 1213 188 58 0 chr5 43884255 43884478 -155745672 + MER46A DNA MER2_type 1 236 0 2905 83 76 102 chr5 43884676 43885204 -155744946 - THE1B-int LTR MaLR -1066 514 1 2280 137 14 14 chr5 43885204 43885568 -155744582 - THE1B LTR MaLR 0 364 1 352 122 171 6 chr5 43885672 43885775 -155744375 - L1MA8 LINE L1 -81 6231 6113 * 447 135 153 5 chr5 43885773 43885879 -155744271 + L1MA8 LINE L1 6180 6286 -5 870 257 101 3 chr5 43885909 43886197 -155743953 - Charlie1 DNA MER1_type -268 2493 2178 333 47 0 0 chr5 43886199 43886242 -155743908 + (CA)n Simple_repeat Simple_repeat 2 44 0 246 211 11 95 chr5 43886327 43886422 -155743728 - MER112 DNA MER1_type -173 87 1 30 0 0 0 chr5 43886480 43886510 -155743640 + AT_rich Low_complexity Low_complexity 1 30 0 274 290 186 8 chr5 43886529 43886653 -155743497 + MLT1J2 LTR MaLR 1 146 -304 282 187 41 6 chr5 43886679 43886831 -155743319 + CT-rich Low_complexity Low_complexity 1 157 0 384 276 99 11 chr5 43887081 43887262 -155742888 + L1ME3A LINE L1 5767 5963 -207 715 163 0 57 chr5 43888125 43888266 -155741884 + AluJo/FLAM SINE Alu 1 133 -169 295 163 0 0 chr5 43888266 43888315 -155741835 + AluSg/x SINE Alu 136 184 -118 1249 135 14 24 chr5 43888319 43888527 -155741623 + AluSp SINE Alu 101 306 -7 279 0 0 0 chr5 43888527 43888558 -155741592 + (GA)n Simple_repeat Simple_repeat 1 31 0 369 43 0 0 chr5 43888569 43888616 -155741534 + (AATAG)n Simple_repeat Simple_repeat 1 47 0 414 142 43 21 chr5 43888672 43888725 -155741425 + GA-rich Low_complexity Low_complexity 2 52 -93 225 0 0 0 chr5 43888725 43888750 -155741400 + (TG)n Simple_repeat Simple_repeat 1 25 0 414 142 43 21 chr5 43888750 43888837 -155741313 + GA-rich Low_complexity Low_complexity 52 145 0 23 33 0 0 chr5 43889406 43889436 -155740714 + AT_rich Low_complexity Low_complexity 1 30 0 253 113 0 38 chr5 43889525 43889578 -155740572 + (GAA)n Simple_repeat Simple_repeat 1 51 0 229 255 184 0 chr5 43889599 43889697 -155740453 - MIR SINE MIR -24 238 123 453 19 0 0 chr5 43889820 43889874 -155740276 + (CA)n Simple_repeat Simple_repeat 2 55 0 244 263 13 39 chr5 43890023 43890114 -155740036 - MER5A DNA MER1_type -11 178 79 203 239 0 60 chr5 43890284 43890351 -155739799 - L2 LINE L2 -1 3271 3209 258 323 70 38 chr5 43890538 43890696 -155739454 - MIR SINE MIR -36 226 64 1137 117 6 6 chr5 43891287 43891467 -155738683 - L1MA3 LINE L1 -468 5837 5658 1755 184 0 25 chr5 43891903 43892223 -155737927 + AluJb SINE Alu 1 312 0 198 354 30 56 chr5 43893345 43893543 -155736607 - L2 LINE L2 -553 2761 2569 182 353 163 32 chr5 43894215 43895015 -155735135 - L2 LINE L2 -849 2465 1562 1266 234 21 14 chr5 43895734 43896070 -155734080 + MSTD LTR MaLR 1 395 -1 284 306 82 41 chr5 43896366 43896513 -155733637 - MIR SINE MIR -41 221 69 1408 122 10 5 chr5 43896566 43896771 -155733379 - AluSc SINE Alu -7 302 97 400 335 141 15 chr5 43897260 43897466 -155732684 + MIR SINE MIR 26 257 -5 1712 230 71 9 chr5 43898693 43899128 -155731022 - MLT1C LTR MaLR 0 467 6 218 321 37 0 chr5 43899131 43899212 -155730938 + MIR SINE MIR 176 259 -3 430 152 0 25 chr5 43899980 43900059 -155730091 + L1MB1 LINE L1 5798 5874 -294 195 100 0 0 chr5 43900316 43900346 -155729804 + (T)n Simple_repeat Simple_repeat 1 30 0 1853 199 58 12 chr5 43900738 43901150 -155729000 + MSTB1 LTR MaLR 1 431 -1 26 0 0 0 chr5 43901220 43901246 -155728904 + AT_rich Low_complexity Low_complexity 1 26 0 4534 109 11 48 chr5 43903450 43904164 -155725986 + LTR12 LTR ERV1 1 688 0 23 54 0 0 chr5 43904284 43904321 -155725829 + AT_rich Low_complexity Low_complexity 1 37 0 1225 78 0 6 chr5 43904484 43904650 -155725500 + L1PA4 LINE L1 5970 6134 -21 1051 31 0 0 chr5 43905539 43905666 -155724484 - L1PA5 LINE L1 0 6154 6028 247 241 19 0 chr5 43905852 43905906 -155724244 - MER5B DNA MER1_type -1 177 123 688 213 119 0 chr5 43905912 43906072 -155724078 + MLT2B1 LTR ERVL 1 179 -341 717 216 11 60 chr5 43906285 43906470 -155723680 + MER5B DNA MER1_type 3 178 0 205 414 0 0 chr5 43906472 43906559 -155723591 - MIR3 SINE MIR -50 158 72 304 281 65 54 chr5 43906958 43907143 -155723007 + LTR16C LTR ERVL 305 491 0 536 335 89 58 chr5 43908032 43908488 -155721662 - L2 LINE L2 -1 3312 2840 2268 101 3 0 chr5 43908488 43908784 -155721366 + AluSq SINE Alu 3 299 -14 536 335 89 58 chr5 43908784 43908960 -155721190 - L2 LINE L2 -473 2840 2671 840 228 140 19 chr5 43909024 43909331 -155720819 - LTR37A LTR ERV1 -50 376 33 2887 116 16 5 chr5 43910079 43910528 -155719622 + L1PA13 LINE L1 5708 6161 -2 1261 237 124 41 chr5 43912215 43912485 -155717665 + MLT2F LTR ERVL 1 247 -416 504 0 0 0 chr5 43912485 43912541 -155717609 + (TG)n Simple_repeat Simple_repeat 2 57 0 1261 237 124 41 chr5 43912541 43912790 -155717360 + MLT2F LTR ERVL 247 609 -54 230 224 0 0 chr5 43912833 43912882 -155717268 + MLT2F LTR ERVL 615 663 0 832 243 79 16 chr5 43913606 43913911 -155716239 - MER33 DNA MER1_type 0 324 1 392 333 43 29 chr5 43914700 43914834 -155715316 - MIR SINE MIR -1 261 121 2345 100 0 0 chr5 43914834 43915134 -155715016 + AluSg SINE Alu 1 300 -10 392 333 43 29 chr5 43915134 43915206 -155714944 - MIR SINE MIR -141 121 52 1236 207 73 50 chr5 43915345 43915702 -155714448 - MLT1A1 LTR MaLR 0 365 1 450 258 65 38 chr5 43915729 43915915 -155714235 + MLT1J LTR MaLR 68 258 -253 207 273 55 0 chr5 43916072 43916127 -155714023 - MIR SINE MIR -87 175 118 180 317 50 0 chr5 43916678 43916738 -155713412 + L3 LINE CR1 1403 1465 -112 346 339 81 6 chr5 43917273 43917447 -155712703 - MIR SINE MIR -56 206 20 630 102 0 0 chr5 43918449 43918537 -155711613 + AluSg SINE Alu 1 88 -222 603 335 50 48 chr5 43919197 43919727 -155710423 + L2 LINE L2 2726 3258 -55 350 183 158 24 chr5 43919740 43919822 -155710328 + MSTD LTR MaLR 1 93 -335 832 206 146 73 chr5 43920001 43920248 -155709902 + MSTD LTR MaLR 108 394 -2 6932 220 68 32 chr5 43920250 43921925 -155708225 + MSTD-int LTR MaLR 1 1735 0 865 217 48 14 chr5 43921951 43922218 -155707932 + MSTD LTR MaLR 76 383 -5 237 257 54 27 chr5 43924008 43924082 -155706068 + MER81 DNA DNA 39 114 0 200 329 112 7 chr5 43924242 43924394 -155705756 - MIR SINE MIR -11 251 84 2306 66 0 60 chr5 43925050 43925367 -155704783 - AluSx SINE Alu -14 298 1 588 273 169 43 chr5 43926064 43926390 -155703760 + MLT1J2 LTR MaLR 69 435 -15 403 357 126 36 chr5 43926542 43926875 -155703275 + L2 LINE L2 2906 3268 -4 1655 214 43 0 chr5 43927177 43927527 -155702623 + MLT1A1 LTR MaLR 1 365 0 2332 234 70 19 chr5 43928074 43928284 -155701866 - MLT1F1 LTR MaLR 0 567 369 2322 229 33 52 chr5 43928284 43928983 -155701167 - MER76 LTR ERV -2 686 1 2332 234 70 19 chr5 43928983 43929311 -155700839 - MLT1F1 LTR MaLR -198 369 1 280 337 56 0 chr5 43930404 43930493 -155699657 + L2 LINE L2 3137 3230 -42 24 0 0 0 chr5 43930716 43930740 -155699410 + AT_rich Low_complexity Low_complexity 1 24 0 310 293 141 54 chr5 43930815 43931057 -155699093 - L2 LINE L2 -36 3277 3015 1138 142 0 12 chr5 43931251 43931420 -155698730 - FRAM SINE Alu -11 165 1 253 274 39 49 chr5 43931621 43931723 -155698427 + L1MDa LINE L1 130 230 -6310 2074 239 44 53 chr5 43932150 43932176 -155697974 + L1MDa LINE L1 861 886 -5657 1523 221 29 32 chr5 43932176 43932551 -155697599 - MLT1A2 LTR MaLR 0 374 1 2074 239 44 53 chr5 43932551 43932942 -155697208 + L1MDa LINE L1 886 1272 -5271 270 0 0 0 chr5 43932942 43932972 -155697178 + (TA)n Simple_repeat Simple_repeat 1 30 0 2074 239 44 53 chr5 43932972 43933255 -155696895 + L1MDa LINE L1 1272 1556 -4987 4513 177 38 9 chr5 43933291 43933590 -155696560 + L1MB3 LINE L1 5167 5456 -727 180 0 0 0 chr5 43933590 43933610 -155696540 + (CA)n Simple_repeat Simple_repeat 1 20 0 4513 177 38 9 chr5 43933610 43934286 -155695864 + L1MB3 LINE L1 5456 6172 -11 2811 250 85 16 chr5 43934305 43935682 -155694468 + L1MDa LINE L1 1585 3055 -3485 1039 98 35 29 chr5 43935682 43935855 -155694295 + L1MA1 LINE L1 5881 6054 -248 231 281 0 0 chr5 43935850 43935907 -155694243 + L1MDa LINE L1 3088 3144 -3396 * 816 261 19 0 chr5 43935947 43936158 -155693992 + L1MDa LINE L1 4404 4618 -1922 807 235 166 11 chr5 43936152 43936253 -155693897 - L1MD2 LINE L1 -104 6255 6171 * 192 40 0 0 chr5 43936253 43936278 -155693872 + (TG)n Simple_repeat Simple_repeat 2 26 0 807 235 166 11 chr5 43936278 43936453 -155693697 - L1MD2 LINE L1 -188 6171 5936 495 108 14 5 chr5 43936453 43936591 -155693559 + MER4A-int LTR ERV1 603 807 -5791 360 43 0 0 chr5 43936608 43936654 -155693496 + (CA)n Simple_repeat Simple_repeat 1 46 0 269 189 0 38 chr5 43936723 43936776 -155693374 + LTR49 LTR ERV1 263 313 -282 6448 110 34 48 chr5 43936776 43937935 -155692215 + MER4A-int LTR ERV1 503 1448 -3567 1972 148 0 7 chr5 43937935 43938238 -155691912 - AluSq SINE Alu -11 302 2 6448 110 34 48 chr5 43938238 43938438 -155691712 + MER4A-int LTR ERV1 1448 1649 -3366 1227 153 127 0 chr5 43938439 43938667 -155691483 - LTR8 LTR ERV1 -434 257 1 3605 114 85 17 chr5 43938667 43939179 -155690971 + MER4A-int LTR ERV1 2737 3416 -3182 198 71 0 0 chr5 43939179 43939207 -155690943 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 3605 114 85 17 chr5 43939207 43939498 -155690652 + MER4A-int LTR ERV1 3416 3686 -2912 * 15660 110 59 19 chr5 43939492 43940277 -155689873 + MER4A-int LTR ERV1 3837 4589 -2009 2333 82 7 0 chr5 43940277 43940569 -155689581 - AluY SINE Alu -15 296 3 15660 110 59 19 chr5 43940569 43942438 -155687712 + MER4A-int LTR ERV1 4589 6596 -2 525 153 20 20 chr5 43942442 43942540 -155687610 + MER4A LTR ERV1 1 98 -566 1682 139 11 78 chr5 43942540 43942910 -155687240 + MER4A LTR ERV1 261 664 0 201 365 84 28 chr5 43942963 43943212 -155686938 - L2 LINE L2 -1022 2292 2030 454 250 109 68 chr5 43943801 43944049 -155686101 - MIR SINE MIR -1 261 4 899 269 150 37 chr5 43944873 43945334 -155684816 - LTR33A LTR ERVL -9 514 2 224 239 0 0 chr5 43946105 43946151 -155683999 + (CATATA)n Simple_repeat Simple_repeat 5 50 0 893 291 12 53 chr5 43946161 43946480 -155683670 - MER93a LTR ERV1 -4 398 93 23 33 0 0 chr5 43946657 43946687 -155683463 + AT_rich Low_complexity Low_complexity 1 30 0 283 266 74 35 chr5 43946689 43946892 -155683258 - L1ME LINE L1 -297 5824 5614 293 315 85 12 chr5 43947016 43947181 -155682969 - MLT1I LTR MaLR -199 210 34 2437 171 32 45 chr5 43948323 43948884 -155681266 + MER41A LTR ERV1 1 554 0 250 296 0 34 chr5 43949090 43949178 -155680972 + A-rich Low_complexity Low_complexity 1 85 0 1281 248 118 25 chr5 43950265 43950292 -155679858 + L1M4 LINE L1 3563 3586 -2560 2454 60 0 17 chr5 43950292 43950592 -155679558 - AluY SINE Alu -16 295 1 1281 248 118 25 chr5 43950592 43951258 -155678892 + L1M4 LINE L1 3586 4321 -1825 284 77 0 0 chr5 43951259 43951298 -155678852 - Alu SINE Alu -264 39 1 3451 184 24 42 chr5 43951721 43952509 -155677641 + LTR1 LTR ERV1 12 785 0 7160 89 8 19 chr5 43952586 43953654 -155676496 + MER11C LTR ERVK 1 1057 -14 48527 86 10 2 chr5 43953693 43960408 -155669742 + HERVK11 LTR ERVK 1 6765 -1188 7742 58 0 2 chr5 43960395 43961394 -155668756 + HERVK11 LTR ERVK 6957 7953 0 * 7414 88 5 9 chr5 43961394 43962456 -155667694 + MER11C LTR ERVK 1 1057 -14 943 206 150 14 chr5 43962506 43962792 -155667358 + LTR36 LTR ERV1 54 378 -233 297 322 84 30 chr5 43962817 43963019 -155667131 + MIR SINE MIR 2 214 -48 309 89 0 0 chr5 43963366 43963411 -155666739 + (CA)n Simple_repeat Simple_repeat 2 46 0 951 225 151 73 chr5 43963411 43963874 -155666276 + MLT1D LTR MaLR 2 500 -5 396 0 0 0 chr5 43963874 43963918 -155666232 + (CA)n Simple_repeat Simple_repeat 2 45 0 228 35 0 0 chr5 43963917 43963946 -155666204 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 204 67 0 0 chr5 43963945 43963975 -155666175 + (CA)n Simple_repeat Simple_repeat 1 30 0 * 2719 13 0 10 chr5 43964613 43964919 -155665231 + AluYa5 SINE Alu 1 303 -8 361 332 40 35 chr5 43965347 43965573 -155664577 + MIR SINE MIR 23 249 -13 939 203 14 48 chr5 43965815 43966069 -155664081 - MLT1A2 LTR MaLR -3 502 131 415 137 0 0 chr5 43966080 43966153 -155663997 - MER4E LTR ERV1 0 779 707 3158 135 37 0 chr5 43966183 43966775 -155663375 - MER4B LTR ERV1 0 779 1 13002 119 25 33 chr5 43966775 43968108 -155662042 - MER4B-int LTR ERV1 0 6758 5415 2774 13 0 0 chr5 43968108 43968410 -155661740 + AluY SINE Alu 1 302 -9 13002 119 25 33 chr5 43968410 43969886 -155660264 - MER4B-int LTR ERV1 -1343 5415 3883 1257 158 8 22 chr5 43969886 43970375 -155659775 + MER4A LTR ERV1 1 550 -114 452 238 113 19 chr5 43970375 43970535 -155659615 + LTR28 LTR ERV1 1 175 -845 230 268 14 0 chr5 43970562 43970633 -155659517 + LTR1 LTR ERV1 119 190 -595 * 1880 199 130 18 chr5 43970600 43971170 -155658980 + LTR28 LTR ERV1 298 1010 -10 2454 204 82 79 chr5 43971182 43972078 -155658072 + LTR28-int LTR ERV1 2 4061 -1156 306 153 0 34 chr5 43972078 43972137 -155658013 + LTR28 LTR ERV1 964 1020 0 * 809 99 0 0 chr5 43972137 43972247 -155657903 + MER4B LTR ERV1 492 601 -9 6400 138 32 7 chr5 43972250 43973388 -155656762 - MER4B-int LTR ERV1 -2864 3894 2729 355 118 0 0 chr5 43973388 43973439 -155656711 + MER30 DNA MER1_type 1 51 -179 771 146 0 0 chr5 43973439 43973569 -155656581 + (GAA)n Simple_repeat Simple_repeat 1 130 0 720 142 179 0 chr5 43973571 43973733 -155656417 + MER30 DNA MER1_type 39 229 -1 4924 130 16 39 chr5 43973734 43974767 -155655383 - MER4B-int LTR ERV1 -4026 2732 1723 28098 122 14 57 chr5 43974767 43981191 -155648959 - L1PA7 LINE L1 -4 6150 12 3770 149 50 72 chr5 43981207 43982367 -155647783 - MER4B-int LTR ERV1 -5324 1434 492 1584 131 50 28 chr5 43982364 43982647 -155647503 - MER4B-int LTR ERV1 -6469 289 1 * 3047 144 39 2 chr5 43982647 43983237 -155646913 - MER4B LTR ERV1 0 779 3 492 206 0 0 chr5 43983238 43983330 -155646820 - MLT1A2 LTR MaLR -279 95 4 207 302 38 36 chr5 43984455 43984538 -155645612 + MIR SINE MIR 74 155 -58 242 56 28 0 chr5 43984585 43984621 -155645529 + (TAGA)n Simple_repeat Simple_repeat 3 39 0 367 355 59 0 chr5 43985052 43985221 -155644929 + MIR SINE MIR 84 262 0 525 288 28 33 chr5 43986579 43986791 -155643359 + MER20 DNA MER1_type 5 215 -4 536 197 23 0 chr5 43987107 43987239 -155642911 + CT-rich Low_complexity Low_complexity 5 139 0 784 184 0 29 chr5 43987270 43987406 -155642744 - FLAM_C SINE Alu 0 133 2 674 201 7 0 chr5 43988052 43988191 -155641959 - L1 LINE L1 -950 5196 5057 28 91 0 0 chr5 43989165 43989242 -155640908 + AT_rich Low_complexity Low_complexity 1 77 0 21 36 0 0 chr5 43989810 43989838 -155640312 + AT_rich Low_complexity Low_complexity 1 28 0 562 287 82 10 chr5 43993498 43993693 -155636457 - MER63A DNA MER1_type -1 209 1 321 174 452 9 chr5 43993833 43993948 -155636202 + MER5A DNA MER1_type 17 182 -7 2595 62 0 0 chr5 43993971 43994279 -155635871 - AluY SINE Alu -3 308 1 294 29 0 0 chr5 43994302 43994337 -155635813 + (TG)n Simple_repeat Simple_repeat 2 36 0 1448 211 93 39 chr5 43994337 43994768 -155635382 + MSTB2 LTR MaLR 4 457 0 256 185 19 0 chr5 43996741 43996795 -155633355 + L1MC4 LINE L1 6658 6712 -1330 351 167 32 16 chr5 43996832 43996958 -155633192 + (TA)n Simple_repeat Simple_repeat 1 128 0 756 265 62 0 chr5 44000188 44000399 -155629751 + MER58A DNA MER1_type 1 224 0 320 275 69 38 chr5 44000562 44000693 -155629457 + LTR33 LTR ERVL 44 178 -343 6053 136 38 15 chr5 44002011 44003399 -155626751 + L1MA6 LINE L1 4877 6298 -2 2050 117 3 3 chr5 44003613 44003896 -155626254 + AluSg SINE Alu 1 283 -27 345 318 16 44 chr5 44004023 44004196 -155625954 + MIR SINE MIR 31 199 -9 4586 126 19 0 chr5 44005096 44005834 -155624316 + L1MA4A LINE L1 5542 6293 -10 1420 119 15 50 chr5 44006784 44006943 -155623207 - L1MA3 LINE L1 0 6305 6157 2768 7 0 0 chr5 44006943 44007241 -155622909 - AluYa5 SINE Alu -13 298 1 1420 119 15 50 chr5 44007241 44007342 -155622808 - L1MA3 LINE L1 -148 6157 6054 930 124 71 6 chr5 44007691 44007860 -155622290 - Tigger2 DNA MER2_type -55 2663 2484 1202 297 112 55 chr5 44007860 44008717 -155621433 - HAL1 LINE L1 -1268 1239 315 1620 197 11 27 chr5 44008717 44009088 -155621062 + MLT1A1 LTR MaLR 1 365 0 1202 297 112 55 chr5 44009088 44009234 -155620916 - HAL1 LINE L1 -2192 315 179 2325 89 0 0 chr5 44009350 44009643 -155620507 - AluY SINE Alu -18 293 1 2159 125 21 3 chr5 44009921 44010258 -155619892 - Tigger2 DNA MER2_type -236 2482 2140 1918 111 29 4 chr5 44010415 44010695 -155619455 + AluSx SINE Alu 1 287 -25 21 36 0 0 chr5 44010695 44010723 -155619427 + AT_rich Low_complexity Low_complexity 1 28 0 756 321 141 5 chr5 44010864 44011260 -155618890 - LTR16A LTR ERVL 0 450 1 2215 101 3 10 chr5 44011883 44012191 -155617959 - AluSx SINE Alu -6 306 1 1624 220 31 3 chr5 44013128 44013483 -155616667 + MLT1A1 LTR MaLR 1 365 0 751 323 82 19 chr5 44014457 44014776 -155615374 + L1PA16 LINE L1 -593 4294967041 -6448 268 245 166 36 chr5 44015023 44015162 -155614988 + L1PA16 LINE L1 769 925 -5268 11868 211 23 56 chr5 44015882 44017323 -155612827 + L1PA16 LINE L1 803 2289 -3934 247 200 0 71 chr5 44017323 44017393 -155612757 - AluJb SINE Alu -78 224 160 11868 211 23 56 chr5 44017393 44019723 -155610427 + L1PA16 LINE L1 2289 4359 -1864 534 16 0 0 chr5 44019723 44019786 -155610364 + (CA)n Simple_repeat Simple_repeat 2 64 0 11868 211 23 56 chr5 44019786 44021592 -155608558 + L1PA16 LINE L1 4359 6222 -1 360 371 104 9 chr5 44022873 44023094 -155607056 - L2 LINE L2 0 3272 3031 2555 151 20 36 chr5 44023351 44023849 -155606301 + LTR2B LTR ERV1 1 490 0 12955 136 39 17 chr5 44025856 44028025 -155602125 - Tigger1 DNA MER2_type 0 2418 202 13204 104 5 8 chr5 44028025 44028516 -155601634 + L1P LINE L1 2708 3199 -2947 1953 134 0 4 chr5 44028516 44028823 -155601327 - AluSg SINE Alu 0 311 6 13204 104 5 8 chr5 44028823 44030280 -155599870 + L1P LINE L1 3199 4651 -1495 341 167 0 0 chr5 44030272 44030344 -155599806 + L1P LINE L1 3223 3294 -2852 * 6514 76 11 8 chr5 44030345 44031209 -155598941 + L1PA7 LINE L1 4657 5529 -625 2771 13 0 0 chr5 44031209 44031513 -155598637 - AluYa5 SINE Alu -7 304 1 6514 76 11 8 chr5 44031513 44032140 -155598010 + L1PA7 LINE L1 5529 6152 -2 228 211 18 0 chr5 44032193 44032250 -155597900 + L1MC4 LINE L1 7905 7962 -80 902 72 16 8 chr5 44032291 44032416 -155597734 - L1PA10 LINE L1 -4 6164 6039 1179 257 136 33 chr5 44032426 44033204 -155596946 + L1ME3 LINE L1 4277 4973 -1189 2169 96 0 7 chr5 44033204 44033495 -155596655 - AluSc SINE Alu -18 291 3 1179 257 136 33 chr5 44033495 44034174 -155595976 + L1ME3 LINE L1 4973 5872 -290 316 328 77 34 chr5 44034485 44034750 -155595400 + L1ME LINE L1 5511 5798 -444 202 100 0 60 chr5 44034756 44034806 -155595344 + (TTA)n Simple_repeat Simple_repeat 3 49 0 242 265 0 0 chr5 44034868 44034917 -155595233 + polypurine Low_complexity Low_complexity 4 52 0 25 65 0 0 chr5 44034971 44035017 -155595133 + AT_rich Low_complexity Low_complexity 1 46 0 452 319 101 42 chr5 44035128 44035674 -155594476 + L1ME4a LINE L1 5317 5894 -227 2278 115 0 3 chr5 44035779 44036091 -155594059 - AluSx SINE Alu -1 311 1 1618 119 56 7 chr5 44037513 44037815 -155592335 + L1MA7 LINE L1 5972 6288 -3 2348 192 113 8 chr5 44037919 44038424 -155591726 + MER74A LTR ERVL 1 558 0 37 62 0 0 chr5 44038647 44038712 -155591438 + AT_rich Low_complexity Low_complexity 1 65 0 806 281 33 5 chr5 44038900 44039110 -155591040 + MER58A DNA MER1_type 6 221 -3 243 0 0 0 chr5 44039142 44039169 -155590981 + (TATAA)n Simple_repeat Simple_repeat 4 30 0 194 79 0 53 chr5 44039650 44039688 -155590462 + (GGA)n Simple_repeat Simple_repeat 3 38 0 1951 115 21 3 chr5 44040194 44040482 -155589668 + AluSq SINE Alu 1 293 -20 244 333 7 37 chr5 44042033 44042168 -155587982 - L1ME LINE L1 -304 5817 5687 552 295 98 27 chr5 44042203 44042427 -155587723 - MIR SINE MIR -21 241 2 365 326 67 19 chr5 44043564 44043753 -155586397 + MIR SINE MIR 32 221 -41 387 278 37 62 chr5 44044436 44044598 -155585552 + MER5B DNA MER1_type 19 176 -2 1792 111 0 0 chr5 44045572 44045807 -155584343 - AluSq SINE Alu -78 235 1 197 291 36 0 chr5 44045870 44045925 -155584225 + L2 LINE L2 3216 3272 0 637 322 105 42 chr5 44046239 44046745 -155583405 + MLT1H LTR MaLR 12 549 0 1873 223 49 10 chr5 44046762 44047251 -155582899 - L1 LINE L1 -3213 2933 2426 225 308 88 22 chr5 44047610 44047701 -155582449 - L2 LINE L2 -8 3264 3168 1230 263 65 31 chr5 44047748 44048227 -155581923 - Charlie4a DNA MER1_type -13 495 1 436 262 78 0 chr5 44048466 44048607 -155581543 + MER112 DNA MER1_type 109 260 0 1731 161 50 7 chr5 44049676 44049975 -155580175 + AluSx SINE Alu 1 312 0 363 289 0 0 chr5 44050226 44050316 -155579834 - L2 LINE L2 -1 3312 3223 287 299 123 10 chr5 44050645 44050783 -155579367 - MIR SINE MIR -62 146 45 2385 224 31 56 chr5 44050827 44051466 -155578684 + MLT1E2 LTR MaLR 1 623 -3 238 319 67 7 chr5 44052156 44052291 -155577859 - L1ME LINE L1 -390 5731 5589 2239 98 3 3 chr5 44052395 44052700 -155577450 + AluSc SINE Alu 1 305 -4 257 301 222 26 chr5 44053812 44053965 -155576185 + MER5A DNA MER1_type 6 188 -1 307 303 124 6 chr5 44054001 44054152 -155575998 - MER5A DNA MER1_type -14 175 4 207 167 0 0 chr5 44054591 44054633 -155575517 + (TTG)n Simple_repeat Simple_repeat 1 42 0 195 129 0 0 chr5 44055033 44055064 -155575086 + (CA)n Simple_repeat Simple_repeat 1 31 0 855 219 28 11 chr5 44055240 44055417 -155574733 + MLT1H LTR MaLR 1 180 -369 330 216 17 121 chr5 44055417 44055533 -155574617 - ORSL DNA AcHobo 0 275 172 1582 199 0 34 chr5 44055534 44055831 -155574319 + AluJb SINE Alu 2 288 -24 768 275 169 13 chr5 44056018 44056331 -155573819 + MLT1H LTR MaLR 188 549 0 259 281 31 31 chr5 44056463 44056559 -155573591 + L1MEd LINE L1 1158 1253 -4866 2671 143 39 12 chr5 44056892 44057376 -155572774 + L1MA7 LINE L1 5336 5832 -459 900 96 0 0 chr5 44057376 44057491 -155572659 + AluSp/q SINE Alu 175 289 -24 2739 137 0 38 chr5 44057491 44057988 -155572162 + L1MA7 LINE L1 5814 6291 0 336 158 40 79 chr5 44058044 44058145 -155572005 - L1MC4 LINE L1 -1 8041 7945 693 307 44 16 chr5 44058522 44058887 -155571263 - HAL1 LINE L1 -281 2226 1852 228 290 110 30 chr5 44058906 44059006 -155571144 + L2 LINE L2 3163 3270 -2 589 327 88 0 chr5 44059900 44060105 -155570045 + MIR SINE MIR 9 231 -31 413 308 38 32 chr5 44060394 44060579 -155569571 - MIR3 SINE MIR -2 206 21 180 0 0 0 chr5 44060735 44060755 -155569395 + (CATATA)n Simple_repeat Simple_repeat 3 22 0 2094 128 13 0 chr5 44061208 44061512 -155568638 + AluSx SINE Alu 4 311 -1 355 224 33 59 chr5 44062434 44062586 -155567564 - L1MC5 LINE L1 -50 7911 7764 198 0 0 0 chr5 44062607 44062629 -155567521 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1630 193 11 4 chr5 44062631 44062911 -155567239 - AluJo SINE Alu -29 283 2 31 68 0 0 chr5 44062940 44062999 -155567151 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr5 44064026 44064047 -155566103 + AT_rich Low_complexity Low_complexity 1 21 0 262 239 15 0 chr5 44064049 44064116 -155566034 - L1MC5 LINE L1 -399 7562 7495 699 90 156 0 chr5 44064125 44064247 -155565903 + L1MA8 LINE L1 6147 6287 -4 1531 243 47 67 chr5 44064275 44064978 -155565172 - L1MC5 LINE L1 -451 7510 6822 219 263 0 0 chr5 44065030 44065087 -155565063 + (TA)n Simple_repeat Simple_repeat 1 57 0 1351 199 107 0 chr5 44066102 44066374 -155563776 - MLT1D LTR MaLR 0 505 205 364 157 14 43 chr5 44066373 44066443 -155563707 - MLT1D LTR MaLR -435 70 3 * 375 226 58 58 chr5 44066447 44066584 -155563566 - MIR SINE MIR -21 241 105 3243 206 72 3 chr5 44067166 44067850 -155562300 - MER44D DNA MER2_type 0 605 3 5188 152 13 9 chr5 44067867 44068222 -155561928 - L1PB4 LINE L1 -15 6141 5789 438 20 0 0 chr5 44068222 44068273 -155561877 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 5188 152 13 9 chr5 44068273 44068645 -155561505 - L1PB4 LINE L1 -367 5789 5407 1918 186 103 3 chr5 44068645 44069032 -155561118 + MSTB LTR MaLR 1 426 0 5188 152 13 9 chr5 44069032 44069241 -155560909 - L1PB4 LINE L1 -749 5407 5200 629 251 17 29 chr5 44069932 44070107 -155560043 + MLT1H1 LTR MaLR 383 555 0 1113 296 64 14 chr5 44070180 44070602 -155559548 - MLT1J2 LTR MaLR -7 443 1 259 318 64 0 chr5 44071387 44071497 -155558653 - MER117 DNA MER1_type -56 141 25 534 331 104 21 chr5 44071552 44071839 -155558311 - L2 LINE L2 -7 3265 2955 2343 85 0 16 chr5 44072327 44072634 -155557516 - AluSc SINE Alu -7 302 1 30 0 0 0 chr5 44073422 44073452 -155556698 + AT_rich Low_complexity Low_complexity 1 30 0 32 0 0 0 chr5 44073594 44073626 -155556524 + AT_rich Low_complexity Low_complexity 1 32 0 2511 112 0 32 chr5 44074807 44074847 -155555303 - THE1B LTR MaLR 0 364 324 2211 64 26 51 chr5 44074847 44075159 -155554991 + AluY SINE Alu 1 304 -7 2511 112 0 32 chr5 44075159 44075493 -155554657 - THE1B LTR MaLR -40 324 2 268 318 0 0 chr5 44076595 44076705 -155553445 + A-rich Low_complexity Low_complexity 1 110 0 189 0 0 0 chr5 44078061 44078082 -155552068 + (GGCTG)n Simple_repeat Simple_repeat 1 21 0 2416 243 71 8 chr5 44078402 44078990 -155551160 - MLT1E2 LTR MaLR 0 626 2 946 260 180 17 chr5 44079827 44080243 -155549907 + MLT1F1 LTR MaLR 74 557 -10 2225 110 0 0 chr5 44080433 44080732 -155549418 + AluY SINE Alu 1 299 -12 192 382 0 0 chr5 44080867 44080922 -155549228 + MIR SINE MIR 40 94 -114 353 298 91 50 chr5 44081189 44081640 -155548510 + L1ME1 LINE L1 5333 5797 -553 894 184 6 12 chr5 44081764 44081927 -155548223 + AluJo SINE Alu 125 286 -26 2123 106 3 3 chr5 44082380 44082687 -155547463 - AluSg SINE Alu 0 307 1 604 113 130 9 chr5 44083736 44083851 -155546299 - MSTC LTR MaLR 0 428 300 237 300 126 57 chr5 44083970 44084200 -155545950 + L2 LINE L2 3068 3313 0 1481 205 3 24 chr5 44084406 44084704 -155545446 - AluJo SINE Alu -20 292 1 858 157 59 39 chr5 44084704 44084908 -155545242 - MER3 DNA MER1_type 0 209 2 1256 137 0 81 chr5 44084941 44085175 -155544975 - AluSc SINE Alu -4 305 91 424 103 39 13 chr5 44085774 44085852 -155544298 + MADE1 DNA Mariner 1 80 0 381 43 0 0 chr5 44086401 44086448 -155543702 + (TG)n Simple_repeat Simple_repeat 2 48 0 273 286 167 0 chr5 44087832 44087958 -155542192 + MIR3 SINE MIR 55 201 -7 1134 248 30 21 chr5 44089094 44089433 -155540717 + L1ME1 LINE L1 5808 6149 -17 1442 253 100 42 chr5 44089983 44090485 -155539665 + MLT1F LTR MaLR 12 542 0 726 253 70 38 chr5 44090773 44091245 -155538905 + MLT1H1 LTR MaLR 1 524 -31 1225 89 0 0 chr5 44091384 44091542 -155538608 - AluY SINE Alu -7 304 147 1993 117 0 32 chr5 44093830 44094132 -155536018 + AluSx SINE Alu 9 301 0 558 67 0 0 chr5 44094390 44094465 -155535685 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 2619 216 16 46 chr5 44094518 44095188 -155534962 + MER82 DNA MER2_type 3 652 -1 180 0 0 0 chr5 44095219 44095239 -155534911 + (TG)n Simple_repeat Simple_repeat 1 20 0 370 231 22 22 chr5 44095240 44095331 -155534819 + MLT1A1 LTR MaLR 26 116 -249 4426 192 50 7 chr5 44095347 44096174 -155533976 + L1MA2 LINE L1 17 878 -6687 * 15771 158 15 10 chr5 44096159 44101012 -155529138 + L1MA2 LINE L1 2806 7685 -38 234 158 0 0 chr5 44101025 44101063 -155529087 - L1M1 LINE L1 -442 5862 5825 * 274 51 0 0 chr5 44101062 44101101 -155529049 + L1MA2 LINE L1 7685 7723 0 643 214 55 39 chr5 44101137 44101319 -155528831 + MLT1A1 LTR MaLR 170 354 -11 5374 136 17 25 chr5 44101774 44102613 -155527537 - L1PA15 LINE L1 -8 6157 5315 2598 80 119 5 chr5 44102613 44103015 -155527135 - LTR7 LTR ERV1 -2 448 1 5374 136 17 25 chr5 44103015 44103633 -155526517 - L1PA15 LINE L1 -850 5315 4693 374 385 91 23 chr5 44103934 44104362 -155525788 + L2 LINE L2 2852 3308 -5 372 270 133 52 chr5 44104591 44104824 -155525326 - MER110A LTR ERV1 0 468 217 255 61 0 0 chr5 44104851 44104884 -155525266 + (TTTTG)n Simple_repeat Simple_repeat 1 33 0 263 221 39 0 chr5 44105656 44105733 -155524417 - MER116 DNA Mariner 0 80 1 224 254 142 65 chr5 44105733 44105902 -155524248 - MIR3 SINE MIR -14 194 13 32 57 0 0 chr5 44106655 44106708 -155523442 + AT_rich Low_complexity Low_complexity 1 53 0 344 269 87 20 chr5 44106736 44106885 -155523265 + L1ME LINE L1 5491 5645 -519 445 257 28 73 chr5 44107167 44107227 -155522923 - L1ME1 LINE L1 -6 6160 6099 2829 16 0 0 chr5 44107227 44107539 -155522611 - AluYb8 SINE Alu -6 312 1 445 257 28 73 chr5 44107539 44107712 -155522438 - L1ME1 LINE L1 -67 6099 5938 242 220 0 34 chr5 44107832 44107891 -155522259 + LTR33A LTR ERVL 62 118 -405 2682 263 14 41 chr5 44107956 44108738 -155521412 - L1M4 LINE L1 -5774 768 8 22 35 0 0 chr5 44108979 44109008 -155521142 + AT_rich Low_complexity Low_complexity 1 29 0 2312 76 0 10 chr5 44109459 44109750 -155520400 + AluY SINE Alu 1 288 -23 180 0 0 0 chr5 44109757 44109777 -155520373 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 281 81 0 0 chr5 44110246 44110283 -155519867 - HSMAR1 DNA Mariner 0 1287 1251 855 354 85 44 chr5 44111186 44111638 -155518512 - L2 LINE L2 -675 2639 2207 1961 143 3 0 chr5 44111638 44111938 -155518212 + AluSx SINE Alu 1 301 -11 855 354 85 44 chr5 44111938 44112423 -155517727 - L2 LINE L2 -1107 2207 1663 894 174 52 19 chr5 44112447 44112659 -155517491 + L1MA6 LINE L1 6082 6300 0 949 67 17 34 chr5 44112730 44112924 -155517226 + (GAAA)n Simple_repeat Simple_repeat 1 365 0 949 67 17 34 chr5 44112924 44113102 -155517048 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 1518 216 111 23 chr5 44113274 44113625 -155516525 + MLT2B1 LTR ERVL 1 382 -138 525 55 0 0 chr5 44113660 44113733 -155516417 + (GA)n Simple_repeat Simple_repeat 2 74 0 1101 267 63 31 chr5 44113742 44114187 -155515963 + L1ME3 LINE L1 1489 1947 -4449 516 296 79 32 chr5 44114208 44114581 -155515569 + L1ME3 LINE L1 5065 5457 -758 414 324 73 21 chr5 44114699 44114986 -155515164 + L1ME3 LINE L1 5595 5896 -335 2153 165 43 30 chr5 44116538 44117083 -155513067 + MLT2A2 LTR ERVL 1 554 0 1405 200 23 42 chr5 44118545 44118855 -155511295 + AluJb SINE Alu 1 304 -8 636 316 34 17 chr5 44118961 44119195 -155510955 + MIR SINE MIR 13 250 -12 969 149 12 0 chr5 44119511 44119672 -155510478 + U1 snRNA snRNA 1 163 -2 287 250 33 100 chr5 44120655 44120775 -155509375 + MIR3 SINE MIR 82 193 -15 252 0 0 0 chr5 44121603 44121631 -155508519 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 484 232 219 0 chr5 44122918 44123073 -155507077 + MER5A DNA MER1_type 1 189 0 2300 110 36 3 chr5 44123149 44123505 -155506645 - L1PB1 LINE L1 -1 6150 5783 467 59 30 40 chr5 44123506 44123607 -155506543 + (TA)n Simple_repeat Simple_repeat 2 101 0 199 0 0 61 chr5 44123698 44123731 -155506419 + (TA)n Simple_repeat Simple_repeat 1 31 0 505 172 9 38 chr5 44123731 44123838 -155506312 - L1PB1 LINE L1 -377 5777 5678 * 1061 113 5 0 chr5 44123779 44123950 -155506200 + L1PB1 LINE L1 5528 5704 -447 303 348 11 26 chr5 44125020 44125200 -155504950 + MER5A DNA MER1_type 7 173 -5 961 244 162 42 chr5 44125412 44125843 -155504307 - MLT1D LTR MaLR -22 483 1 286 346 60 17 chr5 44127088 44127268 -155502882 - MIR3 SINE MIR -36 172 7 36 23 0 0 chr5 44128045 44128088 -155502062 + AT_rich Low_complexity Low_complexity 1 43 0 897 205 0 0 chr5 44129612 44129773 -155500377 + AluSg/x SINE Alu 137 297 -15 21 0 0 0 chr5 44129780 44129801 -155500349 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 44130009 44130037 -155500113 + AT_rich Low_complexity Low_complexity 1 28 0 2024 175 2 53 chr5 44131478 44131889 -155498261 - MLT1B LTR MaLR 0 390 1 486 279 105 8 chr5 44132250 44132535 -155497615 + L1ME LINE L1 5256 5575 -595 772 321 138 32 chr5 44132741 44133271 -155496879 - L3 LINE CR1 -265 1312 727 195 139 0 0 chr5 44133306 44133342 -155496808 + (TG)n Simple_repeat Simple_repeat 1 36 0 247 260 0 0 chr5 44133350 44133427 -155496723 + (TA)n Simple_repeat Simple_repeat 1 77 0 22 0 0 0 chr5 44133773 44133795 -155496355 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 44134087 44134110 -155496040 + AT_rich Low_complexity Low_complexity 1 23 0 391 286 20 14 chr5 44134137 44134284 -155495866 - MER103 DNA DNA -16 150 3 184 290 140 11 chr5 44134344 44134437 -155495713 - L2 LINE L2 -769 2545 2441 263 313 28 16 chr5 44135397 44135517 -155494633 + MIR SINE MIR 36 153 -64 1101 295 57 26 chr5 44137382 44137806 -155492344 + LTR16C LTR ERVL 53 489 -2 187 337 92 0 chr5 44137811 44137909 -155492241 - L2 LINE L2 -30 3283 3177 904 355 37 9 chr5 44138305 44138654 -155491496 - LTR16A LTR ERVL -26 424 66 333 212 24 35 chr5 44139553 44139638 -155490512 + MIR3 SINE MIR 118 201 -7 604 203 65 54 chr5 44139998 44140222 -155489928 - LTR45 LTR ERV1 -8 609 302 1655 180 76 59 chr5 44140580 44140645 -155489505 - MLT2B1 LTR ERVL -8 512 450 228 100 0 0 chr5 44140645 44140685 -155489465 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1655 180 76 59 chr5 44140685 44140707 -155489443 - MLT2B1 LTR ERVL -70 450 430 2126 143 0 6 chr5 44140707 44141021 -155489129 - AluSx SINE Alu 0 312 1 1655 180 76 59 chr5 44141021 44141383 -155488767 - MLT2B1 LTR ERVL -90 430 1 622 333 95 26 chr5 44141681 44142144 -155488006 + L2 LINE L2 1958 2452 -862 2425 88 0 0 chr5 44143649 44143955 -155486195 - AluSq SINE Alu -7 306 1 25 95 0 0 chr5 44144632 44144706 -155485444 + AT_rich Low_complexity Low_complexity 1 74 0 372 315 91 59 chr5 44144905 44145563 -155484587 - L1MC4a LINE L1 -1875 5933 5255 22 56 0 0 chr5 44145648 44145684 -155484466 + AT_rich Low_complexity Low_complexity 1 36 0 31870 89 9 7 chr5 44146692 44147665 -155482485 - L1PA6 LINE L1 0 6154 5184 207 0 0 0 chr5 44147665 44147688 -155482462 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 31870 89 9 7 chr5 44147688 44152134 -155478016 - L1PA6 LINE L1 -970 5184 724 396 319 65 35 chr5 44153462 44153631 -155476519 - LTR16C LTR ERVL -167 324 151 21 36 0 0 chr5 44153958 44153986 -155476164 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 44154078 44154109 -155476041 + AT_rich Low_complexity Low_complexity 1 31 0 753 371 75 1 chr5 44154396 44154835 -155475315 + L2 LINE L2 2592 3065 -207 180 353 0 0 chr5 44155132 44155200 -155474950 - L2 LINE L2 -961 2353 2286 * 863 305 8 30 chr5 44155185 44155447 -155474703 + MIR SINE MIR 7 262 0 2299 114 0 0 chr5 44155463 44155762 -155474388 - AluSx SINE Alu -13 299 1 1864 150 10 7 chr5 44157392 44157698 -155472452 - AluJo SINE Alu -5 307 1 180 97 0 0 chr5 44157842 44157873 -155472277 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 211 294 0 0 chr5 44160683 44160751 -155469399 + T-rich Low_complexity Low_complexity 1 68 0 409 322 17 0 chr5 44161554 44161672 -155468478 + L2 LINE L2 3151 3270 -2 186 71 0 0 chr5 44161926 44161954 -155468196 + (TC)n Simple_repeat Simple_repeat 2 29 0 308 259 55 34 chr5 44163000 44163132 -155467018 + MIR SINE MIR 8 146 -62 255 61 0 0 chr5 44163505 44163538 -155466612 + (TATG)n Simple_repeat Simple_repeat 3 35 0 2199 162 6 3 chr5 44163538 44163903 -155466247 - MER47A DNA MER2_type 0 366 1 252 272 12 0 chr5 44163933 44164014 -155466136 + (TA)n Simple_repeat Simple_repeat 2 83 0 378 265 13 40 chr5 44164095 44164246 -155465904 - MER103 DNA DNA -4 162 16 1183 176 19 159 chr5 44164344 44164758 -155465392 + MLT1A1 LTR MaLR 5 360 -5 22 0 0 0 chr5 44165586 44165608 -155464542 + AT_rich Low_complexity Low_complexity 1 22 0 439 276 148 35 chr5 44165650 44165940 -155464210 + L1MEd LINE L1 844 1166 -4953 1163 288 44 28 chr5 44165954 44166536 -155463614 + L2 LINE L2 2714 3309 -4 284 325 48 32 chr5 44166777 44166903 -155463247 - MIR SINE MIR -112 150 23 612 203 65 0 chr5 44167238 44167361 -155462789 + MLT1L LTR MaLR 149 279 -336 275 280 32 21 chr5 44167912 44168005 -155462145 - MIR SINE MIR -83 125 32 336 261 33 11 chr5 44168067 44168159 -155461991 - MIR SINE MIR -83 125 32 584 330 27 21 chr5 44168702 44168890 -155461260 + MIR SINE MIR 1 189 -73 393 231 99 16 chr5 44168902 44169023 -155461127 + MIR SINE MIR 132 262 0 240 335 90 57 chr5 44169067 44169401 -155460749 - L2 LINE L2 -23 3290 2946 1832 167 0 0 chr5 44170085 44170378 -155459772 + AluSx SINE Alu 1 293 -19 348 250 45 30 chr5 44171189 44171321 -155458829 + L1MEd LINE L1 1021 1154 -4965 267 275 92 37 chr5 44171421 44171530 -155458620 - L2 LINE L2 -5 3308 3194 1376 223 7 4 chr5 44172676 44172949 -155457201 - AluJo SINE Alu -23 289 16 1851 143 61 30 chr5 44173171 44173534 -155456616 - THE1C LTR MaLR 0 375 2 301 302 69 48 chr5 44174492 44174681 -155455469 + MIR SINE MIR 14 206 -56 22 35 0 0 chr5 44174696 44174725 -155455425 + AT_rich Low_complexity Low_complexity 1 29 0 808 279 79 0 chr5 44174850 44175079 -155455071 + MIR SINE MIR 6 252 -10 2861 112 11 20 chr5 44175587 44176025 -155454125 - MER57B LTR ERV1 0 434 1 1487 113 121 0 chr5 44176025 44176256 -155453894 - MER57B-int LTR ERV1 0 7537 7279 733 132 23 23 chr5 44176256 44176385 -155453765 - LTR54B LTR ERV1 -367 131 3 6892 123 54 10 chr5 44176391 44178127 -155452023 - MER57B-int LTR ERV1 -486 7330 5309 5634 147 44 28 chr5 44178132 44179797 -155450353 - MER57B-int LTR ERV1 -1720 3836 2186 252 137 59 0 chr5 44179793 44179844 -155450306 - MER57B-int LTR ERV1 -3726 2220 2167 * 4331 161 79 10 chr5 44179840 44181279 -155448871 - MER57B-int LTR ERV1 -2904 1976 288 * 4413 134 21 8 chr5 44181273 44181939 -155448211 - MER57B-int LTR ERV1 -6862 675 1 2774 105 26 26 chr5 44181943 44182372 -155447778 - MER57B LTR ERV1 -4 430 2 246 95 0 0 chr5 44182468 44182510 -155447640 + (TGGA)n Simple_repeat Simple_repeat 2 43 0 6344 152 53 9 chr5 44183640 44184819 -155445331 - Tigger3b DNA MER2_type 0 1231 1 704 212 92 48 chr5 44185423 44185715 -155444435 + L1MDa LINE L1 1295 1599 -4941 635 259 0 0 chr5 44185717 44185848 -155444302 + FLAM_A SINE Alu 1 131 -2 35936 98 11 9 chr5 44185856 44191996 -155438154 + L1PA6 LINE L1 3 6153 -1 3031 133 14 9 chr5 44191992 44192574 -155437576 + L1PB1 LINE L1 5098 5792 -359 * 182 36 0 36 chr5 44192574 44192602 -155437548 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 3031 133 14 9 chr5 44192602 44192964 -155437186 + L1PB1 LINE L1 5792 6151 0 1036 214 36 16 chr5 44192965 44193217 -155436933 + L1M4 LINE L1 4692 4948 -1198 429 292 34 6 chr5 44193234 44193412 -155436738 + L1M4 LINE L1 5084 5266 -880 3379 240 45 13 chr5 44193417 44194472 -155435678 + L1M4 LINE L1 3067 4154 -1992 806 144 11 249 chr5 44194445 44194827 -155435323 + L1MB8 LINE L1 5643 5933 -245 * 302 336 42 21 chr5 44195752 44195895 -155434255 - L2 LINE L2 -1 3312 3167 377 295 146 81 chr5 44197455 44197824 -155432326 - L2 LINE L2 0 3272 2921 327 93 27 53 chr5 44197832 44197907 -155432243 + (GGAA)n Simple_repeat Simple_repeat 3 75 0 7377 252 28 43 chr5 44197926 44200350 -155429800 + L1MA4A LINE L1 2 2388 -4461 9888 185 68 22 chr5 44200367 44202033 -155428117 + L1MA4A LINE L1 3308 5151 -1821 1493 190 17 48 chr5 44202033 44202322 -155427828 + AluJo SINE Alu 1 280 -32 9888 185 68 22 chr5 44202322 44203441 -155426709 + L1MA4A LINE L1 5151 6217 -755 1242 141 141 0 chr5 44203448 44203696 -155426454 + L1MA4A LINE L1 6341 6623 -382 6687 175 101 35 chr5 44203983 44205554 -155424596 + MER52A LTR ERV1 1 1753 -2 279 296 23 0 chr5 44205613 44205701 -155424449 - MIR SINE MIR -12 250 161 4215 98 27 27 chr5 44205715 44206350 -155423800 - MER41B LTR ERV1 0 635 1 299 167 0 0 chr5 44206676 44206724 -155423426 + Alu SINE Alu 234 281 -21 239 220 34 17 chr5 44207426 44207485 -155422665 + GA-rich Low_complexity Low_complexity 4 63 0 328 350 64 9 chr5 44207611 44207831 -155422319 - MIR SINE MIR -1 261 30 2339 97 0 7 chr5 44207981 44208281 -155421869 - AluSg SINE Alu -12 298 1 315 71 0 0 chr5 44208345 44208387 -155421763 + (CA)n Simple_repeat Simple_repeat 1 42 0 413 307 118 64 chr5 44209731 44210197 -155419953 + L1MEd LINE L1 478 968 -5237 1319 274 148 58 chr5 44210257 44211587 -155418563 + HAL1 LINE L1 15 1464 -1043 290 278 37 9 chr5 44212025 44212133 -155418017 + MER114 LTR ERV 2 112 -536 204 289 0 19 chr5 44212200 44212252 -155417898 - L2 LINE L2 -2 3311 3261 2242 94 3 0 chr5 44212300 44212587 -155417563 + AluSx SINE Alu 24 311 -1 2766 133 4 20 chr5 44212594 44213046 -155417104 - L1PA15 LINE L1 -16 6149 5705 7737 171 26 13 chr5 44213046 44213801 -155416349 + ERVL-D LTR ERVL 2223 3006 -2758 2465 122 89 0 chr5 44213801 44214194 -155415956 + MSTA LTR MaLR 1 428 0 7737 171 26 13 chr5 44214194 44214885 -155415265 + ERVL-D LTR ERVL 3006 3687 -2077 7222 172 28 15 chr5 44214874 44216239 -155413911 + ERVL-D LTR ERVL 4374 5755 -9 * 1021 174 11 0 chr5 44216241 44216425 -155413725 + MLT2D LTR ERVL 1 186 -228 411 68 0 0 chr5 44216440 44216499 -155413651 + (TCTA)n Simple_repeat Simple_repeat 1 59 0 331 102 0 0 chr5 44216500 44216549 -155413601 + MLT2C2 LTR ERVL 413 461 -3 278 310 40 10 chr5 44216563 44216663 -155413487 + L1ME3A LINE L1 5963 6065 -105 279 271 75 28 chr5 44216769 44216983 -155413167 + L1MEd LINE L1 1051 1274 -4931 814 219 71 30 chr5 44217059 44217234 -155412916 - MSTD LTR MaLR -2 394 228 2399 137 39 0 chr5 44217234 44217593 -155412557 - THE1C LTR MaLR 0 375 3 814 219 71 30 chr5 44217593 44217762 -155412388 - MSTD LTR MaLR -168 228 1 2840 235 77 21 chr5 44217767 44218495 -155411655 - MSTD-int LTR MaLR -6 1729 961 * 3655 197 18 12 chr5 44218473 44219243 -155410907 - MSTD-int LTR MaLR -959 776 2 958 204 65 27 chr5 44219244 44219581 -155410569 - MSTD LTR MaLR 0 396 6 4879 179 13 14 chr5 44219675 44221015 -155409135 + L1PA16 LINE L1 4221 5554 -612 2295 144 52 25 chr5 44221016 44221459 -155408691 + L1PA16 LINE L1 5710 6164 -2 304 293 92 24 chr5 44221460 44221624 -155408526 + L1MEd LINE L1 1546 1720 -4676 1695 181 48 0 chr5 44222560 44222735 -155407415 - AluJo SINE Alu -3 309 113 297 0 0 0 chr5 44222735 44222768 -155407382 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1695 181 48 0 chr5 44222768 44222885 -155407265 - AluJo SINE Alu -199 113 3 462 277 25 43 chr5 44223100 44223335 -155406815 - L1MDa LINE L1 -2045 4495 4265 332 304 64 8 chr5 44223520 44223645 -155406505 - L1MDa LINE L1 -2381 4159 4028 403 268 25 46 chr5 44223723 44223962 -155406188 - L1MDa LINE L1 -3625 2915 2682 328 293 41 34 chr5 44223971 44224118 -155406032 - L1MDa LINE L1 -3942 2598 2451 313 257 89 10 chr5 44224111 44224212 -155405938 - L1MDa LINE L1 -4941 1589 1481 * 510 170 11 0 chr5 44224287 44224381 -155405769 - L1MDa LINE L1 -5987 543 449 233 348 22 22 chr5 44224419 44224511 -155405639 + MIR SINE MIR 41 132 -76 2146 115 0 3 chr5 44224582 44224878 -155405272 - AluSc SINE Alu -2 307 13 199 227 134 62 chr5 44224994 44225091 -155405059 + MIR SINE MIR 34 137 -71 588 248 96 54 chr5 44225618 44225932 -155404218 - LTR16A1 LTR ERVL -130 327 1 22 0 0 0 chr5 44226786 44226808 -155403342 + AT_rich Low_complexity Low_complexity 1 22 0 760 168 0 8 chr5 44226808 44226933 -155403217 - AluJb SINE Alu -188 124 1 504 332 25 25 chr5 44227108 44227346 -155402804 - MIR SINE MIR 0 262 25 228 86 0 0 chr5 44228254 44228289 -155401861 + (A)n Simple_repeat Simple_repeat 1 35 0 400 100 143 0 chr5 44228436 44228506 -155401644 - MADE1 DNA Mariner 0 80 1 298 302 149 18 chr5 44228754 44228976 -155401174 + MER102b DNA MER1_type 73 323 -18 1561 163 33 118 chr5 44229739 44230138 -155400012 - MLT1A1 LTR MaLR 0 365 1 218 269 215 0 chr5 44230405 44230498 -155399652 - L2 LINE L2 0 3272 3160 493 225 246 0 chr5 44230608 44230746 -155399404 - MER5A DNA MER1_type 0 189 18 218 293 17 0 chr5 44231474 44231532 -155398618 - MER5B DNA MER1_type -46 132 74 1324 191 71 76 chr5 44233288 44233655 -155396495 + MLT1A1 LTR MaLR 1 365 0 198 325 26 44 chr5 44233833 44233947 -155396203 + MIR SINE MIR 99 210 -52 1055 173 66 0 chr5 44234086 44234283 -155395867 + MER6B DNA MER2_type 1 210 0 422 316 65 36 chr5 44236335 44236503 -155393647 - MER5A DNA MER1_type -5 184 12 839 199 0 75 chr5 44236542 44236728 -155393422 + MER5A DNA MER1_type 3 174 -15 1258 172 52 26 chr5 44236737 44237045 -155393105 + MER33 DNA MER1_type 9 324 0 951 218 69 0 chr5 44237075 44237277 -155392873 + MER20 DNA MER1_type 1 216 -3 465 243 24 89 chr5 44237295 44237464 -155392686 + MER5B DNA MER1_type 20 177 -1 278 211 18 0 chr5 44237532 44237589 -155392561 - MER5A DNA MER1_type -108 81 24 2320 91 17 0 chr5 44237985 44238283 -155391867 + AluSg SINE Alu 1 303 -7 295 275 86 94 chr5 44238618 44238851 -155391299 + L2 LINE L2 3079 3309 -4 323 345 30 12 chr5 44239042 44239207 -155390943 - L2 LINE L2 -420 2894 2727 352 311 155 20 chr5 44239407 44239555 -155390595 + MER5A DNA MER1_type 22 189 0 869 273 34 72 chr5 44239987 44240401 -155389749 + L2 LINE L2 2911 3308 -5 590 304 109 9 chr5 44240424 44240644 -155389506 + MIR SINE MIR 2 243 -19 405 309 71 36 chr5 44240844 44241012 -155389138 - MIR3 SINE MIR -11 197 24 358 328 86 40 chr5 44241078 44241252 -155388898 - MIR3 SINE MIR -11 197 16 448 275 65 30 chr5 44243099 44243299 -155386851 + MIR SINE MIR 1 207 -55 346 304 12 71 chr5 44244896 44245064 -155385086 + MER5A DNA MER1_type 17 174 -15 205 276 146 60 chr5 44245056 44245241 -155384909 + L3b LINE CR1 1149 1349 -234 * 207 0 0 0 chr5 44245774 44245797 -155384353 + (A)n Simple_repeat Simple_repeat 1 23 0 882 179 92 5 chr5 44245972 44246167 -155383983 - MER20 DNA MER1_type -1 218 7 575 304 119 5 chr5 44246625 44246826 -155383324 + MIR SINE MIR 25 248 -14 283 301 57 24 chr5 44247403 44247526 -155382624 + L2 LINE L2 2941 3067 -205 309 317 50 17 chr5 44247698 44247818 -155382332 + L2 LINE L2 3189 3312 -1 22 56 0 0 chr5 44248018 44248054 -155382096 + AT_rich Low_complexity Low_complexity 1 36 0 258 294 65 11 chr5 44248077 44248169 -155381981 - MIR SINE MIR -48 214 118 305 137 0 0 chr5 44248645 44248696 -155381454 + MADE1 DNA Mariner 30 80 0 246 81 0 0 chr5 44249155 44249192 -155380958 + (TG)n Simple_repeat Simple_repeat 2 38 0 320 296 25 54 chr5 44249245 44249559 -155380591 - L1ME4a LINE L1 -218 5903 5599 1564 173 30 12 chr5 44249779 44250144 -155380006 + MER47B DNA MER2_type 1 418 0 609 304 59 32 chr5 44250144 44250252 -155379898 - LTR16C LTR ERVL -56 435 331 433 278 9 17 chr5 44250252 44250367 -155379783 + MER81 DNA DNA 1 114 0 609 304 59 32 chr5 44250367 44250596 -155379554 - LTR16C LTR ERVL -160 331 89 236 220 20 50 chr5 44251059 44251159 -155378991 + (TA)n Simple_repeat Simple_repeat 2 98 0 1040 99 0 0 chr5 44251206 44251358 -155378792 - L1MA4 LINE L1 -69 6231 6080 252 310 28 0 chr5 44252108 44252179 -155377971 - MIR SINE MIR -55 153 81 333 283 0 20 chr5 44252683 44252782 -155377368 - L1MC4 LINE L1 -1334 6708 6612 300 294 11 11 chr5 44252703 44252795 -155377355 + L1MC4 LINE L1 6612 6703 -1339 * 231 36 0 0 chr5 44253447 44253475 -155376675 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 1330 134 222 57 chr5 44253811 44253962 -155376188 + MSTA LTR MaLR 1 126 -302 2021 118 0 4 chr5 44253962 44254284 -155375866 - AluSg SINE Alu 0 321 1 1330 134 222 57 chr5 44254284 44254482 -155375668 + MSTA LTR MaLR 126 409 -19 1941 166 3 0 chr5 44257690 44257985 -155372165 + AluJb SINE Alu 1 296 -16 1683 226 100 36 chr5 44258367 44258889 -155371261 + MLT1H1 LTR MaLR 1 555 0 256 363 44 0 chr5 44259133 44259224 -155370926 - L2 LINE L2 -9 3263 3169 1263 228 100 6 chr5 44259289 44259600 -155370550 - MER58B DNA MER1_type 0 341 2 2100 182 37 47 chr5 44261691 44262201 -155367949 + MLT1D LTR MaLR 1 505 0 694 181 0 55 chr5 44262431 44262558 -155367592 + FLAM_A SINE Alu 1 120 -13 197 0 0 67 chr5 44262565 44262595 -155367555 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 738 261 31 15 chr5 44262771 44262966 -155367184 + MIR SINE MIR 40 237 -25 209 309 118 62 chr5 44263278 44263456 -155366694 + MER5A DNA MER1_type 2 189 0 218 313 0 60 chr5 44264353 44264436 -155365714 - MER5A DNA MER1_type -105 84 7 288 0 0 0 chr5 44264953 44264985 -155365165 + (TGG)n Simple_repeat Simple_repeat 3 34 0 525 309 121 53 chr5 44265469 44265883 -155364267 - L1ME4a LINE L1 -218 5903 5462 322 300 50 10 chr5 44266142 44266242 -155363908 - MIR SINE MIR 0 262 159 1616 240 62 5 chr5 44266247 44266684 -155363466 + MLT1C LTR MaLR 6 467 0 354 254 144 0 chr5 44266707 44266823 -155363327 - MIR SINE MIR -72 136 4 2185 166 48 52 chr5 44266840 44267322 -155362828 - LTR26B LTR ERV1 0 531 52 35463 91 12 7 chr5 44267324 44273429 -155356721 - L1PA6 LINE L1 -7 6147 11 431 310 39 19 chr5 44273476 44273631 -155356519 + MIR3 SINE MIR 36 193 -15 267 288 71 65 chr5 44274135 44274305 -155355845 - MIR SINE MIR 0 262 92 225 229 205 12 chr5 44274296 44274379 -155355771 - L2 LINE L2 0 3272 3174 * 3593 110 8 4 chr5 44275345 44275854 -155354296 + MER9 LTR ERVK 1 511 0 621 40 0 0 chr5 44276478 44276554 -155353596 + (GGAA)n Simple_repeat Simple_repeat 3 78 0 1454 168 42 54 chr5 44277014 44277348 -155352802 + MER2 DNA MER2_type 1 330 -15 1814 150 0 41 chr5 44277373 44277667 -155352483 - AluJo SINE Alu -30 282 1 373 317 126 13 chr5 44278185 44278415 -155351735 - MIR SINE MIR -5 257 2 207 328 206 13 chr5 44278759 44278997 -155351153 + L2 LINE L2 2682 2965 -349 189 107 0 0 chr5 44279461 44279489 -155350661 + (CA)n Simple_repeat Simple_repeat 1 28 0 265 261 269 8 chr5 44282468 44282598 -155347552 + L3 LINE CR1 1250 1413 -164 333 315 0 0 chr5 44334185 44334277 -155295873 - L1MC4 LINE L1 -1337 6705 6614 * 337 261 0 22 chr5 44334199 44334291 -155295859 + L1MC4 LINE L1 6614 6703 -1339 7543 186 11 13 chr5 44334293 44336280 -155293870 - L1P5 LINE L1 -564 5587 3611 185 423 32 0 chr5 44337592 44337715 -155292435 - L3 LINE CR1 -23 1554 1428 284 197 0 84 chr5 44337743 44337759 -155292391 + MIR SINE MIR 195 211 -51 2078 117 71 31 chr5 44337759 44338109 -155292041 - THE1B LTR MaLR 0 364 1 284 197 0 84 chr5 44338109 44338163 -155291987 + MIR SINE MIR 211 259 -3 1820 51 21 0 chr5 44339267 44339504 -155290646 - L1PB1 LINE L1 0 6151 5910 1729 169 3 7 chr5 44340691 44340975 -155289175 + AluJb SINE Alu 1 283 -29 2436 126 17 0 chr5 44341559 44341917 -155288233 + THE1B LTR MaLR 1 364 0 455 175 25 0 chr5 44342021 44342101 -155288049 + L1PB4 LINE L1 6057 6138 -18 12171 57 2 0 chr5 44342186 44344506 -155285644 - L1PA6 LINE L1 -6 6148 3816 695 191 37 56 chr5 44344606 44344768 -155285382 - MIR SINE MIR -10 252 94 553 291 133 40 chr5 44344820 44345143 -155285007 - L3 LINE CR1 -7 1570 1218 189 268 54 0 chr5 44345164 44345220 -155284930 + L2 LINE L2 2695 2753 -561 809 238 133 47 chr5 44345271 44345633 -155284517 - MLT1J1 LTR MaLR -47 399 7 215 390 112 4 chr5 44345640 44345889 -155284261 + L2 LINE L2 2821 3096 -176 29 47 0 0 chr5 44345919 44345962 -155284188 + AT_rich Low_complexity Low_complexity 1 43 0 208 333 83 49 chr5 44346043 44346187 -155283963 + L2 LINE L2 2598 2746 -568 512 315 0 14 chr5 44346213 44346356 -155283794 - MER5A DNA MER1_type -48 141 1 221 374 26 0 chr5 44346458 44346573 -155283577 + L2 LINE L2 2933 3050 -222 4836 184 14 29 chr5 44346882 44347871 -155282279 + MER21-int LTR ERV1 2912 3885 -306 7860 106 15 0 chr5 44347971 44349130 -155281020 - L1P3 LINE L1 -5285 1176 1 23 0 0 0 chr5 44349504 44349527 -155280623 + AT_rich Low_complexity Low_complexity 1 23 0 4075 93 17 21 chr5 44349528 44349881 -155280269 - L1PB1 LINE L1 -15 6136 5786 2239 115 0 31 chr5 44349881 44350202 -155279948 - AluSq SINE Alu -2 311 1 4075 93 17 21 chr5 44350202 44350452 -155279698 - L1PB1 LINE L1 -365 5786 5536 181 211 0 96 chr5 44350858 44350910 -155279240 + L2 LINE L2 3221 3267 -5 204 274 119 36 chr5 44351114 44351198 -155278952 - MER5A DNA MER1_type -6 183 93 * 924 196 82 14 chr5 44351139 44351358 -155278792 + MIR SINE MIR 8 241 -21 298 379 8 0 chr5 44352027 44352151 -155277999 + MIR3 SINE MIR 51 175 -33 288 333 28 9 chr5 44352710 44352818 -155277332 + MIR3 SINE MIR 68 177 -31 838 18 0 0 chr5 44353153 44353262 -155276888 - L1P LINE L1 -752 5403 5295 * 3835 11 0 2 chr5 44353260 44353697 -155276453 + L1PA3 LINE L1 5395 5830 -325 1916 181 40 32 chr5 44353949 44354490 -155275660 + MLT2A2 LTR ERVL 1 553 -1 416 289 91 50 chr5 44355674 44355894 -155274256 - MLT1L LTR MaLR 0 615 406 2176 103 0 17 chr5 44355894 44356194 -155273956 + AluSx SINE Alu 1 295 -17 416 289 91 50 chr5 44356194 44356378 -155273772 - MLT1L LTR MaLR -209 406 120 252 59 0 0 chr5 44356552 44356586 -155273564 + (CA)n Simple_repeat Simple_repeat 2 35 0 256 300 0 0 chr5 44357635 44357695 -155272455 + MIR SINE MIR 90 149 -59 2194 105 3 0 chr5 44357971 44358266 -155271884 + AluSg1 SINE Alu 1 296 -13 202 232 0 36 chr5 44358529 44358585 -155271565 + (TCTCTG)n Simple_repeat Simple_repeat 6 59 0 225 151 38 0 chr5 44359152 44359205 -155270945 + (TATAG)n Simple_repeat Simple_repeat 2 56 0 213 304 142 20 chr5 44359850 44359998 -155270152 - L2 LINE L2 -4 3309 3144 835 32 16 58 chr5 44360356 44360544 -155269606 + (TA)n Simple_repeat Simple_repeat 1 180 0 2935 60 21 8 chr5 44360544 44360928 -155269222 - MLT2A1 LTR ERVL -55 389 1 664 105 11 0 chr5 44360928 44361023 -155269127 + MER21A LTR ERV1 481 576 -355 2347 272 77 52 chr5 44361070 44362233 -155267917 + L1PBa LINE L1 412 1603 -5260 1434 149 23 0 chr5 44362233 44362454 -155267696 + AluJb SINE Alu 81 306 -6 2175 128 8 14 chr5 44362454 44362844 -155267306 + L1PB3 LINE L1 692 1079 -5125 7421 202 37 76 chr5 44362860 44364266 -155265884 + L1PB3 LINE L1 3169 4437 -1778 384 22 0 0 chr5 44364266 44364311 -155265839 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 7421 202 37 76 chr5 44364311 44365264 -155264886 + L1PB3 LINE L1 4437 5426 -789 5102 134 10 4 chr5 44365536 44366343 -155263807 + L1PB3 LINE L1 5395 6206 -5 554 148 20 10 chr5 44366719 44366820 -155263330 + MLT1F1 LTR MaLR 1 102 -465 3312 20 2 8 chr5 44366922 44367315 -155262835 + L1PA3 LINE L1 5765 6155 0 579 281 51 23 chr5 44367630 44367847 -155262303 - L2 LINE L2 0 3313 3091 452 312 51 13 chr5 44367873 44368030 -155262120 - MIR3 SINE MIR -39 169 7 228 122 0 0 chr5 44368762 44368803 -155261347 + (GA)n Simple_repeat Simple_repeat 1 41 0 2480 147 19 23 chr5 44369745 44370173 -155259977 - MSTB LTR MaLR 0 426 1 497 268 115 13 chr5 44371040 44371197 -155258953 + MER5B DNA MER1_type 1 173 -5 210 37 0 0 chr5 44371360 44371387 -155258763 + (TTA)n Simple_repeat Simple_repeat 2 28 0 248 331 91 19 chr5 44371606 44371760 -155258390 - L2 LINE L2 -817 2497 2333 508 300 83 0 chr5 44372053 44372233 -155257917 + L2 LINE L2 3119 3313 0 522 249 140 64 chr5 44372246 44372427 -155257723 - MIR SINE MIR -63 145 1 233 258 0 65 chr5 44373061 44373123 -155257027 - MIR SINE MIR -56 152 95 380 274 35 0 chr5 44374324 44374437 -155255713 + MER94 DNA DNA 1 117 -17 21 0 0 0 chr5 44374907 44374928 -155255222 + AT_rich Low_complexity Low_complexity 1 21 0 225 273 26 26 chr5 44375002 44375079 -155255071 + L2 LINE L2 3154 3230 -42 498 108 0 0 chr5 44375098 44375172 -155254978 + (TA)n Simple_repeat Simple_repeat 1 74 0 968 198 0 135 chr5 44375185 44375504 -155254646 - AluJo SINE Alu -33 279 4 492 62 0 0 chr5 44375695 44375759 -155254391 + (TA)n Simple_repeat Simple_repeat 1 64 0 1661 123 0 126 chr5 44375760 44376093 -155254057 - AluJb SINE Alu -21 291 1 235 244 78 33 chr5 44376355 44376445 -155253705 - MIR SINE MIR -123 139 46 576 256 91 22 chr5 44377226 44377456 -155252694 + MER112 DNA MER1_type 2 247 -13 1725 237 64 51 chr5 44377716 44378416 -155251734 + HsTC2a DNA Tc2 4 712 -32 2842 223 78 9 chr5 44378419 44379153 -155250997 + L1ME1 LINE L1 5397 6334 0 2189 123 0 0 chr5 44379162 44379463 -155250687 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr5 44379826 44379848 -155250302 + AT_rich Low_complexity Low_complexity 1 22 0 400 240 77 29 chr5 44380175 44380279 -155249871 + MIR SINE MIR 78 186 -76 22 0 0 0 chr5 44380580 44380602 -155249548 + AT_rich Low_complexity Low_complexity 1 22 0 737 76 0 0 chr5 44381607 44381755 -155248395 + L1PA8 LINE L1 6066 6213 0 472 226 161 19 chr5 44383688 44383843 -155246307 + MER5B DNA MER1_type 2 178 0 2102 114 3 3 chr5 44384106 44384403 -155245747 - AluJb SINE Alu -13 299 3 298 260 0 14 chr5 44384853 44384926 -155245224 + L2 LINE L2 3242 3313 0 2115 146 30 30 chr5 44385669 44386033 -155244117 + THE1B LTR MaLR 1 364 0 342 355 36 68 chr5 44386901 44387152 -155242998 + L2 LINE L2 3001 3243 -29 406 326 14 14 chr5 44387274 44387412 -155242738 - MIR3 SINE MIR -60 148 11 1663 167 0 20 chr5 44387982 44388303 -155241847 + AluSx SINE Alu 1 315 0 21 0 0 0 chr5 44388927 44388948 -155241202 + AT_rich Low_complexity Low_complexity 1 21 0 1848 116 8 0 chr5 44389694 44389944 -155240206 - AluSg SINE Alu -58 252 1 183 156 0 0 chr5 44390259 44390291 -155239859 + (CA)n Simple_repeat Simple_repeat 1 32 0 1519 186 14 26 chr5 44391139 44391488 -155238662 - L1MA10 LINE L1 -3 6331 5987 24 0 0 0 chr5 44391619 44391643 -155238507 + AT_rich Low_complexity Low_complexity 1 24 0 3091 45 3 0 chr5 44391643 44392023 -155238127 - L1PA4 LINE L1 -3 6152 5772 18915 37 2 0 chr5 44392023 44394413 -155235737 + L1P2 LINE L1 3072 5466 -689 24 0 0 0 chr5 44394413 44394437 -155235713 + AT_rich Low_complexity Low_complexity 1 24 0 2472 8 0 0 chr5 44394437 44394702 -155235448 + AluYa5 SINE Alu 36 300 -11 1454 146 40 4 chr5 44395046 44395293 -155234857 - Tigger2 DNA MER2_type 0 2718 2463 1936 105 105 0 chr5 44395338 44395605 -155234545 - AluSg SINE Alu -13 297 3 4136 158 35 4 chr5 44395611 44396345 -155233805 - Tigger2 DNA MER2_type -1946 772 16 1690 161 61 26 chr5 44396342 44396684 -155233466 - MLT1B LTR MaLR -9 381 28 * 10427 99 9 3 chr5 44396758 44401763 -155228387 - L1PA7 LINE L1 -1 6153 957 288 0 0 0 chr5 44402601 44402633 -155227517 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 513 130 0 0 chr5 44402643 44402712 -155227438 - FRAM SINE Alu -39 137 69 1969 144 7 3 chr5 44402734 44403039 -155227111 + AluSx SINE Alu 1 306 -6 272 389 70 13 chr5 44403730 44403959 -155226191 + MIR SINE MIR 8 249 -13 2177 117 3 3 chr5 44404139 44404437 -155225713 - AluSx SINE Alu -14 298 1 21 57 0 0 chr5 44404906 44404941 -155225209 + AT_rich Low_complexity Low_complexity 1 35 0 2715 73 6 3 chr5 44405071 44405425 -155224725 + THE1A LTR MaLR 1 355 0 22 35 0 0 chr5 44406206 44406235 -155223915 + AT_rich Low_complexity Low_complexity 1 29 0 581 262 175 55 chr5 44406278 44406770 -155223380 - MLT1H1 LTR MaLR 0 555 5 213 328 0 0 chr5 44406976 44407034 -155223116 - MIR3 SINE MIR -3 205 148 252 0 0 0 chr5 44409548 44409576 -155220574 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 743 174 90 2 chr5 44409709 44409994 -155220156 + MLT1A2 LTR MaLR 5 374 0 2247 286 130 24 chr5 44410445 44411794 -155218356 + L2 LINE L2 1773 3279 -34 1641 195 26 3 chr5 44412154 44412456 -155217694 - AluJb SINE Alu -3 309 1 446 278 74 6 chr5 44412473 44412635 -155217515 + Charlie8 DNA MER1_type 73 245 -2172 329 209 15 0 chr5 44412711 44412778 -155217372 + Charlie8 DNA MER1_type 1349 1416 -1001 515 295 27 0 chr5 44413024 44413173 -155216977 + MIR SINE MIR 20 172 -90 916 66 0 0 chr5 44413318 44413439 -155216711 + L1PA3 LINE L1 6035 6155 0 1974 138 28 0 chr5 44413633 44413922 -155216228 + AluSx SINE Alu 1 297 -15 282 408 85 23 chr5 44413948 44414468 -155215682 + L2 LINE L2 2425 2976 -338 184 279 128 35 chr5 44414625 44414711 -155215439 + MIR3 SINE MIR 9 102 -106 2199 122 0 7 chr5 44414959 44415263 -155214887 - AluSx SINE Alu -9 303 2 2036 135 0 0 chr5 44416106 44416394 -155213756 - AluSx SINE Alu -24 288 1 21 89 0 0 chr5 44416641 44416697 -155213453 + AT_rich Low_complexity Low_complexity 1 56 0 5834 104 36 5 chr5 44416884 44418100 -155212050 + L1PA11 LINE L1 4922 6174 0 300 221 44 0 chr5 44418261 44418329 -155211821 + L2 LINE L2 3242 3312 -1 2391 82 0 0 chr5 44418777 44419071 -155211079 + AluY SINE Alu 1 294 -17 730 236 169 0 chr5 44420160 44420355 -155209795 - MIR SINE MIR -5 257 30 258 32 0 0 chr5 44420520 44420551 -155209599 + (TATG)n Simple_repeat Simple_repeat 1 31 0 295 194 49 70 chr5 44420581 44420699 -155209451 + MLT1D LTR MaLR 5 107 -406 40838 34 21 1 chr5 44420713 44426744 -155203406 - L1PA2 LINE L1 -2 6153 1 1372 212 40 50 chr5 44426768 44427165 -155202985 + MLT1D LTR MaLR 113 505 0 2078 154 0 0 chr5 44427905 44428211 -155201939 + AluSx SINE Alu 1 306 -6 1052 150 5 10 chr5 44428230 44428430 -155201720 + L1PBa LINE L1 2 200 -6663 9727 144 46 8 chr5 44428432 44430557 -155199593 + L1PBa LINE L1 636 3068 -3794 2321 104 0 0 chr5 44430557 44430855 -155199295 + AluSg SINE Alu 1 298 -12 9727 144 46 8 chr5 44430855 44432156 -155197994 + L1PBa LINE L1 3068 4318 -2544 19249 122 24 22 chr5 44432258 44435579 -155194571 - L1P LINE L1 -2809 3337 11 1595 241 69 33 chr5 44436710 44437308 -155192842 + L1ME3A LINE L1 5540 6158 -12 944 195 126 58 chr5 44437386 44437663 -155192487 + AluJo SINE Alu 1 296 -6 351 290 0 21 chr5 44438816 44438909 -155191241 - MIR SINE MIR -102 106 16 390 277 54 0 chr5 44439375 44439505 -155190645 - L2 LINE L2 -1 3312 3176 998 189 16 0 chr5 44439719 44439904 -155190246 + MER5A DNA MER1_type 1 188 -1 323 320 21 72 chr5 44440788 44440982 -155189168 + L1ME LINE L1 5577 5760 -361 338 242 161 48 chr5 44442749 44442935 -155187215 + MIR SINE MIR 44 250 -12 291 269 0 0 chr5 44444403 44444481 -155185669 + MIR SINE MIR 185 262 0 24 77 0 0 chr5 44444564 44444616 -155185534 + AT_rich Low_complexity Low_complexity 1 52 0 227 273 105 17 chr5 44445591 44445763 -155184387 - L1ME4a LINE L1 -167 5954 5768 293 304 27 14 chr5 44446009 44446229 -155183921 + L1ME4a LINE L1 5556 5778 -343 315 308 109 6 chr5 44446311 44446467 -155183683 + L1ME4a LINE L1 5922 6093 -28 269 318 23 39 chr5 44446587 44446716 -155183434 - L2 LINE L2 -222 3050 2924 193 347 104 18 chr5 44446753 44446921 -155183229 - L2 LINE L2 -1342 1972 1820 1641 79 0 0 chr5 44446921 44447136 -155183014 + L1PA8 LINE L1 5955 6169 -3 193 347 104 18 chr5 44447136 44447304 -155182846 - L2 LINE L2 -1494 1820 1607 3837 178 17 20 chr5 44448663 44449523 -155180627 - L1MA8 LINE L1 -863 5283 4426 3798 160 74 13 chr5 44449521 44450358 -155179792 + L1MA8 LINE L1 5282 6169 -122 * 5433 130 43 6 chr5 44450544 44451655 -155178495 + L1MA8 LINE L1 5130 6284 -7 613 242 21 155 chr5 44451863 44452251 -155177899 + L3 LINE CR1 1108 1443 -134 1525 147 11 29 chr5 44452368 44452647 -155177503 - L1MC1 LINE L1 -2 6331 6058 360 316 22 29 chr5 44452650 44452786 -155177364 + MER5A DNA MER1_type 51 185 -4 215 361 0 0 chr5 44452778 44452839 -155177311 + L3 LINE CR1 1516 1576 -1 * 753 253 6 11 chr5 44452939 44453121 -155177029 - MIR SINE MIR -70 192 12 695 275 77 32 chr5 44453568 44453815 -155176335 + MIR SINE MIR 3 260 -2 23 0 0 0 chr5 44454601 44454624 -155175526 + AT_rich Low_complexity Low_complexity 1 23 0 1236 276 74 19 chr5 44456096 44456664 -155173486 + L1ME3A LINE L1 5309 5907 -263 2102 127 3 22 chr5 44456849 44457164 -155172986 + AluSx SINE Alu 1 309 -3 5671 114 3 0 chr5 44457870 44458548 -155171602 - L1PA15 LINE L1 0 6165 5490 189 0 0 0 chr5 44458548 44458569 -155171581 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5671 114 3 0 chr5 44458569 44458592 -155171558 - L1PA15 LINE L1 -675 5490 5469 1655 95 0 5 chr5 44458592 44458802 -155171348 - AluSq SINE Alu -99 214 6 5671 114 3 0 chr5 44458802 44459233 -155170917 - L1PA15 LINE L1 -696 5469 5058 2897 202 33 5 chr5 44459238 44459883 -155170267 - L1PA15 LINE L1 -1336 4810 4148 2025 110 3 17 chr5 44459967 44460258 -155169892 - AluSx SINE Alu -15 297 11 1664 101 0 22 chr5 44460549 44460777 -155169373 + AluSg/x SINE Alu 84 306 -6 1402 321 144 21 chr5 44462072 44462178 -155167972 + L2 LINE L2 189 281 -3033 1856 184 114 26 chr5 44462178 44462607 -155167543 + MLT1C LTR MaLR 1 467 0 1402 321 144 21 chr5 44462607 44463432 -155166718 + L2 LINE L2 281 1234 -2080 3259 299 157 15 chr5 44463445 44465136 -155165014 + L2 LINE L2 579 2509 -805 510 115 0 13 chr5 44466788 44466866 -155163284 - Tigger2 DNA MER2_type -2641 77 1 392 250 0 0 chr5 44466868 44466952 -155163198 - MIR SINE MIR -67 195 112 * 472 216 31 0 chr5 44466951 44467048 -155163102 + MER5A DNA MER1_type 13 112 -77 348 24 0 0 chr5 44467295 44467336 -155162814 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 357 359 0 18 chr5 44467394 44467561 -155162589 - MIR3 SINE MIR 0 208 45 1173 193 103 53 chr5 44468431 44468814 -155161336 + MLT2B1 LTR ERVL 1 363 -157 231 36 0 0 chr5 44468814 44468842 -155161308 + (TG)n Simple_repeat Simple_repeat 1 28 0 501 17 0 0 chr5 44468842 44468900 -155161250 + (TA)n Simple_repeat Simple_repeat 2 59 0 1173 193 103 53 chr5 44468900 44468952 -155161198 + MLT2B1 LTR ERVL 362 503 -17 610 271 111 69 chr5 44469795 44470334 -155159816 + L1M4 LINE L1 2740 3301 -2845 2270 75 0 50 chr5 44470516 44470834 -155159316 + AluY SINE Alu 1 302 -9 2748 56 0 0 chr5 44472379 44472721 -155157429 + L1PA5 LINE L1 5809 6150 -4 222 271 51 93 chr5 44472974 44473092 -155157058 - L2 LINE L2 -10 3303 3191 182 232 53 42 chr5 44474054 44474149 -155156001 + L2 LINE L2 1633 1728 -1586 422 253 0 10 chr5 44474434 44474533 -155155617 + Charlie2b DNA MER1_type 1041 1138 -1644 1146 225 106 26 chr5 44474606 44475250 -155154900 + Charlie2b DNA MER1_type 2080 2774 -8 289 279 51 46 chr5 44476148 44476300 -155153850 + LTR16A1 LTR ERVL 328 456 -1 259 372 54 27 chr5 44477035 44477293 -155152857 + HERV16 LTR ERVL 711 975 -4021 716 40 0 40 chr5 44477485 44477585 -155152565 + L1PA10 LINE L1 6069 6164 -4 2393 316 58 37 chr5 44478004 44479259 -155150891 + HERV16 LTR ERVL 3523 4804 -960 301 176 0 0 chr5 44479814 44479865 -155150285 - L1MC4 LINE L1 -1337 6705 6655 303 194 60 0 chr5 44479866 44479933 -155150217 - L1ME3 LINE L1 -11 6151 6081 426 352 87 5 chr5 44480050 44480269 -155149881 + L2 LINE L2 2570 2806 -508 248 360 118 55 chr5 44480285 44480574 -155149576 + L2 LINE L2 2966 3272 0 875 163 0 0 chr5 44480644 44480785 -155149365 + AluJb SINE Alu 1 141 -171 214 83 0 42 chr5 44480802 44480850 -155149300 + (TAAAAA)n Simple_repeat Simple_repeat 3 48 0 421 238 54 27 chr5 44482551 44482698 -155147452 - MIR SINE MIR -66 196 46 483 292 35 12 chr5 44482729 44482900 -155147250 + MER5B DNA MER1_type 4 178 0 391 294 199 15 chr5 44483328 44483655 -155146495 - L2 LINE L2 -1042 2272 1886 9816 169 48 53 chr5 44483971 44487678 -155142472 + L1MA3 LINE L1 3500 5731 -574 225 267 0 17 chr5 44487678 44487738 -155142412 + MLT1F1 LTR MaLR 49 107 -460 9816 169 48 53 chr5 44487738 44488311 -155141839 + L1MA3 LINE L1 5731 6305 0 851 202 125 77 chr5 44489168 44489569 -155140581 + Charlie4a DNA MER1_type 83 502 -6 2312 80 0 3 chr5 44491398 44491699 -155138451 + AluY SINE Alu 1 300 -11 429 109 0 0 chr5 44491897 44491961 -155138189 + MSTA LTR MaLR 365 428 0 763 308 89 21 chr5 44492010 44492736 -155137414 - L2 LINE L2 -13 3300 2515 1856 111 63 0 chr5 44493214 44493494 -155136656 - AluSc SINE Alu 0 309 14 207 276 153 55 chr5 44493621 44493784 -155136366 + MER5A DNA MER1_type 7 185 -4 1189 183 139 33 chr5 44493884 44494157 -155135993 - AluJb SINE Alu 0 302 1 541 283 13 0 chr5 44494390 44494542 -155135608 + L1ME3A LINE L1 6007 6160 -10 579 246 52 72 chr5 44494618 44494913 -155135237 + L1ME LINE L1 5480 5788 -378 26 50 0 0 chr5 44495067 44495107 -155135043 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 44495119 44495142 -155135008 + AT_rich Low_complexity Low_complexity 1 23 0 227 184 0 0 chr5 44495209 44495247 -155134903 + U6 snRNA snRNA 2 39 -68 3182 61 2 9 chr5 44495287 44495711 -155134439 + L1PA8 LINE L1 5749 6169 -3 6888 25 0 0 chr5 44495725 44496539 -155133611 - L1PA3 LINE L1 -1066 5080 4267 7638 31 0 0 chr5 44496539 44497610 -155132540 + L1PA3 LINE L1 5085 6155 0 531 251 151 22 chr5 44497890 44498069 -155132081 - MIR SINE MIR -1 261 60 1981 126 27 10 chr5 44498130 44498423 -155131727 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr5 44498516 44498537 -155131613 + AT_rich Low_complexity Low_complexity 1 21 0 248 217 63 147 chr5 44498944 44499087 -155131063 - MIR3 SINE MIR -49 159 29 1774 147 0 39 chr5 44499527 44499836 -155130314 - AluJo SINE Alu 0 306 9 366 200 9 19 chr5 44500470 44500575 -155129575 + CT-rich Low_complexity Low_complexity 3 106 0 776 156 35 0 chr5 44501191 44501332 -155128818 + L1PA14 LINE L1 6015 6160 -1 5411 57 0 0 chr5 44702191 44702892 -154927258 + L1PA5 LINE L1 5446 6146 -8 3240 202 35 46 chr5 44702909 44703901 -154926249 + L1ME1 LINE L1 5189 6165 -1 22 56 0 0 chr5 44706408 44706444 -154923706 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 44706829 44706850 -154923300 + AT_rich Low_complexity Low_complexity 1 21 0 919 223 57 40 chr5 44708696 44708749 -154921401 - MIR SINE MIR -10 252 201 2457 86 0 0 chr5 44708749 44709050 -154921100 + AluSq SINE Alu 1 301 -12 919 223 57 40 chr5 44709050 44709243 -154920907 - MIR SINE MIR -61 201 2 940 216 19 10 chr5 44709280 44709488 -154920662 - MER20 DNA MER1_type -9 210 1 2274 85 10 3 chr5 44709584 44709877 -154920273 + AluSq SINE Alu 1 295 -18 1636 148 63 25 chr5 44709947 44710231 -154919919 + AluSx SINE Alu 11 305 -7 2077 113 10 3 chr5 44710262 44710554 -154919596 + AluSg SINE Alu 1 294 -16 1124 142 11 11 chr5 44710554 44710730 -154919420 + AluSg/x SINE Alu 134 309 -3 4157 177 42 17 chr5 44710894 44712256 -154917894 - L1MB8 LINE L1 -37 6141 4747 1622 264 25 29 chr5 44712393 44713098 -154917052 + L1M3d LINE L1 1 511 -5380 * 2865 163 69 23 chr5 44713087 44713469 -154916681 + L1MB1 LINE L1 4674 5037 -1158 235 0 28 28 chr5 44713469 44713505 -154916645 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 2865 163 69 23 chr5 44713505 44713881 -154916269 + L1MB1 LINE L1 5037 5452 -743 906 75 8 0 chr5 44713885 44714005 -154916145 + AluSg/x SINE Alu 162 282 -28 6871 49 19 162 chr5 44714005 44715251 -154914899 + SVA Other Other 316 1383 -3 21 0 0 0 chr5 44715304 44715325 -154914825 + AT_rich Low_complexity Low_complexity 1 21 0 2560 160 46 14 chr5 44715325 44715379 -154914771 + L1MB1 LINE L1 5439 5490 -678 2268 110 0 0 chr5 44715379 44715680 -154914470 + AluSx SINE Alu 1 301 -11 2560 160 46 14 chr5 44715680 44716144 -154914006 + L1MB1 LINE L1 5490 5974 -194 2157 123 0 0 chr5 44716145 44716455 -154913695 + AluSg SINE Alu 1 310 0 2160 112 20 3 chr5 44716645 44716939 -154913211 - AluSx SINE Alu -13 299 1 768 189 8 0 chr5 44716946 44717078 -154913072 - FLAM_C SINE Alu 0 133 1 2591 43 3 0 chr5 44717576 44717876 -154912274 - AluY SINE Alu -10 301 1 309 167 24 12 chr5 44717935 44718019 -154912131 + (TA)n Simple_repeat Simple_repeat 2 86 0 31 0 0 0 chr5 44718439 44718470 -154911680 + AT_rich Low_complexity Low_complexity 1 31 0 2169 123 7 7 chr5 44719790 44720098 -154910052 + AluSx SINE Alu 1 308 -4 302 24 48 0 chr5 44720766 44720808 -154909342 + (TTAGGG)n Simple_repeat Simple_repeat 4 47 0 2002 127 0 3 chr5 44721479 44721796 -154908354 - AluSx SINE Alu 0 316 1 1149 80 53 84 chr5 44722207 44722432 -154907718 - L1MB3 LINE L1 -3 6180 5963 26 64 0 0 chr5 44722693 44722740 -154907410 + AT_rich Low_complexity Low_complexity 1 47 0 2035 124 50 16 chr5 44723180 44723543 -154906607 - THE1C LTR MaLR 0 375 1 1614 154 59 26 chr5 44723841 44724114 -154906036 - AluJo SINE Alu -30 282 1 2138 88 10 30 chr5 44724409 44724705 -154905445 - AluSx SINE Alu -22 290 1 745 192 19 13 chr5 44725100 44725256 -154904894 - MER58A DNA MER1_type -22 202 46 286 270 111 9 chr5 44725397 44725538 -154904612 + MER20B DNA MER1_type 56 213 -6 205 250 0 0 chr5 44725684 44725728 -154904422 + (CA)n Simple_repeat Simple_repeat 1 44 0 597 338 125 36 chr5 44726485 44727274 -154902876 - L2 LINE L2 -2 3311 2456 1100 301 183 8 chr5 44727456 44728073 -154902077 - L2 LINE L2 -1208 2106 1382 648 251 137 23 chr5 44728466 44728685 -154901465 - MIR SINE MIR -11 251 8 1901 153 0 13 chr5 44728809 44729109 -154901041 + AluSx SINE Alu 1 296 -16 2885 236 38 23 chr5 44729375 44729925 -154900225 - L1ME1 LINE L1 -5 6230 5654 2121 101 0 11 chr5 44729925 44730394 -154899756 + AluSx SINE Alu 1 466 0 2885 236 38 23 chr5 44730394 44730828 -154899322 - L1ME1 LINE L1 -581 5654 5228 1142 244 30 33 chr5 44730835 44731174 -154898976 - L1ME1 LINE L1 -1290 4925 4586 2547 135 61 10 chr5 44731174 44731581 -154898569 + MSTA LTR MaLR 1 428 0 1142 244 30 33 chr5 44731581 44731732 -154898418 - L1ME1 LINE L1 -1629 4586 4436 938 269 72 28 chr5 44731832 44732263 -154897887 - L1ME1 LINE L1 -4402 1994 1545 493 331 70 21 chr5 44732279 44732663 -154897487 + LTR16B LTR ERVL 62 464 0 1598 281 75 38 chr5 44732664 44733485 -154896665 - L1ME1 LINE L1 -5319 1077 215 2137 128 0 3 chr5 44733485 44733789 -154896361 + AluSx SINE Alu 1 303 -9 1598 281 75 38 chr5 44733789 44733918 -154896232 - L1ME1 LINE L1 -6181 215 92 182 36 0 36 chr5 44734095 44734123 -154896027 + (TAA)n Simple_repeat Simple_repeat 3 29 0 700 317 75 0 chr5 44734123 44734350 -154895800 - MIR SINE MIR -14 248 5 596 316 85 54 chr5 44734720 44735144 -154895006 - L2 LINE L2 -13 3300 2864 2112 128 0 3 chr5 44735270 44735559 -154894591 + AluSx SINE Alu 2 289 -23 21 0 0 0 chr5 44736266 44736287 -154893863 + AT_rich Low_complexity Low_complexity 1 21 0 563 247 123 34 chr5 44736723 44737196 -154892954 + L1MC4 LINE L1 7276 7914 -128 206 216 0 0 chr5 44737198 44737235 -154892915 + (TG)n Simple_repeat Simple_repeat 2 38 0 687 266 6 12 chr5 44737304 44737477 -154892673 - AluJb SINE Alu -12 300 129 195 42 0 0 chr5 44737510 44737534 -154892616 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 842 211 0 0 chr5 44737534 44737695 -154892455 - AluJo SINE Alu -32 280 120 408 321 24 0 chr5 44737760 44737928 -154892222 - L1 LINE L1 -1093 5053 4882 268 274 0 0 chr5 44737970 44738032 -154892118 + A-rich Low_complexity Low_complexity 1 62 0 2259 88 7 3 chr5 44738842 44739137 -154891013 - AluSp SINE Alu -17 296 1 1744 214 62 71 chr5 44739150 44739610 -154890540 + L1MC5 LINE L1 7116 7578 -383 2189 115 0 3 chr5 44739610 44739906 -154890244 - AluSq SINE Alu -18 295 1 1744 214 62 71 chr5 44739906 44739978 -154890172 + L1MC5 LINE L1 7578 7649 -312 2045 135 7 0 chr5 44739978 44740274 -154889876 - AluSx SINE Alu -13 299 2 1744 214 62 71 chr5 44740274 44740557 -154889593 + L1MC5 LINE L1 7649 7925 -36 1865 108 126 0 chr5 44740632 44740901 -154889249 + AluSx SINE Alu 1 303 -9 200 186 0 51 chr5 44741214 44741273 -154888877 + A-rich Low_complexity Low_complexity 3 58 0 14129 125 26 17 chr5 44741409 44741588 -154888562 - Tigger1 DNA MER2_type 0 2418 2242 2426 92 0 0 chr5 44741588 44741883 -154888267 + AluSg SINE Alu 2 296 -14 14129 125 26 17 chr5 44741883 44742067 -154888083 - Tigger1 DNA MER2_type -176 2242 2061 1506 183 48 35 chr5 44742067 44742356 -154887794 + AluJb SINE Alu 1 293 -19 14129 125 26 17 chr5 44742356 44743456 -154886694 - Tigger1 DNA MER2_type -357 2061 920 2433 85 0 3 chr5 44743456 44743763 -154886387 + AluSc SINE Alu 1 306 -3 14129 125 26 17 chr5 44743763 44744682 -154885468 - Tigger1 DNA MER2_type -1498 920 11 2324 106 3 3 chr5 44744862 44745174 -154884976 + AluSx SINE Alu 1 312 0 225 352 64 54 chr5 44746022 44746414 -154883736 - L2 LINE L2 -1738 1576 1181 737 198 71 61 chr5 44748300 44748512 -154881638 - MER20 DNA MER1_type -5 214 1 1912 200 86 103 chr5 44748530 44748738 -154881412 + Charlie1a DNA MER1_type 31 241 -2520 1836 121 89 0 chr5 44748738 44749020 -154881130 + AluJb SINE Alu 1 307 -5 1912 200 86 103 chr5 44749020 44749627 -154880523 + Charlie1a DNA MER1_type 241 832 -623 502 260 80 7 chr5 44749628 44749778 -154880372 + MLT1F LTR MaLR 1 161 -381 245 236 65 106 chr5 44749778 44749901 -154880249 + L1ME3A LINE L1 6029 6146 -24 2122 105 6 25 chr5 44750750 44751065 -154879085 - AluSq SINE Alu -4 309 1 302 297 135 11 chr5 44752943 44753209 -154876941 + L1MC4 LINE L1 7620 7918 -124 201 273 0 0 chr5 44753216 44753271 -154876879 + (TA)n Simple_repeat Simple_repeat 2 56 0 2096 104 10 3 chr5 44753768 44754057 -154876093 + AluSg SINE Alu 1 291 -19 559 280 90 5 chr5 44755127 44755316 -154874834 - MIR3 SINE MIR -1 207 3 781 146 0 24 chr5 44755728 44755851 -154874299 - FLAM_C SINE Alu -20 123 4 709 312 52 12 chr5 44757392 44757642 -154872508 - MIR SINE MIR 0 262 3 303 241 71 7 chr5 44757718 44757859 -154872291 + L1ME4a LINE L1 5971 6120 -1 225 155 84 28 chr5 44758286 44758357 -154871793 + MER116 DNA Mariner 1 75 -5 1560 162 9 70 chr5 44758493 44758821 -154871329 + AluJo SINE Alu 2 309 -3 732 157 0 0 chr5 44758834 44758942 -154871208 - FLAM_C SINE Alu -30 113 6 343 282 106 47 chr5 44758956 44759211 -154870939 - L1ME4a LINE L1 -1 6120 5851 35 54 0 0 chr5 44760261 44760317 -154869833 + AT_rich Low_complexity Low_complexity 1 56 0 180 0 0 0 chr5 44761654 44761674 -154868476 + (A)n Simple_repeat Simple_repeat 1 20 0 1852 164 0 16 chr5 44761947 44762258 -154867892 + AluSx SINE Alu 1 306 -6 2114 108 27 0 chr5 44762366 44762663 -154867487 - AluSx SINE Alu -7 305 1 67 42 0 0 chr5 44762702 44762797 -154867353 + AT_rich Low_complexity Low_complexity 1 95 0 22 35 0 0 chr5 44762965 44762994 -154867156 + AT_rich Low_complexity Low_complexity 1 29 0 1721 168 14 0 chr5 44762995 44763280 -154866870 + AluJo SINE Alu 1 289 -23 389 263 215 19 chr5 44763980 44764189 -154865961 - L2 LINE L2 -1 3312 3063 1643 183 7 3 chr5 44764419 44764704 -154865446 - AluJb SINE Alu -26 286 1 307 276 130 48 chr5 44765229 44765584 -154864566 + HAL1 LINE L1 2 385 -2122 684 286 136 40 chr5 44765626 44766279 -154863871 + HAL1 LINE L1 480 1195 -1312 198 0 0 0 chr5 44766322 44766344 -154863806 + (T)n Simple_repeat Simple_repeat 1 22 0 193 304 29 0 chr5 44766614 44766683 -154863467 + MIR3 SINE MIR 123 193 -15 406 307 62 34 chr5 44766878 44767054 -154863096 + MIR3 SINE MIR 22 202 -6 1739 288 131 4 chr5 44767318 44768295 -154861855 - L2 LINE L2 0 3313 2202 2400 87 0 0 chr5 44768789 44769087 -154861063 - AluSq SINE Alu -15 298 1 1977 118 7 36 chr5 44769426 44769565 -154860585 + AluSx SINE Alu 1 143 -169 2320 91 0 3 chr5 44769565 44769872 -154860278 + AluSq SINE Alu 1 306 -7 1977 118 7 36 chr5 44769872 44770036 -154860114 + AluSx SINE Alu 143 295 -17 332 248 39 31 chr5 44770309 44770438 -154859712 - L1ME1 LINE L1 -22 6144 6015 1824 159 0 43 chr5 44770547 44770873 -154859277 - AluJb SINE Alu 0 312 1 11402 127 32 31 chr5 44770979 44773062 -154857088 - Ricksha_c DNA DNA -13 2033 8 1039 247 157 22 chr5 44773088 44773590 -154856560 + HAL1 LINE L1 1648 2217 -290 221 266 89 13 chr5 44774114 44774193 -154855957 - L2 LINE L2 0 3272 3188 2284 82 3 10 chr5 44775253 44775546 -154854604 + AluSg SINE Alu 1 291 -19 525 288 45 49 chr5 44775665 44775908 -154854242 + MIR SINE MIR 21 262 0 581 206 71 8 chr5 44776529 44776655 -154853495 - MIR SINE MIR -109 153 20 327 73 0 55 chr5 44776855 44776910 -154853240 - L2 LINE L2 0 3313 3262 2203 80 0 11 chr5 44777001 44777319 -154852831 - AluSq SINE Alu 0 315 1 1323 221 47 55 chr5 44777431 44777617 -154852533 + MLT1C LTR MaLR 11 197 -270 342 0 0 0 chr5 44777617 44777655 -154852495 + (GA)n Simple_repeat Simple_repeat 2 39 0 1323 221 47 55 chr5 44777655 44777748 -154852402 + MLT1C LTR MaLR 197 289 -178 2359 94 0 0 chr5 44777748 44778045 -154852105 + AluSx SINE Alu 1 297 -15 1323 221 47 55 chr5 44778045 44778216 -154851934 + MLT1C LTR MaLR 289 458 -9 925 156 7 7 chr5 44778233 44778433 -154851717 + L1MDb LINE L1 1141 1634 -4693 1819 159 3 52 chr5 44778433 44778760 -154851390 + AluSx SINE Alu 1 311 -1 1287 241 48 22 chr5 44778760 44778957 -154851193 + L1MA6 LINE L1 2983 3173 -4392 2259 81 3 0 chr5 44778957 44779270 -154850880 + AluSp SINE Alu 1 314 0 1287 241 48 22 chr5 44779270 44779849 -154850301 + L1MA6 LINE L1 3173 3785 -3780 2597 173 23 19 chr5 44779849 44780341 -154849809 + L1MA6 LINE L1 6114 6610 -955 1999 118 10 0 chr5 44780341 44780629 -154849521 + AluSg SINE Alu 19 309 -1 2597 173 23 19 chr5 44780629 44780702 -154849448 + L1MA6 LINE L1 6610 6681 -884 2177 139 0 0 chr5 44780702 44781011 -154849139 + AluJb SINE Alu 1 309 -3 1761 141 32 0 chr5 44781011 44781324 -154848826 + L1MA6 LINE L1 6784 7106 -604 1766 165 46 14 chr5 44781327 44781697 -154848453 + L1MA6 LINE L1 7335 7716 -3 2381 83 0 3 chr5 44782296 44782618 -154847532 - AluSc SINE Alu 0 309 1 336 284 193 0 chr5 44782674 44782834 -154847316 - MIR3 SINE MIR -65 197 3 307 252 41 81 chr5 44783546 44783669 -154846481 - L1ME3A LINE L1 -88 6082 5965 487 264 174 35 chr5 44783954 44784321 -154845829 - L1MC4a LINE L1 -1867 5941 5524 260 356 0 0 chr5 44784318 44784450 -154845700 - L1ME3A LINE L1 -217 5953 5822 * 2362 101 0 16 chr5 44784560 44784876 -154845274 + AluSq SINE Alu 1 311 -2 2213 93 7 3 chr5 44785608 44785897 -154844253 + AluSq SINE Alu 9 298 -15 2139 152 13 9 chr5 44785897 44786526 -154843624 - L1PB1 LINE L1 -624 5527 4898 3843 107 40 16 chr5 44786526 44786781 -154843369 + L1PB1 LINE L1 5512 5759 -392 468 51 0 0 chr5 44786781 44786840 -154843310 + (CA)n Simple_repeat Simple_repeat 2 60 0 3843 107 40 16 chr5 44786840 44787206 -154842944 + L1PB1 LINE L1 5759 6150 -1 231 214 0 0 chr5 44787474 44787516 -154842634 + MLT1L LTR MaLR 569 610 -5 2268 109 3 6 chr5 44787839 44788152 -154841998 + AluSx SINE Alu 1 312 0 839 108 0 0 chr5 44788899 44789019 -154841131 - L1PB3 LINE L1 -2 6152 6033 180 0 0 0 chr5 44789665 44789685 -154840465 + (CCCCCA)n Simple_repeat Simple_repeat 4 23 0 230 214 43 0 chr5 44790004 44790074 -154840076 + G-rich Low_complexity Low_complexity 4 76 0 225 283 17 0 chr5 44792013 44792073 -154838077 - L3 LINE CR1 -2 1575 1515 6546 71 20 36 chr5 44792192 44793371 -154836779 + SVA Other Other 432 1383 -3 27 0 0 0 chr5 44793371 44793398 -154836752 + AT_rich Low_complexity Low_complexity 1 27 0 1550 192 3 20 chr5 44793837 44794134 -154836016 - AluJo SINE Alu -20 292 1 2208 131 3 0 chr5 44794180 44794485 -154835665 + AluSp SINE Alu 1 306 -7 277 213 16 0 chr5 44794778 44794839 -154835311 - L3 LINE CR1 -561 1016 955 203 338 62 0 chr5 44794857 44794937 -154835213 - L2 LINE L2 -20 3293 3209 1141 202 0 31 chr5 44794979 44795207 -154834943 + AluJo SINE Alu 84 304 -8 2052 146 3 3 chr5 44795345 44795653 -154834497 + AluJb SINE Alu 3 310 -2 2160 112 7 3 chr5 44795653 44795948 -154834202 + AluSx SINE Alu 1 296 -16 2274 90 7 0 chr5 44796039 44796338 -154833812 + AluSx SINE Alu 1 301 -11 2303 100 0 0 chr5 44796916 44797216 -154832934 - AluY SINE Alu -11 300 1 2338 88 0 7 chr5 44797316 44797623 -154832527 + AluSc SINE Alu 1 305 -4 1123 133 0 0 chr5 44797717 44797905 -154832245 + L1MA4A LINE L1 6109 6296 -7 21 0 0 0 chr5 44797908 44797929 -154832221 + AT_rich Low_complexity Low_complexity 1 21 0 1544 179 18 7 chr5 44798218 44798497 -154831653 - AluJb SINE Alu -30 282 1 2189 102 0 3 chr5 44798586 44798880 -154831270 - AluSg SINE Alu -6 304 12 2065 95 27 20 chr5 44799408 44799702 -154830448 + AluY SINE Alu 1 296 -15 1977 150 3 0 chr5 44800293 44800599 -154829551 - AluSx SINE Alu -5 307 1 1149 163 24 20 chr5 44800610 44800862 -154829288 - L1MC3 LINE L1 0 7785 7533 285 51 0 0 chr5 44800862 44800901 -154829249 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1967 108 4 11 chr5 44800909 44801186 -154828964 - AluSg SINE Alu -35 275 1 1255 193 84 36 chr5 44801202 44801534 -154828616 + MLT1A1 LTR MaLR 1 348 -17 3417 196 31 29 chr5 44801608 44802338 -154827812 - MER21B LTR ERV1 -113 750 19 331 321 15 22 chr5 44802357 44802491 -154827659 - L1MC4 LINE L1 -1296 6746 6614 2404 66 3 0 chr5 44802496 44802784 -154827366 - AluSp SINE Alu -24 289 1 5097 142 33 95 chr5 44802836 44803764 -154826386 - L1MC3 LINE L1 -265 7520 6536 2252 141 28 17 chr5 44803764 44804125 -154826025 - MLT1A1 LTR MaLR 0 365 1 5097 142 33 95 chr5 44804125 44804516 -154825634 - L1MC3 LINE L1 -1249 6536 6122 1968 146 0 13 chr5 44804516 44804831 -154825319 - AluJb SINE Alu -1 311 1 2430 78 3 7 chr5 44804840 44805146 -154825004 - AluSp SINE Alu -8 305 1 5097 142 33 95 chr5 44805146 44805254 -154824896 - L1MC3 LINE L1 -1671 6114 6001 2788 163 59 0 chr5 44805254 44805744 -154824406 - LTR53 LTR ERVL 0 519 1 5097 142 33 95 chr5 44805744 44805774 -154824376 - L1MC3 LINE L1 -1784 6001 5971 1909 171 0 3 chr5 44805774 44806073 -154824077 - AluJb SINE Alu -14 298 1 5097 142 33 95 chr5 44806073 44806372 -154823778 - L1MC3 LINE L1 -1814 5971 5840 2243 106 0 7 chr5 44806540 44806833 -154823317 - AluSc SINE Alu -18 291 1 1836 193 37 3 chr5 44806980 44807333 -154822817 + MLT1A1 LTR MaLR 1 365 0 1597 224 47 62 chr5 44807633 44808186 -154821964 - HAL1 LINE L1 -440 2067 1523 309 156 177 0 chr5 44808198 44808295 -154821855 - L1ME1 LINE L1 0 6184 6072 255 170 0 0 chr5 44808298 44808345 -154821805 + (TA)n Simple_repeat Simple_repeat 2 48 0 844 150 23 0 chr5 44808350 44808483 -154821667 - AluJb SINE Alu -176 136 1 357 222 0 127 chr5 44808484 44808526 -154821624 - L1ME1 LINE L1 -48 6118 6072 2320 100 10 0 chr5 44808526 44808835 -154821315 + AluSp SINE Alu 1 312 -1 357 222 0 127 chr5 44808835 44808918 -154821232 - L1ME1 LINE L1 -94 6072 6009 334 158 0 0 chr5 44808914 44808971 -154821179 - L1MD3 LINE L1 -2028 5967 5911 * 553 186 0 0 chr5 44808972 44809058 -154821092 + AluSx SINE Alu 2 87 -226 2176 112 7 0 chr5 44809058 44809352 -154820798 + AluSx SINE Alu 1 296 -16 1666 113 0 21 chr5 44809353 44809592 -154820558 + AluSx SINE Alu 76 309 -3 2299 173 77 62 chr5 44809599 44809928 -154820222 - L1ME1 LINE L1 -258 5908 5565 2898 95 28 5 chr5 44809928 44810361 -154819789 - L1PB2 LINE L1 -1 6150 5708 2299 173 77 62 chr5 44810361 44810614 -154819536 - L1ME1 LINE L1 -601 5565 5317 2448 62 0 33 chr5 44810629 44810935 -154819215 + AluY SINE Alu 1 296 -15 584 126 136 0 chr5 44810937 44811040 -154819110 - AluSc SINE Alu 0 309 193 786 186 122 30 chr5 44811067 44811304 -154818846 - L1ME1 LINE L1 -904 5242 4984 26 0 0 0 chr5 44811328 44811354 -154818796 + AT_rich Low_complexity Low_complexity 1 26 0 1085 178 38 2 chr5 44811420 44811642 -154818508 - L1ME1 LINE L1 -1181 4965 4740 180 0 0 0 chr5 44811655 44811675 -154818475 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2425 81 19 3 chr5 44811778 44812085 -154818065 - AluSq SINE Alu -1 312 1 1758 104 65 11 chr5 44812091 44812351 -154817799 - AluSq SINE Alu -39 274 1 1921 171 13 0 chr5 44812386 44812690 -154817460 - AluJb SINE Alu 0 312 5 373 115 0 0 chr5 44813208 44813260 -154816890 - MLT1A1 LTR MaLR -2 363 312 2236 169 61 2 chr5 44813262 44813658 -154816492 - MSTB LTR MaLR -4 422 4 794 175 31 135 chr5 44813679 44814058 -154816092 - MLT1A1 LTR MaLR -38 358 21 1030 202 112 25 chr5 44814061 44814154 -154815996 + MSTD LTR MaLR 2 85 -311 2026 139 3 3 chr5 44814154 44814456 -154815694 + AluSx SINE Alu 1 302 -10 1030 202 112 25 chr5 44814456 44814690 -154815460 + MSTD LTR MaLR 85 396 0 2407 85 3 7 chr5 44814746 44815052 -154815098 + AluSp SINE Alu 1 305 -8 675 239 100 17 chr5 44815295 44815525 -154814625 + LTR41 LTR ERVL 521 769 -4 2062 128 0 3 chr5 44815674 44815964 -154814186 - AluSx SINE Alu -23 289 1 2150 96 7 7 chr5 44816382 44816664 -154813486 - AluSg SINE Alu -28 282 1 1983 129 14 10 chr5 44817276 44817571 -154812579 - AluSx SINE Alu -16 296 1 27 29 0 0 chr5 44817895 44817929 -154812221 + AT_rich Low_complexity Low_complexity 1 34 0 1702 154 28 18 chr5 44818352 44818637 -154811513 - AluJb SINE Alu -23 289 2 906 159 92 0 chr5 44819292 44819455 -154810695 - AluSg/x SINE Alu -17 293 116 326 280 28 9 chr5 44819915 44820022 -154810128 + L2 LINE L2 3204 3312 -1 239 240 115 31 chr5 44820356 44820452 -154809698 + L2 LINE L2 3209 3312 -1 1770 89 0 13 chr5 44821299 44821534 -154808616 - AluSp SINE Alu -81 232 1 719 175 0 0 chr5 44821864 44821978 -154808172 + AluJb SINE Alu 5 118 -194 2181 120 3 0 chr5 44822036 44822328 -154807822 - AluSc SINE Alu -16 293 1 1232 124 10 161 chr5 44822499 44822790 -154807360 + AluYb8 SINE Alu 1 247 -71 501 178 22 0 chr5 44824785 44824875 -154805275 + MER20 DNA MER1_type 107 198 -21 1220 174 12 21 chr5 44825363 44825605 -154804545 + AluJb SINE Alu 64 303 -9 192 158 0 0 chr5 44827020 44827058 -154803092 + (CTG)n Simple_repeat Simple_repeat 1 38 0 1813 144 3 19 chr5 44827470 44827783 -154802367 + AluJb SINE Alu 1 308 -4 531 215 69 24 chr5 44827783 44827905 -154802245 - MLT1D LTR MaLR -129 376 266 1681 154 55 33 chr5 44827905 44828235 -154801915 - MER44D DNA MER2_type -2 607 1 531 215 69 24 chr5 44828235 44828261 -154801889 - MLT1D LTR MaLR -239 266 243 416 204 97 0 chr5 44828300 44828393 -154801757 - AluSg SINE Alu -181 129 28 520 218 58 78 chr5 44828394 44828600 -154801550 - MLT1D LTR MaLR -302 203 2 2169 102 3 16 chr5 44828912 44829217 -154800933 - AluSx SINE Alu -11 301 1 440 66 79 0 chr5 44829471 44829547 -154800603 - Tigger7 DNA MER2_type -95 2392 2311 678 116 11 0 chr5 44829548 44829643 -154800507 + AluS SINE Alu 2 97 -216 2441 72 3 0 chr5 44829867 44830160 -154799990 - AluSp SINE Alu -19 294 1 811 129 73 0 chr5 44830184 44830308 -154799842 + AluJo/FLAM SINE Alu 1 133 -179 1737 174 3 14 chr5 44830311 44830604 -154799546 + AluJo SINE Alu 13 302 -10 446 149 107 38 chr5 44830905 44831120 -154799030 + L1MA7 LINE L1 5961 6291 0 1433 159 17 21 chr5 44831212 44831445 -154798705 - AluJo SINE Alu -80 232 1 357 275 92 84 chr5 44831621 44831992 -154798158 - L1ME3A LINE L1 -233 5937 5693 26 74 0 0 chr5 44832004 44832058 -154798092 + AT_rich Low_complexity Low_complexity 1 54 0 685 254 115 72 chr5 44832067 44832167 -154797983 - L1MC4a LINE L1 -70 6051 5957 184 57 29 29 chr5 44832167 44832202 -154797948 + (CATATA)n Simple_repeat Simple_repeat 1 35 0 685 254 115 72 chr5 44832202 44832604 -154797546 - L1MC4a LINE L1 -164 5957 5527 196 241 38 51 chr5 44832608 44832687 -154797463 - L2 LINE L2 -186 3086 3009 2277 118 0 0 chr5 44834298 44834604 -154795546 + AluSq SINE Alu 1 306 -7 1791 154 39 0 chr5 44835794 44836073 -154794077 - AluJb SINE Alu -22 290 1 1971 143 84 84 chr5 44836269 44836408 -154793742 - MLT1C LTR MaLR 0 467 329 2190 114 10 0 chr5 44836408 44836707 -154793443 - AluSx SINE Alu -8 304 3 1971 143 84 84 chr5 44836707 44837030 -154793120 - MLT1C LTR MaLR -137 330 5 23 0 0 0 chr5 44837088 44837111 -154793039 + AT_rich Low_complexity Low_complexity 1 23 0 375 106 0 17 chr5 44837282 44837354 -154792796 - AluJb SINE Alu -188 114 65 265 223 128 21 chr5 44837356 44837450 -154792700 - MLT1I LTR MaLR -25 384 281 261 175 48 14 chr5 44837425 44837537 -154792613 - MLT1H LTR MaLR -104 445 256 * 2463 87 0 0 chr5 44837557 44837856 -154792294 - AluSx SINE Alu -13 299 1 576 200 111 93 chr5 44837919 44837988 -154792162 - MLT1H LTR MaLR -318 231 165 1682 191 90 40 chr5 44837988 44838433 -154791717 - MLT1C LTR MaLR 0 467 1 576 200 111 93 chr5 44838433 44838588 -154791562 - MLT1H LTR MaLR -384 165 3 1413 266 128 35 chr5 44838949 44839751 -154790399 - L1ME LINE L1 -4448 1632 715 1893 154 3 23 chr5 44839751 44840056 -154790094 - AluJb SINE Alu -13 299 1 1413 266 128 35 chr5 44840056 44840357 -154789793 - L1ME LINE L1 -5365 715 443 1956 108 63 28 chr5 44840551 44840837 -154789313 - AluSq SINE Alu -17 296 1 1761 165 7 20 chr5 44841234 44841531 -154788619 + AluJb SINE Alu 1 293 -19 2397 84 0 7 chr5 44841673 44841981 -154788169 + AluSc SINE Alu 1 306 -3 2149 96 16 32 chr5 44841981 44842294 -154787856 + AluSx SINE Alu 1 309 -3 24 32 0 0 chr5 44842326 44842357 -154787793 + AT_rich Low_complexity Low_complexity 1 31 0 414 283 50 30 chr5 44842394 44842592 -154787558 + L1MC4a LINE L1 5732 5933 -1875 2154 110 14 3 chr5 44842599 44842890 -154787260 + AluSx SINE Alu 1 294 -18 1797 135 23 0 chr5 44843088 44843348 -154786802 + AluSx SINE Alu 1 266 -46 1241 173 153 4 chr5 44843409 44843663 -154786487 + AluJo SINE Alu 1 292 -20 2263 108 3 0 chr5 44846139 44846436 -154783714 - AluSp SINE Alu -15 298 1 1739 123 54 90 chr5 44846932 44847094 -154783056 + THE1C LTR MaLR 1 167 -208 1944 165 7 0 chr5 44847094 44847391 -154782759 - AluSx SINE Alu -13 299 1 1739 123 54 90 chr5 44847391 44847575 -154782575 + THE1C LTR MaLR 167 334 -41 2256 97 0 17 chr5 44847575 44847875 -154782275 - AluSg SINE Alu -15 295 1 1739 123 54 90 chr5 44847875 44847916 -154782234 + THE1C LTR MaLR 334 375 0 6628 21 12 8 chr5 44848017 44848794 -154781356 - L1PA2 LINE L1 0 6155 5376 21 0 0 0 chr5 44848952 44848973 -154781177 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 44849125 44849146 -154781004 + AT_rich Low_complexity Low_complexity 1 21 0 2283 92 7 7 chr5 44849345 44849648 -154780502 - AluSx SINE Alu -9 303 1 656 267 61 0 chr5 44849853 44850018 -154780132 - LTR33 LTR ERVL -344 177 3 191 314 14 0 chr5 44850068 44850138 -154780012 - L2 LINE L2 -1 3312 3242 1600 160 80 3 chr5 44850259 44850547 -154779603 + AluJo SINE Alu 1 310 -2 2071 96 25 11 chr5 44850559 44850839 -154779311 - AluSx SINE Alu -15 297 14 2090 135 0 3 chr5 44851069 44851381 -154778769 + AluSx SINE Alu 1 311 -1 745 113 0 0 chr5 44851519 44851625 -154778525 - FLAM_C SINE Alu -36 107 2 21 57 0 0 chr5 44851680 44851715 -154778435 + AT_rich Low_complexity Low_complexity 1 35 0 421 273 68 74 chr5 44852136 44852529 -154777621 - MLT1J LTR MaLR -43 468 38 1705 180 0 4 chr5 44852583 44852881 -154777269 + AluJb SINE Alu 12 308 0 414 202 0 22 chr5 44853123 44853212 -154776938 + MER65A LTR ERV1 1 87 -358 2403 83 0 3 chr5 44853213 44853513 -154776637 + AluSx SINE Alu 1 299 -13 764 142 8 0 chr5 44853534 44853654 -154776496 + AluSq/x SINE Alu 4 124 -189 2092 151 60 5 chr5 44853655 44854025 -154776125 + MER65A LTR ERV1 56 445 0 2160 98 3 64 chr5 44854136 44854464 -154775686 - AluSg SINE Alu -2 308 1 1653 109 27 16 chr5 44854475 44854732 -154775418 - AluSx SINE Alu -3 309 50 2416 77 3 13 chr5 44854756 44855066 -154775084 - AluY SINE Alu -4 307 1 2154 116 3 7 chr5 44855116 44855417 -154774733 + AluSx SINE Alu 1 300 -12 404 268 31 16 chr5 44855424 44855551 -154774599 - MER5A DNA MER1_type 0 189 61 803 142 24 8 chr5 44855570 44855697 -154774453 - AluJo SINE Alu -177 135 7 4608 92 58 59 chr5 44855926 44856979 -154773171 + MER11A LTR ERVK 1 1266 0 2131 112 7 3 chr5 44857396 44857682 -154772468 + AluSx SINE Alu 1 287 -25 975 299 70 19 chr5 44858396 44858808 -154771342 + LTR16B LTR ERVL 32 464 0 756 205 141 91 chr5 44858993 44859256 -154770894 - LTR1B LTR ERV1 -237 589 314 3874 95 40 0 chr5 44859461 44859989 -154770161 + MER41A LTR ERV1 6 554 0 293 234 37 37 chr5 44859990 44860097 -154770053 - LTR1B LTR ERV1 -681 145 39 1891 148 3 3 chr5 44860159 44860466 -154769684 - AluSx SINE Alu 0 307 1 360 200 120 0 chr5 44860588 44860663 -154769487 + LTR8 LTR ERV1 1 84 -607 2013 140 13 10 chr5 44860671 44860978 -154769172 - AluSx SINE Alu -4 308 1 295 222 242 33 chr5 44861046 44861199 -154768951 - MER5A DNA MER1_type -1 188 4 670 233 23 17 chr5 44861210 44861386 -154768764 - MER5B DNA MER1_type 0 178 2 2307 110 3 0 chr5 44861391 44861691 -154768459 + AluSx SINE Alu 1 301 -11 295 250 10 30 chr5 44861778 44861878 -154768272 + GA-rich Low_complexity Low_complexity 2 99 0 4182 155 11 16 chr5 44862299 44863001 -154767149 - LTR34 LTR ERV1 0 699 1 767 215 98 107 chr5 44863009 44863181 -154766969 - LTR8A LTR ERV1 -4 723 551 1862 159 0 13 chr5 44863181 44863483 -154766667 - AluJb SINE Alu -13 299 2 767 215 98 107 chr5 44863483 44863751 -154766399 - LTR8A LTR ERV1 -176 551 287 346 135 0 0 chr5 44863798 44863850 -154766300 + AluSx SINE Alu 1 52 -248 2717 140 46 64 chr5 44863850 44864349 -154765801 + LTR2B LTR ERV1 1 490 0 1730 119 4 0 chr5 44864349 44864593 -154765557 + AluSx SINE Alu 49 293 -19 1889 165 23 0 chr5 44864779 44865082 -154765068 + AluSx SINE Alu 1 310 -2 641 311 106 49 chr5 44865546 44866093 -154764057 + L2 LINE L2 2117 2694 -620 991 183 12 0 chr5 44866140 44866304 -154763846 + FRAM SINE Alu 1 158 -18 2403 101 0 0 chr5 44866308 44866640 -154763510 + AluSc SINE Alu 1 332 0 310 282 50 54 chr5 44866687 44866946 -154763204 - L1MC5 LINE L1 -64 7897 7640 624 277 25 9 chr5 44867065 44867294 -154762856 - L1MC5 LINE L1 -398 7410 7269 1794 163 7 3 chr5 44867454 44867774 -154762376 + AluJb SINE Alu 1 321 0 2182 103 4 0 chr5 44867948 44868229 -154761921 + AluSq SINE Alu 2 283 -30 1966 121 4 4 chr5 44868229 44868509 -154761641 + AluSg SINE Alu 24 303 -7 24 0 0 0 chr5 44868518 44868542 -154761608 + AT_rich Low_complexity Low_complexity 1 24 0 403 194 0 0 chr5 44868953 44869020 -154761130 + MER5A DNA MER1_type 9 75 -114 2032 154 118 90 chr5 44869032 44869565 -154760585 - LTR10A LTR ERV1 -61 548 1 2167 105 3 3 chr5 44869733 44870038 -154760112 - AluY SINE Alu -6 305 1 2256 93 3 3 chr5 44870442 44870733 -154759417 + AluSx SINE Alu 1 291 -21 233 326 80 7 chr5 44870753 44870891 -154759259 - MIR SINE MIR -26 236 89 4734 54 2 24 chr5 44871420 44871478 -154758672 - LTR8 LTR ERV1 -108 583 525 2227 116 3 0 chr5 44871478 44871789 -154758361 - AluSx SINE Alu 0 312 1 4734 54 2 24 chr5 44871789 44872326 -154757824 - LTR8 LTR ERV1 -166 525 1 309 50 0 0 chr5 44872326 44872366 -154757784 - HUERS-P1 LTR ERV1 0 6263 6224 344 325 67 34 chr5 44872423 44872534 -154757616 + L1MC/D LINE L1 5492 5598 -574 2186 134 0 0 chr5 44872534 44872839 -154757311 + AluSx SINE Alu 1 305 -7 344 325 67 34 chr5 44872839 44873022 -154757128 + L1MC/D LINE L1 5598 5806 -366 2423 82 76 0 chr5 44873024 44873354 -154756796 + THE1A LTR MaLR 1 355 0 11699 98 10 1 chr5 44873354 44874920 -154755230 + THE1A-int LTR MaLR 1 1580 0 2291 98 76 0 chr5 44874920 44875248 -154754902 + THE1A LTR MaLR 1 353 -2 478 339 45 22 chr5 44875696 44875920 -154754230 - MIR SINE MIR 0 262 34 265 267 0 0 chr5 44875997 44876057 -154754093 + MIR SINE MIR 194 253 -9 2032 147 10 0 chr5 44876075 44876381 -154753769 - AluSx SINE Alu -3 309 1 476 248 0 0 chr5 44876511 44876616 -154753534 + L2 LINE L2 3195 3299 -14 1793 172 11 0 chr5 44876839 44877124 -154753026 + AluSx SINE Alu 1 288 -24 2249 109 3 3 chr5 44877152 44877454 -154752696 - AluSq SINE Alu -11 302 1 2391 101 0 0 chr5 44877465 44877772 -154752378 - AluSq SINE Alu -6 307 1 1774 159 13 22 chr5 44877776 44878091 -154752059 - AluJo SINE Alu 0 312 1 2378 168 21 14 chr5 44878411 44878833 -154751317 + MSTB LTR MaLR 1 425 -1 852 285 44 4 chr5 44879876 44880146 -154750004 - L2 LINE L2 -1727 1587 1307 1912 163 7 0 chr5 44880516 44880810 -154749340 - AluSx SINE Alu -16 296 1 607 262 226 0 chr5 44880953 44881228 -154748922 - L2 LINE L2 -1776 1538 1202 342 115 0 0 chr5 44881441 44881502 -154748648 + (TC)n Simple_repeat Simple_repeat 1 61 0 243 140 0 0 chr5 44881501 44881551 -154748599 + (CA)n Simple_repeat Simple_repeat 1 50 0 * 2294 102 10 0 chr5 44881607 44881910 -154748240 - AluSq SINE Alu -7 306 1 6182 217 32 33 chr5 44882027 44882490 -154747660 + L1M4 LINE L1 3577 4039 -2107 2483 55 3 0 chr5 44882490 44882779 -154747371 + AluY SINE Alu 5 294 -17 6182 217 32 33 chr5 44882779 44882905 -154747245 + L1M4 LINE L1 4039 4164 -1982 207 0 0 0 chr5 44882905 44882928 -154747222 + (GA)n Simple_repeat Simple_repeat 2 24 0 6182 217 32 33 chr5 44882928 44883118 -154747032 + L1M4 LINE L1 4164 4353 -1793 2177 125 0 0 chr5 44883118 44883414 -154746736 - AluSx SINE Alu -16 296 1 6182 217 32 33 chr5 44883414 44884283 -154745867 + L1M4 LINE L1 4353 5226 -920 648 234 0 28 chr5 44884283 44884424 -154745726 + Tigger1 DNA MER2_type 1 137 -2281 1941 158 0 0 chr5 44884461 44884745 -154745405 - AluSx SINE Alu -28 284 1 5302 187 61 5 chr5 44884745 44885904 -154744246 - L1M1 LINE L1 -4065 1263 223 6833 60 7 13 chr5 44886006 44886711 -154743439 - L1P LINE L1 -1212 4934 4226 333 0 0 0 chr5 44886711 44886748 -154743402 + (TA)n Simple_repeat Simple_repeat 2 38 0 838 31 0 0 chr5 44886750 44886847 -154743303 - L1PA5 LINE L1 -6 6148 6052 6833 60 7 13 chr5 44886847 44887035 -154743115 - L1P LINE L1 -1921 4225 4044 9013 81 12 1 chr5 44887036 44888265 -154741885 - L1M1 LINE L1 -3304 3024 1782 984 164 52 65 chr5 44888901 44889133 -154741017 - L1M1 LINE L1 -5090 238 10 1764 164 3 30 chr5 44889591 44889895 -154740255 - AluJo SINE Alu -9 303 8 9497 144 22 23 chr5 44889920 44891532 -154738618 + L1P LINE L1 3 1613 -4533 1352 166 0 23 chr5 44891637 44891854 -154738296 - AluSx SINE Alu -100 212 1 30 69 0 0 chr5 44891879 44891937 -154738213 + AT_rich Low_complexity Low_complexity 1 58 0 511 235 81 105 chr5 44891996 44892305 -154737845 - L1MC4a LINE L1 -1717 6091 5791 1738 167 20 10 chr5 44892305 44892598 -154737552 + AluSx SINE Alu 5 300 -12 511 235 81 105 chr5 44892598 44892658 -154737492 - L1MC4a LINE L1 -2017 5791 5731 2259 120 3 0 chr5 44892662 44892970 -154737180 - AluSx SINE Alu -3 309 1 216 0 0 0 chr5 44892976 44893000 -154737150 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1622 186 0 7 chr5 44893008 44893283 -154736867 - AluJo SINE Alu -39 273 1 376 296 41 29 chr5 44893304 44893476 -154736674 - MIR SINE MIR -1 261 88 1786 159 0 11 chr5 44893541 44893824 -154736326 + AluJb SINE Alu 32 311 -1 1483 150 4 39 chr5 44893967 44894227 -154735923 - AluSg SINE Alu -4 306 56 814 103 0 0 chr5 44894432 44894539 -154735611 + FLAM_C SINE Alu 1 107 -36 2078 138 0 3 chr5 44894677 44894989 -154735161 - AluSx SINE Alu -1 311 1 2098 97 25 7 chr5 44895221 44895499 -154734651 + AluSx SINE Alu 14 296 -16 1600 160 80 3 chr5 44895511 44895799 -154734351 - AluJo SINE Alu -2 310 1 191 314 14 0 chr5 44895920 44895990 -154734160 + L2 LINE L2 3242 3312 -1 629 273 61 0 chr5 44896040 44896205 -154733945 + LTR33 LTR ERVL 3 177 -344 2387 91 0 7 chr5 44896410 44896717 -154733433 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr5 44896917 44896938 -154733212 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 44897090 44897111 -154733039 + AT_rich Low_complexity Low_complexity 1 21 0 6090 55 3 1 chr5 44897292 44898043 -154732107 + L1PA6 LINE L1 5400 6151 -3 1667 123 102 25 chr5 44900369 44900653 -154729497 - AluSg SINE Alu -4 306 1 1038 161 72 21 chr5 44900658 44900851 -154729299 - AluJo SINE Alu 0 312 110 1071 274 65 71 chr5 44901512 44901753 -154728397 + LTR16C LTR ERVL 1 242 -249 1732 150 0 70 chr5 44901753 44902080 -154728070 - AluSx SINE Alu -8 304 1 1071 274 65 71 chr5 44902080 44902330 -154727820 + LTR16C LTR ERVL 242 489 -2 2311 102 0 7 chr5 44902753 44903057 -154727093 - AluSg SINE Alu -8 302 1 22 0 0 0 chr5 44904887 44904909 -154725241 + AT_rich Low_complexity Low_complexity 1 22 0 1195 105 0 6 chr5 44904947 44905119 -154725031 + L1PA16 LINE L1 5806 5976 -190 404 141 0 0 chr5 44905119 44905190 -154724960 + Alu SINE Alu 241 311 0 22 0 0 0 chr5 44905408 44905430 -154724720 + AT_rich Low_complexity Low_complexity 1 22 0 332 180 16 0 chr5 44905435 44905496 -154724654 - U7 snRNA snRNA 0 63 2 274 231 0 15 chr5 44906027 44906092 -154724058 - MLT2F LTR ERVL -599 64 1 2302 97 0 34 chr5 44906095 44906416 -154723734 - AluSg SINE Alu 0 310 1 1559 170 79 4 chr5 44906762 44907027 -154723123 - AluJb SINE Alu -27 285 1 4039 125 5 3 chr5 44907174 44907798 -154722352 - L1PB4 LINE L1 -3 6153 5529 856 183 0 14 chr5 44907881 44908023 -154722127 - FRAM SINE Alu -30 146 7 22 56 0 0 chr5 44908026 44908062 -154722088 + AT_rich Low_complexity Low_complexity 1 36 0 2139 123 0 0 chr5 44908062 44908347 -154721803 - AluY SINE Alu -26 285 1 857 173 0 0 chr5 44908370 44908497 -154721653 - FLAM_C SINE Alu -16 127 1 1899 148 101 3 chr5 44908498 44908667 -154721483 - L1PB4 LINE L1 -666 5490 5339 186 71 0 0 chr5 44908667 44908695 -154721455 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1899 148 101 3 chr5 44908695 44909025 -154721125 - L1PB4 LINE L1 -817 5339 4961 244 262 116 23 chr5 44910463 44910635 -154719515 - L1ME4a LINE L1 -47 6074 5887 25 0 0 0 chr5 44911065 44911090 -154719060 + AT_rich Low_complexity Low_complexity 1 25 0 3538 135 23 48 chr5 44911114 44911297 -154718853 - L1MA8 LINE L1 -2 6289 6103 1690 113 0 0 chr5 44911297 44911526 -154718624 + AluSg/x SINE Alu 77 305 -7 3538 135 23 48 chr5 44911526 44912073 -154718077 - L1MA8 LINE L1 -188 6103 5577 332 248 52 46 chr5 44912315 44912515 -154717635 + L1M4c LINE L1 2091 2304 -4078 1120 178 19 19 chr5 44912526 44912734 -154717416 + AluJb SINE Alu 85 292 -20 258 56 0 0 chr5 44912748 44912784 -154717366 + (CAA)n Simple_repeat Simple_repeat 3 38 0 2673 223 28 18 chr5 44912784 44913313 -154716837 + L1M4c LINE L1 2339 2861 -3521 426 20 0 0 chr5 44913313 44913364 -154716786 + (CA)n Simple_repeat Simple_repeat 2 52 0 2673 223 28 18 chr5 44913364 44913498 -154716652 + L1M4c LINE L1 2861 3016 -3366 2092 132 0 3 chr5 44913498 44913794 -154716356 - AluSx SINE Alu -17 295 1 2673 223 28 18 chr5 44913794 44913849 -154716301 + L1M4c LINE L1 3016 3069 -3313 913 206 6 0 chr5 44913849 44914019 -154716131 + FRAM SINE Alu 1 170 -6 1688 179 116 45 chr5 44914021 44914573 -154715577 + L1M4c LINE L1 3053 3643 -2739 305 320 56 0 chr5 44914587 44914712 -154715438 - L1 LINE L1 -3501 2645 2514 756 156 0 62 chr5 44914809 44914969 -154715181 + L1MA3 LINE L1 3649 3798 -2584 5166 175 23 81 chr5 44914982 44915136 -154715014 + L1 LINE L1 4328 4489 -1893 2204 123 0 0 chr5 44915136 44915436 -154714714 + AluSx SINE Alu 1 300 -12 5166 175 23 81 chr5 44915436 44916125 -154714025 + L1 LINE L1 4489 5216 -1166 2136 120 0 10 chr5 44916125 44916456 -154713694 + AluSg SINE Alu 1 310 0 2172 135 0 0 chr5 44916465 44916769 -154713381 + AluSg SINE Alu 1 304 -6 5166 175 23 81 chr5 44916769 44916785 -154713365 + L1 LINE L1 5224 5239 -1143 2107 113 14 3 chr5 44916785 44917077 -154713073 + AluSg SINE Alu 5 299 -11 5166 175 23 81 chr5 44917077 44917597 -154712553 + L1 LINE L1 5239 5639 -743 1873 174 69 48 chr5 44917602 44917827 -154712323 - MSTA LTR MaLR 0 428 188 2237 116 0 0 chr5 44917827 44918120 -154712030 + AluSx SINE Alu 3 295 -17 1873 174 69 48 chr5 44918120 44918313 -154711837 - MSTA LTR MaLR -240 188 1 8959 184 11 11 chr5 44918313 44919964 -154710186 - MSTA-int LTR MaLR 0 1651 1 1319 149 14 9 chr5 44919964 44920178 -154709972 - MSTB LTR MaLR 0 426 212 8837 188 44 28 chr5 44920182 44922857 -154707293 + L1MA3 LINE L1 3788 6513 -28 222 241 19 0 chr5 44923498 44923552 -154706598 - L2 LINE L2 -37 3235 3181 2242 117 0 0 chr5 44924556 44924856 -154705294 - AluSx SINE Alu -12 300 1 2011 120 0 10 chr5 44924919 44925211 -154704939 - AluSx SINE Alu -18 294 6 346 249 111 35 chr5 44926035 44926110 -154704040 - L1ME4a LINE L1 -5 6116 6048 2306 94 0 3 chr5 44926110 44926409 -154703741 - AluSc SINE Alu -11 298 1 346 249 111 35 chr5 44926409 44926783 -154703367 - L1ME4a LINE L1 -73 6048 5603 26 50 0 0 chr5 44926819 44926859 -154703291 + AT_rich Low_complexity Low_complexity 1 40 0 616 126 0 0 chr5 44928276 44928371 -154701779 - AluSg/x SINE Alu 0 310 216 195 42 0 0 chr5 44928634 44928658 -154701492 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 429 371 70 40 chr5 44929477 44929749 -154700401 + L2 LINE L2 2985 3264 -8 463 364 62 18 chr5 44929814 44930086 -154700064 - L2 LINE L2 -181 3091 2808 391 230 23 11 chr5 44931043 44931130 -154699020 - MER81 DNA DNA -22 92 5 21 0 0 0 chr5 44931442 44931463 -154698687 + AT_rich Low_complexity Low_complexity 1 21 0 299 233 80 49 chr5 44932056 44932219 -154697931 - L1M4 LINE L1 -3320 2826 2659 251 341 45 23 chr5 44932268 44932400 -154697750 - L1MEd LINE L1 -5799 320 186 476 265 123 51 chr5 44932494 44933046 -154697104 - L1ME2 LINE L1 -95 6069 5470 461 329 95 25 chr5 44933632 44933875 -154696275 - MIR SINE MIR 0 262 3 747 249 112 17 chr5 44935038 44935271 -154694879 - MIR SINE MIR 0 262 8 213 193 0 35 chr5 44935282 44935339 -154694811 + (TA)n Simple_repeat Simple_repeat 1 55 0 2132 108 3 16 chr5 44935413 44935718 -154694432 - AluSx SINE Alu -11 301 1 640 311 228 34 chr5 44935729 44937110 -154693040 - L2 LINE L2 -407 2907 1073 2330 93 3 0 chr5 44937110 44937412 -154692738 - AluSc SINE Alu -2 307 5 640 311 228 34 chr5 44937412 44937709 -154692441 - L2 LINE L2 -2241 1073 835 24 53 0 0 chr5 44937971 44938009 -154692141 + AT_rich Low_complexity Low_complexity 1 38 0 254 200 0 46 chr5 44938029 44938094 -154692056 + L1MC4 LINE L1 6652 6713 -1329 484 314 35 45 chr5 44938608 44938895 -154691255 + MER102a DNA MER1_type 38 321 -9 1846 159 3 20 chr5 44939926 44940221 -154689929 + AluJo SINE Alu 1 290 -22 282 56 0 0 chr5 44940221 44940257 -154689893 + (TA)n Simple_repeat Simple_repeat 2 37 0 1302 127 0 0 chr5 44941136 44941309 -154688841 + AluSx SINE Alu 20 192 -120 1899 139 42 0 chr5 44941439 44941727 -154688423 - AluSg SINE Alu -10 300 1 405 299 82 16 chr5 44942682 44942876 -154687274 - MIR SINE MIR -50 212 6 23 0 0 0 chr5 44943538 44943561 -154686589 + AT_rich Low_complexity Low_complexity 1 23 0 2806 113 27 7 chr5 44944394 44944838 -154685312 - L1PA13 LINE L1 -2 6161 5709 961 141 42 5 chr5 44945509 44945700 -154684450 - L1 LINE L1 -787 5359 5162 1643 151 4 4 chr5 44945700 44945975 -154684175 + L1PA16 LINE L1 5884 6162 -4 486 307 0 0 chr5 44946220 44946347 -154683803 - L2 LINE L2 -5 3308 3182 589 316 81 0 chr5 44946492 44946701 -154683449 - MIR SINE MIR -20 242 17 243 0 0 0 chr5 44946820 44946847 -154683303 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2255 19 0 0 chr5 44946847 44947107 -154683043 - L1PA5 LINE L1 -11 6143 5884 1031 25 0 0 chr5 44947107 44947226 -154682924 + L1PA5 LINE L1 5762 5880 -275 387 270 80 43 chr5 44947262 44947425 -154682725 - MER5A DNA MER1_type 0 189 21 2183 122 53 46 chr5 44947532 44947707 -154682443 + L1MA4 LINE L1 5887 6059 -241 2307 96 0 0 chr5 44947707 44947999 -154682151 + AluSc SINE Alu 6 297 -12 2183 122 53 46 chr5 44947999 44948234 -154681916 + L1MA4 LINE L1 6059 6300 0 295 186 94 86 chr5 44948741 44948892 -154681258 - L1MC4 LINE L1 -145 7897 7636 2130 118 23 3 chr5 44948943 44949247 -154680903 + AluSx SINE Alu 1 310 -2 2382 158 25 0 chr5 44949267 44949671 -154680479 - L1MC1 LINE L1 -4 6329 5916 629 244 65 6 chr5 44951430 44951598 -154678552 - MER63A DNA MER1_type -28 182 5 2084 107 4 4 chr5 44951787 44952094 -154678056 - AluSp SINE Alu 0 309 3 183 42 0 0 chr5 44952099 44952123 -154678027 + (T)n Simple_repeat Simple_repeat 1 24 0 202 200 25 0 chr5 44953000 44953040 -154677110 - L2 LINE L2 -2 3311 3271 322 318 110 12 chr5 44953105 44953278 -154676872 + L2 LINE L2 3124 3313 0 323 252 56 42 chr5 44954220 44954363 -154675787 + MIR SINE MIR 69 213 -49 509 328 134 0 chr5 44955484 44955685 -154674465 + MIR SINE MIR 35 262 0 1991 140 0 3 chr5 44955725 44956018 -154674132 - AluSx SINE Alu -12 300 9 235 354 31 31 chr5 44957522 44957683 -154672467 + MER5A DNA MER1_type 8 168 -21 * 304 301 56 42 chr5 44957544 44957687 -154672463 - MER5B DNA MER1_type -16 162 18 2198 118 0 28 chr5 44958363 44958684 -154671466 - AluSx SINE Alu 0 312 1 655 223 82 68 chr5 44959748 44959969 -154670181 - L1ME LINE L1 -498 5672 5456 198 0 0 0 chr5 44959969 44959991 -154670159 + (TA)n Simple_repeat Simple_repeat 2 23 0 1851 171 0 3 chr5 44959991 44960284 -154669866 - AluSx SINE Alu -20 292 1 655 223 82 68 chr5 44960284 44960445 -154669705 - L1ME LINE L1 -713 5457 5276 2913 93 2 41 chr5 44960464 44960709 -154669441 - L1PB1 LINE L1 -7 6144 5920 2211 114 0 23 chr5 44960709 44961017 -154669133 - AluSg SINE Alu -8 302 2 2913 93 2 41 chr5 44961017 44961188 -154668962 - L1PB1 LINE L1 -231 5920 5744 234 181 21 96 chr5 44961235 44961329 -154668821 + L1M4 LINE L1 3140 3226 -2920 2234 105 3 0 chr5 44961411 44961705 -154668445 - AluSc SINE Alu -14 295 1 419 164 60 0 chr5 44961743 44961844 -154668306 - AluSp/q SINE Alu 0 317 213 241 301 34 61 chr5 44962259 44962464 -154667686 - L1MEd LINE L1 -4881 1238 1044 2053 145 26 0 chr5 44962464 44962767 -154667383 - AluSx SINE Alu -1 311 1 241 301 34 61 chr5 44962767 44962887 -154667263 - L1MEd LINE L1 -5075 1044 922 290 45 23 0 chr5 44962899 44962943 -154667207 + (TA)n Simple_repeat Simple_repeat 1 45 0 2064 139 7 3 chr5 44962943 44963253 -154666897 - AluSq SINE Alu -2 311 1 811 133 78 33 chr5 44963304 44963484 -154666666 - L1MC2 LINE L1 0 6344 6157 22 0 0 0 chr5 44963484 44963506 -154666644 + AT_rich Low_complexity Low_complexity 1 22 0 390 198 26 4 chr5 44963527 44963618 -154666532 - L1MA6 LINE L1 -50 6253 6165 22 0 0 0 chr5 44963653 44963675 -154666475 + AT_rich Low_complexity Low_complexity 1 22 0 346 273 0 0 chr5 44964467 44964555 -154665595 - L1PB4 LINE L1 -8 6148 6061 863 191 5 113 chr5 44964851 44964934 -154665216 + FAM SINE Alu 1 4294967212 -269 7467 57 0 0 chr5 44964934 44966203 -154663947 - L1PA8 LINE L1 -2 6170 4879 863 191 5 113 chr5 44966203 44966323 -154663827 + FAM SINE Alu -85 46 -3 1000 125 80 0 chr5 44968384 44968560 -154661590 - L1MB3 LINE L1 0 6183 5994 2354 78 0 10 chr5 44968763 44969059 -154661091 - AluY SINE Alu -18 293 1 1152 183 31 58 chr5 44969193 44969417 -154660733 - MER20 DNA MER1_type -1 218 1 1138 173 81 8 chr5 44969432 44969680 -154660470 - L1MD3 LINE L1 0 7995 7730 2192 101 10 10 chr5 44969708 44970005 -154660145 - AluSx SINE Alu -15 297 1 1015 255 118 42 chr5 44971675 44972150 -154658000 - LTR33 LTR ERVL -7 514 4 2104 144 0 3 chr5 44972193 44972505 -154657645 + AluJb SINE Alu 1 311 -1 2016 143 0 0 chr5 44973215 44973501 -154656649 - AluSx SINE Alu -6 306 21 1308 238 120 27 chr5 44974473 44974948 -154655202 + MER113 DNA MER1_type? 2 520 -1 223 265 137 0 chr5 44974962 44975064 -154655086 + MIR3 SINE MIR 81 196 -12 352 323 15 15 chr5 44976135 44976265 -154653885 + MIR3 SINE MIR 66 195 -13 2187 106 3 7 chr5 44976485 44976786 -154653364 - AluSq SINE Alu -13 300 1 188 290 32 0 chr5 44977392 44977454 -154652696 + L3 LINE CR1 1300 1363 -214 249 254 34 0 chr5 44977556 44977615 -154652535 - LTR16C LTR ERVL -18 473 413 2336 179 26 0 chr5 44978988 44979374 -154650776 - MSTD LTR MaLR 0 396 1 246 224 30 0 chr5 44979473 44979540 -154650610 + (CA)n Simple_repeat Simple_repeat 2 70 0 207 226 38 0 chr5 44979701 44979754 -154650396 + GA-rich Low_complexity Low_complexity 5 59 0 1888 187 55 25 chr5 44981660 44982023 -154648127 - MLT1A2 LTR MaLR 0 374 1 688 199 142 0 chr5 44982401 44982542 -154647608 - ERVL-B1 LTR ERVL -5503 261 101 328 125 0 0 chr5 44982616 44982664 -154647486 - MLT2B1 LTR ERVL -8 512 465 39 0 0 0 chr5 44982686 44982725 -154647425 + AT_rich Low_complexity Low_complexity 1 39 0 363 281 133 33 chr5 44982726 44982936 -154647214 - L1MEc LINE L1 -5402 994 764 1070 295 75 33 chr5 44983028 44983537 -154646613 - L1MEc LINE L1 -5836 560 31 1772 171 7 7 chr5 44983635 44983940 -154646210 - AluJo SINE Alu -7 305 1 2232 118 3 9 chr5 44984101 44984416 -154645734 - AluSp SINE Alu 0 313 1 327 113 0 0 chr5 44985316 44985369 -154644781 + (CA)n Simple_repeat Simple_repeat 2 54 0 2307 107 7 116 chr5 44986179 44986600 -154643550 - THE1C LTR MaLR 0 375 1 11326 109 34 9 chr5 44986600 44988141 -154642009 - THE1C-int LTR MaLR 0 1580 1 2689 131 5 0 chr5 44988141 44988514 -154641636 - THE1C LTR MaLR 0 375 1 543 243 141 23 chr5 44989009 44989060 -154641090 - MIR SINE MIR -10 252 208 1691 181 60 26 chr5 44989060 44989408 -154640742 + MLT1A1 LTR MaLR 2 361 -4 543 243 141 23 chr5 44989408 44989533 -154640617 - MIR SINE MIR -54 208 55 288 250 0 0 chr5 44989816 44989888 -154640262 - MER3 DNA MER1_type 0 209 138 691 199 39 19 chr5 44989921 44990077 -154640073 - MER3 DNA MER1_type -49 160 2 704 197 20 14 chr5 44990296 44990443 -154639707 - MLT1F LTR MaLR 0 542 395 733 190 86 0 chr5 44990449 44990623 -154639527 + MER53 DNA DNA 1 189 0 * 1545 231 71 22 chr5 44990623 44990997 -154639153 - MLT1F LTR MaLR -142 400 7 443 264 16 16 chr5 44991027 44991148 -154639002 + L2 LINE L2 3192 3312 -1 2189 124 0 10 chr5 44991377 44991684 -154638466 + AluSx SINE Alu 1 304 -8 2149 121 3 19 chr5 44995772 44996086 -154634064 + AluSx SINE Alu 1 309 -3 320 281 31 16 chr5 44996620 44996748 -154633402 - MIR3 SINE MIR -26 182 53 2362 94 0 0 chr5 44997304 44997603 -154632547 - AluSq SINE Alu -14 299 1 477 317 36 55 chr5 44997917 44998226 -154631924 + L3b LINE CR1 1146 1448 -135 316 235 0 29 chr5 44998275 44998343 -154631807 - MER58 DNA MER1_type 0 2420 2355 455 311 31 12 chr5 44998369 44998530 -154631620 - LTR16C LTR ERVL -239 252 89 2193 109 6 10 chr5 45000091 45000403 -154629747 + AluSx SINE Alu 1 311 -1 6024 86 7 5 chr5 45000489 45001303 -154628847 + L1PB1 LINE L1 5304 6119 -32 2393 89 7 0 chr5 45001406 45001710 -154628440 + L1PB1 LINE L1 5846 6151 0 204 86 57 0 chr5 45001968 45002003 -154628147 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 804 206 85 155 chr5 45002443 45002797 -154627353 + HsTC2 DNA Tc2 1 329 -1569 483 244 25 46 chr5 45002779 45002976 -154627174 + HsTC2 DNA Tc2 1706 1898 0 * 2023 87 65 43 chr5 45005345 45005668 -154624482 + L1MC1 LINE L1 6004 6333 0 283 191 147 0 chr5 45006143 45006211 -154623939 + L2 LINE L2 3221 3298 -15 2147 142 0 0 chr5 45006376 45006685 -154623465 - AluSx SINE Alu -3 309 1 219 295 16 0 chr5 45008471 45008532 -154621618 - MIR SINE MIR -6 256 195 381 357 20 20 chr5 45008568 45008757 -154621393 + L2 LINE L2 2546 2734 -580 337 320 21 0 chr5 45008757 45008854 -154621296 - MER91B DNA MER1_type 0 190 92 374 276 8 82 chr5 45008870 45009004 -154621146 - MER91B DNA MER1_type -63 127 4 587 248 270 13 chr5 45009006 45009045 -154621105 + L2 LINE L2 2724 2752 -561 1990 50 4 23 chr5 45009045 45009329 -154620821 + L1PA4 LINE L1 5889 6167 0 587 248 270 13 chr5 45009329 45009708 -154620442 + L2 LINE L2 2752 3313 0 657 299 28 31 chr5 45010318 45010572 -154619578 - MIR SINE MIR -8 254 2 231 291 119 37 chr5 45010781 45010915 -154619235 + MIR SINE MIR 2 146 -116 1809 110 100 7 chr5 45011215 45011496 -154618654 - AluSq SINE Alu -6 307 1 1801 111 100 7 chr5 45012034 45012314 -154617836 - AluSq SINE Alu -7 306 1 355 127 48 16 chr5 45012545 45012608 -154617542 + L2 LINE L2 3241 3305 -8 241 211 18 0 chr5 45013304 45013423 -154616727 + GA-rich Low_complexity Low_complexity 1 121 0 255 114 0 0 chr5 45015003 45015047 -154615103 + (GA)n Simple_repeat Simple_repeat 1 44 0 409 314 129 33 chr5 45015495 45015705 -154614445 - L1ME1 LINE L1 -7 6159 5930 780 180 60 9 chr5 45015777 45015994 -154614156 + Charlie5 DNA MER1_type 2357 2584 -28 352 318 53 69 chr5 45016085 45016274 -154613876 + L2 LINE L2 3082 3267 -5 238 267 69 15 chr5 45016318 45016449 -154613701 + L1ME LINE L1 5690 5827 -294 3232 203 49 38 chr5 45016451 45017255 -154612895 + L1M3 LINE L1 3985 4802 -1344 1789 173 7 0 chr5 45017255 45017555 -154612595 + AluJb SINE Alu 1 302 -10 3232 203 49 38 chr5 45017555 45017663 -154612487 + L1M3 LINE L1 4802 4907 -1239 39888 61 3 1 chr5 45017733 45023855 -154606295 + L1PA5 LINE L1 11 6148 -6 3786 182 20 61 chr5 45023855 45024453 -154605697 - L1MA9 LINE L1 -73 6239 5713 841 135 7 7 chr5 45024453 45024594 -154605556 - L1PB3 LINE L1 0 6154 6014 3786 182 20 61 chr5 45024594 45025166 -154604984 - L1MA9 LINE L1 -599 5713 5119 1788 197 26 36 chr5 45025185 45025452 -154604698 + L1M3 LINE L1 4892 5160 -1023 972 148 62 6 chr5 45025452 45025628 -154604522 + L1PA16 LINE L1 5979 6164 -2 1788 197 26 36 chr5 45025628 45025961 -154604189 + L1M3 LINE L1 5160 5486 -697 * 1948 201 76 4 chr5 45025958 45026470 -154603680 + L1 LINE L1 4288 4836 -1310 483 141 22 0 chr5 45026482 45026574 -154603576 + L1MB2 LINE L1 6074 6167 -4 281 208 218 41 chr5 45026604 45026742 -154603408 + L1ME4a LINE L1 5819 5931 -190 1722 128 51 90 chr5 45026742 45027132 -154603018 - THE1C LTR MaLR 0 375 1 281 208 218 41 chr5 45027132 45027190 -154602960 + L1ME4a LINE L1 5931 6050 -71 4062 155 39 4 chr5 45027243 45027971 -154602179 - L1PA15 LINE L1 0 6165 5413 21 0 0 0 chr5 45027983 45028004 -154602146 + AT_rich Low_complexity Low_complexity 1 21 0 363 286 137 9 chr5 45029040 45029267 -154600883 + MER112 DNA MER1_type 1 256 0 441 0 0 0 chr5 45029441 45029490 -154600660 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr5 45030296 45030318 -154599832 + AT_rich Low_complexity Low_complexity 1 22 0 3932 153 138 29 chr5 45030319 45031471 -154598679 + L1PA16 LINE L1 4200 5226 -940 188 0 74 0 chr5 45031471 45031498 -154598652 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3932 153 138 29 chr5 45031498 45031789 -154598361 + L1PA16 LINE L1 5226 5484 -682 216 0 0 0 chr5 45031789 45031813 -154598337 + (CA)n Simple_repeat Simple_repeat 2 25 0 3932 153 138 29 chr5 45031813 45031829 -154598321 + L1PA16 LINE L1 5484 5497 -669 1958 126 105 18 chr5 45031829 45032163 -154597987 + THE1B LTR MaLR 2 364 0 3932 153 138 29 chr5 45032163 45032457 -154597693 + L1PA16 LINE L1 5497 6162 -4 289 193 0 0 chr5 45032694 45032751 -154597399 - AluJo SINE Alu -1 301 245 576 253 0 32 chr5 45032751 45032905 -154597245 - AluJo SINE Alu -143 169 21 261 148 65 0 chr5 45032918 45032972 -154597178 - FLAM SINE Alu -8 125 78 321 289 128 45 chr5 45033021 45033177 -154596973 - MER5A DNA MER1_type 0 189 21 207 388 0 0 chr5 45033331 45033398 -154596752 - L2 LINE L2 -92 3180 3114 196 339 36 0 chr5 45033419 45033475 -154596675 + MER5A DNA MER1_type 43 100 -89 232 301 36 24 chr5 45033664 45033747 -154596403 - L2 LINE L2 -378 2936 2853 201 214 54 18 chr5 45033790 45033846 -154596304 - L2 LINE L2 -1 3312 3255 352 96 100 19 chr5 45034151 45034249 -154595901 - L1PA16 LINE L1 -233 5898 5793 397 143 0 0 chr5 45034259 45034322 -154595828 - THE1A LTR MaLR 0 355 293 1133 250 87 70 chr5 45035252 45035859 -154594291 - L2 LINE L2 0 3313 2687 2262 106 3 3 chr5 45036323 45036624 -154593526 - AluSg SINE Alu -9 301 1 2013 115 11 0 chr5 45037006 45037308 -154592842 + AluSx SINE Alu 1 305 0 282 283 80 29 chr5 45037864 45038002 -154592148 + L3b LINE CR1 1115 1259 -324 2076 147 0 3 chr5 45038259 45038566 -154591584 - AluSx SINE Alu -6 306 1 1157 223 90 10 chr5 45039309 45039609 -154590541 + MLT1H LTR MaLR 1 324 -225 2279 81 0 42 chr5 45039619 45039928 -154590222 + AluSc SINE Alu 1 296 -13 554 241 58 0 chr5 45039964 45040101 -154590049 + MLT1H LTR MaLR 405 549 0 536 310 30 30 chr5 45040536 45040733 -154589417 - MIR SINE MIR -16 246 50 680 281 86 31 chr5 45041088 45041380 -154588770 + MLT1J LTR MaLR 11 318 -193 25 65 0 0 chr5 45041582 45041628 -154588522 + AT_rich Low_complexity Low_complexity 1 46 0 296 264 22 44 chr5 45042538 45042629 -154587521 - MER5B DNA MER1_type 0 178 90 210 267 44 44 chr5 45042563 45042653 -154587497 + MER5A DNA MER1_type 37 126 -63 * 483 244 62 28 chr5 45045328 45045504 -154584646 - MER20B DNA MER1_type -595 188 7 473 313 21 7 chr5 45045984 45046128 -154584022 - MER5A DNA MER1_type 0 189 44 334 236 34 22 chr5 45046221 45046310 -154583840 - MER5A DNA MER1_type -55 134 45 25 0 0 0 chr5 45046390 45046415 -154583735 + AT_rich Low_complexity Low_complexity 1 25 0 1324 214 81 3 chr5 45047175 45047483 -154582667 + MLT1A1 LTR MaLR 6 337 -28 270 146 0 0 chr5 45047668 45047709 -154582441 + MLT1A1 LTR MaLR 325 365 0 40 0 0 0 chr5 45047977 45048017 -154582133 + AT_rich Low_complexity Low_complexity 1 40 0 1380 127 20 57 chr5 45048387 45048632 -154581518 - MER46A DNA MER2_type 0 236 1 568 251 21 10 chr5 45048818 45049076 -154581074 + MER46C DNA MER2_type 8 309 -29 2099 135 0 0 chr5 45049647 45049936 -154580214 - AluSx SINE Alu -18 294 6 283 261 63 9 chr5 45050882 45050993 -154579157 - MER104 DNA Tc2 -5 175 59 669 150 110 29 chr5 45051737 45051910 -154578240 + MLT1C LTR MaLR 65 251 -216 2185 108 0 7 chr5 45053225 45053520 -154576630 - AluSx SINE Alu -19 293 1 1341 132 5 10 chr5 45054113 45054301 -154575849 - AluSq SINE Alu -6 307 119 192 40 0 0 chr5 45054301 45054326 -154575824 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1341 132 5 10 chr5 45054326 45054341 -154575809 - AluSq SINE Alu -194 119 105 214 302 21 99 chr5 45054356 45054431 -154575719 + L2 LINE L2 1639 1718 -1596 2160 106 0 7 chr5 45054431 45054733 -154575417 + AluSx SINE Alu 6 305 -7 214 302 21 99 chr5 45054733 45054899 -154575251 + L2 LINE L2 1718 1861 -1453 251 164 66 0 chr5 45055158 45055225 -154574925 - MLT1G1 LTR MaLR 0 571 478 696 351 107 41 chr5 45055321 45056171 -154573979 + L2 LINE L2 1980 2885 -429 446 305 13 40 chr5 45056913 45057064 -154573086 + L2 LINE L2 3167 3313 0 738 237 96 19 chr5 45057518 45058189 -154571961 + L1ME3A LINE L1 5374 6170 0 21 0 0 0 chr5 45058252 45058273 -154571877 + AT_rich Low_complexity Low_complexity 1 21 0 211 368 28 19 chr5 45058517 45058623 -154571527 + L2 LINE L2 3123 3229 -43 216 143 0 0 chr5 45058653 45058695 -154571455 + (TGGA)n Simple_repeat Simple_repeat 4 45 0 866 292 32 12 chr5 45058955 45059205 -154570945 + MIR SINE MIR 3 257 -5 280 280 21 0 chr5 45059217 45059310 -154570840 + L3b LINE CR1 1310 1404 -179 288 306 149 0 chr5 45059332 45059466 -154570684 - MIR3 SINE MIR -18 190 37 596 274 44 38 chr5 45059786 45060025 -154570125 + MIR SINE MIR 15 262 0 294 170 0 0 chr5 45060483 45060530 -154569620 - tRNA-Gly-GGA tRNA tRNA -28 47 1 408 175 10 58 chr5 45061246 45061349 -154568801 - L1PB4 LINE L1 0 6156 6059 309 313 88 48 chr5 45062442 45062589 -154567561 + MIR3 SINE MIR 34 186 -22 189 125 0 0 chr5 45062579 45062611 -154567539 + MIR SINE MIR 108 139 -123 * 2233 117 0 3 chr5 45063023 45063330 -154566820 - AluSp SINE Alu -7 306 1 427 329 100 4 chr5 45064026 45064257 -154565893 - MIR SINE MIR -8 254 2 495 302 59 12 chr5 45064452 45064621 -154565529 + MER5B DNA MER1_type 2 178 0 414 311 79 59 chr5 45064662 45064916 -154565234 + MIR SINE MIR 1 259 -3 183 261 0 0 chr5 45065518 45065564 -154564586 + L2 LINE L2 3137 3182 -90 515 294 51 23 chr5 45067571 45067748 -154562402 + MER5A DNA MER1_type 8 189 0 21 0 0 0 chr5 45068735 45068756 -154561394 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 45068850 45068872 -154561278 + AT_rich Low_complexity Low_complexity 1 22 0 43799 45 1 1 chr5 45068940 45075091 -154555059 - L1PA4 LINE L1 -3 6152 1 314 295 13 34 chr5 45075195 45075344 -154554806 + CT-rich Low_complexity Low_complexity 5 150 0 197 358 49 16 chr5 45075398 45075521 -154554629 - L2 LINE L2 -8 3264 3138 23 0 0 0 chr5 45075795 45075818 -154554332 + AT_rich Low_complexity Low_complexity 1 23 0 5780 159 15 7 chr5 45075823 45077605 -154552545 - L1PB3 LINE L1 -7 6147 4350 254 333 83 42 chr5 45077743 45077839 -154552311 + MIR3 SINE MIR 15 122 -86 2598 121 0 0 chr5 45077839 45078203 -154551947 + THE1B LTR MaLR 1 364 0 254 333 83 42 chr5 45078203 45078274 -154551876 + MIR3 SINE MIR 122 189 -19 1477 189 75 62 chr5 45078381 45078768 -154551382 + MSTD LTR MaLR 5 396 0 1541 142 6 119 chr5 45079157 45079494 -154550656 + AluJb SINE Alu 1 299 -3 217 208 0 21 chr5 45080628 45080676 -154549474 + MIR SINE MIR 95 141 -121 3841 248 68 29 chr5 45080942 45081342 -154548808 - L1MEc LINE L1 -4907 1489 1106 2023 143 0 0 chr5 45081342 45081643 -154548507 - AluSx SINE Alu -11 301 1 3841 248 68 29 chr5 45081643 45082643 -154547507 - L1MEc LINE L1 -5290 1106 35 454 296 61 58 chr5 45082809 45083170 -154546980 - MLT1J LTR MaLR -49 462 62 633 247 28 36 chr5 45084035 45084282 -154545868 - L1MC5 LINE L1 -13 7948 7704 252 217 77 84 chr5 45084309 45084414 -154545736 - L1MC5 LINE L1 -327 7634 7529 2567 56 0 3 chr5 45084414 45084716 -154545434 - AluY SINE Alu -10 301 1 252 217 77 84 chr5 45084716 45084753 -154545397 - L1MC5 LINE L1 -432 7529 7493 634 350 129 33 chr5 45085481 45086079 -154544071 - L3 LINE CR1 -89 1488 834 6871 47 1 2 chr5 45086089 45086933 -154543217 + L1PA7 LINE L1 5311 6153 -1 1762 252 53 31 chr5 45086944 45087456 -154542694 + L1M3e LINE L1 1 523 -6507 1832 231 138 2 chr5 45087490 45088099 -154542051 + L1M3e LINE L1 1830 2521 -4516 215 323 47 24 chr5 45089026 45089153 -154540997 - MIR SINE MIR -46 216 87 205 363 0 11 chr5 45090143 45090234 -154539916 + L2 LINE L2 3206 3295 -18 751 277 128 28 chr5 45090574 45090971 -154539179 + MLT1J LTR MaLR 6 442 -69 2632 179 37 7 chr5 45091399 45091857 -154538293 + MER70A LTR ERVL 1 472 0 388 315 18 59 chr5 45092337 45092559 -154537591 + Charlie8 DNA MER1_type 96 308 -2109 376 285 180 76 chr5 45093205 45093689 -154536461 - MLT1H LTR MaLR -14 535 2 556 296 58 27 chr5 45095900 45096228 -154533922 - L1ME LINE L1 -413 5749 5412 989 135 83 65 chr5 45096262 45096491 -154533659 - THE1C LTR MaLR 0 375 143 225 183 0 84 chr5 45096542 45096613 -154533537 - L1MEd LINE L1 -2161 3968 3904 302 289 83 25 chr5 45096656 45096898 -154533252 - L1MEd LINE L1 -2301 3828 3573 1575 116 107 77 chr5 45096908 45097235 -154532915 + MER1B DNA MER1_type 1 337 0 376 252 92 38 chr5 45097255 45097517 -154532633 - L1MEd LINE L1 -2613 3516 3241 423 293 37 37 chr5 45097728 45098022 -154532128 - L1MEd LINE L1 -3152 2977 2684 276 323 48 0 chr5 45098380 45098566 -154531584 - L1MEd LINE L1 -3600 2529 2335 578 179 77 0 chr5 45098642 45098759 -154531391 - L1PB4 LINE L1 -19 6137 6012 570 284 40 36 chr5 45098981 45099282 -154530868 - L1MEd LINE L1 -841 1649 1405 2045 114 4 0 chr5 45099322 45099602 -154530548 - AluSq SINE Alu -32 281 1 568 301 98 57 chr5 45099602 45100208 -154529942 - L1MEd LINE L1 -4872 1247 682 5651 153 17 2 chr5 45100844 45101797 -154528353 - L1MC2 LINE L1 -23 6321 5355 271 292 58 8 chr5 45101791 45101911 -154528239 + L1MC4a LINE L1 5609 5734 -387 * 333 0 0 0 chr5 45101944 45101981 -154528169 + (GA)n Simple_repeat Simple_repeat 2 38 0 23 0 0 0 chr5 45102227 45102250 -154527900 + AT_rich Low_complexity Low_complexity 1 23 0 5214 102 12 9 chr5 45102252 45103030 -154527120 - L1PB2 LINE L1 -7 6144 5365 238 69 0 0 chr5 45103030 45103059 -154527091 - U2 snRNA snRNA -153 35 7 4912 195 11 57 chr5 45103067 45103671 -154526479 - L1PB2 LINE L1 -769 5377 4747 2278 85 0 14 chr5 45103671 45103965 -154526185 - AluY SINE Alu -19 292 3 4912 195 11 57 chr5 45103965 45104387 -154525763 - L1PB2 LINE L1 -1399 4747 4422 297 0 0 0 chr5 45104387 45104420 -154525730 + (CA)n Simple_repeat Simple_repeat 2 34 0 4912 195 11 57 chr5 45104420 45104707 -154525443 - L1PB2 LINE L1 -1724 4422 4123 804 246 48 68 chr5 45105036 45105434 -154524716 - MLT1B LTR MaLR 0 390 1 264 286 18 9 chr5 45105490 45105602 -154524548 + L1MC4a LINE L1 5820 5932 -1876 1977 105 4 8 chr5 45105884 45106151 -154523999 - AluSx SINE Alu -18 294 29 293 250 38 0 chr5 45106496 45106576 -154523574 + CT-rich Low_complexity Low_complexity 4 86 0 1080 266 44 12 chr5 45106987 45107307 -154522843 + HERV16 LTR ERVL 963 1292 -3704 1142 283 95 41 chr5 45107375 45108531 -154521619 + HERV16 LTR ERVL 1689 2924 -2072 941 308 86 15 chr5 45109517 45109913 -154520237 + LTR16B LTR ERVL 35 458 -6 479 357 77 12 chr5 45109929 45110254 -154519896 - L1MEc LINE L1 -4131 2265 1920 285 300 37 45 chr5 45110371 45110614 -154519536 - L1MEc LINE L1 -4653 1743 1503 302 91 18 0 chr5 45110673 45110728 -154519422 + (TTTTTG)n Simple_repeat Simple_repeat 6 61 0 259 287 120 5 chr5 45111306 45111515 -154518635 - L1MEc LINE L1 -4971 1234 1002 289 320 13 0 chr5 45112703 45112781 -154517369 - L3 LINE CR1 -621 956 878 2300 117 0 0 chr5 45113498 45113807 -154516343 + AluSx SINE Alu 3 311 -1 343 229 42 110 chr5 45114283 45114329 -154515821 + MIR SINE MIR 21 69 -139 2051 157 0 0 chr5 45114329 45114635 -154515515 - AluSx SINE Alu -6 306 1 343 229 42 110 chr5 45114635 45114706 -154515444 + MIR SINE MIR 69 130 -78 627 311 250 11 chr5 45114745 45115125 -154515025 + L2 LINE L2 2434 2904 -410 2101 122 3 35 chr5 45115185 45115504 -154514646 - AluSc SINE Alu 0 309 1 285 29 0 0 chr5 45115560 45115595 -154514555 - tRNA-Cys-TGC tRNA tRNA -38 37 3 269 240 260 20 chr5 45115706 45115806 -154514344 - L2 LINE L2 -37 3276 3153 278 298 24 0 chr5 45115904 45115988 -154514162 + L2 LINE L2 3187 3272 0 825 136 0 8 chr5 45116084 45116216 -154513934 + FLAM_C SINE Alu 2 132 -1 534 138 73 24 chr5 45116953 45117076 -154513074 - L1MB7 LINE L1 0 6184 6056 2150 121 0 31 chr5 45117386 45117708 -154512442 - AluSx SINE Alu 0 312 1 1053 264 122 81 chr5 45117854 45118537 -154511613 - MER50 LTR ERV1 -23 711 1 462 344 40 54 chr5 45118791 45119140 -154511010 + L2 LINE L2 2876 3219 -94 678 205 0 8 chr5 45119293 45119415 -154510735 - FLAM_A SINE Alu -12 121 1 182 360 82 20 chr5 45119677 45119824 -154510326 + L2 LINE L2 2338 2493 -821 556 300 17 6 chr5 45121383 45121563 -154508587 + MIR SINE MIR 81 262 0 397 303 9 9 chr5 45122406 45122515 -154507635 - MER5B DNA MER1_type -68 110 2 1682 222 4 27 chr5 45123209 45123672 -154506478 + MLT1D LTR MaLR 1 497 -8 423 203 34 0 chr5 45124754 45124872 -154505278 - L1MC4 LINE L1 -2 8040 7919 306 172 0 43 chr5 45124872 45124965 -154505185 + CT-rich Low_complexity Low_complexity 3 91 0 32 0 0 0 chr5 45124974 45125006 -154505144 + AT_rich Low_complexity Low_complexity 1 32 0 404 306 8 0 chr5 45125066 45125187 -154504963 - L1MC4 LINE L1 -124 7918 7797 2117 278 18 5 chr5 45125187 45125756 -154504394 - MLT1G LTR MaLR 0 590 15 353 329 42 18 chr5 45125831 45125998 -154504152 + MIR SINE MIR 32 202 -60 197 95 0 24 chr5 45126378 45126420 -154503730 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 6315 78 8 2 chr5 45126422 45126767 -154503383 - L1PB1 LINE L1 -13 6138 5797 225 0 0 0 chr5 45126767 45126792 -154503358 + (TA)n Simple_repeat Simple_repeat 2 26 0 6315 78 8 2 chr5 45126792 45127678 -154502472 - L1PB1 LINE L1 -354 5797 4896 840 286 60 20 chr5 45127708 45128057 -154502093 - MLT1L LTR MaLR -18 597 235 2475 57 3 0 chr5 45128338 45128637 -154501513 - AluY SINE Alu -11 300 1 765 279 69 28 chr5 45129178 45129569 -154500581 - MLT1I LTR MaLR -2 407 1 195 42 0 0 chr5 45130270 45130294 -154499856 + (TAA)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr5 45130360 45130383 -154499767 + AT_rich Low_complexity Low_complexity 1 23 0 365 259 103 17 chr5 45130383 45130499 -154499651 - MIR SINE MIR -66 196 71 239 152 22 0 chr5 45130716 45130762 -154499388 + L2 LINE L2 3226 3272 0 7611 25 16 2 chr5 45131126 45132301 -154497849 - L1PA3 LINE L1 0 6155 4972 4777 63 23 1 chr5 45135474 45136172 -154493978 - L1P LINE L1 -1017 5129 4417 4527 31 2 0 chr5 45136172 45136744 -154493406 + L1P LINE L1 3842 4414 -1732 386 254 112 6 chr5 45136756 45136925 -154493225 - L1ME4a LINE L1 -266 5855 5669 1220 98 0 0 chr5 45138034 45138207 -154491943 - MER51B LTR ERV1 -157 220 48 472 134 0 82 chr5 45138196 45138293 -154491857 - MER51A LTR ERV1 -545 89 1 * 1031 223 72 36 chr5 45138295 45138608 -154491542 + MLT1C LTR MaLR 132 379 -11 4157 134 20 33 chr5 45139079 45139815 -154490335 - LTR8A LTR ERV1 0 727 1 718 246 28 17 chr5 45140603 45140782 -154489368 + MER5A DNA MER1_type 9 189 0 623 251 0 59 chr5 45141130 45141349 -154488801 + L2 LINE L2 3103 3308 -5 206 32 32 0 chr5 45142112 45142143 -154488007 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 23 0 0 0 chr5 45142396 45142419 -154487731 + AT_rich Low_complexity Low_complexity 1 23 0 634 290 54 9 chr5 45142451 45142672 -154487478 - MIR SINE MIR -12 250 20 1868 177 3 0 chr5 45143215 45143514 -154486636 - AluJo SINE Alu -12 300 1 3783 122 9 40 chr5 45143526 45144157 -154485993 - L1PA15 LINE L1 0 6165 5554 546 281 72 48 chr5 45146866 45147325 -154482825 + L1ME4a LINE L1 5457 5926 -195 305 204 131 36 chr5 45147959 45148096 -154482054 + L1ME4a LINE L1 5956 6105 -16 1453 310 87 62 chr5 45149234 45149554 -154480596 - L2 LINE L2 -1 3271 2960 2140 122 3 3 chr5 45149554 45149849 -154480301 + AluSg SINE Alu 1 295 -15 1453 310 87 62 chr5 45149849 45150862 -154479288 - L2 LINE L2 -312 2960 1888 226 250 0 18 chr5 45150959 45150998 -154479152 + GA-rich Low_complexity Low_complexity 1 40 -15 204 40 0 0 chr5 45150998 45151023 -154479127 + (GGAGA)n Simple_repeat Simple_repeat 4 28 0 226 250 0 18 chr5 45151023 45151039 -154479111 + GA-rich Low_complexity Low_complexity 40 55 0 207 239 98 22 chr5 45151142 45151234 -154478916 - L2 LINE L2 -204 3068 2970 1415 166 6 131 chr5 45154358 45154702 -154475448 + AluJb SINE Alu 2 302 0 732 235 83 51 chr5 45156358 45156575 -154473575 - MER58A DNA MER1_type 0 224 1 761 271 59 0 chr5 45156588 45156758 -154473392 + MER5A DNA MER1_type 6 185 -4 331 309 10 0 chr5 45157748 45157845 -154472305 + (TA)n Simple_repeat Simple_repeat 2 99 0 188 317 0 0 chr5 45158321 45158381 -154471769 + MIR SINE MIR 166 225 -37 493 286 18 13 chr5 45158841 45158986 -154471164 - MIR SINE MIR -62 146 26 220 226 157 59 chr5 45161012 45161114 -154469036 - MIR SINE MIR -2 260 149 197 184 0 26 chr5 45161564 45161602 -154468548 - MIR SINE MIR -77 185 149 463 265 30 24 chr5 45162510 45162676 -154467474 + Charlie7 DNA MER1_type 370 536 -2076 2167 123 0 3 chr5 45162743 45163043 -154467107 - AluSg SINE Alu -11 299 1 222 222 0 0 chr5 45163521 45163575 -154466575 + GA-rich Low_complexity Low_complexity 3 56 0 1791 271 126 18 chr5 45164261 45165032 -154465118 - L1ME3A LINE L1 -4 6166 5313 445 376 96 0 chr5 45165093 45165311 -154464839 - MIR SINE MIR 0 262 24 858 182 10 0 chr5 45165790 45165943 -154464207 + MIR SINE MIR 104 257 -5 298 297 245 19 chr5 45165966 45166121 -154464029 - L2 LINE L2 0 3313 3124 264 290 0 10 chr5 45166349 45166449 -154463701 - HAL1b LINE L1 -600 748 650 22 56 0 0 chr5 45166465 45166501 -154463649 + AT_rich Low_complexity Low_complexity 1 36 0 7846 138 22 2 chr5 45167004 45168276 -154461874 + HSMAR2 DNA Mariner 5 1301 -1 276 130 0 0 chr5 45168735 45168781 -154461369 + (CA)n Simple_repeat Simple_repeat 2 47 0 2043 142 132 5 chr5 45168932 45169312 -154460838 - MSTA LTR MaLR 0 428 1 225 235 25 92 chr5 45169375 45169494 -154460656 - HAL1b LINE L1 -696 652 542 375 300 40 40 chr5 45169512 45169662 -154460488 - HAL1b LINE L1 -1104 244 95 32 26 0 0 chr5 45169715 45169754 -154460396 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr5 45169766 45169789 -154460361 + AT_rich Low_complexity Low_complexity 1 23 0 219 217 87 0 chr5 45170133 45170202 -154459948 + L2 LINE L2 3133 3207 -106 322 338 83 51 chr5 45170464 45170778 -154459372 - L2 LINE L2 -633 2681 2358 292 229 104 10 chr5 45170910 45171006 -154459144 - L2 LINE L2 -966 2348 2244 245 354 129 36 chr5 45172267 45172793 -154457357 + L2 LINE L2 121 695 -2619 915 119 4 183 chr5 45174471 45174706 -154455444 - 7SK RNA RNA 0 193 1 197 128 0 26 chr5 45174787 45174826 -154455324 + (TATG)n Simple_repeat Simple_repeat 1 38 0 239 336 42 17 chr5 45176584 45176703 -154453447 + MIR3 SINE MIR 81 202 -6 353 235 0 0 chr5 45177224 45177292 -154452858 - L2 LINE L2 -56 3257 3190 2514 62 0 24 chr5 45227784 45228122 -154402028 + L1PA5 LINE L1 5821 6150 -4 2134 132 0 0 chr5 45228879 45229183 -154400967 - AluSg1 SINE Alu -4 305 2 806 220 50 0 chr5 45230102 45230261 -154399889 - MER45A DNA AcHobo -11 167 1 306 306 31 0 chr5 45231959 45232057 -154398093 - MIR3 SINE MIR -5 203 103 531 289 53 0 chr5 45232406 45232563 -154397587 + MIR SINE MIR 96 259 -3 2273 84 0 0 chr5 45232874 45233159 -154396991 - AluY SINE Alu -1 310 26 40215 71 6 9 chr5 45233475 45239217 -154390933 + L1P2 LINE L1 12 5756 -398 238 251 192 2 chr5 45240678 45240765 -154389385 - MIR SINE MIR -103 105 2 759 233 41 6 chr5 45241360 45241532 -154388618 + MER58A DNA MER1_type 35 212 -12 220 328 64 80 chr5 45242822 45243300 -154386850 + L2 LINE L2 2461 2926 -346 284 260 110 0 chr5 45244288 45244361 -154385789 - L2 LINE L2 -1 3271 3191 355 254 45 60 chr5 45244592 45244726 -154385424 - L2 LINE L2 -40 3273 3142 25 0 0 0 chr5 45246776 45246801 -154383349 + AT_rich Low_complexity Low_complexity 1 25 0 685 196 7 0 chr5 45246802 45246940 -154383210 - L1M4 LINE L1 -696 5488 5350 1104 158 99 10 chr5 45246962 45247164 -154382986 - L1PA16 LINE L1 -9 6157 5938 300 312 11 91 chr5 45247242 45247428 -154382722 - HAL1 LINE L1 -2 2505 2335 3108 184 115 58 chr5 45247533 45248130 -154382020 + MER106B DNA MER1_type 2 680 -379 2276 106 0 3 chr5 45248130 45248433 -154381717 + AluSx SINE Alu 7 308 -4 3108 184 115 58 chr5 45248433 45248825 -154381325 + MER106B DNA MER1_type 680 1048 -11 550 247 75 39 chr5 45249956 45250235 -154379915 - L1MC4 LINE L1 -243 7799 7511 869 105 44 77 chr5 45250277 45250458 -154379692 - L1MA8 LINE L1 -2 6289 6115 4280 162 30 17 chr5 45250472 45251311 -154378839 - L1MB8 LINE L1 -6 6408 5559 5456 34 1 1 chr5 45251311 45251962 -154378188 - L1PA4 LINE L1 -4 6151 5501 5174 39 2 0 chr5 45251962 45252737 -154377413 + L1P2 LINE L1 4761 5538 -617 3249 153 3 12 chr5 45252720 45253284 -154376866 - L1MA8 LINE L1 -166 6125 5567 * 7343 165 19 83 chr5 45253385 45255214 -154374936 - L1MB8 LINE L1 -816 5566 3855 866 117 15 29 chr5 45255214 45255351 -154374799 + AluSg/x SINE Alu 162 296 -14 2650 227 68 67 chr5 45255352 45256086 -154374064 - L1MB8 LINE L1 -2943 3439 2690 4082 165 82 59 chr5 45256086 45257129 -154373021 + MER11C LTR ERVK 1 1067 -4 2650 227 68 67 chr5 45257129 45257718 -154372432 - L1MB8 LINE L1 -3692 2690 2103 198 389 111 0 chr5 45259079 45259205 -154370945 + L2 LINE L2 3125 3264 -8 325 262 50 57 chr5 45259356 45259497 -154370653 + MIR SINE MIR 53 192 -70 261 75 0 0 chr5 45260561 45260601 -154369549 + (T)n Simple_repeat Simple_repeat 1 40 0 7828 16 0 0 chr5 45261301 45262634 -154367516 - L1PA2 LINE L1 -3 6152 4820 16811 29 0 0 chr5 45262634 45264654 -154365496 + L1PA2 LINE L1 2824 4843 -1303 667 205 149 96 chr5 45264863 45265185 -154364965 + MER63 DNA MER1_type 684 1022 -38 1690 118 40 139 chr5 45265193 45265322 -154364828 - L1MA4A LINE L1 -6 6297 6157 2103 125 3 3 chr5 45265322 45265634 -154364516 - AluSx SINE Alu 0 312 1 1690 118 40 139 chr5 45265634 45265928 -154364222 - L1MA4A LINE L1 -146 6157 5916 * 2882 129 75 2 chr5 45265918 45266408 -154363742 - L1M2 LINE L1 -4174 3035 2510 2281 252 94 82 chr5 45266403 45267510 -154362640 - L1M2 LINE L1 -5392 1817 686 * 240 276 0 17 chr5 45267540 45267598 -154362552 + MER63 DNA MER1_type 1005 1061 0 1989 135 16 32 chr5 45268352 45268729 -154361421 + THE1C LTR MaLR 1 371 -4 2236 172 35 53 chr5 45268974 45269525 -154360625 + L1MA7 LINE L1 5747 6287 -4 877 313 72 13 chr5 45269851 45270311 -154359839 + LTR16C LTR ERVL 1 487 -4 429 329 75 17 chr5 45270497 45270737 -154359413 - MIR SINE MIR -3 259 6 1347 239 19 63 chr5 45271024 45271468 -154358682 - L1M4 LINE L1 -2157 3989 3572 1807 127 35 0 chr5 45271468 45271727 -154358423 + AluSq SINE Alu 1 268 -45 1347 239 19 63 chr5 45271727 45271822 -154358328 - L1M4 LINE L1 -2574 3572 3474 816 257 30 48 chr5 45271815 45272195 -154357955 - L1 LINE L1 -2168 3978 3613 * 236 339 31 16 chr5 45272560 45272687 -154357463 - L1ME LINE L1 -5922 148 20 241 287 100 27 chr5 45272830 45272980 -154357170 + MLT1J LTR MaLR 348 508 -3 1264 191 25 110 chr5 45273389 45273708 -154356442 + L1 LINE L1 4125 4397 -1749 1942 81 0 4 chr5 45273708 45273955 -154356195 + AluY SINE Alu 54 299 -12 1264 191 25 110 chr5 45273955 45274079 -154356071 + L1 LINE L1 4397 4530 -1616 5198 132 49 0 chr5 45274081 45275517 -154354633 + L1PA16 LINE L1 4657 6157 -9 253 313 28 50 chr5 45276435 45276614 -154353536 + MIR3 SINE MIR 33 207 -1 315 254 28 111 chr5 45276734 45277059 -154353091 + MLT1I LTR MaLR 116 549 0 206 291 47 12 chr5 45277213 45277299 -154352851 - MIR SINE MIR -109 153 65 227 283 75 25 chr5 45277445 45277565 -154352585 - LTR67 LTR ERVL -46 511 386 4832 118 108 22 chr5 45278479 45279287 -154350863 + MER4D LTR ERV1 1 877 -26 1479 295 41 23 chr5 45279417 45279932 -154350218 - L1MEc LINE L1 -5834 562 39 307 287 45 84 chr5 45280076 45280278 -154349872 + Tigger8 DNA MER2_type 462 655 -11 2341 92 0 16 chr5 45280339 45280645 -154349505 + AluY SINE Alu 1 301 -10 2137 112 10 0 chr5 45281300 45281594 -154348556 + AluSx SINE Alu 1 297 -15 2163 8 0 4 chr5 45282272 45282521 -154347629 - L1PA2 LINE L1 -263 5892 5645 1199 28 0 0 chr5 45282521 45282664 -154347486 + L1PA2 LINE L1 6013 6155 0 3175 143 30 6 chr5 45283245 45283785 -154346365 - L1PA15 LINE L1 0 6165 5613 706 306 86 17 chr5 45283853 45284144 -154346006 + L2 LINE L2 1400 1710 -1604 22 35 0 0 chr5 45284163 45284192 -154345958 + AT_rich Low_complexity Low_complexity 1 29 0 1907 121 63 30 chr5 45284876 45285239 -154344911 - THE1C LTR MaLR 0 375 1 224 30 30 0 chr5 45286473 45286506 -154343644 + (CA)n Simple_repeat Simple_repeat 2 35 0 2237 100 0 16 chr5 45286716 45287025 -154343125 + AluSp SINE Alu 6 309 -4 354 165 11 22 chr5 45288263 45288354 -154341796 + CT-rich Low_complexity Low_complexity 2 91 0 183 299 194 0 chr5 45291149 45291216 -154338934 + MER5B DNA MER1_type 56 135 -43 315 340 58 58 chr5 45292142 45292333 -154337817 + MIR3 SINE MIR 18 208 0 278 365 19 0 chr5 45292820 45292927 -154337223 + MIR3 SINE MIR 93 201 -7 184 305 122 15 chr5 45293130 45293261 -154336889 + L2 LINE L2 3165 3309 -4 1380 263 111 23 chr5 45293630 45294117 -154336033 + MLT1H1 LTR MaLR 26 555 0 263 385 101 44 chr5 45294607 45295015 -154335135 - L2 LINE L2 -4 3268 2838 463 160 9 57 chr5 45295951 45296057 -154334093 + FLAM_A SINE Alu 36 136 -6 525 296 13 7 chr5 45297734 45297886 -154332264 - MIR SINE MIR -10 252 100 273 356 23 23 chr5 45299005 45299137 -154331013 + MER5A DNA MER1_type 2 133 -56 1999 121 0 53 chr5 45299142 45299465 -154330685 - AluY SINE Alu -5 306 1 277 268 18 18 chr5 45299768 45299880 -154330270 - L1P LINE L1 -1131 5015 4904 232 287 89 10 chr5 45300172 45300273 -154329877 + L2 LINE L2 1913 2021 -1293 312 135 19 0 chr5 45300308 45300360 -154329790 - MLT1J2 LTR MaLR -48 402 350 619 276 92 0 chr5 45300429 45300614 -154329536 - MLT1J1 LTR MaLR -242 204 3 924 348 111 42 chr5 45300621 45301728 -154328422 + L2 LINE L2 2035 3210 -62 875 302 19 34 chr5 45302462 45302783 -154327367 + LTR16A LTR ERVL 109 424 -26 185 289 92 0 chr5 45304959 45305035 -154325115 + MIR SINE MIR 2 84 -178 1027 244 61 75 chr5 45305690 45306116 -154324034 - MLT1J LTR MaLR -23 488 69 2248 102 26 0 chr5 45306754 45307059 -154323091 - AluSp SINE Alu 0 313 1 1893 88 42 33 chr5 45307395 45307701 -154322449 + THE1C LTR MaLR 3 311 -64 324 0 0 0 chr5 45310077 45310113 -154320037 + (TG)n Simple_repeat Simple_repeat 2 37 0 292 378 63 0 chr5 45310793 45310920 -154319230 + L2 LINE L2 3136 3270 -2 2145 128 0 0 chr5 45313440 45313736 -154316414 - AluSx SINE Alu -16 296 1 250 323 83 23 chr5 45314474 45314607 -154315543 + L2 LINE L2 3173 3313 0 717 321 123 65 chr5 45315139 45316078 -154314072 + L2 LINE L2 2288 3272 0 4537 191 238 37 chr5 45316181 45317566 -154312584 - MER52A LTR ERV1 0 1755 1 635 168 71 0 chr5 45319584 45319697 -154310453 - FLAM_C SINE Alu -8 125 5 4476 278 99 10 chr5 45319934 45321467 -154308683 + L2 LINE L2 1307 2975 -339 652 274 125 40 chr5 45321921 45322250 -154307900 + L2 LINE L2 2953 3309 -4 377 321 19 27 chr5 45322920 45323110 -154307040 + MIR SINE MIR 23 210 -52 22 80 0 0 chr5 45323226 45323276 -154306874 + AT_rich Low_complexity Low_complexity 1 50 0 1446 235 93 88 chr5 45323549 45324205 -154305945 + LTR41 LTR ERVL 1 663 -110 3636 103 0 8 chr5 45324205 45324720 -154305430 - MER9 LTR ERVK 0 511 1 1446 235 93 88 chr5 45324720 45324817 -154305333 + LTR41 LTR ERVL 663 758 -15 23 68 0 0 chr5 45325170 45325214 -154304936 + AT_rich Low_complexity Low_complexity 1 44 0 494 204 0 0 chr5 45325440 45325528 -154304622 - Tigger7 DNA MER2_type -2 2585 2498 1437 171 32 14 chr5 45325530 45325952 -154304198 - Tigger7 DNA MER2_type -1966 521 5 1392 244 52 14 chr5 45325953 45326318 -154303832 + MLT1C LTR MaLR 86 464 -3 225 343 57 0 chr5 45326318 45326388 -154303762 - L2 LINE L2 -39 3233 3160 300 53 0 0 chr5 45326628 45326666 -154303484 + (CA)n Simple_repeat Simple_repeat 2 39 0 2048 143 39 20 chr5 45326822 45327179 -154302971 + THE1B LTR MaLR 1 364 0 238 273 8 16 chr5 45327641 45327763 -154302387 + L1MD3 LINE L1 7904 8042 0 446 253 76 89 chr5 45328191 45328416 -154301734 + MLT1K LTR MaLR 344 565 -23 1768 199 215 11 chr5 45328444 45328993 -154301157 + LTR65 LTR ERV1 1 661 -8 405 260 167 0 chr5 45329166 45329316 -154300834 + MER5A DNA MER1_type 9 183 -6 212 169 0 34 chr5 45329927 45329986 -154300164 + GA-rich Low_complexity Low_complexity 5 61 0 1693 163 0 42 chr5 45330005 45330311 -154299839 + AluJo SINE Alu 19 311 -1 261 83 0 0 chr5 45332901 45332937 -154297213 + (A)n Simple_repeat Simple_repeat 1 36 0 24 0 0 0 chr5 45333219 45333243 -154296907 + AT_rich Low_complexity Low_complexity 1 24 0 597 148 119 45 chr5 45334511 45334687 -154295463 + MER53 DNA DNA 1 189 0 198 0 0 0 chr5 45336682 45336704 -154293446 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr5 45337390 45337412 -154292738 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 45337631 45337654 -154292496 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 45337757 45337782 -154292368 + AT_rich Low_complexity Low_complexity 1 25 0 27 73 0 0 chr5 45338279 45338334 -154291816 + AT_rich Low_complexity Low_complexity 1 55 0 1069 112 0 11 chr5 45338855 45339034 -154291116 + (TTCC)n Simple_repeat Simple_repeat 2 178 0 294 328 69 23 chr5 45340428 45340559 -154289591 - L2 LINE L2 0 3272 3136 994 246 36 58 chr5 45340592 45340953 -154289197 - L2 LINE L2 -2 3311 2959 572 311 17 11 chr5 45340993 45341170 -154288980 - L2 LINE L2 -448 2866 2689 199 294 5 163 chr5 45341173 45341357 -154288793 - L2 LINE L2 -176 3096 2942 186 189 0 0 chr5 45341610 45341647 -154288503 + GA-rich Low_complexity Low_complexity 2 38 0 17029 166 50 15 chr5 45341766 45346790 -154283360 + L1MA1 LINE L1 15 4860 -2861 2528 46 0 13 chr5 45346790 45347093 -154283057 - AluY SINE Alu -12 299 1 17029 166 50 15 chr5 45347093 45348992 -154281158 + L1MA1 LINE L1 4860 7227 -494 2186 130 3 3 chr5 45348992 45349300 -154280850 + AluSc SINE Alu 1 308 -1 17029 166 50 15 chr5 45349300 45349814 -154280336 + L1MA1 LINE L1 7227 7721 0 889 361 107 12 chr5 45349826 45350518 -154279632 - L2 LINE L2 -553 2761 2004 669 186 83 0 chr5 45351724 45351869 -154278281 - MER106B DNA MER1_type -1 1058 902 2097 181 6 6 chr5 45352055 45352420 -154277730 - MLT1A1 LTR MaLR 0 365 1 239 217 0 0 chr5 45352449 45352495 -154277655 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 966 188 0 0 chr5 45354108 45354268 -154275882 - FRAM SINE Alu -16 160 1 443 255 268 0 chr5 45354388 45354541 -154275609 + MIR SINE MIR 32 225 -37 397 379 40 0 chr5 45355197 45355371 -154274779 + L2 LINE L2 2717 2897 -417 219 109 0 43 chr5 45355404 45355450 -154274700 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 561 240 104 0 chr5 45355614 45355739 -154274411 + L2 LINE L2 3134 3271 -1 49 90 0 0 chr5 45356057 45356190 -154273960 + AT_rich Low_complexity Low_complexity 1 133 0 16992 34 2 0 chr5 45356483 45359381 -154270769 + L1PA3 LINE L1 3228 6167 0 189 83 0 28 chr5 45359381 45359417 -154270733 + (TAAAA)n Simple_repeat Simple_repeat 1 45 0 243 0 0 0 chr5 45359422 45359449 -154270701 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 351 343 0 10 chr5 45360274 45360373 -154269777 - L2 LINE L2 -3 3310 3213 261 281 146 0 chr5 45361983 45362072 -154268078 - L2 LINE L2 -2 3270 3169 467 305 90 0 chr5 45362357 45362524 -154267626 + MIR SINE MIR 20 201 -61 310 250 14 0 chr5 45362536 45362608 -154267542 + MIR SINE MIR 4 76 -186 1178 272 98 24 chr5 45362833 45363251 -154266899 + LTR16A LTR ERVL 1 448 -2 591 286 119 35 chr5 45364945 45365288 -154264862 - L3 LINE CR1 -240 1337 966 23 0 0 0 chr5 45371093 45371116 -154259034 + AT_rich Low_complexity Low_complexity 1 23 0 365 289 97 9 chr5 45371140 45371254 -154258896 - L2 LINE L2 -2 3270 3147 372 328 38 0 chr5 45371552 45371683 -154258467 - MIR3 SINE MIR -23 185 50 315 0 0 0 chr5 45371982 45372017 -154258133 + (CA)n Simple_repeat Simple_repeat 2 36 0 2345 96 0 3 chr5 45372164 45372477 -154257673 - AluSx SINE Alu 0 312 1 1712 150 50 47 chr5 45372477 45372848 -154257302 - L1MC2 LINE L1 -27 6317 5943 32 0 0 0 chr5 45372864 45372896 -154257254 + AT_rich Low_complexity Low_complexity 1 32 0 534 115 0 88 chr5 45372897 45373010 -154257140 - L1MB3 LINE L1 -28 6155 6053 * 2625 156 49 30 chr5 45372993 45373519 -154256631 - L1MC2 LINE L1 -384 5960 5425 291 28 0 0 chr5 45374931 45374967 -154255183 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 22 94 0 0 chr5 45377328 45377392 -154252758 + AT_rich Low_complexity Low_complexity 1 64 0 316 263 71 20 chr5 45377624 45377723 -154252427 + L2 LINE L2 3139 3242 -30 342 287 158 24 chr5 45377831 45377995 -154252155 + MIR3 SINE MIR 16 201 -7 263 344 46 58 chr5 45378468 45378727 -154251423 + L2 LINE L2 2807 3062 -210 184 341 45 11 chr5 45378728 45378816 -154251334 + L2 LINE L2 3163 3253 -19 2338 68 0 29 chr5 45379390 45379697 -154250453 - AluY SINE Alu -13 298 1 704 250 0 38 chr5 45379830 45380014 -154250136 - L2 LINE L2 -1 3312 3136 197 329 51 101 chr5 45380109 45380267 -154249883 + L2 LINE L2 3078 3227 -45 * 490 338 76 59 chr5 45380266 45380896 -154249254 + L2 LINE L2 1987 2627 -687 313 337 29 77 chr5 45380983 45381229 -154248921 + L2 LINE L2 2616 2849 -465 1891 116 0 4 chr5 45382315 45382583 -154247567 + AluSq SINE Alu 39 305 -8 705 280 64 4 chr5 45384355 45384591 -154245559 - MIR SINE MIR 0 262 13 2489 96 8 3 chr5 45384606 45384960 -154245190 - L1PB1 LINE L1 -1 6150 5795 5110 200 22 9 chr5 45384965 45386075 -154244075 - L1 LINE L1 -1947 4199 3076 7201 101 19 17 chr5 45386077 45387650 -154242500 - L1PBa LINE L1 -4512 2351 634 976 211 5 0 chr5 45387650 45387849 -154242301 - L1PBa LINE L1 -6663 200 1 452 356 35 11 chr5 45388603 45388813 -154241337 + MIR SINE MIR 8 220 -42 296 255 47 47 chr5 45389362 45389468 -154240682 - MIR SINE MIR -56 152 47 196 260 260 10 chr5 45389531 45389627 -154240523 + L2 LINE L2 3137 3256 -16 23 0 0 0 chr5 45389662 45389685 -154240465 + AT_rich Low_complexity Low_complexity 1 23 0 248 289 31 41 chr5 45390093 45390190 -154239960 + MARNA DNA Mariner 447 542 -44 1048 168 28 0 chr5 45390390 45390569 -154239581 + MER20 DNA MER1_type 36 219 0 360 0 0 0 chr5 45392205 45392245 -154237905 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1841 56 9 0 chr5 45392245 45392478 -154237672 - L1PA5 LINE L1 -12 6142 5908 221 250 18 0 chr5 45392869 45392925 -154237225 + (CA)n Simple_repeat Simple_repeat 2 58 0 5922 97 11 10 chr5 45392938 45394300 -154235850 - L1PA10 LINE L1 0 6168 4784 4172 124 0 94 chr5 45394305 45395113 -154235037 - L1PA10 LINE L1 -1548 4598 3867 1766 160 7 0 chr5 45395780 45396068 -154234082 - AluSx SINE Alu -22 290 1 595 186 17 0 chr5 45397569 45397687 -154232463 + MER90 LTR ERV1 2 121 -454 * 1433 234 45 9 chr5 45397686 45398023 -154232127 + MER90 LTR ERV1 266 614 0 203 229 82 66 chr5 45398443 45398504 -154231646 - MIR3 SINE MIR -39 169 108 198 0 0 0 chr5 45398566 45398588 -154231562 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 459 0 0 0 chr5 45398587 45398638 -154231512 + (CA)n Simple_repeat Simple_repeat 1 51 0 2228 227 79 60 chr5 45398953 45399050 -154231100 + MER72 LTR ERV1 1 95 -627 1865 150 0 0 chr5 45399050 45399316 -154230834 + AluSx SINE Alu 1 266 -46 197 0 71 0 chr5 45399323 45399351 -154230799 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2228 227 79 60 chr5 45399351 45399951 -154230199 + MER72 LTR ERV1 100 720 -2 186 143 0 0 chr5 45399968 45400003 -154230147 + (TTC)n Simple_repeat Simple_repeat 2 36 0 302 271 27 43 chr5 45400495 45400633 -154229517 + MER5A DNA MER1_type 44 172 -6 242 314 88 0 chr5 45400702 45400804 -154229346 + MIR SINE MIR 48 158 -104 253 291 13 0 chr5 45400813 45400892 -154229258 + (CATATA)n Simple_repeat Simple_repeat 1 80 0 327 130 0 0 chr5 45401426 45401480 -154228670 + (GA)n Simple_repeat Simple_repeat 2 55 0 436 257 9 26 chr5 45401702 45401815 -154228335 + MIR SINE MIR 31 141 -67 432 294 44 40 chr5 45402117 45402344 -154227806 + MIR SINE MIR 25 247 -15 421 364 48 10 chr5 45403399 45403608 -154226542 + MIR SINE MIR 46 262 0 298 327 10 10 chr5 45404130 45404231 -154225919 - MIR3 SINE MIR 0 208 108 313 289 7 60 chr5 45404932 45405081 -154225069 + MER103 DNA DNA 16 156 -10 2044 201 56 2 chr5 45407581 45408024 -154222126 + MLT1C LTR MaLR 1 467 0 224 254 15 0 chr5 45410170 45410237 -154219913 + (TA)n Simple_repeat Simple_repeat 2 69 0 21 0 0 0 chr5 45410739 45410760 -154219390 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 45410976 45411005 -154219145 + AT_rich Low_complexity Low_complexity 1 29 0 1196 247 188 27 chr5 45411868 45412379 -154217771 + MLT1E LTR MaLR 1 593 0 777 180 212 14 chr5 45412745 45412962 -154217188 + MLT1E1 LTR MaLR 1 260 -394 1138 229 41 11 chr5 45413473 45413740 -154216410 + MLT1E1 LTR MaLR 380 654 0 234 353 188 23 chr5 45414037 45414170 -154215980 - L2 LINE L2 -6 3266 3112 194 379 21 0 chr5 45414428 45414523 -154215627 - L2 LINE L2 -78 3235 3139 295 160 0 0 chr5 45414529 45414579 -154215571 - L2 LINE L2 -1 3271 3222 925 294 141 30 chr5 45414593 45415216 -154214934 + Charlie7 DNA MER1_type 34 725 -1887 30 45 0 0 chr5 45415252 45415296 -154214854 + AT_rich Low_complexity Low_complexity 1 44 0 2737 232 28 28 chr5 45416144 45416921 -154213229 - L1ME1 LINE L1 -6 6229 5453 19401 172 25 20 chr5 45416941 45419937 -154210213 + L1MA1 LINE L1 23 3003 -4718 2212 93 6 38 chr5 45419937 45420250 -154209900 + AluY SINE Alu 1 303 -8 19401 172 25 20 chr5 45420250 45422440 -154207710 + L1MA1 LINE L1 3003 5181 -2540 1968 144 123 26 chr5 45422440 45422830 -154207320 + MSTA LTR MaLR 1 428 0 8631 158 13 40 chr5 45422832 45424452 -154205698 + MSTA-int LTR MaLR 3 1578 -2 1969 167 132 0 chr5 45424454 45424832 -154205318 + MSTA LTR MaLR 1 428 0 19401 172 25 20 chr5 45424832 45427296 -154202854 + L1MA1 LINE L1 5181 7717 -4 1440 260 135 4 chr5 45427332 45427886 -154202264 - L1ME1 LINE L1 -763 5452 4826 233 271 17 0 chr5 45427887 45427946 -154202204 + MLT1F LTR MaLR 1 60 -482 2951 255 101 13 chr5 45427958 45429459 -154200691 - L1ME1 LINE L1 -2534 3681 2086 326 195 26 0 chr5 45429614 45429691 -154200459 - L1MC4 LINE L1 -3 8039 7961 4480 10 0 0 chr5 45429706 45430217 -154199933 - L1HS LINE L1 0 6155 5645 188 389 36 14 chr5 45430456 45430595 -154199555 + MIR SINE MIR 49 190 -72 210 37 0 0 chr5 45432073 45432100 -154198050 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 311 304 135 75 chr5 45432369 45432872 -154197278 + L2 LINE L2 1968 2500 -814 198 256 0 0 chr5 45434544 45434587 -154195563 - MER5A DNA MER1_type -137 52 10 253 259 0 0 chr5 45434699 45434753 -154195397 + (CA)n Simple_repeat Simple_repeat 2 55 0 1040 335 26 28 chr5 45435615 45436078 -154194072 + L2 LINE L2 2847 3308 -5 247 264 97 28 chr5 45436236 45436308 -154193842 + L2 LINE L2 3237 3313 0 2138 93 0 26 chr5 45436445 45436755 -154193395 - AluSc SINE Alu -4 305 4 58 0 0 0 chr5 45438027 45438085 -154192065 + AT_rich Low_complexity Low_complexity 1 58 0 245 289 24 0 chr5 45438154 45438237 -154191913 - L1MC4 LINE L1 -1341 6701 6617 182 351 0 39 chr5 45439607 45439684 -154190466 - L2 LINE L2 -12 3260 3187 295 315 65 25 chr5 45440091 45440291 -154189859 + L1MEd LINE L1 94 301 -5818 747 47 0 19 chr5 45440443 45440549 -154189601 - AluSp SINE Alu 0 313 210 703 117 10 0 chr5 45440539 45440642 -154189508 - AluSp SINE Alu -126 187 84 * 3104 176 30 2 chr5 45440833 45441368 -154188782 + MER44D DNA MER2_type 1 605 0 228 284 68 27 chr5 45441407 45441481 -154188669 - MIR SINE MIR -114 94 18 268 297 109 0 chr5 45441936 45442037 -154188113 - MIR3 SINE MIR -15 193 82 639 308 113 10 chr5 45442037 45442504 -154187646 - LTR33 LTR ERVL 0 521 1 21 57 0 0 chr5 45444392 45444427 -154185723 + AT_rich Low_complexity Low_complexity 1 35 0 706 243 115 43 chr5 45445884 45446119 -154184031 + MIR SINE MIR 10 261 -1 27 0 0 0 chr5 45446243 45446270 -154183880 + AT_rich Low_complexity Low_complexity 1 27 0 2403 71 0 0 chr5 45447646 45447956 -154182194 + AluY SINE Alu 1 310 -1 232 259 82 67 chr5 45448530 45448665 -154181485 + MIR SINE MIR 8 144 -118 358 306 45 33 chr5 45448670 45449421 -154180729 - L1MEd LINE L1 -1430 4699 3750 379 310 106 29 chr5 45449427 45449672 -154180478 - L1MEd LINE L1 -2549 3580 3317 720 32 0 0 chr5 45449887 45449980 -154180170 + AluS SINE Alu 1 93 -219 1684 136 54 30 chr5 45450029 45450361 -154179789 - L1MA9 LINE L1 0 6312 5973 595 298 104 47 chr5 45450379 45450485 -154179665 - L1MEd LINE L1 -3040 3089 2990 2327 69 14 0 chr5 45450485 45450774 -154179376 + AluSp SINE Alu 1 293 -20 595 298 104 47 chr5 45450774 45451497 -154178653 - L1MEd LINE L1 -3139 2990 2213 6097 139 40 3 chr5 45451540 45452530 -154177620 - L1MC1 LINE L1 -6 6327 5301 21 36 0 0 chr5 45452535 45452563 -154177587 + AT_rich Low_complexity Low_complexity 1 28 0 634 275 115 26 chr5 45452975 45453617 -154176533 - L1MEd LINE L1 -4500 1629 943 2700 153 23 40 chr5 45453961 45454517 -154175633 + L1MA7 LINE L1 5743 6289 -2 381 22 0 0 chr5 45455544 45455590 -154174560 + (A)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr5 45455851 45455873 -154174277 + AT_rich Low_complexity Low_complexity 1 22 0 585 362 107 43 chr5 45456252 45456815 -154173335 - L1MEd LINE L1 -5461 658 60 1760 112 89 104 chr5 45456815 45457209 -154172941 + MLT1B LTR MaLR 1 388 -2 231 269 0 0 chr5 45457916 45457968 -154172182 + GA-rich Low_complexity Low_complexity 3 54 0 225 275 14 0 chr5 45458223 45458292 -154171858 + GA-rich Low_complexity Low_complexity 1 70 0 225 275 14 0 chr5 45458711 45458780 -154171370 + GA-rich Low_complexity Low_complexity 1 70 0 24 32 0 0 chr5 45458921 45458952 -154171198 + AT_rich Low_complexity Low_complexity 1 31 0 819 261 20 0 chr5 45459081 45459280 -154170870 + MIR SINE MIR 49 251 -11 456 293 102 0 chr5 45462193 45462398 -154167752 + MIR SINE MIR 33 258 -4 198 129 0 0 chr5 45463269 45463300 -154166850 + MIR SINE MIR 84 114 -94 * 337 258 108 0 chr5 45463298 45463391 -154166759 - L2 LINE L2 -2 3311 3209 244 375 0 10 chr5 45463489 45463585 -154166565 - MER91A DNA MER1_type -82 114 20 333 317 60 57 chr5 45464032 45464385 -154165765 - L1ME4a LINE L1 -73 6048 5695 280 224 55 121 chr5 45464499 45464664 -154165486 + MIR SINE MIR 1 154 -54 434 279 49 0 chr5 45465328 45465450 -154164700 + MIR SINE MIR 7 134 -128 472 331 54 54 chr5 45466490 45466905 -154163245 - L2 LINE L2 -257 3056 2629 407 241 128 14 chr5 45466918 45467059 -154163091 + MLT1J2 LTR MaLR 1 157 -293 2529 143 2 12 chr5 45467335 45467735 -154162415 + MER61B LTR ERV1 1 396 -29 946 243 106 84 chr5 45468289 45468787 -154161363 + MLT1J LTR MaLR 1 509 -2 651 266 14 138 chr5 45469121 45469250 -154160900 + MIR SINE MIR 8 83 -179 2442 90 0 0 chr5 45469250 45469561 -154160589 - AluSx SINE Alu 0 312 2 651 266 14 138 chr5 45469561 45469721 -154160429 + MIR SINE MIR 83 261 -1 310 255 19 38 chr5 45471488 45471594 -154158556 + MIR SINE MIR 107 210 -52 314 168 64 24 chr5 45472049 45472164 -154157986 + (TA)n Simple_repeat Simple_repeat 2 124 -7 1799 156 51 12 chr5 45472164 45472498 -154157652 + MER7A DNA MER2_type 2 346 0 314 168 64 24 chr5 45472498 45472507 -154157643 + (TA)n Simple_repeat Simple_repeat 124 131 0 478 222 0 17 chr5 45474737 45474854 -154155296 - L1 LINE L1 -990 5156 5042 2359 57 37 3 chr5 45474932 45475231 -154154919 + AluY SINE Alu 1 309 -2 221 290 138 28 chr5 45475579 45475724 -154154426 - MIR SINE MIR -56 206 46 983 286 37 0 chr5 45478513 45478797 -154151353 - LTR16C LTR ERVL -3 473 194 1979 134 19 8 chr5 45481900 45482266 -154147884 - L1MA8 LINE L1 0 6291 5922 410 289 66 57 chr5 45482510 45482721 -154147429 + MIR SINE MIR 37 249 -13 1628 226 45 54 chr5 45483129 45483278 -154146872 + MLT1C LTR MaLR 6 155 -312 1901 193 11 3 chr5 45483278 45483636 -154146514 - MLT1A1 LTR MaLR 0 365 5 1628 226 45 54 chr5 45483636 45483827 -154146323 + MLT1C LTR MaLR 155 343 -124 2132 137 13 24 chr5 45483827 45484206 -154145944 - THE1C LTR MaLR 0 375 1 1628 226 45 54 chr5 45484206 45484328 -154145822 + MLT1C LTR MaLR 343 465 -2 305 349 38 0 chr5 45485117 45485249 -154144901 - L2 LINE L2 -208 3105 2969 1993 171 0 46 chr5 45485598 45485966 -154144184 + MLT1A1 LTR MaLR 14 364 -1 376 268 12 0 chr5 45487546 45487628 -154142522 - L2 LINE L2 -5 3308 3226 191 313 0 0 chr5 45488886 45488934 -154141216 - L2 LINE L2 -11 3261 3214 417 306 192 24 chr5 45491383 45491680 -154138470 - L2 LINE L2 -978 2336 1990 1073 118 7 0 chr5 45491686 45491839 -154138311 + AluSp/q SINE Alu 158 311 -2 296 286 107 51 chr5 45491848 45492026 -154138124 - L2 LINE L2 -1334 1980 1793 1761 192 28 11 chr5 45492202 45492561 -154137589 - MLT1A1 LTR MaLR 0 365 1 1069 50 0 21 chr5 45493482 45493622 -154136528 + L1PA7 LINE L1 6018 6154 0 580 265 136 15 chr5 45493702 45494026 -154136124 - L1MEd LINE L1 -4886 1233 871 297 0 0 0 chr5 45494378 45494411 -154135739 + (T)n Simple_repeat Simple_repeat 1 33 0 9471 182 20 18 chr5 45495439 45497036 -154133114 - L1MA7 LINE L1 -2 6289 4680 2130 136 13 0 chr5 45497036 45497344 -154132806 - AluSq SINE Alu -1 312 1 9471 182 20 18 chr5 45497344 45498696 -154131454 - L1MA7 LINE L1 -1611 4680 3333 510 343 102 69 chr5 45499143 45499811 -154130339 + HAL1 LINE L1 12 701 -1806 519 252 60 15 chr5 45499937 45500136 -154130014 - MER31B LTR ERV1 0 543 259 2232 190 53 24 chr5 45500136 45500605 -154129545 + L1M1 LINE L1 24 506 -7059 1314 123 9 4 chr5 45500581 45500809 -154129341 + L1M1 LINE L1 2967 3195 -4370 * 514 187 24 0 chr5 45500809 45500932 -154129218 + CT-rich Low_complexity Low_complexity 1 126 0 22 0 0 0 chr5 45501910 45501932 -154128218 + AT_rich Low_complexity Low_complexity 1 22 0 253 158 35 0 chr5 45502328 45502370 -154127780 - HSMAR1 DNA Mariner 0 1287 1241 189 0 0 0 chr5 45502370 45502391 -154127759 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 253 158 35 0 chr5 45502391 45502405 -154127745 - HSMAR1 DNA Mariner -46 1241 1229 1736 83 91 51 chr5 45502405 45502681 -154127469 - AluY SINE Alu -24 287 1 388 138 0 31 chr5 45502910 45502975 -154127175 - LTR3b LTR ERVK 0 500 438 1835 175 47 44 chr5 45502975 45503403 -154126747 - LTR3 LTR ERVK 0 429 1 285 163 0 0 chr5 45503418 45503467 -154126683 - HERVK14 LTR ERVK -61 5884 5836 * 2140 193 17 10 chr5 45503458 45503868 -154126282 - HERVK3 LTR ERVK -4967 2276 1864 303 111 0 111 chr5 45503868 45503931 -154126219 - HERVK3 LTR ERVK -5867 1376 1321 * 402 260 0 29 chr5 45503919 45504023 -154126127 - HERVK3 LTR ERVK -6563 680 580 769 199 92 15 chr5 45504089 45504285 -154125865 - HERVK3 LTR ERVK -6978 265 55 431 151 123 0 chr5 45504594 45504667 -154125483 - LTR3b LTR ERVK 0 500 419 2059 122 14 3 chr5 45504676 45504972 -154125178 - LTR3b LTR ERVK -17 483 185 400 169 0 0 chr5 45505020 45505085 -154125065 - Tigger5 DNA MER2_type -2244 79 15 372 202 30 71 chr5 45505117 45505151 -154124999 - MIR SINE MIR -65 197 163 2817 209 16 5 chr5 45505151 45505707 -154124443 + MER68 LTR ERV1 1 562 0 372 202 30 71 chr5 45505707 45505771 -154124379 - MIR SINE MIR -99 163 103 289 263 0 25 chr5 45506055 45506135 -154124015 + MIR SINE MIR 74 151 -111 243 382 18 0 chr5 45506301 45506411 -154123739 + MIR SINE MIR 28 139 -123 21 0 0 0 chr5 45506599 45506620 -154123530 + AT_rich Low_complexity Low_complexity 1 21 0 1880 154 133 16 chr5 45507626 45508009 -154122141 - MSTA LTR MaLR 0 428 1 2328 172 7 7 chr5 45508009 45508452 -154121698 + L1MB3 LINE L1 5741 6183 0 345 47 0 0 chr5 45508636 45508679 -154121471 + (GA)n Simple_repeat Simple_repeat 1 43 0 2038 99 40 0 chr5 45509568 45509867 -154120283 + AluSx SINE Alu 1 310 0 261 139 0 0 chr5 45510032 45510075 -154120075 + (A)n Simple_repeat Simple_repeat 1 43 0 292 219 110 0 chr5 45510140 45510222 -154119928 + MIR SINE MIR 115 205 -57 184 307 158 39 chr5 45511095 45511222 -154118928 + L2 LINE L2 3172 3313 0 1549 154 48 6 chr5 45511697 45512009 -154118141 - L1MB2 LINE L1 0 6171 5847 308 344 23 23 chr5 45512255 45512386 -154117764 + MIR3 SINE MIR 11 141 -67 32 26 0 0 chr5 45512457 45512496 -154117654 + AT_rich Low_complexity Low_complexity 1 39 0 1010 125 6 6 chr5 45512502 45512670 -154117480 + L1MB3 LINE L1 6015 6182 -1 220 282 94 34 chr5 45512880 45512997 -154117153 - MIR SINE MIR -46 216 93 246 62 0 0 chr5 45513170 45513202 -154116948 + (CA)n Simple_repeat Simple_repeat 2 33 0 24 32 0 0 chr5 45513846 45513877 -154116273 + AT_rich Low_complexity Low_complexity 1 31 0 535 290 34 23 chr5 45513988 45514164 -154115986 - MIR SINE MIR -4 258 81 215 346 138 31 chr5 45514159 45514289 -154115861 - L3 LINE CR1 -8 1569 1426 * 581 366 28 16 chr5 45514491 45514813 -154115337 - L3 LINE CR1 -412 1165 840 386 305 105 21 chr5 45515660 45515850 -154114300 - MIR SINE MIR -11 251 46 549 298 174 26 chr5 45516371 45516797 -154113353 - L2 LINE L2 -11 3302 2814 27 0 0 0 chr5 45516824 45516851 -154113299 + AT_rich Low_complexity Low_complexity 1 27 0 44184 36 1 4 chr5 45516851 45523020 -154107130 - L1PA3 LINE L1 -3 6152 2 904 164 20 0 chr5 45523023 45523175 -154106975 - FRAM SINE Alu -5 171 17 1346 337 45 30 chr5 45523175 45523881 -154106269 - L2 LINE L2 -570 2744 2028 2641 265 95 67 chr5 45523884 45526176 -154103974 + L1MB1 LINE L1 1 1979 -3993 11745 202 41 19 chr5 45526208 45528910 -154101240 + L1MB1 LINE L1 2045 4857 -1135 2931 173 38 12 chr5 45528910 45529493 -154100657 + L1PB4 LINE L1 5547 6144 -12 11745 202 41 19 chr5 45529493 45530655 -154099495 + L1MB1 LINE L1 4857 5992 0 1285 301 94 16 chr5 45530661 45531289 -154098861 - L2 LINE L2 -1284 2030 1354 197 108 27 0 chr5 45531309 45531346 -154098804 + (TG)n Simple_repeat Simple_repeat 1 38 0 976 344 33 9 chr5 45531426 45531847 -154098303 - L2 LINE L2 -1913 1401 971 318 87 0 0 chr5 45532903 45532949 -154097201 + (TG)n Simple_repeat Simple_repeat 1 46 0 249 83 0 0 chr5 45534146 45534182 -154095968 + (TG)n Simple_repeat Simple_repeat 1 36 0 412 269 119 25 chr5 45534947 45535107 -154095043 - MER5A DNA MER1_type -6 183 9 349 278 8 53 chr5 45537399 45537532 -154092618 + MIR SINE MIR 95 221 -41 205 175 0 0 chr5 45538092 45538132 -154092018 + T-rich Low_complexity Low_complexity 2 41 0 274 272 81 36 chr5 45541214 45541373 -154088777 + MIR SINE MIR 35 203 -59 286 338 26 52 chr5 45541823 45541902 -154088248 + MIR3 SINE MIR 54 129 -79 2706 171 2 11 chr5 45541902 45542370 -154087780 - MLT2C2 LTR ERVL 0 464 1 286 338 26 52 chr5 45542370 45542444 -154087706 + MIR3 SINE MIR 129 203 -5 2110 70 0 4 chr5 45542525 45542784 -154087366 - AluY SINE Alu -53 258 1 24 32 0 0 chr5 45543384 45543415 -154086735 + AT_rich Low_complexity Low_complexity 1 31 0 208 279 82 74 chr5 45544015 45544137 -154086013 + L2 LINE L2 3166 3288 -25 220 221 211 29 chr5 45544154 45544258 -154085892 - L2 LINE L2 0 3313 3191 2838 158 14 0 chr5 45544709 45545201 -154084949 + L1MB3 LINE L1 5685 6183 0 2162 229 43 25 chr5 45545293 45545848 -154084302 - MER90 LTR ERV1 -10 565 1 22 80 0 0 chr5 45546902 45546952 -154083198 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 45546965 45546986 -154083164 + AT_rich Low_complexity Low_complexity 1 21 0 508 236 88 28 chr5 45547217 45547399 -154082751 - L1MC5 LINE L1 -48 7913 7721 901 87 0 0 chr5 45547626 45547741 -154082409 - AluSq/x SINE Alu -198 115 1 1948 141 14 0 chr5 45549022 45549312 -154080838 + AluSx SINE Alu 3 296 -16 35 54 0 0 chr5 45550475 45550531 -154079619 + AT_rich Low_complexity Low_complexity 1 56 0 315 0 0 0 chr5 45552369 45552404 -154077746 + (TG)n Simple_repeat Simple_repeat 1 35 0 360 239 188 24 chr5 45552848 45553061 -154077089 - LTR50 LTR ERVL -20 775 528 816 240 149 8 chr5 45553182 45553424 -154076726 - LTR50 LTR ERVL -517 278 3 2019 187 38 115 chr5 45553426 45553956 -154076194 + MLT1D LTR MaLR 1 489 -16 728 196 13 0 chr5 45554053 45554211 -154075939 + L1ME2 LINE L1 5336 5495 -669 1976 105 7 4 chr5 45554211 45554487 -154075663 - AluSq SINE Alu -8 305 29 3521 143 36 25 chr5 45554587 45555228 -154074922 - MER4E LTR ERV1 -118 648 1 518 250 29 15 chr5 45555228 45555364 -154074786 + MLT1C LTR MaLR 287 424 -43 338 222 0 50 chr5 45555366 45555465 -154074685 + L1ME2 LINE L1 5837 5930 -234 525 317 108 8 chr5 45555466 45555711 -154074439 + MLT1H LTR MaLR 11 282 -267 4116 125 6 11 chr5 45555711 45556135 -154074015 + MER41B LTR ERV1 1 423 -212 2184 135 30 25 chr5 45556135 45556497 -154073653 + THE1B LTR MaLR 1 364 0 4116 125 6 11 chr5 45556497 45556702 -154073448 + MER41B LTR ERV1 423 627 -8 549 288 62 10 chr5 45556710 45556935 -154073215 + MLT1H LTR MaLR 278 546 -3 1863 165 36 43 chr5 45556974 45557367 -154072783 + L1MA8 LINE L1 4658 5047 -1099 2195 122 99 18 chr5 45557368 45557761 -154072389 + MER4B LTR ERV1 1 425 -185 273 111 22 0 chr5 45557761 45557806 -154072344 + MADE1 DNA Mariner 1 46 -34 263 95 0 0 chr5 45557893 45557935 -154072215 + MADE1 DNA Mariner 35 76 -4 1272 113 11 0 chr5 45557939 45558124 -154072026 + MER4B LTR ERV1 424 610 0 4754 147 13 12 chr5 45558124 45559139 -154071011 + L1MA8 LINE L1 5045 6062 -229 543 232 48 77 chr5 45559140 45559347 -154070803 + L1ME2 LINE L1 5961 6161 -3 702 192 187 5 chr5 45559383 45559581 -154070569 + MER31B LTR ERV1 225 458 -8 21 0 0 0 chr5 45561429 45561450 -154068700 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 45561487 45561513 -154068637 + AT_rich Low_complexity Low_complexity 1 26 0 19223 38 2 5 chr5 45562286 45565448 -154064702 - L1PA4 LINE L1 0 6155 2999 1427 166 78 51 chr5 45565616 45565830 -154064320 - MLT1A1 LTR MaLR 0 365 137 2312 115 0 0 chr5 45565830 45566134 -154064016 - AluY SINE Alu -7 304 1 1427 166 78 51 chr5 45566134 45566251 -154063899 - MLT1A1 LTR MaLR -228 137 25 191 204 0 41 chr5 45566257 45566306 -154063844 + MIR SINE MIR 94 140 -68 235 233 49 14 chr5 45567077 45567196 -154062954 + MIR SINE MIR 47 208 -54 625 185 25 49 chr5 45568379 45568541 -154061609 - L1PB4 LINE L1 -1 6155 5998 4979 223 30 131 chr5 45568691 45570882 -154059268 - L1PA15-16 LINE L1 -4469 2380 415 4441 154 22 19 chr5 45570892 45571721 -154058429 + L1PA16 LINE L1 5336 6166 0 272 183 28 28 chr5 45571730 45571801 -154058349 - L1PA15-16 LINE L1 -6503 346 276 2639 219 28 56 chr5 45571805 45572660 -154057490 - L1 LINE L1 -1490 4656 3826 237 315 212 0 chr5 45572660 45572825 -154057325 + MIR SINE MIR 61 260 -2 306 191 56 56 chr5 45573688 45573777 -154056373 - L2 LINE L2 -65 3248 3160 242 299 81 0 chr5 45573815 45573902 -154056248 - L2 LINE L2 -277 3036 2943 2350 88 0 31 chr5 45574867 45575187 -154054963 + AluY SINE Alu 1 310 -1 187 313 62 0 chr5 45575382 45575462 -154054688 - MIR SINE MIR -27 235 151 1810 277 89 58 chr5 45576285 45576387 -154053763 - L2 LINE L2 -98 3215 3118 1221 227 102 21 chr5 45576387 45576819 -154053331 - MLT1C LTR MaLR 0 467 1 1810 277 89 58 chr5 45576819 45577352 -154052798 - L2 LINE L2 -195 3118 2540 1595 190 10 20 chr5 45577352 45577652 -154052498 - AluJb SINE Alu -10 302 6 1810 277 89 58 chr5 45577652 45577928 -154052222 - L2 LINE L2 -773 2540 2274 3144 47 0 0 chr5 45578056 45578441 -154051709 + L1PA4 LINE L1 5764 6148 -7 25 0 0 0 chr5 45578441 45578466 -154051684 + AT_rich Low_complexity Low_complexity 1 25 0 4121 170 9 9 chr5 45578466 45579716 -154050434 + L1PA13 LINE L1 4507 5754 -411 5512 163 44 7 chr5 45579740 45579814 -154050336 + L1PA13 LINE L1 4148 4218 -1945 2000 143 3 0 chr5 45579814 45580100 -154050050 - AluSx SINE Alu -23 289 3 5512 163 44 7 chr5 45580100 45581330 -154048820 + L1PA13 LINE L1 4218 5543 -620 250 78 20 20 chr5 45581330 45581381 -154048769 + (TA)n Simple_repeat Simple_repeat 2 52 0 5512 163 44 7 chr5 45581381 45582001 -154048149 + L1PA13 LINE L1 5543 6138 -25 1006 148 92 0 chr5 45582001 45582197 -154047953 + L1PA13 LINE L1 5948 6161 -2 35 0 0 0 chr5 45582303 45582338 -154047812 + AT_rich Low_complexity Low_complexity 1 35 0 2169 181 46 2 chr5 45582515 45582925 -154047225 + MSTA LTR MaLR 1 428 0 221 304 185 0 chr5 45583769 45583861 -154046289 - MIR SINE MIR -64 144 36 379 292 44 0 chr5 45584077 45584190 -154045960 + MIR SINE MIR 37 154 -108 4069 171 56 29 chr5 45584220 45584399 -154045751 - L1MA7 LINE L1 -2 6289 6116 2345 53 0 27 chr5 45584399 45584699 -154045451 - AluY SINE Alu -19 292 1 4069 171 56 29 chr5 45584699 45585924 -154044226 - L1MA7 LINE L1 -175 6116 4848 2207 161 60 60 chr5 45585930 45586546 -154043604 + L1MA7 LINE L1 4219 4834 -1312 402 38 0 0 chr5 45586812 45586865 -154043285 - MADE1 DNA Mariner -27 53 1 199 277 31 31 chr5 45589197 45589262 -154040888 + MIR SINE MIR 77 141 -67 395 227 116 12 chr5 45589271 45589443 -154040707 + L1MB3 LINE L1 5987 6176 -7 314 271 75 0 chr5 45589461 45589568 -154040582 + MIR SINE MIR 148 262 0 304 274 43 43 chr5 45590193 45590310 -154039840 - MIR3 SINE MIR -6 202 86 * 1527 340 88 17 chr5 45590309 45591501 -154038649 + L2 LINE L2 882 2158 -1156 4059 32 4 12 chr5 45591507 45592002 -154038148 + L1PA4 LINE L1 5662 6152 -3 200 349 47 9 chr5 45592034 45592140 -154038010 + L2 LINE L2 2403 2512 -802 200 222 130 19 chr5 45592140 45592194 -154037956 - L2 LINE L2 0 3313 3254 2040 126 7 29 chr5 45592454 45592764 -154037386 - AluSc SINE Alu -6 303 1 222 264 19 19 chr5 45592793 45592899 -154037251 + T-rich Low_complexity Low_complexity 2 107 0 41274 47 2 1 chr5 45592902 45599049 -154031101 - L1PA3 LINE L1 -3 6152 1 1130 141 40 80 chr5 45599105 45599381 -154030769 - MLT2C2 LTR ERVL -199 265 1 1815 173 0 0 chr5 45601594 45601872 -154028278 + AluSx SINE Alu 1 278 -34 368 123 0 15 chr5 45601877 45601942 -154028208 + (GGAA)n Simple_repeat Simple_repeat 1 64 0 189 0 0 0 chr5 45602277 45602298 -154027852 + (AGATG)n Simple_repeat Simple_repeat 3 23 0 1342 241 60 42 chr5 45603378 45603830 -154026320 - MLT1C LTR MaLR -3 464 5 1306 220 0 20 chr5 45605418 45605718 -154024432 - MLT1A1 LTR MaLR 0 365 72 212 366 61 0 chr5 45605841 45605923 -154024227 - L2 LINE L2 -28 3285 3199 499 298 89 21 chr5 45608187 45608395 -154021755 + MIR SINE MIR 6 233 -29 308 311 31 52 chr5 45608395 45608588 -154021562 - MER5A DNA MER1_type 0 189 1 499 298 89 21 chr5 45608588 45608614 -154021536 + MIR SINE MIR 233 256 -6 245 305 0 0 chr5 45608836 45608895 -154021255 - L2 LINE L2 0 3313 3255 735 243 46 46 chr5 45608901 45609057 -154021093 + MER58A DNA MER1_type 6 164 -2256 1819 178 25 8 chr5 45609057 45609412 -154020738 - MLT1A1 LTR MaLR 0 365 5 735 243 46 46 chr5 45609412 45609473 -154020677 + MER58A DNA MER1_type 163 223 -1 226 195 0 65 chr5 45609736 45609813 -154020337 - LTR67 LTR ERVL -28 529 458 379 231 59 163 chr5 45610610 45610741 -154019409 - MIR SINE MIR -25 237 94 2374 106 0 0 chr5 45610741 45611043 -154019107 + AluSx SINE Alu 1 302 -10 379 231 59 163 chr5 45611043 45611060 -154019090 - MIR SINE MIR -168 94 77 2097 134 3 13 chr5 45611060 45611373 -154018777 + AluSq SINE Alu 1 310 -3 379 231 59 163 chr5 45611373 45611444 -154018706 - MIR SINE MIR -185 77 40 974 178 15 5 chr5 45611999 45612201 -154017949 - MER3 DNA MER1_type -5 204 1 255 336 25 34 chr5 45612216 45612335 -154017815 + MER5A DNA MER1_type 47 164 -25 255 326 143 0 chr5 45612774 45612872 -154017278 + L2 LINE L2 3187 3298 -15 662 294 49 46 chr5 45613692 45614042 -154016108 - LTR16A1 LTR ERVL 0 457 107 609 297 51 49 chr5 45614350 45614700 -154015450 - LTR16A1 LTR ERVL 0 457 107 1641 136 145 21 chr5 45615822 45616154 -154013996 - THE1C LTR MaLR 0 375 3 554 223 67 57 chr5 45617030 45617223 -154012927 + MER106A DNA MER1_type 37 231 -5 563 187 0 0 chr5 45617513 45617620 -154012530 + FRAM SINE Alu 70 176 0 590 261 208 13 chr5 45617848 45618265 -154011885 + LTR50 LTR ERVL 3 598 -197 274 161 36 0 chr5 45618323 45618379 -154011771 + LTR50 LTR ERVL 728 785 -10 1396 223 66 18 chr5 45618603 45619042 -154011108 + MLT1C LTR MaLR 8 467 0 459 304 61 17 chr5 45620233 45620414 -154009736 + MIR SINE MIR 49 237 -25 1143 274 25 38 chr5 45621382 45621780 -154008370 - L2 LINE L2 -831 2483 2091 469 378 101 16 chr5 45621809 45622322 -154007828 - L3 LINE CR1 -353 1224 668 1979 125 9 34 chr5 45622352 45622672 -154007478 - AluSx SINE Alu 0 312 1 34 24 0 0 chr5 45622809 45622850 -154007300 + AT_rich Low_complexity Low_complexity 1 41 0 22 35 0 0 chr5 45623102 45623131 -154007019 + AT_rich Low_complexity Low_complexity 1 29 0 3447 29 0 2 chr5 45623588 45623998 -154006152 - L1PA4 LINE L1 -3 6152 5744 428 384 47 41 chr5 45624266 45624709 -154005441 + L1MEd LINE L1 356 801 -5404 496 266 79 26 chr5 45624842 45625184 -154004966 + L1MEd LINE L1 981 1340 -4865 1985 172 9 20 chr5 45625349 45625827 -154004323 + L1P3 LINE L1 6 786 -5675 474 18 0 0 chr5 45626061 45626116 -154004034 + (TG)n Simple_repeat Simple_repeat 2 56 0 2243 215 65 19 chr5 45626116 45626153 -154003997 - MLT2B3 LTR ERVL -3 551 517 474 14 57 0 chr5 45626153 45626223 -154003927 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 2243 215 65 19 chr5 45626223 45626503 -154003647 - MLT2B3 LTR ERVL -37 517 197 1801 165 7 0 chr5 45626503 45626837 -154003313 - AluSx SINE Alu 0 336 1 2243 215 65 19 chr5 45626837 45627043 -154003107 - MLT2B3 LTR ERVL -357 197 2 354 100 62 0 chr5 45627043 45627123 -154003027 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 1086 196 20 125 chr5 45627141 45627549 -154002601 - MLT2D LTR ERVL -48 366 2 453 287 31 36 chr5 45628002 45628197 -154001953 + L1MEd LINE L1 2103 2296 -4100 375 229 99 63 chr5 45628280 45628503 -154001647 + HAL1 LINE L1 2258 2488 -19 719 233 93 5 chr5 45629235 45629428 -154000722 - MER63A DNA MER1_type 0 210 1 490 272 60 32 chr5 45629543 45630077 -154000073 + L1MCc LINE L1 1126 1847 -4891 1455 224 47 0 chr5 45630136 45630458 -153999692 + MER2 DNA MER2_type 9 345 0 212 173 39 0 chr5 45630459 45630511 -153999639 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2520 53 20 0 chr5 45630557 45630859 -153999291 + AluY SINE Alu 1 308 -3 222 118 0 0 chr5 45630862 45630896 -153999254 + (TA)n Simple_repeat Simple_repeat 1 34 0 599 255 121 11 chr5 45631186 45631558 -153998592 + L1MCc LINE L1 2564 2976 -4146 2849 13 0 0 chr5 45632271 45632582 -153997568 + AluYb8 SINE Alu 1 311 -7 29122 53 2 2 chr5 45633098 45637756 -153992394 - L1PA5 LINE L1 0 6154 1495 4014 228 76 29 chr5 45648193 45649631 -153980519 + L1MCc LINE L1 3453 4958 -1983 660 349 63 42 chr5 45650243 45650621 -153979529 + L2 LINE L2 2887 3272 0 240 226 24 60 chr5 45650663 45650747 -153979403 - MIR3 SINE MIR -3 205 125 2669 110 22 3 chr5 45650854 45651238 -153978912 + MLT2A1 LTR ERVL 1 523 -31 468 0 0 0 chr5 45651238 45651290 -153978860 + (TA)n Simple_repeat Simple_repeat 2 53 0 2669 110 22 3 chr5 45651290 45651323 -153978827 + MLT2A1 LTR ERVL 523 554 0 2538 138 8 25 chr5 45651329 45651857 -153978293 + HERVL-A1 LTR ERVL 20 538 -5116 202 383 48 36 chr5 45652019 45652267 -153977883 + L2 LINE L2 1345 1595 -1719 1765 324 72 44 chr5 45652299 45653603 -153976547 + L2 LINE L2 1688 3021 -251 1240 146 67 4 chr5 45653793 45654033 -153976117 - MER2 DNA MER2_type 0 345 91 767 277 83 70 chr5 45654238 45654852 -153975298 - L2 LINE L2 0 3313 2717 282 331 184 31 chr5 45654863 45655244 -153974906 - L2 LINE L2 -2118 1196 758 22 56 0 0 chr5 45655269 45655305 -153974845 + AT_rich Low_complexity Low_complexity 1 36 0 183 364 33 66 chr5 45655642 45655793 -153974357 + MER5A DNA MER1_type 44 189 0 536 340 81 28 chr5 45655806 45656338 -153973812 + MLT1K LTR MaLR 3 562 -26 483 260 82 29 chr5 45658814 45659156 -153970994 + L1MEd LINE L1 981 1340 -4865 1978 169 9 23 chr5 45659321 45659800 -153970350 + L1P3 LINE L1 6 786 -5675 1481 218 41 67 chr5 45659996 45660034 -153970116 - MLT2B3 LTR ERVL 0 551 514 369 0 0 0 chr5 45660034 45660075 -153970075 + (TG)n Simple_repeat Simple_repeat 2 42 0 1481 218 41 67 chr5 45660075 45660112 -153970038 - MLT2B3 LTR ERVL -37 514 478 474 14 57 0 chr5 45660112 45660182 -153969968 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 1481 218 41 67 chr5 45660182 45660462 -153969688 - MLT2B3 LTR ERVL -73 478 237 1756 166 11 0 chr5 45660462 45660795 -153969355 - AluSx SINE Alu 0 336 1 1481 218 41 67 chr5 45660795 45660968 -153969182 - MLT2B3 LTR ERVL -314 237 61 327 104 65 0 chr5 45661051 45661128 -153969022 + (TCTA)n Simple_repeat Simple_repeat 2 83 0 1086 196 20 125 chr5 45661146 45661554 -153968596 - MLT2D LTR ERVL -48 366 2 453 287 31 36 chr5 45662006 45662201 -153967949 + L1MEd LINE L1 2103 2296 -4100 308 221 11 11 chr5 45662284 45662379 -153967771 + HAL1 LINE L1 2258 2352 -155 5695 7 0 6 chr5 45662390 45663064 -153967086 + L1HS LINE L1 5486 6155 0 724 233 93 5 chr5 45663917 45664110 -153966040 - MER63A DNA MER1_type 0 210 1 508 271 60 32 chr5 45664225 45664759 -153965391 + L1MCc LINE L1 1126 1847 -4891 1465 224 47 0 chr5 45664818 45665140 -153965010 + MER2 DNA MER2_type 9 345 0 212 173 39 0 chr5 45665141 45665193 -153964957 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2505 53 20 0 chr5 45665239 45665538 -153964612 + AluY SINE Alu 1 305 -6 201 147 0 0 chr5 45665541 45665575 -153964575 + (TA)n Simple_repeat Simple_repeat 1 34 0 424 281 22 43 chr5 45666035 45666174 -153963976 + MER5B DNA MER1_type 43 178 0 746 230 16 95 chr5 45666558 45666810 -153963340 + MIR SINE MIR 31 262 0 433 308 146 39 chr5 45666870 45667234 -153962916 + L1MCc LINE L1 3671 4073 -2868 446 209 22 0 chr5 45668352 45668443 -153961707 + MER63 DNA MER1_type 33 751 -85 243 152 22 0 chr5 45668447 45668493 -153961657 + MER63 DNA MER1_type 978 1024 -36 359 336 34 17 chr5 45668696 45668815 -153961335 - L2 LINE L2 -2 3270 3150 181 310 0 17 chr5 45669121 45669179 -153960971 - MIR SINE MIR -50 212 156 424 262 63 16 chr5 45670350 45670476 -153959674 + L2 LINE L2 3182 3313 0 23 0 0 0 chr5 45672539 45672562 -153957588 + AT_rich Low_complexity Low_complexity 1 23 0 3489 194 31 12 chr5 45672861 45674119 -153956031 + L1MB2 LINE L1 4389 5680 -491 1709 123 3 28 chr5 45674122 45674407 -153955743 - Tigger3(Golem) DNA MER2_type 0 3038 2761 2159 171 6 49 chr5 45674416 45674884 -153955266 + L1MB2 LINE L1 5688 6135 -36 22 0 0 0 chr5 45674890 45674912 -153955238 + AT_rich Low_complexity Low_complexity 1 22 0 370 222 0 0 chr5 45675173 45675245 -153954905 - L2 LINE L2 0 3272 3201 13771 148 24 10 chr5 45675485 45676096 -153954054 - Tigger1 DNA MER2_type 0 2418 1817 2331 78 0 10 chr5 45676096 45676390 -153953760 + AluY SINE Alu 1 291 -20 13771 148 24 10 chr5 45676390 45678161 -153951989 - Tigger1 DNA MER2_type -601 1817 1 261 325 117 0 chr5 45678529 45678649 -153951501 + MIR3 SINE MIR 63 196 -12 739 223 69 6 chr5 45678724 45678899 -153951251 + MER5A DNA MER1_type 1 186 -3 248 232 18 0 chr5 45679192 45679248 -153950902 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 185 321 49 12 chr5 45680042 45680123 -153950027 + MIR SINE MIR 108 191 -71 333 310 41 41 chr5 45680302 45680473 -153949677 - MIR SINE MIR -70 192 22 2378 100 0 0 chr5 45680544 45680853 -153949297 - AluSc SINE Alu 0 309 1 4078 237 56 30 chr5 45680877 45683134 -153947016 + L1ME1 LINE L1 3839 6156 -10 7993 83 4 18 chr5 45683407 45684494 -153945656 + MER11C LTR ERVK 1 1071 0 351 294 153 6 chr5 45684571 45684734 -153945416 + MIR SINE MIR 11 197 -65 180 97 0 0 chr5 45685879 45685910 -153944240 + (T)n Simple_repeat Simple_repeat 1 31 0 1968 143 0 0 chr5 45686650 45686937 -153943213 - AluSx SINE Alu -25 287 1 235 309 15 0 chr5 45687693 45687761 -153942389 + CT-rich Low_complexity Low_complexity 3 71 0 1360 226 50 101 chr5 45688054 45688597 -153941553 - MLT2B1 LTR ERVL 0 520 6 520 14 29 0 chr5 45690115 45690184 -153939966 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 8419 191 12 11 chr5 45691572 45694105 -153936045 + L1PA15 LINE L1 3627 6159 -6 678 152 61 18 chr5 45695887 45696052 -153934098 + MER96B DNA MER1_type? 8 179 -238 2546 126 163 76 chr5 45699205 45699770 -153930380 + LTR18B LTR ERVL 1 614 0 402 207 152 70 chr5 45699941 45700147 -153930003 + MIR SINE MIR 2 212 -50 401 365 30 77 chr5 45703559 45703923 -153926227 - L2 LINE L2 0 3272 2926 1523 205 5 80 chr5 45704170 45704570 -153925580 - MLT1A2 LTR MaLR -4 370 1 378 0 0 0 chr5 45704871 45704913 -153925237 + (TG)n Simple_repeat Simple_repeat 2 43 0 666 297 73 23 chr5 45705127 45705346 -153924804 + MIR SINE MIR 2 231 -31 214 242 10 30 chr5 45705367 45705466 -153924684 + A-rich Low_complexity Low_complexity 3 99 0 225 260 41 0 chr5 45705475 45705598 -153924552 + L1ME4a LINE L1 5994 6121 0 223 260 96 0 chr5 45705693 45705766 -153924384 + MIR SINE MIR 132 211 -51 525 349 74 10 chr5 45705806 45706210 -153923940 + LTR33 LTR ERVL 77 506 -15 217 150 50 0 chr5 45706416 45706456 -153923694 - MIR SINE MIR -9 253 212 697 233 0 0 chr5 45706457 45706607 -153923543 - MER21-int LTR ERV1 -3695 496 347 2688 226 64 29 chr5 45706608 45707356 -153922794 - MER21B LTR ERV1 -47 816 43 237 232 0 134 chr5 45707360 45707442 -153922708 - MER21B LTR ERV1 -775 88 18 638 273 167 0 chr5 45708258 45708456 -153921694 + MIR SINE MIR 2 232 -30 406 203 102 34 chr5 45708632 45708750 -153921400 - L2 LINE L2 -4 3309 3184 268 0 0 0 chr5 45708775 45708807 -153921343 + MLT2A1 LTR ERVL 29 60 -384 652 207 86 6 chr5 45708809 45708846 -153921304 - Ricksha DNA DNA -2863 383 333 31006 80 4 5 chr5 45708846 45713086 -153917064 - HERVL-A1 LTR ERVL 0 5654 1418 11187 70 7 0 chr5 45713222 45714643 -153915507 - HERVL-A1 LTR ERVL -4204 1450 20 2999 102 33 0 chr5 45714649 45715079 -153915071 - MLT2A1 LTR ERVL 0 444 1 241 226 24 60 chr5 45715186 45715270 -153914880 + MIR3 SINE MIR 125 205 -3 676 353 65 37 chr5 45715312 45715666 -153914484 - L2 LINE L2 0 3272 2909 539 336 8 51 chr5 45715703 45715938 -153914212 - MIR SINE MIR -30 232 8 324 335 119 53 chr5 45715932 45716197 -153913953 - L2 LINE L2 -394 2919 2673 * 337 307 193 0 chr5 45716197 45716260 -153913890 + MER5A DNA MER1_type 11 61 -128 1926 87 0 23 chr5 45716260 45716525 -153913625 + AluY SINE Alu 1 259 -52 337 307 193 0 chr5 45716525 45716611 -153913539 + MER5A DNA MER1_type 61 189 0 341 253 213 27 chr5 45716619 45716769 -153913381 + MER5B DNA MER1_type 1 178 0 324 335 119 53 chr5 45716769 45717268 -153912882 - L2 LINE L2 -646 2667 1934 1485 177 22 130 chr5 45717276 45717442 -153912708 - MLT1A1 LTR MaLR -2 363 265 2292 110 51 28 chr5 45717442 45717798 -153912352 + THE1B LTR MaLR 1 364 0 1485 177 22 130 chr5 45717798 45718038 -153912112 - MLT1A1 LTR MaLR -100 265 1 269 294 92 34 chr5 45718414 45718533 -153911617 - L2 LINE L2 -6 3266 3141 1533 167 67 4 chr5 45719260 45719529 -153910621 + AluJo SINE Alu 3 288 -24 1010 164 22 76 chr5 45720554 45720779 -153909371 - MER20 DNA MER1_type -1 218 6 282 56 0 0 chr5 45721426 45721462 -153908688 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 57 0 0 chr5 45724057 45724092 -153906058 + AT_rich Low_complexity Low_complexity 1 35 0 2459 255 55 5 chr5 45724772 45725529 -153904621 + Zaphod DNA AcHobo 66 860 -3171 313 171 14 0 chr5 45725540 45725610 -153904540 + Zaphod DNA AcHobo 3832 3902 -129 227 345 146 18 chr5 45727274 45727384 -153902766 + L2 LINE L2 3142 3265 -7 570 181 76 28 chr5 45727890 45728034 -153902116 + L1MC1 LINE L1 6183 6333 0 1046 154 26 5 chr5 45728089 45728284 -153901866 - L1PA16 LINE L1 -9 6157 5959 1429 212 10 49 chr5 45728284 45728670 -153901480 - L1P LINE L1 -829 5317 4947 3822 223 7 20 chr5 45728671 45729618 -153900532 + L1P LINE L1 4011 4945 -1201 278 315 47 20 chr5 45729662 45729811 -153900339 + L1MEd LINE L1 857 1009 -5363 518 293 151 23 chr5 45729934 45730525 -153899625 + L1MEd LINE L1 1071 1887 -4676 400 270 101 45 chr5 45730586 45730764 -153899386 - L2 LINE L2 -1362 1952 1765 1444 303 44 39 chr5 45730764 45731352 -153898798 - L2 LINE L2 -1691 1623 1033 706 287 96 51 chr5 45731359 45731787 -153898363 - LTR16B LTR ERVL 0 464 18 1279 155 48 0 chr5 45731834 45732069 -153898081 + AluSg/x SINE Alu 68 312 0 180 111 0 0 chr5 45732133 45732160 -153897990 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 392 322 0 26 chr5 45732633 45732748 -153897402 + MIR SINE MIR 26 137 -125 2095 230 29 23 chr5 45732818 45733523 -153896627 - LTR27 LTR ERV1 0 636 3 197 324 111 19 chr5 45734576 45734684 -153895466 - L2 LINE L2 -2882 432 315 2198 110 7 23 chr5 45735125 45735435 -153894715 - AluSx SINE Alu -7 305 1 375 272 128 31 chr5 45736208 45736403 -153893747 + MIR SINE MIR 22 235 -27 1996 183 31 5 chr5 45736439 45736821 -153893329 + L1MC1 LINE L1 5942 6333 0 22 0 0 0 chr5 45736825 45736847 -153893303 + AT_rich Low_complexity Low_complexity 1 22 0 279 224 52 0 chr5 45738088 45738146 -153892004 + L2 LINE L2 3175 3235 -37 2536 121 159 116 chr5 45738281 45738943 -153891207 - L1MA6 LINE L1 -23 6277 5588 * 5226 128 25 15 chr5 45738928 45739286 -153890864 - L1PB4 LINE L1 -3 6856 6503 345 100 0 0 chr5 45739286 45739336 -153890814 + (TG)n Simple_repeat Simple_repeat 2 51 0 5226 128 25 15 chr5 45739336 45739868 -153890282 - L1PB4 LINE L1 -356 6503 5957 1711 115 50 149 chr5 45739883 45740299 -153889851 + THE1C LTR MaLR 1 375 0 5662 238 31 76 chr5 45740299 45741482 -153888668 - L1PB4 LINE L1 -903 5946 4711 2119 162 78 16 chr5 45741482 45741865 -153888285 + MSTB LTR MaLR 1 407 -19 2414 173 14 5 chr5 45741872 45742294 -153887856 - MSTB LTR MaLR 0 426 1 5662 238 31 76 chr5 45742294 45743451 -153886699 - L1PB4 LINE L1 -2144 4705 3497 339 186 0 0 chr5 45743451 45743521 -153886629 + MER41A LTR ERV1 399 468 -86 5662 238 31 76 chr5 45743521 45746952 -153883198 - L1PB4 LINE L1 -3352 3497 433 2343 90 0 31 chr5 45746952 45747273 -153882877 + AluY SINE Alu 1 311 0 5662 238 31 76 chr5 45747273 45747688 -153882462 - L1PB4 LINE L1 -6416 433 1 929 173 0 6 chr5 45747691 45747859 -153882291 - L1M2 LINE L1 -684 5616 5450 2759 173 4 10 chr5 45747867 45748467 -153881683 + L1M1 LINE L1 4844 5442 -744 231 269 154 8 chr5 45748516 45748646 -153881504 + Charlie8 DNA MER1_type 24 172 -2245 30 45 0 0 chr5 45749098 45749142 -153881008 + AT_rich Low_complexity Low_complexity 1 44 0 34 55 0 0 chr5 45750308 45750363 -153879787 + AT_rich Low_complexity Low_complexity 1 55 0 1072 283 87 27 chr5 45750747 45751185 -153878965 + MLT2F LTR ERVL 200 663 0 431 280 106 34 chr5 45751187 45751451 -153878699 - L1MEc LINE L1 -4003 2393 2111 482 286 108 9 chr5 45751638 45751869 -153878281 - L1MEc LINE L1 -4260 2136 1883 308 275 100 42 chr5 45751891 45752011 -153878139 - L1MEc LINE L1 -4531 1684 1558 651 259 17 35 chr5 45752024 45752045 -153878105 - L1P LINE L1 -1507 4639 4619 5193 160 23 22 chr5 45752045 45753574 -153876576 - L1PA15 LINE L1 -3 7600 6069 * 6645 52 17 0 chr5 45753568 45754856 -153875294 - L1PA7 LINE L1 0 6154 4875 651 259 17 35 chr5 45753574 45755092 -153875058 - L1P LINE L1 -1527 4619 4410 1044 219 2 95 chr5 45755154 45755596 -153874554 - L1PA15 LINE L1 -1680 5904 5504 5292 251 44 24 chr5 45755600 45758458 -153871692 - L1PA15 LINE L1 -2918 4666 1667 9304 201 84 23 chr5 45758470 45758552 -153871598 - L1MCa LINE L1 -1793 4633 4557 414 57 0 0 chr5 45758552 45758605 -153871545 + (TG)n Simple_repeat Simple_repeat 1 53 0 9304 201 84 23 chr5 45758605 45761651 -153868499 - L1MCa LINE L1 -1869 4557 1198 2161 83 17 3 chr5 45761651 45761811 -153868339 - AluY SINE Alu -19 292 125 423 0 0 0 chr5 45761811 45761858 -153868292 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2161 83 17 3 chr5 45761858 45761985 -153868165 - AluY SINE Alu -186 125 1 9304 201 84 23 chr5 45761985 45762932 -153867218 - L1MCa LINE L1 -5228 1198 310 274 303 53 37 chr5 45762955 45763390 -153866760 - L1MEc LINE L1 -4873 1523 1082 2082 114 3 14 chr5 45763454 45763743 -153866407 - AluSp SINE Alu -27 286 1 7818 142 24 6 chr5 45763982 45764038 -153866112 - Tigger2 DNA MER2_type -1 2717 2663 4227 58 0 4 chr5 45764038 45764571 -153865579 + L1PA7 LINE L1 5617 6147 -7 7818 142 24 6 chr5 45764571 45765842 -153864308 - Tigger2 DNA MER2_type -55 2663 1366 1360 190 20 70 chr5 45765908 45766308 -153863842 - LTR56 LTR ERV1 -57 388 9 * 7720 137 23 30 chr5 45766302 45767191 -153862959 - Tigger2 DNA MER2_type -1336 1382 505 2721 29 0 3 chr5 45767191 45767499 -153862651 + AluY SINE Alu 1 307 -4 7720 137 23 30 chr5 45767499 45768001 -153862149 - Tigger2 DNA MER2_type -2213 505 1 252 0 0 0 chr5 45768295 45768323 -153861827 + (TG)n Simple_repeat Simple_repeat 1 28 0 183 129 0 0 chr5 45768323 45768354 -153861796 + (TGG)n Simple_repeat Simple_repeat 3 33 0 412 245 180 0 chr5 45769037 45769191 -153860959 - MIR SINE MIR -28 234 53 4144 206 24 5 chr5 45769342 45770276 -153859874 - L1MD2 LINE L1 -13 6346 5396 247 206 131 19 chr5 45770554 45770661 -153859489 - L1MC5 LINE L1 -37 7924 7806 198 0 0 0 chr5 45771660 45771682 -153858468 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 424 182 71 0 chr5 45771906 45772005 -153858145 + L2 LINE L2 3177 3282 -31 1832 231 78 83 chr5 45772009 45772780 -153857370 + LTR41 LTR ERVL 1 767 -6 223 245 0 0 chr5 45772999 45773048 -153857102 - L2 LINE L2 0 3313 3265 182 118 29 0 chr5 45773194 45773228 -153856922 + CT-rich Low_complexity Low_complexity 1 35 0 186 305 207 8 chr5 45773321 45773577 -153856573 - L3b LINE CR1 -171 1412 1106 2023 144 0 13 chr5 45773733 45774038 -153856112 - AluJb SINE Alu -7 305 5 2027 103 15 0 chr5 45774070 45774341 -153855809 - AluSp SINE Alu -18 295 21 367 209 0 44 chr5 45774677 45774768 -153855382 + HsTC2 DNA Tc2 7 93 -1805 195 42 0 0 chr5 45775244 45775268 -153854882 + (CCCCAA)n Simple_repeat Simple_repeat 6 29 0 3822 178 45 29 chr5 45775401 45776171 -153853979 + LTR39 LTR ERV1 1 783 0 181 245 75 0 chr5 45776696 45776749 -153853401 + MIR SINE MIR 139 195 -67 1619 203 14 0 chr5 45778059 45778340 -153851810 + AluJb SINE Alu 7 291 -21 3684 42 0 31 chr5 45779083 45779561 -153850589 + L1PA5 LINE L1 5692 6154 0 238 224 0 0 chr5 45782315 45782364 -153847786 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 2566 66 0 0 chr5 45782859 45783161 -153846989 - AluSp SINE Alu -11 302 1 260 67 0 183 chr5 45784055 45784115 -153846035 + MADE1 DNA Mariner 32 80 0 356 279 96 15 chr5 45784336 45784472 -153845678 + L1MB2 LINE L1 5133 5279 -867 3709 158 42 6 chr5 45784480 45785187 -153844963 + L1MB2 LINE L1 5407 6139 -32 222 203 14 87 chr5 45785717 45785786 -153844364 - L2 LINE L2 -64 3249 3186 2427 65 0 0 chr5 45787388 45787679 -153842471 + AluY SINE Alu 1 291 -20 2355 125 17 3 chr5 45787887 45788246 -153841904 + THE1B LTR MaLR 1 364 0 2406 78 0 23 chr5 45789198 45789507 -153840643 + AluY SINE Alu 1 302 -9 484 259 88 0 chr5 45790201 45790348 -153839802 - L3 LINE CR1 -2 1575 1416 2094 108 0 24 chr5 45790568 45790864 -153839286 - AluSx SINE Alu -15 297 9 12425 33 11 0 chr5 45792099 45794363 -153835787 - L1PA5 LINE L1 -2 6152 3870 11693 36 16 1 chr5 45794363 45795909 -153834241 + L1PA5 LINE L1 2313 3881 -2265 279 283 0 0 chr5 45796090 45796150 -153834000 - L2 LINE L2 -2 3311 3252 426 356 118 35 chr5 45796195 45796996 -153833154 + L2 LINE L2 2154 3017 -255 230 299 299 30 chr5 45797027 45797291 -153832859 - L2 LINE L2 -13 3259 2925 216 0 0 0 chr5 45799752 45799776 -153830374 + (T)n Simple_repeat Simple_repeat 1 24 0 318 262 65 0 chr5 45799803 45799910 -153830240 - HAL1 LINE L1 -145 2362 2249 323 279 23 0 chr5 45801070 45801156 -153828994 + MIR SINE MIR 1 88 -174 281 290 149 0 chr5 45801763 45801870 -153828280 + MIR3 SINE MIR 9 131 -77 1512 182 23 19 chr5 45802087 45802351 -153827799 + AluJo SINE Alu 7 271 -41 182 33 67 0 chr5 45802359 45802389 -153827761 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 507 69 0 0 chr5 45802886 45802958 -153827192 + (CA)n Simple_repeat Simple_repeat 2 73 0 1014 129 0 0 chr5 45804023 45804178 -153825972 + L1MA1 LINE L1 6148 6302 0 21 0 0 0 chr5 45804178 45804199 -153825951 + AT_rich Low_complexity Low_complexity 1 21 0 254 208 0 13 chr5 45805356 45805433 -153824717 + L1M4c LINE L1 1743 1818 -4566 203 339 152 12 chr5 45806010 45806175 -153823975 + MIR SINE MIR 33 220 -42 822 264 67 77 chr5 45806216 45806779 -153823371 - L2 LINE L2 -4 3309 2677 313 309 110 71 chr5 45806915 45807197 -153822953 + L2 LINE L2 2979 3271 -1 219 375 101 31 chr5 45807545 45808062 -153822088 - L2 LINE L2 -573 2741 2189 437 286 25 36 chr5 45808424 45808620 -153821530 - MLT1J LTR MaLR -298 213 20 219 209 15 15 chr5 45809426 45809493 -153820657 + A-rich Low_complexity Low_complexity 5 71 0 432 279 184 15 chr5 45810868 45811069 -153819081 + MIR SINE MIR 28 262 0 377 204 143 20 chr5 45811099 45811197 -153818953 + L2 LINE L2 3194 3303 -10 22 0 0 0 chr5 45812638 45812660 -153817490 + AT_rich Low_complexity Low_complexity 1 22 0 296 268 45 36 chr5 45813860 45813972 -153816178 + MIR SINE MIR 94 206 -56 814 284 96 21 chr5 45814778 45815140 -153815010 + MLT1J1 LTR MaLR 45 433 -13 205 258 32 137 chr5 45815263 45815387 -153814763 + L2 LINE L2 3161 3271 -1 194 347 27 0 chr5 45815941 45816016 -153814134 - L2 LINE L2 -8 3264 3188 466 85 12 12 chr5 45817302 45817384 -153812766 + (TA)n Simple_repeat Simple_repeat 1 82 0 272 328 136 20 chr5 45817415 45817717 -153812433 + L2 LINE L2 1954 2290 -1024 726 272 42 22 chr5 45817734 45818083 -153812067 + MLT1J2 LTR MaLR 1 393 -57 540 332 132 22 chr5 45818090 45818599 -153811551 + L2 LINE L2 2331 2895 -419 1322 205 38 27 chr5 45819073 45819366 -153810784 + AluJo SINE Alu 1 296 -16 1909 107 59 4 chr5 45819398 45819691 -153810459 - AluSx SINE Alu 0 308 1 322 171 0 53 chr5 45821490 45821566 -153808584 + MER116 DNA Mariner 8 79 -1 1558 162 0 84 chr5 45822924 45823232 -153806918 + AluJb SINE Alu 1 282 -30 977 184 82 10 chr5 45823927 45824134 -153806016 + L1MC4a LINE L1 6603 6824 -984 351 315 179 9 chr5 45824658 45824887 -153805263 + MIR SINE MIR 6 256 -6 401 275 8 15 chr5 45825500 45825631 -153804519 + L1ME LINE L1 1785 1914 -4482 181 240 60 20 chr5 45826045 45826095 -153804055 + L3 LINE CR1 1403 1454 -123 343 284 95 0 chr5 45827198 45827346 -153802804 + L1ME LINE L1 5607 5768 -422 929 293 80 61 chr5 45827381 45827955 -153802195 + L1MEc LINE L1 116 700 -5696 561 289 32 0 chr5 45827973 45828163 -153801987 + L1MEc LINE L1 1695 1890 -4506 654 259 18 6 chr5 45828818 45828988 -153801162 - MER5B DNA MER1_type -3 175 4 409 356 43 0 chr5 45829290 45829453 -153800697 + MIR3 SINE MIR 16 185 -23 656 266 101 21 chr5 45829455 45829692 -153800458 + MIR SINE MIR 7 262 0 2429 61 3 10 chr5 45829708 45830021 -153800129 + AluY SINE Alu 1 311 0 257 306 217 25 chr5 45832172 45832329 -153797821 + MIR SINE MIR 3 189 -73 458 212 0 106 chr5 45832335 45832467 -153797683 - L2 LINE L2 -4 3309 3192 1025 205 120 0 chr5 45832468 45832668 -153797482 + MER58A DNA MER1_type 1 224 0 2110 226 158 12 chr5 45832716 45833933 -153796217 - L1MEc LINE L1 -3169 3046 1695 534 300 0 25 chr5 45833951 45834151 -153795999 - L1MEc LINE L1 -5696 700 506 216 0 0 0 chr5 45834152 45834176 -153795974 + (T)n Simple_repeat Simple_repeat 1 24 0 506 181 124 112 chr5 45835282 45835541 -153794609 - L1MC5 LINE L1 -63 7898 7637 246 390 0 21 chr5 45835570 45835665 -153794485 - MIR SINE MIR -78 130 38 6092 88 20 15 chr5 45835781 45835992 -153794158 + L1PA11 LINE L1 5178 5387 -787 2021 144 3 0 chr5 45835992 45836284 -153793866 + AluSx SINE Alu 3 295 -17 6092 88 20 15 chr5 45836284 45837065 -153793085 + L1PA11 LINE L1 5387 6174 0 257 175 105 0 chr5 45837073 45837130 -153793020 + MIR SINE MIR 81 143 -65 210 336 56 65 chr5 45837147 45837254 -153792896 - L2 LINE L2 -5 3267 3162 2327 88 0 0 chr5 45837301 45837597 -153792553 + AluY SINE Alu 1 296 -15 389 306 87 20 chr5 45837708 45837904 -153792246 - L1 LINE L1 -1681 4465 4257 321 323 77 20 chr5 45838276 45838471 -153791679 - L1 LINE L1 -2689 3457 3252 236 324 35 12 chr5 45838550 45838720 -153791430 - L1 LINE L1 -3127 3019 2846 332 342 34 17 chr5 45838888 45839005 -153791145 + MIR3 SINE MIR 3 121 -87 922 201 72 0 chr5 45839009 45839203 -153790947 + MER3 DNA MER1_type 1 208 -1 2296 97 0 0 chr5 45841080 45841368 -153788782 - AluSg SINE Alu -22 288 1 1779 198 29 21 chr5 45842068 45842538 -153787612 - L1MD3 LINE L1 0 7995 7387 274 214 29 57 chr5 45842538 45842608 -153787542 - MLT1F1 LTR MaLR -457 110 43 2927 222 50 59 chr5 45842622 45843419 -153786731 + MER21B LTR ERV1 17 806 -57 424 171 117 0 chr5 45843450 45843561 -153786589 - L1MC3 LINE L1 -699 7086 6963 233 56 0 28 chr5 45843565 45843601 -153786549 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2017 114 0 0 chr5 45843603 45843876 -153786274 - AluY SINE Alu -24 287 15 749 155 39 0 chr5 45894389 45894518 -153735632 + AluSq/x SINE Alu 1 134 -179 21 36 0 0 chr5 45897712 45897740 -153732410 + AT_rich Low_complexity Low_complexity 1 28 0 2070 162 73 5 chr5 45898708 45899103 -153731047 + MSTB LTR MaLR 5 426 0 234 196 20 0 chr5 45899840 45899891 -153730259 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 509 252 181 24 chr5 45901256 45901554 -153728596 + L1ME4a LINE L1 5712 6056 -65 190 329 79 14 chr5 45901762 45901902 -153728248 + L2 LINE L2 2505 2653 -661 817 249 39 0 chr5 45903503 45903732 -153726418 + L1MA4 LINE L1 6059 6296 -4 216 399 86 17 chr5 45905245 45905478 -153724672 + L3 LINE CR1 255 503 -1074 215 256 103 0 chr5 45905808 45905886 -153724264 + L3 LINE CR1 596 681 -896 340 305 86 33 chr5 45906425 45906576 -153723574 + L3 LINE CR1 663 821 -756 2350 256 131 0 chr5 45906681 45907115 -153723035 + L1PA3 LINE L1 5664 6154 -1 24 0 0 0 chr5 45907459 45907483 -153722667 + AT_rich Low_complexity Low_complexity 1 24 0 782 191 0 0 chr5 45907575 45907706 -153722444 - FLAM_A SINE Alu -2 131 1 2140 166 98 5 chr5 45908781 45909208 -153720942 + LTR24 LTR ERV1 1 467 0 339 364 86 25 chr5 45909485 45909647 -153720503 + MIR3 SINE MIR 19 190 -18 2003 104 7 0 chr5 45910115 45910385 -153719765 - AluSx SINE Alu -30 282 11 426 290 150 17 chr5 45910867 45911229 -153718921 + L1ME LINE L1 5347 5758 -363 1812 193 81 3 chr5 45912190 45912801 -153717349 - L1MC/D LINE L1 -698 5926 5261 355 209 110 0 chr5 45913224 45913315 -153716835 - L1MC/D LINE L1 -4262 2164 2064 * 2556 196 22 10 chr5 45913307 45913802 -153716348 - L1MC/D LINE L1 -5905 521 21 275 333 105 7 chr5 45914199 45914352 -153715798 + MIR SINE MIR 15 182 -80 567 222 43 43 chr5 45915795 45915957 -153714193 + MSTB1 LTR MaLR 217 378 -54 685 313 112 24 chr5 45916782 45917274 -153712876 + L2 LINE L2 2171 2705 -609 185 282 51 77 chr5 45917475 45917592 -153712558 + MIR SINE MIR 106 219 -43 2010 84 7 54 chr5 45918194 45918516 -153711634 - AluSq SINE Alu 0 308 1 447 195 214 31 chr5 45918912 45919071 -153711079 - MER58C DNA MER1_type -1 214 27 940 271 58 45 chr5 45921317 45921693 -153708457 + L2 LINE L2 2895 3275 -38 226 296 0 12 chr5 45921862 45921943 -153708207 + L1MC5 LINE L1 7822 7901 -60 398 162 90 27 chr5 45922114 45922225 -153707925 + L1M1 LINE L1 16 133 -7432 8522 125 79 18 chr5 45922234 45922473 -153707677 + L1M1 LINE L1 1522 1745 -5820 279 0 0 0 chr5 45922473 45922504 -153707646 + (GA)n Simple_repeat Simple_repeat 2 32 0 8522 125 79 18 chr5 45922504 45923915 -153706235 + L1M1 LINE L1 1745 3273 -4292 1310 121 0 11 chr5 45923915 45924097 -153706053 + AluSx SINE Alu 1 180 -132 462 82 0 0 chr5 45924097 45924158 -153705992 + AluSp/q SINE Alu 235 295 -18 2314 151 38 32 chr5 45924161 45924980 -153705170 + L1M1 LINE L1 3265 4084 -3481 1643 173 82 20 chr5 45924990 45925442 -153704708 + L1M1 LINE L1 4409 4888 -2677 262 48 0 0 chr5 45925443 45925485 -153704665 + L1MA3 LINE L1 6264 6305 0 2099 132 6 40 chr5 45926634 45926982 -153703168 - MER1B DNA MER1_type -1 336 1 27 0 0 0 chr5 45927135 45927162 -153702988 + AT_rich Low_complexity Low_complexity 1 27 0 707 281 57 18 chr5 45927888 45928116 -153702034 + MIR SINE MIR 10 246 -16 640 198 128 11 chr5 45928626 45928755 -153701395 + MER3 DNA MER1_type 1 160 -49 1575 151 68 11 chr5 45928755 45929033 -153701117 - AluJb SINE Alu -13 299 6 640 198 128 11 chr5 45929033 45929090 -153701060 + MER3 DNA MER1_type 160 209 0 311 296 8 32 chr5 45929090 45929207 -153700943 + MER117 DNA MER1_type 43 158 -39 216 367 57 32 chr5 45932708 45932866 -153697284 - L2 LINE L2 -221 3051 2890 403 286 86 0 chr5 45933062 45933272 -153696878 - L1M4 LINE L1 -1537 4609 4382 1541 274 186 32 chr5 45933862 45935117 -153695033 + L2 LINE L2 1843 3295 -18 26 64 0 0 chr5 45935483 45935530 -153694620 + AT_rich Low_complexity Low_complexity 1 47 0 246 95 0 0 chr5 45935690 45935732 -153694418 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 7056 15 9 0 chr5 45935732 45936589 -153693561 - L1PA3 LINE L1 -10 6145 5281 * 15741 32 1 11 chr5 45936586 45938673 -153691477 + L1PA3 LINE L1 3206 5273 -873 668 175 56 16 chr5 45940626 45940752 -153689398 + FLAM_C SINE Alu 1 131 -2 1159 168 177 37 chr5 45941470 45941798 -153688352 + MLT1A2 LTR MaLR 1 374 0 1806 122 54 44 chr5 45942403 45942698 -153687452 + AluSx SINE Alu 6 303 -9 196 321 0 0 chr5 45943274 45943327 -153686823 - MIR SINE MIR -58 150 98 22 70 0 0 chr5 45943792 45943835 -153686315 + AT_rich Low_complexity Low_complexity 1 43 0 2040 244 55 25 chr5 45944276 45944988 -153685162 + L1ME3A LINE L1 5428 6160 -10 258 304 76 0 chr5 45945176 45945255 -153684895 - L2 LINE L2 -1 3271 3187 1045 275 148 5 chr5 45946505 45946945 -153683205 + L2 LINE L2 2365 2867 -447 592 267 175 51 chr5 45946945 45947357 -153682793 + LTR33 LTR ERVL 13 475 -46 2058 193 10 8 chr5 45948465 45948858 -153681292 + MER44D DNA MER2_type 8 401 -304 1137 174 28 0 chr5 45948856 45949074 -153681076 + MER44D DNA MER2_type 457 552 -53 * 335 23 23 0 chr5 45949418 45949462 -153680688 + (TA)n Simple_repeat Simple_repeat 2 46 0 2056 104 4 0 chr5 45951492 45951762 -153678388 + AluSq SINE Alu 11 281 -32 213 154 0 0 chr5 45951953 45951992 -153678158 + (CA)n Simple_repeat Simple_repeat 2 40 0 1130 172 162 0 chr5 45952392 45952682 -153677468 + MER44D DNA MER2_type 2 608 -1 913 148 136 4 chr5 45952683 45952926 -153677224 - L1MA8 LINE L1 -68 6223 5949 213 397 43 0 chr5 45953171 45953312 -153676838 - L2 LINE L2 -1 3271 3125 301 228 0 13 chr5 45953935 45954014 -153676136 + HAL1 LINE L1 1065 1142 -1365 1048 96 45 0 chr5 45954482 45954659 -153675491 - L1MA1 LINE L1 -102 6200 6016 268 247 83 107 chr5 45955043 45955230 -153674920 + MIR SINE MIR 23 200 -62 22 56 0 0 chr5 45955350 45955386 -153674764 + AT_rich Low_complexity Low_complexity 1 36 0 480 91 0 0 chr5 45956503 45956580 -153673570 - L1PB1 LINE L1 0 6151 6075 198 234 69 122 chr5 45956696 45956884 -153673266 - L2 LINE L2 -38 3275 3098 190 315 136 47 chr5 45956934 45957191 -153672959 - L2 LINE L2 -803 2511 2232 857 173 49 0 chr5 45957389 45957551 -153672599 + MER5A DNA MER1_type 20 189 0 224 328 70 39 chr5 45957662 45957790 -153672360 - L2 LINE L2 -2 3270 3139 2544 4 0 0 chr5 45957880 45958152 -153671998 + AluYa5 SINE Alu 23 294 -17 422 266 149 0 chr5 45960568 45960722 -153669428 + MIR SINE MIR 86 262 0 186 128 0 0 chr5 45961933 45961972 -153668178 + (T)n Simple_repeat Simple_repeat 1 39 0 1955 140 29 18 chr5 45962025 45962136 -153668014 + MER7A DNA MER2_type 2 110 -2928 1551 134 48 70 chr5 45962136 45962449 -153667701 + AluJb SINE Alu 1 306 -6 1955 140 29 18 chr5 45962449 45962680 -153667470 + MER7A DNA MER2_type 110 346 0 244 218 99 40 chr5 45963349 45963450 -153666700 + L2 LINE L2 2682 2788 -526 315 326 12 0 chr5 45963583 45963669 -153666481 + MIR SINE MIR 6 92 -170 673 160 8 0 chr5 45963788 45963907 -153666243 - MLT1A1 LTR MaLR 0 374 255 965 194 95 54 chr5 45963919 45964339 -153665811 + MER57A LTR ERV1 3 403 0 957 195 82 35 chr5 45964339 45964570 -153665580 - MLT1A1 LTR MaLR -123 242 1 2095 121 23 0 chr5 45965150 45965455 -153664695 + AluSx SINE Alu 1 312 0 333 306 156 0 chr5 45966197 45966370 -153663780 + L2 LINE L2 2870 3069 -203 184 257 68 54 chr5 45966445 45966519 -153663631 + L2 LINE L2 3228 3302 -11 2600 150 44 11 chr5 45967428 45967902 -153662248 + L1MB1 LINE L1 5676 6165 -3 843 171 0 42 chr5 45968432 45968725 -153661425 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr5 45969007 45969029 -153661121 + AT_rich Low_complexity Low_complexity 1 22 0 330 276 17 9 chr5 45969339 45969455 -153660695 + L1MC/D LINE L1 5607 5723 -2085 349 338 43 81 chr5 45969576 45969922 -153660228 - L2 LINE L2 -45 3227 2895 1824 120 67 20 chr5 45970089 45970410 -153659740 - MER4B LTR ERV1 -284 495 1 2270 129 22 14 chr5 45970410 45970781 -153659369 - LTR39-int LTR ERV1 0 6758 6385 6585 123 14 37 chr5 45970883 45971992 -153658158 - LTR39-int LTR ERV1 -421 6337 5254 378 82 0 0 chr5 45971992 45972041 -153658109 + L1PA13 LINE L1 5899 5947 -227 3987 141 19 20 chr5 45972057 45972747 -153657403 - MER50 LTR ERV1 -39 695 7 1543 78 37 0 chr5 45972747 45972964 -153657186 + L1PA13 LINE L1 5938 6162 -1 1670 160 19 4 chr5 45972969 45973238 -153656912 + AluSx SINE Alu 16 288 -24 713 129 0 9 chr5 45973256 45973372 -153656778 - LTR39-int LTR ERV1 -1495 5263 5149 * 17585 143 52 35 chr5 45973364 45977655 -153652495 - LTR39-int LTR ERV1 -2050 4708 238 975 160 17 17 chr5 45977698 45977879 -153652271 - LTR39-int LTR ERV1 -6473 285 105 929 221 28 14 chr5 45978332 45978545 -153651605 - MER58A DNA MER1_type 0 224 9 505 228 81 15 chr5 45978649 45978785 -153651365 + L1M4b LINE L1 24 168 -6691 3919 179 44 12 chr5 45978793 45979523 -153650627 - LTR39 LTR ERV1 -30 753 1 5140 139 30 32 chr5 45979543 45979868 -153650282 + MER4D LTR ERV1 1 325 -578 2004 128 50 0 chr5 45979868 45980165 -153649985 - AluSx SINE Alu 0 312 1 5140 139 30 32 chr5 45980165 45980744 -153649406 + MER4D LTR ERV1 325 903 0 2462 223 89 42 chr5 45980753 45981497 -153648653 + L1M4b LINE L1 823 1623 -5232 1703 188 3 7 chr5 45981497 45981806 -153648344 + AluJo SINE Alu 1 308 -4 2462 223 89 42 chr5 45981806 45982103 -153648047 + L1M4b LINE L1 1623 1904 -4951 1995 150 7 3 chr5 45982103 45982410 -153647740 + AluSx SINE Alu 1 308 -4 254 49 0 49 chr5 45982420 45982461 -153647689 + (GGGAA)n Simple_repeat Simple_repeat 1 39 0 1238 275 26 28 chr5 45982464 45982966 -153647184 + L1M4b LINE L1 1849 2349 -4610 3348 189 9 19 chr5 45982969 45983691 -153646459 + L1MB7 LINE L1 5219 5932 -252 323 182 0 0 chr5 45983691 45983746 -153646404 - MER3 DNA MER1_type -154 55 1 535 272 0 7 chr5 45983931 45984067 -153646083 - MLT1D LTR MaLR 0 505 371 586 189 19 0 chr5 45984948 45985054 -153645096 + MLT1D LTR MaLR 28 135 -370 273 328 109 0 chr5 45985236 45985355 -153644795 - L2 LINE L2 0 3313 3182 1512 217 7 0 chr5 45986211 45986511 -153643639 - AluJo SINE Alu -6 306 5 408 310 94 35 chr5 45986881 45987220 -153642930 + L2 LINE L2 2507 2865 -449 576 123 19 0 chr5 45987509 45987615 -153642535 - L1MB8 LINE L1 0 6178 6071 35 0 0 0 chr5 45987615 45987650 -153642500 + AT_rich Low_complexity Low_complexity 1 35 0 3534 195 39 15 chr5 45987672 45988105 -153642045 - L1MB7 LINE L1 -106 6078 5657 1673 166 58 47 chr5 45988105 45988466 -153641684 - MLT1A1 LTR MaLR 0 365 1 3534 195 39 15 chr5 45988466 45989008 -153641142 - L1MB7 LINE L1 -527 5657 5083 507 195 0 68 chr5 45989043 45989161 -153640989 + MLT1C LTR MaLR 353 462 -5 785 225 107 37 chr5 45989232 45989539 -153640611 - MLT1D LTR MaLR -134 333 1 24 32 0 0 chr5 45989624 45989655 -153640495 + AT_rich Low_complexity Low_complexity 1 31 0 1532 182 42 3 chr5 45989752 45990038 -153640112 + AluJb SINE Alu 6 302 -10 592 305 95 6 chr5 45990076 45990414 -153639736 - L1ME4a LINE L1 -234 5887 5520 2815 10 0 3 chr5 45990443 45990752 -153639398 - AluYa5 SINE Alu -3 308 1 1914 158 0 16 chr5 45991250 45991567 -153638583 - AluSx SINE Alu 0 312 1 213 246 197 16 chr5 45992377 45992438 -153637712 - L2 LINE L2 -33 3239 3168 189 0 0 0 chr5 45994523 45994544 -153635606 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1083 160 11 0 chr5 45994578 45994759 -153635391 - AluJb SINE Alu -129 183 1 471 313 16 26 chr5 45998139 45998355 -153631795 - MIR3 SINE MIR -21 241 30 25 31 0 0 chr5 45999818 45999850 -153630300 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr5 45999990 46000014 -153630136 + AT_rich Low_complexity Low_complexity 1 24 0 202 286 27 15 chr5 46000451 46000562 -153629588 + MIR SINE MIR 34 212 -50 23 78 0 0 chr5 46000600 46000651 -153629499 + AT_rich Low_complexity Low_complexity 1 51 0 1911 135 55 30 chr5 46001638 46002001 -153628149 - THE1C LTR MaLR -3 372 1 687 291 62 34 chr5 46002283 46002575 -153627575 - MLT1J LTR MaLR -211 300 1 290 310 46 11 chr5 46002661 46002748 -153627402 - MIR SINE MIR -105 157 68 604 128 0 0 chr5 46003559 46003692 -153626458 + AluSg/x SINE Alu 194 326 0 1307 153 48 71 chr5 46003706 46003974 -153626176 + AluJo SINE Alu 37 298 -14 486 76 1 40 chr5 46004527 46004623 -153625527 + L1MA4A LINE L1 5970 6072 -231 2220 128 14 8 chr5 46004665 46005018 -153625132 - THE1A LTR MaLR 0 355 1 319 276 0 0 chr5 46005389 46005465 -153624685 - MIR SINE MIR -56 152 77 22 0 0 0 chr5 46005535 46005557 -153624593 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr5 46007086 46007129 -153623021 + AT_rich Low_complexity Low_complexity 1 43 0 247 369 14 27 chr5 46008190 46008412 -153621738 + L2 LINE L2 2149 2367 -947 226 220 40 0 chr5 46009109 46009159 -153620991 + L2 LINE L2 3219 3270 -2 631 265 107 47 chr5 46009608 46009861 -153620289 - L2 LINE L2 -4 3309 3042 22 0 0 0 chr5 46010627 46010649 -153619501 + AT_rich Low_complexity Low_complexity 1 22 0 724 258 79 25 chr5 46010948 46011188 -153618962 + MIR SINE MIR 7 259 -3 284 291 166 7 chr5 46011667 46011784 -153618366 + L1MC4a LINE L1 5779 5876 -1932 204 40 0 0 chr5 46011784 46011809 -153618341 + (TG)n Simple_repeat Simple_repeat 2 26 0 284 291 166 7 chr5 46011809 46011980 -153618170 + L1MC4a LINE L1 5876 6113 -1695 294 260 41 0 chr5 46012405 46012478 -153617672 + L1MC4a LINE L1 6704 6779 -1029 778 186 0 14 chr5 46012756 46012901 -153617249 + FLAM_C SINE Alu 1 143 0 616 241 121 39 chr5 46012952 46013383 -153616767 + L1MC5 LINE L1 7452 7917 -44 365 320 122 52 chr5 46014227 46014767 -153615383 - L1M2 LINE L1 -5396 1453 876 2482 60 0 0 chr5 46015485 46015784 -153614366 + AluY SINE Alu 1 299 -12 185 261 62 15 chr5 46015900 46015965 -153614185 + L3b LINE CR1 1173 1240 -343 194 333 235 8 chr5 46016497 46016629 -153613521 + MIR3 SINE MIR 38 199 -9 413 304 71 10 chr5 46016889 46017082 -153613068 - MIR SINE MIR -4 258 51 26 50 0 0 chr5 46017162 46017202 -153612948 + AT_rich Low_complexity Low_complexity 1 40 0 2582 55 0 0 chr5 46017519 46017827 -153612323 - AluY SINE Alu -3 308 1 987 143 67 48 chr5 46018362 46018571 -153611579 - MER20 DNA MER1_type -2 217 5 237 315 65 19 chr5 46019733 46019841 -153610309 - L2 LINE L2 -218 3054 2942 2334 60 43 7 chr5 46019849 46020148 -153610002 - AluY SINE Alu 0 311 2 459 316 103 83 chr5 46020270 46020725 -153609425 - L2 LINE L2 -559 2755 2292 437 270 104 0 chr5 46020727 46020842 -153609308 + L2 LINE L2 3187 3313 0 194 182 23 45 chr5 46020873 46020917 -153609233 - L2 LINE L2 -1045 2269 2227 450 339 40 91 chr5 46020951 46021553 -153608597 - L2 LINE L2 -2657 657 87 251 385 45 0 chr5 46021838 46021994 -153608156 - L2 LINE L2 -614 2700 2538 324 326 38 0 chr5 46022168 46022300 -153607850 - MIR SINE MIR -16 246 110 1807 152 18 11 chr5 46022425 46022708 -153607442 - AluJb SINE Alu -24 288 4 346 258 42 84 chr5 46023641 46023821 -153606329 - MER5A DNA MER1_type -1 188 4 21 57 0 0 chr5 46024116 46024151 -153605999 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 46024411 46024434 -153605716 + AT_rich Low_complexity Low_complexity 1 23 0 705 266 13 0 chr5 46024436 46024590 -153605560 + L1MCc LINE L1 348 503 -5920 1832 266 73 65 chr5 46024667 46025480 -153604670 + L1MCc LINE L1 654 1459 -5482 1585 154 4 4 chr5 46025480 46025726 -153604424 + AluJb SINE Alu 37 282 -30 1832 266 73 65 chr5 46025726 46026026 -153604124 + L1MCc LINE L1 1459 1755 -5186 796 194 109 47 chr5 46026026 46026237 -153603913 - MER58A DNA MER1_type 0 224 1 1832 266 73 65 chr5 46026237 46026654 -153603496 + L1MCc LINE L1 1755 2201 -4740 255 143 24 0 chr5 46026665 46026707 -153603443 - MSTD LTR MaLR 0 396 354 938 223 98 65 chr5 46026842 46027179 -153602971 - MSTD LTR MaLR -48 348 1 509 276 18 0 chr5 46027179 46027342 -153602808 + L1MCc LINE L1 2395 2560 -4562 602 280 68 16 chr5 46027348 46027716 -153602434 + L1MCc LINE L1 2600 2986 -4136 1849 236 92 27 chr5 46027719 46028303 -153601847 - MLT1E3 LTR MaLR -2 622 1 277 226 48 12 chr5 46028303 46028387 -153601763 + L1MCc LINE L1 2983 3069 -4053 2123 144 0 3 chr5 46029031 46029344 -153600806 - AluJb SINE Alu 0 312 1 2104 121 7 3 chr5 46029459 46029756 -153600394 - AluSx SINE Alu -14 298 1 416 244 61 9 chr5 46032179 46032294 -153597856 - MIR SINE MIR -32 230 110 372 348 30 30 chr5 46032500 46032664 -153597486 + MIR SINE MIR 10 173 -89 1904 158 62 27 chr5 46032938 46033311 -153596839 + MLT1B LTR MaLR 1 386 -4 231 384 54 0 chr5 46033506 46033618 -153596532 + L2 LINE L2 2670 2787 -527 350 329 19 6 chr5 46034175 46034336 -153595814 + L1ME LINE L1 5558 5720 -401 337 310 17 17 chr5 46034416 46034532 -153595618 + L2 LINE L2 3196 3311 -2 6907 51 41 1 chr5 46034610 46035473 -153594677 + MER11D LTR ERVK 1 897 0 690 237 73 0 chr5 46037159 46037336 -153592814 + MER3 DNA MER1_type 3 192 -17 2398 74 3 0 chr5 46037340 46037637 -153592513 - AluY SINE Alu -13 298 1 443 255 87 19 chr5 46037841 46038049 -153592101 - L1MEc LINE L1 -4519 1877 1656 12119 62 3 2 chr5 46038050 46040429 -153589721 + L1PA7 LINE L1 3774 6154 0 250 260 15 87 chr5 46041470 46041666 -153588484 - L1M4 LINE L1 -2636 3510 3329 848 184 12 86 chr5 46041695 46041940 -153588210 - L1MB8 LINE L1 -60 6118 5892 232 258 98 18 chr5 46041961 46042124 -153588026 - L1MEc LINE L1 -5099 1106 931 2091 48 11 4 chr5 46042202 46042475 -153587675 - L1PA4 LINE L1 -2 6153 5879 2706 54 0 0 chr5 46042475 46042807 -153587343 + L1PA4 LINE L1 5560 5891 -263 354 326 54 14 chr5 46043543 46043690 -153586460 - MIR3 SINE MIR -16 192 40 234 67 44 0 chr5 46045574 46045619 -153584531 - LTR66 LTR ERVL -170 440 394 243 141 14 28 chr5 46045619 46045690 -153584460 + (TA)n Simple_repeat Simple_repeat 2 71 0 941 175 0 65 chr5 46045711 46045911 -153584239 + MLT1B LTR MaLR 1 187 -203 411 21 0 0 chr5 46048052 46048100 -153582050 + (TG)n Simple_repeat Simple_repeat 2 49 0 1509 180 10 13 chr5 46048449 46048754 -153581396 - L1MB3 LINE L1 -17 6166 5863 2162 170 21 45 chr5 46048782 46048906 -153581244 - L1MB3 LINE L1 -247 5936 5811 2053 121 0 33 chr5 46048906 46049211 -153580939 + AluSg SINE Alu 4 298 -12 2162 170 21 45 chr5 46049211 46049557 -153580593 - L1MB3 LINE L1 -372 5811 5477 1626 62 5 0 chr5 46049564 46049773 -153580377 - L1PA7 LINE L1 -1 6153 5944 1174 224 64 46 chr5 46049835 46050224 -153579926 + MSTD LTR MaLR 1 396 0 228 35 0 0 chr5 46051016 46051045 -153579105 + (TG)n Simple_repeat Simple_repeat 2 30 0 243 313 15 0 chr5 46051414 46051481 -153578669 + MIR SINE MIR 2 69 -193 1574 155 102 0 chr5 46051716 46051980 -153578170 + AluJb SINE Alu 1 291 -21 304 313 174 25 chr5 46053175 46053376 -153576774 + MIR SINE MIR 16 246 -16 22 70 0 0 chr5 46053628 46053671 -153576479 + AT_rich Low_complexity Low_complexity 1 43 0 1152 265 77 33 chr5 46053725 46053962 -153576188 + MER97c DNA MER1_type? 1 263 -827 183 42 0 0 chr5 46053962 46053986 -153576164 + (TG)n Simple_repeat Simple_repeat 1 24 0 1152 265 77 33 chr5 46053986 46054137 -153576013 + MER97c DNA MER1_type? 263 406 -684 557 311 66 55 chr5 46054932 46055279 -153574871 + MLT1L LTR MaLR 203 553 -62 1870 119 3 25 chr5 46055509 46055794 -153574356 - AluSx SINE Alu -32 280 2 2406 82 3 0 chr5 46056002 46056306 -153573844 - AluSc SINE Alu 0 309 5 212 284 171 11 chr5 46056506 46056594 -153573556 + L2 LINE L2 3170 3271 -1 197 336 112 8 chr5 46056668 46056802 -153573348 - L2 LINE L2 -507 2807 2660 7007 61 3 0 chr5 46056911 46058496 -153571654 + L1PA7 LINE L1 4566 6154 0 250 260 15 87 chr5 46059537 46059733 -153570417 - L1MCc LINE L1 -2636 4305 4124 848 184 12 86 chr5 46059762 46060007 -153570143 - L1MB8 LINE L1 -60 6118 5892 232 258 98 18 chr5 46060028 46060191 -153569959 - L1ME LINE L1 -5099 1832 1657 7661 28 0 0 chr5 46060269 46061196 -153568954 - L1PA3 LINE L1 -2 6153 5227 3076 257 82 29 chr5 46062601 46063730 -153566420 + L1MEc LINE L1 22 1209 -5187 973 286 57 25 chr5 46063732 46063972 -153566178 - L1MCc LINE L1 -4681 2441 2210 2169 132 3 0 chr5 46063972 46064283 -153565867 - AluSx SINE Alu 0 312 1 973 286 57 25 chr5 46064283 46064637 -153565513 - L1MCc LINE L1 -4912 2210 1828 273 139 46 37 chr5 46064656 46064764 -153565386 + (TTATA)n Simple_repeat Simple_repeat 3 111 0 833 293 64 14 chr5 46064802 46065217 -153564933 - L1MCc LINE L1 -4933 1490 1172 6483 170 31 11 chr5 46065241 46065403 -153564747 - L1MA8 LINE L1 -5 7307 7150 2467 61 3 0 chr5 46065403 46065699 -153564451 - AluY SINE Alu -9 302 6 6483 170 31 11 chr5 46065699 46067953 -153562197 - L1MA8 LINE L1 -162 7150 4843 995 262 40 45 chr5 46067947 46068684 -153561466 - L1MA8 LINE L1 -4784 2314 1561 * 321 374 12 18 chr5 46069261 46069424 -153560726 - L1MA8 LINE L1 -5967 1131 970 227 336 20 34 chr5 46069470 46069619 -153560531 - L1MCc LINE L1 -5279 1144 998 247 308 9 28 chr5 46069825 46069932 -153560218 - L1MCc LINE L1 -5347 1076 972 701 295 70 38 chr5 46070000 46070400 -153559750 - L1MCc LINE L1 -5987 436 24 202 141 28 42 chr5 46070447 46070518 -153559632 + (TA)n Simple_repeat Simple_repeat 2 71 0 2258 154 65 22 chr5 46070700 46071116 -153559034 - Tigger2a DNA MER2_type 0 434 1 680 129 0 0 chr5 46071142 46071243 -153558907 - HY3 scRNA scRNA 0 101 1 7576 35 0 0 chr5 46071910 46072835 -153557315 - L1PA4 LINE L1 -744 5402 4478 6001 43 28 0 chr5 46072835 46073584 -153556566 + L1PA4 LINE L1 5382 6154 -1 401 186 70 0 chr5 46076701 46076787 -153553363 - MSTD LTR MaLR 0 396 305 328 295 63 14 chr5 46076789 46076958 -153553192 - L1ME3A LINE L1 -318 5852 5676 462 272 52 0 chr5 46077520 46077656 -153552494 - L1ME3A LINE L1 -519 5643 5501 445 270 63 140 chr5 46077681 46078396 -153551754 + L1MC4 LINE L1 7098 7757 -285 375 23 0 0 chr5 46078481 46078525 -153551625 + (TG)n Simple_repeat Simple_repeat 2 45 0 491 187 23 14 chr5 46079210 46080683 -153549467 + L1P4 LINE L1 3985 5558 -608 1463 196 0 15 chr5 46080683 46080943 -153549207 + AluJb SINE Alu 14 269 -43 491 187 23 14 chr5 46080943 46081026 -153549124 + L1P4 LINE L1 5558 5639 -527 1587 246 58 51 chr5 46081156 46082279 -153547871 - L1MCc LINE L1 -4564 2377 1145 586 270 167 15 chr5 46082290 46082620 -153547530 - L1MCc LINE L1 -5930 493 114 227 311 47 28 chr5 46082792 46082898 -153547252 - MIR SINE MIR -94 168 61 488 141 0 0 chr5 46082945 46083030 -153547120 - L1MB2 LINE L1 -9 6162 6078 2676 164 5 5 chr5 46083070 46083496 -153546654 - MSTB LTR MaLR 0 426 1 8076 167 35 71 chr5 46083501 46084935 -153545215 - MSTB-int LTR MaLR -5 1646 205 577 117 0 0 chr5 46084935 46085012 -153545138 - AluS SINE Alu -234 79 3 8076 167 35 71 chr5 46085012 46085210 -153544940 - MSTB-int LTR MaLR -1446 205 1 2228 199 5 21 chr5 46085210 46085643 -153544507 - MSTB LTR MaLR 0 426 1 265 255 34 40 chr5 46085684 46085833 -153544317 - L1ME4a LINE L1 -32 6089 5942 249 373 108 7 chr5 46085884 46086163 -153543987 - L3 LINE CR1 -568 1009 703 973 255 5 0 chr5 46086742 46086946 -153543204 + MER63A DNA MER1_type 6 210 0 386 296 109 19 chr5 46088078 46088399 -153541751 - L1ME4a LINE L1 0 6121 5772 451 250 72 62 chr5 46088413 46088621 -153541529 + MER46C DNA MER2_type 1 210 -128 23 54 0 0 chr5 46088652 46088689 -153541461 + AT_rich Low_complexity Low_complexity 1 37 0 373 309 170 22 chr5 46088713 46088936 -153541214 - L1ME4a LINE L1 -365 5756 5501 23 0 0 0 chr5 46088942 46088965 -153541185 + AT_rich Low_complexity Low_complexity 1 23 0 212 171 0 0 chr5 46088981 46089022 -153541128 + T-rich Low_complexity Low_complexity 1 41 0 5932 70 37 6 chr5 46089032 46089847 -153540303 - L1PA5 LINE L1 -8 6146 5307 31 0 0 0 chr5 46089856 46089887 -153540263 + AT_rich Low_complexity Low_complexity 1 31 0 3764 78 0 2 chr5 46089993 46090495 -153539655 - L1PA7 LINE L1 0 6154 5654 28 29 0 0 chr5 46091122 46091157 -153538993 + AT_rich Low_complexity Low_complexity 1 35 0 1017 98 0 14 chr5 46091943 46092086 -153538064 - AluSg1 SINE Alu -168 141 1 275 339 50 41 chr5 46092273 46092491 -153537659 + L2 LINE L2 2550 2769 -545 306 325 111 0 chr5 46092895 46093021 -153537129 + MIR SINE MIR 31 170 -92 289 160 0 0 chr5 46094986 46095036 -153535114 - MADE1 DNA Mariner -30 50 1 5838 162 19 24 chr5 46095036 46096120 -153534030 - L1MCa LINE L1 -5328 1098 21 310 333 91 6 chr5 46096189 46096354 -153533796 + L1 LINE L1 2629 2807 -3339 27 29 0 0 chr5 46096671 46096705 -153533445 + AT_rich Low_complexity Low_complexity 1 34 0 301 320 140 81 chr5 46097562 46097834 -153532316 - L2 LINE L2 0 3272 2985 340 338 128 46 chr5 46098337 46099072 -153531078 + L2 LINE L2 675 1481 -1833 2262 72 3 0 chr5 46099072 46099363 -153530787 + AluSp SINE Alu 1 292 -21 340 338 128 46 chr5 46099363 46099425 -153530725 + L2 LINE L2 1481 1537 -1777 397 240 146 0 chr5 46100402 46100498 -153529652 - L2 LINE L2 -4 3309 3200 1314 170 32 3 chr5 46100572 46100855 -153529295 - L1MA9 LINE L1 0 6312 6022 2859 98 15 75 chr5 46100856 46101326 -153528824 - MLT2A1 LTR ERVL -2 442 1 35709 78 9 3 chr5 46101326 46105947 -153524203 - HERVL-A1 LTR ERVL 0 5654 1005 2014 84 14 3 chr5 46105947 46106296 -153523854 - HERVL-A1 LTR ERVL -4950 704 261 2164 62 11 0 chr5 46106346 46106621 -153523529 - HERVL-A1 LTR ERVL -5375 279 2 364 48 34 3 chr5 46106622 46106681 -153523469 - MLT2A1 LTR ERVL 0 444 390 209 132 26 0 chr5 46106681 46106719 -153523431 + (TA)n Simple_repeat Simple_repeat 2 40 0 238 241 23 0 chr5 46106732 46106819 -153523331 - L1MC4 LINE L1 -1340 6702 6614 2786 105 15 5 chr5 46106831 46107231 -153522919 - MLT2A1 LTR ERVL -40 404 1 2129 142 5 36 chr5 46107235 46107623 -153522527 - L1MA9 LINE L1 -296 6016 5641 305 86 0 69 chr5 46107623 46107674 -153522476 + L1PA16 LINE L1 6113 6166 0 4317 184 35 52 chr5 46107674 46108489 -153521661 - L1MA9 LINE L1 -798 5348 4521 276 30 0 0 chr5 46108489 46108522 -153521628 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 1878 144 0 7 chr5 46108522 46108806 -153521344 - AluSx SINE Alu -30 282 1 4317 184 35 52 chr5 46108806 46108980 -153521170 - L1MA9 LINE L1 -1624 4522 4377 1694 138 28 38 chr5 46108980 46109269 -153520881 - AluSx SINE Alu -26 286 1 4317 184 35 52 chr5 46109269 46109442 -153520708 - L1MA9 LINE L1 -1769 4377 4203 262 319 17 17 chr5 46109509 46109625 -153520525 + MIR SINE MIR 141 256 -6 223 96 27 55 chr5 46109935 46110008 -153520142 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 188 200 18 91 chr5 46110041 46110096 -153520054 + L2 LINE L2 3263 3313 0 206 326 43 35 chr5 46110347 46110488 -153519662 - MIR SINE MIR -61 201 60 233 386 114 19 chr5 46110519 46110729 -153519421 - MLT1K LTR MaLR -356 232 3 189 0 0 0 chr5 46110781 46110802 -153519348 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2042 46 11 0 chr5 46110807 46111067 -153519083 - L1PA5 LINE L1 -13 6141 5879 2706 54 0 0 chr5 46111067 46111399 -153518751 + L1PA5 LINE L1 5560 5891 -263 354 326 54 14 chr5 46112136 46112283 -153517867 - MIR3 SINE MIR -16 192 40 234 67 44 0 chr5 46114161 46114206 -153515944 - LTR66 LTR ERVL -170 440 394 243 141 14 28 chr5 46114206 46114277 -153515873 + (TA)n Simple_repeat Simple_repeat 2 71 0 941 175 0 65 chr5 46114298 46114498 -153515652 + MLT1B LTR MaLR 1 187 -203 429 20 0 0 chr5 46116639 46116689 -153513461 + (TG)n Simple_repeat Simple_repeat 2 51 0 1509 180 10 13 chr5 46117038 46117343 -153512807 - L1MB3 LINE L1 -17 6166 5863 2193 170 21 45 chr5 46117371 46117495 -153512655 - L1MB3 LINE L1 -247 5936 5811 2053 121 0 33 chr5 46117495 46117800 -153512350 + AluSg SINE Alu 4 298 -12 2193 170 21 45 chr5 46117800 46118146 -153512004 - L1MB3 LINE L1 -372 5811 5477 1614 62 5 0 chr5 46118153 46118362 -153511788 - L1PA7 LINE L1 -1 6153 5944 1151 224 64 46 chr5 46118424 46118813 -153511337 + MSTD LTR MaLR 1 396 0 228 35 0 0 chr5 46119599 46119628 -153510522 + (TG)n Simple_repeat Simple_repeat 2 30 0 239 313 15 0 chr5 46119997 46120064 -153510086 + MIR SINE MIR 2 69 -193 1545 155 102 0 chr5 46120299 46120563 -153509587 + AluJb SINE Alu 1 291 -21 302 313 174 25 chr5 46121758 46121959 -153508191 + MIR SINE MIR 16 246 -16 22 70 0 0 chr5 46122211 46122254 -153507896 + AT_rich Low_complexity Low_complexity 1 43 0 1187 268 77 31 chr5 46122308 46122545 -153507605 + MER97c DNA MER1_type? 1 264 -826 183 42 0 0 chr5 46122545 46122569 -153507581 + (TG)n Simple_repeat Simple_repeat 1 24 0 1187 268 77 31 chr5 46122569 46122719 -153507431 + MER97c DNA MER1_type? 264 406 -684 578 311 66 55 chr5 46123515 46123862 -153506288 + MLT1L LTR MaLR 203 553 -62 417 247 141 55 chr5 46123837 46124128 -153506022 - Charlie7 DNA MER1_type -188 2424 2109 * 207 0 0 0 chr5 46124671 46124694 -153505456 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 3069 153 22 13 chr5 46124710 46125265 -153504885 - L1PA16 LINE L1 0 6166 5607 207 198 41 41 chr5 46125359 46125480 -153504670 + (TATAA)n Simple_repeat Simple_repeat 3 123 0 388 320 201 8 chr5 46125570 46125814 -153504336 + L1M4 LINE L1 3628 3918 -2228 506 213 57 0 chr5 46126262 46126384 -153503766 + MER3 DNA MER1_type 41 122 -87 1104 181 122 0 chr5 46126393 46126680 -153503470 + MER3 DNA MER1_type 2264 2585 0 2105 119 3 28 chr5 46126680 46127000 -153503150 + AluSx SINE Alu 1 312 0 345 302 82 33 chr5 46127737 46127919 -153502231 - MLT1J LTR MaLR 0 511 321 308 214 34 34 chr5 46127982 46128071 -153502079 - MLT1J LTR MaLR -325 186 98 1363 335 118 25 chr5 46128119 46128882 -153501268 - L2 LINE L2 -218 3054 2220 17810 159 25 17 chr5 46131687 46137186 -153492964 - L1MA2 LINE L1 0 7723 2270 7835 32 0 1 chr5 46137186 46138893 -153491257 + L1PA4 LINE L1 4447 6152 -3 17810 159 25 17 chr5 46138893 46139331 -153490819 - L1MA2 LINE L1 -5453 2270 1837 387 0 0 0 chr5 46139331 46139374 -153490776 + (TG)n Simple_repeat Simple_repeat 2 44 0 17810 159 25 17 chr5 46139374 46140651 -153489499 - L1MA2 LINE L1 -5886 1837 459 7842 123 37 4 chr5 46140653 46142698 -153487452 - L1PA8 LINE L1 -6 6166 4051 2819 203 54 4 chr5 46142698 46143403 -153486747 - Charlie1 DNA MER1_type -715 2046 1 249 203 72 0 chr5 46143685 46143754 -153486396 + MER58B DNA MER1_type 127 326 -15 3482 161 20 2 chr5 46144689 46145281 -153484869 + LTR26 LTR ERV1 1 603 0 2247 160 28 14 chr5 46145746 46146183 -153483967 - L1MA3 LINE L1 -3 6302 5860 483 300 59 5 chr5 46146609 46146827 -153483323 + L2 LINE L2 2782 3009 -304 1583 208 185 55 chr5 46146891 46147421 -153482729 + MLT1E1 LTR MaLR 56 654 0 588 291 35 28 chr5 46147425 46147679 -153482471 + L2 LINE L2 3058 3313 0 33 43 0 0 chr5 46148886 46148933 -153481217 + AT_rich Low_complexity Low_complexity 1 47 0 24 0 0 0 chr5 46149271 46149295 -153480855 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr5 46149567 46149603 -153480547 + AT_rich Low_complexity Low_complexity 1 36 0 396 237 42 89 chr5 46149691 46149881 -153480269 - MER112 DNA MER1_type -25 235 55 421 320 103 0 chr5 46149983 46150186 -153479964 + MIR SINE MIR 10 233 -29 8535 241 61 10 chr5 46150591 46153303 -153476847 + L1M4 LINE L1 2402 5253 -893 192 152 0 0 chr5 46154100 46154133 -153476017 + GA-rich Low_complexity Low_complexity 4 36 0 836 255 51 56 chr5 46154292 46155019 -153475131 - L2 LINE L2 0 3313 2040 1416 258 63 7 chr5 46155185 46155630 -153474520 + L1PA12 LINE L1 1 470 -7111 * 5250 135 28 27 chr5 46155626 46156194 -153473956 + L1PA15 LINE L1 5200 5770 -395 1370 207 70 0 chr5 46156194 46156465 -153473685 + AluJb SINE Alu 3 292 -20 5250 135 28 27 chr5 46156465 46156861 -153473289 + L1PA15 LINE L1 5770 6164 -1 2693 154 56 33 chr5 46157025 46157506 -153472644 - Ricksha DNA DNA -1547 499 8 419 274 121 56 chr5 46160498 46160846 -153469304 - L2 LINE L2 0 3313 2854 3440 226 94 16 chr5 46161026 46161835 -153468315 + Charlie2a DNA MER1_type 1570 2505 -357 189 74 0 0 chr5 46161835 46161862 -153468288 + (TG)n Simple_repeat Simple_repeat 2 28 0 3440 226 94 16 chr5 46161862 46162250 -153467900 + Charlie2a DNA MER1_type 2505 2861 -1 26 0 0 0 chr5 46162939 46162965 -153467185 + AT_rich Low_complexity Low_complexity 1 26 0 871 112 16 0 chr5 46163591 46163716 -153466434 - AluSg/x SINE Alu -19 293 167 663 263 78 4 chr5 46163757 46164000 -153466150 - L1ME3 LINE L1 -42 6120 5860 1883 152 9 9 chr5 46164108 46164424 -153465726 - L1MB1 LINE L1 -162 6006 5691 750 152 38 0 chr5 46164426 46164558 -153465592 + L1MB1 LINE L1 6023 6159 -9 662 282 52 20 chr5 46164743 46164995 -153465155 + MLT1I LTR MaLR 147 406 -3 30 59 0 0 chr5 46165291 46165342 -153464808 + AT_rich Low_complexity Low_complexity 1 51 0 2077 91 21 3 chr5 46165480 46165765 -153464385 - AluSg SINE Alu -20 290 1 190 171 0 0 chr5 46166937 46166972 -153463178 - MIR SINE MIR -55 207 173 2740 215 54 39 chr5 46167165 46167979 -153462171 + LTR1B LTR ERV1 1 826 0 2143 130 12 6 chr5 46168029 46168375 -153461775 + L1PA14 LINE L1 5810 6157 -4 21 0 0 0 chr5 46169108 46169129 -153461021 + AT_rich Low_complexity Low_complexity 1 21 0 3074 179 89 32 chr5 46169290 46169434 -153460716 + L1MB1 LINE L1 4464 4598 -1570 2162 128 0 0 chr5 46169434 46169730 -153460420 + AluSg SINE Alu 1 296 -14 3074 179 89 32 chr5 46169730 46170970 -153459180 + L1MB1 LINE L1 4598 5933 -235 379 286 62 29 chr5 46171006 46171247 -153458903 - L1ME4a LINE L1 -155 5966 5718 471 233 27 48 chr5 46171285 46171431 -153458719 - MIR SINE MIR -7 255 113 241 288 0 15 chr5 46171747 46171813 -153458337 + MIR SINE MIR 194 258 -4 342 338 34 14 chr5 46171872 46172020 -153458130 - L1ME4a LINE L1 -1101 5045 4895 2632 164 72 8 chr5 46172095 46172582 -153457568 + MER44D DNA MER2_type 2 574 -31 420 20 0 0 chr5 46172593 46172642 -153457508 + (TG)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr5 46172737 46172765 -153457385 + AT_rich Low_complexity Low_complexity 1 28 0 1312 137 13 4 chr5 46172765 46172992 -153457158 - L1MA5A LINE L1 -5 6292 6064 30 59 0 0 chr5 46173897 46173948 -153456202 + AT_rich Low_complexity Low_complexity 1 51 0 11619 177 44 15 chr5 46174322 46176445 -153453705 - L1MA3 LINE L1 0 6305 4025 902 15 23 30 chr5 46176445 46176578 -153453572 + (TTTC)n Simple_repeat Simple_repeat 2 133 0 11619 177 44 15 chr5 46176578 46178064 -153452086 - L1MA3 LINE L1 -2280 4025 2584 819 322 202 28 chr5 46178065 46178858 -153451292 - L2 LINE L2 -495 2819 1889 183 42 0 0 chr5 46179187 46179211 -153450939 + (TG)n Simple_repeat Simple_repeat 2 25 0 235 272 194 19 chr5 46179234 46179337 -153450813 - MER5B DNA MER1_type -6 172 52 2737 257 71 42 chr5 46180110 46180987 -153449163 + L1MB8 LINE L1 12 913 -5946 1865 177 36 8 chr5 46181012 46181374 -153448776 - MLT1B LTR MaLR -18 372 1 544 244 29 101 chr5 46181890 46182128 -153448022 + L1MB8 LINE L1 1205 1425 -5434 * 3129 249 94 17 chr5 46182121 46183424 -153446726 + L1MB8 LINE L1 3326 4728 -2229 1189 129 5 10 chr5 46183427 46183628 -153446522 - MER6 DNA MER2_type 0 865 666 4068 237 16 27 chr5 46183628 46184599 -153445551 + L1PA12 LINE L1 1 961 -6620 * 5384 148 30 29 chr5 46184598 46185600 -153444550 + L1P LINE L1 3319 4321 -1825 42161 38 22 1 chr5 46185606 46191620 -153438530 + L1PA3 LINE L1 13 6154 -1 1266 166 0 36 chr5 46191622 46191875 -153438275 + L1P LINE L1 4303 4546 -1600 * 4028 204 21 13 chr5 46191874 46192954 -153437196 + L1MB8 LINE L1 5897 6986 -3 186 279 103 29 chr5 46194978 46195046 -153435104 - MIR SINE MIR -110 98 26 307 264 40 56 chr5 46195992 46196117 -153434033 + MIR SINE MIR 74 196 -66 22 35 0 0 chr5 46196123 46196152 -153433998 + AT_rich Low_complexity Low_complexity 1 29 0 1813 120 3 14 chr5 46196157 46196440 -153433710 + AluSx SINE Alu 33 312 0 302 275 85 47 chr5 46196442 46196700 -153433450 + L1MC5 LINE L1 7650 7917 -44 1992 116 10 7 chr5 46196714 46196844 -153433306 + AluSg SINE Alu 1 129 -181 249 57 0 0 chr5 46196844 46196879 -153433271 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1992 116 10 7 chr5 46196879 46197040 -153433110 + AluSg SINE Alu 129 293 -17 264 114 0 0 chr5 46197433 46197468 -153432682 + MER92B LTR ERV1 1 35 -601 1412 146 0 24 chr5 46198759 46198972 -153431178 - AluJo SINE Alu -104 208 1 286 226 0 0 chr5 46199379 46199441 -153430709 + MER92C LTR ERV1 491 552 -2 431 238 173 28 chr5 46201348 46201562 -153428588 - MIR SINE MIR 0 262 18 1963 193 3 11 chr5 46202290 46202658 -153427492 - MLT1A1 LTR MaLR 0 365 1 221 311 40 27 chr5 46202835 46202909 -153427241 + L2 LINE L2 3198 3272 0 13616 193 30 18 chr5 46203130 46205902 -153424248 - L1M1 LINE L1 -486 6050 3255 1886 156 0 47 chr5 46205902 46206223 -153423927 - AluSx SINE Alu -6 306 1 13616 193 30 18 chr5 46206223 46207298 -153422852 - L1M1 LINE L1 -3281 3255 2195 10717 241 58 30 chr5 46207299 46207905 -153422245 - L1P4 LINE L1 -531 7054 6467 4061 98 6 44 chr5 46207905 46208535 -153421615 + LTR14B LTR ERVK 3 608 0 10717 241 58 30 chr5 46208535 46208980 -153421170 - L1P4 LINE L1 -1118 6467 6036 2409 136 8 0 chr5 46208980 46209348 -153420802 + THE1C LTR MaLR 1 371 -4 9327 119 40 45 chr5 46209352 46210941 -153419209 + THE1C-int LTR MaLR 1 1580 0 1860 137 99 9 chr5 46210941 46211285 -153418865 + THE1C LTR MaLR 1 375 0 10717 241 58 30 chr5 46211285 46213358 -153416792 - L1P4 LINE L1 -1551 6034 4021 2158 120 0 13 chr5 46213358 46213659 -153416491 - AluSg SINE Alu -13 297 1 10717 241 58 30 chr5 46213659 46215133 -153415017 - L1P4 LINE L1 -3564 4021 1898 580 296 80 72 chr5 46215613 46216015 -153414135 - L1M1 LINE L1 -5537 766 362 543 298 152 21 chr5 46216053 46216435 -153413715 - L1MEd LINE L1 -5666 453 22 38 85 0 0 chr5 46216575 46216669 -153413481 + AT_rich Low_complexity Low_complexity 1 94 0 206 363 55 0 chr5 46216723 46216814 -153413336 + L2 LINE L2 3175 3270 -2 4115 204 31 45 chr5 46217093 46217260 -153412890 + MST-int LTR MaLR 45 213 -1438 3229 102 29 20 chr5 46217260 46217748 -153412402 + LTR22B LTR ERVK 1 492 0 4115 204 31 45 chr5 46217748 46218539 -153411611 + MST-int LTR MaLR 213 990 -661 304 211 0 0 chr5 46218546 46218603 -153411547 + MSTB1 LTR MaLR 327 383 -49 330 336 111 61 chr5 46218885 46219227 -153410923 + L2 LINE L2 2912 3270 -2 7929 111 11 19 chr5 46219272 46222230 -153407920 + HERV9 LTR ERV1 1 2468 0 * 15861 76 4 8 chr5 46222230 46224425 -153405725 + HERV9 LTR ERV1 2758 4944 -3455 783 162 46 46 chr5 46224426 46224728 -153405422 + HERV9 LTR ERV1 840 1141 -5755 278 226 0 0 chr5 46224726 46224788 -153405362 + HERV9 LTR ERV1 7503 7564 -835 * 4266 93 2 2 chr5 46224784 46225394 -153404756 + HERV9 LTR ERV1 7789 8398 -1 2811 82 181 145 chr5 46225395 46226062 -153404088 + LTR12 LTR ERV1 1 691 -23 26 74 0 0 chr5 46227344 46227398 -153402752 + AT_rich Low_complexity Low_complexity 1 54 0 22 0 0 0 chr5 46229441 46229463 -153400687 + AT_rich Low_complexity Low_complexity 1 22 0 624 213 51 41 chr5 46229691 46229888 -153400262 - LTR16A1 LTR ERVL -11 446 248 1244 329 87 30 chr5 46230520 46231780 -153398370 - HERVL LTR ERVL -699 4955 3624 399 296 52 34 chr5 46231829 46232062 -153398088 - HERVL LTR ERVL -2430 2566 2330 1360 144 34 58 chr5 46232076 46232572 -153397578 - MSTA LTR MaLR 0 428 1 346 342 0 0 chr5 46232572 46232689 -153397461 - HERVL LTR ERVL -3513 2251 2135 1752 132 149 14 chr5 46232716 46233080 -153397070 - MSTA LTR MaLR -15 413 1 250 356 30 0 chr5 46233107 46233239 -153396911 - HERVL LTR ERVL -2996 2000 1865 720 336 54 44 chr5 46233268 46233950 -153396200 - HERVL LTR ERVL -4207 789 101 2314 92 10 79 chr5 46233999 46234390 -153395760 + THE1B LTR MaLR 1 364 0 1365 263 38 8 chr5 46234462 46234858 -153395292 - LTR16A1 LTR ERVL -6 451 44 310 291 31 13 chr5 46235029 46235203 -153394947 + MLT1I LTR MaLR 244 409 0 372 312 64 9 chr5 46235243 46235352 -153394798 - MIR SINE MIR -57 151 37 451 317 32 0 chr5 46235451 46235574 -153394576 - L2 LINE L2 0 3313 3187 238 381 24 0 chr5 46236143 46236227 -153393923 - L2 LINE L2 -53 3219 3134 260 219 14 14 chr5 46236364 46236437 -153393713 + HsTC2 DNA Tc2 13 85 -1813 274 153 83 28 chr5 46236542 46236614 -153393536 + HsTC2 DNA Tc2 1808 1883 -15 405 0 0 0 chr5 46237233 46237278 -153392872 + (TG)n Simple_repeat Simple_repeat 2 46 0 226 158 79 13 chr5 46238223 46238299 -153391851 - Charlie5 DNA MER1_type -119 2493 2413 22 0 0 0 chr5 46238300 46238322 -153391828 + AT_rich Low_complexity Low_complexity 1 22 0 1521 207 42 8 chr5 46238385 46238623 -153391527 + L1M3 LINE L1 4989 5217 -951 2099 106 0 3 chr5 46238623 46238906 -153391244 + AluSg SINE Alu 29 310 0 1521 207 42 8 chr5 46238906 46239274 -153390876 + L1M3 LINE L1 5217 5606 -562 641 220 58 95 chr5 46239291 46239586 -153390564 + L1M1 LINE L1 681 964 -6245 1452 200 129 0 chr5 46239587 46239952 -153390198 - MSTB1 LTR MaLR -20 412 1 9185 206 31 17 chr5 46239975 46241572 -153388578 + L1M1 LINE L1 1189 2831 -4377 288 0 0 0 chr5 46241572 46241604 -153388546 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 9185 206 31 17 chr5 46241604 46242629 -153387521 + L1M1 LINE L1 2831 3841 -3367 356 83 0 0 chr5 46242631 46242679 -153387471 - L1PA16 LINE L1 -221 5945 5898 1258 111 10 30 chr5 46242679 46242876 -153387274 + L1PA16 LINE L1 5973 6166 0 11228 181 22 17 chr5 46243127 46244567 -153385583 + L1M1 LINE L1 3823 5290 -2075 2413 74 0 0 chr5 46244567 46244864 -153385286 - AluY SINE Alu -13 298 2 11228 181 22 17 chr5 46244864 46246227 -153383923 + L1M1 LINE L1 5290 6645 -720 1351 153 52 64 chr5 46246254 46246580 -153383570 - LTR1 LTR ERV1 -463 322 1 2408 68 10 0 chr5 46248314 46248622 -153381528 + AluY SINE Alu 1 311 0 1937 118 7 7 chr5 46248925 46249220 -153380930 + AluSp SINE Alu 27 313 0 25 0 0 0 chr5 46249564 46249589 -153380561 + AT_rich Low_complexity Low_complexity 1 25 0 2426 55 0 3 chr5 46250030 46250320 -153379830 + AluY SINE Alu 6 294 -17 4520 208 36 7 chr5 46250743 46252019 -153378131 + L1MC2 LINE L1 5023 6331 -13 25 0 0 0 chr5 46252019 46252044 -153378106 + AT_rich Low_complexity Low_complexity 1 25 0 372 328 23 8 chr5 46252121 46252252 -153377898 + MIR3 SINE MIR 12 144 -64 1953 126 3 14 chr5 46252366 46252684 -153377466 - AluSx SINE Alu 0 315 1 29 0 0 0 chr5 46253456 46253485 -153376665 + AT_rich Low_complexity Low_complexity 1 29 0 1406 218 100 52 chr5 46253527 46254009 -153376141 - MLT1D LTR MaLR 0 505 1 241 241 52 78 chr5 46255144 46255295 -153374855 - MER5A DNA MER1_type -10 179 26 1984 142 7 10 chr5 46255898 46256208 -153373942 + AluSg SINE Alu 1 309 -1 1778 160 144 8 chr5 46256355 46256730 -153373420 + MSTA LTR MaLR 3 428 0 8791 149 11 35 chr5 46256732 46258343 -153371807 + MSTA-int LTR MaLR 3 1574 -6 1723 151 133 18 chr5 46258353 46258669 -153371481 + MSTA LTR MaLR 1 370 -58 6208 89 0 0 chr5 46258669 46259744 -153370406 - L1PA10 LINE L1 0 6168 5094 1723 151 133 18 chr5 46259744 46259811 -153370339 + MSTA LTR MaLR 370 428 0 195 280 20 0 chr5 46259951 46260001 -153370149 - MER5A DNA MER1_type -135 54 4 24 0 0 0 chr5 46260073 46260097 -153370053 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr5 46261895 46261932 -153368218 + AT_rich Low_complexity Low_complexity 1 37 0 293 278 41 0 chr5 46261965 46262062 -153368088 + L1ME LINE L1 5650 5750 -371 35 0 0 0 chr5 46262198 46262233 -153367917 + AT_rich Low_complexity Low_complexity 1 35 0 1753 150 27 40 chr5 46262370 46262670 -153367480 + AluJb SINE Alu 1 296 -16 1038 179 80 19 chr5 46262670 46262983 -153367167 - L1M4 LINE L1 -841 5305 4974 565 229 0 47 chr5 46262981 46263173 -153366977 - L1MC4 LINE L1 -410 7632 7450 * 553 266 115 49 chr5 46263200 46263505 -153366645 - L1MC4a LINE L1 -1208 6600 6276 196 100 140 20 chr5 46263541 46263641 -153366509 + (TTTAA)n Simple_repeat Simple_repeat 5 116 0 1401 247 32 66 chr5 46263790 46264348 -153365802 - L1MC4a LINE L1 -1756 6052 5514 2006 137 0 0 chr5 46264430 46264739 -153365411 - AluSx SINE Alu 0 313 5 479 296 84 64 chr5 46267236 46267689 -153362461 + L2 LINE L2 2326 2787 -527 351 382 85 20 chr5 46267830 46268029 -153362121 + L2 LINE L2 2989 3200 -72 1630 247 87 54 chr5 46268129 46268201 -153361949 - L1ME2 LINE L1 -13 6220 6152 1634 174 7 7 chr5 46268201 46268483 -153361667 + AluJo SINE Alu 1 282 -30 1630 247 87 54 chr5 46268483 46268499 -153361651 - L1ME2 LINE L1 -81 6152 6138 472 88 12 12 chr5 46268499 46268579 -153361571 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 1630 247 87 54 chr5 46268579 46269096 -153361054 - L1ME2 LINE L1 -95 6138 5640 270 0 0 0 chr5 46269096 46269126 -153361024 + (ATG)n Simple_repeat Simple_repeat 2 31 0 2191 95 0 11 chr5 46269131 46269416 -153360734 - AluSc SINE Alu -27 282 1 1630 247 87 54 chr5 46269416 46269840 -153360310 - L1ME2 LINE L1 -596 5637 5228 2136 110 0 31 chr5 46269840 46270157 -153359993 - AluSq SINE Alu -6 307 1 1630 247 87 54 chr5 46270157 46270670 -153359480 - L1ME2 LINE L1 -1005 5228 4508 1837 156 3 6 chr5 46270675 46270995 -153359155 - L1MA4A LINE L1 -5 6298 5980 2753 177 74 30 chr5 46271021 46273352 -153356798 - L1MA4A LINE L1 -467 5836 3247 398 342 38 6 chr5 46273353 46273511 -153356639 + MLT2F LTR ERVL 288 450 -213 1354 262 68 12 chr5 46273511 46273999 -153356151 - L1ME2 LINE L1 -3168 3047 2533 225 94 0 0 chr5 46273999 46274031 -153356119 + (T)n Simple_repeat Simple_repeat 1 32 0 6451 14 1 0 chr5 46274031 46274769 -153355381 - L1HS LINE L1 0 6155 5417 8735 17 0 0 chr5 46274770 46275833 -153354317 + L1P1 LINE L1 4370 5432 -723 1065 247 48 8 chr5 46275826 46276356 -153353794 - L1ME2 LINE L1 -3670 2545 1996 * 207 349 12 12 chr5 46277187 46277273 -153352877 + L2 LINE L2 3220 3305 -8 730 307 99 19 chr5 46278370 46278732 -153351418 + L2 LINE L2 2923 3313 0 198 301 43 32 chr5 46279837 46279930 -153350220 + MIR3 SINE MIR 106 199 -9 25 31 0 0 chr5 46280167 46280199 -153349951 + AT_rich Low_complexity Low_complexity 1 32 0 7465 33 0 1 chr5 46280263 46281163 -153348987 - L1PA4 LINE L1 -3 6152 5254 1813 36 0 0 chr5 46281168 46281393 -153348757 + L1P LINE L1 4996 5220 -926 221 167 19 0 chr5 46281887 46281941 -153348209 + (TTAA)n Simple_repeat Simple_repeat 2 56 0 315 300 133 0 chr5 46283039 46283159 -153346991 + MIR3 SINE MIR 15 150 -58 1092 166 6 6 chr5 46283233 46283414 -153346736 - MSTC LTR MaLR -2 426 246 1742 144 45 51 chr5 46284257 46284303 -153345847 - THE1C LTR MaLR 0 375 330 1864 130 7 24 chr5 46284303 46284595 -153345555 + AluSx SINE Alu 7 293 -19 1742 144 45 51 chr5 46284595 46284922 -153345228 - THE1C LTR MaLR -45 330 4 8974 123 84 8 chr5 46284925 46286394 -153343756 - THE1C-int LTR MaLR 0 1580 1 2347 131 11 8 chr5 46286394 46286768 -153343382 - THE1C LTR MaLR 0 375 1 2324 87 3 0 chr5 46287355 46287665 -153342485 - AluY SINE Alu 0 311 1 3437 73 7 0 chr5 46288086 46288539 -153341611 + L1PA8 LINE L1 5708 6163 -9 5322 156 38 26 chr5 46288671 46288744 -153341406 + L1MC2 LINE L1 5289 5360 -984 594 76 0 0 chr5 46288744 46288823 -153341327 + MADE1 DNA Mariner 2 80 0 5322 156 38 26 chr5 46288823 46289791 -153340359 + L1MC2 LINE L1 5360 6343 -1 22 0 0 0 chr5 46290117 46290139 -153340011 + AT_rich Low_complexity Low_complexity 1 22 0 342 314 99 52 chr5 46290249 46290612 -153339538 - L1M4 LINE L1 -3006 3140 2761 2186 159 12 56 chr5 46290656 46291070 -153339080 + L1M1 LINE L1 10 405 -7160 206 340 0 0 chr5 46291236 46291339 -153338811 + T-rich Low_complexity Low_complexity 1 103 0 567 309 124 0 chr5 46292087 46292304 -153337846 - MIR SINE MIR -12 250 7 502 320 11 56 chr5 46292885 46293063 -153337087 - MIR3 SINE MIR -7 201 32 653 294 65 17 chr5 46293970 46294201 -153335949 + MIR SINE MIR 8 249 -13 833 281 53 4 chr5 46294888 46295116 -153335034 + MIR SINE MIR 3 241 -21 1612 243 49 20 chr5 46296242 46296691 -153333459 + MLT1C LTR MaLR 6 467 0 286 136 11 171 chr5 46297134 46297172 -153332978 + MIR SINE MIR 164 182 -80 2007 136 7 0 chr5 46297172 46297466 -153332684 + AluSx SINE Alu 1 296 -16 286 136 11 171 chr5 46297466 46297515 -153332635 + MIR SINE MIR 182 237 -25 1642 188 0 0 chr5 46298809 46299122 -153331028 + AluJb SINE Alu 1 313 0 537 230 0 18 chr5 46299675 46299788 -153330362 + LTR33 LTR ERVL 402 512 -9 1825 156 146 13 chr5 46300190 46300568 -153329582 - MSTA LTR MaLR 0 428 1 525 345 36 16 chr5 46300942 46301194 -153328956 - MIR SINE MIR -1 261 5 29 28 0 0 chr5 46301456 46301492 -153328658 + AT_rich Low_complexity Low_complexity 1 36 0 1606 135 17 10 chr5 46302177 46302473 -153327677 + AluY SINE Alu 1 298 -13 419 262 33 43 chr5 46302854 46303042 -153327108 - MIR SINE MIR 0 262 78 2163 142 94 8 chr5 46305229 46305623 -153324527 + MSTA LTR MaLR 1 428 0 23 33 0 0 chr5 46306029 46306059 -153324091 + AT_rich Low_complexity Low_complexity 1 30 0 301 336 84 8 chr5 46306306 46306437 -153323713 + MIR3 SINE MIR 41 181 -27 1395 203 65 4 chr5 46306437 46306713 -153323437 - AluJo SINE Alu -9 293 1 562 231 145 32 chr5 46306881 46307102 -153323048 + L1ME3A LINE L1 5711 5956 -214 401 239 8 0 chr5 46307158 46307275 -153322875 + (TA)n Simple_repeat Simple_repeat 2 119 0 203 432 20 7 chr5 46308635 46308783 -153321367 + MIR3 SINE MIR 40 189 -19 21 36 0 0 chr5 46308808 46308836 -153321314 + AT_rich Low_complexity Low_complexity 1 28 0 355 325 85 48 chr5 46308980 46309334 -153320816 - MLT1J2 LTR MaLR -2 448 82 22 0 0 0 chr5 46309919 46309941 -153320209 + AT_rich Low_complexity Low_complexity 1 22 0 789 231 35 15 chr5 46309981 46310016 -153320134 - MLT2B3 LTR ERVL 0 554 521 473 71 14 0 chr5 46310016 46310086 -153320064 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 789 231 35 15 chr5 46310086 46310249 -153319901 - MLT2B3 LTR ERVL -33 521 352 216 0 0 0 chr5 46310859 46310883 -153319267 + (TTC)n Simple_repeat Simple_repeat 1 24 0 342 0 0 0 chr5 46310883 46310921 -153319229 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1853 86 4 0 chr5 46310922 46311177 -153318973 - L1PA6 LINE L1 -17 6137 5882 1466 224 70 6 chr5 46311478 46311821 -153318329 + MLT1A1 LTR MaLR 1 365 0 448 348 114 45 chr5 46312233 46312923 -153317227 + L1MEc LINE L1 45 782 -5614 892 244 103 55 chr5 46312941 46313487 -153316663 + L1MEc LINE L1 1914 2485 -3911 3830 260 88 38 chr5 46313491 46315388 -153314762 + L1MEc LINE L1 2547 4538 -1677 207 0 0 0 chr5 46315393 46315416 -153314734 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 6749 136 18 13 chr5 46315431 46317028 -153313122 - L1MA1 LINE L1 0 7721 6116 5424 34 3 11 chr5 46317050 46317707 -153312443 - L1PA4 LINE L1 -49 6106 5455 * 5718 32 1 0 chr5 46317701 46318397 -153311753 + L1P LINE L1 4707 5403 -743 8698 171 18 9 chr5 46318420 46319728 -153310422 - L1MA1 LINE L1 -1447 6118 4823 1863 101 45 0 chr5 46319728 46320014 -153310136 - L1PA13 LINE L1 -5 6158 5860 8698 171 18 9 chr5 46320014 46322436 -153307714 - L1MA1 LINE L1 -2742 4823 2348 319 264 40 56 chr5 46325577 46325702 -153304448 + MIR SINE MIR 74 196 -66 22 35 0 0 chr5 46325708 46325737 -153304413 + AT_rich Low_complexity Low_complexity 1 29 0 1783 120 3 14 chr5 46325742 46326025 -153304125 + AluSx SINE Alu 33 312 0 325 275 85 47 chr5 46326027 46326285 -153303865 + L1MC5 LINE L1 7650 7917 -44 910 92 0 15 chr5 46326299 46326430 -153303720 + AluSg SINE Alu 1 129 -181 1393 146 0 24 chr5 46327499 46327712 -153302438 - AluJo SINE Alu -104 208 1 289 226 0 0 chr5 46328118 46328180 -153301970 + MER92C LTR ERV1 491 552 -2 322 211 187 16 chr5 46330087 46330210 -153299940 - MIR SINE MIR 0 262 119 37 23 0 0 chr5 46430737 46430781 -153199369 + AT_rich Low_complexity Low_complexity 1 44 0 2189 93 21 0 chr5 46431802 46432093 -153198057 - AluSx SINE Alu -15 297 1 475 257 18 9 chr5 46432148 46432261 -153197889 - MER81 DNA DNA 0 114 1 27 29 0 0 chr5 46432638 46432672 -153197478 + AT_rich Low_complexity Low_complexity 1 34 0 306 301 96 19 chr5 46433623 46433779 -153196371 + Charlie8 DNA MER1_type 96 263 -2154 312 317 103 78 chr5 46434083 46434259 -153195891 + MIR SINE MIR 4 192 -70 1011 219 33 5 chr5 46434259 46434474 -153195676 - MER58A DNA MER1_type 0 224 4 312 317 103 78 chr5 46434474 46434547 -153195603 + MIR SINE MIR 192 262 0 1261 167 65 58 chr5 46434909 46435202 -153194948 + AluJo SINE Alu 1 295 -17 21 57 0 0 chr5 46436130 46436165 -153193985 + AT_rich Low_complexity Low_complexity 1 35 0 2180 99 0 10 chr5 46438803 46439105 -153191045 - AluSc SINE Alu -10 299 1 238 364 45 40 chr5 46441459 46441657 -153188493 + L2 LINE L2 2890 3088 -184 416 226 113 15 chr5 46441771 46441904 -153188246 - MER103 DNA DNA 0 166 21 355 317 49 38 chr5 46442787 46442970 -153187180 - MIR SINE MIR -50 212 28 576 239 101 32 chr5 46443193 46443381 -153186769 + MER63A DNA MER1_type 10 210 0 1117 232 24 4 chr5 46443445 46443695 -153186455 - MIR SINE MIR -5 257 3 190 310 161 0 chr5 46444622 46444709 -153185441 - L2 LINE L2 -16 3297 3197 1690 330 59 31 chr5 46444930 46445725 -153184425 - ERVL LTR ERVL -2046 3718 2902 250 175 70 0 chr5 46445934 46445991 -153184159 - MLT1K LTR MaLR -16 572 512 354 45 0 0 chr5 46446129 46446173 -153183977 + (TC)n Simple_repeat Simple_repeat 1 44 0 2396 86 0 0 chr5 46447726 46448027 -153182123 + AluY SINE Alu 1 301 -10 407 348 63 46 chr5 46448753 46449339 -153180811 - L1M4 LINE L1 -2872 3274 2679 1488 169 75 0 chr5 46449343 46449610 -153180540 + AluJb SINE Alu 3 289 -23 22 35 0 0 chr5 46451201 46451230 -153178920 + AT_rich Low_complexity Low_complexity 1 29 0 909 247 46 5 chr5 46451451 46451670 -153178480 - LTR16A LTR ERVL -24 426 199 237 316 13 13 chr5 46451699 46451778 -153178372 + L1MC/D LINE L1 5556 5634 -2174 991 170 77 142 chr5 46451818 46452235 -153177915 + MLT1B LTR MaLR 1 390 0 403 279 183 46 chr5 46452382 46452579 -153177571 - MIR SINE MIR 0 262 39 42731 31 23 3 chr5 46452584 46458615 -153171535 + L1PA2 LINE L1 1 6152 -3 30 0 0 0 chr5 46458615 46458645 -153171505 + AT_rich Low_complexity Low_complexity 1 30 0 211 189 0 0 chr5 46458709 46458746 -153171404 + GA-rich Low_complexity Low_complexity 2 38 0 1329 163 10 120 chr5 46458825 46459147 -153171003 + MLT2B3 LTR ERVL 1 292 -223 429 366 100 32 chr5 46459153 46459533 -153170617 + L2 LINE L2 2867 3272 0 1513 304 41 4 chr5 46459560 46460073 -153170077 + MLT1H1 LTR MaLR 24 555 0 5568 38 7 1 chr5 46460852 46462007 -153168143 + L1PA5 LINE L1 4706 5867 -287 2295 66 7 0 chr5 46462107 46462410 -153167740 + L1PA5 LINE L1 5847 6151 -3 27 0 0 0 chr5 46462410 46462437 -153167713 + AT_rich Low_complexity Low_complexity 1 27 0 686 193 88 58 chr5 46463736 46463788 -153166362 + MER45A DNA AcHobo 1 50 -1531 1749 173 33 44 chr5 46463788 46464153 -153165997 - MLT1A1 LTR MaLR 0 365 5 686 193 88 58 chr5 46464153 46464271 -153165879 + MER45A DNA AcHobo 50 176 -2 24 67 0 0 chr5 46464753 46464798 -153165352 + AT_rich Low_complexity Low_complexity 1 45 0 264 100 0 0 chr5 46466625 46466665 -153163485 + (CA)n Simple_repeat Simple_repeat 2 41 0 3328 62 14 2 chr5 46467624 46468058 -153162092 - L1PA7 LINE L1 -1 6153 5715 1452 282 56 41 chr5 46468369 46468554 -153161596 + MLT1H LTR MaLR 3 184 -365 3517 141 15 0 chr5 46468554 46469073 -153161077 + MER1A DNA MER1_type 1 527 0 1452 282 56 41 chr5 46469073 46469426 -153160724 + MLT1H LTR MaLR 184 549 0 404 277 20 0 chr5 46469536 46469637 -153160513 - MIR SINE MIR -113 149 47 2075 120 0 27 chr5 46470464 46470765 -153159385 - AluSx SINE Alu -19 293 1 390 308 127 11 chr5 46470849 46471125 -153159025 + L2 LINE L2 3006 3313 0 516 263 163 0 chr5 46471198 46471358 -153158792 - MER5A DNA MER1_type 0 189 4 22 0 0 0 chr5 46472439 46472461 -153157689 + AT_rich Low_complexity Low_complexity 1 22 0 640 181 9 0 chr5 46472490 46472606 -153157544 - L1PA16 LINE L1 -4 6162 6046 329 266 64 11 chr5 46472921 46473015 -153157135 + L1MC4 LINE L1 6616 6714 -1328 270 0 0 0 chr5 46473208 46473238 -153156912 + (CATA)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr5 46473248 46473268 -153156882 + (TG)n Simple_repeat Simple_repeat 2 21 0 180 0 0 0 chr5 46473267 46473287 -153156863 + (TA)n Simple_repeat Simple_repeat 1 20 0 647 258 68 60 chr5 46473883 46473988 -153156162 - MIR SINE MIR -2 260 157 2142 87 7 7 chr5 46473988 46474287 -153155863 - AluSx SINE Alu -12 300 2 647 258 68 60 chr5 46474287 46474433 -153155717 - MIR SINE MIR -105 157 7 2209 180 86 36 chr5 46477449 46477971 -153152179 + MER44D DNA MER2_type 2 604 -1 2467 59 0 0 chr5 46477995 46478298 -153151852 + AluY SINE Alu 1 303 -8 207 102 20 82 chr5 46478615 46478664 -153151486 + (TTTTC)n Simple_repeat Simple_repeat 1 46 0 676 225 28 60 chr5 46478899 46479148 -153151002 + L1MC5 LINE L1 7644 7884 -77 452 234 34 63 chr5 46479226 46479303 -153150847 + L1MC3 LINE L1 5750 5828 -1980 2065 126 3 3 chr5 46479303 46479605 -153150545 + AluSx SINE Alu 1 302 -10 452 234 34 63 chr5 46479605 46479702 -153150448 + L1MC3 LINE L1 5828 5919 -1889 1938 133 38 22 chr5 46479906 46480282 -153149868 - Tigger3(Golem) DNA MER2_type -1 3028 1 262 302 32 79 chr5 46480637 46480763 -153149387 - MIR SINE MIR -64 198 79 3724 178 72 41 chr5 46480912 46481745 -153148405 + L1MC3 LINE L1 6637 7495 -290 980 109 97 11 chr5 46481917 46482092 -153148058 - L1MC2 LINE L1 -6 6338 6149 1512 96 0 0 chr5 46482098 46482296 -153147854 + AluSg SINE Alu 3 200 -110 10495 127 10 3 chr5 46482302 46485028 -153145122 + L1MA1 LINE L1 3553 6299 -3 207 308 13 13 chr5 46485297 46485375 -153144775 - MIR SINE MIR -37 225 148 189 0 0 0 chr5 46485527 46485548 -153144602 + (CAA)n Simple_repeat Simple_repeat 1 21 0 227 374 10 0 chr5 46485808 46485907 -153144243 + L2 LINE L2 3166 3265 -7 370 317 17 8 chr5 46486273 46486393 -153143757 - L2 LINE L2 -6 3307 3187 1736 112 8 4 chr5 46487032 46487281 -153142869 + AluSx SINE Alu 47 296 -16 23 68 0 0 chr5 46487325 46487369 -153142781 + AT_rich Low_complexity Low_complexity 1 44 0 962 169 0 7 chr5 46487369 46487523 -153142627 - FRAM SINE Alu -24 152 1 26 0 0 0 chr5 46487523 46487549 -153142601 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr5 46487584 46487613 -153142537 + AT_rich Low_complexity Low_complexity 1 29 0 202 314 0 0 chr5 46488226 46488277 -153141873 + L3 LINE CR1 1503 1553 -24 2988 182 81 22 chr5 46488483 46489174 -153140976 - L1 LINE L1 -1321 4825 4094 4638 203 28 40 chr5 46489177 46490411 -153139739 + L1 LINE L1 2869 4087 -2059 1625 87 0 18 chr5 46490469 46490688 -153139462 + AluSc SINE Alu 85 299 -10 1273 267 79 35 chr5 46491303 46491820 -153138330 + Charlie7 DNA MER1_type 35 574 -2038 411 249 168 0 chr5 46491821 46491994 -153138156 + Charlie7 DNA MER1_type 1769 1970 -642 3843 185 64 28 chr5 46492003 46495283 -153134867 + L1MCa LINE L1 29 3616 -2810 1567 116 4 0 chr5 46495283 46495515 -153134635 + AluSq SINE Alu 81 313 0 3843 185 64 28 chr5 46495515 46495617 -153134533 + L1MCa LINE L1 3616 3713 -2713 190 265 143 20 chr5 46495945 46496043 -153134107 + L2 LINE L2 2615 2724 -590 470 371 78 47 chr5 46496579 46497396 -153132754 + L2 LINE L2 2428 3272 0 357 24 0 0 chr5 46499574 46499616 -153130534 + (CA)n Simple_repeat Simple_repeat 1 42 0 1590 119 16 129 chr5 46500506 46500892 -153129258 + L1MA8 LINE L1 5945 6286 -5 2356 58 0 14 chr5 46500898 46501193 -153128957 - AluY SINE Alu -20 291 1 33 56 0 0 chr5 46501193 46501247 -153128903 + AT_rich Low_complexity Low_complexity 1 54 0 35 0 0 0 chr5 46501456 46501491 -153128659 + AT_rich Low_complexity Low_complexity 1 35 0 10585 215 19 31 chr5 46501623 46504299 -153125851 - L1PA16 LINE L1 -16 6853 4236 189 0 0 0 chr5 46504299 46504320 -153125830 + (TTG)n Simple_repeat Simple_repeat 1 21 0 10585 215 19 31 chr5 46504320 46505270 -153124880 - L1PA16 LINE L1 -2633 4236 3276 1159 194 7 21 chr5 46505240 46505529 -153124621 - L1PA16 LINE L1 -4709 2140 1856 * 1999 219 45 40 chr5 46505523 46506352 -153123798 - L1PA15-16 LINE L1 -3583 2563 1772 774 201 6 52 chr5 46506343 46506517 -153123633 + L1PA15-16 LINE L1 2377 2542 -4307 * 560 151 0 0 chr5 46506517 46506603 -153123547 - AluS SINE Alu -225 88 3 846 227 98 4 chr5 46506608 46506885 -153123265 - L1M4 LINE L1 -776 5370 5068 353 426 52 28 chr5 46506941 46507441 -153122709 - L1M2 LINE L1 -6318 531 20 659 157 0 0 chr5 46507441 46507543 -153122607 - AluS SINE Alu -211 102 1 32 43 0 0 chr5 46507667 46507713 -153122437 + AT_rich Low_complexity Low_complexity 1 46 0 1285 238 66 3 chr5 46507852 46508231 -153121919 + L1ME1 LINE L1 4968 5370 -776 603 90 0 11 chr5 46508234 46508323 -153121827 + AluS SINE Alu 1 88 -225 940 196 91 9 chr5 46508325 46508545 -153121605 + L1ME1 LINE L1 5357 5594 -572 842 281 63 28 chr5 46508550 46508835 -153121315 - LTR16B LTR ERVL 0 464 170 319 224 0 0 chr5 46508982 46509040 -153121110 - LTR16B LTR ERVL -406 58 1 495 324 0 7 chr5 46509154 46509299 -153120851 - HERV16 LTR ERVL -3188 1808 1665 3384 325 54 23 chr5 46509335 46510783 -153119367 - HERV16 LTR ERVL -3462 1534 42 253 229 0 0 chr5 46510797 46510845 -153119305 - LTR16B LTR ERVL 0 464 417 561 301 62 0 chr5 46510845 46511021 -153119129 - LTR16B LTR ERVL -277 187 1 2263 222 55 6 chr5 46511027 46511553 -153118597 + L1ME1 LINE L1 5610 6161 -5 254 237 0 13 chr5 46511622 46511698 -153118452 + L1MCc LINE L1 1394 1468 -4955 2115 130 0 0 chr5 46511715 46512016 -153118134 - AluSx SINE Alu -11 301 1 334 292 25 51 chr5 46512037 46512235 -153117915 + L1MCc LINE L1 1683 1890 -5041 615 353 119 10 chr5 46512245 46512647 -153117503 - MLT2F LTR ERVL -89 574 129 687 293 51 5 chr5 46512648 46512863 -153117287 - MLT2F LTR ERVL -436 227 3 1375 279 78 26 chr5 46512874 46513785 -153116365 + L1MCc LINE L1 2678 3586 -3355 4685 20 0 2 chr5 46513815 46514359 -153115791 + L1PA3 LINE L1 5610 6152 -3 191 344 16 0 chr5 46514712 46514773 -153115377 - L2 LINE L2 -2 3311 3250 25 75 0 0 chr5 46514880 46514933 -153115217 + AT_rich Low_complexity Low_complexity 1 53 0 296 204 35 97 chr5 46515352 46515465 -153114685 + MLT2F LTR ERVL 465 570 -93 294 313 31 22 chr5 46515467 46515646 -153114504 - L1MDa LINE L1 -5029 1501 1311 1859 101 11 18 chr5 46515973 46516249 -153113901 + AluSq SINE Alu 1 274 -39 210 37 0 0 chr5 46516554 46516581 -153113569 + (CTG)n Simple_repeat Simple_repeat 3 29 0 276 227 135 123 chr5 46517132 46517295 -153112855 + MER5B DNA MER1_type 5 169 -9 1890 163 0 0 chr5 46519744 46520051 -153110099 + AluJb SINE Alu 1 307 -5 2188 115 0 0 chr5 46520714 46521018 -153109132 - AluSc SINE Alu -5 304 1 476 254 16 60 chr5 46521045 46521230 -153108920 + MER104 DNA MER2_type 1 177 -3 218 215 123 0 chr5 46521507 46521572 -153108578 + MIR SINE MIR 116 188 -74 21 36 0 0 chr5 46521843 46521871 -153108279 + AT_rich Low_complexity Low_complexity 1 28 0 2394 49 0 0 chr5 46522290 46522576 -153107574 + AluY SINE Alu 1 286 -25 24 32 0 0 chr5 46523762 46523793 -153106357 + AT_rich Low_complexity Low_complexity 1 31 0 364 302 83 79 chr5 46524433 46524926 -153105224 - L2 LINE L2 -922 2392 1898 1468 147 60 23 chr5 46525504 46525803 -153104347 - MER2 DNA MER2_type -35 310 1 23 33 0 0 chr5 46525846 46525876 -153104274 + AT_rich Low_complexity Low_complexity 1 30 0 299 213 154 15 chr5 46525985 46526121 -153104029 - L1ME4a LINE L1 -4 6117 5963 2371 74 0 37 chr5 46526737 46527060 -153103090 + AluY SINE Alu 1 311 0 27 29 0 0 chr5 46527972 46528006 -153102144 + AT_rich Low_complexity Low_complexity 1 34 0 430 294 83 52 chr5 46528086 46528338 -153101812 - MIR SINE MIR -1 261 2 2224 92 0 0 chr5 46528552 46528868 -153101282 - AluSg SINE Alu 0 316 1 3763 59 34 0 chr5 46531286 46531760 -153098390 + LTR2B LTR ERV1 1 490 0 2413 107 8 16 chr5 46531760 46532143 -153098007 + Harlequin LTR ERV1 1 380 -6516 768 102 8 0 chr5 46532138 46532256 -153097894 + Harlequin LTR ERV1 262 380 -6516 * 4374 77 12 22 chr5 46532251 46532899 -153097251 + Harlequin LTR ERV1 262 903 -5993 * 6358 64 16 20 chr5 46532884 46533891 -153096259 + Harlequin LTR ERV1 1572 2574 -4322 * 23428 109 7 8 chr5 46533890 46537436 -153092714 + Harlequin LTR ERV1 3352 6896 0 3909 64 8 0 chr5 46537436 46537922 -153092228 + LTR2B LTR ERV1 1 490 0 548 214 31 0 chr5 46538186 46538284 -153091866 + FRAM SINE Alu 4 104 -72 1581 174 34 34 chr5 46538285 46538613 -153091537 - MER61C LTR ERV1 -3 431 104 305 197 0 0 chr5 46538662 46538723 -153091427 + Alu SINE Alu 235 295 -7 2117 122 10 0 chr5 46538742 46539046 -153091104 + AluSq SINE Alu 1 307 -6 338 316 36 65 chr5 46539178 46539317 -153090833 - L2 LINE L2 -16 3256 3122 737 76 29 0 chr5 46539529 46539634 -153090516 + MER30B DNA MER1_type 1 108 -82 23 0 0 0 chr5 46539901 46539924 -153090226 + AT_rich Low_complexity Low_complexity 1 23 0 3909 127 22 9 chr5 46540089 46540734 -153089416 + MER39B LTR ERV1 1 653 0 230 269 0 0 chr5 46540781 46540833 -153089317 + (TATG)n Simple_repeat Simple_repeat 4 55 0 554 245 176 34 chr5 46541006 46541210 -153088940 - MIR SINE MIR 0 262 30 243 227 0 0 chr5 46541265 46541331 -153088819 + (TA)n Simple_repeat Simple_repeat 1 66 0 217 367 19 13 chr5 46541688 46541846 -153088304 - L3 LINE CR1 -66 1511 1353 228 241 0 0 chr5 46542619 46542677 -153087473 + (CA)n Simple_repeat Simple_repeat 2 59 0 679 240 32 7 chr5 46542743 46542897 -153087253 + MIR SINE MIR 7 164 -98 377 334 56 35 chr5 46543005 46543362 -153086788 + MLT1J LTR MaLR 100 467 -44 3658 132 153 51 chr5 46543362 46544111 -153086039 + LTR1B LTR ERV1 1 826 0 377 334 56 35 chr5 46544111 46544127 -153086023 + MLT1J LTR MaLR 467 481 -30 649 213 0 8 chr5 46544224 46544346 -153085804 + FLAM_C SINE Alu 1 121 -12 357 82 0 0 chr5 46544353 46544402 -153085748 + (CA)n Simple_repeat Simple_repeat 2 50 0 235 346 116 14 chr5 46545755 46546092 -153084058 - L2 LINE L2 -193 3079 2651 3176 74 16 0 chr5 46546190 46546620 -153083530 - L1PA13 LINE L1 -3 6160 5724 201 254 84 28 chr5 46547448 46547519 -153082631 - L2 LINE L2 0 3272 3198 357 134 76 199 chr5 46547743 46547833 -153082317 + LOR1a LTR ERV1 1 62 -435 2359 95 3 0 chr5 46547833 46548137 -153082013 - AluSp SINE Alu -8 305 1 357 134 76 199 chr5 46548137 46548217 -153081933 + LOR1a LTR ERV1 62 150 -347 1332 170 0 0 chr5 46548231 46548449 -153081701 + LOR1a LTR ERV1 280 497 0 213 217 0 0 chr5 46548629 46548675 -153081475 + (CCTA)n Simple_repeat Simple_repeat 2 47 0 2008 319 75 14 chr5 46548853 46549665 -153080485 + L2 LINE L2 1848 2709 -605 835 195 151 0 chr5 46549665 46549850 -153080300 + MER20 DNA MER1_type 2 214 -5 510 343 66 26 chr5 46549850 46550115 -153080035 + L2 LINE L2 2731 3004 -268 447 288 207 27 chr5 46550115 46550337 -153079813 - MIR SINE MIR 0 262 1 600 264 109 49 chr5 46550341 46550407 -153079743 + L2 LINE L2 3010 3071 -242 1945 142 0 0 chr5 46550407 46550709 -153079441 + AluSx SINE Alu 1 302 0 600 264 109 49 chr5 46550709 46550925 -153079225 + L2 LINE L2 3071 3310 -3 639 300 116 4 chr5 46550951 46551184 -153078966 + MIR SINE MIR 2 260 -2 5281 123 35 16 chr5 46551744 46552381 -153077769 + L1PA14 LINE L1 4753 5376 -785 6936 68 26 0 chr5 46552381 46553255 -153076895 - MER11D LTR ERVK 0 897 1 5281 123 35 16 chr5 46553255 46554001 -153076149 + L1PA14 LINE L1 5376 6161 0 309 246 0 0 chr5 46554232 46554301 -153075849 + MLT1F1 LTR MaLR 1 69 -473 2111 203 30 28 chr5 46554304 46554906 -153075244 + pTR5 LTR ERV1 742 1344 -1094 4691 110 56 72 chr5 46554922 46555757 -153074393 + LTR12 LTR ERV1 5 826 0 1449 248 83 19 chr5 46555758 46556226 -153073924 + MLT1F1 LTR MaLR 70 567 0 1836 184 34 11 chr5 46557278 46557659 -153072491 + MLT1B LTR MaLR 1 390 0 532 247 46 17 chr5 46557980 46558154 -153071996 + MIR SINE MIR 84 262 0 32 26 0 0 chr5 46559804 46559843 -153070307 + AT_rich Low_complexity Low_complexity 1 39 0 1555 32 5 0 chr5 46559867 46560056 -153070094 - L1PA4 LINE L1 0 6155 5966 241 54 0 0 chr5 46560056 46560093 -153070057 + L1P LINE L1 5300 5336 -795 414 229 57 130 chr5 46560400 46560465 -153069685 - MER5B DNA MER1_type 0 178 110 2249 101 0 19 chr5 46560465 46560772 -153069378 + AluSc SINE Alu 1 301 -8 414 229 57 130 chr5 46560772 46560898 -153069252 - MER5B DNA MER1_type -68 110 1 1651 221 73 53 chr5 46560978 46561529 -153068621 - MER68 LTR ERV1 0 562 1 622 233 0 9 chr5 46562276 46562392 -153067758 + AluJb SINE Alu 3 117 -195 7381 39 0 0 chr5 46562422 46564070 -153066080 - L1PA4 LINE L1 0 6155 4506 366 294 5 98 chr5 46564421 46564480 -153065670 - MIR3 SINE MIR -9 199 136 2286 97 7 0 chr5 46564480 46564778 -153065372 + AluSq SINE Alu 1 300 -13 366 294 5 98 chr5 46564778 46564902 -153065248 - MIR3 SINE MIR -72 136 33 205 57 86 0 chr5 46564922 46564957 -153065193 + T-rich Low_complexity Low_complexity 2 39 0 2310 67 0 64 chr5 46565320 46565647 -153064503 + AluY SINE Alu 2 307 -4 1236 202 73 37 chr5 46566133 46566820 -153063330 + L1ME LINE L1 4914 5669 -497 3949 163 14 9 chr5 46566823 46567559 -153062591 + L1MB3 LINE L1 5444 6182 -1 2030 80 44 7 chr5 46567578 46567853 -153062297 - AluSc SINE Alu -12 297 13 206 326 82 22 chr5 46567877 46568012 -153062138 - L2 LINE L2 -1569 1745 1603 386 226 29 58 chr5 46568092 46568229 -153061921 - MIR SINE MIR -12 250 118 620 205 0 9 chr5 46568335 46568447 -153061703 + FLAM_A SINE Alu 11 121 -21 21 0 0 0 chr5 46568447 46568468 -153061682 + AT_rich Low_complexity Low_complexity 1 21 0 256 348 22 11 chr5 46568830 46569014 -153061136 + L1MEc LINE L1 1398 1583 -4813 180 0 0 0 chr5 46569043 46569063 -153061087 + (TAAAA)n Simple_repeat Simple_repeat 5 24 0 837 174 0 0 chr5 46569426 46569558 -153060592 - FLAM_C SINE Alu -1 132 1 180 0 0 0 chr5 46569835 46569855 -153060295 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1541 103 0 0 chr5 46570051 46570246 -153059904 - AluSg/x SINE Alu -10 300 106 727 249 6 0 chr5 46570475 46570644 -153059506 - MER58B DNA MER1_type 0 341 172 22 35 0 0 chr5 46570683 46570712 -153059438 + AT_rich Low_complexity Low_complexity 1 29 0 1458 149 57 19 chr5 46570901 46571217 -153058933 + MER4A LTR ERV1 1 328 -336 302 174 3 31 chr5 46571397 46571483 -153058667 + MER4C LTR ERV1 383 610 0 398 245 124 26 chr5 46571648 46571977 -153058173 + L1MEc LINE L1 2521 2882 -3333 524 329 70 20 chr5 46572024 46572367 -153057783 - LTR16C LTR ERVL -33 458 99 195 358 116 0 chr5 46573300 46573395 -153056755 - MIR3 SINE MIR -43 165 60 495 236 216 0 chr5 46573863 46574011 -153056139 - MER5A DNA MER1_type 0 189 10 408 305 4 49 chr5 46574328 46574573 -153055577 + MIR SINE MIR 6 235 -27 1058 199 23 23 chr5 46575290 46575506 -153054644 + MER20 DNA MER1_type 1 216 -3 329 261 0 11 chr5 46575726 46575814 -153054336 + L1MEc LINE L1 206 292 -6271 320 294 93 7 chr5 46575932 46576101 -153054049 + L1MEc LINE L1 1199 1379 -5005 14314 182 10 4 chr5 46577333 46581138 -153049012 - L1PB1 LINE L1 -1 6866 3040 38859 74 28 4 chr5 46581148 46587147 -153043003 + L1PA6 LINE L1 11 6154 0 11143 97 37 7 chr5 46587152 46589365 -153040785 - L1PB1 LINE L1 -3804 3058 636 970 167 70 0 chr5 46589367 46589553 -153040597 - L1PB1 LINE L1 -6663 200 2 2354 90 0 0 chr5 46590320 46590621 -153039529 + AluY SINE Alu 1 301 -10 948 284 144 27 chr5 46591266 46591717 -153038433 + LTR33 LTR ERVL 8 511 -10 197 174 23 46 chr5 46591853 46591907 -153038243 + MIR SINE MIR 42 94 -114 282 254 0 0 chr5 46592061 46592171 -153037979 + (CA)n Simple_repeat Simple_repeat 2 111 0 307 246 8 97 chr5 46592958 46593092 -153037058 - LTR16A1 LTR ERVL -333 124 3 252 284 0 27 chr5 46593350 46593424 -153036726 + L2 LINE L2 3195 3266 -47 338 224 86 43 chr5 46593468 46593584 -153036566 - MIR SINE MIR -61 201 81 361 240 55 65 chr5 46595063 46595263 -153034887 + MIR SINE MIR 65 262 0 416 251 163 30 chr5 46596176 46596379 -153033771 + MIR SINE MIR 33 262 0 402 21 0 0 chr5 46597404 46597451 -153032699 + (TG)n Simple_repeat Simple_repeat 2 48 0 569 314 83 22 chr5 46599246 46599609 -153030541 - LTR16C LTR ERVL -8 483 99 825 184 32 6 chr5 46599648 46599806 -153030344 - L1MA9 LINE L1 -146 6166 6005 714 201 43 18 chr5 46599806 46599970 -153030180 + MLT1F1 LTR MaLR 398 565 -2 368 281 0 16 chr5 46599975 46600096 -153030054 + L1ME4a LINE L1 5786 5904 -217 301 241 60 24 chr5 46600414 46600497 -153029653 + MLT1K LTR MaLR 472 557 -31 180 365 0 0 chr5 46600643 46600706 -153029444 - MER5A DNA MER1_type -40 149 87 3018 208 69 43 chr5 46600732 46601766 -153028384 - L1 LINE L1 -3283 4282 3217 3423 123 9 61 chr5 46601840 46602480 -153027670 + MER4B LTR ERV1 1 779 0 1622 318 167 28 chr5 46603053 46603958 -153026192 + L2 LINE L2 1678 2455 -858 1600 184 7 3 chr5 46603958 46604246 -153025904 - AluJo SINE Alu -13 299 11 1622 318 167 28 chr5 46604246 46604780 -153025370 + L2 LINE L2 2455 3313 0 25 31 0 0 chr5 46605234 46605266 -153024884 + AT_rich Low_complexity Low_complexity 1 32 0 773 208 30 6 chr5 46605764 46605932 -153024218 - MER3 DNA MER1_type -4 205 34 2149 205 14 70 chr5 46605932 46606449 -153023701 + LTR64 LTR ERVK 1 488 -70 648 325 33 10 chr5 46606633 46606935 -153023215 - L2 LINE L2 -1221 2093 1785 1329 154 202 4 chr5 46607062 46607315 -153022835 - AluSx SINE Alu -8 304 2 357 177 0 0 chr5 46608489 46608568 -153021582 + (TA)n Simple_repeat Simple_repeat 1 79 0 1486 199 11 28 chr5 46608570 46608856 -153021294 - AluJo SINE Alu -31 281 1 361 212 242 35 chr5 46608868 46609066 -153021084 - L1MC5 LINE L1 -447 7514 7276 788 250 57 20 chr5 46609156 46609480 -153020670 - L1MC4a LINE L1 -632 7233 6923 354 180 169 77 chr5 46609501 46609684 -153020466 - L2 LINE L2 -1218 2096 1897 198 0 0 0 chr5 46609703 46609725 -153020425 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1571 114 9 0 chr5 46609746 46609956 -153020194 - AluSg/x SINE Alu -2 310 99 486 318 71 24 chr5 46611429 46611766 -153018384 + L1M4 LINE L1 3704 4056 -2090 2397 43 11 0 chr5 46612979 46613285 -153016865 + AluY SINE Alu 1 309 0 685 219 15 0 chr5 46613285 46613422 -153016728 - L1M3 LINE L1 -476 5707 5569 180 247 91 13 chr5 46614324 46614401 -153015749 + L3 LINE CR1 845 927 -650 1287 159 19 24 chr5 46614544 46614715 -153015435 + L1PA13 LINE L1 5888 6063 -100 2446 127 31 3 chr5 46614715 46615069 -153015081 + THE1B LTR MaLR 1 364 0 1287 159 19 24 chr5 46615069 46615149 -153015001 + L1PA13 LINE L1 6063 6142 -21 23 78 0 0 chr5 46615350 46615401 -153014749 + AT_rich Low_complexity Low_complexity 1 51 0 1908 166 9 21 chr5 46616213 46616550 -153013600 + MER1B DNA MER1_type 1 333 -6 418 191 12 0 chr5 46616704 46616788 -153013362 + AluJ/FRAM SINE Alu 228 312 0 600 274 53 41 chr5 46618048 46618366 -153011784 - L1M4 LINE L1 -2088 4058 3737 2147 96 38 0 chr5 46620520 46620813 -153009337 + AluSp SINE Alu 2 305 -8 1284 66 38 89 chr5 46620870 46621083 -153009067 - AluY SINE Alu -2 309 108 235 270 27 14 chr5 46621159 46621233 -153008917 + MIR SINE MIR 47 121 -141 2124 107 4 0 chr5 46621577 46621858 -153008292 + AluSg SINE Alu 1 282 -28 207 88 0 0 chr5 46621858 46621892 -153008258 + (CA)n Simple_repeat Simple_repeat 2 35 0 2095 115 10 0 chr5 46622293 46622588 -153007562 + AluSq SINE Alu 1 298 -15 1530 219 60 31 chr5 46622880 46623339 -153006811 + MER41B LTR ERV1 109 486 0 273 100 67 50 chr5 46623645 46623705 -153006445 + L1MB4 LINE L1 6119 6179 -1 1171 129 10 35 chr5 46624413 46624614 -153005536 + MSTC LTR MaLR 1 196 -232 1015 153 21 168 chr5 46625165 46625498 -153004652 + MLT1A2 LTR MaLR 1 284 -90 1496 166 60 42 chr5 46627033 46627364 -153002786 - MER1B DNA MER1_type 0 337 1 303 185 0 15 chr5 46627519 46627584 -153002566 + AluJ/FRAM SINE Alu 233 296 -6 302 193 45 91 chr5 46628416 46628504 -153001646 - MER66B LTR ERV1 0 486 403 * 1172 216 5 67 chr5 46628472 46628861 -153001289 - MER41B LTR ERV1 -47 588 224 189 154 0 0 chr5 46628935 46628974 -153001176 + T-rich Low_complexity Low_complexity 1 39 0 285 156 73 110 chr5 46629262 46629371 -153000779 + MER104 DNA Tc2 37 141 -39 5834 67 5 158 chr5 46629371 46630492 -152999658 + SVA Other Other 10 959 -427 2747 88 19 36 chr5 46630493 46630960 -152999190 + SVA Other Other 6 464 -922 3019 176 82 8 chr5 46631065 46631683 -152998467 + L1MB3 LINE L1 5506 6169 -14 1837 183 0 31 chr5 46633036 46633089 -152997061 + MER1B DNA MER1_type 2 55 -2657 2284 86 122 0 chr5 46633089 46633425 -152996725 + MER51B LTR ERV1 1 377 0 1837 183 0 31 chr5 46633425 46633720 -152996430 + MER1B DNA MER1_type 55 339 0 415 67 0 100 chr5 46633875 46633965 -152996185 + AluJ/FRAM SINE Alu 232 312 0 22 0 0 0 chr5 46634289 46634311 -152995839 + AT_rich Low_complexity Low_complexity 1 22 0 197 284 27 14 chr5 46635328 46635402 -152994748 - MIR SINE MIR -141 121 47 1157 145 0 11 chr5 46636396 46636582 -152993568 - AluSg/x SINE Alu 0 312 129 1177 108 0 0 chr5 46636698 46636846 -152993304 - AluSg SINE Alu -155 155 8 406 293 70 35 chr5 46638103 46638444 -152991706 + L1 LINE L1 3703 4055 -2091 375 23 0 0 chr5 46639885 46639929 -152990221 + (TC)n Simple_repeat Simple_repeat 1 44 0 1219 95 4 1 chr5 46639930 46640176 -152989974 - AluSc SINE Alu -31 278 2 21 0 0 0 chr5 46640888 46640909 -152989241 + AT_rich Low_complexity Low_complexity 1 21 0 2102 114 26 3 chr5 46641547 46641853 -152988297 + AluSp SINE Alu 1 313 0 1198 229 28 0 chr5 46642165 46642418 -152987732 - MER31-int LTR ERV1 -808 4128 3869 2651 43 0 0 chr5 46642857 46643158 -152986992 + AluY SINE Alu 1 301 -10 2282 106 3 0 chr5 46644107 46644410 -152985740 - AluSp SINE Alu -9 304 1 1490 196 56 3 chr5 46644416 46644702 -152985448 - AluJb SINE Alu -11 301 1 1124 166 40 36 chr5 46645458 46645681 -152984469 + AluJb SINE Alu 83 306 -6 271 188 25 62 chr5 46645691 46645771 -152984379 + L1 LINE L1 4674 4750 -1396 * 430 146 52 34 chr5 46645769 46645887 -152984263 + L1PA16 LINE L1 5859 5971 -195 926 86 0 72 chr5 46645888 46646027 -152984123 + AluSx SINE Alu 1 129 -184 543 69 83 18 chr5 46646027 46646304 -152983846 + (TA)n Simple_repeat Simple_repeat 1 295 0 1149 148 17 0 chr5 46646305 46646481 -152983669 + AluSx SINE Alu 123 301 -9 609 201 23 114 chr5 46646482 46646701 -152983449 + L1PA16 LINE L1 5963 6161 -5 1637 74 0 5 chr5 46646741 46646943 -152983207 + AluSq SINE Alu 1 201 -112 692 202 0 0 chr5 46647061 46647180 -152982970 - AluJb SINE Alu -192 120 2 1896 151 16 7 chr5 46647253 46647558 -152982592 - AluSx SINE Alu -4 308 1 189 272 117 0 chr5 46647634 46647737 -152982413 + L2 LINE L2 3054 3168 -145 1723 182 13 7 chr5 46647898 46648205 -152981945 + AluJo SINE Alu 1 309 -3 5715 155 40 22 chr5 46648205 46649000 -152981150 - MER31-int LTR ERV1 -1479 5119 4294 1548 157 45 11 chr5 46649000 46649286 -152980864 + AluSx SINE Alu 1 296 -16 5715 155 40 22 chr5 46649286 46649617 -152980533 - MER31-int LTR ERV1 -2304 4294 3970 236 291 196 20 chr5 46650273 46650340 -152979810 - MER69A DNA AcHobo -2352 174 120 2249 118 3 0 chr5 46650340 46650644 -152979506 + AluSx SINE Alu 1 305 -7 236 291 196 20 chr5 46650644 46650724 -152979426 - MER69A DNA AcHobo -2406 120 1 775 248 71 50 chr5 46651198 46651520 -152978630 + L1M4 LINE L1 3703 4031 -2115 1573 159 222 17 chr5 46651524 46651982 -152978168 + LTR49 LTR ERV1 165 593 -2 2045 165 24 13 chr5 46651986 46652362 -152977788 + LTR49-int LTR ERV1 1 380 -5951 2037 125 0 0 chr5 46652362 46652642 -152977508 - AluSx SINE Alu -17 295 16 1448 162 97 25 chr5 46652644 46652922 -152977228 - AluJo SINE Alu -14 298 1 279 183 21 151 chr5 46652924 46653017 -152977133 - MER34C LTR ERV1 -492 93 13 1362 120 4 52 chr5 46653530 46653653 -152976497 + AluSg/x SINE Alu 65 175 -135 6483 181 52 12 chr5 46653653 46654683 -152975467 + MER11C LTR ERVK 1 1071 0 1362 120 4 52 chr5 46654683 46654813 -152975337 + AluSg/x SINE Alu 175 310 0 273 254 22 65 chr5 46654899 46655037 -152975113 + MER104 DNA Tc2 5 136 -44 1589 175 3 26 chr5 46655080 46655388 -152974762 - AluJo SINE Alu -8 304 4 735 171 0 0 chr5 46655824 46655953 -152974197 - AluJo SINE Alu -75 237 109 1557 157 33 30 chr5 46656789 46657206 -152972944 + AluJo SINE Alu 7 424 0 1908 108 29 4 chr5 46657347 46657624 -152972526 - AluSx SINE Alu -14 298 15 23 0 0 0 chr5 46659394 46659417 -152970733 + AT_rich Low_complexity Low_complexity 1 23 0 386 132 9 123 chr5 46660668 46660774 -152969376 + L1MC4 LINE L1 7752 7845 -197 1847 127 12 0 chr5 46660823 46661082 -152969068 - AluSx SINE Alu -39 273 12 1734 119 50 53 chr5 46661144 46661446 -152968704 + AluSq SINE Alu 5 305 -8 520 270 125 85 chr5 46661847 46662079 -152968071 - LTR33 LTR ERVL -19 502 281 1562 205 0 7 chr5 46662079 46662248 -152967902 - AluJo SINE Alu -7 305 136 287 43 0 43 chr5 46662248 46662294 -152967856 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 2099 101 29 4 chr5 46662294 46662570 -152967580 - AluSq SINE Alu -30 283 1 1562 205 0 7 chr5 46662570 46662696 -152967454 - AluJo SINE Alu -174 138 11 520 270 125 85 chr5 46662696 46662944 -152967206 - LTR33 LTR ERVL -240 281 3 2023 141 3 3 chr5 46662981 46663279 -152966871 - AluSx SINE Alu -14 298 1 2238 268 37 36 chr5 46663379 46663693 -152966457 + L1M4 LINE L1 3473 3785 -2361 2398 69 0 23 chr5 46663693 46663996 -152966154 + AluY SINE Alu 1 296 -15 2238 268 37 36 chr5 46663996 46664512 -152965638 + L1M4 LINE L1 3785 4304 -1842 2173 103 10 0 chr5 46664832 46665134 -152965016 - AluSq SINE Alu -8 305 1 7443 44 2 0 chr5 46665299 46666296 -152963854 + L1PA4 LINE L1 5147 6150 -5 3053 68 63 0 chr5 46666296 46666693 -152963457 + MER11D LTR ERVK 476 897 0 1413 129 0 14 chr5 46666693 46666902 -152963248 + AluSg/x SINE Alu 93 298 -14 1462 194 0 52 chr5 46666961 46667271 -152962879 + AluJo SINE Alu 2 295 -17 323 203 31 0 chr5 46667687 46667751 -152962399 + MER75 DNA T2_type 1 66 -448 1978 150 3 10 chr5 46667766 46668073 -152962077 - AluSq SINE Alu -6 307 3 181 323 62 23 chr5 46669463 46669593 -152960557 - MIR SINE MIR -119 143 9 1858 164 0 43 chr5 46669610 46669933 -152960217 - AluJb SINE Alu -3 309 1 1986 134 24 0 chr5 46670197 46670489 -152959661 - AluSq SINE Alu -14 299 1 2134 110 0 35 chr5 46670955 46671272 -152958878 + AluY SINE Alu 1 306 -5 714 183 77 48 chr5 46671314 46671522 -152958628 + AluJb SINE Alu 83 296 -16 1337 170 73 28 chr5 46671568 46671856 -152958294 + L1PA16 LINE L1 5859 6159 -7 30 59 0 0 chr5 46673224 46673275 -152956875 + AT_rich Low_complexity Low_complexity 1 51 0 3915 114 34 16 chr5 46673427 46674051 -152956099 - L1PA13 LINE L1 -3 6160 5526 2031 128 0 4 chr5 46674351 46674655 -152955495 + AluSg SINE Alu 2 304 0 380 266 46 28 chr5 46675069 46675178 -152954972 - MLT1A2 LTR MaLR -90 284 174 198 209 0 0 chr5 46675179 46675222 -152954928 + GA-rich Low_complexity Low_complexity 2 44 0 658 176 61 34 chr5 46675256 46675404 -152954746 - MLT1A2 LTR MaLR -222 152 1 222 37 0 0 chr5 46675536 46675563 -152954587 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 6674 168 12 34 chr5 46675589 46676876 -152953274 - LTR57-int LTR ERVL -3512 1831 573 2477 57 0 10 chr5 46676876 46677177 -152952973 + AluY SINE Alu 1 298 -13 643 242 0 8 chr5 46677301 46677429 -152952721 + LTR57-int LTR ERVL 8 134 -5209 462 349 18 22 chr5 46677445 46677717 -152952433 + L1ME LINE L1 5463 5733 -429 * 578 154 31 33 chr5 46677679 46677845 -152952305 - L1M4 LINE L1 -680 5494 5335 2144 203 80 2 chr5 46677863 46678301 -152951849 + MER70A LTR ERVL 1 472 0 1665 98 18 4 chr5 46678403 46678628 -152951522 - AluSg/x SINE Alu -17 295 68 274 32 0 0 chr5 46678628 46678659 -152951491 + AluY SINE Alu 14 44 -258 237 159 0 0 chr5 46680212 46680256 -152949894 + CT-rich Low_complexity Low_complexity 2 45 0 411 21 0 0 chr5 46680681 46680729 -152949421 + (CA)n Simple_repeat Simple_repeat 2 49 0 2362 157 47 93 chr5 46681387 46681897 -152948253 - MER4B LTR ERV1 -11 768 236 2295 53 42 3 chr5 46681897 46682181 -152947969 - AluY SINE Alu -16 295 1 1932 134 4 0 chr5 46682181 46682457 -152947693 - AluSx SINE Alu -29 283 7 2362 157 47 93 chr5 46682457 46682577 -152947573 - MER4B LTR ERV1 -541 238 1 2108 125 7 3 chr5 46682726 46683030 -152947120 + AluSp SINE Alu 1 305 -8 1260 220 14 4 chr5 46684330 46684607 -152945543 - AluJb SINE Alu -28 284 5 180 245 0 0 chr5 46684814 46684867 -152945283 + CT-rich Low_complexity Low_complexity 3 55 0 201 162 0 0 chr5 46685442 46685479 -152944671 + A-rich Low_complexity Low_complexity 1 37 0 394 152 5 0 chr5 46685891 46685963 -152944187 - AluJ/FLAM SINE Alu -244 58 1 221 294 91 57 chr5 46685970 46686235 -152943915 - L2 LINE L2 -5 3308 3035 414 203 0 0 chr5 46686285 46686359 -152943791 + AluJ/FLAM SINE Alu 1 74 -238 4124 56 2 0 chr5 46686369 46686854 -152943296 + MER11D LTR ERVK 1 486 -411 40104 71 5 24 chr5 46686856 46692137 -152938013 + L1P LINE L1 1 5383 -763 2100 103 17 10 chr5 46692137 46692438 -152937712 + AluSg SINE Alu 1 303 -7 40104 71 5 24 chr5 46692438 46692514 -152937636 + L1P LINE L1 5377 5254 -887 7448 38 7 0 chr5 46692514 46693403 -152936747 + L1PA4 LINE L1 5254 6148 -7 540 256 88 47 chr5 46694965 46695305 -152934845 + L1M4 LINE L1 3705 4058 -2088 290 206 0 43 chr5 46696557 46696649 -152933501 - AluY SINE Alu 0 301 214 1647 179 30 27 chr5 46696787 46697123 -152933027 - MER1B DNA MER1_type 0 337 1 29 60 0 0 chr5 46697935 46697985 -152932165 + AT_rich Low_complexity Low_complexity 1 50 0 3880 136 11 0 chr5 46698143 46698768 -152931382 - L1PA13 LINE L1 -6 6157 5526 397 277 9 9 chr5 46699447 46699559 -152930591 - MLT1A2 LTR MaLR -90 284 173 216 264 0 0 chr5 46699559 46699612 -152930538 + GA-rich Low_complexity Low_complexity 2 54 0 770 139 44 44 chr5 46699630 46699788 -152930362 - MLT1A2 LTR MaLR -216 158 1 21 0 0 0 chr5 46699954 46699975 -152930175 + AT_rich Low_complexity Low_complexity 1 21 0 204 191 63 0 chr5 46700028 46700091 -152930059 + (TTAA)n Simple_repeat Simple_repeat 4 70 0 6988 161 29 25 chr5 46700117 46700439 -152929711 - LTR57-int LTR ERVL -3512 1831 1512 2525 59 0 3 chr5 46700439 46700744 -152929406 + AluY SINE Alu 1 304 -7 6988 161 29 25 chr5 46700744 46701710 -152928440 - LTR57-int LTR ERVL -3831 1512 538 640 227 23 8 chr5 46701780 46701912 -152928238 + LTR57-int LTR ERVL 1 134 -5209 612 295 46 69 chr5 46701928 46702409 -152927741 + L1ME3 LINE L1 5463 5932 -230 23 0 0 0 chr5 46703113 46703136 -152927014 + AT_rich Low_complexity Low_complexity 1 23 0 37 23 0 0 chr5 46703351 46703395 -152926755 + AT_rich Low_complexity Low_complexity 1 44 0 522 114 40 17 chr5 46703395 46703571 -152926579 + (TA)n Simple_repeat Simple_repeat 1 180 0 790 181 84 0 chr5 46703572 46703738 -152926412 + AluJb SINE Alu 121 300 -12 22 56 0 0 chr5 46707891 46707927 -152922223 + AT_rich Low_complexity Low_complexity 1 36 0 210 263 13 40 chr5 46708002 46708154 -152921996 + T-rich Low_complexity Low_complexity 1 148 0 1328 194 39 0 chr5 46708329 46708612 -152921538 + AluJb SINE Alu 1 294 -18 1489 184 57 13 chr5 46710321 46710503 -152919647 - AluJo SINE Alu 0 312 110 429 20 0 0 chr5 46710503 46710553 -152919597 + (TG)n Simple_repeat Simple_repeat 1 50 0 1489 184 57 13 chr5 46710553 46710669 -152919481 - AluJo SINE Alu -202 110 1 373 320 31 8 chr5 46710764 46710892 -152919258 - LTR33 LTR ERVL -373 148 18 1789 173 7 7 chr5 46710941 46711248 -152918902 - AluSx SINE Alu -5 307 1 2367 262 48 38 chr5 46711278 46712220 -152917930 + L1M4 LINE L1 3356 4306 -1840 715 158 0 0 chr5 46713712 46713852 -152916298 - AluSp/q SINE Alu 0 325 186 1113 39 16 0 chr5 46713852 46713981 -152916169 + AluY SINE Alu 1 131 -180 22 35 0 0 chr5 46714091 46714120 -152916030 + AT_rich Low_complexity Low_complexity 1 29 0 605 13 119 0 chr5 46714146 46714305 -152915845 + (TA)n Simple_repeat Simple_repeat 2 179 0 255 65 65 32 chr5 46714309 46714371 -152915779 + (TATAA)n Simple_repeat Simple_repeat 1 64 0 499 54 90 12 chr5 46714373 46714539 -152915611 + (TA)n Simple_repeat Simple_repeat 1 179 0 823 50 0 25 chr5 46714539 46714658 -152915492 - FLAM_C SINE Alu -14 119 4 1321 199 3 63 chr5 46715918 46716234 -152913916 + AluJb SINE Alu 9 305 -7 337 214 29 86 chr5 46716280 46716420 -152913730 - MER104 DNA Tc2 -44 136 5 1996 149 0 0 chr5 46716547 46716842 -152913308 - AluSx SINE Alu -17 295 1 423 0 0 0 chr5 46717299 46717346 -152912804 + (TG)n Simple_repeat Simple_repeat 1 47 0 344 176 24 71 chr5 46717416 46717501 -152912649 + MER34C LTR ERV1 13 93 -492 1233 206 98 18 chr5 46717503 46717779 -152912371 + AluJo SINE Alu 1 298 -14 1768 131 57 20 chr5 46717782 46718080 -152912070 + AluSx SINE Alu 1 309 -3 2028 130 38 12 chr5 46718130 46718476 -152911674 - LTR29-int LTR ERV1 -5976 355 1 550 164 231 51 chr5 46718482 46718677 -152911473 - LTR29 LTR ERV1 -4 618 389 * 1052 142 98 0 chr5 46718674 46718879 -152911271 - LTR49 LTR ERV1 -370 225 1 698 254 48 54 chr5 46718886 46719217 -152910933 - L1M4 LINE L1 -2115 4031 3703 3775 80 75 14 chr5 46719657 46720218 -152909932 + LTR61 LTR ERV1 1 595 0 483 237 151 13 chr5 46720254 46720406 -152909744 + MER69A DNA AcHobo 1 173 -4 3830 179 63 105 chr5 46720996 46721507 -152908643 + MER31-int LTR ERV1 3880 4411 -1920 1651 197 3 3 chr5 46721507 46721807 -152908343 + AluJb SINE Alu 1 300 -12 1965 154 3 0 chr5 46721808 46722101 -152908049 + AluSx SINE Alu 1 294 -18 3830 179 63 105 chr5 46722101 46722468 -152907682 + MER31-int LTR ERV1 4411 4792 -1539 2261 104 20 0 chr5 46722468 46722765 -152907385 - AluSp SINE Alu -10 303 1 3830 179 63 105 chr5 46722765 46722903 -152907247 + MER31-int LTR ERV1 4792 6163 -168 1583 197 97 18 chr5 46723027 46723428 -152906722 + MER39 LTR ERV1 275 707 0 36263 65 8 15 chr5 46724063 46728124 -152902026 + L1PA6 LINE L1 13 4100 -2054 2347 73 0 7 chr5 46728124 46728426 -152901724 - AluY SINE Alu -11 300 1 36263 65 8 15 chr5 46728426 46728543 -152901607 + L1PA6 LINE L1 4100 4216 -1938 4632 160 25 35 chr5 46728543 46729508 -152900642 + LTR5 LTR ERVK 1 955 -14 36263 65 8 15 chr5 46729508 46730989 -152899161 + L1PA6 LINE L1 4216 6148 -6 2299 50 6 50 chr5 46732957 46733276 -152896874 + AluY SINE Alu 1 305 -6 1811 90 62 31 chr5 46733285 46733752 -152896398 + AluSp SINE Alu 1 313 0 1649 198 36 52 chr5 46734370 46734738 -152895412 + MER61D LTR ERV1 3 463 -38 2144 85 0 0 chr5 46734738 46735043 -152895107 + AluSx SINE Alu 1 305 0 1649 198 36 52 chr5 46735043 46735082 -152895068 + MER61D LTR ERV1 463 501 0 32 0 0 0 chr5 46735661 46735693 -152894457 + AT_rich Low_complexity Low_complexity 1 32 0 1406 148 0 4 chr5 46736285 46736528 -152893622 + AluSg/x SINE Alu 67 308 -4 1972 110 82 25 chr5 46739147 46739502 -152890648 + THE1C LTR MaLR 1 375 0 2011 128 3 0 chr5 46739674 46739963 -152890187 - AluSx SINE Alu -22 290 1 1056 70 0 0 chr5 46740107 46740235 -152889915 + AluY SINE Alu 1 128 -183 1700 63 0 18 chr5 46740235 46740456 -152889694 + AluY SINE Alu 85 301 -10 296 200 35 96 chr5 46740577 46740692 -152889458 - MER34 LTR ERV1 -2 540 433 1306 90 55 10 chr5 46740692 46740893 -152889257 - AluY SINE Alu -3 308 99 348 110 0 5 chr5 46740893 46740956 -152889194 - Alu SINE Alu -257 44 1 2660 225 107 84 chr5 46741036 46742128 -152888022 + LTR28 LTR ERV1 1 633 -3 2151 94 0 0 chr5 46742182 46742469 -152887681 - AluY SINE Alu -19 292 6 489 167 36 167 chr5 46742566 46742722 -152887428 - LTR8A LTR ERV1 0 727 607 2275 79 3 16 chr5 46742722 46743037 -152887113 - AluSp SINE Alu -2 311 1 489 167 36 167 chr5 46743037 46743102 -152887048 - LTR8A LTR ERV1 -120 607 535 17688 100 37 12 chr5 46743102 46745656 -152884494 - HERVH48 LTR ERV1 -4036 2618 1 2416 117 32 59 chr5 46745656 46746065 -152884085 - MER48 LTR ERV1 0 398 1 207 204 0 0 chr5 46746364 46746418 -152883732 + GA-rich Low_complexity Low_complexity 3 56 0 230 348 79 6 chr5 46746513 46746677 -152883473 - L2 LINE L2 -973 2341 2166 522 199 86 163 chr5 46746855 46746939 -152883211 + MER34C LTR ERV1 1 90 -452 1951 115 3 56 chr5 46746939 46747262 -152882888 + AluSx SINE Alu 1 306 -6 522 199 86 163 chr5 46747262 46747411 -152882739 + MER34C LTR ERV1 90 249 -293 4417 177 21 38 chr5 46747411 46748396 -152881754 - LTR5 LTR ERVK 0 969 1 522 199 86 163 chr5 46748396 46748707 -152881443 + MER34C LTR ERV1 249 492 -50 2219 51 0 51 chr5 46748710 46748857 -152881293 + AluY SINE Alu 1 125 -186 2230 50 10 13 chr5 46748857 46749159 -152880991 + AluY SINE Alu 1 301 -10 2219 51 0 51 chr5 46749159 46749323 -152880827 + AluY SINE Alu 125 296 -15 718 174 65 7 chr5 46749449 46749587 -152880563 + LTR23 LTR ERV1 1 146 -291 790 199 0 19 chr5 46749610 46749766 -152880384 + FRAM SINE Alu 20 172 -4 2245 90 0 3 chr5 46749786 46750086 -152880064 + AluSq SINE Alu 1 299 -14 461 146 12 0 chr5 46750163 46750245 -152879905 + LTR23 LTR ERV1 160 242 -195 376 125 0 0 chr5 46750264 46750320 -152879830 - Alu SINE Alu -2 298 243 1793 107 4 4 chr5 46750360 46750623 -152879527 + AluSx SINE Alu 32 294 -18 497 235 34 34 chr5 46750635 46750754 -152879396 + FLAM_A SINE Alu 1 119 -14 513 313 37 31 chr5 46751426 46751720 -152878430 + L1ME3A LINE L1 5611 5906 -264 614 105 258 8 chr5 46751745 46751869 -152878281 - MER4C LTR ERV1 -20 445 291 1499 131 131 41 chr5 46751924 46752238 -152877912 - MER4A LTR ERV1 -322 342 1 855 219 38 16 chr5 46752860 46753043 -152877107 + AluJo SINE Alu 122 308 -4 242 30 0 0 chr5 46753143 46753176 -152876974 - L1PA15 LINE L1 -6 6159 6127 1285 203 13 51 chr5 46753176 46753487 -152876663 - MER4A LTR ERV1 -362 302 4 9601 135 55 66 chr5 46753490 46753751 -152876399 - LTR49-int LTR ERV1 -485 5846 5584 2421 72 0 0 chr5 46753751 46754055 -152876095 - AluY SINE Alu -7 304 1 9601 135 55 66 chr5 46754055 46754228 -152875922 - LTR49-int LTR ERV1 -747 5584 5411 2246 99 0 0 chr5 46754228 46754530 -152875620 - AluSx SINE Alu -10 302 1 9601 135 55 66 chr5 46754530 46755054 -152875096 - LTR49-int LTR ERV1 -920 5411 4883 2162 112 3 0 chr5 46755054 46755357 -152874793 - AluSc SINE Alu -4 305 2 9601 135 55 66 chr5 46755357 46755819 -152874331 - LTR49-int LTR ERV1 -1448 4883 4417 1857 118 7 26 chr5 46755819 46756123 -152874027 + AluY SINE Alu 1 298 -13 9601 135 55 66 chr5 46756123 46756682 -152873468 - LTR49-int LTR ERV1 -1914 4417 3886 180 0 0 0 chr5 46756691 46756711 -152873439 + (T)n Simple_repeat Simple_repeat 1 20 0 249 175 0 0 chr5 46756711 46756751 -152873399 - MER58A DNA MER1_type -26 81 42 6497 68 14 19 chr5 46756909 46758531 -152871619 - SVA Other Other -723 1386 5 1448 221 36 49 chr5 46758631 46758699 -152871451 + L1MDa LINE L1 54 121 -6419 1639 109 71 11 chr5 46758699 46758982 -152871168 + AluSx SINE Alu 2 301 -11 1448 221 36 49 chr5 46758982 46759303 -152870847 + L1MDa LINE L1 121 438 -6102 1334 180 51 4 chr5 46759306 46759562 -152870588 + AluSx SINE Alu 7 274 -38 3818 229 59 45 chr5 46759570 46760215 -152869935 + L1MDa LINE L1 600 1272 -5268 2170 90 3 13 chr5 46760215 46760514 -152869636 - AluY SINE Alu -15 296 1 3818 229 59 45 chr5 46760514 46761101 -152869049 + L1MDa LINE L1 1272 1849 -4691 269 252 67 51 chr5 46761096 46761342 -152868808 - L1MEc LINE L1 -4945 1174 924 * 2053 112 3 0 chr5 46761342 46761637 -152868513 - AluSx SINE Alu -16 296 1 269 252 67 51 chr5 46761637 46761759 -152868391 - L1MEc LINE L1 -5195 924 805 2315 86 7 0 chr5 46761990 46762292 -152867858 + AluSg SINE Alu 1 304 -6 2137 88 17 0 chr5 46762424 46762718 -152867432 + AluSp SINE Alu 1 299 -14 23 0 0 0 chr5 46763434 46763457 -152866693 + AT_rich Low_complexity Low_complexity 1 23 0 2177 88 0 3 chr5 46763725 46764022 -152866128 + AluY SINE Alu 1 296 -15 294 260 41 0 chr5 46764333 46764406 -152865744 + L2 LINE L2 3187 3262 -10 2036 74 0 15 chr5 46765533 46765802 -152864348 - AluSg SINE Alu -22 288 24 571 162 0 10 chr5 46766683 46766782 -152863368 + AluJ/FLAM SINE Alu 2 99 -213 21 0 0 0 chr5 46766792 46766813 -152863337 + GC_rich Low_complexity Low_complexity 1 21 0 2315 84 0 3 chr5 46767099 46767407 -152862743 - AluY SINE Alu -4 307 1 287 98 0 0 chr5 46768330 46768374 -152861776 - AluSg SINE Alu -267 36 1 2342 84 0 0 chr5 46768379 46768687 -152861463 - AluSg SINE Alu -2 308 1 2237 97 0 0 chr5 46769483 46769783 -152860367 - AluY SINE Alu -11 300 1 323 113 0 19 chr5 46769957 46770010 -152860140 + MSTB LTR MaLR 1 52 -374 800 129 0 8 chr5 46770018 46770142 -152860008 + AluJo/FLAM SINE Alu 9 131 -181 2109 87 17 0 chr5 46770142 46770265 -152859885 + AluY SINE Alu 1 120 -191 297 0 0 0 chr5 46770265 46770298 -152859852 + (CA)n Simple_repeat Simple_repeat 2 34 0 2109 87 17 0 chr5 46770298 46770492 -152859658 + AluY SINE Alu 120 311 0 587 241 9 0 chr5 46770501 46770617 -152859533 + MSTB LTR MaLR 55 171 -255 2091 106 3 31 chr5 46771253 46771575 -152858575 - AluSq SINE Alu 0 313 1 249 355 65 16 chr5 46771721 46771845 -152858305 + L2 LINE L2 3136 3265 -7 1950 158 0 3 chr5 46771967 46772278 -152857872 - AluJb SINE Alu 0 312 3 673 169 0 73 chr5 46772287 46772423 -152857727 - AluSq/x SINE Alu -180 132 7 4893 174 31 9 chr5 46772432 46773290 -152856860 - MER49 LTR ERV1 -42 881 5 2293 179 41 19 chr5 46774974 46775438 -152854712 - MER67A LTR ERV1 -69 474 1 2613 122 72 75 chr5 46775439 46775800 -152854350 - LTR64 LTR ERVK 0 558 197 2074 99 0 0 chr5 46775800 46776106 -152854044 - AluSq SINE Alu 0 306 1 2613 122 72 75 chr5 46776106 46776173 -152853977 - LTR64 LTR ERVK -361 197 131 225 0 0 0 chr5 46776173 46776198 -152853952 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2034 112 7 0 chr5 46776200 46776487 -152853663 - AluSx SINE Alu -23 289 1 2613 122 72 75 chr5 46776487 46776611 -152853539 - LTR64 LTR ERVK -428 130 3 1324 181 120 66 chr5 46777251 46777693 -152852457 + MER31B LTR ERV1 1 466 0 932 162 7 0 chr5 46777805 46777959 -152852191 + LTR49 LTR ERV1 4 158 -437 * 969 186 50 27 chr5 46777934 46778155 -152851995 + LTR49 LTR ERV1 370 595 0 5473 156 33 45 chr5 46778157 46779676 -152850474 + LTR49-int LTR ERV1 1 1481 -4465 861 155 26 42 chr5 46779797 46780048 -152850102 + LTR49-int LTR ERV1 1378 1669 -4662 1231 185 20 73 chr5 46780066 46780322 -152849828 + LTR49-int LTR ERV1 3305 3544 -2787 1710 179 3 31 chr5 46780322 46780640 -152849510 + AluJb SINE Alu 1 309 -3 1231 185 20 73 chr5 46780640 46780685 -152849465 + LTR49-int LTR ERV1 3544 3590 -2741 2082 110 0 0 chr5 46780752 46781043 -152849107 + AluSx SINE Alu 5 295 -17 1442 184 17 24 chr5 46781105 46781393 -152848757 - AluJo SINE Alu -26 286 1 647 153 105 43 chr5 46781393 46781630 -152848520 + LTR49-int LTR ERV1 3653 4353 -2450 7400 48 11 4 chr5 46781688 46783198 -152846952 + SVA Other Other 20 1383 -3 3197 72 11 11 chr5 46783224 46783666 -152846484 + SVA Other Other 944 1385 -1 198 0 0 0 chr5 46783839 46783861 -152846289 + (A)n Simple_repeat Simple_repeat 1 22 0 2869 167 12 112 chr5 46783896 46784077 -152846073 - LTR26 LTR ERV1 -1 602 404 216 0 0 0 chr5 46784077 46784101 -152846049 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1619 115 50 57 chr5 46784103 46784382 -152845768 - AluSg SINE Alu -33 277 1 2869 167 12 112 chr5 46784382 46784866 -152845284 - LTR26 LTR ERV1 -200 403 1 2336 69 3 0 chr5 46785271 46785574 -152844576 - AluY SINE Alu -7 304 1 207 297 200 12 chr5 46785675 46785840 -152844310 + MIR SINE MIR 38 233 -29 901 267 0 30 chr5 46786412 46786674 -152843476 + AluJo SINE Alu 2 255 -57 3243 168 16 14 chr5 46786674 46787194 -152842956 - LTR26 LTR ERV1 0 603 80 1791 181 77 48 chr5 46787194 46787609 -152842541 + MSTA LTR MaLR 2 428 0 3243 168 16 14 chr5 46787609 46787641 -152842509 - LTR26 LTR ERV1 -523 80 50 1582 220 94 13 chr5 46787641 46788014 -152842136 + MSTB LTR MaLR 1 403 -23 1864 135 138 39 chr5 46788014 46788428 -152841722 - MER4A LTR ERV1 0 664 122 2064 121 3 0 chr5 46788428 46788725 -152841425 - AluSp SINE Alu -15 298 1 1864 135 138 39 chr5 46788725 46788861 -152841289 - MER4A LTR ERV1 -542 122 1 8508 117 37 72 chr5 46788866 46790497 -152839653 - MER4A-int LTR ERV1 -1 6597 5023 213 39 0 0 chr5 46790537 46790563 -152839587 + (A)n Simple_repeat Simple_repeat 1 26 0 225 0 0 0 chr5 46790892 46790917 -152839233 + (A)n Simple_repeat Simple_repeat 1 25 0 2238 81 3 0 chr5 46791968 46792265 -152837885 + AluSc SINE Alu 1 298 -11 21 0 0 0 chr5 46794350 46794371 -152835779 + GC_rich Low_complexity Low_complexity 1 21 0 2037 119 7 0 chr5 46794595 46794905 -152835245 - AluSx SINE Alu 0 312 1 1951 89 18 32 chr5 46795154 46795435 -152834715 - AluSq SINE Alu 0 313 37 184 67 0 67 chr5 46795817 46795862 -152834288 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 31 58 0 0 chr5 46796070 46796122 -152834028 + AT_rich Low_complexity Low_complexity 1 52 0 1567 129 35 0 chr5 46797335 46797590 -152832560 + AluSx SINE Alu 31 294 -18 430 126 13 86 chr5 46797603 46797754 -152832396 + MER4B-int LTR ERV1 1862 2001 -4757 * 5297 170 47 30 chr5 46797750 46798151 -152831999 + MER4B-int LTR ERV1 3879 4272 -2326 369 0 0 0 chr5 46798151 46798192 -152831958 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 1560 197 0 0 chr5 46798192 46798471 -152831679 - AluJb SINE Alu -33 279 1 5297 170 47 30 chr5 46798471 46799278 -152830872 + MER4B-int LTR ERV1 4271 5109 -1489 1634 194 3 0 chr5 46799286 46799590 -152830560 - AluJo SINE Alu -7 305 1 191 315 65 60 chr5 46799607 46799791 -152830359 - L2 LINE L2 -1 3312 3128 860 149 13 7 chr5 46799802 46799956 -152830194 - AluSc SINE Alu -3 306 152 752 97 16 32 chr5 46800068 46800192 -152829958 - AluSp SINE Alu -190 123 2 1699 188 10 0 chr5 46800331 46800640 -152829510 + AluSx SINE Alu 1 312 0 620 231 0 15 chr5 46800708 46800842 -152829308 + FLAM_C SINE Alu 1 132 -1 915 177 79 129 chr5 46800848 46801165 -152828985 + AluJb SINE Alu 2 302 0 189 0 0 0 chr5 46801196 46801217 -152828933 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1378 184 75 18 chr5 46801262 46801540 -152828610 + L1PA16 LINE L1 5859 6152 -14 216 0 0 0 chr5 46802649 46802673 -152827477 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2267 292 49 17 chr5 46803102 46804024 -152826126 - L1M4 LINE L1 -1840 4306 3356 1626 186 0 13 chr5 46804054 46804355 -152825795 + AluSx SINE Alu 1 297 -15 1556 172 47 14 chr5 46804628 46804925 -152825225 + AluJo SINE Alu 1 307 -5 218 57 57 0 chr5 46804928 46804963 -152825187 + GA-rich Low_complexity Low_complexity 4 40 0 2164 107 0 0 chr5 46805056 46805347 -152824803 + AluSq SINE Alu 1 291 -22 2742 162 49 4 chr5 46805467 46805973 -152824177 + L1MB3 LINE L1 5463 5991 -192 1043 143 0 24 chr5 46807110 46807278 -152822872 - AluSg/x SINE Alu -22 288 125 207 0 0 0 chr5 46807278 46807301 -152822849 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2124 69 0 14 chr5 46807312 46807603 -152822547 - AluY SINE Alu -24 287 1 612 265 41 6 chr5 46807707 46807877 -152822273 - MER90 LTR ERV1 0 614 439 181 243 27 27 chr5 46807916 46807990 -152822160 - MIR SINE MIR 0 262 189 2023 77 22 0 chr5 46808599 46808893 -152821257 - AluSc SINE Alu 0 300 1 1700 184 61 11 chr5 46809388 46809799 -152820351 + MER61D LTR ERV1 1 501 0 1940 107 17 0 chr5 46810141 46810431 -152819719 - AluSx SINE Alu -17 295 1 308 217 112 87 chr5 46810692 46810853 -152819297 + L1M2 LINE L1 1676 1840 -5009 872 156 134 6 chr5 46811322 46811501 -152818649 + AluSq SINE Alu 67 268 -45 401 291 33 46 chr5 46811604 46811755 -152818395 + LTR33 LTR ERVL 17 165 -356 318 26 0 0 chr5 46812441 46812480 -152817670 + (CA)n Simple_repeat Simple_repeat 2 40 0 2656 161 66 23 chr5 46813144 46813723 -152816427 - MER4B LTR ERV1 -11 768 1 2122 74 0 7 chr5 46814185 46814468 -152815682 - AluY SINE Alu -30 281 1 1889 103 40 0 chr5 46814468 46814740 -152815410 - AluSq SINE Alu -7 306 24 2501 59 0 0 chr5 46815142 46815445 -152814705 - AluY SINE Alu -8 303 1 1345 191 7 7 chr5 46816029 46816306 -152813844 - AluJb SINE Alu -31 281 5 296 24 0 24 chr5 46816460 46816502 -152813648 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 196 151 19 19 chr5 46816545 46816598 -152813552 + CT-rich Low_complexity Low_complexity 3 55 0 182 88 0 29 chr5 46817192 46817226 -152812924 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2588 32 0 3 chr5 46820340 46820652 -152809498 + AluY SINE Alu 1 311 0 186 43 0 0 chr5 46820972 46820995 -152809155 + (TTTTTG)n Simple_repeat Simple_repeat 6 28 0 26 64 0 0 chr5 46821208 46821255 -152808895 + AT_rich Low_complexity Low_complexity 1 47 0 2658 155 30 65 chr5 46822519 46822961 -152807189 + MER57-int LTR ERV1 970 1426 -5172 2740 154 141 42 chr5 46822961 46823623 -152806527 - LTR8A LTR ERV1 0 727 1 2658 155 30 65 chr5 46823623 46823928 -152806222 + MER57-int LTR ERV1 1426 2485 -4113 814 146 46 0 chr5 46823934 46824064 -152806086 + AluSq/x SINE Alu 1 136 -177 2180 88 7 3 chr5 46824064 46824358 -152805792 + AluY SINE Alu 1 295 -16 6769 161 43 51 chr5 46824358 46824573 -152805577 + MER57-int LTR ERV1 3305 3520 -3078 180 0 0 0 chr5 46824573 46824593 -152805557 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2134 101 0 0 chr5 46824600 46824887 -152805263 - AluSc SINE Alu -22 287 1 6769 161 43 51 chr5 46824887 46825320 -152804830 + MER57-int LTR ERV1 3526 3961 -2637 1748 119 4 4 chr5 46825320 46825589 -152804561 + AluSg SINE Alu 42 310 0 6769 161 43 51 chr5 46825589 46825943 -152804207 + MER57-int LTR ERV1 3961 4316 -2282 1643 193 0 0 chr5 46825943 46826239 -152803911 - AluJb SINE Alu -16 296 1 6769 161 43 51 chr5 46826239 46826583 -152803567 + MER57-int LTR ERV1 4316 4661 -1937 8924 41 20 0 chr5 46826583 46827633 -152802517 + MER11C LTR ERVK 1 1071 0 6769 161 43 51 chr5 46827633 46828093 -152802057 + MER57-int LTR ERV1 4661 5109 -1489 1460 199 7 0 chr5 46828130 46828411 -152801739 - AluJo SINE Alu -25 287 5 351 0 0 0 chr5 46828555 46828594 -152801556 + (A)n Simple_repeat Simple_repeat 1 39 0 1862 149 0 10 chr5 46828789 46829091 -152801059 + AluSx SINE Alu 1 299 -13 1452 204 0 36 chr5 46829156 46829464 -152800686 + AluJo SINE Alu 1 297 -15 281 168 103 0 chr5 46829910 46830017 -152800133 + MER57-int LTR ERV1 2281 2398 -5418 * 1131 81 25 128 chr5 46830011 46830145 -152800005 + MER57-int LTR ERV1 2808 2954 -4862 2657 7 0 3 chr5 46830145 46830448 -152799702 - AluYa5 SINE Alu -9 302 1 1131 81 25 128 chr5 46830448 46830467 -152799683 + MER57-int LTR ERV1 2954 2973 -4843 1914 97 17 30 chr5 46830467 46830765 -152799385 - AluSp SINE Alu -11 302 9 1131 81 25 128 chr5 46830765 46830845 -152799305 + MER57-int LTR ERV1 2973 3018 -4798 644 58 39 29 chr5 46830851 46830955 -152799195 + MER57-int LTR ERV1 4899 5003 -2534 563 121 10 20 chr5 46830956 46831055 -152799095 + MER57-int LTR ERV1 5250 5347 -2190 1936 80 8 4 chr5 46831169 46831432 -152798718 + AluSq SINE Alu 40 303 -10 214 301 21 65 chr5 46831705 46831798 -152798352 + MIR3 SINE MIR 10 98 -110 314 245 88 125 chr5 46831805 46832021 -152798129 - L1ME LINE L1 -5420 1110 911 690 310 52 29 chr5 46832516 46832826 -152797324 - L1ME LINE L1 -6213 327 11 346 276 55 43 chr5 46832856 46833019 -152797131 + MER5B DNA MER1_type 13 177 -1 * 513 291 17 45 chr5 46833019 46833180 -152796970 + MER5A DNA MER1_type 34 189 0 2337 66 3 7 chr5 46834003 46834305 -152795845 + AluY SINE Alu 1 301 -10 1350 158 34 127 chr5 46834387 46834572 -152795578 - AluJo SINE Alu -10 292 148 1844 127 3 20 chr5 46834572 46834864 -152795286 - AluSx SINE Alu -25 287 1 1350 158 34 127 chr5 46834864 46835000 -152795150 - AluJo SINE Alu -154 148 1 245 203 101 29 chr5 46835059 46835128 -152795022 - MER46C DNA MER2_type -1 337 264 364 267 68 20 chr5 46835155 46835283 -152794867 - MER46C DNA MER2_type -140 198 61 2152 103 0 10 chr5 46835283 46835584 -152794566 - AluSg SINE Alu -12 298 1 364 267 68 20 chr5 46835584 46835601 -152794549 - MER46C DNA MER2_type -277 61 46 2136 100 10 6 chr5 46835613 46835924 -152794226 + AluSx SINE Alu 1 312 0 2298 93 0 3 chr5 46836196 46836509 -152793641 - AluSp SINE Alu -1 312 1 2106 114 0 3 chr5 46836510 46836808 -152793342 - AluSx SINE Alu -15 297 1 2060 103 7 3 chr5 46836824 46837116 -152793034 - AluSx SINE Alu -19 293 1 353 224 0 47 chr5 46837634 46837719 -152792431 + MIR SINE MIR 161 241 -21 262 307 79 0 chr5 46838036 46838137 -152792013 - MIR SINE MIR -65 143 35 2116 114 0 7 chr5 46838146 46838453 -152791697 - AluSx SINE Alu -7 305 1 1941 120 10 7 chr5 46838824 46839125 -152791025 + AluSq SINE Alu 1 302 -11 987 54 78 0 chr5 46839334 46839463 -152790687 + MER85 DNA T2_type 1 139 0 3775 200 57 8 chr5 46839463 46840327 -152789823 + L1 LINE L1 3429 4334 -1812 2125 97 16 10 chr5 46840327 46840638 -152789512 - AluSq SINE Alu 0 313 1 2181 82 3 0 chr5 46840648 46840939 -152789211 - AluSp SINE Alu -21 292 1 17372 102 38 19 chr5 46840995 46843574 -152786576 - HERVH48 LTR ERV1 -4026 2628 1 2416 117 32 59 chr5 46843574 46843983 -152786167 - MER48 LTR ERV1 0 398 1 195 204 0 0 chr5 46844282 46844336 -152785814 + GA-rich Low_complexity Low_complexity 3 56 0 211 284 57 0 chr5 46844507 46844595 -152785555 - L2 LINE L2 -1056 2258 2166 551 181 102 170 chr5 46844776 46844857 -152785293 + MER34C LTR ERV1 40 125 -460 1883 124 3 56 chr5 46844857 46845180 -152784970 + AluSx SINE Alu 1 306 -6 551 181 102 170 chr5 46845180 46845330 -152784820 + MER34C LTR ERV1 125 243 -342 4417 177 21 38 chr5 46845330 46846315 -152783835 - LTR5 LTR ERVK 0 969 1 551 181 102 170 chr5 46846315 46846424 -152783726 + MER34C LTR ERV1 243 358 -227 342 247 121 35 chr5 46846452 46846626 -152783524 + MER34 LTR ERV1 304 492 -50 2219 51 0 51 chr5 46846629 46846775 -152783375 + AluY SINE Alu 1 124 -187 2209 56 7 10 chr5 46846775 46847077 -152783073 + AluY SINE Alu 1 301 -10 2219 51 0 51 chr5 46847077 46847242 -152782908 + AluY SINE Alu 124 296 -15 842 113 8 0 chr5 46847442 46847566 -152782584 - AluSq/x SINE Alu -187 125 1 464 246 0 35 chr5 46847574 46847688 -152782462 - L1MDa LINE L1 -6429 111 2 2038 98 3 17 chr5 46847698 46847829 -152782321 + AluSg SINE Alu 1 132 -178 5689 90 37 15 chr5 46847829 46848637 -152781513 - LTR12 LTR ERV1 0 826 1 2038 98 3 17 chr5 46848637 46848802 -152781348 + AluSg SINE Alu 132 293 -17 2095 108 3 10 chr5 46848810 46849115 -152781035 + AluSg SINE Alu 1 303 -7 253 282 196 6 chr5 46849380 46849706 -152780444 + L1MEc LINE L1 1872 2259 -4137 2204 82 0 16 chr5 46849717 46850023 -152780127 + AluSg SINE Alu 1 301 -9 260 250 26 0 chr5 46850033 46850109 -152780041 - L2 LINE L2 -1182 2132 2055 2072 92 18 0 chr5 46850775 46851059 -152779091 - AluSg SINE Alu -21 289 1 442 352 190 0 chr5 46851117 46851333 -152778817 - MIR SINE MIR 0 262 6 1598 254 82 15 chr5 46851704 46852236 -152777914 + MLT1F1 LTR MaLR 1 567 0 258 342 0 51 chr5 46852280 46852397 -152777753 + L2 LINE L2 1355 1465 -1849 534 257 98 102 chr5 46852430 46852817 -152777333 + L2 LINE L2 1603 1989 -1325 2134 94 27 0 chr5 46852817 46853115 -152777035 - AluSp SINE Alu -7 306 1 534 257 98 102 chr5 46853115 46853248 -152776902 + L2 LINE L2 1989 2121 -1193 269 231 0 138 chr5 46853301 46853431 -152776719 - MER102a DNA MER1_type -1 329 218 1026 116 7 7 chr5 46853540 46853695 -152776455 + AluSq SINE Alu 1 155 -158 23 54 0 0 chr5 46853701 46853738 -152776412 + AT_rich Low_complexity Low_complexity 1 37 0 1906 86 90 4 chr5 46853744 46854022 -152776128 - AluY SINE Alu -8 303 2 2349 75 0 0 chr5 46854025 46854318 -152775832 - AluSg SINE Alu -7 303 11 569 296 123 76 chr5 46854382 46854741 -152775409 + L2 LINE L2 2173 2566 -748 1732 149 24 7 chr5 46854741 46855036 -152775114 - AluJb SINE Alu -12 300 1 569 296 123 76 chr5 46855036 46855204 -152774946 + L2 LINE L2 2566 2725 -589 760 114 8 23 chr5 46855384 46855515 -152774635 - FLAM_C SINE Alu -4 129 1 289 282 155 10 chr5 46855631 46855734 -152774416 + L2 LINE L2 3187 3304 -9 2088 95 3 0 chr5 46855919 46856214 -152773936 - AluSx SINE Alu -16 296 1 22 0 0 0 chr5 46856390 46856412 -152773738 + GC_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr5 46857727 46857748 -152772402 + (T)n Simple_repeat Simple_repeat 1 21 0 687 101 0 10 chr5 46859459 46859558 -152770592 + FLAM_A SINE Alu 4 101 -41 243 0 0 0 chr5 46859564 46859591 -152770559 + (TTTTC)n Simple_repeat Simple_repeat 1 27 0 207 318 82 0 chr5 46859595 46859680 -152770470 - MIR SINE MIR -98 164 73 349 345 144 16 chr5 46860105 46860299 -152769851 + MIR SINE MIR 30 248 -14 1207 168 0 23 chr5 46860305 46860525 -152769625 + AluJo SINE Alu 85 299 -13 522 217 54 8 chr5 46860776 46860905 -152769245 - AluJb SINE Alu -11 301 167 2229 60 3 16 chr5 46861022 46861336 -152768814 - AluY SINE Alu -1 310 1 637 195 143 17 chr5 46861337 46861568 -152768582 - HAL1b LINE L1 -246 1102 843 414 224 79 40 chr5 46861616 46861768 -152768382 + L1MEd LINE L1 990 1147 -4972 427 155 42 0 chr5 46861787 46861858 -152768292 + MLT1A2 LTR MaLR 1 74 -300 902 267 4 25 chr5 46862384 46862624 -152767526 + MIR SINE MIR 2 236 -26 428 208 17 92 chr5 46862778 46862898 -152767252 + MIR3 SINE MIR 46 156 -52 205 333 16 24 chr5 46864046 46864172 -152765978 + (CGTG)n Simple_repeat Simple_repeat 1 125 0 338 216 0 40 chr5 46864663 46864788 -152765362 + CT-rich Low_complexity Low_complexity 1 120 0 828 145 0 0 chr5 46866141 46866272 -152763878 - FLAM_A SINE Alu 0 142 12 1796 151 0 10 chr5 46866767 46867066 -152763084 + AluJb SINE Alu 6 301 -11 2238 62 0 24 chr5 46867732 46868052 -152762098 + AluY SINE Alu 1 313 0 489 181 45 53 chr5 46868070 46868159 -152761991 - HAL1 LINE L1 -103 2404 2315 1685 166 0 45 chr5 46868159 46868472 -152761678 - AluJo SINE Alu -13 299 1 489 181 45 53 chr5 46868472 46868515 -152761635 - HAL1 LINE L1 -192 2315 2273 1614 152 16 54 chr5 46868516 46868831 -152761319 - AluJo SINE Alu -9 303 1 1177 40 23 17 chr5 46869518 46869695 -152760455 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 507 233 0 0 chr5 46869696 46869846 -152760304 + CT-rich Low_complexity Low_complexity 4 153 0 588 306 50 22 chr5 46870115 46870295 -152759855 + MIR SINE MIR 23 207 -55 2321 100 3 0 chr5 46870295 46870605 -152759545 + AluSp SINE Alu 1 311 -2 209 95 0 24 chr5 46870605 46870647 -152759503 + (TA)n Simple_repeat Simple_repeat 1 41 0 317 244 148 108 chr5 46870770 46871094 -152759056 - MLT1J LTR MaLR -65 446 110 508 158 40 164 chr5 46871202 46871278 -152758872 - MER94 DNA DNA 0 134 85 1950 95 32 14 chr5 46871278 46871561 -152758589 - AluSx SINE Alu -24 288 1 508 158 40 164 chr5 46871561 46871636 -152758514 - MER94 DNA DNA -49 85 2 2194 74 0 0 chr5 46871683 46871988 -152758162 - AluY SINE Alu 0 305 1 1927 130 0 3 chr5 46872232 46872531 -152757619 + AluSg SINE Alu 1 298 -12 2166 81 0 0 chr5 46872532 46872815 -152757335 + AluY SINE Alu 17 299 -12 2191 82 0 51 chr5 46873067 46873383 -152756767 + AluSc SINE Alu 1 300 -9 834 225 0 18 chr5 46873569 46873738 -152756412 - FRAM SINE Alu 0 166 1 2603 141 13 0 chr5 46874639 46875037 -152755113 + MER57A LTR ERV1 1 403 0 1971 92 0 7 chr5 46875133 46875404 -152754746 + AluSq SINE Alu 1 269 -44 428 243 12 35 chr5 46875551 46875720 -152754430 + GA-rich Low_complexity Low_complexity 4 168 0 1892 113 11 7 chr5 46875907 46876181 -152753969 + AluSq SINE Alu 28 302 -11 994 54 78 0 chr5 46876391 46876520 -152753630 + MER85 DNA T2_type 1 139 0 6922 182 55 53 chr5 46876520 46877384 -152752766 + L1MB1 LINE L1 3429 4290 -1878 2271 93 16 10 chr5 46877384 46877695 -152752455 - AluSq SINE Alu 0 313 1 2339 69 14 0 chr5 46877705 46877993 -152752157 - AluSp SINE Alu -21 292 1 6922 182 55 53 chr5 46877993 46878165 -152751985 + L1MB1 LINE L1 4298 4468 -1700 1695 118 118 18 chr5 46878165 46878437 -152751713 + AluSx SINE Alu 1 299 -13 6922 182 55 53 chr5 46878437 46878498 -152751652 + L1MB1 LINE L1 4468 4527 -1641 1134 156 85 31 chr5 46878498 46878536 -152751614 + MER46A DNA MER2_type 1 36 -2695 1949 140 21 0 chr5 46878536 46878822 -152751328 + AluSg SINE Alu 2 293 -17 1134 156 85 31 chr5 46878822 46879007 -152751143 + MER46A DNA MER2_type 36 236 0 6922 182 55 53 chr5 46879007 46879177 -152750973 + L1MB1 LINE L1 4527 4695 -1473 1435 127 110 101 chr5 46879177 46879485 -152750665 - AluY SINE Alu 0 311 1 6922 182 55 53 chr5 46879485 46880945 -152749205 + L1MB1 LINE L1 4695 6166 -2 2127 112 17 0 chr5 46881072 46881366 -152748784 + AluSp SINE Alu 1 299 -14 1716 162 3 30 chr5 46882634 46882937 -152747213 + AluJb SINE Alu 1 295 -17 817 278 43 24 chr5 46882991 46883246 -152746904 + MIR SINE MIR 2 261 -1 2092 122 0 7 chr5 46883407 46883714 -152746436 - AluSx SINE Alu 0 305 1 214 290 97 0 chr5 46883852 46883914 -152746236 + L2 LINE L2 3205 3272 0 807 146 7 15 chr5 46884181 46884318 -152745832 + AluJb SINE Alu 1 136 -176 723 111 43 8 chr5 46884418 46884535 -152745615 - AluSg1 SINE Alu -187 122 2 1264 118 4 72 chr5 46884636 46884873 -152745277 - AluJb SINE Alu -24 288 68 2243 86 9 29 chr5 46884976 46885291 -152744859 - AluSc SINE Alu 0 309 1 1763 221 54 98 chr5 46885497 46885873 -152744277 - L1M4 LINE L1 -5575 967 576 2429 86 0 6 chr5 46885873 46886186 -152743964 - AluY SINE Alu 0 311 1 1763 221 54 98 chr5 46886186 46886203 -152743947 - L1M4 LINE L1 -5966 576 560 1904 128 80 3 chr5 46886203 46886492 -152743658 - AluSq SINE Alu -2 311 1 1763 221 54 98 chr5 46886492 46886689 -152743461 - L1M4 LINE L1 -5982 560 402 209 264 0 0 chr5 46886722 46886775 -152743375 + MIR SINE MIR 184 236 -26 226 292 33 42 chr5 46886783 46886903 -152743247 + L2 LINE L2 2937 3055 -217 2119 118 3 20 chr5 46887332 46887637 -152742513 + AluSx SINE Alu 1 300 -12 659 269 119 13 chr5 46887812 46888039 -152742111 + HsTC2 DNA Tc2 186 436 -1462 2423 58 3 29 chr5 46888268 46888578 -152741572 + AluY SINE Alu 1 302 -9 2081 121 18 0 chr5 46888587 46888867 -152741283 + AluSx SINE Alu 1 285 -27 186 43 0 0 chr5 46888867 46888890 -152741260 + (TA)n Simple_repeat Simple_repeat 2 24 0 1187 236 143 21 chr5 46888902 46889335 -152740815 - L1ME1 LINE L1 -95 6071 5586 1880 127 15 4 chr5 46889360 46889628 -152740522 + AluSq SINE Alu 1 271 -42 1757 152 10 27 chr5 46889676 46889972 -152740178 + AluJb SINE Alu 2 292 -20 725 215 125 5 chr5 46890069 46890269 -152739881 - MER58A DNA MER1_type 0 224 1 483 196 138 20 chr5 46890320 46890494 -152739656 - L1MA10 LINE L1 -2 6332 5983 1995 95 66 0 chr5 46890582 46890856 -152739294 + AluSx SINE Alu 2 293 -19 337 253 27 0 chr5 46890856 46890931 -152739219 + AluS SINE Alu 1 77 -222 2235 204 49 11 chr5 46890931 46891461 -152738689 - L1ME1 LINE L1 -315 5851 5302 1962 231 40 38 chr5 46891475 46891981 -152738169 - LTR40a LTR ERVL -5 514 8 758 207 4 134 chr5 46891991 46892092 -152738058 - HERVL40 LTR ERVL -9 5521 5408 2075 108 52 7 chr5 46892092 46892378 -152737772 + AluSq SINE Alu 1 299 -14 758 207 4 134 chr5 46892378 46892551 -152737599 - HERVL40 LTR ERVL -122 5408 5283 285 309 25 0 chr5 46892549 46892630 -152737520 - HERVL40 LTR ERVL -172 2865 2783 * 279 349 47 41 chr5 46892630 46892892 -152737258 - MER89-int LTR ERV1 -345 6455 6111 1815 145 11 0 chr5 46893011 46893317 -152736833 - AluSx SINE Alu 0 309 1 322 263 105 48 chr5 46893362 46893571 -152736579 - HERVL40 LTR ERVL -327 2710 2490 1938 140 11 0 chr5 46893582 46893885 -152736265 - AluSx SINE Alu 0 306 1 5657 236 70 51 chr5 46894084 46894187 -152735963 - HERVL40 LTR ERVL -693 4678 4578 1846 174 0 10 chr5 46894187 46894492 -152735658 - AluJb SINE Alu -10 302 1 5657 236 70 51 chr5 46894492 46894925 -152735225 - HERVL40 LTR ERVL -793 4578 4155 1943 118 12 59 chr5 46894925 46895246 -152734904 + AluSq SINE Alu 1 306 -7 5657 236 70 51 chr5 46895246 46895715 -152734435 - HERVL40 LTR ERVL -1216 4155 3696 2243 108 0 7 chr5 46895715 46896012 -152734138 + AluSx SINE Alu 5 299 -13 5657 236 70 51 chr5 46896012 46896703 -152733447 - HERVL40 LTR ERVL -1675 3696 2044 3218 241 49 31 chr5 46896742 46897616 -152732534 - HERVL40 LTR ERVL -2595 2935 2046 2662 260 60 59 chr5 46897754 46898337 -152731813 - HERVL40 LTR ERVL -4073 1457 876 867 114 0 79 chr5 46898337 46898477 -152731673 + FLAM_C SINE Alu 1 129 -4 2662 260 60 59 chr5 46898477 46899209 -152730941 - HERVL40 LTR ERVL -4654 876 174 1427 216 50 89 chr5 46899211 46899558 -152730592 - MLT1C LTR MaLR -4 463 104 2008 113 14 0 chr5 46899558 46899842 -152730308 - AluSp SINE Alu -22 291 4 1427 216 50 89 chr5 46899842 46899857 -152730293 - MLT1C LTR MaLR -363 104 90 2472 84 7 0 chr5 46899857 46900167 -152729983 - AluSp SINE Alu -1 312 1 1427 216 50 89 chr5 46900167 46900285 -152729865 - MLT1C LTR MaLR -377 90 1 701 251 6 24 chr5 46900285 46900452 -152729698 - HERVL40 LTR ERVL -5350 180 17 1554 254 133 13 chr5 46900461 46900921 -152729229 - LTR40a LTR ERVL -4 515 1 1431 203 99 85 chr5 46900941 46900989 -152729161 - L1M4 LINE L1 -852 5294 5248 2352 99 0 3 chr5 46900989 46901303 -152728847 + AluSq SINE Alu 1 313 0 1431 203 99 85 chr5 46901303 46901470 -152728680 - L1M4 LINE L1 -898 5248 5085 2535 73 0 6 chr5 46901470 46901783 -152728367 + AluY SINE Alu 1 311 0 1431 203 99 85 chr5 46901783 46901798 -152728352 - L1M4 LINE L1 -1061 5085 5072 1690 185 11 0 chr5 46901798 46902068 -152728082 + AluJb SINE Alu 1 273 -39 1431 203 99 85 chr5 46902068 46902256 -152727894 - L1M4 LINE L1 -1074 5072 4888 2346 96 10 0 chr5 46902256 46902557 -152727593 - AluSp SINE Alu -9 304 1 1431 203 99 85 chr5 46902557 46902722 -152727428 - L1M4 LINE L1 -1258 4888 4700 1219 93 4 93 chr5 46904005 46904263 -152725887 + AluSg/x SINE Alu 70 304 -8 728 223 211 59 chr5 46904271 46904612 -152725538 + L2 LINE L2 1799 2191 -1123 725 217 45 0 chr5 46904642 46904799 -152725351 - LTR16C LTR ERVL -1 490 327 732 289 55 17 chr5 46904838 46905073 -152725077 - LTR16C LTR ERVL -244 247 4 1529 229 72 7 chr5 46905084 46905499 -152724651 + L2 LINE L2 2313 2754 -560 325 301 85 2 chr5 46905572 46905810 -152724340 + L2 LINE L2 2768 3069 -244 1459 137 0 0 chr5 46905846 46906095 -152724055 - AluSc SINE Alu 0 323 75 1912 146 36 0 chr5 46906555 46906856 -152723294 + AluJb SINE Alu 1 312 0 444 281 96 22 chr5 46907040 46907218 -152722932 + MIR SINE MIR 61 251 -11 766 186 8 8 chr5 46907304 46907433 -152722717 + FLAM_C SINE Alu 3 131 -12 2317 75 0 0 chr5 46907538 46907843 -152722307 - AluY SINE Alu 0 305 1 1657 138 85 14 chr5 46908070 46908353 -152721797 + AluJo SINE Alu 2 304 -8 25 31 0 0 chr5 46909756 46909788 -152720362 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr5 46909936 46909957 -152720193 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 2374 104 3 0 chr5 46910155 46910464 -152719686 + AluSg SINE Alu 1 310 0 2108 128 13 7 chr5 46911442 46911747 -152718403 - AluSx SINE Alu -5 307 1 387 105 0 0 chr5 46911990 46912047 -152718103 + (GGGGA)n Simple_repeat Simple_repeat 4 60 0 296 250 152 0 chr5 46912193 46912285 -152717865 - L2 LINE L2 0 3313 3208 2262 136 149 102 chr5 46912520 46912721 -152717429 - LTR29 LTR ERV1 -5 617 427 2166 135 0 3 chr5 46912721 46913032 -152717118 + AluSx SINE Alu 1 310 -2 2262 136 149 102 chr5 46913032 46913419 -152716731 - LTR29 LTR ERV1 -195 427 1 295 336 67 57 chr5 46913462 46913745 -152716405 - L2 LINE L2 -424 2890 2605 408 50 0 81 chr5 46914980 46915079 -152715071 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 984 158 16 22 chr5 46915121 46915305 -152714845 - AluSp SINE Alu 0 313 131 2145 66 7 35 chr5 46915308 46915639 -152714511 - AluSg SINE Alu 0 323 1 1227 204 58 0 chr5 46916481 46916706 -152713444 - MER8 DNA MER2_type 0 239 2 1496 126 0 0 chr5 46917327 46917526 -152712624 - AluJb SINE Alu -27 285 87 751 167 83 7 chr5 46917582 46917726 -152712424 - MLT1B LTR MaLR -46 344 190 7985 151 50 21 chr5 46917747 46918729 -152711421 - Tigger1 DNA MER2_type -944 1474 522 2377 85 3 0 chr5 46918729 46919023 -152711127 - AluY SINE Alu -16 295 1 2263 72 0 17 chr5 46919030 46919320 -152710830 - AluSg1 SINE Alu -22 287 3 7985 151 50 21 chr5 46919320 46919757 -152710393 - Tigger1 DNA MER2_type -1901 517 5 2607 134 47 0 chr5 46920216 46920625 -152709525 - MSTC LTR MaLR 0 428 1 261 254 142 16 chr5 46921457 46921635 -152708515 + MIR SINE MIR 19 216 -46 664 255 104 62 chr5 46921972 46922152 -152707998 - L1MC/D LINE L1 -2000 5808 5612 1955 103 0 4 chr5 46922152 46922413 -152707737 - AluSg SINE Alu -10 300 41 664 255 104 62 chr5 46922413 46922491 -152707659 - L1MC/D LINE L1 -2196 5612 5539 2213 105 3 10 chr5 46923004 46923300 -152706850 - AluSg SINE Alu -15 295 2 2178 102 0 29 chr5 46923302 46923615 -152706535 - AluSx SINE Alu -8 304 1 395 152 15 15 chr5 46923802 46923868 -152706282 + AluSq/x SINE Alu 45 110 -193 527 87 0 0 chr5 46923868 46923937 -152706213 + AluSp/q SINE Alu 226 294 -19 2037 137 10 0 chr5 46923987 46924287 -152705863 - AluSx SINE Alu -9 303 1 662 131 90 49 chr5 46924292 46924414 -152705736 - FLAM_C SINE Alu -15 128 2 2247 95 14 3 chr5 46924705 46925000 -152705150 + AluSx SINE Alu 1 298 -14 199 365 0 0 chr5 46925278 46925341 -152704809 + L2 LINE L2 3192 3254 -18 25 0 0 0 chr5 46925485 46925510 -152704640 + AT_rich Low_complexity Low_complexity 1 25 0 2298 102 0 0 chr5 46926313 46926607 -152703543 + AluSq SINE Alu 1 294 -19 180 0 0 0 chr5 46928086 46928106 -152702044 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr5 46928396 46928424 -152701726 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 46929209 46929230 -152700920 + AT_rich Low_complexity Low_complexity 1 21 0 1553 231 138 81 chr5 46929898 46930594 -152699556 - MER21B LTR ERV1 -109 754 18 2160 114 7 0 chr5 46930594 46930893 -152699257 - AluSp SINE Alu -12 301 1 2102 107 3 7 chr5 46931051 46931376 -152698774 + AluSg SINE Alu 1 310 0 1396 181 57 7 chr5 46932187 46932469 -152697681 - AluJo SINE Alu -16 296 1 316 169 169 0 chr5 46932958 46933023 -152697127 - MER5A DNA MER1_type -1 188 113 2811 96 39 0 chr5 46933023 46933386 -152696764 - MER51B LTR ERV1 0 377 1 10974 127 83 46 chr5 46933388 46933659 -152696491 - MER51B-int LTR ERV1 -1 7815 7555 2458 84 0 7 chr5 46933659 46933968 -152696182 + AluSq SINE Alu 1 307 -6 10974 127 83 46 chr5 46933968 46934040 -152696110 - MER51B-int LTR ERV1 -261 7555 7487 2498 69 0 7 chr5 46934040 46934345 -152695805 + AluSg SINE Alu 1 303 -7 10974 127 83 46 chr5 46934345 46934661 -152695489 - MER51B-int LTR ERV1 -329 7487 7184 2304 99 0 10 chr5 46934661 46934975 -152695175 - AluSx SINE Alu -1 311 1 10974 127 83 46 chr5 46934975 46935238 -152694912 - MER51B-int LTR ERV1 -632 7184 6932 2358 66 0 44 chr5 46935238 46935557 -152694593 - AluY SINE Alu -6 305 1 10974 127 83 46 chr5 46935557 46935714 -152694436 - MER51B-int LTR ERV1 -884 6932 6782 2077 102 6 38 chr5 46935714 46936027 -152694123 + AluSq SINE Alu 1 303 -10 10974 127 83 46 chr5 46936027 46936255 -152693895 - MER51B-int LTR ERV1 -1034 6782 6564 2253 102 0 16 chr5 46936255 46936559 -152693591 - AluSx SINE Alu -13 299 1 10974 127 83 46 chr5 46936559 46937098 -152693052 - MER51B-int LTR ERV1 -1252 6564 6046 2179 67 42 3 chr5 46937098 46937382 -152692768 + AluY SINE Alu 1 295 -16 10974 127 83 46 chr5 46937382 46937750 -152692400 - MER51B-int LTR ERV1 -1770 6046 5693 2217 130 0 0 chr5 46937750 46938051 -152692099 - AluSg SINE Alu -9 301 1 10974 127 83 46 chr5 46938051 46938163 -152691987 - MER51B-int LTR ERV1 -2123 5693 5250 750 50 40 0 chr5 46938164 46938265 -152691885 - MER51-int LTR ERV1 -2534 5003 4899 1214 93 33 47 chr5 46938271 46938343 -152691807 - MER51-int LTR ERV1 -4798 3018 2947 2211 91 13 16 chr5 46938343 46938650 -152691500 + AluSp SINE Alu 1 306 -7 1214 93 33 47 chr5 46938650 46938791 -152691359 - MER51-int LTR ERV1 -4869 2947 2808 3603 98 3 36 chr5 46938805 46939038 -152691112 - MER51-int LTR ERV1 -5439 2377 2138 2288 78 0 10 chr5 46939038 46939347 -152690803 - AluY SINE Alu -5 306 1 3603 98 3 36 chr5 46939347 46939587 -152690563 - MER51-int LTR ERV1 -5678 2138 1926 2404 70 3 22 chr5 46939587 46939901 -152690249 - AluY SINE Alu -3 308 1 3603 98 3 36 chr5 46939901 46940029 -152690121 - MER51-int LTR ERV1 -5890 1926 1795 1993 94 45 4 chr5 46940029 46940324 -152689826 - AluSc SINE Alu 0 306 1 1046 88 0 22 chr5 46940324 46940460 -152689690 - AluSc SINE Alu -176 133 1 672 150 80 25 chr5 46940470 46940657 -152689493 - MER4A LTR ERV1 -133 531 276 357 253 20 30 chr5 46940660 46940759 -152689391 - MER4A LTR ERV1 -566 98 1 1251 107 5 25 chr5 46940759 46940955 -152689195 - LOR1-int LTR ERV1 -6901 1219 1028 2848 72 8 11 chr5 46940955 46941331 -152688819 + L1PA5 LINE L1 5779 6153 -1 1112 81 7 7 chr5 46941332 46941481 -152688669 + AluY SINE Alu 1 149 -162 874 108 102 13 chr5 46941496 46941653 -152688497 + AluY SINE Alu 32 202 -109 696 45 18 18 chr5 46942189 46942299 -152687851 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 486 46 0 0 chr5 46942306 46942371 -152687779 + (TTCTG)n Simple_repeat Simple_repeat 2 66 0 1851 139 4 14 chr5 46942375 46942520 -152687630 - AluSx SINE Alu -35 277 135 2153 104 3 7 chr5 46942520 46942819 -152687331 - AluSx SINE Alu -14 298 1 1851 139 4 14 chr5 46942819 46942953 -152687197 - AluSx SINE Alu -177 135 1 778 145 73 0 chr5 46942953 46943133 -152687017 - FLAM_C SINE Alu 0 189 1 2645 45 7 3 chr5 46943563 46943872 -152686278 + AluY SINE Alu 2 311 0 21 0 0 0 chr5 46943935 46943956 -152686194 + AT_rich Low_complexity Low_complexity 1 21 0 1872 156 7 0 chr5 46944466 46944761 -152685389 - AluSx SINE Alu -15 297 1 309 353 8 0 chr5 46945595 46945717 -152684433 + MIR3 SINE MIR 86 208 0 3062 140 24 8 chr5 46945985 46946485 -152683665 - L1MB8 LINE L1 -2 6176 5669 1296 156 69 0 chr5 46946505 46946736 -152683414 - L1MB8 LINE L1 -615 5569 5323 2273 100 10 0 chr5 46946736 46947036 -152683114 - AluSx SINE Alu -7 305 3 2230 105 3 0 chr5 46947043 46947337 -152682813 - AluSx SINE Alu -17 295 1 1913 181 43 19 chr5 46947363 46947734 -152682416 - MSTB LTR MaLR 0 426 47 604 194 47 0 chr5 46947736 46947865 -152682285 - FRAM SINE Alu -2 174 40 2276 121 12 3 chr5 46947898 46948230 -152681920 + THE1C LTR MaLR 1 335 -40 453 216 78 20 chr5 46948248 46948350 -152681800 + AluSg/x SINE Alu 76 183 -129 377 65 0 0 chr5 46948358 46948404 -152681746 + THE1C LTR MaLR 330 375 0 897 179 0 19 chr5 46948404 46948566 -152681584 - AluJo SINE Alu -153 159 1 426 73 0 0 chr5 46948566 46948621 -152681529 - MSTB LTR MaLR -371 55 1 1370 215 13 62 chr5 46948636 46948754 -152681396 - L1MB8 LINE L1 -851 5295 5173 2285 89 0 7 chr5 46948754 46949046 -152681104 - AluSg SINE Alu -20 290 1 1370 215 13 62 chr5 46949046 46949313 -152680837 - L1MB8 LINE L1 -973 5173 4929 2042 115 45 0 chr5 46949315 46949602 -152680548 - AluSx SINE Alu -12 300 1 292 308 58 6 chr5 46949632 46949788 -152680362 - L1M4c LINE L1 -4165 2219 2056 230 270 63 45 chr5 46949949 46950060 -152680090 + L2 LINE L2 3199 3311 -2 1820 137 95 0 chr5 46950214 46950499 -152679651 + AluSx SINE Alu 1 312 0 2467 143 21 0 chr5 46950511 46950895 -152679255 - MER57A LTR ERV1 -4 399 8 410 235 143 0 chr5 46950906 46951004 -152679146 + L2 LINE L2 3160 3271 -1 1811 159 6 25 chr5 46951467 46951782 -152678368 + AluJo SINE Alu 1 309 -3 2366 86 0 3 chr5 46951880 46952181 -152677969 + AluSg SINE Alu 2 301 -9 520 247 119 58 chr5 46952216 46952459 -152677691 + MIR SINE MIR 5 262 0 896 104 0 15 chr5 46953088 46953223 -152676927 - FLAM_C SINE Alu 0 133 1 866 66 16 16 chr5 46953356 46953477 -152676673 + AluSp/q SINE Alu 179 299 -14 1794 123 39 54 chr5 46953596 46953715 -152676435 - LTR56 LTR ERV1 0 445 326 2135 125 0 0 chr5 46953715 46954012 -152676138 - AluSg1 SINE Alu -12 297 1 1794 123 39 54 chr5 46954012 46954224 -152675926 - LTR56 LTR ERV1 -119 326 119 447 133 0 0 chr5 46954230 46954305 -152675845 + Alu SINE Alu 235 309 -3 573 129 89 20 chr5 46954308 46954409 -152675741 - LTR56 LTR ERV1 -329 116 9 1777 249 95 55 chr5 46954825 46955581 -152674569 - L2 LINE L2 -81 3191 2349 228 246 9 70 chr5 46956026 46956091 -152674059 + MIR SINE MIR 141 198 -64 2307 94 7 0 chr5 46956091 46956399 -152673751 + AluSx SINE Alu 3 312 0 228 246 9 70 chr5 46956399 46956447 -152673703 + MIR SINE MIR 198 247 -15 26 0 0 0 chr5 46956701 46956727 -152673423 + AT_rich Low_complexity Low_complexity 1 26 0 489 300 35 0 chr5 46956860 46957030 -152673120 - MIR3 SINE MIR -1 207 32 2459 65 0 0 chr5 46957163 46957456 -152672694 - AluY SINE Alu -18 293 1 1657 175 3 24 chr5 46957555 46957846 -152672304 + AluJb SINE Alu 3 287 -25 2198 108 3 10 chr5 46958110 46958416 -152671734 + AluSq SINE Alu 1 304 -9 2233 105 10 22 chr5 46958628 46958942 -152671208 - AluSg SINE Alu 0 310 1 1229 266 63 37 chr5 46959133 46959561 -152670589 - MLT1J LTR MaLR -19 492 50 670 231 40 17 chr5 46959561 46959734 -152670416 + MER5B DNA MER1_type 2 178 0 1229 266 63 37 chr5 46959734 46959768 -152670382 - MLT1J LTR MaLR -461 50 18 903 239 0 55 chr5 46960046 46960339 -152669811 + AluJo SINE Alu 1 277 -35 23 54 0 0 chr5 46960619 46960656 -152669494 + AT_rich Low_complexity Low_complexity 1 37 0 188 311 49 16 chr5 46963196 46963257 -152666893 + MIR SINE MIR 117 179 -83 354 23 0 0 chr5 46963262 46963305 -152666845 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 319 263 8 38 chr5 46963397 46963530 -152666620 - L1MC5 LINE L1 -33 7928 7800 685 160 0 0 chr5 46963535 46963635 -152666515 + AluS SINE Alu 2 101 -211 2139 129 7 0 chr5 46963659 46963962 -152666188 - AluSx SINE Alu -7 305 1 1735 214 28 56 chr5 46964949 46965462 -152664688 - L1ME3A LINE L1 -4 6166 5667 1724 198 0 3 chr5 46965462 46965760 -152664390 - AluJo SINE Alu -15 297 1 1735 214 28 56 chr5 46965760 46965784 -152664366 - L1ME3A LINE L1 -503 5667 5644 5835 127 24 27 chr5 46965797 46967105 -152663045 - L1PB3 LINE L1 -3 6151 4844 485 214 27 0 chr5 46967127 46967239 -152662911 - L1PB3 LINE L1 -1878 4268 4154 2475 70 3 0 chr5 46967526 46967826 -152662324 - AluY SINE Alu -10 301 1 209 194 45 0 chr5 46967897 46967964 -152662186 + (TA)n Simple_repeat Simple_repeat 1 70 0 451 330 34 4 chr5 46967972 46968208 -152661942 - L1ME LINE L1 -303 5818 5576 555 310 140 0 chr5 46968546 46968775 -152661375 + MIR SINE MIR 2 262 0 674 246 52 11 chr5 46968784 46969121 -152661029 + MER113 DNA MER1_type? 106 521 0 245 231 154 0 chr5 46969123 46969188 -152660962 - MIR3 SINE MIR -45 163 89 234 258 68 45 chr5 46970339 46970471 -152659679 - L1ME LINE L1 -346 5775 5641 606 237 8 23 chr5 46970577 46970708 -152659442 + FLAM_A SINE Alu 1 129 -4 2200 104 3 14 chr5 46971484 46971781 -152658369 + AluSg SINE Alu 1 294 -16 1041 157 3 141 chr5 46972326 46972625 -152657525 - L1 LINE L1 -2056 4090 3833 22776 55 3 12 chr5 46972651 46976273 -152653877 - L1PA5 LINE L1 -3 6151 2555 357 298 73 84 chr5 46976643 46976918 -152653232 - HAL1 LINE L1 -2111 396 125 2242 93 7 10 chr5 46976919 46977221 -152652929 - AluSq SINE Alu -9 304 4 1849 96 8 8 chr5 46977222 46977472 -152652678 - AluSq SINE Alu -22 291 42 1842 164 16 19 chr5 46977748 46978060 -152652090 - AluJb SINE Alu -1 311 1 2092 107 31 7 chr5 46978231 46978521 -152651629 - AluSx SINE Alu -15 297 1 927 265 88 23 chr5 46978637 46978988 -152651162 - L1ME LINE L1 -2133 5675 5302 2144 100 3 35 chr5 46979002 46979321 -152650829 - AluSc SINE Alu 0 309 1 21 100 0 0 chr5 46979330 46979400 -152650750 + AT_rich Low_complexity Low_complexity 1 70 0 2259 112 0 0 chr5 46980489 46980784 -152649366 - AluSq SINE Alu -17 296 2 368 217 0 0 chr5 46981227 46981287 -152648863 + AluS SINE Alu 1 60 -248 838 186 0 18 chr5 46981345 46981512 -152648638 - AluJb SINE Alu 0 312 149 13416 111 14 24 chr5 47032938 47034988 -152595162 - L1P LINE L1 -3898 2248 220 6241 50 3 1 chr5 47035088 47036091 -152594059 + L1P2 LINE L1 4597 5600 -555 608 37 12 0 chr5 47036091 47036173 -152593977 + L1PA2 LINE L1 6073 6155 0 * 7655 35 0 0 chr5 47036171 47037175 -152592975 + L1PA4 LINE L1 5152 6155 0 760 216 28 38 chr5 47038598 47038811 -152591339 + MER112 DNA MER1_type 1 211 -49 1914 158 6 19 chr5 47039424 47039740 -152590410 - AluJo SINE Alu 0 312 1 338 171 0 29 chr5 47040319 47040389 -152589761 + LTR33A LTR ERVL 439 506 -17 261 0 0 0 chr5 47040545 47040574 -152589576 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2511 70 0 3 chr5 47040579 47040880 -152589270 - AluY SINE Alu -11 300 1 23016 59 5 1 chr5 47041053 47044446 -152585704 + L1PA6 LINE L1 2434 5837 -317 2226 117 3 0 chr5 47044579 47044877 -152585273 - AluSx SINE Alu -13 299 1 243 199 88 88 chr5 47045668 47045804 -152584346 - MIR SINE MIR -7 255 120 609 298 97 26 chr5 47047462 47047801 -152582349 - L2 LINE L2 0 3313 2951 366 222 111 30 chr5 47047813 47047948 -152582202 - LTR16C LTR ERVL -13 478 333 661 118 18 0 chr5 47048010 47048120 -152582030 + L1 LINE L1 3645 3756 -2390 228 217 0 0 chr5 47048302 47048348 -152581802 + L2 LINE L2 3262 3307 -6 283 222 0 0 chr5 47048487 47048541 -152581609 + MER96 DNA MER1_type? 16 69 -106 229 288 55 25 chr5 47049419 47049582 -152580568 - L1ME4a LINE L1 -4 6117 5950 567 318 41 0 chr5 47049752 47049947 -152580203 - L1ME4a LINE L1 -426 5695 5493 2123 149 59 55 chr5 47050223 47050274 -152579876 - MSTB LTR MaLR 0 426 377 2147 105 24 3 chr5 47050274 47050570 -152579580 - AluSg SINE Alu -8 302 1 2123 149 59 55 chr5 47050570 47050940 -152579210 - MSTB LTR MaLR -49 377 3 201 176 0 0 chr5 47052122 47052156 -152577994 + CT-rich Low_complexity Low_complexity 1 34 0 333 0 0 0 chr5 47052157 47052194 -152577956 + (TG)n Simple_repeat Simple_repeat 1 37 0 252 0 0 0 chr5 47052193 47052221 -152577929 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 444 115 21 21 chr5 47052320 47052416 -152577734 + CT-rich Low_complexity Low_complexity 4 99 0 213 232 0 80 chr5 47052699 47052824 -152577326 + A-rich Low_complexity Low_complexity 5 119 0 236 274 0 23 chr5 47052884 47053101 -152577049 + A-rich Low_complexity Low_complexity 1 211 0 297 186 59 69 chr5 47053996 47054098 -152576052 + MIR SINE MIR 112 212 -50 1887 154 0 13 chr5 47054963 47055262 -152574888 - AluJb SINE Alu -15 297 3 212 228 35 0 chr5 47055973 47056030 -152574120 + L2 LINE L2 2995 3053 -219 24 0 0 0 chr5 47056352 47056376 -152573774 + AT_rich Low_complexity Low_complexity 1 24 0 378 135 0 0 chr5 47056376 47056428 -152573722 - MER66B LTR ERV1 -140 346 295 2167 106 23 17 chr5 47056767 47057068 -152573082 + AluSx SINE Alu 1 303 -9 2188 114 0 23 chr5 47058480 47058788 -152571362 + AluSg SINE Alu 1 301 -9 814 263 47 24 chr5 47059056 47059311 -152570839 - Charlie8 DNA MER1_type -2136 281 21 623 247 149 0 chr5 47059406 47059600 -152570550 - LTR33 LTR ERVL -298 223 1 2780 198 51 2 chr5 47059868 47060458 -152569692 + L1MD2 LINE L1 5702 6320 -39 269 162 99 54 chr5 47060458 47060569 -152569581 - Charlie7 DNA MER1_type -38 2574 2459 420 226 0 12 chr5 47060579 47060663 -152569487 - Charlie7 DNA MER1_type -2512 100 18 270 231 13 26 chr5 47060899 47060977 -152569173 - L2 LINE L2 -560 2754 2678 1578 282 89 17 chr5 47061155 47061751 -152568399 + L2 LINE L2 1033 1671 -1643 2439 191 62 25 chr5 47061775 47062073 -152568077 + L1PBa LINE L1 2443 2729 -4133 2564 62 0 7 chr5 47062073 47062381 -152567769 + AluY SINE Alu 1 306 -5 2439 191 62 25 chr5 47062381 47062657 -152567493 + L1PBa LINE L1 2729 3035 -3827 2184 109 6 10 chr5 47062657 47062969 -152567181 - AluSq SINE Alu 0 313 3 2439 191 62 25 chr5 47062969 47063054 -152567096 + L1PBa LINE L1 3035 3115 -3747 3437 125 22 31 chr5 47063054 47063640 -152566510 + LTR8A LTR ERV1 1 581 -146 1678 106 35 0 chr5 47064095 47064322 -152565828 - AluSg/x SINE Alu -8 302 68 930 292 57 21 chr5 47065162 47065587 -152564563 - L2 LINE L2 -8 3305 2866 692 158 38 45 chr5 47065727 47065860 -152564290 + FLAM_C SINE Alu 1 132 -1 466 239 221 14 chr5 47066027 47066240 -152563910 - MIR SINE MIR 0 262 6 2278 95 7 7 chr5 47066531 47066825 -152563325 + AluSq SINE Alu 1 294 -19 28 0 0 0 chr5 47066963 47066991 -152563159 + AT_rich Low_complexity Low_complexity 1 28 0 30651 63 114 1 chr5 47067259 47071422 -152558728 + L1P LINE L1 2 4634 -1512 956 312 86 21 chr5 47071573 47072096 -152558054 - ERVL LTR ERVL -830 4934 4378 375 348 13 7 chr5 47072068 47072223 -152557927 - ERVL LTR ERVL -2258 3506 3351 * 1947 306 81 19 chr5 47072374 47073348 -152556802 - ERVL LTR ERVL -1911 3085 2009 532 315 77 44 chr5 47073418 47073780 -152556370 - ERVL LTR ERVL -3828 1826 1453 5520 114 65 50 chr5 47073907 47074363 -152555787 - L1MA4A LINE L1 -2 6301 5853 2301 97 3 3 chr5 47074363 47074673 -152555477 - AluSx SINE Alu -2 310 1 5520 114 65 50 chr5 47074673 47075214 -152554936 - L1MA4A LINE L1 -450 5853 5289 270 0 0 0 chr5 47075214 47075244 -152554906 + (TTA)n Simple_repeat Simple_repeat 2 31 0 5520 114 65 50 chr5 47075244 47075308 -152554842 - L1MA4A LINE L1 -1014 5289 5227 2315 84 27 0 chr5 47075589 47075886 -152554264 - AluSp SINE Alu -8 305 1 1815 200 80 37 chr5 47076660 47077125 -152553025 - MLT1D LTR MaLR 0 505 21 494 257 57 7 chr5 47077232 47077372 -152552778 - LTR16C LTR ERVL -1 490 344 213 280 89 33 chr5 47077752 47077903 -152552247 - L2 LINE L2 -334 2938 2782 371 258 0 11 chr5 47078641 47078730 -152551420 - L3 LINE CR1 -7 1570 1483 190 281 78 62 chr5 47078962 47079090 -152551060 + L2 LINE L2 3184 3313 0 412 302 69 13 chr5 47081412 47081571 -152548579 + MIR SINE MIR 47 214 -48 2411 98 0 0 chr5 47081781 47082087 -152548063 - AluSc SINE Alu -3 306 1 832 169 0 15 chr5 47083055 47083191 -152546959 - AluJo SINE Alu -178 134 1 2176 118 7 3 chr5 47083514 47083811 -152546339 - AluSx SINE Alu -12 300 3 261 290 28 37 chr5 47085361 47085468 -152544682 + MIR3 SINE MIR 88 193 -15 680 236 75 55 chr5 47085901 47086155 -152543995 - MER112 DNA MER1_type 0 260 2 334 275 22 107 chr5 47087245 47087356 -152542794 + MIR SINE MIR 85 177 -85 2322 92 13 3 chr5 47087356 47087661 -152542489 + AluSq SINE Alu 1 308 -5 334 275 22 107 chr5 47087661 47087727 -152542423 + MIR SINE MIR 177 247 -15 200 376 21 21 chr5 47090140 47090233 -152539917 + L2 LINE L2 3150 3242 -30 1666 184 161 20 chr5 47091113 47091602 -152538548 - LTR10A LTR ERV1 0 609 1 16242 224 11 29 chr5 47091602 47096729 -152533421 - LTR10A-int LTR ERV1 0 6649 2762 1506 209 26 64 chr5 47096729 47097197 -152532953 - LTR7 LTR ERV1 0 450 1 22 88 0 0 chr5 47097205 47097262 -152532888 + AT_rich Low_complexity Low_complexity 1 57 0 2618 21 0 0 chr5 47097342 47097625 -152532525 + L1PA4 LINE L1 5870 6152 -3 1012 198 0 5 chr5 47097672 47097874 -152532276 - HERVH LTR ERV1 -154 7559 7359 431 169 28 34 chr5 47098024 47098202 -152531948 + CT-rich Low_complexity Low_complexity 4 180 0 300 173 11 73 chr5 47098237 47098428 -152531722 + CT-rich Low_complexity Low_complexity 2 180 0 1949 116 49 0 chr5 47098825 47099109 -152531041 - AluSx SINE Alu -14 298 1 1088 283 54 71 chr5 47099173 47099707 -152530443 + LTR67 LTR ERVL 2 526 -31 1985 127 3 3 chr5 47101002 47101309 -152528841 + AluSx SINE Alu 1 307 0 1665 212 182 46 chr5 47101372 47102041 -152528109 - LTR41 LTR ERVL -6 767 8 386 314 97 16 chr5 47102289 47102474 -152527676 - HAL1 LINE L1 -2307 200 1 1391 227 38 48 chr5 47102700 47103097 -152527053 - MLT2C1 LTR ERVL -4 393 1 14837 61 17 7 chr5 47103847 47105841 -152524309 - L1P LINE L1 -1010 5136 3122 30 27 0 0 chr5 47106562 47106599 -152523551 + AT_rich Low_complexity Low_complexity 1 37 0 470 320 47 79 chr5 47107924 47108330 -152521820 + L2 LINE L2 2877 3269 -3 1645 162 3 114 chr5 47108750 47109083 -152521067 + AluJo SINE Alu 1 296 -6 3225 171 33 3 chr5 47109225 47109794 -152520356 - L1MC3 LINE L1 0 7785 7200 233 242 32 16 chr5 47109796 47109858 -152520292 - MLT1F1 LTR MaLR -434 133 71 881 179 22 85 chr5 47109873 47110050 -152520100 - AluJo SINE Alu -18 294 132 2056 97 23 48 chr5 47110050 47110360 -152519790 - AluSq SINE Alu -11 302 1 881 179 22 85 chr5 47110360 47110406 -152519744 - AluJo SINE Alu -180 132 85 612 256 70 42 chr5 47110616 47111056 -152519094 - MLT1H LTR MaLR -1 548 23 1484 151 37 9 chr5 47111880 47112317 -152517833 - LTR54 LTR ERV1 0 510 1 195 184 53 0 chr5 47112352 47112390 -152517760 - L2 LINE L2 -16 3256 3217 22 0 0 0 chr5 47112419 47112441 -152517709 + AT_rich Low_complexity Low_complexity 1 22 0 2178 168 40 175 chr5 47112535 47112825 -152517325 + LTR8A LTR ERV1 34 361 -366 3380 135 16 6 chr5 47112825 47113329 -152516821 - MER9 LTR ERVK -2 509 1 2178 168 40 175 chr5 47113329 47113840 -152516310 + LTR8A LTR ERV1 361 727 0 22 56 0 0 chr5 47113926 47113962 -152516188 + AT_rich Low_complexity Low_complexity 1 36 0 2376 108 46 8 chr5 47113969 47114338 -152515812 - L1PA13 LINE L1 -5 6158 5776 6201 150 26 31 chr5 47114344 47114511 -152515639 - L1PA13 LINE L1 -740 5428 5262 3934 95 54 2 chr5 47114511 47115048 -152515102 - L1PA11 LINE L1 -2 6172 5608 6201 150 26 31 chr5 47115048 47116121 -152514029 - L1PA13 LINE L1 -906 5262 4207 24 32 0 0 chr5 47116140 47116171 -152513979 + AT_rich Low_complexity Low_complexity 1 31 0 381 295 38 0 chr5 47116963 47117068 -152513082 - L2 LINE L2 -15 3298 3190 443 77 15 0 chr5 47117802 47117867 -152512283 - MER41B LTR ERV1 -87 548 483 218 192 19 0 chr5 47117994 47118046 -152512104 + (TG)n Simple_repeat Simple_repeat 2 54 0 591 149 28 0 chr5 47118081 47118188 -152511962 + L1MA6 LINE L1 6190 6299 -1 11813 105 56 63 chr5 47118303 47118693 -152511457 - L1P3 LINE L1 -3550 2911 2520 2142 135 0 0 chr5 47118693 47118989 -152511161 - AluSc SINE Alu -11 298 3 11813 105 56 63 chr5 47118989 47121349 -152508801 - L1P3 LINE L1 -3941 2520 36 1213 144 5 0 chr5 47121329 47121517 -152508633 - L1P3 LINE L1 -6271 190 2 * 391 319 57 32 chr5 47121718 47121875 -152508275 + MIR SINE MIR 27 187 -75 720 260 41 37 chr5 47121982 47122224 -152507926 + MLT1J LTR MaLR 1 243 -268 1977 154 172 27 chr5 47122242 47122650 -152507500 + MLT1C LTR MaLR 1 467 0 312 91 0 0 chr5 47122702 47122746 -152507404 + (GA)n Simple_repeat Simple_repeat 2 45 0 756 218 32 26 chr5 47122746 47122955 -152507195 - MLT1E LTR MaLR -355 212 3 2019 119 13 22 chr5 47123098 47123409 -152506741 - AluSx SINE Alu -4 308 1 841 230 100 81 chr5 47123434 47123932 -152506218 + MLT1H1 LTR MaLR 1 547 -8 2153 130 3 0 chr5 47124394 47124723 -152505427 - AluSq SINE Alu 0 330 1 748 236 134 0 chr5 47124772 47124988 -152505162 - L1ME3A LINE L1 -11 6159 5915 2370 191 93 8 chr5 47125007 47125493 -152504657 + MLT1F LTR MaLR 9 535 -7 2293 168 61 7 chr5 47125493 47125903 -152504247 - MSTB1 LTR MaLR 0 432 1 994 208 41 143 chr5 47125917 47126038 -152504112 - L1ME3A LINE L1 -270 5900 5768 2100 151 0 0 chr5 47126038 47126349 -152503801 - AluSx SINE Alu -1 311 1 994 208 41 143 chr5 47126349 47126482 -152503668 - L1ME3A LINE L1 -402 5768 5711 2160 120 0 7 chr5 47126482 47126781 -152503369 - AluSx SINE Alu -15 297 1 994 208 41 143 chr5 47126781 47126987 -152503163 - L1ME3A LINE L1 -459 5711 5486 2188 89 7 0 chr5 47126998 47127278 -152502872 - AluSp SINE Alu -29 284 3 278 170 21 0 chr5 47127839 47127886 -152502264 - L2 LINE L2 -4 3309 3262 2484 83 0 0 chr5 47128181 47128481 -152501669 + AluSg SINE Alu 1 300 -10 2193 117 0 3 chr5 47128669 47128969 -152501181 - AluSg SINE Alu -11 299 1 556 29 0 0 chr5 47128999 47129068 -152501082 + AluY SINE Alu 238 306 -4 243 0 0 0 chr5 47129139 47129166 -152500984 + (A)n Simple_repeat Simple_repeat 1 27 0 449 98 0 0 chr5 47129391 47129452 -152500698 + Alu SINE Alu 2 62 -251 * 636 116 0 12 chr5 47129449 47129535 -152500615 + AluSg/x SINE Alu 107 191 -121 1459 92 0 5 chr5 47129538 47129722 -152500428 + AluSp SINE Alu 107 289 -24 741 117 25 17 chr5 47129726 47129846 -152500304 - MLT1E3 LTR MaLR -425 199 79 963 144 144 59 chr5 47129945 47130147 -152500003 + MER20 DNA MER1_type 1 219 0 3849 130 60 0 chr5 47130258 47130827 -152499323 - LTR26 LTR ERV1 0 603 1 2065 147 0 3 chr5 47130889 47131201 -152498949 + AluSx SINE Alu 1 311 -1 2905 6 0 0 chr5 47131401 47131712 -152498438 - AluYa5 SINE Alu 0 311 1 1928 144 3 30 chr5 47131741 47132039 -152498111 + AluJo SINE Alu 1 290 -22 237 341 11 22 chr5 47132080 47132171 -152497979 + HAL1 LINE L1 2414 2503 -4 2328 100 3 3 chr5 47132361 47132670 -152497480 + AluSc SINE Alu 1 309 0 26 30 0 0 chr5 47133057 47133090 -152497060 + AT_rich Low_complexity Low_complexity 1 33 0 440 242 68 8 chr5 47133090 47133222 -152496928 + MIR SINE MIR 57 196 -66 2113 128 0 3 chr5 47133518 47133830 -152496320 + AluSx SINE Alu 1 311 -1 1835 128 6 47 chr5 47134199 47134519 -152495631 + AluJo SINE Alu 1 307 -5 605 231 65 123 chr5 47134519 47134999 -152495151 + L1MC4 LINE L1 7591 8042 0 1530 172 82 8 chr5 47135072 47135340 -152494810 - AluJo SINE Alu -24 288 1 231 207 11 23 chr5 47135971 47136058 -152494092 + GA-rich Low_complexity Low_complexity 2 87 0 2262 122 3 0 chr5 47136487 47136798 -152493352 - AluSq SINE Alu -1 312 1 243 0 0 0 chr5 47137355 47137382 -152492768 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2123 122 3 10 chr5 47137485 47137789 -152492361 + AluSq SINE Alu 1 302 -11 2442 38 35 3 chr5 47138588 47138876 -152491274 - AluY SINE Alu -14 297 1 370 253 13 0 chr5 47140591 47140670 -152489480 + L2 LINE L2 3226 3305 -8 291 349 63 0 chr5 47140910 47141051 -152489099 + MIR SINE MIR 37 184 -58 1867 148 14 0 chr5 47141321 47141605 -152488545 - AluJb SINE Alu -24 288 1 375 262 115 8 chr5 47142490 47142612 -152487538 - L2 LINE L2 -2 3270 3136 1585 127 26 85 chr5 47142671 47142978 -152487172 + L1MB7 LINE L1 5866 6154 -30 246 269 67 10 chr5 47145200 47145326 -152484824 - L1MC4 LINE L1 -1 8041 5959 225 228 0 53 chr5 47145318 47145375 -152484775 - L1MC4 LINE L1 -2065 5743 5690 * 646 300 22 31 chr5 47145375 47145602 -152484548 - MIR SINE MIR 0 262 38 602 178 156 106 chr5 47145680 47145784 -152484366 - MER5A DNA MER1_type 0 189 70 2057 130 0 0 chr5 47145784 47146094 -152484056 - AluSx SINE Alu 0 310 1 602 178 156 106 chr5 47146094 47146168 -152483982 - MER5A DNA MER1_type -119 70 1 741 255 79 41 chr5 47146191 47146463 -152483687 - L1MC4 LINE L1 -530 5634 5352 22 0 0 0 chr5 47146485 47146507 -152483643 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 47146657 47146692 -152483458 + AT_rich Low_complexity Low_complexity 1 35 0 703 173 0 31 chr5 47146887 47147014 -152483136 - FLAM_C SINE Alu -10 123 1 2395 97 3 0 chr5 47147024 47147332 -152482818 - AluSq SINE Alu -4 309 1 869 283 96 22 chr5 47147808 47148363 -152481787 - L1MC4 LINE L1 -1293 4853 4258 593 303 89 7 chr5 47148539 47148843 -152481307 - L1MC4 LINE L1 -2322 3824 3496 236 91 23 0 chr5 47148870 47148914 -152481236 + (TA)n Simple_repeat Simple_repeat 2 46 0 1523 138 102 25 chr5 47149072 47149296 -152480854 + AluJo SINE Alu 1 251 -61 3982 81 38 40 chr5 47149296 47149533 -152480617 - MER41A LTR ERV1 -1 553 317 2491 48 3 32 chr5 47149533 47149847 -152480303 - AluY SINE Alu -6 305 1 3982 81 38 40 chr5 47149847 47150163 -152479987 - MER41A LTR ERV1 -237 317 1 1523 138 102 25 chr5 47150163 47150213 -152479937 + AluJo SINE Alu 251 296 -16 266 50 25 0 chr5 47150429 47150469 -152479681 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 810 170 23 23 chr5 47151182 47151353 -152478797 + MER96B DNA MER1_type? 24 194 -223 266 345 36 27 chr5 47151767 47151877 -152478273 - L2 LINE L2 -8 3264 3154 1043 188 5 40 chr5 47151892 47152115 -152478035 - AluJo SINE Alu -10 302 88 205 332 195 25 chr5 47152139 47152247 -152477903 + L2 LINE L2 1945 2033 -1281 2254 100 0 7 chr5 47152247 47152546 -152477604 + AluSg1 SINE Alu 1 297 -12 205 332 195 25 chr5 47152546 47153046 -152477104 + L2 LINE L2 2033 2657 -657 1848 168 7 3 chr5 47153519 47153823 -152476327 - AluJo SINE Alu -7 305 1 785 163 23 0 chr5 47154032 47154161 -152475989 - BC200 scRNA scRNA -67 133 2 332 213 0 0 chr5 47154249 47154310 -152475840 + MER5A DNA MER1_type 9 69 -120 2367 94 3 3 chr5 47154480 47154789 -152475361 + AluSg SINE Alu 1 309 -1 741 240 134 0 chr5 47155126 47155343 -152474807 + MIR SINE MIR 5 250 -12 224 203 0 125 chr5 47155366 47155430 -152474720 + L2 LINE L2 3208 3263 -9 927 194 131 9 chr5 47155430 47155652 -152474498 + LTR41 LTR ERVL 1 249 -524 805 218 254 51 chr5 47155677 47156012 -152474138 + LTR41 LTR ERVL 360 762 -11 41393 67 8 2 chr5 47156226 47162332 -152467818 + L1PA5 LINE L1 11 6150 -4 22 35 0 0 chr5 47162451 47162480 -152467670 + AT_rich Low_complexity Low_complexity 1 29 0 984 118 6 37 chr5 47162558 47162719 -152467431 - AluJo/FRAM SINE Alu -1 311 156 696 128 27 149 chr5 47162722 47162830 -152467320 + AluJo SINE Alu 43 130 -182 2327 99 0 7 chr5 47162830 47163134 -152467016 + AluSq SINE Alu 3 304 -9 696 128 27 149 chr5 47163134 47163173 -152466977 + AluJo SINE Alu 130 172 -140 322 196 76 22 chr5 47164738 47164830 -152465320 - Charlie8 DNA MER1_type -2210 207 111 241 143 54 0 chr5 47165167 47165223 -152464927 + CT-rich Low_complexity Low_complexity 1 59 0 916 176 0 91 chr5 47165227 47165414 -152464736 - FAM SINE Alu -5 170 1 379 252 44 69 chr5 47166280 47166439 -152463711 + MER5A DNA MER1_type 35 189 0 241 338 79 21 chr5 47166701 47166842 -152463308 + MIR3 SINE MIR 8 173 -35 1375 178 12 4 chr5 47166862 47167120 -152463030 + MER33 DNA MER1_type 1 260 -64 965 220 45 89 chr5 47167123 47167465 -152462685 + MLT1A1 LTR MaLR 1 326 -39 557 114 23 0 chr5 47167465 47167553 -152462597 + MER21A LTR ERV1 1 90 -841 352 94 0 0 chr5 47167555 47167608 -152462542 - Alu SINE Alu -2 300 248 817 100 0 18 chr5 47167608 47167718 -152462432 - AluSg1 SINE Alu -201 108 1 3736 135 74 135 chr5 47167718 47168134 -152462016 + MER21A LTR ERV1 71 511 -420 533 149 0 0 chr5 47168134 47168208 -152461942 - AluJ/FLAM SINE Alu -237 75 2 3736 135 74 135 chr5 47168208 47168289 -152461861 + MER21A LTR ERV1 511 595 -336 7882 100 8 26 chr5 47168289 47169379 -152460771 + MER11C LTR ERVK 1 1071 0 3736 135 74 135 chr5 47169379 47169724 -152460426 + MER21A LTR ERV1 595 931 0 274 108 0 0 chr5 47169726 47169763 -152460387 + MLT1A1 LTR MaLR 360 396 0 1434 188 8 16 chr5 47170172 47170422 -152459728 + AluJo SINE Alu 1 248 -64 201 121 0 0 chr5 47171559 47171592 -152458558 + (TA)n Simple_repeat Simple_repeat 2 34 0 2063 134 0 0 chr5 47171596 47171887 -152458263 - AluSq SINE Alu -22 291 1 228 235 130 31 chr5 47172136 47172298 -152457852 - L1ME4a LINE L1 -2 6119 5942 415 286 10 20 chr5 47172322 47172420 -152457730 - L2 LINE L2 -30 3242 3146 2062 118 21 0 chr5 47172529 47172818 -152457332 - AluSx SINE Alu -17 295 1 289 284 34 89 chr5 47172848 47172925 -152457225 - L1ME4a LINE L1 -317 5804 5724 1807 171 3 3 chr5 47172925 47173217 -152456933 - AluJb SINE Alu -20 292 1 289 284 34 89 chr5 47173217 47173375 -152456775 - L1ME4a LINE L1 -397 5724 5582 295 271 65 19 chr5 47173775 47173882 -152456268 - MER91A DNA MER1_type -84 112 1 233 264 32 52 chr5 47174527 47174682 -152455468 - L1MC/D LINE L1 -1925 5883 5732 2237 115 0 0 chr5 47174793 47175088 -152455062 - AluSg SINE Alu -15 295 1 1773 168 7 3 chr5 47175108 47175406 -152454744 + AluJb SINE Alu 1 299 -13 257 182 91 52 chr5 47175406 47175483 -152454667 - L1MC/D LINE L1 -477 5644 5565 275 270 63 0 chr5 47175544 47175607 -152454543 + L2 LINE L2 3204 3270 -2 200 194 56 0 chr5 47176251 47176287 -152453863 - MIR SINE MIR -139 123 86 346 304 180 55 chr5 47176361 47176871 -152453279 + L1MC4a LINE L1 4692 5265 -881 2142 98 11 0 chr5 47176928 47177213 -152452937 + AluSx SINE Alu 1 288 -24 28 0 0 0 chr5 47177213 47177241 -152452909 + AT_rich Low_complexity Low_complexity 1 28 0 985 271 128 25 chr5 47177241 47177728 -152452422 + L1MC4a LINE L1 5315 5863 -1945 2314 86 7 10 chr5 47177728 47178029 -152452121 + AluSq SINE Alu 1 300 -13 985 271 128 25 chr5 47178029 47178072 -152452078 + L1MC4a LINE L1 5863 5900 -1908 2112 97 50 0 chr5 47178195 47178473 -152451677 - AluSx SINE Alu -20 292 1 1965 220 222 2 chr5 47178587 47179123 -152451027 - MLT1E1 LTR MaLR 0 654 1 828 252 117 5 chr5 47179170 47179392 -152450758 - MIR SINE MIR -10 252 6 1228 159 5 10 chr5 47179438 47179646 -152450504 + AluJb SINE Alu 85 291 -21 1641 233 128 39 chr5 47179659 47180175 -152449975 - MLT1G1 LTR MaLR -2 593 32 2453 128 27 3 chr5 47180388 47180717 -152449433 - MER1B DNA MER1_type 0 337 1 267 254 0 0 chr5 47180913 47180972 -152449178 - L2 LINE L2 0 3313 3255 21 0 0 0 chr5 47181343 47181364 -152448786 + AT_rich Low_complexity Low_complexity 1 21 0 521 267 89 0 chr5 47181368 47181503 -152448647 + MER119 DNA MER1_type 3 149 -434 * 567 178 37 44 chr5 47181484 47181526 -152448624 + MER119 DNA MER1_type 449 490 -93 2297 112 0 0 chr5 47181526 47181830 -152448320 + AluSx SINE Alu 1 304 -8 567 178 37 44 chr5 47181830 47181922 -152448228 + MER119 DNA MER1_type 490 582 -1 190 244 183 0 chr5 47182809 47182891 -152447259 - L2 LINE L2 -336 2977 2881 1951 114 16 54 chr5 47183031 47183348 -152446802 - AluSx SINE Alu -7 305 1 500 325 108 35 chr5 47183549 47184077 -152446073 + L2 LINE L2 2709 3264 -8 2260 105 7 0 chr5 47184159 47184455 -152445695 - AluSx SINE Alu -14 298 1 211 258 247 10 chr5 47184681 47184778 -152445372 - MIR3 SINE MIR -7 201 82 793 239 129 32 chr5 47184927 47185202 -152444948 + MLT1D LTR MaLR 13 314 -312 1134 191 194 50 chr5 47185202 47185245 -152444905 - MLT1A1 LTR MaLR 0 365 330 2217 99 7 7 chr5 47185245 47185547 -152444603 + AluSq SINE Alu 1 302 -11 1134 191 194 50 chr5 47185547 47185822 -152444328 - MLT1A1 LTR MaLR -35 330 1 1168 202 5 0 chr5 47185822 47186030 -152444120 + MLT1D LTR MaLR 296 504 -1 528 281 128 42 chr5 47187368 47188008 -152442142 - L1ME4a LINE L1 -13 6108 5414 1959 121 3 67 chr5 47188108 47188439 -152441711 - AluSq SINE Alu -3 310 1 1971 110 21 11 chr5 47188764 47189090 -152441060 - AluSq SINE Alu 0 329 1 762 151 71 24 chr5 47190113 47190239 -152439911 + AluJ SINE Alu 2 133 -169 1071 180 10 35 chr5 47190257 47190457 -152439693 + AluJ SINE Alu 118 312 0 2319 95 7 3 chr5 47190464 47190770 -152439380 + AluY SINE Alu 1 307 -4 788 233 74 6 chr5 47191512 47191688 -152438462 + MER5A DNA MER1_type 2 189 0 1977 113 49 3 chr5 47192175 47192481 -152437669 + AluSx SINE Alu 1 312 0 41807 65 7 6 chr5 47192512 47198648 -152431502 - L1PA5 LINE L1 -1 6153 11 805 218 254 51 chr5 47198862 47199197 -152430953 - LTR41 LTR ERVL -11 762 360 927 194 131 9 chr5 47199222 47199444 -152430706 - LTR41 LTR ERVL -524 249 1 224 203 0 125 chr5 47199444 47199508 -152430642 - L2 LINE L2 -9 3263 3208 741 240 134 0 chr5 47199531 47199748 -152430402 - MIR SINE MIR -12 250 5 2367 94 3 3 chr5 47200085 47200394 -152429756 - AluSg SINE Alu -1 309 1 332 213 0 0 chr5 47200564 47200625 -152429525 - MER5A DNA MER1_type -120 69 9 752 163 8 8 chr5 47200713 47200842 -152429308 + FLAM_C SINE Alu 2 130 -3 1868 174 3 3 chr5 47201051 47201356 -152428794 + AluJo SINE Alu 1 305 -7 205 332 195 25 chr5 47201829 47202329 -152427821 - L2 LINE L2 -657 2657 2033 2254 100 0 7 chr5 47202329 47202628 -152427522 - AluSg1 SINE Alu -12 297 1 205 332 195 25 chr5 47202628 47202736 -152427414 - L2 LINE L2 -1281 2033 1945 1043 188 5 40 chr5 47202760 47202983 -152427167 + AluJo SINE Alu 88 302 -10 266 345 36 27 chr5 47202998 47203108 -152427042 + L2 LINE L2 3154 3264 -8 810 170 23 23 chr5 47203522 47203693 -152426457 - MER96B DNA MER1_type? -223 194 24 266 50 25 0 chr5 47204406 47204446 -152425704 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 1523 138 102 25 chr5 47204662 47204712 -152425438 - AluJo SINE Alu -16 296 251 3982 81 38 40 chr5 47204712 47205028 -152425122 + MER41A LTR ERV1 1 317 -237 2491 48 3 32 chr5 47205028 47205342 -152424808 + AluY SINE Alu 1 305 -6 3982 81 38 40 chr5 47205342 47205579 -152424571 + MER41A LTR ERV1 317 553 -1 1523 138 102 25 chr5 47205579 47205803 -152424347 - AluJo SINE Alu -61 251 1 236 91 23 0 chr5 47205961 47206005 -152424145 + (TA)n Simple_repeat Simple_repeat 2 46 0 593 303 89 7 chr5 47206032 47206336 -152423814 + L1MC4 LINE L1 3496 3824 -2322 869 283 96 22 chr5 47206512 47207067 -152423083 + L1MC4 LINE L1 4258 4853 -1293 2395 97 3 0 chr5 47207543 47207851 -152422299 + AluSq SINE Alu 1 309 -4 703 173 0 31 chr5 47207861 47207988 -152422162 + FLAM_C SINE Alu 1 123 -10 21 57 0 0 chr5 47208183 47208218 -152421932 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 47208368 47208390 -152421760 + AT_rich Low_complexity Low_complexity 1 22 0 741 255 79 41 chr5 47208412 47208684 -152421466 + L1MC4 LINE L1 5352 5634 -530 602 178 156 106 chr5 47208707 47208781 -152421369 + MER5A DNA MER1_type 1 70 -119 2058 130 0 0 chr5 47208781 47209091 -152421059 + AluSx SINE Alu 1 310 0 602 178 156 106 chr5 47209091 47209195 -152420955 + MER5A DNA MER1_type 70 189 0 646 300 22 31 chr5 47209273 47209500 -152420650 + MIR SINE MIR 38 262 0 225 228 0 53 chr5 47209500 47209557 -152420593 + L1MC4 LINE L1 5690 5743 -2065 * 246 269 67 10 chr5 47209549 47209675 -152420475 + L1MC4 LINE L1 5959 8041 -1 1585 127 26 85 chr5 47211898 47212205 -152417945 - L1MB7 LINE L1 -30 6154 5866 375 262 115 8 chr5 47212264 47212386 -152417764 + L2 LINE L2 3136 3270 -2 1867 148 14 0 chr5 47213272 47213556 -152416594 + AluJb SINE Alu 1 288 -24 291 349 63 0 chr5 47213826 47213967 -152416183 - MIR SINE MIR -58 150 37 370 253 13 0 chr5 47214207 47214286 -152415864 - L2 LINE L2 -8 3305 3226 2442 38 35 3 chr5 47216001 47216289 -152413861 + AluY SINE Alu 1 297 -14 2168 121 0 10 chr5 47217088 47217393 -152412757 - AluSq SINE Alu -11 302 1 243 0 0 0 chr5 47217496 47217523 -152412627 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2262 122 3 0 chr5 47218080 47218391 -152411759 + AluSq SINE Alu 1 312 -1 231 207 11 23 chr5 47218820 47218907 -152411243 + CT-rich Low_complexity Low_complexity 2 87 0 1530 172 82 8 chr5 47219538 47219806 -152410344 + AluJo SINE Alu 1 288 -24 605 231 65 123 chr5 47219879 47220359 -152409791 - L1MC4 LINE L1 0 8042 7591 1835 128 6 47 chr5 47220359 47220679 -152409471 - AluJo SINE Alu -5 307 1 2113 128 0 3 chr5 47221048 47221360 -152408790 - AluSx SINE Alu -1 311 1 440 242 68 8 chr5 47221656 47221788 -152408362 - MIR SINE MIR -66 196 57 26 30 0 0 chr5 47221788 47221821 -152408329 + AT_rich Low_complexity Low_complexity 1 33 0 2328 100 3 3 chr5 47222208 47222517 -152407633 - AluSc SINE Alu 0 309 1 237 341 11 22 chr5 47222707 47222798 -152407352 - HAL1 LINE L1 -4 2503 2414 1928 144 3 30 chr5 47222839 47223137 -152407013 - AluJo SINE Alu -22 290 1 2905 6 0 0 chr5 47223166 47223477 -152406673 + AluYa5 SINE Alu 1 311 0 2065 147 0 3 chr5 47223677 47223989 -152406161 - AluSx SINE Alu -1 311 1 3849 130 60 0 chr5 47224051 47224620 -152405530 + LTR26 LTR ERV1 1 603 0 963 144 144 59 chr5 47224731 47224933 -152405217 - MER20 DNA MER1_type 0 219 1 741 117 25 17 chr5 47225032 47225152 -152404998 + MLT1E3 LTR MaLR 79 199 -425 1459 92 0 5 chr5 47225156 47225340 -152404810 - AluSp SINE Alu -24 289 107 636 116 0 12 chr5 47225343 47225429 -152404721 - AluSg/x SINE Alu -121 191 107 449 98 0 0 chr5 47225426 47225487 -152404663 - Alu SINE Alu -251 62 2 * 243 0 0 0 chr5 47225712 47225739 -152404411 + (T)n Simple_repeat Simple_repeat 1 27 0 556 29 0 0 chr5 47225810 47225879 -152404271 - AluY SINE Alu -4 308 240 2193 117 0 3 chr5 47225909 47226209 -152403941 + AluSg SINE Alu 1 299 -11 2484 83 0 0 chr5 47226397 47226697 -152403453 - AluSg SINE Alu -10 300 1 278 170 21 0 chr5 47226992 47227039 -152403111 + L2 LINE L2 3262 3309 -4 2188 89 7 0 chr5 47227600 47227880 -152402270 + AluSp SINE Alu 3 284 -29 994 208 41 143 chr5 47227891 47228097 -152402053 + L1ME3A LINE L1 5486 5711 -459 2160 120 0 7 chr5 47228097 47228396 -152401754 + AluSx SINE Alu 1 297 -15 994 208 41 143 chr5 47228396 47228529 -152401621 + L1ME3A LINE L1 5711 5768 -402 2100 151 0 0 chr5 47228529 47228840 -152401310 + AluSx SINE Alu 1 311 -1 994 208 41 143 chr5 47228840 47228961 -152401189 + L1ME3A LINE L1 5768 5900 -270 2293 168 61 7 chr5 47228975 47229385 -152400765 + MSTB1 LTR MaLR 1 432 0 2193 202 82 22 chr5 47229385 47229882 -152400268 - MLT1F LTR MaLR -7 535 9 696 221 25 0 chr5 47229901 47230059 -152400091 + L1ME3A LINE L1 5915 6076 -94 243 217 0 33 chr5 47230129 47230166 -152399984 + GA-rich Low_complexity Low_complexity 3 39 -21 2166 130 3 0 chr5 47230166 47230473 -152399677 + AluSq SINE Alu 1 308 -5 243 217 0 33 chr5 47230473 47230495 -152399655 + GA-rich Low_complexity Low_complexity 39 60 0 702 232 94 97 chr5 47230957 47231350 -152398800 - MLT1H1 LTR MaLR -8 547 156 303 176 162 14 chr5 47231381 47231455 -152398695 - MLT1H1 LTR MaLR -457 85 1 2022 119 13 22 chr5 47231480 47231791 -152398359 + AluSx SINE Alu 1 308 -4 656 205 17 19 chr5 47231934 47232115 -152398035 + MLT1E LTR MaLR 3 185 -382 555 56 0 0 chr5 47232121 47232192 -152397958 + (TC)n Simple_repeat Simple_repeat 2 72 0 1759 155 174 27 chr5 47232244 47232651 -152397499 - MLT1C LTR MaLR 0 467 1 635 269 37 33 chr5 47232669 47232911 -152397239 - MLT1J LTR MaLR -268 243 1 394 319 57 32 chr5 47233018 47233175 -152396975 - MIR SINE MIR -75 187 27 1138 144 5 0 chr5 47233376 47233564 -152396586 + L1P3 LINE L1 2 190 -6271 * 11124 104 56 63 chr5 47233544 47235905 -152394245 + L1P3 LINE L1 36 2520 -3941 2164 135 0 0 chr5 47235905 47236201 -152393949 + AluSc SINE Alu 3 298 -11 11124 104 56 63 chr5 47236201 47236591 -152393559 + L1P3 LINE L1 2520 2911 -3550 537 149 28 0 chr5 47236706 47236813 -152393337 - L1MA6 LINE L1 -1 6299 6190 218 192 19 0 chr5 47236848 47236900 -152393250 + (CA)n Simple_repeat Simple_repeat 2 54 0 408 77 15 0 chr5 47237027 47237092 -152393058 + MER41A LTR ERV1 402 467 -87 377 295 38 0 chr5 47237826 47237931 -152392219 + L2 LINE L2 3190 3298 -15 24 32 0 0 chr5 47238723 47238754 -152391396 + AT_rich Low_complexity Low_complexity 1 31 0 3548 167 17 11 chr5 47238773 47239492 -152390658 + L1P LINE L1 4207 4929 -1217 672 229 0 66 chr5 47239615 47239798 -152390352 + LTR8A LTR ERV1 557 727 0 5595 220 13 9 chr5 47239798 47241243 -152388907 + L1 LINE L1 2396 3846 -2300 4649 140 25 0 chr5 47241244 47242008 -152388142 + L1P LINE L1 1 783 -5363 21115 51 12 13 chr5 47242110 47245029 -152385121 - L1P LINE L1 -1598 4548 1632 1948 154 3 59 chr5 47245389 47245745 -152384405 + MER1B DNA MER1_type 2 337 0 2135 118 10 0 chr5 47245909 47246213 -152383937 - AluSx SINE Alu -5 307 1 25 31 0 0 chr5 47246240 47246272 -152383878 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr5 47248342 47248372 -152381778 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 47248674 47248696 -152381454 + AT_rich Low_complexity Low_complexity 1 22 0 2195 108 10 0 chr5 47248732 47249027 -152381123 - AluSx SINE Alu -13 299 2 2175 112 3 0 chr5 47250133 47250420 -152379730 + AluSp SINE Alu 1 288 -25 1177 164 0 0 chr5 47250750 47250927 -152379223 + AluSg/x SINE Alu 124 300 -12 631 317 84 28 chr5 47250944 47251300 -152378850 + HAL1b LINE L1 60 435 -913 1814 155 16 16 chr5 47251625 47251929 -152378221 - AluJo SINE Alu -8 304 1 719 260 105 0 chr5 47252117 47252317 -152377833 - MIR SINE MIR -34 228 8 1956 101 50 22 chr5 47252455 47252764 -152377386 - AluSq SINE Alu 0 317 1 409 284 135 18 chr5 47252764 47252891 -152377259 - MIR SINE MIR -12 250 139 5210 109 23 45 chr5 47252891 47253431 -152376719 + L1PB4 LINE L1 5137 5654 -502 2048 153 0 10 chr5 47253431 47253744 -152376406 + AluJb SINE Alu 2 311 -1 5210 109 23 45 chr5 47253744 47254236 -152375914 + L1PB4 LINE L1 5654 6156 0 409 284 135 18 chr5 47254236 47254330 -152375820 - MIR SINE MIR -123 139 3 454 171 133 19 chr5 47254465 47254570 -152375580 - L2 LINE L2 -2 3311 3195 198 0 0 0 chr5 47255846 47255868 -152374282 + (T)n Simple_repeat Simple_repeat 1 22 0 270 337 22 0 chr5 47256081 47256170 -152373980 + MLT1K LTR MaLR 159 249 -339 2342 207 67 34 chr5 47256675 47256779 -152373371 + L1ME1 LINE L1 4657 4756 -1410 1994 141 10 0 chr5 47256779 47257070 -152373080 + AluJo SINE Alu 1 294 -18 2342 207 67 34 chr5 47257070 47257176 -152372974 + L1ME1 LINE L1 4756 4857 -1309 2219 112 3 19 chr5 47257176 47257490 -152372660 - AluSx SINE Alu -3 309 1 1089 214 103 53 chr5 47257492 47257773 -152372377 - AluJb SINE Alu -7 295 1 2342 207 67 34 chr5 47257773 47258748 -152371402 + L1ME1 LINE L1 4857 5894 -272 1034 176 31 39 chr5 47258748 47258983 -152371167 + L1MC2 LINE L1 6082 6316 -28 2013 138 165 5 chr5 47258983 47259352 -152370798 - MSTA LTR MaLR 0 428 1 1034 176 31 39 chr5 47259352 47259372 -152370778 + L1MC2 LINE L1 6316 6335 -9 26 0 0 0 chr5 47259404 47259430 -152370720 + AT_rich Low_complexity Low_complexity 1 26 0 931 179 6 12 chr5 47259541 47259714 -152370436 - AluJb SINE Alu -18 294 123 1920 155 0 10 chr5 47259735 47260039 -152370111 - AluJb SINE Alu -11 301 1 681 262 29 44 chr5 47260055 47260330 -152369820 + L1ME1 LINE L1 5891 6161 -5 341 300 45 41 chr5 47260987 47261267 -152368883 + L1MEc LINE L1 2113 2435 -3807 26 0 0 0 chr5 47261367 47261393 -152368757 + AT_rich Low_complexity Low_complexity 1 26 0 3517 127 11 0 chr5 47261427 47261948 -152368202 - MER1A DNA MER1_type 0 527 1 12900 168 41 14 chr5 47262017 47264462 -152365688 + L1MA1 LINE L1 14 2525 -5040 650 50 119 0 chr5 47264462 47264622 -152365528 + L1P LINE L1 3029 3207 -2939 236 146 0 0 chr5 47264722 47264763 -152365387 + L1MA1 LINE L1 2485 2525 -5040 19315 32 11 10 chr5 47264763 47267902 -152362248 + L1PA4 LINE L1 3028 6152 -3 4951 152 119 13 chr5 47267907 47268803 -152361347 + L1MA1 LINE L1 2441 3549 -4016 1737 183 0 49 chr5 47268803 47269131 -152361019 + AluSx SINE Alu 1 312 0 4951 152 119 13 chr5 47269131 47269670 -152360480 + L1MA1 LINE L1 3549 4030 -3535 248 111 22 22 chr5 47269696 47269741 -152360409 + MER4A LTR ERV1 54 98 -566 1216 157 7 62 chr5 47269741 47269932 -152360218 + MER4A LTR ERV1 262 490 -174 4273 53 7 18 chr5 47269932 47270496 -152359654 - LTR6B LTR ERV1 0 558 1 1216 157 7 62 chr5 47270496 47270606 -152359544 + MER4A LTR ERV1 490 605 -59 2503 202 40 0 chr5 47270706 47271299 -152358851 + L1MA1 LINE L1 4028 4644 -2921 * 5891 171 8 40 chr5 47271286 47271660 -152358490 + L1MA1 LINE L1 5082 5466 -2255 4529 107 7 19 chr5 47271660 47272140 -152358010 + MER4A LTR ERV1 1 472 -192 2022 155 3 7 chr5 47272140 47272444 -152357706 - AluSx SINE Alu -9 303 1 4529 107 7 19 chr5 47272444 47272635 -152357515 + MER4A LTR ERV1 472 664 0 5891 171 8 40 chr5 47272635 47274860 -152355290 + L1MA1 LINE L1 5466 7477 -244 2326 103 0 0 chr5 47274860 47275170 -152354980 + AluSg SINE Alu 1 310 0 5891 171 8 40 chr5 47275170 47275240 -152354910 + L1MA1 LINE L1 7477 7548 -173 * 8301 65 36 9 chr5 47275237 47276482 -152353668 + L1PA7 LINE L1 4110 5427 -727 2391 94 7 0 chr5 47276482 47276790 -152353360 + AluSp SINE Alu 2 311 -2 8301 65 36 9 chr5 47276790 47277537 -152352613 + L1PA7 LINE L1 5427 6152 -2 1136 268 155 32 chr5 47277914 47278500 -152351650 + MLT2F LTR ERVL 6 663 0 261 0 0 0 chr5 47278511 47278540 -152351610 + (T)n Simple_repeat Simple_repeat 1 29 0 296 230 0 20 chr5 47278570 47278670 -152351480 + L1ME4a LINE L1 4561 4658 -1488 27 0 0 0 chr5 47278883 47278910 -152351240 + AT_rich Low_complexity Low_complexity 1 27 0 1570 196 19 19 chr5 47278912 47279223 -152350927 + AluJo SINE Alu 1 311 -1 2303 72 10 23 chr5 47279309 47279615 -152350535 + AluSg SINE Alu 1 302 -8 254 232 71 0 chr5 47279807 47279863 -152350287 - LTR67 LTR ERVL -385 172 113 426 183 0 12 chr5 47279962 47280044 -152350106 + Tigger5 DNA MER2_type 2243 2323 0 657 293 126 19 chr5 47280649 47281277 -152348873 + L1ME4a LINE L1 5257 5951 -170 21 0 0 0 chr5 47281518 47281539 -152348611 + AT_rich Low_complexity Low_complexity 1 21 0 1787 162 3 32 chr5 47282315 47282624 -152347526 - AluJo SINE Alu -12 300 1 2604 42 0 7 chr5 47282799 47283105 -152347045 - AluY SINE Alu -7 304 1 1623 166 52 28 chr5 47283108 47283398 -152346752 - AluJo SINE Alu -10 302 6 879 124 87 62 chr5 47283692 47283837 -152346313 + MLT1F LTR MaLR 325 531 -64 2349 68 0 3 chr5 47283837 47284144 -152346006 - AluY SINE Alu -5 306 1 879 124 87 62 chr5 47284144 47284209 -152345941 + MLT1F LTR MaLR 531 593 -2 1975 140 16 3 chr5 47287230 47287538 -152342612 - AluJo SINE Alu 0 312 1 315 261 185 27 chr5 47287589 47287773 -152342377 - L2 LINE L2 -105 3208 2996 1890 171 0 16 chr5 47288286 47288602 -152341548 + AluJo SINE Alu 1 311 -1 26 50 0 0 chr5 47288720 47288760 -152341390 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 47289620 47289643 -152340507 + AT_rich Low_complexity Low_complexity 1 23 0 3083 117 11 2 chr5 47341824 47342260 -152287890 + MER41C-int LTR ERV1 7317 7756 0 3333 152 49 9 chr5 47342260 47342580 -152287570 + MER41C LTR ERV1 1 352 -202 207 0 0 0 chr5 47342580 47342603 -152287547 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3333 152 49 9 chr5 47342603 47342815 -152287335 + MER41C LTR ERV1 352 554 0 14594 164 111 107 chr5 47342820 47345330 -152284820 - LTR49-int LTR ERV1 -87 6244 3747 1864 183 3 10 chr5 47345330 47345642 -152284508 - AluJb SINE Alu -2 310 1 14594 164 111 107 chr5 47345642 47346046 -152284104 - LTR49-int LTR ERV1 -2584 3747 3346 2235 114 0 7 chr5 47346046 47346345 -152283805 - AluSq SINE Alu -16 297 1 14594 164 111 107 chr5 47346345 47346583 -152283567 - LTR49-int LTR ERV1 -2985 3346 3111 2447 167 23 46 chr5 47346583 47346868 -152283282 + MSTB LTR MaLR 1 274 -152 2150 141 0 3 chr5 47346868 47347181 -152282969 - AluSx SINE Alu 0 312 1 2447 167 23 46 chr5 47347181 47347331 -152282819 + MSTB LTR MaLR 274 426 0 14594 164 111 107 chr5 47347331 47347432 -152282718 - LTR49-int LTR ERV1 -3220 3111 3012 1176 154 4 68 chr5 47347432 47347635 -152282515 + AluJb SINE Alu 87 275 -37 2218 155 119 18 chr5 47347635 47348022 -152282128 + MSTB LTR MaLR 1 426 0 1176 154 4 68 chr5 47348022 47348052 -152282098 + AluJb SINE Alu 275 305 -7 14594 164 111 107 chr5 47348052 47348889 -152281261 - LTR49-int LTR ERV1 -3319 3012 1895 10276 30 21 129 chr5 47348889 47350461 -152279689 - SVA Other Other 0 1386 17 14594 164 111 107 chr5 47350461 47350688 -152279462 - LTR49-int LTR ERV1 -4436 1895 1670 372 158 45 0 chr5 47350702 47350835 -152279315 + (TA)n Simple_repeat Simple_repeat 1 139 0 181 134 21 52 chr5 47350814 47350911 -152279239 + (TTATA)n Simple_repeat Simple_repeat 1 94 0 * 342 153 53 0 chr5 47350915 47351072 -152279078 + (TA)n Simple_repeat Simple_repeat 2 170 -10 191 35 0 35 chr5 47351072 47351101 -152279049 + (TATAA)n Simple_repeat Simple_repeat 3 30 0 342 153 53 0 chr5 47351101 47351113 -152279037 + (TA)n Simple_repeat Simple_repeat 170 180 0 1165 190 146 12 chr5 47351114 47351402 -152278748 - LTR49-int LTR ERV1 -4665 1666 998 541 134 0 36 chr5 47351516 47351628 -152278522 - LTR49-int LTR ERV1 -4941 1390 1283 370 258 0 0 chr5 47351628 47351694 -152278456 - tRNA-Glu-GAG tRNA tRNA 0 75 10 892 147 71 61 chr5 47351697 47351751 -152278399 - LTR49-int LTR ERV1 -5118 1213 1161 7646 66 31 2 chr5 47351751 47352693 -152277457 + LTR5 LTR ERVK 1 969 0 892 147 71 61 chr5 47352693 47352835 -152277315 - LTR49-int LTR ERV1 -5170 1161 1015 * 2039 158 29 35 chr5 47352833 47353577 -152276573 - LTR49-int LTR ERV1 -4466 1480 1 809 156 4 1 chr5 47353579 47353722 -152276428 - LTR49 LTR ERV1 0 595 468 555 143 0 22 chr5 47353721 47353812 -152276338 + LTR49 LTR ERV1 505 593 -2 * 385 174 29 0 chr5 47353837 47353906 -152276244 - L2 LINE L2 -5 3308 3238 579 311 108 42 chr5 47353943 47354322 -152275828 - L2 LINE L2 -667 2647 2244 3416 135 67 23 chr5 47354593 47355208 -152274942 - MER39B LTR ERV1 -2 651 10 223 216 216 11 chr5 47355434 47355522 -152274628 - MIR SINE MIR 0 262 157 2007 195 23 66 chr5 47355540 47356027 -152274123 + MER41B LTR ERV1 134 599 -36 268 297 50 10 chr5 47356092 47356193 -152273957 + MER66-int LTR ERV1 400 504 -6172 2369 107 0 0 chr5 47356251 47356560 -152273590 - AluSg SINE Alu -1 309 1 653 227 30 129 chr5 47356578 47356943 -152273207 + MER66-int LTR ERV1 756 1084 -5592 2282 70 0 3 chr5 47357064 47357375 -152272775 + AluY SINE Alu 1 310 0 903 176 20 0 chr5 47357573 47357726 -152272424 + MER66-int LTR ERV1 1302 1457 -5219 2574 50 0 0 chr5 47359178 47359480 -152270670 + AluY SINE Alu 1 302 -9 2221 112 3 7 chr5 47359896 47360192 -152269958 - AluSx SINE Alu -17 295 1 1413 230 43 16 chr5 47360192 47360644 -152269506 + MER66-int LTR ERV1 2334 2836 -3840 988 176 17 116 chr5 47360700 47361002 -152269148 + MER41B LTR ERV1 340 611 -24 465 268 125 12 chr5 47361011 47361179 -152268971 - MIR SINE MIR -73 189 3 1715 176 7 7 chr5 47361916 47362206 -152267944 - AluSx SINE Alu -22 290 1 308 233 33 147 chr5 47362519 47362669 -152267481 - Tigger8 DNA MER2_type -488 178 46 1807 151 45 59 chr5 47362973 47363331 -152266819 + MLT1A1 LTR MaLR 13 365 0 241 330 75 0 chr5 47363375 47363481 -152266669 - L2 LINE L2 -192 3080 2967 300 326 62 51 chr5 47363634 47363747 -152266403 + MIR SINE MIR 28 145 -117 2074 93 55 14 chr5 47363747 47364037 -152266113 + AluSg SINE Alu 1 302 -8 300 326 62 51 chr5 47364037 47364101 -152266049 + MIR SINE MIR 145 207 -55 3276 256 37 86 chr5 47364910 47365236 -152264914 - L1MD1 LINE L1 0 6242 5902 1799 176 0 0 chr5 47365236 47365520 -152264630 + AluSx SINE Alu 1 284 -28 3276 256 37 86 chr5 47365520 47366009 -152264141 - L1MD1 LINE L1 -340 5902 5391 1969 147 3 23 chr5 47366009 47366316 -152263834 - AluJb SINE Alu -11 301 1 3276 256 37 86 chr5 47366316 47366646 -152263504 - L1MD1 LINE L1 -851 5391 5197 2217 96 4 0 chr5 47366646 47366965 -152263185 - AluSq SINE Alu 0 320 1 3276 256 37 86 chr5 47366965 47367298 -152262852 - L1MD1 LINE L1 -1045 5197 4849 186 302 86 35 chr5 47367298 47367414 -152262736 - MIR SINE MIR -12 250 129 301 277 24 12 chr5 47367479 47367562 -152262588 - L2 LINE L2 -2 3270 3187 241 389 98 16 chr5 47367568 47367761 -152262389 - L2 LINE L2 -224 3048 2840 459 228 16 24 chr5 47367766 47367893 -152262257 - L2 LINE L2 -969 2345 2220 1990 136 16 3 chr5 47367992 47368300 -152261850 + AluSx SINE Alu 1 312 0 3101 113 24 5 chr5 47368516 47368942 -152261208 + MER57B LTR ERV1 1 434 0 1770 184 37 56 chr5 47369256 47369705 -152260445 + MLT1C LTR MaLR 1 467 0 2114 100 17 23 chr5 47369759 47370058 -152260092 - AluSq SINE Alu -16 297 1 35 24 0 0 chr5 47370847 47370889 -152259261 + AT_rich Low_complexity Low_complexity 1 42 0 1066 191 91 0 chr5 47371404 47371603 -152258547 - MER20 DNA MER1_type 0 219 3 212 200 0 0 chr5 47374372 47374412 -152255738 - MIR SINE MIR -75 187 148 1498 181 7 4 chr5 47374424 47374695 -152255455 - AluJo SINE Alu -38 274 3 657 193 73 7 chr5 47374695 47374845 -152255305 - MIR SINE MIR -100 162 3 2988 3 0 0 chr5 47374961 47375278 -152254872 + AluYb8 SINE Alu 1 317 -1 265 247 198 25 chr5 47375735 47375897 -152254253 - MIR3 SINE MIR -3 205 16 1092 104 0 114 chr5 47376702 47376890 -152253260 - AluSc SINE Alu 0 309 144 2534 140 32 16 chr5 47376890 47377333 -152252817 + LTR7 LTR ERV1 1 450 0 1092 104 0 114 chr5 47377333 47377345 -152252805 - AluSc SINE Alu -165 144 132 740 148 98 16 chr5 47377345 47377467 -152252683 - FLAM_C SINE Alu -1 132 1 2229 117 0 0 chr5 47377655 47377955 -152252195 - AluSg SINE Alu -10 300 1 1177 278 120 5 chr5 47379182 47379574 -152250576 + L2 LINE L2 2396 2832 -482 198 0 0 0 chr5 47379644 47379666 -152250484 + (T)n Simple_repeat Simple_repeat 1 22 0 317 203 0 0 chr5 47379670 47379739 -152250411 - LTR30 LTR ERV1 -98 624 556 559 195 22 119 chr5 47379787 47379972 -152250178 - MLT1J LTR MaLR -327 184 18 366 107 0 0 chr5 47380501 47380557 -152249593 + (TCCC)n Simple_repeat Simple_repeat 3 58 0 300 161 103 11 chr5 47380588 47380675 -152249475 - L1MC5 LINE L1 -399 7562 7468 23 0 0 0 chr5 47381338 47381361 -152248789 + AT_rich Low_complexity Low_complexity 1 23 0 255 287 26 26 chr5 47381865 47381980 -152248170 - MER103 DNA DNA -47 119 5 2847 19 0 0 chr5 47382504 47382822 -152247328 + AluYb8 SINE Alu 1 318 0 313 183 0 0 chr5 47384037 47384097 -152246053 - MER116 DNA Mariner -15 65 6 21 0 0 0 chr5 47384148 47384169 -152245981 + AT_rich Low_complexity Low_complexity 1 21 0 390 211 73 18 chr5 47384309 47384418 -152245732 + MER117 DNA MER1_type 53 167 -30 833 311 20 4 chr5 47385819 47386063 -152244087 - MIR SINE MIR -3 259 12 1090 254 24 0 chr5 47386334 47386582 -152243568 + MIR SINE MIR 9 262 0 234 0 0 0 chr5 47386647 47386673 -152243477 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 26 0 0 0 chr5 47387042 47387068 -152243082 + AT_rich Low_complexity Low_complexity 1 26 0 2021 120 75 61 chr5 47387373 47387799 -152242351 - MSTB1 LTR MaLR 0 432 1 2295 82 0 3 chr5 47387876 47388167 -152241983 - AluY SINE Alu -21 290 1 362 318 68 27 chr5 47388645 47388793 -152241357 + L3b LINE CR1 1336 1489 -94 1342 111 44 22 chr5 47388793 47389018 -152241132 - MER30 DNA MER1_type 0 230 1 549 280 161 64 chr5 47389044 47389214 -152240936 - L2 LINE L2 -24 3289 3137 696 159 0 80 chr5 47389214 47389352 -152240798 - FLAM_C SINE Alu -6 127 1 549 280 161 64 chr5 47389352 47389995 -152240155 - L2 LINE L2 -176 3137 2377 791 152 8 15 chr5 47390082 47390214 -152239936 - FLAM_C SINE Alu -2 131 1 341 288 149 39 chr5 47390221 47390436 -152239714 - MIR SINE MIR -13 249 15 222 37 0 0 chr5 47390591 47390618 -152239532 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 395 240 122 48 chr5 47393577 47393748 -152236402 - L1ME4a LINE L1 -236 5885 5685 1782 158 52 9 chr5 47393748 47394077 -152236073 - MER2 DNA MER2_type 0 344 2 395 240 122 48 chr5 47394077 47394176 -152235974 - L1ME4a LINE L1 -436 5685 5595 246 241 224 24 chr5 47394260 47394430 -152235720 - L1ME4a LINE L1 -19 6102 5899 424 207 17 0 chr5 47394430 47394546 -152235604 + (TA)n Simple_repeat Simple_repeat 1 118 0 377 318 62 22 chr5 47394619 47394893 -152235257 - MLT1K LTR MaLR -20 568 284 377 299 7 28 chr5 47394979 47395123 -152235027 - MER5A DNA MER1_type -6 183 43 33 43 0 0 chr5 47395252 47395299 -152234851 + AT_rich Low_complexity Low_complexity 1 47 0 2198 119 0 0 chr5 47396241 47396534 -152233616 - AluSq SINE Alu -20 293 1 5684 93 12 4 chr5 47396666 47397865 -152232285 - L1PB1 LINE L1 -9 6142 4910 304 313 70 8 chr5 47397947 47398075 -152232075 - L1ME4a LINE L1 -4 6117 5982 21 0 0 0 chr5 47399369 47399390 -152230760 + AT_rich Low_complexity Low_complexity 1 21 0 210 143 0 0 chr5 47399617 47399652 -152230498 + (A)n Simple_repeat Simple_repeat 1 35 0 252 297 61 99 chr5 47400933 47401145 -152229005 + L2 LINE L2 2807 3010 -262 235 306 16 0 chr5 47401301 47401363 -152228787 + L2 LINE L2 3208 3270 -2 868 252 117 58 chr5 47402812 47403171 -152226979 - MLT1J1 LTR MaLR -24 422 37 2226 137 2 49 chr5 47403171 47403580 -152226570 - MLT1B LTR MaLR 0 390 1 868 252 117 58 chr5 47403580 47403613 -152226537 - MLT1J1 LTR MaLR -409 37 7 384 293 157 7 chr5 47403676 47403823 -152226327 + MIR SINE MIR 20 188 -74 2285 129 19 11 chr5 47405577 47405949 -152224201 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr5 47406510 47406532 -152223618 + AT_rich Low_complexity Low_complexity 1 22 0 183 146 0 146 chr5 47407268 47407323 -152222827 + L2 LINE L2 3267 3313 0 225 127 16 32 chr5 47408126 47408189 -152221961 + (TA)n Simple_repeat Simple_repeat 2 63 0 207 208 39 13 chr5 47408868 47408945 -152221205 + (TA)n Simple_repeat Simple_repeat 2 80 0 21 36 0 0 chr5 47410232 47410260 -152219890 + AT_rich Low_complexity Low_complexity 1 28 0 1628 163 29 7 chr5 47410260 47410536 -152219614 - AluJo SINE Alu -30 282 1 438 213 41 57 chr5 47410776 47410898 -152219252 + L2 LINE L2 3193 3312 -1 233 132 44 44 chr5 47412445 47412528 -152217622 + (TATATG)n Simple_repeat Simple_repeat 1 83 0 207 170 0 0 chr5 47412879 47412926 -152217224 + (TA)n Simple_repeat Simple_repeat 1 47 0 318 289 0 0 chr5 47412926 47413016 -152217134 - L1MC4 LINE L1 -1339 6703 6614 2502 63 3 0 chr5 47413027 47413330 -152216820 - AluY SINE Alu -7 304 1 1673 149 0 47 chr5 47413616 47413892 -152216258 - AluJb SINE Alu -25 287 25 780 219 71 112 chr5 47415127 47415396 -152214754 - MIR SINE MIR -1 261 4 2206 105 0 3 chr5 47418612 47418906 -152211244 + AluSx SINE Alu 1 293 -19 341 371 52 16 chr5 47419860 47420068 -152210082 + MIR SINE MIR 14 232 -30 2042 141 3 0 chr5 47420991 47421288 -152208862 + AluSx SINE Alu 1 298 -14 4062 186 46 2 chr5 47421293 47422134 -152208016 - MER63C DNA MER1_type -52 878 1 1858 103 128 3 chr5 47422661 47422982 -152207168 + MER46B DNA MER2_type 1 236 0 805 112 26 0 chr5 47423478 47423594 -152206556 + FLAM_C SINE Alu 1 119 -24 29 60 0 0 chr5 47423594 47423644 -152206506 + AT_rich Low_complexity Low_complexity 1 50 0 202 346 59 44 chr5 47424436 47424572 -152205578 - L2 LINE L2 -19 3253 3116 184 373 0 0 chr5 47424839 47424898 -152205252 + L2 LINE L2 3203 3261 -11 2319 100 0 0 chr5 47425174 47425473 -152204677 + AluSx SINE Alu 5 303 -9 1848 239 29 77 chr5 47425708 47426372 -152203778 - L1ME LINE L1 -5433 637 6 2222 109 3 0 chr5 47426766 47427059 -152203091 + AluSg1 SINE Alu 1 294 -15 376 222 183 6 chr5 47427332 47427512 -152202638 - L1ME4a LINE L1 -274 5847 5636 1783 154 146 8 chr5 47427854 47428230 -152201920 - MSTA LTR MaLR 0 428 1 23 0 0 0 chr5 47428252 47428275 -152201875 + AT_rich Low_complexity Low_complexity 1 23 0 279 0 0 0 chr5 47428707 47428738 -152201412 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4827 20 0 4 chr5 47428738 47429300 -152200850 - L1PA2 LINE L1 -11 6144 5585 208 250 0 26 chr5 47429678 47429754 -152200396 + T-rich Low_complexity Low_complexity 1 74 0 752 126 42 0 chr5 47429929 47430048 -152200102 + AluJb SINE Alu 1 124 -188 265 290 37 19 chr5 47430168 47430275 -152199875 - L1ME4a LINE L1 -484 5637 5529 369 211 70 44 chr5 47430578 47430692 -152199458 - MIR SINE MIR -31 231 115 196 264 125 42 chr5 47430698 47430770 -152199380 + L2 LINE L2 3190 3267 -5 223 191 0 0 chr5 47431630 47431672 -152198478 + A-rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr5 47432117 47432140 -152198010 + (TTA)n Simple_repeat Simple_repeat 2 24 0 10086 64 15 28 chr5 47432148 47433527 -152196623 - SVA Other Other -17 1369 8 39114 59 2 8 chr5 47434173 47440351 -152189799 - L1PA5 LINE L1 -4 6150 11 2194 120 0 3 chr5 47440665 47440964 -152189186 + AluSx SINE Alu 1 298 -14 482 302 8 0 chr5 47443038 47443164 -152186986 + MIR3 SINE MIR 3 129 -79 287 297 65 26 chr5 47443390 47443545 -152186605 + MER20B DNA MER1_type 7 167 -616 237 306 211 25 chr5 47443903 47444338 -152185812 - L2 LINE L2 -817 2497 1982 245 106 0 21 chr5 47444338 47444385 -152185765 + (GA)n Simple_repeat Simple_repeat 1 46 0 2241 126 73 45 chr5 47444800 47445222 -152184928 - Tigger2a DNA MER2_type 0 434 1 209 232 14 29 chr5 47445811 47445880 -152184270 + CT-rich Low_complexity Low_complexity 2 69 0 34 0 0 0 chr5 47446809 47446843 -152183307 + AT_rich Low_complexity Low_complexity 1 34 0 2300 99 0 0 chr5 47447925 47448227 -152181923 + AluY SINE Alu 5 306 -5 2223 113 0 10 chr5 47448332 47448642 -152181508 - AluSq SINE Alu -6 307 1 27 29 0 0 chr5 47448944 47448978 -152181172 + AT_rich Low_complexity Low_complexity 1 34 0 2253 119 16 0 chr5 47449148 47449451 -152180699 - AluSx SINE Alu -2 310 3 192 77 0 0 chr5 47449906 47449932 -152180218 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 379 244 196 84 chr5 47453746 47453971 -152176179 - MIR SINE MIR -11 251 2 1532 170 94 3 chr5 47455088 47455418 -152174732 + MLT1D LTR MaLR 1 360 -145 5555 132 31 10 chr5 47455428 47456669 -152173481 - L1PB1 LINE L1 0 6151 4888 2969 126 19 0 chr5 47456669 47457207 -152172943 + L1PBa LINE L1 1761 2308 -4555 782 145 6 66 chr5 47457210 47457376 -152172774 + MLT1D LTR MaLR 350 505 0 396 0 0 0 chr5 47458082 47458126 -152172024 + (TG)n Simple_repeat Simple_repeat 2 45 0 2144 107 0 14 chr5 47458126 47458415 -152171735 - AluSx SINE Alu -27 285 1 626 221 47 70 chr5 47459268 47459333 -152170817 - L1MC4 LINE L1 -763 7279 7214 2351 96 3 0 chr5 47459333 47459635 -152170515 - AluSq SINE Alu -10 303 1 626 221 47 70 chr5 47459635 47459868 -152170282 - L1MC4 LINE L1 -828 7214 6988 5179 164 28 2 chr5 47461073 47461750 -152168400 - L1PB1 LINE L1 -1774 4372 3659 387 0 0 0 chr5 47461750 47461793 -152168357 + (TG)n Simple_repeat Simple_repeat 2 44 0 5179 164 28 2 chr5 47461793 47462107 -152168043 - L1PB1 LINE L1 -2487 3659 3355 262 269 15 0 chr5 47462325 47462392 -152167758 + L3 LINE CR1 864 931 -646 191 221 229 74 chr5 47462727 47462773 -152167377 + L3 LINE CR1 1183 1220 -357 1916 141 78 29 chr5 47462773 47463120 -152167030 - THE1B LTR MaLR 0 364 1 11494 102 11 1 chr5 47463122 47464683 -152165467 - THE1B-int LTR MaLR -2 1578 1 1961 107 42 139 chr5 47464683 47465086 -152165064 - THE1B LTR MaLR 0 364 1 191 221 229 74 chr5 47465086 47465157 -152164993 + L3 LINE CR1 1219 1323 -254 246 128 0 0 chr5 47465201 47465240 -152164910 + (CA)n Simple_repeat Simple_repeat 2 40 0 27 87 0 0 chr5 47465271 47465340 -152164810 + AT_rich Low_complexity Low_complexity 1 69 0 3010 131 111 30 chr5 47465340 47465898 -152164252 + MER6A DNA MER2_type 3 605 0 319 267 11 11 chr5 47465945 47466035 -152164115 - L1MC4 LINE L1 -1339 6703 6614 214 282 188 12 chr5 47466038 47466123 -152164027 + L3 LINE CR1 1398 1497 -80 189 0 0 0 chr5 47466139 47466160 -152163990 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 240 250 0 0 chr5 47466164 47466216 -152163934 - L2 LINE L2 -21 3292 3241 2259 123 0 0 chr5 47466473 47466773 -152163377 - AluSx SINE Alu -12 300 1 4917 139 38 18 chr5 47468225 47469061 -152161089 - L1PA16 LINE L1 -6 6160 5292 198 0 0 0 chr5 47469061 47469083 -152161067 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 4917 139 38 18 chr5 47469083 47469367 -152160783 - L1PA16 LINE L1 -874 5292 5015 315 303 56 63 chr5 47469468 47469610 -152160540 + MIR SINE MIR 3 143 -65 258 81 0 0 chr5 47472889 47472926 -152157224 + (TG)n Simple_repeat Simple_repeat 2 38 0 33 56 0 0 chr5 47473174 47473228 -152156922 + AT_rich Low_complexity Low_complexity 1 54 0 27 87 0 0 chr5 47473500 47473569 -152156581 + AT_rich Low_complexity Low_complexity 1 69 0 4377 38 2 0 chr5 47473731 47474255 -152155895 + L1PA5 LINE L1 5629 6153 -1 750 159 31 0 chr5 47474346 47474509 -152155641 + L1MA8 LINE L1 6097 6264 -27 24 0 0 0 chr5 47474820 47474844 -152155306 + AT_rich Low_complexity Low_complexity 1 24 0 2920 3 0 0 chr5 47475535 47475849 -152154301 + AluYb8 SINE Alu 1 314 -4 269 138 50 0 chr5 47477755 47477835 -152152315 + (TA)n Simple_repeat Simple_repeat 1 84 0 255 152 0 0 chr5 47480684 47480730 -152149420 + CT-rich Low_complexity Low_complexity 3 48 0 681 188 31 23 chr5 47480735 47480863 -152149287 - FLAM_A SINE Alu -3 130 2 1205 241 127 40 chr5 47481443 47482050 -152148100 + MLT2F LTR ERVL 4 663 0 392 215 165 25 chr5 47482687 47482808 -152147342 + MLT1H1 LTR MaLR 418 555 0 1809 124 45 31 chr5 47483305 47483596 -152146554 - AluSx SINE Alu -17 295 1 502 246 80 17 chr5 47483684 47483859 -152146291 + L2 LINE L2 3128 3313 0 508 268 57 6 chr5 47484654 47484811 -152145339 + MER103 DNA DNA 2 166 0 905 103 0 0 chr5 47484956 47485073 -152145077 - Tigger1 DNA MER2_type 0 2418 2302 7937 50 1 4 chr5 47485076 47486837 -152143313 + L1P LINE L1 3 1886 -4260 762 209 106 91 chr5 47586840 47587094 -152043056 - L1M4b LINE L1 -6601 258 1 344 322 35 10 chr5 47587662 47587861 -152042289 + L1ME4a LINE L1 5622 5825 -296 23 68 0 0 chr5 47587877 47587921 -152042229 + AT_rich Low_complexity Low_complexity 1 44 0 276 250 43 35 chr5 47588238 47588354 -152041796 - L2 LINE L2 -1313 2001 1885 1030 250 122 24 chr5 47588663 47589269 -152040881 - L2 LINE L2 0 3313 2658 359 258 146 22 chr5 47589281 47589459 -152040691 + LTR33 LTR ERVL 12 211 -310 398 290 161 0 chr5 47592196 47592351 -152037799 + MIR SINE MIR 76 255 -7 1364 165 86 16 chr5 47592704 47592959 -152037191 + MSTA LTR MaLR 156 428 0 8826 155 9 37 chr5 47592961 47594585 -152035565 + MSTA-int LTR MaLR 3 1580 0 1775 169 158 11 chr5 47594585 47594958 -152035192 + MSTA LTR MaLR 1 428 0 284 282 128 26 chr5 47595061 47595217 -152034933 - MLT1I LTR MaLR -46 363 192 5152 120 13 3 chr5 47595267 47600309 -152029841 - L1PA8 LINE L1 -2 6170 999 190 189 68 68 chr5 47600416 47600490 -152029660 + L3 LINE CR1 430 503 -1074 2239 101 0 0 chr5 47602438 47602744 -152027406 - AluY SINE Alu -5 306 1 5428 121 27 27 chr5 47603527 47604584 -152025566 - L1PA15 LINE L1 -1 6164 5103 1159 127 46 51 chr5 47604584 47604821 -152025329 + THE1C LTR MaLR 140 375 0 9059 159 9 37 chr5 47604821 47606446 -152023704 + THE1C-int LTR MaLR 1 1580 0 1737 142 48 46 chr5 47606453 47606826 -152023324 + THE1C LTR MaLR 2 375 0 10283 198 35 9 chr5 47606826 47608945 -152021205 - L1PA15 LINE L1 -1147 4999 2819 369 0 0 0 chr5 47608945 47608986 -152021164 + (TG)n Simple_repeat Simple_repeat 2 42 0 10283 198 35 9 chr5 47608986 47609089 -152021061 - L1PA15 LINE L1 -3327 2819 2720 262 336 109 25 chr5 47609108 47609227 -152020923 - L2 LINE L2 -33 3239 3111 233 272 12 12 chr5 47609445 47609526 -152020624 - L1M4 LINE L1 -1350 4796 4716 373 352 50 19 chr5 47609710 47610028 -152020122 - L1M4 LINE L1 -1708 4438 4111 188 371 11 11 chr5 47610375 47610464 -152019686 - MIR SINE MIR -71 191 103 1533 144 22 0 chr5 47611112 47611382 -152018768 - L1MA3 LINE L1 0 6305 6030 191 340 195 47 chr5 47611385 47612027 -152018123 - L2 LINE L2 -575 2739 2003 315 260 19 65 chr5 47612029 47612216 -152017934 + L1MC/D LINE L1 3912 4093 -2053 402 265 0 20 chr5 47612296 47612398 -152017752 + MLT2E LTR ERVL 32 131 -497 475 313 60 30 chr5 47613061 47613262 -152016888 - MIR SINE MIR -37 225 19 261 336 0 0 chr5 47613365 47613502 -152016648 + L1MC/D LINE L1 5261 5397 -777 21 0 0 0 chr5 47614092 47614113 -152016037 + AT_rich Low_complexity Low_complexity 1 21 0 238 306 27 9 chr5 47614269 47614380 -152015770 + L1MC/D LINE L1 5692 5804 -2004 472 269 0 0 chr5 47614387 47614495 -152015655 + FAM SINE Alu 5 112 -73 412 313 34 28 chr5 47614629 47614808 -152015342 - Charlie8 DNA MER1_type -2142 275 96 6634 68 9 12 chr5 47615085 47616369 -152013781 + L1PA8 LINE L1 5045 6325 0 243 386 10 10 chr5 47616623 47616724 -152013426 + MIR SINE MIR 16 116 -92 22 0 0 0 chr5 47618106 47618128 -152012022 + AT_rich Low_complexity Low_complexity 1 22 0 671 219 105 64 chr5 47618473 47618816 -152011334 - L1ME2 LINE L1 -10 6154 5798 459 200 32 12 chr5 47618798 47618983 -152011167 - L1ME2 LINE L1 -704 5458 5220 * 277 296 31 19 chr5 47618990 47619149 -152011001 - L1ME2 LINE L1 -968 5178 5018 201 349 80 40 chr5 47619419 47619594 -152010556 - L2 LINE L2 0 3313 3132 1434 214 35 118 chr5 47620396 47620886 -152009264 - MLT1E LTR MaLR -2 591 144 2187 121 0 3 chr5 47620886 47621191 -152008959 + AluSx SINE Alu 2 305 -7 1434 214 35 118 chr5 47621191 47621215 -152008935 - MLT1E LTR MaLR -449 144 120 663 221 29 41 chr5 47621211 47621383 -152008767 - MLT1E LTR MaLR -423 170 1 * 452 284 74 23 chr5 47621785 47621961 -152008189 + MIR SINE MIR 10 194 -68 936 286 94 29 chr5 47622133 47622517 -152007633 - MLT1I LTR MaLR 0 409 1 262 291 178 27 chr5 47624397 47624655 -152005495 + L1MEd LINE L1 1371 1667 -4863 306 328 76 12 chr5 47624913 47625163 -152004987 + L1MEd LINE L1 2309 2574 -3966 180 111 0 0 chr5 47625309 47625336 -152004814 + (TG)n Simple_repeat Simple_repeat 2 28 0 3014 51 0 127 chr5 47625615 47626128 -152004022 + LTR7 LTR ERV1 1 448 -2 4209 236 111 12 chr5 47626204 47626221 -152003929 + L1MC4 LINE L1 6480 6494 -1548 1291 235 96 12 chr5 47626221 47626566 -152003584 + MLT1A2 LTR MaLR 1 374 0 4209 236 111 12 chr5 47626566 47627841 -152002309 + L1MC4 LINE L1 6494 7900 -142 317 291 79 36 chr5 47627856 47628021 -152002129 + L1MEd LINE L1 2556 2727 -3813 593 293 111 35 chr5 47628072 47628388 -152001762 + L1MEd LINE L1 3327 3618 -2922 8656 37 21 2 chr5 47628388 47629439 -152000711 + MER11C LTR ERVK 1 1071 0 593 293 111 35 chr5 47629439 47629458 -152000692 + L1MEd LINE L1 3618 3634 -2906 3170 80 5 16 chr5 47629458 47629907 -152000243 - MLT2A1 LTR ERVL 0 444 1 593 293 111 35 chr5 47629907 47630031 -152000119 + L1MEd LINE L1 3634 3822 -2718 197 299 30 15 chr5 47630340 47630407 -151999743 - L2 LINE L2 -8 3305 3238 192 374 141 0 chr5 47630654 47630753 -151999397 + MIR3 SINE MIR 13 125 -83 235 226 73 110 chr5 47631058 47631222 -151998928 + MER112 DNA MER1_type 4 161 -99 21 0 0 0 chr5 47631849 47631870 -151998280 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr5 47631962 47632005 -151998145 + AT_rich Low_complexity Low_complexity 1 43 0 28 38 0 19 chr5 47632048 47632067 -151998083 + AT_rich Low_complexity Low_complexity 1 19 -33 2636 184 38 12 chr5 47632067 47632567 -151997583 - MLT2B2 LTR ERVL -1 514 2 28 38 0 19 chr5 47632567 47632600 -151997550 + AT_rich Low_complexity Low_complexity 19 52 0 2175 70 0 4 chr5 47632644 47632917 -151997233 + AluY SINE Alu 1 272 -39 367 304 76 99 chr5 47633321 47633989 -151996161 + L2 LINE L2 2323 2975 -339 258 323 0 0 chr5 47634856 47634921 -151995229 + L2 LINE L2 3243 3307 -6 391 174 60 81 chr5 47635240 47635389 -151994761 - L1MD3 LINE L1 0 7995 7850 69 48 0 0 chr5 47635823 47635927 -151994223 + AT_rich Low_complexity Low_complexity 1 104 0 21 36 0 0 chr5 47636093 47636121 -151994029 + AT_rich Low_complexity Low_complexity 1 28 0 235 309 25 12 chr5 47636523 47636604 -151993546 + MIR SINE MIR 65 146 -62 21 36 0 0 chr5 47636809 47636837 -151993313 + AT_rich Low_complexity Low_complexity 1 28 0 253 221 39 0 chr5 47638176 47638279 -151991871 + (TA)n Simple_repeat Simple_repeat 1 107 0 2156 131 0 0 chr5 47638673 47638979 -151991171 - AluSx SINE Alu -5 307 2 224 204 0 0 chr5 47639190 47639239 -151990911 + A-rich Low_complexity Low_complexity 4 52 0 824 331 112 52 chr5 47640143 47640678 -151989472 + MLT1K LTR MaLR 12 578 -10 185 286 95 0 chr5 47640869 47640932 -151989218 - MIR3 SINE MIR -3 205 137 25 0 0 0 chr5 47641283 47641308 -151988842 + AT_rich Low_complexity Low_complexity 1 25 0 628 151 17 0 chr5 47641688 47641807 -151988343 - L1MA9 LINE L1 -1 6311 6191 1969 175 41 3 chr5 47641808 47642174 -151987976 - LTR26 LTR ERV1 0 603 224 463 283 60 72 chr5 47642174 47642425 -151987725 - L1M3b LINE L1 -5677 604 357 * 808 259 22 48 chr5 47642411 47642694 -151987456 - L1M3b LINE L1 -5861 420 1 221 0 35 0 chr5 47643000 47643029 -151987121 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2217 229 78 75 chr5 47643259 47644476 -151985674 + L1MC5 LINE L1 6475 7705 -256 2145 108 0 0 chr5 47644476 47644788 -151985362 + AluSx SINE Alu 7 318 0 2217 229 78 75 chr5 47644788 47644819 -151985331 + L1MC5 LINE L1 7705 7734 -227 943 206 115 41 chr5 47644829 47645194 -151984956 + MSTC LTR MaLR 1 428 0 432 241 53 59 chr5 47645195 47645382 -151984768 + L1MC5 LINE L1 7741 7926 -35 596 299 68 18 chr5 47645456 47645677 -151984473 + MIR SINE MIR 15 246 -16 235 286 116 18 chr5 47645927 47646039 -151984111 - L2 LINE L2 -7 3306 3184 263 333 63 6 chr5 47646687 47646846 -151983304 + MIR SINE MIR 83 250 -12 381 22 0 0 chr5 47648358 47648404 -151981746 + (CA)n Simple_repeat Simple_repeat 2 47 0 2142 120 0 0 chr5 47648520 47648812 -151981338 + AluSx SINE Alu 1 292 -20 653 346 39 15 chr5 47649183 47649726 -151980424 + L1ME LINE L1 5258 5813 -357 229 331 38 54 chr5 47650425 47650609 -151979541 - L2 LINE L2 0 3313 3133 315 289 0 12 chr5 47651380 47651463 -151978687 - MIR SINE MIR -67 141 60 1640 128 16 62 chr5 47651507 47651811 -151978339 - AluSx SINE Alu -22 290 1 1510 161 18 18 chr5 47651886 47652172 -151977978 + THE1C LTR MaLR 90 375 0 275 256 102 43 chr5 47652199 47652331 -151977819 - MIR SINE MIR -67 141 25 708 308 112 33 chr5 47652339 47652644 -151977506 + MER119 DNA MER1_type 5 333 -250 264 200 320 0 chr5 47652645 47652745 -151977405 + MER119 DNA MER1_type 438 569 -14 206 273 76 91 chr5 47653658 47653790 -151976360 + MER5B DNA MER1_type 6 136 -53 375 281 22 0 chr5 47653859 47653948 -151976202 + MER5A DNA MER1_type 22 112 -77 324 0 0 0 chr5 47655107 47655143 -151975007 + (T)n Simple_repeat Simple_repeat 1 36 0 1758 93 0 0 chr5 47655988 47656225 -151973925 - AluY SINE Alu -8 303 67 305 125 47 31 chr5 47656449 47656513 -151973637 + MADE1 DNA Mariner 16 80 0 2039 254 52 26 chr5 47656808 47657309 -151972841 + MLT1F LTR MaLR 29 542 0 24 0 0 0 chr5 47659977 47660001 -151970149 + AT_rich Low_complexity Low_complexity 1 24 0 1400 108 0 0 chr5 47660160 47660364 -151969786 + L1MA2 LINE L1 6101 6304 0 240 247 26 0 chr5 47660367 47660444 -151969706 + A-rich Low_complexity Low_complexity 4 82 0 190 160 40 0 chr5 47661104 47661154 -151968996 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 1566 173 58 7 chr5 47661726 47662073 -151968077 + L1MCa LINE L1 1331 1782 -4644 295 22 22 22 chr5 47663194 47663239 -151966911 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 225 211 18 18 chr5 47663588 47663645 -151966505 + (CATA)n Simple_repeat Simple_repeat 4 60 0 644 282 22 44 chr5 47663986 47664302 -151965848 - L1ME LINE L1 -389 5773 5465 2148 254 52 23 chr5 47664316 47665085 -151965065 + L1M4 LINE L1 3586 4376 -1770 202 213 64 0 chr5 47666116 47666163 -151963987 - L2 LINE L2 -2 3311 3262 316 242 22 44 chr5 47668449 47668540 -151961610 - L2 LINE L2 -32 3281 3193 3031 129 46 12 chr5 47669320 47669817 -151960333 - MER75 DNA T2_type 0 514 1 1326 87 0 0 chr5 47669852 47670035 -151960115 - AluY SINE Alu -5 306 124 2398 74 0 7 chr5 47671387 47671696 -151958454 + AluY SINE Alu 1 307 -4 21 71 0 0 chr5 47671905 47671947 -151958203 + AT_rich Low_complexity Low_complexity 1 42 0 184 429 0 0 chr5 47672573 47672657 -151957493 - L2 LINE L2 -317 2955 2872 261 212 45 0 chr5 47673150 47673216 -151956934 + L1ME3A LINE L1 5364 5432 -730 994 195 29 25 chr5 47673216 47673493 -151956657 + L1MA4 LINE L1 6012 6289 -11 180 0 0 0 chr5 47673775 47673795 -151956355 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 416 257 104 6 chr5 47673816 47673999 -151956151 + L1ME3A LINE L1 5749 5949 -221 1315 116 0 0 chr5 47674199 47674380 -151955770 - AluSc SINE Alu -14 295 115 380 246 97 23 chr5 47674806 47674981 -151955169 - Charlie7 DNA MER1_type -716 1896 1709 1009 247 174 10 chr5 47675003 47675387 -151954763 - Charlie7 DNA MER1_type -2074 538 92 4499 30 0 2 chr5 47675924 47676460 -151953690 - L1PA3 LINE L1 -3 6152 5618 2659 34 0 0 chr5 47676460 47676782 -151953368 + L1P LINE L1 1724 2045 -4101 442 232 32 0 chr5 47677039 47677134 -151953016 + MIR3 SINE MIR 100 197 -11 316 317 71 20 chr5 47677238 47677438 -151952712 - MIR SINE MIR -11 251 17 913 298 163 14 chr5 47678576 47679005 -151951145 - L2 LINE L2 -5 3308 2816 184 183 17 17 chr5 47679323 47679383 -151950767 + CT-rich Low_complexity Low_complexity 3 62 0 1368 189 107 0 chr5 47679401 47679719 -151950431 + L1MD1 LINE L1 5890 6241 -1 229 284 23 0 chr5 47680156 47680244 -151949906 - L1MC/D LINE L1 -2530 5512 5423 328 341 15 0 chr5 47680531 47680648 -151949502 - MER94 DNA DNA 0 134 13 1937 117 31 7 chr5 47680648 47680939 -151949211 - AluSc SINE Alu -11 298 1 328 341 15 0 chr5 47680939 47680953 -151949197 - MER94 DNA DNA -121 13 1 251 298 63 21 chr5 47680986 47681177 -151948973 + L1M4 LINE L1 4919 5117 -1029 367 305 80 13 chr5 47683661 47683812 -151946338 - LTR16A LTR ERVL -21 429 269 184 324 28 28 chr5 47684749 47684857 -151945293 - MIR SINE MIR -6 256 149 210 333 22 22 chr5 47684891 47684981 -151945169 - MIR SINE MIR -100 108 19 1999 116 3 3 chr5 47685244 47685528 -151944622 + AluSg SINE Alu 1 284 -26 587 14 14 0 chr5 47685536 47685608 -151944542 + (TAAAA)n Simple_repeat Simple_repeat 3 75 0 507 190 204 29 chr5 47686214 47686351 -151943799 + MER20 DNA MER1_type 59 219 0 286 299 93 0 chr5 47687042 47687139 -151943011 + MARNA DNA Mariner 468 573 -13 2233 192 28 21 chr5 47687717 47687965 -151942185 - MLT1C LTR MaLR 0 467 213 1574 205 36 25 chr5 47687965 47688326 -151941824 + MLT1A1 LTR MaLR 1 365 0 2233 192 28 21 chr5 47688326 47688504 -151941646 - MLT1C LTR MaLR -254 213 38 692 43 0 11 chr5 47692093 47692186 -151937964 + (TTCC)n Simple_repeat Simple_repeat 4 95 0 1349 187 39 35 chr5 47692207 47692517 -151937633 - AluJo SINE Alu 0 312 2 1995 103 0 4 chr5 47695975 47696278 -151933872 + AluSg SINE Alu 8 309 0 289 299 91 19 chr5 47697830 47697984 -151932166 - L2 LINE L2 -38 3275 3111 32 75 0 0 chr5 47698176 47698243 -151931907 + AT_rich Low_complexity Low_complexity 1 67 0 236 321 29 58 chr5 47698321 47698458 -151931692 - MER5B DNA MER1_type -44 134 2 874 220 16 0 chr5 47698654 47698840 -151931310 + MER5A DNA MER1_type 1 189 0 22 0 0 0 chr5 47699051 47699073 -151931077 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 47699350 47699371 -151930779 + AT_rich Low_complexity Low_complexity 1 21 0 818 265 31 5 chr5 47701279 47701502 -151928648 + MIR SINE MIR 7 235 -27 222 37 0 0 chr5 47702048 47702075 -151928075 + (CA)n Simple_repeat Simple_repeat 2 28 0 293 275 83 25 chr5 47702104 47702224 -151927926 - MIR SINE MIR -75 187 61 23 0 0 0 chr5 47702941 47702964 -151927186 + AT_rich Low_complexity Low_complexity 1 23 0 362 211 95 0 chr5 47703344 47703439 -151926711 + L1MD2 LINE L1 6256 6359 0 22 56 0 0 chr5 47704267 47704303 -151925847 + AT_rich Low_complexity Low_complexity 1 36 0 198 353 85 46 chr5 47704885 47705038 -151925112 - L2 LINE L2 -4 3268 3110 197 305 43 85 chr5 47705112 47705276 -151924874 - L2 LINE L2 -221 3051 2895 1550 157 8 23 chr5 47705792 47706151 -151923999 + MER1B DNA MER1_type 26 339 0 687 267 87 0 chr5 47706255 47706416 -151923734 - MER5A DNA MER1_type 0 189 15 223 297 70 86 chr5 47708758 47708886 -151921264 - MIR3 SINE MIR -1 207 82 16875 106 61 22 chr5 47709656 47710533 -151919617 + Charlie3 DNA MER1_type 1 842 -1864 1493 143 75 23 chr5 47710533 47710798 -151919352 - AluJb SINE Alu 0 312 34 16875 106 61 22 chr5 47710798 47711587 -151918563 + Charlie3 DNA MER1_type 842 1599 -1107 2069 132 0 3 chr5 47711587 47711883 -151918267 - AluSx SINE Alu -17 295 1 16875 106 61 22 chr5 47711883 47712819 -151917331 + Charlie3 DNA MER1_type 1599 2706 0 186 43 0 0 chr5 47713819 47713842 -151916308 + (TCTA)n Simple_repeat Simple_repeat 1 23 0 22 0 0 0 chr5 47714471 47714493 -151915657 + AT_rich Low_complexity Low_complexity 1 22 0 6734 21 24 0 chr5 47714888 47715693 -151914457 + L1PA4 LINE L1 5320 6143 -12 205 157 78 0 chr5 47715863 47715914 -151914236 + A-rich Low_complexity Low_complexity 1 55 0 1527 169 0 37 chr5 47716228 47716501 -151913649 - AluJb SINE Alu -21 291 29 1544 167 0 16 chr5 47718296 47718553 -151911597 + AluJo SINE Alu 1 253 -59 549 165 31 0 chr5 47718559 47718656 -151911494 + L1PB4 LINE L1 5831 5930 -226 891 192 13 0 chr5 47718661 47718817 -151911333 + AluJo SINE Alu 125 282 -30 1989 122 0 30 chr5 47718992 47719295 -151910855 - AluSg SINE Alu -16 294 1 376 307 27 40 chr5 47721995 47722145 -151908005 + MIR3 SINE MIR 58 205 -3 382 159 37 0 chr5 47722466 47722549 -151907601 - MER5A DNA MER1_type -99 90 4 238 223 32 0 chr5 47722649 47722743 -151907407 + GA-rich Low_complexity Low_complexity 3 99 0 26 30 0 0 chr5 47722880 47722913 -151907237 + AT_rich Low_complexity Low_complexity 1 33 0 229 282 27 64 chr5 47723165 47723275 -151906875 - L2 LINE L2 -36 3277 3172 190 281 0 18 chr5 47723383 47723440 -151906710 - MIR SINE MIR -103 159 104 383 21 0 0 chr5 47724314 47724361 -151905789 - L1PA6 LINE L1 -3 6151 6105 346 279 70 31 chr5 47726453 47726582 -151903568 + MIR SINE MIR 88 221 -41 246 275 202 28 chr5 47726996 47727174 -151902976 + L1ME4a LINE L1 3624 3832 -2314 2180 96 3 0 chr5 47727481 47727772 -151902378 + AluY SINE Alu 1 292 -19 312 254 120 62 chr5 47727785 47728159 -151901991 + L1ME4a LINE L1 5708 6103 -18 21 0 0 0 chr5 47729007 47729028 -151901122 + AT_rich Low_complexity Low_complexity 1 21 0 180 111 0 0 chr5 47730648 47730675 -151899475 + (A)n Simple_repeat Simple_repeat 1 27 0 205 238 0 32 chr5 47730684 47730747 -151899403 + GA-rich Low_complexity Low_complexity 2 62 0 22 0 0 0 chr5 47731975 47731997 -151898153 + AT_rich Low_complexity Low_complexity 1 22 0 1698 231 38 21 chr5 47733323 47733800 -151896350 - MER113 DNA MER1_type? -36 485 1 315 0 0 0 chr5 47734390 47734425 -151895725 + (TG)n Simple_repeat Simple_repeat 2 36 0 23 0 0 0 chr5 47734914 47734937 -151895213 + AT_rich Low_complexity Low_complexity 1 23 0 637 308 181 39 chr5 47735269 47736506 -151893644 + L2 LINE L2 1625 3039 -274 547 210 118 75 chr5 47736551 47736737 -151893413 + MER3 DNA MER1_type 16 209 0 227 283 0 0 chr5 47736694 47736747 -151893403 - MER3 DNA MER1_type -119 90 38 * 34 42 0 0 chr5 47736764 47736812 -151893338 + AT_rich Low_complexity Low_complexity 1 48 0 397 294 40 8 chr5 47736824 47736950 -151893200 + L2 LINE L2 3175 3304 -9 207 359 142 27 chr5 47737004 47737299 -151892851 + L2 LINE L2 2588 2916 -398 606 177 43 55 chr5 47738424 47738588 -151891562 + MER53 DNA DNA 2 163 -26 330 224 0 82 chr5 47739252 47739350 -151890800 - L1MC4 LINE L1 -1339 6703 6614 314 219 73 10 chr5 47739272 47739368 -151890782 + L1MC4 LINE L1 6614 6715 -1327 * 260 301 14 14 chr5 47739611 47739684 -151890466 + MIR SINE MIR 13 85 -177 240 86 0 0 chr5 47739858 47739893 -151890257 + (CA)n Simple_repeat Simple_repeat 2 36 0 23 54 0 0 chr5 47739987 47740024 -151890126 + AT_rich Low_complexity Low_complexity 1 37 0 334 258 72 36 chr5 47740092 47740286 -151889864 + L1ME4a LINE L1 5833 6033 -88 299 253 35 0 chr5 47740358 47740445 -151889705 + (TA)n Simple_repeat Simple_repeat 2 91 0 21 36 0 0 chr5 47740513 47740541 -151889609 + AT_rich Low_complexity Low_complexity 1 28 0 192 143 0 0 chr5 47741762 47741804 -151888346 + (CTA)n Simple_repeat Simple_repeat 1 42 0 256 219 85 0 chr5 47742588 47742670 -151887480 + MIR SINE MIR 109 197 -65 244 289 67 29 chr5 47742868 47742972 -151887178 + MIR SINE MIR 117 224 -38 235 203 31 0 chr5 47745276 47745340 -151884810 + (TA)n Simple_repeat Simple_repeat 1 66 0 345 279 29 0 chr5 47747027 47747131 -151883019 - MIR3 SINE MIR -17 191 85 748 210 45 35 chr5 47747309 47747509 -151882641 - MIR SINE MIR -59 203 2 228 318 47 19 chr5 47749390 47749497 -151880653 + MIR SINE MIR 74 183 -79 711 242 56 6 chr5 47749534 47749712 -151880438 - L1PB4 LINE L1 -12 6144 5958 309 263 175 9 chr5 47751922 47752036 -151878114 + MIR SINE MIR 35 167 -95 227 325 38 0 chr5 47752773 47752853 -151877297 + L2 LINE L2 3231 3313 0 711 230 54 0 chr5 47754251 47754399 -151875751 + MER20 DNA MER1_type 63 218 -1 233 298 0 64 chr5 47754485 47754579 -151875571 + MIR SINE MIR 122 209 -53 256 375 70 40 chr5 47754729 47755001 -151875149 + L3b LINE CR1 1289 1568 -15 219 69 0 0 chr5 47755943 47755972 -151874178 + (T)n Simple_repeat Simple_repeat 1 29 0 749 250 121 13 chr5 47757305 47757537 -151872613 + MIR SINE MIR 6 262 0 1648 192 17 7 chr5 47758485 47758787 -151871363 - AluJo SINE Alu -7 305 1 207 304 54 27 chr5 47759845 47759957 -151870193 - MER5A DNA MER1_type -68 121 7 2252 177 52 0 chr5 47760848 47761255 -151868895 + MSTC LTR MaLR 1 428 0 220 320 39 0 chr5 47761586 47761664 -151868486 - MIR SINE MIR -6 256 176 2152 185 21 58 chr5 47761834 47762352 -151867798 - MLT1D LTR MaLR 0 505 7 1346 237 39 48 chr5 47762375 47762792 -151867358 - MLT1D-int LTR MaLR -70 1665 881 3887 207 22 37 chr5 47762864 47763759 -151866391 - MLT1D-int LTR MaLR -484 887 6 1717 219 59 47 chr5 47763763 47764257 -151865893 - MLT1D LTR MaLR 0 505 6 291 319 62 19 chr5 47764336 47764496 -151865654 - MIR3 SINE MIR -36 172 6 275 268 41 10 chr5 47764844 47764941 -151865209 - MIR SINE MIR -85 177 78 260 393 113 32 chr5 47764973 47765380 -151864770 - L2 LINE L2 -26 3246 2807 278 264 35 0 chr5 47765549 47765636 -151864514 + MER94 DNA DNA 42 131 -3 385 269 70 91 chr5 47765899 47766141 -151864009 - MIR SINE MIR 0 262 26 255 31 0 0 chr5 47766312 47766344 -151863806 + (A)n Simple_repeat Simple_repeat 1 32 0 3312 106 21 0 chr5 47767488 47767970 -151862180 - Tigger4(Zombi) DNA MER2_type 0 2731 2240 1223 137 35 5 chr5 47767965 47768162 -151861988 - Tigger4(Zombi) DNA MER2_type -2528 203 1 * 2294 63 3 0 chr5 47768265 47768549 -151861601 - AluY SINE Alu -26 285 1 320 276 69 26 chr5 47769065 47769181 -151860969 + L2 LINE L2 3193 3313 0 209 329 0 0 chr5 47769187 47769260 -151860890 - MIR SINE MIR -61 201 129 21 36 0 0 chr5 47770096 47770124 -151860026 + AT_rich Low_complexity Low_complexity 1 28 0 1215 153 55 51 chr5 47770518 47770754 -151859396 + AluJo SINE Alu 1 237 -75 346 317 122 0 chr5 47774387 47774571 -151855579 + MIR SINE MIR 2 207 -55 248 128 0 21 chr5 47777135 47777182 -151852968 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 225 0 0 0 chr5 47777560 47777585 -151852565 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 227 246 0 18 chr5 47779366 47779423 -151850727 + G-rich Low_complexity Low_complexity 4 59 0 331 224 0 0 chr5 47780595 47780671 -151849479 + MER116 DNA Mariner 5 80 0 261 324 0 0 chr5 47782877 47782951 -151847199 - MIR3 SINE MIR -21 187 114 296 286 48 38 chr5 47784001 47784106 -151846044 - L2 LINE L2 -5 3308 3203 1518 241 82 120 chr5 47784685 47785603 -151844547 - L1MCc LINE L1 -5524 899 17 2311 74 0 3 chr5 47785686 47785983 -151844167 + AluY SINE Alu 1 296 -15 305 336 70 35 chr5 47786252 47786508 -151843642 - HAL1 LINE L1 -870 1637 1373 6558 35 1 0 chr5 47786675 47787937 -151842213 - L1PA3 LINE L1 -116 6039 4777 3927 35 0 2 chr5 47787936 47788425 -151841725 + L1PA3 LINE L1 4267 4754 -1392 * 686 270 78 9 chr5 47788425 47788655 -151841495 - L1MCc LINE L1 -5067 1356 1111 451 297 147 44 chr5 47788909 47789337 -151840813 + LTR33 LTR ERVL 1 472 -49 260 338 27 61 chr5 47790229 47790377 -151839773 - MIR3 SINE MIR -3 205 63 2228 102 57 28 chr5 47790796 47791150 -151839000 + THE1B LTR MaLR 1 364 0 25 75 0 0 chr5 47791422 47791475 -151838675 + AT_rich Low_complexity Low_complexity 1 53 0 360 0 0 0 chr5 47791542 47791582 -151838568 + (CA)n Simple_repeat Simple_repeat 2 41 0 2501 93 31 6 chr5 47793772 47794127 -151836023 + THE1B LTR MaLR 1 364 0 288 386 0 41 chr5 47794923 47795068 -151835082 - MIR3 SINE MIR -3 205 67 1793 212 18 83 chr5 47795707 47795979 -151834171 + MLT2B1 LTR ERVL 1 289 -231 1686 131 106 4 chr5 47795979 47796254 -151833896 + AluSx SINE Alu 1 303 -9 1793 212 18 83 chr5 47796254 47796496 -151833654 + MLT2B1 LTR ERVL 289 479 -41 224 75 0 25 chr5 47796496 47796536 -151833614 + (TA)n Simple_repeat Simple_repeat 2 40 0 1793 212 18 83 chr5 47796536 47796576 -151833574 + MLT2B1 LTR ERVL 479 520 0 300 262 112 9 chr5 47797077 47797184 -151832966 + MLT1L LTR MaLR 150 267 -348 259 232 51 65 chr5 47797362 47797500 -151832650 + L1M4 LINE L1 1518 1755 -4889 381 274 30 30 chr5 47797547 47797682 -151832468 + L1M4 LINE L1 4511 4645 -1999 * 415 154 33 11 chr5 47797674 47797765 -151832385 + L1MC1 LINE L1 2136 2228 -4416 * 4365 229 71 14 chr5 47797759 47797962 -151832188 + L1MC1 LINE L1 2627 2817 -4014 2215 87 6 46 chr5 47797962 47798285 -151831865 + AluSx SINE Alu 1 310 -2 4365 229 71 14 chr5 47798285 47799609 -151830541 + L1MC1 LINE L1 2817 4063 -2768 1883 147 16 10 chr5 47799609 47799915 -151830235 + AluSx SINE Alu 1 308 -4 4365 229 71 14 chr5 47799915 47800191 -151829959 + L1MC1 LINE L1 4063 4322 -2509 204 40 0 0 chr5 47800191 47800216 -151829934 + (CA)n Simple_repeat Simple_repeat 2 26 0 4365 229 71 14 chr5 47800216 47801043 -151829107 + L1MC1 LINE L1 4322 5100 -1731 4365 154 23 24 chr5 47801043 47801583 -151828567 + L1MC1 LINE L1 6008 6548 -283 2254 70 0 3 chr5 47801583 47801867 -151828283 + AluY SINE Alu 20 302 -9 4365 154 23 24 chr5 47801867 47802151 -151827999 + L1MC1 LINE L1 6548 6831 0 4365 229 71 14 chr5 47802151 47802591 -151827559 + L1MC1 LINE L1 5100 6831 0 1524 317 55 16 chr5 47802887 47803656 -151826494 - L2 LINE L2 -152 3161 2363 567 316 48 19 chr5 47803657 47803866 -151826284 - L2 LINE L2 -1726 1588 1374 393 216 24 24 chr5 47803889 47804021 -151826129 + L1MC/D LINE L1 5600 5726 -428 1546 244 11 8 chr5 47805084 47805448 -151824702 + MLT1A1 LTR MaLR 1 365 0 538 286 58 75 chr5 47805598 47805906 -151824244 + LTR16A1 LTR ERVL 152 454 -3 777 289 58 43 chr5 47807724 47808070 -151822080 + MLT1J1 LTR MaLR 65 415 -31 495 334 190 12 chr5 47808708 47809194 -151820956 - L2 LINE L2 -7 3306 2736 874 158 0 0 chr5 47809214 47809347 -151820803 - AluJb SINE Alu -178 134 2 451 335 39 0 chr5 47809363 47809518 -151820632 - L2 LINE L2 -650 2664 2504 697 237 0 13 chr5 47809535 47809687 -151820463 - FAM SINE Alu 0 49 1 1750 289 54 11 chr5 47810003 47810525 -151819625 - MLT1H1 LTR MaLR -11 544 1 1369 207 160 12 chr5 47810541 47810884 -151819266 - MSTD LTR MaLR -2 394 1 2059 181 42 27 chr5 47811283 47811686 -151818464 + MLT2D LTR ERVL 3 422 -42 279 114 0 0 chr5 47811686 47811730 -151818420 + (CA)n Simple_repeat Simple_repeat 2 45 0 2059 181 42 27 chr5 47811730 47811774 -151818376 + MLT2D LTR ERVL 422 464 0 376 260 50 66 chr5 47812015 47812196 -151817954 + MER5B DNA MER1_type 1 178 0 234 0 0 0 chr5 47812904 47812930 -151817220 + (TTG)n Simple_repeat Simple_repeat 2 27 0 28 0 0 0 chr5 47814704 47814732 -151815418 + AT_rich Low_complexity Low_complexity 1 28 0 281 275 148 21 chr5 47815367 47815509 -151814641 - MER5A DNA MER1_type -18 166 1 32 0 0 0 chr5 47815597 47815629 -151814521 + AT_rich Low_complexity Low_complexity 1 32 0 544 248 58 0 chr5 47816632 47816769 -151813381 - MIR SINE MIR -26 236 92 383 178 0 0 chr5 47817579 47817652 -151812498 - MER53 DNA DNA -3 186 114 343 338 38 23 chr5 47817766 47817899 -151812251 - L2 LINE L2 0 3313 3179 21 0 0 0 chr5 47818324 47818345 -151811805 + AT_rich Low_complexity Low_complexity 1 21 0 2188 104 0 0 chr5 47818462 47818751 -151811399 + AluSq SINE Alu 1 289 -24 450 229 47 109 chr5 47819040 47819232 -151810918 + MIR3 SINE MIR 21 200 -8 * 453 300 143 32 chr5 47819198 47819605 -151810545 - L3 LINE CR1 -43 1534 1083 619 262 93 40 chr5 47819649 47819874 -151810276 - MIR SINE MIR -24 238 2 281 340 10 10 chr5 47819889 47819989 -151810161 - L3 LINE CR1 -504 1073 974 26 30 0 0 chr5 47820027 47820060 -151810090 + AT_rich Low_complexity Low_complexity 1 33 0 464 194 10 10 chr5 47821017 47821115 -151809035 + MER5A DNA MER1_type 9 106 -83 1386 175 48 8 chr5 47821311 47821563 -151808587 + AluJb SINE Alu 36 297 -15 401 301 70 52 chr5 47821609 47821838 -151808312 - MIR SINE MIR -7 255 23 187 333 0 0 chr5 47825098 47825152 -151804998 - MIR SINE MIR -72 136 83 414 79 0 0 chr5 47825172 47825235 -151804915 + (TG)n Simple_repeat Simple_repeat 2 64 0 491 349 101 17 chr5 47826087 47826385 -151803765 + MLT1I LTR MaLR 27 349 -60 393 344 43 21 chr5 47827727 47827913 -151802237 + MIR3 SINE MIR 13 202 -6 429 349 155 55 chr5 47828962 47829139 -151801011 - L2 LINE L2 -443 2871 2713 2643 184 11 2 chr5 47829139 47829602 -151800548 - MLT1C LTR MaLR 0 467 1 429 349 155 55 chr5 47829602 47830347 -151799803 - L2 LINE L2 -601 2713 1857 252 184 0 0 chr5 47833223 47833261 -151796889 - MER46C DNA MER2_type -10 328 291 471 113 0 0 chr5 47833262 47833333 -151796817 + (TA)n Simple_repeat Simple_repeat 1 71 0 615 307 40 15 chr5 47833594 47833796 -151796354 - MIR SINE MIR -55 207 1 886 73 28 34 chr5 47834025 47834049 -151796101 + (GAAA)n Simple_repeat Simple_repeat 1 200 0 886 73 28 34 chr5 47834049 47834227 -151795923 + (GAAA)n Simple_repeat Simple_repeat 1 177 0 583 310 147 16 chr5 47835961 47836390 -151793760 - L1M4 LINE L1 -2748 3398 2914 30 27 0 0 chr5 47836394 47836431 -151793719 + AT_rich Low_complexity Low_complexity 1 37 0 434 338 31 18 chr5 47836698 47836923 -151793227 - L1M4 LINE L1 -3609 2537 2310 28 0 0 0 chr5 47837969 47837997 -151792153 + AT_rich Low_complexity Low_complexity 1 28 0 251 286 105 8 chr5 47838160 47838293 -151791857 - HAL1 LINE L1 -742 1765 1620 1757 190 45 3 chr5 47838319 47838651 -151791499 + MER7A DNA MER2_type 2 345 -1 2355 161 26 14 chr5 47838655 47839083 -151791067 - Tigger2a DNA MER2_type -1 433 1 231 261 109 11 chr5 47839272 47839364 -151790786 + L1MEd LINE L1 1111 1211 -4908 1584 153 121 103 chr5 47840163 47840699 -151789451 - LTR49 LTR ERV1 -49 546 1 10094 169 66 100 chr5 47840699 47842757 -151787393 - LTR49-int LTR ERV1 0 6331 4204 2195 113 0 3 chr5 47842757 47843048 -151787102 - AluSx SINE Alu -22 290 1 10094 169 66 100 chr5 47843048 47844269 -151785881 - LTR49-int LTR ERV1 -2127 4204 1706 24 67 0 0 chr5 47845224 47845269 -151784881 + AT_rich Low_complexity Low_complexity 1 45 0 862 208 121 42 chr5 47845300 47845589 -151784561 - LTR49-int LTR ERV1 -5043 1288 977 1635 181 92 87 chr5 47845887 47846430 -151783720 - LTR49 LTR ERV1 -49 546 1 2322 168 15 8 chr5 47846582 47846975 -151783175 - MER61B LTR ERV1 -29 396 1 21045 114 24 11 chr5 47846975 47850172 -151779978 - MER61B-int LTR ERV1 0 5217 1978 1722 109 18 4 chr5 47850157 47850433 -151779717 - MER61B-int LTR ERV1 -3577 1640 1361 * 270 128 0 0 chr5 47850426 47850465 -151779685 - HUERS-P3b LTR ERV1 -3996 3422 3384 * 1910 111 102 50 chr5 47850462 47850824 -151779326 - HUERS-P3b LTR ERV1 -4370 847 467 296 256 44 22 chr5 47851225 47851315 -151778835 - HUERS-P3b LTR ERV1 -5125 92 1 2447 144 10 10 chr5 47851328 47851723 -151778427 - MER61B LTR ERV1 -30 395 1 1368 265 99 14 chr5 47851725 47852147 -151778003 + MER39 LTR ERV1 250 707 0 231 250 56 14 chr5 47852178 47852250 -151777900 + MIR3 SINE MIR 83 157 -51 308 280 27 0 chr5 47852716 47852791 -151777359 + MER91C DNA MER1_type 1 77 -63 2502 169 35 11 chr5 47853006 47853543 -151776607 - L1MA10 LINE L1 -2 6332 5783 358 304 34 83 chr5 47853967 47854233 -151775917 + MIR SINE MIR 9 261 -1 389 275 48 21 chr5 47854550 47854739 -151775411 - L1ME1 LINE L1 -5 6161 5968 704 202 108 9 chr5 47854784 47855007 -151775143 - L1M4 LINE L1 -3699 2945 2701 5367 136 11 0 chr5 47855008 47856111 -151774039 - L1PA15 LINE L1 -1 6815 5700 13039 256 52 13 chr5 47856113 47856796 -151773354 - L1PA15 LINE L1 -1241 5556 4901 1872 148 7 3 chr5 47856796 47857102 -151773048 + AluSx SINE Alu 1 307 0 13039 256 52 13 chr5 47857102 47859963 -151770187 - L1PA15 LINE L1 -1896 4901 2154 2190 85 3 60 chr5 47859963 47860282 -151769868 + AluSp SINE Alu 1 301 -12 13039 256 52 13 chr5 47860282 47860703 -151769447 - L1PA15 LINE L1 -4643 2154 1751 269 26 26 0 chr5 47860703 47860741 -151769409 + (CAG)n Simple_repeat Simple_repeat 1 39 0 13039 256 52 13 chr5 47860741 47861829 -151768321 - L1PA15 LINE L1 -5046 1751 1 358 283 78 51 chr5 47862021 47862494 -151767656 - L1M4 LINE L1 -4135 2690 2205 1159 288 100 30 chr5 47862537 47863535 -151766615 - L1M4 LINE L1 -4715 1931 875 2308 92 0 0 chr5 47863536 47863856 -151766294 - AluY SINE Alu 0 320 1 1827 179 74 12 chr5 47864271 47864689 -151765461 - LTR56 LTR ERV1 0 445 2 7542 197 49 43 chr5 47864817 47865429 -151764721 - LTR56-int LTR ERV1 -265 6146 5539 2200 127 47 8 chr5 47865429 47865790 -151764360 - THE1C LTR MaLR 0 375 1 7542 197 49 43 chr5 47865790 47867499 -151762651 - LTR56-int LTR ERV1 -872 5539 2191 1180 268 12 0 chr5 47867540 47867794 -151762356 - AluJo SINE Alu -55 257 1 6321 199 52 61 chr5 47867802 47868729 -151761421 - LTR49-int LTR ERV1 -2736 3595 2690 1988 137 7 7 chr5 47868729 47869028 -151761122 + AluSx SINE Alu 1 299 -13 6321 199 52 61 chr5 47869028 47869832 -151760318 - LTR49-int LTR ERV1 -3641 2690 1880 1580 145 19 54 chr5 47869829 47870146 -151760004 - LTR49-int LTR ERV1 -4673 1658 1353 * 341 188 40 40 chr5 47870251 47870352 -151759798 - LTR49-int LTR ERV1 -4949 1382 1282 376 242 0 0 chr5 47870354 47870420 -151759730 - tRNA-Glu-GAG tRNA tRNA -3 72 7 301 190 17 0 chr5 47870479 47870537 -151759613 - LTR49-int LTR ERV1 -5150 1181 1123 669 101 0 10 chr5 47870697 47870796 -151759354 + MER4A LTR ERV1 1 98 -566 1701 134 158 78 chr5 47870796 47871170 -151758980 + MER4A LTR ERV1 261 664 0 4000 97 18 5 chr5 47871844 47872402 -151757748 + MER61E LTR ERV1 1 565 -4 2043 132 84 14 chr5 47873037 47873453 -151756697 - LTR56 LTR ERV1 0 445 1 2119 93 7 32 chr5 47873846 47874156 -151755994 + AluSc SINE Alu 1 302 -7 187 354 42 10 chr5 47874180 47874276 -151755874 + MIR SINE MIR 73 171 -91 22 0 0 0 chr5 47875151 47875173 -151754977 + AT_rich Low_complexity Low_complexity 1 22 0 645 99 0 11 chr5 47875487 47875578 -151754572 - MER41C LTR ERV1 -464 90 1 5334 86 51 4 chr5 47875814 47876559 -151753591 + LTR17 LTR ERV1 1 780 0 356 285 32 114 chr5 47876697 47876943 -151753207 - MIR SINE MIR 0 262 37 35 0 0 0 chr5 47877601 47877636 -151752514 + AT_rich Low_complexity Low_complexity 1 35 0 259 366 0 0 chr5 47878014 47878096 -151752054 - L2 LINE L2 -1 3271 3190 294 215 0 51 chr5 47878213 47878292 -151751858 + MIR3 SINE MIR 82 156 -52 29 47 0 0 chr5 47878576 47878619 -151751531 + AT_rich Low_complexity Low_complexity 1 43 0 602 186 97 0 chr5 47878663 47878776 -151751374 + FLAM_C SINE Alu 1 124 -19 200 390 0 0 chr5 47879738 47879815 -151750335 - L3 LINE CR1 -58 1519 1443 386 317 24 16 chr5 47880006 47880129 -151750021 - MIR SINE MIR -73 189 66 316 312 126 22 chr5 47880354 47880585 -151749565 + MIR SINE MIR 8 262 0 194 343 185 0 chr5 47880628 47880774 -151749376 - L3 LINE CR1 -340 1237 1065 279 301 201 30 chr5 47880929 47881258 -151748892 - L3 LINE CR1 -632 945 561 182 234 39 13 chr5 47882422 47882499 -151747651 + L3b LINE CR1 1113 1191 -392 233 267 67 0 chr5 47882507 47882582 -151747568 - MLT1G LTR MaLR -16 574 495 384 296 13 26 chr5 47882751 47882903 -151747247 - MLT1H LTR MaLR -380 169 20 2202 101 3 10 chr5 47883586 47883882 -151746268 - AluY SINE Alu -17 294 1 22 94 0 0 chr5 47884669 47884733 -151745417 + AT_rich Low_complexity Low_complexity 1 64 0 1110 243 241 109 chr5 47884959 47885924 -151744226 + MER52A LTR ERV1 663 1755 0 22 35 0 0 chr5 47885949 47885978 -151744172 + AT_rich Low_complexity Low_complexity 1 29 0 299 280 203 0 chr5 47886035 47886153 -151743997 - MIR SINE MIR -119 143 2 4531 172 51 7 chr5 47886547 47886614 -151743536 - MER6 DNA MER2_type 0 865 802 1337 133 55 0 chr5 47886614 47886832 -151743318 + MER30 DNA MER1_type 1 230 0 4531 172 51 7 chr5 47886832 47887591 -151742559 - MER6 DNA MER2_type -63 802 3 848 168 95 16 chr5 47893683 47893873 -151736277 + MER3 DNA MER1_type 1 205 -4 21 36 0 0 chr5 47895415 47895443 -151734707 + AT_rich Low_complexity Low_complexity 1 28 0 746 269 22 11 chr5 47895636 47895818 -151734332 - MIR SINE MIR -53 209 26 2473 141 91 6 chr5 47896186 47896913 -151733237 + LTR1B LTR ERV1 1 826 0 5318 211 40 65 chr5 47896968 47898255 -151731895 + MLT-int LTR MaLR 481 1735 0 1487 194 22 22 chr5 47898323 47898642 -151731508 - L1 LINE L1 -1812 4334 4016 182 262 24 0 chr5 47899106 47899148 -151731002 + L2 LINE L2 3221 3263 -9 2268 91 0 3 chr5 47900719 47901017 -151729133 + AluSc SINE Alu 1 297 -12 235 282 82 0 chr5 47901046 47901131 -151729019 + MIR SINE MIR 63 154 -108 245 200 120 13 chr5 47901270 47901345 -151728805 - MIR SINE MIR -85 177 95 376 289 63 59 chr5 47902643 47902882 -151727268 - Charlie8 DNA MER1_type -2177 240 1 24 32 0 0 chr5 47903317 47903348 -151726802 + AT_rich Low_complexity Low_complexity 1 31 0 191 232 134 98 chr5 47903385 47903497 -151726653 - MIR SINE MIR -82 180 65 238 356 87 0 chr5 47903814 47903929 -151726221 - MIR3 SINE MIR 0 208 84 24 0 0 0 chr5 47903964 47903988 -151726162 + AT_rich Low_complexity Low_complexity 1 24 0 1651 160 185 14 chr5 47904032 47904394 -151725756 + MSTA LTR MaLR 1 424 -4 247 288 162 9 chr5 47904822 47904933 -151725217 - MIR SINE MIR -77 185 58 277 373 112 12 chr5 47907890 47908059 -151722091 + MER5A DNA MER1_type 2 187 -2 240 295 74 11 chr5 47908154 47908249 -151721901 + L2 LINE L2 3191 3291 -22 425 292 136 40 chr5 47908895 47909196 -151720954 - L1ME4a LINE L1 -150 6389 6060 508 268 211 24 chr5 47909210 47909423 -151720727 - MIR SINE MIR 0 262 10 239 301 85 20 chr5 47910023 47910176 -151719974 - L1ME4a LINE L1 -1909 4655 4493 235 352 83 9 chr5 47910246 47910354 -151719796 - L2 LINE L2 -1 3312 3197 817 268 121 57 chr5 47910458 47910961 -151719189 - L1ME4a LINE L1 -2428 4136 3667 1939 179 0 0 chr5 47910961 47911273 -151718877 - AluJb SINE Alu 0 312 1 817 268 121 57 chr5 47911273 47912025 -151718125 - L1ME4a LINE L1 -2897 3667 2800 351 209 73 18 chr5 47912036 47912146 -151718004 + MER77 LTR ERV1 443 558 -47 434 220 82 82 chr5 47912158 47912317 -151717833 - MLT1D LTR MaLR -258 247 89 962 228 43 48 chr5 47912372 47913632 -151716518 - L1ME4a LINE L1 -5142 903 1 544 283 71 5 chr5 47913679 47913891 -151716259 - L1MEc LINE L1 -3400 3448 3223 * 1079 247 82 16 chr5 47913884 47914337 -151715813 - L1MEc LINE L1 -4160 2869 2387 2051 107 4 0 chr5 47914382 47914662 -151715488 - AluSc SINE Alu -28 281 1 237 250 133 39 chr5 47914664 47914792 -151715358 - L1MEc LINE L1 -4312 2537 2398 1177 150 34 39 chr5 47914932 47915139 -151715011 + AluJb SINE Alu 88 293 -19 566 297 116 7 chr5 47915139 47915563 -151714587 - L1MEc LINE L1 -5101 1747 1278 780 26 0 80 chr5 47915576 47915689 -151714461 - L1PA2 LINE L1 0 6155 6052 811 272 59 95 chr5 47916625 47917354 -151712796 - L1MC4 LINE L1 -3 8039 7236 5931 144 9 29 chr5 47917726 47918242 -151711908 - L1PB1 LINE L1 -5 6146 5621 4125 77 108 46 chr5 47918242 47918890 -151711260 + LTR12 LTR ERV1 1 688 0 5931 144 9 29 chr5 47918890 47919961 -151710189 - L1PB1 LINE L1 -530 5621 4597 288 126 39 48 chr5 47920087 47920190 -151709960 + GA-rich Low_complexity Low_complexity 1 102 0 341 301 28 42 chr5 47920549 47920692 -151709458 - MARNA DNA Mariner -203 383 243 1733 176 0 16 chr5 47921088 47921395 -151708755 - AluJo SINE Alu -10 302 1 296 290 84 38 chr5 47921495 47921626 -151708524 - L2 LINE L2 -5 3308 3172 250 241 11 35 chr5 47921758 47921845 -151708305 - MIR3 SINE MIR -15 193 109 700 297 53 58 chr5 47921982 47922028 -151708122 - LTR16C LTR ERVL -14 477 432 1552 170 50 18 chr5 47922028 47922310 -151707840 - AluJo SINE Alu -21 291 1 700 297 53 58 chr5 47922310 47922643 -151707507 - LTR16C LTR ERVL -59 432 100 199 77 26 26 chr5 47923352 47923391 -151706759 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 207 174 0 145 chr5 47923746 47923815 -151706335 + MIR3 SINE MIR 108 166 -42 26 50 0 0 chr5 47924969 47925009 -151705141 + AT_rich Low_complexity Low_complexity 1 40 0 2258 65 41 3 chr5 47925474 47925768 -151704382 + AluY SINE Alu 1 305 -6 365 282 101 34 chr5 47925791 47925940 -151704210 - MIR3 SINE MIR -41 167 9 192 336 124 9 chr5 47928903 47929016 -151701134 + L2 LINE L2 3107 3232 -40 428 314 92 0 chr5 47929463 47929616 -151700534 + MIR3 SINE MIR 36 202 -6 194 250 44 15 chr5 47929725 47929793 -151700357 - MIR3 SINE MIR -29 179 110 251 322 70 35 chr5 47930134 47930249 -151699901 + L3 LINE CR1 25 143 -1434 301 303 30 10 chr5 47930409 47930508 -151699642 - MIR3 SINE MIR -5 203 103 2541 149 31 2 chr5 47931294 47931710 -151698440 + MSTC LTR MaLR 1 428 0 6235 87 19 8 chr5 47932376 47933491 -151696659 + L1PA10 LINE L1 5067 6167 -1 254 143 20 0 chr5 47934810 47934859 -151695291 + CT-rich Low_complexity Low_complexity 2 51 0 351 0 0 0 chr5 47934860 47934899 -151695251 + (TG)n Simple_repeat Simple_repeat 2 40 0 219 83 0 28 chr5 47934944 47934980 -151695170 + MER5B DNA MER1_type 64 98 -80 2016 108 20 7 chr5 47935122 47935418 -151694732 - AluSq SINE Alu -13 300 1 1779 300 57 63 chr5 47935483 47936469 -151693681 + L2 LINE L2 674 1653 -1661 5076 189 43 27 chr5 47986472 47987786 -151642364 + L1PA13 LINE L1 1239 2585 -4212 180 0 0 0 chr5 47987887 47987907 -151642243 + (A)n Simple_repeat Simple_repeat 1 20 0 21 57 0 0 chr5 47988282 47988317 -151641833 + AT_rich Low_complexity Low_complexity 1 35 0 1355 79 28 28 chr5 47988835 47989051 -151641099 + AluY SINE Alu 1 216 -95 344 303 144 35 chr5 47989525 47989809 -151640341 + L1MC/D LINE L1 5254 5568 -2240 1856 153 14 0 chr5 47989809 47990125 -151640025 - AluSq SINE Alu 0 320 1 5488 132 19 9 chr5 47990150 47991049 -151639101 - L1PA13 LINE L1 -2 6161 5254 935 249 20 0 chr5 47991303 47991504 -151638646 + MER58A DNA MER1_type 2 206 -18 215 392 0 13 chr5 47991603 47991682 -151638468 - MIR SINE MIR -183 79 2 1448 266 62 18 chr5 47993567 47994019 -151636131 + LTR40a LTR ERVL 1 472 -47 180 0 0 0 chr5 47994443 47994463 -151635687 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1142 112 0 6 chr5 47994978 47995039 -151635111 + (GAAA)n Simple_repeat Simple_repeat 1 238 0 1142 112 0 6 chr5 47995039 47995218 -151634932 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 2050 123 0 13 chr5 47995506 47995807 -151634343 + AluSx SINE Alu 5 301 -11 195 162 0 0 chr5 47996141 47996178 -151633972 + (TCCA)n Simple_repeat Simple_repeat 4 40 0 251 269 0 43 chr5 47996418 47996461 -151633689 - MIR SINE MIR -66 196 153 1308 189 35 62 chr5 47996461 47996745 -151633405 - MLT1A1 LTR MaLR -2 363 90 1622 168 42 0 chr5 47996745 47997030 -151633120 - AluJb SINE Alu -15 297 1 1308 189 35 62 chr5 47997030 47997116 -151633034 - MLT1A1 LTR MaLR -275 90 3 251 269 0 43 chr5 47997116 47997165 -151632985 - MIR SINE MIR -109 153 108 21 57 0 0 chr5 47998839 47998874 -151631276 + AT_rich Low_complexity Low_complexity 1 35 0 4548 143 52 13 chr5 47999914 48000709 -151629441 + LTR1B LTR ERV1 1 826 0 355 339 87 10 chr5 48001013 48001208 -151628942 + MIR SINE MIR 11 220 -42 191 336 0 37 chr5 48001289 48001396 -151628754 + L2 LINE L2 1948 2050 -1264 2526 83 0 83 chr5 48001399 48001810 -151628340 - MER51B LTR ERV1 0 377 1 566 317 151 8 chr5 48001813 48002072 -151628078 + L2 LINE L2 2679 2974 -340 877 190 4 106 chr5 48002124 48002350 -151627800 - MER20 DNA MER1_type 0 219 17 222 366 30 38 chr5 48002747 48002878 -151627272 - L2 LINE L2 -7 3265 3136 1379 152 89 28 chr5 48003080 48003602 -151626548 + LTR36 LTR ERV1 2 611 0 201 176 0 0 chr5 48003603 48003637 -151626513 + (TA)n Simple_repeat Simple_repeat 2 35 0 545 252 81 0 chr5 48003941 48004064 -151626086 - MER58A DNA MER1_type 0 133 1 31 0 0 0 chr5 48005704 48005735 -151624415 + AT_rich Low_complexity Low_complexity 1 31 0 926 238 47 49 chr5 48006386 48006793 -151623357 + L1M4 LINE L1 4909 5314 -832 1650 271 61 63 chr5 48006810 48007478 -151622672 + L1MC4 LINE L1 6800 7467 -575 5788 103 40 0 chr5 48007478 48008409 -151621741 - L1PB1 LINE L1 0 6151 5222 1650 271 61 63 chr5 48008409 48008544 -151621606 + L1MC4 LINE L1 7467 7601 -441 619 292 82 34 chr5 48008792 48009674 -151620476 + L1ME LINE L1 548 1483 -4597 2185 221 62 113 chr5 48009686 48010982 -151619168 + L1M4 LINE L1 3477 4706 -1440 333 327 193 0 chr5 48011436 48011586 -151618564 - MER5A DNA MER1_type -1 188 10 866 198 97 0 chr5 48013741 48013968 -151616182 + L1MCa LINE L1 1266 1514 -4912 1536 115 47 24 chr5 48013988 48014241 -151615909 + MER1B DNA MER1_type 80 338 -1 787 314 68 28 chr5 48014243 48014806 -151615344 + L1MCa LINE L1 1697 2281 -4326 311 275 0 0 chr5 48014897 48014966 -151615184 - LTR16B LTR ERVL -395 69 1 208 304 0 0 chr5 48014969 48015025 -151615125 + (TG)n Simple_repeat Simple_repeat 1 56 0 229 278 56 44 chr5 48015096 48015186 -151614964 + L2 LINE L2 3191 3281 -32 652 159 16 8 chr5 48015205 48015331 -151614819 + L1MB8 LINE L1 6051 6177 -1 2011 121 7 0 chr5 48015739 48016019 -151614131 - AluSx SINE Alu -30 282 1 21 36 0 0 chr5 48017688 48017716 -151612434 + AT_rich Low_complexity Low_complexity 1 28 0 300 299 85 37 chr5 48017927 48018307 -151611843 - L2 LINE L2 -1078 2236 1867 317 299 124 34 chr5 48019026 48019203 -151610947 + MIR SINE MIR 14 206 -56 1218 244 76 15 chr5 48020601 48020960 -151609190 - MLT1E2 LTR MaLR 0 626 206 1911 222 22 10 chr5 48020960 48021624 -151608526 + MER49 LTR ERV1 1 923 0 695 262 93 13 chr5 48021658 48021883 -151608267 - MLT1E2 LTR MaLR -401 253 11 25 0 0 0 chr5 48021892 48021917 -151608233 + AT_rich Low_complexity Low_complexity 1 25 0 2064 160 10 0 chr5 48022311 48022623 -151607527 + 7SLRNA srpRNA srpRNA 2 316 -4 536 136 17 17 chr5 48022626 48022744 -151607406 + GA-rich Low_complexity Low_complexity 4 121 0 263 114 68 0 chr5 48022867 48022911 -151607239 - L1P LINE L1 -969 5177 5131 * 3035 181 32 5 chr5 48022908 48023505 -151606645 + L1P LINE L1 4482 5094 -1052 571 316 51 12 chr5 48023520 48023773 -151606377 + L1MC4a LINE L1 5594 5856 -1952 243 188 71 82 chr5 48024281 48024347 -151605803 - MER103 DNA DNA -64 102 36 1964 175 24 19 chr5 48024347 48024719 -151605431 - THE1C LTR MaLR 0 375 2 243 188 71 82 chr5 48024719 48024737 -151605413 - MER103 DNA DNA -130 36 19 1206 256 97 72 chr5 48026645 48027488 -151602662 + L1ME3A LINE L1 5254 6117 -53 28 71 0 0 chr5 48027537 48027593 -151602557 + AT_rich Low_complexity Low_complexity 1 56 0 282 106 0 0 chr5 48028139 48028186 -151601964 + (TC)n Simple_repeat Simple_repeat 1 47 0 23 0 0 0 chr5 48028473 48028496 -151601654 + AT_rich Low_complexity Low_complexity 1 23 0 803 224 113 14 chr5 48029263 48029563 -151600587 - MLT1A2 LTR MaLR 0 374 1 203 179 0 0 chr5 48030191 48030230 -151599920 + A-rich Low_complexity Low_complexity 1 39 0 24 32 0 0 chr5 48030571 48030602 -151599548 + AT_rich Low_complexity Low_complexity 1 31 0 4637 94 5 81 chr5 48030748 48031536 -151598614 - L1PA14 LINE L1 0 6161 5434 23 0 0 0 chr5 48032157 48032180 -151597970 + AT_rich Low_complexity Low_complexity 1 23 0 1175 195 52 57 chr5 48033799 48034168 -151595982 - L1MA9 LINE L1 -44 6268 5902 27 0 0 0 chr5 48036647 48036674 -151593476 + AT_rich Low_complexity Low_complexity 1 27 0 2587 103 11 0 chr5 48036880 48037240 -151592910 + THE1B LTR MaLR 1 364 0 3922 188 53 3 chr5 48037401 48038115 -151592035 + MER21B LTR ERV1 1 750 -113 1464 202 183 16 chr5 48038457 48038888 -151591262 + MLT1D LTR MaLR 1 503 -2 283 264 42 28 chr5 48039508 48039608 -151590542 + MLT1H LTR MaLR 149 324 -271 448 199 178 7 chr5 48039742 48039888 -151590262 + MLT1H LTR MaLR 375 545 -4 247 308 9 19 chr5 48039892 48039999 -151590151 + MLT1H-int LTR MaLR 1 106 -1629 35445 34 2 6 chr5 48040029 48045014 -151585136 + L1PA4 LINE L1 1011 5976 -179 304 266 89 65 chr5 48045384 48045553 -151584597 + MLT1H LTR MaLR 360 532 -17 1875 127 71 0 chr5 48046307 48046590 -151583560 - AluSg1 SINE Alu -4 305 3 535 253 158 6 chr5 48046883 48047041 -151583109 - MER5A DNA MER1_type -1 188 7 22 0 0 0 chr5 48047501 48047523 -151582627 + AT_rich Low_complexity Low_complexity 1 22 0 1917 130 81 26 chr5 48047785 48048130 -151582020 - THE1B LTR MaLR 0 364 1 23 0 0 0 chr5 48048177 48048200 -151581950 + AT_rich Low_complexity Low_complexity 1 23 0 196 153 51 29 chr5 48052184 48052321 -151577829 + (TA)n Simple_repeat Simple_repeat 2 141 0 1934 89 0 4 chr5 48052326 48052573 -151577577 - AluSc SINE Alu -63 246 1 228 289 0 0 chr5 48052660 48052712 -151577438 + (CA)n Simple_repeat Simple_repeat 1 52 0 660 297 136 39 chr5 48052818 48053178 -151576972 + L3 LINE CR1 1021 1415 -162 298 340 28 35 chr5 48053191 48053332 -151576818 - MIR3 SINE MIR -11 197 58 21 36 0 0 chr5 48054196 48054224 -151575926 + AT_rich Low_complexity Low_complexity 1 28 0 6691 130 29 10 chr5 48054578 48055918 -151574232 - L1MA2 LINE L1 0 6304 4932 674 298 32 20 chr5 48056144 48056392 -151573758 - MIR SINE MIR 0 262 12 21 0 0 0 chr5 48056796 48056817 -151573333 + AT_rich Low_complexity Low_complexity 1 21 0 198 191 0 0 chr5 48056853 48056895 -151573255 + (TG)n Simple_repeat Simple_repeat 1 42 0 654 273 97 33 chr5 48057302 48058174 -151571976 + L1ME1 LINE L1 4933 5947 -219 197 289 178 20 chr5 48058482 48058634 -151571516 + L2 LINE L2 2637 2812 -502 2103 102 0 4 chr5 48058906 48059180 -151570970 + AluSq SINE Alu 4 276 -37 229 103 51 64 chr5 48059184 48059262 -151570888 + GA-rich Low_complexity Low_complexity 2 78 0 474 308 174 4 chr5 48059283 48059559 -151570591 - L1ME4a LINE L1 -50 6071 5749 401 125 11 0 chr5 48059563 48059651 -151570499 + (TA)n Simple_repeat Simple_repeat 1 89 0 324 0 0 0 chr5 48060043 48060079 -151570071 + (TG)n Simple_repeat Simple_repeat 2 37 0 396 236 73 45 chr5 48060887 48061065 -151569085 + MER96B DNA MER1_type? 230 412 -5 211 341 153 18 chr5 48061567 48061790 -151568360 + L3 LINE CR1 714 966 -611 1909 250 21 5 chr5 48061840 48062326 -151567824 - MER77 LTR ERV1 0 605 56 201 74 0 0 chr5 48062326 48062353 -151567797 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1909 250 21 5 chr5 48062353 48062410 -151567740 - MER77 LTR ERV1 -549 56 1 385 269 128 20 chr5 48062410 48062555 -151567595 - MLT1L LTR MaLR -120 495 335 322 287 53 47 chr5 48062648 48062798 -151567352 - MLT1L LTR MaLR -464 151 1 458 252 7 56 chr5 48063394 48063469 -151566681 - MIR SINE MIR -126 136 70 4156 122 8 6 chr5 48063469 48064103 -151566047 - MER41B LTR ERV1 0 635 1 458 252 7 56 chr5 48064103 48064170 -151565980 - MIR SINE MIR -192 70 1 2050 133 3 0 chr5 48064266 48064560 -151565590 - AluSq SINE Alu -18 295 1 488 133 48 0 chr5 48064672 48064755 -151565395 - MER34C LTR ERV1 0 585 499 619 141 0 10 chr5 48064755 48064854 -151565296 + MER4A LTR ERV1 1 98 -566 * 924 164 27 25 chr5 48064850 48065078 -151565072 + MER4A LTR ERV1 257 543 -121 3393 138 34 2 chr5 48065080 48065616 -151564534 - MER41C LTR ERV1 -1 553 1 12426 112 29 6 chr5 48065616 48067852 -151562298 - MER41C-int LTR ERV1 0 5946 2856 2013 142 54 37 chr5 48067839 48068421 -151561729 - MER41-int LTR ERV1 -4057 3759 1081 * 599 133 124 9 chr5 48068412 48068525 -151561625 - MER41-int LTR ERV1 -5321 625 500 * 3603 115 0 2 chr5 48068525 48069037 -151561113 + MER9 LTR ERVK 1 511 0 4254 76 5 24 chr5 48069037 48069616 -151560534 + HERVK9 LTR ERVK 1 568 -5348 13516 62 1 1 chr5 48069617 48071292 -151558858 + HERVK9 LTR ERVK 1113 2786 -3130 1806 61 4 0 chr5 48071292 48071522 -151558628 + HERVK9 LTR ERVK 3711 3941 -1975 * 7564 98 3 16 chr5 48071509 48072587 -151557563 + HERVK9 LTR ERVK 4571 5634 -282 2248 126 13 12 chr5 48072612 48072965 -151557185 + HERVK9 LTR ERVK 5635 5916 0 3685 94 4 6 chr5 48072965 48073477 -151556673 + MER9 LTR ERVK 1 511 0 315 118 20 0 chr5 48073477 48073528 -151556622 - MER41-int LTR ERV1 -5441 505 454 865 129 17 17 chr5 48073652 48073830 -151556320 + GA-rich Low_complexity Low_complexity 3 180 0 919 207 6 0 chr5 48075048 48075217 -151554933 + AluJo SINE Alu 113 282 -30 23 0 0 0 chr5 48075217 48075240 -151554910 + AT_rich Low_complexity Low_complexity 1 23 0 360 269 50 42 chr5 48075311 48075430 -151554720 - MIR SINE MIR -123 139 20 396 0 0 0 chr5 48076121 48076165 -151553985 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 947 104 8 0 chr5 48076165 48076290 -151553860 - AluSg SINE Alu -184 126 1 449 265 77 33 chr5 48076796 48076977 -151553173 - LTR67 LTR ERVL -15 542 354 507 345 98 23 chr5 48077572 48078132 -151552018 - ERVL LTR ERVL -2973 2791 2190 279 0 0 0 chr5 48079329 48079360 -151550790 + (TG)n Simple_repeat Simple_repeat 2 32 0 243 204 0 0 chr5 48079690 48079744 -151550406 + (TA)n Simple_repeat Simple_repeat 1 54 0 1432 149 97 45 chr5 48079797 48080085 -151550065 + AluJo SINE Alu 1 303 -9 2090 110 13 20 chr5 48082832 48083131 -151547019 + AluSx SINE Alu 1 297 -15 23 33 0 0 chr5 48083181 48083211 -151546939 + AT_rich Low_complexity Low_complexity 1 30 0 2039 108 49 0 chr5 48085683 48085969 -151544181 + AluSg SINE Alu 1 300 -10 30 0 0 0 chr5 48086016 48086046 -151544104 + AT_rich Low_complexity Low_complexity 1 30 0 4078 188 34 17 chr5 48086214 48086982 -151543168 - LTR39 LTR ERV1 -2 781 1 262 331 57 100 chr5 48087026 48087307 -151542843 - L2 LINE L2 0 3272 3004 22 0 0 0 chr5 48087350 48087372 -151542778 + AT_rich Low_complexity Low_complexity 1 22 0 6586 74 0 0 chr5 48087527 48087557 -151542593 - L1PA8 LINE L1 -3 6169 6140 8312 51 1 0 chr5 48087557 48088522 -151541628 - LTR5 LTR ERVK -3 966 1 6586 74 0 0 chr5 48088522 48089534 -151540616 - L1PA8 LINE L1 -32 6140 5137 2839 109 2 0 chr5 48089534 48089955 -151540195 + L1PA8 LINE L1 4716 5137 -1009 194 208 21 21 chr5 48089996 48090044 -151540106 + MIR SINE MIR 95 142 -120 2206 110 0 10 chr5 48090606 48090907 -151539243 + AluSq SINE Alu 1 298 -15 624 153 0 16 chr5 48091911 48092094 -151538056 + (TA)n Simple_repeat Simple_repeat 1 180 0 21 36 0 0 chr5 48092196 48092224 -151537926 + AT_rich Low_complexity Low_complexity 1 28 0 434 200 21 0 chr5 48092288 48092383 -151537767 - MLT1F LTR MaLR -2 540 444 314 182 56 14 chr5 48092386 48092529 -151537621 + (TA)n Simple_repeat Simple_repeat 1 149 0 780 299 74 0 chr5 48092794 48093038 -151537112 - LTR16C LTR ERVL -5 486 225 316 262 154 5 chr5 48093396 48093617 -151536533 + L1M4 LINE L1 3697 3950 -2196 971 237 19 0 chr5 48093707 48093914 -151536236 - MLT1F1 LTR MaLR -2 565 355 216 67 0 0 chr5 48093970 48094000 -151536150 + (CA)n Simple_repeat Simple_repeat 1 30 0 1452 136 33 16 chr5 48094324 48094567 -151535583 - MER41C-int LTR ERV1 -5698 248 2 3087 143 55 0 chr5 48094653 48095178 -151534972 - MER41C LTR ERV1 0 554 1 799 151 0 16 chr5 48095178 48095304 -151534846 + MER4A LTR ERV1 541 664 0 2019 158 98 60 chr5 48095304 48095785 -151534365 - MER34C LTR ERV1 -83 502 4 2266 210 24 25 chr5 48096120 48096630 -151533520 - LTR22 LTR ERVK 0 509 1 29 47 0 0 chr5 48096796 48096839 -151533311 + AT_rich Low_complexity Low_complexity 1 43 0 2008 197 66 32 chr5 48098375 48098887 -151531263 + MER41B LTR ERV1 108 477 -9 325 274 72 91 chr5 48099246 48099337 -151530813 + L1ME LINE L1 5299 5390 -772 2167 141 0 35 chr5 48099337 48099685 -151530465 + MER1B DNA MER1_type 2 337 0 325 274 72 91 chr5 48099685 48099856 -151530294 + L1ME LINE L1 5390 5556 -606 1955 169 0 3 chr5 48099953 48100249 -151529901 - AluSx SINE Alu -17 295 1 1415 202 16 0 chr5 48101025 48101278 -151528872 + AluJo SINE Alu 5 261 -51 201 74 0 0 chr5 48101342 48101369 -151528781 + (TC)n Simple_repeat Simple_repeat 2 28 0 199 111 22 22 chr5 48101368 48101413 -151528737 + (TA)n Simple_repeat Simple_repeat 2 46 0 * 263 261 134 25 chr5 48103728 48103847 -151526303 + MIR SINE MIR 20 151 -111 261 286 14 0 chr5 48103932 48104002 -151526148 - MIR SINE MIR -53 209 139 472 189 60 58 chr5 48104201 48104475 -151525675 - MER20B DNA MER1_type -5 778 474 1806 189 34 5 chr5 48104550 48104937 -151525213 - L1MD1 LINE L1 0 6242 5845 676 154 56 28 chr5 48104952 48105095 -151525055 - L1MD1 LINE L1 -590 5769 5623 513 285 55 32 chr5 48105099 48105472 -151524678 - L1MD1 LINE L1 -1005 5141 4640 193 242 0 137 chr5 48105486 48105610 -151524540 + MIR SINE MIR 137 243 -19 762 292 72 36 chr5 48106101 48106406 -151523744 + L2 LINE L2 2996 3311 -2 916 305 78 41 chr5 48106742 48106886 -151523264 + L2 LINE L2 2545 2682 -631 1237 241 65 17 chr5 48106886 48107239 -151522911 + MLT1A2 LTR MaLR 1 370 -4 916 305 78 41 chr5 48107239 48107834 -151522316 + L2 LINE L2 2682 3308 -5 322 245 168 42 chr5 48107834 48107977 -151522173 + MIR3 SINE MIR 28 188 -20 195 379 136 0 chr5 48108725 48108828 -151521322 - L2 LINE L2 -10 3262 3146 231 114 0 0 chr5 48109886 48109921 -151520229 + (CCCGAA)n Simple_repeat Simple_repeat 4 38 0 385 344 28 56 chr5 48110654 48110869 -151519281 - MIR SINE MIR -4 258 50 23 0 0 0 chr5 48110943 48110966 -151519184 + AT_rich Low_complexity Low_complexity 1 23 0 953 207 15 10 chr5 48112139 48112337 -151517813 - MER58A DNA MER1_type 0 224 26 669 286 105 70 chr5 48114243 48114768 -151515382 - L2 LINE L2 -1 3312 2764 1889 157 0 3 chr5 48116094 48116393 -151513757 + AluSx SINE Alu 1 298 -14 264 302 93 0 chr5 48116604 48116690 -151513460 + L2 LINE L2 3217 3310 -3 2155 109 10 16 chr5 48116758 48117061 -151513089 - AluSp SINE Alu -12 301 1 607 331 93 22 chr5 48117307 48117663 -151512487 + L2 LINE L2 1844 2224 -1090 1930 205 14 6 chr5 48118105 48118461 -151511689 + MLT1A1 LTR MaLR 7 365 0 576 244 57 52 chr5 48119680 48119873 -151510277 + Charlie8 DNA MER1_type 72 265 -2152 1676 139 68 7 chr5 48120267 48120547 -151509603 - AluSx SINE Alu -15 297 1 1178 233 157 6 chr5 48121627 48121945 -151508205 - MLT1E LTR MaLR 0 593 228 1636 185 101 65 chr5 48122547 48123011 -151507139 + LTR42 LTR ERVL 15 495 0 260 331 72 22 chr5 48124454 48124593 -151505557 + MIR3 SINE MIR 37 182 -26 392 358 86 8 chr5 48124816 48125059 -151505091 - L3 LINE CR1 -2 1575 1314 9648 38 19 1 chr5 48125061 48127029 -151503121 - L1PA4 LINE L1 -3 6152 4166 257 283 98 33 chr5 48127390 48127482 -151502668 - MIR SINE MIR -8 254 157 401 313 56 28 chr5 48128516 48128660 -151501490 - MIR3 SINE MIR -44 164 17 1912 230 44 29 chr5 48129763 48130216 -151499934 - MLT1G LTR MaLR -116 474 15 508 340 118 22 chr5 48131989 48132404 -151497746 + L2 LINE L2 2245 2699 -615 189 0 0 0 chr5 48132583 48132604 -151497546 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 301 254 73 27 chr5 48132735 48132845 -151497305 + L2 LINE L2 3199 3313 0 406 321 36 36 chr5 48133380 48133545 -151496605 - L2 LINE L2 -1 3312 3148 2285 100 3 0 chr5 48134247 48134546 -151495604 + AluSx SINE Alu 3 302 -10 254 332 63 37 chr5 48135984 48136174 -151493976 - L3 LINE CR1 -891 686 492 219 316 38 75 chr5 48136328 48136461 -151493689 - MIR SINE MIR -109 153 26 24 53 0 0 chr5 48136490 48136528 -151493622 + AT_rich Low_complexity Low_complexity 1 38 0 310 279 23 0 chr5 48137443 48137529 -151492621 + MIR SINE MIR 126 213 -49 218 275 14 0 chr5 48137573 48137642 -151492508 - MIR SINE MIR -16 246 177 1908 136 72 31 chr5 48137943 48138303 -151491847 + THE1C LTR MaLR 1 375 0 9531 135 9 40 chr5 48138305 48139934 -151490216 + THE1C-int LTR MaLR 3 1580 0 1516 155 123 26 chr5 48139935 48140277 -151489873 + THE1C LTR MaLR 1 375 0 209 277 0 31 chr5 48141039 48141104 -151489046 + L2 LINE L2 3251 3313 0 219 114 0 0 chr5 48141159 48141194 -151488956 + (TG)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr5 48141444 48141472 -151488678 + AT_rich Low_complexity Low_complexity 1 28 0 293 297 22 0 chr5 48141840 48141931 -151488219 + MIR SINE MIR 109 201 -61 190 245 0 41 chr5 48142179 48142228 -151487922 + L2 LINE L2 3006 3052 -261 304 151 8 67 chr5 48142820 48142939 -151487211 + (TATAA)n Simple_repeat Simple_repeat 5 116 0 227 260 118 41 chr5 48143332 48143501 -151486649 - L1ME LINE L1 -215 5906 5725 222 91 0 0 chr5 48143821 48143854 -151486296 + (TG)n Simple_repeat Simple_repeat 2 34 0 1954 131 0 3 chr5 48144175 48144505 -151485645 + AluSx SINE Alu 1 329 0 2253 110 10 0 chr5 48145108 48145416 -151484734 + AluSx SINE Alu 1 311 -1 240 316 67 67 chr5 48145878 48146087 -151484063 + L2 LINE L2 2138 2346 -968 261 253 91 40 chr5 48146577 48146676 -151483474 - L2 LINE L2 0 3313 3210 221 287 85 0 chr5 48146778 48146872 -151483278 - L2 LINE L2 -340 2932 2831 1452 152 125 27 chr5 48146996 48147293 -151482857 - MER1B DNA MER1_type -1 338 13 22 0 0 0 chr5 48148727 48148749 -151481401 + AT_rich Low_complexity Low_complexity 1 22 0 1997 113 43 0 chr5 48149286 48149568 -151480582 + AluSx SINE Alu 2 295 -17 321 300 67 20 chr5 48151207 48151357 -151478793 - L1ME4a LINE L1 -5 6116 5960 22 0 0 0 chr5 48151552 48151574 -151478576 + AT_rich Low_complexity Low_complexity 1 22 0 287 314 0 0 chr5 48152396 48152482 -151477668 + CT-rich Low_complexity Low_complexity 5 90 0 2448 130 8 3 chr5 48152624 48152986 -151477164 - THE1B LTR MaLR 0 364 1 565 306 121 34 chr5 48154522 48155045 -151475105 - L1MEd LINE L1 -3379 2750 2183 270 263 77 32 chr5 48155102 48155258 -151474892 - L1MEd LINE L1 -4969 1150 988 1223 245 17 3 chr5 48155522 48155824 -151474326 - AluJo SINE Alu -6 306 1 710 62 21 0 chr5 48155857 48155977 -151474173 - AluSc SINE Alu 0 304 183 847 239 5 0 chr5 48156587 48156792 -151473358 - MER3 DNA MER1_type -2 207 2 246 59 0 0 chr5 48156899 48156933 -151473217 - L1P LINE L1 -2809 3337 3304 7376 40 1 0 chr5 48156934 48157854 -151472296 + L1PA4 LINE L1 5234 6154 -1 317 350 8 0 chr5 48157998 48158115 -151472035 + MIR SINE MIR 32 149 -113 2124 115 3 3 chr5 48158214 48158509 -151471641 - AluSp SINE Alu -18 295 1 201 374 13 39 chr5 48159607 48159762 -151470388 + L2 LINE L2 2491 2641 -673 194 323 43 43 chr5 48159767 48159860 -151470290 - L2 LINE L2 -38 3275 3183 281 340 27 53 chr5 48159930 48160118 -151470032 + MER5A DNA MER1_type 7 189 0 4321 167 33 40 chr5 48260557 48261557 -151368593 + L1MC1 LINE L1 5067 6057 -276 1305 156 82 31 chr5 48261558 48261814 -151368336 - MSTA LTR MaLR 0 428 160 2107 122 3 0 chr5 48261922 48262242 -151367908 - Harlequin LTR ERV1 -6575 321 1 3426 101 0 14 chr5 48262242 48262737 -151367413 - LTR2B LTR ERV1 0 490 3 1188 35 7 0 chr5 48262739 48262882 -151367268 + LTR2B LTR ERV1 345 488 -2 292 231 31 0 chr5 48262884 48262949 -151367201 - L1MEc LINE L1 -4389 2007 1941 1475 228 6 21 chr5 48263324 48263657 -151366493 + MLT1E2 LTR MaLR 299 626 0 541 86 95 6 chr5 48263828 48264165 -151365985 + (TA)n Simple_repeat Simple_repeat 1 366 0 1880 155 22 6 chr5 48264206 48264568 -151365582 + L1 LINE L1 3388 3755 -2391 273 172 0 0 chr5 48264577 48264641 -151365509 + (TA)n Simple_repeat Simple_repeat 2 65 0 210 37 0 0 chr5 48264695 48264722 -151365428 + (GA)n Simple_repeat Simple_repeat 2 28 0 534 170 13 0 chr5 48264762 48264867 -151365283 + L1P5 LINE L1 5566 5673 -483 293 50 136 0 chr5 48264867 48265007 -151365143 + (TA)n Simple_repeat Simple_repeat 2 160 0 * 490 94 28 66 chr5 48264983 48265164 -151364986 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 398 234 22 22 chr5 48265165 48265522 -151364628 + (TTATA)n Simple_repeat Simple_repeat 1 357 0 296 195 0 27 chr5 48265522 48265671 -151364479 + (TATAA)n Simple_repeat Simple_repeat 5 149 0 454 175 78 0 chr5 48265673 48265827 -151364323 + (TTATA)n Simple_repeat Simple_repeat 5 170 0 496 102 51 34 chr5 48265833 48266009 -151364141 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 306 93 112 0 chr5 48265995 48266156 -151363994 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 225 0 0 0 chr5 48266157 48266182 -151363968 + (GA)n Simple_repeat Simple_repeat 2 26 0 529 252 52 0 chr5 48266206 48266341 -151363809 + MLT1A1 LTR MaLR 178 319 -46 306 203 16 16 chr5 48266671 48266735 -151363415 - MER5B DNA MER1_type -114 64 1 180 286 22 33 chr5 48266745 48266836 -151363314 + L3 LINE CR1 1134 1223 -354 417 95 83 24 chr5 48266996 48267165 -151362985 + (TA)n Simple_repeat Simple_repeat 2 180 0 204 186 60 60 chr5 48267167 48267334 -151362816 + (TATG)n Simple_repeat Simple_repeat 3 169 0 363 133 75 40 chr5 48267475 48267648 -151362502 + (TA)n Simple_repeat Simple_repeat 1 179 0 430 82 74 21 chr5 48267675 48268068 -151362082 + (TA)n Simple_repeat Simple_repeat 1 413 0 46 0 0 0 chr5 48268068 48268114 -151362036 + AT_rich Low_complexity Low_complexity 1 46 0 356 253 11 39 chr5 48268118 48268300 -151361850 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 282 214 21 0 chr5 48268303 48268443 -151361707 + (TA)n Simple_repeat Simple_repeat 2 144 0 23 0 0 0 chr5 48268448 48268471 -151361679 + AT_rich Low_complexity Low_complexity 1 23 0 231 200 6 29 chr5 48268475 48268650 -151361500 + (TATATG)n Simple_repeat Simple_repeat 2 172 0 34 24 0 0 chr5 48268650 48268691 -151361459 + AT_rich Low_complexity Low_complexity 1 41 0 506 71 77 18 chr5 48268693 48268862 -151361288 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 549 91 50 34 chr5 48268848 48269195 -151360955 + (TTATA)n Simple_repeat Simple_repeat 1 352 0 232 241 54 9 chr5 48269201 48269313 -151360837 + (TA)n Simple_repeat Simple_repeat 1 117 0 2093 120 0 0 chr5 48269313 48269604 -151360546 - AluSg SINE Alu -19 291 1 602 198 30 30 chr5 48269609 48269776 -151360374 - L1P LINE L1 -2812 3334 3168 334 164 0 0 chr5 48269885 48269940 -151360210 - MSTA LTR MaLR -365 63 9 1496 151 40 7 chr5 48269940 48270218 -151359932 + L1MC1 LINE L1 6047 6333 0 269 275 38 12 chr5 48270750 48270830 -151359320 + MIR SINE MIR 75 156 -106 468 35 0 0 chr5 48271300 48271358 -151358792 + (TA)n Simple_repeat Simple_repeat 2 59 0 946 111 10 76 chr5 48271369 48271567 -151358583 - MER50 LTR ERV1 -64 670 486 196 263 53 53 chr5 48272411 48272468 -151357682 + MER5A DNA MER1_type 47 103 -86 259 280 175 35 chr5 48272992 48273135 -151357015 - L3 LINE CR1 -254 1323 1161 250 280 127 0 chr5 48273130 48273248 -151356902 - L2 LINE L2 -1 3312 3180 * 348 298 61 0 chr5 48273306 48273420 -151356730 - L3 LINE CR1 -550 1027 907 1761 128 0 15 chr5 48274986 48275251 -151354899 - AluSx SINE Alu -37 275 15 251 275 44 11 chr5 48275590 48275681 -151354469 - MLT1K LTR MaLR -7 581 488 2632 160 164 39 chr5 48275875 48277029 -151353121 + LTR12 LTR ERV1 18 714 0 796 280 100 38 chr5 48277157 48277496 -151352654 - MLT1H LTR MaLR 0 549 190 419 272 55 55 chr5 48278190 48278392 -151351758 - MIR3 SINE MIR -5 203 2 5602 40 1 0 chr5 48278768 48279449 -151350701 - L1PA5 LINE L1 -13 6141 5460 537 158 0 0 chr5 48279962 48280057 -151350093 + L1MB4 LINE L1 5995 6089 -91 1622 195 30 43 chr5 48280173 48280543 -151349607 - MLT1A1 LTR MaLR 0 365 1 234 149 0 0 chr5 48280711 48280758 -151349392 + L1MB3 LINE L1 6128 6174 -9 874 301 94 46 chr5 48281673 48282555 -151347595 + L2 LINE L2 2379 3313 0 221 329 99 31 chr5 48282681 48282842 -151347308 + L2 LINE L2 3142 3313 0 181 262 0 66 chr5 48283078 48283139 -151347011 + MIR3 SINE MIR 112 168 -40 299 354 23 8 chr5 48283202 48283332 -151346818 - MIR SINE MIR -124 138 7 1859 106 6 90 chr5 48283546 48283867 -151346283 + AluSx SINE Alu 1 294 -18 224 284 62 12 chr5 48284965 48285046 -151345104 + MIR SINE MIR 63 147 -115 23 0 0 0 chr5 48285345 48285368 -151344782 + AT_rich Low_complexity Low_complexity 1 23 0 1597 184 3 10 chr5 48286312 48286611 -151343539 - AluJo SINE Alu -15 297 1 6869 236 46 56 chr5 48287078 48287629 -151342521 - L1MCa LINE L1 -1193 5233 4678 297 68 0 0 chr5 48287629 48287673 -151342477 + (TA)n Simple_repeat Simple_repeat 1 44 0 6869 236 46 56 chr5 48287673 48287926 -151342224 - L1MCa LINE L1 -1748 4678 4424 1965 118 6 44 chr5 48287926 48288241 -151341909 - AluSc SINE Alu -6 303 1 6869 236 46 56 chr5 48288241 48290034 -151340116 - L1MCa LINE L1 -2002 4424 2849 189 0 0 0 chr5 48290034 48290055 -151340095 + (ATG)n Simple_repeat Simple_repeat 3 23 0 6869 236 46 56 chr5 48290055 48290585 -151339565 - L1MCa LINE L1 -3577 2849 2315 822 214 217 114 chr5 48290604 48290964 -151339186 - MER57B LTR ERV1 -6 397 1 1567 310 86 39 chr5 48290964 48291836 -151338314 - MER57-int LTR ERV1 -393 7144 6232 995 250 44 114 chr5 48292297 48292709 -151337441 - MER57-int LTR ERV1 -1330 6207 5825 3054 225 59 93 chr5 48293032 48294849 -151335301 - MER57-int LTR ERV1 -1498 3438 2202 1261 236 41 36 chr5 48294982 48295422 -151334728 - MER57-int LTR ERV1 -2968 1968 1527 1101 183 114 44 chr5 48295461 48295898 -151334252 - MER57-int LTR ERV1 -336 3001 1069 640 298 143 8 chr5 48296273 48296525 -151333625 - MER57-int LTR ERV1 -7249 288 3 3591 65 13 0 chr5 48296538 48296996 -151333154 - MER57-int LTR ERV1 -3081 3815 3352 2758 72 2 2 chr5 48296995 48297395 -151332755 - MER57-int LTR ERV1 -4322 2574 2175 * 1050 43 0 7 chr5 48297383 48297523 -151332627 - MER57-int LTR ERV1 -5186 1710 1572 * 3742 83 25 9 chr5 48297522 48298049 -151332101 - MER57-int LTR ERV1 -6042 854 320 893 214 15 0 chr5 48298149 48298355 -151331795 - L1P LINE L1 -2990 3156 2948 22 0 0 0 chr5 48298886 48298908 -151331242 + AT_rich Low_complexity Low_complexity 1 22 0 588 342 102 7 chr5 48299920 48300215 -151329935 - L2 LINE L2 -427 2887 2565 926 273 101 21 chr5 48300216 48300593 -151329557 + L1ME1 LINE L1 5756 6162 -4 834 307 77 22 chr5 48300610 48300972 -151329178 - L2 LINE L2 -789 2525 2144 294 29 0 0 chr5 48303243 48303278 -151326872 + (CA)n Simple_repeat Simple_repeat 2 36 0 2827 184 14 12 chr5 48303670 48304252 -151325898 + L1PB4 LINE L1 5572 6154 -2 355 310 148 19 chr5 48304552 48304707 -151325443 + MER5A DNA MER1_type 8 182 -7 378 352 104 14 chr5 48305015 48305379 -151324771 - L2 LINE L2 -931 2383 1987 494 353 36 30 chr5 48305394 48305509 -151324641 - LTR16C LTR ERVL 0 491 378 2726 85 3 0 chr5 48305509 48305863 -151324287 - THE1A LTR MaLR 0 355 1 494 353 36 30 chr5 48305863 48306050 -151324100 - LTR16C LTR ERVL -113 378 187 460 97 39 10 chr5 48306273 48306376 -151323774 + (TA)n Simple_repeat Simple_repeat 2 107 0 311 337 80 11 chr5 48306438 48306625 -151323525 - L2 LINE L2 -1427 1887 1688 * 1007 243 22 2 chr5 48306622 48306852 -151323298 + MIR SINE MIR 6 235 -27 223 347 78 52 chr5 48306912 48307180 -151322970 - L2 LINE L2 -1758 1556 1282 345 24 0 0 chr5 48307257 48307299 -151322851 + (CA)n Simple_repeat Simple_repeat 2 43 0 24 32 0 0 chr5 48307636 48307667 -151322483 + AT_rich Low_complexity Low_complexity 1 31 0 1338 124 36 0 chr5 48307858 48308052 -151322098 + AluSx SINE Alu 28 228 -84 314 146 0 0 chr5 48308052 48308100 -151322050 + AluSq/x SINE Alu 85 132 -170 1507 156 49 35 chr5 48308102 48308415 -151321735 + AluSq SINE Alu 1 317 0 28 29 0 0 chr5 48309131 48309166 -151320984 + AT_rich Low_complexity Low_complexity 1 35 0 26 64 0 0 chr5 48309326 48309373 -151320777 + AT_rich Low_complexity Low_complexity 1 47 0 27 0 0 0 chr5 48309474 48309501 -151320649 + AT_rich Low_complexity Low_complexity 1 27 0 30 0 0 0 chr5 48310008 48310038 -151320112 + AT_rich Low_complexity Low_complexity 1 30 0 1970 150 110 69 chr5 48310286 48310805 -151319345 - LTR49 LTR ERV1 -55 540 1 281 310 69 46 chr5 48310805 48311066 -151319084 - L2 LINE L2 -586 2728 2462 2108 151 42 31 chr5 48311273 48311698 -151318452 - MSTB1 LTR MaLR -2 430 1 459 287 139 5 chr5 48312142 48312344 -151317806 + HAL1 LINE L1 1575 1803 -704 291 188 38 38 chr5 48312510 48312590 -151317560 + HAL1 LINE L1 2073 2152 -355 36 77 0 0 chr5 48313052 48313130 -151317020 + AT_rich Low_complexity Low_complexity 1 78 0 249 241 0 103 chr5 48313834 48313921 -151316229 + L2 LINE L2 2309 2386 -928 205 200 40 0 chr5 48313938 48313988 -151316162 + L2 LINE L2 3219 3270 -2 * 719 233 41 0 chr5 48313981 48314127 -151316023 - MER5A DNA MER1_type -37 152 1 205 394 24 0 chr5 48314240 48314367 -151315783 - MIR3 SINE MIR -1 207 78 183 306 20 0 chr5 48314919 48314968 -151315182 + MIR SINE MIR 28 77 -131 312 271 164 71 chr5 48315185 48315325 -151314825 - MER5A DNA MER1_type -3 186 34 43429 44 1 2 chr5 48316908 48323061 -151307089 - L1PA3 LINE L1 -3 6152 9 2180 145 3 3 chr5 48323211 48323549 -151306601 + THE1C LTR MaLR 33 370 -5 10152 119 27 7 chr5 48323554 48325102 -151305048 + THE1C-int LTR MaLR 1 1580 0 2488 122 3 11 chr5 48325102 48325480 -151304670 + THE1C LTR MaLR 1 375 0 35 0 0 0 chr5 48325562 48325597 -151304553 + AT_rich Low_complexity Low_complexity 1 35 0 313 400 75 17 chr5 48325878 48326358 -151303792 + L2 LINE L2 2446 2953 -361 1757 144 16 42 chr5 48326901 48327213 -151302937 + AluSx SINE Alu 1 304 -8 3919 168 35 102 chr5 48327218 48327679 -151302471 - HSMAR2 DNA Mariner -1 1301 811 808 201 14 0 chr5 48327679 48327823 -151302327 - AluJb SINE Alu -21 291 146 3919 168 35 102 chr5 48327823 48328333 -151301817 - HSMAR2 DNA Mariner -491 811 262 375 222 0 0 chr5 48328462 48328534 -151301616 + HSMAR2 DNA Mariner 261 332 -970 * 1381 163 21 0 chr5 48328528 48328768 -151301382 - HSMAR2 DNA Mariner -1053 249 5 2086 127 0 7 chr5 48329222 48329521 -151300629 + AluSq SINE Alu 1 297 -16 280 344 31 31 chr5 48329724 48329948 -151300202 + L2 LINE L2 2611 2834 -480 266 331 161 0 chr5 48330156 48330286 -151299864 + L2 LINE L2 3158 3308 -5 358 242 11 33 chr5 48330801 48330892 -151299258 + L2 LINE L2 3224 3312 -1 339 325 89 41 chr5 48331582 48331853 -151298297 + L2 LINE L2 2984 3267 -46 1929 162 11 58 chr5 48332426 48332808 -151297342 + MLT1A1 LTR MaLR 1 364 -1 722 259 42 5 chr5 48333543 48333732 -151296418 + MIR SINE MIR 53 248 -14 187 294 0 0 chr5 48334764 48334815 -151295335 - MIR SINE MIR -3 259 209 987 151 6 0 chr5 48335499 48335658 -151294492 + L1M1 LINE L1 5430 5589 -716 5685 132 5 3 chr5 48335658 48336864 -151293286 + L1MA2 LINE L1 4855 6064 -240 2425 95 26 31 chr5 48336864 48337254 -151292896 + L1MA2 LINE L1 5911 6298 -6 246 219 0 0 chr5 48337587 48337651 -151292499 + (ATG)n Simple_repeat Simple_repeat 2 65 0 22 35 0 0 chr5 48338620 48338649 -151291501 + AT_rich Low_complexity Low_complexity 1 29 0 227 100 0 25 chr5 48338980 48339020 -151291130 + (TA)n Simple_repeat Simple_repeat 2 40 0 848 236 51 4 chr5 48339200 48339454 -151290696 + L1MD3 LINE L1 7730 7995 0 195 308 110 22 chr5 48339501 48339592 -151290558 + MIR SINE MIR 106 204 -58 993 179 85 12 chr5 48340081 48340327 -151289823 + L1MB4 LINE L1 5902 6165 -15 2786 156 91 98 chr5 48340647 48341384 -151288766 + MER44D DNA MER2_type 2 605 0 1854 138 62 49 chr5 48341459 48341844 -151288306 - MLT1B LTR MaLR 0 390 1 23 33 0 0 chr5 48342427 48342457 -151287693 + AT_rich Low_complexity Low_complexity 1 30 0 516 89 0 0 chr5 48343208 48343287 -151286863 - L1MA1 LINE L1 -4 6298 6220 25 31 0 0 chr5 48343478 48343510 -151286640 + AT_rich Low_complexity Low_complexity 1 32 0 22 94 0 0 chr5 48344549 48344613 -151285537 + AT_rich Low_complexity Low_complexity 1 64 0 2503 25 16 0 chr5 48344869 48345288 -151284862 - L1PA4 LINE L1 -591 5564 5141 4756 42 8 0 chr5 48345288 48345877 -151284273 + L1PA4 LINE L1 5560 6154 -1 1174 197 67 10 chr5 48346026 48346325 -151283825 - Charlie5 DNA MER1_type 0 2619 2304 432 289 9 0 chr5 48346433 48346547 -151283603 - MER3 DNA MER1_type -41 168 54 361 257 50 29 chr5 48346594 48346683 -151283467 + MIR SINE MIR 71 166 -96 1897 166 37 3 chr5 48346683 48347032 -151283118 + MER46B DNA MER2_type 1 236 0 361 257 50 29 chr5 48347032 48347082 -151283068 + MIR SINE MIR 166 213 -49 255 254 69 90 chr5 48348045 48348234 -151281916 + MIR SINE MIR 65 249 -13 543 259 15 0 chr5 48348929 48349060 -151281090 + MIR SINE MIR 130 262 0 362 250 19 9 chr5 48349811 48349919 -151280231 + L1ME3 LINE L1 5175 5283 -863 1485 254 77 79 chr5 48349922 48350741 -151279409 + L1ME3 LINE L1 5316 6132 -30 205 191 0 0 chr5 48350852 48350894 -151279256 + T-rich Low_complexity Low_complexity 1 42 0 41036 63 3 9 chr5 48350902 48357093 -151273057 - L1PA5 LINE L1 -1 6153 1 22 35 0 0 chr5 48357200 48357229 -151272921 + AT_rich Low_complexity Low_complexity 1 29 0 6193 100 25 5 chr5 48358290 48359440 -151270710 - L1PA12 LINE L1 -1 6167 5003 7900 149 10 3 chr5 48359440 48360780 -151269370 + L1P LINE L1 3484 4832 -1314 3939 197 24 35 chr5 48361089 48361126 -151269024 - L1MC3 LINE L1 -8 7777 7741 1945 186 59 5 chr5 48361126 48361534 -151268616 - MSTB1 LTR MaLR -2 430 1 3939 197 24 35 chr5 48361534 48362428 -151267722 - L1MC3 LINE L1 -44 7741 6857 915 159 0 0 chr5 48363583 48363815 -151266335 + CT-rich Low_complexity Low_complexity 1 232 0 2168 114 0 7 chr5 48364778 48365075 -151265075 - AluSg1 SINE Alu -11 298 4 226 357 14 0 chr5 48365377 48365447 -151264703 - L2 LINE L2 -1 3271 3201 389 311 23 0 chr5 48366305 48366437 -151263713 - MLT1J LTR MaLR -308 203 69 2617 91 9 0 chr5 48366459 48366809 -151263341 - THE1A LTR MaLR 0 355 3 39 0 0 0 chr5 48366817 48366856 -151263294 + AT_rich Low_complexity Low_complexity 1 39 0 235 245 21 53 chr5 48366875 48366969 -151263181 - L1ME LINE L1 -474 5647 5557 1381 159 132 29 chr5 48367007 48367347 -151262803 - THE1C LTR MaLR 0 375 1 1619 173 10 22 chr5 48367724 48368037 -151262113 - AluJb SINE Alu -3 309 1 226 213 0 38 chr5 48368052 48368132 -151262018 + T-rich Low_complexity Low_complexity 5 81 0 2049 160 18 41 chr5 48368740 48369134 -151261016 - Tigger2 DNA MER2_type 0 2718 2334 256 234 0 0 chr5 48369129 48369176 -151260974 - Tigger2 DNA MER2_type -2655 63 17 * 225 293 14 85 chr5 48369563 48369775 -151260375 - L1 LINE L1 -2419 3727 3531 339 316 0 38 chr5 48369861 48370019 -151260131 + MER5B DNA MER1_type 1 152 -26 21 0 0 0 chr5 48370019 48370040 -151260110 + AT_rich Low_complexity Low_complexity 1 21 0 3009 178 136 92 chr5 48370118 48370668 -151259482 - L1MC3 LINE L1 -14 7771 7247 256 232 24 37 chr5 48370668 48370750 -151259400 - MLT1F1 LTR MaLR -442 125 45 3009 178 136 92 chr5 48370750 48371124 -151259026 - L1MC3 LINE L1 -538 7247 6721 1478 184 11 28 chr5 48371124 48371406 -151258744 - MSTC LTR MaLR -151 277 1 2619 278 65 30 chr5 48371406 48372013 -151258137 - L1M4 LINE L1 -2054 4092 3507 3519 117 2 4 chr5 48372013 48372525 -151257625 + MER9 LTR ERVK 1 511 0 2619 278 65 30 chr5 48372525 48373296 -151256854 - L1M4 LINE L1 -2639 3507 2667 299 297 0 11 chr5 48374055 48374146 -151256004 - L2 LINE L2 -36 3277 3188 251 283 101 7 chr5 48374258 48374396 -151255754 - L2 LINE L2 -3144 170 20 382 331 6 45 chr5 48374453 48374610 -151255540 - MIR SINE MIR -92 170 20 23 33 0 0 chr5 48374879 48374909 -151255241 + AT_rich Low_complexity Low_complexity 1 30 0 330 26 0 0 chr5 48375955 48375994 -151254156 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 588 202 0 0 chr5 48376022 48376121 -151254029 - AluJb SINE Alu -81 231 133 2006 127 0 0 chr5 48376121 48376420 -151253730 + L1P4 LINE L1 5400 5698 -465 22 80 0 0 chr5 48376487 48376537 -151253613 + AT_rich Low_complexity Low_complexity 1 50 0 761 227 0 48 chr5 48377020 48377227 -151252923 + MER3 DNA MER1_type 7 203 -6 531 346 166 19 chr5 48377397 48377646 -151252504 - L2 LINE L2 -5 3308 3097 1393 214 54 3 chr5 48377646 48377941 -151252209 + AluJb SINE Alu 3 312 0 531 346 166 19 chr5 48377941 48378124 -151252026 - L2 LINE L2 -216 3097 2812 397 312 138 5 chr5 48378199 48378388 -151251762 - L2 LINE L2 -2324 990 777 832 128 15 8 chr5 48379031 48379163 -151250987 + MLT1A1 LTR MaLR 7 139 -226 884 130 0 14 chr5 48379163 48379301 -151250849 - THE1B LTR MaLR 0 364 229 1579 124 30 0 chr5 48379405 48379639 -151250511 - THE1B LTR MaLR -123 241 1 712 241 62 31 chr5 48379639 48379863 -151250287 + MLT1A1 LTR MaLR 135 365 0 230 318 0 0 chr5 48381072 48381138 -151249012 + MIR3 SINE MIR 116 181 -27 499 278 13 13 chr5 48381513 48381664 -151248486 + MIR SINE MIR 80 230 -32 204 191 43 21 chr5 48382057 48382104 -151248046 - MIR SINE MIR -21 241 194 314 78 0 20 chr5 48382466 48382517 -151247633 + (CA)n Simple_repeat Simple_repeat 2 51 0 6036 110 8 0 chr5 48385291 48386393 -151243757 - L1PA14 LINE L1 -2 6159 5047 183 304 58 29 chr5 48386855 48386924 -151243226 + L2 LINE L2 3201 3271 -1 200 278 0 0 chr5 48386972 48387026 -151243124 - L2 LINE L2 -494 2820 2767 2123 92 10 23 chr5 48387702 48388007 -151242143 + AluSc SINE Alu 1 301 -8 2045 146 122 10 chr5 48388171 48388556 -151241594 - MSTA LTR MaLR 0 428 1 759 176 0 15 chr5 48389115 48389251 -151240899 + MER20 DNA MER1_type 85 218 -1 573 258 72 30 chr5 48389910 48390174 -151239976 + L1MC5 LINE L1 7611 7885 -76 505 243 79 28 chr5 48390772 48390949 -151239201 - MER58C DNA MER1_type -1 214 29 290 257 239 0 chr5 48393360 48393469 -151236681 + MER5A DNA MER1_type 55 189 0 1780 136 4 4 chr5 48394527 48394792 -151235358 - AluSx SINE Alu -9 303 39 195 341 56 50 chr5 48395016 48395195 -151234955 + L3 LINE CR1 1164 1343 -234 213 215 152 63 chr5 48398077 48398156 -151231994 - L2 LINE L2 0 3272 3187 408 20 0 0 chr5 48398385 48398434 -151231716 + (TG)n Simple_repeat Simple_repeat 2 50 0 29 47 0 0 chr5 48398994 48399037 -151231113 + AT_rich Low_complexity Low_complexity 1 43 0 293 306 56 66 chr5 48399476 48399672 -151230478 + MLT1L LTR MaLR 201 394 -221 231 180 16 16 chr5 48400397 48400458 -151229692 + A-rich Low_complexity Low_complexity 3 63 0 1104 214 51 20 chr5 48400475 48400769 -151229381 - L1MB8 LINE L1 -7 6171 5869 203 241 0 0 chr5 48400988 48401042 -151229108 + (CA)n Simple_repeat Simple_repeat 2 55 0 195 344 62 0 chr5 48401112 48401176 -151228974 + L2 LINE L2 3018 3085 -187 2485 71 0 7 chr5 48402619 48402929 -151227221 - AluSc SINE Alu -1 308 1 2155 130 0 0 chr5 48403412 48403712 -151226438 + AluSx SINE Alu 5 304 -8 21 0 0 0 chr5 48404195 48404216 -151225934 + AT_rich Low_complexity Low_complexity 1 21 0 205 270 54 54 chr5 48404366 48404477 -151225673 + L2 LINE L2 2950 3060 -212 2201 112 0 3 chr5 48405212 48405508 -151224642 - AluSg SINE Alu -15 295 1 328 326 22 92 chr5 48406288 48406324 -151223826 - MER5B DNA MER1_type -7 171 134 2270 78 0 17 chr5 48406324 48406660 -151223490 + AluY SINE Alu 1 311 0 328 326 22 92 chr5 48406660 48406807 -151223343 - MER5B DNA MER1_type -44 134 1 267 281 230 15 chr5 48406841 48406976 -151223174 - MER5A DNA MER1_type 0 189 26 277 342 51 61 chr5 48407024 48407220 -151222930 + MIR SINE MIR 59 252 -10 227 242 0 0 chr5 48408012 48408074 -151222076 + (CAG)n Simple_repeat Simple_repeat 3 64 0 21 57 0 0 chr5 48408638 48408673 -151221477 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr5 48409669 48409711 -151220439 + AT_rich Low_complexity Low_complexity 1 42 0 26 0 0 0 chr5 48410661 48410687 -151219463 + AT_rich Low_complexity Low_complexity 1 26 0 27 29 0 0 chr5 48411116 48411150 -151219000 + AT_rich Low_complexity Low_complexity 1 34 0 757 176 0 0 chr5 48413542 48413673 -151216477 + FLAM_C SINE Alu 1 131 -12 944 179 0 19 chr5 48413732 48413894 -151216256 + AluJb SINE Alu 146 304 -8 2102 122 0 7 chr5 48414025 48414328 -151215822 - AluSx SINE Alu -11 301 1 328 269 0 43 chr5 48414884 48414977 -151215173 + MER5A DNA MER1_type 12 100 -89 1797 132 66 120 chr5 48415608 48416180 -151213970 - LTR12 LTR ERV1 -219 2219 53 270 211 0 0 chr5 48416180 48416232 -151213918 - LTR30 LTR ERV1 -670 52 1 375 302 0 17 chr5 48416247 48416363 -151213787 + MIR SINE MIR 129 242 -20 213 132 0 0 chr5 48416979 48417017 -151213133 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 56 0 0 chr5 48418376 48418412 -151211738 + AT_rich Low_complexity Low_complexity 1 36 0 190 348 29 0 chr5 48418437 48418506 -151211644 + MIR3 SINE MIR 123 193 -15 196 286 143 0 chr5 48418567 48418644 -151211506 + L2 LINE L2 3175 3262 -10 232 49 73 0 chr5 48419563 48419604 -151210546 + T-rich Low_complexity Low_complexity 3 46 0 2224 76 11 0 chr5 48419869 48420194 -151209956 - AluY SINE Alu 0 328 1 339 179 0 0 chr5 48420235 48420291 -151209859 + L2 LINE L2 3217 3272 0 2232 123 6 14 chr5 48420386 48420751 -151209399 + L1MA2 LINE L1 5943 6304 0 1394 195 21 7 chr5 48421131 48421413 -151208737 - AluSx SINE Alu -16 286 1 325 258 8 8 chr5 48421812 48421944 -151208206 + (TA)n Simple_repeat Simple_repeat 2 133 0 219 367 70 55 chr5 48422192 48422391 -151207759 - L2 LINE L2 -342 2972 2771 5785 262 39 31 chr5 48422395 48424870 -151205280 + L1PA15 LINE L1 1 2854 -3943 1976 137 7 0 chr5 48424870 48425147 -151205003 + AluSg SINE Alu 1 279 -31 5785 262 39 31 chr5 48425147 48426411 -151203739 + L1PA15 LINE L1 2854 4106 -2691 42792 50 3 3 chr5 48426413 48432610 -151197540 + L1PA4 LINE L1 1 6199 0 8176 196 17 18 chr5 48432611 48433097 -151197053 + L1PA15 LINE L1 4097 4582 -2234 2205 99 3 0 chr5 48433097 48433390 -151196760 + AluSg SINE Alu 1 294 -16 8176 196 17 18 chr5 48433390 48434020 -151196130 + L1PA15 LINE L1 4582 5211 -1605 2068 123 7 0 chr5 48434020 48434313 -151195837 + AluSp SINE Alu 1 295 -18 8176 196 17 18 chr5 48434313 48435919 -151194231 + L1PA15 LINE L1 5211 6813 -3 2663 88 3 0 chr5 48436039 48436393 -151193757 + THE1A LTR MaLR 1 355 0 10879 105 15 14 chr5 48436394 48437971 -151192179 + THE1A-int LTR MaLR 2 1580 0 2468 100 12 0 chr5 48437971 48438311 -151191839 + THE1A LTR MaLR 1 344 -11 453 262 0 0 chr5 48438318 48438425 -151191725 + MER94 DNA DNA 8 114 -20 772 248 8 65 chr5 48439643 48439889 -151190261 + MIR SINE MIR 2 233 -29 375 322 90 6 chr5 48439916 48440093 -151190057 + L2 LINE L2 2219 2410 -904 1886 191 19 8 chr5 48440113 48440474 -151189676 - MLT1A1 LTR MaLR 0 365 1 646 271 113 17 chr5 48644623 48644914 -150985236 - L2 LINE L2 -542 2772 2454 574 185 75 48 chr5 48645019 48645110 -150985040 + MLT1B LTR MaLR 1 99 -291 2118 126 83 6 chr5 48645110 48645458 -150984692 - THE1C LTR MaLR 0 375 1 574 185 75 48 chr5 48645458 48645512 -150984638 + MLT1B LTR MaLR 99 150 -240 262 141 141 65 chr5 48645590 48645682 -150984468 + MLT1B LTR MaLR 274 372 -2 575 27 14 0 chr5 48646486 48646559 -150983591 + (CA)n Simple_repeat Simple_repeat 2 75 0 195 204 0 0 chr5 48650927 48650971 -150979179 + (TG)n Simple_repeat Simple_repeat 1 44 0 357 43 0 0 chr5 48651043 48651090 -150979060 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 872 19 9 0 chr5 48651983 48652089 -150978061 + (TTTCC)n Simple_repeat Simple_repeat 5 111 0 464 250 12 70 chr5 48652296 48652468 -150977682 - MLT1F LTR MaLR 0 542 381 277 242 30 30 chr5 48652479 48652545 -150977605 + tRNA-Ala-GCG tRNA tRNA 3 68 -7 234 252 2 2 chr5 48653470 48653546 -150976604 - L1 LINE L1 -1626 4520 4445 225 211 26 26 chr5 48655969 48656045 -150974105 + A-rich Low_complexity Low_complexity 3 78 0 2154 233 16 2 chr5 48657420 48657978 -150972172 + L1 LINE L1 3885 4450 -1696 328 264 38 75 chr5 48659653 48659759 -150970391 + MLT1E1 LTR MaLR 3 104 -550 316 243 56 37 chr5 48660183 48660290 -150969860 + MLT1E1 LTR MaLR 382 490 -164 199 222 14 14 chr5 48660490 48660562 -150969588 + CT-rich Low_complexity Low_complexity 4 75 0 869 290 104 21 chr5 48661016 48661459 -150968691 - MLT1E LTR MaLR -72 521 39 188 255 0 0 chr5 48663683 48663734 -150966416 - MIR SINE MIR -102 106 56 189 121 0 0 chr5 48666909 48666942 -150963208 + (A)n Simple_repeat Simple_repeat 1 33 0 231 285 104 35 chr5 48667098 48667242 -150962908 - MER3 DNA MER1_type -55 154 1 407 266 111 29 chr5 48668440 48668647 -150961503 - MIR SINE MIR -2 260 37 263 320 47 0 chr5 48668701 48668829 -150961321 - MIR SINE MIR -70 192 59 398 125 167 10 chr5 48669276 48669372 -150960778 + L1 LINE L1 3584 3694 -2452 24 32 0 0 chr5 48672351 48672382 -150957768 + AT_rich Low_complexity Low_complexity 1 31 0 2637 106 5 11 chr5 48675593 48675970 -150954180 - THE1C LTR MaLR 0 375 1 277 346 85 8 chr5 48676441 48676571 -150953579 + MIR3 SINE MIR 58 197 -11 455 283 60 76 chr5 48677119 48677434 -150952716 + MER46C DNA MER2_type 8 317 -21 2423 88 0 0 chr5 48677960 48678267 -150951883 - AluY SINE Alu -4 307 1 1940 101 74 20 chr5 48678369 48678665 -150951485 + AluSx SINE Alu 1 312 0 19867 56 2 2 chr5 48679644 48682164 -150947986 - L1P LINE L1 -2285 3861 1340 1445 184 58 19 chr5 48682171 48682481 -150947669 - L1P LINE L1 -5740 406 85 8470 49 3 1 chr5 48682583 48684416 -150945734 + L1PA5 LINE L1 4321 6154 0 7698 35 0 0 chr5 48684832 48686183 -150943967 + L1PA3 LINE L1 4862 6212 0 1900 110 51 20 chr5 48686263 48686555 -150943595 + AluSc SINE Alu 3 303 -6 24 0 0 0 chr5 48686971 48686995 -150943155 + AT_rich Low_complexity Low_complexity 1 24 0 4042 35 8 12 chr5 48687015 48687508 -150942642 - L1PA4 LINE L1 -3 6152 5662 1205 345 76 18 chr5 48687514 48688643 -150941507 - L2 LINE L2 -1156 2158 964 204 275 55 46 chr5 48688708 48688817 -150941333 + MIR3 SINE MIR 86 195 -13 3174 163 30 0 chr5 48688926 48689465 -150940685 - Tigger1 DNA MER2_type -1863 555 1 217 346 40 0 chr5 48689833 48689934 -150940216 + MIR3 SINE MIR 63 167 -41 760 223 69 6 chr5 48690028 48690203 -150939947 + MER5A DNA MER1_type 1 186 -3 248 232 18 0 chr5 48690496 48690552 -150939598 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 255 324 29 41 chr5 48691605 48691784 -150938366 - MIR SINE MIR -63 145 16 250 78 0 78 chr5 48691854 48691905 -150938245 - Alu SINE Alu 0 301 255 14028 37 7 4 chr5 48692007 48694850 -150935300 - L1PA4 LINE L1 -305 5850 2999 674 185 25 49 chr5 48695441 48695603 -150934547 - L1PB4 LINE L1 -1 6155 5998 2813 268 67 51 chr5 48695753 48697479 -150932671 - L1PA15-16 LINE L1 -4469 2380 743 317 271 75 0 chr5 48698175 48698282 -150931868 - MIR SINE MIR 0 262 148 442 227 116 12 chr5 48698300 48698472 -150931678 - L1MB3 LINE L1 -7 6176 5987 199 277 31 31 chr5 48698481 48698546 -150931604 - MIR SINE MIR -67 141 77 419 38 0 0 chr5 48700877 48700930 -150929220 + MADE1 DNA Mariner 1 53 -27 1651 184 67 12 chr5 48701195 48701597 -150928553 - L1 LINE L1 -1312 4834 4411 2503 56 15 0 chr5 48701697 48702036 -150928114 + L1PA4 LINE L1 5812 6155 0 26 0 0 0 chr5 48702808 48702834 -150927316 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 48702871 48702892 -150927258 + AT_rich Low_complexity Low_complexity 1 21 0 702 192 187 5 chr5 48704735 48704933 -150925217 - MER31B LTR ERV1 -8 458 225 543 232 48 77 chr5 48704969 48705176 -150924974 - L1ME2 LINE L1 -3 6161 5961 4754 147 13 12 chr5 48705177 48706192 -150923958 - L1MA8 LINE L1 -229 6062 5045 1127 127 6 0 chr5 48706192 48706357 -150923793 - MER4A LTR ERV1 0 664 499 187 313 62 0 chr5 48707030 48707110 -150923040 + MIR SINE MIR 151 235 -27 2310 84 0 31 chr5 48707305 48707625 -150922525 - AluY SINE Alu -1 310 1 239 299 81 0 chr5 48708590 48708677 -150921473 + L2 LINE L2 2943 3036 -277 314 198 77 44 chr5 48708715 48708806 -150921344 + L2 LINE L2 3155 3248 -65 399 328 75 0 chr5 48709670 48709856 -150920294 - MIR SINE MIR -2 260 61 2916 224 34 31 chr5 48709856 48710285 -150919865 + L1MA7 LINE L1 3826 4259 -1887 210 37 0 0 chr5 48710285 48710312 -150919838 + (CATG)n Simple_repeat Simple_repeat 4 30 0 2916 224 34 31 chr5 48710312 48710711 -150919439 + L1MA7 LINE L1 4259 4656 -1490 295 183 28 28 chr5 48710715 48710786 -150919364 + L1PA15-16 LINE L1 276 346 -6503 4701 152 26 23 chr5 48710795 48711652 -150918498 - L1PA16 LINE L1 0 6166 5308 992 236 25 63 chr5 48711634 48711918 -150918232 + L1PA15-16 LINE L1 415 687 -6162 * 2376 161 60 60 chr5 48712279 48712895 -150917255 - L1MA7 LINE L1 -1312 4834 4219 4380 170 59 30 chr5 48712901 48714122 -150916028 + L1MA7 LINE L1 4848 6117 -174 2354 53 0 27 chr5 48714122 48714422 -150915728 + AluY SINE Alu 1 292 -19 4380 170 59 30 chr5 48714422 48714601 -150915549 + L1MA7 LINE L1 6117 6289 -2 380 292 44 0 chr5 48714631 48714744 -150915406 - MIR SINE MIR -108 154 37 233 294 185 0 chr5 48714960 48715052 -150915098 + MIR SINE MIR 36 144 -64 1776 174 37 42 chr5 48715896 48716326 -150913824 - MSTA LTR MaLR 0 428 1 35 0 0 0 chr5 48716503 48716538 -150913612 + AT_rich Low_complexity Low_complexity 1 35 0 1014 148 92 0 chr5 48716644 48716840 -150913310 - L1PA13 LINE L1 -2 6161 5948 5806 158 43 29 chr5 48716840 48718736 -150911414 - L1PA13 LINE L1 -25 6138 4219 1988 143 3 0 chr5 48718736 48719022 -150911128 + AluSx SINE Alu 3 289 -23 5806 158 43 29 chr5 48719022 48719096 -150911054 - L1PA13 LINE L1 -1944 4219 4148 3385 164 13 11 chr5 48719120 48720200 -150909950 - L1PA13 LINE L1 -411 5754 4675 1183 197 37 21 chr5 48720304 48720629 -150909521 - L1 LINE L1 -772 5374 5045 1272 113 11 0 chr5 48720629 48720814 -150909336 - MER4B LTR ERV1 0 610 424 263 95 0 0 chr5 48720818 48720860 -150909290 - MADE1 DNA Mariner -4 76 35 273 111 22 0 chr5 48720947 48720992 -150909158 - MADE1 DNA Mariner -34 46 1 2200 120 99 18 chr5 48720992 48721385 -150908765 - MER4B LTR ERV1 -185 425 1 1863 165 36 43 chr5 48721386 48721779 -150908371 - L1 LINE L1 -1099 5047 4658 549 288 62 10 chr5 48721818 48722043 -150908107 - MLT1H LTR MaLR -3 546 278 4101 124 8 11 chr5 48722051 48722255 -150907895 - MER41B LTR ERV1 -8 627 424 2198 133 30 25 chr5 48722255 48722617 -150907533 - THE1B LTR MaLR 0 364 1 4101 124 8 11 chr5 48722617 48723041 -150907109 - MER41B LTR ERV1 -211 424 1 543 313 108 8 chr5 48723041 48723286 -150906864 - MLT1H LTR MaLR -267 282 11 338 222 0 50 chr5 48723287 48723386 -150906764 - L1ME2 LINE L1 -234 5930 5837 1461 222 47 52 chr5 48723388 48723524 -150906626 - MLT1C LTR MaLR -43 424 289 4241 139 34 21 chr5 48723524 48724280 -150905870 + MER4E LTR ERV1 1 766 0 1461 222 47 52 chr5 48724280 48724567 -150905583 - MLT1C LTR MaLR -178 289 3 1267 221 47 36 chr5 48724571 48724796 -150905354 - L1ME2 LINE L1 -441 5723 5491 2079 109 10 7 chr5 48724796 48725100 -150905050 + AluSq SINE Alu 1 305 -8 1267 221 47 36 chr5 48725100 48725258 -150904892 - L1ME2 LINE L1 -673 5491 5336 2019 187 38 115 chr5 48725355 48725885 -150904265 - MLT1D LTR MaLR -16 489 1 789 233 147 20 chr5 48725887 48726132 -150904018 + LTR50 LTR ERVL 3 278 -517 360 239 188 24 chr5 48726253 48726466 -150903684 + LTR50 LTR ERVL 528 775 -20 315 0 0 0 chr5 48726910 48726945 -150903205 + (CA)n Simple_repeat Simple_repeat 1 35 0 35 54 0 0 chr5 48728781 48728837 -150901313 + AT_rich Low_complexity Low_complexity 1 56 0 1875 152 17 0 chr5 48729998 48730287 -150899863 - AluSx SINE Alu -16 296 3 901 87 0 0 chr5 48731729 48731844 -150898306 + AluSq/x SINE Alu 1 115 -198 502 231 88 28 chr5 48732071 48732253 -150897897 + L1MC5 LINE L1 7721 7913 -48 22 56 5 0 chr5 48732484 48732568 -150897582 + AT_rich Low_complexity Low_complexity 1 50 0 2192 229 43 24 chr5 48733621 48734175 -150895975 + MER90 LTR ERV1 1 565 -10 2855 157 14 0 chr5 48734267 48734759 -150895391 - L1MB3 LINE L1 0 6183 5685 220 221 211 29 chr5 48735210 48735314 -150894836 + L2 LINE L2 3191 3313 0 208 279 82 74 chr5 48735331 48735453 -150894697 - L2 LINE L2 -25 3288 3166 24 32 0 0 chr5 48736053 48736084 -150894066 + AT_rich Low_complexity Low_complexity 1 31 0 2121 70 0 4 chr5 48736683 48736942 -150893208 + AluY SINE Alu 1 258 -53 286 338 26 52 chr5 48737024 48737098 -150893052 - MIR3 SINE MIR -5 203 129 2690 173 2 11 chr5 48737098 48737566 -150892584 + MLT2C2 LTR ERVL 1 464 0 286 338 26 52 chr5 48737566 48737645 -150892505 - MIR3 SINE MIR -79 129 54 272 276 89 47 chr5 48738094 48738253 -150891897 - MIR SINE MIR -59 203 35 349 278 8 53 chr5 48741482 48741615 -150888535 - MIR SINE MIR -41 221 95 412 269 119 25 chr5 48743903 48744063 -150886087 + MER5A DNA MER1_type 9 183 -6 249 83 0 0 chr5 48744828 48744864 -150885286 + (CA)n Simple_repeat Simple_repeat 1 36 0 318 87 0 0 chr5 48746060 48746106 -150884044 + (CA)n Simple_repeat Simple_repeat 1 46 0 976 344 33 9 chr5 48747162 48747583 -150882567 + L2 LINE L2 971 1401 -1913 197 108 27 0 chr5 48747663 48747700 -150882450 + (CA)n Simple_repeat Simple_repeat 1 38 0 1237 301 96 18 chr5 48747720 48748348 -150881802 + L2 LINE L2 1354 2030 -1284 2374 138 16 23 chr5 48748354 48748790 -150881360 - L1MB1 LINE L1 0 6168 5736 659 306 59 24 chr5 48748905 48749193 -150880957 + LTR16A1 LTR ERVL 160 457 0 246 316 143 0 chr5 48750013 48750111 -150880039 - L2 LINE L2 -15 3298 3187 257 336 25 34 chr5 48750549 48750668 -150879482 - MER5A DNA MER1_type -25 164 47 1057 173 15 5 chr5 48750683 48750885 -150879265 + MER3 DNA MER1_type 1 204 -5 196 265 44 15 chr5 48751131 48751199 -150878951 + L2 LINE L2 3202 3271 -1 414 222 63 167 chr5 48751440 48751511 -150878639 + MIR SINE MIR 40 117 -145 2082 131 3 13 chr5 48751511 48751824 -150878326 - AluSq SINE Alu -3 310 1 414 222 63 167 chr5 48751824 48751841 -150878309 + MIR SINE MIR 117 134 -128 2400 96 0 0 chr5 48751841 48752144 -150878006 - AluSx SINE Alu -9 303 1 414 222 63 167 chr5 48752144 48752275 -150877875 + MIR SINE MIR 134 237 -25 252 195 0 65 chr5 48753068 48753145 -150877005 + LTR67 LTR ERVL 458 529 -28 789 251 45 45 chr5 48753403 48753464 -150876686 - MER58A DNA MER1_type -2197 223 163 1772 176 31 8 chr5 48753464 48753817 -150876333 + MLT1A1 LTR MaLR 5 365 0 789 251 45 45 chr5 48753817 48753978 -150876172 - MER58A DNA MER1_type -2256 164 1 245 305 0 0 chr5 48753979 48754038 -150876112 + L2 LINE L2 3255 3313 0 495 298 89 21 chr5 48754260 48754286 -150875864 - MIR SINE MIR -6 256 233 356 302 36 52 chr5 48754286 48754478 -150875672 + MER5A DNA MER1_type 1 189 0 495 298 89 21 chr5 48754478 48754686 -150875464 - MIR SINE MIR -29 233 6 209 366 61 0 chr5 48756957 48757039 -150873111 + L2 LINE L2 3199 3285 -28 1438 213 0 20 chr5 48757161 48757461 -150872689 + MLT1A1 LTR MaLR 72 365 0 1350 248 60 42 chr5 48759052 48759504 -150870646 + MLT1C LTR MaLR 5 464 -3 189 0 0 0 chr5 48760584 48760605 -150869545 + (CATCT)n Simple_repeat Simple_repeat 3 23 0 338 105 0 18 chr5 48760939 48760996 -150869154 + (TTCC)n Simple_repeat Simple_repeat 1 56 0 1843 166 0 0 chr5 48761001 48761279 -150868871 - AluSx SINE Alu -34 278 1 1217 141 40 83 chr5 48763491 48763768 -150866382 + MLT2C2 LTR ERVL 1 265 -199 22205 62 3 5 chr5 48763824 48766688 -150863462 + L1P LINE L1 1 2859 -3287 8884 148 27 15 chr5 48766892 48767817 -150862333 + Tigger1 DNA MER2_type 865 1817 -601 2334 78 0 10 chr5 48767817 48768111 -150862039 - AluY SINE Alu -20 291 1 8884 148 27 15 chr5 48768111 48768721 -150861429 + Tigger1 DNA MER2_type 1817 2418 0 366 222 0 0 chr5 48768961 48769033 -150861117 + L2 LINE L2 3201 3272 0 22 0 0 0 chr5 48769293 48769315 -150860835 + AT_rich Low_complexity Low_complexity 1 22 0 2297 171 6 49 chr5 48769321 48769789 -150860361 - L1MB2 LINE L1 -36 6135 5688 1805 123 31 27 chr5 48769790 48770083 -150860067 + MER7A DNA MER2_type 55 346 0 3763 194 31 12 chr5 48770086 48771344 -150858806 - L1MB2 LINE L1 -491 5680 4389 23 0 0 0 chr5 48771643 48771666 -150858484 + AT_rich Low_complexity Low_complexity 1 23 0 425 262 63 16 chr5 48773729 48773855 -150856295 - L2 LINE L2 0 3313 3182 290 294 98 101 chr5 48774828 48775045 -150855105 + MIR SINE MIR 4 212 -50 359 336 34 17 chr5 48775351 48775470 -150854680 + L2 LINE L2 3150 3270 -2 257 152 22 0 chr5 48775673 48775719 -150854431 - MER63 DNA MER1_type -36 1026 980 476 209 22 0 chr5 48775723 48775814 -150854336 - MER63 DNA MER1_type -311 751 33 435 308 146 39 chr5 48776937 48777301 -150852849 - L1MB2 LINE L1 -2868 3278 2876 750 230 16 95 chr5 48777361 48777613 -150852537 - MIR SINE MIR 0 262 31 623 205 8 8 chr5 48777997 48778119 -150852031 + MER5B DNA MER1_type 1 122 -56 26 0 0 0 chr5 48778208 48778234 -150851916 + AT_rich Low_complexity Low_complexity 1 26 0 1316 146 67 4 chr5 48778355 48778595 -150851555 + MER2 DNA MER2_type 91 345 0 1723 318 98 60 chr5 48778785 48780531 -150849619 - L2 LINE L2 -251 3021 1217 676 268 87 79 chr5 48780559 48781176 -150848974 - L2 LINE L2 0 3313 2717 253 302 212 50 chr5 48781188 48781566 -150848584 - L2 LINE L2 -2118 1196 758 22 56 0 0 chr5 48781591 48781627 -150848523 + AT_rich Low_complexity Low_complexity 1 36 0 190 364 33 66 chr5 48781964 48782115 -150848035 + MER5A DNA MER1_type 44 189 0 603 326 94 40 chr5 48782128 48782659 -150847491 + MLT1K LTR MaLR 3 562 -26 542 179 9 0 chr5 48785119 48785225 -150844925 + FRAM SINE Alu 70 176 0 717 253 261 9 chr5 48785453 48785984 -150844166 + LTR50 LTR ERVL 3 785 -10 1555 221 66 18 chr5 48786208 48786647 -150843503 + MLT1C LTR MaLR 8 467 0 471 304 61 17 chr5 48787838 48788019 -150842131 + MIR SINE MIR 49 237 -25 1151 274 25 38 chr5 48788986 48789384 -150840766 - L2 LINE L2 -831 2483 2091 492 378 101 16 chr5 48789413 48789926 -150840224 - L3 LINE CR1 -353 1224 668 29 0 0 0 chr5 48789948 48789977 -150840173 + AT_rich Low_complexity Low_complexity 1 29 0 1923 141 10 10 chr5 48789977 48790276 -150839874 - AluSx SINE Alu -13 299 1 34 24 0 0 chr5 48790413 48790454 -150839696 + AT_rich Low_complexity Low_complexity 1 41 0 22 35 0 0 chr5 48790706 48790735 -150839415 + AT_rich Low_complexity Low_complexity 1 29 0 3456 27 0 2 chr5 48791192 48791602 -150838548 - L1PA4 LINE L1 -3 6152 5744 397 380 46 37 chr5 48791870 48792301 -150837849 + L1MEd LINE L1 356 790 -5415 594 247 91 62 chr5 48792302 48792787 -150837363 + L1MEd LINE L1 842 1340 -4865 2099 169 9 23 chr5 48792952 48793433 -150836717 + L1P3 LINE L1 6 788 -5673 227 132 0 26 chr5 48793627 48793665 -150836485 - MLT2D LTR ERVL 0 554 518 369 0 0 0 chr5 48793665 48793706 -150836444 + (TG)n Simple_repeat Simple_repeat 2 42 0 2258 213 65 19 chr5 48793706 48793743 -150836407 - MLT2B3 LTR ERVL -3 551 517 474 14 57 0 chr5 48793743 48793813 -150836337 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 2258 213 65 19 chr5 48793813 48794093 -150836057 - MLT2B3 LTR ERVL -37 517 197 1781 165 7 0 chr5 48794093 48794427 -150835723 - AluSx SINE Alu 0 336 1 2258 213 65 19 chr5 48794427 48794633 -150835517 - MLT2B3 LTR ERVL -357 197 2 309 107 67 0 chr5 48794633 48794708 -150835442 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 1198 192 52 119 chr5 48794708 48795135 -150835015 - MLT2D LTR ERVL -15 399 2 452 287 31 36 chr5 48795587 48795782 -150834368 + L1MEd LINE L1 2103 2296 -4100 340 221 11 11 chr5 48795865 48795960 -150834190 + HAL1 LINE L1 2258 2352 -155 5883 7 0 7 chr5 48795971 48796646 -150833504 + L1HS LINE L1 5486 6155 0 726 233 93 5 chr5 48797499 48797692 -150832458 - MER63A DNA MER1_type 0 210 1 597 271 61 32 chr5 48797802 48798340 -150831810 + L1MCc LINE L1 1121 1847 -4891 1583 221 47 0 chr5 48798399 48798721 -150831429 + MER2 DNA MER2_type 9 345 0 212 173 39 0 chr5 48798722 48798774 -150831376 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2459 53 20 0 chr5 48798820 48799119 -150831031 + AluY SINE Alu 1 305 -6 201 147 0 0 chr5 48799122 48799156 -150830994 + (TA)n Simple_repeat Simple_repeat 1 34 0 306 218 35 113 chr5 48799199 48799341 -150830809 + L1MCc LINE L1 2105 2235 -4887 748 248 124 11 chr5 48799446 48799817 -150830333 + L1MCc LINE L1 2564 2976 -4146 2662 13 10 0 chr5 48800528 48800836 -150829314 + AluYb8 SINE Alu 1 311 -7 464 340 63 15 chr5 48801677 48802000 -150828150 + HERVL LTR ERVL 1776 2120 -3033 309 68 0 0 chr5 48802209 48802253 -150827897 + (TA)n Simple_repeat Simple_repeat 2 45 0 180 0 0 0 chr5 48802259 48802279 -150827871 + (CA)n Simple_repeat Simple_repeat 2 21 0 1888 193 135 9 chr5 48802297 48802749 -150827401 + LTR22 LTR ERVK 1 509 0 1228 235 58 36 chr5 48802749 48803161 -150826989 - L1MA9 LINE L1 -96 6216 5796 5237 135 16 16 chr5 48803518 48804421 -150825729 + L1PA10 LINE L1 5262 6164 -4 464 262 90 0 chr5 48805150 48805295 -150824855 - MIR SINE MIR -34 228 71 540 56 0 0 chr5 48806265 48806336 -150823814 + L1PA6 LINE L1 6078 6148 -6 24 32 0 0 chr5 48806336 48806367 -150823783 + AT_rich Low_complexity Low_complexity 1 31 0 207 155 56 14 chr5 48806518 48806589 -150823561 + (TA)n Simple_repeat Simple_repeat 2 75 0 35 0 0 0 chr5 48808148 48808183 -150821967 + AT_rich Low_complexity Low_complexity 1 35 0 502 296 82 61 chr5 48808312 48808829 -150821321 + L1MEc LINE L1 862 1407 -4989 198 71 0 0 chr5 48808829 48808857 -150821293 + (CA)n Simple_repeat Simple_repeat 1 28 0 502 296 82 61 chr5 48808857 48809228 -150820922 + L1MEc LINE L1 1407 1769 -4627 1231 283 49 47 chr5 48809251 48810340 -150819810 + L1MEc LINE L1 1849 2894 -3321 309 109 0 0 chr5 48810772 48810818 -150819332 + (TG)n Simple_repeat Simple_repeat 1 46 0 411 222 28 23 chr5 48811345 48811521 -150818629 + (TA)n Simple_repeat Simple_repeat 2 178 0 252 319 18 18 chr5 48811808 48811971 -150818179 + CT-rich Low_complexity Low_complexity 1 163 0 207 228 24 31 chr5 48811985 48812112 -150818038 + CT-rich Low_complexity Low_complexity 1 126 0 21 0 0 0 chr5 48812421 48812442 -150817708 + AT_rich Low_complexity Low_complexity 1 21 0 1430 174 52 11 chr5 48812718 48813098 -150817052 + AluJb SINE Alu 1 391 0 746 259 25 15 chr5 48813446 48813647 -150816503 + MER58A DNA MER1_type 7 209 -15 998 345 138 8 chr5 48813846 48814505 -150815645 + L2 LINE L2 2177 2921 -393 722 265 89 22 chr5 48814634 48815004 -150815146 - LTR37B LTR ERV1 -73 395 1 429 327 27 0 chr5 48815012 48815162 -150814988 - MIR SINE MIR -106 156 3 390 365 50 21 chr5 48815559 48815841 -150814309 - L1ME4a LINE L1 -213 5908 5619 4704 139 31 1 chr5 48816468 48817251 -150812899 - L1PA16 LINE L1 -16 6150 5345 1798 112 11 14 chr5 48817287 48817565 -150812585 - L1PA8A LINE L1 -3 6128 5852 404 58 0 0 chr5 48817587 48817639 -150812511 - MLT2A1 LTR ERVL 0 444 393 292 134 0 30 chr5 48817679 48817746 -150812404 + (TG)n Simple_repeat Simple_repeat 1 65 0 241 152 0 0 chr5 48817903 48817949 -150812201 + LTR66 LTR ERVL 394 439 -171 * 2661 95 22 5 chr5 48817945 48818312 -150811838 - MLT2A1 LTR ERVL -71 373 1 3313 253 35 2 chr5 48818312 48819347 -150810803 - L1PA16 LINE L1 -810 5336 4268 413 262 30 82 chr5 48819464 48819650 -150810500 + MLT1H1 LTR MaLR 373 555 0 237 33 0 0 chr5 48821469 48821499 -150808651 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr5 48821692 48821713 -150808437 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr5 48822093 48822125 -150808025 + AT_rich Low_complexity Low_complexity 1 32 0 1156 144 18 52 chr5 48822422 48822651 -150807499 + Tigger2a DNA MER2_type 2 222 -212 356 167 26 13 chr5 48823228 48823306 -150806844 - MER67C LTR ERV1 -37 673 595 1540 168 3 99 chr5 48823328 48823710 -150806440 + MER7A DNA MER2_type 4 346 0 1736 199 17 11 chr5 48823902 48824264 -150805886 + MLT1A1 LTR MaLR 2 365 0 9944 206 26 17 chr5 48825121 48825209 -150804941 - L1PA16 LINE L1 -2889 3257 3171 183 80 0 0 chr5 48825209 48825234 -150804916 + (TG)n Simple_repeat Simple_repeat 2 26 0 9944 206 26 17 chr5 48825234 48827438 -150802712 - L1PA16 LINE L1 -2975 3171 944 194 308 137 8 chr5 48827547 48827664 -150802486 + MIR SINE MIR 131 262 0 237 65 0 0 chr5 48828183 48828214 -150801936 + (TG)n Simple_repeat Simple_repeat 2 32 0 247 305 0 42 chr5 48828367 48828485 -150801665 + MIR SINE MIR 98 210 -52 23 0 0 0 chr5 48828540 48828563 -150801587 + AT_rich Low_complexity Low_complexity 1 23 0 4816 224 6 29 chr5 48830615 48831866 -150798284 - L1 LINE L1 -1359 4787 3566 775 226 10 25 chr5 48831879 48832083 -150798067 + L1P LINE L1 3354 3554 -2592 225 0 0 0 chr5 48832117 48832142 -150798008 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 1299 215 32 54 chr5 48832422 48832794 -150797356 + MLT1A1 LTR MaLR 2 365 0 1784 185 48 42 chr5 48833576 48834136 -150796014 + MLT2A2 LTR ERVL 1 554 0 32 43 0 0 chr5 48834193 48834239 -150795911 + AT_rich Low_complexity Low_complexity 1 46 0 251 274 27 0 chr5 48834542 48834615 -150795535 + L1MC4a LINE L1 6642 6716 -1092 742 276 49 28 chr5 48834641 48834927 -150795223 + L1MC4 LINE L1 6780 7071 -971 305 273 88 49 chr5 48834945 48835427 -150794723 + L1MC5 LINE L1 7130 7470 -492 3563 158 24 38 chr5 48835698 48836098 -150794052 + Tigger3b DNA MER2_type 3 392 -2636 2195 63 3 21 chr5 48836098 48836412 -150793738 - AluY SINE Alu 0 309 1 3563 158 24 38 chr5 48836412 48836717 -150793433 + Tigger3b DNA MER2_type 392 700 -531 456 118 26 0 chr5 48836721 48836797 -150793353 + AluS SINE Alu 1 78 -234 233 260 0 0 chr5 48836901 48836951 -150793199 + GA-rich Low_complexity Low_complexity 1 50 0 933 169 18 0 chr5 48838750 48838916 -150791234 - MLT1A1 LTR MaLR 0 365 197 2006 229 26 9 chr5 48838921 48839340 -150790810 - MLT2B3 LTR ERVL -128 426 1 262 253 35 46 chr5 48839651 48839738 -150790412 - MER5A DNA MER1_type -2 187 102 957 163 62 0 chr5 48840411 48840589 -150789561 + MSTA LTR MaLR 240 428 0 22 0 0 0 chr5 48840621 48840643 -150789507 + AT_rich Low_complexity Low_complexity 1 22 0 378 0 0 0 chr5 48841223 48841265 -150788885 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 316 319 65 22 chr5 48842019 48842157 -150787993 + MIR SINE MIR 28 171 -91 1427 111 58 0 chr5 48842157 48842400 -150787750 + L1MA6 LINE L1 6038 6294 -6 454 239 181 32 chr5 48842866 48843021 -150787129 - MER5A DNA MER1_type 0 189 12 1524 159 69 39 chr5 48843359 48843723 -150786427 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr5 48843900 48843943 -150786207 + AT_rich Low_complexity Low_complexity 1 43 0 216 0 0 0 chr5 48844641 48844665 -150785485 + (A)n Simple_repeat Simple_repeat 1 24 0 2017 60 4 30 chr5 48844896 48845165 -150784985 - AluY SINE Alu -13 298 37 265 169 39 0 chr5 48845281 48845358 -150784792 + (TATG)n Simple_repeat Simple_repeat 2 81 0 271 229 0 48 chr5 48845388 48845471 -150784679 - L1MC4 LINE L1 -1339 6703 6625 221 282 14 0 chr5 48845475 48845546 -150784604 + (TA)n Simple_repeat Simple_repeat 2 73 0 24 0 0 0 chr5 48845708 48845732 -150784418 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 48845856 48845884 -150784266 + AT_rich Low_complexity Low_complexity 1 28 0 48 43 0 0 chr5 48846068 48846137 -150784013 + AT_rich Low_complexity Low_complexity 1 69 0 4844 190 30 12 chr5 48846282 48847412 -150782738 + L1MA7 LINE L1 5145 6290 -1 15976 84 8 6 chr5 48847665 48848044 -150782106 - HERVL LTR ERVL -292 5362 4985 2457 22 4 0 chr5 48848044 48848319 -150781831 - AluYa5 SINE Alu -9 302 27 15976 84 8 6 chr5 48848319 48850635 -150779515 - HERVL LTR ERVL -669 4985 2609 224 220 9 37 chr5 48851488 48851597 -150778553 + (TTAA)n Simple_repeat Simple_repeat 4 109 0 908 202 6 0 chr5 48852968 48853136 -150777014 + AluJb SINE Alu 136 304 -8 210 240 0 0 chr5 48854093 48854143 -150776007 + A-rich Low_complexity Low_complexity 1 50 0 2132 79 4 4 chr5 48855278 48855558 -150774592 - AluY SINE Alu -2 309 30 2117 125 0 25 chr5 48855624 48855945 -150774205 - AluSq SINE Alu 0 313 1 2586 114 8 0 chr5 48856084 48856460 -150773690 + L1P4 LINE L1 5304 5682 -486 370 239 39 15 chr5 48856476 48856606 -150773544 - LTR37B LTR ERV1 -8 460 328 550 61 102 31 chr5 48856838 48856887 -150773263 - MLT2A1 LTR ERVL 0 444 400 257 75 25 0 chr5 48856887 48856927 -150773223 + (TG)n Simple_repeat Simple_repeat 2 42 0 550 61 102 31 chr5 48856927 48856975 -150773175 - MLT2A1 LTR ERVL -44 400 340 4305 194 27 37 chr5 48856975 48857869 -150772281 - L1MC1 LINE L1 -115 6218 5316 200 33 0 33 chr5 48857869 48857899 -150772251 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1575 171 4 4 chr5 48857903 48858172 -150771978 - AluSx SINE Alu -30 282 14 4305 194 27 37 chr5 48858172 48858247 -150771903 - L1MC1 LINE L1 -1020 5313 5254 21 0 0 0 chr5 48858627 48858648 -150771502 + AT_rich Low_complexity Low_complexity 1 21 0 411 330 63 42 chr5 48858919 48859204 -150770946 + L2 LINE L2 3021 3311 -2 1034 225 0 0 chr5 48859609 48859822 -150770328 + L1PB4 LINE L1 5941 6153 -3 2037 115 4 7 chr5 48860114 48860423 -150769727 + AluSx SINE Alu 5 312 0 323 313 35 55 chr5 48860494 48860695 -150769455 + MIR3 SINE MIR 12 208 0 189 0 0 0 chr5 48861286 48861307 -150768843 + (CA)n Simple_repeat Simple_repeat 2 22 0 3326 84 13 4 chr5 48861447 48861900 -150768250 + LTR22A LTR ERVK 1 457 -1 568 140 21 0 chr5 48861974 48862067 -150768083 + HERVK22 LTR ERVK 91 185 -6652 1677 152 77 37 chr5 48862175 48862498 -150767652 - MER1B DNA MER1_type 0 337 2 2630 52 0 0 chr5 48863009 48863318 -150766832 + AluY SINE Alu 2 310 -1 477 0 0 0 chr5 48864846 48864899 -150765251 + (CA)n Simple_repeat Simple_repeat 2 54 0 433 162 57 57 chr5 48865041 48865146 -150765004 + MLT1D LTR MaLR 401 505 0 1576 204 64 3 chr5 48865203 48865517 -150764633 - MSTB LTR MaLR 0 426 94 1455 124 40 12 chr5 48865553 48865803 -150764347 - L1PA13 LINE L1 -20 6143 5887 432 159 0 0 chr5 48865800 48865869 -150764281 + L1P LINE L1 4926 4994 -1152 * 382 111 0 0 chr5 48865869 48865923 -150764227 - MSTB LTR MaLR -371 55 2 2006 148 0 0 chr5 48865947 48866251 -150763899 + AluSq SINE Alu 1 304 -9 2574 116 97 5 chr5 48866644 48867048 -150763102 + MLT2A1 LTR ERVL 4 444 0 18408 104 7 20 chr5 48867048 48869741 -150760409 + HERVL-A1 LTR ERVL 1 2658 -2996 2034 259 77 22 chr5 48869865 48870876 -150759274 - L1M4 LINE L1 -1396 5248 4182 684 274 23 37 chr5 48870909 48871208 -150758942 + L1M4 LINE L1 1341 1635 -4907 455 274 14 94 chr5 48871211 48871423 -150758727 - L1M4 LINE L1 -6216 326 132 4588 184 32 12 chr5 48871432 48872985 -150757165 + L1PA16 LINE L1 4575 6159 -7 274 237 31 72 chr5 48872984 48873081 -150757069 - L1M4 LINE L1 -6434 108 16 * 1319 218 26 49 chr5 48873142 48873449 -150756701 + AluJo SINE Alu 1 300 -12 218 315 112 66 chr5 48874133 48874330 -150755820 - L2 LINE L2 -1837 1477 1272 1345 248 57 55 chr5 48874355 48874830 -150755320 - MLT2B1 LTR ERVL -44 476 1 1798 146 159 26 chr5 48875177 48875555 -150754595 - MSTA LTR MaLR 0 428 1 5896 192 24 18 chr5 48875647 48877943 -150752207 + L1PA16 LINE L1 3829 6164 -2 349 271 96 68 chr5 48877944 48878236 -150751914 + L1ME3A LINE L1 4622 4921 -1225 1181 296 118 16 chr5 48878238 48878924 -150751226 + L1ME3A LINE L1 5374 6129 -41 1716 120 4 0 chr5 48880835 48881068 -150749082 - AluSx SINE Alu -45 267 34 367 145 0 92 chr5 48881101 48881177 -150748973 + Charlie3 DNA MER1_type 1 69 -2641 2013 141 7 0 chr5 48882169 48882468 -150747682 + AluSq SINE Alu 6 306 -7 929 233 150 109 chr5 48883839 48884427 -150745723 - MLT1E1 LTR MaLR -37 617 6 290 339 39 15 chr5 48884482 48884612 -150745538 + MIR3 SINE MIR 44 176 -32 323 49 0 0 chr5 48884680 48884721 -150745429 - MADE1 DNA Mariner 0 80 40 1071 319 163 6 chr5 48885353 48886070 -150744080 + L2 LINE L2 1572 2401 -913 284 358 52 36 chr5 48886947 48887254 -150742896 - HERVL LTR ERVL -2297 3357 3046 757 216 42 84 chr5 48887741 48888028 -150742122 + MER52A LTR ERV1 398 672 -1083 * 2330 214 12 0 chr5 48888022 48888453 -150741697 + MER52A LTR ERV1 1320 1755 0 597 223 137 0 chr5 48888462 48888653 -150741497 + MLT1D LTR MaLR 284 467 0 233 310 9 35 chr5 48888658 48888774 -150741376 + L1M4 LINE L1 3284 3396 -2750 640 282 29 12 chr5 48888868 48889113 -150741037 + L1MD3 LINE L1 7728 7976 -19 2127 123 0 0 chr5 48889121 48889422 -150740728 + AluSc SINE Alu 1 301 -8 370 196 44 101 chr5 48889468 48889588 -150740562 - Charlie7 DNA MER1_type -903 1709 1599 2447 71 0 0 chr5 48889588 48889899 -150740251 - AluY SINE Alu 0 311 1 370 196 44 101 chr5 48889899 48889936 -150740214 - Charlie7 DNA MER1_type -1013 1599 1561 21 36 0 0 chr5 48890008 48890036 -150740114 + AT_rich Low_complexity Low_complexity 1 28 0 33 0 0 0 chr5 48890168 48890201 -150739949 + AT_rich Low_complexity Low_complexity 1 33 0 1570 207 0 17 chr5 48890286 48890399 -150739751 + AluJb SINE Alu 3 116 -196 240 35 0 0 chr5 48890399 48890428 -150739722 + (CA)n Simple_repeat Simple_repeat 2 30 0 1570 207 0 17 chr5 48890428 48890609 -150739541 + AluJb SINE Alu 116 292 -20 253 292 83 33 chr5 48891305 48891425 -150738725 - MIR SINE MIR -37 225 100 222 253 0 0 chr5 48891553 48891636 -150738514 + (TATG)n Simple_repeat Simple_repeat 2 84 0 261 134 23 64 chr5 48891658 48891829 -150738321 + (TA)n Simple_repeat Simple_repeat 1 164 0 1543 268 61 25 chr5 48892772 48893669 -150736481 + L1P3 LINE L1 1 1035 -4840 282 56 0 0 chr5 48893882 48893918 -150736232 + (TC)n Simple_repeat Simple_repeat 1 36 0 550 333 77 38 chr5 48894624 48895015 -150735135 - L2 LINE L2 -2768 546 141 189 74 0 0 chr5 48895403 48895430 -150734720 + (A)n Simple_repeat Simple_repeat 1 27 0 1363 203 20 37 chr5 48895540 48895889 -150734261 - MLT1A1 LTR MaLR 0 365 23 538 281 104 37 chr5 48895905 48896367 -150733783 + Charlie2 DNA MER1_type 1888 2380 -482 477 367 68 21 chr5 48896730 48897204 -150732946 + L2 LINE L2 2282 2777 -537 709 186 36 0 chr5 48897457 48897624 -150732526 - L1MB7 LINE L1 -9 6175 6003 2049 236 62 62 chr5 48897621 48898101 -150732049 - L1MB7 LINE L1 -193 5975 5497 1923 142 3 29 chr5 48898101 48898412 -150731738 - AluSx SINE Alu -3 309 7 2049 236 62 62 chr5 48898412 48899379 -150730771 - L1MB7 LINE L1 -671 5497 4568 21 0 0 0 chr5 48899500 48899521 -150730629 + AT_rich Low_complexity Low_complexity 1 21 0 269 343 55 30 chr5 48900163 48900364 -150729786 + MIR SINE MIR 1 206 -56 22 0 0 0 chr5 48900497 48900519 -150729631 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr5 48901350 48901377 -150728773 + AT_rich Low_complexity Low_complexity 1 27 0 248 313 83 0 chr5 48901654 48901750 -150728400 + MIR SINE MIR 113 216 -46 2397 40 0 52 chr5 48902050 48902377 -150727773 + AluY SINE Alu 1 310 -1 213 135 27 0 chr5 48902655 48902692 -150727458 + GA-rich Low_complexity Low_complexity 2 39 0 610 261 137 13 chr5 48903020 48903254 -150726896 + MLT1I LTR MaLR 147 409 0 272 339 38 33 chr5 48903254 48903437 -150726713 - L2 LINE L2 -736 2578 2395 44 0 0 0 chr5 48903978 48904022 -150726128 + AT_rich Low_complexity Low_complexity 1 44 0 356 259 86 17 chr5 48905316 48905490 -150724660 - L1ME3 LINE L1 -9 6153 5968 600 277 39 17 chr5 48905513 48905744 -150724406 + L1M4 LINE L1 25 260 -6282 1367 309 59 32 chr5 48905761 48905896 -150724254 + L1M4 LINE L1 323 453 -6089 198 0 0 0 chr5 48905896 48905918 -150724232 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1367 309 59 32 chr5 48905918 48906412 -150723738 + L1M4 LINE L1 453 969 -5573 577 214 69 11 chr5 48906405 48906681 -150723469 + L1 LINE L1 3193 3557 -2589 * 680 179 0 8 chr5 48906683 48906817 -150723333 + L1MA8 LINE L1 6020 6152 -139 362 340 123 8 chr5 48908012 48908247 -150721903 + MLT1I LTR MaLR 1 262 -147 701 278 67 34 chr5 48908634 48909074 -150721076 - L1M4 LINE L1 -1313 4833 4373 60 27 0 0 chr5 48909074 48909148 -150721002 + AT_rich Low_complexity Low_complexity 1 74 0 1578 197 13 20 chr5 48909326 48909631 -150720519 + AluJb SINE Alu 1 303 -9 295 373 0 0 chr5 48909714 48909832 -150720318 - HERV16 LTR ERVL -2389 3096 2979 414 257 38 9 chr5 48909906 48910011 -150720139 - HERV16 LTR ERVL -3670 1326 1219 540 278 66 26 chr5 48910040 48910267 -150719883 - HERV16 LTR ERVL -3830 1166 931 917 91 68 0 chr5 48910277 48910409 -150719741 + MSTA LTR MaLR 1 141 -287 3409 194 37 18 chr5 48910420 48911519 -150718631 - L1M2 LINE L1 -645 5667 4549 7491 129 20 0 chr5 48911551 48912680 -150717470 - THE1B-int LTR MaLR -428 1152 1 1876 178 40 9 chr5 48912682 48913031 -150717119 - THE1B LTR MaLR -2 362 3 3094 206 16 6 chr5 48913033 48913721 -150716429 - L1M4 LINE L1 -1802 4344 3650 198 103 0 0 chr5 48914349 48914378 -150715772 + (TC)n Simple_repeat Simple_repeat 2 30 0 2583 150 58 14 chr5 48914378 48914892 -150715258 - Tigger3(Golem) DNA MER2_type -2 3027 2491 1249 148 16 20 chr5 48914892 48915142 -150715008 - AluSx SINE Alu -17 295 47 204 355 21 11 chr5 48915464 48915557 -150714593 + MIR SINE MIR 45 138 -124 231 325 0 12 chr5 48916805 48916888 -150713262 - MLT1E LTR MaLR -511 82 1 1260 241 26 60 chr5 48916888 48917303 -150712847 + L1M4 LINE L1 3659 4056 -2090 1378 208 115 20 chr5 48917303 48917659 -150712491 + MLT1B LTR MaLR 1 390 0 1260 241 26 60 chr5 48917659 48917740 -150712410 + L1M4 LINE L1 4056 4138 -2008 1958 110 0 27 chr5 48918234 48918535 -150711615 - AluSx SINE Alu -17 295 3 189 0 0 0 chr5 48918538 48918559 -150711591 + (T)n Simple_repeat Simple_repeat 1 21 0 1354 232 133 60 chr5 48918560 48919465 -150710685 + L1M4 LINE L1 4110 5104 -1042 621 185 23 23 chr5 48920484 48920614 -150709536 + MLT1H LTR MaLR 381 510 -39 245 137 39 0 chr5 48921537 48921588 -150708562 + CT-rich Low_complexity Low_complexity 4 56 0 25 0 0 0 chr5 48921755 48921780 -150708370 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 48922381 48922404 -150707746 + AT_rich Low_complexity Low_complexity 1 23 0 30 52 0 39 chr5 48922560 48922637 -150707513 + AT_rich Low_complexity Low_complexity 1 74 0 240 59 0 0 chr5 48922692 48922726 -150707424 + (CA)n Simple_repeat Simple_repeat 2 35 0 24 67 0 0 chr5 48923060 48923105 -150707045 + AT_rich Low_complexity Low_complexity 1 45 0 3014 93 40 5 chr5 48923648 48923686 -150706464 - MLT2A1 LTR ERVL 0 444 409 491 45 15 0 chr5 48923686 48923752 -150706398 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 3014 93 40 5 chr5 48923752 48924141 -150706009 - MLT2A1 LTR ERVL -35 409 2 2036 80 3 0 chr5 48924142 48924429 -150705721 - HERVL-A1 LTR ERVL 0 5654 5367 360 0 0 0 chr5 48925151 48925191 -150704959 + (A)n Simple_repeat Simple_repeat 1 40 0 204 320 39 13 chr5 48925833 48925911 -150704239 + L2 LINE L2 3222 3301 -12 493 225 28 49 chr5 48926027 48926169 -150703981 + MLT1A2 LTR MaLR 1 139 -226 228 122 0 0 chr5 48926250 48926291 -150703859 + (GA)n Simple_repeat Simple_repeat 2 42 0 1847 237 21 5 chr5 48926291 48926709 -150703441 + MSTB LTR MaLR 2 426 0 6565 218 46 11 chr5 48926720 48928084 -150702066 + MSTB-int LTR MaLR 6 1417 -234 1846 145 49 20 chr5 48928138 48928482 -150701668 - L1PB3 LINE L1 -2 6152 5799 242 220 0 0 chr5 48928482 48928532 -150701618 + MSTB-int LTR MaLR 1414 1463 -188 860 199 42 0 chr5 48928538 48928704 -150701446 + MSTB LTR MaLR 239 411 -15 279 0 0 0 chr5 48928713 48928744 -150701406 + (CA)n Simple_repeat Simple_repeat 2 32 0 643 272 5 21 chr5 48928747 48928938 -150701212 + MLT1A2 LTR MaLR 187 374 0 243 0 0 0 chr5 48929084 48929111 -150701039 + (A)n Simple_repeat Simple_repeat 1 27 0 507 305 149 19 chr5 48929114 48929429 -150700721 - L2 LINE L2 -774 2540 2185 406 321 119 22 chr5 48929430 48929741 -150700409 - L2 LINE L2 -1332 1982 1642 1808 127 24 3 chr5 48929775 48930067 -150700083 + AluSg SINE Alu 3 300 -10 207 100 0 0 chr5 48930068 48930098 -150700052 + (GGAA)n Simple_repeat Simple_repeat 1 30 0 1964 61 389 162 chr5 48930100 48930674 -150699476 - LTR12 LTR ERV1 -3 711 8 183 100 0 0 chr5 48930675 48930705 -150699445 + (GGAA)n Simple_repeat Simple_repeat 4 33 0 588 314 106 16 chr5 48930705 48931008 -150699142 - L2 LINE L2 -1686 1628 1299 186 373 45 0 chr5 48931204 48931271 -150698879 + L2 LINE L2 3153 3222 -50 2549 58 0 0 chr5 48931903 48932212 -150697938 + AluY SINE Alu 1 309 -2 209 336 46 38 chr5 48932215 48932453 -150697697 + L2 LINE L2 2266 2505 -809 2027 117 3 16 chr5 48933897 48934204 -150695946 - AluSq SINE Alu -10 303 1 252 130 0 0 chr5 48935528 48935574 -150694576 + (TC)n Simple_repeat Simple_repeat 1 46 0 1593 131 24 57 chr5 48935987 48936311 -150693839 - AluSx SINE Alu 0 314 1 2411 64 10 10 chr5 48936484 48936795 -150693355 - AluY SINE Alu 0 311 1 44 35 0 0 chr5 48936890 48936948 -150693202 + AT_rich Low_complexity Low_complexity 1 58 0 304 228 97 53 chr5 48937497 48937611 -150692539 + L1MEc LINE L1 2147 2265 -4131 1078 304 42 4 chr5 48937660 48938111 -150692039 + L1ME3 LINE L1 5515 5982 -180 * 3397 255 63 34 chr5 48938110 48939969 -150690181 - L1MB7 LINE L1 -8 6176 4231 231 36 0 0 chr5 48939969 48939997 -150690153 + (TG)n Simple_repeat Simple_repeat 2 29 0 3397 255 63 34 chr5 48939997 48940574 -150689576 - L1MB7 LINE L1 -1953 4231 3672 563 283 84 11 chr5 48940562 48941003 -150689147 - L1MB7 LINE L1 -2780 3366 2894 * 830 227 28 26 chr5 48941011 48941357 -150688793 + L1M1 LINE L1 3315 3743 -3822 312 146 19 39 chr5 48941438 48941541 -150688609 + (CATATA)n Simple_repeat Simple_repeat 2 102 0 527 106 11 78 chr5 48941568 48941929 -150688221 + (TA)n Simple_repeat Simple_repeat 1 336 0 6034 227 45 14 chr5 48942033 48942137 -150688013 - L1 LINE L1 -2351 5214 5115 198 0 0 0 chr5 48942137 48942159 -150687991 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 6034 227 45 14 chr5 48942159 48943921 -150686229 - L1 LINE L1 -2450 5115 3281 576 198 0 86 chr5 48943950 48944083 -150686067 + MER4E LTR ERV1 1 222 -650 2097 122 0 0 chr5 48944083 48944377 -150685773 - AluSg SINE Alu -16 294 1 576 198 0 86 chr5 48944377 48944436 -150685714 + MER4E LTR ERV1 222 284 -588 * 1477 207 41 32 chr5 48944433 48944776 -150685374 + MER4D LTR ERV1 546 891 -12 342 264 125 7 chr5 48944836 48944980 -150685170 - L1 LINE L1 -4357 3208 3048 2812 189 64 7 chr5 48944981 48945546 -150684604 + Tigger1 DNA MER2_type 1 597 -1821 21 0 0 0 chr5 48946135 48946156 -150683994 + AT_rich Low_complexity Low_complexity 1 21 0 2264 239 42 16 chr5 48947165 48947713 -150682437 + REP3 LTR ERV 1 562 0 1468 198 13 48 chr5 48947896 48948348 -150681802 - MLT1D LTR MaLR 0 505 1 657 271 48 33 chr5 48949865 48950075 -150680075 + MER58A DNA MER1_type 2 214 -10 416 248 9 0 chr5 48950326 48950439 -150679711 + LTR43 LTR ERV1 180 293 -309 2171 161 36 5 chr5 48950598 48951015 -150679135 + L1MB1 LINE L1 5430 5859 -309 517 207 0 14 chr5 48951015 48951160 -150678990 + CT-rich Low_complexity Low_complexity 3 145 0 1524 206 0 7 chr5 48951160 48951442 -150678708 - AluJo SINE Alu -32 280 1 1513 155 73 16 chr5 48951445 48951748 -150678402 + L1MB1 LINE L1 5845 6164 -4 301 340 11 0 chr5 48953250 48953344 -150676806 + MIR3 SINE MIR 76 170 -38 2420 79 0 0 chr5 48953534 48953826 -150676324 + AluSc SINE Alu 6 297 -12 344 326 85 13 chr5 48953975 48954199 -150675951 - MIR SINE MIR -21 241 2 1574 201 27 27 chr5 48954265 48954634 -150675516 + MLT1A2 LTR MaLR 4 372 -2 297 0 0 0 chr5 48954692 48954725 -150675425 + (A)n Simple_repeat Simple_repeat 1 33 0 594 167 28 0 chr5 48955085 48955193 -150674957 + MLT1C LTR MaLR 1 111 -356 207 69 0 0 chr5 48956565 48956594 -150673556 + (TTC)n Simple_repeat Simple_repeat 2 30 0 1582 186 29 7 chr5 48956648 48956927 -150673223 - AluJo SINE Alu -19 293 9 304 280 32 72 chr5 48956976 48957101 -150673049 - L1MB8 LINE L1 -127 6046 5920 1319 220 74 59 chr5 48957101 48957621 -150672529 + MER39 LTR ERV1 1 701 -6 736 202 46 12 chr5 48957626 48957799 -150672351 - L1ME1 LINE L1 -243 5923 5745 1019 233 11 23 chr5 48957807 48958069 -150672081 + MLT1E1 LTR MaLR 389 497 -8 456 319 78 53 chr5 48958120 48958555 -150671595 - L2 LINE L2 -351 2963 2518 197 318 254 4 chr5 48959013 48959265 -150670885 - L2 LINE L2 -1302 2012 1698 1906 158 106 35 chr5 48960548 48960757 -150669393 - L1MB7 LINE L1 -59 6125 5932 2050 111 93 35 chr5 48960757 48961101 -150669049 + THE1B LTR MaLR 1 364 0 1906 158 106 35 chr5 48961101 48961346 -150668804 - L1MB7 LINE L1 -252 5932 5639 2088 191 115 11 chr5 48961469 48961931 -150668219 - MLT2B1 LTR ERVL -10 510 1 22 56 0 0 chr5 48962164 48962200 -150667950 + AT_rich Low_complexity Low_complexity 1 36 0 727 311 31 4 chr5 48962258 48962483 -150667667 + MIR SINE MIR 19 249 -13 27 92 0 0 chr5 48964244 48964320 -150665830 + AT_rich Low_complexity Low_complexity 1 76 0 234 0 0 0 chr5 48964364 48964390 -150665760 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 277 361 0 0 chr5 48964391 48964463 -150665687 - L2 LINE L2 -15 3257 3186 2553 270 82 77 chr5 48964467 48964546 -150665604 - L2 LINE L2 -12 3301 3224 2301 88 3 0 chr5 48964546 48964852 -150665298 + AluY SINE Alu 3 309 -2 2553 270 82 77 chr5 48964852 48964991 -150665159 - L2 LINE L2 -89 3224 3087 333 0 0 0 chr5 48964991 48965028 -150665122 + (TG)n Simple_repeat Simple_repeat 1 37 0 2553 270 82 77 chr5 48965028 48966388 -150663762 - L2 LINE L2 -226 3087 1716 634 179 43 0 chr5 48966943 48967060 -150663090 + MLT1C LTR MaLR 1 122 -345 2016 78 63 0 chr5 48967060 48967331 -150662819 + AluSq SINE Alu 1 288 -25 266 247 0 62 chr5 48967338 48967402 -150662748 + L1MB5 LINE L1 3445 3503 -2643 2019 154 0 7 chr5 48967402 48967701 -150662449 + AluJb SINE Alu 3 299 -13 266 247 0 62 chr5 48967701 48967733 -150662417 + L1MB5 LINE L1 3503 3535 -2611 5359 205 91 44 chr5 48967744 48968422 -150661728 + L1MB5 LINE L1 3837 4482 -1692 1693 166 37 64 chr5 48968422 48968796 -150661354 - MLT1A1 LTR MaLR 0 365 2 5359 205 91 44 chr5 48968796 48969736 -150660414 + L1MB5 LINE L1 4482 5589 -585 2482 74 0 6 chr5 48969736 48970048 -150660102 + AluY SINE Alu 1 310 -1 5359 205 91 44 chr5 48970048 48970639 -150659511 + L1MB5 LINE L1 5589 6151 -23 23 68 0 0 chr5 48971491 48971535 -150658615 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr5 48973928 48973949 -150656201 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 48974477 48974508 -150655642 + AT_rich Low_complexity Low_complexity 1 31 0 893 286 5 5 chr5 48977018 48977235 -150652915 + MIR SINE MIR 43 259 -3 183 339 118 39 chr5 48977332 48977459 -150652691 + MIR3 SINE MIR 24 160 -48 215 293 53 0 chr5 48977462 48977537 -150652613 - MIR3 SINE MIR -6 202 124 23 33 0 0 chr5 48979197 48979227 -150650923 + AT_rich Low_complexity Low_complexity 1 30 0 330 246 201 0 chr5 48979527 48979661 -150650489 - LTR33 LTR ERVL -348 173 13 420 206 11 56 chr5 48980120 48980300 -150649850 + (TTATA)n Simple_repeat Simple_repeat 5 176 0 229 152 61 45 chr5 48980496 48980562 -150649588 + L1MC4 LINE L1 6637 6703 -1339 285 279 0 15 chr5 48980562 48980698 -150649452 + (TA)n Simple_repeat Simple_repeat 2 135 0 388 313 216 19 chr5 48980797 48981168 -150648982 - L2 LINE L2 -47 3266 2823 1366 287 121 29 chr5 48981182 48981803 -150648347 - L2 LINE L2 -640 2674 1997 1738 182 0 13 chr5 48981803 48982110 -150648040 + AluJo SINE Alu 1 303 -9 1811 103 82 17 chr5 48982776 48983068 -150647082 + AluSx SINE Alu 1 311 -1 187 313 24 48 chr5 48985404 48985487 -150644663 - L2 LINE L2 -13 3300 3220 180 264 56 28 chr5 48985626 48985698 -150644452 - L2 LINE L2 -214 3058 2985 276 257 14 0 chr5 48986384 48986458 -150643692 - LTR37A LTR ERV1 -241 185 111 1341 270 39 67 chr5 48986712 48987430 -150642720 - MER31-int LTR ERV1 -835 4101 3404 254 332 78 66 chr5 48988322 48988378 -150641772 - MLT1K LTR MaLR -6 582 528 1348 115 60 23 chr5 48988378 48988596 -150641554 + MER30 DNA MER1_type 5 230 0 254 332 78 66 chr5 48988596 48988783 -150641367 - MLT1K LTR MaLR -60 528 336 222 37 0 0 chr5 48989457 48989484 -150640666 + (TA)n Simple_repeat Simple_repeat 1 27 0 2285 73 0 51 chr5 48989484 48989800 -150640350 - AluSg1 SINE Alu -9 300 1 730 307 79 59 chr5 48989823 48990227 -150639923 - L2 LINE L2 -3 3269 2858 1483 197 53 11 chr5 48990299 48990583 -150639567 + AluJb SINE Alu 6 301 -11 27 0 0 0 chr5 48990973 48991000 -150639150 + AT_rich Low_complexity Low_complexity 1 27 0 2073 131 6 3 chr5 48991549 48991861 -150638289 - AluSq SINE Alu 0 313 1 264 330 108 52 chr5 48992107 48992919 -150637231 - L2 LINE L2 -1707 1607 750 332 196 214 18 chr5 48993398 48993498 -150636652 + AluJb SINE Alu 3 128 -174 225 0 0 0 chr5 48993498 48993523 -150636627 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 332 196 214 18 chr5 48993523 48993534 -150636616 + AluJb SINE Alu 128 136 -166 419 321 37 23 chr5 48995117 48995335 -150634815 - MIR SINE MIR -5 257 37 673 198 43 188 chr5 48995945 48996313 -150633837 + L1MD2 LINE L1 5914 6228 -14 193 308 0 0 chr5 48996456 48996508 -150633642 + L2 LINE L2 3216 3267 -5 1481 187 11 15 chr5 48996526 48996793 -150633357 + AluJo SINE Alu 26 291 -21 252 77 0 0 chr5 48996898 48996937 -150633213 + (T)n Simple_repeat Simple_repeat 1 39 0 1139 249 186 35 chr5 48997098 48997519 -150632631 - L1MEc LINE L1 -3383 2832 2476 1694 35 0 10 chr5 48997519 48997722 -150632428 - AluY SINE Alu -1 310 110 1139 249 186 35 chr5 48997722 48997951 -150632199 - L1MEc LINE L1 -3739 2476 2283 189 0 0 0 chr5 48997951 48997972 -150632178 + (TG)n Simple_repeat Simple_repeat 2 22 0 1139 249 186 35 chr5 48997972 48998785 -150631365 - L1MEc LINE L1 -3932 2283 1169 573 246 101 42 chr5 48998794 48999082 -150631068 - L1MEc LINE L1 -5285 920 616 340 298 56 43 chr5 48999103 48999264 -150630886 - L2 LINE L2 -22 3291 3129 26 0 0 0 chr5 48999305 48999331 -150630819 + AT_rich Low_complexity Low_complexity 1 26 0 305 344 25 18 chr5 49001842 49002005 -150628145 - L1M4 LINE L1 -2157 3989 3826 354 261 116 43 chr5 49003288 49003426 -150626724 + MIR SINE MIR 6 153 -109 21 57 0 0 chr5 49003498 49003533 -150626617 + AT_rich Low_complexity Low_complexity 1 35 0 231 204 0 0 chr5 49003871 49003920 -150626230 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 11049 50 5 2 chr5 49003920 49006086 -150624064 - L1PA5 LINE L1 -9 6145 3977 191 237 184 0 chr5 49006225 49006301 -150623849 - MIR3 SINE MIR -5 203 114 2230 173 196 36 chr5 49006363 49006940 -150623210 - L1MA9 LINE L1 -22 6290 5622 393 249 133 23 chr5 49006938 49007111 -150623039 + L1 LINE L1 3373 3564 -2582 * 836 116 31 8 chr5 49008818 49008947 -150621203 - AluSq/x SINE Alu -180 132 1 2191 96 3 3 chr5 49014714 49015015 -150615135 + AluSp SINE Alu 2 302 -11 405 276 32 44 chr5 49016678 49017002 -150613148 + MLT1I LTR MaLR 1 395 -14 210 191 0 0 chr5 49017726 49017768 -150612382 + (TG)n Simple_repeat Simple_repeat 2 43 0 34 42 0 0 chr5 49019379 49019427 -150610723 + AT_rich Low_complexity Low_complexity 1 48 0 283 250 199 6 chr5 49019489 49019645 -150610505 + L1ME4a LINE L1 5933 6118 -3 344 283 116 56 chr5 49019766 49020017 -150610133 - L1ME4a LINE L1 -216 5905 5640 200 125 47 62 chr5 49020369 49020433 -150609717 + (CGGGA)n Simple_repeat Simple_repeat 5 67 0 225 56 19 74 chr5 49020454 49020508 -150609642 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 454 236 18 0 chr5 49020515 49020625 -150609525 + MER58C DNA MER1_type 104 215 0 317 125 18 0 chr5 49020889 49020945 -150609205 + (TA)n Simple_repeat Simple_repeat 1 57 0 2212 112 3 0 chr5 49020948 49021244 -150608906 - AluSq SINE Alu -16 297 1 9243 146 40 20 chr5 49021507 49022470 -150607680 - L1MA6 LINE L1 0 6300 5358 1995 135 3 10 chr5 49022470 49022781 -150607369 - AluSx SINE Alu -1 311 3 9243 146 40 20 chr5 49022781 49022805 -150607345 - L1MA6 LINE L1 -942 5358 5336 195 42 0 0 chr5 49022805 49022829 -150607321 + (TTTG)n Simple_repeat Simple_repeat 4 27 0 9243 146 40 20 chr5 49022829 49023619 -150606531 - L1MA6 LINE L1 -964 5336 4563 5817 94 39 50 chr5 49023619 49025364 -150604786 - SVA Other Other -589 1386 28 9243 146 40 20 chr5 49025364 49026242 -150603908 - L1MA6 LINE L1 -1737 4563 3584 189 300 0 20 chr5 49026618 49026668 -150603482 - L2 LINE L2 -13 3300 3252 * 453 355 50 0 chr5 49026665 49026865 -150603285 + MIR SINE MIR 25 234 -28 579 275 90 28 chr5 49026883 49027094 -150603056 + MIR SINE MIR 37 260 -2 23 0 0 0 chr5 49027766 49027789 -150602361 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr5 49028441 49028477 -150601673 + AT_rich Low_complexity Low_complexity 1 36 0 180 309 0 0 chr5 49028684 49028726 -150601424 + L2 LINE L2 3255 3296 -17 387 141 0 0 chr5 49028961 49029025 -150601125 + (CA)n Simple_repeat Simple_repeat 1 64 0 710 272 190 32 chr5 49029042 49029518 -150600632 - MLT1G1 LTR MaLR 0 595 1 22 35 0 0 chr5 49029745 49029774 -150600376 + AT_rich Low_complexity Low_complexity 1 29 0 308 342 75 25 chr5 49030818 49031017 -150599133 - L1MEd LINE L1 -4969 1150 942 441 296 48 87 chr5 49031338 49031798 -150598352 + LTR16A1 LTR ERVL 12 453 -4 520 245 43 143 chr5 49032544 49032936 -150597214 - LTR33A LTR ERVL -3 520 168 444 219 142 35 chr5 49033005 49033174 -150596976 - LTR33A LTR ERVL -332 191 5 467 169 138 8 chr5 49034697 49034827 -150595323 - L1MC3 LINE L1 0 7785 7639 2499 293 86 35 chr5 49035624 49036147 -150594003 + L2 LINE L2 1472 1967 -1347 1751 183 0 10 chr5 49036147 49036453 -150593697 - AluJo SINE Alu -9 303 1 2499 293 86 35 chr5 49036453 49037074 -150593076 + L2 LINE L2 1967 2674 -640 379 313 216 19 chr5 49037088 49037459 -150592691 + L2 LINE L2 2823 3266 -47 285 279 0 15 chr5 49037558 49037694 -150592456 + (TA)n Simple_repeat Simple_repeat 2 135 0 238 152 61 45 chr5 49037694 49037760 -150592390 - L1MC4 LINE L1 -1339 6703 6637 271 147 35 56 chr5 49037967 49038110 -150592040 + (TATAA)n Simple_repeat Simple_repeat 5 144 0 319 246 201 0 chr5 49038575 49038709 -150591441 + LTR33 LTR ERVL 13 173 -348 23 33 0 0 chr5 49039008 49039038 -150591112 + AT_rich Low_complexity Low_complexity 1 30 0 217 293 53 0 chr5 49040698 49040773 -150589377 + MIR3 SINE MIR 124 202 -6 189 339 118 39 chr5 49040776 49040903 -150589247 - MIR3 SINE MIR -48 160 24 881 290 5 5 chr5 49041000 49041217 -150588933 - MIR SINE MIR -3 259 43 196 354 143 11 chr5 49042821 49042996 -150587154 + MIR SINE MIR 65 262 0 24 32 0 0 chr5 49043733 49043764 -150586386 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 49044292 49044313 -150585837 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr5 49046708 49046753 -150583397 + AT_rich Low_complexity Low_complexity 1 45 0 5496 204 91 44 chr5 49047605 49048196 -150581954 - L1MB5 LINE L1 -23 6649 6087 2447 74 0 6 chr5 49048196 49048508 -150581642 - AluY SINE Alu -1 310 1 5496 204 91 44 chr5 49048508 49049448 -150580702 - L1MB5 LINE L1 -585 6087 4980 1672 166 37 64 chr5 49049448 49049822 -150580328 + MLT1A1 LTR MaLR 2 365 0 5496 204 91 44 chr5 49049822 49050500 -150579650 - L1MB5 LINE L1 -1692 4980 4335 813 235 48 80 chr5 49050511 49050543 -150579607 - L1MB5 LINE L1 -2611 4033 4002 1997 154 0 7 chr5 49050543 49050842 -150579308 - AluJb SINE Alu -13 299 3 813 235 48 80 chr5 49050842 49050913 -150579237 - L1MB5 LINE L1 -2642 4002 3930 1950 96 59 0 chr5 49050913 49051185 -150578965 - AluSp SINE Alu -25 288 1 813 235 48 80 chr5 49051185 49051454 -150578696 - L1MB5 LINE L1 -2714 3930 3672 3845 245 108 36 chr5 49051486 49052105 -150578045 - L1MB5 LINE L1 -3579 3065 2492 1415 185 24 47 chr5 49052105 49052403 -150577747 - AluJo SINE Alu -21 291 1 3845 245 108 36 chr5 49052403 49054218 -150575932 - L1MB5 LINE L1 -4152 2492 192 3226 129 4 21 chr5 49054218 49054737 -150575413 + MER75 DNA T2_type 1 510 -4 3845 245 108 36 chr5 49054737 49054942 -150575208 - L1MB5 LINE L1 -6452 192 3 362 322 49 31 chr5 49055096 49055305 -150574845 - MIR SINE MIR -15 247 38 482 297 104 40 chr5 49055861 49056083 -150574067 - MIR SINE MIR -10 252 17 21 0 0 0 chr5 49056624 49056645 -150573505 + AT_rich Low_complexity Low_complexity 1 21 0 929 184 99 162 chr5 49057900 49058556 -150571594 - LTR34 LTR ERV1 -4 695 1 265 286 12 24 chr5 49059382 49059466 -150570684 - MIR SINE MIR -66 196 114 11549 35 2 0 chr5 49061386 49063551 -150566599 - L1PA6 LINE L1 -3 6151 3984 204 97 0 0 chr5 49063613 49063644 -150566506 + (CA)n Simple_repeat Simple_repeat 2 32 0 266 259 47 12 chr5 49066798 49066883 -150563267 + L1ME3 LINE L1 6075 6162 0 1694 167 10 19 chr5 49068009 49068321 -150561829 - AluSx SINE Alu -3 309 1 860 143 0 0 chr5 49068337 49068470 -150561680 - FLAM_C SINE Alu 0 133 1 301 333 101 13 chr5 49068581 49068740 -150561410 - MLT1J2 LTR MaLR -14 436 264 2298 93 0 13 chr5 49069219 49069532 -150560618 - AluSq SINE Alu 0 313 5 719 297 119 31 chr5 49070411 49070771 -150559379 + L2 LINE L2 2894 3285 -28 189 320 0 12 chr5 49073595 49073696 -150556454 + MIR SINE MIR 24 122 -86 365 242 94 20 chr5 49074065 49074214 -150555936 - MER67A LTR ERV1 0 543 384 356 289 24 54 chr5 49074367 49074533 -150555617 - MER67B LTR ERV1 -500 161 1 1487 150 54 77 chr5 49078393 49078706 -150551444 + AluSx SINE Alu 5 310 -2 23 0 0 0 chr5 49079961 49079984 -150550166 + AT_rich Low_complexity Low_complexity 1 23 0 241 301 0 14 chr5 49079990 49080063 -150550087 - L2 LINE L2 0 3313 3242 249 33 0 0 chr5 49080608 49080638 -150549512 + (TG)n Simple_repeat Simple_repeat 1 30 0 457 241 91 10 chr5 49080998 49081199 -150548951 - MLT1H1 LTR MaLR 0 590 338 232 239 0 0 chr5 49081185 49081231 -150548919 - MLT1J2 LTR MaLR -414 135 90 * 25 0 0 0 chr5 49082314 49082339 -150547811 + AT_rich Low_complexity Low_complexity 1 25 0 904 268 42 48 chr5 49082821 49083176 -150546974 - L2 LINE L2 -10 3303 2951 21 36 0 0 chr5 49084957 49084985 -150545165 + AT_rich Low_complexity Low_complexity 1 28 0 2052 128 20 0 chr5 49085050 49085354 -150544796 + AluSx SINE Alu 1 310 -2 324 306 91 21 chr5 49086127 49086313 -150543837 - LTR33 LTR ERVL 0 521 323 376 282 21 14 chr5 49086326 49086468 -150543682 - LTR33 LTR ERVL -378 143 1 477 137 0 14 chr5 49088794 49088867 -150541283 - FLAM SINE Alu -21 122 51 335 191 0 11 chr5 49089443 49089537 -150540613 + CT-rich Low_complexity Low_complexity 2 94 0 353 248 37 0 chr5 49090008 49090117 -150540033 + MER112 DNA MER1_type 148 260 0 24 53 0 0 chr5 49091931 49091969 -150538181 + AT_rich Low_complexity Low_complexity 1 38 0 26 64 0 0 chr5 49092771 49092818 -150537332 + AT_rich Low_complexity Low_complexity 1 47 0 23 33 0 0 chr5 49093152 49093182 -150536968 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 49095021 49095043 -150535107 + AT_rich Low_complexity Low_complexity 1 22 0 405 0 0 0 chr5 49098792 49098837 -150531313 + (TG)n Simple_repeat Simple_repeat 1 45 0 189 0 0 0 chr5 49098836 49098857 -150531293 + (GA)n Simple_repeat Simple_repeat 1 21 0 * 230 355 50 40 chr5 49098982 49099283 -150530867 + L2 LINE L2 2224 2527 -787 441 227 119 87 chr5 49099555 49099890 -150530260 + L2 LINE L2 2615 2960 -354 194 297 127 17 chr5 49102660 49102778 -150527372 + L2 LINE L2 3182 3312 -1 250 310 51 63 chr5 49104477 49104732 -150525418 + L2 LINE L2 2804 3055 -217 223 308 96 19 chr5 49105076 49105180 -150524970 + L2 LINE L2 3155 3266 -6 237 234 43 53 chr5 49105787 49105881 -150524269 - L2 LINE L2 -32 3240 3148 531 344 27 11 chr5 49105915 49106101 -150524049 - MIR SINE MIR -28 234 46 560 268 81 89 chr5 49107009 49107513 -150522637 + LTR33A LTR ERVL 7 506 -17 213 250 0 0 chr5 49107519 49107559 -150522591 + L2 LINE L2 3237 3276 -37 2229 103 10 0 chr5 49107605 49107897 -150522253 - AluSx SINE Alu -17 295 1 5021 208 183 30 chr5 49109626 49111340 -150518810 - L1MDa LINE L1 -4556 1984 9 2312 75 0 0 chr5 49112470 49112751 -150517399 - AluY SINE Alu -10 301 21 275 0 29 0 chr5 49113898 49113933 -150516217 + (CA)n Simple_repeat Simple_repeat 2 37 0 230 277 46 15 chr5 49114501 49114566 -150515584 - MIR SINE MIR -106 102 36 207 273 0 0 chr5 49115338 49115393 -150514757 + T-rich Low_complexity Low_complexity 3 57 0 1632 198 45 58 chr5 49116445 49116975 -150513175 + Charlie1b DNA MER1_type 1 523 0 186 326 0 0 chr5 49118120 49118169 -150511981 - MIR SINE MIR -60 148 100 1839 162 93 31 chr5 49120352 49120392 -150509758 - MLT2D LTR ERVL 0 414 378 318 50 0 0 chr5 49120392 49120432 -150509718 + (TG)n Simple_repeat Simple_repeat 2 41 0 1839 162 93 31 chr5 49120432 49120779 -150509371 - MLT2D LTR ERVL -36 378 3 672 262 51 38 chr5 49122244 49122481 -150507669 - MIR SINE MIR -1 261 22 1427 237 51 13 chr5 49122996 49123389 -150506761 + MER119 DNA MER1_type 3 410 -173 1840 176 40 11 chr5 49123431 49123784 -150506366 - MLT1A1 LTR MaLR -2 363 1 858 320 78 48 chr5 49124092 49124911 -150505239 + L2 LINE L2 2434 3269 -44 24 0 0 0 chr5 49125086 49125110 -150505040 + AT_rich Low_complexity Low_complexity 1 24 0 7101 37 0 1 chr5 49125115 49126006 -150504144 - L1PA4 LINE L1 -12 6143 5254 21 36 0 0 chr5 49126590 49126618 -150503532 + AT_rich Low_complexity Low_complexity 1 28 0 2849 3 0 0 chr5 49127278 49127586 -150502564 - AluYa8 SINE Alu -2 308 1 1411 127 12 36 chr5 49129228 49129481 -150500669 + MER50 LTR ERV1 2 248 -486 * 1702 129 45 26 chr5 49129475 49129784 -150500366 + MER50 LTR ERV1 397 711 -23 2179 118 7 0 chr5 49130368 49130664 -150499486 + AluSq SINE Alu 3 300 -13 328 309 16 24 chr5 49130891 49131014 -150499136 + MIR3 SINE MIR 69 190 -18 327 238 259 0 chr5 49132376 49132523 -150497627 - MIR SINE MIR -49 213 29 276 339 0 48 chr5 49133441 49133545 -150496605 + MIR SINE MIR 54 154 -64 22 0 0 0 chr5 49133611 49133633 -150496517 + AT_rich Low_complexity Low_complexity 1 22 0 262 363 41 41 chr5 49133838 49134009 -150496141 + MIR SINE MIR 16 186 -76 2084 135 36 30 chr5 49134238 49134600 -150495550 + THE1B LTR MaLR 1 364 0 207 385 0 0 chr5 49135144 49135227 -150494923 + L2 LINE L2 3001 3083 -189 1545 185 0 21 chr5 49135287 49135608 -150494542 - AluJo SINE Alu 0 315 1 512 318 75 52 chr5 49135801 49136404 -150493746 - L2 LINE L2 -7 3306 2689 982 150 87 71 chr5 49138243 49138497 -150491653 - L1MA10 LINE L1 -36 6298 6041 * 1026 303 36 26 chr5 49138495 49139152 -150490998 - HAL1 LINE L1 -849 1658 995 252 103 39 77 chr5 49139129 49139207 -150490943 + L1MA10 LINE L1 6260 6334 0 * 1414 135 30 0 chr5 49139223 49139460 -150490690 - Tigger2 DNA MER2_type -10 2708 2465 4063 143 19 21 chr5 49139536 49140283 -150489867 - Tigger2 DNA MER2_type -1973 745 1 1696 212 110 40 chr5 49140347 49140927 -150489223 - L1MB1 LINE L1 -816 5330 4710 * 2720 164 19 11 chr5 49140926 49140964 -150489186 + L1MB1 LINE L1 5321 5357 -811 1861 174 27 21 chr5 49140964 49141337 -150488813 - THE1C LTR MaLR 0 375 1 2720 164 19 11 chr5 49141337 49141833 -150488317 + L1MB1 LINE L1 5357 5859 -309 355 214 9 18 chr5 49141835 49141947 -150488203 + CT-rich Low_complexity Low_complexity 4 114 0 1554 224 0 6 chr5 49141947 49142260 -150487890 - AluJo SINE Alu -1 311 1 1494 155 73 16 chr5 49142263 49142566 -150487584 + L1MB1 LINE L1 5845 6164 -4 296 340 11 0 chr5 49144037 49144131 -150486019 + MIR3 SINE MIR 76 170 -38 2431 81 3 0 chr5 49144317 49144613 -150485537 + AluSc SINE Alu 1 297 -12 342 326 85 13 chr5 49144762 49144986 -150485164 - MIR SINE MIR -21 241 2 1600 193 30 27 chr5 49145052 49145420 -150484730 + MLT1A2 LTR MaLR 4 372 -2 306 0 0 0 chr5 49145478 49145512 -150484638 + (A)n Simple_repeat Simple_repeat 1 34 0 22 0 0 0 chr5 49145625 49145647 -150484503 + AT_rich Low_complexity Low_complexity 1 22 0 558 167 28 0 chr5 49145872 49145980 -150484170 + MLT1C LTR MaLR 1 111 -356 207 69 0 0 chr5 49147351 49147380 -150482770 + (TTC)n Simple_repeat Simple_repeat 2 30 0 1648 187 29 4 chr5 49147435 49147713 -150482437 - AluJo SINE Alu -19 293 9 304 280 32 72 chr5 49147762 49147887 -150482263 - L1MB8 LINE L1 -127 6046 5920 267 189 278 11 chr5 49147887 49147977 -150482173 + MER34 LTR ERV1 1 114 -428 * 1178 219 56 61 chr5 49147946 49148407 -150481743 + MER39 LTR ERV1 243 701 -6 689 202 46 12 chr5 49148412 49148585 -150481565 - L1ME1 LINE L1 -243 5923 5745 936 256 16 16 chr5 49148593 49148843 -150481307 + MLT1E1 LTR MaLR 389 638 -16 483 323 78 51 chr5 49148906 49149340 -150480810 - L2 LINE L2 -351 2963 2518 195 318 254 4 chr5 49149798 49150050 -150480100 - L2 LINE L2 -1302 2012 1698 1784 158 106 35 chr5 49151334 49151543 -150478607 - L1MB7 LINE L1 -59 6125 5932 2058 111 93 35 chr5 49151543 49151887 -150478263 + THE1B LTR MaLR 1 364 0 1784 158 106 35 chr5 49151887 49152132 -150478018 - L1MB7 LINE L1 -252 5932 5639 1930 191 115 11 chr5 49152255 49152717 -150477433 - MLT2B1 LTR ERVL -10 510 1 22 56 0 0 chr5 49152950 49152986 -150477164 + AT_rich Low_complexity Low_complexity 1 36 0 714 311 31 4 chr5 49153044 49153269 -150476881 + MIR SINE MIR 19 249 -13 27 92 0 0 chr5 49155031 49155107 -150475043 + AT_rich Low_complexity Low_complexity 1 76 0 201 39 0 0 chr5 49155151 49155177 -150474973 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 274 361 0 0 chr5 49155178 49155250 -150474900 - L2 LINE L2 -15 3257 3186 2465 269 95 77 chr5 49155254 49155333 -150474817 - L2 LINE L2 -12 3301 3225 2358 85 0 0 chr5 49155333 49155640 -150474510 + AluY SINE Alu 3 309 -2 2465 269 95 77 chr5 49155640 49155779 -150474371 - L2 LINE L2 -88 3225 3090 261 0 0 0 chr5 49155779 49155808 -150474342 + (TG)n Simple_repeat Simple_repeat 1 29 0 2465 269 95 77 chr5 49155808 49157114 -150473036 - L2 LINE L2 -223 3090 1747 189 0 0 0 chr5 49157114 49157135 -150473015 + (GAAAA)n Simple_repeat Simple_repeat 3 23 0 2465 269 95 77 chr5 49157135 49157168 -150472982 - L2 LINE L2 -1566 1747 1716 1409 216 46 39 chr5 49157724 49157841 -150472309 + MLT1C LTR MaLR 1 116 -351 2372 70 0 13 chr5 49157841 49158142 -150472008 + AluSc SINE Alu 1 297 -12 1409 216 46 39 chr5 49158142 49158437 -150471713 + MLT1C LTR MaLR 116 416 -51 355 112 0 33 chr5 49158493 49158553 -150471597 + MLT1C LTR MaLR 308 467 0 23 33 0 0 chr5 49158689 49158719 -150471431 + AT_rich Low_complexity Low_complexity 1 30 0 207 337 50 20 chr5 49158736 49158837 -150471313 - MIR SINE MIR -55 207 104 1678 130 89 43 chr5 49159572 49159653 -150470497 + MER1B DNA MER1_type 1 77 -2635 2057 87 31 107 chr5 49159653 49160045 -150470105 + THE1B LTR MaLR 1 362 -2 1678 130 89 43 chr5 49160045 49160287 -150469863 + MER1B DNA MER1_type 77 339 0 296 339 24 16 chr5 49160881 49161005 -150469145 + MIR SINE MIR 6 130 -132 1346 101 6 0 chr5 49161103 49161282 -150468868 - AluSg/x SINE Alu -4 306 127 301 114 0 0 chr5 49161293 49161337 -150468813 - Alu SINE Alu -259 44 1 816 257 11 0 chr5 49161347 49161530 -150468620 + MIR SINE MIR 78 262 0 21 36 0 0 chr5 49161562 49161590 -150468560 + AT_rich Low_complexity Low_complexity 1 28 0 2078 184 18 55 chr5 49162452 49162892 -150467258 + MSTB LTR MaLR 3 426 0 1105 129 0 0 chr5 49163373 49163544 -150466606 - Tigger1 DNA MER2_type -305 2113 1943 1621 188 3 3 chr5 49163891 49164203 -150465947 - AluJb SINE Alu 0 314 3 1743 225 73 64 chr5 49164215 49164267 -150465883 + L1ME2 LINE L1 4982 5032 -1132 2274 115 0 0 chr5 49164267 49164572 -150465578 + AluSg SINE Alu 1 305 -5 1743 225 73 64 chr5 49164572 49165016 -150465134 + L1ME2 LINE L1 5032 5471 -693 14084 142 25 10 chr5 49165016 49167396 -150462754 - Tigger1 DNA MER2_type 0 2418 2 1743 225 73 64 chr5 49167396 49167467 -150462683 + L1ME2 LINE L1 5471 5540 -624 2190 113 0 0 chr5 49167467 49167768 -150462382 + AluSc SINE Alu 1 301 -8 1743 225 73 64 chr5 49167768 49168406 -150461744 + L1ME2 LINE L1 5540 6155 -9 209 382 53 27 chr5 49168431 49168656 -150461494 - MIR SINE MIR -12 250 20 2438 97 6 0 chr5 49169410 49169721 -150460429 + AluSq SINE Alu 1 313 0 2114 131 0 13 chr5 49169850 49170163 -150459987 - AluSg1 SINE Alu 0 309 1 2061 122 10 0 chr5 49170193 49170496 -150459654 + AluSq SINE Alu 1 306 -7 181 243 75 47 chr5 49171596 49171703 -150458447 - L2 LINE L2 -157 3115 3006 300 302 151 73 chr5 49172123 49172467 -150457683 + L1MDb LINE L1 396 766 -5643 240 244 33 11 chr5 49173146 49173236 -150456914 + MER81 DNA DNA 2 93 -21 33 0 0 0 chr5 49174167 49174200 -150455950 + AT_rich Low_complexity Low_complexity 1 33 0 8598 189 40 25 chr5 49174411 49176057 -150454093 + L1MA9 LINE L1 2856 4545 -1601 2447 127 19 28 chr5 49176057 49176481 -150453669 + L1MA2 LINE L1 5885 6304 0 8598 189 40 25 chr5 49176481 49177019 -150453131 + L1MA9 LINE L1 4545 5073 -1073 288 0 0 0 chr5 49177025 49177057 -150453093 + (A)n Simple_repeat Simple_repeat 1 32 0 4920 163 53 4 chr5 49177059 49178264 -150451886 + L1MA9 LINE L1 5042 6302 -10 774 165 0 0 chr5 49180507 49180640 -150449510 + FLAM_C SINE Alu 1 133 0 203 175 0 0 chr5 49180750 49180790 -150449360 + T-rich Low_complexity Low_complexity 2 41 0 939 364 101 15 chr5 49180840 49181621 -150448529 - L2 LINE L2 -585 2729 1882 248 290 0 0 chr5 49181623 49181692 -150448458 + L3 LINE CR1 1495 1563 -14 416 345 42 12 chr5 49183594 49183762 -150446388 + MIR SINE MIR 4 176 -86 1704 160 34 7 chr5 49184510 49184779 -150445371 + AluJb SINE Alu 1 276 -36 1779 176 79 5 chr5 49184805 49185185 -150444965 - MSTB1 LTR MaLR -24 408 1 24 53 0 0 chr5 49186806 49186844 -150443306 + AT_rich Low_complexity Low_complexity 1 38 0 1451 168 139 9 chr5 49186869 49187185 -150442965 - MSTD LTR MaLR 0 396 40 2402 152 21 21 chr5 49187185 49187607 -150442543 + MSTB LTR MaLR 1 422 -4 1015 185 0 0 chr5 49187611 49187806 -150442344 + MSTB-int LTR MaLR 1 195 -1456 7827 198 10 20 chr5 49187823 49190111 -150440039 + L1PB2 LINE L1 3 1644 -5219 12499 178 17 10 chr5 49190115 49191697 -150438453 + L1PB2 LINE L1 3095 4666 -2201 1756 122 76 62 chr5 49191697 49192066 -150438084 + THE1C LTR MaLR 1 374 -1 12499 178 17 10 chr5 49192066 49192968 -150437182 + L1PB2 LINE L1 4666 5561 -1306 1829 123 32 42 chr5 49192968 49193277 -150436873 + AluSq SINE Alu 1 306 0 12499 178 17 10 chr5 49193277 49194533 -150435617 + L1PB2 LINE L1 5561 6864 -3 6782 174 30 55 chr5 49194551 49196041 -150434109 + MSTB-int LTR MaLR 187 1638 -13 2192 171 29 12 chr5 49196056 49196470 -150433680 + MSTB LTR MaLR 6 426 0 230 200 0 0 chr5 49196470 49196514 -150433636 - MSTD LTR MaLR -352 44 1 2834 16 0 0 chr5 49196553 49196864 -150433286 + AluYb8 SINE Alu 1 311 -7 216 338 62 0 chr5 49198603 49198683 -150431467 + MER91C DNA MER1_type 26 110 -30 1874 217 46 63 chr5 49199666 49200269 -150429881 - MER7C DNA MER2_type -2 600 8 282 323 113 40 chr5 49200542 49200790 -150429360 + L2 LINE L2 3048 3313 0 389 230 44 44 chr5 49201965 49202100 -150428050 - MLT1J LTR MaLR -48 463 329 273 306 70 54 chr5 49202311 49202497 -150427653 - MLT1J LTR MaLR -212 299 111 1835 191 111 40 chr5 49202686 49203229 -150426921 - MLT1G LTR MaLR -7 583 3 206 77 0 0 chr5 49203261 49203287 -150426863 + (TTCTC)n Simple_repeat Simple_repeat 5 30 0 660 124 0 0 chr5 49203287 49203392 -150426758 + (TCCCC)n Simple_repeat Simple_repeat 1 105 0 431 157 88 20 chr5 49203394 49203496 -150426654 - FRAM SINE Alu -13 163 55 1602 84 56 0 chr5 49203566 49203780 -150426370 + L1PA11 LINE L1 5949 6174 0 2296 136 67 122 chr5 49204122 49204459 -150425691 + MER4B LTR ERV1 1 355 -255 324 0 0 0 chr5 49204459 49204495 -150425655 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 1899 88 72 0 chr5 49204495 49204757 -150425393 - AluSc SINE Alu -28 281 1 2296 136 67 122 chr5 49204757 49205035 -150425115 + MER4B LTR ERV1 353 583 -27 369 271 45 38 chr5 49205572 49205705 -150424445 + MIR SINE MIR 57 190 -72 416 262 52 133 chr5 49205940 49206264 -150423886 - L2 LINE L2 -36 3277 2980 858 287 13 4 chr5 49206266 49206496 -150423654 - MIR SINE MIR -29 233 2 195 42 0 0 chr5 49206611 49206635 -150423515 + (TG)n Simple_repeat Simple_repeat 2 25 0 1673 195 0 3 chr5 49206648 49206946 -150423204 - AluJo SINE Alu -5 307 11 2100 95 11 3 chr5 49210261 49210591 -150419559 - AluSq SINE Alu 0 360 29 331 277 21 11 chr5 49213077 49213171 -150416979 - MIR3 SINE MIR -45 163 69 2172 118 7 0 chr5 49213398 49213694 -150416456 - AluSq SINE Alu -13 300 3 1844 129 45 26 chr5 49214278 49214587 -150415563 - MER50 LTR ERV1 -23 711 397 1520 127 12 36 chr5 49214581 49214834 -150415316 - MER50 LTR ERV1 -486 248 2 * 2746 32 0 0 chr5 49216477 49216788 -150413362 + AluYb8 SINE Alu 1 311 -7 213 338 62 0 chr5 49218527 49218607 -150411543 - MER91C DNA MER1_type -25 115 31 2138 218 46 62 chr5 49219588 49220198 -150409952 - MER7C DNA MER2_type -2 600 1 244 327 113 40 chr5 49220464 49220712 -150409438 + L2 LINE L2 3048 3313 0 441 230 44 44 chr5 49221887 49222022 -150408128 - MLT1J LTR MaLR -48 463 329 330 285 75 59 chr5 49222233 49222419 -150407731 - MLT1J LTR MaLR -212 299 111 1835 191 111 40 chr5 49222623 49223166 -150406984 - MLT1G LTR MaLR -7 583 3 515 121 0 11 chr5 49223235 49223326 -150406824 + (TCCCC)n Simple_repeat Simple_repeat 1 90 0 431 157 88 20 chr5 49223328 49223430 -150406720 - FRAM SINE Alu -13 163 55 1617 84 56 0 chr5 49223500 49223714 -150406436 + L1PA11 LINE L1 5949 6174 0 2329 134 63 123 chr5 49224056 49224396 -150405754 + MER4B LTR ERV1 1 360 -250 270 0 0 0 chr5 49224396 49224426 -150405724 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 1899 88 72 0 chr5 49224426 49224688 -150405462 - AluSc SINE Alu -28 281 1 2329 134 63 123 chr5 49224688 49224966 -150405184 + MER4B LTR ERV1 358 583 -27 369 271 45 38 chr5 49225504 49225637 -150404513 + MIR SINE MIR 57 190 -72 402 265 52 133 chr5 49225872 49226196 -150403954 - L2 LINE L2 -36 3277 2980 858 287 13 4 chr5 49226198 49226428 -150403722 - MIR SINE MIR -29 233 2 195 42 0 0 chr5 49226543 49226567 -150403583 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 210 37 0 0 chr5 49226566 49226593 -150403557 + (TA)n Simple_repeat Simple_repeat 2 28 0 1575 192 0 10 chr5 49226593 49226884 -150403266 - AluJo SINE Alu -14 298 11 204 118 29 0 chr5 49230200 49230234 -150399916 + CT-rich Low_complexity Low_complexity 2 36 0 2033 106 11 3 chr5 49230234 49230517 -150399633 - AluSq SINE Alu 0 313 29 406 70 18 0 chr5 49231610 49231667 -150398483 - AluSp/q SINE Alu -15 298 241 246 327 18 0 chr5 49232034 49232143 -150398007 - MIR3 SINE MIR -23 185 74 24 32 0 0 chr5 49232208 49232239 -150397911 + AT_rich Low_complexity Low_complexity 1 31 0 504 0 0 0 chr5 49232603 49232659 -150397491 + (TG)n Simple_repeat Simple_repeat 2 57 0 207 139 0 0 chr5 49234190 49234226 -150395924 + (CA)n Simple_repeat Simple_repeat 2 37 0 216 261 0 0 chr5 49234918 49234987 -150395163 + A-rich Low_complexity Low_complexity 1 69 0 432 0 0 0 chr5 49236088 49236157 -150393993 + (TG)n Simple_repeat Simple_repeat 1 117 0 432 0 0 0 chr5 49236157 49236205 -150393945 + (TG)n Simple_repeat Simple_repeat 2 49 0 267 295 0 13 chr5 49237270 49237348 -150392802 + CT-rich Low_complexity Low_complexity 2 78 0 226 71 24 24 chr5 49238251 49238293 -150391857 + (CA)n Simple_repeat Simple_repeat 2 43 0 249 152 0 0 chr5 49241665 49241711 -150388439 + LTR66 LTR ERVL 394 439 -171 2233 95 0 3 chr5 49241821 49242153 -150387997 + AluSq SINE Alu 1 331 0 1833 129 32 0 chr5 49242374 49242538 -150387612 - AluSq SINE Alu -25 288 110 237 65 0 0 chr5 49242538 49242569 -150387581 + (TTTAG)n Simple_repeat Simple_repeat 5 35 0 1833 129 32 0 chr5 49242569 49242683 -150387467 - AluSq SINE Alu -203 110 1 361 188 38 0 chr5 49243126 49243206 -150386944 + MIR SINE MIR 153 235 -27 1677 189 22 31 chr5 49244479 49244834 -150385316 - MLT1A1 LTR MaLR 0 365 14 219 139 0 0 chr5 49244839 49244875 -150385275 + (TG)n Simple_repeat Simple_repeat 1 36 0 301 253 0 55 chr5 49245130 49245221 -150384929 - HAL1 LINE L1 -1465 1042 957 2445 198 79 13 chr5 49245726 49246247 -150383903 + MER119 DNA MER1_type 29 583 0 369 43 0 0 chr5 49246690 49246737 -150383413 + (CA)n Simple_repeat Simple_repeat 2 48 0 432 286 40 16 chr5 49248593 49248719 -150381431 - MIR SINE MIR -64 144 16 542 231 39 8 chr5 49250834 49250964 -150379186 - MIR SINE MIR -20 242 109 3336 111 126 0 chr5 49251207 49251675 -150378475 + MER1A DNA MER1_type 1 527 0 1282 148 74 40 chr5 49251830 49252199 -150377951 + MLT1C LTR MaLR 21 390 0 285 430 49 0 chr5 49252991 49253133 -150377017 - L2 LINE L2 -37 3235 3087 275 322 58 16 chr5 49253515 49253636 -150376514 - L2 LINE L2 -10 3303 3178 21 0 0 0 chr5 49255941 49255962 -150374188 + AT_rich Low_complexity Low_complexity 1 21 0 1892 200 104 40 chr5 49256191 49256720 -150373430 + MLT1F1 LTR MaLR 1 563 -4 1977 148 3 0 chr5 49256902 49257213 -150372937 + AluSx SINE Alu 1 312 0 273 250 28 14 chr5 49257882 49257954 -150372196 + CT-rich Low_complexity Low_complexity 3 75 0 2331 183 83 53 chr5 49259201 49259801 -150370349 + MLT1E3 LTR MaLR 6 623 -1 741 125 44 0 chr5 49261623 49261759 -150368391 - L1MA3 LINE L1 0 6305 6164 249 119 0 0 chr5 49262344 49262386 -150367764 + (CA)n Simple_repeat Simple_repeat 1 42 0 398 261 122 6 chr5 49263012 49263192 -150366958 - LTR33A LTR ERVL 0 523 323 1801 176 34 3 chr5 49263324 49263647 -150366503 + MSTB LTR MaLR 1 333 -93 191 329 82 43 chr5 49263773 49263980 -150366170 + L2 LINE L2 1495 1709 -1605 424 307 235 0 chr5 49264324 49264477 -150365673 + MER5A DNA MER1_type 1 189 0 181 356 75 21 chr5 49265346 49265585 -150364565 + L2 LINE L2 1942 2193 -1121 1038 175 0 0 chr5 49266101 49266267 -150363883 - FRAM SINE Alu -13 163 1 422 363 131 29 chr5 49266338 49266652 -150363498 + L2 LINE L2 2927 3272 0 258 111 0 0 chr5 49267390 49267426 -150362724 - U2 snRNA snRNA -152 36 1 357 241 0 12 chr5 49268121 49268204 -150361946 - MIR SINE MIR -108 154 73 516 291 109 9 chr5 49268267 49268487 -150361663 + MIR SINE MIR 20 261 -1 267 31 0 0 chr5 49268566 49268598 -150361552 + (TA)n Simple_repeat Simple_repeat 2 33 0 285 118 0 0 chr5 49269015 49269066 -150361084 + (TG)n Simple_repeat Simple_repeat 1 51 0 1417 196 12 4 chr5 49269068 49269323 -150360827 - AluJb SINE Alu -23 289 33 29 60 0 0 chr5 49269326 49269376 -150360774 + AT_rich Low_complexity Low_complexity 1 50 0 210 118 0 0 chr5 49271699 49271733 -150358417 + (TC)n Simple_repeat Simple_repeat 2 35 0 24 0 0 0 chr5 49272540 49272564 -150357586 + AT_rich Low_complexity Low_complexity 1 24 0 608 276 51 19 chr5 49273172 49273198 -150356952 + L1PA16 LINE L1 5745 5769 -397 2084 112 3 14 chr5 49273198 49273518 -150356632 - AluSx SINE Alu 0 312 1 493 155 10 10 chr5 49273523 49273626 -150356524 - L1MA7 LINE L1 -5 6286 6184 2189 126 13 39 chr5 49273626 49274008 -150356142 + L1MA7 LINE L1 5779 6150 -141 386 246 40 146 chr5 49274444 49274643 -150355507 - MER5B DNA MER1_type 0 178 1 395 269 181 19 chr5 49274653 49274813 -150355337 + MER5A DNA MER1_type 4 189 0 1362 164 35 12 chr5 49275492 49275815 -150354335 + MER33 DNA MER1_type 1 318 -6 297 157 39 0 chr5 49276185 49276236 -150353914 - L2 LINE L2 -11 3302 3250 360 200 105 140 chr5 49277157 49277357 -150352793 - MER112 DNA MER1_type -59 201 9 1101 109 31 57 chr5 49277477 49277706 -150352444 - L1MA2 LINE L1 0 6304 6082 2082 108 10 3 chr5 49277998 49278304 -150351846 + AluSg SINE Alu 1 308 -2 1408 183 10 35 chr5 49281152 49281442 -150348708 - AluJb SINE Alu -4 308 26 841 195 23 17 chr5 49282087 49282261 -150347889 - MER5A DNA MER1_type -6 183 9 235 259 0 0 chr5 49283515 49283569 -150346581 + (TA)n Simple_repeat Simple_repeat 2 55 0 22 35 0 0 chr5 49284141 49284170 -150345980 + AT_rich Low_complexity Low_complexity 1 29 0 1269 124 101 0 chr5 49284412 49284621 -150345529 - MER30 DNA MER1_type 0 230 1 330 319 0 0 chr5 49284781 49284872 -150345278 - L1MC4 LINE L1 -1339 6703 6613 264 224 0 0 chr5 49284874 49284941 -150345209 + (TA)n Simple_repeat Simple_repeat 2 68 0 398 116 21 21 chr5 49284977 49285072 -150345078 + (TA)n Simple_repeat Simple_repeat 2 96 0 1385 82 13 69 chr5 49285743 49285976 -150344174 + L1MA2 LINE L1 6085 6304 0 397 297 39 14 chr5 49286502 49286723 -150343427 + MLT1K LTR MaLR 3 298 -290 336 290 28 15 chr5 49288130 49288291 -150341859 + MER5A DNA MER1_type 7 170 -8 212 234 0 0 chr5 49288457 49288504 -150341646 + MIR SINE MIR 97 143 -119 1570 228 234 3 chr5 49289896 49290545 -150339605 + L2 LINE L2 1574 2372 -942 2028 165 61 61 chr5 49290574 49291052 -150339098 + LTR54 LTR ERV1 1 478 -32 1231 286 98 9 chr5 49291113 49291540 -150338610 + L2 LINE L2 2409 2873 -441 250 339 142 0 chr5 49293416 49293543 -150336607 - MIR SINE MIR -1 261 117 523 310 83 79 chr5 49294180 49294713 -150335437 + L1MEd LINE L1 535 1069 -5050 26 30 0 0 chr5 49294914 49294947 -150335203 + AT_rich Low_complexity Low_complexity 1 33 0 714 239 0 2 chr5 49295218 49295398 -150334752 - L1P LINE L1 -989 5157 4980 3085 146 18 62 chr5 49295398 49296013 -150334137 + L1PB4 LINE L1 5567 6154 -2 714 239 0 2 chr5 49296013 49296031 -150334119 - L1P LINE L1 -1166 4980 4963 240 250 0 16 chr5 49296356 49296420 -150333730 + (TA)n Simple_repeat Simple_repeat 1 63 0 30 77 0 0 chr5 49296484 49296549 -150333601 + AT_rich Low_complexity Low_complexity 1 65 0 742 171 23 0 chr5 49296730 49296859 -150333291 + MER20 DNA MER1_type 87 218 -1 273 237 176 38 chr5 49298544 49298675 -150331475 - L1MC/D LINE L1 -1984 5824 5676 32 0 0 0 chr5 49298945 49298977 -150331173 + AT_rich Low_complexity Low_complexity 1 32 0 180 77 0 0 chr5 49298977 49299003 -150331147 + (CATATA)n Simple_repeat Simple_repeat 2 27 0 201 245 29 29 chr5 49299177 49299244 -150330906 + (TATATG)n Simple_repeat Simple_repeat 1 70 -32 1738 156 126 3 chr5 49299244 49299570 -150330580 - MER47A DNA MER2_type 0 366 1 201 245 29 29 chr5 49299570 49299604 -150330546 + (TATATG)n Simple_repeat Simple_repeat 69 102 0 391 131 83 24 chr5 49299778 49299862 -150330288 + MER5A DNA MER1_type 94 182 -7 391 314 50 6 chr5 49299898 49300057 -150330093 - MER5B DNA MER1_type 0 178 13 406 289 137 15 chr5 49300170 49300367 -150329783 + MIR SINE MIR 32 252 -10 237 191 64 91 chr5 49302351 49302461 -150327689 + L1MC4 LINE L1 7864 7970 -72 29 0 0 0 chr5 49303969 49303998 -150326152 + AT_rich Low_complexity Low_complexity 1 29 0 1407 98 24 0 chr5 49303998 49304203 -150325947 - L1PA10 LINE L1 0 6168 5959 369 335 108 21 chr5 49304742 49304936 -150325214 - L2 LINE L2 -4 3268 3058 879 90 14 14 chr5 49305042 49305187 -150324963 - L1PA8A LINE L1 -102 6029 5885 410 281 0 0 chr5 49305301 49305401 -150324749 - MLT1I LTR MaLR -231 178 79 290 298 35 7 chr5 49305514 49305655 -150324495 - HAL1 LINE L1 -860 1647 1503 847 252 24 0 chr5 49305814 49306020 -150324130 - MER58A DNA MER1_type -13 211 1 268 253 35 53 chr5 49306038 49306208 -150323942 - L1MEd LINE L1 -4910 1209 1043 497 220 28 0 chr5 49306270 49306379 -150323771 - MER81 DNA DNA -2 112 1 301 207 0 0 chr5 49306967 49307025 -150323125 - MER20 DNA MER1_type -61 158 101 560 200 12 97 chr5 49307044 49307209 -150322941 - MER20 DNA MER1_type -68 151 1 360 111 0 56 chr5 49307748 49307820 -150322330 + L1 LINE L1 3990 4057 -2089 1602 126 3 21 chr5 49307820 49308104 -150322046 + L1MA5A LINE L1 6018 6297 0 3712 235 148 11 chr5 49308119 49310001 -150320149 + L1ME1 LINE L1 2171 4298 -1917 906 183 88 88 chr5 49310001 49310329 -150319821 + L1ME1 LINE L1 5580 5907 -328 443 98 24 49 chr5 49310499 49310581 -150319569 + L1PA10 LINE L1 6085 6164 -4 1196 243 58 25 chr5 49310754 49311154 -150318996 - MLT1C LTR MaLR 0 467 55 21 0 0 0 chr5 49311713 49311734 -150318416 + AT_rich Low_complexity Low_complexity 1 21 0 4209 138 21 11 chr5 49311766 49312040 -150318110 - L1MB3 LINE L1 -2 6181 5911 2198 116 0 3 chr5 49312040 49312333 -150317817 - AluSx SINE Alu -20 292 1 4209 138 21 11 chr5 49312333 49312803 -150317347 - L1MB3 LINE L1 -272 5911 5429 274 0 73 0 chr5 49314135 49314176 -150315974 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 441 210 10 0 chr5 49314388 49314488 -150315662 - L1MA8 LINE L1 -201 6090 5990 256 279 95 58 chr5 49315399 49315589 -150314561 + L2 LINE L2 3117 3313 0 464 313 145 32 chr5 49316175 49316610 -150313540 + L1ME4a LINE L1 5579 6062 -59 1384 192 48 34 chr5 49316613 49316905 -150313245 - AluJo SINE Alu -3 309 14 2259 98 7 0 chr5 49316954 49317251 -150312899 - AluSq SINE Alu -14 299 1 2354 93 0 6 chr5 49317424 49317735 -150312415 - AluY SINE Alu -2 309 1 2364 57 40 3 chr5 49319237 49319537 -150310613 + AluY SINE Alu 1 311 0 624 239 0 0 chr5 49319998 49320115 -150310035 - FLAM_A SINE Alu -16 117 1 2244 87 7 10 chr5 49321216 49321514 -150308636 + AluSx SINE Alu 1 297 -15 235 71 48 0 chr5 49321778 49321820 -150308330 + (TG)n Simple_repeat Simple_repeat 1 44 0 2968 250 72 41 chr5 49422451 49423112 -150207038 + L1ME3A LINE L1 1005 1644 -4571 1602 139 101 35 chr5 49423112 49423428 -150206722 + MER44D DNA MER2_type 3 609 0 2968 250 72 41 chr5 49423428 49424527 -150205623 + L1ME3A LINE L1 1644 2788 -3427 479 277 77 24 chr5 49425476 49425749 -150204401 + L1ME3A LINE L1 5518 5808 -445 30 27 0 0 chr5 49425835 49425872 -150204278 + AT_rich Low_complexity Low_complexity 1 37 0 2044 104 11 0 chr5 49425927 49426239 -150203911 + AluSp SINE Alu 1 315 0 575 284 75 55 chr5 49426246 49426912 -150203238 + L1MB3 LINE L1 1041 1876 -4659 344 248 130 29 chr5 49427225 49427463 -150202687 + L1MB3 LINE L1 2526 2787 -3595 1366 268 109 19 chr5 49427593 49428433 -150201717 + L1MB3 LINE L1 5223 6164 -255 645 203 40 0 chr5 49428346 49428494 -150201656 + L1ME3A LINE L1 6077 6230 -176 * 273 241 0 17 chr5 49428915 49428973 -150201177 + L2 LINE L2 3201 3257 -15 25 0 0 0 chr5 49429770 49429795 -150200355 + AT_rich Low_complexity Low_complexity 1 25 0 320 302 86 0 chr5 49430360 49430476 -150199674 + L2 LINE L2 3170 3295 -18 948 201 0 0 chr5 49431209 49431383 -150198767 - FRAM SINE Alu -3 173 1 230 291 77 41 chr5 49432120 49432208 -150197942 - MIR SINE MIR -66 142 54 517 285 75 20 chr5 49433631 49433831 -150196319 - MIR SINE MIR -5 257 47 1834 162 41 33 chr5 49434123 49434487 -150195663 - THE1C LTR MaLR 0 375 9 893 186 107 11 chr5 49435038 49435215 -150194935 - MER20 DNA MER1_type -2 217 24 1290 266 53 39 chr5 49435358 49436002 -150194148 + L1MC4 LINE L1 6995 7647 -395 482 154 0 89 chr5 49436137 49436260 -150193890 + L1PA11 LINE L1 6063 6174 0 247 125 0 54 chr5 49436277 49436333 -150193817 + (TAAAA)n Simple_repeat Simple_repeat 2 54 0 366 339 75 23 chr5 49438214 49438388 -150191762 - MIR3 SINE MIR -17 191 9 1917 192 30 5 chr5 49438720 49439147 -150191003 - L1MB4 LINE L1 -1 6179 5742 658 243 28 0 chr5 49439403 49439547 -150190603 + FAM SINE Alu 21 168 -17 199 230 81 27 chr5 49440487 49440561 -150189589 - L3 LINE CR1 -4 1573 1496 182 275 50 25 chr5 49441812 49441892 -150188258 + MIR SINE MIR 105 186 -76 * 220 294 29 40 chr5 49441861 49441977 -150188173 + MIR SINE MIR 75 196 -12 2189 306 29 11 chr5 49442016 49442104 -150188046 + L1MEc LINE L1 46 131 -6265 207 0 0 0 chr5 49442104 49442127 -150188023 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2189 306 29 11 chr5 49442127 49442840 -150187310 + L1MEc LINE L1 131 861 -5535 22 35 0 0 chr5 49443389 49443418 -150186732 + AT_rich Low_complexity Low_complexity 1 29 0 658 240 110 49 chr5 49445126 49445544 -150184606 + L1ME4a LINE L1 5672 6121 0 246 309 87 32 chr5 49445996 49446122 -150184028 - L2 LINE L2 -1 3312 3180 327 354 0 16 chr5 49446928 49447055 -150183095 + CT-rich Low_complexity Low_complexity 2 126 0 237 246 0 0 chr5 49447782 49447847 -150182303 + (TA)n Simple_repeat Simple_repeat 2 66 0 2241 119 14 8 chr5 49447851 49448204 -150181946 + THE1A LTR MaLR 1 355 0 22 0 0 0 chr5 49448244 49448266 -150181884 + AT_rich Low_complexity Low_complexity 1 22 0 843 213 42 28 chr5 49448498 49448714 -150181436 - MER20 DNA MER1_type 0 219 1 842 182 0 6 chr5 49449197 49449362 -150180788 + L1PA15 LINE L1 6002 6165 0 24 61 0 0 chr5 49451107 49451140 -150179010 + AT_rich Low_complexity Low_complexity 1 33 0 289 286 124 22 chr5 49451610 49451819 -150178331 - MIR SINE MIR -39 223 5 3293 75 0 2 chr5 49454269 49454710 -150175440 - L1PA7 LINE L1 -5 6149 5710 25 31 0 0 chr5 49454716 49454748 -150175402 + AT_rich Low_complexity Low_complexity 1 32 0 467 309 22 14 chr5 49455106 49455245 -150174905 - MIR3 SINE MIR -37 171 32 1998 146 7 3 chr5 49455822 49456131 -150174019 + AluJb SINE Alu 1 310 -2 1511 197 3 14 chr5 49456875 49457169 -150172981 - AluJo SINE Alu -21 291 1 972 355 81 43 chr5 49457170 49457962 -150172188 + L3 LINE CR1 405 1265 -312 5508 49 0 0 chr5 49457962 49458640 -150171510 + L1PA7 LINE L1 5475 6152 -2 972 355 81 43 chr5 49458640 49458888 -150171262 + L3 LINE CR1 1265 1502 -75 243 61 0 0 chr5 49459748 49459781 -150170369 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 1783 40 5 5 chr5 49459947 49460171 -150169979 - L1PA7 LINE L1 -3 6151 5928 340 101 0 101 chr5 49461246 49461325 -150168825 - L1MA8 LINE L1 -3 6288 6218 1011 126 62 10 chr5 49461468 49461659 -150168491 - L1MA7 LINE L1 -292 6008 5812 326 263 139 15 chr5 49461716 49461853 -150168297 - MARNA DNA Mariner -344 242 89 21 0 0 0 chr5 49462331 49462352 -150167798 + AT_rich Low_complexity Low_complexity 1 21 0 234 242 150 39 chr5 49462831 49462984 -150167166 - L1ME4a LINE L1 -74 6047 5878 300 312 73 18 chr5 49463174 49463283 -150166867 + MIR SINE MIR 21 135 -127 180 0 0 0 chr5 49463987 49464007 -150166143 + (CA)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr5 49465284 49465307 -150164843 + AT_rich Low_complexity Low_complexity 1 23 0 522 205 200 5 chr5 49465483 49465673 -150164477 + MER69 DNA AcHobo 2300 2526 0 24 0 0 0 chr5 49467332 49467356 -150162794 + AT_rich Low_complexity Low_complexity 1 24 0 338 201 49 21 chr5 49467515 49467659 -150162491 + (TA)n Simple_repeat Simple_repeat 1 148 0 24 32 0 0 chr5 49468170 49468201 -150161949 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr5 49468368 49468404 -150161746 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 49470058 49470080 -150160070 + AT_rich Low_complexity Low_complexity 1 22 0 212 158 0 0 chr5 49470451 49470489 -150159661 + (CA)n Simple_repeat Simple_repeat 2 39 0 282 115 0 0 chr5 49471308 49471360 -150158790 + (TTCA)n Simple_repeat Simple_repeat 2 53 0 236 299 52 52 chr5 49471364 49471498 -150158652 - L2 LINE L2 -4 3309 3176 38 0 0 0 chr5 49471672 49471710 -150158440 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 49471877 49471907 -150158243 + AT_rich Low_complexity Low_complexity 1 30 0 32 75 0 0 chr5 49473091 49473158 -150156992 + AT_rich Low_complexity Low_complexity 1 67 0 2132 115 3 0 chr5 49474520 49474815 -150155335 - AluSg SINE Alu -14 296 1 310 237 52 31 chr5 49474891 49474988 -150155162 - L1MC4 LINE L1 -1330 6712 6614 182 327 0 0 chr5 49476560 49476615 -150153535 - L2 LINE L2 -32 3240 3186 2089 138 3 0 chr5 49476814 49477112 -150153038 + AluSx SINE Alu 1 299 -13 246 176 9 2 chr5 49477171 49477404 -150152746 + AluJb SINE Alu 2 292 -10 211 215 77 31 chr5 49478276 49478341 -150151809 + MIR3 SINE MIR 105 172 -36 32 43 0 0 chr5 49478404 49478450 -150151700 + AT_rich Low_complexity Low_complexity 1 46 0 212 273 71 20 chr5 49478459 49478558 -150151592 - MIR SINE MIR -75 187 84 2178 89 4 0 chr5 49478636 49478941 -150151209 - AluSp SINE Alu 0 307 2 248 167 0 19 chr5 49479516 49479570 -150150580 + (TA)n Simple_repeat Simple_repeat 1 53 0 186 143 0 0 chr5 49479750 49479785 -150150365 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 24 0 0 0 chr5 49480110 49480134 -150150016 + AT_rich Low_complexity Low_complexity 1 24 0 25 51 0 0 chr5 49480577 49480616 -150149534 + AT_rich Low_complexity Low_complexity 1 39 0 811 347 27 15 chr5 49482336 49482673 -150147477 - LTR33 LTR ERVL -33 488 148 486 387 55 31 chr5 49483742 49484127 -150146023 - L2 LINE L2 -496 2818 2425 502 217 25 56 chr5 49484158 49484319 -150145831 + AluJb SINE Alu 137 292 -20 32 43 0 0 chr5 49485324 49485370 -150144780 + AT_rich Low_complexity Low_complexity 1 46 0 42480 35 22 1 chr5 49485978 49492002 -150138148 + L1PA2 LINE L1 4 6155 0 23 0 0 0 chr5 49492168 49492191 -150137959 + AT_rich Low_complexity Low_complexity 1 23 0 233 326 65 29 chr5 49493974 49494112 -150136038 + MER5B DNA MER1_type 36 178 0 211 250 143 12 chr5 49494159 49494243 -150135907 - MIR SINE MIR -56 206 112 2479 47 0 3 chr5 49494670 49494967 -150135183 + AluY SINE Alu 1 296 -15 21 36 0 0 chr5 49495136 49495164 -150134986 + AT_rich Low_complexity Low_complexity 1 28 0 2774 191 46 15 chr5 49495933 49496520 -150133630 - L1MA10 LINE L1 -7 6327 5723 3252 82 27 0 chr5 49496520 49496961 -150133189 + MLT2A2 LTR ERVL 1 453 0 399 196 157 0 chr5 49497351 49497453 -150132697 - MIR SINE MIR 0 262 145 1132 164 34 11 chr5 49497453 49497825 -150132325 - MER21A LTR ERV1 -363 500 100 2390 113 40 9 chr5 49497826 49498172 -150131978 + THE1B LTR MaLR 8 364 0 4921 189 54 19 chr5 49498172 49498496 -150131654 - L1MA10 LINE L1 -441 5727 5416 405 0 0 0 chr5 49498496 49498541 -150131609 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 4921 189 54 19 chr5 49498541 49499221 -150130929 - L1MA10 LINE L1 -752 5416 4666 2745 16 0 0 chr5 49499221 49499526 -150130624 + AluYa5 SINE Alu 1 305 -6 4921 189 54 19 chr5 49499526 49500048 -150130102 - L1MA10 LINE L1 -1502 4666 4164 374 278 8 48 chr5 49500289 49500415 -150129735 + L2 LINE L2 3193 3313 0 1905 130 29 46 chr5 49500952 49501297 -150128853 + MER44D DNA MER2_type 1 609 0 231 276 13 0 chr5 49503521 49503597 -150126553 + (TAGA)n Simple_repeat Simple_repeat 4 80 0 30 45 0 0 chr5 49503780 49503824 -150126326 + AT_rich Low_complexity Low_complexity 1 44 0 600 281 27 16 chr5 49505651 49505836 -150124314 - MER5A DNA MER1_type -2 187 1 1954 126 60 20 chr5 49506908 49507256 -150122894 - THE1C LTR MaLR 0 375 14 356 250 86 8 chr5 49509142 49509270 -150120880 + L2 LINE L2 3171 3308 -5 741 299 6 20 chr5 49509885 49510197 -150119953 + L1ME2 LINE L1 5667 5971 -150 198 0 0 0 chr5 49510423 49510445 -150119705 + (CAA)n Simple_repeat Simple_repeat 2 23 0 226 224 0 17 chr5 49511117 49511175 -150118975 + GA-rich Low_complexity Low_complexity 3 59 0 216 0 0 0 chr5 49511539 49511563 -150118587 + (A)n Simple_repeat Simple_repeat 1 24 0 1814 146 40 0 chr5 49511619 49511916 -150118234 - AluSx SINE Alu 0 308 1 36 0 0 0 chr5 49511919 49511955 -150118195 + AT_rich Low_complexity Low_complexity 1 36 0 223 256 103 45 chr5 49512038 49512116 -150118034 + MIR SINE MIR 71 143 -119 1713 214 61 13 chr5 49512116 49512494 -150117656 - MSTD LTR MaLR 0 396 1 223 256 103 45 chr5 49512494 49512569 -150117581 + MIR SINE MIR 143 233 -29 24 0 0 0 chr5 49513584 49513608 -150116542 + AT_rich Low_complexity Low_complexity 1 24 0 277 315 91 35 chr5 49514944 49515176 -150114974 + L2 LINE L2 1825 2069 -1245 733 243 149 4 chr5 49515490 49515745 -150114405 + L2 LINE L2 3021 3312 -1 275 280 51 69 chr5 49515855 49516030 -150114120 - MLT1J LTR MaLR -11 500 329 363 284 15 37 chr5 49516187 49516321 -150113829 - MLT1J1 LTR MaLR -308 138 8 1738 200 82 22 chr5 49516947 49517046 -150113104 + Charlie1b DNA MER1_type 1 93 -2668 1862 141 31 0 chr5 49517046 49517336 -150112814 + AluSx SINE Alu 1 299 -13 1738 200 82 22 chr5 49517336 49517687 -150112463 + Charlie1b DNA MER1_type 93 478 -45 380 167 0 36 chr5 49517713 49517797 -150112353 - LTR30 LTR ERV1 -98 624 544 266 180 0 0 chr5 49517797 49517847 -150112303 - LTR12 LTR ERV1 -437 277 228 239 36 0 0 chr5 49517850 49517878 -150112272 + Charlie1b DNA MER1_type 463 490 -33 279 0 0 0 chr5 49520574 49520605 -150109545 + (CA)n Simple_repeat Simple_repeat 1 31 0 215 125 25 0 chr5 49522208 49522248 -150107902 + (TATG)n Simple_repeat Simple_repeat 1 41 0 180 0 0 0 chr5 49523157 49523177 -150106973 + (T)n Simple_repeat Simple_repeat 1 20 0 207 0 0 0 chr5 49524574 49524597 -150105553 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 22 35 0 0 chr5 49526272 49526301 -150103849 + AT_rich Low_complexity Low_complexity 1 29 0 190 231 19 19 chr5 49528979 49529031 -150101119 + MIR3 SINE MIR 157 208 0 498 108 0 0 chr5 49530106 49530180 -150099970 + (A)n Simple_repeat Simple_repeat 1 74 0 350 184 0 23 chr5 49531178 49531265 -150098885 + (CTCG)n Simple_repeat Simple_repeat 1 85 0 24 0 0 0 chr5 49532522 49532546 -150097604 + AT_rich Low_complexity Low_complexity 1 24 0 298 241 11 46 chr5 49533467 49533554 -150096596 + CT-rich Low_complexity Low_complexity 2 85 0 23 0 0 0 chr5 49534001 49534024 -150096126 + AT_rich Low_complexity Low_complexity 1 23 0 333 0 0 0 chr5 49534373 49534410 -150095740 + (CA)n Simple_repeat Simple_repeat 2 38 0 267 103 0 0 chr5 49536344 49536383 -150093767 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 205 179 0 26 chr5 49537634 49537673 -150092477 + CT-rich Low_complexity Low_complexity 1 38 0 189 0 0 0 chr5 49539105 49539126 -150091024 + (T)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr5 49544822 49544850 -150085300 + AT_rich Low_complexity Low_complexity 1 28 0 927 208 47 114 chr5 49547626 49548029 -150082121 + L1ME1 LINE L1 5786 6161 -5 317 286 118 89 chr5 49549440 49549789 -150080361 + MLT1J LTR MaLR 44 402 -109 2449 213 67 65 chr5 49549792 49550439 -150079711 - MLT1E1 LTR MaLR -6 648 1 2142 108 7 3 chr5 49550667 49550963 -150079187 + AluSx SINE Alu 1 297 -15 1789 148 0 39 chr5 49550968 49551273 -150078877 + AluJo SINE Alu 1 293 -19 2907 213 18 15 chr5 49551525 49552132 -150078018 - MER90 LTR ERV1 0 614 6 25 31 0 0 chr5 49554316 49554348 -150075802 + AT_rich Low_complexity Low_complexity 1 32 0 1730 174 0 21 chr5 49555552 49555840 -150074310 - AluJo SINE Alu -30 282 1 22 0 0 0 chr5 49555961 49555983 -150074167 + AT_rich Low_complexity Low_complexity 1 22 0 2024 134 0 0 chr5 49556383 49556695 -150073455 - AluJb SINE Alu 0 312 1 388 282 32 27 chr5 49556879 49557067 -150073083 - LTR33 LTR ERVL -6 515 327 372 259 259 0 chr5 49557140 49557275 -150072875 - LTR33 LTR ERVL -323 198 29 1770 225 123 7 chr5 49557297 49557417 -150072733 - MLT1D LTR MaLR -1 504 399 2181 126 7 0 chr5 49557417 49557727 -150072423 + AluSx SINE Alu 1 312 0 1770 225 123 7 chr5 49557727 49558054 -150072096 - MLT1D LTR MaLR -106 399 5 186 43 0 0 chr5 49558459 49558482 -150071668 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1514 180 17 42 chr5 49558484 49558773 -150071377 - AluJo SINE Alu -30 282 1 652 299 82 50 chr5 49558864 49559202 -150070948 + LTR33 LTR ERVL 11 370 -151 2064 116 35 0 chr5 49559202 49559487 -150070663 - AluSq SINE Alu -18 295 1 652 299 82 50 chr5 49559487 49559623 -150070527 + LTR33 LTR ERVL 370 500 -21 1636 181 8 46 chr5 49561089 49561460 -150068690 + L1MA3 LINE L1 5948 6304 -1 1035 252 108 44 chr5 49562524 49562933 -150067217 - LTR16A LTR ERVL 0 450 16 1205 361 41 23 chr5 49563069 49564281 -150065869 - HERVL LTR ERVL -314 5340 4102 701 279 69 40 chr5 49564339 49564452 -150065698 - LTR16A LTR ERVL -72 378 270 849 79 79 0 chr5 49564452 49564579 -150065571 - MER85 DNA T2_type -2 137 1 701 279 69 40 chr5 49564579 49564712 -150065438 - LTR16A LTR ERVL -180 270 125 42889 49 1 1 chr5 49565964 49572119 -150058031 - L1PA4 LINE L1 -2 6153 3 312 88 175 18 chr5 49574344 49574401 -150055749 - MSTC LTR MaLR 0 428 363 1316 100 0 0 chr5 49574403 49574573 -150055577 + AluSc SINE Alu 135 304 -5 1040 303 27 11 chr5 49574978 49575345 -150054805 + LTR16B LTR ERVL 39 411 -53 943 245 72 32 chr5 49575419 49575791 -150054359 - MLT1G3 LTR MaLR -177 353 1 28 29 0 0 chr5 49577866 49577901 -150052249 + AT_rich Low_complexity Low_complexity 1 35 0 398 274 196 0 chr5 49581616 49581784 -150048366 + MIR SINE MIR 57 257 -5 1867 171 0 3 chr5 49581981 49582279 -150047871 + AluJb SINE Alu 1 297 -15 290 313 82 8 chr5 49582909 49583043 -150047107 + MIR SINE MIR 112 255 -7 365 314 61 76 chr5 49583125 49583402 -150046748 - L2 LINE L2 -56 3257 2985 36480 30 1 0 chr5 49584803 49590041 -150040109 + L1PA2 LINE L1 952 6191 0 23 0 0 0 chr5 49590228 49590251 -150039899 + AT_rich Low_complexity Low_complexity 1 23 0 280 337 101 28 chr5 49590259 49590437 -150039713 + MIR SINE MIR 6 196 -66 1206 336 44 7 chr5 49591152 49591586 -150038564 - LTR16A LTR ERVL 0 450 1 191 311 79 45 chr5 49593419 49593596 -150036554 - MIR SINE MIR -46 216 34 359 336 66 12 chr5 49594344 49594585 -150035565 + L3b LINE CR1 1125 1378 -205 1078 192 13 18 chr5 49594666 49594890 -150035260 + MLT1B LTR MaLR 1 223 -167 867 225 111 16 chr5 49594930 49595174 -150034976 + MLT1B LTR MaLR 201 467 0 1402 129 5 18 chr5 49595876 49596093 -150034057 - AluSg/x SINE Alu -28 284 71 21 0 0 0 chr5 49596594 49596615 -150033535 + AT_rich Low_complexity Low_complexity 1 21 0 332 349 67 20 chr5 49596632 49596827 -150033323 - MIR SINE MIR -50 212 9 228 135 0 0 chr5 49597319 49597356 -150032794 - MIR3 SINE MIR -13 195 159 858 350 161 25 chr5 49597371 49598215 -150031935 - L3 LINE CR1 -136 1441 483 364 174 29 0 chr5 49598332 49598401 -150031749 + MLT1J LTR MaLR 99 169 -342 492 204 10 0 chr5 49598701 49598804 -150031346 - U13 snRNA snRNA 0 104 1 8517 164 116 58 chr5 49600626 49600971 -150029179 + L1MC1 LINE L1 20 343 -6083 267 31 0 0 chr5 49600971 49601003 -150029147 + (GA)n Simple_repeat Simple_repeat 1 32 0 8517 164 116 58 chr5 49601003 49601616 -150028534 + L1MC1 LINE L1 343 919 -5507 353 0 0 0 chr5 49601616 49601659 -150028491 - L1PA3 LINE L1 -4 6151 6109 8517 164 116 58 chr5 49601659 49602086 -150028064 + L1MC1 LINE L1 919 1320 -5106 249 83 0 0 chr5 49602086 49602122 -150028028 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 8517 164 116 58 chr5 49602122 49602908 -150027242 + L1MC1 LINE L1 1320 2320 -4106 1211 199 0 4 chr5 49602908 49603134 -150027016 + AluJo SINE Alu 87 311 -1 10755 223 40 11 chr5 49603137 49603645 -150026505 + L1MC1 LINE L1 2323 2815 -3798 1756 106 0 12 chr5 49603645 49603927 -150026223 + AluY SINE Alu 41 319 0 10755 223 40 11 chr5 49603927 49607144 -150023006 + L1MC1 LINE L1 2815 6166 -447 191 212 15 76 chr5 49607172 49607238 -150022912 + L2 LINE L2 3250 3311 -2 2523 43 10 0 chr5 49607529 49607833 -150022317 - AluY SINE Alu -4 307 1 271 326 61 10 chr5 49608056 49608154 -150021996 - L2 LINE L2 -37 3235 3133 1796 154 9 39 chr5 49608375 49608766 -150021384 + Tigger3(Golem) DNA MER2_type 1 3029 0 836 212 309 42 chr5 49608837 49609247 -150020903 + MLT1G1 LTR MaLR 47 593 -2 1318 161 0 128 chr5 49609561 49609866 -150020284 + AluJo SINE Alu 1 266 -46 43994 41 1 1 chr5 49610145 49616296 -150013854 - L1PA3 LINE L1 -4 6151 1 2589 31 0 0 chr5 49616519 49616810 -150013340 + AluYa5 SINE Alu 1 291 -20 253 250 132 69 chr5 49616988 49617132 -150013018 - MIR SINE MIR 0 262 110 2164 104 30 0 chr5 49617164 49617461 -150012689 - AluSq SINE Alu -7 306 1 258 321 0 12 chr5 49617488 49617572 -150012578 - MIR SINE MIR -173 89 7 204 146 24 0 chr5 49617627 49617668 -150012482 + GA-rich Low_complexity Low_complexity 1 42 0 35 24 0 0 chr5 49618655 49618697 -150011453 + AT_rich Low_complexity Low_complexity 1 42 0 227 316 29 73 chr5 49621090 49621226 -150008924 + MLT1K LTR MaLR 16 145 -443 395 295 104 17 chr5 49621266 49621439 -150008711 + MLT1K LTR MaLR 237 424 -164 2103 175 42 22 chr5 49621553 49622009 -150008141 - MLT1C LTR MaLR 0 467 3 290 347 44 21 chr5 49623013 49623235 -150006915 + MIR SINE MIR 16 262 0 521 246 78 57 chr5 49623461 49623705 -150006445 - LTR16A1 LTR ERVL 0 457 209 1990 107 0 0 chr5 49624882 49625134 -150005016 - AluSx SINE Alu -39 273 22 810 286 67 44 chr5 49625703 49626182 -150003968 - L1ME4a LINE L1 -156 5965 5476 244 369 40 13 chr5 49626961 49627110 -150003040 + MIR3 SINE MIR 28 180 -28 1740 27 32 9 chr5 49627541 49627762 -150002388 - L1PA4 LINE L1 0 6155 5930 787 258 135 56 chr5 49628369 49628904 -150001246 + LTR50 LTR ERVL 17 593 -202 309 207 85 0 chr5 49628945 49629027 -150001123 + LTR33A LTR ERVL 430 518 -5 1015 243 164 22 chr5 49630647 49630775 -149999375 + MLT1A1 LTR MaLR 4 112 -253 2604 17 40 0 chr5 49630775 49631074 -149999076 - AluY SINE Alu 0 311 1 1015 243 164 22 chr5 49631074 49631262 -149998888 + MLT1A1 LTR MaLR 112 365 0 642 151 103 16 chr5 49631262 49631388 -149998762 + MLT1A1-int LTR MaLR 3 139 -1596 21 36 0 0 chr5 49631520 49631548 -149998602 + AT_rich Low_complexity Low_complexity 1 28 0 259 323 24 71 chr5 49631983 49632110 -149998040 + MIR SINE MIR 23 143 -65 230 254 35 26 chr5 49632799 49632913 -149997237 + (TCTA)n Simple_repeat Simple_repeat 4 118 0 446 258 18 18 chr5 49632934 49633097 -149997053 + HAL1b LINE L1 1179 1341 -7 231 279 0 29 chr5 49633141 49633209 -149996941 + MIR SINE MIR 126 191 -71 213 65 0 0 chr5 49633839 49633870 -149996280 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 415 277 20 0 chr5 49635902 49636003 -149994147 + MER5A DNA MER1_type 4 106 -83 24 0 0 0 chr5 49636272 49636296 -149993854 + AT_rich Low_complexity Low_complexity 1 24 0 2298 94 0 13 chr5 49636776 49637083 -149993067 + AluSx SINE Alu 1 303 -9 1840 90 28 164 chr5 49637404 49637836 -149992314 - THE1C LTR MaLR -2 373 1 419 321 69 0 chr5 49638041 49638287 -149991863 - LTR16C LTR ERVL -2 489 227 585 228 0 15 chr5 49638895 49639031 -149991119 + L1PA16 LINE L1 6033 6166 0 2358 172 25 20 chr5 49639359 49639806 -149990344 - MER39 LTR ERV1 0 707 259 208 275 66 11 chr5 49640865 49640956 -149989194 - MIR SINE MIR -70 192 97 432 303 8 0 chr5 49640960 49641082 -149989068 - LTR16A1 LTR ERVL -2 455 333 21 0 0 0 chr5 49641595 49641616 -149988534 + AT_rich Low_complexity Low_complexity 1 21 0 205 89 44 0 chr5 49641706 49641751 -149988399 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 205 321 0 24 chr5 49642033 49642117 -149988033 - MIR SINE MIR -173 89 8 247 380 88 41 chr5 49642151 49642333 -149987817 + L3 LINE CR1 1143 1315 -262 1802 83 4 0 chr5 49642333 49642573 -149987577 + L1PA7 LINE L1 5914 6154 0 247 380 88 41 chr5 49642573 49642777 -149987373 + L3 LINE CR1 1315 1547 -30 2371 61 0 0 chr5 49642878 49643172 -149986978 - AluY SINE Alu -17 294 1 303 154 0 0 chr5 49746006 49746071 -149884079 + CT-rich Low_complexity Low_complexity 1 65 0 272 264 38 66 chr5 49746076 49746182 -149883968 - L2 LINE L2 -31 3241 3139 311 276 148 28 chr5 49746602 49746819 -149883331 - L1ME4a LINE L1 -26 6095 5853 335 257 35 35 chr5 49748112 49748225 -149881925 - L2 LINE L2 0 3313 3201 207 318 48 40 chr5 49748614 49748740 -149881410 - L2 LINE L2 0 3313 3187 384 268 62 0 chr5 49749192 49749289 -149880861 - MIR SINE MIR -69 193 91 621 149 0 106 chr5 49750730 49750871 -149879279 - FLAM_C SINE Alu -6 127 2 21 36 0 0 chr5 49751287 49751315 -149878835 + AT_rich Low_complexity Low_complexity 1 28 0 390 360 32 11 chr5 49751343 49751529 -149878621 + MIR SINE MIR 3 192 -70 549 167 50 0 chr5 49755063 49755177 -149874973 + L1ME1 LINE L1 6058 6177 -1 1416 185 16 16 chr5 49755329 49755637 -149874513 - L1MA6 LINE L1 -1 6299 5992 208 360 0 0 chr5 49755713 49755788 -149874362 + L2 LINE L2 3223 3297 -16 754 183 0 8 chr5 49755849 49755980 -149874170 - FLAM_C SINE Alu 0 133 4 30 27 0 0 chr5 49756001 49756038 -149874112 + AT_rich Low_complexity Low_complexity 1 37 0 524 339 69 37 chr5 49757378 49757859 -149872291 + MLT1J LTR MaLR 1 496 -15 25 0 0 0 chr5 49758385 49758410 -149871740 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 49758445 49758466 -149871684 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr5 49759579 49759605 -149870545 + (TAG)n Simple_repeat Simple_repeat 2 27 0 232 271 0 0 chr5 49759620 49759679 -149870471 - MIR SINE MIR -10 252 194 448 177 13 0 chr5 49759679 49759758 -149870392 - MER116 DNA Mariner 0 80 1 801 207 41 0 chr5 49759758 49759927 -149870223 - MIR SINE MIR -79 183 8 549 246 140 18 chr5 49759936 49760107 -149870043 - MIR SINE MIR -41 221 30 203 360 45 92 chr5 49760401 49760804 -149869346 + L2 LINE L2 996 1379 -1935 555 79 0 0 chr5 49761061 49761137 -149869013 - L1PA8 LINE L1 -221 5910 5835 1832 66 0 0 chr5 49761137 49761378 -149868772 + L1PA8 LINE L1 5925 6168 -4 226 293 30 50 chr5 49761883 49761982 -149868168 + L2 LINE L2 1833 1929 -1385 299 324 46 35 chr5 49762070 49762243 -149867907 - L2 LINE L2 0 3313 3139 1569 140 79 11 chr5 49762272 49762565 -149867585 + AluSx SINE Alu 1 311 0 27 73 0 0 chr5 49764555 49764610 -149865540 + AT_rich Low_complexity Low_complexity 1 55 0 271 59 0 0 chr5 49764850 49764884 -149865266 - HSMAR1 DNA Mariner 0 1287 1254 2444 72 0 0 chr5 49765661 49765966 -149864184 - AluY SINE Alu -6 305 1 23 0 0 0 chr5 49768507 49768530 -149861620 + AT_rich Low_complexity Low_complexity 1 23 0 397 230 90 0 chr5 49768905 49769005 -149861145 - MER5B DNA MER1_type -5 173 65 354 61 0 0 chr5 49770578 49770627 -149859523 + (GA)n Simple_repeat Simple_repeat 1 49 0 206 318 15 15 chr5 49771585 49771651 -149858499 + MIR3 SINE MIR 5 70 -138 245 271 215 0 chr5 49771904 49772011 -149858139 + MER91B DNA MER1_type 1 130 -60 320 238 0 50 chr5 49772026 49772106 -149858044 + MER91B DNA MER1_type 87 162 -28 390 335 111 8 chr5 49772850 49773123 -149857027 + L2 LINE L2 2686 3007 -306 2400 53 0 10 chr5 49773123 49773426 -149856724 - AluY SINE Alu -11 300 1 390 335 111 8 chr5 49773426 49773496 -149856654 + L2 LINE L2 3007 3068 -245 26 30 0 0 chr5 49774936 49774969 -149855181 + AT_rich Low_complexity Low_complexity 1 33 0 3827 263 117 61 chr5 49775348 49775852 -149854298 - L1MC3 LINE L1 -78 7707 7233 276 220 17 0 chr5 49775852 49775911 -149854239 - MLT1F1 LTR MaLR -480 87 28 3827 263 117 61 chr5 49775911 49776044 -149854106 - L1MC3 LINE L1 -552 7233 7109 216 0 0 0 chr5 49776044 49776068 -149854082 + (TA)n Simple_repeat Simple_repeat 2 25 0 3827 263 117 61 chr5 49776068 49776458 -149853692 - L1MC3 LINE L1 -676 7109 6742 399 21 0 0 chr5 49776458 49776506 -149853644 + (CA)n Simple_repeat Simple_repeat 2 49 0 3827 263 117 61 chr5 49776506 49777472 -149852678 - L1MC3 LINE L1 -1043 6742 5538 523 184 0 0 chr5 49777479 49777566 -149852584 - Tigger5 DNA MER2_type 0 2323 2237 1965 241 56 58 chr5 49777622 49779221 -149850929 - L1MC3 LINE L1 -627 5539 3789 1581 165 53 7 chr5 49779240 49779525 -149850625 - AluJo SINE Alu -1 311 14 378 0 0 0 chr5 49779545 49779587 -149850563 + (TC)n Simple_repeat Simple_repeat 2 43 0 266 92 46 15 chr5 49779587 49779652 -149850498 + (TA)n Simple_repeat Simple_repeat 1 67 0 746 241 39 9 chr5 49779681 49779963 -149850187 - L1MCc LINE L1 -2370 4571 4278 * 2139 276 76 39 chr5 49779937 49781230 -149848920 - L1MCc LINE L1 -3638 3303 2060 1848 156 7 3 chr5 49781230 49781518 -149848632 + AluSx SINE Alu 1 289 -23 524 56 14 0 chr5 49781520 49781592 -149848558 + (TA)n Simple_repeat Simple_repeat 2 74 0 2139 276 76 39 chr5 49781592 49782545 -149847605 - L1MCc LINE L1 -4881 2060 814 361 284 77 91 chr5 49782732 49783141 -149847009 - L1MCc LINE L1 -5629 793 52 227 305 98 24 chr5 49783616 49783741 -149846409 - MIR SINE MIR -61 147 21 1480 164 120 23 chr5 49783933 49784275 -149845875 - THE1C LTR MaLR 0 375 1 263 323 21 21 chr5 49784293 49784386 -149845764 + MIR SINE MIR 20 112 -150 261 0 0 0 chr5 49784783 49784812 -149845338 + (TG)n Simple_repeat Simple_repeat 1 29 0 1526 98 31 21 chr5 49784895 49785165 -149844985 - THE1B LTR MaLR -2 362 1 1084 243 25 4 chr5 49785323 49785562 -149844588 - L1MCa LINE L1 -5797 629 386 803 221 54 68 chr5 49785562 49785842 -149844308 - MLT1A1 LTR MaLR -89 276 1 304 132 0 38 chr5 49785847 49785900 -149844250 - MSTC LTR MaLR -377 51 1 1311 217 22 50 chr5 49785937 49786259 -149843891 - L1MCa LINE L1 -6095 331 19 571 289 61 31 chr5 49786602 49786830 -149843320 + MIR SINE MIR 8 242 -20 369 317 87 29 chr5 49786860 49787068 -149843082 + L3 LINE CR1 1348 1567 -10 343 221 0 158 chr5 49787416 49787543 -149842607 + MER102a DNA MER1_type 222 328 -2 210 71 0 0 chr5 49787786 49787814 -149842336 + (TA)n Simple_repeat Simple_repeat 1 28 0 2208 104 20 0 chr5 49788661 49788959 -149841191 - AluSq SINE Alu -9 304 1 1244 124 62 44 chr5 49790059 49790178 -149839972 - MER30 DNA MER1_type 0 230 104 198 0 0 0 chr5 49790178 49790200 -149839950 + (TTA)n Simple_repeat Simple_repeat 3 24 0 1244 124 62 44 chr5 49790200 49790306 -149839844 - MER30 DNA MER1_type -126 104 1 262 297 42 33 chr5 49790636 49790848 -149839302 - L1ME4a LINE L1 -16 6105 5892 411 323 97 26 chr5 49790853 49791203 -149838947 - L1ME4a LINE L1 -265 5856 5482 22 70 0 0 chr5 49791230 49791273 -149838877 + AT_rich Low_complexity Low_complexity 1 43 0 7214 44 2 1 chr5 49791422 49792703 -149837447 + L1PA5 LINE L1 4867 6148 -6 25 105 0 0 chr5 49792990 49793085 -149837065 + AT_rich Low_complexity Low_complexity 1 95 0 271 398 0 0 chr5 49793114 49793217 -149836933 - L2 LINE L2 -19 3294 3192 370 315 162 44 chr5 49793607 49794125 -149836025 - L1ME4a LINE L1 -1617 4529 3954 224 200 0 0 chr5 49795063 49795103 -149835047 + (CAT)n Simple_repeat Simple_repeat 3 42 0 21 0 0 0 chr5 49796179 49796200 -149833950 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr5 49799077 49799125 -149831025 + AT_rich Low_complexity Low_complexity 1 48 0 559 158 42 0 chr5 49799265 49799385 -149830765 + L1MA7 LINE L1 6156 6280 -11 24 53 0 0 chr5 49801055 49801093 -149829057 + AT_rich Low_complexity Low_complexity 1 38 0 24 53 0 0 chr5 49801324 49801362 -149828788 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr5 49802367 49802396 -149827754 + AT_rich Low_complexity Low_complexity 1 29 0 1353 164 11 0 chr5 49802403 49802672 -149827478 - L1MA4 LINE L1 -6 6294 6023 317 287 69 0 chr5 49802905 49802992 -149827158 + L2 LINE L2 3168 3260 -12 21 0 0 0 chr5 49803149 49803170 -149826980 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 49805074 49805103 -149825047 + AT_rich Low_complexity Low_complexity 1 29 0 218 286 71 32 chr5 49805245 49805371 -149824779 + MIR SINE MIR 118 248 -14 252 333 32 11 chr5 49807529 49807622 -149822528 - L2 LINE L2 0 3272 3178 206 362 49 32 chr5 49809085 49809270 -149820880 + MER5A DNA MER1_type 1 188 -1 200 348 130 0 chr5 49809276 49809368 -149820782 + L2 LINE L2 3153 3256 -16 2214 110 15 0 chr5 49809451 49809777 -149820373 + L1PA15 LINE L1 5835 6165 0 4094 266 84 25 chr5 49809805 49811536 -149818614 + L1M4b LINE L1 345 2196 -4763 327 25 0 0 chr5 49811536 49811576 -149818574 + (CA)n Simple_repeat Simple_repeat 2 41 0 4094 266 84 25 chr5 49811576 49811803 -149818347 + L1M4b LINE L1 2196 2408 -4551 2887 159 18 38 chr5 49811888 49812443 -149817707 + Tigger3b DNA MER2_type 2 545 -686 2345 81 39 0 chr5 49812445 49812780 -149817370 - L1PA7 LINE L1 -1 6153 5806 4571 211 32 11 chr5 49812780 49813900 -149816250 - L1 LINE L1 -2358 5207 4064 295 204 34 11 chr5 49813952 49814040 -149816110 - L1MC4 LINE L1 -1339 6703 6614 850 257 32 8 chr5 49814074 49814323 -149815827 - L1 LINE L1 -3493 4072 3818 184 91 78 26 chr5 49814352 49814429 -149815721 + (CATAT)n Simple_repeat Simple_repeat 2 82 0 330 168 71 51 chr5 49814440 49814790 -149815360 + (CACAT)n Simple_repeat Simple_repeat 1 356 0 * 356 96 132 15 chr5 49814668 49814890 -149815260 + (CATAT)n Simple_repeat Simple_repeat 1 247 0 394 133 0 92 chr5 49814908 49815104 -149815046 + (TA)n Simple_repeat Simple_repeat 2 179 0 312 120 105 8 chr5 49815109 49815242 -149814908 + (CATAT)n Simple_repeat Simple_repeat 2 147 0 1928 244 59 55 chr5 49815258 49816612 -149813538 - L1 LINE L1 -3734 3831 2558 3792 54 4 0 chr5 49816615 49817093 -149813057 - L1PA7 LINE L1 0 6154 5675 720 173 39 130 chr5 49817226 49817480 -149812670 + MLT1C LTR MaLR 68 298 -169 4158 238 52 27 chr5 49817556 49819033 -149811117 - L1MCb LINE L1 -2134 4430 2917 3257 229 59 32 chr5 49819044 49820968 -149809182 - L1MCb LINE L1 -3894 2851 671 1009 176 38 25 chr5 49820968 49821206 -149808944 + L1MB7 LINE L1 5944 6184 0 347 345 72 30 chr5 49821293 49821626 -149808524 + L1ME4a LINE L1 5772 6118 -3 30 0 0 0 chr5 49822560 49822590 -149807560 + AT_rich Low_complexity Low_complexity 1 30 0 950 218 23 5 chr5 49822925 49823145 -149807005 - MER58A DNA MER1_type 0 224 1 21 71 0 0 chr5 49823573 49823615 -149806535 + AT_rich Low_complexity Low_complexity 1 42 0 1733 241 58 24 chr5 49824425 49824877 -149805273 + MLT2B1 LTR ERVL 1 467 -53 614 285 84 18 chr5 49826144 49826418 -149803732 - L2 LINE L2 -98 3215 2924 1701 209 30 70 chr5 49826614 49827088 -149803062 - MLT1C LTR MaLR 0 467 13 22 0 0 0 chr5 49829450 49829472 -149800678 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr5 49829787 49829825 -149800325 + AT_rich Low_complexity Low_complexity 1 38 0 231 297 138 14 chr5 49829890 49830166 -149799984 + L1MC4a LINE L1 5080 5389 -757 323 396 58 16 chr5 49830174 49830608 -149799542 + L1MC4a LINE L1 5398 5849 -1959 288 0 0 0 chr5 49831592 49831624 -149798526 + (TG)n Simple_repeat Simple_repeat 1 32 0 180 0 0 0 chr5 49831623 49831643 -149798507 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 3558 243 75 16 chr5 49831645 49832646 -149797504 + L1MD2 LINE L1 583 1642 -4898 1250 221 47 8 chr5 49832679 49833041 -149797109 + L1MD2 LINE L1 3258 3633 -2907 2376 160 10 22 chr5 49833043 49833455 -149796695 + MLT2D LTR ERVL 1 407 -7 4137 249 27 51 chr5 49833462 49835039 -149795111 + L1MD2 LINE L1 3628 5166 -1374 290 118 59 0 chr5 49835056 49835107 -149795043 + MADE1 DNA Mariner 2 55 -25 2727 234 94 14 chr5 49835107 49835457 -149794693 + L1MD2 LINE L1 5483 5804 -949 2266 155 39 101 chr5 49835457 49835543 -149794607 - MER44D DNA MER2_type -1882 605 515 237 65 0 0 chr5 49835543 49835574 -149794576 + (TG)n Simple_repeat Simple_repeat 2 32 0 2266 155 39 101 chr5 49835574 49836073 -149794077 - MER44D DNA MER2_type -1972 515 1 2727 234 94 14 chr5 49836073 49836699 -149793451 + L1MD2 LINE L1 5804 6539 -214 350 308 120 0 chr5 49837606 49837739 -149792411 + MIR3 SINE MIR 20 168 -40 342 317 85 20 chr5 49840202 49840401 -149789749 - MIR SINE MIR -14 248 37 208 224 313 0 chr5 49841919 49841986 -149788164 - L3b LINE CR1 -134 1449 1362 21 36 0 0 chr5 49844851 49844879 -149785271 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr5 49845029 49845056 -149785094 + (TA)n Simple_repeat Simple_repeat 2 28 0 275 0 0 28 chr5 49846296 49846332 -149783818 + (TG)n Simple_repeat Simple_repeat 2 36 0 267 256 164 39 chr5 49846917 49847229 -149782921 - L1ME4a LINE L1 -4 6117 5767 253 340 54 44 chr5 49847583 49847633 -149782517 - L1ME4a LINE L1 -2002 5806 5758 2051 144 8 27 chr5 49847633 49848001 -149782149 - MER46B DNA MER2_type 0 236 1 253 340 54 44 chr5 49848001 49848247 -149781903 - L1ME4a LINE L1 -2050 5758 5507 21 0 0 0 chr5 49848276 49848297 -149781853 + AT_rich Low_complexity Low_complexity 1 21 0 184 227 0 27 chr5 49848357 49848432 -149781718 + CT-rich Low_complexity Low_complexity 2 74 0 246 229 0 0 chr5 49848492 49848562 -149781588 + (TA)n Simple_repeat Simple_repeat 2 71 0 376 294 65 75 chr5 49849287 49849672 -149780478 + L1ME3A LINE L1 778 1158 -4961 24 32 0 0 chr5 49850093 49850124 -149780026 + AT_rich Low_complexity Low_complexity 1 31 0 309 327 18 12 chr5 49850184 49850352 -149779798 + L1ME3A LINE L1 4926 5094 -1035 777 278 39 54 chr5 49850368 49850506 -149779644 + L1ME3A LINE L1 5611 5750 -403 1990 104 21 7 chr5 49850506 49850795 -149779355 + AluSq SINE Alu 1 293 -20 777 278 39 54 chr5 49850795 49850990 -149779160 + L1ME3A LINE L1 5750 5939 -214 1688 181 27 40 chr5 49851019 49851243 -149778907 - MLT1A1 LTR MaLR 0 365 146 2409 57 0 19 chr5 49851243 49851559 -149778591 - AluY SINE Alu -1 310 1 1688 181 27 40 chr5 49851559 49851704 -149778446 - MLT1A1 LTR MaLR -219 146 1 203 88 29 0 chr5 49851930 49851964 -149778186 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 26 74 0 0 chr5 49853702 49853756 -149776394 + AT_rich Low_complexity Low_complexity 1 54 0 27 49 0 0 chr5 49853888 49853929 -149776221 + AT_rich Low_complexity Low_complexity 1 41 0 8100 157 19 30 chr5 49854097 49855784 -149774366 + L1MA4A LINE L1 3663 5316 -987 2138 91 21 7 chr5 49855784 49856071 -149774079 + AluSg SINE Alu 1 291 -19 8100 157 19 30 chr5 49856071 49857042 -149773108 + L1MA4A LINE L1 5316 6296 -7 281 328 49 33 chr5 49857073 49857195 -149772955 - L2 LINE L2 0 3313 3190 776 296 120 7 chr5 49857452 49857894 -149772256 + Charlie7 DNA MER1_type 224 715 -1897 290 240 0 10 chr5 49858522 49858618 -149771532 + (TA)n Simple_repeat Simple_repeat 2 96 0 248 0 31 0 chr5 49858728 49858760 -149771390 + (TG)n Simple_repeat Simple_repeat 2 34 0 180 125 0 0 chr5 49858778 49858810 -149771340 + (TA)n Simple_repeat Simple_repeat 2 33 0 202 217 9 9 chr5 49858974 49859080 -149771070 + (TA)n Simple_repeat Simple_repeat 2 107 0 1298 179 47 30 chr5 49859556 49859671 -149770479 + AluJo SINE Alu 4 116 -196 216 97 0 0 chr5 49859671 49859702 -149770448 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 1298 179 47 30 chr5 49859702 49859912 -149770238 + AluJo SINE Alu 116 312 0 24 53 0 0 chr5 49860609 49860647 -149769503 + AT_rich Low_complexity Low_complexity 1 38 0 323 310 92 42 chr5 49863385 49863624 -149766526 - L2 LINE L2 0 3313 3063 234 62 0 0 chr5 49864009 49864041 -149766109 + (GA)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr5 49864430 49864451 -149765699 + AT_rich Low_complexity Low_complexity 1 21 0 29 84 0 0 chr5 49864628 49864699 -149765451 + AT_rich Low_complexity Low_complexity 1 71 0 229 311 46 77 chr5 49866173 49866369 -149763781 - L2 LINE L2 -86 3186 2997 230 332 20 40 chr5 49866475 49866674 -149763476 - L2 LINE L2 -444 2870 2676 377 264 123 0 chr5 49866703 49866809 -149763341 + L2 LINE L2 3153 3271 -1 22 0 0 0 chr5 49867318 49867340 -149762810 + AT_rich Low_complexity Low_complexity 1 22 0 405 135 9 21 chr5 49867991 49868071 -149762079 - L1PA13 LINE L1 -6 6160 6085 45 0 0 0 chr5 49868074 49868119 -149762031 + AT_rich Low_complexity Low_complexity 1 45 0 26 30 0 0 chr5 49869631 49869664 -149760486 + AT_rich Low_complexity Low_complexity 1 33 0 250 306 99 0 chr5 49869665 49869776 -149760374 - L2 LINE L2 -1561 1753 1632 259 382 11 0 chr5 49869946 49870035 -149760115 - L2 LINE L2 -334 2979 2890 453 310 76 12 chr5 49870325 49870496 -149759654 - MIR SINE MIR -1 261 80 885 250 79 0 chr5 49870751 49870967 -149759183 + MIR SINE MIR 9 241 -21 2217 87 3 13 chr5 49871174 49871483 -149758667 - AluY SINE Alu -3 308 3 264 259 17 0 chr5 49871531 49871589 -149758561 - MIR SINE MIR -123 85 27 230 111 28 0 chr5 49872300 49872336 -149757814 + L2 LINE L2 3265 3301 -12 225 329 26 13 chr5 49872356 49872432 -149757718 - MIR SINE MIR -166 96 20 1987 119 3 23 chr5 49872554 49872864 -149757286 - AluSx SINE Alu -8 304 1 586 284 75 30 chr5 49874792 49875190 -149754960 - L1ME4a LINE L1 -157 5964 5549 432 310 66 38 chr5 49875233 49875446 -149754704 - L1ME4a LINE L1 -2336 5472 5254 22 0 0 0 chr5 49875602 49875624 -149754526 + AT_rich Low_complexity Low_complexity 1 22 0 212 77 26 0 chr5 49876446 49876485 -149753665 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1725 144 42 3 chr5 49876487 49876771 -149753379 - AluSx SINE Alu -16 296 2 5972 155 47 24 chr5 49876858 49877486 -149752664 + Tigger3b DNA MER2_type 2 614 -2414 2118 126 13 0 chr5 49877486 49877795 -149752355 - AluSq SINE Alu 0 313 1 5972 155 47 24 chr5 49877795 49878365 -149751785 + Tigger3b DNA MER2_type 614 1227 -4 23 0 0 0 chr5 49879883 49879906 -149750244 + AT_rich Low_complexity Low_complexity 1 23 0 273 333 9 0 chr5 49881590 49881701 -149748449 - L1M4 LINE L1 -3103 3043 2932 1612 167 167 16 chr5 49882022 49882394 -149747756 + MSTA LTR MaLR 1 428 0 1558 292 87 38 chr5 49882411 49883174 -149746976 + L1ME LINE L1 20 744 -5336 1587 211 89 18 chr5 49883174 49883610 -149746540 + MLT1C LTR MaLR 1 467 0 1558 292 87 38 chr5 49883610 49884558 -149745592 + L1ME LINE L1 744 1770 -4310 23 68 0 0 chr5 49884577 49884621 -149745529 + AT_rich Low_complexity Low_complexity 1 44 0 429 274 131 11 chr5 49884690 49884865 -149745285 + L1MDa LINE L1 877 1072 -5468 274 264 11 0 chr5 49885054 49885145 -149745005 - L1ME3 LINE L1 -5 6157 6066 1147 278 32 11 chr5 49885224 49885598 -149744552 - L1ME1 LINE L1 -134 6032 5651 * 3372 227 67 6 chr5 49885588 49886437 -149743713 - L1MC3 LINE L1 -17 7768 6868 820 217 67 35 chr5 49886476 49886790 -149743360 - L1ME1 LINE L1 -782 5577 5254 23 54 0 0 chr5 49887144 49887181 -149742969 + AT_rich Low_complexity Low_complexity 1 37 0 923 306 45 56 chr5 49887406 49887870 -149742280 + L3 LINE CR1 963 1421 -156 207 0 0 0 chr5 49887891 49887914 -149742236 + (A)n Simple_repeat Simple_repeat 1 23 0 1800 271 122 85 chr5 49888299 49889314 -149740836 + L2 LINE L2 1875 2927 -387 2112 223 66 0 chr5 49889320 49889746 -149740404 + MER70A LTR ERVL 19 472 0 212 316 177 0 chr5 49889747 49889826 -149740324 + L2 LINE L2 2919 3011 -302 1237 242 30 21 chr5 49889854 49890210 -149739940 + MLT1A1 LTR MaLR 3 396 0 510 258 79 57 chr5 49890213 49890442 -149739708 + L2 LINE L2 3057 3290 -23 465 82 0 0 chr5 49891010 49891083 -149739067 + Alu SINE Alu 239 311 0 690 285 43 41 chr5 49891448 49891780 -149738370 + LTR16A LTR ERVL 1 332 -118 210 264 38 0 chr5 49892933 49892986 -149737164 - L3b LINE CR1 -222 1361 1307 286 207 66 41 chr5 49894208 49894329 -149735821 + L1ME4a LINE L1 5841 5964 -157 1661 194 10 0 chr5 49894577 49894886 -149735264 + AluJb SINE Alu 1 312 0 24 53 0 0 chr5 49895916 49895954 -149734196 + AT_rich Low_complexity Low_complexity 1 38 0 925 298 80 71 chr5 49896226 49896877 -149733273 + L2 LINE L2 2267 2923 -391 1197 306 71 25 chr5 49897412 49898358 -149731792 - L2 LINE L2 -17 3296 2307 21 71 0 0 chr5 49903817 49903859 -149726291 + AT_rich Low_complexity Low_complexity 1 42 0 3313 147 75 8 chr5 49904004 49904602 -149725548 - L1MC1 LINE L1 -13 6320 5683 184 224 0 41 chr5 49904894 49904943 -149725207 + MIR SINE MIR 124 170 -92 349 308 28 0 chr5 49904988 49905095 -149725055 - MIR SINE MIR -69 193 84 251 346 0 0 chr5 49905145 49905252 -149724898 + MIR SINE MIR 156 262 0 265 316 115 13 chr5 49905255 49905437 -149724713 - MIR SINE MIR -28 234 32 2464 74 0 0 chr5 49905944 49906254 -149723896 - AluY SINE Alu -1 310 1 619 247 45 39 chr5 49906848 49907026 -149723124 - MER97a DNA MER1_type? -715 179 1 483 274 29 86 chr5 49907123 49907368 -149722782 + L2 LINE L2 3077 3307 -6 210 297 60 77 chr5 49907499 49907681 -149722469 - L2 LINE L2 -24 3289 3111 1952 94 0 21 chr5 49907731 49908019 -149722131 - L1P LINE L1 -2103 4043 3762 6748 62 5 21 chr5 49908021 49908815 -149721335 + L1PA8 LINE L1 4697 5457 -715 2085 122 7 3 chr5 49908815 49909110 -149721040 + AluSg SINE Alu 1 296 -14 6748 62 5 21 chr5 49909110 49909815 -149720335 + L1PA8 LINE L1 5457 6172 0 374 183 65 0 chr5 49910683 49910776 -149719374 - L1MA8 LINE L1 -7 6284 6186 816 174 0 0 chr5 49912020 49912152 -149717998 - AluSg/x SINE Alu -39 273 142 333 82 0 0 chr5 49912590 49912639 -149717511 + (ATG)n Simple_repeat Simple_repeat 3 51 0 225 307 164 36 chr5 49912730 49912870 -149717280 - MIR3 SINE MIR 0 208 51 234 148 37 19 chr5 49913014 49913068 -149717082 + GA-rich Low_complexity Low_complexity 2 56 0 459 267 74 92 chr5 49913553 49913770 -149716380 + MLT1L LTR MaLR 277 546 -22 237 159 0 0 chr5 49914620 49914664 -149715486 + A-rich Low_complexity Low_complexity 1 44 0 1498 317 81 2 chr5 49914776 49915281 -149714869 + MLT1H1 LTR MaLR 3 547 -8 372 309 15 0 chr5 49915285 49915421 -149714729 + L1MC/D LINE L1 5673 5810 -1998 14892 46 3 0 chr5 49915509 49921511 -149708639 + L1PA4 LINE L1 1 6155 0 1928 248 58 52 chr5 49921514 49922851 -149707299 + L1M2 LINE L1 2558 3817 -3748 14892 41 3 1 chr5 49922952 49928286 -149701864 + L1PA4 LINE L1 676 6152 -3 402 308 69 52 chr5 49929104 49929526 -149700624 - L1M4 LINE L1 -2391 3755 3327 330 278 156 0 chr5 49929597 49929777 -149700373 - L1M4 LINE L1 -2970 3176 2969 24 53 0 0 chr5 49930118 49930156 -149699994 + AT_rich Low_complexity Low_complexity 1 38 0 390 321 127 6 chr5 49931272 49931437 -149698713 + MIR SINE MIR 75 259 -3 23 33 0 0 chr5 49931468 49931498 -149698652 + AT_rich Low_complexity Low_complexity 1 30 0 1625 148 78 31 chr5 49932535 49932893 -149697257 + THE1C LTR MaLR 1 375 0 35 54 0 0 chr5 49933477 49933533 -149696617 + AT_rich Low_complexity Low_complexity 1 56 0 39 22 0 0 chr5 49934714 49934760 -149695390 + AT_rich Low_complexity Low_complexity 1 46 0 1267 196 37 43 chr5 49934777 49935103 -149695047 - MER33 DNA MER1_type 0 324 1 325 322 166 24 chr5 49935970 49936181 -149693969 + MIR SINE MIR 18 258 -4 484 333 65 84 chr5 49936256 49936718 -149693432 - L2 LINE L2 0 3272 2820 444 325 110 5 chr5 49938676 49938885 -149691265 + MIR SINE MIR 15 245 -17 208 227 0 0 chr5 49938903 49938947 -149691203 + (CTA)n Simple_repeat Simple_repeat 3 46 0 420 272 84 108 chr5 49938977 49939593 -149690557 - L3 LINE CR1 -15 1562 898 445 333 126 22 chr5 49939672 49939942 -149690208 - L3 LINE CR1 -903 674 377 224 351 0 13 chr5 49940922 49940999 -149689151 - L2 LINE L2 -212 3060 2985 517 296 88 21 chr5 49942701 49942950 -149687200 - MIR SINE MIR -1 261 3 335 71 0 18 chr5 49943528 49943584 -149686566 + (TG)n Simple_repeat Simple_repeat 2 56 0 2305 107 7 0 chr5 49944538 49944848 -149685302 + AluSx SINE Alu 1 312 0 1924 137 14 0 chr5 49946409 49946702 -149683448 + AluSx SINE Alu 1 297 -15 213 65 0 0 chr5 49946769 49946800 -149683350 + (TAAAA)n Simple_repeat Simple_repeat 1 31 0 21 82 0 0 chr5 49947107 49947156 -149682994 + AT_rich Low_complexity Low_complexity 1 49 0 41 36 0 0 chr5 49949631 49949686 -149680464 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr5 49951511 49951532 -149678618 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 49951582 49951603 -149678547 + AT_rich Low_complexity Low_complexity 1 21 0 364 392 34 13 chr5 49951670 49951907 -149678243 - L3 LINE CR1 -11 1566 1325 889 214 12 0 chr5 49952112 49952285 -149677865 - FAM SINE Alu 0 175 1 1758 168 3 7 chr5 49952319 49952605 -149677545 + AluJb SINE Alu 1 285 -27 185 0 40 0 chr5 49952623 49952648 -149677502 + (CAA)n Simple_repeat Simple_repeat 2 27 0 312 260 73 24 chr5 49952728 49952851 -149677299 - MIR SINE MIR -133 129 1 256 300 39 46 chr5 49952916 49953046 -149677104 - L2 LINE L2 -653 2661 2533 194 207 17 0 chr5 49953069 49953127 -149677023 + CT-rich Low_complexity Low_complexity 3 61 0 553 325 93 26 chr5 49953177 49953488 -149676662 - L3 LINE CR1 -889 688 357 560 315 107 49 chr5 49954816 49955151 -149674999 + L2 LINE L2 1386 1769 -1545 7390 33 4 1 chr5 49955151 49956736 -149673414 - L1PA4 LINE L1 0 6155 4565 560 315 107 49 chr5 49956736 49956972 -149673178 + L2 LINE L2 1769 1990 -1324 640 329 178 28 chr5 49957214 49958149 -149672001 + L2 LINE L2 2037 3115 -198 889 127 0 7 chr5 49958171 49958313 -149671837 - L1PA15 LINE L1 -1 6164 6024 6949 62 8 0 chr5 49958317 49959968 -149670182 - L1PA8 LINE L1 0 6172 4505 479 185 0 0 chr5 49959968 49960049 -149670101 - L1PA15 LINE L1 -126 6039 5959 362 301 41 55 chr5 49960103 49960249 -149669901 + L2 LINE L2 3168 3311 -2 379 249 34 126 chr5 49960484 49960929 -149669221 - L1ME LINE L1 -5147 923 520 234 265 82 31 chr5 49961166 49961264 -149668886 - L1ME LINE L1 -5582 488 386 240 258 62 31 chr5 49961466 49961563 -149668587 - L1ME LINE L1 -5901 169 70 2053 118 3 3 chr5 49961735 49962032 -149668118 - AluSp SINE Alu -16 297 1 629 268 19 24 chr5 49962085 49962294 -149667856 + MER46C DNA MER2_type 124 331 -7 960 215 19 63 chr5 49963582 49963852 -149666298 - MIR SINE MIR 0 262 5 196 325 78 39 chr5 49964923 49965129 -149665021 - L2 LINE L2 -844 2470 2257 1952 171 5 60 chr5 49965153 49965567 -149664583 - MLT2C1 LTR ERVL 0 397 7 486 306 118 18 chr5 49965621 49965850 -149664300 + MIR SINE MIR 6 257 -5 666 70 0 0 chr5 49966258 49966344 -149663806 - L1PA7 LINE L1 -9 6145 6060 351 0 0 0 chr5 49967828 49967867 -149662283 + (TA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr5 49968274 49968304 -149661846 + AT_rich Low_complexity Low_complexity 1 30 0 336 304 155 5 chr5 49969463 49969657 -149660493 + MIR SINE MIR 23 245 -17 2268 98 0 13 chr5 49971273 49971578 -149658572 - AluSx SINE Alu -11 301 1 1926 92 60 14 chr5 49971763 49972046 -149658104 - AluSq SINE Alu -17 296 1 386 248 114 0 chr5 49972128 49972233 -149657917 - MIR3 SINE MIR -5 203 87 2095 115 6 19 chr5 49972457 49972770 -149657380 - AluSq SINE Alu -4 309 1 2147 116 10 3 chr5 49975141 49975443 -149654707 - AluSq SINE Alu -9 304 1 836 52 0 0 chr5 49976376 49976473 -149653677 - AluY SINE Alu -18 293 197 2327 89 3 10 chr5 49976473 49976777 -149653373 - AluY SINE Alu -8 303 2 353 370 27 0 chr5 49976974 49977120 -149653030 - MIR SINE MIR -6 256 107 311 255 104 19 chr5 49977403 49977509 -149652641 + MIR SINE MIR 56 170 -92 290 246 286 35 chr5 49978230 49978429 -149651721 + L3 LINE CR1 254 502 -1075 868 98 15 30 chr5 49978447 49978580 -149651570 - FLAM_C SINE Alu 0 133 3 32 81 0 0 chr5 49980361 49980435 -149649715 + AT_rich Low_complexity Low_complexity 1 74 0 368 335 147 42 chr5 49981743 49981782 -149648368 - L2 LINE L2 -36 3277 3244 356 59 20 0 chr5 49981782 49981833 -149648317 + (CA)n Simple_repeat Simple_repeat 2 53 0 368 335 147 42 chr5 49981833 49982351 -149647799 - L2 LINE L2 -69 3244 2660 783 254 80 31 chr5 49982357 49982647 -149647503 - MLT1F LTR MaLR -2 553 258 200 269 19 19 chr5 49983174 49983278 -149646872 + (TTAA)n Simple_repeat Simple_repeat 2 105 0 297 247 108 21 chr5 49983724 49983817 -149646333 - MLT1J2 LTR MaLR -302 148 48 1299 221 126 56 chr5 49984213 49984243 -149645907 - MLT1E2 LTR MaLR 0 626 600 2461 129 16 16 chr5 49984243 49984607 -149645543 - THE1B LTR MaLR 0 364 1 1299 221 126 56 chr5 49984607 49985111 -149645039 - MLT1E2 LTR MaLR -26 600 19 4897 47 9 26 chr5 49986060 49986742 -149643408 - L1P LINE L1 -914 5232 4563 567 323 187 29 chr5 49987281 49988173 -149641977 + L2 LINE L2 2037 3074 -239 937 128 0 7 chr5 49988238 49988379 -149641771 - L1PA15 LINE L1 -2 6163 6024 3007 117 25 10 chr5 49988383 49988863 -149641287 - L1PA8 LINE L1 0 6172 5686 1347 209 70 19 chr5 49989102 49989461 -149640689 + L1ME1 LINE L1 4890 5266 -880 1890 85 0 12 chr5 49989474 49989720 -149640430 + AluY SINE Alu 56 298 -13 2303 96 3 3 chr5 49989723 49990024 -149640126 + AluSx SINE Alu 3 303 -9 2844 216 51 16 chr5 49990046 49990735 -149639415 + L1ME1 LINE L1 5449 6161 -5 539 243 41 83 chr5 49990990 49991159 -149638991 + MER58A DNA MER1_type 24 185 -39 23959 55 2 2 chr5 49991383 49994426 -149635724 + L1P LINE L1 2170 5213 -933 456 163 23 0 chr5 49994633 49994762 -149635388 + (TA)n Simple_repeat Simple_repeat 2 133 0 271 235 0 78 chr5 49994764 49994866 -149635284 - L1MC4 LINE L1 -1335 6707 6614 254 311 0 0 chr5 49994862 49994952 -149635198 + L1MC4 LINE L1 6614 6703 -1339 * 239 322 0 0 chr5 49994904 49994994 -149635156 - L1MC4 LINE L1 -1339 6703 6614 * 302 304 94 7 chr5 49995670 49995808 -149634342 + L1MDa LINE L1 2449 2598 -3942 7282 62 0 5 chr5 49996111 49997482 -149632668 - L1PA7 LINE L1 -2 6152 4783 329 278 58 37 chr5 49997618 49997809 -149632341 - HAL1 LINE L1 -884 1623 1429 937 91 8 0 chr5 49997949 49998070 -149632080 - AluSp SINE Alu -181 132 11 974 212 38 5 chr5 49998746 49998958 -149631192 + MER58A DNA MER1_type 6 224 0 1927 111 8 0 chr5 49999594 49999855 -149630295 + AluSg SINE Alu 31 293 -17 324 70 0 0 chr5 49999855 49999898 -149630252 + (TA)n Simple_repeat Simple_repeat 1 43 0 204 167 24 0 chr5 50000042 50000084 -149630066 + T-rich Low_complexity Low_complexity 4 46 0 198 0 0 0 chr5 50000581 50000603 -149629547 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 440 317 0 73 chr5 50000647 50000852 -149629298 - MIR3 SINE MIR -3 205 16 223 125 50 0 chr5 50001687 50001727 -149628423 + (CATA)n Simple_repeat Simple_repeat 3 44 0 2049 73 11 18 chr5 50004108 50004380 -149625770 - AluY SINE Alu -41 270 1 2246 77 24 0 chr5 50004446 50004733 -149625417 - AluY SINE Alu -9 302 9 963 268 80 31 chr5 50004811 50005262 -149624888 + L2 LINE L2 2818 3290 -23 2227 74 0 0 chr5 50005378 50005648 -149624502 + AluSx SINE Alu 31 300 -12 677 71 12 0 chr5 50006033 50006117 -149624033 + AluS SINE Alu 1 85 -227 1251 58 58 0 chr5 50006117 50006273 -149623877 + AluY SINE Alu 134 298 -13 2052 142 0 7 chr5 50006456 50006759 -149623391 + AluSx SINE Alu 1 301 -11 1547 175 18 14 chr5 50009734 50010020 -149620130 - AluJb SINE Alu -25 287 1 603 86 0 0 chr5 50011382 50011463 -149618687 + L1PA5 LINE L1 6074 6154 0 1575 175 35 7 chr5 50012712 50012997 -149617153 - AluJb SINE Alu -19 293 1 180 125 0 0 chr5 50013137 50013169 -149616981 + (GAAA)n Simple_repeat Simple_repeat 3 34 0 1794 146 26 79 chr5 50013313 50013495 -149616655 - L1MA5 LINE L1 0 6300 6110 2008 113 25 0 chr5 50013495 50013827 -149616323 + AluSg SINE Alu 1 339 0 1794 146 26 79 chr5 50013827 50014059 -149616091 - L1MA5 LINE L1 -190 6110 5906 3711 127 45 25 chr5 50014380 50015157 -149614993 - L1PA12 LINE L1 -295 5873 5077 746 261 55 21 chr5 50015286 50015524 -149614626 - MIR SINE MIR -12 250 5 544 163 12 4 chr5 50016611 50016706 -149613444 + MLT1A1 LTR MaLR 1 96 -278 1470 209 32 90 chr5 50016714 50017091 -149613059 + MLT1A1 LTR MaLR 11 365 0 809 226 71 31 chr5 50017115 50017341 -149612809 + MLT1A1 LTR MaLR 122 356 -9 448 287 27 13 chr5 50017419 50017569 -149612581 + MIR SINE MIR 110 261 -1 762 237 84 17 chr5 50018377 50019068 -149611082 - L1ME2 LINE L1 0 6164 5428 2516 70 0 0 chr5 50019333 50019632 -149610518 - AluY SINE Alu -12 299 1 23 0 0 0 chr5 50019721 50019744 -149610406 + AT_rich Low_complexity Low_complexity 1 23 0 1945 121 104 27 chr5 50019886 50020224 -149609926 - THE1B LTR MaLR 0 364 1 673 158 85 28 chr5 50020296 50020473 -149609677 + MER53 DNA DNA 2 188 -1 961 119 5 133 chr5 50020666 50020884 -149609266 - MLT1B LTR MaLR -2 388 199 304 284 74 0 chr5 50021173 50021268 -149608882 + L2 LINE L2 3204 3305 -8 23 0 0 0 chr5 50021270 50021293 -149608857 + AT_rich Low_complexity Low_complexity 1 23 0 696 83 57 6 chr5 50022359 50022516 -149607634 + (TCTA)n Simple_repeat Simple_repeat 2 166 0 279 122 0 0 chr5 50022735 50022784 -149607366 + (TG)n Simple_repeat Simple_repeat 2 50 0 253 197 30 15 chr5 50023785 50023851 -149606299 + CT-rich Low_complexity Low_complexity 1 67 0 2155 169 38 38 chr5 50024300 50024726 -149605424 + MSTB LTR MaLR 1 426 0 22 0 0 0 chr5 50024739 50024761 -149605389 + AT_rich Low_complexity Low_complexity 1 22 0 2203 94 42 0 chr5 50024812 50025100 -149605050 + AluSx SINE Alu 1 300 -12 11643 149 32 35 chr5 50027153 50029277 -149600873 + Tigger1 DNA MER2_type 2 2119 -299 14576 45 5 2 chr5 50029381 50035389 -149594761 - L1PA3 LINE L1 -4 6151 1 232 320 20 0 chr5 50035477 50035577 -149594573 - L1MC/D LINE L1 -1998 5810 5709 231 194 45 30 chr5 50035710 50035777 -149594373 - LTR16A1 LTR ERVL -2 455 388 208 282 28 0 chr5 50035792 50035863 -149594287 + A-rich Low_complexity Low_complexity 4 76 0 204 40 0 0 chr5 50036090 50036115 -149594035 + (CAG)n Simple_repeat Simple_repeat 2 26 0 435 272 75 71 chr5 50037003 50037297 -149592853 - L1MEd LINE L1 -4918 1201 907 560 244 26 0 chr5 50039234 50039503 -149590647 + L1ME1 LINE L1 5812 6157 -9 28 0 0 0 chr5 50039505 50039533 -149590617 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr5 50040129 50040152 -149589998 + (A)n Simple_repeat Simple_repeat 1 23 0 268 288 8 68 chr5 50040558 50040676 -149589474 + L2 LINE L2 3203 3313 0 2116 8 0 8 chr5 50040700 50040936 -149589214 - AluY SINE Alu -8 303 70 332 295 47 78 chr5 50041490 50041683 -149588467 + HAL1 LINE L1 39 225 -2282 5303 226 43 13 chr5 50041683 50043541 -149586609 - L1MC/D LINE L1 -706 5627 3713 1866 293 113 65 chr5 50043535 50045298 -149584852 + HAL1 LINE L1 213 2060 -447 * 1412 215 7 23 chr5 50145507 50145809 -149484341 - AluJo SINE Alu -10 302 6 311 0 26 0 chr5 50146513 50146552 -149483598 + (CA)n Simple_repeat Simple_repeat 2 41 0 440 300 123 62 chr5 50146612 50147175 -149482975 - L1M4 LINE L1 -1302 4844 4248 256 284 81 56 chr5 50147236 50147433 -149482717 - L1M4 LINE L1 -1998 4148 3947 262 119 0 68 chr5 50147452 50147511 -149482639 + MLT1A1 LTR MaLR 295 349 -16 185 236 16 163 chr5 50149076 50149199 -149480951 - L2 LINE L2 -33 3280 3176 180 0 0 0 chr5 50149302 50149322 -149480828 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 1181 139 4 69 chr5 50149333 50149440 -149480710 + MER50 LTR ERV1 472 584 -150 2618 3 3 7 chr5 50149440 50149736 -149480414 - AluYa5 SINE Alu -16 295 1 1181 139 4 69 chr5 50149736 50149873 -149480277 + MER50 LTR ERV1 584 700 -34 312 330 140 48 chr5 50150297 50150655 -149479495 - LTR33A LTR ERVL -103 420 30 683 102 37 9 chr5 50150733 50150841 -149479309 - MSTB LTR MaLR -11 415 305 409 326 87 0 chr5 50151168 50151352 -149478798 - MIR SINE MIR -60 202 3 256 329 65 52 chr5 50151713 50151944 -149478206 - L2 LINE L2 -1209 2105 1872 1056 232 15 126 chr5 50151983 50152380 -149477770 - MLT1A2 LTR MaLR 0 374 22 269 348 11 0 chr5 50152440 50152532 -149477618 - L2 LINE L2 -1522 1792 1700 388 204 97 26 chr5 50152790 50152903 -149477247 + MIR SINE MIR 37 157 -105 1176 125 45 40 chr5 50153021 50153221 -149476929 - MLT1A1 LTR MaLR -164 201 1 200 313 96 43 chr5 50153630 50153745 -149476405 - L2 LINE L2 -5 3308 3188 2160 110 3 0 chr5 50154087 50154388 -149475762 - AluSg SINE Alu -8 302 1 1977 140 14 49 chr5 50154482 50154832 -149475318 + MER7A DNA MER2_type 2 337 -9 324 83 0 0 chr5 50155031 50155079 -149475071 + (TG)n Simple_repeat Simple_repeat 2 49 0 189 147 0 0 chr5 50156206 50156240 -149473910 + (T)n Simple_repeat Simple_repeat 1 34 0 28 0 0 0 chr5 50156341 50156369 -149473781 + AT_rich Low_complexity Low_complexity 1 28 0 2146 124 0 0 chr5 50157358 50157657 -149472493 + AluSq SINE Alu 1 299 -14 252 221 151 12 chr5 50159181 50159267 -149470883 + MER46C DNA MER2_type 16 113 -225 1285 200 85 7 chr5 50159368 50159638 -149470512 - MSTA LTR MaLR -137 291 1 330 351 30 12 chr5 50160980 50161145 -149469005 - L2 LINE L2 -865 2449 2282 2109 124 0 9 chr5 50161901 50162216 -149467934 - AluSx SINE Alu 0 312 1 24 0 0 0 chr5 50163436 50163460 -149466690 + AT_rich Low_complexity Low_complexity 1 24 0 631 143 8 63 chr5 50163460 50163586 -149466564 - L1PB3 LINE L1 -2 6152 6034 236 242 61 0 chr5 50164324 50164390 -149465760 - MIR SINE MIR -89 173 104 1525 268 25 44 chr5 50164835 50165277 -149464873 - LTR40a LTR ERVL -11 508 75 1785 128 37 4 chr5 50165277 50165608 -149464542 - AluSg SINE Alu 0 340 1 1525 268 25 44 chr5 50165608 50165682 -149464468 - LTR40a LTR ERVL -444 75 1 207 263 202 20 chr5 50166247 50166346 -149463804 - MIR SINE MIR -76 132 16 21 0 0 0 chr5 50166807 50166828 -149463322 + AT_rich Low_complexity Low_complexity 1 21 0 200 392 39 0 chr5 50167444 50167546 -149462604 - MIR SINE MIR -70 192 87 8869 83 3 1 chr5 50167973 50169661 -149460489 - L1PA7 LINE L1 -319 5835 4143 180 333 0 0 chr5 50169768 50169828 -149460322 - MIR SINE MIR -2 260 201 12103 139 16 16 chr5 50171091 50173079 -149457071 + Tigger1 DNA MER2_type 2 1988 -430 1710 69 0 0 chr5 50173180 50173398 -149456752 + L1PA7 LINE L1 5933 6150 -4 180 111 0 0 chr5 50174248 50174275 -149455875 + (A)n Simple_repeat Simple_repeat 1 27 0 23 68 0 0 chr5 50175075 50175119 -149455031 + AT_rich Low_complexity Low_complexity 1 44 0 24 32 0 0 chr5 50175169 50175200 -149454950 + AT_rich Low_complexity Low_complexity 1 31 0 29 60 0 0 chr5 50175439 50175489 -149454661 + AT_rich Low_complexity Low_complexity 1 50 0 1790 158 71 11 chr5 50177380 50177734 -149452416 + THE1C LTR MaLR 1 375 0 441 258 92 0 chr5 50178058 50178178 -149451972 - MER46C DNA MER2_type -8 330 200 2110 146 62 42 chr5 50178217 50178407 -149451743 + L1MA9 LINE L1 5871 6056 -256 1080 216 52 104 chr5 50178407 50178792 -149451358 + MLT1A1 LTR MaLR 1 365 0 2110 146 62 42 chr5 50178792 50179034 -149451116 + L1MA9 LINE L1 6056 6312 0 391 58 0 0 chr5 50179223 50179275 -149450875 + HERV17 LTR ERV1 998 1049 -7577 * 1714 110 14 29 chr5 50179262 50179667 -149450483 + HERV17 LTR ERV1 1275 1720 -5176 * 4729 90 2 0 chr5 50179662 50180304 -149449846 + HERV17 LTR ERV1 7757 8399 0 1335 58 246 0 chr5 50180304 50180511 -149449639 + LTR12 LTR ERV1 1 258 -456 357 265 17 0 chr5 50180511 50180628 -149449522 + LTR30 LTR ERV1 524 642 -80 1813 74 6 2 chr5 50180629 50180879 -149449271 + LTR12 LTR ERV1 375 714 0 2216 124 27 16 chr5 50181816 50182187 -149447963 + THE1C LTR MaLR 1 375 0 281 277 80 0 chr5 50182335 50182447 -149447703 + MLT1J LTR MaLR 385 505 -6 385 314 13 19 chr5 50182645 50182804 -149447346 + L1MEd LINE L1 9 166 -5953 270 270 0 14 chr5 50183801 50183875 -149446275 - L2 LINE L2 -1052 2262 2190 26 50 0 0 chr5 50185921 50185961 -149444189 + AT_rich Low_complexity Low_complexity 1 40 0 368 260 130 32 chr5 50186125 50186279 -149443871 + MIR SINE MIR 67 235 -27 194 182 0 0 chr5 50186280 50186313 -149443837 - MIR SINE MIR -2 260 228 1208 120 11 11 chr5 50186614 50186798 -149443352 - Charlie3 DNA MER1_type -12 2698 2515 225 159 0 0 chr5 50189764 50189808 -149440342 + (CA)n Simple_repeat Simple_repeat 2 45 0 218 288 65 72 chr5 50189816 50189969 -149440181 + L2 LINE L2 2127 2278 -1036 2781 228 32 25 chr5 50190519 50191237 -149438913 - L1ME1 LINE L1 -47 6188 5466 5963 156 66 9 chr5 50191449 50192612 -149437538 + Tigger3b DNA MER2_type 1 1230 -1 421 339 70 4 chr5 50192613 50192843 -149437307 - MIR SINE MIR -2 260 16 207 316 70 0 chr5 50192854 50192911 -149437239 - L2 LINE L2 -5 3267 3207 485 264 36 6 chr5 50193176 50193343 -149436807 - L1ME1 LINE L1 -2683 3532 3361 283 258 22 118 chr5 50193329 50193507 -149436643 - L1ME1 LINE L1 -6198 198 38 * 1380 175 131 0 chr5 50194590 50194887 -149435263 + MER1B DNA MER1_type 2 337 0 1926 158 57 8 chr5 50196353 50196739 -149433411 + L1MA6 LINE L1 5883 6287 -13 768 171 40 0 chr5 50196766 50196941 -149433209 + L1MA8 LINE L1 6106 6287 -4 2199 104 3 0 chr5 50196943 50197241 -149432909 + AluSp SINE Alu 1 299 -14 24 32 0 0 chr5 50197322 50197353 -149432797 + AT_rich Low_complexity Low_complexity 1 31 0 29 47 0 0 chr5 50198913 50198956 -149431194 + AT_rich Low_complexity Low_complexity 1 43 0 4240 189 46 55 chr5 50200010 50200560 -149429590 - Charlie1a DNA MER1_type -1306 1455 901 3690 145 17 0 chr5 50200560 50201153 -149428997 + LTR26 LTR ERV1 1 603 0 4240 189 46 55 chr5 50201153 50201858 -149428292 - Charlie1a DNA MER1_type -1860 901 164 414 244 118 0 chr5 50201848 50201975 -149428175 - Charlie1a DNA MER1_type -1312 143 2 * 634 329 70 0 chr5 50202454 50202697 -149427453 - MIR SINE MIR 0 262 3 436 133 133 24 chr5 50203204 50203287 -149426863 + MLT1B LTR MaLR 4 95 -295 3668 104 39 83 chr5 50203605 50204300 -149425850 - MER4A LTR ERV1 0 664 1 2052 198 24 0 chr5 50204300 50204679 -149425471 + L1M2 LINE L1 8 395 -6454 1103 159 46 102 chr5 50204679 50205053 -149425097 + L1MB8 LINE L1 5878 6162 -16 5528 40 1 3 chr5 50205330 50206007 -149424143 + L1PA5 LINE L1 5477 6152 -2 25 0 0 0 chr5 50206262 50206287 -149423863 + AT_rich Low_complexity Low_complexity 1 25 0 1970 116 0 33 chr5 50207125 50207427 -149422723 - AluSx SINE Alu -20 292 1 669 345 34 0 chr5 50208013 50208251 -149421899 + MIR SINE MIR 17 262 0 347 336 0 33 chr5 50208351 50208473 -149421677 + L2 LINE L2 3155 3272 0 223 230 115 53 chr5 50208811 50208924 -149421226 - MIR SINE MIR -70 192 73 357 277 223 5 chr5 50208938 50209144 -149421006 - MIR SINE MIR -2 260 10 32 43 0 0 chr5 50209888 50209934 -149420216 + AT_rich Low_complexity Low_complexity 1 46 0 328 325 35 0 chr5 50210248 50210362 -149419788 - MIR SINE MIR -99 163 46 294 224 0 26 chr5 50211130 50211206 -149418944 - MIR SINE MIR -3 259 186 424 144 0 113 chr5 50211210 50211307 -149418843 - L1MC4 LINE L1 -1 8041 7956 315 221 35 21 chr5 50211365 50211510 -149418640 + (TA)n Simple_repeat Simple_repeat 1 147 0 189 0 0 0 chr5 50211567 50211588 -149418562 + (TA)n Simple_repeat Simple_repeat 2 22 0 310 204 80 45 chr5 50211588 50211676 -149418474 - L1MC4 LINE L1 -1339 6703 6613 316 198 8 8 chr5 50211761 50211882 -149418268 + (TA)n Simple_repeat Simple_repeat 2 122 0 1804 271 44 17 chr5 50211979 50212613 -149417537 - L1MC4 LINE L1 -461 7581 6931 391 348 49 44 chr5 50212870 50213074 -149417076 - MIR SINE MIR -57 205 1 2351 62 0 0 chr5 50213808 50214099 -149416051 - AluY SINE Alu 0 311 21 207 100 0 0 chr5 50214972 50215002 -149415148 + (T)n Simple_repeat Simple_repeat 1 30 0 850 166 31 26 chr5 50215160 50215353 -149414797 + MER4C LTR ERV1 269 462 -3 1249 300 42 5 chr5 50215355 50215738 -149414412 - MLT1G LTR MaLR -193 397 1 267 321 97 72 chr5 50216818 50217055 -149413095 - L3 LINE CR1 -1 1576 1334 996 291 98 14 chr5 50217212 50217570 -149412580 - LTR16C LTR ERVL -2 489 102 5524 147 9 9 chr5 50218110 50219013 -149411137 - MER4D LTR ERV1 0 903 1 2218 245 40 37 chr5 50219190 50219864 -149410286 + LTR8 LTR ERV1 16 691 0 188 302 14 86 chr5 50220547 50220686 -149409464 + MER5A DNA MER1_type 61 189 0 824 181 13 13 chr5 50221040 50221195 -149408955 + MLT1D LTR MaLR 1 155 -350 555 298 63 30 chr5 50221576 50221878 -149408272 - MLT1L LTR MaLR -43 572 261 338 336 45 85 chr5 50222583 50222962 -149407188 + L2 LINE L2 2356 2706 -608 1742 130 75 39 chr5 50222962 50223324 -149406826 - THE1C LTR MaLR 0 375 1 338 336 45 85 chr5 50223324 50223506 -149406644 + L2 LINE L2 2706 2894 -420 25 0 0 0 chr5 50223696 50223721 -149406429 + AT_rich Low_complexity Low_complexity 1 25 0 2522 138 19 5 chr5 50224733 50225159 -149404991 + L1MA5A LINE L1 5858 6289 -8 279 274 0 32 chr5 50226267 50226329 -149403821 + MIR SINE MIR 16 75 -133 193 328 16 0 chr5 50226483 50226547 -149403603 + MER5B DNA MER1_type 90 154 -24 188 402 71 0 chr5 50227081 50227208 -149402942 + L2 LINE L2 3136 3271 -1 249 196 0 0 chr5 50227234 50227285 -149402865 + (CACCAT)n Simple_repeat Simple_repeat 4 54 0 413 297 34 57 chr5 50227300 50227509 -149402641 - MIR SINE MIR -56 206 3 476 289 46 112 chr5 50228114 50228373 -149401777 - MIR SINE MIR -11 251 2 376 329 85 68 chr5 50228391 50228686 -149401464 + L2 LINE L2 2932 3231 -41 276 262 0 87 chr5 50228841 50228990 -149401160 - L1MC4 LINE L1 -15 8027 7892 2105 216 92 73 chr5 50229065 50229972 -149400178 - L1MC4 LINE L1 -161 7881 6958 237 281 214 0 chr5 50230136 50230225 -149399925 - MER63A DNA MER1_type 0 210 103 23 54 0 0 chr5 50231319 50231356 -149398794 + AT_rich Low_complexity Low_complexity 1 37 0 734 60 10 0 chr5 50234716 50234816 -149395334 + (TTCC)n Simple_repeat Simple_repeat 4 104 0 527 97 0 0 chr5 50234816 50234888 -149395262 - AluS SINE Alu -241 72 1 394 244 96 15 chr5 50235624 50235759 -149394391 + MER20B DNA MER1_type 2 147 -636 294 346 44 13 chr5 50235916 50236075 -149394075 + LTR16C LTR ERVL 212 375 -116 1098 219 0 9 chr5 50236240 50236455 -149393695 - AluJb SINE Alu -13 299 87 223 289 26 0 chr5 50236895 50236971 -149393179 - L2 LINE L2 -194 3078 3001 310 305 135 7 chr5 50237260 50237401 -149392749 - L2 LINE L2 0 3313 3155 475 337 107 63 chr5 50237591 50237949 -149392201 - L2 LINE L2 -609 2705 2364 2164 108 0 41 chr5 50237949 50238263 -149391887 - AluSx SINE Alu -11 301 1 475 337 107 63 chr5 50238263 50238587 -149391563 - L2 LINE L2 -950 2364 1993 5833 93 6 11 chr5 50238705 50239520 -149390630 - HERV9 LTR ERV1 -3509 4890 4080 20563 97 11 12 chr5 50239527 50242460 -149387690 - HERV9 LTR ERV1 -5260 3139 210 3005 57 186 175 chr5 50242454 50243144 -149387006 - LTR12 LTR ERV1 -17 697 1 * 507 309 53 11 chr5 50243150 50243338 -149386812 - MIR SINE MIR -49 213 18 1441 201 25 32 chr5 50243521 50243835 -149386315 - AluJb SINE Alu 0 312 1 50 31 0 0 chr5 50244369 50244433 -149385717 + AT_rich Low_complexity Low_complexity 1 64 0 562 308 32 18 chr5 50245405 50245684 -149384466 - L1MC4a LINE L1 -1927 5881 5599 190 221 0 65 chr5 50246044 50246121 -149384029 - L2 LINE L2 -126 3187 3116 1135 316 34 12 chr5 50246184 50246602 -149383548 + LTR16A LTR ERVL 16 442 -8 858 159 8 5 chr5 50247024 50247174 -149382976 - MLT1A1 LTR MaLR 0 365 232 32 67 0 0 chr5 50248905 50248965 -149381185 + AT_rich Low_complexity Low_complexity 1 60 0 413 365 41 14 chr5 50251689 50251834 -149378316 - MER91A DNA MER1_type -44 152 4 195 409 50 15 chr5 50251849 50252047 -149378103 - L2 LINE L2 -856 2458 2254 1226 191 138 3 chr5 50252307 50252627 -149377523 + MLT1A1 LTR MaLR 3 365 0 1256 275 124 43 chr5 50253065 50253568 -149376582 + MLT1F LTR MaLR 1 593 0 2297 138 23 23 chr5 50253762 50254191 -149375959 - L1MA7 LINE L1 0 6291 5863 219 279 0 58 chr5 50254498 50254584 -149375566 + CT-rich Low_complexity Low_complexity 2 82 0 242 193 18 0 chr5 50254879 50254936 -149375214 + (CA)n Simple_repeat Simple_repeat 2 59 0 274 339 52 0 chr5 50256327 50256442 -149373708 - MIR3 SINE MIR -7 201 81 427 302 73 24 chr5 50256629 50256877 -149373273 + MIR SINE MIR 3 262 0 835 235 80 0 chr5 50258344 50258595 -149371555 + L1MCb LINE L1 813 1083 -4962 1240 142 52 9 chr5 50258599 50258831 -149371319 - MER46B DNA MER2_type -9 227 111 318 195 23 11 chr5 50258873 50258960 -149371190 + L1MCb LINE L1 1082 1169 -5395 1939 213 36 7 chr5 50258961 50259378 -149370772 - L1MB8 LINE L1 -329 5849 5421 1807 240 111 36 chr5 50259425 50260754 -149369396 + L1MCb LINE L1 1163 2616 -3948 27 73 0 0 chr5 50262637 50262692 -149367458 + AT_rich Low_complexity Low_complexity 1 55 0 297 0 0 0 chr5 50263385 50263418 -149366732 + (CA)n Simple_repeat Simple_repeat 2 34 0 33 56 0 0 chr5 50264513 50264567 -149365583 + AT_rich Low_complexity Low_complexity 1 54 0 221 364 118 27 chr5 50265555 50265929 -149364221 - L2 LINE L2 -927 2387 1980 345 115 0 0 chr5 50266349 50266401 -149363749 + MADE1 DNA Mariner 2 53 -27 23 54 0 0 chr5 50266449 50266486 -149363664 + AT_rich Low_complexity Low_complexity 1 37 0 23545 39 2 1 chr5 50266590 50270278 -149359872 - L1PA4 LINE L1 -3 6152 2463 27 0 0 0 chr5 50270509 50270536 -149359614 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr5 50270690 50270713 -149359437 + AT_rich Low_complexity Low_complexity 1 23 0 193 98 49 33 chr5 50272486 50272547 -149357603 + GA-rich Low_complexity Low_complexity 2 63 0 3374 115 22 6 chr5 50273102 50273605 -149356545 - MER9 LTR ERVK 0 511 1 14477 85 10 1 chr5 50273636 50275542 -149354608 - HERVK9 LTR ERVK -282 5634 3711 19499 92 9 9 chr5 50275542 50277509 -149352641 - HERVK9 LTR ERVK -3130 2786 760 189 228 0 88 chr5 50277509 50277566 -149352584 - MER5B DNA MER1_type -72 106 55 19499 92 9 9 chr5 50277566 50278327 -149351823 - HERVK9 LTR ERVK -5156 760 1 3615 109 0 19 chr5 50278327 50278848 -149351302 - MER9 LTR ERVK 0 511 1 242 222 95 0 chr5 50279015 50279078 -149351072 - L1MC/D LINE L1 -1896 5889 5821 1471 213 16 3 chr5 50279119 50279424 -149350726 - L1ME1 LINE L1 -332 5834 5526 200 322 62 62 chr5 50279570 50279747 -149350403 + L2 LINE L2 2844 3020 -252 272 320 144 0 chr5 50279782 50279879 -149350271 + L2 LINE L2 3203 3313 0 28 61 0 0 chr5 50280075 50280124 -149350026 + AT_rich Low_complexity Low_complexity 1 49 0 673 282 68 26 chr5 50280347 50280581 -149349569 + MIR SINE MIR 13 256 -6 691 224 36 63 chr5 50281438 50281612 -149348538 - MIR SINE MIR -2 260 94 188 381 0 0 chr5 50282980 50283043 -149347107 - L2 LINE L2 -18 3254 3192 1687 147 19 13 chr5 50284222 50284535 -149345615 + L1MA9 LINE L1 5998 6312 0 1938 128 4 4 chr5 50284793 50285143 -149345007 + AluSx SINE Alu 1 350 0 25 65 0 0 chr5 50286493 50286539 -149343611 + AT_rich Low_complexity Low_complexity 1 46 0 234 0 0 0 chr5 50288170 50288196 -149341954 + (T)n Simple_repeat Simple_repeat 1 26 0 646 227 74 34 chr5 50288908 50289084 -149341066 + MER20 DNA MER1_type 24 206 -13 610 194 122 144 chr5 50290908 50291268 -149338882 - MLT1E1 LTR MaLR -70 584 120 2716 221 70 9 chr5 50291277 50291931 -149338219 + L1MA7 LINE L1 4814 5427 -864 186 103 0 0 chr5 50291931 50291960 -149338190 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2716 221 70 9 chr5 50291960 50292508 -149337642 + L1MA7 LINE L1 5427 6104 -187 2162 95 3 27 chr5 50292521 50292816 -149337334 - AluSx SINE Alu -21 291 4 907 212 0 0 chr5 50292822 50292987 -149337163 - AluJb SINE Alu -11 301 137 236 152 0 0 chr5 50292988 50293034 -149337116 + L1MB2 LINE L1 6110 6155 -16 482 289 19 38 chr5 50293836 50293995 -149336155 + L1MEd LINE L1 481 636 -5483 2173 122 3 3 chr5 50294022 50294357 -149335793 + L1PB1 LINE L1 5816 6150 -1 206 276 92 35 chr5 50294542 50294629 -149335521 + L2 LINE L2 2195 2286 -1028 514 279 212 13 chr5 50294677 50294903 -149335247 + L2 LINE L2 2283 2553 -761 222 128 0 0 chr5 50295660 50295699 -149334451 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 2174 103 3 3 chr5 50297914 50298205 -149331945 - AluSp SINE Alu -21 292 2 219 276 81 103 chr5 50298371 50298545 -149331605 - MER5B DNA MER1_type -6 172 3 408 236 159 25 chr5 50299374 50299531 -149330619 + MER45A DNA AcHobo 1 178 0 424 310 102 58 chr5 50299679 50300201 -149329949 - MLT1L LTR MaLR -67 548 4 37 52 0 0 chr5 50300560 50300618 -149329532 + AT_rich Low_complexity Low_complexity 1 58 0 478 302 86 25 chr5 50300850 50301095 -149329055 + MIR SINE MIR 3 262 0 496 328 134 0 chr5 50301124 50301438 -149328712 - LTR33A LTR ERVL -43 480 125 21 0 0 0 chr5 50301907 50301928 -149328222 + AT_rich Low_complexity Low_complexity 1 21 0 1445 166 162 0 chr5 50302058 50302366 -149327784 - Tigger1 DNA MER2_type -6 2412 2055 489 309 140 72 chr5 50303326 50304009 -149326141 - L2 LINE L2 -2 3270 2565 198 0 0 0 chr5 50304944 50304966 -149325184 + (T)n Simple_repeat Simple_repeat 1 22 0 30 0 0 0 chr5 50305165 50305195 -149324955 + AT_rich Low_complexity Low_complexity 1 30 0 1057 188 0 18 chr5 50306707 50306930 -149323220 + AluJo SINE Alu 86 304 -8 281 140 18 0 chr5 50307127 50307184 -149322966 + (CA)n Simple_repeat Simple_repeat 1 58 0 2251 168 48 15 chr5 50307612 50308568 -149321582 - L1MA9 LINE L1 0 6312 5259 346 317 69 21 chr5 50308622 50308767 -149321383 + MIR SINE MIR 51 202 -60 22 0 0 0 chr5 50309106 50309128 -149321022 + AT_rich Low_complexity Low_complexity 1 22 0 1045 210 33 40 chr5 50309239 50309539 -149320611 + MER33 DNA MER1_type 5 302 -22 1234 251 73 98 chr5 50310294 50311452 -149318698 - L1MC5 LINE L1 -289 7672 6541 572 268 142 37 chr5 50311755 50312375 -149317775 - L1MC4a LINE L1 -1456 6352 5668 2109 136 0 0 chr5 50313449 50313759 -149316391 - AluSx SINE Alu -2 310 1 24 32 0 0 chr5 50314723 50314754 -149315396 + AT_rich Low_complexity Low_complexity 1 31 0 4318 153 32 19 chr5 50315329 50316138 -149314012 - L1MA8 LINE L1 -4 6287 5468 25 0 0 0 chr5 50316259 50316284 -149313866 + AT_rich Low_complexity Low_complexity 1 25 0 874 344 111 7 chr5 50316470 50316877 -149313273 - MLT1J LTR MaLR -62 449 1 207 313 16 16 chr5 50316947 50317011 -149313139 + MIR3 SINE MIR 10 73 -135 21 71 0 0 chr5 50317819 50317861 -149312289 + AT_rich Low_complexity Low_complexity 1 42 0 195 344 76 38 chr5 50318374 50318531 -149311619 + L2 LINE L2 2659 2821 -493 21 0 0 0 chr5 50318572 50318593 -149311557 + AT_rich Low_complexity Low_complexity 1 21 0 288 302 69 35 chr5 50318594 50318710 -149311440 - L2 LINE L2 -1 3312 3193 326 287 12 85 chr5 50318863 50319027 -149311123 + L2 LINE L2 2909 3060 -212 1069 336 41 28 chr5 50319319 50319887 -149310263 + L2 LINE L2 2453 3026 -287 248 200 33 17 chr5 50320179 50320262 -149309888 + (TCCA)n Simple_repeat Simple_repeat 1 84 0 1576 58 151 27 chr5 50320557 50320839 -149309311 - AluY SINE Alu 0 301 1 22 35 0 0 chr5 50320970 50320999 -149309151 + AT_rich Low_complexity Low_complexity 1 29 0 1277 175 73 29 chr5 50321282 50321528 -149308622 - AluJo SINE Alu -55 257 1 279 243 6 123 chr5 50323686 50323915 -149306235 + Charlie8 DNA MER1_type 129 1407 -1010 234 333 30 10 chr5 50324819 50324918 -149305232 + L2 LINE L2 3201 3301 -12 195 69 0 0 chr5 50325935 50325964 -149304186 + (A)n Simple_repeat Simple_repeat 1 29 0 2344 53 23 0 chr5 50326797 50327097 -149303053 + L1PA7 LINE L1 5845 6151 -3 1903 167 36 25 chr5 50327380 50327740 -149302410 - THE1B LTR MaLR 0 364 1 294 125 0 0 chr5 50327981 50328029 -149302121 + (TG)n Simple_repeat Simple_repeat 2 49 0 533 243 14 74 chr5 50328124 50328329 -149301821 + MIR SINE MIR 3 192 -61 22 35 0 0 chr5 50430386 50430415 -149199735 + AT_rich Low_complexity Low_complexity 1 29 0 566 315 143 0 chr5 50430842 50431045 -149199105 + MIR SINE MIR 24 255 -7 3141 226 61 15 chr5 50431178 50432110 -149198040 + L1MB8 LINE L1 5202 6176 -2 1622 232 48 6 chr5 50432223 50432576 -149197574 + MLT1H1 LTR MaLR 188 555 0 566 230 29 75 chr5 50432576 50432661 -149197489 - LTR16C LTR ERVL -67 424 349 1941 140 17 7 chr5 50432661 50432954 -149197196 + AluSx SINE Alu 1 296 -16 566 230 29 75 chr5 50432954 50433040 -149197110 - LTR16C LTR ERVL -142 349 261 2486 160 14 12 chr5 50433318 50433742 -149196408 + MSTB LTR MaLR 1 425 -1 2155 109 3 10 chr5 50434440 50434734 -149195416 - AluSp SINE Alu -19 294 3 296 179 0 0 chr5 50434824 50434891 -149195259 + L1MA7 LINE L1 6224 6290 -1 34 65 0 0 chr5 50435180 50435242 -149194908 + AT_rich Low_complexity Low_complexity 1 62 0 670 281 126 19 chr5 50435442 50435705 -149194445 - MLT1H1 LTR MaLR -235 320 30 23 0 0 0 chr5 50438749 50438772 -149191378 + AT_rich Low_complexity Low_complexity 1 23 0 333 267 107 33 chr5 50438866 50439016 -149191134 + MIR3 SINE MIR 48 208 0 22 0 0 0 chr5 50439016 50439038 -149191112 + AT_rich Low_complexity Low_complexity 1 22 0 343 333 9 0 chr5 50439273 50439378 -149190772 + GA-rich Low_complexity Low_complexity 4 109 0 1725 210 35 65 chr5 50440192 50440820 -149189330 - Charlie1a DNA MER1_type -5 1450 842 2225 191 21 13 chr5 50440820 50441287 -149188863 - L1MC1 LINE L1 0 6333 5863 1035 282 128 0 chr5 50441287 50441631 -149188519 - Charlie1a DNA MER1_type -1067 388 1 34 55 0 0 chr5 50442934 50442989 -149187161 + AT_rich Low_complexity Low_complexity 1 55 0 252 374 22 0 chr5 50444956 50445047 -149185103 + MIR SINE MIR 40 132 -76 197 354 0 0 chr5 50446849 50446931 -149183219 + L2 LINE L2 2678 2759 -555 2353 125 23 0 chr5 50446953 50447298 -149182852 + THE1B LTR MaLR 10 362 -2 218 326 50 107 chr5 50447321 50447685 -149182465 + L2 LINE L2 2791 3133 -180 24506 31 2 0 chr5 50447731 50450705 -149179445 - L1PA3 LINE L1 -1756 4390 1413 8067 31 0 0 chr5 50450705 50452445 -149177705 + L1PA3 LINE L1 4416 6155 0 189 291 0 0 chr5 50452520 50452575 -149177575 + MIR SINE MIR 178 232 -30 279 360 9 26 chr5 50452644 50452758 -149177392 + L2 LINE L2 3160 3271 -1 22 35 0 0 chr5 50454083 50454112 -149176038 + AT_rich Low_complexity Low_complexity 1 29 0 2566 104 22 7 chr5 50454785 50455189 -149174961 + L1PA8 LINE L1 5760 6169 -3 297 0 0 0 chr5 50456271 50456304 -149173846 + (TG)n Simple_repeat Simple_repeat 2 34 0 314 363 33 28 chr5 50456729 50456911 -149173239 + L2 LINE L2 3126 3308 -5 35 0 0 0 chr5 50457019 50457054 -149173096 + AT_rich Low_complexity Low_complexity 1 35 0 1798 162 175 0 chr5 50457057 50457149 -149173001 - L1MA6 LINE L1 -1 6299 6224 1668 151 167 16 chr5 50457149 50457521 -149172629 + MSTA LTR MaLR 1 428 0 1798 162 175 0 chr5 50457521 50457810 -149172340 - L1MA6 LINE L1 -76 6224 5851 1561 221 25 56 chr5 50458048 50458528 -149171622 - MLT1C LTR MaLR -2 465 1 2286 116 0 0 chr5 50459129 50459470 -149170680 - AluSg SINE Alu 0 341 1 652 233 46 50 chr5 50460101 50460320 -149169830 + Charlie8 DNA MER1_type 107 275 -2142 22 0 0 0 chr5 50462423 50462445 -149167705 + AT_rich Low_complexity Low_complexity 1 22 0 11931 196 19 103 chr5 50462538 50464277 -149165873 - L1PA15 LINE L1 0 6816 4934 219 69 0 0 chr5 50464277 50464306 -149165844 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 11931 196 19 103 chr5 50464306 50465534 -149164616 - L1PA15 LINE L1 -1882 4934 3605 2270 111 7 0 chr5 50465534 50465832 -149164318 - AluSp SINE Alu -13 300 1 11931 196 19 103 chr5 50465832 50466643 -149163507 - L1PA15 LINE L1 -3211 3605 2728 3174 116 41 4 chr5 50466643 50467126 -149163024 - MER75 DNA T2_type -13 501 1 11931 196 19 103 chr5 50467126 50468192 -149161958 - L1PA15 LINE L1 -4088 2728 2041 1822 173 0 26 chr5 50468192 50468498 -149161652 - AluJb SINE Alu -13 299 2 11931 196 19 103 chr5 50468498 50469237 -149160913 - L1PA15 LINE L1 -4775 2041 1242 3010 293 42 25 chr5 50469249 50470151 -149159999 - L1PA15 LINE L1 -5869 918 2 2417 56 0 1 chr5 50470159 50470559 -149159591 - L1P2 LINE L1 -679 5475 5077 373 0 0 0 chr5 50470558 50470599 -149159551 + L1P2 LINE L1 5530 5570 -585 * 999 220 56 70 chr5 50470599 50470940 -149159210 - MLT1E2 LTR MaLR -203 423 88 21 0 0 0 chr5 50471061 50471082 -149159068 + AT_rich Low_complexity Low_complexity 1 21 0 430 194 9 9 chr5 50471109 50471217 -149158933 + L1MB7 LINE L1 6071 6178 -6 621 325 77 13 chr5 50471379 50471613 -149158537 - MIR SINE MIR 0 262 14 26 64 0 0 chr5 50471747 50471794 -149158356 + AT_rich Low_complexity Low_complexity 1 47 0 5095 35 11 0 chr5 50471795 50472402 -149157748 - L1PA4 LINE L1 -12 6143 5530 2491 44 0 1 chr5 50472402 50472874 -149157276 + L1PA4 LINE L1 5078 5548 -606 342 331 0 15 chr5 50472874 50472899 -149157251 + MIR SINE MIR 121 145 -117 2136 169 58 60 chr5 50472899 50473367 -149156783 - MLT1C LTR MaLR 0 467 1 342 331 0 15 chr5 50473367 50473474 -149156676 + MIR SINE MIR 145 251 -11 334 335 60 27 chr5 50473864 50474049 -149156101 + MIR3 SINE MIR 3 193 -15 656 154 0 9 chr5 50474072 50474182 -149155968 + Tigger4(Zombi) DNA MER2_type 2622 2730 -1 3031 73 42 0 chr5 50474384 50474793 -149155357 - L1PA7 LINE L1 0 6154 5729 3554 65 1 12 chr5 50474793 50475321 -149154829 + L1PA7 LINE L1 5193 5715 -439 402 254 166 28 chr5 50477062 50477243 -149152907 - MIR SINE MIR -55 207 2 239 333 44 11 chr5 50477255 50477345 -149152805 + L2 LINE L2 3139 3231 -41 271 252 16 55 chr5 50478256 50478383 -149151767 - L1MC/D LINE L1 -1985 5823 5702 1310 223 31 62 chr5 50478464 50478849 -149151301 + MLT1A2 LTR MaLR 2 374 0 353 257 119 36 chr5 50478921 50479224 -149150926 - L1ME4a LINE L1 -142 5979 5652 1881 166 6 10 chr5 50479569 50479882 -149150268 + AluSx SINE Alu 1 312 0 207 274 36 48 chr5 50480065 50480149 -149150001 + MIR SINE MIR 99 181 -81 15191 49 26 1 chr5 50480238 50482170 -149147980 + L1P LINE L1 487 2466 -3680 1985 143 55 25 chr5 50482303 50482667 -149147483 + THE1C LTR MaLR 1 375 0 9623 117 30 36 chr5 50482670 50484257 -149145893 + THE1C-int LTR MaLR 4 1580 0 1625 155 73 39 chr5 50484266 50484621 -149145529 + THE1C LTR MaLR 9 375 0 246 32 0 0 chr5 50484895 50484926 -149145224 + (TG)n Simple_repeat Simple_repeat 2 32 0 347 293 131 42 chr5 50485038 50485495 -149144655 - L1M4 LINE L1 -2962 3184 2687 33 0 0 0 chr5 50485718 50485751 -149144399 + AT_rich Low_complexity Low_complexity 1 33 0 22 80 0 0 chr5 50485832 50485882 -149144268 + AT_rich Low_complexity Low_complexity 1 50 0 203 332 153 33 chr5 50485882 50486123 -149144027 + L2 LINE L2 2374 2643 -671 26 0 0 0 chr5 50486149 50486175 -149143975 + AT_rich Low_complexity Low_complexity 1 26 0 1369 256 16 11 chr5 50486183 50486546 -149143604 - MLT1A1 LTR MaLR 0 365 1 193 209 47 0 chr5 50487065 50487108 -149143042 - MIR SINE MIR 0 262 218 1497 278 28 35 chr5 50487109 50487616 -149142534 - LTR40a LTR ERVL 0 519 17 440 279 29 0 chr5 50487616 50487752 -149142398 - MIR SINE MIR -27 235 96 185 65 32 0 chr5 50488485 50488516 -149141634 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 456 303 79 46 chr5 50489088 50489329 -149140821 - MLT1K LTR MaLR -13 575 327 215 333 0 0 chr5 50490609 50490681 -149139469 - L2 LINE L2 0 3272 3201 562 259 8 0 chr5 50491016 50491147 -149139003 - MER94 DNA DNA -2 132 1 304 280 84 0 chr5 50493263 50493370 -149136780 + MIR SINE MIR 33 148 -60 214 317 10 50 chr5 50493611 50493712 -149136438 - MIR3 SINE MIR -14 194 98 241 216 23 23 chr5 50494162 50494250 -149135900 + GA-rich Low_complexity Low_complexity 2 89 0 1042 82 11 33 chr5 50494250 50494336 -149135814 + (GAAA)n Simple_repeat Simple_repeat 1 264 0 1042 82 11 33 chr5 50494336 50494520 -149135630 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 25 31 0 0 chr5 50495518 50495550 -149134600 + AT_rich Low_complexity Low_complexity 1 32 0 204 325 13 0 chr5 50496039 50496116 -149134034 - MIR SINE MIR -12 250 173 28 29 0 0 chr5 50496150 50496185 -149133965 + AT_rich Low_complexity Low_complexity 1 35 0 204 67 0 0 chr5 50496750 50496780 -149133370 + (GA)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr5 50497471 50497493 -149132657 + AT_rich Low_complexity Low_complexity 1 22 0 1875 126 0 84 chr5 50498263 50498596 -149131554 + AluSx SINE Alu 1 305 -7 31 58 0 0 chr5 50501127 50501179 -149128971 + AT_rich Low_complexity Low_complexity 1 52 0 26 30 0 0 chr5 50501201 50501234 -149128916 + AT_rich Low_complexity Low_complexity 1 33 0 184 265 98 59 chr5 50502492 50502594 -149127556 + MIR SINE MIR 40 145 -63 1909 117 0 0 chr5 50503517 50503774 -149126376 + AluSq SINE Alu 40 296 -17 24 85 0 0 chr5 50503883 50503942 -149126208 + AT_rich Low_complexity Low_complexity 1 59 0 198 71 0 0 chr5 50505171 50505199 -149124951 + (TG)n Simple_repeat Simple_repeat 1 28 0 326 303 61 0 chr5 50505458 50505590 -149124560 + L2 LINE L2 2215 2354 -960 216 344 130 17 chr5 50505702 50505932 -149124218 + L2 LINE L2 2554 2809 -505 246 20 0 80 chr5 50506600 50506650 -149123500 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 191 377 46 6 chr5 50506734 50506909 -149123241 - L2 LINE L2 -523 2791 2610 34 55 0 0 chr5 50506909 50506964 -149123186 + AT_rich Low_complexity Low_complexity 1 55 0 667 172 190 11 chr5 50507025 50507199 -149122951 + L1PBa LINE L1 1 205 -6658 303 279 64 43 chr5 50507545 50507685 -149122465 + MIR3 SINE MIR 5 147 -61 185 0 40 0 chr5 50507726 50507751 -149122399 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 201 309 82 9 chr5 50508228 50508338 -149121812 - L2 LINE L2 -848 2466 2349 654 265 50 5 chr5 50508603 50508803 -149121347 - MER3 DNA MER1_type 0 209 1 332 219 0 0 chr5 50509548 50509612 -149120538 + MER117 DNA MER1_type 56 119 -78 192 320 100 10 chr5 50510226 50510326 -149119824 - L2 LINE L2 0 3272 3164 202 268 14 56 chr5 50511937 50512008 -149118142 + L2 LINE L2 3234 3301 -12 1988 135 3 0 chr5 50513028 50513317 -149116833 - AluSc SINE Alu -19 290 1 311 257 0 27 chr5 50514293 50514367 -149115783 + L2 LINE L2 3242 3313 0 662 179 211 9 chr5 50514582 50514805 -149115345 - L1MD2 LINE L1 -2 6357 6090 25643 137 12 18 chr5 50515279 50519075 -149111075 - L1PA8A LINE L1 -28 6418 2613 186 43 0 0 chr5 50519075 50519098 -149111052 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 25643 137 12 18 chr5 50519098 50521641 -149108509 - L1PA8A LINE L1 -3833 2613 57 192 135 0 0 chr5 50521824 50521861 -149108289 + (CA)n Simple_repeat Simple_repeat 2 38 0 2405 81 0 0 chr5 50522300 50522597 -149107553 + AluY SINE Alu 1 297 -14 21 36 0 0 chr5 50522872 50522900 -149107250 + AT_rich Low_complexity Low_complexity 1 28 0 315 71 0 0 chr5 50523023 50523065 -149107085 + (CA)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr5 50523161 50523182 -149106968 + AT_rich Low_complexity Low_complexity 1 21 0 376 292 41 97 chr5 50523671 50523899 -149106251 + L1MEd LINE L1 730 926 -5193 2374 222 54 29 chr5 50523899 50524489 -149105661 - MER77 LTR ERV1 0 605 1 376 292 41 97 chr5 50524489 50524674 -149105476 + L1MEd LINE L1 926 1120 -4999 205 333 0 0 chr5 50525006 50525075 -149105075 + MIR SINE MIR 92 160 -102 369 323 39 20 chr5 50525886 50526242 -149103908 + L1MEd LINE L1 2249 2611 -3518 391 174 256 0 chr5 50526270 50526356 -149103794 + AluJb SINE Alu 1 108 -194 483 304 141 14 chr5 50526375 50526512 -149103638 - MER20B DNA MER1_type -368 415 297 772 194 67 22 chr5 50526512 50526692 -149103458 - MER5A DNA MER1_type 0 189 2 483 304 141 14 chr5 50526692 50526837 -149103313 - MER20B DNA MER1_type -486 297 97 * 530 260 206 10 chr5 50526834 50527038 -149103112 - MLT1H1 LTR MaLR -311 244 1 266 283 9 66 chr5 50527244 50527350 -149102800 - MLT1A2-int LTR MaLR -238 1133 1034 814 196 53 72 chr5 50527370 50527635 -149102515 + MLT1A1 LTR MaLR 1 260 -105 228 250 4 42 chr5 50528109 50528201 -149101949 - MLT1A2-int LTR MaLR -1280 91 2 326 345 154 26 chr5 50528252 50528519 -149101631 - MLT1H1 LTR MaLR -207 348 48 1592 157 32 21 chr5 50528535 50528815 -149101335 - AluJb SINE Alu -29 283 1 238 225 0 0 chr5 50528815 50528855 -149101295 - MLT1H1 LTR MaLR -495 60 21 441 303 162 25 chr5 50531840 50532038 -149098112 - MIR SINE MIR -36 226 2 666 201 41 42 chr5 50532529 50532715 -149097435 + MER5B DNA MER1_type 1 189 0 260 291 188 0 chr5 50533039 50533156 -149096994 + MIR SINE MIR 84 222 -40 214 429 7 21 chr5 50535441 50535581 -149094569 - MIR3 SINE MIR -48 160 23 8981 37 13 1 chr5 50535771 50537515 -149092635 + L1PA16 LINE L1 4328 6153 -2 2211 117 0 3 chr5 50537946 50538253 -149091897 + AluSg SINE Alu 1 306 -4 1353 256 38 11 chr5 50538280 50538627 -149091523 - MLT1A2 LTR MaLR 0 374 19 23 33 0 0 chr5 50538939 50538969 -149091181 + AT_rich Low_complexity Low_complexity 1 30 0 2028 181 37 76 chr5 50540573 50541113 -149089037 + LTR53 LTR ERVL 1 519 0 25 0 0 0 chr5 50541228 50541253 -149088897 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 50541342 50541366 -149088784 + AT_rich Low_complexity Low_complexity 1 24 0 2797 138 8 36 chr5 50545262 50545732 -149084418 - LTR32 LTR ERVL 0 471 15 571 230 17 73 chr5 50545874 50546052 -149084098 + MER20 DNA MER1_type 52 219 0 532 301 0 0 chr5 50546220 50546353 -149083797 - L2 LINE L2 0 3272 3140 291 288 63 9 chr5 50546566 50546677 -149083473 - L2 LINE L2 -208 3064 2948 275 319 28 62 chr5 50547883 50548027 -149082123 - L2 LINE L2 0 3272 3134 478 309 62 31 chr5 50548670 50548929 -149081221 + L2 LINE L2 3041 3307 -6 314 309 146 34 chr5 50549047 50549225 -149080925 + MIR SINE MIR 4 201 -61 728 313 122 47 chr5 50549598 50550214 -149079936 - L3 LINE CR1 -45 1532 871 240 263 13 40 chr5 50550605 50550681 -149079469 + Charlie4 DNA MER1_type 1888 1961 0 263 320 40 20 chr5 50550709 50550809 -149079341 - MIR3 SINE MIR -97 111 10 210 200 0 20 chr5 50550847 50550897 -149079253 + (TA)n Simple_repeat Simple_repeat 2 50 0 7037 51 3 10 chr5 50551507 50552464 -149077686 + L1PA6 LINE L1 5204 6154 0 328 399 6 24 chr5 50552496 50552664 -149077486 - MIR3 SINE MIR 0 208 44 236 305 8 55 chr5 50552912 50553040 -149077110 - MIR3 SINE MIR -2 206 85 7360 214 43 31 chr5 50553341 50555045 -149075105 - L1MC1 LINE L1 -9 6324 4570 2241 113 3 0 chr5 50555045 50555346 -149074804 + AluSx SINE Alu 1 302 -10 7360 214 43 31 chr5 50555346 50556880 -149073270 - L1MC1 LINE L1 -1763 4570 3056 699 137 0 0 chr5 50556880 50557004 -149073146 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 382 206 0 0 chr5 50557006 50557074 -149073076 - AluJ/FRAM SINE Alu -5 297 230 37406 38 2 5 chr5 50557075 50562505 -149067645 + L1PA4 LINE L1 741 6155 0 618 181 8 16 chr5 50563089 50563216 -149066934 + MER105 DNA DNA 37 162 -42 187 286 143 55 chr5 50563308 50563381 -149066769 + L2 LINE L2 3174 3258 -14 2113 97 45 3 chr5 50563381 50563671 -149066479 + AluSx SINE Alu 1 302 -10 187 286 143 55 chr5 50563671 50563688 -149066462 + L2 LINE L2 3258 3272 0 185 368 50 22 chr5 50565064 50565246 -149064904 + MIR3 SINE MIR 5 191 -17 258 260 0 0 chr5 50566770 50566820 -149063330 - MIR SINE MIR -192 70 21 309 329 72 18 chr5 50567086 50567253 -149062897 - MIR SINE MIR -70 192 17 241 368 57 0 chr5 50567358 50567464 -149062686 + MIR SINE MIR 31 142 -66 395 248 43 43 chr5 50567609 50567750 -149062400 + L2 LINE L2 3173 3313 0 180 111 0 0 chr5 50568168 50568195 -149061955 + (T)n Simple_repeat Simple_repeat 1 27 0 1600 62 0 5 chr5 50568211 50568404 -149061746 - AluY SINE Alu -83 228 37 1937 156 26 34 chr5 50568522 50568900 -149061250 + THE1C LTR MaLR 1 375 0 10458 112 28 15 chr5 50568900 50570460 -149059690 + THE1C-int LTR MaLR 1 1580 0 1160 153 29 37 chr5 50570584 50570826 -149059324 + THE1C LTR MaLR 136 375 0 663 198 25 0 chr5 50571056 50571177 -149058973 - FLAM_A SINE Alu -8 125 2 33 0 0 0 chr5 50571231 50571264 -149058886 + AT_rich Low_complexity Low_complexity 1 33 0 357 24 0 0 chr5 50571931 50571973 -149058177 + (TG)n Simple_repeat Simple_repeat 1 42 0 2238 131 0 0 chr5 50572566 50572878 -149057272 - AluSx SINE Alu 0 312 1 24 0 0 0 chr5 50573084 50573108 -149057042 + AT_rich Low_complexity Low_complexity 1 24 0 355 319 33 33 chr5 50573965 50574147 -149056003 - MER5A DNA MER1_type -7 182 1 21 0 0 0 chr5 50574179 50574200 -149055950 + AT_rich Low_complexity Low_complexity 1 21 0 7652 24 0 0 chr5 50574203 50575180 -149054970 - L1PA3 LINE L1 -3 6152 5178 738 21 11 0 chr5 50575180 50575273 -149054877 + L1PA3 LINE L1 5083 5176 -970 25 31 0 0 chr5 50576152 50576184 -149053966 + AT_rich Low_complexity Low_complexity 1 32 0 193 279 162 0 chr5 50577929 50577997 -149052153 - L2 LINE L2 -1061 2253 2175 326 42 21 0 chr5 50578445 50578493 -149051657 + (CA)n Simple_repeat Simple_repeat 2 50 0 251 333 29 0 chr5 50578597 50578699 -149051451 - MIR3 SINE MIR -22 186 82 433 297 66 73 chr5 50578895 50579154 -149050996 - MIR SINE MIR 0 262 6 263 307 84 109 chr5 50579920 50580408 -149049742 + L2 LINE L2 2705 3179 -93 371 305 24 66 chr5 50581656 50581869 -149048281 + HAL1 LINE L1 155 358 -2149 605 246 99 53 chr5 50581895 50582330 -149047820 + HAL1 LINE L1 2036 2490 -17 212 311 28 47 chr5 50582600 50582706 -149047444 + L2 LINE L2 3155 3258 -14 427 149 115 0 chr5 50583225 50583312 -149046838 - MLT1C LTR MaLR 0 467 371 1028 127 16 9 chr5 50583312 50583593 -149046557 - THE1B LTR MaLR 0 364 1 2150 147 11 17 chr5 50583593 50583836 -149046314 - MLT1C LTR MaLR -92 375 133 3212 83 9 9 chr5 50583836 50584280 -149045870 - MLT2A1 LTR ERVL 0 444 1 2150 147 11 17 chr5 50584280 50584397 -149045753 - MLT1C LTR MaLR -334 133 17 261 276 138 24 chr5 50585274 50585397 -149044753 + MARNA DNA Mariner 57 193 -393 4358 199 20 9 chr5 50586358 50588046 -149042104 + L1MB7 LINE L1 4458 6165 -19 306 250 83 0 chr5 50588722 50588818 -149041332 - LTR16A LTR ERVL -12 438 335 286 140 40 0 chr5 50589679 50589729 -149040421 + MADE1 DNA Mariner 1 52 -28 264 77 0 0 chr5 50589945 50589984 -149040166 + (TG)n Simple_repeat Simple_repeat 2 40 0 295 297 81 18 chr5 50590069 50590180 -149039970 - MIR SINE MIR -115 147 30 1309 163 76 116 chr5 50590238 50590618 -149039532 - MLT1A1 LTR MaLR 0 365 1 184 261 277 17 chr5 50591507 50591626 -149038524 - L2 LINE L2 -6 3307 3158 302 339 41 8 chr5 50591826 50591947 -149038203 + L2 LINE L2 3180 3304 -9 252 273 102 31 chr5 50592458 50592586 -149037564 - L2 LINE L2 -1405 1909 1773 251 54 27 0 chr5 50592683 50592720 -149037430 + (CA)n Simple_repeat Simple_repeat 2 39 0 378 42 0 0 chr5 50593252 50593300 -149036850 + (TG)n Simple_repeat Simple_repeat 2 49 0 668 296 100 54 chr5 50593445 50593557 -149036593 + L1MEd LINE L1 778 883 -1607 197 65 32 0 chr5 50593557 50593588 -149036562 + (TAGA)n Simple_repeat Simple_repeat 3 34 0 668 296 100 54 chr5 50593588 50594184 -149035966 + L1MEd LINE L1 883 1639 -851 347 209 9 0 chr5 50594184 50594294 -149035856 + (CA)n Simple_repeat Simple_repeat 2 112 0 2050 125 7 0 chr5 50594429 50594732 -149035418 + AluSp SINE Alu 1 305 -8 281 230 0 68 chr5 50595740 50595814 -149034336 - MER115 DNA AcHobo -624 69 1 2224 89 3 0 chr5 50597032 50597314 -149032836 + AluSp SINE Alu 11 293 -20 221 83 28 0 chr5 50598279 50598315 -149031835 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1002 194 15 10 chr5 50598469 50598670 -149031480 + MER3 DNA MER1_type 3 204 -5 673 289 47 9 chr5 50599273 50599484 -149030666 + L2 LINE L2 2449 2667 -647 2591 107 6 3 chr5 50599572 50599935 -149030215 + THE1B LTR MaLR 1 364 0 704 197 0 0 chr5 50600112 50600234 -149029916 + AluJo SINE Alu 1 122 -190 944 277 122 26 chr5 50600257 50600507 -149029643 + L2 LINE L2 2695 2920 -393 1475 223 18 47 chr5 50600507 50600889 -149029261 + MLT1A2 LTR MaLR 4 374 0 944 277 122 26 chr5 50600889 50601190 -149028960 + L2 LINE L2 2920 3295 -18 1676 65 0 0 chr5 50601416 50601630 -149028520 + L1PA5 LINE L1 5934 6147 -7 2142 127 39 30 chr5 50601957 50602318 -149027832 + THE1B LTR MaLR 1 364 0 255 286 65 0 chr5 50602611 50602688 -149027462 - MIR3 SINE MIR -48 160 79 214 174 0 0 chr5 50602938 50602984 -149027166 + (TA)n Simple_repeat Simple_repeat 1 46 0 242 222 111 0 chr5 50602991 50603072 -149027078 + L1MC4 LINE L1 6614 6703 -1339 216 0 0 0 chr5 50603072 50603096 -149027054 + (TA)n Simple_repeat Simple_repeat 2 25 0 1487 260 91 2 chr5 50603111 50603542 -149026608 - MLT2B1 LTR ERVL -51 469 1 370 296 76 48 chr5 50603806 50604163 -149025987 + Charlie8 DNA MER1_type 151 278 -2139 28 48 0 0 chr5 50604592 50604634 -149025516 + AT_rich Low_complexity Low_complexity 1 42 0 889 218 6 0 chr5 50604715 50604889 -149025261 + AluJo SINE Alu 125 299 -13 27 62 0 0 chr5 50604967 50605015 -149025135 + AT_rich Low_complexity Low_complexity 1 48 0 1988 204 63 73 chr5 50605100 50605658 -149024492 - MLT2B3 LTR ERVL -2 552 1 1030 209 125 52 chr5 50605905 50606274 -149023876 - MSTD LTR MaLR 0 396 1 26 0 0 0 chr5 50606327 50606353 -149023797 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr5 50607480 50607505 -149022645 + AT_rich Low_complexity Low_complexity 1 25 0 2036 119 34 0 chr5 50607508 50607803 -149022347 - AluSx SINE Alu -7 305 1 2330 57 0 0 chr5 50608212 50608543 -149021607 + AluY SINE Alu 1 331 0 192 380 0 13 chr5 50609073 50609152 -149020998 + L2 LINE L2 3000 3077 -195 344 288 87 85 chr5 50609187 50609463 -149020687 + L1ME4a LINE L1 5683 5962 -159 906 189 0 18 chr5 50609463 50609627 -149020523 - FRAM SINE Alu -5 161 1 344 288 87 85 chr5 50609627 50609739 -149020411 + L1ME4a LINE L1 5962 6072 -49 195 42 0 0 chr5 50610460 50610484 -149019666 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 412 298 180 41 chr5 50611094 50611389 -149018761 + L2 LINE L2 2978 3313 0 190 321 0 0 chr5 50612373 50612426 -149017724 + L2 LINE L2 3261 3313 0 1520 138 0 0 chr5 50613297 50613522 -149016628 + AluSg/x SINE Alu 85 309 -3 640 260 127 83 chr5 50614604 50615038 -149015112 + LTR33 LTR ERVL 4 456 -65 195 186 0 0 chr5 50615110 50615153 -149014997 + (CATA)n Simple_repeat Simple_repeat 2 44 0 180 0 0 0 chr5 50616605 50616625 -149013525 + (TG)n Simple_repeat Simple_repeat 2 21 0 2870 250 54 85 chr5 50617093 50618292 -149011858 - L1M4 LINE L1 -5365 1177 16 23 0 0 0 chr5 50618554 50618577 -149011573 + AT_rich Low_complexity Low_complexity 1 23 0 1534 203 6 22 chr5 50618588 50618903 -149011247 - AluJo SINE Alu 0 312 3 2346 85 0 0 chr5 50619107 50619400 -149010750 - AluY SINE Alu -18 293 1 33 25 0 0 chr5 50620979 50621019 -149009131 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr5 50623025 50623047 -149007103 + AT_rich Low_complexity Low_complexity 1 22 0 231 61 0 0 chr5 50623213 50623246 -149006904 + (A)n Simple_repeat Simple_repeat 1 33 0 657 292 23 42 chr5 50623546 50623806 -149006344 - MIR SINE MIR 0 262 8 2140 125 66 0 chr5 50623961 50624280 -149005870 - MER1A DNA MER1_type 0 529 190 180 352 57 11 chr5 50624346 50624434 -149005716 + MIR SINE MIR 23 114 -148 26 30 0 0 chr5 50624730 50624763 -149005387 + AT_rich Low_complexity Low_complexity 1 33 0 197 156 0 22 chr5 50624898 50624943 -149005207 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 237 265 24 24 chr5 50626057 50626140 -149004010 + CT-rich Low_complexity Low_complexity 6 88 0 2407 162 63 29 chr5 50628948 50629436 -149000714 - MLT1D LTR MaLR 0 505 1 644 242 119 98 chr5 50629754 50630142 -149000008 - LTR33 LTR ERVL 0 521 126 297 146 0 18 chr5 50630222 50630277 -148999873 - MIR SINE MIR -27 235 182 409 129 29 0 chr5 50630292 50630362 -148999788 + HY3 scRNA scRNA 29 100 -1 286 322 60 40 chr5 50630395 50630544 -148999606 - MIR SINE MIR -109 153 2 186 359 16 0 chr5 50631765 50631829 -148998321 + L2 LINE L2 3116 3180 -92 660 214 23 35 chr5 50632006 50632179 -148997971 - MER104 DNA Tc2 -9 171 1 324 0 0 0 chr5 50633099 50633135 -148997015 + (CA)n Simple_repeat Simple_repeat 2 37 0 301 325 60 26 chr5 50634711 50634862 -148995288 - MIR3 SINE MIR -45 163 8 318 337 166 12 chr5 50636268 50636431 -148993719 + MIR SINE MIR 1 188 -74 1666 167 105 45 chr5 50637048 50637607 -148992543 - MER4A LTR ERV1 -9 456 1 212 274 104 57 chr5 50641181 50641287 -148988863 - MIR SINE MIR -151 111 1 26 0 0 0 chr5 50641525 50641551 -148988599 + AT_rich Low_complexity Low_complexity 1 26 0 438 303 74 0 chr5 50642131 50642293 -148987857 + MER5B DNA MER1_type 5 178 0 331 301 224 0 chr5 50642312 50642455 -148987695 + MER5A DNA MER1_type 12 186 -3 221 360 94 57 chr5 50643723 50644181 -148985969 - L2 LINE L2 -417 2897 2423 313 328 92 11 chr5 50645897 50646071 -148984079 - MIR SINE MIR -4 258 71 22 0 0 0 chr5 50646160 50646182 -148983968 + AT_rich Low_complexity Low_complexity 1 22 0 327 130 0 0 chr5 50647247 50647301 -148982849 + (T)n Simple_repeat Simple_repeat 1 54 0 406 242 92 42 chr5 50647348 50647468 -148982682 - MIR3 SINE MIR 0 208 83 409 297 83 44 chr5 50647766 50647995 -148982155 - L2 LINE L2 -1 3271 3034 1996 120 13 7 chr5 50648102 50648402 -148981748 - AluSx SINE Alu -10 302 1 330 239 67 67 chr5 50649839 50649973 -148980177 + MIR3 SINE MIR 61 194 -14 605 208 82 19 chr5 50650473 50650632 -148979518 + MER5B DNA MER1_type 7 175 -3 390 305 80 65 chr5 50651144 50651344 -148978806 + MIR SINE MIR 14 216 -46 252 0 0 0 chr5 50651389 50651417 -148978733 + (T)n Simple_repeat Simple_repeat 1 28 0 21 36 0 0 chr5 50651611 50651639 -148978511 + AT_rich Low_complexity Low_complexity 1 28 0 218 255 0 0 chr5 50652558 50652609 -148977541 + MIR SINE MIR 30 80 -182 1794 151 34 0 chr5 50652739 50653030 -148977120 - AluSx SINE Alu -5 307 7 459 150 130 0 chr5 50653950 50654050 -148976100 + MER53 DNA DNA 77 189 0 185 283 268 5 chr5 50654584 50654789 -148975361 + MIR SINE MIR 1 259 -3 237 276 127 11 chr5 50655835 50655963 -148974187 + MIR3 SINE MIR 5 149 -82 743 255 4 64 chr5 50656444 50656679 -148973471 - MER58A DNA MER1_type 0 224 4 234 167 42 0 chr5 50657499 50657554 -148972596 - MLT1I LTR MaLR -34 412 316 6163 33 1 0 chr5 50657668 50658765 -148971385 - L1P2 LINE L1 -420 5735 4637 3270 24 0 0 chr5 50658765 50659138 -148971012 + L1PA4 LINE L1 5775 6154 -1 227 385 26 8 chr5 50660763 50660880 -148969270 - MIR SINE MIR -56 206 88 315 307 31 88 chr5 50661412 50661604 -148968546 + MIR3 SINE MIR 20 200 -8 2105 121 0 10 chr5 50661805 50662103 -148968047 - AluSx SINE Alu -12 300 6 22 70 0 0 chr5 50662707 50662750 -148967400 + AT_rich Low_complexity Low_complexity 1 43 0 2058 147 3 0 chr5 50662887 50663193 -148966957 - AluSx SINE Alu -5 307 1 439 198 0 0 chr5 50663391 50663482 -148966668 + L1MD1 LINE L1 6147 6237 -5 4077 186 18 34 chr5 50663546 50663885 -148966265 - L1MB5 LINE L1 -14 6160 5817 13856 117 50 37 chr5 50663885 50664240 -148965910 + Tigger1 DNA MER2_type 2 351 -2067 2147 128 7 0 chr5 50664240 50664546 -148965604 + AluSg SINE Alu 1 308 -2 13856 117 50 37 chr5 50664546 50666577 -148963573 + Tigger1 DNA MER2_type 351 2418 0 4077 186 18 34 chr5 50666577 50667128 -148963022 - L1MB5 LINE L1 -357 5817 5284 266 150 133 0 chr5 50667182 50667242 -148962908 + L1ME3A LINE L1 6052 6119 -51 1650 181 30 93 chr5 50667280 50667773 -148962377 - MLT1C LTR MaLR 0 467 6 765 186 8 0 chr5 50667846 50667970 -148962180 + AluSq/x SINE Alu 1 125 -188 2224 108 3 3 chr5 50669737 50670034 -148960116 - AluSx SINE Alu -15 297 1 228 374 26 17 chr5 50670285 50670400 -148959750 + L2 LINE L2 3153 3268 -4 229 260 0 82 chr5 50671049 50671122 -148959028 + MIR3 SINE MIR 133 199 -9 462 18 0 0 chr5 50671370 50671425 -148958725 + (TG)n Simple_repeat Simple_repeat 2 56 0 2019 159 0 0 chr5 50671524 50671819 -148958331 + AluSx SINE Alu 1 295 -17 862 232 25 15 chr5 50672834 50673032 -148957118 - MLT1B LTR MaLR 0 390 191 344 198 0 12 chr5 50673040 50673126 -148957024 + GA-rich Low_complexity Low_complexity 1 85 0 222 251 29 35 chr5 50673126 50673297 -148956853 + (TAG)n Simple_repeat Simple_repeat 1 170 0 * 306 112 45 82 chr5 50673210 50673344 -148956806 + (TATAG)n Simple_repeat Simple_repeat 2 130 0 339 176 33 11 chr5 50673347 50673438 -148956712 + GA-rich Low_complexity Low_complexity 2 94 0 643 219 69 12 chr5 50673452 50673612 -148956538 - MLT1B LTR MaLR -217 173 5 1733 190 0 0 chr5 50677516 50677832 -148952318 + AluJb SINE Alu 1 316 0 23 0 0 0 chr5 50678738 50678761 -148951389 + AT_rich Low_complexity Low_complexity 1 23 0 245 163 41 20 chr5 50681315 50681364 -148948786 - MIR SINE MIR -63 145 96 2172 115 0 20 chr5 50681387 50681691 -148948459 - AluSx SINE Alu -14 298 1 207 0 0 0 chr5 50682403 50682426 -148947724 + (TTTTTA)n Simple_repeat Simple_repeat 5 27 0 368 350 17 0 chr5 50682468 50682588 -148947562 + MIR SINE MIR 31 152 -56 180 111 0 0 chr5 50682631 50682658 -148947492 + (TTA)n Simple_repeat Simple_repeat 3 29 0 318 339 16 8 chr5 50683196 50683317 -148946833 + MIR SINE MIR 81 202 -60 366 262 12 0 chr5 50684138 50684222 -148945928 - MER5A DNA MER1_type -86 103 19 954 203 53 0 chr5 50684292 50684499 -148945651 + MER20 DNA MER1_type 2 219 0 1759 195 20 12 chr5 50684609 50684818 -148945332 - MER7A DNA MER2_type -2692 346 133 1856 167 0 7 chr5 50684818 50685118 -148945032 + AluSx SINE Alu 1 298 -14 1759 195 20 12 chr5 50685118 50685252 -148944898 - MER7A DNA MER2_type -2905 133 2 401 252 114 8 chr5 50685252 50685375 -148944775 + L3b LINE CR1 1205 1340 -243 212 0 0 35 chr5 50686244 50686273 -148943877 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1783 139 22 8 chr5 50686277 50686544 -148943606 - AluSx SINE Alu -37 275 5 257 330 11 0 chr5 50686726 50686817 -148943333 - MIR SINE MIR 0 262 171 21 36 0 0 chr5 50687255 50687283 -148942867 + AT_rich Low_complexity Low_complexity 1 28 0 5023 40 0 0 chr5 50687283 50687882 -148942268 - L1PA5 LINE L1 -6 6148 5550 2295 101 3 0 chr5 50688424 50688721 -148941429 - AluSg SINE Alu -12 298 1 200 378 0 11 chr5 50690254 50690344 -148939806 - L2 LINE L2 -2 3311 3223 421 284 14 35 chr5 50790543 50790684 -148839466 + L2 LINE L2 2715 2852 -462 185 329 14 29 chr5 50790849 50790919 -148839231 + L2 LINE L2 3229 3297 -16 815 295 62 4 chr5 50791152 50791379 -148838771 - MIR SINE MIR 0 262 23 346 214 0 0 chr5 50791391 50791461 -148838689 + MIR SINE MIR 179 248 -14 386 320 6 17 chr5 50791679 50791851 -148838299 - L1ME LINE L1 -401 5720 5551 1350 310 60 93 chr5 50791910 50792621 -148837529 - L3 LINE CR1 -245 1332 662 2454 87 0 0 chr5 50792621 50792930 -148837220 + AluSc SINE Alu 1 309 0 1350 310 60 93 chr5 50792930 50793232 -148836918 - L3 LINE CR1 -915 662 352 245 275 0 22 chr5 50793522 50793613 -148836537 - L1MC4 LINE L1 -1339 6703 6615 1913 167 3 0 chr5 50793944 50794243 -148835907 + AluJo SINE Alu 1 300 -12 1257 85 6 23 chr5 50794289 50794466 -148835684 + AluSp SINE Alu 1 174 -139 21 0 0 0 chr5 50794893 50794914 -148835236 + AT_rich Low_complexity Low_complexity 1 21 0 1543 244 61 80 chr5 50795089 50795936 -148834214 - L1ME LINE L1 -5228 842 12 1903 172 0 6 chr5 50798239 50798553 -148831597 - AluSx SINE Alu 0 312 1 206 286 0 43 chr5 50799836 50799906 -148830244 + CT-rich Low_complexity Low_complexity 3 69 0 421 281 107 39 chr5 50799920 50800098 -148830052 - MIR3 SINE MIR -4 204 15 348 311 25 0 chr5 50801136 50801258 -148828892 - L2 LINE L2 0 3272 3148 378 256 16 85 chr5 50801308 50801396 -148828754 + MER5A DNA MER1_type 70 148 -41 2146 136 0 0 chr5 50801396 50801704 -148828446 - AluSp SINE Alu -5 308 1 378 256 16 85 chr5 50801704 50801744 -148828406 + MER5A DNA MER1_type 148 189 0 212 293 60 87 chr5 50801779 50801929 -148828221 + L2 LINE L2 3165 3310 -3 21 36 0 0 chr5 50802005 50802033 -148828117 + AT_rich Low_complexity Low_complexity 1 28 0 213 136 0 23 chr5 50802425 50802469 -148827681 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 301 224 0 59 chr5 50803430 50803515 -148826635 + MER116 DNA Mariner 1 80 0 211 294 0 0 chr5 50803846 50803897 -148826253 + GA-rich Low_complexity Low_complexity 2 52 0 548 42 0 0 chr5 50804863 50804934 -148825216 - AluSg/x SINE Alu -74 236 166 25 0 0 0 chr5 50806187 50806212 -148823938 + AT_rich Low_complexity Low_complexity 1 25 0 263 233 0 0 chr5 50806254 50806314 -148823836 - MSTB2 LTR MaLR -5 452 393 807 228 180 27 chr5 50806427 50806721 -148823429 - MSTB2 LTR MaLR -118 339 1 326 227 13 0 chr5 50807447 50807522 -148822628 - MER103 DNA DNA -90 76 1 278 71 24 0 chr5 50808632 50808674 -148821476 + MADE1 DNA Mariner 2 44 -36 21 0 0 0 chr5 50810619 50810640 -148819510 + AT_rich Low_complexity Low_complexity 1 21 0 205 222 0 37 chr5 50811407 50811461 -148818689 + GA-rich Low_complexity Low_complexity 3 54 0 208 299 124 102 chr5 50811546 50811958 -148818192 + L2 LINE L2 2804 3224 -48 2379 76 0 10 chr5 50814569 50814870 -148815280 + AluSq SINE Alu 1 298 -15 887 192 174 5 chr5 50814898 50815122 -148815028 - MER31A LTR ERV1 -9 476 215 2149 255 148 12 chr5 50815136 50815870 -148814280 - MER21B LTR ERV1 -11 852 19 367 220 10 90 chr5 50815870 50815970 -148814180 - MER21B LTR ERV1 -759 104 13 1136 218 7 98 chr5 50815976 50816384 -148813766 - MER93b LTR ERV1 0 373 3 930 238 0 0 chr5 50816418 50816603 -148813547 - MER31B LTR ERV1 -281 185 1 272 258 43 21 chr5 50816619 50816712 -148813438 - L1MC4 LINE L1 -21 8021 7927 2065 52 4 19 chr5 50817177 50817444 -148812706 - AluY SINE Alu -8 303 41 320 288 72 0 chr5 50818483 50818594 -148811556 + L2 LINE L2 3186 3304 -9 222 218 34 34 chr5 50818594 50818741 -148811409 + GA-rich Low_complexity Low_complexity 4 150 0 2194 109 0 3 chr5 50819516 50819809 -148810341 - AluSx SINE Alu -20 292 1 23 0 0 0 chr5 50820471 50820494 -148809656 + AT_rich Low_complexity Low_complexity 1 23 0 730 209 91 144 chr5 50820808 50820999 -148809151 - L1ME2 LINE L1 -1 6163 5964 3651 154 11 9 chr5 50820999 50821660 -148808490 - L1MA4 LINE L1 -6 6294 5633 730 209 91 144 chr5 50821660 50821962 -148808188 - L1ME2 LINE L1 -200 5964 5696 189 0 0 0 chr5 50821964 50821985 -148808165 + (A)n Simple_repeat Simple_repeat 1 21 0 25 31 0 0 chr5 50822057 50822089 -148808061 + AT_rich Low_complexity Low_complexity 1 32 0 3724 202 37 34 chr5 50822308 50823319 -148806831 + L1ME1 LINE L1 5159 6334 0 331 315 45 0 chr5 50827650 50827761 -148802389 - L2 LINE L2 -2 3270 3155 457 316 86 72 chr5 50827918 50828323 -148801827 + L3 LINE CR1 885 1295 -282 217 345 190 14 chr5 50828335 50828477 -148801673 - MIR3 SINE MIR -17 191 25 284 328 156 0 chr5 50828533 50828713 -148801437 - L2 LINE L2 -22 3291 3084 196 343 14 29 chr5 50828691 50828761 -148801389 + L3b LINE CR1 1507 1575 -8 * 504 261 43 36 chr5 50828868 50829144 -148801006 + L1ME LINE L1 5545 5822 -299 553 303 99 5 chr5 50829223 50829433 -148800717 + MIR SINE MIR 36 262 0 1758 219 57 25 chr5 50829505 50829994 -148800156 + MLT1D LTR MaLR 1 505 0 2298 108 0 3 chr5 50831109 50831423 -148798727 - AluSq SINE Alu 0 313 1 255 31 0 0 chr5 50831831 50831863 -148798287 + (CA)n Simple_repeat Simple_repeat 2 33 0 283 345 34 8 chr5 50832342 50832461 -148797689 - L3 LINE CR1 -175 1402 1281 2478 54 3 0 chr5 50833196 50833490 -148796660 + AluY SINE Alu 3 297 -14 370 303 86 73 chr5 50833506 50833889 -148796261 + L1ME LINE L1 5379 5766 -355 238 349 19 9 chr5 50834932 50835038 -148795112 - L2 LINE L2 -456 2858 2752 336 208 14 0 chr5 50836392 50836464 -148793686 - Charlie8 DNA MER1_type -2201 216 144 21 36 0 0 chr5 50838132 50838160 -148791990 + AT_rich Low_complexity Low_complexity 1 28 0 323 231 8 60 chr5 50839195 50839312 -148790838 + L1MC4 LINE L1 6611 6721 -1321 487 93 3 93 chr5 50839388 50839778 -148790372 + (TA)n Simple_repeat Simple_repeat 1 354 0 461 113 9 82 chr5 50839799 50840868 -148789282 + (TA)n Simple_repeat Simple_repeat 1 991 0 274 152 28 65 chr5 50840891 50841178 -148788972 + (TA)n Simple_repeat Simple_repeat 1 305 -12 270 0 0 0 chr5 50841178 50841208 -148788942 + (TG)n Simple_repeat Simple_repeat 2 31 0 274 152 28 65 chr5 50841208 50841221 -148788929 + (TA)n Simple_repeat Simple_repeat 305 317 0 2323 79 0 0 chr5 50841221 50841512 -148788638 - AluY SINE Alu -20 291 1 1868 71 8 4 chr5 50842824 50843062 -148787088 + AluSg SINE Alu 2 240 -70 22 35 0 0 chr5 50844589 50844618 -148785532 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr5 50844745 50844789 -148785361 + AT_rich Low_complexity Low_complexity 1 44 0 353 235 75 132 chr5 50845712 50846335 -148783815 + HAL1b LINE L1 1228 1348 0 356 315 92 22 chr5 50846555 50846739 -148783411 + MIR SINE MIR 28 224 -38 27 81 0 0 chr5 50848339 50848401 -148781749 + AT_rich Low_complexity Low_complexity 1 62 0 21 0 0 0 chr5 50849453 50849474 -148780676 + AT_rich Low_complexity Low_complexity 1 21 0 436 304 53 18 chr5 50850210 50850381 -148779769 + MIR SINE MIR 32 208 -54 2228 89 0 0 chr5 50850484 50850797 -148779353 + AluSx SINE Alu 1 313 0 337 312 143 50 chr5 50852665 50853336 -148776814 - L2 LINE L2 -107 3165 2438 28 48 0 0 chr5 50854559 50854601 -148775549 + AT_rich Low_complexity Low_complexity 1 42 0 2113 93 0 24 chr5 50854786 50855077 -148775073 + AluSc SINE Alu 1 284 -25 207 0 0 0 chr5 50855077 50855100 -148775050 + (TTA)n Simple_repeat Simple_repeat 3 25 0 453 263 40 29 chr5 50855369 50855544 -148774606 + MER104 DNA Tc2 1 177 -3 312 331 33 0 chr5 50855569 50855690 -148774460 - MIR SINE MIR -135 127 3 301 339 108 0 chr5 50855695 50855825 -148774325 - MIR SINE MIR -3 259 116 1751 192 28 6 chr5 50856272 50856626 -148773524 + MLT1A1 LTR MaLR 1 415 -13 1010 189 4 63 chr5 50856877 50857115 -148773035 - L1MB8 LINE L1 -6 6172 5949 1162 171 66 4 chr5 50857115 50857520 -148772630 - LTR54 LTR ERV1 -19 491 1 1996 165 37 3 chr5 50857524 50857875 -148772275 - MLT1A1 LTR MaLR -2 363 1 250 350 0 0 chr5 50858718 50858798 -148771352 + L2 LINE L2 3234 3313 0 241 299 0 45 chr5 50858844 50858911 -148771239 - L2 LINE L2 -8 3305 3242 534 265 166 14 chr5 50859645 50859868 -148770282 - MIR SINE MIR 0 262 6 205 245 20 0 chr5 50859895 50859944 -148770206 + (TA)n Simple_repeat Simple_repeat 1 50 0 289 296 17 78 chr5 50860113 50860228 -148769922 + MER5A DNA MER1_type 37 144 -45 227 308 0 44 chr5 50860285 50860376 -148769774 + MER5B DNA MER1_type 3 89 -89 875 150 104 17 chr5 50860643 50860816 -148769334 + MER5A DNA MER1_type 1 188 -1 23 0 0 0 chr5 50861241 50861264 -148768886 + AT_rich Low_complexity Low_complexity 1 23 0 471 295 33 0 chr5 50861297 50861419 -148768731 - MIR SINE MIR -70 192 67 781 213 6 0 chr5 50861466 50861626 -148768524 - L1MA5A LINE L1 -5 6292 6132 43 71 0 0 chr5 50862575 50862660 -148767490 + AT_rich Low_complexity Low_complexity 1 85 0 251 326 11 0 chr5 50863592 50863681 -148766469 - L1ME LINE L1 -403 5718 5629 300 252 47 63 chr5 50863717 50863844 -148766306 + L1ME4a LINE L1 5621 5745 -376 528 295 36 26 chr5 50863963 50864156 -148765994 + MIR SINE MIR 67 261 -1 297 207 345 10 chr5 50864192 50864395 -148765755 + L1ME4a LINE L1 5850 6120 -1 2809 3 0 3 chr5 50864426 50864738 -148765412 - AluYa5 SINE Alu 0 311 1 204 125 0 0 chr5 50865511 50865543 -148764607 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 1641 230 41 37 chr5 50866127 50866587 -148763563 - MLT1C LTR MaLR 0 467 6 2187 123 0 0 chr5 50867355 50867665 -148762485 - AluSx SINE Alu -2 310 1 223 239 0 0 chr5 50868446 50868492 -148761658 - L2 LINE L2 -10 3303 3258 22 35 0 0 chr5 50868824 50868853 -148761297 + AT_rich Low_complexity Low_complexity 1 29 0 1581 36 5 15 chr5 50868868 50869063 -148761087 - AluY SINE Alu -9 302 110 6097 172 32 14 chr5 50869254 50870995 -148759155 - L1PA16 LINE L1 -3 7601 5812 2382 58 0 36 chr5 50870995 50871303 -148758847 - AluY SINE Alu -14 297 1 6097 172 32 14 chr5 50871303 50871717 -148758433 - L1PA16 LINE L1 -1792 5812 5407 787 260 68 7 chr5 50871722 50872014 -148758136 - L1PA16 LINE L1 -5090 2491 2182 357 260 10 0 chr5 50872215 50872311 -148757839 - L1PA16 LINE L1 -5399 2182 2086 1033 322 54 44 chr5 50872407 50873018 -148757132 - L1PA16 LINE L1 -6170 1404 788 23 0 0 0 chr5 50873160 50873183 -148756967 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 50874089 50874110 -148756040 + AT_rich Low_complexity Low_complexity 1 21 0 291 314 20 19 chr5 50874607 50874713 -148755437 + MIR3 SINE MIR 71 177 -31 635 190 0 17 chr5 50874713 50874829 -148755321 + FLAM_A SINE Alu 1 114 -19 242 189 0 81 chr5 50875962 50876036 -148754114 + L1ME LINE L1 5750 5817 -347 23 0 0 0 chr5 50877507 50877530 -148752620 + AT_rich Low_complexity Low_complexity 1 23 0 462 254 129 68 chr5 50877649 50877896 -148752254 - MIR SINE MIR -6 256 5 387 301 123 6 chr5 50877899 50878062 -148752088 - MIR SINE MIR -79 183 2 2401 75 7 0 chr5 50880374 50880681 -148749469 + AluSc SINE Alu 1 309 0 21 0 0 0 chr5 50881969 50881990 -148748160 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 50882445 50882476 -148747674 + AT_rich Low_complexity Low_complexity 1 31 0 604 226 52 61 chr5 50883629 50883841 -148746309 + MER63A DNA MER1_type 1 210 0 252 0 0 0 chr5 50883877 50883905 -148746245 + (TAGA)n Simple_repeat Simple_repeat 3 30 0 261 209 0 0 chr5 50884446 50884513 -148745637 + (TA)n Simple_repeat Simple_repeat 2 68 0 25 65 0 0 chr5 50888067 50888113 -148742037 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr5 50888797 50888832 -148741318 + AT_rich Low_complexity Low_complexity 1 35 0 940 242 8 6 chr5 50889216 50889538 -148740612 + L1MEc LINE L1 2153 2432 -3783 639 342 4 4 chr5 50890755 50890980 -148739170 - MIR SINE MIR -7 255 31 219 170 19 57 chr5 50891068 50891121 -148739029 + L2 LINE L2 3263 3313 0 2223 172 15 128 chr5 50891137 50891221 -148738929 - MLT2B1 LTR ERVL 0 520 428 441 0 0 0 chr5 50891221 50891270 -148738880 + (CA)n Simple_repeat Simple_repeat 2 50 0 216 0 0 0 chr5 50891269 50891293 -148738857 + (TA)n Simple_repeat Simple_repeat 2 25 0 * 2223 172 15 128 chr5 50891270 50891794 -148738356 - MLT2B1 LTR ERVL -92 428 1 7153 161 9 14 chr5 50891794 50893075 -148737075 - ERVL-B1 LTR ERVL -7 5757 4483 318 330 78 31 chr5 50893144 50893335 -148736815 - L3 LINE CR1 -6 1571 1372 2241 116 0 0 chr5 50893662 50893955 -148736195 + AluSx SINE Alu 1 293 -19 14997 88 9 2 chr5 50894307 50897198 -148732952 - L1PA7 LINE L1 -8 6146 3233 2018 132 3 7 chr5 50898095 50898398 -148731752 + AluSx SINE Alu 1 302 -10 188 247 14 82 chr5 50898699 50898772 -148731378 + L2 LINE L2 2976 3043 -229 22 35 0 0 chr5 50899985 50900014 -148730136 + AT_rich Low_complexity Low_complexity 1 29 0 198 284 55 46 chr5 50900844 50900953 -148729197 + MIR SINE MIR 112 221 -41 22 0 0 0 chr5 50902024 50902046 -148728104 + AT_rich Low_complexity Low_complexity 1 22 0 219 234 16 78 chr5 50904481 50904545 -148725605 + L2 LINE L2 3143 3202 -70 598 110 30 10 chr5 50906318 50906418 -148723732 + L1MC1 LINE L1 6232 6333 0 27 81 0 0 chr5 50907183 50907245 -148722905 + AT_rich Low_complexity Low_complexity 1 62 0 436 224 12 73 chr5 50909883 50910048 -148720102 + FRAM SINE Alu 1 151 -25 1470 208 120 3 chr5 50911263 50911614 -148718536 - MSTD LTR MaLR 0 396 5 578 281 33 54 chr5 50911807 50911965 -148718185 + MIR SINE MIR 2 155 -107 1832 145 13 40 chr5 50911965 50912268 -148717882 + AluSx SINE Alu 1 295 -17 578 281 33 54 chr5 50912268 50912351 -148717799 + MIR SINE MIR 155 238 -24 252 288 127 17 chr5 50913052 50913170 -148716980 - MIR SINE MIR -65 197 67 336 352 47 0 chr5 50914170 50914298 -148715852 + MIR SINE MIR 71 204 -58 709 221 31 79 chr5 50914732 50914986 -148715164 - MIR SINE MIR 0 262 21 334 208 39 13 chr5 50914990 50915067 -148715083 - MER58 DNA MER1_type 0 2420 2342 255 243 48 58 chr5 50915153 50915256 -148714894 - MIR SINE MIR -54 208 107 1484 69 0 21 chr5 50915367 50915556 -148714594 - AluY SINE Alu -126 185 1 2120 114 7 10 chr5 50915793 50916091 -148714059 - AluSg SINE Alu -13 297 1 306 279 149 32 chr5 50917909 50918063 -148712087 + MIR SINE MIR 21 192 -70 447 313 22 0 chr5 50921216 50921350 -148708800 + MIR SINE MIR 40 176 -86 320 291 97 29 chr5 50923586 50923761 -148706389 + MIR SINE MIR 10 196 -66 586 184 36 18 chr5 50923910 50924078 -148706072 - ERVL LTR ERVL -630 5134 4964 197 225 0 0 chr5 50924092 50924132 -148706018 - L2 LINE L2 -7 3265 3226 1200 124 40 0 chr5 50924264 50924466 -148705684 - ERVL LTR ERVL -789 4975 4766 253 216 112 0 chr5 50924476 50924561 -148705589 - MLT2B2 LTR ERVL -143 372 239 1995 125 14 0 chr5 50924561 50924842 -148705308 + AluY SINE Alu 1 285 -26 1659 170 10 29 chr5 50931478 50931784 -148698366 + AluJb SINE Alu 1 300 -12 298 320 67 42 chr5 50935108 50935392 -148694758 - HAL1b LINE L1 -837 511 221 228 218 18 55 chr5 50936239 50936349 -148693801 + T-rich Low_complexity Low_complexity 3 108 0 749 234 30 10 chr5 50936795 50936992 -148693158 + MER2 DNA MER2_type 1 201 -144 615 239 81 62 chr5 50936992 50937251 -148692899 + MER21B LTR ERV1 395 658 -205 1929 221 55 4 chr5 50937257 50937751 -148692399 - L1 LINE L1 -760 5386 4868 1914 104 60 27 chr5 50940870 50941169 -148688981 - AluSx SINE Alu -3 309 1 780 153 69 0 chr5 50941188 50941332 -148688818 - L1MB2 LINE L1 -342 5829 5676 502 275 62 6 chr5 50942794 50942954 -148687196 - MER5B DNA MER1_type -9 169 1 38 39 0 0 chr5 50944338 50944390 -148685760 + AT_rich Low_complexity Low_complexity 1 52 0 222 0 51 26 chr5 50944458 50944497 -148685653 + (CTA)n Simple_repeat Simple_repeat 3 42 0 229 35 53 53 chr5 50944618 50944675 -148685475 + (CTA)n Simple_repeat Simple_repeat 3 59 0 186 67 67 0 chr5 50944691 50944736 -148685414 + (TA)n Simple_repeat Simple_repeat 1 48 0 2089 108 7 0 chr5 50944736 50945023 -148685127 - AluSx SINE Alu -23 289 1 17266 109 10 3 chr5 50945305 50947845 -148682305 - L1P3 LINE L1 -2369 4092 1534 * 40257 71 11 10 chr5 50947829 50953973 -148676177 - L1PA5 LINE L1 0 6154 2 11756 91 1 16 chr5 50953969 50955560 -148674590 - L1P3 LINE L1 -4892 1569 3 * 1343 232 50 6 chr5 50955801 50956163 -148673987 + L1ME1 LINE L1 5765 6142 -24 223 288 68 68 chr5 50956884 50957016 -148673134 + L2 LINE L2 3136 3267 -5 1891 193 21 13 chr5 50957582 50957961 -148672189 - L1ME1 LINE L1 -6 6160 5779 22 35 0 0 chr5 50958277 50958306 -148671844 + AT_rich Low_complexity Low_complexity 1 29 0 1167 207 155 37 chr5 50958943 50959266 -148670884 - MLT1A1 LTR MaLR -3 362 2 2054 121 7 36 chr5 50959664 50959969 -148670181 + AluSx SINE Alu 1 296 -16 252 290 0 0 chr5 50960151 50960213 -148669937 + L2 LINE L2 3252 3313 0 297 264 0 55 chr5 50961563 50961654 -148668496 - L2 LINE L2 -1 3312 3227 320 125 0 0 chr5 50961772 50961820 -148668330 - MADE1 DNA Mariner 0 80 33 205 175 0 0 chr5 50961909 50961949 -148668201 + CT-rich Low_complexity Low_complexity 1 40 0 1580 159 33 18 chr5 50962056 50962332 -148667818 + AluJo SINE Alu 26 305 -7 25 51 0 0 chr5 50962965 50963004 -148667146 + AT_rich Low_complexity Low_complexity 1 39 0 181 318 158 64 chr5 50963335 50963646 -148666504 - L2 LINE L2 -410 2904 2565 749 176 27 8 chr5 50963952 50964126 -148666024 + Charlie1a DNA MER1_type 36 258 -1197 1890 180 90 2 chr5 50964150 50964551 -148665599 + Charlie1a DNA MER1_type 880 1315 -140 240 91 0 0 chr5 50964548 50964581 -148665569 + Charlie1a DNA MER1_type 1417 1449 -6 * 280 169 0 17 chr5 50964661 50964720 -148665430 - Charlie1a DNA MER1_type -1 1454 1397 198 0 0 0 chr5 50965875 50965897 -148664253 + (CA)n Simple_repeat Simple_repeat 1 22 0 201 216 0 81 chr5 50966383 50966457 -148663693 + (CGGGG)n Simple_repeat Simple_repeat 2 69 0 303 104 0 0 chr5 50966965 50967013 -148663137 + (CA)n Simple_repeat Simple_repeat 2 49 0 261 337 69 11 chr5 50969145 50969320 -148660830 + L2 LINE L2 1536 1720 -1594 264 303 248 22 chr5 50969328 50969972 -148660178 + L2 LINE L2 1990 2779 -535 209 182 18 0 chr5 50970040 50970095 -148660055 + (CA)n Simple_repeat Simple_repeat 2 57 0 346 287 206 22 chr5 50971578 50971850 -148658300 + MLT1L LTR MaLR 168 489 -126 1039 306 97 46 chr5 50972339 50973173 -148656977 - L2 LINE L2 -496 2818 1942 21 57 0 0 chr5 50975106 50975141 -148655009 + AT_rich Low_complexity Low_complexity 1 35 0 2030 103 60 20 chr5 50975352 50975652 -148654498 + AluSx SINE Alu 1 312 0 238 232 174 14 chr5 50976379 50976448 -148653702 + L2 LINE L2 3184 3263 -9 242 185 0 77 chr5 50976487 50976552 -148653598 - L1ME3A LINE L1 -5 6165 6106 2005 225 30 2 chr5 50976570 50977010 -148653140 - LTR40c LTR ERVL -13 452 1 231 227 11 80 chr5 50977040 50977128 -148653022 - L1ME3 LINE L1 -88 6074 5993 332 317 48 0 chr5 50977215 50977360 -148652790 - L1ME3 LINE L1 -219 5951 5800 463 221 138 47 chr5 50977408 50977662 -148652488 - L1M4 LINE L1 -2186 3960 3684 323 242 48 11 chr5 50977690 50977878 -148652272 - L1MDb LINE L1 -5104 1302 1128 2191 133 7 0 chr5 50978056 50978365 -148651785 - AluSx SINE Alu 0 312 2 415 125 31 0 chr5 50978408 50978472 -148651678 + U4 snRNA snRNA 1 66 -79 1044 194 5 30 chr5 50978746 50978947 -148651203 + AluJo SINE Alu 30 225 -87 198 0 0 0 chr5 50978978 50979000 -148651150 + (A)n Simple_repeat Simple_repeat 1 22 0 21 36 0 0 chr5 50979207 50979235 -148650915 + AT_rich Low_complexity Low_complexity 1 28 0 401 270 42 48 chr5 50979746 50979935 -148650215 - L1ME3 LINE L1 -351 5770 5583 185 242 15 76 chr5 50980098 50980164 -148649986 - L3b LINE CR1 -9 1574 1513 448 273 14 28 chr5 50980458 50980601 -148649549 - MLT1G LTR MaLR 0 542 402 786 242 87 38 chr5 50980627 50980891 -148649259 - MLT1G LTR MaLR -304 286 10 769 176 0 22 chr5 50980943 50981079 -148649071 - FLAM_C SINE Alu 0 133 1 886 185 0 110 chr5 50981111 50981338 -148648812 - MER20 DNA MER1_type -17 202 1 264 30 0 0 chr5 50982022 50982055 -148648095 + (T)n Simple_repeat Simple_repeat 1 33 0 1754 126 8 0 chr5 50982463 50982717 -148647433 + AluSx SINE Alu 42 297 -15 361 294 110 12 chr5 50982804 50982967 -148647183 - MIR SINE MIR 0 262 84 2180 75 14 7 chr5 50983067 50983347 -148646803 + L1PA10 LINE L1 5877 6158 -10 442 223 11 11 chr5 50983708 50983802 -148646348 - L2 LINE L2 -5 3308 3215 281 232 29 14 chr5 50983814 50983883 -148646267 + MER69 DNA AcHobo 1 70 -2456 851 282 101 11 chr5 50983970 50984335 -148645815 + MER69 DNA AcHobo 1914 2311 -215 220 204 23 0 chr5 50984609 50984653 -148645497 + GA-rich Low_complexity Low_complexity 1 45 0 1792 196 30 48 chr5 50985192 50985589 -148644561 - MLT1B LTR MaLR 0 390 1 1758 210 24 22 chr5 50985930 50986345 -148643805 - LTR40c LTR ERVL 0 465 50 354 286 20 20 chr5 50986346 50986444 -148643706 + MLT1D LTR MaLR 1 98 -407 1223 190 78 24 chr5 50986449 50986781 -148643369 + MLT1D-int LTR MaLR 248 597 -774 22 0 0 0 chr5 50986781 50986803 -148643347 + AT_rich Low_complexity Low_complexity 1 22 0 622 205 24 16 chr5 50986809 50987104 -148643046 + MLT1A2 LTR MaLR 1 362 -12 2485 232 83 50 chr5 50987138 50987876 -148642274 + MLT1D-int LTR MaLR 609 1370 -1 1457 192 156 37 chr5 50987878 50988315 -148641835 + MLT1D LTR MaLR 14 502 -3 235 214 0 36 chr5 50988316 50988372 -148641778 - LTR40c LTR ERVL -410 55 2 24 32 0 0 chr5 50989504 50989535 -148640615 + AT_rich Low_complexity Low_complexity 1 31 0 16308 202 15 9 chr5 50989619 50994854 -148635296 - L1P4 LINE L1 -404 6412 1132 3020 228 40 55 chr5 50994861 50995764 -148634386 - L1P4 LINE L1 -5898 889 1 2130 105 0 7 chr5 50995903 50996238 -148633912 + AluSx SINE Alu 1 333 0 28 48 0 0 chr5 50996271 50996313 -148633837 + AT_rich Low_complexity Low_complexity 1 42 0 2372 173 33 54 chr5 50996407 50996658 -148633492 + MER44D DNA MER2_type 41 296 -2191 2029 136 0 0 chr5 50996658 50996952 -148633198 - AluSx SINE Alu -18 294 1 2372 173 33 54 chr5 50996952 50997221 -148632929 + MER44D DNA MER2_type 296 605 0 202 339 46 0 chr5 50997229 50997294 -148632856 + L2 LINE L2 3245 3312 -1 2149 111 3 40 chr5 50997768 50998120 -148632030 - AluSx SINE Alu 0 340 1 819 210 32 6 chr5 50999335 50999492 -148630658 - FRAM SINE Alu -16 160 1 1377 193 20 0 chr5 50999697 50999951 -148630199 - AluJo SINE Alu -11 301 43 438 320 150 20 chr5 51000414 51000761 -148629389 + L2 LINE L2 2916 3307 -6 285 295 0 66 chr5 51001234 51001356 -148628794 + MIR SINE MIR 82 195 -67 308 270 102 22 chr5 51001425 51001562 -148628588 + L1ME4a LINE L1 5956 6103 -18 655 277 183 24 chr5 51001588 51002031 -148628119 - L2 LINE L2 -54 3259 2748 340 307 74 70 chr5 51003529 51003744 -148626406 + MIR SINE MIR 47 262 0 1853 179 3 0 chr5 51004926 51005227 -148624923 + AluJo SINE Alu 1 302 -10 999 302 180 17 chr5 51005702 51006116 -148624034 + L2 LINE L2 2223 2568 -745 2229 117 0 0 chr5 51006116 51006415 -148623735 + AluSx SINE Alu 1 299 -13 999 302 180 17 chr5 51006415 51006933 -148623217 + L2 LINE L2 2568 3313 0 22 0 0 0 chr5 51009287 51009309 -148620841 + AT_rich Low_complexity Low_complexity 1 22 0 411 326 16 0 chr5 51009532 51009661 -148620489 - MIR SINE MIR -72 190 60 31 0 0 0 chr5 51009748 51009779 -148620371 + AT_rich Low_complexity Low_complexity 1 31 0 267 296 12 0 chr5 51009955 51010036 -148620114 + MIR SINE MIR 36 117 -91 2168 106 3 7 chr5 51010112 51010405 -148619745 + AluSx SINE Alu 1 292 -20 233 29 0 29 chr5 51010706 51010741 -148619409 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 1041 171 0 12 chr5 51010741 51010891 -148619259 - AluSg/x SINE Alu -29 281 132 2186 101 10 7 chr5 51010891 51011188 -148618962 - AluY SINE Alu -13 298 1 1041 171 0 12 chr5 51011188 51011201 -148618949 - AluSg/x SINE Alu -178 132 120 585 112 22 0 chr5 51011458 51011547 -148618603 + AluSg/x SINE Alu 205 295 -17 231 277 21 32 chr5 51012095 51012189 -148617961 + MIR SINE MIR 120 212 -50 1392 272 102 33 chr5 51012996 51013170 -148616980 + L2 LINE L2 2304 2464 -849 315 0 0 0 chr5 51013170 51013205 -148616945 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 1392 272 102 33 chr5 51013205 51013946 -148616204 + L2 LINE L2 2464 3282 -31 250 294 200 0 chr5 51013949 51014034 -148616116 + MER91C DNA MER1_type 4 105 -35 342 321 61 8 chr5 51015774 51015905 -148614245 + MIR3 SINE MIR 9 146 -62 1836 166 7 14 chr5 51015934 51016223 -148613927 + AluSx SINE Alu 1 287 -25 1733 118 19 15 chr5 51016623 51016894 -148613256 + AluSx SINE Alu 37 308 -4 21 36 0 0 chr5 51018164 51018192 -148611958 + AT_rich Low_complexity Low_complexity 1 28 0 218 215 200 0 chr5 51018602 51018667 -148611483 + MIR SINE MIR 185 262 0 1526 116 66 53 chr5 51018698 51019018 -148611132 + MER33 DNA MER1_type 1 324 0 273 333 11 0 chr5 51020101 51020194 -148609956 + L2 LINE L2 3215 3308 -5 192 226 87 61 chr5 51020184 51020299 -148609851 - L2 LINE L2 -1313 2001 1884 * 23 0 0 0 chr5 51020469 51020492 -148609658 + AT_rich Low_complexity Low_complexity 1 23 0 2351 103 3 3 chr5 51021122 51021434 -148608716 + AluSx SINE Alu 1 312 0 2275 108 0 13 chr5 51023038 51023354 -148606796 + AluSx SINE Alu 1 312 0 220 267 0 0 chr5 51023808 51023853 -148606297 + polypurine Low_complexity Low_complexity 2 46 0 535 254 11 5 chr5 51024993 51025141 -148605009 - MIR SINE MIR -9 253 106 2321 110 0 0 chr5 51026142 51026441 -148603709 - AluSq SINE Alu -14 299 1 188 194 14 139 chr5 51027608 51027680 -148602470 + L2 LINE L2 3191 3253 -19 954 82 5 223 chr5 51029215 51029618 -148600532 - L1PA7 LINE L1 0 6154 5840 186 346 144 33 chr5 51029777 51030383 -148599767 + L2 LINE L2 1855 2527 -787 204 128 0 26 chr5 51030964 51031003 -148599147 + (TC)n Simple_repeat Simple_repeat 2 39 0 225 321 47 9 chr5 51031051 51031157 -148598993 - L2 LINE L2 -5 3308 3199 488 273 73 77 chr5 51031619 51031905 -148598245 + L1MC4a LINE L1 5575 5859 -1949 1380 90 20 10 chr5 51031944 51032145 -148598005 + L1PB1 LINE L1 5946 6148 -3 513 282 49 73 chr5 51033457 51033796 -148596354 + L1ME LINE L1 5294 5622 -499 206 288 0 0 chr5 51035117 51035176 -148594974 + (TG)n Simple_repeat Simple_repeat 1 59 0 373 310 43 9 chr5 51037669 51037785 -148592365 - MIR SINE MIR -140 122 3 192 152 0 0 chr5 51037802 51037835 -148592315 - L2 LINE L2 0 3313 3281 287 292 143 24 chr5 51038337 51038546 -148591604 - MIR SINE MIR -6 256 23 493 295 35 29 chr5 51039644 51039817 -148590333 + MER5A DNA MER1_type 13 186 -3 182 198 259 37 chr5 51039840 51039921 -148590229 + L2 LINE L2 3168 3266 -6 21 0 0 0 chr5 51041683 51041704 -148588446 + AT_rich Low_complexity Low_complexity 1 21 0 1467 188 9 52 chr5 51041732 51042057 -148588093 - AluJo SINE Alu -1 311 1 644 287 56 50 chr5 51042436 51042757 -148587393 - L2 LINE L2 0 3313 2991 21 57 0 0 chr5 51046179 51046214 -148583936 + AT_rich Low_complexity Low_complexity 1 35 0 428 260 0 0 chr5 51046531 51046627 -148583523 - MIR SINE MIR -130 132 37 193 304 58 0 chr5 51046666 51046735 -148583415 - MIR SINE MIR -19 243 171 264 359 141 6 chr5 51046793 51046963 -148583187 + MIR SINE MIR 60 252 -10 229 325 91 45 chr5 51048129 51048283 -148581867 + MER5A DNA MER1_type 7 167 -22 224 310 86 63 chr5 51048142 51048316 -148581834 - MER5A DNA MER1_type -5 184 7 * 638 219 0 8 chr5 51049401 51049529 -148580621 + L2 LINE L2 3187 3313 0 198 0 0 0 chr5 51051159 51051181 -148578969 + (A)n Simple_repeat Simple_repeat 1 22 0 222 234 0 0 chr5 51052931 51052978 -148577172 + L2 LINE L2 3251 3297 -16 238 245 19 0 chr5 51054230 51054283 -148575867 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 287 217 184 72 chr5 51054283 51054490 -148575660 - L1MC4a LINE L1 -1878 5930 5701 209 195 0 0 chr5 51055601 51055642 -148574508 - L2 LINE L2 0 3272 3232 1075 165 11 0 chr5 51056196 51056378 -148573772 - MER5A DNA MER1_type -2 187 4 318 270 45 36 chr5 51056982 51057093 -148573057 - MIR SINE MIR -10 252 141 21 0 0 0 chr5 51057099 51057120 -148573030 + AT_rich Low_complexity Low_complexity 1 21 0 484 269 50 14 chr5 51057222 51057363 -148572787 - MIR SINE MIR -112 150 5 857 71 95 8 chr5 51057428 51057554 -148572596 - MER85 DNA T2_type 0 139 3 427 280 11 79 chr5 51058215 51058404 -148571746 + MER5B DNA MER1_type 3 178 0 270 113 306 16 chr5 51059060 51059122 -148571028 - MADE1 DNA Mariner 0 80 1 188 326 0 22 chr5 51059434 51059480 -148570670 + L2 LINE L2 3249 3293 -20 1956 150 24 24 chr5 51059725 51060104 -148570046 - L1MC1 LINE L1 0 6333 5955 342 316 38 61 chr5 51060139 51060484 -148569666 - L1MC1 LINE L1 -304 5817 5481 204 227 114 57 chr5 51060856 51060944 -148569206 + MER5A DNA MER1_type 31 123 -66 1869 150 14 7 chr5 51063134 51063428 -148566722 - AluSx SINE Alu -16 296 1 275 304 68 20 chr5 51063858 51064006 -148566144 - MER5B DNA MER1_type -6 172 18 436 67 0 180 chr5 51065582 51065625 -148564525 + MADE1 DNA Mariner 8 29 -51 2306 119 0 0 chr5 51065625 51065937 -148564213 + AluSx SINE Alu 1 312 0 436 67 0 180 chr5 51065937 51065982 -148564168 + MADE1 DNA Mariner 29 80 0 255 320 13 13 chr5 51067038 51067116 -148563034 + MIR3 SINE MIR 89 166 -42 323 237 86 0 chr5 51069229 51069322 -148560828 - MER5A DNA MER1_type -86 103 3 315 330 28 0 chr5 51069424 51069530 -148560620 + MIR3 SINE MIR 90 198 -10 28 0 0 0 chr5 51069835 51069863 -148560287 + AT_rich Low_complexity Low_complexity 1 28 0 704 181 17 0 chr5 51069912 51070028 -148560122 + FLAM_A SINE Alu 5 122 -11 2259 101 10 0 chr5 51070050 51070348 -148559802 + AluSg SINE Alu 1 301 -9 946 135 9 112 chr5 51070603 51070818 -148559332 - MER20 DNA MER1_type 0 219 27 302 248 193 19 chr5 51072181 51072342 -148557808 + MER5A DNA MER1_type 1 189 0 406 83 125 14 chr5 51072800 51072872 -148557278 + FLAM_A SINE Alu 31 110 -32 324 128 0 0 chr5 51074559 51074606 -148555544 + L2 LINE L2 3264 3310 -3 1109 128 56 0 chr5 51074806 51075002 -148555148 + L1MA9 LINE L1 6106 6312 0 21 0 0 0 chr5 51075314 51075335 -148554815 + AT_rich Low_complexity Low_complexity 1 21 0 845 220 51 95 chr5 51079580 51079891 -148550259 - LTR56 LTR ERV1 -25 420 132 2211 112 0 16 chr5 51079891 51080196 -148549954 + AluSx SINE Alu 5 304 -8 845 220 51 95 chr5 51080196 51080315 -148549835 - LTR56 LTR ERV1 -313 132 9 211 200 71 29 chr5 51080736 51080806 -148549344 - MIR SINE MIR -17 245 173 * 260 349 61 75 chr5 51080787 51081228 -148548922 - L2 LINE L2 -2 3270 2836 184 255 0 0 chr5 51081268 51081315 -148548835 - MIR SINE MIR -128 134 88 351 291 63 13 chr5 51081963 51082121 -148548029 - L1M4 LINE L1 -2052 4094 3929 5425 125 30 5 chr5 51082493 51083885 -148546265 + L1PA13 LINE L1 4686 6107 -56 269 228 16 150 chr5 51083918 51084045 -148546105 + MIR SINE MIR 63 172 -90 180 0 0 0 chr5 51086770 51086790 -148543360 + (CGGGGG)n Simple_repeat Simple_repeat 1 20 0 324 325 170 24 chr5 51086909 51087121 -148543029 + L1M2 LINE L1 709 951 -5898 1565 130 43 70 chr5 51087373 51087674 -148542476 - MER4A LTR ERV1 0 664 372 240 156 22 22 chr5 51087728 51087773 -148542377 - MER4A LTR ERV1 -566 98 54 267 293 50 0 chr5 51088321 51088420 -148541730 + HAL1b LINE L1 280 383 -965 475 244 108 67 chr5 51088459 51088775 -148541375 + HAL1b LINE L1 446 774 -574 421 251 80 0 chr5 51088795 51088982 -148541168 + HAL1b LINE L1 890 1091 -257 309 229 125 52 chr5 51088983 51089146 -148541004 - L1MC/D LINE L1 -885 5459 5294 254 211 0 0 chr5 51089559 51089611 -148540539 + LTR30 LTR ERV1 1 52 -670 1332 80 125 0 chr5 51089611 51089811 -148540339 + LTR12 LTR ERV1 53 277 -437 331 255 10 0 chr5 51089811 51089909 -148540241 + LTR30 LTR ERV1 544 642 -80 636 94 42 0 chr5 51089912 51090008 -148540142 + LTR12 LTR ERV1 615 714 0 2167 157 50 0 chr5 51090095 51090477 -148539673 - MER57A LTR ERV1 0 403 3 27 29 0 0 chr5 51091045 51091079 -148539071 + AT_rich Low_complexity Low_complexity 1 34 0 1380 236 73 104 chr5 51091112 51092075 -148538075 - LTR1B LTR ERV1 -1 1019 1 2313 82 0 7 chr5 51092658 51092952 -148537198 - AluSx SINE Alu -12 300 9 1669 190 34 14 chr5 51093393 51093751 -148536399 + MLT1A1 LTR MaLR 1 365 0 884 235 33 0 chr5 51093889 51094102 -148536048 - MER58A DNA MER1_type 0 224 5 806 207 48 16 chr5 51094573 51094761 -148535389 + MER3 DNA MER1_type 1 194 -15 596 294 71 31 chr5 51094813 51095451 -148534699 + HAL1b LINE L1 77 766 -582 304 318 45 0 chr5 51095496 51095628 -148534522 - LTR16A1 LTR ERVL -3 454 317 335 158 37 12 chr5 51095739 51095821 -148534329 + HAL1 LINE L1 94 177 -2330 1663 198 54 8 chr5 51095913 51096414 -148533736 - LTR27 LTR ERV1 0 501 3 404 261 31 36 chr5 51096546 51096741 -148533409 + L1M4 LINE L1 2255 2448 -3698 2038 259 43 6 chr5 51096747 51097368 -148532782 - L1MEc LINE L1 -5707 689 46 303 28 0 0 chr5 51097719 51097755 -148532395 + (TC)n Simple_repeat Simple_repeat 1 36 0 1109 189 28 9 chr5 51098906 51099118 -148531032 + AluJo SINE Alu 82 297 -15 381 346 112 19 chr5 51099156 51099370 -148530780 - MIR SINE MIR -6 256 23 1843 175 0 19 chr5 51099596 51099910 -148530240 - AluJo SINE Alu -4 308 1 346 344 86 5 chr5 51100102 51100288 -148529862 - L3 LINE CR1 -11 1566 1366 1815 143 29 7 chr5 51100333 51100613 -148529537 + AluJo SINE Alu 1 286 -26 27 0 0 0 chr5 51101359 51101386 -148528764 + AT_rich Low_complexity Low_complexity 1 27 0 2183 116 0 7 chr5 51101386 51101687 -148528463 + AluSx SINE Alu 1 299 -13 309 250 0 0 chr5 51102015 51102107 -148528043 + (TA)n Simple_repeat Simple_repeat 1 92 0 211 130 78 13 chr5 51102400 51102432 -148527718 + (TA)n Simple_repeat Simple_repeat 2 30 -53 2437 128 22 0 chr5 51102432 51102799 -148527351 + THE1C LTR MaLR 1 375 0 211 130 78 13 chr5 51102799 51102843 -148527307 + (TA)n Simple_repeat Simple_repeat 30 83 0 482 304 55 17 chr5 51102864 51103045 -148527105 - MIR SINE MIR -60 202 15 255 242 32 48 chr5 51103462 51103586 -148526564 + MLT1K LTR MaLR 439 560 -28 24 0 0 0 chr5 51104983 51105007 -148525143 + AT_rich Low_complexity Low_complexity 1 24 0 681 258 70 64 chr5 51105120 51105364 -148524786 - MER102b DNA MER1_type -1096 332 84 2796 10 0 3 chr5 51105364 51105672 -148524478 - AluYb8 SINE Alu -11 307 1 681 258 70 64 chr5 51105672 51105757 -148524393 - MER102b DNA MER1_type -1344 84 1 2277 113 6 3 chr5 51106388 51106699 -148523451 - AluSx SINE Alu 0 312 1 1386 251 78 37 chr5 51106727 51107417 -148522733 + L2 LINE L2 2596 3311 -2 23 0 0 0 chr5 51107531 51107554 -148522596 + AT_rich Low_complexity Low_complexity 1 23 0 2620 114 3 8 chr5 51108368 51108745 -148521405 - THE1C LTR MaLR 0 375 1 2000 150 0 3 chr5 51109828 51110128 -148520022 + AluSx SINE Alu 1 299 -13 409 278 148 24 chr5 51110155 51110446 -148519704 - MLT1L LTR MaLR -72 543 217 288 170 0 0 chr5 51110796 51110849 -148519301 + (TA)n Simple_repeat Simple_repeat 1 53 0 546 280 175 0 chr5 51111790 51111979 -148518171 + MIR SINE MIR 3 224 -38 385 204 38 0 chr5 51111989 51112121 -148518029 + (CTA)n Simple_repeat Simple_repeat 2 138 0 1683 279 45 63 chr5 51112219 51112915 -148517235 + L2 LINE L2 1944 2626 -688 619 269 24 63 chr5 51112936 51113085 -148517065 + MLT1H LTR MaLR 20 156 -393 2330 68 4 0 chr5 51113085 51113364 -148516786 + AluSp SINE Alu 25 304 -9 619 269 24 63 chr5 51113364 51113467 -148516683 + MLT1H LTR MaLR 156 262 -287 427 265 123 0 chr5 51113518 51113688 -148516462 + MLT1H LTR MaLR 359 549 0 1044 248 83 50 chr5 51113689 51114230 -148515920 + L2 LINE L2 2624 3184 -129 259 93 0 111 chr5 51114244 51114298 -148515852 - MLT2D LTR ERVL 0 464 417 317 229 0 21 chr5 51114299 51114395 -148515755 + (TATATG)n Simple_repeat Simple_repeat 5 98 0 259 62 0 125 chr5 51114410 51114458 -148515692 + MLT2C1 LTR ERVL 350 391 -6 585 220 8 8 chr5 51114458 51114464 -148515686 + (TA)n Simple_repeat Simple_repeat 1 6 -283 222 37 0 0 chr5 51114464 51114491 -148515659 + (CA)n Simple_repeat Simple_repeat 2 28 0 585 220 8 8 chr5 51114491 51114747 -148515403 + (TA)n Simple_repeat Simple_repeat 5 289 0 2000 161 11 3 chr5 51114758 51115111 -148515039 - MLT2D LTR ERVL -58 356 1 356 319 95 0 chr5 51115115 51115231 -148514919 + L2 LINE L2 3186 3312 -1 2256 108 6 13 chr5 51116294 51116608 -148513542 + AluSx SINE Alu 1 312 0 1599 101 0 5 chr5 51117921 51118129 -148512021 + AluSq SINE Alu 1 207 -106 41404 44 4 1 chr5 51118288 51124455 -148505695 + L1PA3 LINE L1 1 6176 0 506 313 16 2 chr5 51124538 51124710 -148505440 - MIR3 SINE MIR -10 198 18 182 226 132 0 chr5 51125348 51125401 -148504749 - L2 LINE L2 -4 3309 3250 252 247 149 75 chr5 51125918 51126092 -148504058 + MIR SINE MIR 27 213 -49 210 150 0 0 chr5 51126754 51126794 -148503356 + (A)n Simple_repeat Simple_repeat 1 40 0 25 31 0 0 chr5 51127047 51127079 -148503071 + AT_rich Low_complexity Low_complexity 1 32 0 1995 132 53 31 chr5 51128292 51128648 -148501502 + THE1B LTR MaLR 1 364 0 27 29 0 0 chr5 51130329 51130363 -148499787 + AT_rich Low_complexity Low_complexity 1 34 0 360 319 65 32 chr5 51130638 51130854 -148499296 - HERV16 LTR ERVL -1524 4240 4018 2793 318 73 37 chr5 51130905 51132408 -148497742 - HERV16 LTR ERVL -1838 3926 2478 1020 224 145 20 chr5 51132408 51132760 -148497390 + MSTD LTR MaLR 1 396 0 2793 318 73 37 chr5 51132760 51132933 -148497217 - HERV16 LTR ERVL -3286 2478 2313 2162 141 0 0 chr5 51132933 51133237 -148496913 - AluSx SINE Alu -8 304 1 2793 318 73 37 chr5 51133237 51133629 -148496521 - HERV16 LTR ERVL -3451 2313 1730 1093 293 84 3 chr5 51133935 51134327 -148495823 - HERV16 LTR ERVL -3735 1261 838 1176 294 36 15 chr5 51134424 51134836 -148495314 - LTR16A LTR ERVL -14 436 16 951 230 44 60 chr5 51135502 51135885 -148494265 - MER20B DNA MER1_type -23 760 384 4069 210 38 27 chr5 51135898 51136164 -148493986 + L1MB3 LINE L1 4222 4484 -1699 1446 193 42 39 chr5 51136164 51136475 -148493675 + AluJb SINE Alu 1 312 0 4069 210 38 27 chr5 51136475 51137464 -148492686 + L1MB3 LINE L1 4484 5509 -674 1870 128 13 30 chr5 51137464 51137768 -148492382 + AluSx SINE Alu 14 312 0 4069 210 38 27 chr5 51137768 51138451 -148491699 + L1MB3 LINE L1 5509 6183 0 2220 93 24 3 chr5 51138534 51138824 -148491326 + AluSg SINE Alu 1 296 -14 706 260 85 60 chr5 51138863 51139228 -148490922 - MER20B DNA MER1_type -409 374 1 614 181 9 0 chr5 51139261 51139377 -148490773 - MLT1B LTR MaLR -3 387 271 1201 208 12 108 chr5 51139262 51139671 -148490479 - MLT1A2 LTR MaLR -4 370 1 1809 160 81 24 chr5 51139718 51140243 -148489907 - MLT2A2 LTR ERVL 0 554 1 2775 10 0 0 chr5 51140507 51140814 -148489336 - AluYa5 SINE Alu -4 307 1 192 317 17 17 chr5 51142230 51142290 -148487860 + L3 LINE CR1 1515 1574 -3 280 328 68 28 chr5 51142634 51142811 -148487339 - MIR3 SINE MIR -21 187 4 219 245 0 0 chr5 51142850 51142899 -148487251 + (TATATG)n Simple_repeat Simple_repeat 4 52 0 373 318 114 15 chr5 51144269 51144470 -148485680 + MIR SINE MIR 23 243 -19 508 288 123 33 chr5 51144499 51144711 -148485439 + MIR SINE MIR 2 232 -30 21 36 0 0 chr5 51144750 51144778 -148485372 + AT_rich Low_complexity Low_complexity 1 28 0 570 312 63 5 chr5 51144875 51145064 -148485086 + MIR SINE MIR 5 204 -58 225 392 0 0 chr5 51148360 51148434 -148481716 + L2 LINE L2 3172 3245 -27 354 145 24 12 chr5 51149454 51149537 -148480613 + T-rich Low_complexity Low_complexity 1 84 0 396 0 0 0 chr5 51149692 51149736 -148480414 + (TTTCC)n Simple_repeat Simple_repeat 5 48 0 1944 128 4 0 chr5 51149736 51150010 -148480140 - AluSq SINE Alu -38 275 1 21 36 0 0 chr5 51150231 51150259 -148479891 + AT_rich Low_complexity Low_complexity 1 28 0 214 304 130 0 chr5 51151179 51151271 -148478879 + L2 LINE L2 2948 3051 -262 569 139 72 111 chr5 51151279 51151459 -148478691 + MLT1B LTR MaLR 1 173 -217 1390 201 51 17 chr5 51151462 51151755 -148478395 + AluJb SINE Alu 1 303 -9 393 149 0 0 chr5 51151762 51151829 -148478321 + (GGAA)n Simple_repeat Simple_repeat 4 70 0 830 233 5 19 chr5 51151901 51152107 -148478043 + MLT1B LTR MaLR 184 386 -4 405 312 85 32 chr5 51152263 51152545 -148477605 - L2 LINE L2 -616 2698 2402 238 277 15 15 chr5 51152606 51152671 -148477479 - MER5A DNA MER1_type -1 188 124 374 235 13 54 chr5 51152679 51152828 -148477322 - L1M4 LINE L1 -1320 4826 4684 426 277 21 57 chr5 51152866 51153148 -148477002 + L1MCa LINE L1 1322 1593 -4833 571 231 0 0 chr5 51153149 51153257 -148476893 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 3739 108 35 73 chr5 51153254 51154032 -148476118 + Tigger3(Golem) DNA MER2_type 2282 3029 0 1738 260 102 19 chr5 51154067 51154929 -148475221 + L1M4 LINE L1 3257 4258 -1888 264 247 62 12 chr5 51154932 51155013 -148475137 + MER69 DNA AcHobo 721 805 -1721 339 240 0 0 chr5 51155013 51155088 -148475062 + L1MC4 LINE L1 6618 6692 -1350 518 207 35 35 chr5 51155090 51155235 -148474915 + MER69 DNA AcHobo 2017 2161 -365 434 269 97 0 chr5 51155266 51155400 -148474750 - MIR3 SINE MIR -1 207 61 764 76 6 170 chr5 51155422 51155593 -148474557 + Tigger3(Golem) DNA MER2_type 2756 2898 -131 408 259 0 0 chr5 51155939 51156024 -148474126 + L2 LINE L2 3185 3269 -3 2137 131 131 31 chr5 51157847 51158236 -148471914 + MSTA LTR MaLR 1 428 0 180 386 0 0 chr5 51158303 51158373 -148471777 - L2 LINE L2 0 3272 3203 22 56 0 0 chr5 51159405 51159441 -148470709 + AT_rich Low_complexity Low_complexity 1 36 0 615 296 150 45 chr5 51159499 51160006 -148470144 - MLT1K LTR MaLR -16 572 13 397 342 37 27 chr5 51160440 51160735 -148469415 + LTR16C LTR ERVL 194 491 0 180 125 0 0 chr5 51161174 51161206 -148468944 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 476 320 78 27 chr5 51161602 51161821 -148468329 - MIR SINE MIR -31 231 2 1589 119 127 4 chr5 51161956 51162209 -148467941 + AluSg1 SINE Alu 13 296 -13 186 43 0 0 chr5 51162343 51162366 -148467784 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 28300 112 22 64 chr5 51162366 51166212 -148463938 - L1PA7 LINE L1 -17 6137 2130 2893 16 0 0 chr5 51166212 51166530 -148463620 - AluYb8 SINE Alu 0 318 1 28300 112 22 64 chr5 51166530 51166541 -148463609 - L1PA7 LINE L1 -4024 2130 2120 186 43 0 0 chr5 51166541 51166564 -148463586 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 28300 112 22 64 chr5 51166564 51169092 -148461058 - L1PA7 LINE L1 -4034 2120 33 1750 196 113 36 chr5 51169789 51170258 -148459892 + MLT1D LTR MaLR 1 505 0 337 264 140 60 chr5 51170258 51170440 -148459710 - MIR SINE MIR -60 202 9 249 327 110 46 chr5 51170476 51170757 -148459393 + L2 LINE L2 2970 3268 -4 567 237 29 7 chr5 51170880 51171019 -148459131 + MIR SINE MIR 100 241 -21 218 289 51 116 chr5 51172278 51172648 -148457502 - L2 LINE L2 -733 2581 2236 338 289 18 40 chr5 51172715 51172879 -148457271 - MIR SINE MIR -63 199 40 198 103 0 0 chr5 51173095 51173124 -148457026 + (A)n Simple_repeat Simple_repeat 1 29 0 290 176 44 0 chr5 51174021 51174089 -148456061 + MLT1J2 LTR MaLR 71 141 -309 502 313 15 0 chr5 51174305 51174436 -148455714 + MER91A DNA MER1_type 64 196 0 5505 79 19 7 chr5 51175832 51176589 -148453561 - MER4E LTR ERV1 0 766 1 216 0 0 0 chr5 51176868 51176892 -148453258 + (A)n Simple_repeat Simple_repeat 1 24 0 845 157 0 7 chr5 51177426 51177566 -148452584 - MER4E-int LTR ERV1 -106 6652 6514 252 323 0 0 chr5 51177597 51177656 -148452494 + LTR16B LTR ERVL 81 139 -325 2426 117 27 8 chr5 51177656 51178031 -148452119 + MER48 LTR ERV1 1 382 -5 30562 113 29 10 chr5 51178040 51180804 -148449346 + HERVH48 LTR ERV1 4 2904 -3750 2389 79 3 7 chr5 51180804 51181109 -148449041 + AluY SINE Alu 1 304 -7 30562 113 29 10 chr5 51181109 51183298 -148446852 + HERVH48 LTR ERV1 2904 5050 -1604 1160 181 118 25 chr5 51183298 51183536 -148446614 - AluJb SINE Alu -52 260 1 298 309 99 20 chr5 51183624 51183776 -148446374 + MIR3 SINE MIR 2 165 -43 4068 134 23 4 chr5 51184560 51185393 -148444757 - MER4E-int LTR ERV1 -244 6514 5626 2406 134 124 9 chr5 51185394 51186154 -148443996 - MER4E-int LTR ERV1 -1369 5389 4452 * 3671 160 40 3 chr5 51186153 51186783 -148443367 - MER4E-int LTR ERV1 -2670 4088 3436 11245 153 58 66 chr5 51186828 51189926 -148440224 - MER4E-int LTR ERV1 -3685 3073 1 5643 88 20 13 chr5 51189926 51190687 -148439463 - MER4E LTR ERV1 0 766 1 1731 160 11 28 chr5 51191493 51191676 -148438474 - AluSx SINE Alu 0 316 139 2095 125 7 0 chr5 51191676 51191971 -148438179 - AluJb SINE Alu -15 297 1 1731 160 11 28 chr5 51191971 51192108 -148438042 - AluSx SINE Alu -177 139 1 1736 153 110 26 chr5 51192379 51192725 -148437425 + THE1C LTR MaLR 1 375 0 633 345 28 2 chr5 51192795 51193178 -148436972 + LTR16A LTR ERVL 2 447 -3 184 135 108 27 chr5 51193341 51193378 -148436772 - L3 LINE CR1 -110 1467 1428 267 220 0 30 chr5 51193658 51193758 -148436392 + GA-rich Low_complexity Low_complexity 4 100 0 435 326 106 68 chr5 51193821 51194143 -148436007 - MER102b DNA MER1_type -1 340 7 1645 154 17 70 chr5 51194608 51194964 -148435186 - L1MB7 LINE L1 -19 6165 5829 2112 174 16 54 chr5 51194966 51195408 -148434742 - Tigger2a DNA MER2_type -1 433 9 986 149 144 0 chr5 51195415 51195603 -148434547 - L1MB7 LINE L1 -354 5830 5616 430 202 43 21 chr5 51195606 51195700 -148434450 - LTR12 LTR ERV1 -236 478 383 226 218 58 23 chr5 51195707 51195794 -148434356 - LTR30 LTR ERV1 -80 642 553 1356 270 66 53 chr5 51196013 51196892 -148433258 - HERV17 LTR ERV1 0 8626 7511 16826 234 15 2 chr5 51197908 51201132 -148429018 - HERV17 LTR ERV1 -1912 6345 3080 226 232 145 58 chr5 51201133 51201271 -148428879 + HAL1 LINE L1 1740 1889 -618 1682 173 0 0 chr5 51201271 51201531 -148428619 - HERV17 LTR ERV1 -5316 2941 2682 22082 55 1 1 chr5 51201539 51207615 -148422535 - L1PA4 LINE L1 -3 6152 1 6981 262 12 6 chr5 51207615 51209236 -148420914 - HERV17 LTR ERV1 -5341 3285 1655 1744 248 11 46 chr5 51209704 51210232 -148419918 - HERV17 LTR ERV1 -7699 558 18 916 212 88 22 chr5 51210252 51210478 -148419672 - LTR12 LTR ERV1 -236 478 238 1949 116 17 55 chr5 51210645 51210798 -148419352 - L1M4 LINE L1 -565 5619 5462 1697 180 34 0 chr5 51210798 51211092 -148419058 - AluJo SINE Alu -8 304 1 1949 116 17 55 chr5 51211092 51211284 -148418866 - L1M4 LINE L1 -722 5462 5287 261 0 0 0 chr5 51212196 51212225 -148417925 + (TA)n Simple_repeat Simple_repeat 2 30 0 300 83 0 0 chr5 51212225 51212273 -148417877 + (GA)n Simple_repeat Simple_repeat 1 48 0 2117 127 0 0 chr5 51212273 51212556 -148417594 - AluSq SINE Alu -30 283 1 252 0 0 0 chr5 51214347 51214375 -148415775 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 814 271 40 4 chr5 51215643 51215868 -148414282 + MIR SINE MIR 3 235 -27 2329 96 0 7 chr5 51215931 51216233 -148413917 - AluY SINE Alu -11 300 1 621 278 84 31 chr5 51216254 51216587 -148413563 - L1MC/D LINE L1 -364 5757 5404 264 283 0 0 chr5 51216599 51216652 -148413498 + L2 LINE L2 3191 3243 -29 213 175 0 0 chr5 51216682 51216722 -148413428 + (TATATG)n Simple_repeat Simple_repeat 6 45 0 339 96 0 0 chr5 51219203 51219255 -148410895 + (TG)n Simple_repeat Simple_repeat 2 53 0 394 197 26 0 chr5 51219542 51219618 -148410532 + MER116 DNA Mariner 3 80 0 471 292 124 16 chr5 51219636 51219821 -148410329 + MIR SINE MIR 2 206 -56 32 26 0 0 chr5 51219821 51219860 -148410290 + AT_rich Low_complexity Low_complexity 1 39 0 276 258 39 62 chr5 51220532 51220660 -148409490 - MLT1K LTR MaLR -4 584 460 21 36 0 0 chr5 51222004 51222032 -148408118 + AT_rich Low_complexity Low_complexity 1 28 0 217 138 17 35 chr5 51222089 51222147 -148408003 + (CATA)n Simple_repeat Simple_repeat 2 58 0 1538 97 51 5 chr5 51222610 51222826 -148407324 - L1PA8 LINE L1 -9 6163 5938 695 231 0 15 chr5 51223012 51223142 -148407008 - FLAM_A SINE Alu -5 128 1 226 365 32 16 chr5 51225043 51225169 -148404981 + MIR3 SINE MIR 15 142 -66 620 263 191 36 chr5 51225245 51225580 -148404570 - MLT1J2 LTR MaLR -7 443 57 1748 153 41 6 chr5 51226030 51226344 -148403806 - MER45B DNA AcHobo -1 1039 715 489 246 79 0 chr5 51226597 51226723 -148403427 - MER45C DNA AcHobo -335 618 483 535 267 105 7 chr5 51226823 51226992 -148403158 - MER45 DNA AcHobo -788 165 3 200 253 92 58 chr5 51227682 51227769 -148402381 + MIR SINE MIR 42 131 -77 27 29 0 0 chr5 51227838 51227872 -148402278 + AT_rich Low_complexity Low_complexity 1 34 0 525 186 31 0 chr5 51228184 51228281 -148401869 - Tigger3b DNA MER2_type -3 1228 1129 4817 97 37 30 chr5 51228296 51228477 -148401673 - Tigger3b DNA MER2_type -2262 766 588 180 0 0 0 chr5 51228477 51228497 -148401653 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4817 97 37 30 chr5 51228497 51228789 -148401361 - Tigger3b DNA MER2_type -2440 588 299 2136 124 0 3 chr5 51228789 51229087 -148401063 + AluSx SINE Alu 1 297 -15 4817 97 37 30 chr5 51229087 51229372 -148400778 - Tigger3b DNA MER2_type -2729 299 2 211 270 16 16 chr5 51229578 51229641 -148400509 + MIR SINE MIR 170 232 -30 1323 199 76 57 chr5 51230228 51230595 -148399555 - MLT1A2 LTR MaLR 0 374 1 258 220 0 0 chr5 51231717 51231776 -148398374 + T-rich Low_complexity Low_complexity 1 59 0 342 0 0 0 chr5 51232371 51232409 -148397741 + (CA)n Simple_repeat Simple_repeat 2 39 0 1021 190 23 0 chr5 51232849 51233023 -148397127 - MER45A DNA AcHobo 0 178 1 227 297 69 40 chr5 51233027 51233128 -148397022 + L2 LINE L2 3168 3271 -1 4507 157 23 7 chr5 51235465 51236198 -148393952 + L1PB4 LINE L1 5409 6153 -3 21 0 0 0 chr5 51236200 51236221 -148393929 + AT_rich Low_complexity Low_complexity 1 21 0 369 192 25 0 chr5 51236226 51236346 -148393804 + (TA)n Simple_repeat Simple_repeat 1 123 0 303 321 73 0 chr5 51236462 51236571 -148393579 - LTR16A1 LTR ERVL -2 455 339 722 282 146 10 chr5 51236654 51236955 -148393195 - LTR16A1 LTR ERVL -115 342 1 3185 339 67 43 chr5 51237140 51240698 -148389452 - ERVL LTR ERVL -439 5325 1606 744 298 17 4 chr5 51240838 51241073 -148389077 - ERVL LTR ERVL -3667 1329 1092 380 248 0 88 chr5 51241087 51241205 -148388945 + MER58A DNA MER1_type 2 109 0 * 391 200 0 0 chr5 51241205 51241264 -148388886 + MER58A DNA MER1_type 161 219 -5 1309 340 61 24 chr5 51241277 51242302 -148387848 - ERVL LTR ERVL -3909 1087 3 887 289 114 27 chr5 51242306 51242711 -148387439 - LTR16A1 LTR ERVL -17 440 1 200 33 0 33 chr5 51243213 51243243 -148386907 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2125 106 0 70 chr5 51244560 51244891 -148385259 + AluSq SINE Alu 1 308 -5 312 232 0 0 chr5 51245234 51245290 -148384860 + MER5A DNA MER1_type 16 71 -118 43861 46 1 1 chr5 51245297 51251453 -148378697 + L1PA3 LINE L1 3 6152 -3 215 0 0 62 chr5 51251456 51251488 -148378662 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 199 240 42 52 chr5 51251659 51251755 -148378395 - L3 LINE CR1 -579 998 904 301 96 96 0 chr5 51252161 51252213 -148377937 + MER63 DNA MER1_type 1 57 -1004 2536 187 56 18 chr5 51252220 51252771 -148377379 + MER63 DNA MER1_type 471 1042 -19 657 234 0 0 chr5 51253452 51253580 -148376570 + MER3 DNA MER1_type 1 128 -81 209 56 0 28 chr5 51253582 51253618 -148376532 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 5303 260 113 40 chr5 51256601 51256991 -148373159 - L1MEc LINE L1 -437 5798 5438 9467 34 0 2 chr5 51256991 51258906 -148371244 - L1PA2 LINE L1 -1 6154 4242 5303 260 113 40 chr5 51258906 51262297 -148367853 - L1MEc LINE L1 -797 5438 1621 429 284 111 35 chr5 51262356 51262715 -148367435 - L1MEc LINE L1 -4835 1469 1156 859 111 22 1 chr5 51262787 51262931 -148367219 - THE1B LTR MaLR 0 364 222 11782 89 12 0 chr5 51262932 51264483 -148365667 - THE1B-int LTR MaLR -6 1574 6 2118 136 25 35 chr5 51264507 51264875 -148365275 - THE1B LTR MaLR 0 364 1 621 278 104 28 chr5 51264875 51265299 -148364851 - L1MEc LINE L1 -5365 1031 576 1934 130 0 7 chr5 51265302 51265624 -148364526 - AluSx SINE Alu 0 320 1 1269 333 32 24 chr5 51265639 51266254 -148363896 - HERV16 LTR ERVL -4340 656 37 425 304 145 43 chr5 51266312 51266588 -148363562 - LTR16A LTR ERVL -34 416 113 276 202 119 92 chr5 51266801 51266910 -148363240 + LTR50 LTR ERVL 1 112 -683 271 283 101 10 chr5 51266982 51267023 -148363127 + LTR50 LTR ERVL 503 539 -256 2192 128 3 0 chr5 51267023 51267327 -148362823 - AluSx SINE Alu -7 305 1 271 283 101 10 chr5 51267327 51267384 -148362766 + LTR50 LTR ERVL 539 610 -185 4493 149 28 37 chr5 51267384 51268218 -148361932 + LTR1B LTR ERV1 1 826 0 372 279 128 10 chr5 51269896 51270082 -148360068 - MLT1H LTR MaLR -7 542 336 277 275 25 12 chr5 51270401 51270481 -148359669 + L2 LINE L2 3188 3268 -4 226 371 34 65 chr5 51271011 51271290 -148358860 + L2 LINE L2 2958 3311 -2 191 291 47 0 chr5 51271646 51271732 -148358418 - MIR SINE MIR -13 249 160 754 226 70 0 chr5 51272345 51272544 -148357606 - MER45B DNA AcHobo 0 1040 828 2401 229 91 87 chr5 51272548 51272828 -148357322 - Charlie2a DNA MER1_type -851 2011 1734 1387 188 79 20 chr5 51272828 51273120 -148357030 - AluJb SINE Alu 0 312 4 2401 229 91 87 chr5 51273120 51274191 -148355959 - Charlie2a DNA MER1_type -1128 1734 654 411 281 22 37 chr5 51274195 51274237 -148355913 + L2 LINE L2 3180 3221 -92 2092 142 0 0 chr5 51274237 51274548 -148355602 - AluSx SINE Alu -1 311 1 411 281 22 37 chr5 51274548 51274640 -148355510 + L2 LINE L2 3221 3312 -1 32 26 0 0 chr5 51274713 51274752 -148355398 + AT_rich Low_complexity Low_complexity 1 39 0 476 269 55 51 chr5 51274781 51275034 -148355116 - L1MC/D LINE L1 -605 5561 5332 5335 85 3 12 chr5 51275617 51276372 -148353778 - L1PA13 LINE L1 -4 6159 5412 401 311 80 23 chr5 51276584 51277123 -148353027 + L1M4 LINE L1 2157 2735 -3411 25 0 0 0 chr5 51277186 51277211 -148352939 + AT_rich Low_complexity Low_complexity 1 25 0 507 209 58 58 chr5 51278352 51278524 -148351626 - MLT1C LTR MaLR -5 462 291 1785 222 54 22 chr5 51278588 51279034 -148351116 - MLT1C LTR MaLR -7 460 1 228 207 52 17 chr5 51280837 51280895 -148349255 - L2 LINE L2 -2 3311 3252 180 111 0 0 chr5 51280911 51280938 -148349212 + (TAGG)n Simple_repeat Simple_repeat 1 27 0 1359 229 69 16 chr5 51280946 51281322 -148348828 + MSTD LTR MaLR 1 396 0 414 0 0 0 chr5 51281348 51281394 -148348756 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 311 328 34 17 chr5 51281893 51282012 -148348138 + L2 LINE L2 3188 3308 -5 242 308 159 0 chr5 51282161 51282268 -148347882 - L2 LINE L2 0 3272 3149 791 192 25 0 chr5 51282310 51282481 -148347669 + MER33 DNA MER1_type 1 159 -102 26772 82 16 9 chr5 51282481 51287062 -148343088 - L1PA7 LINE L1 -9 6145 1548 514 112 5 214 chr5 51287064 51287279 -148342871 + MER33 DNA MER1_type 152 321 -3 197 344 42 21 chr5 51288061 51288157 -148341993 - MIR SINE MIR -15 247 150 584 322 72 13 chr5 51288387 51288623 -148341527 - MIR SINE MIR -11 251 2 366 297 119 0 chr5 51289814 51289932 -148340218 - MIR SINE MIR -14 248 117 2482 233 59 25 chr5 51292537 51293314 -148336836 + L1MEc LINE L1 1556 2365 -3850 1797 176 0 7 chr5 51293314 51293609 -148336541 + AluSx SINE Alu 1 293 -19 2482 233 59 25 chr5 51293609 51293913 -148336237 + L1MEc LINE L1 2365 2657 -3558 260 343 0 0 chr5 51294022 51294092 -148336058 - MER91B DNA MER1_type -118 72 3 369 0 0 0 chr5 51294203 51294244 -148335906 + (CA)n Simple_repeat Simple_repeat 2 42 0 327 263 12 0 chr5 51294443 51294523 -148335627 + LTR16A LTR ERVL 364 444 -6 28 0 0 0 chr5 51294995 51295023 -148335127 + AT_rich Low_complexity Low_complexity 1 28 0 435 336 50 25 chr5 51295023 51295261 -148334889 - L2 LINE L2 -1370 1944 1701 2628 189 102 12 chr5 51295449 51296096 -148334054 - MER39 LTR ERV1 0 707 3 491 309 62 16 chr5 51296323 51296517 -148333633 + MIR SINE MIR 46 248 -14 619 255 48 38 chr5 51298002 51298316 -148331834 - L1MC4 LINE L1 -108 7934 7618 23 0 0 0 chr5 51298917 51298940 -148331210 + AT_rich Low_complexity Low_complexity 1 23 0 450 316 25 13 chr5 51299160 51299318 -148330832 - MIR3 SINE MIR -10 198 39 399 329 84 7 chr5 51300266 51300421 -148329729 + MIR SINE MIR 28 194 -68 226 344 42 21 chr5 51301437 51301533 -148328617 + MIR SINE MIR 31 128 -80 438 278 52 9 chr5 51302262 51302377 -148327773 - L2 LINE L2 -4 3268 3149 189 356 25 50 chr5 51302400 51302560 -148327590 + MER5A DNA MER1_type 34 189 0 307 323 57 60 chr5 51305103 51305595 -148324555 + L2 LINE L2 2481 3036 -236 429 298 65 0 chr5 51305725 51305849 -148324301 - L2 LINE L2 -4 3268 3137 278 368 78 12 chr5 51305873 51306039 -148324111 + L2 LINE L2 3094 3270 -2 718 325 95 0 chr5 51306116 51306411 -148323739 - L3 LINE CR1 -75 1502 1180 193 294 103 0 chr5 51308765 51308833 -148321317 + L3 LINE CR1 1503 1577 0 189 74 0 0 chr5 51309192 51309219 -148320931 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 609 313 77 17 chr5 51312528 51312931 -148317219 + LTR16A LTR ERVL 18 444 -6 1162 208 0 0 chr5 51313071 51313292 -148316858 + MLT1A1 LTR MaLR 145 365 0 1469 178 57 23 chr5 51313321 51313670 -148316480 - L1PA16 LINE L1 0 6166 5806 2452 205 98 10 chr5 51313671 51314285 -148315865 - MER45B DNA AcHobo -310 730 63 806 280 45 73 chr5 51314325 51314793 -148315357 + HERV16 LTR ERVL 165 619 -4377 756 229 33 56 chr5 51314794 51315008 -148315142 - MER58A DNA MER1_type -3 221 13 213 65 0 0 chr5 51315212 51315243 -148314907 + (A)n Simple_repeat Simple_repeat 1 31 0 241 336 39 19 chr5 51315639 51315743 -148314407 - L2 LINE L2 -40 3273 3168 435 282 77 95 chr5 51315954 51316447 -148313703 + MLT1J LTR MaLR 26 509 -2 539 291 23 11 chr5 51318099 51318274 -148311876 + MIR SINE MIR 44 220 -42 623 273 39 23 chr5 51318941 51319348 -148310802 + LTR16A LTR ERVL 1 444 -6 214 281 110 37 chr5 51320026 51320055 -148310095 - MIR3 SINE MIR -62 146 121 2363 113 11 8 chr5 51320055 51320409 -148309741 + THE1A LTR MaLR 1 355 0 214 281 110 37 chr5 51320409 51320549 -148309601 - MIR3 SINE MIR -87 121 5 3384 71 32 0 chr5 51321521 51321959 -148308191 + MLT2A2 LTR ERVL 1 452 -1 658 214 57 25 chr5 51322516 51322675 -148307475 - MIR SINE MIR -14 248 85 1243 157 89 40 chr5 51322721 51322849 -148307301 + AluJo SINE Alu 1 121 -191 189 0 0 0 chr5 51322849 51322870 -148307280 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1243 157 89 40 chr5 51322870 51322989 -148307161 + AluJo SINE Alu 121 260 -52 296 303 83 0 chr5 51323333 51323465 -148306685 - MLT1L LTR MaLR 0 615 473 2203 103 6 26 chr5 51323746 51324058 -148306092 + AluSg SINE Alu 1 306 -4 813 298 60 45 chr5 51324623 51325153 -148304997 + MLT1H LTR MaLR 12 549 0 223 309 0 37 chr5 51325345 51325426 -148304724 + GA-rich Low_complexity Low_complexity 3 80 0 352 295 48 48 chr5 51326382 51326548 -148303602 - MER5B DNA MER1_type 0 178 13 198 361 35 35 chr5 51327067 51327211 -148302939 - L3 LINE CR1 -15 1562 1419 424 219 63 107 chr5 51328780 51329050 -148301100 + LTR16A1 LTR ERVL 199 456 -1 212 284 24 94 chr5 51329150 51329178 -148300972 - MIR SINE MIR -142 120 92 1846 143 60 30 chr5 51329178 51329542 -148300608 - THE1C LTR MaLR 0 375 1 212 284 24 94 chr5 51329542 51329640 -148300510 - MIR SINE MIR -170 92 3 1860 171 14 20 chr5 51330463 51330819 -148299331 - MLT1A1 LTR MaLR -2 363 10 638 239 66 36 chr5 51330937 51331167 -148298983 + MIR SINE MIR 25 258 -4 2268 118 0 3 chr5 51331445 51331751 -148298399 - AluSq SINE Alu -8 305 1 299 271 47 0 chr5 51331885 51331970 -148298180 - L2 LINE L2 0 3272 3184 7749 23 0 0 chr5 51333806 51334808 -148295342 + L1PA2 LINE L1 5153 6154 -1 1466 214 42 11 chr5 51334820 51335198 -148294952 + L1ME LINE L1 5340 5729 -437 209 56 0 28 chr5 51338181 51338217 -148291933 + (TTAAA)n Simple_repeat Simple_repeat 1 35 0 614 234 0 0 chr5 51338219 51338347 -148291803 - MER3 DNA MER1_type -81 128 1 2267 188 65 11 chr5 51339035 51339573 -148290577 - MER63 DNA MER1_type -24 1037 471 286 82 61 0 chr5 51339580 51339629 -148290521 - MER63 DNA MER1_type -1004 57 6 193 240 42 52 chr5 51340039 51340135 -148290015 + L3 LINE CR1 904 998 -579 215 0 0 62 chr5 51340306 51340338 -148289812 + (TTTTTA)n Simple_repeat Simple_repeat 2 31 0 9413 34 2 1 chr5 51340341 51342251 -148287899 - L1PA3 LINE L1 -3 6152 4242 5183 253 117 31 chr5 51342252 51345643 -148284507 - L1MEc LINE L1 -797 5418 1621 429 284 111 35 chr5 51345702 51346061 -148284089 - L1MEc LINE L1 -4835 1469 1156 859 111 22 1 chr5 51346133 51346277 -148283873 - THE1B LTR MaLR 0 364 222 11805 88 12 0 chr5 51346278 51347829 -148282321 - THE1B-int LTR MaLR -6 1574 6 2092 139 25 35 chr5 51347853 51348221 -148281929 - THE1B LTR MaLR 0 364 1 621 278 104 28 chr5 51348221 51348645 -148281505 - L1MEc LINE L1 -5365 1031 576 1934 130 0 7 chr5 51348648 51348970 -148281180 - AluSx SINE Alu 0 320 1 1269 333 32 24 chr5 51348985 51349600 -148280550 - HERV16 LTR ERVL -4340 656 37 604 310 86 43 chr5 51349658 51350005 -148280145 - LTR16A LTR ERVL -34 416 58 276 202 119 92 chr5 51350164 51350273 -148279877 + LTR50 LTR ERVL 1 112 -683 271 283 101 10 chr5 51350345 51350386 -148279764 + LTR50 LTR ERVL 503 539 -256 2192 128 3 0 chr5 51350386 51350690 -148279460 - AluSx SINE Alu -7 305 1 271 283 101 10 chr5 51350690 51350747 -148279403 + LTR50 LTR ERVL 539 610 -185 4474 150 28 37 chr5 51350747 51351581 -148278569 + LTR1B LTR ERV1 1 826 0 372 279 127 11 chr5 51353259 51353445 -148276705 - MLT1H LTR MaLR -7 542 311 277 275 25 12 chr5 51353764 51353844 -148276306 + L2 LINE L2 3188 3268 -4 226 371 34 65 chr5 51354373 51354652 -148275498 + L2 LINE L2 2958 3311 -2 191 291 47 0 chr5 51355008 51355094 -148275056 - MIR SINE MIR -13 249 160 754 226 70 0 chr5 51355707 51355906 -148274244 - MER45B DNA AcHobo 0 1040 828 2439 228 91 87 chr5 51355910 51356190 -148273960 - Charlie2a DNA MER1_type -851 2011 1734 1387 188 79 20 chr5 51356190 51356482 -148273668 - AluJb SINE Alu 0 312 4 2439 228 91 87 chr5 51356482 51357553 -148272597 - Charlie2a DNA MER1_type -1128 1734 654 411 281 22 37 chr5 51357557 51357599 -148272551 + L2 LINE L2 3180 3221 -92 2092 142 0 0 chr5 51357599 51357910 -148272240 - AluSx SINE Alu -1 311 1 411 281 22 37 chr5 51357910 51358002 -148272148 + L2 LINE L2 3221 3312 -1 32 26 0 0 chr5 51358075 51358114 -148272036 + AT_rich Low_complexity Low_complexity 1 39 0 476 269 55 51 chr5 51358143 51358396 -148271754 - L1MC/D LINE L1 -605 5561 5332 5328 85 3 12 chr5 51358979 51359734 -148270416 - L1PA13 LINE L1 -4 6159 5412 401 311 80 23 chr5 51359946 51360485 -148269665 + L1M4 LINE L1 2157 2735 -3411 25 0 0 0 chr5 51360548 51360573 -148269577 + AT_rich Low_complexity Low_complexity 1 25 0 507 209 58 58 chr5 51361714 51361886 -148268264 - MLT1C LTR MaLR -5 462 291 1803 220 54 22 chr5 51361950 51362396 -148267754 - MLT1C LTR MaLR -7 460 1 277 250 0 37 chr5 51362782 51362890 -148267260 + A-rich Low_complexity Low_complexity 1 104 0 233 29 29 0 chr5 51363099 51363133 -148267017 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 7334 39 0 0 chr5 51363133 51364013 -148266137 - L1PA3 LINE L1 -13 6142 5263 682 310 121 50 chr5 51464645 51465148 -148165002 - L2 LINE L2 -848 2466 1928 1752 174 22 0 chr5 51466912 51467188 -148162962 + AluJb SINE Alu 1 282 -30 1793 209 41 10 chr5 51467533 51467950 -148162200 + MER63B DNA MER1_type 4 433 -3 6850 52 1 36 chr5 51468518 51469502 -148160648 + L1PA5 LINE L1 5194 6145 -9 568 99 25 0 chr5 51469699 51469780 -148160370 + AluJo SINE Alu 53 135 -177 251 306 72 22 chr5 51469785 51469965 -148160185 - L1MEc LINE L1 -4552 2273 2085 255 309 40 13 chr5 51469983 51470132 -148160018 - L1PA15-16 LINE L1 -4272 2577 2425 1317 195 37 26 chr5 51470150 51470422 -148159728 - AluJb SINE Alu -15 297 23 234 309 16 32 chr5 51470498 51470621 -148159529 - L1MEc LINE L1 -4887 1655 1535 554 221 24 9 chr5 51470787 51470925 -148159225 - MLT1C LTR MaLR -4 463 248 654 257 29 101 chr5 51471748 51472094 -148158056 - MER46C DNA MER2_type -17 321 1 302 353 179 0 chr5 51473043 51473199 -148156951 - MER91A DNA MER1_type -10 186 3 392 249 138 21 chr5 51473410 51473599 -148156551 + LTR33 LTR ERVL 1 211 -310 195 162 0 0 chr5 51475117 51475154 -148154996 + (TA)n Simple_repeat Simple_repeat 2 38 0 2178 99 14 0 chr5 51475185 51475479 -148154671 + AluSp SINE Alu 1 298 -15 22 0 0 0 chr5 51475873 51475895 -148154255 + AT_rich Low_complexity Low_complexity 1 22 0 460 280 8 8 chr5 51476918 51477043 -148153107 - MIR SINE MIR -25 237 113 509 318 41 23 chr5 51477814 51478034 -148152116 + MIR SINE MIR 2 225 -37 29 28 0 0 chr5 51479095 51479131 -148151019 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 51479148 51479169 -148150981 + AT_rich Low_complexity Low_complexity 1 21 0 646 293 91 47 chr5 51479232 51479529 -148150621 + MLT1J2 LTR MaLR 3 312 -138 321 289 167 13 chr5 51479565 51479653 -148150497 - L2 LINE L2 -540 2774 2701 1667 255 99 26 chr5 51479653 51480158 -148149992 + MLT1F LTR MaLR 1 542 0 321 289 167 13 chr5 51480158 51480225 -148149925 - L2 LINE L2 -613 2701 2595 552 205 200 30 chr5 51480440 51480640 -148149510 - MLT1C LTR MaLR -271 234 1 21 36 0 0 chr5 51482031 51482059 -148148091 + AT_rich Low_complexity Low_complexity 1 28 0 358 349 0 24 chr5 51482510 51482636 -148147514 + MER5B DNA MER1_type 56 178 0 239 308 30 11 chr5 51482644 51482754 -148147396 - MIR SINE MIR -67 141 30 310 226 45 68 chr5 51482826 51482959 -148147191 + MER103 DNA DNA 34 163 -3 244 290 30 60 chr5 51483427 51483527 -148146623 - L2 LINE L2 -4 3309 3213 991 218 75 4 chr5 51483722 51484029 -148146121 + MER33 DNA MER1_type 1 300 -24 186 208 28 97 chr5 51484061 51484133 -148146017 - MIR SINE MIR -40 222 156 226 260 0 39 chr5 51484978 51485055 -148145095 + GA-rich Low_complexity Low_complexity 4 77 0 461 125 0 12 chr5 51486504 51486584 -148143566 + (TG)n Simple_repeat Simple_repeat 2 80 0 238 229 52 83 chr5 51486670 51486766 -148143384 + MIR SINE MIR 108 200 -62 * 533 286 60 21 chr5 51486764 51486998 -148143152 + MIR SINE MIR 5 247 -15 186 333 0 0 chr5 51487046 51487100 -148143050 + L2 LINE L2 3251 3304 -9 30 69 0 0 chr5 51487844 51487902 -148142248 + AT_rich Low_complexity Low_complexity 1 58 0 904 232 58 4 chr5 51488624 51488865 -148141285 - MER112 DNA MER1_type -6 254 1 961 185 40 0 chr5 51489651 51489851 -148140299 + MER3 DNA MER1_type 2 209 0 211 294 39 0 chr5 51490005 51490056 -148140094 + MIR SINE MIR 210 262 0 261 200 0 0 chr5 51490185 51490240 -148139910 - MER112 DNA MER1_type -7 253 199 285 279 29 0 chr5 51490362 51490430 -148139720 + MIR3 SINE MIR 90 159 -49 1077 196 91 67 chr5 51490516 51490858 -148139292 + MLT1A1 LTR MaLR 4 353 -12 256 333 10 0 chr5 51490847 51490949 -148139201 - Charlie8 DNA MER1_type -1027 1390 188 * 1890 178 0 0 chr5 51491105 51491409 -148138741 + AluJb SINE Alu 7 310 -2 234 300 20 0 chr5 51491410 51491460 -148138690 - MER58 DNA MER1_type -2365 55 5 630 281 88 62 chr5 51491792 51492290 -148137860 + MLT1J LTR MaLR 1 511 0 452 319 58 0 chr5 51493963 51494101 -148136049 - MER91A DNA MER1_type -44 152 7 193 289 219 26 chr5 51494090 51494204 -148135946 - MIR SINE MIR -37 225 90 * 4141 109 7 2 chr5 51494456 51495050 -148135100 - MER4A LTR ERV1 -3 597 1 386 293 111 58 chr5 51495812 51496037 -148134113 - MIR SINE MIR -6 256 20 236 376 74 26 chr5 51496297 51496486 -148133664 + MIR3 SINE MIR 11 208 0 1962 163 0 0 chr5 51497313 51497608 -148132542 - AluSx SINE Alu -17 295 1 521 244 34 28 chr5 51498113 51498289 -148131861 + L1MC/D LINE L1 5635 5811 -1997 1046 115 37 21 chr5 51498297 51498488 -148131662 - L1PA14 LINE L1 0 6161 5968 275 275 176 0 chr5 51499507 51499598 -148130552 - L2 LINE L2 -15 3257 3151 24 32 0 0 chr5 51499628 51499659 -148130491 + AT_rich Low_complexity Low_complexity 1 31 0 192 317 0 0 chr5 51499957 51500017 -148130133 - L3b LINE CR1 -196 1387 1328 468 109 0 206 chr5 51500209 51500384 -148129766 + MER53 DNA DNA 39 177 -12 400 195 0 0 chr5 51500319 51500406 -148129744 - MER53 DNA DNA -102 87 1 * 270 116 0 0 chr5 51501246 51501289 -148128861 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 217 350 39 0 chr5 51501292 51501395 -148128755 - L2 LINE L2 -15 3298 3192 1247 191 23 0 chr5 51501439 51501701 -148128449 + L1MCa LINE L1 29 296 -6130 950 274 16 40 chr5 51501708 51502081 -148128069 - L1M4 LINE L1 -774 5372 5009 910 243 140 37 chr5 51503378 51503699 -148126451 + MLT1E3 LTR MaLR 200 584 -40 396 55 0 0 chr5 51503798 51503853 -148126297 + (TG)n Simple_repeat Simple_repeat 2 56 0 26 0 0 0 chr5 51504165 51504191 -148125959 + AT_rich Low_complexity Low_complexity 1 26 0 23909 53 6 1 chr5 51504520 51506444 -148123706 - L1P LINE L1 -2963 3183 1237 2096 60 53 11 chr5 51506444 51506726 -148123424 - AluY SINE Alu -17 294 1 23909 53 6 1 chr5 51506726 51507962 -148122188 - L1P LINE L1 -4909 1237 8 2550 56 0 0 chr5 51508158 51508461 -148121689 - AluY SINE Alu -8 303 1 496 318 119 46 chr5 51508662 51508964 -148121186 - L3 LINE CR1 -4 1573 1250 407 293 0 0 chr5 51509713 51509812 -148120338 + MIR SINE MIR 7 105 -157 22 0 0 0 chr5 51509812 51509834 -148120316 + AT_rich Low_complexity Low_complexity 1 22 0 1569 179 25 6 chr5 51509842 51510195 -148119955 - L1MA5 LINE L1 -5 6295 5936 1071 192 55 4 chr5 51510195 51510466 -148119684 + L1 LINE L1 4940 5224 -922 678 242 11 34 chr5 51510466 51510644 -148119506 + MIR SINE MIR 89 262 0 4311 120 3 0 chr5 51510679 51511312 -148118838 + MER41B LTR ERV1 1 635 0 16174 37 1 3 chr5 51512630 51515366 -148114784 - L1PA4 LINE L1 -3 6152 3422 604 298 101 0 chr5 51517673 51517931 -148112219 + MER69 DNA AcHobo 48 331 -2195 784 187 24 0 chr5 51518194 51518360 -148111790 - MER96B DNA MER1_type? -238 179 10 467 316 142 22 chr5 51518361 51518678 -148111472 + L3 LINE CR1 617 971 -606 418 284 30 30 chr5 51518700 51518897 -148111253 + LTR33A LTR ERVL 8 204 -319 609 220 161 14 chr5 51518923 51519141 -148111009 + LTR33A LTR ERVL 272 521 -2 421 343 43 14 chr5 51519243 51519453 -148110697 + MIR SINE MIR 13 228 -34 294 329 206 4 chr5 51519484 51519727 -148110423 + L3 LINE CR1 1199 1490 -87 494 305 59 27 chr5 51519762 51519949 -148110201 - MIR SINE MIR -4 258 66 238 228 119 0 chr5 51520098 51520199 -148109951 - L1ME4a LINE L1 0 6121 6009 192 269 30 15 chr5 51520584 51520651 -148109499 + L2 LINE L2 3204 3271 -42 2427 81 0 0 chr5 51520887 51521195 -148108955 - AluY SINE Alu -3 308 1 502 265 71 29 chr5 51521244 51521414 -148108736 + MER5A DNA MER1_type 13 189 0 788 222 22 5 chr5 51521969 51522154 -148107996 - MER5A DNA MER1_type 0 189 2 557 298 126 64 chr5 51522333 51522739 -148107411 - L3 LINE CR1 -326 1251 821 613 167 48 106 chr5 51522763 51522990 -148107160 + L1MD2 LINE L1 6146 6359 0 625 262 93 6 chr5 51523093 51523276 -148106874 + MIR SINE MIR 56 254 -8 298 275 37 18 chr5 51523695 51523804 -148106346 - MLT2E LTR ERVL -486 142 32 196 333 28 0 chr5 51525539 51525611 -148104539 + MIR SINE MIR 119 192 -70 312 215 50 25 chr5 51526246 51526367 -148103783 + A-rich Low_complexity Low_complexity 5 128 0 2186 164 21 2 chr5 51527000 51527428 -148102722 + L1MA9 LINE L1 5872 6307 -5 3327 139 83 2 chr5 51527784 51528387 -148101763 - MER51A LTR ERV1 0 640 1 320 363 48 18 chr5 51528436 51528604 -148101546 + MIR SINE MIR 1 173 -89 276 275 55 18 chr5 51529458 51529567 -148100583 - MLT1J2 LTR MaLR -337 113 1 201 382 48 75 chr5 51529623 51529809 -148100341 - L2 LINE L2 -88 3184 3004 462 114 0 0 chr5 51529854 51529924 -148100226 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 1952 255 77 66 chr5 51530959 51531245 -148098905 + L1MEc LINE L1 606 887 -5509 2741 10 0 0 chr5 51531245 51531543 -148098607 + AluYb8 SINE Alu 21 318 0 1952 255 77 66 chr5 51531543 51532457 -148097693 + L1MEc LINE L1 887 1820 -4576 198 167 0 0 chr5 51532735 51532771 -148097379 + GA-rich Low_complexity Low_complexity 1 36 0 352 269 115 23 chr5 51533042 51533172 -148096978 + MER5A DNA MER1_type 38 179 -10 339 271 75 27 chr5 51534654 51534788 -148095362 + MIR SINE MIR 18 153 -62 693 288 77 81 chr5 51534806 51535275 -148094875 - L2 LINE L2 -5 3308 2842 787 146 98 12 chr5 51535391 51535555 -148094595 + MER41B-int LTR ERV1 1585 1762 -4184 710 132 0 8 chr5 51535556 51535677 -148094473 + MER41B-int LTR ERV1 1988 2107 -4156 * 942 117 14 0 chr5 51535673 51535818 -148094332 + MER41B-int LTR ERV1 2781 2927 -4610 1718 89 31 12 chr5 51535820 51536077 -148094073 + MER41B-int LTR ERV1 2587 2848 -3098 * 11609 114 21 10 chr5 51536069 51538465 -148091685 + MER41B-int LTR ERV1 2738 5946 0 3521 108 108 2 chr5 51538465 51539039 -148091111 + MER41B LTR ERV1 1 635 0 254 319 17 35 chr5 51539954 51540070 -148090080 - MIR SINE MIR -148 114 1 28704 39 35 2 chr5 51540448 51544193 -148085957 + L1P LINE L1 1 3869 -2277 455 304 12 0 chr5 51545053 51545214 -148084936 + Charlie8 DNA MER1_type 60 222 -2195 2164 127 45 101 chr5 51545546 51546052 -148084098 + LTR1 LTR ERV1 49 526 -259 229 231 0 0 chr5 51546052 51546104 -148084046 + LTR30 LTR ERV1 1 52 -670 1794 100 194 168 chr5 51546104 51546672 -148083478 + LTR12 LTR ERV1 58 581 -133 1225 173 60 8 chr5 51546672 51546921 -148083229 + LTR1 LTR ERV1 523 784 -1 23 54 0 0 chr5 51547892 51547929 -148082221 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr5 51548061 51548092 -148082058 + AT_rich Low_complexity Low_complexity 1 31 0 2092 152 0 0 chr5 51548292 51548595 -148081555 - AluSx SINE Alu -9 303 1 388 235 23 15 chr5 51548797 51548929 -148081221 + MER103 DNA DNA 20 152 -14 905 196 88 39 chr5 51549153 51549514 -148080636 - MSTC LTR MaLR 0 428 1 234 114 0 0 chr5 51549930 51549965 -148080185 - U2 snRNA snRNA -153 35 1 1153 201 74 56 chr5 51550397 51550681 -148079469 + AluJo SINE Alu 1 289 -13 32 43 0 0 chr5 51551948 51551994 -148078156 + AT_rich Low_complexity Low_complexity 1 46 0 387 0 0 0 chr5 51552629 51552672 -148077478 + (TG)n Simple_repeat Simple_repeat 2 44 0 354 240 103 64 chr5 51554032 51554238 -148075912 + MIR SINE MIR 16 223 -39 279 0 0 0 chr5 51554899 51554930 -148075220 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 213 94 0 0 chr5 51555265 51555297 -148074853 + (CA)n Simple_repeat Simple_repeat 2 33 0 14190 132 19 16 chr5 51555298 51555893 -148074257 + Tigger1 DNA MER2_type 26 618 -1800 2010 146 3 3 chr5 51555893 51556194 -148073956 + AluJb SINE Alu 1 301 -11 14190 132 19 16 chr5 51556194 51557983 -148072167 + Tigger1 DNA MER2_type 618 2416 -2 706 191 62 136 chr5 51557991 51558368 -148071782 - MLT1A1 LTR MaLR -11 421 5 387 259 122 20 chr5 51558581 51558728 -148071422 + MSTD LTR MaLR 14 175 -221 315 281 97 54 chr5 51559154 51559339 -148070811 + MIR SINE MIR 17 209 -53 225 300 43 0 chr5 51564938 51565008 -148065142 - LTR58 LTR ERV1 -569 110 38 203 319 25 50 chr5 51565550 51565669 -148064481 + MIR SINE MIR 18 133 -75 188 235 0 39 chr5 51565716 51565767 -148064383 + L2 LINE L2 3265 3313 0 816 139 0 0 chr5 51566108 51566223 -148063927 - FLAM_C SINE Alu -16 127 13 446 282 146 82 chr5 51567073 51567353 -148062797 - L2 LINE L2 -10 3262 2965 271 301 84 28 chr5 51567398 51567541 -148062609 - L2 LINE L2 -574 2740 2590 298 264 123 0 chr5 51568103 51568209 -148061941 + MIR SINE MIR 11 129 -133 272 364 14 0 chr5 51569549 51569689 -148060461 - HAL1b LINE L1 -775 573 432 3824 154 92 0 chr5 51570326 51570987 -148059163 + MER72 LTR ERV1 1 722 0 189 107 0 0 chr5 51571055 51571083 -148059067 + (TTC)n Simple_repeat Simple_repeat 3 30 0 182 243 0 27 chr5 51573180 51573217 -148056933 + MIR SINE MIR 20 55 -207 527 294 10 29 chr5 51573499 51573703 -148056447 - MLT1H LTR MaLR -315 234 35 271 255 208 7 chr5 51573753 51573902 -148056248 + MIR SINE MIR 81 259 -3 1354 117 0 6 chr5 51575011 51575191 -148054959 - AluSx SINE Alu -133 179 1 623 269 99 57 chr5 51575918 51576108 -148054042 - L1M4 LINE L1 -1555 4591 4411 1528 183 3 33 chr5 51576108 51576408 -148053742 + AluJb SINE Alu 1 291 -21 623 269 99 57 chr5 51576408 51576589 -148053561 - L1M4 LINE L1 -1735 4411 4204 536 278 62 70 chr5 51576684 51577040 -148053110 + MLT1J LTR MaLR 104 456 -55 234 0 0 0 chr5 51577121 51577147 -148053003 + (T)n Simple_repeat Simple_repeat 1 26 0 7458 11 2 2 chr5 51577195 51578429 -148051721 - L1HS LINE L1 0 6155 4921 900 172 44 11 chr5 51578540 51578720 -148051430 - MER20 DNA MER1_type -33 186 1 198 0 0 0 chr5 51579230 51579252 -148050898 + (TA)n Simple_repeat Simple_repeat 2 23 0 28 71 0 0 chr5 51579299 51579355 -148050795 + AT_rich Low_complexity Low_complexity 1 56 0 313 333 46 35 chr5 51579693 51579867 -148050283 + MIR SINE MIR 2 177 -85 2322 99 3 0 chr5 51579888 51580200 -148049950 + AluSp SINE Alu 1 313 0 976 201 86 32 chr5 51580450 51580728 -148049422 - MLT1A1 LTR MaLR -68 297 5 704 188 0 0 chr5 51581120 51581237 -148048913 + FLAM_C SINE Alu 2 118 -15 238 204 0 0 chr5 51581441 51581495 -148048655 + T-rich Low_complexity Low_complexity 1 54 0 417 86 0 0 chr5 51582359 51582417 -148047733 + (TAG)n Simple_repeat Simple_repeat 2 59 0 22 0 0 0 chr5 51582607 51582629 -148047521 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 51582655 51582685 -148047465 + AT_rich Low_complexity Low_complexity 1 30 0 844 161 0 0 chr5 51583955 51584085 -148046065 + FLAM_C SINE Alu 1 130 -3 1967 65 40 22 chr5 51584469 51584789 -148045361 - AluY SINE Alu 0 325 1 346 257 10 30 chr5 51584840 51584941 -148045209 + MIR SINE MIR 53 151 -111 314 336 28 19 chr5 51585203 51585310 -148044840 + MIR SINE MIR 2 109 -153 343 242 172 0 chr5 51585323 51585422 -148044728 + L2 LINE L2 3195 3310 -3 506 325 55 4 chr5 51585853 51586090 -148044060 + LTR33 LTR ERVL 257 505 -16 234 0 0 0 chr5 51586905 51586931 -148043219 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 15033 31 3 0 chr5 51586931 51589491 -148040659 - L1PA3 LINE L1 -10 6145 3581 776 40 10 0 chr5 51589491 51589592 -148040558 - L1PA3 LINE L1 -4479 1667 1566 25539 46 39 2 chr5 51589599 51593027 -148037123 - L1P LINE L1 -2581 3565 13 382 386 80 25 chr5 51593419 51594022 -148036128 - L2 LINE L2 -532 2782 2147 195 288 0 96 chr5 51594156 51594229 -148035921 - L2 LINE L2 -2131 1183 1118 21 0 0 0 chr5 51594276 51594297 -148035853 + AT_rich Low_complexity Low_complexity 1 21 0 4506 204 29 8 chr5 51594356 51595550 -148034600 + L1 LINE L1 4152 5370 -776 1416 191 23 57 chr5 51596120 51596507 -148033643 - MLT1B LTR MaLR -6 384 11 2425 121 11 3 chr5 51597018 51597390 -148032760 - THE1C LTR MaLR 0 375 1 23 54 0 0 chr5 51597591 51597628 -148032522 + AT_rich Low_complexity Low_complexity 1 37 0 217 332 258 12 chr5 51597660 51597994 -148032156 + L2 LINE L2 2550 2965 -349 1201 241 38 43 chr5 51598211 51598610 -148031540 - MLT2C1 LTR ERVL 0 397 1 673 298 48 29 chr5 51598731 51599043 -148031107 + L2 LINE L2 2996 3313 0 1907 148 3 17 chr5 51600342 51600640 -148029510 + AluJo SINE Alu 12 305 -7 1006 89 30 0 chr5 51600640 51600809 -148029341 + (TA)n Simple_repeat Simple_repeat 2 175 0 21 36 0 0 chr5 51600976 51601004 -148029146 + AT_rich Low_complexity Low_complexity 1 28 0 485 289 180 22 chr5 51601120 51601487 -148028663 + MLT1J1 LTR MaLR 1 425 -21 708 273 39 19 chr5 51601517 51601722 -148028428 + MIR SINE MIR 48 256 -6 417 261 24 99 chr5 51602800 51603172 -148026978 + L1MC4a LINE L1 5696 6039 -1769 1014 136 52 75 chr5 51603329 51603442 -148026708 - MER2 DNA MER2_type -134 211 103 1612 27 0 0 chr5 51603442 51603666 -148026484 - AluY SINE Alu 0 321 98 1014 136 52 75 chr5 51603666 51603764 -148026386 - MER2 DNA MER2_type -242 103 4 1769 104 0 8 chr5 51603803 51604044 -148026106 - AluSg1 SINE Alu -21 288 50 189 171 0 0 chr5 51604397 51604432 -148025718 + GA-rich Low_complexity Low_complexity 2 36 0 28 48 0 0 chr5 51605889 51605931 -148024219 + AT_rich Low_complexity Low_complexity 1 42 0 399 193 0 0 chr5 51606233 51606316 -148023834 + CT-rich Low_complexity Low_complexity 4 86 0 1289 189 48 34 chr5 51606341 51606632 -148023518 - AluJo SINE Alu -5 307 13 221 364 68 11 chr5 51606770 51606858 -148023292 - MIR3 SINE MIR -102 106 14 * 753 278 16 5 chr5 51606851 51607042 -148023108 + MIR SINE MIR 70 262 0 2037 121 7 0 chr5 51607103 51607423 -148022727 + AluSx SINE Alu 1 322 0 218 312 101 28 chr5 51607894 51608003 -148022147 + L2 LINE L2 3148 3264 -8 223 240 0 20 chr5 51608120 51608170 -148021980 - MIR SINE MIR -102 160 112 1928 128 0 0 chr5 51609681 51609947 -148020203 + AluSg SINE Alu 1 266 -44 184 29 29 29 chr5 51610006 51610040 -148020110 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 2593 50 0 0 chr5 51612268 51612566 -148017584 + AluY SINE Alu 1 298 -13 23 0 0 0 chr5 51612573 51612596 -148017554 + AT_rich Low_complexity Low_complexity 1 23 0 316 336 67 18 chr5 51612845 51613172 -148016978 + HsTC2 DNA Tc2 505 847 -1051 21 0 0 0 chr5 51613583 51613604 -148016546 + AT_rich Low_complexity Low_complexity 1 21 0 642 210 56 37 chr5 51616408 51616570 -148013580 - MER20 DNA MER1_type -1 218 54 2319 106 22 30 chr5 51617802 51618169 -148011981 - THE1B LTR MaLR 0 364 1 282 381 25 25 chr5 51618397 51618633 -148011517 - L2 LINE L2 -557 2757 2522 1644 169 17 10 chr5 51718859 51719154 -147910996 - AluJb SINE Alu -13 299 3 348 208 164 18 chr5 51719176 51719332 -147910818 - MIR SINE MIR -63 199 23 271 328 0 38 chr5 51719534 51719717 -147910433 + GA-rich Low_complexity Low_complexity 1 176 0 722 329 79 37 chr5 51720362 51720920 -147909230 + L2 LINE L2 2697 3267 -46 180 0 0 0 chr5 51722005 51722025 -147908125 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 199 163 279 0 chr5 51724906 51724949 -147905201 + L2 LINE L2 3217 3271 -1 473 323 195 10 chr5 51726132 51726445 -147903705 + L3 LINE CR1 865 1235 -342 316 219 55 0 chr5 51726447 51726520 -147903630 - Charlie1 DNA MER1_type -4 2757 2681 9044 117 86 24 chr5 51726528 51728080 -147902070 + Tigger1 DNA MER2_type 1 1649 -769 4554 131 76 4 chr5 51728377 51729111 -147901039 + Tigger1 DNA MER2_type 1632 2418 0 933 226 88 27 chr5 51729111 51729439 -147900711 - Charlie1 DNA MER1_type -87 2674 2327 1071 191 24 0 chr5 51729443 51729653 -147900497 - Charlie1 DNA MER1_type -541 2220 2006 693 124 7 51 chr5 51729659 51729796 -147900354 - L1PA16 LINE L1 -1 6165 6035 244 205 0 103 chr5 51729797 51729875 -147900275 + Charlie1 DNA MER1_type 1949 2018 -743 349 138 299 0 chr5 51729916 51730003 -147900147 - Charlie1 DNA MER1_type -826 1935 1823 1357 171 74 4 chr5 51730048 51730303 -147899847 - MER2 DNA MER2_type 0 345 73 1829 188 58 24 chr5 51730303 51730485 -147899665 + MSTA LTR MaLR 1 175 -253 1885 96 11 0 chr5 51730485 51730745 -147899405 + AluSx SINE Alu 5 267 -45 1829 188 58 24 chr5 51730745 51730940 -147899210 + MSTA LTR MaLR 175 391 -37 1201 73 0 0 chr5 51730940 51731111 -147899039 - AluY SINE Alu 0 303 133 2337 91 0 0 chr5 51731111 51731409 -147898741 - AluY SINE Alu -9 302 5 279 143 0 0 chr5 51731412 51731454 -147898696 + MSTA LTR MaLR 387 428 0 442 195 0 13 chr5 51731454 51731531 -147898619 - MER2 DNA MER2_type -268 77 2 2225 90 7 3 chr5 51731905 51732206 -147897944 - AluSq SINE Alu -11 302 1 724 327 120 20 chr5 51732413 51732820 -147897330 - L2 LINE L2 -350 2964 2517 23 0 0 0 chr5 51733496 51733519 -147896631 + AT_rich Low_complexity Low_complexity 1 23 0 212 196 0 22 chr5 51733899 51733945 -147896205 + A-rich Low_complexity Low_complexity 2 46 0 962 176 78 0 chr5 51735176 51735380 -147894770 - Tigger7 DNA MER2_type -1 2490 2271 * 1769 155 10 14 chr5 51735354 51735645 -147894505 - Tigger7 DNA MER2_type -233 317 28 2491 47 3 0 chr5 51735947 51736246 -147893904 + AluY SINE Alu 1 300 -11 2165 117 3 3 chr5 51736642 51736951 -147893199 + AluSx SINE Alu 1 309 -3 2148 112 3 3 chr5 51736953 51737265 -147892885 + AluSp SINE Alu 1 312 -1 1875 208 69 11 chr5 51737533 51738078 -147892072 + L1M3 LINE L1 5176 5754 -426 208 183 133 33 chr5 51738706 51738766 -147891384 + MIR3 SINE MIR 137 202 -6 2655 158 16 4 chr5 51738885 51739517 -147890633 - L1ME LINE L1 -383 5783 5123 692 281 112 33 chr5 51739795 51740292 -147889858 + MLT1G1 LTR MaLR 1 585 -10 1775 179 0 6 chr5 51740833 51741145 -147889005 - AluJo SINE Alu -2 310 1 332 278 181 32 chr5 51741955 51742203 -147887947 + L1MB3 LINE L1 4549 4833 -1313 291 286 14 64 chr5 51742247 51742387 -147887763 + L1P LINE L1 4879 5011 -1135 276 111 0 0 chr5 51742389 51742434 -147887716 + (CA)n Simple_repeat Simple_repeat 1 45 0 5447 244 39 21 chr5 51742734 51744409 -147885741 + L1MC/D LINE L1 2115 3819 -2327 2598 181 44 29 chr5 51744407 51745041 -147885109 + L1MC/D LINE L1 4637 5308 -1036 * 2018 104 0 47 chr5 51745041 51745358 -147884792 + AluSx SINE Alu 2 303 -9 2598 181 44 29 chr5 51745358 51745757 -147884393 + L1MC/D LINE L1 5308 5699 -645 * 4074 168 15 28 chr5 51745756 51746538 -147883612 + L1MB3 LINE L1 5412 6183 0 708 303 116 33 chr5 51747224 51747266 -147882884 + MLT1I LTR MaLR 3 40 -369 3116 66 45 7 chr5 51747266 51747690 -147882460 - MLT2A1 LTR ERVL 0 444 5 708 303 116 33 chr5 51747690 51747984 -147882166 + MLT1I LTR MaLR 40 367 -42 31 0 0 0 chr5 51748431 51748462 -147881688 + AT_rich Low_complexity Low_complexity 1 31 0 517 250 79 26 chr5 51748753 51748905 -147881245 + MIR SINE MIR 37 196 -66 1406 136 64 34 chr5 51748988 51749253 -147880897 + Tigger1 DNA MER2_type 2146 2418 0 214 360 117 0 chr5 51749272 51749383 -147880767 + L2 LINE L2 2629 2752 -562 1769 142 14 10 chr5 51749416 51749711 -147880439 + AluJb SINE Alu 2 297 -15 22 0 0 0 chr5 51750143 51750165 -147879985 + AT_rich Low_complexity Low_complexity 1 22 0 1984 154 0 0 chr5 51750168 51750467 -147879683 + AluSq SINE Alu 1 299 -14 2210 78 0 11 chr5 51750469 51750789 -147879361 + AluY SINE Alu 1 282 -29 1944 157 0 0 chr5 51750941 51751235 -147878915 + AluSq SINE Alu 6 299 -14 2363 90 0 3 chr5 51751237 51751547 -147878603 + AluY SINE Alu 1 309 -2 2284 118 0 6 chr5 51751698 51752013 -147878137 - AluSq SINE Alu 0 313 1 2406 67 14 0 chr5 51752298 51752595 -147877555 - AluSp SINE Alu -11 302 2 1756 138 24 14 chr5 51752997 51753286 -147876864 + AluSx SINE Alu 1 292 -20 2068 93 57 0 chr5 51753426 51753706 -147876444 + AluSq SINE Alu 1 296 -17 2041 72 91 0 chr5 51754889 51755154 -147874996 + AluY SINE Alu 1 289 -22 292 403 50 31 chr5 51755239 51755398 -147874752 - L2 LINE L2 -9 3263 3102 3010 153 63 40 chr5 51755400 51755805 -147874345 + MER6A DNA MER2_type 1 427 -438 2415 60 0 0 chr5 51755805 51756136 -147874014 - AluY SINE Alu 0 331 1 3010 153 63 40 chr5 51756136 51756312 -147873838 + MER6A DNA MER2_type 427 597 -8 226 341 84 36 chr5 51756326 51756493 -147873657 - L2 LINE L2 -188 3084 2910 2105 124 20 0 chr5 51756933 51757239 -147872911 + AluSp SINE Alu 1 312 -1 613 123 41 41 chr5 51757249 51757420 -147872730 + GA-rich Low_complexity Low_complexity 2 172 0 261 331 47 39 chr5 51757427 51757554 -147872596 - L2 LINE L2 -930 2384 2257 1749 180 120 23 chr5 51757947 51758331 -147871819 - MLT1D LTR MaLR 0 505 85 1315 128 0 39 chr5 51758350 51758553 -147871597 - AluJo SINE Alu -30 282 88 553 81 40 81 chr5 51758554 51758653 -147871497 - MLT1D LTR MaLR -410 95 1 642 312 50 13 chr5 51758883 51759181 -147870969 - L2 LINE L2 -1263 2051 1743 203 234 13 0 chr5 51759240 51759317 -147870833 + GA-rich Low_complexity Low_complexity 2 79 0 418 288 268 15 chr5 51759372 51759570 -147870580 - MIR SINE MIR -13 249 2 314 324 154 12 chr5 51760792 51761051 -147869099 + LTR16C LTR ERVL 193 488 -3 182 346 0 0 chr5 51761059 51761111 -147869039 - L3 LINE CR1 -81 1496 1445 267 323 62 69 chr5 51761504 51761792 -147868358 + MLT1K LTR MaLR 277 562 -26 1616 139 3 52 chr5 51762224 51762548 -147867602 + AluSx SINE Alu 1 308 -4 673 91 8 50 chr5 51762555 51762676 -147867474 + AluSc SINE Alu 1 116 -193 23 0 0 0 chr5 51763624 51763647 -147866503 + AT_rich Low_complexity Low_complexity 1 23 0 186 189 0 0 chr5 51764027 51764064 -147866086 + A-rich Low_complexity Low_complexity 1 37 0 961 172 78 0 chr5 51765308 51765512 -147864638 - Tigger7 DNA MER2_type -1 2490 2271 * 1604 163 10 27 chr5 51765486 51765781 -147864369 - Tigger7 DNA MER2_type -233 317 28 1341 104 0 79 chr5 51766220 51766520 -147863630 + AluY SINE Alu 27 304 0 1806 182 66 37 chr5 51766520 51766717 -147863433 - MSTA LTR MaLR -37 391 201 1930 92 11 0 chr5 51766717 51766977 -147863173 - AluSx SINE Alu -45 267 5 1806 182 66 37 chr5 51766977 51767159 -147862991 - MSTA LTR MaLR -227 201 1 1362 167 74 4 chr5 51767159 51767414 -147862736 + MER2 DNA MER2_type 73 345 0 350 138 299 0 chr5 51767459 51767546 -147862604 + Charlie1 DNA MER1_type 1823 1935 -826 239 205 0 103 chr5 51767587 51767665 -147862485 - Charlie1 DNA MER1_type -743 2018 1949 689 124 7 51 chr5 51767666 51767803 -147862347 + L1PA16 LINE L1 6035 6165 -1 1054 191 24 0 chr5 51767809 51768019 -147862131 + Charlie1 DNA MER1_type 2006 2220 -541 900 229 88 27 chr5 51768023 51768351 -147861799 + Charlie1 DNA MER1_type 2327 2674 -87 4525 130 78 4 chr5 51768351 51769084 -147861066 - Tigger1 DNA MER2_type 0 2418 1632 9034 119 86 24 chr5 51769381 51770934 -147859216 - Tigger1 DNA MER2_type -769 1649 1 293 203 54 14 chr5 51770942 51771016 -147859134 + Charlie1 DNA MER1_type 2681 2757 -4 399 319 198 16 chr5 51771018 51771332 -147858818 - L3 LINE CR1 -342 1235 865 197 163 279 0 chr5 51772518 51772561 -147857589 - L2 LINE L2 -1 3271 3217 180 0 0 0 chr5 51775450 51775470 -147854680 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 590 325 81 52 chr5 51776556 51777122 -147853028 - L2 LINE L2 -46 3267 2697 271 328 0 38 chr5 51777766 51777949 -147852201 + CT-rich Low_complexity Low_complexity 1 176 0 342 208 164 18 chr5 51778151 51778307 -147851843 + MIR SINE MIR 23 199 -63 1659 173 17 10 chr5 51778329 51778624 -147851526 + AluJb SINE Alu 3 299 -13 1849 136 11 4 chr5 51779164 51779444 -147850706 + AluSx SINE Alu 1 282 -30 243 0 0 0 chr5 51779447 51779474 -147850676 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2011 78 34 84 chr5 51779521 51779841 -147850309 + AluSg SINE Alu 1 304 -6 812 224 153 34 chr5 51779909 51780347 -147849803 - L1ME4a LINE L1 -19 6102 5613 566 104 0 104 chr5 51780354 51780469 -147849681 + FLAM_C SINE Alu 32 134 -9 1599 241 54 20 chr5 51781104 51782025 -147848125 - L1MEc LINE L1 -3319 2896 1883 2661 36 3 0 chr5 51782025 51782333 -147847817 - AluY SINE Alu -2 309 1 1599 241 54 20 chr5 51782333 51782480 -147847670 - L1MEc LINE L1 -4332 1883 1742 565 223 102 0 chr5 51783342 51783539 -147846611 + L1MB8 LINE L1 2787 3003 -3143 * 3202 218 97 21 chr5 51783530 51784253 -147845897 + L1MB8 LINE L1 3601 4425 -1721 1673 198 10 19 chr5 51784253 51784566 -147845584 + AluJo SINE Alu 1 310 -2 3202 218 97 21 chr5 51784566 51784866 -147845284 + L1MB8 LINE L1 4425 4701 -1445 1764 174 0 22 chr5 51784870 51785187 -147844963 + AluJo SINE Alu 1 310 -2 543 263 46 14 chr5 51785190 51785201 -147844949 + L1MB8 LINE L1 5023 5032 -1114 2220 81 7 10 chr5 51785201 51785496 -147844654 + AluSg SINE Alu 1 294 -16 543 263 46 14 chr5 51785496 51785701 -147844449 + L1MB8 LINE L1 5032 5246 -900 1031 206 110 61 chr5 51785707 51786201 -147843949 + MER39 LTR ERV1 6 576 -9 4056 179 63 16 chr5 51786202 51787100 -147843050 + L1MB8 LINE L1 5239 6178 0 2062 239 51 48 chr5 51787095 51787159 -147842991 + L1MD2 LINE L1 5422 5484 -682 * 2492 84 0 0 chr5 51787159 51787468 -147842682 + AluSx SINE Alu 1 309 -3 2062 239 51 48 chr5 51787468 51788147 -147842003 + L1MD2 LINE L1 5484 6141 -25 26 0 0 0 chr5 51788147 51788173 -147841977 + AT_rich Low_complexity Low_complexity 1 26 0 528 285 37 42 chr5 51788270 51788484 -147841666 + L3 LINE CR1 1101 1313 -264 299 311 47 9 chr5 51788564 51788670 -147841480 + L3 LINE CR1 1467 1576 -1 302 264 196 27 chr5 51789764 51789912 -147840238 + MER5B DNA MER1_type 6 178 0 26 50 0 0 chr5 51790087 51790127 -147840023 + AT_rich Low_complexity Low_complexity 1 40 0 1784 153 28 59 chr5 51790924 51790995 -147839155 - MER2 DNA MER2_type 0 344 272 2317 94 0 7 chr5 51790995 51791293 -147838857 + AluSg SINE Alu 2 297 -13 1784 153 28 59 chr5 51791293 51791575 -147838575 - MER2 DNA MER2_type -72 272 2 519 284 68 11 chr5 51791576 51791752 -147838398 + MIR SINE MIR 71 256 -6 2266 63 18 3 chr5 51791967 51792251 -147837899 - AluSg SINE Alu -22 288 1 729 309 43 36 chr5 51792811 51793115 -147837035 - MLT1I LTR MaLR -6 403 98 1635 163 47 11 chr5 51793313 51793589 -147836561 + AluSx SINE Alu 1 286 -26 2149 112 0 0 chr5 51794345 51794639 -147835511 + AluSq SINE Alu 5 298 -15 2553 61 0 0 chr5 51794884 51795195 -147834955 - AluY SINE Alu 0 311 1 1639 114 0 0 chr5 51795923 51796151 -147833999 + AluSg/x SINE Alu 85 312 0 4059 191 43 55 chr5 51798529 51799968 -147830182 - L1MD1 LINE L1 -10 6232 4812 762 249 84 45 chr5 51800769 51801078 -147829072 + MLT1L LTR MaLR 285 605 -10 325 333 54 9 chr5 51801230 51801341 -147828809 + L2 LINE L2 3157 3272 0 627 206 59 6 chr5 51802449 51802619 -147827531 - MER104 DNA MER2_type -1 179 1 626 269 112 48 chr5 51802619 51802671 -147827479 + MLT1J LTR MaLR 16 63 -448 198 0 0 0 chr5 51802671 51802693 -147827457 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 626 269 112 48 chr5 51802693 51802971 -147827179 + MLT1J LTR MaLR 63 367 -144 2011 287 80 29 chr5 51802977 51803626 -147826524 + L2 LINE L2 928 1609 -1705 1039 197 21 22 chr5 51803628 51803731 -147826419 + L1MC/D LINE L1 5035 5137 -1067 2122 112 0 14 chr5 51803731 51804037 -147826113 + AluSx SINE Alu 1 302 0 1039 197 21 22 chr5 51804037 51804358 -147825792 + L1MC/D LINE L1 5137 5461 -743 1142 243 142 40 chr5 51804369 51804817 -147825333 + L2 LINE L2 2522 3046 -267 943 251 84 81 chr5 51804817 51805338 -147824812 - LTR33A LTR ERVL 0 523 1 1142 243 142 40 chr5 51805338 51805378 -147824772 + L2 LINE L2 3046 3081 -232 379 317 84 87 chr5 51805635 51806051 -147824099 - LTR67 LTR ERVL -141 416 2 2321 107 0 0 chr5 51806266 51806565 -147823585 - AluSx SINE Alu -13 299 1 22 35 0 0 chr5 51806671 51806700 -147823450 + AT_rich Low_complexity Low_complexity 1 29 0 401 335 40 20 chr5 51806705 51806905 -147823245 - MIR SINE MIR -49 213 10 255 31 0 0 chr5 51806934 51806966 -147823184 + (TG)n Simple_repeat Simple_repeat 2 33 0 960 262 165 20 chr5 51807579 51807657 -147822493 - MLT1J2 LTR MaLR 0 450 385 1852 170 3 0 chr5 51807657 51807951 -147822199 + AluSx SINE Alu 1 295 -17 960 262 165 20 chr5 51807951 51808265 -147821885 - MLT1J2 LTR MaLR -65 385 1 1761 108 67 11 chr5 51808554 51808866 -147821284 - AluSx SINE Alu 0 327 1 1821 174 70 36 chr5 51809114 51809556 -147820594 - LTR2B LTR ERV1 0 490 34 2423 77 0 0 chr5 51809696 51809995 -147820155 - AluY SINE Alu -12 299 1 434 246 63 24 chr5 51810068 51810194 -147819956 + MLT1G1 LTR MaLR 459 589 -6 363 213 0 0 chr5 51810316 51810391 -147819759 + MER94 DNA DNA 60 134 0 23 0 0 0 chr5 51810817 51810840 -147819310 + AT_rich Low_complexity Low_complexity 1 23 0 745 245 69 92 chr5 51810840 51811219 -147818931 - MLT1J2 LTR MaLR -76 374 5 589 196 0 0 chr5 51814962 51815059 -147815091 - FLAM_A SINE Alu -26 116 20 221 240 60 0 chr5 51815341 51815391 -147814759 - MIR SINE MIR -13 249 197 248 231 0 0 chr5 51816921 51816973 -147813177 + LTR30 LTR ERV1 1 52 -670 2395 117 11 70 chr5 51817015 51817469 -147812681 + LTR12 LTR ERV1 55 481 -233 881 234 0 0 chr5 51817563 51817738 -147812412 - FAM SINE Alu 0 175 1 260 219 96 0 chr5 51818021 51818094 -147812056 - L1ME4a LINE L1 -106 6015 5936 325 271 35 49 chr5 51818131 51818275 -147811875 - L1ME4a LINE L1 -461 5660 5519 588 214 25 116 chr5 51818359 51818656 -147811494 + MLT1D LTR MaLR 1 270 -197 580 338 93 20 chr5 51819082 51819604 -147810546 + L1ME4a LINE L1 5354 5919 -202 266 280 53 8 chr5 51819648 51819780 -147810370 + HAL1b LINE L1 1211 1348 0 399 149 0 14 chr5 51820661 51820735 -147809415 - MER3 DNA MER1_type 0 2624 2552 357 186 0 93 chr5 51820751 51820848 -147809302 - MER3 DNA MER1_type -100 109 22 1982 141 0 0 chr5 51821053 51821336 -147808814 + AluSq SINE Alu 1 283 -30 312 27 0 0 chr5 51821787 51821824 -147808326 + (TG)n Simple_repeat Simple_repeat 2 38 0 3382 141 27 31 chr5 51821827 51822464 -147807686 - L1MC1 LINE L1 -9 6324 5691 1229 138 9 27 chr5 51822467 51822692 -147807458 + L1MC1 LINE L1 5468 5688 -645 1197 168 157 87 chr5 51822754 51823124 -147807026 + MSTD LTR MaLR 1 396 0 438 20 0 0 chr5 51824051 51824102 -147806048 + (CA)n Simple_repeat Simple_repeat 2 52 0 2405 59 0 33 chr5 51824103 51824408 -147805742 - AluY SINE Alu -16 295 1 509 138 0 0 chr5 51824535 51824615 -147805535 - MADE1 DNA Mariner 0 80 1 349 390 8 0 chr5 51825126 51825249 -147804901 - L2 LINE L2 -2 3270 3147 2111 110 31 0 chr5 51825658 51825948 -147804202 - AluSc SINE Alu -10 299 1 1947 127 34 14 chr5 51825953 51826245 -147803905 - AluSx SINE Alu -14 298 1 2495 71 0 0 chr5 51826557 51826853 -147803297 - AluY SINE Alu -15 296 1 6170 158 47 69 chr5 51826989 51827486 -147802664 + L1MB3 LINE L1 8 514 -5870 2393 102 0 9 chr5 51827486 51827801 -147802349 - AluSx SINE Alu 0 312 1 6170 158 47 69 chr5 51827801 51827902 -147802248 + L1MB3 LINE L1 514 616 -5768 2029 158 7 0 chr5 51827902 51828199 -147801951 + AluSx SINE Alu 1 299 -13 6170 158 47 69 chr5 51828199 51828733 -147801417 + L1MB3 LINE L1 616 1160 -5224 2138 138 3 0 chr5 51828733 51829031 -147801119 + AluSx SINE Alu 1 299 -13 6170 158 47 69 chr5 51829031 51829150 -147801000 + L1MB3 LINE L1 1160 1280 -5104 2092 135 6 13 chr5 51829150 51829461 -147800689 + AluSq SINE Alu 1 309 -4 6170 158 47 69 chr5 51829461 51829733 -147800417 + L1MB3 LINE L1 1280 1501 -4883 5312 226 37 58 chr5 51829740 51829850 -147800300 + L1MB3 LINE L1 2869 2980 -3402 2566 59 0 3 chr5 51829850 51830157 -147799993 - AluY SINE Alu -5 306 1 5312 226 37 58 chr5 51830157 51830327 -147799823 + L1MB3 LINE L1 2980 3152 -3230 5455 128 20 2 chr5 51830327 51831030 -147799120 + L1PA16 LINE L1 4281 4970 -1196 2341 97 3 0 chr5 51831030 51831328 -147798822 + AluSp SINE Alu 1 299 -14 5455 128 20 2 chr5 51831328 51832481 -147797669 + L1PA16 LINE L1 4970 6160 -6 5312 226 37 58 chr5 51832481 51833659 -147796491 + L1MB3 LINE L1 3152 4277 -2105 2060 130 0 19 chr5 51833659 51833975 -147796175 + AluSg SINE Alu 1 310 0 5312 226 37 58 chr5 51833975 51834534 -147795616 + L1MB3 LINE L1 4277 4846 -1536 300 200 44 33 chr5 51834539 51834629 -147795521 + L1MC4 LINE L1 6613 6703 -1339 25 31 0 0 chr5 51834629 51834661 -147795489 + AT_rich Low_complexity Low_complexity 1 32 0 707 70 35 44 chr5 51834663 51834893 -147795257 + (TA)n Simple_repeat Simple_repeat 1 227 0 4015 160 38 65 chr5 51834893 51836030 -147794120 + L1MB3 LINE L1 4856 6022 -397 1953 162 0 0 chr5 51836030 51836326 -147793824 + AluSx SINE Alu 1 296 -16 4015 160 38 65 chr5 51836326 51836433 -147793717 + L1MB3 LINE L1 6022 6130 -289 5329 143 30 7 chr5 51836433 51836471 -147793679 - L1PA15 LINE L1 -16 6149 6113 2566 127 0 5 chr5 51836471 51836848 -147793302 + THE1C LTR MaLR 1 375 0 5329 143 30 7 chr5 51836848 51838392 -147791758 - L1PA15 LINE L1 -52 6113 4553 4015 160 38 65 chr5 51838392 51838725 -147791425 + L1MB3 LINE L1 6130 6380 -39 1289 191 8 115 chr5 51838744 51839126 -147791024 + MLT1A1 LTR MaLR 25 365 0 579 375 68 11 chr5 51839539 51839920 -147790230 + L2 LINE L2 2571 2973 -341 354 305 48 19 chr5 51840142 51840247 -147789903 + L2 LINE L2 3162 3269 -3 812 177 14 0 chr5 51840633 51840780 -147789370 - MLT1C LTR MaLR 0 467 319 3030 133 51 4 chr5 51840807 51841319 -147788831 + L1PA16 LINE L1 5609 6144 -22 21 57 0 0 chr5 51841324 51841359 -147788791 + AT_rich Low_complexity Low_complexity 1 35 0 252 100 0 0 chr5 51841830 51841870 -147788280 + (GA)n Simple_repeat Simple_repeat 2 41 0 2313 190 79 34 chr5 51841998 51842028 -147788122 + MLT1E3 LTR MaLR 1 28 -596 1629 206 22 8 chr5 51842028 51842387 -147787763 - MLT1A1 LTR MaLR -1 364 1 2313 190 79 34 chr5 51842387 51842940 -147787210 + MLT1E3 LTR MaLR 28 610 -14 20708 155 23 26 chr5 51843197 51843343 -147786807 + L1M1 LINE L1 10 155 -7410 2356 79 3 16 chr5 51843343 51843646 -147786504 - AluSp SINE Alu -12 301 3 20708 155 23 26 chr5 51843646 51844415 -147785735 + L1M1 LINE L1 155 925 -6640 2339 98 0 3 chr5 51844415 51844720 -147785430 + AluSg SINE Alu 1 304 -6 20708 155 23 26 chr5 51844720 51848239 -147781911 + L1M1 LINE L1 925 4430 -3135 3377 99 17 36 chr5 51848241 51848483 -147781667 + L1MA3 LINE L1 5742 5987 -318 1678 154 148 34 chr5 51848483 51848867 -147781283 + MSTA LTR MaLR 1 428 0 8385 153 38 34 chr5 51848869 51849327 -147780823 + MSTA-int LTR MaLR 3 458 -1122 2289 122 3 0 chr5 51849327 51849639 -147780511 + AluSp SINE Alu 1 313 0 8385 153 38 34 chr5 51849639 51850752 -147779398 + MSTA-int LTR MaLR 458 1580 0 2031 155 134 8 chr5 51850752 51851132 -147779018 + MSTA LTR MaLR 1 428 0 3377 99 17 36 chr5 51851132 51851460 -147778690 + L1MA3 LINE L1 5986 6305 0 350 239 97 82 chr5 51851831 51852049 -147778101 + L1MC4a LINE L1 5607 5833 -1975 2368 87 0 10 chr5 51852049 51852361 -147777789 + AluY SINE Alu 2 310 -1 350 239 97 82 chr5 51852361 51852473 -147777677 + L1MC4a LINE L1 5833 5942 -1866 356 200 200 55 chr5 51853094 51853204 -147776946 - FLAM_A SINE Alu 0 133 8 4108 133 11 22 chr5 51855429 51856148 -147774002 + MER50 LTR ERV1 1 711 -23 494 271 26 20 chr5 51856150 51856301 -147773849 - L1MB7 LINE L1 -103 6081 5930 1662 182 19 10 chr5 51857208 51857389 -147772761 - AluJo SINE Alu 0 312 134 297 0 0 0 chr5 51857389 51857422 -147772728 + (TG)n Simple_repeat Simple_repeat 2 34 0 189 0 0 0 chr5 51857421 51857442 -147772708 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 1662 182 19 10 chr5 51857422 51857568 -147772582 - AluJo SINE Alu -178 134 2 235 189 63 63 chr5 51857634 51857729 -147772421 + LTR67 LTR ERVL 39 133 -424 2267 110 0 0 chr5 51857892 51858201 -147771949 + AluY SINE Alu 1 309 -2 30234 41 2 1 chr5 51858352 51863065 -147767085 - L1PA5 LINE L1 -2 6152 1436 633 319 28 16 chr5 51863164 51863418 -147766732 - Charlie8 DNA MER1_type -2160 257 1 289 333 16 8 chr5 51863603 51863726 -147766424 - L2 LINE L2 -1405 1909 1786 1947 162 3 19 chr5 51863760 51863868 -147766282 - AluJb SINE Alu 0 312 204 2031 222 32 56 chr5 51863868 51864436 -147765714 - MLT2B3 LTR ERVL 0 554 1 1947 162 3 19 chr5 51864436 51864642 -147765508 - AluJb SINE Alu -108 204 3 301 165 55 8 chr5 51864684 51864811 -147765339 + (TA)n Simple_repeat Simple_repeat 2 134 0 366 128 32 0 chr5 51865235 51865329 -147764821 + (TA)n Simple_repeat Simple_repeat 2 98 0 208 91 45 0 chr5 51865361 51865405 -147764745 + (TA)n Simple_repeat Simple_repeat 1 46 0 772 257 16 11 chr5 51866342 51866529 -147763621 - MER5A DNA MER1_type -1 188 1 534 330 6 0 chr5 51868144 51868323 -147761827 - MIR SINE MIR -13 249 70 896 223 29 108 chr5 51868632 51869077 -147761073 - L1MC4 LINE L1 0 8042 7633 22 0 0 0 chr5 51869186 51869208 -147760942 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 51869443 51869466 -147760684 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 51871013 51871036 -147759114 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 51871113 51871141 -147759009 + AT_rich Low_complexity Low_complexity 1 28 0 306 73 0 0 chr5 51872028 51872069 -147758081 + (T)n Simple_repeat Simple_repeat 1 41 0 25 31 0 0 chr5 51873222 51873254 -147756896 + AT_rich Low_complexity Low_complexity 1 32 0 211 339 17 17 chr5 51875353 51875468 -147754682 + G-rich Low_complexity Low_complexity 3 117 0 186 43 0 0 chr5 51875497 51875520 -147754630 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 646 118 22 22 chr5 51875791 51875927 -147754223 + GA-rich Low_complexity Low_complexity 1 136 0 216 0 0 0 chr5 51876655 51876679 -147753471 + (T)n Simple_repeat Simple_repeat 1 24 0 200 97 32 0 chr5 51876839 51876870 -147753280 + T-rich Low_complexity Low_complexity 4 35 0 23 78 0 0 chr5 51877380 51877431 -147752719 + GC_rich Low_complexity Low_complexity 1 51 0 25 51 0 0 chr5 51877463 51877502 -147752648 + GC_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr5 51877961 51877997 -147752153 + GC_rich Low_complexity Low_complexity 1 36 0 234 176 0 0 chr5 51878003 51878054 -147752096 + (TG)n Simple_repeat Simple_repeat 1 51 0 219 230 0 80 chr5 51878979 51879079 -147751071 + C-rich Low_complexity Low_complexity 3 94 0 415 317 6 27 chr5 51879499 51879682 -147750468 + CT-rich Low_complexity Low_complexity 2 180 0 225 0 0 0 chr5 51882174 51882199 -147747951 + (TA)n Simple_repeat Simple_repeat 1 25 0 3122 130 50 4 chr5 51883008 51883493 -147746657 - MER84 LTR ERV1 0 507 1 765 165 25 19 chr5 51883581 51883739 -147746411 + MLT1A1 LTR MaLR 207 365 0 1332 227 60 3 chr5 51883785 51884168 -147745982 - L1M4 LINE L1 -1267 4879 4475 316 322 96 28 chr5 51886122 51886430 -147743720 - L2 LINE L2 -218 3054 2719 533 335 10 0 chr5 51886487 51886684 -147743466 - L2 LINE L2 -741 2573 2375 2231 110 7 0 chr5 51887029 51887321 -147742829 + AluSq SINE Alu 2 295 -18 373 337 95 8 chr5 51887545 51887797 -147742353 + L1MC4a LINE L1 7140 7413 -395 241 274 57 76 chr5 51887991 51888148 -147742002 + LTR16C LTR ERVL 325 478 -13 436 287 138 29 chr5 51888557 51888731 -147741419 + L2 LINE L2 2836 3028 -285 857 281 86 39 chr5 51888925 51889331 -147740819 - L1MC4a LINE L1 -824 6984 6560 2167 123 0 3 chr5 51889355 51889657 -147740493 + AluSq SINE Alu 1 301 -12 3743 165 10 42 chr5 51889663 51889704 -147740446 - L1MB7 LINE L1 -11 6173 6132 1758 152 10 14 chr5 51889704 51889993 -147740157 - AluJb SINE Alu -20 292 5 3743 165 10 42 chr5 51889993 51890721 -147739429 - L1MB7 LINE L1 -52 6132 5428 2274 101 17 0 chr5 51891121 51891418 -147738732 - AluSg1 SINE Alu -7 302 1 30 27 0 0 chr5 51891461 51891498 -147738652 + AT_rich Low_complexity Low_complexity 1 37 0 469 233 73 13 chr5 51891821 51891971 -147738179 - L1ME4a LINE L1 0 6121 5963 180 167 0 28 chr5 51892800 51892836 -147737314 + L2 LINE L2 3263 3297 -16 30 59 0 0 chr5 51895288 51895339 -147734811 + AT_rich Low_complexity Low_complexity 1 51 0 212 270 32 0 chr5 51896824 51896887 -147733263 - MIR SINE MIR -14 248 184 1338 151 50 37 chr5 51896918 51897020 -147733130 - L1MC3 LINE L1 -8 7777 7678 2216 120 0 0 chr5 51897020 51897320 -147732830 + AluSx SINE Alu 1 300 -12 1338 151 50 37 chr5 51897320 51897516 -147732634 - L1MC3 LINE L1 -107 7678 7475 381 269 207 0 chr5 51897522 51897667 -147732483 - MIR SINE MIR -74 188 14 208 304 78 29 chr5 51898160 51898262 -147731888 + L2 LINE L2 3207 3313 0 4960 97 12 13 chr5 51898879 51899571 -147730579 - LTR8 LTR ERV1 0 691 1 2068 132 0 7 chr5 51899993 51900348 -147729802 + AluSx SINE Alu 7 312 0 233 220 55 11 chr5 51900737 51900828 -147729322 - L1ME4a LINE L1 -223 5898 5804 213 258 189 30 chr5 51901123 51901255 -147728895 + MER5B DNA MER1_type 26 178 0 279 313 54 0 chr5 51902264 51902376 -147727774 + MIR SINE MIR 145 262 0 201 213 21 0 chr5 51904225 51904272 -147725878 + MIR SINE MIR 92 139 -123 346 296 45 57 chr5 51904747 51904923 -147725227 + L2 LINE L2 2662 2835 -479 260 350 138 24 chr5 51904937 51905060 -147725090 + L2 LINE L2 3136 3272 0 313 346 89 41 chr5 51905219 51905511 -147724639 + L2 LINE L2 2442 2747 -567 291 279 89 13 chr5 51905588 51905667 -147724483 - L2 LINE L2 -3 3310 3226 265 338 35 28 chr5 51905999 51906144 -147724006 + L2 LINE L2 3161 3306 -7 211 114 29 0 chr5 51906770 51906805 -147723345 - L2 LINE L2 -8 3305 3270 241 247 247 0 chr5 51906810 51906899 -147723251 + L2 LINE L2 3162 3272 0 184 273 0 0 chr5 51906964 51907008 -147723142 - L2 LINE L2 -12 3260 3217 * 214 296 49 12 chr5 51906980 51907061 -147723089 - MIR SINE MIR -22 240 157 1920 141 0 67 chr5 51908816 51909143 -147721007 - AluJo SINE Alu -7 305 1 190 326 21 21 chr5 51909203 51909298 -147720852 - L2 LINE L2 -780 2534 2440 532 269 110 14 chr5 51909349 51909568 -147720582 - L2 LINE L2 -1 3312 3073 195 296 0 0 chr5 51909693 51909747 -147720403 - L2 LINE L2 -1041 2273 2220 212 59 29 0 chr5 51910690 51910724 -147719426 + (CAA)n Simple_repeat Simple_repeat 1 35 0 428 95 119 24 chr5 51911292 51911376 -147718774 - AluSg/x SINE Alu -14 295 204 586 74 0 0 chr5 51911409 51911490 -147718660 - AluSc SINE Alu -228 81 1 333 218 0 13 chr5 51913587 51913665 -147716485 - MER116 DNA Mariner -3 77 1 1513 156 27 16 chr5 51914214 51914471 -147715679 + AluJo SINE Alu 1 260 -52 2201 99 3 0 chr5 51914594 51914907 -147715243 + AluSp SINE Alu 1 314 0 366 123 0 0 chr5 51915007 51915064 -147715086 + (GA)n Simple_repeat Simple_repeat 2 58 0 1309 201 10 97 chr5 51916428 51916642 -147713508 - L1MA10 LINE L1 -7 6327 6163 2192 103 0 3 chr5 51916642 51916934 -147713216 + AluSc SINE Alu 3 293 -16 1309 201 10 97 chr5 51916934 51917123 -147713027 - L1MA10 LINE L1 -171 6163 5959 458 205 17 60 chr5 51917243 51917360 -147712790 - L1PA16 LINE L1 -23 6143 6032 366 91 0 0 chr5 51917713 51917768 -147712382 + (TG)n Simple_repeat Simple_repeat 2 56 0 23 0 0 0 chr5 51918892 51918915 -147711235 + AT_rich Low_complexity Low_complexity 1 23 0 1935 149 19 10 chr5 51920070 51920378 -147709772 + AluJb SINE Alu 1 311 -1 776 228 11 54 chr5 51921205 51921389 -147708761 - MER5B DNA MER1_type -2 176 1 770 310 18 22 chr5 51921502 51921731 -147708419 - MIR SINE MIR -34 228 1 740 183 39 44 chr5 51921952 51922132 -147708018 - MER20 DNA MER1_type -6 213 35 569 303 84 0 chr5 51922230 51922468 -147707682 - MARNA DNA Mariner -51 535 278 417 323 0 85 chr5 51922996 51923041 -147707109 + MER5B DNA MER1_type 3 50 -128 215 91 0 23 chr5 51923041 51923085 -147707065 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 417 323 0 85 chr5 51923085 51923102 -147707048 + MER5B DNA MER1_type 50 67 -111 2159 121 0 0 chr5 51923102 51923412 -147706738 + AluSx SINE Alu 2 311 0 417 323 0 85 chr5 51923412 51923534 -147706616 + MER5B DNA MER1_type 67 175 -3 234 382 13 0 chr5 51923712 51923788 -147706362 - MIR SINE MIR -152 110 34 454 211 263 31 chr5 51923934 51924128 -147706022 - MIR SINE MIR -17 245 7 924 143 98 30 chr5 51924148 51924351 -147705799 + MER20 DNA MER1_type 1 217 -2 247 211 0 0 chr5 51924669 51924721 -147705429 + T-rich Low_complexity Low_complexity 1 52 0 292 210 198 0 chr5 51925880 51925961 -147704189 + L2 LINE L2 3217 3313 0 2215 123 0 0 chr5 51926672 51926980 -147703170 + AluSx SINE Alu 1 308 -4 254 91 0 0 chr5 51927180 51927213 -147702937 - MER46C DNA MER2_type -227 111 79 * 306 280 47 19 chr5 51927211 51927318 -147702832 - MER46C DNA MER2_type -225 113 4 3591 152 33 23 chr5 51927625 51928269 -147701881 - MER39B LTR ERV1 0 653 4 403 340 142 31 chr5 51928320 51928744 -147701406 + L2 LINE L2 2199 2669 -645 243 314 0 12 chr5 51928938 51929024 -147701126 + Tigger6 DNA MER2_type 2 86 -1511 517 268 80 7 chr5 51930132 51930434 -147699716 - L1ME4a LINE L1 -225 5896 5573 390 237 189 11 chr5 51930447 51930665 -147699485 - L1ME4a LINE L1 -710 5532 5274 204 343 71 20 chr5 51930679 51930778 -147699372 - L2 LINE L2 -1 3271 3168 189 107 0 0 chr5 51932254 51932282 -147697868 + (T)n Simple_repeat Simple_repeat 1 28 0 235 267 0 0 chr5 51933231 51933276 -147696874 + L2 LINE L2 3250 3294 -19 1064 162 39 15 chr5 51933375 51933579 -147696571 - MER20 DNA MER1_type -8 211 3 286 368 136 0 chr5 51933883 51934038 -147696112 + MIR3 SINE MIR 3 178 -30 894 233 5 21 chr5 51935812 51936001 -147694149 + MER5A DNA MER1_type 1 186 -3 313 265 219 27 chr5 51936961 51937180 -147692970 + MIR SINE MIR 2 262 0 2090 195 88 29 chr5 51937984 51938496 -147691654 + MLT1F LTR MaLR 1 542 0 25 51 0 0 chr5 51939546 51939585 -147690565 + AT_rich Low_complexity Low_complexity 1 39 0 306 91 0 0 chr5 51940220 51940264 -147689886 - MER58 DNA MER1_type -4 2416 2373 1138 195 15 50 chr5 51940370 51940631 -147689519 - MLT1A2 LTR MaLR -122 252 1 3990 196 82 13 chr5 51940711 51941690 -147688460 - L1MB4 LINE L1 -6 6174 5265 2165 100 4 0 chr5 51941690 51941999 -147688151 - AluSg SINE Alu 0 310 1 3990 196 82 13 chr5 51941999 51942909 -147687241 - L1MB4 LINE L1 -915 5265 4046 1475 173 73 11 chr5 51942936 51943208 -147686942 - AluJo SINE Alu -1 311 23 648 252 106 47 chr5 51943237 51943829 -147686321 - L1MDa LINE L1 -4771 1444 863 29341 91 5 8 chr5 51943872 51949164 -147680986 - L1PA7 LINE L1 -3 6151 877 8702 133 114 5 chr5 51949271 51950898 -147679252 - L1P3 LINE L1 -4660 1791 6 479 309 32 44 chr5 51951211 51951551 -147678599 - L1MDa LINE L1 -5994 402 67 1108 200 86 49 chr5 51951967 51952465 -147677685 + MER39 LTR ERV1 8 687 -6 180 0 0 0 chr5 51953279 51953299 -147676851 + (TTCTG)n Simple_repeat Simple_repeat 2 21 0 220 148 98 0 chr5 51953306 51953367 -147676783 + CT-rich Low_complexity Low_complexity 5 71 0 543 218 0 10 chr5 51953369 51953470 -147676680 - FLAM_A SINE Alu -33 109 10 1945 118 7 7 chr5 51953633 51953913 -147676237 + AluSq SINE Alu 1 280 -33 210 37 0 0 chr5 51953913 51953940 -147676210 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 1502 195 22 35 chr5 51953965 51954278 -147675872 + AluJb SINE Alu 3 311 -1 394 208 0 0 chr5 51954699 51954771 -147675379 - MER39 LTR ERV1 -30 677 606 651 211 0 16 chr5 51954784 51954912 -147675238 - FLAM_A SINE Alu -7 126 1 7656 182 83 31 chr5 51954941 51955359 -147674791 - LTR49-int LTR ERV1 -326 4610 4215 1901 171 91 15 chr5 51955359 51955757 -147674393 + MSTA LTR MaLR 1 428 0 7656 182 83 31 chr5 51955757 51957167 -147672983 - LTR49-int LTR ERV1 -721 4215 2703 1397 149 41 4 chr5 51957176 51957445 -147672705 + L1PA13 LINE L1 5883 6161 -2 1410 202 109 106 chr5 51957445 51958297 -147671853 - LTR49-int LTR ERV1 -2395 2541 1687 333 250 117 33 chr5 51958313 51958433 -147671717 - LTR57-int LTR ERVL -3832 1511 1382 277 226 176 29 chr5 51958544 51958646 -147671504 - MER67D LTR ERV1 -294 220 104 1058 216 84 81 chr5 51958691 51959085 -147671065 - LTR49-int LTR ERV1 -4064 872 478 2463 156 22 29 chr5 51959085 51959502 -147670648 - MSTB1 LTR MaLR 0 432 19 327 264 209 7 chr5 51959588 51959736 -147670414 - LTR49-int LTR ERV1 -5638 693 516 236 296 174 0 chr5 51959743 51959841 -147670309 + L2 LINE L2 3197 3311 -2 195 232 347 11 chr5 51959915 51960010 -147670140 - MIR SINE MIR -121 141 15 24 0 0 0 chr5 51961937 51961961 -147668189 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 51963157 51963179 -147666971 + AT_rich Low_complexity Low_complexity 1 22 0 958 55 79 0 chr5 51964008 51964135 -147666015 + MER85 DNA T2_type 1 137 -2 1373 141 157 23 chr5 51965416 51965715 -147664435 + MER44D DNA MER2_type 1 609 0 21 0 0 0 chr5 51965796 51965817 -147664333 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 51965904 51965929 -147664221 + AT_rich Low_complexity Low_complexity 1 25 0 1551 192 3 16 chr5 51965936 51966244 -147663906 - AluJo SINE Alu -8 304 1 503 241 123 54 chr5 51967337 51967540 -147662610 + MER20 DNA MER1_type 1 217 -2 409 271 60 7 chr5 51967642 51967793 -147662357 + MLT1E LTR MaLR 1 159 -434 4229 147 89 5 chr5 51967930 51968694 -147661456 - L1PA16 LINE L1 -1 6165 5338 1531 211 45 48 chr5 51968995 51969483 -147660667 - MER39 LTR ERV1 0 707 23 31 26 0 0 chr5 51969900 51969938 -147660212 + AT_rich Low_complexity Low_complexity 1 38 0 34 72 0 0 chr5 51970201 51970270 -147659880 + AT_rich Low_complexity Low_complexity 1 69 0 2409 56 7 7 chr5 51970491 51970796 -147659354 - AluY SINE Alu -6 305 1 260 204 21 65 chr5 51972387 51972480 -147657670 - L1ME4a LINE L1 -97 6024 5936 343 286 109 0 chr5 51972490 51972637 -147657513 - L1M4 LINE L1 -1674 4472 4310 260 204 21 65 chr5 51974459 51974552 -147655598 - L1ME4a LINE L1 -97 6024 5936 380 270 177 23 chr5 51974580 51974925 -147655225 - L1M4 LINE L1 -1694 4452 4055 1156 208 47 59 chr5 51975935 51976362 -147653788 - L1ME3A LINE L1 0 6170 5666 273 274 151 0 chr5 51977022 51977128 -147653022 - L1ME LINE L1 -5943 127 6 2256 112 0 0 chr5 51978442 51978745 -147651405 + AluSx SINE Alu 5 307 -5 180 0 0 0 chr5 51979577 51979597 -147650553 + (A)n Simple_repeat Simple_repeat 1 20 0 478 288 0 35 chr5 51979919 51980087 -147650063 - L3 LINE CR1 -535 1042 881 351 292 156 13 chr5 51980087 51980241 -147649909 + MIR SINE MIR 2 177 -85 302 239 401 12 chr5 51980589 51980756 -147649394 + MIR SINE MIR 4 235 -27 16733 33 5 3 chr5 51980798 51983606 -147646544 - L1PA4 LINE L1 -1 6154 3336 24466 58 3 4 chr5 51983613 51986764 -147643386 - L1PA4 LINE L1 -2995 3151 4 353 285 32 65 chr5 51987302 51987425 -147642725 + L2 LINE L2 3152 3270 -2 1963 162 7 0 chr5 51987448 51987756 -147642394 + AluSx SINE Alu 3 312 0 2289 62 3 62 chr5 51987976 51988296 -147641854 + AluSp SINE Alu 1 301 -12 277 299 25 76 chr5 51988516 51988673 -147641477 + MIR3 SINE MIR 21 169 -39 219 216 39 20 chr5 51988936 51988987 -147641163 - L3 LINE CR1 -568 1009 958 1869 116 32 39 chr5 51989269 51989553 -147640597 - AluSx SINE Alu -30 282 1 341 233 155 9 chr5 51989640 51989756 -147640394 - MIR SINE MIR -31 231 99 757 209 32 6 chr5 51989790 51989948 -147640202 + MER58B DNA MER1_type 179 340 -1 190 228 174 65 chr5 51990416 51990508 -147639642 - L2 LINE L2 -3 3269 3168 1226 158 161 0 chr5 51991106 51991385 -147638765 + MER33 DNA MER1_type 1 324 0 872 193 153 40 chr5 51993029 51993402 -147636748 - LTR37A LTR ERV1 -4 422 8 637 232 90 26 chr5 51993403 51993636 -147636514 - MER31-int LTR ERV1 -762 5569 5322 206 309 15 44 chr5 51993652 51993720 -147636430 - MER5A DNA MER1_type -87 102 37 450 179 21 103 chr5 51994009 51994154 -147635996 - MER31-int LTR ERV1 -1987 2949 2817 275 225 50 0 chr5 51994697 51994777 -147635373 - MER31-int LTR ERV1 -3021 1915 1832 1364 241 91 21 chr5 51994789 51995209 -147634941 - MER39 LTR ERV1 0 707 259 260 242 44 22 chr5 51995189 51995280 -147634870 - LTR48B LTR ERV1 -551 93 1 * 486 127 0 0 chr5 51995324 51995403 -147634747 + HY3 scRNA scRNA 22 100 -1 21 0 0 0 chr5 51995403 51995424 -147634726 + AT_rich Low_complexity Low_complexity 1 21 0 296 222 103 16 chr5 51995636 51995762 -147634388 - MER31-int LTR ERV1 -3490 1446 1310 2483 56 0 3 chr5 51995949 51996253 -147633897 - AluY SINE Alu -8 303 1 322 221 51 101 chr5 51996254 51996412 -147633738 - MER31-int LTR ERV1 -3714 1222 1073 656 206 70 44 chr5 51996789 51997017 -147633133 - LTR37A LTR ERV1 -1 425 192 2664 197 73 7 chr5 51997057 51997620 -147632530 + MER82 DNA MER2_type 2 601 -52 320 244 57 65 chr5 52000894 52001017 -147629133 + MIR SINE MIR 48 169 -93 4840 33 3 5 chr5 52001065 52001647 -147628503 + L1PA3 LINE L1 5575 6155 0 298 137 39 0 chr5 52001692 52001743 -147628407 + L2 LINE L2 2909 2961 -353 206 205 0 0 chr5 52001918 52001957 -147628193 - MIR SINE MIR 0 262 224 659 263 50 0 chr5 52001963 52002123 -147628027 + MIR SINE MIR 1 168 -94 183 225 183 0 chr5 52002180 52002251 -147627899 - MIR SINE MIR -39 223 140 221 320 197 6 chr5 52002863 52003041 -147627109 + L3b LINE CR1 1117 1328 -255 374 291 50 21 chr5 52003156 52003297 -147626853 - MER5A DNA MER1_type -1 188 44 210 261 0 0 chr5 52003424 52003470 -147626680 + (CATA)n Simple_repeat Simple_repeat 3 48 0 22 56 0 0 chr5 52004449 52004485 -147625665 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 52004650 52004674 -147625476 + AT_rich Low_complexity Low_complexity 1 24 0 581 240 6 78 chr5 52004789 52004898 -147625252 - MIR SINE MIR -76 186 93 1439 168 6 102 chr5 52004898 52005220 -147624930 + AluJo SINE Alu 1 291 -21 581 240 6 78 chr5 52005220 52005289 -147624861 - MIR SINE MIR -169 93 21 230 315 0 0 chr5 52005561 52005634 -147624516 + L1M3 LINE L1 5695 5767 -401 1943 244 8 47 chr5 52005847 52006249 -147623901 - L1PA4 LINE L1 0 6155 5770 7216 41 21 2 chr5 52006252 52007524 -147622626 - L1PA3 LINE L1 0 6155 4873 12572 35 1 0 chr5 52007526 52009109 -147621041 + L1PA3 LINE L1 3301 4885 -1261 25 0 0 0 chr5 52009214 52009239 -147620911 + AT_rich Low_complexity Low_complexity 1 25 0 6054 88 35 5 chr5 52009399 52010574 -147619576 + L1PA11 LINE L1 4954 6174 0 738 153 15 15 chr5 52010637 52010768 -147619382 + FLAM_C SINE Alu 2 132 -1 5395 168 77 24 chr5 52010776 52010867 -147619283 + L1 LINE L1 2835 2920 -3226 1608 150 13 85 chr5 52010867 52011173 -147618977 + AluJb SINE Alu 2 285 -27 5395 168 77 24 chr5 52011173 52012387 -147617763 + L1 LINE L1 2920 4209 -1937 4704 109 89 34 chr5 52012458 52013429 -147616721 - Tigger3b DNA MER2_type 0 1231 208 271 127 32 0 chr5 52013431 52013494 -147616656 + (TA)n Simple_repeat Simple_repeat 1 65 0 1270 143 0 62 chr5 52013500 52013724 -147616426 + AluSx SINE Alu 64 273 -39 199 104 42 0 chr5 52013827 52013875 -147616275 + (TA)n Simple_repeat Simple_repeat 1 50 0 1947 137 0 42 chr5 52013876 52014182 -147615968 - AluSx SINE Alu -19 293 1 1017 216 39 0 chr5 52014182 52014386 -147615764 - Tigger3b DNA MER2_type -1019 212 1 694 188 11 65 chr5 52014401 52014677 -147615473 + L1 LINE L1 4239 4499 -1647 2537 206 36 21 chr5 52014741 52015461 -147614689 + L1MA9 LINE L1 2478 3208 -4358 1130 186 45 5 chr5 52015789 52016010 -147614140 + MSTB LTR MaLR 197 426 0 6243 245 85 20 chr5 52016013 52017350 -147612800 + L1MA9 LINE L1 3537 4786 -2945 2254 123 7 0 chr5 52017350 52017658 -147612492 + AluSx SINE Alu 1 310 -2 6243 245 85 20 chr5 52017658 52020219 -147609931 + L1MA9 LINE L1 4786 7710 -21 1737 123 74 0 chr5 52020283 52020607 -147609543 + L1MA8 LINE L1 5938 6285 -6 6865 59 8 1 chr5 52020607 52022016 -147608134 - L1PA6 LINE L1 -5 6149 4745 25 0 0 0 chr5 52023184 52023209 -147606941 + AT_rich Low_complexity Low_complexity 1 25 0 509 176 0 70 chr5 52023216 52023358 -147606792 - FRAM SINE Alu -8 168 37 16613 64 9 5 chr5 52025025 52027992 -147602158 - L1PA6 LINE L1 -139 6015 3041 30942 91 15 11 chr5 52028093 52032752 -147597398 - L1P LINE L1 -1458 4688 12 550 288 70 19 chr5 52032792 52033007 -147597143 + MLT1A2 LTR MaLR 100 325 -49 20352 181 41 29 chr5 52033201 52039590 -147590560 - L1PA11 LINE L1 -4 6485 1 532 168 32 0 chr5 52039633 52039728 -147590422 + MSTA LTR MaLR 9 106 -322 4790 111 48 82 chr5 52040240 52041980 -147588170 + L1PA16 LINE L1 4428 6157 -9 30 27 0 0 chr5 52041980 52042017 -147588133 + AT_rich Low_complexity Low_complexity 1 37 0 27028 127 14 57 chr5 52042143 52048611 -147581539 + L1PA8 LINE L1 2 6187 0 1280 249 130 15 chr5 52048636 52049175 -147580975 - L1MC4 LINE L1 -316 7726 7126 1474 202 102 41 chr5 52050052 52050637 -147579513 + MER39 LTR ERV1 7 691 -16 7929 120 5 30 chr5 52050637 52051953 -147578197 + HSMAR1 DNA Mariner 1 1283 -4 1474 202 102 41 chr5 52051953 52051971 -147578179 + MER39 LTR ERV1 691 706 -1 1266 220 83 17 chr5 52052077 52052427 -147577723 - MLT1D LTR MaLR 0 505 133 737 167 9 0 chr5 52052583 52052697 -147577453 + FLAM_C SINE Alu 1 115 -18 207 196 0 22 chr5 52053117 52053163 -147576987 - L2 LINE L2 -6 3307 3263 1476 140 61 25 chr5 52053366 52053644 -147576506 + MER21A LTR ERV1 21 308 -623 1828 140 159 11 chr5 52053649 52054021 -147576129 + MSTA LTR MaLR 1 427 -1 2462 184 60 67 chr5 52054021 52054652 -147575498 + MER21A LTR ERV1 303 929 -2 1546 138 161 0 chr5 52055483 52055743 -147574407 + AluJb SINE Alu 1 302 0 23 68 0 0 chr5 52056019 52056063 -147574087 + AT_rich Low_complexity Low_complexity 1 44 0 293 233 0 0 chr5 52056075 52056135 -147574015 - Charlie1 DNA MER1_type -4 2757 2698 768 275 29 43 chr5 52056149 52056523 -147573627 + L1MCb LINE L1 3 371 -5674 547 156 0 0 chr5 52056527 52056623 -147573527 + L1MB2 LINE L1 6038 6133 -38 1582 161 8 4 chr5 52056623 52056872 -147573278 + AluSx SINE Alu 1 250 -62 824 250 95 60 chr5 52057025 52057435 -147572715 + L1MC4a LINE L1 4405 4844 -1302 2340 130 71 22 chr5 52057435 52057843 -147572307 + MSTA LTR MaLR 1 428 0 824 250 95 60 chr5 52057843 52058020 -147572130 + L1MC4a LINE L1 4844 5013 -1133 222 174 0 0 chr5 52058026 52058072 -147572078 + GA-rich Low_complexity Low_complexity 1 46 0 2462 260 59 97 chr5 52058163 52060243 -147569907 + L1MC4a LINE L1 5099 7108 -700 746 264 38 64 chr5 52060268 52060613 -147569537 + L1MEc LINE L1 13 348 -6511 1452 277 66 18 chr5 52060799 52061884 -147568266 + L1MEc LINE L1 749 1935 -4953 * 9324 91 15 2 chr5 52061883 52063293 -147566857 - L1PA7 LINE L1 -844 5302 3875 6139 67 32 5 chr5 52063293 52064096 -147566054 + L1PA7 LINE L1 5313 6143 -11 1593 202 49 15 chr5 52064674 52065181 -147564969 + L1MEc LINE L1 1899 2429 -4529 2082 138 0 10 chr5 52065181 52065479 -147564671 + AluSx SINE Alu 10 304 -8 1593 202 49 15 chr5 52065479 52065617 -147564533 + L1MEc LINE L1 2429 2561 -4397 * 13775 198 18 30 chr5 52065607 52071289 -147558861 + L1PB3 LINE L1 686 6521 -349 264 59 0 0 chr5 52071289 52071323 -147558827 + (CA)n Simple_repeat Simple_repeat 1 34 0 13775 198 18 30 chr5 52071323 52071648 -147558502 + L1PB3 LINE L1 6521 6848 -22 21 0 0 0 chr5 52071668 52071689 -147558461 + AT_rich Low_complexity Low_complexity 1 21 0 1158 226 113 24 chr5 52073167 52073716 -147556434 + L1M1 LINE L1 3032 3629 -3936 5174 202 78 6 chr5 52073738 52075158 -147554992 + L1M1 LINE L1 3735 5256 -2309 1022 240 5 0 chr5 52075159 52075363 -147554787 - AluJo SINE Alu -107 205 1 3197 222 44 45 chr5 52075390 52076649 -147553501 + L1MEc LINE L1 2664 3897 -3060 583 219 31 12 chr5 52076662 52076822 -147553328 + L1MB7 LINE L1 6008 6170 -14 573 235 53 16 chr5 52076834 52077021 -147553129 + L1MC4 LINE L1 7195 7388 -654 7294 148 57 29 chr5 52077030 52078497 -147551653 + L1PA6 LINE L1 11 1519 -4627 5100 125 24 33 chr5 52078497 52079486 -147550664 - MER11C LTR ERVK 0 1071 1 26685 74 4 7 chr5 52079487 52082305 -147547845 + L1PA6 LINE L1 1515 4311 -1843 2173 116 7 13 chr5 52082305 52082615 -147547535 + AluY SINE Alu 1 308 -3 26685 74 4 7 chr5 52082615 52084450 -147545700 + L1PA6 LINE L1 4311 6151 -3 1888 104 4 0 chr5 52084760 52085010 -147545140 - AluSg SINE Alu -14 296 46 793 193 14 7 chr5 52085011 52085151 -147544999 + AluJb SINE Alu 153 293 -19 489 258 0 25 chr5 52085186 52085306 -147544844 + L2 LINE L2 3197 3313 0 215 219 0 0 chr5 52085826 52085867 -147544283 + MIR3 SINE MIR 120 160 -48 2338 182 20 61 chr5 52085925 52086449 -147543701 - MLT2B3 LTR ERVL -9 545 44 1538 152 164 0 chr5 52086449 52086772 -147543378 - MSTA LTR MaLR 0 428 53 300 82 20 0 chr5 52086800 52086849 -147543301 - MLT2B3 LTR ERVL -504 50 1 288 143 71 0 chr5 52086863 52086919 -147543231 + Charlie8 DNA MER1_type 72 131 -2286 386 220 121 0 chr5 52087242 52087333 -147542817 - MER5A DNA MER1_type -77 112 11 537 289 13 19 chr5 52087379 52087538 -147542612 - MER5B DNA MER1_type -20 158 1 2141 118 10 3 chr5 52087543 52087847 -147542303 + AluSc SINE Alu 1 306 -3 342 322 91 0 chr5 52089447 52089568 -147540582 - L2 LINE L2 -9 3263 3132 684 285 52 25 chr5 52089684 52090052 -147540098 - HAL1b LINE L1 -641 707 330 242 114 0 0 chr5 52090196 52090231 -147539919 - U2 snRNA snRNA -153 35 1 208 230 50 100 chr5 52090750 52090850 -147539300 - MER5A DNA MER1_type -23 166 72 236 259 17 0 chr5 52093149 52093207 -147536943 + L2 LINE L2 3255 3313 0 664 236 149 0 chr5 52093654 52093815 -147536335 + MER5A DNA MER1_type 4 188 -1 470 168 62 62 chr5 52093816 52093929 -147536221 - MER5A DNA MER1_type -68 121 9 216 97 0 0 chr5 52093979 52094010 -147536140 + (CCA)n Simple_repeat Simple_repeat 2 32 0 463 288 59 29 chr5 52094070 52094240 -147535910 - MER5B DNA MER1_type -3 175 1 447 19 0 0 chr5 52097212 52097264 -147532886 + (CA)n Simple_repeat Simple_repeat 2 53 0 229 297 14 0 chr5 52097788 52097862 -147532288 + MLT1K LTR MaLR 168 242 -346 1662 184 34 0 chr5 52098560 52098854 -147531296 + AluJo SINE Alu 1 304 -8 324 120 0 0 chr5 52100390 52100440 -147529710 + (TG)n Simple_repeat Simple_repeat 2 51 0 3447 160 18 0 chr5 52101193 52101806 -147528344 + L1MB2 LINE L1 5546 6169 -2 297 333 124 0 chr5 52104404 52104581 -147525569 - MIR SINE MIR 0 262 64 502 291 111 0 chr5 52105051 52105223 -147524927 + MIR SINE MIR 72 262 0 1138 120 83 46 chr5 52105307 52105524 -147524626 - THE1B LTR MaLR -2 362 138 1041 153 11 11 chr5 52105524 52105707 -147524443 + L1MC1 LINE L1 6150 6332 -1 2291 85 7 14 chr5 52105866 52106160 -147523990 + AluY SINE Alu 1 292 -19 27 29 0 0 chr5 52106173 52106207 -147523943 + AT_rich Low_complexity Low_complexity 1 34 0 669 225 0 23 chr5 52106294 52106423 -147523727 - FLAM_A SINE Alu -7 126 1 2662 188 87 101 chr5 52106576 52106793 -147523357 + L1MC5 LINE L1 6613 6832 -1129 2157 200 29 4 chr5 52106793 52107249 -147522901 + MLT1C LTR MaLR 1 467 0 2662 188 87 101 chr5 52107249 52107388 -147522762 + L1MC5 LINE L1 6832 6971 -990 2339 106 0 3 chr5 52107388 52107699 -147522451 - AluSg SINE Alu 0 310 1 2662 188 87 101 chr5 52107699 52107717 -147522433 + L1MC5 LINE L1 6971 6988 -973 2036 117 0 3 chr5 52107717 52108027 -147522123 - AluSg SINE Alu 0 309 1 2662 188 87 101 chr5 52108027 52108226 -147521924 + L1MC5 LINE L1 6988 7188 -773 2507 80 6 0 chr5 52108226 52108537 -147521613 + AluSq SINE Alu 1 313 0 2662 188 87 101 chr5 52108537 52109291 -147520859 + L1MC5 LINE L1 7188 7925 -36 2227 89 0 51 chr5 52109329 52109644 -147520506 + AluSg SINE Alu 1 299 -11 3116 200 49 50 chr5 52110931 52112126 -147518024 + L1ME1 LINE L1 4973 6161 -5 237 154 0 0 chr5 52112272 52112311 -147517839 + Alu SINE Alu 131 169 -134 6035 104 226 87 chr5 52112311 52113800 -147516350 + pTR5 LTR ERV1 743 2438 0 673 146 0 9 chr5 52113803 52113913 -147516237 + AluJo SINE Alu 31 139 -173 236 167 0 19 chr5 52113913 52113967 -147516183 + L1MCa LINE L1 65 117 -6309 * 12776 199 32 31 chr5 52113965 52115694 -147514456 + L1M2 LINE L1 414 2139 -4874 2207 128 0 0 chr5 52115694 52115999 -147514151 + AluSg SINE Alu 1 305 -5 12776 199 32 31 chr5 52115999 52118757 -147511393 + L1M2 LINE L1 2139 5201 -1812 207 0 0 0 chr5 52118757 52118780 -147511370 + (TAA)n Simple_repeat Simple_repeat 2 24 0 12776 199 32 31 chr5 52118780 52119988 -147510162 + L1M2 LINE L1 5201 6406 -607 715 153 80 7 chr5 52119999 52120136 -147510014 - L1MCa LINE L1 -5757 669 523 4536 199 84 13 chr5 52120140 52120385 -147509765 + L1MCa LINE L1 1352 1578 -4848 252 0 0 0 chr5 52120385 52120413 -147509737 + (CA)n Simple_repeat Simple_repeat 2 29 0 4536 199 84 13 chr5 52120413 52121875 -147508275 + L1MCa LINE L1 1578 3287 -3139 7376 37 1 2 chr5 52121875 52122876 -147507274 + L1PA3 LINE L1 5153 6152 -3 4536 199 84 13 chr5 52122876 52123582 -147506568 + L1MCa LINE L1 3287 3941 -2485 225 0 0 0 chr5 52123582 52123607 -147506543 + (TTTTTA)n Simple_repeat Simple_repeat 4 28 0 16723 70 12 1 chr5 52123937 52126991 -147503159 - L1PA6 LINE L1 -4 6150 3075 4263 130 7 9 chr5 52127091 52127782 -147502368 + HSMAR1 DNA Mariner 594 1283 -4 1289 217 83 17 chr5 52127906 52128256 -147501894 - MLT1D LTR MaLR 0 505 133 739 183 0 0 chr5 52128412 52128527 -147501623 + FLAM_C SINE Alu 1 115 -18 12692 78 7 2 chr5 52128892 52130746 -147499404 - L1P LINE L1 -2206 3940 2078 15519 58 3 3 chr5 52130846 52133627 -147496523 + L1PA6 LINE L1 3358 6151 -3 1888 104 4 0 chr5 52133937 52134187 -147495963 - AluSg SINE Alu -14 296 46 793 193 14 7 chr5 52134188 52134328 -147495822 + AluJb SINE Alu 153 293 -19 489 258 0 25 chr5 52134363 52134483 -147495667 + L2 LINE L2 3197 3313 0 215 219 0 0 chr5 52135003 52135044 -147495106 + MIR3 SINE MIR 120 160 -48 1058 133 5 92 chr5 52135102 52135320 -147494830 - MLT2B2 LTR ERVL -9 506 308 10436 72 9 0 chr5 52135427 52135800 -147494350 + L1PA6 LINE L1 3961 4329 -1825 2038 123 10 16 chr5 52135800 52136109 -147494041 + AluY SINE Alu 1 307 -4 10436 72 9 0 chr5 52136109 52137920 -147492230 + L1PA6 LINE L1 4329 6147 -7 604 274 98 14 chr5 52138004 52138373 -147491777 + L1MC4 LINE L1 7501 7900 -142 709 201 34 7 chr5 52138549 52138698 -147491452 - Charlie1a DNA MER1_type -1286 169 17 220 357 114 14 chr5 52138729 52138869 -147491281 + L3b LINE CR1 1294 1447 -136 227 114 0 0 chr5 52139019 52139054 -147491096 - L1MC5 LINE L1 -187 7774 7740 1106 142 30 0 chr5 52139193 52139362 -147490788 - FRAM SINE Alu -3 173 1 2108 117 3 19 chr5 52139491 52139798 -147490352 - AluSx SINE Alu -6 306 5 2197 119 10 3 chr5 52139827 52140130 -147490020 - AluSg SINE Alu -5 305 1 644 248 184 5 chr5 52142013 52142231 -147487919 - MIR SINE MIR 0 262 6 7171 51 2 1 chr5 52142336 52143924 -147486226 + L1PA6 LINE L1 4557 6153 -1 734 225 159 40 chr5 52143980 52144331 -147485819 + L1ME2 LINE L1 5753 6145 -19 924 176 112 45 chr5 52144386 52144699 -147485451 + MER46C DNA MER2_type 4 337 -1 260 319 17 76 chr5 52144792 52144854 -147485296 - MIR SINE MIR -126 136 83 2066 179 56 12 chr5 52144854 52145262 -147484888 - MSTB LTR MaLR 0 426 1 260 319 17 76 chr5 52145262 52145318 -147484832 - MIR SINE MIR -179 83 25 344 300 50 0 chr5 52145709 52145809 -147484341 - MER91C DNA MER1_type -35 105 1 1876 124 69 36 chr5 52147816 52148179 -147481971 + THE1C LTR MaLR 1 375 0 1529 178 54 12 chr5 52148260 52148592 -147481558 - MLT1B LTR MaLR -1 389 44 563 294 63 23 chr5 52148592 52148813 -147481337 + MIR SINE MIR 30 259 -3 447 319 164 21 chr5 52148936 52149265 -147480885 + L1MEd LINE L1 6 381 -5738 273 75 0 0 chr5 52149418 52149458 -147480692 + (CA)n Simple_repeat Simple_repeat 1 40 0 301 242 38 118 chr5 52149469 52150012 -147480138 + L1MEd LINE L1 676 1166 -4953 1942 150 3 0 chr5 52150012 52150299 -147479851 - AluSx SINE Alu -24 288 1 301 242 38 118 chr5 52150299 52150367 -147479783 + L1MEd LINE L1 1166 1238 -4881 475 298 114 55 chr5 52150374 52150686 -147479464 + L1MEd LINE L1 1240 1687 -803 5865 230 54 36 chr5 52151112 52153102 -147477048 + L1M3e LINE L1 1 1955 -5151 2287 107 0 0 chr5 52153102 52153400 -147476750 + AluSx SINE Alu 3 300 -12 5865 230 54 36 chr5 52153400 52155428 -147474722 + L1M3e LINE L1 1955 4745 -2361 1665 117 5 0 chr5 52155435 52155657 -147474493 + AluSx SINE Alu 3 225 -87 1098 203 0 5 chr5 52155657 52155879 -147474271 + L1M3e LINE L1 5043 5263 -1843 1112 191 23 16 chr5 52155885 52156141 -147474009 + L1MD3 LINE L1 7730 7987 -8 444 195 32 110 chr5 52157297 52157451 -147472699 + MIR SINE MIR 116 257 -5 397 219 130 24 chr5 52158472 52158595 -147471555 - LTR67 LTR ERVL -21 536 401 676 282 129 28 chr5 52158629 52158877 -147471273 - LTR67 LTR ERVL -280 277 5 2238 104 0 0 chr5 52160543 52160830 -147469320 - AluSq SINE Alu -26 287 1 345 43 85 0 chr5 52162727 52162774 -147467376 - MADE1 DNA Mariner 0 80 30 312 27 0 0 chr5 52163637 52163674 -147466476 + (TG)n Simple_repeat Simple_repeat 1 37 0 229 279 0 38 chr5 52164217 52164296 -147465854 + CT-rich Low_complexity Low_complexity 1 76 0 21 0 0 0 chr5 52165067 52165088 -147465062 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr5 52165208 52165228 -147464922 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 4350 131 7 47 chr5 52166297 52167017 -147463133 + LTR8 LTR ERV1 1 691 0 450 266 62 0 chr5 52167988 52168116 -147462034 - L2 LINE L2 0 3313 3178 309 326 56 75 chr5 52168245 52168536 -147461614 - L2 LINE L2 -356 2958 2676 7326 44 7 0 chr5 52168536 52169997 -147460153 + L1PA5 LINE L1 4689 6154 0 309 326 56 75 chr5 52169997 52170119 -147460031 - L2 LINE L2 -638 2676 2553 2208 112 27 0 chr5 52170421 52170717 -147459433 + AluSg SINE Alu 1 304 -6 2055 159 0 0 chr5 52171094 52171403 -147458747 + AluSx SINE Alu 1 309 -3 2043 142 0 3 chr5 52171502 52171798 -147458352 + AluJo SINE Alu 11 305 -7 1650 156 55 47 chr5 52172890 52173255 -147456895 + L1MB8 LINE L1 5811 6178 0 214 313 146 28 chr5 52173467 52173611 -147456539 + MIR SINE MIR 90 250 -12 981 304 139 5 chr5 52173631 52174019 -147456131 - MLT1K LTR MaLR 0 588 149 2278 98 56 34 chr5 52174037 52174393 -147455757 - THE1B LTR MaLR 0 364 1 189 0 0 0 chr5 52175023 52175044 -147455106 + (T)n Simple_repeat Simple_repeat 1 21 0 642 188 64 40 chr5 52175374 52175576 -147454574 + L2 LINE L2 3107 3313 0 1298 302 65 38 chr5 52177134 52177716 -147452434 - MLT1L LTR MaLR -17 598 1 2176 119 10 10 chr5 52177810 52178112 -147452038 + AluSx SINE Alu 1 302 -10 2924 10 0 0 chr5 52178222 52178532 -147451618 - AluY SINE Alu 0 311 2 233 287 129 30 chr5 52178630 52178731 -147451419 - L2 LINE L2 -9 3263 3153 21702 103 28 16 chr5 52179411 52182577 -147447573 + L1P LINE L1 11 3217 -2929 1217 90 0 11 chr5 52182577 52182786 -147447364 - L1PA4 LINE L1 0 6155 5981 21702 103 28 16 chr5 52182786 52182839 -147447311 + L1P LINE L1 3217 3268 -2878 * 23974 96 20 6 chr5 52182836 52185998 -147444152 + L1P LINE L1 7 3217 -2929 1235 85 0 11 chr5 52185998 52186207 -147443943 - L1PA4 LINE L1 0 6155 5981 23974 96 20 6 chr5 52186207 52186260 -147443890 + L1P LINE L1 3217 3268 -2878 * 30940 46 5 108 chr5 52186257 52190966 -147439184 + L1P LINE L1 7 4227 -1919 24101 98 13 19 chr5 52191066 52191733 -147438417 - L1P LINE L1 -2657 3489 2819 2480 90 0 0 chr5 52191733 52192043 -147438107 - AluY SINE Alu -1 310 1 24101 98 13 19 chr5 52192043 52194876 -147435274 - L1P LINE L1 -3327 2819 11 4762 204 81 7 chr5 52194886 52196055 -147434095 + L1M4 LINE L1 3651 4906 -1240 634 224 63 0 chr5 52196104 52196247 -147433903 - MLT1K LTR MaLR -351 154 3 1944 221 50 62 chr5 52196364 52196925 -147433225 - MLT2B3 LTR ERVL 0 554 1 2281 161 39 25 chr5 52196940 52197201 -147432949 - MER39 LTR ERV1 0 707 436 2349 98 0 3 chr5 52197201 52197508 -147432642 + AluSg SINE Alu 1 306 -4 2281 161 39 25 chr5 52197508 52197688 -147432462 - MER39 LTR ERV1 -271 436 260 246 244 44 56 chr5 52197674 52197764 -147432386 - LTR48B LTR ERV1 -555 89 1 * 1714 171 113 0 chr5 52197999 52198291 -147431859 - MER1B DNA MER1_type 0 339 15 2533 200 71 71 chr5 52198462 52199092 -147431058 + MER45B DNA AcHobo 1 630 -410 1460 224 71 19 chr5 52200684 52201063 -147429087 + MER45B DNA AcHobo 641 1039 -1 2348 132 44 10 chr5 52201237 52201645 -147428505 - L1MB2 LINE L1 0 6171 5750 2241 110 0 0 chr5 52201922 52202214 -147427936 - AluSx SINE Alu -20 292 1 181 256 64 77 chr5 52202534 52202612 -147427538 + MIR SINE MIR 13 89 -173 274 235 59 0 chr5 52202680 52202748 -147427402 - L2 LINE L2 0 3313 3242 210 316 51 25 chr5 52202784 52202863 -147427287 + MIR SINE MIR 40 120 -88 2306 86 26 7 chr5 52202912 52203215 -147426935 + AluY SINE Alu 1 309 -2 264 355 91 16 chr5 52203226 52203468 -147426682 - MLT1I LTR MaLR -35 374 115 221 291 47 0 chr5 52203549 52203635 -147426515 + MIR3 SINE MIR 118 207 -1 2133 135 0 0 chr5 52203769 52204073 -147426077 - AluSq SINE Alu -9 304 1 2074 114 0 17 chr5 52204383 52204705 -147425445 - AluSg SINE Alu 0 317 1 2451 88 0 0 chr5 52204719 52205027 -147425123 - AluY SINE Alu -2 309 2 2507 84 3 0 chr5 52205157 52205466 -147424684 - AluSp SINE Alu -3 310 1 310 340 76 0 chr5 52205586 52205730 -147424420 - MIR SINE MIR -16 246 92 195 42 0 0 chr5 52207634 52207658 -147422492 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2418 70 0 17 chr5 52207959 52208259 -147421891 + AluSx SINE Alu 1 295 -17 305 258 75 0 chr5 52208655 52208748 -147421402 + MIR SINE MIR 3 102 -160 187 224 121 17 chr5 52208799 52208857 -147421293 + MIR SINE MIR 159 222 -40 1350 135 86 40 chr5 52209699 52210002 -147420148 - MER33 DNA MER1_type -7 317 1 518 246 59 32 chr5 52210737 52210957 -147419193 - Charlie2 DNA MER1_type -2545 237 12 539 221 17 93 chr5 52211312 52211484 -147418666 - MER5A DNA MER1_type -26 163 5 518 272 29 102 chr5 52212155 52212284 -147417866 - MIR SINE MIR -2 260 156 1943 128 14 17 chr5 52212284 52212573 -147417577 + AluSx SINE Alu 1 288 -24 518 272 29 102 chr5 52212573 52212689 -147417461 - MIR SINE MIR -106 156 33 4270 196 64 26 chr5 52212709 52213059 -147417091 - MER45B DNA AcHobo -541 1040 705 2103 131 10 0 chr5 52213059 52213365 -147416785 - AluSx SINE Alu -3 309 1 4270 196 64 26 chr5 52213365 52213983 -147416167 - MER45B DNA AcHobo -876 705 30 1835 130 58 36 chr5 52213983 52214313 -147415837 - MER1B DNA MER1_type 0 337 1 4270 196 64 26 chr5 52214313 52214345 -147415805 - MER45B DNA AcHobo -1551 30 1 2106 112 0 23 chr5 52215350 52215653 -147414497 + AluSg SINE Alu 1 296 -14 485 269 18 18 chr5 52215852 52216019 -147414131 + L1ME4a LINE L1 5535 5701 -420 302 222 140 37 chr5 52216079 52216169 -147413981 + L1ME4a LINE L1 5803 5882 -239 2270 84 3 3 chr5 52216169 52216465 -147413685 + AluY SINE Alu 1 296 -15 302 222 140 37 chr5 52216465 52216631 -147413519 + L1ME4a LINE L1 5882 6112 -9 300 228 0 0 chr5 52216951 52217008 -147413142 + L2 LINE L2 3216 3272 0 738 339 29 0 chr5 52217265 52217507 -147412643 - MIR SINE MIR -9 253 5 419 224 144 25 chr5 52217600 52217880 -147412270 - L1ME LINE L1 -667 5495 5175 1722 210 57 67 chr5 52218003 52218688 -147411462 - L1MC5 LINE L1 -103 7858 7181 334 175 31 51 chr5 52218776 52218876 -147411274 + FLAM_A SINE Alu 38 126 -7 2083 90 32 39 chr5 52218892 52219204 -147410946 + AluY SINE Alu 1 310 -1 2092 101 20 3 chr5 52219221 52219517 -147410633 + AluSg SINE Alu 5 305 -5 290 279 154 0 chr5 52220552 52220656 -147409494 + L2 LINE L2 3194 3313 0 2761 0 0 0 chr5 52221159 52221455 -147408695 + AluYa5 SINE Alu 1 296 -15 216 308 0 0 chr5 52223466 52223531 -147406619 + CT-rich Low_complexity Low_complexity 4 68 0 195 42 0 0 chr5 52223808 52223832 -147406318 + (T)n Simple_repeat Simple_repeat 1 24 0 192 97 0 0 chr5 52224405 52224436 -147405714 + (CCCA)n Simple_repeat Simple_repeat 1 31 0 31 26 0 0 chr5 52225724 52225762 -147404388 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 52226119 52226149 -147404001 + AT_rich Low_complexity Low_complexity 1 30 0 1739 189 0 19 chr5 52228312 52228630 -147401520 - AluJb SINE Alu 0 312 1 31 0 0 0 chr5 52229169 52229200 -147400950 + AT_rich Low_complexity Low_complexity 1 31 0 2150 126 3 3 chr5 52229857 52230159 -147399991 - AluSq SINE Alu -11 302 1 509 294 61 29 chr5 52231309 52231588 -147398562 - MER20B DNA MER1_type -495 288 1 1858 162 3 20 chr5 52232648 52232951 -147397199 - AluJo SINE Alu -14 298 1 630 236 23 51 chr5 52233181 52233371 -147396779 - MER63A DNA MER1_type -1478 210 24 2349 42 0 7 chr5 52233371 52233682 -147396468 + AluY SINE Alu 1 309 0 630 236 23 51 chr5 52233682 52233706 -147396444 - MER63A DNA MER1_type -1664 24 1 23 0 0 0 chr5 52234545 52234568 -147395582 + AT_rich Low_complexity Low_complexity 1 23 0 885 193 6 6 chr5 52234992 52235163 -147394987 + MER58B DNA MER1_type 171 341 0 1993 138 3 0 chr5 52236083 52236372 -147393778 - AluSx SINE Alu -22 290 1 2309 87 0 13 chr5 52236522 52236834 -147393316 - AluY SINE Alu -3 308 1 2655 179 47 0 chr5 52237129 52237660 -147392490 - L1MB7 LINE L1 -27 6157 5602 1748 203 38 118 chr5 52237655 52237849 -147392301 - L1MB7 LINE L1 -2214 3932 3724 * 2342 117 71 17 chr5 52237849 52238258 -147391892 - Tigger2a DNA MER2_type 0 434 4 1748 203 38 118 chr5 52238258 52238710 -147391440 - L1MB7 LINE L1 -2422 3724 3237 1740 157 0 29 chr5 52238710 52238990 -147391160 - AluJb SINE Alu -40 272 1 1748 203 38 118 chr5 52238990 52239101 -147391049 - L1MB7 LINE L1 -2909 3237 3260 2360 109 0 3 chr5 52239101 52239414 -147390736 + AluSx SINE Alu 1 312 0 1748 203 38 118 chr5 52239414 52239593 -147390557 - L1MB7 LINE L1 -2885 3261 3069 266 244 0 24 chr5 52240092 52240174 -147389976 - MLT1K LTR MaLR -20 568 489 21 36 0 0 chr5 52240409 52240437 -147389713 + AT_rich Low_complexity Low_complexity 1 28 0 220 278 56 0 chr5 52241878 52241950 -147388200 + L3b LINE CR1 1505 1580 -3 893 156 4 140 chr5 52243337 52243587 -147386563 + MER20 DNA MER1_type 4 219 0 405 240 96 7 chr5 52243885 52244031 -147386119 - L2 LINE L2 -43 3270 3112 23 0 0 0 chr5 52244740 52244763 -147385387 + AT_rich Low_complexity Low_complexity 1 23 0 2107 106 40 3 chr5 52244763 52245064 -147385086 - AluSq SINE Alu -1 312 1 23 0 0 0 chr5 52245314 52245337 -147384813 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 52245437 52245469 -147384681 + AT_rich Low_complexity Low_complexity 1 32 0 252 0 0 0 chr5 52247493 52247521 -147382629 + (TA)n Simple_repeat Simple_repeat 2 29 0 2440 75 3 0 chr5 52247521 52247828 -147382322 - AluY SINE Alu -3 308 1 1008 130 160 30 chr5 52248069 52248300 -147381850 + MER44D DNA MER2_type 1 531 -78 1489 188 72 6 chr5 52248302 52248621 -147381529 - MER2 DNA MER2_type -5 340 1 448 176 0 0 chr5 52248624 52248698 -147381452 + MER44D DNA MER2_type 526 599 -6 21 36 0 0 chr5 52249423 52249451 -147380699 + AT_rich Low_complexity Low_complexity 1 28 0 2309 100 3 0 chr5 52249457 52249766 -147380384 + AluSp SINE Alu 1 310 -3 202 227 0 0 chr5 52249857 52249901 -147380249 + L2 LINE L2 3267 3310 -3 892 45 0 0 chr5 52250554 52250665 -147379485 + L1PA5 LINE L1 6040 6150 -4 504 0 0 0 chr5 52250666 52250722 -147379428 + (TA)n Simple_repeat Simple_repeat 1 56 0 273 209 0 0 chr5 52251395 52251462 -147378688 + CT-rich Low_complexity Low_complexity 1 67 0 1624 113 8 0 chr5 52251592 52251830 -147378320 - L1PB1 LINE L1 -4 6147 5908 628 143 31 0 chr5 52252074 52252172 -147377978 - U6 snRNA snRNA -6 101 1 439 246 18 9 chr5 52252196 52252310 -147377840 - MIR SINE MIR -58 204 90 641 259 84 40 chr5 52252815 52253066 -147377084 - L2 LINE L2 0 3313 3052 1598 196 3 13 chr5 52253066 52253367 -147376783 + AluJb SINE Alu 1 298 -14 736 244 5 80 chr5 52253540 52253753 -147376397 + MIR SINE MIR 33 229 -33 195 69 0 0 chr5 52254185 52254214 -147375936 + (CA)n Simple_repeat Simple_repeat 1 29 0 206 170 38 38 chr5 52254496 52254549 -147375601 + CT-rich Low_complexity Low_complexity 5 57 0 2256 121 7 0 chr5 52254802 52255158 -147374992 - AluSx SINE Alu 0 358 1 209 343 169 23 chr5 52255310 52255482 -147374668 - L2 LINE L2 -1 3271 3075 1306 188 90 24 chr5 52255982 52256237 -147373913 - AluJo SINE Alu -40 272 1 978 134 32 48 chr5 52256376 52256563 -147373587 + L1PA15 LINE L1 5969 6152 -13 216 0 0 0 chr5 52258229 52258253 -147371897 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1693 155 4 25 chr5 52258253 52258531 -147371619 - AluJo SINE Alu -32 280 9 198 270 56 79 chr5 52259756 52259845 -147370305 - MIR SINE MIR -6 256 170 321 308 82 36 chr5 52259912 52260107 -147370043 + MIR SINE MIR 58 261 -1 815 136 0 16 chr5 52260574 52260699 -147369451 + FLAM_C SINE Alu 4 126 -17 342 0 0 0 chr5 52260699 52260737 -147369413 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 182 237 0 0 chr5 52260749 52260787 -147369363 - MIR SINE MIR -25 237 200 539 251 127 59 chr5 52260814 52261121 -147369029 + MLT1J2 LTR MaLR 39 366 -84 513 316 32 11 chr5 52261191 52261378 -147368772 - MIR SINE MIR -71 191 1 1678 124 4 0 chr5 52261585 52261838 -147368312 + AluSx SINE Alu 48 301 0 184 264 218 35 chr5 52262283 52262370 -147367780 - L2 LINE L2 -1 3271 3169 1266 59 0 0 chr5 52263762 52263939 -147366211 + AluY SINE Alu 132 308 0 474 244 195 18 chr5 52264511 52264675 -147365475 - MIR3 SINE MIR -15 193 1 1839 169 3 3 chr5 52265249 52265544 -147364606 - AluJb SINE Alu -17 295 1 1721 196 0 16 chr5 52265568 52265885 -147364265 + AluJo SINE Alu 1 312 0 255 61 0 0 chr5 52266034 52266067 -147364083 + (T)n Simple_repeat Simple_repeat 1 33 0 759 272 81 4 chr5 52266145 52266406 -147363744 - LTR33A LTR ERVL -18 505 225 251 279 23 12 chr5 52266533 52266619 -147363531 - LTR33 LTR ERVL -346 175 89 25 0 0 0 chr5 52266988 52267013 -147363137 + AT_rich Low_complexity Low_complexity 1 25 0 743 108 0 8 chr5 52267060 52267180 -147362970 - L1MB4 LINE L1 -1 6179 6061 724 272 34 34 chr5 52267880 52268115 -147362035 + MIR SINE MIR 28 262 0 34 55 0 0 chr5 52270151 52270206 -147359944 + AT_rich Low_complexity Low_complexity 1 55 0 2538 53 10 0 chr5 52273412 52273713 -147356437 + AluY SINE Alu 1 304 -7 196 302 0 0 chr5 52275576 52275619 -147354531 + L2 LINE L2 3247 3289 -24 1957 113 29 7 chr5 52275786 52276095 -147354055 - AluSx SINE Alu 0 315 1 512 296 62 11 chr5 52276322 52276498 -147353652 - MIR SINE MIR -72 190 6 245 308 0 15 chr5 52276536 52276601 -147353549 + MIR SINE MIR 35 98 -164 213 39 0 0 chr5 52277339 52277365 -147352785 + (CA)n Simple_repeat Simple_repeat 1 26 0 1460 172 55 17 chr5 52277511 52277801 -147352349 + MER7A DNA MER2_type 1 299 -47 189 107 0 0 chr5 52277885 52277913 -147352237 + (GGGTG)n Simple_repeat Simple_repeat 4 31 0 2067 118 3 56 chr5 52278592 52278913 -147351237 + AluSx SINE Alu 1 304 -8 2242 113 0 0 chr5 52279502 52279811 -147350339 + AluSc SINE Alu 1 309 0 261 0 0 0 chr5 52279960 52279989 -147350161 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2398 41 24 7 chr5 52280026 52280319 -147349831 - AluY SINE Alu -12 299 2 205 111 0 56 chr5 52281823 52281859 -147348291 + (TCCCC)n Simple_repeat Simple_repeat 3 36 0 1155 260 263 50 chr5 52281910 52282513 -147347637 - L2 LINE L2 -461 2853 2380 2333 68 0 4 chr5 52282513 52282819 -147347331 + AluSc SINE Alu 1 305 0 1155 260 263 50 chr5 52282819 52283635 -147346515 - L2 LINE L2 -934 2380 1130 892 310 64 24 chr5 52283635 52284090 -147346060 - L2 LINE L2 -2426 888 416 1727 139 75 4 chr5 52284376 52284676 -147345474 + AluJb SINE Alu 1 319 0 289 306 0 0 chr5 52284827 52284899 -147345251 + L2 LINE L2 3182 3253 -19 353 287 104 0 chr5 52285859 52285974 -147344176 - MIR3 SINE MIR -1 207 81 386 321 55 20 chr5 52285991 52286193 -147343957 + MIR SINE MIR 13 219 -43 1927 155 13 3 chr5 52286219 52286528 -147343622 + AluSx SINE Alu 1 312 0 486 0 0 0 chr5 52287215 52287269 -147342881 + (TG)n Simple_repeat Simple_repeat 2 55 0 211 294 0 0 chr5 52289138 52289189 -147340961 + L2 LINE L2 3261 3311 -2 821 157 0 21 chr5 52290192 52290332 -147339818 + FLAM_C SINE Alu 1 137 -6 1397 178 68 25 chr5 52290994 52291315 -147338835 + MER58B DNA MER1_type 3 337 -4 290 206 10 78 chr5 52291326 52291428 -147338722 - MER5C DNA MER1_type 0 324 230 443 219 21 0 chr5 52291453 52291549 -147338601 - MER5C DNA MER1_type -200 124 27 243 0 0 0 chr5 52291894 52291921 -147338229 + (T)n Simple_repeat Simple_repeat 1 27 0 2271 102 10 0 chr5 52292033 52292338 -147337812 + AluSg1 SINE Alu 1 308 -1 383 313 42 12 chr5 52293189 52293377 -147336773 + MIR SINE MIR 17 211 -51 21 57 0 0 chr5 52293425 52293460 -147336690 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 52294141 52294163 -147335987 + AT_rich Low_complexity Low_complexity 1 22 0 183 360 10 20 chr5 52294685 52294785 -147335365 - MIR SINE MIR -15 247 149 208 225 0 0 chr5 52295106 52295146 -147335004 - L2 LINE L2 -5 3267 3228 23 0 0 0 chr5 52295374 52295397 -147334753 + AT_rich Low_complexity Low_complexity 1 23 0 372 318 7 0 chr5 52295551 52295705 -147334445 + L1M4 LINE L1 2 156 -6386 328 266 62 34 chr5 52295953 52296033 -147334117 + L1M4 LINE L1 485 561 -5981 195 42 0 0 chr5 52296033 52296057 -147334093 + (TTG)n Simple_repeat Simple_repeat 2 25 0 328 266 62 34 chr5 52296057 52296153 -147333997 + L1M4 LINE L1 561 666 -5876 4220 193 47 108 chr5 52296194 52297601 -147332549 + L1M4 LINE L1 816 2307 -4337 1713 191 46 3 chr5 52297601 52297884 -147332266 + AluJb SINE Alu 1 295 -17 4220 193 47 108 chr5 52297884 52297975 -147332175 + L1M4 LINE L1 2307 2402 -4242 1931 117 95 0 chr5 52297975 52298258 -147331892 + AluSq SINE Alu 1 310 -3 4220 193 47 108 chr5 52298258 52299232 -147330918 + L1M4 LINE L1 2402 3261 -3383 23 54 0 0 chr5 52299238 52299275 -147330875 + AT_rich Low_complexity Low_complexity 1 37 0 380 303 13 53 chr5 52299423 52299575 -147330575 - L2 LINE L2 -50 3263 3118 675 281 96 70 chr5 52299649 52300066 -147330084 + L2 LINE L2 2886 3313 0 366 256 0 12 chr5 52300067 52300153 -147329997 - L2 LINE L2 -1002 2312 2228 350 214 97 29 chr5 52300766 52300869 -147329281 - MIR3 SINE MIR -94 114 5 2034 112 7 0 chr5 52301299 52301568 -147328582 + AluSx SINE Alu 37 307 -5 734 308 63 8 chr5 52301876 52302250 -147327900 - L1MC4a LINE L1 -322 5799 5531 25 0 0 0 chr5 52302903 52302928 -147327222 + AT_rich Low_complexity Low_complexity 1 25 0 193 369 15 0 chr5 52302945 52303010 -147327140 + MIR SINE MIR 57 122 -140 2189 111 0 0 chr5 52303573 52303853 -147326297 + AluSq SINE Alu 1 280 -33 429 20 0 0 chr5 52303853 52303903 -147326247 + (CA)n Simple_repeat Simple_repeat 1 50 0 2272 53 7 11 chr5 52304389 52304706 -147325444 - AluY SINE Alu 0 316 1 286 357 10 0 chr5 52304746 52304844 -147325306 - L3 LINE CR1 -7 1570 1472 202 291 205 24 chr5 52305111 52305238 -147324912 - L3 LINE CR1 -218 1359 1210 3621 181 90 19 chr5 52306006 52306792 -147323358 + MER21B LTR ERV1 1 842 -21 304 307 76 31 chr5 52306821 52307046 -147323104 + L1ME LINE L1 5572 5806 -315 21 0 0 0 chr5 52308369 52308390 -147321760 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 52308753 52308777 -147321373 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 1062 62 0 0 chr5 52308777 52308905 -147321245 - AluSg SINE Alu -182 128 1 2003 120 26 13 chr5 52308970 52309278 -147320872 + AluSx SINE Alu 1 312 0 336 119 0 0 chr5 52310562 52310621 -147319529 + (GA)n Simple_repeat Simple_repeat 2 60 0 23 54 0 0 chr5 52311183 52311220 -147318930 + AT_rich Low_complexity Low_complexity 1 37 0 652 200 17 17 chr5 52312035 52312215 -147317935 + L1MC5 LINE L1 7719 7898 -63 329 312 32 40 chr5 52312475 52312600 -147317550 + MIR SINE MIR 1 124 -138 1099 205 22 26 chr5 52313333 52313388 -147316762 + AluJb SINE Alu 84 138 -174 2473 82 0 0 chr5 52313388 52313691 -147316459 + AluSq SINE Alu 1 303 -10 1099 205 22 26 chr5 52313691 52313864 -147316286 + AluJb SINE Alu 138 311 -1 295 290 43 101 chr5 52316166 52316373 -147313777 - L2 LINE L2 -1 3271 3077 261 332 153 43 chr5 52316376 52316677 -147313473 - L2 LINE L2 -340 2974 2641 297 301 54 0 chr5 52316718 52316811 -147313339 - L2 LINE L2 -888 2426 2329 2528 40 10 0 chr5 52317172 52317472 -147312678 + AluY SINE Alu 1 303 -8 235 313 10 21 chr5 52317850 52317946 -147312204 + MIR SINE MIR 22 116 -92 805 164 0 8 chr5 52318598 52318732 -147311418 + AluJo SINE Alu 1 133 -169 259 311 189 0 chr5 52319097 52319229 -147310921 + L3 LINE CR1 987 1143 -434 1843 161 0 27 chr5 52319345 52319644 -147310506 + AluJo SINE Alu 1 291 -21 456 19 0 0 chr5 52319925 52319978 -147310172 + (TG)n Simple_repeat Simple_repeat 2 54 0 888 134 0 0 chr5 52319981 52320100 -147310050 - AluSq/x SINE Alu -193 119 1 255 314 49 10 chr5 52320372 52320474 -147309676 - MIR SINE MIR -33 229 124 1061 176 0 0 chr5 52320928 52321104 -147309046 + AluJo SINE Alu 135 310 -2 2142 132 0 13 chr5 52321710 52322021 -147308129 + AluSp SINE Alu 2 308 -5 6476 60 3 5 chr5 52322278 52323146 -147307004 - L1PA7 LINE L1 0 6154 5288 26 30 0 0 chr5 52323379 52323412 -147306738 + AT_rich Low_complexity Low_complexity 1 33 0 185 295 66 60 chr5 52323840 52324023 -147306127 - L3b LINE CR1 -12 1571 1388 187 208 113 0 chr5 52324319 52324372 -147305778 - L3b LINE CR1 -418 1165 1107 2687 151 10 18 chr5 52325377 52325880 -147304270 - L1MB3 LINE L1 0 6183 5685 400 304 89 12 chr5 52326534 52326702 -147303448 - MER5A DNA MER1_type -8 181 1 310 293 69 26 chr5 52326817 52326933 -147303217 - L2 LINE L2 -1 3271 3151 892 143 23 0 chr5 52327764 52327897 -147302253 + AluJ SINE Alu 1 136 -176 2247 80 0 3 chr5 52327916 52328246 -147301904 + AluY SINE Alu 1 329 0 956 192 0 23 chr5 52328248 52328425 -147301725 + AluJ SINE Alu 140 312 0 247 311 78 29 chr5 52328482 52328585 -147301565 + MIR SINE MIR 149 256 -6 344 227 93 21 chr5 52329052 52329149 -147301001 + MIR3 SINE MIR 86 189 -19 446 275 126 7 chr5 52329162 52329328 -147300822 + MIR SINE MIR 6 188 -62 270 56 0 0 chr5 52329672 52329708 -147300442 + (TG)n Simple_repeat Simple_repeat 2 37 0 1585 154 36 49 chr5 52330047 52330353 -147299797 + AluJo SINE Alu 1 302 -10 2409 99 0 0 chr5 52331355 52331657 -147298493 + AluSq SINE Alu 1 302 -11 2392 206 35 28 chr5 52331820 52332397 -147297753 - MER119 DNA MER1_type 0 583 3 2090 96 52 10 chr5 52332874 52333165 -147296985 + AluSp SINE Alu 1 303 -10 803 134 24 0 chr5 52333423 52333550 -147296600 + FLAM_C SINE Alu 1 130 -3 26 0 0 0 chr5 52334836 52334862 -147295288 + AT_rich Low_complexity Low_complexity 1 26 0 795 179 0 8 chr5 52334936 52335070 -147295080 - FLAM_C SINE Alu 0 133 1 2335 84 13 0 chr5 52335124 52335423 -147294727 + AluSg1 SINE Alu 1 303 -6 383 272 64 25 chr5 52335791 52335967 -147294183 - MER20B DNA MER1_type -25 194 1 2282 123 7 0 chr5 52336432 52336742 -147293408 + AluSx SINE Alu 1 312 0 199 283 19 0 chr5 52337017 52337070 -147293080 - MIR SINE MIR -59 149 96 192 245 20 0 chr5 52337639 52337688 -147292462 - MIR3 SINE MIR -2 206 157 365 313 140 7 chr5 52338125 52338275 -147291875 + MIR3 SINE MIR 36 205 -3 246 261 91 34 chr5 52338548 52338636 -147291514 - L2 LINE L2 -8 3264 3172 231 283 232 10 chr5 52338818 52338917 -147291233 - L2 LINE L2 -19 3253 3133 2254 112 0 6 chr5 52339402 52339714 -147290436 + AluSq SINE Alu 1 310 -3 2084 96 65 3 chr5 52339726 52340018 -147290132 + AluSp SINE Alu 1 310 -3 809 144 0 115 chr5 52340964 52341138 -147289012 + MER45 DNA AcHobo 1 154 -1427 565 149 65 0 chr5 52341141 52341248 -147288902 + MER45 DNA AcHobo 1468 1581 0 233 323 19 81 chr5 52341317 52341478 -147288672 + L2 LINE L2 3159 3309 -4 462 18 0 0 chr5 52343754 52343809 -147286341 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 378 243 14 88 chr5 52344221 52344304 -147285846 - MIR SINE MIR -34 228 159 2484 67 0 10 chr5 52344304 52344604 -147285546 + AluSc SINE Alu 1 297 -12 378 243 14 88 chr5 52344604 52344668 -147285482 - MIR SINE MIR -103 159 92 243 61 0 0 chr5 52344867 52344900 -147285250 + (TG)n Simple_repeat Simple_repeat 2 34 0 196 329 122 0 chr5 52344963 52345045 -147285105 - MIR SINE MIR -14 248 157 803 173 0 0 chr5 52345116 52345243 -147284907 - FLAM_C SINE Alu -16 127 1 249 271 7 54 chr5 52345259 52345347 -147284803 - MIR SINE MIR -71 137 51 2090 112 0 83 chr5 52345531 52345673 -147284477 + AluSq SINE Alu 1 153 -160 2442 57 3 0 chr5 52345673 52345974 -147284176 + AluY SINE Alu 1 302 -9 2090 112 0 83 chr5 52345974 52346170 -147283980 + AluSq SINE Alu 153 311 -2 229 210 32 0 chr5 52346418 52346480 -147283670 + MER112 DNA MER1_type 8 71 -189 1733 76 5 5 chr5 52346900 52347123 -147283027 + AluSp SINE Alu 1 223 -90 279 399 30 20 chr5 52347283 52347486 -147282664 - L3 LINE CR1 -1342 235 31 27 29 0 0 chr5 52347574 52347608 -147282542 + AT_rich Low_complexity Low_complexity 1 34 0 892 135 7 7 chr5 52347616 52347757 -147282393 + AluSq/x SINE Alu 1 141 -171 373 271 55 17 chr5 52350470 52350651 -147279499 + MARNA DNA Mariner 125 312 -274 26 0 0 0 chr5 52350793 52350819 -147279331 + AT_rich Low_complexity Low_complexity 1 26 0 2226 52 42 3 chr5 52350821 52351109 -147279041 + AluY SINE Alu 1 299 -12 206 77 51 0 chr5 52351509 52351548 -147278602 + T-rich Low_complexity Low_complexity 2 42 0 2216 104 0 0 chr5 52351820 52352109 -147278041 + AluSc SINE Alu 1 289 -20 2298 107 3 0 chr5 52352609 52352909 -147277241 - AluSp SINE Alu -6 307 7 2047 92 70 0 chr5 52352916 52353189 -147276961 - AluSx SINE Alu -18 294 3 693 149 0 130 chr5 52353333 52353369 -147276781 + MER46A DNA MER2_type 2 41 -195 2166 193 65 104 chr5 52353369 52354126 -147276024 + LTR8A LTR ERV1 1 727 0 693 149 0 130 chr5 52354126 52354250 -147275900 + MER46A DNA MER2_type 41 141 -95 308 250 0 0 chr5 52354277 52354353 -147275797 + MER34 LTR ERV1 21 96 -446 1296 141 36 55 chr5 52354366 52354614 -147275536 + LTR29 LTR ERV1 145 425 -197 1887 117 0 19 chr5 52354614 52354878 -147275272 - AluSx SINE Alu -14 298 40 1296 141 36 55 chr5 52354878 52355073 -147275077 + LTR29 LTR ERV1 425 622 0 2247 106 10 6 chr5 52355102 52355413 -147274737 + AluSq SINE Alu 1 312 -1 482 134 0 12 chr5 52355435 52355517 -147274633 + Tigger4(Zombi) DNA MER2_type 2651 2731 0 547 201 326 21 chr5 52355821 52356100 -147274050 + MER34C LTR ERV1 1 364 -221 348 224 85 90 chr5 52356113 52356314 -147273836 + MER34 LTR ERV1 448 542 0 690 217 43 0 chr5 52356483 52356644 -147273506 + MER45A DNA AcHobo 4 171 -7 192 40 0 0 chr5 52357713 52357738 -147272412 + (CAA)n Simple_repeat Simple_repeat 1 25 0 23 68 0 0 chr5 52359152 52359196 -147270954 + AT_rich Low_complexity Low_complexity 1 44 0 3153 200 73 45 chr5 52360248 52360763 -147269387 + L1MDa LINE L1 564 1063 -5477 1979 112 17 27 chr5 52360763 52361059 -147269091 + AluSg SINE Alu 1 293 -17 3153 200 73 45 chr5 52361059 52361145 -147269005 + L1MDa LINE L1 1063 1145 -5395 2373 98 3 0 chr5 52361145 52361452 -147268698 + AluSp SINE Alu 1 308 -5 3153 200 73 45 chr5 52361452 52362328 -147267822 + L1MDa LINE L1 1145 2097 -4443 964 204 95 14 chr5 52362329 52362623 -147267527 + LTR48 LTR ERV1 1 318 -469 725 176 85 70 chr5 52362620 52362956 -147267194 + LTR48 LTR ERV1 239 785 -2 * 411 100 57 0 chr5 52362959 52363029 -147267121 + L1MDa LINE L1 2109 2182 -4358 650 203 55 0 chr5 52363039 52363221 -147266929 + L1MDa LINE L1 1283 1474 -5066 1122 194 32 16 chr5 52363221 52363535 -147266615 + L1MDa LINE L1 2204 2522 -4018 293 205 0 64 chr5 52363581 52363659 -147266491 + L1MD2 LINE L1 6071 6143 -216 2473 201 71 12 chr5 52363666 52364272 -147265878 + LTR48B LTR ERV1 2 643 -1 492 231 15 15 chr5 52364280 52364414 -147265736 + L1MD2 LINE L1 6210 6343 -16 180 0 0 0 chr5 52365379 52365399 -147264751 + (A)n Simple_repeat Simple_repeat 1 20 0 321 26 0 0 chr5 52365738 52365776 -147264374 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2065 154 0 3 chr5 52366355 52366661 -147263489 - AluJb SINE Alu -7 305 1 2269 98 0 16 chr5 52368004 52368310 -147261840 - AluY SINE Alu -8 303 3 21 0 0 0 chr5 52368597 52368618 -147261532 + AT_rich Low_complexity Low_complexity 1 21 0 1585 192 0 55 chr5 52368820 52369132 -147261018 + AluJo SINE Alu 1 295 -17 734 267 71 5 chr5 52369169 52369379 -147260771 + MIR SINE MIR 11 234 -28 624 27 0 0 chr5 52369397 52369471 -147260679 + (CCA)n Simple_repeat Simple_repeat 3 76 0 1742 192 0 10 chr5 52369667 52369802 -147260348 + AluJo SINE Alu 1 136 -176 2361 89 0 13 chr5 52369802 52370116 -147260034 + AluY SINE Alu 1 310 -1 1742 192 0 10 chr5 52370116 52370271 -147259879 + AluJo SINE Alu 136 288 -24 25 0 0 0 chr5 52370392 52370417 -147259733 + AT_rich Low_complexity Low_complexity 1 25 0 301 349 54 12 chr5 52370600 52370766 -147259384 - L2 LINE L2 -274 3039 2867 2288 118 0 3 chr5 52372311 52372624 -147257526 - AluSx SINE Alu 0 312 1 1931 106 58 4 chr5 52373135 52373410 -147256740 + AluSx SINE Alu 1 290 -22 2281 107 0 16 chr5 52373477 52373785 -147256365 + AluSg SINE Alu 1 303 -7 2423 66 0 0 chr5 52373912 52374201 -147255949 - AluY SINE Alu -21 290 2 1685 144 14 48 chr5 52374766 52375058 -147255092 - AluJo SINE Alu -30 282 1 21 36 0 0 chr5 52375209 52375237 -147254913 + AT_rich Low_complexity Low_complexity 1 28 0 1342 201 28 8 chr5 52376005 52376259 -147253891 + AluJo SINE Alu 44 302 -10 26 50 0 0 chr5 52377337 52377377 -147252773 + AT_rich Low_complexity Low_complexity 1 40 0 2303 94 3 10 chr5 52379608 52379916 -147250234 + AluSx SINE Alu 2 307 -5 470 294 80 67 chr5 52381616 52381990 -147248160 + L3 LINE CR1 904 1282 -295 2410 92 0 0 chr5 52382052 52382358 -147247792 - AluSg SINE Alu -4 306 1 241 339 53 32 chr5 52382372 52382561 -147247589 + L3 LINE CR1 1380 1572 -5 339 314 78 82 chr5 52383132 52383463 -147246687 + L2 LINE L2 2940 3269 -3 192 356 0 10 chr5 52383591 52383695 -147246455 - L2 LINE L2 -1022 2292 2190 907 171 78 39 chr5 52383902 52384107 -147246043 + AluJo SINE Alu 85 297 -15 2285 112 0 3 chr5 52384330 52384634 -147245516 - AluSx SINE Alu -9 303 1 21 0 0 0 chr5 52384723 52384744 -147245406 + AT_rich Low_complexity Low_complexity 1 21 0 2268 101 0 0 chr5 52386288 52386574 -147243576 + AluSx SINE Alu 1 286 -26 265 270 51 18 chr5 52387130 52387222 -147242928 - MIR SINE MIR -86 122 18 1640 186 19 22 chr5 52388081 52388398 -147241752 - 7SLRNA srpRNA srpRNA -4 316 1 208 70 47 0 chr5 52388455 52388498 -147241652 + (TA)n Simple_repeat Simple_repeat 1 45 0 2194 108 3 7 chr5 52388498 52388793 -147241357 - AluSx SINE Alu -18 294 1 1650 165 34 22 chr5 52388823 52389144 -147241006 + ERVL LTR ERVL 1892 2216 -3548 824 199 0 48 chr5 52389328 52389494 -147240656 - FRAM SINE Alu -18 158 1 1404 153 134 20 chr5 52389687 52389961 -147240189 - AluJb SINE Alu 0 303 1 298 152 0 0 chr5 52391138 52391184 -147238966 + L2 LINE L2 3262 3307 -6 438 273 52 91 chr5 52391216 52391447 -147238703 - MIR SINE MIR -6 256 35 9474 183 70 38 chr5 52391603 52393195 -147236955 + L1MC3 LINE L1 5318 7014 -771 484 233 23 39 chr5 52393195 52393359 -147236791 + FLAM_A SINE Alu 2 133 0 9474 183 70 38 chr5 52393359 52394150 -147236000 + L1MC3 LINE L1 7014 7778 -7 283 263 138 12 chr5 52394427 52394587 -147235563 + L1ME LINE L1 5685 5864 -298 2398 71 0 0 chr5 52394598 52394894 -147235256 + AluY SINE Alu 1 296 -15 1688 180 5 79 chr5 52395062 52395442 -147234708 - L1MB8 LINE L1 0 6178 5839 2473 94 0 0 chr5 52395442 52395750 -147234400 - AluSx SINE Alu -4 308 1 1688 180 5 79 chr5 52395750 52395834 -147234316 - L1MB8 LINE L1 -339 5839 5750 322 331 164 42 chr5 52395834 52396097 -147234053 + L2 LINE L2 2978 3272 0 384 263 140 34 chr5 52396178 52396357 -147233793 + MIR SINE MIR 24 221 -41 2140 115 14 0 chr5 52396439 52396734 -147233416 + AluSx SINE Alu 1 299 -13 249 301 27 14 chr5 52396735 52396808 -147233342 - MIR3 SINE MIR -49 159 86 390 350 38 16 chr5 52396818 52397004 -147233146 + MIR SINE MIR 3 192 -70 202 304 0 0 chr5 52397030 52397086 -147233064 + (CATA)n Simple_repeat Simple_repeat 1 56 0 1399 170 30 44 chr5 52397668 52397939 -147232211 + AluJb SINE Alu 12 278 -34 282 29 0 0 chr5 52398078 52398113 -147232037 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2180 100 0 0 chr5 52398114 52398395 -147231755 - AluSq SINE Alu -32 281 1 368 289 107 13 chr5 52398475 52398624 -147231526 - L2 LINE L2 -4 3309 3147 998 262 162 9 chr5 52398624 52399069 -147231081 - L2 LINE L2 -275 3038 2525 1572 101 135 116 chr5 52400089 52400244 -147229906 + THE1B LTR MaLR 1 151 -213 1893 114 14 21 chr5 52400244 52400557 -147229593 + AluSg SINE Alu 3 313 0 1572 101 135 116 chr5 52400557 52400755 -147229395 + THE1B LTR MaLR 151 362 -2 380 93 0 0 chr5 52400760 52400814 -147229336 + THE1B-int LTR MaLR 1 54 -1526 9550 93 1 11 chr5 52400814 52401417 -147228733 + THE1B-int LTR MaLR 257 864 -716 2057 119 36 3 chr5 52401417 52401719 -147228431 + AluSq SINE Alu 1 312 -1 9550 93 1 11 chr5 52401719 52402452 -147227698 + THE1B-int LTR MaLR 864 1580 0 1956 122 60 78 chr5 52402453 52402823 -147227327 + THE1B LTR MaLR 2 364 0 759 261 7 70 chr5 52404619 52404870 -147225280 + MIR SINE MIR 2 236 -26 622 251 164 19 chr5 52404870 52405077 -147225073 - MER8 DNA MER2_type -1 238 2 759 261 7 70 chr5 52405077 52405097 -147225053 + MIR SINE MIR 236 256 -6 852 186 74 103 chr5 52405391 52405473 -147224677 + MER33 DNA MER1_type 1 84 -2501 2127 92 7 7 chr5 52405473 52405799 -147224351 + AluSx SINE Alu 1 326 0 852 186 74 103 chr5 52405799 52406026 -147224124 + MER33 DNA MER1_type 84 302 -22 293 245 240 15 chr5 52406090 52406294 -147223856 - MIR SINE MIR -6 256 7 713 215 35 0 chr5 52406667 52406811 -147223339 + MER20 DNA MER1_type 16 164 -55 29 28 0 0 chr5 52406915 52406951 -147223199 + AT_rich Low_complexity Low_complexity 1 36 0 369 221 0 0 chr5 52407799 52407867 -147222283 + L2 LINE L2 3204 3271 -1 329 309 24 12 chr5 52408039 52408123 -147222027 + L2 LINE L2 3102 3186 -86 256 303 34 22 chr5 52408180 52408269 -147221881 - MIR SINE MIR -153 109 20 331 297 0 40 chr5 52408904 52409005 -147221145 + MIR SINE MIR 6 102 -160 23 0 0 0 chr5 52409176 52409199 -147220951 + AT_rich Low_complexity Low_complexity 1 23 0 1780 127 20 150 chr5 52409325 52409378 -147220772 + MSTC LTR MaLR 1 59 -369 2163 98 44 0 chr5 52409378 52409674 -147220476 + AluSq SINE Alu 1 309 -4 1780 127 20 150 chr5 52409674 52409731 -147220419 + MSTC LTR MaLR 59 122 -306 1993 114 0 81 chr5 52409731 52410064 -147220086 - AluSx SINE Alu -6 306 1 1780 127 20 150 chr5 52410064 52410199 -147219951 + MSTC LTR MaLR 122 273 -155 2448 47 0 10 chr5 52410199 52410495 -147219655 + AluY SINE Alu 1 293 -18 1780 127 20 150 chr5 52410495 52410650 -147219500 + MSTC LTR MaLR 273 446 18 1977 150 0 22 chr5 52410650 52410963 -147219187 + AluSx SINE Alu 1 306 -6 1780 127 20 150 chr5 52410963 52410978 -147219172 + MSTC LTR MaLR 446 351 -77 1958 160 0 3 chr5 52410978 52411278 -147218872 + AluJb SINE Alu 1 299 -13 1780 127 20 150 chr5 52411278 52411346 -147218804 + MSTC LTR MaLR 350 425 -3 2433 74 3 6 chr5 52411781 52412093 -147218057 + AluY SINE Alu 1 311 0 278 227 0 30 chr5 52414335 52414401 -147215749 + MIR SINE MIR 127 190 -72 2001 127 3 30 chr5 52415577 52415876 -147214274 - AluSx SINE Alu -19 293 3 2477 70 0 16 chr5 52416226 52416542 -147213608 + AluY SINE Alu 1 311 0 21 36 0 0 chr5 52418843 52418871 -147211279 + AT_rich Low_complexity Low_complexity 1 28 0 33 43 0 0 chr5 52419163 52419210 -147210940 + AT_rich Low_complexity Low_complexity 1 47 0 2009 118 0 4 chr5 52419780 52420060 -147210090 + AluSx SINE Alu 1 279 -33 471 18 0 0 chr5 52420060 52420116 -147210034 + (CA)n Simple_repeat Simple_repeat 1 56 0 930 244 50 36 chr5 52420967 52421246 -147208904 - MLT1A2 LTR MaLR -90 284 2 2085 140 25 25 chr5 52421537 52421901 -147208249 + THE1C LTR MaLR 1 364 -11 1934 131 4 0 chr5 52421902 52422169 -147207981 + AluSq SINE Alu 1 268 -45 225 154 0 0 chr5 52422173 52422212 -147207938 + GA-rich Low_complexity Low_complexity 3 41 0 234 190 0 35 chr5 52425509 52425567 -147204583 + MER5C DNA MER1_type 72 127 -197 2257 92 3 0 chr5 52426011 52426306 -147203844 - AluSp SINE Alu -17 296 1 2175 94 28 0 chr5 52427150 52427438 -147202712 + AluY SINE Alu 3 298 -13 2015 148 0 0 chr5 52427850 52428133 -147202017 - AluSx SINE Alu -27 285 3 241 315 126 9 chr5 52428817 52428928 -147201222 + L2 LINE L2 3144 3267 -5 570 283 19 82 chr5 52429507 52429935 -147200215 + L1ME3A LINE L1 3817 4217 -1929 1238 258 64 26 chr5 52430046 52430532 -147199618 + L1ME3A LINE L1 5426 5937 -233 211 120 20 40 chr5 52430811 52430861 -147199289 + GA-rich Low_complexity Low_complexity 3 51 0 234 0 0 0 chr5 52432207 52432233 -147197917 + (CA)n Simple_repeat Simple_repeat 2 27 0 186 43 0 0 chr5 52432233 52432256 -147197894 + (CCA)n Simple_repeat Simple_repeat 1 23 0 251 279 88 29 chr5 52432339 52432475 -147197675 - MARNA DNA Mariner -114 472 329 32 57 0 0 chr5 52433812 52433865 -147196285 + AT_rich Low_complexity Low_complexity 1 53 0 256 345 55 9 chr5 52434849 52434959 -147195191 + L2 LINE L2 3146 3260 -12 * 389 255 47 9 chr5 52434952 52435058 -147195092 - L2 LINE L2 0 3313 3204 40 67 0 0 chr5 52436023 52436098 -147194052 + AT_rich Low_complexity Low_complexity 1 75 0 193 384 14 43 chr5 52436167 52436305 -147193845 + MIR SINE MIR 75 208 -54 224 250 113 12 chr5 52436451 52436531 -147193619 + L2 LINE L2 3225 3312 -1 180 0 0 0 chr5 52436560 52436580 -147193570 + (CATTT)n Simple_repeat Simple_repeat 1 20 0 2051 125 14 0 chr5 52436580 52436869 -147193281 - AluSx SINE Alu -19 293 1 1553 112 5 14 chr5 52437237 52437460 -147192690 + AluSc SINE Alu 44 264 -45 317 244 12 12 chr5 52439771 52439853 -147190297 - MIR SINE MIR -23 239 158 415 276 86 23 chr5 52439890 52440064 -147190086 - MIR SINE MIR -49 213 29 375 296 26 33 chr5 52440111 52440263 -147189887 + L1ME4a LINE L1 5596 5746 -424 231 256 83 30 chr5 52440508 52440641 -147189509 + L1ME4a LINE L1 5963 6102 -19 26 64 0 0 chr5 52442060 52442107 -147188043 + AT_rich Low_complexity Low_complexity 1 47 0 2144 136 3 0 chr5 52442140 52442450 -147187700 - AluSx SINE Alu -1 311 1 186 133 0 0 chr5 52442600 52442630 -147187520 + (TAA)n Simple_repeat Simple_repeat 3 32 0 21 57 0 0 chr5 52444676 52444711 -147185439 + AT_rich Low_complexity Low_complexity 1 35 0 231 103 0 0 chr5 52445174 52445213 -147184937 + (TAA)n Simple_repeat Simple_repeat 1 39 0 25 0 0 0 chr5 52445456 52445481 -147184669 + AT_rich Low_complexity Low_complexity 1 25 0 21 89 0 0 chr5 52445609 52445665 -147184485 + AT_rich Low_complexity Low_complexity 1 56 0 1807 137 0 0 chr5 52445717 52445979 -147184171 - AluSx SINE Alu -8 304 43 1732 178 39 0 chr5 52446567 52446898 -147183252 + MER2 DNA MER2_type 1 344 0 186 359 13 69 chr5 52446923 52447082 -147183068 - L2 LINE L2 -86 3186 3037 2546 108 11 0 chr5 52447107 52447458 -147182692 - THE1A LTR MaLR 0 355 1 21 57 0 0 chr5 52448169 52448204 -147181946 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 52448803 52448827 -147181323 + AT_rich Low_complexity Low_complexity 1 24 0 186 319 29 43 chr5 52451968 52452037 -147178113 - MIR SINE MIR -108 154 87 229 308 56 27 chr5 52452385 52452498 -147177652 - MIR SINE MIR -63 145 36 240 35 0 0 chr5 52454217 52454246 -147175904 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2461 79 0 19 chr5 52454254 52454572 -147175578 + AluSx SINE Alu 1 312 0 367 314 107 0 chr5 52454733 52454854 -147175296 - MIR3 SINE MIR -17 191 58 629 299 23 0 chr5 52455129 52455306 -147174844 - MER63A DNA MER1_type 0 210 30 576 189 53 53 chr5 52455464 52455596 -147174554 - FLAM_A SINE Alu 0 133 2 287 305 53 0 chr5 52455648 52455743 -147174407 - MIR SINE MIR -12 250 151 279 246 53 97 chr5 52455904 52456041 -147174109 - LTR33A LTR ERVL -2 521 394 1790 200 39 58 chr5 52456041 52456505 -147173645 - LTR16A1 LTR ERVL -2 455 1 279 246 53 97 chr5 52456505 52456574 -147173576 - LTR33A LTR ERVL -129 394 324 929 204 122 16 chr5 52456584 52456829 -147173321 + MER63 DNA MER1_type 12 282 -779 547 267 0 40 chr5 52456830 52456980 -147173170 - MIR SINE MIR -47 215 72 366 23 0 0 chr5 52457516 52457559 -147172591 + (CA)n Simple_repeat Simple_repeat 2 44 0 4289 181 103 14 chr5 52457663 52458676 -147171474 + Charlie1 DNA MER1_type 1566 2668 -93 749 262 129 19 chr5 52459345 52459608 -147170542 + MSTD LTR MaLR 66 357 -39 278 337 77 86 chr5 52459676 52460250 -147169900 + L2 LINE L2 2702 3272 0 557 284 138 30 chr5 52461842 52462074 -147168076 + MIR SINE MIR 6 262 0 21 0 0 0 chr5 52462849 52462870 -147167280 + AT_rich Low_complexity Low_complexity 1 21 0 322 262 60 0 chr5 52463060 52463144 -147167006 + L2 LINE L2 3184 3272 0 2337 87 6 3 chr5 52463249 52463560 -147166590 - AluSq SINE Alu -1 312 1 23 33 0 0 chr5 52463974 52464004 -147166146 + AT_rich Low_complexity Low_complexity 1 30 0 867 242 48 104 chr5 52465011 52465217 -147164933 + MLT1E LTR MaLR 1 217 -376 249 57 0 0 chr5 52465217 52465252 -147164898 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 867 242 48 104 chr5 52465252 52465286 -147164864 + MLT1E LTR MaLR 217 251 -342 1685 70 0 0 chr5 52465286 52465485 -147164665 - AluSx SINE Alu -113 199 1 867 242 48 104 chr5 52465485 52465664 -147164486 + MLT1E LTR MaLR 251 397 -196 1159 183 9 5 chr5 52465664 52465888 -147164262 - L1M4 LINE L1 -359 5815 5591 351 197 15 0 chr5 52465890 52465956 -147164194 + MLT1E LTR MaLR 527 593 0 1121 227 189 0 chr5 52466683 52466969 -147163181 + MSTD LTR MaLR 1 340 -56 28 29 0 0 chr5 52466969 52467004 -147163146 + AT_rich Low_complexity Low_complexity 1 35 0 3556 30 16 0 chr5 52467004 52467432 -147162718 - L1PA3 LINE L1 -3 6152 5718 6376 19 0 0 chr5 52467432 52468177 -147161973 + L1P LINE L1 4253 4997 -1149 460 120 27 0 chr5 52468177 52468252 -147161898 + MSTD LTR MaLR 379 455 -2 414 294 8 56 chr5 52468629 52468755 -147161395 - L2 LINE L2 0 3272 3153 2196 106 3 7 chr5 52468855 52469156 -147160994 - AluSc SINE Alu -9 300 1 458 245 44 19 chr5 52469888 52470047 -147160103 - L1MC5 LINE L1 -138 7823 7661 1598 175 4 0 chr5 52470109 52470366 -147159784 + AluJo SINE Alu 1 258 -54 186 43 0 0 chr5 52470376 52470399 -147159751 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 27 73 0 0 chr5 52470402 52470457 -147159693 + AT_rich Low_complexity Low_complexity 1 55 0 265 273 0 0 chr5 52471824 52471879 -147158271 - L2 LINE L2 -16 3256 3202 1172 23 0 0 chr5 52471937 52472070 -147158080 + AluY SINE Alu 164 296 -15 25 83 0 0 chr5 52472430 52472490 -147157660 + AT_rich Low_complexity Low_complexity 1 60 0 28 48 0 0 chr5 52472676 52472718 -147157432 + AT_rich Low_complexity Low_complexity 1 42 0 2622 40 37 0 chr5 52472734 52473059 -147157091 - MER41A LTR ERV1 -88 466 130 354 387 59 14 chr5 52473063 52473285 -147156865 + L1ME LINE L1 5438 5669 -452 215 343 43 0 chr5 52474159 52474229 -147155921 + L3 LINE CR1 37 109 -1468 637 291 105 12 chr5 52474325 52474572 -147155578 + L3 LINE CR1 324 593 -984 198 348 18 79 chr5 52474642 52474723 -147155427 + L2 LINE L2 3104 3172 -100 2551 71 0 0 chr5 52474723 52475032 -147155118 - AluSc SINE Alu 0 309 1 198 348 18 79 chr5 52475032 52475114 -147155036 + L2 LINE L2 3172 3257 -15 1258 324 115 24 chr5 52475125 52475909 -147154241 + L3 LINE CR1 660 1514 -63 822 144 24 0 chr5 52478350 52478475 -147151675 + AluJ SINE Alu 3 130 -172 6110 141 16 4 chr5 52478483 52479819 -147150331 + L1PB3 LINE L1 4799 6149 -5 1132 167 6 0 chr5 52479820 52480000 -147150150 + AluJ SINE Alu 121 301 -11 474 61 0 0 chr5 52480559 52480625 -147149525 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 2290 200 56 56 chr5 52481678 52482307 -147147843 - L1ME1 LINE L1 -4 6162 5534 770 152 46 0 chr5 52482917 52483068 -147147082 - L1ME1 LINE L1 -999 5147 4990 785 310 132 28 chr5 52483175 52483816 -147146334 - L1MEc LINE L1 -3414 2801 2133 200 188 0 0 chr5 52484205 52484237 -147145913 + (TG)n Simple_repeat Simple_repeat 1 32 0 461 309 157 52 chr5 52484276 52484797 -147145353 - HAL1 LINE L1 -1106 1401 826 282 56 0 0 chr5 52485753 52485789 -147144361 + (TG)n Simple_repeat Simple_repeat 2 37 0 204 250 0 19 chr5 52485824 52485876 -147144274 + L2 LINE L2 3262 3312 -1 219 299 112 19 chr5 52486572 52486679 -147143471 - MIR3 SINE MIR -87 121 5 585 260 27 7 chr5 52489682 52489832 -147140318 - MIR SINE MIR -29 233 81 388 228 40 40 chr5 52490260 52490361 -147139789 + L2 LINE L2 3172 3272 0 2150 123 10 0 chr5 52490666 52490968 -147139182 + AluSx SINE Alu 5 309 -3 212 394 77 0 chr5 52491541 52491645 -147138505 + L2 LINE L2 3125 3236 -36 23 33 0 0 chr5 52491781 52491811 -147138339 + AT_rich Low_complexity Low_complexity 1 30 0 189 0 0 0 chr5 52493969 52493990 -147136160 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 2214 100 0 0 chr5 52494989 52495298 -147134852 + AluSc SINE Alu 1 309 0 384 103 0 0 chr5 52495829 52495887 -147134263 + (CA)n Simple_repeat Simple_repeat 1 58 0 868 246 83 4 chr5 52496375 52496603 -147133547 + MIR SINE MIR 1 246 -16 208 265 59 49 chr5 52497136 52497238 -147132912 + MIR SINE MIR 156 258 -4 2341 89 0 0 chr5 52497563 52497865 -147132285 - AluY SINE Alu -9 302 1 200 352 0 14 chr5 52498363 52498434 -147131716 + MIR SINE MIR 37 106 -102 2374 77 0 0 chr5 52498748 52499034 -147131116 + AluSg SINE Alu 2 287 -23 227 296 86 25 chr5 52499604 52499685 -147130465 + MIR3 SINE MIR 114 199 -9 26 64 0 0 chr5 52501212 52501259 -147128891 + AT_rich Low_complexity Low_complexity 1 47 0 272 357 67 9 chr5 52501304 52501514 -147128636 - L1ME LINE L1 -338 5783 5562 348 24 0 0 chr5 52502141 52502182 -147127968 + (CA)n Simple_repeat Simple_repeat 2 42 0 6488 231 55 21 chr5 52502960 52505783 -147124367 - L1MEc LINE L1 -1891 4324 1439 180 246 0 0 chr5 52505829 52505898 -147124252 + (TA)n Simple_repeat Simple_repeat 2 70 0 1402 246 41 22 chr5 52505898 52506271 -147123879 - MLT2D LTR ERVL -40 480 1 1485 188 52 11 chr5 52506366 52506516 -147123634 - AluJo SINE Alu -30 282 115 180 0 0 0 chr5 52506516 52506536 -147123614 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1485 188 52 11 chr5 52506536 52506656 -147123494 - AluJo SINE Alu -197 115 1 406 255 41 31 chr5 52506664 52506860 -147123290 - L1MEc LINE L1 -4878 1337 1140 2635 269 72 24 chr5 52506867 52507759 -147122391 - L1MEc LINE L1 -5426 970 36 194 296 53 53 chr5 52507973 52508125 -147122025 + L2 LINE L2 1806 1957 -1357 472 237 44 9 chr5 52508222 52508336 -147121814 + L2 LINE L2 3195 3312 -1 182 304 71 109 chr5 52509752 52510018 -147120132 - L2 LINE L2 0 3272 3017 415 228 123 0 chr5 52510106 52510220 -147119930 + MER46C DNA MER2_type 1 128 -210 418 367 88 22 chr5 52510250 52510702 -147119448 + L2 LINE L2 2403 2884 -430 231 250 58 0 chr5 52510983 52511035 -147119115 + L2 LINE L2 3235 3289 -24 868 166 131 30 chr5 52511237 52511436 -147118714 - MER20 DNA MER1_type 0 219 1 2220 218 54 75 chr5 52512189 52512949 -147117201 + L1MC4 LINE L1 7299 8042 0 1571 142 0 16 chr5 52513122 52513368 -147116782 + AluSq SINE Alu 72 313 0 385 309 150 33 chr5 52513668 52514353 -147115797 + L2 LINE L2 2456 3272 0 2366 113 0 0 chr5 52515478 52515788 -147114362 - AluSp SINE Alu -3 310 1 1911 163 10 0 chr5 52515798 52516105 -147114045 - AluSx SINE Alu -2 310 1 217 239 31 113 chr5 52516105 52516257 -147113893 + L2 LINE L2 2153 2293 -1021 522 221 233 0 chr5 52519125 52519288 -147110862 - MIR SINE MIR -49 213 13 190 311 68 0 chr5 52519291 52519365 -147110785 + L3 LINE CR1 1239 1317 -260 * 282 255 78 88 chr5 52519358 52519460 -147110690 - MIR SINE MIR -86 122 22 2216 118 7 0 chr5 52519885 52520190 -147109960 + AluSx SINE Alu 1 307 -5 719 202 0 0 chr5 52521799 52521928 -147108222 + AluJo SINE Alu 1 129 -173 13816 26 0 0 chr5 52521930 52523766 -147106384 - L1PA2 LINE L1 -635 5520 3685 5761 11 0 0 chr5 52523766 52524409 -147105741 + L1PA2 LINE L1 5509 6152 -3 1260 125 22 0 chr5 52524427 52524611 -147105539 + AluJo SINE Alu 121 308 -4 249 370 152 21 chr5 52524954 52525197 -147104953 + L2 LINE L2 2566 2840 -474 24 0 0 0 chr5 52525273 52525297 -147104853 + AT_rich Low_complexity Low_complexity 1 24 0 420 318 39 72 chr5 52525334 52525639 -147104511 + L2 LINE L2 2886 3180 -92 271 273 218 0 chr5 52525790 52525900 -147104250 + MIR SINE MIR 128 261 -1 275 177 0 16 chr5 52529063 52529125 -147101025 - L1 LINE L1 -1879 4267 4207 * 4085 211 31 24 chr5 52529121 52530249 -147099901 + L1MB3 LINE L1 4302 5421 -762 2214 124 3 7 chr5 52530249 52530548 -147099602 + AluSx SINE Alu 1 298 -14 4085 211 31 24 chr5 52530548 52530577 -147099573 + L1MB3 LINE L1 5421 5448 -735 1334 189 96 32 chr5 52530577 52530920 -147099230 - MLT1A1 LTR MaLR 0 365 1 4085 211 31 24 chr5 52530920 52531637 -147098513 + L1MB3 LINE L1 5448 6183 0 2253 238 34 76 chr5 52531671 52532372 -147097778 + L2 LINE L2 2373 3052 -261 275 0 0 23 chr5 52532372 52532416 -147097734 + L1PA2 LINE L1 6112 6154 -1 2253 238 34 76 chr5 52532416 52532593 -147097557 + L2 LINE L2 3052 3235 -78 575 284 39 35 chr5 52532846 52533078 -147097072 - L2 LINE L2 -1231 2083 1851 245 284 118 83 chr5 52533134 52533483 -147096667 + L2 LINE L2 2185 2545 -769 2023 151 21 15 chr5 52533492 52533823 -147096327 + MER1B DNA MER1_type 1 333 -4 278 253 0 23 chr5 52533864 52533951 -147096199 + L2 LINE L2 3219 3303 -10 320 273 123 50 chr5 52535710 52535930 -147094220 - L1ME4a LINE L1 -2 6119 5884 499 206 53 23 chr5 52535946 52536077 -147094073 - MIR SINE MIR -106 156 22 228 244 64 0 chr5 52536177 52536255 -147093895 - L1ME4a LINE L1 -1979 5829 5747 182 347 21 69 chr5 52536282 52536426 -147093724 - MIR3 SINE MIR -5 203 67 346 258 80 129 chr5 52536460 52536724 -147093426 + MIR SINE MIR 12 262 0 21 0 0 0 chr5 52536863 52536884 -147093266 + AT_rich Low_complexity Low_complexity 1 21 0 16007 29 5 0 chr5 52537772 52540447 -147089703 + L1PA3 LINE L1 3476 6155 0 203 133 0 50 chr5 52540451 52540511 -147089639 + (A)n Simple_repeat Simple_repeat 1 57 0 2440 140 69 4 chr5 52541502 52541953 -147088197 + MER31A LTR ERV1 6 485 0 1971 181 86 25 chr5 52542346 52542822 -147087328 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr5 52543722 52543743 -147086407 + AT_rich Low_complexity Low_complexity 1 21 0 1153 127 0 6 chr5 52545073 52545239 -147084911 - AluSq SINE Alu -12 301 137 411 314 103 22 chr5 52545308 52545531 -147084619 - MIR SINE MIR -20 242 2 327 321 122 0 chr5 52546415 52546546 -147083604 - L2 LINE L2 -1 3271 3125 276 358 29 58 chr5 52546672 52546915 -147083235 - L2 LINE L2 -189 3083 2848 2100 276 96 16 chr5 52547643 52548520 -147081630 + HAL1 LINE L1 10 956 -1551 216 200 0 0 chr5 52548523 52548568 -147081582 + (CA)n Simple_repeat Simple_repeat 2 46 0 433 209 117 67 chr5 52548574 52548856 -147081294 + HAL1 LINE L1 1384 1679 -828 1330 249 62 62 chr5 52548859 52549467 -147080683 + HAL1 LINE L1 1724 2334 -173 231 36 0 0 chr5 52549467 52549495 -147080655 + (GA)n Simple_repeat Simple_repeat 2 29 0 1330 249 62 62 chr5 52549495 52549670 -147080480 + HAL1 LINE L1 2333 2507 0 289 331 92 8 chr5 52550906 52551036 -147079114 - MIR3 SINE MIR -18 190 50 2359 95 0 3 chr5 52551606 52551910 -147078240 - AluSq SINE Alu -10 303 1 742 195 166 0 chr5 52552188 52552357 -147077793 - MER58A DNA MER1_type -23 201 5 291 210 294 0 chr5 52552673 52552792 -147077358 - MLT1L LTR MaLR -458 157 4 431 293 67 7 chr5 52552986 52553136 -147077014 + MIR3 SINE MIR 37 195 -13 278 164 0 16 chr5 52554207 52554268 -147075882 + GA-rich Low_complexity Low_complexity 3 62 0 22 0 0 0 chr5 52554891 52554913 -147075237 + AT_rich Low_complexity Low_complexity 1 22 0 198 257 27 68 chr5 52555202 52555276 -147074874 + L2 LINE L2 427 497 -2817 180 0 0 0 chr5 52556773 52556793 -147073357 + (CA)n Simple_repeat Simple_repeat 2 21 0 23 33 0 0 chr5 52559051 52559081 -147071069 + AT_rich Low_complexity Low_complexity 1 30 0 227 226 19 0 chr5 52561693 52561746 -147068404 + (CATA)n Simple_repeat Simple_repeat 2 55 0 417 39 0 0 chr5 52561957 52562008 -147068142 + (CA)n Simple_repeat Simple_repeat 2 52 0 1643 125 16 16 chr5 52562957 52563213 -147066937 - AluSg SINE Alu -9 301 46 23 54 0 0 chr5 52563349 52563386 -147066764 + AT_rich Low_complexity Low_complexity 1 37 0 455 329 114 14 chr5 52565086 52565305 -147064845 + MIR SINE MIR 12 252 -10 2180 110 41 39 chr5 52566916 52567279 -147062871 + THE1B LTR MaLR 1 364 0 283 315 129 6 chr5 52567517 52567695 -147062455 - MIR SINE MIR -51 211 12 2172 90 17 0 chr5 52570220 52570545 -147059605 + AluSg SINE Alu 15 344 0 225 250 28 42 chr5 52571034 52571106 -147059044 - MIR SINE MIR -111 151 81 183 204 0 0 chr5 52571147 52571191 -147058959 + CT-rich Low_complexity Low_complexity 1 44 0 262 313 171 45 chr5 52571196 52571682 -147058468 + L2 LINE L2 2259 2805 -509 1255 191 67 54 chr5 52571715 52572086 -147058064 - MLT1B LTR MaLR -11 379 4 343 290 15 46 chr5 52572377 52572508 -147057642 + L2 LINE L2 3180 3306 -7 4905 171 150 6 chr5 52573025 52574135 -147056015 + Charlie1 DNA MER1_type 1 950 -1811 1962 113 34 0 chr5 52574135 52574427 -147055723 - AluSx SINE Alu -10 302 1 4905 171 150 6 chr5 52574427 52574579 -147055571 + Charlie1 DNA MER1_type 950 2752 -9 23 54 0 0 chr5 52574998 52575035 -147055115 + AT_rich Low_complexity Low_complexity 1 37 0 188 133 0 0 chr5 52575541 52575571 -147054579 - L2 LINE L2 -587 2727 2698 1836 130 72 0 chr5 52575632 52575908 -147054242 - AluJb SINE Alu -16 296 1 372 22 0 0 chr5 52576538 52576583 -147053567 + (CA)n Simple_repeat Simple_repeat 2 46 0 422 258 148 0 chr5 52576996 52577124 -147053026 + MLT1J LTR MaLR 45 191 -320 2612 94 0 27 chr5 52577162 52577536 -147052614 + THE1B LTR MaLR 1 364 0 26 30 0 0 chr5 52578146 52578179 -147051971 + AT_rich Low_complexity Low_complexity 1 33 0 252 266 120 82 chr5 52579048 52579206 -147050944 - MIR SINE MIR -70 192 29 1074 285 115 7 chr5 52579630 52580047 -147050103 + MLT1J LTR MaLR 1 462 -49 2673 30 0 0 chr5 52580082 52580383 -147049767 + AluY SINE Alu 1 301 -10 21 57 0 0 chr5 52580462 52580497 -147049653 + AT_rich Low_complexity Low_complexity 1 35 0 228 239 0 0 chr5 52580737 52580783 -147049367 + L2 LINE L2 3188 3233 -39 983 164 94 20 chr5 52580902 52581103 -147049047 + MER46A DNA MER2_type 17 232 -4 234 91 0 0 chr5 52582291 52582324 -147047826 + (CA)n Simple_repeat Simple_repeat 2 34 0 838 296 35 49 chr5 52582473 52582925 -147047225 + MLT1K LTR MaLR 43 488 -100 248 170 38 0 chr5 52583844 52583897 -147046253 - Charlie8 DNA MER1_type -2264 153 99 329 291 69 79 chr5 52584069 52584272 -147045878 + MIR3 SINE MIR 5 205 -3 44 46 0 0 chr5 52585008 52585073 -147045077 + AT_rich Low_complexity Low_complexity 1 65 0 275 277 34 113 chr5 52585587 52585729 -147044421 + MIR3 SINE MIR 23 150 -58 2158 125 3 0 chr5 52585729 52586024 -147044126 - AluSq SINE Alu -17 296 1 275 277 34 113 chr5 52586024 52586058 -147044092 + MIR3 SINE MIR 150 185 -23 392 330 68 40 chr5 52586489 52586843 -147043307 + L2 LINE L2 2230 2593 -721 558 155 77 52 chr5 52586909 52586931 -147043219 + MER106B DNA MER1_type 900 920 -139 447 19 0 0 chr5 52586931 52586983 -147043167 + (CA)n Simple_repeat Simple_repeat 1 52 0 558 155 77 52 chr5 52586983 52587115 -147043035 + MER106B DNA MER1_type 920 1058 -1 28 29 0 0 chr5 52587983 52588018 -147042132 + AT_rich Low_complexity Low_complexity 1 35 0 499 210 34 8 chr5 52588253 52588372 -147041778 + MLT1A2 LTR MaLR 1 122 -252 870 236 114 67 chr5 52588375 52588877 -147041273 + L2 LINE L2 2758 3309 -4 876 158 0 0 chr5 52589057 52589190 -147040960 + FLAM_C SINE Alu 1 133 0 180 0 0 0 chr5 52589809 52589829 -147040321 + (A)n Simple_repeat Simple_repeat 1 20 0 2387 151 39 10 chr5 52590087 52590503 -147039647 - MSTA LTR MaLR 0 428 1 231 296 170 30 chr5 52591733 52591868 -147038282 + MER5A DNA MER1_type 25 189 0 717 206 40 23 chr5 52591925 52592100 -147038050 + MER5B DNA MER1_type 1 178 0 752 222 106 59 chr5 52592749 52592857 -147037293 - LTR56 LTR ERV1 0 445 344 1892 145 10 10 chr5 52592857 52593161 -147036989 - AluJb SINE Alu -8 304 1 752 222 106 59 chr5 52593161 52593457 -147036693 - LTR56 LTR ERV1 -101 344 22 1919 152 7 0 chr5 52593730 52594026 -147036124 - AluJb SINE Alu -14 298 1 254 229 0 0 chr5 52594757 52594805 -147035345 + L2 LINE L2 3246 3293 -20 232 200 0 80 chr5 52595633 52595708 -147034442 + L1ME LINE L1 5483 5551 -570 1022 165 10 5 chr5 52595710 52595904 -147034246 + MER46B DNA MER2_type 1 70 -166 5511 196 58 31 chr5 52595909 52597478 -147032672 + L1 LINE L1 2841 4452 -1694 1484 165 38 38 chr5 52598183 52598474 -147031676 + AluJb SINE Alu 1 291 -21 192 241 0 0 chr5 52599362 52599420 -147030730 + (CA)n Simple_repeat Simple_repeat 1 58 0 203 221 132 15 chr5 52600909 52600977 -147029173 - MIR3 SINE MIR -52 156 81 194 328 0 16 chr5 52601588 52601649 -147028501 + L2 LINE L2 3249 3308 -5 228 284 25 25 chr5 52601761 52601842 -147028308 - MIR3 SINE MIR -27 181 101 208 358 106 16 chr5 52602419 52602542 -147027608 - MIR3 SINE MIR -22 186 53 334 315 0 0 chr5 52603801 52603890 -147026260 - L2 LINE L2 0 3313 3225 330 243 88 82 chr5 52603945 52604262 -147025888 + L2 LINE L2 2313 2631 -683 1808 243 66 30 chr5 52604270 52605187 -147024963 + L2 LINE L2 2363 3312 -1 685 264 98 0 chr5 52605977 52606151 -147023999 - MIR SINE MIR 0 262 72 237 290 70 10 chr5 52607115 52607215 -147022935 - MER5A DNA MER1_type -5 184 79 * 310 276 38 19 chr5 52607130 52607219 -147022931 + MER5A DNA MER1_type 35 128 -61 2151 133 0 0 chr5 52607219 52607528 -147022622 - AluY SINE Alu -2 309 1 310 276 38 19 chr5 52607528 52607543 -147022607 + MER5A DNA MER1_type 128 141 -48 331 247 132 32 chr5 52607607 52607797 -147022353 - Charlie2 DNA MER1_type -56 2806 2598 7638 41 2 0 chr5 52607797 52608793 -147021357 - L1P LINE L1 -4188 1958 961 4613 37 0 0 chr5 52608780 52609389 -147020761 + L1PA3 LINE L1 5564 6172 0 * 1755 209 111 28 chr5 52609389 52609770 -147020380 - Charlie2 DNA MER1_type -257 2605 2257 2208 96 0 16 chr5 52609770 52610082 -147020068 - AluSg SINE Alu -3 307 1 1755 209 111 28 chr5 52610082 52610392 -147019758 - Charlie2 DNA MER1_type -605 2257 1856 513 247 51 32 chr5 52610383 52610541 -147019609 - Charlie2 DNA MER1_type -2452 330 170 * 566 199 46 8 chr5 52610673 52610804 -147019346 - L2 LINE L2 0 3313 3178 2403 198 12 16 chr5 52610897 52611398 -147018752 + MLT2B3 LTR ERVL 10 508 -46 1528 177 43 22 chr5 52611418 52611740 -147018410 + MER2 DNA MER2_type 1 329 -16 369 0 0 0 chr5 52612043 52612084 -147018066 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 1503 200 0 37 chr5 52612090 52612390 -147017760 - AluJo SINE Alu -23 289 1 1079 213 8 4 chr5 52613430 52613665 -147016485 + L1MC4 LINE L1 7380 7615 -427 481 268 30 54 chr5 52613764 52613932 -147016218 + MIR SINE MIR 92 255 -7 186 340 60 30 chr5 52613965 52614065 -147016085 - L2 LINE L2 -54 3218 3116 2112 119 11 0 chr5 52614754 52615039 -147015111 + AluSg SINE Alu 1 288 -22 549 303 100 18 chr5 52615413 52615753 -147014397 + MLT1J LTR MaLR 1 368 -143 28 0 0 0 chr5 52615792 52615820 -147014330 + AT_rich Low_complexity Low_complexity 1 28 0 2053 69 4 36 chr5 52615820 52616094 -147014056 - AluY SINE Alu -10 301 37 581 163 184 0 chr5 52616094 52616192 -147013958 - FLAM_A SINE Alu -17 116 1 2433 176 52 48 chr5 52616690 52617185 -147012965 + MLT1D LTR MaLR 1 497 -8 224 250 0 24 chr5 52617266 52617350 -147012800 + (TAA)n Simple_repeat Simple_repeat 2 83 0 2562 53 0 3 chr5 52617607 52617910 -147012240 + AluY SINE Alu 1 302 -9 1799 161 11 35 chr5 52619420 52619767 -147010383 - MLT1A2 LTR MaLR -18 356 18 189 324 84 0 chr5 52619864 52619935 -147010215 - L2 LINE L2 -23 3249 3173 982 321 52 18 chr5 52619995 52620434 -147009716 + LTR16B LTR ERVL 1 454 -10 316 298 39 48 chr5 52620643 52620747 -147009403 - L2 LINE L2 -14 3258 3156 2207 84 46 0 chr5 52621280 52621564 -147008586 - AluSq SINE Alu -16 297 1 993 171 83 34 chr5 52621612 52621817 -147008333 - MER20 DNA MER1_type -4 215 1 1207 243 55 53 chr5 52621896 52622352 -147007798 - L1ME3A LINE L1 -219 5951 5495 665 236 140 78 chr5 52623911 52624247 -147005903 + MLT1J LTR MaLR 88 454 -57 1823 173 0 3 chr5 52624247 52624542 -147005608 - AluJb SINE Alu -18 294 1 665 236 140 78 chr5 52624542 52624604 -147005546 + MLT1J LTR MaLR 454 511 0 28 0 0 0 chr5 52625077 52625105 -147005045 + AT_rich Low_complexity Low_complexity 1 28 0 202 288 45 147 chr5 52626986 52627004 -147003146 - L2 LINE L2 -12 3260 3242 1878 137 0 42 chr5 52627004 52627317 -147002833 - AluJb SINE Alu -12 300 1 202 288 45 147 chr5 52627317 52627652 -147002498 - L2 LINE L2 -30 3242 2943 683 254 102 19 chr5 52628349 52628554 -147001596 + MLT1J LTR MaLR 100 321 -190 635 204 130 28 chr5 52629321 52629537 -147000613 - L2 LINE L2 -1 3312 3075 733 229 13 0 chr5 52629777 52629930 -147000220 + MIR SINE MIR 41 195 -67 2192 103 0 17 chr5 52630442 52630742 -146999408 - AluSc SINE Alu -13 296 2 30 27 0 0 chr5 52630749 52630786 -146999364 + AT_rich Low_complexity Low_complexity 1 37 0 1192 196 30 1 chr5 52631404 52631694 -146998456 + MER2 DNA MER2_type 9 344 -1 304 356 58 31 chr5 52631792 52632017 -146998133 + L2 LINE L2 2585 2815 -499 22 0 0 0 chr5 52633476 52633498 -146996652 + AT_rich Low_complexity Low_complexity 1 22 0 400 275 83 9 chr5 52633706 52633815 -146996335 - L3 LINE CR1 -2 1575 1459 1826 83 63 4 chr5 52633966 52634218 -146995932 - AluSx SINE Alu -11 301 35 663 286 12 0 chr5 52634339 52634500 -146995650 + MER58A DNA MER1_type 1 163 0 183 267 0 0 chr5 52634574 52634619 -146995531 + L2 LINE L2 3263 3307 -6 451 235 255 50 chr5 52636421 52636621 -146993529 - MIR SINE MIR -11 251 11 208 207 86 35 chr5 52636638 52636696 -146993454 - L2 LINE L2 -9 3263 3203 452 254 8 39 chr5 52636799 52636929 -146993221 - MER91A DNA MER1_type -70 126 1 2378 47 4 0 chr5 52637925 52638203 -146991947 - AluY SINE Alu -17 294 16 463 284 120 24 chr5 52638677 52639018 -146991132 + L2 LINE L2 1721 2094 -1220 1811 162 9 19 chr5 52639024 52639339 -146990811 - AluJb SINE Alu 0 312 1 335 301 162 9 chr5 52639496 52639720 -146990430 + MIR SINE MIR 8 260 -2 2278 99 7 3 chr5 52639722 52640024 -146990126 - AluSc SINE Alu -6 303 1 256 325 115 13 chr5 52640049 52640206 -146989944 + L2 LINE L2 2253 2425 -889 872 323 114 28 chr5 52640235 52640736 -146989414 + MLT1H1 LTR MaLR 12 555 0 450 307 88 13 chr5 52640737 52640975 -146989175 + L2 LINE L2 2435 2690 -624 363 335 103 70 chr5 52641028 52641386 -146988764 + L2 LINE L2 2828 3197 -75 382 338 49 20 chr5 52642425 52642629 -146987521 + MIR SINE MIR 25 234 -28 214 305 17 0 chr5 52642629 52642688 -146987462 - L2 LINE L2 -31 3241 3182 392 206 122 144 chr5 52642752 52642932 -146987218 - MER45A DNA AcHobo -2 176 1 1791 141 45 4 chr5 52643377 52643646 -146986504 + AluSx SINE Alu 1 280 -32 493 126 58 0 chr5 52643731 52643874 -146986276 + AluJ/FRAM SINE Alu 216 363 0 273 119 0 0 chr5 52643868 52643910 -146986240 + (GGGGA)n Simple_repeat Simple_repeat 5 46 0 * 365 187 30 12 chr5 52644368 52644511 -146985639 + MIR SINE MIR 47 252 -10 1647 80 0 0 chr5 52645355 52645554 -146984596 + AluSq SINE Alu 1 199 -114 345 148 0 0 chr5 52645555 52645616 -146984534 + AluSq SINE Alu 241 301 -2 1949 127 14 83 chr5 52645637 52646000 -146984150 - MER44D DNA MER2_type 0 609 2 236 211 0 0 chr5 52646279 52646331 -146983819 + L2 LINE L2 3262 3313 0 2203 104 17 0 chr5 52646529 52646828 -146983322 - AluSx SINE Alu -8 304 1 204 245 38 19 chr5 52647009 52647062 -146983088 - L3 LINE CR1 -8 1569 1516 21 0 0 0 chr5 52648110 52648131 -146982019 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 52648527 52648555 -146981595 + AT_rich Low_complexity Low_complexity 1 28 0 1527 151 4 11 chr5 52652271 52652536 -146977614 - AluJb SINE Alu -17 295 33 2535 104 45 22 chr5 52653613 52653969 -146976181 + THE1B LTR MaLR 1 364 0 313 224 112 0 chr5 52654328 52654435 -146975715 - L1ME LINE L1 -397 5724 5606 2403 81 3 13 chr5 52654436 52654744 -146975406 - AluSc SINE Alu -4 305 1 316 267 338 9 chr5 52657242 52657452 -146972698 - L2 LINE L2 0 3313 3035 644 198 0 0 chr5 52657469 52657575 -146972575 + MER3 DNA MER1_type 8 113 -96 583 276 76 49 chr5 52657624 52657928 -146972222 + HAL1 LINE L1 3 314 -2193 909 283 122 28 chr5 52657986 52658354 -146971796 + L1M4 LINE L1 3540 3872 -2274 2210 167 21 21 chr5 52658354 52658743 -146971407 - MLT1B LTR MaLR -1 389 1 909 283 122 28 chr5 52658743 52659100 -146971050 + L1M4 LINE L1 3872 4350 -1796 389 209 114 0 chr5 52659195 52659300 -146970850 + L1M4 LINE L1 4475 4591 -1555 799 220 81 30 chr5 52659440 52659676 -146970474 + MIR SINE MIR 9 256 -6 276 343 108 16 chr5 52660249 52660628 -146969522 - L1ME LINE L1 -960 5186 4773 198 0 0 0 chr5 52661001 52661023 -146969127 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1475 157 134 0 chr5 52661026 52661287 -146968863 - AluJo SINE Alu -16 296 1 532 206 76 60 chr5 52662124 52662308 -146967842 + MIR SINE MIR 2 188 -74 2201 117 10 0 chr5 52662317 52662617 -146967533 + AluSx SINE Alu 1 303 -9 595 285 87 50 chr5 52665260 52665502 -146964648 + MIR SINE MIR 2 252 -10 963 285 58 17 chr5 52666982 52667343 -146962807 + LTR33 LTR ERVL 135 510 -11 891 316 80 29 chr5 52667648 52668066 -146962084 - MLT2F LTR ERVL -44 619 165 2324 89 7 3 chr5 52668066 52668369 -146961781 - AluSx SINE Alu -8 304 1 891 316 80 29 chr5 52668369 52668500 -146961650 - MLT2F LTR ERVL -498 165 42 6246 251 57 23 chr5 52668641 52668909 -146961241 - ERVL-F LTR ERVL -332 5432 5174 1736 221 28 32 chr5 52668909 52669199 -146960951 - MLT1C LTR MaLR -2 465 176 2161 149 0 0 chr5 52669199 52669508 -146960642 - AluSx SINE Alu -3 309 1 1736 221 28 32 chr5 52669508 52669684 -146960466 - MLT1C LTR MaLR -291 176 1 6246 251 57 23 chr5 52669684 52671258 -146958892 - ERVL-F LTR ERVL -590 5174 3528 8328 228 60 27 chr5 52674018 52678950 -146951200 + L1M2b LINE L1 1019 6260 -948 1965 145 0 0 chr5 52679257 52679567 -146950583 - AluSx SINE Alu 0 310 1 549 88 25 0 chr5 52679728 52679808 -146950342 - L1MB4 LINE L1 -44 6136 6055 241 300 200 21 chr5 52680256 52680396 -146949754 - MIR3 SINE MIR -14 194 30 604 230 140 31 chr5 52681107 52681329 -146948821 + ORSL DNA AcHobo 1 246 -29 1762 166 18 6 chr5 52681539 52681611 -146948539 - MER2 DNA MER2_type -10 335 265 2230 102 7 3 chr5 52681611 52681905 -146948245 + AluSg SINE Alu 1 295 -15 1762 166 18 6 chr5 52681905 52682163 -146947987 - MER2 DNA MER2_type -80 265 1 414 265 102 42 chr5 52682324 52682407 -146947743 + MLT1L LTR MaLR 362 439 -176 1521 147 121 22 chr5 52682407 52682718 -146947432 - AluJb SINE Alu 0 302 1 414 265 102 42 chr5 52682718 52682849 -146947301 + MLT1L LTR MaLR 439 589 -26 377 245 162 60 chr5 52682890 52683109 -146947041 + L1ME LINE L1 4288 4540 -1606 1836 180 7 3 chr5 52683109 52683409 -146946741 + AluJo SINE Alu 1 301 -11 377 245 162 60 chr5 52683409 52683454 -146946696 + L1ME LINE L1 4540 4579 -1567 330 116 20 0 chr5 52683520 52683583 -146946567 - L1ME3A LINE L1 -7 6155 6094 354 293 149 10 chr5 52683891 52684099 -146946051 + L1ME LINE L1 4995 5231 -915 489 209 19 0 chr5 52684210 52684315 -146945835 - LTR16A1 LTR ERVL 0 457 351 180 0 0 0 chr5 52684315 52684335 -146945815 + (CAGGA)n Simple_repeat Simple_repeat 1 20 0 645 174 92 157 chr5 52684465 52684489 -146945661 - MER57A LTR ERV1 -12 391 367 1894 169 7 0 chr5 52684489 52684796 -146945354 + AluJo SINE Alu 1 309 -3 645 174 92 157 chr5 52684796 52685186 -146944964 - MER57A LTR ERV1 -36 367 4 2891 108 19 2 chr5 52685260 52685687 -146944463 + MER57B LTR ERV1 1 434 0 1648 148 4 4 chr5 52685688 52685951 -146944199 + MER57B-int LTR ERV1 1 263 -7274 * 4748 130 49 9 chr5 52685949 52686879 -146943271 + MER57B-int LTR ERV1 946 2017 -3929 13834 118 44 24 chr5 52686907 52688019 -146942131 + MER57B-int LTR ERV1 2186 3275 -4262 2700 17 0 0 chr5 52688019 52688312 -146941838 + AluYa5 SINE Alu 10 302 -9 13834 118 44 24 chr5 52688312 52688678 -146941472 + MER57B-int LTR ERV1 3275 3632 -3905 180 0 0 0 chr5 52688678 52688698 -146941452 + (TA)n Simple_repeat Simple_repeat 1 20 0 13834 118 44 24 chr5 52688698 52690918 -146939232 + MER57B-int LTR ERV1 3632 7153 -384 430 185 92 25 chr5 52690918 52691037 -146939113 + LTR54B LTR ERV1 5 131 -367 1302 126 126 0 chr5 52691037 52691267 -146938883 + MER57B-int LTR ERV1 7279 7537 0 2890 115 2 20 chr5 52691267 52691709 -146938441 + MER57B LTR ERV1 1 434 0 256 333 16 8 chr5 52691775 52691901 -146938249 - LTR16A1 LTR ERVL -330 127 1 446 236 32 73 chr5 52692178 52692415 -146937735 + L1ME LINE L1 5417 5659 -462 5492 132 17 12 chr5 52692545 52693256 -146936894 - L1P4 LINE L1 -443 5725 5019 2297 131 6 16 chr5 52693256 52693622 -146936528 + THE1B LTR MaLR 3 364 0 10411 112 36 13 chr5 52693622 52695164 -146934986 + THE1B-int LTR MaLR 1 1578 -2 2568 99 8 6 chr5 52695166 52695529 -146934621 + THE1B LTR MaLR 1 364 0 5492 132 17 12 chr5 52695529 52696254 -146933896 - L1P4 LINE L1 -1149 5019 4288 3675 62 19 0 chr5 52696254 52696735 -146933415 + L1PA13 LINE L1 5668 6159 -4 2151 135 0 3 chr5 52697145 52697449 -146932701 + AluSx SINE Alu 1 303 -9 513 204 9 9 chr5 52697669 52697782 -146932368 - LTR33 LTR ERVL 0 521 409 573 264 39 28 chr5 52698009 52698187 -146931963 - MLT1I LTR MaLR -191 218 39 2139 99 32 0 chr5 52698189 52698471 -146931679 + AluSx SINE Alu 1 291 -21 1336 174 20 8 chr5 52698593 52698901 -146931249 + MER33 DNA MER1_type 1 302 -22 665 301 112 43 chr5 52699719 52700230 -146929920 - MLT2E LTR ERVL -49 579 34 220 300 75 0 chr5 52700883 52700963 -146929187 + MIR3 SINE MIR 92 177 -31 1362 184 0 0 chr5 52701188 52701411 -146928739 + MER58A DNA MER1_type 1 223 -1 326 233 56 56 chr5 52701574 52701664 -146928486 + MIR SINE MIR 36 125 -137 296 285 73 16 chr5 52702433 52702556 -146927594 - MIR3 SINE MIR -64 144 15 206 284 64 28 chr5 52702553 52702662 -146927488 + MIR SINE MIR 31 143 -119 * 287 326 15 15 chr5 52702804 52702936 -146927214 + MLT1L LTR MaLR 116 247 -368 1684 261 146 9 chr5 52703106 52704012 -146926138 - L2 LINE L2 -3 3310 2275 262 258 233 0 chr5 52704071 52704191 -146925959 + MIR SINE MIR 73 220 -42 331 213 62 0 chr5 52704392 52704472 -146925678 - MIR SINE MIR -102 160 76 7007 57 2 0 chr5 52704819 52706408 -146923742 + L1PA7 LINE L1 4550 6140 -14 196 27 54 27 chr5 52706416 52706453 -146923697 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2345 115 0 0 chr5 52706559 52706871 -146923279 + AluSx SINE Alu 1 312 0 225 284 114 0 chr5 52707044 52707132 -146923018 - MIR SINE MIR -1 261 164 1551 240 24 22 chr5 52707230 52707693 -146922457 - L1MB7 LINE L1 -10 6174 5711 391 305 0 17 chr5 52707697 52707815 -146922335 - MIR SINE MIR -119 143 28 26 0 0 0 chr5 52707887 52707913 -146922237 + AT_rich Low_complexity Low_complexity 1 26 0 13238 181 31 22 chr5 52708428 52711713 -146918437 - L1MB3 LINE L1 -15 6404 3151 2127 116 0 7 chr5 52711713 52712007 -146918143 - AluSc SINE Alu -17 292 1 13238 181 31 22 chr5 52712007 52712313 -146917837 - L1MB3 LINE L1 -3268 3151 2849 198 0 0 0 chr5 52712313 52712335 -146917815 + (TA)n Simple_repeat Simple_repeat 2 23 0 2721 26 0 0 chr5 52712335 52712644 -146917506 - AluYb8 SINE Alu -9 309 1 13238 181 31 22 chr5 52712644 52714382 -146915768 - L1MB3 LINE L1 -3570 2849 1002 216 0 0 0 chr5 52714392 52714416 -146915734 + (TTGG)n Simple_repeat Simple_repeat 4 27 0 1687 179 3 17 chr5 52714416 52714701 -146915449 - AluJb SINE Alu -29 283 1 13238 181 31 22 chr5 52714701 52715698 -146914452 - L1MB3 LINE L1 -5417 1002 16 1262 195 205 85 chr5 52715763 52715915 -146914235 + MLT1F LTR MaLR 1 133 -409 1723 193 0 13 chr5 52715915 52716242 -146913908 + AluJo SINE Alu 1 312 0 1262 195 205 85 chr5 52716242 52716572 -146913578 + MLT1F LTR MaLR 133 541 -1 2273 174 13 7 chr5 52716681 52716959 -146913191 + L1MB4 LINE L1 5561 5845 -338 1019 149 149 14 chr5 52716959 52717167 -146912983 + MER46A DNA MER2_type 1 236 0 2273 174 13 7 chr5 52717167 52717337 -146912813 + L1MB4 LINE L1 5845 6012 -171 4649 90 13 0 chr5 52717337 52717970 -146912180 - L1PA13 LINE L1 -5 6158 5518 996 92 92 0 chr5 52717972 52718135 -146912015 + L1MB4 LINE L1 6002 6179 -1 2493 188 157 117 chr5 52718244 52719225 -146910925 + LTR28 LTR ERV1 1 1020 0 275 215 15 0 chr5 52719325 52719390 -146910760 + CT-rich Low_complexity Low_complexity 1 66 0 217 289 161 34 chr5 52720194 52720343 -146909807 + MIR SINE MIR 78 245 -17 7067 57 11 16 chr5 52720869 52722406 -146907744 + SVA Other Other 1 1413 0 249 180 98 0 chr5 52722630 52722691 -146907459 + MLT1J2 LTR MaLR 381 447 -3 1926 153 17 3 chr5 52723067 52723354 -146906796 - AluSx SINE Alu -21 291 1 249 325 40 40 chr5 52723708 52723834 -146906316 + L2 LINE L2 2924 3049 -223 2398 130 90 9 chr5 52723970 52724394 -146905756 - LTR24 LTR ERV1 0 467 10 1338 206 16 41 chr5 52726516 52726898 -146903252 + MLT1A1 LTR MaLR 1 457 0 1476 149 14 31 chr5 52726923 52727211 -146902939 + L1MC1 LINE L1 6051 6333 0 1070 219 26 13 chr5 52728022 52728250 -146901900 + MIR SINE MIR 32 262 0 24 0 0 0 chr5 52728997 52729021 -146901129 + AT_rich Low_complexity Low_complexity 1 24 0 999 171 20 5 chr5 52729117 52729316 -146900834 + MER3 DNA MER1_type 7 208 -1 598 240 57 57 chr5 52729388 52729467 -146900683 - MER5B DNA MER1_type 0 178 100 2290 113 33 28 chr5 52729467 52729829 -146900321 - THE1B LTR MaLR 0 364 1 598 240 57 57 chr5 52729829 52729924 -146900226 - MER5B DNA MER1_type -77 101 4 201 297 0 95 chr5 52729924 52729963 -146900187 + L3b LINE CR1 1533 1564 -19 198 0 0 0 chr5 52730656 52730678 -146899472 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 1953 140 37 20 chr5 52730784 52731134 -146899016 + THE1B LTR MaLR 8 363 -1 245 254 64 59 chr5 52731174 52731410 -146898740 + L1ME3A LINE L1 4783 5019 -1127 300 223 115 54 chr5 52731468 52731616 -146898534 + L1ME3A LINE L1 5094 5250 -896 642 295 69 20 chr5 52731695 52732223 -146897927 + L1ME3A LINE L1 5371 5950 -220 2000 135 26 0 chr5 52732454 52732758 -146897392 + AluSx SINE Alu 1 312 0 5813 113 28 3 chr5 52732966 52734740 -146895410 - L1PA13 LINE L1 -7 6156 4357 693 189 41 0 chr5 52735729 52735851 -146894299 + MER5A DNA MER1_type 1 127 -62 225 0 0 0 chr5 52735896 52735921 -146894229 + (CAAAC)n Simple_repeat Simple_repeat 1 25 0 185 286 169 73 chr5 52736324 52736502 -146893648 - L2 LINE L2 -107 3165 2971 230 267 0 35 chr5 52737222 52737308 -146892842 - MER20B DNA MER1_type -2 781 699 496 245 29 15 chr5 52737398 52737644 -146892506 - MER20B DNA MER1_type -193 590 290 186 296 0 0 chr5 52737644 52737715 -146892435 + T-rich Low_complexity Low_complexity 1 71 0 * 714 179 17 6 chr5 52737708 52737881 -146892269 + CT-rich Low_complexity Low_complexity 3 177 0 302 282 69 8 chr5 52737912 52738043 -146892107 - MER20B DNA MER1_type -538 245 107 286 229 55 28 chr5 52738548 52738657 -146891493 - LTR33 LTR ERVL 0 521 410 2322 101 0 0 chr5 52738761 52739058 -146891092 + AluSq SINE Alu 1 297 -16 349 252 26 0 chr5 52739190 52739305 -146890845 - LTR33 LTR ERVL -388 133 16 2113 121 0 7 chr5 52739776 52740066 -146890084 + AluSx SINE Alu 1 288 -24 1700 88 0 5 chr5 52740210 52740425 -146889725 + AluY SINE Alu 74 287 -24 217 82 41 20 chr5 52740435 52740484 -146889666 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 297 294 69 44 chr5 52740578 52740767 -146889383 + MIR3 SINE MIR 2 192 -40 469 206 10 29 chr5 52740821 52740923 -146889227 + MER5A DNA MER1_type 1 100 -89 2469 76 0 3 chr5 52741324 52741628 -146888522 + AluY SINE Alu 1 303 -8 1108 174 50 24 chr5 52741742 52742052 -146888098 + MLT1F1 LTR MaLR 157 544 -23 363 329 26 10 chr5 52742064 52742324 -146887826 + MLT1F-int LTR MaLR 3 384 -987 476 330 11 5 chr5 52742665 52742850 -146887300 + MLT1F-int LTR MaLR 699 884 -487 754 165 9 0 chr5 52742941 52743056 -146887094 + FLAM_C SINE Alu 2 117 -16 287 96 19 0 chr5 52743253 52743305 -146886845 + (TG)n Simple_repeat Simple_repeat 2 54 0 422 252 48 87 chr5 52743311 52743517 -146886633 + MLT1F-int LTR MaLR 1174 1371 0 1524 194 188 44 chr5 52743517 52743991 -146886159 + MLT1F LTR MaLR 1 542 0 2226 91 3 10 chr5 52745348 52745645 -146884505 - AluSx SINE Alu -4 308 14 26 50 0 0 chr5 52747895 52747935 -146882215 + AT_rich Low_complexity Low_complexity 1 40 0 1364 197 28 8 chr5 52749098 52749352 -146880798 - AluJo SINE Alu -10 302 44 21 36 0 0 chr5 52750120 52750148 -146880002 + AT_rich Low_complexity Low_complexity 1 28 0 1688 154 3 41 chr5 52750300 52750593 -146879557 + AluJo SINE Alu 1 282 -30 2483 48 0 7 chr5 52751157 52751452 -146878698 + AluY SINE Alu 1 293 -18 1151 85 9 121 chr5 52751468 52751607 -146878543 + MSTC LTR MaLR 227 380 -48 1977 150 0 22 chr5 52751607 52751920 -146878230 + AluSx SINE Alu 1 306 -6 1151 85 9 121 chr5 52751920 52751935 -146878215 + MSTC LTR MaLR 380 395 -33 1967 159 0 3 chr5 52751935 52752236 -146877914 + AluJb SINE Alu 1 300 -12 1151 85 9 121 chr5 52752236 52752304 -146877846 + MSTC LTR MaLR 395 425 -3 2433 80 0 10 chr5 52752738 52753050 -146877100 + AluSc SINE Alu 1 309 0 280 227 0 30 chr5 52755292 52755358 -146874792 + MIR SINE MIR 127 190 -72 234 0 0 0 chr5 52756122 52756148 -146874002 + (A)n Simple_repeat Simple_repeat 1 26 0 1996 133 3 30 chr5 52756541 52756843 -146873307 - AluSx SINE Alu -18 294 1 2472 70 0 16 chr5 52757191 52757505 -146872645 + AluY SINE Alu 1 309 -2 33 43 0 0 chr5 52760133 52760180 -146869970 + AT_rich Low_complexity Low_complexity 1 47 0 2387 88 0 19 chr5 52760750 52761068 -146869082 + AluSx SINE Alu 1 312 0 317 313 116 0 chr5 52761229 52761341 -146868809 - MIR3 SINE MIR -17 191 67 205 240 0 20 chr5 52813131 52813181 -146816969 + CT-rich Low_complexity Low_complexity 5 53 0 23 33 0 0 chr5 52815340 52815370 -146814780 + AT_rich Low_complexity Low_complexity 1 30 0 1153 127 0 6 chr5 52816255 52816421 -146813729 - AluSq SINE Alu -12 301 137 411 314 103 22 chr5 52816490 52816713 -146813437 - MIR SINE MIR -20 242 2 212 196 0 18 chr5 52817765 52817821 -146812329 + CT-rich Low_complexity Low_complexity 4 58 0 318 244 12 12 chr5 52819595 52819677 -146810473 - MIR SINE MIR -23 239 158 415 276 86 23 chr5 52819714 52819888 -146810262 - MIR SINE MIR -49 213 29 375 296 26 33 chr5 52819935 52820087 -146810063 + L1ME LINE L1 5596 5746 -424 2242 275 94 22 chr5 52821441 52822333 -146807817 + HAL1 LINE L1 1 956 -1551 216 200 0 0 chr5 52822336 52822381 -146807769 + (CA)n Simple_repeat Simple_repeat 2 46 0 1120 240 98 41 chr5 52822387 52823238 -146806912 + HAL1 LINE L1 1384 2321 -186 304 256 8 60 chr5 52823832 52823949 -146806201 + L2 LINE L2 3125 3235 -78 587 280 39 35 chr5 52824202 52824434 -146805716 - L2 LINE L2 -1231 2083 1851 248 284 118 83 chr5 52824490 52824839 -146805311 + L2 LINE L2 2185 2545 -769 2004 151 21 15 chr5 52824848 52825179 -146804971 + MER1B DNA MER1_type 1 333 -4 282 253 0 23 chr5 52825220 52825307 -146804843 + L2 LINE L2 3219 3303 -10 21 57 0 0 chr5 52827783 52827818 -146802332 + AT_rich Low_complexity Low_complexity 1 35 0 231 103 0 0 chr5 52828281 52828320 -146801830 + (TAA)n Simple_repeat Simple_repeat 1 39 0 25 0 0 0 chr5 52828563 52828588 -146801562 + AT_rich Low_complexity Low_complexity 1 25 0 334 191 15 0 chr5 52828835 52828903 -146801247 - Alu SINE Alu 0 300 232 201 263 53 102 chr5 52829092 52829377 -146800773 - L2 LINE L2 -731 2583 2313 330 315 0 0 chr5 52829432 52829521 -146800629 + L2 LINE L2 3225 3313 0 208 358 106 16 chr5 52830782 52830905 -146799245 + MIR3 SINE MIR 53 186 -22 229 284 25 25 chr5 52831482 52831563 -146798587 + MIR3 SINE MIR 101 181 -27 197 328 0 16 chr5 52831675 52831736 -146798414 - L2 LINE L2 -5 3308 3249 26 64 0 0 chr5 52832312 52832359 -146797791 + AT_rich Low_complexity Low_complexity 1 47 0 227 296 86 25 chr5 52833929 52834010 -146796140 - MIR3 SINE MIR -9 199 114 2327 84 0 0 chr5 52834580 52834866 -146795284 - AluSg SINE Alu -23 287 2 402 21 0 0 chr5 52836430 52836477 -146793673 + (CA)n Simple_repeat Simple_repeat 2 48 0 4536 234 57 17 chr5 52837255 52838683 -146791467 - L1M4 LINE L1 -1891 4255 2771 190 257 27 68 chr5 52840202 52840276 -146789874 - L2 LINE L2 -2817 497 427 22 0 0 0 chr5 52840565 52840587 -146789563 + AT_rich Low_complexity Low_complexity 1 22 0 278 164 0 16 chr5 52841210 52841271 -146788879 + CT-rich Low_complexity Low_complexity 3 62 0 415 260 6 103 chr5 52841812 52842143 -146788007 - L1M4 LINE L1 -2031 4115 3817 241 315 126 9 chr5 52842722 52842833 -146787317 - L2 LINE L2 -5 3267 3144 2015 148 0 0 chr5 52843516 52843799 -146786351 + AluSx SINE Alu 3 285 -27 24 85 0 0 chr5 52844646 52844705 -146785445 + AT_rich Low_complexity Low_complexity 1 59 0 28 48 0 0 chr5 52844891 52844933 -146785217 + AT_rich Low_complexity Low_complexity 1 42 0 2600 43 37 0 chr5 52844949 52845274 -146784876 - MER41A LTR ERV1 -88 466 130 354 387 59 14 chr5 52845278 52845500 -146784650 + L1ME LINE L1 5438 5669 -452 215 343 43 0 chr5 52846374 52846444 -146783706 + L3 LINE CR1 37 109 -1468 637 291 105 12 chr5 52846540 52846787 -146783363 + L3 LINE CR1 324 593 -984 2527 74 0 0 chr5 52846941 52847250 -146782900 - AluSc SINE Alu 0 309 1 1258 322 116 24 chr5 52847343 52848126 -146782024 + L3 LINE CR1 660 1514 -63 290 331 92 8 chr5 52849410 52849540 -146780610 - MIR3 SINE MIR -18 190 50 2339 95 0 3 chr5 52850111 52850415 -146779735 - AluSq SINE Alu -10 303 1 801 195 166 0 chr5 52850693 52850862 -146779288 - MER58A DNA MER1_type -23 201 5 5645 17 0 0 chr5 52851831 52852486 -146777664 + L1P LINE L1 4343 4997 -1149 460 120 27 0 chr5 52852486 52852561 -146777589 + MSTB2 LTR MaLR 379 455 -2 414 294 8 56 chr5 52852938 52853064 -146777086 - L2 LINE L2 0 3272 3153 2196 106 3 7 chr5 52853164 52853465 -146776685 - AluSc SINE Alu -9 300 1 458 245 44 19 chr5 52854197 52854356 -146775794 - L1MC5 LINE L1 -138 7823 7661 1425 180 12 4 chr5 52854418 52854674 -146775476 + AluJo SINE Alu 1 258 -54 28 71 0 0 chr5 52854713 52854769 -146775381 + AT_rich Low_complexity Low_complexity 1 56 0 822 144 24 0 chr5 52857474 52857599 -146772551 + AluJ SINE Alu 3 130 -172 6110 141 16 4 chr5 52857607 52858943 -146771207 + L1PB3 LINE L1 4799 6149 -5 1132 167 6 0 chr5 52858944 52859124 -146771026 + AluJ SINE Alu 121 301 -11 438 65 0 0 chr5 52859682 52859744 -146770406 + (TAGA)n Simple_repeat Simple_repeat 3 64 0 2290 200 56 56 chr5 52860804 52861433 -146768717 - L1ME1 LINE L1 -4 6162 5534 770 152 46 0 chr5 52862043 52862194 -146767956 - L1ME1 LINE L1 -999 5147 4990 787 312 129 28 chr5 52862301 52862943 -146767207 - L1MEc LINE L1 -3414 2801 2133 200 188 0 0 chr5 52863330 52863362 -146766788 + (TG)n Simple_repeat Simple_repeat 1 32 0 309 311 49 30 chr5 52863402 52863566 -146766584 - HAL1 LINE L1 -1106 1401 1235 189 0 0 0 chr5 52864435 52864456 -146765694 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 2214 100 0 0 chr5 52865453 52865762 -146764388 + AluSc SINE Alu 1 309 0 348 111 0 0 chr5 52866293 52866347 -146763803 + (CA)n Simple_repeat Simple_repeat 1 54 0 859 239 68 21 chr5 52866829 52867063 -146763087 + MIR SINE MIR 2 246 -16 208 265 59 49 chr5 52867596 52867698 -146762452 + MIR SINE MIR 156 258 -4 2264 96 0 3 chr5 52868023 52868326 -146761824 - AluY SINE Alu -9 302 1 240 35 0 0 chr5 52869839 52869868 -146760282 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2461 79 0 19 chr5 52869876 52870194 -146759956 + AluSx SINE Alu 1 312 0 367 314 107 0 chr5 52870354 52870475 -146759675 - MIR3 SINE MIR -17 191 58 629 299 23 0 chr5 52870750 52870927 -146759223 - MER63A DNA MER1_type 0 210 30 580 189 53 53 chr5 52871084 52871216 -146758934 - FLAM_A SINE Alu 0 133 2 263 298 75 0 chr5 52871271 52871365 -146758785 - MIR SINE MIR -14 248 148 1791 200 39 58 chr5 52871672 52872136 -146758014 - LTR16A1 LTR ERVL -2 455 1 857 204 122 16 chr5 52872215 52872460 -146757690 + MER63 DNA MER1_type 12 282 -779 559 260 0 40 chr5 52872461 52872611 -146757539 - MIR SINE MIR -47 215 72 2104 126 10 3 chr5 52874317 52874618 -146755532 - AluSx SINE Alu -5 307 5 390 228 40 40 chr5 52874923 52875024 -146755126 - L2 LINE L2 0 3272 3172 585 260 27 7 chr5 52875452 52875602 -146754548 + MIR SINE MIR 81 233 -29 227 299 112 19 chr5 52878605 52878712 -146751438 + MIR3 SINE MIR 5 121 -87 204 250 0 19 chr5 52879408 52879460 -146750690 - L2 LINE L2 -1 3312 3262 282 56 0 0 chr5 52879495 52879531 -146750619 + (CA)n Simple_repeat Simple_repeat 2 37 0 1135 167 116 6 chr5 52879690 52880001 -146750149 + Charlie1 DNA MER1_type 2263 2607 -154 184 354 37 0 chr5 52880575 52880657 -146749493 + L2 LINE L2 2560 2644 -670 642 261 129 23 chr5 52880714 52880978 -146749172 + MSTD LTR MaLR 66 357 -39 292 337 77 86 chr5 52881046 52881620 -146748530 + L2 LINE L2 2702 3272 0 555 284 138 30 chr5 52883212 52883444 -146746706 + MIR SINE MIR 6 262 0 21 0 0 0 chr5 52884219 52884240 -146745910 + AT_rich Low_complexity Low_complexity 1 21 0 321 262 60 0 chr5 52884430 52884514 -146745636 + L2 LINE L2 3184 3272 0 2347 87 6 3 chr5 52884619 52884930 -146745220 - AluSq SINE Alu -1 312 1 22 35 0 0 chr5 52885344 52885373 -146744777 + AT_rich Low_complexity Low_complexity 1 29 0 234 0 0 0 chr5 52887034 52887060 -146743090 + (CA)n Simple_repeat Simple_repeat 2 27 0 186 43 0 0 chr5 52887060 52887083 -146743067 + (CCA)n Simple_repeat Simple_repeat 1 23 0 33 56 0 0 chr5 52888639 52888693 -146741457 + AT_rich Low_complexity Low_complexity 1 54 0 205 320 68 19 chr5 52889677 52889780 -146740370 + L2 LINE L2 3146 3253 -19 370 248 50 10 chr5 52889782 52889883 -146740267 - L2 LINE L2 -5 3308 3204 40 67 0 0 chr5 52890848 52890923 -146739227 + AT_rich Low_complexity Low_complexity 1 75 0 188 384 14 43 chr5 52890992 52891130 -146739020 + MIR SINE MIR 75 208 -54 222 250 113 12 chr5 52891276 52891356 -146738794 + L2 LINE L2 3225 3312 -1 180 0 0 0 chr5 52891385 52891405 -146738745 + (CATTT)n Simple_repeat Simple_repeat 1 20 0 2069 125 14 0 chr5 52891405 52891694 -146738456 - AluSx SINE Alu -19 293 1 1558 112 5 14 chr5 52892062 52892285 -146737865 + AluSc SINE Alu 44 264 -45 4050 212 30 25 chr5 52893002 52893721 -146736429 - L1MB3 LINE L1 0 6183 5469 1295 190 99 32 chr5 52893721 52894063 -146736087 + MLT1A1 LTR MaLR 1 365 0 4050 212 30 25 chr5 52894063 52894092 -146736058 - L1MB3 LINE L1 -714 5469 5442 2214 124 3 7 chr5 52894092 52894391 -146735759 - AluSx SINE Alu -14 298 1 4050 212 30 25 chr5 52894391 52895519 -146734631 - L1MB3 LINE L1 -741 5442 4302 275 177 0 16 chr5 52895515 52895577 -146734573 + L1 LINE L1 4207 4267 -1879 * 260 326 227 0 chr5 52898734 52898875 -146731275 - MIR SINE MIR -1 261 89 399 321 39 72 chr5 52899045 52899350 -146730800 - L2 LINE L2 -92 3180 2886 24 0 0 0 chr5 52899387 52899411 -146730739 + AT_rich Low_complexity Low_complexity 1 24 0 249 370 152 21 chr5 52899487 52899730 -146730420 - L2 LINE L2 -474 2840 2566 1276 124 21 0 chr5 52900073 52900259 -146729891 - AluJo SINE Alu -2 310 121 5774 11 0 0 chr5 52900277 52900923 -146729227 - L1PA2 LINE L1 -1 6154 5509 * 14347 26 5 0 chr5 52900922 52903389 -146726761 + L1PA3 LINE L1 3685 6155 0 203 133 0 50 chr5 52903393 52903453 -146726697 + (A)n Simple_repeat Simple_repeat 1 57 0 2423 144 69 2 chr5 52904444 52904894 -146725256 + MER31A LTR ERV1 6 485 0 1927 181 88 25 chr5 52905287 52905762 -146724388 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr5 52906662 52906683 -146723467 + AT_rich Low_complexity Low_complexity 1 21 0 182 188 0 0 chr5 52907104 52907136 -146723014 + L2 LINE L2 2600 2631 -683 1808 242 67 30 chr5 52907144 52908060 -146722090 + L2 LINE L2 2363 3312 -1 685 264 98 0 chr5 52908851 52909025 -146721125 - MIR SINE MIR 0 262 72 237 290 70 10 chr5 52909989 52910089 -146720061 - MER5A DNA MER1_type -5 184 79 * 310 276 38 19 chr5 52910004 52910093 -146720057 + MER5A DNA MER1_type 35 128 -61 2151 133 0 0 chr5 52910093 52910402 -146719748 - AluY SINE Alu -2 309 1 310 276 38 19 chr5 52910402 52910417 -146719733 + MER5A DNA MER1_type 128 141 -48 331 247 132 32 chr5 52910481 52910671 -146719479 - Charlie2 DNA MER1_type -56 2806 2598 7638 41 2 0 chr5 52910671 52911667 -146718483 - L1P LINE L1 -4188 1958 961 4627 35 0 0 chr5 52911654 52912263 -146717887 + L1PA3 LINE L1 5564 6172 0 * 1755 209 111 28 chr5 52912263 52912644 -146717506 - Charlie2 DNA MER1_type -257 2605 2257 2208 96 0 16 chr5 52912644 52912956 -146717194 - AluSg SINE Alu -3 307 1 1755 209 111 28 chr5 52912956 52913266 -146716884 - Charlie2 DNA MER1_type -605 2257 1856 513 247 51 32 chr5 52913257 52913415 -146716735 - Charlie2 DNA MER1_type -2532 330 170 * 566 199 46 8 chr5 52913547 52913678 -146716472 - L2 LINE L2 0 3313 3178 2403 198 12 16 chr5 52913771 52914272 -146715878 + MLT2B3 LTR ERVL 10 508 -46 1389 169 48 24 chr5 52914292 52914587 -146715563 + MER2 DNA MER2_type 1 302 -43 345 223 86 42 chr5 52914687 52914920 -146715230 - L1MEc LINE L1 -840 1736 1496 290 270 0 0 chr5 52914959 52915033 -146715117 + (TATG)n Simple_repeat Simple_repeat 2 75 0 1327 242 42 22 chr5 52915033 52915405 -146714745 - MLT2D LTR ERVL -40 480 1 411 256 30 60 chr5 52915405 52915466 -146714684 - L1MEc LINE L1 -4818 1397 1336 1514 190 46 39 chr5 52915466 52915650 -146714500 - AluJo SINE Alu -5 307 119 180 0 0 0 chr5 52915650 52915670 -146714480 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1514 190 46 39 chr5 52915670 52915790 -146714360 - AluJo SINE Alu -193 119 1 411 256 30 60 chr5 52915790 52915994 -146714156 - L1MEc LINE L1 -4879 1336 1140 2378 272 72 22 chr5 52916001 52916892 -146713258 - L1MEc LINE L1 -5426 970 36 201 296 53 53 chr5 52917106 52917258 -146712892 + L2 LINE L2 1806 1957 -1357 470 237 44 9 chr5 52917355 52917469 -146712681 + L2 LINE L2 3195 3312 -1 215 301 72 0 chr5 52917603 52917686 -146712464 + L2 LINE L2 2312 2400 -914 214 317 72 106 chr5 52918887 52919152 -146710998 - L2 LINE L2 0 3272 3017 368 237 123 0 chr5 52919240 52919354 -146710796 + MER46C DNA MER2_type 1 128 -210 399 356 107 34 chr5 52919384 52919917 -146710233 + L2 LINE L2 2403 2974 -340 233 250 58 0 chr5 52920117 52920169 -146709981 + L2 LINE L2 3235 3289 -24 874 166 131 30 chr5 52920371 52920570 -146709580 - MER20 DNA MER1_type 0 219 1 2001 217 54 75 chr5 52921323 52922083 -146708067 + L1MC4 LINE L1 7299 8042 0 1546 150 0 16 chr5 52922256 52922502 -146707648 + AluSq SINE Alu 72 313 0 407 308 148 33 chr5 52922802 52923488 -146706662 + L2 LINE L2 2456 3272 0 2359 113 0 0 chr5 52924613 52924923 -146705227 - AluSp SINE Alu -3 310 1 1879 166 10 0 chr5 52924933 52925240 -146704910 - AluSx SINE Alu -2 310 1 216 239 31 113 chr5 52925240 52925392 -146704758 + L2 LINE L2 2153 2293 -1021 216 363 121 8 chr5 52927097 52927221 -146702929 + L2 LINE L2 2962 3099 -173 469 207 238 12 chr5 52928260 52928424 -146701726 - MIR SINE MIR -49 213 13 185 318 30 0 chr5 52928435 52928501 -146701649 + L3 LINE CR1 1250 1317 -260 * 284 272 68 87 chr5 52928494 52928597 -146701553 - MIR SINE MIR -86 122 22 2223 118 7 0 chr5 52929022 52929328 -146700822 + AluSx SINE Alu 1 308 -4 772 202 0 0 chr5 52930936 52931065 -146699085 + FLAM_C SINE Alu 1 129 -4 2271 25 0 0 chr5 52931067 52931413 -146698737 - L1P1 LINE L1 -635 5520 5175 980 296 35 49 chr5 52931744 52932196 -146697954 - MLT1K LTR MaLR -100 488 43 234 91 0 0 chr5 52932345 52932378 -146697772 + (TG)n Simple_repeat Simple_repeat 2 34 0 1077 164 94 20 chr5 52933566 52933767 -146696383 - MER46A DNA MER2_type -4 232 17 231 239 0 0 chr5 52933886 52933932 -146696218 - L2 LINE L2 -39 3233 3188 21 57 0 0 chr5 52934172 52934207 -146695943 + AT_rich Low_complexity Low_complexity 1 35 0 2703 30 0 0 chr5 52934286 52934587 -146695563 - AluY SINE Alu -10 301 1 1189 282 115 10 chr5 52934622 52935040 -146695110 - MLT1J LTR MaLR -49 462 1 243 266 120 82 chr5 52935463 52935621 -146694529 + MIR SINE MIR 29 192 -70 26 30 0 0 chr5 52936490 52936523 -146693627 + AT_rich Low_complexity Low_complexity 1 33 0 2796 94 0 27 chr5 52937138 52937512 -146692638 - THE1B LTR MaLR 0 364 1 474 258 148 0 chr5 52937550 52937678 -146692472 - MLT1J LTR MaLR -320 191 45 372 22 0 0 chr5 52938091 52938136 -146692014 + (TG)n Simple_repeat Simple_repeat 2 46 0 1783 131 76 0 chr5 52938766 52939041 -146691109 + AluJb SINE Alu 1 296 -16 186 133 0 0 chr5 52939102 52939132 -146691018 + L2 LINE L2 2698 2727 -587 23 54 0 0 chr5 52939638 52939675 -146690475 + AT_rich Low_complexity Low_complexity 1 37 0 594 158 73 0 chr5 52940093 52940225 -146689925 - Charlie1 DNA MER1_type -9 2752 2606 583 150 126 36 chr5 52940225 52940245 -146689905 + AluSc SINE Alu 118 135 -174 674 156 57 0 chr5 52940245 52940367 -146689783 + FLAM_C SINE Alu 1 129 -4 583 150 126 36 chr5 52940367 52940513 -146689637 + AluSc SINE Alu 135 299 -10 4824 171 168 2 chr5 52940513 52941622 -146688528 - Charlie1 DNA MER1_type -172 2589 1 334 290 15 46 chr5 52942139 52942270 -146687880 - L2 LINE L2 -7 3306 3180 1417 190 67 53 chr5 52942561 52942935 -146687215 + MLT1B LTR MaLR 4 382 -8 258 315 171 45 chr5 52942965 52943451 -146686699 - L2 LINE L2 -509 2805 2259 183 204 0 0 chr5 52943456 52943500 -146686650 + GA-rich Low_complexity Low_complexity 1 44 0 220 250 28 42 chr5 52943541 52943613 -146686537 + MIR SINE MIR 81 151 -111 191 88 29 0 chr5 52944102 52944136 -146686014 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 2174 90 17 0 chr5 52944138 52944427 -146685723 - AluSg SINE Alu -2 308 15 282 315 129 6 chr5 52946952 52947130 -146683020 + MIR SINE MIR 12 211 -51 2357 110 41 39 chr5 52947368 52947731 -146682419 - THE1B LTR MaLR 0 364 1 441 329 114 14 chr5 52949343 52949562 -146680588 - MIR SINE MIR -10 252 12 23 54 0 0 chr5 52951263 52951300 -146678850 + AT_rich Low_complexity Low_complexity 1 37 0 1637 125 16 16 chr5 52951436 52951692 -146678458 + AluSg SINE Alu 46 301 -9 417 39 0 0 chr5 52952641 52952692 -146677458 + (TG)n Simple_repeat Simple_repeat 2 52 0 227 226 19 0 chr5 52952903 52952956 -146677194 + (TATG)n Simple_repeat Simple_repeat 2 55 0 257 266 0 16 chr5 52957224 52957288 -146672862 + (TG)n Simple_repeat Simple_repeat 1 63 0 1475 166 38 35 chr5 52958176 52958466 -146671684 - AluJb SINE Alu -21 291 1 6173 196 58 31 chr5 52959171 52960740 -146669410 - L1 LINE L1 -1694 4452 2841 1112 165 10 5 chr5 52960745 52960939 -146669211 - MER46B DNA MER2_type -166 70 1 256 200 0 80 chr5 52960941 52961016 -146669134 - L1ME LINE L1 -570 5551 5483 258 229 0 0 chr5 52961844 52961892 -146668258 - L2 LINE L2 -20 3293 3246 1909 152 7 0 chr5 52962623 52962919 -146667231 + AluJb SINE Alu 1 298 -14 927 220 106 59 chr5 52963192 52963488 -146666662 + LTR56 LTR ERV1 22 344 -101 1885 145 10 10 chr5 52963488 52963792 -146666358 + AluJb SINE Alu 1 304 -8 927 220 106 59 chr5 52963792 52963900 -146666250 + LTR56 LTR ERV1 344 445 0 791 206 40 23 chr5 52964549 52964724 -146665426 - MER5B DNA MER1_type 0 178 1 228 296 170 30 chr5 52964781 52964916 -146665234 - MER5A DNA MER1_type 0 189 25 2578 151 39 10 chr5 52966146 52966562 -146663588 + MSTA LTR MaLR 1 428 0 932 158 0 0 chr5 52967586 52967719 -146662431 - FLAM_C SINE Alu 0 133 1 864 236 114 67 chr5 52967899 52968401 -146661749 - L2 LINE L2 -4 3309 2758 451 205 24 63 chr5 52968404 52968531 -146661619 - MLT1A2 LTR MaLR -252 122 1 28 29 0 0 chr5 52968766 52968801 -146661349 + AT_rich Low_complexity Low_complexity 1 35 0 632 155 77 52 chr5 52969669 52969801 -146660349 - MER106B DNA MER1_type -1 1058 920 447 19 0 0 chr5 52969801 52969853 -146660297 + (TG)n Simple_repeat Simple_repeat 1 52 0 632 155 77 52 chr5 52969853 52969875 -146660275 - MER106B DNA MER1_type -139 920 900 393 330 68 40 chr5 52969941 52970295 -146659855 - L2 LINE L2 -721 2593 2230 273 277 34 113 chr5 52970726 52970760 -146659390 - MIR3 SINE MIR -23 185 150 2153 125 3 0 chr5 52970760 52971055 -146659095 + AluSq SINE Alu 1 296 -17 273 277 34 113 chr5 52971055 52971197 -146658953 - MIR3 SINE MIR -58 150 23 44 46 0 0 chr5 52971712 52971777 -146658373 + AT_rich Low_complexity Low_complexity 1 65 0 890 209 107 0 chr5 53072064 53072251 -146557899 - MER20 DNA MER1_type -11 208 2 885 168 8 0 chr5 53072393 53072524 -146557626 + FLAM_C SINE Alu 2 133 0 1400 255 43 50 chr5 53072692 53073108 -146557042 - MLT1K LTR MaLR 0 588 176 1683 244 44 62 chr5 53073122 53073668 -146556482 + MLT1F LTR MaLR 6 541 -1 429 278 102 11 chr5 53075956 53076143 -146554007 + MIR SINE MIR 37 240 -22 224 123 55 0 chr5 53076191 53076264 -146553886 + (TA)n Simple_repeat Simple_repeat 1 77 0 2111 128 0 10 chr5 53076335 53076631 -146553519 - AluJb SINE Alu -19 293 1 1507 178 120 11 chr5 53077825 53078174 -146551976 + MLT1B LTR MaLR 1 387 -3 458 305 71 18 chr5 53078288 53078514 -146551636 + LTR33 LTR ERVL 56 293 -228 1255 204 108 88 chr5 53078761 53079217 -146550933 + MER4C LTR ERV1 1 465 0 2016 146 0 3 chr5 53079331 53079619 -146550531 - AluJo SINE Alu -25 287 1 234 293 165 0 chr5 53080241 53080374 -146549776 - MIR SINE MIR -43 219 65 2510 121 19 8 chr5 53080485 53080856 -146549294 - THE1C LTR MaLR 0 375 1 755 127 0 45 chr5 53080989 53081123 -146549027 + FLAM_C SINE Alu 5 132 -1 180 0 0 0 chr5 53081548 53081568 -146548582 + (TTCTG)n Simple_repeat Simple_repeat 1 20 0 2083 119 17 3 chr5 53082062 53082357 -146547793 - AluSx SINE Alu -13 299 1 248 186 0 34 chr5 53082357 53082416 -146547734 + HsTC2 DNA Tc2 19 75 -1823 499 222 42 48 chr5 53083827 53084016 -146546134 + MIR SINE MIR 69 256 -6 1465 171 19 41 chr5 53084055 53084324 -146545826 - AluJb SINE Alu -49 263 1 2330 81 13 3 chr5 53084857 53085155 -146544995 + AluSp SINE Alu 5 305 -8 1641 178 84 47 chr5 53085257 53085639 -146544511 + MSTD LTR MaLR 1 396 0 2208 107 0 19 chr5 53086286 53086594 -146543556 + AluSg SINE Alu 1 302 -8 1529 171 0 19 chr5 53086727 53086985 -146543165 + AluJo SINE Alu 60 312 0 2887 102 2 57 chr5 53088641 53089094 -146541056 - MSTA LTR MaLR 0 428 1 488 189 11 0 chr5 53089267 53089357 -146540793 + FLAM_C SINE Alu 37 127 -16 182 118 29 0 chr5 53089361 53089395 -146540755 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 1103 183 10 10 chr5 53089542 53089744 -146540406 - MER3 DNA MER1_type 0 209 8 874 144 0 0 chr5 53090313 53090431 -146539719 + FLAM_C SINE Alu 1 118 -25 5004 167 46 42 chr5 53090435 53090889 -146539261 + L1MD2 LINE L1 5267 5718 -641 1888 142 7 3 chr5 53090889 53091198 -146538952 - AluSx SINE Alu 0 310 1 5004 167 46 42 chr5 53091198 53091338 -146538812 + L1MD2 LINE L1 5718 5856 -503 1843 202 62 15 chr5 53091338 53091739 -146538411 - LTR52 LTR ERVL 0 421 2 5004 167 46 42 chr5 53091739 53092230 -146537920 + L1MD2 LINE L1 5856 6358 -1 1797 166 0 14 chr5 53092889 53093184 -146536966 + AluJo SINE Alu 5 295 -17 415 114 57 0 chr5 53093203 53093291 -146536859 + Charlie5 DNA MER1_type 2397 2489 -123 387 268 72 84 chr5 53093642 53093999 -146536151 + L2 LINE L2 2717 3070 -243 3164 165 25 8 chr5 53094051 53094644 -146535506 - L1MB4 LINE L1 -3 6177 5575 360 153 9 0 chr5 53094646 53094708 -146535442 - L1MC/D LINE L1 -553 5627 5562 562 281 0 0 chr5 53094723 53094858 -146535292 + L2 LINE L2 3179 3313 0 195 243 159 47 chr5 53094907 53095014 -146535136 + L2 LINE L2 3182 3300 -13 759 200 12 36 chr5 53095432 53095597 -146534553 + FRAM SINE Alu 1 153 -23 180 0 0 0 chr5 53095597 53095617 -146534533 + (TA)n Simple_repeat Simple_repeat 2 21 0 1460 111 35 4 chr5 53095843 53096069 -146534081 + MER50 LTR ERV1 2 234 -500 * 1479 179 16 39 chr5 53096057 53096365 -146533785 + MER50 LTR ERV1 433 733 -1 600 219 140 30 chr5 53097562 53097726 -146532424 + MER63B DNA MER1_type 1 182 -254 303 174 22 11 chr5 53097726 53097818 -146532332 + (TGGA)n Simple_repeat Simple_repeat 4 96 0 6480 91 12 5 chr5 53097839 53099626 -146530524 - L1PA10 LINE L1 -1 6167 4383 471 171 0 0 chr5 53099627 53099703 -146530447 + L1P LINE L1 3607 3682 -2464 * 13587 135 19 8 chr5 53099702 53101903 -146528247 - L1PA10 LINE L1 -1740 4406 2180 288 290 34 38 chr5 53102101 53102237 -146527913 - MIR SINE MIR -71 137 30 979 221 114 32 chr5 53102878 53103159 -146526991 + MLT1C LTR MaLR 164 467 0 4228 112 56 30 chr5 53103174 53103320 -146526830 + L1PA16 LINE L1 5462 5603 -563 2328 101 0 3 chr5 53103320 53103617 -146526533 + AluSg SINE Alu 1 296 -14 4228 112 56 30 chr5 53103617 53104148 -146526002 + L1PA16 LINE L1 5603 6157 -9 1853 179 16 3 chr5 53104163 53104481 -146525669 - MER68 LTR ERV1 -240 322 1 1455 218 81 0 chr5 53104482 53104817 -146525333 - L1ME1 LINE L1 -48 6118 5757 2489 216 41 19 chr5 53104830 53105464 -146524686 - L1ME1 LINE L1 -1007 5139 4492 2270 113 0 0 chr5 53105754 53106047 -146524103 + AluSx SINE Alu 1 293 -19 556 192 50 35 chr5 53106890 53107069 -146523081 - MLT1I LTR MaLR 0 409 266 292 214 18 0 chr5 53107140 53107196 -146522954 - MLT1I LTR MaLR -290 119 63 1747 159 0 37 chr5 53107364 53107698 -146522452 + AluJo SINE Alu 1 323 0 205 339 161 0 chr5 53107926 53108056 -146522094 - L2 LINE L2 0 3272 3122 1288 184 145 4 chr5 53108763 53109018 -146521132 + AluJo SINE Alu 1 291 -11 884 267 135 51 chr5 53109823 53109907 -146520243 - MLT1J LTR MaLR -45 466 390 2016 211 144 16 chr5 53109907 53110227 -146519923 + MER119 DNA MER1_type 5 282 -301 2496 87 0 0 chr5 53110227 53110536 -146519614 + AluY SINE Alu 1 309 -2 2016 211 144 16 chr5 53110536 53110728 -146519422 + MER119 DNA MER1_type 282 583 0 884 267 135 51 chr5 53110728 53111073 -146519077 - MLT1J LTR MaLR -121 390 1 1519 222 62 21 chr5 53112069 53112443 -146517707 + MSTD LTR MaLR 4 392 -4 2580 47 0 7 chr5 53112812 53113112 -146517038 - AluY SINE Alu -13 298 1 2017 168 0 0 chr5 53113520 53113824 -146516326 - AluJo SINE Alu -8 304 1 2037 133 13 3 chr5 53114488 53114788 -146515362 + AluSx SINE Alu 3 305 -7 547 314 49 0 chr5 53115131 53115316 -146514834 - MIR SINE MIR -54 208 15 771 147 8 16 chr5 53115558 53115687 -146514463 + FLAM_C SINE Alu 1 128 -5 1392 131 85 112 chr5 53116053 53116358 -146513792 - AluJo SINE Alu -15 297 1 303 104 0 0 chr5 53118676 53118724 -146511426 + (TC)n Simple_repeat Simple_repeat 2 49 0 192 77 0 0 chr5 53118725 53118751 -146511399 + (CA)n Simple_repeat Simple_repeat 2 27 0 1941 145 7 10 chr5 53119464 53119767 -146510383 - AluJb SINE Alu -10 302 1 364 213 115 36 chr5 53121202 53121324 -146508826 + MIR SINE MIR 14 145 -63 2214 91 3 0 chr5 53121724 53122057 -146508093 + AluSx SINE Alu 1 334 0 1045 221 188 33 chr5 53122504 53122706 -146507444 - MLT1G LTR MaLR -12 578 409 909 233 64 108 chr5 53122706 53123166 -146506984 - MER34 LTR ERV1 -4 538 106 2178 102 27 3 chr5 53123166 53123460 -146506690 + AluSg SINE Alu 2 302 -8 909 233 64 108 chr5 53123460 53123562 -146506588 - MER34 LTR ERV1 -436 106 1 1045 221 188 33 chr5 53123562 53123779 -146506371 - MLT1G LTR MaLR -181 409 94 583 262 18 24 chr5 53124216 53124384 -146505766 + MLT1J LTR MaLR 5 171 -340 1009 281 72 41 chr5 53124452 53124869 -146505281 + MLT1G1 LTR MaLR 163 592 -3 314 244 74 52 chr5 53124883 53125018 -146505132 + MLT1J LTR MaLR 374 511 0 1148 132 0 29 chr5 53125361 53125408 -146504742 + AluSg/x SINE Alu 135 182 -128 3326 124 97 2 chr5 53125408 53125914 -146504236 - MER41C LTR ERV1 0 554 1 1148 132 0 29 chr5 53125914 53126040 -146504110 + AluSg/x SINE Alu 182 303 -7 207 0 0 0 chr5 53126040 53126063 -146504087 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 315 0 0 0 chr5 53126062 53126097 -146504053 + (CA)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr5 53126133 53126157 -146503993 + AT_rich Low_complexity Low_complexity 1 24 0 342 271 219 56 chr5 53126519 53126807 -146503343 - MLT1J LTR MaLR -212 299 50 1841 223 33 24 chr5 53128390 53128847 -146501303 - MLT1C LTR MaLR -1 466 6 22 0 0 0 chr5 53128861 53128883 -146501267 + AT_rich Low_complexity Low_complexity 1 22 0 2347 228 51 19 chr5 53128891 53129457 -146500693 + MLT1G LTR MaLR 7 590 0 251 247 0 14 chr5 53129575 53129648 -146500502 + L1ME4a LINE L1 6049 6120 -1 2287 121 0 0 chr5 53129681 53129986 -146500164 + AluSx SINE Alu 1 305 -7 369 62 0 0 chr5 53131578 53131626 -146498524 + (CA)n Simple_repeat Simple_repeat 1 48 0 433 230 114 0 chr5 53131973 53132146 -146498004 + MLT1J LTR MaLR 16 175 -275 294 198 297 10 chr5 53132186 53132287 -146497863 + MLT1J1 LTR MaLR 288 417 -29 593 263 57 36 chr5 53132418 53132612 -146497538 - MIR SINE MIR -49 213 16 1732 171 4 0 chr5 53133237 53133512 -146496638 - AluJo SINE Alu -20 292 17 1897 207 60 62 chr5 53133554 53133920 -146496230 + MLT1D LTR MaLR 2 369 -136 2161 99 7 3 chr5 53133920 53134245 -146495905 - AluSx SINE Alu 0 326 1 1897 207 60 62 chr5 53134245 53134380 -146495770 + MLT1D LTR MaLR 369 503 -2 250 272 132 30 chr5 53134394 53134509 -146495641 + L1ME4a LINE L1 5706 5808 -313 1834 108 63 7 chr5 53134509 53134821 -146495329 - AluSq SINE Alu 0 327 1 250 272 132 30 chr5 53134821 53134939 -146495211 + L1ME4a LINE L1 5808 5964 -157 22 35 0 0 chr5 53134948 53134977 -146495173 + AT_rich Low_complexity Low_complexity 1 29 0 7990 126 34 2 chr5 53135189 53136383 -146493767 - Tigger3b DNA MER2_type 0 1231 1 237 324 40 35 chr5 53136588 53136761 -146493389 + MIR SINE MIR 89 262 0 1662 162 37 17 chr5 53137180 53137476 -146492674 + AluJb SINE Alu 1 302 -10 2238 95 7 0 chr5 53137479 53137775 -146492375 + AluSp SINE Alu 1 298 -15 5055 72 6 3 chr5 53138182 53138805 -146491345 - L1PA13 LINE L1 -8 6155 5531 5632 131 23 2 chr5 53138812 53139851 -146490299 - L1PA13 LINE L1 -719 5442 4383 365 260 268 0 chr5 53140649 53140776 -146489374 + MIR SINE MIR 28 188 -74 804 122 0 81 chr5 53140792 53140940 -146489210 + FLAM_C SINE Alu 7 142 -1 1488 151 48 34 chr5 53141025 53141316 -146488834 - L1MB2 LINE L1 0 6171 5877 1776 189 62 56 chr5 53142154 53142636 -146487514 + MLT1D LTR MaLR 21 505 0 366 226 50 0 chr5 53142642 53142740 -146487410 + L1M4 LINE L1 5691 5798 -348 1942 152 30 3 chr5 53142965 53143267 -146486883 - AluSx SINE Alu -2 310 1 750 209 0 8 chr5 53143311 53143445 -146486705 + FLAM_A SINE Alu 1 133 0 263 270 99 83 chr5 53143555 53143807 -146486343 - L2 LINE L2 -159 3113 2858 640 252 19 13 chr5 53144423 53144578 -146485572 - MER5B DNA MER1_type -20 158 3 943 255 173 39 chr5 53145477 53146158 -146483992 + L2 LINE L2 2557 3311 -2 344 257 156 0 chr5 53147112 53147221 -146482929 + MIR SINE MIR 18 143 -119 2259 84 0 3 chr5 53147935 53148222 -146481928 + AluSx SINE Alu 1 286 -26 232 254 108 39 chr5 53148259 53148389 -146481761 - L1MC4a LINE L1 -1870 5938 5800 282 245 102 10 chr5 53149644 53149683 -146480467 - MIR SINE MIR -72 190 156 1202 186 111 81 chr5 53149683 53150016 -146480134 - MER2 DNA MER2_type -1 343 1 282 245 102 10 chr5 53150016 53150074 -146480076 - MIR SINE MIR -106 156 84 347 293 122 27 chr5 53150166 53150354 -146479796 - MIR SINE MIR -49 213 8 423 266 107 24 chr5 53151375 53151544 -146478606 + MIR SINE MIR 2 184 -78 24 53 0 0 chr5 53154120 53154158 -146475992 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr5 53154441 53154463 -146475687 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 24 0 0 0 chr5 53157387 53157411 -146472739 + AT_rich Low_complexity Low_complexity 1 24 0 2431 93 0 0 chr5 53157488 53157800 -146472350 + AluSq SINE Alu 1 312 -1 1733 184 0 16 chr5 53158301 53158611 -146471539 + AluJb SINE Alu 1 305 -7 1210 86 0 0 chr5 53158781 53158995 -146471155 + AluSq SINE Alu 134 347 0 202 311 122 0 chr5 53159419 53159509 -146470641 - MIR SINE MIR -44 218 118 1009 132 57 13 chr5 53159634 53159793 -146470357 + FRAM SINE Alu 1 163 -13 828 142 0 0 chr5 53161657 53161777 -146468373 - AluJb SINE Alu -192 120 1 7029 52 2 0 chr5 53161777 53162591 -146467559 + L1PA5 LINE L1 5336 6151 -3 240 301 175 10 chr5 53163044 53163147 -146467003 - MIR3 SINE MIR -23 185 66 21 36 0 0 chr5 53163785 53163813 -146466337 + AT_rich Low_complexity Low_complexity 1 28 0 183 80 0 0 chr5 53164574 53164599 -146465551 + (A)n Simple_repeat Simple_repeat 1 25 0 347 268 126 38 chr5 53165090 53165273 -146464877 - MIR SINE MIR -21 241 43 204 40 0 0 chr5 53166493 53166518 -146463632 + (A)n Simple_repeat Simple_repeat 1 25 0 2418 84 7 3 chr5 53167776 53168084 -146462066 + AluSq SINE Alu 5 313 0 324 250 12 139 chr5 53168091 53168263 -146461887 + MIR SINE MIR 110 259 -3 341 233 58 0 chr5 53168404 53168490 -146461660 + MIR SINE MIR 54 144 -118 1637 232 79 7 chr5 53168523 53168954 -146461196 + MLT1C LTR MaLR 6 467 0 310 227 202 25 chr5 53169021 53169140 -146461010 - MIR SINE MIR -117 145 6 267 245 0 0 chr5 53169209 53169262 -146460888 + MIR SINE MIR 196 248 -14 653 167 54 42 chr5 53169304 53169514 -146460636 - MER58 DNA MER1_type 0 2420 3 261 290 103 45 chr5 53169823 53169978 -146460172 - MER5B DNA MER1_type 0 178 15 236 299 47 37 chr5 53169994 53170101 -146460049 + L2 LINE L2 2953 3060 -212 279 79 0 0 chr5 53170669 53170707 -146459443 + (TG)n Simple_repeat Simple_repeat 1 38 0 208 231 0 0 chr5 53171021 53171060 -146459090 - L2 LINE L2 -1 3271 3233 1358 234 81 64 chr5 53171301 53172210 -146457940 + L2 LINE L2 2398 3308 -5 2099 130 0 10 chr5 53172426 53172718 -146457432 + AluSx SINE Alu 1 289 -23 317 258 11 34 chr5 53173101 53173190 -146456960 - MIR SINE MIR -62 146 60 770 197 0 15 chr5 53173440 53173572 -146456578 - FLAM_A SINE Alu -2 131 2 21 0 0 0 chr5 53176339 53176360 -146453790 + AT_rich Low_complexity Low_complexity 1 21 0 378 198 79 30 chr5 53176414 53176515 -146453635 + MER3 DNA MER1_type 1 106 -103 295 188 0 0 chr5 53176473 53176521 -146453629 - Charlie5 DNA MER1_type -2526 86 39 * 893 121 0 8 chr5 53176964 53177088 -146453062 + FLAM_C SINE Alu 1 123 -20 1690 153 0 21 chr5 53177115 53177402 -146452748 - AluJo SINE Alu -18 294 14 262 323 80 35 chr5 53177708 53177909 -146452241 + L3 LINE CR1 792 1001 -576 301 336 9 0 chr5 53178153 53178260 -146451890 + L3 LINE CR1 1345 1452 -125 27 73 0 0 chr5 53180668 53180723 -146449427 + GC_rich Low_complexity Low_complexity 1 55 0 30 59 0 0 chr5 53181093 53181144 -146449006 + GC_rich Low_complexity Low_complexity 1 51 0 345 317 10 0 chr5 53181733 53181834 -146448316 + MIR SINE MIR 5 106 -156 207 125 0 0 chr5 53181882 53181914 -146448236 - MIR SINE MIR -115 147 116 21 36 0 0 chr5 53182135 53182163 -146447987 + AT_rich Low_complexity Low_complexity 1 28 0 361 312 61 5 chr5 53183277 53183480 -146446670 + L2 LINE L2 2791 3015 -298 264 76 28 19 chr5 53183637 53183744 -146446406 + (TA)n Simple_repeat Simple_repeat 1 108 0 317 223 21 32 chr5 53183744 53183838 -146446312 + L1MC4 LINE L1 6613 6705 -1337 433 106 56 12 chr5 53183838 53183998 -146446152 + (TA)n Simple_repeat Simple_repeat 1 167 0 2504 124 23 5 chr5 53184780 53185176 -146444974 + MER57B LTR ERV1 32 434 0 2133 110 31 3 chr5 53186430 53186722 -146443428 + AluSx SINE Alu 5 304 -8 236 209 118 59 chr5 53186898 53187085 -146443065 + L1M4 LINE L1 2115 2312 -3834 2162 118 3 22 chr5 53187782 53188096 -146442054 - AluSq SINE Alu -5 308 1 354 245 205 7 chr5 53188153 53188304 -146441846 + MIR SINE MIR 77 257 -5 1988 136 7 17 chr5 53188726 53189020 -146441130 + AluJb SINE Alu 1 291 -21 604 186 41 3 chr5 53189131 53189429 -146440721 + (TA)n Simple_repeat Simple_repeat 1 309 0 1998 130 0 14 chr5 53189491 53189810 -146440340 + AluSx SINE Alu 13 312 0 874 153 0 0 chr5 53189810 53189934 -146440216 + AluSq SINE Alu 134 257 -56 789 78 16 16 chr5 53189935 53190063 -146440087 + (GGAA)n Simple_repeat Simple_repeat 3 130 0 262 230 23 35 chr5 53190105 53190192 -146439958 + L2 LINE L2 3161 3246 -67 21 0 0 0 chr5 53190349 53190370 -146439780 + AT_rich Low_complexity Low_complexity 1 21 0 1747 141 57 3 chr5 53190480 53190777 -146439373 - MER34C LTR ERV1 -272 313 1 276 116 23 0 chr5 53190861 53190904 -146439246 - AluJ SINE Alu -69 233 190 2691 166 20 61 chr5 53190904 53191143 -146439007 + LTR60 LTR ERV1 1 248 -338 2185 113 17 0 chr5 53191143 53191435 -146438715 + AluSq SINE Alu 1 297 -16 2691 166 20 61 chr5 53191435 53191804 -146438346 + LTR60 LTR ERV1 248 584 -2 260 252 79 43 chr5 53191858 53191997 -146438153 + MER51D LTR ERV1 514 657 0 770 151 78 94 chr5 53191997 53192080 -146438070 - AluJ SINE Alu -119 193 110 2270 112 0 0 chr5 53192080 53192375 -146437775 + AluSx SINE Alu 1 295 -17 770 151 78 94 chr5 53192375 53192483 -146437667 - AluJ SINE Alu -202 110 5 5423 50 15 0 chr5 53193486 53194142 -146436008 - MER11C LTR ERVK -405 666 1 1631 104 120 35 chr5 53195160 53195458 -146434692 - AluY SINE Alu 0 320 1 1560 157 90 0 chr5 53195692 53195959 -146434191 + AluJb SINE Alu 14 304 -8 916 117 0 29 chr5 53196703 53196840 -146433310 - FLAM_C SINE Alu 0 133 1 814 154 8 0 chr5 53197319 53197442 -146432708 - FLAM_C SINE Alu -19 124 1 224 57 0 29 chr5 53197518 53197553 -146432597 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 5950 44 48 0 chr5 53197575 53198297 -146431853 - L1PA5 LINE L1 -5 6149 5393 * 10100 56 6 4 chr5 53198294 53199567 -146430583 + L1P LINE L1 3540 4815 -1331 749 147 62 0 chr5 53199722 53199851 -146430299 + AluJo SINE Alu 2 138 -174 3243 143 108 142 chr5 53199919 53200219 -146429931 - MER21A LTR ERV1 0 931 622 2084 143 0 0 chr5 53200219 53200526 -146429624 - AluSx SINE Alu -4 308 2 3243 143 108 142 chr5 53200526 53200788 -146429362 - MER21A LTR ERV1 -309 622 353 1883 138 7 10 chr5 53200788 53201077 -146429073 - AluJb SINE Alu -24 288 1 3243 143 108 142 chr5 53201077 53201443 -146428707 - MER21A LTR ERV1 -578 353 34 216 0 0 0 chr5 53201455 53201479 -146428671 + (TA)n Simple_repeat Simple_repeat 1 24 0 563 188 10 0 chr5 53201491 53201592 -146428558 - MLT1E LTR MaLR -452 141 40 740 244 43 0 chr5 53202875 53203078 -146427072 + MIR SINE MIR 20 228 -34 21 57 0 0 chr5 53203175 53203210 -146426940 + AT_rich Low_complexity Low_complexity 1 35 0 1630 171 18 11 chr5 53203512 53203786 -146426364 - AluJb SINE Alu -34 278 3 1560 87 10 0 chr5 53204643 53204849 -146425301 - MER57B LTR ERV1 -197 237 30 2425 100 0 3 chr5 53204849 53205159 -146424991 + AluSg SINE Alu 1 309 -1 331 93 0 0 chr5 53205190 53205233 -146424917 - MER57B LTR ERV1 -389 45 3 234 150 0 0 chr5 53205353 53205393 -146424757 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 497 216 111 76 chr5 53205517 53205688 -146424462 - MER102b DNA MER1_type -8 333 157 2150 125 10 0 chr5 53205691 53205986 -146424164 - AluSx SINE Alu -14 298 1 2372 82 3 0 chr5 53205990 53206293 -146423857 - AluY SINE Alu -7 304 1 1979 144 0 23 chr5 53206539 53206844 -146423306 + AluJb SINE Alu 7 304 -8 205 182 30 15 chr5 53207307 53207373 -146422777 + A-rich Low_complexity Low_complexity 2 68 0 34 55 0 0 chr5 53207390 53207445 -146422705 + AT_rich Low_complexity Low_complexity 1 55 0 27716 67 15 15 chr5 53207445 53208666 -146421484 - HERVK9 LTR ERVK -2345 3571 2351 1995 84 0 4 chr5 53208666 53208915 -146421235 + AluY SINE Alu 50 297 -14 27716 67 15 15 chr5 53208915 53210442 -146419708 - HERVK9 LTR ERVK -3565 2351 761 190 217 0 83 chr5 53210442 53210502 -146419648 - MER5B DNA MER1_type -69 109 55 27716 67 15 15 chr5 53210502 53211264 -146418886 - HERVK9 LTR ERVK -5154 762 1 3536 101 0 4 chr5 53211264 53211738 -146418412 - MER9 LTR ERVK 0 511 40 12474 118 31 51 chr5 53211754 53213939 -146416211 - HERVK9 LTR ERVK 0 5916 3776 1879 72 4 0 chr5 53214041 53214277 -146415873 + MER11B LTR ERVK 1000 1236 0 900 274 111 66 chr5 53215303 53215712 -146414438 + LTR33 LTR ERVL 2 438 -83 2159 129 7 0 chr5 53215712 53216021 -146414129 - AluSx SINE Alu -1 311 1 900 274 111 66 chr5 53216021 53216097 -146414053 + LTR33 LTR ERVL 438 509 -12 2216 212 31 13 chr5 53216221 53216678 -146413472 - LTR32 LTR ERVL 0 471 7 677 47 0 0 chr5 53217064 53217150 -146413000 + L1P LINE L1 5298 5383 -771 2781 163 82 2 chr5 53217711 53218213 -146411937 - MER34 LTR ERV1 0 542 1 887 182 18 0 chr5 53218232 53218402 -146411748 - L1MD1 LINE L1 -1 6241 6069 2363 90 3 3 chr5 53218606 53218906 -146411244 - AluSx SINE Alu -12 300 1 269 263 26 0 chr5 53218945 53219021 -146411129 + LTR33 LTR ERVL 20 97 -424 348 323 150 20 chr5 53219030 53219284 -146410866 + LTR33 LTR ERVL 235 521 0 800 288 4 18 chr5 53219586 53219814 -146410336 + LTR16A LTR ERVL 16 240 -210 830 199 128 12 chr5 53219814 53220066 -146410084 - MLT1F1 LTR MaLR -2 565 226 1740 94 130 32 chr5 53220191 53220468 -146409682 + AluSg SINE Alu 1 304 -6 2550 104 84 25 chr5 53221558 53221962 -146408188 - MSTA LTR MaLR 0 428 1 638 197 0 0 chr5 53222205 53222322 -146407828 - MER5B DNA MER1_type -1 177 61 446 330 60 0 chr5 53222347 53222532 -146407618 + L2 LINE L2 2599 2794 -520 221 286 122 61 chr5 53222660 53222758 -146407392 - L2 LINE L2 -1 3271 3168 2457 35 0 0 chr5 53222821 53223109 -146407041 + L1PA8 LINE L1 5561 5848 -324 2425 188 17 17 chr5 53223523 53223992 -146406158 + LTR32 LTR ERVL 3 471 0 203 29 88 0 chr5 53224087 53224121 -146406029 + T-rich Low_complexity Low_complexity 4 40 0 5242 49 5 2 chr5 53224121 53224755 -146405395 - L1PA5 LINE L1 -13 6141 5506 270 186 0 0 chr5 53225427 53225470 -146404680 + MER81 DNA DNA 1 43 -71 1397 184 13 57 chr5 53226835 53227150 -146403000 + L1MB7 LINE L1 5884 6184 0 1002 185 63 63 chr5 53227349 53227603 -146402547 + MLT1B LTR MaLR 1 254 -136 2294 122 0 0 chr5 53227621 53227932 -146402218 + AluSx SINE Alu 1 311 -1 249 286 0 0 chr5 53228121 53228184 -146401966 - MIR SINE MIR 0 262 200 544 241 18 0 chr5 53228188 53228300 -146401850 - MER81 DNA DNA 0 114 1 547 209 18 0 chr5 53228309 53228419 -146401731 - MIR SINE MIR -70 192 81 2071 133 3 0 chr5 53228423 53228723 -146401427 + AluSx SINE Alu 1 301 -11 2499 58 3 0 chr5 53228726 53229020 -146401130 + AluY SINE Alu 3 297 -14 832 298 68 25 chr5 53229112 53229508 -146400642 - LTR33 LTR ERVL 0 521 109 3876 130 14 24 chr5 53229737 53230312 -146399838 - MER61E LTR ERV1 0 569 1 411 269 99 72 chr5 53230763 53231248 -146398902 - MLT1H LTR MaLR -3 623 1 683 261 31 10 chr5 53331907 53332102 -146298048 + L3 LINE CR1 1350 1548 -29 5651 132 77 107 chr5 53332102 53333692 -146296458 + pTR5 LTR ERV1 741 2438 0 1133 296 42 9 chr5 53339826 53340160 -146289990 + LTR16A LTR ERVL 106 450 0 1038 242 42 36 chr5 53340293 53340623 -146289527 + HERV16 LTR ERVL 153 484 -4512 326 359 39 26 chr5 53340662 53340818 -146289332 + L2 LINE L2 3077 3234 -38 242 310 0 0 chr5 53340825 53340896 -146289254 + LTR16A1 LTR ERVL 1 71 -386 1038 195 19 5 chr5 53340995 53341205 -146288945 + LTR16A1 LTR ERVL 245 457 0 383 331 29 0 chr5 53341246 53341385 -146288765 - MIR3 SINE MIR -48 160 18 296 221 44 0 chr5 53342268 53342336 -146287814 - L2 LINE L2 -18 3295 3225 188 320 0 0 chr5 53342577 53342627 -146287523 - L2 LINE L2 -40 3232 3183 9293 39 2 1 chr5 53342788 53343858 -146286292 + MER11C LTR ERVK 1 1071 0 383 245 48 107 chr5 53343972 53344262 -146285888 + L2 LINE L2 3022 3294 -19 246 353 8 30 chr5 53344666 53344799 -146285351 - L2 LINE L2 -508 2806 2677 32 26 0 0 chr5 53344969 53345008 -146285142 + AT_rich Low_complexity Low_complexity 1 39 0 1135 105 0 7 chr5 53345175 53345328 -146284822 + AluSq/x SINE Alu 1 152 -160 25 0 0 0 chr5 53346301 53346326 -146283824 + AT_rich Low_complexity Low_complexity 1 25 0 244 194 0 69 chr5 53346331 53346403 -146283747 + L1ME2 LINE L1 5954 6020 -144 1675 136 9 88 chr5 53346403 53346742 -146283408 + AluJb SINE Alu 1 312 0 241 114 0 0 chr5 53346753 53346788 -146283362 + MER3 DNA MER1_type 15 49 -160 288 277 60 12 chr5 53347445 53347528 -146282622 - MER91C DNA MER1_type -21 119 33 2502 173 60 6 chr5 53347868 53348347 -146281803 - MLT1D LTR MaLR 0 505 1 222 319 0 0 chr5 53348381 53348450 -146281700 - L2 LINE L2 -19 3253 3185 347 217 0 66 chr5 53348536 53348642 -146281508 + Charlie8 DNA MER1_type 96 194 -2223 868 287 68 54 chr5 53348822 53349338 -146280812 + Charlie7 DNA MER1_type 67 589 -2023 260 193 243 29 chr5 53349865 53350005 -146280145 - MIR SINE MIR -6 256 87 21 36 0 0 chr5 53351336 53351364 -146278786 + GC_rich Low_complexity Low_complexity 1 28 0 333 221 179 0 chr5 53351783 53351878 -146278272 + L2 LINE L2 3157 3268 -4 272 295 142 67 chr5 53352528 53352887 -146277263 + MLT1K LTR MaLR 193 578 -10 748 264 106 24 chr5 53353044 53353290 -146276860 + LTR16C LTR ERVL 71 336 -155 376 166 153 98 chr5 53353400 53353563 -146276587 + MIR SINE MIR 14 185 -77 401 324 50 45 chr5 53354447 53354669 -146275481 + MIR SINE MIR 15 237 -25 424 259 9 0 chr5 53354989 53355097 -146275053 + MIR3 SINE MIR 94 202 -6 204 320 65 39 chr5 53355642 53355795 -146274355 - L2 LINE L2 0 3272 3116 465 230 118 13 chr5 53358146 53358298 -146271852 + MIR SINE MIR 51 218 -44 6567 173 30 8 chr5 53359799 53361120 -146269030 + L1PA13 LINE L1 4162 5516 -647 180 0 0 0 chr5 53361120 53361140 -146269010 + (TAA)n Simple_repeat Simple_repeat 2 21 0 6567 173 30 8 chr5 53361140 53361803 -146268347 + L1PA13 LINE L1 5516 6163 0 343 194 0 0 chr5 53362065 53362127 -146268023 + MIR3 SINE MIR 137 198 -10 237 83 0 0 chr5 53362904 53362940 -146267210 + (TC)n Simple_repeat Simple_repeat 1 36 0 890 163 14 0 chr5 53362940 53363081 -146267069 - FRAM SINE Alu -6 170 28 1865 171 17 8 chr5 53363178 53363534 -146266616 - MER46B DNA MER2_type 0 236 3 509 227 126 0 chr5 53364265 53364384 -146265766 - MER94 DNA DNA 0 134 1 195 222 0 0 chr5 53364387 53364432 -146265718 + (CGTG)n Simple_repeat Simple_repeat 4 48 0 193 331 72 22 chr5 53364454 53364593 -146265557 - L2 LINE L2 -2107 1207 1062 241 208 142 47 chr5 53364685 53364791 -146265359 + L2 LINE L2 2760 2875 -439 199 246 158 0 chr5 53365311 53365368 -146264782 + L2 LINE L2 2903 2968 -345 270 299 13 0 chr5 53365375 53365452 -146264698 + Tigger5 DNA MER2_type 1 78 -2245 441 213 0 0 chr5 53365455 53365530 -146264620 - Tigger5 DNA MER2_type -6 2317 2243 343 147 0 196 chr5 53365521 53365623 -146264527 + Tigger5 DNA MER2_type 2242 2323 0 * 429 301 161 4 chr5 53365650 53365899 -146264251 + L2 LINE L2 3013 3300 -13 189 107 0 0 chr5 53365900 53365928 -146264222 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 1083 313 139 30 chr5 53366337 53367015 -146263135 + L2 LINE L2 1529 2344 -970 1634 165 18 75 chr5 53367015 53367402 -146262748 + MLT1A1 LTR MaLR 1 365 0 1083 313 139 30 chr5 53367402 53367687 -146262463 + L2 LINE L2 2344 2597 -717 257 278 28 0 chr5 53367694 53367766 -146262384 + L2 LINE L2 3239 3312 -1 477 171 43 134 chr5 53369632 53369796 -146260354 - L1MA9 LINE L1 -38 6274 6126 186 43 0 0 chr5 53370594 53370617 -146259533 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 298 266 133 9 chr5 53370882 53370995 -146259155 - MIR SINE MIR -7 255 129 1140 192 14 5 chr5 53371454 53371662 -146258488 + MER20 DNA MER1_type 10 219 0 23 0 0 0 chr5 53371984 53372007 -146258143 + AT_rich Low_complexity Low_complexity 1 23 0 1416 124 50 0 chr5 53374048 53374266 -146255884 + MER30 DNA MER1_type 1 229 -1 185 298 41 25 chr5 53375590 53375711 -146254439 - L2 LINE L2 -960 2354 2232 909 258 46 85 chr5 53375724 53376542 -146253608 + L2 LINE L2 2510 3310 -3 214 299 42 42 chr5 53377985 53378129 -146252021 - MIR SINE MIR -56 206 63 423 0 0 0 chr5 53378273 53378320 -146251830 + (TG)n Simple_repeat Simple_repeat 2 48 0 323 308 20 0 chr5 53378911 53379057 -146251093 + L2 LINE L2 3161 3309 -4 1188 238 81 57 chr5 53379325 53379795 -146250355 - MLT1H LTR MaLR -12 537 57 394 274 110 14 chr5 53380532 53380678 -146249472 + MIR SINE MIR 47 206 -56 189 217 43 0 chr5 53380811 53380857 -146249293 - MIR SINE MIR -29 233 186 772 285 20 0 chr5 53380870 53381070 -146249080 - MIR SINE MIR -55 207 4 272 221 10 106 chr5 53382682 53382786 -146247364 + MER94 DNA DNA 25 118 -16 3059 245 20 42 chr5 53383275 53384641 -146245509 - L1M4 LINE L1 -1535 4847 3558 1007 265 18 10 chr5 53384653 53385053 -146245097 - L1M4 LINE L1 -3062 3320 2918 6994 55 10 2 chr5 53385064 53386004 -146244146 + L1PA6 LINE L1 5237 6154 0 3576 133 14 7 chr5 53386053 53386624 -146243526 + L1PA7 LINE L1 10 584 -5877 25860 87 17 5 chr5 53386634 53391358 -146238792 + L1PA7 LINE L1 1685 6468 -1 1597 209 123 62 chr5 53391359 53392075 -146238075 - L1M4 LINE L1 -3456 2926 2255 212 0 36 0 chr5 53392075 53392103 -146238047 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1787 143 0 4 chr5 53392106 53392364 -146237786 - AluJb SINE Alu -29 283 27 1597 209 123 62 chr5 53392364 53392883 -146237267 - L1M4 LINE L1 -4128 2254 1594 321 68 0 0 chr5 53392884 53392928 -146237222 + (TTCC)n Simple_repeat Simple_repeat 3 46 0 227 260 31 21 chr5 53392930 53393026 -146237124 - L1M4 LINE L1 -4782 1602 1506 1012 259 30 60 chr5 53393032 53393368 -146236782 - MLT1A2 LTR MaLR 0 374 49 6949 209 25 33 chr5 53393387 53395163 -146234987 - L1M2 LINE L1 -4480 2165 4 243 212 129 0 chr5 53395177 53395262 -146234888 - LTR68 LTR ERV1 -637 103 8 321 172 0 0 chr5 53395682 53395746 -146234404 + (CA)n Simple_repeat Simple_repeat 2 65 0 274 116 0 0 chr5 53395746 53395789 -146234361 - L1P5 LINE L1 -363 5788 5746 729 266 83 96 chr5 53396476 53396612 -146233538 - LTR16C LTR ERVL -14 477 341 2030 145 3 0 chr5 53396612 53396909 -146233241 + AluSx SINE Alu 1 298 -14 729 266 83 96 chr5 53396909 53397253 -146232897 - LTR16C LTR ERVL -150 341 3 360 299 120 7 chr5 53397414 53397504 -146232646 - Charlie8 DNA MER1_type -114 216 138 279 0 0 0 chr5 53397504 53397535 -146232615 + (TG)n Simple_repeat Simple_repeat 2 32 0 360 299 120 7 chr5 53397535 53397635 -146232515 - Charlie8 DNA MER1_type -192 138 21 281 341 16 66 chr5 53397765 53397947 -146232203 - L2 LINE L2 -557 2757 2585 642 298 123 17 chr5 53398793 53399142 -146231008 + LTR16C LTR ERVL 98 483 -8 212 0 36 0 chr5 53399350 53399378 -146230772 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 200 185 25 37 chr5 53400997 53401078 -146229072 + CT-rich Low_complexity Low_complexity 4 83 0 740 219 4 79 chr5 53401235 53401463 -146228687 - L2 LINE L2 -9 3304 3094 * 1414 255 76 49 chr5 53401444 53401958 -146228192 - L2 LINE L2 -410 2904 2377 328 205 98 38 chr5 53401962 53402120 -146228030 + LTR50 LTR ERVL 10 157 -366 519 60 0 0 chr5 53402440 53402507 -146227643 + (TTG)n Simple_repeat Simple_repeat 2 68 0 1161 204 70 62 chr5 53402528 53402886 -146227264 - L2 LINE L2 -938 2376 2016 262 319 18 39 chr5 53402997 53403191 -146226959 + MIR SINE MIR 21 207 -55 293 353 25 0 chr5 53403268 53403390 -146226760 + MIR SINE MIR 33 157 -105 1944 157 12 54 chr5 53403838 53404245 -146225905 - MLT1B LTR MaLR 0 390 1 868 243 197 19 chr5 53405062 53405433 -146224717 - MLT1J2 LTR MaLR -13 437 1 327 270 8 63 chr5 53406215 53406341 -146223809 - MIR3 SINE MIR -4 204 86 420 282 23 109 chr5 53406398 53406431 -146223719 + MIR SINE MIR 25 59 -203 2608 33 0 3 chr5 53406431 53406735 -146223415 - AluY SINE Alu -8 303 1 420 282 23 109 chr5 53406735 53406921 -146223229 + MIR SINE MIR 59 225 -37 600 211 12 84 chr5 53407509 53407554 -146222596 + MER5B DNA MER1_type 8 55 -123 1905 149 30 0 chr5 53407554 53407575 -146222575 - AluJb SINE Alu -6 306 287 198 0 0 0 chr5 53407575 53407597 -146222553 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 1905 149 30 0 chr5 53407597 53407871 -146222279 - AluJb SINE Alu -25 287 2 600 211 12 84 chr5 53407871 53407991 -146222159 + MER5B DNA MER1_type 55 161 -17 2422 145 92 19 chr5 53408078 53408548 -146221602 - MLT1D LTR MaLR -1 504 1 2362 96 3 6 chr5 53409148 53409462 -146220688 - AluSq SINE Alu 0 313 1 362 184 0 12 chr5 53410542 53410688 -146219462 - MER3 DNA MER1_type 0 209 1 449 247 6 77 chr5 53411257 53411427 -146218723 + MIR SINE MIR 53 210 -52 533 204 315 0 chr5 53411829 53411991 -146218159 + AluJb SINE Alu 1 213 -99 545 291 145 28 chr5 53412028 53412310 -146217840 - L1MEc LINE L1 -4229 2167 1853 281 333 132 7 chr5 53412846 53412990 -146217160 + MIR SINE MIR 90 251 -11 403 95 27 0 chr5 53414600 53414674 -146215476 + (TC)n Simple_repeat Simple_repeat 1 76 0 5766 103 30 1 chr5 53414867 53415929 -146214221 + L1PA14 LINE L1 5073 6160 -1 321 233 17 33 chr5 53415979 53416020 -146214130 + (TA)n Simple_repeat Simple_repeat 2 42 -77 665 259 61 0 chr5 53416020 53416217 -146213933 - MER63A DNA MER1_type -1 209 1 321 233 17 33 chr5 53416217 53416252 -146213898 + (TA)n Simple_repeat Simple_repeat 42 76 -43 213 39 0 0 chr5 53416252 53416278 -146213872 + (TG)n Simple_repeat Simple_repeat 2 27 0 321 233 17 33 chr5 53416278 53416320 -146213830 + (TA)n Simple_repeat Simple_repeat 76 119 0 317 352 119 29 chr5 53416373 53416819 -146213331 - L2 LINE L2 -359 2955 2470 2081 104 31 0 chr5 53416888 53417175 -146212975 + AluSx SINE Alu 1 296 -16 582 346 88 48 chr5 53417350 53417949 -146212201 - L2 LINE L2 -2173 1141 519 1311 174 40 119 chr5 53419261 53419657 -146210493 - MLT1A1 LTR MaLR 0 365 1 509 233 55 86 chr5 53420604 53420930 -146209220 - HAL1 LINE L1 -825 1682 1367 2248 125 0 0 chr5 53421022 53421326 -146208824 - AluSc SINE Alu -3 306 3 2093 138 0 3 chr5 53421338 53421635 -146208515 - AluSx SINE Alu -16 296 1 263 247 84 39 chr5 53421709 53421863 -146208287 - L1MEc LINE L1 -5061 1144 984 2151 140 0 0 chr5 53422078 53422378 -146207772 - AluSx SINE Alu -12 300 1 231 133 0 22 chr5 53424719 53424764 -146205386 - MLT1L LTR MaLR -4 611 568 226 295 97 63 chr5 53425076 53425313 -146204837 - MLT1L LTR MaLR -364 251 7 355 330 102 33 chr5 53425384 53425687 -146204463 + L2 LINE L2 2223 2546 -768 371 320 221 9 chr5 53425935 53426251 -146203899 + L2 LINE L2 2890 3272 0 24 32 0 0 chr5 53426940 53426971 -146203179 + AT_rich Low_complexity Low_complexity 1 31 0 1308 253 67 28 chr5 53427280 53427671 -146202479 - LTR16A LTR ERVL -29 421 16 2762 151 42 30 chr5 53429285 53429828 -146200322 - MER21A LTR ERV1 -6 925 376 1135 141 84 4 chr5 53429833 53430060 -146200090 - MER21A LTR ERV1 -667 264 20 276 30 0 0 chr5 53430060 53430093 -146200057 + (TG)n Simple_repeat Simple_repeat 2 34 0 495 310 89 14 chr5 53430347 53430560 -146199590 - L2 LINE L2 -8 3305 3077 571 271 54 0 chr5 53430994 53431160 -146198990 - MIR3 SINE MIR -2 206 32 300 209 51 40 chr5 53431653 53431733 -146198417 + MLT1K LTR MaLR 456 532 -56 1702 155 82 23 chr5 53431733 53432087 -146198063 - THE1C LTR MaLR 0 375 1 300 209 51 40 chr5 53432087 53432130 -146198020 + MLT1K LTR MaLR 532 573 -15 887 241 41 9 chr5 53432372 53432592 -146197558 + MIR SINE MIR 36 262 0 2065 159 40 0 chr5 53433804 53434156 -146195994 - MER47A DNA MER2_type 0 366 1 2427 39 19 3 chr5 53434462 53434771 -146195379 - L1PA4 LINE L1 -1 6154 5841 354 268 0 68 chr5 53435088 53435278 -146194872 - L1MC4 LINE L1 -2 8040 7864 2695 140 55 45 chr5 53435761 53436338 -146193812 + MER34C LTR ERV1 1 583 -2 518 275 37 5 chr5 53436341 53436559 -146193591 + MARNA DNA Mariner 236 460 -126 204 318 54 68 chr5 53437971 53438119 -146192031 - MIR SINE MIR -112 150 5 994 122 12 12 chr5 53439296 53439468 -146190682 - L1MA4A LINE L1 -349 5954 5783 258 60 40 20 chr5 53439473 53439523 -146190627 + (TA)n Simple_repeat Simple_repeat 2 52 0 208 92 8 118 chr5 53439542 53439661 -146190489 + (TA)n Simple_repeat Simple_repeat 2 107 0 1711 85 0 41 chr5 53439661 53439932 -146190218 - L1MA4A LINE L1 -516 5787 5528 2153 137 25 18 chr5 53439932 53440326 -146189824 + L1MA4A LINE L1 5866 6262 -41 679 149 0 0 chr5 53440326 53440447 -146189703 + L1MA4A LINE L1 6180 6300 -3 234 281 35 57 chr5 53440825 53441053 -146189097 - L1ME LINE L1 -297 5824 5602 2058 146 3 0 chr5 53441054 53441348 -146188802 + AluSx SINE Alu 1 295 -17 30 27 0 0 chr5 53441406 53441443 -146188707 + AT_rich Low_complexity Low_complexity 1 37 0 258 300 25 12 chr5 53441501 53441581 -146188569 + MIR3 SINE MIR 101 181 -27 1594 189 18 31 chr5 53442229 53442515 -146187635 + AluJo SINE Alu 1 282 -30 850 175 138 6 chr5 53442662 53442822 -146187328 + MER5A DNA MER1_type 8 188 -1 497 206 11 17 chr5 53443336 53443516 -146186634 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 255 193 35 0 chr5 53443620 53443677 -146186473 + Charlie7 DNA MER1_type 47 105 -2507 * 334 147 136 110 chr5 53443646 53443837 -146186313 + Charlie7 DNA MER1_type 2415 2610 -2 186 291 89 0 chr5 53443996 53444075 -146186075 - MIR3 SINE MIR -109 99 14 29 0 0 0 chr5 53445791 53445820 -146184330 + AT_rich Low_complexity Low_complexity 1 29 0 755 218 34 63 chr5 53446878 53447084 -146183066 + L2 LINE L2 3114 3313 0 342 335 52 7 chr5 53447126 53447281 -146182869 + L3 LINE CR1 1274 1435 -142 262 294 39 0 chr5 53447283 53447385 -146182765 + U6 snRNA snRNA 1 106 -1 33 0 0 0 chr5 53448251 53448284 -146181866 + AT_rich Low_complexity Low_complexity 1 33 0 1155 142 46 0 chr5 53448287 53448506 -146181644 - L1MA7 LINE L1 -5 6286 6058 261 258 0 15 chr5 53450633 53450699 -146179451 + L2 LINE L2 3238 3302 -11 26 74 0 0 chr5 53451447 53451501 -146178649 + AT_rich Low_complexity Low_complexity 1 54 0 220 369 36 48 chr5 53452055 53452223 -146177927 - L3b LINE CR1 -3 1580 1415 333 302 95 0 chr5 53454082 53454198 -146175952 + MIR3 SINE MIR 50 176 -32 548 244 32 0 chr5 53454468 53454591 -146175559 - MIR SINE MIR -49 213 87 993 269 0 8 chr5 53454781 53455019 -146175131 - MIR SINE MIR 0 262 27 239 279 0 38 chr5 53456826 53456905 -146173245 + MIR SINE MIR 63 138 -70 276 318 110 29 chr5 53458905 53459078 -146171072 + MER5A DNA MER1_type 2 188 -1 1340 205 33 72 chr5 53459310 53459636 -146170514 + HsTC2 DNA Tc2 1283 1763 -135 3204 108 0 0 chr5 53459636 53459729 -146170421 + L1PB1 LINE L1 5689 5781 -370 1379 7 22 7 chr5 53459729 53460000 -146170150 + (TAGA)n Simple_repeat Simple_repeat 1 275 0 3204 108 0 0 chr5 53460000 53460367 -146169783 + L1PB1 LINE L1 5780 6150 -1 1340 205 33 72 chr5 53460367 53460499 -146169651 + HsTC2 DNA Tc2 1763 1899 1 192 158 0 0 chr5 53461320 53461358 -146168792 + (CA)n Simple_repeat Simple_repeat 2 39 0 216 97 0 0 chr5 53461365 53461396 -146168754 + (CAA)n Simple_repeat Simple_repeat 2 32 0 23 54 0 0 chr5 53461840 53461877 -146168273 + AT_rich Low_complexity Low_complexity 1 37 0 1527 225 11 11 chr5 53462015 53462366 -146167784 - MLT1A1 LTR MaLR -3 362 12 208 257 14 57 chr5 53462627 53462697 -146167453 + L2 LINE L2 3228 3294 -19 2128 119 0 7 chr5 53462867 53463160 -146166990 - AluSx SINE Alu -21 291 1 344 328 16 8 chr5 53463357 53463538 -146166612 + MIR SINE MIR 21 255 -7 533 252 134 39 chr5 53465327 53465633 -146164517 + LTR33 LTR ERVL 6 340 -181 1731 189 18 0 chr5 53465742 53466028 -146164122 + AluJb SINE Alu 1 291 -21 1982 147 33 25 chr5 53466442 53466803 -146163347 + THE1B LTR MaLR 1 364 0 20949 65 2 10 chr5 53466818 53470366 -146159784 + L1PA6 LINE L1 2608 6151 -3 180 0 0 0 chr5 53471103 53471123 -146159027 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 291 191 96 52 chr5 53472818 53472933 -146157217 + MLT1L LTR MaLR 148 267 -348 483 263 23 23 chr5 53473043 53473214 -146156936 + MLT1L LTR MaLR 445 615 0 763 187 8 15 chr5 53473790 53473924 -146156226 + FLAM_A SINE Alu 1 133 0 18055 191 29 27 chr5 53473927 53477960 -146152190 + L1M2a LINE L1 5 5119 -2465 207 0 0 0 chr5 53477960 53477983 -146152167 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 18055 191 29 27 chr5 53477983 53479232 -146150918 + L1M2a LINE L1 5119 6364 -1220 2854 99 35 0 chr5 53479230 53479663 -146150487 + L1PA12 LINE L1 5613 6060 -108 * 1443 151 7 28 chr5 53479664 53479949 -146150201 + L1P LINE L1 4526 4804 -1342 713 78 0 0 chr5 53479983 53480085 -146150065 - L1PA13 LINE L1 0 6163 6062 9244 107 4 3 chr5 53480133 53481500 -146148650 + L1PA5 LINE L1 11 1379 -4767 22983 50 4 0 chr5 53481508 53485623 -146144527 + L1PA5 LINE L1 2025 6149 -5 23 68 0 0 chr5 53485927 53485971 -146144179 + AT_rich Low_complexity Low_complexity 1 44 0 219 69 0 0 chr5 53486535 53486564 -146143586 + (TG)n Simple_repeat Simple_repeat 2 30 0 822 216 35 112 chr5 53488320 53488668 -146141482 - MER5C DNA MER1_type 0 324 4 210 342 143 35 chr5 53489331 53489481 -146140669 + MIR SINE MIR 3 164 -63 234 0 0 0 chr5 53489594 53489620 -146140530 + (CA)n Simple_repeat Simple_repeat 1 26 0 266 234 31 0 chr5 53490095 53490159 -146139991 + MIR SINE MIR 79 144 -118 31 76 0 0 chr5 53490231 53490297 -146139853 + AT_rich Low_complexity Low_complexity 1 66 0 1284 40 0 0 chr5 53491225 53491395 -146138755 + AluY SINE Alu 131 300 0 321 226 82 48 chr5 53492417 53492563 -146137587 + MIR SINE MIR 111 261 -1 241 161 16 32 chr5 53492871 53492933 -146137217 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 225 0 0 0 chr5 53493471 53493496 -146136654 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 603 319 60 17 chr5 53494273 53494508 -146135642 + MIR SINE MIR 8 252 -10 293 316 20 20 chr5 53494776 53494874 -146135276 + MIR3 SINE MIR 6 103 -105 228 333 46 28 chr5 53495021 53495129 -146135021 - MER5A DNA MER1_type -79 110 1 2123 124 0 13 chr5 53496226 53496541 -146133609 + AluSx SINE Alu 2 312 0 315 0 0 0 chr5 53496815 53496850 -146133300 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1129 190 80 51 chr5 53496854 53497128 -146133022 - AluJo SINE Alu -30 282 1 587 155 0 106 chr5 53497153 53497314 -146132836 + L1MB3 LINE L1 6039 6182 -1 1734 187 52 3 chr5 53499351 53499699 -146130451 - MLT1A1 LTR MaLR 0 365 1 2099 136 0 0 chr5 53499722 53500016 -146130134 + AluJb SINE Alu 1 294 -18 247 191 11 21 chr5 53500737 53500831 -146129319 + (CAGAGA)n Simple_repeat Simple_repeat 4 96 0 1122 193 4 4 chr5 53501557 53501795 -146128355 - L1MB1 LINE L1 0 6168 5931 2383 74 7 3 chr5 53502245 53502555 -146127595 + AluY SINE Alu 1 311 0 345 308 47 47 chr5 53502594 53502763 -146127387 + MER5A DNA MER1_type 21 189 0 21 0 0 0 chr5 53503241 53503262 -146126888 + AT_rich Low_complexity Low_complexity 1 21 0 1495 219 16 29 chr5 53504319 53504698 -146125452 + MLT1A2 LTR MaLR 1 374 0 629 257 106 80 chr5 53505387 53505726 -146124424 + MLT1J LTR MaLR 156 503 -8 2293 68 0 0 chr5 53506119 53506397 -146123753 - AluY SINE Alu -33 278 1 292 288 117 9 chr5 53506746 53506857 -146123293 - L2 LINE L2 0 3272 3150 2206 121 0 0 chr5 53507374 53507671 -146122479 + AluSx SINE Alu 2 298 -14 703 72 31 0 chr5 53508119 53508216 -146121934 + HY3 scRNA scRNA 1 100 -1 368 339 0 9 chr5 53508279 53508394 -146121756 + L2 LINE L2 3187 3300 -13 287 167 0 51 chr5 53508409 53508487 -146121663 + (TGAA)n Simple_repeat Simple_repeat 2 75 0 1374 223 32 51 chr5 53509474 53509823 -146120327 - LTR16C LTR ERVL 0 491 150 1994 114 90 35 chr5 53509823 53510166 -146119984 + THE1B LTR MaLR 3 364 0 1374 223 32 51 chr5 53510166 53510228 -146119922 - LTR16C LTR ERVL -341 150 88 806 265 51 15 chr5 53510679 53510875 -146119275 - MIR SINE MIR -33 229 27 641 282 26 26 chr5 53511181 53511376 -146118774 + MIR3 SINE MIR 14 208 0 21 36 0 0 chr5 53511679 53511707 -146118443 + AT_rich Low_complexity Low_complexity 1 28 0 1546 209 64 69 chr5 53511827 53512565 -146117585 - L1MC5 LINE L1 -44 7917 7184 866 191 172 0 chr5 53513281 53513485 -146116665 - MER8 DNA MER2_type 0 239 1 527 217 9 23 chr5 53513485 53513640 -146116510 - L1MC5 LINE L1 -305 5826 5677 238 284 15 15 chr5 53513722 53513789 -146116361 + L2 LINE L2 3242 3308 -5 529 242 74 27 chr5 53514224 53514373 -146115777 + L2 LINE L2 3154 3309 -4 1780 228 168 26 chr5 53514448 53515192 -146114958 - L1MDa LINE L1 -5526 1014 38 554 311 106 65 chr5 53515359 53515830 -146114320 - L2 LINE L2 -1 3271 2790 1287 171 21 0 chr5 53515958 53516197 -146113953 + L1MB1 LINE L1 5921 6164 -4 21 0 0 0 chr5 53516199 53516220 -146113930 + AT_rich Low_complexity Low_complexity 1 21 0 4294 151 111 14 chr5 53516893 53517890 -146112260 - L1MDa LINE L1 -4407 2133 1040 2523 124 3 3 chr5 53517897 53518261 -146111889 - THE1B LTR MaLR 0 364 1 722 278 25 49 chr5 53518313 53518640 -146111510 - Charlie8 DNA MER1_type -2044 373 55 1473 181 86 18 chr5 53519586 53519912 -146110238 + MER7A DNA MER2_type 1 346 0 295 280 7 7 chr5 53520115 53520265 -146109885 + (CA)n Simple_repeat Simple_repeat 2 151 0 663 280 51 0 chr5 53520277 53520452 -146109698 + MIR SINE MIR 25 208 -54 258 315 14 27 chr5 53521288 53521361 -146108789 - MIR SINE MIR -124 84 13 1966 101 69 36 chr5 53521712 53522231 -146107919 - MER51A LTR ERV1 0 634 1 1219 181 68 4 chr5 53522537 53522786 -146107364 + MER63B DNA MER1_type 1 265 -171 1436 161 0 0 chr5 53522788 53523029 -146107121 - Tigger2 DNA MER2_type -1 2717 2474 2298 115 0 6 chr5 53523029 53523343 -146106807 + AluSx SINE Alu 1 312 0 4123 152 17 22 chr5 53523423 53523720 -146106430 - Tigger2 DNA MER2_type -1961 757 460 2088 113 3 3 chr5 53523720 53524029 -146106121 - AluSq SINE Alu 0 309 1 4123 152 17 22 chr5 53524029 53524491 -146105659 - Tigger2 DNA MER2_type -2258 460 1 732 175 21 0 chr5 53524491 53524634 -146105516 + MER63B DNA MER1_type 291 436 0 1635 242 42 5 chr5 53526632 53527037 -146103113 - LTR16C LTR ERVL 0 491 72 3772 167 22 14 chr5 53527317 53528049 -146102101 + L1MB3 LINE L1 5446 6183 0 23 0 0 0 chr5 53528055 53528078 -146102072 + AT_rich Low_complexity Low_complexity 1 23 0 191 314 0 43 chr5 53528551 53528621 -146101529 + L2 LINE L2 3206 3272 0 194 265 118 15 chr5 53529131 53529199 -146100951 + L2 LINE L2 3153 3227 -45 181 283 0 0 chr5 53529249 53529295 -146100855 + MIR SINE MIR 47 92 -116 204 156 0 0 chr5 53530771 53530803 -146099347 - L2 LINE L2 -17 3255 3224 847 247 54 48 chr5 53531311 53531752 -146098398 - L1MCa LINE L1 -5108 1318 875 208 272 72 78 chr5 53531965 53532145 -146098005 + L2 LINE L2 442 620 -2694 402 165 12 0 chr5 53532146 53532231 -146097919 - L1MB8 LINE L1 0 6178 6093 2689 161 73 4 chr5 53532271 53532811 -146097339 - L1MB4 LINE L1 -31 6149 5572 818 233 168 60 chr5 53532816 53533185 -146096965 + L2 LINE L2 627 1035 -2279 193 97 0 0 chr5 53533186 53533217 -146096933 + (TTTA)n Simple_repeat Simple_repeat 1 116 0 1260 96 0 0 chr5 53533217 53533374 -146096776 - AluSg/x SINE Alu -1 312 126 1485 266 57 7 chr5 53533374 53533828 -146096322 + L2 LINE L2 1028 1504 -1810 1261 211 159 15 chr5 53533961 53534186 -146095964 - L2 LINE L2 -2263 1051 860 857 131 162 61 chr5 53534186 53534384 -146095766 - MER20 DNA MER1_type -1 218 1 1261 211 159 15 chr5 53534384 53534617 -146095533 - L2 LINE L2 -2454 860 527 2211 104 0 19 chr5 53535330 53535648 -146094502 + AluSx SINE Alu 1 312 0 35 24 0 0 chr5 53535973 53536015 -146094135 + AT_rich Low_complexity Low_complexity 1 42 0 278 316 117 12 chr5 53536157 53536207 -146093943 + MIR SINE MIR 62 105 -157 2191 135 3 0 chr5 53536207 53536518 -146093632 - AluSx SINE Alu 0 312 1 278 316 117 12 chr5 53536518 53536638 -146093512 + MIR SINE MIR 105 250 -12 286 216 14 0 chr5 53538262 53538336 -146091814 + G-rich Low_complexity Low_complexity 3 77 0 2792 29 0 3 chr5 53539666 53539978 -146090172 + AluY SINE Alu 1 311 0 885 161 87 59 chr5 53539980 53540234 -146089916 - Charlie1 DNA MER1_type -1 2760 2500 2438 150 110 6 chr5 53540248 53540721 -146089429 - L1MB3 LINE L1 0 6183 5662 227 270 5 43 chr5 53545315 53545500 -146084650 + (CAAA)n Simple_repeat Simple_repeat 3 180 0 200 293 17 33 chr5 53545468 53545649 -146084501 + A-rich Low_complexity Low_complexity 2 179 0 * 642 200 48 0 chr5 53545821 53545966 -146084184 - MER63 DNA MER1_type 0 1060 909 * 2450 145 45 0 chr5 53545963 53546411 -146083739 + Tigger2 DNA MER2_type 5 472 -2246 1131 150 88 7 chr5 53546413 53546687 -146083463 + AluSq SINE Alu 1 296 -7 225 0 0 0 chr5 53550866 53550891 -146079259 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 13874 30 40 0 chr5 53551502 53553991 -146076159 + L1PA4 LINE L1 3597 6152 -3 401 250 40 26 chr5 53554538 53554690 -146075460 + AluSg/x SINE Alu 139 292 -17 376 237 98 17 chr5 53554835 53555008 -146075142 + L2 LINE L2 1532 1718 -1596 451 36 0 0 chr5 53555008 53555064 -146075086 + AluY SINE Alu 244 299 -12 447 19 0 0 chr5 53556021 53556073 -146074077 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 296 148 93 65 chr5 53556575 53556683 -146073467 - L1ME4a LINE L1 -25 6096 5986 1411 99 19 33 chr5 53556698 53556909 -146073241 + L1PA10 LINE L1 5950 6157 -11 530 313 80 79 chr5 53557807 53558644 -146071506 - ERVL LTR ERVL -201 5326 4447 1655 177 0 24 chr5 53558727 53559021 -146071129 + AluJo SINE Alu 1 287 -25 448 232 20 0 chr5 53559082 53559181 -146070969 - ERVL LTR ERVL -1384 4270 4170 264 244 58 12 chr5 53559252 53559338 -146070812 - ERVL LTR ERVL -1576 4188 4099 732 230 55 8 chr5 53559365 53559622 -146070528 - L2 LINE L2 -2280 1034 766 1389 153 5 5 chr5 53559882 53560105 -146070045 + MLT1D LTR MaLR 282 504 -1 258 281 124 77 chr5 53560107 53560574 -146069576 - L1ME LINE L1 -351 5770 5282 2164 121 14 0 chr5 53561707 53561997 -146068153 + AluSx SINE Alu 1 294 -18 308 68 0 0 chr5 53562060 53562104 -146068046 + L1PA3 LINE L1 6107 6150 -5 516 243 175 17 chr5 53562183 53562360 -146067790 - MIR SINE MIR -44 218 14 419 278 112 11 chr5 53562623 53562810 -146067340 + MIR SINE MIR 51 256 -6 1093 136 7 0 chr5 53562897 53563051 -146067099 - AluSg/x SINE Alu -18 292 138 44258 42 5 3 chr5 53563601 53569744 -146060406 - L1PA4 LINE L1 -3 6152 1 1389 67 67 6 chr5 53570302 53570482 -146059668 - AluY SINE Alu -79 232 42 461 245 106 20 chr5 53571126 53571277 -146058873 + MER5A DNA MER1_type 26 189 0 267 222 49 49 chr5 53572084 53572165 -146057985 - L1ME4a LINE L1 -76 6045 5965 5397 79 10 1 chr5 53572260 53572942 -146057208 - LTR12 LTR ERV1 0 688 1 4756 103 8 0 chr5 53572942 53573580 -146056570 - HERV9 LTR ERV1 0 8399 7757 456 98 0 76 chr5 53573575 53573613 -146056537 - HERV17 LTR ERV1 -5176 1720 1681 * 2407 92 148 5 chr5 53573613 53574005 -146056145 + LTR7 LTR ERV1 1 448 -2 456 98 0 76 chr5 53574005 53574058 -146056092 - HERV17 LTR ERV1 -5215 1681 1636 * 2083 90 48 51 chr5 53574056 53574135 -146056015 - HERV17 LTR ERV1 -3381 4404 4326 1530 43 5 0 chr5 53574135 53574322 -146055828 + L1PA4 LINE L1 5966 6153 -2 2083 90 48 51 chr5 53574322 53574982 -146055168 - HERV17 LTR ERV1 -3459 4326 708 * 6345 103 11 12 chr5 53574949 53575845 -146054305 - HERV17 LTR ERV1 -3425 4974 4080 15554 109 12 9 chr5 53575848 53579005 -146051145 - HERV17 LTR ERV1 -5257 3142 59 2433 83 162 179 chr5 53578984 53579624 -146050526 - LTR12 LTR ERV1 -130 584 20 * 276 162 162 0 chr5 53579637 53579705 -146050445 + MER116 DNA Mariner 1 79 -1 225 132 0 0 chr5 53580114 53580152 -146049998 + (TG)n Simple_repeat Simple_repeat 2 39 0 390 147 0 0 chr5 53581207 53581275 -146048875 + (CA)n Simple_repeat Simple_repeat 2 69 0 858 265 55 29 chr5 53581430 53581846 -146048304 - MER90 LTR ERV1 -6 569 37 274 333 68 36 chr5 53582104 53582296 -146047854 - L2 LINE L2 -480 2834 2637 1471 160 16 8 chr5 53582373 53582629 -146047521 + AluJo SINE Alu 6 263 -49 304 297 0 0 chr5 53582629 53582703 -146047447 + AluJ/FRAM SINE Alu 229 302 0 433 278 67 31 chr5 53582891 53583085 -146047065 + L2 LINE L2 3107 3307 -6 31450 102 19 37 chr5 53584735 53589604 -146040546 + L1P LINE L1 2 4781 -1365 635 174 9 0 chr5 53589604 53589703 -146040447 + L1MB7 LINE L1 6066 6175 -9 2209 122 0 0 chr5 53590665 53590960 -146039190 + AluSx SINE Alu 10 304 -8 260 272 123 0 chr5 53591359 53591440 -146038710 + MIR SINE MIR 16 106 -156 2632 33 0 3 chr5 53592059 53592359 -146037791 + AluY SINE Alu 1 299 -12 254 194 41 61 chr5 53592360 53592458 -146037692 + L1ME LINE L1 5728 5823 -343 262 243 14 14 chr5 53592492 53592566 -146037584 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 755 233 0 0 chr5 53592840 53592969 -146037181 - FRAM SINE Alu -47 129 1 189 309 0 0 chr5 53592986 53593028 -146037122 + L2 LINE L2 3210 3251 -21 1497 182 29 10 chr5 53593083 53593396 -146036754 - MER33 DNA MER1_type -5 319 1 707 210 0 70 chr5 53594020 53594163 -146035987 - FLAM_A SINE Alu 0 133 1 3098 179 34 69 chr5 53594328 53595036 -146035114 - MER44D DNA MER2_type 0 605 51 582 212 9 0 chr5 53595038 53595151 -146034999 - MER44D DNA MER2_type -588 117 4 429 310 16 0 chr5 53595631 53595760 -146034390 - L2 LINE L2 -1 3312 3182 2147 116 20 0 chr5 53597794 53598088 -146032062 + AluSx SINE Alu 5 304 -8 981 144 0 0 chr5 53598096 53598228 -146031922 + FLAM_C SINE Alu 1 132 -1 237 293 110 12 chr5 53598421 53598503 -146031647 - MIR SINE MIR -95 113 24 263 210 16 16 chr5 53598717 53598779 -146031371 - L1MD2 LINE L1 -86 6273 6212 2153 119 7 0 chr5 53599168 53599471 -146030679 + AluSx SINE Alu 1 305 -7 760 150 0 25 chr5 53599695 53599815 -146030335 - AluJb SINE Alu -19 293 177 801 151 0 0 chr5 53600307 53600426 -146029724 + FRAM SINE Alu 38 156 -20 2402 227 8 71 chr5 53600859 53601141 -146029009 - L1MD2 LINE L1 -419 5940 5642 360 0 0 0 chr5 53601141 53601181 -146028969 + (TA)n Simple_repeat Simple_repeat 2 41 0 2402 227 8 71 chr5 53601181 53601613 -146028537 - L1MD2 LINE L1 -717 5642 5271 258 206 0 0 chr5 53601626 53601694 -146028456 + T-rich Low_complexity Low_complexity 1 68 0 854 259 27 23 chr5 53601709 53601953 -146028197 - L1PA15-16 LINE L1 -4353 2496 2249 2027 137 3 0 chr5 53601953 53602246 -146027904 - AluSx SINE Alu -18 294 1 854 259 27 23 chr5 53602246 53602260 -146027890 - L1PA15-16 LINE L1 -4600 2249 2237 212 229 350 0 chr5 53603513 53603670 -146026480 - L2 LINE L2 -340 2974 2763 26 30 0 0 chr5 53604344 53604377 -146025773 + AT_rich Low_complexity Low_complexity 1 33 0 721 294 55 39 chr5 53604449 53604830 -146025320 - HAL1b LINE L1 -741 607 221 268 24 49 0 chr5 53604867 53604908 -146025242 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2394 57 0 0 chr5 53604911 53605192 -146024958 - AluY SINE Alu -30 281 1 291 167 0 0 chr5 53605206 53605248 -146024902 - 5S rRNA rRNA -79 42 1 819 206 5 33 chr5 53606725 53606909 -146023241 - MER49 LTR ERV1 0 923 745 287 317 7 35 chr5 53607063 53607208 -146022942 + CT-rich Low_complexity Low_complexity 3 143 0 527 252 50 0 chr5 53607414 53607553 -146022597 - AluJb SINE Alu -4 308 163 1546 185 0 11 chr5 53607609 53607896 -146022254 - AluJb SINE Alu -1 311 28 813 188 0 0 chr5 53608044 53608172 -146021978 - FLAM_A SINE Alu -5 128 1 255 273 172 20 chr5 53608179 53608278 -146021872 - L2 LINE L2 -11 3302 3189 524 105 35 12 chr5 53608706 53608792 -146021358 - LTR9 LTR ERV1 -115 497 410 2624 160 22 4 chr5 53608804 53609261 -146020889 - HUERS-P3 LTR ERV1 -8454 465 1 1296 98 6 0 chr5 53609261 53609435 -146020715 - LTR9 LTR ERV1 0 612 438 767 147 16 23 chr5 53609516 53609645 -146020505 - L1MC1 LINE L1 -5 6328 6201 1248 187 14 0 chr5 53609748 53609957 -146020193 - AluJo SINE Alu -100 212 1 522 260 68 73 chr5 53609957 53610326 -146019824 - L1M4 LINE L1 -2397 3749 3383 1826 164 0 0 chr5 53610328 53610603 -146019547 + AluJb SINE Alu 11 285 -27 225 211 0 0 chr5 53612404 53612442 -146017708 + tRNA-Val-GTG tRNA tRNA 1 38 -38 1487 157 130 27 chr5 53612503 53612764 -146017386 + AluJb SINE Alu 3 290 -12 282 219 20 41 chr5 53613005 53613151 -146016999 + (CAAGA)n Simple_repeat Simple_repeat 5 147 0 1596 148 10 59 chr5 53613980 53614270 -146015880 + AluJb SINE Alu 1 276 -36 2000 112 29 0 chr5 53614275 53614552 -146015598 - AluSg SINE Alu -21 289 5 341 48 0 0 chr5 53614552 53614594 -146015556 - AluY SINE Alu -260 42 1 240 200 200 0 chr5 53614594 53614631 -146015519 + 7SLRNA srpRNA srpRNA 269 320 0 484 261 82 43 chr5 53614711 53614895 -146015255 - MER58C DNA MER1_type -24 191 1 200 304 45 18 chr5 53615069 53615181 -146014969 - MIR SINE MIR -6 256 142 2420 50 3 13 chr5 53615864 53616162 -146013988 + AluY SINE Alu 1 295 -16 677 242 8 0 chr5 53617600 53617732 -146012418 + FLAM_A SINE Alu 1 133 0 1812 160 7 3 chr5 53617935 53618223 -146011927 - AluJb SINE Alu -3 309 21 730 170 0 0 chr5 53618277 53618417 -146011733 + AluSg/x SINE Alu 174 313 0 480 305 117 9 chr5 53618423 53618839 -146011311 + L1 LINE L1 3621 4080 -2066 1715 100 0 21 chr5 53618983 53619085 -146011065 - AluSq SINE Alu -79 234 131 2330 81 40 0 chr5 53619085 53619383 -146010767 - AluY SINE Alu 0 311 2 1715 100 0 21 chr5 53619383 53619519 -146010631 - AluSq SINE Alu -182 131 1 1591 165 4 0 chr5 53620200 53620448 -146009702 - AluJb SINE Alu -63 249 1 2154 125 6 10 chr5 53620553 53620866 -146009284 - AluSx SINE Alu 0 312 1 25 65 0 0 chr5 53621093 53621139 -146009011 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr5 53621828 53621850 -146008300 + AT_rich Low_complexity Low_complexity 1 22 0 745 148 82 0 chr5 53621980 53622102 -146008048 - FLAM_A SINE Alu -1 132 1 2111 109 10 20 chr5 53622372 53622676 -146007474 - AluSx SINE Alu -11 301 1 721 200 0 0 chr5 53622809 53622934 -146007216 - FLAM_A SINE Alu 0 142 18 2186 117 3 0 chr5 53622935 53623235 -146006915 + AluSx SINE Alu 1 301 -11 2370 100 0 7 chr5 53623430 53623740 -146006410 - AluSc SINE Alu -1 308 1 949 289 137 13 chr5 53623753 53624434 -146005716 - L1MC4a LINE L1 -339 5823 5146 302 225 25 0 chr5 53624462 53624542 -146005608 - L1MC4a LINE L1 -1488 4658 4577 235 230 78 120 chr5 53624588 53624659 -146005491 - L1MC4a LINE L1 -1541 4605 4533 2500 65 0 3 chr5 53624659 53624967 -146005183 - AluY SINE Alu -4 307 1 235 230 78 120 chr5 53624967 53625112 -146005038 - L1MC4a LINE L1 -1613 4533 4398 232 184 156 37 chr5 53625146 53625255 -146004895 - L1MC5 LINE L1 -36 7925 7804 817 169 61 15 chr5 53625256 53625473 -146004677 - MER106B DNA MER1_type -1 1058 2 249 203 175 0 chr5 53625532 53625635 -146004515 - L1ME3 LINE L1 -10 6154 6023 1927 133 3 20 chr5 53625707 53626001 -146004149 - AluJb SINE Alu -23 289 1 2308 84 0 3 chr5 53626160 53626458 -146003692 + AluY SINE Alu 14 310 -1 2336 102 0 0 chr5 53626529 53626834 -146003316 + AluSq SINE Alu 5 309 -4 279 245 0 0 chr5 53626858 53626952 -146003198 + (TA)n Simple_repeat Simple_repeat 2 95 0 426 210 89 153 chr5 53626976 53627447 -146002703 - L1MC4a LINE L1 -2030 4116 3676 1864 194 55 37 chr5 53627459 53627759 -146002391 - MLT1C LTR MaLR 0 467 154 1915 118 44 0 chr5 53627759 53628057 -146002093 + AluSx SINE Alu 1 310 0 1864 194 55 37 chr5 53628057 53628209 -146001941 - MLT1C LTR MaLR -313 154 6 2131 72 4 8 chr5 53629087 53629352 -146000798 + AluY SINE Alu 36 299 -12 22 70 0 0 chr5 53630242 53630285 -145999865 + AT_rich Low_complexity Low_complexity 1 43 0 608 159 71 0 chr5 53630473 53630586 -145999564 - L2 LINE L2 -4 3309 3189 1867 132 28 21 chr5 53631074 53631363 -145998787 + AluJo SINE Alu 2 292 -20 540 223 153 96 chr5 53631388 53631589 -145998561 - MIR SINE MIR -10 252 35 1486 184 49 7 chr5 53631589 53631877 -145998273 - AluJo SINE Alu -12 300 1 540 223 153 96 chr5 53631877 53631904 -145998246 - MIR SINE MIR -227 35 11 2411 81 0 0 chr5 53632256 53632552 -145997598 + AluSg SINE Alu 1 296 -14 2215 126 0 0 chr5 53632946 53633248 -145996902 + AluSx SINE Alu 1 302 -10 216 0 0 0 chr5 53633428 53633452 -145996698 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2192 120 7 0 chr5 53633827 53634135 -145996015 - AluSq SINE Alu -2 311 2 342 331 77 12 chr5 53634289 53634458 -145995692 + L3b LINE CR1 1286 1465 -118 2379 97 0 0 chr5 53634665 53634964 -145995186 + AluSg1 SINE Alu 1 299 -10 2300 93 3 3 chr5 53635122 53635423 -145994727 + AluSp SINE Alu 1 301 -12 2257 129 0 0 chr5 53636362 53636673 -145993477 - AluSx SINE Alu -1 311 1 21 0 0 0 chr5 53637020 53637041 -145993109 + AT_rich Low_complexity Low_complexity 1 21 0 238 205 26 26 chr5 53637233 53637311 -145992839 - L1M4 LINE L1 -680 5504 5427 974 88 37 0 chr5 53637328 53637464 -145992686 - L1MA4 LINE L1 -6 6294 6154 585 229 93 3 chr5 53637467 53637710 -145992440 - L1P5 LINE L1 -712 5439 5172 933 91 17 97 chr5 53637846 53637959 -145992191 + L1MB8 LINE L1 5672 5768 -410 2306 98 3 0 chr5 53637959 53638255 -145991895 - AluSx SINE Alu -15 297 1 933 91 17 97 chr5 53638255 53638316 -145991834 + L1MB8 LINE L1 5768 5832 -346 446 132 123 75 chr5 53638314 53638420 -145991730 + L1MB8 LINE L1 6067 6177 -1 * 373 255 41 28 chr5 53639009 53639154 -145990996 - L1ME4a LINE L1 -49 6072 5926 1730 178 29 26 chr5 53639163 53639472 -145990678 + AluJb SINE Alu 1 310 -2 248 277 15 31 chr5 53639725 53639790 -145990360 + MIR SINE MIR 28 91 -171 2072 129 17 0 chr5 53639832 53640119 -145990031 - AluSx SINE Alu -20 292 1 1148 234 14 5 chr5 53640563 53640785 -145989365 - MER58A DNA MER1_type 0 224 1 3242 207 99 26 chr5 53640785 53640860 -145989290 + L1MEc LINE L1 2057 2125 -4090 1851 158 21 0 chr5 53640860 53641144 -145989006 + AluJb SINE Alu 3 292 -20 3067 43 0 3 chr5 53641144 53641491 -145988659 + L1PA3 LINE L1 5805 6150 -5 2084 111 14 0 chr5 53641494 53641791 -145988359 + AluSg1 SINE Alu 1 301 -8 3242 207 99 26 chr5 53641791 53641952 -145988198 + L1MEc LINE L1 2126 2274 -3941 2209 128 0 0 chr5 53641952 53642257 -145987893 + AluSx SINE Alu 1 305 -7 3242 207 99 26 chr5 53642257 53643099 -145987051 + L1MEc LINE L1 2274 3188 -3027 2234 99 0 3 chr5 53643868 53644160 -145985990 + AluY SINE Alu 1 291 -20 5477 180 37 22 chr5 53644207 53645073 -145985077 + Tigger6a DNA MER2_type 1 887 -710 2304 82 0 10 chr5 53645073 53645364 -145984786 + AluSp SINE Alu 1 288 -25 5477 180 37 22 chr5 53645364 53645564 -145984586 + Tigger6a DNA MER2_type 887 1083 0 2344 106 0 0 chr5 53645927 53646229 -145983921 + AluSx SINE Alu 1 302 -10 214 159 95 63 chr5 53646358 53646421 -145983729 - MIR SINE MIR -1 261 197 1389 113 4 2 chr5 53646909 53647175 -145982975 - AluSq SINE Alu -1 312 2 205 196 36 18 chr5 53647342 53647398 -145982752 + T-rich Low_complexity Low_complexity 2 58 0 784 290 20 28 chr5 53648285 53648540 -145981610 + MIR SINE MIR 10 262 0 390 322 42 0 chr5 53648548 53648666 -145981484 - L2 LINE L2 -17 3255 3133 318 301 117 15 chr5 53650758 53650954 -145979196 + MIR SINE MIR 46 261 -1 205 205 0 0 chr5 53651217 53651256 -145978894 + A-rich Low_complexity Low_complexity 1 39 0 427 215 32 57 chr5 53651981 53652212 -145977938 - MER5C DNA MER1_type 0 324 3 287 306 31 20 chr5 53652564 53652662 -145977488 + L3b LINE CR1 1414 1512 -71 3175 126 137 16 chr5 53652820 53652900 -145977250 - MER39B LTR ERV1 -5 648 579 1811 151 26 20 chr5 53652900 53653205 -145976945 + AluJb SINE Alu 1 307 -5 3175 126 137 16 chr5 53653205 53653702 -145976448 - MER39B LTR ERV1 -74 579 1 2383 70 0 3 chr5 53653754 53654052 -145976098 - AluY SINE Alu -14 297 1 23 33 0 0 chr5 53654104 53654134 -145976016 + AT_rich Low_complexity Low_complexity 1 30 0 4801 173 91 31 chr5 53654942 53655053 -145975097 - Charlie1 DNA MER1_type -15 2746 2643 2267 109 0 3 chr5 53655053 53655357 -145974793 - AluSq SINE Alu -9 304 2 4801 173 91 31 chr5 53655357 53655436 -145974714 - Charlie1 DNA MER1_type -118 2643 2570 895 101 0 0 chr5 53655436 53655555 -145974595 + L1MA2 LINE L1 6186 6304 0 4801 173 91 31 chr5 53655555 53655592 -145974558 - Charlie1 DNA MER1_type -191 2570 2537 2349 97 0 0 chr5 53655592 53655902 -145974248 + AluSg SINE Alu 1 310 0 4801 173 91 31 chr5 53655902 53656822 -145973328 - Charlie1 DNA MER1_type -224 2537 1528 827 159 90 14 chr5 53656842 53656987 -145973163 + FRAM SINE Alu 1 153 -23 24 0 0 0 chr5 53656987 53657011 -145973139 + AT_rich Low_complexity Low_complexity 1 24 0 4533 83 2 2 chr5 53660733 53661287 -145968863 - MER41A LTR ERV1 0 554 1 239 305 73 24 chr5 53661738 53661902 -145968248 - L1MC5 LINE L1 -44 7917 7746 288 243 0 4 chr5 53662227 53662309 -145967841 + AluJ/monomer SINE Alu 1 55 -246 2303 105 0 3 chr5 53662484 53662790 -145967360 + AluSq SINE Alu 1 305 -8 1489 166 33 30 chr5 53662803 53663074 -145967076 + AluJb SINE Alu 18 289 -23 22 35 0 0 chr5 53663075 53663104 -145967046 + AT_rich Low_complexity Low_complexity 1 29 0 2420 77 3 3 chr5 53663104 53663403 -145966747 + AluSp SINE Alu 1 299 -14 1901 149 0 17 chr5 53665389 53665685 -145964465 - AluSx SINE Alu -21 291 1 200 239 76 33 chr5 53665751 53665843 -145964307 + L2 LINE L2 3218 3313 0 367 233 89 0 chr5 53665959 53666049 -145964101 - L2 LINE L2 -2 3270 3173 1538 181 47 17 chr5 53666281 53666579 -145963571 + AluJo SINE Alu 1 307 -5 582 191 78 14 chr5 53666826 53666928 -145963222 - MER69A DNA AcHobo -2350 176 61 2290 98 0 13 chr5 53666928 53667233 -145962917 + AluSq SINE Alu 1 301 -12 582 191 78 14 chr5 53667233 53667271 -145962879 - MER69A DNA AcHobo -2465 61 27 203 231 77 31 chr5 53667995 53668060 -145962090 + L2 LINE L2 2682 2749 -565 1057 187 0 0 chr5 53668083 53668249 -145961901 + AluJo SINE Alu 1 166 -146 719 160 42 0 chr5 53668250 53668369 -145961781 - LTR12 LTR ERV1 -234 480 357 344 175 0 0 chr5 53668370 53668433 -145961717 - LTR30 LTR ERV1 -108 614 552 957 86 452 5 chr5 53668433 53668630 -145961520 - LTR12 LTR ERV1 -429 285 1 5585 90 24 0 chr5 53668630 53669386 -145960764 - HERV9 LTR ERV1 0 8399 7626 2304 186 93 65 chr5 53669384 53670194 -145959956 - HERV9 LTR ERV1 -5156 1740 909 * 6874 105 17 24 chr5 53670176 53671197 -145958953 - HERV9 LTR ERV1 -3243 5156 4143 1029 113 0 0 chr5 53671192 53671333 -145958817 - HERV9 LTR ERV1 -8179 220 80 * 7751 123 106 94 chr5 53671340 53673017 -145957133 - pTR5 LTR ERV1 0 2438 743 803 86 57 79 chr5 53673025 53673165 -145956985 - pTR5 LTR ERV1 -2001 437 301 342 231 11 0 chr5 53673165 53673256 -145956894 - LTR30 LTR ERV1 -79 643 552 1034 72 456 0 chr5 53673256 53673451 -145956699 - LTR12 LTR ERV1 -429 285 2 903 168 0 0 chr5 53673451 53673588 -145956562 + AluJo SINE Alu 162 298 -14 940 231 51 8 chr5 53673612 53673867 -145956283 + L1ME1 LINE L1 5870 6135 -31 619 264 110 36 chr5 53674026 53674163 -145955987 + L1ME4a LINE L1 5506 5631 -490 1920 119 45 0 chr5 53674163 53674432 -145955718 + AluSx SINE Alu 1 281 -31 288 0 0 0 chr5 53674435 53674467 -145955683 + (TA)n Simple_repeat Simple_repeat 2 33 0 619 264 110 36 chr5 53674467 53674688 -145955462 + L1ME4a LINE L1 5632 5895 -226 352 249 79 6 chr5 53674700 53674865 -145955285 + L1ME4a LINE L1 5931 6107 -14 2347 88 0 13 chr5 53674907 53675214 -145954936 + AluSg SINE Alu 1 303 -7 196 340 173 51 chr5 53675571 53675941 -145954209 + L2 LINE L2 2858 3272 0 2002 138 6 22 chr5 53676045 53676387 -145953763 + AluSx SINE Alu 1 312 0 198 244 98 81 chr5 53676760 53676883 -145953267 + MIR3 SINE MIR 48 172 -36 332 54 0 107 chr5 53677335 53677391 -145952759 - MLT2B1 LTR ERVL -5 515 466 348 24 0 0 chr5 53677393 53677434 -145952716 + (TG)n Simple_repeat Simple_repeat 2 42 0 5066 104 17 191 chr5 53677435 53677647 -145952503 - Tigger1 DNA MER2_type 0 2418 2171 2466 68 0 10 chr5 53677647 53677954 -145952196 - AluSp SINE Alu -8 305 2 5066 104 17 191 chr5 53677954 53678150 -145952000 - Tigger1 DNA MER2_type -247 2171 1943 1481 201 20 34 chr5 53678150 53678302 -145951848 - AluJo SINE Alu -22 290 142 2187 112 0 3 chr5 53678302 53678596 -145951554 - AluSx SINE Alu -19 293 1 1481 201 20 34 chr5 53678596 53678737 -145951413 - AluJo SINE Alu -170 142 1 5066 104 17 191 chr5 53678737 53678768 -145951382 - Tigger1 DNA MER2_type -475 1943 1908 2526 74 3 0 chr5 53678768 53679077 -145951073 - AluSp SINE Alu -3 310 1 5066 104 17 191 chr5 53679077 53679093 -145951057 - Tigger1 DNA MER2_type -510 1908 1891 2286 96 0 6 chr5 53679093 53679406 -145950744 - AluSx SINE Alu -1 311 1 5066 104 17 191 chr5 53679406 53679882 -145950268 - Tigger1 DNA MER2_type -527 1891 1334 1666 145 64 11 chr5 53679882 53680165 -145949985 - AluJb SINE Alu -6 306 9 5066 104 17 191 chr5 53680165 53680219 -145949931 - Tigger1 DNA MER2_type -1084 1334 1272 2515 74 3 0 chr5 53680219 53680528 -145949622 - AluSp SINE Alu -3 310 1 5066 104 17 191 chr5 53680528 53680718 -145949432 - Tigger1 DNA MER2_type -1146 1272 1473 2346 77 3 0 chr5 53680718 53681031 -145949119 + AluSp SINE Alu 1 314 0 5066 104 17 191 chr5 53681031 53681128 -145949022 - Tigger1 DNA MER2_type -944 1474 1362 293 289 24 0 chr5 53681646 53681729 -145948421 + L2 LINE L2 3188 3272 0 2730 132 5 8 chr5 53681832 53682234 -145947916 + MER57A LTR ERV1 1 401 -2 885 122 0 0 chr5 53683743 53683888 -145946262 + AluSg/x SINE Alu 162 306 0 2266 104 0 3 chr5 53683937 53684236 -145945914 + AluSq SINE Alu 1 298 -15 1467 140 40 16 chr5 53684236 53684486 -145945664 - MLT1B LTR MaLR -134 256 1 216 289 56 33 chr5 53684493 53684583 -145945567 + MIR3 SINE MIR 108 199 -9 237 139 0 0 chr5 53685055 53685098 -145945052 + (A)n Simple_repeat Simple_repeat 1 43 0 239 361 33 0 chr5 53686239 53686361 -145943789 - L2 LINE L2 0 3272 3147 600 199 86 124 chr5 53687009 53687120 -145943030 + L1MC4 LINE L1 7459 7573 -469 2410 112 0 0 chr5 53687120 53687432 -145942718 - AluSx SINE Alu 0 312 1 600 199 86 124 chr5 53687432 53687464 -145942686 + L1MC4 LINE L1 7573 7605 -437 2049 128 7 7 chr5 53687464 53687762 -145942388 + AluSx SINE Alu 1 298 -14 600 199 86 124 chr5 53687762 53687884 -145942266 + L1MC4 LINE L1 7605 7715 -327 425 248 53 0 chr5 53687891 53688024 -145942126 + L1MC4 LINE L1 7903 8042 0 2336 100 0 28 chr5 53689380 53689701 -145940449 + AluSx SINE Alu 1 312 0 2187 131 0 0 chr5 53689946 53690243 -145939907 - AluSx SINE Alu -15 297 1 2122 104 42 0 chr5 53690243 53690529 -145939621 - AluSx SINE Alu -10 302 5 2287 89 0 0 chr5 53690701 53691038 -145939112 + AluSg SINE Alu 1 337 0 2192 113 13 0 chr5 53692067 53692368 -145937782 + AluSg SINE Alu 1 305 -5 1941 128 10 21 chr5 53692398 53692711 -145937439 + AluSx SINE Alu 1 310 0 1321 94 26 0 chr5 53693295 53693487 -145936663 + L1MB7 LINE L1 5505 5701 -483 1457 161 32 0 chr5 53693487 53693736 -145936414 + L1MB7 LINE L1 5909 6165 -19 2211 110 0 3 chr5 53693892 53694193 -145935957 + AluSx SINE Alu 1 300 -12 308 345 91 9 chr5 53694203 53694545 -145935605 - L2 LINE L2 0 3272 2898 611 234 5 64 chr5 53694628 53694816 -145935334 - MLT1L LTR MaLR 0 615 439 414 0 0 0 chr5 53694860 53694906 -145935244 + (CA)n Simple_repeat Simple_repeat 2 47 0 236 270 160 19 chr5 53694930 53695139 -145935011 - MLT1K LTR MaLR -180 408 149 17366 32 8 1 chr5 53695820 53698684 -145931466 + L1PA3 LINE L1 3310 6155 0 631 271 36 32 chr5 53698831 53698909 -145931241 + L1ME4a LINE L1 5448 5524 -597 2204 107 7 17 chr5 53698909 53699209 -145930941 - AluSx SINE Alu -12 300 4 631 271 36 32 chr5 53699209 53699410 -145930740 + L1ME4a LINE L1 5524 5728 -393 2085 112 45 3 chr5 53699584 53699871 -145930279 + AluSg SINE Alu 1 299 -11 240 231 51 0 chr5 53699876 53699954 -145930196 + (TATATG)n Simple_repeat Simple_repeat 2 83 0 604 278 32 39 chr5 53699969 53700253 -145929897 + L1ME4a LINE L1 5837 6118 -3 770 138 0 23 chr5 53700444 53700693 -145929457 + AluJo SINE Alu 2 309 -3 275 302 28 19 chr5 53700754 53700860 -145929290 + MER115 DNA AcHobo 18 124 -569 1303 223 63 22 chr5 53701039 53701358 -145928792 + MER115 DNA AcHobo 362 693 0 948 274 61 66 chr5 53701789 53702079 -145928071 + L1MC4a LINE L1 5309 5599 -2209 1732 128 8 8 chr5 53702079 53702337 -145927813 + AluSx SINE Alu 50 307 -5 948 274 61 66 chr5 53702337 53702486 -145927664 + L1MC4a LINE L1 5599 5747 -2061 2400 85 0 25 chr5 53702486 53702803 -145927347 + AluSg SINE Alu 1 309 -1 948 274 61 66 chr5 53702803 53702954 -145927196 + L1MC4a LINE L1 5747 5897 -1911 * 1479 223 65 51 chr5 53702951 53703462 -145926688 + L1MC4 LINE L1 7537 7995 0 659 250 63 110 chr5 53703868 53704065 -145926085 - L1ME4a LINE L1 -76 6045 5840 411 106 0 0 chr5 53704065 53704131 -145926019 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 1863 163 7 0 chr5 53704131 53704420 -145925730 - AluJo SINE Alu -21 291 1 659 250 63 110 chr5 53704420 53704624 -145925526 - L1ME4a LINE L1 -280 5841 5662 2277 122 3 0 chr5 53704624 53704935 -145925215 - AluSx SINE Alu 0 312 1 659 250 63 110 chr5 53704935 53704959 -145925191 - L1ME4a LINE L1 -459 5662 5638 1665 127 4 22 chr5 53704959 53705226 -145924924 + AluSg SINE Alu 1 262 -48 278 271 75 9 chr5 53705351 53705458 -145924692 - L1ME4a LINE L1 -479 5642 5529 2040 113 9 35 chr5 53705645 53705963 -145924187 - AluSx SINE Alu -2 310 1 1138 144 64 11 chr5 53706075 53706262 -145923888 + AluJb SINE Alu 90 286 -26 1950 146 3 7 chr5 53706283 53706585 -145923565 + AluJb SINE Alu 1 301 -11 420 242 176 7 chr5 53706745 53706898 -145923252 - MER5A DNA MER1_type -1 188 10 420 242 176 7 chr5 53707597 53707750 -145922400 - MER5A DNA MER1_type -1 188 10 2378 96 7 0 chr5 53708351 53708653 -145921497 - AluSx SINE Alu -8 304 1 201 200 0 0 chr5 53708653 53708688 -145921462 - L2 LINE L2 -564 2750 2716 650 154 0 18 chr5 53710428 53710538 -145919612 + FLAM_C SINE Alu 36 143 0 1357 157 130 30 chr5 53711039 53711301 -145918849 + AluJb SINE Alu 3 290 -12 396 179 84 0 chr5 53711426 53711521 -145918629 - L1MD2 LINE L1 -103 6256 6154 635 213 59 0 chr5 53711646 53711782 -145918368 - L1MD2 LINE L1 -219 6140 5997 2239 109 0 10 chr5 53711790 53712092 -145918058 - AluSx SINE Alu -13 299 1 287 254 0 14 chr5 53712149 53712220 -145917930 + MIR SINE MIR 11 80 -182 * 432 301 9 74 chr5 53712209 53712287 -145917863 - MIR SINE MIR -41 221 140 2229 132 3 0 chr5 53712287 53712598 -145917552 - AluSx SINE Alu 0 312 1 432 301 9 74 chr5 53712598 53712735 -145917415 - MIR SINE MIR -122 140 20 245 165 0 174 chr5 53712877 53712915 -145917235 + LTR37B LTR ERV1 192 235 -233 1706 157 6 68 chr5 53712915 53713240 -145916910 + AluJb SINE Alu 1 305 -7 245 165 0 174 chr5 53713240 53713286 -145916864 + LTR37B LTR ERV1 235 256 -212 4249 169 17 25 chr5 53713286 53714049 -145916101 - L1MC2 LINE L1 0 6344 5586 2305 121 0 0 chr5 53714049 53714356 -145915794 + AluSx SINE Alu 1 307 -5 4249 169 17 25 chr5 53714356 53714404 -145915746 - L1MC2 LINE L1 -758 5586 5539 245 165 0 174 chr5 53714404 53714427 -145915723 + LTR37B LTR ERV1 256 281 -187 1868 129 43 4 chr5 53714514 53714792 -145915358 + AluSx SINE Alu 4 292 -20 646 236 20 20 chr5 53714792 53714987 -145915163 + LTR37B LTR ERV1 272 466 -2 8285 53 9 0 chr5 53715185 53716142 -145914008 - LTR5 LTR ERVK -3 966 1 306 106 0 0 chr5 53716690 53716737 -145913413 + (CA)n Simple_repeat Simple_repeat 1 47 0 207 100 0 0 chr5 53716868 53716898 -145913252 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 355 78 0 0 chr5 53717202 53717253 -145912897 + MADE1 DNA Mariner 1 51 -29 1381 67 0 51 chr5 53718497 53718580 -145911570 + L1PB1 LINE L1 5606 5692 -459 2353 112 0 3 chr5 53718580 53718892 -145911258 + AluSx SINE Alu 1 311 -1 1381 67 0 51 chr5 53718892 53719003 -145911147 + L1PB1 LINE L1 5692 5790 -361 421 22 44 44 chr5 53719010 53719101 -145911049 + (TA)n Simple_repeat Simple_repeat 1 91 0 2422 115 17 0 chr5 53719102 53719458 -145910692 + L1PB1 LINE L1 5782 6143 -8 333 143 0 33 chr5 53719494 53719551 -145910599 + L1MA4 LINE L1 6013 6065 -235 2199 113 0 3 chr5 53719551 53719842 -145910308 + AluSg SINE Alu 1 290 -20 333 143 0 33 chr5 53719842 53719873 -145910277 + L1MA4 LINE L1 6065 6095 -205 216 132 66 26 chr5 53719969 53720045 -145910105 + (TA)n Simple_repeat Simple_repeat 1 79 0 1780 148 36 11 chr5 53720184 53720485 -145909665 - AluSx SINE Alu 0 308 1 577 229 169 3 chr5 53720486 53720676 -145909474 - L1M3 LINE L1 -307 5814 5611 1557 159 33 22 chr5 53720709 53720980 -145909170 + AluJo SINE Alu 21 294 -18 2272 96 0 7 chr5 53720982 53721284 -145908866 + AluY SINE Alu 1 300 -11 2304 90 7 0 chr5 53721450 53721740 -145908410 - AluY SINE Alu -19 292 1 1883 145 13 13 chr5 53722377 53722513 -145907637 + AluSx SINE Alu 1 136 -176 2315 115 0 3 chr5 53722513 53722827 -145907323 + AluSq SINE Alu 1 313 0 1883 145 13 13 chr5 53722827 53722994 -145907156 + AluSx SINE Alu 135 304 -8 1866 139 7 21 chr5 53723008 53723318 -145906832 + AluJb SINE Alu 6 311 0 2202 105 26 7 chr5 53723387 53723693 -145906457 - AluSx SINE Alu 0 312 1 2392 150 64 14 chr5 53723894 53724315 -145905835 - Tigger5 DNA MER2_type 0 2323 1882 551 145 0 0 chr5 53724310 53724393 -145905757 - Tigger5 DNA MER2_type -2085 238 156 * 2100 126 3 0 chr5 53724415 53724724 -145905426 - AluSq SINE Alu -3 310 1 1814 147 10 27 chr5 53724725 53725024 -145905126 - AluJb SINE Alu -18 294 1 829 122 65 0 chr5 53725047 53725170 -145904980 - AluJb SINE Alu -176 136 6 260 337 42 36 chr5 53725484 53725650 -145904500 + MER5A DNA MER1_type 9 175 -14 1316 266 66 53 chr5 53725797 53726309 -145903841 + LTR33A LTR ERVL 5 523 0 201 250 0 0 chr5 53726544 53726592 -145903558 + L2 LINE L2 3263 3310 -3 28 48 0 0 chr5 53727042 53727084 -145903066 + AT_rich Low_complexity Low_complexity 1 42 0 3001 3 0 0 chr5 53727095 53727410 -145902740 - AluYb8 SINE Alu -3 315 1 1827 163 0 0 chr5 53727410 53727692 -145902458 - AluJb SINE Alu -30 282 1 4404 107 19 48 chr5 53727699 53728002 -145902148 - L1PA16 LINE L1 -200 5966 5656 2336 113 3 0 chr5 53728002 53728312 -145901838 - AluSq SINE Alu -2 311 1 4404 107 19 48 chr5 53728312 53728715 -145901435 - L1PA16 LINE L1 -510 5656 5285 894 56 0 0 chr5 53728901 53729008 -145901142 - AluSc SINE Alu -8 301 195 2962 76 14 30 chr5 53729038 53729474 -145900676 - L1PA16 LINE L1 -1316 4830 4402 2281 218 84 22 chr5 53729492 53729933 -145900217 + L1ME3A LINE L1 5293 5782 -388 1717 175 32 23 chr5 53729933 53730241 -145899909 + AluJb SINE Alu 1 311 -1 2281 218 84 22 chr5 53730241 53730396 -145899754 + L1ME3A LINE L1 5782 5926 -244 1048 148 6 12 chr5 53730407 53730569 -145899581 + FRAM SINE Alu 1 160 -16 2007 197 24 84 chr5 53730781 53731247 -145898903 + MLT1D LTR MaLR 1 432 -73 1613 174 25 14 chr5 53731247 53731522 -145898628 - AluJo SINE Alu -32 280 3 2007 197 24 84 chr5 53731522 53731592 -145898558 + MLT1D LTR MaLR 432 505 0 606 210 65 0 chr5 53732385 53732509 -145897641 - MLT1D LTR MaLR -9 496 365 805 170 57 13 chr5 53732545 53732704 -145897446 - MLT1D LTR MaLR -308 197 32 2196 100 7 13 chr5 53732722 53733023 -145897127 - AluSx SINE Alu -13 299 1 3600 156 77 24 chr5 53733030 53733142 -145897008 - MER6 DNA MER2_type -150 715 610 1848 157 0 10 chr5 53733142 53733441 -145896709 - AluJo SINE Alu -16 296 1 3600 156 77 24 chr5 53733441 53733562 -145896588 - MER6 DNA MER2_type -255 610 497 248 0 31 0 chr5 53733562 53733594 -145896556 + (CA)n Simple_repeat Simple_repeat 2 34 0 3600 156 77 24 chr5 53733594 53734038 -145896112 - MER6 DNA MER2_type -368 497 1 206 355 0 13 chr5 53734071 53734147 -145896003 + MER5A DNA MER1_type 87 161 -28 2379 73 0 7 chr5 53734244 53734565 -145895585 + AluSq SINE Alu 1 313 0 207 295 39 26 chr5 53737912 53737990 -145892160 + MIR3 SINE MIR 124 202 -6 328 369 65 9 chr5 53738109 53738323 -145891827 - MIR SINE MIR -14 248 23 1736 168 3 11 chr5 53738446 53738732 -145891418 + AluJo SINE Alu 18 301 -11 2399 78 0 23 chr5 53740364 53740670 -145889480 - AluY SINE Alu -12 299 1 21 0 0 0 chr5 53740964 53740985 -145889165 + AT_rich Low_complexity Low_complexity 1 21 0 2285 116 0 3 chr5 53740990 53741300 -145888850 - AluSc SINE Alu 0 309 1 22 0 0 0 chr5 53741662 53741684 -145888466 + AT_rich Low_complexity Low_complexity 1 22 0 414 259 19 37 chr5 53741686 53741794 -145888356 - MER5A DNA MER1_type -80 109 4 923 221 17 75 chr5 53742003 53742142 -145888008 - MIR SINE MIR 0 262 137 1771 115 0 4 chr5 53742142 53742405 -145887745 + AluSx SINE Alu 54 315 0 923 221 17 75 chr5 53742405 53742500 -145887650 - MIR SINE MIR -125 137 38 471 233 52 71 chr5 53742593 53742768 -145887382 + MER5A DNA MER1_type 7 189 0 2381 86 3 6 chr5 53743102 53743415 -145886735 - AluSq SINE Alu -1 312 1 2641 61 0 0 chr5 53743671 53743982 -145886168 + AluSq SINE Alu 2 312 -1 1651 175 10 14 chr5 53744199 53744491 -145885659 - AluJo SINE Alu -21 291 1 820 188 8 0 chr5 53744493 53744621 -145885529 - FLAM_A SINE Alu -4 129 1 2305 94 10 0 chr5 53744742 53745049 -145885101 + AluSg SINE Alu 1 310 0 233 271 52 83 chr5 53745065 53745161 -145884989 + L3 LINE CR1 284 376 -1201 299 289 116 40 chr5 53746302 53746475 -145883675 - MLT1L LTR MaLR -223 392 207 373 231 82 37 chr5 53746484 53746618 -145883532 + L1ME3A LINE L1 5185 5324 -822 853 288 69 24 chr5 53746619 53747073 -145883077 + L1ME3A LINE L1 5293 5806 -378 307 254 48 48 chr5 53747074 53747200 -145882950 + L1ME3A LINE L1 5840 5965 -205 2181 107 0 7 chr5 53747364 53747663 -145882487 - AluSx SINE Alu -15 297 1 1628 103 4 4 chr5 53747726 53747958 -145882192 - AluSg/x SINE Alu 0 312 81 272 116 0 23 chr5 53747958 53748001 -145882149 - Alu SINE Alu -266 42 1 258 111 0 0 chr5 53748650 53748686 -145881464 - LTR24C LTR ERV1 -80 555 520 2248 91 0 26 chr5 53748980 53749147 -145881003 - AluSx SINE Alu -13 299 142 2316 101 7 0 chr5 53749147 53749455 -145880695 - AluSp SINE Alu -3 310 1 2248 91 0 26 chr5 53749455 53749594 -145880556 - AluSx SINE Alu -170 142 1 2157 85 3 14 chr5 53749676 53750014 -145880136 - AluSc SINE Alu 0 335 1 204 306 133 0 chr5 53750048 53750146 -145880004 + L2 LINE L2 3203 3313 0 32 56 0 14 chr5 53750219 53750231 -145879919 + AT_rich Low_complexity Low_complexity 1 12 -58 1798 73 20 0 chr5 53750231 53750476 -145879674 + L1MA2 LINE L1 6055 6304 0 32 56 0 14 chr5 53750476 53750534 -145879616 + AT_rich Low_complexity Low_complexity 12 70 0 208 214 0 0 chr5 53750563 53750605 -145879545 + L2 LINE L2 3268 3309 -4 200 64 43 128 chr5 53751214 53751261 -145878889 - MIR SINE MIR -101 161 119 1410 175 128 85 chr5 53751318 53751763 -145878387 - MER31B LTR ERV1 0 466 3 2114 118 7 0 chr5 53753816 53754122 -145876028 - AluSx SINE Alu -4 308 1 2309 82 7 0 chr5 53754252 53754543 -145875607 - AluSg1 SINE Alu -12 297 5 25 31 0 0 chr5 53754591 53754623 -145875527 + AT_rich Low_complexity Low_complexity 1 32 0 185 164 0 73 chr5 53757933 53757988 -145872162 + (TATATG)n Simple_repeat Simple_repeat 1 51 0 423 320 56 0 chr5 53758686 53758811 -145871339 - L2 LINE L2 0 3272 3141 1206 253 140 38 chr5 53759172 53759643 -145870507 + LTR33 LTR ERVL 1 519 -2 312 315 0 37 chr5 53760134 53760242 -145869908 - L2 LINE L2 0 3272 3169 2618 56 0 0 chr5 53760269 53760573 -145869577 - AluY SINE Alu -7 304 1 218 264 19 38 chr5 53761407 53761513 -145868637 + CT-rich Low_complexity Low_complexity 2 105 0 881 128 7 43 chr5 53761588 53761729 -145868421 + AluJo SINE Alu 1 136 -176 408 229 188 35 chr5 53761794 53761964 -145868186 + MIR SINE MIR 17 212 -50 2156 108 3 17 chr5 53762400 53762695 -145867455 - AluSq SINE Alu -22 291 1 1582 124 55 0 chr5 53762839 53763057 -145867093 - MER30 DNA MER1_type 0 230 1 314 249 87 87 chr5 53763341 53763526 -145866624 - L2 LINE L2 -219 3053 2869 298 337 189 0 chr5 53763596 53763771 -145866379 - MIR SINE MIR 0 262 55 1826 128 36 20 chr5 53763826 53764132 -145866018 + L1MA3 LINE L1 5994 6304 -1 2162 87 18 0 chr5 53764205 53764531 -145865619 + AluY SINE Alu 1 331 0 902 178 6 12 chr5 53764661 53764830 -145865320 + AluJo SINE Alu 136 303 -9 279 221 183 19 chr5 53765320 53765424 -145864726 - MIR SINE MIR -6 256 136 1909 143 6 34 chr5 53765675 53765854 -145864296 - AluJb SINE Alu 0 312 144 2265 108 3 0 chr5 53765854 53766151 -145863999 - AluSx SINE Alu -14 298 1 1909 143 6 34 chr5 53766151 53766292 -145863858 - AluJb SINE Alu -168 144 1 537 241 61 80 chr5 53766541 53766753 -145863397 + MIR SINE MIR 37 244 -18 2164 111 13 7 chr5 53767448 53767755 -145862395 - AluSq SINE Alu -4 309 1 355 112 6 0 chr5 53768750 53768816 -145861334 + Alu SINE Alu 1 53 -248 338 149 189 27 chr5 53768813 53768887 -145861263 - MER6A DNA MER2_type -519 86 1 * 190 259 17 17 chr5 53769025 53769083 -145861067 - MER5A DNA MER1_type -1 188 131 1821 132 45 3 chr5 53769089 53769376 -145860774 + AluSg SINE Alu 1 299 -11 1560 164 16 42 chr5 53769725 53770035 -145860115 + AluJb SINE Alu 1 302 -10 713 324 39 54 chr5 53770649 53771115 -145859035 - L2 LINE L2 -756 2558 2100 536 262 183 62 chr5 53771242 53771860 -145858290 - L2 LINE L2 -896 2418 1726 351 282 163 14 chr5 53772163 53772372 -145857778 + MIR SINE MIR 8 247 -15 21 0 0 0 chr5 53772911 53772932 -145857218 + AT_rich Low_complexity Low_complexity 1 21 0 1290 209 55 0 chr5 53773627 53773880 -145856270 - AluJo SINE Alu -45 267 1 2119 102 0 40 chr5 53773966 53774269 -145855881 + AluSx SINE Alu 1 291 -21 180 0 0 0 chr5 53774794 53774814 -145855336 + (TG)n Simple_repeat Simple_repeat 2 21 0 2249 123 7 0 chr5 53774961 53775337 -145854813 - AluSx SINE Alu 0 378 1 1355 102 15 20 chr5 53775373 53775569 -145854581 - AluSq SINE Alu -4 309 115 2436 49 3 20 chr5 53775569 53775874 -145854276 + AluY SINE Alu 12 311 0 321 226 9 61 chr5 53775913 53776028 -145854122 - L1ME4a LINE L1 -69 6052 5944 293 250 73 0 chr5 53776118 53776214 -145853936 - L1ME4a LINE L1 -303 5818 5716 634 216 78 54 chr5 53776576 53776818 -145853332 - MIR SINE MIR -10 252 2 759 229 17 87 chr5 53776992 53777307 -145852843 - L1ME1 LINE L1 -26 6140 5845 311 293 61 0 chr5 53778914 53779013 -145851137 + MIR SINE MIR 74 178 -84 * 459 284 37 6 chr5 53779012 53779174 -145850976 - L2 LINE L2 -5 3308 3142 2041 151 0 3 chr5 53779369 53779668 -145850482 + AluSx SINE Alu 1 298 -14 274 296 278 12 chr5 53779825 53779994 -145850156 + MIR SINE MIR 49 262 0 255 351 18 9 chr5 53780146 53780257 -145849893 + L2 LINE L2 2194 2305 -1009 457 263 136 30 chr5 53781246 53781441 -145848709 - L1M4 LINE L1 -2845 3301 3128 2025 127 0 0 chr5 53781441 53781747 -145848403 - AluSx SINE Alu 0 311 6 457 263 136 30 chr5 53781747 53781936 -145848214 - L1M4 LINE L1 -3018 3128 2841 852 134 0 8 chr5 53782096 53782215 -145847935 - FLAM_C SINE Alu -15 118 1 1792 179 7 0 chr5 53782426 53782717 -145847433 + AluJb SINE Alu 11 303 -9 1584 129 152 15 chr5 53782982 53783151 -145846999 - AluSx SINE Alu 0 302 157 2070 104 24 0 chr5 53783151 53783438 -145846712 - AluSg1 SINE Alu -15 294 1 1584 129 152 15 chr5 53783438 53783531 -145846619 - AluSx SINE Alu -145 157 4 370 164 55 27 chr5 53783579 53783725 -145846425 + C-rich Low_complexity Low_complexity 5 154 0 203 636 17 6 chr5 53783699 53783872 -145846278 + polypyrimidine Low_complexity Low_complexity 2 176 0 * 1979 112 17 21 chr5 53783876 53784163 -145845987 - AluSx SINE Alu -26 286 1 988 226 0 37 chr5 53784981 53785154 -145844996 - MER3 DNA MER1_type 0 209 44 2363 81 0 3 chr5 53785154 53785450 -145844700 - AluSc SINE Alu -14 295 1 988 226 0 37 chr5 53785450 53785493 -145844657 - MER3 DNA MER1_type -165 44 1 2149 123 3 0 chr5 53785853 53786153 -145843997 + AluSp SINE Alu 1 301 -12 1997 128 7 0 chr5 53786309 53786624 -145843526 - AluSq SINE Alu 0 317 1 23 33 0 0 chr5 53787246 53787276 -145842874 + AT_rich Low_complexity Low_complexity 1 30 0 2423 64 10 0 chr5 53787276 53787574 -145842576 + AluY SINE Alu 1 301 -10 25 31 0 0 chr5 53787649 53787681 -145842469 + AT_rich Low_complexity Low_complexity 1 32 0 187 261 22 0 chr5 53787856 53787902 -145842248 + L2 LINE L2 3214 3260 -12 22 35 0 0 chr5 53787941 53787970 -145842180 + AT_rich Low_complexity Low_complexity 1 29 0 187 288 34 17 chr5 53789080 53789139 -145841011 - L2 LINE L2 0 3313 3254 180 0 0 0 chr5 53789212 53789232 -145840918 + (TG)n Simple_repeat Simple_repeat 2 21 0 289 185 0 0 chr5 53789700 53789754 -145840396 + LTR33A LTR ERVL 87 140 -383 471 227 39 8 chr5 53789870 53789998 -145840152 + LTR33 LTR ERVL 382 513 -8 1775 173 0 30 chr5 53790099 53790400 -145839750 + AluJo SINE Alu 1 292 -20 725 241 78 16 chr5 53790989 53791246 -145838904 - LTR33 LTR ERVL -4 517 245 1976 123 0 11 chr5 53791494 53791815 -145838335 + AluSx SINE Alu 1 318 0 214 132 26 0 chr5 53792241 53792279 -145837871 - L2 LINE L2 -73 3199 3161 2165 87 6 35 chr5 53792501 53792812 -145837338 - AluSq SINE Alu -11 302 1 194 275 110 11 chr5 53793064 53793155 -145836995 - L2 LINE L2 -362 2910 2811 1491 184 13 49 chr5 53793592 53793753 -145836397 - AluJo SINE Alu -16 296 150 2259 96 24 0 chr5 53793753 53794045 -145836105 - AluY SINE Alu -12 299 1 1491 184 13 49 chr5 53794045 53794187 -145835963 - AluJo SINE Alu -162 150 4 1805 174 13 19 chr5 53794309 53794620 -145835530 - AluJo SINE Alu -3 309 1 534 294 123 5 chr5 53794761 53794965 -145835185 + MIR SINE MIR 30 257 -5 258 181 0 64 chr5 53795275 53795338 -145834812 - L1MD2 LINE L1 -84 6082 6026 2072 147 0 0 chr5 53795765 53796065 -145834085 - AluSx SINE Alu -2 310 11 290 241 106 78 chr5 53796904 53797045 -145833105 - MIR3 SINE MIR -7 201 57 2490 84 3 0 chr5 53797201 53797511 -145832639 + AluSp SINE Alu 1 311 -2 1586 157 0 20 chr5 53798447 53798695 -145831455 - AluSp SINE Alu -25 288 46 910 119 0 0 chr5 53798696 53798814 -145831336 - AluSq SINE Alu -105 208 91 28 0 0 0 chr5 53798843 53798871 -145831279 + AT_rich Low_complexity Low_complexity 1 28 0 2293 121 0 0 chr5 53798977 53799283 -145830867 - AluSx SINE Alu -2 310 5 21 71 0 0 chr5 53799358 53799400 -145830750 + AT_rich Low_complexity Low_complexity 1 42 0 518 169 0 0 chr5 53799558 53799647 -145830503 - AluSx SINE Alu -10 299 211 1168 73 7 7 chr5 53799654 53799804 -145830346 - AluSx SINE Alu -162 150 1 24 67 0 0 chr5 53799943 53799988 -145830162 + AT_rich Low_complexity Low_complexity 1 45 0 2359 89 0 0 chr5 53800726 53801018 -145829132 - AluSg SINE Alu -18 292 1 2263 123 0 3 chr5 53801039 53801348 -145828802 - AluSx SINE Alu -4 308 1 384 291 107 54 chr5 53801361 53801897 -145828253 + L1ME4a LINE L1 5282 5888 -233 1096 255 119 78 chr5 53802369 53803035 -145827115 - MER21B LTR ERV1 -150 713 21 21 0 0 0 chr5 53803125 53803146 -145827004 + AT_rich Low_complexity Low_complexity 1 21 0 1404 150 162 71 chr5 53803231 53803651 -145826499 - MER31B LTR ERV1 -8 458 1 2164 127 7 3 chr5 53803963 53804262 -145825888 - AluSx SINE Alu -12 300 1 24 53 0 0 chr5 53804460 53804498 -145825652 + AT_rich Low_complexity Low_complexity 1 38 0 237 296 222 0 chr5 53805122 53805203 -145824947 + L2 LINE L2 3153 3251 -21 264 30 0 0 chr5 53805424 53805457 -145824693 + (TG)n Simple_repeat Simple_repeat 2 34 0 368 234 23 17 chr5 53805457 53805632 -145824518 + (TA)n Simple_repeat Simple_repeat 2 177 0 189 0 0 0 chr5 53805635 53805656 -145824494 + (TAAAAA)n Simple_repeat Simple_repeat 6 26 0 295 217 64 0 chr5 53806240 53806337 -145823813 + L1M4 LINE L1 5782 5885 -279 2825 168 47 19 chr5 53806749 53807370 -145822780 + L1MB8 LINE L1 5541 6178 0 410 242 91 32 chr5 53807655 53807841 -145822309 + L1ME LINE L1 5576 5772 -349 2267 116 0 7 chr5 53808324 53808627 -145821523 + AluSq SINE Alu 1 301 -12 21 36 0 0 chr5 53808664 53808692 -145821458 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 53809352 53809373 -145820777 + AT_rich Low_complexity Low_complexity 1 21 0 1195 150 0 0 chr5 53809642 53809815 -145820335 - AluSg/x SINE Alu -1 309 137 2041 164 3 0 chr5 53809958 53810269 -145819881 + AluSx SINE Alu 1 312 0 1758 141 0 112 chr5 53811334 53811674 -145818476 + AluJo SINE Alu 1 302 -10 865 228 23 0 chr5 53812548 53812719 -145817431 + FAM SINE Alu 1 175 0 2384 107 0 0 chr5 53813354 53813664 -145816486 + AluSx SINE Alu 1 310 -2 1403 158 27 65 chr5 53813686 53813978 -145816172 + AluJo SINE Alu 5 285 -27 30 0 0 0 chr5 53813999 53814029 -145816121 + AT_rich Low_complexity Low_complexity 1 30 0 296 279 70 0 chr5 53814231 53814317 -145815833 + L2 LINE L2 3153 3244 -28 573 204 19 0 chr5 53814870 53815027 -145815123 + CT-rich Low_complexity Low_complexity 1 160 0 2028 133 17 0 chr5 53815028 53815330 -145814820 - AluSg SINE Alu -3 307 1 1563 180 11 25 chr5 53815530 53815814 -145814336 - AluJo SINE Alu -32 280 1 264 324 58 61 chr5 53815979 53816151 -145813999 - L2 LINE L2 -1228 2086 1914 2256 111 0 0 chr5 53816151 53816448 -145813702 + AluSg SINE Alu 1 297 -13 264 324 58 61 chr5 53816448 53816618 -145813532 - L2 LINE L2 -1400 1914 1745 2167 107 0 19 chr5 53818127 53818445 -145811705 - AluSx SINE Alu 0 312 1 2204 114 0 3 chr5 53818833 53819131 -145811019 - AluSq SINE Alu -16 297 1 26 0 0 0 chr5 53820082 53820108 -145810042 + AT_rich Low_complexity Low_complexity 1 26 0 939 130 0 29 chr5 53820109 53820247 -145809903 - AluJo SINE Alu -178 134 1 738 179 104 6 chr5 53820248 53820421 -145809729 - MER58A DNA MER1_type -34 190 1 2293 110 3 0 chr5 53820918 53821228 -145808922 - AluY SINE Alu 0 311 1 1287 238 76 21 chr5 53821234 53821750 -145808400 - L1MEc LINE L1 -948 5267 4724 2401 224 109 7 chr5 53821762 53822626 -145807524 - L1MEc LINE L1 -1539 4676 3725 318 137 164 0 chr5 53822637 53822710 -145807440 - L1MEc LINE L1 -2583 3632 3548 1715 147 10 41 chr5 53822723 53823015 -145807135 - AluJb SINE Alu -29 283 1 30 69 0 0 chr5 53823015 53823073 -145807077 + AT_rich Low_complexity Low_complexity 1 58 0 835 224 0 0 chr5 53823073 53823229 -145806921 - AluJo SINE Alu -30 282 127 943 272 26 24 chr5 53823229 53823685 -145806465 - L1MEc LINE L1 -2639 3576 3120 2194 125 87 17 chr5 53823734 53824149 -145806001 - Tigger2 DNA MER2_type -1 2717 2274 401 182 0 0 chr5 53824141 53824207 -145805943 - Tigger2 DNA MER2_type -2650 68 3 * 1619 248 89 43 chr5 53824207 53825002 -145805148 - L1MEc LINE L1 -3217 2998 2190 2282 122 3 0 chr5 53825002 53825313 -145804837 - AluSx SINE Alu 0 312 1 1619 248 89 43 chr5 53825313 53825472 -145804678 - L1MEc LINE L1 -4025 2190 2040 23 0 0 0 chr5 53825473 53825496 -145804654 + AT_rich Low_complexity Low_complexity 1 23 0 235 310 9 62 chr5 53825664 53825777 -145804373 - MIR SINE MIR -60 202 96 2320 74 0 0 chr5 53826015 53826300 -145803850 - AluSg SINE Alu -15 295 11 25 51 0 0 chr5 53826437 53826476 -145803674 + AT_rich Low_complexity Low_complexity 1 39 0 2194 113 0 0 chr5 53826739 53827039 -145803111 - AluSg SINE Alu -10 300 1 700 225 44 28 chr5 53827981 53828163 -145801987 - MER5A DNA MER1_type -3 186 2 1515 138 3 110 chr5 53828296 53828614 -145801536 - AluJb SINE Alu -28 284 1 2067 138 0 3 chr5 53829964 53830261 -145799889 - AluSx SINE Alu -16 296 1 2399 154 46 7 chr5 53831375 53831785 -145798365 - MSTB LTR MaLR 0 426 1 2335 85 0 3 chr5 53832069 53832362 -145797788 + AluSg SINE Alu 12 303 -7 840 141 27 54 chr5 53832627 53832776 -145797374 - AluJo SINE Alu -162 150 6 24 53 0 0 chr5 53833933 53833971 -145796179 + AT_rich Low_complexity Low_complexity 1 38 0 1923 133 29 0 chr5 53834835 53835144 -145795006 - MER2 DNA MER2_type -25 320 3 2320 97 7 0 chr5 53835171 53835469 -145794681 + AluSx SINE Alu 1 300 -12 285 222 79 30 chr5 53835521 53835622 -145794528 - L1ME LINE L1 -461 5660 5561 304 165 0 0 chr5 53836052 53836113 -145794037 + Alu SINE Alu 243 294 -8 661 290 164 23 chr5 53837127 53837816 -145792334 + L1MEd LINE L1 466 1251 -4868 276 316 39 22 chr5 53837896 53838074 -145792076 + L1MEd LINE L1 1371 1568 -922 2359 107 0 0 chr5 53838074 53838383 -145791767 + AluSx SINE Alu 1 309 -3 276 316 39 22 chr5 53838383 53838425 -145791725 + L1MEd LINE L1 1568 1608 -882 2155 90 4 0 chr5 53838871 53839149 -145791001 + AluSx SINE Alu 1 279 -33 252 0 0 0 chr5 53839149 53839177 -145790973 + (CA)n Simple_repeat Simple_repeat 1 28 0 2191 108 3 0 chr5 53839540 53839836 -145790314 + AluSx SINE Alu 1 297 -15 219 220 0 0 chr5 53840678 53840728 -145789422 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 2273 82 0 3 chr5 53841256 53841549 -145788601 - AluSc SINE Alu -17 292 1 1443 227 60 24 chr5 53844374 53844793 -145785357 - MER57B LTR ERV1 0 434 1 2452 57 0 0 chr5 53845005 53845301 -145784849 - AluY SINE Alu -15 296 1 271 180 19 0 chr5 53846390 53846454 -145783696 - MER58 DNA MER1_type -15 2405 262 1253 197 104 15 chr5 53846764 53847099 -145783051 - MLT1A1 LTR MaLR 0 365 1 2241 101 60 17 chr5 53847339 53847686 -145782464 - THE1B LTR MaLR -2 362 1 1177 109 0 0 chr5 53847884 53848040 -145782110 - AluSg/x SINE Alu -7 303 148 9887 167 67 30 chr5 53848602 53849771 -145780379 - L1M1 LINE L1 -729 6276 5151 2188 98 27 14 chr5 53849771 53850066 -145780084 - AluSx SINE Alu -13 299 1 9887 167 67 30 chr5 53850066 53850128 -145780022 - L1M1 LINE L1 -1854 5151 5093 1986 119 14 0 chr5 53850128 53850413 -145779737 + AluY SINE Alu 5 293 -18 9887 167 67 30 chr5 53850413 53850571 -145779579 - L1M1 LINE L1 -1912 5093 4942 1612 161 9 56 chr5 53850571 53850894 -145779256 - AluJo SINE Alu -4 308 1 9887 167 67 30 chr5 53850894 53851678 -145778472 - L1M1 LINE L1 -2063 4942 3980 1449 179 28 41 chr5 53851678 53851968 -145778182 + AluJo SINE Alu 1 286 -26 9887 167 67 30 chr5 53851968 53852478 -145777672 - L1M1 LINE L1 -3025 3980 3490 9546 166 153 19 chr5 53852471 53854670 -145775480 - L1M1 LINE L1 -4353 2496 2 * 2125 94 0 4 chr5 53855823 53856100 -145774050 + AluSq SINE Alu 1 276 -37 1643 188 3 29 chr5 53857199 53857508 -145772642 + AluJo SINE Alu 1 301 -11 2211 83 6 46 chr5 53859460 53859786 -145770364 + AluSp SINE Alu 1 313 0 782 265 160 32 chr5 53860171 53860742 -145769408 + L2 LINE L2 2556 3313 0 26 0 0 0 chr5 53861863 53861889 -145768261 + AT_rich Low_complexity Low_complexity 1 26 0 286 169 28 0 chr5 53862914 53862985 -145767165 - L1MB3 LINE L1 0 6183 6111 1512 170 74 17 chr5 53863033 53863386 -145766764 - L1MB7 LINE L1 -19 6165 5793 313 42 62 0 chr5 53863410 53863458 -145766692 - MADE1 DNA Mariner -29 51 1 233 100 200 0 chr5 53863458 53863498 -145766652 - L1MB7 LINE L1 -384 5787 5740 205 308 209 0 chr5 53863766 53863857 -145766293 + L2 LINE L2 3163 3272 0 1929 159 0 3 chr5 53864763 53865059 -145765091 + AluJb SINE Alu 1 295 -17 2499 71 0 0 chr5 53865648 53865956 -145764194 - AluY SINE Alu -3 308 1 231 114 0 0 chr5 53865972 53866016 -145764134 + (A)n Simple_repeat Simple_repeat 1 44 0 298 264 200 16 chr5 53866532 53866657 -145763493 + MIR SINE MIR 88 235 -27 23 68 0 0 chr5 53868501 53868545 -145761605 + AT_rich Low_complexity Low_complexity 1 44 0 871 163 10 74 chr5 53868545 53868748 -145761402 - L1PA15 LINE L1 -9 6156 5967 2253 103 0 3 chr5 53868959 53869260 -145760890 + AluSx SINE Alu 1 300 -12 186 364 26 0 chr5 53870325 53870402 -145759748 + MIR SINE MIR 71 149 -113 2333 72 14 0 chr5 53870560 53870850 -145759300 - AluSg SINE Alu -13 297 4 678 319 110 19 chr5 53871210 53871520 -145758630 + L2 LINE L2 2963 3300 -13 22 0 0 0 chr5 53871558 53871580 -145758570 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 53872538 53872566 -145757584 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 53873472 53873494 -145756656 + AT_rich Low_complexity Low_complexity 1 22 0 557 160 107 24 chr5 53873658 53873827 -145756323 - Looper DNA T2_type 0 1558 1376 866 159 8 0 chr5 53873854 53873986 -145756164 - FLAM_C SINE Alu -10 133 1 2560 181 78 103 chr5 53873986 53874678 -145755472 - Looper DNA T2_type -166 1392 466 1637 162 44 4 chr5 53874678 53874985 -145755165 + AluJb SINE Alu 1 318 0 2560 181 78 103 chr5 53874985 53875414 -145754736 - Looper DNA T2_type -1092 466 28 1542 211 3 14 chr5 53875847 53876141 -145754009 + AluJb SINE Alu 2 292 -20 240 337 11 0 chr5 53876588 53876677 -145753473 + Charlie8 DNA MER1_type 173 262 -2155 225 349 30 0 chr5 53876866 53876932 -145753218 - Charlie8 DNA MER1_type -2346 71 4 306 148 37 0 chr5 53877026 53877080 -145753070 + MLT1G LTR MaLR 7 62 -533 409 217 126 14 chr5 53877122 53877265 -145752885 - MER3 DNA MER1_type -44 165 7 645 252 90 71 chr5 53877270 53877764 -145752386 + MLT1G LTR MaLR 38 567 0 23 54 0 0 chr5 53877906 53877943 -145752207 + AT_rich Low_complexity Low_complexity 1 37 0 616 142 28 0 chr5 53878152 53878258 -145751892 + AluSg/x SINE Alu 192 300 -12 1981 102 53 36 chr5 53878806 53879109 -145751041 + AluSc SINE Alu 1 308 -1 825 267 57 24 chr5 53879780 53880027 -145750123 - MIR SINE MIR -6 256 2 256 329 24 0 chr5 53880033 53880115 -145750035 - MIR SINE MIR -176 86 3 432 143 10 10 chr5 53880409 53880507 -145749643 + Charlie5 DNA MER1_type 2445 2542 -70 553 133 112 0 chr5 53880574 53880672 -145749478 - MER2 DNA MER2_type 0 345 237 1863 160 0 22 chr5 53880673 53880985 -145749165 - AluJb SINE Alu -5 307 3 22 35 0 0 chr5 53881001 53881030 -145749120 + AT_rich Low_complexity Low_complexity 1 29 0 468 51 0 0 chr5 53881030 53881089 -145749061 + (CA)n Simple_repeat Simple_repeat 2 60 0 2779 191 21 76 chr5 53882221 53882577 -145747573 + L1MB7 LINE L1 5456 5751 -433 2109 117 0 0 chr5 53882577 53882860 -145747290 + AluSx SINE Alu 1 283 -29 2779 191 21 76 chr5 53882860 53883253 -145746897 + L1MB7 LINE L1 5751 6164 -20 252 286 103 11 chr5 53883939 53884114 -145746036 - L1ME LINE L1 -332 5789 5599 2595 58 0 0 chr5 53884125 53884433 -145745717 + AluY SINE Alu 1 308 -3 1504 184 0 73 chr5 53885648 53885964 -145744186 - AluJo SINE Alu -14 298 6 233 246 0 0 chr5 53887221 53887279 -145742871 + MIR SINE MIR 64 121 -87 628 249 109 37 chr5 53887431 53887752 -145742398 - L1MC4 LINE L1 -146 7896 7553 * 1503 225 90 50 chr5 53887739 53888472 -145741678 - L1MC4 LINE L1 -5 8037 7157 2205 116 0 0 chr5 53888472 53888784 -145741366 - AluSx SINE Alu 0 312 1 1503 225 90 50 chr5 53888784 53888806 -145741344 - L1MC4 LINE L1 -885 7157 7137 2229 112 0 0 chr5 53888863 53889157 -145740993 - AluSx SINE Alu -18 294 1 1685 176 69 9 chr5 53889198 53889516 -145740634 + MER1B DNA MER1_type 1 337 0 4449 218 32 20 chr5 53890548 53891343 -145738807 + L1M4 LINE L1 6 817 -5725 1867 172 7 0 chr5 53891343 53891645 -145738505 - AluSx SINE Alu -8 304 1 4449 218 32 20 chr5 53891645 53891859 -145738291 + L1M4 LINE L1 817 1027 -5515 3212 167 63 4 chr5 53891859 53892415 -145737735 - LTR39 LTR ERV1 0 783 195 1871 156 0 20 chr5 53892454 53892749 -145737401 - AluJb SINE Alu -23 289 1 904 156 6 11 chr5 53892812 53892992 -145737158 + L1M4 LINE L1 1027 1205 -5337 2182 120 0 0 chr5 53893507 53893806 -145736344 + AluSc SINE Alu 1 299 -10 33 43 0 0 chr5 53894044 53894091 -145736059 + AT_rich Low_complexity Low_complexity 1 47 0 272 229 83 31 chr5 53894533 53894629 -145735521 + MER117 DNA MER1_type 95 195 -2 1130 153 31 31 chr5 53895149 53895377 -145734773 - Tigger5 DNA MER2_type 0 2323 2096 26 0 0 0 chr5 53896487 53896513 -145733637 + AT_rich Low_complexity Low_complexity 1 26 0 2430 278 71 27 chr5 53898171 53899027 -145731123 + L1M4b LINE L1 37 930 -5929 2490 226 60 61 chr5 53899050 53899839 -145730311 + L1M4b LINE L1 1123 1911 -5227 1877 182 0 3 chr5 53899839 53900146 -145730004 + AluJo SINE Alu 3 308 -4 2490 226 60 61 chr5 53900146 53900833 -145729317 + L1M4b LINE L1 1911 2725 -4413 2239 109 0 16 chr5 53900974 53901285 -145728865 + AluSx SINE Alu 1 306 -6 270 193 0 0 chr5 53901552 53901609 -145728541 + (TA)n Simple_repeat Simple_repeat 2 58 0 3629 227 130 62 chr5 53901636 53903475 -145726675 + L1M4b LINE L1 2870 4801 -2156 602 212 27 7 chr5 53903514 53903660 -145726490 + L1MB8 LINE L1 6030 6178 0 2364 76 3 19 chr5 53903668 53903984 -145726166 + AluY SINE Alu 1 311 0 342 0 0 0 chr5 53904296 53904334 -145725816 + (TG)n Simple_repeat Simple_repeat 2 39 0 1183 90 0 0 chr5 53904423 53904568 -145725582 + AluSq/x SINE Alu 1 145 -168 1022 216 38 93 chr5 53905714 53906052 -145724098 - MER39 LTR ERV1 -202 505 179 715 138 103 87 chr5 53906032 53906227 -145723923 - MER21A LTR ERV1 -733 198 1 * 1116 219 59 105 chr5 53906315 53906561 -145723589 - MER21A-int LTR ERV1 -65 4126 3870 2403 70 7 0 chr5 53906561 53906860 -145723290 - AluY SINE Alu -10 301 1 1116 219 59 105 chr5 53906860 53906884 -145723266 - MER21A-int LTR ERV1 -321 3870 3846 1783 110 0 4 chr5 53906884 53907120 -145723030 - AluSx SINE Alu -77 235 1 1116 219 59 105 chr5 53907120 53907304 -145722846 - MER21A-int LTR ERV1 -345 3846 3692 * 5736 49 11 0 chr5 53907299 53907998 -145722152 + HERVK11 LTR ERVK 7247 7953 0 8882 47 1 1 chr5 53907998 53909069 -145721081 + MER11C LTR ERVK 1 1071 0 830 249 36 18 chr5 53909072 53909293 -145720857 - MER21A-int LTR ERV1 -508 3683 3459 1716 171 7 13 chr5 53909318 53909616 -145720534 + AluJo SINE Alu 1 296 -16 198 0 0 0 chr5 53909621 53909643 -145720507 + (TA)n Simple_repeat Simple_repeat 1 22 0 1861 143 29 0 chr5 53909647 53909926 -145720224 - AluSx SINE Alu -24 288 2 1270 234 54 113 chr5 53909927 53910775 -145719375 - MER21A LTR ERV1 -21 879 187 246 81 0 0 chr5 53910776 53910813 -145719337 + (TAAAAA)n Simple_repeat Simple_repeat 4 40 0 337 253 21 53 chr5 53910865 53910960 -145719190 - MER21A LTR ERV1 -807 124 33 462 18 0 0 chr5 53910960 53911015 -145719135 + (CA)n Simple_repeat Simple_repeat 2 56 0 887 211 114 0 chr5 53911019 53911256 -145718894 - L1M4 LINE L1 -982 5164 4901 363 258 48 40 chr5 53911341 53911465 -145718685 + MIR SINE MIR 114 238 -24 283 220 140 10 chr5 53912651 53912751 -145717399 - MIR SINE MIR -37 225 113 338 212 100 61 chr5 53913536 53913685 -145716465 - LTR23 LTR ERV1 0 444 312 2260 102 6 16 chr5 53913685 53913999 -145716151 + AluSp SINE Alu 1 311 -2 338 212 100 61 chr5 53913999 53914104 -145716046 - LTR23 LTR ERV1 -132 312 213 * 376 239 7 51 chr5 53914100 53914238 -145715912 - LTR56 LTR ERV1 -309 136 5 49 18 0 0 chr5 53914757 53914813 -145715337 + AT_rich Low_complexity Low_complexity 1 56 0 854 176 159 0 chr5 53915141 53915311 -145714839 + AluJb SINE Alu 99 295 -17 243 191 32 16 chr5 53915366 53915429 -145714721 + L1ME4a LINE L1 5766 5829 -292 2149 104 7 7 chr5 53915442 53915740 -145714410 - AluSx SINE Alu -14 298 1 292 181 75 105 chr5 53915930 53916063 -145714087 + L1ME4a LINE L1 5981 6109 -12 2263 92 0 3 chr5 53916408 53916703 -145713447 - AluSc SINE Alu -15 294 1 294 275 29 0 chr5 53917389 53917458 -145712692 + MLT1I LTR MaLR 14 84 -325 1136 199 5 9 chr5 53917470 53917681 -145712469 - AluJo SINE Alu -82 230 21 2233 93 14 0 chr5 53917901 53918192 -145711958 - AluY SINE Alu -14 297 3 386 277 11 0 chr5 53918879 53918973 -145711177 - MER94 DNA DNA -24 110 16 229 265 0 15 chr5 53919184 53919252 -145710898 + L2 LINE L2 2566 2632 -682 341 250 156 12 chr5 53919997 53920157 -145709993 - MIR SINE MIR -3 259 77 2266 119 0 0 chr5 53921247 53921557 -145708593 + AluSx SINE Alu 1 310 -2 1894 140 3 53 chr5 53921681 53922003 -145708147 + AluJb SINE Alu 7 312 0 838 134 0 15 chr5 53922015 53922149 -145708001 + AluJo/FLAM SINE Alu 1 132 -170 1579 88 0 15 chr5 53922150 53922355 -145707795 + AluSq SINE Alu 1 202 -111 21 0 0 0 chr5 53922398 53922419 -145707731 + AT_rich Low_complexity Low_complexity 1 21 0 560 303 78 0 chr5 53922870 53923012 -145707138 + MIR SINE MIR 2 154 -108 3622 163 29 29 chr5 53923250 53923981 -145706169 + L1MB8 LINE L1 5448 6178 0 600 99 0 0 chr5 53925771 53925852 -145704298 - AluY SINE Alu -229 82 2 1803 161 0 0 chr5 53930205 53930479 -145699671 - AluJo SINE Alu -30 282 9 28 29 0 0 chr5 53930889 53930924 -145699226 + AT_rich Low_complexity Low_complexity 1 35 0 867 111 56 0 chr5 53931729 53931855 -145698295 + AluSx SINE Alu 1 133 -180 290 0 80 0 chr5 53931855 53931905 -145698245 + A-rich Low_complexity Low_complexity 1 54 0 956 139 126 0 chr5 53931914 53932065 -145698085 + AluSx SINE Alu 129 298 -14 2070 119 17 0 chr5 53932363 53932657 -145697493 - AluSp SINE Alu -14 299 1 733 256 30 6 chr5 53933702 53933870 -145696280 + MER5B DNA MER1_type 7 178 0 1875 162 0 7 chr5 53934419 53934722 -145695428 + AluJb SINE Alu 1 301 -11 244 278 89 0 chr5 53934892 53934982 -145695168 - MIR SINE MIR -52 210 113 1401 200 62 32 chr5 53935481 53935820 -145694330 + MSTD LTR MaLR 6 354 -42 2200 117 28 31 chr5 53935820 53936180 -145693970 + THE1B LTR MaLR 1 359 -5 324 70 0 0 chr5 53936180 53936223 -145693927 + MSTD LTR MaLR 415 457 0 181 298 0 21 chr5 53936224 53936271 -145693879 + MIR SINE MIR 60 105 -157 1704 180 96 18 chr5 53936910 53937449 -145692701 + L1MB7 LINE L1 4971 5530 -654 2759 154 60 72 chr5 53937587 53937941 -145692209 + L1MB7 LINE L1 5505 5849 -335 2060 133 3 3 chr5 53937941 53938243 -145691907 + AluSx SINE Alu 1 302 -10 2759 154 60 72 chr5 53938243 53938557 -145691593 + L1MB7 LINE L1 5849 6165 -19 427 335 6 28 chr5 53940150 53940326 -145689824 - MER5A DNA MER1_type 0 189 18 1358 157 74 87 chr5 53941701 53942013 -145688137 + AluJb SINE Alu 1 308 -4 2319 92 0 3 chr5 53943026 53943332 -145686818 + AluY SINE Alu 1 305 -6 379 183 75 25 chr5 53944640 53944760 -145685390 + L1ME1 LINE L1 1331 1456 -5403 738 277 99 34 chr5 53944761 53944816 -145685334 + L1ME1 LINE L1 1588 1638 -5319 2070 151 0 3 chr5 53944816 53945127 -145685023 + AluSx SINE Alu 1 310 -2 738 277 99 34 chr5 53945127 53945722 -145684428 + L1ME1 LINE L1 1638 2245 -4712 434 253 130 77 chr5 53945767 53946198 -145683952 + L1ME1 LINE L1 2548 3001 -4137 * 455 210 183 38 chr5 53946185 53946447 -145683703 + L1ME1 LINE L1 3561 3860 -3097 1767 171 24 0 chr5 53946464 53946581 -145683569 + AluJb SINE Alu 2 115 -197 197 33 33 0 chr5 53946581 53946611 -145683539 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1767 171 24 0 chr5 53946611 53946785 -145683365 + AluJb SINE Alu 115 300 -12 719 244 85 0 chr5 53946829 53947075 -145683075 + L1ME1 LINE L1 4289 4555 -2402 678 256 0 35 chr5 53947108 53947280 -145682870 - MER8 DNA MER2_type -73 166 1 3811 230 98 27 chr5 53947280 53949134 -145681016 + L1ME1 LINE L1 4557 6536 -441 371 287 99 20 chr5 53949118 53949320 -145680830 + L1ME1 LINE L1 6755 6972 -5 * 2738 162 76 13 chr5 53949569 53950095 -145680055 - L1MB5 LINE L1 -10 6164 5606 559 113 0 12 chr5 53950165 53950245 -145679905 - L1M4 LINE L1 -535 5643 5565 684 154 70 19 chr5 53950812 53950968 -145679182 + L1MC4a LINE L1 961 1124 -5483 1316 212 124 33 chr5 53951079 53951442 -145678708 + MSTD LTR MaLR 1 396 0 366 214 359 15 chr5 53951698 53951829 -145678321 - MER5A DNA MER1_type -5 184 9 3492 252 72 26 chr5 53951921 53953304 -145676846 + L1MEc LINE L1 17 1462 -4934 613 191 52 148 chr5 53953299 53953546 -145676604 + L1MC4a LINE L1 1068 1260 -5347 * 1579 171 18 7 chr5 53953546 53953820 -145676330 + AluJo SINE Alu 15 291 -21 613 191 52 148 chr5 53953820 53953991 -145676159 + L1MC4a LINE L1 1260 1446 -5161 485 261 76 17 chr5 53954040 53954390 -145675760 + L1MC4a LINE L1 1399 1881 -4545 1289 165 12 40 chr5 53954434 53954682 -145675468 + AluJo SINE Alu 1 241 -71 808 215 85 94 chr5 53954682 53955022 -145675128 + L1MC4a LINE L1 4158 4494 -1932 329 292 83 14 chr5 53955465 53955609 -145674541 - MIR SINE MIR 0 262 109 21 0 0 0 chr5 53955914 53955935 -145674215 + AT_rich Low_complexity Low_complexity 1 21 0 4376 74 13 3 chr5 53956612 53957210 -145672940 + L1PA7 LINE L1 5551 6154 0 2358 105 0 9 chr5 53957478 53957793 -145672357 - AluSx SINE Alu 0 312 1 1766 128 29 32 chr5 53957954 53958258 -145671892 + L1PA16 LINE L1 5824 6128 -38 1994 125 12 56 chr5 53958258 53958578 -145671572 + AluSx SINE Alu 1 306 -6 295 257 29 86 chr5 53959021 53959161 -145670989 - MIR SINE MIR -43 219 88 2474 80 0 3 chr5 53959162 53959473 -145670677 + AluSg SINE Alu 1 310 0 213 315 79 11 chr5 53959490 53959579 -145670571 - MIR SINE MIR -156 106 12 1768 148 17 10 chr5 53960188 53960479 -145669671 + AluJb SINE Alu 1 293 -19 2001 145 10 0 chr5 53962000 53962304 -145667846 + AluSx SINE Alu 1 307 -5 259 299 61 7 chr5 53962312 53962459 -145667691 + L1MC4a LINE L1 5198 5352 -1074 535 205 11 8 chr5 53962491 53962634 -145667516 + L1MC4a LINE L1 5562 5708 -736 1834 201 57 11 chr5 53962644 53963101 -145667049 - Charlie1 DNA MER1_type 0 2761 2284 458 230 243 21 chr5 53963133 53963372 -145666778 + L1ME3A LINE L1 5851 6142 -28 2322 77 10 10 chr5 53963391 53963688 -145666462 + AluY SINE Alu 1 297 -14 404 256 131 36 chr5 53963826 53963963 -145666187 + MIR3 SINE MIR 54 203 -5 1340 176 99 95 chr5 53964514 53964998 -145665152 + L1MC4 LINE L1 7557 8042 0 10483 176 19 10 chr5 53965130 53967990 -145662160 - L1PA14 LINE L1 -3 6158 3271 268 157 0 0 chr5 53968080 53968131 -145662019 - FLAM_A SINE Alu -81 51 1 23 0 0 0 chr5 53968375 53968398 -145661752 + AT_rich Low_complexity Low_complexity 1 23 0 329 237 132 0 chr5 53968697 53968811 -145661339 + L1MC4a LINE L1 5689 5817 -2271 389 125 0 0 chr5 53968813 53968869 -145661281 - MLT1D LTR MaLR 0 505 450 2090 158 47 3 chr5 53968870 53969192 -145660958 + MER1B DNA MER1_type 4 339 0 1486 244 37 39 chr5 53969192 53969650 -145660500 - MLT1D LTR MaLR -48 457 1 1240 279 183 32 chr5 53969650 53970450 -145659700 + L1MC4a LINE L1 5815 6493 -1595 1727 166 7 13 chr5 53970450 53970752 -145659398 - AluJb SINE Alu -12 300 1 1240 279 183 32 chr5 53970752 53971132 -145659018 + L1MC4a LINE L1 6493 7173 -915 740 196 90 0 chr5 53971165 53971354 -145658796 + L1ME1 LINE L1 5733 5938 -226 354 200 50 0 chr5 53971371 53971451 -145658699 + L1ME1 LINE L1 5987 6070 -96 814 243 57 20 chr5 53971575 53971855 -145658295 + L1MC4a LINE L1 7252 7508 -629 1271 192 45 0 chr5 53972001 53972288 -145657862 - MER33 DNA MER1_type -24 300 1 541 223 68 81 chr5 53972303 53972626 -145657524 + L1MC5 LINE L1 7346 7664 -297 237 235 250 0 chr5 53972633 53972769 -145657381 + L1MC5 LINE L1 7716 7885 -76 1466 200 7 17 chr5 53972826 53973116 -145657034 + AluJo SINE Alu 1 287 -25 2161 107 10 0 chr5 53973280 53973579 -145656571 - AluSx SINE Alu -10 302 1 454 253 84 7 chr5 53975200 53975354 -145654796 - MIR SINE MIR -4 258 93 188 231 200 0 chr5 53975436 53975501 -145654649 - L2 LINE L2 -2 3311 3234 211 154 51 0 chr5 53976035 53976074 -145654076 + CT-rich Low_complexity Low_complexity 1 41 0 390 285 63 131 chr5 53977219 53977707 -145652443 - L2 LINE L2 -8 3264 2810 221 321 36 0 chr5 53978115 53978199 -145651951 + L2 LINE L2 2325 2411 -903 185 335 61 41 chr5 53978258 53978455 -145651695 + L2 LINE L2 2606 2806 -508 450 265 80 40 chr5 53979235 53979308 -145650842 - L2 LINE L2 -215 3098 3029 2306 59 48 3 chr5 53979308 53979598 -145650552 + AluY SINE Alu 1 303 -8 450 265 80 40 chr5 53979598 53979724 -145650426 - L2 LINE L2 -284 3029 2891 209 116 0 23 chr5 53979737 53979780 -145650370 + (TTTTC)n Simple_repeat Simple_repeat 3 44 0 290 359 43 0 chr5 53980160 53980277 -145649873 - L2 LINE L2 -343 2971 2850 194 317 0 0 chr5 53980335 53980395 -145649755 - L2 LINE L2 -573 2741 2682 270 203 58 14 chr5 53980503 53980572 -145649578 + L2 LINE L2 3160 3231 -82 1159 120 141 5 chr5 53981295 53981487 -145648663 - AluJb SINE Alu -10 302 85 2539 74 3 0 chr5 53982165 53982476 -145647674 - AluSp SINE Alu -1 312 1 1463 158 113 91 chr5 53982495 53982697 -145647453 + Charlie1b DNA MER1_type 1 197 -2564 1485 201 28 55 chr5 53982697 53983094 -145647056 + MLT1B LTR MaLR 1 386 -4 1463 158 113 91 chr5 53983094 53983223 -145646927 + Charlie1b DNA MER1_type 197 322 -2439 2108 123 3 0 chr5 53983223 53983516 -145646634 - AluSx SINE Alu -18 294 1 1463 158 113 91 chr5 53983516 53983533 -145646617 + Charlie1b DNA MER1_type 322 337 -2424 1713 147 32 42 chr5 53983533 53983818 -145646332 - AluJo SINE Alu -30 282 1 1463 158 113 91 chr5 53983818 53983973 -145646177 + Charlie1b DNA MER1_type 337 517 -6 904 173 65 128 chr5 53984070 53984470 -145645680 + MLT1B LTR MaLR 11 385 -5 2903 6 0 0 chr5 53984845 53985159 -145644991 - AluYb8 SINE Alu -4 314 1 234 317 19 9 chr5 53986172 53986246 -145643904 - MER5A DNA MER1_type -73 116 30 21 0 0 0 chr5 53986453 53986474 -145643676 + AT_rich Low_complexity Low_complexity 1 21 0 494 258 118 34 chr5 53986844 53987039 -145643111 - MIR SINE MIR -15 247 39 562 275 47 10 chr5 53987081 53987274 -145642876 + L1ME4a LINE L1 5682 5881 -240 236 280 93 27 chr5 53987291 53987441 -145642709 + L1ME4a LINE L1 5962 6121 0 459 224 276 9 chr5 53988681 53988959 -145641191 - MLT1H LTR MaLR -17 532 203 2214 81 3 19 chr5 53989208 53989515 -145640635 - AluY SINE Alu -9 302 1 456 275 126 12 chr5 53989916 53990083 -145640067 + MIR SINE MIR 77 262 0 277 164 15 15 chr5 53990284 53990351 -145639799 + L1ME4a LINE L1 5220 5286 -860 1564 177 42 53 chr5 53990377 53990738 -145639412 + L1ME4a LINE L1 5407 5763 -403 308 261 68 90 chr5 53990741 53990975 -145639175 + L1ME4a LINE L1 5887 6115 -6 4895 136 14 10 chr5 53991574 53992381 -145637769 + L1MB3 LINE L1 5345 6154 -29 2239 110 0 0 chr5 53992884 53993175 -145636975 - AluSx SINE Alu -21 291 1 342 250 45 45 chr5 53993342 53993498 -145636652 - L1ME LINE L1 -385 5736 5581 1214 230 117 0 chr5 53993806 53994106 -145636044 - MER58B DNA MER1_type -2 339 5 27 0 0 0 chr5 53994216 53994243 -145635907 + AT_rich Low_complexity Low_complexity 1 27 0 25 31 0 0 chr5 53994412 53994444 -145635706 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr5 53995237 53995262 -145634888 + AT_rich Low_complexity Low_complexity 1 25 0 213 135 22 101 chr5 53995451 53995540 -145634610 + (TATAG)n Simple_repeat Simple_repeat 3 84 0 2095 117 27 0 chr5 53995639 53995939 -145634211 - AluSq SINE Alu -5 308 1 2077 126 30 0 chr5 53995939 53996241 -145633909 - AluSx SINE Alu -1 311 1 2104 118 3 0 chr5 53996459 53996748 -145633402 - AluSx SINE Alu -22 290 1 251 326 157 19 chr5 53996770 53997031 -145633119 - L2 LINE L2 -70 3243 2947 578 201 250 6 chr5 53997058 53997222 -145632928 + MER3 DNA MER1_type 1 204 -5 194 356 40 10 chr5 53997222 53997323 -145632827 - L2 LINE L2 -393 2921 2818 2367 77 3 3 chr5 53997636 53997935 -145632215 - AluY SINE Alu -12 299 1 1104 157 71 25 chr5 53998878 53999076 -145631074 - AluJo SINE Alu -20 292 86 670 261 82 10 chr5 53999642 53999837 -145630313 - MIR SINE MIR 0 262 54 2338 107 0 0 chr5 54001822 54002122 -145628028 + AluSq SINE Alu 1 300 -13 21 71 0 0 chr5 54002229 54002271 -145627879 + AT_rich Low_complexity Low_complexity 1 42 0 188 132 0 26 chr5 54002752 54002790 -145627360 + (TG)n Simple_repeat Simple_repeat 2 38 0 206 170 0 21 chr5 54002827 54002874 -145627276 + (TG)n Simple_repeat Simple_repeat 2 47 0 1984 125 54 60 chr5 54002896 54003265 -145626885 - LTR26 LTR ERV1 -236 367 1 1475 165 3 71 chr5 54004036 54004160 -145625990 + AluJb SINE Alu 1 132 -180 260 70 23 0 chr5 54004160 54004203 -145625947 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1475 165 3 71 chr5 54004203 54004400 -145625750 + AluJb SINE Alu 132 300 -12 710 332 79 53 chr5 54004412 54005056 -145625094 + L2 LINE L2 2207 2867 -447 194 360 101 0 chr5 54005301 54005390 -145624760 + L2 LINE L2 3139 3236 -36 * 600 271 124 5 chr5 54005380 54005590 -145624560 - MIR SINE MIR -19 243 9 2197 122 0 0 chr5 54005980 54006275 -145623875 - AluSx SINE Alu -8 304 10 185 32 0 65 chr5 54008086 54008117 -145622033 + (TAGA)n Simple_repeat Simple_repeat 3 31 0 477 62 0 0 chr5 54008117 54008182 -145621968 + (CATA)n Simple_repeat Simple_repeat 4 68 0 1544 170 24 24 chr5 54009499 54009788 -145620362 - AluJo SINE Alu -15 297 9 2212 116 3 3 chr5 54009802 54010103 -145620047 - AluSx SINE Alu -11 301 1 224 245 0 0 chr5 54011014 54011063 -145619087 - MIR SINE MIR -116 92 44 2228 81 0 42 chr5 54011149 54011457 -145618693 - AluSq SINE Alu -18 295 1 23 54 0 0 chr5 54012080 54012117 -145618033 + AT_rich Low_complexity Low_complexity 1 37 0 212 167 61 106 chr5 54012192 54012258 -145617892 + MIR SINE MIR 90 152 -110 2115 114 17 7 chr5 54012261 54012559 -145617591 - AluSx SINE Alu -11 301 1 1246 190 9 0 chr5 54013717 54013933 -145616217 + MER20 DNA MER1_type 2 219 0 1582 111 9 0 chr5 54014643 54014860 -145615290 - AluSg/x SINE Alu -9 301 83 32 26 0 0 chr5 54014865 54014904 -145615246 + AT_rich Low_complexity Low_complexity 1 39 0 1234 139 4 48 chr5 54015262 54015492 -145614658 + AluJo SINE Alu 87 306 -6 29 78 0 0 chr5 54015908 54015972 -145614178 + AT_rich Low_complexity Low_complexity 1 64 0 25 0 0 0 chr5 54016563 54016588 -145613562 + AT_rich Low_complexity Low_complexity 1 25 0 287 236 0 0 chr5 54016834 54016889 -145613261 + L2 LINE L2 3251 3305 -8 1585 174 50 14 chr5 54017002 54017284 -145612866 + AluJo SINE Alu 13 304 -8 1967 78 4 0 chr5 54017355 54017600 -145612550 + AluSp SINE Alu 60 305 -8 2319 99 3 0 chr5 54017611 54017915 -145612235 + AluSg1 SINE Alu 3 307 -2 1081 198 162 60 chr5 54017964 54018526 -145611624 - L1MC5 LINE L1 -44 7917 7299 1605 198 63 123 chr5 54018671 54019437 -145610713 - L1MC5 LINE L1 -531 7430 6711 844 139 0 16 chr5 54019763 54019892 -145610258 - FLAM_C SINE Alu -6 127 1 402 305 58 40 chr5 54022757 54022980 -145607170 - MIR SINE MIR -24 238 12 488 132 66 44 chr5 54023252 54023388 -145606762 + L1MB8 LINE L1 6040 6178 0 2321 82 0 3 chr5 54023400 54023693 -145606457 + AluSg SINE Alu 1 292 -18 2239 96 3 10 chr5 54024174 54024477 -145605673 + AluSq SINE Alu 1 301 -12 23 0 0 0 chr5 54024763 54024786 -145605364 + AT_rich Low_complexity Low_complexity 1 23 0 726 213 0 0 chr5 54024786 54024908 -145605242 + FLAM_A SINE Alu 1 122 -11 234 260 0 0 chr5 54024908 54024958 -145605192 + (TATG)n Simple_repeat Simple_repeat 1 50 0 287 159 8 10 chr5 54025078 54025330 -145604820 + AluJo SINE Alu 1 299 -3 265 323 63 16 chr5 54025367 54025494 -145604656 + MER5B DNA MER1_type 1 133 -45 439 233 157 0 chr5 54025572 54025731 -145604419 - L1MC5 LINE L1 -518 7443 7260 1004 164 12 12 chr5 54026342 54026507 -145603643 + FRAM SINE Alu 1 165 -1 21 0 0 0 chr5 54028372 54028393 -145601757 + AT_rich Low_complexity Low_complexity 1 21 0 616 158 53 53 chr5 54028652 54028785 -145601365 - MIR SINE MIR -64 198 66 609 285 275 9 chr5 54028971 54029555 -145600595 + L2 LINE L2 2561 3312 -1 738 257 142 11 chr5 54029720 54030157 -145599993 - MER68 LTR ERV1 -4 558 3 2316 92 3 0 chr5 54031060 54031354 -145598796 + AluSx SINE Alu 1 295 -17 359 209 262 70 chr5 54031436 54031608 -145598542 - MIR SINE MIR -17 245 41 1548 167 106 137 chr5 54031616 54032202 -145597948 - LTR49 LTR ERV1 -4 591 24 1515 208 7 10 chr5 54032207 54032496 -145597654 + AluJb SINE Alu 7 294 -18 789 185 15 0 chr5 54032542 54032677 -145597473 + Tigger5 DNA MER2_type 4 140 -2183 363 206 0 0 chr5 54032676 54032739 -145597411 + Tigger5 DNA MER2_type 2257 2319 -4 * 637 201 86 86 chr5 54032746 54032955 -145597195 + L1M4 LINE L1 4808 5016 -1130 1875 168 0 3 chr5 54032955 54033253 -145596897 + AluJb SINE Alu 1 297 -15 831 144 39 0 chr5 54033281 54033434 -145596716 + L1M4 LINE L1 5004 5162 -984 1813 174 77 5 chr5 54033443 54033822 -145596328 + L1MA9 LINE L1 5903 6308 -4 21 0 0 0 chr5 54033823 54033844 -145596306 + AT_rich Low_complexity Low_complexity 1 21 0 257 156 0 0 chr5 54033844 54033889 -145596261 + L1M4 LINE L1 5157 5201 -945 231 189 0 0 chr5 54033890 54033921 -145596229 + Alu SINE Alu 1 31 -268 4144 61 13 2 chr5 54033921 54034445 -145595705 - MER41A LTR ERV1 0 554 25 2099 122 0 22 chr5 54034445 54034756 -145595394 + AluSx SINE Alu 9 312 0 678 144 36 7 chr5 54034759 54034898 -145595252 + L1M4 LINE L1 5188 5330 -816 * 3571 176 60 11 chr5 54034894 54035710 -145594440 + L1 LINE L1 3963 4818 -1328 474 313 158 8 chr5 54036676 54036922 -145593228 + L2 LINE L2 3030 3312 -1 515 261 87 6 chr5 54037634 54037795 -145592355 + MIR SINE MIR 1 174 -88 810 272 229 3 chr5 54037878 54038253 -145591897 + L2 LINE L2 2804 3263 -50 2231 131 48 62 chr5 54038269 54038703 -145591447 - MSTA LTR MaLR 0 428 1 614 257 134 75 chr5 54039054 54039176 -145590974 - L1MC4a LINE L1 -1834 5974 5861 1907 156 0 7 chr5 54039176 54039477 -145590673 + AluSx SINE Alu 7 305 -7 614 257 134 75 chr5 54039477 54039794 -145590356 - L1MC4a LINE L1 -1947 5861 5509 324 256 139 8 chr5 54039844 54039973 -145590177 - L1MC4a LINE L1 -2408 5400 5255 269 32 0 0 chr5 54039978 54040009 -145590141 + U2 snRNA snRNA 1 31 -157 2371 98 0 0 chr5 54040098 54040395 -145589755 - AluSc SINE Alu -12 297 1 1573 108 95 54 chr5 54041157 54041453 -145588697 + AluJb SINE Alu 1 308 -4 640 264 70 15 chr5 54041720 54041921 -145588229 - MIR SINE MIR -49 213 2 1423 254 38 16 chr5 54042980 54043264 -145586886 + L2 LINE L2 2198 2495 -819 1723 152 35 28 chr5 54043264 54043553 -145586597 - AluJo SINE Alu -21 291 1 1423 254 38 16 chr5 54043553 54043693 -145586457 + L2 LINE L2 2495 2631 -683 2480 78 3 0 chr5 54043800 54044108 -145586042 - AluSg1 SINE Alu 0 309 1 270 146 0 0 chr5 54044123 54044164 -145585986 - Charlie5 DNA MER1_type 0 2623 2583 1292 138 18 37 chr5 54044164 54044381 -145585769 - AluJo SINE Alu -17 295 83 287 135 0 115 chr5 54044382 54044411 -145585739 - Charlie5 DNA MER1_type -35 2589 2558 2014 144 10 0 chr5 54044411 54044703 -145585447 - AluSx SINE Alu -17 295 1 287 135 0 115 chr5 54044703 54044769 -145585381 - Charlie5 DNA MER1_type -66 2558 2505 1529 218 33 15 chr5 54044837 54045232 -145584918 + L2 LINE L2 2911 3312 -1 325 239 165 0 chr5 54046016 54046125 -145584025 + L2 LINE L2 2569 2695 -619 1883 180 3 0 chr5 54046131 54046442 -145583708 - AluJb SINE Alu 0 312 1 457 115 81 0 chr5 54046560 54046647 -145583503 - MER53 DNA DNA 0 189 96 412 191 66 52 chr5 54046653 54046789 -145583361 - MER53 DNA DNA -48 141 4 243 213 100 12 chr5 54046850 54046930 -145583220 + L2 LINE L2 3137 3223 -49 2137 111 3 0 chr5 54047117 54047414 -145582736 + AluSx SINE Alu 1 298 -14 264 254 109 9 chr5 54047533 54047643 -145582507 - MIR SINE MIR -108 154 34 2362 99 0 0 chr5 54047674 54047968 -145582182 + AluSc SINE Alu 1 294 -15 2301 81 17 3 chr5 54047973 54048268 -145581882 + AluSp SINE Alu 1 299 -14 2185 111 0 23 chr5 54048565 54048872 -145581278 - AluSx SINE Alu -12 300 1 216 233 35 40 chr5 54050939 54051057 -145579093 - MIR SINE MIR -62 146 35 274 182 36 0 chr5 54051061 54051116 -145579034 + MIR SINE MIR 87 143 -119 367 287 147 0 chr5 54053260 54053389 -145576761 - MIR SINE MIR -16 246 99 292 270 112 62 chr5 54053860 54053940 -145576210 + MIR SINE MIR 63 138 -124 2637 56 0 0 chr5 54053940 54054245 -145575905 + AluY SINE Alu 1 305 -6 292 270 112 62 chr5 54054245 54054342 -145575808 + MIR SINE MIR 138 249 -13 22 56 0 0 chr5 54056459 54056495 -145573655 + GC_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 54056803 54056825 -145573325 + GC_rich Low_complexity Low_complexity 1 22 0 1918 161 3 28 chr5 54058698 54059015 -145571135 - AluJb SINE Alu -3 309 1 296 169 15 0 chr5 54060753 54060818 -145569332 - L1PB4 LINE L1 0 6156 6091 37 0 0 21 chr5 54061955 54061980 -145568170 + AT_rich Low_complexity Low_complexity 1 26 -21 2327 110 3 0 chr5 54061980 54062289 -145567861 - AluSx SINE Alu -2 310 1 37 0 0 21 chr5 54062289 54062311 -145567839 + AT_rich Low_complexity Low_complexity 26 47 0 307 161 16 0 chr5 54062312 54062374 -145567776 - L1PB4 LINE L1 -3 6153 6091 358 252 74 22 chr5 54062398 54062533 -145567617 - MIR SINE MIR -8 254 113 198 0 0 0 chr5 54064380 54064402 -145565748 + (T)n Simple_repeat Simple_repeat 1 22 0 294 216 98 39 chr5 54065369 54065522 -145564628 - L2 LINE L2 0 3313 3152 357 250 25 0 chr5 54065577 54065657 -145564493 + MER21B LTR ERV1 12 93 -770 523 179 0 47 chr5 54065658 54065764 -145564386 - FLAM_C SINE Alu -36 107 7 2641 217 60 40 chr5 54065767 54065862 -145564288 + MER21B LTR ERV1 84 176 -687 1792 121 23 62 chr5 54065862 54066169 -145563981 + AluSx SINE Alu 1 295 -17 2641 217 60 40 chr5 54066169 54066777 -145563373 + MER21B LTR ERV1 176 801 -62 364 245 138 16 chr5 54066899 54067087 -145563063 - L2 LINE L2 -42 3271 3061 2216 119 3 0 chr5 54067148 54067451 -145562699 + AluSq SINE Alu 1 304 -9 947 179 50 0 chr5 54067528 54067707 -145562443 - MER5A DNA MER1_type -1 188 1 2060 125 0 16 chr5 54067751 54068055 -145562095 + AluSx SINE Alu 1 299 -13 1942 102 0 0 chr5 54068161 54068415 -145561735 - AluSq SINE Alu -3 310 57 2029 95 10 51 chr5 54068664 54069018 -145561132 + AluSx SINE Alu 1 342 0 318 282 70 99 chr5 54069584 54069784 -145560366 - MLT1L LTR MaLR -125 490 299 2464 74 7 3 chr5 54069784 54070093 -145560057 - AluSg SINE Alu 0 310 1 318 282 70 99 chr5 54070093 54070165 -145559985 - MLT1L LTR MaLR -316 299 226 268 261 14 58 chr5 54070647 54070785 -145559365 - L1ME4a LINE L1 -12 6109 5978 1578 239 47 19 chr5 54070818 54071245 -145558905 - MLT1E2 LTR MaLR 0 626 188 908 150 0 0 chr5 54071674 54071807 -145558343 - AluSq/x SINE Alu -179 133 1 2330 106 0 0 chr5 54071817 54072118 -145558032 - AluSx SINE Alu -11 301 1 586 165 6 112 chr5 54073075 54073245 -145556905 - L1MB8 LINE L1 -1 6177 6026 1363 171 71 8 chr5 54073265 54073504 -145556646 + AluJo SINE Alu 21 274 -38 207 0 0 0 chr5 54073504 54073527 -145556623 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 441 81 0 0 chr5 54073529 54073591 -145556559 + (GAAA)n Simple_repeat Simple_repeat 1 62 0 1929 174 8 14 chr5 54073591 54073632 -145556518 - L1MB8 LINE L1 -140 6038 5998 4093 200 37 47 chr5 54073632 54073975 -145556175 - L1MC3 LINE L1 -530 5717 5372 428 0 0 19 chr5 54073975 54074028 -145556122 + (TA)n Simple_repeat Simple_repeat 2 53 0 4093 200 37 47 chr5 54074028 54074779 -145555371 - L1MC3 LINE L1 -875 5372 5033 2443 88 0 0 chr5 54074779 54075074 -145555076 - AluSx SINE Alu -17 295 1 4093 200 37 47 chr5 54075074 54075885 -145554265 - L1MC3 LINE L1 -1214 5033 4215 224 119 0 24 chr5 54075891 54075933 -145554217 + (TTC)n Simple_repeat Simple_repeat 2 42 0 1268 192 44 33 chr5 54075933 54076293 -145553857 - L1MC3 LINE L1 -1948 4267 3904 528 105 35 12 chr5 54076685 54076771 -145553379 - LTR9 LTR ERV1 -115 497 410 2644 160 22 4 chr5 54076783 54077240 -145552910 - HUERS-P3 LTR ERV1 -8454 465 1 1303 98 6 0 chr5 54077240 54077414 -145552736 - LTR9 LTR ERV1 0 612 438 6319 177 31 39 chr5 54077495 54077933 -145552217 - L1MC1 LINE L1 -5 6397 5957 1034 63 6 19 chr5 54077933 54078092 -145552058 + (TTC)n Simple_repeat Simple_repeat 1 157 0 2069 110 14 0 chr5 54078094 54078376 -145551774 - AluSq SINE Alu -26 287 2 6319 177 31 39 chr5 54078376 54079117 -145551033 - L1MC1 LINE L1 -446 5956 5211 2051 115 47 0 chr5 54079117 54079396 -145550754 - AluSx SINE Alu -19 293 2 6319 177 31 39 chr5 54079396 54079797 -145550353 - L1MC1 LINE L1 -1191 5211 4808 2126 134 0 7 chr5 54079797 54080103 -145550047 - AluSx SINE Alu -8 304 1 6319 177 31 39 chr5 54080103 54080709 -145549441 - L1MC1 LINE L1 -1594 4808 4232 3602 132 58 58 chr5 54080697 54081015 -145549135 - L1MA9 LINE L1 -364 5948 5632 * 1434 6 6 11 chr5 54081015 54081192 -145548958 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 1819 113 7 39 chr5 54081193 54081475 -145548675 - AluSg SINE Alu -37 273 1 3602 132 58 58 chr5 54081475 54081545 -145548605 - L1MA9 LINE L1 -680 5632 5564 2505 56 0 10 chr5 54081545 54081849 -145548301 - AluY SINE Alu -10 301 1 3602 132 58 58 chr5 54081849 54082567 -145547583 - L1MA9 LINE L1 -748 5564 4843 945 234 33 7 chr5 54082569 54082843 -145547307 - L1MC1 LINE L1 -3964 2432 2152 1446 207 26 36 chr5 54082845 54082999 -145547151 - AluJo SINE Alu -6 306 155 207 0 0 0 chr5 54082999 54083022 -145547128 + (CCA)n Simple_repeat Simple_repeat 1 23 0 1446 207 26 36 chr5 54083022 54083176 -145546974 - AluJo SINE Alu -157 155 1 964 253 134 8 chr5 54083179 54083575 -145546575 - L1MC3 LINE L1 -3481 2734 2289 1247 176 100 8 chr5 54083583 54083833 -145546317 - AluJo SINE Alu -17 295 23 895 252 49 47 chr5 54083834 54084263 -145545887 - L1MC3 LINE L1 -4079 2317 1888 781 194 181 14 chr5 54084276 54084492 -145545658 + L1M4 LINE L1 3949 4200 -1946 599 241 0 8 chr5 54084573 54084706 -145545444 - FLAM_C SINE Alu 0 133 2 2713 157 117 76 chr5 54084947 54085659 -145544491 - L1MC3 LINE L1 -1 7784 7044 194 289 105 0 chr5 54085948 54086024 -145544126 - MIR SINE MIR -62 146 63 2197 109 3 20 chr5 54086690 54086994 -145543156 - AluSx SINE Alu -13 299 1 2324 100 3 0 chr5 54087182 54087482 -145542668 - AluSg SINE Alu -9 301 1 1883 164 0 3 chr5 54087666 54087964 -145542186 + AluJb SINE Alu 5 301 -11 807 151 0 0 chr5 54088759 54088878 -145541272 - FRAM SINE Alu -20 156 38 710 150 0 25 chr5 54089365 54089485 -145540665 + AluJb SINE Alu 177 293 -19 2126 121 7 0 chr5 54089712 54090010 -145540140 - AluSx SINE Alu -12 300 1 808 200 34 6 chr5 54090990 54091165 -145538985 + L1ME3 LINE L1 5982 6161 -1 1190 199 93 72 chr5 54091627 54092015 -145538135 - MSTD LTR MaLR 0 396 1 4311 171 34 3 chr5 54092015 54092780 -145537370 + L1MB8 LINE L1 5390 6178 0 510 243 47 0 chr5 54092847 54092995 -145537155 + MIR SINE MIR 13 167 -95 2173 113 7 3 chr5 54093561 54093863 -145536287 + AluSq SINE Alu 1 303 -10 339 96 0 0 chr5 54094091 54094143 -145536007 + (TA)n Simple_repeat Simple_repeat 1 52 0 318 290 130 0 chr5 54094176 54094307 -145535843 - L1ME4a LINE L1 -232 5889 5742 220 292 0 0 chr5 54094512 54094560 -145535590 + L3b LINE CR1 1192 1239 -344 280 111 37 0 chr5 54095541 54095595 -145534555 + CT-rich Low_complexity Low_complexity 2 57 0 1112 186 5 29 chr5 54096090 54096294 -145533856 - AluJo SINE Alu -113 199 1 1350 177 20 10 chr5 54096921 54097221 -145532929 + MER33 DNA MER1_type 17 319 -5 191 309 0 0 chr5 54097276 54097318 -145532832 - L2 LINE L2 -21 3251 3210 698 240 0 0 chr5 54097335 54097464 -145532686 + FRAM SINE Alu 1 129 -47 2588 37 0 0 chr5 54097612 54097910 -145532240 + AluY SINE Alu 1 298 -13 705 234 49 34 chr5 54097917 54098122 -145532028 - MER63A DNA MER1_type -1 209 2 226 359 109 8 chr5 54098305 54098433 -145531717 - L3 LINE CR1 -419 1158 1018 205 289 271 25 chr5 54098475 54098800 -145531350 - L2 LINE L2 -1436 1878 1474 697 89 0 0 chr5 54098854 54098944 -145531206 + 5S rRNA rRNA 1 90 -31 603 319 93 14 chr5 54098969 54099248 -145530902 - L3 LINE CR1 -374 1203 903 2328 99 0 0 chr5 54099263 54099566 -145530584 - AluSc SINE Alu -6 303 1 305 194 14 0 chr5 54099972 54100044 -145530106 + MER93a LTR ERV1 330 402 0 2155 136 43 3 chr5 54100136 54100482 -145529668 + MLT1A1 LTR MaLR 2 361 -4 23 0 0 0 chr5 54100659 54100682 -145529468 + AT_rich Low_complexity Low_complexity 1 23 0 240 215 0 46 chr5 54100764 54100829 -145529321 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 217 49 0 49 chr5 54101412 54101453 -145528697 + (TAAAAA)n Simple_repeat Simple_repeat 4 42 0 1583 191 68 33 chr5 54102542 54102966 -145527184 - L1ME1 LINE L1 -13 6153 5715 2153 132 7 0 chr5 54102997 54103301 -145526849 - AluSx SINE Alu -6 306 1 712 195 60 54 chr5 54103314 54103499 -145526651 - MIR SINE MIR -72 190 5 769 201 98 5 chr5 54103607 54103791 -145526359 + LTR40c LTR ERVL 3 203 -262 369 304 70 9 chr5 54104193 54104308 -145525842 - MIR3 SINE MIR -22 186 65 211 196 0 0 chr5 54104697 54104743 -145525407 - L2 LINE L2 -4 3309 3264 451 325 46 0 chr5 54104876 54105027 -145525123 - MIR SINE MIR -46 216 59 281 351 88 88 chr5 54105206 54105534 -145524616 - L2 LINE L2 -31 3241 2914 2548 49 0 0 chr5 54105669 54105975 -145524175 + AluY SINE Alu 1 306 -5 201 333 33 22 chr5 54106032 54106122 -145524028 + L2 LINE L2 3222 3312 -1 21 36 0 0 chr5 54107337 54107365 -145522785 + GC_rich Low_complexity Low_complexity 1 28 0 2251 203 54 23 chr5 54108227 54108798 -145521352 - L1MC4a LINE L1 0 7808 7220 189 0 0 0 chr5 54109621 54109642 -145520508 + (T)n Simple_repeat Simple_repeat 1 21 0 33 90 0 0 chr5 54110508 54110597 -145519553 + GC_rich Low_complexity Low_complexity 1 89 0 180 0 0 0 chr5 54111116 54111136 -145519014 + (A)n Simple_repeat Simple_repeat 1 20 0 216 313 42 62 chr5 54111835 54111979 -145518171 - L3b LINE CR1 -318 1265 1125 1987 134 0 14 chr5 54111986 54112278 -145517872 + AluJo SINE Alu 6 293 -19 2200 117 3 0 chr5 54112556 54112854 -145517296 - AluSx SINE Alu -13 299 1 2566 43 0 3 chr5 54113752 54114054 -145516096 - AluY SINE Alu -10 301 1 1567 148 8 4 chr5 54114907 54115170 -145514980 - L1PA16 LINE L1 -16 6150 5887 761 175 0 0 chr5 54115892 54116006 -145514144 - AluJb SINE Alu -68 244 131 1688 167 0 14 chr5 54116011 54116304 -145513846 - AluJb SINE Alu -19 293 5 317 228 114 44 chr5 54116355 54116469 -145513681 - MER63 DNA MER1_type -313 749 2 2079 118 3 37 chr5 54116815 54117138 -145513012 - AluSx SINE Alu 0 312 1 417 253 45 21 chr5 54118009 54118161 -145511989 - MIR3 SINE MIR -13 195 38 565 133 0 0 chr5 54119517 54119600 -145510550 + AluSg/x SINE Alu 209 291 -19 2114 120 3 10 chr5 54120078 54120386 -145509764 + AluSq SINE Alu 1 306 -7 482 160 0 0 chr5 54120402 54120477 -145509673 - AluSg/x SINE Alu -133 177 103 741 144 24 16 chr5 54120522 54120647 -145509503 - FLAM_C SINE Alu -7 126 1 826 262 74 16 chr5 54120759 54121003 -145509147 - MIR SINE MIR 0 262 5 2231 108 3 0 chr5 54121475 54121771 -145508379 - AluSx SINE Alu -15 297 1 198 0 0 0 chr5 54121771 54121793 -145508357 + (T)n Simple_repeat Simple_repeat 1 22 0 214 231 39 0 chr5 54121803 54121855 -145508295 + MIR SINE MIR 209 262 0 * 576 242 108 16 chr5 54121828 54122014 -145508136 - MIR SINE MIR -37 225 23 1517 176 39 20 chr5 54124567 54124873 -145505277 + AluJb SINE Alu 1 312 0 498 269 154 0 chr5 54125640 54125796 -145504354 + MER5A DNA MER1_type 6 185 -4 2155 137 0 0 chr5 54126983 54127290 -145502860 - AluSg SINE Alu -3 307 1 2374 114 34 6 chr5 54127566 54127918 -145502232 + THE1B LTR MaLR 3 364 0 202 250 18 0 chr5 54128756 54128812 -145501338 + T-rich Low_complexity Low_complexity 2 58 0 259 174 105 35 chr5 54128921 54129007 -145501143 + MER113 DNA MER1_type? 1 92 -429 23 54 0 0 chr5 54129029 54129066 -145501084 + AT_rich Low_complexity Low_complexity 1 37 0 1347 300 58 70 chr5 54129176 54129341 -145500809 - L3 LINE CR1 -193 1384 1219 1689 166 16 16 chr5 54129341 54129649 -145500501 - AluJb SINE Alu -4 308 1 1347 300 58 70 chr5 54129649 54130307 -145499843 - L3 LINE CR1 -358 1219 571 1970 167 0 0 chr5 54130618 54130929 -145499221 - AluJb SINE Alu -1 311 1 273 242 16 0 chr5 54131231 54131293 -145498857 - MER91 DNA MER1_type 0 140 78 379 374 11 0 chr5 54131328 54131510 -145498640 + MIR SINE MIR 69 252 -10 1531 206 98 52 chr5 54131568 54132048 -145498102 - MLT1D LTR MaLR -1 504 3 217 342 36 9 chr5 54132082 54132193 -145497957 - L2 LINE L2 -213 3059 2946 346 269 30 15 chr5 54132552 54132686 -145497464 + Charlie8 DNA MER1_type 24 159 -2258 1914 156 7 3 chr5 54132840 54133148 -145497002 + AluJb SINE Alu 1 309 -3 2953 194 44 35 chr5 54133691 54133723 -145496427 - L1MB5 LINE L1 -8 6166 6136 2317 106 6 6 chr5 54133723 54134034 -145496116 - AluSq SINE Alu -2 311 1 2953 194 44 35 chr5 54134034 54134752 -145495398 - L1MB5 LINE L1 -38 6136 5409 696 271 74 13 chr5 54134904 54135133 -145495017 + MIR SINE MIR 17 259 -3 1696 169 58 3 chr5 54135159 54135454 -145494696 - AluJb SINE Alu -1 311 1 598 241 145 35 chr5 54135465 54135806 -145494344 - L1MC/D LINE L1 -473 5648 5270 496 246 26 9 chr5 54135959 54136073 -145494077 + MIR3 SINE MIR 88 203 -5 270 253 41 7 chr5 54136250 54136396 -145493754 + (TA)n Simple_repeat Simple_repeat 2 152 0 211 171 48 0 chr5 54136439 54136544 -145493606 + (TA)n Simple_repeat Simple_repeat 1 110 0 272 186 47 15 chr5 54136568 54136833 -145493317 + (TA)n Simple_repeat Simple_repeat 1 273 0 21 57 0 0 chr5 54136851 54136886 -145493264 + AT_rich Low_complexity Low_complexity 1 35 0 641 193 180 60 chr5 54137421 54137721 -145492429 - MER57A LTR ERV1 -4 399 64 207 204 0 0 chr5 54137815 54137859 -145492291 + (TA)n Simple_repeat Simple_repeat 2 45 0 191 275 22 7 chr5 54137985 54138123 -145492027 + GA-rich Low_complexity Low_complexity 1 140 0 192 125 0 0 chr5 54138080 54138112 -145492038 + (GGA)n Simple_repeat Simple_repeat 2 33 0 21 36 0 0 chr5 54138761 54138789 -145491361 + AT_rich Low_complexity Low_complexity 1 28 0 978 173 126 0 chr5 54141877 54142068 -145488082 + MER20 DNA MER1_type 5 219 0 2304 143 152 80 chr5 54142219 54142792 -145487358 + LTR18B LTR ERVL 1 614 0 26 0 0 0 chr5 54143600 54143626 -145486524 + AT_rich Low_complexity Low_complexity 1 26 0 514 264 136 44 chr5 54143701 54143834 -145486316 - HAL1 LINE L1 -106 2401 2282 1721 121 4 12 chr5 54143834 54144083 -145486067 - AluSx SINE Alu -47 265 19 514 264 136 44 chr5 54144083 54144495 -145485655 - HAL1 LINE L1 -225 2282 1806 1350 246 105 31 chr5 54144536 54145234 -145484916 - HAL1 LINE L1 -856 1651 903 2007 120 7 0 chr5 54145389 54145663 -145484487 + AluSx SINE Alu 6 281 -31 423 333 136 58 chr5 54145711 54146174 -145483976 - HAL1 LINE L1 -1996 511 13 2228 112 37 0 chr5 54146643 54146939 -145483211 - AluSx SINE Alu -5 307 1 2069 146 3 0 chr5 54147269 54147564 -145482586 - AluSx SINE Alu -13 299 4 24 0 0 0 chr5 54147573 54147597 -145482553 + AT_rich Low_complexity Low_complexity 1 24 0 2290 88 0 14 chr5 54147599 54147894 -145482256 + AluSg SINE Alu 1 291 -19 1543 100 22 26 chr5 54147966 54148196 -145481954 + MER30 DNA MER1_type 1 229 -1 237 65 0 0 chr5 54148563 54148594 -145481556 + (TC)n Simple_repeat Simple_repeat 2 32 0 2816 131 39 0 chr5 54148626 54149093 -145481057 - L1MC1 LINE L1 -7 6326 5842 1549 167 104 0 chr5 54149094 54149364 -145480786 - AluJb SINE Alu -14 298 1 260 182 0 0 chr5 54149758 54149813 -145480337 + L1MC1 LINE L1 5871 5925 -408 194 387 36 9 chr5 54150905 54151016 -145479134 - L2 LINE L2 -218 3054 2941 1120 266 91 55 chr5 54151716 54151764 -145478386 + L2 LINE L2 1696 1741 -1573 2030 118 40 20 chr5 54151764 54152060 -145478090 - AluSx SINE Alu -8 304 3 1120 266 91 55 chr5 54152060 54152462 -145477688 + L2 LINE L2 1741 2162 -1152 583 260 95 57 chr5 54152470 54152676 -145477474 - L1ME LINE L1 -4128 2412 2215 1669 173 0 58 chr5 54152676 54153005 -145477145 - AluJb SINE Alu -2 310 1 583 260 95 57 chr5 54153005 54153397 -145476753 - L1ME LINE L1 -4325 2215 1791 611 225 56 170 chr5 54153426 54154575 -145475575 - L1ME LINE L1 -4994 1536 519 445 215 158 38 chr5 54156204 54156362 -145473788 + MER5B DNA MER1_type 2 178 0 233 206 65 120 chr5 54156972 54157023 -145473127 - MIR3 SINE MIR -3 205 160 588 220 125 0 chr5 54157023 54157191 -145472959 - MER5A DNA MER1_type 0 189 1 233 206 65 120 chr5 54157191 54157231 -145472919 - MIR3 SINE MIR -48 160 119 1758 106 117 25 chr5 54157355 54157629 -145472521 - AluSg SINE Alu -11 299 1 667 261 133 34 chr5 54157822 54158056 -145472094 - MIR SINE MIR 0 262 6 946 289 72 29 chr5 54159218 54159636 -145470514 - MLT1K LTR MaLR -7 581 146 29 47 0 0 chr5 54160427 54160470 -145469680 + AT_rich Low_complexity Low_complexity 1 43 0 854 248 131 83 chr5 54160826 54161391 -145468759 - MLT1F1 LTR MaLR -3 592 1 850 208 0 12 chr5 54161412 54161580 -145468570 + AluJb SINE Alu 137 302 -10 411 297 62 31 chr5 54162389 54162584 -145467566 + L1ME4a LINE L1 5734 5934 -187 21 57 0 0 chr5 54162745 54162780 -145467370 + AT_rich Low_complexity Low_complexity 1 35 0 633 250 56 6 chr5 54164779 54164959 -145465191 - L2 LINE L2 -1 3312 3124 2274 114 0 13 chr5 54165698 54166013 -145464137 - AluSx SINE Alu -1 311 1 422 240 142 31 chr5 54166289 54166514 -145463636 - MER112 DNA MER1_type -3 257 8 1430 166 5 0 chr5 54167184 54167401 -145462749 + AluJb SINE Alu 86 303 -9 808 191 86 0 chr5 54167436 54167588 -145462562 - FAM SINE Alu -8 167 3 21 0 0 0 chr5 54167644 54167665 -145462485 + AT_rich Low_complexity Low_complexity 1 21 0 453 301 15 37 chr5 54167711 54167847 -145462303 + MIR3 SINE MIR 24 156 -52 296 48 24 0 chr5 54167926 54167968 -145462182 + (TG)n Simple_repeat Simple_repeat 1 43 0 900 238 189 23 chr5 54168882 54169315 -145460835 + MLT1D LTR MaLR 1 505 0 279 286 9 76 chr5 54169630 54169735 -145460415 + MIR SINE MIR 102 199 -63 246 351 0 0 chr5 54169811 54169885 -145460265 + CT-rich Low_complexity Low_complexity 3 76 0 246 317 0 0 chr5 54170063 54170123 -145460027 - L2 LINE L2 0 3272 3213 237 313 31 0 chr5 54170470 54170534 -145459616 + MIR SINE MIR 30 95 -113 27 29 0 0 chr5 54171615 54171649 -145458501 + AT_rich Low_complexity Low_complexity 1 34 0 1689 264 77 7 chr5 54171658 54172245 -145457905 - L1ME3 LINE L1 -15 6147 5520 715 208 36 30 chr5 54172437 54172605 -145457545 + MER5B DNA MER1_type 5 173 -5 352 194 40 0 chr5 54172728 54172852 -145457298 + (TA)n Simple_repeat Simple_repeat 1 129 0 24 67 0 0 chr5 54173951 54173996 -145456154 + AT_rich Low_complexity Low_complexity 1 45 0 319 75 0 19 chr5 54176786 54176839 -145453311 + L1MA4 LINE L1 6243 6294 -6 908 124 129 27 chr5 54176876 54177062 -145453088 + MER3 DNA MER1_type 1 205 -4 2221 96 3 3 chr5 54177530 54177921 -145452229 - AluSx SINE Alu 0 391 1 1952 115 0 0 chr5 54179590 54179851 -145450299 - AluSc SINE Alu -13 296 36 744 171 0 0 chr5 54180615 54180732 -145449418 - FLAM_A SINE Alu -16 117 1 295 217 64 0 chr5 54181684 54181781 -145448369 + L1M4 LINE L1 5782 5885 -279 2825 168 47 19 chr5 54182193 54182814 -145447336 + L1MB8 LINE L1 5541 6178 0 410 242 91 32 chr5 54183099 54183285 -145446865 + L1ME LINE L1 5576 5772 -349 2267 116 0 7 chr5 54183779 54184082 -145446068 + AluSq SINE Alu 1 301 -12 21 36 0 0 chr5 54184119 54184147 -145446003 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 54184808 54184829 -145445321 + AT_rich Low_complexity Low_complexity 1 21 0 1195 150 0 0 chr5 54185098 54185271 -145444879 - AluSg/x SINE Alu -1 311 139 2041 164 3 0 chr5 54185414 54185725 -145444425 + AluSx SINE Alu 1 312 0 1758 141 0 112 chr5 54186790 54187130 -145443020 + AluJo SINE Alu 1 302 -10 865 228 23 0 chr5 54188001 54188172 -145441978 + FAM SINE Alu 1 175 0 2384 107 0 0 chr5 54188806 54189116 -145441034 + AluSx SINE Alu 1 310 -2 1403 158 27 65 chr5 54189138 54189430 -145440720 + AluJo SINE Alu 5 285 -27 30 0 0 0 chr5 54189451 54189481 -145440669 + AT_rich Low_complexity Low_complexity 1 30 0 296 279 70 0 chr5 54189683 54189769 -145440381 + L2 LINE L2 3153 3244 -28 573 204 19 0 chr5 54190322 54190479 -145439671 + CT-rich Low_complexity Low_complexity 1 160 0 2028 133 17 0 chr5 54190480 54190782 -145439368 - AluSg SINE Alu -3 307 1 1563 180 11 25 chr5 54190982 54191266 -145438884 - AluJo SINE Alu -32 280 1 264 324 58 61 chr5 54191431 54191603 -145438547 - L2 LINE L2 -1228 2086 1914 2221 111 0 3 chr5 54191603 54191901 -145438249 + AluSg SINE Alu 1 297 -13 264 324 58 61 chr5 54191901 54192071 -145438079 - L2 LINE L2 -1400 1914 1745 2167 107 0 19 chr5 54193580 54193898 -145436252 - AluSx SINE Alu 0 312 1 2204 114 0 3 chr5 54194286 54194584 -145435566 - AluSq SINE Alu -16 297 1 26 0 0 0 chr5 54195535 54195561 -145434589 + AT_rich Low_complexity Low_complexity 1 26 0 939 130 0 29 chr5 54195562 54195700 -145434450 - AluJo SINE Alu -178 134 1 814 179 104 6 chr5 54195701 54195874 -145434276 - MER58A DNA MER1_type -34 190 1 2374 106 0 0 chr5 54196371 54196683 -145433467 - AluSx SINE Alu 0 312 1 266 299 21 41 chr5 54196744 54196841 -145433309 - L2 LINE L2 -48 3265 3171 432 317 107 52 chr5 54196947 54197366 -145432784 - L2 LINE L2 -2684 630 189 1304 91 152 0 chr5 54197444 54197642 -145432508 - MER30 DNA MER1_type 0 230 3 2268 96 0 3 chr5 54197763 54198055 -145432095 + AluSx SINE Alu 6 296 -16 1504 229 96 34 chr5 54198138 54198318 -145431832 - L1MB8 LINE L1 -1 6177 5998 1115 215 197 28 chr5 54198318 54198566 -145431584 - L1MD3 LINE L1 -743 5403 5522 1780 133 33 36 chr5 54198566 54198867 -145431283 + AluSx SINE Alu 1 300 -12 1115 215 197 28 chr5 54198867 54199254 -145430896 - L1MD3 LINE L1 -623 5523 5203 722 161 0 51 chr5 54199255 54199440 -145430710 - FLAM_C SINE Alu 0 183 5 1858 123 94 0 chr5 54199447 54199723 -145430427 - AluSx SINE Alu -10 302 1 3017 63 3 3 chr5 54199738 54200104 -145430046 - L1PA8 LINE L1 -1 6171 5806 2304 104 0 0 chr5 54200104 54200411 -145429739 - AluY SINE Alu -4 307 1 871 133 0 22 chr5 54250581 54250716 -145379434 - FLAM_C SINE Alu -1 132 1 826 274 96 47 chr5 54251255 54251828 -145378322 + L1ME4a LINE L1 5301 5901 -220 2181 99 0 7 chr5 54251925 54252228 -145377922 - AluSp SINE Alu -12 301 1 835 157 0 63 chr5 54252728 54252887 -145377263 - FRAM SINE Alu -18 158 10 715 157 0 0 chr5 54252898 54253013 -145377137 + MLT1A1 LTR MaLR 245 359 -6 2178 104 0 13 chr5 54253028 54253336 -145376814 - AluSx SINE Alu -8 304 1 21 71 0 0 chr5 54253404 54253446 -145376704 + AT_rich Low_complexity Low_complexity 1 42 0 802 141 0 16 chr5 54253446 54253574 -145376576 - FLAM_C SINE Alu -17 126 1 1731 171 13 0 chr5 54253900 54254198 -145375952 - AluSx SINE Alu -10 302 1 1022 146 29 12 chr5 54254198 54254369 -145375781 - MER50-int LTR ERV1 -2420 4785 4612 2087 104 0 13 chr5 54254369 54254668 -145375482 - AluSg SINE Alu -15 295 1 643 97 97 0 chr5 54254668 54254771 -145375379 - AluSg SINE Alu -3 309 197 941 177 0 6 chr5 54254813 54254977 -145375173 - AluSg SINE Alu -90 220 58 764 287 77 7 chr5 54255156 54255428 -145374722 - L1MC4a LINE L1 -1946 5862 5572 21 57 0 0 chr5 54255464 54255499 -145374651 + AT_rich Low_complexity Low_complexity 1 35 0 405 281 25 33 chr5 54255580 54255701 -145374449 - L2 LINE L2 -4 3309 3190 181 163 418 82 chr5 54256775 54256873 -145373277 - MIR SINE MIR -61 147 17 2222 63 40 3 chr5 54257464 54257764 -145372386 + AluY SINE Alu 1 311 0 1446 84 0 0 chr5 54257778 54257969 -145372181 + AluY SINE Alu 118 308 -3 606 177 143 14 chr5 54257976 54258123 -145372027 + MER5A DNA MER1_type 16 181 -8 396 235 58 59 chr5 54258127 54258273 -145371877 + MLT1L LTR MaLR 148 303 -285 360 281 177 12 chr5 54258310 54258474 -145371676 + MLT1L LTR MaLR 418 608 -7 1434 92 72 0 chr5 54258673 54258868 -145371282 - THE1B LTR MaLR 0 364 156 5523 75 20 52 chr5 54258882 54259776 -145370374 + SVA Other Other 1 866 -520 305 269 50 25 chr5 54259912 54260031 -145370119 + L1M4 LINE L1 3073 3194 -2952 525 99 0 0 chr5 54260139 54260210 -145369940 - AluSq/x SINE Alu -178 134 64 267 31 0 0 chr5 54260990 54261022 -145369128 + (CA)n Simple_repeat Simple_repeat 2 33 0 588 213 28 14 chr5 54261155 54261296 -145368854 - MER69 DNA AcHobo -4 2522 2380 289 130 19 56 chr5 54261425 54261479 -145368671 - MER69 DNA AcHobo -2460 66 15 24 0 0 0 chr5 54262848 54262872 -145367278 + AT_rich Low_complexity Low_complexity 1 24 0 2012 91 0 17 chr5 54263235 54263531 -145366619 - AluSx SINE Alu -9 303 13 390 270 27 68 chr5 54263681 54263829 -145366321 + MIR3 SINE MIR 60 201 -7 215 240 20 0 chr5 54263975 54264025 -145366125 - MIR SINE MIR -94 168 118 1068 144 0 16 chr5 54264178 54264366 -145365784 + AluSg/x SINE Alu 123 307 -3 2351 46 0 0 chr5 54265164 54265478 -145364672 - AluY SINE Alu 0 314 1 2115 111 0 7 chr5 54265685 54265983 -145364167 + AluSx SINE Alu 1 296 -16 408 222 121 0 chr5 54266054 54266153 -145363997 + L2 LINE L2 3192 3302 -11 1586 168 111 18 chr5 54266204 54266537 -145363613 - MLT1A1 LTR MaLR -1 364 1 2099 67 39 3 chr5 54266701 54266985 -145363165 + AluSg SINE Alu 1 294 -16 2276 88 3 0 chr5 54267036 54267344 -145362806 + AluSg SINE Alu 1 309 -1 1777 156 10 10 chr5 54268045 54268346 -145361804 + AluJb SINE Alu 1 301 -11 549 299 170 18 chr5 54268441 54268665 -145361485 - MIR SINE MIR -3 259 2 352 126 53 53 chr5 54268702 54268797 -145361353 + MLT1J2 LTR MaLR 24 118 -332 1205 162 60 4 chr5 54268809 54269044 -145361106 - AluJb SINE Alu 0 312 65 236 333 13 0 chr5 54269147 54269222 -145360928 + MLT1J2 LTR MaLR 226 301 -149 1958 143 0 13 chr5 54269307 54269615 -145360535 + AluSq SINE Alu 1 304 -9 840 144 105 0 chr5 54270966 54271119 -145359031 - FRAM SINE Alu -8 168 1 2794 6 0 0 chr5 54271129 54271440 -145358710 - AluYa5 SINE Alu 0 311 1 2076 99 7 10 chr5 54271711 54272004 -145358146 - AluSx SINE Alu -20 292 1 267 111 0 0 chr5 54272032 54272068 -145358082 + Alu SINE Alu 1 36 -264 217 155 138 35 chr5 54272581 54272639 -145357511 - MER5A DNA MER1_type -24 165 102 1622 151 59 0 chr5 54272692 54272964 -145357186 + AluJo SINE Alu 1 288 -24 2245 107 0 0 chr5 54273295 54273605 -145356545 + AluSx SINE Alu 1 310 -2 2146 112 0 10 chr5 54273618 54273921 -145356229 + AluSx SINE Alu 1 300 -12 2174 48 19 63 chr5 54274401 54274717 -145355433 - AluY SINE Alu -9 302 1 1920 137 0 10 chr5 54275897 54276197 -145353953 + AluSx SINE Alu 3 299 -13 257 319 174 50 chr5 54276280 54276570 -145353580 - L2 LINE L2 -2 3270 3018 2289 53 0 26 chr5 54276570 54276874 -145353276 + AluY SINE Alu 1 296 -15 257 319 174 50 chr5 54276874 54277074 -145353076 - L2 LINE L2 -254 3018 2721 1999 130 0 3 chr5 54277319 54277619 -145352531 - AluSx SINE Alu -13 299 1 6018 97 13 17 chr5 54277700 54278190 -145351960 - L1MA4A LINE L1 -25 6278 5791 840 71 0 0 chr5 54278190 54278302 -145351848 + (TA)n Simple_repeat Simple_repeat 1 112 0 6018 97 13 17 chr5 54278302 54278708 -145351442 - L1MA4A LINE L1 -512 5791 5385 2362 72 13 0 chr5 54278708 54279015 -145351135 - AluY SINE Alu 0 311 1 886 87 0 0 chr5 54279015 54279130 -145351020 - AluSg SINE Alu -195 115 1 223 255 234 0 chr5 54279362 54279456 -145350694 + MIR3 SINE MIR 82 197 -11 311 295 116 8 chr5 54279577 54279706 -145350444 + MER115 DNA AcHobo 3 145 -548 1724 206 8 37 chr5 54279721 54280099 -145350051 - MLT1A2 LTR MaLR -7 367 1 2073 94 4 0 chr5 54280132 54280436 -145349714 - AluSc SINE Alu 0 305 1 978 224 56 16 chr5 54280581 54280831 -145349319 + MER115 DNA AcHobo 399 658 -35 939 196 50 86 chr5 54280845 54280964 -145349186 + LTR56 LTR ERV1 1 123 -322 2434 41 0 0 chr5 54280964 54281254 -145348896 - AluY SINE Alu -21 290 1 939 196 50 86 chr5 54281254 54281471 -145348679 + LTR56 LTR ERV1 123 325 -120 2109 105 10 3 chr5 54281482 54281788 -145348362 + AluSq SINE Alu 2 309 -4 393 250 140 0 chr5 54281853 54281953 -145348197 - MIR SINE MIR -143 119 6 458 296 130 31 chr5 54281963 54282186 -145347964 - MIR SINE MIR 0 262 18 2353 51 3 22 chr5 54282627 54282942 -145347208 - AluY SINE Alu 0 311 3 2205 71 0 3 chr5 54283536 54283844 -145346306 + AluY SINE Alu 1 307 0 1580 154 27 17 chr5 54284045 54284343 -145345807 + AluJo SINE Alu 2 302 -10 444 243 104 107 chr5 54284485 54284765 -145345385 - L1MC4 LINE L1 -17 8025 7648 1240 149 5 23 chr5 54284765 54284979 -145345171 + AluJb SINE Alu 85 294 -18 2122 107 17 0 chr5 54285012 54285311 -145344839 + AluJb SINE Alu 1 304 -8 1026 93 0 0 chr5 54285595 54285735 -145344415 - AluSp/q SINE Alu -2 311 172 1945 132 3 0 chr5 54286693 54286981 -145343169 - AluSx SINE Alu -23 289 1 2070 94 17 3 chr5 54287562 54287860 -145342290 + AluSq SINE Alu 1 302 -11 597 325 233 29 chr5 54288527 54289100 -145341050 + L2 LINE L2 1391 1846 -1468 1859 139 10 23 chr5 54289100 54289409 -145340741 + AluJb SINE Alu 1 305 -7 597 325 233 29 chr5 54289409 54289552 -145340598 + L2 LINE L2 1846 1959 -1355 1613 151 3 74 chr5 54289552 54289877 -145340273 - AluJb SINE Alu -4 308 7 597 325 233 29 chr5 54289877 54290120 -145340030 + L2 LINE L2 1959 2547 -767 1107 174 104 14 chr5 54290126 54290338 -145339812 - MER8 DNA MER2_type -1 238 8 2154 82 17 3 chr5 54290391 54290682 -145339468 - AluSx SINE Alu -8 304 10 2015 98 9 28 chr5 54290700 54291018 -145339132 - AluSx SINE Alu 0 312 1 1777 96 0 19 chr5 54291198 54291458 -145338692 - AluSg SINE Alu -53 257 3 296 182 91 81 chr5 54291543 54291606 -145338544 - MER94 DNA DNA -34 100 33 2174 72 7 0 chr5 54291606 54291906 -145338244 - AluSc SINE Alu 0 302 1 296 182 91 81 chr5 54291906 54291940 -145338210 - MER94 DNA DNA -101 33 1 1594 148 44 40 chr5 54292360 54292657 -145337493 + AluJo SINE Alu 1 298 -14 588 337 81 53 chr5 54293310 54293553 -145336597 - L3 LINE CR1 -13 1564 1329 1323 224 125 9 chr5 54293553 54293681 -145336469 + MLT1A2 LTR MaLR 1 113 -261 2250 91 7 0 chr5 54293681 54293978 -145336172 + AluSg SINE Alu 1 299 -11 1323 224 125 9 chr5 54293978 54294184 -145335966 + MLT1A2 LTR MaLR 113 374 0 588 337 81 53 chr5 54294184 54294200 -145335950 - L3 LINE CR1 -248 1329 1315 2128 116 0 3 chr5 54294200 54294511 -145335639 - AluY SINE Alu -1 310 1 588 337 81 53 chr5 54294511 54294590 -145335560 - L3 LINE CR1 -262 1315 1240 1858 96 104 0 chr5 54294590 54294860 -145335290 + AluSq SINE Alu 1 298 -15 588 337 81 53 chr5 54294860 54295175 -145334975 - L3 LINE CR1 -337 1240 891 204 167 0 0 chr5 54295286 54295334 -145334816 + A-rich Low_complexity Low_complexity 1 48 0 372 350 16 8 chr5 54295438 54295561 -145334589 + MIR3 SINE MIR 12 135 -73 185 281 0 53 chr5 54295787 54295844 -145334306 + L3 LINE CR1 1516 1569 -8 526 214 21 148 chr5 54295925 54296084 -145334066 - L2 LINE L2 -10 3303 3184 2216 87 0 0 chr5 54296084 54296373 -145333777 + AluSc SINE Alu 1 289 -20 526 214 21 148 chr5 54296373 54296456 -145333694 - L2 LINE L2 -129 3184 3092 186 283 0 0 chr5 54296765 54296811 -145333339 - L2 LINE L2 -2 3311 3266 198 370 49 25 chr5 54296994 54297156 -145332994 - MIR SINE MIR -71 191 26 700 120 0 0 chr5 54297699 54297799 -145332351 - AluSg/x SINE Alu -19 291 192 1963 132 3 25 chr5 54297830 54298149 -145332001 + AluSx SINE Alu 1 312 0 539 255 43 43 chr5 54298213 54298374 -145331776 - MER5B DNA MER1_type -5 173 13 1132 160 11 0 chr5 54298480 54298667 -145331483 + MER5A DNA MER1_type 1 189 0 1550 166 46 26 chr5 54299272 54299574 -145330576 - AluJb SINE Alu -4 308 1 2122 79 0 23 chr5 54299581 54299885 -145330265 - AluY SINE Alu -14 297 1 24 0 0 0 chr5 54300354 54300378 -145329772 + AT_rich Low_complexity Low_complexity 1 24 0 1816 109 105 151 chr5 54301223 54301324 -145328826 - MSTC LTR MaLR 0 428 324 2685 7 0 0 chr5 54301324 54301622 -145328528 - AluYa5 SINE Alu -13 298 1 1816 109 105 151 chr5 54301622 54301924 -145328226 - MSTC LTR MaLR -104 324 46 2158 110 7 3 chr5 54301924 54302233 -145327917 + AluSq SINE Alu 1 310 -3 1816 109 105 151 chr5 54302233 54302277 -145327873 - MSTC LTR MaLR -382 46 1 2720 203 87 72 chr5 54302731 54303545 -145326605 + LTR1B LTR ERV1 1 826 0 1540 241 73 44 chr5 54303609 54304128 -145326022 - L1ME1 LINE L1 -14 6152 5619 1938 133 0 3 chr5 54304221 54304507 -145325643 - AluSx SINE Alu -15 297 13 744 181 12 41 chr5 54304517 54304688 -145325462 + L1MB5 LINE L1 6009 6174 0 1164 138 0 0 chr5 54304779 54304953 -145325197 - AluSq SINE Alu -10 303 130 1334 179 6 80 chr5 54307030 54307162 -145322988 + AluJo SINE Alu 2 142 -170 2059 78 7 4 chr5 54307162 54307443 -145322707 + AluSc SINE Alu 1 282 -27 1334 179 6 80 chr5 54307443 54307622 -145322528 + AluJo SINE Alu 142 290 -22 2354 73 0 0 chr5 54307624 54307924 -145322226 + AluY SINE Alu 1 300 -11 288 0 0 0 chr5 54308011 54308043 -145322107 + (GA)n Simple_repeat Simple_repeat 1 32 0 2246 86 3 0 chr5 54309071 54309363 -145320787 + AluSp SINE Alu 1 293 -20 577 179 0 86 chr5 54309377 54309494 -145320656 + L1ME LINE L1 5477 5583 -583 1635 135 53 50 chr5 54309494 54309835 -145320315 + MER4A LTR ERV1 1 342 -322 2109 105 0 3 chr5 54309837 54310132 -145320018 + AluSg SINE Alu 1 294 -16 712 158 181 73 chr5 54310145 54310422 -145319728 + MER4C LTR ERV1 157 465 0 465 188 0 0 chr5 54310422 54310502 -145319648 + L1ME LINE L1 5580 5659 -507 630 298 66 40 chr5 54310573 54310875 -145319275 - L2 LINE L2 -444 2870 2561 2412 55 0 0 chr5 54310923 54311216 -145318934 - AluY SINE Alu -18 293 1 224 224 0 20 chr5 54311364 54311413 -145318737 + CT-rich Low_complexity Low_complexity 4 51 0 1800 135 0 18 chr5 54311413 54311695 -145318455 - AluSx SINE Alu -35 277 1 228 277 193 18 chr5 54311702 54311868 -145318282 + L3 LINE CR1 1375 1569 -8 326 208 111 0 chr5 54312175 54312247 -145317903 + MER58B DNA MER1_type 11 90 -251 2461 65 0 7 chr5 54312271 54312580 -145317570 + AluSp SINE Alu 1 307 -6 4747 158 52 14 chr5 54312633 54313155 -145316995 + L1MB4 LINE L1 5119 5619 -561 2119 92 24 3 chr5 54313155 54313447 -145316703 + AluSx SINE Alu 1 298 -14 4747 158 52 14 chr5 54313447 54313946 -145316204 + L1MB4 LINE L1 5619 6180 0 546 133 11 22 chr5 54313944 54314034 -145316116 - L1MD1 LINE L1 -53 6189 6101 * 1234 97 0 0 chr5 54314035 54314200 -145315950 + AluSx SINE Alu 2 166 -146 313 214 14 0 chr5 54314200 54314270 -145315880 - L1MD2 LINE L1 -144 6215 6145 991 182 63 51 chr5 54314272 54314400 -145315750 + MER58B DNA MER1_type 86 211 -2209 2158 113 27 0 chr5 54314400 54314700 -145315450 - AluSx SINE Alu -4 308 1 991 182 63 51 chr5 54314700 54314824 -145315326 + MER58B DNA MER1_type 211 341 0 943 270 119 65 chr5 54315099 54315529 -145314621 - MLT1L LTR MaLR -13 602 197 2185 110 0 0 chr5 54315529 54315828 -145314322 + AluSx SINE Alu 1 299 -13 943 270 119 65 chr5 54315828 54315919 -145314231 - MLT1L LTR MaLR -418 197 112 1957 115 21 0 chr5 54315919 54316206 -145313944 + AluSx SINE Alu 5 297 -15 943 270 119 65 chr5 54316206 54316254 -145313896 - MLT1L LTR MaLR -503 112 1 26 0 0 0 chr5 54316331 54316357 -145313793 + AT_rich Low_complexity Low_complexity 1 26 0 1407 171 107 58 chr5 54316561 54316650 -145313500 - MER2 DNA MER2_type 0 344 261 2250 81 7 0 chr5 54316650 54316945 -145313205 + AluSg1 SINE Alu 2 298 -11 1407 171 107 58 chr5 54316945 54317183 -145312967 - MER2 DNA MER2_type -83 261 1 2290 90 0 0 chr5 54317417 54317718 -145312432 + AluY SINE Alu 1 301 -10 2089 126 0 3 chr5 54317726 54318036 -145312114 + AluSg SINE Alu 1 309 -1 25 31 0 0 chr5 54318120 54318152 -145311998 + AT_rich Low_complexity Low_complexity 1 32 0 2279 196 110 90 chr5 54318473 54319281 -145310869 - LTR1B LTR ERV1 0 826 3 3573 122 41 35 chr5 54319316 54319497 -145310653 - LTR38B LTR ERV1 0 610 432 2164 106 0 3 chr5 54319497 54319800 -145310350 + AluSx SINE Alu 2 303 -9 3573 122 41 35 chr5 54319800 54320224 -145309926 - LTR38B LTR ERV1 -178 432 1 2150 106 3 0 chr5 54320401 54320694 -145309456 + AluSc SINE Alu 1 294 -15 1064 197 86 120 chr5 54320784 54321250 -145308900 + MLT1J2 LTR MaLR 1 450 0 2236 80 3 7 chr5 54321329 54321628 -145308522 + AluSc SINE Alu 1 298 -11 1612 143 50 18 chr5 54322039 54322318 -145307832 + AluJo SINE Alu 1 288 -24 536 270 98 0 chr5 54322472 54322646 -145307504 + L2 LINE L2 3114 3304 -9 1375 58 0 0 chr5 54323226 54323400 -145306750 + AluY SINE Alu 131 304 -7 383 298 0 11 chr5 54323616 54323710 -145306440 - MIR3 SINE MIR -49 159 67 300 356 188 24 chr5 54323889 54324218 -145305932 + L2 LINE L2 2890 3272 0 219 193 123 18 chr5 54324670 54324727 -145305423 + MIR SINE MIR 200 262 0 323 292 39 31 chr5 54324732 54324862 -145305288 + MER117 DNA MER1_type 36 166 -31 728 127 72 149 chr5 54325016 54325095 -145305055 - MER3 DNA MER1_type 0 209 126 2270 82 0 0 chr5 54325095 54325386 -145304764 - AluSg SINE Alu -19 291 1 728 127 72 149 chr5 54325386 54325527 -145304623 - MER3 DNA MER1_type -83 126 6 1697 166 0 20 chr5 54325561 54325856 -145304294 + AluJb SINE Alu 3 291 -21 816 233 12 0 chr5 54326278 54326441 -145303709 + MER45A DNA AcHobo 13 177 -1 743 320 168 5 chr5 54326747 54327134 -145303016 - L2 LINE L2 -18 3295 2846 722 145 0 24 chr5 54327137 54327261 -145302889 + AluSg/x SINE Alu 176 296 -13 9925 39 40 25 chr5 54327274 54328648 -145301502 + SVA Other Other 8 1400 0 614 282 165 4 chr5 54328650 54328898 -145301252 - L2 LINE L2 -474 2840 2553 510 317 92 58 chr5 54329417 54329799 -145300351 + L1 LINE L1 4150 4544 -1602 2205 54 3 63 chr5 54329827 54330142 -145300008 + AluSp SINE Alu 3 298 -15 222 37 0 0 chr5 54330142 54330169 -145299981 + (TA)n Simple_repeat Simple_repeat 2 28 0 644 147 29 0 chr5 54330185 54330287 -145299863 + AluJo SINE Alu 1 105 -207 1587 95 5 5 chr5 54330287 54330509 -145299641 - pTR5 LTR ERV1 -2046 392 171 360 214 31 20 chr5 54330511 54330609 -145299541 - LTR30 LTR ERV1 -80 642 544 4349 156 42 47 chr5 54330609 54331575 -145298575 - pTR5 LTR ERV1 -413 2025 744 1181 175 0 0 chr5 54331575 54331775 -145298375 + AluJo SINE Alu 101 300 -12 2006 104 7 19 chr5 54331860 54332168 -145297982 + AluY SINE Alu 1 304 -7 43 56 0 0 chr5 54332258 54332329 -145297821 + AT_rich Low_complexity Low_complexity 1 71 0 185 169 17 0 chr5 54332351 54332410 -145297740 + (TTTA)n Simple_repeat Simple_repeat 3 62 0 705 169 31 23 chr5 54332538 54332668 -145297482 + FLAM_C SINE Alu 2 132 -11 2217 87 0 19 chr5 54332738 54333048 -145297102 + AluY SINE Alu 1 304 -7 309 292 40 15 chr5 54333176 54333378 -145296772 + L1P5 LINE L1 5255 5461 -695 651 284 11 11 chr5 54333424 54333600 -145296550 - MIR SINE MIR -58 204 29 395 219 159 33 chr5 54333639 54333790 -145296360 + L1ME LINE L1 5501 5670 -451 1740 172 0 0 chr5 54333826 54334111 -145296039 + AluJb SINE Alu 11 295 -17 830 100 17 8 chr5 54334111 54334231 -145295919 + AluSq/x SINE Alu 1 121 -192 926 66 5 66 chr5 54334354 54334550 -145295600 + SVA Other Other 278 461 -925 5989 29 0 4 chr5 54334904 54335592 -145294558 + SVA Other Other 702 1386 0 1272 107 0 0 chr5 54335598 54335766 -145294384 - THE1B LTR MaLR -196 168 1 221 348 29 0 chr5 54335872 54335941 -145294209 + L2 LINE L2 3201 3271 -1 2320 74 0 0 chr5 54336084 54336380 -145293770 + AluY SINE Alu 1 296 -15 786 255 50 42 chr5 54336709 54336968 -145293182 + MIR SINE MIR 2 262 0 449 309 30 62 chr5 54337282 54337525 -145292625 - MIR SINE MIR -21 241 9 2189 88 0 7 chr5 54337849 54338144 -145292006 - AluSq SINE Alu -20 293 1 643 257 111 35 chr5 54338475 54338701 -145291449 + MIR SINE MIR 20 262 0 1955 124 48 0 chr5 54338982 54339272 -145290878 - AluSx SINE Alu -6 306 3 414 0 0 0 chr5 54339374 54339420 -145290730 + (TG)n Simple_repeat Simple_repeat 2 47 0 2130 97 3 7 chr5 54339434 54339733 -145290417 + AluSp SINE Alu 1 298 -15 201 171 0 0 chr5 54339839 54339874 -145290276 + (TAA)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr5 54339878 54339900 -145290250 + AT_rich Low_complexity Low_complexity 1 22 0 488 300 51 7 chr5 54339908 54340076 -145290074 - MIR SINE MIR -51 211 30 1425 157 20 24 chr5 54341264 54341513 -145288637 + AluJo SINE Alu 1 248 -64 310 279 87 70 chr5 54341539 54341711 -145288439 + L1MC2 LINE L1 6052 6226 -118 189 55 82 55 chr5 54341717 54341790 -145288360 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 182 274 96 55 chr5 54341882 54341955 -145288195 + MIR SINE MIR 172 247 -15 1455 152 0 4 chr5 54343549 54343779 -145286371 + AluJo SINE Alu 68 296 -16 363 141 0 0 chr5 54343779 54343843 -145286307 + (GGGGA)n Simple_repeat Simple_repeat 1 64 0 249 331 100 36 chr5 54344186 54344437 -145285713 + L2 LINE L2 2818 3084 -188 2187 107 0 3 chr5 54344606 54344916 -145285234 - AluSc SINE Alu 0 309 1 1178 232 99 36 chr5 54345355 54345825 -145284325 - MLT1H1 LTR MaLR 0 555 1 253 221 245 43 chr5 54345931 54346094 -145284056 + L2 LINE L2 3118 3313 0 1796 178 210 47 chr5 54346271 54346519 -145283631 - MLT1E LTR MaLR 0 593 387 2233 108 0 0 chr5 54346519 54346826 -145283324 - AluSg1 SINE Alu -2 307 1 1796 178 210 47 chr5 54346826 54347087 -145283063 - MLT1E LTR MaLR -206 387 1 2541 63 0 3 chr5 54347883 54348185 -145281965 - AluY SINE Alu -10 301 1 425 86 143 0 chr5 54348257 54348327 -145281823 - MADE1 DNA Mariner 0 80 1 631 147 0 0 chr5 54348349 54348451 -145281699 + U13 snRNA snRNA 1 102 -2 4224 38 57 0 chr5 54348506 54349033 -145281117 + LTR6B LTR ERV1 1 557 -1 447 234 65 32 chr5 54349070 54349111 -145281039 + L1ME3A LINE L1 5998 6036 -134 2201 111 0 23 chr5 54349111 54349417 -145280733 - AluSc SINE Alu -8 301 3 2131 105 0 69 chr5 54349422 54349755 -145280395 - AluSg SINE Alu 0 310 1 447 234 65 32 chr5 54349755 54349861 -145280289 + L1ME3A LINE L1 6039 6156 -14 1692 100 22 4 chr5 54350537 54350768 -145279382 + AluSq SINE Alu 60 294 -19 408 346 19 14 chr5 54350909 54351117 -145279033 - L2 LINE L2 -2428 886 678 2221 108 30 0 chr5 54351372 54351668 -145278482 - AluSx SINE Alu -7 305 1 836 257 140 0 chr5 54352181 54352403 -145277747 - MIR SINE MIR -1 261 9 1344 197 21 11 chr5 54352427 54352706 -145277444 + AluJo SINE Alu 17 298 -14 27 62 0 0 chr5 54352727 54352775 -145277375 + AT_rich Low_complexity Low_complexity 1 48 0 323 288 121 88 chr5 54353839 54354269 -145275881 - L1M2 LINE L1 -5900 949 506 198 0 0 0 chr5 54354902 54354924 -145275226 + (T)n Simple_repeat Simple_repeat 1 22 0 799 249 75 46 chr5 54356390 54356631 -145273519 - MIR SINE MIR -13 249 2 4197 48 10 4 chr5 54357704 54358226 -145271924 + L1PA5 LINE L1 5628 6152 -2 243 305 75 0 chr5 54359607 54359794 -145270356 - L1M4 LINE L1 -1199 4947 4747 1726 150 0 91 chr5 54359803 54360144 -145270006 - AluJo SINE Alu -2 310 1 2257 95 3 0 chr5 54360189 54360483 -145269667 - AluSp SINE Alu -13 300 6 2281 120 0 0 chr5 54360813 54361122 -145269028 - AluSg SINE Alu -1 309 1 611 246 72 64 chr5 54361173 54361409 -145268741 - MIR SINE MIR 0 262 25 279 247 35 0 chr5 54361496 54361581 -145268569 - L1M4 LINE L1 -2199 3947 3860 566 197 0 8 chr5 54361693 54361810 -145268340 + L1ME4a LINE L1 1699 1814 -4582 1630 178 4 4 chr5 54361816 54362080 -145268070 - AluJb SINE Alu -38 274 11 1682 219 111 13 chr5 54362082 54362924 -145267226 + L1ME4a LINE L1 1893 2789 -3426 311 218 46 0 chr5 54362912 54362999 -145267151 + L1ME4a LINE L1 4797 4887 -1328 * 648 246 46 0 chr5 54363009 54363184 -145266966 + MER58A DNA MER1_type 39 221 -3 1201 239 117 14 chr5 54363201 54363426 -145266724 + L1ME4a LINE L1 4895 5096 -1119 2015 130 6 22 chr5 54363426 54363741 -145266409 - AluSx SINE Alu -2 310 1 1201 239 117 14 chr5 54363741 54364004 -145266146 + L1ME4a LINE L1 5096 5433 -782 643 174 204 36 chr5 54364124 54364320 -145265830 - MER46A DNA MER2_type -7 229 1 * 865 178 132 121 chr5 54364320 54364674 -145265476 - MLT1C LTR MaLR -32 358 1 1102 237 5 0 chr5 54364713 54364932 -145265218 + MER58A DNA MER1_type 1 220 -4 274 207 17 0 chr5 54364993 54365051 -145265099 - L2 LINE L2 -250 3063 3005 341 196 54 93 chr5 54365060 54365264 -145264886 + L1ME4a LINE L1 5905 6100 -90 29 0 0 0 chr5 54365306 54365335 -145264815 + AT_rich Low_complexity Low_complexity 1 29 0 1626 179 53 3 chr5 54365693 54365978 -145264172 + AluJb SINE Alu 1 299 -13 319 361 75 17 chr5 54366163 54366354 -145263796 + MIR SINE MIR 1 205 -3 22 56 0 0 chr5 54366463 54366499 -145263651 + AT_rich Low_complexity Low_complexity 1 36 0 28 0 0 0 chr5 54367233 54367261 -145262889 + AT_rich Low_complexity Low_complexity 1 28 0 2330 104 0 0 chr5 54367317 54367616 -145262534 - AluSg SINE Alu -11 299 1 849 160 6 39 chr5 54367949 54368105 -145262045 + AluJo SINE Alu 1 151 -161 729 125 42 0 chr5 54368271 54368391 -145261759 - L1PA16 LINE L1 -9 6157 6033 2271 98 0 0 chr5 54368406 54368711 -145261439 - AluSx SINE Alu -7 305 1 26 0 0 0 chr5 54368720 54368746 -145261404 + AT_rich Low_complexity Low_complexity 1 26 0 624 233 147 38 chr5 54368934 54369248 -145260902 - L1MC4a LINE L1 -1885 5923 5576 490 223 214 18 chr5 54369511 54369735 -145260415 - L1ME3 LINE L1 -20 6142 5875 695 183 0 8 chr5 54369743 54369869 -145260281 - FLAM_C SINE Alu -18 125 1 604 237 103 0 chr5 54369870 54370094 -145260056 - L1ME3 LINE L1 -271 5891 5645 1511 215 97 34 chr5 54370181 54370246 -145259904 + LTR40a LTR ERVL 18 78 -441 2210 98 3 0 chr5 54370246 54370533 -145259617 - AluSg SINE Alu -22 288 1 1511 215 97 34 chr5 54370533 54370933 -145259217 + LTR40a LTR ERVL 78 512 -7 975 182 0 6 chr5 54370968 54371127 -145259023 - AluSg/x SINE Alu -18 292 135 237 33 0 0 chr5 54371127 54371157 -145258993 + (TG)n Simple_repeat Simple_repeat 2 31 0 2029 115 0 0 chr5 54371157 54371435 -145258715 - AluSx SINE Alu -34 278 1 577 230 50 0 chr5 54371435 54371596 -145258554 - L1ME1 LINE L1 -74 6092 5924 824 109 8 8 chr5 54371599 54371718 -145258432 + FLAM_C SINE Alu 14 132 -11 1425 207 47 44 chr5 54371718 54372289 -145257861 - L1ME1 LINE L1 -239 5927 5256 31 0 0 0 chr5 54372808 54372839 -145257311 + AT_rich Low_complexity Low_complexity 1 31 0 245 331 56 7 chr5 54373125 54373267 -145256883 - L3 LINE CR1 -295 1282 1134 1214 178 111 41 chr5 54373311 54373447 -145256703 + AluJo SINE Alu 1 126 -186 2383 119 82 22 chr5 54373447 54373850 -145256300 - MSTA LTR MaLR -1 427 1 1214 178 111 41 chr5 54373850 54373983 -145256167 + AluJo SINE Alu 126 289 -23 420 71 0 0 chr5 54373989 54374045 -145256105 + (TG)n Simple_repeat Simple_repeat 1 56 0 671 183 51 7 chr5 54374054 54374191 -145255959 + MIR SINE MIR 58 200 -62 2179 122 0 3 chr5 54374193 54374488 -145255662 + AluSx SINE Alu 1 294 -18 864 196 0 12 chr5 54374489 54374652 -145255498 + AluSg/x SINE Alu 136 296 -14 193 343 14 0 chr5 54374652 54374722 -145255428 + MIR SINE MIR 189 259 -3 979 322 103 7 chr5 54374775 54375194 -145254956 - L3 LINE CR1 -491 1086 628 848 256 118 75 chr5 54375200 54375759 -145254391 - MLT1G1 LTR MaLR -6 589 7 2356 122 0 0 chr5 54375943 54376255 -145253895 - AluSx SINE Alu 0 312 1 278 329 120 6 chr5 54376269 54376427 -145253723 - L3 LINE CR1 -1072 505 330 2399 76 0 0 chr5 54376457 54376747 -145253403 - AluY SINE Alu -21 290 1 1016 99 0 86 chr5 54377195 54377357 -145252793 - AluJb SINE Alu -81 231 84 192 359 111 0 chr5 54377493 54377610 -145252540 - L2 LINE L2 -537 2777 2648 261 304 98 79 chr5 54377680 54377996 -145252154 - L2 LINE L2 -790 2524 2203 1302 143 25 0 chr5 54378039 54378270 -145251880 - AluSg/x SINE Alu 0 319 84 1468 187 42 8 chr5 54378310 54378572 -145251578 - AluJo SINE Alu -39 273 3 2141 97 28 3 chr5 54379776 54380065 -145250085 - AluSx SINE Alu -16 296 1 21 71 0 0 chr5 54380776 54380818 -145249332 + AT_rich Low_complexity Low_complexity 1 42 0 231 62 0 0 chr5 54380849 54380881 -145249269 + Alu SINE Alu 1 32 -276 2015 143 3 3 chr5 54380881 54381189 -145248961 + AluSx SINE Alu 3 310 -2 867 214 170 51 chr5 54381189 54381637 -145248513 - L1MC5 LINE L1 -70 7891 7359 2254 104 10 7 chr5 54381637 54381946 -145248204 - AluSg SINE Alu 0 310 1 867 214 170 51 chr5 54381946 54382068 -145248082 - L1MC5 LINE L1 -602 7359 7253 271 202 67 119 chr5 54382184 54382377 -145247773 - L1MC4 LINE L1 -27 8015 7833 1035 204 43 43 chr5 54382456 54382779 -145247371 - L1ME2 LINE L1 -1 6163 5841 796 152 115 37 chr5 54382871 54383114 -145247036 - L1MC5 LINE L1 -824 7137 6876 538 94 79 3 chr5 54383144 54383272 -145246878 - AluSp/q SINE Alu -12 301 132 688 275 72 37 chr5 54383274 54383907 -145246243 - L1MC5 LINE L1 -993 6815 6198 312 234 73 88 chr5 54383912 54384117 -145246033 - HAL1 LINE L1 -4 2503 2302 23 54 0 0 chr5 54384122 54384159 -145245991 + AT_rich Low_complexity Low_complexity 1 37 0 238 150 183 0 chr5 54384169 54384229 -145245921 + L1ME2 LINE L1 5952 6022 -142 25 112 0 0 chr5 54384893 54385009 -145245141 + AT_rich Low_complexity Low_complexity 1 116 0 1347 161 132 26 chr5 54385871 54386144 -145244006 - AluJo SINE Alu -10 302 1 804 207 84 38 chr5 54386247 54386460 -145243690 + MER58A DNA MER1_type 2 224 0 889 260 144 30 chr5 54386984 54387203 -145242947 + LTR33 LTR ERVL 1 194 -327 2324 111 0 0 chr5 54387203 54387501 -145242649 - AluSq SINE Alu -15 298 1 889 260 144 30 chr5 54387501 54387747 -145242403 + LTR33 LTR ERVL 194 519 -2 847 87 0 63 chr5 54387911 54388037 -145242113 + AluSg/x SINE Alu 172 289 -21 1865 153 3 14 chr5 54388046 54388341 -145241809 + AluSx SINE Alu 1 292 -20 2454 75 0 0 chr5 54388793 54389087 -145241063 + AluSg SINE Alu 1 294 -16 21 0 0 0 chr5 54389932 54389953 -145240197 + AT_rich Low_complexity Low_complexity 1 21 0 1840 175 0 3 chr5 54390118 54390421 -145239729 - AluJb SINE Alu -10 302 1 720 213 60 0 chr5 54390712 54390862 -145239288 + FRAM SINE Alu 1 156 -20 42 86 0 0 chr5 54391095 54391200 -145238950 + AT_rich Low_complexity Low_complexity 1 105 0 2296 99 0 0 chr5 54391805 54392099 -145238051 - AluSc SINE Alu -15 294 1 22 35 0 0 chr5 54392709 54392738 -145237412 + AT_rich Low_complexity Low_complexity 1 29 0 34 0 0 0 chr5 54393076 54393110 -145237040 + AT_rich Low_complexity Low_complexity 1 34 0 776 135 32 8 chr5 54393112 54393238 -145236912 - FLAM_C SINE Alu -3 130 2 1908 137 46 0 chr5 54393515 54393800 -145236350 - AluSx SINE Alu -13 299 2 384 281 0 21 chr5 54394272 54394368 -145235782 + MIR SINE MIR 58 151 -111 240 333 19 19 chr5 54394487 54394592 -145235558 - MIR SINE MIR -62 146 42 1540 201 7 0 chr5 54394993 54395262 -145234888 - AluJo SINE Alu -33 279 9 2157 100 14 0 chr5 54395299 54395578 -145234572 + AluSp SINE Alu 9 291 -22 2320 102 3 0 chr5 54395893 54396197 -145233953 - AluSx SINE Alu -7 305 1 226 285 179 33 chr5 54397795 54397993 -145232157 + L2 LINE L2 1727 1895 -1419 1575 159 120 18 chr5 54397993 54398276 -145231874 - AluJb SINE Alu 0 312 1 226 285 179 33 chr5 54398276 54398407 -145231743 + L2 LINE L2 1895 2104 -1210 2345 83 6 10 chr5 54398409 54398722 -145231428 - AluSx SINE Alu 0 312 1 23 54 0 0 chr5 54399357 54399394 -145230756 + AT_rich Low_complexity Low_complexity 1 37 0 1798 150 30 23 chr5 54399482 54399782 -145230368 - AluJo SINE Alu -10 302 1 272 280 152 8 chr5 54399799 54399924 -145230226 - L1ME4a LINE L1 -23 6098 5956 396 215 0 0 chr5 54400332 54400439 -145229711 + (TA)n Simple_repeat Simple_repeat 2 108 0 225 0 0 0 chr5 54401359 54401384 -145228766 + (T)n Simple_repeat Simple_repeat 1 25 0 3537 207 85 19 chr5 54401523 54401755 -145228395 - L1ME1 LINE L1 -5 6095 5880 2079 100 28 3 chr5 54401755 54402045 -145228105 - AluSq SINE Alu -8 305 9 3537 207 85 19 chr5 54402045 54402148 -145228002 - L1ME1 LINE L1 -220 5880 5785 2085 136 3 3 chr5 54402148 54402443 -145227707 - AluSx SINE Alu -17 295 1 3537 207 85 19 chr5 54402443 54403044 -145227106 - L1ME1 LINE L1 -315 5785 5225 1890 116 39 11 chr5 54403044 54403328 -145226822 + AluSg SINE Alu 17 308 -2 3537 207 85 19 chr5 54403328 54403888 -145226262 - L1ME1 LINE L1 -875 5225 4501 21 36 0 0 chr5 54403917 54403945 -145226205 + AT_rich Low_complexity Low_complexity 1 28 0 2346 207 165 49 chr5 54404358 54404886 -145225264 - L1ME1 LINE L1 -1581 4499 4034 2235 96 0 26 chr5 54404886 54405189 -145224961 - AluSq SINE Alu -18 295 1 2346 207 165 49 chr5 54405189 54405647 -145224503 - L1ME1 LINE L1 -2046 4034 3398 277 284 0 0 chr5 54405731 54405798 -145224352 - L1ME1 LINE L1 -5978 92 26 240 163 0 0 chr5 54408823 54408866 -145221284 + (CATATA)n Simple_repeat Simple_repeat 5 47 0 22 0 0 0 chr5 54408949 54408971 -145221179 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 54408981 54409002 -145221148 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr5 54412624 54412647 -145217503 + (A)n Simple_repeat Simple_repeat 1 23 0 289 292 212 0 chr5 54414673 54414810 -145215340 - MIR SINE MIR -77 185 20 199 312 25 106 chr5 54415465 54415702 -145214448 + L2 LINE L2 2832 3049 -223 23 33 0 0 chr5 54415867 54415897 -145214253 + AT_rich Low_complexity Low_complexity 1 30 0 1019 184 14 24 chr5 54416059 54416266 -145213884 - AluJo SINE Alu -102 210 6 264 306 20 10 chr5 54416310 54416408 -145213742 - MIR3 SINE MIR -1 207 109 2230 119 0 3 chr5 54417271 54417582 -145212568 + AluSx SINE Alu 1 310 -2 1506 203 0 14 chr5 54418168 54418454 -145211696 - AluJo SINE Alu -25 287 6 233 206 164 0 chr5 54418737 54418810 -145211340 - MER96 DNA MER1_type? -90 85 1 190 80 0 0 chr5 54419767 54419792 -145210358 - MIR SINE MIR -22 240 216 418 303 52 0 chr5 54419855 54420010 -145210140 - MIR SINE MIR -96 166 4 2564 64 3 10 chr5 54420031 54420345 -145209805 + AluSp SINE Alu 1 312 -1 510 304 46 45 chr5 54420534 54420940 -145209210 + LTR16A1 LTR ERVL 73 454 -3 2224 108 38 59 chr5 54421491 54421654 -145208496 + THE1B LTR MaLR 1 166 -198 2449 90 3 0 chr5 54421654 54421965 -145208185 - AluSp SINE Alu -1 312 1 2224 108 38 59 chr5 54421965 54422173 -145207977 + THE1B LTR MaLR 166 364 0 1578 171 31 27 chr5 54422537 54422829 -145207321 + AluJo SINE Alu 2 294 -18 1064 213 87 11 chr5 54423964 54424241 -145205909 + MLT1D LTR MaLR 205 502 -3 251 122 49 0 chr5 54425177 54425218 -145204932 - MER57A LTR ERV1 -66 337 295 2111 123 0 0 chr5 54425854 54426139 -145204011 - AluSx SINE Alu -27 285 1 233 196 62 31 chr5 54426163 54426260 -145203890 + (TATAG)n Simple_repeat Simple_repeat 3 102 0 1121 165 31 54 chr5 54427911 54428135 -145202015 - MER20 DNA MER1_type 0 219 1 1133 208 95 0 chr5 54428350 54428644 -145201506 - MER58B DNA MER1_type -1 340 19 27 29 0 0 chr5 54432561 54432595 -145197555 + AT_rich Low_complexity Low_complexity 1 34 0 1807 182 3 7 chr5 54432595 54432891 -145197259 - AluJb SINE Alu -17 295 1 285 244 77 0 chr5 54433063 54433141 -145197009 + L2 LINE L2 3171 3254 -18 727 149 16 0 chr5 54434520 54434641 -145195509 + MER5A DNA MER1_type 1 123 -66 1685 134 0 4 chr5 54435664 54435910 -145194240 + AluSg/x SINE Alu 66 310 0 198 176 0 0 chr5 54435965 54435999 -145194151 - L2 LINE L2 -3 3310 3277 1173 99 12 6 chr5 54436015 54436176 -145193974 - FRAM SINE Alu -22 154 1 2177 110 3 0 chr5 54436180 54436472 -145193678 - AluSx SINE Alu -17 295 3 470 284 218 6 chr5 54436475 54436832 -145193318 - L2 LINE L2 -240 3073 2636 2391 116 30 25 chr5 54437583 54437945 -145192205 + THE1B LTR MaLR 1 364 0 4225 158 28 64 chr5 54438603 54438985 -145191165 + L1MB5 LINE L1 4990 5384 -790 2377 91 3 0 chr5 54438985 54439281 -145190869 + AluSp SINE Alu 1 297 -16 4225 158 28 64 chr5 54439281 54440105 -145190045 + L1MB5 LINE L1 5384 6161 -13 197 294 185 0 chr5 54440386 54440478 -145189672 - MIR SINE MIR -70 192 84 22 0 0 0 chr5 54441158 54441180 -145188970 + AT_rich Low_complexity Low_complexity 1 22 0 546 224 9 0 chr5 54441269 54441376 -145188774 + MIR3 SINE MIR 85 192 -16 212 301 48 39 chr5 54441720 54441823 -145188327 + MIR3 SINE MIR 98 201 -7 867 120 0 35 chr5 54442105 54442247 -145187903 + FRAM SINE Alu 40 176 0 2273 118 0 16 chr5 54443760 54444075 -145186075 - AluSx SINE Alu -2 310 1 1282 188 186 50 chr5 54444781 54445180 -145184970 + MLT1C LTR MaLR 1 453 -14 262 327 67 0 chr5 54446066 54446231 -145183919 + MIR SINE MIR 87 262 0 1882 134 10 46 chr5 54446334 54446639 -145183511 - AluJb SINE Alu -12 300 7 973 262 0 31 chr5 54446679 54446904 -145183246 - MER58A DNA MER1_type -6 218 1 2281 91 3 0 chr5 54447074 54447417 -145182733 + AluSp SINE Alu 1 344 0 709 237 39 29 chr5 54447429 54447636 -145182514 - MIR SINE MIR -50 212 4 325 271 14 95 chr5 54448018 54448239 -145181911 - L2 LINE L2 -9 3304 3102 286 349 41 41 chr5 54449801 54449939 -145180211 - L3 LINE CR1 -29 1548 1408 2074 125 16 7 chr5 54449939 54450244 -145179906 - AluSx SINE Alu -4 308 1 80 81 0 0 chr5 54450273 54450458 -145179692 + AT_rich Low_complexity Low_complexity 1 185 0 556 158 68 45 chr5 54450463 54450596 -145179554 - L1MB7 LINE L1 0 6184 6049 333 278 22 56 chr5 54451172 54451352 -145178798 + CT-rich Low_complexity Low_complexity 6 179 0 1665 166 6 101 chr5 54451839 54452165 -145177985 + AluJo SINE Alu 1 295 -7 532 191 6 33 chr5 54452174 54452357 -145177793 + G-rich Low_complexity Low_complexity 1 178 0 229 286 0 64 chr5 54452371 54452542 -145177608 + GA-rich Low_complexity Low_complexity 1 160 0 * 234 255 47 9 chr5 54452437 54452543 -145177607 + (GAATG)n Simple_repeat Simple_repeat 2 111 0 2118 90 14 10 chr5 54453972 54454260 -145175890 + AluSx SINE Alu 1 289 -23 1189 138 0 0 chr5 54455012 54455179 -145174971 + AluJb SINE Alu 136 302 -10 242 267 145 61 chr5 54455669 54455800 -145174350 - MIR SINE MIR -70 192 51 2575 152 63 43 chr5 54456876 54456914 -145173236 + MLT1D LTR MaLR 3 39 -466 2538 77 0 0 chr5 54456914 54457225 -145172925 + AluY SINE Alu 1 311 0 2575 152 63 43 chr5 54457225 54457679 -145172471 + MLT1D LTR MaLR 39 505 0 240 271 0 29 chr5 54457679 54457738 -145172412 - L2 LINE L2 -9 3263 3205 344 276 38 0 chr5 54457750 54457855 -145172295 + MIR SINE MIR 80 188 -74 293 231 159 155 chr5 54457892 54458143 -145172007 - MIR SINE MIR -8 254 3 514 174 22 101 chr5 54458221 54458319 -145171831 - L1MEc LINE L1 -4293 2103 2016 2036 134 0 0 chr5 54458319 54458625 -145171525 + AluSx SINE Alu 1 306 0 514 174 22 101 chr5 54458625 54458663 -145171487 - L1MEc LINE L1 -4380 2016 1977 21 36 0 0 chr5 54459132 54459160 -145170990 + AT_rich Low_complexity Low_complexity 1 28 0 215 305 73 0 chr5 54459671 54459753 -145170397 + MIR3 SINE MIR 98 185 -23 2070 87 39 48 chr5 54460927 54461088 -145169062 - AluSx SINE Alu -6 306 148 2417 68 10 0 chr5 54461088 54461384 -145168766 - AluY SINE Alu -12 299 1 2070 87 39 48 chr5 54461384 54461531 -145168619 - AluSx SINE Alu -164 148 1 388 337 62 17 chr5 54461668 54461846 -145168304 + MIR SINE MIR 27 212 -50 243 236 198 19 chr5 54461924 54462030 -145168120 - L2 LINE L2 -7 3306 3182 2244 106 7 3 chr5 54462415 54462718 -145167432 + AluSp SINE Alu 1 304 -9 219 36 0 0 chr5 54462718 54462746 -145167404 + (CAAG)n Simple_repeat Simple_repeat 2 29 0 3107 101 24 5 chr5 54463286 54463712 -145166438 + MER61C LTR ERV1 1 434 0 1012 241 106 93 chr5 54463727 54464278 -145165872 + L3 LINE CR1 374 935 -642 1667 146 61 8 chr5 54464278 54464539 -145165611 + AluJo SINE Alu 11 285 -27 1012 241 106 93 chr5 54464539 54464608 -145165542 + L3 LINE CR1 935 1002 -575 775 253 27 24 chr5 54464613 54464992 -145165158 + L1ME3A LINE L1 5055 5438 -726 540 225 35 21 chr5 54464998 54465140 -145165010 + L1ME3A LINE L1 5783 5926 -244 261 316 57 45 chr5 54465294 54465471 -145164679 + L1ME3A LINE L1 5992 6170 0 1141 211 60 131 chr5 54466403 54466754 -145163396 - L1ME4a LINE L1 -3 6118 5744 4098 161 8 68 chr5 54466754 54466978 -145163172 + MER50 LTR ERV1 1 237 -497 2092 105 51 0 chr5 54466978 54467272 -145162878 + AluSg SINE Alu 1 309 -1 4098 161 8 68 chr5 54467272 54467658 -145162492 + MER50 LTR ERV1 237 556 -178 2455 87 0 0 chr5 54467658 54467968 -145162182 - AluY SINE Alu -1 310 1 4098 161 8 68 chr5 54467968 54468137 -145162013 + MER50 LTR ERV1 556 734 0 1141 211 60 131 chr5 54468137 54468486 -145161664 - L1ME4a LINE L1 -377 5744 5468 751 87 10 0 chr5 54468511 54468615 -145161535 - L1MA1 LINE L1 0 6302 6198 201 291 110 39 chr5 54468834 54468961 -145161189 - MIR SINE MIR -30 232 97 321 276 51 86 chr5 54469176 54469259 -145160891 + L1MB7 LINE L1 2 86 -6456 2265 105 3 3 chr5 54469259 54469563 -145160587 + AluSc SINE Alu 1 304 -5 321 276 51 86 chr5 54469563 54469736 -145160414 + L1MB7 LINE L1 86 249 -6293 5660 217 47 43 chr5 54470011 54470037 -145160113 + L1MB7 LINE L1 802 826 -5999 1786 177 10 3 chr5 54470037 54470336 -145159814 + AluJb SINE Alu 1 301 -11 5660 217 47 43 chr5 54470336 54472094 -145158056 + L1MB7 LINE L1 826 2736 -4089 675 233 31 0 chr5 54472094 54472223 -145157927 + FLAM_C SINE Alu 1 133 0 5660 217 47 43 chr5 54472223 54472389 -145157761 + L1MB7 LINE L1 2736 2900 -3925 2334 86 0 0 chr5 54472578 54472858 -145157292 - AluSc SINE Alu -24 285 6 364 83 0 0 chr5 54472932 54472980 -145157170 - MADE1 DNA Mariner -32 48 1 8235 175 45 16 chr5 54473463 54476102 -145154048 + L1MB7 LINE L1 3972 6681 -1 23 0 0 0 chr5 54476161 54476184 -145153966 + AT_rich Low_complexity Low_complexity 1 23 0 275 158 0 18 chr5 54476337 54476394 -145153756 + CT-rich Low_complexity Low_complexity 3 58 0 247 223 41 74 chr5 54477250 54477371 -145152779 + L1ME4a LINE L1 5933 6049 -72 199 214 0 24 chr5 54477671 54477713 -145152437 - MIR3 SINE MIR -4 204 164 1096 208 78 0 chr5 54477763 54477994 -145152156 + MIR SINE MIR 14 262 0 253 353 74 0 chr5 54478019 54478141 -145152009 + L2 LINE L2 2932 3062 -210 1385 253 15 12 chr5 54478606 54478946 -145151204 + MER58B DNA MER1_type 1 341 0 189 233 137 41 chr5 54479012 54479085 -145151065 + L3b LINE CR1 1296 1375 -208 2184 124 0 0 chr5 54479215 54479505 -145150645 + AluSx SINE Alu 1 290 -22 27 0 0 0 chr5 54479556 54479583 -145150567 + AT_rich Low_complexity Low_complexity 1 27 0 205 158 26 0 chr5 54479657 54479695 -145150455 - MIR SINE MIR -103 105 67 1944 173 8 92 chr5 54480781 54481000 -145149150 + Charlie4a DNA MER1_type 17 172 -1789 2877 67 8 17 chr5 54481000 54481356 -145148794 + THE1A LTR MaLR 3 355 0 1944 173 8 92 chr5 54481356 54481638 -145148512 + Charlie4a DNA MER1_type 172 476 -32 813 106 0 33 chr5 54481653 54481920 -145148230 + (CA)n Simple_repeat Simple_repeat 1 258 0 2167 97 19 89 chr5 54482331 54482692 -145147458 + MER1B DNA MER1_type 1 336 -1 450 127 37 45 chr5 54484053 54484301 -145145849 + (TG)n Simple_repeat Simple_repeat 1 245 0 392 91 49 42 chr5 54484348 54484491 -145145659 + (TG)n Simple_repeat Simple_repeat 2 145 0 715 58 52 29 chr5 54484536 54484710 -145145440 + (TG)n Simple_repeat Simple_repeat 2 179 0 383 214 204 0 chr5 54485571 54485674 -145144476 + MLT1I LTR MaLR 285 408 -1 1620 197 13 51 chr5 54486131 54486284 -145143866 + L1MD3 LINE L1 7630 7787 -208 2224 101 0 23 chr5 54486284 54486591 -145143559 + AluSg SINE Alu 1 300 -10 1620 197 13 51 chr5 54486591 54486812 -145143338 + L1MD3 LINE L1 7787 7990 -5 2196 123 55 19 chr5 54487379 54487704 -145142446 - MER1B DNA MER1_type 0 337 1 2119 151 85 19 chr5 54487834 54488199 -145141951 + MLT1B LTR MaLR 1 389 -1 2002 141 24 35 chr5 54488482 54488608 -145141542 + MER44D DNA MER2_type 2 128 -2363 2171 122 7 0 chr5 54488608 54488902 -145141248 - AluSx SINE Alu -16 296 1 2002 141 24 35 chr5 54488902 54489116 -145141034 + MER44D DNA MER2_type 128 608 -1 258 306 116 90 chr5 54489815 54490194 -145139956 + L2 LINE L2 2871 3259 -13 24 0 0 0 chr5 54490850 54490874 -145139276 + AT_rich Low_complexity Low_complexity 1 24 0 255 300 11 44 chr5 54491003 54491093 -145139057 + MIR SINE MIR 11 97 -165 231 261 43 43 chr5 54491095 54491187 -145138963 - L2 LINE L2 -32 3240 3149 1951 151 0 10 chr5 54491587 54491891 -145138259 + AluJb SINE Alu 1 301 -11 1909 175 0 0 chr5 54492792 54493101 -145137049 + AluSx SINE Alu 1 309 -3 1278 151 17 54 chr5 54493603 54493842 -145136308 + AluJo SINE Alu 71 300 -12 32 26 0 0 chr5 54494167 54494206 -145135944 + AT_rich Low_complexity Low_complexity 1 39 0 2207 128 0 0 chr5 54494214 54494526 -145135624 - AluSx SINE Alu 0 312 1 341 182 0 15 chr5 54494559 54494625 -145135525 - MER116 DNA Mariner 0 80 16 422 330 37 23 chr5 54494829 54495044 -145135106 - MIR SINE MIR -33 229 12 204 40 0 0 chr5 54495669 54495694 -145134456 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 815 257 64 9 chr5 54495995 54496213 -145133937 - MIR SINE MIR 0 262 33 217 274 97 0 chr5 54496202 54496264 -145133886 + MIR3 SINE MIR 114 181 -27 * 2264 87 3 7 chr5 54496517 54496832 -145133318 + AluSq SINE Alu 1 314 0 400 268 98 81 chr5 54496968 54497263 -145132887 + HAL1 LINE L1 1 300 -2207 3409 182 18 41 chr5 54497268 54497864 -145132286 - MER82 DNA MER2_type -1 652 71 2336 92 3 16 chr5 54497864 54498179 -145131971 - AluSp SINE Alu -1 312 2 3409 182 18 41 chr5 54498179 54498241 -145131909 - MER82 DNA MER2_type -582 71 9 4345 251 72 35 chr5 54498380 54499921 -145130229 + HAL1 LINE L1 910 2507 0 322 281 18 18 chr5 54500281 54500395 -145129755 + L1ME LINE L1 5615 5728 -393 2807 171 121 116 chr5 54500422 54500751 -145129399 + L1MD3 LINE L1 6756 7082 -913 327 196 19 112 chr5 54500751 54500858 -145129292 + MLT1F1 LTR MaLR 35 131 -436 2807 171 121 116 chr5 54500858 54501395 -145128755 + L1MD3 LINE L1 7082 7615 -380 1967 110 46 18 chr5 54501395 54501676 -145128474 - AluSx SINE Alu -23 289 1 2807 171 121 116 chr5 54501676 54501689 -145128461 + L1MD3 LINE L1 7615 7626 -369 2172 112 48 0 chr5 54501689 54502026 -145128124 - AluSg SINE Alu 0 310 1 2807 171 121 116 chr5 54502026 54502075 -145128075 + L1MD3 LINE L1 7626 7990 -5 515 213 138 44 chr5 54502171 54502186 -145127964 - MIR3 SINE MIR -2 206 194 1783 108 21 0 chr5 54502186 54502426 -145127724 - AluSg SINE Alu -19 291 47 515 213 138 44 chr5 54502426 54502570 -145127580 - MIR3 SINE MIR -14 194 32 6308 168 71 24 chr5 54502687 54503171 -145126979 + L1MCa LINE L1 20 480 -5946 1754 153 40 35 chr5 54503171 54503544 -145126606 - THE1C LTR MaLR 0 375 1 6308 168 71 24 chr5 54503544 54504441 -145125709 + L1MCa LINE L1 480 1466 -4960 1705 128 34 17 chr5 54504457 54504902 -145125248 - L1MCa LINE L1 -4403 2023 1484 444 97 14 0 chr5 54504902 54504974 -145125176 + L1PA16 LINE L1 6085 6157 -9 1293 248 3 0 chr5 54505109 54505472 -145124678 + L1MCa LINE L1 2514 2877 -3549 183 337 43 119 chr5 54506216 54506519 -145123631 - L2 LINE L2 -49 3223 2944 748 202 73 65 chr5 54506622 54506908 -145123242 + MLT1C LTR MaLR 15 316 -151 820 146 16 0 chr5 54506909 54507032 -145123118 + FLAM_C SINE Alu 1 125 -18 836 167 26 13 chr5 54507051 54507207 -145122943 + MLT1C LTR MaLR 302 459 -8 411 320 67 67 chr5 54508021 54508377 -145121773 - L2 LINE L2 -27 3245 2890 448 290 32 42 chr5 54508420 54508637 -145121513 + L2 LINE L2 1811 2025 -1289 1227 164 66 27 chr5 54508637 54508893 -145121257 + MER63B DNA MER1_type 1 266 -170 477 207 140 18 chr5 54511004 54511168 -145118982 + MER63B DNA MER1_type 249 432 -3 460 248 33 0 chr5 54511168 54511289 -145118861 + L2 LINE L2 2015 2139 -1175 209 278 19 0 chr5 54511292 54511346 -145118804 + GA-rich Low_complexity Low_complexity 2 56 0 825 191 156 11 chr5 54511463 54511716 -145118434 + MER33 DNA MER1_type 1 301 -2284 2071 116 20 0 chr5 54511716 54512008 -145118142 - AluSx SINE Alu -14 298 1 825 191 156 11 chr5 54512008 54512037 -145118113 + MER33 DNA MER1_type 301 324 0 32 26 0 0 chr5 54512221 54512260 -145117890 + AT_rich Low_complexity Low_complexity 1 39 0 937 142 42 90 chr5 54512329 54512541 -145117609 - MER105 DNA DNA 0 204 3 269 309 40 40 chr5 54512556 54512731 -145117419 - MARNA DNA Mariner -411 175 1 314 197 26 53 chr5 54513282 54513347 -145116803 + MER5A DNA MER1_type 10 74 -115 1448 172 34 89 chr5 54513347 54513506 -145116644 + AluJo SINE Alu 1 134 -178 2147 142 0 0 chr5 54513506 54513801 -145116349 + AluSx SINE Alu 1 295 -17 1448 172 34 89 chr5 54513801 54513967 -145116183 + AluJo SINE Alu 134 308 -4 299 222 0 12 chr5 54513981 54514062 -145116088 + LTR16A LTR ERVL 290 369 -81 188 273 13 65 chr5 54514152 54514229 -145115921 - L2 LINE L2 -45 3227 3155 1509 111 10 0 chr5 54514292 54514500 -145115650 - AluSp SINE Alu -9 304 95 401 131 0 0 chr5 54514501 54514562 -145115588 - AluJ/FLAM SINE Alu -251 61 1 588 193 33 67 chr5 54514861 54515011 -145115139 + MER45A DNA AcHobo 34 178 0 2058 59 55 7 chr5 54515026 54515326 -145114824 - AluY SINE Alu 0 313 1 2102 131 111 35 chr5 54516417 54516813 -145113337 - MSTB LTR MaLR 0 426 1 1807 144 49 38 chr5 54517016 54517383 -145112767 - THE1C LTR MaLR -4 371 1 192 77 0 0 chr5 54517937 54517963 -145112187 + (TTG)n Simple_repeat Simple_repeat 2 27 0 226 205 39 13 chr5 54518115 54518193 -145111957 + L1MCc LINE L1 23 102 -6321 1614 286 41 19 chr5 54518714 54519246 -145110904 + MLT1E LTR MaLR 50 593 0 237 203 34 0 chr5 54520308 54520367 -145109783 - HsTC2 DNA Tc2 -608 1290 1230 * 514 195 44 9 chr5 54520364 54520477 -145109673 - HsTC2 DNA Tc2 -1774 124 8 2023 194 162 38 chr5 54520517 54521129 -145109021 + MER76 LTR ERV 1 688 0 625 136 18 0 chr5 54522114 54522224 -145107926 + MER3 DNA MER1_type 58 122 -87 1137 173 41 5 chr5 54522231 54522527 -145107623 + MER3 DNA MER1_type 2233 2580 0 1005 256 76 39 chr5 54523319 54523702 -145106448 + MLT1J2 LTR MaLR 46 442 -8 2727 175 27 70 chr5 54523813 54524453 -145105697 + LTR9 LTR ERV1 1 612 0 2827 201 102 9 chr5 54524483 54525240 -145104910 + L1ME3 LINE L1 5336 6162 0 215 241 172 17 chr5 54525242 54525300 -145104850 - MIR SINE MIR -160 102 36 447 168 248 0 chr5 54527512 54527613 -145102537 + FLAM_C SINE Alu 2 127 -6 942 203 55 23 chr5 54528073 54528290 -145101860 + Tigger5 DNA MER2_type 15 238 -2085 * 2041 139 88 10 chr5 54528285 54528695 -145101455 + Tigger5 DNA MER2_type 1882 2323 0 394 285 133 7 chr5 54528913 54529064 -145101086 + HAL1 LINE L1 1141 1310 -1197 1635 119 39 17 chr5 54529699 54530057 -145100093 + Tigger4(Zombi) DNA MER2_type 1 2731 0 664 79 0 0 chr5 54530630 54530719 -145099431 - L1PA5 LINE L1 0 6154 6066 2097 87 31 10 chr5 54531233 54531521 -145098629 + AluSg SINE Alu 1 294 -16 24 0 0 0 chr5 54532531 54532555 -145097595 + AT_rich Low_complexity Low_complexity 1 24 0 2113 126 3 46 chr5 54532904 54533230 -145096920 + AluSx SINE Alu 1 312 0 1928 139 28 3 chr5 54534201 54534489 -145095661 + AluSg SINE Alu 1 295 -15 246 285 57 8 chr5 54534500 54534623 -145095527 - MIR SINE MIR -10 252 124 205 247 24 94 chr5 54535385 54535470 -145094680 + L2 LINE L2 3168 3246 -26 240 276 230 0 chr5 54536061 54536148 -145094002 - L2 LINE L2 0 3272 3166 2283 46 0 98 chr5 54536385 54536711 -145093439 - AluY SINE Alu -17 294 1 300 182 9 64 chr5 54536720 54536830 -145093320 + MER31-int LTR ERV1 1183 1286 -3650 294 213 131 16 chr5 54537416 54537538 -145092612 - Charlie1 DNA MER1_type -1 2760 2625 260 296 12 0 chr5 54537559 54537640 -145092510 - Charlie1 DNA MER1_type -2650 111 30 183 204 0 0 chr5 54537953 54537997 -145092153 + A-rich Low_complexity Low_complexity 1 44 0 318 252 69 80 chr5 54538019 54538368 -145091782 + MER31-int LTR ERV1 2605 2949 -1987 1044 150 109 41 chr5 54538414 54538584 -145091566 + MER46A DNA MER2_type 1 191 -2540 2207 116 0 3 chr5 54538584 54538887 -145091263 + AluSq SINE Alu 1 302 -11 1044 150 109 41 chr5 54538887 54538936 -145091214 + MER46A DNA MER2_type 191 235 -1 213 377 0 13 chr5 54539197 54539274 -145090876 - MER5B DNA MER1_type 0 178 103 254 213 0 33 chr5 54539373 54539434 -145090716 + Charlie1 DNA MER1_type 36 94 -2667 41241 42 3 1 chr5 54539526 54545665 -145084485 + L1PA3 LINE L1 2 6154 -1 2991 45 13 3 chr5 54545665 54546036 -145084114 + L1PA5 LINE L1 5771 6151 -3 1251 235 47 92 chr5 54546396 54547169 -145082981 + MER31-int LTR ERV1 3323 4060 -876 507 234 71 44 chr5 54547507 54547638 -145082512 + LTR37A LTR ERV1 127 268 -158 1235 113 24 97 chr5 54547638 54547886 -145082264 + MER30 DNA MER1_type 1 230 0 507 234 71 44 chr5 54547886 54547980 -145082170 + LTR37A LTR ERV1 268 358 -68 2421 80 0 3 chr5 54548369 54548668 -145081482 + AluY SINE Alu 1 298 -13 721 229 14 0 chr5 54548756 54548896 -145081254 + MIR SINE MIR 92 233 -29 1839 174 3 10 chr5 54549317 54549627 -145080523 + AluJb SINE Alu 1 308 -4 1540 204 27 3 chr5 54549634 54549928 -145080222 + AluJo SINE Alu 5 305 -7 21 36 0 0 chr5 54550356 54550384 -145079766 + AT_rich Low_complexity Low_complexity 1 28 0 229 336 142 0 chr5 54551579 54551692 -145078458 - L2 LINE L2 -5 3267 3139 1822 145 3 40 chr5 54551849 54552173 -145077977 + AluJb SINE Alu 1 312 0 230 337 114 24 chr5 54552479 54552645 -145077505 - L2 LINE L2 -610 2704 2524 1969 196 73 75 chr5 54552652 54553198 -145076952 + MLT2B3 LTR ERVL 2 546 -8 1734 181 0 17 chr5 54553217 54553505 -145076645 - AluJb SINE Alu -29 283 1 2348 90 3 0 chr5 54553728 54554029 -145076121 + AluSp SINE Alu 1 302 -11 193 357 54 27 chr5 54554230 54554342 -145075808 + L2 LINE L2 3193 3307 -6 2301 77 0 55 chr5 54554493 54554818 -145075332 + AluSq SINE Alu 1 307 -6 326 188 167 14 chr5 54554824 54554962 -145075188 - HsTC2 DNA Tc2 -27 1871 1713 739 331 66 46 chr5 54554977 54555475 -145074675 + ERVL LTR ERVL 4449 4956 -808 461 182 0 11 chr5 54555476 54555564 -145074586 - Tigger5 DNA MER2_type 0 2323 2237 345 24 0 0 chr5 54555927 54555969 -145074181 + (CA)n Simple_repeat Simple_repeat 2 43 0 29 28 0 0 chr5 54556143 54556179 -145073971 + AT_rich Low_complexity Low_complexity 1 36 0 1474 73 5 0 chr5 54556452 54556644 -145073506 + AluY SINE Alu 119 311 0 736 193 82 72 chr5 54556791 54556845 -145073305 + MER3 DNA MER1_type 1 53 -156 2161 101 0 47 chr5 54556845 54557163 -145072987 - AluSc SINE Alu -6 303 1 736 193 82 72 chr5 54557163 54557315 -145072835 + MER3 DNA MER1_type 53 209 0 369 329 81 47 chr5 54557967 54558201 -145071949 + MIR SINE MIR 8 249 -13 2304 104 0 3 chr5 54558547 54558854 -145071296 + AluSx SINE Alu 1 306 -6 470 98 12 0 chr5 54558876 54558958 -145071192 - L1PB2 LINE L1 0 6151 6069 1370 219 201 35 chr5 54559105 54559191 -145070959 + MLT1F1 LTR MaLR 1 71 -496 907 221 0 22 chr5 54559191 54559372 -145070778 + MER45A DNA AcHobo 2 178 0 1370 219 201 35 chr5 54559372 54559768 -145070382 + MLT1F1 LTR MaLR 71 563 -4 280 250 31 97 chr5 54559819 54559920 -145070230 + L1ME LINE L1 5582 5665 -456 1679 180 28 3 chr5 54559920 54560209 -145069941 - AluJb SINE Alu -16 296 1 280 250 31 97 chr5 54560209 54560303 -145069847 + L1ME LINE L1 5665 5764 -357 1512 198 46 3 chr5 54560517 54560800 -145069350 - AluJo SINE Alu -17 295 1 2412 172 43 47 chr5 54563971 54564460 -145065690 - MER68 LTR ERV1 0 562 76 3279 134 8 71 chr5 54564460 54564862 -145065288 + MLT2B3 LTR ERVL 1 427 -127 2094 97 7 0 chr5 54564862 54565151 -145064999 + L1PA6 LINE L1 5864 6154 0 3279 134 8 71 chr5 54565151 54565287 -145064863 + MLT2B3 LTR ERVL 427 501 -53 606 28 0 0 chr5 54565287 54565359 -145064791 + (TCCA)n Simple_repeat Simple_repeat 3 74 0 3279 134 8 71 chr5 54565359 54565410 -145064740 + MLT2B3 LTR ERVL 501 554 0 2254 105 13 0 chr5 54565901 54566206 -145063944 + AluSx SINE Alu 1 309 -3 1925 106 23 4 chr5 54566403 54566668 -145063482 - AluSc SINE Alu -37 272 3 396 271 104 7 chr5 54566670 54566814 -145063336 - L1MC/D LINE L1 -2040 5768 5611 2022 133 17 0 chr5 54567204 54567498 -145062652 - AluSx SINE Alu -13 299 1 256 212 61 0 chr5 54568059 54568125 -145062025 + (CTAAA)n Simple_repeat Simple_repeat 5 74 0 235 246 158 44 chr5 54568790 54568904 -145061246 - MIR SINE MIR -22 240 114 2306 99 0 0 chr5 54570087 54570381 -145059769 - AluSx SINE Alu -18 294 1 332 252 36 36 chr5 54570635 54570774 -145059376 - L1MDa LINE L1 -3095 3034 2896 1206 89 11 11 chr5 54571228 54571407 -145058743 - L1PA10 LINE L1 -3 6165 5987 920 87 0 0 chr5 54571407 54571522 -145058628 - 5S rRNA rRNA -4 117 3 653 190 41 8 chr5 54571550 54571671 -145058479 - AluJb SINE Alu -187 125 1 318 291 104 72 chr5 54572131 54572475 -145057675 - L1MDa LINE L1 -4559 1572 1274 351 268 85 65 chr5 54572550 54572796 -145057354 - L1MDa LINE L1 -4895 1224 974 2277 103 3 0 chr5 54572852 54573154 -145056996 - AluSx SINE Alu -9 303 1 735 219 128 5 chr5 54573416 54573612 -145056538 + L1M4 LINE L1 5 224 -6318 * 2154 189 102 8 chr5 54573609 54574117 -145056033 + L1MB4 LINE L1 5622 6177 -3 479 186 39 0 chr5 54574117 54574219 -145055931 + L1M4 LINE L1 1587 1692 -4850 2491 155 54 48 chr5 54574229 54574541 -145055609 + L1M4 LINE L1 5402 5711 -971 1896 168 0 7 chr5 54574541 54574844 -145055306 + AluJo SINE Alu 1 301 -11 2491 155 54 48 chr5 54574844 54575067 -145055083 + L1M4 LINE L1 5711 5931 -751 1738 178 10 7 chr5 54575067 54575370 -145054780 + AluJb SINE Alu 1 304 -8 2491 155 54 48 chr5 54575370 54575732 -145054418 + L1M4 LINE L1 5931 6292 -390 1705 138 16 4 chr5 54575734 54575987 -145054163 + MLT1A1 LTR MaLR 110 365 0 292 235 25 12 chr5 54575989 54576070 -145054080 + L1ME3A LINE L1 4613 4694 -1452 1851 139 120 21 chr5 54576082 54576464 -145053686 - MSTB1 LTR MaLR -12 420 1 731 294 55 3 chr5 54576465 54576757 -145053393 + L1ME3A LINE L1 4690 4996 -1150 2111 82 50 0 chr5 54576770 54577050 -145053100 - AluSx SINE Alu -18 294 1 232 104 83 0 chr5 54577058 54577106 -145053044 + L1MC4 LINE L1 7991 8042 0 * 1362 227 145 41 chr5 54577098 54577845 -145052305 + L1ME3A LINE L1 5293 6142 -28 1982 133 10 7 chr5 54578830 54579132 -145051018 + AluSx SINE Alu 4 306 -6 1484 140 54 7 chr5 54579136 54579414 -145050736 - L1 LINE L1 -1315 4831 4541 763 193 0 0 chr5 54579413 54579553 -145050597 - L1P LINE L1 -1804 4342 4203 * 5915 98 26 2 chr5 54579553 54580864 -145049286 + L1PA15 LINE L1 4830 6164 -1 187 270 0 0 chr5 54581341 54581378 -145048772 - L2 LINE L2 -23 3249 3213 2068 116 0 7 chr5 54581539 54581833 -145048317 - AluSx SINE Alu -20 292 1 287 308 13 0 chr5 54582001 54582079 -145048071 - MER5A DNA MER1_type -13 176 98 508 175 29 0 chr5 54582666 54582769 -145047381 + L1MD3 LINE L1 7890 7995 0 1978 110 0 47 chr5 54582874 54583174 -145046976 + AluSg SINE Alu 1 286 -24 511 329 82 16 chr5 54583175 54583418 -145046732 - MIR SINE MIR 0 262 4 216 0 0 0 chr5 54583553 54583577 -145046573 + (TA)n Simple_repeat Simple_repeat 2 25 0 379 337 112 6 chr5 54584115 54584293 -145045857 - MIR SINE MIR -31 231 35 287 258 72 31 chr5 54584330 54584427 -145045723 + MER5A DNA MER1_type 18 118 -71 22 56 0 0 chr5 54585558 54585594 -145044556 + AT_rich Low_complexity Low_complexity 1 36 0 182 370 96 44 chr5 54586408 54586678 -145043472 + L2 LINE L2 2900 3183 -89 2183 114 10 7 chr5 54587083 54587391 -145042759 + AluSq SINE Alu 3 311 -2 21 36 0 0 chr5 54587692 54587720 -145042430 + AT_rich Low_complexity Low_complexity 1 28 0 205 86 0 29 chr5 54588458 54588493 -145041657 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 25 31 0 0 chr5 54589074 54589106 -145041044 + AT_rich Low_complexity Low_complexity 1 32 0 229 258 56 56 chr5 54589469 54589682 -145040468 + L1M4 LINE L1 2733 2945 -3201 1420 173 12 24 chr5 54589833 54590081 -145040069 + AluJo SINE Alu 37 281 -31 270 0 0 0 chr5 54590090 54590120 -145040030 + (T)n Simple_repeat Simple_repeat 1 30 0 694 254 149 56 chr5 54590121 54590868 -145039282 + L1M4 LINE L1 3159 3974 -2172 244 91 146 18 chr5 54590876 54590923 -145039227 + L1ME LINE L1 5709 5765 -399 1968 152 0 3 chr5 54590923 54591225 -145038925 - AluSx SINE Alu -9 303 3 3417 79 31 2 chr5 54591389 54591871 -145038279 + L1PB1 LINE L1 5655 6150 -1 183 260 96 67 chr5 54592459 54592563 -145037587 - MIR SINE MIR -72 136 30 552 234 170 0 chr5 54592647 54592788 -145037362 - MER5A DNA MER1_type -18 171 7 954 249 116 53 chr5 54592794 54593267 -145036883 + L1ME3A LINE L1 5668 6170 0 483 310 129 20 chr5 54593377 54593835 -145036315 + L1ME3 LINE L1 3656 4163 -1983 324 252 28 19 chr5 54593859 54593966 -145036184 + L1ME3 LINE L1 4877 4984 -1162 17128 28 1 0 chr5 54593997 54596801 -145033349 + L1PA3 LINE L1 3334 6151 -4 24 0 0 0 chr5 54596809 54596833 -145033317 + AT_rich Low_complexity Low_complexity 1 24 0 287 175 0 0 chr5 54596833 54596890 -145033260 + L1MB2 LINE L1 6114 6170 -1 618 308 68 39 chr5 54597297 54597452 -145032698 + L1ME3 LINE L1 5268 5417 -745 2042 145 0 3 chr5 54597452 54597755 -145032395 + AluJo SINE Alu 2 303 -9 618 308 68 39 chr5 54597755 54598142 -145032008 + L1ME3 LINE L1 5417 5826 -336 23 0 0 0 chr5 54598852 54598875 -145031275 + AT_rich Low_complexity Low_complexity 1 23 0 235 237 104 89 chr5 54599407 54599542 -145030608 + HAL1 LINE L1 720 856 -1651 1474 203 0 43 chr5 54599543 54599844 -145030306 - AluJo SINE Alu -21 291 4 22 35 0 0 chr5 54600325 54600354 -145029796 + AT_rich Low_complexity Low_complexity 1 29 0 1065 169 101 13 chr5 54601178 54601415 -145028735 + L1MB3 LINE L1 5919 6176 -7 1434 172 29 83 chr5 54601423 54601589 -145028561 - AluJo SINE Alu -13 299 156 2209 114 10 0 chr5 54601589 54601886 -145028264 - AluSc SINE Alu -9 300 1 1434 172 29 83 chr5 54601886 54602033 -145028117 - AluJo SINE Alu -156 156 3 488 222 70 3 chr5 54603041 54603208 -145026942 + MER58A DNA MER1_type 1 224 0 1835 155 13 3 chr5 54603264 54603567 -145026583 + AluJb SINE Alu 1 306 -6 2190 97 3 26 chr5 54603806 54604117 -145026033 + AluSp SINE Alu 1 304 -9 2233 120 0 0 chr5 54605257 54605565 -145024585 + AluSx SINE Alu 1 308 -4 1302 213 149 8 chr5 54605574 54605936 -145024214 + MLT1D LTR MaLR 93 505 0 193 283 241 19 chr5 54605937 54606149 -145024001 + L2 LINE L2 2884 3142 -171 1976 145 0 3 chr5 54607185 54607481 -145022669 - AluSx SINE Alu -17 295 1 2193 103 0 45 chr5 54608167 54608478 -145021672 + AluSx SINE Alu 1 297 -15 1884 146 14 0 chr5 54608521 54608815 -145021335 + AluSx SINE Alu 1 298 -14 673 171 101 31 chr5 54608961 54609090 -145021060 + FLAM_C SINE Alu 3 140 -3 2134 107 30 0 chr5 54611550 54611848 -145018302 + AluSx SINE Alu 1 307 -5 2438 52 3 13 chr5 54612149 54612456 -145017694 + AluY SINE Alu 1 304 -7 1425 166 8 12 chr5 54612703 54612978 -145017172 - AluJo SINE Alu 0 312 39 686 184 0 0 chr5 54612978 54613087 -145017063 - AluJo/FLAM SINE Alu -202 110 2 1788 100 114 15 chr5 54613105 54613376 -145016774 + AluY SINE Alu 1 298 -13 224 77 26 0 chr5 54613535 54613574 -145016576 + (CAATT)n Simple_repeat Simple_repeat 4 43 0 232 315 0 0 chr5 54614116 54614170 -145015980 - L2 LINE L2 -12 3260 3207 2041 128 24 0 chr5 54614774 54615071 -145015079 + AluSx SINE Alu 1 304 -8 2187 61 44 3 chr5 54615454 54615750 -145014400 + AluY SINE Alu 1 308 -3 946 121 34 19 chr5 54615750 54616012 -145014138 + GA-rich Low_complexity Low_complexity 2 267 0 384 117 17 0 chr5 54616032 54616092 -145014058 - MER113 DNA MER1_type? -460 61 1 304 213 240 0 chr5 54616754 54616829 -145013321 + MIR SINE MIR 57 149 -113 387 331 61 18 chr5 54616830 54616993 -145013157 + MER91A DNA MER1_type 1 170 -26 477 104 0 0 chr5 54616993 54617060 -145013090 + LTR33A LTR ERVL 457 523 0 705 276 45 5 chr5 54617154 54617375 -145012775 + L2 LINE L2 1778 2007 -1307 2374 240 119 18 chr5 54617381 54618362 -145011788 + L1MC4 LINE L1 4924 5403 -743 1090 187 95 27 chr5 54618435 54618697 -145011453 + L1MC4 LINE L1 7102 7381 -661 808 218 95 126 chr5 54618701 54619268 -145010882 - MLT1H1 LTR MaLR 0 555 3 2837 205 33 16 chr5 54619283 54619766 -145010384 + L1MC4 LINE L1 7405 7890 -152 276 30 0 0 chr5 54619766 54619799 -145010351 + (GA)n Simple_repeat Simple_repeat 1 33 0 2837 205 33 16 chr5 54619799 54619955 -145010195 + L1MC4 LINE L1 7890 8042 0 640 149 44 133 chr5 54619962 54620104 -145010046 + L1MC5 LINE L1 6923 7035 -926 2154 113 0 20 chr5 54620104 54620406 -145009744 + AluSg SINE Alu 3 298 -12 640 149 44 133 chr5 54620406 54620511 -145009639 + L1MC5 LINE L1 7035 7148 -813 1006 205 40 40 chr5 54620531 54620606 -145009544 + MER58A DNA MER1_type 1 75 -2345 1452 171 44 96 chr5 54620606 54620991 -145009159 - MLT1A1 LTR MaLR 0 365 1 1006 205 40 40 chr5 54620991 54621139 -145009011 + MER58A DNA MER1_type 74 224 0 2162 189 34 93 chr5 54621189 54621749 -145008401 + MER119 DNA MER1_type 35 561 -22 1181 212 83 81 chr5 54621903 54622337 -145007813 + L1MC5 LINE L1 7258 7695 -266 1791 156 18 7 chr5 54622337 54622620 -145007530 - AluJb SINE Alu -26 286 1 1181 212 83 81 chr5 54622620 54622656 -145007494 + L1MC5 LINE L1 7695 7729 -232 581 210 10 0 chr5 54622659 54622759 -145007391 + FLAM_A SINE Alu 1 101 -41 1822 160 0 0 chr5 54622964 54623251 -145006899 + AluJb SINE Alu 13 299 -13 4620 163 86 48 chr5 54623262 54624159 -145005991 + MER21A LTR ERV1 1 931 0 439 329 26 74 chr5 54624696 54625076 -145005074 + L2 LINE L2 2268 2629 -685 22 70 0 0 chr5 54625166 54625209 -145004941 + AT_rich Low_complexity Low_complexity 1 43 0 2191 123 3 0 chr5 54625642 54625942 -145004208 - AluSx SINE Alu -7 305 5 1696 125 54 14 chr5 54626028 54626324 -145003826 - AluSx SINE Alu -4 308 1 1206 211 61 78 chr5 54626343 54626871 -145003279 - L1ME LINE L1 -4889 1191 674 2135 111 3 3 chr5 54626871 54627178 -145002972 + AluSq SINE Alu 2 308 -5 1206 211 61 78 chr5 54627178 54627245 -145002905 - L1ME LINE L1 -5406 674 607 1663 291 50 14 chr5 54627497 54628071 -145002079 - L1ME LINE L1 -5464 606 12 781 250 40 4 chr5 54628318 54628566 -145001584 - L1M4 LINE L1 -2734 3910 3654 1137 161 14 32 chr5 54628568 54628785 -145001365 - AluJo SINE Alu -13 299 87 526 196 0 0 chr5 54628801 54628921 -145001229 - L1M4 LINE L1 -2991 3653 3534 2138 145 0 0 chr5 54628921 54629225 -145000925 - AluJb SINE Alu -4 308 5 1111 182 5 20 chr5 54629277 54629480 -145000670 + AluJb SINE Alu 111 310 -2 934 195 40 68 chr5 54629488 54629569 -145000581 - L1M4 LINE L1 -3387 3257 3175 2154 121 18 82 chr5 54629569 54629795 -145000355 - THE1B LTR MaLR 0 364 172 2392 104 3 0 chr5 54629795 54630103 -145000047 + AluSp SINE Alu 1 309 -4 2154 121 18 82 chr5 54630103 54630265 -144999885 - THE1B LTR MaLR -192 172 1 13023 72 4 12 chr5 54630269 54630396 -144999754 - THE1B-int LTR MaLR -4 1576 1449 2007 141 0 10 chr5 54630396 54630694 -144999456 + AluSx SINE Alu 1 295 -17 13023 72 4 12 chr5 54630694 54632155 -144997995 - THE1B-int LTR MaLR -131 1449 1 2174 131 21 46 chr5 54632155 54632528 -144997622 - THE1B LTR MaLR 0 364 1 934 195 40 68 chr5 54632528 54632691 -144997459 - L1M4 LINE L1 -3470 3174 3014 * 3649 212 82 26 chr5 54632685 54633886 -144996264 - L1M4 LINE L1 -4324 2322 957 1902 267 92 27 chr5 54633939 54634647 -144995503 - L1M4 LINE L1 -5728 814 61 482 283 64 32 chr5 54634958 54635145 -144995005 + MIR SINE MIR 6 198 -64 2174 97 4 0 chr5 54635231 54635530 -144994620 - AluSg SINE Alu 0 300 1 1726 136 11 14 chr5 54635556 54635859 -144994291 - AluJo SINE Alu 0 307 6 357 219 0 3 chr5 54637149 54637245 -144992905 - AluJ/FRAM SINE Alu -5 297 228 539 299 20 35 chr5 54637399 54637596 -144992554 - MIR3 SINE MIR -10 198 5 2415 83 0 3 chr5 54637645 54637958 -144992192 - AluSx SINE Alu 0 312 1 2376 86 0 19 chr5 54638051 54638366 -144991784 + AluSc SINE Alu 1 309 0 2133 111 0 20 chr5 54638468 54638766 -144991384 + AluSx SINE Alu 9 300 -12 2361 83 0 16 chr5 54638872 54639185 -144990965 - AluSc SINE Alu -1 308 1 867 215 21 37 chr5 54639364 54639555 -144990595 - AluJo SINE Alu -11 301 114 801 195 150 35 chr5 54640048 54640248 -144989902 + MER58A DNA MER1_type 1 223 -1 984 175 12 0 chr5 54640626 54640786 -144989364 - FRAM SINE Alu -15 161 1 1876 196 3 50 chr5 54640860 54641242 -144988908 - MLT1A1 LTR MaLR 0 365 2 1072 106 0 0 chr5 54641404 54641545 -144988605 - AluSg/x SINE Alu -87 223 83 451 150 0 100 chr5 54641780 54641860 -144988290 + AluJ/FLAM SINE Alu 3 74 -238 862 193 0 18 chr5 54641860 54642026 -144988124 + AluSg/x SINE Alu 135 297 -13 37 0 0 0 chr5 54642106 54642143 -144988007 + AT_rich Low_complexity Low_complexity 1 37 0 2278 88 0 7 chr5 54642960 54643257 -144986893 + AluSg SINE Alu 1 295 -15 230 296 80 11 chr5 54643400 54643488 -144986662 + MIR SINE MIR 32 125 -137 236 54 54 0 chr5 54643490 54643527 -144986623 + CT-rich Low_complexity Low_complexity 2 40 0 609 270 168 18 chr5 54643969 54644195 -144985955 - MIR SINE MIR 0 262 3 1435 184 0 57 chr5 54644784 54645100 -144985050 - AluJo SINE Alu -14 298 1 214 237 0 0 chr5 54645710 54645748 -144984402 + MIR SINE MIR 86 123 -85 1976 145 10 10 chr5 54646409 54646705 -144983445 + AluJb SINE Alu 1 296 -16 201 311 156 7 chr5 54646721 54646856 -144983294 - MIR SINE MIR -59 203 49 700 162 113 7 chr5 54647047 54647189 -144982961 + MIR SINE MIR 1 157 -105 317 212 61 0 chr5 54647248 54647314 -144982836 - MER20 DNA MER1_type -84 135 66 1527 197 100 204 chr5 54647361 54647779 -144982371 - L2 LINE L2 -630 2684 2219 955 146 87 27 chr5 54647779 54647964 -144982186 + MER3 DNA MER1_type 12 207 -2 1527 197 100 204 chr5 54647964 54648329 -144981821 - L2 LINE L2 -1095 2219 1818 1966 148 0 19 chr5 54648593 54648910 -144981240 - AluSx SINE Alu -1 311 1 962 289 81 26 chr5 54648993 54649574 -144980576 - L1MEd LINE L1 -4931 1188 576 2132 130 3 3 chr5 54649694 54649995 -144980155 - AluSx SINE Alu -11 301 1 1540 176 13 36 chr5 54649997 54650299 -144979851 - AluJo SINE Alu 0 312 18 30 27 0 0 chr5 54650924 54650961 -144979189 + AT_rich Low_complexity Low_complexity 1 37 0 189 0 0 0 chr5 54651291 54651312 -144978838 + (T)n Simple_repeat Simple_repeat 1 21 0 370 339 16 0 chr5 54651380 54651501 -144978649 - L2 LINE L2 -4 3309 3187 7805 23 0 209 chr5 54651685 54653021 -144977129 + SVA Other Other 327 1383 -3 395 225 78 35 chr5 54653095 54653237 -144976913 - HsTC2a DNA Tc2 -4 738 591 2016 136 4 0 chr5 54653238 54653517 -144976633 + AluSx SINE Alu 1 280 -32 414 186 0 0 chr5 54653517 54653603 -144976547 + G-rich Low_complexity Low_complexity 5 90 0 1489 207 107 49 chr5 54653616 54654066 -144976084 - HsTC2a DNA Tc2 -143 601 126 1674 193 0 23 chr5 54654066 54654372 -144975778 - AluJo SINE Alu -13 299 1 838 158 0 0 chr5 54654385 54654512 -144975638 - FLAM_C SINE Alu -16 127 1 566 285 121 10 chr5 54654744 54655049 -144975101 + L1MC4a LINE L1 5621 5959 -1849 698 140 0 0 chr5 54657999 54658106 -144972044 + FLAM_C SINE Alu 1 107 -36 436 145 36 12 chr5 54658420 54658503 -144971647 - Tigger5 DNA MER2_type -2 2321 2237 324 189 0 0 chr5 54658512 54658565 -144971585 - Tigger5 DNA MER2_type -2267 56 4 693 184 72 5 chr5 54659377 54659600 -144970550 + MER20B DNA MER1_type 514 751 -32 2456 50 7 3 chr5 54659611 54659910 -144970240 + AluY SINE Alu 1 300 -11 1119 151 80 12 chr5 54659926 54659945 -144970205 + L1MB7 LINE L1 5528 5544 -640 7189 143 30 6 chr5 54659945 54660294 -144969856 + L1PA12 LINE L1 4066 4405 -1763 2084 104 11 0 chr5 54660294 54660611 -144969539 + AluY SINE Alu 1 320 0 7189 143 30 6 chr5 54660611 54660839 -144969311 + L1PA12 LINE L1 4405 4626 -1542 2432 31 41 0 chr5 54660839 54661133 -144969017 - AluY SINE Alu -5 306 1 7189 143 30 6 chr5 54661133 54662664 -144967486 + L1PA12 LINE L1 4626 6168 0 1119 151 80 12 chr5 54662664 54663111 -144967039 + L1MB7 LINE L1 5544 6097 -87 2286 116 0 0 chr5 54663337 54663638 -144966512 + AluSx SINE Alu 1 301 -11 262 243 63 16 chr5 54664396 54664776 -144965374 + L1ME4a LINE L1 5645 6048 -73 910 185 0 0 chr5 54664932 54665083 -144965067 + FAM SINE Alu 24 174 -11 302 239 0 9 chr5 54665243 54665352 -144964798 + CT-rich Low_complexity Low_complexity 3 110 0 191 321 277 9 chr5 54665362 54665474 -144964676 - L2 LINE L2 -10 3262 3121 1250 206 95 0 chr5 54665523 54665785 -144964365 - AluJo SINE Alu -25 287 1 867 170 65 91 chr5 54666287 54666517 -144963633 - MER58A DNA MER1_type 0 224 1 503 286 56 16 chr5 54667019 54667271 -144962879 - L1ME LINE L1 -383 5738 5477 914 192 176 46 chr5 54667621 54667944 -144962206 - MLT1A1 LTR MaLR 0 365 1 2128 127 6 16 chr5 54669337 54669651 -144960499 + AluJo SINE Alu 1 311 -1 271 250 0 23 chr5 54669656 54669744 -144960406 - Charlie7 DNA MER1_type -484 2128 2043 2113 121 10 7 chr5 54669860 54670158 -144959992 + AluSx SINE Alu 1 299 -13 347 0 0 23 chr5 54670326 54670370 -144959780 + (CA)n Simple_repeat Simple_repeat 2 44 0 1331 174 71 44 chr5 54670468 54670762 -144959388 + AluJo SINE Alu 1 302 -10 24 67 0 0 chr5 54670996 54671041 -144959109 + AT_rich Low_complexity Low_complexity 1 45 0 1331 201 93 45 chr5 54671255 54671698 -144958452 - Charlie7 DNA MER1_type -619 1993 1530 364 278 77 91 chr5 54671745 54671829 -144958321 - L1ME3A LINE L1 0 6170 6086 1579 178 20 46 chr5 54671829 54672133 -144958017 + AluJo SINE Alu 11 306 -6 364 278 77 91 chr5 54672133 54672257 -144957893 - L1ME3A LINE L1 -84 6086 5965 1668 222 23 13 chr5 54673603 54673995 -144956155 - MSTD LTR MaLR 0 396 1 2348 113 0 0 chr5 54674286 54674588 -144955562 + AluSx SINE Alu 1 302 -10 1620 152 10 59 chr5 54676146 54676436 -144953714 + AluJb SINE Alu 1 276 -36 1969 109 33 0 chr5 54676441 54676717 -144953433 - AluSg SINE Alu -21 289 5 325 48 0 0 chr5 54676717 54676759 -144953391 - AluY SINE Alu -260 42 1 227 167 24 0 chr5 54676876 54676918 -144953232 - MER58 DNA MER1_type -24 2396 2354 37 0 0 0 chr5 54676945 54676982 -144953168 + AT_rich Low_complexity Low_complexity 1 37 0 396 55 0 0 chr5 54679416 54679471 -144950679 + (TAA)n Simple_repeat Simple_repeat 1 55 0 23 33 0 0 chr5 54681016 54681046 -144949104 + AT_rich Low_complexity Low_complexity 1 30 0 212 304 45 18 chr5 54681513 54681625 -144948525 - MIR SINE MIR -6 256 142 2383 54 3 13 chr5 54682308 54682606 -144947544 + AluY SINE Alu 1 295 -16 629 242 8 0 chr5 54684043 54684175 -144945975 + FLAM_A SINE Alu 1 133 0 1832 160 7 3 chr5 54684378 54684666 -144945484 - AluJb SINE Alu -3 309 21 650 171 9 0 chr5 54684720 54684859 -144945291 + AluSg/x SINE Alu 176 315 0 307 298 177 0 chr5 54684860 54685001 -144945149 + L1 LINE L1 3613 3778 -2368 16896 28 0 0 chr5 54685201 54688014 -144942136 + L1PA3 LINE L1 3334 6153 -2 3021 43 13 0 chr5 54688014 54688384 -144941766 + L1PA5 LINE L1 5773 6151 -3 1251 235 47 92 chr5 54688744 54689517 -144940633 + LTR49-int LTR ERV1 3323 4060 -876 263 164 16 16 chr5 54689528 54689589 -144940561 + LTR49-int LTR ERV1 5361 5421 -910 491 231 70 57 chr5 54689854 54689988 -144940162 + LTR37A LTR ERV1 127 267 -159 1180 111 29 98 chr5 54689988 54690232 -144939918 + MER30 DNA MER1_type 4 230 0 491 231 70 57 chr5 54690232 54690326 -144939824 + LTR37A LTR ERV1 267 358 -68 2457 79 0 3 chr5 54690715 54691018 -144939132 + AluY SINE Alu 1 302 -9 546 256 143 58 chr5 54691294 54691918 -144938232 - L1M4 LINE L1 -2311 4071 3395 270 0 0 0 chr5 54691919 54691949 -144938201 + (A)n Simple_repeat Simple_repeat 1 30 0 1442 173 12 24 chr5 54691958 54692206 -144937944 - AluJo SINE Alu -31 281 37 470 257 51 56 chr5 54692357 54692571 -144937579 - L1M4 LINE L1 -3201 3181 2969 24 61 0 0 chr5 54692932 54692965 -144937185 + AT_rich Low_complexity Low_complexity 1 33 0 627 204 145 7 chr5 54793455 54793607 -144836543 - MER45A DNA AcHobo -5 173 1 1830 201 49 0 chr5 54794614 54794962 -144835188 - MLT1A1 LTR MaLR 0 365 1 1595 240 59 42 chr5 54795109 54795705 -144834445 - L1M4 LINE L1 -4551 1833 1228 186 43 0 0 chr5 54795715 54795738 -144834412 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 9925 61 13 79 chr5 54795743 54797204 -144832946 - SVA Other Other -17 1369 6 495 176 22 0 chr5 54797323 54797414 -144832736 - L1PA12 LINE L1 -6751 830 738 333 214 127 48 chr5 54797665 54797791 -144832359 - MER103 DNA DNA -2 164 29 315 0 0 0 chr5 54797812 54797847 -144832303 + (TA)n Simple_repeat Simple_repeat 1 35 0 198 0 0 0 chr5 54797847 54797869 -144832281 + (T)n Simple_repeat Simple_repeat 1 22 0 189 0 0 0 chr5 54800122 54800143 -144830007 + (A)n Simple_repeat Simple_repeat 1 21 0 315 0 0 0 chr5 54800143 54800178 -144829972 + (TA)n Simple_repeat Simple_repeat 1 35 0 407 191 127 48 chr5 54800199 54800325 -144829825 + MER103 DNA DNA 29 164 -2 11908 159 36 2 chr5 54800576 54804042 -144826108 + L1PA14 LINE L1 1278 4866 -2718 9086 163 5 2 chr5 54804049 54804673 -144825477 + L1PA14 LINE L1 5146 5767 -1832 2645 24 0 0 chr5 54804673 54804964 -144825186 + AluYb8 SINE Alu 28 318 0 9086 163 5 2 chr5 54804964 54805830 -144824320 + L1PA14 LINE L1 5767 6629 -970 2401 74 6 13 chr5 54805830 54806142 -144824008 + AluY SINE Alu 1 310 -1 9086 163 5 2 chr5 54806142 54807079 -144823071 + L1PA14 LINE L1 6629 7580 -19 315 161 0 0 chr5 54808195 54808251 -144821899 + L1MB2 LINE L1 5936 5991 -180 28 71 0 0 chr5 54808796 54808852 -144821298 + AT_rich Low_complexity Low_complexity 1 56 0 850 276 197 30 chr5 54810921 54810994 -144819156 - L3 LINE CR1 -287 1290 1231 2476 79 0 0 chr5 54810994 54811299 -144818851 + AluSq SINE Alu 1 305 -8 850 276 197 30 chr5 54811299 54811757 -144818393 - L3 LINE CR1 -346 1231 670 258 136 0 0 chr5 54813020 54813064 -144817086 + (T)n Simple_repeat Simple_repeat 1 44 0 232 143 0 0 chr5 54813498 54813533 -144816617 + Alu SINE Alu 273 307 -13 671 281 109 0 chr5 54813778 54813988 -144816162 - MIR SINE MIR 0 262 30 1408 184 24 20 chr5 54814001 54814294 -144815856 - MER33 DNA MER1_type -14 310 17 254 280 176 8 chr5 54814425 54814550 -144815600 - MER91A DNA MER1_type -1 195 50 1555 244 31 58 chr5 54815458 54815942 -144814208 + L1ME3A LINE L1 5504 5975 -195 2443 57 30 0 chr5 54816016 54816317 -144813833 - AluY SINE Alu -1 310 1 274 287 43 0 chr5 54816358 54816452 -144813698 + MER112 DNA MER1_type 157 254 -6 1449 142 98 33 chr5 54816633 54816908 -144813242 + MSTA LTR MaLR 136 428 0 255 164 211 39 chr5 54816915 54817019 -144813131 - L1M4 LINE L1 -1506 4640 4519 216 0 0 0 chr5 54817162 54817186 -144812964 + (T)n Simple_repeat Simple_repeat 1 24 0 2559 123 65 4 chr5 54817584 54818011 -144812139 - MER1A DNA MER1_type 0 529 2 1154 246 122 25 chr5 54818223 54818675 -144811475 + MLT1F1 LTR MaLR 1 489 -78 735 286 65 33 chr5 54818716 54818961 -144811189 - MIR SINE MIR -2 260 8 1330 274 94 11 chr5 54819650 54820171 -144809979 - L1ME4a LINE L1 -265 5856 5293 2276 96 7 0 chr5 54820776 54821069 -144809081 - AluSg SINE Alu -15 295 1 447 227 86 29 chr5 54821073 54821218 -144808932 - MIR SINE MIR -71 191 40 1418 267 120 17 chr5 54822555 54823070 -144807080 + L2 LINE L2 2742 3313 0 471 283 9 0 chr5 54824887 54825000 -144805150 + L2 LINE L2 3200 3313 0 547 244 88 44 chr5 54825147 54825352 -144804798 + L1ME3A LINE L1 5948 6161 -9 557 306 32 0 chr5 54825368 54825554 -144804596 + MIR SINE MIR 32 223 -39 487 326 6 66 chr5 54825815 54825859 -144804291 - MIR3 SINE MIR -9 199 154 1038 196 0 46 chr5 54825859 54826078 -144804072 - MER3 DNA MER1_type 0 209 1 487 326 6 66 chr5 54826078 54826214 -144803936 - MIR3 SINE MIR -54 154 30 232 267 0 17 chr5 54826477 54826537 -144803613 - MIR SINE MIR 0 262 204 403 250 125 0 chr5 54826648 54826768 -144803382 - MIR SINE MIR -127 135 1 1425 81 106 205 chr5 54831941 54832263 -144797887 - AluSx SINE Alu -8 294 5 934 266 75 33 chr5 54832992 54833114 -144797036 - L1ME4a LINE L1 -105 6016 5901 2359 95 0 3 chr5 54833114 54833418 -144796732 - AluSg SINE Alu -7 303 1 934 266 75 33 chr5 54833418 54833750 -144796400 - L1ME4a LINE L1 -220 5901 5543 487 302 28 28 chr5 54837003 54837182 -144792968 + MIR3 SINE MIR 3 181 -27 210 143 0 0 chr5 54837977 54838012 -144792138 + (T)n Simple_repeat Simple_repeat 1 35 0 747 187 15 0 chr5 54838012 54838146 -144792004 - MER47A DNA MER2_type -190 176 41 22 0 0 0 chr5 54838180 54838202 -144791948 + AT_rich Low_complexity Low_complexity 1 22 0 444 281 129 24 chr5 54838264 54838474 -144791676 + MIR SINE MIR 31 262 0 282 295 151 36 chr5 54839009 54839148 -144791002 - MIR SINE MIR -45 217 63 400 219 67 50 chr5 54839250 54839369 -144790781 - MER5B DNA MER1_type -57 121 1 186 359 19 0 chr5 54840405 54840511 -144789639 - MIR SINE MIR -2 260 153 436 313 157 8 chr5 54840512 54840761 -144789389 - MLT1L LTR MaLR 0 615 330 341 240 93 23 chr5 54840789 54840918 -144789232 - MLT1L LTR MaLR -343 272 135 518 280 60 13 chr5 54841173 54841323 -144788827 - MIR SINE MIR -105 157 1 195 114 0 0 chr5 54841343 54841378 -144788772 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 303 330 10 0 chr5 54841511 54841608 -144788542 + MIR3 SINE MIR 110 207 -1 23 0 0 0 chr5 54842476 54842499 -144787651 + AT_rich Low_complexity Low_complexity 1 23 0 225 0 0 0 chr5 54842757 54842782 -144787368 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 450 0 0 0 chr5 54842781 54842831 -144787319 + (CA)n Simple_repeat Simple_repeat 1 50 0 407 326 48 20 chr5 54843650 54843797 -144786353 + MIR3 SINE MIR 19 169 -39 293 309 0 0 chr5 54844877 54844971 -144785179 + MER117 DNA MER1_type 100 193 -4 225 0 0 0 chr5 54845036 54845061 -144785089 + (TG)n Simple_repeat Simple_repeat 1 25 0 964 182 29 0 chr5 54845085 54845255 -144784895 - MER5A DNA MER1_type -1 188 14 1238 198 66 66 chr5 54845769 54846027 -144784123 - L1MB7 LINE L1 0 6184 5924 2504 4 0 0 chr5 54846027 54846294 -144783856 + AluYa5 SINE Alu 40 306 -5 1238 198 66 66 chr5 54846294 54846398 -144783752 - L1MB7 LINE L1 -259 5925 5822 296 202 395 0 chr5 54846487 54846616 -144783534 + MER5A DNA MER1_type 9 188 -1 196 229 21 21 chr5 54846734 54846782 -144783368 - MIR SINE MIR -74 134 87 2274 88 0 17 chr5 54847170 54847467 -144782683 - AluSq SINE Alu -21 292 1 1663 170 28 7 chr5 54847476 54847759 -144782391 - AluJb SINE Alu -23 289 1 469 245 89 85 chr5 54848149 54848385 -144781765 - MIR SINE MIR -4 258 19 2011 199 122 55 chr5 54849168 54849751 -144780399 - MLT1E3 LTR MaLR 0 624 3 499 271 42 21 chr5 54849907 54850051 -144780099 - MIR3 SINE MIR -45 163 17 308 267 20 0 chr5 54850851 54850952 -144779198 + (TA)n Simple_repeat Simple_repeat 2 104 0 25 75 0 0 chr5 54850967 54851020 -144779130 + AT_rich Low_complexity Low_complexity 1 53 0 365 304 137 6 chr5 54851428 54851589 -144778561 - MIR SINE MIR -60 202 21 2456 81 3 0 chr5 54852253 54852563 -144777587 + AluSp SINE Alu 1 311 -2 198 356 37 30 chr5 54852998 54853133 -144777017 - L2 LINE L2 -426 2888 2753 582 215 0 0 chr5 54853512 54853619 -144776531 + MLT1D LTR MaLR 1 107 -398 * 1273 177 27 0 chr5 54853609 54853829 -144776321 + MLT1D LTR MaLR 280 505 0 489 309 101 24 chr5 54853913 54854120 -144776030 + MIR SINE MIR 21 243 -19 349 334 63 13 chr5 54855031 54855223 -144774927 - MIR3 SINE MIR -6 202 1 271 274 114 32 chr5 54855581 54855668 -144774482 - MIR3 SINE MIR -21 187 77 1237 177 5 5 chr5 54855668 54855877 -144774273 + MER3 DNA MER1_type 1 209 0 271 274 114 32 chr5 54855877 54855929 -144774221 - MIR3 SINE MIR -131 77 31 228 219 82 27 chr5 54856164 54856237 -144773913 - L2 LINE L2 0 3272 3196 225 348 201 16 chr5 54857006 54857523 -144772627 - L2 LINE L2 -338 2976 2364 753 314 66 25 chr5 54857817 54858312 -144771838 - L2 LINE L2 -35 3278 2763 187 305 224 11 chr5 54858344 54858518 -144771632 - L2 LINE L2 -1357 1957 1747 256 129 97 113 chr5 54859542 54859604 -144770546 + MLT1D LTR MaLR 1 61 -444 2755 87 0 3 chr5 54859609 54859979 -144770171 - L1PB1 LINE L1 0 6151 5783 370 232 0 53 chr5 54860038 54860133 -144770017 - L1MC4 LINE L1 -1339 6703 6614 * 374 294 0 0 chr5 54860081 54860166 -144769984 + L1MC4 LINE L1 6614 6698 -1344 553 149 0 0 chr5 54860166 54860253 -144769897 - L1P5 LINE L1 -360 5791 5705 2035 207 63 7 chr5 54860253 54860679 -144769471 + MLT1D LTR MaLR 56 505 0 181 229 0 0 chr5 54860686 54860721 -144769429 - MER5B DNA MER1_type -139 39 5 478 200 248 0 chr5 54860741 54860886 -144769264 + MER5A DNA MER1_type 9 189 0 1856 139 3 3 chr5 54861025 54861313 -144768837 + AluJb SINE Alu 6 293 -19 462 267 44 59 chr5 54861384 54861519 -144768631 - MER5A DNA MER1_type -22 160 24 219 88 0 0 chr5 54861876 54861910 -144768240 + (CCCTG)n Simple_repeat Simple_repeat 2 35 0 475 301 72 6 chr5 54862200 54862366 -144767784 + MIR SINE MIR 48 224 -38 878 156 202 23 chr5 54862674 54862892 -144767258 + LTR37B LTR ERV1 198 454 -14 302 379 76 14 chr5 54863143 54863288 -144766862 + L2 LINE L2 3118 3271 -1 257 286 226 0 chr5 54863307 54863440 -144766710 + MER5A DNA MER1_type 9 171 -18 523 241 161 6 chr5 54865361 54865523 -144764627 - MIR SINE MIR -73 189 3 207 0 0 0 chr5 54865570 54865593 -144764557 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 386 306 206 0 chr5 54866726 54866935 -144763215 + MIR SINE MIR 5 256 -6 2161 101 0 0 chr5 54867004 54867300 -144762850 - AluSg SINE Alu -14 296 1 449 328 52 17 chr5 54868873 54869072 -144761078 - MIR SINE MIR -57 205 3 309 333 87 59 chr5 54869575 54869896 -144760254 + L2 LINE L2 2922 3251 -21 942 346 20 15 chr5 54869960 54870359 -144759791 - MER115 DNA AcHobo -253 440 40 280 91 0 36 chr5 54870516 54870571 -144759579 + (GA)n Simple_repeat Simple_repeat 1 53 0 513 321 148 44 chr5 54870579 54871225 -144758925 - L2 LINE L2 -818 2496 1744 186 43 0 0 chr5 54871225 54871248 -144758902 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 513 321 148 44 chr5 54871248 54871423 -144758727 - L2 LINE L2 -1570 1744 1589 1541 237 40 16 chr5 54871424 54871849 -144758301 - LTR16A LTR ERVL 0 450 16 773 234 35 72 chr5 54871849 54872139 -144758011 - MLT2C1 LTR ERVL 0 397 119 231 211 144 19 chr5 54874032 54874136 -144756014 + MIR SINE MIR 28 144 -118 2463 161 26 2 chr5 54874373 54874795 -144755355 - MSTB1 LTR MaLR 0 432 1 438 245 178 29 chr5 54874933 54875174 -144754976 + MARNA DNA Mariner 148 424 -162 313 254 166 57 chr5 54875194 54875393 -144754757 + MIR SINE MIR 2 218 -44 1036 239 18 9 chr5 54875483 54875709 -144754441 - MIR SINE MIR -1 261 34 210 156 0 0 chr5 54875790 54875835 -144754315 + (TG)n Simple_repeat Simple_repeat 1 45 0 200 212 167 0 chr5 54876150 54876216 -144753934 - MIR SINE MIR -111 151 75 288 0 0 0 chr5 54876839 54876871 -144753279 + (TA)n Simple_repeat Simple_repeat 2 33 0 180 0 0 0 chr5 54876871 54876891 -144753259 + (T)n Simple_repeat Simple_repeat 1 20 0 21 71 0 0 chr5 54877153 54877195 -144752955 + AT_rich Low_complexity Low_complexity 1 42 0 1563 228 59 66 chr5 54877299 54877860 -144752290 + LTR67 LTR ERVL 1 557 0 440 273 56 27 chr5 54879017 54879261 -144750889 - MLT1L LTR MaLR -5 610 320 216 0 0 0 chr5 54879261 54879285 -144750865 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 440 273 56 27 chr5 54879285 54879388 -144750762 - MLT1L LTR MaLR -295 320 221 197 284 68 0 chr5 54880379 54880453 -144749697 - L3 LINE CR1 -469 1108 1030 500 170 28 47 chr5 54880738 54880844 -144749306 + MIR SINE MIR 116 219 -43 222 303 9 83 chr5 54881492 54881601 -144748549 - MIR SINE MIR -110 152 52 2152 91 0 20 chr5 54881689 54881987 -144748163 + AluSg SINE Alu 1 292 -18 464 313 39 63 chr5 54882763 54883047 -144747103 - L3 LINE CR1 -4 1573 1297 694 267 112 0 chr5 54883048 54883280 -144746870 + MIR SINE MIR 2 259 -3 1931 88 0 27 chr5 54883309 54883571 -144746579 - AluSc SINE Alu -19 290 36 301 317 130 0 chr5 54883602 54883725 -144746425 + MER117 DNA MER1_type 55 193 -4 181 237 97 65 chr5 54883730 54883823 -144746327 - L3 LINE CR1 -286 1291 1196 216 308 68 68 chr5 54884620 54884658 -144745492 + MIR3 SINE MIR 9 46 -162 1768 182 48 24 chr5 54884658 54885037 -144745113 + MLT1B LTR MaLR 1 388 -2 216 308 68 68 chr5 54885037 54885115 -144745035 + MIR3 SINE MIR 45 125 -83 190 270 20 100 chr5 54885554 54885654 -144744496 - MIR3 SINE MIR 0 208 117 286 361 14 25 chr5 54885856 54886019 -144744131 - MIR3 SINE MIR -20 188 25 243 0 0 0 chr5 54887791 54887818 -144742332 + (A)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr5 54887856 54887878 -144742272 + AT_rich Low_complexity Low_complexity 1 22 0 877 239 0 5 chr5 54887983 54888167 -144741983 + MER69 DNA AcHobo 24 206 -2320 353 238 89 0 chr5 54888243 54888344 -144741806 + MER69 DNA AcHobo 2407 2516 -10 256 274 14 14 chr5 54889313 54889386 -144740764 + MIR3 SINE MIR 87 159 -49 603 255 138 21 chr5 54889610 54889849 -144740301 + MLT1I LTR MaLR 112 378 -31 4887 122 130 78 chr5 54889849 54891154 -144738996 + pTR5 LTR ERV1 745 2438 0 2095 100 17 0 chr5 54891276 54891565 -144738585 - AluSg SINE Alu -16 294 1 1315 260 67 35 chr5 54892799 54893368 -144736782 - L1MC4a LINE L1 -1748 6060 5474 228 287 74 28 chr5 54893368 54893476 -144736674 - L1MC4a LINE L1 -2276 5532 5420 * 519 264 43 6 chr5 54893465 54893628 -144736522 - L1ME3A LINE L1 0 6170 6002 301 233 105 23 chr5 54893720 54893853 -144736297 - L1MC4a LINE L1 -2409 5399 5256 190 222 22 22 chr5 54895150 54895195 -144734955 - MIR SINE MIR -200 62 18 237 246 100 77 chr5 54896285 54896415 -144733735 - MLT1L LTR MaLR -221 394 262 2437 179 24 18 chr5 54896439 54896896 -144733254 + MER66B LTR ERV1 27 486 0 266 330 52 62 chr5 54896929 54897123 -144733027 - MLT1L LTR MaLR -403 212 21 261 303 25 66 chr5 54898201 54898323 -144731827 + L2 LINE L2 3197 3313 0 488 309 111 14 chr5 54898774 54898990 -144731160 + MIR SINE MIR 15 243 -19 22 56 0 0 chr5 54899375 54899411 -144730739 + AT_rich Low_complexity Low_complexity 1 36 0 576 290 100 16 chr5 54899459 54899689 -144730461 + MIR SINE MIR 2 251 -11 912 260 27 0 chr5 54899797 54900016 -144730134 - MIR SINE MIR -25 237 13 4299 138 53 65 chr5 54900129 54901444 -144728706 - pTR5 LTR ERV1 0 2606 1524 406 209 33 0 chr5 54901728 54901819 -144728331 + MIR SINE MIR 107 200 -62 2587 98 35 19 chr5 54901882 54902251 -144727899 + THE1C LTR MaLR 1 375 0 233 273 109 79 chr5 54902533 54902707 -144727443 + MIR3 SINE MIR 10 181 -27 750 281 17 43 chr5 54903313 54903548 -144726602 + MIR SINE MIR 33 261 -1 185 206 0 16 chr5 54903826 54903889 -144726261 + (CAT)n Simple_repeat Simple_repeat 1 62 0 1860 139 14 76 chr5 54903895 54904262 -144725888 - L1MB5 LINE L1 -286 5888 5545 21 0 0 0 chr5 54905232 54905253 -144724897 + AT_rich Low_complexity Low_complexity 1 21 0 4977 103 61 33 chr5 54905253 54906095 -144724055 - L1PA16 LINE L1 -9 6157 5293 1833 126 0 0 chr5 54906158 54906428 -144723722 + AluSx SINE Alu 30 299 -13 33 43 0 0 chr5 54907891 54907938 -144722212 + GC_rich Low_complexity Low_complexity 1 47 0 1683 206 19 32 chr5 54908289 54908668 -144721482 + MLT1A2 LTR MaLR 1 374 0 1890 155 18 0 chr5 54909146 54909451 -144720699 - AluSx SINE Alu 0 310 1 27 87 0 0 chr5 54909546 54909615 -144720535 + AT_rich Low_complexity Low_complexity 1 69 0 431 294 118 13 chr5 54909621 54909849 -144720301 - MIR SINE MIR -10 252 1 1830 96 0 0 chr5 54910275 54910524 -144719626 - AluY SINE Alu -13 298 50 1340 224 132 11 chr5 54911766 54912114 -144718036 + MER34 LTR ERV1 11 400 -142 1996 58 109 4 chr5 54912118 54912393 -144717757 - L1PA4 LINE L1 0 6155 5852 1100 30 8 0 chr5 54912393 54912525 -144717625 + L1PA4 LINE L1 5725 5857 -298 693 189 91 0 chr5 54912525 54912668 -144717482 + MER34 LTR ERV1 384 539 -3 234 91 0 0 chr5 54913834 54913867 -144716283 + (CA)n Simple_repeat Simple_repeat 1 33 0 2574 158 36 2 chr5 54913931 54914380 -144715770 + L1MB2 LINE L1 5707 6170 -1 624 158 53 0 chr5 54914549 54914663 -144715487 + L1MB2 LINE L1 6049 6168 -3 2317 112 0 13 chr5 54914835 54915014 -144715136 - AluSx SINE Alu 0 312 137 2482 75 0 13 chr5 54915014 54915321 -144714829 - AluY SINE Alu -8 303 1 2317 112 0 13 chr5 54915321 54915455 -144714695 - AluSx SINE Alu -175 137 3 499 279 132 11 chr5 54915796 54915986 -144714164 + MLT1J2 LTR MaLR 204 416 -34 2100 111 0 0 chr5 54916444 54916735 -144713415 + AluSg SINE Alu 11 301 0 392 304 97 10 chr5 54917082 54917371 -144712779 + L2 LINE L2 2739 3055 -258 399 303 64 32 chr5 54917596 54917847 -144712303 + LTR16C LTR ERVL 197 455 -36 379 242 71 50 chr5 54917908 54918106 -144712044 + L2 LINE L2 3112 3313 0 760 279 67 4 chr5 54918167 54918407 -144711743 + MIR SINE MIR 2 256 -6 273 301 228 0 chr5 54919629 54919765 -144710385 + MIR3 SINE MIR 26 192 -16 269 263 25 0 chr5 54920093 54920173 -144709977 + (TA)n Simple_repeat Simple_repeat 1 82 0 573 225 80 0 chr5 54921023 54921174 -144708976 + MIR SINE MIR 84 246 -16 971 286 94 11 chr5 54921261 54921624 -144708526 + LTR16C LTR ERVL 99 491 0 207 179 0 75 chr5 54921820 54921887 -144708263 + (CATA)n Simple_repeat Simple_repeat 1 62 0 3273 177 34 61 chr5 54922478 54923253 -144706897 + Tigger6a DNA MER2_type 24 777 -306 1599 216 92 25 chr5 54923261 54923705 -144706445 + MER74B LTR ERVL 56 529 -93 1436 164 45 35 chr5 54923765 54924021 -144706129 + Tigger6a DNA MER2_type 769 1021 -576 269 26 0 26 chr5 54924021 54924060 -144706090 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1902 148 0 11 chr5 54924062 54924345 -144705805 - AluJb SINE Alu -32 280 1 1436 164 45 35 chr5 54924345 54924397 -144705753 + Tigger6a DNA MER2_type 1021 1083 0 363 324 130 5 chr5 54924421 54924637 -144705513 + MIR SINE MIR 7 249 -13 270 324 10 20 chr5 54924636 54924738 -144705412 + L2 LINE L2 3199 3299 -14 * 704 273 55 49 chr5 54925103 54925393 -144704757 + L1ME LINE L1 5392 5686 -435 2283 105 10 0 chr5 54925393 54925698 -144704452 - AluSq SINE Alu -5 308 1 704 273 55 49 chr5 54925698 54925773 -144704377 + L1ME LINE L1 5686 5759 -362 328 278 146 13 chr5 54925932 54926083 -144704067 - MIR SINE MIR -3 259 89 891 217 66 9 chr5 54928082 54928294 -144701856 - MER58A DNA MER1_type 0 224 1 228 274 0 14 chr5 54928379 54928452 -144701698 - MLT1L LTR MaLR -77 538 467 216 200 22 0 chr5 54928724 54928769 -144701381 + L2 LINE L2 3267 3312 -1 652 128 8 8 chr5 54928811 54928936 -144701214 + (GGAA)n Simple_repeat Simple_repeat 2 126 0 1849 105 0 20 chr5 54930525 54930806 -144699344 + AluSx SINE Alu 40 315 0 257 386 51 11 chr5 54932881 54933057 -144697093 + MIR3 SINE MIR 15 197 -11 935 230 15 5 chr5 54933832 54934028 -144696122 + MER58B DNA MER1_type 1 198 -143 1957 221 94 36 chr5 54934028 54934633 -144695517 + MLT1E1 LTR MaLR 1 640 -14 565 218 21 28 chr5 54934641 54934783 -144695367 + MER58B DNA MER1_type 191 331 -10 195 42 0 0 chr5 54935413 54935437 -144694713 + (CA)n Simple_repeat Simple_repeat 1 24 0 721 181 8 15 chr5 54935451 54935584 -144694566 + FRAM SINE Alu 40 171 -5 1738 212 28 51 chr5 54935665 54936136 -144694014 - MLT1C LTR MaLR -7 460 1 220 292 88 44 chr5 54936571 54936684 -144693466 + MIR SINE MIR 68 185 -77 376 299 47 24 chr5 54937931 54938058 -144692092 - L2 LINE L2 0 3272 3143 370 275 137 60 chr5 54938912 54939145 -144691005 + MLT1L LTR MaLR 204 454 -161 850 189 9 60 chr5 54939149 54939366 -144690784 - L2 LINE L2 0 3313 3108 388 160 35 132 chr5 54939378 54939522 -144690628 - L2 LINE L2 -506 2808 2679 396 258 56 66 chr5 54939522 54939720 -144690430 + MLT1L LTR MaLR 420 615 0 252 385 33 0 chr5 54939735 54939826 -144690324 - L2 LINE L2 -18 3254 3161 313 250 266 0 chr5 54940810 54940934 -144689216 - MIR SINE MIR -57 205 49 400 274 18 0 chr5 54941623 54941736 -144688414 - MIR3 SINE MIR -34 174 60 287 285 46 15 chr5 54941977 54942107 -144688043 + L1MC/D LINE L1 5716 5849 -1959 24 0 0 0 chr5 54942107 54942131 -144688019 + AT_rich Low_complexity Low_complexity 1 24 0 2311 111 0 3 chr5 54942131 54942437 -144687713 - AluSx SINE Alu -7 305 1 195 129 0 0 chr5 54942866 54942897 -144687253 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 322 282 73 8 chr5 54942947 54943071 -144687079 + LTR67 LTR ERVL 424 555 -2 315 278 126 20 chr5 54943653 54943804 -144686346 + LTR67 LTR ERVL 99 265 -292 1928 263 58 17 chr5 54943979 54944844 -144685306 - L1 LINE L1 -3097 3049 2110 1682 176 58 39 chr5 54944943 54945306 -144684844 + MLT1A2 LTR MaLR 5 374 0 312 344 34 18 chr5 54945349 54945733 -144684417 + L1MC4a LINE L1 5609 5998 -1810 260 300 20 20 chr5 54946970 54947070 -144683080 + MIR3 SINE MIR 63 162 -46 270 306 130 0 chr5 54947225 54947333 -144682817 - L2 LINE L2 0 3313 3192 181 286 0 18 chr5 54947342 54947398 -144682752 + MIR3 SINE MIR 151 205 -3 759 259 24 5 chr5 54947484 54947689 -144682461 + MIR SINE MIR 18 226 -36 217 311 0 0 chr5 54947914 54947975 -144682175 + L2 LINE L2 3252 3312 -1 2062 140 17 42 chr5 54948204 54948529 -144681621 + MER7A DNA MER2_type 1 316 -2722 2250 116 3 0 chr5 54948529 54948840 -144681310 + AluSx SINE Alu 1 312 0 2062 140 17 42 chr5 54948840 54948871 -144681279 + MER7A DNA MER2_type 316 346 0 228 275 29 43 chr5 54949131 54949200 -144680950 - L1MC/D LINE L1 -2214 5577 5510 517 253 119 36 chr5 54949203 54949668 -144680482 - L1MC/D LINE L1 -732 5429 4926 325 195 153 25 chr5 54949782 54949900 -144680250 - L1MC/D LINE L1 -5326 793 661 5598 100 25 0 chr5 54949977 54950765 -144679385 - L1PB1 LINE L1 -2 6149 5342 901 270 62 78 chr5 54950767 54951296 -144678854 - L1MC/D LINE L1 -5549 570 50 315 0 0 0 chr5 54951374 54951409 -144678741 + (TG)n Simple_repeat Simple_repeat 1 35 0 287 94 0 19 chr5 54951409 54951462 -144678688 + (GA)n Simple_repeat Simple_repeat 2 53 0 428 257 18 0 chr5 54953354 54953463 -144676687 - MIR SINE MIR -66 142 32 2630 133 36 2 chr5 54953478 54953892 -144676258 + MSTA LTR MaLR 1 428 0 291 387 0 0 chr5 54955379 54955498 -144674652 + L2 LINE L2 3139 3257 -15 3378 147 21 50 chr5 54955576 54955755 -144674395 - MER6A DNA MER2_type -260 605 422 1803 154 3 20 chr5 54955755 54956053 -144674097 + AluJo SINE Alu 1 293 -19 3378 147 21 50 chr5 54956053 54956064 -144674086 - MER6A DNA MER2_type -443 422 412 2555 62 3 0 chr5 54956064 54956371 -144673779 - AluY SINE Alu -3 308 1 3378 147 21 50 chr5 54956371 54956799 -144673351 - MER6A DNA MER2_type -453 412 4 405 235 39 20 chr5 54958008 54958110 -144672040 + L2 LINE L2 3168 3271 -1 479 276 132 52 chr5 54958185 54958548 -144671602 - MLT1L LTR MaLR -60 555 164 28 29 0 0 chr5 54959364 54959399 -144670751 + AT_rich Low_complexity Low_complexity 1 35 0 371 273 63 81 chr5 54959851 54960122 -144670028 - L2 LINE L2 -203 3069 2804 391 348 39 0 chr5 54960968 54961149 -144669001 - MIR3 SINE MIR -8 200 13 381 43 0 0 chr5 54961739 54961786 -144668364 + (TG)n Simple_repeat Simple_repeat 2 48 0 333 321 20 5 chr5 54961916 54962112 -144668038 + L1ME LINE L1 4860 5058 -1088 256 324 52 29 chr5 54962262 54962571 -144667579 + L1ME LINE L1 5272 5587 -577 2139 147 0 0 chr5 54963017 54963324 -144666826 + AluSx SINE Alu 1 307 -5 219 69 0 0 chr5 54963427 54963456 -144666694 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 646 285 91 7 chr5 54963599 54963873 -144666277 + MLT1J LTR MaLR 10 306 -205 1536 163 8 0 chr5 54963966 54964212 -144665938 + AluSx SINE Alu 1 248 -64 313 172 31 0 chr5 54964307 54964371 -144665779 - MER116 DNA Mariner -14 66 1 1069 242 69 32 chr5 54964557 54964962 -144665188 - LTR16C LTR ERVL -11 480 61 275 170 0 0 chr5 54965040 54965087 -144665063 + L2 LINE L2 3267 3313 0 207 0 0 0 chr5 54965139 54965162 -144664988 + (A)n Simple_repeat Simple_repeat 1 23 0 197 308 39 26 chr5 54965523 54965601 -144664549 + MIR SINE MIR 30 108 -100 587 259 43 52 chr5 54966958 54967332 -144662818 + L1MDb LINE L1 1137 1547 -5040 579 310 66 43 chr5 54967334 54967799 -144662351 + L2 LINE L2 2737 3288 -25 212 164 0 109 chr5 54968342 54968373 -144661777 - MIR SINE MIR -78 130 106 2044 143 110 15 chr5 54968373 54968764 -144661386 - MSTA LTR MaLR 0 428 1 212 164 0 109 chr5 54968764 54968787 -144661363 - MIR SINE MIR -102 106 82 238 350 120 8 chr5 54969624 54969741 -144660409 - L2 LINE L2 -3 3269 3140 212 235 20 0 chr5 54970004 54970055 -144660095 + L2 LINE L2 3261 3312 -1 180 0 0 0 chr5 54970290 54970310 -144659840 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3140 87 11 20 chr5 54971163 54971611 -144658539 + MLT2A1 LTR ERVL 1 444 0 411 21 0 0 chr5 54971744 54971792 -144658358 + (CA)n Simple_repeat Simple_repeat 2 49 0 1260 174 0 19 chr5 54972753 54972966 -144657184 - AluJo SINE Alu -16 296 88 1792 189 0 10 chr5 54972995 54973291 -144656859 + AluJo SINE Alu 6 298 -14 1030 206 111 63 chr5 54973904 54974346 -144655804 - LTR37B LTR ERV1 0 468 6 233 214 0 0 chr5 54975867 54975909 -144654241 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 722 183 85 107 chr5 55078029 55078158 -144551992 - L1ME LINE L1 -434 5732 5609 2783 159 20 12 chr5 55078158 55078649 -144551501 - L1MB2 LINE L1 -1 6170 5676 722 183 85 107 chr5 55078649 55078743 -144551407 - L1ME LINE L1 -557 5609 5514 1733 62 106 15 chr5 55078743 55079082 -144551068 + SVA Other Other 1 370 -1016 2306 72 3 3 chr5 55079487 55079777 -144550373 + AluY SINE Alu 12 301 -10 2417 78 0 0 chr5 55080232 55080528 -144549622 - AluSc SINE Alu -13 296 1 2065 116 0 27 chr5 55081226 55081527 -144548623 + AluSx SINE Alu 1 293 -19 1926 146 0 0 chr5 55081635 55081910 -144548240 - AluJb SINE Alu -24 288 14 2450 91 0 7 chr5 55083354 55083663 -144546487 - AluSg SINE Alu -3 307 1 2210 112 3 10 chr5 55084127 55084431 -144545719 - AluSq SINE Alu -5 308 7 488 104 0 15 chr5 55084561 55084628 -144545522 + U6 snRNA snRNA 41 106 -1 21 0 0 0 chr5 55084628 55084649 -144545501 + AT_rich Low_complexity Low_complexity 1 21 0 2061 116 3 0 chr5 55084712 55085033 -144545117 + AluSq SINE Alu 1 322 0 234 262 0 0 chr5 55086038 55086122 -144544028 + A-rich Low_complexity Low_complexity 1 84 0 653 264 36 6 chr5 55086513 55086680 -144543470 - MER45 DNA AcHobo -781 172 1 589 266 133 0 chr5 55087519 55087722 -144542428 - MIR SINE MIR -32 230 1 10319 179 50 36 chr5 55089027 55090373 -144539777 + L1MC1 LINE L1 445 1771 -4655 2585 72 0 0 chr5 55090373 55090679 -144539471 + AluSx SINE Alu 4 309 -3 10319 179 50 36 chr5 55090679 55091207 -144538943 + L1MC1 LINE L1 1771 2290 -4136 1956 69 0 46 chr5 55091207 55091468 -144538682 + AluY SINE Alu 54 302 -9 10319 179 50 36 chr5 55091468 55092015 -144538135 + L1MC1 LINE L1 2290 2828 -3598 2349 98 0 0 chr5 55092015 55092310 -144537840 + AluSg SINE Alu 1 295 -15 10319 179 50 36 chr5 55092310 55093152 -144536998 + L1MC1 LINE L1 2828 3775 -2651 2272 93 0 10 chr5 55093152 55093452 -144536698 + AluSx SINE Alu 1 297 -15 10319 179 50 36 chr5 55093452 55094061 -144536089 + L1MC1 LINE L1 3775 4374 -2052 1976 147 10 0 chr5 55094066 55094523 -144535627 - AluSx SINE Alu 0 462 3 3440 212 20 64 chr5 55094526 55095495 -144534655 + L1MC1 LINE L1 4380 5307 -1119 1678 165 4 11 chr5 55095495 55095768 -144534382 + AluJb SINE Alu 1 271 -41 3440 212 20 64 chr5 55095768 55095788 -144534362 + L1MC1 LINE L1 5307 5326 -1100 6101 172 24 25 chr5 55096412 55096974 -144533176 + L1MC1 LINE L1 5289 5850 -763 2403 107 0 0 chr5 55096974 55097282 -144532868 - AluSg SINE Alu -2 308 1 6101 172 24 25 chr5 55097282 55098035 -144532115 + L1MC1 LINE L1 5850 6604 -9 258 318 107 88 chr5 55098123 55098544 -144531606 - L2 LINE L2 -8 3264 2836 1188 156 39 15 chr5 55098647 55098852 -144531298 + AluJo SINE Alu 1 210 -102 215 269 0 0 chr5 55099409 55099461 -144530689 + L2 LINE L2 3262 3313 0 200 191 0 143 chr5 55099566 55099629 -144530521 - MER5B DNA MER1_type -1 177 124 2006 149 0 0 chr5 55099637 55099926 -144530224 + AluSx SINE Alu 1 289 -23 186 43 0 0 chr5 55099946 55099969 -144530181 + (TG)n Simple_repeat Simple_repeat 2 24 0 271 98 0 59 chr5 55099991 55100042 -144530108 - FLAM_A SINE Alu 0 133 86 822 236 42 19 chr5 55100042 55100258 -144529892 - AluJo SINE Alu -91 221 1 507 281 15 7 chr5 55100260 55100395 -144529755 + MER5B DNA MER1_type 43 178 0 845 204 74 6 chr5 55100438 55100600 -144529550 + MER21B LTR ERV1 327 499 -364 2216 106 0 20 chr5 55100904 55101206 -144528944 + AluSg SINE Alu 1 296 -14 201 277 15 15 chr5 55101257 55101322 -144528828 + MER5A DNA MER1_type 118 182 -7 225 65 0 0 chr5 55102908 55102939 -144527211 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 435 315 45 28 chr5 55102940 55103118 -144527032 - L2 LINE L2 -13 3300 3120 238 266 212 35 chr5 55103247 55103360 -144526790 + L2 LINE L2 3181 3313 0 * 312 281 31 76 chr5 55103356 55103580 -144526570 - L2 LINE L2 -439 2875 2662 216 311 14 0 chr5 55103980 55104054 -144526096 - MIR SINE MIR -36 226 152 1513 253 72 5 chr5 55104065 55104456 -144525694 + MLT1J2 LTR MaLR 16 432 -18 197 268 0 0 chr5 55104479 55104520 -144525630 - MIR SINE MIR -60 148 108 38 0 0 0 chr5 55104863 55104901 -144525249 + AT_rich Low_complexity Low_complexity 1 38 0 441 274 60 0 chr5 55105008 55105125 -144525025 + L2 LINE L2 3190 3313 0 2171 99 20 3 chr5 55105145 55105437 -144524713 - AluSx SINE Alu -15 297 1 470 123 123 12 chr5 55105623 55105704 -144524446 - 5S rRNA rRNA -31 90 1 512 313 50 6 chr5 55105969 55106148 -144524002 - MIR SINE MIR -45 217 31 228 327 127 0 chr5 55106876 55106986 -144523164 + L2 LINE L2 3149 3272 0 190 244 0 5 chr5 55108417 55108510 -144521640 + L2 LINE L2 3182 3312 -1 391 192 81 40 chr5 55108522 55108621 -144521529 - MARNA DNA Mariner -87 499 397 279 209 45 0 chr5 55108631 55108698 -144521452 + Charlie4 DNA MER1_type 21 90 -1871 1125 151 0 6 chr5 55108698 55108870 -144521280 - AluSg/x SINE Alu -11 299 129 245 253 13 27 chr5 55108879 55108954 -144521196 + Charlie4 DNA MER1_type 1888 1961 0 21 82 0 0 chr5 55108972 55109021 -144521129 + AT_rich Low_complexity Low_complexity 1 49 0 261 247 185 0 chr5 55109046 55109127 -144521023 - MARNA DNA Mariner -226 360 265 205 183 33 17 chr5 55109203 55109237 -144520913 + (TA)n Simple_repeat Simple_repeat 2 39 -23 2154 125 0 0 chr5 55109237 55109532 -144520618 + AluSx SINE Alu 1 295 -17 205 183 33 17 chr5 55109532 55109557 -144520593 + (TA)n Simple_repeat Simple_repeat 39 62 0 295 289 0 0 chr5 55109557 55109647 -144520503 + L1MC4 LINE L1 6614 6703 -1339 284 216 0 69 chr5 55109566 55109668 -144520482 - L1MC4 LINE L1 -1340 6702 6608 * 198 271 106 0 chr5 55109692 55109777 -144520373 - L2 LINE L2 -38 3275 3182 237 250 24 12 chr5 55110439 55110523 -144519627 + L1ME3 LINE L1 4757 4841 -1305 483 279 43 5 chr5 55110577 55110919 -144519231 + L1ME3 LINE L1 5071 5426 -736 258 32 0 0 chr5 55110968 55110999 -144519151 + (CAA)n Simple_repeat Simple_repeat 2 32 0 568 281 76 45 chr5 55111001 55111263 -144518887 + L1ME3 LINE L1 5557 5809 -353 2274 92 13 0 chr5 55111263 55111568 -144518582 + AluSg SINE Alu 1 309 -1 568 281 76 45 chr5 55111568 55111635 -144518515 + L1ME3 LINE L1 5809 5804 -358 2335 74 40 7 chr5 55111635 55111931 -144518219 + AluY SINE Alu 1 306 -5 568 281 76 45 chr5 55111931 55111960 -144518190 + L1ME3 LINE L1 5803 5830 -332 2336 135 44 95 chr5 55112254 55112290 -144517860 - LTR54 LTR ERV1 -5 505 469 2043 138 0 13 chr5 55112290 55112594 -144517556 - AluSx SINE Alu -12 300 1 2336 135 44 95 chr5 55112594 55112655 -144517495 - LTR54 LTR ERV1 -41 469 406 1451 131 93 62 chr5 55112655 55112945 -144517205 + AluJo SINE Alu 1 299 -13 2336 135 44 95 chr5 55112945 55113351 -144516799 - LTR54 LTR ERV1 -104 406 27 1037 181 5 26 chr5 55113381 55113574 -144516576 + AluSg/x SINE Alu 110 298 -14 352 155 36 0 chr5 55113581 55113665 -144516485 + (CATATA)n Simple_repeat Simple_repeat 1 87 0 488 143 14 0 chr5 55114634 55114704 -144515446 + AluSx SINE Alu 3 73 -240 6239 131 13 15 chr5 55114705 55115676 -144514474 + LTR5 LTR ERVK 1 969 0 1610 129 0 13 chr5 55115677 55115902 -144514248 + AluSx SINE Alu 69 290 -20 1865 152 0 30 chr5 55116394 55116690 -144513460 - AluJo SINE Alu -13 299 13 803 137 8 23 chr5 55116721 55116852 -144513298 - FLAM_A SINE Alu -1 132 4 2269 102 3 0 chr5 55116888 55117183 -144512967 + AluSp SINE Alu 1 296 -17 2266 78 0 3 chr5 55117954 55118247 -144511903 - AluY SINE Alu -19 292 1 1001 248 8 10 chr5 55118540 55118783 -144511367 + MIR SINE MIR 1 231 -31 342 282 22 83 chr5 55118820 55118994 -144511156 - MER5A DNA MER1_type -12 166 1 953 216 183 30 chr5 55119982 55120310 -144509840 + LTR33 LTR ERVL 1 378 -143 1828 153 24 20 chr5 55120382 55120677 -144509473 - AluJb SINE Alu -16 296 1 215 315 22 34 chr5 55120940 55121029 -144509121 - MIR SINE MIR -105 103 16 586 227 108 35 chr5 55121301 55121504 -144508646 + MIR SINE MIR 19 236 -26 2112 127 0 19 chr5 55121514 55121828 -144508322 + AluSx SINE Alu 1 308 -4 237 129 32 16 chr5 55123169 55123231 -144506919 + (CAT)n Simple_repeat Simple_repeat 1 63 0 297 271 65 105 chr5 55123234 55123357 -144506793 - MIR SINE MIR -12 250 140 2286 99 3 0 chr5 55123357 55123649 -144506501 + AluSp SINE Alu 2 294 -19 297 271 65 105 chr5 55123649 55123772 -144506378 - MIR SINE MIR -122 140 14 1160 106 6 0 chr5 55123795 55123974 -144506176 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1651 181 0 18 chr5 55123990 55124271 -144505879 - AluJo SINE Alu -36 276 1 2294 146 33 0 chr5 55124835 55125171 -144504979 - MER7A DNA MER2_type 0 346 2 247 152 22 0 chr5 55125270 55125316 -144504834 + MLT1J1 LTR MaLR 396 442 -4 326 315 9 18 chr5 55125813 55125924 -144504226 + MLT1I LTR MaLR 83 192 -217 1928 166 22 9 chr5 55125928 55126412 -144503738 + MER44D DNA MER2_type 3 605 0 794 233 93 38 chr5 55126412 55126570 -144503580 + MLT1J2 LTR MaLR 198 375 -75 2147 125 0 0 chr5 55126570 55126865 -144503285 - AluSx SINE Alu -17 295 1 794 233 93 38 chr5 55126865 55126940 -144503210 + MLT1J2 LTR MaLR 375 444 -6 696 277 126 9 chr5 55127766 55128119 -144502031 + L2 LINE L2 2005 3311 -2 2448 64 0 3 chr5 55129547 55129845 -144500305 + AluY SINE Alu 3 299 -12 210 217 87 58 chr5 55130445 55130514 -144499636 - MIR SINE MIR -110 152 82 2566 147 26 41 chr5 55130516 55130906 -144499244 + MER65C LTR ERV1 1 395 -66 2323 93 0 0 chr5 55130906 55131206 -144498944 - AluSx SINE Alu -12 300 1 2566 147 26 41 chr5 55131206 55131250 -144498900 + MER65C LTR ERV1 395 438 -23 378 0 0 0 chr5 55131250 55131292 -144498858 + (TC)n Simple_repeat Simple_repeat 2 43 0 225 0 0 0 chr5 55131291 55131316 -144498834 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 2566 147 26 41 chr5 55131292 55131316 -144498834 + MER65C LTR ERV1 438 432 -29 1718 92 4 21 chr5 55131316 55131554 -144498596 - AluSp SINE Alu -79 234 1 2566 147 26 41 chr5 55131554 55131585 -144498565 + MER65C LTR ERV1 431 461 0 2161 84 0 0 chr5 55132299 55132562 -144497588 + AluSc SINE Alu 40 302 -7 260 271 0 0 chr5 55132614 55132673 -144497477 - MER5A DNA MER1_type -67 122 64 373 82 0 0 chr5 55132673 55132722 -144497428 - HY4 scRNA scRNA -44 49 1 225 299 0 15 chr5 55132726 55132793 -144497357 - MER5A DNA MER1_type -117 72 7 200 57 0 57 chr5 55135049 55135084 -144495066 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 2192 90 17 10 chr5 55135203 55135493 -144494657 + AluSx SINE Alu 1 292 -20 271 368 53 0 chr5 55135740 55135835 -144494315 + L2 LINE L2 3134 3233 -39 961 189 6 6 chr5 55135898 55136062 -144494088 - FRAM SINE Alu -2 164 1 361 290 104 6 chr5 55136193 55136538 -144493612 + L1ME2 LINE L1 4231 4609 -1537 576 295 122 35 chr5 55136556 55137017 -144493133 + L1ME2 LINE L1 5438 5938 -226 317 336 35 9 chr5 55137384 55137497 -144492653 + MIR3 SINE MIR 15 130 -78 271 310 0 0 chr5 55137550 55137621 -144492529 - MIR SINE MIR 0 262 192 3152 229 49 82 chr5 55137628 55137644 -144492506 - L1M4 LINE L1 -1380 4766 4751 1780 175 136 16 chr5 55137644 55138026 -144492124 - MSTC LTR MaLR 0 428 1 3152 229 49 82 chr5 55138026 55138626 -144491524 - L1M4 LINE L1 -1395 4751 4133 1675 123 23 11 chr5 55138626 55138886 -144491264 + AluSq SINE Alu 1 263 -50 3152 229 49 82 chr5 55138886 55139298 -144490852 - L1M4 LINE L1 -2013 4133 3783 2106 118 3 16 chr5 55139298 55139603 -144490547 - AluSx SINE Alu -11 301 1 3152 229 49 82 chr5 55139603 55139836 -144490314 - L1M4 LINE L1 -2363 3783 3544 445 175 0 0 chr5 55139837 55139900 -144490250 + AluJ/FLAM SINE Alu 2 64 -248 2402 205 52 14 chr5 55140010 55140938 -144489212 - L1MDa LINE L1 -5104 1436 3 759 286 94 24 chr5 55141787 55142200 -144487950 + LTR33 LTR ERVL 42 483 -38 2047 142 14 0 chr5 55142324 55142619 -144487531 + AluJo SINE Alu 1 299 -13 2247 107 0 7 chr5 55142647 55142957 -144487193 + AluSx SINE Alu 1 308 -4 2440 90 0 3 chr5 55143096 55143407 -144486743 + AluSp SINE Alu 4 313 0 481 173 70 177 chr5 55143770 55143871 -144486279 + MIR SINE MIR 19 82 -180 1730 142 52 4 chr5 55143871 55144163 -144485987 - AluJb SINE Alu 0 305 1 481 173 70 177 chr5 55144163 55144303 -144485847 + MIR SINE MIR 82 235 -27 424 274 100 121 chr5 55144477 55144867 -144485283 + L3 LINE CR1 445 826 -751 6419 54 32 3 chr5 55144874 55145632 -144484518 + LTR17 LTR ERV1 1 780 0 342 288 102 58 chr5 55145684 55145910 -144484240 + MLT1K LTR MaLR 11 246 -342 2284 141 35 0 chr5 55146098 55146473 -144483677 - L1 LINE L1 -1053 5093 4706 569 315 118 16 chr5 55146525 55146890 -144483260 + L3 LINE CR1 868 1269 -308 1058 56 0 0 chr5 55146911 55147037 -144483113 + AluY SINE Alu 174 299 -12 5194 163 29 11 chr5 55147037 55148291 -144481859 - L1MB3 LINE L1 -10 6173 4879 1515 213 71 31 chr5 55148291 55148672 -144481478 - MSTD LTR MaLR 0 396 1 5194 163 29 11 chr5 55148672 55149190 -144480960 - L1MB3 LINE L1 -1304 4879 4372 515 271 147 23 chr5 55149190 55149408 -144480742 + L3 LINE CR1 1260 1504 -73 186 43 0 0 chr5 55149825 55149848 -144480302 + (TC)n Simple_repeat Simple_repeat 1 23 0 2350 99 0 0 chr5 55151744 55152046 -144478104 + AluSg SINE Alu 1 302 -8 2332 92 0 0 chr5 55153158 55153452 -144476698 - AluSx SINE Alu -18 294 1 1015 209 34 34 chr5 55153777 55154012 -144476138 + MIR SINE MIR 28 262 0 558 309 98 5 chr5 55154104 55154308 -144475842 - MIR SINE MIR 0 262 40 333 286 98 30 chr5 55154433 55154566 -144475584 - MER5A DNA MER1_type -1 188 47 918 161 36 52 chr5 55154567 55154759 -144475391 + MER5A DNA MER1_type 1 189 0 26 30 0 0 chr5 55154874 55154907 -144475243 + AT_rich Low_complexity Low_complexity 1 33 0 2183 81 53 0 chr5 55156008 55156293 -144473857 - AluSp SINE Alu -13 300 1 2375 48 0 17 chr5 55156505 55156822 -144473328 + AluY SINE Alu 1 311 0 2477 49 0 3 chr5 55157327 55157613 -144472537 + AluY SINE Alu 11 295 -16 450 127 113 0 chr5 55157613 55157684 -144472466 + FLAM SINE Alu 43 121 -22 24 0 0 0 chr5 55158047 55158071 -144472079 + AT_rich Low_complexity Low_complexity 1 24 0 989 201 68 32 chr5 55159187 55159409 -144470741 + MIR SINE MIR 5 238 -24 4685 93 11 6 chr5 55159409 55160035 -144470115 + L1PA11 LINE L1 5546 6174 0 989 201 68 32 chr5 55160035 55160061 -144470089 + MIR SINE MIR 238 262 0 25 31 0 0 chr5 55160672 55160704 -144469446 + AT_rich Low_complexity Low_complexity 1 32 0 2285 110 15 78 chr5 55160870 55161058 -144469092 + THE1C LTR MaLR 1 152 -223 7570 31 14 0 chr5 55161058 55162227 -144467923 - L1PA4 LINE L1 -3 6152 4961 2285 110 15 78 chr5 55162227 55162438 -144467712 + THE1C LTR MaLR 152 375 0 681 274 127 65 chr5 55162656 55162759 -144467391 + L3 LINE CR1 1192 1287 -290 2231 133 0 0 chr5 55162759 55163067 -144467083 - AluSx SINE Alu -2 310 3 681 274 127 65 chr5 55163067 55163317 -144466833 + L3 LINE CR1 1287 1567 -10 1971 154 0 19 chr5 55163667 55163985 -144466165 - AluJb SINE Alu 0 312 1 620 234 110 92 chr5 55165088 55165131 -144465019 - L1ME4a LINE L1 -179 5942 5901 6846 142 50 33 chr5 55165131 55166122 -144464028 - Tigger3b DNA MER2_type -1798 1230 258 261 0 0 0 chr5 55166122 55166151 -144463999 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2037 108 7 0 chr5 55166153 55166431 -144463719 - AluSx SINE Alu -32 280 1 6846 142 50 33 chr5 55166431 55166645 -144463505 - Tigger3b DNA MER2_type -2770 258 1 1910 147 3 13 chr5 55166651 55166958 -144463192 - AluSx SINE Alu 0 312 9 620 234 110 92 chr5 55166958 55167176 -144462974 - L1ME4a LINE L1 -224 5897 5660 2472 54 3 0 chr5 55167176 55167472 -144462678 - AluY SINE Alu -14 297 1 620 234 110 92 chr5 55167472 55167637 -144462513 - L1ME4a LINE L1 -461 5660 5500 1075 127 0 24 chr5 55167712 55167878 -144462272 - AluSg/x SINE Alu -12 298 137 2368 57 44 0 chr5 55168001 55168298 -144461852 + AluY SINE Alu 1 310 -1 705 311 21 13 chr5 55169058 55169293 -144460857 - MIR SINE MIR -25 237 1 23 33 0 0 chr5 55169703 55169733 -144460417 + AT_rich Low_complexity Low_complexity 1 30 0 360 0 0 0 chr5 55169758 55169798 -144460352 + (CA)n Simple_repeat Simple_repeat 2 41 0 377 360 55 36 chr5 55169804 55170057 -144460093 + L1M4 LINE L1 3696 3953 -2193 773 256 55 35 chr5 55170227 55170481 -144459669 - MIR SINE MIR -2 260 2 2560 122 34 0 chr5 55171592 55171944 -144458206 - THE1B LTR MaLR 0 364 1 368 310 10 0 chr5 55172053 55172153 -144457997 - MIR SINE MIR 0 262 162 236 375 0 0 chr5 55172361 55172441 -144457709 + MIR3 SINE MIR 108 187 -21 453 296 164 0 chr5 55173357 55173546 -144456604 + MIR SINE MIR 28 247 -15 14297 109 27 44 chr5 55173873 55175332 -144454818 + Tigger1 DNA MER2_type 188 1597 -821 2375 72 0 7 chr5 55175332 55175622 -144454528 + AluY SINE Alu 12 299 -12 14297 109 27 44 chr5 55175622 55176431 -144453719 + Tigger1 DNA MER2_type 1597 2418 0 219 203 0 0 chr5 55176495 55176559 -144453591 + GA-rich Low_complexity Low_complexity 1 64 0 507 195 4 70 chr5 55176559 55176699 -144453451 + L1MC4 LINE L1 7880 8025 -7 2314 107 0 0 chr5 55176699 55177007 -144453143 + AluSx SINE Alu 1 308 -4 2012 124 7 0 chr5 55178241 55178547 -144451603 + AluSx SINE Alu 1 308 0 42357 64 4 2 chr5 55179068 55185209 -144444941 + L1PA5 LINE L1 1 6154 0 519 314 114 14 chr5 55185383 55185603 -144444547 + MIR SINE MIR 20 261 -1 1107 218 108 73 chr5 55185773 55186136 -144444014 + MLT1D LTR MaLR 1 451 -116 2199 121 3 0 chr5 55186136 55186433 -144443717 - AluSx SINE Alu -14 298 1 1107 218 108 73 chr5 55186433 55186546 -144443604 + MLT1D LTR MaLR 451 559 -8 388 299 19 32 chr5 55187175 55187332 -144442818 - MIR SINE MIR -80 182 28 275 259 15 118 chr5 55187542 55187677 -144442473 + MIR3 SINE MIR 42 162 -46 357 282 104 49 chr5 55187678 55187805 -144442345 + MER5B DNA MER1_type 4 143 -35 2244 95 7 0 chr5 55187805 55188100 -144442050 - AluSc SINE Alu -12 297 1 357 282 104 49 chr5 55188100 55188135 -144442015 + MER5B DNA MER1_type 143 175 -3 681 265 51 39 chr5 55188641 55188875 -144441275 - MIR SINE MIR -21 241 5 474 49 0 0 chr5 55189362 55189423 -144440727 + (CA)n Simple_repeat Simple_repeat 1 61 0 23 86 0 0 chr5 55189732 55189790 -144440360 + AT_rich Low_complexity Low_complexity 1 58 0 240 122 0 0 chr5 55190437 55190478 -144439672 + (CA)n Simple_repeat Simple_repeat 1 41 0 236 326 102 21 chr5 55191357 55191544 -144438606 + L1MC/D LINE L1 5686 5887 -1921 797 248 48 56 chr5 55191881 55192151 -144437999 + LTR16C LTR ERVL 224 491 0 390 234 14 99 chr5 55192152 55192293 -144437857 + L2 LINE L2 3184 3312 -1 13916 173 50 23 chr5 55192452 55193906 -144436244 + ERVL-B1 LTR ERVL 54 1606 -4158 760 234 64 107 chr5 55193906 55194102 -144436048 + MER4C LTR ERV1 1 204 -261 2568 78 0 0 chr5 55194102 55194410 -144435740 - AluSx SINE Alu -4 308 1 760 234 64 107 chr5 55194410 55194697 -144435453 + MER4C LTR ERV1 204 463 -2 13916 173 50 23 chr5 55194697 55195761 -144434389 + ERVL-B1 LTR ERVL 1606 2640 -3124 8038 155 10 71 chr5 55195762 55197518 -144432632 + L1P4 LINE L1 3704 5320 -845 1711 198 0 10 chr5 55197518 55197816 -144432334 - AluJb SINE Alu -15 297 3 8038 155 10 71 chr5 55197816 55198097 -144432053 + L1P4 LINE L1 5320 5616 -549 2306 154 0 8 chr5 55198097 55198468 -144431682 - HSMAR2 DNA Mariner -749 553 186 1679 115 27 51 chr5 55198465 55198761 -144431389 - HSMAR2 DNA Mariner -1012 290 2 * 2469 129 13 24 chr5 55198786 55199165 -144430985 + THE1C LTR MaLR 1 375 0 10255 112 48 42 chr5 55199166 55199709 -144430441 + THE1C-int LTR MaLR 2 540 -1040 2084 154 0 0 chr5 55199709 55200020 -144430130 + AluSx SINE Alu 1 311 -1 10255 112 48 42 chr5 55200020 55201046 -144429104 + THE1C-int LTR MaLR 540 1580 0 2347 108 54 38 chr5 55201046 55201195 -144428955 + THE1C LTR MaLR 1 146 -229 1913 143 0 20 chr5 55201195 55201495 -144428655 - AluSg SINE Alu -16 294 1 2347 108 54 38 chr5 55201495 55201714 -144428436 + THE1C LTR MaLR 146 375 0 234 0 0 0 chr5 55201753 55201779 -144428371 + (TG)n Simple_repeat Simple_repeat 2 27 0 1627 145 37 7 chr5 55201802 55202098 -144428052 + ERVL-B1 LTR ERVL 5451 5755 -9 1892 215 99 19 chr5 55202100 55202524 -144427626 + MLT2B1 LTR ERVL 1 458 -62 186 43 0 0 chr5 55202529 55202552 -144427598 + (TC)n Simple_repeat Simple_repeat 2 24 0 670 209 0 8 chr5 55203736 55203865 -144426285 - AluJb SINE Alu -10 302 175 2348 92 3 3 chr5 55203870 55204173 -144425977 - AluSp SINE Alu -10 303 1 333 68 0 0 chr5 55204366 55204410 -144425740 + (TA)n Simple_repeat Simple_repeat 2 45 0 386 336 0 16 chr5 55204683 55204811 -144425339 - L2 LINE L2 0 3313 3188 328 302 180 0 chr5 55205921 55206060 -144424090 - MER5A DNA MER1_type 0 189 26 273 354 31 8 chr5 55206356 55206486 -144423664 + MIR SINE MIR 66 198 -64 4740 98 44 35 chr5 55206503 55207185 -144422965 - LTR12 LTR ERV1 0 688 1 517 283 147 5 chr5 55207948 55208139 -144422011 + MIR SINE MIR 19 236 -26 2199 98 7 17 chr5 55208199 55208496 -144421654 - AluSx SINE Alu -18 294 1 240 234 0 0 chr5 55211373 55211420 -144418730 + L2 LINE L2 3266 3312 -1 477 218 188 50 chr5 55211521 55211760 -144418390 - LTR41 LTR ERVL -1 772 501 469 204 241 15 chr5 55212095 55212232 -144417918 - LTR41 LTR ERVL -604 169 2 27 29 0 0 chr5 55212263 55212297 -144417853 + AT_rich Low_complexity Low_complexity 1 34 0 371 244 51 103 chr5 55212570 55212804 -144417346 + L1M4c LINE L1 2278 2499 -3885 412 234 263 7 chr5 55212852 55212989 -144417161 - MIR SINE MIR -84 178 7 242 94 0 0 chr5 55212989 55213021 -144417129 + MLT1H LTR MaLR 12 43 -506 2739 242 56 40 chr5 55213392 55214431 -144415719 - L1P4 LINE L1 -717 5448 4383 371 257 29 11 chr5 55214442 55214599 -144415551 - L1ME LINE L1 -4887 675 533 273 146 0 0 chr5 55214759 55214807 -144415343 + (TTCC)n Simple_repeat Simple_repeat 4 51 0 210 205 54 27 chr5 55214824 55214936 -144415214 + (CTATA)n Simple_repeat Simple_repeat 4 118 0 270 157 29 14 chr5 55214992 55215062 -144415088 + CT-rich Low_complexity Low_complexity 4 74 0 284 227 27 55 chr5 55215363 55215428 -144414722 - L1ME LINE L1 -5938 132 73 5633 83 57 13 chr5 55215428 55216632 -144413518 - SVA Other Other -988 1385 15 284 227 27 55 chr5 55216632 55216703 -144413447 - L1ME LINE L1 -5997 73 2 278 26 26 0 chr5 55217709 55217748 -144412402 + (TG)n Simple_repeat Simple_repeat 2 41 0 2143 103 10 17 chr5 55217748 55218039 -144412111 - AluSx SINE Alu -21 291 1 586 125 23 0 chr5 55218115 55218203 -144411947 - 5S rRNA rRNA -31 90 1 1653 188 78 76 chr5 55219873 55220389 -144409761 - Charlie1b DNA MER1_type 0 523 7 207 0 0 0 chr5 55220847 55220870 -144409280 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 602 211 62 25 chr5 55220874 55221035 -144409115 - MLT1L LTR MaLR -31 584 418 248 324 0 28 chr5 55221166 55221274 -144408876 - MLT1L LTR MaLR -359 256 152 265 224 45 0 chr5 55221389 55221456 -144408694 + MIR SINE MIR 102 171 -91 333 333 17 8 chr5 55222034 55222154 -144407996 - MIR SINE MIR -118 144 24 266 368 65 11 chr5 55222781 55222966 -144407184 + MIR SINE MIR 34 228 -34 210 37 0 0 chr5 55223221 55223248 -144406902 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 1924 132 35 0 chr5 55223248 55223536 -144406614 - AluSx SINE Alu -14 298 1 5517 106 14 0 chr5 55223686 55224417 -144405733 - L1PA16 LINE L1 -9 6157 5391 2012 124 7 39 chr5 55224417 55224723 -144405427 - AluSx SINE Alu -16 296 1 5517 106 14 0 chr5 55224723 55225014 -144405136 - L1PA16 LINE L1 -775 5391 5106 565 274 0 0 chr5 55225421 55225574 -144404576 + MIR SINE MIR 94 246 -16 1724 154 7 49 chr5 55225963 55226269 -144403881 - AluJb SINE Alu -16 296 4 5232 51 12 12 chr5 55226322 55226985 -144403165 - L1PA7 LINE L1 -2 6152 5490 186 43 0 0 chr5 55227255 55227278 -144402872 + (T)n Simple_repeat Simple_repeat 1 23 0 841 241 10 39 chr5 55228928 55229135 -144401015 - MER63A DNA MER1_type -9 201 1 1867 130 79 0 chr5 55229177 55229454 -144400696 + AluJo SINE Alu 1 299 -13 2483 254 54 49 chr5 55230177 55231069 -144399081 + L1MC4 LINE L1 6458 7353 -689 727 213 18 6 chr5 55231043 55231212 -144398938 + L1MB7 LINE L1 5998 6168 -16 * 498 227 386 0 chr5 55231293 55231632 -144398518 - LTR50 LTR ERVL -324 471 2 216 0 0 0 chr5 55232808 55232832 -144397318 + (T)n Simple_repeat Simple_repeat 1 24 0 181 267 0 0 chr5 55234579 55234639 -144395511 - L2 LINE L2 -151 3162 3103 2119 153 14 67 chr5 55234672 55235043 -144395107 + MLT2C1 LTR ERVL 1 349 -48 186 43 0 0 chr5 55235043 55235066 -144395084 + (CA)n Simple_repeat Simple_repeat 2 24 0 2119 153 14 67 chr5 55235066 55235113 -144395037 + MLT2C1 LTR ERVL 349 397 0 368 278 48 43 chr5 55235159 55235368 -144394782 + L2 LINE L2 3008 3217 -96 1061 283 85 22 chr5 55235368 55235778 -144394372 - LTR16A LTR ERVL 0 450 15 279 133 0 0 chr5 55235846 55235891 -144394259 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 234 323 0 0 chr5 55236560 55236625 -144393525 + L2 LINE L2 3248 3312 -1 381 258 23 38 chr5 55236629 55236761 -144393389 + MIR3 SINE MIR 38 167 -41 1927 142 38 0 chr5 55236789 55237077 -144393073 - AluJb SINE Alu -8 304 6 444 294 127 0 chr5 55238990 55239187 -144390963 - MIR SINE MIR -12 250 29 2758 90 0 0 chr5 55239316 55239671 -144390479 - THE1A LTR MaLR 0 355 1 324 48 0 0 chr5 55239826 55239868 -144390282 + (GA)n Simple_repeat Simple_repeat 1 42 0 928 197 42 24 chr5 55240066 55240279 -144389871 - MER82 DNA MER2_type -436 217 1 431 234 86 39 chr5 55240299 55240427 -144389723 + L2 LINE L2 3139 3272 0 293 224 60 0 chr5 55241940 55242007 -144388143 + MIR SINE MIR 57 127 -81 2519 55 10 3 chr5 55242215 55242522 -144387628 - AluY SINE Alu -2 309 1 668 281 49 20 chr5 55243020 55243266 -144386884 + MIR SINE MIR 9 261 -1 237 223 214 10 chr5 55243276 55243379 -144386771 - MIR SINE MIR -58 150 27 2129 112 28 0 chr5 55243391 55243677 -144386473 - AluSx SINE Alu -18 294 1 1616 150 88 15 chr5 55244648 55244922 -144385228 - AluJo SINE Alu -16 296 3 4480 140 12 36 chr5 55245009 55245188 -144384962 + MER50 LTR ERV1 1 183 -551 2322 93 0 7 chr5 55245188 55245509 -144384641 + AluSq SINE Alu 1 313 0 4480 140 12 36 chr5 55245509 55246081 -144384069 + MER50 LTR ERV1 183 734 0 329 314 76 34 chr5 55246826 55247090 -144383060 + L2 LINE L2 2535 2809 -505 868 192 33 0 chr5 55247341 55247523 -144382627 - MER53 DNA DNA -1 188 1 1626 179 21 10 chr5 55247785 55248076 -144382074 - AluJo SINE Alu -18 294 1 841 224 65 60 chr5 55249443 55249907 -144380243 - L1MC5 LINE L1 -35 7926 7461 769 219 56 114 chr5 55250046 55250475 -144379675 - L1MC4 LINE L1 -141 7901 7498 7317 41 8 2 chr5 55250503 55251381 -144378769 - L1PA5 LINE L1 -13 6141 5259 6616 116 72 63 chr5 55252932 55254178 -144375972 + pTR5 LTR ERV1 743 1999 -439 282 250 48 32 chr5 55254178 55254302 -144375848 + LTR30 LTR ERV1 517 642 -80 1591 94 5 0 chr5 55254305 55254528 -144375622 + pTR5 LTR ERV1 181 394 -2044 1949 157 13 0 chr5 55254641 55254941 -144375209 - AluSx SINE Alu -6 306 3 3314 14 0 0 chr5 55254971 55255341 -144374809 - L1PA3 LINE L1 0 6155 5786 244 364 78 0 chr5 55255597 55255726 -144374424 - MIR SINE MIR -73 189 51 567 272 55 10 chr5 55256714 55256916 -144373234 + MIR SINE MIR 31 241 -21 260 347 27 7 chr5 55257834 55257981 -144372169 - MARNA DNA Mariner -382 204 55 331 271 93 33 chr5 55258012 55258036 -144372114 + MIR SINE MIR 53 74 -188 941 182 23 68 chr5 55258036 55258204 -144371946 - MER6B DNA MER2_type -655 210 53 2229 98 47 0 chr5 55258204 55258501 -144371649 - AluSx SINE Alu -1 311 1 941 182 23 68 chr5 55258501 55258552 -144371598 - MER6B DNA MER2_type -812 53 1 331 271 93 33 chr5 55258552 55258678 -144371472 + MIR SINE MIR 74 212 -50 1092 281 117 41 chr5 55258962 55259524 -144370626 + MLT1L LTR MaLR 1 605 -10 484 232 192 7 chr5 55259839 55259990 -144370160 + MER5A DNA MER1_type 9 187 -2 2102 117 52 18 chr5 55261186 55261512 -144368638 - MER1B DNA MER1_type 0 337 1 2140 164 34 3 chr5 55262565 55262943 -144367207 - MLT1B LTR MaLR 0 390 1 289 344 0 16 chr5 55263037 55263159 -144366991 - MIR3 SINE MIR -11 197 78 596 278 7 89 chr5 55264047 55264164 -144365986 + MLT1J LTR MaLR 1 126 -385 1179 228 5 0 chr5 55264164 55264383 -144365767 + MER58A DNA MER1_type 5 224 0 596 278 7 89 chr5 55264383 55264546 -144365604 + MLT1J LTR MaLR 126 258 -253 1194 220 0 0 chr5 55264549 55264763 -144365387 - MER58A DNA MER1_type -10 214 1 307 274 54 54 chr5 55264771 55264939 -144365211 + MLT1J LTR MaLR 328 495 -16 1980 128 38 3 chr5 55264987 55265277 -144364873 - AluSx SINE Alu -12 300 1 250 290 56 37 chr5 55265330 55265437 -144364713 - L2 LINE L2 -16 3256 3148 2908 170 43 47 chr5 55265525 55266124 -144364026 - MER77 LTR ERV1 0 605 9 2455 59 7 3 chr5 55266274 55266577 -144363573 + AluY SINE Alu 1 304 -7 2139 138 7 0 chr5 55266682 55266987 -144363163 + AluSx SINE Alu 1 307 -5 246 62 0 0 chr5 55266987 55267019 -144363131 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 284 338 115 67 chr5 55267172 55268066 -144362084 - L2 LINE L2 -344 2970 2034 211 376 77 22 chr5 55271034 55271215 -144358935 - MIR3 SINE MIR -57 151 2 24 32 0 0 chr5 55274127 55274158 -144355992 + AT_rich Low_complexity Low_complexity 1 31 0 1897 115 34 0 chr5 55274651 55274920 -144355230 + L1PA16 LINE L1 5880 6157 -9 869 173 0 0 chr5 55275651 55275784 -144354366 - FLAM_C SINE Alu 0 133 1 859 101 25 0 chr5 55276193 55276312 -144353838 + AluSq/x SINE Alu 1 122 -190 194 0 39 0 chr5 55276312 55276338 -144353812 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1930 117 8 0 chr5 55276528 55276815 -144353335 - AluSx SINE Alu 0 306 18 963 194 58 58 chr5 55278460 55278702 -144351448 - MIR SINE MIR -8 254 13 1559 149 3 35 chr5 55279201 55279483 -144350667 - MER1B DNA MER1_type -66 273 1 1917 123 48 10 chr5 55280277 55280569 -144349581 - AluSx SINE Alu -9 303 1 338 253 135 65 chr5 55280902 55281072 -144349078 - MIR SINE MIR -43 219 38 270 248 41 6 chr5 55281472 55281604 -144348546 + MIR SINE MIR 14 221 -41 2368 103 7 0 chr5 55281716 55282026 -144348124 + AluSx SINE Alu 1 312 0 226 196 86 141 chr5 55282306 55282469 -144347681 + L1ME4a LINE L1 5963 6116 -5 944 188 0 0 chr5 55282539 55282704 -144347446 - FRAM SINE Alu -4 172 8 823 302 14 9 chr5 55283485 55283707 -144346443 - MIR SINE MIR -38 224 2 1298 242 91 48 chr5 55283830 55284314 -144345836 + MLT1D LTR MaLR 1 505 0 409 268 14 65 chr5 55284410 55284548 -144345602 + MIR SINE MIR 60 190 -72 344 279 79 60 chr5 55285570 55285835 -144344315 + L2 LINE L2 2612 2881 -433 220 189 27 27 chr5 55286216 55286290 -144343860 + T-rich Low_complexity Low_complexity 3 76 0 291 215 0 0 chr5 55286321 55286386 -144343764 + (TATATG)n Simple_repeat Simple_repeat 1 65 0 236 206 33 87 chr5 55286393 55286485 -144343665 + L2 LINE L2 3170 3256 -57 * 444 174 9 73 chr5 55286476 55286585 -144343565 - MER5B DNA MER1_type -69 109 8 439 289 79 13 chr5 55286581 55286733 -144343417 - MIR3 SINE MIR -33 175 14 * 343 234 106 0 chr5 55286813 55286885 -144343265 - MER81 DNA DNA -1 113 27 1638 164 98 161 chr5 55286885 55287519 -144342631 + LTR49 LTR ERV1 1 594 -1 343 234 106 0 chr5 55287519 55287540 -144342610 - MER81 DNA DNA -87 27 10 632 287 104 13 chr5 55287592 55287822 -144342328 + MIR SINE MIR 10 260 -2 190 203 17 17 chr5 55287868 55287927 -144342223 + CT-rich Low_complexity Low_complexity 2 60 0 640 229 26 36 chr5 55288870 55289062 -144341088 + L1ME2 LINE L1 5799 5988 -176 267 352 23 42 chr5 55289074 55289338 -144340812 + L2 LINE L2 2422 2680 -634 39 60 0 0 chr5 55289354 55289421 -144340729 + AT_rich Low_complexity Low_complexity 1 67 0 308 291 134 35 chr5 55289630 55289891 -144340259 - L1ME3A LINE L1 -202 5968 5682 1158 243 171 23 chr5 55289893 55290333 -144339817 + MLT1D LTR MaLR 1 505 0 3415 96 0 0 chr5 55290435 55290873 -144339277 + L1PB1 LINE L1 5714 6151 0 23 0 0 0 chr5 55290873 55290896 -144339254 + AT_rich Low_complexity Low_complexity 1 23 0 213 39 0 0 chr5 55290950 55290976 -144339174 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1830 160 3 3 chr5 55290978 55291260 -144338890 - AluJb SINE Alu -30 282 1 534 298 21 12 chr5 55291265 55291507 -144338643 - L1ME3A LINE L1 -609 5561 5318 357 263 88 15 chr5 55291522 55291659 -144338491 - L1ME3A LINE L1 -868 5278 5132 325 313 42 21 chr5 55291693 55291837 -144338313 - L1ME3A LINE L1 -1006 5140 4994 2438 135 117 5 chr5 55291845 55292230 -144337920 - MSTA LTR MaLR 0 428 1 4415 146 6 21 chr5 55292230 55292349 -144337801 - MSTA-int LTR MaLR 0 1580 1461 2124 138 0 3 chr5 55292349 55292660 -144337490 + AluSx SINE Alu 1 310 -2 4415 146 6 21 chr5 55292660 55293247 -144336903 - MSTA-int LTR MaLR -119 1461 885 1996 129 6 9 chr5 55293236 55293562 -144336588 - MSTA-int LTR MaLR -1326 325 1 * 2361 127 135 5 chr5 55293562 55293939 -144336211 - MSTA LTR MaLR 0 428 3 337 279 164 30 chr5 55293944 55294346 -144335804 - L1ME3A LINE L1 -1158 4988 4533 1540 172 89 87 chr5 55294354 55294847 -144335303 - MER63C DNA MER1_type -436 494 1 244 35 0 0 chr5 55294973 55295002 -144335148 - MER63C DNA MER1_type -901 29 1 1025 228 93 19 chr5 55295015 55295274 -144334876 + LTR16C LTR ERVL 179 456 -35 199 54 54 0 chr5 55295418 55295455 -144334695 + GA-rich Low_complexity Low_complexity 2 40 0 1314 214 4 8 chr5 55295497 55295745 -144334405 - MLT1C LTR MaLR 0 467 221 233 271 0 34 chr5 55295750 55295809 -144334341 + C-rich Low_complexity Low_complexity 2 58 0 284 301 36 0 chr5 55295917 55296000 -144334150 - MER5B DNA MER1_type -50 128 43 914 237 47 19 chr5 55296002 55296217 -144333933 + AluJo SINE Alu 1 221 -91 271 98 0 59 chr5 55296217 55296268 -144333882 + FLAM_A SINE Alu 86 133 0 186 43 0 0 chr5 55296290 55296313 -144333837 + (CA)n Simple_repeat Simple_repeat 2 24 0 1936 148 0 7 chr5 55296333 55296624 -144333526 - AluSx SINE Alu -23 289 1 200 191 0 143 chr5 55296632 55296695 -144333455 + MER5B DNA MER1_type 124 177 -1 215 269 0 0 chr5 55296800 55296852 -144333298 - L2 LINE L2 0 3313 3262 1188 156 39 15 chr5 55297409 55297614 -144332536 - AluJo SINE Alu -102 210 1 257 310 132 88 chr5 55297705 55298137 -144332013 + L2 LINE L2 2814 3264 -8 5997 174 25 25 chr5 55298225 55298976 -144331174 - L1MC1 LINE L1 -9 6324 5571 2403 107 0 0 chr5 55298976 55299284 -144330866 + AluSg SINE Alu 1 308 -2 5997 174 25 25 chr5 55299284 55299847 -144330303 - L1MC1 LINE L1 -762 5571 5009 2271 245 28 35 chr5 55300471 55300491 -144329659 - L1MC1 LINE L1 -1100 5046 5027 1629 165 7 11 chr5 55300491 55300763 -144329387 - AluJb SINE Alu -41 271 1 2271 245 28 35 chr5 55300763 55301732 -144328418 - L1MC1 LINE L1 -1119 5027 4100 1941 130 10 3 chr5 55301735 55302027 -144328123 + AluSx SINE Alu 3 296 -16 2350 99 0 0 chr5 55303139 55303441 -144326709 - AluSg SINE Alu -8 302 1 186 43 0 0 chr5 55305336 55305359 -144324791 + (GA)n Simple_repeat Simple_repeat 1 23 0 515 271 147 23 chr5 55305777 55305995 -144324155 - L3 LINE CR1 -73 1504 1260 5194 163 29 11 chr5 55305995 55306513 -144323637 + L1MB3 LINE L1 4372 4879 -1304 1515 213 71 31 chr5 55306513 55306894 -144323256 + MSTD LTR MaLR 1 396 0 5194 163 29 11 chr5 55306894 55308148 -144322002 + L1MB3 LINE L1 4879 6173 -10 1058 56 0 0 chr5 55308148 55308274 -144321876 - AluY SINE Alu -12 299 174 554 309 124 16 chr5 55308295 55308658 -144321492 - L3 LINE CR1 -308 1269 868 2263 144 35 0 chr5 55308710 55309085 -144321065 + L1 LINE L1 4706 5093 -1053 342 288 102 58 chr5 55309273 55309499 -144320651 - MLT1K LTR MaLR -342 246 11 6389 54 32 4 chr5 55309551 55310310 -144319840 - LTR17 LTR ERV1 0 780 1 424 274 100 121 chr5 55310317 55310707 -144319443 - L3 LINE CR1 -751 826 445 481 173 70 177 chr5 55310881 55311021 -144319129 - MIR SINE MIR -27 235 129 1731 142 52 4 chr5 55311021 55311313 -144318837 + AluJb SINE Alu 1 305 0 481 173 70 177 chr5 55311313 55311414 -144318736 - MIR SINE MIR -133 129 19 2405 90 0 6 chr5 55311780 55312092 -144318058 - AluSp SINE Alu 0 313 4 2247 107 0 7 chr5 55312231 55312541 -144317609 - AluSx SINE Alu -4 308 1 2047 142 14 0 chr5 55312569 55312864 -144317286 - AluJo SINE Alu -13 299 1 759 286 94 24 chr5 55312988 55313401 -144316749 - LTR33 LTR ERVL -38 483 42 2402 205 52 14 chr5 55314249 55315177 -144314973 + L1MDa LINE L1 3 1436 -5104 445 175 0 0 chr5 55315287 55315350 -144314800 - AluJ/FLAM SINE Alu -248 64 2 2386 227 51 88 chr5 55315351 55315584 -144314566 + L1M4 LINE L1 3544 3784 -2362 2140 115 3 16 chr5 55315584 55315889 -144314261 + AluSx SINE Alu 1 301 -11 2386 227 51 88 chr5 55315889 55316301 -144313849 + L1M4 LINE L1 3784 4210 -1936 1802 115 19 8 chr5 55316301 55316561 -144313589 - AluSq SINE Alu -50 263 1 2386 227 51 88 chr5 55316561 55317161 -144312989 + L1M4 LINE L1 4210 4751 -1395 1662 175 136 16 chr5 55317161 55317543 -144312607 + MSTC LTR MaLR 1 428 0 2386 227 51 88 chr5 55317543 55317559 -144312591 + L1M4 LINE L1 4751 4766 -1380 254 310 0 0 chr5 55317566 55317637 -144312513 + MIR SINE MIR 192 262 0 279 336 35 9 chr5 55317690 55317803 -144312347 - MIR3 SINE MIR -78 130 15 520 304 117 30 chr5 55318170 55318631 -144311519 - L1ME2 LINE L1 -226 5938 5438 321 294 108 6 chr5 55318650 55318994 -144311156 - L1ME2 LINE L1 -1537 4609 4231 900 193 6 6 chr5 55319125 55319291 -144310859 + FRAM SINE Alu 1 166 0 240 368 53 0 chr5 55319352 55319447 -144310703 - L2 LINE L2 -39 3233 3134 185 413 11 11 chr5 55319538 55319630 -144310520 - L2 LINE L2 -195 3077 2986 2248 86 17 10 chr5 55319694 55319984 -144310166 - AluSx SINE Alu -20 292 1 941 209 34 34 chr5 55320309 55320544 -144309606 + MIR SINE MIR 28 262 0 504 309 98 5 chr5 55320636 55320840 -144309310 - MIR SINE MIR 0 262 40 291 295 101 23 chr5 55320965 55321094 -144309056 - MER5A DNA MER1_type -1 188 50 854 161 36 52 chr5 55321099 55321291 -144308859 + MER5A DNA MER1_type 1 189 0 26 30 0 0 chr5 55321406 55321439 -144308711 + AT_rich Low_complexity Low_complexity 1 33 0 2207 81 53 0 chr5 55322540 55322825 -144307325 - AluSp SINE Alu -13 300 1 2419 48 0 17 chr5 55323038 55323355 -144306795 + AluY SINE Alu 1 311 0 2501 49 0 3 chr5 55323860 55324146 -144306004 + AluY SINE Alu 11 295 -16 419 127 113 0 chr5 55324146 55324217 -144305933 + FLAM SINE Alu 43 121 -22 24 0 0 0 chr5 55324580 55324604 -144305546 + AT_rich Low_complexity Low_complexity 1 24 0 923 214 31 18 chr5 55325748 55325972 -144304178 + MIR SINE MIR 1 227 -35 4462 93 11 6 chr5 55325974 55326600 -144303550 + L1PA11 LINE L1 5546 6174 0 25 31 0 0 chr5 55327237 55327269 -144302881 + AT_rich Low_complexity Low_complexity 1 32 0 2290 110 15 78 chr5 55327435 55327623 -144302527 + THE1C LTR MaLR 1 152 -223 7205 31 14 0 chr5 55327623 55328793 -144301357 - L1PA4 LINE L1 -3 6152 4961 2290 110 15 78 chr5 55328793 55329004 -144301146 + THE1C LTR MaLR 152 375 0 581 274 127 65 chr5 55329222 55329325 -144300825 + L3 LINE CR1 1192 1287 -290 2200 134 3 0 chr5 55329325 55329632 -144300518 - AluSx SINE Alu -2 310 3 581 274 127 65 chr5 55329632 55329882 -144300268 + L3 LINE CR1 1287 1567 -10 1787 159 3 28 chr5 55330232 55330552 -144299598 - AluJb SINE Alu 0 312 1 6485 141 50 33 chr5 55331698 55332689 -144297461 - Tigger3b DNA MER2_type -1798 1230 258 261 0 0 0 chr5 55332689 55332718 -144297432 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2062 108 7 0 chr5 55332720 55332998 -144297152 - AluSx SINE Alu -32 280 1 6485 141 50 33 chr5 55332998 55333212 -144296938 - Tigger3b DNA MER2_type -2770 258 1 778 118 0 24 chr5 55333218 55333345 -144296805 - AluSg/x SINE Alu 0 312 189 338 0 24 0 chr5 55333463 55333505 -144296645 + (GGAA)n Simple_repeat Simple_repeat 2 44 0 2498 230 21 2 chr5 55333512 55334116 -144296034 - L1MCa LINE L1 -2052 4374 3759 2337 98 0 7 chr5 55334121 55334417 -144295733 - AluSg SINE Alu -16 294 1 2485 188 21 18 chr5 55334435 55334965 -144295185 - L1MCa LINE L1 -3530 2896 2360 1886 72 0 57 chr5 55334965 55335229 -144294921 - AluY SINE Alu -9 302 54 2485 188 21 18 chr5 55335229 55335555 -144294595 - L1MCa LINE L1 -4066 2360 2036 2579 203 88 75 chr5 55336150 55336965 -144293185 + LTR1B LTR ERV1 1 826 0 1541 241 73 44 chr5 55337029 55337548 -144292602 - L1ME1 LINE L1 -14 6152 5619 1540 62 0 0 chr5 55337777 55337956 -144292194 - AluY SINE Alu -132 179 1 1588 168 111 18 chr5 55338117 55338450 -144291700 + MLT1A1 LTR MaLR 1 364 -1 362 222 121 0 chr5 55338501 55338600 -144291550 - L2 LINE L2 -11 3302 3192 2242 111 0 7 chr5 55338671 55338969 -144291181 - AluSx SINE Alu -16 296 1 2482 46 0 0 chr5 55339176 55339490 -144290660 + AluY SINE Alu 1 314 0 1751 126 0 4 chr5 55340288 55340535 -144289615 - AluSx SINE Alu -3 309 64 267 31 0 0 chr5 55341246 55341278 -144288872 + (CA)n Simple_repeat Simple_repeat 2 33 0 591 213 28 14 chr5 55341411 55341552 -144288598 - MER69 DNA AcHobo -4 2522 2380 286 130 19 56 chr5 55341681 55341735 -144288415 - MER69 DNA AcHobo -111 66 15 24 0 0 0 chr5 55343104 55343128 -144287022 + AT_rich Low_complexity Low_complexity 1 24 0 2292 95 0 10 chr5 55343491 55343797 -144286353 - AluSx SINE Alu -9 303 1 389 244 154 32 chr5 55344027 55344183 -144285967 - MIR SINE MIR -38 224 50 593 179 222 12 chr5 55344315 55344477 -144285673 - MIR SINE MIR 0 262 67 201 74 0 0 chr5 55345060 55345087 -144285063 + (TC)n Simple_repeat Simple_repeat 2 28 0 985 104 10 78 chr5 55345098 55345291 -144284859 - AluSq SINE Alu -4 309 130 1403 180 10 80 chr5 55346202 55346333 -144283817 + AluJo SINE Alu 2 141 -171 2183 78 7 4 chr5 55346333 55346614 -144283536 + AluSc SINE Alu 1 282 -27 1403 180 10 80 chr5 55346614 55346793 -144283357 + AluJo SINE Alu 141 290 -22 2487 73 0 0 chr5 55346795 55347095 -144283055 + AluY SINE Alu 1 300 -11 288 0 0 0 chr5 55347182 55347214 -144282936 + (GA)n Simple_repeat Simple_repeat 1 32 0 2379 86 3 0 chr5 55348242 55348534 -144281616 + AluSp SINE Alu 1 293 -20 578 179 0 86 chr5 55348548 55348665 -144281485 + L1ME LINE L1 5477 5583 -583 1635 135 53 50 chr5 55348665 55349006 -144281144 + MER4A LTR ERV1 1 342 -322 2238 105 0 3 chr5 55349008 55349303 -144280847 + AluSg SINE Alu 1 294 -16 716 155 181 73 chr5 55349316 55349593 -144280557 + MER4C LTR ERV1 157 465 0 470 188 0 0 chr5 55349593 55349673 -144280477 + L1ME LINE L1 5580 5659 -507 531 298 66 40 chr5 55349745 55350047 -144280103 - L2 LINE L2 -444 2870 2561 2548 55 0 0 chr5 55350095 55350388 -144279762 - AluY SINE Alu -18 293 1 224 224 0 20 chr5 55350536 55350585 -144279565 + CT-rich Low_complexity Low_complexity 4 51 0 1919 135 0 18 chr5 55350585 55350867 -144279283 - AluSx SINE Alu -35 277 1 328 208 111 0 chr5 55351347 55351419 -144278731 + MER58B DNA MER1_type 11 90 -251 2599 65 0 7 chr5 55351443 55351752 -144278398 + AluSp SINE Alu 1 307 -6 4807 158 52 14 chr5 55351805 55352327 -144277823 + L1MB4 LINE L1 5119 5619 -561 2245 92 24 3 chr5 55352327 55352619 -144277531 + AluSx SINE Alu 1 298 -14 4807 158 52 14 chr5 55352619 55353118 -144277032 + L1MB4 LINE L1 5619 6180 0 552 133 11 22 chr5 55353116 55353206 -144276944 - L1MD1 LINE L1 -53 6189 6101 * 1307 97 0 0 chr5 55353207 55353372 -144276778 + AluSx SINE Alu 2 166 -146 316 214 14 0 chr5 55353372 55353442 -144276708 - L1MD2 LINE L1 -144 6215 6145 1022 187 64 44 chr5 55353444 55353570 -144276580 + MER58B DNA MER1_type 86 208 -2212 2303 113 26 0 chr5 55353570 55353872 -144276278 - AluSx SINE Alu -2 310 1 1022 187 64 44 chr5 55353872 55353996 -144276154 + MER58B DNA MER1_type 208 341 0 948 270 119 65 chr5 55354271 55354701 -144275449 - MLT1L LTR MaLR -13 602 197 2277 110 0 3 chr5 55354701 55355001 -144275149 + AluSx SINE Alu 1 299 -13 948 270 119 65 chr5 55355001 55355092 -144275058 - MLT1L LTR MaLR -418 197 112 2078 115 21 0 chr5 55355092 55355379 -144274771 + AluSx SINE Alu 5 297 -15 948 270 119 65 chr5 55355379 55355427 -144274723 - MLT1L LTR MaLR -503 112 1 976 72 8 8 chr5 55355612 55355737 -144274413 - AluSp SINE Alu -188 125 1 1623 169 11 4 chr5 55355753 55356025 -144274125 - AluJo SINE Alu -38 274 1 1868 137 0 18 chr5 55356055 55356332 -144273818 + AluJo SINE Alu 11 282 -30 387 0 0 0 chr5 55356335 55356378 -144273772 + (CAA)n Simple_repeat Simple_repeat 2 44 0 273 179 30 45 chr5 55356804 55356871 -144273279 + L3 LINE CR1 1493 1558 -19 2334 71 0 3 chr5 55357448 55357756 -144272394 + AluY SINE Alu 1 307 0 1694 153 27 17 chr5 55357957 55358252 -144271898 + AluJo SINE Alu 2 299 -13 458 243 104 107 chr5 55358397 55358677 -144271473 - L1MC4 LINE L1 -17 8025 7648 1319 140 5 28 chr5 55358677 55358891 -144271259 + AluJb SINE Alu 85 293 -19 2255 107 17 0 chr5 55358924 55359223 -144270927 + AluJb SINE Alu 1 304 -8 1076 93 0 0 chr5 55359507 55359647 -144270503 - AluSp/q SINE Alu -2 311 172 2067 132 3 0 chr5 55360527 55360815 -144269335 - AluSx SINE Alu -23 289 1 2141 90 17 10 chr5 55361397 55361697 -144268453 + AluSq SINE Alu 1 302 -11 515 328 123 26 chr5 55362383 55362928 -144267222 + L2 LINE L2 1404 2001 -1313 1935 143 13 23 chr5 55362937 55363245 -144266905 + AluJb SINE Alu 1 305 -7 1819 149 6 67 chr5 55363388 55363716 -144266434 - AluJb SINE Alu -4 308 1 462 325 34 21 chr5 55363717 55363954 -144266196 + L2 LINE L2 2308 2547 -767 1110 174 104 14 chr5 55363960 55364172 -144265978 - MER8 DNA MER2_type -1 238 8 2291 97 13 3 chr5 55364225 55364523 -144265627 - AluSx SINE Alu -8 304 4 2160 94 9 28 chr5 55364535 55364853 -144265297 - AluSx SINE Alu 0 312 1 254 343 51 54 chr5 55364871 55365206 -144264944 + L2 LINE L2 2568 2901 -413 2420 53 0 26 chr5 55365230 55365534 -144264616 - AluY SINE Alu -15 296 1 2041 137 0 10 chr5 55365907 55366207 -144263943 - AluSx SINE Alu -13 299 3 2303 48 19 63 chr5 55367387 55367703 -144262447 + AluY SINE Alu 1 302 -9 1330 118 6 139 chr5 55368186 55368532 -144261618 - AluSx SINE Alu -12 300 1 2408 93 0 3 chr5 55368545 55368856 -144261294 - AluSx SINE Alu -2 310 1 1227 157 15 15 chr5 55368989 55369193 -144260957 - AluJb SINE Alu -108 204 1 231 264 222 0 chr5 55369691 55369763 -144260387 + L2 LINE L2 3201 3288 -25 972 168 62 19 chr5 55369966 55370175 -144259975 + AluJo SINE Alu 93 310 -2 2217 111 3 7 chr5 55370345 55370681 -144259469 + AluSx SINE Alu 1 312 0 1853 167 27 0 chr5 55370856 55371156 -144258994 + AluJb SINE Alu 1 308 -4 1800 155 0 30 chr5 55371464 55371761 -144258389 + AluJo SINE Alu 5 292 -20 255 79 0 0 chr5 55371887 55371925 -144258225 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 3595 118 53 18 chr5 55372582 55373091 -144257059 - MER1A DNA MER1_type 0 527 1 198 0 0 0 chr5 55374230 55374252 -144255898 + (A)n Simple_repeat Simple_repeat 1 22 0 314 180 0 0 chr5 55374305 55374355 -144255795 + Tigger5 DNA MER2_type 1 50 -2273 * 1728 142 11 14 chr5 55374352 55374561 -144255589 + Tigger5 DNA MER2_type 2044 2253 -70 2044 137 3 13 chr5 55374561 55374867 -144255283 + AluJb SINE Alu 1 303 -9 1728 142 11 14 chr5 55374867 55374938 -144255212 + Tigger5 DNA MER2_type 2253 2323 0 743 50 347 8 chr5 55375384 55375505 -144254645 - AluSc SINE Alu -16 293 132 2281 70 35 0 chr5 55375506 55375792 -144254358 - AluY SINE Alu -15 296 1 252 324 0 0 chr5 55375811 55375885 -144254265 + MLT1I LTR MaLR 82 155 -254 433 219 73 0 chr5 55375964 55376060 -144254090 + MLT1I LTR MaLR 307 409 0 2274 94 3 7 chr5 55376390 55376688 -144253462 + AluSx SINE Alu 1 297 -15 194 167 0 0 chr5 55376796 55376826 -144253324 - L2 LINE L2 -23 3290 3261 370 218 97 1 chr5 55378782 55378873 -144251277 + MIR3 SINE MIR 59 157 -51 451 303 65 7 chr5 55378970 55379125 -144251025 - MIR SINE MIR -27 235 72 400 259 2 4 chr5 55379350 55379452 -144250698 + MER5A DNA MER1_type 78 189 0 23 0 0 0 chr5 55379753 55379776 -144250374 + AT_rich Low_complexity Low_complexity 1 23 0 2308 92 0 13 chr5 55379865 55380169 -144249981 + AluSx SINE Alu 1 300 -12 634 256 41 6 chr5 55380728 55380900 -144249250 + MER5B DNA MER1_type 1 178 0 570 244 112 46 chr5 55380962 55381159 -144248991 - MER63A DNA MER1_type 0 210 1 585 323 11 5 chr5 55381266 55381452 -144248698 + MIR SINE MIR 28 214 -48 530 251 56 79 chr5 55381918 55382157 -144247993 - MIR SINE MIR -14 248 19 255 61 0 0 chr5 55382417 55382450 -144247700 + (TAA)n Simple_repeat Simple_repeat 1 33 0 395 183 62 42 chr5 55382661 55382778 -144247372 + MIR SINE MIR 33 149 -62 2339 102 0 0 chr5 55382842 55383146 -144247004 - AluSx SINE Alu -8 304 1 243 321 87 36 chr5 55383355 55383551 -144246599 - L2 LINE L2 -401 2913 2708 2310 79 7 26 chr5 55384180 55384484 -144245666 - AluSx SINE Alu -14 298 1 1539 164 27 44 chr5 55384487 55384785 -144245365 + AluJo SINE Alu 12 304 -8 181 269 58 0 chr5 55384840 55384892 -144245258 + MIR3 SINE MIR 149 203 -5 658 227 151 94 chr5 55385267 55385627 -144244523 + MLT1J LTR MaLR 39 430 -81 1855 158 3 10 chr5 55385627 55385924 -144244226 - AluJb SINE Alu -17 295 1 658 227 151 94 chr5 55385924 55386008 -144244142 + MLT1J LTR MaLR 430 508 -3 1131 237 25 85 chr5 55386429 55386508 -144243642 - Charlie8 DNA MER1_type -1930 487 405 2277 85 3 0 chr5 55386508 55386790 -144243360 + AluSg SINE Alu 1 283 -27 414 0 0 0 chr5 55386790 55386836 -144243314 + (CA)n Simple_repeat Simple_repeat 2 47 0 1131 237 25 85 chr5 55386836 55387228 -144242922 - Charlie8 DNA MER1_type -2010 407 43 307 258 16 0 chr5 55387331 55387393 -144242757 - AluS SINE Alu -238 63 1 22 0 0 0 chr5 55387401 55387423 -144242727 + AT_rich Low_complexity Low_complexity 1 22 0 2016 78 16 106 chr5 55387496 55387818 -144242332 + AluSx SINE Alu 2 294 -18 209 33 33 0 chr5 55387828 55387858 -144242292 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 1770 178 0 3 chr5 55387869 55388167 -144241983 + AluJo SINE Alu 1 297 -15 211 254 88 0 chr5 55388454 55388518 -144241632 - MER5A DNA MER1_type -67 121 44 874 159 0 15 chr5 55390141 55390273 -144239877 + FLAM_C SINE Alu 4 133 0 1490 199 144 17 chr5 55390907 55391411 -144238739 + Charlie1 DNA MER1_type 5 1877 -884 410 143 33 44 chr5 55391415 55391506 -144238644 + L1MA7 LINE L1 5950 6039 -252 1314 179 0 0 chr5 55391506 55391713 -144238437 - AluSx SINE Alu -105 207 1 239 102 0 20 chr5 55391725 55391774 -144238376 + (TA)n Simple_repeat Simple_repeat 1 48 0 2192 102 3 0 chr5 55391804 55392110 -144238040 + AluSp SINE Alu 1 307 0 3021 173 15 2 chr5 55392112 55392651 -144237499 + Charlie1 DNA MER1_type 1862 2407 -354 1527 179 10 56 chr5 55392660 55392962 -144237188 + AluJo SINE Alu 1 288 -24 264 59 0 0 chr5 55392972 55393006 -144237144 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1252 135 7 161 chr5 55393020 55393076 -144237074 + Charlie1 DNA MER1_type 2398 2461 -300 2125 127 7 10 chr5 55393076 55393383 -144236767 - AluSx SINE Alu -6 306 1 1252 135 7 161 chr5 55393383 55393625 -144236525 + Charlie1 DNA MER1_type 2461 2615 -146 2302 100 0 0 chr5 55393625 55393916 -144236234 - AluSx SINE Alu -21 291 1 1252 135 7 161 chr5 55393916 55394038 -144236112 + Charlie1 DNA MER1_type 2615 2754 -7 24 32 0 0 chr5 55394250 55394281 -144235869 + AT_rich Low_complexity Low_complexity 1 31 0 610 252 66 24 chr5 55394779 55395149 -144235001 - L1MC/D LINE L1 -477 5644 5254 2259 127 0 0 chr5 55395206 55395513 -144234637 - AluSg SINE Alu -3 307 1 2080 148 0 0 chr5 55395622 55395920 -144234230 + AluSx SINE Alu 1 298 -14 3681 190 21 76 chr5 55395996 55396105 -144234045 + L1ME1 LINE L1 5186 5299 -867 2240 89 3 0 chr5 55396105 55396418 -144233732 + AluY SINE Alu 1 314 0 3681 190 21 76 chr5 55396418 55397333 -144232817 + L1ME1 LINE L1 5299 6147 -19 1827 161 3 13 chr5 55397384 55397695 -144232455 + AluJb SINE Alu 1 308 -4 1854 112 7 36 chr5 55398427 55398731 -144231419 + AluSx SINE Alu 1 295 -17 2823 7 0 0 chr5 55399002 55399303 -144230847 + AluYa5 SINE Alu 1 301 -10 884 131 105 13 chr5 55399309 55399462 -144230688 + FRAM SINE Alu 1 166 -10 2071 143 0 13 chr5 55400813 55401121 -144229029 - AluSq SINE Alu -9 304 1 225 333 13 0 chr5 55401206 55401281 -144228869 - MLT1J2 LTR MaLR -149 301 226 1307 157 60 4 chr5 55401384 55401619 -144228531 + AluJb SINE Alu 65 312 0 335 126 53 53 chr5 55401631 55401726 -144228424 - MLT1J2 LTR MaLR -332 118 24 505 295 170 18 chr5 55401763 55401987 -144228163 + MIR SINE MIR 2 259 -3 1870 157 10 10 chr5 55402082 55402382 -144227768 - AluJb SINE Alu -12 300 1 760 189 0 11 chr5 55402922 55403102 -144227048 + CT-rich Low_complexity Low_complexity 3 180 0 884 183 54 12 chr5 55403103 55403315 -144226835 - MLT1C LTR MaLR -163 227 1 454 336 97 57 chr5 55404207 55404609 -144225541 + L2 LINE L2 2836 3253 -19 216 0 0 0 chr5 55405172 55405196 -144224954 + (CA)n Simple_repeat Simple_repeat 1 24 0 207 0 0 0 chr5 55405912 55405935 -144224215 + (T)n Simple_repeat Simple_repeat 1 23 0 285 318 45 0 chr5 55406054 55406142 -144224008 - MIR SINE MIR -15 247 156 626 193 14 0 chr5 55406148 55406293 -144223857 + CT-rich Low_complexity Low_complexity 3 149 0 205 328 43 17 chr5 55406344 55406460 -144223690 - MIR3 SINE MIR -78 130 12 575 201 98 6 chr5 55406952 55407116 -144223034 + L1M4 LINE L1 4381 4559 -1587 549 193 0 0 chr5 55407126 55407214 -144222936 + MER58A DNA MER1_type 1 88 -19 288 244 51 0 chr5 55407283 55407361 -144222789 + MER58A DNA MER1_type 133 214 -10 609 223 54 24 chr5 55407370 55407536 -144222614 + L1M4 LINE L1 4572 4742 -1404 762 269 6 6 chr5 55408515 55408686 -144221464 + MIR SINE MIR 2 172 -90 219 246 0 0 chr5 55409199 55409256 -144220894 - L3b LINE CR1 -423 1160 1104 703 240 79 43 chr5 55410215 55410469 -144219681 - MLT1J2 LTR MaLR 0 450 188 536 232 0 0 chr5 55410514 55410609 -144219541 - MLT1J1 LTR MaLR -351 95 1 652 270 52 67 chr5 55410620 55410887 -144219263 + Charlie8 DNA MER1_type 2 264 -2153 1529 194 113 61 chr5 55410889 55410947 -144219203 + LTR29 LTR ERV1 1 55 -732 2301 190 72 119 chr5 55410947 55411710 -144218440 - LTR8A LTR ERV1 0 727 1 1529 194 113 61 chr5 55411710 55412254 -144217896 + LTR29 LTR ERV1 55 787 0 2227 87 0 0 chr5 55412332 55412620 -144217530 - AluY SINE Alu -5 306 19 2340 67 0 3 chr5 55413538 55413861 -144216289 + AluY SINE Alu 1 322 0 1841 140 16 57 chr5 55413956 55414338 -144215812 - MER7A DNA MER2_type -1 345 2 268 245 93 46 chr5 55414699 55414850 -144215300 - MIR SINE MIR -77 185 28 469 316 0 7 chr5 55415995 55416131 -144214019 + MIR SINE MIR 18 152 -110 770 243 5 35 chr5 55416143 55416345 -144213805 - MIR SINE MIR -1 261 66 2126 109 31 3 chr5 55416507 55416801 -144213349 - AluSg SINE Alu -8 302 1 1591 226 33 41 chr5 55417237 55417627 -144212523 - MLT1B LTR MaLR 0 390 4 2435 49 20 23 chr5 55418429 55418734 -144211416 + AluY SINE Alu 1 304 -7 435 204 115 76 chr5 55419723 55419880 -144210270 - MIR SINE MIR -10 252 90 252 86 0 0 chr5 55421822 55421857 -144208293 + (A)n Simple_repeat Simple_repeat 1 35 0 339 279 87 0 chr5 55423387 55423491 -144206659 + MIR3 SINE MIR 87 199 -9 403 107 27 0 chr5 55424276 55424351 -144205799 + GA-rich Low_complexity Low_complexity 1 77 0 2368 152 52 11 chr5 55425149 55425590 -144204560 - L1MB7 LINE L1 -1 6183 5725 2639 172 64 2 chr5 55425592 55426091 -144204059 - L1MA5 LINE L1 0 6300 5771 5867 120 3 46 chr5 55426092 55426784 -144203366 - L1PA14 LINE L1 -6 6155 5435 2128 98 0 27 chr5 55426784 55427080 -144203070 - AluSq SINE Alu -25 288 1 5867 120 3 46 chr5 55427080 55427231 -144202919 - L1PA14 LINE L1 -726 5435 5279 1918 167 0 0 chr5 55427231 55427530 -144202620 - AluSx SINE Alu -13 299 1 5867 120 3 46 chr5 55427530 55428019 -144202131 - L1PA14 LINE L1 -882 5279 4876 184 226 19 19 chr5 55428045 55428098 -144202052 - MIR SINE MIR -65 143 91 1068 163 31 75 chr5 55428129 55428356 -144201794 + MER20 DNA MER1_type 3 219 0 228 305 168 52 chr5 55428356 55428614 -144201536 + L2 LINE L2 2159 2481 -833 2071 161 54 11 chr5 55428614 55428963 -144201187 + THE1B LTR MaLR 1 364 0 228 305 168 52 chr5 55428963 55429104 -144201046 + L2 LINE L2 2481 2604 -710 307 218 264 9 chr5 55429161 55429271 -144200879 - MIR SINE MIR -79 183 46 348 330 85 30 chr5 55429320 55429520 -144200630 + L2 LINE L2 2833 3043 -229 184 374 131 0 chr5 55429505 55429604 -144200546 + L2 LINE L2 3160 3271 -1 * 3595 149 52 5 chr5 55429789 55430367 -144199783 - MER6A DNA MER2_type 0 605 1 2166 118 20 0 chr5 55431496 55431800 -144198350 - AluSq SINE Alu -3 310 1 22 35 0 0 chr5 55431811 55431840 -144198310 + AT_rich Low_complexity Low_complexity 1 29 0 1143 236 80 16 chr5 55431880 55432194 -144197956 - MLT1A1 LTR MaLR 0 365 32 1241 270 54 61 chr5 55432320 55433121 -144197029 + L2 LINE L2 2525 3313 0 197 294 174 0 chr5 55433818 55433910 -144196240 - MIR3 SINE MIR -2 206 99 2414 167 43 10 chr5 55435039 55435453 -144194697 + MSTA LTR MaLR 1 428 0 326 341 134 11 chr5 55435455 55435739 -144194411 + L3b LINE CR1 1134 1452 -131 794 172 81 27 chr5 55435747 55435933 -144194217 + L1MB5 LINE L1 4650 4845 -1301 * 1881 175 41 93 chr5 55435928 55436113 -144194037 - L1ME LINE L1 -384 5782 5589 2906 160 10 12 chr5 55436113 55436608 -144193542 - L1MB2 LINE L1 -2 6169 5676 1881 175 41 93 chr5 55436608 55436702 -144193448 - L1ME LINE L1 -577 5589 5492 7629 59 8 11 chr5 55436702 55438288 -144191862 + SVA Other Other 1 1385 -1 1881 175 41 93 chr5 55438288 55438468 -144191682 - L1ME LINE L1 -674 5492 5343 3523 221 46 31 chr5 55438655 55439635 -144190515 - L1ME LINE L1 -811 5335 4341 2395 170 132 62 chr5 55440988 55441704 -144188446 - LTR1B LTR ERV1 0 785 1 5315 168 10 11 chr5 55441709 55442703 -144187447 + L1MB5 LINE L1 5173 6173 -1 10652 147 116 48 chr5 55443610 55445394 -144184756 + L1MCa LINE L1 5 1667 -4759 1789 178 7 3 chr5 55445394 55445686 -144184464 + AluJb SINE Alu 1 293 -19 10652 147 116 48 chr5 55445686 55445873 -144184277 + L1MCa LINE L1 1667 1840 -4586 2530 64 0 0 chr5 55445873 55446170 -144183980 - AluY SINE Alu -13 298 2 10652 147 116 48 chr5 55446170 55446482 -144183668 + L1MCa LINE L1 1840 2443 -3983 3529 229 37 13 chr5 55447602 55448622 -144181528 + L1MCa LINE L1 2429 3473 -2953 4388 176 38 29 chr5 55448622 55449449 -144180701 - L1PA12 LINE L1 -6589 992 159 588 64 0 0 chr5 55449748 55449826 -144180324 - L1HS LINE L1 0 6155 6078 445 200 13 20 chr5 55450459 55450609 -144179541 + CT-rich Low_complexity Low_complexity 3 151 0 441 0 0 0 chr5 55453912 55453961 -144176189 + (TA)n Simple_repeat Simple_repeat 1 49 0 414 191 127 48 chr5 55453980 55454106 -144176044 + MER103 DNA DNA 29 164 -2 11877 159 36 2 chr5 55454357 55457823 -144172327 + L1PA14 LINE L1 1278 4866 -2718 9446 158 26 1 chr5 55457830 55458454 -144171696 + L1PA14 LINE L1 5146 5753 -1846 2726 7 0 0 chr5 55458454 55458745 -144171405 + AluYb8 SINE Alu 28 318 0 9446 158 26 1 chr5 55458745 55459622 -144170528 + L1PA14 LINE L1 5753 6606 -993 2387 73 6 13 chr5 55459622 55459935 -144170215 + AluY SINE Alu 1 311 0 9446 158 26 1 chr5 55459935 55460874 -144169276 + L1PA14 LINE L1 6606 7580 -19 1939 204 49 0 chr5 55461192 55461540 -144168610 - MLT1A1 LTR MaLR 0 365 1 1636 240 59 42 chr5 55461687 55462283 -144167867 - L1M4c LINE L1 -4551 1833 1228 186 43 0 0 chr5 55462293 55462316 -144167834 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 6549 80 13 5 chr5 55462321 55463738 -144166412 - SVA Other Other -839 1369 58 468 51 0 0 chr5 55463738 55463797 -144166353 + (GGGAGA)n Simple_repeat Simple_repeat 2 60 0 253 276 26 0 chr5 55464011 55464087 -144166063 - MIR3 SINE MIR -21 187 110 2256 110 0 0 chr5 55464769 55465061 -144165089 - AluSx SINE Alu -16 296 5 336 143 0 0 chr5 55466087 55466143 -144164007 + L1MB2 LINE L1 5936 5991 -180 28 71 0 0 chr5 55466688 55466744 -144163406 + AT_rich Low_complexity Low_complexity 1 56 0 850 276 197 30 chr5 55468812 55468885 -144161265 - L3 LINE CR1 -287 1290 1231 2457 79 0 0 chr5 55468885 55469188 -144160962 + AluSq SINE Alu 1 303 -10 850 276 197 30 chr5 55469188 55469646 -144160504 - L3 LINE CR1 -346 1231 670 195 162 0 0 chr5 55470909 55470946 -144159204 + T-rich Low_complexity Low_complexity 1 37 0 232 143 0 0 chr5 55471380 55471415 -144158735 + Alu SINE Alu 273 307 -13 685 276 109 0 chr5 55471660 55471870 -144158280 - MIR SINE MIR 0 262 30 1408 184 24 20 chr5 55471883 55472176 -144157974 - MER33 DNA MER1_type -14 310 17 247 288 176 8 chr5 55472307 55472432 -144157718 - MER91A DNA MER1_type -1 195 50 1537 245 31 58 chr5 55473338 55473822 -144156328 + L1ME3A LINE L1 5504 5975 -195 2443 57 30 0 chr5 55473896 55474197 -144155953 - AluY SINE Alu -1 310 1 274 287 43 0 chr5 55474238 55474332 -144155818 + MER112 DNA MER1_type 157 254 -6 535 241 8 30 chr5 55474369 55474502 -144155648 + MIR SINE MIR 99 228 -34 233 214 0 0 chr5 55477002 55477044 -144153106 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 1242 204 111 63 chr5 55478565 55479007 -144151143 + LTR37B LTR ERV1 6 468 0 1752 189 0 10 chr5 55479620 55479916 -144150234 - AluJo SINE Alu -14 298 6 1251 173 0 19 chr5 55479945 55480159 -144149991 + AluJo SINE Alu 88 297 -15 339 25 0 0 chr5 55481199 55481239 -144148911 + (TG)n Simple_repeat Simple_repeat 2 41 0 3356 89 11 20 chr5 55481372 55481820 -144148330 - MLT2A1 LTR ERVL 0 444 1 180 0 0 0 chr5 55482673 55482693 -144147457 + (TTG)n Simple_repeat Simple_repeat 2 21 0 204 235 20 0 chr5 55482928 55482979 -144147171 - L2 LINE L2 -1 3312 3261 231 350 120 8 chr5 55483242 55483359 -144146791 + L2 LINE L2 3140 3269 -3 221 164 0 109 chr5 55484194 55484217 -144145933 + MIR SINE MIR 82 106 -102 2226 143 110 15 chr5 55484217 55484608 -144145542 + MSTA LTR MaLR 1 428 0 221 164 0 109 chr5 55484608 55484639 -144145511 + MIR SINE MIR 106 130 -78 547 301 70 48 chr5 55485182 55485647 -144144503 - L2 LINE L2 -25 3288 2737 685 262 47 52 chr5 55485649 55486012 -144144138 - L1MEc LINE L1 -5040 1356 996 195 308 39 26 chr5 55487380 55487458 -144142692 - MIR SINE MIR -100 108 30 252 0 0 0 chr5 55487819 55487847 -144142303 + (T)n Simple_repeat Simple_repeat 1 28 0 270 170 0 0 chr5 55487899 55487946 -144142204 - L2 LINE L2 0 3313 3267 1232 247 70 22 chr5 55488024 55488425 -144141725 + LTR16C LTR ERVL 61 480 -11 345 172 31 0 chr5 55488611 55488675 -144141475 + MER116 DNA Mariner 1 66 -14 1525 163 8 0 chr5 55488769 55489015 -144141135 - AluSx SINE Alu -64 248 1 741 285 91 7 chr5 55489108 55489382 -144140768 - MLT1J LTR MaLR -205 306 10 219 69 0 0 chr5 55489525 55489554 -144140596 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2094 140 3 3 chr5 55489657 55489964 -144140186 - AluSx SINE Alu -5 307 1 388 305 129 14 chr5 55490410 55491065 -144139085 - L1MC/D LINE L1 -655 5587 4860 453 36 0 0 chr5 55491195 55491250 -144138900 + (CA)n Simple_repeat Simple_repeat 2 56 0 390 348 39 0 chr5 55491840 55492021 -144138129 + MIR3 SINE MIR 13 200 -8 380 273 63 81 chr5 55492867 55493138 -144137012 + L2 LINE L2 2804 3069 -203 28 29 0 0 chr5 55493590 55493625 -144136525 + AT_rich Low_complexity Low_complexity 1 35 0 488 273 132 52 chr5 55494447 55494810 -144135340 + MLT1L LTR MaLR 164 555 -60 432 226 39 20 chr5 55494885 55494987 -144135163 - L2 LINE L2 -1 3271 3168 3577 145 21 50 chr5 55496196 55496624 -144133526 + MER6A DNA MER2_type 4 443 -422 2532 62 3 0 chr5 55496624 55496931 -144133219 + AluY SINE Alu 1 308 -3 3577 145 21 50 chr5 55496931 55496942 -144133208 + MER6A DNA MER2_type 443 453 -412 1790 154 3 20 chr5 55496942 55497240 -144132910 - AluJo SINE Alu -19 293 1 3577 145 21 50 chr5 55497240 55497419 -144132731 + MER6A DNA MER2_type 453 605 0 325 387 0 0 chr5 55497497 55497616 -144132534 - L2 LINE L2 -15 3257 3139 2762 135 36 2 chr5 55499103 55499517 -144130633 - MSTA LTR MaLR 0 428 1 466 301 31 0 chr5 55499532 55499695 -144130455 + MIR3 SINE MIR 32 199 -9 287 94 0 19 chr5 55501534 55501587 -144128563 + (TC)n Simple_repeat Simple_repeat 2 53 0 351 0 0 0 chr5 55501587 55501626 -144128524 + (CA)n Simple_repeat Simple_repeat 1 39 0 929 268 62 78 chr5 55501704 55502233 -144127917 + L1MC/D LINE L1 50 570 -5549 5598 102 25 0 chr5 55502235 55503023 -144127127 + L1PB1 LINE L1 5342 6149 -2 331 195 153 25 chr5 55503100 55503218 -144126932 + L1MC/D LINE L1 661 793 -5326 557 253 119 36 chr5 55503332 55503797 -144126353 + L1MC/D LINE L1 4926 5429 -732 228 275 29 43 chr5 55503800 55503869 -144126281 + L1MC/D LINE L1 5510 5577 -2214 2172 140 17 42 chr5 55504129 55504160 -144125990 - MER7A DNA MER2_type -2692 346 316 2254 113 3 0 chr5 55504160 55504471 -144125679 - AluSx SINE Alu 0 312 1 2172 140 17 42 chr5 55504471 55504796 -144125354 - MER7A DNA MER2_type -2722 316 1 232 311 0 0 chr5 55505025 55505086 -144125064 - L2 LINE L2 -1 3312 3252 825 259 24 5 chr5 55505311 55505516 -144124634 - MIR SINE MIR -36 226 18 196 286 0 18 chr5 55505602 55505658 -144124492 - MIR3 SINE MIR -3 205 151 302 296 130 0 chr5 55505667 55505775 -144124375 + L2 LINE L2 3192 3313 0 293 300 20 20 chr5 55505930 55506030 -144124120 - MIR3 SINE MIR -46 162 63 365 344 34 18 chr5 55507267 55507651 -144122499 - L1MC4a LINE L1 -1810 5998 5609 1832 179 50 30 chr5 55507690 55508053 -144122097 - MLT1A2 LTR MaLR 0 374 5 2795 236 102 15 chr5 55508152 55509017 -144121133 + L1MEd LINE L1 2093 3032 -3097 309 280 102 59 chr5 55509161 55509347 -144120803 - LTR67 LTR ERVL -265 292 99 329 282 73 8 chr5 55509929 55510053 -144120097 - LTR67 LTR ERVL -2 555 424 195 129 0 0 chr5 55510103 55510134 -144120016 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2295 111 0 3 chr5 55510567 55510873 -144119277 + AluSx SINE Alu 1 305 -7 24 0 0 0 chr5 55510873 55510897 -144119253 + AT_rich Low_complexity Low_complexity 1 24 0 297 285 46 15 chr5 55510897 55511027 -144119123 - L1MC/D LINE L1 -1959 5849 5716 436 274 18 0 chr5 55511268 55511381 -144118769 + MIR3 SINE MIR 60 174 -34 358 250 258 0 chr5 55512070 55512198 -144117952 + MIR SINE MIR 49 209 -53 269 380 33 0 chr5 55513176 55513268 -144116882 + L2 LINE L2 3200 3294 -19 241 239 0 0 chr5 55513228 55513274 -144116876 + MIR SINE MIR 210 255 -7 * 368 256 55 70 chr5 55513284 55513483 -144116667 - MLT1L LTR MaLR 0 615 420 439 153 35 132 chr5 55513483 55513627 -144116523 + L2 LINE L2 2679 2808 -506 913 189 9 60 chr5 55513639 55513856 -144116294 + L2 LINE L2 3108 3313 0 340 274 137 64 chr5 55513860 55514094 -144116056 - MLT1L LTR MaLR -161 454 204 416 299 47 24 chr5 55514947 55515074 -144115076 + L2 LINE L2 3143 3272 0 243 311 106 38 chr5 55516303 55516435 -144113715 - MIR SINE MIR -54 208 68 1745 209 30 51 chr5 55516870 55517340 -144112810 + MLT1C LTR MaLR 1 460 -7 774 180 8 0 chr5 55517432 55517554 -144112596 - FRAM SINE Alu -14 162 40 195 42 0 0 chr5 55517568 55517592 -144112558 + (TG)n Simple_repeat Simple_repeat 1 24 0 559 236 14 35 chr5 55518222 55518366 -144111784 - MER58B DNA MER1_type -10 331 191 1313 243 21 19 chr5 55518562 55518936 -144111214 - LTR16A LTR ERVL -60 390 16 763 234 35 72 chr5 55518936 55519226 -144110924 - MLT2C1 LTR ERVL 0 397 119 315 398 45 6 chr5 55522414 55522590 -144107560 + MIR3 SINE MIR 15 197 -11 187 286 125 0 chr5 55523254 55523310 -144106840 - L2 LINE L2 0 3313 3251 930 230 15 5 chr5 55523365 55523561 -144106589 + MER58 DNA MER1_type 1 198 -143 1858 222 99 38 chr5 55523561 55524146 -144106004 + MLT1E1 LTR MaLR 1 621 -33 1951 157 142 49 chr5 55524271 55525047 -144105103 - pTR5 LTR ERV1 -495 1683 31 406 209 33 0 chr5 55525471 55525562 -144104588 + MIR SINE MIR 107 200 -62 2587 98 35 19 chr5 55525625 55525994 -144104156 + THE1C LTR MaLR 1 375 0 233 273 109 79 chr5 55526276 55526450 -144103700 + MIR3 SINE MIR 10 181 -27 427 261 68 51 chr5 55527240 55527416 -144102734 + MIR SINE MIR 83 261 -1 185 206 0 16 chr5 55527694 55527757 -144102393 + (CAT)n Simple_repeat Simple_repeat 1 62 0 1788 141 14 84 chr5 55527763 55528133 -144102017 - L1MB5 LINE L1 -286 5888 5545 21 0 0 0 chr5 55529103 55529124 -144101026 + AT_rich Low_complexity Low_complexity 1 21 0 3644 107 68 25 chr5 55529124 55529723 -144100427 - L1PA16 LINE L1 -9 6157 5533 1001 132 27 36 chr5 55529886 55530106 -144100044 - Tigger6a DNA MER2_type -97 986 769 1624 216 92 25 chr5 55530166 55530610 -144099540 - MER74B LTR ERVL -93 529 56 3248 176 35 61 chr5 55530618 55531392 -144098758 - Tigger6a DNA MER2_type -306 777 24 207 179 0 75 chr5 55531983 55532050 -144098100 + (TATG)n Simple_repeat Simple_repeat 1 62 0 996 307 95 16 chr5 55532246 55532699 -144097451 - LTR16C LTR ERVL 0 491 3 645 181 87 14 chr5 55532710 55532848 -144097302 - MIR SINE MIR -31 231 84 269 263 25 0 chr5 55533700 55533780 -144096370 + (TA)n Simple_repeat Simple_repeat 1 82 0 319 301 228 0 chr5 55534108 55534244 -144095906 - MIR3 SINE MIR -16 192 26 860 279 67 4 chr5 55535475 55535715 -144094435 - MIR SINE MIR -6 256 2 460 242 71 50 chr5 55535776 55535974 -144094176 - L2 LINE L2 0 3313 3112 418 303 64 32 chr5 55536035 55536286 -144093864 - LTR16C LTR ERVL -36 455 197 446 303 97 12 chr5 55536511 55536801 -144093349 - L2 LINE L2 -258 3055 2739 1984 111 0 0 chr5 55537148 55537439 -144092711 - AluSg SINE Alu 0 301 11 269 26 0 26 chr5 55537673 55537712 -144092438 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1783 148 0 11 chr5 55537714 55537997 -144092153 - AluJb SINE Alu -32 280 1 321 192 0 0 chr5 55537997 55538049 -144092101 + Tigger6a DNA MER2_type 1032 1083 0 446 315 130 5 chr5 55538073 55538289 -144091861 + MIR SINE MIR 7 249 -13 307 340 0 19 chr5 55538288 55538391 -144091759 + L2 LINE L2 3199 3299 -14 * 742 285 52 44 chr5 55538756 55539046 -144091104 + L1ME LINE L1 5392 5687 -434 2159 105 10 0 chr5 55539046 55539351 -144090799 - AluSq SINE Alu -5 308 1 742 285 52 44 chr5 55539351 55539425 -144090725 + L1ME LINE L1 5687 5759 -362 393 313 145 19 chr5 55539584 55539798 -144090352 - MIR SINE MIR -3 259 19 181 211 96 0 chr5 55541031 55541083 -144089067 + L3 LINE CR1 1341 1397 -180 884 217 66 9 chr5 55541741 55541953 -144088197 - MER58A DNA MER1_type 0 224 1 225 274 0 14 chr5 55542038 55542111 -144088039 - MLT1L LTR MaLR -77 538 467 273 263 0 0 chr5 55542372 55542429 -144087721 + L2 LINE L2 3256 3312 -1 652 128 8 8 chr5 55542471 55542596 -144087554 + (GGAA)n Simple_repeat Simple_repeat 2 126 0 1742 105 0 20 chr5 55544184 55544465 -144085685 + AluSx SINE Alu 40 315 0 324 309 45 51 chr5 55545905 55546083 -144084067 - MLT1J2 LTR MaLR -34 416 240 2191 112 0 13 chr5 55546448 55546582 -144083568 + AluSx SINE Alu 3 137 -175 2346 75 0 13 chr5 55546582 55546889 -144083261 + AluY SINE Alu 1 303 -8 2191 112 0 13 chr5 55546889 55547068 -144083082 + AluSx SINE Alu 137 312 0 618 158 53 0 chr5 55547240 55547354 -144082796 - L1MB2 LINE L1 -3 6168 6049 2546 158 36 2 chr5 55547520 55547969 -144082181 - L1MB2 LINE L1 -1 6170 5707 234 91 0 0 chr5 55548033 55548066 -144082084 + (TG)n Simple_repeat Simple_repeat 1 33 0 694 189 91 0 chr5 55549232 55549375 -144080775 - MER34 LTR ERV1 -3 539 384 1118 30 8 0 chr5 55549375 55549509 -144080641 - L1PA4 LINE L1 -298 5857 5723 1956 58 113 4 chr5 55549509 55549781 -144080369 + L1PA4 LINE L1 5852 6155 0 1332 224 132 11 chr5 55549785 55550133 -144080017 - MER34 LTR ERV1 -142 400 11 1727 96 0 0 chr5 55551427 55551676 -144078474 + AluY SINE Alu 50 298 -13 530 294 118 13 chr5 55552102 55552330 -144077820 + MIR SINE MIR 1 252 -10 27 87 0 0 chr5 55552336 55552405 -144077745 + AT_rich Low_complexity Low_complexity 1 69 0 218 188 0 77 chr5 55552405 55552500 -144077650 + (TAA)n Simple_repeat Simple_repeat 1 87 -21 1773 155 18 0 chr5 55552500 55552784 -144077366 + AluSx SINE Alu 1 289 -23 218 188 0 77 chr5 55552784 55552805 -144077345 + (TAA)n Simple_repeat Simple_repeat 87 108 0 1683 206 19 32 chr5 55553283 55553662 -144076488 - MLT1A2 LTR MaLR 0 374 1 633 204 145 7 chr5 55554136 55554288 -144075862 - MER45A DNA AcHobo -5 173 1 33 43 0 0 chr5 55555265 55555312 -144074838 + GC_rich Low_complexity Low_complexity 1 47 0 1833 126 0 0 chr5 55556778 55557048 -144073102 - AluSx SINE Alu -13 299 30 2173 98 0 0 chr5 55557289 55557585 -144072565 - AluSg SINE Alu -14 296 1 483 321 56 15 chr5 55559158 55559354 -144070796 - MIR SINE MIR -57 205 2 340 317 93 68 chr5 55559859 55560181 -144069969 + L2 LINE L2 2922 3251 -21 933 340 20 18 chr5 55560245 55560645 -144069505 - MER115 DNA AcHobo -253 440 40 360 94 0 0 chr5 55560801 55560854 -144069296 + (GA)n Simple_repeat Simple_repeat 1 53 0 521 320 151 43 chr5 55560861 55561505 -144068645 - L2 LINE L2 -818 2496 1743 207 0 0 0 chr5 55561505 55561528 -144068622 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 521 320 151 43 chr5 55561528 55561702 -144068448 - L2 LINE L2 -1571 1743 1589 1583 242 37 14 chr5 55561703 55562128 -144068022 - LTR16A LTR ERVL 0 450 16 773 234 35 72 chr5 55562128 55562418 -144067732 - MLT2C1 LTR ERVL 0 397 119 209 221 144 19 chr5 55564312 55564416 -144065734 + MIR SINE MIR 28 144 -118 2418 166 26 2 chr5 55564653 55565075 -144065075 - MSTB1 LTR MaLR 0 432 1 438 245 178 29 chr5 55565213 55565454 -144064696 + MARNA DNA Mariner 148 424 -162 313 254 166 57 chr5 55565474 55565673 -144064477 + MIR SINE MIR 2 218 -44 1036 239 18 9 chr5 55565763 55565989 -144064161 - MIR SINE MIR -1 261 34 248 226 0 0 chr5 55566070 55566123 -144064027 + (TG)n Simple_repeat Simple_repeat 1 53 0 200 212 167 0 chr5 55566430 55566496 -144063654 - MIR SINE MIR -111 151 75 360 0 0 0 chr5 55567118 55567158 -144062992 + (TA)n Simple_repeat Simple_repeat 2 41 0 270 0 0 0 chr5 55567158 55567188 -144062962 + (T)n Simple_repeat Simple_repeat 1 30 0 21 71 0 0 chr5 55567451 55567493 -144062657 + AT_rich Low_complexity Low_complexity 1 42 0 1579 226 59 66 chr5 55567597 55568158 -144061992 + LTR67 LTR ERVL 1 557 0 456 270 56 27 chr5 55569316 55569560 -144060590 - MLT1L LTR MaLR -5 610 320 195 42 0 0 chr5 55569560 55569584 -144060566 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 456 270 56 27 chr5 55569584 55569687 -144060463 - MLT1L LTR MaLR -295 320 221 197 284 68 0 chr5 55570678 55570752 -144059398 - L3 LINE CR1 -469 1108 1030 500 170 28 47 chr5 55571037 55571143 -144059007 + MIR SINE MIR 116 219 -43 2275 90 0 23 chr5 55571986 55572285 -144057865 + AluSg SINE Alu 1 292 -18 349 303 45 41 chr5 55573135 55573356 -144056794 - L3 LINE CR1 -50 1527 1306 537 261 139 0 chr5 55573366 55573546 -144056604 + MIR SINE MIR 2 206 -56 2046 88 0 27 chr5 55573653 55573915 -144056235 - AluSc SINE Alu -19 290 36 305 317 130 0 chr5 55573945 55574068 -144056082 + MER117 DNA MER1_type 55 193 -4 23 0 0 0 chr5 55574097 55574120 -144056030 + AT_rich Low_complexity Low_complexity 1 23 0 1765 182 48 24 chr5 55575001 55575380 -144054770 + MLT1B LTR MaLR 1 388 -2 221 320 12 15 chr5 55576238 55576361 -144053789 - MIR SINE MIR -78 130 25 216 0 0 0 chr5 55578188 55578212 -144051938 + (A)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr5 55578251 55578273 -144051877 + AT_rich Low_complexity Low_complexity 1 22 0 874 239 0 5 chr5 55578378 55578562 -144051588 + MER69 DNA AcHobo 24 206 -2320 369 228 89 0 chr5 55578638 55578739 -144051411 + MER69 DNA AcHobo 2407 2516 -10 229 274 14 14 chr5 55579707 55579780 -144050370 + MIR3 SINE MIR 87 159 -49 601 255 138 21 chr5 55580004 55580243 -144049907 + MLT1I LTR MaLR 112 378 -31 4721 124 147 70 chr5 55580243 55581522 -144048628 + pTR5 LTR ERV1 745 2438 0 2190 101 21 0 chr5 55581644 55581932 -144048218 - AluSg SINE Alu -16 294 1 1354 251 72 40 chr5 55583166 55583735 -144046415 - L1MC4a LINE L1 -1748 6060 5474 238 287 74 28 chr5 55583735 55583843 -144046307 - L1MC4a LINE L1 -2276 5532 5420 * 528 264 43 6 chr5 55583832 55583995 -144046155 - L1ME3A LINE L1 0 6170 6002 309 233 105 23 chr5 55584087 55584220 -144045930 - L1MC4a LINE L1 -2409 5399 5256 2445 180 24 15 chr5 55586805 55587261 -144042889 + MER66B LTR ERV1 27 486 0 261 330 52 62 chr5 55587294 55587488 -144042662 - MLT1L LTR MaLR -403 212 21 221 279 0 70 chr5 55588603 55588689 -144041461 + L2 LINE L2 3193 3272 0 22 56 0 0 chr5 55590016 55590052 -144040098 + AT_rich Low_complexity Low_complexity 1 36 0 490 289 108 15 chr5 55590126 55590330 -144039820 + MIR SINE MIR 29 251 -11 816 265 27 0 chr5 55590438 55590657 -144039493 - MIR SINE MIR -25 237 13 2427 135 36 73 chr5 55590770 55591274 -144038876 - LTR12 LTR ERV1 0 714 230 311 295 90 13 chr5 55591513 55591669 -144038481 - MIR SINE MIR -76 186 19 207 0 0 0 chr5 55592815 55592838 -144037312 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 457 241 161 6 chr5 55592885 55593047 -144037103 + MIR SINE MIR 3 189 -73 206 265 248 0 chr5 55594968 55595085 -144035065 - MER5A DNA MER1_type -18 171 26 275 296 86 0 chr5 55595166 55595247 -144034903 - L2 LINE L2 -49 3223 3136 873 161 202 23 chr5 55595516 55595734 -144034416 - LTR37B LTR ERV1 -14 454 198 428 301 66 0 chr5 55596042 55596208 -144033942 - MIR SINE MIR -38 224 48 379 262 8 49 chr5 55596898 55597020 -144033130 + MER5A DNA MER1_type 44 160 -29 1973 139 3 3 chr5 55597097 55597385 -144032765 - AluJb SINE Alu -19 293 6 413 209 209 0 chr5 55597525 55597659 -144032491 - MER5A DNA MER1_type 0 189 28 2022 197 66 9 chr5 55597732 55598158 -144031992 - MLT1D LTR MaLR 0 505 56 461 123 14 0 chr5 55598158 55598231 -144031919 + L1P5 LINE L1 5705 5778 -373 253 106 0 0 chr5 55598231 55598278 -144031872 + LTR66 LTR ERVL 392 438 -172 313 298 0 0 chr5 55598285 55598369 -144031781 - L1MC4 LINE L1 -1339 6703 6620 307 232 0 53 chr5 55598287 55598382 -144031768 + L1MC4 LINE L1 6614 6703 -1339 * 2779 84 0 3 chr5 55598441 55598811 -144031339 + L1PB1 LINE L1 5783 6151 0 253 129 97 113 chr5 55598816 55598878 -144031272 - MLT1D LTR MaLR -444 61 1 572 328 48 27 chr5 55600140 55600582 -144029568 + L2 LINE L2 2804 3254 -59 205 219 82 27 chr5 55602181 55602254 -144027896 + L2 LINE L2 3196 3272 0 243 217 25 124 chr5 55602523 55602541 -144027609 + MIR3 SINE MIR 79 97 -111 1184 177 5 5 chr5 55602541 55602750 -144027400 - MER3 DNA MER1_type 0 209 1 243 217 25 124 chr5 55602750 55602837 -144027313 + MIR3 SINE MIR 97 187 -21 309 328 62 11 chr5 55603210 55603387 -144026763 + MIR3 SINE MIR 17 202 -6 417 314 101 24 chr5 55604298 55604505 -144025645 - MIR SINE MIR -19 243 21 1264 177 27 0 chr5 55604589 55604809 -144025341 - MLT1D LTR MaLR 0 505 280 581 215 0 0 chr5 55604799 55604906 -144025244 - MLT1D LTR MaLR -398 107 1 * 2476 81 3 0 chr5 55605854 55606164 -144023986 - AluSp SINE Alu -2 311 1 325 307 18 9 chr5 55606875 55606989 -144023161 + MIR SINE MIR 88 202 -60 25 75 0 0 chr5 55607397 55607450 -144022700 + AT_rich Low_complexity Low_complexity 1 53 0 308 267 20 0 chr5 55607465 55607566 -144022584 + (TA)n Simple_repeat Simple_repeat 2 104 0 455 271 42 21 chr5 55608366 55608510 -144021640 + MIR3 SINE MIR 17 163 -45 1828 214 116 51 chr5 55608666 55609250 -144020900 + MLT1E3 LTR MaLR 3 624 0 428 257 55 14 chr5 55610033 55610176 -144019974 + MIR SINE MIR 19 170 -74 1685 170 28 7 chr5 55610659 55610942 -144019208 + AluJb SINE Alu 1 289 -23 2305 92 0 7 chr5 55610951 55611244 -144018906 + AluSq SINE Alu 1 291 -22 180 229 21 21 chr5 55611632 55611680 -144018470 + MIR SINE MIR 87 134 -74 254 206 397 0 chr5 55611798 55611924 -144018226 - MER5A DNA MER1_type -1 188 13 1182 197 66 71 chr5 55612015 55612119 -144018031 + L1MB7 LINE L1 5822 5925 -259 2511 4 0 0 chr5 55612119 55612384 -144017766 - AluYa5 SINE Alu -7 304 40 1182 197 66 71 chr5 55612384 55612644 -144017506 + L1MB7 LINE L1 5925 6184 0 898 182 29 0 chr5 55613157 55613327 -144016823 + MER5A DNA MER1_type 14 188 -1 225 0 0 0 chr5 55613351 55613376 -144016774 + (CA)n Simple_repeat Simple_repeat 1 25 0 292 309 0 0 chr5 55613443 55613537 -144016613 - MER117 DNA MER1_type -4 193 100 364 326 48 20 chr5 55614616 55614763 -144015387 - MIR3 SINE MIR -39 169 19 222 161 71 0 chr5 55615595 55615651 -144014499 + (CTGTG)n Simple_repeat Simple_repeat 3 62 0 4520 82 38 71 chr5 55615754 55616552 -144013598 + Tigger3(Golem) DNA MER2_type 2259 3029 0 2247 230 55 59 chr5 55616561 55616617 -144013533 + L1ME3 LINE L1 4851 4906 -1256 597 100 0 0 chr5 55616617 55616697 -144013453 - MADE1 DNA Mariner 0 80 1 2247 230 55 59 chr5 55616697 55617993 -144012157 + L1ME3 LINE L1 4906 6125 -37 280 232 24 120 chr5 55618442 55618567 -144011583 + MARNA DNA Mariner 161 273 -313 184 230 0 48 chr5 55620137 55620263 -144009887 + GA-rich Low_complexity Low_complexity 2 121 0 239 215 7 47 chr5 55620315 55620464 -144009686 + GA-rich Low_complexity Low_complexity 2 144 0 428 206 24 18 chr5 55620480 55620645 -144009505 + GA-rich Low_complexity Low_complexity 1 166 0 1649 134 65 34 chr5 55623204 55623301 -144006849 - Tigger3(Golem) DNA MER2_type -2728 301 208 1635 202 7 3 chr5 55623301 55623598 -144006552 - AluJo SINE Alu -14 298 1 1649 134 65 34 chr5 55623598 55623792 -144006358 - Tigger3(Golem) DNA MER2_type -2821 208 1 558 238 42 26 chr5 55623813 55624006 -144006144 - L1M4 LINE L1 -1314 4832 4637 2244 149 73 27 chr5 55624008 55624417 -144005733 + MSTA LTR MaLR 1 428 0 9633 167 16 4 chr5 55624417 55626049 -144004101 + MSTA-int LTR MaLR 1 1651 0 234 273 109 9 chr5 55626198 55626308 -144003842 + MLT1L LTR MaLR 152 272 -343 431 313 157 8 chr5 55626336 55626585 -144003565 + MLT1L LTR MaLR 330 615 0 364 209 70 52 chr5 55627732 55627847 -144002303 + MER5B DNA MER1_type 5 121 -57 250 288 42 0 chr5 55627953 55628038 -144002112 + MIR SINE MIR 60 153 -63 281 282 165 16 chr5 55628623 55628811 -144001339 - MIR SINE MIR 0 262 47 364 250 125 0 chr5 55634831 55634951 -143995199 + MIR SINE MIR 1 135 -127 396 132 176 0 chr5 55634957 55635025 -143995125 - MADE1 DNA Mariner 0 80 1 184 267 17 17 chr5 55635025 55635085 -143995065 + MIR SINE MIR 203 262 0 438 326 6 66 chr5 55635348 55635484 -143994666 + MIR3 SINE MIR 30 154 -54 985 201 0 46 chr5 55635484 55635703 -143994447 + MER3 DNA MER1_type 1 209 0 438 326 6 66 chr5 55635703 55635747 -143994403 + MIR3 SINE MIR 154 199 -9 481 312 32 0 chr5 55636008 55636194 -143993956 - MIR SINE MIR -39 223 32 459 235 81 72 chr5 55636201 55636422 -143993728 - L1ME3A LINE L1 0 6170 5948 437 283 9 0 chr5 55636569 55636682 -143993468 - L2 LINE L2 0 3313 3200 1276 277 115 12 chr5 55638498 55639013 -143991137 - L2 LINE L2 0 3313 2742 204 353 10 20 chr5 55639444 55639546 -143990604 + L2 LINE L2 2943 3043 -229 404 227 86 29 chr5 55640350 55640495 -143989655 + MIR SINE MIR 40 191 -71 2300 96 7 0 chr5 55640499 55640792 -143989358 + AluSg SINE Alu 1 295 -15 1293 274 94 11 chr5 55641397 55641918 -143988232 + L1ME4a LINE L1 5293 5856 -265 664 286 65 33 chr5 55642607 55642852 -143987298 + MIR SINE MIR 8 260 -2 1165 246 122 25 chr5 55642893 55643345 -143986805 - MLT1F1 LTR MaLR -78 489 1 2561 123 65 4 chr5 55643556 55643983 -143986167 + MER1A DNA MER1_type 2 529 0 216 0 0 0 chr5 55644381 55644405 -143985745 + (A)n Simple_repeat Simple_repeat 1 24 0 245 164 211 39 chr5 55644547 55644651 -143985499 + L1ME1 LINE L1 4519 4640 -1506 1254 143 124 27 chr5 55644658 55644917 -143985233 - MSTA LTR MaLR 0 428 145 1513 212 64 67 chr5 55645280 55645506 -143984644 + L1ME1 LINE L1 5440 5666 -500 2377 110 0 0 chr5 55645506 55645816 -143984334 + AluSg SINE Alu 1 310 0 1513 212 64 67 chr5 55645816 55645995 -143984155 + L1ME1 LINE L1 5666 5844 -322 447 281 85 18 chr5 55646019 55646183 -143983967 - MIR SINE MIR -50 212 38 189 213 0 0 chr5 55648053 55648100 -143982050 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 207 286 13 0 chr5 55648138 55648215 -143981935 + (TA)n Simple_repeat Simple_repeat 2 79 0 786 230 123 84 chr5 55648238 55649027 -143981123 - L2 LINE L2 0 3313 2485 326 292 102 15 chr5 55649144 55649281 -143980869 - MIR SINE MIR -12 250 102 488 307 6 6 chr5 55650697 55650853 -143979297 - MIR SINE MIR -70 138 34 1877 148 61 37 chr5 55650939 55651318 -143978832 - MLT1B LTR MaLR -2 388 1 22 70 0 0 chr5 55651359 55651402 -143978748 + AT_rich Low_complexity Low_complexity 1 43 0 1834 146 0 73 chr5 55651457 55651786 -143978364 - AluJb SINE Alu -7 305 1 259 262 12 24 chr5 55651998 55652082 -143978068 - L2 LINE L2 -173 3099 3017 180 0 0 0 chr5 55652457 55652477 -143977673 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2113 118 4 0 chr5 55652478 55652757 -143977393 - AluSx SINE Alu -32 280 1 243 298 53 26 chr5 55653024 55653138 -143977012 + L2 LINE L2 2936 3052 -261 379 279 184 11 chr5 55653355 55653534 -143976616 + MIR SINE MIR 34 243 -19 425 317 39 63 chr5 55653724 55654055 -143976095 - LTR67 LTR ERVL 0 557 235 2208 105 0 3 chr5 55654104 55654390 -143975760 + AluSp SINE Alu 1 285 -28 198 0 0 0 chr5 55654390 55654412 -143975738 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 255 291 0 25 chr5 55654433 55654512 -143975638 - LTR67 LTR ERVL -367 190 114 523 209 129 0 chr5 55655083 55655222 -143974928 - MER103 DNA DNA -2 164 8 399 190 190 35 chr5 55655429 55655579 -143974571 + MER5A DNA MER1_type 4 180 -9 239 313 51 40 chr5 55656198 55656374 -143973776 + MIR SINE MIR 47 224 -38 15148 114 29 41 chr5 55657261 55657664 -143972486 - Tigger1 DNA MER2_type 0 2418 2012 2200 128 0 0 chr5 55657664 55657960 -143972190 - AluSx SINE Alu -16 296 1 15148 114 29 41 chr5 55657960 55658957 -143971193 - Tigger1 DNA MER2_type -406 2012 1004 2529 77 0 0 chr5 55658957 55659267 -143970883 + AluY SINE Alu 1 310 -1 15148 114 29 41 chr5 55659267 55659431 -143970719 - Tigger1 DNA MER2_type -1414 1004 839 2018 139 0 10 chr5 55659431 55659734 -143970416 - AluSx SINE Alu -6 306 7 15148 114 29 41 chr5 55659734 55660615 -143969535 - Tigger1 DNA MER2_type -1579 839 1 377 194 84 52 chr5 55660848 55660979 -143969171 + MER5A DNA MER1_type 1 136 -53 280 273 8 66 chr5 55663334 55663455 -143966695 - L2 LINE L2 -5 3267 3154 556 234 19 40 chr5 55663513 55663688 -143966462 + MIR SINE MIR 37 206 -56 1977 101 4 0 chr5 55664270 55664527 -143965623 + AluSx SINE Alu 5 262 -50 211 300 91 27 chr5 55665661 55665771 -143964379 - MIR3 SINE MIR -14 194 78 204 135 0 0 chr5 55666268 55666305 -143963845 + (CA)n Simple_repeat Simple_repeat 1 37 0 773 262 111 83 chr5 55666931 55667258 -143962892 - LTR16C LTR ERVL -8 483 138 2319 110 0 3 chr5 55667258 55667567 -143962583 - AluSg SINE Alu -2 308 1 773 262 111 83 chr5 55667567 55667709 -143962441 - LTR16C LTR ERVL -353 138 1 201 389 40 16 chr5 55667760 55667886 -143962264 - L2 LINE L2 -8 3264 3136 732 244 70 14 chr5 55669941 55670154 -143959996 + MIR SINE MIR 37 261 -1 208 210 62 0 chr5 55670288 55670369 -143959781 + (TTTA)n Simple_repeat Simple_repeat 2 87 0 2618 131 9 16 chr5 55671810 55671861 -143958289 + L1MA2 LINE L1 4450 4500 -1646 2652 99 6 0 chr5 55671861 55672214 -143957936 - THE1A LTR MaLR 0 355 1 2618 131 9 16 chr5 55672214 55672604 -143957546 + L1MA2 LINE L1 4500 4888 -1258 3635 109 8 10 chr5 55672604 55673111 -143957039 + L1MA2 LINE L1 5783 6304 0 241 241 143 27 chr5 55673706 55673818 -143956332 + LTR16A1 LTR ERVL 333 457 0 293 256 161 0 chr5 55674843 55674980 -143955170 + LTR16A1 LTR ERVL 299 457 0 748 232 72 14 chr5 55676042 55676249 -143953901 + MIR SINE MIR 33 251 -11 462 237 44 85 chr5 55676598 55676799 -143953351 + MIR SINE MIR 20 209 -53 347 0 23 0 chr5 55678952 55678995 -143951155 + (CA)n Simple_repeat Simple_repeat 2 45 0 666 274 154 31 chr5 55679378 55679843 -143950307 + MLT1G1 LTR MaLR 1 489 -66 912 164 29 13 chr5 55679957 55680168 -143949982 - MER51A LTR ERV1 0 640 429 517 254 50 132 chr5 55680584 55680660 -143949490 - L2 LINE L2 -8 3264 3183 1551 203 0 16 chr5 55680660 55680965 -143949185 + AluJo SINE Alu 1 300 -12 517 254 50 132 chr5 55680965 55681168 -143948982 - L2 LINE L2 -89 3183 3008 1081 283 59 35 chr5 55681789 55682827 -143947323 - L1ME3 LINE L1 -216 5946 4878 367 283 112 83 chr5 55683173 55683512 -143946638 - HAL1b LINE L1 -619 729 381 240 286 85 46 chr5 55683626 55683909 -143946241 - HAL1 LINE L1 -1101 1406 1113 22 35 0 0 chr5 55684121 55684150 -143946000 + AT_rich Low_complexity Low_complexity 1 29 0 182 320 0 0 chr5 55685014 55685064 -143945086 + L3b LINE CR1 1175 1224 -359 247 341 49 0 chr5 55685244 55685367 -143944783 - MIR SINE MIR 0 262 134 631 286 143 54 chr5 55685370 55685796 -143944354 - L2 LINE L2 0 3313 2850 1751 139 0 4 chr5 55685925 55686177 -143943973 - AluSx SINE Alu -61 251 1 216 250 0 17 chr5 55686256 55686316 -143943834 - L2 LINE L2 -604 2710 2652 567 29 0 0 chr5 55686597 55686666 -143943484 + (CA)n Simple_repeat Simple_repeat 2 70 0 22 0 0 0 chr5 55687342 55687364 -143942786 + AT_rich Low_complexity Low_complexity 1 22 0 397 204 70 102 chr5 55687950 55688136 -143942014 - L1ME4a LINE L1 -3 6118 5939 6401 86 43 22 chr5 55688160 55689748 -143940402 - L1PA14 LINE L1 -4 6157 4603 2208 125 21 56 chr5 55689748 55690125 -143940025 + THE1B LTR MaLR 1 364 0 12827 84 4 4 chr5 55690125 55691704 -143938446 + THE1B-int LTR MaLR 1 1580 0 2156 130 21 56 chr5 55691704 55692081 -143938069 + THE1B LTR MaLR 1 364 0 6401 86 43 22 chr5 55692081 55692213 -143937937 - L1PA14 LINE L1 -1557 4604 4400 1674 49 5 0 chr5 55692213 55692417 -143937733 - L1P3 LINE L1 -341 5813 5609 * 1975 241 2 12 chr5 55692413 55692932 -143937218 - L1P LINE L1 -2957 3189 2676 312 232 238 6 chr5 55692912 55693080 -143937070 - L1ME4a LINE L1 -202 5919 5713 * 302 195 24 85 chr5 55693201 55693283 -143936867 - L2 LINE L2 -605 2709 2633 210 261 92 0 chr5 55693823 55693888 -143936262 + MER91C DNA MER1_type 36 106 -34 2039 265 54 60 chr5 55694094 55695558 -143934592 + L1MCc LINE L1 859 2522 -4600 29 0 0 25 chr5 55695592 55695614 -143934536 + AT_rich Low_complexity Low_complexity 1 23 -16 2158 89 11 0 chr5 55695614 55695894 -143934256 - AluSc SINE Alu -26 283 1 29 0 0 25 chr5 55695894 55695911 -143934239 + AT_rich Low_complexity Low_complexity 23 39 0 963 280 89 52 chr5 55695925 55696364 -143933786 + LTR16A1 LTR ERVL 3 457 0 523 258 94 41 chr5 55696371 55696615 -143933535 - L1M4 LINE L1 -2098 4048 3792 841 199 86 0 chr5 55697351 55697502 -143932648 - FRAM SINE Alu -12 164 1 2870 10 0 0 chr5 55697956 55698267 -143931883 - AluY SINE Alu 0 311 1 198 300 29 29 chr5 55698747 55698817 -143931333 - MIR3 SINE MIR -3 205 136 224 318 112 47 chr5 55701266 55701480 -143928670 + L2 LINE L2 3084 3311 -2 1947 145 43 38 chr5 55701996 55702369 -143927781 + THE1C LTR MaLR 1 375 0 182 247 210 0 chr5 55702575 55702656 -143927494 + MIR3 SINE MIR 84 181 -27 1265 237 56 30 chr5 55703142 55703538 -143926612 + MLT1J1 LTR MaLR 41 446 0 26 50 0 0 chr5 55704339 55704379 -143925771 + AT_rich Low_complexity Low_complexity 1 40 0 354 165 174 87 chr5 55704874 55704969 -143925181 + MIR SINE MIR 34 142 -120 1661 165 26 26 chr5 55704969 55705278 -143924872 + AluJo SINE Alu 1 309 -3 354 165 174 87 chr5 55705278 55705297 -143924853 + MIR SINE MIR 142 158 -104 228 222 0 0 chr5 55705291 55705336 -143924814 + L2 LINE L2 3257 3301 -12 * 308 340 0 0 chr5 55705346 55705443 -143924707 + 5S rRNA rRNA 7 103 -18 2347 97 3 0 chr5 55705743 55706042 -143924108 + AluSp SINE Alu 1 300 -13 293 256 311 13 chr5 55708016 55708192 -143921958 + MIR SINE MIR 21 243 -19 1285 21 0 0 chr5 55708360 55708503 -143921647 - AluY SINE Alu -13 298 156 23 33 0 0 chr5 55709784 55709814 -143920336 + AT_rich Low_complexity Low_complexity 1 30 0 330 288 199 7 chr5 55709937 55710083 -143920067 - MIR SINE MIR -8 254 81 252 0 0 0 chr5 55710211 55710239 -143919911 + (CA)n Simple_repeat Simple_repeat 1 28 0 3087 235 18 13 chr5 55710542 55711215 -143918935 + MER63C DNA MER1_type 253 928 -2 3164 153 31 21 chr5 55712890 55713405 -143916745 + MLT2B1 LTR ERVL 1 520 0 1046 126 6 33 chr5 55714351 55714533 -143915617 + L1MC1 LINE L1 5909 6085 -248 1025 193 232 14 chr5 55714533 55714818 -143915332 + MER47A DNA MER2_type 20 366 0 1471 109 5 0 chr5 55714818 55715020 -143915130 + L1MC1 LINE L1 6082 6284 -49 186 43 0 0 chr5 55715340 55715363 -143914787 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 264 281 31 10 chr5 55716076 55716172 -143913978 + L2 LINE L2 2688 2785 -529 426 328 0 30 chr5 55716523 55716654 -143913496 + MIR SINE MIR 21 147 -115 286 291 123 23 chr5 55716773 55716993 -143913157 + L2 LINE L2 2688 2929 -385 202 272 266 72 chr5 55717176 55717665 -143912485 - L3 LINE CR1 -129 1448 865 191 353 15 15 chr5 55717680 55717748 -143912402 - MIR SINE MIR -110 98 31 356 224 163 54 chr5 55717811 55717958 -143912192 - MIR SINE MIR 0 262 100 447 322 8 0 chr5 55719344 55719462 -143910688 - L2 LINE L2 0 3272 3154 1731 219 72 52 chr5 55719495 55720033 -143910117 - MER74B LTR ERVL -18 604 56 285 246 30 82 chr5 55720034 55720168 -143909982 - LTR33A LTR ERVL 0 523 397 858 255 118 71 chr5 55721095 55721546 -143908604 - MLT1K LTR MaLR -1 475 4 2364 77 0 7 chr5 55722691 55722988 -143907162 + AluSq SINE Alu 1 295 -18 1094 318 93 53 chr5 55723502 55724349 -143905801 - L3 LINE CR1 -75 1502 622 249 241 76 0 chr5 55726338 55726417 -143903733 + L1ME4a LINE L1 5838 5922 -199 31 0 0 0 chr5 55726507 55726538 -143903612 + AT_rich Low_complexity Low_complexity 1 31 0 6359 111 30 13 chr5 55726538 55728124 -143902026 - L1PA16 LINE L1 -9 6157 4552 821 302 98 8 chr5 55728432 55728810 -143901340 - LTR33 LTR ERVL -51 470 59 54 62 0 0 chr5 55729392 55729488 -143900662 + AT_rich Low_complexity Low_complexity 1 96 0 1181 108 0 0 chr5 55729543 55729701 -143900449 - L1PB1 LINE L1 -1 6150 5993 328 186 0 0 chr5 55729701 55729760 -143900390 - L1 LINE L1 -1385 4761 4703 23 0 0 0 chr5 55729760 55729783 -143900367 + AT_rich Low_complexity Low_complexity 1 23 0 209 235 41 10 chr5 55729786 55729884 -143900266 + (TTATA)n Simple_repeat Simple_repeat 3 103 0 620 200 5 97 chr5 55729993 55730188 -143899962 + MER96B DNA MER1_type? 241 417 0 304 270 34 11 chr5 55730527 55730616 -143899534 - MIR3 SINE MIR -1 207 117 342 267 176 8 chr5 55732249 55732380 -143897770 + MIR3 SINE MIR 33 185 -23 320 301 39 39 chr5 55732472 55732678 -143897472 + L1MB1 LINE L1 5793 5998 -170 * 1088 227 17 48 chr5 55732506 55732801 -143897349 + L1ME2 LINE L1 5834 6119 -45 299 300 50 0 chr5 55732807 55732927 -143897223 + L1MC4 LINE L1 7916 8041 -1 427 118 0 15 chr5 55733305 55733373 -143896777 + MSTC LTR MaLR 307 373 -55 216 0 0 0 chr5 55733868 55733892 -143896258 + (TG)n Simple_repeat Simple_repeat 1 24 0 224 281 16 16 chr5 55734037 55734101 -143896049 - MIR3 SINE MIR -32 176 113 384 296 9 9 chr5 55734167 55734282 -143895868 - MIR3 SINE MIR -23 185 71 2020 114 22 0 chr5 55734496 55734769 -143895381 - AluSx SINE Alu -33 279 1 1956 233 119 81 chr5 55735033 55735803 -143894347 - L2 LINE L2 -25 3288 2549 2511 114 57 47 chr5 55735803 55735992 -143894158 + MSTA LTR MaLR 1 187 -241 2308 86 10 0 chr5 55735992 55736284 -143893866 + AluSp SINE Alu 1 295 -18 2511 114 57 47 chr5 55736284 55736516 -143893634 + MSTA LTR MaLR 187 426 -2 1956 233 119 81 chr5 55736516 55736796 -143893354 - L2 LINE L2 -764 2549 2281 247 97 0 0 chr5 55736796 55736827 -143893323 - MSTB LTR MaLR -70 356 326 1956 233 119 81 chr5 55736827 55737028 -143893122 - L2 LINE L2 -1032 2281 1958 2259 95 0 17 chr5 55737140 55737436 -143892714 + AluSq SINE Alu 1 291 -22 545 261 64 0 chr5 55737505 55737662 -143892488 + MER117 DNA MER1_type 22 188 -9 362 251 101 27 chr5 55737664 55737864 -143892286 - MIR SINE MIR -39 223 6 21 0 0 0 chr5 55740528 55740549 -143889601 + AT_rich Low_complexity Low_complexity 1 21 0 1093 289 56 5 chr5 55740884 55741267 -143888883 + L1ME3A LINE L1 5542 5956 -214 260 298 106 19 chr5 55743782 55743886 -143886264 + L2 LINE L2 3136 3248 -24 182 73 171 0 chr5 55745013 55745054 -143885096 - L3b LINE CR1 0 1583 1536 437 300 13 67 chr5 55745550 55745594 -143884556 - MIR SINE MIR -119 143 98 2112 176 20 6 chr5 55745594 55745952 -143884198 + MLT1A1 LTR MaLR 1 363 -2 437 300 13 67 chr5 55745952 55746057 -143884093 - MIR SINE MIR -164 98 2 200 271 73 86 chr5 55746091 55746242 -143883908 + L2 LINE L2 2789 2937 -377 476 229 102 24 chr5 55746402 55746568 -143883582 + LTR16C LTR ERVL 313 491 0 2502 170 62 2 chr5 55747317 55747769 -143882381 - L1MB2 LINE L1 -3 6168 5690 822 221 34 29 chr5 55748086 55748294 -143881856 + MIR SINE MIR 46 254 -8 195 200 167 0 chr5 55748308 55748368 -143881782 - MIR3 SINE MIR -39 169 100 880 187 7 7 chr5 55749190 55749368 -143880782 - FRAM SINE Alu 0 178 1 1239 214 86 44 chr5 55749513 55749919 -143880231 + MER74B LTR ERVL 125 547 -75 262 204 97 21 chr5 55749839 55749932 -143880218 - MER88 LTR ERVL -286 178 79 * 318 313 0 106 chr5 55750040 55750238 -143879912 + MER5B DNA MER1_type 2 178 0 552 236 130 19 chr5 55750858 55751066 -143879084 + MIR SINE MIR 21 251 -11 231 36 0 0 chr5 55752081 55752109 -143878041 + (CTG)n Simple_repeat Simple_repeat 2 29 0 338 289 161 50 chr5 55752504 55752684 -143877466 - MIR3 SINE MIR -3 205 6 508 273 87 0 chr5 55753153 55753325 -143876825 - MIR SINE MIR -50 212 26 180 26 26 51 chr5 55755156 55755195 -143874955 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 1673 135 67 11 chr5 55755413 55755717 -143874433 + AluJo SINE Alu 1 319 0 388 221 58 105 chr5 55756409 55756599 -143873551 + MER113 DNA MER1_type? 30 210 -311 2272 41 44 0 chr5 55756808 55757110 -143873040 + AluY SINE Alu 1 314 0 496 290 5 78 chr5 55757394 55757587 -143872563 - MLT1J LTR MaLR -97 414 236 451 272 121 25 chr5 55757720 55757931 -143872219 - MLT1F LTR MaLR -362 231 1 237 296 64 56 chr5 55758051 55758158 -143871992 + Tigger8 DNA MER2_type 115 225 -441 595 77 13 0 chr5 55758158 55758236 -143871914 - MADE1 DNA Mariner -1 79 1 237 296 64 56 chr5 55758236 55758253 -143871897 + Tigger8 DNA MER2_type 225 240 -426 714 264 76 49 chr5 55758414 55758782 -143871368 + Tigger8 DNA MER2_type 227 604 -62 372 250 86 46 chr5 55758895 55759047 -143871103 + Charlie8 DNA MER1_type 19 176 -2241 996 138 26 62 chr5 55759181 55759244 -143870906 - MER5A DNA MER1_type 0 189 125 2099 112 0 56 chr5 55759244 55759567 -143870583 + AluSx SINE Alu 1 305 -7 996 138 26 62 chr5 55759567 55759698 -143870452 - MER5A DNA MER1_type -64 125 2 414 294 88 26 chr5 55759787 55759981 -143870169 + MIR SINE MIR 57 262 0 235 287 25 96 chr5 55759979 55760136 -143870014 + L2 LINE L2 3168 3313 0 * 814 286 88 47 chr5 55760424 55760889 -143869261 - MLT1J LTR MaLR -2 509 26 321 26 0 0 chr5 55760921 55760959 -143869191 + (CA)n Simple_repeat Simple_repeat 1 38 0 404 230 32 63 chr5 55762549 55762675 -143867475 - L2 LINE L2 0 3272 3151 445 278 88 82 chr5 55763230 55763618 -143866532 + Charlie8 DNA MER1_type 37 426 -1991 785 219 57 79 chr5 55763632 55763947 -143866203 - L2 LINE L2 -1 3312 3005 363 232 98 9 chr5 55763964 55764076 -143866074 + Charlie8 DNA MER1_type 433 554 -1863 251 306 50 62 chr5 55764213 55764373 -143865777 - MIR SINE MIR -67 195 38 310 357 39 34 chr5 55765835 55766216 -143863934 + L2 LINE L2 2557 2939 -375 426 243 52 69 chr5 55766852 55766987 -143863163 - MIR SINE MIR 0 262 129 1724 260 88 7 chr5 55766987 55767441 -143862709 + LTR16C LTR ERVL 1 491 0 426 243 52 69 chr5 55767441 55767478 -143862672 - MIR SINE MIR -133 129 93 2099 138 0 0 chr5 55768357 55768647 -143861503 + AluSx SINE Alu 1 290 -22 280 341 12 12 chr5 55768710 55768795 -143861355 - MIR3 SINE MIR -115 93 9 2254 95 0 0 chr5 55769161 55769478 -143860672 - AluY SINE Alu 0 317 1 13422 195 18 9 chr5 55769849 55770373 -143859777 + L1PA16 LINE L1 2225 2743 -3423 2825 7 0 0 chr5 55770373 55770673 -143859477 + AluYb8 SINE Alu 16 315 -3 13422 195 18 9 chr5 55770673 55774045 -143856105 + L1PA16 LINE L1 2743 6157 -9 2204 127 0 0 chr5 55774197 55774504 -143855646 + AluSx SINE Alu 1 307 -5 750 315 40 4 chr5 55774920 55775018 -143855132 - MIR SINE MIR 0 262 169 186 43 0 0 chr5 55775018 55775041 -143855109 + (ATG)n Simple_repeat Simple_repeat 2 24 0 750 315 40 4 chr5 55775041 55775193 -143854957 - MIR SINE MIR -93 169 3 2254 98 0 0 chr5 55776747 55777032 -143853118 + AluSx SINE Alu 21 305 -7 2577 55 13 0 chr5 55777386 55777693 -143852457 + AluSp SINE Alu 1 311 -2 210 306 0 0 chr5 55777774 55777836 -143852314 + A-rich Low_complexity Low_complexity 2 63 0 2343 92 0 0 chr5 55778383 55778678 -143851472 - AluSc SINE Alu -14 295 1 495 199 68 133 chr5 55780090 55780297 -143849853 - L1ME4a LINE L1 0 6121 5945 369 0 0 0 chr5 55780297 55780338 -143849812 + (TA)n Simple_repeat Simple_repeat 2 42 0 495 199 68 133 chr5 55780338 55780482 -143849668 - L1ME4a LINE L1 -176 5945 5793 2168 109 3 3 chr5 55783708 55784010 -143846140 - AluSc SINE Alu -7 302 1 427 293 76 36 chr5 55784308 55784533 -143845617 - L1MEd LINE L1 -5555 564 331 23 78 0 0 chr5 55784871 55784922 -143845228 + AT_rich Low_complexity Low_complexity 1 51 0 3389 71 32 27 chr5 55785873 55786207 -143843943 - L1P3 LINE L1 -430 5724 5393 2707 69 3 0 chr5 55786207 55786539 -143843611 - L1PA6 LINE L1 0 6154 5822 3389 71 32 27 chr5 55786539 55786940 -143843210 - L1P3 LINE L1 -761 5393 4996 3031 42 0 0 chr5 55786958 55787313 -143842837 + L1PA7 LINE L1 5767 6121 -33 47 61 0 0 chr5 55787510 55787592 -143842558 + AT_rich Low_complexity Low_complexity 1 82 0 392 191 34 0 chr5 55788777 55788866 -143841284 - MIR SINE MIR -54 208 117 745 285 101 17 chr5 55788881 55789169 -143840981 + L2 LINE L2 3002 3313 0 191 314 70 47 chr5 55789159 55789245 -143840905 - MIR SINE MIR -146 116 29 * 1959 197 25 6 chr5 55789275 55789631 -143840519 - MLT1A1 LTR MaLR -1 364 2 212 408 0 10 chr5 55789778 55789881 -143840269 + MIR SINE MIR 42 143 -65 31 44 0 0 chr5 55789970 55790015 -143840135 + AT_rich Low_complexity Low_complexity 1 45 0 198 0 0 0 chr5 55791024 55791046 -143839104 + (A)n Simple_repeat Simple_repeat 1 22 0 535 253 11 81 chr5 55792909 55792975 -143837175 - MER5B DNA MER1_type 0 178 109 7636 50 4 7 chr5 55792975 55793961 -143836189 + L1PA6 LINE L1 5171 6154 0 535 253 11 81 chr5 55793961 55794079 -143836071 - MER5B DNA MER1_type -69 109 7 293 271 221 0 chr5 55794079 55794219 -143835931 - MER5A DNA MER1_type 0 189 19 212 293 17 0 chr5 55795220 55795278 -143834872 + L2 LINE L2 3242 3300 -13 23 0 0 0 chr5 55797184 55797207 -143832943 + AT_rich Low_complexity Low_complexity 1 23 0 582 296 114 11 chr5 55798955 55799131 -143831019 - MER91A DNA MER1_type 0 196 3 466 335 17 25 chr5 55800120 55800313 -143829837 - MIR SINE MIR -71 191 5 3641 155 17 37 chr5 55800594 55800964 -143829186 - L1PA16 LINE L1 -16 6150 5797 2179 116 10 0 chr5 55800964 55801267 -143828883 - AluSx SINE Alu -6 306 1 3641 155 17 37 chr5 55801267 55801541 -143828609 - L1PA16 LINE L1 -369 5797 5519 24 53 0 0 chr5 55801954 55801992 -143828158 + AT_rich Low_complexity Low_complexity 1 38 0 368 273 52 11 chr5 55802345 55802471 -143827679 + L1MC/D LINE L1 5612 5743 -453 4245 181 39 32 chr5 55802546 55802653 -143827497 + L1MB4 LINE L1 5184 5289 -891 294 29 0 0 chr5 55802653 55802688 -143827462 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 4245 181 39 32 chr5 55802688 55803461 -143826689 + L1MB4 LINE L1 5289 6076 -104 2255 123 0 0 chr5 55803461 55803762 -143826388 + AluSx SINE Alu 1 301 -11 4245 181 39 32 chr5 55803762 55803867 -143826283 + L1MB4 LINE L1 6076 6179 -1 272 256 128 0 chr5 55804178 55804264 -143825886 - MER5A DNA MER1_type -88 101 5 213 39 0 0 chr5 55804651 55804677 -143825473 + (TCCCC)n Simple_repeat Simple_repeat 1 26 0 353 109 16 0 chr5 55804678 55804742 -143825408 + (TTC)n Simple_repeat Simple_repeat 3 67 0 6426 57 3 7 chr5 55805258 55806027 -143824123 + L1PA7 LINE L1 5381 6146 -8 567 258 158 23 chr5 55806129 55806350 -143823800 - MIR SINE MIR -4 258 8 2718 206 132 56 chr5 55807280 55808212 -143821938 - Charlie1 DNA MER1_type -455 2306 1 223 244 0 0 chr5 55809206 55809251 -143820899 - MIR SINE MIR -119 143 99 228 323 47 39 chr5 55810408 55810535 -143819615 - L2 LINE L2 -10 3303 3176 219 234 242 0 chr5 55810555 55810683 -143819467 - MIR SINE MIR -15 247 89 1801 284 74 15 chr5 55811199 55811797 -143818353 + HERV16 LTR ERVL 814 1446 -3550 525 285 15 0 chr5 55811941 55812078 -143818072 + HERV16 LTR ERVL 1686 1824 -3172 * 752 318 16 43 chr5 55812062 55812306 -143817844 + HERV16 LTR ERVL 2933 3169 -2485 1513 182 33 97 chr5 55812306 55812696 -143817454 - MLT1A1 LTR MaLR 0 365 1 752 318 16 43 chr5 55812696 55812756 -143817394 + HERV16 LTR ERVL 3169 3229 -2425 219 288 17 0 chr5 55813144 55813203 -143816947 - MIR3 SINE MIR 0 208 149 512 287 148 21 chr5 55813275 55813613 -143816537 + MLT1L LTR MaLR 220 600 -15 353 344 55 16 chr5 55813620 55813748 -143816402 - MIR3 SINE MIR -39 169 37 204 191 0 24 chr5 55814282 55814324 -143815826 + MIR SINE MIR 21 61 -147 474 239 17 111 chr5 55814332 55814506 -143815644 + LTR67 LTR ERVL 6 162 -395 2168 217 91 15 chr5 55814506 55814926 -143815224 + MLT2B1 LTR ERVL 1 462 -58 192 77 0 0 chr5 55814926 55814952 -143815198 + (TG)n Simple_repeat Simple_repeat 1 26 0 2168 217 91 15 chr5 55814952 55815005 -143815145 + MLT2B1 LTR ERVL 462 510 -10 420 296 24 0 chr5 55815252 55815377 -143814773 + L2 LINE L2 3185 3312 -1 4467 32 0 0 chr5 55815524 55816023 -143814127 + L1PA4 LINE L1 5657 6155 0 1082 214 34 0 chr5 55816632 55816870 -143813280 - MIR SINE MIR 0 262 17 2184 87 0 7 chr5 55817027 55817316 -143812834 - L1PA13 LINE L1 -465 5698 5412 2915 99 79 24 chr5 55817332 55817769 -143812381 + L1PA13 LINE L1 5683 6161 -2 255 157 157 22 chr5 55817778 55817867 -143812283 - L1ME4a LINE L1 -2 6119 6019 1921 138 6 28 chr5 55818098 55818418 -143811732 + L1MC1 LINE L1 6019 6331 -2 678 289 28 16 chr5 55818470 55818715 -143811435 - MIR SINE MIR -19 243 5 2390 80 0 3 chr5 55819564 55819876 -143810274 + AluY SINE Alu 1 311 0 592 234 288 29 chr5 55819927 55820337 -143809813 + MLT1H1 LTR MaLR 32 547 -8 415 302 71 42 chr5 55820340 55820537 -143809613 + L1ME4a LINE L1 5605 5816 -305 2304 70 11 3 chr5 55820537 55820821 -143809329 + AluSp SINE Alu 1 286 -27 415 302 71 42 chr5 55820821 55820931 -143809219 + L1ME4a LINE L1 5816 5921 -200 386 197 58 66 chr5 55821068 55821205 -143808945 - L1ME4a LINE L1 0 6121 5986 512 262 115 11 chr5 55821625 55821816 -143808334 + MIR SINE MIR 8 218 -44 545 262 35 21 chr5 55822265 55822410 -143807740 - MIR SINE MIR -100 162 16 217 255 122 51 chr5 55822562 55822660 -143807490 - MER5B DNA MER1_type -18 160 56 1990 146 3 0 chr5 55824983 55825284 -143804866 + AluSx SINE Alu 3 304 -8 1879 125 89 0 chr5 55826587 55826868 -143803282 + AluSg SINE Alu 1 306 -4 2431 86 0 3 chr5 55827003 55827307 -143802843 - AluSg SINE Alu -7 303 1 1438 236 142 43 chr5 55827800 55828019 -143802131 - L1ME3A LINE L1 -4 6166 5970 1374 161 29 29 chr5 55828019 55828051 -143802099 - L1MB3 LINE L1 -8 6175 6144 2098 108 14 0 chr5 55828051 55828338 -143801812 - AluSc SINE Alu -18 291 1 1374 161 29 29 chr5 55828338 55828584 -143801566 - L1MB3 LINE L1 -38 6145 5897 1438 236 142 43 chr5 55828584 55828894 -143801256 - L1ME3A LINE L1 -200 5970 5585 283 234 122 43 chr5 55830185 55830320 -143799830 - MLT1J LTR MaLR 0 511 458 1236 236 126 3 chr5 55830320 55830621 -143799529 + MER58B DNA MER1_type 4 341 0 283 234 122 43 chr5 55830621 55830659 -143799491 - MLT1J LTR MaLR -53 458 424 1015 214 11 6 chr5 55835271 55835453 -143794697 - MER5A DNA MER1_type -5 184 2 1909 121 0 0 chr5 55835962 55836219 -143793931 + AluSg SINE Alu 35 291 -19 311 184 112 41 chr5 55836369 55836467 -143793683 - MIR SINE MIR -86 176 72 22 0 0 0 chr5 55837639 55837661 -143792489 + AT_rich Low_complexity Low_complexity 1 22 0 245 212 15 15 chr5 55837705 55837771 -143792379 + (CATATA)n Simple_repeat Simple_repeat 5 70 0 2170 79 4 7 chr5 55837812 55838092 -143792058 + AluY SINE Alu 1 279 -32 41526 65 8 5 chr5 55838260 55844391 -143785759 - L1PA5 LINE L1 -5 6149 2 789 299 12 29 chr5 55844392 55844633 -143785517 - MIR SINE MIR -4 258 22 305 412 46 13 chr5 55844738 55844891 -143785259 + L2 LINE L2 3111 3268 -4 672 120 0 74 chr5 55845652 55845760 -143784390 + AluJb SINE Alu 196 295 -17 252 282 70 0 chr5 55846284 55846355 -143783795 + MER5A DNA MER1_type 19 94 -95 * 491 259 184 0 chr5 55846345 55846492 -143783658 - MER5A DNA MER1_type -7 182 9 1973 125 4 4 chr5 55846961 55847284 -143782866 - AluSg SINE Alu 0 323 1 198 196 71 54 chr5 55847315 55847371 -143782779 + MIR SINE MIR 88 144 -118 962 180 21 37 chr5 55847435 55847624 -143782526 + MER5A DNA MER1_type 4 189 0 2193 123 0 0 chr5 55847807 55848109 -143782041 + AluSx SINE Alu 1 302 -10 22 0 0 0 chr5 55848110 55848132 -143782018 + AT_rich Low_complexity Low_complexity 1 22 0 349 233 143 48 chr5 55848250 55848460 -143781690 + L1ME1 LINE L1 5254 5483 -2325 328 298 88 39 chr5 55848499 55848784 -143781366 + L1ME1 LINE L1 5565 5863 -303 523 130 20 50 chr5 55851113 55851213 -143778937 + AluJo SINE Alu 40 136 -176 492 317 40 5 chr5 55851431 55851633 -143778517 - L2 LINE L2 0 3313 3105 207 170 0 0 chr5 55852337 55852384 -143777766 + A-rich Low_complexity Low_complexity 1 47 0 233 283 0 0 chr5 55852742 55852795 -143777355 + L2 LINE L2 3220 3272 0 1222 97 0 0 chr5 55852866 55853020 -143777130 - AluSx SINE Alu -158 154 1 1094 159 6 11 chr5 55853020 55853202 -143776948 - MER20 DNA MER1_type -38 181 1 3820 27 23 5 chr5 55853765 55854205 -143775945 + LTR7 LTR ERV1 1 448 -2 313 275 132 93 chr5 55854728 55855106 -143775044 + L1M2 LINE L1 630 1022 -5827 2754 174 62 35 chr5 55855973 55856509 -143773641 + MER44D DNA MER2_type 1 605 0 2224 109 3 0 chr5 55856699 55857001 -143773149 - AluSp SINE Alu -10 303 1 921 226 155 4 chr5 55857108 55857360 -143772790 - MLT1A1 LTR MaLR -4 361 72 2762 81 3 24 chr5 55857365 55857712 -143772438 - L1PB1 LINE L1 -12 6139 5799 216 0 0 0 chr5 55857712 55857736 -143772414 + (TG)n Simple_repeat Simple_repeat 2 25 0 2762 81 3 24 chr5 55857736 55857759 -143772391 - L1PB1 LINE L1 -352 5799 5777 188 224 0 17 chr5 55857762 55857820 -143772330 + (TA)n Simple_repeat Simple_repeat 1 57 0 2290 70 44 16 chr5 55857848 55858163 -143771987 - L1PB1 LINE L1 -360 5791 5468 408 95 176 27 chr5 55858163 55858237 -143771913 - MLT1A1 LTR MaLR -343 85 1 2238 123 0 0 chr5 55858592 55858894 -143771256 + AluSx SINE Alu 1 302 -10 2118 139 0 0 chr5 55859909 55860210 -143769940 + AluSx SINE Alu 1 301 -11 1771 103 16 4 chr5 55860900 55861143 -143769007 - AluSg SINE Alu -11 299 54 2142 108 0 0 chr5 55862458 55862762 -143767388 + AluSc SINE Alu 1 304 0 670 292 65 9 chr5 55862984 55863200 -143766950 + MIR SINE MIR 10 237 -25 246 221 74 90 chr5 55863436 55863558 -143766592 - MIR SINE MIR -56 206 87 29 28 0 0 chr5 55864990 55865026 -143765124 + AT_rich Low_complexity Low_complexity 1 36 0 1499 195 3 29 chr5 55866140 55866453 -143763697 + AluJb SINE Alu 1 305 -7 480 127 0 0 chr5 55866963 55867026 -143763124 - AluS SINE Alu -239 73 11 1486 118 0 27 chr5 55867028 55867248 -143762902 + AluSg/x SINE Alu 88 301 -11 2062 125 0 0 chr5 55867673 55867985 -143762165 + AluSx SINE Alu 1 312 0 2826 169 34 21 chr5 55868052 55868578 -143761572 - MER6A DNA MER2_type -71 534 2 180 0 0 0 chr5 55869205 55869225 -143760925 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 337 296 112 41 chr5 55870367 55870536 -143759614 + L2 LINE L2 3087 3267 -5 290 286 143 9 chr5 55872151 55872256 -143757894 + L2 LINE L2 3192 3310 -3 401 241 5 59 chr5 55872747 55872934 -143757216 + CT-rich Low_complexity Low_complexity 4 180 0 327 247 113 0 chr5 55873571 55873668 -143756482 - MIR3 SINE MIR -19 189 82 232 281 67 82 chr5 55873979 55874075 -143756075 - MIR SINE MIR -55 153 58 2283 98 0 3 chr5 55874075 55874372 -143755778 - AluSx SINE Alu -15 297 2 232 281 67 82 chr5 55874372 55874410 -143755740 - MIR SINE MIR -150 58 21 35 41 0 0 chr5 55875939 55875988 -143754162 + AT_rich Low_complexity Low_complexity 1 49 0 2305 107 0 16 chr5 55876643 55876953 -143753197 + AluSq SINE Alu 1 305 -8 31 0 0 0 chr5 55876997 55877028 -143753122 + AT_rich Low_complexity Low_complexity 1 31 0 207 300 0 0 chr5 55878009 55878069 -143752081 + (TA)n Simple_repeat Simple_repeat 1 60 0 388 247 0 0 chr5 55878382 55878459 -143751691 - L2 LINE L2 0 3313 3237 460 302 199 58 chr5 55878607 55879434 -143750716 - L2 LINE L2 -337 2977 2034 2133 110 3 17 chr5 55879634 55879935 -143750215 + AluSx SINE Alu 3 299 -13 274 223 87 78 chr5 55880068 55880171 -143749979 - L2 LINE L2 0 3313 3210 621 190 107 25 chr5 55880274 55880395 -143749755 + FLAM_A SINE Alu 1 131 -2 376 274 128 17 chr5 55881612 55881791 -143748359 + MIR SINE MIR 8 206 -56 21 0 0 0 chr5 55883432 55883453 -143746697 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr5 55885526 55885565 -143744585 + GC_rich Low_complexity Low_complexity 1 39 0 343 275 127 99 chr5 55885869 55886414 -143743736 + L1M2 LINE L1 840 1399 -5450 318 272 155 42 chr5 55886492 55886664 -143743486 - L1M2 LINE L1 -5716 1133 982 195 100 0 0 chr5 55886664 55886694 -143743456 + (CGGGGG)n Simple_repeat Simple_repeat 2 31 0 318 272 155 42 chr5 55886694 55886782 -143743368 - L1M2 LINE L1 -5867 982 633 200 246 31 46 chr5 55889123 55889188 -143740962 - L2 LINE L2 -6 3307 3244 22 70 0 0 chr5 55889815 55889858 -143740292 + AT_rich Low_complexity Low_complexity 1 43 0 1660 184 3 13 chr5 55891098 55891407 -143738743 + AluJo SINE Alu 1 306 -6 1232 172 109 40 chr5 55891434 55891736 -143738414 - MER33 DNA MER1_type -1 323 1 2240 127 47 26 chr5 55891871 55892211 -143737939 + MER7A DNA MER2_type 2 346 0 328 297 108 18 chr5 55892383 55892494 -143737656 - L2 LINE L2 -1 3271 3151 225 213 43 0 chr5 55892512 55892559 -143737591 + L1M2b LINE L1 410 458 -6751 1464 190 131 8 chr5 55892689 55893062 -143737088 - Zaphod DNA AcHobo -4 4027 3609 889 224 68 23 chr5 55893080 55893388 -143736762 - Zaphod DNA AcHobo -3180 851 530 911 283 133 11 chr5 55893407 55893760 -143736390 - Zaphod DNA AcHobo -3635 396 1 199 299 10 62 chr5 55893761 55893858 -143736292 - L2 LINE L2 -25 3288 3197 232 314 99 25 chr5 55893885 55894006 -143736144 + L2 LINE L2 3123 3252 -20 969 253 46 0 chr5 55894620 55894861 -143735289 - MIR SINE MIR -10 252 1 361 234 72 14 chr5 55895244 55895403 -143734747 + MLT1J1 LTR MaLR 1 135 -311 305 251 147 31 chr5 55895454 55895617 -143734533 + MLT1J1 LTR MaLR 265 446 0 240 216 113 44 chr5 55895672 55895764 -143734386 + MIR SINE MIR 15 102 -106 1014 265 152 21 chr5 55895795 55895985 -143734165 + LTR16C LTR ERVL 1 165 -326 971 215 39 24 chr5 55895985 55896190 -143733960 - MER63A DNA MER1_type 0 210 3 1014 265 152 21 chr5 55896190 55896433 -143733717 + LTR16C LTR ERVL 165 491 0 21 36 0 0 chr5 55896649 55896677 -143733473 + AT_rich Low_complexity Low_complexity 1 28 0 1799 130 83 14 chr5 55896846 55897122 -143733028 - AluSx SINE Alu -17 295 1 343 296 90 58 chr5 55897466 55897655 -143732495 + MIR3 SINE MIR 3 197 -11 309 313 104 26 chr5 55900191 55900383 -143729767 - MIR SINE MIR -6 256 50 233 333 21 10 chr5 55900463 55900559 -143729591 - L2 LINE L2 -6 3307 3211 5883 30 0 1 chr5 55901737 55902428 -143727722 - L1P LINE L1 -2054 4092 3403 501 215 62 97 chr5 55902900 55903095 -143727055 - MER112 DNA MER1_type -72 188 1 582 283 22 66 chr5 55904073 55904437 -143725713 - HAL1 LINE L1 -30 2477 2130 213 271 21 29 chr5 55905804 55905930 -143724220 + (TA)n Simple_repeat Simple_repeat 1 127 -12 2037 140 0 0 chr5 55905930 55906223 -143723927 - AluSx SINE Alu -19 293 1 213 271 21 29 chr5 55906223 55906236 -143723914 + (TA)n Simple_repeat Simple_repeat 127 139 0 21 57 0 0 chr5 55906639 55906674 -143723476 + AT_rich Low_complexity Low_complexity 1 35 0 676 173 58 32 chr5 55906677 55906833 -143723317 + L1MB7 LINE L1 4679 4838 -1308 * 4383 165 47 54 chr5 55906827 55907788 -143722362 + L1MB7 LINE L1 5091 6057 -127 2724 22 0 10 chr5 55907788 55908100 -143722050 - AluY SINE Alu -2 309 1 4383 165 47 54 chr5 55908100 55908144 -143722006 + L1MB7 LINE L1 6057 6100 -84 186 43 0 0 chr5 55908144 55908167 -143721983 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1458 164 20 55 chr5 55908169 55908461 -143721689 - AluJo SINE Alu -30 282 1 4383 165 47 54 chr5 55908461 55908525 -143721625 + L1MB7 LINE L1 6101 6175 -9 1804 157 0 0 chr5 55909203 55909471 -143720679 - AluJb SINE Alu -19 293 26 237 211 96 0 chr5 55911202 55911254 -143718896 - MIR3 SINE MIR -29 179 123 1582 136 68 8 chr5 55911654 55911919 -143718231 - AluSx SINE Alu -6 306 26 490 283 23 46 chr5 55911940 55912113 -143718037 - MIR3 SINE MIR -15 193 25 2138 115 3 16 chr5 55912321 55912635 -143717515 - AluSx SINE Alu -2 310 1 248 266 64 32 chr5 55914260 55914354 -143715796 - MIR SINE MIR -56 206 110 2115 127 3 0 chr5 55915544 55915836 -143714314 - AluSx SINE Alu -19 293 1 1718 171 0 23 chr5 55916021 55916320 -143713830 + AluJo SINE Alu 1 292 -20 2463 49 0 32 chr5 55916522 55916830 -143713320 - AluY SINE Alu -13 298 1 1232 189 35 31 chr5 55917871 55918157 -143711993 - AluJo SINE Alu -25 287 1 1141 299 143 31 chr5 55918775 55919521 -143710629 + L2 LINE L2 2144 2973 -341 1135 68 0 0 chr5 55920839 55920972 -143709178 - AluSq/x SINE Alu -180 133 1 921 184 7 0 chr5 55921014 55921166 -143708984 - Tigger3(Golem) DNA MER2_type -1 3028 2876 279 269 0 0 chr5 55921405 55921472 -143708678 + MIR SINE MIR 117 183 -79 300 114 0 0 chr5 55922792 55922836 -143707314 - L2 LINE L2 -6 3307 3264 31 58 0 0 chr5 55923124 55923176 -143706974 + AT_rich Low_complexity Low_complexity 1 52 0 1933 144 0 20 chr5 55923643 55923960 -143706190 + AluSx SINE Alu 1 312 0 1557 172 0 32 chr5 55924231 55924510 -143705640 + AluJo SINE Alu 32 301 -11 1904 106 46 14 chr5 55924793 55925075 -143705075 - AluSx SINE Alu -21 291 1 186 43 0 0 chr5 55928731 55928754 -143701396 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1168 123 0 0 chr5 55928759 55928914 -143701236 - AluSg SINE Alu -31 281 127 624 152 0 0 chr5 55928915 55929007 -143701143 - AluSg SINE Alu -218 92 1 334 309 158 36 chr5 55929222 55929495 -143700655 - L1M4 LINE L1 -1945 4201 3872 488 120 65 0 chr5 55929495 55929587 -143700563 - L1MA5A LINE L1 -2 6295 6198 334 309 158 36 chr5 55929587 55929675 -143700475 - L1M4 LINE L1 -2274 3872 3796 1939 151 10 0 chr5 55931433 55931732 -143698418 - AluJb SINE Alu -10 302 1 21 0 0 0 chr5 55931827 55931848 -143698302 + AT_rich Low_complexity Low_complexity 1 21 0 219 181 0 0 chr5 55931990 55932062 -143698088 + GA-rich Low_complexity Low_complexity 2 73 0 23 0 0 0 chr5 55932128 55932151 -143697999 + AT_rich Low_complexity Low_complexity 1 23 0 4135 166 53 9 chr5 55932643 55933457 -143696693 + L1MC1 LINE L1 5483 6332 -1 5044 184 38 23 chr5 55933586 55935789 -143694361 - L1MC2 LINE L1 -1 6343 4111 464 287 8 16 chr5 55935936 55936058 -143694092 - L2 LINE L2 0 3313 3193 2121 108 0 0 chr5 55941614 55941893 -143688257 + AluSg SINE Alu 22 300 -10 873 238 149 37 chr5 55942575 55943115 -143687035 - L2 LINE L2 -172 3141 2525 2367 86 0 0 chr5 55944613 55944905 -143685245 - AluSg SINE Alu -18 292 1 1814 175 7 0 chr5 55945027 55945335 -143684815 - AluJb SINE Alu -2 310 1 23 0 0 0 chr5 55946344 55946367 -143683783 + AT_rich Low_complexity Low_complexity 1 23 0 211 307 161 15 chr5 55946455 55946592 -143683558 - MIR SINE MIR -83 179 23 2343 105 0 0 chr5 55947333 55947639 -143682511 + AluSx SINE Alu 1 306 -6 865 125 0 29 chr5 55947664 55947800 -143682350 + FLAM_C SINE Alu 2 133 0 294 194 0 0 chr5 55948244 55948306 -143681844 + (TA)n Simple_repeat Simple_repeat 2 63 0 209 176 0 0 chr5 55948446 55948480 -143681670 - L2 LINE L2 -15 3257 3224 192 215 13 114 chr5 55948447 55948526 -143681624 - MIR SINE MIR -10 252 182 * 2068 102 18 3 chr5 55948842 55949125 -143681025 - AluSg SINE Alu -10 300 14 338 251 84 0 chr5 55950094 55950192 -143679958 - MIR SINE MIR -67 141 47 365 318 111 57 chr5 55950805 55951463 -143678687 + L1M2 LINE L1 602 1363 -5486 370 167 0 0 chr5 55952060 55952132 -143678018 - L1MA10 LINE L1 -7 6327 6256 546 275 41 8 chr5 55952201 55952405 -143677745 - L1 LINE L1 -2365 3781 3564 2271 72 3 30 chr5 55952633 55952937 -143677213 + AluSx SINE Alu 1 296 -16 348 233 0 0 chr5 55953348 55953434 -143676716 - L1 LINE L1 -3055 3091 3006 323 260 87 67 chr5 55953731 55953985 -143676165 - L1M4 LINE L1 -2098 4048 3790 2651 229 64 36 chr5 55954056 55954459 -143675691 - L1M4 LINE L1 -2580 3566 3176 467 256 111 0 chr5 55954459 55954576 -143675574 - FLAM_C SINE Alu -3 130 1 2651 229 64 36 chr5 55954576 55955122 -143675028 - L1M4 LINE L1 -2970 3176 2590 1524 138 0 29 chr5 55955416 55955656 -143674494 - AluJo SINE Alu -79 233 1 287 226 95 0 chr5 55955795 55955879 -143674271 - L2 LINE L2 -118 3195 3104 464 279 165 13 chr5 55955890 55956048 -143674102 + LTR33 LTR ERVL 1 182 -339 443 255 111 20 chr5 55956123 55956276 -143673874 + LTR33 LTR ERVL 344 510 -11 1212 280 112 27 chr5 55956296 55956432 -143673718 - L2 LINE L2 -220 3093 2970 2157 173 31 12 chr5 55956432 55956848 -143673302 + MSTB LTR MaLR 1 424 -2 1212 280 112 27 chr5 55956848 55957253 -143672897 - L2 LINE L2 -343 2970 2488 229 241 317 21 chr5 55957256 55957401 -143672749 - L2 LINE L2 -972 2342 2155 452 304 134 28 chr5 55957406 55957689 -143672461 - L2 LINE L2 -1374 1940 1628 23 33 0 0 chr5 55957921 55957951 -143672199 + AT_rich Low_complexity Low_complexity 1 30 0 2082 178 43 33 chr5 55958038 55958278 -143671872 + Charlie1b DNA MER1_type 1 237 -2524 2288 101 0 0 chr5 55958278 55958574 -143671576 + AluSx SINE Alu 1 296 -16 2082 178 43 33 chr5 55958574 55958845 -143671305 + Charlie1b DNA MER1_type 237 517 -6 558 275 7 0 chr5 55959052 55959190 -143670960 - MER91B DNA MER1_type -27 163 25 977 52 15 0 chr5 55959523 55959658 -143670492 + (TGGA)n Simple_repeat Simple_repeat 2 138 0 292 301 35 18 chr5 55960606 55960719 -143669431 + MLT1J LTR MaLR 297 411 -100 590 325 86 34 chr5 55960788 55961321 -143668829 + L2 LINE L2 2200 2760 -554 2294 103 3 7 chr5 55961915 55962225 -143667925 + AluSc SINE Alu 1 309 0 577 229 8 0 chr5 55962382 55962500 -143667650 + Charlie8 DNA MER1_type 84 202 -2215 426 275 197 0 chr5 55962617 55962814 -143667336 - MIR SINE MIR -10 252 17 24 32 0 0 chr5 55963096 55963127 -143667023 + AT_rich Low_complexity Low_complexity 1 31 0 1961 120 7 0 chr5 55963274 55963549 -143666601 + AluSx SINE Alu 36 312 0 1656 223 127 20 chr5 55963669 55964172 -143665978 + L1MC4 LINE L1 6458 7014 -1028 1868 216 136 19 chr5 55964176 55964764 -143665386 + L1MC4 LINE L1 7080 7736 -306 493 141 4 11 chr5 55964765 55964861 -143665289 + L1MC4 LINE L1 7849 8040 -2 26 50 0 0 chr5 55964934 55964974 -143665176 + AT_rich Low_complexity Low_complexity 1 40 0 192 97 0 0 chr5 55965626 55965657 -143664493 + (A)n Simple_repeat Simple_repeat 1 31 0 235 355 91 25 chr5 55967581 55967702 -143662448 + L3 LINE CR1 1449 1577 0 23 33 0 0 chr5 55968022 55968052 -143662098 + AT_rich Low_complexity Low_complexity 1 30 0 369 337 12 26 chr5 55968274 55968561 -143661589 - L1MEc LINE L1 -826 1750 1518 7836 36 13 4 chr5 55968588 55969584 -143660566 + L1P LINE L1 4260 5264 -882 194 125 21 0 chr5 55969836 55969884 -143660266 + (TG)n Simple_repeat Simple_repeat 2 50 0 1658 163 10 21 chr5 55969958 55970247 -143659903 - AluJo SINE Alu -26 286 1 510 287 33 28 chr5 55970378 55970559 -143659591 - L1MC/D LINE L1 -2107 5701 5520 550 325 29 42 chr5 55971169 55971409 -143658741 - MIR SINE MIR -24 238 2 2118 121 24 0 chr5 55971550 55971847 -143658303 + AluSx SINE Alu 1 304 -8 198 103 0 0 chr5 55971933 55971962 -143658188 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 371 323 0 0 chr5 55971967 55972066 -143658084 - MER82 DNA MER2_type -553 100 2 2181 191 23 8 chr5 55972129 55972522 -143657628 - MER47B DNA MER2_type 0 418 20 1727 154 20 10 chr5 55973949 55974242 -143655908 + AluJo SINE Alu 1 296 -16 529 308 93 6 chr5 55974362 55974539 -143655611 + MIR3 SINE MIR 2 193 -15 2154 134 0 0 chr5 55974591 55974890 -143655260 - AluSx SINE Alu -13 299 1 25 0 0 0 chr5 55974892 55974917 -143655233 + AT_rich Low_complexity Low_complexity 1 25 0 2089 134 7 0 chr5 55976847 55977145 -143653005 - AluSx SINE Alu -12 300 1 1681 193 0 7 chr5 55977820 55978105 -143652045 - AluJo SINE Alu -29 283 1 234 0 0 0 chr5 55978964 55978990 -143651160 + (TTG)n Simple_repeat Simple_repeat 1 26 0 579 162 15 37 chr5 55982088 55982224 -143647926 + L1MC4 LINE L1 6971 7103 -939 23 0 0 0 chr5 55982283 55982306 -143647844 + AT_rich Low_complexity Low_complexity 1 23 0 3229 189 61 52 chr5 55982316 55982554 -143647596 + L1MC4a LINE L1 6858 7092 -950 1372 92 15 0 chr5 55982554 55982750 -143647400 - L1PA7 LINE L1 -4 6150 5952 3229 189 61 52 chr5 55982750 55983510 -143646640 + L1MC4a LINE L1 7092 7921 -121 494 268 20 13 chr5 55983901 55984054 -143646096 - MER103 DNA DNA -12 154 1 500 259 156 49 chr5 55984183 55984407 -143645743 - MIR SINE MIR 0 262 15 878 163 17 109 chr5 55984653 55984892 -143645258 + MER20 DNA MER1_type 2 218 -1 236 29 0 29 chr5 55985284 55985318 -143644832 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1017 59 66 0 chr5 55985318 55985454 -143644696 - MER107 DNA MER1_type -52 145 1 194 0 39 0 chr5 55986370 55986396 -143643754 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 610 259 82 20 chr5 55989525 55989780 -143640370 + L1ME LINE L1 5523 5793 -328 276 286 73 47 chr5 55990014 55990405 -143639745 + L1ME4a LINE L1 5482 5933 -188 215 312 52 0 chr5 55990652 55990729 -143639421 - MIR SINE MIR -64 144 64 379 22 0 0 chr5 55990836 55990882 -143639268 + MADE1 DNA Mariner 1 46 -34 283 98 0 0 chr5 55990896 55990937 -143639213 - MADE1 DNA Mariner -27 53 13 28 0 0 0 chr5 55991462 55991490 -143638660 + AT_rich Low_complexity Low_complexity 1 28 0 1102 180 18 5 chr5 55991518 55991740 -143638410 - L1MB3 LINE L1 0 6183 5959 1218 124 0 98 chr5 55991740 55991965 -143638185 - AluJo SINE Alu -27 285 83 1422 120 99 0 chr5 55991971 55992213 -143637937 - L1MB2 LINE L1 -177 5994 5729 318 276 46 54 chr5 55992205 55992330 -143637820 - L1MB3 LINE L1 -288 5833 5709 * 2449 82 0 0 chr5 55992330 55992636 -143637514 + AluY SINE Alu 1 306 -5 318 276 46 54 chr5 55992636 55992749 -143637401 - L1MB3 LINE L1 -412 5709 5597 607 243 21 0 chr5 55992753 55992893 -143637257 + MER58A DNA MER1_type 30 172 -52 353 276 162 61 chr5 55992970 55993531 -143636619 - L1ME4a LINE L1 -175 5946 5329 468 191 0 0 chr5 55993882 55993966 -143636184 + AluJ/FLAM SINE Alu 1 84 -228 297 51 0 0 chr5 55994559 55994598 -143635552 + (CATA)n Simple_repeat Simple_repeat 4 42 0 1705 145 47 7 chr5 55994606 55994882 -143635268 - AluJo SINE Alu -24 288 2 2134 104 13 3 chr5 55996341 55996639 -143633511 + AluSg SINE Alu 1 301 -9 2648 165 52 2 chr5 55997218 55997697 -143632453 + L1MB7 LINE L1 5490 5992 -186 577 272 85 37 chr5 55997704 55997849 -143632301 - MER93a LTR ERV1 0 402 265 180 0 0 0 chr5 55997849 55997869 -143632281 + (CAAAG)n Simple_repeat Simple_repeat 1 20 0 577 272 85 37 chr5 55997869 55997995 -143632155 - MER93a LTR ERV1 -137 265 118 736 227 6 0 chr5 55998042 55998214 -143631936 + L1MB7 LINE L1 6012 6184 0 547 309 21 26 chr5 55998252 55998485 -143631665 + L1MC4a LINE L1 5594 5825 -1983 321 230 11 11 chr5 55998583 55998673 -143631477 + MLT1F LTR MaLR 20 80 -462 444 216 313 40 chr5 55998793 55998969 -143631181 + MLT1G1 LTR MaLR 283 546 -49 5118 184 60 36 chr5 55999253 55999424 -143630726 - Charlie1a DNA MER1_type -1574 1187 1021 2286 78 14 3 chr5 55999424 55999717 -143630433 - AluSx SINE Alu -8 304 9 5118 184 60 36 chr5 55999717 56000138 -143630012 - Charlie1a DNA MER1_type -1740 1021 611 2356 101 0 0 chr5 56000138 56000444 -143629706 - AluSq SINE Alu -7 306 1 5118 184 60 36 chr5 56000444 56001010 -143629140 - Charlie1a DNA MER1_type -2150 611 1 25 0 0 0 chr5 56001930 56001955 -143628195 + AT_rich Low_complexity Low_complexity 1 25 0 370 235 101 17 chr5 56002772 56002891 -143627259 - L3 LINE CR1 -114 1463 1335 420 333 80 27 chr5 56002970 56003195 -143626955 + L3 LINE CR1 1138 1374 -203 831 189 6 34 chr5 56003254 56003429 -143626721 + MER3 DNA MER1_type 9 131 -78 424 245 0 20 chr5 56003763 56003861 -143626289 - U13 snRNA snRNA 0 104 9 241 202 26 35 chr5 56005797 56005911 -143624239 + GA-rich Low_complexity Low_complexity 2 114 0 2163 91 11 3 chr5 56006553 56006840 -143623310 - AluSq SINE Alu -1 312 24 393 225 28 49 chr5 56006841 56006983 -143623167 - L1ME LINE L1 -448 5673 5535 340 309 182 30 chr5 56007079 56007549 -143622601 + L2 LINE L2 2721 3270 -2 655 225 35 6 chr5 56007749 56007918 -143622232 + MER104 DNA Tc2 5 178 -2 189 107 0 0 chr5 56008097 56008125 -143622025 + (TATG)n Simple_repeat Simple_repeat 3 30 0 191 345 55 64 chr5 56009055 56009165 -143620985 + L2 LINE L2 3119 3227 -45 2328 94 3 0 chr5 56009769 56010076 -143620074 + AluSp SINE Alu 1 308 -5 509 266 161 25 chr5 56010203 56010402 -143619748 - MIR SINE MIR -27 235 10 304 316 45 23 chr5 56011033 56011166 -143618984 - MIR SINE MIR -107 155 20 1774 156 3 23 chr5 56011641 56011948 -143618202 - AluJb SINE Alu -9 303 3 22 56 0 0 chr5 56012369 56012405 -143617745 + AT_rich Low_complexity Low_complexity 1 36 0 2071 124 3 0 chr5 56013409 56013700 -143616450 - AluSx SINE Alu -20 292 1 203 326 89 67 chr5 56016390 56016525 -143613625 - L2 LINE L2 -200 3072 2935 2483 40 33 7 chr5 56016536 56016839 -143613311 + AluY SINE Alu 1 311 0 403 248 28 28 chr5 56016881 56017022 -143613128 + MER103 DNA DNA 24 164 -2 207 0 0 0 chr5 56017462 56017485 -143612665 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 860 227 69 15 chr5 56018058 56018261 -143611889 + MIR SINE MIR 3 216 -46 229 265 48 12 chr5 56018314 56018397 -143611753 - MIR SINE MIR 0 262 177 436 304 91 18 chr5 56018506 56018726 -143611424 - MIR SINE MIR -21 241 6 204 284 17 26 chr5 56019838 56019954 -143610196 + GA-rich Low_complexity Low_complexity 2 116 0 2262 89 3 0 chr5 56020434 56020726 -143609424 - AluSx SINE Alu -19 293 1 2287 89 0 35 chr5 56020737 56021051 -143609099 - AluSg SINE Alu -7 303 1 592 274 61 15 chr5 56022128 56022325 -143607825 - LTR33 LTR ERVL -301 220 15 285 140 0 0 chr5 56022361 56022418 -143607732 + (CA)n Simple_repeat Simple_repeat 2 58 0 301 309 121 13 chr5 56022473 56022622 -143607528 + L2 LINE L2 2926 3090 -182 717 329 48 12 chr5 56022627 56022879 -143607271 - MIR SINE MIR 0 262 2 216 242 0 45 chr5 56022884 56022950 -143607200 + L2 LINE L2 3191 3253 -19 183 270 0 0 chr5 56022918 56022955 -143607195 + MIR SINE MIR 218 254 -8 * 505 242 148 11 chr5 56023554 56023736 -143606414 - MIR SINE MIR -6 256 50 780 313 212 24 chr5 56023863 56024705 -143605445 - L2 LINE L2 -56 3216 2215 259 326 31 47 chr5 56024758 56024887 -143605263 + MER5B DNA MER1_type 45 171 -7 1008 274 56 9 chr5 56024899 56025285 -143604865 + LTR16B LTR ERVL 1 464 0 624 358 141 34 chr5 56025285 56025488 -143604662 - L2 LINE L2 -1092 2222 2042 2192 99 0 30 chr5 56025488 56025791 -143604359 + AluSx SINE Alu 1 294 -18 624 358 141 34 chr5 56025791 56027489 -143602661 - L2 LINE L2 -1272 2042 117 193 213 160 0 chr5 56027896 56027971 -143602179 + L3b LINE CR1 1306 1392 -191 505 270 0 9 chr5 56029519 56029634 -143600516 + MER81 DNA DNA 1 114 0 428 260 60 0 chr5 56029634 56029734 -143600416 + MER81 DNA DNA 9 114 0 416 297 35 28 chr5 56029983 56030128 -143600022 - MER5A DNA MER1_type -3 186 41 469 289 51 41 chr5 56030289 56030486 -143599664 + MIR SINE MIR 59 257 -5 207 0 0 0 chr5 56030550 56030573 -143599577 + (T)n Simple_repeat Simple_repeat 1 23 0 1064 277 105 27 chr5 56031101 56031502 -143598648 + MLT1J2 LTR MaLR 13 444 -6 27 49 0 0 chr5 56031573 56031614 -143598536 + AT_rich Low_complexity Low_complexity 1 41 0 1593 167 56 21 chr5 56031796 56032084 -143598066 - AluJo SINE Alu -14 298 1 415 260 78 13 chr5 56032139 56032293 -143597857 - L1ME LINE L1 -333 5788 5625 2437 94 0 0 chr5 56032307 56032615 -143597535 - AluSc SINE Alu -1 308 1 2141 112 73 25 chr5 56034787 56035145 -143595005 - THE1C LTR MaLR 0 375 1 236 209 47 12 chr5 56035699 56035785 -143594365 + (TTCA)n Simple_repeat Simple_repeat 3 91 0 2208 169 77 20 chr5 56035894 56036297 -143593853 - MSTA LTR MaLR 0 428 3 3428 120 89 104 chr5 56037086 56037872 -143592278 + LTR1 LTR ERV1 1 774 -11 2162 106 25 0 chr5 56037906 56038190 -143591960 - AluSx SINE Alu -21 291 1 244 330 116 17 chr5 56038837 56039010 -143591140 + MIR SINE MIR 2 191 -71 191 312 32 65 chr5 56039211 56039304 -143590846 - MIR SINE MIR -109 153 64 775 125 179 30 chr5 56039942 56040110 -143590040 - MER20 DNA MER1_type 0 219 27 240 204 0 0 chr5 56040158 56040202 -143589948 - MIR SINE MIR 0 262 219 203 283 0 0 chr5 56040168 56040214 -143589936 - L2 LINE L2 -16 3256 3211 * 978 161 0 0 chr5 56040667 56040810 -143589340 - FRAM SINE Alu -24 152 10 657 169 81 48 chr5 56040850 56040974 -143589176 + FLAM_A SINE Alu 3 130 -3 490 280 106 48 chr5 56042411 56042840 -143587310 + L1ME3A LINE L1 5254 5733 -437 1117 228 103 44 chr5 56042840 56043275 -143586875 - LTR16B LTR ERVL -3 461 1 490 280 106 48 chr5 56043275 56043470 -143586680 + L1ME3A LINE L1 5733 5915 -255 3809 164 48 18 chr5 56044036 56044414 -143585736 - L1MB8 LINE L1 0 6178 5768 1436 185 41 38 chr5 56044414 56044706 -143585444 - AluJb SINE Alu -15 297 5 3809 164 48 18 chr5 56044706 56045014 -143585136 - L1MB8 LINE L1 -410 5768 5471 1714 207 37 4 chr5 56045281 56045689 -143584461 + MLT2B1 LTR ERVL 1 474 -41 424 0 36 0 chr5 56045689 56045745 -143584405 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 1714 207 37 4 chr5 56045745 56045787 -143584363 + MLT2B1 LTR ERVL 474 513 -2 1938 159 0 19 chr5 56046672 56046987 -143583163 - AluSx SINE Alu -3 309 1 2309 121 0 0 chr5 56046999 56047306 -143582844 - AluSx SINE Alu -5 307 1 693 236 217 38 chr5 56047328 56047646 -143582504 - L1ME2 LINE L1 -13 6151 5777 899 242 48 26 chr5 56047655 56047882 -143582268 + L1M4 LINE L1 3805 4040 -2106 3255 212 3 9 chr5 56047882 56048452 -143581698 - MLT1F1 LTR MaLR 0 567 1 899 242 48 26 chr5 56048452 56048497 -143581653 + L1M4 LINE L1 4040 4083 -2063 1522 208 42 78 chr5 56048501 56048977 -143581173 + L1M4 LINE L1 4574 5032 -1114 846 163 0 7 chr5 56049005 56049140 -143581010 - AluJo SINE Alu -178 134 1 253 261 19 62 chr5 56049140 56049167 -143580983 + L1M4 LINE L1 5023 5050 -1096 3553 149 12 42 chr5 56049167 56049738 -143580412 - MLT2B3 LTR ERVL 0 554 1 253 261 19 62 chr5 56049738 56049871 -143580279 + L1M4 LINE L1 5050 5176 -970 1294 144 10 10 chr5 56050224 56050432 -143579718 - MLT1A1 LTR MaLR -10 355 148 826 141 0 30 chr5 56050432 56050567 -143579583 - FLAM_C SINE Alu -12 131 1 802 195 0 27 chr5 56050568 56050717 -143579433 - MLT1A1 LTR MaLR -210 155 11 276 182 0 18 chr5 56050894 56050949 -143579201 - Charlie2 DNA MER1_type 0 2862 2809 837 224 26 42 chr5 56050965 56051157 -143578993 - L1ME3 LINE L1 -6 6156 5968 326 165 0 139 chr5 56051157 56051197 -143578953 - Charlie2 DNA MER1_type -54 2808 2764 2095 139 0 0 chr5 56051197 56051491 -143578659 + AluSx SINE Alu 1 294 -18 326 165 0 139 chr5 56051491 56051565 -143578585 - Charlie2 DNA MER1_type -98 2764 2710 892 210 0 18 chr5 56051621 56051788 -143578362 - FRAM SINE Alu -13 163 1 2114 100 10 26 chr5 56051800 56052109 -143578041 - AluSc SINE Alu -5 304 1 355 309 79 0 chr5 56052150 56052315 -143577835 - Charlie2 DNA MER1_type -2655 207 30 1345 139 14 5 chr5 56052315 56052524 -143577626 - MER20 DNA MER1_type 0 219 9 447 288 50 45 chr5 56053262 56053484 -143576666 - MER112 DNA MER1_type -37 223 1 1018 280 72 17 chr5 56053653 56053999 -143576151 + LTR16C LTR ERVL 89 453 -38 2001 135 79 22 chr5 56054017 56054372 -143575778 - THE1C LTR MaLR 0 375 1 438 286 193 12 chr5 56054421 56054592 -143575558 - MIR SINE MIR -14 248 47 1356 231 128 12 chr5 56054817 56055232 -143574918 + LTR33A LTR ERVL 61 523 0 2214 157 10 52 chr5 56055986 56056393 -143573757 + MLT1B LTR MaLR 1 390 0 236 211 53 18 chr5 56057210 56057267 -143572883 - L2 LINE L2 0 3272 3214 385 285 106 8 chr5 56057545 56057668 -143572482 + MIR SINE MIR 20 154 -108 27 62 0 0 chr5 56057820 56057868 -143572282 + AT_rich Low_complexity Low_complexity 1 48 0 1032 228 109 31 chr5 56058625 56058919 -143571231 + Charlie2a DNA MER1_type 384 700 -2162 644 165 103 49 chr5 56058986 56059210 -143570940 + Charlie2a DNA MER1_type 948 1183 -1679 1004 168 10 31 chr5 56059247 56059454 -143570696 - MLT1A2 LTR MaLR 0 374 187 183 80 0 0 chr5 56059458 56059483 -143570667 + (GA)n Simple_repeat Simple_repeat 2 26 0 261 182 12 15 chr5 56059500 56059566 -143570584 - MLT1A2 LTR MaLR -198 181 124 596 200 0 9 chr5 56059852 56059957 -143570193 - MLT1A2 LTR MaLR -270 104 1 * 5516 211 78 18 chr5 56059957 56061496 -143568654 + Charlie2a DNA MER1_type 1199 2830 -32 833 284 57 54 chr5 56061942 56062277 -143567873 + MER102b DNA MER1_type 1 336 -5 23 33 0 0 chr5 56062628 56062658 -143567492 + AT_rich Low_complexity Low_complexity 1 30 0 197 313 60 0 chr5 56062832 56062899 -143567251 + L2 LINE L2 3151 3221 -51 198 0 0 0 chr5 56064640 56064662 -143565488 + (T)n Simple_repeat Simple_repeat 1 22 0 2392 110 0 0 chr5 56065268 56065578 -143564572 - AluSx SINE Alu 0 312 3 251 314 47 12 chr5 56065579 56065665 -143564485 + MER5A DNA MER1_type 1 89 -100 315 71 0 0 chr5 56065667 56065709 -143564441 + (CA)n Simple_repeat Simple_repeat 2 43 0 5463 200 34 48 chr5 56065726 56065907 -143564243 + L1MD1 LINE L1 3740 3922 -2320 864 177 0 0 chr5 56065907 56066031 -143564119 - FLAM_C SINE Alu -9 124 1 5463 200 34 48 chr5 56066031 56067193 -143562957 + L1MD1 LINE L1 3922 5099 -1143 1670 151 37 4 chr5 56067193 56067464 -143562686 - AluSx SINE Alu -19 293 14 5463 200 34 48 chr5 56067464 56068440 -143561710 + L1MD1 LINE L1 5099 6017 -225 2243 153 249 29 chr5 56068440 56068950 -143561200 - LTR29 LTR ERV1 0 622 1 5463 200 34 48 chr5 56068950 56069165 -143560985 + L1MD1 LINE L1 6017 6234 -8 416 110 82 14 chr5 56069358 56069431 -143560719 - MADE1 DNA Mariner -2 78 1 207 308 15 15 chr5 56069549 56069614 -143560536 - MER5A DNA MER1_type -90 99 35 745 104 0 119 chr5 56070027 56070161 -143559989 + FLAM_C SINE Alu 1 118 -15 1632 129 94 24 chr5 56070591 56070711 -143559439 + AluJb SINE Alu 1 111 -201 189 0 0 0 chr5 56070711 56070732 -143559418 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1632 129 94 24 chr5 56070732 56070898 -143559252 + AluJb SINE Alu 111 307 -5 2229 75 13 33 chr5 56071230 56071483 -143558667 + L1PB1 LINE L1 5850 6098 -53 2311 109 3 0 chr5 56071483 56071787 -143558363 + AluSx SINE Alu 1 305 -7 2229 75 13 33 chr5 56071787 56071839 -143558311 + L1PB1 LINE L1 6098 6149 -2 190 374 0 30 chr5 56072133 56072232 -143557918 + MER5A DNA MER1_type 94 189 0 202 373 27 59 chr5 56072278 56072498 -143557652 + L2 LINE L2 2717 2929 -385 2186 123 0 0 chr5 56073107 56073400 -143556750 - AluSp SINE Alu -20 293 1 2338 89 7 10 chr5 56073529 56073833 -143556317 - AluSq SINE Alu -10 303 1 1947 163 3 6 chr5 56073967 56074280 -143555870 + AluSx SINE Alu 1 312 0 278 325 198 0 chr5 56074542 56074668 -143555482 - L2 LINE L2 -1 3271 3121 21 36 0 0 chr5 56075337 56075365 -143554785 + AT_rich Low_complexity Low_complexity 1 28 0 237 277 75 21 chr5 56075619 56075713 -143554437 + L1MD2 LINE L1 158 256 -5949 2316 80 0 7 chr5 56075825 56076155 -143553995 + AluSc SINE Alu 1 309 0 1984 159 0 0 chr5 56076291 56076592 -143553558 + AluJb SINE Alu 1 301 -11 1893 182 46 26 chr5 56076729 56077119 -143553031 - MER68 LTR ERV1 -2 560 163 1510 160 33 7 chr5 56077139 56077414 -143552736 - L1MB8 LINE L1 0 6178 5897 1055 190 0 66 chr5 56077438 56077490 -143552660 + AluJo SINE Alu 87 141 -171 1862 171 0 7 chr5 56077490 56077783 -143552367 + AluSx SINE Alu 3 293 -19 1055 190 0 66 chr5 56077783 56077972 -143552178 + AluJo SINE Alu 141 312 0 1122 107 42 12 chr5 56077973 56078141 -143552009 - MER68 LTR ERV1 -389 173 1 1404 195 130 32 chr5 56078217 56078556 -143551594 + L1MC3 LINE L1 7101 7472 -313 827 173 23 8 chr5 56078558 56078691 -143551459 + AluJo SINE Alu 2 136 -176 1940 146 9 0 chr5 56078691 56079006 -143551144 + L1MC3 LINE L1 7460 7777 -8 194 71 0 71 chr5 56079013 56079055 -143551095 + (TTATA)n Simple_repeat Simple_repeat 1 39 0 333 279 33 25 chr5 56079977 56080099 -143550051 + LTR67 LTR ERVL 435 557 0 189 203 101 63 chr5 56080262 56080342 -143549808 - L2 LINE L2 -253 3060 2696 409 231 42 7 chr5 56080768 56080911 -143549239 + L1MD2 LINE L1 2159 2306 -4090 * 832 143 48 85 chr5 56080901 56080933 -143549217 + L1MC2 LINE L1 6157 6189 -155 1283 195 99 71 chr5 56080933 56081126 -143549024 + MLT1A2 LTR MaLR 1 187 -187 234 0 0 0 chr5 56081126 56081152 -143548998 + (CA)n Simple_repeat Simple_repeat 2 27 0 1283 195 99 71 chr5 56081152 56081322 -143548828 + MLT1A2 LTR MaLR 187 374 0 832 143 48 85 chr5 56081322 56081478 -143548672 + L1MC2 LINE L1 6189 6338 -6 3062 240 9 12 chr5 56081478 56082282 -143547868 + L1MD2 LINE L1 2247 3047 -3168 1121 173 65 40 chr5 56082285 56082495 -143547655 + MLT1D LTR MaLR 1 219 -286 5547 109 30 14 chr5 56082495 56083263 -143546887 - LTR17 LTR ERV1 0 780 1 1121 173 65 40 chr5 56083263 56083300 -143546850 + MLT1D LTR MaLR 219 254 -251 563 159 88 9 chr5 56083311 56083424 -143546726 + MLT1D LTR MaLR 384 505 0 2286 231 45 12 chr5 56083474 56084080 -143546070 + L1MD2 LINE L1 3134 3759 -2456 1365 189 83 97 chr5 56084081 56084537 -143545613 - LTR7 LTR ERV1 0 450 1 3259 96 85 38 chr5 56084537 56085069 -143545081 - HERVH LTR ERV1 0 7713 7157 * 6582 131 1 16 chr5 56085062 56086083 -143544067 - HERVH LTR ERV1 -1697 6016 5011 4259 142 5 6 chr5 56086081 56087112 -143543038 - HERVH LTR ERV1 -2749 4258 3357 * 12564 137 13 25 chr5 56087112 56089168 -143540982 - HERVH LTR ERV1 -4883 2830 800 1782 198 28 51 chr5 56089226 56089696 -143540454 - HERVH LTR ERV1 -7254 459 1 1305 204 189 26 chr5 56089696 56090083 -143540067 - LTR7 LTR ERV1 0 450 1 512 230 4 115 chr5 56090083 56090228 -143539922 + L1MD2 LINE L1 3761 3866 -2349 2145 124 0 10 chr5 56090228 56090527 -143539623 + AluSx SINE Alu 10 305 -7 512 230 4 115 chr5 56090527 56090642 -143539508 + L1MD2 LINE L1 3866 3992 -2223 5099 201 60 49 chr5 56090662 56091041 -143539109 + L1MB3 LINE L1 3813 4186 -1960 231 36 0 0 chr5 56091041 56091069 -143539081 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 5099 201 60 49 chr5 56091069 56092184 -143537966 + L1MB3 LINE L1 4186 5323 -823 1496 131 62 44 chr5 56092185 56092459 -143537691 + L1MB3 LINE L1 5655 5933 -238 27 0 0 0 chr5 56092460 56092487 -143537663 + AT_rich Low_complexity Low_complexity 1 27 0 958 153 0 0 chr5 56092511 56092655 -143537495 - FRAM SINE Alu -31 145 2 2009 168 50 19 chr5 56092655 56093018 -143537132 - THE1C LTR MaLR 0 375 2 1058 188 11 69 chr5 56093025 56093301 -143536849 + L1MB3 LINE L1 5922 6181 -2 * 2233 227 42 103 chr5 56093297 56094209 -143535941 + L1MD2 LINE L1 5352 6207 -221 709 200 7 20 chr5 56094105 56094255 -143535895 + L1MA10 LINE L1 6243 6390 -13 * 481 267 79 30 chr5 56094463 56094628 -143535522 - MIR3 SINE MIR -11 197 25 2180 116 33 39 chr5 56094896 56095259 -143534891 + MER46B DNA MER2_type 1 236 0 198 240 20 20 chr5 56096225 56096275 -143533875 - MER5A DNA MER1_type -23 166 117 23 0 0 0 chr5 56096712 56096735 -143533415 + AT_rich Low_complexity Low_complexity 1 23 0 2161 123 7 0 chr5 56097274 56097607 -143532543 + AluSx SINE Alu 1 335 0 519 275 45 15 chr5 56097620 56097820 -143532330 + L1MC4 LINE L1 7837 8042 0 187 143 14 64 chr5 56098696 56098836 -143531314 + (TTTCG)n Simple_repeat Simple_repeat 2 134 0 2012 137 6 13 chr5 56098832 56099230 -143530920 - AluSx SINE Alu 0 396 1 205 233 75 128 chr5 56100183 56100316 -143529834 + MIR SINE MIR 92 217 -45 1691 110 44 0 chr5 56100630 56100857 -143529293 + AluSx SINE Alu 1 237 -75 664 184 0 0 chr5 56101374 56101472 -143528678 + FLAM_A SINE Alu 1 98 -44 295 250 61 90 chr5 56101478 56101822 -143528328 + L1ME4a LINE L1 5582 5915 -206 1733 198 10 0 chr5 56101880 56102188 -143527962 + AluJb SINE Alu 1 311 -1 321 118 0 0 chr5 56102189 56102240 -143527910 + (GGAA)n Simple_repeat Simple_repeat 3 53 0 998 221 65 34 chr5 56102257 56102737 -143527413 - MLT1H LTR MaLR -7 542 1 340 237 51 0 chr5 56102745 56102863 -143527287 + L1ME4a LINE L1 5984 6107 -14 1952 148 3 3 chr5 56102931 56103228 -143526922 - AluSx SINE Alu -15 297 1 310 229 193 8 chr5 56103229 56103473 -143526677 + L1ME4a LINE L1 5831 6119 -2 800 239 71 0 chr5 56103904 56104059 -143526091 - MER96 DNA MER1_type? -9 166 1 235 374 35 47 chr5 56104139 56104479 -143525671 - LTR16C LTR ERVL 0 491 156 2196 238 62 32 chr5 56104491 56105083 -143525067 + Zaphod DNA AcHobo 1 610 -3421 702 251 329 3 chr5 56105080 56105423 -143524727 + LTR50 LTR ERVL 18 472 -323 * 307 259 231 0 chr5 56105450 56105593 -143524557 + LTR50 LTR ERVL 619 794 -1 746 212 45 52 chr5 56105593 56105881 -143524269 + Zaphod DNA AcHobo 614 899 -3132 2265 119 9 19 chr5 56105900 56106261 -143523889 - MLT2C1 LTR ERVL -48 349 1 29 70 0 0 chr5 56106262 56106319 -143523831 + AT_rich Low_complexity Low_complexity 1 57 0 289 197 0 49 chr5 56106464 56106525 -143523625 - Zaphod DNA AcHobo 0 4031 3974 * 1235 166 17 60 chr5 56106514 56106815 -143523335 - Zaphod DNA AcHobo -2671 1360 1073 238 200 62 31 chr5 56106820 56106885 -143523265 - L3 LINE CR1 -427 1150 1084 361 329 132 0 chr5 56107090 56107303 -143522847 + L1ME4a LINE L1 5582 5822 -299 281 257 162 9 chr5 56107452 56107557 -143522593 + L1ME4a LINE L1 5967 6087 -34 2070 111 42 3 chr5 56107630 56107918 -143522232 - AluSq SINE Alu -14 299 1 185 307 128 58 chr5 56107978 56108252 -143521898 + L2 LINE L2 1362 1654 -1660 733 124 138 0 chr5 56108253 56108398 -143521752 - L1M LINE L1 -766 5418 5254 740 232 119 91 chr5 56108420 56108705 -143521445 - LTR16A LTR ERVL -164 286 1 1657 231 116 74 chr5 56108732 56108958 -143521192 - MER21B LTR ERV1 -124 739 524 2384 44 47 7 chr5 56108958 56109256 -143520894 + AluY SINE Alu 1 310 -1 1657 231 116 74 chr5 56109256 56109721 -143520429 - MER21B LTR ERV1 -339 524 19 376 194 48 29 chr5 56109733 56109836 -143520314 - MER103 DNA DNA -60 106 2 537 207 140 67 chr5 56109967 56110053 -143520097 - MER45A DNA AcHobo -1403 178 100 839 159 0 36 chr5 56110053 56110191 -143519959 + FLAM_C SINE Alu 1 133 0 537 207 140 67 chr5 56110191 56110268 -143519882 - MER45A DNA AcHobo -1481 100 3 282 322 129 16 chr5 56110279 56110596 -143519554 + L2 LINE L2 2383 2735 -579 326 208 0 14 chr5 56110976 56111048 -143519102 + MIR SINE MIR 96 166 -96 204 40 0 0 chr5 56111602 56111627 -143518523 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1899 148 0 10 chr5 56111634 56111924 -143518226 - AluSx SINE Alu -25 287 1 2120 124 0 10 chr5 56111953 56112251 -143517899 + AluSq SINE Alu 1 295 -18 656 197 0 15 chr5 56112918 56113050 -143517100 - L1ME LINE L1 -378 5786 5657 2026 229 128 81 chr5 56113050 56113484 -143516666 - L1ME LINE L1 -964 5182 4770 566 208 139 0 chr5 56113484 56113585 -143516565 - FLAM_A SINE Alu -17 116 2 2026 229 128 81 chr5 56113585 56113734 -143516416 - L1ME LINE L1 -1376 4770 4629 2125 141 3 0 chr5 56113734 56114039 -143516111 + AluSq SINE Alu 1 306 -7 2026 229 128 81 chr5 56114039 56114564 -143515586 - L1ME LINE L1 -1517 4629 4021 1089 214 145 68 chr5 56114669 56115084 -143515066 + MER39 LTR ERV1 261 707 0 28 71 0 0 chr5 56115251 56115307 -143514843 + AT_rich Low_complexity Low_complexity 1 56 0 296 284 9 17 chr5 56115509 56115625 -143514525 - L1M4 LINE L1 -1907 4239 4125 1899 138 3 7 chr5 56115756 56116065 -143514085 + AluSx SINE Alu 1 308 0 858 343 99 33 chr5 56117159 56117231 -143512919 - L3 LINE CR1 -514 1063 997 1912 155 0 3 chr5 56117231 56117527 -143512623 + AluSx SINE Alu 2 296 -16 858 343 99 33 chr5 56117527 56118153 -143511997 - L3 LINE CR1 -580 997 319 2340 103 0 0 chr5 56118253 56118555 -143511595 - AluSg SINE Alu -8 302 1 245 217 0 58 chr5 56119085 56119154 -143510996 + AluS SINE Alu 2 59 -244 1531 171 11 15 chr5 56119175 56119444 -143510706 + AluJo SINE Alu 41 308 -4 28 48 0 0 chr5 56119553 56119595 -143510555 + AT_rich Low_complexity Low_complexity 1 42 0 2405 98 0 0 chr5 56120761 56121067 -143509083 + AluSx SINE Alu 1 306 -6 551 245 114 16 chr5 56121494 56121678 -143508472 + MER63A DNA MER1_type 1 202 -8 511 291 100 14 chr5 56121798 56122018 -143508132 - MIR SINE MIR -17 245 7 324 0 0 0 chr5 56122195 56122231 -143507919 + (TG)n Simple_repeat Simple_repeat 2 37 0 2493 84 0 0 chr5 56123785 56124093 -143506057 - AluSg SINE Alu -2 308 1 662 98 22 11 chr5 56124454 56124546 -143505604 + Charlie3 DNA MER1_type 2610 2702 -8 269 221 71 88 chr5 56124664 56124727 -143505423 - MER81 DNA DNA 0 114 52 2236 112 0 3 chr5 56124727 56125031 -143505119 + AluSp SINE Alu 1 303 -10 269 221 71 88 chr5 56125031 56125080 -143505070 - MER81 DNA DNA -62 52 4 2451 170 40 44 chr5 56125111 56125612 -143504538 + MLT1D LTR MaLR 3 501 -4 240 118 0 0 chr5 56126015 56126049 -143504101 - MADE1 DNA Mariner -45 35 2 366 291 99 58 chr5 56126111 56126240 -143503910 - L1M4 LINE L1 -1377 4769 4647 1599 178 24 17 chr5 56126240 56126394 -143503756 - AluJb SINE Alu -23 289 138 423 0 0 0 chr5 56126394 56126441 -143503709 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2229 78 0 7 chr5 56126441 56126725 -143503425 - AluY SINE Alu -29 282 1 1599 178 24 17 chr5 56126725 56126856 -143503294 - AluJb SINE Alu -173 139 1 366 291 99 58 chr5 56126856 56127400 -143502750 - L1M4 LINE L1 -1499 4647 4068 1935 152 20 0 chr5 56127581 56127877 -143502273 + AluSx SINE Alu 1 302 -10 263 242 0 0 chr5 56127906 56127968 -143502182 - L1MC5 LINE L1 -733 7228 7167 1810 169 3 10 chr5 56127975 56128277 -143501873 - AluJo SINE Alu -12 300 1 2050 128 0 14 chr5 56128307 56128604 -143501546 + AluSx SINE Alu 1 293 -19 422 347 48 29 chr5 56128680 56128698 -143501452 + L2 LINE L2 2777 2793 -479 1556 221 88 34 chr5 56128698 56128967 -143501183 - MLT1C LTR MaLR 0 467 163 2289 112 3 0 chr5 56128967 56129272 -143500878 - AluSx SINE Alu -6 306 1 1556 221 88 34 chr5 56129272 56129445 -143500705 - MLT1C LTR MaLR -304 163 1 422 347 48 29 chr5 56129445 56129749 -143500401 + L2 LINE L2 2793 3117 -155 526 265 149 6 chr5 56130759 56130940 -143499210 + L1ME3A LINE L1 5756 5962 -208 1904 146 28 0 chr5 56130976 56131264 -143498886 + AluSx SINE Alu 3 298 -14 507 132 22 0 chr5 56131867 56131958 -143498192 - L1MA9 LINE L1 -32 6280 6188 2006 135 92 3 chr5 56131958 56132285 -143497865 + MSTA LTR MaLR 73 428 0 3287 147 59 58 chr5 56132337 56132674 -143497476 - L1MA9 LINE L1 -140 6172 5832 2192 120 0 0 chr5 56132674 56132975 -143497175 + AluSx SINE Alu 1 301 -11 3287 147 59 58 chr5 56132975 56133297 -143496853 - L1MA9 LINE L1 -480 5832 5512 735 211 39 33 chr5 56133311 56133671 -143496479 - AluJ SINE Alu 0 312 130 1063 193 19 39 chr5 56133782 56134093 -143496057 - L1MA9 LINE L1 -743 5403 5099 3394 171 89 40 chr5 56134094 56134747 -143495403 + MER44D DNA MER2_type 2 565 -1922 3366 163 6 8 chr5 56134747 56135249 -143494901 + MER61D LTR ERV1 1 501 0 3394 171 89 40 chr5 56135249 56135292 -143494858 + MER44D DNA MER2_type 565 604 -1 386 266 0 0 chr5 56135292 56135386 -143494764 - L1MA9 LINE L1 -1045 5101 5008 21 0 0 0 chr5 56135607 56135628 -143494522 + AT_rich Low_complexity Low_complexity 1 21 0 2335 76 3 0 chr5 56135758 56136048 -143494102 + AluY SINE Alu 1 291 -20 3142 112 58 58 chr5 56136406 56136953 -143493197 - LTR10A LTR ERV1 -62 547 1 250 255 59 0 chr5 56137217 56137268 -143492882 - MIR SINE MIR -191 71 18 929 161 0 0 chr5 56137764 56137894 -143492256 - AluJ SINE Alu -172 130 1 948 224 16 129 chr5 56137922 56138310 -143491840 - MER34 LTR ERV1 -198 344 1 357 229 0 0 chr5 56138335 56138405 -143491745 + MIR SINE MIR 159 228 -34 2285 97 0 0 chr5 56138770 56139059 -143491091 - AluSg SINE Alu -21 289 1 199 153 186 102 chr5 56139120 56139179 -143490971 + MER5B DNA MER1_type 111 174 -4 737 205 8 8 chr5 56139513 56139640 -143490510 - FLAM_A SINE Alu -5 128 2 2191 112 0 3 chr5 56140138 56140448 -143489702 + AluSx SINE Alu 1 309 0 848 154 5 5 chr5 56140468 56140682 -143489468 + GA-rich Low_complexity Low_complexity 1 214 0 329 277 76 25 chr5 56141249 56141268 -143488882 + MIR SINE MIR 18 35 -227 2304 99 10 0 chr5 56141268 56141570 -143488580 + AluSq SINE Alu 1 305 -8 329 277 76 25 chr5 56141570 56141669 -143488481 + MIR SINE MIR 35 142 -120 2042 107 11 4 chr5 56141709 56141990 -143488160 + AluSq SINE Alu 23 305 -8 518 276 36 47 chr5 56142014 56142206 -143487944 + MIR SINE MIR 70 259 -3 1270 217 13 54 chr5 56142689 56142834 -143487316 + AluJo SINE Alu 2 151 -151 1874 129 29 7 chr5 56142834 56143113 -143487037 + AluSx SINE Alu 11 295 -17 1270 217 13 54 chr5 56143113 56143281 -143486869 + AluJo SINE Alu 151 302 0 592 292 116 0 chr5 56143343 56143672 -143486478 + L1M4 LINE L1 3945 4311 -1835 409 217 0 0 chr5 56143776 56143868 -143486282 + L1M4 LINE L1 4468 4559 -1587 1944 127 48 3 chr5 56143872 56144164 -143485986 + AluSx SINE Alu 1 305 -7 2731 213 38 45 chr5 56144174 56144728 -143485422 - L1MCc LINE L1 -2982 3444 2897 1912 92 53 25 chr5 56144728 56145049 -143485101 - AluSx SINE Alu 0 312 1 2731 213 38 45 chr5 56145049 56145331 -143484819 - L1MCc LINE L1 -3529 2897 2614 298 262 16 0 chr5 56145349 56145410 -143484740 - Tigger2a DNA MER2_type -10 424 363 660 206 56 0 chr5 56145434 56145560 -143484590 - FLAM_A SINE Alu 0 133 1 2101 113 25 91 chr5 56145567 56145724 -143484426 - Tigger2a DNA MER2_type -2337 371 205 501 88 25 0 chr5 56145724 56145804 -143484346 + L1PB1 LINE L1 6069 6150 -1 2101 113 25 91 chr5 56145804 56146043 -143484107 - Tigger2a DNA MER2_type -2503 205 1 289 158 8 158 chr5 56146043 56146105 -143484045 - L1MCc LINE L1 -3952 2655 2585 2262 92 7 0 chr5 56146105 56146398 -143483752 - AluSx SINE Alu -17 295 1 809 183 16 0 chr5 56146401 56146527 -143483623 - FLAM_A SINE Alu -5 128 1 289 158 8 158 chr5 56146527 56146580 -143483570 - L1MCc LINE L1 -4024 2583 2554 6257 118 172 57 chr5 56146606 56147011 -143483139 - L1MCc LINE L1 -3897 2529 2172 2204 102 0 3 chr5 56147011 56147295 -143482855 + AluSg SINE Alu 1 283 -27 6257 118 172 57 chr5 56147295 56147853 -143482297 - L1MCc LINE L1 -4254 2172 1679 865 182 0 0 chr5 56147853 56147985 -143482165 - FLAM_C SINE Alu 0 133 2 6257 118 172 57 chr5 56147985 56148387 -143481763 - L1MCc LINE L1 -4747 1679 1325 1927 130 47 3 chr5 56148387 56148686 -143481464 - AluSx SINE Alu 0 312 1 6257 118 172 57 chr5 56148686 56148769 -143481381 - L1MCc LINE L1 -5101 1325 911 1444 162 43 10 chr5 56149180 56149788 -143480362 - L1MCc LINE L1 -5488 938 198 1053 227 25 17 chr5 56149790 56150028 -143480122 - L1MCc LINE L1 -6173 253 14 2062 126 0 25 chr5 56150042 56150359 -143479791 + AluY SINE Alu 2 310 -1 2291 266 72 31 chr5 56150428 56150686 -143479464 + L1ME3A LINE L1 5317 5563 -607 1867 145 0 35 chr5 56150686 56150997 -143479153 + AluJo SINE Alu 1 300 -12 2291 266 72 31 chr5 56150997 56151546 -143478604 + L1ME3A LINE L1 5563 6157 -13 2126 117 157 21 chr5 56151831 56152208 -143477942 + MSTA LTR MaLR 1 428 0 190 302 0 16 chr5 56152223 56152286 -143477864 - L3 LINE CR1 -13 1564 1503 1370 190 147 150 chr5 56152516 56153162 -143476988 - MLT1G1 LTR MaLR 0 590 1 2194 114 0 7 chr5 56153312 56153609 -143476541 - AluSx SINE Alu -17 295 1 195 333 73 85 chr5 56153763 56153940 -143476210 + MIR SINE MIR 19 193 -69 8387 104 27 75 chr5 56153980 56154519 -143475631 + Tigger1 DNA MER2_type 1 564 -1854 2171 125 0 35 chr5 56154519 56154838 -143475312 + AluSx SINE Alu 1 308 -4 8387 104 27 75 chr5 56154838 56154866 -143475284 + Tigger1 DNA MER2_type 564 592 -1826 6768 46 1 0 chr5 56154866 56155648 -143474502 + L1PA7 LINE L1 5372 6154 0 8387 104 27 75 chr5 56155648 56156513 -143473637 + Tigger1 DNA MER2_type 592 1365 -1053 763 106 18 0 chr5 56157102 56157215 -143472935 + Tigger1 DNA MER2_type 1363 1477 -941 2181 104 38 0 chr5 56157218 56157506 -143472644 + AluSg SINE Alu 1 299 -11 1244 166 14 5 chr5 56157515 56157726 -143472424 + AluJb SINE Alu 85 297 -15 839 88 18 0 chr5 56157727 56157840 -143472310 + Tigger1 DNA MER2_type 1471 1585 -833 3448 121 16 4 chr5 56157887 56158392 -143471758 + Tigger1 DNA MER2_type 1577 2087 -331 874 262 0 0 chr5 56158393 56158557 -143471593 + FRAM SINE Alu 1 164 -12 2035 144 50 0 chr5 56158557 56158876 -143471274 + Tigger1 DNA MER2_type 2084 2418 0 2281 112 0 0 chr5 56159397 56159692 -143470458 + AluSx SINE Alu 4 298 -14 2303 113 0 0 chr5 56159866 56160177 -143469973 + AluSx SINE Alu 1 311 -1 304 250 66 0 chr5 56160430 56160506 -143469644 + MER81 DNA DNA 1 81 -33 277 128 0 0 chr5 56160515 56160554 -143469596 - Alu SINE Alu -261 40 2 1189 128 57 38 chr5 56160573 56160784 -143469366 + AluSq SINE Alu 85 299 -14 2236 124 0 3 chr5 56160792 56161098 -143469052 + AluSx SINE Alu 1 305 -7 1961 137 6 19 chr5 56161215 56161560 -143468590 - AluSx SINE Alu 0 341 1 376 241 172 0 chr5 56161604 56161749 -143468401 + L1MC4 LINE L1 7587 7756 -286 9640 146 54 8 chr5 56161774 56164622 -143465528 + L1PB1 LINE L1 58 3246 -3616 3274 128 43 17 chr5 56164622 56165155 -143464995 + LTR10A LTR ERV1 1 547 -62 13466 186 9 34 chr5 56165168 56166153 -143463997 + L1PB1 LINE L1 3243 4251 -2616 2206 105 10 0 chr5 56166153 56166447 -143463703 + AluSp SINE Alu 1 297 -16 1623 147 121 0 chr5 56166457 56166729 -143463421 + AluSx SINE Alu 1 305 -7 13466 186 9 34 chr5 56166729 56167522 -143462628 + L1PB1 LINE L1 4260 5071 -1796 2330 107 0 0 chr5 56167522 56167830 -143462320 + AluSc SINE Alu 1 308 -1 13466 186 9 34 chr5 56167830 56168877 -143461273 + L1PB1 LINE L1 5071 6019 -848 2258 94 3 0 chr5 56168877 56169164 -143460986 + AluSp SINE Alu 1 288 -25 13466 186 9 34 chr5 56169164 56169336 -143460814 + L1PB1 LINE L1 6019 6194 -673 226 81 0 0 chr5 56169337 56169374 -143460776 + AluSp SINE Alu 264 300 0 2406 134 24 5 chr5 56169385 56169759 -143460391 + L1PB1 LINE L1 6486 6866 -1 759 148 0 9 chr5 56169784 56169892 -143460258 - FLAM_C SINE Alu -35 108 2 246 301 80 11 chr5 56169894 56170070 -143460080 + L1MC4 LINE L1 7744 7931 -111 1680 215 0 0 chr5 56170547 56170849 -143459301 - AluJb SINE Alu -8 304 3 2673 33 0 3 chr5 56171401 56171705 -143458445 - AluY SINE Alu -7 304 2 243 122 0 0 chr5 56172481 56172530 -143457620 + (TC)n Simple_repeat Simple_repeat 2 50 0 288 0 0 0 chr5 56172530 56172562 -143457588 + (CA)n Simple_repeat Simple_repeat 1 32 0 313 265 116 27 chr5 56172797 56172944 -143457206 - MIR SINE MIR -40 222 63 452 300 46 58 chr5 56173030 56173254 -143456896 - L2 LINE L2 0 3313 3091 1322 199 161 8 chr5 56173254 56173515 -143456635 + AluJo SINE Alu 1 301 -1 452 300 46 58 chr5 56173515 56173530 -143456620 - L2 LINE L2 -222 3091 3077 1285 267 72 72 chr5 56173554 56173593 -143456557 + MLT1K LTR MaLR 20 58 -530 1829 166 3 17 chr5 56173593 56173889 -143456261 + AluJo SINE Alu 1 292 -20 1285 267 72 72 chr5 56173889 56174373 -143455777 + MLT1K LTR MaLR 57 543 -45 2267 116 3 0 chr5 56174452 56174763 -143455387 - AluSq SINE Alu -1 312 1 440 336 14 32 chr5 56174785 56175002 -143455148 - L2 LINE L2 -217 3055 2843 1021 196 6 6 chr5 56175134 56175307 -143454843 - FAM SINE Alu -2 173 1 591 256 99 11 chr5 56175391 56175582 -143454568 + L1MC5 LINE L1 7260 7467 -494 2394 102 0 0 chr5 56175600 56175904 -143454246 + AluSg SINE Alu 1 304 -6 554 231 39 0 chr5 56175929 56176033 -143454117 + FLAM_A SINE Alu 1 108 -34 685 252 0 0 chr5 56176065 56176192 -143453958 - FLAM_C SINE Alu -6 127 1 289 217 75 28 chr5 56176221 56176327 -143453823 + L1MC5 LINE L1 7546 7656 -305 2271 91 14 0 chr5 56176329 56176741 -143453409 + AluSp SINE Alu 1 416 0 274 106 0 0 chr5 56176770 56176817 -143453333 + AluSc SINE Alu 252 298 -1 2086 128 0 0 chr5 56176846 56177128 -143453022 + AluSx SINE Alu 6 287 -25 270 299 0 0 chr5 56177183 56177250 -143452900 - L2 LINE L2 -1 3312 3246 1371 105 0 0 chr5 56177279 56177460 -143452690 + AluSc SINE Alu 127 307 -2 2199 103 14 0 chr5 56177475 56177780 -143452370 + AluSx SINE Alu 1 309 0 368 209 28 119 chr5 56177785 56177962 -143452188 + L1MC5 LINE L1 7661 7821 -140 932 216 0 0 chr5 56177964 56178135 -143452015 + FRAM SINE Alu 1 162 -14 2186 120 3 0 chr5 56178145 56178436 -143451714 + AluSx SINE Alu 1 292 -20 236 189 19 104 chr5 56178441 56178547 -143451603 + L1MC5 LINE L1 7832 7928 -33 27 29 0 0 chr5 56178547 56178581 -143451569 + AT_rich Low_complexity Low_complexity 1 34 0 194 343 71 20 chr5 56178766 56178865 -143451285 - L2 LINE L2 -660 2654 2551 849 175 0 7 chr5 56178878 56179021 -143451129 + FLAM_C SINE Alu 2 143 0 788 311 65 3 chr5 56179089 56179471 -143450679 - LTR33 LTR ERVL -115 406 1 233 249 73 119 chr5 56179511 56179688 -143450462 + MIR SINE MIR 84 252 -10 545 245 35 0 chr5 56179742 56179885 -143450265 - L1MA4 LINE L1 0 6300 6153 907 184 57 0 chr5 56179885 56180043 -143450107 - FRAM SINE Alu -9 167 1 434 177 48 40 chr5 56180047 56180171 -143449979 - L1MA4 LINE L1 -138 6162 6038 302 279 0 0 chr5 56180200 56180268 -143449882 + L2 LINE L2 3246 3313 0 * 391 302 163 19 chr5 56180246 56180461 -143449689 - MIR SINE MIR -10 252 7 828 234 81 9 chr5 56180830 56181052 -143449098 - MIR SINE MIR -8 254 17 2232 89 10 16 chr5 56181415 56181719 -143448431 + AluSg SINE Alu 1 302 -8 225 94 0 0 chr5 56181827 56181859 -143448291 + (CTTA)n Simple_repeat Simple_repeat 3 34 0 780 183 0 0 chr5 56181859 56181974 -143448176 - FLAM_A SINE Alu -18 115 1 1045 272 108 18 chr5 56182238 56182628 -143447522 - LTR16A LTR ERVL -7 443 19 295 250 0 0 chr5 56182889 56182957 -143447193 - MER2 DNA MER2_type -277 68 1 1794 147 118 23 chr5 56183053 56183399 -143446751 - MLT1B LTR MaLR -8 382 4 1961 127 10 27 chr5 56183788 56184088 -143446062 + AluSx SINE Alu 1 295 -17 1716 176 33 16 chr5 56184293 56184599 -143445551 - AluJb SINE Alu -1 311 1 1578 144 65 31 chr5 56185133 56185425 -143444725 + AluJo SINE Alu 1 302 -10 2299 112 0 13 chr5 56185752 56186066 -143444084 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr5 56186193 56186221 -143443929 + AT_rich Low_complexity Low_complexity 1 28 0 248 182 23 0 chr5 56186221 56186265 -143443885 - MER57A LTR ERV1 -64 339 295 1148 207 111 32 chr5 56186440 56186763 -143443387 - AluJo SINE Alu 0 345 1 305 136 0 0 chr5 56186785 56186829 -143443321 + MLT1D LTR MaLR 26 69 -436 1565 234 184 27 chr5 56186836 56187433 -143442717 - MER21B LTR ERV1 -75 788 98 344 117 127 44 chr5 56187426 56187530 -143442620 + AluS SINE Alu 230 300 0 * 2309 115 0 0 chr5 56187613 56187909 -143442241 + AluSx SINE Alu 1 296 -16 2562 65 3 0 chr5 56188512 56188819 -143441331 + AluY SINE Alu 1 308 -3 2305 105 13 0 chr5 56188832 56189167 -143440983 + AluSg SINE Alu 1 339 0 1816 156 22 0 chr5 56189342 56189641 -143440509 + AluSx SINE Alu 1 305 0 328 265 0 0 chr5 56189858 56189926 -143440224 - MER21B LTR ERV1 -767 96 29 1437 182 69 67 chr5 56189965 56190309 -143439841 + MLT1D LTR MaLR 90 439 -66 2352 90 7 3 chr5 56190309 56190610 -143439540 - AluY SINE Alu -8 303 2 1437 182 69 67 chr5 56190610 56190661 -143439489 + MLT1D LTR MaLR 439 488 -17 860 161 0 0 chr5 56190745 56190869 -143439281 - FLAM_C SINE Alu -19 124 1 1419 203 63 18 chr5 56190881 56191167 -143438983 - AluJo SINE Alu -13 299 1 2269 90 57 28 chr5 56191181 56191535 -143438615 - THE1B LTR MaLR 0 364 1 244 296 224 0 chr5 56191644 56191742 -143438408 - L2 LINE L2 0 3313 3194 2294 100 3 0 chr5 56191742 56192033 -143438117 - AluSc SINE Alu -2 307 16 376 194 43 22 chr5 56192111 56192221 -143437929 - L1MC5 LINE L1 0 8042 7831 2127 86 41 21 chr5 56192228 56192385 -143437765 - AluSp SINE Alu -14 299 132 2317 91 24 0 chr5 56192385 56192682 -143437468 - AluSc SINE Alu -5 304 1 2127 86 41 21 chr5 56192682 56192814 -143437336 - AluSp SINE Alu -181 132 4 296 278 111 14 chr5 56192814 56192958 -143437192 + Charlie8 DNA MER1_type 62 219 -2198 868 153 7 0 chr5 56193109 56193246 -143436904 - FLAM_C SINE Alu -4 139 2 1406 185 54 4 chr5 56193275 56193535 -143436615 - AluJb SINE Alu -27 285 13 2290 91 0 0 chr5 56193561 56193847 -143436303 - AluSx SINE Alu -26 286 1 215 31 31 0 chr5 56194205 56194237 -143435913 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1864 144 0 4 chr5 56194241 56194512 -143435638 - AluSc SINE Alu -31 278 9 658 213 39 0 chr5 56195142 56195269 -143434881 + FLAM_C SINE Alu 2 133 0 582 281 12 6 chr5 56195611 56195782 -143434368 + MIR SINE MIR 1 172 -90 305 195 0 0 chr5 56195799 56195863 -143434287 - MLT1F LTR MaLR -8 534 481 2355 92 0 35 chr5 56195924 56196241 -143433909 - AluSq SINE Alu -7 306 1 2193 103 0 10 chr5 56196241 56196542 -143433608 - AluSx SINE Alu -14 298 1 2228 117 0 0 chr5 56196630 56196929 -143433221 + AluSx SINE Alu 1 299 -13 2117 104 3 38 chr5 56196985 56197302 -143432848 + AluSp SINE Alu 1 306 -7 2387 104 3 0 chr5 56197308 56197615 -143432535 + AluSx SINE Alu 1 308 -4 1773 168 3 26 chr5 56197933 56198237 -143431913 - AluJo SINE Alu -15 297 1 21 0 0 0 chr5 56198346 56198367 -143431783 + AT_rich Low_complexity Low_complexity 1 21 0 2234 123 3 3 chr5 56198492 56198802 -143431348 - AluSx SINE Alu -2 310 1 184 54 71 36 chr5 56198838 56198894 -143431256 + T-rich Low_complexity Low_complexity 2 59 0 1948 147 0 10 chr5 56199070 56199376 -143430774 + AluSq SINE Alu 1 303 -10 2180 132 3 0 chr5 56199458 56199762 -143430388 - AluSq SINE Alu -8 305 1 1258 168 0 47 chr5 56199949 56200181 -143429969 - AluJo SINE Alu -91 221 1 755 203 7 14 chr5 56200301 56200449 -143429701 - AluJb SINE Alu -84 228 82 860 183 0 0 chr5 56200485 56200622 -143429528 - AluJb SINE Alu -19 293 157 357 316 32 16 chr5 56200776 56201029 -143429121 - L1MC/D LINE L1 -2289 5519 5263 2001 134 10 0 chr5 56201145 56201467 -143428683 - AluSq SINE Alu 0 313 1 664 162 0 8 chr5 56201734 56201851 -143428299 + FLAM_C SINE Alu 14 129 -14 234 0 0 0 chr5 56202004 56202030 -143428120 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2252 95 0 0 chr5 56202032 56202315 -143427835 - AluSq SINE Alu -30 283 1 2288 59 76 3 chr5 56203001 56203291 -143426859 + AluY SINE Alu 1 311 0 2107 123 7 0 chr5 56203343 56203636 -143426514 + AluSx SINE Alu 1 295 -17 1827 157 3 26 chr5 56203747 56204052 -143426098 + AluJb SINE Alu 3 300 -12 1975 137 24 7 chr5 56204063 56204356 -143425794 + AluSx SINE Alu 1 298 -14 200 208 0 21 chr5 56204562 56204610 -143425540 + GA-rich Low_complexity Low_complexity 2 48 0 1948 92 48 7 chr5 56205071 56205363 -143424787 - AluSc SINE Alu -5 304 1 521 216 0 0 chr5 56205608 56205705 -143424445 - AluJ SINE Alu -96 216 120 800 93 7 120 chr5 56205721 56205871 -143424279 - AluJ SINE Alu -169 133 1 33 25 0 0 chr5 56206133 56206173 -143423977 + AT_rich Low_complexity Low_complexity 1 40 0 1861 153 3 30 chr5 56206175 56206475 -143423675 + AluJo SINE Alu 1 292 -20 1185 100 12 0 chr5 56206501 56206661 -143423489 - AluSg/x SINE Alu -16 296 135 2265 98 0 16 chr5 56206662 56206977 -143423173 - AluSq SINE Alu -3 310 1 12858 167 71 66 chr5 56206977 56207572 -143422578 - L1 LINE L1 -1154 6411 5821 2133 102 7 11 chr5 56207572 56207884 -143422266 - AluSx SINE Alu 0 311 1 12858 167 71 66 chr5 56207884 56208135 -143422015 - L1 LINE L1 -1744 5821 5573 1774 179 30 0 chr5 56208135 56208315 -143421835 - AluJb SINE Alu 0 312 118 297 0 0 0 chr5 56208315 56208348 -143421802 + (TG)n Simple_repeat Simple_repeat 2 34 0 1774 179 30 0 chr5 56208348 56208469 -143421681 - AluJb SINE Alu -194 118 2 12858 167 71 66 chr5 56208469 56209396 -143420754 - L1 LINE L1 -1992 5573 4653 2296 116 0 0 chr5 56209396 56209699 -143420451 - AluSg SINE Alu -7 303 1 12858 167 71 66 chr5 56209699 56209767 -143420383 - L1 LINE L1 -2912 4653 4587 2249 105 0 3 chr5 56209767 56210062 -143420088 + AluSq SINE Alu 1 294 -19 12858 167 71 66 chr5 56210062 56210240 -143419910 - L1 LINE L1 -2978 4587 4411 2042 109 15 67 chr5 56210240 56210569 -143419581 - AluSx SINE Alu 0 312 1 12858 167 71 66 chr5 56210569 56211856 -143418294 - L1 LINE L1 -3154 4411 3132 1946 150 0 7 chr5 56211856 56212149 -143418001 - AluJb SINE Alu -21 291 1 12858 167 71 66 chr5 56212149 56212165 -143417985 - L1 LINE L1 -4433 3132 3118 2265 114 3 0 chr5 56212165 56212463 -143417687 - AluSp SINE Alu -14 299 1 12858 167 71 66 chr5 56212463 56212485 -143417665 - L1 LINE L1 -4447 3118 3098 1759 151 29 7 chr5 56212485 56212764 -143417386 - AluSx SINE Alu -27 285 1 12858 167 71 66 chr5 56212764 56212906 -143417244 - L1 LINE L1 -4467 3098 2958 2306 96 0 16 chr5 56212906 56213218 -143416932 - AluSg SINE Alu -3 307 1 12858 167 71 66 chr5 56213218 56213679 -143416471 - L1 LINE L1 -4607 2958 2501 1692 118 118 31 chr5 56213679 56213967 -143416183 - AluSq SINE Alu 0 313 1 12858 167 71 66 chr5 56213967 56213997 -143416153 - L1 LINE L1 -5064 2501 2473 2453 89 0 0 chr5 56213997 56214300 -143415850 - AluSp SINE Alu -10 303 1 12858 167 71 66 chr5 56214300 56214577 -143415573 - L1 LINE L1 -5092 2473 2199 2019 110 58 3 chr5 56214577 56214869 -143415281 + AluSx SINE Alu 1 308 -4 12858 167 71 66 chr5 56214869 56215356 -143414794 - L1 LINE L1 -5366 2199 1716 2215 141 98 28 chr5 56215356 56215686 -143414464 + MSTA LTR MaLR 3 367 -61 2043 147 7 0 chr5 56215686 56215993 -143414157 + AluSg SINE Alu 2 310 0 2215 141 98 28 chr5 56215993 56216060 -143414090 + MSTA LTR MaLR 367 428 0 12858 167 71 66 chr5 56216060 56216153 -143413997 - L1 LINE L1 -5849 1716 1625 1977 146 17 0 chr5 56216153 56216455 -143413695 + AluSx SINE Alu 1 307 -5 451 104 0 0 chr5 56216455 56216522 -143413628 + MSTA LTR MaLR 362 428 0 12858 167 71 66 chr5 56216522 56216610 -143413540 - L1 LINE L1 -5940 1625 1539 2014 123 11 0 chr5 56216610 56216887 -143413263 + AluSx SINE Alu 1 280 -32 230 0 33 0 chr5 56216887 56216917 -143413233 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 12858 167 71 66 chr5 56216917 56217571 -143412579 - L1 LINE L1 -6026 1539 1076 1808 168 0 38 chr5 56217571 56217886 -143412264 - AluJb SINE Alu -9 303 1 12858 167 71 66 chr5 56217886 56218632 -143411518 - L1 LINE L1 -6489 1076 336 506 200 240 20 chr5 56218642 56218698 -143411452 + MER45B DNA AcHobo 849 891 -690 2166 126 0 19 chr5 56218698 56218983 -143411167 + AluSx SINE Alu 1 281 -31 236 30 30 0 chr5 56218983 56219016 -143411134 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 2166 126 0 19 chr5 56219016 56219048 -143411102 + AluSx SINE Alu 281 312 0 506 200 240 20 chr5 56219048 56219141 -143411009 + MER45B DNA AcHobo 891 1031 -9 755 323 88 17 chr5 56219557 56219851 -143410299 + MLT1G1 LTR MaLR 281 595 0 605 272 31 31 chr5 56219927 56220118 -143410032 + MIR SINE MIR 8 198 -64 1392 107 10 5 chr5 56220121 56220317 -143409833 + AluSg SINE Alu 1 197 -113 476 62 47 0 chr5 56220318 56220382 -143409768 + AluY SINE Alu 66 132 -179 376 120 18 0 chr5 56220699 56220769 -143409381 - Alu SINE Alu -248 53 1 21 0 0 0 chr5 56220803 56220824 -143409326 + AT_rich Low_complexity Low_complexity 1 21 0 2210 103 3 35 chr5 56220826 56221137 -143409013 + AluSq SINE Alu 1 301 -12 2124 90 33 37 chr5 56221138 56221438 -143408712 + AluSx SINE Alu 1 299 -13 33 43 0 0 chr5 56221555 56221602 -143408548 + AT_rich Low_complexity Low_complexity 1 47 0 1294 148 98 56 chr5 56221766 56221874 -143408276 - LTR54 LTR ERV1 0 510 408 2241 98 0 0 chr5 56221874 56222161 -143407989 - AluSg SINE Alu -14 296 10 1294 148 98 56 chr5 56222161 56222478 -143407672 - LTR54 LTR ERV1 -102 408 1 383 182 76 0 chr5 56222794 56222860 -143407290 + L1M1 LINE L1 15 85 -7480 4368 170 3 19 chr5 56222862 56223563 -143406587 + L1M1 LINE L1 1297 1986 -5579 667 163 0 6 chr5 56223566 56223824 -143406326 + AluJ SINE Alu 3 309 -3 2412 100 3 0 chr5 56223827 56224136 -143406014 + AluSp SINE Alu 3 312 -1 212 302 0 16 chr5 56224156 56224219 -143405931 - L2 LINE L2 -2075 1239 1178 524 284 43 0 chr5 56224625 56224787 -143405363 + MER20B DNA MER1_type 243 411 -372 1268 115 0 0 chr5 56224796 56224961 -143405189 + AluSx SINE Alu 44 208 -104 2985 93 181 26 chr5 56224963 56225492 -143404658 - LTR10E LTR ERV1 -21 612 2 667 134 0 0 chr5 56225492 56225589 -143404561 + AluSp/q SINE Alu 204 300 -13 511 256 110 0 chr5 56225616 56225780 -143404370 + MER20B DNA MER1_type 441 622 -161 2149 128 3 0 chr5 56225850 56226140 -143404010 + AluSx SINE Alu 1 291 -21 814 197 0 0 chr5 56226722 56226859 -143403291 - FAM SINE Alu -18 167 31 2095 116 10 7 chr5 56226928 56227231 -143402919 + AluSc SINE Alu 1 304 -5 2464 32 0 0 chr5 56227607 56227941 -143402209 + AluY SINE Alu 1 334 0 237 345 0 0 chr5 56228114 56228201 -143401949 + L2 LINE L2 3227 3313 0 456 289 138 52 chr5 56228839 56229202 -143400948 - MLT1K LTR MaLR -14 574 181 2315 110 0 3 chr5 56229202 56229512 -143400638 - AluSg SINE Alu -1 309 1 2543 53 0 7 chr5 56229530 56229833 -143400317 - AluY SINE Alu -10 301 1 226 282 58 64 chr5 56229835 56229991 -143400159 + L2 LINE L2 2322 2476 -838 1940 120 67 0 chr5 56230160 56230444 -143399706 - AluSq SINE Alu -9 304 2 781 143 16 0 chr5 56230449 56230575 -143399575 - FLAM_C SINE Alu -4 129 2 260 318 73 21 chr5 56230635 56230827 -143399323 - L2 LINE L2 -189 3083 2882 440 320 17 12 chr5 56230831 56231003 -143399147 + L2 LINE L2 2583 2755 -559 2151 125 7 0 chr5 56231137 56231440 -143398710 - AluSx SINE Alu -7 305 1 285 179 179 0 chr5 56231621 56231688 -143398462 - L2 LINE L2 0 3313 3235 220 233 50 17 chr5 56231821 56231881 -143398269 - MIR SINE MIR -195 67 6 584 114 0 0 chr5 56231979 56232058 -143398092 + AluJb SINE Alu 58 136 -176 271 157 0 0 chr5 56232062 56232113 -143398037 + Alu SINE Alu 252 302 0 4116 28 0 0 chr5 56232171 56232638 -143397512 + L1PA5 LINE L1 5426 5892 -262 1764 134 0 59 chr5 56232638 56232944 -143397206 - AluJb SINE Alu -22 290 3 842 127 0 0 chr5 56233093 56233211 -143396939 - FLAM_C SINE Alu -15 118 1 742 149 44 0 chr5 56234174 56234288 -143395862 + FLAM_C SINE Alu 3 121 -22 328 53 0 35 chr5 56234288 56234345 -143395805 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 584 203 28 42 chr5 56234395 56234526 -143395624 + FLAM_C SINE Alu 2 132 -180 1856 166 3 10 chr5 56234526 56234839 -143395311 + AluJb SINE Alu 1 311 -1 584 203 28 42 chr5 56234839 56234850 -143395300 + FLAM_C SINE Alu 132 142 -170 2372 82 0 22 chr5 56234900 56235216 -143394934 - AluSg SINE Alu -1 309 1 2101 122 7 0 chr5 56235313 56235601 -143394549 + AluSx SINE Alu 1 290 -22 579 232 116 56 chr5 56235629 56235780 -143394370 - L1ME4a LINE L1 -78 6043 5902 2426 100 0 0 chr5 56235780 56236090 -143394060 - AluSg SINE Alu 0 310 1 579 232 116 56 chr5 56236090 56236240 -143393910 - L1ME4a LINE L1 -219 5902 5724 758 80 0 0 chr5 56236271 56236371 -143393779 - HY3 scRNA scRNA -1 100 1 2118 100 0 58 chr5 56236453 56236629 -143393521 - AluSg SINE Alu -17 293 141 2411 89 0 3 chr5 56236629 56236942 -143393208 - AluSq SINE Alu -1 312 1 2118 100 0 58 chr5 56236942 56237076 -143393074 - AluSg SINE Alu -169 141 1 22 0 0 0 chr5 56237079 56237101 -143393049 + AT_rich Low_complexity Low_complexity 1 22 0 2242 103 7 3 chr5 56237248 56237549 -143392601 - AluSq SINE Alu -11 302 1 427 161 0 37 chr5 56237730 56237742 -143392408 - AluSg/x SINE Alu -166 144 133 1587 103 32 149 chr5 56237742 56237953 -143392197 - AluYb8 SINE Alu 0 308 152 1866 112 4 4 chr5 56237953 56238212 -143391938 - AluSq SINE Alu -54 259 1 1587 103 32 149 chr5 56238212 56238348 -143391802 - AluYb8 SINE Alu -156 152 2 427 161 0 37 chr5 56238348 56238416 -143391734 - AluSg/x SINE Alu -177 133 67 1267 84 0 114 chr5 56238416 56238508 -143391642 - AluSp SINE Alu -110 203 151 2559 49 3 10 chr5 56238508 56238815 -143391335 - AluY SINE Alu -6 305 1 1267 84 0 114 chr5 56238815 56238949 -143391201 - AluSp SINE Alu -162 151 3 1743 148 54 4 chr5 56238957 56239235 -143390915 - AluSx SINE Alu -20 292 1 221 259 12 37 chr5 56241104 56241185 -143388965 + CT-rich Low_complexity Low_complexity 3 81 0 1963 97 0 85 chr5 56244645 56244964 -143385186 - AluSq SINE Alu -21 292 1 2105 104 10 17 chr5 56245411 56245709 -143384441 - AluSx SINE Alu -16 296 1 315 323 108 32 chr5 56246125 56246311 -143383839 - MIR SINE MIR -60 202 3 806 208 38 0 chr5 56246527 56246686 -143383464 - AluJo SINE Alu -27 285 121 1809 145 13 19 chr5 56246749 56247060 -143383090 - AluSq SINE Alu -4 309 1 1939 132 10 17 chr5 56247288 56247583 -143382567 - AluSq SINE Alu -20 293 1 1872 109 0 16 chr5 56247901 56248157 -143381993 - AluSx SINE Alu -12 300 49 1784 177 0 3 chr5 56248215 56248503 -143381647 + AluJo SINE Alu 1 287 -25 339 108 108 15 chr5 56248550 56248615 -143381535 + AluJ/FRAM SINE Alu 229 299 -3 561 202 0 0 chr5 56248656 56248755 -143381395 + AluJ/FLAM SINE Alu 2 100 -212 586 133 0 0 chr5 56248802 56248885 -143381265 - AluS SINE Alu -229 84 2 2052 126 11 0 chr5 56249261 56249547 -143380603 - AluSq SINE Alu -24 289 1 2361 87 0 0 chr5 56249547 56249834 -143380316 - AluSg SINE Alu -23 287 1 1900 170 3 0 chr5 56249846 56250146 -143380004 - AluJb SINE Alu -11 301 1 2266 104 0 7 chr5 56250248 56250546 -143379604 + AluSp SINE Alu 2 297 -16 749 239 11 39 chr5 56250642 56250822 -143379328 + AluJo SINE Alu 118 292 -20 1141 179 5 19 chr5 56250929 56251141 -143379009 - AluJb SINE Alu -6 306 98 1946 134 0 0 chr5 56251141 56251409 -143378741 + AluSx SINE Alu 29 296 -16 1975 170 67 10 chr5 56251441 56251842 -143378308 - MSTB LTR MaLR -2 424 1 1436 206 160 59 chr5 56251861 56252422 -143377728 - L1ME1 LINE L1 -74 6092 5589 2108 119 3 26 chr5 56252422 56252732 -143377418 - AluSq SINE Alu -10 303 1 1436 206 160 59 chr5 56252732 56252880 -143377270 - L1ME1 LINE L1 -577 5589 5457 1258 147 181 12 chr5 56252880 56253139 -143377011 + AluJb SINE Alu 1 303 -9 1436 206 160 59 chr5 56253139 56253267 -143376883 - L1ME1 LINE L1 -709 5457 5159 1398 208 39 11 chr5 56253288 56253567 -143376583 + AluJo SINE Alu 11 297 -15 595 193 111 6 chr5 56253570 56253741 -143376409 - L1ME1 LINE L1 -1015 5131 4943 1432 207 14 14 chr5 56253755 56254030 -143376120 - AluJo SINE Alu -33 279 5 422 208 108 17 chr5 56254041 56254161 -143375989 - L1ME1 LINE L1 -1198 4948 4818 372 77 0 0 chr5 56254167 56254219 -143375931 + (TG)n Simple_repeat Simple_repeat 2 53 0 181 271 135 100 chr5 56254731 56254901 -143375249 + MIR SINE MIR 41 216 -46 286 107 36 0 chr5 56255050 56255106 -143375044 + (TA)n Simple_repeat Simple_repeat 2 59 0 2108 138 0 3 chr5 56255124 56255420 -143374730 + AluSx SINE Alu 1 295 -17 919 311 174 12 chr5 56255480 56255622 -143374528 + L2 LINE L2 2199 2317 -996 1844 145 14 27 chr5 56255622 56255919 -143374231 + AluSg SINE Alu 1 293 -17 919 311 174 12 chr5 56255919 56256140 -143374010 + L2 LINE L2 2317 2501 -812 213 65 0 0 chr5 56256140 56256171 -143373979 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 1595 123 123 27 chr5 56256171 56256291 -143373859 - AluSq SINE Alu -28 285 178 1892 144 10 7 chr5 56256291 56256582 -143373568 - AluSx SINE Alu -20 292 1 1595 123 123 27 chr5 56256582 56256721 -143373429 - AluSq SINE Alu -135 178 1 919 311 174 12 chr5 56256721 56257273 -143372877 + L2 LINE L2 2500 3255 -58 2357 95 3 10 chr5 56257466 56257771 -143372379 + AluSx SINE Alu 1 303 -9 1579 124 3 182 chr5 56257859 56258239 -143371911 - AluJb SINE Alu 0 312 1 1700 150 26 33 chr5 56258250 56258557 -143371593 - AluSx SINE Alu -7 305 1 2431 83 3 0 chr5 56258722 56259022 -143371128 - AluSc SINE Alu -8 301 1 2474 79 3 0 chr5 56259635 56259938 -143370212 + AluSp SINE Alu 1 304 -9 2156 117 3 0 chr5 56260198 56260489 -143369661 + AluSq SINE Alu 1 292 -21 1975 151 7 3 chr5 56260496 56260800 -143369350 + AluJb SINE Alu 1 305 -7 328 254 254 37 chr5 56261172 56261522 -143368628 - L1MC4a LINE L1 -1870 5938 5513 3435 161 62 6 chr5 56261560 56262233 -143367917 - L1MA4 LINE L1 -2 6298 5588 1423 198 23 4 chr5 56262328 56262586 -143367564 - AluJb SINE Alu -15 297 35 1991 110 76 14 chr5 56262880 56263170 -143366980 + AluSx SINE Alu 1 308 -4 641 195 8 16 chr5 56263343 56263466 -143366684 - FLAM_C SINE Alu -20 123 2 195 42 0 0 chr5 56263744 56263768 -143366382 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1004 145 0 30 chr5 56263771 56263937 -143366213 - AluJb SINE Alu -30 282 122 2101 126 3 0 chr5 56263958 56264244 -143365906 - AluSx SINE Alu -25 287 1 524 139 23 0 chr5 56264246 56264332 -143365818 - AluSq/x SINE Alu -180 132 45 21 36 0 0 chr5 56264346 56264374 -143365776 + AT_rich Low_complexity Low_complexity 1 28 0 2133 102 13 10 chr5 56264518 56264822 -143365328 - AluSx SINE Alu -7 305 1 277 253 89 48 chr5 56264956 56265102 -143365048 - HAL1 LINE L1 -1589 918 767 1522 132 23 0 chr5 56265734 56265954 -143364196 + AluSx SINE Alu 1 225 -87 1244 14 0 0 chr5 56266719 56266857 -143363293 - L1PA5 LINE L1 -11 6143 6006 457 127 113 0 chr5 56267099 56267170 -143362980 - AluS SINE Alu -232 80 2 252 0 0 0 chr5 56267185 56267213 -143362937 + (T)n Simple_repeat Simple_repeat 1 28 0 238 240 0 0 chr5 56267263 56267313 -143362837 + (CCCCG)n Simple_repeat Simple_repeat 5 54 0 187 103 51 0 chr5 56267316 56267355 -143362795 + CT-rich Low_complexity Low_complexity 4 44 0 2195 114 0 3 chr5 56267524 56267830 -143362320 - AluSg SINE Alu -5 305 1 1950 113 11 0 chr5 56267875 56268141 -143362009 - AluY SINE Alu -42 269 1 1127 110 0 0 chr5 56268141 56268287 -143361863 - AluSq/x SINE Alu -167 146 1 432 198 25 12 chr5 56268381 56268462 -143361688 - FRAM/FAM SINE Alu -102 74 1 379 226 0 65 chr5 56268468 56268561 -143361589 - LTR8A LTR ERV1 -56 671 585 376 198 31 27 chr5 56268544 56268650 -143361500 - AluSq/x SINE Alu -166 137 71 * 190 315 27 54 chr5 56269013 56269124 -143361026 + MIR SINE MIR 6 113 -149 1633 184 31 7 chr5 56269160 56269448 -143360702 - AluJb SINE Alu -17 295 1 1956 143 3 3 chr5 56269457 56269751 -143360399 - AluSq SINE Alu -18 295 2 1816 142 3 33 chr5 56270522 56270824 -143359326 + AluSx SINE Alu 6 298 -14 194 62 31 0 chr5 56271403 56271435 -143358715 + (TTTTG)n Simple_repeat Simple_repeat 1 33 0 1631 178 0 7 chr5 56271439 56271715 -143358435 - AluJb SINE Alu -38 274 1 660 234 190 21 chr5 56271735 56272025 -143358125 - L1MC4a LINE L1 -298 7510 7172 3819 177 90 30 chr5 56272114 56272910 -143357240 - L1MB5 LINE L1 -8 6166 5419 1638 194 3 25 chr5 56272910 56273229 -143356921 - AluJb SINE Alu 0 312 1 3819 177 90 30 chr5 56273229 56273558 -143356592 - L1MB5 LINE L1 -755 5419 5111 1753 140 90 0 chr5 56273558 56273837 -143356313 - AluSx SINE Alu -8 304 1 3819 177 90 30 chr5 56273837 56274030 -143356120 - L1MB5 LINE L1 -1063 5111 4753 1291 193 16 12 chr5 56274030 56274273 -143355877 + AluJo SINE Alu 45 288 -24 363 58 77 0 chr5 56274278 56274330 -143355820 + L1M LINE L1 5319 5374 -806 466 245 25 19 chr5 56274332 56274491 -143355659 - L1MB5 LINE L1 -1387 4759 4600 4014 124 46 83 chr5 56274520 56275327 -143354823 - LTR1 LTR ERV1 -8 777 1 294 175 0 16 chr5 56275354 56275417 -143354733 - LTR1 LTR ERV1 -723 62 1 1722 172 4 4 chr5 56275417 56275696 -143354454 - AluJb SINE Alu -33 279 1 1239 226 40 49 chr5 56275701 56275807 -143354343 - L1MB5 LINE L1 -1537 4609 4504 2218 116 7 0 chr5 56275807 56276117 -143354033 - AluSx SINE Alu 0 312 1 1239 226 40 49 chr5 56276117 56276461 -143353689 - L1MB5 LINE L1 -1642 4504 4163 694 191 8 0 chr5 56276476 56276607 -143353543 - FAM SINE Alu -36 149 18 2003 196 16 9 chr5 56276628 56277071 -143353079 - L1MB5 LINE L1 -1974 4172 3727 2002 173 34 24 chr5 56277808 56278189 -143351961 - MLT1B LTR MaLR -5 385 1 1614 176 17 7 chr5 56278358 56278647 -143351503 - AluJo SINE Alu -20 292 1 1896 73 55 15 chr5 56278765 56279037 -143351113 - AluSp SINE Alu -30 283 1 1769 123 31 4 chr5 56279110 56279370 -143350780 - AluSg SINE Alu -20 290 24 2138 115 0 37 chr5 56279824 56280145 -143350005 - AluSq SINE Alu -2 311 3 299 246 126 86 chr5 56280152 56280217 -143349933 - L1MC5 LINE L1 -177 7784 7723 2133 114 13 0 chr5 56280217 56280516 -143349634 - AluSq SINE Alu -10 303 1 299 246 126 86 chr5 56280516 56280625 -143349525 - L1MC5 LINE L1 -238 7723 7603 266 184 127 108 chr5 56280751 56280909 -143349241 - L1MC5 LINE L1 -563 7398 7238 306 211 157 14 chr5 56280920 56280936 -143349214 - L1MA10 LINE L1 -2 6332 6317 711 202 188 5 chr5 56280936 56281154 -143348996 - L1ME1 LINE L1 -7 6159 5902 2123 106 4 0 chr5 56281469 56281744 -143348406 + AluSp SINE Alu 1 276 -37 185 0 0 39 chr5 56281748 56281774 -143348376 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1891 158 0 20 chr5 56281829 56282127 -143348023 - AluSx SINE Alu -20 292 1 1783 176 166 30 chr5 56282490 56282983 -143347167 - L1M4b LINE L1 -5667 1192 633 1373 266 162 31 chr5 56283016 56283559 -143346591 - L1M4b LINE L1 -5992 867 169 470 153 18 36 chr5 56283562 56283605 -143346545 + L1M4b LINE L1 60 102 -6757 1499 149 138 4 chr5 56283605 56283873 -143346277 + AluJb SINE Alu 1 304 -8 470 153 18 36 chr5 56283873 56283940 -143346210 + L1M4b LINE L1 102 168 -6691 2263 104 7 0 chr5 56284458 56284766 -143345384 + AluSp SINE Alu 3 312 -1 821 144 0 16 chr5 56284901 56285026 -143345124 + AluJb SINE Alu 1 123 -189 1506 242 114 21 chr5 56285232 56285707 -143344443 - MER21B LTR ERV1 -3 860 342 251 149 64 0 chr5 56285717 56285764 -143344386 - MER21B LTR ERV1 -651 212 163 983 135 4 70 chr5 56285874 56286103 -143344047 - AluJb SINE Alu -97 215 2 846 127 0 0 chr5 56286264 56286382 -143343768 - FLAM_C SINE Alu -15 118 1 747 149 44 0 chr5 56287345 56287459 -143342691 + FLAM_C SINE Alu 3 121 -22 328 53 0 35 chr5 56287459 56287516 -143342634 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 906 206 28 19 chr5 56287566 56287780 -143342370 + AluJo SINE Alu 2 217 -95 2311 118 0 3 chr5 56288565 56288878 -143341272 + AluSx SINE Alu 1 312 0 196 146 21 21 chr5 56289095 56289143 -143341007 + CT-rich Low_complexity Low_complexity 3 50 0 1839 133 10 42 chr5 56289147 56289456 -143340694 - AluSx SINE Alu -13 299 1 327 141 0 0 chr5 56289526 56289590 -143340560 + (TCCCG)n Simple_repeat Simple_repeat 2 65 0 1916 76 4 16 chr5 56289598 56289849 -143340301 - AluSp SINE Alu -65 248 1 1358 126 5 5 chr5 56290996 56291194 -143338956 - AluSq SINE Alu -109 204 7 202 351 99 9 chr5 56291361 56291472 -143338678 - L2 LINE L2 0 3313 3193 706 182 84 49 chr5 56291666 56291809 -143338341 - AluJo SINE Alu -18 284 137 578 182 0 45 chr5 56291809 56291893 -143338257 - AluJo SINE Alu -207 105 26 4082 81 18 36 chr5 56291893 56292495 -143337655 + LTR10C LTR ERV1 1 591 0 578 182 0 45 chr5 56292495 56292520 -143337630 - AluJo SINE Alu -286 26 1 707 256 119 4 chr5 56292976 56293203 -143336947 + MLT1E3 LTR MaLR 323 575 -49 25 0 0 0 chr5 56293205 56293230 -143336920 + AT_rich Low_complexity Low_complexity 1 25 0 2135 120 3 0 chr5 56293232 56293523 -143336627 + AluSx SINE Alu 3 294 -18 487 60 0 0 chr5 56293636 56293703 -143336447 - MER41A LTR ERV1 -88 466 400 832 153 187 25 chr5 56293856 56294059 -143336091 - MER46A DNA MER2_type 0 236 1 26 0 0 0 chr5 56296034 56296060 -143334090 + AT_rich Low_complexity Low_complexity 1 26 0 2187 79 32 0 chr5 56296487 56296788 -143333362 + AluSp SINE Alu 1 310 0 718 164 16 8 chr5 56297405 56297533 -143332617 + FRAM SINE Alu 32 160 -16 188 325 110 73 chr5 56297807 56297972 -143332178 + MIR SINE MIR 7 185 -77 2007 75 82 28 chr5 56297972 56298254 -143331896 + AluSp SINE Alu 1 297 -16 188 325 110 73 chr5 56298254 56298334 -143331816 + MIR SINE MIR 185 261 -1 808 170 7 0 chr5 56298725 56298860 -143331290 + FLAM_C SINE Alu 1 136 -7 21 0 0 0 chr5 56299229 56299250 -143330900 + AT_rich Low_complexity Low_complexity 1 21 0 312 340 11 11 chr5 56299662 56299756 -143330394 - MIR SINE MIR -149 113 20 570 177 0 0 chr5 56299788 56299884 -143330266 - AluJ SINE Alu -25 287 192 859 175 0 7 chr5 56299884 56300027 -143330123 - AluJ SINE Alu -170 142 1 2115 109 0 3 chr5 56300046 56300330 -143329820 - AluSg SINE Alu -27 283 1 2347 96 3 0 chr5 56300343 56300646 -143329504 - AluSg SINE Alu -6 304 1 1776 164 20 24 chr5 56300977 56301270 -143328880 - AluJo SINE Alu -20 292 1 22 0 0 0 chr5 56301293 56301315 -143328835 + AT_rich Low_complexity Low_complexity 1 22 0 1344 81 0 6 chr5 56302009 56302181 -143327969 - AluSg SINE Alu -6 304 134 686 156 19 50 chr5 56302283 56302443 -143327707 - AluSg SINE Alu -155 155 1 1546 176 22 4 chr5 56304829 56305096 -143325054 + AluJb SINE Alu 15 286 -26 1392 193 25 4 chr5 56305173 56305447 -143324703 - AluJo SINE Alu -30 282 3 2608 10 0 23 chr5 56305827 56306130 -143324020 - AluYa5 SINE Alu -4 307 12 21 36 0 0 chr5 56306433 56306461 -143323689 + AT_rich Low_complexity Low_complexity 1 28 0 211 310 7 35 chr5 56307216 56307361 -143322789 + GA-rich Low_complexity Low_complexity 2 142 0 402 243 5 54 chr5 56307470 56307655 -143322495 + A-rich Low_complexity Low_complexity 3 178 0 224 274 29 23 chr5 56307589 56307764 -143322386 + (CAAA)n Simple_repeat Simple_repeat 2 177 0 * 8321 189 22 21 chr5 56307864 56309343 -143320807 - L1M1 LINE L1 -5864 1701 218 2265 98 93 42 chr5 56309343 56309563 -143320587 - MSTA LTR MaLR 0 428 221 2315 95 7 0 chr5 56309563 56309859 -143320291 - AluSp SINE Alu -13 300 3 2265 98 93 42 chr5 56309859 56310045 -143320105 - MSTA LTR MaLR -207 221 1 8321 189 22 21 chr5 56310045 56310240 -143319910 - L1M1 LINE L1 -7347 218 25 412 165 189 0 chr5 56310241 56310368 -143319782 + MER69 DNA AcHobo 2361 2511 -15 2319 155 25 65 chr5 56310398 56310920 -143319230 - MLT1D LTR MaLR -2 503 3 307 200 0 0 chr5 56311130 56311190 -143318960 + MLT1K LTR MaLR 529 588 0 392 287 127 0 chr5 56311195 56311345 -143318805 - MIR SINE MIR -12 250 82 1169 195 109 7 chr5 56311393 56311695 -143318455 - MER2 DNA MER2_type -9 336 4 576 279 82 12 chr5 56311710 56311954 -143318196 - L1ME LINE L1 -5703 367 107 817 148 7 49 chr5 56312291 56312433 -143317717 - AluJo SINE Alu -176 136 1 206 105 26 0 chr5 56312546 56312584 -143317566 + T-rich Low_complexity Low_complexity 2 40 0 192 100 40 40 chr5 56312923 56312973 -143317177 + C-rich Low_complexity Low_complexity 6 55 0 1571 167 3 90 chr5 56312974 56313286 -143316864 - AluSx SINE Alu -27 285 1 1938 115 44 30 chr5 56313531 56313827 -143316323 - AluSq SINE Alu -13 300 1 2278 189 101 75 chr5 56314198 56315108 -143315042 - L1MB8 LINE L1 -3 6175 5290 207 0 0 0 chr5 56315108 56315131 -143315019 + (CCCCCA)n Simple_repeat Simple_repeat 6 28 0 403 174 294 0 chr5 56315138 56315230 -143314920 - FLAM_A SINE Alu -14 119 1 2278 189 101 75 chr5 56315230 56315304 -143314846 - L1MB8 LINE L1 -893 5285 5110 1545 166 3 33 chr5 56315384 56315685 -143314465 - AluJb SINE Alu -20 292 1 1962 133 17 0 chr5 56315708 56316001 -143314149 - AluSx SINE Alu -14 298 1 448 222 111 9 chr5 56316510 56316618 -143313532 + L2 LINE L2 3193 3311 -2 24 85 0 0 chr5 56316677 56316736 -143313414 + AT_rich Low_complexity Low_complexity 1 59 0 610 164 0 18 chr5 56316806 56316916 -143313234 - AluJb SINE Alu -204 108 1 1632 186 65 0 chr5 56316921 56317211 -143312939 - AluJo SINE Alu -3 309 1 2157 120 7 7 chr5 56317405 56317704 -143312446 + AluSx SINE Alu 1 299 -13 257 173 25 25 chr5 56318177 56318258 -143311892 + CT-rich Low_complexity Low_complexity 3 83 0 243 313 62 17 chr5 56318267 56318443 -143311707 - L1MC/D LINE L1 -2089 5719 5536 1983 150 7 3 chr5 56318970 56319277 -143310873 + AluSx SINE Alu 1 308 -4 511 165 0 0 chr5 56319402 56319487 -143310663 + FRAM SINE Alu 71 155 -21 74 0 0 32 chr5 56319487 56319510 -143310640 + AT_rich Low_complexity Low_complexity 1 23 -67 2311 67 0 0 chr5 56319510 56319815 -143310335 + AluY SINE Alu 1 305 0 74 0 0 32 chr5 56319815 56319883 -143310267 + AT_rich Low_complexity Low_complexity 23 90 0 519 269 81 22 chr5 56319914 56320137 -143310013 - HERVL40 LTR ERVL -1416 4114 3879 1299 131 5 5 chr5 56320255 56320446 -143309704 + AluSc SINE Alu 1 191 -118 330 164 0 0 chr5 56320446 56320501 -143309649 + FLAM SINE Alu 78 132 -1 27 0 0 0 chr5 56320588 56320615 -143309535 + AT_rich Low_complexity Low_complexity 1 27 0 415 268 126 28 chr5 56320695 56320944 -143309206 + L1MC/D LINE L1 5378 5650 -519 214 171 37 122 chr5 56321312 56321394 -143308756 + MIR SINE MIR 104 178 -84 226 184 0 0 chr5 56321500 56321538 -143308612 + Alu SINE Alu 1 38 -264 * 361 68 0 81 chr5 56321522 56321635 -143308515 + FLAM SINE Alu 75 122 -11 2182 130 0 0 chr5 56322883 56323182 -143306968 + AluSx SINE Alu 1 299 -13 706 167 26 0 chr5 56323357 56323471 -143306679 + FLAM_C SINE Alu 2 118 -15 24 0 0 0 chr5 56323471 56323495 -143306655 + AT_rich Low_complexity Low_complexity 1 24 0 2281 98 7 0 chr5 56323575 56323872 -143306278 - AluSp SINE Alu -14 299 1 180 93 37 37 chr5 56324181 56324235 -143305915 + (TTTG)n Simple_repeat Simple_repeat 2 55 0 2571 74 0 0 chr5 56324239 56324549 -143305601 - AluSx SINE Alu -2 310 1 308 258 232 13 chr5 56324615 56324766 -143305384 + MIR3 SINE MIR 20 203 -5 449 132 0 0 chr5 56324881 56324949 -143305201 + AluS SINE Alu 4 71 -242 856 186 177 19 chr5 56325255 56325572 -143304578 + MER69 DNA AcHobo 1845 2211 -315 14105 143 36 28 chr5 56325572 56326088 -143304062 - L1MA2 LINE L1 -222 7501 6990 279 0 0 0 chr5 56326088 56326119 -143304031 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2210 106 0 0 chr5 56326121 56326405 -143303745 - AluSq SINE Alu -29 284 1 14105 143 36 28 chr5 56326405 56328231 -143301919 - L1MA2 LINE L1 -733 6990 5179 180 0 0 0 chr5 56328231 56328251 -143301899 + (TTG)n Simple_repeat Simple_repeat 2 21 0 14105 143 36 28 chr5 56328251 56329179 -143300971 - L1MA2 LINE L1 -2544 5179 4259 2159 116 0 7 chr5 56329179 56329481 -143300669 + AluSx SINE Alu 1 300 -12 14105 143 36 28 chr5 56329481 56329520 -143300630 - L1MA2 LINE L1 -3464 4259 4222 2315 115 0 0 chr5 56329520 56329816 -143300334 + AluSx SINE Alu 2 297 -15 14105 143 36 28 chr5 56329816 56331666 -143298484 - L1MA2 LINE L1 -3501 4222 2286 2317 95 3 0 chr5 56331666 56331960 -143298190 - AluSp SINE Alu -18 295 1 14105 143 36 28 chr5 56331960 56332521 -143297629 - L1MA2 LINE L1 -5437 2286 1731 2318 88 3 7 chr5 56333059 56333365 -143296785 - AluSq SINE Alu -8 305 1 700 208 16 0 chr5 56333660 56333785 -143296365 - FLAM_C SINE Alu -6 127 1 266 354 0 13 chr5 56334003 56334082 -143296068 - MIR3 SINE MIR -118 90 13 1914 158 11 26 chr5 56334281 56334630 -143295520 - MER7A DNA MER2_type 0 346 5 943 133 8 0 chr5 56334682 56334810 -143295340 - FLAM_C SINE Alu -3 130 2 203 345 186 0 chr5 56335224 56335369 -143294781 + MIR3 SINE MIR 34 205 -3 7817 107 76 34 chr5 56335441 56336689 -143293461 - HSMAR2 DNA Mariner -1 1301 1 555 211 9 26 chr5 56337454 56337568 -143292582 - FLAM_A SINE Alu -29 113 2 204 67 0 0 chr5 56337678 56337708 -143292442 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 762 205 48 12 chr5 56337917 56338083 -143292067 - AluJo SINE Alu -18 294 123 2043 120 0 39 chr5 56341547 56341856 -143288294 + AluSx SINE Alu 1 297 -15 1929 100 18 36 chr5 56342224 56342505 -143287645 + AluSx SINE Alu 1 276 -36 390 229 0 8 chr5 56342508 56342630 -143287520 + (TA)n Simple_repeat Simple_repeat 2 122 0 351 235 53 61 chr5 56342901 56343033 -143287117 - MER5B DNA MER1_type -2 176 46 1898 151 10 7 chr5 56343052 56343351 -143286799 - AluSx SINE Alu -11 301 2 1858 163 10 3 chr5 56343442 56343743 -143286407 - AluSx SINE Alu -9 303 1 273 293 61 0 chr5 56343774 56343873 -143286277 + MIR SINE MIR 153 257 -5 818 149 8 22 chr5 56344398 56344532 -143285618 - FLAM_C SINE Alu -10 133 2 1990 149 7 3 chr5 56344761 56345057 -143285093 - AluSx SINE Alu -15 297 1 576 209 164 0 chr5 56345418 56345552 -143284598 - MER58B DNA MER1_type -5 336 181 244 371 119 13 chr5 56347132 56347291 -143282859 - L2 LINE L2 -397 2917 2742 244 286 16 0 chr5 56348107 56348170 -143281980 - MARNA DNA Mariner -399 187 124 205 283 0 0 chr5 56348177 56348223 -143281927 - L2 LINE L2 -17 3255 3210 230 238 12 75 chr5 56348227 56348307 -143281843 + MARNA DNA Mariner 459 533 -53 2182 130 0 0 chr5 56348375 56348674 -143281476 + AluSx SINE Alu 1 299 -13 268 190 25 63 chr5 56349016 56349095 -143281055 + L3 LINE CR1 1232 1307 -270 218 294 43 0 chr5 56349086 56349178 -143280972 + MIR SINE MIR 82 177 -85 * 228 254 100 9 chr5 56349474 56349587 -143280563 - MIR SINE MIR -81 127 30 972 183 172 34 chr5 56349589 56349851 -143280299 - MLT1A1 LTR MaLR 0 365 68 323 313 120 32 chr5 56350004 56350221 -143279929 + L3 LINE CR1 1340 1575 -2 2108 119 3 7 chr5 56350247 56350542 -143279608 - AluSx SINE Alu -18 294 1 2716 182 13 34 chr5 56350697 56351235 -143278915 - Charlie1 DNA MER1_type -1075 1686 1160 2444 218 49 48 chr5 56351253 56351410 -143278740 - Charlie1 DNA MER1_type -1989 772 617 2151 121 17 0 chr5 56351410 56351708 -143278442 - AluSp SINE Alu -10 303 1 2444 218 49 48 chr5 56351708 56351787 -143278363 - Charlie1 DNA MER1_type -2144 617 540 2219 124 3 0 chr5 56351787 56352085 -143278065 - AluSx SINE Alu -10 302 4 2444 218 49 48 chr5 56352085 56352437 -143277713 - Charlie1 DNA MER1_type -2221 540 179 2343 116 55 22 chr5 56352437 56352800 -143277350 - THE1C LTR MaLR 0 375 1 2444 218 49 48 chr5 56352800 56352980 -143277170 - Charlie1 DNA MER1_type -2582 179 1 193 240 120 100 chr5 56353087 56353151 -143276999 + L2 LINE L2 3167 3235 -37 835 197 0 0 chr5 56353151 56353283 -143276867 + AluJo SINE Alu 1 132 -170 193 240 120 100 chr5 56353283 56353318 -143276832 + L2 LINE L2 3235 3268 -4 2089 128 13 0 chr5 56354111 56354409 -143275741 + AluSx SINE Alu 1 302 -10 253 133 0 0 chr5 56354554 56354599 -143275551 + LTR66 LTR ERVL 394 438 -172 301 296 23 0 chr5 56354604 56354692 -143275458 - L1MC4 LINE L1 -1339 6703 6614 230 259 70 126 chr5 56354861 56355004 -143275146 - L2 LINE L2 0 3272 3138 997 178 53 0 chr5 56355079 56355231 -143274919 + AluJo SINE Alu 141 300 -2 1550 166 0 66 chr5 56355374 56355694 -143274456 + AluSx SINE Alu 3 301 -1 394 257 0 0 chr5 56356069 56356143 -143274007 - MER69 DNA AcHobo -926 300 227 282 310 60 10 chr5 56356216 56356316 -143273834 + L2 LINE L2 3141 3245 -27 1043 214 0 0 chr5 56356477 56356659 -143273491 - MER58A DNA MER1_type 0 224 43 1128 123 62 6 chr5 56356716 56356895 -143273255 - AluSq SINE Alu -124 189 1 1479 197 3 52 chr5 56357248 56357558 -143272592 + AluJb SINE Alu 1 295 -17 2213 105 3 0 chr5 56357561 56357856 -143272294 + AluSx SINE Alu 1 296 -16 565 277 118 56 chr5 56358007 56358342 -143271808 - MLT1K LTR MaLR -153 435 71 2755 157 47 14 chr5 56358342 56358827 -143271323 - MLT1D LTR MaLR -4 501 1 565 277 118 56 chr5 56358827 56358881 -143271269 - MLT1K LTR MaLR -517 71 22 393 346 6 32 chr5 56358884 56359040 -143271110 + MIR3 SINE MIR 47 198 -10 243 236 163 49 chr5 56359058 56359181 -143270969 + L1MC/D LINE L1 5495 5631 -2177 219 262 10 39 chr5 56359237 56359309 -143270841 + (TA)n Simple_repeat Simple_repeat 2 72 -29 1530 189 61 0 chr5 56359309 56359589 -143270561 + AluJb SINE Alu 8 304 -8 219 262 10 39 chr5 56359589 56359619 -143270531 + (TA)n Simple_repeat Simple_repeat 72 101 0 2132 139 0 0 chr5 56359711 56360020 -143270130 + AluSx SINE Alu 1 309 -3 4395 133 44 4 chr5 56360157 56360844 -143269306 + MER50 LTR ERV1 1 714 -20 559 285 52 41 chr5 56361175 56361444 -143268706 - L1ME3A LINE L1 -283 5881 5610 817 174 7 21 chr5 56361476 56361620 -143268530 + FLAM_C SINE Alu 2 143 0 933 203 70 48 chr5 56361973 56362200 -143267950 + MER46A DNA MER2_type 5 236 0 2225 130 58 6 chr5 56363621 56363967 -143266183 - THE1B LTR MaLR 0 364 1 326 302 108 22 chr5 56364268 56364407 -143265743 + MIR3 SINE MIR 37 187 -21 1995 167 72 31 chr5 56364467 56365001 -143265149 + MLT2A2 LTR ERVL 1 551 -3 3287 158 112 36 chr5 56365004 56365676 -143264474 - LTR8A LTR ERV1 -4 723 1 186 103 0 0 chr5 56365941 56365970 -143264180 + (CA)n Simple_repeat Simple_repeat 2 30 0 3010 75 8 11 chr5 56366129 56366505 -143263645 - THE1C LTR MaLR 0 375 1 239 230 38 68 chr5 56366526 56366634 -143263516 + MIR SINE MIR 33 137 -99 349 207 197 42 chr5 56367817 56368030 -143262120 - MER5C DNA MER1_type 0 324 79 585 127 0 85 chr5 56368030 56368148 -143262002 + MER50 LTR ERV1 497 604 -130 470 294 70 16 chr5 56368239 56368426 -143261724 + MIR SINE MIR 31 227 -35 208 76 89 13 chr5 56369970 56370049 -143260101 + (TA)n Simple_repeat Simple_repeat 2 86 0 1492 172 0 4 chr5 56370049 56370282 -143259868 - AluJb SINE Alu -80 232 1 760 295 42 64 chr5 56370588 56371229 -143258921 - L1MEd LINE L1 -4972 1147 521 674 283 58 0 chr5 56372039 56372212 -143257938 - MER5A DNA MER1_type 0 189 7 2586 97 26 9 chr5 56372354 56372703 -143257447 + THE1A LTR MaLR 1 355 0 8935 90 15 0 chr5 56372703 56373870 -143256280 + THE1A-int LTR MaLR 1 1185 -395 493 150 55 24 chr5 56373871 56373982 -143256168 + THE1A LTR MaLR 292 355 0 1078 187 76 129 chr5 56374542 56374937 -143255213 + MSTC LTR MaLR 1 371 -57 1817 159 24 3 chr5 56374937 56375254 -143254896 + AluJb SINE Alu 1 312 0 1078 187 76 129 chr5 56375254 56375307 -143254843 + MSTC LTR MaLR 371 425 -3 249 282 182 27 chr5 56375487 56375597 -143254553 - L2 LINE L2 -9 3263 3137 2422 66 0 0 chr5 56376827 56377129 -143253021 - AluY SINE Alu -9 302 1 2163 165 65 18 chr5 56377311 56377754 -143252396 + MLT1C LTR MaLR 1 464 -3 2820 188 35 29 chr5 56377834 56378378 -143251772 + MER44D DNA MER2_type 1 602 -3 324 0 0 0 chr5 56379544 56379580 -143250570 + (CA)n Simple_repeat Simple_repeat 2 37 0 2264 126 13 32 chr5 56379896 56380244 -143249906 - L1MB2 LINE L1 -1 6170 5817 369 0 0 0 chr5 56380244 56380285 -143249865 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1771 169 7 0 chr5 56380287 56380566 -143249584 - AluJb SINE Alu -31 281 1 2264 126 13 32 chr5 56380566 56380586 -143249564 - L1MB2 LINE L1 -355 5816 5806 1073 138 44 89 chr5 56380863 56381088 -143249062 + MER20 DNA MER1_type 2 216 -3 640 161 11 0 chr5 56381774 56381891 -143248259 + L1MA7 LINE L1 6006 6125 -64 1001 121 0 0 chr5 56384202 56384334 -143245816 - FLAM_C SINE Alu -1 132 1 790 162 19 13 chr5 56384334 56384481 -143245669 + L1MA7 LINE L1 6095 6245 -46 22 70 0 0 chr5 56384584 56384627 -143245523 + AT_rich Low_complexity Low_complexity 1 43 0 564 237 192 17 chr5 56385074 56385251 -143244899 + MIR SINE MIR 13 220 -42 2783 43 0 3 chr5 56386204 56386526 -143243624 - L1PA4 LINE L1 -3 6152 5832 2279 97 0 16 chr5 56387007 56387316 -143242834 - AluSx SINE Alu -8 304 1 1936 176 108 61 chr5 56387410 56387585 -143242565 + MLT1C LTR MaLR 3 168 -299 2225 98 0 10 chr5 56387585 56387882 -143242268 + AluY SINE Alu 1 294 -17 1936 176 108 61 chr5 56387882 56388150 -143242000 + MLT1C LTR MaLR 168 467 0 192 254 0 18 chr5 56389663 56389718 -143240432 - MIR SINE MIR -13 249 196 209 213 21 0 chr5 56389727 56389774 -143240376 + GA-rich Low_complexity Low_complexity 1 48 0 242 233 27 14 chr5 56390071 56390144 -143240006 + L2 LINE L2 3198 3271 -1 2252 96 3 3 chr5 56390391 56390683 -143239467 - AluSq SINE Alu -21 292 1 309 178 27 14 chr5 56390886 56390959 -143239191 - MLT1J LTR MaLR -2 509 436 1071 238 68 46 chr5 56391003 56391110 -143239040 - MLT1J LTR MaLR -178 333 230 1885 155 7 7 chr5 56391110 56391406 -143238744 - AluJb SINE Alu -16 296 1 1071 238 68 46 chr5 56391406 56391622 -143238528 - MLT1J LTR MaLR -281 230 3 367 167 15 0 chr5 56391917 56391983 -143238167 - MER5A DNA MER1_type -91 98 32 2681 181 83 95 chr5 56392078 56392814 -143237336 - LTR8A LTR ERV1 0 727 1 209 329 0 14 chr5 56392843 56392916 -143237234 - MER5A DNA MER1_type 0 189 118 1574 223 23 54 chr5 56393270 56393656 -143236494 - MLT1A2 LTR MaLR 0 374 1 2541 167 39 76 chr5 56394677 56395152 -143234998 - MLT2B1 LTR ERVL 0 520 66 2009 143 0 13 chr5 56395152 56395453 -143234697 + AluSx SINE Alu 1 297 -15 2541 167 39 76 chr5 56395453 56395517 -143234633 - MLT2B1 LTR ERVL -454 66 1 2161 143 0 0 chr5 56395581 56395889 -143234261 + AluSg SINE Alu 1 308 -2 1330 244 91 18 chr5 56395904 56396301 -143233849 + MER74B LTR ERVL 123 548 -74 345 200 53 11 chr5 56396218 56396313 -143233837 - MER88 LTR ERVL -287 177 79 * 428 308 75 48 chr5 56397605 56398123 -143232027 - L2 LINE L2 -60 3212 2679 391 229 15 53 chr5 56398109 56398240 -143231910 + MIR SINE MIR 112 237 -25 * 202 182 0 0 chr5 56398380 56398413 -143231737 + (CCTG)n Simple_repeat Simple_repeat 2 34 0 1400 218 163 12 chr5 56398677 56399081 -143231069 + LTR33 LTR ERVL 47 511 -10 2254 219 138 21 chr5 56399177 56399829 -143230321 + HsTC2c DNA MER2_type 2 729 0 632 294 149 21 chr5 56400772 56401207 -143228943 + LTR33 LTR ERVL 23 513 -8 2355 102 0 6 chr5 56401403 56401717 -143228433 + AluSx SINE Alu 1 312 0 1988 133 0 4 chr5 56401933 56402212 -143227938 + AluSq SINE Alu 1 278 -35 280 250 269 0 chr5 56402357 56402465 -143227685 - MER91C DNA MER1_type -2 138 2 298 338 164 0 chr5 56402714 56402915 -143227235 + MIR SINE MIR 23 256 -6 809 210 49 6 chr5 56403393 56403555 -143226595 - AluJo SINE Alu -143 169 1 252 275 88 81 chr5 56403797 56403957 -143226193 - MIR SINE MIR -64 198 38 21 36 0 0 chr5 56404002 56404030 -143226120 + AT_rich Low_complexity Low_complexity 1 28 0 2162 134 7 0 chr5 56404365 56404664 -143225486 - AluSx SINE Alu -11 301 1 860 295 4 20 chr5 56404767 56405018 -143225132 - MIR SINE MIR 0 262 16 1958 157 0 13 chr5 56405184 56405489 -143224661 - AluSx SINE Alu -11 301 1 1754 174 3 34 chr5 56406230 56406552 -143223598 - AluJo SINE Alu 0 312 1 408 238 158 43 chr5 56407278 56407442 -143222708 + MER5A DNA MER1_type 6 188 -1 423 276 123 28 chr5 56407732 56407960 -143222190 + MIR SINE MIR 1 256 -6 21 0 0 0 chr5 56407966 56407987 -143222163 + AT_rich Low_complexity Low_complexity 1 21 0 442 326 92 24 chr5 56408144 56408438 -143221712 + L2 LINE L2 2276 2589 -725 421 243 141 34 chr5 56408642 56408819 -143221331 + L2 LINE L2 3113 3308 -5 408 356 51 5 chr5 56408830 56409046 -143221104 + L2 LINE L2 2740 2965 -349 220 133 22 0 chr5 56409169 56409214 -143220936 + (TTAA)n Simple_repeat Simple_repeat 4 49 0 670 255 125 10 chr5 56409232 56409432 -143220718 + MER58A DNA MER1_type 1 223 -1 190 318 0 0 chr5 56409441 56409485 -143220665 + L2 LINE L2 3162 3205 -67 444 282 73 16 chr5 56410319 56410443 -143219707 - L2 LINE L2 0 3313 3183 * 880 223 144 24 chr5 56410418 56410709 -143219441 - L2 LINE L2 -468 2846 2521 830 203 5 31 chr5 56410888 56411080 -143219070 + LTR41 LTR ERVL 1 187 -586 1658 155 43 69 chr5 56411540 56411915 -143218235 - MSTC LTR MaLR -51 377 13 401 157 14 0 chr5 56411930 56412000 -143218150 - L1PA15 LINE L1 -14 6151 6081 2038 134 31 0 chr5 56412097 56412388 -143217762 - AluSx SINE Alu -12 300 1 687 209 67 0 chr5 56413061 56413195 -143216955 + MIR SINE MIR 13 155 -107 311 198 165 66 chr5 56413461 56413552 -143216598 + MLT1L LTR MaLR 317 416 -199 421 267 220 13 chr5 56413733 56413883 -143216267 + MER5A DNA MER1_type 3 183 -6 401 276 71 0 chr5 56413928 56414026 -143216124 - L2 LINE L2 -21 3292 3188 3380 101 4 2 chr5 56414393 56414859 -143215291 - MER41A LTR ERV1 -86 468 2 3616 174 56 18 chr5 56414860 56415580 -143214570 - L1MD2 LINE L1 -228 6131 5385 43565 35 22 1 chr5 56415619 56421647 -143208503 - L1PA2 LINE L1 0 6155 1 658 262 152 23 chr5 56422836 56423092 -143207058 - L2 LINE L2 -897 2417 2129 480 182 0 55 chr5 56423092 56423202 -143206948 + FRAM SINE Alu 73 176 0 1490 190 3 36 chr5 56423283 56423588 -143206562 + AluJo SINE Alu 1 295 -17 236 229 0 0 chr5 56423590 56423638 -143206512 + Alu SINE Alu 253 300 -2 917 178 29 120 chr5 56423687 56423928 -143206222 + AluJo SINE Alu 41 259 -53 1637 270 74 12 chr5 56423929 56424202 -143205948 - L2 LINE L2 -1326 1988 1733 204 40 0 0 chr5 56424202 56424227 -143205923 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1637 270 74 12 chr5 56424227 56424531 -143205619 - L2 LINE L2 -1581 1733 1375 276 260 0 21 chr5 56424581 56424677 -143205473 - L2 LINE L2 -1365 1949 1856 338 253 135 62 chr5 56424829 56425007 -143205143 + MLT1K LTR MaLR 274 464 -124 1959 162 82 24 chr5 56425043 56425476 -143204674 - MER89 LTR ERV1 0 559 1 236 259 0 0 chr5 56425492 56425550 -143204600 + MLT1K LTR MaLR 522 579 -9 226 304 196 0 chr5 56425643 56425791 -143204359 - MIR SINE MIR -5 257 81 1820 140 7 3 chr5 56426349 56426634 -143203516 + AluJo SINE Alu 21 306 -6 186 43 0 0 chr5 56427309 56427332 -143202818 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 235 241 38 13 chr5 56428095 56428174 -143201976 + L3b LINE CR1 1120 1200 -383 573 15 0 0 chr5 56428926 56428992 -143201158 + (TA)n Simple_repeat Simple_repeat 1 66 0 335 256 139 31 chr5 56429379 56429508 -143200642 + MIR SINE MIR 70 212 -50 22 0 0 0 chr5 56429684 56429706 -143200444 + AT_rich Low_complexity Low_complexity 1 22 0 193 270 0 0 chr5 56429751 56429788 -143200362 + L2 LINE L2 3139 3175 -97 806 194 0 0 chr5 56429976 56430105 -143200045 - FLAM_A SINE Alu -4 129 1 194 350 8 25 chr5 56432005 56432125 -143198025 - L2 LINE L2 -1257 2057 1940 927 178 0 0 chr5 56432794 56432940 -143197210 - FRAM SINE Alu -30 146 1 906 193 126 4 chr5 56433579 56433818 -143196332 - MER20B DNA MER1_type -1 782 515 1435 228 143 2 chr5 56434147 56434546 -143195604 - MER20B DNA MER1_type -270 513 59 388 260 72 72 chr5 56434993 56435216 -143194934 + MLT1K LTR MaLR 226 448 -140 6828 128 3 6 chr5 56435218 56436677 -143193473 - L1PB1 LINE L1 -3 6148 4690 4805 192 9 9 chr5 56436920 56437968 -143192182 + L1 LINE L1 3647 4693 -1453 1260 175 58 3 chr5 56438092 56438383 -143191767 + MER33 DNA MER1_type 14 320 -4 585 28 0 0 chr5 56438833 56438904 -143191246 + (GA)n Simple_repeat Simple_repeat 2 72 0 262 219 102 124 chr5 56439541 56439678 -143190472 + MIR SINE MIR 71 204 -58 211 362 51 43 chr5 56441546 56441684 -143188466 + L2 LINE L2 3173 3311 -2 234 174 0 0 chr5 56441713 56441759 -143188391 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 296 26 0 0 chr5 56441760 56441798 -143188352 + L1PA4 LINE L1 5747 5784 -371 * 13988 25 0 0 chr5 56441796 56443534 -143186616 - L1PA3 LINE L1 -1389 4757 3020 7622 27 1 0 chr5 56443534 56444938 -143185212 + L1PA3 LINE L1 4746 6151 -4 3094 36 0 0 chr5 56444942 56445327 -143184823 + L1PA4 LINE L1 5770 6154 -1 317 82 20 0 chr5 56445331 56445380 -143184770 + (TGGA)n Simple_repeat Simple_repeat 3 52 0 1116 238 98 55 chr5 56446185 56446622 -143183528 - MLT1C LTR MaLR -1 466 11 281 256 152 18 chr5 56446645 56446809 -143183341 - MLT1H LTR MaLR -363 186 1 459 269 15 15 chr5 56446882 56447016 -143183134 + MIR SINE MIR 128 261 -1 1785 44 40 0 chr5 56448162 56448388 -143181762 - L1PA3 LINE L1 -3 6152 5918 1349 145 40 0 chr5 56448388 56448653 -143181497 + L1PA10 LINE L1 5908 6181 0 1831 167 3 0 chr5 56448743 56449025 -143181125 + AluJo SINE Alu 6 288 -24 228 163 0 0 chr5 56449251 56449294 -143180856 + (TG)n Simple_repeat Simple_repeat 2 44 0 429 234 43 87 chr5 56449439 56449670 -143180480 + MLT1L LTR MaLR 1 221 -394 452 301 94 49 chr5 56450687 56450858 -143179292 - Charlie8 DNA MER1_type -60 281 92 2122 128 0 10 chr5 56450858 56451156 -143178994 + AluSx SINE Alu 1 295 -17 452 301 94 49 chr5 56451156 56451250 -143178900 - Charlie8 DNA MER1_type -249 92 4 2105 127 7 0 chr5 56451667 56451959 -143178191 - AluSp SINE Alu -19 294 1 5773 184 28 17 chr5 56452587 56454914 -143175236 - L1MC1 LINE L1 -17 6596 4242 2256 96 6 19 chr5 56454914 56455228 -143174922 - AluSg SINE Alu 0 310 1 5773 184 28 17 chr5 56455228 56455289 -143174861 - L1MC1 LINE L1 -2371 4242 4183 602 152 11 0 chr5 56455320 56455412 -143174738 - FLAM_C SINE Alu -18 125 33 263 237 61 0 chr5 56455412 56455526 -143174624 - L1MC1 LINE L1 -2230 4196 4076 4484 221 29 52 chr5 56455541 56457592 -143172558 - L1MC1 LINE L1 -2294 4132 2131 1793 224 41 5 chr5 56457746 56458188 -143171962 + MLT1C LTR MaLR 10 467 0 193 269 110 71 chr5 56458677 56458859 -143171291 - L3b LINE CR1 -26 1557 1369 23 68 0 0 chr5 56458908 56458952 -143171198 + AT_rich Low_complexity Low_complexity 1 44 0 745 234 6 0 chr5 56458966 56459137 -143171013 - L1MD2 LINE L1 -16 6343 6172 3453 171 21 87 chr5 56459363 56460221 -143169929 - MER21A LTR ERV1 -20 911 111 796 141 11 89 chr5 56460212 56460403 -143169747 - MER21A LTR ERV1 -755 176 1 * 806 196 119 5 chr5 56460499 56460883 -143169267 + MER74A LTR ERVL 1 558 0 320 266 28 18 chr5 56461165 56461274 -143168876 - L1ME LINE L1 -303 5818 5709 180 0 0 0 chr5 56461384 56461404 -143168746 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1697 146 38 55 chr5 56461495 56461838 -143168312 + MER44D DNA MER2_type 2 608 -1 304 115 0 16 chr5 56462004 56462065 -143168085 + L1MA1 LINE L1 6243 6302 0 260 338 14 14 chr5 56462147 56462221 -143167929 + MER5A DNA MER1_type 81 154 -35 1765 169 0 3 chr5 56462221 56462525 -143167625 - AluJo SINE Alu 0 303 1 276 254 75 0 chr5 56462551 56462618 -143167532 - MIR3 SINE MIR -52 156 85 5959 135 29 21 chr5 56463692 56464930 -143165220 - L1MA5A LINE L1 -3 6294 5047 2270 118 0 0 chr5 56464930 56465234 -143164916 - AluSq SINE Alu -9 304 1 5959 135 29 21 chr5 56465234 56465727 -143164423 - L1MA5A LINE L1 -1250 5047 4559 1684 169 7 42 chr5 56465737 56466044 -143164106 - AluJo SINE Alu -16 296 1 377 306 10 0 chr5 56467265 56467363 -143162787 - L2 LINE L2 -33 3239 3141 221 222 0 0 chr5 56467363 56467408 -143162742 + GA-rich Low_complexity Low_complexity 2 46 0 793 257 159 19 chr5 56467551 56467979 -143162171 - LTR33 LTR ERVL -31 490 3 306 294 253 0 chr5 56468410 56468631 -143161519 - L1MC/D LINE L1 -1989 5819 5543 21 110 0 0 chr5 56468799 56468890 -143161260 + AT_rich Low_complexity Low_complexity 1 91 0 396 259 44 87 chr5 56469338 56469659 -143160491 - MLT1K LTR MaLR -2 586 280 2051 192 53 84 chr5 56470745 56471391 -143158759 - MLT1E2 LTR MaLR 0 626 1 345 125 0 0 chr5 56471553 56471609 -143158541 + (TG)n Simple_repeat Simple_repeat 1 56 0 299 103 0 17 chr5 56471608 56471666 -143158484 + (GA)n Simple_repeat Simple_repeat 1 57 0 * 2078 170 37 8 chr5 56471838 56472215 -143157935 + MLT1B LTR MaLR 1 388 -2 238 319 142 35 chr5 56472640 56472753 -143157397 + MIR3 SINE MIR 32 156 -52 192 333 27 13 chr5 56474346 56474421 -143155729 - L2 LINE L2 -206 3066 2991 495 204 92 35 chr5 56474466 56474608 -143155542 - MIR SINE MIR -31 231 82 232 359 147 22 chr5 56474745 56475461 -143154689 - L2 LINE L2 -468 2846 2042 907 160 17 0 chr5 56476498 56476679 -143153471 - MER53 DNA DNA -2 187 4 3838 169 7 18 chr5 56476899 56477639 -143152511 - L1MB3 LINE L1 -1 6182 5451 1954 118 14 20 chr5 56477652 56477949 -143152201 - AluSc SINE Alu -14 295 1 335 320 46 30 chr5 56478073 56478270 -143151880 - MARNA DNA Mariner -342 244 45 2116 108 3 7 chr5 56479793 56480080 -143150070 - AluSx SINE Alu -18 294 9 229 35 0 0 chr5 56480722 56480751 -143149399 - LTR65 LTR ERV1 -439 230 202 280 270 100 50 chr5 56481049 56481149 -143149001 + L2 LINE L2 3168 3272 0 345 325 88 8 chr5 56482064 56482413 -143147737 + L1MC4a LINE L1 5540 5818 -303 504 338 31 15 chr5 56483602 56483813 -143146337 + MIR SINE MIR 37 248 -14 2083 97 10 20 chr5 56484042 56484340 -143145810 + AluSg SINE Alu 5 299 -11 287 339 70 0 chr5 56484650 56484765 -143145385 - L2 LINE L2 0 3313 3191 359 354 92 5 chr5 56484834 56485040 -143145110 - L2 LINE L2 -214 3058 2835 2801 84 0 11 chr5 56491118 56491477 -143138673 + THE1B LTR MaLR 1 355 -9 997 243 60 7 chr5 56491787 56492071 -143138079 - LTR16C LTR ERVL -57 434 136 561 270 122 41 chr5 56492319 56492515 -143137635 + MIR SINE MIR 4 215 -47 247 265 59 150 chr5 56492526 56492579 -143137571 - L2 LINE L2 -60 3212 3156 1921 146 7 0 chr5 56492579 56492867 -143137283 - AluSp SINE Alu -22 291 2 247 265 59 150 chr5 56492867 56493100 -143137050 - L2 LINE L2 -116 3156 2952 3729 65 38 8 chr5 56493139 56493612 -143136538 - L1PA10 LINE L1 -5 6163 5677 331 279 39 32 chr5 56493716 56493870 -143136280 + MIR3 SINE MIR 7 161 -47 803 169 0 40 chr5 56494402 56494550 -143135600 - FLAM_C SINE Alu 0 143 2 1759 233 38 69 chr5 56494854 56495378 -143134772 - MLT1J LTR MaLR -2 509 2 299 234 35 99 chr5 56495402 56495543 -143134607 + MIR SINE MIR 80 211 -51 280 354 50 50 chr5 56497028 56497268 -143132882 - L3b LINE CR1 -9 1574 1335 263 270 82 54 chr5 56498219 56498374 -143131776 - MIR SINE MIR -67 141 25 326 324 179 26 chr5 56498816 56499402 -143130748 + L2 LINE L2 1770 2445 -869 522 261 133 11 chr5 56500538 56500718 -143129432 - MER115 DNA AcHobo -2 691 490 666 313 73 0 chr5 56500819 56501011 -143129139 - MER115 DNA AcHobo -336 357 152 208 305 149 28 chr5 56502875 56503016 -143127134 + MIR SINE MIR 99 256 -6 1122 237 49 97 chr5 56503022 56503557 -143126593 + MLT1J LTR MaLR 1 509 -2 381 264 40 16 chr5 56503567 56503692 -143126458 - MIR SINE MIR -57 205 78 1057 249 44 4 chr5 56503796 56504045 -143126105 + MIR SINE MIR 2 260 -2 2253 102 3 0 chr5 56504771 56505064 -143125086 - AluSp SINE Alu -19 294 1 369 43 0 0 chr5 56506252 56506299 -143123851 + (TG)n Simple_repeat Simple_repeat 2 48 0 1428 231 169 3 chr5 56506592 56506982 -143123168 - MLT1G1 LTR MaLR 0 595 141 192 40 0 0 chr5 56507396 56507421 -143122729 + (TTTTTG)n Simple_repeat Simple_repeat 1 25 0 2244 109 10 0 chr5 56508337 56508641 -143121509 - AluSx SINE Alu -5 307 1 872 154 0 0 chr5 56508774 56508910 -143121240 - MER20 DNA MER1_type -1 218 83 234 343 0 0 chr5 56510512 56510585 -143119565 - MIR SINE MIR -73 189 117 353 269 51 86 chr5 56510612 56510787 -143119363 - MIR SINE MIR -18 244 76 219 277 0 0 chr5 56511026 56511090 -143119060 + MIR SINE MIR 101 163 -61 210 71 0 0 chr5 56511436 56511464 -143118686 + (TA)n Simple_repeat Simple_repeat 2 29 0 2311 75 0 0 chr5 56511476 56511791 -143118359 + AluY SINE Alu 1 315 0 326 228 218 0 chr5 56512145 56512246 -143117904 - L2 LINE L2 0 3313 3191 260 345 82 15 chr5 56513213 56513413 -143116737 + MIR3 SINE MIR 7 216 -46 27 0 0 0 chr5 56513492 56513519 -143116631 + AT_rich Low_complexity Low_complexity 1 27 0 4191 139 12 56 chr5 56513519 56513721 -143116429 - L1MA4 LINE L1 -9 6291 6082 2211 109 3 0 chr5 56513721 56514015 -143116135 - AluSp SINE Alu -18 295 1 4191 139 12 56 chr5 56514015 56514586 -143115564 - L1MA4 LINE L1 -218 6082 5552 200 367 39 6 chr5 56514688 56514868 -143115282 - L2 LINE L2 -569 2745 2560 307 308 43 48 chr5 56516589 56516797 -143113353 - MIR SINE MIR -9 253 47 181 341 57 23 chr5 56516878 56516966 -143113184 + MIR SINE MIR 63 153 -109 362 83 0 0 chr5 56517453 56517501 -143112649 + MADE1 DNA Mariner 1 48 -32 480 259 107 58 chr5 56517530 56517754 -143112396 - MIR SINE MIR -22 240 6 2205 105 0 3 chr5 56518284 56518604 -143111546 - AluSx SINE Alu 0 319 1 207 0 0 0 chr5 56519248 56519271 -143110879 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 412 310 81 17 chr5 56519469 56519643 -143110507 - MIR SINE MIR -58 204 20 205 182 0 0 chr5 56520647 56520680 -143109470 + polypurine Low_complexity Low_complexity 2 34 0 487 206 22 0 chr5 56521596 56521688 -143108462 - MER115 DNA AcHobo -2 691 598 207 0 0 0 chr5 56522095 56522118 -143108032 + (T)n Simple_repeat Simple_repeat 1 23 0 242 225 34 11 chr5 56522615 56522704 -143107446 + (TA)n Simple_repeat Simple_repeat 1 91 0 29 60 0 0 chr5 56522722 56522772 -143107378 + AT_rich Low_complexity Low_complexity 1 50 0 409 376 0 0 chr5 56522799 56522969 -143107181 - MIR SINE MIR -65 197 28 2269 193 63 17 chr5 56523097 56523575 -143106575 + MLT1D LTR MaLR 3 502 -3 1860 134 3 17 chr5 56523614 56523906 -143106244 + L1PA13 LINE L1 5872 6159 -4 21 36 0 0 chr5 56523924 56523952 -143106198 + AT_rich Low_complexity Low_complexity 1 28 0 7829 39 0 0 chr5 56524021 56525403 -143104747 - L1PA4 LINE L1 0 6155 4771 299 154 51 77 chr5 56526578 56526656 -143103494 + L1MA9 LINE L1 6234 6309 -3 739 144 85 0 chr5 56528984 56529102 -143101048 + FLAM_C SINE Alu 1 128 -5 21 0 0 0 chr5 56529278 56529299 -143100851 + AT_rich Low_complexity Low_complexity 1 21 0 748 362 47 0 chr5 56529749 56530136 -143100014 - MERVL LTR ERVL -471 5293 4889 998 203 28 6 chr5 56530153 56530335 -143099815 + MER58A DNA MER1_type 39 224 0 864 323 89 18 chr5 56530336 56531188 -143098962 - MERVL LTR ERVL -633 4852 3925 426 267 92 8 chr5 56531467 56531598 -143098552 + MERVL LTR ERVL 1887 2028 -3457 585 311 77 70 chr5 56531606 56531817 -143098333 - MERVL LTR ERVL -2122 3532 3324 2140 123 13 0 chr5 56531817 56532119 -143098031 - AluSg SINE Alu -4 306 1 585 311 77 70 chr5 56532119 56532190 -143097960 - MERVL LTR ERVL -2330 3324 3255 3555 121 31 21 chr5 56532190 56532712 -143097438 - MER1A DNA MER1_type 0 527 1 585 311 77 70 chr5 56532712 56532869 -143097281 - MERVL LTR ERVL -2399 3255 3089 275 277 26 78 chr5 56533236 56533413 -143096737 - MERVL LTR ERVL -2977 2508 2372 950 276 115 30 chr5 56533425 56533852 -143096298 + LTR33 LTR ERVL 57 519 -2 364 284 0 10 chr5 56534537 56534639 -143095511 - LTR67 LTR ERVL 0 557 457 884 194 22 19 chr5 56535154 56535188 -143094962 + L1MA4 LINE L1 5877 5909 -388 1159 155 5 15 chr5 56535188 56535394 -143094756 - L1MA4 LINE L1 -1 6299 6096 884 194 22 19 chr5 56535394 56535572 -143094578 + L1MA4 LINE L1 5909 6085 -212 25603 23 0 0 chr5 56535679 56539721 -143090429 - L1PA2 LINE L1 0 6155 2144 1116 43 0 0 chr5 56539713 56539852 -143090298 + L1P LINE L1 2041 2179 -3967 * 340 85 0 0 chr5 56540246 56540293 -143089857 + MADE1 DNA Mariner 34 80 0 295 260 0 14 chr5 56541251 56541324 -143088826 + CT-rich Low_complexity Low_complexity 2 73 0 1898 128 36 23 chr5 56541445 56541751 -143088399 + L1PA16 LINE L1 5856 6165 -1 226 224 61 0 chr5 56541857 56541906 -143088244 + LTR32 LTR ERVL 317 368 -103 417 205 0 13 chr5 56541906 56541984 -143088166 + LTR32 LTR ERVL 317 393 -78 202 231 39 0 chr5 56542076 56542128 -143088022 + GA-rich Low_complexity Low_complexity 1 54 0 192 327 84 65 chr5 56543283 56543390 -143086760 + MER5A DNA MER1_type 65 173 -16 184 261 22 0 chr5 56547604 56547650 -143082500 - MIR SINE MIR -2 260 214 314 316 149 0 chr5 56549482 56549596 -143080554 - L2 LINE L2 -1 3271 3141 596 279 69 39 chr5 56551497 56551718 -143078432 - MIR SINE MIR -15 247 24 216 97 0 0 chr5 56553053 56553084 -143077066 + (T)n Simple_repeat Simple_repeat 1 31 0 422 271 128 54 chr5 56553724 56553927 -143076223 + Charlie8 DNA MER1_type 46 263 -2154 3259 118 43 16 chr5 56554180 56554772 -143075378 - MER4B LTR ERV1 0 779 6 286 314 80 73 chr5 56555650 56555924 -143074226 + L2 LINE L2 2700 2975 -339 230 0 0 32 chr5 56556386 56556417 -143073733 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1871 149 3 3 chr5 56556417 56556699 -143073451 - AluSx SINE Alu -30 282 1 499 286 103 9 chr5 56557011 56557224 -143072926 + MIR SINE MIR 8 240 -22 383 302 65 29 chr5 56558344 56558483 -143071667 + MIR3 SINE MIR 3 146 -62 706 251 97 43 chr5 56558489 56558839 -143071311 + HAL1 LINE L1 1 369 -2138 1309 218 19 22 chr5 56558898 56559214 -143070936 - MLT1H LTR MaLR -228 321 7 3531 251 93 35 chr5 56559859 56561241 -143068909 + HAL1 LINE L1 535 1996 -511 2418 69 0 31 chr5 56561278 56561595 -143068555 + AluY SINE Alu 1 307 -4 224 258 0 16 chr5 56562094 56562156 -143067994 - MIR SINE MIR -46 216 156 371 21 21 0 chr5 56562369 56562417 -143067733 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 209 376 0 11 chr5 56562746 56562839 -143067311 + MIR SINE MIR 103 194 -68 1301 147 27 49 chr5 56563954 56564178 -143065972 - MER20 DNA MER1_type 0 219 1 1969 127 0 0 chr5 56564273 56564541 -143065609 - AluSx SINE Alu -4 308 41 25 31 0 0 chr5 56564544 56564576 -143065574 + AT_rich Low_complexity Low_complexity 1 32 0 593 241 196 0 chr5 56566523 56566681 -143063469 - MER91A DNA MER1_type 0 196 8 442 283 40 29 chr5 56567352 56567525 -143062625 + MER5B DNA MER1_type 4 178 0 478 141 0 13 chr5 56568057 56568135 -143062015 - MER116 DNA Mariner 0 80 4 371 305 8 0 chr5 56570526 56570657 -143059493 - L2 LINE L2 -1277 2037 1906 227 93 23 0 chr5 56570662 56570705 -143059445 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 195 100 0 0 chr5 56570705 56570735 -143059415 + (CATATA)n Simple_repeat Simple_repeat 5 34 0 285 317 77 0 chr5 56571272 56571376 -143058774 + MIR SINE MIR 117 228 -34 194 200 73 0 chr5 56571426 56571481 -143058669 - MIR SINE MIR -112 96 38 336 275 21 56 chr5 56572695 56572837 -143057313 + MIR SINE MIR 1 137 -71 2853 167 47 6 chr5 56572986 56573453 -143056697 + MER66B LTR ERV1 1 486 0 205 308 39 13 chr5 56573817 56573895 -143056255 + MIR SINE MIR 106 185 -77 258 176 0 0 chr5 56574953 56575004 -143055146 + CT-rich Low_complexity Low_complexity 3 53 0 575 260 140 10 chr5 56575903 56576103 -143054047 + MIR SINE MIR 1 226 -36 401 314 31 6 chr5 56576532 56576691 -143053459 - MIR SINE MIR -31 231 69 975 246 59 53 chr5 56577982 56578025 -143052125 - MLT2B1 LTR ERVL 0 520 479 234 0 0 0 chr5 56578025 56578051 -143052099 + (TG)n Simple_repeat Simple_repeat 1 26 0 975 246 59 53 chr5 56578051 56578365 -143051785 - MLT2B1 LTR ERVL -41 479 161 1257 212 12 59 chr5 56578367 56578707 -143051443 - MLT1D LTR MaLR -181 324 1 206 276 52 0 chr5 56579840 56579898 -143050252 - L3 LINE CR1 -304 1273 1213 180 237 26 0 chr5 56579927 56579965 -143050185 - L2 LINE L2 -9 3263 3225 291 364 27 0 chr5 56580071 56580181 -143049969 - L2 LINE L2 -219 3053 2941 1253 226 195 8 chr5 56580386 56580771 -143049379 - LTR16B LTR ERVL 0 464 8 252 330 113 59 chr5 56580931 56581242 -143048908 - L2 LINE L2 -459 2855 2506 886 161 8 0 chr5 56581242 56581372 -143048778 + FLAM_C SINE Alu 1 131 -2 252 330 113 59 chr5 56581372 56581554 -143048596 - L2 LINE L2 -808 2506 2335 1277 323 145 22 chr5 56581567 56582147 -143048003 - L3 LINE CR1 -393 1184 677 8824 99 53 26 chr5 56582147 56583448 -143046702 - SVA Other Other 0 1386 51 192 40 0 0 chr5 56583451 56583476 -143046674 + (GGGAGA)n Simple_repeat Simple_repeat 1 25 0 1277 323 145 22 chr5 56583476 56583877 -143046273 - L3 LINE CR1 -901 676 78 530 270 110 15 chr5 56583916 56584116 -143046034 + MIR SINE MIR 44 262 0 2731 50 3 0 chr5 56584272 56584595 -143045555 - LTR17 LTR ERV1 -456 324 1 14472 47 6 0 chr5 56584595 56586310 -143043840 - HERV17 LTR ERV1 0 8626 6902 6990 54 7 1 chr5 56586301 56587139 -143043011 - HERV17 LTR ERV1 -3559 5067 4225 * 358 264 22 0 chr5 56587395 56587486 -143042664 + MIR3 SINE MIR 116 208 0 1501 216 63 27 chr5 56587945 56588357 -143041793 - MER31B LTR ERV1 -39 427 1 26 0 0 0 chr5 56589284 56589310 -143040840 + AT_rich Low_complexity Low_complexity 1 26 0 216 253 20 20 chr5 56590487 56590522 -143039628 + (TA)n Simple_repeat Simple_repeat 1 35 -64 2281 181 19 9 chr5 56590522 56590943 -143039207 + MSTB LTR MaLR 2 426 0 216 253 20 20 chr5 56590943 56591006 -143039144 + (TA)n Simple_repeat Simple_repeat 34 99 0 219 88 0 0 chr5 56592270 56592304 -143037846 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 265 316 13 13 chr5 56592315 56592394 -143037756 - MIR SINE MIR -111 97 19 341 263 34 93 chr5 56592669 56592905 -143037245 + L2 LINE L2 3026 3247 -66 1622 43 38 5 chr5 56595245 56595455 -143034695 + L1PA6 LINE L1 5932 6148 -6 279 0 0 0 chr5 56595507 56595538 -143034612 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 231 61 0 0 chr5 56596945 56596978 -143033172 + (TG)n Simple_repeat Simple_repeat 1 33 0 448 264 6 18 chr5 56597743 56597762 -143032388 - L1MA10 LINE L1 0 6334 6316 909 231 17 23 chr5 56597762 56598035 -143032115 - L1ME2 LINE L1 -9 6155 5886 1800 228 33 74 chr5 56598134 56598795 -143031355 - L1ME2 LINE L1 -269 5895 5262 5090 241 90 17 chr5 56598800 56600850 -143029300 - L1ME2 LINE L1 -1034 5112 2912 3230 67 5 9 chr5 56600850 56601285 -143028865 - MLT2A2 LTR ERVL 0 453 21 892 229 15 35 chr5 56601291 56601632 -143028518 - L1ME2 LINE L1 -3249 2897 2564 393 290 87 22 chr5 56601691 56601874 -143028276 - MLT1J LTR MaLR -316 195 1 236 128 0 21 chr5 56603272 56603319 -143026831 + (GGAA)n Simple_repeat Simple_repeat 2 47 0 184 100 50 0 chr5 56604628 56604668 -143025482 + CT-rich Low_complexity Low_complexity 2 43 0 1285 142 18 0 chr5 56604676 56604894 -143025256 + MSTA LTR MaLR 207 428 0 376 309 95 12 chr5 56604894 56605062 -143025088 + MIR SINE MIR 81 262 0 385 160 0 21 chr5 56606052 56606146 -143024004 + (TCCA)n Simple_repeat Simple_repeat 2 93 0 2346 93 7 0 chr5 56606427 56606729 -143023421 - AluSx SINE Alu -8 304 1 1840 158 65 0 chr5 56606876 56607198 -143022952 - MER2 DNA MER2_type 0 344 2 204 365 10 21 chr5 56607405 56607501 -143022649 + L2 LINE L2 2712 2806 -508 193 352 131 14 chr5 56607568 56607713 -143022437 + L2 LINE L2 2920 3081 -191 376 240 8 76 chr5 56607762 56607918 -143022232 + MER5A DNA MER1_type 4 160 -28 22405 132 55 19 chr5 56607939 56610884 -143019266 - L1PA8A LINE L1 -5 6441 3602 3497 198 23 81 chr5 56610884 56611912 -143018238 + LTR5 LTR ERVK 1 969 0 22405 132 55 19 chr5 56611912 56615114 -143015036 - L1PA8A LINE L1 -2844 3602 1 672 218 154 0 chr5 56615160 56615316 -143014834 + MER5A DNA MER1_type 10 189 0 315 176 0 59 chr5 56615448 56615533 -143014617 + MER116 DNA Mariner 1 80 0 217 307 27 40 chr5 56615533 56615608 -143014542 - MIR SINE MIR -183 79 6 192 111 0 0 chr5 56617371 56617407 -143012743 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 2403 159 37 20 chr5 56617892 56618351 -143011799 + MLT1C LTR MaLR 1 467 0 272 321 107 0 chr5 56619154 56619266 -143010884 - LTR33A LTR ERVL -273 250 127 262 0 0 0 chr5 56619272 56619302 -143010848 + MLT1B LTR MaLR 361 390 0 1736 167 88 107 chr5 56619495 56619841 -143010309 - MLT1D LTR MaLR -1 504 170 1016 79 0 0 chr5 56619841 56619981 -143010169 - L1PA6 LINE L1 -3 6151 6012 1736 167 88 107 chr5 56619981 56620148 -143010002 - MLT1D LTR MaLR -335 170 1 1647 179 58 3 chr5 56620280 56620571 -143009579 - AluJb SINE Alu -5 307 1 384 22 0 0 chr5 56620885 56620930 -143009220 + (TG)n Simple_repeat Simple_repeat 2 46 0 2140 108 164 13 chr5 56621630 56622002 -143008148 + MSTA LTR MaLR 1 428 0 414 0 0 0 chr5 56622439 56622485 -143007665 + (TG)n Simple_repeat Simple_repeat 1 46 0 201 39 0 0 chr5 56622490 56622516 -143007634 + (GA)n Simple_repeat Simple_repeat 1 26 0 920 93 19 25 chr5 56623422 56623583 -143006567 - L1MB2 LINE L1 0 6171 6012 2086 192 61 11 chr5 56623585 56624326 -143005824 - L1M4 LINE L1 -455 5719 4936 350 308 39 103 chr5 56624864 56625254 -143004896 + HAL1 LINE L1 833 1197 -1310 * 363 330 108 11 chr5 56625242 56625427 -143004723 + HAL1 LINE L1 1560 1762 -745 2429 319 122 32 chr5 56625438 56627057 -143003093 + L2 LINE L2 331 2094 -1220 284 250 0 23 chr5 56627082 56627170 -143002980 + ERVL LTR ERVL 4474 4559 -1205 1167 321 26 51 chr5 56627228 56628123 -143002027 - ERVL LTR ERVL -338 5426 4555 503 315 161 20 chr5 56628296 56628588 -143001562 + L2 LINE L2 2980 3312 -1 998 225 9 4 chr5 56628682 56628909 -143001241 + MSTB1 LTR MaLR 205 432 0 2489 256 99 45 chr5 56629120 56630422 -142999728 + HAL1 LINE L1 3 1375 -1132 503 295 105 48 chr5 56630665 56631170 -142998980 + L1ME LINE L1 5269 5802 -319 638 289 42 31 chr5 56631999 56632286 -142997864 + LTR33 LTR ERVL 1 290 -231 558 280 28 11 chr5 56632396 56632576 -142997574 + MIR SINE MIR 54 235 -27 674 297 135 27 chr5 56633052 56633422 -142996728 + MLT1J LTR MaLR 4 413 -98 21 0 0 0 chr5 56634502 56634523 -142995627 + AT_rich Low_complexity Low_complexity 1 21 0 2553 52 3 0 chr5 56634902 56635210 -142994940 + AluY SINE Alu 1 309 -2 641 268 121 5 chr5 56635218 56635442 -142994708 + MIR SINE MIR 8 257 -5 296 255 96 0 chr5 56636137 56636231 -142993919 + MIR SINE MIR 110 212 -50 1785 131 16 6 chr5 56637081 56637401 -142992749 - L1MA8 LINE L1 -53 6238 5916 826 207 18 0 chr5 56638523 56638692 -142991458 - MIR SINE MIR -1 261 90 21 36 0 0 chr5 56639396 56639424 -142990726 + AT_rich Low_complexity Low_complexity 1 28 0 321 285 127 55 chr5 56639730 56639895 -142990255 - MIR SINE MIR -66 196 20 573 286 102 45 chr5 56640138 56640159 -142989991 - LTR16A LTR ERVL -10 440 422 1688 155 188 6 chr5 56640159 56640521 -142989629 + MSTA LTR MaLR 1 428 0 573 286 102 45 chr5 56640521 56640901 -142989249 - LTR16A LTR ERVL -28 422 16 504 199 50 8 chr5 56641119 56641259 -142988891 - L1MD3 LINE L1 -3 8036 7883 371 298 91 8 chr5 56641336 56641457 -142988693 + MIR SINE MIR 19 149 -113 210 352 117 16 chr5 56641535 56641663 -142988487 + L2 LINE L2 3122 3262 -10 4418 145 20 25 chr5 56643874 56644703 -142985447 - L1PA16 LINE L1 -17 6149 5325 22 0 0 0 chr5 56644730 56644752 -142985398 + AT_rich Low_complexity Low_complexity 1 22 0 282 333 80 56 chr5 56644764 56644926 -142985224 - L2 LINE L2 -5 3267 3102 2050 172 79 55 chr5 56645009 56645502 -142984648 - MLT1D LTR MaLR 0 505 1 581 301 91 60 chr5 56646346 56646928 -142983222 + MLT1L LTR MaLR 8 607 -8 1150 205 63 10 chr5 56647349 56647651 -142982499 - MER33 DNA MER1_type -6 318 1 24 0 0 0 chr5 56647853 56647877 -142982273 + AT_rich Low_complexity Low_complexity 1 24 0 821 337 102 38 chr5 56647963 56648775 -142981375 + L2 LINE L2 1876 2739 -575 1147 124 57 10 chr5 56648793 56648986 -142981164 - L1PA10 LINE L1 -11 6157 5956 202 233 23 47 chr5 56649056 56649142 -142981008 + L2 LINE L2 2912 2995 -277 1405 176 53 23 chr5 56649149 56649546 -142980604 - Charlie1 DNA MER1_type -1 2760 2352 1021 186 57 111 chr5 56649546 56649932 -142980218 - MLT1B LTR MaLR -2 388 24 243 292 45 22 chr5 56650016 56650105 -142980045 + L2 LINE L2 2999 3089 -183 25 0 0 0 chr5 56650295 56650320 -142979830 + AT_rich Low_complexity Low_complexity 1 25 0 1762 112 29 49 chr5 56651536 56651884 -142978266 + THE1C LTR MaLR 1 425 -32 7451 39 0 0 chr5 56651991 56653099 -142977051 + L1PA5 LINE L1 5042 6149 -5 526 253 57 13 chr5 56653325 56653483 -142976667 - MIR SINE MIR -76 186 22 211 307 180 7 chr5 56653885 56654035 -142976115 - MIR SINE MIR -2 260 85 281 44 67 0 chr5 56654793 56654838 -142975312 + T-rich Low_complexity Low_complexity 1 48 0 349 267 79 10 chr5 56655228 56655329 -142974821 - MIR3 SINE MIR -6 202 95 195 268 27 20 chr5 56655437 56655545 -142974605 - MER5A DNA MER1_type 0 178 43 186 68 0 68 chr5 56656009 56656053 -142974097 + (GGAGA)n Simple_repeat Simple_repeat 3 43 0 323 118 0 0 chr5 56656483 56656534 -142973616 - MER53 DNA DNA -138 51 1 500 295 40 12 chr5 56656699 56656872 -142973278 - MER5B DNA MER1_type 0 178 1 1274 231 25 42 chr5 56657147 56657549 -142972601 - MLT2C1 LTR ERVL -2 395 1 1692 145 7 0 chr5 56658188 56658478 -142971672 + L1MA4 LINE L1 5998 6289 -11 208 282 82 12 chr5 56658557 56658642 -142971508 + MIR3 SINE MIR 112 202 -6 267 217 0 17 chr5 56658829 56658889 -142971261 + MER94 DNA DNA 18 76 -58 2099 70 3 11 chr5 56658890 56659176 -142970974 + L1PA8 LINE L1 5889 6172 0 204 314 47 0 chr5 56659437 56659523 -142970627 - L2 LINE L2 -650 2664 2575 826 205 78 0 chr5 56660862 56661028 -142969122 - AluJb SINE Alu -3 309 131 1860 162 102 52 chr5 56661386 56661867 -142968283 - MLT1D LTR MaLR 0 505 1 2368 57 0 3 chr5 56661894 56662195 -142967955 + AluY SINE Alu 1 300 -11 381 327 6 19 chr5 56662936 56663092 -142967058 + CT-rich Low_complexity Low_complexity 1 154 0 939 235 35 0 chr5 56663911 56664111 -142966039 + MIR SINE MIR 23 229 -33 327 315 83 33 chr5 56664264 56664445 -142965705 - L1ME1 LINE L1 -253 5913 5724 269 307 53 9 chr5 56664474 56664588 -142965562 - L1ME1 LINE L1 -523 5639 5521 21 0 0 0 chr5 56664651 56664672 -142965478 + AT_rich Low_complexity Low_complexity 1 21 0 2295 101 0 0 chr5 56665758 56666054 -142964096 + AluSx SINE Alu 1 296 -16 294 225 0 0 chr5 56666383 56666463 -142963687 + GA-rich Low_complexity Low_complexity 3 82 0 250 258 90 11 chr5 56667363 56667452 -142962698 - MLT1H LTR MaLR -362 187 92 213 39 0 0 chr5 56667688 56667714 -142962436 + (TA)n Simple_repeat Simple_repeat 2 27 0 226 272 12 25 chr5 56667808 56667889 -142962261 + GA-rich Low_complexity Low_complexity 1 80 0 525 320 112 61 chr5 56668540 56668807 -142961343 - L2 LINE L2 -3 3269 3017 2492 74 0 0 chr5 56668807 56669116 -142961034 + AluY SINE Alu 1 309 -2 525 320 112 61 chr5 56669116 56669618 -142960532 - L2 LINE L2 -255 3017 2458 276 321 98 31 chr5 56670364 56670557 -142959593 + L3 LINE CR1 1371 1576 -1 679 206 40 65 chr5 56672072 56672271 -142957879 + MLT1A1 LTR MaLR 1 194 -171 4873 208 55 43 chr5 56672312 56674307 -142955843 + L1ME3 LINE L1 627 2782 -3644 295 208 31 10 chr5 56674300 56674396 -142955754 + L1ME3 LINE L1 4578 4675 -1751 * 2431 78 3 10 chr5 56674491 56674799 -142955351 - AluSp SINE Alu -7 306 1 195 313 109 8 chr5 56674943 56675071 -142955079 + L3b LINE CR1 1135 1275 -308 21 0 0 0 chr5 56676068 56676089 -142954061 + AT_rich Low_complexity Low_complexity 1 21 0 180 111 0 0 chr5 56676318 56676345 -142953805 + (GA)n Simple_repeat Simple_repeat 1 27 0 300 330 48 8 chr5 56676588 56676732 -142953418 - MIR SINE MIR -43 165 15 226 206 23 38 chr5 56677513 56677644 -142952506 + GA-rich Low_complexity Low_complexity 3 131 0 503 277 102 28 chr5 56678520 56678697 -142951453 + MIR3 SINE MIR 16 205 -3 22 35 0 0 chr5 56681636 56681665 -142948485 + AT_rich Low_complexity Low_complexity 1 29 0 944 192 146 24 chr5 56682820 56683145 -142947005 + MLT1G3 LTR MaLR 160 562 0 405 391 81 16 chr5 56683596 56683918 -142946232 - L2 LINE L2 -12 3260 2918 211 186 51 0 chr5 56684048 56684107 -142946043 + (CAAA)n Simple_repeat Simple_repeat 3 64 0 540 319 62 32 chr5 56684177 56685141 -142945009 + L1ME3 LINE L1 5166 6161 -281 713 132 0 0 chr5 56688452 56688566 -142941584 - L1PB1 LINE L1 0 6151 6038 290 321 55 9 chr5 56688622 56688731 -142941419 + MIR3 SINE MIR 67 180 -28 844 221 17 69 chr5 56688901 56689053 -142941097 + MER58A DNA MER1_type 6 143 -2277 569 174 219 0 chr5 56689053 56689208 -142940942 - MER53 DNA DNA 0 189 1 844 221 17 69 chr5 56689208 56689286 -142940864 + MER58A DNA MER1_type 143 224 0 245 296 151 66 chr5 56689290 56689442 -142940708 + MIR SINE MIR 21 185 -77 352 259 24 0 chr5 56690698 56690783 -142939367 + MIR SINE MIR 30 116 -92 382 286 137 26 chr5 56691843 56692070 -142938080 - L2 LINE L2 -954 2360 2109 959 198 5 20 chr5 56692421 56692623 -142937527 + MER20 DNA MER1_type 3 201 -18 712 342 80 24 chr5 56692657 56693110 -142937040 - L2 LINE L2 -571 2743 2266 252 264 158 12 chr5 56693161 56693305 -142936845 + MIR3 SINE MIR 5 162 -46 239 293 13 0 chr5 56694688 56694763 -142935387 - MLT1K LTR MaLR -25 563 488 7415 35 4 0 chr5 56694784 56696054 -142934096 - L1PA4 LINE L1 0 6155 4921 1309 208 111 15 chr5 56696087 56696505 -142933645 + MLT1F LTR MaLR 64 540 -2 353 313 92 69 chr5 56696505 56696975 -142933175 - MLT1K LTR MaLR -95 493 13 504 284 58 73 chr5 56697397 56697463 -142932687 - MIR SINE MIR 0 262 197 450 201 111 123 chr5 56697463 56697517 -142932633 - MLT2C1 LTR ERVL -3 394 341 275 71 24 0 chr5 56697517 56697559 -142932591 + (CA)n Simple_repeat Simple_repeat 2 44 0 450 201 111 123 chr5 56697559 56697901 -142932249 - MLT2C1 LTR ERVL -56 341 3 504 284 58 73 chr5 56697901 56698095 -142932055 - MIR SINE MIR -65 197 6 404 294 164 7 chr5 56698830 56698976 -142931174 + MER5A DNA MER1_type 9 177 -12 2381 87 0 0 chr5 56699031 56699330 -142930820 - AluSg1 SINE Alu -10 299 1 196 184 0 0 chr5 56701690 56701728 -142928422 - L2 LINE L2 -3 3310 3273 429 327 0 6 chr5 56701768 56701927 -142928223 - LTR16A1 LTR ERVL 0 457 300 3523 262 59 58 chr5 56702043 56702301 -142927849 + HAL1 LINE L1 823 1079 -1428 2023 174 55 24 chr5 56702301 56702716 -142927434 + MSTA LTR MaLR 1 428 0 3523 262 59 58 chr5 56702716 56704128 -142926022 + HAL1 LINE L1 1079 2495 -12 219 269 0 30 chr5 56704577 56704644 -142925506 + CT-rich Low_complexity Low_complexity 4 68 0 21 0 0 0 chr5 56705869 56705890 -142924260 + AT_rich Low_complexity Low_complexity 1 21 0 272 246 0 0 chr5 56705911 56705968 -142924182 + ERVL LTR ERVL 1702 1758 -3265 448 356 58 25 chr5 56706109 56706662 -142923488 + ERVL LTR ERVL 3230 3800 -1964 216 232 0 54 chr5 56707089 56707145 -142923005 + polypurine Low_complexity Low_complexity 4 56 0 235 32 0 0 chr5 56707159 56707190 -142922960 + HSMAR1 DNA Mariner 1 31 -1256 311 360 48 16 chr5 56707554 56707743 -142922407 + L3b LINE CR1 1292 1486 -97 183 299 63 39 chr5 56708724 56708851 -142921299 + L2 LINE L2 2827 2956 -316 448 284 63 54 chr5 56709052 56709326 -142920824 + L2 LINE L2 2988 3313 0 485 257 9 0 chr5 56709681 56709794 -142920356 - MER81 DNA DNA 0 114 1 188 256 140 55 chr5 56710318 56710482 -142919668 + L2 LINE L2 3133 3310 -3 486 237 30 0 chr5 56710637 56710772 -142919378 - MER103 DNA DNA -21 145 7 4650 175 22 21 chr5 56710889 56711899 -142918251 - L1MB1 LINE L1 -5 6163 5152 3599 181 6 3 chr5 56711911 56712596 -142917554 + L1 LINE L1 4431 5117 -1029 455 184 34 109 chr5 56712615 56712762 -142917388 + MER46C DNA MER2_type 80 215 -123 425 218 99 0 chr5 56714017 56714118 -142916032 + FLAM_A SINE Alu 26 136 -6 2119 114 10 0 chr5 56715292 56715581 -142914569 + AluSx SINE Alu 1 292 -20 450 326 69 32 chr5 56715838 56716215 -142913935 + ERVL LTR ERVL 4855 5245 -519 239 304 25 0 chr5 56716627 56716706 -142913444 + LTR67 LTR ERVL 1 81 -476 458 275 132 22 chr5 56716845 56717027 -142913123 + LTR67 LTR ERVL 328 529 -28 2406 75 0 0 chr5 56717470 56717763 -142912387 + AluY SINE Alu 1 293 -18 228 299 119 10 chr5 56718292 56718493 -142911657 + L2 LINE L2 2832 3054 -218 276 207 86 0 chr5 56718496 56718554 -142911596 + L2 LINE L2 3210 3272 0 222 274 0 20 chr5 56719052 56719103 -142911047 + MIR3 SINE MIR 15 64 -144 242 308 48 10 chr5 56719548 56719652 -142910498 - 7SK RNA RNA -68 125 18 1345 239 163 21 chr5 56719891 56719980 -142910170 + L1MC4 LINE L1 6734 6809 -1233 1327 229 48 7 chr5 56719980 56720273 -142909877 + AluJo SINE Alu 2 306 -6 1345 239 163 21 chr5 56720273 56721072 -142909078 + L1MC4 LINE L1 6809 7881 -161 225 0 0 0 chr5 56721098 56721123 -142909027 + (TG)n Simple_repeat Simple_repeat 2 26 0 339 295 21 11 chr5 56722328 56722649 -142907501 + MLT1J2 LTR MaLR 28 409 0 262 305 84 0 chr5 56722649 56722744 -142907406 - L2 LINE L2 -27 3286 3184 408 331 82 25 chr5 56723213 56723852 -142906298 - L1M4 LINE L1 -1094 5052 4377 3880 255 103 44 chr5 56723960 56724107 -142906043 + L1MC4a LINE L1 5517 5654 -2154 2365 162 19 21 chr5 56724107 56724539 -142905611 + Tigger2a DNA MER2_type 3 433 -1 3880 255 103 44 chr5 56724539 56726095 -142904055 + L1MC4a LINE L1 5654 7320 -488 1347 234 127 8 chr5 56726098 56726500 -142903650 + L1MC4 LINE L1 7451 7900 -142 768 35 41 47 chr5 56726549 56726720 -142903430 + (TAGA)n Simple_repeat Simple_repeat 3 172 0 1792 156 30 51 chr5 56726720 56726944 -142903206 - MLT1A1 LTR MaLR -1 364 150 2141 115 80 15 chr5 56726944 56727282 -142902868 - THE1B LTR MaLR 0 364 5 1792 156 30 51 chr5 56727282 56727428 -142902722 - MLT1A1 LTR MaLR -215 150 2 340 20 41 0 chr5 56727428 56727477 -142902673 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 21 36 0 0 chr5 56727478 56727506 -142902644 + AT_rich Low_complexity Low_complexity 1 28 0 448 207 16 0 chr5 56727506 56727613 -142902537 + L1MC4 LINE L1 7671 8038 -2 256 340 105 13 chr5 56727712 56727865 -142902285 + MIR3 SINE MIR 1 167 -41 315 277 34 78 chr5 56728075 56728281 -142901869 - L2 LINE L2 -210 3062 2866 198 254 18 55 chr5 56728464 56728519 -142901631 + L2 LINE L2 3213 3265 -7 3842 142 52 34 chr5 56730919 56731633 -142898517 + LTR8A LTR ERV1 1 727 0 212 309 134 31 chr5 56732725 56732822 -142897328 + L2 LINE L2 3149 3255 -17 183 184 0 0 chr5 56735640 56735678 -142894472 + (TTG)n Simple_repeat Simple_repeat 2 39 0 291 263 83 23 chr5 56736083 56736216 -142893934 + Charlie7 DNA MER1_type 7 147 -2465 696 292 63 12 chr5 56736291 56736623 -142893527 + Charlie7 DNA MER1_type 288 636 -1976 422 207 153 13 chr5 56736625 56736775 -142893375 + Charlie7 DNA MER1_type 1618 1788 -824 5046 122 5 28 chr5 56736777 56737594 -142892556 + L1PA16 LINE L1 5369 6166 0 674 249 80 80 chr5 56737614 56738103 -142892047 + Charlie7 DNA MER1_type 1786 2274 -338 1757 237 55 100 chr5 56738304 56739673 -142890477 + L1MC5 LINE L1 6620 7926 -35 23 54 0 0 chr5 56739693 56739730 -142890420 + AT_rich Low_complexity Low_complexity 1 37 0 465 317 144 18 chr5 56741065 56741447 -142888703 - MLT1K LTR MaLR -13 575 146 26 50 0 0 chr5 56742179 56742219 -142887931 + AT_rich Low_complexity Low_complexity 1 40 0 183 80 0 0 chr5 56743469 56743494 -142886656 + (A)n Simple_repeat Simple_repeat 1 25 0 839 171 11 59 chr5 56745787 56745974 -142884176 + MER5B DNA MER1_type 1 178 0 21 0 0 0 chr5 56746390 56746411 -142883739 + AT_rich Low_complexity Low_complexity 1 21 0 274 326 138 7 chr5 56746440 56746744 -142883406 + L1MC/D LINE L1 5417 5760 -2048 210 162 0 0 chr5 56748472 56748509 -142881641 + (TTA)n Simple_repeat Simple_repeat 3 39 0 843 264 68 14 chr5 56748830 56749125 -142881025 - LTR16A LTR ERVL -20 430 120 736 296 119 6 chr5 56749205 56749567 -142880583 - LTR33 LTR ERVL -118 403 1 2849 122 16 20 chr5 56749682 56750132 -142880018 + MER83 LTR ERV1 1 448 0 21 100 0 0 chr5 56750305 56750375 -142879775 + AT_rich Low_complexity Low_complexity 1 70 0 365 314 23 103 chr5 56750745 56751134 -142879016 + L2 LINE L2 2288 2645 -669 212 305 17 0 chr5 56751274 56751333 -142878817 - MIR SINE MIR 0 262 203 30 0 0 0 chr5 56751378 56751408 -142878742 + AT_rich Low_complexity Low_complexity 1 30 0 363 346 106 71 chr5 56751497 56751922 -142878228 + L2 LINE L2 2827 3266 -6 2334 106 0 3 chr5 56751955 56752267 -142877883 + AluY SINE Alu 1 311 0 300 247 141 94 chr5 56752383 56752553 -142877597 + MER5B DNA MER1_type 1 178 0 281 313 98 0 chr5 56753773 56753885 -142876265 - L2 LINE L2 -12 3260 3138 2050 116 11 0 chr5 56753919 56754228 -142875922 + AluSg SINE Alu 1 312 0 219 289 231 25 chr5 56754849 56754970 -142875180 - MER5A DNA MER1_type -6 183 38 311 154 15 0 chr5 56755265 56755330 -142874820 + (CA)n Simple_repeat Simple_repeat 1 66 0 24 0 0 0 chr5 56755384 56755408 -142874742 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 56755428 56755452 -142874698 + AT_rich Low_complexity Low_complexity 1 24 0 1381 233 39 20 chr5 56755497 56755887 -142874263 + MLT2D LTR ERVL 6 402 -12 1791 161 46 38 chr5 56756089 56756461 -142873689 - THE1C LTR MaLR 0 375 1 2265 103 3 3 chr5 56756552 56756854 -142873296 - AluSx SINE Alu -10 302 1 249 399 98 24 chr5 56757173 56757582 -142872568 + L2 LINE L2 2811 3249 -23 518 250 168 84 chr5 56758514 56759014 -142871136 + MLT1F LTR MaLR 1 542 0 309 217 48 36 chr5 56759969 56760052 -142870098 + L2 LINE L2 3188 3271 -1 219 139 0 0 chr5 56760112 56760148 -142870002 + (TA)n Simple_repeat Simple_repeat 1 36 0 1611 240 106 49 chr5 56760978 56761570 -142868580 - MLT1E2 LTR MaLR 0 626 1 673 324 92 27 chr5 56761639 56762009 -142868141 - MLT1J2 LTR MaLR -30 416 23 2014 143 0 7 chr5 56762844 56763182 -142866968 - AluSx SINE Alu 0 336 1 562 188 346 13 chr5 56765584 56765818 -142864332 + MER5C DNA MER1_type 8 319 -5 270 277 36 36 chr5 56765963 56766129 -142864021 - LTR16B LTR ERVL -10 454 289 1748 166 47 25 chr5 56766136 56766497 -142863653 + THE1C LTR MaLR 7 375 0 662 304 57 20 chr5 56766497 56766792 -142863358 - LTR16B LTR ERVL -158 306 1 1412 242 55 29 chr5 56769361 56770517 -142859633 + L1M4 LINE L1 3727 5109 -1037 1584 131 86 37 chr5 56770712 56771062 -142859088 + THE1C LTR MaLR 2 368 -7 471 299 51 11 chr5 56771318 56771495 -142858655 - MIR SINE MIR -3 259 76 429 314 38 11 chr5 56772760 56772945 -142857205 - MER115 DNA AcHobo -494 199 10 460 302 138 13 chr5 56774203 56774428 -142855722 - MIR SINE MIR 0 262 10 586 270 79 60 chr5 56774798 56775286 -142854864 + MLT1H LTR MaLR 56 549 0 1636 88 0 9 chr5 56776623 56776849 -142853301 + L1PA8 LINE L1 5949 6172 0 228 191 0 0 chr5 56777561 56777603 -142852547 - MIR SINE MIR -3 259 218 725 271 87 4 chr5 56778372 56778638 -142851512 + LTR33 LTR ERVL 234 521 0 267 304 88 54 chr5 56778994 56779109 -142851041 + MIR SINE MIR 2 125 -137 1647 216 25 11 chr5 56779109 56779475 -142850675 + MLT1A2 LTR MaLR 4 374 0 267 304 88 54 chr5 56779475 56779507 -142850643 + MIR SINE MIR 125 154 -108 571 291 61 9 chr5 56779507 56779720 -142850430 + MIR SINE MIR 39 262 0 26 30 0 0 chr5 56780515 56780548 -142849602 + AT_rich Low_complexity Low_complexity 1 33 0 258 276 40 0 chr5 56780560 56780636 -142849514 + GA-rich Low_complexity Low_complexity 6 84 0 199 312 65 21 chr5 56781116 56781209 -142848941 - L2 LINE L2 -217 3055 2959 4230 99 13 20 chr5 56781288 56781923 -142848227 + L1PA12 LINE L1 5524 6153 -15 615 309 71 40 chr5 56781986 56782310 -142847840 - MLT1J LTR MaLR -73 438 105 22 35 0 0 chr5 56782865 56782894 -142847256 + AT_rich Low_complexity Low_complexity 1 29 0 15023 130 19 3 chr5 56782897 56785276 -142844874 - Tigger1 DNA MER2_type 0 2418 2 2201 104 21 0 chr5 56785436 56785772 -142844378 + L1MA2 LINE L1 5962 6304 0 22 35 0 0 chr5 56786006 56786035 -142844115 + AT_rich Low_complexity Low_complexity 1 29 0 352 255 195 20 chr5 56786439 56786588 -142843562 + MIR3 SINE MIR 26 200 -8 369 358 43 26 chr5 56788821 56789477 -142840673 + L1M2 LINE L1 21 1952 -5257 593 316 21 31 chr5 56789536 56789862 -142840288 + L1PBb LINE L1 49 371 -5833 491 287 66 6 chr5 56789984 56790165 -142839985 + L1PBb LINE L1 368 559 -5645 868 200 0 6 chr5 56790221 56790391 -142839759 + L1PBb LINE L1 742 910 -5293 * 1982 225 25 41 chr5 56790384 56791281 -142838869 + L1PB4 LINE L1 690 1672 -4531 1868 100 0 0 chr5 56791284 56791554 -142838596 + L1PA13 LINE L1 5499 5768 -395 2681 91 0 13 chr5 56791623 56792007 -142838143 + L1PA13 LINE L1 5781 6159 -4 2139 238 7 14 chr5 56792172 56792730 -142837420 + L1PB4 LINE L1 1663 2216 -3987 784 75 8 25 chr5 56792737 56792857 -142837293 + MER30 DNA MER1_type 1 118 -112 11951 199 14 24 chr5 56792873 56792891 -142837259 + L1PB4 LINE L1 2433 2450 -3763 1904 153 129 8 chr5 56792891 56793271 -142836879 + MSTA LTR MaLR 1 426 -2 11951 199 14 24 chr5 56793271 56795210 -142834940 + L1PB4 LINE L1 2450 4333 -1880 1913 112 14 44 chr5 56795210 56795505 -142834645 - AluY SINE Alu -10 301 16 11951 199 14 24 chr5 56795505 56797367 -142832783 + L1PB4 LINE L1 4333 6213 0 281 399 63 6 chr5 56797538 56797696 -142832454 - MIR3 SINE MIR -26 182 16 641 50 0 0 chr5 56797828 56797908 -142832242 - MADE1 DNA Mariner 0 80 1 216 232 0 54 chr5 56797921 56797977 -142832173 + polypyrimidine Low_complexity Low_complexity 4 56 0 293 339 65 21 chr5 56798400 56798953 -142831197 - MER70-int LTR ERVL -1964 3800 3230 253 246 0 0 chr5 56799094 56799151 -142830999 - MER70-int LTR ERVL -3265 1758 1702 21 0 0 0 chr5 56799172 56799193 -142830957 + AT_rich Low_complexity Low_complexity 1 21 0 219 269 0 30 chr5 56800418 56800485 -142829665 + GA-rich Low_complexity Low_complexity 4 68 0 3075 263 59 58 chr5 56800934 56802346 -142827804 - HAL1 LINE L1 -12 2495 1079 2017 174 55 24 chr5 56802346 56802761 -142827389 - MSTA LTR MaLR 0 428 1 3075 263 59 58 chr5 56802761 56803019 -142827131 - HAL1 LINE L1 -1428 1079 823 374 322 0 7 chr5 56803135 56803284 -142826866 + LTR16A1 LTR ERVL 300 447 -10 193 184 0 0 chr5 56803334 56803372 -142826778 + L2 LINE L2 3273 3310 -3 2389 87 0 0 chr5 56805732 56806030 -142824120 + AluSg1 SINE Alu 1 298 -11 409 294 164 7 chr5 56806085 56806231 -142823919 - MER5A DNA MER1_type -12 177 9 504 284 58 73 chr5 56806966 56807160 -142822990 + MIR SINE MIR 6 197 -65 413 204 111 123 chr5 56807160 56807502 -142822648 + MLT2C1 LTR ERVL 3 341 -56 275 71 24 0 chr5 56807502 56807544 -142822606 + (TG)n Simple_repeat Simple_repeat 2 44 0 413 204 111 123 chr5 56807544 56807598 -142822552 + MLT2C1 LTR ERVL 341 394 -3 504 284 58 73 chr5 56807598 56807664 -142822486 + MIR SINE MIR 197 262 0 287 358 17 28 chr5 56808376 56808555 -142821595 + MLT1K LTR MaLR 312 488 -100 1185 208 111 15 chr5 56808556 56808974 -142821176 - MLT1F LTR MaLR -2 540 64 7461 33 1 4 chr5 56809007 56810281 -142819869 + L1PA4 LINE L1 4921 6155 0 251 264 158 12 chr5 56811760 56811904 -142818246 - MIR3 SINE MIR -46 162 5 717 342 80 24 chr5 56811955 56812408 -142817742 + L2 LINE L2 2266 2743 -571 896 203 5 20 chr5 56812442 56812644 -142817506 - MER20 DNA MER1_type -18 201 3 382 286 137 26 chr5 56812995 56813222 -142816928 + L2 LINE L2 2109 2360 -954 351 259 24 0 chr5 56814282 56814367 -142815783 - MIR SINE MIR -92 116 30 245 296 151 66 chr5 56815623 56815775 -142814375 - MIR SINE MIR -77 185 21 844 221 17 69 chr5 56815779 56815857 -142814293 - MER58A DNA MER1_type -2196 224 143 585 168 219 0 chr5 56815857 56816012 -142814138 + MER53 DNA DNA 1 189 0 844 221 17 69 chr5 56816012 56816164 -142813986 - MER58A DNA MER1_type -2277 143 6 290 321 55 9 chr5 56816334 56816443 -142813707 - MIR3 SINE MIR -28 180 67 713 132 0 0 chr5 56816499 56816613 -142813537 + L1PB1 LINE L1 6038 6151 0 555 318 62 32 chr5 56819924 56820888 -142809262 - L1ME3 LINE L1 -281 6161 5166 203 210 16 16 chr5 56820958 56821020 -142809130 + (TTTG)n Simple_repeat Simple_repeat 3 64 0 405 391 81 16 chr5 56821150 56821472 -142808678 + L2 LINE L2 2918 3260 -12 944 192 146 24 chr5 56821923 56822248 -142807902 - MLT1G3 LTR MaLR 0 530 160 22 35 0 0 chr5 56823404 56823433 -142806717 + AT_rich Low_complexity Low_complexity 1 29 0 503 277 102 28 chr5 56826372 56826549 -142803601 - MIR3 SINE MIR -3 205 16 226 206 23 38 chr5 56827425 56827556 -142802594 + CT-rich Low_complexity Low_complexity 3 131 0 300 330 48 8 chr5 56828337 56828481 -142801669 + MIR SINE MIR 15 165 -43 180 111 0 0 chr5 56828724 56828751 -142801399 + (TC)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr5 56828980 56829001 -142801149 + AT_rich Low_complexity Low_complexity 1 21 0 195 313 109 8 chr5 56829998 56830126 -142800024 - L3b LINE CR1 -308 1275 1135 2431 78 3 10 chr5 56830270 56830578 -142799572 + AluSp SINE Alu 1 306 -7 295 208 31 10 chr5 56830673 56830769 -142799381 - L1ME3 LINE L1 -1751 4675 4578 * 4881 180 64 33 chr5 56830762 56832757 -142797393 - L1ME3 LINE L1 -3644 2782 627 679 206 40 65 chr5 56832798 56832997 -142797153 - MLT1A1 LTR MaLR -171 194 1 276 321 98 31 chr5 56834512 56834705 -142795445 - L3 LINE CR1 -1 1576 1371 525 320 112 61 chr5 56835451 56835953 -142794197 + L2 LINE L2 2458 3017 -255 2501 74 0 0 chr5 56835953 56836263 -142793887 - AluY SINE Alu -1 310 1 525 320 112 61 chr5 56836263 56836530 -142793620 + L2 LINE L2 3017 3269 -3 226 272 12 25 chr5 56837181 56837262 -142792888 + CT-rich Low_complexity Low_complexity 1 80 0 213 39 0 0 chr5 56837356 56837382 -142792768 + (TA)n Simple_repeat Simple_repeat 2 27 0 250 258 90 11 chr5 56837618 56837707 -142792443 + MLT1H LTR MaLR 92 187 -362 294 225 0 0 chr5 56838607 56838687 -142791463 + CT-rich Low_complexity Low_complexity 3 82 0 2295 101 0 0 chr5 56839016 56839312 -142790838 - AluSx SINE Alu -16 296 1 21 0 0 0 chr5 56840396 56840417 -142789733 + AT_rich Low_complexity Low_complexity 1 21 0 269 307 53 9 chr5 56840480 56840594 -142789556 + L1ME1 LINE L1 5521 5639 -523 327 315 83 33 chr5 56840623 56840804 -142789346 + L1ME1 LINE L1 5724 5913 -253 939 235 35 0 chr5 56840957 56841157 -142788993 - MIR SINE MIR -33 229 23 381 327 6 19 chr5 56841976 56842132 -142788018 + GA-rich Low_complexity Low_complexity 1 154 0 2381 57 0 3 chr5 56842873 56843174 -142786976 - AluY SINE Alu -11 300 1 1864 162 102 52 chr5 56843201 56843682 -142786468 + MLT1D LTR MaLR 1 505 0 826 205 78 0 chr5 56844040 56844206 -142785944 + AluJb SINE Alu 131 309 -3 204 314 47 0 chr5 56845545 56845631 -142784519 + L2 LINE L2 2575 2664 -650 2099 70 3 11 chr5 56845892 56846178 -142783972 - L1PA8 LINE L1 0 6172 5889 267 217 0 17 chr5 56846179 56846239 -142783911 - MER94 DNA DNA -58 76 18 208 282 82 12 chr5 56846426 56846511 -142783639 - MIR3 SINE MIR -6 202 112 1692 145 7 0 chr5 56846590 56846880 -142783270 - L1MA4 LINE L1 -11 6289 5998 1274 231 25 42 chr5 56847519 56847921 -142782229 + MLT2C1 LTR ERVL 1 395 -2 500 295 40 12 chr5 56848196 56848369 -142781781 + MER5B DNA MER1_type 1 178 0 323 118 0 0 chr5 56848534 56848585 -142781565 + MER53 DNA DNA 1 51 -138 186 68 0 68 chr5 56849015 56849059 -142781091 + (TCTCC)n Simple_repeat Simple_repeat 3 43 0 195 268 27 20 chr5 56849523 56849631 -142780519 + MER5A DNA MER1_type 43 178 0 349 267 79 10 chr5 56849739 56849840 -142780310 + MIR3 SINE MIR 95 202 -6 281 44 67 0 chr5 56850229 56850274 -142779876 + A-rich Low_complexity Low_complexity 1 48 0 202 236 14 83 chr5 56850883 56850955 -142779195 - MER5B DNA MER1_type -111 67 1 297 235 106 0 chr5 56851013 56851098 -142779052 + L2 LINE L2 3142 3235 -37 4359 62 4 0 chr5 56852717 56853269 -142776881 + MER41A LTR ERV1 1 554 0 206 259 69 0 chr5 56856283 56856341 -142773809 - L2 LINE L2 -4 3268 3207 365 320 32 32 chr5 56856457 56856582 -142773568 + L2 LINE L2 3148 3272 0 325 82 49 0 chr5 56856772 56856833 -142773317 + L1MA7 LINE L1 6222 6285 -6 425 286 44 59 chr5 56857298 56857501 -142772649 + L1ME3 LINE L1 5758 5957 -205 363 321 59 50 chr5 56858070 56858291 -142771859 - MIR SINE MIR -34 228 6 624 286 47 9 chr5 56858746 56858959 -142771191 + MLT1I LTR MaLR 1 221 -188 404 191 34 0 chr5 56858978 56859067 -142771083 + MER53 DNA DNA 98 189 0 1664 207 52 3 chr5 56859300 56859648 -142770502 - MLT1A1 LTR MaLR 0 365 1 1420 146 12 8 chr5 56859732 56859978 -142770172 - L1PA16 LINE L1 -9 6157 5911 263 265 129 23 chr5 56861079 56861211 -142768939 - L2 LINE L2 -1 3312 3167 453 270 182 0 chr5 56861911 56862059 -142768091 + MER5A DNA MER1_type 9 183 -6 209 259 0 19 chr5 56862351 56862405 -142767745 + CT-rich Low_complexity Low_complexity 2 54 0 240 143 0 0 chr5 56862406 56862448 -142767702 + (CA)n Simple_repeat Simple_repeat 2 43 0 765 211 0 6 chr5 56863337 56863493 -142766657 + MLT1A1 LTR MaLR 1 155 -210 763 163 0 0 chr5 56863494 56863617 -142766533 + AluJb SINE Alu 178 300 -12 274 313 24 0 chr5 56863665 56863748 -142766402 + L2 LINE L2 2254 2338 -976 932 315 33 10 chr5 56864011 56864401 -142765749 + LTR16C LTR ERVL 89 487 -4 775 246 30 0 chr5 56864701 56864904 -142765246 + MER3 DNA MER1_type 1 209 0 622 343 87 24 chr5 56864908 56865334 -142764816 + L2 LINE L2 2393 2845 -469 307 170 0 0 chr5 56865590 56865643 -142764507 + MER110A LTR ERV1 75 127 -341 216 0 0 0 chr5 56865670 56865694 -142764456 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 353 152 13 25 chr5 56867050 56867129 -142763021 + MER110A LTR ERV1 82 159 -309 429 219 83 89 chr5 56867269 56867540 -142762610 + MER110A LTR ERV1 239 491 0 3776 129 59 27 chr5 56867777 56868527 -142761623 - LTR1 LTR ERV1 -1 784 11 2341 110 3 0 chr5 56868827 56869136 -142761014 + AluSq SINE Alu 1 310 -3 472 335 74 21 chr5 56869571 56869813 -142760337 - MIR SINE MIR -7 255 1 339 279 139 33 chr5 56870074 56870196 -142759954 - L2 LINE L2 -1 3271 3137 2175 226 54 36 chr5 56870232 56871260 -142758890 + L1MD2 LINE L1 4803 5831 -528 292 263 58 82 chr5 56871270 56871441 -142758709 + L2 LINE L2 3095 3261 -52 1844 149 3 29 chr5 56871568 56871884 -142758266 - AluSg SINE Alu -2 308 1 236 284 30 0 chr5 56873184 56873251 -142756899 - L2 LINE L2 0 3272 3204 1708 223 27 38 chr5 56873276 56873755 -142756395 + MLT1D LTR MaLR 16 489 -16 1517 283 91 20 chr5 56874127 56874562 -142755588 + L2 LINE L2 2205 2687 -627 2132 120 20 3 chr5 56874562 56874862 -142755288 - AluSg SINE Alu -5 305 1 1517 283 91 20 chr5 56874862 56874967 -142755183 + L2 LINE L2 2687 2783 -531 2284 193 19 6 chr5 56874967 56875448 -142754702 + L1MB7 LINE L1 5635 6121 -63 282 142 231 112 chr5 56875969 56876103 -142754047 - L2 LINE L2 -5 3308 3159 184 344 103 46 chr5 56876320 56876582 -142753568 - L2 LINE L2 -421 2893 2617 23 0 0 0 chr5 56876646 56876669 -142753481 + AT_rich Low_complexity Low_complexity 1 23 0 3849 261 64 84 chr5 56876770 56878883 -142751267 - L2 LINE L2 -2 3311 1244 4602 145 26 35 chr5 56878887 56879830 -142750320 + MER52C LTR ERV1 1 935 -343 668 126 9 9 chr5 56879830 56879941 -142750209 + MER52C LTR ERV1 1168 1278 0 722 254 214 16 chr5 56879943 56880321 -142749829 - L2 LINE L2 -2080 1234 782 295 261 117 9 chr5 56880319 56880430 -142749720 - MIR SINE MIR -34 228 106 * 204 400 48 0 chr5 56880487 56880592 -142749558 - MIR SINE MIR -63 145 36 2330 167 71 19 chr5 56881445 56881925 -142748225 - MLT1D LTR MaLR 0 505 1 2031 176 8 47 chr5 56882491 56882780 -142747370 - MLT1A1 LTR MaLR 0 365 93 2300 95 7 0 chr5 56882780 56883076 -142747074 - AluSp SINE Alu -14 299 2 2031 176 8 47 chr5 56883076 56883166 -142746984 - MLT1A1 LTR MaLR -272 93 1 423 0 0 0 chr5 56883179 56883226 -142746924 + (TA)n Simple_repeat Simple_repeat 1 47 0 1457 216 122 27 chr5 56883651 56884548 -142745602 - Charlie2 DNA MER1_type -1 2861 1853 1191 251 63 54 chr5 56884615 56885835 -142744315 - L1ME3A LINE L1 0 6170 4906 379 301 75 28 chr5 56885839 56886052 -142744098 - Charlie2 DNA MER1_type -2639 223 1 181 308 0 15 chr5 56886441 56886506 -142743644 - MIR SINE MIR -113 149 86 2822 179 23 0 chr5 56887110 56887668 -142742482 - L1MC3 LINE L1 0 7785 7215 31 26 0 0 chr5 56887737 56887775 -142742375 + AT_rich Low_complexity Low_complexity 1 38 0 2260 99 3 3 chr5 56888401 56888703 -142741447 - AluSp SINE Alu -11 302 1 232 234 143 13 chr5 56888759 56888836 -142741314 - MIR SINE MIR -142 120 34 22 0 0 0 chr5 56889508 56889530 -142740620 + AT_rich Low_complexity Low_complexity 1 22 0 1043 263 152 6 chr5 56890268 56890762 -142739388 + HsTC2 DNA Tc2 1327 1892 -6 2258 160 20 75 chr5 56891120 56891626 -142738524 + MLT2B1 LTR ERVL 1 478 -42 1762 185 89 10 chr5 56891626 56892173 -142737977 - Tigger3(Golem) DNA MER2_type -1 3028 14 311 125 0 0 chr5 56892174 56892222 -142737928 + MLT2B1 LTR ERVL 468 515 0 267 349 12 35 chr5 56892494 56892666 -142737484 - MIR SINE MIR -4 258 91 324 258 129 96 chr5 56892942 56893182 -142736968 + MIR SINE MIR 7 254 -8 288 317 109 0 chr5 56895759 56895860 -142734290 + MIR SINE MIR 34 145 -63 286 298 85 11 chr5 56898616 56898710 -142731440 + MIR3 SINE MIR 77 177 -31 1616 221 36 47 chr5 56898774 56899245 -142730905 - MLT1C LTR MaLR 0 467 2 267 239 28 55 chr5 56899606 56899715 -142730435 + LTR33 LTR ERVL 410 515 -6 294 331 55 31 chr5 56900289 56900452 -142729698 - MIR SINE MIR -78 184 18 22 35 0 0 chr5 56901440 56901469 -142728681 + AT_rich Low_complexity Low_complexity 1 29 0 226 295 49 0 chr5 56903714 56903775 -142726375 + MER81 DNA DNA 7 70 -44 1323 210 93 29 chr5 56903894 56904237 -142725913 - MLT1A1 LTR MaLR 0 365 1 3564 250 63 57 chr5 56904470 56907467 -142722683 - L1MEc LINE L1 -3207 3008 36 1196 349 60 37 chr5 56907519 56908327 -142721823 + L2 LINE L2 2255 3085 -228 2099 114 0 35 chr5 56908327 56908644 -142721506 - AluSc SINE Alu -3 306 1 1196 349 60 37 chr5 56908644 56908837 -142721313 + L2 LINE L2 3085 3272 -41 199 220 120 0 chr5 56909108 56909158 -142720992 + L2 LINE L2 3257 3312 -1 446 303 42 7 chr5 56909833 56909975 -142720175 - MIR SINE MIR -67 195 49 2046 130 19 3 chr5 56910014 56910321 -142719829 + AluSq SINE Alu 1 312 -1 287 302 120 52 chr5 56910780 56911071 -142719079 - L2 LINE L2 -1 3312 3002 197 385 0 44 chr5 56911073 56911164 -142718986 - MIR SINE MIR -75 133 47 5559 129 40 5 chr5 56911189 56912338 -142717812 - L1PA16 LINE L1 -5 6161 4994 334 279 65 13 chr5 56913151 56913305 -142716845 - L1M4 LINE L1 -1453 4693 4532 518 247 38 44 chr5 56913804 56913962 -142716188 + MIR SINE MIR 105 261 -1 2589 48 0 3 chr5 56914289 56914598 -142715552 + AluY SINE Alu 1 308 -3 361 293 17 63 chr5 56914630 56914930 -142715220 - L1MDa LINE L1 -4480 2060 1775 350 295 166 0 chr5 56915339 56915478 -142714672 + MIR SINE MIR 11 172 -90 193 368 11 21 chr5 56915630 56915725 -142714425 - L2 LINE L2 -290 2982 2889 785 262 49 9 chr5 56915848 56916073 -142714077 + LTR16C LTR ERVL 169 402 -89 361 322 81 13 chr5 56916641 56916790 -142713360 - MIR3 SINE MIR -29 179 21 25 0 0 0 chr5 56917067 56917092 -142713058 + AT_rich Low_complexity Low_complexity 1 25 0 5322 170 34 8 chr5 56917109 56919034 -142711116 - L1PA16 LINE L1 -4 6162 4192 240 182 40 81 chr5 56919110 56919209 -142710941 + L1 LINE L1 3178 3272 -2874 * 2528 275 1 4 chr5 56919206 56919970 -142710180 - L1M4 LINE L1 -2960 3186 2425 221 308 24 53 chr5 56920014 56920183 -142709967 + L2 LINE L2 2004 2167 -1147 368 368 81 58 chr5 56920872 56921304 -142708846 + L2 LINE L2 2826 3267 -5 314 349 78 103 chr5 56921551 56922270 -142707880 + L2 LINE L2 2573 3272 0 246 338 56 0 chr5 56923575 56923646 -142706504 + MIR SINE MIR 66 140 -68 22 0 0 0 chr5 56924064 56924086 -142706064 + AT_rich Low_complexity Low_complexity 1 22 0 440 305 23 28 chr5 56924251 56924428 -142705722 + MER91A DNA MER1_type 1 176 -20 936 174 14 47 chr5 56924696 56924908 -142705242 - MER3 DNA MER1_type -4 205 1 861 306 125 18 chr5 56925233 56925736 -142704414 - L1MC4a LINE L1 -1911 5897 5341 21 0 0 0 chr5 56927291 56927312 -142702838 + AT_rich Low_complexity Low_complexity 1 21 0 2310 241 100 45 chr5 56927386 56927716 -142702434 + Zaphod DNA AcHobo 10 320 -3711 7154 35 6 2 chr5 56927716 56928586 -142701564 + L1PA4 LINE L1 5283 6155 0 2310 241 100 45 chr5 56928586 56929204 -142700946 + Zaphod DNA AcHobo 320 1010 -3021 1348 245 39 15 chr5 56929178 56929590 -142700560 + Zaphod DNA AcHobo 3595 4016 -15 * 34 65 0 0 chr5 56930553 56930615 -142699535 + AT_rich Low_complexity Low_complexity 1 62 0 378 61 0 0 chr5 56931151 56931200 -142698950 + (TG)n Simple_repeat Simple_repeat 2 50 0 350 317 7 55 chr5 56932309 56932454 -142697696 - L2 LINE L2 -4 3309 3172 2369 98 0 0 chr5 56932887 56933192 -142696958 + AluSc SINE Alu 1 305 -4 267 228 0 0 chr5 56934166 56934223 -142695927 + L2 LINE L2 3257 3313 0 250 364 25 8 chr5 56984682 56984800 -142645350 - L2 LINE L2 -221 3051 2932 200 336 46 106 chr5 56984811 56985094 -142645056 + L2 LINE L2 3003 3268 -4 303 225 125 0 chr5 56985564 56985644 -142644506 - L1MC4 LINE L1 -1340 6702 6613 24 32 0 0 chr5 56985645 56985676 -142644474 + AT_rich Low_complexity Low_complexity 1 31 0 32 43 0 0 chr5 56985855 56985901 -142644249 + AT_rich Low_complexity Low_complexity 1 46 0 387 361 36 12 chr5 56987404 56987570 -142642580 - L3b LINE CR1 -88 1495 1326 289 305 0 19 chr5 56988019 56988083 -142642067 + (TG)n Simple_repeat Simple_repeat 2 65 -39 1746 179 48 20 chr5 56988083 56988435 -142641715 - MLT1A1 LTR MaLR 0 365 4 289 305 0 19 chr5 56988435 56988475 -142641675 + (TG)n Simple_repeat Simple_repeat 65 104 0 203 299 0 7 chr5 56988507 56988661 -142641489 + (TATG)n Simple_repeat Simple_repeat 4 156 0 1910 132 0 11 chr5 56989333 56989636 -142640514 + AluSx SINE Alu 5 304 0 218 339 31 0 chr5 56989681 56989746 -142640404 - L2 LINE L2 -87 3185 3119 1529 158 3 42 chr5 56990341 56990625 -142639525 + AluJb SINE Alu 40 312 0 669 266 202 38 chr5 56991783 56992009 -142638141 - L2 LINE L2 -7 3306 3119 333 0 0 0 chr5 56992009 56992046 -142638104 + (TG)n Simple_repeat Simple_repeat 1 37 0 669 266 202 38 chr5 56992046 56992322 -142637828 - L2 LINE L2 -194 3119 2718 266 247 185 0 chr5 56992792 56992873 -142637277 + MIR SINE MIR 97 192 -70 205 278 0 22 chr5 56992920 56993010 -142637140 + T-rich Low_complexity Low_complexity 6 93 0 1886 92 3 68 chr5 56993758 56994052 -142636098 - AluSc SINE Alu -30 279 5 377 300 126 16 chr5 56996781 56996971 -142633179 - MIR SINE MIR -11 251 41 1311 303 15 2 chr5 56998396 56998805 -142631345 - LTR16A LTR ERVL -12 438 25 2020 110 7 7 chr5 56999298 56999579 -142630571 + AluSx SINE Alu 1 281 -31 198 0 0 0 chr5 56999584 56999606 -142630544 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 303 289 299 15 chr5 56999607 56999811 -142630339 - MIR SINE MIR 0 262 1 573 317 216 8 chr5 57000042 57000421 -142629729 - L2 LINE L2 -2 3311 2854 232 220 0 0 chr5 57001634 57001693 -142628457 - L1ME4a LINE L1 -2 6119 6061 629 228 41 0 chr5 57001719 57001900 -142628250 + FLAM_A SINE Alu 5 190 0 27 0 0 0 chr5 57002043 57002070 -142628080 + AT_rich Low_complexity Low_complexity 1 27 0 802 152 0 0 chr5 57003780 57003918 -142626232 + AluSp/q SINE Alu 176 313 0 2229 142 3 12 chr5 57004644 57004983 -142625167 - MER1B DNA MER1_type 0 337 2 1429 199 7 14 chr5 57005060 57005346 -142624804 - AluJo SINE Alu -22 290 7 331 291 60 8 chr5 57005390 57005507 -142624643 - MIR SINE MIR -77 185 63 231 61 0 0 chr5 57005881 57005914 -142624236 + (CTAAA)n Simple_repeat Simple_repeat 3 35 0 767 126 57 63 chr5 57006128 57006287 -142623863 + MLT1A2 LTR MaLR 1 158 -216 684 61 20 0 chr5 57006296 57006394 -142623756 + AluY SINE Alu 1 100 -211 697 290 10 19 chr5 57006604 57006946 -142623204 + AluY SINE Alu 1 339 0 330 45 0 0 chr5 57006960 57007004 -142623146 + (TC)n Simple_repeat Simple_repeat 2 45 0 921 210 5 5 chr5 57007004 57007190 -142622960 + MLT1A2 LTR MaLR 189 374 0 198 337 22 0 chr5 57008102 57008194 -142621956 - MIR SINE MIR 0 262 169 2293 96 7 0 chr5 57008258 57008559 -142621591 + AluSx SINE Alu 1 303 -9 384 253 21 0 chr5 57010951 57011046 -142619104 - MLT1K LTR MaLR 0 588 492 374 309 32 8 chr5 57011142 57011265 -142618885 + MIR SINE MIR 23 148 -114 1939 115 20 7 chr5 57011966 57012261 -142617889 + L1PA14 LINE L1 5845 6143 -18 278 232 14 0 chr5 57012842 57012911 -142617239 - MLT1G LTR MaLR 0 590 521 2329 80 0 10 chr5 57012911 57013212 -142616938 + AluSc SINE Alu 1 298 -11 479 16 0 0 chr5 57013259 57013320 -142616830 - L1PA6 LINE L1 0 6154 6094 386 223 181 0 chr5 57013489 57013583 -142616567 - MLT1H1 LTR MaLR -444 111 1 581 308 94 4 chr5 57015177 57015411 -142614739 + MIR SINE MIR 4 258 -4 1592 81 77 0 chr5 57016132 57016341 -142613809 - AluY SINE Alu -86 225 1 1750 165 0 47 chr5 57017505 57017826 -142612324 + AluSx SINE Alu 1 306 -6 21 71 0 0 chr5 57018970 57019012 -142611138 + AT_rich Low_complexity Low_complexity 1 42 0 265 233 41 0 chr5 57019676 57019749 -142610401 + HsTC2 DNA Tc2 1801 1876 -22 339 225 51 36 chr5 57019991 57020121 -142610029 - L1ME LINE L1 -458 5663 5534 229 236 0 55 chr5 57020219 57020274 -142609876 - MLT1D LTR MaLR -451 54 3 682 186 42 0 chr5 57020816 57020934 -142609216 - FLAM_C SINE Alu -20 123 1 269 0 56 0 chr5 57021039 57021075 -142609075 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 490 341 95 34 chr5 57021958 57022401 -142607749 - MLT1K LTR MaLR -2 586 117 1838 184 33 17 chr5 57022854 57023213 -142606937 - MLT1A1 LTR MaLR 0 365 1 322 407 22 6 chr5 57024995 57025177 -142604973 + MIR3 SINE MIR 3 187 -21 1687 181 25 42 chr5 57025388 57025747 -142604403 - MLT1A1 LTR MaLR -12 353 1 214 267 133 13 chr5 57025753 57025828 -142604322 - MIR SINE MIR -120 142 59 437 135 14 14 chr5 57026126 57026200 -142603950 - MER47B DNA MER2_type 0 418 345 2098 144 56 0 chr5 57026538 57026857 -142603293 - MER47B DNA MER2_type -81 337 1 208 93 47 47 chr5 57026896 57026931 -142603219 + (TATG)n Simple_repeat Simple_repeat 1 38 -5 2257 126 128 8 chr5 57026931 57027313 -142602837 + MSTA LTR MaLR 1 428 0 208 93 47 47 chr5 57027313 57027320 -142602830 + (TATG)n Simple_repeat Simple_repeat 37 43 0 238 156 0 0 chr5 57027320 57027365 -142602785 - L1MC4 LINE L1 -1340 6702 6658 23 33 0 0 chr5 57027618 57027648 -142602502 + AT_rich Low_complexity Low_complexity 1 30 0 625 36 0 12 chr5 57027871 57027954 -142602196 + L1PA2 LINE L1 6067 6148 -7 512 273 51 57 chr5 57028445 57028797 -142601353 + MER31-int LTR ERV1 3399 3748 -1188 2387 186 39 11 chr5 57028828 57029295 -142600855 + MER66B LTR ERV1 7 486 0 813 221 44 148 chr5 57029885 57030307 -142599843 + LTR37B LTR ERV1 3 363 -105 2368 81 0 13 chr5 57030307 57030615 -142599535 - AluY SINE Alu -7 304 1 813 221 44 148 chr5 57030615 57030712 -142599438 + LTR37B LTR ERV1 363 468 0 8070 127 20 24 chr5 57033991 57035249 -142594901 - HSMAR2 DNA Mariner -2 1300 46 3586 66 4 2 chr5 57035249 57035719 -142594431 - L1PA8 LINE L1 -6 6166 5696 8070 127 20 24 chr5 57035719 57035762 -142594388 - HSMAR2 DNA Mariner -1256 46 4 355 288 125 5 chr5 57036581 57036765 -142593385 - MIR SINE MIR 0 262 57 1220 283 82 3 chr5 57037434 57037823 -142592327 + LTR16C LTR ERVL 72 491 0 476 274 9 9 chr5 57038183 57038289 -142591861 + MER119 DNA MER1_type 9 114 -469 847 242 37 0 chr5 57038298 57038513 -142591637 + MER119 DNA MER1_type 361 583 0 311 172 62 0 chr5 57038770 57038834 -142591316 - MLT1D LTR MaLR 0 505 438 23122 92 4 13 chr5 57038834 57042233 -142587917 + L1P LINE L1 1947 5313 -833 6709 63 6 12 chr5 57042233 57043358 -142586792 + L1PA7 LINE L1 5144 6154 0 1556 238 57 7 chr5 57043361 57043785 -142586365 - MLT1D LTR MaLR -59 446 2 520 224 10 0 chr5 57044336 57044434 -142585716 - Tigger7 DNA MER2_type 0 2587 2489 * 1306 201 51 4 chr5 57044432 57044686 -142585464 - Tigger7 DNA MER2_type -466 267 2 380 126 63 7 chr5 57046376 57046519 -142583631 + (TA)n Simple_repeat Simple_repeat 1 151 0 2285 224 91 98 chr5 57046541 57047832 -142582318 - L1MC5 LINE L1 -44 7917 6636 24 0 0 0 chr5 57047985 57048009 -142582141 + AT_rich Low_complexity Low_complexity 1 24 0 314 305 69 52 chr5 57048166 57048340 -142581810 - L1MC4a LINE L1 -1579 6229 6053 351 264 26 39 chr5 57048411 57048424 -142581726 - L1MC4a LINE L1 -1893 5915 5903 2022 124 75 23 chr5 57048424 57048770 -142581380 + THE1B LTR MaLR 1 364 0 351 264 26 39 chr5 57048770 57048911 -142581239 - L1MC4a LINE L1 -1905 5903 5763 2067 123 16 7 chr5 57048986 57049294 -142580856 + AluSx SINE Alu 1 311 -1 651 224 112 21 chr5 57049303 57049589 -142580561 + MLT1C LTR MaLR 49 388 -117 1156 260 97 17 chr5 57049703 57050169 -142579981 - L1MC4a LINE L1 -2051 5757 5255 232 325 32 45 chr5 57051291 57051445 -142578705 + L2 LINE L2 3084 3235 -78 35 83 0 0 chr5 57051462 57051546 -142578604 + AT_rich Low_complexity Low_complexity 1 84 0 2799 207 10 47 chr5 57051558 57052235 -142577915 - MER82 DNA MER2_type -1 652 1 24 0 0 0 chr5 57054472 57054496 -142575654 + AT_rich Low_complexity Low_complexity 1 24 0 204 273 36 0 chr5 57054695 57054750 -142575400 + MIR SINE MIR 54 110 -98 302 294 73 0 chr5 57055677 57055786 -142574364 + L2 LINE L2 3155 3271 -1 339 229 34 25 chr5 57056015 57056133 -142574017 - Charlie7 DNA MER1_type -2242 370 252 815 319 159 27 chr5 57056530 57057201 -142572949 + L2 LINE L2 609 1368 -1946 636 235 7 0 chr5 57057233 57057369 -142572781 - MER45 DNA AcHobo -903 137 1 351 211 35 35 chr5 57057418 57057532 -142572618 + Charlie7 DNA MER1_type 252 365 -2247 201 304 0 0 chr5 57058072 57058118 -142572032 - L3 LINE CR1 -115 1462 1417 2487 80 9 0 chr5 57059728 57060077 -142570073 - L1P4 LINE L1 -438 5730 5379 3657 139 6 8 chr5 57060078 57060738 -142569412 + L1P4 LINE L1 4697 5355 -791 218 191 0 0 chr5 57061473 57061515 -142568635 + (CA)n Simple_repeat Simple_repeat 1 42 0 24 32 0 0 chr5 57062165 57062196 -142567954 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 57062451 57062473 -142567677 + AT_rich Low_complexity Low_complexity 1 22 0 221 298 149 0 chr5 57063534 57063648 -142566502 + MIR SINE MIR 52 182 -80 499 246 31 50 chr5 57066962 57067222 -142562928 - L1MC5 LINE L1 -49 7912 7658 1572 199 48 27 chr5 57067802 57068174 -142561976 - MLT1B LTR MaLR -10 380 1 22 35 0 0 chr5 57070091 57070120 -142560030 + AT_rich Low_complexity Low_complexity 1 29 0 389 381 37 4 chr5 57070817 57071061 -142559089 - LTR16A LTR ERVL -177 273 22 513 326 88 16 chr5 57071368 57071742 -142558408 - ERVL LTR ERVL -572 5192 4792 290 353 8 8 chr5 57071943 57072065 -142558085 - ERVL LTR ERVL -1176 4588 4467 1056 323 66 15 chr5 57072075 57072620 -142557530 - ERVL LTR ERVL -1290 4364 3792 901 333 40 16 chr5 57072993 57073419 -142556731 - LTR16C LTR ERVL -55 436 1 1529 197 83 9 chr5 57075115 57075465 -142554685 - MLT1D LTR MaLR -22 483 108 279 133 0 0 chr5 57075468 57075513 -142554637 + L1P LINE L1 1 45 -6101 19434 45 1 8 chr5 57075513 57078742 -142551408 + L1PA5 LINE L1 2925 6152 -2 25 0 0 0 chr5 57078745 57078770 -142551380 + AT_rich Low_complexity Low_complexity 1 25 0 308 316 0 0 chr5 57078770 57078868 -142551282 - MLT1D LTR MaLR -387 118 21 1248 40 0 0 chr5 57079533 57079681 -142550469 - L1PA3 LINE L1 -3 6152 6005 1774 27 0 0 chr5 57079681 57079900 -142550250 + L1PA3 LINE L1 5754 5972 -183 303 334 76 26 chr5 57080131 57080450 -142549700 + L2 LINE L2 2694 3038 -234 345 314 92 41 chr5 57080529 57080800 -142549350 + L2 LINE L2 3005 3289 -24 269 268 92 56 chr5 57080933 57081075 -142549075 - L2 LINE L2 0 3313 3167 720 246 59 114 chr5 57081624 57082218 -142547932 + MLT1G LTR MaLR 27 587 -3 418 227 8 8 chr5 57082400 57082528 -142547622 + GA-rich Low_complexity Low_complexity 2 129 0 215 221 132 0 chr5 57083066 57083134 -142547016 + MIR SINE MIR 64 140 -122 322 299 60 27 chr5 57084759 57084943 -142545207 + MER102b DNA MER1_type 149 338 -3 189 74 0 0 chr5 57085287 57085314 -142544836 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 1114 311 97 12 chr5 57085555 57086297 -142543853 - L2 LINE L2 -5 3308 2499 2220 48 41 31 chr5 57086358 57086649 -142543501 + AluY SINE Alu 1 294 -17 2384 196 42 10 chr5 57086650 57087146 -142543004 - MER68 LTR ERV1 -45 517 6 2058 160 97 8 chr5 57087267 57087660 -142542490 - MSTA LTR MaLR 0 428 1 310 300 40 50 chr5 57087678 57087778 -142542372 - L2 LINE L2 -56 3216 3118 312 250 29 0 chr5 57088050 57088118 -142542032 - L2 LINE L2 -1 3312 3243 21 0 0 0 chr5 57088362 57088383 -142541767 + AT_rich Low_complexity Low_complexity 1 21 0 1948 236 43 21 chr5 57088836 57089366 -142540784 - MLT1F LTR MaLR 0 542 1 276 35 0 70 chr5 57089961 57090018 -142540132 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 214 338 0 14 chr5 57090899 57090973 -142539177 - MIR SINE MIR -6 256 184 539 252 168 7 chr5 57091997 57092152 -142537998 - MER5A DNA MER1_type -6 183 4 1635 194 185 27 chr5 57092327 57092775 -142537375 - MLT2B1 LTR ERVL -1 519 1 386 315 66 6 chr5 57092811 57092992 -142537158 + MIR SINE MIR 66 257 -5 39621 63 6 2 chr5 57093105 57099234 -142530916 - L1PA5 LINE L1 0 6154 1 1998 146 46 30 chr5 57099446 57099815 -142530335 - THE1C LTR MaLR 0 375 1 277 270 0 14 chr5 57100800 57100874 -142529276 + MIR SINE MIR 81 153 -109 390 339 69 32 chr5 57100891 57101080 -142529070 - MER91A DNA MER1_type 0 196 1 222 316 109 40 chr5 57101300 57101474 -142528676 + MER5A DNA MER1_type 3 188 -1 201 39 0 0 chr5 57101529 57101555 -142528595 + (TC)n Simple_repeat Simple_repeat 2 27 0 1232 244 43 10 chr5 57102639 57102942 -142527208 + MLT1A1 LTR MaLR 53 365 0 1684 193 58 46 chr5 57104594 57104970 -142525180 + MER63B DNA MER1_type 1 384 -678 1442 186 39 69 chr5 57104970 57105276 -142524874 + AluJb SINE Alu 3 299 -13 1684 193 58 46 chr5 57105276 57105330 -142524820 + MER63B DNA MER1_type 384 436 0 478 292 70 22 chr5 57105476 57105661 -142524489 - MIR SINE MIR -12 250 57 357 299 32 33 chr5 57105701 57105878 -142524272 - MIR SINE MIR -67 141 11 329 372 68 5 chr5 57106295 57106502 -142523648 - MLT1K LTR MaLR -222 366 147 26 50 0 0 chr5 57107291 57107331 -142522819 + AT_rich Low_complexity Low_complexity 1 40 0 1887 201 2 50 chr5 57107552 57107969 -142522181 - MLT2D LTR ERVL -14 400 4 1454 191 56 28 chr5 57108185 57108371 -142521779 - MLT1A1 LTR MaLR 0 365 186 306 0 0 0 chr5 57108371 57108405 -142521745 + (GA)n Simple_repeat Simple_repeat 2 35 0 1454 191 56 28 chr5 57108405 57108573 -142521577 - MLT1A1 LTR MaLR -179 186 1 827 218 22 0 chr5 57108573 57108752 -142521398 - MLT1A1-int LTR MaLR 0 1735 1553 254 330 32 55 chr5 57109072 57109292 -142520858 + ERVL LTR ERVL 957 1170 -4484 1846 168 13 58 chr5 57109292 57109674 -142520476 - MLT1A1 LTR MaLR 0 365 1 254 330 32 55 chr5 57109674 57109762 -142520388 + ERVL LTR ERVL 1170 1258 -4396 857 323 15 43 chr5 57110145 57110541 -142519609 + ERVL LTR ERVL 1666 2050 -3604 284 361 38 0 chr5 57110883 57111016 -142519134 + ERVL LTR ERVL 5122 5259 -505 357 239 0 0 chr5 57111379 57111446 -142518704 - MER2 DNA MER2_type 0 345 279 43002 47 4 7 chr5 57111463 57117627 -142512523 + L1PA4 LINE L1 4 6152 -3 5537 218 19 4 chr5 57117751 57118896 -142511254 - L1M2 LINE L1 -4730 2119 958 528 139 57 25 chr5 57118887 57119009 -142511141 + L1PB4 LINE L1 1974 2099 -4750 * 4532 194 24 2 chr5 57119016 57120673 -142509477 + L1PB4 LINE L1 5168 6856 -2 1155 183 14 0 chr5 57120707 57120915 -142509235 - MER2 DNA MER2_type -134 211 1 258 222 0 0 chr5 57121067 57121121 -142509029 + MLT1J LTR MaLR 99 152 -359 2420 67 7 3 chr5 57121134 57121433 -142508717 + AluY SINE Alu 1 300 -11 2524 88 64 5 chr5 57121434 57121811 -142508339 - L1PA11 LINE L1 -2 6172 5774 2254 100 3 10 chr5 57122597 57122898 -142507252 + AluSx SINE Alu 1 299 -13 3956 132 28 10 chr5 57122898 57123563 -142506587 + L1PA14 LINE L1 5482 6161 0 2995 129 15 28 chr5 57123563 57123731 -142506419 + L1MA5A LINE L1 5769 5938 -359 1772 187 0 3 chr5 57123731 57124031 -142506119 + AluJo SINE Alu 3 301 -11 2995 129 15 28 chr5 57124031 57124385 -142505765 + L1MA5A LINE L1 5938 6289 -8 227 320 111 43 chr5 57124420 57124654 -142505496 - MIR SINE MIR 0 262 13 216 331 140 57 chr5 57124690 57124847 -142505303 + L2 LINE L2 3099 3268 -4 1461 216 63 11 chr5 57125744 57126091 -142504059 - MLT1A1 LTR MaLR 0 365 1 436 330 51 25 chr5 57127025 57127151 -142502999 + MIR SINE MIR 21 157 -105 2019 115 7 14 chr5 57127151 57127446 -142502704 - AluSq SINE Alu -20 293 1 436 330 51 25 chr5 57127446 57127555 -142502595 + MIR SINE MIR 157 262 0 23 54 0 0 chr5 57128442 57128479 -142501671 + AT_rich Low_complexity Low_complexity 1 37 0 437 135 14 14 chr5 57128621 57128695 -142501455 - MER47B DNA MER2_type 0 418 345 2048 151 56 0 chr5 57129033 57129352 -142500798 - MER47B DNA MER2_type -81 337 1 261 212 0 61 chr5 57129392 57129426 -142500724 + (TG)n Simple_repeat Simple_repeat 1 35 -27 1804 175 128 8 chr5 57129426 57129808 -142500342 + MSTA LTR MaLR 1 428 0 261 212 0 61 chr5 57129808 57129830 -142500320 + (TG)n Simple_repeat Simple_repeat 35 55 -7 207 0 0 0 chr5 57129830 57129853 -142500297 + (CA)n Simple_repeat Simple_repeat 2 24 0 261 212 0 61 chr5 57129853 57129861 -142500289 + (TG)n Simple_repeat Simple_repeat 55 62 0 2230 101 7 0 chr5 57130326 57130622 -142499528 - AluSx SINE Alu -14 298 1 336 304 70 35 chr5 57131248 57131419 -142498731 - MER5A DNA MER1_type -12 177 1 218 31 0 31 chr5 57131883 57131915 -142498235 + (TA)n Simple_repeat Simple_repeat 1 31 0 288 312 107 28 chr5 57133052 57133267 -142496883 - L2 LINE L2 0 3313 3082 1153 77 0 0 chr5 57133884 57134027 -142496123 - AluY SINE Alu -15 296 154 2163 107 0 0 chr5 57134530 57134831 -142495319 - AluY SINE Alu 0 304 4 223 362 21 0 chr5 57135092 57135186 -142494964 + L2 LINE L2 3177 3272 0 22 70 0 0 chr5 57135938 57135981 -142494169 + AT_rich Low_complexity Low_complexity 1 43 0 345 344 48 21 chr5 57136079 57136410 -142493740 + L1MEc LINE L1 203 542 -6021 1180 222 51 11 chr5 57136494 57136769 -142493381 + MLT2C1 LTR ERVL 112 397 0 416 274 150 36 chr5 57137245 57138074 -142492076 + L1MEc LINE L1 912 1885 -4497 301 157 0 0 chr5 57138088 57138139 -142492011 + L1MEc LINE L1 2369 2419 -4144 1958 248 60 7 chr5 57138245 57138934 -142491216 + L1MEc LINE L1 2534 3258 -3124 295 156 104 0 chr5 57139006 57139102 -142491048 - L1M4 LINE L1 -1712 4434 4329 195 239 22 0 chr5 57141361 57141407 -142488743 + L2 LINE L2 3180 3226 -87 495 264 54 54 chr5 57141480 57141628 -142488522 + MER5A DNA MER1_type 29 187 -2 195 327 0 0 chr5 57141975 57142030 -142488120 + L2 LINE L2 3214 3268 -4 25 0 0 0 chr5 57142267 57142292 -142487858 + AT_rich Low_complexity Low_complexity 1 25 0 730 268 143 40 chr5 57142303 57142631 -142487519 - MLT1A1 LTR MaLR -1 364 3 279 0 0 0 chr5 57142639 57142670 -142487480 + (CA)n Simple_repeat Simple_repeat 1 31 0 784 305 63 6 chr5 57143000 57143389 -142486761 + L1M4 LINE L1 4595 5004 -1142 1259 178 9 63 chr5 57143416 57143747 -142486403 + MER33 DNA MER1_type 12 324 0 656 216 74 69 chr5 57143750 57144165 -142485985 + L1M1 LINE L1 5039 5441 -743 310 253 42 11 chr5 57144150 57144245 -142485905 + L1ME LINE L1 4816 4913 -1233 * 1664 226 20 55 chr5 57144277 57144767 -142485383 + MLT1D LTR MaLR 1 473 -32 6084 189 106 37 chr5 57144767 57145584 -142484566 + L1MC3 LINE L1 6041 6800 -985 210 37 0 0 chr5 57145584 57145611 -142484539 + (CA)n Simple_repeat Simple_repeat 2 28 0 6084 189 106 37 chr5 57145611 57146395 -142483755 + L1MC3 LINE L1 6800 7753 -32 274 195 140 0 chr5 57146400 57146479 -142483671 + L1ME LINE L1 5408 5494 -672 256 306 12 0 chr5 57147346 57147431 -142482719 + L2 LINE L2 2423 2508 -806 2081 302 129 14 chr5 57147612 57148560 -142481590 - L2 LINE L2 -383 2931 1875 506 268 14 21 chr5 57148692 57148834 -142481316 + MIR3 SINE MIR 20 160 -48 194 288 126 36 chr5 57149569 57149680 -142480470 - MIR SINE MIR -17 245 125 228 245 0 0 chr5 57150560 57150609 -142479541 + MIR SINE MIR 105 153 -109 656 340 45 0 chr5 57150760 57151007 -142479143 + MIR SINE MIR 3 260 -2 182 408 0 0 chr5 57151230 57151306 -142478844 - L2 LINE L2 -237 3076 3001 25 0 0 0 chr5 57152170 57152195 -142477955 + AT_rich Low_complexity Low_complexity 1 25 0 2408 198 35 6 chr5 57153515 57154005 -142476145 + MER34 LTR ERV1 36 539 -3 522 265 111 65 chr5 57154072 57154551 -142475599 - MER34B LTR ERV1 -64 501 1 2147 255 67 23 chr5 57157125 57157771 -142472379 + L1MDa LINE L1 14 687 -5853 7362 18 6 0 chr5 57157788 57158685 -142471465 - L1PA3 LINE L1 0 6155 5254 12703 34 1 0 chr5 57158690 57160304 -142469846 - L1P LINE L1 -798 5348 3734 2357 100 0 0 chr5 57160352 57160662 -142469488 + AluSp SINE Alu 1 310 -3 1283 176 92 3 chr5 57160679 57161014 -142469136 + L1MDa LINE L1 1003 1367 -5173 2449 111 3 8 chr5 57161146 57161515 -142468635 + THE1C LTR MaLR 6 372 -3 23 0 0 0 chr5 57161522 57161545 -142468605 + AT_rich Low_complexity Low_complexity 1 23 0 325 314 107 29 chr5 57161798 57161938 -142468212 - MER91A DNA MER1_type -40 156 6 194 300 129 57 chr5 57162123 57162176 -142467974 - MIR SINE MIR -6 256 208 962 173 11 6 chr5 57162176 57162355 -142467795 - L1MC1 LINE L1 -16 6317 6138 194 300 129 57 chr5 57162355 57162511 -142467639 - MIR SINE MIR -54 208 32 23 68 0 0 chr5 57163165 57163209 -142466941 + AT_rich Low_complexity Low_complexity 1 44 0 4952 216 35 14 chr5 57163796 57165119 -142465031 - L1 LINE L1 -1038 5108 3759 869 184 57 9 chr5 57165128 57165356 -142464794 - MER33 DNA MER1_type -85 239 1 1835 180 22 3 chr5 57165388 57165750 -142464400 + L1MB7 LINE L1 5527 5895 -289 472 68 0 0 chr5 57165751 57165810 -142464340 + AluS SINE Alu 40 98 -214 266 230 14 0 chr5 57165915 57165989 -142464161 - L1M4 LINE L1 -1233 4913 4839 514 214 67 77 chr5 57165990 57166410 -142463740 - L1M1 LINE L1 -743 5403 5039 1021 193 9 66 chr5 57166413 57166745 -142463405 - MER33 DNA MER1_type 0 324 12 365 321 19 0 chr5 57166776 57166935 -142463215 - L1M4 LINE L1 -1146 5000 4839 1602 247 138 65 chr5 57168303 57169029 -142461121 + L2 LINE L2 1889 2667 -647 616 212 169 0 chr5 57169054 57169290 -142460860 - L1MB7 LINE L1 -19 6165 5890 606 181 0 9 chr5 57169293 57169409 -142460741 - AluSp/q SINE Alu -8 305 191 305 330 39 62 chr5 57171425 57171683 -142458467 - MIR SINE MIR -8 254 3 311 351 63 0 chr5 57171791 57171902 -142458248 - L2 LINE L2 0 3313 3196 1212 80 0 0 chr5 57173789 57173940 -142456210 - AluSg/x SINE Alu -4 306 156 24 0 0 0 chr5 57175177 57175201 -142454949 + AT_rich Low_complexity Low_complexity 1 24 0 307 299 15 0 chr5 57175748 57175815 -142454335 + MER5A DNA MER1_type 57 124 -65 2550 43 0 3 chr5 57176149 57176451 -142453699 + AluY SINE Alu 1 301 -10 358 155 0 0 chr5 57176504 57176562 -142453588 - MIR SINE MIR -112 150 93 26 64 0 0 chr5 57177234 57177281 -142452869 + AT_rich Low_complexity Low_complexity 1 47 0 321 276 71 39 chr5 57177507 57177634 -142452516 - L2 LINE L2 -5 3267 3137 507 80 13 0 chr5 57178329 57178404 -142451746 - L1P4 LINE L1 -592 5582 5507 31 44 0 0 chr5 57178467 57178512 -142451638 + AT_rich Low_complexity Low_complexity 1 45 0 482 308 123 40 chr5 57178696 57179343 -142450807 - L2 LINE L2 -8 3305 2493 936 258 177 75 chr5 57180247 57180836 -142449314 - L2 LINE L2 -1101 2213 1565 2197 117 0 0 chr5 57182229 57182527 -142447623 + AluSg SINE Alu 5 302 -8 351 0 0 0 chr5 57182620 57182659 -142447491 + (CA)n Simple_repeat Simple_repeat 1 39 0 341 284 27 108 chr5 57183394 57183616 -142446534 - L2 LINE L2 -662 2652 2449 805 226 24 6 chr5 57184650 57184818 -142445332 - MER5B DNA MER1_type -7 171 1 418 236 129 14 chr5 57185114 57185254 -142444896 - MIR SINE MIR -56 206 51 393 324 7 14 chr5 57185902 57186044 -142444106 + MER5A DNA MER1_type 4 144 -45 274 360 8 16 chr5 57185933 57186058 -142444092 - MER5A DNA MER1_type -23 166 43 * 26 0 0 0 chr5 57186665 57186691 -142443459 + AT_rich Low_complexity Low_complexity 1 26 0 293 328 34 54 chr5 57186797 57187001 -142443149 + L3b LINE CR1 1203 1402 -181 858 228 0 11 chr5 57187375 57187555 -142442595 - FRAM SINE Alu -1 175 1 4458 161 55 19 chr5 57188487 57189866 -142440284 - pTR5 LTR ERV1 0 2606 1524 234 0 0 0 chr5 57190173 57190199 -142439951 + (TG)n Simple_repeat Simple_repeat 2 27 0 537 204 0 0 chr5 57190389 57190492 -142439658 + U13 snRNA snRNA 1 103 -1 22 0 0 0 chr5 57193174 57193196 -142436954 + AT_rich Low_complexity Low_complexity 1 22 0 34 0 0 0 chr5 57194928 57194962 -142435188 + AT_rich Low_complexity Low_complexity 1 34 0 234 293 165 0 chr5 57295733 57295866 -142334284 - MIR SINE MIR -43 219 65 2025 134 16 49 chr5 57295977 57296365 -142333785 - THE1C LTR MaLR 0 375 1 623 129 0 79 chr5 57296502 57296642 -142333508 + FLAM_C SINE Alu 5 133 -10 180 0 0 0 chr5 57297118 57297138 -142333012 + (TTCTG)n Simple_repeat Simple_repeat 1 20 0 7976 170 19 42 chr5 57297635 57299356 -142330794 - L1P LINE L1 -4462 1684 4 311 285 32 65 chr5 57299894 57300017 -142330133 + L2 LINE L2 3152 3270 -2 1935 163 6 10 chr5 57300038 57300351 -142329799 + AluSx SINE Alu 1 312 0 395 307 9 0 chr5 57300798 57300912 -142329238 - L2 LINE L2 -1 3312 3198 622 280 186 20 chr5 57301550 57302204 -142327946 + L2 LINE L2 2538 3308 -5 1303 171 16 45 chr5 57303576 57303886 -142326264 - MER50 LTR ERV1 -1 733 433 961 110 27 50 chr5 57303874 57304093 -142326057 - MER50 LTR ERV1 -500 234 21 * 31 0 0 0 chr5 57304342 57304373 -142325777 + AT_rich Low_complexity Low_complexity 1 31 0 718 212 20 7 chr5 57304373 57304524 -142325626 - FRAM SINE Alu -23 153 1 232 262 159 47 chr5 57304955 57305062 -142325088 - L2 LINE L2 -13 3300 3182 504 261 22 15 chr5 57305111 57305245 -142324905 - L2 LINE L2 0 3313 3179 711 90 50 0 chr5 57305359 57305459 -142324691 - AluSq/x SINE Alu -207 105 1 193 277 60 90 chr5 57306462 57306628 -142323522 - L2 LINE L2 -206 3066 2906 572 222 42 48 chr5 57306939 57307128 -142323022 + MIR SINE MIR 69 256 -6 1234 174 26 52 chr5 57307167 57307437 -142322713 - AluJb SINE Alu -49 263 1 611 291 15 25 chr5 57308254 57308453 -142321697 - MIR SINE MIR -44 218 22 189 350 0 0 chr5 57308960 57309020 -142321130 + L2 LINE L2 3213 3272 0 582 297 101 5 chr5 57309070 57309289 -142320861 - MIR SINE MIR 0 262 23 1514 176 3 59 chr5 57309795 57310118 -142320032 - AluJb SINE Alu -7 305 1 1462 109 5 9 chr5 57310580 57310791 -142319359 + AluSc SINE Alu 93 302 -7 1117 257 38 23 chr5 57311056 57311402 -142318748 + MLT1I LTR MaLR 46 396 -13 24 75 0 0 chr5 57312363 57312403 -142317747 + AT_rich Low_complexity Low_complexity 1 40 0 5225 149 28 4 chr5 57312550 57314116 -142316034 - L1MA4A LINE L1 -250 6053 4442 180 0 0 0 chr5 57314116 57314136 -142316014 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 5225 149 28 4 chr5 57314136 57314307 -142315843 - L1MA4A LINE L1 -1861 4442 4277 611 242 5 49 chr5 57314341 57314564 -142315586 - AluJb SINE Alu -9 303 91 2214 79 33 13 chr5 57315611 57315914 -142314236 - AluSc SINE Alu 0 309 1 22 36 0 55 chr5 57315966 57316021 -142314129 + AT_rich Low_complexity Low_complexity 1 52 0 362 331 26 20 chr5 57316573 57316724 -142313426 - MER91A DNA MER1_type 0 196 45 600 180 0 0 chr5 57316724 57316824 -142313326 - FLAM_C SINE Alu -17 126 27 489 84 56 0 chr5 57317769 57317840 -142312310 - MADE1 DNA Mariner -2 78 4 983 217 5 0 chr5 57317851 57318035 -142312115 + MIR SINE MIR 28 212 -50 1005 203 55 23 chr5 57318622 57318839 -142311311 + MER58A DNA MER1_type 1 224 0 282 292 143 42 chr5 57319292 57319460 -142310690 + MIR SINE MIR 8 192 -70 466 226 125 42 chr5 57320940 57321108 -142309042 + MER63B DNA MER1_type 1 182 -254 303 174 22 11 chr5 57321108 57321200 -142308950 + (TGGA)n Simple_repeat Simple_repeat 4 96 0 6084 104 15 3 chr5 57321258 57322485 -142307665 - L1PA10 LINE L1 -30 6138 4900 3626 252 42 30 chr5 57322589 57324029 -142306121 - L1MEc LINE L1 -4906 1490 34 1194 164 22 113 chr5 57324340 57324658 -142305492 + MLT1A1 LTR MaLR 1 289 -76 21 71 0 0 chr5 57325327 57325369 -142304781 + AT_rich Low_complexity Low_complexity 1 42 0 2282 176 81 12 chr5 57325892 57326374 -142303776 + LTR53 LTR ERVL 1 515 -4 229 305 38 57 chr5 57327184 57327289 -142302861 - MIR SINE MIR -90 118 16 545 196 0 107 chr5 57327875 57328202 -142301948 - MLT1A1 LTR MaLR 0 365 74 2163 102 0 0 chr5 57328398 57328673 -142301477 - AluSg SINE Alu -35 275 1 23 33 0 0 chr5 57328676 57328706 -142301444 + AT_rich Low_complexity Low_complexity 1 30 0 813 164 0 29 chr5 57328716 57328856 -142301294 - FRAM SINE Alu -21 155 20 389 371 84 0 chr5 57329239 57329406 -142300744 + MIR3 SINE MIR 26 206 -2 2336 196 30 46 chr5 57329510 57330051 -142300099 + MLT1F LTR MaLR 11 542 0 315 139 19 0 chr5 57330363 57330428 -142299722 + Alu SINE Alu 2 53 -250 356 59 20 0 chr5 57332741 57332792 -142297358 + L1P3 LINE L1 1 52 -6094 * 6032 45 7 1 chr5 57332789 57333878 -142296272 + L1P3 LINE L1 4595 5686 -468 1131 241 75 13 chr5 57333990 57334297 -142295853 - MSTD LTR MaLR -67 329 4 578 297 24 20 chr5 57335296 57335545 -142294605 + MLT1J LTR MaLR 1 250 -261 1676 193 103 44 chr5 57335641 57335833 -142294317 - MER119 DNA MER1_type 0 583 404 2427 88 3 0 chr5 57335833 57336141 -142294009 - AluY SINE Alu -2 309 1 1676 193 103 44 chr5 57336141 57336445 -142293705 - MER119 DNA MER1_type -179 404 58 296 174 203 0 chr5 57337032 57337101 -142293049 + MLT1J LTR MaLR 384 466 -45 1292 182 146 4 chr5 57337908 57338161 -142291989 - AluJo SINE Alu -13 289 1 217 344 177 5 chr5 57338810 57339002 -142291148 + L2 LINE L2 3048 3272 0 737 187 26 19 chr5 57339230 57339423 -142290727 - FRAM SINE Alu 0 187 1 12098 132 11 60 chr5 57339559 57342121 -142288029 - L1P LINE L1 -1394 4752 2315 2108 111 17 0 chr5 57342284 57342572 -142287578 - AluSx SINE Alu -19 293 1 290 286 20 0 chr5 57342745 57342843 -142287307 - L1ME LINE L1 -543 5578 5479 194 330 152 27 chr5 57343501 57343613 -142286537 + L2 LINE L2 3138 3263 -9 1493 188 4 4 chr5 57343778 57344055 -142286095 + MER82 DNA MER2_type 2 278 -375 834 138 0 22 chr5 57344057 57344221 -142285929 - AluSg/x SINE Alu 0 310 176 947 144 40 35 chr5 57345829 57346003 -142284147 + FAM SINE Alu 1 175 0 546 253 128 23 chr5 57347014 57347279 -142282871 + LTR33 LTR ERVL 1 293 -228 263 348 30 30 chr5 57348647 57348782 -142281368 + L2 LINE L2 3125 3259 -13 310 219 16 0 chr5 57348824 57348888 -142281262 + L2 LINE L2 3229 3293 -20 186 103 0 0 chr5 57348895 57348924 -142281226 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 375 380 14 7 chr5 57349484 57349626 -142280524 + MIR SINE MIR 2 144 -118 434 226 0 0 chr5 57349886 57349992 -142280158 + MER103 DNA DNA 11 116 -50 215 169 15 46 chr5 57350137 57350202 -142279948 + A-rich Low_complexity Low_complexity 3 65 0 243 328 22 30 chr5 57355231 57355365 -142274785 - MER91A DNA MER1_type -63 133 1 890 209 107 0 chr5 57356203 57356390 -142273760 - MER20 DNA MER1_type -11 208 2 885 168 8 0 chr5 57356532 57356663 -142273487 + FLAM_C SINE Alu 2 133 0 1400 255 43 50 chr5 57356831 57357247 -142272903 - MLT1K LTR MaLR 0 588 176 1071 243 47 81 chr5 57357261 57357644 -142272506 + MLT1F1 LTR MaLR 6 400 -167 314 342 44 0 chr5 57358280 57358438 -142271712 + MIR SINE MIR 79 243 -19 304 304 44 44 chr5 57358572 57358707 -142271443 - MIR SINE MIR -108 154 20 2312 81 13 3 chr5 57361712 57362010 -142268140 + AluSp SINE Alu 5 305 -8 1766 175 84 47 chr5 57362112 57362494 -142267656 + MSTD LTR MaLR 1 396 0 2187 107 0 19 chr5 57363141 57363449 -142266701 + AluSg SINE Alu 1 302 -8 1528 171 0 19 chr5 57363582 57363840 -142266310 + AluJo SINE Alu 60 312 0 1443 229 169 50 chr5 57365346 57366220 -142263930 + L1M4 LINE L1 2418 3395 -2751 1849 252 87 40 chr5 57366226 57367096 -142263054 + L1M4 LINE L1 3535 4445 -1701 624 289 66 22 chr5 57367116 57367434 -142262716 - L1M4 LINE L1 -1359 4787 4456 237 132 0 0 chr5 57367565 57367603 -142262547 + (TTTTC)n Simple_repeat Simple_repeat 2 39 0 447 229 150 96 chr5 57367728 57367968 -142262182 - MER112 DNA MER1_type 0 260 8 510 219 19 0 chr5 57368658 57368763 -142261387 - MIR SINE MIR 0 262 156 1361 204 174 30 chr5 57368770 57369366 -142260784 + MER52A LTR ERV1 1 722 -1033 432 220 43 57 chr5 57369824 57369851 -142260299 + MLT1J2 LTR MaLR 1 27 -423 1688 222 22 22 chr5 57369851 57370216 -142259934 + MLT1A1 LTR MaLR 1 365 0 432 220 43 57 chr5 57370216 57370329 -142259821 + MLT1J2 LTR MaLR 27 139 -311 300 288 63 68 chr5 57370365 57370556 -142259594 + MLT1J2 LTR MaLR 259 448 -2 812 214 0 32 chr5 57370999 57371153 -142258997 - AluJb SINE Alu -30 282 134 183 354 123 0 chr5 57371316 57371381 -142258769 + L2 LINE L2 3147 3219 -53 182 289 0 0 chr5 57372768 57372813 -142257337 - MIR SINE MIR -108 154 110 1874 130 3 23 chr5 57375721 57376020 -142254130 + AluJb SINE Alu 1 293 -19 224 123 55 0 chr5 57376091 57376164 -142253986 + (TA)n Simple_repeat Simple_repeat 2 78 0 482 278 102 11 chr5 57376212 57376399 -142253751 - MIR SINE MIR -22 240 37 557 267 139 13 chr5 57379024 57379230 -142250920 - MIR SINE MIR 0 262 34 237 319 39 78 chr5 57380711 57380943 -142249207 + L2 LINE L2 2632 2854 -460 1685 220 56 52 chr5 57381163 57381699 -142248451 + MER68 LTR ERV1 25 562 0 405 277 144 56 chr5 57382425 57382620 -142247530 - L2 LINE L2 -5 3267 3056 199 224 20 7 chr5 57382938 57382987 -142247163 - MIR SINE MIR -104 104 57 188 302 171 8 chr5 57383019 57383148 -142247002 + L2 LINE L2 3159 3308 -5 2356 161 18 77 chr5 57383163 57383617 -142246533 - MLT2B2 LTR ERVL -8 507 81 249 57 0 0 chr5 57384249 57384284 -142245866 + (CA)n Simple_repeat Simple_repeat 2 36 0 314 264 27 27 chr5 57384333 57384443 -142245707 - MER5A DNA MER1_type -1 188 79 1418 194 15 40 chr5 57385711 57385984 -142244166 + AluJo SINE Alu 1 266 -46 221 53 53 0 chr5 57385998 57386036 -142244114 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1791 129 17 124 chr5 57386532 57386942 -142243208 - MER47A DNA MER2_type 0 366 1 207 0 0 0 chr5 57387914 57387937 -142242213 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1095 91 48 0 chr5 57387941 57388106 -142242044 - AluSq SINE Alu -25 288 116 495 284 25 56 chr5 57388965 57389127 -142241023 - MIR SINE MIR -77 185 29 207 0 0 0 chr5 57389428 57389451 -142240699 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1828 118 3 83 chr5 57390974 57391313 -142238837 - AluSx SINE Alu 0 312 1 1815 95 21 4 chr5 57391734 57391976 -142238174 + L1PA6 LINE L1 5906 6151 -3 996 78 31 0 chr5 57392005 57392133 -142238017 + AluY SINE Alu 1 132 -179 432 208 84 62 chr5 57392707 57392885 -142237265 + MIR SINE MIR 80 261 -1 1573 120 36 13 chr5 57393595 57393820 -142236330 - MER30 DNA MER1_type 0 230 1 28 29 0 0 chr5 57394419 57394454 -142235696 + AT_rich Low_complexity Low_complexity 1 35 0 935 177 67 0 chr5 57394896 57395060 -142235090 + MER45A DNA AcHobo 4 178 0 319 246 100 36 chr5 57396002 57396112 -142234038 - MIR SINE MIR -140 122 6 5648 161 45 18 chr5 57397219 57398229 -142231921 + MER52A LTR ERV1 718 1755 0 251 317 12 0 chr5 57398229 57398311 -142231839 - MIR SINE MIR -113 149 67 766 240 12 74 chr5 57400950 57401192 -142228958 + MIR SINE MIR 15 241 -21 275 270 150 10 chr5 57401236 57401336 -142228814 - MIR SINE MIR -71 191 78 15104 135 18 17 chr5 57401436 57403846 -142226304 - Tigger1 DNA MER2_type -1 2417 7 450 339 164 14 chr5 57403847 57404487 -142225663 - L2 LINE L2 -1060 2254 1519 985 182 0 39 chr5 57404508 57404689 -142225461 + AluJo SINE Alu 1 174 -138 1897 192 0 0 chr5 57404899 57405211 -142224939 + AluJb SINE Alu 1 312 0 2010 153 138 11 chr5 57405331 57405709 -142224441 + MSTA LTR MaLR 1 426 -2 1045 168 4 49 chr5 57406000 57406244 -142223906 + AluSg SINE Alu 1 233 -77 276 344 80 49 chr5 57406598 57406924 -142223226 - L2 LINE L2 -19 3253 2918 2266 87 10 0 chr5 57407095 57407394 -142222756 - AluSc SINE Alu -6 303 2 482 312 181 0 chr5 57408200 57408421 -142221729 + MIR SINE MIR 2 262 0 424 295 47 0 chr5 57408439 57408568 -142221582 - MIR SINE MIR -53 209 75 213 39 0 0 chr5 57409245 57409271 -142220879 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 349 273 102 17 chr5 57409934 57410110 -142220040 - MIR SINE MIR -70 192 2 205 176 0 0 chr5 57412292 57412326 -142217824 + (TG)n Simple_repeat Simple_repeat 1 34 0 2241 100 13 3 chr5 57412528 57412828 -142217322 + AluSx SINE Alu 1 303 -9 2304 89 7 3 chr5 57414749 57415051 -142215099 - AluSc SINE Alu -6 303 1 228 333 0 40 chr5 57415071 57415197 -142214953 - MER5A DNA MER1_type -25 164 44 1974 134 59 42 chr5 57416379 57416737 -142213413 - THE1B LTR MaLR 0 364 1 11833 90 11 1 chr5 57416737 57418301 -142211849 - THE1B-int LTR MaLR 0 1580 1 2318 134 5 32 chr5 57418301 57418675 -142211475 - THE1B LTR MaLR 0 364 1 504 228 35 121 chr5 57418692 57418924 -142211226 + MLT1E2 LTR MaLR 1 212 -414 967 180 73 30 chr5 57419078 57419158 -142210992 - MER33 DNA MER1_type -2308 277 202 1986 96 0 8 chr5 57419158 57419464 -142210686 + AluY SINE Alu 26 329 0 967 180 73 30 chr5 57419464 57419648 -142210502 - MER33 DNA MER1_type -2383 202 1 2655 37 0 3 chr5 57419677 57419977 -142210173 - AluY SINE Alu -12 299 1 2224 251 136 59 chr5 57419985 57420062 -142210088 + HAL1 LINE L1 822 892 -1615 1816 249 63 6 chr5 57420062 57420552 -142209598 + LTR40a LTR ERVL 1 518 -1 2224 251 136 59 chr5 57420552 57422038 -142208112 + HAL1 LINE L1 892 2506 -1 3023 103 133 145 chr5 57422532 57423346 -142206804 + pTR5 LTR ERV1 1312 2438 0 2255 85 0 39 chr5 57423551 57423856 -142206294 + AluY SINE Alu 1 293 -18 192 268 146 24 chr5 57424067 57424149 -142206001 - MIR3 SINE MIR -51 157 66 1757 169 24 0 chr5 57424622 57424918 -142205232 - AluJb SINE Alu -6 306 4 1412 182 191 9 chr5 57425588 57425923 -142204227 + MSTD LTR MaLR 1 396 0 4198 165 38 34 chr5 57425929 57425953 -142204197 - L1MA9 LINE L1 -60 6252 6230 1917 154 138 16 chr5 57425953 57426395 -142203755 - LTR54B LTR ERV1 -2 496 1 4198 165 38 34 chr5 57426395 57426865 -142203285 - L1MA9 LINE L1 -82 6230 5751 297 0 0 0 chr5 57426865 57426898 -142203252 + (CA)n Simple_repeat Simple_repeat 2 34 0 4198 165 38 34 chr5 57426898 57427279 -142202871 - L1MA9 LINE L1 -561 5751 5373 21 0 0 0 chr5 57427695 57427716 -142202434 + AT_rich Low_complexity Low_complexity 1 21 0 293 293 58 21 chr5 57427961 57428149 -142202001 - L1M4 LINE L1 -1322 4824 4630 288 290 34 38 chr5 57428712 57428848 -142201302 - MIR SINE MIR -71 137 30 951 227 110 32 chr5 57429490 57429772 -142200378 + MLT1C LTR MaLR 164 467 0 4228 112 56 30 chr5 57429788 57429934 -142200216 + L1PA16 LINE L1 5462 5603 -563 2328 101 0 3 chr5 57429934 57430231 -142199919 + AluSg SINE Alu 1 296 -14 4228 112 56 30 chr5 57430231 57430762 -142199388 + L1PA16 LINE L1 5603 6157 -9 1853 179 16 3 chr5 57430777 57431095 -142199055 - MER68 LTR ERV1 -240 322 1 1455 218 81 0 chr5 57431096 57431431 -142198719 - L1ME1 LINE L1 -48 6118 5757 2489 216 41 19 chr5 57431444 57432078 -142198072 - L1ME1 LINE L1 -1007 5139 4492 2270 113 0 0 chr5 57432368 57432661 -142197489 + AluSx SINE Alu 1 293 -19 556 192 50 35 chr5 57433504 57433683 -142196467 - MLT1I LTR MaLR 0 409 266 292 214 18 0 chr5 57433754 57433810 -142196340 - MLT1I LTR MaLR -290 119 63 401 241 9 18 chr5 57433978 57434090 -142196060 + FLAM_C SINE Alu 1 111 -22 221 299 41 0 chr5 57434915 57435012 -142195138 + MIR SINE MIR 118 218 -44 210 255 0 0 chr5 57435927 57435978 -142194172 + MIR SINE MIR 81 131 -77 345 47 0 0 chr5 57436050 57436093 -142194057 + (TG)n Simple_repeat Simple_repeat 2 44 0 1792 177 3 3 chr5 57436558 57436858 -142193292 + AluJb SINE Alu 13 312 0 413 285 110 22 chr5 57437048 57437367 -142192783 + L1ME4a LINE L1 5552 5898 -223 321 221 132 29 chr5 57437482 57437618 -142192532 + MIR SINE MIR 65 214 -48 286 328 15 88 chr5 57438723 57438927 -142191223 + MER5A DNA MER1_type 1 189 0 387 0 0 0 chr5 57440619 57440662 -142189488 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 2881 52 3 11 chr5 57441337 57441703 -142188447 - L1PA6 LINE L1 0 6154 5792 1660 150 23 49 chr5 57441778 57442084 -142188066 - AluJo SINE Alu -4 308 11 1310 14 0 0 chr5 57442108 57442256 -142187894 - L1PA2 LINE L1 0 6155 6008 849 249 60 0 chr5 57442267 57442500 -142187650 - MIR SINE MIR -14 248 2 355 183 0 14 chr5 57442833 57442904 -142187246 - L1 LINE L1 -2138 4008 3939 232 249 6 95 chr5 57442987 57443156 -142186994 - LTR41 LTR ERVL -36 737 584 1861 130 50 3 chr5 57443633 57443932 -142186218 - AluSq SINE Alu 0 313 1 349 265 136 15 chr5 57443944 57444076 -142186074 - LTR41 LTR ERVL -620 153 6 895 269 83 20 chr5 57444337 57444638 -142185512 - ERVL LTR ERVL -286 5478 5159 2336 91 0 3 chr5 57447433 57447730 -142182420 - AluSq SINE Alu -13 300 5 362 207 52 96 chr5 57448042 57448202 -142181948 + MIR3 SINE MIR 7 159 -49 465 238 210 32 chr5 57448922 57449170 -142180980 - L2 LINE L2 -1252 2062 1771 478 231 143 7 chr5 57450607 57450754 -142179396 - MER5A DNA MER1_type -2 187 21 232 167 0 0 chr5 57452454 57452496 -142177654 + MIR SINE MIR 103 144 -118 210 323 0 0 chr5 57452510 57452572 -142177578 - MER5A DNA MER1_type 0 189 128 242 221 10 29 chr5 57453292 57453396 -142176754 + (CATA)n Simple_repeat Simple_repeat 2 103 0 256 182 0 36 chr5 57454188 57454243 -142175907 + CT-rich Low_complexity Low_complexity 2 54 0 208 291 70 12 chr5 57454945 57455031 -142175119 - MER91C DNA MER1_type 0 140 50 233 250 125 58 chr5 57456156 57456260 -142173890 - MIR SINE MIR -91 171 61 1517 258 101 7 chr5 57456533 57456940 -142173210 - MLT1J LTR MaLR -3 508 64 210 167 0 0 chr5 57457304 57457340 -142172810 + T-rich Low_complexity Low_complexity 2 37 0 1096 138 0 67 chr5 57457527 57457722 -142172428 + AluSg/x SINE Alu 131 312 0 448 327 18 22 chr5 57458000 57458223 -142171927 - LTR33 LTR ERVL -299 222 1 369 257 27 80 chr5 57458348 57458535 -142171615 - MIR SINE MIR -1 261 85 242 294 33 33 chr5 57458643 57458735 -142171415 - MIR SINE MIR -76 186 95 211 286 77 22 chr5 57459474 57459565 -142170585 + MIR SINE MIR 38 133 -129 514 176 123 16 chr5 57460551 57460738 -142169412 - MER5C DNA MER1_type 0 324 118 213 293 53 13 chr5 57460767 57460842 -142169308 - MER5C DNA MER1_type -205 119 42 1673 228 45 60 chr5 57461002 57461515 -142168635 - MLT1D LTR MaLR 0 505 1 188 377 28 0 chr5 57462088 57462194 -142167956 + MER5A DNA MER1_type 79 187 -2 184 293 0 0 chr5 57462236 57462277 -142167873 + MIR SINE MIR 35 75 -133 1091 180 5 36 chr5 57462322 57462544 -142167606 + MER20 DNA MER1_type 1 215 -4 400 245 151 28 chr5 57462553 57462765 -142167385 - LTR16A1 LTR ERVL -52 405 168 922 197 69 15 chr5 57463158 57463361 -142166789 - MLT1C LTR MaLR -1 466 253 2261 155 88 5 chr5 57463481 57463901 -142166249 + MER90 LTR ERV1 155 609 -5 2628 196 16 40 chr5 57464098 57464125 -142166025 - MLT2B3 LTR ERVL -15 539 513 327 49 0 0 chr5 57464125 57464166 -142165984 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 2628 196 16 40 chr5 57464166 57464683 -142165467 - MLT2B3 LTR ERVL -41 513 8 319 313 36 36 chr5 57464686 57464881 -142165269 - MIR SINE MIR -21 241 47 202 258 16 0 chr5 57465821 57465883 -142164267 + L2 LINE L2 3251 3313 0 236 269 56 97 chr5 57465913 57466129 -142164021 - MLT1K LTR MaLR -191 397 191 1954 148 91 46 chr5 57466298 57466671 -142163479 - MLT1B LTR MaLR 0 390 1 2364 125 87 0 chr5 57467029 57467479 -142162671 - MER1A DNA MER1_type 0 529 2 996 203 17 8 chr5 57468616 57468852 -142161298 + L1MC3 LINE L1 7545 7782 -3 536 195 73 73 chr5 57468884 57469048 -142161102 + L1MC5 LINE L1 7763 7926 -35 253 216 7 29 chr5 57469146 57469190 -142160960 + (TA)n Simple_repeat Simple_repeat 1 44 -92 1329 194 80 21 chr5 57469190 57469515 -142160635 - MER2 DNA MER2_type 0 344 1 253 216 7 29 chr5 57469515 57469609 -142160541 + (TA)n Simple_repeat Simple_repeat 44 136 0 3784 130 61 90 chr5 57470208 57471460 -142158690 + pTR5 LTR ERV1 6 613 -101 2044 86 0 0 chr5 57471460 57471717 -142158433 + AluY SINE Alu 24 280 -31 3784 130 61 90 chr5 57471717 57471817 -142158333 + pTR5 LTR ERV1 613 714 0 192 335 63 48 chr5 57472194 57472400 -142157750 + L2 LINE L2 2844 3052 -220 450 179 0 0 chr5 57472401 57472468 -142157682 + AluJ/FLAM SINE Alu 2 68 -244 243 310 0 0 chr5 57472540 57472598 -142157552 + L2 LINE L2 3211 3268 -4 188 231 0 58 chr5 57474286 57474338 -142155812 + L2 LINE L2 3019 3067 -205 453 241 163 0 chr5 57474714 57474855 -142155295 - MER5A DNA MER1_type 0 189 26 904 266 71 75 chr5 57474857 57475324 -142154826 - MLT1J LTR MaLR -44 467 3 228 254 34 17 chr5 57476623 57476682 -142153468 - LTR38 LTR ERV1 0 556 497 * 1044 136 62 0 chr5 57476668 57476845 -142153305 + MER49 LTR ERV1 103 290 -633 828 170 52 0 chr5 57476825 57476960 -142153190 + MER49 LTR ERV1 611 752 -171 * 322 250 53 53 chr5 57477121 57477253 -142152897 + LOR1-int LTR ERV1 7365 7496 -624 3346 112 89 14 chr5 57577451 57577688 -142052462 + Tigger3(Golem) DNA MER2_type 2392 2610 -418 200 35 35 0 chr5 57577688 57577717 -142052433 + (CTCA)n Simple_repeat Simple_repeat 1 30 0 3346 112 89 14 chr5 57577717 57578071 -142052079 + Tigger3(Golem) DNA MER2_type 2610 3028 0 276 223 21 43 chr5 57578073 57578167 -142051983 - MIR SINE MIR -64 198 107 1670 174 74 0 chr5 57578167 57578506 -142051644 - MLT1B LTR MaLR 0 390 27 493 306 63 66 chr5 57578689 57579085 -142051065 - L2 LINE L2 -20 3293 2899 315 250 34 11 chr5 57579182 57579270 -142050880 + MIR SINE MIR 43 132 -76 632 169 0 7 chr5 57579428 57579564 -142050586 + (TCTA)n Simple_repeat Simple_repeat 2 136 0 189 107 0 0 chr5 57579813 57579841 -142050309 + (TGGGGG)n Simple_repeat Simple_repeat 6 33 0 595 306 44 37 chr5 57580061 57580358 -142049792 + L2 LINE L2 2921 3219 -94 307 262 78 29 chr5 57580620 57580723 -142049427 + MIR SINE MIR 103 210 -52 734 197 27 14 chr5 57582302 57582449 -142047701 + MER5B DNA MER1_type 5 153 -25 298 359 120 21 chr5 57582475 57582667 -142047483 + L2 LINE L2 2974 3184 -88 605 312 39 5 chr5 57583342 57583547 -142046603 + MIR SINE MIR 48 259 -3 377 20 20 0 chr5 57584598 57584648 -142045502 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 1868 208 10 10 chr5 57585374 57585764 -142044386 + MLT1B LTR MaLR 1 390 0 252 299 153 15 chr5 57586954 57587091 -142043059 + MIR SINE MIR 103 258 -4 30139 97 7 15 chr5 57587232 57592807 -142037343 - L1PA7 LINE L1 -1 6153 628 200 214 36 18 chr5 57593410 57593466 -142036684 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 321 26 0 0 chr5 57593466 57593504 -142036646 + (TG)n Simple_repeat Simple_repeat 1 38 0 250 182 239 11 chr5 57593508 57593596 -142036554 + MER3 DNA MER1_type 69 129 -80 366 305 135 1 chr5 57593854 57594039 -142036111 - MIR SINE MIR -58 204 1 1188 209 50 75 chr5 57595635 57596062 -142034088 - MLT1C LTR MaLR 0 467 45 245 143 0 20 chr5 57598270 57598319 -142031831 + (TA)n Simple_repeat Simple_repeat 2 49 0 35 0 0 0 chr5 57599125 57599160 -142030990 + AT_rich Low_complexity Low_complexity 1 35 0 704 237 67 10 chr5 57599547 57599741 -142030409 - MER20 DNA MER1_type -14 205 1 1527 116 0 9 chr5 57599935 57600159 -142029991 + AluSc SINE Alu 84 305 -4 185 0 40 0 chr5 57600240 57600265 -142029885 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 379 216 82 10 chr5 57601078 57601175 -142028975 - MIR SINE MIR -56 206 103 980 69 19 6 chr5 57601232 57601392 -142028758 + (TAGA)n Simple_repeat Simple_repeat 3 164 0 364 267 59 59 chr5 57601533 57601720 -142028430 + MER5A DNA MER1_type 3 189 0 840 309 56 47 chr5 57601749 57602264 -142027886 + LTR33 LTR ERVL 1 520 -1 266 226 0 16 chr5 57605041 57605103 -142025047 + MLT1K LTR MaLR 187 247 -341 279 279 15 0 chr5 57605647 57605715 -142024435 + L2 LINE L2 2987 3055 -217 188 65 0 32 chr5 57606565 57606596 -142023554 + (TTTTC)n Simple_repeat Simple_repeat 1 30 0 30 0 0 0 chr5 57606939 57606969 -142023181 + AT_rich Low_complexity Low_complexity 1 30 0 2099 206 85 40 chr5 57607546 57608089 -142022061 - MLT1F1 LTR MaLR 0 567 1 294 135 0 0 chr5 57608167 57608219 -142021931 + L1MB8 LINE L1 6123 6174 -4 487 300 0 8 chr5 57608345 57608475 -142021675 - MER63A DNA MER1_type -1 209 81 29 28 0 0 chr5 57609833 57609869 -142020281 + AT_rich Low_complexity Low_complexity 1 36 0 298 288 106 59 chr5 57610089 57610259 -142019891 + MIR3 SINE MIR 8 185 -23 * 511 212 281 0 chr5 57610235 57610381 -142019769 + L2 LINE L2 2544 2730 -584 189 365 12 0 chr5 57610389 57610474 -142019676 + MIR SINE MIR 158 243 -19 * 655 271 176 29 chr5 57610469 57610979 -142019171 - L2 LINE L2 0 3313 2680 238 246 0 0 chr5 57611515 57611572 -142018578 - MIR SINE MIR -21 241 185 662 240 26 19 chr5 57611663 57611817 -142018333 + MIR SINE MIR 14 168 -94 760 326 19 8 chr5 57613430 57613688 -142016462 + MIR SINE MIR 2 262 0 184 295 33 0 chr5 57613797 57613858 -142016292 - MIR SINE MIR -17 245 183 1973 92 0 83 chr5 57615942 57616280 -142013870 + AluY SINE Alu 1 310 -1 180 0 0 0 chr5 57616300 57616320 -142013830 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 290 234 0 121 chr5 57616461 57616585 -142013565 - MER58A DNA MER1_type -1 223 115 2177 154 8 8 chr5 57616596 57616967 -142013183 + L1PB3 LINE L1 5782 6152 -2 26 0 0 0 chr5 57616967 57616993 -142013157 + AT_rich Low_complexity Low_complexity 1 26 0 384 274 18 9 chr5 57617019 57617132 -142013018 - MER58A DNA MER1_type 0 118 5 372 133 0 0 chr5 57617352 57617412 -142012738 + (TTCCC)n Simple_repeat Simple_repeat 1 60 0 2054 122 3 3 chr5 57617412 57617698 -142012452 - AluSx SINE Alu -26 286 1 384 299 127 20 chr5 57619437 57619634 -142010516 + MIR SINE MIR 31 248 -14 2339 117 3 0 chr5 57619742 57620051 -142010099 - AluSg SINE Alu 0 310 1 21 0 0 0 chr5 57620169 57620190 -142009960 + AT_rich Low_complexity Low_complexity 1 21 0 1551 175 14 34 chr5 57621544 57621841 -142008309 - AluJb SINE Alu -21 291 1 760 237 23 0 chr5 57623601 57623774 -142006376 + MER45A DNA AcHobo 2 178 0 698 176 141 0 chr5 57624526 57624668 -142005482 + FAM SINE Alu 13 174 -11 1537 186 8 79 chr5 57624671 57625052 -142005098 + MLT1B LTR MaLR 34 387 -3 33 43 0 0 chr5 57626177 57626224 -142003926 + AT_rich Low_complexity Low_complexity 1 47 0 365 315 112 52 chr5 57628046 57628655 -142001495 + L1M4 LINE L1 4487 5131 -1015 258 136 0 0 chr5 57629170 57629214 -142000936 + (T)n Simple_repeat Simple_repeat 1 44 0 181 321 62 62 chr5 57629691 57629884 -142000266 - L3 LINE CR1 -1199 378 186 219 293 61 30 chr5 57630164 57630263 -141999887 + MIR SINE MIR 158 259 -3 406 268 94 16 chr5 57630384 57630511 -141999639 - MIR SINE MIR -92 170 34 287 234 9 19 chr5 57631739 57631846 -141998304 + (TTTA)n Simple_repeat Simple_repeat 4 109 0 1873 139 45 3 chr5 57631877 57632165 -141997985 - AluSx SINE Alu -10 302 3 316 370 76 33 chr5 57632960 57633171 -141996979 - MIR SINE MIR -30 232 13 1521 210 42 14 chr5 57633599 57634033 -141996117 - Charlie4a DNA MER1_type -17 491 46 887 231 152 16 chr5 57634377 57634753 -141995397 + L1MC4 LINE L1 7004 7430 -612 258 172 17 17 chr5 57634769 57634827 -141995323 + L1MC4 LINE L1 7501 7558 -484 1302 213 96 22 chr5 57635091 57635457 -141994693 - MLT1D LTR MaLR 0 505 113 445 326 40 35 chr5 57635981 57636208 -141993942 - MIR SINE MIR -12 250 23 237 340 52 39 chr5 57637928 57638081 -141992069 - MER5A DNA MER1_type 0 189 35 65 50 0 0 chr5 57638688 57638788 -141991362 + AT_rich Low_complexity Low_complexity 1 100 0 270 160 0 0 chr5 57638833 57638883 -141991267 - MER58 DNA MER1_type 0 2420 2371 845 235 59 0 chr5 57638893 57639114 -141991036 - MER58 DNA MER1_type -2185 235 2 389 255 0 20 chr5 57639114 57639212 -141990938 - MIR3 SINE MIR -47 161 66 8568 169 9 19 chr5 57639377 57639869 -141990281 + L1PB1 LINE L1 3408 3904 -2247 2371 60 0 0 chr5 57639869 57640184 -141989966 + AluY SINE Alu 1 315 0 8568 169 9 19 chr5 57640184 57642463 -141987687 + L1PB1 LINE L1 3904 6151 0 194 311 0 0 chr5 57642578 57642623 -141987527 - L3 LINE CR1 -15 1562 1518 198 266 62 31 chr5 57642911 57642975 -141987175 + L2 LINE L2 3189 3254 -18 206 279 228 0 chr5 57643182 57643261 -141986889 + L2 LINE L2 3216 3312 -1 4038 148 34 27 chr5 57645331 57646134 -141984016 - L1MC2 LINE L1 -23 6321 5514 383 301 102 21 chr5 57646292 57646478 -141983672 + MIR SINE MIR 47 247 -15 22 0 0 30 chr5 57647124 57647137 -141983013 + AT_rich Low_complexity Low_complexity 1 13 -19 2110 105 7 0 chr5 57647137 57647413 -141982737 + AluSc SINE Alu 11 288 -21 22 0 0 30 chr5 57647413 57647432 -141982718 + AT_rich Low_complexity Low_complexity 13 32 0 7075 86 16 5 chr5 57648883 57649895 -141980255 - L1P3 LINE L1 -5438 1023 1 1384 253 119 19 chr5 57650109 57650580 -141979570 + MLT1H LTR MaLR 14 531 -18 1519 167 15 62 chr5 57650786 57651110 -141979040 - AluJo SINE Alu -1 311 3 23 108 0 0 chr5 57651313 57651406 -141978744 + AT_rich Low_complexity Low_complexity 1 93 0 2247 226 73 46 chr5 57651480 57651533 -141978617 + L1ME2 LINE L1 5285 5335 -829 3219 178 27 15 chr5 57651533 57652206 -141977944 + L1MC1 LINE L1 5653 6333 0 2247 226 73 46 chr5 57652206 57653000 -141977150 + L1ME2 LINE L1 5335 6155 -9 724 272 0 6 chr5 57653262 57653431 -141976719 + MER45A DNA AcHobo 4 171 -7 1776 182 99 23 chr5 57653878 57654312 -141975838 + MLT1C LTR MaLR 1 467 0 473 311 16 33 chr5 57654493 57654676 -141975474 + MER5A DNA MER1_type 10 189 0 2471 71 0 6 chr5 57654946 57655257 -141974893 - AluY SINE Alu -2 309 1 5074 77 1 23 chr5 57655781 57656481 -141973669 - L1PA8A LINE L1 0 6131 5447 287 299 0 11 chr5 57657105 57657192 -141972958 + (TG)n Simple_repeat Simple_repeat 2 87 0 936 54 0 0 chr5 57658184 57658318 -141971832 + AluY SINE Alu 173 306 0 221 211 0 63 chr5 57658444 57658539 -141971611 + A-rich Low_complexity Low_complexity 1 89 0 2410 48 0 10 chr5 57658782 57659077 -141971073 - AluY SINE Alu -19 292 1 1924 76 3 90 chr5 57659784 57660074 -141970076 - AluSc SINE Alu -8 301 37 560 330 91 37 chr5 57660463 57660924 -141969226 + L2 LINE L2 2302 2787 -527 247 320 0 103 chr5 57661077 57661174 -141968976 + L2 LINE L2 3005 3091 -181 523 345 39 63 chr5 57661514 57661831 -141968319 + L2 LINE L2 2376 2699 -615 279 0 0 0 chr5 57661831 57661862 -141968288 + (TC)n Simple_repeat Simple_repeat 2 32 0 1674 185 4 7 chr5 57661862 57662143 -141968007 - AluJb SINE Alu -28 284 5 523 345 39 63 chr5 57662143 57662236 -141967914 + L2 LINE L2 2697 2777 -537 607 329 90 29 chr5 57662236 57662546 -141967604 + L2 LINE L2 2982 3310 -3 2261 177 76 5 chr5 57662844 57663280 -141966870 - MLT1C LTR MaLR 0 467 1 26 30 0 0 chr5 57663283 57663316 -141966834 + AT_rich Low_complexity Low_complexity 1 33 0 344 282 70 26 chr5 57663339 57663495 -141966655 - L2 LINE L2 0 3313 3151 2161 119 0 3 chr5 57663593 57663888 -141966262 + AluSq SINE Alu 1 294 -19 406 196 20 0 chr5 57663888 57663990 -141966160 + (TA)n Simple_repeat Simple_repeat 1 104 0 2149 117 7 0 chr5 57665050 57665341 -141964809 - AluSx SINE Alu -19 293 1 23 54 0 0 chr5 57666431 57666468 -141963682 + AT_rich Low_complexity Low_complexity 1 37 0 185 284 25 49 chr5 57667879 57667916 -141962234 - MER5A DNA MER1_type -18 171 135 3667 89 25 4 chr5 57667916 57668443 -141961707 + L1PA13 LINE L1 5626 6163 0 185 284 25 49 chr5 57668443 57668486 -141961664 - MER5A DNA MER1_type -54 135 93 566 310 125 40 chr5 57670636 57671210 -141958940 - L2 LINE L2 -18 3254 2624 2947 99 34 78 chr5 57671483 57672007 -141958143 + L1PA14 LINE L1 5658 6158 -3 252 59 0 0 chr5 57672545 57672579 -141957571 + (TG)n Simple_repeat Simple_repeat 2 35 0 225 270 14 40 chr5 57673033 57673107 -141957043 - MER5C DNA MER1_type -249 75 4 225 0 0 0 chr5 57673517 57673542 -141956608 + (TA)n Simple_repeat Simple_repeat 1 25 0 180 200 0 0 chr5 57673781 57673821 -141956329 + CT-rich Low_complexity Low_complexity 2 41 0 21 0 0 0 chr5 57673886 57673907 -141956243 + AT_rich Low_complexity Low_complexity 1 21 0 310 313 0 27 chr5 57674782 57674894 -141955256 - MIR SINE MIR -45 217 109 867 261 33 14 chr5 57674908 57675123 -141955027 + MIR SINE MIR 23 241 -21 292 250 193 0 chr5 57675398 57675486 -141954664 - MIR SINE MIR -56 206 102 41 36 0 0 chr5 57675859 57675914 -141954236 + AT_rich Low_complexity Low_complexity 1 55 0 395 309 52 33 chr5 57678108 57678318 -141951832 + L2 LINE L2 3078 3291 -22 365 263 0 30 chr5 57678659 57678758 -141951392 - L2 LINE L2 0 3313 3218 864 83 0 0 chr5 57680254 57680363 -141949787 + AluSq/x SINE Alu 5 113 -200 7349 35 1 8 chr5 57680363 57681704 -141948446 + L1PA4 LINE L1 4821 6155 0 21 0 0 0 chr5 57681707 57681728 -141948422 + AT_rich Low_complexity Low_complexity 1 21 0 404 349 60 28 chr5 57683030 57683314 -141946836 + L1MEc LINE L1 712 1004 -5392 499 277 6 28 chr5 57683648 57683825 -141946325 - MER97c DNA MER1_type? -913 177 5 450 305 15 0 chr5 57684303 57684434 -141945716 + MLT1I LTR MaLR 1 133 -276 490 214 20 0 chr5 57684536 57684634 -141945516 + MLT1I LTR MaLR 305 404 -5 5584 153 41 0 chr5 57685298 57686229 -141943921 - Tigger1 DNA MER2_type -1449 969 1 693 160 46 15 chr5 57687509 57687640 -141942510 + Tigger1 DNA MER2_type 970 1104 -1314 * 9336 115 9 0 chr5 57687634 57688988 -141941162 + Tigger1 DNA MER2_type 1047 2412 -6 182 254 62 100 chr5 57689076 57689206 -141940944 + MIR SINE MIR 90 214 -48 271 337 66 15 chr5 57690448 57690622 -141939528 - MIR SINE MIR -59 203 25 1703 153 19 48 chr5 57691246 57691560 -141938590 + AluJb SINE Alu 1 305 -7 1010 237 164 36 chr5 57691716 57692130 -141938020 + MLT1C LTR MaLR 1 467 0 527 170 121 18 chr5 57692413 57692578 -141937572 - MER53 DNA DNA 0 189 8 432 228 148 63 chr5 57692601 57692858 -141937292 - MLT2E LTR ERVL -353 310 6 21 0 0 0 chr5 57692858 57692879 -141937271 + AT_rich Low_complexity Low_complexity 1 21 0 309 333 65 21 chr5 57692999 57693185 -141936965 - MIR3 SINE MIR -11 197 4 24 0 0 0 chr5 57694385 57694409 -141935741 + AT_rich Low_complexity Low_complexity 1 24 0 752 221 46 20 chr5 57694680 57694875 -141935275 - MLT1C LTR MaLR 0 467 268 191 81 216 0 chr5 57695625 57695662 -141934488 - MIR SINE MIR -97 165 121 2117 99 0 3 chr5 57696105 57696417 -141933733 + AluSg SINE Alu 1 311 0 235 333 9 9 chr5 57696518 57696632 -141933518 - L1ME LINE L1 -526 5595 5482 924 301 48 46 chr5 57698210 57698645 -141931505 + L2 LINE L2 2878 3313 0 24 32 0 0 chr5 57698851 57698882 -141931268 + AT_rich Low_complexity Low_complexity 1 31 0 2191 124 0 6 chr5 57698956 57699270 -141930880 + AluSx SINE Alu 1 312 0 243 188 0 0 chr5 57699272 57699320 -141930830 + GA-rich Low_complexity Low_complexity 2 49 0 637 171 29 23 chr5 57699346 57699521 -141930629 + GA-rich Low_complexity Low_complexity 4 179 0 369 0 0 0 chr5 57699526 57699567 -141930583 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 648 301 158 30 chr5 57699843 57700241 -141929909 - LTR16A LTR ERVL 0 450 2 1308 271 77 30 chr5 57700246 57700715 -141929435 + LTR16C LTR ERVL 1 491 0 216 347 13 0 chr5 57700820 57700895 -141929255 - MIR SINE MIR -90 118 43 261 328 40 57 chr5 57701090 57701267 -141928883 - MIR SINE MIR -57 205 32 1676 169 15 4 chr5 57701526 57701798 -141928352 + AluSx SINE Alu 1 275 -37 294 29 0 0 chr5 57701805 57701840 -141928310 + (CAA)n Simple_repeat Simple_repeat 2 36 0 43089 46 5 1 chr5 57703028 57709149 -141921001 + L1PA4 LINE L1 7 6152 -3 5158 37 0 2 chr5 57709354 57709969 -141920181 + L1PA5 LINE L1 5528 6141 -13 21 36 0 0 chr5 57709969 57709997 -141920153 + AT_rich Low_complexity Low_complexity 1 28 0 242 352 16 32 chr5 57710321 57710349 -141919801 - MIR SINE MIR -112 150 123 2327 114 77 15 chr5 57710349 57710752 -141919398 + MSTA LTR MaLR 1 428 0 242 352 16 32 chr5 57710752 57710848 -141919302 - MIR SINE MIR -139 123 28 1015 222 46 60 chr5 57712563 57712978 -141917172 + L1MD1 LINE L1 4989 5397 -749 1601 179 0 31 chr5 57712978 57713427 -141916723 + AluJo SINE Alu 1 440 0 968 219 0 24 chr5 57713434 57713639 -141916511 - AluJb SINE Alu -112 200 1 180 111 0 0 chr5 57713640 57713667 -141916483 + (GA)n Simple_repeat Simple_repeat 1 27 0 533 212 175 90 chr5 57713670 57714140 -141916010 + L1MD1 LINE L1 5385 5905 -337 476 165 22 11 chr5 57714146 57714237 -141915913 + Tigger5 DNA MER2_type 6 97 -2226 * 1456 126 52 0 chr5 57714230 57714460 -141915690 + Tigger5 DNA MER2_type 2081 2322 -1 778 239 8 59 chr5 57714462 57714717 -141915433 + L1ME1 LINE L1 5904 6145 -21 28 29 0 0 chr5 57714717 57714752 -141915398 + AT_rich Low_complexity Low_complexity 1 35 0 893 305 0 4 chr5 57714924 57715170 -141914980 - MIR SINE MIR -15 247 3 23 33 0 0 chr5 57715377 57715407 -141914743 + AT_rich Low_complexity Low_complexity 1 30 0 868 161 0 14 chr5 57715762 57715905 -141914245 - FLAM_C SINE Alu -2 141 1 478 223 117 18 chr5 57717587 57717822 -141912328 + L1MC/D LINE L1 5526 5792 -460 24 0 0 0 chr5 57717941 57717965 -141912185 + AT_rich Low_complexity Low_complexity 1 24 0 267 210 113 0 chr5 57719799 57719861 -141910289 + L2 LINE L2 2727 2795 -519 2429 87 0 0 chr5 57719995 57720295 -141909855 + AluSg SINE Alu 1 300 -10 554 301 98 19 chr5 57720302 57720558 -141909592 + L2 LINE L2 3038 3313 0 1805 170 42 8 chr5 57720823 57721176 -141908974 + MLT1A1 LTR MaLR 1 365 0 270 239 195 44 chr5 57721360 57721473 -141908677 + MIR SINE MIR 29 158 -104 25 51 0 0 chr5 57721682 57721721 -141908429 + AT_rich Low_complexity Low_complexity 1 39 0 1230 180 19 0 chr5 57721736 57721942 -141908208 + MER20 DNA MER1_type 6 215 -4 2468 87 0 0 chr5 57722981 57723280 -141906870 - AluSx SINE Alu -12 300 2 272 417 35 9 chr5 57723296 57723411 -141906739 - L2 LINE L2 -21 3251 3134 31 76 0 0 chr5 57724119 57724185 -141905965 + AT_rich Low_complexity Low_complexity 1 66 0 21 0 0 0 chr5 57724200 57724221 -141905929 + AT_rich Low_complexity Low_complexity 1 21 0 217 290 137 48 chr5 57724339 57724463 -141905687 - MIR SINE MIR -38 224 90 21 71 0 0 chr5 57725075 57725117 -141905033 + AT_rich Low_complexity Low_complexity 1 42 0 675 267 37 0 chr5 57725999 57726186 -141903964 + MIR SINE MIR 69 262 0 182 271 21 0 chr5 57727786 57727834 -141902316 - L2 LINE L2 -6 3307 3259 321 247 90 0 chr5 57728061 57728150 -141902000 + MIR3 SINE MIR 111 207 -1 320 250 76 22 chr5 57728223 57728315 -141901835 + L1MC4 LINE L1 6614 6710 -1332 444 363 99 19 chr5 57729054 57729368 -141900782 + L2 LINE L2 2934 3272 0 2353 83 42 68 chr5 57729414 57729799 -141900351 - THE1C LTR MaLR 0 375 1 23 0 0 0 chr5 57730149 57730172 -141899978 + AT_rich Low_complexity Low_complexity 1 23 0 303 219 21 62 chr5 57730314 57730410 -141899740 - MLT1J2 LTR MaLR 0 450 359 286 298 60 20 chr5 57730448 57730599 -141899551 - MLT1J1 LTR MaLR -257 189 33 202 259 17 0 chr5 57730610 57730668 -141899482 + A-rich Low_complexity Low_complexity 3 61 0 342 45 0 0 chr5 57730822 57730866 -141899284 + (TG)n Simple_repeat Simple_repeat 1 44 0 413 248 24 16 chr5 57731334 57731459 -141898691 + MER94 DNA DNA 1 126 -8 254 333 0 0 chr5 57731536 57731608 -141898542 + L2 LINE L2 3241 3312 -1 426 306 88 105 chr5 57734659 57735146 -141895004 + L2 LINE L2 1710 2204 -1110 585 248 145 19 chr5 57735146 57735360 -141894790 - MIR SINE MIR 0 262 22 426 306 88 105 chr5 57735360 57735775 -141894375 + L2 LINE L2 2204 2806 -508 251 376 68 8 chr5 57735992 57736109 -141894041 + L2 LINE L2 3137 3260 -12 2329 111 0 0 chr5 57736236 57736543 -141893607 + AluSq SINE Alu 1 307 -6 926 250 75 29 chr5 57736800 57737108 -141893042 - MLT1J LTR MaLR -37 474 153 203 171 0 0 chr5 57737123 57737178 -141892972 + (TTG)n Simple_repeat Simple_repeat 1 55 0 1638 195 0 28 chr5 57737630 57737977 -141892173 + AluJb SINE Alu 1 312 0 207 247 41 41 chr5 57738033 57738106 -141892044 - MER5A DNA MER1_type 0 189 117 842 263 83 24 chr5 57738174 57738581 -141891569 - LTR16B LTR ERVL -1 463 3 21 0 0 0 chr5 57738709 57738730 -141891420 + AT_rich Low_complexity Low_complexity 1 21 0 1986 136 3 13 chr5 57739630 57739931 -141890219 + AluJb SINE Alu 9 306 -6 189 273 36 0 chr5 57739959 57740014 -141890136 - L2 LINE L2 0 3313 3257 787 286 27 30 chr5 57741019 57741281 -141888869 + MIR SINE MIR 2 262 0 218 309 186 22 chr5 57741297 57741663 -141888487 + L2 LINE L2 1737 2162 -1152 3052 72 12 0 chr5 57741665 57742066 -141888084 - L1P LINE L1 -5150 996 591 188 320 64 64 chr5 57742623 57742795 -141887355 + L2 LINE L2 3142 3313 0 229 357 45 18 chr5 57743194 57743306 -141886844 + L2 LINE L2 3182 3296 -17 25 51 0 0 chr5 57744251 57744290 -141885860 + AT_rich Low_complexity Low_complexity 1 39 0 220 338 45 32 chr5 57744670 57744824 -141885326 + L2 LINE L2 2940 3095 -177 552 199 96 56 chr5 57744867 57745118 -141885032 + ORSL DNA AcHobo 13 273 -2 382 113 16 0 chr5 57747295 57747357 -141882793 - MER53 DNA DNA 0 189 127 2184 65 29 7 chr5 57747842 57747964 -141882186 + AluY SINE Alu 1 119 -203 366 23 0 0 chr5 57747964 57748007 -141882143 + (CA)n Simple_repeat Simple_repeat 2 44 0 2184 65 29 7 chr5 57748007 57748200 -141881950 + AluY SINE Alu 119 322 0 183 366 14 14 chr5 57748323 57748394 -141881756 - MIR SINE MIR -107 101 31 21 0 0 0 chr5 57748634 57748655 -141881495 + AT_rich Low_complexity Low_complexity 1 21 0 199 248 101 55 chr5 57748807 57748916 -141881234 + L3 LINE CR1 540 653 -924 328 269 78 62 chr5 57749108 57749364 -141880786 + MIR SINE MIR 1 260 -2 325 169 0 112 chr5 57749442 57749531 -141880619 + MER5B DNA MER1_type 98 176 -2 5365 168 9 27 chr5 57749856 57751258 -141878892 - L1PA16 LINE L1 0 6166 4779 638 214 159 18 chr5 57751340 57751700 -141878450 + MLT1E1 LTR MaLR 6 479 -175 2173 118 0 0 chr5 57751710 57751999 -141878151 - AluSx SINE Alu -23 289 1 453 235 35 9 chr5 57752464 57752579 -141877571 - L2 LINE L2 -20 3293 3176 598 251 99 14 chr5 57752718 57752941 -141877209 - L2 LINE L2 -800 2514 2273 282 292 45 11 chr5 57752937 57753026 -141877124 + MIR3 SINE MIR 114 205 -3 * 30 0 0 0 chr5 57754165 57754195 -141875955 + AT_rich Low_complexity Low_complexity 1 30 0 229 204 0 0 chr5 57754515 57754564 -141875586 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 185 339 0 0 chr5 57755885 57755950 -141874200 + L2 LINE L2 3249 3313 0 25 51 0 0 chr5 57756046 57756085 -141874065 + AT_rich Low_complexity Low_complexity 1 39 0 1732 144 72 33 chr5 57756152 57756513 -141873637 - THE1C LTR MaLR 0 375 1 1590 173 35 11 chr5 57756986 57757270 -141872880 - AluJb SINE Alu -17 295 5 26 82 0 0 chr5 57757642 57757703 -141872447 + AT_rich Low_complexity Low_complexity 1 61 0 569 165 55 8 chr5 57759362 57759489 -141870661 - L1PA15 LINE L1 -9 6156 6024 2384 69 0 10 chr5 57759724 57760030 -141870120 + AluY SINE Alu 1 303 -8 378 0 0 0 chr5 57760330 57760372 -141869778 + (CA)n Simple_repeat Simple_repeat 2 43 0 2429 158 21 5 chr5 57760935 57761360 -141868790 - MSTB1 LTR MaLR 0 432 1 22 0 0 0 chr5 57762097 57762119 -141868031 + AT_rich Low_complexity Low_complexity 1 22 0 2630 130 61 0 chr5 57762572 57762981 -141867169 + MER57B LTR ERV1 1 434 0 28 48 0 0 chr5 57763097 57763139 -141867011 + AT_rich Low_complexity Low_complexity 1 42 0 212 237 72 93 chr5 57763899 57763996 -141866154 + MIR3 SINE MIR 89 183 -25 352 293 113 0 chr5 57764537 57764687 -141865463 - LTR67 LTR ERVL -1 556 390 1781 208 177 23 chr5 57764773 57765616 -141864534 + LTR28 LTR ERV1 1 1020 0 481 356 30 17 chr5 57765616 57765841 -141864309 - LTR67 LTR ERVL -271 286 59 256 295 71 62 chr5 57766429 57766893 -141863257 + L1MEd LINE L1 709 1176 -4943 493 316 128 22 chr5 57766895 57767309 -141862841 + L1MEd LINE L1 1211 1668 -4642 310 366 10 51 chr5 57767352 57767764 -141862386 + L1MEd LINE L1 1780 2174 -4136 249 33 0 0 chr5 57767841 57767871 -141862279 + (CA)n Simple_repeat Simple_repeat 1 30 0 187 55 73 36 chr5 57767950 57768005 -141862145 + (TATAA)n Simple_repeat Simple_repeat 4 60 0 1383 289 120 43 chr5 57768057 57770494 -141859656 + L1MEd LINE L1 2285 4907 -1222 22 35 0 0 chr5 57770505 57770534 -141859616 + AT_rich Low_complexity Low_complexity 1 29 0 748 287 111 5 chr5 57770702 57771191 -141858959 + L1MEd LINE L1 5173 5719 -428 1460 284 109 11 chr5 57771651 57772208 -141857942 + MLT2F LTR ERVL 45 656 -7 279 351 27 7 chr5 57772328 57772476 -141857674 + MIR SINE MIR 91 241 -21 2072 133 29 29 chr5 57772829 57773204 -141856946 - THE1C LTR MaLR 0 375 1 290 302 35 26 chr5 57773900 57774016 -141856134 + MIR SINE MIR 16 132 -76 376 381 82 34 chr5 57774111 57774781 -141855369 + L2 LINE L2 2081 2782 -532 26809 46 39 2 chr5 57775173 57778602 -141851548 + L1P LINE L1 13 3565 -2581 814 40 10 0 chr5 57778609 57778710 -141851440 + L1PA3 LINE L1 1566 1667 -4479 15048 31 1 0 chr5 57778710 57781296 -141848854 + L1PA3 LINE L1 3581 6171 0 584 325 55 4 chr5 57782111 57782348 -141847802 - LTR33 LTR ERVL -16 505 257 342 242 172 0 chr5 57782782 57782881 -141847269 - L2 LINE L2 -3 3310 3195 313 336 28 19 chr5 57782894 57783001 -141847149 - MIR SINE MIR -153 109 2 349 257 10 30 chr5 57783263 57783364 -141846786 - MIR SINE MIR -111 151 53 1980 65 40 22 chr5 57783415 57783735 -141846415 + AluY SINE Alu 1 325 0 836 161 0 0 chr5 57784119 57784249 -141845901 - FLAM_C SINE Alu -3 130 1 23 33 0 0 chr5 57785515 57785545 -141844605 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 57785571 57785594 -141844556 + AT_rich Low_complexity Low_complexity 1 23 0 188 200 29 0 chr5 57785654 57785689 -141844461 + MIR SINE MIR 45 80 -182 417 86 0 0 chr5 57785785 57785843 -141844307 + (CTA)n Simple_repeat Simple_repeat 2 59 0 238 204 0 0 chr5 57786710 57786764 -141843386 + A-rich Low_complexity Low_complexity 1 54 0 718 194 0 0 chr5 57786962 57787086 -141843064 - FLAM_C SINE Alu -19 124 1 1326 176 88 50 chr5 57787477 57787818 -141842332 + MLT1A1 LTR MaLR 5 358 -7 2304 99 3 0 chr5 57788032 57788344 -141841806 - AluSp SINE Alu 0 313 1 323 333 46 35 chr5 57788365 57788539 -141841611 - MIR SINE MIR -85 177 2 28 71 0 0 chr5 57788877 57788933 -141841217 + AT_rich Low_complexity Low_complexity 1 56 0 180 0 0 0 chr5 57788980 57789000 -141841150 + (TA)n Simple_repeat Simple_repeat 2 21 0 1092 186 33 9 chr5 57789507 57789717 -141840433 + MER20 DNA MER1_type 1 215 -4 2562 59 0 0 chr5 57789793 57790096 -141840054 - AluY SINE Alu -8 303 1 1353 268 115 38 chr5 57790196 57790916 -141839234 - L1ME3 LINE L1 -1 6659 5884 1805 171 0 3 chr5 57790965 57791258 -141838892 - AluJb SINE Alu -20 292 1 3799 269 104 56 chr5 57791280 57792033 -141838117 - L1ME3 LINE L1 -917 5727 5012 2224 94 0 50 chr5 57792033 57792352 -141837798 + AluSc SINE Alu 1 303 -6 3799 269 104 56 chr5 57792352 57794473 -141835677 - L1ME3 LINE L1 -1632 5012 2715 31 44 0 0 chr5 57794488 57794533 -141835617 + AT_rich Low_complexity Low_complexity 1 45 0 289 266 40 6 chr5 57794560 57794733 -141835417 + (TA)n Simple_repeat Simple_repeat 1 179 0 29 28 0 0 chr5 57794771 57794807 -141835343 + AT_rich Low_complexity Low_complexity 1 36 0 6957 50 1 34 chr5 57794808 57796046 -141834104 + L1PA5 LINE L1 4938 6145 -9 568 99 25 0 chr5 57796243 57796324 -141833826 + AluJo SINE Alu 53 135 -177 242 315 67 22 chr5 57796331 57796509 -141833641 - L1ME3 LINE L1 -4555 2270 2085 255 309 40 13 chr5 57796527 57796676 -141833474 - L1PA15-16 LINE L1 -4272 2577 2425 1323 196 37 22 chr5 57796694 57796965 -141833185 - AluJb SINE Alu -15 297 23 234 309 16 32 chr5 57797041 57797164 -141832986 - L1ME3 LINE L1 -4887 1655 1535 1055 240 148 39 chr5 57797330 57797743 -141832407 - MLT1C LTR MaLR -4 463 6 21 36 0 0 chr5 57799138 57799166 -141830984 + AT_rich Low_complexity Low_complexity 1 28 0 344 357 0 24 chr5 57799617 57799743 -141830407 + MER5B DNA MER1_type 56 178 0 239 308 30 11 chr5 57799751 57799861 -141830289 - MIR SINE MIR -67 141 30 293 233 45 68 chr5 57799933 57800066 -141830084 + MER103 DNA DNA 34 163 -3 244 290 30 60 chr5 57800536 57800636 -141829514 - L2 LINE L2 -4 3309 3213 991 218 75 4 chr5 57800831 57801138 -141829012 + MER33 DNA MER1_type 1 300 -24 186 208 28 97 chr5 57801170 57801242 -141828908 - MIR SINE MIR -40 222 156 1936 163 0 0 chr5 57802371 57802666 -141827484 - AluSx SINE Alu -17 295 1 522 259 32 86 chr5 57803171 57803355 -141826795 + L1MC4a LINE L1 5635 5797 -2011 1079 126 37 16 chr5 57803355 57803545 -141826605 - L1PA14 LINE L1 0 6161 5968 522 259 32 86 chr5 57803545 57803673 -141826477 + L1MC4a LINE L1 5797 5930 -1878 278 275 176 0 chr5 57804566 57804657 -141825493 - L2 LINE L2 -15 3257 3151 24 32 0 0 chr5 57804687 57804718 -141825432 + AT_rich Low_complexity Low_complexity 1 31 0 194 317 0 0 chr5 57805016 57805076 -141825074 - L3b LINE CR1 -196 1387 1328 503 109 0 206 chr5 57805268 57805443 -141824707 + MER53 DNA DNA 39 177 -12 421 195 0 0 chr5 57805378 57805465 -141824685 - MER53 DNA DNA -102 87 1 * 270 116 0 0 chr5 57806309 57806352 -141823798 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 215 350 39 0 chr5 57806355 57806458 -141823692 - L2 LINE L2 -15 3298 3192 1332 191 23 0 chr5 57806502 57806764 -141823386 + L1MCa LINE L1 29 296 -6130 1043 271 26 37 chr5 57806766 57807143 -141823007 - L1M4 LINE L1 -765 5381 5009 1006 240 140 37 chr5 57808440 57808761 -141821389 + MLT1E3 LTR MaLR 200 584 -40 414 53 0 0 chr5 57808860 57808917 -141821233 + (TG)n Simple_repeat Simple_repeat 2 58 0 26 0 0 0 chr5 57809229 57809255 -141820895 + AT_rich Low_complexity Low_complexity 1 26 0 226 260 0 39 chr5 57809808 57809885 -141820265 + GA-rich Low_complexity Low_complexity 4 77 0 458 134 0 12 chr5 57811334 57811416 -141818734 + (TG)n Simple_repeat Simple_repeat 2 82 0 243 250 42 73 chr5 57811502 57811598 -141818552 + MIR SINE MIR 108 200 -62 * 516 299 60 21 chr5 57811596 57811830 -141818320 + MIR SINE MIR 5 247 -15 186 333 0 0 chr5 57811878 57811932 -141818218 + L2 LINE L2 3251 3304 -9 29 70 0 0 chr5 57812676 57812733 -141817417 + AT_rich Low_complexity Low_complexity 1 57 0 21 36 0 0 chr5 57812875 57812903 -141817247 + AT_rich Low_complexity Low_complexity 1 28 0 904 232 58 4 chr5 57813456 57813697 -141816453 - MER112 DNA MER1_type -6 254 1 961 185 40 0 chr5 57814483 57814683 -141815467 + MER3 DNA MER1_type 2 209 0 211 294 39 0 chr5 57814837 57814888 -141815262 + MIR SINE MIR 210 262 0 261 200 0 0 chr5 57815017 57815072 -141815078 - MER112 DNA MER1_type -7 253 199 285 279 29 0 chr5 57815194 57815262 -141814888 + MIR3 SINE MIR 90 159 -49 1042 216 73 52 chr5 57815348 57815691 -141814459 + MLT1A1 LTR MaLR 4 353 -12 350 338 123 0 chr5 57815680 57815834 -141814316 - MER102a DNA MER1_type -38 292 120 * 195 162 0 0 chr5 57817158 57817195 -141812955 + (TA)n Simple_repeat Simple_repeat 1 37 0 2148 103 14 0 chr5 57817226 57817518 -141812632 + AluSp SINE Alu 1 296 -17 23 0 0 0 chr5 57817912 57817935 -141812215 + AT_rich Low_complexity Low_complexity 1 23 0 2220 164 21 2 chr5 57819204 57819632 -141810518 + L1MA9 LINE L1 5872 6307 -5 3670 139 51 15 chr5 57819988 57820614 -141809536 - MER51A LTR ERV1 0 640 1 328 363 48 18 chr5 57820663 57820831 -141809319 + MIR SINE MIR 1 173 -89 236 224 12 59 chr5 57821021 57821106 -141809044 + MLT1J LTR MaLR 429 509 -2 311 275 55 18 chr5 57821686 57821795 -141808355 - MLT1J2 LTR MaLR -337 113 1 198 382 48 75 chr5 57821851 57822037 -141808113 - L2 LINE L2 -88 3184 3004 492 128 0 0 chr5 57822082 57822160 -141807990 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 2197 255 77 67 chr5 57823196 57823482 -141806668 + L1MEc LINE L1 606 887 -5509 2770 7 0 0 chr5 57823482 57823780 -141806370 + AluYb8 SINE Alu 21 318 0 2197 255 77 67 chr5 57823780 57824695 -141805455 + L1MEc LINE L1 887 1820 -4576 198 167 0 0 chr5 57824973 57825009 -141805141 + GA-rich Low_complexity Low_complexity 1 36 0 344 269 115 23 chr5 57825280 57825410 -141804740 + MER5A DNA MER1_type 38 179 -10 337 271 75 27 chr5 57826891 57827025 -141803125 + MIR SINE MIR 18 153 -62 2187 299 107 40 chr5 57827043 57828432 -141801718 - L2 LINE L2 -5 3308 1823 817 287 112 71 chr5 57828432 57829975 -141800175 + L1MC4 LINE L1 5282 6973 -927 1955 288 44 28 chr5 57830079 57830783 -141799367 - L2 LINE L2 -1482 1832 1118 21 0 0 0 chr5 57830830 57830851 -141799299 + AT_rich Low_complexity Low_complexity 1 21 0 4806 204 29 8 chr5 57830913 57832104 -141798046 + L1 LINE L1 4156 5370 -776 1538 191 23 57 chr5 57832663 57833050 -141797100 - MLT1B LTR MaLR -6 384 11 2458 121 8 3 chr5 57833562 57833935 -141796215 - THE1C LTR MaLR 0 375 1 23 54 0 0 chr5 57834136 57834173 -141795977 + AT_rich Low_complexity Low_complexity 1 37 0 207 332 258 12 chr5 57834205 57834539 -141795611 + L2 LINE L2 2550 2965 -349 1231 261 18 23 chr5 57834756 57835155 -141794995 - MLT2C1 LTR ERVL 0 397 1 680 295 48 29 chr5 57835276 57835588 -141794562 + L2 LINE L2 2996 3313 0 1933 145 3 16 chr5 57836887 57837191 -141792959 + AluJo SINE Alu 12 311 -1 944 100 25 0 chr5 57837191 57837351 -141792799 + (TA)n Simple_repeat Simple_repeat 2 165 0 21 36 0 0 chr5 57837518 57837546 -141792604 + AT_rich Low_complexity Low_complexity 1 28 0 615 291 176 21 chr5 57837662 57838036 -141792114 + MLT1J1 LTR MaLR 1 432 -14 713 273 39 19 chr5 57838059 57838264 -141791886 + MIR SINE MIR 48 256 -6 498 260 24 102 chr5 57839342 57839715 -141790435 + L1MC4a LINE L1 5696 6039 -1769 1097 126 51 79 chr5 57839872 57839985 -141790165 - MER2 DNA MER2_type -134 211 104 1623 27 0 0 chr5 57839985 57840208 -141789942 - AluY SINE Alu 0 321 99 1097 126 51 79 chr5 57840208 57840307 -141789843 - MER2 DNA MER2_type -241 104 4 1745 105 0 8 chr5 57840348 57840587 -141789563 - AluSg1 SINE Alu -23 286 50 189 171 0 0 chr5 57840940 57840975 -141789175 + GA-rich Low_complexity Low_complexity 2 36 0 28 48 0 0 chr5 57842433 57842475 -141787675 + AT_rich Low_complexity Low_complexity 1 42 0 399 193 0 0 chr5 57842782 57842865 -141787285 + CT-rich Low_complexity Low_complexity 4 86 0 1264 188 48 34 chr5 57842890 57843182 -141786968 - AluJo SINE Alu -4 308 13 221 364 68 11 chr5 57843320 57843408 -141786742 - MIR3 SINE MIR -102 106 14 * 764 278 16 5 chr5 57843401 57843592 -141786558 + MIR SINE MIR 70 262 0 2026 121 7 0 chr5 57843653 57843977 -141786173 + AluSx SINE Alu 1 326 0 219 312 101 28 chr5 57844448 57844557 -141785593 + L2 LINE L2 3148 3264 -8 226 240 0 20 chr5 57844674 57844724 -141785426 - MIR SINE MIR -102 160 112 1919 128 0 0 chr5 57846235 57846501 -141783649 + AluSg SINE Alu 1 266 -44 184 29 29 29 chr5 57846560 57846594 -141783556 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 2551 54 0 0 chr5 57848821 57849118 -141781032 + AluY SINE Alu 1 297 -14 23 0 0 0 chr5 57849125 57849148 -141781002 + AT_rich Low_complexity Low_complexity 1 23 0 359 337 71 18 chr5 57849397 57849723 -141780427 + HsTC2 DNA Tc2 505 847 -1051 21 0 0 0 chr5 57850134 57850155 -141779995 + AT_rich Low_complexity Low_complexity 1 21 0 710 204 56 37 chr5 57852960 57853122 -141777028 - MER20 DNA MER1_type -1 218 54 2276 105 22 33 chr5 57854354 57854717 -141775433 - THE1B LTR MaLR 0 364 6 197 309 62 21 chr5 57854723 57854820 -141775330 - L2 LINE L2 -228 3044 2944 295 375 30 25 chr5 57854951 57855186 -141774964 - L2 LINE L2 -557 2757 2522 403 293 0 0 chr5 57855776 57855875 -141774275 + MIR SINE MIR 7 105 -157 22 0 0 0 chr5 57855875 57855897 -141774253 + AT_rich Low_complexity Low_complexity 1 22 0 1562 179 28 6 chr5 57855905 57856257 -141773893 - L1MA5 LINE L1 -5 6295 5936 1146 192 55 4 chr5 57856257 57856528 -141773622 + L1 LINE L1 4940 5224 -922 699 236 11 34 chr5 57856528 57856706 -141773444 + MIR SINE MIR 89 262 0 4323 118 3 0 chr5 57856741 57857374 -141772776 + MER41B LTR ERV1 1 635 0 34168 45 3 2 chr5 57858691 57863592 -141766558 - L1PA4 LINE L1 -3 6152 1241 2114 57 53 11 chr5 57863592 57863874 -141766276 - AluY SINE Alu -17 294 1 34168 45 3 2 chr5 57863874 57865109 -141765041 - L1PA4 LINE L1 -4914 1241 8 2550 53 0 0 chr5 57865305 57865607 -141764543 - AluY SINE Alu -9 302 1 508 315 119 46 chr5 57865808 57866110 -141764040 - L3 LINE CR1 -4 1573 1250 787 146 98 12 chr5 57866224 57866388 -141763762 + MER41B-int LTR ERV1 1585 1762 -4184 968 132 7 6 chr5 57866389 57866657 -141763493 + MER41B-int LTR ERV1 1988 2319 -3627 * 1718 89 31 12 chr5 57866654 57866911 -141763239 + MER41B-int LTR ERV1 2587 2848 -3098 * 11668 113 20 10 chr5 57866903 57869300 -141760850 + MER41B-int LTR ERV1 2738 5946 0 3551 108 108 0 chr5 57869300 57869873 -141760277 + MER41B LTR ERV1 1 635 0 267 339 9 17 chr5 57870788 57870903 -141759247 - MIR SINE MIR -148 114 1 202 232 18 0 chr5 57871244 57871300 -141758850 + A-rich Low_complexity Low_complexity 3 59 0 547 273 62 70 chr5 57871359 57871715 -141758435 - MLT1J LTR MaLR -55 456 104 637 260 105 64 chr5 57871810 57871991 -141758159 + L1M4 LINE L1 4204 4376 -1770 1501 190 3 33 chr5 57871991 57872291 -141757859 - AluJb SINE Alu -21 291 1 637 260 105 64 chr5 57872291 57872482 -141757668 + L1M4 LINE L1 4376 4591 -1555 1389 117 0 0 chr5 57873215 57873394 -141756756 + AluSx SINE Alu 1 179 -133 271 255 208 7 chr5 57874503 57874652 -141755498 - MIR SINE MIR -3 259 81 545 289 10 29 chr5 57874702 57874906 -141755244 + MLT1H LTR MaLR 35 234 -315 182 243 0 27 chr5 57875188 57875225 -141754925 - MIR SINE MIR -207 55 20 189 107 0 0 chr5 57877322 57877350 -141752800 + (GAA)n Simple_repeat Simple_repeat 3 30 0 3608 156 102 0 chr5 57877418 57878073 -141752077 - MER72 LTR ERV1 0 722 1 272 364 14 0 chr5 57878698 57878838 -141751312 + HAL1b LINE L1 432 573 -775 298 264 123 0 chr5 57880178 57880284 -141749866 - MIR SINE MIR -133 129 11 271 301 84 28 chr5 57880846 57880989 -141749161 + L2 LINE L2 2590 2740 -574 446 282 146 82 chr5 57881034 57881314 -141748836 + L2 LINE L2 2965 3262 -10 816 139 0 0 chr5 57882164 57882279 -141747871 + FLAM_C SINE Alu 13 127 -16 188 235 0 39 chr5 57882620 57882671 -141747479 - L2 LINE L2 0 3313 3265 218 330 25 42 chr5 57882718 57882836 -141747314 - MIR SINE MIR -75 133 18 225 300 43 0 chr5 57883378 57883448 -141746702 + LTR58 LTR ERV1 38 110 -569 237 376 74 26 chr5 57888505 57888694 -141741456 - MIR3 SINE MIR 0 208 11 386 293 111 58 chr5 57888954 57889179 -141740971 + MIR SINE MIR 20 256 -6 4135 109 7 2 chr5 57889944 57890538 -141739612 + MER4A LTR ERV1 1 597 -3 192 289 219 26 chr5 57890789 57890903 -141739247 + MIR SINE MIR 90 225 -37 * 465 319 58 0 chr5 57890892 57891030 -141739120 + MER91A DNA MER1_type 7 152 -44 617 295 55 50 chr5 57892702 57893106 -141737044 - MLT1J LTR MaLR 0 511 106 1923 178 0 0 chr5 57893583 57893887 -141736263 - AluJb SINE Alu -2 310 7 488 218 36 73 chr5 57893899 57894064 -141736086 + MER58A DNA MER1_type 45 203 -21 441 272 100 28 chr5 57894633 57894813 -141735337 + MIR SINE MIR 3 195 -67 565 244 30 105 chr5 57895380 57895712 -141734438 - MER46C DNA MER2_type -31 307 1 272 274 20 69 chr5 57896712 57896814 -141733336 - MER91A DNA MER1_type -97 99 3 800 245 82 84 chr5 57897036 57897521 -141732629 + LTR33 LTR ERVL 20 503 -18 213 342 58 58 chr5 57897791 57897911 -141732239 - L2 LINE L2 -19 3253 3134 451 299 7 7 chr5 57897934 57898071 -141732079 - MIR SINE MIR -13 249 113 506 318 41 23 chr5 57898842 57899062 -141731088 + MIR SINE MIR 2 225 -37 29 28 0 0 chr5 57900123 57900159 -141729991 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 57900176 57900197 -141729953 + AT_rich Low_complexity Low_complexity 1 21 0 553 294 86 43 chr5 57900278 57900557 -141729593 + MLT1J2 LTR MaLR 22 312 -138 326 289 167 13 chr5 57900593 57900681 -141729469 - L2 LINE L2 -540 2774 2701 1659 255 99 26 chr5 57900681 57901186 -141728964 + MLT1F LTR MaLR 1 542 0 326 289 167 13 chr5 57901186 57901253 -141728897 - L2 LINE L2 -613 2701 2595 312 349 98 38 chr5 57901307 57901571 -141728579 + L3 LINE CR1 878 1157 -420 710 308 122 49 chr5 57901658 57902165 -141727985 - L2 LINE L2 -843 2471 1928 196 333 28 0 chr5 57903396 57903468 -141726682 - MIR SINE MIR -70 192 119 298 275 37 18 chr5 57905203 57905312 -141724838 + MLT2E LTR ERVL 32 142 -486 613 258 99 6 chr5 57905731 57905913 -141724237 - MIR SINE MIR -8 254 56 627 173 49 98 chr5 57906016 57906241 -141723909 - L1MD2 LINE L1 0 6359 6146 557 298 126 64 chr5 57906265 57906671 -141723479 + L3 LINE CR1 821 1251 -326 788 222 22 5 chr5 57906850 57907035 -141723115 + MER5A DNA MER1_type 2 189 0 502 265 71 29 chr5 57907590 57907760 -141722390 - MER5A DNA MER1_type 0 189 13 2427 81 0 0 chr5 57907809 57908117 -141722033 + AluY SINE Alu 1 308 -3 192 269 30 15 chr5 57908353 57908420 -141721730 - L2 LINE L2 -42 3271 3204 238 228 119 0 chr5 57908805 57908906 -141721244 + L1ME4a LINE L1 6009 6121 0 494 305 59 27 chr5 57909055 57909242 -141720908 + MIR SINE MIR 66 258 -4 294 329 206 4 chr5 57909277 57909520 -141720630 - L3 LINE CR1 -87 1490 1199 421 343 43 14 chr5 57909551 57909761 -141720389 - MIR SINE MIR -34 228 13 609 220 161 14 chr5 57909863 57910081 -141720069 - LTR33A LTR ERVL -2 521 272 418 284 30 30 chr5 57910107 57910304 -141719846 - LTR33A LTR ERVL -319 204 8 467 316 142 22 chr5 57910326 57910643 -141719507 - L3 LINE CR1 -606 971 617 784 187 24 0 chr5 57910644 57910810 -141719340 + MER96B DNA MER1_type? 10 179 -238 604 298 101 0 chr5 57911073 57911331 -141718819 - MER69 DNA AcHobo -2195 331 48 315 281 97 54 chr5 57914154 57914339 -141715811 - MIR SINE MIR -53 209 17 468 264 115 20 chr5 57914765 57914913 -141715237 - MSTD LTR MaLR -221 175 14 840 191 62 136 chr5 57915126 57915503 -141714647 + MLT1A1 LTR MaLR 5 421 -11 15342 132 19 16 chr5 57915511 57917299 -141712851 - Tigger1 DNA MER2_type -2 2416 618 1995 146 3 3 chr5 57917299 57917600 -141712550 - AluJb SINE Alu -11 301 1 15342 132 19 16 chr5 57917600 57918195 -141711955 - Tigger1 DNA MER2_type -1800 618 26 213 94 0 0 chr5 57918196 57918228 -141711922 + (TG)n Simple_repeat Simple_repeat 2 33 0 279 0 0 0 chr5 57918561 57918592 -141711558 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 343 210 116 75 chr5 57919292 57919460 -141710690 - MIR SINE MIR -68 140 16 387 0 0 0 chr5 57920820 57920863 -141709287 + (CA)n Simple_repeat Simple_repeat 2 44 0 32 43 0 0 chr5 57921499 57921545 -141708605 + AT_rich Low_complexity Low_complexity 1 46 0 1257 201 74 56 chr5 57922812 57923096 -141707054 - AluJo SINE Alu -13 289 1 251 114 0 0 chr5 57923528 57923563 -141706587 + U2 snRNA snRNA 1 35 -153 1016 183 85 66 chr5 57923979 57924340 -141705810 + MSTC LTR MaLR 1 428 0 440 176 53 38 chr5 57924563 57924694 -141705456 - MER103 DNA DNA -14 152 20 1854 154 17 0 chr5 57924890 57925188 -141704962 + AluSx SINE Alu 1 303 -9 24 32 0 0 chr5 57925385 57925416 -141704734 + AT_rich Low_complexity Low_complexity 1 31 0 247 224 15 0 chr5 57925466 57925533 -141704617 - MER116 DNA Mariner -12 68 1 23 54 0 0 chr5 57925548 57925585 -141704565 + AT_rich Low_complexity Low_complexity 1 37 0 1327 173 60 8 chr5 57926556 57926805 -141703345 - LTR1 LTR ERV1 -1 784 523 1991 100 194 168 chr5 57926805 57927373 -141702777 - LTR12 LTR ERV1 -133 2032 58 245 231 0 0 chr5 57927373 57927425 -141702725 - LTR30 LTR ERV1 -670 52 1 2347 127 45 101 chr5 57927425 57927931 -141702219 - LTR1 LTR ERV1 -259 526 49 496 322 67 0 chr5 57928215 57928423 -141701727 - MER102b DNA MER1_type -49 292 71 1921 200 48 12 chr5 57929489 57929904 -141700246 - MER63B DNA MER1_type -3 433 4 1765 178 21 0 chr5 57930236 57930522 -141699628 - AluJb SINE Alu -20 292 1 757 293 79 58 chr5 57931419 57931798 -141698352 + LTR33A LTR ERVL 13 399 -124 346 336 30 23 chr5 57932065 57932196 -141697954 - MIR SINE MIR -100 162 31 840 165 0 15 chr5 57932358 57932491 -141697659 - FRAM SINE Alu -19 157 27 236 309 141 53 chr5 57932763 57933103 -141697047 + L2 LINE L2 2177 2546 -768 438 298 44 105 chr5 57933488 57933851 -141696299 + L2 LINE L2 2915 3255 -17 532 253 117 6 chr5 57936062 57936224 -141693926 - MER5A DNA MER1_type -7 182 3 23 0 0 0 chr5 57940108 57940131 -141690019 + AT_rich Low_complexity Low_complexity 1 23 0 1939 163 133 72 chr5 57942304 57942821 -141687329 - MER34C LTR ERV1 0 585 37 187 77 0 0 chr5 57942821 57942847 -141687303 - MIR SINE MIR -110 152 127 207 162 0 0 chr5 57943499 57943536 -141686614 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 843 254 121 19 chr5 57944261 57944568 -141685582 + L1MC4a LINE L1 5352 5689 -2119 7416 59 10 0 chr5 57944656 57945656 -141684494 + L1PA7 LINE L1 5140 6148 -6 978 85 23 0 chr5 57945665 57945795 -141684355 + L1PB1 LINE L1 6018 6150 -1 937 143 40 46 chr5 57945795 57945961 -141684189 + MER58B DNA MER1_type 174 340 -1 748 244 22 11 chr5 57945962 57946142 -141684008 + L1MC4a LINE L1 5683 5864 -1944 1748 114 92 0 chr5 57946142 57946304 -141683846 + AluSq SINE Alu 1 197 -116 1011 87 0 93 chr5 57946304 57946476 -141683674 + L1PA6 LINE L1 5999 6154 0 1748 114 92 0 chr5 57946476 57946575 -141683575 + AluSq SINE Alu 197 286 -27 225 0 0 0 chr5 57946575 57946600 -141683550 + (CA)n Simple_repeat Simple_repeat 2 26 0 305 230 69 86 chr5 57946601 57946775 -141683375 + L1MC4a LINE L1 5853 6023 -1785 415 245 63 35 chr5 57947019 57947162 -141682988 + L2 LINE L2 3159 3305 -8 640 246 46 34 chr5 57947214 57947297 -141682853 + MIR SINE MIR 86 167 -95 2048 189 22 6 chr5 57947297 57947656 -141682494 + MLT1A1 LTR MaLR 1 365 0 640 246 46 34 chr5 57947656 57947747 -141682403 + MIR SINE MIR 167 262 0 2941 112 138 108 chr5 57948219 57948864 -141681286 + MER4A LTR ERV1 1 664 0 568 267 110 89 chr5 57949213 57950095 -141680055 - L1MC4 LINE L1 -155 7887 7000 6741 133 10 30 chr5 57950277 57951558 -141678592 - L1MA2 LINE L1 0 6304 5065 2285 119 0 3 chr5 57951558 57951869 -141678281 - AluSg SINE Alu 0 310 1 6741 133 10 30 chr5 57951869 57952203 -141677947 - L1MA2 LINE L1 -1239 5065 4726 246 283 214 51 chr5 57952304 57952715 -141677435 - L1MC4a LINE L1 -1348 6460 5973 234 0 0 0 chr5 57952715 57952741 -141677409 + (TTG)n Simple_repeat Simple_repeat 2 27 0 246 283 214 51 chr5 57952741 57952764 -141677386 - L1MC4a LINE L1 -1835 5973 5955 1387 180 35 119 chr5 57952972 57953047 -141677103 - MLT1A1 LTR MaLR 0 365 285 2357 87 0 13 chr5 57953047 57953357 -141676793 + AluY SINE Alu 1 306 -5 1387 180 35 119 chr5 57953357 57953675 -141676475 - MLT1A1 LTR MaLR -80 285 5 1858 160 7 4 chr5 57953865 57954169 -141675981 - AluSx SINE Alu 0 306 2 1975 116 50 23 chr5 57954293 57954595 -141675555 + AluSg SINE Alu 1 310 0 609 241 109 45 chr5 57954605 57954825 -141675325 + Charlie2b DNA MER1_type 8 241 -2621 231 167 0 0 chr5 57954825 57954867 -141675283 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 236 275 62 38 chr5 57954957 57955037 -141675113 + Charlie2b DNA MER1_type 602 683 -2099 519 175 219 19 chr5 57955128 57955288 -141674862 + Charlie2a DNA MER1_type 1472 1663 -1199 2958 89 0 0 chr5 57955326 57955686 -141674464 - THE1B LTR MaLR 0 364 5 10260 111 56 40 chr5 57955690 57957245 -141672905 - THE1B-int LTR MaLR 0 1580 1 2687 118 20 0 chr5 57957245 57957602 -141672548 - THE1B LTR MaLR 0 364 1 386 186 35 23 chr5 57957602 57957688 -141672462 + Charlie2 DNA MER1_type 2747 2833 -29 23 0 0 0 chr5 57958449 57958472 -141671678 + AT_rich Low_complexity Low_complexity 1 23 0 2685 181 22 22 chr5 57959010 57959545 -141670605 - MER67A LTR ERV1 -8 535 1 458 237 251 38 chr5 57959878 57960165 -141669985 + MLT1K LTR MaLR 121 468 -120 252 250 58 39 chr5 57960271 57960375 -141669775 + MLT1K LTR MaLR 468 573 -15 2040 129 0 10 chr5 57960539 57960833 -141669317 - AluSq SINE Alu -22 291 1 207 302 42 0 chr5 57961476 57961572 -141668578 + (TATATG)n Simple_repeat Simple_repeat 5 104 0 332 262 82 71 chr5 57961630 57961912 -141668238 - L2 LINE L2 -1 3312 3028 633 316 66 17 chr5 57963946 57964411 -141665739 - L2 LINE L2 -235 3078 2594 755 286 42 21 chr5 57964914 57965152 -141664998 + MIR SINE MIR 18 260 -2 453 116 0 0 chr5 57965186 57965255 -141664895 + (TTCC)n Simple_repeat Simple_repeat 1 69 0 2246 87 3 7 chr5 57965255 57965554 -141664596 - AluSq SINE Alu -13 300 3 557 333 0 0 chr5 57965744 57965888 -141664262 - MER5B DNA MER1_type -34 144 1 268 256 39 0 chr5 57965900 57965981 -141664169 - MIR SINE MIR -65 143 55 2062 141 0 0 chr5 57966715 57967012 -141663138 + AluJb SINE Alu 1 297 -15 1542 228 96 37 chr5 57968039 57968552 -141661598 - L1ME3 LINE L1 0 6162 5620 302 173 0 0 chr5 57969048 57969100 -141661050 + MER5B DNA MER1_type 1 52 -126 318 311 42 25 chr5 57969252 57969371 -141660779 + MER5A DNA MER1_type 63 183 -6 2092 119 7 0 chr5 57969574 57969867 -141660283 - AluSp SINE Alu -18 295 1 208 258 0 97 chr5 57970642 57970735 -141659415 - MIR SINE MIR -82 180 97 295 267 81 113 chr5 57971033 57971254 -141658896 + L2 LINE L2 3043 3256 -16 418 232 216 32 chr5 57971538 57971728 -141658422 + MIR SINE MIR 8 232 -30 342 165 200 0 chr5 57971795 57971880 -141658270 + MER103 DNA DNA 63 164 -2 180 0 0 0 chr5 57972073 57972093 -141658057 + (TAA)n Simple_repeat Simple_repeat 2 21 0 21 36 0 0 chr5 57972118 57972146 -141658004 + AT_rich Low_complexity Low_complexity 1 28 0 203 324 102 19 chr5 57973789 57973897 -141656253 - L2 LINE L2 -1 3271 3155 451 280 80 7 chr5 57973987 57974137 -141656013 + MIR SINE MIR 56 216 -46 278 312 54 0 chr5 57974542 57974635 -141655515 - L2 LINE L2 -5 3308 3211 1474 165 10 7 chr5 57976011 57976419 -141653731 + L1PA13 LINE L1 5695 6156 -7 273 332 50 78 chr5 57976642 57976925 -141653225 + L2 LINE L2 2590 2864 -450 223 277 63 132 chr5 57977313 57977472 -141652678 - L2 LINE L2 0 3272 3125 586 258 234 27 chr5 57977481 57978097 -141652053 + LTR50 LTR ERVL 3 795 0 558 320 114 29 chr5 57978102 57978812 -141651338 - L2 LINE L2 -169 3144 2371 587 292 44 32 chr5 57978816 57979109 -141651041 - MLT1L LTR MaLR -3 611 233 712 255 6 96 chr5 57979301 57979634 -141650516 - L2 LINE L2 -958 2356 2054 1198 214 134 27 chr5 57980111 57980560 -141649590 - LTR54B LTR ERV1 -1 497 1 206 336 10 29 chr5 57980752 57980856 -141649294 + CT-rich Low_complexity Low_complexity 3 104 0 920 196 31 82 chr5 57981449 57981884 -141648266 + MLT1A2 LTR MaLR 1 367 -7 24 0 0 0 chr5 57982365 57982389 -141647761 + AT_rich Low_complexity Low_complexity 1 24 0 2374 238 41 10 chr5 57982457 57983115 -141647035 - Tigger7 DNA MER2_type -2 2585 1 395 337 80 62 chr5 57983686 57984122 -141646028 - L2 LINE L2 -1 3271 2828 418 357 30 10 chr5 57985045 57985244 -141644906 - MIR SINE MIR -20 242 40 559 331 6 0 chr5 57985314 57985471 -141644679 - MIR3 SINE MIR -10 198 41 755 149 92 14 chr5 57985472 57985613 -141644537 + L1P5 LINE L1 5516 5667 -489 718 167 0 8 chr5 57986788 57986920 -141643230 + AluJo/FLAM SINE Alu 1 131 -181 1729 190 0 19 chr5 57986922 57987238 -141642912 + AluJo SINE Alu 1 310 -2 336 261 116 35 chr5 57987710 57987909 -141642241 - L2 LINE L2 0 3313 3099 465 329 49 0 chr5 57988291 57988455 -141641695 + MIR SINE MIR 47 218 -44 21 82 0 0 chr5 57989060 57989109 -141641041 + AT_rich Low_complexity Low_complexity 1 49 0 5777 130 5 3 chr5 57989800 57990745 -141639405 + L1PB3 LINE L1 5203 6148 -6 830 93 17 0 chr5 57991869 57991987 -141638163 - AluSg/x SINE Alu -14 298 179 307 306 102 45 chr5 57992237 57992570 -141637580 - LTR33A LTR ERVL -40 483 132 21 36 0 0 chr5 57993396 57993424 -141636726 + AT_rich Low_complexity Low_complexity 1 28 0 2661 95 0 6 chr5 57993721 57994078 -141636072 + THE1A LTR MaLR 1 355 0 238 309 25 12 chr5 57994149 57994230 -141635920 + L2 LINE L2 2932 3013 -300 23 33 0 0 chr5 57994343 57994373 -141635777 + AT_rich Low_complexity Low_complexity 1 30 0 3998 76 63 3 chr5 57994375 57995335 -141634815 + MER11A LTR ERVK 3 1266 0 25 0 0 0 chr5 57995722 57995747 -141634403 + AT_rich Low_complexity Low_complexity 1 25 0 11537 225 29 31 chr5 57995760 57999622 -141630528 + L1PA11 LINE L1 10 4955 -2629 11549 139 32 1 chr5 57999653 58002356 -141627794 + L1PA11 LINE L1 4881 7610 -2 24 0 0 0 chr5 58002359 58002383 -141627767 + AT_rich Low_complexity Low_complexity 1 24 0 186 43 0 0 chr5 58002430 58002453 -141627697 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1035 171 6 0 chr5 58002453 58002628 -141627522 - L1PA15 LINE L1 -13 6152 5977 32 75 0 0 chr5 58002693 58002760 -141627390 + AT_rich Low_complexity Low_complexity 1 67 0 216 0 0 0 chr5 58002854 58002878 -141627272 + (CA)n Simple_repeat Simple_repeat 2 25 0 239 216 39 0 chr5 58004246 58004297 -141625853 + (TATG)n Simple_repeat Simple_repeat 4 56 0 350 320 21 0 chr5 58004593 58004690 -141625460 + MER45 DNA AcHobo 12 110 -68 987 160 0 29 chr5 58004692 58004867 -141625283 - FRAM SINE Alu -10 166 1 370 222 0 14 chr5 58004867 58004939 -141625211 + MER45 DNA AcHobo 1511 1581 0 302 328 69 0 chr5 58005136 58005252 -141624898 + MER5B DNA MER1_type 16 139 -39 730 137 53 0 chr5 58006205 58006336 -141623814 + L1MD3 LINE L1 6907 7044 -951 896 208 15 25 chr5 58006630 58006832 -141623318 + AluJo SINE Alu 87 286 -26 539 223 38 24 chr5 58007000 58007229 -141622921 + L1M4 LINE L1 5199 5429 -737 295 345 63 6 chr5 58007651 58007825 -141622325 - HAL1b LINE L1 -773 575 392 3820 154 92 0 chr5 58008428 58009089 -141621061 + MER72 LTR ERV1 1 722 0 189 107 0 0 chr5 58009157 58009185 -141620965 + (TTC)n Simple_repeat Simple_repeat 3 30 0 181 243 0 27 chr5 58011282 58011319 -141618831 + MIR SINE MIR 20 55 -207 587 311 9 27 chr5 58011586 58011805 -141618345 - MLT1H LTR MaLR -300 249 35 274 255 208 7 chr5 58011855 58012004 -141618146 + MIR SINE MIR 81 259 -3 1374 117 0 0 chr5 58013113 58013292 -141616858 - AluSx SINE Alu -133 179 1 275 246 101 72 chr5 58014020 58014211 -141615939 - L1M4 LINE L1 -1555 4591 4384 1503 183 3 33 chr5 58014211 58014511 -141615639 + AluJb SINE Alu 1 291 -21 275 246 101 72 chr5 58014511 58014664 -141615486 - L1M4 LINE L1 -1762 4384 4237 640 278 62 70 chr5 58014787 58015143 -141615007 + MLT1J LTR MaLR 104 456 -55 225 0 0 0 chr5 58015224 58015249 -141614901 + (T)n Simple_repeat Simple_repeat 1 25 0 229 79 0 0 chr5 58015249 58015287 -141614863 - L1M1 LINE L1 -499 5804 5767 13704 29 5 2 chr5 58015298 58017670 -141612480 - L1HS LINE L1 0 6155 3777 44153 31 23 1 chr5 58017770 58023291 -141606859 - L1P1 LINE L1 -508 5647 1 243 319 17 35 chr5 58023669 58023785 -141606365 + MIR SINE MIR 1 114 -148 3490 107 132 0 chr5 58024698 58025259 -141604891 - MER41B LTR ERV1 0 635 1 841 92 0 0 chr5 58025259 58025368 -141604782 - MER41B-int LTR ERV1 0 5946 5838 2859 137 29 11 chr5 58025468 58025944 -141604206 - HSMAR2 DNA Mariner -76 1226 742 3093 137 2 32 chr5 58026002 58026506 -141603644 - HSMAR2 DNA Mariner -813 489 1 207 0 0 0 chr5 58026739 58026762 -141603388 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 487 235 10 10 chr5 58027255 58027353 -141602797 + MER81 DNA DNA 9 106 -8 360 323 65 40 chr5 58028358 58028559 -141601591 - MIR SINE MIR -50 212 7 855 189 14 0 chr5 58028593 58028741 -141601409 - AluJb SINE Alu -13 299 150 306 279 11 21 chr5 58028750 58028933 -141601217 + GA-rich Low_complexity Low_complexity 1 272 0 273 271 12 41 chr5 58029010 58029180 -141600970 + GA-rich Low_complexity Low_complexity 3 167 0 364 152 0 51 chr5 58029370 58029449 -141600701 - HsTC2 DNA Tc2 -1 1897 1823 35015 43 33 16 chr5 58029452 58034139 -141596011 + L1P LINE L1 1 4766 -1380 6111 114 37 34 chr5 58034457 58037169 -141592981 + SVA Other Other 5 1385 -1 320 280 37 19 chr5 58037171 58037278 -141592872 - MIR SINE MIR -106 156 48 393 220 0 106 chr5 58038483 58038624 -141591526 + MIR SINE MIR 79 204 -58 900 364 92 39 chr5 58038861 58039911 -141590239 + L2 LINE L2 2116 3221 -51 1293 244 33 67 chr5 58039911 58040391 -141589759 - MLT2C2 LTR ERVL 0 464 1 900 364 92 39 chr5 58040391 58040441 -141589709 + L2 LINE L2 3221 3267 -5 975 185 19 12 chr5 58040658 58040820 -141589330 + FRAM SINE Alu 1 163 -3 22 0 0 0 chr5 58041807 58041829 -141588321 + AT_rich Low_complexity Low_complexity 1 22 0 366 340 37 31 chr5 58042145 58042307 -141587843 + MIR SINE MIR 13 175 -87 230 183 86 118 chr5 58042427 58042520 -141587630 + L2 LINE L2 3107 3196 -76 373 180 9 99 chr5 58042669 58042780 -141587370 + L1MC5 LINE L1 7813 7913 -48 245 243 43 0 chr5 58042784 58042854 -141587296 + (TATATG)n Simple_repeat Simple_repeat 4 76 0 251 259 0 0 chr5 58044283 58044337 -141585813 + L2 LINE L2 3219 3272 0 279 250 57 80 chr5 58044621 58044797 -141585353 - HAL1 LINE L1 -7 2500 2329 619 74 0 12 chr5 58044909 58044990 -141585160 + MADE1 DNA Mariner 1 80 0 1738 129 8 82 chr5 58045094 58045467 -141584683 - MER4A LTR ERV1 0 664 261 704 91 0 10 chr5 58045467 58045566 -141584584 - MER4A LTR ERV1 -566 98 1 2185 174 64 15 chr5 58045702 58045776 -141584374 + MSTA LTR MaLR 1 70 -358 2277 125 61 19 chr5 58045776 58046136 -141584014 - THE1C LTR MaLR 0 375 1 2185 174 64 15 chr5 58046136 58046469 -141583681 + MSTA LTR MaLR 70 428 0 5017 208 3 8 chr5 58046469 58047403 -141582747 + MSTA-int LTR MaLR 1 930 -721 695 263 112 76 chr5 58047640 58048156 -141581994 - HAL1 LINE L1 -604 1903 1352 1757 153 55 71 chr5 58048156 58048536 -141581614 + THE1C LTR MaLR 2 375 0 695 263 112 76 chr5 58048536 58048733 -141581417 - HAL1 LINE L1 -1155 1352 1164 664 294 63 0 chr5 58048734 58048972 -141581178 + MIR SINE MIR 9 261 -1 519 226 231 11 chr5 58048985 58049171 -141580979 + MIR SINE MIR 1 227 -35 420 291 70 25 chr5 58049188 58049504 -141580646 - HAL1 LINE L1 -1362 1145 816 315 279 30 79 chr5 58049969 58050134 -141580016 - HAL1 LINE L1 -2341 166 10 200 277 64 0 chr5 58050663 58050710 -141579440 - L2 LINE L2 -63 3209 3160 1154 217 51 0 chr5 58050754 58050989 -141579161 - MLT1C LTR MaLR 0 467 221 210 162 0 0 chr5 58050989 58051026 -141579124 + T-rich Low_complexity Low_complexity 1 37 0 27043 38 6 1 chr5 58051026 58055056 -141575094 - L1PA3 LINE L1 0 6155 2106 38938 48 5 2 chr5 58055198 58059949 -141570201 - L1P LINE L1 -1378 4768 3 1074 161 0 0 chr5 58061449 58061610 -141568540 + AluJb SINE Alu 137 297 -15 234 143 0 0 chr5 58063071 58063120 -141567030 + (CA)n Simple_repeat Simple_repeat 2 50 0 406 55 0 0 chr5 58063544 58063599 -141566551 + L1MB4 LINE L1 6123 6177 -3 237 241 138 43 chr5 58063639 58063755 -141566395 - MER5B DNA MER1_type -51 127 1 2188 96 3 17 chr5 58064771 58065113 -141565037 + AluSp SINE Alu 1 313 0 848 234 23 19 chr5 58066242 58066456 -141563694 - MIR SINE MIR -3 259 45 900 186 141 31 chr5 58066705 58067045 -141563105 + L1ME1 LINE L1 5757 6164 -2 2325 74 3 0 chr5 58067091 58067390 -141562760 + AluY SINE Alu 1 300 -11 940 198 6 0 chr5 58067530 58067687 -141562463 + FRAM SINE Alu 3 160 -6 2553 188 81 63 chr5 58067736 58068714 -141561436 + L1MC4 LINE L1 6996 8034 -8 285 368 19 9 chr5 58068721 58068827 -141561323 - MIR SINE MIR -136 126 20 624 247 134 17 chr5 58069249 58069480 -141560670 - MIR SINE MIR 0 262 5 302 202 17 92 chr5 58069788 58069907 -141560243 + MER104 DNA Tc2 5 114 -66 1991 99 14 89 chr5 58069927 58070423 -141559727 - L1PA2 LINE L1 -2 6153 5695 1832 169 50 14 chr5 58170430 58170792 -141459358 + THE1C LTR MaLR 1 375 0 219 88 0 0 chr5 58170931 58170965 -141459185 + (T)n Simple_repeat Simple_repeat 1 34 0 398 280 209 0 chr5 58171279 58171490 -141458660 - HAL1b LINE L1 -613 735 481 201 74 0 0 chr5 58171498 58171525 -141458625 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 10268 39 6 1 chr5 58171874 58173154 -141456996 - L1P LINE L1 -1541 4605 3319 5583 145 18 9 chr5 58173277 58174599 -141455551 + L1MA8 LINE L1 4842 6177 -114 6365 142 14 16 chr5 58174735 58176051 -141454099 + L1MA2 LINE L1 4986 6304 0 7502 178 37 21 chr5 58176066 58177823 -141452327 + L1 LINE L1 2915 4699 -1447 318 50 0 0 chr5 58178053 58178093 -141452057 + (GA)n Simple_repeat Simple_repeat 2 41 0 2322 93 0 3 chr5 58180013 58180313 -141449837 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr5 58180947 58180968 -141449182 + AT_rich Low_complexity Low_complexity 1 21 0 347 333 59 38 chr5 58181268 58181573 -141448577 + L1MEd LINE L1 1021 1312 -1195 273 326 31 0 chr5 58181620 58181749 -141448401 + HAL1b LINE L1 441 573 -775 21 0 0 0 chr5 58182381 58182402 -141447748 + AT_rich Low_complexity Low_complexity 1 21 0 305 98 0 20 chr5 58182509 58182560 -141447590 + (TGG)n Simple_repeat Simple_repeat 1 50 0 2213 118 0 13 chr5 58182644 58182780 -141447370 + AluSx SINE Alu 1 137 -175 2606 50 0 0 chr5 58182780 58183082 -141447068 + AluY SINE Alu 1 302 -9 2213 118 0 13 chr5 58183082 58183249 -141446901 + AluSx SINE Alu 137 300 -12 800 169 27 27 chr5 58183304 58183452 -141446698 + FRAM SINE Alu 22 169 -7 509 162 22 123 chr5 58183474 58183653 -141446497 - L1MA9 LINE L1 -4 6308 6148 444 171 0 0 chr5 58184055 58184137 -141446013 + (TA)n Simple_repeat Simple_repeat 2 83 0 5258 121 180 9 chr5 58184199 58185316 -141444834 + L1PBa LINE L1 2 1733 -5130 522 221 6 103 chr5 58185372 58185711 -141444439 + L1 LINE L1 2905 3210 -2936 985 193 11 6 chr5 58185899 58186080 -141444070 - AluSc SINE Alu -23 286 105 1798 197 57 38 chr5 58186080 58186618 -141443532 + MLT2A2 LTR ERVL 2 551 -3 706 125 9 0 chr5 58186620 58186732 -141443418 - AluSq/x SINE Alu -200 113 1 1936 145 25 0 chr5 58186874 58187189 -141442961 - AluSx SINE Alu 0 322 1 1899 232 32 76 chr5 58187369 58188016 -141442134 - L2 LINE L2 -829 2485 1867 22 0 0 0 chr5 58188289 58188311 -141441839 + AT_rich Low_complexity Low_complexity 1 22 0 507 98 49 0 chr5 58188929 58189011 -141441139 + L1MA9 LINE L1 6223 6308 -4 1538 141 43 13 chr5 58189366 58189494 -141440656 + L1MA8 LINE L1 5975 6098 -193 2137 124 0 3 chr5 58189494 58189793 -141440357 + AluSx SINE Alu 1 298 -14 1538 141 43 13 chr5 58189793 58189969 -141440181 + L1MA8 LINE L1 6098 6288 -3 544 167 16 48 chr5 58189985 58190111 -141440039 + L1MC4 LINE L1 7921 8042 0 647 256 6 18 chr5 58190120 58190284 -141439866 + L2 LINE L2 2619 2780 -534 925 286 35 40 chr5 58190291 58190662 -141439488 + L2 LINE L2 2944 3312 -1 2120 117 0 0 chr5 58191062 58191368 -141438782 + AluSg SINE Alu 1 306 0 2179 94 0 7 chr5 58191401 58191689 -141438461 - AluSc SINE Alu -17 292 7 218 171 0 13 chr5 58192093 58192169 -141437981 + T-rich Low_complexity Low_complexity 4 78 0 58 38 0 0 chr5 58192169 58192248 -141437902 + AT_rich Low_complexity Low_complexity 1 79 0 4449 157 49 6 chr5 58192248 58193543 -141436607 + L1MA8 LINE L1 4463 5837 -454 375 78 0 0 chr5 58193543 58193594 -141436556 + (CA)n Simple_repeat Simple_repeat 2 52 0 4449 157 49 6 chr5 58193594 58193873 -141436277 + L1MA8 LINE L1 5837 6103 -188 1854 159 37 11 chr5 58193858 58194026 -141436124 - L1MC1 LINE L1 -188 6145 5983 * 2015 146 0 0 chr5 58194026 58194327 -141435823 - AluSq SINE Alu -12 301 1 1854 159 37 11 chr5 58194327 58194511 -141435639 - L1MC1 LINE L1 -350 5983 5784 447 265 121 19 chr5 58194817 58195032 -141435118 - L1MC4a LINE L1 -1836 5972 5736 22 0 0 0 chr5 58195032 58195054 -141435096 + AT_rich Low_complexity Low_complexity 1 22 0 1323 195 185 23 chr5 58196748 58196974 -141433176 - MLT1C LTR MaLR -4 463 275 270 0 0 0 chr5 58196974 58197004 -141433146 + (TG)n Simple_repeat Simple_repeat 2 31 0 1323 195 185 23 chr5 58197004 58197171 -141432979 - MLT1C LTR MaLR -192 275 6 180 300 67 0 chr5 58199496 58199556 -141430594 + MIR SINE MIR 121 184 -78 684 245 86 23 chr5 58200618 58200920 -141429230 + L1MC5 LINE L1 7609 7929 -32 24 32 0 0 chr5 58201179 58201210 -141428940 + AT_rich Low_complexity Low_complexity 1 31 0 7103 181 36 18 chr5 58201406 58201867 -141428283 + L1M3 LINE L1 3832 4283 -1885 1850 147 49 0 chr5 58201867 58202152 -141427998 + AluJb SINE Alu 1 299 -13 7103 181 36 18 chr5 58202152 58203318 -141426832 + L1M3 LINE L1 4283 5489 -679 577 113 0 0 chr5 58203323 58203403 -141426747 + AluS SINE Alu 1 80 -232 8782 230 35 24 chr5 58204467 58206943 -141423207 - L1 LINE L1 -1862 5305 3034 1388 170 43 63 chr5 58206943 58207243 -141422907 - AluJo SINE Alu -18 294 1 8782 230 35 24 chr5 58207243 58208923 -141421227 - L1 LINE L1 -4133 3034 1375 314 194 136 0 chr5 58208923 58209026 -141421124 + Charlie1 DNA MER1_type 2640 2756 -5 293 306 61 14 chr5 58209085 58209232 -141420918 + L1MC4 LINE L1 7068 7221 -821 506 294 14 27 chr5 58209940 58210086 -141420064 - Tigger8 DNA MER2_type -499 167 24 398 269 198 35 chr5 58210257 58210454 -141419696 - MIR SINE MIR -14 248 20 7310 35 2 6 chr5 58211821 58213281 -141416869 + L1PA4 LINE L1 4707 6154 -1 1253 98 10 54 chr5 58213292 58213495 -141416655 + THE1B LTR MaLR 171 364 0 269 190 0 0 chr5 58213495 58213553 -141416597 - L1M LINE L1 -896 5408 5351 * 1852 209 36 18 chr5 58213527 58213968 -141416182 - L1 LINE L1 -952 6613 6165 17861 161 38 21 chr5 58213968 58214935 -141415215 - L1 LINE L1 -4286 3279 2329 1598 181 0 4 chr5 58214935 58215184 -141414966 - AluSx SINE Alu -61 251 4 17861 161 38 21 chr5 58215184 58216960 -141413190 - L1 LINE L1 -5236 2329 584 2509 125 54 7 chr5 58216960 58217369 -141412781 + MSTA LTR MaLR 1 428 0 17861 161 38 21 chr5 58217369 58217798 -141412352 - L1 LINE L1 -6981 584 50 2160 118 7 3 chr5 58217798 58218103 -141412047 - AluSx SINE Alu -6 306 1 17861 161 38 21 chr5 58218103 58218154 -141411996 - L1 LINE L1 -7515 50 1 1599 200 24 3 chr5 58218220 58218510 -141411640 - AluJo SINE Alu -12 300 5 32 0 0 0 chr5 58218538 58218570 -141411580 + AT_rich Low_complexity Low_complexity 1 32 0 648 281 46 41 chr5 58219682 58220146 -141410004 + LTR33 LTR ERVL 16 521 0 187 286 60 48 chr5 58220271 58220355 -141409795 + L2 LINE L2 3150 3234 -38 652 192 30 24 chr5 58220422 58220589 -141409561 + MLT1J2 LTR MaLR 54 221 -229 27 49 0 0 chr5 58220842 58220883 -141409267 + AT_rich Low_complexity Low_complexity 1 41 0 252 0 0 0 chr5 58221205 58221233 -141408917 + (A)n Simple_repeat Simple_repeat 1 28 0 2227 112 3 0 chr5 58221292 58221587 -141408563 + AluSx SINE Alu 1 296 -16 333 0 0 0 chr5 58221714 58221751 -141408399 + (CA)n Simple_repeat Simple_repeat 2 38 0 1469 145 204 0 chr5 58222105 58222394 -141407756 + MER7A DNA MER2_type 1 346 0 1790 86 0 4 chr5 58223427 58223683 -141406467 + L1P3 LINE L1 4320 4574 -1572 1154 95 6 22 chr5 58223657 58223836 -141406314 + L1P3 LINE L1 5461 5636 -518 * 6720 46 12 55 chr5 58223836 58225478 -141404672 + L1PA7 LINE L1 4551 6154 0 702 142 90 0 chr5 58227342 58227476 -141402674 - L1MC1 LINE L1 0 6333 6188 975 298 50 16 chr5 58227768 58228210 -141401940 + L1MC4a LINE L1 5479 5583 -708 728 316 65 46 chr5 58228430 58228753 -141401397 + L2 LINE L2 2985 3313 0 21 0 0 0 chr5 58229847 58229868 -141400282 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 58230253 58230284 -141399866 + AT_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr5 58230314 58230340 -141399810 + AT_rich Low_complexity Low_complexity 1 26 0 201 39 0 0 chr5 58231318 58231344 -141398806 + (TA)n Simple_repeat Simple_repeat 2 27 0 2270 107 0 3 chr5 58231346 58231655 -141398495 - AluSx SINE Alu -4 308 1 180 268 24 0 chr5 58232356 58232397 -141397753 - MIR SINE MIR -56 152 111 330 133 67 33 chr5 58233974 58234034 -141396116 + L1MB2 LINE L1 6076 6141 -30 1480 186 8 0 chr5 58234034 58234292 -141395858 - AluJo SINE Alu -4 308 49 330 133 67 33 chr5 58234292 58234321 -141395829 + L1MB2 LINE L1 6141 6168 -3 1000 270 75 44 chr5 58234521 58234906 -141395244 + MLT1K LTR MaLR 69 465 -123 977 265 57 39 chr5 58234939 58235377 -141394773 - MLT1J1 LTR MaLR 0 446 1 2490 65 0 0 chr5 58235652 58235958 -141394192 + AluY SINE Alu 2 307 -4 21 36 0 0 chr5 58237688 58237716 -141392434 + AT_rich Low_complexity Low_complexity 1 28 0 1536 120 13 70 chr5 58237963 58238263 -141391887 + L1MB2 LINE L1 5446 5728 -443 228 158 0 0 chr5 58238290 58238328 -141391822 + L1MB2 LINE L1 5722 5759 -412 333 0 0 0 chr5 58238343 58238380 -141391770 + (TG)n Simple_repeat Simple_repeat 2 38 0 2086 133 45 11 chr5 58238461 58238837 -141391313 + L1MB2 LINE L1 5783 6171 0 575 248 222 0 chr5 58240869 58241067 -141389083 + MIR SINE MIR 15 256 -6 4922 147 53 21 chr5 58241736 58242636 -141387514 + L1 LINE L1 3414 4350 -1796 736 179 0 15 chr5 58242636 58242770 -141387380 + FLAM_C SINE Alu 2 133 0 4922 147 53 21 chr5 58242770 58242863 -141387287 + L1 LINE L1 4350 4439 -1707 1210 291 45 16 chr5 58243059 58243615 -141386535 - L1MEc LINE L1 -4702 1694 1123 * 3350 243 53 36 chr5 58243613 58245004 -141385146 + L1ME1 LINE L1 2439 3853 -2293 2222 122 11 22 chr5 58245004 58245180 -141384970 + L1MC2 LINE L1 5650 5826 -518 2041 142 3 3 chr5 58245180 58245489 -141384661 + AluSx SINE Alu 1 309 -3 2222 122 11 22 chr5 58245489 58245673 -141384477 + L1MC2 LINE L1 5826 6006 -338 650 147 101 0 chr5 58245680 58245809 -141384341 + L1MC2 LINE L1 6201 6342 -2 1598 249 23 35 chr5 58245893 58246025 -141384125 + L1ME1 LINE L1 3923 4055 -2091 2036 122 7 17 chr5 58246025 58246321 -141383829 + AluSp SINE Alu 1 293 -20 1598 249 23 35 chr5 58246321 58246751 -141383399 + L1ME1 LINE L1 4055 4478 -1668 1985 218 50 31 chr5 58246926 58247444 -141382706 + L1ME1 LINE L1 5614 6141 -25 2750 195 39 57 chr5 58247501 58247997 -141382153 + L1ME1 LINE L1 5433 5913 -253 2019 120 24 3 chr5 58247997 58248289 -141381861 + AluSg SINE Alu 1 298 -12 2750 195 39 57 chr5 58248289 58248535 -141381615 + L1ME1 LINE L1 5913 6162 -4 2416 84 0 0 chr5 58248724 58249023 -141381127 - AluSx SINE Alu -13 299 1 3709 184 53 23 chr5 58249038 58249861 -141380289 + L1ME1 LINE L1 5318 6165 -1 245 372 23 8 chr5 58250190 58250319 -141379831 - MIR SINE MIR -61 147 17 22 35 0 0 chr5 58251749 58251778 -141378372 + GC_rich Low_complexity Low_complexity 1 29 0 271 231 0 88 chr5 58251910 58252001 -141378149 - L2 LINE L2 -1 3312 3230 414 303 113 55 chr5 58252091 58252543 -141377607 - L2 LINE L2 -577 2737 2260 2789 157 52 40 chr5 58252550 58253181 -141376969 - Tigger6a DNA MER2_type -388 695 2 22 35 0 0 chr5 58253194 58253223 -141376927 + AT_rich Low_complexity Low_complexity 1 29 0 1756 189 0 0 chr5 58253223 58253509 -141376641 - AluJb SINE Alu -20 292 7 22 0 0 0 chr5 58253513 58253535 -141376615 + AT_rich Low_complexity Low_complexity 1 22 0 1912 227 97 40 chr5 58253692 58254314 -141375836 - L1ME1 LINE L1 -5 6421 5765 1511 218 93 41 chr5 58254309 58255338 -141374812 - L1ME1 LINE L1 -4069 2337 1095 * 658 185 0 23 chr5 58255338 58255468 -141374682 - FLAM_A SINE Alu -2 131 5 1511 218 93 41 chr5 58255468 58255791 -141374359 - L1ME1 LINE L1 -5311 1095 790 231 268 14 0 chr5 58256239 58256310 -141373840 - L1ME1 LINE L1 -5937 459 388 447 317 201 15 chr5 58256372 58256706 -141373444 + HAL1 LINE L1 1155 1550 -957 1615 117 44 64 chr5 58256729 58257027 -141373123 + AluSx SINE Alu 21 312 0 2574 55 3 0 chr5 58257851 58258161 -141371989 + AluSx SINE Alu 1 311 -1 9236 177 38 9 chr5 58258345 58260990 -141369160 + L1PB1 LINE L1 3068 5804 -347 248 0 31 0 chr5 58260990 58261022 -141369128 + (TG)n Simple_repeat Simple_repeat 2 34 0 9236 177 38 9 chr5 58261022 58261380 -141368770 + L1PB1 LINE L1 5804 6150 -1 2341 97 7 0 chr5 58261441 58261749 -141368401 + AluSx SINE Alu 1 310 -2 212 311 33 26 chr5 58262055 58262168 -141367982 + CT-rich Low_complexity Low_complexity 3 119 -35 3041 169 32 25 chr5 58262168 58262726 -141367424 - MER68 LTR ERV1 0 562 1 212 311 33 26 chr5 58262726 58262763 -141367387 + CT-rich Low_complexity Low_complexity 119 154 0 343 269 9 46 chr5 58263305 58263348 -141366802 + MIR SINE MIR 1 44 -218 1843 170 0 16 chr5 58263348 58263654 -141366496 + AluJo SINE Alu 1 301 -11 343 269 9 46 chr5 58263654 58263718 -141366432 + MIR SINE MIR 44 104 -158 2069 114 0 42 chr5 58263824 58264132 -141366018 - AluSx SINE Alu -17 295 1 1916 75 34 45 chr5 58264248 58264379 -141365771 - AluSx SINE Alu -47 265 134 2062 120 23 3 chr5 58264379 58264679 -141365471 - AluSg SINE Alu -4 306 1 1916 75 34 45 chr5 58264679 58264815 -141365335 - AluSx SINE Alu -178 134 1 303 330 80 40 chr5 58264853 58265077 -141365073 - L1ME LINE L1 -501 5620 5388 279 345 0 0 chr5 58265134 58265221 -141364929 - MIR SINE MIR -3 259 173 1665 167 43 11 chr5 58265367 58265649 -141364501 - AluJo SINE Alu -21 291 1 417 311 53 0 chr5 58266528 58266660 -141363490 + MIR SINE MIR 100 238 -24 247 335 51 25 chr5 58266707 58266865 -141363285 + L2 LINE L2 2649 2810 -504 21 57 0 0 chr5 58266989 58267024 -141363126 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr5 58268691 58268733 -141361417 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr5 58269063 58269098 -141361052 + AT_rich Low_complexity Low_complexity 1 35 0 395 323 83 83 chr5 58270502 58270936 -141359214 - L2 LINE L2 -4 3268 2835 35 54 0 0 chr5 58270943 58270999 -141359151 + AT_rich Low_complexity Low_complexity 1 56 0 598 276 65 6 chr5 58271081 58271251 -141358899 + MIR SINE MIR 5 184 -78 210 71 0 0 chr5 58271276 58271304 -141358846 + (TTA)n Simple_repeat Simple_repeat 2 29 0 189 333 0 0 chr5 58271418 58271463 -141358687 - L2 LINE L2 -5 3267 3223 742 304 90 74 chr5 58271670 58272729 -141357421 + L1MEd LINE L1 46 1219 -4900 2259 91 0 3 chr5 58272831 58273118 -141357032 + AluSx SINE Alu 1 286 -26 444 285 59 35 chr5 58273153 58273409 -141356741 + HAL1 LINE L1 1413 1674 -833 1704 188 76 25 chr5 58273574 58273967 -141356183 + MLT2D LTR ERVL 2 414 0 2652 175 29 4 chr5 58274175 58274667 -141355483 + MLT1D LTR MaLR 1 504 -1 2115 94 7 27 chr5 58274773 58275070 -141355080 + AluSg SINE Alu 1 291 -19 580 167 0 0 chr5 58275075 58275171 -141354979 + FLAM_A SINE Alu 25 120 -22 207 0 0 0 chr5 58275192 58275215 -141354935 + (CA)n Simple_repeat Simple_repeat 2 24 0 233 290 56 23 chr5 58275226 58275440 -141354710 + L1MEd LINE L1 2853 3073 -3056 723 301 42 16 chr5 58275641 58276027 -141354123 + L1MEd LINE L1 3323 3718 -2411 351 271 15 30 chr5 58276046 58276179 -141353971 - L1MEd LINE L1 -5978 141 11 21 36 0 0 chr5 58276247 58276275 -141353875 + AT_rich Low_complexity Low_complexity 1 28 0 205 316 26 0 chr5 58276321 58276397 -141353753 + GA-rich Low_complexity Low_complexity 5 82 0 532 246 22 7 chr5 58276401 58276539 -141353611 - MIR SINE MIR 0 262 123 278 350 15 29 chr5 58276660 58276797 -141353353 - MIR3 SINE MIR -36 172 38 2158 183 75 43 chr5 58277298 58277715 -141352435 + MER63 DNA MER1_type 509 911 -150 2145 114 0 7 chr5 58277715 58278004 -141352146 + AluSx SINE Alu 5 291 -21 2158 183 75 43 chr5 58278004 58278023 -141352127 + MER63 DNA MER1_type 911 928 -133 448 254 0 49 chr5 58278023 58278145 -141352005 - FLAM_A SINE Alu -17 116 1 2158 183 75 43 chr5 58278145 58278243 -141351907 + MER63 DNA MER1_type 928 1061 0 392 218 26 0 chr5 58278741 58278819 -141351331 - MER2 DNA MER2_type -264 81 2 2255 101 0 0 chr5 58279570 58279857 -141350293 - AluSc SINE Alu -22 287 1 2230 108 0 7 chr5 58280181 58280477 -141349673 + AluSx SINE Alu 1 294 -18 3175 213 40 52 chr5 58281003 58281817 -141348333 - MER21B LTR ERV1 -58 805 1 30 59 0 0 chr5 58282999 58283050 -141347100 + AT_rich Low_complexity Low_complexity 1 51 0 403 297 29 81 chr5 58283376 58283648 -141346502 - L2 LINE L2 -937 2377 2121 189 0 0 0 chr5 58283648 58283669 -141346481 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 403 297 29 81 chr5 58283669 58283706 -141346444 - L2 LINE L2 -1193 2121 2084 246 348 72 7 chr5 58283707 58283845 -141346305 - L2 LINE L2 -1340 1974 1828 21 0 0 0 chr5 58283868 58283889 -141346261 + AT_rich Low_complexity Low_complexity 1 21 0 267 228 114 163 chr5 58283892 58284015 -141346135 - L2 LINE L2 -16 3256 3140 764 304 50 71 chr5 58284027 58284508 -141345642 - LTR67 LTR ERVL -2 555 85 1337 248 54 56 chr5 58284633 58285097 -141345053 - MLT1J LTR MaLR -48 463 1 544 343 89 42 chr5 58285372 58285867 -141344283 - L2 LINE L2 -421 2893 2376 436 250 0 32 chr5 58286416 58286540 -141343610 - MER103 DNA DNA -37 129 10 240 313 0 0 chr5 58287300 58287364 -141342786 - MIR SINE MIR -112 150 87 7096 39 0 0 chr5 58287571 58288427 -141341723 - L1PA3 LINE L1 -1 6154 5299 3897 39 0 4 chr5 58288428 58288920 -141341230 + L1PA3 LINE L1 4813 5302 -844 8057 43 0 3 chr5 58289176 58290950 -141339200 + L1PA5 LINE L1 4383 6152 -2 23 33 0 0 chr5 58290950 58290980 -141339170 + AT_rich Low_complexity Low_complexity 1 30 0 1495 149 3 75 chr5 58291956 58292277 -141337873 + AluJo SINE Alu 5 302 -10 29 28 0 0 chr5 58294212 58294248 -141335902 + AT_rich Low_complexity Low_complexity 1 36 0 2683 173 60 14 chr5 58296188 58296759 -141333391 - L1MB5 LINE L1 0 6174 5578 21 0 0 0 chr5 58297014 58297035 -141333115 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 58297459 58297489 -141332661 + AT_rich Low_complexity Low_complexity 1 30 0 9480 171 54 6 chr5 58298863 58301351 -141328799 + L1MA1 LINE L1 19 2777 -4788 7218 182 104 55 chr5 58301352 58303019 -141327131 + MER52A LTR ERV1 1 1750 -5 2163 114 35 37 chr5 58303023 58303426 -141326724 + L1MA1 LINE L1 2774 3175 -4390 * 6509 119 31 10 chr5 58303425 58304734 -141325416 + L1MA1 LINE L1 6383 7717 -4 27 0 0 0 chr5 58304746 58304773 -141325377 + AT_rich Low_complexity Low_complexity 1 27 0 201 265 54 0 chr5 58304969 58305033 -141325117 + MIR SINE MIR 89 146 -62 411 193 36 12 chr5 58305319 58305402 -141324748 + AluJo SINE Alu 50 134 -168 3195 100 51 0 chr5 58305483 58305994 -141324156 - L1MA3 LINE L1 0 6305 5769 11482 189 28 19 chr5 58306004 58308960 -141321190 - L1PA15 LINE L1 -3 6162 3160 1999 129 0 29 chr5 58308960 58309271 -141320879 - AluSg SINE Alu -8 302 1 11482 189 28 19 chr5 58309271 58309635 -141320515 - L1PA15 LINE L1 -3005 3160 2801 2244 145 27 0 chr5 58309636 58310009 -141320141 - L1MA3 LINE L1 -519 5786 5404 1211 129 0 11 chr5 58310009 58310195 -141319955 + THE1B LTR MaLR 1 184 -180 697 82 5 101 chr5 58310583 58310802 -141319348 + L1P LINE L1 3092 3289 -2857 468 271 93 34 chr5 58410856 58411104 -141219046 + HAL1 LINE L1 49 318 -2189 351 204 136 29 chr5 58411104 58411207 -141218943 + MER81 DNA DNA 1 114 0 468 271 93 34 chr5 58411207 58411249 -141218901 + HAL1 LINE L1 318 356 -2151 210 289 44 22 chr5 58411640 58411730 -141218420 + MER5A DNA MER1_type 98 189 0 2925 257 82 34 chr5 58414038 58415103 -141215047 + L1MEc LINE L1 1008 2021 -4194 2298 112 0 0 chr5 58415103 58415415 -141214735 + AluSq SINE Alu 1 312 -1 2925 257 82 34 chr5 58415415 58415692 -141214458 + L1MEc LINE L1 2021 2283 -3932 198 0 0 0 chr5 58415692 58415714 -141214436 + (TA)n Simple_repeat Simple_repeat 1 22 0 2925 257 82 34 chr5 58415714 58416459 -141213691 + L1MEc LINE L1 2283 2991 -3224 2009 118 0 7 chr5 58416459 58416739 -141213411 + AluSx SINE Alu 4 281 -31 273 57 0 0 chr5 58416742 58416777 -141213373 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2925 257 82 34 chr5 58416777 58417127 -141213023 + L1MEc LINE L1 2992 3521 -2694 1559 234 216 25 chr5 58417143 58417665 -141212485 - MLT1E2 LTR MaLR -4 622 1 455 273 73 35 chr5 58417726 58417986 -141212164 + L1MEc LINE L1 3546 3815 -2400 201 209 0 0 chr5 58418106 58418173 -141211977 + A-rich Low_complexity Low_complexity 1 67 0 212 129 105 0 chr5 58418216 58418340 -141211810 + (TA)n Simple_repeat Simple_repeat 1 137 0 417 190 6 56 chr5 58418351 58418530 -141211620 + (CATATA)n Simple_repeat Simple_repeat 5 174 0 339 187 52 22 chr5 58418546 58418937 -141211213 + (TA)n Simple_repeat Simple_repeat 1 402 0 335 188 38 70 chr5 58418965 58419151 -141210999 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 * 413 159 77 24 chr5 58419110 58419280 -141210870 + (TA)n Simple_repeat Simple_repeat 2 180 0 367 142 68 45 chr5 58419331 58419507 -141210643 + (TA)n Simple_repeat Simple_repeat 1 180 0 320 248 51 73 chr5 58420233 58420275 -141209875 - MIR SINE MIR -114 148 107 195 42 0 0 chr5 58420275 58420299 -141209851 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 320 248 51 73 chr5 58420299 58420393 -141209757 - MIR SINE MIR -155 107 15 14512 179 38 6 chr5 58420901 58425507 -141204643 - L1PBa LINE L1 -792 6070 1311 2852 235 114 22 chr5 58425511 58426566 -141203584 - L1PBa LINE L1 -5706 1157 6 1200 154 69 9 chr5 58426617 58426850 -141203300 + L1MCa LINE L1 30 276 -6150 2083 132 0 23 chr5 58426850 58427153 -141202997 + AluSq SINE Alu 1 296 -17 13761 127 14 24 chr5 58427166 58429513 -141200637 + L1P LINE L1 11 2332 -3814 6854 63 6 2 chr5 58429513 58430436 -141199714 + L1PA6 LINE L1 5240 6154 0 929 186 58 9 chr5 58430436 58430662 -141199488 + L1MCa LINE L1 268 504 -5922 242 259 0 0 chr5 58430688 58430746 -141199404 + MIR SINE MIR 161 218 -44 261 0 0 0 chr5 58431429 58431458 -141198692 + (TG)n Simple_repeat Simple_repeat 2 30 0 1356 167 29 51 chr5 58431458 58431770 -141198380 - L1ME LINE L1 -497 5669 5365 7186 168 4 7 chr5 58431988 58433722 -141196428 - L1PA13 LINE L1 0 6163 4425 306 0 0 0 chr5 58433722 58433756 -141196394 + (TG)n Simple_repeat Simple_repeat 2 35 0 * 435 38 0 0 chr5 58433755 58433808 -141196342 + (TA)n Simple_repeat Simple_repeat 1 53 0 7186 168 4 7 chr5 58433756 58434178 -141195972 - L1PA13 LINE L1 -1738 4425 4031 509 309 70 23 chr5 58434631 58434887 -141195263 + L3 LINE CR1 637 904 -673 309 371 39 27 chr5 58434919 58435178 -141194972 + L3 LINE CR1 1023 1284 -293 225 282 64 64 chr5 58435223 58435333 -141194817 + L3 LINE CR1 1463 1572 -5 1572 208 30 12 chr5 58435996 58436332 -141193818 - MER2 DNA MER2_type -1 343 2 309 26 0 0 chr5 58437206 58437244 -141192906 + (CA)n Simple_repeat Simple_repeat 2 39 0 1035 191 20 0 chr5 58437413 58437612 -141192538 + MER3 DNA MER1_type 2 204 -5 530 264 57 21 chr5 58437835 58438028 -141192122 - MIR SINE MIR -27 235 36 798 227 31 21 chr5 58438109 58438303 -141191847 + MIR SINE MIR 3 198 -64 21 0 0 0 chr5 58438339 58438360 -141191790 + AT_rich Low_complexity Low_complexity 1 21 0 215 349 23 0 chr5 58439390 58439476 -141190674 + MIR SINE MIR 57 144 -118 22 35 0 0 chr5 58441005 58441034 -141189116 + AT_rich Low_complexity Low_complexity 1 29 0 434 237 149 57 chr5 58441769 58441963 -141188187 - MIR SINE MIR -4 258 47 345 295 53 0 chr5 58442556 58442651 -141187499 - MIR SINE MIR -68 140 41 2254 124 0 0 chr5 58442801 58443108 -141187042 - AluSx SINE Alu -5 307 1 1746 178 9 15 chr5 58443334 58443666 -141186484 - MER74A LTR ERVL -215 343 14 204 239 87 0 chr5 58443832 58443878 -141186272 - MIR3 SINE MIR -29 179 130 504 271 108 42 chr5 58443885 58444125 -141186025 - MIR SINE MIR 0 262 7 187 363 26 18 chr5 58444879 58444992 -141185158 - L2 LINE L2 -31 3282 3169 512 301 105 13 chr5 58445046 58445275 -141184875 + MIR SINE MIR 7 256 -6 348 255 59 10 chr5 58445333 58445435 -141184715 - L2 LINE L2 -5 3308 3202 270 207 41 122 chr5 58445658 58445849 -141184301 - MER69 DNA AcHobo 0 2526 2 386 192 0 14 chr5 58446022 58446095 -141184055 + MIR SINE MIR 78 149 -59 827 302 25 4 chr5 58446143 58446385 -141183765 - MIR SINE MIR -12 250 4 296 303 97 36 chr5 58446401 58446566 -141183584 - MIR SINE MIR -9 253 79 2458 81 0 0 chr5 58446810 58447106 -141183044 + AluSg SINE Alu 1 296 -14 942 285 20 8 chr5 58447739 58447985 -141182165 + MIR SINE MIR 14 262 0 1390 7 0 0 chr5 58448582 58448735 -141181415 + AluYb8 SINE Alu 166 318 0 2336 82 0 7 chr5 58449094 58449399 -141180751 + AluY SINE Alu 1 303 -8 1078 261 88 26 chr5 58449515 58449968 -141180182 - LTR33 LTR ERVL -40 481 1 848 163 0 15 chr5 58450127 58450262 -141179888 + FLAM_C SINE Alu 1 133 0 34 0 0 0 chr5 58450280 58450314 -141179836 + AT_rich Low_complexity Low_complexity 1 34 0 209 254 18 0 chr5 58450612 58450667 -141179483 - L2 LINE L2 -11 3261 3206 2782 182 41 6 chr5 58450737 58451276 -141178874 - MER89 LTR ERV1 -1 558 1 248 250 80 23 chr5 58451358 58451446 -141178704 + MIR SINE MIR 78 170 -92 1934 196 70 0 chr5 58451514 58451998 -141178152 - Charlie1b DNA MER1_type -5 518 1 462 297 7 39 chr5 58453519 58453674 -141176476 + MER5A DNA MER1_type 9 158 -31 322 319 49 35 chr5 58453550 58453694 -141176456 - MER5A DNA MER1_type -26 163 18 * 254 293 107 29 chr5 58454853 58454993 -141175157 + L2 LINE L2 3163 3313 0 186 40 0 0 chr5 58455059 58455071 -141175079 + (TTTG)n Simple_repeat Simple_repeat 4 15 -13 2308 82 0 30 chr5 58455071 58455376 -141174774 + AluY SINE Alu 1 296 -15 186 40 0 0 chr5 58455376 58455388 -141174762 + (TTTG)n Simple_repeat Simple_repeat 14 28 0 734 306 74 0 chr5 58455558 58455800 -141174350 + MIR SINE MIR 3 262 0 254 178 0 0 chr5 58455979 58456024 -141174126 + MER69 DNA AcHobo 2475 2519 -7 342 356 79 15 chr5 58456408 58456610 -141173540 + L3b LINE CR1 1285 1499 -84 21 71 0 0 chr5 58458296 58458338 -141171812 + AT_rich Low_complexity Low_complexity 1 42 0 223 333 0 0 chr5 58458527 58458599 -141171551 + CT-rich Low_complexity Low_complexity 2 73 0 275 271 231 6 chr5 58458932 58459257 -141170893 - L1ME4a LINE L1 -15 6106 5709 1874 178 11 8 chr5 58460555 58460921 -141169229 - MLT1A2 LTR MaLR 0 374 8 361 186 31 72 chr5 58463185 58463282 -141166868 + MIR SINE MIR 89 181 -81 231 363 35 80 chr5 58463414 58463615 -141166535 - MIR3 SINE MIR -2 206 15 1029 157 0 13 chr5 58464749 58464908 -141165242 + AluSg/x SINE Alu 131 287 -23 2037 124 7 0 chr5 58465052 58465343 -141164807 - AluSx SINE Alu -19 293 1 535 305 112 19 chr5 58465439 58465669 -141164481 + MIR SINE MIR 7 239 -23 24 0 0 0 chr5 58465956 58465980 -141164170 + AT_rich Low_complexity Low_complexity 1 24 0 272 273 7 93 chr5 58466918 58467068 -141163082 - L2 LINE L2 -212 3060 2924 260 310 103 79 chr5 58467397 58467600 -141162550 + L2 LINE L2 3056 3263 -9 2151 108 16 47 chr5 58468407 58468794 -141161356 - THE1C LTR MaLR 0 375 1 279 400 15 0 chr5 58469235 58469365 -141160785 + MIR3 SINE MIR 45 176 -32 199 364 99 25 chr5 58469522 58469643 -141160507 - L2 LINE L2 0 3272 3143 237 192 96 0 chr5 58469989 58470062 -141160088 - MLT1J2 LTR MaLR -21 429 350 266 272 12 0 chr5 58470223 58470304 -141159846 - MLT1J2 LTR MaLR -300 150 69 426 308 10 0 chr5 58472867 58472971 -141157179 - L2 LINE L2 0 3272 3168 1200 186 84 46 chr5 58472981 58473304 -141156846 + MER2 DNA MER2_type 11 345 0 2083 65 0 11 chr5 58474216 58474492 -141155658 - L1PA7 LINE L1 -3 6151 5879 3600 48 0 0 chr5 58474492 58474926 -141155224 + L1PA7 LINE L1 5445 5878 -276 193 98 49 0 chr5 58475909 58475950 -141154200 + CT-rich Low_complexity Low_complexity 1 43 0 450 251 132 36 chr5 58476055 58476222 -141153928 - L2 LINE L2 0 3313 3131 2458 27 41 7 chr5 58477031 58477326 -141152824 - AluY SINE Alu -4 307 3 334 303 50 35 chr5 58477330 58477528 -141152622 + L1M4 LINE L1 2211 2411 -3735 1177 130 14 18 chr5 58477532 58477755 -141152395 + L1MA7 LINE L1 6065 6286 -5 24 0 0 0 chr5 58477756 58477780 -141152370 + AT_rich Low_complexity Low_complexity 1 24 0 4141 112 0 8 chr5 58478023 58478642 -141151508 + L1PB1 LINE L1 5538 6151 0 645 347 16 15 chr5 58478644 58478996 -141151154 - L2 LINE L2 -249 3064 2711 372 352 55 20 chr5 58479351 58479550 -141150600 - MIR SINE MIR -22 240 35 639 51 0 0 chr5 58479585 58479664 -141150486 - L1P LINE L1 -1867 4279 4201 1570 235 57 52 chr5 58479800 58480344 -141149806 - MLT1H LTR MaLR 0 549 3 270 286 13 0 chr5 58480421 58480498 -141149652 + (TA)n Simple_repeat Simple_repeat 2 79 0 192 219 24 0 chr5 58480608 58480649 -141149501 + MIR SINE MIR 213 254 -8 21 0 0 0 chr5 58480962 58480983 -141149167 + AT_rich Low_complexity Low_complexity 1 21 0 1945 152 0 16 chr5 58481039 58481348 -141148802 - AluJb SINE Alu -8 304 1 262 280 209 31 chr5 58481965 58482190 -141147960 - MLT1J2 LTR MaLR -119 331 67 22 0 0 0 chr5 58483688 58483710 -141146440 + AT_rich Low_complexity Low_complexity 1 22 0 1067 216 65 29 chr5 58483885 58484191 -141145959 + L1ME1 LINE L1 5845 6161 -5 966 200 16 88 chr5 58484838 58485143 -141145007 + L1MD1 LINE L1 5320 5602 -564 3240 156 18 21 chr5 58485344 58485961 -141144189 + L1MD1 LINE L1 5623 6237 -5 719 268 22 114 chr5 58485964 58486375 -141143775 + L2 LINE L2 2701 3077 -236 498 315 55 22 chr5 58487688 58487869 -141142281 - MER5A DNA MER1_type 0 189 3 413 255 134 103 chr5 58488464 58488852 -141141298 + MLT1J LTR MaLR 109 508 -3 1639 176 57 23 chr5 58490061 58490414 -141139736 - MLT1A1 LTR MaLR 0 365 1 420 282 51 39 chr5 58490841 58490997 -141139153 + MIR SINE MIR 48 205 -57 314 247 37 0 chr5 58492245 58492326 -141137824 + MIR3 SINE MIR 92 175 -33 618 286 22 27 chr5 58492440 58492664 -141137486 - MIR SINE MIR -34 228 6 324 291 0 12 chr5 58493667 58493753 -141136397 + MIR3 SINE MIR 108 192 -16 528 133 31 0 chr5 58493861 58493959 -141136191 - L1MA9 LINE L1 0 6312 6212 309 132 19 0 chr5 58493959 58494012 -141136138 + L1MA9 LINE L1 5805 5858 -454 366 23 0 0 chr5 58494690 58494733 -141135417 + (CA)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr5 58496856 58496878 -141133272 + (T)n Simple_repeat Simple_repeat 1 22 0 2115 129 3 0 chr5 58497462 58497765 -141132385 + AluSx SINE Alu 1 304 -8 248 137 20 0 chr5 58497998 58498049 -141132101 + T-rich Low_complexity Low_complexity 5 56 0 1743 232 78 21 chr5 58498153 58498588 -141131562 - MLT1C LTR MaLR -4 463 4 324 70 0 0 chr5 58499216 58499259 -141130891 + (TG)n Simple_repeat Simple_repeat 2 44 0 181 327 0 0 chr5 58500553 58500608 -141129542 + L3 LINE CR1 1520 1574 -3 1119 204 45 35 chr5 58501720 58502172 -141127978 - MLT1D LTR MaLR 0 505 1 40 0 0 0 chr5 58502233 58502273 -141127877 + AT_rich Low_complexity Low_complexity 1 40 0 228 196 0 0 chr5 58502466 58502512 -141127638 - L1MA9 LINE L1 -22 6290 6245 255 271 141 47 chr5 58503206 58503505 -141126645 - L2 LINE L2 -802 2512 2186 2528 74 0 0 chr5 58503640 58503949 -141126201 + AluY SINE Alu 1 309 -2 416 157 0 0 chr5 58504731 58504801 -141125349 - MLT1D LTR MaLR 0 505 436 2415 194 26 13 chr5 58504801 58505259 -141124891 + MER44D DNA MER2_type 2 520 -85 1759 159 35 3 chr5 58505259 58505549 -141124601 - MER2 DNA MER2_type 0 345 47 576 146 0 11 chr5 58506392 58506481 -141123669 + MER44D DNA MER2_type 522 609 0 991 230 81 11 chr5 58506481 58506848 -141123302 - MLT1D LTR MaLR -67 438 1 336 248 9 83 chr5 58506947 58507056 -141123094 - L2 LINE L2 -21 3292 3192 421 291 89 13 chr5 58507230 58507388 -141122762 - L2 LINE L2 -580 2734 2565 411 56 0 0 chr5 58507899 58507953 -141122197 + (CA)n Simple_repeat Simple_repeat 1 54 0 732 297 16 12 chr5 58510204 58510460 -141119690 - MIR SINE MIR -3 259 3 189 0 0 0 chr5 58510712 58510733 -141119417 + (TTTTTA)n Simple_repeat Simple_repeat 3 23 0 25 0 0 0 chr5 58511466 58511491 -141118659 + AT_rich Low_complexity Low_complexity 1 25 0 410 261 39 51 chr5 58511519 58511748 -141118402 - MLT1G LTR MaLR 0 590 294 237 333 35 26 chr5 58512386 58512500 -141117650 + MER5A DNA MER1_type 7 121 -68 2346 77 3 0 chr5 58514066 58514352 -141115798 + AluSp SINE Alu 1 287 -26 390 201 21 0 chr5 58514352 58514611 -141115539 + (TA)n Simple_repeat Simple_repeat 1 264 0 272 259 62 27 chr5 58514919 58515031 -141115119 + L2 LINE L2 3184 3299 -14 37752 87 7 9 chr5 58515188 58521354 -141108796 - L1PA6 LINE L1 -7 6147 2 204 216 0 59 chr5 58521418 58521469 -141108681 + L2 LINE L2 3217 3264 -8 2040 112 0 21 chr5 58522219 58522537 -141107613 - AluY SINE Alu 0 312 1 2283 176 73 31 chr5 58522748 58523224 -141106926 - MLT1D LTR MaLR 0 505 10 487 307 61 18 chr5 58523315 58523543 -141106607 + MER112 DNA MER1_type 9 246 -14 257 151 19 0 chr5 58523790 58523843 -141106307 + CT-rich Low_complexity Low_complexity 1 54 0 193 253 12 12 chr5 58523856 58523939 -141106211 + CT-rich Low_complexity Low_complexity 5 87 0 317 279 104 13 chr5 58523959 58524113 -141106037 - L1ME4a LINE L1 -10 6111 5944 2208 117 3 0 chr5 58524413 58524722 -141105428 - AluSp SINE Alu -3 310 1 384 321 95 12 chr5 58524871 58525039 -141105111 + MER5A DNA MER1_type 7 188 -1 383 292 84 55 chr5 58525165 58525344 -141104806 - MIR3 SINE MIR -21 187 2 25 0 0 0 chr5 58526285 58526310 -141103840 + AT_rich Low_complexity Low_complexity 1 25 0 204 225 0 0 chr5 58526978 58527018 -141103132 + CT-rich Low_complexity Low_complexity 2 41 0 377 308 8 45 chr5 58527921 58528054 -141102096 - L3 LINE CR1 -40 1537 1410 901 282 56 24 chr5 58528632 58528884 -141101266 - MIR SINE MIR -1 261 2 204 319 11 32 chr5 58528886 58528980 -141101170 + MER5A DNA MER1_type 25 116 -73 2024 158 3 0 chr5 58529221 58529532 -141100618 - AluJo SINE Alu 0 312 1 308 274 36 108 chr5 58530746 58530969 -141099181 - L3b LINE CR1 -262 1321 1115 2165 113 0 0 chr5 58531558 58531894 -141098256 + AluSx SINE Alu 1 336 0 432 283 58 44 chr5 58532611 58532816 -141097334 - MIR SINE MIR -53 209 2 364 293 180 7 chr5 58532838 58532988 -141097162 - MIR SINE MIR -12 250 75 2150 133 0 0 chr5 58533781 58534075 -141096075 - AluSx SINE Alu -18 294 1 204 40 0 0 chr5 58534080 58534105 -141096045 + (TTTTTA)n Simple_repeat Simple_repeat 2 26 0 456 320 58 19 chr5 58534489 58534695 -141095455 - Charlie8 DNA MER1_type -2181 236 23 321 173 0 0 chr5 58535046 58535098 -141095052 + MER94 DNA DNA 83 134 0 285 267 61 28 chr5 58535159 58535353 -141094797 + L1MCa LINE L1 1304 1752 -1035 395 262 73 40 chr5 58535506 58535743 -141094407 + L1MCa LINE L1 1703 2285 -4141 465 303 76 0 chr5 58536252 58536397 -141093753 - MIR3 SINE MIR -21 187 32 485 19 0 0 chr5 58537170 58537224 -141092926 - L1PA2 LINE L1 -53 6102 6049 503 30 0 0 chr5 58537224 58537291 -141092859 + L1PA2 LINE L1 6087 6153 -2 25 0 0 0 chr5 58537298 58537323 -141092827 + AT_rich Low_complexity Low_complexity 1 25 0 389 320 40 34 chr5 58537352 58537527 -141092623 - L2 LINE L2 -1317 1997 1822 283 305 11 16 chr5 58537662 58537793 -141092357 + MIR SINE MIR 18 143 -65 22 0 0 0 chr5 58538047 58538069 -141092081 + AT_rich Low_complexity Low_complexity 1 22 0 1884 136 10 7 chr5 58538074 58538382 -141091768 + L1MC1 LINE L1 6007 6315 -18 1079 177 57 137 chr5 58540768 58541059 -141089091 - MLT1B LTR MaLR 0 390 142 888 81 0 8 chr5 58541059 58541183 -141088967 + L1PB1 LINE L1 6024 6146 -5 1079 177 57 137 chr5 58541183 58541315 -141088835 - MLT1B LTR MaLR -248 142 1 272 233 0 17 chr5 58541584 58541644 -141088506 + L2 LINE L2 3214 3272 0 25 31 0 0 chr5 58542483 58542515 -141087635 + AT_rich Low_complexity Low_complexity 1 32 0 680 294 80 34 chr5 58543746 58544161 -141085989 - Tigger8 DNA MER2_type -14 652 219 265 301 180 6 chr5 58545445 58545628 -141084522 - MIR SINE MIR -12 250 36 182 246 66 0 chr5 58545625 58545686 -141084464 - MIR SINE MIR -81 181 117 * 3071 231 30 5 chr5 58546041 58546829 -141083321 - L1M1 LINE L1 -4261 3304 2497 1069 198 23 0 chr5 58546830 58547087 -141083063 + L1MA4 LINE L1 6034 6296 -4 907 228 52 0 chr5 58547700 58547911 -141082239 + MER58A DNA MER1_type 2 223 -1 205 147 0 0 chr5 58549427 58549461 -141080689 - L2 LINE L2 -1 3312 3279 446 314 41 6 chr5 58549850 58550022 -141080128 + MER5B DNA MER1_type 1 178 0 195 42 0 0 chr5 58550448 58550472 -141079678 + (CAATA)n Simple_repeat Simple_repeat 2 25 0 1759 165 96 6 chr5 58550495 58550859 -141079291 - L1MB3 LINE L1 -1 6182 5786 239 200 91 27 chr5 58550864 58550974 -141079176 + (CATATA)n Simple_repeat Simple_repeat 2 118 0 310 242 11 42 chr5 58550990 58551085 -141079065 - L1MC4 LINE L1 -1339 6703 6612 434 129 20 20 chr5 58551085 58551186 -141078964 + (TA)n Simple_repeat Simple_repeat 1 101 0 27 49 0 0 chr5 58551500 58551541 -141078609 + AT_rich Low_complexity Low_complexity 1 41 0 2381 108 37 6 chr5 58552043 58552396 -141077754 - THE1B LTR MaLR 0 364 1 26 0 0 0 chr5 58553311 58553337 -141076813 + AT_rich Low_complexity Low_complexity 1 26 0 632 12 0 24 chr5 58553345 58553428 -141076722 - L1PA2 LINE L1 -2 6153 6073 33 43 0 0 chr5 58553528 58553575 -141076575 + AT_rich Low_complexity Low_complexity 1 47 0 476 353 73 59 chr5 58554067 58554475 -141075675 + L2 LINE L2 2859 3272 0 505 238 17 130 chr5 58555818 58556049 -141074101 + L2 LINE L2 2331 2535 -779 2652 249 46 5 chr5 58556049 58556676 -141073474 + MER82 DNA MER2_type 1 653 0 1034 198 72 5 chr5 58556717 58556924 -141073226 - MLT1C LTR MaLR -2 465 245 242 262 12 24 chr5 58557282 58557366 -141072784 - L1M4 LINE L1 -2714 3432 3350 671 236 118 22 chr5 58557499 58557837 -141072313 + LTR43 LTR ERV1 180 453 -59 925 131 106 5 chr5 58557858 58558066 -141072084 - MLT1C LTR MaLR -175 215 1 1437 278 40 27 chr5 58558066 58558639 -141071511 + L2 LINE L2 2567 3154 -159 351 0 0 0 chr5 58558639 58558678 -141071472 + (TA)n Simple_repeat Simple_repeat 1 39 0 1437 278 40 27 chr5 58558678 58558839 -141071311 + L2 LINE L2 3154 3311 -2 234 216 20 0 chr5 58558877 58558928 -141071222 + L2 LINE L2 3188 3239 -33 213 175 0 0 chr5 58559625 58559665 -141070485 + (TG)n Simple_repeat Simple_repeat 2 41 0 2178 118 0 0 chr5 58562147 58562434 -141067716 + AluSg SINE Alu 1 287 -23 1086 262 47 105 chr5 58562497 58563181 -141066969 - MER21B LTR ERV1 -196 667 24 2159 112 3 0 chr5 58563329 58563624 -141066526 + AluSx SINE Alu 1 296 -16 22 35 0 0 chr5 58564475 58564504 -141065646 + AT_rich Low_complexity Low_complexity 1 29 0 268 262 58 58 chr5 58564706 58564809 -141065341 + MIR SINE MIR 81 183 -79 198 0 0 0 chr5 58564857 58564879 -141065271 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 388 264 58 86 chr5 58564886 58564998 -141065152 + MER5B DNA MER1_type 4 111 -67 2505 64 6 14 chr5 58564998 58565343 -141064807 - L1PA8 LINE L1 0 6172 5831 388 264 58 86 chr5 58565343 58565404 -141064746 + MER5B DNA MER1_type 111 172 -6 180 0 0 0 chr5 58566374 58566394 -141063756 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2415 68 16 3 chr5 58566721 58567028 -141063122 + AluY SINE Alu 1 311 0 648 197 49 22 chr5 58568826 58569009 -141061141 + MER53 DNA DNA 2 189 0 24 67 0 0 chr5 58569334 58569379 -141060771 + AT_rich Low_complexity Low_complexity 1 45 0 203 295 127 42 chr5 58569884 58570050 -141060100 + L2 LINE L2 3119 3298 -15 214 256 0 0 chr5 58570195 58570238 -141059912 + (TG)n Simple_repeat Simple_repeat 2 44 0 449 228 75 94 chr5 58570330 58570662 -141059488 + MLT1J2 LTR MaLR 1 333 -117 192 311 16 16 chr5 58571147 58571208 -141058942 - L2 LINE L2 -225 3047 2987 423 106 0 0 chr5 58572400 58572466 -141057684 + (TTCC)n Simple_repeat Simple_repeat 3 68 0 2020 120 3 0 chr5 58572473 58572756 -141057394 - AluSx SINE Alu -26 286 3 413 221 12 35 chr5 58572898 58572984 -141057166 + L2 LINE L2 3229 3312 -1 485 178 19 201 chr5 58577612 58577921 -141052229 - L1MC4 LINE L1 0 8042 7790 484 73 42 10 chr5 58577923 58578019 -141052131 + (TA)n Simple_repeat Simple_repeat 2 100 0 5210 62 54 87 chr5 58578023 58578797 -141051353 - L1PA8 LINE L1 -13 6159 5411 1497 254 53 82 chr5 58578808 58579522 -141050628 - L1MC4 LINE L1 -273 7769 7076 2349 63 0 11 chr5 58579522 58579852 -141050298 - AluY SINE Alu 0 327 1 1497 254 53 82 chr5 58579852 58579906 -141050244 - L1MC4 LINE L1 -966 7076 7022 332 274 60 0 chr5 58579938 58580022 -141050128 - L2 LINE L2 0 3313 3225 257 240 120 0 chr5 58581023 58581098 -141049052 + L2 LINE L2 3189 3272 0 488 291 191 0 chr5 58581924 58582113 -141048037 + MIR SINE MIR 19 243 -19 268 289 74 16 chr5 58582305 58582426 -141047724 - L2 LINE L2 -6 3307 3180 303 28 0 0 chr5 58582639 58582675 -141047475 + (TC)n Simple_repeat Simple_repeat 1 36 0 252 0 0 0 chr5 58582674 58582702 -141047448 + (CA)n Simple_repeat Simple_repeat 1 28 0 * 22 0 0 0 chr5 58583014 58583036 -141047114 + AT_rich Low_complexity Low_complexity 1 22 0 192 158 0 0 chr5 58583234 58583272 -141046878 + (CA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr5 58583556 58583577 -141046573 + AT_rich Low_complexity Low_complexity 1 21 0 1243 221 73 10 chr5 58583596 58583899 -141046251 - MER33 DNA MER1_type -2 322 1 23 39 0 39 chr5 58583996 58584023 -141046127 + AT_rich Low_complexity Low_complexity 1 27 -23 2134 112 7 0 chr5 58584023 58584309 -141045841 + AluSq SINE Alu 1 288 -25 23 39 0 39 chr5 58584309 58584333 -141045817 + AT_rich Low_complexity Low_complexity 27 50 0 1413 192 97 18 chr5 58584458 58584839 -141045311 - LTR37A LTR ERV1 -3 423 13 190 343 67 22 chr5 58584885 58585019 -141045131 + MIR3 SINE MIR 55 194 -14 386 238 42 58 chr5 58587154 58587343 -141042807 - L1ME4a LINE L1 -175 5946 5761 2144 130 132 43 chr5 58587375 58587728 -141042422 + MSTA LTR MaLR 1 394 -34 2295 100 0 3 chr5 58587728 58588027 -141042123 - AluSg1 SINE Alu -11 298 1 2144 130 132 43 chr5 58588027 58588066 -141042084 + MSTA LTR MaLR 394 428 0 368 216 82 41 chr5 58589012 58589109 -141041041 - L2 LINE L2 0 3272 3172 592 279 174 29 chr5 58589337 58589786 -141040364 - L2 LINE L2 0 3313 2324 1291 247 139 58 chr5 58589996 58590982 -141039168 - L2 LINE L2 -2 3311 2204 22 0 0 0 chr5 58592870 58592892 -141037258 + AT_rich Low_complexity Low_complexity 1 22 0 309 109 0 0 chr5 58593428 58593474 -141036676 + (T)n Simple_repeat Simple_repeat 1 46 0 428 321 98 18 chr5 58595377 58595713 -141034437 + L2 LINE L2 1060 1422 -1892 200 268 113 0 chr5 58595710 58595781 -141034369 + L2 LINE L2 3194 3272 0 * 1115 258 94 50 chr5 58596056 58596739 -141033411 - L2 LINE L2 -11 3302 2594 248 298 106 35 chr5 58596747 58596888 -141033262 + L2 LINE L2 1756 1906 -1408 629 311 107 10 chr5 58597080 58597389 -141032761 - MER102b DNA MER1_type 0 341 3 216 339 18 27 chr5 58597754 58597866 -141032284 + MIR SINE MIR 33 143 -119 255 358 82 32 chr5 58597884 58598200 -141031950 + L2 LINE L2 2043 2374 -940 512 265 166 61 chr5 58598257 58598619 -141031531 - MLT1J2 LTR MaLR -13 433 34 366 344 52 83 chr5 58598859 58599207 -141030943 + L2 LINE L2 2830 3162 -110 3022 58 3 0 chr5 58599207 58599566 -141030584 - L1PA5 LINE L1 0 6154 5795 366 344 52 83 chr5 58599566 58599674 -141030476 + L2 LINE L2 3162 3272 0 599 309 66 23 chr5 58600342 58600601 -141029549 + L2 LINE L2 2199 2468 -846 267 123 27 14 chr5 58600932 58601005 -141029145 + (TA)n Simple_repeat Simple_repeat 2 75 0 1516 212 0 10 chr5 58601007 58601299 -141028851 - AluJo SINE Alu -23 289 1 22 0 0 0 chr5 58602457 58602479 -141027671 + AT_rich Low_complexity Low_complexity 1 22 0 754 184 92 37 chr5 58603009 58603172 -141026978 - MER105 DNA DNA -4 200 29 2193 98 152 0 chr5 58605840 58606156 -141023994 - THE1B LTR MaLR 0 364 1 441 274 9 18 chr5 58606631 58606744 -141023406 + MER81 DNA DNA 2 113 -1 599 249 0 55 chr5 58606797 58606978 -141023172 - MER5B DNA MER1_type -7 171 1 470 198 0 0 chr5 58607154 58607235 -141022915 - MER5A DNA MER1_type -85 104 24 1620 214 52 86 chr5 58607249 58607772 -141022378 + MLT1D LTR MaLR 1 505 0 290 231 123 8 chr5 58608999 58609129 -141021021 + L1ME4a LINE L1 5977 6121 0 470 250 28 62 chr5 58611146 58611290 -141018860 - MIR SINE MIR -111 151 13 830 229 0 0 chr5 58611493 58611650 -141018500 - MER5B DNA MER1_type -6 172 16 436 309 43 12 chr5 58611646 58611808 -141018342 + L2 LINE L2 2234 2400 -914 * 366 257 0 46 chr5 58612392 58612501 -141017649 - MLT1K LTR MaLR -30 558 455 312 328 81 16 chr5 58612845 58613031 -141017119 - MLT1K LTR MaLR -369 219 22 21 0 0 0 chr5 58613165 58613186 -141016964 + AT_rich Low_complexity Low_complexity 1 21 0 189 305 85 85 chr5 58613503 58613644 -141016506 + MIR SINE MIR 66 206 -56 400 239 75 44 chr5 58614232 58614391 -141015759 - MER97b DNA MER1_type? -3 1050 887 698 221 43 55 chr5 58614453 58614688 -141015462 - MER97b DNA MER1_type? -797 256 25 1665 121 96 0 chr5 58619347 58619619 -141010531 + AluSc SINE Alu 1 298 -11 201 267 0 0 chr5 58619680 58619725 -141010425 + (CATA)n Simple_repeat Simple_repeat 2 46 0 352 296 63 1 chr5 58619741 58619875 -141010275 - MER5A DNA MER1_type -37 152 1 201 147 0 0 chr5 58620311 58620345 -141009805 + (T)n Simple_repeat Simple_repeat 1 34 0 26 30 0 0 chr5 58620689 58620722 -141009428 + AT_rich Low_complexity Low_complexity 1 33 0 396 245 66 0 chr5 58620757 58620863 -141009287 - MIR SINE MIR -74 188 76 392 205 123 33 chr5 58620892 58621014 -141009136 - MER5A DNA MER1_type -31 158 26 2845 107 0 3 chr5 58621031 58621396 -141008754 + THE1B LTR MaLR 1 364 0 330 342 95 13 chr5 58622397 58622555 -141007595 + MIR SINE MIR 63 233 -29 835 281 150 11 chr5 58622574 58623008 -141007142 - LTR33 LTR ERVL -9 512 19 237 33 0 0 chr5 58623054 58623084 -141007066 + (CA)n Simple_repeat Simple_repeat 2 31 0 335 23 23 0 chr5 58623423 58623467 -141006683 + (TA)n Simple_repeat Simple_repeat 2 46 0 2164 234 60 51 chr5 58624154 58624522 -141005628 + L1MC4 LINE L1 7093 7457 -585 2134 151 20 8 chr5 58624522 58624879 -141005271 + MER46B DNA MER2_type 1 236 0 2164 234 60 51 chr5 58624879 58625408 -141004742 + L1MC4 LINE L1 7457 7993 -49 218 313 0 16 chr5 58625494 58625558 -141004592 - MIR SINE MIR -166 96 34 466 258 83 49 chr5 58628928 58629254 -141000896 - MLT1J2 LTR MaLR -132 379 3 2328 92 0 3 chr5 58629848 58630143 -141000007 + AluSg SINE Alu 1 294 -16 252 86 0 0 chr5 58630737 58630772 -140999378 + (TG)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr5 58630890 58630912 -140999238 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr5 58631161 58631184 -140998966 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 1505 137 0 21 chr5 58631455 58631689 -140998461 + AluSg/x SINE Alu 82 310 0 725 291 49 12 chr5 58632169 58632416 -140997734 + MIR SINE MIR 7 262 0 294 143 0 0 chr5 58632652 58632701 -140997449 + (TA)n Simple_repeat Simple_repeat 1 49 0 1093 250 62 12 chr5 58632701 58633041 -140997109 - LTR37A LTR ERV1 -24 402 46 355 284 67 22 chr5 58634283 58634417 -140995733 + MIR3 SINE MIR 41 180 -28 380 340 56 60 chr5 58634732 58634964 -140995186 - L2 LINE L2 0 3272 3042 400 279 36 36 chr5 58635154 58635193 -140994957 + MER69A DNA AcHobo 34 72 -2454 1372 293 107 9 chr5 58635193 58635640 -140994510 - LTR16C LTR ERVL 0 491 1 400 279 36 36 chr5 58635640 58635740 -140994410 + MER69A DNA AcHobo 71 173 -4 228 275 158 42 chr5 58636705 58636825 -140993325 - MER5B DNA MER1_type -10 168 35 207 0 0 0 chr5 58637539 58637562 -140992588 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 215 229 76 18 chr5 58638232 58638338 -140991812 - MIR SINE MIR -62 146 64 525 259 41 35 chr5 58638585 58638634 -140991516 + HsTC2 DNA Tc2 3 50 -1848 1861 134 39 14 chr5 58638634 58638917 -140991233 + AluSx SINE Alu 1 290 -22 525 259 41 35 chr5 58638917 58639037 -140991113 + HsTC2 DNA Tc2 50 173 -1725 643 235 90 2 chr5 58639062 58639316 -140990834 + HsTC2 DNA Tc2 275 586 -1312 202 304 87 52 chr5 58640865 58641095 -140989055 - L3b LINE CR1 -212 1371 1134 807 228 55 10 chr5 58641267 58641469 -140988681 + MIR SINE MIR 15 225 -37 1989 137 19 13 chr5 58642285 58642592 -140987558 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr5 58642797 58642819 -140987331 + AT_rich Low_complexity Low_complexity 1 22 0 4021 32 2 0 chr5 58642822 58643287 -140986863 - L1PA3 LINE L1 -55 6100 5635 613 221 9 0 chr5 58643658 58643771 -140986379 + MER81 DNA DNA 1 114 0 239 363 77 33 chr5 58644586 58644768 -140985382 + MIR SINE MIR 16 205 -57 256 341 49 24 chr5 58644886 58645009 -140985141 - L2 LINE L2 0 3272 3147 765 238 48 28 chr5 58645584 58645832 -140984318 + MER112 DNA MER1_type 4 256 0 2436 86 0 0 chr5 58646910 58647212 -140982938 + AluY SINE Alu 2 303 -8 954 228 106 22 chr5 58648538 58648858 -140981292 + MLT1A1 LTR MaLR 19 365 0 283 274 118 66 chr5 58649001 58649255 -140980895 - LTR33 LTR ERVL -246 277 5 291 28 0 0 chr5 58649328 58649364 -140980786 + (TC)n Simple_repeat Simple_repeat 2 37 0 225 0 0 0 chr5 58649363 58649388 -140980762 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 1979 129 0 0 chr5 58649596 58649868 -140980282 - AluSx SINE Alu -40 272 1 348 64 0 0 chr5 58650313 58650360 -140979790 + (TG)n Simple_repeat Simple_repeat 2 48 0 666 206 29 0 chr5 58651307 58651443 -140978707 + MER5A DNA MER1_type 47 186 -3 215 265 44 44 chr5 58651511 58651579 -140978571 + L2 LINE L2 3124 3191 -81 200 405 81 0 chr5 58651886 58651997 -140978153 - MIR SINE MIR -61 147 28 551 262 38 38 chr5 58652003 58652186 -140977964 + MIR SINE MIR 51 233 -29 263 49 24 0 chr5 58652552 58652593 -140977557 + (TA)n Simple_repeat Simple_repeat 1 42 0 922 208 66 42 chr5 58652918 58653130 -140977020 - MER20 DNA MER1_type -2 217 1 1592 213 21 27 chr5 58653791 58654166 -140975984 - MLT1A2 LTR MaLR -1 373 1 2286 83 7 7 chr5 58654308 58654610 -140975540 + AluY SINE Alu 2 303 -8 30550 98 12 13 chr5 58654764 58660130 -140970020 + L1PA7 LINE L1 792 6146 -8 4615 127 40 10 chr5 58660513 58661293 -140968857 - L1MA4A LINE L1 -22 6281 5479 774 189 0 49 chr5 58661315 58661458 -140968692 - FAM SINE Alu -30 155 20 2505 154 43 33 chr5 58661465 58661619 -140968531 - L1MA4A LINE L1 -743 5403 5252 1900 155 7 0 chr5 58661619 58661909 -140968241 - AluSx SINE Alu -20 292 1 2505 154 43 33 chr5 58661909 58662395 -140967755 - L1MA4A LINE L1 -894 5252 4837 * 3542 246 109 35 chr5 58662392 58663827 -140966323 - L1M2b LINE L1 -5529 1680 68 1596 314 103 19 chr5 58665121 58666057 -140964093 - HAL1 LINE L1 -1493 1014 1 1873 99 86 53 chr5 58666313 58666616 -140963534 + AluSq SINE Alu 1 313 0 1236 120 106 5 chr5 58667912 58668106 -140962044 + MER46B DNA MER2_type 1 90 -146 1651 142 45 31 chr5 58668106 58668627 -140961523 + LTR59 LTR ERV1 4 591 -6 790 156 71 13 chr5 58668627 58668781 -140961369 + MER46B DNA MER2_type 74 236 0 422 261 117 48 chr5 58668902 58668966 -140961184 - L1ME1 LINE L1 0 6166 6108 3862 136 54 65 chr5 58668966 58669701 -140960449 + LTR8A LTR ERV1 1 727 0 422 261 117 48 chr5 58669701 58669885 -140960265 - L1ME1 LINE L1 -58 6108 5901 1625 181 147 6 chr5 58670512 58670832 -140959318 - MLT1A1 LTR MaLR 0 365 1 240 261 26 70 chr5 58671040 58671155 -140958995 - MIR3 SINE MIR -85 123 14 1053 229 51 127 chr5 58671175 58671723 -140958427 + MER110 LTR ERV1 5 491 0 3022 243 126 48 chr5 58672275 58673513 -140956637 + L1MEc LINE L1 35 1368 -5028 2271 119 0 6 chr5 58673556 58673868 -140956282 + AluSx SINE Alu 1 310 -2 398 202 11 56 chr5 58673941 58674030 -140956120 - MER58A DNA MER1_type -19 88 4 960 176 102 84 chr5 58674054 58674338 -140955812 + MER110-int LTR ERV1 4292 4580 -67 702 261 40 81 chr5 58674525 58674954 -140955196 + MER110 LTR ERV1 78 472 -19 284 330 23 0 chr5 58675132 58675220 -140954930 + MSTC LTR MaLR 1 90 -338 3183 216 97 14 chr5 58675220 58676125 -140954025 + L1M2 LINE L1 9 988 -5861 288 206 48 0 chr5 58676278 58676341 -140953809 - MER58 DNA MER1_type -8 2412 2347 1750 155 7 7 chr5 58676394 58676690 -140953460 + AluJo SINE Alu 11 306 -6 2233 77 42 0 chr5 58676858 58677145 -140953005 + AluY SINE Alu 1 299 -12 2517 83 0 3 chr5 58677414 58677728 -140952422 + AluSp SINE Alu 1 313 0 266 132 19 0 chr5 58678950 58679003 -140951147 + GA-rich Low_complexity Low_complexity 1 54 0 309 194 72 86 chr5 58679198 58679337 -140950813 - L1ME4a LINE L1 -5 6116 5980 312 340 52 0 chr5 58679357 58679454 -140950696 - L2 LINE L2 -8 3305 3204 788 126 0 0 chr5 58679467 58679578 -140950572 + FRAM SINE Alu 59 169 -7 2491 65 0 0 chr5 58679713 58680006 -140950144 - AluY SINE Alu -18 293 1 189 107 0 0 chr5 58680317 58680345 -140949805 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 531 316 109 52 chr5 58680346 58680713 -140949437 - L2 LINE L2 -13 3259 2872 1893 230 140 35 chr5 58681487 58682195 -140947955 + MER20B DNA MER1_type 1 782 -2 675 319 91 21 chr5 58683518 58683993 -140946157 + L1ME3A LINE L1 5319 5829 -341 4569 51 0 15 chr5 58684038 58684584 -140945566 - L1PA5 LINE L1 0 6154 5617 996 259 98 27 chr5 58684694 58685030 -140945120 - MLT1J LTR MaLR -22 489 130 194 103 0 51 chr5 58685305 58685344 -140944806 + (GAAA)n Simple_repeat Simple_repeat 2 38 0 193 292 239 0 chr5 58686046 58686176 -140943974 + MIR SINE MIR 92 252 -10 2818 147 31 13 chr5 58686205 58686662 -140943488 + MER4C LTR ERV1 1 465 0 1578 175 0 34 chr5 58687563 58687878 -140942272 - AluJo SINE Alu 0 305 1 238 262 57 66 chr5 58688006 58688128 -140942022 - L1MC4 LINE L1 -1339 6703 6583 234 0 0 0 chr5 58689101 58689127 -140941023 + (T)n Simple_repeat Simple_repeat 1 26 0 1790 196 16 45 chr5 58689244 58689667 -140940483 - MLT1C LTR MaLR -3 464 54 828 188 0 0 chr5 58689676 58689804 -140940346 + FLAM_C SINE Alu 1 128 -5 2016 198 3 0 chr5 58691124 58691467 -140938683 + MER7A DNA MER2_type 2 343 -3 194 0 39 0 chr5 58691511 58691537 -140938613 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 231 250 73 0 chr5 58693532 58693600 -140936550 - MER20B DNA MER1_type -597 186 114 4995 158 22 3 chr5 58693601 58694366 -140935784 - LTR39 LTR ERV1 -2 781 2 225 180 80 0 chr5 58694998 58695048 -140935102 - MER94 DNA DNA -76 58 5 2336 194 30 34 chr5 58696379 58696885 -140933265 - MLT1D LTR MaLR 0 505 2 6294 67 30 13 chr5 58696885 58697652 -140932498 - LTR17 LTR ERV1 0 780 1 787 201 52 52 chr5 58697806 58697934 -140932216 - MER96 DNA MER1_type -1 174 44 2154 106 3 10 chr5 58697934 58698249 -140931901 + AluSx SINE Alu 1 312 0 787 201 52 52 chr5 58698249 58698294 -140931856 - MER96 DNA MER1_type -130 45 1 1296 157 55 5 chr5 58698607 58698824 -140931326 - AluSx SINE Alu -84 228 1 2023 213 115 89 chr5 58699047 58699153 -140930997 - LTR48 LTR ERV1 0 787 685 4748 122 50 52 chr5 58699153 58699934 -140930216 - MER4E LTR ERV1 0 779 1 2023 213 115 89 chr5 58699934 58700594 -140929556 - LTR48 LTR ERV1 -102 685 1 1733 153 117 96 chr5 58700787 58701107 -140929043 + L1MB5 LINE L1 5522 5857 -317 2338 94 0 0 chr5 58701107 58701395 -140928755 + AluSg SINE Alu 6 293 -17 1733 153 117 96 chr5 58701395 58701563 -140928587 + L1MB5 LINE L1 5857 6020 -154 213 94 0 0 chr5 58701598 58701630 -140928520 + (CA)n Simple_repeat Simple_repeat 2 33 0 2552 190 53 96 chr5 58701651 58701760 -140928390 + L1ME1 LINE L1 5475 5587 -579 1692 196 10 6 chr5 58701760 58702071 -140928079 - AluJo SINE Alu 0 312 1 2552 190 53 96 chr5 58702071 58702187 -140927963 + L1ME1 LINE L1 5587 5706 -460 2262 111 18 103 chr5 58702187 58702585 -140927565 + THE1B LTR MaLR 1 364 0 2552 190 53 96 chr5 58702585 58703078 -140927072 + L1ME1 LINE L1 5706 6163 -3 229 191 0 24 chr5 58703110 58703152 -140926998 + L2 LINE L2 3216 3256 -16 210 239 0 0 chr5 58703715 58703761 -140926389 + CT-rich Low_complexity Low_complexity 1 46 0 595 93 206 0 chr5 58704750 58704847 -140925303 - MSTC LTR MaLR -309 119 3 2343 100 0 0 chr5 58704902 58705202 -140924948 + AluSq SINE Alu 1 300 -13 29 0 0 0 chr5 58705805 58705834 -140924316 + GC_rich Low_complexity Low_complexity 1 29 0 1589 148 7 17 chr5 58707096 58707387 -140922763 - AluSq SINE Alu -25 288 1 2421 99 0 0 chr5 58707539 58707841 -140922309 - AluSx SINE Alu -10 302 1 28 0 0 0 chr5 58707856 58707884 -140922266 + AT_rich Low_complexity Low_complexity 1 28 0 1101 117 7 7 chr5 58709108 58709262 -140920888 + AluSq SINE Alu 1 154 -159 477 168 239 9 chr5 58709366 58709479 -140920671 - MER44D DNA MER2_type -183 426 18 196 283 94 19 chr5 58709518 58709624 -140920526 + MIR SINE MIR 121 234 -28 964 61 0 23 chr5 58710125 58710257 -140919893 - AluSg/x SINE Alu -4 306 178 668 106 0 0 chr5 58710451 58710536 -140919614 - AluY SINE Alu -225 85 1 2026 98 4 7 chr5 58711508 58711785 -140918365 - AluY SINE Alu -7 304 29 983 79 0 0 chr5 58712012 58712161 -140917989 - L1PA5 LINE L1 -102 6052 5904 280 48 0 0 chr5 58712135 58712177 -140917973 + L1PA6 LINE L1 6113 6154 0 * 210 37 0 0 chr5 58712189 58712216 -140917934 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 390 206 193 54 chr5 58712328 58712551 -140917599 - L1ME4a LINE L1 -5 6116 5863 191 324 54 0 chr5 58712671 58712745 -140917405 + MIR SINE MIR 169 246 -16 * 219 91 30 0 chr5 58712719 58712752 -140917398 + L2 LINE L2 3266 3299 -14 3550 61 9 0 chr5 58713018 58713443 -140916707 + L1PA7 LINE L1 5725 6153 -1 23 0 0 0 chr5 58714520 58714543 -140915607 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 58715753 58715781 -140914369 + AT_rich Low_complexity Low_complexity 1 28 0 264 59 0 0 chr5 58716818 58716852 -140913298 + (TA)n Simple_repeat Simple_repeat 1 34 0 2245 98 7 0 chr5 58717963 58718260 -140911890 - AluSx SINE Alu -13 299 1 189 311 158 43 chr5 58718944 58719153 -140910997 + L2 LINE L2 2244 2476 -838 301 317 39 0 chr5 58719371 58719475 -140910675 - MIR3 SINE MIR -15 193 86 202 175 0 25 chr5 58719533 58719573 -140910577 + MIR SINE MIR 105 143 -119 607 236 94 140 chr5 58719629 58720128 -140910022 + MLT1H1 LTR MaLR 76 551 -4 590 159 0 37 chr5 58721666 58721773 -140908377 + MIR SINE MIR 30 132 -130 1945 123 0 54 chr5 58722057 58722373 -140907777 - AluJo SINE Alu -13 299 1 224 293 172 10 chr5 58722440 58722539 -140907611 + MIR SINE MIR 22 136 -72 310 279 229 11 chr5 58722830 58723009 -140907141 + MIR SINE MIR 36 253 -9 297 250 0 0 chr5 58723345 58723405 -140906745 + L2 LINE L2 3208 3267 -5 1366 269 110 16 chr5 58723772 58724225 -140905925 + MER20B DNA MER1_type 32 527 -256 748 219 20 0 chr5 58724247 58724398 -140905752 - MIR SINE MIR -42 220 67 274 184 142 115 chr5 58724403 58724621 -140905529 + MER20B DNA MER1_type 527 750 -33 655 226 221 64 chr5 58724765 58725123 -140905027 + L2 LINE L2 2895 3308 -5 194 227 0 15 chr5 58726057 58726123 -140904027 + GA-rich Low_complexity Low_complexity 4 68 0 22 35 0 0 chr5 58726232 58726261 -140903889 + AT_rich Low_complexity Low_complexity 1 29 0 3257 176 30 32 chr5 58726862 58727023 -140903127 + L1MA10 LINE L1 5619 5779 -555 417 39 0 0 chr5 58727023 58727074 -140903076 + (CA)n Simple_repeat Simple_repeat 2 52 0 3257 176 30 32 chr5 58727074 58727577 -140902573 + L1MA10 LINE L1 5779 6282 -52 359 315 90 88 chr5 58728040 58728383 -140901767 - L2 LINE L2 0 3272 2929 2323 138 14 24 chr5 58728602 58728931 -140901219 + MLT1A1 LTR MaLR 1 328 -37 1684 180 0 7 chr5 58728931 58729264 -140900886 - AluSx SINE Alu 0 331 1 2323 138 14 24 chr5 58729264 58729302 -140900848 + MLT1A1 LTR MaLR 328 365 0 308 322 68 0 chr5 58730352 58730470 -140899680 - L2 LINE L2 -2 3311 3186 308 344 55 0 chr5 58730657 58730820 -140899330 + MIR SINE MIR 20 191 -71 410 357 28 6 chr5 58730869 58731051 -140899099 - L2 LINE L2 -217 3055 2870 25 51 0 0 chr5 58731712 58731751 -140898399 + AT_rich Low_complexity Low_complexity 1 39 0 518 205 0 81 chr5 58731759 58731920 -140898230 - L1ME4a LINE L1 -5 6116 5969 434 327 13 0 chr5 58731942 58732095 -140898055 - L1ME LINE L1 -474 5647 5493 3617 252 147 50 chr5 58732201 58733624 -140896526 - HAL1 LINE L1 -2 2505 876 2348 99 0 6 chr5 58733624 58733938 -140896212 - AluSx SINE Alu 0 312 1 3617 252 147 50 chr5 58733938 58734285 -140895865 - HAL1 LINE L1 -1631 876 564 341 286 41 10 chr5 58734285 58734383 -140895767 - L2 LINE L2 -9 3304 3204 319 311 66 0 chr5 58734387 58734509 -140895641 - HAL1 LINE L1 -1943 564 435 * 381 207 11 0 chr5 58734493 58734580 -140895570 - HAL1 LINE L1 -2324 183 96 347 317 81 98 chr5 58735043 58735513 -140894637 - L2 LINE L2 -4 3268 2807 740 273 123 11 chr5 58735543 58736045 -140894105 + MLT1L LTR MaLR 7 598 -17 299 273 80 91 chr5 58736372 58736425 -140893725 - MIR3 SINE MIR 0 208 156 1612 191 7 7 chr5 58736425 58736719 -140893431 + AluSx SINE Alu 1 294 -18 299 273 80 91 chr5 58736719 58736841 -140893309 - MIR3 SINE MIR -52 156 35 441 0 0 0 chr5 58737024 58737073 -140893077 + (CA)n Simple_repeat Simple_repeat 2 50 0 537 302 95 14 chr5 58738956 58739178 -140890972 + MIR SINE MIR 8 247 -15 1269 110 28 0 chr5 58739410 58739592 -140890558 - AluSg/x SINE Alu -1 308 122 2781 192 64 90 chr5 58739737 58740972 -140889178 + L1ME1 LINE L1 4952 6157 -9 2051 114 14 3 chr5 58741230 58741520 -140888630 + AluSx SINE Alu 1 293 -19 26 0 0 0 chr5 58741572 58741598 -140888552 + AT_rich Low_complexity Low_complexity 1 26 0 763 82 0 0 chr5 58741866 58741964 -140888186 + L1PA5 LINE L1 1 98 -6048 * 35756 64 7 4 chr5 58741962 58747478 -140882672 + L1PA5 LINE L1 623 6154 0 195 42 0 0 chr5 58747574 58747598 -140882552 + (T)n Simple_repeat Simple_repeat 1 24 0 311 300 0 25 chr5 58747731 58747851 -140882299 - MER103 DNA DNA -49 117 1 485 278 201 39 chr5 58747960 58748298 -140881852 - L2 LINE L2 0 3313 2921 241 283 121 0 chr5 58748371 58748470 -140881680 - L2 LINE L2 -549 2765 2655 271 333 65 26 chr5 58748473 58748626 -140881524 - L2 LINE L2 -787 2527 2369 218 327 29 39 chr5 58749106 58749210 -140880940 + MIR SINE MIR 5 107 -155 396 280 45 23 chr5 58749937 58750069 -140880081 - MIR SINE MIR 0 262 128 360 0 0 0 chr5 58751056 58751096 -140879054 + (TCTA)n Simple_repeat Simple_repeat 4 43 0 1115 116 0 0 chr5 58751374 58751521 -140878629 + AluSq/x SINE Alu 1 147 -165 2279 102 3 13 chr5 58751701 58752014 -140878136 + AluSq SINE Alu 1 310 -3 286 303 70 50 chr5 58752392 58752493 -140877657 + MIR SINE MIR 6 107 -102 249 322 56 0 chr5 58752523 58752613 -140877537 + MIR SINE MIR 164 258 -4 1783 145 45 7 chr5 58752811 58753101 -140877049 + AluSx SINE Alu 3 303 -9 307 314 64 19 chr5 58753285 58753441 -140876709 - MER103 DNA DNA -1 165 3 204 244 0 0 chr5 58753645 58753686 -140876464 + CT-rich Low_complexity Low_complexity 2 42 0 469 242 60 30 chr5 58754336 58754491 -140875659 + MIR SINE MIR 16 181 -27 366 23 0 0 chr5 58755082 58755125 -140875025 + (CA)n Simple_repeat Simple_repeat 2 44 0 261 104 0 0 chr5 58755351 58755391 -140874759 + (T)n Simple_repeat Simple_repeat 1 43 -5 1214 153 161 16 chr5 58755391 58755645 -140874505 + AluSg1 SINE Alu 1 291 -18 261 104 0 0 chr5 58755645 58755652 -140874498 + (T)n Simple_repeat Simple_repeat 42 48 0 24 32 0 0 chr5 58756305 58756336 -140873814 + AT_rich Low_complexity Low_complexity 1 31 0 405 233 98 15 chr5 58756406 58756539 -140873611 + MER112 DNA MER1_type 85 228 -32 21 0 0 0 chr5 58757029 58757050 -140873100 + AT_rich Low_complexity Low_complexity 1 21 0 3003 68 5 2 chr5 58758149 58758546 -140871604 - L1PA8 LINE L1 0 6172 5775 500 265 93 47 chr5 58758981 58759196 -140870954 + MIR SINE MIR 18 242 -20 287 362 64 14 chr5 58759723 58759864 -140870286 + L2 LINE L2 3124 3271 -1 1239 251 37 82 chr5 58761580 58762115 -140868035 + MLT1J LTR MaLR 1 511 0 253 286 57 0 chr5 58762179 58762249 -140867901 + L2 LINE L2 2279 2352 -962 739 96 52 0 chr5 58762252 58762367 -140867783 - L1PA15 LINE L1 -7 6158 6038 392 248 148 0 chr5 58763064 58763165 -140866985 + L2 LINE L2 3197 3312 -1 532 278 15 85 chr5 58764216 58764486 -140865664 + L1MC4 LINE L1 7791 8041 -1 321 280 48 40 chr5 58765676 58765801 -140864349 - MIR SINE MIR -71 191 66 2132 125 0 3 chr5 58766983 58767280 -140862870 + AluSg SINE Alu 1 296 -14 1573 140 44 76 chr5 58767451 58767766 -140862384 + AluJb SINE Alu 1 305 -7 2031 121 38 0 chr5 58767989 58768279 -140861871 - AluSx SINE Alu -11 301 1 2258 95 7 0 chr5 58768288 58768584 -140861566 - AluSg SINE Alu -12 298 1 268 61 0 0 chr5 58770588 58770621 -140859529 + tRNA-Leu-TTG tRNA tRNA 1 33 -53 4570 136 102 97 chr5 58770875 58771476 -140858674 - L1MC3 LINE L1 -2 7783 7084 244 270 11 22 chr5 58771476 58771565 -140858585 - MLT1F1 LTR MaLR -456 111 24 4570 136 102 97 chr5 58771565 58772024 -140858126 - L1MC3 LINE L1 -701 7084 6629 326 256 91 16 chr5 58772624 58772745 -140857405 - MIR SINE MIR -119 143 14 5183 154 19 55 chr5 58773127 58773218 -140856932 + L1MA7 LINE L1 4325 4418 -1812 2346 75 0 13 chr5 58773218 58773526 -140856624 + AluY SINE Alu 1 304 -7 5183 154 19 55 chr5 58773526 58774547 -140855603 + L1MA7 LINE L1 4418 5390 -840 1604 174 31 0 chr5 58774547 58774835 -140855315 + AluJo SINE Alu 1 297 -15 5183 154 19 55 chr5 58774835 58774919 -140855231 + L1MA7 LINE L1 5390 5475 -755 1294 93 51 42 chr5 58774921 58775137 -140855013 - L1PA11 LINE L1 0 6174 5957 3969 151 21 49 chr5 58775137 58775452 -140854698 + L1MA7 LINE L1 5453 5775 -516 287 25 25 0 chr5 58775452 58775492 -140854658 + (TA)n Simple_repeat Simple_repeat 2 42 0 2263 78 0 3 chr5 58775501 58775783 -140854367 + AluY SINE Alu 1 281 -30 3969 151 21 49 chr5 58775783 58776310 -140853840 + L1MA7 LINE L1 5783 6289 -2 24 32 0 0 chr5 58776313 58776344 -140853806 + AT_rich Low_complexity Low_complexity 1 31 0 2111 70 4 0 chr5 58776402 58776659 -140853491 + AluSc SINE Alu 27 284 -25 437 299 63 34 chr5 58776825 58777032 -140853118 - MIR SINE MIR -13 249 37 22 35 0 0 chr5 58777172 58777201 -140852949 + AT_rich Low_complexity Low_complexity 1 29 0 454 302 53 36 chr5 58779621 58779846 -140850304 - MIR SINE MIR -3 259 31 692 189 65 0 chr5 58780691 58780844 -140849306 - L1M2 LINE L1 -6685 164 2 247 333 25 0 chr5 58780844 58780925 -140849225 - MSTC LTR MaLR -345 83 1 715 259 40 81 chr5 58781103 58781532 -140848618 - MER110 LTR ERV1 -19 472 78 960 176 102 84 chr5 58781719 58782003 -140848147 - MER110-int LTR ERV1 -67 4580 4292 398 202 11 56 chr5 58782027 58782116 -140848034 + MER58A DNA MER1_type 4 88 -19 2208 122 0 3 chr5 58782203 58782506 -140847644 - AluSx SINE Alu -10 302 1 1882 177 0 13 chr5 58783026 58783342 -140846808 - AluJo SINE Alu 0 312 1 344 283 139 6 chr5 58784731 58784904 -140845246 + MER112 DNA MER1_type 64 259 -1 214 219 97 75 chr5 58784918 58785052 -140845098 - MIR SINE MIR -56 206 71 2056 198 49 12 chr5 58785146 58785555 -140844595 + MSTB LTR MaLR 1 424 -2 927 281 109 37 chr5 58785556 58786115 -140844035 - MLT1L LTR MaLR 0 511 7 320 274 55 0 chr5 58786394 58786467 -140843683 - L2 LINE L2 -25 3247 3171 597 276 52 0 chr5 58787494 58787668 -140842482 - MER5A DNA MER1_type 0 189 7 2095 110 13 13 chr5 58787774 58788073 -140842077 + AluSx SINE Alu 1 299 -13 299 284 0 25 chr5 58789649 58789730 -140840420 + MIR SINE MIR 81 159 -103 1839 171 78 20 chr5 58790303 58790648 -140839502 - MLT1A1 LTR MaLR 0 365 1 568 248 168 25 chr5 58791777 58792015 -140838135 - L2 LINE L2 -8 3305 3034 470 276 68 97 chr5 58792022 58792362 -140837788 + L2 LINE L2 2857 3186 -86 234 0 0 0 chr5 58793019 58793045 -140837105 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 21 57 0 0 chr5 58793885 58793920 -140836230 + AT_rich Low_complexity Low_complexity 1 35 0 807 228 55 10 chr5 58798237 58798439 -140831711 + MIR SINE MIR 15 225 -37 2017 130 19 13 chr5 58799255 58799562 -140830588 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr5 58799767 58799789 -140830361 + AT_rich Low_complexity Low_complexity 1 22 0 3206 59 20 39 chr5 58799792 58800285 -140829865 - L1PA4 LINE L1 -55 6100 5617 996 259 98 27 chr5 58800395 58800731 -140829419 - MLT1J LTR MaLR -22 489 130 194 103 0 51 chr5 58801006 58801045 -140829105 + (GAAA)n Simple_repeat Simple_repeat 2 38 0 214 306 216 0 chr5 58801765 58801899 -140828251 + MIR SINE MIR 90 252 -10 2914 150 22 13 chr5 58801928 58802389 -140827761 + MER4C LTR ERV1 1 465 0 1578 175 0 34 chr5 58803289 58803604 -140826546 - AluJo SINE Alu 0 305 1 238 262 57 66 chr5 58803732 58803854 -140826296 - L1MC4 LINE L1 -1339 6703 6583 234 0 0 0 chr5 58804827 58804853 -140825297 + (T)n Simple_repeat Simple_repeat 1 26 0 1790 196 16 45 chr5 58804970 58805393 -140824757 - MLT1C LTR MaLR -3 464 54 828 188 0 0 chr5 58805402 58805530 -140824620 + FLAM_C SINE Alu 1 128 -5 2016 198 3 0 chr5 58806857 58807200 -140822950 + MER7A DNA MER2_type 2 343 -3 194 0 39 0 chr5 58807244 58807270 -140822880 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 231 250 73 0 chr5 58809264 58809332 -140820818 - MER20B DNA MER1_type -597 186 114 4995 158 22 3 chr5 58809333 58810098 -140820052 - LTR39 LTR ERV1 -2 781 2 225 180 80 0 chr5 58810730 58810780 -140819370 - MER94 DNA DNA -76 58 5 2342 196 28 32 chr5 58812111 58812617 -140817533 - MLT1D LTR MaLR 0 505 2 6316 65 30 13 chr5 58812617 58813384 -140816766 - LTR17 LTR ERV1 0 780 1 787 201 52 52 chr5 58813538 58813666 -140816484 - MER96 DNA MER1_type -1 174 44 2154 106 3 10 chr5 58813666 58813981 -140816169 + AluSx SINE Alu 1 312 0 787 201 52 52 chr5 58813981 58814026 -140816124 - MER96 DNA MER1_type -130 45 1 1296 157 55 5 chr5 58814339 58814556 -140815594 - AluSx SINE Alu -84 228 1 2049 211 115 89 chr5 58814779 58814885 -140815265 - LTR48 LTR ERV1 0 787 685 4748 122 50 52 chr5 58814885 58815666 -140814484 - MER4E LTR ERV1 0 779 1 2049 211 115 89 chr5 58815666 58816326 -140813824 - LTR48 LTR ERV1 -102 685 1 1742 157 118 89 chr5 58816519 58816835 -140813315 + L1MB5 LINE L1 5522 5858 -316 2368 96 0 0 chr5 58816835 58817128 -140813022 + AluSg SINE Alu 1 293 -17 1742 157 118 89 chr5 58817128 58817296 -140812854 + L1MB5 LINE L1 5858 6020 -154 213 94 0 0 chr5 58817331 58817363 -140812787 + (CA)n Simple_repeat Simple_repeat 2 33 0 2597 194 50 94 chr5 58817384 58817493 -140812657 + L1ME1 LINE L1 5475 5587 -579 1692 196 10 6 chr5 58817493 58817804 -140812346 - AluJo SINE Alu 0 312 1 2597 194 50 94 chr5 58817804 58817920 -140812230 + L1ME1 LINE L1 5587 5707 -459 2262 111 18 103 chr5 58817920 58818318 -140811832 + THE1B LTR MaLR 1 364 0 2597 194 50 94 chr5 58818318 58818812 -140811338 + L1ME1 LINE L1 5707 6163 -3 229 191 0 24 chr5 58818845 58818887 -140811263 + L2 LINE L2 3216 3256 -16 210 239 0 0 chr5 58819448 58819494 -140810656 + CT-rich Low_complexity Low_complexity 1 46 0 605 228 242 18 chr5 58820514 58820733 -140809417 + LTR16A1 LTR ERVL 189 456 -1 1830 222 66 54 chr5 58821007 58821506 -140808644 - MLT1D LTR MaLR 0 505 1 332 250 144 30 chr5 58821961 58822093 -140808057 + MER112 DNA MER1_type 3 149 -111 189 74 0 0 chr5 58822094 58822121 -140808029 + (CATTC)n Simple_repeat Simple_repeat 2 28 0 2154 233 60 41 chr5 58822259 58822839 -140807311 - MLT1E LTR MaLR -2 591 1 236 333 14 0 chr5 58823078 58823150 -140807000 - MIR SINE MIR -98 110 38 26 0 0 0 chr5 58824481 58824507 -140805643 + AT_rich Low_complexity Low_complexity 1 26 0 2414 70 0 6 chr5 58824956 58825268 -140804882 - AluY SINE Alu -1 310 1 469 246 123 5 chr5 58827028 58827192 -140802958 + MER5A DNA MER1_type 4 189 0 2052 121 3 14 chr5 58827252 58827549 -140802601 - AluSp SINE Alu -19 294 1 251 300 38 101 chr5 58827660 58827897 -140802253 + L2 LINE L2 2829 3050 -222 241 315 28 4 chr5 58828386 58828536 -140801614 + MIR SINE MIR 56 262 0 2335 85 0 3 chr5 58829017 58829311 -140800839 + AluSp SINE Alu 1 293 -20 439 278 183 19 chr5 58830058 58830321 -140799829 + MLT1K LTR MaLR 255 560 -28 389 273 68 15 chr5 58830489 58830621 -140799529 + MIR SINE MIR 1 139 -123 269 291 63 31 chr5 58831335 58831462 -140798688 - MER5B DNA MER1_type 0 178 48 881 236 19 0 chr5 58831484 58831692 -140798458 + MIR SINE MIR 48 259 -3 310 296 19 37 chr5 58831743 58831851 -140798299 + L2 LINE L2 3148 3253 -19 23 0 0 0 chr5 58831918 58831941 -140798209 + AT_rich Low_complexity Low_complexity 1 23 0 709 261 0 75 chr5 58832274 58832314 -140797836 + MER63A DNA MER1_type 1 42 -1646 2453 74 0 13 chr5 58832314 58832624 -140797526 + AluY SINE Alu 1 306 -5 709 261 0 75 chr5 58832624 58832809 -140797341 + MER63A DNA MER1_type 42 209 -1 628 223 26 57 chr5 58833302 58833390 -140796760 - MIR SINE MIR -58 204 115 2617 139 21 5 chr5 58833390 58833815 -140796335 - MSTB1 LTR MaLR 0 432 1 628 223 26 57 chr5 58833815 58833919 -140796231 - MIR SINE MIR -147 115 18 623 294 56 11 chr5 58834193 58834462 -140795688 + MLT1J LTR MaLR 1 281 -230 306 274 111 0 chr5 58835700 58835817 -140794333 + LTR67 LTR ERVL 428 557 0 1732 78 16 16 chr5 58835856 58836112 -140794038 - L1PA10 LINE L1 -1 6167 5912 2155 124 0 3 chr5 58836282 58836572 -140793578 + AluSx SINE Alu 1 289 -23 180 0 0 0 chr5 58836575 58836595 -140793555 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 303 201 65 84 chr5 58836731 58836885 -140793265 + Charlie7 DNA MER1_type 2462 2612 0 24 0 0 0 chr5 58836922 58836946 -140793204 + AT_rich Low_complexity Low_complexity 1 24 0 210 311 57 19 chr5 58838532 58838638 -140791512 + MIR SINE MIR 35 144 -118 480 270 33 108 chr5 58838722 58838796 -140791354 - MIR SINE MIR -48 214 136 2199 116 7 0 chr5 58838796 58839097 -140791053 - AluSx SINE Alu -9 303 1 480 270 33 108 chr5 58839097 58839247 -140790903 - MIR SINE MIR -126 136 12 1133 113 6 0 chr5 58839784 58839961 -140790189 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 245 111 44 0 chr5 58839965 58840010 -140790140 + CT-rich Low_complexity Low_complexity 2 48 0 702 73 27 0 chr5 58841678 58841788 -140788362 + (TCTA)n Simple_repeat Simple_repeat 3 115 0 330 293 122 0 chr5 58842259 58842406 -140787744 - MIR SINE MIR -82 180 16 382 314 41 41 chr5 58842835 58843007 -140787143 + MIR3 SINE MIR 20 191 -17 27 0 0 0 chr5 58843659 58843686 -140786464 + AT_rich Low_complexity Low_complexity 1 27 0 7185 156 25 15 chr5 58843773 58846097 -140784053 + L1MA6 LINE L1 3956 6300 0 339 285 192 0 chr5 58846344 58846474 -140783676 - LTR67 LTR ERVL -319 238 84 1097 265 153 18 chr5 58846512 58846968 -140783182 - LTR33 LTR ERVL -2 519 2 201 240 72 128 chr5 58847308 58847433 -140782717 + MIR SINE MIR 30 147 -61 407 328 39 6 chr5 58847451 58847631 -140782519 - L2 LINE L2 0 3313 3128 487 264 8 8 chr5 58847731 58847852 -140782298 + L2 LINE L2 3193 3313 0 211 357 99 0 chr5 58847960 58848131 -140782019 - L2 LINE L2 -418 2896 2709 216 244 22 0 chr5 58848132 58848177 -140781973 + L3 LINE CR1 1519 1564 -13 366 311 80 21 chr5 58849526 58849815 -140780335 - LTR33 LTR ERVL -8 513 208 227 29 57 0 chr5 58849835 58849870 -140780280 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 2463 90 3 0 chr5 58849875 58850185 -140779965 - AluSx SINE Alu -1 311 1 2455 180 63 6 chr5 58850185 58850663 -140779487 - MLT1D LTR MaLR 0 505 1 353 306 119 0 chr5 58850668 58850802 -140779348 - LTR33 LTR ERVL -339 182 33 1364 156 71 0 chr5 58850934 58851242 -140778908 - L1MC3 LINE L1 -1 7784 7455 591 251 144 5 chr5 58851848 58852063 -140778087 - MIR SINE MIR 0 262 18 200 316 26 43 chr5 58853419 58853536 -140776614 + MER5B DNA MER1_type 64 178 0 494 249 153 71 chr5 58853675 58854113 -140776037 + MLT1L LTR MaLR 142 615 0 331 313 137 0 chr5 58854224 58854355 -140775795 - MIR3 SINE MIR -6 202 54 257 347 114 42 chr5 58855309 58855502 -140774648 + MIR SINE MIR 1 207 -55 235 372 53 0 chr5 58855661 58855774 -140774376 - MER5A DNA MER1_type 0 189 71 390 330 0 40 chr5 58857462 58857662 -140772488 + MIR SINE MIR 19 210 -52 275 302 95 0 chr5 58858233 58858412 -140771738 + L1ME LINE L1 5462 5657 -464 312 127 12 87 chr5 58858752 58858925 -140771225 + (TCTCTG)n Simple_repeat Simple_repeat 3 162 0 1737 210 78 102 chr5 58859507 58859949 -140770201 - MLT1F1 LTR MaLR 0 567 116 2067 114 31 0 chr5 58859949 58860239 -140769911 + AluSx SINE Alu 1 299 -13 1853 109 29 11 chr5 58860243 58860518 -140769632 - AluSg SINE Alu -30 280 1 1737 210 78 102 chr5 58860518 58860651 -140769499 - MLT1F1 LTR MaLR -454 113 1 33 56 0 0 chr5 58860819 58860873 -140769277 + AT_rich Low_complexity Low_complexity 1 54 0 252 276 112 46 chr5 58861275 58861427 -140768723 - MIR SINE MIR -19 243 82 507 164 64 0 chr5 58861430 58861540 -140768610 - L2 LINE L2 0 3313 3197 362 317 144 18 chr5 58861596 58861763 -140768387 - MER5A DNA MER1_type 0 189 2 949 268 123 39 chr5 58862185 58862647 -140767503 - MLT1F1 LTR MaLR 0 567 67 1112 206 25 112 chr5 58862660 58863097 -140767053 + MLT1E2 LTR MaLR 1 399 -227 3850 221 34 10 chr5 58863111 58864206 -140765944 - L1MEc LINE L1 -2818 3328 2234 2217 129 0 0 chr5 58864210 58864519 -140765631 - AluSc SINE Alu 0 309 1 208 85 64 21 chr5 58864782 58864829 -140765321 + A-rich Low_complexity Low_complexity 5 53 0 678 340 142 31 chr5 58866095 58866282 -140763868 + L2 LINE L2 1706 1871 -1443 1097 158 16 0 chr5 58866282 58866472 -140763678 - L1PA15 LINE L1 -18 6147 5955 678 340 142 31 chr5 58866472 58867230 -140762920 + L2 LINE L2 1871 2756 -558 217 348 66 44 chr5 58867281 58867508 -140762642 + L2 LINE L2 2833 3064 -208 22 0 0 0 chr5 58868123 58868145 -140762005 + AT_rich Low_complexity Low_complexity 1 22 0 414 0 0 0 chr5 58874859 58874905 -140755245 + (TG)n Simple_repeat Simple_repeat 2 47 0 216 0 0 0 chr5 58877171 58877195 -140752955 + (CA)n Simple_repeat Simple_repeat 1 24 0 296 286 98 52 chr5 58880038 58880233 -140749917 + MIR SINE MIR 1 210 -52 713 234 85 35 chr5 58880270 58880471 -140749679 - MIR SINE MIR 0 262 52 2177 96 3 3 chr5 58880777 58881082 -140749068 + AluSx SINE Alu 1 305 0 216 316 175 9 chr5 58881556 58881670 -140748480 - MIR SINE MIR -36 172 40 1722 163 4 0 chr5 58882257 58882527 -140747623 + AluJb SINE Alu 1 271 -41 230 285 66 73 chr5 58882527 58882664 -140747486 + MER5A DNA MER1_type 43 178 -11 1852 164 21 11 chr5 58882664 58882901 -140747249 + L1MB7 LINE L1 5678 5911 -273 1852 183 16 19 chr5 58882901 58883246 -140746904 + L1MB7 LINE L1 5809 6173 -11 1852 164 21 11 chr5 58883246 58883297 -140746853 + L1MB7 LINE L1 5911 6173 -11 312 27 0 0 chr5 58883298 58883335 -140746815 + (CA)n Simple_repeat Simple_repeat 2 38 0 297 0 0 0 chr5 58883334 58883367 -140746783 + (TA)n Simple_repeat Simple_repeat 1 33 0 * 339 390 41 15 chr5 58883380 58883575 -140746575 - L3b LINE CR1 -94 1489 1290 380 185 0 25 chr5 58884759 58884840 -140745310 - L1MB7 LINE L1 -107 6077 5999 206 346 13 26 chr5 58884895 58884973 -140745177 + L2 LINE L2 3191 3267 -5 268 49 0 0 chr5 58884993 58885034 -140745116 - L1MA3 LINE L1 -5 6300 6260 420 272 223 15 chr5 58885771 58885977 -140744173 - MIR SINE MIR -5 257 9 211 182 127 18 chr5 58886969 58887024 -140743126 + L2 LINE L2 3231 3291 -22 5460 216 50 26 chr5 58887046 58889289 -140740861 + L1M2c LINE L1 68 2256 -4532 2106 119 3 0 chr5 58889289 58889609 -140740541 + AluSp SINE Alu 1 321 0 5460 216 50 26 chr5 58889609 58890561 -140739589 + L1M2c LINE L1 2256 3184 -3604 2434 64 3 3 chr5 58890561 58890856 -140739294 - AluY SINE Alu -16 295 1 5460 216 50 26 chr5 58890856 58891095 -140739055 + L1M2c LINE L1 3184 3416 -3372 2055 156 0 0 chr5 58891095 58891397 -140738753 + AluSx SINE Alu 1 302 -10 5460 216 50 26 chr5 58891397 58891449 -140738701 + L1M2c LINE L1 3416 4117 -2671 * 5679 133 31 8 chr5 58891441 58891473 -140738677 + L1MA5A LINE L1 5338 5368 -929 2185 129 0 3 chr5 58891473 58891783 -140738367 + AluSx SINE Alu 1 309 -3 5679 133 31 8 chr5 58891783 58892688 -140737462 + L1MA5A LINE L1 5368 6296 -1 29 28 0 0 chr5 58892688 58892724 -140737426 + AT_rich Low_complexity Low_complexity 1 36 0 677 239 15 0 chr5 58893870 58894000 -140736150 + MER94 DNA DNA 3 134 0 196 160 53 160 chr5 58894739 58894814 -140735336 + L3 LINE CR1 755 821 -756 730 199 66 18 chr5 58895503 58895596 -140734554 - MER5B DNA MER1_type -4 174 68 303 28 0 0 chr5 58895596 58895632 -140734518 + (TG)n Simple_repeat Simple_repeat 1 36 0 730 199 66 18 chr5 58895632 58895704 -140734446 - MER5B DNA MER1_type -110 68 1 266 201 161 52 chr5 58895793 58895967 -140734183 - Charlie7 DNA MER1_type 0 2612 2420 186 333 65 16 chr5 58896014 58896137 -140734013 + L2 LINE L2 2685 2813 -501 268 371 88 50 chr5 58896151 58896493 -140733657 + L2 LINE L2 2918 3272 0 947 198 17 6 chr5 58896936 58897108 -140733042 - MER5B DNA MER1_type 0 178 5 24 0 0 0 chr5 58897167 58897191 -140732959 + AT_rich Low_complexity Low_complexity 1 24 0 1601 170 13 40 chr5 58897774 58898074 -140732076 + AluJo SINE Alu 1 292 -20 2226 104 3 0 chr5 58899750 58900047 -140730103 + AluY SINE Alu 1 298 -13 306 326 48 37 chr5 58900135 58900322 -140729828 - MER5A DNA MER1_type 0 189 1 * 391 321 84 9 chr5 58900322 58900641 -140729509 - L2 LINE L2 -1006 2308 1966 270 313 235 0 chr5 58900682 58900797 -140729353 + L2 LINE L2 3122 3263 -9 765 238 48 28 chr5 58902156 58902404 -140727746 - MER112 DNA MER1_type 0 256 4 268 333 49 24 chr5 58902979 58903102 -140727048 + L2 LINE L2 3147 3272 0 214 359 83 33 chr5 58903220 58903401 -140726749 - MIR SINE MIR -57 205 16 613 221 9 0 chr5 58904217 58904330 -140725820 - MER81 DNA DNA 0 114 1 4500 50 0 0 chr5 58904700 58905221 -140724929 + L1PA4 LINE L1 5635 6155 0 675 319 91 21 chr5 58905266 58905741 -140724409 - L1ME3A LINE L1 -341 5829 5319 1863 230 140 37 chr5 58907063 58907772 -140722378 - MER20B DNA MER1_type -2 782 1 531 316 109 52 chr5 58908546 58908913 -140721237 + L2 LINE L2 2872 3259 -13 189 107 0 0 chr5 58908914 58908942 -140721208 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2491 65 0 0 chr5 58909253 58909546 -140720604 + AluY SINE Alu 1 293 -18 788 126 0 0 chr5 58909681 58909792 -140720358 - FRAM SINE Alu -7 169 59 312 340 52 0 chr5 58909805 58909902 -140720248 + L2 LINE L2 3204 3305 -8 309 194 72 86 chr5 58909922 58910061 -140720089 + L1ME4a LINE L1 5980 6116 -5 266 132 19 0 chr5 58910256 58910309 -140719841 + CT-rich Low_complexity Low_complexity 1 54 0 2517 83 0 3 chr5 58911531 58911845 -140718305 - AluSp SINE Alu 0 313 1 2233 77 42 0 chr5 58912114 58912401 -140717749 - AluY SINE Alu -12 299 1 1750 155 7 7 chr5 58912569 58912865 -140717285 - AluJo SINE Alu -6 306 11 288 206 48 0 chr5 58912918 58912981 -140717169 + MER58 DNA MER1_type 2347 2412 -8 3183 216 97 14 chr5 58913134 58914039 -140716111 - L1M2 LINE L1 -5861 988 9 284 330 23 0 chr5 58914039 58914127 -140716023 - MSTC LTR MaLR -338 90 1 702 261 40 81 chr5 58914305 58914734 -140715416 - MER110 LTR ERV1 -19 472 78 960 176 102 84 chr5 58914921 58915205 -140714945 - MER110-int LTR ERV1 -67 4580 4292 398 202 11 56 chr5 58915229 58915318 -140714832 + MER58A DNA MER1_type 4 88 -19 2271 119 0 6 chr5 58915391 58915703 -140714447 - AluSx SINE Alu -2 310 1 3022 243 126 48 chr5 58915746 58916984 -140713166 - L1MEc LINE L1 -5028 1368 35 1053 229 51 127 chr5 58917536 58918084 -140712066 - MER110 LTR ERV1 0 468 5 240 261 26 70 chr5 58918104 58918219 -140711931 + MIR3 SINE MIR 14 123 -85 1625 181 147 6 chr5 58918427 58918747 -140711403 + MLT1A1 LTR MaLR 1 365 0 435 264 112 48 chr5 58919374 58919559 -140710591 + L1ME1 LINE L1 5901 6108 -58 3862 136 54 65 chr5 58919559 58920294 -140709856 - LTR8A LTR ERV1 0 727 1 435 264 112 48 chr5 58920294 58920358 -140709792 + L1ME1 LINE L1 6108 6166 0 790 156 71 13 chr5 58920479 58920633 -140709517 - MER46B DNA MER2_type 0 236 74 1651 142 45 31 chr5 58920633 58921154 -140708996 - LTR59 LTR ERV1 -6 591 4 1236 120 106 5 chr5 58921154 58921348 -140708802 - MER46B DNA MER2_type -146 90 1 1873 99 86 53 chr5 58922643 58922946 -140707204 - AluSq SINE Alu 0 313 1 1596 314 103 19 chr5 58923202 58924138 -140706012 + HAL1 LINE L1 1 1014 -1493 3542 246 109 35 chr5 58925432 58926867 -140703283 + L1M2b LINE L1 68 1680 -5529 2505 154 43 33 chr5 58926864 58927350 -140702800 + L1MA4A LINE L1 4837 5336 -894 * 1900 155 7 0 chr5 58927350 58927640 -140702510 + AluSx SINE Alu 1 292 -20 2505 154 43 33 chr5 58927640 58927794 -140702356 + L1MA4A LINE L1 5336 5487 -743 774 189 0 49 chr5 58927801 58927944 -140702206 + FAM SINE Alu 20 155 -30 4614 128 40 9 chr5 58927966 58928745 -140701405 + L1MA4A LINE L1 5479 6281 -22 27709 96 11 21 chr5 58929128 58935583 -140694567 - L1PA7 LINE L1 -8 6461 1 2423 99 0 0 chr5 58935583 58935887 -140694263 - AluSx SINE Alu -8 304 1 194 319 151 42 chr5 58936192 58936311 -140693839 + MIR SINE MIR 20 151 -111 1932 174 0 13 chr5 58936411 58936727 -140693423 - AluJo SINE Alu 0 312 1 277 281 140 6 chr5 58938116 58938280 -140691870 + MER112 DNA MER1_type 64 249 -11 215 219 97 75 chr5 58938303 58938437 -140691713 - MIR SINE MIR -56 206 71 1879 198 49 12 chr5 58938531 58938940 -140691210 + MSTB LTR MaLR 1 424 -2 751 281 109 37 chr5 58938941 58939500 -140690650 - MLT1L LTR MaLR 0 511 7 301 282 56 0 chr5 58939780 58939851 -140690299 - L2 LINE L2 -26 3246 3172 607 270 52 0 chr5 58940879 58941053 -140689097 - MER5A DNA MER1_type 0 189 7 2176 107 10 13 chr5 58941159 58941459 -140688691 + AluSx SINE Alu 1 299 -13 296 281 0 37 chr5 58943033 58943115 -140687035 + MIR SINE MIR 81 159 -103 1672 168 78 20 chr5 58943688 58944033 -140686117 - MLT1A1 LTR MaLR 0 365 1 576 248 168 25 chr5 58945163 58945401 -140684749 - L2 LINE L2 -8 3305 3034 480 285 65 94 chr5 58945408 58945748 -140684402 + L2 LINE L2 2857 3186 -86 234 0 0 0 chr5 58946405 58946431 -140683719 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 21 57 0 0 chr5 58947270 58947305 -140682845 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 58951843 58951871 -140678279 + AT_rich Low_complexity Low_complexity 1 28 0 290 279 264 7 chr5 58953467 58953607 -140676543 + MIR3 SINE MIR 15 190 -18 1610 134 4 8 chr5 58954141 58954403 -140675747 + AluJo SINE Alu 47 307 0 180 239 55 92 chr5 58955121 58955230 -140674920 + L3 LINE CR1 1325 1429 -148 5915 154 61 42 chr5 58955333 58956550 -140673600 - ERVL LTR ERVL -1549 4215 2941 505 291 48 57 chr5 58956842 58957072 -140673078 + L2 LINE L2 3081 3308 -5 1785 137 14 21 chr5 58957513 58957822 -140672328 - AluSq SINE Alu 0 307 1 240 179 21 147 chr5 58958876 58958971 -140671179 - MER5A DNA MER1_type 0 189 107 2164 118 0 51 chr5 58959009 58959364 -140670786 + MER1B DNA MER1_type 1 337 0 33 80 0 0 chr5 58961434 58961509 -140668641 + AT_rich Low_complexity Low_complexity 1 75 0 1083 129 5 45 chr5 58961581 58961782 -140668368 - MER20 DNA MER1_type 0 219 27 22 0 0 0 chr5 58962753 58962775 -140667375 + AT_rich Low_complexity Low_complexity 1 22 0 2027 114 0 28 chr5 58963222 58963542 -140666608 + AluSx SINE Alu 1 312 0 246 343 157 0 chr5 58965195 58965303 -140664847 + L2 LINE L2 3148 3272 0 894 221 10 10 chr5 58965812 58966020 -140664130 + MER3 DNA MER1_type 1 208 -1 22 35 0 0 chr5 58973589 58973618 -140656532 + AT_rich Low_complexity Low_complexity 1 29 0 2191 111 0 0 chr5 58973625 58973922 -140656228 + AluY SINE Alu 1 297 -14 6219 29 1 0 chr5 58973941 58974701 -140655449 - L1PA5 LINE L1 -2 6152 5392 24 53 0 0 chr5 58975124 58975162 -140654988 + AT_rich Low_complexity Low_complexity 1 38 0 271 301 148 41 chr5 58975340 58975650 -140654500 - L2 LINE L2 -16 3297 2911 2425 84 3 10 chr5 58975654 58975963 -140654187 + AluSp SINE Alu 1 307 -6 202 333 79 36 chr5 58976067 58976232 -140653918 - L2 LINE L2 -510 2804 2633 273 304 0 0 chr5 58976649 58976728 -140653422 + (TG)n Simple_repeat Simple_repeat 2 80 0 276 30 0 0 chr5 58976803 58976836 -140653314 + (TG)n Simple_repeat Simple_repeat 2 34 0 234 0 0 0 chr5 58976922 58976948 -140653202 + (TG)n Simple_repeat Simple_repeat 1 26 0 192 321 122 38 chr5 58977311 58977442 -140652708 + MIR SINE MIR 51 192 -70 316 330 173 6 chr5 58977783 58977956 -140652194 - L2 LINE L2 -489 2825 2624 1557 195 55 6 chr5 58978073 58978421 -140651729 + MLT1A1 LTR MaLR 1 365 0 216 235 44 15 chr5 58978796 58978864 -140651286 + MIR3 SINE MIR 138 207 -1 229 218 55 0 chr5 58979599 58979654 -140650496 + L2 LINE L2 3213 3270 -2 558 157 317 86 chr5 58980386 58980654 -140649496 + MLT2B1 LTR ERVL 191 520 0 424 269 64 14 chr5 58981037 58981178 -140648972 + MIR SINE MIR 10 157 -105 337 236 113 0 chr5 58981311 58981417 -140648733 + MIR SINE MIR 136 253 -9 230 291 159 23 chr5 58982583 58982803 -140647347 + L1MC/D LINE L1 5670 5919 -1889 1523 170 70 82 chr5 58982876 58982958 -140647192 + MSTD LTR MaLR 1 83 -313 1777 178 0 20 chr5 58982958 58983262 -140646888 - AluJb SINE Alu -13 299 2 1523 170 70 82 chr5 58983262 58983580 -140646570 + MSTD LTR MaLR 83 396 0 355 277 73 22 chr5 58983749 58983886 -140646264 - L1ME4a LINE L1 -31 6090 5947 1189 195 66 4 chr5 58983992 58984115 -140646035 + AluJo SINE Alu 1 115 -197 243 0 0 0 chr5 58984115 58984142 -140646008 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1189 195 66 4 chr5 58984142 58984259 -140645891 + AluJo SINE Alu 115 256 -56 489 76 0 0 chr5 58984266 58984332 -140645818 + (GGAGA)n Simple_repeat Simple_repeat 5 70 0 2001 129 65 17 chr5 58986254 58986610 -140643540 + THE1C LTR MaLR 3 375 0 543 317 103 28 chr5 58986728 58987186 -140642964 + L1ME4a LINE L1 4067 4558 -1588 749 271 132 55 chr5 58987281 58987865 -140642285 - HAL1 LINE L1 -592 1915 1287 314 326 75 19 chr5 58987902 58988169 -140641981 - HAL1 LINE L1 -1304 1203 922 302 278 139 0 chr5 58988226 58988334 -140641816 - HAL1 LINE L1 -1574 933 811 243 231 66 58 chr5 58988403 58988524 -140641626 + L1ME4a LINE L1 4581 4702 -1444 22 0 0 0 chr5 58988850 58988872 -140641278 + AT_rich Low_complexity Low_complexity 1 22 0 808 141 0 15 chr5 58989056 58989191 -140640959 + FLAM_C SINE Alu 1 133 0 23 0 0 0 chr5 58989224 58989247 -140640903 + AT_rich Low_complexity Low_complexity 1 23 0 670 259 81 51 chr5 58989403 58989796 -140640354 + L1ME4a LINE L1 5531 5935 -186 709 259 29 0 chr5 58990498 58990668 -140639482 - MIR SINE MIR -86 176 2 432 328 234 18 chr5 58990847 58991399 -140638751 + L2 LINE L2 1994 2664 -650 1859 160 6 10 chr5 58991654 58991966 -140638184 + AluJo SINE Alu 1 311 -1 181 266 202 32 chr5 58992446 58992540 -140637610 + L2 LINE L2 3204 3313 0 209 182 0 0 chr5 58992696 58992729 -140637421 + polypyrimidine Low_complexity Low_complexity 2 34 0 3550 238 37 0 chr5 58992779 58993398 -140636752 + L1PA13 LINE L1 5520 6161 -2 210 37 0 0 chr5 58993621 58993648 -140636502 + (TTG)n Simple_repeat Simple_repeat 1 27 0 750 206 171 31 chr5 58993886 58994114 -140636036 - MIR SINE MIR -1 261 2 282 56 0 0 chr5 58995239 58995275 -140634875 + (T)n Simple_repeat Simple_repeat 1 36 0 968 268 112 31 chr5 58995601 58996145 -140634005 + L1ME3A LINE L1 5375 5962 -208 28 91 0 0 chr5 58996306 58996383 -140633767 + AT_rich Low_complexity Low_complexity 1 77 0 476 290 212 14 chr5 58997156 58997373 -140632777 + MIR SINE MIR 2 261 -1 423 336 150 58 chr5 58997475 58998062 -140632088 + HAL1 LINE L1 1 641 -1866 226 224 0 20 chr5 58998160 58998209 -140631941 + HAL1 LINE L1 751 798 -1709 312 293 106 43 chr5 58998290 58998478 -140631672 + HAL1 LINE L1 840 1039 -1468 1814 166 23 19 chr5 58999813 59000121 -140630029 + AluJb SINE Alu 3 311 -1 400 241 14 97 chr5 59000154 59000299 -140629851 - MLT1J LTR MaLR -109 402 270 322 309 48 24 chr5 59000570 59000696 -140629454 - MIR3 SINE MIR -48 160 32 188 274 39 0 chr5 59001741 59001792 -140628358 + L2 LINE L2 2924 2976 -337 225 344 177 0 chr5 59001961 59002057 -140628093 + L2 LINE L2 3160 3272 0 2433 82 3 0 chr5 59003478 59003782 -140626368 - AluSp SINE Alu -8 305 1 714 158 13 59 chr5 59004051 59004203 -140625947 + MER5A DNA MER1_type 1 145 -44 634 242 152 49 chr5 59004761 59005005 -140625145 + Charlie8 DNA MER1_type 4 272 -2145 237 279 177 34 chr5 59005283 59005430 -140624720 + MIR SINE MIR 36 203 -59 461 272 124 23 chr5 59005580 59005797 -140624353 - MIR SINE MIR 0 262 24 185 367 20 60 chr5 59005813 59005963 -140624187 + MER5A DNA MER1_type 17 160 -29 326 190 0 52 chr5 59006047 59006163 -140623987 + GA-rich Low_complexity Low_complexity 2 111 0 216 240 400 8 chr5 59007087 59007212 -140622938 - MER5A DNA MER1_type -2 187 14 2150 106 10 0 chr5 59007878 59008180 -140621970 + AluSp SINE Alu 1 305 -8 207 69 0 0 chr5 59008505 59008534 -140621616 + (TG)n Simple_repeat Simple_repeat 2 30 0 2142 136 10 0 chr5 59008597 59008905 -140621245 - AluSx SINE Alu 0 312 2 570 278 128 65 chr5 59009144 59009543 -140620607 + MLT1H LTR MaLR 125 548 -1 237 294 0 0 chr5 59009831 59009882 -140620268 + (TG)n Simple_repeat Simple_repeat 1 51 0 2182 98 0 46 chr5 59010009 59010334 -140619816 + AluSx SINE Alu 1 310 -2 432 0 0 0 chr5 59010353 59010401 -140619749 + (TG)n Simple_repeat Simple_repeat 1 48 0 266 275 61 23 chr5 59010449 59010580 -140619570 + MER112 DNA MER1_type 124 259 -1 323 292 55 30 chr5 59010592 59010794 -140619356 - L2 LINE L2 -6 3307 3101 673 237 113 10 chr5 59011883 59011987 -140618163 - MIR SINE MIR -34 228 136 1826 179 3 0 chr5 59011987 59012289 -140617861 + AluJb SINE Alu 1 303 -9 673 237 113 10 chr5 59012289 59012378 -140617772 - MIR SINE MIR -126 136 15 1624 296 98 17 chr5 59013229 59014126 -140616024 - L2 LINE L2 0 3313 2354 361 242 8 8 chr5 59014128 59014190 -140615960 + CT-rich Low_complexity Low_complexity 3 64 -70 2204 84 0 0 chr5 59014190 59014463 -140615687 - AluSp SINE Alu -6 307 35 361 242 8 8 chr5 59014463 59014532 -140615618 + CT-rich Low_complexity Low_complexity 63 134 0 797 233 94 5 chr5 59015070 59015293 -140614857 + MIR SINE MIR 8 250 -12 479 352 162 21 chr5 59015771 59016519 -140613631 - L2 LINE L2 -896 2418 1566 22 35 0 0 chr5 59017294 59017323 -140612827 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 59017449 59017478 -140612672 + AT_rich Low_complexity Low_complexity 1 29 0 412 174 0 70 chr5 59019127 59019213 -140610937 - MER63 DNA MER1_type -87 749 44 197 317 138 14 chr5 59019709 59019854 -140610296 + L2 LINE L2 3139 3301 -12 192 77 0 0 chr5 59020600 59020626 -140609524 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1464 203 44 0 chr5 59021253 59021524 -140608626 - AluJo SINE Alu -25 287 5 186 378 63 16 chr5 59021780 59021907 -140608243 - L2 LINE L2 0 3272 3140 5748 127 47 62 chr5 59021994 59023260 -140606890 + L1MA4A LINE L1 4559 5782 -521 2333 102 0 0 chr5 59023260 59023565 -140606585 + AluSg SINE Alu 1 305 -5 5748 127 47 62 chr5 59023565 59024072 -140606078 + L1MA4A LINE L1 5782 6295 -8 861 145 7 0 chr5 59024082 59024234 -140605916 - L1MB5 LINE L1 -10 6164 6012 207 200 0 0 chr5 59024414 59024459 -140605691 + T-rich Low_complexity Low_complexity 1 45 0 572 238 28 35 chr5 59025191 59025334 -140604816 + MIR SINE MIR 1 142 -120 240 35 0 0 chr5 59026365 59026394 -140603756 + (TTTTC)n Simple_repeat Simple_repeat 1 29 0 213 39 0 0 chr5 59027506 59027532 -140602618 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 396 155 0 0 chr5 59027526 59027597 -140602553 + GA-rich Low_complexity Low_complexity 4 74 0 342 0 0 0 chr5 59029412 59029450 -140600700 + (TG)n Simple_repeat Simple_repeat 2 39 0 370 328 98 23 chr5 59030235 59030409 -140599741 - MIR3 SINE MIR -6 202 16 898 123 8 8 chr5 59030668 59030798 -140599352 - FLAM_C SINE Alu -12 131 2 660 242 111 22 chr5 59031132 59031372 -140598778 + MIR SINE MIR 7 262 0 243 288 41 14 chr5 59032364 59032437 -140597713 + MER91A DNA MER1_type 87 161 -35 294 310 150 0 chr5 59032647 59032760 -140597390 + L2 LINE L2 3137 3266 -6 423 0 0 0 chr5 59032992 59033039 -140597111 + (CA)n Simple_repeat Simple_repeat 2 48 0 22 35 0 0 chr5 59033919 59033948 -140596202 + AT_rich Low_complexity Low_complexity 1 29 0 470 287 236 5 chr5 59034687 59034882 -140595268 + MIR SINE MIR 5 244 -18 270 0 0 0 chr5 59035395 59035425 -140594725 + (TTG)n Simple_repeat Simple_repeat 1 30 0 228 300 133 0 chr5 59037071 59037161 -140592989 - L2 LINE L2 0 3313 3212 258 358 0 0 chr5 59037287 59037354 -140592796 - L2 LINE L2 -1 3271 3205 380 282 115 56 chr5 59037673 59038067 -140592083 + L1MC4a LINE L1 5491 5603 -518 232 271 43 0 chr5 59038094 59038164 -140591986 - MER117 DNA MER1_type -121 76 4 709 186 0 0 chr5 59038328 59038441 -140591709 - MER81 DNA DNA 0 114 2 2513 66 0 0 chr5 59038933 59039237 -140590913 - AluY SINE Alu -7 304 1 1854 117 4 0 chr5 59039692 59039948 -140590202 - AluSg SINE Alu -5 305 49 265 256 155 16 chr5 59040619 59040748 -140589402 - MIR SINE MIR -11 251 105 1498 147 90 54 chr5 59040910 59041189 -140588961 - AluJb SINE Alu -21 291 3 273 328 0 0 chr5 59042778 59042845 -140587305 - MIR SINE MIR -85 123 57 2013 84 70 4 chr5 59044066 59044339 -140585811 + AluSg SINE Alu 1 291 -19 27 29 0 0 chr5 59044420 59044454 -140585696 + AT_rich Low_complexity Low_complexity 1 34 0 575 194 0 8 chr5 59044510 59044644 -140585506 + CT-rich Low_complexity Low_complexity 4 136 0 380 306 228 10 chr5 59044827 59045033 -140585117 + MIR SINE MIR 2 252 -10 380 342 36 10 chr5 59045594 59045790 -140584360 + MIR3 SINE MIR 3 203 -5 302 357 58 31 chr5 59046514 59046738 -140583412 - MIR SINE MIR -13 249 20 2259 109 0 0 chr5 59047258 59047551 -140582599 + AluSx SINE Alu 1 293 -19 2044 130 76 6 chr5 59048290 59048605 -140581545 + MER1B DNA MER1_type 1 337 0 193 267 0 0 chr5 59049813 59049858 -140580292 + MIR SINE MIR 108 152 -110 315 297 69 28 chr5 59049864 59050009 -140580141 + MIR SINE MIR 112 262 0 396 40 0 0 chr5 59050168 59050218 -140579932 + (TG)n Simple_repeat Simple_repeat 2 51 0 207 0 0 0 chr5 59051120 59051143 -140579007 + (T)n Simple_repeat Simple_repeat 1 23 0 268 308 25 25 chr5 59051946 59052066 -140578084 + L2 LINE L2 3191 3310 -3 248 286 23 41 chr5 59053271 59053442 -140576708 + GA-rich Low_complexity Low_complexity 3 170 0 584 275 111 19 chr5 59053465 59053672 -140576478 + MIR SINE MIR 8 233 -29 431 331 127 55 chr5 59055891 59056034 -140574116 - L2 LINE L2 -671 2643 2512 1998 142 3 10 chr5 59056034 59056323 -140573827 + AluSx SINE Alu 1 287 -25 431 331 127 55 chr5 59056323 59057654 -140572496 - L2 LINE L2 -802 2512 1063 22 0 0 0 chr5 59057737 59057759 -140572391 + AT_rich Low_complexity Low_complexity 1 22 0 405 0 0 0 chr5 59057759 59057804 -140572346 + (TG)n Simple_repeat Simple_repeat 2 46 0 805 298 22 32 chr5 59057826 59058141 -140572009 + MLT1J LTR MaLR 147 458 -53 33 25 0 0 chr5 59058141 59058181 -140571969 + AT_rich Low_complexity Low_complexity 1 40 0 415 281 105 35 chr5 59060086 59060257 -140569893 - MIR3 SINE MIR -6 202 20 1695 144 19 16 chr5 59060604 59060861 -140569289 - AluJb SINE Alu -49 263 6 734 194 0 0 chr5 59061950 59062074 -140568076 - FLAM_C SINE Alu -16 127 4 200 233 0 0 chr5 59062075 59062118 -140568032 - MER5B DNA MER1_type -134 44 2 2256 89 4 0 chr5 59062249 59062529 -140567621 + AluSg SINE Alu 1 281 -29 3166 127 68 32 chr5 59062571 59063160 -140566990 - MER4B LTR ERV1 0 610 1 1811 145 3 51 chr5 59063990 59064301 -140565849 + AluJb SINE Alu 1 296 -16 321 73 0 0 chr5 59064322 59064363 -140565787 - LTR23 LTR ERV1 -76 361 321 1773 119 36 50 chr5 59064379 59064681 -140565469 - AluSx SINE Alu -14 298 1 2230 81 20 3 chr5 59064709 59065004 -140565146 - AluSp SINE Alu -13 300 1 514 286 88 26 chr5 59065824 59066016 -140564134 - MIR SINE MIR -3 259 56 22 0 0 0 chr5 59066522 59066544 -140563606 + AT_rich Low_complexity Low_complexity 1 22 0 591 297 19 68 chr5 59066650 59066713 -140563437 - MIR SINE MIR -5 257 192 2205 122 0 7 chr5 59066713 59067009 -140563141 - AluSx SINE Alu -18 294 1 591 297 19 68 chr5 59067009 59067211 -140562939 - MIR SINE MIR -70 192 5 611 271 75 73 chr5 59067965 59068390 -140561760 - MARNA DNA Mariner -84 502 77 21 0 0 0 chr5 59068391 59068412 -140561738 + AT_rich Low_complexity Low_complexity 1 21 0 408 275 85 43 chr5 59068474 59068685 -140561465 - MIR SINE MIR -23 239 20 187 324 29 15 chr5 59069253 59069321 -140560829 + L2 LINE L2 3227 3295 -18 216 0 0 0 chr5 59069507 59069531 -140560619 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 240 228 0 0 chr5 59070101 59070158 -140559992 + GA-rich Low_complexity Low_complexity 2 58 0 413 335 108 0 chr5 59070256 59070450 -140559700 + MIR SINE MIR 48 262 0 265 272 68 75 chr5 59071237 59071384 -140558766 + MER5A DNA MER1_type 44 189 0 1554 179 57 7 chr5 59071469 59071749 -140558401 - AluJo SINE Alu -18 294 1 29 60 0 0 chr5 59072147 59072197 -140557953 + AT_rich Low_complexity Low_complexity 1 50 0 2448 83 0 0 chr5 59072314 59072614 -140557536 - AluSq SINE Alu -13 300 1 221 151 65 7 chr5 59073201 59073340 -140556810 + (TA)n Simple_repeat Simple_repeat 1 147 0 25 31 0 0 chr5 59073349 59073381 -140556769 + AT_rich Low_complexity Low_complexity 1 32 0 548 81 81 0 chr5 59073387 59073548 -140556602 + (TA)n Simple_repeat Simple_repeat 1 174 0 373 95 69 0 chr5 59073561 59073677 -140556473 + (TA)n Simple_repeat Simple_repeat 2 125 0 1677 167 0 43 chr5 59073693 59073992 -140556158 + AluJb SINE Alu 3 288 -24 31 0 0 0 chr5 59073992 59074023 -140556127 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr5 59074173 59074196 -140555954 + AT_rich Low_complexity Low_complexity 1 23 0 222 304 7 31 chr5 59074201 59074358 -140555792 - MIR SINE MIR 0 262 52 247 341 167 0 chr5 59076052 59076184 -140553966 + MIR3 SINE MIR 19 172 -36 2350 92 3 0 chr5 59076750 59077056 -140553094 - AluSg1 SINE Alu -2 307 1 682 203 7 43 chr5 59077067 59077205 -140552945 - FLAM_A SINE Alu 0 133 1 239 270 112 0 chr5 59077219 59077308 -140552842 - MIR SINE MIR -56 206 108 2366 92 0 7 chr5 59077546 59077849 -140552301 + AluSq SINE Alu 1 301 -12 770 195 22 33 chr5 59078331 59078644 -140551506 + MLT1A1 LTR MaLR 1 363 -2 512 295 88 5 chr5 59078715 59078908 -140551242 - MIR SINE MIR -10 252 44 2161 99 24 0 chr5 59080385 59080677 -140549473 - AluSx SINE Alu -13 299 1 217 259 37 62 chr5 59082610 59082691 -140547459 + L2 LINE L2 3226 3304 -9 286 74 37 0 chr5 59082819 59082873 -140547277 + (TA)n Simple_repeat Simple_repeat 2 57 0 579 341 78 9 chr5 59082890 59083107 -140547043 - MIR SINE MIR -10 252 21 21 57 0 0 chr5 59083379 59083414 -140546736 + AT_rich Low_complexity Low_complexity 1 35 0 1217 127 14 57 chr5 59083530 59083742 -140546408 - AluJo SINE Alu -13 299 97 244 272 141 0 chr5 59085118 59085210 -140544940 - L2 LINE L2 -46 3226 3122 201 305 18 104 chr5 59085337 59085501 -140544649 - L2 LINE L2 -219 3053 2904 338 260 42 0 chr5 59087087 59087183 -140542967 + L2 LINE L2 3214 3313 0 774 249 32 5 chr5 59087495 59087684 -140542466 + MIR SINE MIR 61 254 -8 27 103 0 0 chr5 59088510 59088607 -140541543 + AT_rich Low_complexity Low_complexity 1 97 0 242 188 78 16 chr5 59090083 59090147 -140540003 - MER116 DNA Mariner -5 75 8 956 77 0 0 chr5 59090513 59090643 -140539507 - AluSp/q SINE Alu 0 313 184 248 283 81 50 chr5 59091148 59091247 -140538903 + L3b LINE CR1 1351 1452 -131 266 262 28 19 chr5 59091517 59091624 -140538526 + L1ME4a LINE L1 5956 6063 -58 31 26 0 0 chr5 59092652 59092690 -140537460 + AT_rich Low_complexity Low_complexity 1 38 0 2299 101 7 7 chr5 59092838 59093146 -140537004 - AluSx SINE Alu -4 308 1 365 328 96 0 chr5 59093598 59093775 -140536375 - MIR SINE MIR -32 230 37 290 250 0 26 chr5 59093780 59093856 -140536294 - MIR3 SINE MIR -46 162 89 217 317 98 24 chr5 59093893 59094016 -140536134 - L3b LINE CR1 -144 1439 1308 603 293 29 6 chr5 59094025 59094199 -140535951 - MER5B DNA MER1_type 0 178 1 25 0 0 0 chr5 59094680 59094705 -140535445 + AT_rich Low_complexity Low_complexity 1 25 0 324 236 129 36 chr5 59095968 59096108 -140534042 - MIR SINE MIR -52 210 58 1549 230 19 25 chr5 59096127 59096496 -140533654 + MSTD LTR MaLR 34 396 0 855 229 40 10 chr5 59096870 59097071 -140533079 + MIR SINE MIR 46 252 -10 405 276 34 16 chr5 59097458 59097593 -140532557 - MIR SINE MIR -61 147 42 360 148 0 0 chr5 59099587 59099648 -140530502 + (TATG)n Simple_repeat Simple_repeat 4 64 0 627 217 0 16 chr5 59100533 59100662 -140529488 - FLAM_A SINE Alu -10 132 6 28 29 0 0 chr5 59100779 59100814 -140529336 + AT_rich Low_complexity Low_complexity 1 35 0 750 313 88 30 chr5 59101063 59101362 -140528788 + L3 LINE CR1 975 1304 -273 1609 186 3 10 chr5 59101362 59101658 -140528492 + AluJb SINE Alu 1 294 -18 750 313 88 30 chr5 59101658 59101758 -140528392 + L3 LINE CR1 1304 1397 -180 193 299 15 30 chr5 59101894 59101961 -140528189 + L3 LINE CR1 1503 1568 -9 2087 131 3 0 chr5 59101971 59102262 -140527888 - AluSp SINE Alu -19 294 3 276 232 0 43 chr5 59102265 59102334 -140527816 + MIR SINE MIR 197 262 0 548 263 88 51 chr5 59102925 59103253 -140526897 + L2 LINE L2 114 3313 0 214 283 33 22 chr5 59103269 59103361 -140526789 - MIR SINE MIR -79 129 37 2159 125 7 3 chr5 59103378 59103682 -140526468 - AluSx SINE Alu -7 305 1 1856 108 63 66 chr5 59104529 59104945 -140525205 + THE1C LTR MaLR 1 374 -1 485 227 34 0 chr5 59105720 59105839 -140524311 + MER110 LTR ERV1 2 124 -367 321 262 28 9 chr5 59105849 59105956 -140524194 + MER110 LTR ERV1 377 485 -6 330 167 0 0 chr5 59106316 59106370 -140523780 - L1MC/D LINE L1 -655 5689 5636 301 305 104 13 chr5 59106372 59106526 -140523624 - L1ME LINE L1 -286 5835 5668 252 366 109 34 chr5 59107053 59107403 -140522747 - L2 LINE L2 -43 3229 2854 657 292 81 5 chr5 59107658 59107898 -140522252 + MIR SINE MIR 4 261 -1 271 290 68 106 chr5 59107938 59108307 -140521843 - L2 LINE L2 -853 2461 2107 359 285 168 0 chr5 59110248 59110456 -140519694 + L1MC4a LINE L1 5601 5841 -302 2536 82 11 11 chr5 59110767 59111134 -140519016 + L1PA14 LINE L1 5794 6160 -1 24 0 0 0 chr5 59113912 59113936 -140516214 + AT_rich Low_complexity Low_complexity 1 24 0 1449 181 66 10 chr5 59114919 59115207 -140514943 - AluJo SINE Alu -8 304 1 334 339 65 8 chr5 59115258 59115382 -140514768 + L2 LINE L2 3142 3272 0 414 0 0 0 chr5 59115420 59115466 -140514684 + (TG)n Simple_repeat Simple_repeat 2 47 0 459 0 0 0 chr5 59115709 59115760 -140514390 + (TG)n Simple_repeat Simple_repeat 2 52 0 1907 179 7 54 chr5 59116472 59116881 -140513269 - MLT1B LTR MaLR 0 390 1 829 233 41 50 chr5 59117211 59117430 -140512720 + MER20 DNA MER1_type 2 218 -1 2075 121 26 37 chr5 59117981 59118360 -140511790 + THE1C LTR MaLR 1 375 0 206 294 191 26 chr5 59118610 59118988 -140511162 + L2 LINE L2 2396 2835 -479 181 326 130 22 chr5 59119456 59119548 -140510602 - L2 LINE L2 -173 3099 2998 228 372 53 106 chr5 59120604 59120886 -140509264 + L2 LINE L2 2998 3264 -8 262 325 226 20 chr5 59121015 59121356 -140508794 + L2 LINE L2 2230 2640 -674 201 121 0 0 chr5 59122039 59122072 -140508078 + (T)n Simple_repeat Simple_repeat 1 33 0 198 230 103 46 chr5 59123212 59123299 -140506851 - L2 LINE L2 -62 3251 3160 182 88 0 29 chr5 59123326 59123360 -140506790 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 210 257 10 119 chr5 59123737 59123805 -140506345 - MIR SINE MIR -71 137 82 1842 144 16 33 chr5 59123805 59124110 -140506040 + AluSx SINE Alu 1 300 -12 210 257 10 119 chr5 59124110 59124142 -140506008 - MIR SINE MIR -126 82 48 188 207 121 35 chr5 59124120 59124178 -140505972 + MER5B DNA MER1_type 94 156 -22 * 306 375 67 43 chr5 59124219 59124726 -140505424 - L2 LINE L2 -181 3091 2572 275 247 43 0 chr5 59125767 59125860 -140504290 + (TA)n Simple_repeat Simple_repeat 1 97 0 1305 185 40 23 chr5 59126843 59127194 -140502956 - MER3 DNA MER1_type 0 2624 2268 545 238 0 0 chr5 59127218 59127340 -140502810 - MER3 DNA MER1_type -47 162 41 283 221 10 135 chr5 59127341 59127445 -140502705 + MIR SINE MIR 45 135 -127 238 299 134 45 chr5 59127509 59127733 -140502417 + L2 LINE L2 2422 2665 -649 202 360 62 31 chr5 59128150 59128375 -140501775 + L2 LINE L2 2810 3041 -231 187 346 125 0 chr5 59128441 59128577 -140501573 + MIR SINE MIR 35 187 -75 198 236 0 0 chr5 59128805 59128860 -140501290 + (TATATG)n Simple_repeat Simple_repeat 5 59 0 257 280 47 67 chr5 59128875 59129025 -140501125 - MIR SINE MIR -50 212 66 2626 48 0 3 chr5 59129273 59129583 -140500567 - AluY SINE Alu -2 309 1 1921 168 28 41 chr5 59130960 59131353 -140498797 + MLT1B LTR MaLR 3 390 0 299 316 146 44 chr5 59131614 59131908 -140498242 + HAL1 LINE L1 332 655 -1852 3234 119 87 35 chr5 59131932 59132213 -140497937 + L1MA3 LINE L1 5676 5941 -364 1892 156 23 0 chr5 59132213 59132514 -140497636 + AluSx SINE Alu 2 309 -3 3234 119 87 35 chr5 59132514 59132830 -140497320 + L1MA3 LINE L1 5941 6304 -1 225 156 67 89 chr5 59132850 59132940 -140497210 + HAL1 LINE L1 651 738 -1769 1935 177 100 8 chr5 59132964 59133354 -140496796 - MSTB LTR MaLR 0 426 1 8792 171 18 19 chr5 59133354 59133593 -140496557 - MSTB-int LTR MaLR 0 1651 1413 2135 126 3 7 chr5 59133593 59133894 -140496256 - AluSx SINE Alu -12 300 1 8792 171 18 19 chr5 59133894 59135307 -140494843 - MSTB-int LTR MaLR -238 1413 1 1856 184 104 13 chr5 59135307 59135681 -140494469 - MSTB LTR MaLR 0 426 19 502 297 55 41 chr5 59135691 59136034 -140494116 + HAL1 LINE L1 743 1090 -1417 2135 107 4 0 chr5 59136072 59136344 -140493806 + AluSg SINE Alu 2 274 -36 9638 142 44 13 chr5 59136374 59138077 -140492073 + L1MA3 LINE L1 3289 4936 -1369 1993 138 0 23 chr5 59138077 59138382 -140491768 - AluSx SINE Alu -14 298 1 9638 142 44 13 chr5 59138382 59139569 -140490581 + L1MA3 LINE L1 4936 6271 -34 360 64 0 0 chr5 59139569 59139616 -140490534 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 9638 142 44 13 chr5 59139616 59139653 -140490497 + L1MA3 LINE L1 6271 6305 0 631 231 96 28 chr5 59139671 59139953 -140490197 + HAL1 LINE L1 1978 2278 -229 226 264 0 66 chr5 59140310 59140401 -140489749 - 7SK RNA RNA -102 91 7 396 0 0 0 chr5 59141271 59141315 -140488835 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 1308 194 72 0 chr5 59141333 59141596 -140488554 - AluJo SINE Alu -30 282 1 972 106 67 31 chr5 59141597 59141826 -140488324 - Tigger4(Zombi) DNA MER2_type -121 2610 1 247 167 74 0 chr5 59141782 59141836 -140488314 + MER46A DNA MER2_type 100 157 -79 * 197 266 31 16 chr5 59141940 59142004 -140488146 + MIR SINE MIR 121 185 -77 42434 36 22 2 chr5 59142014 59148038 -140482112 - L1PA3 LINE L1 -2 6153 4 199 313 0 0 chr5 59148038 59148102 -140482048 + MIR SINE MIR 173 236 -26 486 253 74 25 chr5 59149968 59150170 -140479980 - MER102b DNA MER1_type -4 337 126 2982 80 31 58 chr5 59150202 59150650 -140479500 - MLT2A1 LTR ERVL -8 436 1 407 303 165 57 chr5 59150650 59151243 -140478907 - L2 LINE L2 -26 3287 2625 1816 133 1 3 chr5 59152589 59152619 -140477531 - L1ME LINE L1 -391 5779 5750 2839 107 30 0 chr5 59152619 59153051 -140477099 - L1MA4 LINE L1 -6 6294 5850 1816 133 1 3 chr5 59153051 59153309 -140476841 - L1ME LINE L1 -420 5750 5495 35 24 0 0 chr5 59153356 59153398 -140476752 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 59153969 59153990 -140476160 + AT_rich Low_complexity Low_complexity 1 21 0 3098 135 59 4 chr5 59154066 59154102 -140476048 - L1MA8 LINE L1 -461 5830 5797 237 33 0 0 chr5 59154102 59154132 -140476018 + (TG)n Simple_repeat Simple_repeat 2 31 0 3098 135 59 4 chr5 59154132 59154636 -140475514 - L1MA8 LINE L1 -494 5797 5260 2654 139 9 11 chr5 59154636 59155093 -140475057 + L1MA8 LINE L1 5823 6281 -10 258 32 0 0 chr5 59156042 59156073 -140474077 + (TCCC)n Simple_repeat Simple_repeat 2 32 0 544 200 39 15 chr5 59156097 59156227 -140473923 - FLAM_C SINE Alu 0 133 1 1038 243 176 49 chr5 59157291 59158052 -140472098 + HAL1 LINE L1 1521 2378 -129 612 268 174 43 chr5 59158185 59158484 -140471666 - MLT1I LTR MaLR -40 369 32 1759 162 0 55 chr5 59158553 59158881 -140471269 + AluJb SINE Alu 1 310 -2 27 0 0 0 chr5 59158896 59158923 -140471227 + AT_rich Low_complexity Low_complexity 1 27 0 259 240 30 10 chr5 59158939 59159039 -140471111 + (TA)n Simple_repeat Simple_repeat 2 103 0 648 318 127 36 chr5 59159061 59159527 -140470623 - L2 LINE L2 0 3313 2806 363 344 89 13 chr5 59159861 59160018 -140470132 - MIR SINE MIR -74 188 20 30 0 0 0 chr5 59161295 59161325 -140468825 + AT_rich Low_complexity Low_complexity 1 30 0 999 185 31 40 chr5 59161705 59161927 -140468223 - MER58A DNA MER1_type -3 221 2 189 262 0 0 chr5 59162309 59162370 -140467780 + T-rich Low_complexity Low_complexity 1 61 0 1128 173 5 0 chr5 59162715 59162923 -140467227 + L1PA16 LINE L1 5947 6155 -11 585 290 113 25 chr5 59162928 59163407 -140466743 + L1ME4a LINE L1 5599 6119 -2 317 91 0 18 chr5 59163748 59163803 -140466347 + (CA)n Simple_repeat Simple_repeat 2 55 0 21425 184 23 10 chr5 59164316 59165325 -140464825 - L1PA8 LINE L1 -2 6821 5826 2339 87 0 3 chr5 59165325 59165623 -140464527 - AluY SINE Alu -14 297 1 21425 184 23 10 chr5 59165623 59170209 -140459941 - L1PA8 LINE L1 -997 5826 1010 203 197 148 0 chr5 59170752 59170813 -140459337 - L2 LINE L2 -4 3309 3240 1307 107 112 0 chr5 59171609 59171815 -140458335 + MER30 DNA MER1_type 1 229 -1 1949 288 77 16 chr5 59171969 59172904 -140457246 - L2 LINE L2 0 3313 2322 610 261 78 54 chr5 59173069 59173364 -140456786 + LTR16C LTR ERVL 189 490 -1 270 330 20 0 chr5 59173364 59173464 -140456686 - L2 LINE L2 -989 2325 2224 343 228 114 8 chr5 59175307 59175430 -140454720 - L1ME4a LINE L1 -2 6119 5984 1695 167 3 26 chr5 59177263 59177568 -140452582 - AluJb SINE Alu 0 312 15 24 32 0 0 chr5 59177627 59177658 -140452492 + AT_rich Low_complexity Low_complexity 1 31 0 482 167 9 0 chr5 59177854 59177962 -140452188 + GA-rich Low_complexity Low_complexity 2 110 0 478 243 159 5 chr5 59179007 59179191 -140450959 + MIR SINE MIR 22 229 -33 407 331 11 39 chr5 59179296 59179474 -140450676 + MIR SINE MIR 12 184 -78 254 310 0 50 chr5 59180661 59180761 -140449389 - MIR SINE MIR -72 136 42 409 338 63 30 chr5 59180958 59181195 -140448955 - L2 LINE L2 -1 3271 3027 24 32 0 0 chr5 59183360 59183391 -140446759 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr5 59187110 59187147 -140443003 + AT_rich Low_complexity Low_complexity 1 37 0 219 240 20 0 chr5 59188235 59188285 -140441865 + (CA)n Simple_repeat Simple_repeat 2 52 0 291 190 30 50 chr5 59188993 59189093 -140441057 + GA-rich Low_complexity Low_complexity 5 102 0 301 339 6 30 chr5 59189129 59189294 -140440856 - MARNA DNA Mariner -412 174 14 534 292 20 33 chr5 59190583 59190808 -140439342 - MIR SINE MIR -16 246 20 504 274 118 10 chr5 59191448 59191652 -140438498 + MIR SINE MIR 3 228 -34 688 201 225 29 chr5 59191857 59192066 -140438084 + MIR SINE MIR 13 262 0 422 267 17 8 chr5 59192071 59192191 -140437959 + L2 LINE L2 3192 3312 -1 294 326 106 8 chr5 59192270 59192402 -140437748 - MIR3 SINE MIR -20 188 44 1370 193 55 11 chr5 59193673 59193948 -140436202 - AluJo SINE Alu -25 287 1 1378 205 37 39 chr5 59194279 59194660 -140435490 + MER63B DNA MER1_type 12 391 -45 317 277 10 50 chr5 59194660 59194761 -140435389 - L2 LINE L2 -65 3248 3152 1581 227 89 50 chr5 59196482 59197042 -140433108 - L1ME3A LINE L1 -90 6080 5499 1610 191 17 0 chr5 59198064 59198352 -140431798 + AluJb SINE Alu 5 297 -15 226 382 46 7 chr5 59198846 59198998 -140431152 + MIR3 SINE MIR 26 183 -25 1270 121 6 16 chr5 59199328 59199549 -140430601 + L1MA8 LINE L1 5893 6008 -166 1244 141 124 21 chr5 59199545 59199787 -140430363 + L1PA13 LINE L1 5897 6163 0 * 935 126 69 0 chr5 59199788 59199947 -140430203 + L1MA8 LINE L1 6115 6284 -7 514 270 135 11 chr5 59200683 59200868 -140429282 + MIR SINE MIR 36 243 -19 267 273 34 0 chr5 59201064 59201152 -140428998 + (TA)n Simple_repeat Simple_repeat 2 92 0 984 148 68 132 chr5 59201580 59201810 -140428340 + MER33 DNA MER1_type 1 194 -2391 3561 92 34 11 chr5 59201810 59202363 -140427787 + L1MA3 LINE L1 5739 6304 -1 984 148 68 132 chr5 59202363 59202487 -140427663 + MER33 DNA MER1_type 194 324 0 189 0 0 0 chr5 59202808 59202829 -140427321 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 327 219 106 20 chr5 59203148 59203299 -140426851 - MER103 DNA DNA -1 165 2 605 227 163 6 chr5 59205088 59205260 -140424890 + MIR SINE MIR 61 259 -3 814 68 17 8 chr5 59205303 59205420 -140424730 + AluY SINE Alu 178 295 -16 348 299 51 56 chr5 59206018 59206252 -140423898 - MIR SINE MIR -11 251 19 568 329 32 70 chr5 59207505 59207849 -140422301 - L2 LINE L2 -5 3267 2937 25 51 0 0 chr5 59207941 59207980 -140422170 + AT_rich Low_complexity Low_complexity 1 39 0 2257 117 3 0 chr5 59208202 59208510 -140421640 + AluSx SINE Alu 3 311 -1 21 36 0 0 chr5 59208610 59208638 -140421512 + AT_rich Low_complexity Low_complexity 1 28 0 24 53 0 0 chr5 59208831 59208869 -140421281 + AT_rich Low_complexity Low_complexity 1 38 0 230 266 82 101 chr5 59209849 59210056 -140420094 - MLT1J LTR MaLR -197 314 112 2030 181 11 11 chr5 59211183 59211559 -140418591 + MLT1B LTR MaLR 3 378 -12 403 261 108 8 chr5 59212956 59213086 -140417064 - L2 LINE L2 0 3313 3171 826 275 10 0 chr5 59214393 59214600 -140415550 - MIR SINE MIR -41 221 13 423 321 29 16 chr5 59214817 59214995 -140415155 - MIR SINE MIR -62 146 19 21 0 0 0 chr5 59215540 59215561 -140414589 + AT_rich Low_complexity Low_complexity 1 21 0 342 0 0 0 chr5 59215587 59215625 -140414525 + (TG)n Simple_repeat Simple_repeat 2 39 0 194 236 18 36 chr5 59215763 59215818 -140414332 + L2 LINE L2 3214 3267 -5 357 326 0 43 chr5 59215867 59216005 -140414145 - MIR3 SINE MIR -1 207 76 586 215 13 35 chr5 59216113 59216332 -140413818 - MER33 DNA MER1_type 0 324 13 3439 27 0 0 chr5 59216479 59216881 -140413269 - L1PA4 LINE L1 -2 6153 5752 1020 261 104 49 chr5 59218000 59218491 -140411659 - MLT1L LTR MaLR -97 518 1 801 369 64 21 chr5 59218606 59219284 -140410866 - L2 LINE L2 -213 3059 2357 286 74 37 0 chr5 59219984 59220038 -140410112 + (TA)n Simple_repeat Simple_repeat 2 57 0 589 341 78 9 chr5 59220055 59220272 -140409878 - MIR SINE MIR -10 252 21 21 57 0 0 chr5 59220544 59220579 -140409571 + AT_rich Low_complexity Low_complexity 1 35 0 1231 132 5 47 chr5 59220695 59220907 -140409243 - AluJo SINE Alu -13 299 97 237 272 141 0 chr5 59222283 59222375 -140407775 - L2 LINE L2 -46 3226 3122 199 305 18 104 chr5 59222502 59222666 -140407484 - L2 LINE L2 -219 3053 2904 338 260 42 0 chr5 59224251 59224347 -140405803 + L2 LINE L2 3214 3313 0 774 249 32 5 chr5 59224659 59224848 -140405302 + MIR SINE MIR 61 254 -8 27 103 0 0 chr5 59225674 59225771 -140404379 + AT_rich Low_complexity Low_complexity 1 97 0 242 188 78 16 chr5 59227247 59227311 -140402839 - MER116 DNA Mariner -5 75 8 956 77 0 0 chr5 59227677 59227807 -140402343 - AluSp/q SINE Alu 0 313 184 248 283 81 50 chr5 59228312 59228411 -140401739 + L3b LINE CR1 1351 1452 -131 255 269 19 19 chr5 59228681 59228789 -140401361 + L1ME4a LINE L1 5956 6063 -58 31 26 0 0 chr5 59229817 59229855 -140400295 + AT_rich Low_complexity Low_complexity 1 38 0 2299 101 7 7 chr5 59230003 59230311 -140399839 - AluSx SINE Alu -4 308 1 365 328 96 0 chr5 59230763 59230940 -140399210 - MIR SINE MIR -32 230 37 290 250 0 26 chr5 59230945 59231021 -140399129 - MIR3 SINE MIR -46 162 89 217 317 98 24 chr5 59231058 59231181 -140398969 - L3b LINE CR1 -144 1439 1308 603 293 29 6 chr5 59231190 59231364 -140398786 - MER5B DNA MER1_type 0 178 1 25 0 0 0 chr5 59231845 59231870 -140398280 + AT_rich Low_complexity Low_complexity 1 25 0 324 236 129 36 chr5 59233133 59233273 -140396877 - MIR SINE MIR -52 210 58 1549 230 19 25 chr5 59233292 59233661 -140396489 + MSTD LTR MaLR 34 396 0 855 229 40 10 chr5 59234035 59234236 -140395914 + MIR SINE MIR 46 252 -10 405 276 34 16 chr5 59234623 59234758 -140395392 - MIR SINE MIR -61 147 42 360 148 0 0 chr5 59236752 59236813 -140393337 + (TATG)n Simple_repeat Simple_repeat 4 64 0 627 217 0 16 chr5 59237698 59237827 -140392323 - FLAM_A SINE Alu -10 132 6 28 29 0 0 chr5 59237944 59237979 -140392171 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 59238101 59238129 -140392021 + AT_rich Low_complexity Low_complexity 1 28 0 180 111 0 0 chr5 59238263 59238290 -140391860 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 232 237 0 43 chr5 59238294 59238387 -140391763 - L1MC4 LINE L1 -1339 6703 6615 583 185 17 34 chr5 59238387 59238565 -140391585 + (CATA)n Simple_repeat Simple_repeat 1 175 0 375 309 0 0 chr5 59238537 59238748 -140391402 + (TA)n Simple_repeat Simple_repeat 1 211 0 * 312 309 0 0 chr5 59238726 59238810 -140391340 + (TATATG)n Simple_repeat Simple_repeat 3 86 0 * 363 310 0 0 chr5 59238812 59239133 -140391017 + (CATATA)n Simple_repeat Simple_repeat 1 321 0 239 158 53 53 chr5 59239148 59239224 -140390926 - L1MCa LINE L1 -4358 2068 1993 26 0 0 0 chr5 59239536 59239562 -140390588 + AT_rich Low_complexity Low_complexity 1 26 0 2454 65 0 7 chr5 59240474 59240780 -140389370 - AluY SINE Alu -7 304 1 21 36 0 0 chr5 59240790 59240818 -140389332 + AT_rich Low_complexity Low_complexity 1 28 0 824 182 0 8 chr5 59240825 59240957 -140389193 - FRAM SINE Alu -35 141 11 1954 155 9 29 chr5 59241007 59241348 -140388802 + THE1B LTR MaLR 31 364 0 455 146 15 0 chr5 59241403 59241501 -140388649 + L1MA8 LINE L1 5254 5358 -954 808 168 0 0 chr5 59241502 59241627 -140388523 + FLAM_C SINE Alu 1 125 -18 4971 136 32 34 chr5 59241634 59242065 -140388085 + L1MA8 LINE L1 5350 5780 -511 180 0 0 0 chr5 59242065 59242085 -140388065 + (CA)n Simple_repeat Simple_repeat 2 21 0 4971 136 32 34 chr5 59242085 59242596 -140387554 + L1MA8 LINE L1 5780 6290 -1 278 282 118 29 chr5 59243372 59243542 -140386608 - MIR SINE MIR -14 248 64 21 36 0 0 chr5 59243728 59243756 -140386394 + AT_rich Low_complexity Low_complexity 1 28 0 414 0 0 0 chr5 59244094 59244140 -140386010 + (CA)n Simple_repeat Simple_repeat 2 47 0 21 0 0 0 chr5 59245053 59245074 -140385076 + AT_rich Low_complexity Low_complexity 1 21 0 1771 184 3 16 chr5 59245341 59245646 -140384504 + AluJo SINE Alu 1 301 -11 23 54 0 0 chr5 59246201 59246238 -140383912 + AT_rich Low_complexity Low_complexity 1 37 0 1960 117 0 31 chr5 59246336 59246627 -140383523 + AluSx SINE Alu 21 302 -10 2003 155 0 0 chr5 59247630 59247926 -140382224 - AluJb SINE Alu -16 296 1 1136 235 49 13 chr5 59247968 59248412 -140381738 - MER119 DNA MER1_type 0 583 27 258 307 72 33 chr5 59250052 59250205 -140379945 + MIR SINE MIR 104 262 0 22 35 0 0 chr5 59251044 59251073 -140379077 + AT_rich Low_complexity Low_complexity 1 29 0 253 98 20 20 chr5 59251543 59251594 -140378556 + (TTC)n Simple_repeat Simple_repeat 3 53 0 1194 169 18 27 chr5 59251596 59251821 -140378329 - AluJo SINE Alu -8 304 82 414 0 0 0 chr5 59252473 59252519 -140377631 + (CA)n Simple_repeat Simple_repeat 1 46 0 239 347 53 42 chr5 59252558 59252748 -140377402 + L2 LINE L2 2564 2755 -559 330 26 0 0 chr5 59253990 59254029 -140376121 + (TG)n Simple_repeat Simple_repeat 2 40 0 202 360 6 32 chr5 59254867 59255042 -140375108 + L2 LINE L2 2550 2786 -528 266 268 74 0 chr5 59256034 59256128 -140374022 - MIR3 SINE MIR -29 179 78 2960 15 0 0 chr5 59257309 59257648 -140372502 + L1PA2 LINE L1 5817 6155 0 262 132 0 0 chr5 59258443 59258481 -140371669 + MER116 DNA Mariner 43 80 0 207 313 0 0 chr5 59258646 59258676 -140371474 + A-rich Low_complexity Low_complexity 1 30 -50 866 198 25 0 chr5 59258676 59258838 -140371312 + FRAM SINE Alu 1 166 0 207 313 0 0 chr5 59258838 59258887 -140371263 + A-rich Low_complexity Low_complexity 29 80 0 623 244 117 38 chr5 59259410 59259623 -140370527 - MIR SINE MIR -2 260 31 1905 168 0 0 chr5 59259790 59260082 -140370068 + AluJb SINE Alu 1 292 -20 486 321 59 12 chr5 59261152 59261376 -140368774 + MIR SINE MIR 34 262 0 385 239 71 18 chr5 59261452 59261565 -140368585 - 7SK RNA RNA -68 125 7 1375 178 58 44 chr5 59262444 59262719 -140367431 + AluJb SINE Alu 1 279 -33 417 39 0 0 chr5 59262719 59262770 -140367380 + (CA)n Simple_repeat Simple_repeat 1 51 0 1050 192 66 84 chr5 59263028 59263409 -140366741 + MLT1A2 LTR MaLR 1 374 0 2138 192 101 25 chr5 59263517 59264043 -140366107 - L1MB1 LINE L1 -1056 5090 4525 4922 147 28 29 chr5 59264053 59265106 -140365044 + L1MB1 LINE L1 5107 6166 -2 5551 123 8 19 chr5 59265678 59266864 -140363286 + L1PA15 LINE L1 4990 6156 -9 1034 280 51 38 chr5 59267024 59267689 -140362461 + L2 LINE L2 2639 3310 -3 350 205 0 13 chr5 59267940 59268018 -140362132 - MER69 DNA AcHobo 0 2526 2450 * 433 282 35 0 chr5 59268015 59268157 -140361993 - MER69 DNA AcHobo -2379 147 1 2119 76 43 0 chr5 59268250 59268527 -140361623 - AluSp SINE Alu -24 289 1 196 50 0 75 chr5 59268590 59268630 -140361520 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 653 273 175 14 chr5 59269719 59270074 -140360076 + MLT1J2 LTR MaLR 15 426 -24 5155 138 56 46 chr5 59270576 59271747 -140358403 + L1MA4A LINE L1 5107 6292 -11 276 290 18 121 chr5 59273764 59273988 -140356162 - MIR SINE MIR -22 240 40 764 220 11 11 chr5 59274450 59274627 -140355523 - L1PA16 LINE L1 -7 6159 5983 416 331 44 7 chr5 59274675 59274811 -140355339 + MIR3 SINE MIR 12 152 -56 315 323 62 25 chr5 59274814 59274975 -140355175 - MER5A DNA MER1_type -6 172 6 369 160 11 21 chr5 59275215 59275309 -140354841 + GA-rich Low_complexity Low_complexity 4 96 0 287 354 156 14 chr5 59275772 59275984 -140354166 - MIR SINE MIR -1 261 20 336 352 78 5 chr5 59276101 59276223 -140353927 + MIR SINE MIR 46 189 -73 351 0 0 0 chr5 59276223 59276262 -140353888 + (TG)n Simple_repeat Simple_repeat 1 39 0 336 352 78 5 chr5 59276262 59276332 -140353818 + MIR SINE MIR 189 252 -10 498 248 50 14 chr5 59276469 59276610 -140353540 + MIR SINE MIR 1 146 -116 505 267 149 23 chr5 59278168 59278389 -140351761 + MIR SINE MIR 3 251 -11 273 29 0 0 chr5 59279215 59279249 -140350901 + (CA)n Simple_repeat Simple_repeat 1 34 0 589 312 45 0 chr5 59279277 59279524 -140350626 + MIR SINE MIR 2 259 -3 222 304 25 38 chr5 59280428 59280507 -140349643 + L2 LINE L2 3232 3309 -4 686 202 0 0 chr5 59280550 59280664 -140349486 + FAM SINE Alu 1 114 -71 569 296 27 16 chr5 59281107 59281293 -140348857 - MIR SINE MIR -11 251 64 259 327 51 58 chr5 59281341 59281497 -140348653 + MER5A DNA MER1_type 35 189 0 259 163 23 0 chr5 59281747 59281790 -140348360 + MIR3 SINE MIR 116 159 -49 25 0 0 0 chr5 59281812 59281837 -140348313 + AT_rich Low_complexity Low_complexity 1 25 0 2460 76 0 0 chr5 59281889 59282191 -140347959 - AluSq SINE Alu -2 311 10 506 302 39 39 chr5 59282226 59282588 -140347562 + L1ME4a LINE L1 5554 5918 -203 1485 157 120 4 chr5 59282588 59282855 -140347295 + AluSg1 SINE Alu 1 298 -11 506 302 39 39 chr5 59282855 59282903 -140347247 + L1ME4a LINE L1 5917 5964 -157 318 322 0 0 chr5 59283012 59283102 -140347048 - L1MC4 LINE L1 -1339 6703 6614 301 293 0 0 chr5 59283058 59283140 -140347010 + L1MC4 LINE L1 6614 6695 -1347 * 216 0 0 0 chr5 59283140 59283164 -140346986 + (TG)n Simple_repeat Simple_repeat 2 25 0 204 250 0 0 chr5 59283203 59283251 -140346899 + (TA)n Simple_repeat Simple_repeat 2 49 0 * 237 271 17 0 chr5 59283222 59283281 -140346869 + (TG)n Simple_repeat Simple_repeat 1 60 0 26 0 0 0 chr5 59283360 59283386 -140346764 + AT_rich Low_complexity Low_complexity 1 26 0 267 200 0 0 chr5 59283402 59283462 -140346688 + L1ME4a LINE L1 6059 6118 -3 437 313 73 0 chr5 59284119 59284298 -140345852 + MIR SINE MIR 45 236 -26 199 93 47 0 chr5 59284435 59284478 -140345672 + (TA)n Simple_repeat Simple_repeat 1 45 0 252 0 0 0 chr5 59286483 59286511 -140343639 + (A)n Simple_repeat Simple_repeat 1 28 0 238 250 33 33 chr5 59286513 59286633 -140343517 - Charlie7 DNA MER1_type -53 2559 2440 866 278 122 29 chr5 59287539 59288274 -140341876 + L1ME4a LINE L1 5265 6068 -53 216 97 0 0 chr5 59288286 59288317 -140341833 + (TG)n Simple_repeat Simple_repeat 2 32 0 1118 195 80 23 chr5 59288320 59288582 -140341568 - AluJo SINE Alu -35 277 1 1483 178 45 51 chr5 59288649 59288963 -140341187 + AluJb SINE Alu 1 312 0 6379 121 10 2 chr5 59289103 59290629 -140339521 + L1PA14 LINE L1 4621 6159 -2 198 315 148 9 chr5 59290754 59290862 -140339288 + MIR SINE MIR 1 123 -139 1820 163 7 17 chr5 59290968 59291263 -140338887 - AluJb SINE Alu -16 296 5 209 192 0 58 chr5 59292303 59292355 -140337795 + (TGAA)n Simple_repeat Simple_repeat 1 49 0 221 163 23 0 chr5 59293047 59293090 -140337060 + CT-rich Low_complexity Low_complexity 2 45 0 2671 163 12 56 chr5 59293449 59294052 -140336098 + L1MB8 LINE L1 5592 6167 -11 240 248 67 38 chr5 59294089 59294194 -140335956 + L1MC4a LINE L1 5861 5968 -1840 460 290 127 5 chr5 59294306 59294527 -140335623 - L1MC4a LINE L1 -1948 5860 5613 325 220 22 22 chr5 59295259 59295350 -140334800 + L1MB8 LINE L1 6082 6172 -6 236 232 0 107 chr5 59295383 59295495 -140334655 + L1MC4a LINE L1 5862 5961 -1847 225 146 0 0 chr5 59296701 59296749 -140333401 + (CA)n Simple_repeat Simple_repeat 2 49 0 21 36 0 0 chr5 59296979 59297007 -140333143 + AT_rich Low_complexity Low_complexity 1 28 0 234 79 26 53 chr5 59297097 59297173 -140332977 + (TA)n Simple_repeat Simple_repeat 2 75 0 21 71 0 0 chr5 59297217 59297259 -140332891 + AT_rich Low_complexity Low_complexity 1 42 0 326 252 19 47 chr5 59297604 59297711 -140332439 - MIR SINE MIR 0 262 159 41 0 0 0 chr5 59300196 59300237 -140329913 + AT_rich Low_complexity Low_complexity 1 41 0 257 392 78 0 chr5 59300590 59300692 -140329458 + L2 LINE L2 3148 3257 -15 208 342 35 77 chr5 59301638 59301898 -140328252 - L2 LINE L2 -5 3267 3019 762 222 70 56 chr5 59302077 59302361 -140327789 + L1ME3A LINE L1 5813 6100 -70 376 197 152 23 chr5 59302607 59302739 -140327411 - MER117 DNA MER1_type -31 166 18 205 280 13 13 chr5 59304006 59304081 -140326069 - MIR SINE MIR -4 258 184 436 287 92 12 chr5 59304152 59304316 -140325834 + MIR SINE MIR 73 249 -13 920 176 33 0 chr5 59304556 59304709 -140325441 + FAM SINE Alu 1 158 -17 180 0 0 0 chr5 59304711 59304731 -140325419 + (TA)n Simple_repeat Simple_repeat 2 21 0 338 327 68 25 chr5 59306017 59306179 -140323971 + L3b LINE CR1 1219 1387 -196 33 85 0 0 chr5 59308204 59308286 -140321864 + AT_rich Low_complexity Low_complexity 1 82 0 237 348 22 0 chr5 59308360 59308449 -140321701 - MIR SINE MIR -59 149 59 382 297 174 5 chr5 59309255 59309450 -140320700 + MIR SINE MIR 21 248 -14 1954 140 3 10 chr5 59309479 59309779 -140320371 - AluSx SINE Alu -14 298 1 22 80 0 0 chr5 59310239 59310289 -140319861 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr5 59311158 59311182 -140318968 + AT_rich Low_complexity Low_complexity 1 24 0 231 173 0 19 chr5 59311776 59311828 -140318322 - L1MC4 LINE L1 -1340 6702 6652 23 0 0 0 chr5 59311862 59311885 -140318265 + AT_rich Low_complexity Low_complexity 1 23 0 216 97 0 0 chr5 59314558 59314589 -140315561 + (A)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr5 59315138 59315159 -140314991 + AT_rich Low_complexity Low_complexity 1 21 0 530 189 61 61 chr5 59317007 59317203 -140312947 + MER113 DNA MER1_type? 4 199 -322 363 121 0 0 chr5 59318216 59318274 -140311876 + (TG)n Simple_repeat Simple_repeat 1 58 0 29 47 0 0 chr5 59319028 59319071 -140311079 + AT_rich Low_complexity Low_complexity 1 43 0 1332 191 11 4 chr5 59319980 59320253 -140309897 - L1MB3 LINE L1 -2 6181 5907 2381 90 0 7 chr5 59320799 59321109 -140309041 + AluSq SINE Alu 1 308 -5 745 252 114 5 chr5 59321406 59321616 -140308534 + MIR SINE MIR 17 249 -13 26 30 0 0 chr5 59322241 59322274 -140307876 + AT_rich Low_complexity Low_complexity 1 33 0 284 278 31 86 chr5 59322316 59322478 -140307672 + MIR SINE MIR 50 202 -60 587 27 0 7 chr5 59322834 59322922 -140307228 - L1P LINE L1 -735 5419 5335 6693 11 0 0 chr5 59322922 59323666 -140306484 + L1PA2 LINE L1 5404 6155 0 190 300 67 0 chr5 59323668 59323728 -140306422 + L2 LINE L2 3168 3231 -41 618 274 18 12 chr5 59324653 59324821 -140305329 - MIR SINE MIR -12 250 82 518 219 32 8 chr5 59325129 59325252 -140304898 - L1MB5 LINE L1 -151 6023 5898 483 88 168 88 chr5 59325390 59325503 -140304647 + L1MA3 LINE L1 12 133 -7432 * 15168 119 25 21 chr5 59325500 59327877 -140302273 + L1MA3 LINE L1 1099 3484 -4081 6312 196 64 8 chr5 59327866 59330159 -140299991 + L1MA3 LINE L1 5296 7724 0 * 286 337 71 0 chr5 59332705 59332803 -140297347 - MER91C DNA MER1_type 0 140 36 498 284 169 18 chr5 59332930 59333155 -140296995 + MIR SINE MIR 2 260 -2 23 0 0 0 chr5 59333691 59333714 -140296436 + AT_rich Low_complexity Low_complexity 1 23 0 34 55 0 0 chr5 59334668 59334723 -140295427 + AT_rich Low_complexity Low_complexity 1 55 0 254 242 89 121 chr5 59334962 59335119 -140295031 - MIR SINE MIR -6 256 105 234 0 0 0 chr5 59335213 59335239 -140294911 + (CA)n Simple_repeat Simple_repeat 2 27 0 385 283 35 9 chr5 59336024 59336137 -140294013 + L2 LINE L2 3182 3297 -16 189 0 0 0 chr5 59336142 59336163 -140293987 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 249 307 102 63 chr5 59336390 59336554 -140293596 + L3 LINE CR1 1353 1528 -49 2040 146 7 0 chr5 59336554 59336855 -140293295 - AluSx SINE Alu -9 303 1 249 307 102 63 chr5 59336855 59336895 -140293255 + L3 LINE CR1 1528 1565 -12 1114 288 73 18 chr5 59337591 59337973 -140292177 + LTR16C LTR ERVL 89 491 0 2312 97 0 7 chr5 59338270 59338578 -140291572 + AluSx SINE Alu 3 308 -4 2939 159 44 26 chr5 59339027 59339567 -140290583 - MER21A LTR ERV1 -6 925 376 1193 122 195 0 chr5 59339572 59339793 -140290357 - MER21A LTR ERV1 -667 264 1 1025 277 25 112 chr5 59340183 59340833 -140289317 + MER50 LTR ERV1 9 594 -140 * 15891 208 10 13 chr5 59340824 59344970 -140285180 - L1PB1 LINE L1 -4 6863 2755 9505 34 41 3 chr5 59344970 59346782 -140283368 + L1PA3 LINE L1 4311 6155 0 15891 208 10 13 chr5 59346782 59347076 -140283074 - L1PB1 LINE L1 -4112 2755 2462 3462 227 122 25 chr5 59347164 59348222 -140281928 - L1PB1 LINE L1 -5700 1163 3 1553 278 58 17 chr5 59348312 59348794 -140281356 + MER50-int LTR ERV1 2 503 -6702 2339 294 42 37 chr5 59348815 59349643 -140280507 + MER50-int LTR ERV1 685 1516 -5689 1832 131 96 0 chr5 59349685 59349967 -140280183 + AluSx SINE Alu 1 309 -3 659 298 126 31 chr5 59349967 59350300 -140279850 + MER50-int LTR ERV1 1534 1821 -5270 3420 255 49 28 chr5 59350583 59352096 -140278054 + MER50-int LTR ERV1 2246 4036 -844 709 287 63 55 chr5 59352814 59353309 -140276841 + MER66-int LTR ERV1 5945 6443 -233 1557 180 14 37 chr5 59353332 59353683 -140276467 + MER61C LTR ERV1 1 434 0 966 226 20 0 chr5 59353715 59353914 -140276236 + MER50-int LTR ERV1 6994 7196 -9 1791 264 116 29 chr5 59353916 59354570 -140275580 + MER50 LTR ERV1 1 711 -23 324 260 13 0 chr5 59356727 59356804 -140273346 - MIR SINE MIR -108 154 77 315 0 0 0 chr5 59357601 59357636 -140272514 + (TG)n Simple_repeat Simple_repeat 2 36 0 203 273 0 0 chr5 59358596 59358640 -140271510 + (TG)n Simple_repeat Simple_repeat 2 45 0 188 80 0 0 chr5 59358740 59358765 -140271385 + MIR SINE MIR 210 234 -28 249 302 0 0 chr5 59359216 59359279 -140270871 + CT-rich Low_complexity Low_complexity 4 66 0 195 284 60 15 chr5 59360484 59360551 -140269599 + MIR SINE MIR 54 123 -85 641 193 188 11 chr5 59462658 59462834 -140167316 + MER97c DNA MER1_type? 28 234 -856 1318 173 89 68 chr5 59462846 59463274 -140166876 + LTR48 LTR ERV1 1 453 -246 1999 132 84 0 chr5 59463274 59463630 -140166520 + LTR24C LTR ERV1 248 633 -2 235 161 0 107 chr5 59463685 59463741 -140166409 + Alu SINE Alu 121 170 -133 5823 108 48 2 chr5 59463869 59464906 -140165244 + L1P LINE L1 4237 5325 -829 1105 98 18 0 chr5 59465069 59465233 -140164917 + MLT2A2 LTR ERVL 287 453 0 511 328 45 11 chr5 59465850 59466027 -140164123 + MER5A DNA MER1_type 7 189 0 375 259 28 0 chr5 59466066 59466174 -140163976 + L1ME LINE L1 5676 5786 -335 2428 200 43 26 chr5 59466274 59466369 -140163781 + L1 LINE L1 4608 4700 -1446 2351 104 0 0 chr5 59466369 59466676 -140163474 + AluSg1 SINE Alu 1 307 -2 2428 200 43 26 chr5 59466676 59467204 -140162946 + L1 LINE L1 4700 5242 -904 1111 161 19 28 chr5 59467204 59467415 -140162735 + MER2 DNA MER2_type 2 210 -135 4178 174 42 14 chr5 59467774 59468660 -140161490 + L1 LINE L1 3543 4453 -1693 230 167 0 0 chr5 59468792 59468834 -140161316 + L2 LINE L2 3262 3303 -10 215 250 7 146 chr5 59468841 59468985 -140161165 + L3 LINE CR1 1445 1568 -9 7251 89 13 1 chr5 59471814 59473062 -140157088 - L1P3 LINE L1 -571 5583 4323 1616 266 49 43 chr5 59473195 59474087 -140156063 - L1 LINE L1 -3844 3721 2826 408 227 62 0 chr5 59474093 59474190 -140155960 - L1 LINE L1 -5076 2410 2308 271 323 37 69 chr5 59474197 59474386 -140155764 - L1 LINE L1 -5424 2062 1880 5347 200 31 26 chr5 59474581 59475871 -140154279 - L1 LINE L1 -1548 4598 3303 14655 107 4 61 chr5 59475974 59478387 -140151763 - L1P LINE L1 -3872 2274 1 2115 88 0 16 chr5 59478389 59478709 -140151441 + L1P LINE L1 1846 2160 -3986 4959 170 34 15 chr5 59478876 59479736 -140150414 + L1MA9 LINE L1 5283 6166 -146 240 111 0 0 chr5 59479736 59479772 -140150378 + (CA)n Simple_repeat Simple_repeat 1 36 0 4959 170 34 15 chr5 59479772 59479922 -140150228 + L1MA9 LINE L1 6166 6312 0 1004 236 84 54 chr5 59479949 59480502 -140149648 + L1MC5 LINE L1 7301 7875 -86 418 97 83 14 chr5 59480502 59480574 -140149576 + MADE1 DNA Mariner 1 77 -3 1004 236 84 54 chr5 59480574 59480613 -140149537 + L1MC5 LINE L1 7875 7911 -50 779 371 98 6 chr5 59481015 59481527 -140148623 - L3 LINE CR1 -779 798 240 556 208 115 47 chr5 59481538 59481730 -140148420 - L2 LINE L2 0 3313 3109 1845 199 22 5 chr5 59481741 59482108 -140148042 - MER95 LTR ERV -9 422 50 326 289 90 43 chr5 59482233 59482444 -140147706 - HAL1 LINE L1 -1497 1010 790 347 155 0 0 chr5 59483228 59483286 -140146864 - L1MC2 LINE L1 -241 6103 6046 300 27 0 0 chr5 59483308 59483345 -140146805 + (CA)n Simple_repeat Simple_repeat 2 38 0 23 0 0 0 chr5 59483516 59483539 -140146611 + AT_rich Low_complexity Low_complexity 1 23 0 7595 57 4 5 chr5 59484480 59485888 -140144262 + L1P LINE L1 352 1886 -4260 4639 137 26 2 chr5 59485990 59487046 -140143104 + L1PA13 LINE L1 5004 6151 -12 257 242 89 8 chr5 59487338 59487462 -140142688 + L1 LINE L1 3029 3162 -2984 24 0 0 0 chr5 59488357 59488381 -140141769 + AT_rich Low_complexity Low_complexity 1 24 0 501 215 30 52 chr5 59488390 59488525 -140141625 - FLAM_C SINE Alu 0 133 2 556 250 165 27 chr5 59489539 59489763 -140140387 + MIR SINE MIR 7 261 -1 207 0 0 0 chr5 59490101 59490124 -140140026 + (TG)n Simple_repeat Simple_repeat 2 24 0 805 133 28 0 chr5 59491005 59491148 -140139002 + L1MA4 LINE L1 6019 6165 -135 * 2664 193 43 2 chr5 59491147 59491734 -140138416 - L1 LINE L1 -1518 4628 4018 1519 233 34 9 chr5 59491754 59492197 -140137953 - L1M4c LINE L1 -4611 1773 1320 250 235 61 35 chr5 59492357 59492472 -140137678 + L1M LINE L1 5277 5394 -2414 890 146 55 0 chr5 59492714 59492879 -140137271 - MER7A DNA MER2_type -174 172 1 347 260 143 41 chr5 59493310 59493506 -140136644 + MIR SINE MIR 41 256 -6 440 309 80 6 chr5 59493637 59493799 -140136351 + MIR SINE MIR 89 262 0 353 343 124 9 chr5 59494119 59494285 -140135865 - MIR SINE MIR 0 262 60 552 207 18 9 chr5 59494285 59494396 -140135754 - MER81 DNA DNA -2 112 1 353 343 124 9 chr5 59494396 59494462 -140135688 - MIR SINE MIR -202 60 3 235 392 0 0 chr5 59494705 59494807 -140135343 - MIR3 SINE MIR -3 205 104 421 277 84 0 chr5 59495314 59495433 -140134717 + MIR SINE MIR 94 222 -40 440 236 38 0 chr5 59496745 59496851 -140133299 + MER58B DNA MER1_type 229 338 -3 261 374 10 10 chr5 59499210 59499309 -140130841 - L2 LINE L2 -36 3236 3138 22 56 0 0 chr5 59499567 59499603 -140130547 + AT_rich Low_complexity Low_complexity 1 36 0 4613 38 28 0 chr5 59499702 59500280 -140129870 - L1P LINE L1 -902 5244 4651 771 53 35 0 chr5 59500279 59500393 -140129757 + L1P LINE L1 5167 5284 -862 * 559 339 25 62 chr5 59501257 59501614 -140128536 + L1M3d LINE L1 462 805 -5498 2753 236 76 25 chr5 59501804 59502930 -140127220 + L1M3d LINE L1 777 1856 -4522 25 0 0 0 chr5 59502961 59502986 -140127164 + AT_rich Low_complexity Low_complexity 1 25 0 906 218 56 9 chr5 59503396 59503612 -140126538 + MER68 LTR ERV1 337 562 0 248 197 0 15 chr5 59505518 59505584 -140124566 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 346 213 138 0 chr5 59505584 59505664 -140124486 - Tigger3(Golem) DNA MER2_type -1 3028 2938 6434 67 6 14 chr5 59505805 59506981 -140123169 + L1PA7 LINE L1 4984 6150 -4 27 0 0 0 chr5 59507494 59507521 -140122629 + AT_rich Low_complexity Low_complexity 1 27 0 623 221 144 14 chr5 59507902 59508100 -140122050 - MIR SINE MIR -40 222 6 23232 30 3 1 chr5 59508750 59511580 -140118570 - L1P LINE L1 -1100 5046 2213 282 95 0 0 chr5 59511722 59511764 -140118386 + (GGCTG)n Simple_repeat Simple_repeat 5 46 0 271 105 0 0 chr5 59511842 59511880 -140118270 - MLT2D LTR ERVL -10 404 367 6125 142 32 56 chr5 59511946 59513151 -140116999 + Tigger1 DNA MER2_type 2 1177 -1241 6906 146 13 4 chr5 59513154 59514319 -140115831 - L1P LINE L1 -3208 2938 1764 649 91 0 10 chr5 59514315 59514414 -140115736 + L1P LINE L1 5331 5428 -733 * 288 113 65 32 chr5 59514907 59514969 -140115181 - MER4A LTR ERV1 -600 64 1 278 210 32 0 chr5 59514970 59515032 -140115118 + L1PB4 LINE L1 6038 6101 -55 602 188 8 0 chr5 59515744 59515861 -140114289 - L1PB4 LINE L1 -2 6154 6037 668 111 0 10 chr5 59515862 59515961 -140114189 + MER4A LTR ERV1 1 98 -566 1431 157 19 73 chr5 59515961 59516326 -140113824 + MER4A LTR ERV1 261 664 0 1805 32 71 0 chr5 59516810 59517093 -140113057 + AluYb8 SINE Alu 4 306 -12 247 24 24 24 chr5 59517543 59517584 -140112566 + (TG)n Simple_repeat Simple_repeat 1 41 0 21 36 0 0 chr5 59517608 59517636 -140112514 + AT_rich Low_complexity Low_complexity 1 28 0 7296 40 3 0 chr5 59517726 59518611 -140111539 - L1PA3 LINE L1 -5 6150 5263 330 26 0 0 chr5 59518874 59518913 -140111237 + (CAT)n Simple_repeat Simple_repeat 2 40 0 4325 162 12 26 chr5 59519836 59520656 -140109494 - L1MB1 LINE L1 -5 6163 5355 327 244 167 67 chr5 59520761 59521060 -140109090 + L1ME4a LINE L1 5777 6105 -16 22 0 0 0 chr5 59521379 59521401 -140108749 + AT_rich Low_complexity Low_complexity 1 22 0 314 239 57 23 chr5 59521651 59521739 -140108411 + L1MC4 LINE L1 6615 6705 -1337 276 264 14 0 chr5 59521775 59521847 -140108303 + MLT1J2 LTR MaLR 43 115 -335 461 296 38 19 chr5 59521988 59522147 -140108003 + MLT1J2 LTR MaLR 263 424 -26 285 364 85 23 chr5 59522227 59522356 -140107794 - L2 LINE L2 -15 3257 3121 2388 99 3 3 chr5 59522652 59522965 -140107185 - AluSq SINE Alu 0 313 1 269 236 14 28 chr5 59523167 59523239 -140106911 + L2 LINE L2 3201 3271 -1 10488 131 9 9 chr5 59525161 59527585 -140102565 + L1PA8A LINE L1 3703 6131 0 567 203 0 8 chr5 59527586 59527714 -140102436 + L1 LINE L1 2922 3048 -3098 3698 166 19 5 chr5 59527889 59528523 -140101627 + L1PA13 LINE L1 1 643 -6144 574 199 41 48 chr5 59529063 59529209 -140100941 - LTR8 LTR ERV1 -546 145 1 940 25 25 0 chr5 59529430 59529552 -140100598 + (TTTC)n Simple_repeat Simple_repeat 3 127 0 9596 113 17 1 chr5 59529552 59531789 -140098361 - L1PA8 LINE L1 -19 6153 3897 1194 178 141 80 chr5 59531817 59532243 -140097907 - LTR47A LTR ERVL 0 452 1 263 260 87 58 chr5 59532475 59532683 -140097467 - HAL1 LINE L1 -1504 1003 790 1267 145 62 47 chr5 59533316 59533592 -140096558 - L1PA13 LINE L1 -1196 5601 5322 12210 208 18 19 chr5 59533605 59536767 -140093383 - L1PA13 LINE L1 -1980 4817 1646 2292 92 0 0 chr5 59536767 59537060 -140093090 - AluY SINE Alu -18 293 1 12210 208 18 19 chr5 59537060 59537946 -140092204 - L1PA13 LINE L1 -5151 1646 760 2415 244 65 56 chr5 59538112 59539520 -140090630 - L1M1 LINE L1 -4137 3428 2041 302 169 17 0 chr5 59540953 59541012 -140089138 - MLT1K LTR MaLR -3 585 526 183 264 0 0 chr5 59542342 59542395 -140087755 + (CA)n Simple_repeat Simple_repeat 1 53 0 189 94 0 0 chr5 59543140 59543172 -140086978 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 399 330 123 53 chr5 59543564 59544019 -140086131 - L2 LINE L2 0 3313 2827 488 277 19 19 chr5 59544023 59544182 -140085968 + MLT1I LTR MaLR 1 159 -250 1694 195 22 32 chr5 59544294 59544663 -140085487 - MLT1A1 LTR MaLR 0 365 1 541 118 49 39 chr5 59544944 59545046 -140085104 + L1P LINE L1 1758 1860 -4286 1135 152 0 54 chr5 59545052 59545367 -140084783 + L1P LINE L1 2814 3111 -3035 395 312 41 41 chr5 59546815 59546872 -140083278 + MLT1I LTR MaLR 185 241 -314 1759 74 13 4 chr5 59546872 59547103 -140083047 + AluSc SINE Alu 70 302 -7 395 312 41 41 chr5 59547103 59547314 -140082836 + MLT1I LTR MaLR 240 453 -102 406 321 60 23 chr5 59548316 59548534 -140081616 + MLT1H LTR MaLR 75 300 -249 1438 200 57 33 chr5 59548536 59548871 -140081279 + MLT2D LTR ERVL 1 343 -71 885 82 0 0 chr5 59548871 59548981 -140081169 - AluY SINE Alu -11 300 191 318 26 0 0 chr5 59549010 59549049 -140081101 + (TG)n Simple_repeat Simple_repeat 2 40 0 6708 138 54 5 chr5 59549076 59550265 -140079885 - Tigger1 DNA MER2_type 0 2418 1172 5804 83 8 1 chr5 59550270 59551097 -140079053 - L1PA10 LINE L1 -5 6163 5331 2288 147 35 10 chr5 59551093 59551575 -140078575 + L1P LINE L1 1764 2257 -3889 * 565 245 21 11 chr5 59551691 59551879 -140078271 - L1M4c LINE L1 -4875 1509 1320 1178 262 76 58 chr5 59552048 59552917 -140077233 + L1MC4a LINE L1 5283 6167 -1641 274 206 0 41 chr5 59552924 59552997 -140077153 + GA-rich Low_complexity Low_complexity 4 73 0 23 0 0 0 chr5 59554358 59554381 -140075769 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 59554587 59554610 -140075540 + AT_rich Low_complexity Low_complexity 1 23 0 186 118 0 0 chr5 59554713 59554747 -140075403 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 506 140 37 19 chr5 59554754 59554861 -140075289 - L1PA16 LINE L1 0 6166 6058 207 209 0 0 chr5 59555467 59555510 -140074640 + A-rich Low_complexity Low_complexity 1 43 0 8640 67 8 6 chr5 59556374 59557571 -140072579 + L1P LINE L1 2 1200 -4946 1001 194 60 10 chr5 59557673 59558068 -140072082 + L1MCa LINE L1 1448 1950 -4476 11487 110 13 18 chr5 59558080 59560252 -140069898 - L1P3 LINE L1 -4288 2173 3 28 29 0 0 chr5 59562120 59562155 -140067995 + AT_rich Low_complexity Low_complexity 1 35 0 7548 28 14 0 chr5 59562155 59563461 -140066689 - L1PA3 LINE L1 0 6155 4841 2680 82 0 3 chr5 59563561 59563916 -140066234 + L1PA7 LINE L1 5790 6143 -11 22 70 0 0 chr5 59563921 59563964 -140066186 + AT_rich Low_complexity Low_complexity 1 43 0 1231 208 104 81 chr5 59564107 59564549 -140065601 - MLT1C LTR MaLR -13 454 3 280 265 69 59 chr5 59564789 59564891 -140065259 - MIR SINE MIR -135 127 25 251 234 36 27 chr5 59564957 59565068 -140065082 - L1ME4a LINE L1 -3 6118 6007 24 53 0 0 chr5 59565094 59565132 -140065018 + AT_rich Low_complexity Low_complexity 1 38 0 28 29 0 0 chr5 59565231 59565266 -140064884 + AT_rich Low_complexity Low_complexity 1 35 0 5148 155 45 11 chr5 59566386 59566894 -140063256 - L1MA4 LINE L1 -4 6296 5807 2648 29 7 0 chr5 59566894 59567201 -140062949 - AluY SINE Alu -2 309 1 5148 155 45 11 chr5 59567201 59567890 -140062260 - L1MA4 LINE L1 -493 5807 5069 * 8489 184 23 17 chr5 59567889 59569882 -140060268 - L1MA4 LINE L1 -1609 4537 2532 755 198 38 73 chr5 59569883 59570171 -140059979 - L1MA4 LINE L1 -3753 2393 2116 917 85 43 0 chr5 59570297 59570438 -140059712 - AluSq/x SINE Alu -165 147 1 1863 204 114 30 chr5 59570717 59571183 -140058967 + MLT1D LTR MaLR 1 505 0 355 270 112 7 chr5 59572659 59572811 -140057339 - MIR SINE MIR -3 259 92 257 125 0 21 chr5 59573593 59573641 -140056509 + (TC)n Simple_repeat Simple_repeat 2 48 0 366 292 6 18 chr5 59574390 59574561 -140055589 + L1M4 LINE L1 4497 4665 -1481 314 149 15 0 chr5 59574628 59574695 -140055455 - L1PA14 LINE L1 -3 6158 6091 2828 16 0 0 chr5 59574907 59575222 -140054928 - AluYb8 SINE Alu -3 315 1 1089 158 39 72 chr5 59575708 59576065 -140054085 - MER4A LTR ERV1 0 664 261 554 104 21 10 chr5 59576065 59576161 -140053989 - MER4A LTR ERV1 -566 98 2 496 172 25 41 chr5 59576162 59576284 -140053866 + L1PB4 LINE L1 6037 6156 0 237 358 158 0 chr5 59576777 59576942 -140053208 - L2 LINE L2 -559 2755 2565 335 215 0 0 chr5 59576987 59577052 -140053098 - L1PB4 LINE L1 -55 6101 6037 331 154 0 15 chr5 59577053 59577118 -140053032 + MER4A LTR ERV1 1 64 -600 633 327 76 40 chr5 59577617 59577838 -140052312 - L2 LINE L2 0 3313 3101 2410 154 20 14 chr5 59577838 59578280 -140051870 + L1PA16 LINE L1 5717 6161 -5 633 327 76 40 chr5 59578280 59578507 -140051643 - L2 LINE L2 -212 3101 2849 434 331 13 7 chr5 59578537 59578691 -140051459 - L2 LINE L2 -536 2778 2624 401 188 0 0 chr5 59579447 59579527 -140050623 - AluJ/FRAM SINE Alu -10 302 223 24 0 0 0 chr5 59579753 59579777 -140050373 + AT_rich Low_complexity Low_complexity 1 24 0 276 324 72 0 chr5 59579867 59579978 -140050172 + L2 LINE L2 3195 3313 0 363 344 89 13 chr5 59681168 59681325 -139948825 + MIR SINE MIR 20 188 -74 648 318 127 36 chr5 59681660 59682126 -139948024 + L2 LINE L2 2806 3313 0 259 240 30 10 chr5 59682148 59682248 -139947902 + (TA)n Simple_repeat Simple_repeat 2 103 0 27 0 0 0 chr5 59682264 59682291 -139947859 + AT_rich Low_complexity Low_complexity 1 27 0 1759 162 0 55 chr5 59682306 59682634 -139947516 - AluJb SINE Alu -2 310 1 612 268 174 43 chr5 59682703 59683002 -139947148 + MLT1I LTR MaLR 32 369 -40 1038 243 176 49 chr5 59683135 59683896 -139946254 - HAL1 LINE L1 -129 2378 1521 544 200 39 15 chr5 59684959 59685089 -139945061 + FLAM_C SINE Alu 1 133 0 258 32 0 0 chr5 59685113 59685144 -139945006 + (GGGA)n Simple_repeat Simple_repeat 2 32 0 2654 139 9 11 chr5 59686097 59686557 -139943593 - L1MA8 LINE L1 -10 6281 5823 3063 136 60 4 chr5 59686557 59687058 -139943092 + L1MA8 LINE L1 5263 5797 -494 237 33 0 0 chr5 59687058 59687088 -139943062 + (CA)n Simple_repeat Simple_repeat 2 31 0 3063 136 60 4 chr5 59687088 59687124 -139943026 + L1MA8 LINE L1 5797 5830 -461 21 0 0 0 chr5 59687200 59687221 -139942929 + AT_rich Low_complexity Low_complexity 1 21 0 35 24 0 0 chr5 59687792 59687834 -139942316 + AT_rich Low_complexity Low_complexity 1 42 0 1816 133 1 3 chr5 59687881 59688139 -139942011 + L1ME LINE L1 5495 5750 -420 2839 107 30 0 chr5 59688139 59688571 -139941579 + L1MA4 LINE L1 5850 6294 -6 1816 133 1 3 chr5 59688571 59688601 -139941549 + L1ME LINE L1 5750 5779 -391 407 303 165 57 chr5 59689947 59690540 -139939610 + L2 LINE L2 2625 3287 -26 2982 80 31 58 chr5 59690540 59690988 -139939162 + MLT2A1 LTR ERVL 1 436 -8 486 253 74 25 chr5 59691020 59691222 -139938928 + MER102a DNA MER1_type 115 326 -4 199 313 0 0 chr5 59693088 59693152 -139936998 - MIR SINE MIR -26 236 173 38703 35 18 2 chr5 59693152 59699176 -139930974 + L1PA3 LINE L1 4 6153 -2 186 254 48 16 chr5 59699186 59699249 -139930901 - MIR SINE MIR -77 185 121 972 104 69 31 chr5 59699363 59699591 -139930559 + Tigger4(Zombi) DNA MER2_type 1 2610 -121 1308 194 72 0 chr5 59699592 59699855 -139930295 + AluJo SINE Alu 1 282 -30 396 0 0 0 chr5 59699873 59699917 -139930233 + (TCTA)n Simple_repeat Simple_repeat 4 47 0 226 264 0 66 chr5 59700787 59700878 -139929272 + 7SK RNA RNA 7 91 -102 631 231 96 28 chr5 59701235 59701517 -139928633 - HAL1 LINE L1 -229 2278 1978 10524 142 42 13 chr5 59701535 59701572 -139928578 - L1MA3 LINE L1 0 6305 6271 360 64 0 0 chr5 59701572 59701619 -139928531 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 10524 142 42 13 chr5 59701619 59702806 -139927344 - L1MA3 LINE L1 -34 6271 5120 1993 138 0 23 chr5 59702806 59703111 -139927039 + AluSx SINE Alu 1 298 -14 10524 142 42 13 chr5 59703111 59704814 -139925336 - L1MA3 LINE L1 -1185 5120 3289 2135 107 4 0 chr5 59704844 59705116 -139925034 - AluSg SINE Alu -36 274 2 502 297 55 41 chr5 59705154 59705497 -139924653 - HAL1 LINE L1 -1417 1090 743 1856 184 104 13 chr5 59705507 59705881 -139924269 + MSTB LTR MaLR 19 426 0 8792 171 18 19 chr5 59705881 59707294 -139922856 + MSTB-int LTR MaLR 1 1413 -238 2135 126 3 7 chr5 59707294 59707595 -139922555 + AluSx SINE Alu 1 300 -12 8792 171 18 19 chr5 59707595 59707834 -139922316 + MSTB-int LTR MaLR 1413 1651 0 1935 177 100 8 chr5 59707834 59708224 -139921926 + MSTB LTR MaLR 1 426 0 225 156 67 89 chr5 59708248 59708338 -139921812 - HAL1 LINE L1 -1769 738 651 3234 119 87 35 chr5 59708358 59708674 -139921476 - L1MA3 LINE L1 -1 6304 6006 1892 156 23 0 chr5 59708674 59708975 -139921175 - AluSx SINE Alu -3 309 2 3234 119 87 35 chr5 59708975 59709256 -139920894 - L1MA3 LINE L1 -299 6006 5676 299 316 146 44 chr5 59709280 59709574 -139920576 - HAL1 LINE L1 -1852 655 332 1921 168 28 41 chr5 59709835 59710228 -139919922 - MLT1B LTR MaLR 0 390 3 2626 48 0 3 chr5 59711605 59711915 -139918235 + AluY SINE Alu 1 309 -2 257 280 47 67 chr5 59712163 59712313 -139917837 + MIR SINE MIR 66 212 -50 198 236 0 0 chr5 59712328 59712383 -139917767 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 187 346 125 0 chr5 59712611 59712747 -139917403 - MIR SINE MIR -75 187 35 202 360 62 31 chr5 59712813 59713038 -139917112 - L2 LINE L2 -231 3041 2810 238 299 134 45 chr5 59713455 59713679 -139916471 - L2 LINE L2 -649 2665 2422 283 221 10 135 chr5 59713743 59713847 -139916303 - MIR SINE MIR -127 135 45 545 238 0 0 chr5 59713848 59713970 -139916180 + MER3 DNA MER1_type 41 162 -47 1305 185 40 23 chr5 59713994 59714345 -139915805 + MER3 DNA MER1_type 2268 2624 0 249 245 53 0 chr5 59715330 59715424 -139914726 + (TA)n Simple_repeat Simple_repeat 2 100 0 306 375 67 43 chr5 59716481 59716988 -139913162 + L2 LINE L2 2572 3091 -181 188 207 121 35 chr5 59717029 59717087 -139913063 - MER5B DNA MER1_type -22 156 94 * 210 257 10 119 chr5 59717065 59717097 -139913053 + MIR SINE MIR 48 82 -126 1842 144 16 33 chr5 59717097 59717402 -139912748 - AluSx SINE Alu -12 300 1 210 257 10 119 chr5 59717402 59717470 -139912680 + MIR SINE MIR 82 137 -71 182 88 0 29 chr5 59717847 59717881 -139912269 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 198 230 103 46 chr5 59717908 59717995 -139912155 + L2 LINE L2 3160 3251 -62 201 121 0 0 chr5 59719099 59719132 -139911018 + (A)n Simple_repeat Simple_repeat 1 33 0 262 325 226 20 chr5 59719815 59720156 -139909994 - L2 LINE L2 -674 2640 2230 228 372 53 106 chr5 59720285 59720567 -139909583 - L2 LINE L2 -8 3264 2998 181 326 130 22 chr5 59721623 59721715 -139908435 + L2 LINE L2 2998 3099 -173 206 294 191 26 chr5 59722183 59722561 -139907589 - L2 LINE L2 -479 2835 2396 2075 121 26 37 chr5 59722811 59723190 -139906960 - THE1C LTR MaLR 0 375 1 829 233 41 50 chr5 59723741 59723960 -139906190 - MER20 DNA MER1_type -1 218 2 1907 179 7 54 chr5 59724290 59724699 -139905451 + MLT1B LTR MaLR 1 390 0 459 0 0 0 chr5 59725411 59725462 -139904688 + (CA)n Simple_repeat Simple_repeat 2 52 0 414 0 0 0 chr5 59725705 59725751 -139904399 + (CA)n Simple_repeat Simple_repeat 2 47 0 334 339 65 8 chr5 59725789 59725913 -139904237 - L2 LINE L2 0 3272 3142 1449 181 66 10 chr5 59725964 59726252 -139903898 + AluJo SINE Alu 1 304 -8 24 0 0 0 chr5 59727235 59727259 -139902891 + AT_rich Low_complexity Low_complexity 1 24 0 2536 82 11 11 chr5 59729927 59730294 -139899856 - L1PA14 LINE L1 -1 6160 5794 359 285 168 0 chr5 59730605 59730813 -139899337 - L1MC4a LINE L1 -302 5819 5601 271 290 68 106 chr5 59732754 59733123 -139897027 + L2 LINE L2 2107 2461 -853 657 292 81 5 chr5 59733163 59733403 -139896747 - MIR SINE MIR -1 261 4 252 366 109 34 chr5 59733658 59734008 -139896142 + L2 LINE L2 2854 3229 -43 301 305 104 13 chr5 59734535 59734689 -139895461 + L1ME LINE L1 5668 5835 -286 330 167 0 0 chr5 59734691 59734745 -139895405 + L1MC/D LINE L1 5636 5689 -655 321 262 28 9 chr5 59735105 59735212 -139894938 - MER110 LTR ERV1 -6 485 377 410 216 60 0 chr5 59735222 59735338 -139894812 - MER110 LTR ERV1 -367 124 2 1856 108 63 66 chr5 59736165 59736581 -139893569 - THE1C LTR MaLR -1 374 1 2159 125 7 3 chr5 59737428 59737732 -139892418 + AluSx SINE Alu 1 305 -7 214 283 33 22 chr5 59737749 59737841 -139892309 + MIR SINE MIR 37 129 -79 555 281 120 18 chr5 59737857 59738074 -139892076 - L2 LINE L2 0 3313 3075 233 303 28 63 chr5 59738044 59738186 -139891964 - L2 LINE L2 -3064 250 114 * 276 232 0 43 chr5 59738775 59738844 -139891306 - MIR SINE MIR 0 262 197 2087 131 3 0 chr5 59738847 59739138 -139891012 + AluSp SINE Alu 3 294 -19 193 299 15 30 chr5 59739148 59739215 -139890935 - L3 LINE CR1 -9 1568 1503 750 313 88 30 chr5 59739351 59739451 -139890699 - L3 LINE CR1 -180 1397 1304 1609 186 3 10 chr5 59739451 59739747 -139890403 - AluJb SINE Alu -18 294 1 750 313 88 30 chr5 59739747 59740046 -139890104 - L3 LINE CR1 -273 1304 975 309 365 63 11 chr5 59740230 59740419 -139889731 - L3 LINE CR1 -981 596 398 277 319 70 64 chr5 59740805 59741134 -139889016 + L3b LINE CR1 1114 1444 -139 2317 53 7 0 chr5 59742880 59743184 -139886966 + AluY SINE Alu 1 306 0 294 337 40 0 chr5 59743215 59743316 -139886834 + MER102b DNA MER1_type 223 327 -14 189 0 0 0 chr5 59744092 59744113 -139886037 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 205 239 30 0 chr5 59744479 59744546 -139885604 + (TA)n Simple_repeat Simple_repeat 2 70 0 919 258 24 42 chr5 59744846 59745183 -139884967 + MARNA DNA Mariner 204 534 -52 215 373 98 20 chr5 59745791 59745944 -139884206 - L2 LINE L2 0 3272 3108 515 319 100 34 chr5 59746137 59746457 -139883693 + MLT1I LTR MaLR 46 386 -23 1504 171 32 8 chr5 59747089 59747341 -139882809 - AluJo SINE Alu -53 259 2 1322 322 170 23 chr5 59748981 59750265 -139879885 + L2 LINE L2 1282 2753 -561 1143 82 104 16 chr5 59750394 59750577 -139879573 - MER30 DNA MER1_type -31 199 1 652 284 92 33 chr5 59750714 59751171 -139878979 - LTR33A LTR ERVL -2 521 1 182 250 0 42 chr5 59751223 59751271 -139878879 + L2 LINE L2 3182 3227 -86 13900 141 42 9 chr5 59751309 59752638 -139877512 + Tigger1 DNA MER2_type 1 1285 -1133 2225 128 31 22 chr5 59752638 59752997 -139877153 + THE1B LTR MaLR 1 362 -2 11927 88 4 1 chr5 59752999 59754573 -139875577 + THE1B-int LTR MaLR 1 1580 0 2231 128 33 19 chr5 59754573 59754932 -139875218 + THE1B LTR MaLR 1 364 0 13900 141 42 9 chr5 59754932 59755929 -139874221 + Tigger1 DNA MER2_type 1284 2408 -10 2094 116 0 17 chr5 59756031 59756333 -139873817 + AluSq SINE Alu 17 313 0 339 263 12 0 chr5 59756654 59756734 -139873416 + L2 LINE L2 3229 3309 -4 369 251 23 11 chr5 59757855 59757963 -139872187 + MER5B DNA MER1_type 74 167 -11 186 250 39 0 chr5 59758261 59758313 -139871837 - L3 LINE CR1 -297 1280 1227 228 268 61 24 chr5 59758343 59758425 -139871725 + L3 LINE CR1 1317 1401 -176 21 71 0 0 chr5 59758664 59758706 -139871444 + AT_rich Low_complexity Low_complexity 1 42 0 8449 48 0 0 chr5 59762192 59763161 -139866989 + LTR5 LTR ERVK 1 969 0 297 309 58 53 chr5 59763453 59763660 -139866490 + L2 LINE L2 2747 2954 -360 222 128 0 0 chr5 59763702 59763741 -139866409 + (CCA)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr5 59763922 59763950 -139866200 + AT_rich Low_complexity Low_complexity 1 28 0 358 288 106 6 chr5 59764180 59764350 -139865800 - MIR SINE MIR -12 250 64 185 268 146 81 chr5 59765080 59765203 -139864947 - L2 LINE L2 -5 3267 3137 236 174 43 0 chr5 59765256 59765302 -139864848 + MLT1B LTR MaLR 1 48 -342 1893 157 70 0 chr5 59765312 59765657 -139864493 + MLT1B LTR MaLR 22 390 0 2198 98 0 3 chr5 59767452 59767767 -139862383 + AluY SINE Alu 1 314 0 227 322 96 41 chr5 59768342 59768488 -139861662 + MER5B DNA MER1_type 3 156 -22 27 0 0 0 chr5 59769089 59769116 -139861034 + AT_rich Low_complexity Low_complexity 1 27 0 1755 164 0 35 chr5 59769358 59769668 -139860482 + AluJo SINE Alu 1 299 -13 25 0 0 0 chr5 59770313 59770338 -139859812 + AT_rich Low_complexity Low_complexity 1 25 0 201 74 0 0 chr5 59771490 59771517 -139858633 + (A)n Simple_repeat Simple_repeat 1 27 0 887 284 79 27 chr5 59772802 59773168 -139856982 + MLT1I LTR MaLR 19 403 -6 26 30 0 0 chr5 59773171 59773204 -139856946 + AT_rich Low_complexity Low_complexity 1 33 0 532 241 57 8 chr5 59774661 59774819 -139855331 + L1ME3A LINE L1 5989 6159 -9 21 57 0 0 chr5 59775647 59775682 -139854468 + AT_rich Low_complexity Low_complexity 1 35 0 498 0 15 0 chr5 59775707 59775773 -139854377 + L1HS LINE L1 6089 6155 0 4416 133 16 3 chr5 59775929 59776621 -139853529 + L1PA16 LINE L1 5466 6166 0 492 304 13 19 chr5 59777543 59777701 -139852449 - MER5B DNA MER1_type -14 164 8 508 252 53 71 chr5 59777940 59778166 -139851984 - MER112 DNA MER1_type -13 247 26 23 54 0 0 chr5 59778488 59778525 -139851625 + AT_rich Low_complexity Low_complexity 1 37 0 214 146 171 0 chr5 59779150 59779191 -139850959 - L2 LINE L2 -1 3312 3265 324 295 98 0 chr5 59779797 59779909 -139850241 + MIR3 SINE MIR 37 159 -49 21 0 0 0 chr5 59780447 59780468 -139849682 + AT_rich Low_complexity Low_complexity 1 21 0 1666 225 92 33 chr5 59781250 59781739 -139848411 + MLT2B1 LTR ERVL 1 518 -2 292 304 111 47 chr5 59783130 59783301 -139846849 + MIR3 SINE MIR 19 200 -8 29 0 0 0 chr5 59783987 59784016 -139846134 + AT_rich Low_complexity Low_complexity 1 29 0 715 296 58 12 chr5 59784892 59785132 -139845018 - MIR SINE MIR 0 262 12 219 226 203 0 chr5 59785825 59785928 -139844222 + MIR SINE MIR 22 144 -64 198 0 0 0 chr5 59786573 59786595 -139843555 + (A)n Simple_repeat Simple_repeat 1 22 0 25 0 0 0 chr5 59787378 59787403 -139842747 + AT_rich Low_complexity Low_complexity 1 25 0 2099 93 69 0 chr5 59787411 59787700 -139842450 + AluSc SINE Alu 1 309 0 28 0 0 0 chr5 59788656 59788684 -139841466 + AT_rich Low_complexity Low_complexity 1 28 0 181 250 100 17 chr5 59788830 59788890 -139841260 - MIR SINE MIR -86 176 112 284 248 78 54 chr5 59789311 59789440 -139840710 + MIR SINE MIR 3 134 -128 276 343 0 50 chr5 59790451 59790550 -139839600 + LTR16A LTR ERVL 357 450 0 2059 108 79 26 chr5 59791108 59791450 -139838700 + THE1B LTR MaLR 3 362 -2 198 0 0 0 chr5 59792857 59792879 -139837271 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 322 278 34 51 chr5 59793886 59794062 -139836088 + L1M2 LINE L1 4 176 -6673 * 393 177 83 10 chr5 59794036 59794132 -139836018 + L1PA15-16 LINE L1 608 710 -6139 4074 141 49 29 chr5 59794134 59794887 -139835263 - LTR1 LTR ERV1 -1 784 17 5649 252 45 68 chr5 59795418 59798435 -139831715 + L1PA15-16 LINE L1 1427 4452 -2397 4340 141 11 9 chr5 59798436 59799181 -139830969 + L1PA16 LINE L1 5421 6166 0 250 318 48 87 chr5 59800450 59800576 -139829574 + L2 LINE L2 3140 3260 -12 432 0 0 0 chr5 59801070 59801118 -139829032 + (TG)n Simple_repeat Simple_repeat 2 49 0 1544 212 7 71 chr5 59802963 59803304 -139826846 + LTR52 LTR ERVL 1 313 -108 516 93 0 0 chr5 59803304 59803379 -139826771 + (TG)n Simple_repeat Simple_repeat 1 75 0 1544 212 7 71 chr5 59803379 59803448 -139826702 + LTR52 LTR ERVL 313 385 -36 231 231 0 0 chr5 59803974 59804013 -139826137 - L2 LINE L2 -24 3248 3210 * 261 111 0 0 chr5 59803983 59804019 -139826131 - MIR SINE MIR -27 235 200 313 154 77 0 chr5 59804633 59804698 -139825452 - L1MC1 LINE L1 -9 6324 6255 23 0 0 0 chr5 59804942 59804965 -139825185 + AT_rich Low_complexity Low_complexity 1 23 0 1463 264 94 49 chr5 59805047 59805456 -139824694 + L1ME3A LINE L1 5337 5726 -444 1844 149 3 0 chr5 59805456 59805769 -139824381 + AluSq SINE Alu 1 314 0 1463 264 94 49 chr5 59805769 59805854 -139824296 + L1ME3A LINE L1 5726 5806 -364 1559 142 0 12 chr5 59805854 59806100 -139824050 + AluJo SINE Alu 69 311 -1 1463 264 94 49 chr5 59806100 59806393 -139823757 + L1ME3A LINE L1 5806 6161 -9 928 282 73 33 chr5 59806866 59807593 -139822557 + L1MEd LINE L1 612 1390 -4865 379 350 28 39 chr5 59807624 59807878 -139822272 + L1MEd LINE L1 1456 1706 -4604 225 140 7 120 chr5 59808223 59808373 -139821777 + (TTATA)n Simple_repeat Simple_repeat 1 133 0 297 234 166 28 chr5 59808413 59808811 -139821339 + L1MEd LINE L1 2729 3181 -2948 186 118 0 0 chr5 59808951 59808985 -139821165 + (TAGG)n Simple_repeat Simple_repeat 2 35 0 305 356 35 0 chr5 59811864 59811979 -139818171 - MIR3 SINE MIR -5 203 85 2528 56 0 0 chr5 59812509 59812811 -139817339 - AluY SINE Alu -9 302 1 24 0 0 0 chr5 59812916 59812940 -139817210 + AT_rich Low_complexity Low_complexity 1 24 0 592 250 62 0 chr5 59813100 59813244 -139816906 + MIR SINE MIR 66 218 -44 264 292 149 6 chr5 59813514 59813689 -139816461 + L1MEd LINE L1 3913 4112 -2017 310 222 49 12 chr5 59813702 59813783 -139816367 + MER5A DNA MER1_type 26 109 -80 304 319 38 13 chr5 59813874 59814112 -139816038 + L1MEd LINE L1 4143 4386 -1743 272 317 20 25 chr5 59814248 59814450 -139815700 + L1MEd LINE L1 4834 5034 -1095 24 0 0 0 chr5 59815185 59815209 -139814941 + AT_rich Low_complexity Low_complexity 1 24 0 243 189 0 0 chr5 59815329 59815382 -139814768 + (CA)n Simple_repeat Simple_repeat 2 54 0 739 297 17 8 chr5 59815933 59816172 -139813978 + MIR SINE MIR 12 252 -10 22 70 0 0 chr5 59816357 59816400 -139813750 + AT_rich Low_complexity Low_complexity 1 43 0 300 27 0 0 chr5 59816592 59816629 -139813521 + (TG)n Simple_repeat Simple_repeat 2 38 0 881 229 96 29 chr5 59817140 59817454 -139812696 + MER113 DNA MER1_type? 38 372 -149 316 204 0 31 chr5 59817455 59817553 -139812597 + CT-rich Low_complexity Low_complexity 1 95 0 1424 256 75 41 chr5 59817554 59818283 -139811867 - L2 LINE L2 -6 3307 2543 1872 150 10 7 chr5 59818386 59818692 -139811458 + AluSx SINE Alu 1 307 -5 303 272 0 33 chr5 59819258 59819350 -139810800 - L1MC4 LINE L1 -1340 6702 6614 210 343 9 9 chr5 59819869 59819974 -139810176 + L2 LINE L2 2579 2683 -631 249 271 68 0 chr5 59820238 59820297 -139809853 + L2 LINE L2 3241 3303 -10 2127 167 5 13 chr5 59822095 59822473 -139807677 + THE1C LTR MaLR 1 375 0 9273 114 50 43 chr5 59822473 59824041 -139806109 + THE1C-int LTR MaLR 1 1580 0 2090 150 21 19 chr5 59824041 59824415 -139805735 + THE1C LTR MaLR 1 375 0 1819 159 0 7 chr5 59825036 59825332 -139804818 - AluJb SINE Alu -18 294 1 252 234 47 0 chr5 59825359 59825423 -139804727 - L1ME LINE L1 -388 5776 5710 460 318 110 57 chr5 59826707 59827144 -139803006 + L3 LINE CR1 700 1159 -418 182 313 30 61 chr5 59827731 59827862 -139802288 + L3 LINE CR1 1277 1403 -174 450 213 195 0 chr5 59828367 59828517 -139801633 - MER5A DNA MER1_type -2 187 4 1655 142 92 3 chr5 59828760 59829076 -139801074 + MER2 DNA MER2_type 1 344 0 286 259 259 14 chr5 59829628 59829840 -139800310 + L2 LINE L2 2921 3184 -129 1865 210 60 29 chr5 59829850 59830330 -139799820 - MLT1D LTR MaLR -5 500 6 533 258 0 45 chr5 59830332 59830464 -139799686 + L2 LINE L2 3187 3312 -1 1995 133 7 10 chr5 59830542 59830844 -139799306 - AluSx SINE Alu -11 301 1 222 340 57 0 chr5 59830850 59830956 -139799194 + MIR SINE MIR 75 186 -76 22 0 0 0 chr5 59831686 59831708 -139798442 + AT_rich Low_complexity Low_complexity 1 22 0 777 267 0 0 chr5 59832048 59832213 -139797937 + MER5A DNA MER1_type 1 165 -24 203 284 43 62 chr5 59833601 59833763 -139796387 + MER5A DNA MER1_type 1 159 -30 2560 68 0 0 chr5 59834630 59834941 -139795209 + AluY SINE Alu 1 311 0 467 319 132 60 chr5 59836717 59837643 -139792507 + L2 LINE L2 2279 3272 0 270 95 0 0 chr5 59838216 59838258 -139791892 + (CA)n Simple_repeat Simple_repeat 2 43 0 851 222 16 32 chr5 59838370 59838555 -139791595 - MER5A DNA MER1_type 0 189 8 205 191 0 0 chr5 59838756 59838798 -139791352 + A-rich Low_complexity Low_complexity 1 42 0 346 289 113 0 chr5 59839531 59839628 -139790522 + L2 LINE L2 3184 3291 -22 367 330 64 0 chr5 59843562 59843671 -139786479 + L2 LINE L2 3140 3255 -17 184 255 41 71 chr5 59843645 59843743 -139786407 - MIR SINE MIR -134 128 34 * 718 190 190 0 chr5 59844535 59844751 -139785399 - ORSL DNA AcHobo -10 265 9 598 303 75 50 chr5 59846249 59846625 -139783525 + MLT1K LTR MaLR 190 574 -14 868 297 55 52 chr5 59846817 59847218 -139782932 - L2 LINE L2 -2 3311 2910 204 254 18 0 chr5 59848135 59848190 -139781960 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 330 323 21 0 chr5 59848317 59848413 -139781737 - MIR3 SINE MIR -3 205 108 23 0 0 0 chr5 59848519 59848542 -139781608 + AT_rich Low_complexity Low_complexity 1 23 0 319 302 0 0 chr5 59848731 59848827 -139781323 - L1ME LINE L1 -413 5708 5613 2237 96 3 3 chr5 59849109 59849400 -139780750 - AluSg SINE Alu -17 293 3 55 76 0 0 chr5 59849626 59849744 -139780406 + AT_rich Low_complexity Low_complexity 1 118 0 273 293 19 38 chr5 59849753 59849859 -139780291 - L1P LINE L1 -1161 4985 4882 216 0 0 0 chr5 59849878 59849902 -139780248 + (CA)n Simple_repeat Simple_repeat 1 24 0 1534 197 0 11 chr5 59850340 59850609 -139779541 + AluJo SINE Alu 1 266 -46 306 378 37 9 chr5 59851047 59851264 -139778886 - L1M4 LINE L1 -2202 3944 3722 308 335 43 39 chr5 59851315 59851548 -139778602 - L1M4 LINE L1 -2503 3643 3410 201 341 55 0 chr5 59852349 59852440 -139777710 - MIR SINE MIR 0 262 167 718 277 71 51 chr5 59852631 59852884 -139777266 - MIR SINE MIR 0 262 5 3570 144 15 5 chr5 59853308 59853913 -139776237 + L1PA13 LINE L1 5542 6152 -11 237 196 0 0 chr5 59855253 59855309 -139774841 + GA-rich Low_complexity Low_complexity 3 58 0 502 352 77 30 chr5 59856503 59856841 -139773309 - L2 LINE L2 0 3313 2960 21 0 0 0 chr5 59857608 59857629 -139772521 + AT_rich Low_complexity Low_complexity 1 21 0 228 67 0 0 chr5 59858805 59858835 -139771315 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 359 251 169 51 chr5 59859396 59859591 -139770559 + MLT1I LTR MaLR 1 218 -191 2173 107 7 7 chr5 59860055 59860353 -139769797 + AluSq SINE Alu 3 300 -13 261 0 0 0 chr5 59860535 59860564 -139769586 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 854 306 4 4 chr5 59861908 59862163 -139767987 - MIR SINE MIR 0 262 8 574 266 45 60 chr5 59862398 59862657 -139767493 + MIR SINE MIR 3 261 -1 1554 208 3 7 chr5 59863642 59863930 -139766220 + AluJb SINE Alu 1 287 -25 24 0 0 0 chr5 59864401 59864425 -139765725 + AT_rich Low_complexity Low_complexity 1 24 0 219 357 54 18 chr5 59864690 59864858 -139765292 + L2 LINE L2 2886 3059 -213 414 0 0 0 chr5 59864940 59864986 -139765164 + (TG)n Simple_repeat Simple_repeat 1 46 0 231 352 0 0 chr5 59865027 59865081 -139765069 + L2 LINE L2 3139 3192 -80 6127 168 59 36 chr5 59866121 59867467 -139762683 + L1MC3 LINE L1 6410 7785 0 394 329 179 20 chr5 59867956 59868348 -139761802 - L3 LINE CR1 -143 1434 981 2524 58 0 0 chr5 59870872 59871181 -139758969 - AluY SINE Alu -2 309 1 1948 152 0 0 chr5 59872117 59872407 -139757743 + AluSx SINE Alu 1 290 -22 714 86 0 0 chr5 59872407 59872523 -139757627 + (TA)n Simple_repeat Simple_repeat 2 117 0 25 0 0 0 chr5 59872582 59872607 -139757543 + AT_rich Low_complexity Low_complexity 1 25 0 385 358 58 6 chr5 59872758 59872931 -139757219 - MIR SINE MIR -61 201 20 335 235 0 102 chr5 59874067 59874165 -139755985 - L2 LINE L2 -5 3267 3180 659 228 111 6 chr5 59874456 59874627 -139755523 - MIR SINE MIR -4 258 70 23 54 0 0 chr5 59874792 59874829 -139755321 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr5 59874872 59874902 -139755248 + AT_rich Low_complexity Low_complexity 1 30 0 225 248 71 97 chr5 59875839 59875952 -139754198 - MIR3 SINE MIR -5 203 94 198 64 21 64 chr5 59877266 59877313 -139752837 + (TTCTCC)n Simple_repeat Simple_repeat 4 48 0 208 358 90 15 chr5 59877971 59878105 -139752045 + MER91A DNA MER1_type 1 144 -52 359 336 65 40 chr5 59878498 59878745 -139751405 + MIR SINE MIR 3 255 -7 1017 211 22 36 chr5 59878812 59879035 -139751115 - AluJb SINE Alu -12 300 81 26 30 0 0 chr5 59879210 59879243 -139750907 + AT_rich Low_complexity Low_complexity 1 33 0 186 244 0 22 chr5 59883212 59883257 -139746893 - L2 LINE L2 -15 3298 3255 21 0 0 0 chr5 59884376 59884397 -139745753 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr5 59887287 59887335 -139742815 + AT_rich Low_complexity Low_complexity 1 48 0 833 279 39 0 chr5 59887342 59887571 -139742579 - MIR SINE MIR -20 242 5 627 153 59 17 chr5 59888756 59888874 -139741276 + FLAM_A SINE Alu 10 132 -10 24 53 0 0 chr5 59890265 59890303 -139739847 + AT_rich Low_complexity Low_complexity 1 38 0 307 350 0 4 chr5 59891169 59891301 -139738849 + MIR SINE MIR 33 161 -65 37 23 0 0 chr5 59891302 59891346 -139738804 + AT_rich Low_complexity Low_complexity 1 44 0 4033 144 56 111 chr5 59891839 59892642 -139737508 + L1MCa LINE L1 3 849 -5577 315 0 0 0 chr5 59892642 59892677 -139737473 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1886 153 0 3 chr5 59892677 59892959 -139737191 - AluSq SINE Alu -32 281 1 4033 144 56 111 chr5 59892959 59893108 -139737042 + L1MCa LINE L1 847 903 -5523 1355 168 25 18 chr5 59893108 59893394 -139736756 + L1MC1 LINE L1 6037 6324 -9 30 0 0 0 chr5 59894337 59894367 -139735783 + AT_rich Low_complexity Low_complexity 1 30 0 229 172 31 0 chr5 59894549 59894613 -139735537 + (TA)n Simple_repeat Simple_repeat 2 67 0 294 244 33 67 chr5 59894826 59894916 -139735234 + L2 LINE L2 3202 3288 -25 22 35 0 0 chr5 59894950 59894979 -139735171 + AT_rich Low_complexity Low_complexity 1 29 0 249 33 0 0 chr5 59895852 59895882 -139734268 + (GA)n Simple_repeat Simple_repeat 1 30 0 613 214 15 15 chr5 59897140 59897271 -139732879 + FLAM_C SINE Alu 7 137 -6 1724 113 82 0 chr5 59897560 59897727 -139732423 - AluSq SINE Alu -2 311 114 230 0 33 0 chr5 59897727 59897757 -139732393 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1724 113 82 0 chr5 59897757 59897845 -139732305 - AluSq SINE Alu -199 114 35 552 241 127 34 chr5 59898692 59898928 -139731222 + MLT1L LTR MaLR 352 609 -6 4740 157 79 9 chr5 59900188 59901997 -139728153 + L1MA8 LINE L1 3562 5652 -639 1817 158 31 26 chr5 59901997 59902383 -139727767 + L1MA8 LINE L1 5898 6286 -5 180 276 198 9 chr5 59902551 59902667 -139727483 + MIR SINE MIR 119 256 -6 492 293 83 45 chr5 59902880 59903327 -139726823 + L1MC/D LINE L1 5284 5747 -2061 234 229 0 0 chr5 59904340 59904410 -139725740 + (TA)n Simple_repeat Simple_repeat 2 71 0 532 219 55 20 chr5 59904736 59904882 -139725268 - MIR SINE MIR -66 196 46 526 248 101 7 chr5 59905012 59905161 -139724989 - MIR SINE MIR -27 235 73 410 227 155 7 chr5 59907199 59907396 -139722754 + MLT1F1 LTR MaLR 174 425 -117 575 244 41 0 chr5 59907529 59907652 -139722498 + MLT1I LTR MaLR 9 136 -273 333 0 0 0 chr5 59907689 59907726 -139722424 + (CA)n Simple_repeat Simple_repeat 2 38 0 593 275 93 45 chr5 59907789 59908036 -139722114 + MLT1I LTR MaLR 124 382 -27 1732 203 34 6 chr5 59909399 59909753 -139720397 - MLT1A1 LTR MaLR 0 365 2 578 274 49 25 chr5 59909773 59909977 -139720173 + L2 LINE L2 3089 3297 -16 215 31 31 0 chr5 59910556 59910588 -139719562 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1850 311 111 21 chr5 59910776 59911991 -139718159 - L2 LINE L2 0 3313 1999 28 86 0 0 chr5 59912289 59912359 -139717791 + AT_rich Low_complexity Low_complexity 1 70 0 1880 166 7 0 chr5 59913164 59913460 -139716690 - AluJb SINE Alu -14 298 1 1693 39 10 0 chr5 59914300 59914507 -139715643 - L1PA4 LINE L1 0 6155 5947 402 21 0 0 chr5 59915245 59915292 -139714858 + (TA)n Simple_repeat Simple_repeat 2 48 0 1561 225 99 24 chr5 59915766 59916188 -139713962 + MLT1C LTR MaLR 14 467 0 676 369 95 21 chr5 59916676 59917044 -139713106 - L2 LINE L2 -338 2976 2550 1199 212 109 41 chr5 59917044 59917383 -139712767 + MLT1A1 LTR MaLR 1 362 -3 676 369 95 21 chr5 59917383 59917583 -139712567 - L2 LINE L2 -764 2550 2366 453 314 13 25 chr5 59917765 59917924 -139712226 - MER5B DNA MER1_type -21 157 1 195 319 13 64 chr5 59918002 59918159 -139711991 - L2 LINE L2 -1265 2049 1901 476 299 35 25 chr5 59918754 59918951 -139711199 - L2 LINE L2 -2399 915 717 414 269 92 0 chr5 59918948 59919067 -139711083 + MER5B DNA MER1_type 5 134 -44 * 285 305 0 12 chr5 59920514 59920596 -139709554 + (CATA)n Simple_repeat Simple_repeat 3 83 0 306 263 39 51 chr5 59921325 59921481 -139708669 - MER104 DNA Tc2 0 180 27 329 175 0 16 chr5 59921597 59921660 -139708490 + MER3 DNA MER1_type 1 62 -147 288 331 53 8 chr5 59922244 59922377 -139707773 - MIR SINE MIR 0 262 124 1668 232 78 65 chr5 59923318 59923917 -139706233 + MLT1E3 LTR MaLR 10 616 -8 2270 72 0 28 chr5 59924146 59924468 -139705682 + AluY SINE Alu 3 316 0 489 142 0 47 chr5 59924641 59924747 -139705403 + L1MA9 LINE L1 6209 6309 -3 437 176 0 0 chr5 59926709 59926750 -139703400 + MER3 DNA MER1_type 7 47 -162 361 141 154 0 chr5 59926750 59926828 -139703322 - MER3 DNA MER1_type 0 209 120 347 322 90 31 chr5 59926930 59927145 -139703005 - L2 LINE L2 -24 3289 3055 2752 94 8 0 chr5 59927145 59927517 -139702633 - THE1C LTR MaLR 0 375 1 347 322 90 31 chr5 59927517 59927556 -139702594 - L2 LINE L2 -258 3055 3020 2033 179 12 51 chr5 59927559 59928045 -139702105 + MLT1C LTR MaLR 1 467 0 356 333 23 29 chr5 59928084 59928258 -139701892 - MIR SINE MIR -71 191 19 272 353 29 14 chr5 59929200 59929339 -139700811 + MIR SINE MIR 59 199 -63 622 291 29 29 chr5 59929440 59929681 -139700469 - MIR SINE MIR -13 249 9 30829 116 12 57 chr5 59929801 59934796 -139695354 + L1PA7 LINE L1 13 4652 -1502 194 0 39 0 chr5 59934796 59934822 -139695328 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 30829 116 12 57 chr5 59934822 59936177 -139693973 + L1PA7 LINE L1 4652 6066 -88 25 0 0 0 chr5 59937456 59937481 -139692669 + AT_rich Low_complexity Low_complexity 1 25 0 242 279 0 0 chr5 59937981 59938042 -139692108 - L2 LINE L2 -964 2350 2290 297 0 0 0 chr5 59938164 59938197 -139691953 + (TG)n Simple_repeat Simple_repeat 1 33 0 355 333 25 39 chr5 59938508 59938699 -139691451 - MIR SINE MIR -68 140 1 587 188 14 14 chr5 59939586 59939724 -139690426 - L1MA10 LINE L1 -7 6327 6190 253 301 0 0 chr5 59940288 59940371 -139689779 + L1MC/D LINE L1 5716 5798 -2010 31 99 0 0 chr5 59940590 59940691 -139689459 + AT_rich Low_complexity Low_complexity 1 101 0 2457 104 8 8 chr5 59940720 59941075 -139689075 + THE1A LTR MaLR 1 355 0 1158 236 73 18 chr5 59941346 59941728 -139688422 + L1MEc LINE L1 36 438 -5958 422 248 35 30 chr5 59941758 59941906 -139688244 + L1MA10 LINE L1 5989 6302 -23 1887 266 53 6 chr5 59943560 59944102 -139686048 + MER69 DNA AcHobo 1 568 -658 1657 236 25 19 chr5 59944100 59944613 -139685537 + MER69 DNA AcHobo 2010 2525 -1 * 22 0 0 0 chr5 59944834 59944856 -139685294 + AT_rich Low_complexity Low_complexity 1 22 0 2307 97 0 0 chr5 59945092 59945392 -139684758 + AluY SINE Alu 1 300 -11 25 51 0 0 chr5 59945798 59945837 -139684313 + AT_rich Low_complexity Low_complexity 1 39 0 451 322 122 50 chr5 59947020 59947396 -139682754 + L3 LINE CR1 1174 1576 -1 414 0 0 0 chr5 59948243 59948289 -139681861 + (T)n Simple_repeat Simple_repeat 1 46 0 26 50 0 0 chr5 59949287 59949327 -139680823 + AT_rich Low_complexity Low_complexity 1 40 0 2393 50 0 3 chr5 59949330 59949660 -139680490 + AluY SINE Alu 1 329 0 21 0 0 0 chr5 59949929 59949950 -139680200 + AT_rich Low_complexity Low_complexity 1 21 0 204 163 0 0 chr5 59950092 59950135 -139680015 + GA-rich Low_complexity Low_complexity 4 46 0 1117 229 122 36 chr5 59950206 59950591 -139679559 + LTR16A LTR ERVL 28 445 -5 21 36 0 0 chr5 59951351 59951379 -139678771 + AT_rich Low_complexity Low_complexity 1 28 0 1401 105 25 0 chr5 59951562 59951762 -139678388 - AluSq SINE Alu -9 304 100 274 258 18 24 chr5 59952159 59952281 -139677869 + GA-rich Low_complexity Low_complexity 2 124 -43 1569 199 3 0 chr5 59952281 59952578 -139677572 + AluJb SINE Alu 1 298 -14 274 258 18 24 chr5 59952578 59952622 -139677528 + GA-rich Low_complexity Low_complexity 124 167 0 2425 177 112 6 chr5 59952928 59953465 -139676685 - L1MB8 LINE L1 -2 6176 5583 1358 60 5 75 chr5 59953925 59954126 -139676024 - MER107 DNA MER1_type -8 189 3 207 349 83 8 chr5 59954127 59954259 -139675891 - MIR3 SINE MIR -36 172 31 421 220 23 28 chr5 59954478 59954655 -139675495 + (CA)n Simple_repeat Simple_repeat 1 176 0 209 320 110 0 chr5 59955324 59955424 -139674726 + MIR SINE MIR 152 262 0 283 262 65 87 chr5 59956469 59956698 -139673452 - MIR SINE MIR 0 262 39 2285 66 0 11 chr5 59956742 59957028 -139673122 - AluY SINE Alu -16 295 13 219 88 0 0 chr5 59957164 59957198 -139672952 + (TG)n Simple_repeat Simple_repeat 2 35 0 738 193 29 41 chr5 59957204 59957375 -139672775 + FRAM SINE Alu 1 161 -15 21 0 0 0 chr5 59958232 59958253 -139671897 + AT_rich Low_complexity Low_complexity 1 21 0 1445 225 0 14 chr5 59958259 59958543 -139671607 + AluSx SINE Alu 1 280 -32 261 0 0 0 chr5 59958547 59958576 -139671574 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 243 0 0 0 chr5 59959431 59959458 -139670692 + (TA)n Simple_repeat Simple_repeat 1 27 0 386 250 44 59 chr5 59960347 59960483 -139669667 + MLT1I LTR MaLR 108 215 -194 23 0 0 0 chr5 59961086 59961109 -139669041 + AT_rich Low_complexity Low_complexity 1 23 0 2060 131 0 19 chr5 59961518 59961831 -139668319 - AluSx SINE Alu -5 307 1 1833 184 3 57 chr5 59963991 59964323 -139665827 + MLT1A1 LTR MaLR 2 312 -53 2232 101 0 0 chr5 59964323 59964621 -139665529 - AluSx SINE Alu -14 298 1 1833 184 3 57 chr5 59964621 59964673 -139665477 + MLT1A1 LTR MaLR 312 365 0 246 62 0 0 chr5 59965654 59965686 -139664464 + (CATTG)n Simple_repeat Simple_repeat 2 33 0 1002 154 0 0 chr5 59965686 59965829 -139664321 - AluJb SINE Alu -26 286 144 244 348 93 29 chr5 59965844 59966154 -139663996 + L2 LINE L2 2301 2630 -684 1783 172 7 13 chr5 59966791 59967284 -139662866 + AluJo SINE Alu 4 494 0 2060 95 6 57 chr5 59967456 59967771 -139662379 - AluSp SINE Alu -14 299 1 21 71 0 0 chr5 59967805 59967847 -139662303 + AT_rich Low_complexity Low_complexity 1 42 0 548 253 34 14 chr5 59968491 59968637 -139661513 + MIR SINE MIR 114 262 0 2136 162 0 11 chr5 59968676 59969040 -139661110 + MER46B DNA MER2_type 2 236 0 669 215 7 22 chr5 59969192 59969327 -139660823 - FLAM_A SINE Alu 0 133 1 1822 181 3 0 chr5 59969885 59970194 -139659956 + AluJb SINE Alu 1 310 -2 257 204 21 190 chr5 59972663 59972805 -139657345 + L2 LINE L2 3155 3272 0 300 241 194 9 chr5 59973863 59973971 -139656179 + MIR SINE MIR 20 147 -115 1876 147 0 14 chr5 59974070 59974362 -139655788 - AluJb SINE Alu -24 288 1 207 0 0 0 chr5 59974467 59974490 -139655660 + (CA)n Simple_repeat Simple_repeat 2 24 0 1868 114 91 6 chr5 59975039 59975390 -139654760 - L1MA5A LINE L1 -3 6294 5914 1946 137 17 0 chr5 59976838 59977131 -139653019 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 59977718 59977739 -139652411 + AT_rich Low_complexity Low_complexity 1 21 0 4805 212 67 58 chr5 59978896 59979815 -139650335 + L1MC4 LINE L1 6217 7125 -917 1575 182 84 45 chr5 59979815 59979989 -139650161 + MSTD LTR MaLR 3 169 -227 2254 82 7 10 chr5 59979989 59980292 -139649858 + AluY SINE Alu 1 302 -9 1575 182 84 45 chr5 59980292 59980496 -139649654 + MSTD LTR MaLR 169 396 0 4805 212 67 58 chr5 59980496 59980852 -139649298 + L1MC4 LINE L1 7125 7476 -566 1883 206 6 8 chr5 59980852 59981216 -139648934 + MLT1A1 LTR MaLR 1 363 -2 4805 212 67 58 chr5 59981216 59981772 -139648378 + L1MC4 LINE L1 7476 8042 0 225 287 139 16 chr5 59982666 59982788 -139647362 + L2 LINE L2 3177 3313 0 828 328 91 5 chr5 59982995 59983422 -139646728 + LTR16B LTR ERVL 1 464 0 230 281 150 26 chr5 59983573 59983726 -139646424 - L3b LINE CR1 -120 1463 1292 764 275 32 32 chr5 59984593 59984844 -139645306 - MIR SINE MIR -10 252 2 287 208 19 0 chr5 59984946 59984999 -139645151 + L2 LINE L2 3259 3312 -1 29493 52 3 1 chr5 59985595 59990103 -139640047 + L1PA5 LINE L1 1633 6153 -1 263 302 104 28 chr5 59991166 59991348 -139638802 + MIR SINE MIR 65 260 -2 27 29 0 0 chr5 59991550 59991584 -139638566 + AT_rich Low_complexity Low_complexity 1 34 0 2028 133 13 23 chr5 59993972 59994281 -139635869 - AluJb SINE Alu -6 306 1 398 228 228 0 chr5 59994501 59994646 -139635504 - MIR SINE MIR -56 206 29 690 253 63 66 chr5 59994683 59994984 -139635166 - L2 LINE L2 -5 3308 3009 253 302 142 12 chr5 59995546 59995715 -139634435 - L2 LINE L2 0 3313 3123 500 259 75 0 chr5 59995899 59996046 -139634104 - MIR SINE MIR -59 203 46 185 285 46 69 chr5 59996274 59996404 -139633746 + MIR SINE MIR 59 185 -77 21 36 0 0 chr5 59997714 59997742 -139632408 + AT_rich Low_complexity Low_complexity 1 28 0 296 334 175 15 chr5 59999222 59999621 -139630529 + L2 LINE L2 2580 3042 -230 207 100 0 0 chr5 59999853 59999883 -139630267 + (TGAG)n Simple_repeat Simple_repeat 1 30 0 2294 88 0 10 chr5 60000502 60000798 -139629352 - AluY SINE Alu -18 293 1 298 133 0 0 chr5 60000866 60000911 -139629239 + AluJ/FRAM SINE Alu 223 267 -35 2043 138 0 31 chr5 60000950 60001268 -139628882 + AluJb SINE Alu 1 308 -4 191 161 0 0 chr5 60001996 60002027 -139628123 - L3 LINE CR1 -1017 560 530 476 273 63 7 chr5 60002027 60002170 -139627980 + L3 LINE CR1 514 664 -913 222 207 0 0 chr5 60002326 60002384 -139627766 + GA-rich Low_complexity Low_complexity 2 59 0 189 338 0 13 chr5 60004071 60004148 -139626002 - MIR SINE MIR -14 248 173 256 279 16 0 chr5 60004246 60004307 -139625843 + MIR SINE MIR 5 66 -196 338 257 156 0 chr5 60005653 60005762 -139624388 - L2 LINE L2 0 3272 3147 323 239 15 0 chr5 60005806 60005873 -139624277 + MER58A DNA MER1_type 1 68 -39 4046 92 20 8 chr5 60005880 60006658 -139623492 - L1PA10 LINE L1 0 6131 5330 842 161 97 0 chr5 60006660 60006846 -139623304 + L1P LINE L1 3094 3297 -2849 378 304 25 70 chr5 60007389 60007547 -139622603 - MIR3 SINE MIR -7 201 51 223 333 85 18 chr5 60009204 60009369 -139620781 - MIR SINE MIR -3 259 84 35 71 0 0 chr5 60009721 60009791 -139620359 + AT_rich Low_complexity Low_complexity 1 70 0 252 0 0 0 chr5 60010769 60010797 -139619353 + (TA)n Simple_repeat Simple_repeat 2 29 0 31 0 0 0 chr5 60010991 60011022 -139619128 + AT_rich Low_complexity Low_complexity 1 31 0 2090 150 50 3 chr5 60011607 60011946 -139618204 + LTR18A LTR ERVL 3 357 0 2524 207 6 27 chr5 60011960 60012890 -139617260 + HERVL18 LTR ERVL 9 1614 -4433 1394 131 22 2 chr5 60012923 60013193 -139616957 + HERVL18 LTR ERVL 2120 2452 -3595 * 5451 157 2 22 chr5 60013192 60014069 -139616081 + HERVL18 LTR ERVL 2720 3579 -2468 619 129 21 0 chr5 60014071 60014164 -139615986 + HERVL18 LTR ERVL 4394 4488 -1559 563 226 0 0 chr5 60014222 60014324 -139615826 + HERVL18 LTR ERVL 5946 6047 0 2403 121 29 3 chr5 60014446 60014794 -139615356 + LTR18A LTR ERVL 1 357 0 388 297 59 45 chr5 60014795 60015017 -139615133 + L1ME LINE L1 5483 5707 -455 183 80 0 0 chr5 60015020 60015045 -139615105 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 533 189 114 23 chr5 60016131 60016263 -139613887 - MIR SINE MIR -3 259 116 217 275 42 92 chr5 60016294 60016414 -139613736 - MER5A DNA MER1_type -7 182 69 2003 202 21 7 chr5 60017532 60017962 -139612188 + MER63B DNA MER1_type 1 436 0 214 298 18 0 chr5 60018119 60018176 -139611974 - MIR3 SINE MIR -4 204 147 1431 201 66 7 chr5 60018536 60018809 -139611341 - AluJo SINE Alu -23 289 1 235 321 27 71 chr5 60019272 60019384 -139610766 - MER5A DNA MER1_type -25 164 58 576 262 21 0 chr5 60019791 60019932 -139610218 - MIR SINE MIR -2 260 117 485 299 94 20 chr5 60021626 60021827 -139608323 + MIR SINE MIR 47 262 0 183 156 0 0 chr5 60022298 60022330 -139607820 + T-rich Low_complexity Low_complexity 4 35 0 653 213 35 7 chr5 60022719 60022860 -139607290 - L1PA15 LINE L1 0 6165 6021 329 305 25 17 chr5 60023276 60023394 -139606756 + MIR SINE MIR 37 155 -107 291 278 180 0 chr5 60024232 60024399 -139605751 + MIR SINE MIR 31 229 -33 1441 197 91 29 chr5 60024684 60025035 -139605115 + MLT1A2 LTR MaLR 1 373 -1 445 268 89 8 chr5 60025271 60025394 -139604756 - L2 LINE L2 -2 3270 3138 329 318 39 26 chr5 60025990 60026144 -139604006 + MIR SINE MIR 21 176 -86 463 313 8 16 chr5 60026478 60026606 -139603544 - MIR SINE MIR -111 151 25 22 0 0 0 chr5 60027000 60027022 -139603128 + AT_rich Low_complexity Low_complexity 1 22 0 255 282 0 13 chr5 60029386 60029464 -139600686 + MLT1L LTR MaLR 1 77 -538 359 311 82 36 chr5 60029720 60029939 -139600211 + MLT1L LTR MaLR 385 613 -2 327 65 0 0 chr5 60030763 60030809 -139599341 + (CA)n Simple_repeat Simple_repeat 1 46 0 1973 141 0 14 chr5 60034042 60034339 -139595811 - AluSx SINE Alu -19 293 1 330 53 175 0 chr5 60034446 60034503 -139595647 + L1PA4 LINE L1 6085 6151 -4 2284 122 0 0 chr5 60034768 60035079 -139595071 + AluSx SINE Alu 1 311 -1 266 268 0 32 chr5 60035134 60035229 -139594921 + L1ME LINE L1 5678 5769 -352 235 296 62 0 chr5 60035811 60035892 -139594258 + MIR3 SINE MIR 85 170 -38 22 0 0 0 chr5 60036078 60036100 -139594050 + AT_rich Low_complexity Low_complexity 1 22 0 248 213 27 13 chr5 60036166 60036241 -139593909 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 22 0 0 0 chr5 60036761 60036783 -139593367 + AT_rich Low_complexity Low_complexity 1 22 0 33 25 0 0 chr5 60037056 60037096 -139593054 + AT_rich Low_complexity Low_complexity 1 40 0 1884 176 0 0 chr5 60037509 60037822 -139592328 + AluSx SINE Alu 1 313 0 480 286 27 7 chr5 60039106 60039253 -139590897 - MIR3 SINE MIR -27 181 32 297 267 140 47 chr5 60039515 60039665 -139590485 + MIR3 SINE MIR 15 178 -30 222 37 0 0 chr5 60040401 60040428 -139589722 + (CAT)n Simple_repeat Simple_repeat 2 28 0 2155 117 0 0 chr5 60040454 60040735 -139589415 - AluSq SINE Alu -32 281 1 1722 196 58 3 chr5 60041693 60042087 -139588063 + L1M3 LINE L1 5277 5691 -480 232 127 73 0 chr5 60042313 60042368 -139587782 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 22 35 0 0 chr5 60044455 60044484 -139585666 + AT_rich Low_complexity Low_complexity 1 29 0 2789 236 94 180 chr5 60044912 60046472 -139583678 + L2 LINE L2 136 1828 -1485 1489 252 67 26 chr5 60046472 60046651 -139583499 + MLT1F LTR MaLR 41 211 -331 4407 37 0 11 chr5 60046651 60047191 -139582959 + L1PA5 LINE L1 5621 6154 0 1489 252 67 26 chr5 60047191 60047471 -139582679 + MLT1F LTR MaLR 211 519 -23 2789 236 94 180 chr5 60047471 60047621 -139582529 + L2 LINE L2 1828 1989 -1324 1901 130 43 10 chr5 60047621 60047922 -139582228 - AluSx SINE Alu -1 311 1 2789 236 94 180 chr5 60047922 60049025 -139581125 + L2 LINE L2 1989 3201 -112 1734 159 6 38 chr5 60049025 60049340 -139580810 + AluJo SINE Alu 1 305 -7 2789 236 94 180 chr5 60049340 60049444 -139580706 + L2 LINE L2 3201 3312 -1 333 0 0 0 chr5 60049946 60049983 -139580167 + (TG)n Simple_repeat Simple_repeat 1 37 0 186 43 0 0 chr5 60049989 60050012 -139580138 + (CGAG)n Simple_repeat Simple_repeat 2 24 0 252 296 78 17 chr5 60050228 60050343 -139579807 + MIR SINE MIR 108 229 -33 235 328 62 39 chr5 60050694 60050822 -139579328 - MIR SINE MIR -71 191 61 287 358 11 11 chr5 60050835 60050930 -139579220 - L2 LINE L2 -21 3251 3157 745 204 51 37 chr5 60050939 60051155 -139578995 + MER20 DNA MER1_type 1 219 0 936 212 58 0 chr5 60051291 60051480 -139578670 + MER58A DNA MER1_type 1 200 -24 2121 116 7 0 chr5 60052419 60052703 -139577447 + AluSx SINE Alu 1 286 -26 804 233 17 6 chr5 60052803 60052979 -139577171 + MER45A DNA AcHobo 1 178 0 252 0 0 0 chr5 60053169 60053197 -139576953 + (T)n Simple_repeat Simple_repeat 1 28 0 982 272 66 27 chr5 60053415 60053856 -139576294 - MER113 DNA MER1_type? -33 488 31 41 48 0 0 chr5 60054359 60054421 -139575729 + AT_rich Low_complexity Low_complexity 1 62 0 291 71 0 0 chr5 60054877 60054919 -139575231 + (CA)n Simple_repeat Simple_repeat 2 43 0 201 400 51 42 chr5 60055095 60055182 -139574968 - L2 LINE L2 -12 3260 3175 2019 118 45 0 chr5 60055182 60055469 -139574681 - AluSx SINE Alu -12 300 1 201 400 51 42 chr5 60055469 60055596 -139574554 - L2 LINE L2 -97 3175 3044 256 238 104 105 chr5 60056475 60056701 -139573449 + MIR3 SINE MIR 12 245 -17 5379 107 103 7 chr5 60059347 60060277 -139569873 - Tigger3b DNA MER2_type -27 1204 185 297 244 24 0 chr5 60060420 60060543 -139569607 + (TA)n Simple_repeat Simple_repeat 1 126 0 235 282 19 0 chr5 60060789 60060949 -139569201 + (TATATG)n Simple_repeat Simple_repeat 1 163 0 544 228 0 22 chr5 60060950 60061134 -139569016 + (TA)n Simple_repeat Simple_repeat 1 180 0 351 0 0 0 chr5 60061209 60061248 -139568902 + (TA)n Simple_repeat Simple_repeat 2 40 0 1296 56 0 0 chr5 60061527 60061688 -139568462 + L1PA3 LINE L1 5992 6152 -3 2102 131 0 3 chr5 60062668 60062973 -139567177 - AluSx SINE Alu -8 304 1 230 329 12 47 chr5 60063024 60063109 -139567041 - L2 LINE L2 -4 3268 3187 375 339 70 4 chr5 60063147 60063374 -139566776 + L3 LINE CR1 1264 1505 -72 825 286 117 22 chr5 60063498 60063865 -139566285 + MLT1J2 LTR MaLR 49 450 0 194 265 6 122 chr5 60068260 60068441 -139561709 - L2 LINE L2 -33 3280 3121 201 143 0 0 chr5 60068600 60068635 -139561515 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 292 253 7 137 chr5 60068785 60068865 -139561285 - L2 LINE L2 -5 3267 3212 1786 170 3 3 chr5 60068865 60069183 -139560967 + AluJb SINE Alu 1 318 0 292 253 7 137 chr5 60069183 60069247 -139560903 - L2 LINE L2 -60 3212 3141 352 45 0 0 chr5 60069738 60069782 -139560368 - MADE1 DNA Mariner -3 77 34 506 221 69 103 chr5 60070748 60070952 -139559198 + MIR SINE MIR 53 249 -13 458 326 86 18 chr5 60070995 60071216 -139558934 - MIR SINE MIR -23 239 4 23 54 0 0 chr5 60071539 60071576 -139558574 + AT_rich Low_complexity Low_complexity 1 37 0 2117 125 3 22 chr5 60072637 60072956 -139557194 - AluSq SINE Alu 0 313 1 378 277 68 34 chr5 60073354 60073502 -139556648 - MIR SINE MIR -28 234 82 253 341 0 11 chr5 60074148 60074236 -139555914 + MIR SINE MIR 43 129 -79 251 291 13 0 chr5 60074885 60074964 -139555186 + MER103 DNA DNA 30 109 -57 364 275 178 1 chr5 60075419 60075561 -139554589 - MER5A DNA MER1_type -2 187 11 24 32 0 0 chr5 60075910 60075941 -139554209 + AT_rich Low_complexity Low_complexity 1 31 0 201 283 19 0 chr5 60075994 60076047 -139554103 - L2 LINE L2 0 3272 3219 2004 139 10 0 chr5 60076834 60077129 -139553021 + AluSx SINE Alu 7 304 -8 732 204 12 0 chr5 60077310 60077472 -139552678 + MER3 DNA MER1_type 40 203 -6 666 266 101 20 chr5 60077622 60077919 -139552231 - L1ME LINE L1 -301 5820 5500 2044 84 0 11 chr5 60078027 60078289 -139551861 + AluSq SINE Alu 1 259 -54 188 236 55 0 chr5 60078772 60078827 -139551323 + MIR SINE MIR 90 147 -61 2236 116 3 0 chr5 60078829 60079132 -139551018 + AluSq SINE Alu 1 304 -9 1706 211 137 64 chr5 60079161 60079450 -139550700 + MER63C DNA MER1_type 225 491 -569 2403 94 0 0 chr5 60079450 60079759 -139550391 + AluSg1 SINE Alu 1 309 0 1706 211 137 64 chr5 60079759 60080127 -139550023 + MER63C DNA MER1_type 491 930 0 337 260 110 20 chr5 60080127 60080273 -139549877 - L1ME LINE L1 -767 5379 5221 919 181 12 23 chr5 60081128 60081299 -139548851 + MER5B DNA MER1_type 7 175 -3 1680 176 37 3 chr5 60081727 60082023 -139548127 + AluJb SINE Alu 1 306 -6 24 0 0 0 chr5 60082182 60082206 -139547944 + AT_rich Low_complexity Low_complexity 1 24 0 2215 127 32 46 chr5 60082658 60083027 -139547123 + THE1B LTR MaLR 1 364 0 241 263 18 0 chr5 60083326 60083383 -139546767 - L2 LINE L2 0 3272 3215 212 270 108 49 chr5 60085824 60086009 -139544141 + L3 LINE CR1 656 851 -726 310 369 93 23 chr5 60087044 60087440 -139542710 + L3 LINE CR1 1142 1565 -12 370 217 22 22 chr5 60089188 60089280 -139540870 - U2 snRNA snRNA -96 92 1 361 275 45 7 chr5 60089702 60089886 -139540264 + MIR SINE MIR 15 208 -54 287 321 0 28 chr5 60090178 60090284 -139539866 - MIR SINE MIR -112 150 48 333 0 0 0 chr5 60090359 60090396 -139539754 + (TG)n Simple_repeat Simple_repeat 2 38 0 696 186 0 0 chr5 60091976 60092143 -139538007 + (CA)n Simple_repeat Simple_repeat 2 168 0 204 40 0 0 chr5 60092430 60092455 -139537695 + (TCCC)n Simple_repeat Simple_repeat 2 26 0 238 345 103 6 chr5 60092885 60093050 -139537100 + MIR SINE MIR 28 208 -54 1497 187 34 76 chr5 60093687 60094094 -139536056 + MLT1B LTR MaLR 1 390 0 213 278 96 26 chr5 60094348 60094463 -139535687 + MIR SINE MIR 8 130 -132 378 219 0 10 chr5 60095619 60095715 -139534435 + MLT1B LTR MaLR 253 347 -43 234 81 0 0 chr5 60095829 60095866 -139534284 + L2 LINE L2 3277 3313 0 1590 189 14 4 chr5 60095916 60096191 -139533959 + AluJb SINE Alu 5 282 -30 432 37 0 0 chr5 60096213 60096267 -139533883 + (TG)n Simple_repeat Simple_repeat 1 54 0 319 302 32 16 chr5 60098632 60098758 -139531392 + MIR3 SINE MIR 1 128 -80 238 184 0 0 chr5 60100233 60100271 -139529879 + MER5B DNA MER1_type 125 162 -16 186 43 0 0 chr5 60100390 60100413 -139529737 + (T)n Simple_repeat Simple_repeat 1 23 0 1809 112 0 0 chr5 60100501 60100734 -139529416 - AluSc SINE Alu -76 233 1 701 186 9 130 chr5 60101213 60101344 -139528806 + MER5A DNA MER1_type 1 98 -91 2162 96 24 0 chr5 60101344 60101636 -139528514 - AluSx SINE Alu -13 299 1 701 186 9 130 chr5 60101636 60101719 -139528431 + MER5A DNA MER1_type 98 189 0 2946 127 36 4 chr5 60102071 60102575 -139527575 - L1PB2 LINE L1 -1 6150 5631 384 290 59 24 chr5 60102632 60102801 -139527349 + L1ME3A LINE L1 5815 5989 -181 2350 112 0 3 chr5 60102817 60103130 -139527020 - AluSx SINE Alu 0 312 1 380 234 81 0 chr5 60103462 60103573 -139526577 + L1ME3A LINE L1 6051 6170 0 849 157 43 27 chr5 60104746 60104931 -139525219 + L1MA8 LINE L1 6083 6270 -21 294 236 79 11 chr5 60105208 60105297 -139524853 + MER115 DNA AcHobo 1 95 -598 511 315 112 10 chr5 60105353 60105704 -139524446 + MER115 DNA AcHobo 179 573 -120 562 278 33 6 chr5 60105745 60105925 -139524225 + MER115 DNA AcHobo 509 693 0 318 233 44 11 chr5 60105925 60106015 -139524135 + MER5A DNA MER1_type 74 166 -23 270 259 59 0 chr5 60106530 60106615 -139523535 + MER5B DNA MER1_type 12 101 -77 246 32 0 0 chr5 60106620 60106651 -139523499 + (TG)n Simple_repeat Simple_repeat 2 32 0 452 318 74 0 chr5 60109744 60109892 -139520258 + MIR SINE MIR 27 185 -77 2261 112 0 10 chr5 60110424 60110736 -139519414 + AluSx SINE Alu 1 309 -3 333 0 0 0 chr5 60111481 60111518 -139518632 + (CA)n Simple_repeat Simple_repeat 2 38 0 874 193 29 0 chr5 60112232 60112403 -139517747 + MER58A DNA MER1_type 49 224 0 232 330 26 35 chr5 60113274 60113389 -139516761 + L3 LINE CR1 191 304 -1273 555 271 85 5 chr5 60113435 60113634 -139516516 + MIR SINE MIR 4 218 -44 376 342 124 9 chr5 60113702 60113927 -139516223 + L3 LINE CR1 405 655 -922 207 304 54 0 chr5 60114051 60114107 -139516043 + L3 LINE CR1 1430 1488 -89 331 289 66 16 chr5 60114154 60114275 -139515875 - L2 LINE L2 0 3313 3187 188 301 193 0 chr5 60114315 60114398 -139515752 + MIR SINE MIR 51 149 -113 253 247 258 0 chr5 60114424 60114521 -139515629 - L2 LINE L2 0 3313 3192 379 270 71 40 chr5 60115328 60115454 -139514696 - L2 LINE L2 -1 3312 3183 358 182 142 10 chr5 60115601 60115727 -139514423 + MLT1B LTR MaLR 34 178 -196 674 238 32 11 chr5 60115786 60115975 -139514175 + MLT1B LTR MaLR 184 376 -14 190 240 207 0 chr5 60115983 60116104 -139514046 - L2 LINE L2 -165 3148 3003 884 208 16 0 chr5 60116268 60116451 -139513699 + MIR SINE MIR 77 262 0 253 267 0 0 chr5 60116451 60116511 -139513639 + (CTA)n Simple_repeat Simple_repeat 2 61 0 222 367 51 0 chr5 60118002 60118131 -139512019 + MIR SINE MIR 49 184 -64 230 211 0 0 chr5 60118896 60118992 -139511158 + AluJ/monomer SINE Alu 248 300 0 796 235 45 10 chr5 60119393 60119593 -139510557 + MER63A DNA MER1_type 4 210 0 206 170 0 21 chr5 60120122 60120169 -139509981 + T-rich Low_complexity Low_complexity 5 50 0 420 329 120 34 chr5 60121297 60121766 -139508384 + L2 LINE L2 2681 3188 -125 582 228 84 40 chr5 60121775 60122073 -139508077 - MER33 DNA MER1_type 0 324 14 520 256 0 47 chr5 60122095 60122224 -139507926 + L2 LINE L2 3191 3313 0 390 39 0 0 chr5 60124215 60124266 -139505884 - L1PA6 LINE L1 -2 6152 6102 249 83 0 0 chr5 60126928 60126964 -139503186 + (CA)n Simple_repeat Simple_repeat 2 37 0 189 0 0 0 chr5 60129110 60129131 -139501019 + (A)n Simple_repeat Simple_repeat 1 21 0 301 308 47 52 chr5 60129256 60129428 -139500722 - MIR SINE MIR -31 231 61 216 347 0 28 chr5 60130557 60130629 -139499521 + MIR3 SINE MIR 92 161 -47 447 320 20 14 chr5 60132863 60133010 -139497140 + MIR SINE MIR 6 153 -109 533 339 71 0 chr5 60133013 60133196 -139496954 - MER91A DNA MER1_type 0 196 1 29 60 0 0 chr5 60133386 60133436 -139496714 + AT_rich Low_complexity Low_complexity 1 50 0 519 248 55 106 chr5 60133704 60133922 -139496228 + MIR SINE MIR 33 239 -23 255 173 0 0 chr5 60133934 60133986 -139496164 + (CAT)n Simple_repeat Simple_repeat 3 54 0 739 48 19 0 chr5 60134409 60134513 -139495637 + (TCTA)n Simple_repeat Simple_repeat 1 106 0 276 243 0 14 chr5 60134523 60134593 -139495557 + GA-rich Low_complexity Low_complexity 2 70 0 353 194 0 0 chr5 60134989 60135051 -139495099 - L2 LINE L2 -1 3312 3251 313 271 45 58 chr5 60135218 60135373 -139494777 + L2 LINE L2 3161 3313 0 181 0 69 0 chr5 60137195 60137224 -139492926 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 442 289 44 13 chr5 60137584 60137743 -139492407 + L3 LINE CR1 958 1121 -456 477 309 116 45 chr5 60137822 60138025 -139492125 + L2 LINE L2 2839 3026 -287 306 0 0 0 chr5 60138025 60138059 -139492091 + (CA)n Simple_repeat Simple_repeat 1 34 0 477 309 116 45 chr5 60138059 60138295 -139491855 + L2 LINE L2 3026 3309 -4 533 314 141 6 chr5 60138311 60138658 -139491492 + L3 LINE CR1 1122 1515 -62 295 265 64 68 chr5 60138869 60139088 -139491062 + MLT1J LTR MaLR 99 316 -195 283 103 88 44 chr5 60139148 60139216 -139490934 + MLT1L LTR MaLR 545 615 0 383 314 63 95 chr5 60139300 60139977 -139490173 - L2 LINE L2 -4 3268 2623 36 0 0 0 chr5 60140846 60140882 -139489268 + AT_rich Low_complexity Low_complexity 1 36 0 189 245 0 38 chr5 60141677 60141730 -139488420 - MIR SINE MIR -60 148 98 496 257 120 25 chr5 60142002 60142286 -139487864 - L1ME4a LINE L1 -11 6110 5800 399 269 6 72 chr5 60142350 60142430 -139487720 + L2 LINE L2 2899 2964 -308 2018 201 94 69 chr5 60142430 60143068 -139487082 + MLT1E1 LTR MaLR 1 654 0 399 269 6 72 chr5 60143068 60143154 -139486996 + L2 LINE L2 2964 3054 -218 189 171 0 0 chr5 60143260 60143295 -139486855 - MIR SINE MIR -71 137 103 457 360 16 16 chr5 60144166 60144355 -139485795 - MER5A DNA MER1_type 0 189 1 358 245 39 0 chr5 60144600 60144702 -139485448 - Charlie8 DNA MER1_type -2206 211 106 238 204 0 0 chr5 60146272 60146326 -139483824 + L1ME LINE L1 5805 5858 -263 288 172 0 0 chr5 60146446 60146507 -139483643 + L1M3 LINE L1 5414 5474 -697 287 278 31 21 chr5 60148166 60148263 -139481887 + MIR SINE MIR 128 225 -37 303 248 78 100 chr5 60148308 60148559 -139481591 - L2 LINE L2 -309 2963 2719 1678 254 58 6 chr5 60148721 60149217 -139480933 + MLT1F LTR MaLR 17 538 -4 2088 247 86 12 chr5 60149255 60149846 -139480304 + MLT1E1 LTR MaLR 20 654 0 270 326 101 0 chr5 60149846 60149975 -139480175 + MLT1F-int LTR MaLR 1228 1369 -2 2191 215 24 37 chr5 60149985 60150529 -139479621 + MLT1F LTR MaLR 3 539 -3 319 250 120 0 chr5 60151176 60151284 -139478866 - L1ME4a LINE L1 -2 6119 5999 413 263 158 29 chr5 60151659 60152069 -139478081 - L1ME4a LINE L1 -281 5840 5378 268 313 95 47 chr5 60152673 60152884 -139477266 - MIR SINE MIR -30 232 12 * 459 231 150 0 chr5 60152822 60152972 -139477178 - MER5A DNA MER1_type -10 179 4 199 296 28 14 chr5 60153902 60153973 -139476177 - MIR3 SINE MIR -7 201 130 587 180 6 33 chr5 60155620 60155803 -139474347 + GA-rich Low_complexity Low_complexity 3 180 0 186 150 0 0 chr5 60155824 60155864 -139474286 + (CAGG)n Simple_repeat Simple_repeat 2 41 0 2172 97 0 55 chr5 60158636 60158966 -139471184 - AluSx SINE Alu 0 312 1 30 0 0 0 chr5 60160065 60160095 -139470055 + AT_rich Low_complexity Low_complexity 1 30 0 487 230 141 0 chr5 60160295 60160430 -139469720 + MIR SINE MIR 31 184 -78 484 299 21 7 chr5 60160450 60160594 -139469556 + MIR SINE MIR 1 146 -116 275 266 191 27 chr5 60163529 60163717 -139466433 - MIR SINE MIR -6 256 38 977 178 6 6 chr5 60164299 60164473 -139465677 + FRAM SINE Alu 2 175 -1 574 333 70 17 chr5 60165141 60165658 -139464492 + L1MC4a LINE L1 5383 5926 -1882 1246 188 202 38 chr5 60165907 60166327 -139463823 - Charlie1b DNA MER1_type -1 522 34 410 378 31 44 chr5 60166806 60167360 -139462790 - L2 LINE L2 -1 3271 2729 1504 218 181 33 chr5 60168805 60169375 -139460775 + MLT1E1 LTR MaLR 1 654 0 242 309 30 87 chr5 60169564 60169794 -139460356 + L2 LINE L2 2359 2575 -739 297 118 0 0 chr5 60170098 60170149 -139460001 + (CA)n Simple_repeat Simple_repeat 2 52 0 245 62 83 0 chr5 60170283 60170331 -139459819 - L1MB4 LINE L1 -1 6179 6128 228 232 18 0 chr5 60171365 60171421 -139458729 + MER116 DNA Mariner 1 57 -23 1361 193 60 32 chr5 60171754 60172039 -139458111 + AluJo SINE Alu 1 293 -19 2395 84 0 7 chr5 60173005 60173313 -139456837 + AluSc SINE Alu 1 306 -3 2524 87 3 3 chr5 60173593 60173939 -139456211 + L1PA12 LINE L1 5808 6153 -15 276 100 0 0 chr5 60174116 60174156 -139455994 + (ATG)n Simple_repeat Simple_repeat 3 42 0 214 309 54 65 chr5 60174367 60174535 -139455615 + L2 LINE L2 2580 2745 -569 625 124 0 0 chr5 60175217 60175322 -139454828 + L1PA8 LINE L1 6068 6172 0 1476 142 50 56 chr5 60175352 60175654 -139454496 + AluJb SINE Alu 2 301 -11 803 161 0 23 chr5 60176297 60176427 -139453723 - FLAM_C SINE Alu -16 127 1 226 313 87 80 chr5 60176571 60176702 -139453448 + L2 LINE L2 2560 2689 -625 2608 45 0 7 chr5 60176702 60177010 -139453140 - AluY SINE Alu -5 306 1 226 313 87 80 chr5 60177010 60177166 -139452984 + L2 LINE L2 2689 2849 -465 2246 104 0 3 chr5 60177551 60177849 -139452301 - AluSg SINE Alu -13 297 1 1741 155 3 26 chr5 60177917 60178220 -139451930 - AluJo SINE Alu -16 296 1 25 31 0 0 chr5 60179064 60179096 -139451054 + AT_rich Low_complexity Low_complexity 1 32 0 312 408 16 68 chr5 60179512 60179821 -139450329 - L2 LINE L2 -75 3197 2905 1912 155 0 29 chr5 60180573 60180889 -139449261 - AluSx SINE Alu -5 307 1 194 181 0 28 chr5 60181989 60182061 -139448089 + (TCTCTG)n Simple_repeat Simple_repeat 3 72 0 289 217 0 28 chr5 60182068 60182174 -139447976 + (CATATA)n Simple_repeat Simple_repeat 4 106 0 455 310 83 59 chr5 60182323 60182794 -139447356 - L1ME LINE L1 -330 5791 5310 334 359 78 12 chr5 60182887 60183143 -139447007 - L1ME LINE L1 -1237 4909 4637 1734 127 30 4 chr5 60184084 60184351 -139445799 + AluSg SINE Alu 35 308 -2 309 26 0 0 chr5 60185535 60185573 -139444577 + (TG)n Simple_repeat Simple_repeat 2 39 0 251 277 75 69 chr5 60185781 60185940 -139444210 + MIR3 SINE MIR 43 202 -6 24 67 0 0 chr5 60186687 60186732 -139443418 + AT_rich Low_complexity Low_complexity 1 45 0 2179 112 3 10 chr5 60186761 60187065 -139443085 + AluSx SINE Alu 2 303 -9 987 173 0 6 chr5 60187143 60187311 -139442839 + FRAM SINE Alu 1 161 -15 22 0 0 0 chr5 60187721 60187743 -139442407 + AT_rich Low_complexity Low_complexity 1 22 0 309 51 0 0 chr5 60188065 60188104 -139442046 + (CA)n Simple_repeat Simple_repeat 1 39 0 401 282 9 18 chr5 60188492 60188602 -139441548 + MIR SINE MIR 37 145 -63 252 0 0 0 chr5 60189595 60189623 -139440527 + (CA)n Simple_repeat Simple_repeat 1 28 0 333 0 0 0 chr5 60190712 60190749 -139439401 + (CA)n Simple_repeat Simple_repeat 1 37 0 258 95 0 0 chr5 60191169 60191211 -139438939 + (CGG)n Simple_repeat Simple_repeat 2 43 0 211 263 32 32 chr5 60191215 60191310 -139438840 + G-rich Low_complexity Low_complexity 6 100 0 210 150 0 0 chr5 60191496 60191536 -139438614 + (CTG)n Simple_repeat Simple_repeat 3 42 0 430 299 164 10 chr5 60193885 60194086 -139436064 + MIR SINE MIR 31 262 0 211 207 25 157 chr5 60194127 60194208 -139435942 + MER5B DNA MER1_type 1 65 -113 281 275 221 8 chr5 60194208 60194339 -139435811 - MER5A DNA MER1_type 0 189 31 359 247 14 0 chr5 60194364 60194449 -139435701 + MER5B DNA MER1_type 75 167 -22 1626 80 0 9 chr5 60195259 60195485 -139434665 - L1PA6 LINE L1 0 6154 5931 244 277 110 39 chr5 60196082 60196237 -139433913 - L2 LINE L2 -22 3291 3126 204 335 31 47 chr5 60196647 60196838 -139433312 - L2 LINE L2 -1635 1679 1492 400 220 133 27 chr5 60197112 60197262 -139432888 - L2 LINE L2 0 3313 3148 236 240 0 27 chr5 60197263 60197338 -139432812 + (TA)n Simple_repeat Simple_repeat 2 74 0 518 288 173 20 chr5 60197376 60197707 -139432443 - L2 LINE L2 -150 3163 2772 2006 147 3 0 chr5 60197770 60198063 -139432087 + AluSx SINE Alu 1 294 -18 270 136 0 0 chr5 60198074 60198118 -139432032 + (CA)n Simple_repeat Simple_repeat 2 45 0 706 281 132 38 chr5 60198123 60198540 -139431610 + HsTC2 DNA Tc2 230 685 -1213 23 0 0 0 chr5 60198550 60198573 -139431577 + AT_rich Low_complexity Low_complexity 1 23 0 362 342 33 0 chr5 60198906 60199026 -139431124 - MIR SINE MIR -119 143 20 1016 268 140 12 chr5 60199228 60199740 -139430410 + L1ME3 LINE L1 5106 5749 -413 486 0 0 0 chr5 60199740 60199794 -139430356 + (CA)n Simple_repeat Simple_repeat 2 55 0 1016 268 140 12 chr5 60199794 60200028 -139430122 + L1ME3 LINE L1 5749 5952 -210 455 269 181 0 chr5 60200084 60200233 -139429917 - MER5A DNA MER1_type -1 188 13 477 122 0 24 chr5 60201321 60201403 -139428747 - MADE1 DNA Mariner 0 80 1 525 261 85 70 chr5 60201408 60201636 -139428514 - MIR SINE MIR -2 260 4 347 341 15 15 chr5 60201761 60201896 -139428254 + MIR SINE MIR 79 213 -49 22 56 0 0 chr5 60202616 60202652 -139427498 + AT_rich Low_complexity Low_complexity 1 36 0 704 306 56 9 chr5 60203307 60203523 -139426627 + MIR SINE MIR 7 232 -30 300 311 37 30 chr5 60203841 60203976 -139426174 - MIR SINE MIR -6 256 121 934 231 23 27 chr5 60204239 60204460 -139425690 + MER58A DNA MER1_type 4 223 -1 2846 144 92 0 chr5 60204483 60204962 -139425188 + L1PA14 LINE L1 5387 5909 -265 960 85 0 7 chr5 60204960 60205101 -139425049 - L1P4 LINE L1 -635 5526 5387 * 1468 132 0 39 chr5 60205164 60205422 -139424728 + L1PA14 LINE L1 5911 6158 -3 185 420 11 5 chr5 60206877 60207065 -139423085 + L2 LINE L2 2445 2633 -681 405 296 84 34 chr5 60207066 60207212 -139422938 + MER5A DNA MER1_type 2 160 -29 1637 159 42 14 chr5 60207212 60207501 -139422649 - AluJb SINE Alu -15 297 1 405 296 84 34 chr5 60207501 60207533 -139422617 + MER5A DNA MER1_type 160 189 0 187 301 32 21 chr5 60207620 60207713 -139422437 + L2 LINE L2 2726 2819 -495 3730 144 15 66 chr5 60208741 60209469 -139420681 + LTR8 LTR ERV1 1 691 0 23 54 0 0 chr5 60209734 60209771 -139420379 + AT_rich Low_complexity Low_complexity 1 37 0 257 191 0 0 chr5 60210034 60210081 -139420069 + L2 LINE L2 3263 3309 -4 752 311 70 27 chr5 60210507 60210919 -139419231 - L2 LINE L2 0 3313 2884 27 29 0 0 chr5 60211569 60211603 -139418547 + AT_rich Low_complexity Low_complexity 1 34 0 1093 271 195 26 chr5 60211933 60212348 -139417802 - L2 LINE L2 0 3313 2969 465 66 0 0 chr5 60212348 60212409 -139417741 + (TG)n Simple_repeat Simple_repeat 2 62 0 1093 271 195 26 chr5 60212409 60212682 -139417468 - L2 LINE L2 -344 2969 2743 519 17 0 0 chr5 60212682 60212742 -139417408 + (TG)n Simple_repeat Simple_repeat 2 61 0 1093 271 195 26 chr5 60212742 60212917 -139417233 - L2 LINE L2 -570 2743 2306 1980 130 0 54 chr5 60214611 60214926 -139415224 - AluSx SINE Alu -14 298 1 222 404 9 9 chr5 60215301 60215415 -139414735 + MIR SINE MIR 20 133 -75 23 68 0 0 chr5 60215674 60215718 -139414432 + AT_rich Low_complexity Low_complexity 1 44 0 25 51 0 0 chr5 60215904 60215943 -139414207 + AT_rich Low_complexity Low_complexity 1 39 0 1853 261 46 53 chr5 60216212 60216775 -139413375 + MLT1E LTR MaLR 1 559 -34 241 259 0 0 chr5 60217533 60217587 -139412563 + L2 LINE L2 3246 3299 -14 28 29 0 0 chr5 60217844 60217879 -139412271 + AT_rich Low_complexity Low_complexity 1 35 0 910 261 90 0 chr5 60218397 60218525 -139411625 + MIR SINE MIR 5 120 -142 2380 56 3 19 chr5 60218525 60218844 -139411306 + L1PA5 LINE L1 5835 6148 -6 910 261 90 0 chr5 60218844 60218949 -139411201 + MIR SINE MIR 120 259 -3 25 0 0 0 chr5 60219014 60219039 -139411111 + AT_rich Low_complexity Low_complexity 1 25 0 412 309 104 35 chr5 60219367 60219568 -139410582 + L3 LINE CR1 491 705 -872 21945 161 31 11 chr5 60219600 60222718 -139407432 + L1M1 LINE L1 15 3265 -4300 2423 81 0 0 chr5 60222718 60223013 -139407137 + AluY SINE Alu 1 295 -16 21945 161 31 11 chr5 60223013 60224847 -139405303 + L1M1 LINE L1 3265 5062 -2503 1893 124 0 0 chr5 60226160 60226427 -139403723 + AluSx SINE Alu 41 307 -5 272 165 52 10 chr5 60226648 60226745 -139403405 + (TA)n Simple_repeat Simple_repeat 2 102 0 191 36 36 0 chr5 60226897 60226925 -139403225 + (TG)n Simple_repeat Simple_repeat 2 30 0 1290 33 0 7 chr5 60227858 60228011 -139402139 + AluY SINE Alu 154 305 -6 1240 222 72 61 chr5 60228013 60228463 -139401687 + MLT1C LTR MaLR 16 467 0 2110 137 139 24 chr5 60229190 60229516 -139400634 - MSTC LTR MaLR -3 425 47 2426 83 0 10 chr5 60229516 60229828 -139400322 - AluY SINE Alu -2 309 1 2110 137 139 24 chr5 60229828 60229882 -139400268 - MSTC LTR MaLR -381 47 1 463 222 49 118 chr5 60230187 60230390 -139399760 - MIR SINE MIR -6 256 68 378 310 94 21 chr5 60231329 60231521 -139398629 - MIR SINE MIR -20 242 34 180 0 0 0 chr5 60231596 60231616 -139398534 + (TA)n Simple_repeat Simple_repeat 2 21 0 1768 130 65 0 chr5 60231801 60232063 -139398087 - AluSx SINE Alu -5 307 29 325 226 0 0 chr5 60233515 60233577 -139396573 + MER5A DNA MER1_type 9 70 -119 1415 235 0 32 chr5 60233580 60233907 -139396243 - L1PA4 LINE L1 -445 5855 5540 2417 44 0 0 chr5 60233907 60234197 -139395953 + L1PA4 LINE L1 5858 6153 -2 1415 235 0 32 chr5 60234197 60234244 -139395906 - L1MA4 LINE L1 -760 5540 5493 184 214 54 18 chr5 60234409 60234465 -139395685 + MIR SINE MIR 32 89 -119 556 279 77 29 chr5 60234837 60235045 -139395105 - MIR SINE MIR -3 259 42 577 277 67 36 chr5 60235148 60235216 -139394934 - MIR SINE MIR -59 203 139 1176 181 89 78 chr5 60235216 60235586 -139394564 - MLT1A2 LTR MaLR 0 374 1 577 277 67 36 chr5 60235586 60235712 -139394438 - MIR SINE MIR -123 139 3 612 350 45 24 chr5 60236699 60237036 -139393114 + MLT1I LTR MaLR 16 359 -50 756 300 65 61 chr5 60237153 60237673 -139392477 - L2 LINE L2 0 3313 2733 632 344 81 22 chr5 60238109 60238566 -139391584 - L2 LINE L2 -593 2721 2238 650 238 89 67 chr5 60238979 60239434 -139390716 + L1MC5 LINE L1 7405 7873 -88 418 97 83 14 chr5 60239434 60239506 -139390644 + MADE1 DNA Mariner 1 77 -3 650 238 89 67 chr5 60239506 60239546 -139390604 + L1MC5 LINE L1 7873 7911 -50 211 257 7 146 chr5 60240844 60240988 -139389162 - L3 LINE CR1 -9 1568 1445 529 212 9 9 chr5 60240995 60241108 -139389042 - L2 LINE L2 -10 3303 3191 192 319 55 11 chr5 60241151 60241242 -139388908 - L2 LINE L2 -3 3310 3216 265 321 120 33 chr5 60241247 60241431 -139388719 - L3 LINE CR1 -187 1390 1191 322 258 31 25 chr5 60241544 60241675 -139388475 - Charlie8 DNA MER1_type -2264 153 5 1040 364 95 29 chr5 60241679 60242574 -139387576 - L3 LINE CR1 -384 1193 240 556 208 115 47 chr5 60242585 60242777 -139387373 - L2 LINE L2 0 3313 3109 1071 213 34 4 chr5 60242788 60243023 -139387127 - MER95 LTR ERV -9 422 181 197 412 0 0 chr5 60243252 60243354 -139386796 - MIR3 SINE MIR -3 205 104 211 375 21 0 chr5 60243567 60243663 -139386487 + MIR3 SINE MIR 104 201 -7 1828 156 31 28 chr5 60243864 60244243 -139385907 + MLT2A2 LTR ERVL 1 308 -145 1294 68 0 0 chr5 60244338 60244500 -139385650 + MLT2A2 LTR ERVL 292 453 0 511 328 45 11 chr5 60245122 60245299 -139384851 + MER5A DNA MER1_type 7 189 0 576 259 90 0 chr5 60245338 60245539 -139384611 + L1ME4a LINE L1 5676 5894 -227 22 0 0 0 chr5 60246056 60246078 -139384072 + AT_rich Low_complexity Low_complexity 1 22 0 314 239 57 23 chr5 60246328 60246416 -139383734 + L1MC4 LINE L1 6615 6705 -1337 276 264 14 0 chr5 60246452 60246524 -139383626 + MLT1J1 LTR MaLR 42 114 -332 446 302 38 19 chr5 60246665 60246824 -139383326 + MLT1J2 LTR MaLR 263 424 -26 285 364 85 23 chr5 60246904 60247033 -139383117 - L2 LINE L2 -15 3257 3121 2388 99 3 3 chr5 60247328 60247641 -139382509 - AluSq SINE Alu 0 313 1 269 236 14 28 chr5 60247843 60247915 -139382235 + L2 LINE L2 3201 3271 -1 291 242 97 85 chr5 60249839 60250004 -139380146 - MIR SINE MIR -62 200 34 373 349 45 31 chr5 60250228 60250580 -139379570 + L1M4 LINE L1 4116 4472 -1674 559 339 25 62 chr5 60251020 60251377 -139378773 + L1M3d LINE L1 462 805 -5498 2773 236 76 25 chr5 60251577 60252693 -139377457 + L1M3d LINE L1 777 1856 -4522 25 0 0 0 chr5 60252724 60252749 -139377401 + AT_rich Low_complexity Low_complexity 1 25 0 418 296 293 14 chr5 60252883 60253352 -139376798 + L1MA9 LINE L1 1847 2410 -5076 1622 265 49 46 chr5 60253358 60254278 -139375872 + L1MA9 LINE L1 2826 3747 -3818 * 7649 186 54 19 chr5 60254252 60255451 -139374699 + L1MA9 LINE L1 4872 6152 -1413 2379 101 0 0 chr5 60255451 60255758 -139374392 + AluSg1 SINE Alu 1 307 -2 7649 186 54 19 chr5 60255758 60256287 -139373863 + L1MA9 LINE L1 6152 6661 -904 1193 192 128 26 chr5 60256287 60256599 -139373551 + MER2 DNA MER2_type 2 345 0 5232 172 30 12 chr5 60256607 60257491 -139372659 + L1MA9 LINE L1 6676 7582 -149 240 111 0 0 chr5 60257491 60257527 -139372623 + (CA)n Simple_repeat Simple_repeat 1 36 0 5232 172 30 12 chr5 60257527 60257680 -139372470 + L1MA9 LINE L1 7582 7731 0 341 231 85 15 chr5 60257707 60257837 -139372313 + L1MC5 LINE L1 7301 7439 -522 3463 275 92 45 chr5 60258219 60259628 -139370522 - L1M4b LINE L1 -5374 1485 11 398 333 41 53 chr5 60259887 60260166 -139369984 - L2 LINE L2 -1294 2020 1746 650 190 130 45 chr5 60260166 60260366 -139369784 + MER20 DNA MER1_type 2 218 -1 398 333 41 53 chr5 60260366 60260500 -139369650 - L2 LINE L2 -1568 1746 1612 273 272 132 35 chr5 60260526 60260640 -139369510 - MIR SINE MIR -105 157 33 2299 84 3 0 chr5 60261689 60261997 -139368153 - AluY SINE Alu -1 310 2 284 314 29 0 chr5 60262097 60262202 -139367948 + CT-rich Low_complexity Low_complexity 4 111 0 2237 108 0 0 chr5 60265053 60265340 -139364810 + AluSg SINE Alu 1 287 -23 304 348 35 17 chr5 60266102 60266217 -139363933 + MIR3 SINE MIR 7 123 -85 322 235 76 4 chr5 60266232 60266364 -139363786 - MIR SINE MIR -4 258 65 207 273 0 0 chr5 60266407 60266451 -139363699 + (TG)n Simple_repeat Simple_repeat 1 44 0 2456 71 0 7 chr5 60266476 60266785 -139363365 + AluY SINE Alu 1 307 -4 29 60 0 0 chr5 60267698 60267748 -139362402 + AT_rich Low_complexity Low_complexity 1 50 0 227 237 0 17 chr5 60267860 60267919 -139362231 + (TAAA)n Simple_repeat Simple_repeat 2 59 0 370 269 29 19 chr5 60268320 60268424 -139361726 - MIR SINE MIR -9 253 149 1968 158 27 21 chr5 60269281 60269654 -139360496 + THE1C LTR MaLR 1 375 0 1140 288 124 42 chr5 60269797 60270345 -139359805 + MLT1G1 LTR MaLR 3 595 0 2288 99 7 0 chr5 60271246 60271550 -139358600 - AluSq SINE Alu -7 306 1 187 243 54 54 chr5 60272121 60272195 -139357955 + MIR SINE MIR 183 256 -6 23 0 0 0 chr5 60272233 60272256 -139357894 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr5 60274526 60274552 -139355598 + AT_rich Low_complexity Low_complexity 1 26 0 6456 175 23 19 chr5 60275899 60277905 -139352245 + L1PA16 LINE L1 3870 5887 -279 198 0 0 0 chr5 60277905 60277927 -139352223 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 6456 175 23 19 chr5 60277927 60278209 -139351941 + L1PA16 LINE L1 5887 6166 0 893 207 0 94 chr5 60278312 60278415 -139351735 - L2 LINE L2 0 3313 3202 808 234 52 111 chr5 60278415 60278911 -139351239 + MLT1C LTR MaLR 1 467 0 893 207 0 94 chr5 60278911 60279073 -139351077 - L2 LINE L2 -111 3202 3073 565 255 0 21 chr5 60279117 60279262 -139350888 + MER69 DNA AcHobo 1 142 -1084 2583 204 99 52 chr5 60279290 60280268 -139349882 + MER69 DNA AcHobo 1480 2503 -23 21 0 0 0 chr5 60281597 60281618 -139348532 + AT_rich Low_complexity Low_complexity 1 21 0 508 295 16 16 chr5 60281911 60282104 -139348046 + L2 LINE L2 2509 2701 -613 1263 255 64 6 chr5 60282307 60282664 -139347486 + L2 LINE L2 1401 1778 -1536 345 285 16 16 chr5 60282806 60282929 -139347221 + L2 LINE L2 3190 3312 -1 510 232 6 2 chr5 60283082 60283263 -139346887 - MER58B DNA MER1_type 0 341 2 5238 132 40 27 chr5 60284606 60285303 -139344847 + L1PA16 LINE L1 5153 5865 -301 2435 88 3 0 chr5 60285303 60285611 -139344539 - AluSp SINE Alu -4 309 1 5238 132 40 27 chr5 60285611 60285916 -139344234 + L1PA16 LINE L1 5865 6165 -1 446 340 20 0 chr5 60286066 60286219 -139343931 + MIR SINE MIR 81 236 -26 2560 90 27 8 chr5 60286889 60287257 -139342893 + THE1C LTR MaLR 1 375 0 7712 18 1 0 chr5 60287541 60288710 -139341440 + L1PA3 LINE L1 4998 6167 0 237 163 0 0 chr5 60288712 60288761 -139341389 + GA-rich Low_complexity Low_complexity 2 50 0 230 236 114 87 chr5 60289158 60289412 -139340738 - LTR67 LTR ERVL -10 547 287 1536 271 53 13 chr5 60289834 60290306 -139339844 + MER110 LTR ERV1 1 491 0 247 224 15 45 chr5 60290445 60290512 -139339638 + L2 LINE L2 3244 3308 -5 26 30 0 0 chr5 60290516 60290549 -139339601 + AT_rich Low_complexity Low_complexity 1 33 0 28 79 0 0 chr5 60291684 60291747 -139338403 + AT_rich Low_complexity Low_complexity 1 63 0 572 378 118 14 chr5 60292102 60293027 -139337123 + L2 LINE L2 189 1209 -2105 182 200 67 17 chr5 60293119 60293179 -139336971 + L2 LINE L2 2902 2964 -308 332 342 19 31 chr5 60293304 60293465 -139336685 + L2 LINE L2 3114 3272 0 15557 128 15 12 chr5 60293575 60293604 -139336546 + Tigger1 DNA MER2_type 1 28 -2390 2077 169 76 0 chr5 60293604 60294000 -139336150 + MSTB LTR MaLR 1 426 0 15557 128 15 12 chr5 60294000 60294845 -139335305 + Tigger1 DNA MER2_type 28 869 -1549 326 174 0 0 chr5 60294845 60294914 -139335236 + L1PA16 LINE L1 6096 6164 -2 15557 128 15 12 chr5 60294914 60296449 -139333701 + Tigger1 DNA MER2_type 869 2418 0 39 60 0 0 chr5 60296631 60296698 -139333452 + AT_rich Low_complexity Low_complexity 1 67 0 198 0 0 0 chr5 60296749 60296771 -139333379 + (TG)n Simple_repeat Simple_repeat 2 23 0 1998 138 0 0 chr5 60298297 60298609 -139331541 + AluSx SINE Alu 1 312 0 413 252 107 50 chr5 60300303 60300462 -139329688 - MIR SINE MIR -82 180 13 1681 219 82 17 chr5 60300806 60301272 -139328878 + L1ME2 LINE L1 5488 5983 -181 2265 99 0 10 chr5 60302232 60302546 -139327604 - AluY SINE Alu 0 311 1 1402 209 0 4 chr5 60302824 60303063 -139327087 + MER8 DNA MER2_type 2 239 0 1501 182 7 14 chr5 60303184 60303459 -139326691 - AluJb SINE Alu -39 273 1 2490 212 36 25 chr5 60303708 60304264 -139325886 + MER68 LTR ERV1 1 562 0 263 143 0 18 chr5 60306166 60306222 -139323928 + (TA)n Simple_repeat Simple_repeat 1 55 0 1084 160 45 13 chr5 60306236 60306508 -139323642 - MER7A DNA MER2_type 0 346 1 316 264 144 36 chr5 60306939 60307106 -139323044 + MIR SINE MIR 41 225 -37 440 309 80 6 chr5 60307267 60307429 -139322721 + MIR SINE MIR 89 262 0 374 336 129 9 chr5 60307751 60307916 -139322234 - MIR SINE MIR 0 262 60 568 218 18 0 chr5 60307916 60308026 -139322124 - MER81 DNA DNA -2 112 1 374 336 129 9 chr5 60308026 60308092 -139322058 - MIR SINE MIR -202 60 3 9096 208 35 38 chr5 60408906 60412716 -139217434 + L1MA4 LINE L1 2041 5956 -1609 5558 156 44 9 chr5 60412715 60413406 -139216744 + L1MA4 LINE L1 6488 7229 -490 * 2703 29 3 0 chr5 60413406 60413716 -139216434 + AluY SINE Alu 1 311 0 5558 156 44 9 chr5 60413716 60414222 -139215928 + L1MA4 LINE L1 7229 7716 -3 28 29 0 0 chr5 60415343 60415378 -139214772 + AT_rich Low_complexity Low_complexity 1 35 0 25 51 0 0 chr5 60415478 60415517 -139214633 + AT_rich Low_complexity Low_complexity 1 39 0 287 233 113 23 chr5 60415523 60415656 -139214494 + L1ME4a LINE L1 5974 6118 -3 278 265 69 59 chr5 60415722 60415824 -139214326 + MIR SINE MIR 25 127 -135 1363 205 104 86 chr5 60416064 60416508 -139213642 + MLT1C LTR MaLR 3 454 -13 22 70 0 0 chr5 60416651 60416694 -139213456 + AT_rich Low_complexity Low_complexity 1 43 0 6508 71 0 3 chr5 60416699 60417858 -139212292 - L1PA7 LINE L1 -11 6143 5028 1315 88 6 0 chr5 60417858 60418039 -139212111 + L1P LINE L1 4799 4980 -1166 23 54 0 0 chr5 60418045 60418082 -139212068 + AT_rich Low_complexity Low_complexity 1 37 0 207 0 0 0 chr5 60418904 60418927 -139211223 + (TG)n Simple_repeat Simple_repeat 2 24 0 805 133 28 0 chr5 60419808 60419951 -139210199 + L1MA4 LINE L1 6019 6165 -135 * 2810 191 35 2 chr5 60419950 60420541 -139209609 - L1 LINE L1 -1518 5330 4720 1649 248 15 4 chr5 60420542 60421010 -139209140 - L1 LINE L1 -4192 2657 2185 1465 262 75 59 chr5 60421179 60422050 -139208100 + L1MC4a LINE L1 5283 6167 -1641 274 206 0 41 chr5 60422057 60422130 -139208020 + GA-rich Low_complexity Low_complexity 4 73 0 23 0 0 0 chr5 60423493 60423516 -139206634 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 60423723 60423746 -139206404 + AT_rich Low_complexity Low_complexity 1 23 0 186 118 0 0 chr5 60423849 60423883 -139206267 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 511 140 37 19 chr5 60423890 60423997 -139206153 - L1PA16 LINE L1 0 6166 6058 207 209 0 0 chr5 60424602 60424645 -139205505 + A-rich Low_complexity Low_complexity 1 43 0 43644 42 1 1 chr5 60425509 60431663 -139198487 + L1PA3 LINE L1 2 6155 0 6216 141 22 4 chr5 60431751 60432945 -139197205 + L1MA5 LINE L1 5083 6295 -5 26 0 0 0 chr5 60433258 60433284 -139196866 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 60434726 60434747 -139195403 + AT_rich Low_complexity Low_complexity 1 21 0 387 332 50 46 chr5 60435248 60435486 -139194664 + L2 LINE L2 1487 1725 -1589 249 232 0 0 chr5 60436469 60436538 -139193612 + (TATATG)n Simple_repeat Simple_repeat 4 72 0 366 61 0 0 chr5 60436571 60436620 -139193530 + (TGGA)n Simple_repeat Simple_repeat 3 51 0 387 341 67 14 chr5 60437113 60437339 -139192811 - MIR SINE MIR -3 259 18 24 0 0 0 chr5 60438728 60438752 -139191398 + AT_rich Low_complexity Low_complexity 1 24 0 397 333 74 35 chr5 60439384 60439446 -139190704 + L2 LINE L2 1703 1761 -1553 270 56 0 0 chr5 60439446 60439482 -139190668 + (CA)n Simple_repeat Simple_repeat 2 37 0 397 333 74 35 chr5 60439482 60439785 -139190365 + L2 LINE L2 1761 2082 -1232 315 0 0 0 chr5 60440200 60440235 -139189915 + (TG)n Simple_repeat Simple_repeat 2 36 0 315 314 5 96 chr5 60440382 60440570 -139189580 + MER5A DNA MER1_type 17 187 -2 762 258 77 10 chr5 60441158 60441352 -139188798 + MIR SINE MIR 31 237 -25 22 56 0 0 chr5 60441413 60441449 -139188701 + AT_rich Low_complexity Low_complexity 1 36 0 236 286 50 68 chr5 60441462 60441623 -139188527 - L2 LINE L2 -1021 2293 2136 3122 86 7 31 chr5 60442438 60442893 -139187257 + MLT2A1 LTR ERVL 1 444 0 2238 123 14 8 chr5 60443005 60443356 -139186794 - THE1A LTR MaLR 0 355 3 11438 97 7 1 chr5 60443358 60444929 -139185221 - THE1A-int LTR MaLR 0 1580 1 2317 124 6 8 chr5 60444929 60445285 -139184865 - THE1A LTR MaLR 0 355 1 2362 269 234 11 chr5 60445957 60447081 -139183069 + L2 LINE L2 1245 2619 -695 387 297 68 8 chr5 60447090 60447208 -139182942 + LTR16A1 LTR ERVL 1 125 -332 216 111 0 0 chr5 60447225 60447261 -139182889 + (GA)n Simple_repeat Simple_repeat 1 36 0 471 289 52 0 chr5 60447289 60447424 -139182726 + L2 LINE L2 3172 3313 0 237 304 25 25 chr5 60448427 60448506 -139181644 - L2 LINE L2 -12 3260 3182 1066 329 105 41 chr5 60448747 60449720 -139180430 - L2 LINE L2 -346 2968 1934 241 265 44 0 chr5 60449976 60450044 -139180106 + MLT1J2 LTR MaLR 5 75 -375 524 286 43 43 chr5 60450146 60450356 -139179794 + MLT1J2 LTR MaLR 241 450 0 243 333 16 0 chr5 60451178 60451241 -139178909 - MER45 DNA AcHobo -1517 64 1 2160 162 19 3 chr5 60451516 60451875 -139178275 + MLT1A1 LTR MaLR 1 365 0 262 206 55 0 chr5 60452572 60452645 -139177505 - HAL1 LINE L1 -354 2153 2077 1125 258 148 22 chr5 60452988 60453433 -139176717 + MLT1H LTR MaLR 40 540 -9 21 36 0 0 chr5 60454297 60454325 -139175825 + AT_rich Low_complexity Low_complexity 1 28 0 932 83 0 0 chr5 60454388 60454508 -139175642 + AluSg/x SINE Alu 174 293 -17 466 241 35 26 chr5 60454728 60454844 -139175306 + MIR3 SINE MIR 53 169 -39 22 0 0 0 chr5 60454956 60454978 -139175172 + AT_rich Low_complexity Low_complexity 1 22 0 957 127 0 0 chr5 60454978 60455112 -139175038 - AluSg/x SINE Alu -23 289 156 215 271 0 17 chr5 60455215 60455274 -139174876 + L2 LINE L2 3211 3268 -4 316 268 48 107 chr5 60455284 60455452 -139174698 - L3 LINE CR1 -81 1496 1339 1318 190 127 36 chr5 60455468 60455853 -139174297 + Charlie4a DNA MER1_type 2 350 -1611 1454 184 19 41 chr5 60455853 60456169 -139173981 + AluJo SINE Alu 1 309 -3 1793 187 42 3 chr5 60456177 60456508 -139173642 + MER2 DNA MER2_type 1 344 0 1318 190 127 36 chr5 60456508 60456529 -139173621 + Charlie4a DNA MER1_type 356 455 -53 1419 221 111 0 chr5 60456682 60457007 -139173143 + MLT1A1 LTR MaLR 5 365 0 353 239 68 26 chr5 60457450 60457567 -139172583 - MER103 DNA DNA -44 122 1 324 255 110 123 chr5 60457644 60457954 -139172196 - L3 LINE CR1 -494 1083 778 1828 137 7 7 chr5 60457954 60458224 -139171926 - AluSx SINE Alu -13 299 30 251 259 52 82 chr5 60458292 60458427 -139171723 + MLT1J LTR MaLR 3 133 -378 5947 93 11 4 chr5 60458432 60459893 -139170257 - L1PA11 LINE L1 -1 6173 4686 257 284 49 0 chr5 60459921 60460002 -139170148 - L3 LINE CR1 -886 691 607 27 0 0 0 chr5 60461402 60461429 -139168721 + AT_rich Low_complexity Low_complexity 1 27 0 235 36 0 0 chr5 60461889 60461917 -139168233 + MER103 DNA DNA 3 30 -136 187 337 158 0 chr5 60461979 60462074 -139168076 - MIR3 SINE MIR 0 208 99 247 175 16 16 chr5 60462148 60462211 -139167939 + GA-rich Low_complexity Low_complexity 2 64 0 416 192 10 0 chr5 60463823 60463922 -139166228 + GA-rich Low_complexity Low_complexity 2 101 0 361 282 64 0 chr5 60463945 60464055 -139166095 - MIR SINE MIR -48 214 98 27 62 0 0 chr5 60464598 60464646 -139165504 + AT_rich Low_complexity Low_complexity 1 48 0 506 251 34 50 chr5 60465127 60465242 -139164908 - MER5B DNA MER1_type 0 178 66 510 17 0 0 chr5 60465242 60465301 -139164849 + (TG)n Simple_repeat Simple_repeat 2 60 0 506 251 34 50 chr5 60465301 60465364 -139164786 - MER5B DNA MER1_type -112 66 3 209 316 83 48 chr5 60466339 60466507 -139163643 + L2 LINE L2 3098 3271 -1 1984 132 3 3 chr5 60467572 60467876 -139162274 + AluSx SINE Alu 3 306 -6 184 321 0 54 chr5 60467888 60467944 -139162206 + L2 LINE L2 3203 3255 -17 1603 135 83 29 chr5 60468236 60468682 -139161468 + L1M2 LINE L1 5114 5569 -722 1760 236 58 50 chr5 60469178 60469716 -139160434 - MLT1F LTR MaLR 0 542 1 900 230 147 45 chr5 60469896 60470209 -139159941 - MER2 DNA MER2_type 0 345 1 1627 216 96 14 chr5 60470797 60471163 -139158987 - MSTD LTR MaLR 0 396 1 245 138 0 50 chr5 60471400 60471480 -139158670 + (TA)n Simple_repeat Simple_repeat 1 76 0 422 95 32 84 chr5 60471496 60471686 -139158464 + (TA)n Simple_repeat Simple_repeat 1 180 0 213 253 97 84 chr5 60471885 60472039 -139158111 + MIR SINE MIR 48 203 -59 429 159 0 0 chr5 60472885 60472948 -139157202 - AluS SINE Alu -247 63 1 6053 181 39 27 chr5 60472950 60474010 -139156140 - L1 LINE L1 -1535 4611 3529 2462 82 0 0 chr5 60474010 60474315 -139155835 + AluY SINE Alu 1 305 -6 6053 181 39 27 chr5 60474315 60474605 -139155545 - L1 LINE L1 -2617 3529 3244 4774 175 22 1 chr5 60474598 60475671 -139154479 + L1MB1 LINE L1 5072 6168 0 * 2068 123 3 0 chr5 60475919 60476212 -139153938 - AluSg SINE Alu -16 294 1 3034 220 42 40 chr5 60476215 60477128 -139153022 - L1ME3A LINE L1 -3 6167 5254 297 221 0 59 chr5 60477217 60477285 -139152865 - L2 LINE L2 -4 3309 3246 21 0 0 0 chr5 60477305 60477326 -139152824 + AT_rich Low_complexity Low_complexity 1 21 0 564 262 165 26 chr5 60478243 60478746 -139151404 - L1ME4a LINE L1 -1 6120 5548 777 263 109 15 chr5 60478934 60479208 -139150942 - L2 LINE L2 0 3313 3014 315 219 9 26 chr5 60479487 60479601 -139150549 + CT-rich Low_complexity Low_complexity 1 112 0 393 228 53 35 chr5 60479659 60479757 -139150393 + MIR SINE MIR 137 239 -23 6519 136 34 52 chr5 60479757 60480193 -139149957 - Tigger3b DNA MER2_type -1797 1231 789 2355 67 0 22 chr5 60480193 60480507 -139149643 - AluY SINE Alu -4 307 1 6519 136 34 52 chr5 60480507 60481324 -139148826 - Tigger3b DNA MER2_type -2239 789 1 393 228 53 35 chr5 60481324 60481339 -139148811 + MIR SINE MIR 239 252 -10 2385 128 57 31 chr5 60481574 60481996 -139148154 + Tigger2a DNA MER2_type 1 433 -1 373 349 0 24 chr5 60483455 60483581 -139146569 - MIR3 SINE MIR -21 187 65 570 300 6 28 chr5 60484212 60484392 -139145758 + MER5A DNA MER1_type 14 189 0 24 0 0 0 chr5 60485766 60485790 -139144360 + AT_rich Low_complexity Low_complexity 1 24 0 21 82 0 0 chr5 60485835 60485884 -139144266 + AT_rich Low_complexity Low_complexity 1 49 0 1875 179 45 36 chr5 60486393 60486899 -139143251 - L1MA8 LINE L1 0 7710 7112 * 2161 175 12 12 chr5 60486898 60487310 -139142840 - L1MA8 LINE L1 -1246 6319 5908 41 36 0 0 chr5 60487329 60487384 -139142766 + AT_rich Low_complexity Low_complexity 1 55 0 1051 232 57 18 chr5 60487387 60487730 -139142420 - L1MA8 LINE L1 -3867 3698 3343 1440 78 0 0 chr5 60487731 60487931 -139142219 - AluY SINE Alu 0 301 102 3867 254 40 49 chr5 60487947 60488900 -139141250 - L1MA8 LINE L1 -4174 3391 2454 2188 27 8 4 chr5 60488900 60489163 -139140987 - AluY SINE Alu -4 307 44 3867 254 40 49 chr5 60489163 60489724 -139140426 - L1MA8 LINE L1 -5111 2454 1890 1603 167 92 9 chr5 60490177 60490494 -139139656 + MER2 DNA MER2_type 2 344 0 365 252 49 41 chr5 60491830 60491953 -139138197 - MIR SINE MIR -39 223 100 186 325 13 39 chr5 60492115 60492192 -139137958 + MIR SINE MIR 123 197 -65 243 209 127 177 chr5 60493629 60493740 -139136410 + MIR SINE MIR 108 210 -52 245 0 89 0 chr5 60493740 60493785 -139136365 + (TA)n Simple_repeat Simple_repeat 2 50 0 243 209 127 177 chr5 60493785 60493831 -139136319 + MIR SINE MIR 210 257 -5 315 0 0 0 chr5 60493904 60493939 -139136211 + (CA)n Simple_repeat Simple_repeat 2 36 0 288 301 150 0 chr5 60494818 60494951 -139135199 + MIR SINE MIR 12 164 -98 271 322 82 65 chr5 60495428 60495965 -139134185 - L2 LINE L2 -702 2612 2067 2495 260 55 25 chr5 60496310 60497477 -139132673 - L1MCb LINE L1 -4792 2149 938 630 320 59 13 chr5 60497688 60498078 -139132072 - L1MCb LINE L1 -5986 437 30 21 0 0 0 chr5 60499067 60499088 -139131062 + AT_rich Low_complexity Low_complexity 1 21 0 303 333 68 30 chr5 60499355 60499487 -139130663 - MIR3 SINE MIR -11 197 61 225 416 31 6 chr5 60499730 60499891 -139130259 - L3b LINE CR1 -111 1472 1308 22 56 0 0 chr5 60502180 60502216 -139127934 + AT_rich Low_complexity Low_complexity 1 36 0 255 302 198 0 chr5 60502228 60502314 -139127836 + L2 LINE L2 3161 3263 -9 23 54 0 0 chr5 60503534 60503571 -139126579 + AT_rich Low_complexity Low_complexity 1 37 0 1226 116 6 0 chr5 60504069 60504241 -139125909 + AluSg/x SINE Alu 81 253 -59 2360 64 0 7 chr5 60504241 60504539 -139125611 + AluY SINE Alu 7 302 -9 1653 191 24 38 chr5 60504552 60504924 -139125226 + MLT1A2 LTR MaLR 4 370 -4 275 340 27 20 chr5 60505009 60505156 -139124994 - L3 LINE CR1 -1 1576 1429 413 341 97 14 chr5 60509411 60509628 -139120522 + MIR SINE MIR 7 241 -21 388 294 61 18 chr5 60509805 60509968 -139120182 - LTR33 LTR ERVL -2 519 350 444 249 58 46 chr5 60510089 60510262 -139119888 - LTR33 LTR ERVL -338 183 9 382 314 109 23 chr5 60510333 60510508 -139119642 - MIR SINE MIR -71 191 2 211 294 12 38 chr5 60510975 60511138 -139119012 + MIR SINE MIR 16 198 -64 267 256 39 0 chr5 60511405 60511483 -139118667 - L2 LINE L2 0 3313 3233 235 322 0 0 chr5 60512211 60512270 -139117880 - MIR SINE MIR -125 137 79 2103 136 24 32 chr5 60512904 60513280 -139116870 + THE1C LTR MaLR 1 373 -2 2052 121 3 14 chr5 60513355 60513644 -139116506 + AluSx SINE Alu 3 288 -24 741 311 112 6 chr5 60513798 60514448 -139115702 + L1ME4a LINE L1 5347 6086 -35 2592 35 6 6 chr5 60515027 60515338 -139114812 + AluY SINE Alu 1 311 0 330 307 138 31 chr5 60515615 60516071 -139114079 + L2 LINE L2 1612 2116 -1198 251 347 77 29 chr5 60516102 60516272 -139113878 - MER5A DNA MER1_type 0 189 12 188 248 87 122 chr5 60516566 60516820 -139113330 + L2 LINE L2 2816 3060 -212 490 291 25 55 chr5 60517210 60517409 -139112741 - L2 LINE L2 -4 3268 3076 962 32 0 8 chr5 60518649 60518772 -139111378 + (TAGA)n Simple_repeat Simple_repeat 2 123 0 335 338 22 40 chr5 60520060 60520288 -139109862 + MIR SINE MIR 39 262 0 725 302 10 0 chr5 60521741 60521943 -139108207 - MIR SINE MIR -1 261 58 309 336 8 23 chr5 60522431 60522562 -139107588 + L1ME4a LINE L1 3810 3938 -2208 227 319 99 46 chr5 60522619 60522942 -139107208 + L1P LINE L1 4021 4360 -1786 425 340 86 28 chr5 60523416 60523707 -139106443 + L1ME4a LINE L1 4751 5058 -1088 1502 182 45 14 chr5 60523818 60524104 -139106046 - AluJb SINE Alu -17 295 1 345 299 181 45 chr5 60524215 60524621 -139105529 + L1ME4a LINE L1 5268 5618 -503 2222 98 7 0 chr5 60524621 60524908 -139105242 - AluSq SINE Alu -24 289 1 345 299 181 45 chr5 60524908 60525231 -139104919 + L1ME4a LINE L1 5618 6096 -25 21 36 0 0 chr5 60525579 60525607 -139104543 + AT_rich Low_complexity Low_complexity 1 28 0 648 97 48 7 chr5 60525808 60525953 -139104197 + (TCTA)n Simple_repeat Simple_repeat 4 154 0 301 354 72 30 chr5 60526100 60526337 -139103813 - MIR SINE MIR -11 251 5 729 308 62 8 chr5 60526382 60526622 -139103528 + MIR SINE MIR 6 258 -4 1918 139 23 26 chr5 60527245 60527548 -139102602 + AluSx SINE Alu 5 306 -6 683 309 40 74 chr5 60529631 60529984 -139100166 - L2 LINE L2 -1 3312 2972 291 54 0 0 chr5 60530810 60530847 -139099303 + (T)n Simple_repeat Simple_repeat 1 37 0 270 231 19 9 chr5 60531311 60531419 -139098731 + GA-rich Low_complexity Low_complexity 2 110 0 307 273 50 30 chr5 60533098 60533197 -139096953 - L1MC4 LINE L1 -1329 6713 6613 34 55 0 0 chr5 60533211 60533266 -139096884 + AT_rich Low_complexity Low_complexity 1 55 0 1157 277 86 66 chr5 60533873 60534432 -139095718 + MLT1K LTR MaLR 18 587 -1 21 36 0 0 chr5 60535258 60535286 -139094864 + AT_rich Low_complexity Low_complexity 1 28 0 848 208 52 6 chr5 60537283 60537456 -139092694 + MER5A DNA MER1_type 7 187 -2 259 337 0 22 chr5 60537979 60538068 -139092082 + MLT1K LTR MaLR 3 89 -499 2057 212 35 16 chr5 60538082 60538658 -139091492 + L1ME3 LINE L1 2138 2724 -3422 1906 182 36 3 chr5 60538683 60539068 -139091082 + L1MB3 LINE L1 5772 6169 -14 2157 260 100 26 chr5 60539154 60540149 -139090001 + L1ME3 LINE L1 5094 6158 -4 21 36 0 0 chr5 60540556 60540584 -139089566 + AT_rich Low_complexity Low_complexity 1 28 0 390 298 9 9 chr5 60541030 60541144 -139089006 - MIR3 SINE MIR -12 196 83 187 238 206 0 chr5 60541418 60541481 -139088669 + MER5C DNA MER1_type 1 76 -248 754 208 17 17 chr5 60542047 60542225 -139087925 - MER5B DNA MER1_type 0 178 1 352 282 168 38 chr5 60542474 60542790 -139087360 + L1ME4a LINE L1 5513 5869 -252 195 139 0 0 chr5 60542797 60542833 -139087317 + (CA)n Simple_repeat Simple_repeat 1 36 0 29 28 0 0 chr5 60542947 60542983 -139087167 + AT_rich Low_complexity Low_complexity 1 36 0 1453 208 136 21 chr5 60543124 60543595 -139086555 - L1ME2 LINE L1 0 6164 5640 1246 230 46 78 chr5 60543596 60543966 -139086184 + MLT1F LTR MaLR 1 358 -184 2142 130 3 13 chr5 60594465 60594772 -139035378 + AluSx SINE Alu 1 304 -8 999 284 135 19 chr5 60595347 60595762 -139034388 - L2 LINE L2 0 3313 2851 29 94 0 0 chr5 60596340 60596425 -139033725 + AT_rich Low_complexity Low_complexity 1 85 0 22 0 0 0 chr5 60596857 60596879 -139033271 + AT_rich Low_complexity Low_complexity 1 22 0 417 287 84 45 chr5 60597142 60597344 -139032806 + Charlie8 DNA MER1_type 56 265 -2152 189 195 0 0 chr5 60597442 60597483 -139032667 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 2256 123 0 0 chr5 60597651 60597952 -139032198 + AluSx SINE Alu 1 301 -11 541 280 57 42 chr5 60598480 60598673 -139031477 - MER91A DNA MER1_type 0 196 1 2267 100 3 10 chr5 60599056 60599356 -139030794 + AluSp SINE Alu 1 298 -15 240 149 0 0 chr5 60599783 60599830 -139030320 + (TCCTG)n Simple_repeat Simple_repeat 3 49 0 2269 121 132 8 chr5 60600489 60600868 -139029282 + MSTA LTR MaLR 1 426 -2 267 342 12 12 chr5 60600917 60601078 -139029072 + CT-rich Low_complexity Low_complexity 1 161 0 222 118 0 0 chr5 60602641 60602675 -139027475 + (TG)n Simple_repeat Simple_repeat 1 34 0 318 169 0 0 chr5 60602693 60602758 -139027392 + GA-rich Low_complexity Low_complexity 2 66 0 2038 248 115 22 chr5 60603414 60604125 -139026025 - L1ME3A LINE L1 -1 6169 5393 547 305 53 0 chr5 60604568 60604758 -139025392 + MIR SINE MIR 53 252 -10 386 314 137 16 chr5 60605014 60605269 -139024881 + Charlie8 DNA MER1_type 6 291 -2126 1625 207 106 38 chr5 60605490 60605963 -139024187 - MLT1D LTR MaLR 0 505 1 180 176 0 0 chr5 60606749 60606783 -139023367 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 295 221 168 0 chr5 60607116 60607211 -139022939 + L2 LINE L2 3162 3272 0 486 213 153 7 chr5 60607243 60607393 -139022757 - MIR SINE MIR -25 237 66 201 129 0 0 chr5 60607396 60607427 -139022723 - MIR SINE MIR -12 250 220 2295 90 0 0 chr5 60607646 60607924 -139022226 + AluSc SINE Alu 1 278 -31 603 198 9 0 chr5 60607997 60608108 -139022042 - MLT1D LTR MaLR 0 505 394 483 301 22 38 chr5 60608137 60608320 -139021830 - MIR SINE MIR -81 181 2 445 306 57 81 chr5 60608325 60608985 -139021165 + L2 LINE L2 2601 3242 -30 382 304 32 70 chr5 60609059 60609217 -139020933 + L2 LINE L2 3121 3272 0 252 136 0 0 chr5 60610451 60610459 -139019691 + (GAAA)n Simple_repeat Simple_repeat 2 9 -36 2271 109 0 3 chr5 60610459 60610770 -139019380 + AluSg SINE Alu 1 310 0 252 136 0 0 chr5 60610770 60610805 -139019345 + (GAAA)n Simple_repeat Simple_repeat 8 45 0 447 309 93 0 chr5 60611589 60611728 -139018422 - MER91A DNA MER1_type -1 195 44 872 270 65 27 chr5 60612284 60612577 -139017573 + MLT1I LTR MaLR 104 407 -2 2291 231 81 45 chr5 60612837 60613421 -139016729 + MER77 LTR ERV1 1 605 0 22 0 0 0 chr5 60614064 60614086 -139016064 + AT_rich Low_complexity Low_complexity 1 22 0 452 298 53 16 chr5 60615410 60615592 -139014558 - MIR3 SINE MIR -15 193 2 581 310 34 25 chr5 60615657 60615896 -139014254 - MIR SINE MIR -8 254 14 507 334 112 28 chr5 60616339 60616949 -139013201 + L2 LINE L2 1898 2558 -756 231 326 23 16 chr5 60617016 60617145 -139013005 - LTR16A1 LTR ERVL 0 457 328 282 335 48 91 chr5 60617504 60617943 -139012207 + L2 LINE L2 2807 3226 -46 22 20 5 0 chr5 60617955 60618011 -139012139 + AT_rich Low_complexity Low_complexity 1 29 0 4579 155 74 45 chr5 60619548 60620262 -139009888 - MER21A LTR ERV1 0 931 184 2195 69 73 14 chr5 60620262 60620550 -139009600 - L1PA8A LINE L1 -2 6129 5825 4579 155 74 45 chr5 60620550 60620740 -139009410 - MER21A LTR ERV1 -747 184 1 192 236 0 55 chr5 60620783 60620838 -139009312 - L2 LINE L2 -8 3305 3254 24 53 0 0 chr5 60621257 60621295 -139008855 + AT_rich Low_complexity Low_complexity 1 38 0 762 240 161 16 chr5 60621387 60621820 -139008330 - MLT1G1 LTR MaLR -23 572 1 23 0 0 0 chr5 60622522 60622545 -139007605 + AT_rich Low_complexity Low_complexity 1 23 0 639 230 104 123 chr5 60622679 60623092 -139007058 + L2 LINE L2 2907 3311 -2 2002 198 67 51 chr5 60623213 60623703 -139006447 - MLT1D LTR MaLR -3 502 5 281 321 85 0 chr5 60624379 60624485 -139005665 + L2 LINE L2 3199 3313 0 301 299 62 10 chr5 60627790 60627887 -139002263 + MER91A DNA MER1_type 1 102 -94 976 137 0 69 chr5 60628391 60628566 -139001584 - FRAM SINE Alu -5 171 9 4300 146 22 15 chr5 60628953 60629681 -139000469 + L1MA8 LINE L1 5420 6152 -139 218 289 158 72 chr5 60630394 60630546 -138999604 - L3 LINE CR1 -3 1574 1410 554 302 94 5 chr5 60630608 60630820 -138999330 - MIR SINE MIR -29 233 3 526 289 60 104 chr5 60631291 60631827 -138998323 + LTR67 LTR ERVL 23 534 -23 2487 59 0 0 chr5 60632142 60632431 -138997719 + AluY SINE Alu 20 308 -3 1826 110 0 0 chr5 60632532 60632769 -138997381 + AluSq SINE Alu 1 237 -76 325 348 36 0 chr5 60634209 60634347 -138995803 + MIR SINE MIR 108 250 -12 208 311 163 15 chr5 60634900 60635035 -138995115 - MIR3 SINE MIR -39 169 15 210 281 0 35 chr5 60635329 60635386 -138994764 - L2 LINE L2 -4 3309 3255 680 300 24 9 chr5 60635422 60635632 -138994518 - MIR SINE MIR -29 233 21 222 338 0 0 chr5 60635693 60635761 -138994389 + MIR SINE MIR 173 240 -22 698 210 63 44 chr5 60636359 60636564 -138993586 + MER3 DNA MER1_type 1 209 0 191 366 84 0 chr5 60636774 60636905 -138993245 - MIR3 SINE MIR -2 206 65 245 301 163 31 chr5 60637603 60637799 -138992351 - MIR SINE MIR -30 232 11 2476 88 3 0 chr5 60639327 60639635 -138990515 - AluSx SINE Alu -3 309 1 402 0 0 0 chr5 60639641 60639687 -138990463 + MADE1 DNA Mariner 35 80 0 1058 250 94 17 chr5 60639693 60640179 -138989971 + MLT1G LTR MaLR 2 537 0 712 288 100 58 chr5 60640833 60641284 -138988866 - L2 LINE L2 -2 3311 2842 213 39 0 0 chr5 60641414 60641440 -138988710 + (CAT)n Simple_repeat Simple_repeat 2 27 0 431 271 50 7 chr5 60642499 60642639 -138987511 - MIR SINE MIR -55 207 62 656 262 53 34 chr5 60642755 60642961 -138987189 - MIR SINE MIR -22 240 31 411 336 104 17 chr5 60644675 60644916 -138985234 - MIR SINE MIR 0 262 1 208 155 52 17 chr5 60645331 60645389 -138984761 + GA-rich Low_complexity Low_complexity 2 61 0 363 271 37 0 chr5 60647038 60647145 -138983005 + MLT1J1 LTR MaLR 70 180 -266 5907 102 255 89 chr5 60647154 60648610 -138981540 + pTR5 LTR ERV1 741 2438 0 383 286 66 46 chr5 60648652 60648848 -138981302 + MLT1J2 LTR MaLR 248 447 -3 194 260 233 0 chr5 60649118 60649191 -138980959 - MIR SINE MIR -93 169 80 1869 106 42 3 chr5 60650472 60650756 -138979394 - L1MA1 LINE L1 0 6302 6008 1009 281 79 27 chr5 60650905 60651311 -138978839 + L1MC4a LINE L1 5522 5948 -1860 318 283 22 29 chr5 60651581 60651719 -138978431 + L1MEc LINE L1 37 173 -6223 264 235 76 23 chr5 60652324 60652456 -138977694 + L1MEc LINE L1 656 794 -5411 38274 87 11 7 chr5 60652464 60658578 -138971572 + L1PA6 LINE L1 11 6154 0 1864 271 62 63 chr5 60658561 60659672 -138970478 + L1MEc LINE L1 824 1935 -4461 * 1928 151 10 16 chr5 60659672 60659983 -138970167 + AluJo SINE Alu 1 309 -3 1864 271 62 63 chr5 60659983 60660170 -138969980 + L1MEc LINE L1 1935 2121 -4275 207 277 15 0 chr5 60660234 60660299 -138969851 + A-rich Low_complexity Low_complexity 1 66 0 181 317 65 81 chr5 60660485 60660608 -138969542 - MIR SINE MIR -15 247 127 185 330 82 41 chr5 60660609 60660706 -138969444 + L2 LINE L2 3151 3251 -21 3543 187 62 3 chr5 60661001 60661723 -138968427 - L1P LINE L1 -1607 4539 3775 307 267 157 29 chr5 60662222 60662394 -138967756 + L2 LINE L2 2832 3025 -288 7431 58 11 12 chr5 60662424 60664002 -138966148 - SVA Other Other -760 1386 5 1970 177 8 5 chr5 60664008 60664397 -138965753 - L1 LINE L1 -2365 3781 3392 * 6037 142 17 2 chr5 60664392 60665969 -138964181 + L1PA15 LINE L1 4572 6162 -3 285 252 100 122 chr5 60668868 60669098 -138961052 + MIR SINE MIR 32 256 -6 * 592 306 96 13 chr5 60669093 60669322 -138960828 + MIR SINE MIR 15 262 0 738 265 43 28 chr5 60670182 60670435 -138959715 + L2 LINE L2 3035 3291 -22 328 281 222 6 chr5 60670805 60670976 -138959174 + L1MC/D LINE L1 5613 5820 -1988 833 328 64 44 chr5 60671470 60671989 -138958161 + L2 LINE L2 2413 2941 -373 297 353 40 90 chr5 60672160 60672559 -138957591 - L2 LINE L2 -4 3268 2890 836 237 137 0 chr5 60672615 60672826 -138957324 - MIR SINE MIR 0 262 23 212 393 66 8 chr5 60672857 60672979 -138957171 - L2 LINE L2 -553 2761 2633 6856 57 8 6 chr5 60672983 60674474 -138955676 + L1PA7 LINE L1 4652 6148 -6 194 296 95 37 chr5 60674892 60675081 -138955069 - L2 LINE L2 -1210 2104 1905 187 29 0 59 chr5 60675821 60675855 -138954295 + (CCCA)n Simple_repeat Simple_repeat 1 32 0 473 321 102 40 chr5 60676231 60676654 -138953496 - L2 LINE L2 0 3272 2824 327 407 7 0 chr5 60676939 60677079 -138953071 - L2 LINE L2 -580 2734 2594 338 255 80 48 chr5 60677241 60677492 -138952658 + L1ME LINE L1 4872 5130 -1016 1095 149 11 0 chr5 60677513 60677701 -138952449 + L1MB1 LINE L1 5979 6168 0 485 309 93 22 chr5 60677906 60678188 -138951962 + L1ME LINE L1 5368 5664 -457 22 35 0 0 chr5 60680130 60680159 -138949991 + AT_rich Low_complexity Low_complexity 1 29 0 261 0 0 0 chr5 60680954 60680983 -138949167 + (CA)n Simple_repeat Simple_repeat 1 29 0 2678 7 0 0 chr5 60681238 60681539 -138948611 + L1PA3 LINE L1 5855 6155 0 30 0 0 0 chr5 60681539 60681569 -138948581 + AT_rich Low_complexity Low_complexity 1 30 0 377 232 0 0 chr5 60681569 60681638 -138948512 - FLAM SINE Alu -15 118 50 498 88 0 0 chr5 60681638 60681706 -138948444 - L1P1 LINE L1 -477 5678 5611 590 27 0 0 chr5 60681706 60681779 -138948371 + L1PA3 LINE L1 6081 6155 0 309 210 26 4 chr5 60681803 60681906 -138948244 + L1MD2 LINE L1 6018 6140 -43 893 110 0 0 chr5 60683126 60683262 -138946888 - L1MA4 LINE L1 -6 6294 6159 4497 77 10 0 chr5 60686102 60686698 -138943452 + L1PA10 LINE L1 5563 6164 -4 229 344 16 8 chr5 60686784 60686912 -138943238 + GA-rich Low_complexity Low_complexity 2 130 0 1246 284 95 30 chr5 60687822 60688255 -138941895 - MER115 DNA AcHobo -232 461 1 21 0 0 0 chr5 60689106 60689127 -138941023 + AT_rich Low_complexity Low_complexity 1 21 0 274 333 114 0 chr5 60689561 60689666 -138940484 + MIR SINE MIR 29 145 -117 275 238 0 16 chr5 60689808 60689871 -138940279 - L2 LINE L2 -1 3312 3251 2158 130 0 13 chr5 60689985 60690301 -138939849 + AluSx SINE Alu 1 312 0 317 24 24 0 chr5 60690862 60690904 -138939246 + (TG)n Simple_repeat Simple_repeat 2 44 0 216 273 0 0 chr5 60691735 60691878 -138938272 + CT-rich Low_complexity Low_complexity 1 143 0 992 325 72 7 chr5 60693905 60694351 -138935799 + MER115 DNA AcHobo 1 475 -218 247 108 27 0 chr5 60694333 60694370 -138935780 + Zaphod DNA AcHobo 3994 4031 0 * 259 271 54 39 chr5 60694451 60694580 -138935570 + MER94 DNA DNA 4 134 0 249 57 0 0 chr5 60695240 60695275 -138934875 + (CA)n Simple_repeat Simple_repeat 2 36 0 303 264 27 27 chr5 60695324 60695434 -138934716 - MER5A DNA MER1_type -1 188 79 230 314 21 43 chr5 60695340 60695480 -138934670 + MER5A DNA MER1_type 27 163 -26 * 1417 194 15 40 chr5 60696702 60696975 -138933175 + AluJo SINE Alu 1 266 -46 221 53 53 0 chr5 60696989 60697027 -138933123 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1630 129 17 124 chr5 60697523 60697933 -138932217 - MER47A DNA MER2_type 0 366 1 2129 114 0 0 chr5 60698906 60699220 -138930930 - AluSg SINE Alu 0 314 1 1953 153 138 11 chr5 60699511 60699889 -138930261 - MSTA LTR MaLR -2 426 1 1888 190 0 0 chr5 60700009 60700319 -138929831 - AluJb SINE Alu 0 312 3 973 182 0 39 chr5 60700531 60700712 -138929438 - AluJo SINE Alu -138 174 1 416 339 164 14 chr5 60700733 60701373 -138928777 + L2 LINE L2 1519 2254 -1060 14742 135 18 17 chr5 60701374 60703783 -138926367 + Tigger1 DNA MER2_type 7 2417 -1 281 270 150 10 chr5 60703883 60703983 -138926167 + MIR SINE MIR 78 191 -71 934 232 12 64 chr5 60704027 60704277 -138925873 - MIR SINE MIR -21 241 5 1704 185 96 3 chr5 60704573 60704908 -138925242 + MER47A DNA MER2_type 1 366 0 976 90 23 17 chr5 60704908 60705007 -138925143 + (GGAA)n Simple_repeat Simple_repeat 1 277 0 976 90 23 17 chr5 60705007 60705184 -138924966 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 264 125 0 0 chr5 60705216 60705256 -138924894 + L1MC4a LINE L1 7612 7651 -157 893 154 18 61 chr5 60705281 60705493 -138924657 + L1MC4 LINE L1 7846 7992 -3 1802 178 46 0 chr5 60705969 60705992 -138924158 - MLT1A1 LTR MaLR 0 365 345 279 0 0 0 chr5 60705992 60706023 -138924127 + (TA)n Simple_repeat Simple_repeat 1 31 0 1802 178 46 0 chr5 60706023 60706348 -138923802 - MLT1A1 LTR MaLR -20 345 1 199 316 29 15 chr5 60707098 60707182 -138922968 - MIR3 SINE MIR -54 154 69 447 307 9 0 chr5 60707490 60707604 -138922546 - L2 LINE L2 -1 3312 3198 226 345 11 98 chr5 60707642 60707816 -138922334 + MIR SINE MIR 89 247 -15 704 269 196 19 chr5 60708243 60708890 -138921260 + L2 LINE L2 2538 3308 -5 219 294 147 0 chr5 60708908 60709010 -138921140 - L2 LINE L2 -940 2374 2258 336 243 182 105 chr5 60709636 60709932 -138920218 + MLT1H LTR MaLR 231 549 0 276 292 143 42 chr5 60710836 60711004 -138919146 - MIR SINE MIR -70 192 8 1016 203 55 23 chr5 60711457 60711674 -138918476 - MER58A DNA MER1_type 0 224 1 981 217 5 0 chr5 60712261 60712445 -138917705 - MIR SINE MIR -50 212 28 491 84 56 0 chr5 60712456 60712527 -138917623 + MADE1 DNA Mariner 4 78 -2 430 227 43 57 chr5 60713873 60713900 -138916250 + MLT1J2 LTR MaLR 1 27 -423 1540 219 22 22 chr5 60713900 60714265 -138915885 + MLT1A1 LTR MaLR 1 365 0 430 227 43 57 chr5 60714265 60714378 -138915772 + MLT1J2 LTR MaLR 27 139 -311 303 288 63 68 chr5 60714414 60714605 -138915545 + MLT1J2 LTR MaLR 259 448 -2 751 214 0 32 chr5 60715049 60715203 -138914947 - AluJb SINE Alu -30 282 134 186 354 123 0 chr5 60715366 60715431 -138914719 + L2 LINE L2 3147 3219 -53 190 289 0 0 chr5 60716800 60716845 -138913305 - MIR SINE MIR -108 154 110 242 71 0 24 chr5 60723255 60723297 -138906853 + (TTG)n Simple_repeat Simple_repeat 2 42 0 928 249 60 0 chr5 60723616 60723849 -138906301 + MIR SINE MIR 2 248 -14 1268 7 0 13 chr5 60723860 60724010 -138906140 + L1PA2 LINE L1 6008 6155 0 1668 154 23 49 chr5 60724032 60724338 -138905812 + AluJo SINE Alu 11 308 -4 2903 50 0 0 chr5 60724413 60724770 -138905380 + L1PA6 LINE L1 5792 6148 -6 180 111 0 0 chr5 60724774 60724801 -138905349 + (A)n Simple_repeat Simple_repeat 1 27 0 387 0 0 0 chr5 60725455 60725498 -138904652 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 339 328 15 88 chr5 60727191 60727395 -138902755 - MER5A DNA MER1_type 0 189 1 406 215 133 22 chr5 60728501 60728636 -138901514 - MIR SINE MIR -48 214 65 366 311 62 11 chr5 60728812 60729072 -138901078 - L1ME LINE L1 -297 5824 5552 1808 177 3 3 chr5 60729262 60729562 -138900588 - AluJb SINE Alu 0 312 13 345 47 0 0 chr5 60730027 60730070 -138900080 + (CA)n Simple_repeat Simple_repeat 2 44 0 230 259 10 0 chr5 60730142 60730202 -138899948 - MIR SINE MIR -77 131 67 253 289 41 0 chr5 60731107 60731204 -138898946 - MIR SINE MIR -44 218 118 1722 170 29 13 chr5 60731898 60732204 -138897946 + AluJb SINE Alu 1 311 -1 597 322 48 4 chr5 60732504 60732731 -138897419 + MIR SINE MIR 23 259 -3 269 255 28 38 chr5 60732739 60732845 -138897305 - MIR SINE MIR -94 168 64 7736 21 0 1 chr5 60732874 60734433 -138895717 - L1PA3 LINE L1 -3 6152 4595 329 85 0 0 chr5 60734434 60734481 -138895669 - L1P LINE L1 -6098 48 2 240 247 0 75 chr5 60738072 60738200 -138891950 + (CATG)n Simple_repeat Simple_repeat 1 118 0 390 205 57 0 chr5 60738737 60738859 -138891291 - L1ME4a LINE L1 -2 6119 5991 2108 111 17 0 chr5 60738958 60739246 -138890904 - AluSx SINE Alu -19 293 1 249 277 141 24 chr5 60739268 60739517 -138890633 - L1ME4a LINE L1 -365 5756 5479 194 330 152 27 chr5 60740175 60740287 -138889863 + L2 LINE L2 3138 3263 -9 3031 212 9 32 chr5 60740452 60740732 -138889418 + MER82 DNA MER2_type 2 287 -366 1649 120 0 4 chr5 60740732 60740991 -138889159 - AluSg/x SINE Alu 0 312 81 3031 212 9 32 chr5 60740991 60741375 -138888775 + MER82 DNA MER2_type 287 651 -2 221 347 71 24 chr5 60742584 60742754 -138887396 - L2 LINE L2 -587 2727 2550 1738 142 28 18 chr5 60742829 60743140 -138887010 - AluSx SINE Alu 0 314 1 279 0 0 0 chr5 60743389 60743420 -138886730 + (TAA)n Simple_repeat Simple_repeat 1 31 0 570 335 21 5 chr5 60743460 60743648 -138886502 - MIR SINE MIR -71 191 1 43 35 0 0 chr5 60743665 60743722 -138886428 + AT_rich Low_complexity Low_complexity 1 57 0 586 225 63 35 chr5 60744467 60744751 -138885399 + L1MEc LINE L1 1532 1823 -4573 1578 249 150 33 chr5 60744841 60746108 -138884042 + L1MEc LINE L1 2103 3464 -2751 1499 253 87 40 chr5 60746114 60746984 -138883166 + L1MEc LINE L1 3604 4514 -1701 500 289 66 22 chr5 60747004 60747322 -138882828 - L1M4 LINE L1 -1359 4787 4456 237 132 0 0 chr5 60747453 60747491 -138882659 + (TTTTC)n Simple_repeat Simple_repeat 2 39 0 347 238 150 96 chr5 60747616 60747856 -138882294 - MER112 DNA MER1_type 0 260 8 520 219 19 0 chr5 60748547 60748652 -138881498 - MIR SINE MIR 0 262 156 7684 173 111 17 chr5 60748659 60750264 -138879886 + MER52A LTR ERV1 1 1755 0 257 317 12 0 chr5 60750264 60750346 -138879804 - MIR SINE MIR -113 149 67 405 273 102 17 chr5 60753332 60753508 -138876642 + MIR SINE MIR 2 192 -70 213 39 0 0 chr5 60754171 60754197 -138875953 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 469 309 28 37 chr5 60754787 60755004 -138875146 + MIR SINE MIR 3 209 -53 547 312 181 0 chr5 60755022 60755243 -138874907 - MIR SINE MIR 0 262 2 198 300 280 10 chr5 60755635 60755735 -138874415 - L2 LINE L2 0 3272 3146 2227 87 10 0 chr5 60756049 60756348 -138873802 + AluSc SINE Alu 2 303 -6 362 337 66 73 chr5 60756436 60756845 -138873305 + L2 LINE L2 2848 3253 -19 2771 152 13 65 chr5 60757008 60757542 -138872608 + MLT2B2 LTR ERVL 2 507 -8 230 300 161 8 chr5 60757557 60757687 -138872463 - L2 LINE L2 -5 3308 3159 199 224 20 7 chr5 60757719 60757768 -138872382 + MIR SINE MIR 57 104 -104 429 265 138 56 chr5 60758087 60758283 -138871867 + L2 LINE L2 3056 3267 -5 1505 226 54 49 chr5 60759009 60759544 -138870606 - MER68 LTR ERV1 0 562 25 252 319 39 78 chr5 60759764 60759996 -138870154 - L2 LINE L2 -460 2854 2632 558 310 118 18 chr5 60761454 60761683 -138868467 + MIR SINE MIR 11 262 0 3780 113 111 113 chr5 60761993 60763399 -138866751 + pTR5 LTR ERV1 727 2438 0 2222 85 0 39 chr5 60763604 60763909 -138866241 + AluY SINE Alu 1 293 -18 224 268 146 24 chr5 60764120 60764202 -138865948 - MIR3 SINE MIR -51 157 66 1759 169 24 0 chr5 60764675 60764971 -138865179 - AluJb SINE Alu -6 306 4 1264 182 191 9 chr5 60765641 60765976 -138864174 + MSTD LTR MaLR 1 396 0 3841 165 38 34 chr5 60765982 60766006 -138864144 - L1MA9 LINE L1 -60 6252 6230 1840 154 138 16 chr5 60766006 60766448 -138863702 - LTR54B LTR ERV1 -2 496 1 3841 165 38 34 chr5 60766448 60766918 -138863232 - L1MA9 LINE L1 -82 6230 5751 297 0 0 0 chr5 60766918 60766951 -138863199 + (CA)n Simple_repeat Simple_repeat 2 34 0 3841 165 38 34 chr5 60766951 60767332 -138862818 - L1MA9 LINE L1 -561 5751 5373 21 0 0 0 chr5 60767748 60767769 -138862381 + AT_rich Low_complexity Low_complexity 1 21 0 229 293 58 21 chr5 60768014 60768202 -138861948 - L1M4 LINE L1 -1322 4824 4630 548 327 77 39 chr5 60768318 60768758 -138861392 - L1M4 LINE L1 -1881 4265 3809 254 183 58 58 chr5 60768773 60768877 -138861273 - L1P LINE L1 -2374 3772 3669 1375 178 64 8 chr5 60769275 60769711 -138860439 + L1MB4 LINE L1 5704 6180 0 301 277 118 22 chr5 60769813 60770084 -138860066 - L1M4 LINE L1 -2993 3153 2857 351 300 129 24 chr5 60770791 60771124 -138859026 - HAL1b LINE L1 -935 413 46 532 217 138 26 chr5 60772395 60772547 -138857603 + MER5A DNA MER1_type 21 189 0 563 251 195 32 chr5 60773979 60774230 -138855920 + L2 LINE L2 1771 2062 -1252 392 214 56 90 chr5 60774935 60775110 -138855040 - MIR3 SINE MIR -34 174 7 2306 91 0 3 chr5 60775422 60775719 -138854431 + AluSq SINE Alu 5 300 -13 776 273 54 11 chr5 60778524 60778784 -138851366 + ERVL LTR ERVL 5166 5436 -328 289 265 136 15 chr5 60779077 60779209 -138850941 + LTR41 LTR ERVL 6 153 -620 1944 124 50 0 chr5 60779221 60779519 -138850631 + AluSq SINE Alu 1 313 0 526 238 16 97 chr5 60779834 60780082 -138850068 + LTR41 LTR ERVL 510 737 -36 6455 154 45 7 chr5 60780164 60780424 -138849726 + L1MA4A LINE L1 3940 4189 -2114 1852 188 0 0 chr5 60780424 60780727 -138849423 + AluJb SINE Alu 1 303 -9 6455 154 45 7 chr5 60780727 60780932 -138849218 + L1MA4A LINE L1 4189 4385 -1918 180 0 0 0 chr5 60780932 60780952 -138849198 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 6455 154 45 7 chr5 60780952 60782756 -138847394 + L1MA4A LINE L1 4385 6297 -6 21 57 0 0 chr5 60782756 60782791 -138847359 + AT_rich Low_complexity Low_complexity 1 35 0 3046 157 27 46 chr5 60782939 60783613 -138846537 + L1MB8 LINE L1 5503 6163 -15 301 294 106 24 chr5 60783947 60784117 -138846033 + MIR3 SINE MIR 14 197 -11 21 0 0 0 chr5 60784447 60784468 -138845682 + AT_rich Low_complexity Low_complexity 1 21 0 39 22 0 0 chr5 60784994 60785040 -138845110 + AT_rich Low_complexity Low_complexity 1 46 0 1984 150 4 0 chr5 60785062 60785394 -138844756 + AluSx SINE Alu 1 333 0 581 246 40 22 chr5 60785464 60785688 -138844462 - MER69 DNA AcHobo -78 2448 2221 468 283 30 34 chr5 60785959 60786224 -138843926 - MER69 DNA AcHobo -1166 1360 1097 290 197 16 0 chr5 60786317 60786378 -138843772 - MER58A DNA MER1_type 0 224 163 1653 152 0 15 chr5 60786391 60786654 -138843496 - AluJb SINE Alu -9 303 45 318 167 83 0 chr5 60786673 60786733 -138843417 - AluJb SINE Alu -237 65 1 * 560 285 32 0 chr5 60786729 60786887 -138843263 - MER58A DNA MER1_type 0 166 4 1031 260 64 70 chr5 60786980 60787483 -138842667 - MER69 DNA AcHobo -1510 1016 517 38497 56 4 6 chr5 60787493 60793525 -138836625 + L1PA4 LINE L1 135 6155 0 587 260 60 39 chr5 60793527 60793943 -138836207 + L1M4 LINE L1 2800 3224 -2922 898 186 34 11 chr5 60794608 60794785 -138835365 + MER5A DNA MER1_type 8 188 -1 22697 74 7 10 chr5 60795614 60798968 -138831182 - L1P LINE L1 -2369 3777 437 30651 44 2 2 chr5 60799283 60803259 -138826891 + L1P LINE L1 291 4265 -1881 28 48 0 0 chr5 60803514 60803556 -138826594 + AT_rich Low_complexity Low_complexity 1 42 0 1358 216 0 18 chr5 60803609 60803882 -138826268 + AluJb SINE Alu 2 269 -43 508 175 10 0 chr5 60804039 60804142 -138826008 - L1MB7 LINE L1 -12 6172 6069 198 191 0 0 chr5 60804289 60804331 -138825819 + A-rich Low_complexity Low_complexity 5 46 0 850 214 92 5 chr5 60804906 60805112 -138825038 - MER58A DNA MER1_type 0 224 1 682 212 91 71 chr5 60805184 60805580 -138824570 - LTR37B LTR ERV1 0 468 65 1385 158 187 59 chr5 60805653 60805725 -138824425 - MSTB LTR MaLR -2 424 363 4025 73 0 0 chr5 60805725 60806246 -138823904 - L1PA8A LINE L1 0 6131 5611 1385 158 187 59 chr5 60806246 60806547 -138823603 - MSTB LTR MaLR -63 363 3 1968 98 35 96 chr5 60806555 60806951 -138823199 - MSTA-int LTR MaLR -7 1573 1202 2145 99 0 0 chr5 60807075 60807378 -138822772 - L1P LINE L1 -5837 309 7 2019 116 16 0 chr5 60807382 60807702 -138822448 - MSTA-int LTR MaLR -1253 327 3 1925 122 151 19 chr5 60807704 60808082 -138822068 - MSTA LTR MaLR 0 428 1 1185 261 52 71 chr5 60808256 60808858 -138821292 + MLT1G1 LTR MaLR 1 590 -5 22 0 0 0 chr5 60808970 60808992 -138821158 + AT_rich Low_complexity Low_complexity 1 22 0 22 94 0 0 chr5 60809495 60809559 -138820591 + AT_rich Low_complexity Low_complexity 1 64 0 1896 239 27 29 chr5 60809582 60810102 -138820048 + MLT1F LTR MaLR 1 519 -23 615 253 38 11 chr5 60810440 60810626 -138819524 + LTR41 LTR ERVL 1 191 -582 414 261 65 83 chr5 60811003 60811279 -138818871 + LTR41 LTR ERVL 502 772 -1 273 140 0 0 chr5 60811371 60811428 -138818722 + (GA)n Simple_repeat Simple_repeat 1 57 0 445 216 36 36 chr5 60812532 60812671 -138817479 - MER104 DNA Tc2 -41 139 1 5490 111 30 22 chr5 60812813 60814071 -138816079 - L1PA15 LINE L1 0 6165 4906 38 51 0 0 chr5 60814488 60814547 -138815603 + AT_rich Low_complexity Low_complexity 1 59 0 328 304 128 70 chr5 60815765 60816078 -138814072 + L2 LINE L2 2941 3271 -1 368 310 52 9 chr5 60816692 60816808 -138813342 - MIR3 SINE MIR -54 154 34 21 0 0 0 chr5 60818113 60818134 -138812016 + AT_rich Low_complexity Low_complexity 1 21 0 2578 106 19 0 chr5 60818575 60818943 -138811207 + THE1C LTR MaLR 1 375 0 438 299 7 15 chr5 60820900 60821037 -138809113 + MIR SINE MIR 8 143 -119 398 255 170 44 chr5 60821065 60821536 -138808614 + L1ME LINE L1 1041 1570 -4645 1825 168 31 14 chr5 60821536 60821894 -138808256 - MLT1A1 LTR MaLR 0 365 2 398 255 170 44 chr5 60821894 60821925 -138808225 + L1ME LINE L1 1570 1596 -4619 293 155 56 14 chr5 60821934 60822005 -138808145 + L1MB3 LINE L1 6110 6183 0 478 139 0 12 chr5 60822009 60822095 -138808055 + L1MB8 LINE L1 6093 6177 -1 308 254 36 21 chr5 60822556 60822797 -138807353 + L1ME LINE L1 2223 2518 -3697 1191 178 62 33 chr5 60822847 60823088 -138807062 + AluJo SINE Alu 46 293 -19 438 20 0 0 chr5 60823099 60823150 -138807000 + (CA)n Simple_repeat Simple_repeat 2 52 0 554 222 118 14 chr5 60823159 60823371 -138806779 + L1ME LINE L1 2650 2883 -3332 749 248 119 62 chr5 60823435 60823923 -138806227 + L1ME LINE L1 3673 4188 -2027 318 186 41 134 chr5 60823926 60823989 -138806161 - Tigger7 DNA MER2_type 0 2587 2534 2005 151 0 0 chr5 60823989 60824288 -138805862 - AluSx SINE Alu -13 299 1 318 186 41 134 chr5 60824288 60824320 -138805830 - Tigger7 DNA MER2_type -53 2534 2501 8298 121 30 19 chr5 60824320 60825656 -138804494 + Tigger1 DNA MER2_type 1 1350 -1068 741 241 51 10 chr5 60825655 60825850 -138804300 - Tigger7 DNA MER2_type -493 212 10 * 505 89 73 0 chr5 60825914 60826037 -138804113 + GA-rich Low_complexity Low_complexity 2 133 0 1792 225 66 31 chr5 60826060 60826603 -138803547 - MLT1F1 LTR MaLR -9 570 3 447 198 19 9 chr5 60826958 60827064 -138803086 + L1ME LINE L1 4566 4672 -1543 214 162 0 0 chr5 60827080 60827117 -138803033 + (TG)n Simple_repeat Simple_repeat 1 37 0 692 265 37 6 chr5 60827128 60827378 -138802772 + L1ME LINE L1 5402 5663 -576 24 67 0 0 chr5 60827423 60827468 -138802682 + AT_rich Low_complexity Low_complexity 1 45 0 216 396 45 0 chr5 60828185 60828296 -138801854 - L3b LINE CR1 -10 1573 1458 21 36 0 0 chr5 60830164 60830192 -138799958 + AT_rich Low_complexity Low_complexity 1 28 0 2718 115 83 7 chr5 60830694 60831080 -138799070 + MER9 LTR ERVK 34 460 -51 189 0 0 0 chr5 60831080 60831101 -138799049 + (TG)n Simple_repeat Simple_repeat 2 22 0 2718 115 83 7 chr5 60831101 60831158 -138798992 + MER9 LTR ERVK 460 511 0 2483 96 36 3 chr5 60832013 60832376 -138797774 + THE1C LTR MaLR 1 375 0 914 288 32 42 chr5 60832464 60832874 -138797276 + L1ME LINE L1 5411 5816 -305 703 192 45 169 chr5 60832931 60833197 -138796953 - MIR SINE MIR -17 245 13 395 207 0 9 chr5 60833265 60833381 -138796769 + GA-rich Low_complexity Low_complexity 4 118 0 25 31 0 0 chr5 60833528 60833560 -138796590 + AT_rich Low_complexity Low_complexity 1 32 0 383 272 98 40 chr5 60833893 60834066 -138796084 - MIR SINE MIR -74 188 6 470 329 122 9 chr5 60834080 60834302 -138795848 + MIR SINE MIR 2 248 -14 338 215 0 0 chr5 60834408 60834473 -138795677 - MIR SINE MIR -26 236 172 285 167 0 0 chr5 60834981 60835035 -138795115 + (TA)n Simple_repeat Simple_repeat 2 55 0 2397 85 10 0 chr5 60835376 60835681 -138794469 - AluSx SINE Alu -4 308 1 1522 159 68 9 chr5 60836274 60836595 -138793555 + L1MA7 LINE L1 5951 6290 -1 23 68 0 0 chr5 60837080 60837124 -138793026 + AT_rich Low_complexity Low_complexity 1 44 0 244 255 66 38 chr5 60837205 60837311 -138792839 - MER117 DNA MER1_type 0 197 89 1475 155 41 72 chr5 60837650 60837941 -138792209 + AluJo SINE Alu 1 282 -30 315 303 78 35 chr5 60838116 60838258 -138791892 - L2 LINE L2 -7 3306 3159 1052 299 81 30 chr5 60838618 60839339 -138790811 - L2 LINE L2 -1 3312 2541 313 22 43 0 chr5 60839596 60839642 -138790508 + (TTATA)n Simple_repeat Simple_repeat 2 49 0 26 50 0 0 chr5 60839750 60839790 -138790360 + AT_rich Low_complexity Low_complexity 1 40 0 1669 194 4 4 chr5 60839986 60840264 -138789886 + AluJo SINE Alu 1 278 -34 243 242 32 0 chr5 60840267 60840329 -138789821 + GA-rich Low_complexity Low_complexity 2 65 0 503 300 18 64 chr5 60841060 60841280 -138788870 + L2 LINE L2 3091 3300 -13 293 45 0 23 chr5 60841285 60841329 -138788821 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 181 206 29 0 chr5 60841359 60841393 -138788757 + MIR SINE MIR 34 68 -194 7373 138 47 20 chr5 60842136 60843301 -138786849 + Tigger1 DNA MER2_type 1 1204 -1214 2120 144 0 0 chr5 60843301 60843599 -138786551 + AluSx SINE Alu 1 298 -14 7373 138 47 20 chr5 60843599 60843700 -138786450 + Tigger1 DNA MER2_type 1204 1301 -1117 592 225 12 12 chr5 60843715 60843875 -138786275 + L1MC4 LINE L1 7743 7902 -140 283 325 33 8 chr5 60844432 60844552 -138785598 - L2 LINE L2 -973 2341 2219 * 347 283 87 22 chr5 60844546 60844684 -138785466 - L2 LINE L2 0 3313 3167 369 0 0 0 chr5 60844950 60844991 -138785159 + (TG)n Simple_repeat Simple_repeat 2 42 0 475 250 109 0 chr5 60845520 60845648 -138784502 - FLAM_A SINE Alu 0 142 1 2032 134 0 0 chr5 60845870 60846185 -138783965 + AluSx SINE Alu 1 315 0 41127 54 2 11 chr5 60846321 60851691 -138778459 + L1P LINE L1 1 5321 -825 1625 20 0 0 chr5 60851691 60851891 -138778259 + L1P LINE L1 5120 5319 -827 2275 27 3 3 chr5 60851891 60852272 -138777878 + L1P1 LINE L1 5118 5498 -657 2556 119 75 57 chr5 60852616 60853009 -138777141 + Tigger1 DNA MER2_type 798 1203 -1215 2120 144 0 0 chr5 60853009 60853307 -138776843 + AluSx SINE Alu 1 298 -14 2556 119 75 57 chr5 60853307 60853408 -138776742 + Tigger1 DNA MER2_type 1203 1301 -1117 592 225 12 12 chr5 60853423 60853583 -138776567 + L1MC4 LINE L1 7743 7902 -140 283 325 33 8 chr5 60854138 60854258 -138775892 - L2 LINE L2 -973 2341 2219 * 347 283 87 22 chr5 60854252 60854390 -138775760 - L2 LINE L2 0 3313 3167 405 0 0 0 chr5 60854656 60854701 -138775449 + (TG)n Simple_repeat Simple_repeat 2 46 0 475 250 109 0 chr5 60855230 60855358 -138774792 - FLAM_A SINE Alu 0 142 1 2032 134 0 0 chr5 60855580 60855895 -138774255 + AluSx SINE Alu 1 315 0 43000 50 3 0 chr5 60856031 60862166 -138767984 + L1PA4 LINE L1 1 6149 -6 28 0 0 0 chr5 60862166 60862194 -138767956 + AT_rich Low_complexity Low_complexity 1 28 0 2806 58 28 0 chr5 60862194 60862554 -138767596 + L1PA5 LINE L1 5770 6139 -15 352 256 56 24 chr5 60862741 60862866 -138767284 - HsTC2 DNA Tc2 -1009 889 761 4282 232 80 37 chr5 60862949 60865496 -138764654 - L1ME1 LINE L1 -9 6226 3585 314 229 70 0 chr5 60865491 60865595 -138764555 - L1M4 LINE L1 -3326 2820 2705 * 4251 63 5 40 chr5 60865597 60866200 -138763950 - L1PA7 LINE L1 -3 6151 5570 439 256 16 118 chr5 60867061 60867381 -138762769 - L1ME1 LINE L1 -4981 1224 970 * 2759 154 141 11 chr5 60867374 60867940 -138762210 - L1MB7 LINE L1 -51 6133 5494 496 243 42 0 chr5 60867940 60868084 -138762066 + MER112 DNA MER1_type 29 178 -82 298 286 94 47 chr5 60868131 60868302 -138761848 - L2 LINE L2 -961 2353 2175 188 175 75 0 chr5 60869254 60869294 -138760856 - MIR SINE MIR -75 133 91 1763 236 20 80 chr5 60870508 60871353 -138758797 - L1MA5 LINE L1 -450 5850 5068 234 204 0 0 chr5 60871353 60871397 -138758753 - LTR23 LTR ERV1 -73 364 321 1763 236 20 80 chr5 60871397 60871650 -138758500 - L1MA5 LINE L1 -1232 5068 4801 187 233 41 68 chr5 60873136 60873209 -138756941 - L2 LINE L2 -1746 1568 1498 445 299 86 91 chr5 60873520 60874058 -138756092 + L1M2 LINE L1 473 1007 -5842 441 282 136 19 chr5 60874362 60874575 -138755575 - MIR SINE MIR -12 250 13 398 217 258 10 chr5 60874852 60875050 -138755100 + MLT1H LTR MaLR 234 480 -69 2318 78 0 0 chr5 60875747 60876081 -138754069 + AluY SINE Alu 1 334 0 1408 99 6 0 chr5 60876257 60876438 -138753712 + AluSp SINE Alu 124 305 -8 307 235 15 0 chr5 60876900 60876968 -138753182 - Charlie8 DNA MER1_type -989 1428 1360 426 247 54 59 chr5 60877037 60877223 -138752927 - Charlie8 DNA MER1_type -2175 242 58 2012 145 61 10 chr5 60878510 60878903 -138751247 + MSTA LTR MaLR 1 413 -15 32 0 0 0 chr5 60881835 60881867 -138748283 + AT_rich Low_complexity Low_complexity 1 32 0 235 326 0 11 chr5 60882441 60882530 -138747620 - L3b LINE CR1 -318 1265 1178 2138 68 86 7 chr5 60882702 60882980 -138747170 - AluY SINE Alu -11 300 1 192 373 36 9 chr5 60883794 60883904 -138746246 + L2 LINE L2 2562 2674 -640 207 0 0 0 chr5 60885580 60885603 -138744547 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 903 127 17 69 chr5 60887857 60887996 -138742154 - MER2 DNA MER2_type 0 345 215 3577 120 8 24 chr5 60887996 60888531 -138741619 + MER1A DNA MER1_type 2 527 0 903 127 17 69 chr5 60888531 60888564 -138741586 - MER2 DNA MER2_type -130 215 182 28 79 0 0 chr5 60888973 60889036 -138741114 + AT_rich Low_complexity Low_complexity 1 63 0 1234 234 95 36 chr5 60889413 60889939 -138740211 + MER34B LTR ERV1 5 561 -4 318 375 55 0 chr5 60890483 60890611 -138739539 + MIR3 SINE MIR 46 180 -28 21 36 0 0 chr5 60891069 60891097 -138739053 + AT_rich Low_complexity Low_complexity 1 28 0 341 193 0 96 chr5 60891219 60891302 -138738848 - AluSp SINE Alu -93 210 136 36 0 0 0 chr5 60891366 60891402 -138738748 + AT_rich Low_complexity Low_complexity 1 36 0 829 157 0 15 chr5 60891426 60891560 -138738590 + FLAM_A SINE Alu 2 133 0 364 273 118 20 chr5 60891562 60891705 -138738445 + L1M4 LINE L1 4629 4756 -1390 1046 138 22 76 chr5 60891705 60891929 -138738221 - MER20 DNA MER1_type -4 215 4 364 273 118 20 chr5 60891929 60892089 -138738061 + L1M4 LINE L1 4756 4962 -1184 405 308 19 19 chr5 60892105 60892261 -138737889 + MLT1G1 LTR MaLR 16 171 -424 333 226 36 0 chr5 60892339 60892423 -138737727 + MLT1G1 LTR MaLR 202 288 -302 2206 124 3 10 chr5 60892601 60892915 -138737235 + AluSx SINE Alu 1 312 0 829 222 16 39 chr5 60893311 60893622 -138736528 - L1P LINE L1 -827 5319 5016 * 8499 101 47 10 chr5 60893615 60893736 -138736414 - L1PBa LINE L1 -3420 3442 3327 2215 85 43 0 chr5 60893736 60894017 -138736133 - AluY SINE Alu -18 293 1 8499 101 47 10 chr5 60894017 60894095 -138736055 - L1PBa LINE L1 -3535 3327 3253 2024 165 27 11 chr5 60894095 60894464 -138735686 - THE1C LTR MaLR 0 375 1 8499 101 47 10 chr5 60894464 60896062 -138734088 - L1PBa LINE L1 -3609 3253 1580 5413 112 4 15 chr5 60896062 60896851 -138733299 + LTR17 LTR ERV1 1 780 0 4902 69 8 6 chr5 60896867 60897534 -138732616 + HERV17 LTR ERV1 17 684 -7942 243 125 0 0 chr5 60897704 60897744 -138732406 + (GA)n Simple_repeat Simple_repeat 1 40 0 9132 71 6 25 chr5 60897745 60899082 -138731068 + HERV17 LTR ERV1 704 2014 -6612 * 10126 70 1 5 chr5 60899067 60899670 -138730480 + HERV17 LTR ERV1 2430 3034 -5592 2454 72 0 0 chr5 60899670 60899963 -138730187 + AluY SINE Alu 1 293 -18 10126 70 1 5 chr5 60899963 60900693 -138729457 + HERV17 LTR ERV1 3034 3758 -4868 572 172 31 16 chr5 60902355 60902483 -138727667 + L1MB3 LINE L1 6051 6180 -3 2295 96 3 0 chr5 60902496 60902789 -138727361 - AluSx SINE Alu -18 294 1 293 313 97 7 chr5 60903018 60903162 -138726988 - L2 LINE L2 -5 3267 3111 409 327 114 18 chr5 60903326 60903546 -138726604 + MIR SINE MIR 21 261 -1 197 241 95 78 chr5 60903592 60903708 -138726442 + MIR3 SINE MIR 1 118 -90 281 292 42 14 chr5 60904027 60904099 -138726051 + MIR SINE MIR 21 94 -168 224 278 0 19 chr5 60904409 60904463 -138725687 - MIR SINE MIR -147 115 63 1805 168 0 42 chr5 60904724 60905033 -138725117 + AluJb SINE Alu 1 296 -16 196 304 0 0 chr5 60905823 60905869 -138724281 - L2 LINE L2 -26 3246 3201 217 281 132 18 chr5 60905960 60906074 -138724076 - L2 LINE L2 -180 3092 2966 196 355 32 0 chr5 60906148 60906210 -138723940 + L2 LINE L2 3169 3232 -40 369 317 16 32 chr5 60906381 60906504 -138723646 + MIR SINE MIR 25 145 -63 1884 125 57 38 chr5 60906559 60906927 -138723223 + THE1C LTR MaLR 1 375 0 263 250 17 0 chr5 60906968 60907028 -138723122 - L2 LINE L2 -50 3222 3162 754 216 70 25 chr5 60907080 60907279 -138722871 - MER58A DNA MER1_type -4 220 13 211 365 125 0 chr5 60907281 60907377 -138722773 + L2 LINE L2 3151 3258 -14 766 223 53 78 chr5 60907430 60907789 -138722361 - LTR16B LTR ERVL -4 460 111 414 318 24 35 chr5 60907928 60908360 -138721790 - HERVL LTR ERVL -288 5403 4983 281 253 33 11 chr5 60908448 60908539 -138721611 - HERVL LTR ERVL -857 4797 4705 661 189 20 0 chr5 60908595 60908743 -138721407 - L1M4 LINE L1 -1410 4736 4586 2225 82 34 0 chr5 60908808 60909101 -138721049 - AluY SINE Alu -8 303 1 208 292 34 11 chr5 60910170 60910259 -138719891 + MIR3 SINE MIR 108 198 -10 350 261 73 6 chr5 60910406 60910571 -138719579 - L1ME LINE L1 -662 5500 5325 2242 99 0 3 chr5 60910628 60910922 -138719228 + AluSx SINE Alu 1 293 -19 260 111 56 0 chr5 60910922 60910994 -138719156 + (TA)n Simple_repeat Simple_repeat 1 76 0 26 50 0 0 chr5 60911002 60911042 -138719108 + AT_rich Low_complexity Low_complexity 1 40 0 232 232 73 0 chr5 60911050 60911214 -138718936 + (TA)n Simple_repeat Simple_repeat 1 176 0 229 256 61 0 chr5 60911376 60911540 -138718610 + (TA)n Simple_repeat Simple_repeat 1 174 0 201 255 68 0 chr5 60911554 60911715 -138718435 + (TA)n Simple_repeat Simple_repeat 1 172 0 306 225 153 34 chr5 60911715 60911924 -138718226 - L1ME LINE L1 -874 5272 5039 433 234 55 18 chr5 60912004 60912155 -138717995 - MLT1H1 LTR MaLR 0 555 420 1802 81 15 7 chr5 60912336 60912607 -138717543 + L1PBa LINE L1 1311 1583 -5280 4940 100 33 7 chr5 60912615 60913367 -138716783 - LTR17 LTR ERV1 -7 773 2 2268 54 0 7 chr5 60913368 60913662 -138716488 - HERV17 LTR ERV1 0 8626 8335 284 77 0 0 chr5 60913652 60913691 -138716459 - HERV17 LTR ERV1 -1078 7548 7510 * 15446 48 5 1 chr5 60913684 60915629 -138714521 - HERV17 LTR ERV1 -2607 6019 4068 864 86 78 0 chr5 60915864 60915992 -138714158 - MER85 DNA T2_type -1 138 1 21 0 0 0 chr5 60916055 60916076 -138714074 + AT_rich Low_complexity Low_complexity 1 21 0 370 235 38 45 chr5 60916663 60916795 -138713355 - LTR67 LTR ERVL 0 557 427 2275 98 0 13 chr5 60917851 60918166 -138711984 - AluY SINE Alu 0 311 1 707 187 0 53 chr5 60918166 60918233 -138711917 - FLAM_A SINE Alu -174 137 81 739 62 0 0 chr5 60918233 60918329 -138711821 + L1PA5 LINE L1 6059 6154 0 707 187 0 53 chr5 60918329 60918406 -138711744 - FLAM_A SINE Alu -230 81 1 252 100 0 0 chr5 60918656 60918696 -138711454 + (TTCTCC)n Simple_repeat Simple_repeat 6 45 0 297 51 0 0 chr5 60919225 60919264 -138710886 + (CA)n Simple_repeat Simple_repeat 1 39 0 * 369 0 0 0 chr5 60919263 60919304 -138710846 + (TC)n Simple_repeat Simple_repeat 1 41 0 221 254 68 0 chr5 60919406 60919465 -138710685 - MIR3 SINE MIR -6 202 140 1089 206 5 14 chr5 60919465 60919688 -138710462 - AluJo SINE Alu 0 312 92 187 279 16 33 chr5 60919690 60919751 -138710399 - MIR SINE MIR -64 144 85 450 248 19 32 chr5 60920061 60920218 -138709932 - L1ME1 LINE L1 -26 6140 5986 2088 222 50 24 chr5 60920228 60921279 -138708871 - L1ME1 LINE L1 -373 5793 4712 386 260 26 26 chr5 60921389 60921543 -138708607 + GA-rich Low_complexity Low_complexity 2 155 0 191 191 16 95 chr5 60921921 60921984 -138708166 + MIR SINE MIR 141 198 -64 317 327 75 5 chr5 60922820 60923016 -138707134 + MIR SINE MIR 16 218 -44 2039 227 18 45 chr5 60923118 60923722 -138706428 + L1MA7 LINE L1 1278 1865 -4984 597 213 49 0 chr5 60923727 60923849 -138706301 - FLAM_A SINE Alu -14 128 1 1318 163 18 42 chr5 60923851 60924046 -138706104 + L1MA7 LINE L1 1861 2046 -4803 3478 29 5 2 chr5 60924046 60924464 -138705686 + L1PA4 LINE L1 5734 6152 -3 1318 163 18 42 chr5 60924464 60924599 -138705551 + L1MA7 LINE L1 2046 2183 -4666 * 9491 153 29 18 chr5 60924572 60925089 -138705061 + L1MA7 LINE L1 4034 4544 -2379 1867 164 3 10 chr5 60925089 60925388 -138704762 + AluJb SINE Alu 2 298 -14 9491 153 29 18 chr5 60925388 60927001 -138703149 + L1MA7 LINE L1 4544 6180 -743 196 29 29 29 chr5 60929123 60929157 -138700993 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 197 302 16 16 chr5 60929349 60929412 -138700738 + L2 LINE L2 3230 3292 -21 2306 127 0 0 chr5 60929436 60929744 -138700406 - AluSx SINE Alu -3 309 2 2238 248 70 24 chr5 60930006 60930205 -138699945 + L1ME3A LINE L1 5285 5474 -692 3114 163 39 12 chr5 60930205 60930850 -138699300 + L1MA7 LINE L1 6322 6983 -10 2238 248 70 24 chr5 60930850 60931498 -138698652 + L1ME3A LINE L1 5474 6119 -47 360 299 197 8 chr5 60932825 60933114 -138697036 - L1ME LINE L1 -550 5612 5272 259 313 30 10 chr5 60933139 60933238 -138696912 + L2 LINE L2 3209 3309 -4 349 277 119 30 chr5 60933241 60933544 -138696606 - L1ME LINE L1 -884 5262 4933 2578 143 14 28 chr5 60933548 60933980 -138696170 - MSTB LTR MaLR 0 426 1 2336 89 0 3 chr5 60934185 60934488 -138695662 - AluSg SINE Alu -7 303 2 354 304 68 19 chr5 60936610 60936771 -138693379 + MLT1H LTR MaLR 6 174 -375 226 231 90 13 chr5 60936946 60937024 -138693126 + MLT1H LTR MaLR 420 503 -46 1902 94 8 0 chr5 60937063 60937307 -138692843 - AluSq SINE Alu -14 299 54 429 291 54 31 chr5 60939381 60939639 -138690511 + MER34 LTR ERV1 1 264 -278 1675 135 52 52 chr5 60939782 60940108 -138690042 - MER50 LTR ERV1 -12 722 397 1591 85 24 28 chr5 60940103 60940351 -138689799 - MER50 LTR ERV1 -487 247 1 * 371 339 33 29 chr5 60940351 60940581 -138689569 + MER34 LTR ERV1 291 521 -21 383 304 149 30 chr5 60941023 60941224 -138688926 + MIR SINE MIR 19 243 -19 21 0 0 0 chr5 60941248 60941269 -138688881 + AT_rich Low_complexity Low_complexity 1 21 0 1996 145 0 0 chr5 60941514 60941804 -138688346 + AluJb SINE Alu 9 298 -14 693 267 110 93 chr5 60941837 60942570 -138687580 - L2 LINE L2 0 3313 2570 280 254 17 0 chr5 60942550 60942609 -138687541 + L2 LINE L2 3254 3313 0 * 631 255 13 13 chr5 60943213 60943366 -138686784 + MIR SINE MIR 86 238 -24 1417 220 35 73 chr5 60943453 60943935 -138686215 - MLT2B1 LTR ERVL -56 464 1 840 187 63 7 chr5 60943935 60944127 -138686023 + MLT1E3 LTR MaLR 25 205 -419 803 231 34 38 chr5 60944144 60944382 -138685768 + MLT1E3 LTR MaLR 390 626 0 1403 158 4 53 chr5 60946101 60946366 -138683784 + AluJo SINE Alu 55 306 -6 876 158 7 0 chr5 60946783 60946922 -138683228 - L1MC1 LINE L1 -18 6315 6176 2273 133 55 8 chr5 60946975 60947373 -138682777 + MSTA LTR MaLR 12 428 0 387 257 18 0 chr5 60947373 60947486 -138682664 - L1ME3A LINE L1 -25 6145 6031 352 161 0 0 chr5 60947496 60947552 -138682598 + tRNA-Gln-CAG tRNA tRNA 2 57 -18 1923 153 0 10 chr5 60948170 60948470 -138681680 - AluJb SINE Alu -13 299 3 1375 164 96 39 chr5 60948472 60948752 -138681398 - AluJo SINE Alu -16 296 1 713 215 81 118 chr5 60949143 60949589 -138680561 + L1MC5 LINE L1 7292 7708 -253 697 257 5 11 chr5 60949589 60949776 -138680374 - MER5A DNA MER1_type -3 186 1 713 215 81 118 chr5 60949776 60949972 -138680178 + L1MC5 LINE L1 7708 7910 -51 700 156 5 152 chr5 60950017 60950241 -138679909 + L1M4 LINE L1 3916 4106 -2040 6771 61 23 0 chr5 60950297 60950891 -138679259 - L1PA7 LINE L1 -7 6147 5548 2054 122 37 3 chr5 60950891 60951185 -138678965 - AluSg SINE Alu -6 304 1 6771 61 23 0 chr5 60951185 60951517 -138678633 - L1PA7 LINE L1 -606 5548 5225 11874 114 7 35 chr5 60951522 60951983 -138678167 - L1P3 LINE L1 -3825 2636 2163 6180 40 1 0 chr5 60951983 60952727 -138677423 + L1PA5 LINE L1 5410 6154 0 11874 114 7 35 chr5 60952727 60954927 -138675223 - L1P3 LINE L1 -4298 2163 8 1999 237 58 21 chr5 60954934 60955643 -138674507 + L1M4 LINE L1 4092 4826 -1320 2048 131 116 38 chr5 60955994 60956391 -138673759 + MSTA LTR MaLR 1 428 0 755 185 99 0 chr5 60956555 60956717 -138673433 - MER5B DNA MER1_type 0 178 1 259 290 40 0 chr5 60957042 60957166 -138672984 - L1MC4 LINE L1 0 8042 7914 408 20 0 0 chr5 60957208 60957257 -138672893 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 301 152 0 0 chr5 60957269 60957315 -138672835 + Tigger2 DNA MER2_type 1 46 -2672 2192 126 139 0 chr5 60957332 60957705 -138672445 + Tigger2 DNA MER2_type 2294 2718 0 260 263 116 24 chr5 60957718 60958390 -138671760 - L1MC4 LINE L1 -210 7832 7031 9083 186 27 19 chr5 60958390 60960272 -138669878 + L1PA15 LINE L1 3291 5198 -967 896 30 37 7 chr5 60960272 60960407 -138669743 + (GAAA)n Simple_repeat Simple_repeat 2 140 0 9083 186 27 19 chr5 60960407 60961378 -138668772 + L1PA15 LINE L1 5198 6160 -5 260 263 116 24 chr5 60961378 60961646 -138668504 - L1MC4 LINE L1 -1011 7031 6789 496 327 20 7 chr5 60961813 60961963 -138668187 - L2 LINE L2 -4 3268 3117 226 380 19 19 chr5 60962056 60962164 -138667986 - L2 LINE L2 -194 3078 2971 198 0 0 0 chr5 60962249 60962271 -138667879 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 456 344 65 9 chr5 60962411 60962425 -138667725 - L2 LINE L2 -507 2807 2795 2149 125 17 0 chr5 60962425 60962721 -138667429 - AluSx SINE Alu -11 301 1 456 344 65 9 chr5 60962721 60962936 -138667214 - L2 LINE L2 -519 2795 2565 189 0 0 0 chr5 60962976 60962997 -138667153 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr5 60963541 60963562 -138666588 + AT_rich Low_complexity Low_complexity 1 21 0 3736 139 25 13 chr5 60963686 60964361 -138665789 - L1MB2 LINE L1 -28 6143 5461 605 110 0 0 chr5 60964361 60964443 -138665707 + AluSc SINE Alu 1 82 -227 993 119 0 0 chr5 60964443 60964577 -138665573 + AluSg/x SINE Alu 166 299 -13 2242 117 0 3 chr5 60964670 60964978 -138665172 + AluSx SINE Alu 1 307 -5 1290 239 71 45 chr5 60965682 60966189 -138663961 + MLT1G LTR MaLR 10 529 -61 554 219 21 16 chr5 60966189 60966381 -138663769 - L1PBa LINE L1 -2840 4022 3830 269 218 18 0 chr5 60966496 60966551 -138663599 + MLT1G LTR MaLR 474 529 -61 2279 208 10 16 chr5 60966552 60966928 -138663222 - L1 LINE L1 -2841 4021 3649 2098 66 102 0 chr5 60966928 60967202 -138662948 - AluY SINE Alu -9 302 1 2279 208 10 16 chr5 60967202 60967431 -138662719 - L1 LINE L1 -3213 3649 3420 2221 117 0 7 chr5 60967431 60967729 -138662421 + AluSg1 SINE Alu 1 296 -13 15663 106 41 24 chr5 60967737 60970091 -138660059 + L1PA7 LINE L1 11 2324 -3830 185 0 40 0 chr5 60970091 60970116 -138660034 + (CAA)n Simple_repeat Simple_repeat 2 27 0 15663 106 41 24 chr5 60970116 60973212 -138656938 + L1PA7 LINE L1 2324 5527 -627 2418 91 0 0 chr5 60973212 60973510 -138656640 + AluSc SINE Alu 1 298 -11 15663 106 41 24 chr5 60973510 60974148 -138656002 + L1PA7 LINE L1 5527 6153 -1 8043 131 51 5 chr5 60974169 60976118 -138654032 - L1PBa LINE L1 -3433 3429 1392 505 237 124 0 chr5 60976116 60976285 -138653865 - L1PBa LINE L1 -6667 196 7 * 2386 77 0 3 chr5 60976326 60976626 -138653524 + AluSx SINE Alu 1 299 -13 243 0 0 0 chr5 60976674 60976701 -138653449 + (CA)n Simple_repeat Simple_repeat 1 27 0 505 194 74 0 chr5 60976716 60976824 -138653326 + FLAM_C SINE Alu 1 116 -17 20407 136 52 19 chr5 60977183 60980369 -138649781 + L1M1 LINE L1 15 3349 -4216 1980 127 14 7 chr5 60980369 60980504 -138649646 + AluSq SINE Alu 1 134 -191 1931 103 66 4 chr5 60980504 60980777 -138649373 + AluSg SINE Alu 1 290 -20 1980 127 14 7 chr5 60980777 60980964 -138649186 + AluSq SINE Alu 134 325 0 20407 136 52 19 chr5 60980964 60981636 -138648514 + L1M1 LINE L1 3349 3998 -3567 339 303 55 0 chr5 60982125 60982234 -138647916 + L2 LINE L2 3199 3313 0 380 231 51 17 chr5 60984487 60984604 -138645546 + MLT1L LTR MaLR 491 611 -4 248 204 0 0 chr5 60985114 60985158 -138644992 - MER5B DNA MER1_type -134 44 1 1225 162 56 104 chr5 60985247 60985644 -138644506 - MLT2B3 LTR ERVL 0 554 183 2001 149 3 7 chr5 60985651 60985959 -138644191 - AluJb SINE Alu -3 309 3 480 168 35 9 chr5 60985962 60986075 -138644075 - L1 LINE L1 -1899 4247 4132 273 225 84 0 chr5 60986081 60986152 -138643998 + MER2 DNA MER2_type 1 77 -268 1795 183 3 3 chr5 60986153 60986443 -138643707 + AluJb SINE Alu 1 290 -22 584 232 67 12 chr5 60986620 60986784 -138643366 + MLT1B LTR MaLR 168 340 -50 7076 198 40 12 chr5 60986797 60987323 -138642827 - L1 LINE L1 -2037 4109 3599 2384 71 27 0 chr5 60987323 60987619 -138642531 - AluSp SINE Alu -9 304 1 7076 198 40 12 chr5 60987619 60988843 -138641307 - L1 LINE L1 -2547 3599 2309 1585 123 8 87 chr5 60989124 60989498 -138640652 - MER4A LTR ERV1 -1 663 261 422 143 77 0 chr5 60989498 60989589 -138640561 - MER4A LTR ERV1 -566 98 1 340 278 35 0 chr5 60990323 60990438 -138639712 - MARNA DNA Mariner -61 525 407 232 339 35 29 chr5 60990666 60990803 -138639347 - MARNA DNA Mariner -400 186 46 1018 217 14 5 chr5 60990803 60991020 -138639130 + MER20 DNA MER1_type 1 219 0 232 339 35 29 chr5 60991020 60991056 -138639094 - MARNA DNA Mariner -540 46 12 5110 99 34 16 chr5 60991372 60992138 -138638012 - LTR17 LTR ERV1 0 780 1 598 152 181 0 chr5 60994682 60994787 -138635363 - FLAM_A SINE Alu -9 124 1 823 186 43 62 chr5 60995841 60996051 -138634099 - L1PA16 LINE L1 -19 6147 5942 1843 161 7 3 chr5 60996096 60996401 -138633749 + AluJb SINE Alu 1 306 -6 430 291 71 106 chr5 60996445 60996699 -138633451 - MIR SINE MIR -14 248 4 2344 109 3 0 chr5 60997205 60997517 -138632633 - AluSq SINE Alu 0 313 1 1470 247 77 39 chr5 60997517 60998129 -138632021 - L1MC4a LINE L1 -1920 5888 5254 457 339 41 25 chr5 60998167 60998483 -138631667 - L1MC4a LINE L1 -986 5160 4840 2023 100 10 65 chr5 60998569 60998879 -138631271 - AluSx SINE Alu -19 293 1 653 104 9 0 chr5 60998948 60999054 -138631096 - L1MB3 LINE L1 -37 6146 6040 301 231 0 16 chr5 60999079 60999162 -138630988 - HsTC2 DNA Tc2 -1802 96 17 391 330 84 16 chr5 60999226 60999417 -138630733 - L1MC4a LINE L1 -1313 4833 4630 247 279 170 0 chr5 61000187 61000334 -138629816 + L1ME4a LINE L1 5662 5833 -288 2244 68 13 55 chr5 61000399 61000707 -138629443 - AluY SINE Alu -16 295 1 266 191 105 48 chr5 61000955 61001060 -138629090 + L1ME4a LINE L1 6002 6112 -9 378 253 240 14 chr5 61001106 61001252 -138628898 - MIR3 SINE MIR -7 201 23 315 387 0 26 chr5 61002214 61002368 -138627782 + MIR SINE MIR 15 163 -67 190 352 34 0 chr5 61003844 61003932 -138626218 - L3 LINE CR1 -102 1475 1385 4904 131 27 57 chr5 61004304 61005292 -138624858 - L1MA7 LINE L1 -13 6278 5320 222 397 24 0 chr5 61005293 61005419 -138624731 - MER5B DNA MER1_type -48 130 2 727 229 93 0 chr5 61005444 61005627 -138624523 - MIR SINE MIR -40 222 23 31 0 0 0 chr5 61005786 61005817 -138624333 + AT_rich Low_complexity Low_complexity 1 31 0 2156 129 3 3 chr5 61006134 61006443 -138623707 - AluSx SINE Alu -3 309 1 1582 111 124 22 chr5 61006502 61006817 -138623333 + THE1C LTR MaLR 29 375 0 10310 112 34 10 chr5 61006817 61006952 -138623198 + THE1C-int LTR MaLR 1 131 -1449 2329 89 3 3 chr5 61006952 61007255 -138622895 + AluSp SINE Alu 1 303 -10 10310 112 34 10 chr5 61007255 61008661 -138621489 + THE1C-int LTR MaLR 131 1580 0 1866 141 76 20 chr5 61008661 61009016 -138621134 + THE1C LTR MaLR 1 375 0 978 331 65 17 chr5 61009412 61009947 -138620203 + L2 LINE L2 1854 2414 -900 2340 97 59 13 chr5 61009983 61010373 -138619777 - L1MA2 LINE L1 0 6304 5897 21 0 0 0 chr5 61010407 61010428 -138619722 + AT_rich Low_complexity Low_complexity 1 21 0 3420 171 36 1 chr5 61010486 61011151 -138618999 - L1PA16 LINE L1 -6 6160 5473 7873 181 17 37 chr5 61011152 61012298 -138617852 - L1 LINE L1 -767 5379 4283 2330 97 0 3 chr5 61012298 61012597 -138617553 + AluSg SINE Alu 1 298 -12 7873 181 17 37 chr5 61012597 61013314 -138616836 - L1 LINE L1 -1863 4283 3553 23 0 0 0 chr5 61013332 61013355 -138616795 + AT_rich Low_complexity Low_complexity 1 23 0 404 240 128 0 chr5 61013414 61013539 -138616611 - MER103 DNA DNA -1 165 25 340 284 77 46 chr5 61013608 61013802 -138616348 - L1 LINE L1 -1164 4982 4783 238 219 61 61 chr5 61014608 61014722 -138615428 + LTR33 LTR ERVL 52 165 -356 992 198 28 12 chr5 61014801 61015048 -138615102 - MLT1A1 LTR MaLR 0 365 115 329 225 75 12 chr5 61015755 61015835 -138614315 - MIR SINE MIR -161 101 17 1783 159 52 7 chr5 61016361 61016651 -138613499 + AluJb SINE Alu 1 303 -9 658 269 16 53 chr5 61016845 61017052 -138613098 + MIR3 SINE MIR 1 204 -4 2032 141 0 10 chr5 61017288 61017592 -138612558 - AluJb SINE Alu -11 301 1 3282 143 20 22 chr5 61019773 61019965 -138610185 + L1MB3 LINE L1 5583 5774 -409 2044 147 3 0 chr5 61019965 61020265 -138609885 + AluSx SINE Alu 1 301 -11 3282 143 20 22 chr5 61020265 61020673 -138609477 + L1MB3 LINE L1 5774 6182 -1 1042 162 16 16 chr5 61021633 61021818 -138608332 - MER5A DNA MER1_type 0 189 5 419 309 46 46 chr5 61021827 61022002 -138608148 - MER5B DNA MER1_type -2 176 2 277 300 200 8 chr5 61022002 61022131 -138608019 - MIR3 SINE MIR -52 156 3 32 26 0 0 chr5 61023404 61023443 -138606707 + AT_rich Low_complexity Low_complexity 1 39 0 204 299 75 0 chr5 61024608 61024675 -138605475 - L3b LINE CR1 -82 1501 1430 882 92 33 0 chr5 61025033 61025153 -138604997 - AluSp/q SINE Alu -8 305 182 7655 30 0 0 chr5 61026513 61027721 -138602429 + L1PA3 LINE L1 4948 6155 0 951 224 107 18 chr5 61028960 61029376 -138600774 + L1ME3 LINE L1 5671 6153 -9 281 231 11 0 chr5 61030783 61030874 -138599276 + L1ME4a LINE L1 5727 5818 -303 302 284 104 22 chr5 61031394 61031528 -138598622 + L1ME4a LINE L1 5975 6119 -2 2405 79 0 0 chr5 61031685 61031976 -138598174 - AluSg SINE Alu -19 291 1 243 0 0 0 chr5 61032931 61032958 -138597192 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 23 24 0 24 chr5 61034377 61034391 -138595759 + AT_rich Low_complexity Low_complexity 1 14 -26 2194 103 34 0 chr5 61034391 61034682 -138595468 - AluSq SINE Alu -12 301 1 23 24 0 24 chr5 61034682 61034708 -138595442 + AT_rich Low_complexity Low_complexity 14 40 0 24 53 0 0 chr5 61035354 61035392 -138594758 + AT_rich Low_complexity Low_complexity 1 38 0 931 214 127 58 chr5 61036133 61036718 -138593432 + L1MC5 LINE L1 7301 7925 -36 484 227 74 45 chr5 61037359 61037535 -138592615 - MLT1J LTR MaLR -294 217 37 24 53 0 0 chr5 61037790 61037828 -138592322 + AT_rich Low_complexity Low_complexity 1 38 0 238 257 56 42 chr5 61037920 61038071 -138592079 - MLT1G LTR MaLR 0 595 388 843 221 143 32 chr5 61038134 61038443 -138591707 - MLT1G LTR MaLR -273 322 1 1300 199 75 8 chr5 61039213 61039479 -138590671 - AluJo SINE Alu -15 297 14 246 175 0 50 chr5 61039626 61039706 -138590444 + (TTATA)n Simple_repeat Simple_repeat 2 77 0 725 257 104 5 chr5 61039754 61039956 -138590194 + MIR SINE MIR 3 224 -38 1490 268 168 13 chr5 61039956 61040699 -138589451 + L2 LINE L2 2425 3297 -16 195 42 0 0 chr5 61040701 61040725 -138589425 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 280 279 147 22 chr5 61040789 61040925 -138589225 - L2 LINE L2 -2 3311 3159 1275 138 0 0 chr5 61040955 61041156 -138588994 - AluSg SINE Alu 0 308 108 5209 129 59 3 chr5 61041158 61042305 -138587845 + L1PA13 LINE L1 4950 6158 -5 188 88 59 0 chr5 61044040 61044074 -138586076 + GA-rich Low_complexity Low_complexity 4 39 0 2979 189 19 23 chr5 61044370 61045252 -138584898 - L1 LINE L1 -3346 4219 3340 351 0 0 0 chr5 61045258 61045297 -138584853 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1106 210 10 10 chr5 61045300 61045445 -138584705 - AluSq SINE Alu -30 283 136 1852 124 58 4 chr5 61045445 61045720 -138584430 - AluSg SINE Alu -20 290 1 1106 210 10 10 chr5 61045720 61045774 -138584376 - AluSq SINE Alu -176 137 84 1071 49 0 0 chr5 61045874 61045996 -138584154 - AluSg SINE Alu -188 122 1 2186 137 0 0 chr5 61046378 61046685 -138583465 - AluSx SINE Alu -5 307 1 465 178 33 46 chr5 61046695 61046847 -138583303 - L1MC4a LINE L1 -1983 5825 5676 335 261 11 11 chr5 61046849 61046941 -138583209 - L1MC4 LINE L1 -1337 6705 6614 309 184 69 35 chr5 61046982 61047069 -138583081 + L1MC4 LINE L1 6614 6703 -1339 317 187 0 22 chr5 61047074 61047165 -138582985 + (CATATA)n Simple_repeat Simple_repeat 4 92 0 1040 235 35 35 chr5 61047168 61047513 -138582637 - L1MC4a LINE L1 -2204 5604 5260 396 332 60 60 chr5 61047555 61047719 -138582431 - L1MC4a LINE L1 -943 5203 5037 381 202 21 0 chr5 61047719 61047813 -138582337 - L1MD2 LINE L1 -9 6350 6255 396 332 60 60 chr5 61047813 61047967 -138582183 - L1MC4a LINE L1 -1108 5038 4885 2083 98 24 27 chr5 61048326 61048622 -138581528 - AluSx SINE Alu -17 295 1 207 198 219 42 chr5 61048649 61048745 -138581405 - MIR SINE MIR -111 151 39 32 0 0 0 chr5 61048910 61048942 -138581208 + AT_rich Low_complexity Low_complexity 1 32 0 1418 134 0 19 chr5 61048942 61049151 -138580999 + AluSg/x SINE Alu 93 297 -13 704 300 70 9 chr5 61049945 61050172 -138579978 + MIR SINE MIR 22 262 0 386 275 158 69 chr5 61051464 61052028 -138578122 - L2 LINE L2 -836 2478 1865 1594 201 3 17 chr5 61052459 61052757 -138577393 - AluJo SINE Alu -16 296 3 1134 156 60 50 chr5 61052818 61053101 -138577049 - MSTC LTR MaLR 0 428 143 24 0 0 0 chr5 61053178 61053202 -138576948 + AT_rich Low_complexity Low_complexity 1 24 0 1600 235 34 9 chr5 61055672 61056110 -138574040 - L1ME1 LINE L1 -117 6049 5601 568 168 80 0 chr5 61056108 61056233 -138573917 - L1ME1 LINE L1 -1538 4608 4474 * 2464 66 20 0 chr5 61056671 61056974 -138573176 - AluY SINE Alu -2 309 1 595 145 51 8 chr5 61057954 61058071 -138572079 + MLT1C LTR MaLR 290 411 -56 1619 206 34 28 chr5 61058374 61058762 -138571388 - MLT1B LTR MaLR 0 390 1 320 341 99 56 chr5 61058769 61059021 -138571129 - L2 LINE L2 0 3272 3010 230 301 56 56 chr5 61059068 61059211 -138570939 + L2 LINE L2 2616 2758 -556 333 306 65 0 chr5 61059393 61059501 -138570649 + L2 LINE L2 3199 3313 0 530 269 0 7 chr5 61059806 61059955 -138570195 + Charlie8 DNA MER1_type 75 222 -2195 1284 272 114 11 chr5 61059963 61060419 -138569731 + MLT1J LTR MaLR 6 508 -3 1264 249 75 49 chr5 61060535 61061122 -138569028 + Charlie8 DNA MER1_type 367 968 -1449 2182 88 25 3 chr5 61061397 61061682 -138568468 + AluSp SINE Alu 1 291 -22 205 179 77 0 chr5 61062237 61062276 -138567874 + L2 LINE L2 3224 3265 -7 1993 127 11 0 chr5 61062479 61062763 -138567387 + AluSq SINE Alu 1 287 -26 183 42 0 0 chr5 61062763 61062787 -138567363 + (TA)n Simple_repeat Simple_repeat 2 25 0 1838 136 26 32 chr5 61062791 61063100 -138567050 + AluSx SINE Alu 1 307 -5 1726 188 3 3 chr5 61063453 61063735 -138566415 + AluJb SINE Alu 1 282 -30 2118 178 52 5 chr5 61063905 61064344 -138565806 + MLT1C LTR MaLR 8 467 0 255 310 0 0 chr5 61064445 61064532 -138565618 + L1ME LINE L1 5574 5660 -461 2350 108 3 0 chr5 61064754 61065060 -138565090 - AluSx SINE Alu -5 307 1 936 225 64 4 chr5 61066396 61066632 -138563518 + MIR SINE MIR 2 251 -11 307 273 120 107 chr5 61067485 61067811 -138562339 + L1M2 LINE L1 595 924 -5925 33 107 0 0 chr5 61068066 61068197 -138561953 + GC_rich Low_complexity Low_complexity 1 131 0 276 77 0 0 chr5 61069193 61069232 -138560918 + (A)n Simple_repeat Simple_repeat 1 39 0 1709 259 71 61 chr5 61069447 61069601 -138560549 - L2 LINE L2 0 3313 3162 2268 105 0 10 chr5 61069601 61069914 -138560236 + AluSg SINE Alu 1 310 0 1709 259 71 61 chr5 61069914 61070830 -138559320 - L2 LINE L2 -151 3162 2153 1975 141 10 0 chr5 61071163 61071454 -138558696 - AluJo SINE Alu -18 294 1 275 333 64 39 chr5 61071704 61071860 -138558290 - MER5A DNA MER1_type 0 189 30 295 328 52 9 chr5 61071897 61072013 -138558137 + L2 LINE L2 3176 3296 -17 1126 187 0 0 chr5 61073460 61073626 -138556524 - FAM SINE Alu -9 166 1 1684 149 52 99 chr5 61073669 61073870 -138556280 - MLT1A1 LTR MaLR 0 365 189 1772 178 10 3 chr5 61073870 61074168 -138555982 - AluJb SINE Alu -12 300 1 1684 149 52 99 chr5 61074168 61074349 -138555801 - MLT1A1 LTR MaLR -176 189 1 1976 130 3 23 chr5 61074421 61074721 -138555429 - AluSx SINE Alu -18 294 1 2303 87 10 7 chr5 61075037 61075336 -138554814 - AluSq SINE Alu -13 300 1 775 162 157 65 chr5 61075764 61075913 -138554237 - AluJo SINE Alu -25 287 116 183 42 0 0 chr5 61075913 61075937 -138554213 + (TTG)n Simple_repeat Simple_repeat 1 24 0 775 162 157 65 chr5 61075937 61075972 -138554178 - AluJo SINE Alu -196 116 86 296 213 0 0 chr5 61075973 61076020 -138554130 - AluSp/q SINE Alu -53 250 204 974 286 123 11 chr5 61076048 61076444 -138553706 + MLT1J2 LTR MaLR 1 444 -2 1141 259 93 34 chr5 61076608 61077237 -138552913 + L2 LINE L2 2612 3280 -33 22 0 0 0 chr5 61077241 61077263 -138552887 + AT_rich Low_complexity Low_complexity 1 22 0 3142 259 111 18 chr5 61077408 61078082 -138552068 + L2 LINE L2 1922 2532 -781 1736 155 161 16 chr5 61078082 61078398 -138551752 - MLT1A1 LTR MaLR -3 362 1 3142 259 111 18 chr5 61078398 61078893 -138551257 + L2 LINE L2 2532 3201 -112 2170 112 6 13 chr5 61079457 61079770 -138550380 + AluSx SINE Alu 1 311 -1 2160 199 69 45 chr5 61079856 61080393 -138549757 + MLT1E2 LTR MaLR 77 626 0 247 244 12 73 chr5 61081235 61081317 -138548833 + L2 LINE L2 3235 3311 -2 400 243 28 19 chr5 61081639 61081746 -138548404 + MER5C DNA MER1_type 17 124 -200 242 145 36 133 chr5 61081872 61081955 -138548195 + MER5C DNA MER1_type 249 323 -1 181 368 35 18 chr5 61082371 61082485 -138547665 - L2 LINE L2 -631 2683 2568 414 324 138 18 chr5 61082502 61082900 -138547250 - L2 LINE L2 -976 2338 1893 460 358 40 13 chr5 61083267 61083493 -138546657 + L2 LINE L2 3038 3269 -3 945 204 29 0 chr5 61083679 61083851 -138546299 - MER5B DNA MER1_type -1 177 1 1134 254 123 11 chr5 61084562 61084913 -138545237 + L2 LINE L2 2470 2859 -455 1124 120 0 0 chr5 61084915 61085065 -138545085 - AluSx SINE Alu -14 296 147 535 103 167 0 chr5 61085065 61085143 -138545007 - AluSx SINE Alu -220 92 2 984 294 89 44 chr5 61085147 61085583 -138544567 + L2 LINE L2 2858 3313 0 464 184 120 22 chr5 61088837 61089057 -138541093 + L1MC5 LINE L1 7607 7917 -44 358 218 12 123 chr5 61089225 61089395 -138540755 + L1ME4a LINE L1 5967 6117 -4 745 234 107 41 chr5 61090122 61090412 -138539738 - L2 LINE L2 0 3313 3005 186 377 0 0 chr5 61090483 61090552 -138539598 - L2 LINE L2 -510 2804 2736 198 103 0 0 chr5 61090552 61090581 -138539569 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 748 167 6 26 chr5 61090606 61090762 -138539388 - L1MB3 LINE L1 -3 6180 6028 337 277 47 37 chr5 61090762 61090981 -138539169 - L2 LINE L2 -565 2749 2447 255 315 15 39 chr5 61092045 61092175 -138537975 + MIR SINE MIR 14 140 -122 2227 105 0 3 chr5 61092326 61092620 -138537530 - AluSc SINE Alu -16 293 1 305 291 134 29 chr5 61093127 61093299 -138536851 + MIR3 SINE MIR 16 205 -3 578 210 19 51 chr5 61093367 61093524 -138536626 + LTR16C LTR ERVL 292 443 -48 784 267 54 17 chr5 61093590 61093830 -138536320 + MIR SINE MIR 13 261 -1 2482 54 0 14 chr5 61094102 61094399 -138535751 - AluY SINE Alu -18 293 1 736 228 0 0 chr5 61094476 61094599 -138535551 + FLAM_A SINE Alu 1 123 -19 21 0 0 0 chr5 61094743 61094764 -138535386 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 61094805 61094827 -138535323 + AT_rich Low_complexity Low_complexity 1 22 0 1970 150 3 0 chr5 61094863 61095163 -138534987 + AluJb SINE Alu 1 301 -11 201 74 0 0 chr5 61095279 61095306 -138534844 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1904 167 0 13 chr5 61095355 61095667 -138534483 - AluJb SINE Alu -4 308 1 281 177 25 38 chr5 61096019 61096098 -138534052 + MER116 DNA Mariner 1 78 -2 851 173 0 7 chr5 61096908 61097058 -138533092 + AluSg/x SINE Alu 155 303 -7 2422 96 0 0 chr5 61097172 61097473 -138532677 + AluSx SINE Alu 1 301 -11 201 74 0 0 chr5 61097589 61097616 -138532534 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1976 150 0 16 chr5 61097665 61097978 -138532172 - AluJo SINE Alu -4 308 1 206 198 219 42 chr5 61098005 61098101 -138532049 - MIR SINE MIR -111 151 39 32 0 0 0 chr5 61098266 61098298 -138531852 + AT_rich Low_complexity Low_complexity 1 32 0 1402 134 0 19 chr5 61098298 61098507 -138531643 + AluSg/x SINE Alu 93 297 -13 11192 72 3 8 chr5 61098731 61100159 -138529991 + L1P LINE L1 900 2321 -3825 185 0 40 0 chr5 61100159 61100184 -138529966 + (CAA)n Simple_repeat Simple_repeat 2 27 0 11192 72 3 8 chr5 61100184 61100252 -138529898 + L1P LINE L1 2321 2388 -3758 483 221 0 0 chr5 61100548 61100652 -138529498 + MER5B DNA MER1_type 75 178 0 2230 131 116 38 chr5 61100816 61101213 -138528937 - MSTA LTR MaLR 0 428 1 358 218 12 123 chr5 61102257 61102427 -138527723 + L1ME4a LINE L1 5967 6117 -4 229 266 16 0 chr5 61102954 61103018 -138527132 - MARNA DNA Mariner -115 471 407 253 365 44 0 chr5 61103246 61103383 -138526767 - MARNA DNA Mariner -400 186 44 808 214 18 61 chr5 61103383 61103612 -138526538 + MER20 DNA MER1_type 1 219 0 655 269 21 58 chr5 61104121 61104328 -138525822 + MIR3 SINE MIR 1 204 -4 2002 141 10 0 chr5 61104564 61104862 -138525288 - AluJo SINE Alu -11 301 1 2220 112 0 10 chr5 61105735 61106048 -138524102 - AluSg SINE Alu 0 310 1 305 209 180 65 chr5 61106063 61106202 -138523948 + L2 LINE L2 3159 3313 0 6511 128 39 30 chr5 61106750 61108002 -138522148 + L1M1 LINE L1 1977 3240 -4325 541 279 109 101 chr5 61108311 61109136 -138521014 + L1M2 LINE L1 344 1115 -5734 1294 201 4 20 chr5 61109238 61109482 -138520668 - AluJo SINE Alu -70 242 3 1224 167 125 45 chr5 61109543 61109878 -138520272 - MSTC LTR MaLR 0 428 67 273 118 0 106 chr5 61110558 61110643 -138519507 + L1P LINE L1 3768 3843 -2303 9928 67 10 2 chr5 61110676 61111974 -138518176 + L1P LINE L1 3840 5147 -999 526 252 16 0 chr5 61113494 61113621 -138516529 + L2 LINE L2 2731 2859 -455 1124 120 0 0 chr5 61113623 61113773 -138516377 - AluSx SINE Alu -14 296 147 535 103 167 0 chr5 61113773 61113851 -138516299 - AluSx SINE Alu -221 92 2 587 312 5 20 chr5 61113855 61114057 -138516093 + L2 LINE L2 2858 3056 -257 327 310 130 39 chr5 61114874 61115158 -138514992 - L1MC/D LINE L1 -2235 5573 5264 1480 201 0 3 chr5 61116464 61116752 -138513398 - AluSc SINE Alu -18 291 5 11985 94 8 17 chr5 61117027 61118964 -138511186 + L1P2 LINE L1 3612 5522 -632 1219 52 7 13 chr5 61118972 61119126 -138511024 + L1PA6 LINE L1 5996 6148 -6 2481 241 80 30 chr5 61119143 61119985 -138510165 + L1M4 LINE L1 3952 4835 -1311 3215 133 49 37 chr5 61120016 61120204 -138509946 - Tigger2 DNA MER2_type 0 2718 2534 2234 104 0 22 chr5 61120204 61120521 -138509629 - AluSx SINE Alu -2 310 1 3215 133 49 37 chr5 61120521 61120903 -138509247 - Tigger2 DNA MER2_type -184 2534 2141 2348 95 3 0 chr5 61122086 61122391 -138507759 - AluSx SINE Alu -6 306 1 273 320 62 10 chr5 61122662 61122759 -138507391 + MIR SINE MIR 19 120 -88 320 291 55 0 chr5 61122779 61122889 -138507261 - MER117 DNA MER1_type -7 190 75 740 165 45 0 chr5 61123249 61123382 -138506768 + MER47A DNA MER2_type 2 140 -226 1834 87 0 0 chr5 61124470 61124722 -138505428 + L1P3 LINE L1 4320 4571 -1575 1118 93 6 39 chr5 61124699 61124881 -138505269 + L1P3 LINE L1 5461 5636 -518 * 7367 40 12 1 chr5 61124881 61126479 -138503671 + L1PA4 LINE L1 4551 6155 0 1389 90 0 0 chr5 61126491 61126669 -138503481 + AluY SINE Alu 120 297 -14 266 225 56 11 chr5 61127122 61127211 -138502939 + MARNA DNA Mariner 202 294 -292 224 363 62 3 chr5 61127367 61127540 -138502610 - MIR SINE MIR -2 260 70 618 256 26 62 chr5 61127957 61128184 -138501966 + LTR16A1 LTR ERVL 225 443 -14 428 248 70 0 chr5 61128389 61128518 -138501632 + MIR SINE MIR 76 213 -49 183 42 0 0 chr5 61129400 61129424 -138500726 + (TC)n Simple_repeat Simple_repeat 1 24 0 3262 162 44 20 chr5 61130778 61131366 -138498784 - ERVL LTR ERVL -1286 4478 3877 1954 193 28 16 chr5 61131365 61131982 -138498168 - ERVL LTR ERVL -2026 3738 3036 * 1035 283 86 4 chr5 61132087 61132578 -138497572 + L1MC4a LINE L1 5293 5881 -1927 718 306 11 62 chr5 61132681 61132956 -138497194 - ERVL LTR ERVL -1912 3084 2824 1075 296 93 42 chr5 61133076 61133691 -138496459 - ERVL LTR ERVL -3303 2461 1816 247 308 44 0 chr5 61137504 61137595 -138492555 + L2 LINE L2 3198 3292 -21 336 254 16 48 chr5 61138118 61138244 -138491906 - MIR SINE MIR -82 180 59 2388 61 10 10 chr5 61138543 61138860 -138491290 - AluY SINE Alu 0 317 1 42581 57 6 8 chr5 61141318 61147490 -138482660 + L1PA5 LINE L1 4 6152 -2 490 194 206 12 chr5 61148612 61148772 -138481378 + MIR SINE MIR 17 207 -55 361 314 7 36 chr5 61149737 61149877 -138480273 - L2 LINE L2 0 3272 3137 1837 144 138 6 chr5 61150014 61150369 -138479781 + L1MA4 LINE L1 5884 6285 -15 559 187 0 15 chr5 61150370 61150504 -138479646 + GA-rich Low_complexity Low_complexity 1 132 0 433 284 173 0 chr5 61150579 61150804 -138479346 - L2 LINE L2 -358 2956 2693 611 291 80 12 chr5 61150817 61151244 -138478906 - L1MC/D LINE L1 -771 5375 5215 2307 107 0 0 chr5 61151272 61151570 -138478580 - AluSx SINE Alu -12 300 3 353 207 201 30 chr5 61151701 61151865 -138478285 - L1MC/D LINE L1 -2688 3458 3267 5119 155 20 74 chr5 61151960 61152666 -138477484 - L1MB4 LINE L1 -36 6144 5401 2150 134 0 3 chr5 61152666 61152972 -138477178 - AluSx SINE Alu -7 305 1 5119 155 20 74 chr5 61152972 61153279 -138476871 - L1MB4 LINE L1 -779 5401 5079 1809 153 42 11 chr5 61153279 61153566 -138476584 - AluJb SINE Alu -16 296 1 5119 155 20 74 chr5 61153566 61154608 -138475542 - L1MB4 LINE L1 -1101 5079 4199 1612 137 0 8 chr5 61154608 61154852 -138475298 + Tigger1 DNA MER2_type 1 242 -2176 558 146 31 10 chr5 61154852 61154948 -138475202 + MER4A LTR ERV1 1 98 -566 1909 144 169 11 chr5 61154948 61155296 -138474854 + MER4A LTR ERV1 261 663 -1 14253 115 38 5 chr5 61155297 61157406 -138472744 + Tigger1 DNA MER2_type 239 2416 -2 4529 214 85 29 chr5 61157407 61158652 -138471498 - L1MB4 LINE L1 -1945 4201 3027 2421 95 0 3 chr5 61158652 61158956 -138471194 + AluSx SINE Alu 1 303 -9 4529 214 85 29 chr5 61158956 61158971 -138471179 - L1MB4 LINE L1 -3119 3027 3014 2328 104 3 0 chr5 61158971 61159268 -138470882 + AluSp SINE Alu 1 298 -15 4529 214 85 29 chr5 61159268 61159363 -138470787 - L1MB4 LINE L1 -3132 3014 2769 203 240 20 0 chr5 61159398 61159448 -138470702 + (TG)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr5 61159451 61159473 -138470677 + AT_rich Low_complexity Low_complexity 1 22 0 1541 209 35 0 chr5 61159505 61159788 -138470362 - AluJb SINE Alu -19 293 1 5324 134 20 26 chr5 61159788 61160296 -138469854 - L1PB3 LINE L1 -6 6150 5640 2090 127 3 13 chr5 61160296 61160595 -138469555 + AluSx SINE Alu 1 296 -16 5324 134 20 26 chr5 61160595 61161591 -138468559 - L1PB3 LINE L1 -516 5640 4677 366 221 63 0 chr5 61161581 61161676 -138468474 - L1MB4 LINE L1 -3361 2785 2685 * 3296 244 47 22 chr5 61161702 61161862 -138468288 - L1M4c LINE L1 -3873 2952 2798 1509 138 5 0 chr5 61161862 61162080 -138468070 - AluSg/x SINE Alu -11 299 81 3296 244 47 22 chr5 61162080 61163345 -138466805 - L1M4c LINE L1 -4027 2798 1353 1530 141 5 0 chr5 61163347 61163567 -138466583 - AluSq SINE Alu -92 221 1 1346 219 44 31 chr5 61163583 61163908 -138466242 - L1M4c LINE L1 -5362 1180 848 2135 114 24 7 chr5 61163908 61164206 -138465944 - AluSx SINE Alu -9 303 1 1346 219 44 31 chr5 61164206 61164240 -138465910 - L1M4c LINE L1 -5694 848 816 359 204 22 30 chr5 61164312 61164395 -138465755 + GA-rich Low_complexity Low_complexity 1 83 -729 1247 211 61 21 chr5 61164395 61164675 -138465475 + AluJo SINE Alu 1 291 -21 2384 104 0 0 chr5 61164685 61164994 -138465156 + AluSc SINE Alu 1 309 0 359 204 22 30 chr5 61164994 61165131 -138465019 + GA-rich Low_complexity Low_complexity 92 812 0 1910 177 0 3 chr5 61165140 61165439 -138464711 + AluJo SINE Alu 2 299 -13 249 118 0 59 chr5 61165439 61165507 -138464643 + (GGGA)n Simple_repeat Simple_repeat 2 65 0 817 323 42 26 chr5 61165538 61165922 -138464228 - L1M4c LINE L1 -5758 784 395 1684 156 50 7 chr5 61166003 61166285 -138463865 + AluJo SINE Alu 7 300 -12 2411 86 0 10 chr5 61166400 61166713 -138463437 + AluY SINE Alu 1 310 -1 971 205 14 14 chr5 61166734 61166944 -138463206 - L1M4 LINE L1 -1931 4215 4006 1991 135 25 3 chr5 61166967 61167293 -138462857 - L1MA6 LINE L1 0 6300 5968 2550 150 30 7 chr5 61167297 61167703 -138462447 + MSTB LTR MaLR 1 415 -11 7217 185 12 15 chr5 61167711 61169016 -138461134 + MSTB-int LTR MaLR 1 1302 -349 180 0 0 0 chr5 61169064 61169084 -138461066 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 506 139 111 19 chr5 61169084 61169183 -138460967 - FRAM SINE Alu -148 164 53 930 102 36 15 chr5 61169198 61169335 -138460815 + MSTB LTR MaLR 287 426 0 2362 121 11 0 chr5 61169335 61169690 -138460460 - L1MA6 LINE L1 -340 5960 5602 441 266 38 55 chr5 61169969 61170206 -138459944 - L2 LINE L2 -558 2756 2524 2227 106 0 20 chr5 61170210 61170377 -138459773 - AluSx SINE Alu -13 299 139 2401 77 7 7 chr5 61170377 61170677 -138459473 - AluSq SINE Alu -13 300 1 2227 106 0 20 chr5 61170677 61170812 -138459338 - AluSx SINE Alu -173 139 3 195 267 160 0 chr5 61170905 61170980 -138459170 - MIR SINE MIR -12 250 164 2222 129 0 0 chr5 61171319 61171621 -138458529 + AluSx SINE Alu 1 302 -10 2254 103 3 3 chr5 61172396 61172696 -138457454 - AluSx SINE Alu -12 300 1 690 230 27 10 chr5 61172840 61173034 -138457116 - L1MEc LINE L1 -4534 1681 1542 2220 99 0 20 chr5 61173042 61173344 -138456806 - AluSx SINE Alu -16 296 1 898 232 68 30 chr5 61173383 61173772 -138456378 - L1MEc LINE L1 -4713 1502 1125 417 20 0 0 chr5 61173773 61173823 -138456327 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 7324 55 25 36 chr5 61173823 61175485 -138454665 - SVA Other Other -518 1363 7 418 200 37 67 chr5 61175486 61175621 -138454529 - L1MEc LINE L1 -5246 1150 1020 1786 126 66 30 chr5 61175621 61175758 -138454392 + AluSx SINE Alu 1 132 -180 2100 103 3 13 chr5 61175758 61176069 -138454081 + AluSg SINE Alu 1 308 -2 1786 126 66 30 chr5 61176069 61176232 -138453918 + AluSx SINE Alu 132 312 0 2108 113 0 3 chr5 61176232 61176533 -138453617 + AluSx SINE Alu 1 300 -12 2261 88 3 0 chr5 61176548 61176844 -138453306 - AluSp SINE Alu -16 297 1 656 147 0 0 chr5 61176851 61176960 -138453190 - AluSg/x SINE Alu 0 312 204 3654 230 42 19 chr5 61176998 61177217 -138452933 - L1MEc LINE L1 -5424 972 760 2207 100 7 0 chr5 61177217 61177518 -138452632 - AluSq SINE Alu -10 303 1 3654 230 42 19 chr5 61177518 61178242 -138451908 - L1MEc LINE L1 -5636 760 7 932 224 4 21 chr5 61178264 61178501 -138451649 + L1MA4 LINE L1 6068 6300 0 280 332 8 38 chr5 61179091 61179248 -138450902 + MIR SINE MIR 30 180 -71 2053 112 0 7 chr5 61179469 61179783 -138450367 - AluSx SINE Alu 0 312 1 2056 120 7 0 chr5 61180786 61181078 -138449072 - AluSq SINE Alu -19 294 1 1894 150 3 0 chr5 61181527 61181821 -138448329 - AluSx SINE Alu -17 295 1 14400 109 23 85 chr5 61182013 61182339 -138447811 - Tigger1 DNA MER2_type 0 2418 2073 1694 160 17 14 chr5 61182339 61182627 -138447523 - AluJb SINE Alu -23 289 1 14400 109 23 85 chr5 61182627 61182694 -138447456 - Tigger1 DNA MER2_type -345 2073 2003 2107 125 3 10 chr5 61182694 61183007 -138447143 - AluSx SINE Alu -1 311 1 14400 109 23 85 chr5 61183007 61183947 -138446203 - Tigger1 DNA MER2_type -415 2003 1007 1629 157 43 0 chr5 61183947 61184228 -138445922 + AluJb SINE Alu 9 301 -11 14400 109 23 85 chr5 61184228 61185469 -138444681 - Tigger1 DNA MER2_type -1411 1007 1 275 191 16 0 chr5 61186368 61186431 -138443719 + CT-rich Low_complexity Low_complexity 1 64 0 604 135 10 39 chr5 61186566 61186655 -138443495 - AluJo SINE Alu -92 220 133 2047 89 24 7 chr5 61186655 61186946 -138443204 - AluSg SINE Alu -3 307 12 604 135 10 39 chr5 61186946 61186960 -138443190 - AluJo SINE Alu -179 133 120 1733 162 0 23 chr5 61187188 61187490 -138442660 + AluJb SINE Alu 1 295 -17 425 297 55 21 chr5 61187918 61188063 -138442087 - MIR SINE MIR -112 150 1 2432 53 20 0 chr5 61188936 61189239 -138440911 - AluY SINE Alu -2 309 1 1927 119 27 7 chr5 61189239 61189532 -138440618 - AluSx SINE Alu -13 299 1 1972 127 0 3 chr5 61189561 61189845 -138440305 - AluSx SINE Alu -29 283 1 1142 216 81 72 chr5 61189866 61190035 -138440115 - L1ME3A LINE L1 -9 6169 6003 1890 148 0 0 chr5 61190035 61190333 -138439817 + AluSx SINE Alu 13 310 -2 1142 216 81 72 chr5 61190333 61190584 -138439566 - L1ME3A LINE L1 -175 6003 5785 2122 107 0 7 chr5 61191089 61191387 -138438763 + AluSx SINE Alu 1 296 -16 2143 89 3 10 chr5 61192687 61192990 -138437160 + AluSq SINE Alu 1 301 -12 2078 121 0 3 chr5 61193087 61193384 -138436766 - AluSx SINE Alu -16 296 1 514 192 20 10 chr5 61193670 61193769 -138436381 - MIR SINE MIR -112 150 51 243 235 0 59 chr5 61193829 61193897 -138436253 - MIR SINE MIR -16 246 183 1718 154 0 17 chr5 61193923 61194221 -138435929 + AluJb SINE Alu 6 298 -14 540 226 136 32 chr5 61194440 61194595 -138435555 + AluJb SINE Alu 137 307 -5 1618 152 34 24 chr5 61194853 61195149 -138435001 - AluSq SINE Alu -14 299 1 2049 103 10 0 chr5 61195426 61195716 -138434434 - AluSx SINE Alu -18 294 2 1515 155 40 37 chr5 61195922 61196219 -138433931 - AluJb SINE Alu -14 298 1 2554 29 0 13 chr5 61196255 61196563 -138433587 + AluY SINE Alu 1 304 -7 1914 112 0 3 chr5 61198161 61198468 -138431682 - AluSx SINE Alu 0 306 1 2127 65 0 4 chr5 61198489 61198768 -138431382 - AluY SINE Alu -2 309 32 278 350 64 35 chr5 61198948 61199151 -138430999 - MIR SINE MIR -6 256 48 2186 88 7 0 chr5 61199542 61199836 -138430314 - AluSg SINE Alu -14 296 1 2124 98 0 3 chr5 61199920 61200215 -138429935 - AluSg SINE Alu -14 296 3 1742 167 7 7 chr5 61200217 61200517 -138429633 - AluJo SINE Alu -12 300 1 385 130 119 33 chr5 61200527 61200619 -138429531 - AluYb8 SINE Alu -3 305 243 2129 110 3 3 chr5 61200679 61200978 -138429172 + AluSx SINE Alu 2 300 -12 187 229 0 0 chr5 61201317 61201352 -138428798 - MIR SINE MIR -143 65 31 231 313 0 31 chr5 61201936 61202000 -138428150 + MIR SINE MIR 21 82 -126 1879 145 0 3 chr5 61202082 61202372 -138427778 + AluJb SINE Alu 1 289 -23 1771 154 11 0 chr5 61203098 61203383 -138426767 - AluJo SINE Alu -24 288 1 213 346 74 0 chr5 61203818 61203899 -138426251 + L2 LINE L2 3168 3254 -18 2531 156 139 0 chr5 61204635 61205140 -138425010 - MER90 LTR ERV1 0 575 1 26 0 0 0 chr5 61205381 61205407 -138424743 + AT_rich Low_complexity Low_complexity 1 26 0 1737 262 135 18 chr5 61205415 61206382 -138423768 - L2 LINE L2 0 3313 2224 1054 305 102 20 chr5 61206468 61206957 -138423193 - L2 LINE L2 -1830 1484 956 2139 108 0 3 chr5 61206971 61207266 -138422884 - AluSq SINE Alu -17 296 3 2265 91 0 0 chr5 61207330 61207626 -138422524 + AluSg SINE Alu 1 296 -14 2030 127 0 13 chr5 61207732 61208046 -138422104 - AluJb SINE Alu -2 310 1 1495 186 17 14 chr5 61208302 61208593 -138421557 + AluJo SINE Alu 1 292 -20 2088 107 10 0 chr5 61210519 61210827 -138419323 + AluSx SINE Alu 2 312 0 25 0 0 0 chr5 61211732 61211757 -138418393 + AT_rich Low_complexity Low_complexity 1 25 0 1864 102 0 37 chr5 61212955 61213249 -138416901 - AluSx SINE Alu -16 296 14 184 367 70 16 chr5 61213892 61214020 -138416130 + L2 LINE L2 2335 2469 -845 442 335 40 6 chr5 61214326 61214502 -138415648 - MIR3 SINE MIR -11 197 16 745 181 0 15 chr5 61214506 61214639 -138415511 - FLAM_A SINE Alu -2 131 1 606 283 30 35 chr5 61214760 61214958 -138415192 - L2 LINE L2 -1 3312 3116 2340 42 3 45 chr5 61214959 61215270 -138414880 - AluY SINE Alu -13 298 1 882 204 87 24 chr5 61215286 61215492 -138414658 - MIR SINE MIR -2 260 42 318 221 31 79 chr5 61216024 61216151 -138413999 - L1ME3 LINE L1 -81 6081 5961 1562 179 131 148 chr5 61216247 61217065 -138413085 - L1MC5 LINE L1 -430 7531 6728 587 327 77 41 chr5 61217225 61217983 -138412167 - HAL1b LINE L1 -503 845 61 1436 170 4 0 chr5 61218229 61218464 -138411686 - MER46A DNA MER2_type 0 236 1 982 178 22 67 chr5 61219124 61219315 -138410835 - AluJo SINE Alu -11 301 120 2341 64 0 0 chr5 61219315 61219610 -138410540 + AluY SINE Alu 1 295 -16 982 178 22 67 chr5 61219610 61219643 -138410507 - AluJo SINE Alu -192 120 87 1940 148 0 0 chr5 61219692 61219995 -138410155 + AluSx SINE Alu 1 303 -9 2034 98 14 20 chr5 61220105 61220401 -138409749 + AluSc SINE Alu 1 294 -15 356 286 12 0 chr5 61220903 61220987 -138409163 - L2 LINE L2 -1 3271 3187 757 287 156 26 chr5 61221044 61221776 -138408374 + L1ME4a LINE L1 5277 6105 -16 2068 127 13 0 chr5 61221843 61222151 -138407999 - AluSx SINE Alu 0 312 1 807 138 0 8 chr5 61223134 61223264 -138406886 + FLAM_C SINE Alu 12 140 -3 2005 129 0 16 chr5 61223274 61223584 -138406566 + AluSq SINE Alu 6 310 -3 1419 172 7 32 chr5 61223591 61223870 -138406280 + AluJo SINE Alu 40 311 -1 204 200 0 0 chr5 61224594 61224634 -138405516 + L2 LINE L2 3229 3268 -4 840 267 58 64 chr5 61226125 61226443 -138403707 + L1MC5 LINE L1 7363 7678 -283 2237 88 3 14 chr5 61226443 61226738 -138403412 + AluSg SINE Alu 1 292 -18 840 267 58 64 chr5 61226738 61226985 -138403165 + L1MC5 LINE L1 7678 7925 -36 854 130 0 0 chr5 61228011 61228126 -138402024 + FLAM_C SINE Alu 1 115 -28 42 0 0 0 chr5 61228128 61228170 -138401980 + AT_rich Low_complexity Low_complexity 1 42 0 1632 196 0 7 chr5 61228175 61228456 -138401694 + AluJb SINE Alu 6 284 -28 315 0 0 0 chr5 61228456 61228491 -138401659 + (CA)n Simple_repeat Simple_repeat 2 36 0 1916 161 3 0 chr5 61228503 61228808 -138401342 + AluJb SINE Alu 1 306 -6 2287 102 0 0 chr5 61228980 61229273 -138400877 + AluSc SINE Alu 1 293 -16 2306 110 0 0 chr5 61229499 61229798 -138400352 + AluSg SINE Alu 1 299 -11 2105 87 70 0 chr5 61230393 61230680 -138399470 + AluSx SINE Alu 1 307 -5 1000 144 0 86 chr5 61232856 61233043 -138397107 - FAM SINE Alu -4 171 1 518 300 57 22 chr5 61233193 61233288 -138396862 + MIR SINE MIR 13 103 -159 2014 137 10 0 chr5 61233288 61233581 -138396569 - AluSg1 SINE Alu -13 296 1 518 300 57 22 chr5 61233581 61233712 -138396438 + MIR SINE MIR 103 247 -15 184 176 59 39 chr5 61234434 61234485 -138395665 - L3 LINE CR1 -258 1319 1268 2408 81 0 7 chr5 61234956 61235254 -138394896 + AluSc SINE Alu 1 296 -13 23 0 0 0 chr5 61235345 61235368 -138394782 + AT_rich Low_complexity Low_complexity 1 23 0 1133 280 71 29 chr5 61235429 61235522 -138394628 + HAL1b LINE L1 311 399 -949 2248 108 0 0 chr5 61235522 61235817 -138394333 + AluSx SINE Alu 1 295 -17 1133 280 71 29 chr5 61235817 61236176 -138393974 + HAL1b LINE L1 399 782 -566 1667 185 0 17 chr5 61236303 61236590 -138393560 + AluJo SINE Alu 1 282 -30 2242 112 0 19 chr5 61236739 61237051 -138393099 - AluSx SINE Alu -6 306 1 198 85 43 21 chr5 61237136 61237183 -138392967 + (TA)n Simple_repeat Simple_repeat 1 48 0 1804 159 0 32 chr5 61237740 61238048 -138392102 - AluJo SINE Alu -14 298 1 311 299 77 26 chr5 61238372 61238566 -138391584 + L1MC4a LINE L1 4284 4487 -1659 1646 274 139 19 chr5 61238709 61239466 -138390684 + L1MC4a LINE L1 5268 5582 -598 21 36 0 0 chr5 61240663 61240691 -138389459 + AT_rich Low_complexity Low_complexity 1 28 0 428 247 18 38 chr5 61241023 61241194 -138388956 + MIR SINE MIR 48 262 0 277 284 25 0 chr5 61241896 61241977 -138388173 + L1MC4a LINE L1 5815 5897 -1911 21 71 0 0 chr5 61242746 61242788 -138387362 + AT_rich Low_complexity Low_complexity 1 42 0 2398 77 20 0 chr5 61242877 61243174 -138386976 + AluY SINE Alu 1 303 -8 2072 110 28 3 chr5 61243178 61243468 -138386682 + AluSp SINE Alu 1 297 -16 37 23 0 0 chr5 61244469 61244513 -138385637 + AT_rich Low_complexity Low_complexity 1 44 0 336 301 68 20 chr5 61247455 61247601 -138382549 + L1ME4a LINE L1 5622 5774 -396 220 216 233 43 chr5 61247688 61247804 -138382346 + MIR3 SINE MIR 20 157 -51 563 263 31 50 chr5 61248149 61248309 -138381841 - MIR SINE MIR -81 181 25 2387 60 0 41 chr5 61248413 61248727 -138381423 - AluY SINE Alu -10 301 1 2173 95 44 0 chr5 61249420 61249716 -138380434 - AluSg SINE Alu -1 309 1 23 0 0 0 chr5 61250114 61250137 -138380013 + AT_rich Low_complexity Low_complexity 1 23 0 195 257 99 20 chr5 61250469 61250570 -138379580 + MIR3 SINE MIR 78 186 -22 22 0 0 0 chr5 61250615 61250637 -138379513 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 61251824 61251852 -138378298 + AT_rich Low_complexity Low_complexity 1 28 0 180 296 157 19 chr5 61254078 61254186 -138375964 - L2 LINE L2 -13 3259 3137 24 53 0 0 chr5 61256276 61256314 -138373836 + AT_rich Low_complexity Low_complexity 1 38 0 284 237 215 60 chr5 61256947 61257028 -138373122 + L1ME4a LINE L1 5757 5824 -297 1890 157 3 0 chr5 61257028 61257327 -138372823 + AluJo SINE Alu 1 300 -12 284 237 215 60 chr5 61257327 61257561 -138372589 + L1ME4a LINE L1 5824 6121 0 1731 148 12 70 chr5 61257780 61257933 -138372217 + AluJo SINE Alu 1 126 -186 1945 126 28 3 chr5 61257933 61258219 -138371931 + AluSx SINE Alu 5 297 -15 1731 148 12 70 chr5 61258219 61258395 -138371755 + AluJo SINE Alu 126 311 -1 280 376 45 11 chr5 61258899 61259077 -138371073 + MIR SINE MIR 20 203 -59 1971 109 0 4 chr5 61259385 61259652 -138370498 + AluY SINE Alu 40 305 -6 228 267 48 67 chr5 61260280 61260385 -138369765 - L2 LINE L2 -42 3271 3169 305 250 53 0 chr5 61260422 61260498 -138369652 + MIR SINE MIR 55 134 -74 1783 169 3 10 chr5 61260570 61260860 -138369290 + AluJo SINE Alu 1 288 -24 496 276 76 0 chr5 61260997 61261182 -138368968 + L2 LINE L2 1837 2035 -1279 1029 172 0 0 chr5 61261189 61261352 -138368798 - FRAM SINE Alu -2 174 12 637 268 105 38 chr5 61261359 61261751 -138368399 + L2 LINE L2 2043 2460 -854 2083 77 19 4 chr5 61261751 61262011 -138368139 - AluY SINE Alu -47 264 1 693 92 82 0 chr5 61263787 61263885 -138366265 - AluSq/x SINE Alu -206 107 2 306 256 37 0 chr5 61263907 61263989 -138366161 - L1MEd LINE L1 -6033 86 2 231 175 70 35 chr5 61264755 61264812 -138365338 - L1MC/D LINE L1 -2325 5483 5425 372 216 18 102 chr5 61264826 61264872 -138365278 - L1ME LINE L1 -302 5819 5771 2162 141 0 0 chr5 61264872 61265184 -138364966 - AluSx SINE Alu 0 312 1 372 216 18 102 chr5 61265184 61265304 -138364846 - L1ME LINE L1 -350 5771 5667 21 71 0 0 chr5 61265471 61265513 -138364637 + AT_rich Low_complexity Low_complexity 1 42 0 26 0 0 0 chr5 61265909 61265935 -138364215 + AT_rich Low_complexity Low_complexity 1 26 0 533 301 32 6 chr5 61266882 61267038 -138363112 + MIR3 SINE MIR 6 165 -43 44264 46 5 1 chr5 61267310 61273436 -138356714 - L1PA4 LINE L1 -5 6150 1 589 276 61 41 chr5 61273459 61273752 -138356398 - MLT1F LTR MaLR -81 461 163 649 78 0 0 chr5 61273756 61273868 -138356282 - AluY SINE Alu 0 316 205 327 239 138 29 chr5 61273870 61274008 -138356142 - MLT1F LTR MaLR -418 172 20 264 59 0 0 chr5 61274712 61274746 -138355404 + (CA)n Simple_repeat Simple_repeat 2 35 0 432 0 0 0 chr5 61275116 61275164 -138354986 + (CA)n Simple_repeat Simple_repeat 1 48 0 360 0 0 0 chr5 61275410 61275450 -138354700 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 6492 46 0 1 chr5 61275450 61276226 -138353924 - L1PA6 LINE L1 -16 6138 5364 335 246 147 40 chr5 61276404 61276426 -138353724 - L1MC4a LINE L1 -1634 6174 6156 1626 190 21 3 chr5 61276426 61276716 -138353434 + AluJo SINE Alu 6 300 -12 335 246 147 40 chr5 61276716 61276917 -138353233 - L1MC4a LINE L1 -1652 6156 5927 28 0 7 0 chr5 61277808 61277872 -138352278 + AT_rich Low_complexity Low_complexity 1 28 0 240 219 55 0 chr5 61277877 61277950 -138352200 - L1ME4a LINE L1 -1 6120 6044 1662 147 35 0 chr5 61278293 61278552 -138351598 - AluJb SINE Alu -44 268 1 933 242 100 11 chr5 61278608 61278889 -138351261 - L1MEc LINE L1 -6057 339 34 449 273 82 55 chr5 61278902 61279085 -138351065 - MER5A DNA MER1_type -1 188 1 1658 230 191 0 chr5 61280203 61280669 -138349481 - MLT1H1 LTR MaLR 0 555 1 305 361 8 0 chr5 61280669 61280802 -138349348 - MER5A DNA MER1_type -53 136 3 960 207 40 15 chr5 61281294 61281492 -138348658 - MLT1B LTR MaLR 0 390 188 667 178 0 16 chr5 61281495 61281746 -138348404 + (CA)n Simple_repeat Simple_repeat 1 246 0 735 185 53 20 chr5 61281766 61281917 -138348233 - MLT1B LTR MaLR -215 159 4 204 268 254 0 chr5 61283040 61283111 -138347039 - MER91A DNA MER1_type -18 178 90 323 291 88 34 chr5 61283121 61283269 -138346881 - MER91A DNA MER1_type -40 156 1 398 256 99 0 chr5 61284005 61284126 -138346024 - L2 LINE L2 -16 3297 3165 228 67 0 0 chr5 61284234 61284264 -138345886 + (TC)n Simple_repeat Simple_repeat 2 31 0 342 0 0 0 chr5 61284264 61284302 -138345848 + (CA)n Simple_repeat Simple_repeat 1 38 0 472 291 110 64 chr5 61284508 61285006 -138345144 - L1ME3 LINE L1 -322 5840 5320 314 169 31 0 chr5 61285007 61285072 -138345078 - L2 LINE L2 -702 2612 2546 2306 118 38 54 chr5 61285085 61285509 -138344641 - MSTB1 LTR MaLR -15 417 1 642 300 51 4 chr5 61285512 61285785 -138344365 - L2 LINE L2 -795 2519 2234 431 217 62 39 chr5 61285786 61285915 -138344235 - LTR33 LTR ERVL 0 521 390 954 194 0 0 chr5 61285999 61286169 -138343981 + FRAM SINE Alu 1 167 -9 2674 247 74 36 chr5 61286439 61287322 -138342828 - L2 LINE L2 -1093 2221 1306 556 205 16 0 chr5 61287336 61287458 -138342692 - Charlie2 DNA MER1_type -11 2851 2728 463 202 44 132 chr5 61287455 61287727 -138342423 - Charlie2 DNA MER1_type -759 2103 1856 * 578 290 163 20 chr5 61287731 61287983 -138342167 - Charlie2 DNA MER1_type -2459 323 36 2735 165 82 9 chr5 61287984 61288354 -138341796 - L1MB3 LINE L1 0 6183 5760 378 0 0 0 chr5 61288354 61288396 -138341754 + (TG)n Simple_repeat Simple_repeat 1 42 0 2735 165 82 9 chr5 61288396 61288565 -138341585 - L1MB3 LINE L1 -423 5760 5605 989 309 9 19 chr5 61288581 61288898 -138341252 - L2 LINE L2 -1993 1321 1008 864 312 40 38 chr5 61288995 61289426 -138340724 - L1M4 LINE L1 -1785 4361 3927 2027 139 31 67 chr5 61289426 61289815 -138340335 - THE1C LTR MaLR 0 375 1 864 312 40 38 chr5 61289815 61289983 -138340167 - L1M4 LINE L1 -2219 3927 3761 436 296 54 8 chr5 61289990 61290162 -138339988 - MIR SINE MIR -17 191 3 2105 226 64 70 chr5 61291521 61292176 -138337974 + MLT1E1 LTR MaLR 1 651 -3 1286 204 15 37 chr5 61292399 61292669 -138337481 + Tigger7 DNA MER2_type 1 264 -2223 329 122 20 0 chr5 61292676 61292725 -138337425 + Tigger7 DNA MER2_type 2504 2553 -34 734 279 111 8 chr5 61292774 61293036 -138337114 + MLT1I LTR MaLR 115 403 -6 2305 224 110 17 chr5 61296979 61297440 -138332710 + MLT1E1 LTR MaLR 1 531 -123 2233 101 3 16 chr5 61297440 61297747 -138332403 + AluY SINE Alu 1 303 -8 2305 224 110 17 chr5 61297747 61297878 -138332272 + MLT1E1 LTR MaLR 531 648 -6 185 324 0 27 chr5 61297887 61297961 -138332189 + L2 LINE L2 2417 2488 -826 260 321 10 129 chr5 61298051 61298260 -138331890 - L2 LINE L2 -52 3220 3037 716 290 133 52 chr5 61298835 61299256 -138330894 + LTR16A1 LTR ERVL 2 456 -1 2083 118 10 3 chr5 61301872 61302178 -138327972 - AluSg SINE Alu -2 308 1 471 287 189 16 chr5 61302185 61302605 -138327545 + L1M4 LINE L1 125 1225 -1103 369 313 110 46 chr5 61302671 61302865 -138327285 + HAL1b LINE L1 415 595 -753 2324 146 0 15 chr5 61302865 61303207 -138326943 + MER1B DNA MER1_type 1 337 0 369 313 110 46 chr5 61303207 61303402 -138326748 + HAL1b LINE L1 595 829 -519 864 280 105 32 chr5 61303558 61304093 -138326057 - L2 LINE L2 -666 2648 2075 380 248 65 33 chr5 61304463 61304522 -138325628 + LTR16C LTR ERVL 326 382 -109 2461 135 22 19 chr5 61304522 61304885 -138325265 + THE1B LTR MaLR 1 364 0 12769 80 14 0 chr5 61304885 61306444 -138323706 + THE1B-int LTR MaLR 1 1580 0 2402 133 25 19 chr5 61306444 61306806 -138323344 + THE1B LTR MaLR 1 364 0 380 248 65 33 chr5 61306806 61306897 -138323253 + LTR16C LTR ERVL 381 483 -8 1023 164 24 24 chr5 61307016 61307224 -138322926 - SVA Other Other -710 676 469 799 255 119 113 chr5 61307234 61307556 -138322594 - L2 LINE L2 -1309 2005 1686 7096 62 20 0 chr5 61307556 61308511 -138321639 - L1PA6 LINE L1 0 6154 5203 799 255 119 113 chr5 61308511 61308894 -138321256 - L2 LINE L2 -1628 1686 1296 2262 173 36 63 chr5 61308904 61309348 -138320802 - MSTB1 LTR MaLR 0 432 1 25155 166 31 22 chr5 61311091 61317431 -138312719 + L1PA10 LINE L1 10 6464 -15 210 105 0 0 chr5 61317431 61317469 -138312681 + (TTAAA)n Simple_repeat Simple_repeat 3 40 0 705 275 83 42 chr5 61317718 61318151 -138311999 - HAL1 LINE L1 0 2507 2057 24 32 0 0 chr5 61318236 61318267 -138311883 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr5 61318385 61318405 -138311745 + (T)n Simple_repeat Simple_repeat 1 20 0 264 86 0 0 chr5 61318421 61318456 -138311694 - Alu SINE Alu -264 35 1 3128 126 19 19 chr5 61318556 61318682 -138311468 + L1PB2 LINE L1 5658 5783 -368 2082 120 10 7 chr5 61318682 61318982 -138311168 + AluSx SINE Alu 1 301 -11 3128 126 19 19 chr5 61318982 61319341 -138310809 + L1PB2 LINE L1 5782 6143 -8 3141 256 134 43 chr5 61319807 61321463 -138308687 - HAL1 LINE L1 -449 2058 83 226 154 0 0 chr5 61321495 61321534 -138308616 - L2 LINE L2 -8 3305 3267 202 197 33 82 chr5 61321990 61322051 -138308099 - L2 LINE L2 -1 3271 3214 434 235 50 181 chr5 61322077 61322315 -138307835 + MIR SINE MIR 32 238 -24 337 341 11 10 chr5 61322344 61322472 -138307678 - MIR SINE MIR -36 172 43 2059 132 190 11 chr5 61322654 61323017 -138307133 - MSTA LTR MaLR 0 428 1 9544 130 20 50 chr5 61323017 61323692 -138306458 - MSTA-int LTR MaLR 0 1580 886 1982 128 88 23 chr5 61323692 61324044 -138306106 - THE1C LTR MaLR 0 375 1 9544 130 20 50 chr5 61324044 61324995 -138305155 - MSTA-int LTR MaLR -694 886 3 2009 163 132 23 chr5 61324997 61325383 -138304767 - MSTA LTR MaLR 0 428 1 640 239 0 0 chr5 61325570 61325712 -138304438 + L1MC4 LINE L1 6461 6602 -1440 1300 223 157 19 chr5 61325713 61326126 -138304024 + L1ME3A LINE L1 3465 3934 -2212 226 226 113 0 chr5 61326383 61326445 -138303705 - MER103 DNA DNA -45 121 53 744 242 65 2 chr5 61328421 61328714 -138301436 + L1ME3A LINE L1 5638 5959 -203 2176 120 17 0 chr5 61328795 61329094 -138301056 + AluSx SINE Alu 1 304 -8 489 34 0 0 chr5 61329375 61329434 -138300716 + (CA)n Simple_repeat Simple_repeat 2 60 0 679 192 0 8 chr5 61330316 61330441 -138299709 + FLAM_C SINE Alu 1 124 -9 644 246 23 6 chr5 61332736 61332911 -138297239 - MER5B DNA MER1_type 0 178 1 233 240 126 114 chr5 61334371 61334642 -138295508 + L2 LINE L2 2325 2598 -716 224 374 78 35 chr5 61334735 61334965 -138295185 + L2 LINE L2 2926 3165 -107 642 240 34 17 chr5 61335021 61335196 -138294954 + MER5B DNA MER1_type 1 178 0 911 240 142 32 chr5 61335287 61335802 -138294348 - MLT1F1 LTR MaLR 0 567 1 21 0 0 0 chr5 61335965 61335986 -138294164 + AT_rich Low_complexity Low_complexity 1 21 0 2575 209 51 17 chr5 61337237 61337901 -138292249 + L1MC4a LINE L1 6378 7064 -744 2522 291 62 15 chr5 61337945 61339080 -138291070 - HERV16 LTR ERVL -2299 3355 2166 294 234 175 62 chr5 61339307 61339598 -138290552 - HERV16 LTR ERVL -4409 587 264 972 251 95 32 chr5 61339798 61340208 -138289942 - LTR16B LTR ERVL -21 443 8 344 203 47 0 chr5 61340217 61340281 -138289869 - MIR SINE MIR -182 80 14 755 157 7 36 chr5 61340808 61340948 -138289202 - AluJb SINE Alu -176 136 1 25 0 0 0 chr5 61341379 61341404 -138288746 + AT_rich Low_complexity Low_complexity 1 25 0 952 131 0 14 chr5 61342306 61342451 -138287699 + FLAM_C SINE Alu 1 143 0 264 257 80 35 chr5 61343633 61343746 -138286404 - L2 LINE L2 -97 3216 3099 2126 70 21 97 chr5 61343955 61344285 -138285865 - AluYb8 SINE Alu -13 305 1 422 225 40 98 chr5 61344931 61345104 -138285046 + MIR SINE MIR 87 249 -13 2072 79 4 29 chr5 61345107 61345385 -138284765 - AluSp SINE Alu -15 298 28 2053 132 7 0 chr5 61345392 61345687 -138284463 - AluSq SINE Alu -16 297 1 2044 132 0 0 chr5 61345778 61346090 -138284060 + AluSx SINE Alu 3 314 0 1815 168 0 10 chr5 61346712 61347015 -138283135 + AluJb SINE Alu 3 302 -10 989 141 25 0 chr5 61347116 61347279 -138282871 + FRAM SINE Alu 1 166 -10 2276 66 16 20 chr5 61347279 61347584 -138282566 + AluSc SINE Alu 1 304 -5 2043 138 37 3 chr5 61347997 61348323 -138281827 - MER1B DNA MER1_type 0 337 1 23 33 0 0 chr5 61353710 61353740 -138276410 + AT_rich Low_complexity Low_complexity 1 30 0 306 0 0 0 chr5 61354317 61354351 -138275799 + (TG)n Simple_repeat Simple_repeat 2 35 0 2289 98 3 0 chr5 61354744 61355031 -138275119 + AluSg SINE Alu 1 288 -22 1750 144 3 50 chr5 61355448 61355629 -138274521 - AluJo SINE Alu -17 295 132 1827 95 88 53 chr5 61355629 61355913 -138274237 + AluSx SINE Alu 2 295 -17 1750 144 3 50 chr5 61355913 61356030 -138274120 - AluJo SINE Alu -180 132 11 8406 58 6 0 chr5 61356377 61358271 -138271879 + L1PA6 LINE L1 4249 6151 -3 360 0 0 0 chr5 61358294 61358334 -138271816 + (CA)n Simple_repeat Simple_repeat 1 40 0 244 213 85 0 chr5 61358340 61358387 -138271763 - L2 LINE L2 -2 3311 3261 21 71 0 0 chr5 61359661 61359703 -138270447 + AT_rich Low_complexity Low_complexity 1 42 0 245 191 29 15 chr5 61359718 61359786 -138270364 + (TA)n Simple_repeat Simple_repeat 2 70 0 2364 80 3 49 chr5 61360520 61360845 -138269305 - AluSp SINE Alu -3 310 1 24 0 0 0 chr5 61361899 61361923 -138268227 + AT_rich Low_complexity Low_complexity 1 24 0 2172 128 0 7 chr5 61362110 61362415 -138267735 + AluSx SINE Alu 1 303 -9 321 250 76 76 chr5 61362719 61362891 -138267259 - L1ME4a LINE L1 -274 5847 5676 459 237 46 53 chr5 61362900 61363031 -138267119 + MIR SINE MIR 50 179 -83 2192 113 3 0 chr5 61363072 61363363 -138266787 + AluSx SINE Alu 1 292 -20 656 286 23 0 chr5 61363607 61363778 -138266372 + MIR SINE MIR 11 185 -77 1210 279 135 40 chr5 61363942 61364544 -138265606 + L1MEc LINE L1 53 596 -5800 811 195 130 0 chr5 61364544 61364729 -138265421 - MER3 DNA MER1_type 0 209 1 1210 279 135 40 chr5 61364729 61364768 -138265382 + L1MEc LINE L1 596 630 -5766 1940 117 0 79 chr5 61364768 61365085 -138265065 + AluJb SINE Alu 1 292 -20 1210 279 135 40 chr5 61365085 61365971 -138264179 + L1MEc LINE L1 630 1796 -4600 819 174 237 0 chr5 61366693 61366883 -138263267 - MER46A DNA MER2_type -1 235 1 441 0 0 0 chr5 61368332 61368381 -138261769 + (CA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr5 61368540 61368562 -138261588 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 61368730 61368760 -138261390 + AT_rich Low_complexity Low_complexity 1 30 0 37 0 0 0 chr5 61368980 61369017 -138261133 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr5 61369205 61369227 -138260923 + AT_rich Low_complexity Low_complexity 1 22 0 190 227 68 0 chr5 61370394 61370438 -138259712 - MIR SINE MIR 0 262 216 278 87 22 0 chr5 61370631 61370677 -138259473 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 188 302 217 9 chr5 61370875 61370981 -138259169 - L2 LINE L2 -4 3309 3182 25 31 0 0 chr5 61370987 61371019 -138259131 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr5 61371076 61371101 -138259049 + AT_rich Low_complexity Low_complexity 1 25 0 2288 85 7 0 chr5 61371101 61371395 -138258755 - AluSp SINE Alu -17 296 1 573 306 18 72 chr5 61371584 61371692 -138258458 - L2 LINE L2 -485 2829 2717 866 147 57 0 chr5 61371692 61371869 -138258281 - MER53 DNA DNA -1 188 2 573 306 18 72 chr5 61371869 61372038 -138258112 - L2 LINE L2 -597 2717 2567 1285 228 16 22 chr5 61372154 61372474 -138257676 - LTR27 LTR ERV1 -20 616 299 926 147 11 17 chr5 61372541 61372718 -138257432 - LTR28 LTR ERV1 -844 176 1 202 354 0 0 chr5 61372742 61372807 -138257343 - L2 LINE L2 -940 2374 2310 597 311 84 16 chr5 61372822 61372899 -138257251 + L2 LINE L2 2084 2154 -1160 2202 160 85 5 chr5 61372899 61373286 -138256864 + MER47B DNA MER2_type 1 418 0 597 311 84 16 chr5 61373286 61373459 -138256691 + L2 LINE L2 2154 2351 -963 334 295 299 0 chr5 61373944 61374161 -138255989 + L2 LINE L2 2465 2746 -568 795 315 117 20 chr5 61374193 61374596 -138255554 + LTR16A LTR ERVL 1 442 -8 781 295 148 25 chr5 61374596 61375056 -138255094 + L2 LINE L2 2799 3313 0 326 312 113 28 chr5 61375040 61375287 -138254863 - L2 LINE L2 -1010 2304 2037 * 899 286 72 19 chr5 61375438 61375756 -138254394 + LTR16C LTR ERVL 149 483 -8 248 316 126 6 chr5 61375766 61375940 -138254210 - L2 LINE L2 -1293 2021 1827 333 0 0 0 chr5 61376299 61376336 -138253814 + (TA)n Simple_repeat Simple_repeat 1 37 0 369 209 70 16 chr5 61376520 61376649 -138253501 - L1MC5 LINE L1 -496 7465 7330 847 177 73 6 chr5 61376649 61376813 -138253337 - MER5A DNA MER1_type 0 189 15 1118 186 47 78 chr5 61376814 61377263 -138252887 - L1MC5 LINE L1 -891 6917 6542 26 0 0 0 chr5 61377303 61377329 -138252821 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 61377466 61377487 -138252663 + AT_rich Low_complexity Low_complexity 1 21 0 2436 74 0 10 chr5 61377628 61377937 -138252213 - AluY SINE Alu -4 307 2 598 277 125 31 chr5 61377949 61378448 -138251702 - L1MC4a LINE L1 -1644 6164 5597 391 261 8 67 chr5 61378456 61378575 -138251575 + L2 LINE L2 3202 3313 0 504 243 71 7 chr5 61380058 61380198 -138249952 - L2 LINE L2 -3 3310 3162 371 246 131 70 chr5 61380399 61380874 -138249276 - L1ME4a LINE L1 -3 6118 5615 858 128 89 149 chr5 61380916 61381151 -138248999 + AluJo SINE Alu 85 305 -7 272 273 218 9 chr5 61381483 61381593 -138248557 + L2 LINE L2 3136 3268 -4 17631 45 5 8 chr5 61382538 61385555 -138244595 - L1PA5 LINE L1 -1 6153 3139 1604 171 61 17 chr5 61387198 61387542 -138242608 + THE1C LTR MaLR 14 372 -3 662 198 88 26 chr5 61387595 61387787 -138242363 + MER3 DNA MER1_type 6 209 0 22 35 0 0 chr5 61387850 61387879 -138242271 + AT_rich Low_complexity Low_complexity 1 29 0 312 201 134 47 chr5 61388252 61388401 -138241749 - L1ME4a LINE L1 -3 6118 5957 1484 158 178 10 chr5 61388775 61389073 -138241077 + MER7A DNA MER2_type 1 346 0 347 327 13 26 chr5 61389150 61389303 -138240847 - LTR16C LTR ERVL -69 422 272 1811 151 79 69 chr5 61390059 61390211 -138239939 - MLT2D LTR ERVL 0 414 265 2093 136 16 3 chr5 61390211 61390519 -138239631 + AluSx SINE Alu 1 312 0 1811 151 79 69 chr5 61390519 61390770 -138239380 - MLT2D LTR ERVL -149 265 7 381 295 53 48 chr5 61390773 61391000 -138239150 + MER112 DNA MER1_type 33 260 0 32 57 0 0 chr5 61392417 61392470 -138237680 + AT_rich Low_complexity Low_complexity 1 53 0 333 172 269 0 chr5 61393592 61393685 -138236465 - Charlie2a DNA MER1_type -37 2825 2708 1115 148 10 5 chr5 61393686 61393882 -138236268 - Charlie2a DNA MER1_type -1199 1663 1467 588 202 9 0 chr5 61393983 61394097 -138236053 - Charlie2b DNA MER1_type -2112 670 556 * 1061 261 39 23 chr5 61394096 61394402 -138235748 - Charlie2b DNA MER1_type -2551 311 1 872 242 11 0 chr5 61394428 61394610 -138235540 + MER58A DNA MER1_type 33 216 -8 1796 172 0 7 chr5 61394686 61394977 -138235173 + AluJo SINE Alu 1 289 -23 385 235 355 19 chr5 61395160 61395526 -138234624 - HAL1 LINE L1 -162 2345 1857 744 231 158 14 chr5 61395564 61395785 -138234365 - HAL1 LINE L1 -742 1765 1513 533 249 180 22 chr5 61395782 61396099 -138234051 - HAL1 LINE L1 -1299 1208 842 * 743 312 53 14 chr5 61396174 61396459 -138233691 - HAL1 LINE L1 -1808 699 404 566 234 186 69 chr5 61396505 61396796 -138233354 - L1MC4 LINE L1 -267 7775 7451 * 687 127 34 8 chr5 61396792 61396910 -138233240 + L1MA3 LINE L1 12 132 -7433 * 13906 172 27 30 chr5 61396908 61398536 -138231614 + L1MA3 LINE L1 1099 2730 -4994 2718 100 11 0 chr5 61398536 61398907 -138231243 - THE1C LTR MaLR 0 375 1 13906 172 27 30 chr5 61398907 61399830 -138230320 + L1MA3 LINE L1 2730 3654 -4070 2224 110 0 0 chr5 61399830 61400122 -138230028 + AluSc SINE Alu 1 292 -17 13906 172 27 30 chr5 61400122 61400288 -138229862 + L1MA3 LINE L1 3654 3819 -3905 1582 152 7 42 chr5 61400288 61400424 -138229726 + AluJb SINE Alu 4 126 -186 2393 93 0 0 chr5 61400424 61400735 -138229415 + AluY SINE Alu 1 311 0 1582 152 7 42 chr5 61400735 61400881 -138229269 + AluJb SINE Alu 126 276 -36 230 0 33 0 chr5 61400886 61400916 -138229234 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 13906 172 27 30 chr5 61400916 61402412 -138227738 + L1MA3 LINE L1 3823 5322 -2402 1888 143 55 30 chr5 61402412 61402775 -138227375 - THE1C LTR MaLR 0 375 4 13906 172 27 30 chr5 61402775 61403872 -138226278 + L1MA3 LINE L1 5322 6421 -1303 6493 10 0 43 chr5 61403872 61404687 -138225463 + L1PA3 LINE L1 5382 6166 0 13906 172 27 30 chr5 61404687 61405250 -138224900 + L1MA3 LINE L1 6421 6984 -740 405 0 0 0 chr5 61405250 61405295 -138224855 + (TG)n Simple_repeat Simple_repeat 2 46 0 13906 172 27 30 chr5 61405295 61405941 -138224209 + L1MA3 LINE L1 6984 7724 0 1025 275 71 9 chr5 61405948 61406272 -138223878 - L1MC4 LINE L1 -576 7466 7123 * 1217 267 47 6 chr5 61406271 61406631 -138223519 - HAL1 LINE L1 -2132 375 1 299 250 30 68 chr5 61406639 61406771 -138223379 - L1ME3A LINE L1 -224 5946 5820 2470 114 3 8 chr5 61408184 61408551 -138221599 - MER47A DNA MER2_type 0 366 2 204 135 0 0 chr5 61409072 61409109 -138221041 + (AGTAG)n Simple_repeat Simple_repeat 1 37 0 2494 246 81 19 chr5 61409254 61410238 -138219912 - L1ME3A LINE L1 -532 5632 4563 903 232 0 5 chr5 61410238 61410428 -138219722 + MER5A DNA MER1_type 1 189 0 2494 246 81 19 chr5 61410428 61410628 -138219522 - L1ME3A LINE L1 -1601 4563 4377 479 262 45 30 chr5 61410724 61410926 -138219224 + L1MC5 LINE L1 7323 7527 -434 216 0 0 0 chr5 61411781 61411805 -138218345 + (TG)n Simple_repeat Simple_repeat 2 25 0 50 18 0 0 chr5 61412663 61412720 -138217430 + AT_rich Low_complexity Low_complexity 1 57 0 227 211 0 86 chr5 61413045 61413197 -138216953 + T-rich Low_complexity Low_complexity 2 140 0 613 271 96 10 chr5 61413404 61413603 -138216547 - L2 LINE L2 -1 3312 3097 968 236 46 35 chr5 61413998 61414257 -138215893 + MIR SINE MIR 1 262 0 479 258 76 8 chr5 61414632 61414764 -138215386 - MIR SINE MIR -109 153 13 1773 134 147 3 chr5 61414820 61415140 -138215010 + MER47A DNA MER2_type 1 366 0 2028 146 7 0 chr5 61415359 61415660 -138214490 - AluSx SINE Alu -9 303 1 2377 87 0 0 chr5 61415723 61416023 -138214127 - AluSc SINE Alu -9 300 1 7397 190 8 6 chr5 61416343 61417644 -138212506 + L1PA13 LINE L1 7 1310 -6271 3249 164 5 10 chr5 61417655 61418241 -138211909 + L1PA13 LINE L1 2379 2961 -4613 * 4407 153 17 5 chr5 61418228 61418992 -138211158 + L1PA13 LINE L1 4729 5501 -2083 1959 178 37 32 chr5 61418992 61419539 -138210611 + MLT2A1 LTR ERVL 1 554 0 6909 158 25 5 chr5 61419539 61420163 -138209987 + L1PA13 LINE L1 5497 6107 -1494 207 24 49 24 chr5 61420163 61420204 -138209946 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 6909 158 25 5 chr5 61420204 61421651 -138208499 + L1PA13 LINE L1 6107 7590 -11 1251 186 28 41 chr5 61421837 61422128 -138208022 + MER58B DNA MER1_type 55 341 0 23 54 0 0 chr5 61422195 61422232 -138207918 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 61422962 61422983 -138207167 + AT_rich Low_complexity Low_complexity 1 21 0 570 225 40 50 chr5 61423728 61423928 -138206222 - L1ME1 LINE L1 -5 6230 6033 2079 262 52 18 chr5 61423928 61424481 -138205669 + MLT1E LTR MaLR 13 584 -9 4490 239 83 23 chr5 61424496 61424950 -138205200 - L1ME1 LINE L1 -334 5901 5476 1473 187 10 91 chr5 61424950 61425357 -138204793 - MLT1A2 LTR MaLR 0 374 1 4490 239 83 23 chr5 61425357 61426193 -138203957 - L1ME1 LINE L1 -759 5476 4692 1583 206 0 19 chr5 61426193 61426509 -138203641 - AluJo SINE Alu -2 310 1 4490 239 83 23 chr5 61426509 61427338 -138202812 - L1ME1 LINE L1 -1543 4692 3655 398 217 43 11 chr5 61427333 61427425 -138202725 - L1ME1 LINE L1 -3417 2798 2704 * 260 250 50 0 chr5 61427458 61427538 -138202612 - L1ME1 LINE L1 -4089 2307 2224 2987 136 6 14 chr5 61427538 61428046 -138202104 + L1MB3 LINE L1 5677 6180 -3 1877 242 57 13 chr5 61428065 61428665 -138201485 + L1ME1 LINE L1 3840 4465 -1681 1311 119 12 96 chr5 61428665 61428916 -138201234 + AluSx SINE Alu 1 230 -82 794 188 0 0 chr5 61428919 61429079 -138201071 + L1PA16 LINE L1 4873 5032 -1114 * 4625 121 20 7 chr5 61429076 61429925 -138200225 + L1PA16 LINE L1 5255 6166 0 722 179 0 8 chr5 61429949 61430072 -138200078 + FLAM_A SINE Alu 5 126 -7 1904 224 90 42 chr5 61430167 61430946 -138199204 - Charlie7 DNA MER1_type -1310 1302 413 376 108 31 0 chr5 61430965 61431030 -138199120 - L1MA10 LINE L1 0 6334 6268 2104 198 67 88 chr5 61431039 61432279 -138197871 + L1ME1 LINE L1 4666 5881 -285 820 290 46 23 chr5 61432313 61432620 -138197530 + L1MEc LINE L1 102 415 -5981 536 212 99 13 chr5 61432618 61432769 -138197381 + L1M4 LINE L1 3975 4138 -2008 * 240 298 99 50 chr5 61432832 61432993 -138197157 - MIR3 SINE MIR -3 205 37 1810 169 3 3 chr5 61433585 61433880 -138196270 - AluSx SINE Alu -14 298 4 406 322 74 20 chr5 61434027 61434229 -138195921 - L2 LINE L2 0 3313 3101 183 243 122 27 chr5 61434383 61434457 -138195693 + MIR SINE MIR 34 114 -148 4664 250 118 15 chr5 61434471 61435968 -138194182 + L2 LINE L2 1418 3095 -218 2284 70 3 13 chr5 61435968 61436270 -138193880 + AluY SINE Alu 1 299 -12 4664 250 118 15 chr5 61436270 61436409 -138193741 + L2 LINE L2 3095 3218 -95 260 308 15 0 chr5 61437168 61437233 -138192917 + MIR SINE MIR 79 144 -118 1650 136 90 37 chr5 61437233 61437556 -138192594 + THE1C LTR MaLR 1 340 -35 2154 93 0 17 chr5 61437556 61437731 -138192419 - AluSq SINE Alu 0 308 139 2381 82 0 10 chr5 61437731 61438035 -138192115 - AluSc SINE Alu -8 301 1 2154 93 0 17 chr5 61438035 61438172 -138191978 - AluSq SINE Alu -169 139 1 248 183 43 140 chr5 61438178 61438271 -138191879 - L2 LINE L2 -8 3305 3222 214 322 100 0 chr5 61438710 61438800 -138191350 - MIR SINE MIR -111 151 53 441 238 99 0 chr5 61438800 61438901 -138191249 + MER96 DNA MER1_type? 65 175 0 1968 110 3 21 chr5 61439440 61439762 -138190388 + AluSx SINE Alu 1 317 0 21 0 0 0 chr5 61439819 61439840 -138190310 + AT_rich Low_complexity Low_complexity 1 21 0 372 77 0 0 chr5 61441696 61441748 -138188402 + (TG)n Simple_repeat Simple_repeat 1 52 0 180 111 0 0 chr5 61442537 61442564 -138187586 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 297 232 116 0 chr5 61442708 61442803 -138187347 + MER113 DNA MER1_type? 9 114 -407 518 251 89 108 chr5 61443217 61443476 -138186674 - MIR SINE MIR -7 255 2 287 224 86 59 chr5 61443682 61443834 -138186316 - L1ME4a LINE L1 -30 6091 5936 346 108 36 36 chr5 61444223 61444306 -138185844 + Charlie1 DNA MER1_type 2561 2643 -118 879 233 88 26 chr5 61444325 61444361 -138185789 - L1MA9 LINE L1 -38 6274 6242 6509 50 6 2 chr5 61444361 61445182 -138184968 + L1PA4 LINE L1 5331 6154 -1 879 233 88 26 chr5 61445182 61445450 -138184700 - L1MA9 LINE L1 -70 6242 5951 1167 193 97 15 chr5 61445453 61445722 -138184428 - MER2 DNA MER2_type 0 345 55 11504 226 39 32 chr5 61445735 61448826 -138181324 - L1 LINE L1 -1280 5887 3042 1373 171 43 60 chr5 61448826 61449125 -138181025 - AluJo SINE Alu -18 294 1 11504 226 39 32 chr5 61449125 61450805 -138179345 - L1 LINE L1 -4125 3042 1375 324 194 136 0 chr5 61450805 61450908 -138179242 + Charlie1 DNA MER1_type 2640 2756 -5 316 306 61 14 chr5 61450967 61451114 -138179036 + L1MC4 LINE L1 7068 7221 -821 509 294 14 27 chr5 61451821 61451967 -138178183 - Tigger8 DNA MER2_type -499 167 24 403 269 198 35 chr5 61452138 61452335 -138177815 - MIR SINE MIR -14 248 20 21 0 0 0 chr5 61453911 61453932 -138176218 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 61454317 61454348 -138175802 + AT_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr5 61454378 61454404 -138175746 + AT_rich Low_complexity Low_complexity 1 26 0 327 25 0 0 chr5 61455382 61455422 -138174728 + (TA)n Simple_repeat Simple_repeat 2 41 0 2271 105 0 3 chr5 61455423 61455736 -138174414 - AluSx SINE Alu 0 312 1 187 269 315 0 chr5 61456370 61456478 -138173672 - MIR SINE MIR -11 251 110 340 133 67 33 chr5 61458055 61458115 -138172035 + L1MB2 LINE L1 6076 6141 -30 1479 182 8 0 chr5 61458115 61458373 -138171777 - AluJo SINE Alu -4 308 49 340 133 67 33 chr5 61458373 61458402 -138171748 + L1MB2 LINE L1 6141 6168 -3 992 270 75 44 chr5 61458602 61458987 -138171163 + MLT1K LTR MaLR 69 465 -123 983 263 57 39 chr5 61459020 61459458 -138170692 - MLT1J1 LTR MaLR 0 446 1 2451 65 0 0 chr5 61459733 61460039 -138170111 + AluY SINE Alu 2 307 -4 21 36 0 0 chr5 61461769 61461797 -138168353 + AT_rich Low_complexity Low_complexity 1 28 0 1538 120 13 70 chr5 61462044 61462344 -138167806 + L1MB2 LINE L1 5446 5728 -443 225 158 0 0 chr5 61462371 61462409 -138167741 + L1MB2 LINE L1 5722 5759 -412 279 0 0 0 chr5 61462424 61462455 -138167695 + (TG)n Simple_repeat Simple_repeat 2 32 0 2130 133 45 8 chr5 61462536 61462911 -138167239 + L1MB2 LINE L1 5783 6171 0 577 248 222 0 chr5 61464941 61465139 -138165011 + MIR SINE MIR 15 256 -6 5250 147 50 20 chr5 61465808 61466704 -138163446 + L1MA8 LINE L1 3414 4345 -1801 726 179 0 15 chr5 61466704 61466838 -138163312 + FLAM_C SINE Alu 2 133 0 5250 147 50 20 chr5 61466838 61466966 -138163184 + L1MA8 LINE L1 4345 4468 -1678 23 33 0 0 chr5 61466967 61466997 -138163153 + AT_rich Low_complexity Low_complexity 1 30 0 219 174 0 28 chr5 61466997 61467106 -138163044 + T-rich Low_complexity Low_complexity 4 109 0 244 199 0 29 chr5 61467121 61467292 -138162858 + T-rich Low_complexity Low_complexity 4 169 0 28 0 0 0 chr5 61467298 61467326 -138162824 + AT_rich Low_complexity Low_complexity 1 28 0 4534 158 48 5 chr5 61467326 61468619 -138161531 + L1MA8 LINE L1 4463 5837 -454 375 78 0 0 chr5 61468619 61468670 -138161480 + (CA)n Simple_repeat Simple_repeat 2 52 0 4534 158 48 5 chr5 61468670 61468950 -138161200 + L1MA8 LINE L1 5837 6103 -188 1863 169 35 13 chr5 61468915 61469103 -138161047 - L1MC1 LINE L1 -169 6164 5982 * 1980 146 0 0 chr5 61469103 61469404 -138160746 - AluSq SINE Alu -12 301 1 1863 169 35 13 chr5 61469404 61469588 -138160562 - L1MC1 LINE L1 -351 5982 5784 468 265 121 19 chr5 61469894 61470109 -138160041 - L1MC4a LINE L1 -1836 5972 5736 22 0 0 0 chr5 61470109 61470131 -138160019 + AT_rich Low_complexity Low_complexity 1 22 0 1375 193 183 18 chr5 61471825 61472054 -138158096 - MLT1C LTR MaLR -4 463 273 324 0 0 0 chr5 61472054 61472090 -138158060 + (TG)n Simple_repeat Simple_repeat 2 37 0 1375 193 183 18 chr5 61472090 61472253 -138157897 - MLT1C LTR MaLR -194 273 6 354 45 0 0 chr5 61474211 61474255 -138155895 + (TC)n Simple_repeat Simple_repeat 2 45 0 232 316 146 40 chr5 61474306 61474559 -138155591 + L2 LINE L2 2479 2758 -556 351 269 56 9 chr5 61474697 61474805 -138155345 + MER103 DNA DNA 53 165 -1 649 282 44 41 chr5 61475367 61475832 -138154318 + LTR33 LTR ERVL 16 521 0 183 286 60 48 chr5 61475957 61476041 -138154109 + L2 LINE L2 3150 3234 -38 642 210 24 18 chr5 61476108 61476275 -138153875 + MLT1J2 LTR MaLR 54 221 -229 27 49 0 0 chr5 61476528 61476569 -138153581 + AT_rich Low_complexity Low_complexity 1 41 0 261 0 0 0 chr5 61476891 61476920 -138153230 + (A)n Simple_repeat Simple_repeat 1 29 0 2203 112 3 0 chr5 61476979 61477275 -138152875 + AluSx SINE Alu 1 297 -15 297 0 0 0 chr5 61477402 61477435 -138152715 + (CA)n Simple_repeat Simple_repeat 2 34 0 1465 145 204 0 chr5 61477787 61478076 -138152074 + MER7A DNA MER2_type 1 346 0 1821 86 0 0 chr5 61479109 61479364 -138150786 + L1PA7 LINE L1 4320 4574 -1572 1181 102 5 21 chr5 61479338 61479525 -138150625 + L1P3 LINE L1 5461 5644 -510 * 6605 57 10 47 chr5 61479517 61481183 -138148967 + L1PA7 LINE L1 4551 6154 0 702 142 90 0 chr5 61483047 61483181 -138146969 - L1MC1 LINE L1 0 6333 6188 975 298 50 16 chr5 61483474 61483916 -138146234 + L1MC4a LINE L1 5479 5583 -708 726 316 59 40 chr5 61484136 61484459 -138145691 + L2 LINE L2 2985 3313 0 30 45 0 0 chr5 61485260 61485304 -138144846 + AT_rich Low_complexity Low_complexity 1 44 0 21 57 0 0 chr5 61485635 61485670 -138144480 + AT_rich Low_complexity Low_complexity 1 35 0 395 323 83 83 chr5 61487073 61487507 -138142643 - L2 LINE L2 -4 3268 2835 35 54 0 0 chr5 61487514 61487570 -138142580 + AT_rich Low_complexity Low_complexity 1 56 0 598 276 65 6 chr5 61487652 61487822 -138142328 + MIR SINE MIR 5 184 -78 210 71 0 0 chr5 61487847 61487875 -138142275 + (TTA)n Simple_repeat Simple_repeat 2 29 0 193 333 0 0 chr5 61487989 61488034 -138142116 - L2 LINE L2 -5 3267 3223 748 304 90 73 chr5 61488241 61489299 -138140851 + L1MEd LINE L1 46 1219 -4900 2260 94 0 0 chr5 61489401 61489687 -138140463 + AluSx SINE Alu 1 286 -26 438 284 58 39 chr5 61489722 61489979 -138140171 + HAL1 LINE L1 1413 1674 -833 1688 191 76 25 chr5 61490144 61490537 -138139613 + MLT2D LTR ERVL 2 414 0 2724 176 18 8 chr5 61490752 61491245 -138138905 + MLT1D LTR MaLR 7 504 -1 2115 94 7 27 chr5 61491352 61491649 -138138501 + AluSg SINE Alu 1 291 -19 580 167 0 0 chr5 61491654 61491750 -138138400 + FLAM_A SINE Alu 25 120 -22 243 0 0 0 chr5 61491771 61491798 -138138352 + (CA)n Simple_repeat Simple_repeat 2 28 0 233 290 56 23 chr5 61491809 61492023 -138138127 + L1MEd LINE L1 2853 3073 -3056 723 301 42 16 chr5 61492224 61492610 -138137540 + L1MEd LINE L1 3323 3718 -2411 351 271 15 30 chr5 61492629 61492762 -138137388 - L1MEd LINE L1 -5978 141 11 21 36 0 0 chr5 61492830 61492858 -138137292 + AT_rich Low_complexity Low_complexity 1 28 0 205 316 26 0 chr5 61492904 61492980 -138137170 + GA-rich Low_complexity Low_complexity 5 82 0 532 246 22 7 chr5 61492984 61493122 -138137028 - MIR SINE MIR 0 262 123 278 350 15 29 chr5 61493243 61493380 -138136770 - MIR3 SINE MIR -36 172 38 2158 183 75 43 chr5 61493881 61494298 -138135852 + MER63 DNA MER1_type 508 910 -150 2127 117 0 7 chr5 61494298 61494588 -138135562 + AluSx SINE Alu 5 292 -20 2158 183 75 43 chr5 61494588 61494607 -138135543 + MER63 DNA MER1_type 910 927 -133 457 246 0 49 chr5 61494607 61494729 -138135421 - FLAM_A SINE Alu -17 116 1 2158 183 75 43 chr5 61494729 61494827 -138135323 + MER63 DNA MER1_type 927 1060 0 392 218 26 0 chr5 61495326 61495404 -138134746 - MER2 DNA MER2_type -264 81 2 2229 100 0 3 chr5 61496153 61496442 -138133708 - AluSc SINE Alu -21 288 1 2230 108 0 7 chr5 61496767 61497063 -138133087 + AluSx SINE Alu 1 294 -18 3201 214 40 53 chr5 61497589 61498404 -138131746 - MER21B LTR ERV1 -58 805 1 30 59 0 0 chr5 61499585 61499636 -138130514 + AT_rich Low_complexity Low_complexity 1 51 0 506 296 22 65 chr5 61499962 61500192 -138129958 - L2 LINE L2 -937 2377 2158 189 0 0 0 chr5 61500235 61500256 -138129894 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 243 352 69 6 chr5 61500273 61500432 -138129718 - L2 LINE L2 -1318 1996 1828 21 0 0 0 chr5 61500455 61500476 -138129674 + AT_rich Low_complexity Low_complexity 1 21 0 267 228 114 163 chr5 61500479 61500602 -138129548 - L2 LINE L2 -16 3256 3140 764 304 50 71 chr5 61500614 61501095 -138129055 - LTR67 LTR ERVL -2 555 85 1397 249 54 52 chr5 61501220 61501682 -138128468 - MLT1J LTR MaLR -48 463 1 544 343 89 42 chr5 61501957 61502452 -138127698 - L2 LINE L2 -421 2893 2376 436 250 0 32 chr5 61503001 61503125 -138127025 - MER103 DNA DNA -37 129 10 326 267 112 9 chr5 61503711 61503827 -138126323 - MIR SINE MIR -48 214 87 7118 35 0 1 chr5 61504034 61504891 -138125259 - L1PA3 LINE L1 -1 6154 5299 4039 31 0 0 chr5 61504892 61505382 -138124768 + L1PA3 LINE L1 4813 5302 -844 8140 42 0 3 chr5 61505638 61507410 -138122740 + L1PA5 LINE L1 4383 6152 -2 23 33 0 0 chr5 61507410 61507440 -138122710 + AT_rich Low_complexity Low_complexity 1 30 0 1743 153 0 56 chr5 61508383 61508704 -138121446 + AluJo SINE Alu 1 303 -9 29 28 0 0 chr5 61510639 61510675 -138119475 + AT_rich Low_complexity Low_complexity 1 36 0 2716 170 60 14 chr5 61512617 61513188 -138116962 - L1MB5 LINE L1 0 6174 5578 23 33 0 0 chr5 61513887 61513917 -138116233 + AT_rich Low_complexity Low_complexity 1 30 0 9474 170 54 6 chr5 61515291 61517780 -138112370 + L1MA1 LINE L1 19 2777 -4788 7234 181 104 55 chr5 61517781 61519448 -138110702 + MER52A LTR ERV1 1 1750 -5 2190 109 35 37 chr5 61519452 61519855 -138110295 + L1MA1 LINE L1 2774 3175 -4390 * 6509 119 31 10 chr5 61519854 61521163 -138108987 + L1MA1 LINE L1 6383 7717 -4 32 26 0 0 chr5 61521163 61521202 -138108948 + AT_rich Low_complexity Low_complexity 1 39 0 201 265 54 0 chr5 61521398 61521462 -138108688 + MIR SINE MIR 89 146 -62 425 181 36 12 chr5 61521748 61521831 -138108319 + AluJo SINE Alu 50 134 -168 3215 98 51 0 chr5 61521912 61522423 -138107727 - L1MA3 LINE L1 0 6305 5769 11447 190 28 18 chr5 61522433 61525390 -138104760 - L1PA15 LINE L1 -3 7581 4579 1984 128 3 26 chr5 61525390 61525702 -138104448 - AluSq SINE Alu -8 305 1 11447 190 28 18 chr5 61525702 61526066 -138104084 - L1PA15 LINE L1 -3005 4579 4220 2244 145 27 0 chr5 61526067 61526440 -138103710 - L1MA3 LINE L1 -519 5786 5404 2249 103 5 93 chr5 61526440 61526624 -138103526 + THE1B LTR MaLR 1 133 -231 20638 37 1 3 chr5 61526624 61529953 -138100197 + L1PA4 LINE L1 2820 6154 -1 2249 103 5 93 chr5 61529953 61530167 -138099983 + THE1B LTR MaLR 133 364 0 1852 206 32 16 chr5 61530167 61530640 -138099510 - L1MA3 LINE L1 -897 5408 4746 15120 149 30 23 chr5 61530640 61531608 -138098542 - L1PA15 LINE L1 -4286 3279 2320 1613 183 0 4 chr5 61531608 61531860 -138098290 - AluSx SINE Alu -61 251 1 15120 149 30 23 chr5 61531860 61533633 -138096517 - L1PA15 LINE L1 -5245 2320 561 2524 115 59 12 chr5 61533633 61534042 -138096108 + MSTA LTR MaLR 1 428 0 15120 149 30 23 chr5 61534042 61534489 -138095661 - L1PA15 LINE L1 -7004 561 50 2189 118 7 3 chr5 61534489 61534794 -138095356 - AluSx SINE Alu -6 306 1 15120 149 30 23 chr5 61534794 61534845 -138095305 - L1PA15 LINE L1 -7515 50 1 1640 197 24 3 chr5 61534911 61535200 -138094950 - AluJo SINE Alu -13 299 5 32 0 0 0 chr5 61535228 61535260 -138094890 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 61536117 61536139 -138094011 + AT_rich Low_complexity Low_complexity 1 22 0 1895 232 32 76 chr5 61536412 61537059 -138093091 + L2 LINE L2 1867 2485 -829 1957 145 25 0 chr5 61537241 61537556 -138092594 + AluSx SINE Alu 1 322 0 717 125 9 0 chr5 61537698 61537810 -138092340 + AluSq/x SINE Alu 1 113 -200 1691 197 52 39 chr5 61537812 61538352 -138091798 - MLT2A2 LTR ERVL -3 551 2 967 198 11 6 chr5 61538352 61538534 -138091616 + AluJb SINE Alu 107 289 -23 201 74 0 0 chr5 61538983 61539010 -138091140 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 350 279 133 0 chr5 61539070 61539228 -138090922 + HAL1b LINE L1 557 735 -613 210 91 0 0 chr5 61539542 61539575 -138090575 + (A)n Simple_repeat Simple_repeat 1 33 0 1812 171 50 14 chr5 61539715 61540077 -138090073 - THE1C LTR MaLR 0 375 1 2353 107 0 0 chr5 61540107 61540407 -138089743 + AluSg SINE Alu 1 300 -10 3209 43 0 29 chr5 61540469 61540758 -138089392 + L1PA5 LINE L1 5744 6019 -135 2482 48 3 13 chr5 61540758 61541071 -138089079 + AluY SINE Alu 2 311 0 3209 43 0 29 chr5 61541071 61541201 -138088949 + L1PA5 LINE L1 6019 6151 -3 6640 145 24 13 chr5 61541567 61543796 -138086354 + L1MA2 LINE L1 4039 6304 0 10350 166 31 20 chr5 61543811 61547164 -138082986 + L1MA9 LINE L1 2915 6308 -4 1512 118 56 26 chr5 61547518 61547646 -138082504 + L1MA8 LINE L1 5975 6098 -193 2137 127 0 3 chr5 61547646 61547945 -138082205 + AluSx SINE Alu 1 298 -14 1512 118 56 26 chr5 61547945 61548121 -138082029 + L1MA8 LINE L1 6098 6288 -3 511 175 16 48 chr5 61548137 61548263 -138081887 + L1MC4 LINE L1 7921 8042 0 640 256 6 18 chr5 61548272 61548436 -138081714 + L2 LINE L2 2619 2780 -534 922 286 35 40 chr5 61548443 61548814 -138081336 + L2 LINE L2 2944 3312 -1 2117 121 0 0 chr5 61549214 61549520 -138080630 + AluSg SINE Alu 1 306 0 2126 87 11 7 chr5 61549552 61549839 -138080311 - AluY SINE Alu -17 294 7 464 162 22 123 chr5 61550207 61550386 -138079764 + L1MA9 LINE L1 6148 6308 -4 826 169 27 27 chr5 61550408 61550556 -138079594 - FRAM SINE Alu -7 169 22 2253 118 0 13 chr5 61550611 61550779 -138079371 - AluSx SINE Alu -11 301 137 2621 50 0 0 chr5 61550779 61551082 -138079068 - AluY SINE Alu -8 303 1 2253 118 0 13 chr5 61551082 61551218 -138078932 - AluSx SINE Alu -175 137 1 305 98 0 20 chr5 61551302 61551353 -138078797 + (CCA)n Simple_repeat Simple_repeat 1 50 0 21 0 0 0 chr5 61551460 61551481 -138078669 + AT_rich Low_complexity Low_complexity 1 21 0 608 245 86 23 chr5 61554946 61555248 -138074902 + L1MC5 LINE L1 7609 7929 -32 23 0 0 0 chr5 61555547 61555570 -138074580 + AT_rich Low_complexity Low_complexity 1 23 0 6691 181 36 18 chr5 61555765 61556226 -138073924 + L1M3 LINE L1 3832 4283 -1885 1918 140 49 0 chr5 61556226 61556511 -138073639 + AluJb SINE Alu 1 299 -13 6691 181 36 18 chr5 61556511 61557677 -138072473 + L1M3 LINE L1 4283 5489 -679 587 113 0 0 chr5 61557682 61557762 -138072388 + AluS SINE Alu 1 80 -232 531 281 99 0 chr5 61558783 61558975 -138071175 + HAL1 LINE L1 1589 1799 -708 992 289 51 16 chr5 61558977 61559530 -138070620 - L1MEc LINE L1 -4702 1694 1123 * 2863 246 54 37 chr5 61559528 61560919 -138069231 + L1ME1 LINE L1 2439 3853 -2293 2102 122 11 22 chr5 61560919 61561095 -138069055 + L1MC2 LINE L1 5650 5826 -518 2093 139 3 3 chr5 61561095 61561404 -138068746 + AluSx SINE Alu 1 309 -3 2102 122 11 22 chr5 61561404 61561588 -138068562 + L1MC2 LINE L1 5826 6006 -338 636 147 101 0 chr5 61561595 61561724 -138068426 + L1MC2 LINE L1 6201 6342 -2 1463 249 23 35 chr5 61561808 61561940 -138068210 + L1ME1 LINE L1 3923 4055 -2091 2062 122 7 17 chr5 61561940 61562236 -138067914 + AluSp SINE Alu 1 293 -20 1463 249 23 35 chr5 61562236 61562666 -138067484 + L1ME1 LINE L1 4055 4478 -1668 1856 216 50 31 chr5 61562841 61563359 -138066791 + L1ME1 LINE L1 5614 6141 -25 2622 198 40 42 chr5 61563416 61563914 -138066236 + L1ME1 LINE L1 5433 5930 -236 2012 124 23 10 chr5 61563914 61564220 -138065930 + AluSg SINE Alu 1 310 0 2622 198 40 42 chr5 61564220 61564453 -138065697 + L1ME1 LINE L1 5930 6162 -4 2440 83 0 13 chr5 61564629 61564942 -138065208 - AluSx SINE Alu -3 309 1 3401 186 53 23 chr5 61564957 61565780 -138064370 + L1ME1 LINE L1 5318 6165 -1 262 372 23 8 chr5 61566109 61566238 -138063912 - MIR SINE MIR -61 147 17 274 231 0 88 chr5 61567837 61567928 -138062222 - L2 LINE L2 -1 3312 3230 420 303 113 55 chr5 61568018 61568470 -138061680 - L2 LINE L2 -577 2737 2260 2644 155 52 40 chr5 61568477 61569108 -138061042 - Tigger6a DNA MER2_type -388 695 2 22 35 0 0 chr5 61569121 61569150 -138061000 + AT_rich Low_complexity Low_complexity 1 29 0 1779 189 0 0 chr5 61569150 61569436 -138060714 - AluJb SINE Alu -20 292 7 22 0 0 0 chr5 61569440 61569462 -138060688 + AT_rich Low_complexity Low_complexity 1 22 0 1777 224 97 40 chr5 61569619 61570241 -138059909 - L1ME1 LINE L1 -5 6421 5765 1332 222 92 40 chr5 61570236 61571265 -138058885 - L1ME1 LINE L1 -4069 2337 1095 * 694 186 0 16 chr5 61571265 61571394 -138058756 - FLAM_A SINE Alu -2 131 5 1332 222 92 40 chr5 61571394 61571717 -138058433 - L1ME1 LINE L1 -5311 1095 790 225 229 16 0 chr5 61572175 61572236 -138057914 - L1ME1 LINE L1 -5947 449 388 447 317 201 15 chr5 61572298 61572632 -138057518 + HAL1 LINE L1 1155 1550 -957 1627 113 49 42 chr5 61572655 61572920 -138057230 + AluSx SINE Alu 21 287 -25 497 322 89 23 chr5 61573652 61573777 -138056373 + L1M4 LINE L1 2626 2741 -3405 2513 63 3 0 chr5 61573777 61574080 -138056070 + AluSx SINE Alu 1 304 -8 497 322 89 23 chr5 61574080 61574345 -138055805 + L1M4 LINE L1 2741 3042 -3104 423 98 0 0 chr5 61574346 61574407 -138055743 + (TA)n Simple_repeat Simple_repeat 1 61 0 1067 160 0 5 chr5 61574494 61574694 -138055456 + L1PB1 LINE L1 2 200 -6663 4975 103 209 8 chr5 61574696 61575610 -138054540 + L1PB1 LINE L1 636 1733 -5130 9293 181 31 10 chr5 61575662 61578850 -138051300 + L1PB1 LINE L1 3618 6866 -1 2409 100 3 0 chr5 61578912 61579222 -138050928 + AluSx SINE Alu 1 311 -1 212 311 33 26 chr5 61579528 61579641 -138050509 + CT-rich Low_complexity Low_complexity 3 119 -35 3039 169 32 25 chr5 61579641 61580199 -138049951 - MER68 LTR ERV1 0 562 1 212 311 33 26 chr5 61580199 61580236 -138049914 + CT-rich Low_complexity Low_complexity 119 154 0 346 269 9 46 chr5 61580778 61580821 -138049329 + MIR SINE MIR 1 44 -218 1888 170 0 16 chr5 61580821 61581127 -138049023 + AluJo SINE Alu 1 301 -11 346 269 9 46 chr5 61581127 61581191 -138048959 + MIR SINE MIR 44 104 -158 2093 114 0 42 chr5 61581297 61581605 -138048545 - AluSx SINE Alu -17 295 1 1951 81 35 15 chr5 61581721 61581844 -138048306 - AluSx SINE Alu -47 265 146 2082 123 23 3 chr5 61581844 61582146 -138048004 - AluSg SINE Alu -2 308 1 1088 88 0 0 chr5 61582146 61582282 -138047868 - AluSq/x SINE Alu -176 136 1 303 330 80 40 chr5 61582320 61582544 -138047606 - L1ME LINE L1 -501 5620 5388 279 345 0 0 chr5 61582601 61582688 -138047462 - MIR SINE MIR -3 259 173 1665 167 43 11 chr5 61582834 61583116 -138047034 - AluJo SINE Alu -21 291 1 417 311 53 0 chr5 61583995 61584127 -138046023 + MIR SINE MIR 100 238 -24 247 335 51 25 chr5 61584174 61584332 -138045818 + L2 LINE L2 2649 2810 -504 21 57 0 0 chr5 61584456 61584491 -138045659 + AT_rich Low_complexity Low_complexity 1 35 0 2322 93 0 3 chr5 61586305 61586605 -138043545 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr5 61587239 61587260 -138042890 + AT_rich Low_complexity Low_complexity 1 21 0 347 333 59 38 chr5 61587560 61587865 -138042285 + L1MEd LINE L1 1021 1312 -1195 386 323 21 16 chr5 61587912 61588104 -138042046 + HAL1b LINE L1 441 633 -715 322 156 69 139 chr5 61588244 61588417 -138041733 + L1MC5 LINE L1 7366 7526 -435 571 197 115 32 chr5 61588636 61588854 -138041296 - MER114 LTR ERV -265 383 148 518 330 234 17 chr5 61589353 61589708 -138040442 + L2 LINE L2 2837 3268 -4 340 292 168 0 chr5 61589741 61589902 -138040248 - MIR SINE MIR -8 254 67 21 36 0 0 chr5 61590226 61590254 -138039896 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 61591505 61591540 -138038610 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 61592014 61592042 -138038108 + AT_rich Low_complexity Low_complexity 1 28 0 259 289 233 19 chr5 61592781 61593047 -138037103 - ERVL LTR ERVL -276 5488 5166 857 202 104 21 chr5 61593060 61593387 -138036763 - L1MC5 LINE L1 -51 7910 7557 773 307 51 6 chr5 61593394 61593781 -138036369 - ERVL LTR ERVL -1010 4754 4330 973 217 128 0 chr5 61594277 61594503 -138035647 + MIR SINE MIR 8 262 0 280 286 24 40 chr5 61594654 61594780 -138035370 + L2 LINE L2 2235 2358 -956 200 344 162 17 chr5 61594935 61595176 -138034974 + L2 LINE L2 2686 2961 -353 493 304 82 13 chr5 61595205 61595363 -138034787 + MIR3 SINE MIR 22 190 -18 29 28 0 0 chr5 61595784 61595820 -138034330 + AT_rich Low_complexity Low_complexity 1 36 0 1383 225 106 34 chr5 61596508 61596952 -138033198 + MLT1D LTR MaLR 1 476 -29 1040 268 73 26 chr5 61597221 61597620 -138032530 + L1M4 LINE L1 3519 3940 -2206 1577 189 14 10 chr5 61597620 61597917 -138032233 - AluJo SINE Alu -10 302 5 1040 268 73 26 chr5 61597917 61597939 -138032211 + L1M4 LINE L1 3940 3960 -2186 23695 60 6 1 chr5 61597947 61601200 -138028950 + L1PA6 LINE L1 2257 5522 -632 1137 52 7 13 chr5 61601208 61601362 -138028788 + L1PA6 LINE L1 5996 6148 -6 2340 242 80 30 chr5 61601379 61602221 -138027929 + L1M4 LINE L1 3952 4835 -1311 3117 125 48 60 chr5 61602252 61602454 -138027696 - Tigger2 DNA MER2_type 0 2718 2515 2199 96 0 23 chr5 61602454 61602757 -138027393 - AluSx SINE Alu -16 296 1 3117 125 48 60 chr5 61602757 61603139 -138027011 - Tigger2 DNA MER2_type -203 2515 2141 216 0 0 0 chr5 61603150 61603174 -138026976 + (T)n Simple_repeat Simple_repeat 1 24 0 3867 125 11 19 chr5 61603174 61603797 -138026353 - Tigger2 DNA MER2_type -1503 1215 598 216 67 0 0 chr5 61603844 61603874 -138026276 + (TA)n Simple_repeat Simple_repeat 2 31 0 476 297 94 14 chr5 61603874 61604086 -138026064 - L2 LINE L2 -851 2463 2235 569 180 16 55 chr5 61604137 61604265 -138025885 + MER46A DNA MER2_type 112 234 -2 616 301 170 44 chr5 61604328 61604847 -138025303 - L2 LINE L2 -1203 2111 1462 1779 65 13 4 chr5 61604847 61605076 -138025074 + AluSq SINE Alu 73 303 -10 616 301 170 44 chr5 61605076 61605327 -138024823 - L2 LINE L2 -1852 1462 1244 246 250 16 16 chr5 61605399 61605463 -138024687 + MER58A DNA MER1_type 2 65 -42 1644 106 11 55 chr5 61605482 61605640 -138024510 + LTR8A LTR ERV1 1 143 -584 2238 98 3 0 chr5 61605640 61605981 -138024169 - AluSq SINE Alu 0 313 1 1644 106 11 55 chr5 61605981 61606097 -138024053 + LTR8A LTR ERV1 143 263 -464 1003 113 0 0 chr5 61606100 61606233 -138023917 + AluJo SINE Alu 9 141 -171 2634 142 16 52 chr5 61606268 61606753 -138023397 + LTR8A LTR ERV1 260 727 0 493 212 168 0 chr5 61606757 61606870 -138023280 + MER58A DNA MER1_type 93 224 0 228 320 199 32 chr5 61606884 61607196 -138022954 - L2 LINE L2 -2153 1161 798 473 83 0 14 chr5 61607743 61607815 -138022335 + (TA)n Simple_repeat Simple_repeat 2 72 0 546 255 21 0 chr5 61608349 61608494 -138021656 + L1MD2 LINE L1 6198 6345 -14 302 205 84 48 chr5 61610333 61610416 -138019734 - L2 LINE L2 0 3272 3187 441 342 77 32 chr5 61610576 61611017 -138019133 - L2 LINE L2 -1598 1716 1256 32 0 0 0 chr5 61611872 61611904 -138018246 + AT_rich Low_complexity Low_complexity 1 32 0 22 70 0 0 chr5 61613437 61613480 -138016670 + AT_rich Low_complexity Low_complexity 1 43 0 1196 147 114 0 chr5 61614480 61614691 -138015459 + MER46A DNA MER2_type 2 236 0 237 204 61 0 chr5 61614917 61614966 -138015184 - MIR SINE MIR 0 262 211 * 870 290 85 27 chr5 61614964 61615520 -138014630 - L2 LINE L2 -16 3297 2715 236 222 63 32 chr5 61615808 61615871 -138014279 + L3 LINE CR1 1216 1280 -297 2175 86 21 3 chr5 61615918 61616208 -138013942 + AluY SINE Alu 1 295 -16 1631 76 9 5 chr5 61616217 61616450 -138013700 + AluSp SINE Alu 75 308 0 283 282 46 53 chr5 61616845 61616976 -138013174 - MIR SINE MIR -44 218 89 202 225 0 0 chr5 61617170 61617210 -138012940 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 2039 117 7 7 chr5 61617238 61617536 -138012614 - AluSg1 SINE Alu -11 298 1 389 261 170 46 chr5 61617699 61617852 -138012298 - MER5A DNA MER1_type -6 183 12 313 229 57 57 chr5 61618064 61618143 -138012007 - L1ME LINE L1 -399 5722 5641 2524 52 0 3 chr5 61618143 61618448 -138011702 + AluY SINE Alu 1 304 -7 313 229 57 57 chr5 61618448 61618490 -138011660 - L1ME LINE L1 -479 5642 5601 691 144 86 0 chr5 61618492 61618631 -138011519 + L1MB3 LINE L1 6014 6164 -19 232 272 0 0 chr5 61621125 61621206 -138008944 - L1ME LINE L1 -962 5397 5317 188 361 42 0 chr5 61622114 61622186 -138007964 - MIR SINE MIR -87 175 101 234 176 98 0 chr5 61622246 61622297 -138007853 - L2 LINE L2 0 3272 3217 29 0 0 0 chr5 61622351 61622380 -138007770 + AT_rich Low_complexity Low_complexity 1 29 0 262 359 8 30 chr5 61622583 61622714 -138007436 - MIR3 SINE MIR -73 135 8 1423 189 48 0 chr5 61622832 61623081 -138007069 + AluJb SINE Alu 7 267 -45 1836 224 179 5 chr5 61623129 61623687 -138006463 + L1MC4 LINE L1 7238 7892 -150 644 206 8 0 chr5 61625084 61625210 -138004940 + FLAM_A SINE Alu 9 135 -7 363 258 160 4 chr5 61625230 61625486 -138004664 - L1ME4a LINE L1 -15 6106 5811 291 171 86 0 chr5 61625562 61625632 -138004518 - L1ME4a LINE L1 -418 5703 5628 2285 115 0 0 chr5 61625658 61626013 -138004137 - AluSx SINE Alu 0 355 1 228 67 0 0 chr5 61626356 61626386 -138003764 + (TA)n Simple_repeat Simple_repeat 1 30 0 1810 177 3 7 chr5 61627121 61627420 -138002730 + AluJo SINE Alu 1 298 -14 2364 71 10 0 chr5 61627941 61628238 -138001912 - AluY SINE Alu -11 300 1 256 233 33 17 chr5 61628258 61628318 -138001832 + MIR SINE MIR 40 100 -108 201 274 0 0 chr5 61628984 61629035 -138001115 + L3 LINE CR1 1447 1497 -80 324 0 0 0 chr5 61629429 61629465 -138000685 + (TG)n Simple_repeat Simple_repeat 2 37 0 1973 124 22 0 chr5 61629751 61630026 -138000124 + AluSg SINE Alu 3 283 -27 1144 79 0 0 chr5 61630295 61630435 -137999715 + AluY SINE Alu 1 140 -171 26763 45 6 0 chr5 61630435 61636543 -137993607 + L1PA4 LINE L1 9 6155 0 1376 90 0 0 chr5 61636555 61636733 -137993417 + AluY SINE Alu 120 297 -14 398 247 110 7 chr5 61637186 61637340 -137992810 + MARNA DNA Mariner 202 371 -215 267 235 191 15 chr5 61637416 61637471 -137992679 + MARNA DNA Mariner 404 448 -138 222 37 0 0 chr5 61637471 61637498 -137992652 + (TATG)n Simple_repeat Simple_repeat 2 28 0 267 235 191 15 chr5 61637498 61637578 -137992572 + MARNA DNA Mariner 448 563 -23 2158 129 0 7 chr5 61638729 61639038 -137991112 - AluSx SINE Alu -5 307 1 1972 129 46 29 chr5 61639128 61640239 -137989911 - L1MA8 LINE L1 0 6291 5030 1645 174 30 20 chr5 61640338 61640637 -137989513 + AluJb SINE Alu 1 302 -10 326 286 43 7 chr5 61640727 61640867 -137989283 - HAL1b LINE L1 -13 1335 1191 305 331 17 41 chr5 61641326 61641498 -137988652 - HAL1b LINE L1 -821 527 360 1907 126 0 66 chr5 61641741 61642074 -137988076 - AluSx SINE Alu -1 311 1 206 316 38 0 chr5 61642115 61642194 -137987956 + L2 LINE L2 3220 3301 -12 225 0 0 0 chr5 61642319 61642344 -137987806 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 354 58 58 0 chr5 61643866 61643918 -137986232 - MADE1 DNA Mariner -25 55 1 2117 84 7 0 chr5 61644263 61644537 -137985613 - AluSp SINE Alu -37 276 1 966 172 0 0 chr5 61645017 61645186 -137984964 + AluSg/x SINE Alu 135 303 -7 2153 81 42 14 chr5 61645300 61645583 -137984567 + AluY SINE Alu 1 291 -20 186 231 154 0 chr5 61645896 61645961 -137984189 + MIR SINE MIR 122 196 -66 42842 39 23 6 chr5 61645998 61652046 -137978104 - L1PA3 LINE L1 0 6155 1 2465 74 0 0 chr5 61652047 61652344 -137977806 - AluY SINE Alu -14 297 1 424 234 97 8 chr5 61652434 61652558 -137977592 + L2 LINE L2 3162 3296 -17 1140 225 210 89 chr5 61653524 61653536 -137976614 - Charlie8 DNA MER1_type -584 1833 1824 2156 109 6 37 chr5 61653536 61653858 -137976292 + AluSx SINE Alu 1 312 0 1140 225 210 89 chr5 61653858 61654597 -137975553 - Charlie8 DNA MER1_type -593 1824 991 289 175 53 0 chr5 61654599 61654656 -137975494 + AluJ/FLAM SINE Alu 1 60 -242 242 254 53 67 chr5 61654774 61654960 -137975190 + L1ME3A LINE L1 5382 5583 -576 352 218 39 0 chr5 61655136 61655214 -137974936 + L1ME3A LINE L1 5760 5840 -330 360 0 0 0 chr5 61655421 61655461 -137974689 + (TG)n Simple_repeat Simple_repeat 1 40 0 228 67 0 0 chr5 61655461 61655491 -137974659 + (GA)n Simple_repeat Simple_repeat 2 31 0 431 211 0 0 chr5 61655881 61655957 -137974193 - AluSc SINE Alu -225 84 9 1926 198 39 18 chr5 61655961 61656128 -137974022 - L1 LINE L1 -3602 3963 3801 1863 154 0 3 chr5 61656128 61656421 -137973729 - AluSc SINE Alu -17 292 1 1926 198 39 18 chr5 61656421 61657026 -137973124 - L1 LINE L1 -3764 3801 3183 391 309 163 24 chr5 61657206 61657458 -137972692 - Charlie2 DNA MER1_type -2460 322 36 2065 218 79 6 chr5 61657468 61657829 -137972321 - L1MB3 LINE L1 -7 6176 5762 414 0 0 0 chr5 61657829 61657875 -137972275 + (TG)n Simple_repeat Simple_repeat 1 46 0 2065 218 79 6 chr5 61657875 61658046 -137972104 - L1MB3 LINE L1 -421 5762 5605 220 329 26 13 chr5 61658071 61658147 -137972003 - L2 LINE L2 -2001 1313 1237 411 336 74 66 chr5 61658253 61658766 -137971384 + L1MEc LINE L1 150 658 -5738 813 211 130 0 chr5 61658766 61658951 -137971199 - MER3 DNA MER1_type 0 209 1 411 336 74 66 chr5 61658951 61658991 -137971159 + L1MEc LINE L1 658 696 -5700 1741 140 0 113 chr5 61658991 61659319 -137970831 + AluJb SINE Alu 2 292 -10 411 336 74 66 chr5 61659319 61659538 -137970612 + L1MEc LINE L1 696 929 -5467 471 35 0 0 chr5 61659799 61659856 -137970294 + (CA)n Simple_repeat Simple_repeat 2 58 0 658 239 15 0 chr5 61660751 61660885 -137969265 + BC200 scRNA scRNA 14 149 -51 242 299 0 11 chr5 61661047 61661134 -137969016 + L1 LINE L1 5026 5111 -1035 * 329 26 0 0 chr5 61661132 61661171 -137968979 - L1P LINE L1 -783 5372 5334 5912 88 0 3 chr5 61661171 61661939 -137968211 + L1PA4 LINE L1 5382 6151 -4 189 107 0 0 chr5 61662120 61662148 -137968002 + (CA)n Simple_repeat Simple_repeat 1 28 0 399 324 34 7 chr5 61662219 61662367 -137967783 - MIR3 SINE MIR -51 157 6 7289 120 20 5 chr5 61663833 61664930 -137965220 - THE1B-int LTR MaLR -466 1114 1 1840 193 20 20 chr5 61664930 61665283 -137964867 - THE1B LTR MaLR 0 364 12 529 179 9 28 chr5 61665455 61665561 -137964589 - MLT1A2 LTR MaLR -262 112 9 4957 151 19 21 chr5 61666757 61667395 -137962755 + L1M1 LINE L1 2227 2864 -4701 2531 140 11 3 chr5 61667395 61667767 -137962383 - THE1C LTR MaLR 0 375 1 4957 151 19 21 chr5 61667767 61668063 -137962087 + L1M1 LINE L1 2864 3159 -4406 287 295 82 43 chr5 61668214 61668421 -137961729 + MIR SINE MIR 44 258 -4 266 355 28 0 chr5 61668370 61668477 -137961673 - MIR SINE MIR -24 238 129 * 332 244 121 9 chr5 61668492 61668608 -137961542 - MIR SINE MIR -48 160 32 302 327 138 14 chr5 61669308 61669525 -137960625 + HAL1 LINE L1 201 444 -2063 409 270 158 49 chr5 61669999 61670303 -137959847 - HERV16 LTR ERVL -4409 587 251 474 290 54 39 chr5 61670492 61670751 -137959399 - LTR16B LTR ERVL -23 441 179 229 275 101 0 chr5 61671122 61671231 -137958919 - HAL1 LINE L1 -331 2176 2057 24 32 0 0 chr5 61671316 61671347 -137958803 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr5 61671465 61671489 -137958661 + AT_rich Low_complexity Low_complexity 1 24 0 244 86 0 0 chr5 61671500 61671535 -137958615 - Alu SINE Alu -268 35 1 2810 153 14 24 chr5 61671635 61671764 -137958386 + L1PB2 LINE L1 5658 5787 -364 1778 154 10 10 chr5 61671764 61672062 -137958088 + AluSx SINE Alu 4 301 -11 2810 153 14 24 chr5 61672062 61672423 -137957727 + L1PB2 LINE L1 5787 6143 -8 604 249 34 28 chr5 61674643 61674820 -137955330 + MER5B DNA MER1_type 1 178 0 969 239 146 36 chr5 61674911 61675426 -137954724 - MLT1F1 LTR MaLR 0 567 1 21 0 0 0 chr5 61675589 61675610 -137954540 + AT_rich Low_complexity Low_complexity 1 21 0 222 118 0 0 chr5 61675974 61676008 -137954142 + (CA)n Simple_repeat Simple_repeat 2 35 0 468 0 0 0 chr5 61676380 61676432 -137953718 + (CA)n Simple_repeat Simple_repeat 1 52 0 360 0 0 0 chr5 61676678 61676718 -137953432 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 6492 46 0 1 chr5 61676718 61677494 -137952656 - L1PA6 LINE L1 -16 6138 5364 22 35 0 0 chr5 61677665 61677694 -137952456 + AT_rich Low_complexity Low_complexity 1 29 0 1388 221 21 3 chr5 61677694 61677979 -137952171 + AluJo SINE Alu 6 295 -17 327 289 176 25 chr5 61677981 61678185 -137951965 - L1MC4a LINE L1 -1647 6161 5927 360 0 0 0 chr5 61679450 61679490 -137950660 + (TTCTC)n Simple_repeat Simple_repeat 1 40 0 2051 124 10 3 chr5 61679490 61679796 -137950354 - AluSg SINE Alu -2 308 1 471 296 109 34 chr5 61679950 61680223 -137949927 + L1M4 LINE L1 61 1161 -1103 1723 197 3 12 chr5 61680483 61680813 -137949337 + MER1B DNA MER1_type 1 327 -12 2883 79 14 3 chr5 61680914 61681282 -137948868 + L1PA10 LINE L1 5797 6168 0 1521 284 41 58 chr5 61681310 61682036 -137948114 - L1MEd LINE L1 -5302 817 105 2000 126 25 0 chr5 61682036 61682322 -137947828 - AluSx SINE Alu -19 293 1 1521 284 41 58 chr5 61682322 61682425 -137947725 - L1MEd LINE L1 -6014 105 2 231 175 70 35 chr5 61683192 61683249 -137946901 - L1MC4a LINE L1 -2325 5483 5425 378 216 24 108 chr5 61683263 61683309 -137946841 - L1ME LINE L1 -302 5819 5771 1878 166 3 6 chr5 61683309 61683622 -137946528 - AluSx SINE Alu 0 312 1 378 216 24 108 chr5 61683622 61683742 -137946408 - L1ME LINE L1 -350 5771 5667 1838 38 5 0 chr5 61883905 61884118 -137746032 - AluY SINE Alu -14 297 84 276 282 32 48 chr5 61884704 61884828 -137745322 + MER5A DNA MER1_type 63 184 -5 2247 92 0 0 chr5 61886586 61886908 -137743242 - AluSx SINE Alu 0 322 1 1226 233 96 46 chr5 61887504 61888042 -137742108 + L1MC4a LINE L1 5260 5451 -700 207 0 0 0 chr5 61888966 61888989 -137741161 + (T)n Simple_repeat Simple_repeat 1 23 0 186 43 0 0 chr5 61889092 61889115 -137741035 + (TTTTTG)n Simple_repeat Simple_repeat 1 23 0 2460 76 0 0 chr5 61890199 61890501 -137739649 - AluSc SINE Alu -6 303 2 1545 192 47 31 chr5 61891450 61891809 -137738341 - MLT1A1 LTR MaLR 0 365 1 198 0 0 0 chr5 61892745 61892767 -137737383 + (TTCA)n Simple_repeat Simple_repeat 2 23 0 203 367 0 0 chr5 61892771 61892831 -137737319 - L2 LINE L2 -25 3247 3188 249 218 0 0 chr5 61892861 61892916 -137737234 + T-rich Low_complexity Low_complexity 1 55 0 6990 37 0 0 chr5 61892916 61893786 -137736364 - L1PA3 LINE L1 0 6155 5286 567 264 237 39 chr5 61893835 61894370 -137735780 - L2 LINE L2 -383 2931 2291 470 286 70 41 chr5 61894787 61895006 -137735144 - MIR SINE MIR -32 230 18 2340 74 3 3 chr5 61895205 61895502 -137734648 + AluSx SINE Alu 1 297 -15 2258 88 7 23 chr5 61896873 61897180 -137732970 + AluSq SINE Alu 1 302 -11 473 304 33 17 chr5 61897940 61898121 -137732029 - MIR3 SINE MIR -2 206 23 1849 121 37 4 chr5 61898277 61898578 -137731572 - AluSx SINE Alu 0 310 1 2264 104 0 0 chr5 61898852 61899141 -137731009 - AluSx SINE Alu -23 289 1 1202 148 35 0 chr5 61899511 61899713 -137730437 - MER3 DNA MER1_type 0 209 1 312 345 79 29 chr5 61899933 61900072 -137730078 + MIR SINE MIR 34 179 -83 3076 107 48 21 chr5 61900695 61900940 -137729210 - L1MA2 LINE L1 0 6304 6067 1640 170 16 26 chr5 61900940 61901246 -137728904 - AluSx SINE Alu -9 303 1 3076 107 48 21 chr5 61901246 61901515 -137728635 - L1MA2 LINE L1 -237 6067 5776 2684 105 18 0 chr5 61901523 61901912 -137728238 - L1PA14 LINE L1 -16 6145 5750 5890 158 21 26 chr5 61901912 61903150 -137727000 - L1MA2 LINE L1 -817 5329 4098 2473 87 0 3 chr5 61903150 61903462 -137726688 + AluSq SINE Alu 1 311 -2 359 319 203 8 chr5 61904120 61904371 -137725779 + L3 LINE CR1 1263 1562 -15 585 251 43 114 chr5 61904698 61904753 -137725397 + MIR SINE MIR 5 62 -200 2131 107 28 0 chr5 61904753 61905042 -137725108 - AluSg SINE Alu -12 298 2 585 251 43 114 chr5 61905042 61905150 -137725000 + MIR SINE MIR 62 146 -116 686 232 11 17 chr5 61905150 61905327 -137724823 - MER104 DNA MER2_type -4 176 1 585 251 43 114 chr5 61905327 61905417 -137724733 + MIR SINE MIR 146 241 -21 298 316 70 49 chr5 61905634 61905999 -137724151 - L2 LINE L2 -182 3090 2717 1243 254 78 71 chr5 61906305 61907169 -137722981 - L1MC4 LINE L1 -2 8040 7171 643 166 48 123 chr5 61907220 61907407 -137722743 + MER2 DNA MER2_type 1 173 -172 1531 210 7 7 chr5 61907509 61907804 -137722346 - AluJo SINE Alu -15 297 3 1458 230 0 27 chr5 61908397 61908697 -137721453 - AluJo SINE Alu -20 292 1 21 0 0 0 chr5 61908705 61908726 -137721424 + AT_rich Low_complexity Low_complexity 1 21 0 186 103 0 0 chr5 61909711 61909740 -137720410 + (TG)n Simple_repeat Simple_repeat 2 30 0 325 330 98 11 chr5 61909966 61910230 -137719920 - L2 LINE L2 -1227 2087 1801 486 192 5 28 chr5 61910554 61910736 -137719414 - MER8 DNA MER2_type -15 224 1 2345 87 3 13 chr5 61911115 61911424 -137718726 + AluSc SINE Alu 1 306 -3 2435 80 0 0 chr5 61911489 61911800 -137718350 + AluY SINE Alu 1 311 0 186 143 0 0 chr5 61911968 61912003 -137718147 + (T)n Simple_repeat Simple_repeat 1 35 0 182 88 0 29 chr5 61913430 61913464 -137716686 + (TG)n Simple_repeat Simple_repeat 2 34 0 2306 84 0 7 chr5 61913552 61913851 -137716299 - AluSp SINE Alu -16 297 1 188 158 76 6 chr5 61914055 61914213 -137715937 + (TA)n Simple_repeat Simple_repeat 2 170 0 3128 98 13 6 chr5 61914333 61914800 -137715350 - L1PB2 LINE L1 0 6151 5682 344 284 35 60 chr5 61915061 61915177 -137714973 + MIR SINE MIR 32 144 -64 22 35 0 0 chr5 61915256 61915285 -137714865 + AT_rich Low_complexity Low_complexity 1 29 0 2398 90 3 0 chr5 61915956 61916255 -137713895 + AluSp SINE Alu 1 300 -13 225 202 263 30 chr5 61916644 61916743 -137713407 - L2 LINE L2 -5 3308 3187 2005 152 20 0 chr5 61917477 61917780 -137712370 + AluJb SINE Alu 1 309 -3 226 389 123 12 chr5 61919302 61919464 -137710686 - L2 LINE L2 -3 3269 3090 503 264 61 25 chr5 61919652 61919849 -137710301 - L1ME LINE L1 -399 5771 5568 198 0 0 0 chr5 61920394 61920416 -137709734 + (A)n Simple_repeat Simple_repeat 1 22 0 249 293 253 0 chr5 61920896 61920995 -137709155 - L2 LINE L2 -22 3250 3127 238 313 25 12 chr5 61921643 61921723 -137708427 - MIR3 SINE MIR -28 180 100 3009 125 0 6 chr5 61921955 61922435 -137707715 - LOR1a LTR ERV1 -19 478 2 519 107 0 98 chr5 61922436 61922558 -137707592 - LOR1a-int LTR ERV1 0 8120 8011 * 1637 96 64 4 chr5 61922528 61922777 -137707373 - LOR1a-int LTR ERV1 -2056 6064 5801 * 14111 101 37 20 chr5 61922767 61924059 -137706091 - LOR1a-int LTR ERV1 -2596 5524 4173 4896 41 2 10 chr5 61924059 61924675 -137705475 - L1PA4 LINE L1 -3 6152 5542 14111 101 37 20 chr5 61924675 61925730 -137704420 - LOR1a-int LTR ERV1 -3947 4173 3137 2513 106 18 38 chr5 61925721 61926165 -137703985 - LOR1a-int LTR ERV1 -5376 2744 2310 * 8689 103 32 25 chr5 61926154 61926183 -137703967 - LOR1a-int LTR ERV1 -6660 1460 1433 1624 99 36 0 chr5 61926183 61926404 -137703746 - AluSc SINE Alu -47 262 34 8689 103 32 25 chr5 61926404 61927824 -137702326 - LOR1a-int LTR ERV1 -6687 1433 1 3182 114 18 8 chr5 61927824 61928315 -137701835 - LOR1a LTR ERV1 0 497 2 227 265 206 0 chr5 61928333 61928435 -137701715 + MIR SINE MIR 105 227 -35 673 232 0 0 chr5 61929517 61929642 -137700508 - FLAM_A SINE Alu -7 126 2 22 0 0 0 chr5 61930569 61930591 -137699559 + AT_rich Low_complexity Low_complexity 1 22 0 566 252 113 4 chr5 61932310 61932540 -137697610 - L1ME3 LINE L1 -260 5902 5648 2912 159 15 28 chr5 61932689 61933305 -137696845 - L1MD3 LINE L1 0 7995 7388 711 158 18 42 chr5 61933325 61933490 -137696660 - L1MA8 LINE L1 -5 6286 6126 1921 154 3 7 chr5 61933495 61933793 -137696357 - AluJb SINE Alu -15 297 1 517 177 26 18 chr5 61933850 61933963 -137696187 - MLT1F1 LTR MaLR -453 114 1 2321 182 37 32 chr5 61933966 61934332 -137695818 - L1MD3 LINE L1 -720 7275 6913 1587 184 7 25 chr5 61934332 61934675 -137695475 - AluJo SINE Alu 0 343 6 2218 108 0 29 chr5 61934685 61934999 -137695151 - AluSx SINE Alu -5 307 3 2321 182 37 32 chr5 61934999 61935158 -137694992 - L1MD3 LINE L1 -1090 6905 6735 271 193 53 0 chr5 61935900 61935957 -137694193 + C-rich Low_complexity Low_complexity 6 65 0 2181 20 0 0 chr5 61937021 61937276 -137692874 - L1PA2 LINE L1 0 6155 5901 2291 105 0 3 chr5 61937633 61937939 -137692211 - AluSq SINE Alu -8 305 1 368 253 75 34 chr5 61938657 61938712 -137691438 - MIR3 SINE MIR -41 167 116 2258 114 0 0 chr5 61938712 61939020 -137691130 + AluSx SINE Alu 1 308 -4 368 253 75 34 chr5 61939020 61939124 -137691026 - MIR3 SINE MIR -92 116 1 222 184 286 0 chr5 61939806 61939855 -137690295 - L2 LINE L2 0 3313 3251 27 62 0 0 chr5 61940932 61940980 -137689170 + AT_rich Low_complexity Low_complexity 1 48 0 197 296 141 63 chr5 61941409 61941551 -137688599 - MIR3 SINE MIR -39 169 17 268 286 71 0 chr5 61942819 61942903 -137687247 - MIR SINE MIR -56 206 117 333 150 0 62 chr5 61943506 61943627 -137686523 + MER5A DNA MER1_type 1 157 -32 470 121 0 0 chr5 61943877 61943943 -137686207 - AluSq SINE Alu -118 195 130 719 150 0 17 chr5 61943983 61944103 -137686047 - AluSq/x SINE Alu -195 118 1 268 213 40 27 chr5 61944248 61944323 -137685827 + MIR SINE MIR 120 195 -67 23 33 0 0 chr5 61945299 61945329 -137684821 + AT_rich Low_complexity Low_complexity 1 30 0 1172 208 112 70 chr5 61946909 61947410 -137682740 - Charlie1b DNA MER1_type -1 522 1 548 267 110 16 chr5 61947815 61948006 -137682144 - MIR SINE MIR -6 256 48 2269 77 0 27 chr5 61949495 61949793 -137680357 - AluY SINE Alu -21 290 1 1079 112 24 47 chr5 61951408 61951577 -137678573 + MER1B DNA MER1_type 131 295 -44 216 67 0 0 chr5 61951900 61951930 -137678220 + (TG)n Simple_repeat Simple_repeat 2 31 0 480 244 30 8 chr5 61953958 61954089 -137676061 - L1ME3A LINE L1 -219 5951 5818 1232 203 16 31 chr5 61954128 61954449 -137675701 - MER33 DNA MER1_type -8 316 1 232 237 237 10 chr5 61954465 61954562 -137675588 - L1ME3A LINE L1 -378 5792 5674 247 302 159 32 chr5 61956571 61956697 -137673453 + MIR3 SINE MIR 2 143 -65 277 188 43 58 chr5 61957138 61957207 -137672943 + L3 LINE CR1 1492 1559 -18 259 234 65 13 chr5 61957225 61957302 -137672848 - MER61A LTR ERV1 -202 141 61 194 327 168 47 chr5 61957521 61957628 -137672522 + L2 LINE L2 3148 3267 -5 317 256 187 53 chr5 61958135 61958458 -137671692 - L1ME4a LINE L1 -82 6039 5642 366 42 0 0 chr5 61958458 61958506 -137671644 + (TG)n Simple_repeat Simple_repeat 1 48 0 317 256 187 53 chr5 61958506 61958616 -137671534 - L1ME4a LINE L1 -479 5642 5548 2258 115 0 0 chr5 61958665 61958960 -137671190 + AluSx SINE Alu 1 295 -17 536 319 6 6 chr5 61959414 61959577 -137670573 + MIR SINE MIR 10 172 -90 282 318 27 27 chr5 61961227 61961337 -137668813 - MER5B DNA MER1_type -68 110 1 1864 65 53 8 chr5 61961955 61962217 -137667933 + L1PA7 LINE L1 5878 6151 -3 337 322 52 0 chr5 61962486 61962601 -137667549 - MIR SINE MIR -66 142 22 2472 116 36 38 chr5 61962733 61963155 -137666995 - MSTC LTR MaLR 0 426 9 21 0 0 0 chr5 61963289 61963310 -137666840 + AT_rich Low_complexity Low_complexity 1 21 0 2246 76 0 31 chr5 61963314 61963651 -137666499 + AluY SINE Alu 3 330 0 298 320 41 20 chr5 61964604 61964751 -137665399 + MIR SINE MIR 78 227 -35 276 270 16 16 chr5 61964851 61964914 -137665236 - L2 LINE L2 -53 3219 3157 267 325 104 81 chr5 61965106 61965528 -137664622 + L2 LINE L2 2281 2712 -602 4689 151 67 13 chr5 61965697 61967129 -137663021 - L1PB4 LINE L1 -1 6155 4645 242 88 0 0 chr5 61967230 61967264 -137662886 - L1P4 LINE L1 -344 5824 5791 555 339 38 73 chr5 61967349 61967802 -137662348 + L2 LINE L2 2748 3178 -135 382 261 98 57 chr5 61967802 61968047 -137662103 - MER112 DNA MER1_type -1 255 1 555 339 38 73 chr5 61968047 61968179 -137661971 + L2 LINE L2 3178 3313 0 297 319 94 38 chr5 61969527 61969687 -137660463 + MIR SINE MIR 23 191 -71 363 261 17 17 chr5 61970765 61970880 -137659270 + MIR SINE MIR 107 221 -41 639 78 20 29 chr5 61971647 61971749 -137658401 + L1MB8 LINE L1 6078 6178 0 249 244 195 0 chr5 61973135 61973217 -137656933 - MIR3 SINE MIR -27 181 84 724 252 119 24 chr5 61977701 61977911 -137652239 - MIR SINE MIR -1 261 32 1858 153 7 4 chr5 61977945 61978270 -137651880 - AluSg SINE Alu 0 326 1 2083 126 0 77 chr5 61980860 61981225 -137648925 + MER1B DNA MER1_type 1 337 0 423 0 0 0 chr5 61982759 61982806 -137647344 + (TTCC)n Simple_repeat Simple_repeat 1 47 0 195 42 0 0 chr5 61982907 61982931 -137647219 + (TC)n Simple_repeat Simple_repeat 1 24 0 2239 98 14 0 chr5 61982931 61983226 -137646924 - AluY SINE Alu -11 300 2 2032 131 34 0 chr5 61983483 61983774 -137646376 + AluSx SINE Alu 1 301 -11 460 311 169 14 chr5 61985152 61985371 -137644779 + MIR SINE MIR 10 262 0 707 303 34 26 chr5 61985764 61986031 -137644119 + MLT1H1 LTR MaLR 1 269 -286 325 216 27 14 chr5 61986085 61986159 -137643991 + MLT1H1 LTR MaLR 454 528 -27 308 282 19 19 chr5 61987210 61987313 -137642837 - MIR SINE MIR -86 176 74 417 284 31 56 chr5 61988590 61988621 -137641529 + MIR SINE MIR 103 133 -129 2018 154 28 8 chr5 61988621 61988978 -137641172 + MLT1A1 LTR MaLR 2 365 0 417 284 31 56 chr5 61988978 61989108 -137641042 + MIR SINE MIR 133 260 -2 3090 217 71 35 chr5 61989192 61989997 -137640153 - L1ME1 LINE L1 -22 6078 5303 2785 132 49 10 chr5 61989997 61990491 -137639659 - L1MC1 LINE L1 -5 6328 5816 3090 217 71 35 chr5 61990491 61991442 -137638708 - L1ME1 LINE L1 -797 5303 4248 3388 224 36 9 chr5 61991517 61992382 -137637768 - L1ME1 LINE L1 -1953 4127 3240 1442 124 9 35 chr5 61992382 61992608 -137637542 - AluSx SINE Alu -84 228 9 1432 164 7 30 chr5 61992608 61992877 -137637273 - MSTD LTR MaLR -133 263 1 1605 221 31 33 chr5 61992888 61993377 -137636773 - L1ME1 LINE L1 -3548 2532 2045 22 35 0 0 chr5 61993491 61993520 -137636630 + AT_rich Low_complexity Low_complexity 1 29 0 242 71 0 24 chr5 61993665 61993707 -137636443 + (TA)n Simple_repeat Simple_repeat 2 42 0 231 109 18 36 chr5 61993749 61993804 -137636346 + (TA)n Simple_repeat Simple_repeat 2 55 0 2564 265 62 49 chr5 61993806 61994989 -137635161 - L1ME1 LINE L1 -4291 1789 624 279 71 0 0 chr5 61994989 61995031 -137635119 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 7531 21 2 0 chr5 61995031 61996300 -137633850 - L1PA3 LINE L1 -10 6145 4870 2564 265 62 49 chr5 61996300 61996558 -137633592 - L1ME1 LINE L1 -5455 625 330 2037 132 6 82 chr5 61996858 61997222 -137632928 - MER1B DNA MER1_type -1 336 1 72 40 0 0 chr5 61998200 61998300 -137631850 + AT_rich Low_complexity Low_complexity 1 100 0 239 271 47 12 chr5 61999080 61999165 -137630985 - MER20B DNA MER1_type -662 121 34 201 108 0 0 chr5 61999182 61999219 -137630931 + (T)n Simple_repeat Simple_repeat 1 37 0 269 246 142 15 chr5 61999219 61999353 -137630797 + L2 LINE L2 1630 1780 -1534 467 282 37 31 chr5 62001628 62001791 -137628359 + MIR3 SINE MIR 38 201 -7 606 282 10 20 chr5 62003869 62004071 -137626079 + MIR SINE MIR 43 242 -20 220 122 24 0 chr5 62004455 62004496 -137625654 + T-rich Low_complexity Low_complexity 2 43 0 297 167 0 0 chr5 62005506 62005560 -137624590 + (TA)n Simple_repeat Simple_repeat 2 55 0 2080 104 10 3 chr5 62005715 62006012 -137624138 - AluSx SINE Alu -7 305 7 1209 110 12 6 chr5 62006183 62006356 -137623794 + AluSp SINE Alu 126 299 -14 241 320 0 0 chr5 62007530 62007605 -137622545 + L1ME LINE L1 5577 5651 -470 1485 215 35 30 chr5 62010895 62011263 -137618887 - MLT1A2 LTR MaLR -4 370 1 815 175 115 33 chr5 62013374 62013557 -137616593 - AluJb SINE Alu -17 295 98 210 128 0 0 chr5 62014974 62015013 -137615137 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 2180 114 0 43 chr5 62016352 62016676 -137613474 - AluSg SINE Alu 0 310 1 256 327 144 0 chr5 62017004 62017108 -137613042 - MIR3 SINE MIR -49 159 41 266 256 34 3 chr5 62018351 62018478 -137611672 - L1MEc LINE L1 -4977 1621 1317 189 222 0 0 chr5 62019921 62019984 -137610166 + T-rich Low_complexity Low_complexity 1 63 0 227 157 20 0 chr5 62020660 62020711 -137609439 + (TA)n Simple_repeat Simple_repeat 1 52 0 24 0 0 0 chr5 62021091 62021115 -137609035 + AT_rich Low_complexity Low_complexity 1 24 0 455 236 150 29 chr5 62021697 62021837 -137608313 - L2 LINE L2 0 3272 3116 2377 161 44 29 chr5 62022089 62022616 -137607534 - L1MB2 LINE L1 -10 6161 5627 1291 107 10 15 chr5 62023686 62023882 -137606268 - L1PA10 LINE L1 -3 6165 5971 1518 258 119 52 chr5 62023989 62024478 -137605672 - L2 LINE L2 -30 3283 2828 1453 102 216 8 chr5 62024478 62024723 -137605427 - AluSq SINE Alu -17 296 1 1518 258 119 52 chr5 62024723 62025250 -137604900 - L2 LINE L2 -485 2828 2186 810 233 97 5 chr5 62026589 62026795 -137603355 - MIR SINE MIR -6 256 32 214 172 0 52 chr5 62027072 62027130 -137603020 + (TATG)n Simple_repeat Simple_repeat 2 56 0 291 202 0 101 chr5 62027201 62027290 -137602860 - MLT1J LTR MaLR -197 314 235 432 193 0 24 chr5 62028588 62028671 -137601479 - Tigger5 DNA MER2_type -1 2322 2242 470 165 31 0 chr5 62028679 62028776 -137601374 - L1MA4A LINE L1 -23 6280 6181 4112 153 150 18 chr5 62028779 62030120 -137600030 - L1MA4A LINE L1 -187 6116 4584 4342 117 1 60 chr5 62030128 62030844 -137599306 - THE1C-int LTR MaLR -904 676 3 1475 148 133 21 chr5 62030846 62031183 -137598967 - THE1C LTR MaLR 0 375 1 1363 189 87 0 chr5 62031432 62031707 -137598443 + AluJo SINE Alu 3 301 -11 514 15 46 0 chr5 62032731 62032796 -137597354 - MADE1 DNA Mariner 0 80 13 352 258 92 8 chr5 62032798 62032918 -137597232 - MIR SINE MIR -59 203 74 814 316 129 24 chr5 62033128 62033878 -137596272 + HAL1b LINE L1 103 931 -417 21 0 0 0 chr5 62034180 62034201 -137595949 + AT_rich Low_complexity Low_complexity 1 21 0 180 266 165 0 chr5 62035259 62035338 -137594812 - MIR SINE MIR -14 248 157 186 114 0 57 chr5 62036407 62036442 -137593708 - MIR SINE MIR -148 114 82 3156 183 52 2 chr5 62036597 62037230 -137592920 - L1MB7 LINE L1 0 6184 5520 214 273 127 18 chr5 62037267 62037377 -137592773 + MIR SINE MIR 129 250 -12 715 172 19 19 chr5 62037856 62038005 -137592145 - MSTD LTR MaLR 0 396 263 1968 151 55 25 chr5 62039168 62039532 -137590618 - THE1C LTR MaLR 0 375 1 275 357 25 0 chr5 62039536 62039693 -137590457 - MIR SINE MIR -29 233 73 313 174 43 0 chr5 62093050 62093119 -137537031 - LTR33A LTR ERVL -1 522 451 15257 122 22 26 chr5 62093272 62095690 -137534460 + Tigger1 DNA MER2_type 11 2418 0 225 65 0 0 chr5 62095744 62095775 -137534375 + (CTG)n Simple_repeat Simple_repeat 3 33 0 244 263 40 40 chr5 62095962 62096061 -137534089 - LTR33A LTR ERVL -361 162 64 801 134 0 0 chr5 62096926 62097053 -137533097 + AluSp/q SINE Alu 186 312 -1 517 278 51 69 chr5 62097370 62097672 -137532478 - MLT1G3 LTR MaLR -238 317 10 222 326 0 54 chr5 62097714 62097810 -137532340 - MIR SINE MIR -102 106 15 1209 229 63 60 chr5 62098559 62099022 -137531128 - MLT2C2 LTR ERVL 0 464 1 477 316 23 47 chr5 62099229 62099444 -137530706 + L2 LINE L2 2820 3029 -243 198 217 167 0 chr5 62099443 62099503 -137530647 + MIR SINE MIR 183 252 -10 * 468 325 132 30 chr5 62099542 62099982 -137530168 - L2 LINE L2 0 3313 2829 267 325 181 0 chr5 62099994 62100160 -137529990 + L2 LINE L2 3076 3271 -1 275 279 50 50 chr5 62100185 62100325 -137529825 + L2 LINE L2 3133 3272 0 564 273 58 0 chr5 62101403 62101557 -137528593 - MER5B DNA MER1_type -15 163 1 488 348 14 5 chr5 62102090 62102300 -137527850 + MIR SINE MIR 50 261 -1 277 168 19 206 chr5 62102427 62102534 -137527616 - MER5B DNA MER1_type -88 90 4 25 75 0 0 chr5 62102701 62102754 -137527396 + AT_rich Low_complexity Low_complexity 1 53 0 341 295 93 22 chr5 62102878 62103017 -137527133 - L1ME4a LINE L1 -224 5897 5749 2399 179 26 20 chr5 62103018 62103477 -137526673 - MLT1C LTR MaLR 0 467 6 1595 162 42 12 chr5 62104061 62104394 -137525756 + MER58D DNA MER1_type 1 343 -43 906 208 11 22 chr5 62104420 62104603 -137525547 - MER5A DNA MER1_type -8 181 1 664 227 12 35 chr5 62104697 62104869 -137525281 + MIR SINE MIR 59 226 -36 481 317 82 29 chr5 62105840 62106048 -137524102 - MIR SINE MIR -6 256 38 642 174 145 22 chr5 62106492 62106630 -137523520 + MIR SINE MIR 21 175 -87 408 71 0 0 chr5 62107324 62107380 -137522770 + (TAA)n Simple_repeat Simple_repeat 3 58 0 1612 258 42 27 chr5 62107483 62107963 -137522187 + LTR16C LTR ERVL 4 490 -1 418 282 184 49 chr5 62107963 62108444 -137521706 - MLT1K LTR MaLR -40 548 2 502 331 8 0 chr5 62109697 62109824 -137520326 - MER91A DNA MER1_type -50 146 19 684 211 30 80 chr5 62109890 62110089 -137520061 + MER5A DNA MER1_type 1 189 0 183 80 0 0 chr5 62110956 62110981 -137519169 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 238 269 152 70 chr5 62111234 62111405 -137518745 + MIR SINE MIR 72 256 -6 231 36 0 0 chr5 62111442 62111470 -137518680 + (TTATG)n Simple_repeat Simple_repeat 3 30 0 484 279 44 65 chr5 62111491 62111640 -137518510 + MIR SINE MIR 11 155 -107 1994 60 45 0 chr5 62111640 62111905 -137518245 - AluY SINE Alu -12 299 23 484 279 44 65 chr5 62111905 62111984 -137518166 + MIR SINE MIR 155 234 -28 244 347 32 0 chr5 62112056 62112151 -137517999 - L2 LINE L2 -38 3234 3137 270 213 133 13 chr5 62112452 62112527 -137517623 + L2 LINE L2 3229 3312 -1 182 268 52 93 chr5 62113192 62113289 -137516861 + L2 LINE L2 2949 3041 -272 339 321 130 0 chr5 62113698 62113829 -137516321 - MER91A DNA MER1_type -34 162 15 204 163 23 0 chr5 62113878 62113921 -137516229 + (TTA)n Simple_repeat Simple_repeat 3 46 0 899 230 11 37 chr5 62114854 62115504 -137514646 - L1MC4 LINE L1 -26 8016 7280 207 100 0 0 chr5 62116642 62116672 -137513478 + (GA)n Simple_repeat Simple_repeat 1 30 0 199 309 62 12 chr5 62116861 62116942 -137513208 + L2 LINE L2 2610 2694 -620 941 197 78 14 chr5 62117085 62117303 -137512847 - MIR SINE MIR -8 254 23 664 250 97 57 chr5 62117372 62117620 -137512530 - MIR SINE MIR -1 261 4 243 0 0 0 chr5 62118630 62118657 -137511493 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 454 251 111 35 chr5 62118660 62118831 -137511319 - L2 LINE L2 -16 3297 3114 462 322 158 35 chr5 62119321 62119725 -137510425 - L2 LINE L2 -1 3271 2818 1401 165 0 0 chr5 62119845 62120075 -137510075 - AluJb SINE Alu -82 230 1 403 234 22 0 chr5 62120147 62120252 -137509898 - L1ME LINE L1 -359 5803 5695 318 273 45 0 chr5 62120293 62120403 -137509747 - MIR SINE MIR -147 115 1 218 313 33 80 chr5 62120489 62120639 -137509511 - MER5A DNA MER1_type -30 159 17 594 184 109 20 chr5 62121127 62121274 -137508876 - MER5B DNA MER1_type -18 160 1 194 298 96 32 chr5 62121848 62121942 -137508208 + MIR3 SINE MIR 106 205 -3 2080 113 7 3 chr5 62122151 62122461 -137507689 + AluSx SINE Alu 1 311 -1 524 299 105 34 chr5 62122908 62123233 -137506917 - MLT1L LTR MaLR -4 611 264 281 239 201 19 chr5 62124919 62125078 -137505072 - LTR33 LTR ERVL -10 511 324 540 217 93 68 chr5 62125098 62125259 -137504891 - LTR33 LTR ERVL -319 202 11 1106 266 8 0 chr5 62125972 62126209 -137503941 - MIR SINE MIR -3 259 21 273 290 19 37 chr5 62126280 62126387 -137503763 - MIR3 SINE MIR -16 192 88 1598 267 47 20 chr5 62127748 62128254 -137501896 - LTR33 LTR ERVL -1 520 1 595 182 172 57 chr5 62128493 62128685 -137501465 + MER20 DNA MER1_type 2 215 -4 21 57 0 0 chr5 62129491 62129526 -137500624 + AT_rich Low_complexity Low_complexity 1 35 0 1242 68 193 0 chr5 62129578 62129770 -137500380 - MER30 DNA MER1_type -1 229 1 324 283 113 13 chr5 62129849 62130035 -137500115 - L1MC4a LINE L1 -155 5966 5762 251 254 14 14 chr5 62130398 62130469 -137499681 + MIR SINE MIR 81 151 -111 22 0 0 0 chr5 62131007 62131029 -137499121 + AT_rich Low_complexity Low_complexity 1 22 0 370 310 108 66 chr5 62132660 62133041 -137497109 - L1ME4a LINE L1 0 6121 5725 189 74 0 0 chr5 62133042 62133069 -137497081 + (T)n Simple_repeat Simple_repeat 1 27 0 428 278 58 30 chr5 62133114 62133452 -137496698 - L1ME4a LINE L1 -444 5677 5197 11920 83 11 0 chr5 62133481 62135857 -137494293 + L1PA7 LINE L1 3765 6152 -2 1958 128 0 3 chr5 62135913 62136201 -137493949 - AluSx SINE Alu -25 287 1 516 222 98 72 chr5 62136484 62136678 -137493472 + MIR SINE MIR 48 246 -16 466 274 185 7 chr5 62137581 62137727 -137492423 - MER5B DNA MER1_type 0 178 7 579 228 208 0 chr5 62137814 62137963 -137492187 - MER5A DNA MER1_type -1 188 9 356 247 21 52 chr5 62138011 62138108 -137492042 - MER5A DNA MER1_type -89 100 7 204 311 89 11 chr5 62139963 62140053 -137490097 + L2 LINE L2 3187 3283 -30 783 277 40 25 chr5 62140275 62140641 -137489509 + MLT1L LTR MaLR 174 603 -12 1673 203 143 31 chr5 62141710 62141782 -137488368 - MLT1D LTR MaLR 0 505 442 1893 191 20 23 chr5 62141782 62142179 -137487971 + MSTD LTR MaLR 1 396 0 1673 203 143 31 chr5 62142179 62142560 -137487590 - MLT1D LTR MaLR -63 442 1 378 238 48 0 chr5 62142567 62142651 -137487499 + MIR SINE MIR 110 197 -65 191 200 22 22 chr5 62142826 62142871 -137487279 + L2 LINE L2 3261 3305 -8 2396 38 0 3 chr5 62144476 62144769 -137485381 - AluY SINE Alu -6 305 14 806 179 12 12 chr5 62145154 62145327 -137484823 + MER53 DNA DNA 5 177 -12 195 274 0 16 chr5 62145857 62145919 -137484231 - L3b LINE CR1 -198 1385 1325 349 318 32 37 chr5 62146538 62146727 -137483423 + MER5A DNA MER1_type 2 189 0 250 325 243 12 chr5 62147677 62148006 -137482144 - L3 LINE CR1 -10 1567 1163 2379 162 46 17 chr5 62148544 62148958 -137481192 + MSTB LTR MaLR 1 426 0 1246 298 115 53 chr5 62149128 62150112 -137480038 - L2 LINE L2 -562 2752 1651 1970 121 7 0 chr5 62150112 62150394 -137479756 + AluSx SINE Alu 3 286 -26 1246 298 115 53 chr5 62150394 62150837 -137479313 - L2 LINE L2 -1663 1651 1237 270 332 101 23 chr5 62150875 62151092 -137479058 + L2 LINE L2 3080 3313 0 180 191 0 48 chr5 62151204 62151246 -137478904 - L2 LINE L2 -1062 2252 2213 814 189 72 22 chr5 62151345 62151567 -137478583 - MER20B DNA MER1_type -6 777 545 436 243 186 7 chr5 62151571 62151711 -137478439 - MER5A DNA MER1_type -6 183 19 1801 197 101 18 chr5 62151861 62152308 -137477842 - MER20B DNA MER1_type -264 519 36 366 349 91 82 chr5 62152734 62153175 -137476975 + L2 LINE L2 2826 3270 -2 26 0 0 0 chr5 62153192 62153218 -137476932 + AT_rich Low_complexity Low_complexity 1 26 0 258 233 137 0 chr5 62153606 62153679 -137476471 + MIR SINE MIR 87 169 -93 295 246 31 0 chr5 62153890 62153955 -137476195 - L2 LINE L2 -17 3296 3230 200 301 145 0 chr5 62153996 62154079 -137476071 - L2 LINE L2 -223 3090 2996 1705 168 10 19 chr5 62154081 62154390 -137475760 + AluJo SINE Alu 1 306 -6 227 274 206 0 chr5 62154436 62154509 -137475641 - MIR SINE MIR -64 198 111 1052 295 84 10 chr5 62154751 62155216 -137474934 + L2 LINE L2 2514 3060 -253 1341 250 97 39 chr5 62155302 62155861 -137474289 + MLT1E LTR MaLR 3 593 0 408 266 131 31 chr5 62157341 62157563 -137472587 - MLT1L LTR MaLR -8 607 364 296 240 20 40 chr5 62157638 62157738 -137472412 - MLT1J1 LTR MaLR -301 145 48 432 269 19 9 chr5 62158256 62158364 -137471786 + MER5B DNA MER1_type 1 109 -69 2496 188 88 137 chr5 62158371 62159480 -137470670 + MER63D DNA MER1_type 7 1061 0 269 158 18 18 chr5 62159480 62159537 -137470613 + MER5B DNA MER1_type 104 160 -18 199 262 0 0 chr5 62159831 62159873 -137470277 + MIR SINE MIR 210 251 -11 2146 112 0 0 chr5 62159958 62160253 -137469897 - AluSx SINE Alu -15 297 3 814 278 89 3 chr5 62160358 62160671 -137469479 + LTR33A LTR ERVL 130 469 -54 631 273 102 37 chr5 62161048 62161458 -137468692 - LTR33 LTR ERVL -8 513 77 285 313 61 8 chr5 62161747 62161878 -137468272 + MIR3 SINE MIR 68 205 -3 359 326 97 17 chr5 62165759 62165934 -137464216 - MER5A DNA MER1_type 0 189 1 252 0 0 0 chr5 62166049 62166077 -137464073 + (TG)n Simple_repeat Simple_repeat 1 28 0 * 528 56 0 0 chr5 62166076 62166148 -137464002 + (GA)n Simple_repeat Simple_repeat 1 72 0 221 170 85 0 chr5 62166712 62166759 -137463391 - L2 LINE L2 -39 3233 3183 482 283 88 8 chr5 62169245 62169442 -137460708 - MIR3 SINE MIR -46 162 1 510 158 84 0 chr5 62169661 62169756 -137460394 - U6 snRNA snRNA 0 107 5 496 201 109 29 chr5 62169759 62169933 -137460217 - MER112 DNA MER1_type -72 188 1 534 273 20 0 chr5 62169969 62170119 -137460031 + MIR3 SINE MIR 49 201 -7 23 33 0 0 chr5 62171266 62171296 -137458854 + AT_rich Low_complexity Low_complexity 1 30 0 216 171 26 66 chr5 62171682 62171758 -137458392 + A-rich Low_complexity Low_complexity 6 78 0 382 321 0 0 chr5 62172406 62172512 -137457638 - L1MC4 LINE L1 -1340 6702 6597 245 146 98 0 chr5 62173214 62173255 -137456895 + MIR3 SINE MIR 121 165 -43 509 290 218 15 chr5 62173289 62173624 -137456526 - L2 LINE L2 0 3313 2911 257 328 67 0 chr5 62173792 62173911 -137456239 - MLT1I LTR MaLR -3 406 280 578 336 58 30 chr5 62175232 62175562 -137454588 + L2 LINE L2 2835 3173 -99 2416 153 44 7 chr5 62175574 62175985 -137454165 - MSTB LTR MaLR 0 426 1 192 225 0 0 chr5 62176048 62176088 -137454062 + L2 LINE L2 3265 3304 -9 2013 113 3 10 chr5 62177311 62177630 -137452520 - AluSq SINE Alu 0 313 1 1248 203 106 9 chr5 62177797 62178117 -137452033 - LTR50 LTR ERVL -39 756 406 213 39 0 0 chr5 62178465 62178491 -137451659 + (TG)n Simple_repeat Simple_repeat 1 26 0 * 234 0 0 0 chr5 62178490 62178516 -137451634 + (GA)n Simple_repeat Simple_repeat 1 26 0 354 263 119 17 chr5 62179410 62179528 -137450622 - L2 LINE L2 0 3313 3184 353 325 85 19 chr5 62179545 62179757 -137450393 - L1ME4a LINE L1 -218 5903 5678 523 242 34 34 chr5 62179805 62179954 -137450196 - LTR67 LTR ERVL -1 556 408 227 359 19 29 chr5 62180515 62180618 -137449532 - MIR SINE MIR -67 141 40 1636 214 80 44 chr5 62182059 62182867 -137447283 + MER97a DNA MER1_type? 10 894 0 297 313 30 0 chr5 62183138 62183237 -137446913 - LTR67 LTR ERVL -352 205 104 258 32 0 0 chr5 62183464 62183495 -137446655 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 1873 151 0 14 chr5 62183495 62183779 -137446371 - AluJb SINE Alu -32 280 1 249 152 0 0 chr5 62184452 62184497 -137445653 + MIR SINE MIR 73 118 -90 243 0 0 0 chr5 62184904 62184931 -137445219 + (CA)n Simple_repeat Simple_repeat 1 27 0 209 280 0 0 chr5 62185289 62185339 -137444811 + CT-rich Low_complexity Low_complexity 1 50 0 219 300 108 50 chr5 62186365 62186605 -137443545 + L2 LINE L2 2553 2806 -508 441 223 230 7 chr5 62186616 62186764 -137443386 + MER5A DNA MER1_type 3 183 -6 262 169 0 39 chr5 62189599 62189676 -137440474 + GA-rich Low_complexity Low_complexity 3 76 0 484 335 58 31 chr5 62191531 62191856 -137438294 + L2 LINE L2 2840 3173 -99 2415 153 44 7 chr5 62191868 62192279 -137437871 - MSTB LTR MaLR 0 426 1 2140 113 3 10 chr5 62193605 62193924 -137436226 - AluSq SINE Alu 0 313 1 1235 203 106 9 chr5 62194091 62194411 -137435739 - LTR50 LTR ERVL -39 756 406 213 39 0 0 chr5 62194759 62194785 -137435365 + (TG)n Simple_repeat Simple_repeat 1 26 0 * 234 0 0 0 chr5 62194784 62194810 -137435340 + (GA)n Simple_repeat Simple_repeat 1 26 0 301 263 119 17 chr5 62195704 62195822 -137434328 - L2 LINE L2 0 3313 3184 520 242 34 34 chr5 62196099 62196248 -137433902 - LTR67 LTR ERVL -1 556 408 195 359 19 29 chr5 62196809 62196912 -137433238 - MIR SINE MIR -67 141 40 1636 214 80 44 chr5 62198351 62199159 -137430991 + MER97c DNA MER1_type? 10 894 0 297 313 30 0 chr5 62199430 62199529 -137430621 - LTR67 LTR ERVL -352 205 104 258 32 0 0 chr5 62199756 62199787 -137430363 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 1873 151 0 14 chr5 62199787 62200071 -137430079 - AluJb SINE Alu -32 280 1 249 152 0 0 chr5 62200744 62200789 -137429361 + MIR SINE MIR 73 118 -90 297 0 0 0 chr5 62201198 62201231 -137428919 + (CA)n Simple_repeat Simple_repeat 1 33 0 209 280 0 0 chr5 62201588 62201638 -137428512 + CT-rich Low_complexity Low_complexity 1 50 0 219 300 108 50 chr5 62202664 62202904 -137427246 + L2 LINE L2 2553 2806 -508 441 223 230 7 chr5 62202915 62203063 -137427087 + MER5A DNA MER1_type 3 183 -6 639 103 0 0 chr5 62205795 62205892 -137424258 + (TTCC)n Simple_repeat Simple_repeat 4 100 0 1050 218 130 90 chr5 62207270 62207802 -137422348 + MLT1H1 LTR MaLR 3 555 0 258 132 0 0 chr5 62210594 62210647 -137419503 + (A)n Simple_repeat Simple_repeat 1 53 0 24 0 0 0 chr5 62211707 62211731 -137418419 + AT_rich Low_complexity Low_complexity 1 24 0 396 197 49 8 chr5 62212815 62212937 -137417213 + L1ME1 LINE L1 3108 3234 -2912 312 158 0 0 chr5 62212977 62213034 -137417116 + GA-rich Low_complexity Low_complexity 2 58 0 896 262 46 11 chr5 62213112 62213479 -137416671 + L1ME1 LINE L1 3292 3665 -2481 458 194 61 97 chr5 62213487 62213683 -137416467 - L1M4 LINE L1 -2984 3162 2974 2468 246 86 44 chr5 62213727 62214689 -137415461 + L1ME1 LINE L1 3657 4659 -1487 * 5063 182 45 20 chr5 62214676 62215789 -137414361 - L1MB1 LINE L1 -1234 4912 3772 1137 188 54 116 chr5 62215790 62216270 -137413880 + L1MB1 LINE L1 4915 5365 -777 2708 166 23 12 chr5 62216270 62216757 -137413393 + L1MB1 LINE L1 5677 6168 0 2412 217 27 69 chr5 62216807 62217919 -137412231 + L1ME1 LINE L1 4644 5708 -743 495 144 5 17 chr5 62217919 62218120 -137412030 - AluJb SINE Alu -20 292 44 992 201 154 81 chr5 62218149 62218325 -137411825 + L1ME1 LINE L1 5703 5865 -301 2507 66 0 0 chr5 62218325 62218628 -137411522 + AluY SINE Alu 1 303 -8 992 201 154 81 chr5 62218628 62218722 -137411428 + L1ME1 LINE L1 5865 5951 -215 1954 140 0 3 chr5 62218722 62219036 -137411114 + AluSx SINE Alu 1 313 0 992 201 154 81 chr5 62219036 62219146 -137411004 + L1ME1 LINE L1 5951 6113 -53 966 307 142 10 chr5 62219479 62220102 -137410048 + L2 LINE L2 2444 3144 -169 815 275 73 50 chr5 62220115 62220593 -137409557 + L2 LINE L2 2748 3244 -69 231 196 20 0 chr5 62220765 62220816 -137409334 + L2 LINE L2 3262 3313 0 223 332 45 36 chr5 62221054 62221301 -137408849 + L2 LINE L2 2848 3096 -176 2549 61 0 0 chr5 62221459 62221754 -137408396 + AluY SINE Alu 1 295 -16 508 262 103 0 chr5 62222487 62222632 -137407518 + MER5B DNA MER1_type 19 178 0 1486 112 36 5 chr5 62222705 62222928 -137407222 - MER30 DNA MER1_type 0 230 1 302 277 7 66 chr5 62222946 62223083 -137407067 + MLT1E LTR MaLR 1 129 -464 397 99 42 0 chr5 62224965 62225036 -137405114 + CT-rich Low_complexity Low_complexity 4 77 0 1681 185 23 0 chr5 62225039 62225304 -137404846 - AluJb SINE Alu -39 273 3 2339 107 0 0 chr5 62226539 62226847 -137403303 - AluSg SINE Alu -2 308 1 426 273 61 8 chr5 62227999 62228131 -137402019 + L1ME LINE L1 5686 5824 -297 319 256 60 30 chr5 62228555 62228688 -137401462 - LTR33A LTR ERVL -94 429 293 343 315 154 0 chr5 62228768 62228917 -137401233 - LTR33 LTR ERVL -322 199 28 377 198 27 81 chr5 62229382 62229493 -137400657 - MIR SINE MIR -38 224 120 * 743 233 171 0 chr5 62229475 62229668 -137400482 + MIR SINE MIR 13 238 -24 462 299 14 27 chr5 62229673 62229820 -137400330 - MIR SINE MIR -116 146 2 271 209 0 90 chr5 62231068 62231135 -137399015 + MIR3 SINE MIR 122 182 -26 6278 133 5 12 chr5 62231330 62232913 -137397237 + L1PA10 LINE L1 4142 5670 -498 2639 51 12 9 chr5 62232913 62233246 -137396904 - L1PA6 LINE L1 -2 6152 5819 3989 88 16 0 chr5 62233246 62233754 -137396396 + L1PA10 LINE L1 5646 6166 -2 402 318 146 0 chr5 62233815 62233966 -137396184 - MER91A DNA MER1_type -20 176 4 297 75 0 0 chr5 62234049 62234089 -137396061 + (CA)n Simple_repeat Simple_repeat 2 41 0 1361 324 108 21 chr5 62234498 62235254 -137394896 - ERVL LTR ERVL -1289 4475 3786 2017 110 32 0 chr5 62235254 62235536 -137394614 + AluSx SINE Alu 1 291 -21 1361 324 108 21 chr5 62235536 62236096 -137394054 - ERVL LTR ERVL -1978 3786 2977 565 198 66 8 chr5 62236103 62236224 -137393926 + MLT1G LTR MaLR 2 129 -461 208 200 36 0 chr5 62236225 62236280 -137393870 + (CTATA)n Simple_repeat Simple_repeat 4 60 0 * 238 145 32 32 chr5 62236266 62236328 -137393822 + (TA)n Simple_repeat Simple_repeat 1 62 0 1539 266 75 18 chr5 62236340 62236645 -137393505 + MLT1G LTR MaLR 104 452 -138 1049 206 5 10 chr5 62236645 62236849 -137393301 - MER105 DNA DNA -1 203 1 1539 266 75 18 chr5 62236849 62236997 -137393153 + MLT1G LTR MaLR 452 590 0 1969 294 55 38 chr5 62237010 62237849 -137392301 - ERVL LTR ERVL -2799 2965 2113 501 340 78 50 chr5 62237883 62238783 -137391367 - ERVL LTR ERVL -4048 1716 792 960 277 143 51 chr5 62239107 62239652 -137390498 + MLT1G1 LTR MaLR 1 595 0 308 167 24 36 chr5 62240009 62240093 -137390057 + L1MA10 LINE L1 6252 6334 0 770 252 44 26 chr5 62240097 62240323 -137389827 + MIR SINE MIR 32 261 -1 610 270 57 6 chr5 62240533 62240729 -137389421 + MIR SINE MIR 2 204 -51 243 211 0 35 chr5 62240751 62240808 -137389342 + MLT1F LTR MaLR 5 59 -483 228 290 58 14 chr5 62240914 62240983 -137389167 + MLT1F LTR MaLR 124 195 -360 826 245 5 11 chr5 62241175 62241359 -137388791 + MLT1G LTR MaLR 408 590 0 528 307 65 63 chr5 62242298 62242695 -137387455 + L3 LINE CR1 751 1148 -429 451 335 69 74 chr5 62242724 62243257 -137386893 - L2 LINE L2 -4 3268 2741 491 199 6 90 chr5 62243477 62243643 -137386507 + L2 LINE L2 3112 3263 -50 193 327 18 0 chr5 62243658 62243713 -137386437 + L3 LINE CR1 1267 1322 -255 1768 230 106 4 chr5 62243713 62244213 -137385937 + L1M4 LINE L1 4022 4572 -1574 * 3485 246 109 32 chr5 62244207 62245128 -137385022 - L1MEc LINE L1 -4040 2356 1507 2073 114 26 10 chr5 62245128 62245434 -137384716 - AluSp SINE Alu -2 311 1 3485 246 109 32 chr5 62245434 62246670 -137383480 - L1MEc LINE L1 -4889 1507 37 282 346 103 26 chr5 62246842 62246998 -137383152 + L3 LINE CR1 1322 1489 -88 203 333 32 39 chr5 62247243 62247395 -137382755 - MIR SINE MIR -62 146 3 1027 198 0 12 chr5 62248186 62248353 -137381797 + FRAM SINE Alu 2 166 0 201 242 16 16 chr5 62248442 62248504 -137381646 + CT-rich Low_complexity Low_complexity 1 62 0 898 193 98 46 chr5 62248790 62249075 -137381075 - MER113 DNA MER1_type? -98 423 124 183 298 0 0 chr5 62249473 62249520 -137380630 + L3 LINE CR1 1523 1569 -8 186 286 18 0 chr5 62249957 62250013 -137380137 + MIR SINE MIR 11 67 -195 210 320 177 27 chr5 62250169 62250316 -137379834 - MER91A DNA MER1_type -27 169 1 393 374 40 4 chr5 62250353 62250580 -137379570 - L2 LINE L2 -602 2712 2478 259 313 188 0 chr5 62250884 62251012 -137379138 + MER5B DNA MER1_type 27 178 0 * 301 322 164 12 chr5 62251012 62251176 -137378974 + MIR SINE MIR 15 204 -58 336 227 113 21 chr5 62251373 62251470 -137378680 - MIR SINE MIR -122 140 35 2267 147 56 0 chr5 62252010 62252384 -137377766 - MSTB LTR MaLR 0 426 32 22 0 0 0 chr5 62252795 62252817 -137377333 + AT_rich Low_complexity Low_complexity 1 22 0 214 93 23 23 chr5 62253093 62253136 -137377014 + (GA)n Simple_repeat Simple_repeat 2 44 0 664 176 28 3 chr5 62253142 62253465 -137376685 + GA-rich Low_complexity Low_complexity 1 331 0 624 163 35 0 chr5 62253487 62253659 -137376491 + GA-rich Low_complexity Low_complexity 2 179 0 307 214 0 0 chr5 62255912 62255968 -137374182 + L2 LINE L2 3209 3264 -8 180 240 120 40 chr5 62256159 62256234 -137373916 + MIR SINE MIR 66 146 -62 213 243 71 43 chr5 62257211 62257281 -137372869 - L2 LINE L2 0 3272 3201 896 216 50 6 chr5 62257512 62257693 -137372457 + MER5A DNA MER1_type 1 189 0 387 0 0 0 chr5 62258805 62258848 -137371302 + (TG)n Simple_repeat Simple_repeat 1 43 0 29 0 0 0 chr5 62260775 62260804 -137369346 + AT_rich Low_complexity Low_complexity 1 29 0 284 320 189 0 chr5 62261963 62262116 -137368034 - MIR SINE MIR -58 204 23 1743 216 127 10 chr5 62262973 62263384 -137366766 + L1MC4 LINE L1 6461 6919 -1123 403 310 18 0 chr5 62263832 62263945 -137366205 + MIR3 SINE MIR 60 174 -34 21 0 0 0 chr5 62264423 62264444 -137365706 + AT_rich Low_complexity Low_complexity 1 21 0 210 271 34 0 chr5 62264552 62264611 -137365539 + MIR SINE MIR 164 224 -38 2015 246 108 79 chr5 62264622 62265960 -137364190 + L1MC4 LINE L1 6515 7885 -110 1502 201 110 38 chr5 62265961 62266360 -137363790 + MLT1D LTR MaLR 37 464 -41 4612 166 54 21 chr5 62266659 62267515 -137362635 + MER54A LTR ERVL 1 884 -17 250 235 168 8 chr5 62267530 62267649 -137362501 + LTR33 LTR ERVL 112 249 -272 257 259 157 28 chr5 62267692 62267800 -137362350 + MER5A DNA MER1_type 3 124 -65 561 236 104 7 chr5 62267811 62267955 -137362195 + LTR33 LTR ERVL 254 411 -110 2976 176 84 3 chr5 62268183 62268751 -137361399 - MER90 LTR ERV1 0 614 1 419 305 26 32 chr5 62268781 62268935 -137361215 + MER5A DNA MER1_type 35 187 -2 245 286 0 0 chr5 62269251 62269314 -137360836 + GA-rich Low_complexity Low_complexity 2 64 0 2438 82 0 0 chr5 62269488 62269793 -137360357 - AluY SINE Alu -6 305 1 278 115 19 0 chr5 62270417 62270469 -137359681 + CT-rich Low_complexity Low_complexity 2 54 0 432 0 0 0 chr5 62270782 62270830 -137359320 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 2204 122 0 0 chr5 62271227 62271523 -137358627 - AluSc SINE Alu -13 296 1 621 281 98 9 chr5 62271635 62272028 -137358122 - L1MEc LINE L1 -3656 2559 2173 260 279 0 0 chr5 62272070 62272149 -137358001 - L1MEc LINE L1 -4997 1208 1130 725 335 16 38 chr5 62272150 62272520 -137357630 + ERVL LTR ERVL 4827 5188 -576 2195 194 35 23 chr5 62272676 62273103 -137357047 - Tigger2a DNA MER2_type 0 434 3 1130 328 32 5 chr5 62273307 62273707 -137356443 + LTR16A LTR ERVL 25 435 -15 861 339 69 28 chr5 62273796 62274374 -137355776 - L1MEc LINE L1 -5415 790 189 562 278 38 15 chr5 62274618 62274751 -137355399 + L2 LINE L2 3137 3272 0 246 276 127 37 chr5 62274911 62275045 -137355105 - L2 LINE L2 -9 3304 3159 438 274 18 0 chr5 62275056 62275169 -137354981 - MER94 DNA DNA 0 134 20 569 329 180 12 chr5 62275331 62275820 -137354330 - L2 LINE L2 -339 2975 2405 524 282 117 5 chr5 62275991 62276179 -137353971 - MLT1L LTR MaLR -2 613 405 405 0 0 0 chr5 62278459 62278504 -137351646 + (TG)n Simple_repeat Simple_repeat 1 45 0 2492 147 7 5 chr5 62278688 62279095 -137351055 - L1MA4 LINE L1 -1 6299 5892 735 288 98 4 chr5 62279095 62279359 -137350791 - MLT1J2 LTR MaLR -161 289 1 2447 218 44 13 chr5 62279684 62280208 -137349942 - MLT1F LTR MaLR -2 540 1 258 118 0 78 chr5 62280464 62280515 -137349635 + L2 LINE L2 3267 3313 0 245 284 98 19 chr5 62280503 62280653 -137349497 + MIR SINE MIR 7 166 -62 * 1173 221 66 21 chr5 62281125 62281733 -137348417 - L1ME1 LINE L1 -18 6408 5670 1574 184 18 104 chr5 62281738 62282227 -137347923 - L1ME1 LINE L1 -795 5611 5165 999 232 11 17 chr5 62282218 62282572 -137347578 - L1ME1 LINE L1 -1867 4539 4110 * 4915 96 0 2 chr5 62282587 62283222 -137346928 + L1PA14 LINE L1 5511 6144 -17 2452 247 112 32 chr5 62283286 62284295 -137345855 - L1ME1 LINE L1 -3083 3323 2397 2371 84 0 3 chr5 62284295 62284591 -137345559 - AluY SINE Alu -16 295 1 2452 247 112 32 chr5 62284591 62285934 -137344216 - L1ME1 LINE L1 -4009 2397 775 410 121 0 61 chr5 62287107 62287173 -137342977 - MLT1G LTR MaLR -305 285 224 463 264 163 41 chr5 62287848 62288094 -137342056 + MLT1K LTR MaLR 203 478 -110 383 392 102 24 chr5 62288270 62288693 -137341457 + L2 LINE L2 2813 3268 -4 1026 247 58 89 chr5 62288846 62289239 -137340911 + MLT1J1 LTR MaLR 66 446 0 474 339 6 18 chr5 62290230 62290401 -137339749 - MER5A DNA MER1_type -15 174 6 327 377 73 15 chr5 62290420 62290693 -137339457 + L2 LINE L2 2689 2977 -337 211 256 195 12 chr5 62292010 62292092 -137338058 - MIR3 SINE MIR -23 185 89 923 285 146 25 chr5 62293051 62293524 -137336626 - LTR67 LTR ERVL -2 555 26 2200 126 131 50 chr5 62293994 62294390 -137335760 + MSTA LTR MaLR 1 428 0 2069 118 46 82 chr5 62294395 62294784 -137335366 + THE1C LTR MaLR 1 375 0 1512 305 33 46 chr5 62294819 62295508 -137334642 - ERVL LTR ERVL -474 5290 4611 273 344 8 23 chr5 62295567 62295698 -137334452 - ERVL LTR ERVL -5140 624 496 712 365 68 22 chr5 62296039 62296538 -137333612 - LTR67 LTR ERVL 0 557 36 346 271 145 48 chr5 62297051 62297258 -137332892 + MLT1K LTR MaLR 17 243 -345 338 263 69 103 chr5 62297337 62297569 -137332581 + MLT1K LTR MaLR 364 587 -1 428 228 27 74 chr5 62398170 62398319 -137231831 + L2 LINE L2 3169 3310 -3 2394 99 0 6 chr5 62398793 62399105 -137231045 - AluSg SINE Alu 0 310 1 3662 264 90 35 chr5 62399758 62401381 -137228769 + HAL1 LINE L1 649 2360 -147 559 172 26 17 chr5 62405207 62405323 -137224827 + L1MB8 LINE L1 6059 6175 -3 2923 13 0 0 chr5 62405407 62405725 -137224425 - AluYb8 SINE Alu 0 318 1 21 0 0 0 chr5 62405776 62405797 -137224353 + AT_rich Low_complexity Low_complexity 1 21 0 359 254 76 8 chr5 62405901 62406019 -137224131 + MIR SINE MIR 40 165 -97 287 139 0 0 chr5 62406096 62406139 -137224011 - MER5B DNA MER1_type -135 43 1 326 344 0 0 chr5 62406697 62406793 -137223357 + MIR3 SINE MIR 110 205 -3 372 273 23 8 chr5 62407208 62407336 -137222814 - MIR SINE MIR -36 226 97 345 244 213 30 chr5 62407334 62407498 -137222652 - L2 LINE L2 -1 3312 3119 * 260 269 128 0 chr5 62407489 62407567 -137222583 - MIR SINE MIR -130 132 45 * 21 57 0 0 chr5 62409268 62409303 -137220847 + AT_rich Low_complexity Low_complexity 1 35 0 473 292 120 36 chr5 62409884 62410185 -137219965 - LTR16A LTR ERVL -106 344 19 692 198 0 9 chr5 62410943 62411095 -137219055 - FLAM_A SINE Alu 0 152 2 180 0 0 0 chr5 62411687 62411707 -137218443 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 449 228 264 0 chr5 62411808 62411975 -137218175 - MIR SINE MIR -48 214 4 369 339 48 13 chr5 62413172 62413402 -137216748 - MER102a DNA MER1_type 0 330 93 748 241 121 17 chr5 62414384 62414616 -137215534 - L2 LINE L2 -341 2973 2718 1196 289 62 29 chr5 62414618 62415196 -137214954 - HAL1 LINE L1 -1281 1226 630 342 268 73 24 chr5 62415771 62415894 -137214256 + L1MD3 LINE L1 7810 7938 -57 2049 178 13 37 chr5 62416328 62416705 -137213445 - MLT1A2 LTR MaLR -3 371 4 294 262 136 0 chr5 62418106 62418209 -137211941 + MIR SINE MIR 140 256 -6 1786 173 7 7 chr5 62418305 62418612 -137211538 + AluJb SINE Alu 1 307 0 423 221 228 7 chr5 62418685 62418834 -137211316 + MIR3 SINE MIR 9 190 -18 501 231 0 54 chr5 62419790 62419920 -137210230 + MIR SINE MIR 1 123 -139 183 200 0 0 chr5 62420299 62420334 -137209816 - L2 LINE L2 -1 3312 3278 260 318 85 23 chr5 62420968 62421097 -137209053 + MIR3 SINE MIR 11 147 -61 2185 168 13 18 chr5 62421184 62421571 -137208579 - MLT1B LTR MaLR -4 386 2 1549 102 13 206 chr5 62423149 62423533 -137206617 - AluJb SINE Alu -2 310 1 2180 99 0 20 chr5 62425205 62425497 -137204653 + AluSx SINE Alu 1 286 -26 272 301 14 14 chr5 62426514 62426587 -137203563 + MIR SINE MIR 34 106 -156 316 257 10 20 chr5 62427291 62427392 -137202758 - L1MC4 LINE L1 -1329 6713 6614 481 236 34 88 chr5 62427718 62427866 -137202284 - MIR SINE MIR -63 145 6 513 273 110 0 chr5 62429305 62429459 -137200691 + LTR16C LTR ERVL 125 295 -196 3848 84 14 30 chr5 62430167 62430735 -137199415 - L1MA5A LINE L1 -4 6293 5735 639 229 104 56 chr5 62430892 62431123 -137199027 - MIR SINE MIR 0 262 21 1011 291 15 12 chr5 62431320 62431657 -137198493 - L2 LINE L2 -170 3143 2806 828 275 70 46 chr5 62431830 62432114 -137198036 - LTR16C LTR ERVL -132 359 69 1414 219 3 10 chr5 62432834 62433126 -137197024 + MER58B DNA MER1_type 52 341 0 700 309 36 40 chr5 62433617 62433869 -137196281 + MIR SINE MIR 12 262 0 207 216 118 0 chr5 62434380 62434431 -137195719 - L2 LINE L2 -68 3204 3148 2372 90 0 0 chr5 62435229 62435530 -137194620 + AluY SINE Alu 1 301 -10 219 69 0 0 chr5 62435551 62435580 -137194570 + (TG)n Simple_repeat Simple_repeat 1 29 0 478 284 92 26 chr5 62438076 62438305 -137191845 - MLT1J LTR MaLR 0 511 268 250 303 0 0 chr5 62438329 62438395 -137191755 - ERVL LTR ERVL -3192 2572 2507 27 29 0 0 chr5 62438397 62438431 -137191719 + AT_rich Low_complexity Low_complexity 1 34 0 3835 314 59 27 chr5 62438442 62440321 -137189829 - ERVL LTR ERVL -3261 2503 435 1448 254 35 123 chr5 62440742 62441588 -137188562 - LTR41 LTR ERVL -1 772 1 248 321 96 31 chr5 62442594 62442823 -137187327 - MIR SINE MIR -13 249 5 536 310 106 25 chr5 62442888 62443309 -137186841 - MLT1J2 LTR MaLR -5 441 1 24 32 0 0 chr5 62443560 62443591 -137186559 + AT_rich Low_complexity Low_complexity 1 31 0 12439 168 26 20 chr5 62444343 62445794 -137184356 + L1MA2 LINE L1 13 1483 -6082 7723 41 3 0 chr5 62445794 62446837 -137183313 - L1PA7 LINE L1 -4 6150 5104 12439 168 26 20 chr5 62446837 62447574 -137182576 + L1MA2 LINE L1 1483 2214 -5351 932 129 7 0 chr5 62447588 62447727 -137182423 - L1 LINE L1 -2012 4134 3995 * 2794 164 12 14 chr5 62447725 62448243 -137181907 + L1MA2 LINE L1 5995 6511 -1054 2268 132 0 0 chr5 62448243 62448570 -137181580 + L1MA2 LINE L1 7397 7723 0 647 251 48 6 chr5 62449185 62449352 -137180798 + MIR3 SINE MIR 27 200 -8 455 332 53 20 chr5 62449560 62449804 -137180346 + MIR SINE MIR 11 262 0 21 82 0 0 chr5 62449900 62449949 -137180201 + AT_rich Low_complexity Low_complexity 1 49 0 366 234 37 75 chr5 62450267 62450374 -137179776 - MER94 DNA DNA -13 121 19 1344 298 92 54 chr5 62450689 62451771 -137178379 - L2 LINE L2 -49 3264 2140 222 118 0 0 chr5 62451779 62451813 -137178337 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 226 288 116 30 chr5 62451894 62452127 -137178023 - L2 LINE L2 -1185 2129 1877 2163 108 7 3 chr5 62452223 62452518 -137177632 + AluSx SINE Alu 5 300 -12 399 276 44 66 chr5 62452868 62453049 -137177101 - MIR SINE MIR -65 197 21 1473 183 17 28 chr5 62453213 62453503 -137176647 - AluJb SINE Alu -25 287 1 216 0 0 0 chr5 62454421 62454445 -137175705 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 195 162 0 0 chr5 62454510 62454547 -137175603 + (TG)n Simple_repeat Simple_repeat 1 37 0 278 250 62 10 chr5 62454925 62455021 -137175129 + MER115 DNA AcHobo 474 574 -119 269 291 37 60 chr5 62455114 62455248 -137174902 + MIR3 SINE MIR 39 169 -39 1454 188 15 31 chr5 62456255 62456580 -137173570 - MER33 DNA MER1_type -4 320 1 261 0 0 0 chr5 62457315 62457344 -137172806 + (CAGG)n Simple_repeat Simple_repeat 3 31 0 201 228 139 40 chr5 62457887 62457988 -137172162 + MIR SINE MIR 66 176 -86 925 141 6 6 chr5 62460904 62461074 -137169076 + C-rich Low_complexity Low_complexity 4 173 0 231 61 0 0 chr5 62461401 62461434 -137168716 + (TG)n Simple_repeat Simple_repeat 2 34 0 492 329 0 7 chr5 62461438 62461590 -137168560 - MIR3 SINE MIR -9 199 49 29 104 0 0 chr5 62462011 62462117 -137168033 + AT_rich Low_complexity Low_complexity 1 106 0 512 268 45 56 chr5 62464284 62464463 -137165687 + MLT1J LTR MaLR 1 177 -334 269 284 52 52 chr5 62464583 62464699 -137165451 + MIR3 SINE MIR 6 121 -87 * 276 239 18 73 chr5 62464697 62464806 -137165344 + MIR SINE MIR 89 191 -71 2371 60 0 0 chr5 62466890 62467213 -137162937 - AluY SINE Alu 0 323 1 256 280 13 40 chr5 62468008 62468083 -137162067 + MIR3 SINE MIR 115 187 -21 25 0 0 0 chr5 62468098 62468123 -137162027 + AT_rich Low_complexity Low_complexity 1 25 0 306 345 60 0 chr5 62470434 62470550 -137159600 + MIR3 SINE MIR 44 166 -42 536 257 73 19 chr5 62470927 62471133 -137159017 - L2 LINE L2 -1400 1914 1698 228 233 156 44 chr5 62471296 62471386 -137158764 - MIR3 SINE MIR -15 193 94 370 279 63 93 chr5 62471392 62471661 -137158489 + MIR SINE MIR 2 262 0 3979 110 21 2 chr5 62472250 62472346 -137157804 + L1P5 LINE L1 5084 5177 -974 180 0 0 0 chr5 62472346 62472366 -137157784 + (TAA)n Simple_repeat Simple_repeat 2 21 0 3979 110 21 2 chr5 62472366 62472966 -137157184 + L1P5 LINE L1 5177 5792 -359 201 147 0 0 chr5 62472966 62473000 -137157150 + (TA)n Simple_repeat Simple_repeat 2 35 0 237 174 0 0 chr5 62473000 62473046 -137157104 - LTR66 LTR ERVL -171 439 394 2606 72 3 54 chr5 62473060 62473142 -137157008 + L1PB1 LINE L1 5783 5868 -283 1961 128 22 0 chr5 62473142 62473452 -137156698 - AluSx SINE Alu 0 319 4 2606 72 3 54 chr5 62473452 62473757 -137156393 + L1PB1 LINE L1 5868 6151 0 1848 155 0 67 chr5 62475400 62475729 -137154421 + AluSx SINE Alu 1 307 -5 2244 152 126 87 chr5 62476588 62477080 -137153070 - MLT2B2 LTR ERVL -4 511 1 423 330 121 46 chr5 62477117 62477372 -137152778 - L2 LINE L2 -1037 2277 2043 2049 119 18 0 chr5 62477372 62477678 -137152472 + AluSx SINE Alu 1 311 0 423 330 121 46 chr5 62477678 62478073 -137152077 - L2 LINE L2 -1271 2043 1577 197 0 0 67 chr5 62478219 62478249 -137151901 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 226 212 42 127 chr5 62479559 62479677 -137150473 + L3b LINE CR1 1289 1396 -187 184 259 0 37 chr5 62481444 62481498 -137148652 - L2 LINE L2 -96 3217 3166 21 36 0 0 chr5 62481752 62481780 -137148370 + AT_rich Low_complexity Low_complexity 1 28 0 331 276 104 18 chr5 62481851 62482014 -137148136 + L1ME4a LINE L1 5267 5443 -678 230 326 43 0 chr5 62482152 62482244 -137147906 + L1ME4a LINE L1 5525 5620 -501 233 125 0 21 chr5 62482318 62482366 -137147784 + (GGAA)n Simple_repeat Simple_repeat 2 48 0 734 242 189 38 chr5 62482493 62482889 -137147261 + L1ME4a LINE L1 5601 6056 -65 2288 97 3 0 chr5 62485053 62485341 -137144809 + AluSp SINE Alu 1 289 -24 227 246 101 0 chr5 62485685 62485754 -137144396 - MIR SINE MIR -81 181 106 202 289 0 0 chr5 62486984 62487029 -137143121 + (CATG)n Simple_repeat Simple_repeat 3 47 0 827 127 62 22 chr5 62487369 62487633 -137142517 - MER61A LTR ERV1 0 343 1 20076 91 22 30 chr5 62487633 62490496 -137139654 - MER61A-int LTR ERV1 0 5217 2376 36089 68 5 3 chr5 62490498 62494972 -137135178 + HERVL-A1 LTR ERVL 1171 5654 0 2592 99 35 8 chr5 62494972 62495345 -137134805 + MLT2A1 LTR ERVL 1 383 -61 206 62 31 78 chr5 62495345 62495409 -137134741 + (TTAA)n Simple_repeat Simple_repeat 4 64 0 309 88 246 0 chr5 62495418 62495475 -137134675 + MLT2A1 LTR ERVL 383 453 0 302 179 0 0 chr5 62495483 62495539 -137134611 + L1MC4 LINE L1 6648 6703 -1339 297 0 0 0 chr5 62495539 62495572 -137134578 + (TA)n Simple_repeat Simple_repeat 2 34 0 1390 135 0 0 chr5 62495572 62495779 -137134371 - L1P5 LINE L1 -365 5791 5585 390 307 66 24 chr5 62495860 62496026 -137134124 + MIR SINE MIR 34 206 -56 187 353 102 30 chr5 62496058 62496225 -137133925 + L2 LINE L2 2886 3064 -208 254 258 0 0 chr5 62497368 62497430 -137132720 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 251 310 0 0 chr5 62497572 62497643 -137132507 + L2 LINE L2 3202 3272 0 543 257 105 12 chr5 62498051 62498222 -137131928 + MIR SINE MIR 62 248 -14 2029 189 28 21 chr5 62498282 62498744 -137131406 - MLT2D LTR ERVL 0 464 6 440 333 42 12 chr5 62498773 62498941 -137131209 + L2 LINE L2 2606 2778 -536 427 195 35 11 chr5 62499048 62499135 -137131015 - MLT1J2 LTR MaLR 0 450 362 1057 260 161 17 chr5 62499136 62499490 -137130660 + MLT1E LTR MaLR 3 407 -186 1149 191 47 0 chr5 62499504 62499739 -137130411 + AluJb SINE Alu 66 311 -1 224 111 28 0 chr5 62501553 62501589 -137128561 + MIR SINE MIR 106 142 -120 2657 140 43 10 chr5 62502177 62502591 -137127559 - MSTA LTR MaLR 0 428 1 184 135 135 0 chr5 62503008 62503045 -137127105 + L3b LINE CR1 1323 1364 -219 * 238 274 162 34 chr5 62503044 62503161 -137126989 - L2 LINE L2 0 3272 3141 206 31 0 31 chr5 62503852 62503884 -137126266 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 401 230 22 65 chr5 62503985 62504124 -137126026 - L1MC5 LINE L1 -48 7913 7781 280 353 71 74 chr5 62504520 62504968 -137125182 + L2 LINE L2 2826 3272 0 495 310 92 14 chr5 62505039 62505181 -137124969 - MER91A DNA MER1_type -26 170 18 394 295 147 19 chr5 62505213 62505369 -137124781 - MER5B DNA MER1_type 0 178 3 296 324 47 30 chr5 62505629 62505810 -137124340 + MIR SINE MIR 30 211 -51 312 345 47 34 chr5 62506825 62506973 -137123177 + MIR SINE MIR 81 230 -32 517 272 54 67 chr5 62507063 62507287 -137122863 + MIR SINE MIR 1 221 -41 742 262 188 65 chr5 62508113 62508655 -137121495 - MLT1L LTR MaLR -4 611 3 517 260 62 0 chr5 62508751 62508897 -137121253 + L1MEc LINE L1 50 204 -6192 480 176 104 16 chr5 62508898 62509023 -137121127 + L1MEc LINE L1 961 1096 -5300 2003 266 42 31 chr5 62509033 62509811 -137120339 + L1MEc LINE L1 1269 2055 -4341 333 351 8 8 chr5 62509816 62509947 -137120203 + HERVL LTR ERVL 4259 4389 -1265 6339 155 25 48 chr5 62510070 62511005 -137119145 - L1MA4 LINE L1 -13 6469 5515 16513 39 3 2 chr5 62511005 62513670 -137116480 + L1PA4 LINE L1 3488 6155 0 6339 155 25 48 chr5 62513670 62514882 -137115268 - L1MA4 LINE L1 -967 5515 4325 4398 154 25 15 chr5 62514877 62515596 -137114554 - L1MA4 LINE L1 -4593 735 10 * 619 320 74 11 chr5 62515805 62516074 -137114076 + HERVL LTR ERVL 4782 5067 -418 871 293 88 34 chr5 62516457 62516846 -137113304 + LTR16A LTR ERVL 1 409 -41 2438 152 53 68 chr5 62517576 62517879 -137112271 - L1MD3 LINE L1 -3 7992 7699 369 0 0 0 chr5 62517879 62517920 -137112230 + (TG)n Simple_repeat Simple_repeat 1 41 0 2438 152 53 68 chr5 62517920 62518148 -137112002 - L1MD3 LINE L1 -296 7699 7469 352 250 34 0 chr5 62518179 62518267 -137111883 - MLT1F1 LTR MaLR -442 125 35 2497 55 0 3 chr5 62520778 62521071 -137109079 + AluY SINE Alu 1 292 -19 277 217 108 0 chr5 62521820 62521903 -137108247 + L2 LINE L2 3154 3245 -27 973 214 52 24 chr5 62522155 62522407 -137107743 + MIR SINE MIR 2 260 -2 200 302 114 47 chr5 62522570 62522719 -137107431 + L2 LINE L2 2608 2766 -548 5087 130 45 93 chr5 62522740 62523652 -137106498 + L1MC3 LINE L1 6743 7595 -190 2045 117 7 3 chr5 62523652 62523934 -137106216 + AluSx SINE Alu 1 283 -29 5087 130 45 93 chr5 62523934 62524117 -137106033 + L1MC3 LINE L1 7595 7785 0 370 294 84 18 chr5 62524329 62524548 -137105602 + MIR SINE MIR 18 251 -11 240 306 0 0 chr5 62525958 62526030 -137104120 - MIR SINE MIR -5 257 186 260 364 71 31 chr5 62527239 62527563 -137102587 - L2 LINE L2 -556 2758 2422 2211 114 10 0 chr5 62528699 62528989 -137101161 + AluSg SINE Alu 1 293 -17 1824 240 21 6 chr5 62529270 62529737 -137100413 + MER119 DNA MER1_type 104 577 -6 266 309 64 54 chr5 62529929 62530133 -137100017 - L2 LINE L2 -240 3032 2827 2110 134 57 20 chr5 62530137 62530488 -137099662 + THE1B LTR MaLR 1 364 0 9842 93 8 7 chr5 62530488 62531881 -137098269 + THE1B-int LTR MaLR 1 1395 -185 1848 127 13 26 chr5 62531882 62532190 -137097960 + THE1B LTR MaLR 61 364 0 214 327 179 34 chr5 62532520 62532899 -137097251 - L2 LINE L2 -1042 2272 1839 1953 230 84 29 chr5 62533478 62534707 -137095443 + L1MC4 LINE L1 6461 7902 -140 1772 100 32 0 chr5 62534773 62535022 -137095128 + L1PA10 LINE L1 5910 6166 -2 407 163 0 12 chr5 62535856 62535942 -137094208 + GA-rich Low_complexity Low_complexity 4 88 0 309 249 65 22 chr5 62535949 62536134 -137094016 + L1ME3A LINE L1 5775 5967 -203 950 235 50 98 chr5 62536245 62536747 -137093403 - MLT1H LTR MaLR 0 549 72 1810 205 87 8 chr5 62538323 62538805 -137091345 - L1ME1 LINE L1 -5 6161 5642 16237 116 21 21 chr5 62538806 62541476 -137088674 + Tigger4(Zombi) DNA MER2_type 1 2671 -60 259 177 0 38 chr5 62541761 62541840 -137088310 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 356 299 175 0 chr5 62541866 62542003 -137088147 - MER5A DNA MER1_type 0 189 29 727 238 50 20 chr5 62542013 62542215 -137087935 + MIR SINE MIR 34 241 -21 679 237 71 30 chr5 62543357 62543555 -137086595 + MER58A DNA MER1_type 19 224 0 740 119 0 9 chr5 62543566 62543675 -137086475 + MER5A DNA MER1_type 4 111 -78 1867 178 3 0 chr5 62543688 62543981 -137086169 + AluSx SINE Alu 5 298 -14 222 204 0 23 chr5 62543982 62544026 -137086124 + MER5A DNA MER1_type 102 144 -45 290 223 85 0 chr5 62544042 62544136 -137086014 - L1MA9 LINE L1 -31 6281 6180 331 183 28 0 chr5 62544139 62544210 -137085940 - L1MA9 LINE L1 -232 6080 6008 514 167 44 6 chr5 62544246 62544425 -137085725 - L1MA9 LINE L1 -24 6288 6006 390 200 0 0 chr5 62544425 62544490 -137085660 + MER5A DNA MER1_type 125 189 0 338 107 18 0 chr5 62544812 62544868 -137085282 + (TA)n Simple_repeat Simple_repeat 2 58 0 1641 203 0 0 chr5 62544868 62545228 -137084922 - L1P LINE L1 -3025 3121 2762 617 195 30 85 chr5 62545321 62545485 -137084665 + MER58B DNA MER1_type 172 326 -15 930 225 11 0 chr5 62546095 62546282 -137083868 - MER5A DNA MER1_type 0 189 1 312 304 67 8 chr5 62546672 62546912 -137083238 - L1M4 LINE L1 -1221 4925 4672 261 163 0 0 chr5 62547840 62547889 -137082261 + A-rich Low_complexity Low_complexity 1 49 0 370 268 65 24 chr5 62547936 62548104 -137082046 - MER104 DNA Tc2 -4 176 2 1751 185 32 20 chr5 62548497 62548903 -137081247 - LTR52 LTR ERVL 0 421 11 552 206 144 6 chr5 62548916 62549076 -137081074 - MER3 DNA MER1_type -27 182 1 1480 205 50 0 chr5 62549087 62549404 -137080746 + MER58B DNA MER1_type 9 341 0 206 290 0 16 chr5 62549871 62549933 -137080217 + CT-rich Low_complexity Low_complexity 2 62 0 1281 177 25 8 chr5 62550001 62550244 -137079906 + MSTB LTR MaLR 180 426 0 5164 165 28 44 chr5 62550340 62551517 -137078633 - L1MC1 LINE L1 0 6613 5456 470 221 64 15 chr5 62551577 62551781 -137078369 + L1M4 LINE L1 4250 4463 -1683 9212 190 67 30 chr5 62551790 62552757 -137077393 - L1MC1 LINE L1 -1072 5354 4425 2622 137 16 14 chr5 62552757 62553188 -137076962 - MSTB1 LTR MaLR 0 432 1 9212 190 67 30 chr5 62553188 62556406 -137073744 - L1MC1 LINE L1 -2001 4425 1329 1452 223 53 48 chr5 62556406 62556800 -137073350 - MSTD LTR MaLR 0 396 1 5805 228 45 83 chr5 62556804 62558602 -137071548 - MSTD-int LTR MaLR -4 1731 2 1775 208 28 10 chr5 62558604 62558993 -137071157 - MSTD LTR MaLR 0 396 1 9212 190 67 30 chr5 62558993 62559868 -137070282 - L1MC1 LINE L1 -5099 1327 95 183 42 0 0 chr5 62562150 62562174 -137067976 + (CAA)n Simple_repeat Simple_repeat 3 26 0 283 274 77 113 chr5 62562329 62562665 -137067485 + L1ME1 LINE L1 264 587 -5836 2122 248 60 41 chr5 62562722 62564066 -137066084 + L1ME1 LINE L1 816 2204 -4737 2905 231 87 31 chr5 62564279 62565446 -137064704 + L1ME1 LINE L1 4717 5949 -992 1260 221 74 25 chr5 62565444 62565851 -137064299 + L1ME1 LINE L1 6517 6943 -18 * 1176 205 39 3 chr5 62566006 62566318 -137063832 + MER33 DNA MER1_type 2 324 0 2534 108 11 6 chr5 62566531 62566893 -137063257 - THE1B LTR MaLR 0 364 1 281 330 61 0 chr5 62567066 62567181 -137062969 - MIR3 SINE MIR -50 158 37 2609 83 3 25 chr5 62567566 62567929 -137062221 - THE1A LTR MaLR 0 355 1 189 241 86 35 chr5 62568562 62568620 -137061530 - L3 LINE CR1 -1144 433 373 373 244 113 48 chr5 62569283 62569451 -137060699 - MIR SINE MIR -77 185 7 270 287 20 20 chr5 62569522 62569623 -137060527 + MIR3 SINE MIR 93 193 -15 745 102 0 16 chr5 62570195 62570323 -137059827 + (TTCC)n Simple_repeat Simple_repeat 3 128 0 389 290 134 63 chr5 62573738 62574104 -137056046 - L1ME4a LINE L1 -18 6103 5712 499 206 11 0 chr5 62574626 62574718 -137055432 - MER81 DNA DNA -21 93 1 359 264 0 11 chr5 62576587 62576678 -137053472 + MIR3 SINE MIR 89 178 -30 247 304 0 0 chr5 62577157 62577249 -137052901 - HAL1 LINE L1 -961 1546 1455 24 0 0 0 chr5 62577326 62577350 -137052800 + AT_rich Low_complexity Low_complexity 1 24 0 229 170 85 0 chr5 62577507 62577554 -137052596 - L1MEd LINE L1 -5746 373 323 2429 196 125 4 chr5 62577634 62578129 -137052021 + MLT1F1 LTR MaLR 1 555 -12 367 287 23 16 chr5 62578177 62578306 -137051844 - L1MEd LINE L1 -5988 131 2 386 338 50 7 chr5 62578347 62578486 -137051664 - MIR SINE MIR -96 166 22 572 226 63 13 chr5 62578966 62579125 -137051025 + MIR SINE MIR 92 258 -4 304 342 51 32 chr5 62579658 62579816 -137050334 - L2 LINE L2 0 3272 3112 231 294 75 75 chr5 62580087 62580379 -137049771 + L2 LINE L2 2483 2774 -540 691 315 107 35 chr5 62580902 62580987 -137049163 + L2 LINE L2 2716 2793 -520 2246 113 0 28 chr5 62580987 62581307 -137048843 + AluSx SINE Alu 1 311 -1 691 315 107 35 chr5 62581307 62581757 -137048393 + L2 LINE L2 2793 3298 -15 536 272 28 91 chr5 62581999 62582253 -137047897 - MER102a DNA MER1_type -1 329 92 22 0 0 0 chr5 62582895 62582917 -137047233 + AT_rich Low_complexity Low_complexity 1 22 0 1102 290 53 33 chr5 62583085 62583575 -137046575 - L1MC4a LINE L1 -1889 5919 5420 21 0 0 0 chr5 62583575 62583596 -137046554 + AT_rich Low_complexity Low_complexity 1 21 0 5549 149 40 15 chr5 62583741 62584742 -137045408 - L1MC2 LINE L1 -127 6217 5193 417 176 25 59 chr5 62584733 62584852 -137045298 - L1MC4a LINE L1 -2367 5441 5327 * 506 242 91 48 chr5 62586597 62586783 -137043367 + MIR SINE MIR 67 260 -2 209 273 15 15 chr5 62588547 62588613 -137041537 + CT-rich Low_complexity Low_complexity 3 68 0 248 172 17 0 chr5 62589088 62589146 -137041004 + CT-rich Low_complexity Low_complexity 2 60 0 1471 116 42 0 chr5 62589162 62589377 -137040773 - AluSg/x SINE Alu -2 308 85 1985 129 0 0 chr5 62589380 62589684 -137040466 - AluSx SINE Alu 0 308 5 578 282 12 6 chr5 62589759 62589929 -137040221 + MIR SINE MIR 89 259 -3 566 245 86 86 chr5 62589956 62590131 -137040019 + MIR SINE MIR 2 179 -83 2798 183 6 15 chr5 62590131 62590611 -137039539 + MER66A LTR ERV1 1 476 -2 566 245 86 86 chr5 62590611 62590692 -137039458 + MIR SINE MIR 178 258 -4 192 313 62 0 chr5 62591093 62591157 -137038993 + L2 LINE L2 2978 3045 -227 423 213 25 8 chr5 62592162 62592284 -137037866 - L1MC4 LINE L1 -1 8041 7918 253 287 0 23 chr5 62592342 62592429 -137037721 - L1MC4 LINE L1 -152 7890 7806 212 255 19 75 chr5 62592891 62592997 -137037153 + L2 LINE L2 2962 3061 -211 861 265 30 0 chr5 62595866 62596096 -137034054 + MIR SINE MIR 16 252 -10 195 268 170 18 chr5 62596433 62596545 -137033605 - L2 LINE L2 -285 2987 2859 180 321 107 23 chr5 62596624 62596755 -137033395 - L2 LINE L2 -652 2662 2521 903 292 72 41 chr5 62597289 62597704 -137032446 - L2 LINE L2 -1 3312 2885 329 318 47 47 chr5 62598369 62598517 -137031633 + MLT1H LTR MaLR 114 261 -288 493 291 66 16 chr5 62601161 62601343 -137028807 - MIR SINE MIR -25 237 47 231 284 0 30 chr5 62601689 62601756 -137028394 + L2 LINE L2 3249 3313 0 350 320 48 0 chr5 62603037 62603184 -137026966 - MARNA DNA Mariner -390 196 43 22 56 0 0 chr5 62603329 62603365 -137026785 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5 62603437 62603473 -137026677 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr5 62603642 62603677 -137026473 + AT_rich Low_complexity Low_complexity 1 35 0 297 284 25 13 chr5 62605721 62606035 -137024115 - L1M4 LINE L1 -1488 4658 4279 478 326 125 27 chr5 62606069 62606397 -137023753 + MLT1I LTR MaLR 50 409 0 225 329 0 0 chr5 62606397 62606482 -137023668 - L1M4 LINE L1 -1885 4261 4177 349 273 76 15 chr5 62608394 62608526 -137021624 - MER91C DNA MER1_type 0 140 1 216 362 11 21 chr5 62608570 62608664 -137021486 + MIR SINE MIR 20 112 -150 6963 62 12 86 chr5 62608990 62610294 -137019856 + L1PA8 LINE L1 4925 6170 -2 414 149 27 14 chr5 62661250 62661324 -136968826 - Charlie4a DNA MER1_type -3 505 431 894 164 0 0 chr5 62661324 62661458 -136968692 - AluJo SINE Alu -178 134 1 703 187 162 43 chr5 62661463 62661630 -136968520 - Charlie4a DNA MER1_type -1525 436 290 2369 90 0 3 chr5 62661630 62661931 -136968219 - AluSx SINE Alu -12 300 1 703 187 162 43 chr5 62661931 62662041 -136968109 - Charlie4a DNA MER1_type -1671 290 126 2195 148 36 44 chr5 62662792 62663019 -136967131 + MLT2D LTR ERVL 1 228 -186 2286 107 7 3 chr5 62663019 62663328 -136966822 - AluSp SINE Alu -3 310 1 2195 148 36 44 chr5 62663328 62663467 -136966683 + MLT2D LTR ERVL 228 366 -48 297 0 0 0 chr5 62663467 62663500 -136966650 + (CAAT)n Simple_repeat Simple_repeat 2 34 0 2195 148 36 44 chr5 62663500 62663543 -136966607 + MLT2D LTR ERVL 366 408 -6 638 214 299 48 chr5 62663530 62663801 -136966349 - MLT1D LTR MaLR -166 339 1 * 2337 97 7 0 chr5 62664280 62664579 -136965571 + AluSq SINE Alu 1 301 -12 1534 108 0 0 chr5 62665756 62665959 -136964191 + AluY SINE Alu 88 290 -21 25 0 0 0 chr5 62666035 62666060 -136964090 + AT_rich Low_complexity Low_complexity 1 25 0 2313 101 0 0 chr5 62666112 62666408 -136963742 + AluSx SINE Alu 1 296 -16 495 0 0 0 chr5 62666705 62666760 -136963390 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 1995 142 0 16 chr5 62667153 62667469 -136962681 + AluJo SINE Alu 1 311 -1 411 283 144 0 chr5 62667475 62667655 -136962495 + MIR SINE MIR 47 252 -10 729 237 183 9 chr5 62667875 62668094 -136962056 - MIR SINE MIR 0 262 6 2593 33 7 3 chr5 62668880 62669179 -136960971 + AluY SINE Alu 1 300 -11 653 295 36 10 chr5 62669677 62669870 -136960280 + MER115 DNA AcHobo 58 255 -438 496 254 14 22 chr5 62670047 62670185 -136959965 - MER5A DNA MER1_type -1 188 52 2288 107 3 0 chr5 62671818 62672127 -136958023 + AluSx SINE Alu 1 310 -2 22 80 0 0 chr5 62672593 62672643 -136957507 + AT_rich Low_complexity Low_complexity 1 50 0 757 246 86 32 chr5 62672711 62672931 -136957219 + MIR SINE MIR 19 250 -12 273 315 43 0 chr5 62673923 62674015 -136956135 - L3b LINE CR1 -124 1459 1364 26 50 0 0 chr5 62674388 62674428 -136955722 + AT_rich Low_complexity Low_complexity 1 40 0 1090 291 170 7 chr5 62675300 62675746 -136954404 - LTR33 LTR ERVL -2 519 1 216 0 0 0 chr5 62675917 62675941 -136954209 + (TG)n Simple_repeat Simple_repeat 1 24 0 * 231 36 0 0 chr5 62675940 62675968 -136954182 + (GA)n Simple_repeat Simple_repeat 1 28 0 498 267 42 18 chr5 62676146 62676311 -136953839 + L1ME4a LINE L1 5945 6113 -8 713 257 90 0 chr5 62676311 62676533 -136953617 + L2 LINE L2 2134 2375 -939 390 231 94 83 chr5 62676715 62676992 -136953158 - L1MC4a LINE L1 -1818 5990 5711 425 315 13 34 chr5 62676992 62677230 -136952920 - L1MC4a LINE L1 -1882 5926 5694 662 285 76 43 chr5 62677253 62677599 -136952551 + MLT1J2 LTR MaLR 19 410 -36 2280 105 10 0 chr5 62677842 62678146 -136952004 - AluSq SINE Alu -6 307 1 41 87 0 0 chr5 62678152 62678256 -136951894 + AT_rich Low_complexity Low_complexity 1 104 0 447 306 37 0 chr5 62679721 62679829 -136950321 - L2 LINE L2 0 3272 3161 477 240 40 32 chr5 62679857 62679982 -136950168 + MLT1L LTR MaLR 152 277 -338 2684 38 0 13 chr5 62679982 62680297 -136949853 - AluY SINE Alu 0 311 1 684 276 65 4 chr5 62680353 62680585 -136949565 + MLT1L LTR MaLR 368 613 -2 2130 119 0 3 chr5 62680927 62681222 -136948928 - AluSg1 SINE Alu -15 294 1 419 296 136 23 chr5 62681230 62681450 -136948700 - MIR SINE MIR -8 254 10 349 247 163 39 chr5 62682284 62682462 -136947688 + LTR16A LTR ERVL 16 215 -235 405 314 119 63 chr5 62682800 62683355 -136946795 + L2 LINE L2 1913 2498 -816 1231 182 0 10 chr5 62683396 62683605 -136946545 - AluJo SINE Alu -20 292 86 214 316 158 0 chr5 62683740 62683835 -136946315 + L2 LINE L2 2712 2821 -493 194 183 11 151 chr5 62683921 62684014 -136946136 + L2 LINE L2 2942 3021 -251 1866 162 7 19 chr5 62684344 62684652 -136945498 + AluJo SINE Alu 1 304 -8 336 24 0 0 chr5 62684680 62684721 -136945429 + (CA)n Simple_repeat Simple_repeat 2 42 0 208 200 31 54 chr5 62684783 62684913 -136945237 + (TATAA)n Simple_repeat Simple_repeat 4 130 0 648 195 32 0 chr5 62686779 62686902 -136943248 - MER94 DNA DNA 0 134 8 512 290 86 35 chr5 62686937 62687376 -136942774 - LTR33 LTR ERVL 0 521 23 310 318 47 19 chr5 62687992 62688099 -136942051 - L2 LINE L2 0 3272 3163 254 272 19 87 chr5 62688327 62688430 -136941720 - L2 LINE L2 -185 3087 2992 394 326 62 17 chr5 62688560 62688738 -136941412 - MIR SINE MIR -52 210 25 3023 58 13 19 chr5 62688888 62689265 -136940885 - THE1C LTR MaLR 0 375 1 345 327 107 24 chr5 62689275 62689657 -136940493 - L2 LINE L2 -339 2975 2562 461 227 92 47 chr5 62690067 62690181 -136939969 - L1ME4a LINE L1 -122 5999 5892 1876 155 13 7 chr5 62690181 62690490 -136939660 - AluJb SINE Alu 0 312 2 461 227 92 47 chr5 62690490 62690654 -136939496 - L1ME4a LINE L1 -229 5892 5696 2334 101 0 0 chr5 62690768 62691066 -136939084 - AluSg1 SINE Alu -10 299 2 21 0 0 0 chr5 62691911 62691932 -136938218 + AT_rich Low_complexity Low_complexity 1 21 0 1019 241 25 4 chr5 62691932 62692168 -136937982 - MER20B DNA MER1_type -232 551 311 914 239 66 8 chr5 62692171 62692414 -136937736 - MER20B DNA MER1_type -417 366 110 2222 112 10 0 chr5 62692454 62692749 -136937401 + AluSx SINE Alu 1 298 -14 714 143 23 8 chr5 62692979 62693112 -136937038 - L1MB3 LINE L1 -8 6175 6041 2196 122 0 0 chr5 62693161 62693464 -136936686 - AluSc SINE Alu -6 303 1 2301 104 3 0 chr5 62693522 62693829 -136936321 - AluSg SINE Alu -2 308 1 2224 101 0 7 chr5 62695034 62695330 -136934820 + AluSq SINE Alu 1 294 -19 21 0 0 0 chr5 62695385 62695406 -136934744 + AT_rich Low_complexity Low_complexity 1 21 0 434 103 0 0 chr5 62695542 62695600 -136934550 - Alu SINE Alu -259 59 2 293 286 0 14 chr5 62695803 62695873 -136934277 + MER5B DNA MER1_type 1 69 -109 322 65 0 0 chr5 62695975 62696021 -136934129 + L1PA7 LINE L1 6105 6150 -4 1647 209 3 3 chr5 62696037 62696329 -136933821 - AluJo SINE Alu -20 292 1 2634 154 90 0 chr5 62696329 62696490 -136933660 - L1MB3 LINE L1 -200 5971 5826 180 0 0 0 chr5 62696490 62696510 -136933640 + (TA)n Simple_repeat Simple_repeat 1 20 0 2634 154 90 0 chr5 62696510 62696827 -136933323 - L1MB3 LINE L1 -345 5826 5450 7970 181 111 19 chr5 62696982 62698589 -136931561 - MER52A LTR ERV1 0 1755 1 234 281 0 12 chr5 62698755 62698837 -136931313 + L1 LINE L1 2266 2346 -3800 893 195 130 18 chr5 62698867 62699141 -136931009 + L1MC4 LINE L1 7752 7995 0 361 310 31 23 chr5 62699141 62699270 -136930880 - MER5B DNA MER1_type -48 130 1 1903 173 134 41 chr5 62699342 62699804 -136930346 + MLT1D LTR MaLR 1 505 0 1768 182 16 65 chr5 62699940 62700324 -136929826 - MLT1A1 LTR MaLR 0 365 1 363 264 0 0 chr5 62701021 62701108 -136929042 + HAL1 LINE L1 2078 2164 -343 312 227 10 21 chr5 62701137 62701234 -136928916 + HAL1b LINE L1 746 841 -507 597 238 100 38 chr5 62701321 62701633 -136928517 + HAL1b LINE L1 785 2505 -2 4296 87 5 31 chr5 62704982 62705569 -136924581 + L1PA10 LINE L1 5586 6157 -11 593 264 64 33 chr5 62705933 62706263 -136923887 + L1MC5 LINE L1 7586 7925 -36 6211 56 20 8 chr5 62706392 62707147 -136923003 - L1PA8 LINE L1 0 6172 5409 26 0 0 0 chr5 62707340 62707366 -136922784 + AT_rich Low_complexity Low_complexity 1 26 0 1621 195 237 5 chr5 62707669 62708079 -136922071 - MLT1D LTR MaLR 0 505 1 431 164 135 84 chr5 62708108 62708265 -136921885 - MLT1F1 LTR MaLR 0 582 431 284 230 185 44 chr5 62708400 62708535 -136921615 - MLT1I LTR MaLR -238 171 18 309 118 0 0 chr5 62708900 62708951 -136921199 + (CA)n Simple_repeat Simple_repeat 1 51 0 387 287 17 9 chr5 62709128 62709243 -136920907 + L2 LINE L2 3193 3308 -5 2304 100 3 0 chr5 62709373 62709674 -136920476 - AluSx SINE Alu -10 302 1 1564 220 99 63 chr5 62709995 62710500 -136919650 + MLT1F LTR MaLR 1 523 -19 180 370 65 65 chr5 62711101 62711409 -136918741 - L2 LINE L2 -20 3252 2945 321 313 61 71 chr5 62711837 62712035 -136918115 + MER91A DNA MER1_type 1 196 0 1726 151 10 33 chr5 62713724 62714028 -136916122 + AluJb SINE Alu 1 297 -15 21 0 0 0 chr5 62715175 62715196 -136914954 + AT_rich Low_complexity Low_complexity 1 21 0 1669 161 21 3 chr5 62715378 62715663 -136914487 + L1PB4 LINE L1 5867 6156 0 2140 150 0 3 chr5 62716029 62716342 -136913808 - AluSx SINE Alu 0 312 1 396 0 0 0 chr5 62716910 62716954 -136913196 + (TTG)n Simple_repeat Simple_repeat 2 45 0 24 77 0 0 chr5 62717494 62717546 -136912604 + AT_rich Low_complexity Low_complexity 1 52 0 386 283 124 64 chr5 62717777 62718123 -136912027 + MLT1J2 LTR MaLR 37 422 -6 226 226 81 0 chr5 62718648 62718710 -136911440 + MER91C DNA MER1_type 53 119 -21 190 315 27 0 chr5 62719379 62719452 -136910698 - L2 LINE L2 -47 3266 3192 468 215 0 9 chr5 62720172 62720279 -136909871 + AluSp/q SINE Alu 208 313 0 1855 172 0 40 chr5 62721656 62721981 -136908169 + AluJo SINE Alu 1 312 0 1824 99 26 7 chr5 62722147 62722420 -136907730 + L1MA5A LINE L1 6019 6296 -1 2310 102 0 0 chr5 62722785 62723069 -136907081 + AluSx SINE Alu 1 287 -25 996 35 28 7 chr5 62723069 62723213 -136906937 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 463 193 102 40 chr5 62723494 62723670 -136906480 - LTR33A LTR ERVL -335 188 2 1775 158 6 45 chr5 62724525 62724836 -136905314 - AluJb SINE Alu -13 299 1 5996 147 18 31 chr5 62724890 62725479 -136904671 - L1MA9 LINE L1 0 6312 5717 2122 147 123 23 chr5 62725479 62725868 -136904282 + MSTA LTR MaLR 1 428 0 5996 147 18 31 chr5 62725868 62726369 -136903781 - L1MA9 LINE L1 -595 5717 5247 3231 150 17 93 chr5 62726369 62726969 -136903181 + MLT2B3 LTR ERVL 1 554 0 5996 147 18 31 chr5 62726969 62727306 -136902844 - L1MA9 LINE L1 -1065 5247 4907 2546 158 26 28 chr5 62727308 62727732 -136902418 + MSTB LTR MaLR 4 426 0 8758 161 58 13 chr5 62727732 62729312 -136900838 + MSTB-int LTR MaLR 1 1651 0 2788 138 23 28 chr5 62729312 62729740 -136900410 + MSTB LTR MaLR 1 426 0 392 157 48 24 chr5 62729762 62729845 -136900305 - L1M4 LINE L1 -1232 4914 4830 1925 157 59 57 chr5 62729951 62730340 -136899810 - MLT1B LTR MaLR 0 390 1 344 70 0 18 chr5 62730526 62730583 -136899567 + (GA)n Simple_repeat Simple_repeat 1 56 0 1641 157 94 92 chr5 62731194 62731300 -136898850 + MLT2D LTR ERVL 1 105 -309 2271 119 0 3 chr5 62731300 62731611 -136898539 - AluJb SINE Alu -2 310 1 1641 157 94 92 chr5 62731611 62731658 -136898492 + MLT2D LTR ERVL 105 150 -264 3002 99 129 99 chr5 62731658 62732241 -136897909 - MER4A LTR ERV1 0 600 1 1641 157 94 92 chr5 62732241 62732467 -136897683 + MLT2D LTR ERVL 150 374 -40 186 43 0 0 chr5 62732467 62732490 -136897660 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 459 0 0 0 chr5 62732489 62732540 -136897610 + (TG)n Simple_repeat Simple_repeat 2 52 0 1641 157 94 92 chr5 62732490 62732571 -136897579 + MLT2D LTR ERVL 374 414 0 2173 127 0 3 chr5 62732679 62732978 -136897172 + AluSx SINE Alu 1 298 -14 230 167 24 0 chr5 62735720 62735762 -136894388 + MIR SINE MIR 213 255 -7 259 299 130 16 chr5 62736040 62736224 -136893926 + L1ME3 LINE L1 5342 5546 -575 788 270 84 25 chr5 62736260 62736582 -136893568 - LTR16B LTR ERVL -20 444 104 502 259 43 11 chr5 62736652 62736702 -136893448 + L1ME3 LINE L1 5559 5606 -515 2420 69 0 16 chr5 62736702 62737007 -136893143 - AluY SINE Alu -11 300 1 502 259 43 11 chr5 62737007 62737141 -136893009 + L1ME3 LINE L1 5606 5749 -372 247 303 11 34 chr5 62737144 62737233 -136892917 + MER102b DNA MER1_type 254 340 -1 319 233 39 78 chr5 62737328 62737457 -136892693 + L1ME3 LINE L1 6039 6162 0 747 267 117 67 chr5 62738239 62738658 -136891492 + MLT1L LTR MaLR 3 442 -173 699 257 55 105 chr5 62738834 62738945 -136891205 + L1MC4a LINE L1 5520 5635 -489 1692 159 37 0 chr5 62738945 62739216 -136890934 - AluJo SINE Alu -9 303 23 699 257 55 105 chr5 62739216 62739494 -136890656 + L1MC4a LINE L1 5635 5887 -237 1905 123 28 14 chr5 62739523 62739808 -136890342 + AluSx SINE Alu 1 289 -23 329 279 37 37 chr5 62740184 62740320 -136889830 - LTR67 LTR ERVL -266 291 156 993 233 15 130 chr5 62741309 62741832 -136888318 - LTR67 LTR ERVL 0 557 95 269 230 115 30 chr5 62742064 62742229 -136887921 - L1ME4a LINE L1 -4 6117 5939 1643 168 68 0 chr5 62742620 62742900 -136887250 + AluJo SINE Alu 1 299 -13 228 219 171 8 chr5 62742911 62743034 -136887116 - L1ME4a LINE L1 -844 5302 5160 574 258 211 19 chr5 62743164 62743482 -136886668 + L2 LINE L2 2366 2744 -570 899 256 96 42 chr5 62743510 62743842 -136886308 + L2 LINE L2 2963 3312 -1 264 269 184 18 chr5 62743852 62744161 -136885989 - LTR16A1 LTR ERVL 0 457 55 215 159 23 0 chr5 62744185 62744229 -136885921 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 1731 157 7 27 chr5 62745025 62745318 -136884832 - AluJb SINE Alu -25 287 1 228 280 17 59 chr5 62745335 62745453 -136884697 - L1MC4 LINE L1 -26 8016 7904 493 223 69 8 chr5 62745484 62745614 -136884536 - L1MC4 LINE L1 -124 7918 7781 396 153 14 0 chr5 62745619 62745691 -136884459 - LTR41 LTR ERVL -1 772 700 1678 149 41 30 chr5 62745691 62745986 -136884164 + AluJb SINE Alu 1 298 -14 619 206 122 23 chr5 62745996 62746127 -136884023 + FRAM SINE Alu 1 144 -32 296 24 0 24 chr5 62746135 62746177 -136883973 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 2183 92 0 42 chr5 62746209 62746515 -136883635 + AluSg SINE Alu 1 293 -17 699 212 84 11 chr5 62746975 62747154 -136882996 - LTR41 LTR ERVL -581 192 1 439 275 133 24 chr5 62747154 62747826 -136882324 - L1MC5 LINE L1 -290 7671 7098 2061 128 0 0 chr5 62748410 62748727 -136881423 + AluSx SINE Alu 1 317 0 259 304 130 17 chr5 62748892 62749007 -136881143 + MIR SINE MIR 21 148 -60 686 113 0 4 chr5 62749042 62749254 -136880896 + AluSx SINE Alu 1 299 -11 1074 162 91 5 chr5 62750190 62750387 -136879763 - MLT1F LTR MaLR 0 542 329 243 0 0 0 chr5 62750399 62750426 -136879724 + (A)n Simple_repeat Simple_repeat 1 27 0 814 228 39 11 chr5 62750430 62750610 -136879540 - MLT1F LTR MaLR -372 195 11 5133 145 20 11 chr5 62750610 62751478 -136878672 - L1MB2 LINE L1 -9 6162 5288 180 216 0 0 chr5 62751557 62751594 -136878556 + L2 LINE L2 3261 3297 -16 699 284 5 18 chr5 62753693 62753911 -136876239 + LTR33 LTR ERVL 1 215 -306 406 265 15 15 chr5 62754007 62754139 -136876011 + LTR33 LTR ERVL 382 513 -8 263 305 191 0 chr5 62754698 62754829 -136875321 - MIR3 SINE MIR -20 188 33 2110 136 3 35 chr5 62755392 62755580 -136874570 + L1M3 LINE L1 5442 5616 -555 2541 106 93 18 chr5 62755580 62755978 -136874172 + MSTA LTR MaLR 1 428 0 2110 136 3 35 chr5 62755978 62756135 -136874015 + L1M3 LINE L1 5616 5776 -395 357 303 110 0 chr5 62757547 62757656 -136872494 + L2 LINE L2 3143 3263 -9 319 346 0 0 chr5 62757673 62757780 -136872370 + MIR SINE MIR 34 140 -122 219 69 0 0 chr5 62757833 62757862 -136872288 + (TG)n Simple_repeat Simple_repeat 2 30 0 276 143 0 0 chr5 62757862 62757918 -136872232 + (TA)n Simple_repeat Simple_repeat 2 57 0 252 0 0 0 chr5 62758885 62758913 -136871237 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 405 0 0 0 chr5 62758912 62758957 -136871193 + (TG)n Simple_repeat Simple_repeat 1 45 0 205 325 52 0 chr5 62759154 62759231 -136870919 + MIR3 SINE MIR 85 165 -43 32418 90 19 10 chr5 62760207 62765689 -136864461 - L1PA7 LINE L1 -4 6150 625 728 281 127 24 chr5 62766258 62766680 -136863470 + L2 LINE L2 2521 3052 -261 195 191 0 0 chr5 62766783 62766825 -136863325 + L2 LINE L2 3231 3272 0 25 0 0 0 chr5 62767095 62767120 -136863030 + AT_rich Low_complexity Low_complexity 1 25 0 1603 247 92 27 chr5 62767218 62767699 -136862451 + LTR33 LTR ERVL 4 515 -6 2233 117 0 0 chr5 62767705 62768003 -136862147 - AluSg SINE Alu -12 298 1 254 306 121 8 chr5 62768749 62768873 -136861277 + MIR SINE MIR 51 188 -74 2047 172 76 5 chr5 62768883 62769278 -136860872 + L1MC2 LINE L1 5917 6339 -5 34 42 0 0 chr5 62769300 62769348 -136860802 + AT_rich Low_complexity Low_complexity 1 48 0 509 281 20 7 chr5 62770303 62770456 -136859694 - MER103 DNA DNA 0 166 12 2224 127 3 0 chr5 62770540 62770848 -136859302 + AluSx SINE Alu 1 309 -3 28 0 0 0 chr5 62770974 62771002 -136859148 + AT_rich Low_complexity Low_complexity 1 28 0 386 0 0 0 chr5 62771280 62771324 -136858826 - MADE1 DNA Mariner 0 80 37 373 23 0 0 chr5 62772127 62772171 -136857979 + MADE1 DNA Mariner 37 80 0 422 321 37 82 chr5 62772267 62772459 -136857691 + MIR SINE MIR 6 184 -78 1555 167 36 4 chr5 62772459 62772582 -136857568 + AluJb SINE Alu 1 119 -193 342 0 0 0 chr5 62772582 62772620 -136857530 + (CA)n Simple_repeat Simple_repeat 2 39 0 1555 167 36 4 chr5 62772620 62772772 -136857378 + AluJb SINE Alu 119 285 -27 422 321 37 82 chr5 62772772 62772847 -136857303 + MIR SINE MIR 184 261 -1 338 294 196 32 chr5 62775335 62775968 -136854182 + L2 LINE L2 2118 2854 -460 885 206 55 0 chr5 62776034 62776199 -136853951 - FAM SINE Alu 0 175 2 424 303 50 0 chr5 62776202 62776321 -136853829 + L2 LINE L2 3125 3249 -23 2085 168 40 59 chr5 62776938 62777413 -136852737 - MLT1C LTR MaLR -1 466 1 962 177 29 29 chr5 62778076 62778251 -136851899 + FAM SINE Alu 1 175 0 1802 162 40 7 chr5 62778317 62778619 -136851531 + AluJo SINE Alu 1 312 0 302 215 153 62 chr5 62778738 62778931 -136851219 - L1ME4a LINE L1 -4 6117 5943 1740 154 27 13 chr5 62778931 62779229 -136850921 - AluJb SINE Alu -10 302 1 302 215 153 62 chr5 62779229 62779429 -136850721 - L1ME4a LINE L1 -178 5943 5652 356 203 0 0 chr5 62779633 62779702 -136850448 + AluJ/FLAM SINE Alu 1 69 -233 243 231 0 0 chr5 62779731 62779783 -136850367 + G-rich Low_complexity Low_complexity 1 52 0 830 180 111 11 chr5 62779786 62779975 -136850175 + MER50 LTR ERV1 33 240 -494 * 1930 115 7 7 chr5 62779958 62780237 -136849913 + MER50 LTR ERV1 433 711 -23 258 267 0 0 chr5 62780238 62780298 -136849852 + FLAM_A SINE Alu 67 126 -7 199 344 107 8 chr5 62780555 62780686 -136849464 + MIR SINE MIR 3 146 -116 272 279 196 13 chr5 62780718 62780876 -136849274 - MIR SINE MIR -54 208 22 978 191 47 57 chr5 62781024 62781322 -136848828 - MER96B DNA MER1_type? 0 417 123 2665 35 0 7 chr5 62781327 62781637 -136848513 + AluY SINE Alu 1 308 -3 2515 121 39 14 chr5 62781705 62782060 -136848090 - THE1B LTR MaLR 0 364 1 13027 82 1 1 chr5 62782060 62783640 -136846510 - THE1B-int LTR MaLR 0 1580 1 2414 146 34 14 chr5 62783640 62783997 -136846153 - THE1B LTR MaLR 0 364 1 740 239 68 56 chr5 62784631 62784882 -136845268 - MIR SINE MIR 0 262 9 341 248 20 30 chr5 62785034 62785135 -136845015 + MIR SINE MIR 29 128 -134 726 245 131 63 chr5 62785733 62786252 -136843898 - LTR33A LTR ERVL 0 523 4 6115 102 12 12 chr5 62786519 62787013 -136843137 + L1PA13 LINE L1 5279 5775 -388 2557 102 25 22 chr5 62787013 62787376 -136842774 + THE1B LTR MaLR 1 364 0 6115 102 12 12 chr5 62787376 62787766 -136842384 + L1PA13 LINE L1 5774 6163 0 192 40 0 0 chr5 62787950 62787975 -136842175 + (TG)n Simple_repeat Simple_repeat 1 25 0 213 288 41 14 chr5 62788290 62788363 -136841787 + MIR SINE MIR 74 148 -114 21 0 0 0 chr5 62789316 62789337 -136840813 + AT_rich Low_complexity Low_complexity 1 21 0 300 200 0 0 chr5 62790231 62790301 -136839849 + (CA)n Simple_repeat Simple_repeat 2 71 0 316 189 144 0 chr5 62790304 62790394 -136839756 - L1ME4a LINE L1 -12 6109 6007 1886 137 31 3 chr5 62790605 62790897 -136839253 - AluJb SINE Alu -10 302 3 489 249 58 46 chr5 62790962 62791135 -136839015 - L1ME4a LINE L1 -462 5659 5485 1786 196 30 38 chr5 62791238 62791631 -136838519 + MLT1B LTR MaLR 1 390 0 1064 181 10 19 chr5 62791695 62791900 -136838250 - AluJb SINE Alu -5 307 105 2845 92 14 0 chr5 62792079 62792438 -136837712 - THE1B LTR MaLR 0 364 1 238 239 43 54 chr5 62792778 62792870 -136837280 + LTR67 LTR ERVL 457 547 -10 234 0 0 0 chr5 62794317 62794343 -136835807 + (A)n Simple_repeat Simple_repeat 1 26 0 25 0 0 0 chr5 62795962 62795987 -136834163 + AT_rich Low_complexity Low_complexity 1 25 0 1765 139 26 40 chr5 62796230 62796532 -136833618 - AluSx SINE Alu -14 298 1 279 277 50 10 chr5 62797803 62797904 -136832246 - MER5B DNA MER1_type -2 176 72 305 247 81 86 chr5 62798266 62798614 -136831536 + L1ME4a LINE L1 5573 5918 -203 345 47 0 0 chr5 62798646 62798689 -136831461 + (TG)n Simple_repeat Simple_repeat 2 44 0 860 258 35 1 chr5 62799434 62799643 -136830507 - MIR SINE MIR -14 248 35 1059 221 69 0 chr5 62799965 62800196 -136829954 + MIR SINE MIR 2 248 -14 23 0 0 0 chr5 62800201 62800224 -136829926 + AT_rich Low_complexity Low_complexity 1 23 0 2403 119 12 6 chr5 62801659 62801994 -136828156 + MER1B DNA MER1_type 1 337 0 645 252 110 8 chr5 62802038 62802256 -136827894 + MIR SINE MIR 15 251 -11 2061 144 99 9 chr5 62803113 62803447 -136826703 + MLT1A1 LTR MaLR 1 364 -1 770 262 107 79 chr5 62803971 62804441 -136825709 - MLT1G1 LTR MaLR 0 595 40 391 270 27 27 chr5 62804516 62804627 -136825523 - MIR3 SINE MIR -9 199 89 253 211 275 28 chr5 62804647 62804756 -136825394 - L2 LINE L2 -5 3267 3132 21 36 0 0 chr5 62804972 62805000 -136825150 + AT_rich Low_complexity Low_complexity 1 28 0 273 287 68 87 chr5 62805532 62806067 -136824083 - L2 LINE L2 -211 3061 2511 285 302 215 6 chr5 62806070 62806242 -136823908 - L2 LINE L2 -979 2335 2128 217 214 0 0 chr5 62807302 62807344 -136822806 + CT-rich Low_complexity Low_complexity 4 45 0 904 227 11 90 chr5 62807794 62808071 -136822079 - MIR SINE MIR -6 256 2 262 283 151 40 chr5 62808399 62808551 -136821599 - MIR SINE MIR -73 189 21 270 0 0 0 chr5 62809331 62809361 -136820789 + (TG)n Simple_repeat Simple_repeat 2 31 0 206 273 0 0 chr5 62810464 62810508 -136819642 + polypyrimidine Low_complexity Low_complexity 1 44 0 1277 249 59 86 chr5 62810549 62810875 -136819275 + MLT1L LTR MaLR 120 453 -162 2555 73 0 0 chr5 62810875 62811175 -136818975 - AluSc SINE Alu -9 300 1 1277 249 59 86 chr5 62811175 62811254 -136818896 + MLT1L LTR MaLR 453 533 -82 1647 174 33 10 chr5 62811254 62811559 -136818591 - AluJo SINE Alu 0 312 1 1277 249 59 86 chr5 62811559 62811662 -136818488 + MLT1L LTR MaLR 533 615 0 21 0 0 0 chr5 62811711 62811732 -136818418 + AT_rich Low_complexity Low_complexity 1 21 0 34 24 0 0 chr5 62812080 62812121 -136818029 + AT_rich Low_complexity Low_complexity 1 41 0 22 56 0 0 chr5 62812677 62812713 -136817437 + AT_rich Low_complexity Low_complexity 1 36 0 471 304 93 12 chr5 62813246 62813407 -136816743 + MER91A DNA MER1_type 1 174 -22 230 325 13 26 chr5 62813417 62813494 -136816656 + MER91A DNA MER1_type 121 196 0 268 303 8 42 chr5 62814605 62814724 -136815426 + CT-rich Low_complexity Low_complexity 5 119 0 439 303 160 20 chr5 62815122 62815472 -136814678 - LTR16C LTR ERVL 0 491 93 1658 193 52 60 chr5 62817494 62817535 -136812615 + MLT2B1 LTR ERVL 1 41 -479 4408 58 319 0 chr5 62817535 62818161 -136811989 - LTR12 LTR ERV1 0 826 1 1658 193 52 60 chr5 62818161 62818503 -136811647 + MLT2B1 LTR ERVL 41 381 -139 241 263 30 61 chr5 62818611 62818710 -136811440 + L2 LINE L2 3165 3260 -12 261 206 0 48 chr5 62818927 62818990 -136811160 - MLT1J2 LTR MaLR -353 97 38 413 235 29 59 chr5 62820561 62820731 -136809419 - L1ME4a LINE L1 -2 6119 5955 181 325 49 73 chr5 62820969 62821092 -136809058 - L2 LINE L2 -11 3261 3142 22 0 0 0 chr5 62821153 62821175 -136808975 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 62821936 62821960 -136808190 + AT_rich Low_complexity Low_complexity 1 24 0 1537 166 122 20 chr5 62821960 62822304 -136807846 - L1MA8 LINE L1 0 6291 5913 623 199 51 13 chr5 62822459 62822624 -136807526 + MIR SINE MIR 66 243 -19 253 236 19 123 chr5 62823149 62823255 -136806895 + L2 LINE L2 2918 3012 -260 478 351 48 6 chr5 62823731 62823896 -136806254 + L2 LINE L2 3101 3272 0 547 303 120 19 chr5 62824690 62824957 -136805193 - L2 LINE L2 0 3313 3020 448 304 34 82 chr5 62825046 62825216 -136804934 - L2 LINE L2 -503 2811 2659 2119 140 0 9 chr5 62825216 62825531 -136804619 + AluJb SINE Alu 1 312 0 448 304 34 82 chr5 62825531 62825653 -136804497 - L2 LINE L2 -655 2659 2533 182 394 0 0 chr5 62825649 62825715 -136804435 + MIR SINE MIR 196 261 -1 * 1257 334 37 26 chr5 62827112 62827759 -136802391 - ERVL LTR ERVL -338 5426 4773 490 161 18 0 chr5 62827807 62827919 -136802231 + (TA)n Simple_repeat Simple_repeat 2 115 0 2301 148 36 16 chr5 62827919 62828422 -136801728 - MLT2A2 LTR ERVL -40 494 1 303 314 52 23 chr5 62828539 62828803 -136801347 - ERVL LTR ERVL -876 4609 4321 * 1062 289 19 3 chr5 62828802 62829113 -136801037 - ERVL LTR ERVL -3395 2369 2054 3090 81 67 7 chr5 62829209 62829628 -136800522 - MLT2A1 LTR ERVL 0 444 1 2994 66 13 0 chr5 62829628 62830009 -136800141 - HERVL-A1 LTR ERVL 0 5654 5269 40254 71 10 4 chr5 62830109 62835044 -136795106 - HERVL-A1 LTR ERVL -563 5091 126 2143 127 0 10 chr5 62835044 62835351 -136794799 + AluSg SINE Alu 1 304 -6 40254 71 10 4 chr5 62835351 62835478 -136794672 - HERVL-A1 LTR ERVL -5528 126 1 319 53 0 0 chr5 62835478 62835516 -136794634 - MLT2A1 LTR ERVL 0 453 416 1778 161 10 3 chr5 62835624 62835915 -136794235 + AluJb SINE Alu 1 293 -19 319 348 18 18 chr5 62836135 62836299 -136793851 - ERVL LTR ERVL -4838 926 763 490 309 114 47 chr5 62836306 62836883 -136793267 - ERVL LTR ERVL -4379 617 2 536 183 38 23 chr5 62836893 62837024 -136793126 - LTR16C LTR ERVL -13 478 346 823 184 60 30 chr5 62837458 62837626 -136792524 + FRAM SINE Alu 1 171 -5 284 109 55 18 chr5 62837629 62837684 -136792466 + MLT1L LTR MaLR 531 587 -28 1000 174 0 12 chr5 62838140 62838307 -136791843 + AluJb SINE Alu 134 298 -14 306 50 0 0 chr5 62838641 62838681 -136791469 + (GA)n Simple_repeat Simple_repeat 1 40 0 2172 123 67 17 chr5 62839635 62839992 -136790158 - THE1C LTR MaLR 0 375 1 781 210 6 6 chr5 62840075 62840232 -136789918 + MIR SINE MIR 100 256 -6 258 160 0 0 chr5 62840241 62840291 -136789859 + (CAT)n Simple_repeat Simple_repeat 2 51 0 750 181 22 0 chr5 62840477 62840615 -136789535 + MLT1C LTR MaLR 1 141 -326 23 0 0 0 chr5 62840622 62840645 -136789505 + AT_rich Low_complexity Low_complexity 1 23 0 7355 38 3 1 chr5 62840645 62841514 -136788636 - L1PA5 LINE L1 -11 6143 5273 1242 221 25 83 chr5 62841514 62841876 -136788274 + MLT1C LTR MaLR 127 467 0 579 229 0 0 chr5 62842149 62842293 -136787857 + CT-rich Low_complexity Low_complexity 1 144 0 2119 123 7 0 chr5 62842368 62842668 -136787482 - AluSx SINE Alu -10 302 1 296 261 78 123 chr5 62845040 62845308 -136784842 + MLT1K LTR MaLR 330 585 -3 1374 239 129 18 chr5 62845660 62846103 -136784047 + HAL1 LINE L1 1389 1880 -627 623 259 46 23 chr5 62846111 62846327 -136783823 - L1ME3A LINE L1 -286 5884 5664 3784 253 50 46 chr5 62846337 62848002 -136782148 + L1ME LINE L1 3995 5680 -490 189 0 0 0 chr5 62848291 62848312 -136781838 + (A)n Simple_repeat Simple_repeat 1 21 0 2430 63 0 3 chr5 62848313 62848614 -136781536 + AluY SINE Alu 1 300 -11 1661 181 7 30 chr5 62848697 62849001 -136781149 - AluJo SINE Alu -15 297 1 2110 125 3 0 chr5 62849350 62849638 -136780512 - AluSx SINE Alu -23 289 1 401 306 60 66 chr5 62850075 62850392 -136779758 - MLT1J LTR MaLR -196 315 1 1658 203 72 14 chr5 62851729 62852074 -136778076 - MLT1A1 LTR MaLR 0 365 1 580 271 33 11 chr5 62853583 62853919 -136776231 - MLT1I LTR MaLR -6 403 1 2157 124 0 3 chr5 62856342 62856641 -136773509 + AluSx SINE Alu 1 298 -14 498 283 137 27 chr5 62856884 62857116 -136773034 - MIR SINE MIR -7 255 2 2519 219 76 12 chr5 62857694 62858298 -136771852 - LTR48B LTR ERV1 0 644 2 29 28 0 0 chr5 62858642 62858678 -136771472 + AT_rich Low_complexity Low_complexity 1 36 0 485 241 97 14 chr5 62859046 62859191 -136770959 - MER103 DNA DNA -2 164 8 252 200 0 0 chr5 62859487 62859542 -136770608 + (TAA)n Simple_repeat Simple_repeat 2 56 0 4861 114 7 48 chr5 62859974 62860695 -136769455 - LTR8 LTR ERV1 0 691 1 312 27 0 0 chr5 62861464 62861501 -136768649 + (CA)n Simple_repeat Simple_repeat 1 37 0 5481 144 18 30 chr5 62861654 62862568 -136767582 + MER4D LTR ERV1 1 903 0 4088 109 28 35 chr5 62863282 62863933 -136766217 + LTR34 LTR ERV1 54 699 0 390 345 108 26 chr5 62864433 62864740 -136765410 - L2 LINE L2 -22 3250 2919 419 266 14 70 chr5 62865887 62866030 -136764120 + MER69A DNA AcHobo 1 135 -42 5252 213 64 31 chr5 62866217 62867505 -136762645 - L1MC4 LINE L1 -30 8012 6591 342 0 0 0 chr5 62867505 62867543 -136762607 + (CA)n Simple_repeat Simple_repeat 1 38 0 5252 213 64 31 chr5 62867543 62867699 -136762451 - L1MC4 LINE L1 -1451 6591 6442 927 274 225 7 chr5 62868282 62868705 -136761445 + LTR33A LTR ERVL 1 515 -8 698 246 40 15 chr5 62868740 62868939 -136761211 + MLT1K LTR MaLR 322 525 -63 2377 71 0 0 chr5 62868951 62869233 -136760917 + AluY SINE Alu 1 282 -29 26 0 0 0 chr5 63071637 63071663 -136558487 + AT_rich Low_complexity Low_complexity 1 26 0 810 224 16 30 chr5 63071943 63072188 -136557962 + L1MC5 LINE L1 7014 7175 -633 8904 68 4 38 chr5 63072229 63073536 -136556614 + L1P LINE L1 2932 4194 -1952 2221 119 0 0 chr5 63073536 63073839 -136556311 + AluSq SINE Alu 1 303 -10 23 33 0 0 chr5 63074211 63074241 -136555909 + AT_rich Low_complexity Low_complexity 1 30 0 1800 149 7 4 chr5 63074986 63075261 -136554889 - AluJo SINE Alu -36 276 1 22 56 0 0 chr5 63075593 63075629 -136554521 + AT_rich Low_complexity Low_complexity 1 36 0 1287 133 14 43 chr5 63075635 63075845 -136554305 + AluJo SINE Alu 85 288 -24 228 146 91 0 chr5 63075851 63075906 -136554244 - L1MA8 LINE L1 -10 6281 6222 586 124 0 0 chr5 63075906 63075995 -136554155 - Tigger4(Zombi) DNA MER2_type 0 2731 2643 2025 133 24 0 chr5 63076033 63076326 -136553824 - AluSq SINE Alu -13 300 1 841 151 8 0 chr5 63076635 63076761 -136553389 + FLAM_C SINE Alu 1 127 -6 2598 146 22 35 chr5 63076767 63077220 -136552930 - MER44D DNA MER2_type -236 469 23 1531 173 0 0 chr5 63077772 63078003 -136552147 - AluSx SINE Alu -81 231 1 1658 134 97 0 chr5 63078012 63078281 -136551869 - AluSx SINE Alu -17 295 1 674 202 0 0 chr5 63078485 63078599 -136551551 - FRAM SINE Alu -62 114 1 2076 82 45 0 chr5 63078790 63079058 -136551092 + AluSg SINE Alu 1 280 -30 1365 198 55 4 chr5 63079185 63079458 -136550692 + AluJo SINE Alu 1 287 -25 2531 32 3 25 chr5 63079846 63080161 -136549989 + AluY SINE Alu 1 308 -3 346 118 49 0 chr5 63080548 63080650 -136549500 + (TG)n Simple_repeat Simple_repeat 1 107 0 1193 190 0 0 chr5 63080656 63080856 -136549294 - AluJo SINE Alu -26 286 87 220 320 82 10 chr5 63081584 63081681 -136548469 - MER5B DNA MER1_type -63 115 12 * 252 324 0 27 chr5 63081608 63081682 -136548468 + MER5A DNA MER1_type 107 178 -11 2341 86 7 10 chr5 63081742 63082046 -136548104 + AluY SINE Alu 1 303 -8 2036 95 14 11 chr5 63083142 63083425 -136546725 + AluSx SINE Alu 14 297 -15 311 159 0 16 chr5 63083740 63083803 -136546347 + Alu SINE Alu 241 302 0 1263 115 0 6 chr5 63083812 63083986 -136546164 + AluSg/x SINE Alu 122 294 -16 1736 115 4 4 chr5 63083992 63084260 -136545890 + AluSg SINE Alu 40 307 0 23 0 0 0 chr5 63084561 63084584 -136545566 + AT_rich Low_complexity Low_complexity 1 23 0 1690 155 3 27 chr5 63084584 63084881 -136545269 - AluJo SINE Alu -22 290 1 827 168 0 0 chr5 63084881 63085012 -136545138 - AluJo/FLAM SINE Alu -181 131 1 1766 149 29 0 chr5 63085088 63085369 -136544781 - AluJb SINE Alu -13 299 11 318 268 116 12 chr5 63085379 63085523 -136544627 + LTR33 LTR ERVL 11 200 -321 267 153 85 0 chr5 63085529 63085542 -136544608 + LTR33A LTR ERVL 446 456 -67 2097 134 7 0 chr5 63085542 63085848 -136544302 + AluSq SINE Alu 1 308 -5 267 153 85 0 chr5 63085848 63085893 -136544257 + LTR33A LTR ERVL 456 509 -14 2234 93 0 0 chr5 63085936 63086215 -136543935 - AluSc SINE Alu -30 279 1 231 229 0 0 chr5 63087482 63087530 -136542620 - L2 LINE L2 -1 3271 3224 2548 47 0 0 chr5 63088733 63089033 -136541117 + AluY SINE Alu 1 300 -11 265 218 36 0 chr5 63089230 63089285 -136540865 - L2 LINE L2 -2 3311 3255 1700 148 58 0 chr5 63089741 63090018 -136540132 + AluJo SINE Alu 1 293 -19 1468 182 8 0 chr5 63090070 63090328 -136539822 - AluJb SINE Alu -10 302 43 383 107 13 0 chr5 63090794 63090869 -136539281 + (TA)n Simple_repeat Simple_repeat 2 77 0 1755 136 10 44 chr5 63090869 63091164 -136538986 - AluSx SINE Alu -27 285 1 611 157 0 0 chr5 63091209 63091298 -136538852 + AluSg/x SINE Alu 210 298 -14 648 111 0 0 chr5 63091298 63091397 -136538753 + (GGAA)n Simple_repeat Simple_repeat 2 100 0 2062 115 66 0 chr5 63091458 63091745 -136538405 + AluSx SINE Alu 1 306 -6 704 193 145 0 chr5 63091927 63092072 -136538078 - MER93a LTR ERV1 0 402 237 698 88 0 0 chr5 63092070 63092161 -136537989 - MER93b LTR ERV1 -282 91 1 * 1656 195 26 0 chr5 63092272 63092574 -136537576 - AluJb SINE Alu -2 310 1 55 56 0 0 chr5 63092580 63092670 -136537480 + AT_rich Low_complexity Low_complexity 1 90 0 758 167 0 30 chr5 63092670 63092802 -136537348 + FLAM_A SINE Alu 11 138 -4 1120 93 0 93 chr5 63092851 63093045 -136537105 + AluY SINE Alu 133 308 -3 283 277 32 52 chr5 63093105 63093260 -136536890 - L1ME LINE L1 -396 5725 5574 762 93 0 0 chr5 63093261 63093358 -136536792 - AluSg/x SINE Alu -11 298 202 1952 176 148 23 chr5 63093563 63094001 -136536149 - MLT1D LTR MaLR -10 495 3 365 219 211 18 chr5 63094016 63094130 -136536020 + MER5A DNA MER1_type 53 188 -1 2264 99 3 7 chr5 63094133 63094437 -136535713 - AluSp SINE Alu -10 303 1 261 164 29 87 chr5 63094458 63094562 -136535588 - L1ME4a LINE L1 -49 6072 5975 30 27 0 0 chr5 63094653 63094690 -136535460 + AT_rich Low_complexity Low_complexity 1 37 0 2115 107 0 3 chr5 63094690 63094980 -136535170 - AluSx SINE Alu -23 289 1 2236 112 0 0 chr5 63094982 63095277 -136534873 - AluSx SINE Alu -17 295 1 895 250 13 9 chr5 63095415 63095643 -136534507 + MIR SINE MIR 34 262 0 2273 90 0 3 chr5 63095679 63095985 -136534165 - AluSp SINE Alu 0 305 1 25 0 0 0 chr5 63096023 63096048 -136534102 + AT_rich Low_complexity Low_complexity 1 25 0 2138 94 0 0 chr5 63096059 63096373 -136533777 - AluSg SINE Alu 0 318 5 683 203 0 0 chr5 63096384 63096396 -136533754 - FLAM_A SINE Alu -182 120 109 297 0 0 0 chr5 63096396 63096429 -136533721 + (TG)n Simple_repeat Simple_repeat 1 33 0 683 203 0 0 chr5 63096429 63096534 -136533616 - FLAM_A SINE Alu -192 110 3 213 223 259 27 chr5 63098962 63099074 -136531076 - MER5A DNA MER1_type -8 181 44 * 375 254 183 0 chr5 63098979 63099105 -136531045 + MER5A DNA MER1_type 40 188 -1 329 199 174 27 chr5 63099195 63099327 -136530823 - MIR3 SINE MIR -76 132 1 1947 105 14 11 chr5 63099482 63099767 -136530383 - AluSg SINE Alu -11 299 14 2383 86 3 0 chr5 63099782 63100085 -136530065 - AluSp SINE Alu -9 304 1 1721 181 41 64 chr5 63100263 63100488 -136529662 - MLT1B LTR MaLR -7 383 169 2424 77 6 0 chr5 63100488 63100799 -136529351 - AluSq SINE Alu 0 313 1 1721 181 41 64 chr5 63100799 63100965 -136529185 - MLT1B LTR MaLR -221 169 1 1695 167 0 35 chr5 63101034 63101352 -136528798 - AluJb SINE Alu -5 307 1 694 201 22 30 chr5 63101441 63101575 -136528575 - FLAM_A SINE Alu 0 133 1 208 279 120 135 chr5 63101586 63102127 -136528023 + L2 LINE L2 1773 2305 -1009 991 170 13 0 chr5 63102313 63102472 -136527678 - AluSp SINE Alu -13 300 140 2086 118 45 0 chr5 63102484 63102773 -136527377 - AluSq SINE Alu -11 302 1 407 323 32 14 chr5 63102843 63103060 -136527090 - L2 LINE L2 -159 3154 2934 5960 126 150 19 chr5 63103241 63104035 -136526115 - Tigger3b DNA MER2_type -1797 1231 542 1319 214 14 31 chr5 63104035 63104325 -136525825 + AluJo SINE Alu 5 289 -23 2276 99 7 7 chr5 63104328 63104630 -136525520 + AluSq SINE Alu 1 302 -11 5960 126 150 19 chr5 63104630 63104900 -136525250 - Tigger3b DNA MER2_type -2487 541 23 1646 120 3 60 chr5 63104900 63105217 -136524933 - AluJb SINE Alu -13 299 1 573 116 53 32 chr5 63105222 63105317 -136524833 - FLAM_C SINE Alu -11 132 36 233 297 31 0 chr5 63105677 63105741 -136524409 - L2 LINE L2 0 3272 3207 2340 91 0 7 chr5 63105980 63106287 -136523863 - AluSx SINE Alu -7 305 1 2089 119 0 7 chr5 63106311 63106606 -136523544 + AluSx SINE Alu 1 293 -19 2122 108 7 3 chr5 63106840 63107128 -136523022 - AluSp SINE Alu -24 289 1 2346 96 3 6 chr5 63107134 63107448 -136522702 - AluSq SINE Alu 0 313 1 2357 89 0 0 chr5 63107483 63107775 -136522375 - AluSc SINE Alu -17 292 1 2088 98 7 17 chr5 63108208 63108528 -136521622 + AluSq SINE Alu 1 317 0 677 181 0 0 chr5 63108807 63108912 -136521238 + U6 snRNA snRNA 1 105 -2 468 51 0 0 chr5 63109014 63109073 -136521077 + (TG)n Simple_repeat Simple_repeat 1 59 0 618 209 0 0 chr5 63109137 63109247 -136520903 + FLAM_A SINE Alu 25 134 -8 2253 93 10 0 chr5 63109723 63110023 -136520127 - AluY SINE Alu -8 303 1 1967 118 25 0 chr5 63110225 63110504 -136519646 + AluSx SINE Alu 1 286 -26 294 106 0 0 chr5 63110519 63110566 -136519584 + (TA)n Simple_repeat Simple_repeat 1 47 0 2037 140 2 79 chr5 63111092 63111485 -136518665 + MER47A DNA MER2_type 4 366 0 300 270 66 51 chr5 63111792 63111929 -136518221 - L1ME3A LINE L1 -6 6164 6026 1114 225 98 43 chr5 63111951 63112318 -136517832 - L1ME3A LINE L1 -554 5608 5263 2093 122 7 3 chr5 63112318 63112613 -136517537 + AluSx SINE Alu 1 296 -16 1114 225 98 43 chr5 63112613 63112743 -136517407 - L1ME3A LINE L1 -899 5263 5142 1758 157 10 20 chr5 63112743 63113037 -136517113 - AluJo SINE Alu -21 291 1 1114 225 98 43 chr5 63113037 63113174 -136516976 - L1ME3A LINE L1 -1020 5142 4960 1895 144 27 3 chr5 63113212 63113510 -136516640 - AluJb SINE Alu -7 305 1 944 129 0 0 chr5 63113513 63113645 -136516505 - AluJb SINE Alu -180 132 1 551 200 10 0 chr5 63113714 63113814 -136516336 - Tigger7 DNA MER2_type 0 2587 2487 967 247 117 4 chr5 63113814 63114053 -136516097 - Tigger7 DNA MER2_type -2220 267 2 1832 164 0 26 chr5 63114178 63114488 -136515662 - AluJo SINE Alu -10 302 1 194 0 39 0 chr5 63114579 63114605 -136515545 + (TTTAA)n Simple_repeat Simple_repeat 4 30 0 806 179 6 26 chr5 63114681 63114837 -136515313 - FRAM SINE Alu -30 146 1 200 277 31 31 chr5 63114986 63115051 -136515099 + MIR3 SINE MIR 137 201 -7 1101 211 18 31 chr5 63115911 63116138 -136514012 + Tigger3(Golem) DNA MER2_type 2 225 -2804 483 232 0 0 chr5 63116137 63116219 -136513931 + Tigger3(Golem) DNA MER2_type 2953 3034 0 * 1192 180 177 30 chr5 63116804 63117166 -136512984 - Charlie1 DNA MER1_type -4 2757 2343 295 203 58 29 chr5 63117164 63117233 -136512917 - Charlie1 DNA MER1_type -2690 71 1 * 2181 101 44 3 chr5 63117609 63117907 -136512243 + AluSg SINE Alu 1 310 0 231 36 0 0 chr5 63118295 63118323 -136511827 + (TG)n Simple_repeat Simple_repeat 2 29 0 333 0 0 0 chr5 63118356 63118393 -136511757 + (TG)n Simple_repeat Simple_repeat 1 37 0 1223 185 0 0 chr5 63118399 63118599 -136511551 - AluJo SINE Alu -26 286 87 220 320 82 10 chr5 63119327 63119424 -136510726 - MER5B DNA MER1_type -63 115 12 * 252 324 0 27 chr5 63119351 63119425 -136510725 + MER5A DNA MER1_type 107 178 -11 2341 86 7 10 chr5 63119485 63119789 -136510361 + AluY SINE Alu 1 303 -8 2036 95 14 11 chr5 63120884 63121167 -136508983 + AluSx SINE Alu 14 297 -15 1554 182 0 0 chr5 63121415 63121657 -136508493 - AluSx SINE Alu -70 242 1 1658 134 97 0 chr5 63121666 63121935 -136508215 - AluSx SINE Alu -17 295 1 674 202 0 0 chr5 63122139 63122253 -136507897 - FRAM SINE Alu -62 114 1 2025 82 45 4 chr5 63122444 63122713 -136507437 + AluSg SINE Alu 1 280 -30 1398 199 55 0 chr5 63122840 63123112 -136507038 + AluJo SINE Alu 1 287 -25 2624 36 3 0 chr5 63123500 63123805 -136506345 + AluY SINE Alu 1 306 -5 1941 149 0 0 chr5 63123958 63124234 -136505916 - AluSx SINE Alu -36 276 1 225 0 0 0 chr5 63125023 63125048 -136505102 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2112 113 3 3 chr5 63125191 63125482 -136504668 - AluSg SINE Alu -19 291 1 425 283 170 36 chr5 63125554 63126068 -136504082 - L1MC5 LINE L1 -7 8035 7468 1451 163 101 103 chr5 63126696 63127162 -136502988 - MER31B LTR ERV1 0 466 2 980 206 63 5 chr5 63127410 63127633 -136502517 - MER46A DNA MER2_type 0 236 1 963 162 32 0 chr5 63128175 63128329 -136501821 - FRAM SINE Alu -17 159 1 212 220 20 0 chr5 63128622 63128672 -136501478 + (TA)n Simple_repeat Simple_repeat 2 52 0 1546 195 14 20 chr5 63128686 63128978 -136501172 - AluJo SINE Alu -20 292 3 1997 125 10 39 chr5 63129016 63129321 -136500829 + AluJb SINE Alu 1 296 -16 2178 112 0 3 chr5 63129460 63129756 -136500394 - AluSx SINE Alu -15 297 3 2175 98 30 0 chr5 63129778 63130073 -136500077 - AluSc SINE Alu -5 304 1 1459 177 26 35 chr5 63130094 63130405 -136499745 - AluJb SINE Alu -2 310 3 2859 214 13 16 chr5 63131348 63131896 -136498254 - REP3 LTR ERV -8 554 9 336 253 24 65 chr5 63132458 63132628 -136497522 - MER112 DNA MER1_type -95 165 3 1208 221 118 11 chr5 63133569 63133849 -136496301 - AluSx SINE Alu -2 310 1 314 300 0 50 chr5 63134716 63134816 -136495334 - L2 LINE L2 -223 3049 2955 438 270 148 16 chr5 63135175 63135381 -136494769 - MIR SINE MIR -25 237 5 217 295 175 55 chr5 63135363 63135563 -136494587 - L3 LINE CR1 -427 1150 927 * 221 270 16 32 chr5 63135677 63135740 -136494410 + MIR SINE MIR 18 79 -129 22 0 0 0 chr5 63136359 63136381 -136493769 + AT_rich Low_complexity Low_complexity 1 22 0 2115 130 13 0 chr5 63136460 63136768 -136493382 - AluSx SINE Alu 0 312 1 23 0 0 0 chr5 63136780 63136803 -136493347 + AT_rich Low_complexity Low_complexity 1 23 0 345 295 88 40 chr5 63137123 63137374 -136492776 - L1ME4a LINE L1 -71 6050 5788 321 280 88 10 chr5 63137427 63137620 -136492530 - L1ME4a LINE L1 -342 5779 5572 431 266 65 16 chr5 63137721 63137845 -136492305 + L2 LINE L2 3184 3313 0 2267 88 7 3 chr5 63138173 63138470 -136491680 - AluSx SINE Alu -14 298 1 2398 192 97 48 chr5 63138618 63139353 -136490797 + Looper DNA T2_type 190 960 -598 532 210 42 12 chr5 63139358 63139525 -136490625 + Looper DNA T2_type 1386 1557 -1 499 258 97 21 chr5 63139586 63139772 -136490378 - L2 LINE L2 -19 3294 3095 463 178 89 0 chr5 63140371 63140461 -136489689 - Tigger7 DNA MER2_type 0 2587 2490 * 1381 189 31 4 chr5 63140460 63140720 -136489430 - Tigger7 DNA MER2_type -466 267 1 587 191 43 0 chr5 63140733 63140848 -136489302 - FLAM_C SINE Alu -23 120 1 1752 148 46 11 chr5 63140879 63141163 -136488987 + AluJb SINE Alu 1 294 -18 192 270 111 0 chr5 63141658 63141721 -136488429 - L2 LINE L2 -15 3257 3188 580 219 113 122 chr5 63143561 63143819 -136486331 - L1MC5 LINE L1 -36 7925 7666 1892 152 0 3 chr5 63143819 63144108 -136486042 - AluJb SINE Alu -24 288 1 580 219 113 122 chr5 63144108 63144471 -136485679 - L1MC5 LINE L1 -295 7666 7310 18200 61 4 19 chr5 63144576 63146548 -136483602 - L1PA6 LINE L1 0 6154 4238 2547 64 0 10 chr5 63146548 63146861 -136483289 - AluY SINE Alu -1 310 1 18200 61 4 19 chr5 63146861 63148150 -136482000 - L1PA6 LINE L1 -1916 4238 2932 833 235 4 22 chr5 63148201 63148431 -136481719 - L1MC5 LINE L1 -722 7239 7014 26 0 0 0 chr5 63148712 63148738 -136481412 + AT_rich Low_complexity Low_complexity 1 26 0 221 333 17 0 chr5 63150351 63150411 -136479739 - MER91A DNA MER1_type -102 94 34 1675 177 3 39 chr5 63151202 63151513 -136478637 + AluJo SINE Alu 2 301 -11 2379 78 3 0 chr5 63151615 63151923 -136478227 - AluY SINE Alu -2 309 1 30 0 0 0 chr5 63152600 63152630 -136477520 + AT_rich Low_complexity Low_complexity 1 30 0 35 0 0 0 chr5 63152655 63152690 -136477460 + AT_rich Low_complexity Low_complexity 1 35 0 366 188 0 0 chr5 63152690 63152775 -136477375 - L1MA4A LINE L1 -5 6298 6214 1008 87 0 0 chr5 63152924 63153051 -136477099 + AluSc SINE Alu 166 292 -17 267 325 36 0 chr5 63153971 63154054 -136476096 + L2 LINE L2 3137 3222 -50 192 274 59 82 chr5 63154092 63154227 -136475923 - L2 LINE L2 -814 2500 2369 1798 166 0 17 chr5 63154365 63154660 -136475490 + AluJb SINE Alu 1 290 -22 24 0 0 0 chr5 63154868 63154892 -136475258 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 63154919 63154940 -136475210 + AT_rich Low_complexity Low_complexity 1 21 0 198 342 125 70 chr5 63155017 63155458 -136474692 - L2 LINE L2 0 3272 2808 23 0 0 0 chr5 63155865 63155888 -136474262 + AT_rich Low_complexity Low_complexity 1 23 0 1045 145 13 0 chr5 63156407 63156559 -136473591 - AluSg/x SINE Alu -22 290 137 236 316 13 0 chr5 63156745 63156824 -136473326 + L2 LINE L2 3234 3313 0 192 353 143 0 chr5 63156928 63157047 -136473103 - L2 LINE L2 0 3272 3137 782 168 165 28 chr5 63157115 63157306 -136472844 + MER33 DNA MER1_type 1 245 -2340 2116 60 0 19 chr5 63157306 63157573 -136472577 - AluY SINE Alu -13 298 37 782 168 165 28 chr5 63157573 63157666 -136472484 + MER33 DNA MER1_type 245 324 0 266 210 284 0 chr5 63157674 63157755 -136472395 - MER5A DNA MER1_type 0 189 86 1588 179 29 4 chr5 63158196 63158476 -136471674 - AluSx SINE Alu -25 287 1 1784 167 7 7 chr5 63159212 63159505 -136470645 - AluSx SINE Alu -16 296 4 1548 214 13 0 chr5 63161106 63161410 -136468740 - AluJb SINE Alu -4 308 1 233 258 97 21 chr5 63161552 63161645 -136468505 + MER103 DNA DNA 4 103 -63 2295 97 7 0 chr5 63161653 63161951 -136468199 + AluSg SINE Alu 7 306 -4 353 303 15 8 chr5 63162283 63162415 -136467735 + (TA)n Simple_repeat Simple_repeat 2 134 0 1515 208 3 3 chr5 63163116 63163405 -136466745 - AluJb SINE Alu -21 291 3 1872 137 68 0 chr5 63164246 63164524 -136465626 + AluSx SINE Alu 1 297 -15 2426 152 100 7 chr5 63164749 63165209 -136464941 - Tigger3b DNA MER2_type -1 1230 728 816 50 0 0 chr5 63165209 63165308 -136464842 - AluY SINE Alu -7 304 206 3492 141 38 73 chr5 63165308 63165641 -136464509 - Tigger3b DNA MER2_type -2297 731 388 1933 159 17 3 chr5 63165641 63165943 -136464207 + AluJb SINE Alu 1 306 -6 3492 141 38 73 chr5 63165943 63166154 -136463996 - Tigger3b DNA MER2_type -2640 388 218 1612 191 3 3 chr5 63166154 63166436 -136463714 - AluJo SINE Alu -30 282 1 3492 141 38 73 chr5 63166436 63166647 -136463503 - Tigger3b DNA MER2_type -2810 218 1 26 0 0 0 chr5 63167175 63167201 -136462949 + AT_rich Low_complexity Low_complexity 1 26 0 2049 142 6 6 chr5 63168426 63168767 -136461383 - AluSx SINE Alu 0 341 1 200 235 0 43 chr5 63168952 63169114 -136461036 + (TTATA)n Simple_repeat Simple_repeat 3 157 0 224 274 168 9 chr5 63169123 63169236 -136460914 + L2 LINE L2 3173 3303 -10 21 57 0 0 chr5 63170413 63170448 -136459702 + AT_rich Low_complexity Low_complexity 1 35 0 321 311 18 90 chr5 63170896 63171063 -136459087 + L2 LINE L2 3109 3263 -9 264 296 41 10 chr5 63172724 63172822 -136457328 - MIR SINE MIR -3 259 159 245 269 170 35 chr5 63173124 63173265 -136456885 + MIR SINE MIR 53 212 -50 1522 146 13 76 chr5 63173796 63174111 -136456039 - AluSx SINE Alu -17 295 1 334 216 14 36 chr5 63174166 63174305 -136455845 + CT-rich Low_complexity Low_complexity 2 137 0 1897 55 0 23 chr5 63174305 63174561 -136455589 - L1PA6 LINE L1 -42 6112 5863 939 35 0 0 chr5 63174561 63174675 -136455475 + L1PA6 LINE L1 5754 5867 -287 368 288 105 16 chr5 63174884 63175075 -136455075 + Tigger8 DNA MER2_type 433 640 -26 1332 173 12 0 chr5 63175159 63175402 -136454748 - L1MB1 LINE L1 -9 6159 5914 2259 154 0 20 chr5 63175410 63175813 -136454337 - L1MB1 LINE L1 -366 5802 5408 585 277 43 40 chr5 63175951 63176279 -136453871 - L1MC4 LINE L1 -8 8034 7706 2072 123 10 3 chr5 63176397 63176697 -136453453 - AluSx SINE Alu -10 302 1 27 29 0 0 chr5 63177411 63177445 -136452705 + AT_rich Low_complexity Low_complexity 1 34 0 5669 37 31 1 chr5 63178269 63178923 -136451227 - SVA Other Other -4 1382 710 2138 102 3 3 chr5 63179532 63179825 -136450325 - AluSp SINE Alu -20 293 1 198 383 85 0 chr5 63180459 63180553 -136449597 + MIR SINE MIR 25 126 -82 1694 175 37 0 chr5 63181102 63181399 -136448751 + AluJb SINE Alu 1 308 -4 22 0 0 0 chr5 63181943 63181965 -136448185 + AT_rich Low_complexity Low_complexity 1 22 0 2238 105 3 0 chr5 63182163 63182459 -136447691 + AluSp SINE Alu 1 297 -16 1027 148 6 19 chr5 63182477 63182639 -136447511 + AluSg/x SINE Alu 139 298 -14 30 77 0 0 chr5 63183555 63183620 -136446530 + AT_rich Low_complexity Low_complexity 1 65 0 307 115 39 0 chr5 63183654 63183706 -136446444 - MER116 DNA Mariner 0 80 27 368 130 14 0 chr5 63185533 63185602 -136444548 + CT-rich Low_complexity Low_complexity 1 70 0 34 0 0 0 chr5 63186752 63186786 -136443364 + AT_rich Low_complexity Low_complexity 1 34 0 894 247 155 57 chr5 63187511 63188244 -136441906 + L1ME LINE L1 2812 3472 -2674 2221 98 7 0 chr5 63188244 63188539 -136441611 + AluSx SINE Alu 1 297 -15 894 247 155 57 chr5 63188539 63188585 -136441565 + L1ME LINE L1 3472 3512 -2634 1542 158 83 14 chr5 63188585 63188863 -136441287 + AluJo SINE Alu 1 297 -15 894 247 155 57 chr5 63188863 63188935 -136441215 + L1ME LINE L1 3512 3747 -2399 371 223 48 131 chr5 63188937 63189166 -136440984 + L1ME LINE L1 4584 4793 -1353 502 230 45 54 chr5 63189270 63189329 -136440821 + L1ME LINE L1 4976 5034 -1112 1885 159 0 3 chr5 63189329 63189624 -136440526 - AluSx SINE Alu -18 294 1 502 230 45 54 chr5 63189624 63189877 -136440273 + L1ME LINE L1 5034 5285 -861 1770 119 129 95 chr5 63190076 63190486 -136439664 - MSTA LTR MaLR 0 428 5 620 316 47 9 chr5 63190529 63190868 -136439282 + L1ME3A LINE L1 5595 5946 -224 2289 94 10 3 chr5 63190972 63191270 -136438880 - AluSq SINE Alu -12 301 2 40 37 0 0 chr5 63191823 63191877 -136438273 + AT_rich Low_complexity Low_complexity 1 54 0 1781 159 10 7 chr5 63192341 63192636 -136437514 - AluJo SINE Alu -16 296 1 591 263 56 132 chr5 63193405 63193792 -136436358 + LTR16B LTR ERVL 1 343 -121 2276 88 14 0 chr5 63193792 63194086 -136436064 - AluSq SINE Alu -15 298 1 591 263 56 132 chr5 63194086 63194200 -136435950 + LTR16B LTR ERVL 343 464 0 1207 216 33 49 chr5 63194505 63194811 -136435339 - L2 LINE L2 -464 2850 2550 238 238 12 75 chr5 63194818 63194898 -136435252 + MER5B DNA MER1_type 98 172 -6 295 297 198 31 chr5 63194986 63195098 -136435052 + MIR SINE MIR 8 100 -162 2306 74 3 17 chr5 63195098 63195396 -136434754 + AluSc SINE Alu 1 294 -15 295 297 198 31 chr5 63195396 63195475 -136434675 + MIR SINE MIR 100 231 -31 326 279 225 1 chr5 63195534 63195813 -136434337 + L1ME LINE L1 5478 5823 -298 1403 93 0 56 chr5 63195998 63196140 -136434010 + AluSx SINE Alu 1 129 -183 2290 99 0 0 chr5 63196140 63196433 -136433717 + AluSx SINE Alu 1 293 -19 1403 93 0 56 chr5 63196433 63196505 -136433645 + AluSx SINE Alu 129 203 -109 183 80 0 0 chr5 63196516 63196541 -136433609 + (A)n Simple_repeat Simple_repeat 1 25 0 785 156 0 30 chr5 63196550 63196685 -136433465 + FLAM_C SINE Alu 1 131 -12 26 50 0 0 chr5 63196953 63196993 -136433157 + AT_rich Low_complexity Low_complexity 1 40 0 458 272 50 0 chr5 63197004 63197184 -136432966 + L1ME LINE L1 5635 5823 -298 1844 166 7 0 chr5 63197494 63197783 -136432367 + AluSx SINE Alu 3 293 -19 181 261 43 0 chr5 63197824 63197870 -136432280 + L3 LINE CR1 1356 1403 -174 2196 124 7 0 chr5 63198659 63198958 -136431192 - AluJb SINE Alu -11 301 1 209 133 0 0 chr5 63200221 63200251 -136429899 + MER5B DNA MER1_type 11 40 -138 69 48 0 0 chr5 63200266 63200370 -136429780 + AT_rich Low_complexity Low_complexity 1 104 0 494 252 8 16 chr5 63200376 63200503 -136429647 - MER5B DNA MER1_type -45 133 8 552 195 172 0 chr5 63200769 63200897 -136429253 + MIR SINE MIR 97 246 -16 1913 155 13 3 chr5 63201300 63201609 -136428541 - AluJb SINE Alu 0 312 1 2222 99 3 3 chr5 63201666 63201960 -136428190 + AluSx SINE Alu 3 296 -16 1999 135 4 0 chr5 63201984 63202300 -136427850 + AluSx SINE Alu 1 317 0 35 41 0 0 chr5 63202680 63202729 -136427421 + AT_rich Low_complexity Low_complexity 1 49 0 2243 108 3 0 chr5 63202907 63203204 -136426946 + AluSx SINE Alu 2 299 -13 22 0 0 0 chr5 63203593 63203615 -136426535 + AT_rich Low_complexity Low_complexity 1 22 0 1951 80 60 60 chr5 63206834 63207133 -136423017 - AluSx SINE Alu -13 299 1 711 221 101 69 chr5 63207346 63207563 -136422587 - MER58A DNA MER1_type 0 224 1 1960 135 35 0 chr5 63207821 63208110 -136422040 - AluSx SINE Alu -12 300 2 1986 137 7 20 chr5 63208118 63208418 -136421732 - AluSx SINE Alu -16 296 1 2008 137 0 10 chr5 63209716 63210008 -136420142 - AluJb SINE Alu -23 289 1 272 271 60 46 chr5 63210281 63210608 -136419542 + Tigger8 DNA MER2_type 174 558 -108 2359 86 7 0 chr5 63211022 63211324 -136418826 - AluSq SINE Alu -9 304 1 2347 81 0 3 chr5 63211437 63211734 -136418416 + AluSq SINE Alu 1 296 -17 21 0 0 0 chr5 63212737 63212758 -136417392 + AT_rich Low_complexity Low_complexity 1 21 0 2169 110 0 32 chr5 63212774 63213083 -136417067 + AluSx SINE Alu 1 299 -13 37 0 0 0 chr5 63213244 63213281 -136416869 + AT_rich Low_complexity Low_complexity 1 37 0 539 103 75 19 chr5 63213596 63213703 -136416447 - L1MB3 LINE L1 -3 6180 6068 1833 161 0 4 chr5 63213882 63214162 -136415988 - AluJo SINE Alu -33 279 1 2290 95 0 0 chr5 63215186 63215480 -136414670 - AluSg SINE Alu -16 294 1 2095 122 7 0 chr5 63215847 63216142 -136414008 + AluSx SINE Alu 1 297 -15 203 175 0 25 chr5 63216600 63216640 -136413510 + CT-rich Low_complexity Low_complexity 4 42 0 1004 241 73 100 chr5 63216641 63217281 -136412869 - L1ME LINE L1 -5380 690 68 2500 64 0 0 chr5 63217585 63217881 -136412269 + AluY SINE Alu 2 297 -14 2308 112 0 6 chr5 63218288 63218601 -136411549 - AluSx SINE Alu -1 311 1 384 301 49 71 chr5 63219041 63219224 -136410926 - L1ME3A LINE L1 0 6170 5992 1983 166 0 0 chr5 63219529 63219824 -136410326 + AluJb SINE Alu 1 295 -17 2044 128 52 27 chr5 63220242 63220608 -136409542 - THE1C LTR MaLR 0 375 1 611 333 26 13 chr5 63220880 63221108 -136409042 + MIR SINE MIR 6 236 -26 2097 99 3 11 chr5 63221323 63221630 -136408520 - AluSx SINE Alu 0 305 1 1629 155 53 7 chr5 63222019 63222303 -136407847 + AluJo SINE Alu 1 297 -15 277 224 53 0 chr5 63222433 63222509 -136407641 + MER116 DNA Mariner 1 80 0 425 311 158 10 chr5 63222551 63222760 -136407390 + MIR SINE MIR 13 252 -10 992 201 36 0 chr5 63222894 63223088 -136407062 - MER105 DNA DNA -3 201 1 760 87 6 0 chr5 63223988 63224094 -136406056 + AluSq/x SINE Alu 2 107 -205 22 0 0 0 chr5 63224094 63224116 -136406034 + AT_rich Low_complexity Low_complexity 1 22 0 23 68 0 0 chr5 63224189 63224233 -136405917 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr5 63224404 63224427 -136405723 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr5 63224486 63224526 -136405624 + AT_rich Low_complexity Low_complexity 1 40 0 1552 206 3 7 chr5 63224968 63225255 -136404895 + AluJo SINE Alu 5 290 -22 871 204 138 5 chr5 63225268 63225464 -136404686 + MER58A DNA MER1_type 1 222 -2 1928 112 51 0 chr5 63225692 63225968 -136404182 + AluSx SINE Alu 1 290 -22 24 53 0 0 chr5 63226093 63226131 -136404019 + AT_rich Low_complexity Low_complexity 1 38 0 522 304 98 0 chr5 63226363 63226567 -136403583 - MIR SINE MIR -10 252 29 821 205 128 5 chr5 63226745 63226940 -136403210 + MER20 DNA MER1_type 1 219 0 2191 99 0 3 chr5 63227436 63227754 -136402396 - AluSx SINE Alu 0 317 1 230 27 81 0 chr5 63227757 63227794 -136402356 + T-rich Low_complexity Low_complexity 2 41 0 1241 210 26 9 chr5 63227873 63228106 -136402044 + MER8 DNA MER2_type 2 238 -1 1925 121 43 0 chr5 63229669 63229951 -136400199 + AluJb SINE Alu 1 294 -18 794 133 0 25 chr5 63230044 63230164 -136399986 + FLAM_C SINE Alu 18 134 -9 2212 107 17 0 chr5 63230414 63230713 -136399437 + AluSp SINE Alu 1 304 -9 2115 114 7 7 chr5 63230929 63231227 -136398923 - AluSx SINE Alu -14 298 1 2344 138 88 9 chr5 63231522 63231941 -136398209 - Tigger2 DNA MER2_type 0 2718 2267 424 125 31 0 chr5 63231928 63231992 -136398158 - Tigger2 DNA MER2_type -2652 66 1 * 1835 150 7 0 chr5 63232622 63232896 -136397254 - AluJo SINE Alu -36 276 1 22 56 0 0 chr5 63233228 63233264 -136396886 + AT_rich Low_complexity Low_complexity 1 36 0 1287 133 14 43 chr5 63233270 63233480 -136396670 + AluJo SINE Alu 85 288 -24 228 146 91 0 chr5 63233486 63233541 -136396609 - L1MA8 LINE L1 -10 6281 6222 586 124 0 0 chr5 63233541 63233630 -136396520 - Tigger4(Zombi) DNA MER2_type 0 2731 2643 2042 127 24 0 chr5 63233668 63233960 -136396190 - AluSq SINE Alu -14 299 1 2152 125 7 0 chr5 63233964 63234260 -136395890 - AluSx SINE Alu -14 298 1 2548 70 0 3 chr5 63234264 63234576 -136395574 - AluY SINE Alu 0 311 1 2081 95 0 42 chr5 63235006 63235290 -136394860 + AluSx SINE Alu 19 290 -22 1143 210 23 5 chr5 63235437 63235651 -136394499 - MER20 DNA MER1_type -1 218 1 2207 106 3 3 chr5 63235895 63236187 -136393963 + AluSx SINE Alu 2 293 -19 188 372 12 12 chr5 63238559 63238645 -136391505 - MIR3 SINE MIR -14 194 109 22 0 0 0 chr5 63238995 63239017 -136391133 + AT_rich Low_complexity Low_complexity 1 22 0 2367 99 0 0 chr5 63240237 63240539 -136389611 + AluSx SINE Alu 1 302 -10 286 160 0 20 chr5 63244120 63244170 -136385980 + L1ME3 LINE L1 6018 6066 -96 22 35 0 0 chr5 63244270 63244299 -136385851 + AT_rich Low_complexity Low_complexity 1 29 0 857 159 8 0 chr5 63244299 63244425 -136385725 + FLAM_A SINE Alu 1 127 -6 1646 162 62 7 chr5 63245218 63245508 -136384642 + AluJb SINE Alu 1 306 -6 2348 94 0 0 chr5 63246060 63246358 -136383792 - AluSq SINE Alu -15 298 1 511 237 88 76 chr5 63246444 63246693 -136383457 + MER112 DNA MER1_type 4 255 -1 7799 112 20 77 chr5 63246712 63246759 -136383391 - HSMAR2 DNA Mariner -6 1296 1248 1493 166 69 31 chr5 63246759 63247048 -136383102 + AluJb SINE Alu 6 305 -7 7799 112 20 77 chr5 63247048 63247258 -136382892 - HSMAR2 DNA Mariner -54 1248 1028 1564 179 14 10 chr5 63247258 63247554 -136382596 + AluJb SINE Alu 1 297 -15 7799 112 20 77 chr5 63247554 63247987 -136382163 - HSMAR2 DNA Mariner -274 1028 572 1994 107 35 24 chr5 63247987 63248277 -136381873 - AluSx SINE Alu -19 293 1 7799 112 20 77 chr5 63248277 63248686 -136381464 - HSMAR2 DNA Mariner -730 572 286 2409 47 0 0 chr5 63248686 63248965 -136381185 - AluY SINE Alu -16 295 17 7799 112 20 77 chr5 63248965 63249234 -136380916 - HSMAR2 DNA Mariner -1016 286 3 198 311 0 0 chr5 63249241 63249286 -136380864 - L2 LINE L2 -675 2639 2595 27 0 0 0 chr5 63249916 63249943 -136380207 + AT_rich Low_complexity Low_complexity 1 27 0 2216 103 0 23 chr5 63250083 63250218 -136379932 + AluSg SINE Alu 1 138 -172 2138 127 3 3 chr5 63250218 63250526 -136379624 + AluSx SINE Alu 1 308 -4 2216 103 0 23 chr5 63250526 63250691 -136379459 + AluSg SINE Alu 138 294 -16 1749 111 4 4 chr5 63250697 63250965 -136379185 + AluSg SINE Alu 40 307 0 21 0 0 0 chr5 63251268 63251289 -136378861 + AT_rich Low_complexity Low_complexity 1 21 0 1734 145 3 27 chr5 63251289 63251586 -136378564 - AluJo SINE Alu -22 290 1 827 168 0 0 chr5 63251586 63251717 -136378433 - AluJo/FLAM SINE Alu -181 131 1 1733 150 32 0 chr5 63251793 63252073 -136378077 - AluJb SINE Alu -13 299 11 318 268 116 12 chr5 63252083 63252227 -136377923 + LTR33 LTR ERVL 11 200 -321 267 153 85 0 chr5 63252233 63252246 -136377904 + LTR33A LTR ERVL 446 456 -67 2097 134 7 0 chr5 63252246 63252552 -136377598 + AluSq SINE Alu 1 308 -5 267 153 85 0 chr5 63252552 63252597 -136377553 + LTR33A LTR ERVL 456 509 -14 2438 92 0 0 chr5 63252607 63252913 -136377237 - AluSc SINE Alu -3 306 1 231 229 0 0 chr5 63254180 63254228 -136375922 - L2 LINE L2 -1 3271 3224 2567 46 0 0 chr5 63255431 63255733 -136374417 + AluY SINE Alu 1 302 -9 265 218 36 0 chr5 63255930 63255985 -136374165 - L2 LINE L2 -2 3311 3255 1700 148 58 0 chr5 63256441 63256718 -136373432 + AluJo SINE Alu 1 293 -19 1486 182 8 0 chr5 63256770 63257028 -136373122 - AluJb SINE Alu -10 302 43 401 104 13 0 chr5 63257494 63257571 -136372579 + (TA)n Simple_repeat Simple_repeat 2 79 0 1749 135 10 47 chr5 63257571 63257867 -136372283 - AluSx SINE Alu -27 285 1 524 162 0 0 chr5 63257912 63257986 -136372164 + AluSg/x SINE Alu 210 283 -29 843 115 0 0 chr5 63257986 63258116 -136372034 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 2071 120 65 0 chr5 63258177 63258469 -136371681 + AluSx SINE Alu 1 311 -1 719 186 145 0 chr5 63258646 63258791 -136371359 - MER93a LTR ERV1 0 402 237 698 88 0 0 chr5 63258789 63258880 -136371270 - MER93b LTR ERV1 -282 91 1 * 1656 195 26 0 chr5 63258991 63259293 -136370857 - AluJb SINE Alu -2 310 1 55 56 0 0 chr5 63259299 63259389 -136370761 + AT_rich Low_complexity Low_complexity 1 90 0 758 167 0 30 chr5 63259389 63259521 -136370629 + FLAM_A SINE Alu 11 138 -4 1096 98 0 93 chr5 63259570 63259764 -136370386 + AluY SINE Alu 133 308 -3 289 290 26 45 chr5 63259824 63259979 -136370171 - L1ME LINE L1 -396 5725 5574 762 93 0 0 chr5 63259980 63260077 -136370073 - AluSg/x SINE Alu -11 299 203 1952 176 148 23 chr5 63260282 63260720 -136369430 - MLT1D LTR MaLR -10 495 3 378 211 211 18 chr5 63260735 63260849 -136369301 + MER5A DNA MER1_type 53 188 -1 2264 99 3 7 chr5 63260852 63261156 -136368994 - AluSp SINE Alu -10 303 1 261 164 29 87 chr5 63261177 63261281 -136368869 - L1ME4a LINE L1 -49 6072 5975 30 27 0 0 chr5 63261372 63261409 -136368741 + AT_rich Low_complexity Low_complexity 1 37 0 2115 107 0 3 chr5 63261409 63261699 -136368451 - AluSx SINE Alu -23 289 1 2236 112 0 0 chr5 63261701 63261996 -136368154 - AluSx SINE Alu -17 295 1 895 250 13 9 chr5 63262134 63262362 -136367788 + MIR SINE MIR 34 262 0 2285 87 0 3 chr5 63262398 63262704 -136367446 - AluSp SINE Alu 0 305 1 25 0 0 0 chr5 63262742 63262767 -136367383 + AT_rich Low_complexity Low_complexity 1 25 0 2138 94 0 0 chr5 63262778 63263092 -136367058 - AluSg SINE Alu 0 318 5 683 203 0 0 chr5 63263103 63263115 -136367035 - FLAM_A SINE Alu -182 120 109 279 0 0 0 chr5 63263115 63263146 -136367004 + (TG)n Simple_repeat Simple_repeat 1 31 0 683 203 0 0 chr5 63263146 63263251 -136366899 - FLAM_A SINE Alu -192 110 3 213 223 259 27 chr5 63265677 63265789 -136364361 - MER5A DNA MER1_type -8 181 44 * 375 254 183 0 chr5 63265694 63265820 -136364330 + MER5A DNA MER1_type 40 188 -1 329 199 174 27 chr5 63265910 63266042 -136364108 - MIR3 SINE MIR -76 132 1 1947 105 14 11 chr5 63266197 63266482 -136363668 - AluSg SINE Alu -11 299 14 2383 86 3 0 chr5 63266497 63266800 -136363350 - AluSp SINE Alu -9 304 1 1712 184 41 61 chr5 63266978 63267202 -136362948 - MLT1B LTR MaLR -7 383 169 2424 77 6 0 chr5 63267202 63267513 -136362637 - AluSq SINE Alu 0 313 1 1712 184 41 61 chr5 63267513 63267679 -136362471 - MLT1B LTR MaLR -221 169 1 1703 166 0 35 chr5 63267748 63268067 -136362083 - AluJb SINE Alu -4 308 1 694 201 22 30 chr5 63268155 63268289 -136361861 - FLAM_A SINE Alu 0 133 1 233 280 121 132 chr5 63268300 63268839 -136361311 + L2 LINE L2 1773 2305 -1009 991 170 13 0 chr5 63269025 63269184 -136360966 - AluSp SINE Alu -13 300 140 2086 118 45 0 chr5 63269196 63269485 -136360665 - AluSq SINE Alu -11 302 1 421 326 28 14 chr5 63269555 63269773 -136360377 - L2 LINE L2 -159 3154 2934 6001 130 147 19 chr5 63269954 63270748 -136359402 - Tigger3b DNA MER2_type -1797 1231 540 1319 214 14 31 chr5 63270748 63271038 -136359112 + AluJo SINE Alu 5 289 -23 2291 96 7 7 chr5 63271041 63271343 -136358807 + AluSq SINE Alu 1 302 -11 6001 130 147 19 chr5 63271343 63271613 -136358537 - Tigger3b DNA MER2_type -2489 539 305 2042 110 3 7 chr5 63271613 63271903 -136358247 - AluJb SINE Alu -13 299 11 6001 130 147 19 chr5 63271903 63271923 -136358227 - Tigger3b DNA MER2_type -2723 305 3 640 317 72 18 chr5 63271953 63272287 -136357863 - L1ME LINE L1 -557 5609 5258 323 321 14 50 chr5 63272543 63272683 -136357467 + MIR3 SINE MIR 22 156 -52 2208 108 14 0 chr5 63273160 63273457 -136356693 - AluSq SINE Alu -12 301 1 466 223 21 88 chr5 63273803 63273996 -136356154 + L2 LINE L2 3134 3313 0 198 354 112 49 chr5 63274339 63274562 -136355588 - L2 LINE L2 -14 3258 3022 380 190 120 10 chr5 63274618 63274718 -136355432 - L1MC5 LINE L1 -60 7901 7791 289 94 16 78 chr5 63274724 63274788 -136355362 - L1MC5 LINE L1 -609 7352 7293 765 143 0 0 chr5 63275059 63275171 -136354979 - AluJb SINE Alu -20 292 181 2438 67 0 0 chr5 63275171 63275471 -136354679 - AluY SINE Alu -11 300 1 1382 142 64 95 chr5 63275475 63275770 -136354380 - AluJo SINE Alu -22 290 5 25 0 0 0 chr5 63275905 63275930 -136354220 + AT_rich Low_complexity Low_complexity 1 25 0 2378 95 0 0 chr5 63276346 63276650 -136353500 - AluSq SINE Alu -9 304 1 2186 125 0 0 chr5 63277137 63277440 -136352710 + AluSq SINE Alu 1 303 -10 51 31 0 0 chr5 63277799 63277864 -136352286 + AT_rich Low_complexity Low_complexity 1 65 0 2308 97 0 7 chr5 63277958 63278268 -136351882 - AluSq SINE Alu -1 312 5 1970 123 0 96 chr5 63278488 63278863 -136351287 + MER1B DNA MER1_type 1 339 0 252 272 97 19 chr5 63278904 63279007 -136351143 + MER20B DNA MER1_type 35 145 -638 789 163 8 16 chr5 63279232 63279361 -136350789 - FLAM_C SINE Alu -5 128 1 2272 103 0 0 chr5 63279374 63279674 -136350476 - AluSg SINE Alu -10 300 1 1448 164 38 38 chr5 63279704 63279997 -136350153 - AluJo SINE Alu -19 293 1 2764 164 57 37 chr5 63280046 63280426 -136349724 - L1MB8 LINE L1 -9 6169 5798 207 88 0 0 chr5 63280426 63280460 -136349690 + (TTTAA)n Simple_repeat Simple_repeat 3 36 0 1932 118 7 44 chr5 63280463 63280620 -136349530 - AluSg SINE Alu -25 285 124 393 22 0 0 chr5 63280620 63280666 -136349484 + (TG)n Simple_repeat Simple_repeat 2 47 0 2177 101 0 3 chr5 63280669 63280955 -136349195 - AluSg SINE Alu -25 285 1 1932 118 7 44 chr5 63280955 63281089 -136349061 - AluSg SINE Alu -188 122 1 2764 164 57 37 chr5 63281089 63281349 -136348801 - L1MB8 LINE L1 -381 5797 5512 1310 176 0 5 chr5 63281433 63281654 -136348496 - AluJb SINE Alu -92 220 1 207 0 0 0 chr5 63281684 63281707 -136348443 + (TTTAA)n Simple_repeat Simple_repeat 4 26 0 2073 102 13 30 chr5 63281713 63282016 -136348134 - AluSx SINE Alu -14 298 1 1910 131 14 10 chr5 63282019 63282309 -136347841 - AluSx SINE Alu -19 293 3 617 149 0 19 chr5 63282309 63282416 -136347734 + LTR38 LTR ERV1 66 170 -386 680 175 0 0 chr5 63282419 63282533 -136347617 - AluSg/x SINE Alu -9 303 190 1637 180 62 40 chr5 63282533 63282692 -136347458 + LTR38 LTR ERV1 166 320 -236 1927 149 4 0 chr5 63282692 63282967 -136347183 + AluSx SINE Alu 1 276 -36 342 0 0 0 chr5 63282967 63283005 -136347145 + (CATA)n Simple_repeat Simple_repeat 4 41 0 1637 180 62 40 chr5 63283005 63283217 -136346933 + LTR38 LTR ERV1 319 546 -10 1910 244 53 9 chr5 63283234 63283758 -136346392 - L1M4b LINE L1 -6302 557 11 518 311 26 26 chr5 63283801 63284110 -136346040 - L1MC4 LINE L1 -544 7498 7190 195 327 0 0 chr5 63284602 63284654 -136345496 + L2 LINE L2 3207 3258 -14 474 308 133 12 chr5 63285078 63285318 -136344832 + L2 LINE L2 2811 3079 -234 1869 143 17 7 chr5 63285332 63285633 -136344517 - AluJo SINE Alu -8 304 1 615 100 56 200 chr5 63285634 63285775 -136344375 + Charlie5 DNA MER1_type 2333 2493 -131 2146 123 0 0 chr5 63285775 63286067 -136344083 + AluSx SINE Alu 1 292 -20 615 100 56 200 chr5 63286067 63286083 -136344067 + Charlie5 DNA MER1_type 2493 2510 -114 1194 107 0 0 chr5 63286083 63286260 -136343890 + (TA)n Simple_repeat Simple_repeat 1 177 0 615 100 56 200 chr5 63286260 63286351 -136343799 + Charlie5 DNA MER1_type 2510 2585 -39 1335 168 78 35 chr5 63286351 63286607 -136343543 + AluJo SINE Alu 1 267 -45 675 203 112 0 chr5 63286627 63286770 -136343380 + FRAM SINE Alu 1 159 -7 2167 98 25 0 chr5 63286779 63287064 -136343086 + AluSx SINE Alu 1 292 -20 463 244 129 38 chr5 63287844 63288131 -136342019 - MER113 DNA MER1_type? -110 411 99 27 29 0 0 chr5 63288612 63288646 -136341504 + AT_rich Low_complexity Low_complexity 1 34 0 2259 103 3 0 chr5 63289503 63289795 -136340355 + AluSq SINE Alu 1 293 -20 2373 103 0 0 chr5 63289810 63290110 -136340040 + AluY SINE Alu 1 300 -11 2414 63 10 3 chr5 63290317 63290619 -136339531 - AluY SINE Alu -7 304 1 526 116 53 32 chr5 63290624 63290719 -136339431 - FLAM_C SINE Alu -11 132 36 237 297 31 0 chr5 63291079 63291143 -136339007 - L2 LINE L2 0 3272 3207 2335 91 0 7 chr5 63291382 63291689 -136338461 - AluSx SINE Alu -7 305 1 2124 119 0 3 chr5 63291713 63292007 -136338143 + AluSx SINE Alu 1 293 -19 2124 120 7 3 chr5 63292228 63292529 -136337621 - AluSp SINE Alu -11 302 1 2350 96 3 6 chr5 63292532 63292846 -136337304 - AluSq SINE Alu 0 313 1 2355 89 0 0 chr5 63292881 63293173 -136336977 - AluSc SINE Alu -17 292 1 2093 94 7 17 chr5 63293606 63293936 -136336214 + AluSq SINE Alu 1 327 0 627 181 0 0 chr5 63294215 63294320 -136335830 + U6 snRNA snRNA 1 105 -2 414 57 0 0 chr5 63294422 63294475 -136335675 + (TG)n Simple_repeat Simple_repeat 1 53 0 573 209 0 0 chr5 63294539 63294649 -136335501 + FLAM_A SINE Alu 25 134 -8 2243 93 10 0 chr5 63295125 63295425 -136334725 - AluY SINE Alu -8 303 1 1959 118 25 0 chr5 63295627 63295906 -136334244 + AluSx SINE Alu 1 286 -26 294 106 0 0 chr5 63295921 63295968 -136334182 + (TA)n Simple_repeat Simple_repeat 2 48 0 1860 140 2 79 chr5 63296494 63296887 -136333263 + MER47A DNA MER2_type 4 366 0 244 270 66 51 chr5 63297194 63297331 -136332819 - L1ME3A LINE L1 -6 6164 6026 939 223 99 44 chr5 63297373 63297720 -136332430 - L1ME3A LINE L1 -554 5608 5281 2095 122 7 3 chr5 63297720 63298015 -136332135 + AluSx SINE Alu 1 296 -16 939 223 99 44 chr5 63298015 63298145 -136332005 - L1ME3A LINE L1 -881 5281 5160 1776 157 10 20 chr5 63298145 63298439 -136331711 - AluJo SINE Alu -21 291 1 939 223 99 44 chr5 63298439 63298576 -136331574 - L1ME3A LINE L1 -1002 5160 4960 1904 141 30 3 chr5 63298614 63298911 -136331239 - AluJb SINE Alu -7 305 1 947 129 0 0 chr5 63298914 63299046 -136331104 - AluJb SINE Alu -180 132 1 552 184 0 0 chr5 63299115 63299213 -136330937 - Tigger7 DNA MER2_type 0 2491 2394 868 247 117 4 chr5 63299216 63299455 -136330695 - Tigger7 DNA MER2_type -2220 267 2 1852 164 0 26 chr5 63299580 63299890 -136330260 - AluJo SINE Alu -10 302 1 194 0 39 0 chr5 63299981 63300007 -136330143 + (TTTAA)n Simple_repeat Simple_repeat 4 30 0 815 179 6 26 chr5 63300083 63300239 -136329911 - FRAM SINE Alu -30 146 1 206 277 31 31 chr5 63300388 63300453 -136329697 + MIR3 SINE MIR 137 201 -7 1020 207 18 31 chr5 63301311 63301538 -136328612 + Tigger3(Golem) DNA MER2_type 2 225 -2804 448 232 0 0 chr5 63301537 63301619 -136328531 + Tigger3(Golem) DNA MER2_type 2943 3024 -5 * 1006 186 180 30 chr5 63302205 63302566 -136327584 - Charlie1 DNA MER1_type -4 2757 2343 274 203 58 29 chr5 63302564 63302633 -136327517 - Charlie1 DNA MER1_type -2690 71 1 * 2179 101 44 3 chr5 63303007 63303305 -136326845 + AluSg SINE Alu 1 310 0 249 33 0 0 chr5 63303693 63303723 -136326427 + (TG)n Simple_repeat Simple_repeat 2 31 0 258 32 0 0 chr5 63303756 63303787 -136326363 + (TG)n Simple_repeat Simple_repeat 1 31 0 1246 185 0 0 chr5 63303793 63303993 -136326157 - AluJo SINE Alu -26 286 87 194 316 118 26 chr5 63304715 63304791 -136325359 - MER5A DNA MER1_type -57 132 50 * 269 323 11 21 chr5 63304726 63304819 -136325331 + MER5A DNA MER1_type 87 178 -11 2335 86 7 10 chr5 63304879 63305183 -136324967 + AluY SINE Alu 1 303 -8 2028 95 14 11 chr5 63306279 63306562 -136323588 + AluSx SINE Alu 14 297 -15 1576 182 0 0 chr5 63306809 63307051 -136323099 - AluSx SINE Alu -70 242 1 1636 138 97 0 chr5 63307060 63307329 -136322821 - AluSx SINE Alu -17 295 1 635 202 0 0 chr5 63307533 63307647 -136322503 - FRAM SINE Alu -62 114 1 2059 82 45 0 chr5 63307838 63308106 -136322044 + AluSg SINE Alu 1 280 -30 1417 202 55 0 chr5 63308233 63308505 -136321645 + AluJo SINE Alu 1 287 -25 2621 36 3 0 chr5 63308893 63309198 -136320952 + AluY SINE Alu 1 306 -5 1832 167 28 0 chr5 63309331 63309619 -136320531 - AluSx SINE Alu -16 296 1 225 0 0 0 chr5 63310408 63310433 -136319717 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2140 110 3 3 chr5 63310576 63310867 -136319283 - AluSg SINE Alu -19 291 1 594 277 151 48 chr5 63310939 63311415 -136318735 - L1MC5 LINE L1 -34 7927 7403 1471 163 101 101 chr5 63312082 63312547 -136317603 - MER31B LTR ERV1 0 466 2 1000 205 58 5 chr5 63312795 63313019 -136317131 - MER46A DNA MER2_type 0 236 1 972 162 32 0 chr5 63313561 63313715 -136316435 - FRAM SINE Alu -17 159 1 212 220 20 0 chr5 63314009 63314059 -136316091 + (TA)n Simple_repeat Simple_repeat 1 51 0 1568 195 14 20 chr5 63314073 63314365 -136315785 - AluJo SINE Alu -20 292 3 2024 125 10 39 chr5 63314403 63314708 -136315442 + AluJb SINE Alu 1 296 -16 2186 114 0 3 chr5 63314847 63315145 -136315005 - AluSx SINE Alu -15 297 1 2226 95 30 0 chr5 63315165 63315460 -136314690 - AluSc SINE Alu -5 304 1 1570 166 26 35 chr5 63315481 63315794 -136314356 - AluJb SINE Alu -2 310 1 2661 214 13 16 chr5 63316735 63317283 -136312867 - REP3 LTR ERV -8 554 9 275 267 25 43 chr5 63317845 63318006 -136312144 - MER112 DNA MER1_type -95 165 8 1268 218 118 11 chr5 63318953 63319233 -136310917 - AluSx SINE Alu -2 310 1 315 300 0 50 chr5 63320100 63320200 -136309950 - L2 LINE L2 -223 3049 2955 431 270 148 16 chr5 63320559 63320765 -136309385 - MIR SINE MIR -25 237 5 211 295 175 55 chr5 63320747 63320947 -136309203 - L3 LINE CR1 -427 1150 927 * 219 270 16 32 chr5 63321061 63321124 -136309026 + MIR SINE MIR 18 79 -129 22 0 0 0 chr5 63321743 63321765 -136308385 + AT_rich Low_complexity Low_complexity 1 22 0 2104 134 13 0 chr5 63321832 63322137 -136308013 - AluSx SINE Alu -3 309 1 23 0 0 0 chr5 63322149 63322172 -136307978 + AT_rich Low_complexity Low_complexity 1 23 0 345 295 88 40 chr5 63322493 63322744 -136307406 - L1ME4a LINE L1 -71 6050 5788 296 235 47 0 chr5 63322905 63322990 -136307160 - L1ME4a LINE L1 -461 5660 5572 431 266 65 16 chr5 63323091 63323215 -136306935 + L2 LINE L2 3184 3313 0 2290 90 7 3 chr5 63323543 63323842 -136306308 - AluSx SINE Alu -12 300 1 2197 192 97 48 chr5 63323990 63324725 -136305425 + Looper DNA T2_type 190 960 -598 532 210 42 12 chr5 63324730 63324897 -136305253 + Looper DNA T2_type 1386 1557 -1 499 258 97 21 chr5 63324958 63325144 -136305006 - L2 LINE L2 -19 3294 3095 463 178 89 0 chr5 63325743 63325833 -136304317 - Tigger7 DNA MER2_type 0 2491 2394 * 1381 189 31 4 chr5 63325832 63326092 -136304058 - Tigger7 DNA MER2_type -2220 267 1 587 191 43 0 chr5 63326105 63326220 -136303930 - FLAM_C SINE Alu -23 120 1 1752 148 46 11 chr5 63326251 63326535 -136303615 + AluJb SINE Alu 1 294 -18 192 270 111 0 chr5 63327030 63327093 -136303057 - L2 LINE L2 -15 3257 3188 556 229 117 114 chr5 63329009 63329191 -136300959 - L1MC5 LINE L1 -104 7857 7677 1892 152 0 3 chr5 63329191 63329480 -136300670 - AluJb SINE Alu -24 288 1 556 229 117 114 chr5 63329480 63329843 -136300307 - L1MC5 LINE L1 -284 7677 7310 18196 61 4 19 chr5 63329948 63331920 -136298230 - L1PA6 LINE L1 0 6154 4238 2560 61 0 10 chr5 63331920 63332231 -136297919 - AluY SINE Alu -3 308 1 18196 61 4 19 chr5 63332231 63333520 -136296630 - L1PA6 LINE L1 -1916 4238 2932 833 235 4 22 chr5 63333571 63333801 -136296349 - L1MC5 LINE L1 -722 7239 7014 26 0 0 0 chr5 63334082 63334108 -136296042 + AT_rich Low_complexity Low_complexity 1 26 0 221 333 17 0 chr5 63335721 63335781 -136294369 - MER91A DNA MER1_type -102 94 34 1675 177 3 39 chr5 63336572 63336883 -136293267 + AluJo SINE Alu 2 301 -11 2379 78 3 0 chr5 63336985 63337293 -136292857 - AluY SINE Alu -2 309 1 30 0 0 0 chr5 63337970 63338000 -136292150 + AT_rich Low_complexity Low_complexity 1 30 0 35 0 0 0 chr5 63338025 63338060 -136292090 + AT_rich Low_complexity Low_complexity 1 35 0 366 188 0 0 chr5 63338060 63338145 -136292005 - L1MA4A LINE L1 -5 6298 6214 996 94 0 0 chr5 63338294 63338421 -136291729 + AluSc SINE Alu 166 292 -17 267 325 36 0 chr5 63339341 63339424 -136290726 + L2 LINE L2 3137 3222 -50 187 303 101 30 chr5 63339462 63339561 -136290589 - L2 LINE L2 -814 2500 2395 1768 169 0 17 chr5 63339735 63340030 -136290120 + AluJb SINE Alu 1 290 -22 24 0 0 0 chr5 63340243 63340267 -136289883 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 63340294 63340315 -136289835 + AT_rich Low_complexity Low_complexity 1 21 0 198 342 125 70 chr5 63340392 63340833 -136289317 - L2 LINE L2 0 3272 2808 23 0 0 0 chr5 63341240 63341263 -136288887 + AT_rich Low_complexity Low_complexity 1 23 0 1045 145 13 0 chr5 63341782 63341934 -136288216 - AluSg/x SINE Alu -22 288 135 236 316 13 0 chr5 63342120 63342199 -136287951 + L2 LINE L2 3234 3313 0 192 353 143 0 chr5 63342303 63342422 -136287728 - L2 LINE L2 0 3272 3137 782 168 165 28 chr5 63342490 63342681 -136287469 + MER33 DNA MER1_type 1 245 -2340 2116 60 0 19 chr5 63342681 63342948 -136287202 - AluY SINE Alu -13 298 37 782 168 165 28 chr5 63342948 63343041 -136287109 + MER33 DNA MER1_type 245 324 0 266 210 284 0 chr5 63343049 63343130 -136287020 - MER5A DNA MER1_type 0 189 86 1574 182 29 4 chr5 63343571 63343851 -136286299 - AluSx SINE Alu -25 287 1 1784 167 7 7 chr5 63344587 63344880 -136285270 - AluSx SINE Alu -16 296 4 1548 214 13 0 chr5 63346481 63346785 -136283365 - AluJb SINE Alu -4 308 1 233 258 97 21 chr5 63346927 63347020 -136283130 + MER103 DNA DNA 4 103 -63 2295 97 7 0 chr5 63347028 63347326 -136282824 + AluSg SINE Alu 7 306 -4 353 303 15 8 chr5 63347658 63347790 -136282360 + (TA)n Simple_repeat Simple_repeat 1 133 0 1515 208 3 3 chr5 63348491 63348780 -136281370 - AluJb SINE Alu -21 291 3 180 0 0 0 chr5 63349040 63349060 -136281090 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1872 137 68 0 chr5 63349621 63349899 -136280251 + AluSx SINE Alu 1 297 -15 3785 125 60 115 chr5 63350124 63350584 -136279566 - Tigger3(Golem) DNA MER2_type -1 3028 2544 828 50 0 0 chr5 63350584 63350685 -136279465 - AluY SINE Alu -5 306 206 3785 125 60 115 chr5 63350685 63351018 -136279132 - Tigger3(Golem) DNA MER2_type -485 2544 2194 1933 159 17 3 chr5 63351018 63351320 -136278830 + AluJb SINE Alu 1 306 -6 3785 125 60 115 chr5 63351320 63351531 -136278619 - Tigger3(Golem) DNA MER2_type -835 2194 1973 1612 191 3 3 chr5 63351531 63351813 -136278337 - AluJo SINE Alu -30 282 1 3785 125 60 115 chr5 63351813 63352020 -136278130 - Tigger3(Golem) DNA MER2_type -1056 1973 1 5631 89 40 52 chr5 63352437 63353613 -136276537 - SVA Other Other -520 866 2 24 0 0 0 chr5 63354150 63354174 -136275976 + AT_rich Low_complexity Low_complexity 1 24 0 2349 105 0 0 chr5 63355263 63355567 -136274583 - AluSx SINE Alu -8 304 1 750 155 44 44 chr5 63355672 63355853 -136274297 - L1MB3 LINE L1 0 6183 6003 2526 63 0 0 chr5 63355890 63356189 -136273961 + AluY SINE Alu 1 299 -12 2352 89 0 0 chr5 63356374 63356676 -136273474 - AluSp SINE Alu -11 302 1 1906 132 3 63 chr5 63356995 63357137 -136273013 + AluSx SINE Alu 1 150 -162 2283 92 0 3 chr5 63357137 63357429 -136272721 + AluSc SINE Alu 1 291 -18 1906 132 3 63 chr5 63357429 63357604 -136272546 + AluSx SINE Alu 150 299 -13 297 250 14 0 chr5 63357804 63357876 -136272274 - L2 LINE L2 0 3272 3200 310 282 126 31 chr5 63358265 63358520 -136271630 - HAL1 LINE L1 -47 2460 2182 2339 233 20 39 chr5 63358639 63359248 -136270902 - MLT1E3 LTR MaLR -27 597 1 5381 60 32 0 chr5 63359348 63360036 -136270114 - L1PA5 LINE L1 0 6154 5445 1940 267 76 37 chr5 63360057 63361072 -136269078 - HAL1 LINE L1 -629 1878 825 408 229 29 137 chr5 63361171 63361261 -136268889 - HAL1 LINE L1 -1667 840 777 2183 122 0 0 chr5 63361261 63361557 -136268593 - AluSx SINE Alu -16 296 1 408 229 29 137 chr5 63361557 63361641 -136268509 - HAL1 LINE L1 -1730 777 685 345 333 59 18 chr5 63361682 63361904 -136268246 - HAL1 LINE L1 -1961 546 316 634 259 69 35 chr5 63361964 63362253 -136267897 - HAL1 LINE L1 -2189 318 20 420 229 76 15 chr5 63362876 63363007 -136267143 - L1MD2 LINE L1 0 6359 6221 310 217 90 0 chr5 63363248 63363326 -136266824 + L1MD2 LINE L1 6224 7946 -49 366 190 21 13 chr5 63363626 63363726 -136266424 + L1MA9 LINE L1 6017 6123 -168 1478 211 0 14 chr5 63364372 63364656 -136265494 - AluJo SINE Alu -32 280 1 942 252 32 5 chr5 63366235 63366453 -136263697 - MER58A DNA MER1_type 0 224 1 418 307 62 22 chr5 63366827 63367006 -136263144 + MIR SINE MIR 32 217 -45 * 1054 286 214 41 chr5 63366977 63367895 -136262255 - L2 LINE L2 -1066 2248 1173 526 238 79 28 chr5 63367899 63368151 -136261999 - L1M4 LINE L1 -2880 3266 3002 1220 198 4 36 chr5 63369203 63369450 -136260700 + MER8 DNA MER2_type 1 239 0 1417 150 33 0 chr5 63369855 63370095 -136260055 - L1PA16 LINE L1 -10 6156 5909 859 199 31 0 chr5 63370150 63370311 -136259839 - AluJo/FRAM SINE Alu -12 300 135 1734 133 34 0 chr5 63370311 63370575 -136259575 - AluSq SINE Alu -15 298 26 2087 117 0 0 chr5 63371319 63371630 -136258520 - AluSx SINE Alu 0 311 1 227 200 0 0 chr5 63371703 63371738 -136258412 + MIR SINE MIR 207 241 -21 22 80 0 0 chr5 63371892 63371942 -136258208 + AT_rich Low_complexity Low_complexity 1 50 0 2270 113 3 3 chr5 63372174 63372485 -136257665 - AluSp SINE Alu -2 311 1 22 0 0 0 chr5 63372504 63372526 -136257624 + AT_rich Low_complexity Low_complexity 1 22 0 1143 204 126 11 chr5 63372675 63372945 -136257205 + AluJo SINE Alu 1 301 -1 881 198 125 0 chr5 63373612 63373804 -136256346 - MER20 DNA MER1_type 0 219 4 261 0 0 0 chr5 63373991 63374020 -136256130 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 366 23 0 0 chr5 63375380 63375423 -136254727 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 400 208 0 0 chr5 63375423 63375500 -136254650 - FRAM SINE Alu -20 146 70 26 50 0 0 chr5 63375767 63375807 -136254343 + AT_rich Low_complexity Low_complexity 1 40 0 22 70 0 0 chr5 63376266 63376309 -136253841 + AT_rich Low_complexity Low_complexity 1 43 0 233 286 0 0 chr5 63376486 63376549 -136253601 - MER5A DNA MER1_type -118 71 9 266 233 35 9 chr5 63376744 63376860 -136253290 + (TA)n Simple_repeat Simple_repeat 2 120 0 706 74 0 0 chr5 63376901 63376996 -136253154 + L1PA6 LINE L1 6055 6149 -5 1543 170 31 52 chr5 63377298 63377681 -136252469 + THE1C LTR MaLR 1 375 0 719 174 17 0 chr5 63377687 63377802 -136252348 + Tigger3(Golem) DNA MER2_type 2912 3028 -1 1135 239 41 33 chr5 63378057 63378425 -136251725 - MLT1C LTR MaLR 0 467 97 207 250 36 18 chr5 63379227 63379283 -136250867 + MIR3 SINE MIR 112 168 -40 825 262 53 0 chr5 63379542 63379767 -136250383 + MIR SINE MIR 3 239 -23 2358 84 3 0 chr5 63380056 63380354 -136249796 + AluSp SINE Alu 2 300 -13 2015 157 0 3 chr5 63380365 63380665 -136249485 + AluJb SINE Alu 3 301 -11 343 319 8 34 chr5 63380897 63381016 -136249134 + AluJb SINE Alu 2 117 -185 697 82 0 0 chr5 63381028 63381126 -136249024 - AluSp/q SINE Alu 0 313 216 21 36 0 0 chr5 63381491 63381519 -136248631 + AT_rich Low_complexity Low_complexity 1 28 0 590 286 86 16 chr5 63381903 63382148 -136248002 - MIR SINE MIR 0 262 1 6268 50 0 5 chr5 63382210 63383024 -136247126 - L1PA5 LINE L1 -2554 3592 2783 14323 44 6 0 chr5 63383025 63385572 -136244578 + L1PA5 LINE L1 3596 6151 -3 485 273 35 48 chr5 63386810 63387041 -136243109 - HAL1 LINE L1 -4 2503 2276 681 239 151 4 chr5 63387081 63387320 -136242830 - HAL1 LINE L1 -344 2163 1890 * 791 277 84 61 chr5 63387317 63387922 -136242228 - HAL1 LINE L1 -1010 1497 23 264 356 34 13 chr5 63388280 63388429 -136241721 + MER20 DNA MER1_type 3 154 -65 557 265 36 18 chr5 63388496 63388662 -136241488 + L2 LINE L2 352 520 -2794 681 77 11 0 chr5 63389845 63389936 -136240214 + AluSg/x SINE Alu 203 294 -15 207 167 21 21 chr5 63389983 63390031 -136240119 + (TA)n Simple_repeat Simple_repeat 1 48 0 2417 73 3 0 chr5 63390809 63391109 -136239041 + AluY SINE Alu 1 301 -10 714 152 0 32 chr5 63391431 63391556 -136238594 - FLAM_C SINE Alu -1 142 22 5543 162 29 41 chr5 63391788 63392283 -136237867 - L1MA5A LINE L1 -3 6294 5795 390 21 0 0 chr5 63392283 63392330 -136237820 + (TG)n Simple_repeat Simple_repeat 1 47 0 5543 162 29 41 chr5 63392330 63392718 -136237432 - L1MA5A LINE L1 -502 5795 5404 1915 116 79 0 chr5 63392718 63392995 -136237155 - AluSx SINE Alu -12 300 2 5543 162 29 41 chr5 63392995 63393699 -136236451 - L1MA5A LINE L1 -893 5404 4738 1924 146 4 0 chr5 63393699 63393980 -136236170 - AluSx SINE Alu -30 282 1 5543 162 29 41 chr5 63393980 63394259 -136235891 - L1MA5A LINE L1 -1559 4738 4457 1360 203 10 57 chr5 63394298 63394445 -136235705 - AluJo SINE Alu -30 282 130 378 0 0 0 chr5 63394445 63394487 -136235663 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2152 100 0 0 chr5 63394487 63394768 -136235382 - AluY SINE Alu -30 281 1 1360 203 10 57 chr5 63394768 63394915 -136235235 - AluJo SINE Alu -180 132 1 1037 144 0 0 chr5 63395146 63395321 -136234829 + AluSg/x SINE Alu 139 313 0 445 203 23 8 chr5 63395421 63395644 -136234506 + AluJo SINE Alu 1 291 -21 23 78 0 0 chr5 63395645 63395696 -136234454 + AT_rich Low_complexity Low_complexity 1 51 0 2394 76 3 0 chr5 63396156 63396447 -136233703 - AluSp SINE Alu -20 293 2 31 26 0 0 chr5 63397722 63397760 -136232390 + AT_rich Low_complexity Low_complexity 1 38 0 2006 157 32 13 chr5 63397822 63398197 -136231953 - Tigger1 DNA MER2_type -15 2403 2022 264 105 0 0 chr5 63398194 63398232 -136231918 + Tigger1 DNA MER2_type 1942 1979 -439 * 1116 110 25 123 chr5 63398369 63398605 -136231545 - Tigger1 DNA MER2_type -412 2006 1794 2368 104 3 0 chr5 63398605 63398913 -136231237 + AluSq SINE Alu 1 309 -4 656 248 64 54 chr5 63398946 63399244 -136230906 - LTR47B LTR ERVL -142 301 1 1790 180 34 0 chr5 63399250 63399573 -136230577 - MLT2C1 LTR ERVL -63 334 1 2181 150 0 15 chr5 63401302 63401643 -136228507 - MER1B DNA MER1_type 0 337 2 528 295 64 39 chr5 63401806 63402040 -136228110 - MIR SINE MIR -21 241 2 1399 144 204 3 chr5 63402506 63402805 -136227345 - MER46B DNA MER2_type -1 235 2 873 172 15 78 chr5 63403533 63403737 -136226413 - MER20 DNA MER1_type -25 194 4 671 260 66 11 chr5 63403813 63403994 -136226156 + MIR SINE MIR 17 207 -55 2046 123 3 7 chr5 63404173 63404480 -136225670 + AluSx SINE Alu 1 306 0 340 235 121 34 chr5 63404481 63404630 -136225520 - L1M1 LINE L1 -4239 3326 3165 * 5101 103 5 6 chr5 63404623 63405401 -136224749 - L1PA8 LINE L1 0 6172 5353 1938 158 0 16 chr5 63405421 63405724 -136224426 + AluSx SINE Alu 1 298 -14 680 195 0 8 chr5 63405839 63405962 -136224188 - FLAM_A SINE Alu -11 122 1 2767 190 78 29 chr5 63405962 63406443 -136223707 - L1M1 LINE L1 -4486 3079 2623 246 81 0 0 chr5 63406443 63406480 -136223670 + (TTA)n Simple_repeat Simple_repeat 2 38 0 2767 190 78 29 chr5 63406480 63406524 -136223626 - L1M1 LINE L1 -4942 2623 2583 2289 104 3 0 chr5 63406524 63406832 -136223318 - AluSp SINE Alu -4 309 1 2767 190 78 29 chr5 63406832 63406913 -136223237 - L1M1 LINE L1 -4982 2583 2507 1926 159 7 0 chr5 63406913 63406932 -136223218 - AluJb SINE Alu -12 300 283 216 0 0 0 chr5 63406932 63406956 -136223194 + (ATTG)n Simple_repeat Simple_repeat 4 27 0 1926 159 7 0 chr5 63406956 63407232 -136222918 - AluJb SINE Alu -29 283 3 2767 190 78 29 chr5 63407232 63407375 -136222775 - L1M1 LINE L1 -5058 2507 2291 1371 106 0 5 chr5 63407380 63407568 -136222582 + AluSg/x SINE Alu 120 306 -6 1647 244 92 19 chr5 63407568 63408080 -136222070 - L1M1 LINE L1 -5283 2282 1734 1080 221 3 83 chr5 63408139 63408451 -136221699 - L1M1 LINE L1 -6737 752 466 231 36 0 0 chr5 63410127 63410155 -136219995 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 374 330 97 19 chr5 63410234 63410440 -136219710 + MIR SINE MIR 35 256 -6 241 324 119 38 chr5 63410549 63410659 -136219491 - MIR SINE MIR 0 262 162 2290 91 7 0 chr5 63410659 63410956 -136219194 - AluSx SINE Alu -13 299 1 241 324 119 38 chr5 63410956 63411055 -136219095 - MIR SINE MIR -100 162 36 435 38 0 0 chr5 63411506 63411559 -136218591 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 1723 171 0 7 chr5 63411566 63411853 -136218297 - AluJb SINE Alu -27 285 1 840 99 221 0 chr5 63412027 63412158 -136217992 - AluY SINE Alu -22 289 130 511 248 28 14 chr5 63412169 63412314 -136217836 + MIR SINE MIR 103 249 -13 381 337 57 42 chr5 63412849 63413042 -136217108 - L3 LINE CR1 -16 1561 1366 531 224 40 61 chr5 63414155 63414481 -136215669 - L1MC4 LINE L1 0 8042 7550 566 219 118 29 chr5 63414564 63414793 -136215357 - L1MC4 LINE L1 -353 7535 7217 1588 199 29 0 chr5 63415479 63415760 -136214390 + AluJb SINE Alu 1 289 -23 441 257 248 5 chr5 63420474 63420684 -136209466 - MIR SINE MIR 0 262 2 792 315 174 24 chr5 63420709 63421509 -136208641 - L2 LINE L2 -76 3196 2255 24 77 0 0 chr5 63423063 63423115 -136207035 + AT_rich Low_complexity Low_complexity 1 52 0 1848 151 0 49 chr5 63423285 63423609 -136206541 + AluJb SINE Alu 1 308 -4 216 86 0 0 chr5 63423697 63423732 -136206418 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 676 347 47 47 chr5 63424457 63424950 -136205200 - L2 LINE L2 -446 2868 2376 1759 109 4 0 chr5 63425499 63425737 -136204413 + AluSp SINE Alu 60 298 -15 324 0 0 0 chr5 63425737 63425773 -136204377 + (TA)n Simple_repeat Simple_repeat 2 37 0 493 185 79 34 chr5 63426457 63426635 -136203515 + Charlie1 DNA MER1_type 2569 2754 -7 469 248 9 9 chr5 63426745 63426858 -136203292 - MIR SINE MIR -100 162 50 672 163 33 77 chr5 63478646 63478791 -136151359 - L1MC/D LINE L1 -743 5403 5329 933 195 6 0 chr5 63478791 63478955 -136151195 - FAM SINE Alu -8 167 3 672 163 33 77 chr5 63478955 63479124 -136151026 - L1MC/D LINE L1 -817 5329 5154 2253 111 0 0 chr5 63479713 63480010 -136150140 - AluSp SINE Alu -16 297 1 2639 102 5 3 chr5 63480428 63480802 -136149348 - THE1C LTR MaLR 0 375 1 209 372 0 0 chr5 63481140 63481226 -136148924 - MIR3 SINE MIR -15 193 108 863 148 0 8 chr5 63481227 63481355 -136148795 + AluSq/x SINE Alu 1 127 -186 1455 216 30 71 chr5 63481807 63482339 -136147811 - MLT2B1 LTR ERVL -10 510 1 273 298 48 8 chr5 63482578 63482702 -136147448 - L2 LINE L2 -528 2786 2658 398 241 96 42 chr5 63482713 63482879 -136147271 + MER5A DNA MER1_type 15 189 0 1788 145 13 45 chr5 63483635 63483945 -136146205 + AluJo SINE Alu 1 300 -12 273 257 64 18 chr5 63484069 63484178 -136145972 - L2 LINE L2 -543 2771 2658 1990 191 13 0 chr5 63484986 63485373 -136144777 - MER57A LTR ERV1 -11 392 1 23 0 0 0 chr5 63485436 63485459 -136144691 + AT_rich Low_complexity Low_complexity 1 23 0 445 288 58 58 chr5 63485703 63485960 -136144190 - MLT1L LTR MaLR -313 302 46 186 43 0 0 chr5 63486032 63486055 -136144095 + (CTTG)n Simple_repeat Simple_repeat 1 23 0 1034 100 0 22 chr5 63486055 63486235 -136143915 + (TTTC)n Simple_repeat Simple_repeat 2 177 0 2059 129 0 0 chr5 63486236 63486515 -136143635 - AluSx SINE Alu -33 279 1 704 188 42 14 chr5 63486734 63486878 -136143272 + MER5A DNA MER1_type 42 189 0 1825 149 0 24 chr5 63487727 63488016 -136142134 - AluSx SINE Alu -30 282 1 24 53 0 0 chr5 63489395 63489433 -136140717 + AT_rich Low_complexity Low_complexity 1 38 0 203 213 21 0 chr5 63489585 63489632 -136140518 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 223 258 61 0 chr5 63490156 63490222 -136139928 + MIR SINE MIR 100 169 -93 402 220 91 38 chr5 63490490 63490622 -136139528 + MIR3 SINE MIR 45 183 -25 4245 147 75 5 chr5 63490688 63491465 -136138685 - MER6 DNA MER2_type -1 864 34 1968 137 26 15 chr5 63491484 63491827 -136138323 + MER7A DNA MER2_type 1 345 -1 215 30 0 30 chr5 63491864 63491897 -136138253 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1957 135 0 7 chr5 63491899 63492180 -136137970 - AluSx SINE Alu -33 279 1 257 0 30 0 chr5 63493383 63493416 -136136734 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1465 202 29 4 chr5 63493419 63493696 -136136454 - AluJo SINE Alu -24 288 5 587 191 0 0 chr5 63493723 63493838 -136136312 - L1MA8 LINE L1 -1 6290 6176 2009 149 7 7 chr5 63493868 63494176 -136135974 + AluJb SINE Alu 1 308 -4 1350 92 0 6 chr5 63494224 63494398 -136135752 + AluY SINE Alu 1 173 -138 2019 88 9 82 chr5 63495542 63495861 -136134289 - AluSx SINE Alu -16 296 1 312 259 36 71 chr5 63496065 63496177 -136133973 - MER5B DNA MER1_type -69 109 2 1647 182 48 3 chr5 63496402 63496753 -136133397 - L1MC1 LINE L1 -70 6263 5897 1001 273 98 44 chr5 63496771 63497181 -136132969 + MLT2F LTR ERVL 171 602 -61 330 279 0 0 chr5 63497206 63497274 -136132876 + L2 LINE L2 3205 3272 0 294 188 47 47 chr5 63497269 63497354 -136132796 - L2 LINE L2 -55 3217 3133 * 2472 174 86 18 chr5 63499949 63500575 -136129575 + Charlie1 DNA MER1_type 2087 2755 -6 493 267 21 31 chr5 63500576 63500767 -136129383 - L1MC1 LINE L1 -2049 5759 5571 417 270 49 60 chr5 63500813 63500998 -136129152 - L1MC1 LINE L1 -2345 5463 5281 354 180 0 0 chr5 63501010 63501071 -136129079 + MLT1G1 LTR MaLR 3 63 -532 1173 185 5 5 chr5 63501235 63501440 -136128710 - AluJo SINE Alu -106 206 2 671 250 94 22 chr5 63501441 63501784 -136128366 + MLT1G1 LTR MaLR 33 450 -145 407 275 97 43 chr5 63502203 63502340 -136127810 + MER20 DNA MER1_type 2 155 -64 3529 158 118 32 chr5 63502340 63503100 -136127050 - LTR1B LTR ERV1 0 826 1 407 275 97 43 chr5 63503100 63503169 -136126981 + MER20 DNA MER1_type 155 219 0 230 179 0 0 chr5 63503259 63503298 -136126852 - L2 LINE L2 -6 3307 3269 305 160 0 93 chr5 63503338 63503413 -136126737 + MLT1D LTR MaLR 1 68 -437 1302 151 79 6 chr5 63503416 63503782 -136126368 - LTR54B LTR ERV1 0 498 73 224 278 14 0 chr5 63503876 63503948 -136126202 + GA-rich Low_complexity Low_complexity 1 73 0 22 70 0 0 chr5 63504218 63504261 -136125889 + AT_rich Low_complexity Low_complexity 1 43 0 1994 129 41 0 chr5 63504291 63504585 -136125565 + AluSg SINE Alu 1 306 -4 24 67 0 0 chr5 63505456 63505501 -136124649 + AT_rich Low_complexity Low_complexity 1 45 0 382 332 102 5 chr5 63505829 63506025 -136124125 + L1M4 LINE L1 2607 2821 -3325 456 68 0 0 chr5 63506593 63506652 -136123498 + AluYb8 SINE Alu 125 183 -135 1772 137 27 24 chr5 63506788 63507081 -136123069 + AluSx SINE Alu 1 294 -18 237 222 0 0 chr5 63507123 63507168 -136122982 + CT-rich Low_complexity Low_complexity 3 47 0 2320 73 0 20 chr5 63507412 63507714 -136122436 + AluY SINE Alu 1 296 -15 2426 130 54 29 chr5 63507885 63508078 -136122072 - MER4E LTR ERV1 0 779 592 2551 63 0 0 chr5 63508078 63508381 -136121769 + AluY SINE Alu 1 303 -8 2426 130 54 29 chr5 63508381 63508777 -136121373 - MER4E LTR ERV1 -187 592 1 247 233 17 17 chr5 63508858 63508918 -136121232 - MLT1J2 LTR MaLR -276 174 115 1554 155 114 38 chr5 63509090 63509458 -136120692 - MER61B LTR ERV1 -29 396 1 664 239 72 6 chr5 63510030 63510197 -136119953 + MER5B DNA MER1_type 1 178 0 3844 91 7 115 chr5 63511274 63511474 -136118676 - MER41B LTR ERV1 0 635 415 1726 116 110 38 chr5 63511474 63511766 -136118384 - AluSq SINE Alu 0 313 1 3844 91 7 115 chr5 63511766 63511873 -136118277 - MER41B LTR ERV1 -220 415 298 2399 102 3 0 chr5 63511873 63512177 -136117973 - AluSp SINE Alu -8 305 1 3844 91 7 115 chr5 63512177 63512546 -136117604 - MER41B LTR ERV1 -337 298 36 2340 67 13 3 chr5 63512546 63512844 -136117306 + AluY SINE Alu 1 301 -10 3844 91 7 115 chr5 63512844 63512877 -136117273 - MER41B LTR ERV1 -599 36 1 1059 166 14 93 chr5 63513735 63513861 -136116289 - L1MD3 LINE L1 0 7995 7903 2425 97 0 0 chr5 63513861 63514171 -136115979 - AluSg SINE Alu 0 310 1 1059 166 14 93 chr5 63514171 63514333 -136115817 - L1MD3 LINE L1 -92 7903 7730 230 369 138 15 chr5 63517341 63517471 -136112679 - L2 LINE L2 0 3272 3127 649 236 67 116 chr5 63517951 63518346 -136111804 - L1MC4 LINE L1 -40 8002 7648 1812 148 14 7 chr5 63518346 63518637 -136111513 - AluJb SINE Alu -19 293 1 649 236 67 116 chr5 63518637 63518868 -136111282 - L1MC4 LINE L1 -394 7648 7407 2225 95 3 3 chr5 63518916 63519212 -136110938 - AluSg SINE Alu -14 296 1 1126 146 0 0 chr5 63519476 63519641 -136110509 + AluSp SINE Alu 134 298 -15 2322 93 0 22 chr5 63520734 63521046 -136109104 - AluY SINE Alu -6 305 1 314 271 28 19 chr5 63521768 63521875 -136108275 - MIR3 SINE MIR -13 195 88 302 0 26 0 chr5 63521898 63521936 -136108214 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2035 115 11 0 chr5 63521938 63522216 -136107934 - AluSx SINE Alu -31 281 1 1754 143 11 21 chr5 63522223 63522534 -136107616 - AluSx SINE Alu 0 308 1 2543 62 0 0 chr5 63522547 63522854 -136107296 - AluY SINE Alu -3 308 2 1149 197 196 11 chr5 63522889 63523475 -136106675 - L1MCa LINE L1 -4199 2365 1584 1997 131 53 0 chr5 63523475 63523795 -136106355 + MER1B DNA MER1_type 1 337 -2 180 0 0 0 chr5 63523830 63523850 -136106300 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1486 212 104 108 chr5 63523854 63524064 -136106086 - L1MCa LINE L1 -5351 1213 1004 2209 67 6 91 chr5 63524064 63524395 -136105755 - AluSq SINE Alu -10 303 1 1486 212 104 108 chr5 63524395 63525182 -136104968 - L1MCa LINE L1 -5560 1004 4 456 256 172 57 chr5 63525353 63525841 -136104309 - L1ME4a LINE L1 -1 6120 5577 2256 81 0 39 chr5 63525894 63526204 -136103946 - AluY SINE Alu -13 298 1 1806 153 56 39 chr5 63526392 63526751 -136103399 + MLT1A1 LTR MaLR 1 365 0 308 250 54 43 chr5 63526781 63526873 -136103277 + MIR SINE MIR 97 189 -73 455 255 66 131 chr5 63526878 63527345 -136102805 - L2 LINE L2 0 3272 2836 252 283 113 65 chr5 63527566 63527813 -136102337 - L2 LINE L2 -2271 1043 785 248 167 0 0 chr5 63527911 63527953 -136102197 + L2 LINE L2 3213 3254 -18 2159 183 23 54 chr5 63528303 63528581 -136101569 - MLT1C LTR MaLR 0 467 209 2360 114 0 0 chr5 63528581 63528889 -136101261 - AluSx SINE Alu -4 308 1 2159 183 23 54 chr5 63528889 63529092 -136101058 - MLT1C LTR MaLR -258 209 1 246 229 164 120 chr5 63529742 63529815 -136100335 + MIR SINE MIR 17 85 -177 1905 209 72 27 chr5 63529815 63530298 -136099852 + MLT1D LTR MaLR 1 505 0 246 229 164 120 chr5 63530298 63530407 -136099743 + MIR SINE MIR 85 207 -55 344 241 136 56 chr5 63530547 63530709 -136099441 + MER5A DNA MER1_type 15 189 0 1341 248 79 22 chr5 63531841 63532285 -136097865 + MER70A LTR ERVL 4 472 0 2740 136 30 7 chr5 63532412 63532853 -136097297 + LTR32 LTR ERVL 21 471 0 1446 166 44 78 chr5 63533207 63533503 -136096647 - AluJo SINE Alu -26 286 1 2348 158 54 0 chr5 63534152 63534557 -136095593 - MSTA LTR MaLR 0 428 2 650 246 127 18 chr5 63535664 63535892 -136094258 - MIR SINE MIR -6 256 4 288 0 0 0 chr5 63537088 63537120 -136093030 + (CA)n Simple_repeat Simple_repeat 2 33 0 247 269 62 31 chr5 63537123 63537253 -136092897 - L2 LINE L2 -182 3131 2998 1644 184 5 70 chr5 63537299 63537684 -136092466 + MLT1A2 LTR MaLR 1 360 -14 236 270 36 58 chr5 63537937 63538074 -136092076 + MER94 DNA DNA 1 134 0 828 219 84 9 chr5 63538434 63538649 -136091501 + MIR SINE MIR 31 261 -1 1335 153 23 9 chr5 63538664 63538880 -136091270 - AluJb SINE Alu -18 294 76 883 286 174 15 chr5 63539463 63539854 -136090296 - MLT1K LTR MaLR -2 586 134 492 189 0 0 chr5 63540124 63540214 -136089936 - AluJo SINE Alu 0 312 223 210 262 0 0 chr5 63540863 63540905 -136089245 + T-rich Low_complexity Low_complexity 1 42 0 331 172 0 31 chr5 63540921 63540985 -136089165 - AluJo SINE Alu -20 282 221 236 255 206 20 chr5 63540965 63541067 -136089083 - MLT1K LTR MaLR -319 269 149 * 1440 171 4 12 chr5 63541073 63541313 -136088837 - AluJo SINE Alu -74 238 1 2207 117 3 3 chr5 63542044 63542353 -136087797 - AluSx SINE Alu -1 311 3 726 272 9 22 chr5 63542389 63542613 -136087537 + MIR SINE MIR 42 262 0 474 18 0 0 chr5 63543199 63543254 -136086896 + (TG)n Simple_repeat Simple_repeat 2 56 0 410 206 28 57 chr5 63543276 63543417 -136086733 - L1ME4a LINE L1 -1 6120 5984 40772 50 1 2 chr5 63543517 63548501 -136081649 + L1P LINE L1 1 4977 -1169 5038 142 43 5 chr5 63548602 63549398 -136080752 + LTR1B LTR ERV1 1 826 0 1902 89 19 70 chr5 63549575 63549890 -136080260 - AluSg1 SINE Alu -8 301 3 849 150 111 97 chr5 63549893 63549955 -136080195 - MER46B DNA MER2_type -2627 104 159 2258 112 0 3 chr5 63549955 63550251 -136079899 - AluSx SINE Alu -17 295 1 849 150 111 97 chr5 63550251 63550414 -136079736 - MER46B DNA MER2_type -2571 160 1 379 279 32 64 chr5 63550539 63550623 -136079527 + L1MEd LINE L1 620 705 -5414 1903 150 13 7 chr5 63550623 63550923 -136079227 + AluJb SINE Alu 1 302 -10 379 279 32 64 chr5 63550923 63551089 -136079061 + L1MEd LINE L1 705 862 -5257 1875 127 45 27 chr5 63551215 63551507 -136078643 - AluSx SINE Alu -15 297 1 1257 183 5 0 chr5 63552288 63552496 -136077654 - AluJb SINE Alu -94 218 10 2583 64 0 10 chr5 63552527 63552840 -136077310 + AluSg SINE Alu 1 310 0 1357 156 228 57 chr5 63552924 63553257 -136076893 - MLT1B LTR MaLR 0 390 1 247 171 66 40 chr5 63553262 63553338 -136076812 + L1ME4a LINE L1 6040 6117 -4 656 234 84 0 chr5 63553932 63554099 -136076051 + MIR SINE MIR 16 196 -66 353 312 55 12 chr5 63554309 63554475 -136075675 - MIR3 SINE MIR -11 197 19 1030 54 16 0 chr5 63554654 63554783 -136075367 - L1PA5 LINE L1 -260 5894 5764 1096 28 21 14 chr5 63554789 63554932 -136075218 + L1PA4 LINE L1 6012 6155 0 22 35 0 0 chr5 63555086 63555115 -136075035 + AT_rich Low_complexity Low_complexity 1 29 0 1235 14 0 7 chr5 63555200 63555343 -136074807 - L1PA2 LINE L1 -1 6154 6013 4537 12 6 4 chr5 63555443 63555962 -136074188 - L1PA2 LINE L1 -134 6021 5502 368 39 0 0 chr5 63555962 63556014 -136074136 + L1P LINE L1 5256 5307 -848 338 321 100 15 chr5 63556042 63556382 -136073768 - L1ME4a LINE L1 -225 5896 5491 44433 43 1 1 chr5 63558806 63564956 -136065194 - L1PA4 LINE L1 0 6155 4 278 300 196 33 chr5 63565047 63565317 -136064833 - MLT1I LTR MaLR 0 409 96 1718 160 32 4 chr5 63565406 63565687 -136064463 + AluJo SINE Alu 3 291 -21 2321 239 44 17 chr5 63565894 63566481 -136063669 - LTR26 LTR ERV1 0 603 1 724 219 291 31 chr5 63566555 63566906 -136063244 + MLT1H LTR MaLR 108 549 0 511 241 50 41 chr5 63567483 63567714 -136062436 - MLT1J2 LTR MaLR -240 210 8 1855 135 31 10 chr5 63568592 63568881 -136061269 + AluSq SINE Alu 3 297 -16 452 319 81 6 chr5 63569333 63569534 -136060616 - MIR SINE MIR -15 247 31 198 0 0 0 chr5 63570184 63570206 -136059944 + (GGA)n Simple_repeat Simple_repeat 2 23 0 208 228 11 10 chr5 63570330 63570414 -136059736 + L2 LINE L2 3137 3310 -3 239 239 15 176 chr5 63570570 63570704 -136059446 - MER5B DNA MER1_type -6 172 81 2207 112 3 0 chr5 63570704 63570998 -136059152 - AluSx SINE Alu -17 295 1 239 239 15 176 chr5 63570998 63571068 -136059082 - MER5B DNA MER1_type -97 81 1 1732 232 78 7 chr5 63572010 63572433 -136057717 - LTR40b LTR ERVL 0 462 10 630 260 150 27 chr5 63572559 63572859 -136057291 - MLT1H LTR MaLR 0 549 213 317 164 0 2 chr5 63572928 63572986 -136057164 - MLT2C1 LTR ERVL 0 663 464 205 200 50 0 chr5 63572995 63573055 -136057095 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 2140 113 3 20 chr5 63573055 63573347 -136056803 - AluSx SINE Alu -25 287 1 867 231 53 93 chr5 63573357 63573712 -136056438 - MLT2C1 LTR ERVL -56 341 1 261 213 0 53 chr5 63574140 63574215 -136055935 + (CATATA)n Simple_repeat Simple_repeat 5 75 0 1924 128 10 55 chr5 63574409 63574721 -136055429 - AluJo SINE Alu -12 300 3 2025 145 0 3 chr5 63575291 63575580 -136054570 + AluJb SINE Alu 20 307 -5 404 289 90 0 chr5 63575958 63576114 -136054036 + MER21B LTR ERV1 330 499 -364 4785 47 12 0 chr5 63577096 63577669 -136052481 - LTR10C LTR ERV1 -1 590 11 220 329 104 24 chr5 63577700 63577864 -136052286 - MIR3 SINE MIR 0 208 32 1544 149 117 14 chr5 63577897 63578179 -136051971 - AluJb SINE Alu -1 311 1 183 42 0 0 chr5 63578270 63578294 -136051856 + (CA)n Simple_repeat Simple_repeat 2 25 0 284 293 0 0 chr5 63579107 63579182 -136050968 - MER117 DNA MER1_type -72 125 51 1663 157 4 8 chr5 63580803 63581058 -136049092 - AluSx SINE Alu -12 300 47 557 255 87 0 chr5 63581062 63581211 -136048939 + MLT1D LTR MaLR 341 502 -3 2045 120 20 0 chr5 63581707 63581999 -136048151 - AluSx SINE Alu -14 298 1 2558 74 0 3 chr5 63582961 63583272 -136046878 - AluY SINE Alu -1 310 1 334 102 61 0 chr5 63584124 63584173 -136045977 - MLT1C LTR MaLR -413 54 3 375 209 26 111 chr5 63584226 63584379 -136045771 - L1M4 LINE L1 -1276 4870 4731 2219 122 0 3 chr5 63584470 63584765 -136045385 + AluSq SINE Alu 1 294 -19 1094 278 123 23 chr5 63584835 63585234 -136044916 - MLT1H LTR MaLR -110 439 1 217 283 0 0 chr5 63585615 63585668 -136044482 - L2 LINE L2 0 3313 3261 358 268 10 0 chr5 63585704 63585801 -136044349 - MER5B DNA MER1_type -80 98 1 400 229 229 0 chr5 63586081 63586221 -136043929 - MER5A DNA MER1_type 0 189 18 269 316 104 21 chr5 63586475 63586694 -136043456 + MIR3 SINE MIR 5 253 -9 2187 115 3 3 chr5 63587543 63587847 -136042303 + AluSc SINE Alu 1 304 -5 747 276 72 43 chr5 63588987 63589473 -136040677 + MER39 LTR ERV1 1 707 0 230 0 33 0 chr5 63589824 63589854 -136040296 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 677 140 10 0 chr5 63589856 63589956 -136040194 - AluSg/x SINE Alu -30 279 179 181 292 0 0 chr5 63590127 63590192 -136039958 + L3b LINE CR1 1155 1219 -364 201 358 75 30 chr5 63590298 63590432 -136039718 - L2 LINE L2 -8 3264 3125 1939 136 7 17 chr5 63590795 63591089 -136039061 - AluSx SINE Alu -9 303 13 191 36 36 0 chr5 63591301 63591329 -136038821 + (TTCTC)n Simple_repeat Simple_repeat 4 32 0 267 279 12 12 chr5 63592101 63592187 -136037963 + MER5B DNA MER1_type 23 108 -70 574 180 27 87 chr5 63593829 63594012 -136036138 + MER5B DNA MER1_type 1 172 -6 3291 156 64 0 chr5 63594296 63594842 -136035308 - LTR26 LTR ERV1 -22 581 1 327 273 148 3 chr5 63594852 63595024 -136035126 - MIR SINE MIR -30 232 34 1583 227 60 38 chr5 63595507 63595987 -136034163 - MER34B LTR ERV1 0 585 80 611 160 5 43 chr5 63595997 63596184 -136033966 + CT-rich Low_complexity Low_complexity 1 180 0 1604 159 8 4 chr5 63596225 63596470 -136033680 - AluJb SINE Alu -51 261 16 242 207 69 0 chr5 63596505 63596563 -136033587 - MER34C LTR ERV1 -484 101 40 2356 83 3 29 chr5 63596832 63597145 -136033005 - AluSq SINE Alu -8 305 1 241 217 33 75 chr5 63597873 63597993 -136032157 + MIR SINE MIR 78 192 -70 1881 161 10 0 chr5 63598428 63598726 -136031424 - AluJb SINE Alu -11 301 1 2214 89 3 3 chr5 63598808 63599115 -136031035 + AluSp SINE Alu 1 307 0 6192 180 80 19 chr5 63599293 63599531 -136030619 - Charlie1a DNA MER1_type -1307 1454 1232 2251 52 52 58 chr5 63599531 63599840 -136030310 - AluY SINE Alu -4 307 1 6192 180 80 19 chr5 63599840 63600972 -136029178 - Charlie1a DNA MER1_type -1529 1232 1 570 247 74 26 chr5 63601743 63601933 -136028217 + MIR SINE MIR 50 248 -14 186 103 0 0 chr5 63601941 63601970 -136028180 + (TTA)n Simple_repeat Simple_repeat 3 31 0 851 238 102 66 chr5 63602021 63602353 -136027797 - LTR37B LTR ERV1 0 468 83 343 238 12 0 chr5 63602451 63602531 -136027619 - MIR SINE MIR -130 132 52 3052 152 34 27 chr5 63603465 63604026 -136026124 - MER34B LTR ERV1 0 565 1 1023 119 6 6 chr5 63604157 63604316 -136025834 - L1PB3 LINE L1 0 6154 5996 695 218 95 27 chr5 63606296 63606694 -136023456 - MLT1D LTR MaLR 0 505 6 271 390 39 0 chr5 63607161 63607315 -136022835 - L2 LINE L2 -2106 1208 1049 24 0 0 0 chr5 63607345 63607369 -136022781 + AT_rich Low_complexity Low_complexity 1 24 0 622 227 43 43 chr5 63607394 63607579 -136022571 - MIR SINE MIR -73 189 5 34 0 0 0 chr5 63608114 63608148 -136022002 + AT_rich Low_complexity Low_complexity 1 34 0 1818 178 40 8 chr5 63608149 63608526 -136021624 + Charlie5 DNA MER1_type 2235 2623 0 196 247 86 43 chr5 63612377 63612470 -136017680 - MIR SINE MIR -47 215 119 582 245 25 6 chr5 63612696 63612855 -136017295 + MER103 DNA DNA 3 164 -2 417 167 0 0 chr5 63613153 63613231 -136016919 + (TG)n Simple_repeat Simple_repeat 1 78 0 1486 192 11 4 chr5 63613747 63614013 -136016137 + AluJb SINE Alu 15 282 -30 186 264 0 38 chr5 63614504 63614557 -136015593 + L2 LINE L2 3242 3292 -21 1706 171 4 0 chr5 63614618 63614881 -136015269 + AluJo SINE Alu 1 264 -48 289 0 0 47 chr5 63614881 63614924 -136015226 + (GA)n Simple_repeat Simple_repeat 2 42 0 1004 178 39 43 chr5 63615059 63615217 -136014933 - AluJo SINE Alu -22 290 132 2143 114 0 23 chr5 63615217 63615516 -136014634 - AluSg SINE Alu -17 293 2 1004 178 39 43 chr5 63615516 63615587 -136014563 - AluJo SINE Alu -180 132 62 1544 219 70 72 chr5 63616018 63616460 -136013690 + L1ME3A LINE L1 5640 6082 -88 1459 191 3 57 chr5 63616460 63616758 -136013392 + AluJb SINE Alu 1 282 -30 1544 219 70 72 chr5 63616758 63616845 -136013305 + L1ME3A LINE L1 6082 6168 -2 2078 143 36 12 chr5 63618729 63619058 -136011092 - MER1B DNA MER1_type 0 337 1 422 243 39 0 chr5 63619372 63619475 -136010675 - L1MA9 LINE L1 -32 6280 6174 2132 130 0 25 chr5 63619675 63619991 -136010159 - AluSx SINE Alu -4 308 1 1874 132 15 0 chr5 63620090 63620363 -136009787 - AluSx SINE Alu -8 304 28 500 222 62 51 chr5 63620902 63621078 -136009072 - MER5B DNA MER1_type 0 178 1 1342 250 41 72 chr5 63622164 63622723 -136007427 + MER34 LTR ERV1 1 542 0 438 327 19 19 chr5 63622843 63623005 -136007145 + MIR3 SINE MIR 40 201 -7 508 303 76 10 chr5 63623214 63623412 -136006738 + MLT1J1 LTR MaLR 84 294 -152 2198 128 0 3 chr5 63623628 63623940 -136006210 - AluSx SINE Alu -1 311 1 1541 196 11 4 chr5 63625203 63625483 -136004667 + AluJb SINE Alu 1 282 -30 197 261 72 29 chr5 63625974 63626043 -136004107 + L2 LINE L2 3242 3313 0 1577 173 15 0 chr5 63626090 63626350 -136003800 + AluJo SINE Alu 1 264 -48 279 0 0 0 chr5 63626350 63626381 -136003769 + (GA)n Simple_repeat Simple_repeat 2 32 0 909 179 6 6 chr5 63626509 63626665 -136003485 - AluJo/FRAM SINE Alu -23 289 134 2177 100 0 20 chr5 63626666 63626965 -136003185 - AluY SINE Alu -18 293 1 1410 107 0 0 chr5 63627078 63627255 -136002895 - AluSg SINE Alu -132 178 2 672 165 33 25 chr5 63627273 63627394 -136002756 - FLAM_C SINE Alu -11 122 1 2332 42 0 0 chr5 63628967 63629232 -136000918 - AluY SINE Alu -46 265 1 24 32 0 0 chr5 63629298 63629329 -136000821 + AT_rich Low_complexity Low_complexity 1 31 0 284 276 149 0 chr5 63629706 63629793 -136000357 - L2 LINE L2 -4 3268 3169 245 372 32 0 chr5 63630639 63630733 -135999417 - L3 LINE CR1 -1192 385 289 809 301 57 69 chr5 63632287 63632781 -135997369 + L2 LINE L2 2220 2708 -606 2359 106 0 0 chr5 63632781 63633082 -135997068 + AluSx SINE Alu 1 301 -11 809 301 57 69 chr5 63633082 63633136 -135997014 + L2 LINE L2 2708 2761 -553 372 286 0 54 chr5 63633527 63633639 -135996511 + L2 LINE L2 3199 3304 -9 482 120 100 40 chr5 63634228 63634328 -135995822 - PABL_A-int LTR ERV1 -258 4757 4652 21 0 0 0 chr5 63634547 63634568 -135995582 + AT_rich Low_complexity Low_complexity 1 21 0 180 220 11 121 chr5 63635592 63635683 -135994467 + MIR SINE MIR 182 262 0 1073 216 19 0 chr5 63636733 63636941 -135993209 - AluJo SINE Alu -100 212 1 239 262 111 48 chr5 63636942 63637068 -135993082 + MIR SINE MIR 49 182 -80 526 261 67 17 chr5 63637185 63637365 -135992785 + MIR3 SINE MIR 16 204 -4 247 267 229 0 chr5 63637436 63637541 -135992609 + L2 LINE L2 2573 2701 -613 371 272 100 132 chr5 63637594 63637898 -135992252 + L2 LINE L2 2848 3160 -112 1821 201 11 11 chr5 63637898 63638261 -135991889 + MLT1A1 LTR MaLR 1 363 -2 1345 226 111 17 chr5 63638265 63638419 -135991731 + MSTD LTR MaLR 1 139 -257 2297 110 0 0 chr5 63638419 63638719 -135991431 + AluSx SINE Alu 6 305 -7 1345 226 111 17 chr5 63638719 63638926 -135991224 + MSTD LTR MaLR 139 396 0 371 272 100 132 chr5 63638926 63639017 -135991133 + L2 LINE L2 3163 3235 -37 936 255 43 79 chr5 63639271 63639741 -135990409 - MLT1H LTR MaLR 0 549 97 37874 79 15 3 chr5 63640513 63646588 -135983562 + L1PA5 LINE L1 1 6150 -4 419 182 82 107 chr5 63646737 63646803 -135983347 - MIR SINE MIR -33 229 163 1429 106 60 0 chr5 63646803 63647020 -135983130 - MER30 DNA MER1_type 0 230 1 419 182 82 107 chr5 63647020 63647112 -135983038 - MIR SINE MIR -99 163 75 822 174 33 148 chr5 63647291 63647561 -135982589 - MER8 DNA MER2_type 0 239 1 2052 133 11 43 chr5 63647569 63647916 -135982234 + MER1B DNA MER1_type 2 337 0 782 275 18 27 chr5 63647968 63648190 -135981960 - MER58A DNA MER1_type 0 224 5 246 315 54 47 chr5 63649564 63649713 -135980437 + HAL1 LINE L1 8 157 -2350 1152 166 19 0 chr5 63649713 63649918 -135980232 - MER3 DNA MER1_type 0 209 1 837 222 171 19 chr5 63649999 63650410 -135979740 + MLT1C LTR MaLR 1 503 -2 719 214 32 9 chr5 63651083 63651303 -135978847 - MER69 DNA AcHobo -3 2523 2299 2214 220 36 80 chr5 63651352 63651456 -135978694 - MER69 DNA AcHobo -1844 682 575 2446 132 45 26 chr5 63651456 63651882 -135978268 - Tigger2a DNA MER2_type 0 434 1 2214 220 36 80 chr5 63651882 63652490 -135977660 - MER69 DNA AcHobo -1951 575 1 251 241 228 48 chr5 63653358 63653503 -135976647 + MIR SINE MIR 37 207 -55 218 140 0 40 chr5 63653655 63653705 -135976445 + (TATATG)n Simple_repeat Simple_repeat 5 52 0 23 33 0 0 chr5 63654069 63654099 -135976051 + AT_rich Low_complexity Low_complexity 1 30 0 396 295 76 34 chr5 63655042 63655425 -135974725 + L1ME4a LINE L1 5265 5663 -458 1080 261 68 25 chr5 63655569 63655937 -135974213 + LTR40b LTR ERVL 4 387 -75 490 200 0 0 chr5 63655939 63656029 -135974121 + MLT1A2 LTR MaLR 5 94 -280 2321 187 103 8 chr5 63656029 63656504 -135973646 + MLT2B1 LTR ERVL 1 520 0 353 237 136 0 chr5 63656504 63656621 -135973529 - L1ME LINE L1 -365 5797 5667 276 240 147 16 chr5 63656795 63656924 -135973226 + L1ME4a LINE L1 5970 6115 -6 1189 258 30 79 chr5 63657703 63657834 -135972316 + MSTB1 LTR MaLR 1 137 -295 6398 76 8 13 chr5 63657834 63658824 -135971326 + L1PA7 LINE L1 5169 6153 -1 1189 258 30 79 chr5 63658824 63659189 -135970961 + MSTB1 LTR MaLR 137 432 0 1997 160 144 44 chr5 63659860 63660360 -135969790 - MER44D DNA MER2_type 0 605 1 25 31 0 0 chr5 63660489 63660521 -135969629 + AT_rich Low_complexity Low_complexity 1 32 0 654 142 7 121 chr5 63660522 63660663 -135969487 - FLAM_A SINE Alu -5 128 4 23 0 0 0 chr5 63664053 63664076 -135966074 + AT_rich Low_complexity Low_complexity 1 23 0 251 360 34 20 chr5 63664184 63664331 -135965819 + MIR3 SINE MIR 35 183 -25 237 198 86 0 chr5 63665568 63665649 -135964501 - Charlie7 DNA MER1_type -2455 157 70 490 230 79 0 chr5 63666621 63666760 -135963390 - MER103 DNA DNA -7 159 10 206 31 0 31 chr5 63667798 63667830 -135962320 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2242 120 10 0 chr5 63668146 63668455 -135961695 + AluSq SINE Alu 1 312 -1 417 339 75 29 chr5 63668951 63669186 -135960964 - MIR SINE MIR -12 250 5 2559 33 3 0 chr5 63669389 63669690 -135960460 - AluY SINE Alu -9 302 1 350 246 45 27 chr5 63670963 63671073 -135959077 - MIR SINE MIR -72 190 79 702 248 84 81 chr5 63671247 63671570 -135958580 - MER102b DNA MER1_type -12 329 6 5159 73 0 0 chr5 63672054 63672713 -135957437 - L1PA7 LINE L1 -8 6146 5488 541 240 43 125 chr5 63673161 63673299 -135956851 - MIR SINE MIR -2 260 155 2483 74 0 0 chr5 63673299 63673608 -135956542 + AluY SINE Alu 1 309 -2 541 240 43 125 chr5 63673608 63673748 -135956402 - MIR SINE MIR -107 155 5 231 222 32 0 chr5 63674134 63674197 -135955953 - L1ME LINE L1 -304 5817 5753 768 216 70 10 chr5 63675459 63675658 -135954492 + MIR SINE MIR 52 262 0 199 309 101 13 chr5 63675910 63676059 -135954091 + L3b LINE CR1 1104 1265 -318 349 243 101 7 chr5 63676281 63676429 -135953721 + LTR33 LTR ERVL 109 270 -251 602 294 13 0 chr5 63676462 63676615 -135953535 + L2 LINE L2 3159 3313 0 1129 256 119 40 chr5 63676862 63677610 -135952540 - L2 LINE L2 0 3313 2524 860 275 147 3 chr5 63678381 63678715 -135951435 - L2 LINE L2 -13 3300 2919 1265 184 86 4 chr5 63679116 63679372 -135950778 + MSTD LTR MaLR 118 394 -2 568 309 28 52 chr5 63679372 63679660 -135950490 - L3 LINE CR1 -304 1273 993 220 305 86 29 chr5 63679760 63679865 -135950285 + MIR SINE MIR 31 141 -121 253 118 0 145 chr5 63680062 63680138 -135950012 + L2 LINE L2 3242 3306 -7 2152 101 7 0 chr5 63681138 63681449 -135948701 - AluSg SINE Alu 0 315 3 221 318 12 59 chr5 63683151 63683236 -135946914 + L2 LINE L2 3183 3263 -9 198 239 155 14 chr5 63683334 63683405 -135946745 - L2 LINE L2 -12 3301 3221 1953 152 10 0 chr5 63683642 63683931 -135946219 - AluSx SINE Alu -20 292 1 683 154 34 35 chr5 63684231 63684375 -135945775 + Charlie5 DNA MER1_type 1 124 -2488 * 1727 138 69 24 chr5 63684367 63684743 -135945407 + Charlie5 DNA MER1_type 2232 2624 0 4172 69 31 6 chr5 63684761 63685763 -135944387 - MER11A LTR ERVK 0 1266 1 242 274 0 0 chr5 63685928 63685990 -135944160 + CT-rich Low_complexity Low_complexity 6 67 0 2100 132 0 0 chr5 63686224 63686519 -135943631 + AluSc SINE Alu 1 295 -14 320 183 61 13 chr5 63686852 63686968 -135943182 - MER3 DNA MER1_type -1 208 35 7857 18 2 0 chr5 63686968 63687858 -135942292 - L1PA2 LINE L1 -4 6151 5260 2461 220 37 80 chr5 63688344 63688952 -135941198 + MER69 DNA AcHobo 1 575 -1951 2662 134 45 26 chr5 63688952 63689378 -135940772 + Tigger2a DNA MER2_type 1 434 0 2461 220 37 80 chr5 63689378 63689478 -135940672 + MER69 DNA AcHobo 575 678 -1848 818 214 32 9 chr5 63689530 63689750 -135940400 + MER69 DNA AcHobo 2299 2523 -3 1144 238 163 32 chr5 63690423 63690834 -135939316 - MLT1C LTR MaLR -2 465 1 1258 166 19 0 chr5 63690915 63691120 -135939030 + MER3 DNA MER1_type 1 209 0 303 289 66 59 chr5 63691120 63691272 -135938878 - HAL1 LINE L1 -2350 157 5 890 270 18 27 chr5 63692643 63692865 -135937285 + MER58A DNA MER1_type 5 224 0 2195 133 11 43 chr5 63692917 63693264 -135936886 - MER1B DNA MER1_type 0 337 2 921 174 33 148 chr5 63693272 63693542 -135936608 + MER8 DNA MER2_type 1 239 0 414 182 82 107 chr5 63693722 63693814 -135936336 + MIR SINE MIR 75 163 -99 1539 106 60 0 chr5 63693814 63694031 -135936119 + MER30 DNA MER1_type 1 230 0 414 182 82 107 chr5 63694031 63694097 -135936053 + MIR SINE MIR 163 229 -33 42736 46 27 6 chr5 63694243 63700257 -135929893 - L1PA5 LINE L1 0 6154 1 2338 151 29 67 chr5 63700362 63700811 -135929339 + MSTB1 LTR MaLR 1 432 0 14019 73 7 1 chr5 63702066 63704604 -135925546 - L1PA7 LINE L1 -1 6153 3607 242 200 40 0 chr5 63704629 63704679 -135925471 - MER44D DNA MER2_type -653 52 1 1944 122 52 3 chr5 63705000 63705287 -135924863 + AluSx SINE Alu 1 301 -11 324 361 8 0 chr5 63706053 63706175 -135923975 - MIR SINE MIR -28 234 112 358 274 52 87 chr5 63706187 63706417 -135923733 + MLT1L LTR MaLR 307 528 -87 1527 192 17 3 chr5 63707062 63707354 -135922796 + AluJo SINE Alu 1 296 -16 2253 255 16 12 chr5 63707658 63708172 -135921978 + MLT1F LTR MaLR 27 542 0 301 271 197 62 chr5 63708746 63709071 -135921079 + L1M4 LINE L1 4943 5311 -835 2150 134 0 19 chr5 63709233 63709547 -135920603 - AluSx SINE Alu -4 308 1 31087 43 34 0 chr5 63712937 63716764 -135913386 + L1PA2 LINE L1 1 3956 -2190 13590 21 0 0 chr5 63716764 63719017 -135911133 + L1PA2 LINE L1 3899 6152 -3 305 85 0 51 chr5 63719020 63719079 -135911071 + (A)n Simple_repeat Simple_repeat 1 56 0 191 233 233 0 chr5 63719528 63719618 -135910532 - MIR SINE MIR -18 244 134 14518 125 36 31 chr5 63720750 63720943 -135909207 + Tigger1 DNA MER2_type 24 215 -2203 1805 183 3 0 chr5 63720943 63721243 -135908907 - AluJb SINE Alu -11 301 1 14518 125 36 31 chr5 63721243 63721896 -135908254 + Tigger1 DNA MER2_type 215 864 -1554 2111 117 17 0 chr5 63721896 63722196 -135907954 - AluSc SINE Alu -4 305 1 14518 125 36 31 chr5 63722196 63723732 -135906418 + Tigger1 DNA MER2_type 864 2417 -1 246 208 104 13 chr5 63723959 63724036 -135906114 + MIR SINE MIR 108 191 -71 737 272 66 12 chr5 63724702 63724959 -135905191 - L1ME2 LINE L1 -2 6162 5892 2109 161 107 80 chr5 63726853 63727310 -135902840 + MLT2B1 LTR ERVL 1 475 -45 240 86 0 0 chr5 63727310 63727345 -135902805 + (CTTAT)n Simple_repeat Simple_repeat 3 37 0 2109 161 107 80 chr5 63727345 63727390 -135902760 + MLT2B1 LTR ERVL 475 517 -3 2645 108 8 3 chr5 63727526 63727879 -135902271 - THE1A LTR MaLR 0 355 1 12770 85 8 1 chr5 63727879 63729448 -135900702 - THE1A-int LTR MaLR 0 1580 1 2483 130 8 3 chr5 63729448 63729801 -135900349 - THE1A LTR MaLR 0 355 1 871 210 91 5 chr5 63730466 63730652 -135899498 - MER3 DNA MER1_type -1 208 7 469 305 94 17 chr5 63730674 63730907 -135899243 - MIR SINE MIR 0 262 12 661 169 47 118 chr5 63731189 63731443 -135898707 + MLT1A1 LTR MaLR 1 236 -129 1931 175 5 21 chr5 63731506 63731884 -135898266 + L1MB5 LINE L1 5797 6168 -6 764 180 123 24 chr5 63731885 63732096 -135898054 + L1MD1 LINE L1 5591 5822 -420 378 292 8 15 chr5 63732096 63732359 -135897791 + GA-rich Low_complexity Low_complexity 1 261 0 1168 200 42 9 chr5 63732359 63732706 -135897444 + L1MD1 LINE L1 5815 6236 -6 38196 83 13 11 chr5 63732770 63738895 -135891255 + L1PA6 LINE L1 11 6143 -11 290 320 87 0 chr5 63739059 63739201 -135890949 - MIR SINE MIR -62 146 31 554 239 0 0 chr5 63739307 63739420 -135890730 - MLT1A1 LTR MaLR -1 364 252 3123 171 8 75 chr5 63739422 63740066 -135890084 + LTR9 LTR ERV1 1 601 -11 3376 198 48 20 chr5 63740069 63740962 -135889188 - L1MDa LINE L1 -4608 1932 1015 3552 149 23 2 chr5 63740981 63741600 -135888550 - L1MA4A LINE L1 -2 6301 5670 1138 173 5 0 chr5 63741610 63741812 -135888338 - L1MA4A LINE L1 -1281 4865 4663 * 13380 192 63 20 chr5 63741806 63747263 -135882887 - L1M1 LINE L1 -641 6364 652 3400 253 53 11 chr5 63747269 63748104 -135882046 - L1MDa LINE L1 -5654 886 17 2379 63 0 17 chr5 63748519 63748818 -135881332 + AluY SINE Alu 1 294 -17 15702 152 35 14 chr5 63750929 63755928 -135874222 - L1M1 LINE L1 -743 6822 1827 7343 61 4 21 chr5 63756032 63757088 -135873062 - L1P LINE L1 -3604 2542 1505 18480 85 5 5 chr5 63757192 63759833 -135870317 + L1P LINE L1 957 3597 -2549 361 263 53 64 chr5 63760657 63760685 -135869465 - MLT1K LTR MaLR -17 571 544 1804 118 4 0 chr5 63760685 63760931 -135869219 - AluSp SINE Alu -66 247 1 361 263 53 64 chr5 63760931 63761073 -135869077 - MLT1K LTR MaLR -44 544 403 535 248 84 44 chr5 63761436 63761686 -135868464 + L3 LINE CR1 1298 1557 -20 23 0 0 0 chr5 63761986 63762009 -135868141 + AT_rich Low_complexity Low_complexity 1 23 0 540 344 40 0 chr5 63762339 63762563 -135867587 + MIR SINE MIR 16 248 -14 21 57 0 0 chr5 63763248 63763283 -135866867 + AT_rich Low_complexity Low_complexity 1 35 0 912 97 0 8 chr5 63765029 63765153 -135864997 + FLAM_C SINE Alu 1 123 -20 828 256 53 16 chr5 63765293 63765539 -135864611 + MIR SINE MIR 8 262 0 578 224 39 62 chr5 63765629 63765808 -135864342 - MER5A DNA MER1_type -2 187 13 194 91 30 0 chr5 63767045 63767078 -135863072 + (TCTG)n Simple_repeat Simple_repeat 3 36 0 336 279 186 28 chr5 63767706 63767953 -135862197 - MLT1J LTR MaLR -2 509 224 1249 272 128 5 chr5 63768247 63768622 -135861528 - LTR16C LTR ERVL 0 491 71 2217 210 98 19 chr5 63768775 63769355 -135860795 - MLT1E2 LTR MaLR 0 626 1 648 187 32 16 chr5 63769733 63769856 -135860294 + FRAM SINE Alu 36 160 -16 800 182 0 21 chr5 63770942 63771085 -135859065 - FLAM_C SINE Alu -1 142 3 266 275 140 17 chr5 63771274 63771475 -135858675 - L1ME LINE L1 -289 5881 5656 2392 288 19 18 chr5 63772913 63773750 -135856400 - L1MEc LINE L1 -5522 874 37 1999 130 3 3 chr5 63774948 63775233 -135854917 + AluSx SINE Alu 21 305 -7 620 334 146 37 chr5 63775317 63775880 -135854270 + L2 LINE L2 2354 2977 -337 1041 324 102 11 chr5 63775885 63776358 -135853792 + MLT1H1 LTR MaLR 3 518 -37 680 146 99 10 chr5 63776622 63776814 -135853336 + LTR1 LTR ERV1 1 209 -576 4153 123 30 42 chr5 63776923 63777645 -135852505 + LTR1 LTR ERV1 72 785 0 192 279 44 0 chr5 63777645 63777713 -135852437 + L2 LINE L2 3243 3313 0 817 57 9 0 chr5 63777983 63778089 -135852061 + L1PA8 LINE L1 6058 6164 -8 786 211 28 0 chr5 63779676 63779856 -135850294 + MER5A DNA MER1_type 5 189 0 26973 48 1 0 chr5 63780515 63784850 -135845300 - L1PA5 LINE L1 -1 6153 1816 2101 119 0 0 chr5 63785124 63785437 -135844713 + AluSq SINE Alu 1 313 0 3510 189 60 18 chr5 63785440 63786520 -135843630 - L1MB2 LINE L1 -12 6159 5038 29 60 0 0 chr5 63786761 63786811 -135843339 + AT_rich Low_complexity Low_complexity 1 50 0 848 273 79 73 chr5 63787754 63788408 -135841742 - L2 LINE L2 -9 3304 2646 21 95 0 0 chr5 63788431 63788494 -135841656 + AT_rich Low_complexity Low_complexity 1 63 0 1559 213 81 19 chr5 63788529 63789050 -135841100 - L1M4 LINE L1 -743 5403 4851 2093 118 69 20 chr5 63789413 63789760 -135840390 + THE1B LTR MaLR 1 364 0 417 296 15 0 chr5 63790355 63790487 -135839663 - MER5B DNA MER1_type -32 146 13 1127 206 24 40 chr5 63790864 63791222 -135838928 - MLT2B3 LTR ERVL 0 554 207 4129 106 0 7 chr5 63791222 63791834 -135838316 - HERVL LTR ERVL -5046 608 1 1599 161 109 29 chr5 63791834 63792004 -135838146 - THE1C LTR MaLR 0 375 220 279 0 0 0 chr5 63792004 63792035 -135838115 + (GA)n Simple_repeat Simple_repeat 1 31 0 1599 161 109 29 chr5 63792035 63792211 -135837939 - THE1C LTR MaLR -155 220 1 2256 106 50 31 chr5 63792530 63792887 -135837263 - THE1B LTR MaLR 0 364 1 1650 59 9 0 chr5 63792887 63793108 -135837042 - THE1B-int LTR MaLR 0 1580 1358 1174 232 24 50 chr5 63793108 63793405 -135836745 - MSTB1 LTR MaLR -95 337 49 2252 150 5 19 chr5 63793405 63793772 -135836378 - THE1B LTR MaLR 0 364 3 1814 103 4 4 chr5 63793774 63794045 -135836105 - THE1B-int LTR MaLR 0 1580 1310 4298 157 199 2 chr5 63794151 63795189 -135834961 + L1PB1 LINE L1 845 2087 -4776 * 5681 145 17 2 chr5 63795166 63796179 -135833971 + L1PB1 LINE L1 5474 6515 -352 378 0 0 0 chr5 63796179 63796221 -135833929 + (TA)n Simple_repeat Simple_repeat 2 43 0 5681 145 17 2 chr5 63796221 63796580 -135833570 + L1PB1 LINE L1 6515 6867 0 28 0 0 0 chr5 63796580 63796608 -135833542 + AT_rich Low_complexity Low_complexity 1 28 0 306 319 235 5 chr5 63796629 63796833 -135833317 - MIR SINE MIR -10 252 2 185 344 97 21 chr5 63797081 63797174 -135832976 + L2 LINE L2 3138 3237 -35 340 240 0 16 chr5 63797379 63797504 -135832646 - AluSg/x SINE Alu 0 302 201 201 219 0 0 chr5 63797508 63797581 -135832569 + C-rich Low_complexity Low_complexity 1 73 0 8283 118 7 4 chr5 63797684 63798952 -135831198 - THE1B-int LTR MaLR -308 1272 1 2146 120 50 31 chr5 63798952 63799309 -135830841 - THE1B LTR MaLR 0 364 1 1224 183 19 16 chr5 63799472 63799729 -135830421 + MER51C LTR ERV1 383 640 0 292 225 108 48 chr5 63799735 63799943 -135830207 - L1MC/D LINE L1 -835 5456 5259 317 289 96 12 chr5 63800204 63800370 -135829780 - L1MC/D LINE L1 -3719 2427 2248 1438 116 5 5 chr5 63800395 63800610 -135829540 - MER4B LTR ERV1 0 610 396 297 80 20 20 chr5 63800652 63800702 -135829448 - MER4A LTR ERV1 -354 310 261 307 69 375 14 chr5 63800702 63800774 -135829376 - MER4A LTR ERV1 -566 98 1 2426 143 10 2 chr5 63800845 63801245 -135828905 + MER57A LTR ERV1 1 403 0 673 193 7 7 chr5 63802887 63803027 -135827123 + MLT1A2 LTR MaLR 227 366 -8 1086 248 13 10 chr5 63803073 63803380 -135826770 + L1PBa LINE L1 6 313 -6550 8349 191 28 7 chr5 63803714 63805301 -135824849 - L1M1 LINE L1 -5631 1934 315 2940 191 120 51 chr5 63805305 63806375 -135823775 - MER52A LTR ERV1 -173 1105 169 864 260 31 0 chr5 63806394 63806682 -135823468 - L1M4 LINE L1 -743 5403 5107 41947 40 2 2 chr5 63806710 63812859 -135817291 + L1PA3 LINE L1 2 6152 -3 24 0 0 0 chr5 63813087 63813111 -135817039 + AT_rich Low_complexity Low_complexity 1 24 0 2287 102 17 0 chr5 63813972 63814267 -135815883 + AluSg SINE Alu 1 300 -10 967 190 60 53 chr5 63814568 63814852 -135815298 - MLT1A1 LTR MaLR 0 365 80 255 328 53 16 chr5 63816099 63816288 -135813862 + HAL1 LINE L1 1509 1704 -803 746 309 142 31 chr5 63816607 63817312 -135812838 + L1MEc LINE L1 2153 2899 -3316 4356 174 30 8 chr5 63817314 63818552 -135811598 + L1MC1 LINE L1 4787 6056 -277 1389 111 6 0 chr5 63818602 63818783 -135811367 - AluSc SINE Alu -127 182 1 21 0 0 0 chr5 63819160 63819181 -135810969 + AT_rich Low_complexity Low_complexity 1 21 0 364 229 84 38 chr5 63819401 63819532 -135810618 - MIR SINE MIR -122 140 4 1622 210 66 47 chr5 63819540 63819992 -135810158 + MLT2B1 LTR ERVL 1 461 -59 1778 108 42 4 chr5 63820053 63820313 -135809837 + AluSg SINE Alu 32 301 -9 516 283 91 33 chr5 63820454 63820850 -135809300 + L1ME4a LINE L1 5311 5729 -2079 24 0 0 0 chr5 63821347 63821371 -135808779 + AT_rich Low_complexity Low_complexity 1 24 0 302 217 7 130 chr5 63821842 63821980 -135808170 + L1ME4a LINE L1 5963 6083 -38 33 43 0 29 chr5 63821990 63822035 -135808115 + AT_rich Low_complexity Low_complexity 1 45 -22 423 103 15 0 chr5 63822035 63822103 -135808047 - L1PB4 LINE L1 -8 6148 6080 33 43 0 29 chr5 63822103 63822126 -135808024 + AT_rich Low_complexity Low_complexity 45 67 0 623 154 91 0 chr5 63823244 63823354 -135806796 - AluSq/x SINE Alu -188 124 5 369 322 13 20 chr5 63823433 63823585 -135806565 - MER5A DNA MER1_type -3 186 36 2231 101 0 7 chr5 63823588 63823884 -135806266 - AluSc SINE Alu -15 294 1 1813 176 0 3 chr5 63825447 63825737 -135804413 + AluJb SINE Alu 6 294 -18 1922 128 17 17 chr5 63826277 63826567 -135803583 + AluJo SINE Alu 1 290 -22 1998 149 43 0 chr5 63827191 63827519 -135802631 - MER2 DNA MER2_type 0 344 3 279 194 233 31 chr5 63827816 63827945 -135802205 + L1ME3A LINE L1 5979 6133 -37 751 202 50 13 chr5 63828542 63828780 -135801370 + L1MEc LINE L1 2008 2254 -4142 996 244 107 5 chr5 63828788 63829219 -135800931 + L1MEc LINE L1 2984 3458 -2757 863 278 102 19 chr5 63829271 63829642 -135800508 + L1MEc LINE L1 3752 4153 -2062 455 270 184 0 chr5 63829750 63829913 -135800237 - MIR SINE MIR 0 262 70 753 272 116 10 chr5 63830509 63830803 -135799347 + MLT1I LTR MaLR 27 351 -58 882 235 95 29 chr5 63831130 63831197 -135798953 - MIR SINE MIR 0 262 201 1588 180 38 46 chr5 63831197 63831570 -135798580 + MLT1A2 LTR MaLR 1 370 -4 882 235 95 29 chr5 63831570 63831745 -135798405 - MIR SINE MIR -61 201 4 1661 154 45 24 chr5 63831788 63832017 -135798133 - MER44D DNA MER2_type -1883 608 385 195 42 0 0 chr5 63832017 63832041 -135798109 + (TC)n Simple_repeat Simple_repeat 1 24 0 1661 154 45 24 chr5 63832041 63832142 -135798008 - MER44D DNA MER2_type -2106 385 1 643 289 44 48 chr5 63833313 63833562 -135796588 - MIR SINE MIR -12 250 3 249 275 0 100 chr5 63833666 63833746 -135796404 - L2 LINE L2 -3 3269 3198 180 0 0 0 chr5 63833949 63833969 -135796181 + (CAATT)n Simple_repeat Simple_repeat 2 21 0 372 252 68 10 chr5 63833980 63834083 -135796067 - L2 LINE L2 -19 3253 3145 28832 114 12 51 chr5 63834332 63840366 -135789784 - L1PA8 LINE L1 0 6172 401 216 0 0 0 chr5 63840366 63840390 -135789760 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 28832 114 12 51 chr5 63840390 63840777 -135789373 - L1PA8 LINE L1 -5771 401 1 213 39 0 0 chr5 63841316 63841342 -135788808 + (TC)n Simple_repeat Simple_repeat 2 27 0 * 381 22 0 0 chr5 63841341 63841387 -135788763 + (TG)n Simple_repeat Simple_repeat 1 46 0 515 327 71 5 chr5 63841414 63841625 -135788525 + MIR SINE MIR 36 260 -2 26 30 0 0 chr5 63841793 63841826 -135788324 + AT_rich Low_complexity Low_complexity 1 33 0 183 80 0 0 chr5 63841892 63841917 -135788233 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 228 130 0 0 chr5 63842788 63842834 -135787316 + (GA)n Simple_repeat Simple_repeat 2 47 0 342 329 36 15 chr5 63843842 63843979 -135786171 + MIR SINE MIR 123 262 0 318 328 225 15 chr5 63844398 63845098 -135785052 + L2 LINE L2 2433 3313 0 2120 84 0 81 chr5 63846457 63846778 -135783372 - AluSg SINE Alu -13 297 3 362 318 58 37 chr5 63847291 63847480 -135782670 + MIR SINE MIR 58 250 -12 346 235 59 12 chr5 63847533 63847618 -135782532 - L2 LINE L2 -17 3296 3208 287 303 46 0 chr5 63847825 63847934 -135782216 + MER103 DNA DNA 3 116 -50 199 114 0 29 chr5 63847950 63847985 -135782165 + L2 LINE L2 3268 3301 -12 24 0 0 0 chr5 63848482 63848506 -135781644 + AT_rich Low_complexity Low_complexity 1 24 0 1525 137 125 35 chr5 63848649 63848993 -135781157 - THE1C LTR MaLR 0 375 1 4192 129 107 100 chr5 63850626 63851221 -135778929 - L1MC3 LINE L1 -3 7782 7090 258 256 70 12 chr5 63851221 63851307 -135778843 - MLT1J LTR MaLR -442 125 35 4192 129 107 100 chr5 63851307 63851699 -135778451 - L1MC3 LINE L1 -695 7090 6702 874 209 87 15 chr5 63851869 63852075 -135778075 - MER58A DNA MER1_type -3 221 1 256 248 154 26 chr5 63852203 63852320 -135777830 + MIR3 SINE MIR 77 208 0 725 251 74 71 chr5 63852671 63852997 -135777153 - MLT1J LTR MaLR 0 511 185 1753 188 85 10 chr5 63853338 63853738 -135776412 - MLT1D LTR MaLR 0 505 76 258 156 0 109 chr5 63854007 63854071 -135776079 - L2 LINE L2 0 3313 3257 4766 202 23 47 chr5 63854129 63854996 -135775154 - L1PA16 LINE L1 -6 6160 5274 183 42 0 0 chr5 63854996 63855020 -135775130 + (TTA)n Simple_repeat Simple_repeat 2 25 0 4766 202 23 47 chr5 63855020 63856534 -135773616 - L1PA16 LINE L1 -892 5274 3859 681 318 145 47 chr5 63856575 63857063 -135773087 + L2 LINE L2 2476 3041 -231 2478 66 3 0 chr5 63857063 63857367 -135772783 - AluY SINE Alu -6 305 1 681 318 145 47 chr5 63857367 63857404 -135772746 + L2 LINE L2 3041 3073 -199 323 395 62 0 chr5 63857504 63857633 -135772517 + L2 LINE L2 3134 3270 -2 881 194 5 46 chr5 63857803 63857999 -135772151 - MER5A DNA MER1_type -1 188 1 426 290 99 14 chr5 63858821 63859010 -135771140 - MIR3 SINE MIR -5 203 3 1733 314 149 16 chr5 63859512 63860820 -135769330 - L2 LINE L2 -15 3298 1812 283 235 35 59 chr5 63860851 63860936 -135769214 - MLT1J LTR MaLR -420 85 3 200 389 78 17 chr5 63862436 63862616 -135767534 - L3 LINE CR1 -319 1258 1068 1365 208 63 6 chr5 63862723 63863040 -135767110 + MLT2B1 LTR ERVL 1 335 -185 2215 117 3 0 chr5 63863116 63863407 -135766743 + AluSx SINE Alu 7 298 -14 324 210 0 0 chr5 63863468 63863549 -135766601 + (TA)n Simple_repeat Simple_repeat 1 81 0 232 241 51 0 chr5 63863651 63863730 -135766420 - L1MC4 LINE L1 -1340 6702 6620 210 111 56 0 chr5 63863737 63863773 -135766377 + (TATG)n Simple_repeat Simple_repeat 3 40 0 359 242 0 0 chr5 63863777 63863872 -135766278 + L1MC4 LINE L1 6912 7006 -1036 395 265 8 8 chr5 63863999 63864116 -135766034 + L1MC5 LINE L1 6980 7096 -865 1872 218 32 77 chr5 63864151 63864738 -135765412 - MER90 LTR ERV1 -14 561 1 566 259 68 14 chr5 63864970 63865190 -135764960 + L1MC5 LINE L1 7674 7905 -56 267 31 0 0 chr5 63866828 63866860 -135763290 + (TG)n Simple_repeat Simple_repeat 1 32 0 1657 201 0 7 chr5 63867002 63867286 -135762864 + AluJb SINE Alu 1 282 -30 198 0 0 0 chr5 63867288 63867310 -135762840 + (TGAA)n Simple_repeat Simple_repeat 3 24 0 537 261 85 43 chr5 63868385 63868887 -135761263 - MLT1G LTR MaLR -3 587 10 1521 281 153 23 chr5 63869119 63869219 -135760931 - L2 LINE L2 -5 3308 3222 6828 68 8 0 chr5 63869219 63870305 -135759845 + L1PA8 LINE L1 5070 6162 -10 1521 281 153 23 chr5 63870305 63870365 -135759785 - L2 LINE L2 -91 3222 3171 309 109 0 0 chr5 63870365 63870411 -135759739 + (TG)n Simple_repeat Simple_repeat 2 47 0 1521 281 153 23 chr5 63870411 63871106 -135759044 - L2 LINE L2 -142 3171 2340 1811 136 37 49 chr5 63871107 63871241 -135758909 - LTR23 LTR ERV1 -2 465 331 2306 89 3 22 chr5 63871241 63871276 -135758874 - AluSp SINE Alu 0 313 279 198 0 0 0 chr5 63871276 63871298 -135758852 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2306 89 3 22 chr5 63871298 63871577 -135758573 - AluSp SINE Alu -34 279 5 1811 136 37 49 chr5 63871577 63871882 -135758268 - LTR23 LTR ERV1 -136 331 6 996 152 97 9 chr5 63871923 63872140 -135758010 + MLT2B3 LTR ERVL 1 236 -318 220 275 55 44 chr5 63872146 63872237 -135757913 + L2 LINE L2 2966 3057 -215 766 116 70 8 chr5 63872263 63872392 -135757758 + LTR7 LTR ERV1 1 137 -313 597 183 7 39 chr5 63872498 63872651 -135757499 + LTR7 LTR ERV1 303 450 0 195 348 15 59 chr5 63872672 63872807 -135757343 + L2 LINE L2 3170 3298 -15 255 320 26 0 chr5 63873431 63873509 -135756641 - AluJ/FLAM SINE Alu -222 80 1 24 77 0 0 chr5 63874116 63874168 -135755982 + AT_rich Low_complexity Low_complexity 1 52 0 352 311 163 0 chr5 63875682 63875817 -135754333 + MIR3 SINE MIR 31 187 -21 1876 144 173 14 chr5 63876314 63876683 -135753467 + MSTA LTR MaLR 1 428 0 583 324 23 0 chr5 63878915 63879088 -135751062 - MER5B DNA MER1_type 0 178 2 1957 138 3 3 chr5 63879696 63879979 -135750171 - AluSx SINE Alu -29 283 1 268 185 49 0 chr5 63880503 63880584 -135749566 + (TA)n Simple_repeat Simple_repeat 2 86 0 363 136 0 0 chr5 63880584 63880643 -135749507 + (TG)n Simple_repeat Simple_repeat 2 60 0 1435 196 21 24 chr5 63880655 63880946 -135749204 - AluJo SINE Alu -22 290 1 1925 140 15 3 chr5 63881753 63882095 -135748055 + L1MB3 LINE L1 5836 6181 -2 775 235 105 92 chr5 63882991 63883535 -135746615 - L1MC4a LINE L1 -1851 5957 5407 222 91 0 0 chr5 63883624 63883657 -135746493 + (TG)n Simple_repeat Simple_repeat 2 34 0 828 308 52 63 chr5 63883674 63884208 -135745942 - L1MC4a LINE L1 -913 5233 4708 2117 102 7 10 chr5 63884208 63884501 -135745649 - AluY SINE Alu -19 292 1 828 308 52 63 chr5 63884501 63884699 -135745451 - L1MC4a LINE L1 -1438 4708 4509 875 157 45 35 chr5 63884767 63884965 -135745185 - L1MC1 LINE L1 0 6333 6134 398 266 8 0 chr5 63884965 63885089 -135745061 - L1MCa LINE L1 -943 5483 5359 14546 226 21 12 chr5 63885092 63889644 -135740506 + L1PA16 LINE L1 1774 6354 -515 1599 165 202 14 chr5 63889677 63890028 -135740122 - MSTA LTR MaLR -11 417 1 2464 136 61 67 chr5 63890030 63890552 -135739598 + L1PA16 LINE L1 6351 6869 0 7694 230 25 15 chr5 63890555 63892737 -135737413 - L1MCa LINE L1 -1054 5372 3168 2328 157 35 37 chr5 63892738 63893114 -135737036 - MSTB1 LTR MaLR 0 432 57 2258 158 8 8 chr5 63893114 63893476 -135736674 - THE1B LTR MaLR -2 362 1 11178 111 11 1 chr5 63893476 63895040 -135735110 - THE1B-int LTR MaLR 0 1580 1 2500 118 8 8 chr5 63895040 63895404 -135734746 - THE1B LTR MaLR 0 364 1 2328 157 35 37 chr5 63895404 63895458 -135734692 - MSTB1 LTR MaLR -372 60 1 1424 265 79 10 chr5 63895463 63896157 -135733993 - L1M4 LINE L1 -3260 3122 2096 * 7710 187 49 14 chr5 63896155 63896935 -135733215 - L1MCa LINE L1 -3959 2648 1897 1520 227 42 8 chr5 63896935 63897142 -135733008 - MLT1A1 LTR MaLR 0 365 140 270 81 0 0 chr5 63897142 63897179 -135732971 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1520 227 42 8 chr5 63897179 63897324 -135732826 - MLT1A1 LTR MaLR -225 140 1 7710 187 49 14 chr5 63897324 63898806 -135731344 - L1MCa LINE L1 -4710 1897 19 415 297 66 9 chr5 63898810 63899022 -135731128 - L1 LINE L1 -1705 4441 4218 1659 166 53 12 chr5 63899110 63899447 -135730703 - MER46B DNA MER2_type -7 229 4 208 0 62 0 chr5 63899447 63899479 -135730671 + (TA)n Simple_repeat Simple_repeat 2 35 0 410 225 90 9 chr5 63900837 63900948 -135729202 + MIR SINE MIR 14 133 -129 1357 225 89 65 chr5 63900948 63901379 -135728771 - MLT1D LTR MaLR 0 505 59 2351 176 31 7 chr5 63901379 63901829 -135728321 + LOR1b LTR ERV1 1 461 0 1357 225 89 65 chr5 63901829 63901890 -135728260 - MLT1D LTR MaLR -446 59 1 354 306 41 8 chr5 63901891 63902012 -135728138 + MIR SINE MIR 130 254 -8 5237 170 12 28 chr5 63902600 63903822 -135726328 - L1MA8 LINE L1 -10 7700 6492 1375 211 57 27 chr5 63903824 63903879 -135726271 - MLT2A2 LTR ERVL -8 445 393 198 71 0 0 chr5 63903879 63903907 -135726243 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 3134 40 0 0 chr5 63903908 63904288 -135725862 - L1PA4 LINE L1 -3 6152 5773 1375 211 57 27 chr5 63904288 63904711 -135725439 - MLT2A2 LTR ERVL -59 394 1 13511 170 31 19 chr5 63904714 63907500 -135722650 - L1MA8 LINE L1 -1070 6495 3677 1292 115 47 82 chr5 63907501 63907546 -135722604 - THE1C LTR MaLR 0 375 330 1998 149 7 0 chr5 63907546 63907848 -135722302 + AluSx SINE Alu 1 304 -8 1292 115 47 82 chr5 63907848 63908081 -135722069 - THE1C LTR MaLR -45 330 107 201 132 0 0 chr5 63908120 63908158 -135721992 + (TTTC)n Simple_repeat Simple_repeat 2 39 0 601 235 38 48 chr5 63908173 63908462 -135721688 + pTR5 LTR ERV1 743 1028 -1410 4677 86 17 164 chr5 63908541 63909507 -135720643 + LTR12 LTR ERV1 1 824 -2 2662 263 59 48 chr5 63909513 63910343 -135719807 - L1MA8 LINE L1 -4119 3446 2896 1988 117 0 4 chr5 63910343 63910617 -135719533 - AluY SINE Alu -6 305 33 2662 263 59 48 chr5 63910617 63911429 -135718721 - L1MA8 LINE L1 -4669 2896 2094 1201 318 28 32 chr5 63911517 63912021 -135718129 - L1MA8 LINE L1 -5778 1718 1217 461 228 167 0 chr5 63912294 63912408 -135717742 + MER94 DNA DNA 2 134 0 345 277 10 10 chr5 63912416 63912517 -135717633 - L1M3b LINE L1 -5213 1068 968 24 0 0 0 chr5 63913490 63913514 -135716636 + AT_rich Low_complexity Low_complexity 1 24 0 329 309 39 55 chr5 63914222 63914403 -135715747 - L1ME3A LINE L1 -254 5916 5739 233 194 14 56 chr5 63914840 63914912 -135715238 + L1ME LINE L1 5759 5827 -294 292 323 93 43 chr5 63915060 63915221 -135714929 + MER5B DNA MER1_type 7 175 -3 2176 125 0 0 chr5 63915243 63915540 -135714610 + AluSq SINE Alu 1 297 -16 1965 180 186 18 chr5 63915612 63916284 -135713866 - LTR48 LTR ERV1 0 722 1 267 269 97 21 chr5 63916307 63916452 -135713698 + L1M4 LINE L1 4503 4658 -1488 192 297 76 92 chr5 63917162 63917308 -135712842 + L2 LINE L2 1242 1386 -1928 6324 203 9 3 chr5 63917308 63919426 -135710724 - L1PA15 LINE L1 -2 6163 4035 192 297 76 92 chr5 63919426 63919464 -135710686 + L2 LINE L2 1386 1423 -1891 2302 133 60 12 chr5 63919676 63920075 -135710075 - Tigger1 DNA MER2_type 0 2418 2001 279 108 0 0 chr5 63920073 63920110 -135710040 - Tigger1 DNA MER2_type -1339 1079 1043 * 225 229 229 0 chr5 63920210 63920293 -135709857 + L2 LINE L2 1967 2068 -1246 637 284 50 15 chr5 63920335 63920536 -135709614 + MER63A DNA MER1_type 1 208 -2 332 214 43 0 chr5 63920679 63920749 -135709401 + Tigger3(Golem) DNA MER2_type 70 142 -2887 * 455 62 31 0 chr5 63920746 63920811 -135709339 + Tigger3(Golem) DNA MER2_type 2771 2837 -192 251 224 81 31 chr5 63921313 63921474 -135708676 - L1ME LINE L1 -316 5805 5637 13622 88 7 5 chr5 63921742 63923684 -135706466 + L1P LINE L1 1582 3526 -2620 226 213 33 0 chr5 63924236 63924297 -135705853 - MER103 DNA DNA -59 107 45 191 271 153 51 chr5 63925285 63925403 -135704747 - MIR SINE MIR -63 145 16 854 68 17 0 chr5 63925784 63925901 -135704249 + L1PA7 LINE L1 6036 6154 0 190 311 0 0 chr5 63926574 63926648 -135703502 - MIR SINE MIR -44 218 145 23 33 0 0 chr5 63926691 63926721 -135703429 + AT_rich Low_complexity Low_complexity 1 30 0 225 290 71 27 chr5 63926965 63927148 -135703002 + LTR67 LTR ERVL 354 544 -13 483 276 23 63 chr5 63927479 63927653 -135702497 + MIR SINE MIR 22 188 -74 3188 151 20 60 chr5 63927803 63928616 -135701534 + L1P3 LINE L1 12 718 -5428 1425 101 0 86 chr5 63928716 63928831 -135701319 - Tigger1 DNA MER2_type -1407 1011 928 2321 100 6 0 chr5 63928831 63929142 -135701008 - AluSq SINE Alu 0 313 1 1425 101 0 86 chr5 63929142 63929283 -135700867 - Tigger1 DNA MER2_type -1490 928 777 * 2715 165 6 61 chr5 63929273 63929812 -135700338 - Tigger1 DNA MER2_type -1909 509 1 1078 243 61 67 chr5 63930163 63930608 -135699542 - L1ME3 LINE L1 -22 6140 5699 226 395 108 12 chr5 63930779 63931037 -135699113 - L2 LINE L2 -1961 1353 1071 1419 204 32 37 chr5 63931110 63931141 -135699009 + LTR37A LTR ERV1 19 49 -377 4922 156 37 5 chr5 63931141 63931979 -135698171 - MER6 DNA MER2_type 0 865 1 1419 204 32 37 chr5 63931979 63932353 -135697797 + LTR37A LTR ERV1 49 422 -4 1804 161 48 123 chr5 63932386 63932890 -135697260 + MER45B DNA AcHobo 567 1032 -8 431 130 0 11 chr5 63933000 63933092 -135697058 + (TCCC)n Simple_repeat Simple_repeat 4 94 0 805 74 0 0 chr5 63933093 63933201 -135696949 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2040 141 0 0 chr5 63933201 63933484 -135696666 - AluSq SINE Alu -30 283 1 1460 29 0 0 chr5 63934106 63934277 -135695873 - L1PA4 LINE L1 -8 6147 5977 449 316 107 5 chr5 63935771 63935967 -135694183 - MIR SINE MIR -33 229 14 286 215 15 0 chr5 63935976 63936041 -135694109 + MER116 DNA Mariner 15 80 0 381 290 21 0 chr5 63936100 63936245 -135693905 - LTR67 LTR ERVL -2 555 408 189 0 0 0 chr5 63936604 63936625 -135693525 + (T)n Simple_repeat Simple_repeat 1 21 0 572 226 176 39 chr5 63936786 63936990 -135693160 - L2 LINE L2 -253 3060 2829 952 211 38 9 chr5 63937532 63937745 -135692405 - MER20 DNA MER1_type 0 219 1 5874 67 10 1 chr5 63938255 63939062 -135691088 + L1P LINE L1 3632 4445 -1701 2323 102 0 30 chr5 63939065 63939426 -135690724 + L1PA6 LINE L1 5802 6151 -3 371 286 104 39 chr5 63940521 63940703 -135689447 - MIR SINE MIR -4 258 65 324 0 0 0 chr5 63940781 63940817 -135689333 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 33 25 0 0 chr5 63942295 63942335 -135687815 + AT_rich Low_complexity Low_complexity 1 40 0 449 317 30 35 chr5 63943712 63943831 -135686319 + MIR SINE MIR 62 181 -81 1177 242 134 48 chr5 63943831 63944310 -135685840 - MLT2B1 LTR ERVL 0 520 1 449 317 30 35 chr5 63944310 63944392 -135685758 + MIR SINE MIR 181 262 0 213 227 0 0 chr5 63944392 63944436 -135685714 + (CAT)n Simple_repeat Simple_repeat 2 45 0 363 333 23 35 chr5 63946341 63946515 -135683635 + MER5A DNA MER1_type 11 182 -7 1536 154 143 11 chr5 63946615 63946966 -135683184 + MLT2C2 LTR ERVL 28 424 -40 1762 137 26 121 chr5 63947015 63947396 -135682754 + MER7A DNA MER2_type 2 344 -2 555 81 0 0 chr5 63947400 63947486 -135682664 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 394 321 87 24 chr5 63947530 63947782 -135682368 - L3b LINE CR1 -214 1369 1102 191 68 0 85 chr5 63948418 63948477 -135681673 + (CAAAC)n Simple_repeat Simple_repeat 1 54 0 2053 106 0 79 chr5 63950228 63950558 -135679592 - AluY SINE Alu -7 304 1 208 299 37 84 chr5 63950729 63950836 -135679314 - MIR SINE MIR -56 206 105 181 324 15 15 chr5 63951411 63951479 -135678671 + MIR3 SINE MIR 122 189 -19 444 250 0 0 chr5 63951775 63951859 -135678291 + MIR SINE MIR 8 91 -171 255 226 48 36 chr5 63951911 63951995 -135678155 + MER5B DNA MER1_type 24 108 -70 346 211 40 0 chr5 63952041 63952117 -135678033 - MER5A DNA MER1_type 0 189 111 280 342 202 0 chr5 63952733 63952847 -135677303 + MER5A DNA MER1_type 47 183 -6 201 74 0 0 chr5 63953450 63953477 -135676673 + (T)n Simple_repeat Simple_repeat 1 27 0 1599 213 20 36 chr5 63953949 63954390 -135675760 + MER92B LTR ERV1 156 589 -47 3998 137 37 10 chr5 63954404 63955106 -135675044 - L1MB2 LINE L1 -2 6169 5449 322 280 0 28 chr5 63955288 63955395 -135674755 - L1ME4a LINE L1 -27 6094 5991 225 195 0 0 chr5 63956213 63956254 -135673896 - MLT2C2 LTR ERVL 0 464 424 362 206 53 6 chr5 63956270 63956440 -135673710 + (TA)n Simple_repeat Simple_repeat 2 179 0 252 196 13 44 chr5 63956498 63956656 -135673494 + (TATATG)n Simple_repeat Simple_repeat 2 154 0 259 167 0 0 chr5 63956663 63956705 -135673445 - MLT2B2 LTR ERVL -71 444 403 1028 182 17 151 chr5 63958680 63958806 -135671344 + MLT1A2 LTR MaLR 1 142 -232 1784 142 75 160 chr5 63958806 63959474 -135670676 + LTR36 LTR ERV1 1 611 0 1028 182 17 151 chr5 63959474 63959764 -135670386 + MLT1A2 LTR MaLR 142 361 -13 275 250 13 0 chr5 63960187 63960263 -135669887 - MER116 DNA Mariner 0 80 4 1259 289 44 35 chr5 63960288 63960741 -135669409 + L2 LINE L2 2857 3313 0 360 295 57 48 chr5 63961266 63961476 -135668674 - L1MC4a LINE L1 -1557 6251 6040 241 214 43 0 chr5 63961807 63961877 -135668273 + L1MC4a LINE L1 7736 7808 0 29 0 0 0 chr5 63962194 63962223 -135667927 + AT_rich Low_complexity Low_complexity 1 29 0 2396 73 0 0 chr5 63962223 63962523 -135667627 + AluY SINE Alu 1 300 -11 1147 46 66 0 chr5 63962560 63962756 -135667394 + L1PA4 LINE L1 5977 6182 0 373 236 106 8 chr5 63962856 63962979 -135667171 + L2 LINE L2 3179 3313 0 293 179 15 15 chr5 63964294 63964361 -135665789 + LTR67 LTR ERVL 485 551 -6 966 224 229 56 chr5 63964416 63964686 -135665464 - MLT1H LTR MaLR 0 549 327 2116 141 10 0 chr5 63964686 63964985 -135665165 + AluSx SINE Alu 1 302 -10 966 224 229 56 chr5 63964985 63965007 -135665143 - MLT1H LTR MaLR -222 327 310 1937 167 15 57 chr5 63965007 63965414 -135664736 + MLT1B LTR MaLR 1 390 0 966 224 229 56 chr5 63965414 63965588 -135664562 - MLT1H LTR MaLR -239 310 1 2029 139 7 0 chr5 63966844 63967138 -135663012 - AluSx SINE Alu -16 296 1 267 103 0 0 chr5 63967742 63967781 -135662369 + (CA)n Simple_repeat Simple_repeat 2 40 0 2026 98 39 72 chr5 63968570 63968958 -135661192 + THE1C LTR MaLR 1 375 0 1239 193 31 0 chr5 63969085 63969313 -135660837 + MER46A DNA MER2_type 1 235 -1 26 0 0 0 chr5 63969942 63969968 -135660182 + AT_rich Low_complexity Low_complexity 1 26 0 203 255 0 0 chr5 63971515 63971566 -135658584 + MIR SINE MIR 11 61 -201 180 320 115 0 chr5 63971970 63972048 -135658102 - L2 LINE L2 -50 3222 3136 745 233 57 16 chr5 63972428 63972621 -135657529 + MIR SINE MIR 59 259 -3 288 275 88 22 chr5 63973245 63973336 -135656814 + MIR SINE MIR 20 116 -92 2030 201 97 4 chr5 63973485 63973978 -135656172 - MER34 LTR ERV1 -3 539 1 641 130 9 5 chr5 63974170 63974281 -135655869 + MSTA LTR MaLR 2 100 -328 1216 103 22 0 chr5 63974388 63974573 -135655577 - THE1C LTR MaLR -186 189 1 203 246 18 35 chr5 63975095 63975152 -135654998 - L3 LINE CR1 -2 1575 1520 246 270 10 31 chr5 63975369 63975474 -135654676 + MIR SINE MIR 8 107 -102 390 324 18 40 chr5 63975497 63975722 -135654428 + LTR33 LTR ERVL 4 223 -298 262 278 0 22 chr5 63975835 63975925 -135654225 + LTR33 LTR ERVL 434 521 0 205 204 0 23 chr5 63976061 63976105 -135654045 + MIR3 SINE MIR 162 204 -4 22 56 0 0 chr5 63976806 63976842 -135653308 + AT_rich Low_complexity Low_complexity 1 36 0 7191 60 15 9 chr5 63977401 63978641 -135651509 - SVA Other Other -875 1381 214 282 130 0 0 chr5 63978925 63978971 -135651179 - MLT1I LTR MaLR -284 125 80 2274 58 6 42 chr5 63978976 63979288 -135650862 + AluY SINE Alu 1 301 -10 258 309 191 7 chr5 63979836 63979972 -135650178 + MIR SINE MIR 45 205 -57 378 286 11 0 chr5 63979980 63980071 -135650079 + MIR SINE MIR 1 92 -170 1915 209 30 13 chr5 63980084 63980543 -135649607 - MLT1C LTR MaLR 0 467 1 671 169 8 0 chr5 63980572 63980702 -135649448 - MLT1-int LTR MaLR -976 395 265 257 372 51 7 chr5 63980727 63980864 -135649286 + MIR SINE MIR 120 262 0 2416 170 37 0 chr5 63982337 63982767 -135647383 + MLT2B2 LTR ERVL 1 446 -69 207 0 0 0 chr5 63982774 63982797 -135647353 + (TA)n Simple_repeat Simple_repeat 1 23 0 489 115 0 0 chr5 63983436 63983514 -135646636 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 282 73 0 0 chr5 63983548 63983589 -135646561 + (TTCC)n Simple_repeat Simple_repeat 4 44 0 2329 79 0 10 chr5 63983653 63983957 -135646193 - AluY SINE Alu -10 301 1 21 36 0 0 chr5 63989430 63989458 -135640692 + AT_rich Low_complexity Low_complexity 1 28 0 426 373 71 31 chr5 63989923 63990274 -135639876 + L2 LINE L2 2949 3313 0 28 0 0 0 chr5 63990365 63990393 -135639757 + AT_rich Low_complexity Low_complexity 1 28 0 231 363 89 13 chr5 63992905 63993060 -135637090 + MER5A DNA MER1_type 1 177 -12 2171 108 7 3 chr5 63993115 63993411 -135636739 + AluSq SINE Alu 2 298 -15 22 0 0 0 chr5 63994261 63994283 -135635867 + AT_rich Low_complexity Low_complexity 1 22 0 2161 112 0 10 chr5 63994634 63994946 -135635204 + AluSg SINE Alu 1 309 -1 2464 180 56 12 chr5 63995379 63995863 -135634287 + MLT1D LTR MaLR 1 505 0 1671 144 88 28 chr5 63998425 63998779 -135631371 + THE1C LTR MaLR 1 375 0 1131 124 6 6 chr5 63998781 63998959 -135631191 + THE1C-int LTR MaLR 3 180 -1400 * 5692 142 19 38 chr5 63998957 63999949 -135630201 + THE1C-int LTR MaLR 608 1580 0 1929 124 54 43 chr5 63999949 64000320 -135629830 + THE1C LTR MaLR 1 375 0 1245 267 97 85 chr5 64001408 64002377 -135627773 + L1MEd LINE L1 408 1388 -5028 2311 78 0 3 chr5 64002424 64002717 -135627433 + AluY SINE Alu 1 292 -19 891 274 36 54 chr5 64002972 64003699 -135626451 + L1MEd LINE L1 2335 3045 -3381 373 290 100 24 chr5 64005842 64006015 -135624135 - MIR SINE MIR -43 219 36 22 35 0 0 chr5 64006273 64006302 -135623848 + AT_rich Low_complexity Low_complexity 1 29 0 382 309 64 0 chr5 64007009 64007119 -135623031 - L2 LINE L2 0 3272 3156 402 311 90 69 chr5 64007207 64007641 -135622509 - L2 LINE L2 -398 2916 2474 917 283 36 12 chr5 64007858 64008109 -135622041 + MIR SINE MIR 6 262 0 1289 195 34 73 chr5 64008508 64008569 -135621581 - MLT2C1 LTR ERVL -2 395 333 2033 130 7 3 chr5 64008569 64008861 -135621289 + AluSp SINE Alu 1 293 -20 1289 195 34 73 chr5 64008861 64009210 -135620940 - MLT2C1 LTR ERVL -64 333 1 35 33 0 17 chr5 64009334 64009370 -135620780 + AT_rich Low_complexity Low_complexity 1 37 -22 2042 57 4 4 chr5 64009370 64009618 -135620532 - AluY SINE Alu -29 282 35 35 33 0 17 chr5 64009618 64009641 -135620509 + AT_rich Low_complexity Low_complexity 37 59 0 352 278 72 56 chr5 64010647 64010827 -135619323 - MER5A DNA MER1_type 0 189 7 2183 105 3 0 chr5 64010838 64011124 -135619026 + AluSx SINE Alu 1 287 -25 24 41 0 20 chr5 64011124 64011136 -135619014 + AT_rich Low_complexity Low_complexity 1 12 -36 351 0 0 0 chr5 64011136 64011175 -135618975 + (TG)n Simple_repeat Simple_repeat 2 40 0 24 41 0 20 chr5 64011175 64011211 -135618939 + AT_rich Low_complexity Low_complexity 12 48 0 694 198 47 23 chr5 64012169 64012341 -135617809 + MLT1B LTR MaLR 72 247 -143 599 212 141 27 chr5 64012689 64012873 -135617277 - MER63A DNA MER1_type -1 209 5 240 222 16 32 chr5 64013495 64013558 -135616592 - MER5A DNA MER1_type 0 189 128 315 105 0 0 chr5 64013864 64013921 -135616229 + (TC)n Simple_repeat Simple_repeat 2 58 0 1306 402 5 16 chr5 64014251 64014634 -135615516 - MLT1B LTR MaLR 0 390 12 26 30 0 0 chr5 64015592 64015625 -135614525 + AT_rich Low_complexity Low_complexity 1 33 0 321 26 0 0 chr5 64017938 64017976 -135612174 + (T)n Simple_repeat Simple_repeat 1 38 0 1915 237 121 19 chr5 64019426 64019988 -135610162 - MLT1G LTR MaLR 0 590 5 964 158 16 0 chr5 64022218 64022402 -135607748 + L1MD3 LINE L1 7809 7995 0 289 281 11 0 chr5 64022399 64022488 -135607662 + HAL1 LINE L1 1553 1642 -865 * 938 287 156 28 chr5 64022495 64022996 -135607154 - L2 LINE L2 0 3313 2756 1600 209 39 25 chr5 64023047 64023738 -135606412 + L1ME2 LINE L1 5128 5892 -272 381 186 147 20 chr5 64023749 64023851 -135606299 + MLT1C LTR MaLR 1 115 -352 450 259 9 9 chr5 64023855 64023967 -135606183 + MLT1C-int LTR MaLR 776 887 -484 2175 188 35 80 chr5 64024046 64024561 -135605589 + MLT1C-int LTR MaLR 879 1370 -1 1487 217 71 38 chr5 64024562 64025014 -135605136 + MLT1C LTR MaLR 1 467 0 272 221 15 0 chr5 64025015 64025083 -135605067 + L1ME2 LINE L1 5908 5976 -188 593 211 14 7 chr5 64025164 64025311 -135604839 + L1MA10 LINE L1 6176 6323 -11 21 36 0 0 chr5 64026605 64026633 -135603517 + AT_rich Low_complexity Low_complexity 1 28 0 868 286 79 79 chr5 64026692 64027565 -135602585 - L1M4 LINE L1 -2188 3958 3086 253 331 0 0 chr5 64027639 64027763 -135602387 + T-rich Low_complexity Low_complexity 1 124 0 626 273 144 24 chr5 64028134 64028556 -135601594 + L1M4 LINE L1 3614 4086 -2060 395 296 90 58 chr5 64028653 64029218 -135600932 - HAL1b LINE L1 -717 631 49 1865 209 40 13 chr5 64029437 64029733 -135600417 - L1MC3 LINE L1 -15 7770 7456 1789 171 44 16 chr5 64029733 64030119 -135600031 + MLT2C1 LTR ERVL 1 397 0 1865 209 40 13 chr5 64030119 64030272 -135599878 - L1MC3 LINE L1 -329 7456 7309 675 133 0 44 chr5 64030273 64030386 -135599764 - Tigger7 DNA MER2_type 0 2491 2384 1849 202 27 3 chr5 64030388 64030725 -135599425 - Tigger7 DNA MER2_type -388 345 1 826 208 66 33 chr5 64030807 64031019 -135599131 - L1MC3 LINE L1 -488 7297 7079 * 3394 238 35 11 chr5 64031018 64031979 -135598171 - L1M4 LINE L1 -743 5403 4420 27 49 0 0 chr5 64032416 64032457 -135597693 + AT_rich Low_complexity Low_complexity 1 41 0 939 275 8 56 chr5 64032547 64032907 -135597243 - L1MCb LINE L1 -5702 343 1 2440 275 76 19 chr5 64033958 64036044 -135594106 + L1ME3A LINE L1 3953 6159 -11 249 238 0 32 chr5 64036208 64036271 -135593879 - MER5A DNA MER1_type -1 188 128 206 42 42 104 chr5 64036564 64036660 -135593490 + (TTAAA)n Simple_repeat Simple_repeat 3 92 0 369 293 71 21 chr5 64036669 64036809 -135593341 + MIR SINE MIR 106 252 -10 673 246 15 0 chr5 64038214 64038348 -135591802 + MER5A DNA MER1_type 53 188 -1 626 339 11 18 chr5 64038522 64038796 -135591354 - L1MDa LINE L1 -6250 290 19 1179 285 76 60 chr5 64038812 64039444 -135590706 + Charlie2b DNA MER1_type 345 986 -1796 2534 211 39 26 chr5 64039455 64039996 -135590154 - MER77 LTR ERV1 -9 596 49 871 210 363 12 chr5 64039997 64040658 -135589492 + Charlie2 DNA MER1_type 1839 2731 -131 548 222 95 48 chr5 64040662 64040851 -135589299 + LTR40a LTR ERVL 1 198 -321 294 296 116 49 chr5 64040880 64041164 -135588986 + LTR40a LTR ERVL 118 420 -42 308 243 43 0 chr5 64041286 64041356 -135588794 + L2 LINE L2 3241 3313 0 442 368 60 42 chr5 64041499 64041782 -135588368 - L2 LINE L2 0 3272 2985 2832 84 23 8 chr5 64042554 64042946 -135587204 + MLT2A1 LTR ERVL 3 400 -44 231 143 0 0 chr5 64043296 64043331 -135586819 - MLT2A1 LTR ERVL 0 444 410 * 305 89 22 0 chr5 64043330 64043375 -135586775 + MLT2A1 LTR ERVL 408 453 0 189 284 95 0 chr5 64043785 64043859 -135586291 + L2 LINE L2 3147 3227 -86 1776 110 19 87 chr5 64043875 64044213 -135585937 - AluSc SINE Alu 0 309 1 23 33 0 0 chr5 64045780 64045810 -135584340 + AT_rich Low_complexity Low_complexity 1 30 0 5828 181 40 17 chr5 64045980 64047942 -135582208 - L1MC2 LINE L1 -19 6325 4318 1756 194 19 19 chr5 64048509 64048874 -135581276 - MLT1A1 LTR MaLR 0 365 1 1206 171 0 0 chr5 64049047 64049269 -135580881 + L1PA14 LINE L1 5940 6161 0 3890 80 11 0 chr5 64050898 64051436 -135578714 - L1PA13 LINE L1 -2 6161 5618 21 71 0 0 chr5 64051983 64052025 -135578125 + AT_rich Low_complexity Low_complexity 1 42 0 546 269 65 5 chr5 64052293 64052479 -135577671 - MIR SINE MIR -1 261 65 209 266 147 46 chr5 64052500 64052609 -135577541 - MIR SINE MIR -123 139 20 632 348 60 23 chr5 64053396 64053827 -135576323 + L2 LINE L2 2293 2739 -575 346 276 68 61 chr5 64054320 64054483 -135575667 - MIR SINE MIR -63 199 36 201 265 82 0 chr5 64054975 64055024 -135575126 + L2 LINE L2 1849 1901 -1413 516 326 30 48 chr5 64055590 64055622 -135574528 - MIR SINE MIR -30 232 201 1404 263 100 40 chr5 64055622 64056140 -135574010 + MLT1H LTR MaLR 1 549 0 516 326 30 48 chr5 64056140 64056337 -135573813 - MIR SINE MIR -61 201 7 239 341 35 0 chr5 64056405 64056490 -135573660 - MIR3 SINE MIR -42 166 79 202 284 27 68 chr5 64056602 64056676 -135573474 + L2 LINE L2 3199 3269 -3 202 216 20 0 chr5 64058094 64058145 -135572005 + (TG)n Simple_repeat Simple_repeat 1 52 0 635 247 47 94 chr5 64058572 64058847 -135571303 - MLT1F1 LTR MaLR -235 332 71 308 345 166 11 chr5 64059196 64059643 -135570507 + L1MC/D LINE L1 3633 4148 -1998 713 330 123 32 chr5 64059912 64060886 -135569264 + L1MC/D LINE L1 4490 5547 -695 305 193 57 57 chr5 64060949 64061037 -135569113 - L1MC4 LINE L1 -1339 6703 6616 373 250 125 0 chr5 64061156 64061252 -135568898 + L2 LINE L2 3201 3308 -5 21 57 0 0 chr5 64061916 64061951 -135568199 + AT_rich Low_complexity Low_complexity 1 35 0 1968 113 56 0 chr5 64062011 64062295 -135567855 + AluSc SINE Alu 1 300 -9 2681 7 0 0 chr5 64062910 64063200 -135566950 + AluY SINE Alu 20 309 -2 267 106 106 0 chr5 64063288 64063335 -135566815 - MADE1 DNA Mariner 0 80 29 318 316 0 0 chr5 64063450 64063526 -135566624 + L3 LINE CR1 1393 1468 -109 275 81 0 0 chr5 64063594 64063631 -135566519 + MADE1 DNA Mariner 44 80 0 426 195 0 12 chr5 64063736 64063818 -135566332 - L1PA12 LINE L1 -5803 1778 1698 5602 210 60 11 chr5 64063861 64065054 -135565096 - L1PA12 LINE L1 -6327 1254 4 217 326 42 21 chr5 64065056 64065151 -135564999 + L3b LINE CR1 1162 1258 -325 803 265 92 34 chr5 64065151 64065445 -135564705 + MER46C DNA MER2_type 5 315 -23 392 299 129 34 chr5 64066926 64067220 -135562930 - L1MC4 LINE L1 -1905 5903 5582 252 267 37 22 chr5 64067450 64067585 -135562565 + (CATATA)n Simple_repeat Simple_repeat 2 138 0 1369 125 5 5 chr5 64067827 64068027 -135562123 + AluSx SINE Alu 1 200 -112 1935 148 0 0 chr5 64068029 64068369 -135561781 + AluSx SINE Alu 1 340 0 275 332 157 16 chr5 64068370 64068816 -135561334 - L2 LINE L2 -1667 1647 1139 452 305 51 39 chr5 64068870 64069126 -135561024 + MLT1G LTR MaLR 22 280 -310 227 195 0 0 chr5 64070466 64070507 -135559643 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 272 195 150 53 chr5 64070685 64070798 -135559352 + MIR SINE MIR 126 249 -13 29 47 0 0 chr5 64072126 64072169 -135557981 + AT_rich Low_complexity Low_complexity 1 43 0 1559 170 157 37 chr5 64072444 64072826 -135557324 + MSTA LTR MaLR 1 428 0 7581 138 33 55 chr5 64072828 64074203 -135555947 + MSTA-int LTR MaLR 3 1347 -233 1792 178 131 11 chr5 64074234 64074616 -135555534 + MSTA LTR MaLR 1 428 0 203 105 53 0 chr5 64075053 64075091 -135555059 + CT-rich Low_complexity Low_complexity 5 44 0 2634 149 22 0 chr5 64075123 64075540 -135554610 - MSTB LTR MaLR 0 426 1 432 0 0 0 chr5 64075713 64075761 -135554389 + (CA)n Simple_repeat Simple_repeat 2 49 0 463 339 60 28 chr5 64075828 64076076 -135554074 - L1MC4 LINE L1 -2279 5529 5274 2155 109 3 0 chr5 64077890 64078225 -135551925 - AluSq SINE Alu 0 337 2 358 342 22 33 chr5 64079517 64079701 -135550449 + MLT1J1 LTR MaLR 190 371 -75 376 304 177 50 chr5 64079736 64080098 -135550052 + MLT1J2 LTR MaLR 36 443 -7 220 219 0 0 chr5 64080215 64080256 -135549894 + (CATATA)n Simple_repeat Simple_repeat 4 44 0 2323 144 90 0 chr5 64080256 64080646 -135549504 - MSTB LTR MaLR -1 425 1 436 311 12 0 chr5 64080934 64081098 -135549052 + L1PB3 LINE L1 -658 4294966803 -6697 5727 195 38 19 chr5 64081117 64083260 -135546890 + L1PB3 LINE L1 1 1494 -4710 268 111 0 0 chr5 64083260 64083305 -135546845 + AluSc SINE Alu 254 298 -1 858 208 17 0 chr5 64083308 64083481 -135546669 + L1PB3 LINE L1 3575 3750 -2453 2960 52 1 23 chr5 64083482 64083885 -135546265 + MER11C LTR ERVK 1 457 -614 7813 175 39 15 chr5 64083885 64085473 -135544677 + L1PB3 LINE L1 3751 5299 -912 189 0 0 0 chr5 64085473 64085494 -135544656 + (CAA)n Simple_repeat Simple_repeat 2 22 0 7813 175 39 15 chr5 64085494 64085610 -135544540 + L1PB3 LINE L1 5299 5411 -800 2087 100 34 3 chr5 64085610 64085901 -135544249 - AluSx SINE Alu -11 301 2 7813 175 39 15 chr5 64085901 64086603 -135543547 + L1PB3 LINE L1 5411 6208 -3 1141 56 0 0 chr5 64087213 64087357 -135542793 - L1PA5 LINE L1 -8 6146 6003 875 210 36 184 chr5 64087668 64088191 -135541959 + L1M4 LINE L1 609 1054 -5488 * 1286 235 169 23 chr5 64088190 64088628 -135541522 + L1MD2 LINE L1 5856 6357 -2 316 276 23 70 chr5 64088784 64089041 -135541109 - L1MEc LINE L1 -1941 4274 4030 274 192 13 77 chr5 64091304 64091382 -135538768 - L1MC4a LINE L1 -325 7483 7411 2801 158 20 8 chr5 64091387 64091893 -135538257 - L1MA5 LINE L1 0 6300 5789 1632 195 54 22 chr5 64092481 64092851 -135537299 - MLT1B LTR MaLR 0 390 9 330 67 0 0 chr5 64093004 64093049 -135537101 + (TGG)n Simple_repeat Simple_repeat 1 45 0 202 211 0 0 chr5 64093972 64094010 -135536140 + (TG)n Simple_repeat Simple_repeat 2 39 0 266 319 0 0 chr5 64094012 64094081 -135536069 + MER5B DNA MER1_type 60 128 -50 940 198 16 5 chr5 64094366 64094553 -135535597 - MER5A DNA MER1_type 0 189 1 425 329 35 24 chr5 64095331 64095586 -135534564 - L1MEc LINE L1 -2659 3556 3299 286 337 16 4 chr5 64095589 64095838 -135534312 - L1MEc LINE L1 -3228 2987 2736 237 271 14 0 chr5 64095980 64096050 -135534100 - L1MEc LINE L1 -3610 2605 2535 202 330 139 24 chr5 64097001 64097054 -135533096 - MIR SINE MIR 0 262 216 3572 150 43 29 chr5 64097054 64097723 -135532427 + MER67C LTR ERV1 1 682 -28 2129 119 0 19 chr5 64097723 64098041 -135532109 - AluSx SINE Alu 0 312 1 3572 150 43 29 chr5 64098041 64098071 -135532079 + MER67C LTR ERV1 682 710 0 202 330 139 24 chr5 64098071 64098227 -135531923 - MIR SINE MIR -46 216 23 532 354 14 21 chr5 64099722 64100002 -135530148 - LTR16C LTR ERVL -1 490 213 958 172 45 7 chr5 64100002 64100213 -135529937 - MLT1D LTR MaLR 0 505 322 461 273 27 59 chr5 64100213 64100536 -135529614 - L1MEc LINE L1 -4532 1784 1226 2060 253 75 38 chr5 64100613 64101384 -135528766 - L1MEc LINE L1 -5235 970 171 365 348 38 95 chr5 64101680 64102154 -135527996 - L2 LINE L2 0 3272 2826 463 322 99 5 chr5 64102205 64102416 -135527734 + LTR33 LTR ERVL 54 284 -237 1054 264 25 28 chr5 64102486 64103042 -135527108 - MLT2E LTR ERVL -17 611 3 1786 157 45 12 chr5 64103432 64103769 -135526381 + MER7A DNA MER2_type 1 346 0 213 178 0 0 chr5 64103812 64103857 -135526293 + GA-rich Low_complexity Low_complexity 1 45 0 237 65 0 0 chr5 64107742 64107773 -135522377 + (T)n Simple_repeat Simple_repeat 1 31 0 255 272 37 37 chr5 64108359 64108440 -135521710 - MIR SINE MIR -122 140 60 184 250 0 54 chr5 64108684 64108740 -135521410 + L2 LINE L2 3251 3303 -10 23 0 0 0 chr5 64110021 64110044 -135520106 + AT_rich Low_complexity Low_complexity 1 23 0 193 195 0 49 chr5 64110432 64110473 -135519677 - L2 LINE L2 -95 3218 3180 195 100 0 0 chr5 64110580 64110610 -135519540 + (TCTG)n Simple_repeat Simple_repeat 2 31 0 282 288 0 0 chr5 64111337 64111410 -135518740 + L1ME LINE L1 5793 5865 -305 * 1491 283 111 51 chr5 64111401 64112626 -135517524 - HAL1 LINE L1 -1166 1341 43 187 358 158 0 chr5 64113703 64113798 -135516352 + L2 LINE L2 3162 3271 -1 2118 154 30 49 chr5 64114612 64115106 -135515044 - MER31A LTR ERV1 0 485 1 1314 227 33 10 chr5 64115130 64115430 -135514720 - MER31A-int LTR ERV1 -65 4871 4565 3326 166 88 123 chr5 64115462 64116507 -135513643 - MER31B-int LTR ERV1 -371 4565 3603 1538 229 55 15 chr5 64116516 64116991 -135513159 - MER31B-int LTR ERV1 -1694 3242 2749 1637 201 91 89 chr5 64117063 64117891 -135512259 - MER31B-int LTR ERV1 -2409 2527 1699 3708 42 15 0 chr5 64117907 64117925 -135512225 + L1P LINE L1 4843 4859 -1287 3564 41 2 5 chr5 64117925 64118367 -135511783 - L1PA5 LINE L1 0 6154 5714 3708 42 15 0 chr5 64118367 64118825 -135511325 + L1P LINE L1 4859 5326 -820 5095 184 75 81 chr5 64118884 64120327 -135509823 - MER31B-int LTR ERV1 -3487 1449 15 1975 202 2 63 chr5 64120376 64120871 -135509279 - MER31B LTR ERV1 -1 465 1 214 200 40 13 chr5 64120934 64121009 -135509141 + (TTA)n Simple_repeat Simple_repeat 2 78 0 2209 89 82 146 chr5 64123080 64123404 -135506746 - L1PB1 LINE L1 0 6151 5865 324 0 0 0 chr5 64123404 64123440 -135506710 + (TG)n Simple_repeat Simple_repeat 2 37 0 2209 89 82 146 chr5 64123440 64123588 -135506562 - L1PB1 LINE L1 -286 5865 5709 * 2258 215 46 8 chr5 64123585 64124468 -135505682 - L1MB7 LINE L1 -318 6677 5759 2346 267 37 3 chr5 64124581 64125469 -135504681 - L1MB7 LINE L1 -2967 3990 3073 * 5341 210 39 24 chr5 64125465 64127690 -135502460 + L1MB8 LINE L1 3921 6177 -1 809 262 75 92 chr5 64127689 64128417 -135501733 - L1MB7 LINE L1 -5309 1546 831 * 353 232 36 18 chr5 64128637 64128776 -135501374 - L1MB7 LINE L1 -6356 499 93 268 284 181 9 chr5 64129305 64129421 -135500729 + L2 LINE L2 3136 3271 -1 194 356 58 0 chr5 64130308 64130395 -135499755 + MIR SINE MIR 66 157 -105 218 154 13 90 chr5 64130970 64131048 -135499102 + (ATTAG)n Simple_repeat Simple_repeat 4 75 0 275 215 0 15 chr5 64131079 64131144 -135499006 - MLT1H LTR MaLR -6 543 480 5950 194 55 8 chr5 64131152 64131589 -135498561 + L1M3f LINE L1 10 425 -4903 2383 50 0 0 chr5 64131589 64131944 -135498206 - AluY SINE Alu 0 355 1 5950 194 55 8 chr5 64131944 64132641 -135497509 + L1M3f LINE L1 425 1200 -4128 2486 189 27 14 chr5 64132958 64133549 -135496601 + L1M3f LINE L1 3145 3743 -2585 688 210 151 73 chr5 64134999 64135107 -135495043 + MER58A DNA MER1_type 1 99 -2321 2796 183 119 20 chr5 64135107 64135818 -135494332 + LTR48 LTR ERV1 4 785 -2 688 210 151 73 chr5 64135818 64135914 -135494236 + MER58A DNA MER1_type 99 221 -3 1000 294 53 24 chr5 64136902 64137280 -135492870 + LTR16C LTR ERVL 98 486 -5 233 345 193 0 chr5 64137369 64137540 -135492610 - L2 LINE L2 -531 2783 2580 1776 143 0 0 chr5 64140177 64140442 -135489708 + AluSx SINE Alu 32 296 -16 23 54 0 0 chr5 64140769 64140806 -135489344 + AT_rich Low_complexity Low_complexity 1 37 0 388 252 35 28 chr5 64140897 64141040 -135489110 + MIR SINE MIR 118 261 -1 721 283 88 78 chr5 64142046 64142446 -135487704 + L2 LINE L2 2905 3308 -5 2768 200 112 13 chr5 64142498 64143214 -135486936 + LTR48 LTR ERV1 1 787 0 4104 108 77 9 chr5 64143306 64143953 -135486197 + LTR8 LTR ERV1 1 691 0 21 0 0 0 chr5 64144434 64144455 -135485695 + AT_rich Low_complexity Low_complexity 1 21 0 1878 203 9 26 chr5 64144890 64145313 -135484837 + L1MB7 LINE L1 5752 6167 -17 1621 149 83 31 chr5 64145396 64145685 -135484465 - AluSx SINE Alu -8 304 1 360 257 20 53 chr5 64145711 64145846 -135484304 - L1MEc LINE L1 -3619 3322 3191 2082 120 10 10 chr5 64145846 64146145 -135484005 - AluSx SINE Alu -13 299 1 360 257 20 53 chr5 64146145 64146161 -135483989 - L1MEc LINE L1 -3750 3191 3176 227 235 35 24 chr5 64146160 64146245 -135483905 + L1MDa LINE L1 1663 1748 -4792 * 479 224 128 36 chr5 64146267 64146486 -135483664 - L1MEc LINE L1 -3732 3209 2971 486 263 119 17 chr5 64146495 64146512 -135483638 - L1MEc LINE L1 -4080 3042 3028 1893 148 7 0 chr5 64146512 64146796 -135483354 - AluSx SINE Alu -25 287 2 486 263 119 17 chr5 64146796 64147014 -135483136 - L1MEc LINE L1 -4094 3028 2783 305 247 37 0 chr5 64147034 64147115 -135483035 - L1MEc LINE L1 -4552 2570 2487 657 232 32 68 chr5 64147137 64147201 -135482949 + MER58A DNA MER1_type 42 107 -2313 1616 199 42 20 chr5 64147201 64147557 -135482593 + MLT1A1 LTR MaLR 2 365 0 657 232 32 68 chr5 64147557 64147682 -135482468 + MER58A DNA MER1_type 107 224 0 654 299 46 28 chr5 64147996 64148320 -135481830 - L1MEc LINE L1 -5999 424 95 270 281 73 0 chr5 64148473 64148555 -135481595 + L1MCc LINE L1 337 424 -5999 271 247 174 21 chr5 64148757 64148947 -135481203 - L1MEc LINE L1 -5094 1302 1084 3444 147 8 39 chr5 64149038 64149395 -135480755 + MER7C DNA MER2_type 2 334 -2694 2246 110 0 16 chr5 64149395 64149705 -135480445 - AluSq SINE Alu -8 305 1 3444 147 8 39 chr5 64149705 64149967 -135480183 + MER7C DNA MER2_type 334 602 0 913 237 52 87 chr5 64149974 64150389 -135479761 - L1ME1 LINE L1 0 6334 5797 831 291 101 67 chr5 64150381 64151276 -135478874 - L1MEc LINE L1 -5450 946 22 * 709 304 140 25 chr5 64151262 64152319 -135477831 - L1ME1 LINE L1 -956 5190 4013 * 300 270 10 0 chr5 64152324 64152424 -135477726 - L1ME3A LINE L1 -8 6162 6062 820 290 91 17 chr5 64152477 64152949 -135477201 - L1M4 LINE L1 -1095 5287 4781 2853 163 28 15 chr5 64152951 64153859 -135476291 - L1P4 LINE L1 -441 5725 4812 308 219 9 88 chr5 64153863 64153977 -135476173 - L1M4 LINE L1 -1896 4486 4382 511 285 166 0 chr5 64153987 64154306 -135475844 - L1M4 LINE L1 -1959 4423 4052 231 289 110 29 chr5 64154369 64154615 -135475535 - L1MDb LINE L1 -4959 1449 1184 312 296 72 13 chr5 64154621 64154773 -135475377 - L1MDb LINE L1 -5124 1285 1125 264 91 0 0 chr5 64155489 64155533 -135474617 + (TC)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr5 64155533 64155564 -135474586 + (TG)n Simple_repeat Simple_repeat 2 32 0 13351 135 68 14 chr5 64155566 64157001 -135473149 - Tigger1 DNA MER2_type -1 2417 809 1955 122 11 0 chr5 64157001 64157271 -135472879 + AluSx SINE Alu 1 273 -39 13351 135 68 14 chr5 64157271 64158127 -135472023 - Tigger1 DNA MER2_type -1609 809 1 7192 228 21 24 chr5 64159456 64161052 -135469098 - L1PA12 LINE L1 -3702 3882 2283 2114 152 22 17 chr5 64161052 64161414 -135468736 - THE1B LTR MaLR 0 364 1 7192 228 21 24 chr5 64161414 64162611 -135467539 - L1PA12 LINE L1 -5301 2283 7 333 330 18 18 chr5 64162642 64162751 -135467399 - L1ME LINE L1 -523 5647 5539 979 107 0 0 chr5 64162847 64162978 -135467172 + AluSc SINE Alu 174 304 -5 291 283 49 28 chr5 64163303 64163627 -135466523 - L1ME LINE L1 -744 5402 5102 23 0 0 0 chr5 64163765 64163788 -135466362 + AT_rich Low_complexity Low_complexity 1 23 0 237 95 0 0 chr5 64163840 64163882 -135466268 + LTR66 LTR ERVL 398 439 -171 1723 119 0 16 chr5 64163885 64164129 -135466021 - AluSc SINE Alu -17 292 53 428 279 94 31 chr5 64164145 64164529 -135465621 - L1ME LINE L1 -2340 3806 3399 1150 167 55 172 chr5 64164897 64165129 -135465021 - MLT1A2 LTR MaLR 0 374 211 10165 39 4 4 chr5 64165129 64167142 -135463008 - L1PA4 LINE L1 0 6155 4132 1150 167 55 172 chr5 64167142 64167328 -135462822 - MLT1A2 LTR MaLR -163 211 5 3387 189 41 41 chr5 64167331 64167831 -135462319 - L1MB7 LINE L1 -7 6177 5675 1992 127 6 16 chr5 64167831 64168146 -135462004 - AluSx SINE Alu 0 312 1 3387 189 41 41 chr5 64168146 64168419 -135461731 - L1MB7 LINE L1 -508 5676 5404 26 50 0 0 chr5 64168420 64168460 -135461690 + AT_rich Low_complexity Low_complexity 1 40 0 542 145 0 0 chr5 64169812 64169895 -135460255 - MER72 LTR ERV1 -6 716 634 182 128 26 0 chr5 64169946 64169985 -135460165 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 4638 67 0 10 chr5 64169992 64170602 -135459548 - L1PA6 LINE L1 -6 6148 5545 4242 158 0 9 chr5 64170602 64171256 -135458894 - MER72 LTR ERV1 -74 648 1 857 309 98 14 chr5 64172920 64173337 -135456813 + LTR33 LTR ERVL 1 452 -69 2228 149 82 16 chr5 64173645 64174074 -135456076 + MSTB2 LTR MaLR 1 457 0 185 270 16 48 chr5 64174345 64174408 -135455742 - L3 LINE CR1 -98 1479 1419 317 122 0 0 chr5 64174737 64174786 -135455364 - MSTB2 LTR MaLR -1 456 408 385 181 0 12 chr5 64176073 64176156 -135453994 - L1MEd LINE L1 -5946 173 92 503 307 33 14 chr5 64176162 64176377 -135453773 + L1MCc LINE L1 11 229 -6194 1685 241 204 48 chr5 64176429 64177856 -135452294 - L1MD3 LINE L1 -10 7985 6267 2683 226 40 59 chr5 64178026 64179012 -135451138 - L1MC4a LINE L1 -1588 6220 5254 497 225 35 18 chr5 64179122 64179291 -135450859 - L1MC4a LINE L1 -1671 6137 5966 740 306 65 41 chr5 64179377 64180275 -135449875 - L1MC4a LINE L1 -1039 5107 4189 305 245 53 0 chr5 64180465 64180559 -135449591 + L1ME4a LINE L1 5716 5814 -307 2452 189 2 51 chr5 64180660 64181148 -135449002 + MLT2B2 LTR ERVL 6 469 -46 228 67 0 0 chr5 64181167 64181197 -135448953 + (TG)n Simple_repeat Simple_repeat 1 30 0 372 65 0 0 chr5 64181233 64181279 -135448871 + Ricksha DNA DNA 861 906 -2340 295 287 46 0 chr5 64181318 64181426 -135448724 - MER103 DNA DNA -51 115 3 323 319 95 15 chr5 64181510 64181773 -135448377 + L1ME4a LINE L1 5834 6117 -4 709 304 16 5 chr5 64182649 64182843 -135447307 - MIR SINE MIR -17 245 50 312 330 85 67 chr5 64183878 64184160 -135445990 - MLT1K LTR MaLR -125 463 177 491 282 43 31 chr5 64184423 64184586 -135445564 + MIR SINE MIR 49 213 -49 1537 273 63 16 chr5 64185534 64186092 -135444058 + MLT1E LTR MaLR 2 587 -6 527 276 55 11 chr5 64186614 64186795 -135443355 - MIR SINE MIR 0 262 74 369 98 0 0 chr5 64186844 64186895 -135443255 + MADE1 DNA Mariner 1 51 -29 361 265 12 0 chr5 64186895 64186978 -135443172 - MIR SINE MIR -62 200 117 194 333 102 11 chr5 64187241 64187427 -135442723 + L2 LINE L2 2840 3042 -230 473 229 134 45 chr5 64187879 64188080 -135442070 - L2 LINE L2 -85 3228 3010 234 179 0 0 chr5 64188297 64188336 -135441814 + MLT1B LTR MaLR 1 39 -351 183 156 0 0 chr5 64188336 64188368 -135441782 + (TATATG)n Simple_repeat Simple_repeat 2 33 0 326 371 117 10 chr5 64188678 64189071 -135441079 + L2 LINE L2 1666 2100 -1214 21 0 0 0 chr5 64189449 64189470 -135440680 + AT_rich Low_complexity Low_complexity 1 21 0 440 157 12 12 chr5 64190099 64190182 -135439968 - MLT1C LTR MaLR -28 439 357 770 342 79 42 chr5 64190472 64191309 -135438841 + L2 LINE L2 2127 3058 -214 205 239 0 22 chr5 64191655 64191701 -135438449 + MER91 DNA MER1_type 69 113 -83 30 0 0 0 chr5 64192153 64192183 -135437967 + AT_rich Low_complexity Low_complexity 1 30 0 4849 173 47 9 chr5 64192190 64193365 -135436785 - L1PA16 LINE L1 -26 6140 4918 222 37 0 0 chr5 64193864 64193891 -135436259 + (TG)n Simple_repeat Simple_repeat 1 27 0 197 348 109 11 chr5 64196119 64196211 -135433939 + MIR SINE MIR 48 148 -60 275 323 25 38 chr5 64196739 64196897 -135433253 + MLT1J LTR MaLR 342 497 -14 1751 247 58 16 chr5 64196905 64197403 -135432747 + LTR40a LTR ERVL 1 519 0 204 194 0 0 chr5 64197855 64197891 -135432259 + (ATG)n Simple_repeat Simple_repeat 1 36 0 2237 89 7 3 chr5 64198046 64198350 -135431800 + AluY SINE Alu 2 306 -5 2006 162 18 62 chr5 64198393 64198832 -135431318 + L1MC1 LINE L1 5897 6316 -17 346 278 9 120 chr5 64199079 64199295 -135430855 - L1MEd LINE L1 -5067 1052 861 24 32 0 0 chr5 64199379 64199410 -135430740 + AT_rich Low_complexity Low_complexity 1 31 0 387 326 113 0 chr5 64199427 64199568 -135430582 - MIR3 SINE MIR -19 189 33 211 264 0 99 chr5 64199879 64199970 -135430180 + L2 LINE L2 3228 3309 -4 276 302 89 50 chr5 64200108 64200287 -135429863 + MER117 DNA MER1_type 5 190 -7 319 220 34 93 chr5 64200935 64201053 -135429097 + L2 LINE L2 3203 3313 0 255 358 21 0 chr5 64201802 64201897 -135428253 - MIR3 SINE MIR -17 191 95 190 304 0 0 chr5 64203766 64203822 -135426328 - MIR SINE MIR -121 141 86 270 308 110 22 chr5 64203971 64204153 -135425997 - L2 LINE L2 -1 3312 3115 2810 96 33 2 chr5 64204516 64204942 -135425208 + L1PA14 LINE L1 5720 6158 -3 679 285 29 18 chr5 64205376 64205653 -135424497 + L1ME LINE L1 5506 5785 -336 198 264 116 41 chr5 64206770 64206891 -135423259 + L2 LINE L2 3113 3242 -71 931 127 0 0 chr5 64207107 64207241 -135422909 - THE1B LTR MaLR -166 198 65 308 193 0 0 chr5 64207724 64207781 -135422369 - MLT2B1 LTR ERVL 0 520 464 216 200 0 0 chr5 64207783 64207828 -135422322 + (TATG)n Simple_repeat Simple_repeat 2 46 0 613 222 10 9 chr5 64207954 64208105 -135422045 - MLT2B1 LTR ERVL -48 464 220 7728 21 1 0 chr5 64208117 64209025 -135421125 - L1PA3 LINE L1 -1435 4711 3803 7379 19 14 0 chr5 64209025 64210472 -135419678 + L1PA3 LINE L1 4689 6147 -8 1096 196 14 0 chr5 64210497 64210717 -135419433 - MLT2B1 LTR ERVL -295 225 3 361 330 37 11 chr5 64211337 64211525 -135418625 + MARNA DNA Mariner 283 475 -111 232 179 48 107 chr5 64212395 64212418 -135417732 + MLT1L LTR MaLR 358 381 -234 3307 162 60 28 chr5 64212418 64212868 -135417282 + MER67C LTR ERV1 3 484 -226 2831 7 0 0 chr5 64212868 64213178 -135416972 - AluYb8 SINE Alu -8 310 1 3307 162 60 28 chr5 64213178 64213413 -135416737 + MER67C LTR ERV1 484 710 0 232 179 48 107 chr5 64213413 64213473 -135416677 + MLT1L LTR MaLR 381 436 -179 189 330 82 10 chr5 64213640 64213737 -135416413 - MER5C DNA MER1_type -219 105 2 1833 159 0 0 chr5 64213767 64214044 -135416106 - AluSx SINE Alu -13 299 23 308 335 52 21 chr5 64214062 64214256 -135415894 - L1MC/D LINE L1 -1991 5817 5618 23 0 0 0 chr5 64215431 64215454 -135414696 + AT_rich Low_complexity Low_complexity 1 23 0 819 196 80 18 chr5 64215589 64215752 -135414398 + MER5A DNA MER1_type 17 189 0 5699 178 10 20 chr5 64215775 64217896 -135412254 - L1PA16 LINE L1 -1 6165 4068 4323 76 0 0 chr5 64217901 64218466 -135411684 - L1P LINE L1 -1856 4290 3726 2346 83 0 6 chr5 64218465 64218790 -135411360 + L1P LINE L1 1908 2230 -3916 * 3655 215 58 54 chr5 64218786 64220003 -135410147 - L1 LINE L1 -2152 3994 2774 274 317 45 9 chr5 64220014 64220159 -135409991 - MIR3 SINE MIR -73 135 3 3623 169 35 6 chr5 64221128 64221795 -135408355 + Tigger2 DNA MER2_type 1 686 -2032 24 0 0 0 chr5 64271859 64271883 -135358267 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr5 64272027 64272050 -135358100 + (CA)n Simple_repeat Simple_repeat 2 24 0 12632 98 5 9 chr5 64274149 64276788 -135353362 - L1PA8 LINE L1 -13 6159 3528 373 315 41 68 chr5 64277811 64278205 -135351945 + L1MEd LINE L1 3 385 -5734 216 0 0 0 chr5 64278271 64278295 -135351855 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 829 304 35 8 chr5 64278493 64278750 -135351400 - MLT2E LTR ERVL -354 274 11 226 260 28 72 chr5 64278844 64279025 -135351125 + MER69 DNA AcHobo 1199 1371 -1155 21 0 0 0 chr5 64279184 64279205 -135350945 + AT_rich Low_complexity Low_complexity 1 21 0 806 261 72 37 chr5 64279229 64279662 -135350488 + MER69 DNA AcHobo 1887 2334 -192 638 354 162 5 chr5 64279763 64280133 -135350017 - Zaphod DNA AcHobo -3511 520 93 2028 178 88 16 chr5 64280172 64280604 -135349546 - MLT1C LTR MaLR 0 467 5 1572 216 41 9 chr5 64280976 64281318 -135348832 - ERVL LTR ERVL -1262 4502 4150 385 261 30 37 chr5 64281347 64281481 -135348669 - MLT2F LTR ERVL -529 134 2 7472 27 3 0 chr5 64281627 64283155 -135346995 + L1PA4 LINE L1 4615 6147 -8 3568 257 53 28 chr5 64283169 64283651 -135346499 - L1MCb LINE L1 -3268 3296 2828 1925 146 20 38 chr5 64283651 64283994 -135346156 + MER1B DNA MER1_type 1 337 0 3568 257 53 28 chr5 64283994 64286385 -135343765 - L1MCb LINE L1 -3736 2828 205 189 0 0 0 chr5 64287136 64287157 -135342993 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 312 306 119 68 chr5 64287223 64287661 -135342489 + HAL1b LINE L1 248 707 -641 222 230 48 119 chr5 64287727 64287853 -135342297 - MER5A DNA MER1_type -71 118 2 * 350 344 7 92 chr5 64287853 64288133 -135342017 + L2 LINE L2 2177 2432 -882 351 278 105 31 chr5 64288437 64288599 -135341551 - L1M4 LINE L1 -2196 3950 3777 204 163 0 0 chr5 64288670 64288713 -135341437 + (CA)n Simple_repeat Simple_repeat 2 44 0 813 250 57 51 chr5 64288722 64289094 -135341056 + HAL1b LINE L1 406 779 -569 651 224 26 116 chr5 64290220 64290600 -135339550 - L1MC4 LINE L1 -5 8037 7692 * 3108 196 15 49 chr5 64290579 64290685 -135339465 - L1 LINE L1 -880 5266 5158 1871 144 7 4 chr5 64290685 64290962 -135339188 + AluSx SINE Alu 1 278 -34 306 0 0 0 chr5 64290962 64290996 -135339154 + (CA)n Simple_repeat Simple_repeat 2 35 0 3108 196 15 49 chr5 64290996 64291745 -135338405 - L1 LINE L1 -986 5160 4439 371 189 98 35 chr5 64291816 64291959 -135338191 - L1 LINE L1 -1675 4471 4320 846 139 46 7 chr5 64291959 64292110 -135338040 - L1PA15 LINE L1 0 6165 6009 13360 227 20 23 chr5 64292110 64296013 -135334137 - L1PA15-16 LINE L1 -1286 5563 1668 786 271 113 36 chr5 64296036 64296505 -135333645 - L1MC4a LINE L1 -1581 6227 5723 7260 143 34 28 chr5 64297892 64299314 -135330836 + L1P3 LINE L1 5 1434 -5027 711 220 6 19 chr5 64300394 64300553 -135329597 - L1MC4a LINE L1 -504 5662 5506 23 54 0 0 chr5 64300588 64300625 -135329525 + AT_rich Low_complexity Low_complexity 1 37 0 1591 207 7 0 chr5 64300627 64300917 -135329233 + AluSx SINE Alu 2 293 -19 676 0 24 0 chr5 64300917 64301001 -135329149 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 1180 277 94 7 chr5 64301028 64301722 -135328428 - L1 LINE L1 -3223 2923 2170 1944 223 103 0 chr5 64302925 64303383 -135326767 + MLT1D LTR MaLR 1 505 0 1936 236 63 47 chr5 64303389 64304035 -135326115 + MLT1D-int LTR MaLR 5 660 -711 781 229 8 78 chr5 64304089 64304333 -135325817 + MLT1D-int LTR MaLR 661 887 -484 1146 227 46 100 chr5 64304464 64304581 -135325569 + MLT1D-int LTR MaLR 963 1085 -286 3929 165 44 5 chr5 64304581 64305332 -135324818 - L1MC1 LINE L1 -5 6328 5549 1146 227 46 100 chr5 64305332 64305645 -135324505 + MLT1D-int LTR MaLR 1085 1370 -1 1260 248 117 11 chr5 64305646 64305997 -135324153 + MLT1D LTR MaLR 1 388 -117 392 0 21 0 chr5 64306527 64306575 -135323575 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 2070 143 0 0 chr5 64306581 64306875 -135323275 - AluSq SINE Alu -19 294 1 302 299 5 30 chr5 64306912 64307109 -135323041 - L1ME LINE L1 -302 5819 5628 3240 119 54 52 chr5 64307122 64307754 -135322396 - L1MA4 LINE L1 -6 6294 5662 397 206 132 110 chr5 64312702 64312838 -135317312 + MER5B DNA MER1_type 26 164 -14 4596 176 34 22 chr5 64313128 64314017 -135316133 - MER54A LTR ERVL -1 900 2 28 48 0 0 chr5 64314600 64314642 -135315508 + AT_rich Low_complexity Low_complexity 1 42 0 187 273 242 50 chr5 64315273 64315372 -135314778 - L2 LINE L2 -1 3271 3154 1341 240 14 7 chr5 64315389 64315676 -135314474 - MLT1E2 LTR MaLR 0 626 338 25 51 0 0 chr5 64315883 64315922 -135314228 + AT_rich Low_complexity Low_complexity 1 39 0 1988 142 0 19 chr5 64316245 64316579 -135313571 + AluSx SINE Alu 1 312 0 327 235 153 10 chr5 64318286 64318384 -135311766 + MLT1J LTR MaLR 39 150 -361 480 303 170 47 chr5 64318616 64319170 -135310980 + L1MC4a LINE L1 5320 5941 -1867 197 89 36 36 chr5 64319789 64319845 -135310305 + (CAA)n Simple_repeat Simple_repeat 1 56 0 340 273 98 8 chr5 64320354 64320486 -135309664 + MIR SINE MIR 119 262 0 23 33 0 0 chr5 64320882 64320912 -135309238 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 64321323 64321356 -135308794 + AT_rich Low_complexity Low_complexity 1 33 0 2013 132 0 0 chr5 64323705 64323986 -135306164 + AluSq SINE Alu 1 281 -32 368 213 87 47 chr5 64324543 64324670 -135305480 + MLT1B LTR MaLR 37 168 -381 238 236 146 27 chr5 64324816 64324926 -135305224 + MLT1F LTR MaLR 404 526 -16 258 189 108 72 chr5 64324955 64325066 -135305084 + MLT1F-int LTR MaLR 3 117 -1618 1206 116 164 7 chr5 64325681 64325877 -135304273 - Tigger3b DNA MER2_type -2202 826 573 1290 178 91 38 chr5 64325877 64326164 -135303986 - AluJo SINE Alu -10 302 1 1206 116 164 7 chr5 64326164 64326242 -135303908 - Tigger3b DNA MER2_type -2455 573 509 2351 36 0 0 chr5 64326242 64326520 -135303630 - L1P2 LINE L1 -391 5764 5487 2610 29 3 0 chr5 64326520 64326852 -135303298 + L1PA4 LINE L1 5831 6171 0 3141 146 7 33 chr5 64326852 64327395 -135302755 - Tigger3b DNA MER2_type -689 542 14 296 316 86 40 chr5 64327839 64327991 -135302159 + MIR3 SINE MIR 19 177 -31 182 310 134 47 chr5 64328175 64328346 -135301804 + MIR SINE MIR 20 205 -57 17521 189 21 8 chr5 64328635 64331748 -135298402 + L1PA14 LINE L1 20 3090 -4509 1732 161 15 11 chr5 64331748 64332021 -135298129 + AluSx SINE Alu 1 274 -38 17521 189 21 8 chr5 64332021 64333186 -135296964 + L1PA14 LINE L1 3090 4238 -3361 189 0 0 0 chr5 64333186 64333207 -135296943 + (TTG)n Simple_repeat Simple_repeat 2 22 0 17521 189 21 8 chr5 64333207 64335419 -135294731 + L1PA14 LINE L1 4238 6875 -724 487 164 58 10 chr5 64335415 64335519 -135294631 - L1M3 LINE L1 -492 5688 5580 * 4611 108 8 4 chr5 64335521 64336231 -135293919 + L1PA14 LINE L1 6884 7596 -3 1792 141 61 61 chr5 64337425 64337800 -135292350 + THE1C LTR MaLR 1 375 0 756 223 41 55 chr5 64339138 64339358 -135290792 + MLT1B LTR MaLR 174 390 0 933 332 108 17 chr5 64340458 64340990 -135289160 - L2 LINE L2 0 3313 2714 1679 157 0 14 chr5 64341048 64341335 -135288815 + AluJo SINE Alu 1 283 -29 443 351 6 0 chr5 64341579 64341744 -135288406 + MIR SINE MIR 87 252 -10 591 355 115 11 chr5 64341820 64342455 -135287695 + L2 LINE L2 2613 3313 0 512 213 91 91 chr5 64342865 64343118 -135287032 + MER112 DNA MER1_type 1 253 -3 308 272 86 0 chr5 64343156 64343237 -135286913 - L1MC4 LINE L1 -1335 6707 6620 402 39 0 0 chr5 64343465 64343517 -135286633 + (CA)n Simple_repeat Simple_repeat 2 53 0 196 135 19 19 chr5 64343844 64343896 -135286254 + (TA)n Simple_repeat Simple_repeat 1 52 0 301 339 8 0 chr5 64344108 64344229 -135285921 - MER94 DNA DNA -4 130 9 300 384 70 12 chr5 64344332 64344504 -135285646 - MIR SINE MIR -79 183 2 28 0 0 0 chr5 64344854 64344882 -135285268 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 64345361 64345387 -135284763 + AT_rich Low_complexity Low_complexity 1 26 0 210 37 0 0 chr5 64345693 64345720 -135284430 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 225 178 0 0 chr5 64346057 64346102 -135284048 + A-rich Low_complexity Low_complexity 1 45 0 206 292 79 22 chr5 64346207 64346296 -135283854 + MIR3 SINE MIR 62 155 -53 296 311 30 30 chr5 64346347 64346514 -135283636 + MER58B DNA MER1_type 175 341 0 22 56 0 0 chr5 64346912 64346948 -135283202 + AT_rich Low_complexity Low_complexity 1 36 0 2072 114 40 0 chr5 64347902 64348199 -135281951 - AluSc SINE Alu 0 309 1 4222 256 48 65 chr5 64348264 64348803 -135281347 + L1M4 LINE L1 14 561 -6085 2437 83 3 0 chr5 64348803 64349115 -135281035 + AluSp SINE Alu 1 313 0 4222 256 48 65 chr5 64349115 64350908 -135279242 + L1M4 LINE L1 561 2411 -4235 4658 239 76 27 chr5 64350980 64351345 -135278805 + L1M4 LINE L1 3871 4216 -2466 1974 90 0 4 chr5 64351345 64351600 -135278550 + AluSc SINE Alu 40 293 -16 4658 239 76 27 chr5 64351600 64351979 -135278171 + L1M4 LINE L1 4216 4575 -2107 218 79 0 26 chr5 64351979 64352017 -135278133 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 4658 239 76 27 chr5 64352017 64352429 -135277721 + L1M4 LINE L1 4575 4965 -1717 257 51 26 0 chr5 64352429 64352468 -135277682 + (TTG)n Simple_repeat Simple_repeat 3 42 0 4658 239 76 27 chr5 64352468 64353582 -135276568 + L1M4 LINE L1 4965 6257 -425 262 42 42 21 chr5 64353589 64353637 -135276513 + (TTTTA)n Simple_repeat Simple_repeat 3 51 0 22 0 0 0 chr5 64353637 64353659 -135276491 + AT_rich Low_complexity Low_complexity 1 22 0 1079 191 93 4 chr5 64353659 64353884 -135276266 - MLT1D LTR MaLR -13 492 248 258 197 14 28 chr5 64354049 64354120 -135276030 + MLT1K LTR MaLR 514 583 -5 2898 162 6 2 chr5 64354148 64354642 -135275508 + LOR1a LTR ERV1 1 496 -1 2073 121 4 0 chr5 64354656 64354937 -135275213 + AluSx SINE Alu 1 282 -30 294 149 0 0 chr5 64355049 64355096 -135275054 + U5 snRNA snRNA 1 47 -69 29 0 0 0 chr5 64355480 64355509 -135274641 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr5 64355565 64355595 -135274555 + AT_rich Low_complexity Low_complexity 1 30 0 337 279 73 84 chr5 64355700 64355879 -135274271 + MER5A DNA MER1_type 11 187 -2 25 0 0 0 chr5 64356935 64356960 -135273190 + AT_rich Low_complexity Low_complexity 1 25 0 25 90 0 0 chr5 64357092 64357159 -135272991 + AT_rich Low_complexity Low_complexity 1 67 0 758 122 0 9 chr5 64357886 64358001 -135272149 + MSTB1 LTR MaLR 4 117 -315 463 193 11 0 chr5 64357989 64358077 -135272073 + MSTB1 LTR MaLR 329 417 -15 * 1195 277 70 3 chr5 64358103 64358674 -135271476 - L1MCb LINE L1 -2678 3886 3278 * 5276 47 3 0 chr5 64358667 64359332 -135270818 - L1PA4 LINE L1 -3695 2451 1785 24173 31 3 0 chr5 64359332 64363028 -135267122 + L1PA4 LINE L1 2444 6147 -8 3576 257 53 27 chr5 64363042 64363527 -135266623 - L1MCb LINE L1 -3268 3296 2825 1904 149 20 38 chr5 64363527 64363870 -135266280 + MER1B DNA MER1_type 1 337 0 3576 257 53 27 chr5 64363870 64366261 -135263889 - L1MCb LINE L1 -3739 2825 205 318 294 11 11 chr5 64366340 64366432 -135263718 - L1MCb LINE L1 -6314 250 159 189 0 0 0 chr5 64367016 64367037 -135263113 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 200 238 48 119 chr5 64367605 64367731 -135262419 - MER5A DNA MER1_type -71 118 2 * 350 344 7 92 chr5 64367731 64368011 -135262139 + L2 LINE L2 2177 2432 -882 253 252 109 27 chr5 64368315 64368462 -135261688 - L1M4 LINE L1 -2196 3950 3792 204 163 0 0 chr5 64368549 64368592 -135261558 + (CA)n Simple_repeat Simple_repeat 2 44 0 844 261 54 48 chr5 64368601 64368973 -135261177 + HAL1b LINE L1 406 779 -569 320 265 96 12 chr5 64369477 64369643 -135260507 + L1M4 LINE L1 2360 2539 -3607 686 224 26 116 chr5 64370102 64370482 -135259668 - L1MC4 LINE L1 -5 8037 7692 * 3328 196 14 45 chr5 64370461 64370567 -135259583 - L1 LINE L1 -880 5266 5158 1891 137 7 4 chr5 64370567 64370844 -135259306 + AluSx SINE Alu 1 278 -34 378 0 0 0 chr5 64370844 64370886 -135259264 + (CA)n Simple_repeat Simple_repeat 2 43 0 3328 196 14 45 chr5 64370886 64371632 -135258518 - L1 LINE L1 -986 5160 4439 450 206 118 0 chr5 64371699 64371835 -135258315 - L1 LINE L1 -1675 4471 4320 860 120 53 7 chr5 64371835 64371985 -135258165 - L1PA15 LINE L1 0 6165 6009 2299 204 56 16 chr5 64371985 64372543 -135257607 - L1P LINE L1 -1286 4860 4281 30139 100 15 21 chr5 64372725 64378297 -135251853 + L1PA7 LINE L1 622 6153 -1 1157 290 43 67 chr5 64379121 64379655 -135250495 - LTR33 LTR ERVL 0 521 1 221 320 0 13 chr5 64379738 64379813 -135250337 + MIR SINE MIR 32 105 -157 221 246 0 0 chr5 64380289 64380354 -135249796 + A-rich Low_complexity Low_complexity 1 65 0 295 190 0 0 chr5 64381598 64381656 -135248494 + MLT1F LTR MaLR 5 62 -533 714 177 0 8 chr5 64381658 64381782 -135248368 - FLAM_A SINE Alu -12 130 8 438 285 93 57 chr5 64381787 64382253 -135247897 + MLT1F LTR MaLR 52 530 -12 1978 130 24 7 chr5 64382348 64382640 -135247510 - AluSx SINE Alu -9 303 7 341 262 86 119 chr5 64383206 64383416 -135246734 - L1ME LINE L1 -557 5564 5362 7609 29 0 0 chr5 64383443 64384986 -135245164 - L1PA3 LINE L1 0 6155 4615 383 277 15 44 chr5 64385132 64385269 -135244881 + MLT2F LTR ERVL 2 134 -529 1640 225 35 3 chr5 64385299 64385641 -135244509 + ERVL LTR ERVL 4150 4502 -1262 2028 178 88 16 chr5 64386011 64386443 -135243707 + MLT1C LTR MaLR 5 467 0 758 356 144 0 chr5 64386482 64386856 -135243294 + Zaphod DNA AcHobo 93 520 -3511 * 820 246 71 38 chr5 64386842 64387391 -135242759 - MER69 DNA AcHobo -42 2484 1887 21 0 0 0 chr5 64387415 64387436 -135242714 + AT_rich Low_complexity Low_complexity 1 21 0 242 262 22 77 chr5 64387595 64387778 -135242372 - MER69 DNA AcHobo -1155 1371 1199 829 304 35 8 chr5 64387872 64388129 -135242021 + MLT2E LTR ERVL 11 274 -354 216 0 0 0 chr5 64388327 64388351 -135241799 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 373 315 41 68 chr5 64388417 64388811 -135241339 - L1MEd LINE L1 -5734 385 3 12420 99 4 2 chr5 64389833 64392471 -135237679 + L1PA8 LINE L1 3528 6159 -13 2456 243 33 40 chr5 64392474 64393326 -135236824 + L1ME2 LINE L1 5318 6163 -1 199 327 18 0 chr5 64393326 64393381 -135236769 + L3 LINE CR1 1412 1467 -110 396 194 82 41 chr5 64395518 64395616 -135234534 - MLT1J2 LTR MaLR 0 450 349 440 230 37 45 chr5 64395673 64395869 -135234281 - MLT1J2 LTR MaLR -243 203 6 2266 97 132 5 chr5 64395901 64396281 -135233869 + MSTA LTR MaLR 1 428 0 2502 238 29 62 chr5 64397343 64398084 -135232066 + L1MCa LINE L1 2 665 -5380 1792 113 104 45 chr5 64398084 64398438 -135231712 + THE1C LTR MaLR 1 375 0 2502 238 29 62 chr5 64398438 64398569 -135231581 + L1MCa LINE L1 665 799 -5246 433 268 6 13 chr5 64398578 64398735 -135231415 + L1MCa LINE L1 765 920 -5125 1349 251 32 16 chr5 64398763 64399194 -135230956 + L1M4 LINE L1 3771 4208 -1938 24 32 0 0 chr5 64399706 64399737 -135230413 + AT_rich Low_complexity Low_complexity 1 31 0 314 339 82 49 chr5 64400655 64400959 -135229191 + L1MCb LINE L1 48 361 -5684 3450 277 68 20 chr5 64401012 64402215 -135227935 + L1M4 LINE L1 2767 4070 -2076 367 115 39 0 chr5 64402215 64402293 -135227857 - L1MA7 LINE L1 -5 6286 6206 3450 277 68 20 chr5 64402293 64402715 -135227435 + L1M4 LINE L1 4070 4470 -1676 182 37 37 0 chr5 64402946 64402973 -135227177 + (TTG)n Simple_repeat Simple_repeat 2 29 0 25 31 0 0 chr5 64403647 64403679 -135226471 + AT_rich Low_complexity Low_complexity 1 32 0 538 79 0 0 chr5 64404280 64404356 -135225794 + Alu SINE Alu 1 76 -234 305 290 65 36 chr5 64404723 64404751 -135225399 - L1ME2 LINE L1 -50 6114 6088 1624 134 24 144 chr5 64404751 64405132 -135225018 + MER1B DNA MER1_type 1 335 -2 305 290 65 36 chr5 64405132 64405241 -135224909 - L1ME2 LINE L1 -76 6088 5973 786 168 201 4 chr5 64405939 64406183 -135223967 + L1ME3A LINE L1 5665 5956 -214 422 204 195 0 chr5 64406455 64406568 -135223582 + MIR SINE MIR 72 206 -56 224 261 128 18 chr5 64407090 64407200 -135222950 - MIR SINE MIR -84 178 41 471 322 159 0 chr5 64407790 64408004 -135222146 - MIR SINE MIR -2 260 13 312 181 57 76 chr5 64408115 64408220 -135221930 + L1MC4 LINE L1 6614 6716 -1326 * 318 293 85 70 chr5 64408209 64408479 -135221671 - L1M4 LINE L1 -2498 3648 3375 550 264 44 23 chr5 64409204 64409436 -135220714 + L1ME3A LINE L1 5919 6168 -2 36 53 0 0 chr5 64409786 64409843 -135220307 + AT_rich Low_complexity Low_complexity 1 57 0 407 319 96 45 chr5 64410589 64411016 -135219134 + L1M4 LINE L1 4384 4832 -1314 218 114 0 45 chr5 64411397 64411441 -135218709 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 605 236 55 16 chr5 64412219 64412401 -135217749 - MER5A DNA MER1_type 0 189 1 414 299 162 39 chr5 64412617 64412851 -135217299 - L2 LINE L2 -555 2759 2497 183 42 0 0 chr5 64413098 64413122 -135217028 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 213 39 0 0 chr5 64414768 64414794 -135215356 + (TG)n Simple_repeat Simple_repeat 1 26 0 27 49 0 0 chr5 64415435 64415476 -135214674 + AT_rich Low_complexity Low_complexity 1 41 0 23 33 0 0 chr5 64415922 64415952 -135214198 + AT_rich Low_complexity Low_complexity 1 30 0 1509 266 58 24 chr5 64416166 64416876 -135213274 - L1M4 LINE L1 -1390 4992 4259 2292 88 9 35 chr5 64416881 64417198 -135212952 - AluSx SINE Alu -3 309 1 2731 171 14 6 chr5 64417198 64417706 -135212444 - L1MC1 LINE L1 -10 6323 5812 765 197 44 6 chr5 64417709 64417892 -135212258 - L1MCa LINE L1 -5300 1126 937 272 218 10 20 chr5 64418368 64418469 -135211681 + (TTATA)n Simple_repeat Simple_repeat 5 104 0 3754 154 75 8 chr5 64418756 64418796 -135211354 + MER50 LTR ERV1 1 37 -697 246 32 0 0 chr5 64418796 64418827 -135211323 + (CA)n Simple_repeat Simple_repeat 1 31 0 3754 154 75 8 chr5 64418827 64419453 -135210697 + MER50 LTR ERV1 37 712 -22 256 48 48 0 chr5 64419525 64419567 -135210583 + (TA)n Simple_repeat Simple_repeat 1 44 0 1358 192 17 31 chr5 64420852 64421143 -135209007 + AluJo SINE Alu 2 288 -14 21 57 0 0 chr5 64421451 64421486 -135208664 + AT_rich Low_complexity Low_complexity 1 35 0 587 241 158 20 chr5 64421706 64422115 -135208035 - L1M4 LINE L1 -3592 2790 2319 1054 248 83 19 chr5 64422270 64422693 -135207457 + HAL1 LINE L1 1316 1765 -742 586 85 53 0 chr5 64424391 64424485 -135205665 + HY1 scRNA scRNA 13 111 -1 276 204 0 0 chr5 64424893 64424942 -135205208 - MER5B DNA MER1_type 0 178 130 183 80 0 0 chr5 64424963 64424988 -135205162 + (TC)n Simple_repeat Simple_repeat 2 26 0 1274 125 18 31 chr5 64425048 64425272 -135204878 - THE1C LTR MaLR -2 373 153 8772 37 3 0 chr5 64425272 64426693 -135203457 + L1PA4 LINE L1 4305 5730 -425 2283 40 0 0 chr5 64426699 64427005 -135203145 + L1PA4 LINE L1 5874 6155 0 865 170 6 19 chr5 64427005 64427145 -135203005 - THE1C LTR MaLR -211 164 27 706 267 90 112 chr5 64427145 64428154 -135201996 + LTR28 LTR ERV1 1 1755 0 24216 145 21 9 chr5 64428247 64435004 -135195146 + LTR28-int LTR ERV1 1 7091 0 718 263 236 87 chr5 64435013 64435960 -135194190 + MER52A LTR ERV1 667 1755 0 564 306 20 17 chr5 64436070 64436470 -135193680 - L1MEc LINE L1 -3711 2504 2145 1666 246 126 19 chr5 64436511 64437076 -135193074 - L1MD1 LINE L1 -15 6227 5603 775 267 58 33 chr5 64437144 64437417 -135192733 + L1ME1 LINE L1 5878 6165 -1 1969 203 39 9 chr5 64437491 64437924 -135192226 - L1MD2 LINE L1 -13 6346 5901 239 185 0 56 chr5 64437932 64437986 -135192164 + MER5A DNA MER1_type 136 186 -3 349 278 95 88 chr5 64438228 64438315 -135191835 - L1MD2 LINE L1 -440 5681 5596 1061 137 0 16 chr5 64438315 64438497 -135191653 - L1MB1 LINE L1 -5 6163 5985 349 278 95 88 chr5 64438497 64438682 -135191468 - L1MD2 LINE L1 -525 5596 5407 26 0 0 0 chr5 64438891 64438917 -135191233 + AT_rich Low_complexity Low_complexity 1 26 0 1330 79 11 6 chr5 64439429 64439607 -135190543 - L1PA10 LINE L1 -15 6153 5975 2017 196 38 80 chr5 64439780 64440358 -135189792 + MLT2B3 LTR ERVL 1 554 0 240 314 12 23 chr5 64440527 64440613 -135189537 - L2 LINE L2 -57 3256 3172 2266 79 0 3 chr5 64441336 64441628 -135188522 - AluY SINE Alu -20 291 1 302 351 138 0 chr5 64441777 64442002 -135188148 + MIR SINE MIR 2 257 -5 7605 29 0 0 chr5 64443609 64444755 -135185395 + L1PA4 LINE L1 5007 6152 -3 1502 237 25 11 chr5 64444902 64445261 -135184889 + MLT2D LTR ERVL 1 364 -50 198 0 0 0 chr5 64445262 64445284 -135184866 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 243 0 0 0 chr5 64445283 64445310 -135184840 + (GA)n Simple_repeat Simple_repeat 2 28 0 24 0 0 0 chr5 64445455 64445479 -135184671 + AT_rich Low_complexity Low_complexity 1 24 0 252 238 0 0 chr5 64445498 64445561 -135184589 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 287 280 0 13 chr5 64445816 64445891 -135184259 - LTR16C LTR ERVL 0 491 418 398 373 88 25 chr5 64445943 64446227 -135183923 - LTR16C LTR ERVL -189 302 1 230 227 173 0 chr5 64446494 64446569 -135183581 - MLT1L LTR MaLR -220 395 308 42689 45 6 2 chr5 64446645 64452770 -135177380 + L1PA3 LINE L1 3 6155 0 241 217 76 43 chr5 64452865 64452957 -135177193 - LTR67 LTR ERVL -22 535 441 2104 125 0 0 chr5 64453287 64453590 -135176560 + AluSg1 SINE Alu 1 303 -6 347 285 56 58 chr5 64455729 64456125 -135174025 + L1M4 LINE L1 3353 3747 -2399 2845 16 0 0 chr5 64456397 64456714 -135173436 - AluYb8 SINE Alu 0 318 2 305 305 32 32 chr5 64456908 64457062 -135173088 - MIR SINE MIR -75 187 34 2087 103 0 0 chr5 64457969 64458241 -135171909 - AluSg SINE Alu -38 272 1 604 60 0 0 chr5 64458313 64458396 -135171754 + Alu SINE Alu 224 306 -3 2278 161 10 21 chr5 64459249 64459635 -135170515 + MSTC LTR MaLR 17 398 -30 21 36 0 0 chr5 64460281 64460309 -135169841 + AT_rich Low_complexity Low_complexity 1 28 0 194 0 39 0 chr5 64460743 64460769 -135169381 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1722 211 18 18 chr5 64461171 64461569 -135168581 + L1M4c LINE L1 1411 1808 -4576 330 243 54 36 chr5 64461573 64461684 -135168466 + L1M4c LINE L1 1931 2043 -4341 227 269 21 41 chr5 64461684 64461829 -135168321 + HAL1 LINE L1 1011 1152 -1355 * 959 253 34 17 chr5 64461824 64461873 -135168277 - L1MDb LINE L1 -917 6648 6601 189 74 0 0 chr5 64461873 64461900 -135168250 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 959 253 34 17 chr5 64461900 64462206 -135167944 - L1MDb LINE L1 -964 6601 6287 881 245 54 54 chr5 64462230 64462748 -135167402 - L1MDb LINE L1 -1832 5733 5216 1045 261 50 96 chr5 64462810 64463068 -135167082 - L1MDb LINE L1 -2337 5228 4960 2361 178 32 86 chr5 64463068 64463653 -135166497 + MLT2B3 LTR ERVL 1 554 0 1045 261 50 96 chr5 64463653 64464302 -135165848 - L1MDb LINE L1 -2605 4960 4363 5905 40 1 1 chr5 64464322 64465042 -135165108 - L1PA3 LINE L1 -3 6152 5433 8783 31 8 1 chr5 64465157 64466229 -135163921 - L1PA3 LINE L1 -1125 5021 3943 268 202 23 23 chr5 64466217 64466303 -135163847 - L1MDb LINE L1 -3211 4354 4269 * 2117 145 36 20 chr5 64466316 64466674 -135163476 + THE1B LTR MaLR 1 364 0 232 209 99 64 chr5 64466732 64466904 -135163246 - L1MDb LINE L1 -3895 3670 3493 * 671 197 47 71 chr5 64466894 64467298 -135162852 - L1MDb LINE L1 -4930 2635 2242 3191 111 48 14 chr5 64467756 64468272 -135161878 - L1PA15 LINE L1 -3 6162 5629 612 120 0 0 chr5 64468288 64468380 -135161770 - L1M4 LINE L1 -5011 2554 2463 * 2455 194 24 54 chr5 64468370 64468962 -135161188 - L1M4 LINE L1 -6960 605 32 394 207 26 141 chr5 64468965 64469192 -135160958 - L1MEc LINE L1 -4631 1765 1565 297 250 93 29 chr5 64469207 64469347 -135160803 - L1MEc LINE L1 -4815 1400 1252 29 28 0 0 chr5 64469360 64469396 -135160754 + AT_rich Low_complexity Low_complexity 1 36 0 2349 159 14 5 chr5 64469411 64469846 -135160304 - L1MA4 LINE L1 -16 6284 5846 3519 139 5 5 chr5 64469846 64470471 -135159679 + L1MA4 LINE L1 5217 5841 -459 1879 267 60 23 chr5 64470581 64471478 -135158672 - L1MEc LINE L1 -5217 1179 207 270 0 0 0 chr5 64471731 64471761 -135158389 + (CA)n Simple_repeat Simple_repeat 2 31 0 247 359 65 22 chr5 64471892 64472076 -135158074 + MIR SINE MIR 57 248 -14 23 86 0 0 chr5 64473399 64473457 -135156693 + AT_rich Low_complexity Low_complexity 1 58 0 34 65 0 0 chr5 64473579 64473641 -135156509 + AT_rich Low_complexity Low_complexity 1 62 0 435 275 111 34 chr5 64474509 64474716 -135155434 - L2 LINE L2 -9 3304 3082 1131 193 109 4 chr5 64477429 64477703 -135152447 - L1ME3 LINE L1 -2 6160 5858 7513 28 3 0 chr5 64478828 64479958 -135150192 - L1PA3 LINE L1 -3 6152 5024 4136 31 0 21 chr5 64479958 64480092 -135150058 + L1P LINE L1 4523 4658 -1488 2724 29 0 3 chr5 64480092 64480403 -135149747 + AluYa5 SINE Alu 1 310 -1 4136 31 0 21 chr5 64480403 64480779 -135149371 + L1P LINE L1 4658 5022 -1124 220 26 0 51 chr5 64481035 64481074 -135149076 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1061 264 42 34 chr5 64482275 64482654 -135147496 + MER93a LTR ERV1 21 402 0 1154 271 14 18 chr5 64482664 64482948 -135147202 + MLT1I LTR MaLR 80 362 -47 21 0 0 0 chr5 64483782 64483803 -135146347 + AT_rich Low_complexity Low_complexity 1 21 0 2271 84 14 3 chr5 64483876 64484172 -135145978 - AluSp SINE Alu -12 301 3 598 318 96 0 chr5 64484624 64484844 -135145306 + MIR SINE MIR 12 252 -10 25 0 0 0 chr5 64484869 64484894 -135145256 + AT_rich Low_complexity Low_complexity 1 25 0 384 103 0 0 chr5 64485282 64485340 -135144810 + (TG)n Simple_repeat Simple_repeat 1 58 0 787 272 146 41 chr5 64485934 64486419 -135143731 + MLT1G1 LTR MaLR 16 551 -44 25 0 0 0 chr5 64486421 64486446 -135143704 + AT_rich Low_complexity Low_complexity 1 25 0 2252 90 0 17 chr5 64486453 64486752 -135143398 + AluSg SINE Alu 1 294 -16 3003 174 34 14 chr5 64486753 64487375 -135142775 - L1MB4 LINE L1 -5 6175 5542 287 282 26 17 chr5 64487972 64488089 -135142061 - MER103 DNA DNA -48 118 1 799 177 67 12 chr5 64488502 64488666 -135141484 + MER5B DNA MER1_type 4 176 -2 712 276 35 43 chr5 64489522 64489718 -135140432 + MIR SINE MIR 11 206 -56 258 32 0 0 chr5 64489718 64489749 -135140401 + (CA)n Simple_repeat Simple_repeat 2 32 0 712 276 35 43 chr5 64489749 64489806 -135140344 + MIR SINE MIR 206 262 0 21 0 0 0 chr5 64490919 64490940 -135139210 + AT_rich Low_complexity Low_complexity 1 21 0 11568 34 2 14 chr5 64490940 64493178 -135136972 - L1PA4 LINE L1 0 6155 3935 8410 43 0 0 chr5 64493178 64494226 -135135924 + L1PA4 LINE L1 2877 3924 -2222 231 288 0 0 chr5 64494772 64494831 -135135319 + (CATA)n Simple_repeat Simple_repeat 3 61 0 1197 170 5 28 chr5 64494865 64495083 -135135067 + AluJb SINE Alu 90 302 -10 9510 124 46 5 chr5 64495677 64497181 -135132969 - Tigger1 DNA MER2_type -1 2417 852 3630 176 15 0 chr5 64497170 64497785 -135132365 - Tigger1 DNA MER2_type -1794 624 1 * 400 333 178 28 chr5 64497833 64498220 -135131930 - L3 LINE CR1 -7 1570 1126 26 0 0 0 chr5 64498223 64498249 -135131901 + AT_rich Low_complexity Low_complexity 1 26 0 2098 147 36 28 chr5 64498286 64498647 -135131503 + THE1B LTR MaLR 1 364 0 1901 164 31 21 chr5 64499006 64499395 -135130755 - L1MB1 LINE L1 0 6168 5776 1355 154 29 36 chr5 64499395 64499674 -135130476 - L1MB1 LINE L1 -627 5556 5280 263 200 29 14 chr5 64499990 64500060 -135130090 - L2 LINE L2 0 3313 3243 497 242 91 30 chr5 64500277 64500508 -135129642 + HsTC2 DNA Tc2 1326 1746 -152 534 230 142 4 chr5 64500543 64500769 -135129381 + HsTC2 DNA Tc2 1638 1894 -4 180 338 98 36 chr5 64501509 64501814 -135128336 + L2 LINE L2 2898 3221 -92 409 94 78 0 chr5 64503204 64503268 -135126882 - MER116 DNA Mariner -9 71 3 2193 87 6 13 chr5 64503948 64504259 -135125891 + L1PA10 LINE L1 5860 6168 0 321 26 0 0 chr5 64504900 64504938 -135125212 + (TA)n Simple_repeat Simple_repeat 2 39 0 739 158 45 113 chr5 64505290 64505511 -135124639 + L1MA10 LINE L1 6022 6227 -107 2852 117 3 108 chr5 64505565 64506155 -135123995 - L1PB4 LINE L1 -8 6148 5621 1660 194 0 26 chr5 64506227 64506537 -135123613 + AluJo SINE Alu 1 302 -10 28 61 0 0 chr5 64506607 64506656 -135123494 + AT_rich Low_complexity Low_complexity 1 49 0 474 217 0 0 chr5 64506939 64507054 -135123096 + CT-rich Low_complexity Low_complexity 2 116 0 268 375 45 69 chr5 64507698 64508031 -135122119 - L2 LINE L2 0 3272 2948 231 258 32 0 chr5 64508056 64508118 -135122032 + MER117 DNA MER1_type 96 159 -38 465 269 53 47 chr5 64508455 64508626 -135121524 - MLT1H LTR MaLR 0 549 378 8276 47 0 0 chr5 64508754 64509786 -135120364 - L1P LINE L1 -3894 2252 1221 1332 201 21 87 chr5 64510023 64510615 -135119535 + L1ME LINE L1 5068 5614 -550 2139 128 0 0 chr5 64510631 64510920 -135119230 + AluSx SINE Alu 1 289 -23 2448 81 3 0 chr5 64511961 64512271 -135117879 - AluSp SINE Alu -2 311 1 1943 132 23 26 chr5 64512951 64513293 -135116857 + Tigger2a DNA MER2_type 2 342 -92 4130 105 15 0 chr5 64513293 64513883 -135116267 + MER4A LTR ERV1 1 599 -1 905 249 46 8 chr5 64513885 64514122 -135116028 - PABL_B LTR ERV1 0 667 422 356 301 7 33 chr5 64514138 64514291 -135115859 - PABL_B LTR ERV1 -518 149 1 262 146 0 0 chr5 64514291 64514332 -135115818 - PABL_B-int LTR ERV1 0 5015 4975 1124 283 50 3 chr5 64514399 64514682 -135115468 - PABL_B-int LTR ERV1 -64 7058 6763 867 206 25 0 chr5 64514685 64514845 -135115305 - PABL_B-int LTR ERV1 -1349 5773 5610 349 226 56 62 chr5 64515740 64515935 -135114215 + L1M4 LINE L1 3790 3983 -2163 632 276 27 11 chr5 64516168 64516353 -135113797 - MER5A DNA MER1_type -1 188 1 1996 171 114 5 chr5 64516398 64516784 -135113366 - MSTA LTR MaLR 0 428 1 1871 130 65 19 chr5 64517117 64517439 -135112711 - MER1B DNA MER1_type 0 337 1 499 328 8 34 chr5 64518455 64518690 -135111460 - ERVL LTR ERVL -2324 3440 3212 358 262 0 28 chr5 64518761 64518868 -135111282 - ERVL LTR ERVL -3264 2221 2118 573 322 86 33 chr5 64518948 64519345 -135110805 - ERVL LTR ERVL -2997 1999 1582 21 0 0 0 chr5 64521611 64521632 -135108518 + AT_rich Low_complexity Low_complexity 1 21 0 222 204 0 0 chr5 64521878 64521922 -135108228 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 181 388 125 12 chr5 64522977 64523217 -135106933 - L2 LINE L2 -669 2645 2379 2702 243 35 7 chr5 64523335 64523937 -135106213 - PABL_B-int LTR ERV1 -1578 5544 4926 * 6477 249 18 15 chr5 64523933 64525189 -135104961 - PABL_B-int LTR ERV1 -3061 4061 2800 2098 131 17 0 chr5 64525189 64525487 -135104663 - AluSq SINE Alu -10 303 1 6477 249 18 15 chr5 64525487 64525598 -135104552 - PABL_B-int LTR ERV1 -4322 2800 2691 795 260 48 26 chr5 64525597 64525980 -135104170 - PABL_B-int LTR ERV1 -5753 1369 890 * 1441 272 18 39 chr5 64525983 64526744 -135103406 - PABL_B-int LTR ERV1 -4645 370 42 987 212 27 46 chr5 64526767 64527026 -135103124 - PABL_B LTR ERV1 0 667 414 346 274 26 52 chr5 64527027 64527180 -135102970 - PABL_B LTR ERV1 -518 149 1 530 202 32 0 chr5 64527182 64527276 -135102874 + Tigger2 DNA MER2_type 2622 2718 0 331 302 138 7 chr5 64528223 64528528 -135101622 + L1ME3A LINE L1 3445 3789 -2357 1062 277 71 32 chr5 64528545 64529094 -135101056 + L1ME3A LINE L1 5478 6064 -106 180 0 0 0 chr5 64529094 64529114 -135101036 + (ATG)n Simple_repeat Simple_repeat 2 21 0 1062 277 71 32 chr5 64529114 64529217 -135100933 + L1ME3A LINE L1 6064 6162 -8 215 305 21 53 chr5 64529270 64529365 -135100785 - MIR3 SINE MIR -3 205 114 2330 84 0 3 chr5 64532177 64532474 -135097676 + AluY SINE Alu 1 296 -15 319 301 73 73 chr5 64532655 64532874 -135097276 - HAL1 LINE L1 -13 2494 2276 694 253 87 49 chr5 64533313 64533620 -135096530 - MLT1G LTR MaLR -214 376 58 910 57 0 32 chr5 64533710 64533834 -135096316 - L1PB1 LINE L1 -3 6148 6029 26 52 0 17 chr5 64535081 64535101 -135095049 + AT_rich Low_complexity Low_complexity 1 20 -37 2222 75 0 17 chr5 64535101 64535393 -135094757 + AluY SINE Alu 1 287 -24 26 52 0 17 chr5 64535393 64535430 -135094720 + AT_rich Low_complexity Low_complexity 20 57 0 255 344 141 31 chr5 64536127 64536290 -135093860 - MIR3 SINE MIR -12 196 16 6540 201 25 12 chr5 64536632 64538770 -135091380 + L1PA15 LINE L1 3998 6157 -8 446 259 173 23 chr5 64539943 64540163 -135089987 - L1ME3A LINE L1 0 6170 5918 548 268 16 0 chr5 64540163 64540286 -135089864 - MLT1J1 LTR MaLR -260 186 62 314 384 0 0 chr5 64540526 64540651 -135089499 + L1MC4 LINE L1 6579 6703 -1339 210 0 71 48 chr5 64540701 64540743 -135089407 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 201 211 0 0 chr5 64540801 64540853 -135089297 + (TA)n Simple_repeat Simple_repeat 2 53 0 1579 208 72 8 chr5 64541051 64541411 -135088739 + MLT1B LTR MaLR 1 383 -7 1955 135 21 0 chr5 64542764 64543045 -135087105 + AluSx SINE Alu 2 288 -24 22 35 0 0 chr5 64543045 64543074 -135087076 + AT_rich Low_complexity Low_complexity 1 29 0 414 328 71 35 chr5 64545882 64546080 -135084070 + MIR SINE MIR 48 252 -10 193 345 44 18 chr5 64546646 64546759 -135083391 - L3 LINE CR1 -364 1213 1098 1917 143 13 7 chr5 64548748 64549056 -135081094 - AluSx SINE Alu 0 312 3 1514 233 37 26 chr5 64549373 64549750 -135080400 - MLT1B LTR MaLR -6 384 4 499 276 56 47 chr5 64551029 64551243 -135078907 + MIR SINE MIR 2 217 -45 233 206 41 0 chr5 64553321 64553418 -135076732 + (TA)n Simple_repeat Simple_repeat 2 102 0 24 77 0 0 chr5 64553465 64553517 -135076633 + AT_rich Low_complexity Low_complexity 1 52 0 306 0 0 0 chr5 64553898 64553932 -135076218 + (TG)n Simple_repeat Simple_repeat 1 34 0 1605 141 7 29 chr5 64554912 64555188 -135074962 + AluSx SINE Alu 39 308 -4 2346 162 52 7 chr5 64556234 64556642 -135073508 + MSTB LTR MaLR 1 426 0 222 222 37 0 chr5 64556664 64556718 -135073432 + CT-rich Low_complexity Low_complexity 1 56 0 672 250 64 13 chr5 64556779 64557015 -135073135 + L1MC4 LINE L1 6460 6707 -1335 2162 219 102 37 chr5 64557039 64557815 -135072335 + L1MC4 LINE L1 6898 7723 -319 391 158 0 24 chr5 64557821 64557903 -135072247 + L1MC4 LINE L1 7963 8042 0 377 202 131 0 chr5 64557941 64558025 -135072125 + MER5B DNA MER1_type 84 178 0 760 297 37 4 chr5 64559033 64559279 -135070871 - MIR SINE MIR -1 261 8 415 281 65 73 chr5 64560216 64560476 -135069674 - MIR SINE MIR 0 262 5 305 282 134 0 chr5 64560846 64560988 -135069162 + MIR SINE MIR 86 246 -16 575 244 55 20 chr5 64561140 64561341 -135068809 + MER63A DNA MER1_type 3 210 0 297 0 0 0 chr5 64561375 64561408 -135068742 + (CA)n Simple_repeat Simple_repeat 2 34 0 5353 214 40 19 chr5 64562180 64564205 -135065945 + L1MB4 LINE L1 3813 5877 -303 15689 218 35 23 chr5 64564257 64568114 -135062036 + L1PA16 LINE L1 1097 5074 -1743 183 42 0 0 chr5 64568114 64568138 -135062012 + (CA)n Simple_repeat Simple_repeat 1 24 0 15689 218 35 23 chr5 64568138 64569901 -135060249 + L1PA16 LINE L1 5074 6814 -3 211 352 95 22 chr5 64569991 64570170 -135059980 - L2 LINE L2 -556 2758 2567 22 0 0 0 chr5 64571720 64571742 -135058408 + AT_rich Low_complexity Low_complexity 1 22 0 1389 139 4 38 chr5 64571969 64572206 -135057944 - AluJo SINE Alu -3 309 81 317 275 141 13 chr5 64573114 64573263 -135056887 - L2 LINE L2 0 3313 3146 24796 32 5 0 chr5 64573432 64577226 -135052924 - L1PA3 LINE L1 -5 6150 2343 2327 85 13 0 chr5 64577713 64578019 -135052131 - AluSx SINE Alu 0 312 3 2298 103 5 218 chr5 64578035 64578645 -135051505 + LTR12 LTR ERV1 1 480 -234 311 181 15 16 chr5 64579185 64579269 -135050881 - L1P4 LINE L1 -726 5442 5363 1541 278 77 51 chr5 64579304 64580930 -135049220 - L1MEc LINE L1 -3586 2629 992 771 187 72 19 chr5 64581675 64581702 -135048448 + L1MC3 LINE L1 7565 7589 -196 2016 130 3 22 chr5 64581702 64582017 -135048133 + AluSx SINE Alu 1 309 -3 771 187 72 19 chr5 64582017 64582198 -135047952 + L1MC3 LINE L1 7589 7784 -1 357 336 75 23 chr5 64582232 64582446 -135047704 - L1ME4a LINE L1 -202 5919 5695 297 200 11 84 chr5 64582448 64582500 -135047650 - L1ME4a LINE L1 -468 5653 5610 2274 58 0 0 chr5 64582500 64582778 -135047372 + AluY SINE Alu 34 311 0 297 200 11 84 chr5 64582778 64582820 -135047330 - L1ME4a LINE L1 -511 5610 5566 335 278 139 0 chr5 64583108 64583223 -135046927 - L2 LINE L2 -14 3258 3128 1788 252 65 61 chr5 64584480 64585099 -135045051 + MLT1E3 LTR MaLR 2 622 -2 5258 186 42 16 chr5 64585322 64586651 -135043499 - L1MC1 LINE L1 0 6333 4978 648 239 71 32 chr5 64587243 64587398 -135042752 + MIR SINE MIR 11 171 -91 687 231 42 45 chr5 64587416 64587504 -135042646 + L1 LINE L1 3059 3146 -3000 2218 96 0 0 chr5 64587504 64587796 -135042354 + AluY SINE Alu 4 295 -16 687 231 42 45 chr5 64587796 64588015 -135042135 + L1 LINE L1 3146 3365 -2781 252 265 142 39 chr5 64588265 64588785 -135041365 - L1MC1 LINE L1 -2660 3486 2913 342 298 23 46 chr5 64589297 64589428 -135040722 - HAL1 LINE L1 -1555 952 825 347 239 0 0 chr5 64589745 64589816 -135040334 - MER58 DNA MER1_type -2147 273 203 1585 134 47 119 chr5 64590969 64591373 -135038777 - THE1C LTR MaLR 0 375 1 301 271 21 37 chr5 64591395 64591520 -135038630 - MIR SINE MIR -45 163 41 253 284 57 0 chr5 64591862 64591950 -135038200 + L2 LINE L2 3221 3313 0 22 0 0 0 chr5 64592187 64592209 -135037941 + AT_rich Low_complexity Low_complexity 1 22 0 361 290 65 39 chr5 64592425 64592580 -135037570 - HAL1b LINE L1 -1106 242 84 369 322 154 39 chr5 64593820 64594152 -135035998 - L2 LINE L2 -817 2497 2128 1282 174 115 47 chr5 64594821 64595142 -135035008 + MER2 DNA MER2_type 1 343 -1 195 286 18 0 chr5 64595442 64595498 -135034652 + L2 LINE L2 3216 3272 0 1650 232 24 22 chr5 64595574 64595984 -135034166 - MER63C DNA MER1_type -1 929 519 798 194 88 0 chr5 64596001 64596171 -135033979 + MER58A DNA MER1_type 40 224 0 1894 181 86 62 chr5 64596171 64596684 -135033466 - MER63C DNA MER1_type -405 525 1 13834 24 0 0 chr5 64598125 64600513 -135029637 - L1PA4 LINE L1 -3 6152 3765 804 181 98 83 chr5 64602631 64602885 -135027265 + MLT2C2 LTR ERVL 207 464 0 216 226 57 0 chr5 64603077 64603130 -135027020 - MIR SINE MIR -118 144 89 783 173 19 62 chr5 64603610 64603772 -135026378 + MER8 DNA MER2_type 7 161 -78 1501 178 10 48 chr5 64603814 64604107 -135026043 - AluJo SINE Alu -30 282 1 526 174 0 11 chr5 64604109 64604201 -135025949 + MER8 DNA MER2_type 148 238 -1 465 251 104 33 chr5 64604344 64604527 -135025623 + MIR SINE MIR 67 262 0 * 537 243 77 43 chr5 64604500 64604735 -135025415 - MIR SINE MIR 0 262 20 188 312 0 65 chr5 64605345 64605422 -135024728 + MIR SINE MIR 118 189 -73 214 208 10 148 chr5 64605496 64605597 -135024553 - MIR3 SINE MIR -17 191 105 747 255 90 6 chr5 64607160 64607595 -135022555 + L1MCa LINE L1 1839 2355 -4071 441 269 9 0 chr5 64607906 64608014 -135022136 + L2 LINE L2 3187 3295 -18 193 89 44 0 chr5 64608244 64608289 -135021861 + A-rich Low_complexity Low_complexity 2 48 0 237 211 96 58 chr5 64608290 64608394 -135021756 - MIR SINE MIR -83 179 72 347 246 26 0 chr5 64608435 64608549 -135021601 + (TA)n Simple_repeat Simple_repeat 1 117 0 20281 169 34 10 chr5 64609224 64613180 -135016970 - L1 LINE L1 -3407 4158 95 258 32 0 0 chr5 64613180 64613211 -135016939 + (TG)n Simple_repeat Simple_repeat 2 32 0 20281 169 34 10 chr5 64613211 64613305 -135016845 - L1 LINE L1 -7470 95 5 7307 35 0 1 chr5 64613322 64614518 -135015632 + L1PA4 LINE L1 4962 6156 0 245 306 81 58 chr5 64615871 64616129 -135014021 + MLT1L LTR MaLR 342 605 -10 303 380 26 36 chr5 64616304 64616496 -135013654 - L2 LINE L2 -2043 1271 1082 307 294 43 53 chr5 64616641 64616828 -135013322 - LTR33 LTR ERVL -21 500 316 571 298 50 32 chr5 64616874 64617092 -135013058 - LTR33 LTR ERVL -297 224 3 204 246 33 0 chr5 64618368 64618429 -135011721 + GA-rich Low_complexity Low_complexity 2 64 0 2396 180 40 14 chr5 64618688 64619133 -135011017 - LTR32 LTR ERVL 0 471 15 1781 169 0 26 chr5 64619394 64619696 -135010454 - AluJb SINE Alu -18 294 1 21 82 0 0 chr5 64620352 64620401 -135009749 + AT_rich Low_complexity Low_complexity 1 49 0 233 57 29 0 chr5 64621007 64621042 -135009108 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 1863 171 139 5 chr5 64621043 64621418 -135008732 - MSTA LTR MaLR -1 427 3 233 95 0 24 chr5 64621419 64621461 -135008689 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 429 311 73 12 chr5 64621765 64621929 -135008221 - MIR3 SINE MIR -11 197 24 409 313 39 11 chr5 64622229 64622411 -135007739 + MER5A DNA MER1_type 1 187 -2 279 0 0 0 chr5 64622918 64622949 -135007201 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2175 64 4 0 chr5 64622958 64623223 -135006927 - AluY SINE Alu -45 266 1 24 0 0 0 chr5 64623230 64623254 -135006896 + AT_rich Low_complexity Low_complexity 1 24 0 3274 158 15 3 chr5 64623284 64623868 -135006282 + LTR10C LTR ERV1 1 591 0 251 323 68 37 chr5 64624049 64624210 -135005940 - MER5A DNA MER1_type -1 188 23 824 41 0 0 chr5 64624910 64625007 -135005143 - AluY SINE Alu -7 304 208 2028 174 28 37 chr5 64625069 64625202 -135004948 - MER95 LTR ERV -4 427 294 2575 27 0 0 chr5 64625202 64625501 -135004649 + L1PA3 LINE L1 5854 6152 -3 2028 174 28 37 chr5 64625501 64625798 -135004352 - MER95 LTR ERV -137 294 1 22 0 0 0 chr5 64626275 64626297 -135003853 + AT_rich Low_complexity Low_complexity 1 22 0 314 246 143 0 chr5 64626738 64626864 -135003286 + L1ME4a LINE L1 5975 6118 -3 1501 223 30 25 chr5 64628425 64628788 -135001362 - MLT1A1 LTR MaLR 0 365 1 192 306 31 41 chr5 64629259 64629357 -135000793 - L2 LINE L2 -501 2813 2717 404 292 29 58 chr5 64629409 64629580 -135000570 - MIR SINE MIR -48 214 49 1424 277 74 27 chr5 64630791 64631530 -134998620 - HAL1b LINE L1 -144 1204 431 1492 346 77 9 chr5 64631638 64632199 -134997951 + MER115 DNA AcHobo 1 599 -94 225 154 0 0 chr5 64632199 64632238 -134997912 + (CA)n Simple_repeat Simple_repeat 2 40 0 1462 128 0 0 chr5 64632319 64632537 -134997613 - HSMAR2 DNA Mariner -1 1301 1084 5346 44 8 1 chr5 64632537 64633200 -134996950 + L1PA8 LINE L1 5451 6117 -55 6492 141 27 5 chr5 64633217 64634262 -134995888 - HSMAR2 DNA Mariner -232 1070 3 439 261 128 29 chr5 64634310 64634616 -134995534 - HAL1b LINE L1 -786 562 227 23 33 0 0 chr5 64634616 64634646 -134995504 + AT_rich Low_complexity Low_complexity 1 30 0 35 0 0 0 chr5 64634786 64634821 -134995329 + AT_rich Low_complexity Low_complexity 1 35 0 2044 264 41 50 chr5 64635660 64636593 -134993557 - L1MEc LINE L1 -5082 1314 391 341 156 31 0 chr5 64636655 64636719 -134993431 - L1MEc LINE L1 -6299 97 32 280 111 37 0 chr5 64637061 64637115 -134993035 + (TA)n Simple_repeat Simple_repeat 2 57 0 246 289 0 0 chr5 64637115 64637205 -134992945 + L1MC4 LINE L1 6614 6703 -1339 234 156 0 0 chr5 64637206 64637251 -134992899 + (TA)n Simple_repeat Simple_repeat 2 46 0 485 156 10 0 chr5 64637353 64637449 -134992701 + (TA)n Simple_repeat Simple_repeat 1 97 0 261 0 0 0 chr5 64638435 64638464 -134991686 + (CA)n Simple_repeat Simple_repeat 2 30 0 266 331 133 30 chr5 64638651 64638817 -134991333 - MIR3 SINE MIR -7 201 19 387 0 0 0 chr5 64639227 64639270 -134990880 + (TG)n Simple_repeat Simple_repeat 1 43 0 1298 206 94 37 chr5 64639468 64639842 -134990308 + MLT2D LTR ERVL 10 404 -10 273 212 97 30 chr5 64640033 64640198 -134989952 + HAL1 LINE L1 1014 1189 -1318 288 297 0 0 chr5 64640439 64640503 -134989647 + L2 LINE L2 3191 3254 -18 260 267 75 42 chr5 64640511 64640631 -134989519 + MIR SINE MIR 126 249 -13 354 45 0 0 chr5 64642046 64642090 -134988060 + (CA)n Simple_repeat Simple_repeat 2 45 0 230 274 16 0 chr5 64642483 64642545 -134987605 + MER46C DNA MER2_type 255 317 -21 2792 7 0 10 chr5 64642641 64642951 -134987199 - AluYb8 SINE Alu -11 307 1 815 229 60 14 chr5 64643188 64643406 -134986744 - MLT1A2 LTR MaLR -2 372 145 1211 228 77 25 chr5 64643190 64643554 -134986596 - MLT1B LTR MaLR -4 386 4 3538 100 18 0 chr5 64643620 64644131 -134986019 - L1PA13 LINE L1 -5 6158 5639 220 286 0 32 chr5 64644528 64644591 -134985559 + GA-rich Low_complexity Low_complexity 6 66 0 1861 217 140 2 chr5 64644779 64645236 -134984914 + MLT1F1 LTR MaLR 10 529 -38 1926 184 22 6 chr5 64645316 64645675 -134984475 - MLT1A1 LTR MaLR 0 365 1 1502 170 91 28 chr5 64647120 64647473 -134982677 - THE1C LTR MaLR 0 375 1 180 184 0 0 chr5 64647475 64647524 -134982626 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 311 295 0 49 chr5 64648030 64648152 -134981998 - MIR SINE MIR 0 262 147 21 36 0 0 chr5 64648806 64648834 -134981316 + AT_rich Low_complexity Low_complexity 1 28 0 204 203 31 16 chr5 64649514 64649578 -134980572 + GA-rich Low_complexity Low_complexity 1 65 0 2290 112 14 20 chr5 64649697 64650054 -134980096 + THE1A LTR MaLR 1 355 0 11323 102 13 3 chr5 64650054 64651618 -134978532 + THE1A-int LTR MaLR 1 1580 0 2136 124 14 11 chr5 64651618 64651972 -134978178 + THE1A LTR MaLR 1 355 0 247 299 30 0 chr5 64652142 64652209 -134977941 - tRNA-Arg-CGC tRNA tRNA -7 69 1 1870 151 7 40 chr5 64652245 64652549 -134977601 - AluSx SINE Alu -18 294 1 1912 133 60 43 chr5 64652904 64652945 -134977205 - THE1C LTR MaLR 0 375 336 2117 128 13 0 chr5 64652945 64653250 -134976900 + AluSx SINE Alu 1 309 -3 1912 133 60 43 chr5 64653250 64653577 -134976573 - THE1C LTR MaLR -39 336 1 21 0 0 0 chr5 64656029 64656050 -134974100 + AT_rich Low_complexity Low_complexity 1 21 0 351 191 145 53 chr5 64656365 64656496 -134973654 + L2 LINE L2 3158 3300 -13 615 250 0 0 chr5 64656518 64656638 -134973512 - LTR67 LTR ERVL -336 221 102 508 269 46 0 chr5 64656747 64656877 -134973273 - MER3 DNA MER1_type -73 136 1 397 334 10 2 chr5 64656879 64657022 -134973128 - MIR3 SINE MIR -50 158 12 245 234 0 0 chr5 64657179 64657226 -134972924 - MIR SINE MIR -131 77 31 1739 181 0 0 chr5 64658102 64658379 -134971771 + AluSx SINE Alu 1 277 -35 720 247 211 19 chr5 64658434 64658742 -134971408 - L2 LINE L2 -5 3308 2942 1799 130 88 34 chr5 64659453 64659807 -134970343 - THE1C LTR MaLR 0 375 3 9440 130 42 18 chr5 64659809 64661352 -134968798 - THE1C-int LTR MaLR 0 1580 1 1682 154 93 20 chr5 64661362 64661706 -134968444 - THE1C LTR MaLR -6 369 1 866 293 156 40 chr5 64661877 64662494 -134967656 + L2 LINE L2 2533 3236 -77 297 0 0 0 chr5 64662511 64662544 -134967606 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 189 180 0 0 chr5 64662641 64662691 -134967459 + (ATG)n Simple_repeat Simple_repeat 1 50 0 579 338 89 0 chr5 64662691 64662916 -134967234 - MIR SINE MIR -1 261 17 22 0 0 0 chr5 64663479 64663501 -134966649 + AT_rich Low_complexity Low_complexity 1 22 0 219 219 0 0 chr5 64664085 64664126 -134966024 + GA-rich Low_complexity Low_complexity 3 43 0 215 238 24 83 chr5 64664160 64664217 -134965933 + MIR SINE MIR 76 128 -134 2327 119 3 57 chr5 64664217 64664602 -134965548 + THE1B LTR MaLR 1 364 0 215 238 24 83 chr5 64664602 64664628 -134965522 + MIR SINE MIR 128 154 -108 472 301 112 15 chr5 64664686 64664836 -134965314 + MIR SINE MIR 34 211 -51 1596 163 60 41 chr5 64664836 64665204 -134964946 + THE1C LTR MaLR 1 375 0 472 301 112 15 chr5 64665204 64665259 -134964891 + MIR SINE MIR 211 259 -3 1640 238 34 27 chr5 64665317 64665758 -134964392 - MLT1D LTR MaLR -60 445 2 1410 218 165 8 chr5 64666540 64666935 -134963215 + LTR48 LTR ERV1 1 457 -330 336 179 36 48 chr5 64666934 64667018 -134963132 + LTR48 LTR ERV1 568 650 -137 * 214 286 0 0 chr5 64667064 64667113 -134963037 - L2 LINE L2 -11 3261 3213 922 114 23 11 chr5 64667184 64667359 -134962791 + GA-rich Low_complexity Low_complexity 4 180 0 198 171 0 0 chr5 64667623 64667664 -134962486 + (CA)n Simple_repeat Simple_repeat 1 41 0 361 361 24 12 chr5 64667685 64667851 -134962299 + MIR3 SINE MIR 2 169 -39 226 171 24 73 chr5 64668289 64668371 -134961779 - MER69 DNA AcHobo -224 2302 2225 243 0 0 0 chr5 64669148 64669175 -134960975 + (A)n Simple_repeat Simple_repeat 1 27 0 2202 154 80 20 chr5 64669521 64669923 -134960227 - MSTC LTR MaLR 0 428 3 198 325 114 40 chr5 64670360 64670711 -134959439 + L2 LINE L2 1762 2138 -1176 225 254 164 49 chr5 64670986 64671108 -134959042 + L2 LINE L2 3137 3272 0 21 36 0 0 chr5 64671127 64671155 -134958995 + AT_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr5 64671160 64671188 -134958962 + AT_rich Low_complexity Low_complexity 1 28 0 183 299 278 0 chr5 64671203 64671300 -134958850 - MIR3 SINE MIR -48 160 37 373 270 251 6 chr5 64671451 64671614 -134958536 - MIR SINE MIR -15 247 45 192 326 53 21 chr5 64672863 64672958 -134957192 + MIR SINE MIR 2 99 -163 221 329 64 21 chr5 64673962 64674102 -134956048 - L3 LINE CR1 -156 1421 1276 390 353 44 25 chr5 64674116 64674320 -134955830 + MLT1K LTR MaLR 33 240 -348 474 256 113 52 chr5 64674390 64674620 -134955530 + MLT1K LTR MaLR 339 582 -6 196 349 8 40 chr5 64674625 64674751 -134955399 - L3 LINE CR1 -300 1277 1156 29 0 0 0 chr5 64674787 64674816 -134955334 + AT_rich Low_complexity Low_complexity 1 29 0 1759 134 0 33 chr5 64674991 64675297 -134954853 - L1PA13 LINE L1 0 6163 5868 695 304 69 3 chr5 64675611 64675847 -134954303 - MIR SINE MIR -12 250 3 1379 93 53 40 chr5 64677177 64677402 -134952748 - MER30 DNA MER1_type 0 230 3 256 250 0 0 chr5 64678067 64678119 -134952031 + L2 LINE L2 3213 3264 -8 1822 147 155 19 chr5 64679867 64680242 -134949908 + MSTA LTR MaLR 3 428 0 9108 146 15 36 chr5 64680244 64681856 -134948294 + MSTA-int LTR MaLR 3 1580 0 2060 139 131 13 chr5 64681858 64682239 -134947911 + MSTA LTR MaLR 3 428 0 42 57 0 0 chr5 64682645 64682715 -134947435 + AT_rich Low_complexity Low_complexity 1 70 0 336 284 0 39 chr5 64683455 64683582 -134946568 - LTR67 LTR ERVL -5 552 431 2166 125 3 0 chr5 64684178 64684483 -134945667 + AluSx SINE Alu 1 306 -6 205 244 0 0 chr5 64684500 64684541 -134945609 + GA-rich Low_complexity Low_complexity 2 42 0 1961 128 6 32 chr5 64684702 64685015 -134945135 + AluJb SINE Alu 5 309 -3 22 35 0 0 chr5 64685657 64685686 -134944464 + AT_rich Low_complexity Low_complexity 1 29 0 911 73 81 0 chr5 64685728 64685852 -134944298 + MER85 DNA T2_type 1 134 -5 787 174 67 46 chr5 64687254 64687449 -134942701 + MER3 DNA MER1_type 5 203 -6 195 375 62 0 chr5 64687457 64687521 -134942629 - L2 LINE L2 -54 3218 3151 202 150 17 33 chr5 64687754 64687814 -134942336 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 21 0 0 0 chr5 64687827 64687848 -134942302 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 64687879 64687914 -134942236 + AT_rich Low_complexity Low_complexity 1 35 0 261 330 147 59 chr5 64688705 64688774 -134941376 - L2 LINE L2 -27 3286 3224 1404 209 65 7 chr5 64688774 64689052 -134941098 + AluJb SINE Alu 1 294 -18 351 0 0 0 chr5 64689052 64689091 -134941059 + (CA)n Simple_repeat Simple_repeat 2 40 0 261 330 147 59 chr5 64689091 64689429 -134940721 - L2 LINE L2 -88 3225 2842 535 14 28 0 chr5 64689515 64689587 -134940563 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 243 245 102 34 chr5 64689824 64689971 -134940179 + L1MC/D LINE L1 5309 5465 -2343 219 161 0 0 chr5 64689972 64690028 -134940122 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 29 47 0 0 chr5 64690451 64690494 -134939656 + AT_rich Low_complexity Low_complexity 1 43 0 2174 122 0 12 chr5 64690682 64691002 -134939148 - MER1A DNA MER1_type 0 529 214 414 219 0 76 chr5 64691010 64691115 -134939035 - MER1A DNA MER1_type -426 101 5 1739 132 96 33 chr5 64691226 64691560 -134938590 - THE1C LTR MaLR -20 355 1 271 343 129 45 chr5 64691860 64692262 -134937888 + L2 LINE L2 2538 2973 -341 354 279 127 25 chr5 64692378 64692536 -134937614 + MLT1I LTR MaLR 28 201 -208 22 56 0 0 chr5 64692594 64692630 -134937520 + AT_rich Low_complexity Low_complexity 1 36 0 1612 130 15 0 chr5 64693102 64693364 -134936786 - L1M2 LINE L1 -706 5606 5341 212 270 220 10 chr5 64693419 64693519 -134936631 - L2 LINE L2 -2 3270 3150 234 400 19 25 chr5 64693618 64693778 -134936372 - L2 LINE L2 -188 3084 2926 191 330 68 0 chr5 64693860 64693948 -134936202 - L2 LINE L2 -635 2679 2586 2507 119 19 5 chr5 64694297 64694667 -134935483 + THE1C LTR MaLR 1 375 0 27 62 0 0 chr5 64694994 64695042 -134935108 + AT_rich Low_complexity Low_complexity 1 48 0 280 297 90 9 chr5 64695077 64695188 -134934962 + L2 LINE L2 2769 2888 -426 22 70 0 0 chr5 64695577 64695620 -134934530 + AT_rich Low_complexity Low_complexity 1 43 0 331 403 89 30 chr5 64696060 64696430 -134933720 + L2 LINE L2 2877 3268 -4 272 287 53 43 chr5 64696756 64696850 -134933300 - MIR3 SINE MIR -106 102 8 370 160 0 193 chr5 64696960 64697079 -134933071 - Tigger7 DNA MER2_type -3 2584 2489 * 971 194 44 48 chr5 64697077 64697283 -134932867 - Tigger7 DNA MER2_type -466 267 63 230 200 44 0 chr5 64697433 64697478 -134932672 - Tigger7 DNA MER2_type -291 48 2 441 333 39 10 chr5 64698038 64698245 -134931905 + MIR SINE MIR 49 261 -1 367 314 176 6 chr5 64698580 64698739 -134931411 + MIR SINE MIR 72 257 -5 1895 210 32 37 chr5 64699683 64699953 -134930197 - MER82 DNA MER2_type -1 652 382 192 40 0 0 chr5 64699953 64699978 -134930172 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1895 210 32 37 chr5 64699978 64700064 -134930086 - MER82 DNA MER2_type -271 382 296 2505 171 31 5 chr5 64700064 64700509 -134929641 + MSTB2 LTR MaLR 1 457 0 1895 210 32 37 chr5 64700509 64700585 -134929565 - MER82 DNA MER2_type -357 296 221 487 141 0 0 chr5 64700586 64700657 -134929493 - AluJ/FRAM SINE Alu -18 294 224 264 221 70 58 chr5 64700710 64700796 -134929354 + L2 LINE L2 3225 3311 -2 21 71 0 0 chr5 64701970 64702012 -134928138 + AT_rich Low_complexity Low_complexity 1 42 0 870 224 40 5 chr5 64702426 64702627 -134927523 + MER3 DNA MER1_type 2 209 0 614 313 17 6 chr5 64703559 64703738 -134926412 + MER5A DNA MER1_type 3 183 -6 1897 215 42 7 chr5 64704347 64704757 -134925393 - MSTB LTR MaLR -2 424 1 2170 114 0 7 chr5 64704821 64705119 -134925031 + AluSq SINE Alu 3 298 -15 259 381 101 16 chr5 64705157 64705404 -134924746 + L3 LINE CR1 1024 1291 -286 623 137 8 185 chr5 64705404 64705597 -134924553 - MER3 DNA MER1_type -57 152 4 375 279 0 36 chr5 64705606 64705717 -134924433 + L3 LINE CR1 1312 1418 -159 13118 151 46 5 chr5 64706656 64708976 -134921174 + Tigger1 DNA MER2_type 2 2417 -1 231 343 30 47 chr5 64709085 64709254 -134920896 + L1MEd LINE L1 373 538 -5581 1064 297 136 7 chr5 64709339 64709774 -134920376 - LTR16C LTR ERVL 0 491 1 748 300 105 42 chr5 64709776 64710403 -134919747 + L1MEd LINE L1 586 1252 -4867 1507 294 180 6 chr5 64710421 64711078 -134919072 + L2 LINE L2 1866 2636 -678 433 260 55 31 chr5 64711108 64711235 -134918915 + MLT1H LTR MaLR 45 174 -375 250 292 14 0 chr5 64711515 64711587 -134918563 + L2 LINE L2 2620 2692 -622 21 36 0 0 chr5 64712444 64712472 -134917678 + AT_rich Low_complexity Low_complexity 1 28 0 2523 58 0 0 chr5 64712490 64712801 -134917349 - AluY SINE Alu 0 311 1 7009 52 7 3 chr5 64713276 64714461 -134915689 + L1PA5 LINE L1 4964 6152 -2 308 322 27 48 chr5 64714472 64714618 -134915532 + MER5A DNA MER1_type 17 159 -30 192 184 0 0 chr5 64716114 64716163 -134913987 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 279 194 60 0 chr5 64717073 64717140 -134913010 + LTR41 LTR ERVL 693 763 -10 31 26 0 0 chr5 64717314 64717352 -134912798 + AT_rich Low_complexity Low_complexity 1 38 0 2013 140 59 8 chr5 64718082 64718439 -134911711 + THE1C LTR MaLR 1 375 0 450 341 75 13 chr5 64719351 64719577 -134910573 + MIR SINE MIR 20 259 -3 225 0 0 0 chr5 64720266 64720291 -134909859 + (A)n Simple_repeat Simple_repeat 1 25 0 1701 197 0 0 chr5 64721477 64721772 -134908378 + AluJb SINE Alu 1 295 -17 6227 74 9 0 chr5 64723049 64724002 -134906148 - L1PA8A LINE L1 0 6131 5170 24 32 0 0 chr5 64724085 64724116 -134906034 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr5 64724154 64724186 -134905964 + AT_rich Low_complexity Low_complexity 1 32 0 26 30 0 0 chr5 64724602 64724635 -134905515 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 64724659 64724689 -134905461 + AT_rich Low_complexity Low_complexity 1 30 0 1133 221 10 19 chr5 64725470 64725835 -134904315 - L1M4 LINE L1 -693 5989 5624 5779 239 48 32 chr5 64725928 64727928 -134902222 - L1M4 LINE L1 -4606 2040 16 29 28 0 0 chr5 64727947 64727983 -134902167 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 64728382 64728406 -134901744 + AT_rich Low_complexity Low_complexity 1 24 0 437 316 144 0 chr5 64728488 64728662 -134901488 - MIR SINE MIR -1 261 63 13876 149 23 13 chr5 64729245 64731623 -134898527 - Tigger1 DNA MER2_type 0 2418 16 939 240 158 24 chr5 64732118 64732568 -134897582 + MER113 DNA MER1_type? 2 511 -10 222 311 8 82 chr5 64732823 64732945 -134897205 - MIR SINE MIR -59 203 91 828 225 145 36 chr5 64733340 64733501 -134896649 - AluJo SINE Alu 0 311 169 216 0 0 0 chr5 64733501 64733525 -134896625 + (TA)n Simple_repeat Simple_repeat 2 25 0 828 225 145 36 chr5 64733525 64733641 -134896509 - AluJo SINE Alu -142 169 7 820 204 29 9 chr5 64734182 64734509 -134895641 + MSTD LTR MaLR 1 396 0 248 371 40 32 chr5 64735210 64735334 -134894816 - L2 LINE L2 -9 3263 3139 269 320 115 0 chr5 64735687 64735809 -134894341 - L2 LINE L2 0 3313 3178 203 360 26 33 chr5 64735787 64735940 -134894210 - L2 LINE L2 -211 3061 2910 * 198 0 0 0 chr5 64736154 64736176 -134893974 + (CAAG)n Simple_repeat Simple_repeat 3 24 0 581 331 33 45 chr5 64736396 64736953 -134893197 - L2 LINE L2 0 3313 2536 262 320 28 55 chr5 64737144 64737325 -134892825 - L2 LINE L2 -477 2837 2662 21 71 0 0 chr5 64738724 64738766 -134891384 + AT_rich Low_complexity Low_complexity 1 42 0 22 111 0 0 chr5 64739099 64739198 -134890952 + AT_rich Low_complexity Low_complexity 1 99 0 181 322 195 17 chr5 64740376 64740494 -134889656 - L2 LINE L2 0 3272 3134 242 222 74 0 chr5 64740673 64740727 -134889423 - Charlie8 DNA MER1_type -989 1428 1371 * 291 298 158 0 chr5 64740722 64740836 -134889314 - Charlie8 DNA MER1_type -2171 246 115 1558 189 55 23 chr5 64740877 64741220 -134888930 - MLT1A1 LTR MaLR -11 354 1 222 225 0 0 chr5 64742314 64742354 -134887796 + A-rich Low_complexity Low_complexity 4 43 0 231 250 98 18 chr5 64742579 64742691 -134887459 + L1ME LINE L1 5543 5663 -458 238 241 72 12 chr5 64742693 64742776 -134887374 + L1ME LINE L1 5709 5796 -325 284 213 33 34 chr5 64742914 64743003 -134887147 - L1MC4 LINE L1 -1347 6975 1995 231 281 34 0 chr5 64742929 64743018 -134887132 + L1MC4 LINE L1 6614 6705 -1337 * 557 254 16 0 chr5 64743840 64743962 -134886188 - MER94 DNA DNA -5 129 6 767 227 30 120 chr5 64743962 64744328 -134885822 + L1MC4 LINE L1 7710 8042 0 2148 127 3 10 chr5 64745542 64745856 -134884294 + AluSx SINE Alu 1 312 0 2321 43 0 0 chr5 64745867 64746146 -134884004 + L1PA5 LINE L1 5864 6142 -12 408 20 0 0 chr5 64746146 64746195 -134883955 + (TA)n Simple_repeat Simple_repeat 2 50 0 866 109 0 58 chr5 64746289 64746326 -134883824 - L1MA7 LINE L1 0 6291 6253 2311 90 0 13 chr5 64746326 64746625 -134883525 + AluSc SINE Alu 1 295 -14 866 109 0 58 chr5 64746625 64746761 -134883389 - L1MA7 LINE L1 -38 6253 6128 26 0 0 0 chr5 64746823 64746849 -134883301 + AT_rich Low_complexity Low_complexity 1 26 0 13946 145 18 11 chr5 64746861 64749257 -134880893 - Tigger1 DNA MER2_type -1 2417 4 239 146 0 0 chr5 64749258 64749299 -134880851 - Tigger1 DNA MER2_type -2377 41 1 1183 309 67 29 chr5 64749820 64750038 -134880112 + L2 LINE L2 2610 2818 -495 2062 140 0 3 chr5 64750038 64750338 -134879812 - AluSx SINE Alu -11 301 3 1183 309 67 29 chr5 64750338 64750804 -134879346 + L2 LINE L2 2818 3313 0 924 220 12 0 chr5 64750829 64751002 -134879148 + MER5A DNA MER1_type 15 189 0 2550 215 32 66 chr5 64751257 64751909 -134878241 - MER21B LTR ERV1 -233 630 1 1117 180 57 0 chr5 64751910 64752138 -134878012 - MER67C LTR ERV1 -469 241 1 189 107 0 0 chr5 64752311 64752339 -134877811 + (ATG)n Simple_repeat Simple_repeat 3 30 0 441 223 168 65 chr5 64752348 64752573 -134877577 - MIR SINE MIR -15 247 16 4870 41 5 0 chr5 64752697 64753280 -134876870 + LTR10C LTR ERV1 1 586 -5 241 303 32 67 chr5 64754401 64754555 -134875595 - MIR SINE MIR -32 176 17 2147 123 18 6 chr5 64754580 64754913 -134875237 + MER1B DNA MER1_type 1 337 0 1218 79 0 36 chr5 64755197 64755393 -134874757 - AluSc SINE Alu 0 310 121 544 217 76 13 chr5 64755934 64756091 -134874059 - MER53 DNA DNA -16 173 7 235 362 85 7 chr5 64756307 64756448 -134873702 + MIR3 SINE MIR 45 196 -12 1102 245 135 0 chr5 64756706 64756988 -134873162 - MER67D LTR ERV1 -4 510 191 326 121 0 17 chr5 64756988 64757046 -134873104 + (TA)n Simple_repeat Simple_repeat 1 57 0 334 259 199 52 chr5 64757074 64757480 -134872670 + L1M4 LINE L1 2678 3143 -3003 284 184 184 56 chr5 64757645 64757770 -134872380 - MIR SINE MIR -6 256 116 229 167 77 64 chr5 64758089 64758167 -134871983 + L1M4 LINE L1 4672 4750 -1396 1464 181 117 22 chr5 64758172 64758531 -134871619 + LTR52 LTR ERVL 1 393 -28 2189 57 0 7 chr5 64758589 64758870 -134871280 - L1PA8 LINE L1 0 6172 5894 195 167 0 0 chr5 64759227 64759269 -134870881 + GA-rich Low_complexity Low_complexity 1 42 0 27 92 0 0 chr5 64759414 64759490 -134870660 + AT_rich Low_complexity Low_complexity 1 76 0 313 202 70 26 chr5 64761402 64761516 -134868634 - MER113 DNA MER1_type? -384 137 19 2100 163 60 35 chr5 64761628 64762147 -134868003 + MLT2A2 LTR ERVL 1 554 0 380 305 102 25 chr5 64762175 64762372 -134867778 + MIR SINE MIR 32 243 -19 9090 243 64 27 chr5 64762542 64765551 -134864599 + L1ME1 LINE L1 19 2915 -3625 2183 112 7 0 chr5 64765551 64765846 -134864304 + AluSp SINE Alu 1 297 -16 9090 243 64 27 chr5 64765846 64767669 -134862481 + L1ME1 LINE L1 2915 5084 -1456 1639 161 0 0 chr5 64767669 64767911 -134862239 - AluSx SINE Alu -31 281 40 9090 243 64 27 chr5 64767911 64768046 -134862104 + L1ME1 LINE L1 5084 5213 -1327 2108 230 71 33 chr5 64768042 64768678 -134861472 + L1ME1 LINE L1 5896 6555 -5 * 523 239 0 99 chr5 64768701 64768843 -134861307 + MER5B DNA MER1_type 50 177 -1 26 0 0 0 chr5 64769290 64769316 -134860834 + AT_rich Low_complexity Low_complexity 1 26 0 813 250 5 0 chr5 64771203 64771391 -134858759 + MER5A DNA MER1_type 1 189 0 29 0 0 0 chr5 64773800 64773829 -134856321 + AT_rich Low_complexity Low_complexity 1 29 0 229 171 0 0 chr5 64774444 64774485 -134855665 + L2 LINE L2 3262 3302 -11 220 379 105 0 chr5 64775224 64775348 -134854802 - L2 LINE L2 0 3272 3136 721 246 152 0 chr5 64775348 64775539 -134854611 + MER58A DNA MER1_type 1 220 -4 618 246 71 79 chr5 64775737 64775989 -134854161 + MIR SINE MIR 10 259 -3 1005 304 102 53 chr5 64776030 64776656 -134853494 - L2 LINE L2 -376 2938 2282 727 331 36 31 chr5 64776657 64776752 -134853398 - MLT1I LTR MaLR -49 360 267 1429 221 46 30 chr5 64776752 64777119 -134853031 - MLT1A2 LTR MaLR -1 373 1 727 331 36 31 chr5 64777119 64777379 -134852771 - MLT1I LTR MaLR -142 267 3 2236 175 59 18 chr5 64777482 64777921 -134852229 + LTR32 LTR ERVL 15 471 0 256 175 35 0 chr5 64778159 64778216 -134851934 - L1ME LINE L1 -302 5819 5761 4848 146 28 5 chr5 64778299 64779096 -134851054 - L1PA15 LINE L1 -5 6160 5346 21 0 0 0 chr5 64779388 64779409 -134850741 + AT_rich Low_complexity Low_complexity 1 21 0 185 353 0 0 chr5 64779683 64779734 -134850416 + L2 LINE L2 3210 3260 -12 255 274 42 11 chr5 64779835 64779930 -134850220 - L3 LINE CR1 -1 1576 1479 2247 124 39 17 chr5 64782024 64782380 -134847770 + THE1B LTR MaLR 1 364 0 731 278 64 79 chr5 64782456 64782923 -134847227 + LTR16B LTR ERVL 4 463 -1 1534 217 30 19 chr5 64783650 64784018 -134846132 - L1ME1 LINE L1 -176 5990 5619 482 294 76 25 chr5 64784127 64784402 -134845748 - HAL1 LINE L1 -813 1694 1406 379 233 57 99 chr5 64784430 64784744 -134845406 - L1MEd LINE L1 -5005 1114 814 705 381 52 22 chr5 64787106 64787738 -134842412 - L2 LINE L2 -345 2969 2319 452 346 10 34 chr5 64788502 64788707 -134841443 - MIR3 SINE MIR 0 208 9 957 215 43 0 chr5 64788973 64789182 -134840968 + MER20 DNA MER1_type 2 219 0 1691 160 0 72 chr5 64789223 64789555 -134840595 + AluJo SINE Alu 2 309 -3 444 319 7 7 chr5 64789862 64790003 -134840147 + MIR SINE MIR 110 250 -12 261 292 69 0 chr5 64790019 64790091 -134840059 - MIR3 SINE MIR -21 187 111 2501 108 6 0 chr5 64790226 64790579 -134839571 + THE1A LTR MaLR 1 355 0 22 80 0 0 chr5 64792316 64792366 -134837784 + AT_rich Low_complexity Low_complexity 1 50 0 32 0 0 0 chr5 64792958 64792990 -134837160 + AT_rich Low_complexity Low_complexity 1 32 0 225 0 0 0 chr5 64793020 64793045 -134837105 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 215 77 0 26 chr5 64793578 64793617 -134836533 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 21 0 0 0 chr5 64794621 64794642 -134835508 + AT_rich Low_complexity Low_complexity 1 21 0 493 297 111 57 chr5 64794813 64794985 -134835165 - LTR33 LTR ERVL -63 458 297 2095 116 0 35 chr5 64794985 64795295 -134834855 + AluSg SINE Alu 1 299 -11 493 297 111 57 chr5 64795295 64795404 -134834746 - LTR33 LTR ERVL -224 297 195 3776 63 20 2 chr5 64795404 64795908 -134834242 - LTR10D LTR ERV1 0 513 1 493 297 111 57 chr5 64795908 64796029 -134834121 - LTR33 LTR ERVL -326 195 33 1369 143 0 14 chr5 64796434 64796650 -134833500 - AluJb SINE Alu -15 297 85 330 67 0 0 chr5 64797980 64798025 -134832125 + (CA)n Simple_repeat Simple_repeat 1 45 0 242 287 59 20 chr5 64798264 64798365 -134831785 - L2 LINE L2 -4 3309 3205 542 264 27 26 chr5 64799043 64799247 -134830903 + L1ME4a LINE L1 5539 5743 -378 354 192 290 9 chr5 64799276 64799490 -134830660 + L1ME4a LINE L1 5815 6088 -33 246 116 0 0 chr5 64799496 64799539 -134830611 + (CA)n Simple_repeat Simple_repeat 2 44 0 607 297 66 29 chr5 64800094 64800475 -134829675 + L1ME1 LINE L1 25 419 -6004 2162 104 0 0 chr5 64800480 64800758 -134829392 + AluSg SINE Alu 19 296 -14 4249 265 59 37 chr5 64800828 64801318 -134828832 + L1ME1 LINE L1 992 1470 -5471 996 166 101 0 chr5 64801318 64801517 -134828633 - MER20 DNA MER1_type 0 219 1 4249 265 59 37 chr5 64801517 64804548 -134825602 + L1ME1 LINE L1 1470 4739 -2202 1608 267 12 20 chr5 64804549 64805044 -134825106 + L1ME1 LINE L1 6176 6666 -295 425 123 46 0 chr5 64805044 64805109 -134825041 + LTR1 LTR ERV1 718 785 0 1992 213 43 6 chr5 64805109 64805582 -134824568 + L1MC4a LINE L1 7311 8038 -4 8482 113 10 26 chr5 64805593 64806819 -134823331 + HSMAR1 DNA Mariner 3 1247 -40 1944 124 3 11 chr5 64806819 64807101 -134823049 + AluSx SINE Alu 3 282 -30 217 0 0 57 chr5 64807106 64807141 -134823009 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 8482 113 10 26 chr5 64807141 64807214 -134822936 + HSMAR1 DNA Mariner 1251 1287 0 3955 24 0 0 chr5 64807746 64808206 -134821944 - L1PA2 LINE L1 -1750 4396 3937 8371 30 0 0 chr5 64808206 64809971 -134820179 + L1PA2 LINE L1 4391 6155 0 192 77 0 0 chr5 64810003 64810029 -134820121 + (A)n Simple_repeat Simple_repeat 1 26 0 506 315 32 44 chr5 64810209 64810641 -134819509 - L1ME4a LINE L1 -213 5908 5482 582 41 0 0 chr5 64811487 64811560 -134818590 + (TG)n Simple_repeat Simple_repeat 2 74 0 456 263 19 17 chr5 64812066 64812198 -134817952 + MER5B DNA MER1_type 56 178 0 189 310 76 2 chr5 64813493 64813567 -134816583 + MIR SINE MIR 64 141 -67 752 184 65 74 chr5 64813805 64814022 -134816128 - MER20 DNA MER1_type -1 218 4 2569 113 11 5 chr5 64814930 64815303 -134814847 + THE1C LTR MaLR 1 375 0 3200 251 31 11 chr5 64815517 64816505 -134813645 + L1M4 LINE L1 3883 4890 -1256 1901 196 8 3 chr5 64817044 64817407 -134812743 + MLT1A1 LTR MaLR 1 365 0 21 57 0 0 chr5 64818957 64818992 -134811158 + AT_rich Low_complexity Low_complexity 1 35 0 758 167 72 44 chr5 64819311 64819491 -134810659 - AluJo SINE Alu -7 305 121 25 51 0 0 chr5 64820217 64820256 -134809894 + AT_rich Low_complexity Low_complexity 1 39 0 212 287 15 0 chr5 64824712 64824853 -134805297 + CT-rich Low_complexity Low_complexity 1 143 0 432 53 0 0 chr5 64825322 64825379 -134804771 + Alu SINE Alu 236 292 -20 273 216 255 0 chr5 64828725 64828827 -134801323 + MIR SINE MIR 74 201 -61 29 84 0 0 chr5 64829834 64829905 -134800245 + AT_rich Low_complexity Low_complexity 1 71 0 370 270 112 60 chr5 64830044 64830277 -134799873 - L1ME3A LINE L1 -248 5922 5678 454 274 158 27 chr5 64830306 64830452 -134799698 - MER5A DNA MER1_type -16 173 9 226 311 39 0 chr5 64830466 64830569 -134799581 - L1ME3A LINE L1 -523 5647 5541 1368 215 56 91 chr5 64830569 64831053 -134799097 + MLT1C LTR MaLR 1 467 0 470 278 114 15 chr5 64831243 64831585 -134798565 - L1MEd LINE L1 -3615 2514 2139 539 158 0 0 chr5 64831629 64831711 -134798439 + AluJ/FLAM SINE Alu 1 82 -230 393 307 113 33 chr5 64832093 64832305 -134797845 - L1MEd LINE L1 -4443 1727 1458 24 0 0 0 chr5 64832323 64832347 -134797803 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 64832362 64832384 -134797766 + AT_rich Low_complexity Low_complexity 1 22 0 370 255 56 61 chr5 64832400 64832738 -134797412 - L1MEd LINE L1 -4869 1441 1064 1093 172 0 6 chr5 64832739 64832919 -134797231 - AluJ SINE Alu 0 312 134 1957 145 3 3 chr5 64832919 64833222 -134796928 - AluSx SINE Alu -5 307 5 6398 97 21 6 chr5 64833229 64834331 -134795819 - L1PA8 LINE L1 0 6172 5065 13303 121 3 4 chr5 64834331 64836384 -134793766 + L1P LINE L1 2226 4276 -1870 258 192 19 0 chr5 64836385 64836437 -134793713 - AluJ SINE Alu -169 133 81 1094 270 34 30 chr5 64836439 64836906 -134793244 - L1MEd LINE L1 -5047 1072 604 511 344 79 6 chr5 64837013 64837330 -134792820 - L1MEd LINE L1 -5731 388 49 190 310 70 10 chr5 64837378 64837478 -134792672 + MIR SINE MIR 150 255 -7 37134 89 12 7 chr5 64837490 64843605 -134786545 - L1PA6 LINE L1 -2 6152 11 356 284 127 8 chr5 64844620 64844754 -134785396 - MIR SINE MIR -5 257 108 255 361 52 0 chr5 64845482 64845579 -134784571 - L2 LINE L2 0 3272 3171 476 323 43 49 chr5 64845722 64846069 -134784081 - L2 LINE L2 -72 3241 2897 199 268 268 7 chr5 64846188 64846326 -134783824 - L2 LINE L2 -341 2973 2800 2351 84 0 0 chr5 64847078 64847365 -134782785 + AluSp SINE Alu 1 287 -26 361 291 68 10 chr5 64847382 64847485 -134782665 + MER5B DNA MER1_type 65 173 -5 501 313 12 18 chr5 64847847 64848010 -134782140 - MER5A DNA MER1_type -2 187 26 194 179 18 0 chr5 64848729 64848785 -134781365 + (TTCA)n Simple_repeat Simple_repeat 2 58 0 519 303 46 42 chr5 64848821 64849062 -134781088 - LTR16C LTR ERVL -13 478 237 211 333 131 10 chr5 64849340 64849439 -134780711 - L2 LINE L2 -28 3244 3134 398 298 49 82 chr5 64849880 64850125 -134780025 - L2 LINE L2 0 3272 3036 233 392 42 0 chr5 64850311 64850431 -134779719 + L2 LINE L2 2951 3075 -197 195 42 0 0 chr5 64850669 64850693 -134779457 + (TC)n Simple_repeat Simple_repeat 2 25 0 810 284 47 20 chr5 64851043 64851297 -134778853 - MIR SINE MIR 0 262 2 986 183 40 22 chr5 64851359 64851583 -134778567 - MER30 DNA MER1_type -2 228 1 248 306 31 9 chr5 64852376 64852536 -134777614 - MIR SINE MIR -7 255 44 257 283 9 19 chr5 64852768 64852874 -134777276 - MLT1L LTR MaLR -15 600 496 714 319 137 23 chr5 64853108 64853809 -134776341 + L1ME LINE L1 3878 4658 -1488 489 284 65 47 chr5 64853809 64854350 -134775800 + L1ME LINE L1 5174 5728 -434 1116 333 115 76 chr5 64855648 64856177 -134773973 - L1MC4 LINE L1 0 8042 7493 24 0 0 0 chr5 64856343 64856367 -134773783 + AT_rich Low_complexity Low_complexity 1 24 0 429 263 8 23 chr5 64856488 64856621 -134773529 - HAL1b LINE L1 -768 580 450 22 0 0 0 chr5 64857498 64857520 -134772630 + AT_rich Low_complexity Low_complexity 1 22 0 541 280 51 5 chr5 64859044 64859315 -134770835 + LTR16C LTR ERVL 179 491 0 346 336 34 20 chr5 64859622 64859771 -134770379 + MIR3 SINE MIR 58 208 0 2371 75 0 28 chr5 64859845 64860165 -134769985 + AluY SINE Alu 1 311 0 494 320 82 32 chr5 64861747 64861966 -134768184 + MIR SINE MIR 7 236 -26 292 294 12 0 chr5 64863511 64863596 -134766554 - MARNA DNA Mariner -27 559 474 24 32 0 0 chr5 64865472 64865503 -134764647 + AT_rich Low_complexity Low_complexity 1 31 0 426 312 34 67 chr5 64865625 64865894 -134764256 + L1MC4 LINE L1 7630 7889 -153 396 311 110 9 chr5 64866456 64866684 -134763466 - MIR SINE MIR 0 262 12 5039 132 34 47 chr5 64868983 64869890 -134760260 + MER4D LTR ERV1 5 899 -4 218 122 0 20 chr5 64869908 64869957 -134760193 + (TC)n Simple_repeat Simple_repeat 2 49 0 368 143 12 0 chr5 64870025 64870109 -134760041 + CT-rich Low_complexity Low_complexity 2 86 0 207 100 0 0 chr5 64870109 64870139 -134760011 + (CA)n Simple_repeat Simple_repeat 2 31 0 375 41 0 0 chr5 64870697 64870746 -134759404 + (CA)n Simple_repeat Simple_repeat 2 50 0 1191 164 103 17 chr5 64870928 64871214 -134758936 + MER61B LTR ERV1 1 396 -28 435 348 115 13 chr5 64871873 64872215 -134757935 + MER115 DNA AcHobo 34 433 -260 346 280 131 70 chr5 64922235 64922738 -134707412 - HAL1b LINE L1 -768 580 47 22 0 0 0 chr5 64923209 64923231 -134706919 + AT_rich Low_complexity Low_complexity 1 22 0 541 280 51 5 chr5 64924754 64925025 -134705125 + LTR16C LTR ERVL 179 491 0 368 333 27 20 chr5 64925332 64925482 -134704668 + MIR3 SINE MIR 58 208 0 2371 75 0 28 chr5 64925556 64925876 -134704274 + AluY SINE Alu 1 311 0 481 324 82 32 chr5 64927495 64927714 -134702436 + MIR SINE MIR 7 236 -26 316 282 12 0 chr5 64929259 64929344 -134700806 - MARNA DNA Mariner -27 559 474 24 32 0 0 chr5 64931207 64931238 -134698912 + AT_rich Low_complexity Low_complexity 1 31 0 360 288 38 64 chr5 64931360 64931627 -134698523 + L1MC4 LINE L1 7630 7889 -153 396 311 110 9 chr5 64932188 64932416 -134697734 - MIR SINE MIR 0 262 12 5039 132 34 47 chr5 64934838 64935745 -134694405 + MER4D LTR ERV1 5 899 -4 388 178 0 32 chr5 64935763 64935920 -134694230 + CT-rich Low_complexity Low_complexity 2 153 0 195 42 0 0 chr5 64935939 64935963 -134694187 + (TC)n Simple_repeat Simple_repeat 2 25 0 207 100 0 0 chr5 64935963 64935993 -134694157 + (CA)n Simple_repeat Simple_repeat 2 31 0 339 44 0 0 chr5 64936551 64936596 -134693554 + (CA)n Simple_repeat Simple_repeat 2 46 0 1191 164 103 17 chr5 64936778 64937064 -134693086 + MER61B LTR ERV1 1 396 -28 435 348 115 13 chr5 64937723 64938065 -134692085 + MER115 DNA AcHobo 34 433 -260 1884 172 84 19 chr5 64938079 64938545 -134691605 + LTR54B LTR ERV1 1 496 -2 2670 85 16 14 chr5 64938912 64939275 -134690875 + THE1B LTR MaLR 1 364 0 362 57 19 0 chr5 64942723 64942776 -134687374 + (CA)n Simple_repeat Simple_repeat 1 54 0 221 275 70 70 chr5 64942971 64942989 -134687161 - L2 LINE L2 -5 3308 3291 1576 207 64 6 chr5 64942989 64943332 -134686818 - MLT1A1 LTR MaLR 0 365 3 221 275 70 70 chr5 64943332 64943455 -134686695 - L2 LINE L2 -21 3292 3167 271 234 5 0 chr5 64944529 64944597 -134685553 + MIR SINE MIR 89 159 -49 240 273 30 0 chr5 64945274 64945340 -134684810 - MIR SINE MIR -105 157 90 702 285 68 72 chr5 64946063 64946590 -134683560 - MLT1H1 LTR MaLR 0 555 31 226 218 208 53 chr5 64946851 64946982 -134683168 + MIR SINE MIR 42 184 -62 269 348 52 26 chr5 64947546 64947701 -134682449 + MER117 DNA MER1_type 16 174 -23 499 290 71 53 chr5 64948059 64948224 -134681926 - L1ME4a LINE L1 -246 5875 5714 2448 192 64 41 chr5 64948224 64948832 -134681318 + MLT1E3 LTR MaLR 3 624 0 499 290 71 53 chr5 64948832 64948876 -134681274 - L1ME4a LINE L1 -407 5714 5672 2163 114 3 0 chr5 64948876 64949173 -134680977 - AluSx SINE Alu -14 298 1 499 290 71 53 chr5 64949173 64949355 -134680795 - L1ME4a LINE L1 -449 5672 5476 234 318 0 0 chr5 64949373 64949480 -134680670 - L1P LINE L1 -1089 5057 4951 28 61 0 0 chr5 64949497 64949546 -134680604 + AT_rich Low_complexity Low_complexity 1 49 0 1399 287 14 54 chr5 64950066 64950550 -134679600 + MLT1J LTR MaLR 44 508 -3 1963 122 43 45 chr5 64951996 64952372 -134677778 + THE1C LTR MaLR 1 375 0 2710 195 109 30 chr5 64952973 64953270 -134676880 + L1MD2 LINE L1 4461 4733 -1413 2293 104 3 10 chr5 64953270 64953579 -134676571 + AluSg SINE Alu 1 307 -3 2710 195 109 30 chr5 64953579 64954025 -134676125 + L1MD2 LINE L1 4733 5263 -883 1331 158 27 96 chr5 64954020 64954386 -134675764 + L1MB8 LINE L1 5833 6173 -5 * 264 30 0 0 chr5 64954520 64954553 -134675597 + (CA)n Simple_repeat Simple_repeat 2 34 0 614 287 41 15 chr5 64956356 64956551 -134673599 - MIR SINE MIR -62 200 1 318 26 0 0 chr5 64956908 64956947 -134673203 + (CA)n Simple_repeat Simple_repeat 2 40 0 227 314 145 17 chr5 64957906 64958078 -134672072 + MIR SINE MIR 65 258 -4 3236 235 46 24 chr5 64960820 64961697 -134668453 + L1MD2 LINE L1 5450 6345 -14 267 326 18 15 chr5 64961802 64961958 -134668192 - MLT1L LTR MaLR -56 532 376 31 0 0 0 chr5 64962845 64962876 -134667274 + AT_rich Low_complexity Low_complexity 1 31 0 216 0 0 0 chr5 64963882 64963906 -134666244 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 789 287 40 13 chr5 64964256 64964559 -134665591 - L1ME4a LINE L1 -237 5884 5574 24 32 0 0 chr5 64964568 64964599 -134665551 + AT_rich Low_complexity Low_complexity 1 31 0 36 53 0 0 chr5 64964776 64964833 -134665317 + AT_rich Low_complexity Low_complexity 1 57 0 376 380 39 13 chr5 64965248 64965477 -134664673 - MIR SINE MIR -27 235 1 183 80 0 0 chr5 64965489 64965514 -134664636 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 236 294 70 79 chr5 64965521 64965735 -134664415 - L2 LINE L2 -19 3294 3083 2346 134 86 2 chr5 64965739 64966134 -134664016 + MSTA LTR MaLR 1 428 0 8945 176 31 4 chr5 64966135 64967728 -134662422 + MSTA-int LTR MaLR 3 1637 -14 291 323 38 15 chr5 64967730 64967742 -134662408 - L2 LINE L2 -223 3090 3080 2449 147 39 7 chr5 64967742 64968157 -134661993 + MSTA LTR MaLR 1 428 0 291 323 38 15 chr5 64968157 64968277 -134661873 - L2 LINE L2 -233 3080 2955 1711 168 24 0 chr5 64968707 64968998 -134661152 - AluJo SINE Alu -6 306 9 461 289 124 27 chr5 64969337 64969562 -134660588 - MIR SINE MIR -14 248 2 20335 176 25 4 chr5 64969691 64969765 -134660385 + L1M1 LINE L1 16 87 -7553 294 29 0 0 chr5 64969765 64969800 -134660350 + (CA)n Simple_repeat Simple_repeat 2 36 0 20335 176 25 4 chr5 64969800 64974597 -134655553 + L1M1 LINE L1 87 5072 -2568 1685 125 64 67 chr5 64974597 64974910 -134655240 + AluSx SINE Alu 1 312 0 20335 176 25 4 chr5 64974910 64976776 -134653374 + L1M1 LINE L1 5072 6897 -743 1046 265 47 50 chr5 64976778 64977299 -134652851 + PABL_B LTR ERV1 1 663 -4 5736 86 11 11 chr5 64977301 64978128 -134652022 + L1MA1 LINE L1 5476 6302 0 2025 248 61 41 chr5 64979046 64979808 -134650342 + LTR27 LTR ERV1 2 506 -130 244 246 16 0 chr5 64979797 64979858 -134650292 + MER52A LTR ERV1 1612 1673 -82 * 248 236 178 40 chr5 64980277 64980451 -134649699 + L1MC4 LINE L1 7566 7763 -279 197 83 28 0 chr5 64980916 64980952 -134649198 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1969 142 0 0 chr5 64980958 64981269 -134648881 - AluY SINE Alu 0 311 1 227 200 43 43 chr5 64981950 64982020 -134648130 - L2 LINE L2 -4 3309 3240 267 93 0 0 chr5 64982163 64982206 -134647944 + (CA)n Simple_repeat Simple_repeat 2 44 0 1157 232 75 16 chr5 64982656 64982962 -134647188 + MLT2B1 LTR ERVL 1 324 -196 371 154 8 23 chr5 64983024 64983154 -134646996 + (TA)n Simple_repeat Simple_repeat 2 129 0 255 125 0 0 chr5 64983176 64983216 -134646934 + MLT2B1 LTR ERVL 473 512 -8 23 68 0 0 chr5 64984037 64984081 -134646069 + AT_rich Low_complexity Low_complexity 1 44 0 815 146 0 23 chr5 64984086 64984216 -134645934 + FLAM_C SINE Alu 3 129 -4 978 260 59 0 chr5 64984505 64984724 -134645426 + MIR SINE MIR 1 232 -30 226 276 76 9 chr5 64986265 64986370 -134643780 - MIR SINE MIR -24 238 127 724 200 0 29 chr5 64986773 64986913 -134643237 + AluJo SINE Alu 1 136 -176 1264 114 47 11 chr5 64987044 64987357 -134642793 + THE1C LTR MaLR 1 375 0 10679 106 16 27 chr5 64987357 64988955 -134641195 + THE1C-int LTR MaLR 1 1580 0 1140 98 51 14 chr5 64988955 64989268 -134640882 + THE1C LTR MaLR 1 375 0 280 336 9 28 chr5 64989268 64989375 -134640775 - L2 LINE L2 -27 3286 3182 1265 268 92 31 chr5 64990102 64990583 -134639567 + L2 LINE L2 2804 3313 0 2097 156 22 6 chr5 64991373 64991732 -134638418 - MER47A DNA MER2_type -1 365 1 3097 153 64 7 chr5 64992049 64992629 -134637521 - L1MB1 LINE L1 -211 5957 5345 250 139 0 0 chr5 64992628 64992671 -134637479 + L1M LINE L1 5254 5296 -1016 * 23 0 0 0 chr5 64992715 64992738 -134637412 + AT_rich Low_complexity Low_complexity 1 23 0 588 184 0 0 chr5 64992756 64992870 -134637280 - L1MB1 LINE L1 -850 5296 5183 194 128 26 0 chr5 64993222 64993261 -134636889 + GA-rich Low_complexity Low_complexity 1 40 0 2253 215 119 38 chr5 64993897 64994661 -134635489 + LTR1B LTR ERV1 1 826 0 549 330 15 59 chr5 64994847 64995171 -134634979 + L1MDa LINE L1 21 330 -6210 1845 167 187 51 chr5 64995240 64995641 -134634509 + MLT2B2 LTR ERVL 1 471 -44 306 0 0 0 chr5 64995641 64995675 -134634475 + (TG)n Simple_repeat Simple_repeat 1 34 0 1845 167 187 51 chr5 64995675 64995722 -134634428 + MLT2B2 LTR ERVL 471 510 -5 299 302 9 19 chr5 64995722 64995828 -134634322 + L1ME3A LINE L1 5786 5890 -280 3937 144 25 49 chr5 64995832 64996524 -134633626 + LTR8 LTR ERV1 1 675 -16 1994 109 0 4 chr5 64996698 64996965 -134633185 - AluSg SINE Alu -9 301 36 379 226 28 0 chr5 64997034 64997140 -134633010 + L1ME LINE L1 3702 3810 -2336 233 256 116 25 chr5 64997210 64997331 -134632819 + L1ME LINE L1 3805 3936 -2210 632 169 8 31 chr5 64997616 64997746 -134632404 + LTR59 LTR ERV1 1 127 -470 496 282 20 36 chr5 64997987 64998182 -134631968 - MLT1J LTR MaLR -317 194 3 289 340 45 19 chr5 64998184 64998452 -134631698 + L1ME LINE L1 4751 5025 -1121 255 267 42 51 chr5 64998678 64998895 -134631255 + L1P5 LINE L1 5293 5507 -644 436 332 42 46 chr5 64998896 64999203 -134630947 + L1ME LINE L1 5514 5819 -302 2081 191 41 35 chr5 64999615 65000077 -134630073 + MLT1C LTR MaLR 3 467 0 357 314 88 84 chr5 65000424 65000720 -134629430 - L2 LINE L2 -40 3232 2936 209 324 142 32 chr5 65000847 65001100 -134629050 - L2 LINE L2 -622 2692 2412 597 342 72 9 chr5 65001134 65001453 -134628697 - L2 LINE L2 -1160 2154 1816 4308 124 9 3 chr5 65001694 65002369 -134627781 - L1PB4 LINE L1 -6 6150 5472 737 172 31 0 chr5 65002680 65002808 -134627342 + FLAM_C SINE Alu 2 133 0 199 0 0 61 chr5 65002814 65002847 -134627303 + (TA)n Simple_repeat Simple_repeat 1 31 0 1116 171 104 93 chr5 65003121 65003436 -134626714 + AluJb SINE Alu 2 319 0 26 30 0 0 chr5 65003767 65003800 -134626350 + AT_rich Low_complexity Low_complexity 1 33 0 2175 112 0 3 chr5 65003875 65004161 -134625989 + AluSx SINE Alu 1 285 -27 228 148 40 20 chr5 65004161 65004262 -134625888 + (TA)n Simple_repeat Simple_repeat 2 104 0 1846 113 4 25 chr5 65005018 65005292 -134624858 + AluSg SINE Alu 38 305 -5 2093 58 0 15 chr5 65006719 65006993 -134623157 + AluY SINE Alu 1 270 -41 1639 100 17 13 chr5 65007094 65007333 -134622817 - AluSg SINE Alu -70 240 1 1630 199 7 0 chr5 65007364 65007646 -134622504 + AluJb SINE Alu 4 287 -25 2259 247 42 23 chr5 65007742 65007927 -134622223 - L1ME2 LINE L1 -108 6336 6156 1617 69 0 10 chr5 65007927 65008129 -134622021 - AluSg/x SINE Alu -2 308 109 2259 247 42 23 chr5 65008129 65009190 -134620960 - L1ME2 LINE L1 -288 6156 5061 313 313 43 0 chr5 65009190 65009317 -134620833 - L1ME2 LINE L1 -4657 1769 1490 360 0 0 0 chr5 65009320 65009360 -134620790 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 4454 160 23 26 chr5 65009360 65010558 -134619592 - L1PA16 LINE L1 -25 7560 6364 1401 139 30 4 chr5 65010576 65010843 -134619307 - L1MA2 LINE L1 -65 6239 5966 * 16210 157 32 17 chr5 65010836 65011477 -134618673 - L1PA16 LINE L1 -4570 2995 2365 2443 122 8 13 chr5 65011477 65011854 -134618296 + THE1C LTR MaLR 1 375 0 16210 157 32 17 chr5 65011854 65014148 -134616002 - L1PA16 LINE L1 -5200 2365 16 4821 208 29 25 chr5 65014152 65015509 -134614641 - L1PA15-16 LINE L1 -3753 3096 1735 505 276 49 0 chr5 65015629 65015752 -134614398 - MIR SINE MIR -113 149 21 40694 53 2 1 chr5 65015836 65021978 -134608172 + L1PA4 LINE L1 1 6150 -5 25 0 0 0 chr5 65022662 65022687 -134607463 + AT_rich Low_complexity Low_complexity 1 25 0 1784 256 74 21 chr5 65024436 65025014 -134605136 - MLT1E2 LTR MaLR -17 609 1 1118 313 96 62 chr5 65025485 65026719 -134603431 - HERV16 LTR ERVL -1731 4033 2758 1176 318 24 36 chr5 65026926 65027704 -134602446 - HERV16 LTR ERVL -2873 2123 1665 933 178 181 4 chr5 65027775 65028045 -134602105 - MER33 DNA MER1_type 0 324 7 287 269 34 136 chr5 65028061 65028325 -134601825 - LTR16A1 LTR ERVL -195 262 26 327 241 312 0 chr5 65028600 65028741 -134601409 + MER5A DNA MER1_type 5 189 0 27201 37 2 0 chr5 65029574 65033839 -134596311 + L1PA4 LINE L1 2892 7574 0 32 26 0 0 chr5 65033839 65033878 -134596272 + AT_rich Low_complexity Low_complexity 1 39 0 371 327 0 19 chr5 65034193 65034300 -134595850 + MIR SINE MIR 49 153 -109 359 333 18 30 chr5 65034321 65034489 -134595661 + L3 LINE CR1 1184 1349 -228 10746 52 3 0 chr5 65034489 65035905 -134594245 - L1PA4 LINE L1 -1228 4918 3498 7130 40 8 8 chr5 65035905 65037157 -134592993 + L1PA4 LINE L1 4904 6155 0 493 325 61 22 chr5 65037157 65037388 -134592762 + L3 LINE CR1 1337 1576 -1 371 190 38 0 chr5 65040178 65040257 -134589893 + MLT1G1 LTR MaLR 6 87 -508 6264 190 19 36 chr5 65040287 65041553 -134588597 + L1P LINE L1 2447 3683 -2463 354 23 0 0 chr5 65041553 65041596 -134588554 + (CA)n Simple_repeat Simple_repeat 2 44 0 6264 190 19 36 chr5 65041596 65041865 -134588285 + L1P LINE L1 3683 3955 -2191 811 190 45 48 chr5 65042531 65042800 -134587350 + MER69 DNA AcHobo 2168 2435 -91 21 36 0 0 chr5 65042932 65042960 -134587190 + AT_rich Low_complexity Low_complexity 1 28 0 194 273 61 0 chr5 65043135 65043201 -134586949 - L2 LINE L2 0 3272 3203 723 307 171 24 chr5 65043240 65043654 -134586496 - MLT1K LTR MaLR -3 585 111 935 211 39 10 chr5 65043869 65044073 -134586077 + MER63A DNA MER1_type 1 210 0 3955 224 25 25 chr5 65044824 65046099 -134584051 + L1MCb LINE L1 1 1284 -4853 2229 149 22 0 chr5 65046173 65046529 -134583621 + THE1B LTR MaLR 1 364 0 207 0 0 0 chr5 65047452 65047475 -134582675 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1863 114 12 0 chr5 65047479 65047734 -134582416 - AluSx SINE Alu -33 279 22 673 324 79 33 chr5 65049084 65049608 -134580542 + L2 LINE L2 2467 3029 -243 937 214 35 0 chr5 65050016 65050189 -134579961 - MER5A DNA MER1_type -10 179 1 320 366 8 24 chr5 65050332 65050455 -134579695 + MIR3 SINE MIR 87 207 -1 3144 130 54 27 chr5 65050715 65051268 -134578882 - L1PA16 LINE L1 -11 6155 5588 231 141 94 0 chr5 65052583 65052647 -134577503 - MLT1G LTR MaLR -2 588 519 709 242 63 21 chr5 65054084 65054274 -134575876 - MIR SINE MIR 0 262 65 2349 213 61 38 chr5 65055109 65055829 -134574321 - MER99 DNA DNA -90 738 2 2953 214 38 26 chr5 65056601 65056877 -134573273 - L1ME1 LINE L1 -5 6230 5959 2213 120 20 0 chr5 65056877 65057177 -134572973 - AluSg SINE Alu -3 307 2 2953 214 38 26 chr5 65057177 65057873 -134572277 - L1ME1 LINE L1 -276 5959 5250 40675 36 21 1 chr5 65057937 65063970 -134566180 - L1PA2 LINE L1 0 6155 3 324 219 12 0 chr5 65063977 65064059 -134566091 - L1ME1 LINE L1 -997 5218 5136 240 85 170 21 chr5 65064097 65064144 -134566006 - MLT2B1 LTR ERVL 0 520 467 214 164 55 0 chr5 65064148 65064203 -134565947 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 305 333 0 0 chr5 65064219 65064309 -134565841 - L1MC4 LINE L1 -1339 6703 6614 1895 204 18 26 chr5 65064332 65064719 -134565431 - MLT2B1 LTR ERVL -135 385 2 1559 248 51 18 chr5 65064736 65065245 -134564905 - L1ME1 LINE L1 -1179 5036 4511 375 23 0 0 chr5 65065278 65065322 -134564828 + (TG)n Simple_repeat Simple_repeat 2 45 0 242 197 0 13 chr5 65065355 65065431 -134564719 - L1ME1 LINE L1 -5326 1070 996 518 223 37 27 chr5 65065450 65065638 -134564512 - L1ME1 LINE L1 -5451 945 756 1926 78 70 15 chr5 65065685 65065955 -134564195 - AluY SINE Alu -26 285 1 1147 244 7 7 chr5 65065955 65066250 -134563900 - L1ME1 LINE L1 -5630 766 472 11444 186 41 10 chr5 65066303 65069364 -134560786 + L1MB3 LINE L1 18 3178 -3204 1193 161 0 6 chr5 65069369 65069549 -134560601 + AluSx SINE Alu 1 179 -133 4411 190 31 32 chr5 65069550 65069641 -134560509 + L1MB3 LINE L1 4542 4632 -1787 1488 196 45 25 chr5 65069641 65069999 -134560151 - MLT1A1 LTR MaLR 0 365 1 4411 190 31 32 chr5 65069999 65070616 -134559534 + L1MB3 LINE L1 4632 5248 -1171 1996 137 64 19 chr5 65070616 65070975 -134559175 - THE1C LTR MaLR 0 375 1 4411 190 31 32 chr5 65070975 65071686 -134558464 + L1MB3 LINE L1 5248 5957 -462 3024 123 5 0 chr5 65071686 65072118 -134558032 + MER57B LTR ERV1 1 434 0 4411 190 31 32 chr5 65072118 65072581 -134557569 + L1MB3 LINE L1 5957 6419 0 380 319 53 53 chr5 65072593 65072800 -134557350 + L3 LINE CR1 1336 1542 -35 344 218 20 30 chr5 65073347 65073448 -134556702 - LTR33 LTR ERVL 0 521 422 614 298 64 9 chr5 65073495 65073713 -134556437 - LTR33 LTR ERVL -234 287 58 497 270 63 54 chr5 65073912 65074134 -134556016 + L2 LINE L2 3084 3307 -6 221 330 89 18 chr5 65074767 65074879 -134555271 - L2 LINE L2 -18 3295 3176 184 123 0 35 chr5 65074882 65074939 -134555211 + (TTTTC)n Simple_repeat Simple_repeat 1 55 0 1322 254 152 23 chr5 65075467 65075986 -134554164 + L2 LINE L2 2183 2768 -546 214 156 52 52 chr5 65075990 65076067 -134554083 + (TCTCTG)n Simple_repeat Simple_repeat 6 82 0 224 264 6 0 chr5 65076071 65076245 -134553905 + (TG)n Simple_repeat Simple_repeat 2 176 0 300 253 0 24 chr5 65076248 65076331 -134553819 + (TATATG)n Simple_repeat Simple_repeat 2 82 0 560 218 184 60 chr5 65076332 65076764 -134553386 + L2 LINE L2 2786 3294 -19 1661 185 3 12 chr5 65077533 65077862 -134552288 - L1PBb LINE L1 -5867 337 12 * 4744 181 10 2 chr5 65077834 65078744 -134551406 - L1PBa LINE L1 -5220 1643 727 5010 102 80 24 chr5 65078747 65079848 -134550302 + pTR5 LTR ERV1 743 2025 -413 313 255 10 0 chr5 65079848 65079946 -134550204 + LTR30 LTR ERV1 544 642 -80 1431 103 0 9 chr5 65079949 65080172 -134549978 + pTR5 LTR ERV1 172 392 -2046 3176 216 22 8 chr5 65080175 65080888 -134549262 - L1PBa LINE L1 -6139 724 2 1075 168 133 51 chr5 65080892 65081208 -134548942 + MER4A LTR ERV1 1 342 -322 425 127 262 16 chr5 65081263 65081389 -134548761 + MER4C LTR ERV1 291 447 -18 909 288 79 49 chr5 65081778 65082209 -134547941 + MLT1K LTR MaLR 3 446 -142 904 232 22 22 chr5 65082428 65082652 -134547498 + LTR10B LTR ERV1 324 547 0 24747 258 34 29 chr5 65082652 65090392 -134539758 + HERVI LTR ERV1 2 7784 -1 867 221 29 41 chr5 65090577 65090821 -134539329 + LTR10B LTR ERV1 307 547 0 371 246 119 8 chr5 65090825 65090951 -134539199 + MLT1K LTR MaLR 449 588 0 1013 240 47 4 chr5 65091029 65091262 -134538888 - MIR SINE MIR 0 262 20 22 0 0 0 chr5 65091599 65091621 -134538529 + AT_rich Low_complexity Low_complexity 1 22 0 513 250 176 0 chr5 65092043 65092191 -134537959 - MER5B DNA MER1_type -4 174 1 449 176 229 7 chr5 65092212 65092365 -134537785 - MER53 DNA DNA -1 188 2 1153 242 43 43 chr5 65092537 65092884 -134537266 - MLT1E2 LTR MaLR -279 347 1 605 226 200 19 chr5 65092947 65093212 -134536938 - HAL1 LINE L1 -794 1713 1401 1781 199 46 11 chr5 65093348 65093826 -134536324 - L1M4 LINE L1 -1987 4861 4367 353 300 83 86 chr5 65094539 65095164 -134534986 - L1M4 LINE L1 -5595 1254 573 295 327 78 20 chr5 65095531 65095684 -134534466 - MIR SINE MIR -71 191 30 205 303 30 20 chr5 65096681 65096780 -134533370 + MIR SINE MIR 118 217 -45 743 289 63 38 chr5 65096873 65097316 -134532834 + MARNA DNA Mariner 80 533 -53 1511 190 133 14 chr5 65097665 65098108 -134532042 - LTR54B LTR ERV1 -2 496 1 3533 233 35 19 chr5 65098108 65099034 -134531116 - MER57-int LTR ERV1 -393 7144 6205 265 367 24 6 chr5 65098906 65099075 -134531075 - MER70-int LTR ERVL -739 4284 4113 * 923 182 85 6 chr5 65099372 65099548 -134530602 - MER110-int LTR ERV1 -762 4109 3920 579 354 46 41 chr5 65099605 65100329 -134529821 - MER110-int LTR ERV1 -1794 2853 2127 600 313 33 22 chr5 65101564 65101917 -134528233 - MER110-int LTR ERV1 -4093 2708 211 5762 170 35 40 chr5 65102185 65102573 -134527577 - L1MA6 LINE L1 0 7321 6933 2242 108 0 0 chr5 65102573 65102869 -134527281 - AluSg SINE Alu -14 296 1 5762 170 35 40 chr5 65102869 65103816 -134526334 - L1MA6 LINE L1 -388 6933 6011 2326 103 3 0 chr5 65103816 65104127 -134526023 - AluSx SINE Alu 0 312 1 5762 170 35 40 chr5 65104127 65104883 -134525267 - L1MA6 LINE L1 -1310 6011 5253 1780 162 83 17 chr5 65104888 65105296 -134524854 - L1MA6 LINE L1 -2547 4620 4186 266 189 75 0 chr5 65105318 65105371 -134524779 - L1MA6 LINE L1 -7108 60 4 244 382 22 53 chr5 65106046 65106271 -134523879 + L2 LINE L2 2861 3078 -194 306 50 0 0 chr5 65106387 65106427 -134523723 + (TA)n Simple_repeat Simple_repeat 2 41 0 1247 248 122 38 chr5 65106554 65106777 -134523373 - LTR33 LTR ERVL -4 517 314 2314 105 0 0 chr5 65106777 65107081 -134523069 + AluSc SINE Alu 1 304 -5 1247 248 122 38 chr5 65107081 65107333 -134522817 - LTR33 LTR ERVL -207 314 2 23 0 0 0 chr5 65107545 65107568 -134522582 + AT_rich Low_complexity Low_complexity 1 23 0 277 327 30 40 chr5 65107751 65107852 -134522298 - MER5B DNA MER1_type -77 101 2 35 24 0 0 chr5 65108049 65108091 -134522059 + AT_rich Low_complexity Low_complexity 1 42 0 1095 280 92 21 chr5 65108533 65109146 -134521004 - L1ME3 LINE L1 -336 5826 5161 228 83 111 0 chr5 65109835 65109871 -134520279 - MLT2A2 LTR ERVL 0 453 414 * 2104 128 22 33 chr5 65109869 65110277 -134519873 - MLT2A2 LTR ERVL -145 308 1 2248 68 4 4 chr5 65110930 65111210 -134518940 - AluY SINE Alu -9 302 23 457 194 51 0 chr5 65112129 65112227 -134517923 + MIR SINE MIR 97 199 -63 1946 148 7 0 chr5 65112383 65112687 -134517463 - AluSx SINE Alu -4 308 3 2122 155 8 50 chr5 65112828 65113229 -134516921 + MLT1B LTR MaLR 6 389 -1 566 205 62 41 chr5 65113332 65113527 -134516623 - L1MC5 LINE L1 -733 7228 7030 439 306 0 9 chr5 65113585 65113693 -134516457 + L1MEd LINE L1 498 604 -5515 766 286 124 12 chr5 65113805 65114184 -134515966 + L2 LINE L2 2128 2624 -690 23 54 0 0 chr5 65114265 65114302 -134515848 + AT_rich Low_complexity Low_complexity 1 37 0 1724 173 41 51 chr5 65116557 65116951 -134513199 + MLT1B LTR MaLR 1 390 0 1857 201 10 47 chr5 65116952 65117506 -134512644 + MLT1B-int LTR MaLR 2 652 -719 304 231 15 0 chr5 65117532 65117597 -134512553 + MLT1B-int LTR MaLR 819 884 -487 2005 219 52 19 chr5 65117832 65118297 -134511853 + MLT1B-int LTR MaLR 1256 1735 0 1683 185 67 21 chr5 65118298 65118671 -134511479 + MLT1B LTR MaLR 1 390 0 1329 165 57 77 chr5 65118846 65119198 -134510952 - L1MC2 LINE L1 -8 6336 5992 2049 184 40 13 chr5 65119369 65119846 -134510304 - L1MA10 LINE L1 -827 5319 4830 4282 234 31 46 chr5 65119851 65120123 -134510027 + L1MA10 LINE L1 5297 5571 -763 2204 104 0 0 chr5 65120123 65120421 -134509729 + AluSg SINE Alu 2 299 -11 4282 234 31 46 chr5 65120421 65120668 -134509482 + L1MA10 LINE L1 5571 5820 -514 423 0 0 0 chr5 65120668 65120715 -134509435 + (TA)n Simple_repeat Simple_repeat 2 48 0 4282 234 31 46 chr5 65120715 65121247 -134508903 + L1MA10 LINE L1 5820 6334 0 7261 29 3 0 chr5 65121779 65122653 -134507497 - L1PA4 LINE L1 -2 6153 5280 374 179 54 89 chr5 65122671 65122783 -134507367 - L1ME3A LINE L1 -12 6158 6051 3163 169 38 7 chr5 65123273 65123823 -134506327 - MER6A DNA MER2_type 0 605 39 275 254 63 0 chr5 65123830 65123893 -134506257 - MER6A DNA MER2_type -538 67 1 926 275 41 72 chr5 65123933 65124660 -134505490 - L1 LINE L1 -1920 4226 3522 21 0 0 0 chr5 65124748 65124769 -134505381 + AT_rich Low_complexity Low_complexity 1 21 0 1853 218 100 14 chr5 65125097 65125597 -134504553 + Charlie1a DNA MER1_type 2 544 -911 224 355 11 0 chr5 65125629 65125717 -134504433 + MER5A DNA MER1_type 66 166 -23 311 231 8 127 chr5 65125723 65125814 -134504336 - L2 LINE L2 -273 3040 2968 881 197 190 0 chr5 65125814 65126083 -134504067 - MER33 DNA MER1_type -4 320 1 311 231 8 127 chr5 65126083 65126125 -134504025 - L2 LINE L2 -345 2968 2923 2272 90 0 7 chr5 65126595 65126895 -134503255 - AluSq SINE Alu -15 298 1 435 276 61 43 chr5 65127254 65127417 -134502733 + MER5B DNA MER1_type 13 178 0 267 377 38 0 chr5 65127432 65127538 -134502612 + L2 LINE L2 3157 3266 -6 1626 156 0 77 chr5 65128025 65128352 -134501798 + AluJo SINE Alu 1 302 -10 1666 85 0 5 chr5 65129626 65129838 -134500312 - AluSg/x SINE Alu -25 285 75 2326 251 82 4 chr5 65129934 65130688 -134499462 - L1ME2 LINE L1 -38 6126 5315 607 241 21 0 chr5 65130699 65130840 -134499310 - MIR SINE MIR -111 151 8 439 237 168 21 chr5 65131211 65131401 -134498749 - L1MB8 LINE L1 -16 6162 5945 21 57 0 0 chr5 65131456 65131491 -134498659 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr5 65131711 65131741 -134498409 + AT_rich Low_complexity Low_complexity 1 30 0 249 234 250 0 chr5 65131915 65132043 -134498107 - L1ME3A LINE L1 -230 5940 5781 513 278 152 4 chr5 65132104 65132334 -134497816 - L1ME3A LINE L1 -413 5757 5494 227 221 152 39 chr5 65132351 65132582 -134497568 - L1ME3A LINE L1 -773 5373 5117 309 301 124 72 chr5 65132599 65132808 -134497342 - L1MEd LINE L1 -5646 473 254 445 342 100 17 chr5 65133406 65133707 -134496443 - L2 LINE L2 -961 2353 2028 301 273 164 36 chr5 65133909 65134019 -134496131 + MER91C DNA MER1_type 16 139 -1 1262 232 108 6 chr5 65134490 65134843 -134495307 + MLT1B LTR MaLR 1 389 -1 42 86 0 0 chr5 65134939 65135044 -134495106 + AT_rich Low_complexity Low_complexity 1 105 0 462 320 135 27 chr5 65135148 65135539 -134494611 - L2 LINE L2 -247 3066 2630 23 33 0 0 chr5 65136808 65136838 -134493312 + AT_rich Low_complexity Low_complexity 1 30 0 240 215 31 15 chr5 65137012 65137077 -134493073 + MIR SINE MIR 194 259 -3 334 294 0 22 chr5 65137418 65137510 -134492640 - MER5A DNA MER1_type -98 91 2 275 200 120 82 chr5 65138016 65138043 -134492107 - MER34 LTR ERV1 -321 386 361 3207 117 27 83 chr5 65138043 65138682 -134491468 - LTR26 LTR ERV1 0 603 1 275 200 120 82 chr5 65138682 65138862 -134491288 - MER34 LTR ERV1 -346 361 1 216 97 0 0 chr5 65139587 65139618 -134490532 + (CA)n Simple_repeat Simple_repeat 2 32 0 247 194 56 0 chr5 65139620 65139692 -134490458 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 413 211 49 49 chr5 65139700 65139823 -134490327 + L2 LINE L2 3148 3270 -43 24 53 0 0 chr5 65143640 65143678 -134486472 + AT_rich Low_complexity Low_complexity 1 38 0 2693 201 72 88 chr5 65144039 65144813 -134485337 - L1MD2 LINE L1 -245 6114 5346 1597 157 4 35 chr5 65144813 65145074 -134485076 + AluJo SINE Alu 6 258 -54 2693 201 72 88 chr5 65145074 65145338 -134484812 - L1MD2 LINE L1 -1013 5346 5079 353 244 83 39 chr5 65145441 65145621 -134484529 - L1MD2 LINE L1 -3090 3056 2869 234 304 54 0 chr5 65146830 65146886 -134483264 + L2 LINE L2 3246 3304 -9 2451 142 14 12 chr5 65146892 65147308 -134482842 - L1MC3 LINE L1 -15 7770 7354 2707 197 78 2 chr5 65147308 65147395 -134482755 - MER68 LTR ERV1 0 562 483 837 37 19 0 chr5 65147395 65147502 -134482648 - L1PA4 LINE L1 -1 6154 6046 2707 197 78 2 chr5 65147502 65147936 -134482214 - MER68 LTR ERV1 -79 483 1 555 144 82 0 chr5 65147936 65148033 -134482117 - L1MC3 LINE L1 -427 7358 7254 2224 186 81 6 chr5 65148084 65148551 -134481599 - MLT1D LTR MaLR -3 502 1 566 266 176 5 chr5 65148552 65148751 -134481399 - MIR SINE MIR -25 237 5 290 333 0 11 chr5 65148852 65148939 -134481211 - L2 LINE L2 -1 3312 3227 378 0 0 0 chr5 65149169 65149211 -134480939 + (TG)n Simple_repeat Simple_repeat 2 43 0 193 313 15 0 chr5 65149642 65149709 -134480441 - MIR SINE MIR -10 252 185 807 208 141 76 chr5 65149836 65150177 -134479973 + MLT1A1 LTR MaLR 1 363 -2 1982 107 79 10 chr5 65150393 65150796 -134479354 + SVA Other Other 438 868 -518 6083 91 42 39 chr5 65150839 65151791 -134478359 + SVA Other Other 432 1386 0 281 132 57 0 chr5 65151791 65151844 -134478306 + MLT1D LTR MaLR 438 493 -12 203 0 37 0 chr5 65152916 65152943 -134477207 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1670 193 7 3 chr5 65153341 65153637 -134476513 + AluJb SINE Alu 1 297 -15 1983 159 0 10 chr5 65154024 65154333 -134475817 - AluJb SINE Alu -6 306 1 1449 221 66 52 chr5 65155334 65155832 -134474318 - MLT1D LTR MaLR 0 505 1 200 211 147 110 chr5 65157382 65157491 -134472659 - MER5A DNA MER1_type 0 189 77 465 125 0 0 chr5 65157518 65157582 -134472568 - FRAM SINE Alu -55 121 58 775 295 90 0 chr5 65157849 65158083 -134472067 - MIR SINE MIR 0 262 8 323 321 55 12 chr5 65158209 65158374 -134471776 + MIR SINE MIR 91 262 0 538 174 9 0 chr5 65158769 65158878 -134471272 + MER41B LTR ERV1 481 590 -45 182 339 81 40 chr5 65159088 65159212 -134470938 + MIR SINE MIR 2 130 -132 2033 127 3 3 chr5 65159294 65159585 -134470565 + AluSx SINE Alu 3 293 -19 2555 58 0 0 chr5 65159696 65160007 -134470143 - AluY SINE Alu 0 311 1 1701 176 3 23 chr5 65160108 65160409 -134469741 + AluJb SINE Alu 6 300 -12 1373 163 84 64 chr5 65160757 65161100 -134469050 + THE1C LTR MaLR 26 375 0 9639 128 8 46 chr5 65161103 65162742 -134467408 + MSTA-int LTR MaLR 4 1580 0 1409 138 157 106 chr5 65162742 65163149 -134467001 + MSTA LTR MaLR 1 428 0 3461 169 21 5 chr5 65163150 65164019 -134466131 - L1MB1 LINE L1 -213 5955 5077 389 293 293 0 chr5 65164312 65164452 -134465698 + MER5A DNA MER1_type 9 189 0 286 306 9 0 chr5 65165351 65165462 -134464688 - MER103 DNA DNA -36 130 19 802 327 124 19 chr5 65165736 65166115 -134464035 + L2 LINE L2 2827 3245 -68 268 242 66 11 chr5 65166397 65166488 -134463662 + MLT1L LTR MaLR 195 290 -325 1810 239 46 34 chr5 65166740 65167266 -134462884 + L1M3e LINE L1 511 1042 -6447 928 229 49 7 chr5 65167353 65167687 -134462463 + L1M3e LINE L1 2313 2665 -4831 424 254 76 5 chr5 65167700 65167885 -134462265 + L1M3e LINE L1 2497 2694 -4871 29172 115 12 61 chr5 65167906 65174374 -134455776 + L1PA7 LINE L1 13 6154 0 1226 185 59 11 chr5 65174382 65174669 -134455481 + L1M3e LINE L1 3020 3320 -4246 8208 161 91 109 chr5 65174673 65176554 -134453596 + L1M3e LINE L1 3645 5698 -1867 1064 184 94 30 chr5 65176554 65176788 -134453362 - AluJo SINE Alu -24 288 40 8208 161 91 109 chr5 65176788 65177398 -134452752 + L1M3e LINE L1 5698 6318 -1247 1168 185 59 0 chr5 65177400 65177686 -134452464 + L1MA8 LINE L1 5988 6290 -1 237 245 0 0 chr5 65178999 65179048 -134451102 + MIR SINE MIR 211 259 -3 21 0 0 0 chr5 65179063 65179084 -134451066 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 65180206 65180231 -134449919 + AT_rich Low_complexity Low_complexity 1 25 0 14780 38 0 2 chr5 65180314 65182884 -134447266 - L1PA5 LINE L1 0 6154 3584 794 47 0 0 chr5 65182884 65182991 -134447159 + L1P LINE L1 2522 2628 -3518 358 297 142 62 chr5 65183421 65184000 -134446150 - L2 LINE L2 -604 2710 2086 190 219 0 0 chr5 65184011 65184052 -134446098 - L2 LINE L2 -2430 884 844 234 0 0 0 chr5 65184141 65184167 -134445983 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2237 87 6 13 chr5 65184750 65185061 -134445089 + AluSp SINE Alu 1 309 -4 263 282 18 9 chr5 65185165 65185275 -134444875 + (TA)n Simple_repeat Simple_repeat 1 111 0 346 307 35 18 chr5 65185373 65185487 -134444663 - L1ME LINE L1 -297 5824 5709 234 327 20 40 chr5 65185606 65185707 -134444443 + MIR3 SINE MIR 93 191 -17 584 291 75 38 chr5 65185774 65185987 -134444163 + MIR SINE MIR 21 241 -21 1065 167 5 33 chr5 65186845 65187055 -134443095 - MER89 LTR ERV1 -1 558 355 184 382 10 49 chr5 65188104 65188206 -134441944 + MIR SINE MIR 8 105 -157 278 253 93 27 chr5 65188223 65188373 -134441777 + L1ME3A LINE L1 6003 6162 -8 654 280 124 0 chr5 65188373 65188559 -134441591 + MER63A DNA MER1_type 1 209 -1 323 292 108 8 chr5 65188966 65189096 -134441054 - L1ME3A LINE L1 -219 5951 5809 8593 97 8 1 chr5 65189332 65191353 -134438797 - L1PA8 LINE L1 -5 6167 4132 769 222 70 86 chr5 65191934 65192249 -134437901 + MER46C DNA MER2_type 6 315 -23 1376 215 48 64 chr5 65192295 65192450 -134437700 - Charlie4a DNA MER1_type -1453 508 352 213 39 0 0 chr5 65192450 65192476 -134437674 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2961 21 0 0 chr5 65192476 65192815 -134437335 - L1PA2 LINE L1 -13 6142 5804 1376 215 48 64 chr5 65192815 65193174 -134436976 - Charlie4a DNA MER1_type -1607 354 1 595 122 0 51 chr5 65194358 65194456 -134435694 - FRAM SINE Alu -26 150 58 207 0 0 0 chr5 65195138 65195161 -134434989 + (CA)n Simple_repeat Simple_repeat 2 24 0 597 267 20 7 chr5 65195631 65195777 -134434373 - MIR SINE MIR -56 206 59 1088 119 0 0 chr5 65196574 65196734 -134433416 + Tigger3(Golem) DNA MER2_type 2846 3005 -24 736 363 112 17 chr5 65197155 65198121 -134432029 - L2 LINE L2 -2 3270 2215 2576 98 0 8 chr5 65198152 65198528 -134431622 + MER41B LTR ERV1 175 547 -88 24 0 0 0 chr5 65198887 65198911 -134431239 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 65199181 65199202 -134430948 + AT_rich Low_complexity Low_complexity 1 21 0 507 350 41 55 chr5 65199339 65199827 -134430323 - L1MEd LINE L1 -5192 927 447 21 0 0 0 chr5 65201298 65201319 -134428831 + AT_rich Low_complexity Low_complexity 1 21 0 360 0 0 0 chr5 65201430 65201470 -134428680 + (TG)n Simple_repeat Simple_repeat 2 41 0 27 0 0 0 chr5 65201788 65201815 -134428335 + AT_rich Low_complexity Low_complexity 1 27 0 438 200 69 40 chr5 65202159 65202298 -134427852 + MLT1A2 LTR MaLR 1 151 -214 287 347 62 5 chr5 65202791 65202984 -134427166 - MLT1L LTR MaLR -203 412 209 696 167 0 32 chr5 65203901 65204027 -134426123 - FLAM_C SINE Alu -19 124 3 504 343 115 26 chr5 65204034 65204451 -134425699 - L2 LINE L2 -1008 2306 1853 314 237 224 13 chr5 65204637 65204793 -134425357 + L1ME4a LINE L1 5911 6099 -22 1549 121 0 0 chr5 65204920 65205126 -134425024 + AluSx SINE Alu 1 206 -106 14766 222 50 13 chr5 65205137 65206616 -134423534 - L1P4 LINE L1 -711 6105 4681 2182 111 3 0 chr5 65206616 65206905 -134423245 - AluSg SINE Alu -20 290 1 14766 222 50 13 chr5 65206905 65208580 -134421570 - L1P4 LINE L1 -2135 4681 3068 2142 127 24 35 chr5 65208580 65208957 -134421193 + THE1C LTR MaLR 1 373 -2 14766 222 50 13 chr5 65208957 65211240 -134418910 - L1P4 LINE L1 -3748 3068 97 2100 130 0 0 chr5 65212077 65212369 -134417781 - AluSg SINE Alu -13 297 6 22734 182 51 22 chr5 65212595 65216522 -134413628 - L1P4 LINE L1 -567 5914 1657 2501 70 0 10 chr5 65216522 65216836 -134413314 - AluY SINE Alu 0 311 1 22734 182 51 22 chr5 65216836 65218536 -134411614 - L1P4 LINE L1 -4824 1657 8 26 0 0 0 chr5 65218604 65218630 -134411520 + AT_rich Low_complexity Low_complexity 1 26 0 40 21 0 0 chr5 65218730 65218777 -134411373 + AT_rich Low_complexity Low_complexity 1 47 0 1113 74 0 181 chr5 65219257 65219500 -134410650 + L1MA1 LINE L1 6104 6302 0 1210 252 47 18 chr5 65219901 65220282 -134409868 - L1ME2 LINE L1 -15 6149 5758 311 300 0 12 chr5 65220942 65221022 -134409128 - L2 LINE L2 -22 3250 3172 22 0 0 0 chr5 65222591 65222613 -134407537 + AT_rich Low_complexity Low_complexity 1 22 0 226 204 0 0 chr5 65222613 65222667 -134407483 - L1PB4 LINE L1 0 6156 6103 2719 80 149 0 chr5 65223015 65223439 -134406711 - L1PA12 LINE L1 -2 6166 5680 743 130 46 8 chr5 65223444 65223575 -134406575 - L1PA12 LINE L1 -1084 5062 4927 523 239 156 17 chr5 65223740 65223797 -134406353 - MER57A LTR ERV1 0 403 355 207 69 0 0 chr5 65223797 65223826 -134406324 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 523 239 156 17 chr5 65223826 65223948 -134406202 - MER57A LTR ERV1 -48 355 199 457 138 75 0 chr5 65224005 65224085 -134406065 - LTR54B LTR ERV1 -412 86 1 * 1496 210 14 43 chr5 65224085 65224410 -134405740 + MLT1A1 LTR MaLR 47 361 -4 3135 199 28 3 chr5 65224871 65225439 -134404711 + Tigger7 DNA MER2_type 1 582 -1905 280 178 0 0 chr5 65225488 65225533 -134404617 + Tigger5 DNA MER2_type 2279 2323 0 265 262 0 0 chr5 65225590 65225651 -134404499 + Tigger5 DNA MER2_type 2263 2323 0 488 158 12 12 chr5 65225651 65225733 -134404417 + Tigger7 DNA MER2_type 2505 2586 -1 207 0 0 0 chr5 65226814 65226837 -134403313 + (TG)n Simple_repeat Simple_repeat 2 24 0 446 292 70 16 chr5 65226862 65227047 -134403103 - MLT1I LTR MaLR -190 219 25 230 239 21 120 chr5 65227251 65227393 -134402757 - MLT1I-int LTR MaLR -209 1162 1035 23 0 0 0 chr5 65227434 65227457 -134402693 + AT_rich Low_complexity Low_complexity 1 23 0 14516 138 30 3 chr5 65227994 65230341 -134399809 + Tigger1 DNA MER2_type 1 2411 -7 247 250 57 11 chr5 65230696 65230784 -134399366 - MLT1I-int LTR MaLR -1642 93 2 495 318 52 66 chr5 65230819 65231124 -134399026 - MLT1I LTR MaLR -29 380 80 3496 53 0 0 chr5 65231660 65232097 -134398053 + L1PA4 LINE L1 5716 6152 -3 31 0 0 0 chr5 65232097 65232128 -134398022 + AT_rich Low_complexity Low_complexity 1 31 0 292 254 36 146 chr5 65232202 65232422 -134397728 - MER117 DNA MER1_type -1 196 1 2031 151 46 6 chr5 65232670 65233021 -134397129 - MER47A DNA MER2_type -1 365 1 1261 232 34 0 chr5 65233298 65233561 -134396589 - MER82 DNA MER2_type 0 653 382 655 202 23 0 chr5 65233559 65233688 -134396462 - MER82 DNA MER2_type -457 196 65 * 22 0 0 0 chr5 65234713 65234735 -134395415 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 65234972 65234994 -134395156 + AT_rich Low_complexity Low_complexity 1 22 0 834 233 85 17 chr5 65235152 65235388 -134394762 + L1M4 LINE L1 3615 3866 -2280 907 290 82 63 chr5 65235681 65236095 -134394055 - MLT1J2 LTR MaLR -12 438 17 574 223 23 0 chr5 65236187 65236317 -134393833 + FLAM_C SINE Alu 5 137 -6 246 406 44 12 chr5 65236637 65236797 -134393353 + L2 LINE L2 2851 3015 -257 370 286 63 32 chr5 65237179 65237368 -134392782 + MLT1K LTR MaLR 387 581 -7 206 267 0 0 chr5 65237369 65237414 -134392736 + L2 LINE L2 3011 3055 -258 319 235 44 0 chr5 65237485 65237553 -134392597 + L2 LINE L2 3233 3303 -10 1124 139 22 0 chr5 65238082 65238262 -134391888 - Tigger4(Zombi) DNA MER2_type 0 2731 2548 5927 119 22 1 chr5 65238270 65239225 -134390925 - L1PA15 LINE L1 -6 6159 5188 330 68 0 0 chr5 65239226 65239270 -134390880 - Tigger4(Zombi) DNA MER2_type -212 2519 2476 * 537 81 233 0 chr5 65239266 65239352 -134390798 - Tigger4(Zombi) DNA MER2_type -2625 106 1 5000 178 98 31 chr5 65239636 65240580 -134389570 - Charlie1 DNA MER1_type -13 2748 1869 2063 112 39 0 chr5 65240580 65240866 -134389284 + AluSq SINE Alu 7 303 -10 5000 178 98 31 chr5 65240866 65241200 -134388950 - Charlie1 DNA MER1_type -892 1869 1559 563 242 83 0 chr5 65241200 65241320 -134388830 - FLAM_A SINE Alu -3 130 1 5000 178 98 31 chr5 65241320 65241415 -134388735 - Charlie1 DNA MER1_type -1202 1559 2 696 225 6 71 chr5 65241967 65242149 -134388001 + MER8 DNA MER2_type 6 175 -64 416 82 0 16 chr5 65242179 65242240 -134387910 - Tigger2 DNA MER2_type -2641 77 18 186 43 0 0 chr5 65242252 65242275 -134387875 + (TG)n Simple_repeat Simple_repeat 2 24 0 1246 123 39 5 chr5 65242288 65242491 -134387659 - Tigger1 DNA MER2_type 0 2418 2209 621 218 14 42 chr5 65242499 65242641 -134387509 - Tigger1 DNA MER2_type -2275 143 6 441 206 0 0 chr5 65242663 65242760 -134387390 + (CA)n Simple_repeat Simple_repeat 2 98 0 1766 193 102 82 chr5 65242760 65242861 -134387289 - MER44D DNA MER2_type -1882 605 508 1868 151 50 25 chr5 65242861 65243218 -134386932 - MER47A DNA MER2_type 0 366 1 1766 193 102 82 chr5 65243218 65243654 -134386496 - MER44D DNA MER2_type -1979 508 2 21 0 0 0 chr5 65243807 65243828 -134386322 + AT_rich Low_complexity Low_complexity 1 21 0 1390 139 4 49 chr5 65244029 65244295 -134385855 + L1MC2 LINE L1 6071 6324 -20 336 208 57 61 chr5 65244434 65244679 -134385471 + L1MC4 LINE L1 7687 8037 -5 957 171 71 0 chr5 65245103 65245273 -134384877 + MER5A DNA MER1_type 6 187 -2 2439 76 0 0 chr5 65245867 65246171 -134383979 + AluY SINE Alu 1 304 -7 8638 101 29 4 chr5 65246174 65247656 -134382494 + L1PA8A LINE L1 4037 5543 -588 213 175 0 0 chr5 65247656 65247696 -134382454 + (TA)n Simple_repeat Simple_repeat 1 40 0 2432 72 36 14 chr5 65247702 65247713 -134382437 + L1PB1 LINE L1 5782 5791 -360 324 0 0 0 chr5 65247713 65247749 -134382401 + (TG)n Simple_repeat Simple_repeat 2 37 0 2432 72 36 14 chr5 65247749 65248098 -134382052 + L1PB1 LINE L1 5791 6150 -1 1775 152 14 3 chr5 65248369 65248652 -134381498 + AluSx SINE Alu 1 286 -26 21 36 0 0 chr5 65248652 65248680 -134381470 + AT_rich Low_complexity Low_complexity 1 28 0 339 244 0 35 chr5 65248828 65248914 -134381236 - MIR SINE MIR -8 254 172 287 174 0 0 chr5 65249020 65249066 -134381084 + MER6 DNA MER2_type 804 849 -16 369 92 215 0 chr5 65249066 65249131 -134381019 - MADE1 DNA Mariner 0 80 2 2832 132 102 42 chr5 65249137 65249667 -134380483 - MER6A DNA MER2_type -43 562 1 286 297 261 14 chr5 65250678 65250900 -134379250 - L3 LINE CR1 -11 1566 1290 5259 199 56 19 chr5 65251744 65253122 -134377028 - L1 LINE L1 -2311 3835 2407 226 222 22 0 chr5 65253133 65253178 -134376972 + GA-rich Low_complexity Low_complexity 3 48 0 1922 172 11 56 chr5 65254425 65254554 -134375596 - MER1B DNA MER1_type -2373 339 206 2117 115 0 10 chr5 65254554 65254850 -134375300 - AluSx SINE Alu 0 312 20 1922 172 11 56 chr5 65254850 65255075 -134375075 - MER1B DNA MER1_type -2506 206 1 183 299 195 0 chr5 65255096 65255173 -134374977 + L2 LINE L2 3169 3260 -12 3738 190 125 29 chr5 65255825 65257373 -134372777 + MER52A LTR ERV1 3 1755 0 230 225 25 38 chr5 65257605 65257685 -134372465 + MIR SINE MIR 119 197 -65 1877 133 36 29 chr5 65258276 65258584 -134371566 - AluSx SINE Alu -2 310 1 2495 239 54 15 chr5 65258968 65259630 -134370520 - MER76 LTR ERV 0 688 1 1047 269 147 18 chr5 65259747 65261118 -134369032 - L1ME3A LINE L1 -219 5951 4408 316 322 125 13 chr5 65261392 65261705 -134368445 - L1MD2 LINE L1 -476 5883 5527 408 306 118 35 chr5 65261796 65262108 -134368042 - L1MD2 LINE L1 -773 5373 5040 1661 168 50 0 chr5 65262125 65262422 -134367728 - AluJb SINE Alu 0 312 1 4999 33 2 3 chr5 65262619 65263220 -134366930 - L1PA3 LINE L1 -1 6154 5555 511 304 72 49 chr5 65263221 65263467 -134366683 - L1ME3A LINE L1 -1821 4325 4086 2441 60 0 3 chr5 65263467 65263765 -134366385 + AluY SINE Alu 1 297 -14 511 304 72 49 chr5 65263765 65263991 -134366159 - L1ME3A LINE L1 -2060 4086 3842 242 244 201 9 chr5 65264159 65264483 -134365667 - L1ME3A LINE L1 -2764 3382 2997 298 221 13 26 chr5 65266011 65266088 -134364062 + CT-rich Low_complexity Low_complexity 4 79 0 331 246 126 59 chr5 65268115 65268473 -134361677 + L1ME LINE L1 1373 1797 -5150 436 237 66 70 chr5 65268500 65268728 -134361422 + L1ME LINE L1 1942 2168 -4789 1253 218 65 19 chr5 65268733 65269145 -134361005 + L1ME LINE L1 2959 3389 -3568 249 223 117 43 chr5 65269832 65269926 -134360224 - MER91C DNA MER1_type -33 107 7 2310 103 7 0 chr5 65270970 65271280 -134358870 - AluSq SINE Alu -1 312 1 674 170 0 0 chr5 65271314 65271426 -134358724 + MER5B DNA MER1_type 52 163 -15 184 298 35 18 chr5 65271483 65271540 -134358610 - L3 LINE CR1 -1 1576 1519 24 67 0 0 chr5 65272719 65272764 -134357386 + AT_rich Low_complexity Low_complexity 1 45 0 19764 37 8 0 chr5 65274045 65277255 -134352895 - L1PA5 LINE L1 -5 6149 2906 7226 240 69 14 chr5 65278329 65280632 -134349518 + L1ME LINE L1 3547 5976 -981 1338 156 16 33 chr5 65280638 65280882 -134349268 + AluJo SINE Alu 58 297 -15 331 164 29 87 chr5 65280890 65280994 -134349156 + L1ME LINE L1 5986 6083 -874 2880 152 84 12 chr5 65281017 65281614 -134348536 + L1MB4 LINE L1 5512 6179 -1 701 235 70 77 chr5 65282741 65283026 -134347124 - MLT1I LTR MaLR -115 294 12 414 271 64 55 chr5 65283026 65283244 -134346906 + L1M4 LINE L1 3344 3563 -2583 7671 17 1 0 chr5 65283252 65284864 -134345286 - L1PA2 LINE L1 -4 6151 4532 2887 31 20 0 chr5 65284864 65285218 -134344932 + L1P LINE L1 3832 4192 -1954 1486 221 75 55 chr5 65285274 65285727 -134344423 - LTR40b LTR ERVL 0 462 1 312 283 27 127 chr5 65285728 65286060 -134344090 + L1M4 LINE L1 3626 3924 -2222 531 170 0 11 chr5 65286506 65286600 -134343550 + MER106B DNA MER1_type 35 127 -932 53 30 0 0 chr5 65286631 65286698 -134343452 + AT_rich Low_complexity Low_complexity 1 67 0 11227 178 30 11 chr5 65286698 65289813 -134340337 - L1PA13 LINE L1 -5 6158 2995 5713 221 51 2 chr5 65289819 65291179 -134338971 - L1PA13 LINE L1 -3201 2945 1520 4173 158 49 4 chr5 65291174 65291967 -134338183 + L1M2 LINE L1 1931 2759 -4090 * 293 155 0 0 chr5 65291960 65292018 -134338132 + L1MA4A LINE L1 6242 6299 -4 * 268 244 0 26 chr5 65292026 65292104 -134338046 + Charlie7 DNA MER1_type 544 619 -1993 311 222 269 9 chr5 65293027 65293135 -134337015 - MIR3 SINE MIR -70 138 3 7515 34 1 0 chr5 65293159 65294079 -134336071 + L1PA3 LINE L1 5235 6155 0 27 29 0 0 chr5 65295312 65295346 -134334804 + AT_rich Low_complexity Low_complexity 1 34 0 25 95 0 0 chr5 65296314 65296388 -134333762 + AT_rich Low_complexity Low_complexity 1 74 0 21 0 0 0 chr5 65296839 65296860 -134333290 + AT_rich Low_complexity Low_complexity 1 21 0 444 226 39 10 chr5 65297576 65297678 -134332472 + MER117 DNA MER1_type 13 117 -80 379 231 33 0 chr5 65298240 65298331 -134331819 - MER5A DNA MER1_type -83 106 13 693 296 61 22 chr5 65299025 65299255 -134330895 - MIR SINE MIR -11 251 13 1696 240 8 14 chr5 65299320 65299682 -134330468 + ERVL LTR ERVL 2885 3244 -2520 1878 137 153 24 chr5 65299849 65300228 -134329922 - MSTA LTR MaLR 0 428 1 1639 145 67 12 chr5 65300228 65300559 -134329591 - MSTA-int LTR MaLR -8 1572 1224 1056 206 103 4 chr5 65300892 65301135 -134329015 - LTR53 LTR ERVL 0 519 253 1186 211 0 8 chr5 65301138 65301384 -134328766 - MLT1A1 LTR MaLR 0 365 122 243 206 116 75 chr5 65302111 65302257 -134327893 + L1M3 LINE L1 5620 5771 -563 206 238 47 35 chr5 65304188 65304360 -134325790 + (CACAA)n Simple_repeat Simple_repeat 5 178 0 2416 206 26 15 chr5 65305956 65306563 -134323587 + L1 LINE L1 4567 5180 -966 250 228 22 43 chr5 65306840 65307024 -134323126 + (CAA)n Simple_repeat Simple_repeat 1 180 0 25 0 0 0 chr5 65307900 65307925 -134322225 + AT_rich Low_complexity Low_complexity 1 25 0 300 229 102 34 chr5 65309294 65309412 -134320738 - L1ME1 LINE L1 -34 6132 6007 771 224 55 109 chr5 65310233 65310563 -134319587 + MLT1A1 LTR MaLR 1 312 -53 1330 106 42 17 chr5 65310563 65310799 -134319351 + L1PB1 LINE L1 5906 6147 -4 222 250 9 35 chr5 65311804 65311920 -134318230 + (CAAA)n Simple_repeat Simple_repeat 2 114 0 21 89 0 0 chr5 65313124 65313180 -134316970 + AT_rich Low_complexity Low_complexity 1 56 0 2014 99 3 7 chr5 65316172 65316455 -134313695 - AluY SINE Alu 0 311 30 227 274 44 49 chr5 65316571 65316621 -134313529 + L1MCa LINE L1 1486 1535 -4891 1255 163 79 14 chr5 65316621 65316898 -134313252 - AluJo SINE Alu -17 295 1 227 274 44 49 chr5 65316898 65317051 -134313099 + L1MCa LINE L1 1535 1688 -4738 998 200 97 77 chr5 65317150 65317495 -134312655 - Charlie6 DNA MER1_type -39 3461 3101 1404 207 104 3 chr5 65317495 65317823 -134312327 + MLT1A1 LTR MaLR 1 361 -4 998 200 97 77 chr5 65317823 65317981 -134312169 - Charlie6 DNA MER1_type -399 3101 2948 200 281 11 22 chr5 65317988 65318077 -134312073 + (CATATA)n Simple_repeat Simple_repeat 5 92 0 305 320 89 15 chr5 65318124 65318327 -134311823 - L1M4c LINE L1 -4543 1841 1624 1359 244 40 38 chr5 65321405 65321803 -134308347 + L1M4b LINE L1 1015 1413 -5446 237 179 0 18 chr5 65321826 65321882 -134308268 + L1M4b LINE L1 1746 1800 -5055 777 193 256 19 chr5 65321988 65322257 -134307893 + L1M4b LINE L1 1869 2201 -4758 1545 124 16 16 chr5 65322258 65322507 -134307643 + AluSx SINE Alu 1 249 -63 6295 151 9 20 chr5 65322653 65323822 -134306328 - L1P LINE L1 -1669 4477 3323 767 250 32 5 chr5 65324089 65324309 -134305841 + Charlie6 DNA MER1_type 3236 3461 -39 361 283 24 44 chr5 65324387 65324564 -134305586 - L1MDb LINE L1 -4601 1859 1680 1438 176 53 14 chr5 65324564 65324848 -134305302 + AluJo SINE Alu 1 295 -17 361 283 24 44 chr5 65324848 65324959 -134305191 - L1MDb LINE L1 -4780 1680 1406 331 339 51 20 chr5 65324968 65325261 -134304889 - L1MDb LINE L1 -4938 1458 1146 1165 155 84 28 chr5 65326675 65326926 -134303224 - MER44D DNA MER2_type -74 535 1 3254 73 2 15 chr5 65327183 65327637 -134302513 - LTR7 LTR ERV1 -2 448 1 2101 68 55 7 chr5 65327803 65328096 -134302054 - AluY SINE Alu -4 307 1 446 291 60 10 chr5 65328662 65328861 -134301289 + L1MEc LINE L1 41 249 -6147 * 1641 252 48 76 chr5 65328857 65330019 -134300131 + L1MEc LINE L1 1218 2347 -4049 1739 248 43 50 chr5 65330030 65330615 -134299535 + L1M4b LINE L1 3 583 -6276 241 155 35 0 chr5 65331483 65331541 -134298609 + (TA)n Simple_repeat Simple_repeat 2 61 0 229 68 45 0 chr5 65331553 65331597 -134298553 + (TG)n Simple_repeat Simple_repeat 1 46 0 6068 96 8 15 chr5 65332279 65333168 -134296982 + L1PA11 LINE L1 5292 6174 0 225 94 0 0 chr5 65333179 65333211 -134296939 + (A)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr5 65333450 65333473 -134296677 + AT_rich Low_complexity Low_complexity 1 23 0 1754 106 62 3 chr5 65334226 65334547 -134295603 + L1MA2 LINE L1 5965 6304 0 680 228 60 0 chr5 65334824 65334991 -134295159 - MER45A DNA AcHobo -1 177 1 580 174 9 52 chr5 65336607 65336722 -134293428 - MLT1A2 LTR MaLR -264 110 1 1458 183 31 24 chr5 65336782 65337071 -134293079 - AluJb SINE Alu -18 294 4 234 128 0 0 chr5 65337512 65337551 -134292599 + (CATA)n Simple_repeat Simple_repeat 2 40 0 8006 141 24 14 chr5 65338830 65339016 -134291134 - L1P LINE L1 -945 5201 5018 2391 81 0 13 chr5 65339016 65339326 -134290824 - AluY SINE Alu -4 307 2 8006 141 24 14 chr5 65339326 65340614 -134289536 - L1P LINE L1 -1128 5018 3712 7109 99 14 3 chr5 65340758 65341837 -134288313 + L1P LINE L1 3631 4721 -1425 210 91 0 0 chr5 65341845 65341878 -134288272 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 608 210 23 45 chr5 65341892 65342068 -134288082 + L1MD3 LINE L1 7106 7277 -718 386 278 78 0 chr5 65342069 65342184 -134287966 + MLT1F1 LTR MaLR 1 124 -443 1453 203 47 19 chr5 65342185 65342545 -134287605 + L1MD3 LINE L1 7404 7773 -222 1876 148 26 34 chr5 65342819 65343197 -134286953 - MLT1B LTR MaLR -13 377 3 331 307 59 13 chr5 65343197 65343330 -134286820 - MLT1J LTR MaLR -371 140 1 285 276 41 24 chr5 65344798 65344921 -134285229 + HAL1 LINE L1 386 510 -1997 1901 252 106 8 chr5 65345100 65345817 -134284333 + L1ME3 LINE L1 5359 6145 -17 933 330 25 8 chr5 65345896 65346260 -134283890 + MLT1I LTR MaLR 17 386 -23 1233 245 33 49 chr5 65346293 65346782 -134283368 + HAL1 LINE L1 1239 1719 -788 270 318 35 41 chr5 65346861 65347124 -134283026 + MLT1J LTR MaLR 97 400 -111 499 280 16 66 chr5 65347314 65347571 -134282579 + HAL1 LINE L1 2243 2486 -21 491 298 54 50 chr5 65348727 65348985 -134281165 - MIR SINE MIR -1 261 3 238 301 108 0 chr5 65349077 65349170 -134280980 + MIR SINE MIR 66 168 -94 234 206 165 41 chr5 65349242 65349339 -134280811 + L2 LINE L2 3173 3281 -32 180 0 0 0 chr5 65350025 65350045 -134280105 + (CA)n Simple_repeat Simple_repeat 1 20 0 696 171 91 6 chr5 65350435 65350610 -134279540 + AluSg/x SINE Alu 86 275 -37 485 343 76 25 chr5 65350695 65350959 -134279191 + L2 LINE L2 2783 3055 -217 1839 149 46 29 chr5 65351823 65352172 -134277978 + THE1B LTR MaLR 9 363 -1 849 119 25 6 chr5 65352360 65352519 -134277631 + GA-rich Low_complexity Low_complexity 1 162 0 1014 174 106 87 chr5 65352944 65353255 -134276895 + THE1B LTR MaLR 39 364 0 10948 99 18 9 chr5 65353255 65354821 -134275329 + THE1B-int LTR MaLR 1 1580 0 2041 130 60 20 chr5 65354823 65355170 -134274980 + THE1B LTR MaLR 3 363 -1 634 320 52 19 chr5 65355693 65355962 -134274188 - MLT1I LTR MaLR -115 294 17 1827 262 103 7 chr5 65356042 65356760 -134273390 - L1ME3 LINE L1 -17 6145 5359 518 284 105 46 chr5 65356941 65357265 -134272885 - HAL1 LINE L1 -1997 510 168 508 114 0 11 chr5 65358546 65358634 -134271516 + L1PB4 LINE L1 6068 6154 -2 2079 163 67 7 chr5 65360109 65360513 -134269637 - MSTA LTR MaLR 0 428 1 189 74 0 0 chr5 65360722 65360749 -134269401 + (CA)n Simple_repeat Simple_repeat 2 28 0 5593 188 22 6 chr5 65361190 65362432 -134267718 - L1 LINE L1 -1101 5045 3784 8845 88 29 8 chr5 65362618 65364619 -134265531 + L1PA5 LINE L1 4123 6149 -5 3029 158 44 16 chr5 65365355 65365971 -134264179 + L1MB1 LINE L1 5553 6185 -4 2062 125 0 0 chr5 65366405 65366757 -134263393 - AluSx SINE Alu 0 354 3 262 343 84 7 chr5 65366915 65367058 -134263092 + MIR SINE MIR 53 206 -56 1083 116 83 0 chr5 65368441 65368657 -134261493 - L1MA2 LINE L1 -106 6198 5965 523 131 40 11 chr5 65369802 65369977 -134260173 + (TA)n Simple_repeat Simple_repeat 1 180 0 636 197 78 16 chr5 65371467 65371660 -134258490 + MLT1B LTR MaLR 173 377 -13 601 294 87 37 chr5 65371671 65371994 -134258156 + MLT1J LTR MaLR 130 468 -43 292 291 43 60 chr5 65374077 65374119 -134256031 - L2 LINE L2 0 3313 3272 1775 201 74 70 chr5 65374119 65374631 -134255519 + MER67D LTR ERV1 1 514 0 292 291 43 60 chr5 65374631 65374705 -134255445 - L2 LINE L2 -41 3272 3199 1954 129 134 0 chr5 65374778 65375120 -134255030 - MSTA LTR MaLR 0 428 41 208 350 49 45 chr5 65375939 65376205 -134253945 + L2 LINE L2 2930 3196 -117 1624 189 55 6 chr5 65376463 65376791 -134253359 + MLT1A1 LTR MaLR 21 364 -1 595 313 73 16 chr5 65377070 65377316 -134252834 + MIR SINE MIR 3 262 0 231 305 41 24 chr5 65377373 65377513 -134252637 - MIR3 SINE MIR -64 144 8 2194 113 3 31 chr5 65377656 65377974 -134252176 - AluSx SINE Alu -3 309 1 502 165 12 0 chr5 65377976 65378061 -134252089 - MIR SINE MIR -111 151 66 2273 93 6 6 chr5 65378889 65379201 -134250949 - AluSp SINE Alu 0 313 2 195 42 0 0 chr5 65379539 65379563 -134250587 + (TA)n Simple_repeat Simple_repeat 1 24 0 337 296 37 52 chr5 65379769 65379904 -134250246 + MLT1K LTR MaLR 102 234 -354 781 233 81 19 chr5 65380166 65380516 -134249634 - LTR25 LTR ERV1 -41 753 417 242 219 141 0 chr5 65380489 65380553 -134249597 - MER51A LTR ERV1 -354 280 208 * 403 140 18 114 chr5 65380692 65380806 -134249344 - MER61E LTR ERV1 -466 103 1 21 36 0 0 chr5 65381202 65381230 -134248920 + AT_rich Low_complexity Low_complexity 1 28 0 17141 135 23 92 chr5 65382263 65386110 -134244040 - L1P LINE L1 -2557 3589 9 881 276 57 6 chr5 65386187 65386553 -134243597 + L1MD2 LINE L1 4709 5093 -1053 6853 132 10 11 chr5 65386572 65387925 -134242225 - L1MA1 LINE L1 0 6302 4953 2449 255 51 31 chr5 65387924 65388960 -134241190 + L1MD2 LINE L1 5078 6132 -227 * 24 53 0 0 chr5 65388980 65389018 -134241132 + AT_rich Low_complexity Low_complexity 1 38 0 501 174 104 0 chr5 65389018 65389133 -134241017 - L1MD3 LINE L1 -959 7036 6910 22 0 0 0 chr5 65389238 65389260 -134240890 + AT_rich Low_complexity Low_complexity 1 22 0 5822 179 24 14 chr5 65439816 65441054 -134189096 + L1 LINE L1 3204 4453 -1693 677 111 0 0 chr5 65441174 65441264 -134188886 - 5S rRNA rRNA -31 90 1 407 165 0 71 chr5 65441343 65441428 -134188722 - Tigger5 DNA MER2_type -3 2320 2242 * 469 207 0 0 chr5 65441418 65441500 -134188650 + Tigger5 DNA MER2_type 2242 2323 0 3210 228 67 21 chr5 65441519 65442518 -134187632 + L1MD2 LINE L1 4359 5403 -743 288 102 18 0 chr5 65442529 65442574 -134187576 + L1MD2 LINE L1 5541 5591 -571 2116 108 23 3 chr5 65442574 65443009 -134187141 - AluSq SINE Alu 0 441 1 868 213 5 35 chr5 65443009 65443206 -134186944 + L1MD2 LINE L1 5582 5772 -470 993 177 6 0 chr5 65443213 65443371 -134186779 + MER44D DNA MER2_type 1 159 -546 811 182 169 86 chr5 65443361 65443663 -134186487 + MER44D DNA MER2_type 223 604 -1 * 1272 189 28 31 chr5 65443664 65443950 -134186200 + L1MD2 LINE L1 5782 6066 -293 * 5540 89 35 19 chr5 65443945 65444234 -134185916 + L1PA11 LINE L1 5336 5619 -555 2386 123 27 0 chr5 65444234 65444599 -134185551 + THE1C LTR MaLR 1 375 0 5540 89 35 19 chr5 65444599 65445129 -134185021 + L1PA11 LINE L1 5619 6168 -6 253 188 62 0 chr5 65445137 65445185 -134184965 - MER6 DNA MER2_type -96 48 -2 200 233 0 0 chr5 65445202 65445245 -134184905 + (TA)n Simple_repeat Simple_repeat 1 43 0 331 328 59 42 chr5 65445249 65445368 -134184782 + L2 LINE L2 3147 3267 -5 25 31 0 0 chr5 65445368 65445400 -134184750 + AT_rich Low_complexity Low_complexity 1 32 0 2289 192 40 8 chr5 65445937 65446462 -134183688 + L1MB8 LINE L1 5633 6174 -4 4460 178 44 18 chr5 65447979 65449809 -134180341 + L1MB8 LINE L1 4307 6178 0 21 71 0 0 chr5 65450273 65450315 -134179835 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr5 65450342 65450366 -134179784 + AT_rich Low_complexity Low_complexity 1 24 0 487 274 76 0 chr5 65450927 65451084 -134179066 - L3b LINE CR1 -115 1468 1300 4010 161 12 6 chr5 65451429 65452102 -134178048 + LTR58 LTR ERV1 3 679 0 16969 120 26 16 chr5 65452634 65456233 -134173917 + L1PA7 LINE L1 10 3692 -2769 6879 90 0 8 chr5 65456241 65458097 -134172053 + L1PA7 LINE L1 4685 6501 0 327 130 0 0 chr5 65458539 65458593 -134171557 + (CA)n Simple_repeat Simple_repeat 1 54 0 695 219 109 34 chr5 65460791 65460849 -134169301 + L1M4 LINE L1 4275 4327 -1819 3575 168 72 15 chr5 65460849 65461514 -134168636 - MER44D DNA MER2_type 0 705 3 695 219 109 34 chr5 65461514 65461720 -134168430 + L1M4 LINE L1 4327 4559 -1587 6041 170 25 30 chr5 65461735 65462770 -134167380 + L1M3f LINE L1 4 1035 -4293 2188 98 3 0 chr5 65462770 65463057 -134167093 + AluSx SINE Alu 1 288 -24 6041 170 25 30 chr5 65463057 65463202 -134166948 + L1M3f LINE L1 1035 1179 -4149 5692 176 42 13 chr5 65463202 65464233 -134165917 + L1M1 LINE L1 13 1073 -6492 1952 141 20 54 chr5 65464408 65464964 -134165186 + MER4A LTR ERV1 34 638 -26 12687 133 30 1 chr5 65464968 65466966 -134163184 + L1M1 LINE L1 1061 3117 -4448 531 216 0 16 chr5 65467004 65467129 -134163021 - L1M4 LINE L1 -3096 3050 2928 * 853 168 71 5 chr5 65467125 65467322 -134162828 + L1M1 LINE L1 4585 4794 -2771 848 179 30 0 chr5 65467320 65467488 -134162662 - L1M4 LINE L1 -3218 2928 2756 * 6775 129 21 10 chr5 65467483 65468246 -134161904 + L1MA3 LINE L1 4792 5545 -2179 10364 160 7 1 chr5 65468246 65471007 -134159143 + L1PA13 LINE L1 3425 6158 -5 6775 129 21 10 chr5 65471007 65472375 -134157775 + L1MA3 LINE L1 5545 7020 -704 243 0 0 0 chr5 65472375 65472402 -134157748 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 6775 129 21 10 chr5 65472402 65472800 -134157350 + L1MA3 LINE L1 7020 7412 -312 2094 127 25 3 chr5 65472800 65473161 -134156989 + L1MA2 LINE L1 5936 6304 0 1907 195 11 26 chr5 65473167 65473235 -134156915 + L1MA4 LINE L1 2404 2472 -5093 2095 135 3 0 chr5 65473235 65473546 -134156604 + AluJb SINE Alu 1 312 0 1907 195 11 26 chr5 65473546 65473943 -134156207 + L1MA4 LINE L1 2472 2862 -4703 13115 190 49 21 chr5 65474071 65478042 -134152108 + L1MA4 LINE L1 3083 6943 -776 1833 175 31 0 chr5 65478042 65478334 -134151816 + AluSx SINE Alu 1 301 -11 13115 190 49 21 chr5 65478334 65478352 -134151798 + L1MA4 LINE L1 6943 6959 -760 333 118 0 0 chr5 65478352 65478403 -134151747 + (TA)n Simple_repeat Simple_repeat 2 52 0 13115 190 49 21 chr5 65478403 65478665 -134151485 + L1MA4 LINE L1 6959 7459 -260 904 191 6 0 chr5 65478665 65478821 -134151329 + L1MC1 LINE L1 6159 6316 -17 2734 300 83 44 chr5 65479076 65480409 -134149741 - L2 LINE L2 -24 3289 1880 346 253 27 40 chr5 65480633 65480783 -134149367 + MER103 DNA DNA 17 164 -2 243 79 0 0 chr5 65481033 65481071 -134149079 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 513 130 140 0 chr5 65481079 65481179 -134148971 - L1MA8 LINE L1 0 6291 6178 * 2368 209 61 6 chr5 65481177 65481847 -134148303 + L1MA7 LINE L1 2739 3445 -2701 2309 164 5 0 chr5 65481955 65482371 -134147779 + L1MA7 LINE L1 4464 4881 -1265 2201 157 8 27 chr5 65482417 65482771 -134147379 + LTR31 LTR ERV1 1 349 -270 2555 101 22 3 chr5 65482771 65482930 -134147220 + THE1C LTR MaLR 1 155 -220 1521 103 0 9 chr5 65482930 65483143 -134147007 - AluSg/x SINE Alu -12 298 88 2555 101 22 3 chr5 65483143 65483351 -134146799 + THE1C LTR MaLR 155 375 0 2201 157 8 27 chr5 65483351 65483371 -134146779 + LTR31 LTR ERV1 349 368 -251 5434 139 26 36 chr5 65484014 65484124 -134146026 + L1MA7 LINE L1 5219 5329 -962 2135 129 0 25 chr5 65484124 65484442 -134145708 + AluSq SINE Alu 1 310 -3 5434 139 26 36 chr5 65484442 65485407 -134144743 + L1MA7 LINE L1 5329 6285 -6 30 27 0 0 chr5 65485407 65485444 -134144706 + AT_rich Low_complexity Low_complexity 1 37 0 849 83 0 0 chr5 65485518 65485627 -134144523 + LTR8 LTR ERV1 547 655 -36 11006 137 24 49 chr5 65485628 65487823 -134142327 + HUERS-P1 LTR ERV1 59 2350 -3913 7749 129 35 24 chr5 65487821 65490112 -134140038 + HUERS-P1 LTR ERV1 3592 6263 0 * 3762 110 11 60 chr5 65490113 65490730 -134139420 + LTR8 LTR ERV1 1 587 -104 198 0 0 0 chr5 65491576 65491598 -134138552 + (A)n Simple_repeat Simple_repeat 1 22 0 704 277 98 44 chr5 65492800 65493118 -134137032 + LTR33 LTR ERVL 1 335 -186 1129 170 53 15 chr5 65493137 65493402 -134136748 - MER33 DNA MER1_type -9 315 41 301 248 33 33 chr5 65493408 65493529 -134136621 + LTR33 LTR ERVL 401 521 0 295 147 53 27 chr5 65493529 65493604 -134136546 + L1ME4a LINE L1 5846 5922 -199 26 0 0 0 chr5 65494549 65494575 -134135575 + AT_rich Low_complexity Low_complexity 1 26 0 547 134 0 0 chr5 65494580 65494677 -134135473 + L1MB4 LINE L1 6084 6180 0 725 313 49 8 chr5 65495037 65495283 -134134867 - MIR SINE MIR 0 262 7 23 33 0 0 chr5 65495330 65495360 -134134790 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 65495701 65495722 -134134428 + AT_rich Low_complexity Low_complexity 1 21 0 24 77 0 0 chr5 65495754 65495806 -134134344 + AT_rich Low_complexity Low_complexity 1 52 0 1499 194 14 38 chr5 65495839 65496132 -134134018 - AluJo SINE Alu -22 290 5 1733 172 3 0 chr5 65497092 65497382 -134132768 + AluJb SINE Alu 1 291 -21 1711 258 34 28 chr5 65498811 65499525 -134130625 + L1ME3 LINE L1 3264 3981 -2165 2408 223 96 50 chr5 65499585 65501025 -134129125 + L1ME3 LINE L1 4643 6156 -6 24 53 0 0 chr5 65501187 65501225 -134128925 + AT_rich Low_complexity Low_complexity 1 38 0 1430 185 67 12 chr5 65501322 65501652 -134128498 - Charlie1 DNA MER1_type -217 2544 2197 483 252 33 60 chr5 65501630 65501781 -134128369 - Charlie1 DNA MER1_type -2612 149 3 * 1274 268 13 13 chr5 65502098 65502601 -134127549 + L2 LINE L2 2657 3153 -160 3147 170 42 4 chr5 65502601 65503124 -134127026 - MER44D DNA MER2_type 0 605 8 481 223 25 89 chr5 65503128 65503285 -134126865 + L2 LINE L2 3159 3305 -8 212 208 0 21 chr5 65503304 65503352 -134126798 + L2 LINE L2 3267 3313 0 7431 189 37 147 chr5 65503384 65505623 -134124527 + L1M1 LINE L1 300 2784 -4578 1754 99 0 4 chr5 65505623 65505856 -134124294 + AluSg/x SINE Alu 72 303 -9 7431 189 37 147 chr5 65505856 65507271 -134122879 + L1M1 LINE L1 2784 4354 -3008 629 240 0 0 chr5 65507271 65507396 -134122754 + FRAM SINE Alu 25 149 -27 7431 189 37 147 chr5 65507396 65509796 -134120354 + L1M1 LINE L1 4354 6634 -728 16244 60 4 6 chr5 65509796 65512491 -134117659 - L1PA7 LINE L1 -164 5990 3297 25 95 0 0 chr5 65513478 65513552 -134116598 + AT_rich Low_complexity Low_complexity 1 74 0 21 0 0 0 chr5 65514003 65514024 -134116126 + AT_rich Low_complexity Low_complexity 1 21 0 446 226 39 10 chr5 65514739 65514841 -134115309 + MER117 DNA MER1_type 13 117 -80 382 231 33 0 chr5 65515403 65515494 -134114656 - MER5A DNA MER1_type -83 106 13 666 293 65 22 chr5 65516188 65516417 -134113733 - MIR SINE MIR -11 251 13 10409 213 83 52 chr5 65516482 65519135 -134111015 + ERVL-F LTR ERVL 2885 5663 -101 306 125 0 0 chr5 65519139 65519187 -134110963 + Ricksha DNA DNA 296 343 -911 397 156 0 0 chr5 65519189 65519253 -134110897 + MLT2F LTR ERVL 1 64 -599 1176 226 95 39 chr5 65519253 65519590 -134110560 - ERVL-F LTR ERVL -3812 1952 1597 1098 164 0 0 chr5 65519590 65519761 -134110389 - AluSg/x SINE Alu -5 307 137 2863 249 72 15 chr5 65519762 65520490 -134109660 - ERVL-F LTR ERVL -4159 1605 829 5442 67 32 8 chr5 65520490 65521238 -134108912 + MER4E LTR ERV1 1 766 0 2863 249 72 15 chr5 65521238 65521292 -134108858 - ERVL-F LTR ERVL -4935 829 779 206 139 25 25 chr5 65521321 65521400 -134108750 + (TA)n Simple_repeat Simple_repeat 1 79 0 1052 174 74 62 chr5 65521400 65521806 -134108344 - MLT2D LTR ERVL -60 404 17 510 270 104 18 chr5 65521826 65521989 -134108161 - ERVL-F LTR ERVL -5065 699 523 522 319 93 9 chr5 65522091 65522423 -134107727 - ERVL-F LTR ERVL -5374 390 31 254 136 0 0 chr5 65522482 65522526 -134107624 - MLT2F LTR ERVL -7 656 613 633 294 82 57 chr5 65522567 65522849 -134107301 - MLT2C1 LTR ERVL -65 332 44 * 789 219 62 22 chr5 65522690 65522868 -134107282 - MLT1E3 LTR MaLR -394 230 46 420 293 20 27 chr5 65522867 65523014 -134107136 - MLT2F LTR ERVL -517 146 1 * 1345 230 35 47 chr5 65523161 65523479 -134106671 - MLT1H1 LTR MaLR 0 555 242 722 139 0 17 chr5 65523512 65523627 -134106523 - FRAM SINE Alu -23 153 41 186 205 0 0 chr5 65523903 65523942 -134106208 + L2 LINE L2 3275 3313 0 465 206 0 0 chr5 65525749 65525856 -134104294 + GA-rich Low_complexity Low_complexity 4 110 0 2403 244 72 76 chr5 65526754 65528652 -134101498 + L1MD2 LINE L1 782 2650 -3756 846 266 39 5 chr5 65528660 65528867 -134101283 - MER58A DNA MER1_type 0 224 11 4798 244 72 33 chr5 65528897 65529916 -134100234 + L1MD2 LINE L1 2661 3639 -2767 2592 44 0 22 chr5 65529916 65530234 -134099916 + AluY SINE Alu 1 311 0 4798 244 72 33 chr5 65530234 65530318 -134099832 + L1MD2 LINE L1 3639 3718 -2688 2017 130 3 3 chr5 65530318 65530632 -134099518 - AluSx SINE Alu 0 314 1 4798 244 72 33 chr5 65530632 65531395 -134098755 + L1MD2 LINE L1 3718 4602 -1804 1521 197 103 6 chr5 65531487 65531837 -134098313 - L1MD2 LINE L1 -177 6182 5799 504 248 28 38 chr5 65531839 65532041 -134098109 + L1MD2 LINE L1 5837 6042 -124 * 2126 211 47 21 chr5 65532035 65532842 -134097308 - L1MD2 LINE L1 -565 5794 4965 4704 253 55 10 chr5 65532847 65534400 -134095750 - L1MD2 LINE L1 -1283 5123 3502 2695 239 71 31 chr5 65534398 65535618 -134094532 + L1MD2 LINE L1 5105 6373 -246 * 526 294 116 20 chr5 65535914 65536217 -134093933 + L1ME LINE L1 5470 5801 -363 * 1906 224 85 19 chr5 65536216 65536841 -134093309 + L1M4 LINE L1 3499 4164 -1982 11430 67 1 9 chr5 65536941 65538426 -134091724 - L1P LINE L1 -4668 1478 7 14898 148 15 106 chr5 65538432 65541808 -134088342 - L1P LINE L1 -3063 3083 12 1328 217 17 0 chr5 65541824 65542124 -134088026 + L1M4 LINE L1 4330 4634 -1512 592 75 0 0 chr5 65542120 65542200 -134087950 - L1P LINE L1 -1920 4226 4147 * 226 132 38 38 chr5 65542218 65542271 -134087879 + L1M4 LINE L1 4582 4634 -1512 * 17834 61 11 2 chr5 65542267 65544640 -134085510 - L1P LINE L1 -1920 4226 1832 43772 41 2 2 chr5 65544650 65550816 -134079334 + L1PA3 LINE L1 9 6167 0 11190 128 22 20 chr5 65550845 65552674 -134077476 - L1P LINE L1 -4304 1842 11 190 369 133 34 chr5 65552894 65553675 -134076475 + L2 LINE L2 2182 3054 -218 240 246 82 0 chr5 65554222 65554283 -134075867 + L2 LINE L2 3157 3222 -50 1723 200 15 24 chr5 65554303 65554713 -134075437 - L1MD3 LINE L1 0 7995 7590 1651 141 29 16 chr5 65554729 65555042 -134075108 - L1MA8 LINE L1 -2 6289 5973 2918 163 11 2 chr5 65555419 65555872 -134074278 - MSTB2 LTR MaLR 0 457 1 3497 249 37 28 chr5 65556280 65557046 -134073104 + L1PA13 LINE L1 1 778 -6009 2502 88 73 6 chr5 65557046 65557387 -134072763 - THE1B LTR MaLR 0 364 1 3497 249 37 28 chr5 65557387 65557517 -134072633 + L1PA13 LINE L1 778 905 -5882 5279 207 34 20 chr5 65557607 65559201 -134070949 + L1PA13 LINE L1 1180 2798 -3999 5869 126 26 11 chr5 65559201 65560154 -134069996 + L1PA15 LINE L1 5200 6165 0 1942 106 53 0 chr5 65560257 65560542 -134069608 - AluY SINE Alu 0 303 5 1527 131 73 4 chr5 65560591 65560851 -134069299 + L1MB4 LINE L1 5902 6179 -1 189 74 0 0 chr5 65560962 65560989 -134069161 + (TGGA)n Simple_repeat Simple_repeat 3 29 0 1809 174 3 0 chr5 65562042 65562335 -134067815 + AluJb SINE Alu 1 294 -18 281 240 80 0 chr5 65562414 65562489 -134067661 - L1ME LINE L1 -394 5727 5647 183 282 0 0 chr5 65562803 65562842 -134067308 + L2 LINE L2 3250 3288 -25 2539 193 2 6 chr5 65562854 65563347 -134066803 - L1MB8 LINE L1 -6 6172 5682 281 308 26 17 chr5 65563624 65563741 -134066409 + L3b LINE CR1 1173 1290 -293 359 285 153 15 chr5 65564193 65564330 -134065820 + L3b LINE CR1 1289 1444 -139 273 312 115 52 chr5 65564858 65565415 -134064735 + L2 LINE L2 1794 2385 -929 1079 271 39 45 chr5 65565682 65566124 -134064026 + L1MC4a LINE L1 5455 5893 -1915 1840 156 7 3 chr5 65566137 65566420 -134063730 + AluJb SINE Alu 14 297 -15 205 339 98 18 chr5 65567345 65567457 -134062693 + L2 LINE L2 2588 2708 -606 189 243 0 0 chr5 65568258 65568295 -134061855 + MIR SINE MIR 218 254 -8 1045 244 45 14 chr5 65568346 65568637 -134061513 - MLT1K LTR MaLR 0 588 289 448 139 13 0 chr5 65568648 65568727 -134061423 - MER116 DNA Mariner 0 80 1 * 536 319 0 19 chr5 65568727 65568867 -134061283 - MLT1K LTR MaLR -317 271 135 991 180 0 0 chr5 65569002 65569169 -134060981 + MER69A DNA AcHobo 10 176 -1 1240 115 0 17 chr5 65570726 65570900 -134059250 + AluSx SINE Alu 1 171 -141 453 248 30 0 chr5 65570913 65571014 -134059136 - MER21B LTR ERV1 -294 569 466 254 111 0 0 chr5 65571063 65571099 -134059051 + Alu SINE Alu 243 278 -23 858 149 0 0 chr5 65571117 65571265 -134058885 + (GGAA)n Simple_repeat Simple_repeat 3 150 0 1624 179 61 0 chr5 65571499 65571778 -134058372 + AluJb SINE Alu 1 296 -16 2331 234 38 27 chr5 65571867 65572537 -134057613 - MER21B LTR ERV1 -111 752 20 23 0 0 0 chr5 65574123 65574146 -134056004 + GC_rich Low_complexity Low_complexity 1 23 0 716 225 0 0 chr5 65577114 65577243 -134052907 - FLAM_A SINE Alu -4 129 1 453 237 118 30 chr5 65577757 65577892 -134052258 - MIR SINE MIR -96 166 20 1531 235 21 13 chr5 65577901 65578280 -134051870 + L1MB7 LINE L1 5803 6184 0 296 262 151 52 chr5 65579287 65579459 -134050691 + MIR SINE MIR 20 208 -54 186 297 23 102 chr5 65579437 65579565 -134050585 - MIR3 SINE MIR -82 126 9 * 202 269 179 0 chr5 65579825 65579892 -134050258 + MIR SINE MIR 1 79 -183 465 266 137 43 chr5 65579942 65580175 -134049975 + MIR SINE MIR 3 257 -5 269 264 14 14 chr5 65580854 65580926 -134049224 + CT-rich Low_complexity Low_complexity 6 77 0 2902 136 28 36 chr5 65581447 65581917 -134048233 - MLT1C LTR MaLR -1 466 1 242 116 23 0 chr5 65583262 65583305 -134046845 + (CA)n Simple_repeat Simple_repeat 1 44 0 34 0 0 0 chr5 65583377 65583411 -134046739 + AT_rich Low_complexity Low_complexity 1 34 0 1072 209 0 23 chr5 65583438 65583658 -134046492 - AluJo SINE Alu -97 215 1 226 311 62 66 chr5 65583857 65584130 -134046020 + L2 LINE L2 2487 2758 -556 933 136 0 20 chr5 65584324 65584471 -134045679 - MER5B DNA MER1_type -1 177 34 926 273 107 58 chr5 65584477 65584964 -134045186 - MLT1J LTR MaLR 0 511 1 695 281 49 70 chr5 65585832 65586177 -134043973 - L2 LINE L2 -46 3267 2930 351 315 41 113 chr5 65586821 65587113 -134043037 - L2 LINE L2 -9 3263 2993 339 314 115 6 chr5 65587612 65587768 -134042382 - MIR SINE MIR -89 173 1 2368 87 3 10 chr5 65588793 65589103 -134041047 - AluSx SINE Alu -4 308 1 484 243 36 92 chr5 65590714 65590965 -134039185 - MER102a DNA MER1_type -9 321 85 200 278 10 52 chr5 65591968 65592065 -134038085 + L3 LINE CR1 1484 1576 -1 24 0 0 0 chr5 65592212 65592236 -134037914 + AT_rich Low_complexity Low_complexity 1 24 0 639 261 28 6 chr5 65593099 65593279 -134036871 - MIR SINE MIR -65 197 14 1074 136 116 41 chr5 65593546 65593788 -134036362 - LOR1a LTR ERV1 0 497 238 642 254 17 23 chr5 65594795 65594972 -134035178 + MER5B DNA MER1_type 3 178 0 249 311 57 33 chr5 65594977 65595099 -134035051 + MIR3 SINE MIR 15 139 -69 315 0 0 0 chr5 65595153 65595188 -134034962 + (A)n Simple_repeat Simple_repeat 1 35 0 227 269 145 27 chr5 65595272 65595458 -134034692 + L1ME4a LINE L1 5866 6073 -48 431 301 24 82 chr5 65595999 65596075 -134034075 + MIR SINE MIR 69 148 -114 2543 71 3 0 chr5 65596075 65596383 -134033767 + AluSx SINE Alu 1 309 -3 431 301 24 82 chr5 65596383 65596512 -134033638 + MIR SINE MIR 148 262 0 1062 184 0 6 chr5 65597059 65597238 -134032912 - MER5B DNA MER1_type 0 178 1 411 338 19 26 chr5 65598006 65598160 -134031990 - MIR SINE MIR -108 154 2 231 114 0 0 chr5 65599134 65599169 -134030981 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 466 295 115 6 chr5 65600979 65601135 -134029015 + MER5B DNA MER1_type 6 178 0 1740 265 146 44 chr5 65601377 65602749 -134027401 - L2 LINE L2 -2 3311 1795 287 57 0 0 chr5 65604602 65604637 -134025513 + U2 snRNA snRNA 2 36 -152 360 68 0 0 chr5 65604716 65604760 -134025390 + MER30 DNA MER1_type 1 44 -186 22 0 0 0 chr5 65605499 65605521 -134024629 + AT_rich Low_complexity Low_complexity 1 22 0 950 183 21 93 chr5 65605590 65605869 -134024281 - L1ME1 LINE L1 -17 6149 5891 284 85 43 0 chr5 65605871 65605918 -134024232 + T-rich Low_complexity Low_complexity 2 50 0 2053 122 3 14 chr5 65605923 65606218 -134023932 - AluSx SINE Alu 0 312 21 411 162 134 128 chr5 65606221 65606400 -134023750 - L1ME1 LINE L1 -264 5902 5723 * 1684 227 29 32 chr5 65606390 65606883 -134023267 - L1ME1 LINE L1 -645 5523 5040 1839 167 27 0 chr5 65606883 65607182 -134022968 + 7SLRNA srpRNA srpRNA 2 308 -12 1684 227 29 32 chr5 65607182 65607372 -134022778 - L1ME1 LINE L1 -1128 5040 4851 300 242 83 76 chr5 65607399 65607556 -134022594 - L1ME4a LINE L1 -30 6091 5934 747 339 68 3 chr5 65608028 65608378 -134021772 - LTR16B LTR ERVL -6 458 86 2741 141 9 7 chr5 65608378 65608798 -134021352 - MSTB LTR MaLR 0 426 6 346 300 76 36 chr5 65608868 65609137 -134021013 - L1ME4a LINE L1 -755 5578 5298 22 0 0 0 chr5 65609249 65609271 -134020879 + AT_rich Low_complexity Low_complexity 1 22 0 376 228 0 0 chr5 65610675 65610754 -134019396 - MLT1K LTR MaLR -5 583 505 860 303 129 85 chr5 65611493 65611773 -134018377 - L2 LINE L2 -1 3271 3005 1784 168 3 10 chr5 65611773 65612076 -134018074 + AluJo SINE Alu 1 301 -11 860 303 129 85 chr5 65612076 65612276 -134017874 - L2 LINE L2 -267 3005 2815 2087 121 0 7 chr5 65612276 65612573 -134017577 + AluSc SINE Alu 1 295 -14 1880 39 8 0 chr5 65612573 65612807 -134017343 + L1PA4 LINE L1 5920 6155 0 860 303 129 85 chr5 65612807 65613327 -134016823 - L2 LINE L2 -457 2815 2319 1582 120 0 0 chr5 65613327 65613565 -134016585 + AluSg/x SINE Alu 73 310 0 404 133 0 0 chr5 65613565 65613625 -134016525 + AluSq/x SINE Alu 88 147 -165 860 303 129 85 chr5 65613625 65614083 -134016067 - L2 LINE L2 -952 2320 1684 2190 213 117 38 chr5 65614162 65614801 -134015349 - L1ME3 LINE L1 -18 6144 5455 2268 108 10 0 chr5 65615883 65616188 -134013962 - AluSx SINE Alu -4 308 1 578 156 0 10 chr5 65616258 65616354 -134013796 - MLT1A2 LTR MaLR -272 102 8 3849 215 66 62 chr5 65616368 65617561 -134012589 - MLT1A2-int LTR MaLR -8 1363 29 1388 203 56 39 chr5 65617561 65617920 -134012230 - MLT1A2 LTR MaLR -6 368 4 3207 42 0 0 chr5 65617964 65618350 -134011800 - L1PA4 LINE L1 -3 6152 5767 22 0 0 0 chr5 65618370 65618392 -134011758 + AT_rich Low_complexity Low_complexity 1 22 0 1904 134 0 0 chr5 65618633 65618910 -134011240 - AluSx SINE Alu -1 311 35 678 122 0 0 chr5 65620129 65620227 -134009923 - FLAM_A SINE Alu -14 128 31 2289 125 3 0 chr5 65620542 65620853 -134009297 - AluSx SINE Alu 0 312 1 225 203 0 0 chr5 65620853 65620901 -134009249 + CT-rich Low_complexity Low_complexity 11 61 0 361 265 200 18 chr5 65620964 65621134 -134009016 + MIR SINE MIR 4 204 -58 560 286 31 15 chr5 65621188 65621384 -134008766 + L1ME LINE L1 79 277 -5842 500 330 71 0 chr5 65621415 65621711 -134008439 + LTR33 LTR ERVL 3 344 -177 267 274 116 21 chr5 65621847 65621942 -134008208 + L1ME LINE L1 332 435 -5684 762 272 60 44 chr5 65622001 65622482 -134007668 + L1ME LINE L1 662 1150 -4969 256 277 27 40 chr5 65622496 65622644 -134007506 + L1ME LINE L1 1336 1481 -4829 309 307 127 20 chr5 65623024 65623174 -134006976 + L1ME LINE L1 5302 5467 -637 674 208 63 0 chr5 65623232 65623391 -134006759 - MER3 DNA MER1_type -87 122 1 554 288 84 23 chr5 65623391 65623700 -134006450 - L1ME LINE L1 -514 5656 5329 396 0 0 0 chr5 65623800 65623844 -134006306 + (CA)n Simple_repeat Simple_repeat 1 44 0 5227 152 30 49 chr5 65625632 65626723 -134003427 + MER11C LTR ERVK 1 1071 0 852 181 114 0 chr5 65627622 65627788 -134002362 + MER5A DNA MER1_type 1 185 -4 258 262 121 27 chr5 65627869 65627927 -134002223 + Charlie7 DNA MER1_type 2449 2500 -112 180 0 0 0 chr5 65627927 65627947 -134002203 + (TA)n Simple_repeat Simple_repeat 1 20 0 258 262 121 27 chr5 65627947 65628037 -134002113 + Charlie7 DNA MER1_type 2500 2611 -1 767 248 50 10 chr5 65628823 65629025 -134001125 + MIR SINE MIR 49 258 -4 469 256 143 48 chr5 65629753 65629921 -134000229 - MIR SINE MIR -56 206 23 272 247 0 45 chr5 65630213 65630302 -133999848 - L2 LINE L2 -1 3271 3187 2593 174 31 0 chr5 65630685 65631138 -133999012 + MLT1C LTR MaLR 1 467 0 464 268 150 42 chr5 65632137 65632431 -133997719 - MER102a DNA MER1_type -8 322 1 411 225 93 8 chr5 65632514 65632643 -133997507 - MIR SINE MIR -55 207 68 205 265 0 0 chr5 65632719 65632768 -133997382 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 29 28 0 0 chr5 65632872 65632908 -133997242 + AT_rich Low_complexity Low_complexity 1 36 0 275 355 21 11 chr5 65633059 65633152 -133996998 - L2 LINE L2 -36 3236 3143 4107 118 3 3 chr5 65633615 65634217 -133995933 - LTR43 LTR ERV1 0 602 1 1547 109 0 5 chr5 65634341 65634561 -133995589 + LTR43 LTR ERV1 112 330 -272 21 0 0 0 chr5 65634731 65634752 -133995398 + AT_rich Low_complexity Low_complexity 1 21 0 229 221 15 0 chr5 65635448 65635516 -133994634 + (TA)n Simple_repeat Simple_repeat 1 69 0 23 92 0 0 chr5 65636166 65636231 -133993919 + AT_rich Low_complexity Low_complexity 1 65 0 445 279 85 18 chr5 65637669 65637834 -133992316 - MIR SINE MIR -59 203 28 2943 213 46 5 chr5 65638332 65639004 -133991146 - L1ME2 LINE L1 -10 6154 5455 3525 40 0 0 chr5 65640204 65640632 -133989518 - L1PA3 LINE L1 -3 6152 5725 651 116 21 0 chr5 65640955 65641050 -133989100 + U6 snRNA snRNA 9 105 -2 1734 100 4 15 chr5 65641055 65641326 -133988824 + L1MA6 LINE L1 6033 6300 0 276 161 0 0 chr5 65641653 65641715 -133988435 + (TG)n Simple_repeat Simple_repeat 2 63 0 634 260 143 39 chr5 65643715 65644150 -133986000 - MLT1K LTR MaLR -28 560 81 2279 80 7 13 chr5 65644540 65644840 -133985310 + AluY SINE Alu 1 298 -13 256 245 0 0 chr5 65645122 65645175 -133984975 + (CA)n Simple_repeat Simple_repeat 2 54 0 398 303 191 13 chr5 65645772 65645924 -133984226 + MER5A DNA MER1_type 10 188 -1 515 259 17 26 chr5 65646196 65646312 -133983838 + MER5A DNA MER1_type 1 115 -74 2376 107 0 0 chr5 65646647 65646957 -133983193 + AluSg SINE Alu 1 310 0 239 203 14 14 chr5 65647943 65648017 -133982133 + (TA)n Simple_repeat Simple_repeat 2 75 0 1905 154 3 0 chr5 65648315 65648600 -133981550 + AluJb SINE Alu 1 286 -26 287 278 56 0 chr5 65650399 65650489 -133979661 - L2 LINE L2 0 3313 3219 2102 106 0 3 chr5 65650490 65650773 -133979377 + AluSx SINE Alu 1 282 -30 220 186 34 17 chr5 65650832 65650891 -133979259 + GA-rich Low_complexity Low_complexity 2 61 0 364 343 42 24 chr5 65650891 65651104 -133979046 - L2 LINE L2 -121 3192 2976 395 242 212 0 chr5 65651302 65651434 -133978716 - MIR SINE MIR -23 239 80 237 330 11 0 chr5 65652813 65652904 -133977246 + GA-rich Low_complexity Low_complexity 2 93 0 380 304 110 99 chr5 65653687 65654141 -133976009 + L2 LINE L2 2814 3272 0 532 254 14 30 chr5 65654309 65654603 -133975547 - MLT1J2 LTR MaLR 0 450 83 317 279 145 46 chr5 65655335 65655597 -133974553 + HAL1 LINE L1 826 1113 -1394 1895 221 74 10 chr5 65655603 65656091 -133974059 + LTR40a LTR ERVL 1 519 0 233 251 126 27 chr5 65656126 65656309 -133973841 + HAL1 LINE L1 1109 1309 -1198 21 57 0 0 chr5 65656313 65656348 -133973802 + AT_rich Low_complexity Low_complexity 1 35 0 1858 152 10 10 chr5 65656403 65656700 -133973450 + AluSx SINE Alu 6 302 -10 1142 228 45 66 chr5 65656701 65657036 -133973114 + L1MC4 LINE L1 7305 7629 -413 1734 166 38 7 chr5 65657036 65657325 -133972825 + AluJo SINE Alu 1 298 -14 1142 228 45 66 chr5 65657325 65657458 -133972692 + L1MC4 LINE L1 7629 7763 -279 486 330 48 48 chr5 65657514 65657615 -133972535 + HAL1 LINE L1 1525 1625 -882 186 43 0 0 chr5 65657615 65657638 -133972512 + (GA)n Simple_repeat Simple_repeat 2 24 0 486 330 48 48 chr5 65657638 65657851 -133972299 + HAL1 LINE L1 1624 1839 -668 390 297 105 7 chr5 65658118 65658404 -133971746 + L1MC/D LINE L1 4741 5054 -1092 433 284 111 10 chr5 65658458 65658666 -133971484 + L1MC/D LINE L1 5161 5389 -757 350 44 0 0 chr5 65658671 65658716 -133971434 + L1PA13 LINE L1 6100 6144 -19 592 279 22 48 chr5 65658724 65659036 -133971114 + L1MC/D LINE L1 5354 5661 -460 258 364 0 0 chr5 65659221 65659320 -133970830 - L2 LINE L2 -17 3296 3198 377 273 98 27 chr5 65660984 65661167 -133968983 + L2 LINE L2 3118 3313 0 26 0 0 0 chr5 65662919 65662945 -133967205 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 65663143 65663165 -133966985 + AT_rich Low_complexity Low_complexity 1 22 0 501 229 137 33 chr5 65663715 65663868 -133966282 + MER5B DNA MER1_type 4 172 -6 1512 168 56 3 chr5 65664996 65665281 -133964869 + L1PB4 LINE L1 5850 6149 -7 795 232 60 43 chr5 65666168 65666401 -133963749 - MIR SINE MIR -3 259 23 258 272 48 87 chr5 65666450 65666553 -133963597 + L2 LINE L2 3207 3305 -8 180 0 0 0 chr5 65666780 65666800 -133963350 + (GGA)n Simple_repeat Simple_repeat 2 21 0 699 308 40 8 chr5 65667108 65667355 -133962795 + MIR SINE MIR 8 262 0 29 60 0 0 chr5 65667860 65667910 -133962240 + AT_rich Low_complexity Low_complexity 1 50 0 227 310 0 0 chr5 65669891 65669949 -133960201 - L2 LINE L2 -10 3262 3205 204 246 82 16 chr5 65669996 65670057 -133960093 - MER5B DNA MER1_type -25 153 89 205 316 76 25 chr5 65670236 65670394 -133959756 - L2 LINE L2 -219 3053 2888 180 200 22 0 chr5 65670508 65670553 -133959597 - L2 LINE L2 -672 2642 2597 248 299 254 35 chr5 65670601 65671220 -133958930 - L2 LINE L2 -815 2499 1746 204 298 0 64 chr5 65671804 65671898 -133958252 + L2 LINE L2 3200 3287 -26 1014 133 50 0 chr5 65671906 65672086 -133958064 + MER5A DNA MER1_type 1 189 0 767 181 0 15 chr5 65672272 65672405 -133957745 + FLAM_C SINE Alu 1 131 -12 479 161 65 0 chr5 65672762 65672855 -133957295 + MER5A DNA MER1_type 1 99 -90 622 171 6 23 chr5 65673246 65673422 -133956728 + (TA)n Simple_repeat Simple_repeat 1 173 0 207 0 0 0 chr5 65673422 65673445 -133956705 + (GA)n Simple_repeat Simple_repeat 2 24 0 3704 116 11 67 chr5 65674640 65675286 -133954864 - MER4B LTR ERV1 0 610 1 414 303 98 60 chr5 65675937 65676171 -133953979 - MIR SINE MIR 0 262 20 965 212 32 23 chr5 65676237 65676454 -133953696 + MER20 DNA MER1_type 1 219 0 384 154 26 0 chr5 65678113 65678191 -133951959 + MER116 DNA Mariner 1 80 0 233 287 140 37 chr5 65678758 65678922 -133951228 - L3b LINE CR1 -197 1386 1206 221 326 32 0 chr5 65679001 65679096 -133951054 - L3b LINE CR1 -384 1199 1102 351 170 117 0 chr5 65679471 65679565 -133950585 - L1ME4a LINE L1 0 6121 6017 330 320 96 59 chr5 65680242 65680682 -133949468 + L1ME4a LINE L1 4795 5250 -896 414 326 65 0 chr5 65680791 65680929 -133949221 + L2 LINE L2 3154 3300 -13 188 67 33 0 chr5 65680929 65680959 -133949191 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 684 263 122 59 chr5 65680981 65681729 -133948421 + L1ME4a LINE L1 5303 6097 -24 889 171 50 39 chr5 65681762 65682020 -133948130 + L1ME4a LINE L1 5855 6115 -6 228 317 0 12 chr5 65682196 65682278 -133947872 + GA-rich Low_complexity Low_complexity 2 82 0 300 53 0 0 chr5 65682441 65682479 -133947671 + (CA)n Simple_repeat Simple_repeat 2 39 0 664 281 96 26 chr5 65682657 65682960 -133947190 + MLT1J LTR MaLR 14 337 -174 993 229 105 34 chr5 65682968 65683435 -133946715 - LTR24B LTR ERV1 -7 569 70 253 191 45 22 chr5 65683481 65683570 -133946580 - LTR24B LTR ERV1 -416 160 70 317 159 63 0 chr5 65683769 65683832 -133946318 + MIR SINE MIR 104 170 -92 378 238 50 33 chr5 65683934 65684115 -133946035 + L1ME3A LINE L1 4882 5065 -1081 959 271 23 40 chr5 65684155 65684509 -133945641 + L1ME3A LINE L1 5562 5909 -261 232 289 36 0 chr5 65684513 65684596 -133945554 - LTR16A1 LTR ERVL -371 86 1 273 241 99 49 chr5 65684640 65684802 -133945348 - HERV16 LTR ERVL -25 4971 4802 440 280 40 46 chr5 65685624 65685757 -133944393 - HERV16 LTR ERVL -1348 4306 4173 2431 182 25 47 chr5 65685757 65686273 -133943877 - MLT1D LTR MaLR 0 505 1 440 280 40 46 chr5 65686273 65686314 -133943836 - HERV16 LTR ERVL -1481 4173 4133 * 1008 280 32 86 chr5 65686311 65686936 -133943214 - HERV16 LTR ERVL -2345 3309 2719 21 0 0 0 chr5 65687509 65687530 -133942620 + AT_rich Low_complexity Low_complexity 1 21 0 649 300 64 26 chr5 65687587 65688295 -133941855 - HERV16 LTR ERVL -2692 2304 1720 2125 315 86 36 chr5 65688351 65689530 -133940620 - HERV16 LTR ERVL -3429 1567 331 298 181 12 84 chr5 65689843 65689926 -133940224 - LTR16A1 LTR ERVL 0 457 381 499 247 98 89 chr5 65689961 65690297 -133939853 - LTR16A1 LTR ERVL -118 339 1 791 265 75 12 chr5 65690310 65690563 -133939587 + L2 LINE L2 3041 3309 -4 1739 166 3 45 chr5 65691259 65691567 -133938583 - AluJb SINE Alu -17 295 1 195 42 0 0 chr5 65691575 65691599 -133938551 + (T)n Simple_repeat Simple_repeat 1 24 0 366 230 22 44 chr5 65692344 65692479 -133937671 + HAL1 LINE L1 799 930 -1577 730 31 21 0 chr5 65692655 65692752 -133937398 + (TAGA)n Simple_repeat Simple_repeat 2 100 0 1787 211 27 89 chr5 65692780 65693132 -133937018 + L1MB8 LINE L1 3806 4089 -2057 3025 181 51 16 chr5 65693132 65693804 -133936346 + L1MB8 LINE L1 5479 6173 -5 1787 211 27 89 chr5 65693804 65694191 -133935959 + L1MB8 LINE L1 4089 4499 -1647 * 4822 213 55 36 chr5 65694188 65695553 -133934597 + L1MC/D LINE L1 3777 5181 -1037 2127 131 13 3 chr5 65695553 65695851 -133934299 + AluSx SINE Alu 1 301 -11 4822 213 55 36 chr5 65695851 65696143 -133934007 + L1MC/D LINE L1 5181 5466 -752 1158 179 81 90 chr5 65696469 65696815 -133933335 + MER2 DNA MER2_type 1 343 -1 740 289 80 7 chr5 65696990 65697432 -133932718 + LTR33 LTR ERVL 2 502 -19 281 287 117 0 chr5 65697505 65697599 -133932551 - L2 LINE L2 0 3313 3209 2362 261 116 117 chr5 65697610 65698643 -133931507 - L2 LINE L2 -253 3060 2026 2229 120 0 0 chr5 65698643 65698943 -133931207 + AluSx SINE Alu 1 300 -12 2362 261 116 117 chr5 65698943 65699833 -133930317 - L2 LINE L2 -1287 2026 1136 1783 223 70 63 chr5 65700064 65700171 -133929979 - L1ME3 LINE L1 -9 6153 6048 1991 130 39 0 chr5 65700171 65700184 -133929966 - AluSx SINE Alu -17 295 284 207 0 0 0 chr5 65700184 65700207 -133929943 + (GA)n Simple_repeat Simple_repeat 1 23 0 1991 130 39 0 chr5 65700207 65700477 -133929673 - AluSx SINE Alu -28 284 1 1783 223 70 63 chr5 65700477 65701097 -133929053 - L1ME3 LINE L1 -114 6048 5421 2857 119 50 4 chr5 65701346 65701808 -133928342 - MER31A LTR ERV1 0 485 3 627 159 0 0 chr5 65703175 65703282 -133926868 - MER81 DNA DNA 0 114 8 1833 168 14 0 chr5 65707758 65708043 -133922107 + AluJb SINE Alu 1 289 -23 440 234 50 75 chr5 65708523 65708553 -133921597 + HAL1 LINE L1 2312 2341 -166 2432 92 0 0 chr5 65708553 65708858 -133921292 + AluY SINE Alu 1 305 -6 279 0 0 0 chr5 65708858 65708889 -133921261 + (TA)n Simple_repeat Simple_repeat 2 32 0 440 234 50 75 chr5 65708889 65709058 -133921092 + HAL1 LINE L1 2339 2507 0 278 278 51 74 chr5 65709072 65709248 -133920902 - HAL1 LINE L1 -1682 825 654 1850 144 7 7 chr5 65709397 65709712 -133920438 + AluSx SINE Alu 1 315 0 772 293 71 56 chr5 65710022 65710278 -133919872 + LTR33 LTR ERVL 140 404 -117 1646 196 67 12 chr5 65710278 65710624 -133919526 - MLT1A1 LTR MaLR 0 365 1 772 293 71 56 chr5 65710624 65710705 -133919445 + LTR33 LTR ERVL 404 482 -39 749 269 117 18 chr5 65711463 65711686 -133918464 + MIR SINE MIR 17 261 -1 2535 57 0 0 chr5 65711778 65712075 -133918075 + AluY SINE Alu 1 297 -14 216 97 0 0 chr5 65712475 65712506 -133917644 + (A)n Simple_repeat Simple_repeat 1 31 0 228 35 0 0 chr5 65712613 65712642 -133917508 + (TG)n Simple_repeat Simple_repeat 1 29 0 1410 256 39 50 chr5 65713495 65713953 -133916197 - LTR16A1 LTR ERVL -4 453 1 1794 256 110 85 chr5 65715577 65716826 -133913324 + L1MC4 LINE L1 6763 8042 0 3451 197 6 21 chr5 65716873 65717547 -133912603 + MSTB-int LTR MaLR 498 1161 -490 2208 145 47 33 chr5 65717548 65718092 -133912058 - MLT2A2 LTR ERVL 0 554 3 2482 186 44 17 chr5 65718101 65718575 -133911575 + MSTB-int LTR MaLR 1165 1651 0 2571 159 26 14 chr5 65718575 65718996 -133911154 + MSTB LTR MaLR 1 426 0 826 196 0 0 chr5 65719010 65719143 -133911007 - FLAM_C SINE Alu -10 133 1 369 250 75 2 chr5 65719259 65719409 -133910741 + MLT1F1 LTR MaLR 3 196 -371 715 217 22 49 chr5 65719411 65719595 -133910555 + MLT1F1 LTR MaLR 379 557 -10 777 248 41 20 chr5 65719623 65719869 -133910281 + L1ME4a LINE L1 5575 5825 -296 369 182 0 0 chr5 65719868 65719923 -133910227 - HAL1 LINE L1 -1653 854 800 * 1831 160 7 20 chr5 65719925 65720029 -133910121 + AluJb SINE Alu 11 115 -197 2512 130 3 35 chr5 65720029 65720405 -133909745 - THE1B LTR MaLR 0 364 1 1831 160 7 20 chr5 65720405 65720606 -133909544 + AluJb SINE Alu 115 312 0 383 329 43 43 chr5 65720610 65720865 -133909285 - HAL1 LINE L1 -1696 811 557 1996 148 101 6 chr5 65720910 65721248 -133908902 + MSTB LTR MaLR 53 422 -4 237 208 83 0 chr5 65721515 65721587 -133908563 + MLT1G1 LTR MaLR 509 586 -9 270 260 119 57 chr5 65721596 65721773 -133908377 - HAL1 LINE L1 -2078 429 242 483 196 43 0 chr5 65721778 65721870 -133908280 - MLT1D LTR MaLR -394 111 16 479 156 0 13 chr5 65722190 65722267 -133907883 + MLT1I LTR MaLR 1 76 -333 972 195 47 0 chr5 65722271 65722437 -133907713 - MLT1D LTR MaLR 0 505 331 940 221 20 55 chr5 65722437 65722853 -133907297 - MLT1A1 LTR MaLR 0 365 21 306 206 0 48 chr5 65722863 65722926 -133907224 - MLT1D LTR MaLR -162 343 284 * 340 190 0 0 chr5 65722923 65722981 -133907169 - MLT1A1 LTR MaLR -287 78 21 307 167 0 50 chr5 65722994 65723054 -133907096 - MLT1D LTR MaLR -165 340 284 * 352 190 0 0 chr5 65723051 65723109 -133907041 - MLT1A1 LTR MaLR -287 78 21 1211 222 12 64 chr5 65723119 65723448 -133906702 - MLT1D LTR MaLR -162 343 32 2120 109 3 0 chr5 65723448 65723768 -133906382 - AluSx SINE Alu 0 321 1 2069 104 4 4 chr5 65723992 65724299 -133905851 - AluSc SINE Alu 0 307 1 21 71 0 0 chr5 65724366 65724408 -133905742 + AT_rich Low_complexity Low_complexity 1 42 0 473 311 103 30 chr5 65724520 65724806 -133905344 - HAL1b LINE L1 -741 1669 308 357 259 57 138 chr5 65724813 65725110 -133905040 - HAL1 LINE L1 -1165 1342 1070 325 322 57 22 chr5 65725854 65726084 -133904066 - L1ME LINE L1 -511 5610 5373 279 0 0 0 chr5 65726713 65726744 -133903406 + (A)n Simple_repeat Simple_repeat 1 31 0 225 340 0 21 chr5 65728307 65728401 -133901749 + GA-rich Low_complexity Low_complexity 2 93 0 328 301 52 66 chr5 65728522 65728658 -133901492 - L2 LINE L2 -2 3270 3137 3983 240 63 22 chr5 65728722 65729433 -133900717 + L2 LINE L2 1805 2485 -828 1862 121 82 7 chr5 65729433 65729714 -133900436 + AluSx SINE Alu 1 302 -10 3983 240 63 22 chr5 65729714 65730453 -133899697 + L2 LINE L2 2485 3313 0 199 250 71 83 chr5 65730451 65730535 -133899615 - L2 LINE L2 0 3272 3190 * 190 295 16 0 chr5 65730671 65730732 -133899418 - L2 LINE L2 -559 2755 2694 2293 114 0 0 chr5 65730740 65731038 -133899112 + AluSx SINE Alu 1 298 -14 492 199 55 89 chr5 65731556 65731702 -133898448 + MER5B DNA MER1_type 1 141 -37 369 293 8 23 chr5 65733499 65733632 -133896518 - MLT1I LTR MaLR -198 211 81 1226 235 139 18 chr5 65733897 65734352 -133895798 + MLT1F1 LTR MaLR 3 512 -55 235 245 0 0 chr5 65735002 65735051 -133895099 + L2 LINE L2 3223 3271 -1 204 54 36 71 chr5 65735665 65735721 -133894429 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 240 264 57 0 chr5 65735829 65735882 -133894268 - LTR16A LTR ERVL -137 313 258 1357 194 0 8 chr5 65735891 65736133 -133894017 + MLT2D LTR ERVL 1 240 -174 2701 90 62 3 chr5 65736161 65736515 -133893635 + THE1C LTR MaLR 1 375 0 264 331 16 33 chr5 65736579 65736700 -133893450 - LTR16B LTR ERVL -309 155 37 1155 281 39 18 chr5 65736868 65737202 -133892948 + MLT2F LTR ERVL 1 341 -322 2170 193 127 4 chr5 65737202 65737242 -133892908 - MLT2B1 LTR ERVL 0 520 486 629 47 12 0 chr5 65737242 65737327 -133892823 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 2170 193 127 4 chr5 65737327 65737743 -133892407 - MLT2B1 LTR ERVL -34 486 8 1456 209 18 33 chr5 65737751 65738082 -133892068 + MLT2F LTR ERVL 338 663 0 441 324 34 0 chr5 65738182 65738361 -133891789 - MER117 DNA MER1_type -2 195 11 521 191 29 19 chr5 65738545 65738650 -133891500 + MLT1C LTR MaLR 1 106 -399 1108 187 132 0 chr5 65738655 65738890 -133891260 - AluJo SINE Alu -18 294 29 967 216 40 95 chr5 65738897 65739086 -133891064 + MLT1C LTR MaLR 110 269 -198 2899 207 12 8 chr5 65739086 65739603 -133890547 - LTR53 LTR ERVL 0 519 1 967 216 40 95 chr5 65739603 65739792 -133890358 + MLT1C LTR MaLR 269 467 0 2030 80 109 0 chr5 65740841 65741116 -133889034 + AluSg SINE Alu 1 305 -5 450 163 0 0 chr5 65741164 65741244 -133888906 - L1MB8 LINE L1 0 6178 6099 583 269 179 4 chr5 65741666 65741882 -133888268 + HAL1 LINE L1 640 913 -1594 304 59 39 0 chr5 65741882 65741933 -133888217 + (CA)n Simple_repeat Simple_repeat 2 54 0 583 269 179 4 chr5 65741933 65741984 -133888166 + HAL1 LINE L1 913 954 -1553 39 38 0 0 chr5 65742034 65742087 -133888063 + AT_rich Low_complexity Low_complexity 1 53 0 2156 85 3 39 chr5 65742724 65743031 -133887119 - AluSc SINE Alu -13 296 1 389 218 48 133 chr5 65743355 65743603 -133886547 + HAL1 LINE L1 2281 2507 0 462 224 33 105 chr5 65743741 65743978 -133886172 - FLAM_A SINE Alu 0 226 1 1518 75 0 35 chr5 65744011 65744211 -133885939 + MER107 DNA MER1_type 5 197 0 2604 48 0 0 chr5 65744328 65744639 -133885511 - AluY SINE Alu 0 311 1 3113 137 32 40 chr5 65747793 65748317 -133881833 - MLT2B1 LTR ERVL 0 520 1 2282 217 68 28 chr5 65748672 65749470 -133880680 - MER97a DNA MER1_type? 0 894 25 21 36 0 0 chr5 65749782 65749810 -133880340 + AT_rich Low_complexity Low_complexity 1 28 0 2205 107 10 3 chr5 65750331 65750640 -133879510 + AluSp SINE Alu 1 311 -2 378 143 0 0 chr5 65750640 65750703 -133879447 + (GA)n Simple_repeat Simple_repeat 1 63 0 948 86 34 17 chr5 65750705 65750880 -133879270 + GA-rich Low_complexity Low_complexity 3 180 0 1907 158 117 17 chr5 65751233 65751593 -133878557 - MSTD LTR MaLR 0 396 1 912 155 0 0 chr5 65752645 65752774 -133877376 - FLAM_A SINE Alu -4 129 1 787 271 35 16 chr5 65752973 65753228 -133876922 + MIR SINE MIR 1 260 -2 485 311 101 9 chr5 65753791 65754010 -133876140 - MLT1L LTR MaLR -7 608 370 2460 213 111 25 chr5 65755259 65755358 -133874792 - MER20B DNA MER1_type -5 778 689 2130 151 10 77 chr5 65755358 65755776 -133874374 + MLT1B LTR MaLR 1 390 0 2460 213 111 25 chr5 65755776 65756382 -133873768 - MER20B DNA MER1_type -94 689 13 1293 161 91 12 chr5 65756699 65756953 -133873197 + L1MEc LINE L1 538 811 -5585 361 328 138 55 chr5 65757837 65758163 -133871987 - L1M2 LINE L1 -5849 1000 648 252 0 0 0 chr5 65758760 65758788 -133871362 + (TG)n Simple_repeat Simple_repeat 2 29 0 2520 66 0 0 chr5 65760389 65760692 -133869458 - AluY SINE Alu -8 303 1 2121 111 3 3 chr5 65762387 65762684 -133867466 + AluSx SINE Alu 1 297 -15 7764 56 126 40 chr5 65763409 65764571 -133865579 + MER11A LTR ERVK 1 1262 -4 241 265 73 15 chr5 65765546 65765614 -133864536 - MER5A DNA MER1_type -2 187 116 1034 263 146 16 chr5 65765627 65766235 -133863915 + L2 LINE L2 2629 3306 -7 200 260 0 0 chr5 65766305 65766355 -133863795 - L2 LINE L2 -7 3265 3216 1859 142 49 52 chr5 65767683 65767809 -133862341 + MER2 DNA MER2_type 1 126 -219 1895 141 3 11 chr5 65767809 65768117 -133862033 - AluSx SINE Alu 0 306 1 1859 142 49 52 chr5 65768117 65768135 -133862015 + MER2 DNA MER2_type 126 143 -202 2076 166 9 9 chr5 65768135 65768472 -133861678 - MER1B DNA MER1_type 0 337 1 1859 142 49 52 chr5 65768472 65768670 -133861480 + MER2 DNA MER2_type 143 344 -1 2307 89 3 0 chr5 65769611 65769904 -133860246 - AluSp SINE Alu -19 294 1 538 286 64 43 chr5 65770091 65770574 -133859576 - L1M4 LINE L1 -1095 5051 4559 269 109 87 0 chr5 65770874 65770920 -133859230 - MADE1 DNA Mariner 0 80 31 24 32 0 0 chr5 65772012 65772043 -133858107 + AT_rich Low_complexity Low_complexity 1 31 0 2549 79 43 72 chr5 65773100 65773281 -133856869 - MER4A LTR ERV1 0 664 479 1837 151 7 7 chr5 65773281 65773566 -133856584 + AluSx SINE Alu 1 285 -27 2549 79 43 72 chr5 65773566 65773800 -133856350 - MER4A LTR ERV1 -185 479 261 661 96 0 48 chr5 65773800 65773904 -133856246 - MER4A LTR ERV1 -565 99 1 11768 121 58 18 chr5 65773910 65774647 -133855503 - MER4A-int LTR ERV1 -2 6596 5890 207 0 0 0 chr5 65774647 65774670 -133855480 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 11768 121 58 18 chr5 65774670 65776025 -133854125 - MER4A-int LTR ERV1 -708 5890 4421 11174 29 4 1 chr5 65776437 65778548 -133851602 - L1PA2 LINE L1 0 6155 4043 36280 38 29 2 chr5 65778654 65783136 -133847014 - L1P LINE L1 -1540 4606 3 260 231 56 65 chr5 65783795 65783903 -133846247 - L1ME LINE L1 -220 5901 5795 279 254 120 21 chr5 65783922 65784064 -133846086 - L1ME LINE L1 -363 5758 5603 893 249 256 30 chr5 65784406 65785146 -133845004 - L2 LINE L2 0 3313 2414 383 233 248 0 chr5 65785167 65785300 -133844850 - L2 LINE L2 -1255 2059 1894 283 150 0 0 chr5 65786949 65786989 -133843161 - 5S rRNA rRNA -79 42 3 827 141 96 34 chr5 65787156 65787333 -133842817 + MER3 DNA MER1_type 12 199 -10 2292 98 0 0 chr5 65788584 65788879 -133841271 - AluSx SINE Alu -17 295 1 739 355 59 40 chr5 65788989 65789415 -133840735 + L2 LINE L2 2837 3270 -2 437 259 52 37 chr5 65789930 65790065 -133840085 - MIR3 SINE MIR -9 199 63 26 0 0 0 chr5 65790520 65790546 -133839604 + AT_rich Low_complexity Low_complexity 1 26 0 234 88 0 0 chr5 65790559 65790593 -133839557 - HY3 scRNA scRNA -1 100 67 225 270 0 0 chr5 65792498 65792609 -133837541 + T-rich Low_complexity Low_complexity 1 111 0 210 171 0 0 chr5 65794176 65794211 -133835939 + A-rich Low_complexity Low_complexity 1 35 0 2217 92 9 28 chr5 65794757 65795074 -133835076 - AluSq SINE Alu -2 311 1 2089 79 0 4 chr5 65795234 65795501 -133834649 + AluY SINE Alu 38 303 -8 1740 126 65 0 chr5 65795505 65795834 -133834316 - MER47A DNA MER2_type 0 366 1 222 37 0 0 chr5 65796431 65796458 -133833692 + (TA)n Simple_repeat Simple_repeat 1 27 0 1496 165 58 55 chr5 65796458 65796749 -133833401 - AluJo SINE Alu -18 294 3 27 62 0 0 chr5 65796908 65796956 -133833194 + AT_rich Low_complexity Low_complexity 1 48 0 256 282 0 0 chr5 65797011 65797082 -133833068 + T-rich Low_complexity Low_complexity 1 71 0 1308 84 17 6 chr5 65797815 65797994 -133832156 + AluSq SINE Alu 1 181 -132 449 262 104 43 chr5 65798076 65798240 -133831910 - L2 LINE L2 -1 3271 3098 185 257 34 200 chr5 65798234 65798499 -133831651 - L2 LINE L2 -339 2975 2755 * 1614 319 211 18 chr5 65798622 65800173 -133829977 - L2 LINE L2 -821 2493 644 1446 175 4 34 chr5 65800174 65800443 -133829707 + AluJo SINE Alu 39 299 -13 2924 234 80 15 chr5 65801220 65802227 -133827923 + L1MD1 LINE L1 4205 5277 -869 219 261 0 0 chr5 65802254 65802300 -133827850 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 3036 192 111 11 chr5 65802325 65803107 -133827043 + L1MD1 LINE L1 5383 6242 0 285 156 312 0 chr5 65803102 65803179 -133826971 - L1M4 LINE L1 -1286 4860 4760 * 5287 244 95 43 chr5 65803281 65805446 -133824704 - L1M4 LINE L1 -1411 4735 2442 2225 114 0 3 chr5 65805446 65805744 -133824406 - AluSx SINE Alu -15 297 1 5287 244 95 43 chr5 65805744 65805883 -133824267 - L1M4 LINE L1 -3704 2442 2312 4220 214 48 30 chr5 65806084 65807344 -133822806 + L1 LINE L1 2647 3929 -2217 2283 203 30 0 chr5 65807350 65807817 -133822333 + L1 LINE L1 4519 4999 -1147 1181 234 31 26 chr5 65807818 65808168 -133821982 - HAL1 LINE L1 -860 1647 1296 1837 242 85 10 chr5 65808260 65808743 -133821407 - HAL1 LINE L1 -1986 521 3 213 286 48 79 chr5 65809627 65809753 -133820397 - MIR3 SINE MIR -42 166 45 190 313 0 0 chr5 65809850 65809898 -133820252 + MIR SINE MIR 59 106 -156 306 260 48 29 chr5 65810773 65810877 -133819273 - L1MC5 LINE L1 -49 7912 7807 390 287 97 23 chr5 65811097 65811313 -133818837 - L1ME3A LINE L1 -292 5878 5647 315 256 33 83 chr5 65811538 65811659 -133818491 - L1MEd LINE L1 -5737 382 268 397 282 46 36 chr5 65811884 65812079 -133818071 - L1MEd LINE L1 -3227 2902 2706 2029 158 36 0 chr5 65812115 65812445 -133817705 + MER7A DNA MER2_type 1 340 -6 3380 182 54 10 chr5 65812813 65813516 -133816634 + MER50 LTR ERV1 1 734 0 316 117 33 17 chr5 65813546 65813606 -133816544 - MER116 DNA Mariner -4 76 16 317 297 149 75 chr5 65813734 65814158 -133815992 - L1MEd LINE L1 -5550 569 115 2033 140 14 0 chr5 65814291 65814583 -133815567 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr5 65814656 65814677 -133815473 + AT_rich Low_complexity Low_complexity 1 21 0 2435 170 58 23 chr5 65814900 65815661 -133814489 + L1MB4 LINE L1 4682 5466 -714 2626 207 53 98 chr5 65815673 65816514 -133813636 - MER21B LTR ERV1 -48 815 12 2965 189 44 28 chr5 65816542 65816669 -133813481 + L1MB4 LINE L1 5478 5601 -579 2104 99 0 23 chr5 65816669 65816971 -133813179 + AluY SINE Alu 1 295 -16 2965 189 44 28 chr5 65816971 65817529 -133812621 + L1MB4 LINE L1 5601 6174 -6 192 333 0 0 chr5 65817577 65817634 -133812516 + MIR SINE MIR 40 96 -166 788 227 67 27 chr5 65817652 65817877 -133812273 - MIR SINE MIR 0 262 29 441 0 0 0 chr5 65818084 65818133 -133812017 + (TAA)n Simple_repeat Simple_repeat 3 51 0 1843 165 0 13 chr5 65818462 65818765 -133811385 - AluJo SINE Alu -13 299 1 183 318 47 0 chr5 65819018 65819103 -133811047 - L3b LINE CR1 -341 1242 1154 303 324 170 48 chr5 65819583 65820318 -133809832 + L2 LINE L2 1278 2102 -1212 446 262 91 46 chr5 65820570 65820757 -133809393 - MER20B DNA MER1_type -21 198 1 2538 66 0 0 chr5 65821171 65821475 -133808675 - AluY SINE Alu -7 304 1 23 33 0 0 chr5 65822807 65822837 -133807313 + AT_rich Low_complexity Low_complexity 1 30 0 1653 180 17 3 chr5 65823488 65823783 -133806367 - AluJo SINE Alu -11 301 3 5300 103 26 5 chr5 65823944 65824740 -133805410 + L1PA16 LINE L1 5352 6164 -2 204 179 0 0 chr5 65824856 65824895 -133805255 + (TA)n Simple_repeat Simple_repeat 2 40 0 2216 147 15 2 chr5 65825169 65825563 -133804587 - L1MB4 LINE L1 -1 6179 5781 2236 93 0 3 chr5 65825638 65825929 -133804221 - AluY SINE Alu 0 311 22 23 0 0 0 chr5 65825997 65826020 -133804130 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 65826042 65826070 -133804080 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 65826115 65826138 -133804012 + AT_rich Low_complexity Low_complexity 1 23 0 1299 174 83 30 chr5 65826156 65826420 -133803730 + AluJo SINE Alu 5 282 -30 2399 70 0 22 chr5 65826886 65827200 -133802950 - AluY SINE Alu -4 307 1 1500 111 0 0 chr5 65827201 65827400 -133802750 - AluSg/x SINE Alu -20 292 94 386 254 102 0 chr5 65828197 65828315 -133801835 + LTR67 LTR ERVL 428 557 0 1639 247 125 27 chr5 65828652 65829268 -133800882 + L1MC4a LINE L1 5258 5937 -1871 3858 91 39 4 chr5 65829268 65829828 -133800322 + LTR19B LTR ERV1 1 580 0 2061 140 20 31 chr5 65830377 65830728 -133799422 - MER7A DNA MER2_type 0 346 2 2094 134 0 0 chr5 65831794 65832084 -133798066 + AluSx SINE Alu 1 290 -22 24 32 0 0 chr5 65832084 65832115 -133798035 + AT_rich Low_complexity Low_complexity 1 31 0 2096 104 3 32 chr5 65832281 65832589 -133797561 + AluY SINE Alu 1 299 -12 261 135 289 0 chr5 65832800 65832852 -133797298 + MER30 DNA MER1_type 1 67 -163 907 118 56 0 chr5 65833121 65833265 -133796885 + MER30 DNA MER1_type 64 215 -15 202 207 103 52 chr5 65833982 65834040 -133796110 - L2 LINE L2 -84 3229 3169 818 309 146 24 chr5 65835025 65835688 -133794462 + L2 LINE L2 2074 2817 -497 621 271 135 13 chr5 65835715 65835944 -133794206 + MIR SINE MIR 6 262 0 515 334 63 28 chr5 65836161 65836478 -133793672 + L2 LINE L2 2925 3252 -20 233 219 62 0 chr5 65836609 65836673 -133793477 + MER103 DNA DNA 8 75 -91 425 284 34 47 chr5 65836957 65837105 -133793045 - MIR3 SINE MIR -12 196 51 515 316 52 65 chr5 65838551 65838861 -133791289 - L2 LINE L2 -1 3271 2966 257 238 12 50 chr5 65839348 65839428 -133790722 - MER20 DNA MER1_type -142 77 1 349 257 156 84 chr5 65839451 65839763 -133790387 + L2 LINE L2 2922 3313 0 356 269 51 51 chr5 65839929 65840126 -133790024 - L2 LINE L2 -2 3311 3115 257 260 14 0 chr5 65840630 65840703 -133789447 - Charlie7 DNA MER1_type -1851 761 688 914 249 48 9 chr5 65840966 65841195 -133788955 - MIR SINE MIR 0 262 25 237 242 84 32 chr5 65841231 65841326 -133788824 + Charlie7 DNA MER1_type 1 100 -2512 23 33 0 0 chr5 65841332 65841362 -133788788 + AT_rich Low_complexity Low_complexity 1 30 0 1954 139 19 16 chr5 65841370 65841679 -133788471 + AluSx SINE Alu 3 312 0 2270 92 0 3 chr5 65841683 65841975 -133788175 + AluSg SINE Alu 3 293 -17 702 256 130 5 chr5 65842014 65842345 -133787805 + Charlie7 DNA MER1_type 325 761 -1851 1285 118 11 0 chr5 65842351 65842538 -133787612 + L1MB7 LINE L1 5863 6051 -133 1026 216 53 13 chr5 65843185 65843412 -133786738 - AluJo SINE Alu -16 296 61 22 35 0 0 chr5 65843677 65843706 -133786444 + AT_rich Low_complexity Low_complexity 1 29 0 336 276 207 6 chr5 65844739 65844913 -133785237 - MARNA DNA Mariner -59 527 319 489 17 0 0 chr5 65845090 65845148 -133785002 + (GA)n Simple_repeat Simple_repeat 1 58 0 235 257 0 0 chr5 65846652 65846722 -133783428 + CT-rich Low_complexity Low_complexity 1 70 0 226 320 72 10 chr5 65846723 65846820 -133783330 + L2 LINE L2 2637 2739 -575 259 239 136 11 chr5 65847424 65847512 -133782638 + L2 LINE L2 3215 3313 0 484 298 111 0 chr5 65847519 65847690 -133782460 - MLT1L LTR MaLR -10 605 416 2713 158 30 27 chr5 65847909 65848084 -133782066 - L1MB5 LINE L1 -6 6168 5995 1967 127 46 35 chr5 65848084 65848455 -133781695 + THE1C LTR MaLR 1 375 0 2713 158 30 27 chr5 65848455 65848804 -133781346 - L1MB5 LINE L1 -179 5995 5642 369 186 48 14 chr5 65848919 65849064 -133781086 + (TA)n Simple_repeat Simple_repeat 2 151 0 255 125 0 0 chr5 65849073 65849113 -133781037 + (CA)n Simple_repeat Simple_repeat 2 41 0 25 51 0 0 chr5 65849436 65849475 -133780675 + AT_rich Low_complexity Low_complexity 1 39 0 1096 179 41 0 chr5 65849682 65849877 -133780273 - MER20 DNA MER1_type 0 219 17 23 0 0 0 chr5 65850133 65850156 -133779994 + AT_rich Low_complexity Low_complexity 1 23 0 243 103 0 0 chr5 65850282 65850321 -133779829 + (TTA)n Simple_repeat Simple_repeat 2 40 0 2218 96 0 0 chr5 65850404 65850738 -133779412 + AluSx SINE Alu 1 334 0 439 204 44 9 chr5 65853393 65853506 -133776644 + MIR SINE MIR 105 221 -41 24 53 0 0 chr5 65853600 65853638 -133776512 + AT_rich Low_complexity Low_complexity 1 38 0 235 392 20 0 chr5 65854154 65854256 -133775894 + L3b LINE CR1 1148 1251 -332 2258 108 0 3 chr5 65854256 65854561 -133775589 + AluY SINE Alu 2 305 -6 251 213 13 93 chr5 65854656 65854731 -133775419 + MIR SINE MIR 124 192 -70 322 143 20 0 chr5 65855145 65855194 -133774956 - THE1A LTR MaLR 0 355 306 1959 129 40 35 chr5 65855219 65855592 -133774558 - THE1C LTR MaLR 0 375 1 243 0 0 0 chr5 65855597 65855624 -133774526 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 201 147 0 0 chr5 65855921 65855955 -133774195 + (T)n Simple_repeat Simple_repeat 1 34 0 283 247 21 82 chr5 65856068 65856165 -133773985 + L2 LINE L2 3174 3264 -8 487 280 45 55 chr5 65856403 65856603 -133773547 - MIR SINE MIR -56 206 9 488 313 20 20 chr5 65857807 65857957 -133772193 - MIR SINE MIR -66 196 47 213 409 41 6 chr5 65858891 65859062 -133771088 + L2 LINE L2 2511 2687 -627 364 360 7 7 chr5 65859186 65859336 -133770814 + MER5B DNA MER1_type 2 151 -27 250 328 116 4 chr5 65859762 65859926 -133770224 + MIR3 SINE MIR 2 181 -72 411 200 168 0 chr5 65861086 65861181 -133768969 - MIR3 SINE MIR -3 205 95 * 743 277 62 13 chr5 65861177 65861401 -133768749 + L3 LINE CR1 354 588 -989 564 328 68 32 chr5 65861447 65861785 -133768365 + L3 LINE CR1 931 1280 -297 2320 166 51 41 chr5 65862393 65862886 -133767264 - MLT1D LTR MaLR -2 503 6 444 307 128 35 chr5 65862931 65863049 -133767101 + L3 LINE CR1 1296 1402 -175 384 22 0 0 chr5 65863049 65863094 -133767056 + (TG)n Simple_repeat Simple_repeat 2 46 0 444 307 128 35 chr5 65863094 65863232 -133766918 + L3 LINE CR1 1402 1576 -1 2259 118 58 97 chr5 65863248 65863731 -133766419 - MLT2C2 LTR ERVL 0 464 1 773 203 6 0 chr5 65863794 65863971 -133766179 + CT-rich Low_complexity Low_complexity 2 179 0 21 36 0 0 chr5 65864256 65864284 -133765866 + AT_rich Low_complexity Low_complexity 1 28 0 593 162 34 0 chr5 65864705 65864822 -133765328 - L1MA8 LINE L1 -70 6221 6101 542 213 109 74 chr5 65866152 65866354 -133763796 + MIR SINE MIR 38 246 -16 2237 95 0 0 chr5 65866357 65866640 -133763510 + AluSc SINE Alu 1 283 -26 493 303 171 36 chr5 65868623 65869293 -133760857 - L2 LINE L2 -185 3087 2315 413 341 100 0 chr5 65869500 65869670 -133760480 - MER5A DNA MER1_type -2 187 1 973 254 44 53 chr5 65869821 65870163 -133759987 - L2 LINE L2 -40 3273 2935 183 100 0 0 chr5 65870578 65870608 -133759542 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 21 36 0 0 chr5 65872029 65872057 -133758093 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr5 65872077 65872102 -133758048 + AT_rich Low_complexity Low_complexity 1 25 0 275 137 98 0 chr5 65872540 65872591 -133757559 - MLT1A2 LTR MaLR -12 362 307 21 0 0 0 chr5 65872763 65872784 -133757366 + AT_rich Low_complexity Low_complexity 1 21 0 889 138 88 13 chr5 65873171 65873330 -133756820 + FRAM SINE Alu 1 164 -12 187 359 48 21 chr5 65874317 65874462 -133755688 + L2 LINE L2 1750 1898 -1416 609 257 164 0 chr5 65874570 65874722 -133755428 + MER5A DNA MER1_type 10 186 -3 259 308 117 17 chr5 65875113 65875233 -133754917 + L2 LINE L2 3182 3313 0 23 0 0 0 chr5 65875233 65875256 -133754894 + AT_rich Low_complexity Low_complexity 1 23 0 466 305 0 0 chr5 65875269 65875400 -133754750 - MER5B DNA MER1_type -1 177 58 629 189 33 99 chr5 65875400 65875643 -133754507 - L1ME3A LINE L1 0 6170 5944 * 998 171 68 24 chr5 65875635 65875852 -133754298 - L1MA7 LINE L1 -2 6289 6058 2125 117 0 0 chr5 65875852 65876151 -133753999 - AluY SINE Alu -12 299 1 998 171 68 24 chr5 65876151 65876185 -133753965 - L1MA7 LINE L1 -233 6058 6027 * 5135 158 14 12 chr5 65876181 65877127 -133753023 - L1 LINE L1 -792 5354 4407 192 310 17 0 chr5 65877174 65877232 -133752918 - MER5B DNA MER1_type -113 65 7 299 350 60 30 chr5 65927332 65927532 -133702618 + L3 LINE CR1 1291 1496 -81 293 339 62 0 chr5 65927685 65927797 -133702353 - MER91A DNA MER1_type -73 123 5 492 360 28 23 chr5 65927797 65928011 -133702139 - MIR SINE MIR -28 234 20 288 284 57 7 chr5 65928450 65928591 -133701559 - L2 LINE L2 -772 2542 2395 424 217 49 21 chr5 65928678 65928821 -133701329 + LTR16A LTR ERVL 304 450 0 1160 180 15 0 chr5 65930497 65930697 -133699453 + MER58A DNA MER1_type 22 224 0 359 303 57 57 chr5 65930945 65931209 -133698941 - L3 LINE CR1 -43 1534 1271 269 350 24 24 chr5 65931323 65931446 -133698704 - MIR SINE MIR -98 164 42 1329 249 84 11 chr5 65931911 65932292 -133697858 + MLT1I LTR MaLR 1 409 0 540 68 0 0 chr5 65932539 65932612 -133697538 + (CTA)n Simple_repeat Simple_repeat 3 75 0 232 174 0 0 chr5 65932680 65932726 -133697424 - MIR SINE MIR -115 147 102 325 315 31 39 chr5 65933055 65933182 -133696968 - MIR SINE MIR -135 127 2 506 270 49 25 chr5 65933603 65933766 -133696384 + MIR SINE MIR 96 262 0 180 0 0 0 chr5 65934386 65934406 -133695744 + (T)n Simple_repeat Simple_repeat 1 20 0 510 326 0 0 chr5 65935120 65935267 -133694883 - MIR SINE MIR -113 149 3 181 345 73 30 chr5 65935747 65935912 -133694238 - L2 LINE L2 -830 2484 2313 302 96 0 0 chr5 65936135 65936187 -133693963 - L1MB2 LINE L1 -2 6169 6118 1070 165 65 4 chr5 65936188 65936542 -133693608 - MSTB LTR MaLR -2 424 1 3414 175 49 2 chr5 65936552 65937180 -133692970 - L1MB2 LINE L1 -65 6106 5449 333 68 0 0 chr5 65939135 65939179 -133690971 + (TG)n Simple_repeat Simple_repeat 2 45 0 1941 283 48 71 chr5 65940592 65941489 -133688661 + L1M3b LINE L1 2 761 -5520 1728 296 38 60 chr5 65941459 65942173 -133687977 + L1M3b LINE L1 613 1310 -4971 * 319 143 0 0 chr5 65942631 65942680 -133687470 - MER66B LTR ERV1 -140 346 298 632 311 58 9 chr5 65943460 65943685 -133686465 - MIR SINE MIR -7 255 20 277 297 102 55 chr5 65945040 65945168 -133684982 + MIR SINE MIR 57 190 -72 1572 266 25 16 chr5 65945410 65945970 -133684180 + L1M3b LINE L1 1477 2041 -4310 9912 213 42 19 chr5 65945980 65946503 -133683647 + L1MA7 LINE L1 3034 3544 -4021 2413 109 0 0 chr5 65946503 65946814 -133683336 + AluSx SINE Alu 1 311 -1 9912 213 42 19 chr5 65946814 65949183 -133680967 + L1MA7 LINE L1 3544 5982 -1583 1125 147 35 5 chr5 65949185 65949382 -133680768 + MSTA LTR MaLR 1 203 -225 282 164 123 27 chr5 65949419 65949492 -133680658 + THE1C LTR MaLR 2 81 -294 279 0 0 0 chr5 65949592 65949623 -133680527 + (A)n Simple_repeat Simple_repeat 1 31 0 333 0 0 0 chr5 65949623 65949660 -133680490 + (TA)n Simple_repeat Simple_repeat 1 37 0 330 353 62 47 chr5 65949906 65950164 -133679986 - L2 LINE L2 -557 2757 2496 407 339 24 44 chr5 65950190 65950277 -133679873 + L2 LINE L2 2304 2391 -923 1433 240 17 47 chr5 65950277 65950685 -133679465 - MSTD LTR MaLR 0 396 1 407 339 24 44 chr5 65950685 65950845 -133679305 + L2 LINE L2 2391 2546 -768 2309 101 0 13 chr5 65950892 65951208 -133678942 - AluSp SINE Alu -1 312 1 953 211 55 32 chr5 65951238 65951456 -133678694 + MER58A DNA MER1_type 2 224 0 2221 115 3 0 chr5 65951525 65951830 -133678320 - AluY SINE Alu -5 306 1 759 244 5 16 chr5 65951832 65952025 -133678125 - AluYa5 SINE Alu -18 293 103 13965 93 0 0 chr5 65952126 65954872 -133675278 + L1PA7 LINE L1 3416 6166 0 358 178 14 14 chr5 65954872 65954945 -133675205 + L1MC4 LINE L1 7227 7299 -743 509 231 138 93 chr5 65954948 65955172 -133674978 + L1MC4 LINE L1 7649 7894 -148 2377 94 7 0 chr5 65955172 65955479 -133674671 + AluSg SINE Alu 1 309 -1 509 231 138 93 chr5 65955479 65955587 -133674563 + L1MC4 LINE L1 7894 7996 -46 885 129 7 7 chr5 65955688 65955835 -133674315 + THE1C LTR MaLR 233 373 -2 5186 168 35 27 chr5 65955840 65957536 -133672614 + L1MA7 LINE L1 5992 7700 -10 2095 116 7 3 chr5 65958328 65958622 -133671528 - AluSx SINE Alu -17 295 1 24 0 0 0 chr5 65958625 65958649 -133671501 + AT_rich Low_complexity Low_complexity 1 24 0 504 253 0 58 chr5 65958882 65959036 -133671114 + L3 LINE CR1 1260 1404 -173 582 226 15 0 chr5 65959136 65959273 -133670877 - L1MA7 LINE L1 -126 6165 6027 190 273 0 0 chr5 65959311 65959355 -133670795 - L2 LINE L2 -6 3307 3264 1786 216 30 9 chr5 65960725 65961156 -133668994 - L1M4 LINE L1 -3060 3086 2647 343 298 40 24 chr5 65961401 65961525 -133668625 - MIR SINE MIR -117 145 20 198 0 0 0 chr5 65962210 65962232 -133667918 + (TTG)n Simple_repeat Simple_repeat 2 23 0 688 186 155 0 chr5 65962760 65962921 -133667229 + MER5A DNA MER1_type 4 189 0 224 232 179 71 chr5 65963182 65963294 -133666856 + MIR SINE MIR 108 231 -31 21 0 0 0 chr5 65964741 65964762 -133665388 + AT_rich Low_complexity Low_complexity 1 21 0 192 216 0 0 chr5 65965495 65965532 -133664618 - MER5B DNA MER1_type 0 178 142 264 270 0 14 chr5 65965561 65965635 -133664515 + MER5B DNA MER1_type 106 178 0 254 409 53 0 chr5 65967208 65967340 -133662810 - L2 LINE L2 -32 3240 3102 371 129 65 0 chr5 65967428 65967490 -133662660 - MER116 DNA Mariner -3 77 12 1491 107 8 26 chr5 65968442 65968676 -133661474 - MER30 DNA MER1_type 0 230 1 393 322 40 23 chr5 65968946 65969120 -133661030 - MIR SINE MIR -35 227 51 438 300 89 66 chr5 65969204 65969551 -133660599 - L2 LINE L2 -568 2746 2392 760 252 96 24 chr5 65969666 65969916 -133660234 - MLT1I LTR MaLR -2 407 140 25 0 0 0 chr5 65970140 65970165 -133659985 + AT_rich Low_complexity Low_complexity 1 25 0 280 210 81 0 chr5 65970371 65970433 -133659717 - MLT1K LTR MaLR -8 580 514 537 306 68 25 chr5 65970779 65971230 -133658920 + MLT1J LTR MaLR 1 511 0 714 118 8 25 chr5 65973201 65973320 -133656830 + L1PA14 LINE L1 6042 6158 -3 2616 99 3 6 chr5 65973327 65973691 -133656459 + THE1B LTR MaLR 1 363 -1 180 0 0 0 chr5 65974336 65974356 -133655794 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2067 204 42 21 chr5 65974504 65975023 -133655127 + L1M4 LINE L1 4777 5306 -840 435 49 33 0 chr5 65975027 65975088 -133655062 - AluSc SINE Alu -11 298 236 580 258 79 31 chr5 65975785 65976150 -133654000 + L1MC4 LINE L1 6957 7340 -702 1478 214 21 0 chr5 65976151 65976436 -133653714 + AluJo SINE Alu 1 291 -21 288 187 0 47 chr5 65976438 65976545 -133653605 + G-rich Low_complexity Low_complexity 5 106 0 354 235 38 60 chr5 65976678 65976861 -133653289 + L1MC5 LINE L1 7317 7495 -466 2090 175 6 17 chr5 65976863 65977223 -133652927 + MLT1A1 LTR MaLR 10 365 0 302 256 112 25 chr5 65977229 65977471 -133652679 + L1MC5 LINE L1 7509 7771 -190 302 295 18 9 chr5 65977756 65977868 -133652282 + LTR67 LTR ERVL 432 544 -13 256 146 0 42 chr5 65978491 65978539 -133651611 + MLT1G1 LTR MaLR 50 95 -447 416 295 132 38 chr5 65978743 65979062 -133651088 + MLT1G1 LTR MaLR 246 594 -1 520 245 200 5 chr5 65979782 65979982 -133650168 + MIR SINE MIR 3 241 -21 412 234 0 0 chr5 65980359 65980453 -133649697 - L1M4 LINE L1 -2458 3688 3595 2184 180 100 101 chr5 65980502 65981442 -133648708 - L1ME2 LINE L1 -10 6154 5215 2366 42 0 11 chr5 65981442 65981762 -133648388 - AluY SINE Alu 0 317 1 2184 180 100 101 chr5 65981762 65981775 -133648375 - L1ME2 LINE L1 -949 5215 5203 2780 7 0 3 chr5 65981775 65982084 -133648066 - AluY SINE Alu -3 308 1 2184 180 100 101 chr5 65982084 65982143 -133648007 - L1ME2 LINE L1 -961 5203 5142 208 344 21 0 chr5 65983235 65983328 -133646822 - L2 LINE L2 -212 3060 2966 24 0 0 0 chr5 65984489 65984513 -133645637 + AT_rich Low_complexity Low_complexity 1 24 0 2581 169 39 8 chr5 65984602 65985118 -133645032 - L1 LINE L1 -780 6068 5537 844 136 37 25 chr5 65985122 65985284 -133644866 - L1MEd LINE L1 -4723 2126 1963 2322 94 0 13 chr5 65985284 65985593 -133644557 - AluSg SINE Alu -5 305 1 976 175 12 0 chr5 65985598 65985758 -133644392 - AluSg/x SINE Alu -12 298 137 775 281 39 31 chr5 65985758 65986018 -133644132 - L1MEd LINE L1 -5855 983 722 198 355 0 0 chr5 65986533 65986595 -133643555 + L2 LINE L2 3009 3070 -243 386 283 80 66 chr5 65986995 65987207 -133642943 - MIR SINE MIR 0 262 48 3794 137 27 9 chr5 65988168 65988833 -133641317 + L1MA4A LINE L1 5621 6297 -6 261 0 0 0 chr5 65989601 65989630 -133640520 + (A)n Simple_repeat Simple_repeat 1 29 0 204 226 75 38 chr5 65989714 65989767 -133640383 - MIR SINE MIR -70 138 84 19411 106 10 30 chr5 65991533 65994532 -133635618 - L1P LINE L1 -3196 2950 11 2436 84 0 0 chr5 65995240 65995551 -133634599 + AluY SINE Alu 1 311 0 533 291 78 33 chr5 65995602 65995873 -133634277 + L1MEd LINE L1 551 833 -5286 345 286 78 26 chr5 65995933 65996202 -133633948 + L1MEd LINE L1 3070 3352 -2777 2699 259 108 30 chr5 65996448 65998462 -133631688 + L1MEd LINE L1 3722 5898 -255 1896 184 13 71 chr5 65998998 65999450 -133630700 + MLT2B1 LTR ERVL 1 426 -94 276 77 0 0 chr5 65999477 65999516 -133630634 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr5 65999684 65999712 -133630438 + AT_rich Low_complexity Low_complexity 1 28 0 1640 126 43 31 chr5 65999786 66000112 -133630038 + L1MA8 LINE L1 5958 6287 -4 24 0 0 0 chr5 66000729 66000753 -133629397 + AT_rich Low_complexity Low_complexity 1 24 0 3307 136 7 81 chr5 66000893 66001598 -133628552 - L1PA16 LINE L1 0 6166 5514 1559 104 0 14 chr5 66001599 66001810 -133628340 - AluSq SINE Alu -101 212 5 6169 253 109 13 chr5 66001816 66004729 -133625421 - L1PA13 LINE L1 -2293 4504 1225 321 312 35 50 chr5 66004789 66004930 -133625220 - L1PA13 LINE L1 -6175 612 474 762 322 4 13 chr5 66004945 66005172 -133624978 - L1PA13 LINE L1 -6561 226 2 310 258 80 52 chr5 66005688 66005841 -133624309 + MIR SINE MIR 36 201 -61 288 0 0 0 chr5 66006502 66006534 -133623616 + (CA)n Simple_repeat Simple_repeat 2 33 0 305 388 30 0 chr5 66006559 66006693 -133623457 + MIR SINE MIR 14 151 -111 577 323 52 32 chr5 66006900 66007210 -133622940 - MLT1K LTR MaLR -195 393 78 204 305 0 0 chr5 66007213 66007272 -133622878 + MIR SINE MIR 146 204 -58 1079 76 0 0 chr5 66009287 66009419 -133620731 + AluSq/x SINE Alu 1 132 -181 180 0 0 0 chr5 66009638 66009658 -133620492 + (CA)n Simple_repeat Simple_repeat 2 21 0 1296 298 113 43 chr5 66009661 66010539 -133619611 + L1MC4a LINE L1 5971 6909 -899 4219 169 25 41 chr5 66010552 66011461 -133618689 + L1MB7 LINE L1 5274 6168 -16 2959 214 84 42 chr5 66011516 66012480 -133617670 + L1MC4 LINE L1 7039 8042 0 29 94 0 0 chr5 66012480 66012565 -133617585 + AT_rich Low_complexity Low_complexity 1 85 0 371 309 108 11 chr5 66012811 66013140 -133617010 - L1ME3A LINE L1 -239 5931 5569 603 226 37 67 chr5 66013140 66013304 -133616846 - MIR SINE MIR -50 212 54 247 286 0 13 chr5 66013324 66013401 -133616749 - L1ME LINE L1 -553 5617 5542 195 129 0 0 chr5 66014447 66014478 -133615672 + (TA)n Simple_repeat Simple_repeat 1 31 0 245 258 30 0 chr5 66014587 66014653 -133615497 - MIR SINE MIR -11 251 184 1708 154 24 10 chr5 66014664 66014956 -133615194 + AluJo SINE Alu 1 296 -16 454 283 25 0 chr5 66015106 66015226 -133614924 + L2 LINE L2 3148 3270 -2 29 28 0 0 chr5 66016541 66016577 -133613573 + AT_rich Low_complexity Low_complexity 1 36 0 242 193 8 109 chr5 66016906 66016917 -133613233 + Charlie7 DNA MER1_type 2451 2462 -150 2074 144 33 3 chr5 66016917 66017251 -133612899 - MER2 DNA MER2_type 0 344 1 242 193 8 109 chr5 66017251 66017358 -133612792 + Charlie7 DNA MER1_type 2462 2557 -55 1558 188 40 19 chr5 66017358 66017731 -133612419 + L1MB7 LINE L1 5753 6133 -51 2191 214 140 39 chr5 66017754 66018638 -133611512 + L1MD3 LINE L1 5220 5403 -743 760 219 96 0 chr5 66019028 66019279 -133610871 - MER33 DNA MER1_type 0 324 50 408 135 433 0 chr5 66019288 66019392 -133610758 - MER5B DNA MER1_type -29 149 1 296 389 120 16 chr5 66019480 66019848 -133610302 - L2 LINE L2 -340 2974 2569 336 189 14 0 chr5 66020840 66020914 -133609236 + MER116 DNA Mariner 3 77 -3 544 259 31 19 chr5 66020931 66021093 -133609057 + MER112 DNA MER1_type 96 259 -1 227 250 204 23 chr5 66023533 66023621 -133606529 + MIR SINE MIR 39 142 -66 2292 259 294 21 chr5 66023890 66025337 -133604813 - L2 LINE L2 -40 3273 1415 500 224 13 72 chr5 66025393 66025545 -133604605 + MLT1L LTR MaLR 252 394 -221 492 248 34 0 chr5 66025579 66025696 -133604454 + L2 LINE L2 3192 3312 -1 1706 155 9 50 chr5 66026781 66027103 -133603047 - AluJo SINE Alu -1 311 3 28 0 0 0 chr5 66027307 66027335 -133602815 + AT_rich Low_complexity Low_complexity 1 28 0 341 191 103 0 chr5 66027335 66027403 -133602747 - MIR SINE MIR -108 154 80 23 0 0 0 chr5 66027782 66027805 -133602345 + AT_rich Low_complexity Low_complexity 1 23 0 1683 207 83 58 chr5 66027827 66028156 -133601994 + L1MC4 LINE L1 6478 6797 -1091 1832 102 12 0 chr5 66028156 66028410 -133601740 + AluSx SINE Alu 54 310 -2 1683 207 83 58 chr5 66028410 66028644 -133601506 + L1MC4 LINE L1 6797 7169 -719 5818 95 10 1 chr5 66028672 66029490 -133600660 + L1P3 LINE L1 1 825 -5636 315 211 37 68 chr5 66029590 66029671 -133600479 + L1M4 LINE L1 5228 5310 -836 1592 122 12 12 chr5 66029671 66029925 -133600225 - AluSc SINE Alu -11 298 45 315 211 37 68 chr5 66029925 66030021 -133600129 + L1M4 LINE L1 5310 5402 -744 288 313 60 60 chr5 66030570 66030787 -133599363 - L2 LINE L2 -463 2851 2635 257 314 56 53 chr5 66031600 66031794 -133598356 + MIR SINE MIR 32 223 -39 29 78 0 0 chr5 66032459 66032523 -133597627 + AT_rich Low_complexity Low_complexity 1 64 0 497 342 32 7 chr5 66033080 66033235 -133596915 + MER91A DNA MER1_type 3 161 -35 2289 103 0 0 chr5 66033310 66033620 -133596530 - AluY SINE Alu -1 310 1 208 327 0 47 chr5 66033851 66033958 -133596192 + MIR3 SINE MIR 96 197 -11 2107 210 23 26 chr5 66034104 66034314 -133595836 - L1M4 LINE L1 -2976 3170 2961 1118 236 57 54 chr5 66034314 66034665 -133595485 + MLT2C1 LTR ERVL 4 358 -39 446 75 15 0 chr5 66034665 66034732 -133595418 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 1118 236 57 54 chr5 66034732 66034769 -133595381 + MLT2C1 LTR ERVL 358 393 -4 2107 210 23 26 chr5 66034769 66035087 -133595063 - L1M4 LINE L1 -3185 2961 2644 502 313 39 16 chr5 66036073 66036255 -133593895 + MIR SINE MIR 20 205 -57 1382 209 42 12 chr5 66036333 66036592 -133593558 + Tigger7 DNA MER2_type 1 267 -2220 478 147 0 78 chr5 66036591 66036693 -133593457 + Tigger7 DNA MER2_type 2391 2484 -3 * 1271 180 4 16 chr5 66036954 66037199 -133592951 - MLT1A1 LTR MaLR 0 365 124 251 217 0 0 chr5 66037173 66037219 -133592931 + MLT1A1 LTR MaLR 116 161 -204 * 192 314 43 29 chr5 66037238 66037308 -133592842 - MIR3 SINE MIR -51 157 87 2635 65 0 0 chr5 66038232 66038573 -133591577 - L1PA7 LINE L1 0 6154 5814 2035 70 18 0 chr5 66038615 66038887 -133591263 - L1PA5 LINE L1 -1 6153 5877 3860 70 13 0 chr5 66038887 66039418 -133590732 + L1P LINE L1 4862 5399 -747 923 26 9 0 chr5 66039405 66039519 -133590631 - L1PA6 LINE L1 -321 5833 5719 * 3487 195 63 15 chr5 66039982 66040065 -133590085 - Charlie1a DNA MER1_type -1306 1455 1377 438 53 0 0 chr5 66040065 66040122 -133590028 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 3487 195 63 15 chr5 66040122 66040181 -133589969 - Charlie1a DNA MER1_type -1384 1377 1322 848 153 0 7 chr5 66040181 66040325 -133589825 + L1PA15 LINE L1 6021 6163 -2 3487 195 63 15 chr5 66040325 66041034 -133589116 - Charlie1a DNA MER1_type -1439 1322 562 1553 217 143 11 chr5 66041035 66041505 -133588645 - Charlie1a DNA MER1_type -922 533 2 623 218 114 33 chr5 66041508 66041719 -133588431 + MIR SINE MIR 11 238 -24 24 0 0 0 chr5 66043645 66043669 -133586481 + AT_rich Low_complexity Low_complexity 1 24 0 180 320 20 0 chr5 66044680 66044730 -133585420 - L3b LINE CR1 -71 1512 1462 216 0 0 0 chr5 66045130 66045154 -133584996 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 294 184 0 0 chr5 66047686 66047735 -133582415 + L2 LINE L2 3224 3272 0 186 343 29 0 chr5 66048665 66048770 -133581380 - L2 LINE L2 -1625 1689 1582 * 303 329 6 48 chr5 66048760 66048927 -133581223 + MER5A DNA MER1_type 8 167 -22 22 0 0 0 chr5 66049935 66049957 -133580193 + AT_rich Low_complexity Low_complexity 1 22 0 278 305 0 29 chr5 66050428 66050533 -133579617 + CT-rich Low_complexity Low_complexity 4 105 0 360 0 0 0 chr5 66050541 66050581 -133579569 + (TG)n Simple_repeat Simple_repeat 2 41 0 24 53 0 0 chr5 66051817 66051855 -133578295 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 66051883 66051913 -133578237 + AT_rich Low_complexity Low_complexity 1 30 0 1697 125 4 4 chr5 66052198 66052465 -133577685 - AluSx SINE Alu 0 312 46 1219 219 40 0 chr5 66052859 66053133 -133577017 + L1MD3 LINE L1 6729 7013 -982 194 32 63 63 chr5 66053137 66053200 -133576950 + (TATAA)n Simple_repeat Simple_repeat 3 65 0 273 208 58 13 chr5 66053202 66053356 -133576794 + (TA)n Simple_repeat Simple_repeat 1 161 0 31 0 0 0 chr5 66053387 66053418 -133576732 + AT_rich Low_complexity Low_complexity 1 31 0 2972 207 78 19 chr5 66053431 66054251 -133575899 + L1MC4a LINE L1 6940 7807 -1 360 0 0 0 chr5 66054486 66054530 -133575620 + AluY SINE Alu 1 44 -264 315 100 0 0 chr5 66055632 66055682 -133574468 + L1MB7 LINE L1 6118 6167 -17 396 0 0 0 chr5 66056614 66056658 -133573492 + (TTG)n Simple_repeat Simple_repeat 2 45 0 2020 118 0 0 chr5 66056658 66056937 -133573213 - AluSx SINE Alu -33 279 1 272 232 78 42 chr5 66057231 66057373 -133572777 - L1ME4a LINE L1 -11 6110 5964 22 70 0 0 chr5 66057697 66057740 -133572410 + AT_rich Low_complexity Low_complexity 1 43 0 355 280 67 53 chr5 66058747 66058772 -133571378 - MIR3 SINE MIR -41 167 144 2177 114 0 0 chr5 66058772 66059070 -133571080 - AluSg SINE Alu -12 298 1 355 280 67 53 chr5 66059070 66059194 -133570956 - MIR3 SINE MIR -64 144 16 300 152 0 0 chr5 66060209 66060255 -133569895 - L1ME4a LINE L1 -589 5755 5710 403 287 137 15 chr5 66060312 66060720 -133569430 + L1MEd LINE L1 667 1124 -5081 294 311 19 0 chr5 66060749 66060855 -133569295 + L1MEd LINE L1 1193 1300 -4905 370 311 25 6 chr5 66061078 66061239 -133568911 + L1MEd LINE L1 1654 1817 -4579 1459 175 53 4 chr5 66061772 66062035 -133568115 + AluSx SINE Alu 1 276 -36 4244 65 2 26 chr5 66062029 66062602 -133567548 + L1PA6 LINE L1 5594 6152 -2 672 311 80 0 chr5 66062669 66063045 -133567105 + L1MEd LINE L1 2485 2890 -3325 292 202 126 71 chr5 66063070 66063253 -133566897 + L1MEd LINE L1 3044 3236 -2979 681 311 98 25 chr5 66063550 66063907 -133566243 - MLT1J LTR MaLR -56 455 73 266 333 0 12 chr5 66064179 66064260 -133565890 + L2 LINE L2 3234 3313 0 1414 199 45 19 chr5 66064549 66065574 -133564576 - L1ME1 LINE L1 -44 6122 4974 6952 132 35 32 chr5 66065575 66065730 -133564420 - Tigger3b DNA MER2_type -1797 1231 1078 1567 104 45 0 chr5 66065730 66065950 -133564200 - MER30 DNA MER1_type 0 230 1 6952 132 35 32 chr5 66065950 66066092 -133564058 - Tigger3b DNA MER2_type -1950 1078 938 1831 67 13 0 chr5 66066092 66066316 -133563834 + AluY SINE Alu 71 297 -14 6952 132 35 32 chr5 66066316 66067244 -133562906 - Tigger3b DNA MER2_type -2090 938 1 2258 214 40 27 chr5 66067244 66067846 -133562304 - L1ME1 LINE L1 -1172 4974 4365 5487 53 1 3 chr5 66067855 66068548 -133561602 + L1PA8 LINE L1 5480 6171 -1 447 207 132 8 chr5 66068554 66068675 -133561475 - L1MC2 LINE L1 -5 6339 6204 * 1058 190 11 14 chr5 66068645 66068890 -133561260 - L1MB5 LINE L1 -277 5897 5686 401 285 36 26 chr5 66068891 66069084 -133561066 - MLT1F1-int LTR MaLR -1175 196 2 1558 208 204 35 chr5 66069086 66069571 -133560579 - MLT1F1 LTR MaLR 0 567 1 198 205 0 26 chr5 66069635 66069674 -133560476 + MIR3 SINE MIR 147 184 -24 2387 95 0 0 chr5 66069761 66070067 -133560083 + AluSx SINE Alu 1 306 -6 271 206 228 33 chr5 66070259 66070351 -133559799 + Charlie7 DNA MER1_type 1 110 -2502 241 235 69 20 chr5 66070398 66070500 -133559650 + Charlie7 DNA MER1_type 2506 2612 0 10905 63 14 0 chr5 66070532 66072712 -133557438 - L1PA6 LINE L1 -11 6143 3935 12420 94 3 6 chr5 66072712 66074481 -133555669 - L1PA6 LINE L1 -2979 3167 1405 456 216 10 10 chr5 66074617 66074714 -133555436 - HERV16 LTR ERVL -4015 981 885 1087 192 43 34 chr5 66074715 66074949 -133555201 + MLT2D LTR ERVL 179 414 0 487 337 10 46 chr5 66074953 66075149 -133555001 - HERV16 LTR ERVL -3459 1537 1349 1246 211 52 33 chr5 66075219 66075584 -133554566 - MSTB1 LTR MaLR 0 432 61 290 269 244 13 chr5 66076636 66076792 -133553358 - L2 LINE L2 0 3313 3122 586 270 111 31 chr5 66077082 66077308 -133552842 + MIR SINE MIR 15 258 -4 733 181 16 0 chr5 66077614 66077741 -133552409 - FLAM_A SINE Alu -4 129 1 496 352 31 0 chr5 66078021 66078183 -133551967 + MIR3 SINE MIR 28 194 -14 27 0 0 0 chr5 66078274 66078301 -133551849 + AT_rich Low_complexity Low_complexity 1 27 0 230 279 0 0 chr5 66078679 66078722 -133551428 + L2 LINE L2 3214 3256 -16 858 283 119 84 chr5 66079009 66079792 -133550358 + L1ME1 LINE L1 4 832 -5287 1911 134 7 23 chr5 66079792 66080091 -133550059 - AluSx SINE Alu -18 294 1 858 283 119 84 chr5 66080091 66080311 -133549839 + L1ME1 LINE L1 832 1043 -5076 837 98 0 0 chr5 66081828 66081940 -133548210 + AluSp/q SINE Alu 193 304 -9 635 268 153 13 chr5 66083256 66083484 -133546666 - MIR SINE MIR -1 261 2 324 222 65 9 chr5 66083607 66083715 -133546435 + L1MC5 LINE L1 7813 7926 -35 3072 232 79 9 chr5 66084145 66085697 -133544453 + L1ME1 LINE L1 4512 6317 0 199 196 176 0 chr5 66086387 66086438 -133543712 - L2 LINE L2 -1 3312 3253 222 307 62 105 chr5 66086503 66086904 -133543246 - L2 LINE L2 -81 3191 2808 2651 30 0 0 chr5 66087041 66087340 -133542810 - AluY SINE Alu -12 299 1 324 0 0 0 chr5 66087787 66087823 -133542327 + (TG)n Simple_repeat Simple_repeat 2 37 0 22 35 0 0 chr5 66088742 66088771 -133541379 + AT_rich Low_complexity Low_complexity 1 29 0 180 184 0 0 chr5 66089302 66089351 -133540799 + (TA)n Simple_repeat Simple_repeat 2 50 0 538 362 109 43 chr5 66089601 66090211 -133539939 - L2 LINE L2 -12 3260 2618 1777 161 0 17 chr5 66090773 66091071 -133539079 + AluJo SINE Alu 1 293 -19 2665 90 3 3 chr5 66091097 66091452 -133538698 - THE1A LTR MaLR 0 355 1 348 259 36 0 chr5 66091536 66091648 -133538502 + L1ME4a LINE L1 5938 6053 -68 2196 121 0 9 chr5 66092603 66092918 -133537232 + AluSx SINE Alu 1 312 0 334 339 106 0 chr5 66092952 66093235 -133536915 - L1ME LINE L1 -349 5772 5460 1367 197 31 31 chr5 66093337 66093655 -133536495 - AluJo SINE Alu 0 318 1 276 250 102 57 chr5 66094249 66094337 -133535813 - L2 LINE L2 -12 3260 3169 195 222 0 0 chr5 66096785 66096830 -133533320 + A-rich Low_complexity Low_complexity 1 45 0 211 260 20 0 chr5 66097467 66097517 -133532633 + CT-rich Low_complexity Low_complexity 1 51 0 2208 124 0 0 chr5 66097629 66097928 -133532222 + AluSx SINE Alu 1 299 -13 269 228 65 11 chr5 66097928 66098020 -133532130 - L1ME4a LINE L1 -28 6888 6792 351 244 145 51 chr5 66098083 66098317 -133531833 - L1ME4a LINE L1 -124 6792 6537 350 285 35 21 chr5 66098326 66098470 -133531680 - L1ME4a LINE L1 -435 6481 6336 22 0 0 0 chr5 66098578 66098600 -133531550 + AT_rich Low_complexity Low_complexity 1 22 0 1642 167 15 0 chr5 66099148 66099411 -133530739 - AluJo SINE Alu -17 295 29 1125 163 313 29 chr5 66099570 66099608 -133530542 - Charlie1b DNA MER1_type -2238 523 497 2104 158 0 12 chr5 66099608 66099949 -133530201 + MER1B DNA MER1_type 1 337 0 1125 163 313 29 chr5 66099949 66100315 -133529835 - Charlie1b DNA MER1_type -2264 497 1 180 0 0 0 chr5 66100650 66100670 -133529480 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2066 106 0 7 chr5 66100670 66100952 -133529198 - AluSq SINE Alu -33 280 1 433 185 194 19 chr5 66101012 66101120 -133529030 - MIR SINE MIR -42 220 94 4544 227 66 13 chr5 66101370 66102712 -133527438 - L1ME4a LINE L1 -764 6177 4790 1590 125 57 25 chr5 66102715 66102994 -133527156 + THE1C LTR MaLR 4 291 -84 975 178 69 0 chr5 66103000 66103174 -133526976 - L1MC/D LINE L1 -672 5672 5487 * 1558 228 0 0 chr5 66103169 66103485 -133526665 - L1ME4a LINE L1 -2311 4630 4315 1179 253 17 17 chr5 66103508 66103830 -133526320 - L1MCc LINE L1 -5742 680 10 237 83 0 0 chr5 66103859 66103895 -133526255 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 484 31 0 0 chr5 66103898 66103962 -133526188 - L1PA3 LINE L1 -3 6152 6089 2534 236 58 32 chr5 66103964 66104896 -133525254 - L1MDa LINE L1 -4078 2328 1373 1293 244 64 36 chr5 66104900 66105371 -133524779 - L1MDa LINE L1 -5151 1258 775 2098 130 3 3 chr5 66105422 66105722 -133524428 - AluSp SINE Alu -13 300 1 1892 154 14 3 chr5 66107924 66108217 -133521933 + AluJo SINE Alu 1 296 -16 290 325 61 9 chr5 66108688 66108802 -133521348 - MIR SINE MIR -73 189 70 2319 84 0 3 chr5 66109015 66109313 -133520837 - AluY SINE Alu -14 297 1 749 239 117 5 chr5 66109470 66109675 -133520475 + MIR SINE MIR 28 255 -7 252 303 9 0 chr5 66110732 66110841 -133519309 - L1ME LINE L1 -240 5881 5772 811 194 35 10 chr5 66110967 66111168 -133518982 - L1ME2 LINE L1 0 6164 5959 286 269 21 21 chr5 66111181 66111274 -133518876 - L1ME LINE L1 -527 5594 5502 326 68 0 0 chr5 66111489 66111533 -133518617 - AluSx SINE Alu -3 299 256 1585 113 0 0 chr5 66111539 66111751 -133518399 - AluSx SINE Alu -100 212 1 304 331 50 29 chr5 66111777 66112019 -133518131 - L1ME LINE L1 -918 5228 4982 269 237 13 0 chr5 66112158 66112234 -133517916 - L1ME LINE L1 -1329 4817 4741 333 278 30 37 chr5 66113045 66113172 -133516978 - MIR SINE MIR -52 156 27 936 251 40 0 chr5 66113661 66113908 -133516242 + MIR SINE MIR 6 262 0 272 274 4 37 chr5 66115229 66115386 -133514764 + T-rich Low_complexity Low_complexity 1 151 0 13820 200 37 16 chr5 66115718 66120313 -133509837 - L1MA4 LINE L1 -5 6997 2499 2107 142 0 10 chr5 66120313 66120622 -133509528 - AluSx SINE Alu -6 306 1 13820 200 37 16 chr5 66120622 66121364 -133508786 - L1MA4 LINE L1 -4503 2499 1774 285 29 0 0 chr5 66121364 66121398 -133508752 + (CA)n Simple_repeat Simple_repeat 2 35 0 13820 200 37 16 chr5 66121398 66122141 -133508009 - L1MA4 LINE L1 -5228 1774 818 21 71 0 0 chr5 66123074 66123116 -133507034 + AT_rich Low_complexity Low_complexity 1 42 0 2980 169 39 43 chr5 66123178 66123280 -133506870 + L1MC3 LINE L1 7113 7214 -571 892 92 23 0 chr5 66123280 66123410 -133506740 + L1PA14 LINE L1 6020 6152 -9 611 13 0 13 chr5 66123417 66123494 -133506656 + (GAAA)n Simple_repeat Simple_repeat 2 77 0 2980 169 39 43 chr5 66123494 66123861 -133506289 + L1MC3 LINE L1 7220 7589 -196 1554 196 12 52 chr5 66123861 66124080 -133506070 - MLT1B LTR MaLR -2 388 191 2474 59 0 3 chr5 66124080 66124384 -133505766 - AluY SINE Alu -8 303 1 1554 196 12 52 chr5 66124384 66124568 -133505582 - MLT1B LTR MaLR -199 191 1 2980 169 39 43 chr5 66124568 66124765 -133505385 + L1MC3 LINE L1 7589 7785 0 342 315 40 35 chr5 66124894 66125094 -133505056 + L1M4 LINE L1 4903 5103 -1043 2060 164 22 54 chr5 66125403 66125849 -133504301 - MSTB1 LTR MaLR 0 432 1 1462 166 49 100 chr5 66125924 66126315 -133503835 + MLT1A2 LTR MaLR 4 374 0 253 285 139 46 chr5 66126396 66126547 -133503603 - MIR SINE MIR -55 153 24 218 318 28 28 chr5 66126602 66126709 -133503441 - L2 LINE L2 -208 3064 2958 220 266 7 136 chr5 66127428 66127534 -133502616 - L2 LINE L2 0 3313 3231 992 167 37 0 chr5 66127534 66127696 -133502454 + FAM SINE Alu 1 168 -7 220 266 7 136 chr5 66127696 66127743 -133502407 - L2 LINE L2 -82 3231 3180 263 306 92 52 chr5 66127903 66128132 -133502018 - L2 LINE L2 -353 2961 2724 528 286 77 38 chr5 66128436 66128723 -133501427 + MARNA DNA Mariner 95 392 -194 206 326 144 23 chr5 66128951 66129083 -133501067 + L2 LINE L2 3123 3270 -2 231 282 183 23 chr5 66129120 66129251 -133500899 + L3b LINE CR1 1176 1327 -256 514 301 20 20 chr5 66129307 66129460 -133500690 + MER5B DNA MER1_type 9 161 -17 198 314 0 0 chr5 66129878 66129929 -133500221 - L2 LINE L2 -47 3225 3175 21 57 0 0 chr5 66130293 66130328 -133499822 + AT_rich Low_complexity Low_complexity 1 35 0 328 86 49 55 chr5 66130653 66130816 -133499334 + (TA)n Simple_repeat Simple_repeat 1 162 0 662 200 0 0 chr5 66132812 66132922 -133497228 + FLAM_A SINE Alu 6 115 -27 189 0 0 0 chr5 66132925 66132946 -133497204 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2338 79 0 3 chr5 66133493 66133784 -133496366 + AluSg SINE Alu 2 291 -19 35 24 0 0 chr5 66135173 66135215 -133494935 + AT_rich Low_complexity Low_complexity 1 42 0 2434 99 3 0 chr5 66135540 66135852 -133494298 - AluSp SINE Alu 0 313 1 371 139 15 197 chr5 66136031 66136168 -133493982 + MER5A DNA MER1_type 1 112 -77 190 209 70 0 chr5 66136169 66136212 -133493938 - MER5A DNA MER1_type -34 155 110 257 281 44 26 chr5 66136212 66136326 -133493824 + L1ME3A LINE L1 5555 5670 -500 286 273 0 0 chr5 66136362 66136450 -133493700 + L1ME3A LINE L1 5750 5837 -333 365 253 0 0 chr5 66138916 66138995 -133491155 + MER63 DNA MER1_type 672 750 -86 23 54 0 0 chr5 66139410 66139447 -133490703 + AT_rich Low_complexity Low_complexity 1 37 0 2167 114 0 10 chr5 66139845 66139980 -133490170 + AluSx SINE Alu 1 136 -176 2349 99 3 3 chr5 66139980 66140283 -133489867 + AluSp SINE Alu 1 303 -10 2167 114 0 10 chr5 66140283 66140454 -133489696 + AluSx SINE Alu 136 304 -8 23 0 0 0 chr5 66140454 66140477 -133489673 + AT_rich Low_complexity Low_complexity 1 23 0 2549 60 0 0 chr5 66140477 66140778 -133489372 + AluY SINE Alu 1 301 -10 1800 231 40 115 chr5 66141156 66142217 -133487933 + L2 LINE L2 2332 3311 -2 211 291 27 55 chr5 66142520 66142630 -133487520 + MIR SINE MIR 92 198 -64 786 270 60 21 chr5 66142680 66142913 -133487237 - MIR SINE MIR -8 254 13 229 219 43 195 chr5 66144713 66144877 -133485273 - MER5A DNA MER1_type -16 173 35 197 279 79 100 chr5 66144754 66144894 -133485256 + MER5A DNA MER1_type 50 186 -3 * 447 297 0 0 chr5 66146137 66146238 -133483912 - MER91B DNA MER1_type 0 190 90 325 221 25 98 chr5 66146254 66146376 -133483774 - MER91B DNA MER1_type -61 129 17 5974 68 1 30 chr5 66146935 66147738 -133482412 + LTR17 LTR ERV1 1 780 0 225 313 0 0 chr5 66149481 66149545 -133480605 + MIR SINE MIR 52 115 -147 322 243 250 14 chr5 66150144 66150288 -133479862 - MER5B DNA MER1_type 0 178 1 380 191 153 15 chr5 66152477 66152608 -133477542 - L1ME4a LINE L1 -2 6119 5971 1724 152 10 17 chr5 66153475 66153765 -133476385 - AluJb SINE Alu -24 288 1 579 220 34 17 chr5 66155353 66155530 -133474620 + L1ME3A LINE L1 5989 6168 -2 589 206 0 0 chr5 66155739 66155865 -133474285 + L1MD3 LINE L1 7834 7959 -36 2318 92 0 10 chr5 66156287 66156591 -133473559 + AluSq SINE Alu 1 301 -12 276 281 175 0 chr5 66156658 66156772 -133473378 - MIR SINE MIR -10 252 119 244 304 11 33 chr5 66159013 66159105 -133471045 - MER5A DNA MER1_type -99 90 1 263 225 85 101 chr5 66159105 66159234 -133470916 - L1MC4 LINE L1 -295 7747 7621 784 281 83 0 chr5 66160378 66160606 -133469544 - MIR SINE MIR -2 260 14 1215 126 0 0 chr5 66160705 66160872 -133469278 - AluSg/x SINE Alu -9 303 137 23 0 0 0 chr5 66160883 66160906 -133469244 + AT_rich Low_complexity Low_complexity 1 23 0 332 324 198 22 chr5 66161213 66161995 -133468155 + L2 LINE L2 1299 2218 -1096 2172 107 3 0 chr5 66162076 66162365 -133467785 - AluSg SINE Alu -20 290 1 1957 161 0 34 chr5 66162607 66162930 -133467220 - AluSx SINE Alu 0 312 1 916 152 18 24 chr5 66162979 66163143 -133467007 + AluSg/x SINE Alu 129 291 -19 1794 298 76 54 chr5 66163377 66163448 -133466702 + L2 LINE L2 1920 1988 -1325 2187 112 3 3 chr5 66163448 66163744 -133466406 + AluSg SINE Alu 1 296 -14 1794 298 76 54 chr5 66163744 66165052 -133465098 + L2 LINE L2 1988 3313 0 1191 281 87 40 chr5 66165354 66165885 -133464265 - LTR67 LTR ERVL 0 557 2 306 330 53 86 chr5 66166177 66166556 -133463594 + L2 LINE L2 2830 3193 -79 2161 121 3 3 chr5 66166556 66166862 -133463288 - AluSx SINE Alu -6 306 1 306 330 53 86 chr5 66166862 66166936 -133463214 + L2 LINE L2 3193 3268 -4 432 313 11 103 chr5 66166968 66167230 -133462920 - MIR SINE MIR -12 250 13 1720 171 149 26 chr5 66167484 66167642 -133462508 - MLT1C LTR MaLR 0 467 330 2250 186 3 6 chr5 66167642 66168008 -133462142 - MLT1A1 LTR MaLR 0 365 1 1720 171 149 26 chr5 66168008 66168264 -133461886 - MLT1C LTR MaLR -137 330 2 245 250 0 0 chr5 66168269 66168321 -133461829 + L2 LINE L2 3211 3262 -10 265 250 59 0 chr5 66168985 66169053 -133461097 - L1ME3A LINE L1 -94 6076 6005 1614 278 73 13 chr5 66169171 66170156 -133459994 - L1ME3A LINE L1 -211 5951 4906 14697 172 36 52 chr5 66170202 66170702 -133459448 - L1MA4A LINE L1 -25 6980 6473 268 89 0 0 chr5 66170702 66170747 -133459403 - LTR66 LTR ERVL -172 438 394 14697 172 36 52 chr5 66170747 66171767 -133458383 - L1MA4A LINE L1 -532 6473 5438 1623 148 81 47 chr5 66171767 66172064 -133458086 - AluJo SINE Alu -3 309 3 14697 172 36 52 chr5 66172064 66172741 -133457409 - L1MA4A LINE L1 -1567 5438 4751 2060 125 7 7 chr5 66172741 66173036 -133457114 - AluSg SINE Alu -15 295 1 14697 172 36 52 chr5 66173036 66174954 -133455196 - L1MA4A LINE L1 -2254 4751 2878 2470 94 18 0 chr5 66174967 66175295 -133454855 - L1PA13 LINE L1 -10 6153 5820 903 183 0 0 chr5 66175328 66175519 -133454631 - L1MA4A LINE L1 -4026 2823 2633 747 312 11 0 chr5 66175518 66175704 -133454446 + L1M2 LINE L1 1196 1383 -5466 * 2776 154 14 2 chr5 66175704 66176127 -133454023 + MSTA LTR MaLR 1 428 0 4124 151 36 47 chr5 66176137 66176605 -133453545 + MSTA-int LTR MaLR 12 470 -1181 2004 137 10 10 chr5 66176605 66176897 -133453253 - AluSq SINE Alu -21 292 1 4124 151 36 47 chr5 66176897 66177195 -133452955 + MSTA-int LTR MaLR 470 770 -881 792 133 161 0 chr5 66177209 66177352 -133452798 + MSTA LTR MaLR 263 428 0 188 216 39 0 chr5 66177352 66177403 -133452747 - L2 LINE L2 -224 3048 2996 801 260 60 17 chr5 66177680 66177915 -133452235 + MIR SINE MIR 18 262 0 197 242 0 61 chr5 66178020 66178086 -133452064 - L2 LINE L2 -968 2346 2285 228 322 130 31 chr5 66178220 66178481 -133451669 - L2 LINE L2 -181 3091 2805 436 240 111 58 chr5 66179366 66179537 -133450613 + MIR SINE MIR 35 214 -48 21 36 0 0 chr5 66179895 66179923 -133450227 + AT_rich Low_complexity Low_complexity 1 28 0 2338 203 9 44 chr5 66180666 66180996 -133449154 - L1MD3 LINE L1 -10 7985 7680 2464 93 0 0 chr5 66180996 66181298 -133448852 - AluSx SINE Alu -10 302 1 2338 203 9 44 chr5 66181298 66181518 -133448632 - L1MD3 LINE L1 -315 7680 7454 1563 264 29 55 chr5 66181534 66181766 -133448384 + L2 LINE L2 2134 2370 -944 2205 115 3 6 chr5 66181766 66182079 -133448071 + AluSx SINE Alu 1 312 0 1563 264 29 55 chr5 66182079 66182392 -133447758 + L2 LINE L2 2370 2665 -649 279 295 39 0 chr5 66182437 66182515 -133447635 + L2 LINE L2 2875 2955 -358 * 545 312 195 22 chr5 66182489 66183028 -133447122 + L2 LINE L2 2346 2977 -337 21 0 0 0 chr5 66183312 66183333 -133446817 + AT_rich Low_complexity Low_complexity 1 21 0 273 246 0 0 chr5 66183619 66183676 -133446474 + L2 LINE L2 3257 3313 0 329 340 37 4 chr5 66185575 66185730 -133444420 + L1ME LINE L1 5607 5715 -406 228 67 0 0 chr5 66186392 66186422 -133443728 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 274 321 124 47 chr5 66187812 66187891 -133442259 - MIR SINE MIR -14 248 177 2218 104 0 0 chr5 66187891 66188200 -133441950 - AluSx SINE Alu 0 311 3 274 321 124 47 chr5 66188200 66188311 -133441839 - MIR SINE MIR -85 177 41 370 294 122 11 chr5 66189296 66189476 -133440674 + MIR SINE MIR 21 220 -42 456 347 37 21 chr5 66189967 66190209 -133439941 - MIR SINE MIR 0 262 17 260 257 188 0 chr5 66191130 66191231 -133438919 - MIR SINE MIR -12 250 131 547 216 50 65 chr5 66191320 66191519 -133438631 + MIR3 SINE MIR 4 199 -9 924 218 176 76 chr5 66191827 66191906 -133438244 - MLT1H1 LTR MaLR 0 555 485 2167 122 0 0 chr5 66191906 66192202 -133437948 + AluSx SINE Alu 1 296 -16 924 218 176 76 chr5 66192202 66192594 -133437556 - MLT1H1 LTR MaLR -70 485 37 435 87 0 0 chr5 66192695 66192764 -133437386 + (TC)n Simple_repeat Simple_repeat 2 70 0 216 67 0 0 chr5 66192766 66192796 -133437354 + (CA)n Simple_repeat Simple_repeat 1 30 0 547 208 271 0 chr5 66194119 66194263 -133435887 - MER5A DNA MER1_type 0 189 7 195 42 0 0 chr5 66194287 66194311 -133435839 + (A)n Simple_repeat Simple_repeat 1 24 0 27 29 0 0 chr5 66194976 66195010 -133435140 + AT_rich Low_complexity Low_complexity 1 34 0 208 234 21 0 chr5 66195522 66195569 -133434581 + GA-rich Low_complexity Low_complexity 1 48 0 198 167 0 0 chr5 66196388 66196424 -133433726 + (CA)n Simple_repeat Simple_repeat 2 37 0 386 202 0 11 chr5 66197506 66197600 -133432550 + CT-rich Low_complexity Low_complexity 1 93 0 278 103 0 0 chr5 66198048 66198087 -133432063 - MADE1 DNA Mariner 0 80 42 1923 131 18 0 chr5 66198109 66198429 -133431721 - AluSx SINE Alu 0 328 4 769 206 0 8 chr5 66199275 66199406 -133430744 - FLAM_C SINE Alu -12 131 2 22 35 0 0 chr5 66200139 66200168 -133429982 + AT_rich Low_complexity Low_complexity 1 29 0 274 288 131 11 chr5 66200422 66200567 -133429583 + MIR SINE MIR 20 181 -69 297 362 112 0 chr5 66200995 66201111 -133429039 - L2 LINE L2 -2 3270 3142 641 241 142 6 chr5 66201124 66201286 -133428864 + MER5A DNA MER1_type 4 187 -2 2128 183 79 23 chr5 66201407 66201849 -133428301 - MLT1C LTR MaLR 0 467 1 2230 103 10 3 chr5 66201883 66202193 -133427957 + AluSq SINE Alu 1 312 -1 633 191 108 51 chr5 66203455 66203612 -133426538 - MER58C DNA MER1_type -13 202 37 2011 149 3 7 chr5 66205842 66206151 -133423999 - AluJo SINE Alu 0 312 5 255 342 0 0 chr5 66207054 66207133 -133423017 + MIR3 SINE MIR 124 202 -6 406 296 165 52 chr5 66207286 66207692 -133422458 - L2 LINE L2 -4 3268 2817 296 375 97 19 chr5 66208055 66208521 -133421629 - L2 LINE L2 -575 2739 2238 468 329 56 26 chr5 66208635 66208866 -133421284 + MLT1J LTR MaLR 274 511 0 2126 152 29 29 chr5 66208983 66209358 -133420792 + THE1C LTR MaLR 1 375 0 630 233 96 32 chr5 66209521 66209740 -133420410 + L1ME3A LINE L1 5917 6149 -21 25 0 0 0 chr5 66209753 66209778 -133420372 + AT_rich Low_complexity Low_complexity 1 25 0 11590 149 97 12 chr5 66210038 66212035 -133418115 + L1M1 LINE L1 12 2177 -5388 5117 102 57 5 chr5 66212035 66212789 -133417361 + L1MA3 LINE L1 5513 6305 0 22 0 0 0 chr5 66212789 66212811 -133417339 + AT_rich Low_complexity Low_complexity 1 22 0 327 335 55 51 chr5 66212952 66213209 -133416941 + HAL1b LINE L1 99 356 -992 2436 65 14 0 chr5 66213469 66213762 -133416388 + AluSp SINE Alu 1 297 -16 975 178 6 13 chr5 66214243 66214400 -133415750 + FAM SINE Alu 1 156 -19 627 169 76 0 chr5 66214660 66214778 -133415372 + MER3 DNA MER1_type 2 128 -81 523 127 28 177 chr5 66214766 66214824 -133415326 + MER3 DNA MER1_type 2471 2536 -88 * 28 29 0 0 chr5 66214824 66214859 -133415291 + AT_rich Low_complexity Low_complexity 1 35 0 523 127 28 177 chr5 66214859 66214947 -133415203 + MER3 DNA MER1_type 2536 2624 0 1879 215 69 23 chr5 66214963 66215525 -133414625 + L1ME4a LINE L1 5329 5916 -205 245 256 60 60 chr5 66215964 66216081 -133414069 - MIR SINE MIR -28 234 118 497 257 35 53 chr5 66216157 66216328 -133413822 + MIR SINE MIR 60 227 -35 2456 81 0 0 chr5 66217188 66217498 -133412652 + AluY SINE Alu 1 310 -1 3145 186 28 2 chr5 66217543 66218086 -133412064 - MER41D LTR ERV1 0 557 1 258 228 18 0 chr5 66218252 66218309 -133411841 - L2 LINE L2 -18 3254 3197 346 236 11 0 chr5 66219757 66219846 -133410304 + MER53 DNA DNA 100 189 0 28 61 0 0 chr5 66220462 66220511 -133409639 + GC_rich Low_complexity Low_complexity 1 49 0 252 352 74 49 chr5 66221534 66221818 -133408332 + L3 LINE CR1 1050 1340 -237 774 303 141 14 chr5 66222552 66222998 -133407152 + L2 LINE L2 2034 2536 -778 294 269 105 87 chr5 66223169 66223560 -133406590 + MLT1K LTR MaLR 189 586 -2 380 353 96 9 chr5 66223755 66223973 -133406177 + L2 LINE L2 2842 3078 -194 2264 141 30 0 chr5 66224181 66224514 -133405636 + MER2 DNA MER2_type 1 343 -1 2117 126 7 0 chr5 66224596 66224890 -133405260 - AluSx SINE Alu -16 296 1 232 333 71 44 chr5 66225152 66225335 -133404815 + L2 LINE L2 2808 2995 -277 215 315 22 22 chr5 66225509 66225598 -133404552 - MIR SINE MIR -127 135 47 1997 73 4 0 chr5 66225608 66225853 -133404297 - AluSp SINE Alu -67 246 1 4979 161 47 9 chr5 66226236 66227428 -133402722 - L1MB5 LINE L1 -36 6374 5138 1926 211 126 19 chr5 66227423 66227945 -133402205 - L1MB5 LINE L1 -1763 4619 4042 * 1407 202 55 17 chr5 66227943 66228359 -133401791 + L1M4c LINE L1 2006 2437 -3947 * 1502 200 66 40 chr5 66228362 66228826 -133401324 - L1MB5 LINE L1 -4488 1896 1309 927 196 27 22 chr5 66228818 66229043 -133401107 + L1M4 LINE L1 1174 1399 -5143 * 1985 176 69 26 chr5 66229041 66229462 -133400688 + L1M4 LINE L1 738 1176 -5366 1087 270 98 50 chr5 66229461 66229773 -133400377 - L1M4 LINE L1 -6036 506 161 * 2171 105 0 3 chr5 66229773 66230069 -133400081 + AluSg SINE Alu 1 295 -15 1087 270 98 50 chr5 66230069 66230238 -133399912 - L1M4 LINE L1 -6381 161 2 2260 74 0 13 chr5 66230390 66230689 -133399461 + AluSc SINE Alu 1 295 -14 249 139 0 0 chr5 66231063 66231106 -133399044 + (A)n Simple_repeat Simple_repeat 1 43 0 2307 104 0 0 chr5 66231512 66231810 -133398340 - AluSg SINE Alu -12 298 1 768 229 68 0 chr5 66232039 66232231 -133397919 - MIR SINE MIR 0 262 58 1965 114 36 7 chr5 66232256 66232537 -133397613 + AluSx SINE Alu 1 289 -23 335 325 82 20 chr5 66233368 66233623 -133396527 - L1M4 LINE L1 -3317 2829 2559 21 71 0 0 chr5 66233838 66233880 -133396270 + AT_rich Low_complexity Low_complexity 1 42 0 2424 97 0 0 chr5 66233886 66234197 -133395953 - AluY SINE Alu 0 311 1 412 263 31 50 chr5 66234209 66234468 -133395682 - L1M4 LINE L1 -3783 2363 2110 195 42 0 0 chr5 66234514 66234538 -133395612 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 3221 237 37 49 chr5 66234660 66235712 -133394438 - L1M4 LINE L1 -1510 4636 3598 877 156 0 8 chr5 66236212 66236340 -133393810 + FLAM_C SINE Alu 1 127 -6 1291 293 85 45 chr5 66236510 66236711 -133393439 + HERV16 LTR ERVL 1048 1239 -3757 1667 202 79 9 chr5 66236711 66237052 -133393098 + MLT1A1 LTR MaLR 1 365 0 2243 166 43 19 chr5 66237054 66237476 -133392674 + MSTB1 LTR MaLR 1 432 0 1291 293 85 45 chr5 66237476 66237742 -133392408 + HERV16 LTR ERVL 1239 1537 -3459 1109 192 43 34 chr5 66237746 66237980 -133392170 - MLT2D LTR ERVL 0 414 179 623 219 12 50 chr5 66237981 66238141 -133392009 + HERV16 LTR ERVL 885 1038 -3958 1045 167 0 6 chr5 66238205 66238379 -133391771 - MLT2D LTR ERVL -241 173 1 1671 276 99 44 chr5 66238382 66238789 -133391361 + ERVL LTR ERVL 1612 2072 -2924 2220 168 0 29 chr5 66238789 66239165 -133390985 - MLT1A1 LTR MaLR 0 365 1 1671 276 99 44 chr5 66239165 66239420 -133390730 + ERVL LTR ERVL 2072 2311 -2685 413 264 129 7 chr5 66239402 66239542 -133390608 + ERVL LTR ERVL 3332 3488 -2276 * 871 306 84 66 chr5 66239581 66240758 -133389392 + ERVL LTR ERVL 3257 4454 -542 626 110 70 0 chr5 66240791 66240891 -133389259 + HY1 scRNA scRNA 1 107 -5 2576 71 0 0 chr5 66240908 66241217 -133388933 + AluY SINE Alu 1 309 -2 545 290 293 7 chr5 66241217 66241620 -133388530 - L3 LINE CR1 -476 1101 584 737 318 58 4 chr5 66241626 66241900 -133388250 + L3 LINE CR1 1043 1331 -246 1850 192 43 29 chr5 66241919 66242416 -133387734 + MER39 LTR ERV1 1 707 0 1577 171 59 0 chr5 66242516 66242690 -133387460 - AluJb SINE Alu -9 303 104 201 39 0 0 chr5 66242690 66242716 -133387434 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1577 171 59 0 chr5 66242716 66242827 -133387323 - AluJb SINE Alu -208 104 1 2187 107 6 28 chr5 66246553 66246870 -133383280 - AluSx SINE Alu -2 310 1 204 352 0 0 chr5 66247246 66247317 -133382833 - L3 LINE CR1 -264 1313 1243 1772 143 73 32 chr5 66247406 66247748 -133382402 - MLT1A1 LTR MaLR -9 356 1 1744 191 0 13 chr5 66247895 66248198 -133381952 + AluJo SINE Alu 1 299 -13 199 351 0 0 chr5 66248595 66248652 -133381498 - L2 LINE L2 -5 3267 3211 1887 158 0 13 chr5 66249012 66249323 -133380827 - AluJb SINE Alu -5 307 1 207 268 192 19 chr5 66249647 66249807 -133380343 - MIR3 SINE MIR -62 146 5 25 31 0 0 chr5 66250170 66250202 -133379948 + AT_rich Low_complexity Low_complexity 1 32 0 315 270 15 44 chr5 66252057 66252194 -133377956 - MLT1H LTR MaLR -376 173 41 2364 185 73 45 chr5 66252356 66252407 -133377743 - L1MB3 LINE L1 -1 6182 6134 2078 99 20 20 chr5 66252407 66252699 -133377451 - AluSx SINE Alu -20 292 1 2364 185 73 45 chr5 66252699 66253247 -133376903 - L1MB3 LINE L1 -49 6134 5566 211 224 69 0 chr5 66255416 66255474 -133374676 + MIR SINE MIR 92 153 -109 443 203 183 20 chr5 66255660 66255857 -133374293 + L1MC5 LINE L1 7701 7929 -32 2158 139 7 0 chr5 66256177 66256487 -133373663 - AluSq SINE Alu -1 312 1 2259 148 28 46 chr5 66256487 66256880 -133373270 - L1PA16 LINE L1 -12 6154 5769 6741 86 28 37 chr5 66256882 66257260 -133372890 - L1PA13 LINE L1 0 6163 5783 2412 83 7 0 chr5 66257260 66257562 -133372588 - AluSp SINE Alu -9 304 1 6741 86 28 37 chr5 66257562 66258928 -133371222 - L1PA13 LINE L1 -380 5783 4433 3610 124 3 5 chr5 66258937 66259512 -133370638 - L1PA16 LINE L1 -375 5791 5218 28 0 0 0 chr5 66259781 66259809 -133370341 + AT_rich Low_complexity Low_complexity 1 28 0 255 298 48 48 chr5 66260751 66260875 -133369275 + MARNA DNA Mariner 411 534 -52 541 278 47 12 chr5 66262554 66262723 -133367427 + MIR SINE MIR 84 258 -4 2325 76 3 20 chr5 66263669 66263970 -133366180 - AluY SINE Alu -15 296 1 857 168 0 0 chr5 66264706 66264843 -133365307 - FLAM_C SINE Alu -6 137 1 2511 81 0 0 chr5 66264901 66265209 -133364941 + AluSc SINE Alu 1 308 -1 2610 51 0 0 chr5 66265528 66265839 -133364311 + AluY SINE Alu 1 311 0 438 292 24 30 chr5 66270808 66270976 -133359174 + MIR SINE MIR 93 259 -3 204 163 0 23 chr5 66270978 66271021 -133359129 + (TTA)n Simple_repeat Simple_repeat 2 43 0 2267 121 0 0 chr5 66271347 66271654 -133358496 + AluSx SINE Alu 1 307 -5 729 307 12 17 chr5 66271940 66272181 -133357969 + MIR SINE MIR 2 241 -21 2253 148 9 0 chr5 66272684 66273029 -133357121 - MER7A DNA MER2_type 0 346 1 230 325 117 8 chr5 66273046 66273166 -133356984 - MIR SINE MIR -122 140 8 245 111 12 37 chr5 66273720 66273801 -133356349 + (CAAAA)n Simple_repeat Simple_repeat 3 81 0 271 308 119 84 chr5 66276825 66277228 -133352922 + L2 LINE L2 2856 3272 0 297 49 0 0 chr5 66277326 66277367 -133352783 - MADE1 DNA Mariner -5 75 35 2523 37 10 0 chr5 66277727 66278025 -133352125 - AluY SINE Alu -10 301 1 2396 94 3 0 chr5 66278075 66278373 -133351777 - AluSp SINE Alu -14 299 1 2033 148 3 0 chr5 66278456 66278759 -133351391 - AluJo SINE Alu -8 304 1 21 36 0 0 chr5 66279011 66279039 -133351111 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 66279071 66279092 -133351058 + AT_rich Low_complexity Low_complexity 1 21 0 411 245 170 19 chr5 66279881 66280040 -133350110 + MIR SINE MIR 13 195 -67 360 0 0 0 chr5 66280042 66280082 -133350068 + (CA)n Simple_repeat Simple_repeat 2 41 0 1860 169 0 3 chr5 66280342 66280632 -133349518 - AluJb SINE Alu -23 289 1 25 51 0 0 chr5 66280637 66280676 -133349474 + AT_rich Low_complexity Low_complexity 1 39 0 41208 32 26 2 chr5 66281439 66287446 -133342704 + L1PA2 LINE L1 1 6154 -1 557 261 85 0 chr5 66287729 66287882 -133342268 - MIR3 SINE MIR -14 194 29 894 114 15 0 chr5 66288270 66288401 -133341749 - FLAM_C SINE Alu 0 133 1 2427 78 0 0 chr5 66288411 66288706 -133341444 - AluY SINE Alu -16 295 1 2478 64 0 0 chr5 66289530 66289828 -133340322 + AluY SINE Alu 1 298 -13 183 287 172 0 chr5 66289833 66289920 -133340230 - MIR SINE MIR -112 150 49 2271 96 7 0 chr5 66291140 66291432 -133338718 + AluSc SINE Alu 1 294 -15 501 182 0 18 chr5 66291576 66291686 -133338464 + LTR2B LTR ERV1 383 490 0 39400 45 26 26 chr5 66291686 66297092 -133333058 + Harlequin LTR ERV1 1 5407 -1489 269 288 0 0 chr5 66297097 66297156 -133332994 - L2 LINE L2 -87 3185 3127 276 149 0 0 chr5 66297332 66297379 -133332771 + (CA)n Simple_repeat Simple_repeat 2 48 0 706 356 19 27 chr5 66297846 66298214 -133331936 + L2 LINE L2 2481 2845 -469 365 264 186 0 chr5 66298343 66298510 -133331640 - MIR SINE MIR -12 250 53 309 256 58 0 chr5 66298507 66298593 -133331557 - MIR SINE MIR -2 260 170 * 21 71 0 0 chr5 66298870 66298912 -133331238 + AT_rich Low_complexity Low_complexity 1 42 0 245 259 212 0 chr5 66298918 66299003 -133331147 - MIR SINE MIR -69 139 37 2101 113 23 23 chr5 66299562 66299864 -133330286 + AluSg SINE Alu 3 304 -6 310 300 12 0 chr5 66299895 66299975 -133330175 - MIR SINE MIR -32 230 150 201 95 0 48 chr5 66300112 66300154 -133329996 + (GAA)n Simple_repeat Simple_repeat 2 41 0 267 106 45 15 chr5 66300154 66300220 -133329930 + GA-rich Low_complexity Low_complexity 2 69 0 404 52 0 0 chr5 66300370 66300428 -133329722 + L1PA8 LINE L1 6115 6172 0 26 0 0 0 chr5 66300432 66300458 -133329692 + AT_rich Low_complexity Low_complexity 1 26 0 221 302 19 0 chr5 66301965 66302018 -133328132 - L2 LINE L2 -4 3268 3215 485 156 13 0 chr5 66302217 66302294 -133327856 - AluJ/FLAM SINE Alu -229 83 6 294 241 45 90 chr5 66306758 66306835 -133323315 + MIR SINE MIR 136 206 -56 821 232 33 38 chr5 66306835 66307046 -133323104 + MER63A DNA MER1_type 1 210 0 294 241 45 90 chr5 66307046 66307101 -133323049 + MIR SINE MIR 206 262 0 255 283 72 29 chr5 66307766 66307904 -133322246 + MLT1K LTR MaLR 445 588 0 244 240 20 0 chr5 66307910 66307960 -133322190 - L2 LINE L2 -5 3267 3217 380 296 38 57 chr5 66308668 66308942 -133321208 + L1ME4a LINE L1 5352 5618 -527 287 188 29 0 chr5 66309188 66309257 -133320893 + L1ME4a LINE L1 5938 6008 -113 2000 190 38 2 chr5 66309413 66309808 -133320342 + MER47B DNA MER2_type 1 409 -9 2453 44 47 3 chr5 66311489 66311787 -133318363 + AluY SINE Alu 1 311 0 487 231 15 15 chr5 66311872 66312002 -133318148 - MER104 DNA Tc2 -49 131 2 21 0 0 0 chr5 66313124 66313145 -133317005 + AT_rich Low_complexity Low_complexity 1 21 0 273 57 0 0 chr5 66314949 66314984 -133315166 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 888 152 7 0 chr5 66318489 66318634 -133311516 + FRAM SINE Alu 14 159 -17 24 53 0 0 chr5 66320913 66320951 -133309199 + AT_rich Low_complexity Low_complexity 1 38 0 383 264 58 25 chr5 66321546 66321667 -133308483 - MER119 DNA MER1_type 0 583 459 270 240 0 0 chr5 66321696 66321746 -133308404 - MER119 DNA MER1_type -480 103 54 1975 96 7 7 chr5 66321878 66322149 -133308001 + AluSx SINE Alu 36 306 -6 180 0 0 0 chr5 66322245 66322265 -133307885 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 363 89 0 0 chr5 66322264 66322320 -133307830 + (CA)n Simple_repeat Simple_repeat 1 56 0 32 0 0 0 chr5 66322775 66322807 -133307343 + AT_rich Low_complexity Low_complexity 1 32 0 822 214 11 11 chr5 66323668 66323846 -133306304 + MER5B DNA MER1_type 1 178 0 858 243 35 0 chr5 66324302 66324475 -133305675 + MER5A DNA MER1_type 9 187 -2 2606 23 3 0 chr5 66325596 66325896 -133304254 + AluY SINE Alu 1 301 -10 216 0 0 0 chr5 66326387 66326411 -133303739 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2127 130 0 9 chr5 66326745 66327060 -133303090 + AluSx SINE Alu 1 312 0 209 268 12 85 chr5 66327301 66327383 -133302767 - L2 LINE L2 -10 3262 3187 993 179 22 0 chr5 66327450 66327634 -133302516 - MER5A DNA MER1_type 0 189 2 222 118 0 0 chr5 66327838 66327872 -133302278 + (T)n Simple_repeat Simple_repeat 1 34 0 200 329 98 12 chr5 66328059 66328141 -133302009 - L3b LINE CR1 -9 1574 1486 192 298 96 21 chr5 66328208 66328302 -133301848 - L3b LINE CR1 -336 1247 1147 1799 164 24 0 chr5 66328785 66329072 -133301078 + AluJo SINE Alu 1 294 -18 21 0 0 0 chr5 66329080 66329101 -133301049 + AT_rich Low_complexity Low_complexity 1 21 0 315 240 70 70 chr5 66330615 66330715 -133299435 + MIR SINE MIR 89 188 -74 2344 160 94 16 chr5 66331495 66331996 -133298154 + L1MB5 LINE L1 5627 6166 -8 23 54 0 0 chr5 66332038 66332075 -133298075 + AT_rich Low_complexity Low_complexity 1 37 0 261 0 0 0 chr5 66332208 66332237 -133297913 + (CA)n Simple_repeat Simple_repeat 2 30 0 686 197 8 8 chr5 66333341 66333463 -133296687 - FLAM_A SINE Alu -11 122 1 5832 231 119 50 chr5 66333472 66333606 -133296544 + L1ME LINE L1 2371 2494 -3652 304 185 0 46 chr5 66333606 66333671 -133296479 - MADE1 DNA Mariner 0 80 19 5832 231 119 50 chr5 66333671 66334219 -133295931 + L1ME LINE L1 2494 3002 -3144 2268 71 0 10 chr5 66334219 66334516 -133295634 + AluY SINE Alu 1 294 -17 5832 231 119 50 chr5 66334516 66336230 -133293920 + L1ME LINE L1 3002 5004 -1142 26 30 0 0 chr5 66336454 66336487 -133293663 + AT_rich Low_complexity Low_complexity 1 33 0 801 214 107 4 chr5 66336488 66336942 -133293208 + L1ME LINE L1 4996 5589 -577 3149 159 60 3 chr5 66336943 66337558 -133292592 - L1MA9 LINE L1 0 6312 5659 2355 74 0 3 chr5 66337558 66337856 -133292294 - AluY SINE Alu -14 297 1 3149 159 60 3 chr5 66337856 66337874 -133292276 - L1MA9 LINE L1 -653 5659 5643 34 42 0 0 chr5 66340209 66340257 -133289893 + AT_rich Low_complexity Low_complexity 1 48 0 2131 111 10 0 chr5 66340350 66340639 -133289511 - AluSx SINE Alu -20 292 1 25 51 0 0 chr5 66340920 66340959 -133289191 + AT_rich Low_complexity Low_complexity 1 39 0 492 330 75 41 chr5 66341412 66341679 -133288471 - Charlie8 DNA MER1_type -2141 276 1 5405 228 129 21 chr5 66342209 66343843 -133286307 + L1M3c LINE L1 173 1917 -4466 365 261 82 11 chr5 66343868 66344052 -133286098 + L1M3c LINE L1 2025 2221 -4163 458 83 30 69 chr5 66344052 66344419 -133285731 + (TA)n Simple_repeat Simple_repeat 1 352 0 480 129 41 29 chr5 66344458 66344629 -133285521 + (TA)n Simple_repeat Simple_repeat 2 174 0 12649 182 57 25 chr5 66344629 66345582 -133284568 + L1MA9 LINE L1 2207 3128 -3420 1922 151 3 3 chr5 66345582 66345880 -133284270 + AluSx SINE Alu 1 298 -14 12649 182 57 25 chr5 66345880 66349125 -133281025 + L1MA9 LINE L1 3128 6548 0 3419 64 18 0 chr5 66349140 66349576 -133280574 + MLT2A1 LTR ERVL 1 444 0 1486 248 65 62 chr5 66349753 66350088 -133280062 + L1M3c LINE L1 2667 2999 -3383 1572 166 4 0 chr5 66350088 66350335 -133279815 - AluJo SINE Alu -64 248 1 1486 248 65 62 chr5 66350335 66350860 -133279290 + L1M3c LINE L1 2999 3521 -2861 1556 161 50 30 chr5 66350860 66351159 -133278991 + AluJo SINE Alu 1 305 -7 1486 248 65 62 chr5 66351159 66351553 -133278597 + L1M3c LINE L1 3521 4068 -2314 2029 133 3 0 chr5 66351553 66351847 -133278303 + AluJb SINE Alu 1 295 -17 1486 248 65 62 chr5 66351847 66351933 -133278217 + L1M3c LINE L1 4068 4152 -2230 * 2201 219 90 25 chr5 66351932 66352092 -133278058 + L1ME2 LINE L1 4181 4329 -1899 1826 138 11 0 chr5 66352092 66352361 -133277789 + AluJb SINE Alu 24 295 -17 2201 219 90 25 chr5 66352361 66352780 -133277370 + L1ME2 LINE L1 4329 4719 -1509 1937 61 0 0 chr5 66352780 66353026 -133277124 + L1PA5 LINE L1 5907 6152 -2 2201 219 90 25 chr5 66353026 66353923 -133276227 + L1ME2 LINE L1 4719 5892 -336 453 203 0 0 chr5 66353938 66354017 -133276133 - FLAM_A SINE Alu -63 79 1 589 221 120 101 chr5 66354019 66354213 -133275937 + L1ME2 LINE L1 5884 6088 -140 1552 198 54 17 chr5 66354213 66354562 -133275588 + MLT1A1 LTR MaLR 4 365 0 589 221 120 101 chr5 66354562 66354684 -133275466 + L1ME2 LINE L1 6088 6206 -22 310 259 38 101 chr5 66354737 66354895 -133275255 + L1MC4 LINE L1 7832 7979 -63 2330 107 0 0 chr5 66354971 66355279 -133274871 - AluSx SINE Alu -4 308 1 565 242 27 13 chr5 66358334 66358483 -133271667 - MIR SINE MIR -6 256 106 245 292 156 31 chr5 66358673 66358769 -133271381 + MIR SINE MIR 42 149 -59 * 332 338 181 10 chr5 66358767 66358971 -133271179 + MIR SINE MIR 16 254 -8 701 235 94 94 chr5 66358983 66359389 -133270761 + LTR33A LTR ERVL 9 492 -31 180 0 0 0 chr5 66359427 66359447 -133270703 + (CAT)n Simple_repeat Simple_repeat 2 21 0 958 231 28 0 chr5 66359507 66359723 -133270427 - MER58A DNA MER1_type 0 224 3 456 325 153 4 chr5 66359807 66360062 -133270088 - L3 LINE CR1 -1 1576 1284 734 306 178 26 chr5 66360171 66360554 -133269596 - L2 LINE L2 -9 3304 2864 264 309 53 0 chr5 66361249 66361343 -133268807 + MIR SINE MIR 43 141 -121 323 311 14 108 chr5 66361768 66361916 -133268234 + MER91A DNA MER1_type 63 196 0 1596 160 58 4 chr5 66362332 66362607 -133267543 + AluJb SINE Alu 1 290 -22 189 175 0 0 chr5 66362827 66362867 -133267283 + (TG)n Simple_repeat Simple_repeat 2 41 0 2200 212 123 32 chr5 66362870 66363534 -133266616 + MER50 LTR ERV1 10 734 0 525 342 51 26 chr5 66363963 66364197 -133265953 - MIR SINE MIR -16 246 7 1404 88 10 5 chr5 66366162 66366354 -133263796 - AluSq SINE Alu -119 194 2 42 0 0 0 chr5 66366354 66366396 -133263754 + AT_rich Low_complexity Low_complexity 1 42 0 22 56 0 0 chr5 66366414 66366450 -133263700 + AT_rich Low_complexity Low_complexity 1 36 0 1697 163 19 13 chr5 66366699 66367006 -133263144 - AluJb SINE Alu -3 309 1 2165 106 0 52 chr5 66367630 66367959 -133262191 - AluJb SINE Alu 0 312 1 180 161 32 0 chr5 66368737 66368768 -133261382 + L2 LINE L2 3224 3255 -17 542 269 99 31 chr5 66368847 66369070 -133261080 + MLT1L LTR MaLR 1 238 -377 1539 94 77 0 chr5 66369090 66369323 -133260827 - L1PB1 LINE L1 0 6151 5901 208 139 0 0 chr5 66369647 66369683 -133260467 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 834 179 14 0 chr5 66369690 66369830 -133260320 - FRAM SINE Alu -18 158 17 952 193 56 0 chr5 66369936 66370133 -133260017 - MER3 DNA MER1_type 0 209 2 228 67 0 0 chr5 66370771 66370801 -133259349 + (TC)n Simple_repeat Simple_repeat 2 31 0 773 163 0 22 chr5 66370808 66370943 -133259207 - FLAM_C SINE Alu 0 133 2 300 333 129 38 chr5 66370946 66371366 -133258784 + L2 LINE L2 611 1068 -2246 412 326 148 72 chr5 66371482 66371813 -133258337 + L2 LINE L2 2917 3272 0 2441 261 119 20 chr5 66371909 66372890 -133257260 - L2 LINE L2 -146 3167 2066 1816 94 10 71 chr5 66372890 66373224 -133256926 + AluSx SINE Alu 1 312 0 2441 261 119 20 chr5 66373224 66373257 -133256893 - L2 LINE L2 -1247 2066 2038 1540 265 157 36 chr5 66373413 66373668 -133256482 - L2 LINE L2 -953 2361 2138 1845 103 3 73 chr5 66373668 66374006 -133256144 + AluSx SINE Alu 1 317 0 1540 265 157 36 chr5 66374006 66374391 -133255759 - L2 LINE L2 -1176 2138 1642 1445 248 93 27 chr5 66374394 66374979 -133255171 - L2 LINE L2 -2607 707 2 26 64 0 0 chr5 66375450 66375497 -133254653 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr5 66375831 66375860 -133254290 + AT_rich Low_complexity Low_complexity 1 29 0 754 301 119 40 chr5 66378592 66379188 -133250962 + L2 LINE L2 2499 3141 -172 664 138 268 0 chr5 66379245 66379383 -133250767 - MER3 DNA MER1_type -26 183 9 208 365 0 0 chr5 66379390 66379453 -133250697 + L2 LINE L2 3251 3313 0 408 264 39 39 chr5 66380309 66380438 -133249712 - MIR3 SINE MIR -3 205 77 205 308 25 62 chr5 66381168 66381313 -133248837 + MIR SINE MIR 63 205 -57 504 287 94 22 chr5 66383855 66384078 -133246072 + MIR SINE MIR 2 240 -22 2196 109 0 7 chr5 66384078 66384381 -133245769 - AluSx SINE Alu -11 301 1 2094 103 34 0 chr5 66385395 66385686 -133244464 + AluSg SINE Alu 1 301 -9 608 227 0 15 chr5 66386644 66386776 -133243374 - FLAM_A SINE Alu -3 130 1 25 0 0 0 chr5 66386857 66386882 -133243268 + AT_rich Low_complexity Low_complexity 1 25 0 2005 119 0 30 chr5 66386929 66387232 -133242918 + AluJb SINE Alu 5 298 -14 25 0 0 0 chr5 66388671 66388696 -133241454 + AT_rich Low_complexity Low_complexity 1 25 0 207 0 0 0 chr5 66388962 66388985 -133241165 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2090 104 0 4 chr5 66388987 66389267 -133240883 - AluSg SINE Alu -29 281 3 790 186 42 48 chr5 66389360 66389527 -133240623 + FRAM SINE Alu 1 166 0 222 302 19 0 chr5 66389922 66389975 -133240175 - L2 LINE L2 -4 3268 3215 550 128 0 0 chr5 66390174 66390252 -133239898 - AluJ/FLAM SINE Alu -229 83 6 4720 130 21 8 chr5 66390540 66391299 -133238851 - L1PB3 LINE L1 -1 6153 5385 425 294 93 49 chr5 66391463 66391644 -133238506 - L1MEd LINE L1 -863 1627 1455 2039 149 0 3 chr5 66391644 66391945 -133238205 - AluJb SINE Alu -12 300 1 425 294 93 49 chr5 66391945 66392013 -133238137 - L1MEd LINE L1 -1035 1455 1391 2157 119 0 0 chr5 66392013 66392315 -133237835 - AluSx SINE Alu -8 304 3 425 294 93 49 chr5 66392315 66392538 -133237612 - L1MEd LINE L1 -1099 1391 1050 266 294 147 49 chr5 66392555 66392739 -133237411 - L1MEd LINE L1 -5366 753 552 356 250 108 61 chr5 66393580 66393728 -133236422 + L3 LINE CR1 1349 1503 -74 24 53 0 0 chr5 66394378 66394416 -133235734 + AT_rich Low_complexity Low_complexity 1 38 0 1074 121 0 13 chr5 66394796 66394953 -133235197 - MER4E LTR ERV1 0 779 625 * 4016 149 15 8 chr5 66394952 66395615 -133234535 - MER4D LTR ERV1 -235 668 1 186 43 0 0 chr5 66396155 66396178 -133233972 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 554 315 60 37 chr5 66396396 66396694 -133233456 - L3b LINE CR1 -106 1477 1173 27 49 0 0 chr5 66397042 66397083 -133233067 + AT_rich Low_complexity Low_complexity 1 41 0 399 316 26 0 chr5 66398088 66398205 -133231945 - L2 LINE L2 0 3313 3194 994 262 28 24 chr5 66398222 66398512 -133231638 - L2 LINE L2 -2 3311 3021 281 238 98 67 chr5 66398504 66398697 -133231453 - L2 LINE L2 -131 3182 2984 * 22 0 0 0 chr5 66399003 66399025 -133231125 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr5 66400139 66400162 -133229988 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr5 66400204 66400228 -133229922 + AT_rich Low_complexity Low_complexity 1 24 0 2227 100 3 0 chr5 66400230 66400530 -133229620 - AluSp SINE Alu -12 301 1 2290 92 0 19 chr5 66401003 66401318 -133228832 - AluSc SINE Alu 0 309 1 1930 130 32 0 chr5 66401953 66402238 -133227912 + AluSx SINE Alu 1 294 -18 2360 98 0 0 chr5 66402969 66403275 -133226875 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr5 66404541 66404564 -133225586 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 66405542 66405563 -133224587 + (CTAA)n Simple_repeat Simple_repeat 1 21 0 22 88 0 0 chr5 66405933 66405990 -133224160 + AT_rich Low_complexity Low_complexity 1 57 0 30 59 0 0 chr5 66406148 66406199 -133223951 + AT_rich Low_complexity Low_complexity 1 51 0 1772 159 35 0 chr5 66406920 66407210 -133222940 - AluJo SINE Alu -12 300 1 812 270 18 25 chr5 66407622 66407907 -133222243 - L1ME3A LINE L1 -224 5946 5664 502 103 26 0 chr5 66407913 66407991 -133222159 + MADE1 DNA Mariner 1 80 0 180 0 114 0 chr5 66410997 66411032 -133219118 + A-rich Low_complexity Low_complexity 2 40 0 25 51 0 0 chr5 66411644 66411683 -133218467 + AT_rich Low_complexity Low_complexity 1 39 0 189 346 92 20 chr5 66411852 66412005 -133218145 - MIR SINE MIR 0 262 99 302 361 83 8 chr5 66413113 66413246 -133216904 - MIR3 SINE MIR -62 146 4 2435 68 0 0 chr5 66413321 66413629 -133216521 - AluY SINE Alu -3 308 1 209 405 86 9 chr5 66414229 66414451 -133215699 - L2 LINE L2 -568 2746 2508 1942 149 0 10 chr5 66414504 66414806 -133215344 + AluSx SINE Alu 1 299 -13 521 110 61 14 chr5 66414806 66415095 -133215055 + (TA)n Simple_repeat Simple_repeat 1 302 0 705 231 218 0 chr5 66415544 66415760 -133214390 + Charlie2 DNA MER1_type 60 322 -2540 2645 209 97 51 chr5 66415807 66416723 -133213427 + Charlie2 DNA MER1_type 1905 2862 0 1604 178 7 0 chr5 66417152 66417428 -133212722 - AluJo SINE Alu -34 278 1 1220 250 59 18 chr5 66417520 66417976 -133212174 + L1MC4 LINE L1 7568 8042 0 21 0 0 0 chr5 66418238 66418259 -133211891 + AT_rich Low_complexity Low_complexity 1 21 0 297 208 0 0 chr5 66418457 66418534 -133211616 + (CA)n Simple_repeat Simple_repeat 2 78 0 1162 236 133 5 chr5 66418554 66418944 -133211206 + LTR40c LTR ERVL 5 444 -21 * 1283 212 77 13 chr5 66418923 66419234 -133210916 - Charlie1a DNA MER1_type -1098 357 27 979 262 105 21 chr5 66419238 66419843 -133210307 - L1M3 LINE L1 -512 5656 5006 515 97 0 0 chr5 66419843 66419915 -133210235 - L1MC/D LINE L1 -703 5630 5559 357 261 87 14 chr5 66421460 66421598 -133208552 + L1M4 LINE L1 4593 4740 -1406 3032 124 4 80 chr5 66421726 66422266 -133207884 - MER1A DNA MER1_type 0 529 31 243 0 0 0 chr5 66422277 66422304 -133207846 + (CA)n Simple_repeat Simple_repeat 2 28 0 1680 171 7 20 chr5 66422510 66422607 -133207543 + AluJb SINE Alu 1 98 -214 2515 135 41 7 chr5 66422607 66423021 -133207129 + MSTA LTR MaLR 1 428 0 1680 171 7 20 chr5 66423021 66423216 -133206934 + AluJb SINE Alu 98 289 -23 23 54 0 0 chr5 66423928 66423965 -133206185 + AT_rich Low_complexity Low_complexity 1 37 0 459 0 0 0 chr5 66425813 66425864 -133204286 + (CA)n Simple_repeat Simple_repeat 2 52 0 267 264 38 9 chr5 66426048 66426154 -133203996 + (TATATG)n Simple_repeat Simple_repeat 6 114 0 2353 186 77 82 chr5 66426580 66427408 -133202742 + L1MCa LINE L1 738 1561 -4865 2018 247 27 57 chr5 66427407 66427602 -133202548 + L1MCa LINE L1 1810 2009 -4417 * 479 147 9 18 chr5 66427602 66427711 -133202439 + L1MA4 LINE L1 6192 6299 -1 2018 247 27 57 chr5 66427711 66428595 -133201555 + L1MCa LINE L1 2009 2802 -3624 2091 107 10 10 chr5 66428595 66428895 -133201255 - AluSx SINE Alu -12 300 1 2018 247 27 57 chr5 66428895 66429059 -133201091 + L1MCa LINE L1 2802 2969 -3457 1422 243 37 57 chr5 66429075 66429492 -133200658 + L1ME1 LINE L1 2135 2508 -3707 2126 109 3 7 chr5 66429492 66429786 -133200364 - AluSx SINE Alu -19 293 1 1422 243 37 57 chr5 66429786 66430058 -133200092 + L1ME1 LINE L1 2508 2784 -3431 * 6978 106 14 23 chr5 66430040 66430475 -133199675 + L1MA2 LINE L1 4944 5382 -922 2436 66 0 7 chr5 66430475 66430779 -133199371 + AluY SINE Alu 1 302 -9 6978 106 14 23 chr5 66430779 66431718 -133198432 + L1MA2 LINE L1 5382 6304 0 619 219 108 27 chr5 66431733 66432081 -133198069 + L1ME1 LINE L1 2776 3243 -2972 1093 214 103 4 chr5 66432081 66432352 -133197798 + AluJb SINE Alu 1 298 -4 701 124 0 16 chr5 66432357 66432478 -133197672 + (GGAA)n Simple_repeat Simple_repeat 1 119 0 1135 222 80 56 chr5 66432478 66432521 -133197629 + L1ME1 LINE L1 3228 3268 -2947 2235 102 3 0 chr5 66432521 66432826 -133197324 - AluSp SINE Alu -7 306 1 1135 222 80 56 chr5 66432826 66433238 -133196912 + L1ME1 LINE L1 3268 3700 -2515 7251 153 14 26 chr5 66433238 66434387 -133195763 - L1PA13 LINE L1 0 6163 5028 2389 103 0 0 chr5 66434387 66434699 -133195451 - AluSx SINE Alu 0 312 1 7251 153 14 26 chr5 66434699 66435696 -133194454 - L1PA13 LINE L1 -1135 5028 4020 1135 222 80 56 chr5 66435696 66435774 -133194376 + L1ME1 LINE L1 3700 3775 -2440 7513 32 0 0 chr5 66435802 66436875 -133193275 - L1PA4 LINE L1 -3 6152 5081 978 226 88 13 chr5 66436886 66437191 -133192959 + L1ME1 LINE L1 4969 5296 -919 342 201 45 22 chr5 66437195 66437329 -133192821 + (TA)n Simple_repeat Simple_repeat 1 137 0 499 173 144 35 chr5 66437329 66437491 -133192659 + L1ME1 LINE L1 5305 5479 -743 1470 219 117 32 chr5 66437518 66437989 -133192161 + L1ME1 LINE L1 5719 6229 -6 1725 163 10 20 chr5 66438174 66438474 -133191676 - AluJo SINE Alu -15 297 1 338 244 129 50 chr5 66438593 66438794 -133191356 - L1MC5 LINE L1 -49 7912 7696 2173 185 57 2 chr5 66439623 66440028 -133190122 + MSTB1 LTR MaLR 1 427 -5 26 50 0 0 chr5 66442609 66442649 -133187501 + AT_rich Low_complexity Low_complexity 1 40 0 34 24 0 0 chr5 66443602 66443643 -133186507 + AT_rich Low_complexity Low_complexity 1 41 0 234 0 0 0 chr5 66444967 66444993 -133185157 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 252 0 0 0 chr5 66444992 66445020 -133185130 + (GA)n Simple_repeat Simple_repeat 2 29 0 210 348 22 0 chr5 66445330 66445419 -133184731 - MIR SINE MIR -111 151 61 189 240 21 104 chr5 66445446 66445542 -133184608 - L3 LINE CR1 -627 950 863 183 289 0 115 chr5 66445747 66445851 -133184299 - MIR SINE MIR -73 189 98 285 51 0 0 chr5 66446676 66446715 -133183435 + (A)n Simple_repeat Simple_repeat 1 39 0 339 255 43 0 chr5 66448192 66448286 -133181864 + Charlie2 DNA MER1_type 45 142 -2720 202 385 0 15 chr5 66448288 66448353 -133181797 - L2 LINE L2 -20 3252 3189 23 33 0 0 chr5 66450317 66450347 -133179803 + AT_rich Low_complexity Low_complexity 1 30 0 7346 211 39 30 chr5 66451219 66453721 -133176429 + L1M2c LINE L1 774 3251 -3537 3841 191 61 5 chr5 66453725 66454752 -133175398 + L1M2c LINE L1 3468 4552 -2236 1486 212 92 17 chr5 66454852 66455309 -133174841 + L1M2 LINE L1 2812 3311 -3537 12558 176 18 9 chr5 66455313 66456447 -133173703 + L1M2 LINE L1 3528 4650 -2198 2476 106 28 17 chr5 66456447 66456807 -133173343 - THE1B LTR MaLR 0 364 1 12558 176 18 9 chr5 66456807 66458227 -133171923 + L1M2 LINE L1 4650 6105 -743 473 287 82 10 chr5 66458661 66458933 -133171217 - L1MC4a LINE L1 -225 5896 5630 440 385 62 36 chr5 66458961 66459410 -133170740 + L2 LINE L2 2807 3267 -5 8488 155 39 47 chr5 66460321 66463052 -133167098 + L1MA7 LINE L1 3558 6286 -5 31 44 0 0 chr5 66463075 66463120 -133167030 + AT_rich Low_complexity Low_complexity 1 45 0 40 49 0 0 chr5 66463652 66463713 -133166437 + AT_rich Low_complexity Low_complexity 1 61 0 2203 102 10 0 chr5 66463835 66464129 -133166021 + AluSx SINE Alu 1 297 -15 973 212 120 11 chr5 66464447 66464721 -133165429 - L3b LINE CR1 -178 1405 1102 1860 134 22 0 chr5 66464934 66465210 -133164940 - AluSx SINE Alu -30 282 1 877 192 0 34 chr5 66465902 66466079 -133164071 + FAM SINE Alu 5 175 0 375 263 57 29 chr5 66466557 66466732 -133163418 + HAL1 LINE L1 2250 2429 -78 395 282 20 103 chr5 66467493 66467688 -133162462 - MIR SINE MIR -65 197 19 401 271 0 28 chr5 66467932 66468039 -133162111 - L2 LINE L2 0 3313 3210 246 188 0 78 chr5 66468583 66468647 -133161503 + MIR SINE MIR 107 165 -97 23 0 0 0 chr5 66471197 66471220 -133158930 + AT_rich Low_complexity Low_complexity 1 23 0 4463 201 46 45 chr5 66471380 66472679 -133157471 + L1MA8 LINE L1 2799 4098 -2048 4373 160 49 43 chr5 66472675 66474272 -133155878 + L1MA8 LINE L1 4536 6171 -120 * 2282 124 74 12 chr5 66474272 66474675 -133155475 - MSTA LTR MaLR 0 428 1 4373 160 49 43 chr5 66474675 66474775 -133155375 + L1MA8 LINE L1 6171 6269 -22 1990 160 0 3 chr5 66475960 66476273 -133153877 - AluJb SINE Alu 0 312 1 234 313 46 92 chr5 66476432 66476563 -133153587 + MIR3 SINE MIR 9 133 -75 21 0 0 0 chr5 66476766 66476787 -133153363 + AT_rich Low_complexity Low_complexity 1 21 0 2454 81 0 0 chr5 66478794 66479103 -133151047 - AluY SINE Alu -2 309 1 2271 113 0 3 chr5 66479601 66479901 -133150249 + AluSx SINE Alu 1 299 -13 1164 262 102 12 chr5 66481722 66482054 -133148096 + LTR16A LTR ERVL 88 449 -1 315 170 0 117 chr5 66482057 66482151 -133147999 + L1MC4 LINE L1 6621 6703 -1339 21 57 0 0 chr5 66482203 66482238 -133147912 + AT_rich Low_complexity Low_complexity 1 35 0 553 275 54 79 chr5 66482761 66483001 -133147149 + MLT1J LTR MaLR 198 431 -80 1933 138 7 3 chr5 66483010 66483300 -133146850 + AluSx SINE Alu 1 291 -21 900 175 45 23 chr5 66483303 66483480 -133146670 + AluJo/FRAM SINE Alu 129 309 -3 347 90 194 15 chr5 66483601 66483668 -133146482 + MER116 DNA Mariner 2 80 0 1081 89 0 0 chr5 66484365 66484500 -133145650 + AluSg SINE Alu 1 135 -175 41866 39 25 1 chr5 66484500 66490509 -133139641 + L1PA3 LINE L1 2 6154 -1 1288 132 0 0 chr5 66490523 66490713 -133139437 + AluSg SINE Alu 120 309 -3 1691 176 3 26 chr5 66490785 66491097 -133139053 + AluJb SINE Alu 1 305 -7 1771 218 57 14 chr5 66491973 66492413 -133137737 - MLT1C LTR MaLR -5 462 4 414 203 89 8 chr5 66493699 66493822 -133136328 + MER67C LTR ERV1 520 652 -58 31 0 0 0 chr5 66494055 66494086 -133136064 + AT_rich Low_complexity Low_complexity 1 31 0 705 274 79 0 chr5 66494198 66494388 -133135762 - MER63A DNA MER1_type -5 205 1 262 237 53 0 chr5 66494388 66494464 -133135686 - L1MC4a LINE L1 -1895 5913 5834 1875 161 0 13 chr5 66494516 66494814 -133135336 + AluSx SINE Alu 1 294 -18 22 0 0 0 chr5 66494865 66494887 -133135263 + AT_rich Low_complexity Low_complexity 1 22 0 220 184 0 0 chr5 66495387 66495425 -133134725 + CT-rich Low_complexity Low_complexity 1 38 0 2015 116 0 72 chr5 66495592 66495912 -133134238 - AluSx SINE Alu -15 297 1 315 271 0 0 chr5 66496760 66496830 -133133320 - MER45 DNA AcHobo -69 109 40 448 253 116 0 chr5 66496877 66497023 -133133127 + L2 LINE L2 2920 3082 -231 1859 221 20 0 chr5 66497039 66497387 -133132763 - MLT1A1 LTR MaLR 0 365 11 8042 201 78 17 chr5 66497398 66499029 -133131121 - MLT1A1-int LTR MaLR 0 1735 6 1736 191 30 35 chr5 66499034 66499401 -133130749 - MLT1A1 LTR MaLR 0 365 1 282 321 36 36 chr5 66499449 66499589 -133130561 + L2 LINE L2 3158 3297 -16 305 288 212 38 chr5 66499624 66499808 -133130342 + MIR SINE MIR 47 262 0 30 45 0 0 chr5 66499808 66499852 -133130298 + AT_rich Low_complexity Low_complexity 1 44 0 595 271 38 17 chr5 66500526 66500762 -133129388 - L1MC4a LINE L1 -348 5773 5533 1977 140 3 0 chr5 66500827 66501113 -133129037 - AluSx SINE Alu -25 287 1 2070 111 3 14 chr5 66502155 66502452 -133127698 + AluSx SINE Alu 1 294 -18 329 294 87 36 chr5 66502679 66502824 -133127326 + MIR SINE MIR 3 151 -63 2480 46 13 3 chr5 66503153 66503458 -133126692 + AluY SINE Alu 1 308 -3 23 0 0 0 chr5 66503659 66503682 -133126468 + AT_rich Low_complexity Low_complexity 1 23 0 1110 196 140 23 chr5 66505181 66505446 -133124704 - AluJo SINE Alu -6 296 1 1428 235 165 66 chr5 66505510 66505646 -133124504 - L1MC4 LINE L1 -11 8031 7910 306 0 0 0 chr5 66505646 66505680 -133124470 + (CA)n Simple_repeat Simple_repeat 2 35 0 1428 235 165 66 chr5 66505680 66505969 -133124181 - L1MC4 LINE L1 -132 7910 7651 2040 144 3 0 chr5 66505969 66506260 -133123890 - AluSx SINE Alu -16 296 5 1428 235 165 66 chr5 66506260 66506857 -133123293 - L1MC4 LINE L1 -391 7651 6907 23 0 0 0 chr5 66507099 66507122 -133123028 + AT_rich Low_complexity Low_complexity 1 23 0 705 245 223 44 chr5 66508250 66508752 -133121398 + MLT1G1 LTR MaLR 1 592 -3 222 314 113 16 chr5 66509128 66509252 -133120898 - MIR SINE MIR -50 212 77 11533 183 77 23 chr5 66510921 66511823 -133118327 - L1MCa LINE L1 -2346 4080 3229 1854 172 3 0 chr5 66511823 66512125 -133118025 + AluJo SINE Alu 1 303 -9 11533 183 77 23 chr5 66512125 66512670 -133117480 - L1MCa LINE L1 -3197 3229 2715 1947 109 52 4 chr5 66512670 66512937 -133117213 + AluSx SINE Alu 1 280 -32 1058 112 0 6 chr5 66512937 66513107 -133117043 + (GAAA)n Simple_repeat Simple_repeat 4 172 0 11533 183 77 23 chr5 66513107 66513203 -133116947 - L1MCa LINE L1 -3711 2715 2626 2132 108 7 0 chr5 66513203 66513491 -133116659 + AluSx SINE Alu 1 290 -22 11533 183 77 23 chr5 66513491 66514448 -133115702 - L1MCa LINE L1 -3800 2626 1723 1422 193 7 51 chr5 66514448 66514743 -133115407 - AluJo SINE Alu -30 282 1 11533 183 77 23 chr5 66514743 66516097 -133114053 - L1MCa LINE L1 -4703 1723 12 4607 286 113 12 chr5 66516119 66517893 -133112257 + L2 LINE L2 609 2562 -752 294 298 57 35 chr5 66518019 66518160 -133111990 + L2 LINE L2 3118 3261 -52 14872 46 1 1 chr5 66518379 66520985 -133109165 - L1PA5 LINE L1 -6 6148 3542 1068 70 0 7 chr5 66520985 66521120 -133109030 - L1P LINE L1 -2110 4036 3901 * 19581 51 0 11 chr5 66521118 66521567 -133108583 + L1P LINE L1 1393 1845 -4301 3505 74 25 4 chr5 66521567 66522054 -133108096 - L1PA4 LINE L1 -2 6153 5657 19581 51 0 11 chr5 66522054 66524152 -133105998 + L1P LINE L1 1845 3914 -2232 3567 149 59 44 chr5 66524617 66525090 -133105060 - L1MA8 LINE L1 0 6291 5802 1805 148 4 4 chr5 66525090 66525367 -133104783 - AluJo SINE Alu -35 277 1 3567 149 59 44 chr5 66525367 66525617 -133104533 - L1MA8 LINE L1 -489 5802 5557 21 0 0 0 chr5 66525973 66525994 -133104156 + AT_rich Low_complexity Low_complexity 1 21 0 647 214 75 21 chr5 66526193 66526380 -133103770 - MIR SINE MIR 0 262 66 351 169 0 0 chr5 66526615 66526686 -133103464 + (CA)n Simple_repeat Simple_repeat 2 72 0 31 44 0 0 chr5 66527935 66527980 -133102170 + AT_rich Low_complexity Low_complexity 1 45 0 1093 235 57 86 chr5 66528137 66528695 -133101455 + MER34 LTR ERV1 1 542 0 1922 174 9 10 chr5 66529035 66529568 -133100582 + L1M4 LINE L1 4960 5493 -691 1668 179 13 0 chr5 66530513 66530820 -133099330 + L1M4 LINE L1 5478 5788 -396 967 126 11 63 chr5 66530821 66530995 -133099155 + AluSg/x SINE Alu 128 292 -20 243 61 0 0 chr5 66531010 66531043 -133099107 + (TAAAA)n Simple_repeat Simple_repeat 4 36 0 7589 194 17 9 chr5 66531050 66532667 -133097483 + L1MB7 LINE L1 3574 5203 -943 21 36 0 0 chr5 66532823 66532851 -133097299 + AT_rich Low_complexity Low_complexity 1 28 0 5702 130 11 3 chr5 66532854 66533798 -133096352 + L1PA16 LINE L1 5211 6160 -6 2248 149 17 24 chr5 66533834 66534176 -133095974 + L1MB7 LINE L1 5759 6099 -85 2317 111 13 34 chr5 66534176 66534556 -133095594 - THE1C LTR MaLR -3 372 1 2248 149 17 24 chr5 66534556 66534622 -133095528 + L1MB7 LINE L1 6099 6164 -20 2125 110 7 0 chr5 66534622 66534913 -133095237 - AluSp SINE Alu -20 293 1 2734 173 110 8 chr5 66535158 66535766 -133094384 - L1PBa LINE L1 -3858 3004 2334 5621 129 25 45 chr5 66535783 66536584 -133093566 + L1PB3 LINE L1 4702 5464 -690 2171 96 26 7 chr5 66536584 66536886 -133093264 + AluSc SINE Alu 2 309 0 5621 129 25 45 chr5 66536886 66537560 -133092590 + L1PB3 LINE L1 5464 6151 -3 21 0 0 0 chr5 66537562 66537583 -133092567 + AT_rich Low_complexity Low_complexity 1 21 0 2016 105 0 91 chr5 66539219 66539561 -133090589 - AluSp SINE Alu -2 311 1 2304 39 43 0 chr5 66539998 66540278 -133089872 - AluY SINE Alu -13 298 7 2125 101 0 42 chr5 66540284 66540591 -133089559 - AluSq SINE Alu -17 296 3 254 123 35 53 chr5 66540623 66540680 -133089470 + U2 snRNA snRNA 1 56 -132 212 202 10 81 chr5 66540706 66540805 -133089345 + A-rich Low_complexity Low_complexity 2 93 0 545 275 51 42 chr5 66540814 66541145 -133089005 + L1MEd LINE L1 924 1257 -4862 293 298 58 21 chr5 66541182 66541373 -133088777 + L1MEd LINE L1 2114 2311 -3818 21 57 0 0 chr5 66541446 66541481 -133088669 + AT_rich Low_complexity Low_complexity 1 35 0 813 192 0 0 chr5 66541529 66541680 -133088470 - FRAM SINE Alu -3 173 23 2165 76 0 0 chr5 66541775 66542051 -133088099 + AluY SINE Alu 25 300 -11 21 0 0 0 chr5 66542078 66542099 -133088051 + AT_rich Low_complexity Low_complexity 1 21 0 2151 130 10 0 chr5 66542181 66542482 -133087668 + AluSx SINE Alu 1 304 -8 470 252 8 8 chr5 66543176 66543295 -133086855 + MER34 LTR ERV1 1 119 -423 * 1606 182 56 76 chr5 66543280 66543656 -133086494 + MER39 LTR ERV1 216 581 -126 654 86 0 0 chr5 66543656 66543749 -133086401 + L1MA2 LINE L1 6212 6304 0 1606 182 56 76 chr5 66543749 66543872 -133086278 + MER39 LTR ERV1 581 705 -2 21 71 0 0 chr5 66544370 66544412 -133085738 + AT_rich Low_complexity Low_complexity 1 42 0 343 325 159 31 chr5 66544517 66544908 -133085242 + HAL1 LINE L1 407 847 -1660 329 319 155 58 chr5 66544981 66545323 -133084827 + L2 LINE L2 2898 3272 0 21 0 0 0 chr5 66545378 66545399 -133084751 + AT_rich Low_complexity Low_complexity 1 21 0 778 230 69 84 chr5 66545956 66546217 -133083933 - L2 LINE L2 -905 2409 2153 278 278 96 35 chr5 66546775 66546890 -133083260 + L2 LINE L2 2665 2786 -528 183 324 157 0 chr5 66546984 66547086 -133083064 + L2 LINE L2 2807 2924 -389 185 397 46 34 chr5 66547186 66547448 -133082702 + L2 LINE L2 2828 3092 -180 3727 184 29 21 chr5 66547831 66548604 -133081546 + L1MB8 LINE L1 5340 6118 -60 305 130 11 109 chr5 66548620 66548712 -133081438 + L1MB8 LINE L1 6091 6173 -5 458 241 124 68 chr5 66548991 66549256 -133080894 + L1ME LINE L1 5509 5788 -378 22 35 0 0 chr5 66549591 66549620 -133080530 + AT_rich Low_complexity Low_complexity 1 29 0 471 256 70 0 chr5 66549702 66549858 -133080292 + L1MD3 LINE L1 7811 7977 -18 2153 102 10 10 chr5 66549868 66550161 -133079989 - AluSx SINE Alu -19 293 1 32 43 0 0 chr5 66550161 66550207 -133079943 + AT_rich Low_complexity Low_complexity 1 46 0 536 192 40 0 chr5 66550317 66550416 -133079734 + FLAM_C SINE Alu 1 103 -40 183 129 0 0 chr5 66550455 66550486 -133079664 + (CA)n Simple_repeat Simple_repeat 2 32 0 401 174 0 0 chr5 66550491 66550560 -133079590 + AluJ/FRAM SINE Alu 228 296 -6 358 341 72 65 chr5 66550663 66550789 -133079361 - L3b LINE CR1 -8 1575 1451 1950 110 3 72 chr5 66550789 66551108 -133079042 + AluSx SINE Alu 1 297 -15 358 341 72 65 chr5 66551108 66551146 -133079004 - L3b LINE CR1 -132 1451 1415 2267 115 27 56 chr5 66551146 66551334 -133078816 - THE1B LTR MaLR 0 364 191 2338 92 0 0 chr5 66551334 66551629 -133078521 - AluY SINE Alu -16 295 1 2267 115 27 56 chr5 66551629 66551815 -133078335 - THE1B LTR MaLR -173 191 1 910 232 128 53 chr5 66551823 66552142 -133078008 + MER2 DNA MER2_type 2 344 0 358 341 72 65 chr5 66552142 66552413 -133077737 - L3b LINE CR1 -174 1409 1127 2037 103 7 3 chr5 66552481 66552763 -133077387 + AluSx SINE Alu 1 283 -29 2089 243 61 49 chr5 66553231 66554044 -133076106 + L1MC4 LINE L1 239 1040 -6936 1877 147 7 13 chr5 66554044 66554343 -133075807 - AluSx SINE Alu -15 297 1 2089 243 61 49 chr5 66554343 66554422 -133075728 + L1MC4 LINE L1 1040 7819 -157 3441 259 87 19 chr5 66554454 66555757 -133074393 + L1MEc LINE L1 36 1426 -4970 3134 250 56 54 chr5 66555762 66556914 -133073236 + L1MEc LINE L1 2660 3807 -2408 3966 70 8 0 chr5 66556914 66557432 -133072718 - L1PA10 LINE L1 -9 6159 5638 3134 250 56 54 chr5 66557432 66557572 -133072578 + L1MEc LINE L1 3807 3945 -2270 2062 137 0 13 chr5 66557572 66557885 -133072265 + AluJb SINE Alu 1 309 -3 3134 250 56 54 chr5 66557885 66558225 -133071925 + L1MEc LINE L1 3945 4283 -1932 186 43 0 0 chr5 66558225 66558248 -133071902 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3134 250 56 54 chr5 66558248 66558347 -133071803 + L1MEc LINE L1 4283 4380 -1835 1677 116 104 0 chr5 66558347 66558598 -133071552 + AluSq SINE Alu 3 279 -34 3134 250 56 54 chr5 66558598 66558885 -133071265 + L1MEc LINE L1 4380 4625 -1590 430 216 0 23 chr5 66558896 66558984 -133071166 - MLT1E LTR MaLR -507 86 1 633 274 61 10 chr5 66559050 66559247 -133070903 + MIR SINE MIR 28 234 -28 2033 136 0 13 chr5 66559563 66559871 -133070279 - AluSx SINE Alu -2 310 7 246 163 0 20 chr5 66559873 66559922 -133070228 - MER94 DNA DNA -73 61 14 243 109 0 43 chr5 66560065 66560111 -133070039 + AluSq SINE Alu 257 300 -2 296 270 10 20 chr5 66560111 66560211 -133069939 + L1M4 LINE L1 3823 3921 -2225 1936 136 24 35 chr5 66560847 66561221 -133068929 + L1MB8 LINE L1 5804 6173 -5 23 0 0 0 chr5 66561511 66561534 -133068616 + AT_rich Low_complexity Low_complexity 1 23 0 483 165 61 26 chr5 66561600 66561715 -133068435 + L1MA8 LINE L1 6166 6284 -7 23 54 0 0 chr5 66562060 66562097 -133068053 + AT_rich Low_complexity Low_complexity 1 37 0 253 184 68 10 chr5 66562289 66562392 -133067758 + (TA)n Simple_repeat Simple_repeat 2 110 0 2169 66 35 7 chr5 66562700 66562988 -133067162 - AluY SINE Alu -15 296 1 2241 86 0 22 chr5 66563570 66563885 -133066265 + AluSg SINE Alu 1 308 -2 332 301 154 6 chr5 66564946 66565102 -133065048 + MIR SINE MIR 42 220 -42 21 36 0 0 chr5 66566277 66566305 -133063845 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 66567189 66567211 -133062939 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 66567389 66567412 -133062738 + AT_rich Low_complexity Low_complexity 1 23 0 1526 209 52 28 chr5 66568149 66568536 -133061614 + MSTD LTR MaLR 1 396 0 1621 232 171 31 chr5 66568720 66569233 -133060917 + MLT1E LTR MaLR 3 587 -6 2141 127 7 7 chr5 66569497 66569804 -133060346 + AluSq SINE Alu 1 307 -6 1306 122 10 29 chr5 66569864 66570069 -133060081 + AluSq SINE Alu 112 312 -1 29 47 0 0 chr5 66570236 66570279 -133059871 + AT_rich Low_complexity Low_complexity 1 43 0 897 167 31 70 chr5 66570698 66570926 -133059224 + L2 LINE L2 3095 3313 0 380 175 39 10 chr5 66570987 66571090 -133059060 + L1ME4a LINE L1 6004 6109 -12 2115 87 70 0 chr5 66571974 66572261 -133057889 - AluSc SINE Alu -2 307 1 384 280 67 67 chr5 66572627 66572648 -133057502 - L3 LINE CR1 -144 1433 1413 2269 107 0 0 chr5 66572648 66572946 -133057204 - AluSg SINE Alu -12 298 1 384 280 67 67 chr5 66572946 66573117 -133057033 - L3 LINE CR1 -163 1414 1241 877 89 0 15 chr5 66573279 66573414 -133056736 - FLAM_C SINE Alu 0 133 1 639 320 51 20 chr5 66573427 66573680 -133056470 + L2 LINE L2 2599 2859 -455 307 300 35 125 chr5 66573674 66573961 -133056189 + L2 LINE L2 2817 3077 -195 * 282 287 58 0 chr5 66574763 66574850 -133055300 - MIR SINE MIR -11 251 160 521 288 172 19 chr5 66574908 66575228 -133054922 + MLT1J2 LTR MaLR 82 450 0 283 255 157 20 chr5 66575240 66575342 -133054808 - MIR SINE MIR -61 147 32 218 200 40 20 chr5 66575823 66575873 -133054277 + MIR3 SINE MIR 110 160 -48 274 260 0 125 chr5 66576041 66576137 -133054013 + L3 LINE CR1 1491 1574 -3 204 314 127 0 chr5 66576690 66576808 -133053342 - MIR SINE MIR -30 232 100 1099 294 52 60 chr5 66576891 66577041 -133053109 - L2 LINE L2 0 3313 3163 2233 100 3 0 chr5 66577041 66577330 -133052820 + AluSg SINE Alu 6 295 -15 1099 294 52 60 chr5 66577330 66577693 -133052457 - L2 LINE L2 -150 3163 2804 2064 283 62 14 chr5 66577747 66578397 -133051753 + L2 LINE L2 38 718 -2596 1627 183 89 18 chr5 66578416 66578865 -133051285 - Charlie4a DNA MER1_type -22 486 6 4378 246 158 21 chr5 66578870 66580430 -133049720 + L2 LINE L2 697 2470 -844 775 283 274 3 chr5 66580436 66580849 -133049301 + L2 LINE L2 2790 3313 0 358 257 132 40 chr5 66580944 66580997 -133049153 + HAL1 LINE L1 972 1019 -1488 2488 31 7 0 chr5 66580997 66581289 -133048861 + AluY SINE Alu 1 294 -17 358 257 132 40 chr5 66581289 66581682 -133048468 + HAL1 LINE L1 1019 1459 -1048 22 56 0 0 chr5 66581682 66581718 -133048432 + AT_rich Low_complexity Low_complexity 1 36 0 262 185 0 31 chr5 66581854 66581919 -133048231 + L1P LINE L1 1825 1887 -4259 652 88 22 0 chr5 66582598 66582689 -133047461 + AluSg/x SINE Alu 206 298 -11 400 176 19 46 chr5 66582747 66582855 -133047295 + L1MC4 LINE L1 7277 7381 -661 194 362 68 36 chr5 66583048 66583327 -133046823 + L2 LINE L2 2214 2501 -813 21 0 0 0 chr5 66583333 66583354 -133046796 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 66583741 66583765 -133046385 + AT_rich Low_complexity Low_complexity 1 24 0 676 195 0 8 chr5 66584334 66584457 -133045693 - FLAM_C SINE Alu -21 122 1 27 0 0 0 chr5 66584912 66584939 -133045211 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chr5 66585655 66585690 -133044460 + AT_rich Low_complexity Low_complexity 1 35 0 1572 97 0 9 chr5 66585803 66586020 -133044130 + AluSg/x SINE Alu 95 309 -1 2458 144 29 120 chr5 66586034 66586618 -133043532 + L1MB8 LINE L1 5542 6053 -125 192 77 0 0 chr5 66586618 66586644 -133043506 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 2458 144 29 120 chr5 66586644 66586759 -133043391 + L1MB8 LINE L1 6053 6177 -1 195 100 0 0 chr5 66589030 66589060 -133041090 + (A)n Simple_repeat Simple_repeat 1 30 0 214 347 61 74 chr5 66589659 66589956 -133040194 - L2 LINE L2 -64 3208 2916 1557 249 143 13 chr5 66590137 66590662 -133039488 + MLT1E LTR MaLR 1 593 0 2160 90 0 23 chr5 66590848 66591148 -133039002 - AluSg SINE Alu -17 293 1 2179 130 3 0 chr5 66592081 66592388 -133037762 + AluSx SINE Alu 1 308 -4 286 217 94 38 chr5 66592677 66592783 -133037367 + MIR SINE MIR 98 209 -53 32 0 0 0 chr5 66595666 66595698 -133034452 + AT_rich Low_complexity Low_complexity 1 32 0 234 279 16 0 chr5 66596756 66596817 -133033333 + GA-rich Low_complexity Low_complexity 3 64 0 255 217 0 0 chr5 66597808 66597868 -133032282 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 386 224 26 35 chr5 66598354 66598470 -133031680 - L1MC5 LINE L1 -50 7911 7797 325 236 210 6 chr5 66598492 66598649 -133031501 - L1MC5 LINE L1 -238 7723 7535 246 202 48 115 chr5 66598669 66598773 -133031377 - L1ME3A LINE L1 -5 6165 6069 27 81 0 0 chr5 66598789 66598851 -133031299 + AT_rich Low_complexity Low_complexity 1 62 0 630 149 53 0 chr5 66598851 66598965 -133031185 - AluJo SINE Alu -140 172 53 3715 106 217 123 chr5 66598966 66600236 -133029914 - pTR5 LTR ERV1 0 2438 743 265 211 18 0 chr5 66600236 66600293 -133029857 - AluS SINE Alu -244 58 1 2373 64 0 0 chr5 66600364 66600647 -133029503 - AluY SINE Alu -10 301 19 180 0 0 0 chr5 66600896 66600916 -133029234 + (A)n Simple_repeat Simple_repeat 1 20 0 2116 140 42 35 chr5 66601048 66601594 -133028556 - MLT2A2 LTR ERVL 0 554 3 26746 78 27 24 chr5 66601596 66605455 -133024695 - HERVL-A2 LTR ERVL 0 5654 1784 1305 180 16 100 chr5 66606001 66606312 -133023838 + AluJo SINE Alu 11 295 -17 2125 104 45 0 chr5 66606335 66606622 -133023528 - AluSx SINE Alu -12 300 1 535 300 136 4 chr5 66606720 66607000 -133023150 + L1M4 LINE L1 5087 5403 -743 1639 83 0 38 chr5 66607038 66607304 -133022846 + L1MA3 LINE L1 5790 6045 -260 759 126 67 0 chr5 66607320 66607439 -133022711 + FLAM_C SINE Alu 1 127 -16 35 0 0 22 chr5 66607439 66607458 -133022692 + AT_rich Low_complexity Low_complexity 1 19 -26 1348 134 0 53 chr5 66607458 66607720 -133022430 + L1MA2 LINE L1 6057 6304 0 35 0 0 22 chr5 66607720 66607746 -133022404 + AT_rich Low_complexity Low_complexity 19 45 0 392 352 26 34 chr5 66607874 66608138 -133022012 + HAL1b LINE L1 91 352 -996 2147 129 3 7 chr5 66608517 66608815 -133021335 + AluSx SINE Alu 1 298 -10 246 32 0 0 chr5 66608815 66608846 -133021304 + (CA)n Simple_repeat Simple_repeat 2 32 0 437 281 128 36 chr5 66608886 66609135 -133021015 + L1M4 LINE L1 2266 2537 -3609 961 183 0 6 chr5 66609233 66609397 -133020753 + FAM SINE Alu 1 163 -12 592 169 76 0 chr5 66609656 66609774 -133020376 + MER3 DNA MER1_type 2 128 -81 465 119 22 189 chr5 66609762 66609947 -133020203 + MER3 DNA MER1_type 2432 2585 0 * 1026 241 168 20 chr5 66609963 66610216 -133019934 + L1ME4a LINE L1 5329 5543 -578 1832 161 14 4 chr5 66610216 66610520 -133019630 + AluJb SINE Alu 1 307 0 1026 241 168 20 chr5 66610520 66610812 -133019338 + L1ME4a LINE L1 5543 5956 -165 354 205 120 0 chr5 66610896 66611013 -133019137 + L1ME4a LINE L1 5991 6121 0 2197 93 0 23 chr5 66611013 66611323 -133018827 + AluSg1 SINE Alu 1 303 -6 2268 113 0 3 chr5 66611327 66611628 -133018522 + AluSx SINE Alu 1 300 -12 556 260 64 56 chr5 66611681 66611931 -133018219 - MLT1E LTR MaLR -337 256 5 805 203 0 0 chr5 66611973 66612111 -133018039 + FRAM SINE Alu 9 146 -30 201 74 0 0 chr5 66612111 66612138 -133018012 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 367 250 28 21 chr5 66612162 66612306 -133017844 + L1MEc LINE L1 1863 2007 -4389 214 177 48 0 chr5 66612448 66612510 -133017640 + (TA)n Simple_repeat Simple_repeat 2 66 0 2817 146 72 101 chr5 66612543 66612869 -133017281 - L1MDa LINE L1 -4157 2383 2049 1366 160 88 72 chr5 66612869 66613176 -133016974 - AluJo SINE Alu 0 312 1 2817 146 72 101 chr5 66613176 66613269 -133016881 - L1MDa LINE L1 -4491 2049 1955 532 168 0 134 chr5 66613269 66613418 -133016732 - FLAM_C SINE Alu -4 129 1 2817 146 72 101 chr5 66613418 66613901 -133016249 - L1MDa LINE L1 -4585 1955 1506 7611 8 0 0 chr5 66613910 66614809 -133015341 - L1HS LINE L1 0 6155 5257 817 170 24 67 chr5 66614806 66614893 -133015257 - L1MDa LINE L1 -5034 1506 1417 * 2079 112 0 44 chr5 66614893 66615214 -133014936 - AluSc SINE Alu -2 307 1 817 170 24 67 chr5 66615214 66615413 -133014737 - L1MDa LINE L1 -5123 1417 1232 2143 134 3 0 chr5 66615416 66615723 -133014427 - AluSx SINE Alu -4 308 1 2943 265 120 14 chr5 66615723 66616762 -133013388 - L1MDa LINE L1 -5388 1152 4 584 159 145 69 chr5 66616863 66617008 -133013142 - FRAM SINE Alu -9 157 2 2078 108 32 0 chr5 66617044 66617346 -133012804 - AluSx SINE Alu 0 311 1 2114 104 24 7 chr5 66617358 66617655 -133012495 - AluSx SINE Alu -10 302 1 275 247 41 47 chr5 66617660 66617830 -133012320 - L1M4 LINE L1 -825 5321 5153 24 0 0 0 chr5 66617840 66617864 -133012286 + AT_rich Low_complexity Low_complexity 1 24 0 2333 81 0 7 chr5 66617911 66618206 -133011944 - AluSg1 SINE Alu -16 293 1 22 0 0 0 chr5 66618209 66618231 -133011919 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 66618400 66618422 -133011728 + AT_rich Low_complexity Low_complexity 1 22 0 2101 125 3 7 chr5 66618425 66618729 -133011421 + AluSq SINE Alu 1 303 -10 180 0 0 0 chr5 66619184 66619204 -133010946 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 750 202 47 67 chr5 66619209 66619402 -133010748 - AluJo SINE Alu -37 275 87 1832 177 0 26 chr5 66619603 66619913 -133010237 + AluJb SINE Alu 2 303 -9 296 282 102 53 chr5 66619951 66620196 -133009954 - L1MEd LINE L1 -4862 1257 1001 1306 179 130 0 chr5 66620355 66620617 -133009533 + AluJo SINE Alu 3 298 -14 915 131 0 0 chr5 66620618 66620755 -133009395 + AluJb SINE Alu 1 137 -175 2077 134 0 3 chr5 66620757 66621049 -133009101 + AluSx SINE Alu 5 295 -17 666 337 54 9 chr5 66621186 66621536 -133008614 - MLT1L LTR MaLR -6 609 244 2535 222 52 31 chr5 66621905 66622676 -133007474 - L1MC4a LINE L1 -86 7722 6936 1029 212 66 24 chr5 66622715 66622762 -133007388 + L1M4 LINE L1 4985 5029 -1117 2240 105 0 10 chr5 66622762 66623066 -133007084 + AluSx SINE Alu 1 301 -11 1029 212 66 24 chr5 66623066 66623353 -133006797 + L1M4 LINE L1 5029 5333 -813 1870 179 21 10 chr5 66623551 66623936 -133006214 - L1MC2 LINE L1 -340 6284 5896 11167 153 64 35 chr5 66623938 66624617 -133005533 + Tigger1 DNA MER2_type 2 660 -1758 2255 137 42 33 chr5 66624617 66624754 -133005396 + MSTC LTR MaLR 1 135 -293 2377 94 0 3 chr5 66624754 66625063 -133005087 + AluSq SINE Alu 3 310 -3 2255 137 42 33 chr5 66625063 66625349 -133004801 + MSTC LTR MaLR 135 428 0 11167 153 64 35 chr5 66625349 66627018 -133003132 + Tigger1 DNA MER2_type 660 2418 0 1312 183 56 12 chr5 66627021 66627509 -133002641 - L1MC2 LINE L1 -731 5893 5347 * 3930 221 126 60 chr5 66627497 66628507 -133001643 - L1MC2 LINE L1 -1413 5013 4071 2342 82 0 22 chr5 66628507 66628824 -133001326 - AluSg SINE Alu 0 310 1 3930 221 126 60 chr5 66628824 66629465 -133000685 - L1MC2 LINE L1 -2355 4071 3224 2317 70 7 10 chr5 66629465 66629764 -133000386 - AluY SINE Alu -13 298 1 3930 221 126 60 chr5 66629764 66629965 -133000185 - L1MC2 LINE L1 -3202 3224 3038 505 212 170 32 chr5 66629979 66630088 -133000062 - L1MC2 LINE L1 -3730 2696 2603 1297 216 76 36 chr5 66630088 66630444 -132999706 - MLT1A2 LTR MaLR -4 370 1 505 212 170 32 chr5 66630444 66630682 -132999468 - L1MC2 LINE L1 -3823 2603 2264 2261 101 7 3 chr5 66631207 66631504 -132998646 - AluSx SINE Alu -14 298 1 21 36 0 0 chr5 66632401 66632429 -132997721 + AT_rich Low_complexity Low_complexity 1 28 0 230 387 47 0 chr5 66633722 66633828 -132996322 - MIR SINE MIR -68 140 30 2482 151 34 5 chr5 66634276 66634692 -132995458 + MSTA LTR MaLR 1 428 0 21 36 0 0 chr5 66635592 66635620 -132994530 + AT_rich Low_complexity Low_complexity 1 28 0 2127 112 0 3 chr5 66635869 66636163 -132993987 - AluSq SINE Alu -20 293 1 1194 329 79 55 chr5 66636546 66636687 -132993463 - L3 LINE CR1 -254 1323 1187 1752 147 30 33 chr5 66636687 66636987 -132993163 - AluJo SINE Alu -9 303 5 1194 329 79 55 chr5 66636987 66637723 -132992427 - L3 LINE CR1 -390 1187 425 1399 246 146 56 chr5 66637942 66638357 -132991793 + HAL1b LINE L1 208 584 -764 2126 94 0 32 chr5 66638357 66638666 -132991484 + AluY SINE Alu 3 301 -10 1514 110 10 110 chr5 66638666 66638955 -132991195 + AluSq SINE Alu 36 296 -17 1399 246 146 56 chr5 66638955 66639338 -132990812 + HAL1b LINE L1 584 931 -417 1938 147 3 26 chr5 66639338 66639645 -132990505 + AluSx SINE Alu 1 300 -12 1399 246 146 56 chr5 66639645 66639843 -132990307 + HAL1b LINE L1 931 1296 -52 1224 186 106 75 chr5 66639867 66640243 -132989907 + MLT1B LTR MaLR 1 388 -2 710 182 8 0 chr5 66640940 66641061 -132989089 + FLAM_A SINE Alu 1 122 -11 2049 130 6 19 chr5 66641072 66641387 -132988763 + AluSx SINE Alu 1 311 -1 504 0 0 0 chr5 66641760 66641816 -132988334 + (TA)n Simple_repeat Simple_repeat 2 57 0 1768 136 0 44 chr5 66642207 66642502 -132987648 + AluSx SINE Alu 1 282 -30 2378 73 10 0 chr5 66643744 66644047 -132986103 - AluY SINE Alu -5 306 1 2466 84 0 0 chr5 66644055 66644364 -132985786 - AluSg SINE Alu -1 309 1 606 319 48 28 chr5 66644547 66644798 -132985352 - L2 LINE L2 -171 3142 2887 296 192 64 0 chr5 66644880 66644958 -132985192 + L1MEc LINE L1 2029 2111 -4285 1369 144 0 5 chr5 66644968 66645199 -132984951 + AluJb SINE Alu 81 310 0 672 229 14 7 chr5 66645272 66645412 -132984738 + FRAM SINE Alu 1 141 -35 4450 243 71 100 chr5 66645480 66645770 -132984380 + L1M4 LINE L1 2773 3070 -3076 2477 68 0 0 chr5 66645770 66646063 -132984087 - AluSc SINE Alu -16 293 1 4450 243 71 100 chr5 66646063 66646897 -132983253 + L1M4 LINE L1 3070 3927 -2219 2341 90 3 0 chr5 66646897 66647198 -132982952 + AluSp SINE Alu 9 310 -3 4450 243 71 100 chr5 66647198 66647339 -132982811 + L1M4 LINE L1 3927 4071 -2075 1860 121 40 4 chr5 66647339 66647648 -132982502 + AluSx SINE Alu 1 319 0 4450 243 71 100 chr5 66647648 66648022 -132982128 + L1M4 LINE L1 4071 4455 -1691 2001 92 0 49 chr5 66648022 66648348 -132981802 + AluYa5 SINE Alu 1 310 -1 4450 243 71 100 chr5 66648348 66649208 -132980942 + L1M4 LINE L1 4455 5202 -944 1407 180 7 54 chr5 66649208 66649502 -132980648 + AluJb SINE Alu 1 280 -32 1569 241 129 43 chr5 66649542 66650099 -132980051 + MER77 LTR ERV1 1 605 0 931 281 57 52 chr5 66650159 66650525 -132979625 + MER77-int LTR ERV1 57 424 -3767 1554 176 17 47 chr5 66650604 66650905 -132979245 + AluJo SINE Alu 1 292 -20 697 274 103 32 chr5 66651122 66651374 -132978776 + MSTD LTR MaLR 38 307 -89 311 270 14 0 chr5 66651466 66651540 -132978610 - MER77 LTR ERV1 -167 438 364 2179 77 18 3 chr5 66651586 66651872 -132978278 - AluY SINE Alu -21 290 1 323 164 0 0 chr5 66651892 66651947 -132978203 + MSTD LTR MaLR 342 396 0 1902 205 40 11 chr5 66651950 66652394 -132977756 - L1MB8 LINE L1 -278 5900 5444 268 283 81 25 chr5 66652414 66652612 -132977538 - HAL1 LINE L1 -1487 1020 812 725 221 39 0 chr5 66652744 66652898 -132977252 - MLT-int LTR MaLR -1196 539 380 385 363 94 27 chr5 66652919 66653250 -132976900 - HAL1 LINE L1 -1897 610 258 4611 232 158 30 chr5 66653455 66654666 -132975484 - MLT1A1-int LTR MaLR -14 1721 273 3358 196 79 52 chr5 66654666 66655081 -132975069 + MER21B LTR ERV1 1 404 -459 1843 143 6 54 chr5 66655081 66655395 -132974755 - AluJb SINE Alu -13 299 1 3358 196 79 52 chr5 66655395 66655819 -132974331 + MER21B LTR ERV1 404 862 -1 4611 232 158 30 chr5 66655819 66656131 -132974019 - MLT1A1-int LTR MaLR -1462 273 2 1617 173 107 21 chr5 66656133 66656469 -132973681 - MLT1A1 LTR MaLR 0 365 1 2199 119 0 0 chr5 66656629 66656922 -132973228 + AluSg SINE Alu 1 293 -17 1617 148 4 0 chr5 66657255 66657491 -132972659 - AluSq SINE Alu -31 282 46 429 307 17 45 chr5 66657852 66658128 -132972022 - L1MC4a LINE L1 -297 5824 5564 607 264 150 32 chr5 66658409 66658629 -132971521 - MLT1A1 LTR MaLR -119 246 1 3753 134 44 10 chr5 66658629 66659314 -132970836 + L1MB2 LINE L1 5463 6170 -1 2237 189 88 21 chr5 66659322 66659597 -132970553 + L1MDa LINE L1 1471 1726 -4814 513 0 0 0 chr5 66659597 66659654 -132970496 + (CA)n Simple_repeat Simple_repeat 1 57 0 2237 189 88 21 chr5 66659654 66659959 -132970191 + L1MDa LINE L1 1726 2090 -4450 820 224 113 29 chr5 66659963 66660209 -132969941 + MLT1E LTR MaLR 320 582 -44 487 101 0 0 chr5 66660509 66660578 -132969572 - AluSq SINE Alu -244 69 1 220 344 61 56 chr5 66660671 66660809 -132969341 - L2 LINE L2 -938 2376 2235 2256 143 34 8 chr5 66660809 66661187 -132968963 + MLT1B LTR MaLR 1 388 -2 220 344 61 56 chr5 66661187 66661228 -132968922 - L2 LINE L2 -1079 2235 2196 2157 121 7 0 chr5 66661383 66661681 -132968469 + AluSx SINE Alu 1 300 -12 262 193 133 12 chr5 66661751 66661834 -132968316 + L1ME LINE L1 5422 5514 -656 184 321 109 49 chr5 66661845 66661940 -132968210 - L2 LINE L2 -1085 2229 2141 2279 101 0 0 chr5 66661940 66662236 -132967914 - AluY SINE Alu -15 296 1 184 321 109 49 chr5 66662236 66662324 -132967826 - L2 LINE L2 -1173 2141 2035 14101 130 55 9 chr5 66662402 66664187 -132965963 - Tigger1 DNA MER2_type 0 2418 500 1802 130 3 35 chr5 66664187 66664472 -132965678 + AluSc SINE Alu 29 304 -5 14101 130 55 9 chr5 66664472 66664997 -132965153 - Tigger1 DNA MER2_type -1918 500 1 2005 122 0 27 chr5 66665249 66665545 -132964605 + AluJb SINE Alu 18 305 -7 1255 174 9 5 chr5 66666233 66666452 -132963698 - AluSg/x SINE Alu -11 299 80 1115 91 203 0 chr5 66667536 66667723 -132962427 + MER30 DNA MER1_type 6 230 0 476 361 138 35 chr5 66667805 66668413 -132961737 + L2 LINE L2 2329 3036 -236 2085 78 3 48 chr5 66668413 66668708 -132961442 - AluSc SINE Alu -15 294 13 476 361 138 35 chr5 66668708 66668872 -132961278 + L2 LINE L2 3036 3182 -90 1918 283 100 24 chr5 66669231 66670238 -132959912 - L2 LINE L2 0 3313 2215 511 211 105 0 chr5 66670243 66670338 -132959812 + Tigger3(Golem) DNA MER2_type 4 108 -2921 3014 126 197 13 chr5 66670338 66670461 -132959689 + Tigger3(Golem) DNA MER2_type 2285 2384 -645 1680 183 3 16 chr5 66670461 66670773 -132959377 + AluJo SINE Alu 2 309 -3 3014 126 197 13 chr5 66670773 66671278 -132958872 + Tigger3(Golem) DNA MER2_type 2384 3029 0 621 249 192 8 chr5 66671278 66671539 -132958611 - L2 LINE L2 -1102 2212 1904 1004 283 103 57 chr5 66671586 66672060 -132958090 + MLT1G1 LTR MaLR 86 581 -14 524 315 0 7 chr5 66672080 66672223 -132957927 - L2 LINE L2 -1401 1913 1772 702 199 5 84 chr5 66672226 66672417 -132957733 + AluJb SINE Alu 135 310 -2 1713 284 104 29 chr5 66672440 66673096 -132957054 - L2 LINE L2 -1539 1775 1071 904 228 120 4 chr5 66673098 66673348 -132956802 - L2 LINE L2 -2585 729 451 725 256 99 58 chr5 66673450 66673617 -132956533 + L1ME3A LINE L1 4491 4650 -1496 2823 0 0 0 chr5 66673617 66673918 -132956232 + AluYa5 SINE Alu 1 301 -10 725 256 99 58 chr5 66673918 66674144 -132956006 + L1ME3A LINE L1 4650 4900 -1246 22 70 0 0 chr5 66674151 66674194 -132955956 + AT_rich Low_complexity Low_complexity 1 43 0 337 252 33 60 chr5 66674438 66674589 -132955561 + L1ME3A LINE L1 5176 5322 -824 243 294 138 6 chr5 66674651 66674811 -132955339 + L1ME3A LINE L1 5988 6168 -2 * 275 294 141 50 chr5 66674783 66675144 -132955006 + L1ME LINE L1 5279 5672 -498 785 284 47 0 chr5 66675190 66675422 -132954728 + MIR SINE MIR 18 260 -2 440 243 57 14 chr5 66675720 66675860 -132954290 + MLT1A1 LTR MaLR 167 312 -53 429 275 140 23 chr5 66676119 66676290 -132953860 - L2 LINE L2 0 3313 3123 244 191 0 0 chr5 66676408 66676450 -132953700 + (CAT)n Simple_repeat Simple_repeat 1 42 0 228 182 0 0 chr5 66676837 66676881 -132953269 + L1MB2 LINE L1 6115 6158 -13 255 330 63 65 chr5 66678529 66678565 -132951585 + L2 LINE L2 2723 2758 -514 2238 66 26 20 chr5 66678565 66678869 -132951281 - AluSc SINE Alu -3 306 1 255 330 63 65 chr5 66678869 66679208 -132950942 + L2 LINE L2 2758 3105 -167 252 347 0 0 chr5 66679236 66679311 -132950839 + Tigger8 DNA MER2_type 1 75 -591 224 324 28 42 chr5 66679368 66679510 -132950640 + L2 LINE L2 3118 3257 -56 397 264 155 55 chr5 66679625 66679771 -132950379 + Tigger8 DNA MER2_type 276 406 -260 2271 95 0 20 chr5 66679771 66680075 -132950075 + AluSg SINE Alu 1 298 -12 397 264 155 55 chr5 66680075 66680257 -132949893 + Tigger8 DNA MER2_type 406 637 -29 785 309 113 18 chr5 66680394 66680828 -132949322 - MLT1J LTR MaLR 0 511 37 356 205 24 16 chr5 66680940 66681067 -132949083 + CT-rich Low_complexity Low_complexity 3 130 0 243 146 0 0 chr5 66681416 66681457 -132948693 + (T)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr5 66681895 66681916 -132948234 + AT_rich Low_complexity Low_complexity 1 21 0 1115 133 123 5 chr5 66682269 66682480 -132947670 + MER46A DNA MER2_type 1 236 0 293 298 56 9 chr5 66682481 66682738 -132947412 - MIR SINE MIR 0 262 23 616 269 54 11 chr5 66682745 66682931 -132947219 - L2 LINE L2 -578 2736 2543 29 47 0 0 chr5 66682976 66683019 -132947131 + AT_rich Low_complexity Low_complexity 1 43 0 349 260 195 13 chr5 66683214 66683368 -132946782 + MIR SINE MIR 69 250 -12 25 31 0 0 chr5 66684023 66684055 -132946095 + AT_rich Low_complexity Low_complexity 1 32 0 955 173 67 112 chr5 66684804 66685117 -132945033 - MLT1A2 LTR MaLR -1 373 75 627 281 137 42 chr5 66685184 66685497 -132944653 + MARNA DNA Mariner 169 511 -75 234 262 62 21 chr5 66686558 66686703 -132943447 - L1MEc LINE L1 -4730 1666 1516 733 332 145 25 chr5 66686907 66687504 -132942646 + L2 LINE L2 2375 3051 -221 183 48 48 24 chr5 66687524 66687566 -132942584 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1258 141 3 131 chr5 66687583 66687702 -132942448 - AluJb SINE Alu -58 254 192 441 0 0 0 chr5 66687702 66687751 -132942399 + (TA)n Simple_repeat Simple_repeat 2 50 0 1258 141 3 131 chr5 66687751 66687922 -132942228 - AluJb SINE Alu -120 192 1 23 0 0 0 chr5 66688600 66688623 -132941527 + AT_rich Low_complexity Low_complexity 1 23 0 2824 13 0 0 chr5 66688697 66689006 -132941144 - AluYb8 SINE Alu -6 312 4 210 125 150 0 chr5 66690142 66690182 -132939968 - L2 LINE L2 -4 3268 3223 1138 158 98 10 chr5 66690214 66690511 -132939639 + MER33 DNA MER1_type 1 323 -1 2142 120 10 3 chr5 66690624 66690925 -132939225 - AluSx SINE Alu -9 303 1 6228 114 71 2 chr5 66691966 66692964 -132937186 - L1MC1 LINE L1 -1 6332 5266 344 250 10 10 chr5 66692964 66693060 -132937090 - L1MC4 LINE L1 -1339 6703 6608 277 158 289 0 chr5 66693060 66693136 -132937014 - L1M4 LINE L1 -864 5282 5185 2062 128 10 3 chr5 66693139 66693444 -132936706 - AluSx SINE Alu -5 307 1 337 347 115 26 chr5 66694447 66694753 -132935397 + L2 LINE L2 2658 3046 -226 2085 135 0 0 chr5 66694753 66695042 -132935108 - AluSx SINE Alu -23 289 1 337 347 115 26 chr5 66695042 66695112 -132935038 + L2 LINE L2 3046 3108 -164 1456 216 7 7 chr5 66695532 66695824 -132934326 + AluJo SINE Alu 1 292 -20 498 235 155 45 chr5 66696700 66696900 -132933250 - MIR SINE MIR 0 262 41 1368 216 20 30 chr5 66697895 66698192 -132931958 + AluJo SINE Alu 1 294 -18 790 188 0 0 chr5 66698803 66698931 -132931219 + FLAM_C SINE Alu 1 128 -5 473 352 21 0 chr5 66700613 66700758 -132929392 + MIR3 SINE MIR 19 166 -42 313 214 152 76 chr5 66700985 66701130 -132929020 - MIR SINE MIR -105 157 2 1571 158 41 0 chr5 66702023 66702289 -132927861 + MER44D DNA MER2_type 45 591 -18 292 58 0 232 chr5 66703710 66703779 -132926371 + U2 snRNA snRNA 1 53 -135 423 0 0 0 chr5 66705962 66706009 -132924141 + (TA)n Simple_repeat Simple_repeat 2 48 0 2121 131 3 7 chr5 66706572 66706869 -132923281 - AluSx SINE Alu -16 296 1 486 360 138 35 chr5 66707126 66707734 -132922416 + L2 LINE L2 2329 3036 -236 2089 88 0 44 chr5 66707734 66708029 -132922121 - AluSc SINE Alu -15 294 13 486 360 138 35 chr5 66708029 66708193 -132921957 + L2 LINE L2 3036 3182 -90 1914 285 119 22 chr5 66708552 66709560 -132920590 - L2 LINE L2 0 3313 2215 511 211 105 0 chr5 66709565 66709660 -132920490 + Tigger3(Golem) DNA MER2_type 4 108 -2921 3014 126 197 13 chr5 66709660 66709783 -132920367 + Tigger3(Golem) DNA MER2_type 2285 2384 -645 1681 183 3 16 chr5 66709783 66710095 -132920055 + AluJo SINE Alu 2 309 -3 3014 126 197 13 chr5 66710095 66710600 -132919550 + Tigger3(Golem) DNA MER2_type 2384 3029 0 621 249 192 8 chr5 66710600 66710861 -132919289 - L2 LINE L2 -1102 2212 1904 988 280 103 59 chr5 66710908 66711383 -132918767 + MLT1G1 LTR MaLR 86 581 -14 524 315 0 7 chr5 66711403 66711546 -132918604 - L2 LINE L2 -1401 1913 1772 702 199 5 84 chr5 66711549 66711740 -132918410 + AluJb SINE Alu 135 310 -2 1751 282 105 17 chr5 66711763 66712356 -132917794 - L2 LINE L2 -1539 1775 1131 1158 241 102 3 chr5 66712356 66712671 -132917479 - L2 LINE L2 -2518 796 451 725 256 99 58 chr5 66712773 66712940 -132917210 + L1ME3A LINE L1 4491 4650 -1496 2779 7 0 0 chr5 66712940 66713242 -132916908 + AluYa5 SINE Alu 1 302 -9 725 256 99 58 chr5 66713242 66713468 -132916682 + L1ME3A LINE L1 4650 4900 -1246 337 252 33 60 chr5 66713762 66713913 -132916237 + L1ME3A LINE L1 5176 5322 -824 243 294 138 6 chr5 66713975 66714135 -132916015 + L1ME3A LINE L1 5988 6168 -2 * 275 294 141 50 chr5 66714107 66714468 -132915682 + L1ME LINE L1 5279 5672 -498 785 284 47 0 chr5 66714514 66714746 -132915404 + MIR SINE MIR 18 260 -2 440 243 57 14 chr5 66715044 66715184 -132914966 + MLT1A1 LTR MaLR 167 312 -53 198 0 0 0 chr5 66715190 66715212 -132914938 + (CA)n Simple_repeat Simple_repeat 2 23 0 429 275 140 23 chr5 66715452 66715623 -132914527 - L2 LINE L2 0 3313 3123 244 191 0 0 chr5 66715741 66715783 -132914367 + (CAT)n Simple_repeat Simple_repeat 1 42 0 228 182 0 0 chr5 66716170 66716214 -132913936 + L1MB2 LINE L1 6115 6158 -13 2299 53 27 20 chr5 66717911 66718212 -132911938 - AluSc SINE Alu -6 303 1 267 316 66 63 chr5 66718224 66718551 -132911599 + L2 LINE L2 2770 3105 -167 252 347 0 0 chr5 66718579 66718654 -132911496 + Tigger8 DNA MER2_type 1 75 -591 224 324 28 42 chr5 66718711 66718853 -132911297 + L2 LINE L2 3118 3257 -56 397 264 155 55 chr5 66718968 66719114 -132911036 + Tigger8 DNA MER2_type 276 406 -260 2280 95 0 20 chr5 66719114 66719419 -132910731 + AluSg SINE Alu 1 299 -11 397 264 155 55 chr5 66719419 66719601 -132910549 + Tigger8 DNA MER2_type 406 637 -29 771 311 113 18 chr5 66719738 66720172 -132909978 - MLT1J LTR MaLR 0 511 37 371 206 23 15 chr5 66720284 66720415 -132909735 + CT-rich Low_complexity Low_complexity 3 134 0 243 146 0 0 chr5 66720764 66720805 -132909345 + (T)n Simple_repeat Simple_repeat 1 41 0 1088 132 123 9 chr5 66721616 66721828 -132908322 + MER46A DNA MER2_type 1 236 0 314 291 56 9 chr5 66721829 66722086 -132908064 - MIR SINE MIR 0 262 23 610 269 54 11 chr5 66722093 66722279 -132907871 - L2 LINE L2 -578 2736 2543 29 47 0 0 chr5 66722324 66722367 -132907783 + AT_rich Low_complexity Low_complexity 1 43 0 355 260 195 13 chr5 66722562 66722716 -132907434 + MIR SINE MIR 69 250 -12 25 31 0 0 chr5 66723371 66723403 -132906747 + AT_rich Low_complexity Low_complexity 1 32 0 965 169 67 112 chr5 66724152 66724465 -132905685 - MLT1A2 LTR MaLR -1 373 75 648 281 137 42 chr5 66724532 66724845 -132905305 + MARNA DNA Mariner 169 511 -75 249 262 62 21 chr5 66725906 66726051 -132904099 - L1MEc LINE L1 -4730 1666 1516 686 339 164 18 chr5 66726255 66726851 -132903299 + L2 LINE L2 2375 3051 -221 183 48 48 24 chr5 66726871 66726913 -132903237 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 854 132 8 0 chr5 66726930 66727051 -132903099 - AluSc SINE Alu -57 252 131 29 0 0 0 chr5 66727051 66727080 -132903070 + AT_rich Low_complexity Low_complexity 1 29 0 225 0 0 0 chr5 66727107 66727132 -132903018 + (T)n Simple_repeat Simple_repeat 1 25 0 806 144 8 0 chr5 66727132 66727264 -132902886 - AluSq/x SINE Alu -180 133 1 23 0 0 0 chr5 66727942 66727965 -132902185 + AT_rich Low_complexity Low_complexity 1 23 0 2799 16 0 0 chr5 66728039 66728353 -132901797 - AluYb8 SINE Alu -4 314 1 210 125 150 0 chr5 66729484 66729524 -132900626 - L2 LINE L2 -4 3268 3223 1149 163 105 10 chr5 66729556 66729851 -132900299 + MER33 DNA MER1_type 1 323 -1 2138 116 10 3 chr5 66729964 66730265 -132899885 - AluSx SINE Alu -9 303 1 6170 117 71 2 chr5 66731306 66732304 -132897846 - L1MC1 LINE L1 -1 6332 5266 289 206 0 22 chr5 66732304 66732396 -132897754 - L1MC4 LINE L1 -1339 6703 6614 282 145 289 0 chr5 66732423 66732499 -132897651 - L1MC1 LINE L1 -864 5282 5185 2046 125 10 3 chr5 66732502 66732807 -132897343 - AluSx SINE Alu -5 307 1 327 347 115 26 chr5 66733806 66734112 -132896038 + L2 LINE L2 2658 3046 -226 2051 135 0 0 chr5 66734112 66734401 -132895749 - AluSx SINE Alu -23 289 1 327 347 115 26 chr5 66734401 66734471 -132895679 + L2 LINE L2 3046 3108 -164 1431 216 7 7 chr5 66734891 66735183 -132894967 + AluJo SINE Alu 1 292 -20 507 235 155 45 chr5 66736059 66736259 -132893891 - MIR SINE MIR 0 262 41 1328 219 20 30 chr5 66737254 66737551 -132892599 + AluJo SINE Alu 1 294 -18 780 188 0 0 chr5 66738162 66738290 -132891860 + FLAM_C SINE Alu 1 128 -5 482 352 21 0 chr5 66739971 66740116 -132890034 + MIR3 SINE MIR 19 166 -42 312 214 152 76 chr5 66740343 66740488 -132889662 - MIR SINE MIR -105 157 2 21 0 0 0 chr5 66741241 66741262 -132888888 + AT_rich Low_complexity Low_complexity 1 21 0 1603 159 84 0 chr5 66741262 66741558 -132888592 + MER44D DNA MER2_type 1 591 -18 290 58 0 232 chr5 66742979 66743048 -132887102 + U2 snRNA snRNA 1 53 -135 189 0 0 0 chr5 66745233 66745254 -132884896 + (TA)n Simple_repeat Simple_repeat 2 22 0 2108 128 3 7 chr5 66745817 66746114 -132884036 - AluSx SINE Alu -16 296 1 310 248 87 130 chr5 66746388 66746742 -132883408 - L1ME4a LINE L1 -259 5862 5520 2056 117 3 0 chr5 66746742 66747025 -132883125 + AluSx SINE Alu 3 286 -26 310 248 87 130 chr5 66747025 66747130 -132883020 - L1ME4a LINE L1 -601 5520 5412 205 373 27 0 chr5 66748385 66748460 -132881690 + MIR SINE MIR 68 144 -64 183 279 66 0 chr5 66748641 66748702 -132881448 - L3 LINE CR1 -338 1239 1175 1486 180 17 57 chr5 66748721 66748863 -132881287 + AluJo SINE Alu 5 130 -182 2459 59 0 3 chr5 66748863 66749166 -132880984 + AluY SINE Alu 1 302 -9 1486 180 17 57 chr5 66749166 66749323 -132880827 + AluJo SINE Alu 130 292 -20 21 0 0 0 chr5 66750772 66750793 -132879357 + AT_rich Low_complexity Low_complexity 1 21 0 332 247 126 11 chr5 66751247 66751421 -132878729 - L1ME4a LINE L1 -240 5881 5688 351 250 16 55 chr5 66751438 66751566 -132878584 + MIR SINE MIR 110 232 -30 269 325 197 18 chr5 66751579 66751807 -132878343 + L2 LINE L2 1988 2256 -1058 4961 184 61 65 chr5 66752017 66752052 -132878098 + L1MB2 LINE L1 3741 3775 -2396 2266 74 7 10 chr5 66752052 66752350 -132877800 + AluSp SINE Alu 1 297 -16 4961 184 61 65 chr5 66752350 66752904 -132877246 + L1MB2 LINE L1 3775 4329 -1842 430 136 0 0 chr5 66752904 66752970 -132877180 + U3 snRNA snRNA 1 66 -151 4961 184 61 65 chr5 66752970 66753031 -132877119 + L1MB2 LINE L1 4329 4389 -1782 567 89 0 0 chr5 66753031 66753110 -132877040 + MADE1 DNA Mariner 2 80 0 4961 184 61 65 chr5 66753110 66753439 -132876711 + L1MB2 LINE L1 4389 4718 -1453 2723 130 14 5 chr5 66753439 66753863 -132876287 - MSTA LTR MaLR 0 428 1 4961 184 61 65 chr5 66753863 66754878 -132875272 + L1MB2 LINE L1 4718 5790 -381 2775 67 3 0 chr5 66754878 66755224 -132874926 - THE1A LTR MaLR 0 355 9 6553 109 9 1 chr5 66755261 66756190 -132873960 - THE1A-int LTR MaLR -644 936 1 2787 68 6 0 chr5 66756190 66756543 -132873607 - THE1A LTR MaLR 0 355 1 2023 147 46 3 chr5 66756544 66756912 -132873238 + L1MB2 LINE L1 5787 6170 -1 494 297 7 0 chr5 66756912 66757057 -132873093 + L1MC4a LINE L1 5775 5920 -1888 310 305 63 52 chr5 66757157 66757331 -132872819 + L1MC4a LINE L1 6052 6227 -1581 716 206 23 122 chr5 66757342 66757551 -132872599 + L1MC5 LINE L1 7489 7717 -244 691 184 8 8 chr5 66757551 66757676 -132872474 - FLAM_A SINE Alu -5 128 4 2084 130 7 0 chr5 66757683 66757983 -132872167 - AluSp SINE Alu -11 302 1 716 206 23 122 chr5 66757983 66758198 -132871952 + L1MC5 LINE L1 7723 7878 -83 752 59 59 0 chr5 66758249 66758350 -132871800 - U6 snRNA snRNA 0 107 1 1319 239 70 17 chr5 66758784 66759199 -132870951 + L1ME3A LINE L1 5734 6170 0 255 304 0 14 chr5 66759339 66759408 -132870742 + L2 LINE L2 3184 3251 -62 * 1405 268 68 88 chr5 66759379 66759760 -132870390 + L2 LINE L2 2378 2765 -548 1525 162 22 22 chr5 66759760 66760032 -132870118 + AluJb SINE Alu 11 282 -30 1405 268 68 88 chr5 66760032 66760611 -132869539 + L2 LINE L2 2765 3313 0 1547 142 99 37 chr5 66760890 66761243 -132868907 + THE1C LTR MaLR 1 375 0 1033 206 85 7 chr5 66761532 66761804 -132868346 - LTR50 LTR ERVL 0 795 503 598 226 73 0 chr5 66761828 66761965 -132868185 - LTR50 LTR ERVL -648 147 1 194 368 18 70 chr5 66762438 66762609 -132867541 - L2 LINE L2 -224 3048 2887 1219 162 0 5 chr5 66763120 66763317 -132866833 + AluJb SINE Alu 86 281 -31 813 293 95 124 chr5 66763317 66764322 -132865828 + L2 LINE L2 2208 3180 -92 194 300 111 11 chr5 66765923 66766013 -132864137 - MER5A DNA MER1_type -18 171 73 253 226 0 0 chr5 66766047 66766100 -132864050 - MER5B DNA MER1_type -125 53 1 1717 180 3 3 chr5 66766125 66766436 -132863714 + AluSx SINE Alu 1 311 -1 21 71 0 0 chr5 66766605 66766647 -132863503 + AT_rich Low_complexity Low_complexity 1 42 0 2089 137 0 0 chr5 66768040 66768340 -132861810 + AluSx SINE Alu 1 300 -12 604 126 63 18 chr5 66768363 66768474 -132861676 + L1MB3 LINE L1 6068 6183 0 1836 152 0 13 chr5 66768488 66768790 -132861360 - AluSx SINE Alu -14 298 1 285 225 14 0 chr5 66768862 66768933 -132861217 + MER112 DNA MER1_type 8 79 -181 865 291 53 28 chr5 66769409 66769767 -132860383 - MLT1I LTR MaLR -38 371 5 2208 107 13 0 chr5 66769952 66770252 -132859898 + AluSx SINE Alu 1 304 -8 1977 149 3 0 chr5 66770308 66770610 -132859540 - AluSq SINE Alu -10 303 1 1060 240 111 57 chr5 66773280 66773389 -132856761 + L1MC4a LINE L1 5317 5419 -2389 2155 121 0 10 chr5 66773389 66773695 -132856455 + AluSx SINE Alu 1 303 -9 1060 240 111 57 chr5 66773695 66774073 -132856077 + L1MC4a LINE L1 5419 5830 -1978 758 139 0 2 chr5 66774383 66774631 -132855519 + AluJ SINE Alu 1 294 -18 2296 91 0 0 chr5 66774660 66774946 -132855204 + AluY SINE Alu 1 286 -25 23 54 0 0 chr5 66775388 66775425 -132854725 + AT_rich Low_complexity Low_complexity 1 37 0 1824 149 0 18 chr5 66775425 66775706 -132854444 - AluJb SINE Alu -20 292 17 1993 117 0 48 chr5 66775754 66776070 -132854080 - AluSx SINE Alu -11 301 1 431 257 171 20 chr5 66776810 66776962 -132853188 + MER5B DNA MER1_type 1 175 -3 220 241 404 0 chr5 66777291 66777432 -132852718 + MIR SINE MIR 20 217 -45 216 0 0 0 chr5 66778300 66778324 -132851826 + (T)n Simple_repeat Simple_repeat 1 24 0 304 209 66 77 chr5 66779821 66779912 -132850238 - MIR SINE MIR -150 112 23 2269 84 7 0 chr5 66780046 66780345 -132849805 + AluY SINE Alu 1 301 -10 2223 84 40 0 chr5 66780451 66780750 -132849400 + AluSx SINE Alu 1 311 -1 1690 142 20 0 chr5 66780976 66781230 -132848920 + AluSx SINE Alu 39 297 -15 2133 91 0 42 chr5 66782051 66782359 -132847791 - AluSg SINE Alu -14 296 2 1351 103 29 29 chr5 66782414 66782618 -132847532 - AluSg/x SINE Alu -15 297 94 199 267 0 0 chr5 66782840 66782885 -132847265 - MIR3 SINE MIR -26 182 138 300 253 189 0 chr5 66784661 66784756 -132845394 - L2 LINE L2 -5 3308 3196 2093 139 15 3 chr5 66784951 66785288 -132844862 - L1PA15 LINE L1 0 6165 5825 1182 130 0 83 chr5 66785633 66785849 -132844301 + AluJb SINE Alu 84 281 -31 21 0 0 0 chr5 66786091 66786112 -132844038 + AT_rich Low_complexity Low_complexity 1 21 0 611 279 40 36 chr5 66786130 66786352 -132843798 + MIR SINE MIR 36 258 -4 198 225 0 25 chr5 66786685 66786725 -132843425 - L2 LINE L2 -271 3042 3004 2213 57 46 3 chr5 66786872 66787154 -132842996 - AluY SINE Alu -17 294 1 2559 59 0 0 chr5 66787564 66787868 -132842282 - AluY SINE Alu -7 304 1 303 315 61 24 chr5 66787921 66788134 -132842016 - L1M4 LINE L1 -1350 4796 4576 2135 108 7 29 chr5 66788192 66788498 -132841652 + AluSx SINE Alu 1 299 -13 283 281 22 0 chr5 66789630 66789719 -132840431 + L1ME LINE L1 5778 5868 -253 1993 133 7 0 chr5 66789725 66790018 -132840132 - AluSx SINE Alu -12 300 6 2477 76 0 0 chr5 66790935 66791236 -132838914 + AluY SINE Alu 5 305 -6 2341 93 0 16 chr5 66791418 66791728 -132838422 + AluSx SINE Alu 1 305 -7 2228 96 37 64 chr5 66792173 66792385 -132837765 - THE1B LTR MaLR 0 364 165 2055 138 0 13 chr5 66792385 66792690 -132837460 + AluSx SINE Alu 1 301 -11 2228 96 37 64 chr5 66792690 66792851 -132837299 - THE1B LTR MaLR -199 165 1 22 80 0 0 chr5 66792909 66792959 -132837191 + AT_rich Low_complexity Low_complexity 1 50 0 1530 189 24 10 chr5 66792961 66793258 -132836892 + AluJo SINE Alu 1 301 -11 205 321 0 0 chr5 66793559 66793615 -132836535 - L3 LINE CR1 -6 1571 1516 729 211 116 0 chr5 66793692 66793839 -132836311 + MER58B DNA MER1_type 2 165 -176 692 191 15 0 chr5 66793839 66793970 -132836180 + FLAM_C SINE Alu 1 133 -10 978 185 16 11 chr5 66793971 66794160 -132835990 + MER58B DNA MER1_type 151 340 -1 1903 179 0 0 chr5 66794508 66794816 -132835334 - AluJo SINE Alu -4 308 1 1435 194 14 34 chr5 66795005 66795330 -132834820 + AluJo SINE Alu 1 319 0 236 178 0 68 chr5 66795532 66795605 -132834545 - L1P LINE L1 -2736 3410 3343 2427 78 0 0 chr5 66795622 66795917 -132834233 + AluSx SINE Alu 1 295 -17 362 282 144 25 chr5 66796054 66796256 -132833894 - L1M4 LINE L1 -2983 3163 2938 822 194 69 11 chr5 66796277 66796452 -132833698 - AluJo SINE Alu -37 275 91 31 0 0 0 chr5 66796465 66796496 -132833654 + AT_rich Low_complexity Low_complexity 1 31 0 300 246 94 56 chr5 66796641 66796929 -132833221 - L1M4 LINE L1 -3190 2956 2658 2589 55 3 0 chr5 66797118 66797428 -132832722 + AluY SINE Alu 1 311 0 419 319 60 26 chr5 66797506 66797772 -132832378 - HAL1b LINE L1 -731 617 343 635 138 0 0 chr5 66797834 66797928 -132832222 - AluSq SINE Alu -88 225 132 2129 119 3 0 chr5 66798184 66798479 -132831671 + AluSx SINE Alu 3 298 -14 2414 90 0 3 chr5 66798496 66798806 -132831344 + AluSq SINE Alu 1 309 -4 802 221 91 35 chr5 66798807 66799006 -132831144 + MIR SINE MIR 53 262 0 2366 61 0 0 chr5 66799111 66799411 -132830739 + AluY SINE Alu 1 300 0 659 210 113 65 chr5 66799553 66799801 -132830349 - L2 LINE L2 0 3313 3054 974 195 94 46 chr5 66799982 66800611 -132829539 - L1MC4 LINE L1 -1200 6608 6007 325 322 46 11 chr5 66801529 66801616 -132828534 + MIR SINE MIR 28 117 -145 212 375 34 0 chr5 66801831 66801919 -132828231 + L2 LINE L2 2993 3083 -189 290 263 38 31 chr5 66802295 66802455 -132827695 - L1ME4a LINE L1 -69 6052 5892 1932 160 0 3 chr5 66802521 66802815 -132827335 + AluJb SINE Alu 1 293 -19 373 270 131 29 chr5 66802933 66803301 -132826849 - L1ME4a LINE L1 -460 5661 5255 2444 73 0 7 chr5 66803446 66803746 -132826404 - AluY SINE Alu -13 298 1 2456 89 0 0 chr5 66803746 66804050 -132826100 - AluSq SINE Alu -9 304 1 1048 202 162 0 chr5 66804728 66804975 -132825175 + AluJb SINE Alu 2 288 -14 2393 90 3 0 chr5 66805439 66805751 -132824399 - AluSq SINE Alu 0 313 1 225 94 0 0 chr5 66805913 66805945 -132824205 + (T)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr5 66809250 66809273 -132820877 + AT_rich Low_complexity Low_complexity 1 23 0 2305 109 0 0 chr5 66810214 66810516 -132819634 + AluSg SINE Alu 1 302 -8 1026 129 7 0 chr5 66810517 66810664 -132819486 + AluSg/x SINE Alu 132 279 -31 2189 109 7 0 chr5 66810688 66810981 -132819169 + AluSx SINE Alu 1 295 -17 26 74 0 0 chr5 66811205 66811259 -132818891 + AT_rich Low_complexity Low_complexity 1 54 0 750 148 51 152 chr5 66812176 66812295 -132817855 - L1MC2 LINE L1 -11 6333 6204 252 77 0 0 chr5 66812295 66812334 -132817816 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 750 148 51 152 chr5 66812334 66812354 -132817796 - L1MC2 LINE L1 -140 6204 6184 1582 153 0 24 chr5 66812354 66812608 -132817542 - AluSx SINE Alu -64 248 1 750 148 51 152 chr5 66812608 66812724 -132817426 - L1MC2 LINE L1 -160 6184 6103 415 197 128 26 chr5 66812726 66812843 -132817307 - FLAM_A SINE Alu 0 142 14 571 139 50 0 chr5 66812843 66812944 -132817206 - L1MC2 LINE L1 -239 6105 6000 189 342 0 26 chr5 66813006 66813082 -132817068 - MIR SINE MIR -71 191 118 1498 192 75 7 chr5 66813289 66813581 -132816569 + AluJo SINE Alu 1 312 0 634 110 0 73 chr5 66813923 66814032 -132816118 + FRAM SINE Alu 63 163 -13 23 0 0 0 chr5 66817092 66817115 -132813035 + AT_rich Low_complexity Low_complexity 1 23 0 645 202 0 8 chr5 66818506 66818630 -132811520 - MER58B DNA MER1_type 0 341 219 911 99 0 8 chr5 66818667 66818788 -132811362 + AluSg/x SINE Alu 172 291 -21 1387 239 74 11 chr5 66820444 66820904 -132809246 - L1M4 LINE L1 -2429 3717 3229 371 298 61 22 chr5 66821276 66821457 -132808693 + MER5A DNA MER1_type 2 189 0 2201 96 10 3 chr5 66821533 66821836 -132808314 - AluSx SINE Alu -7 305 1 1702 146 28 21 chr5 66821911 66822045 -132808105 + AluSq SINE Alu 1 133 -180 2376 70 3 3 chr5 66822045 66822343 -132807807 + AluSc SINE Alu 1 298 -11 960 170 13 0 chr5 66822343 66822496 -132807654 + AluSc SINE Alu 132 286 -23 23 0 0 0 chr5 66822691 66822714 -132807436 + AT_rich Low_complexity Low_complexity 1 23 0 202 308 90 0 chr5 66825037 66825115 -132805035 + MIR SINE MIR 80 164 -98 186 43 0 0 chr5 66825223 66825246 -132804904 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 1573 150 114 16 chr5 66826927 66827233 -132802917 + MER1B DNA MER1_type 2 337 0 2196 118 0 0 chr5 66827246 66827535 -132802615 - AluSx SINE Alu -18 294 6 181 333 115 10 chr5 66828670 66828766 -132801384 + MER5B DNA MER1_type 28 133 -45 17728 130 38 39 chr5 66829171 66829828 -132800322 + L1PA11 LINE L1 1727 2383 -3791 646 143 0 0 chr5 66829828 66829926 -132800224 + AluSg/x SINE Alu 206 303 -6 17728 130 38 39 chr5 66829926 66832925 -132797225 + L1PA11 LINE L1 2383 5471 -703 2055 129 19 13 chr5 66832925 66833236 -132796914 + AluSq SINE Alu 1 313 0 17728 130 38 39 chr5 66833236 66833939 -132796211 + L1PA11 LINE L1 5471 6174 0 2233 118 0 10 chr5 66835274 66835579 -132794571 + AluSq SINE Alu 1 302 -11 1881 319 191 33 chr5 66835612 66836408 -132793742 - L2 LINE L2 -204 3109 2440 3012 190 48 16 chr5 66836408 66837040 -132793110 + MER82 DNA MER2_type 2 653 0 1881 319 191 33 chr5 66837040 66837269 -132792881 - L2 LINE L2 -873 2440 2248 2376 67 0 0 chr5 66837269 66837551 -132792599 + AluY SINE Alu 21 302 -9 1881 319 191 33 chr5 66837551 66837670 -132792480 - L2 LINE L2 -1065 2248 2149 2098 144 3 0 chr5 66837670 66837968 -132792182 - AluJb SINE Alu -13 299 1 1881 319 191 33 chr5 66837968 66838143 -132792007 - L2 LINE L2 -1164 2149 2003 2183 122 0 0 chr5 66838143 66838437 -132791713 - AluSx SINE Alu -18 294 1 1881 319 191 33 chr5 66838437 66838740 -132791410 - L2 LINE L2 -1310 2003 1227 815 142 0 8 chr5 66840109 66840243 -132789907 - FLAM_C SINE Alu 0 133 1 2315 109 0 0 chr5 66841341 66841653 -132788497 - AluSx SINE Alu 0 312 1 31 0 0 0 chr5 66841754 66841785 -132788365 + AT_rich Low_complexity Low_complexity 1 31 0 2393 70 0 10 chr5 66842393 66842694 -132787456 - AluY SINE Alu -13 298 1 404 236 65 24 chr5 66843200 66843323 -132786827 - L2 LINE L2 -1 3312 3185 191 324 70 28 chr5 66843456 66843598 -132786552 + L3 LINE CR1 803 950 -627 1829 171 0 4 chr5 66843740 66844021 -132786129 + AluJb SINE Alu 1 280 -32 308 294 81 31 chr5 66844095 66844255 -132785895 + L1M4 LINE L1 2231 2398 -3748 307 267 11 44 chr5 66844345 66844435 -132785715 + L1MC4a LINE L1 6021 6107 -1701 1320 270 55 25 chr5 66844464 66844993 -132785157 + L1MC4a LINE L1 6281 6825 -983 342 71 36 0 chr5 66845009 66845065 -132785085 - Alu SINE Alu -4 297 240 1094 95 0 14 chr5 66845065 66845213 -132784937 - AluSq/x SINE Alu -166 146 1 2330 48 38 7 chr5 66845243 66845536 -132784614 + AluY SINE Alu 1 302 -9 1511 257 61 54 chr5 66845547 66846338 -132783812 + L1MC4 LINE L1 6935 7730 -312 1623 144 66 0 chr5 66846508 66846764 -132783386 + AluSx SINE Alu 1 273 -39 237 139 0 0 chr5 66846777 66846820 -132783330 + (GGGAA)n Simple_repeat Simple_repeat 2 44 0 726 177 0 32 chr5 66846832 66847018 -132783132 + GA-rich Low_complexity Low_complexity 1 180 0 239 388 34 63 chr5 66847241 66847447 -132782703 - L2 LINE L2 -8 3264 3065 1072 155 19 34 chr5 66847455 66847661 -132782489 + MER3 DNA MER1_type 5 207 -2 2019 104 42 7 chr5 66847732 66848019 -132782131 + AluSq SINE Alu 1 297 -16 2034 93 0 7 chr5 66848057 66848326 -132781824 - AluSq SINE Alu -10 303 37 647 236 89 0 chr5 66849392 66849570 -132780580 - MIR SINE MIR -36 226 32 216 312 136 18 chr5 66849653 66849874 -132780276 + L2 LINE L2 2861 3107 -165 205 253 143 55 chr5 66850118 66850209 -132779941 - L2 LINE L2 -5 3267 3169 868 228 93 0 chr5 66851384 66851630 -132778520 + L1ME2 LINE L1 5728 5996 -168 275 146 38 13 chr5 66851651 66851720 -132778430 - AluSq SINE Alu -130 173 135 398 216 26 9 chr5 66851721 66851837 -132778313 + L1ME2 LINE L1 6035 6152 -12 753 251 6 11 chr5 66851923 66852098 -132778052 - MIR SINE MIR -50 212 39 5905 117 9 4 chr5 66852102 66853124 -132777026 + L1PB3 LINE L1 5124 6148 -6 199 200 0 0 chr5 66853142 66853182 -132776968 - MIR SINE MIR -217 45 6 757 146 81 0 chr5 66853219 66853342 -132776808 - AluSq SINE Alu -180 133 1 446 340 59 77 chr5 66853358 66853971 -132776179 + L3 LINE CR1 667 1290 -287 2430 46 0 46 chr5 66853971 66854296 -132775854 + AluY SINE Alu 1 310 -1 446 340 59 77 chr5 66854296 66854312 -132775838 + L3 LINE CR1 1290 1305 -272 2239 129 0 0 chr5 66854312 66854623 -132775527 + AluSx SINE Alu 1 311 -1 446 340 59 77 chr5 66854623 66854754 -132775396 + L3 LINE CR1 1305 1414 -163 1017 146 5 44 chr5 66855167 66855215 -132774935 - MER3 DNA MER1_type -4 205 157 2428 66 0 3 chr5 66855215 66855517 -132774633 - AluY SINE Alu -10 301 1 1017 146 5 44 chr5 66855517 66855673 -132774477 - MER3 DNA MER1_type -52 157 9 858 258 86 62 chr5 66855681 66856147 -132774003 - LTR33A LTR ERVL -45 478 2 916 144 80 58 chr5 66856174 66856362 -132773788 - MLT1A1 LTR MaLR -171 194 3 349 292 62 40 chr5 66856362 66856807 -132773343 + L1MC/D LINE L1 5329 5790 -331 206 308 51 26 chr5 66856813 66856891 -132773259 - L2 LINE L2 -8 3264 3185 1828 141 3 59 chr5 66857008 66857328 -132772822 + AluSx SINE Alu 1 302 -10 2316 53 7 3 chr5 66857340 66857662 -132772488 + AluY SINE Alu 1 323 0 275 186 35 23 chr5 66857693 66857779 -132772371 + L1ME4a LINE L1 5998 6084 -37 1844 167 3 35 chr5 66858747 66859064 -132771086 + AluJb SINE Alu 3 309 -3 702 192 0 68 chr5 66859268 66859330 -132770820 + L1MB8 LINE L1 6002 6067 -111 1890 148 3 30 chr5 66859330 66859634 -132770516 + AluJb SINE Alu 1 296 -16 702 192 0 68 chr5 66859634 66859748 -132770402 + L1MB8 LINE L1 6067 6166 -12 2301 123 0 0 chr5 66860134 66860444 -132769706 + AluSx SINE Alu 1 310 -2 2169 114 7 7 chr5 66860563 66860870 -132769280 + AluSx SINE Alu 1 307 -5 369 0 0 0 chr5 66860980 66861021 -132769129 + (CA)n Simple_repeat Simple_repeat 2 42 0 2288 103 0 0 chr5 66861025 66861317 -132768833 - AluSc SINE Alu -17 292 1 2076 137 3 0 chr5 66862344 66862643 -132767507 + AluJb SINE Alu 1 300 -12 21 57 0 0 chr5 66862848 66862883 -132767267 + AT_rich Low_complexity Low_complexity 1 35 0 2351 92 0 0 chr5 66862967 66863261 -132766889 - AluSc SINE Alu -15 294 1 966 167 7 0 chr5 66863334 66863484 -132766666 - AluJo SINE Alu -161 151 1 2143 111 3 20 chr5 66864295 66864601 -132765549 + AluSg SINE Alu 1 301 -9 1218 106 0 0 chr5 66864601 66864762 -132765388 + AluSg/x SINE Alu 133 293 -17 1445 173 3 79 chr5 66865550 66865879 -132764271 + AluJo SINE Alu 1 304 -8 182 357 0 0 chr5 66866001 66866043 -132764107 + MIR SINE MIR 30 71 -137 248 237 0 34 chr5 66866837 66866896 -132763254 + C-rich Low_complexity Low_complexity 5 61 0 1739 161 23 23 chr5 66866896 66867201 -132762949 - AluJo SINE Alu -6 306 2 1614 160 21 78 chr5 66867330 66867661 -132762489 + AluSx SINE Alu 1 312 0 24 0 0 0 chr5 66867681 66867705 -132762445 + AT_rich Low_complexity Low_complexity 1 24 0 577 246 32 43 chr5 66867826 66868013 -132762137 - L2 LINE L2 0 3313 3129 2141 118 0 3 chr5 66868117 66868414 -132761736 + AluSx SINE Alu 1 296 -16 7070 254 116 24 chr5 66869130 66869345 -132760805 - L2 LINE L2 -4 3309 3115 2257 92 0 0 chr5 66869345 66869654 -132760496 - AluSx SINE Alu 0 309 1 7070 254 116 24 chr5 66869654 66871749 -132758401 - L2 LINE L2 -198 3115 737 842 131 162 61 chr5 66871749 66871947 -132758203 - MER20 DNA MER1_type -1 218 1 7070 254 116 24 chr5 66871947 66872180 -132757970 - L2 LINE L2 -2576 737 527 188 244 73 0 chr5 66872200 66872241 -132757909 - MIR SINE MIR -132 76 33 2043 128 0 22 chr5 66872892 66873204 -132756946 + AluJb SINE Alu 1 305 -7 392 317 108 11 chr5 66873590 66873655 -132756495 + MIR SINE MIR 47 104 -158 2175 135 3 0 chr5 66873655 66873966 -132756184 - AluSx SINE Alu 0 312 1 392 317 108 11 chr5 66873966 66874086 -132756064 + MIR SINE MIR 104 250 -12 272 230 14 0 chr5 66875710 66875784 -132754366 + G-rich Low_complexity Low_complexity 3 77 0 2718 33 0 3 chr5 66877117 66877424 -132752726 + AluY SINE Alu 1 306 -5 894 163 87 60 chr5 66877424 66877676 -132752474 - Charlie1a DNA MER1_type -3 1452 1194 3414 154 92 16 chr5 66877691 66878368 -132751782 - L1MB4 LINE L1 0 6180 5453 2560 51 0 13 chr5 66878374 66878688 -132751462 - AluY SINE Alu 0 311 2 5661 180 39 45 chr5 66878691 66879415 -132750735 - Charlie1a DNA MER1_type -1557 1204 488 2600 53 0 0 chr5 66879415 66879715 -132750435 + AluY SINE Alu 1 300 -11 5661 180 39 45 chr5 66879715 66880201 -132749949 - Charlie1a DNA MER1_type -2273 488 1 289 284 125 0 chr5 66880649 66880737 -132749413 + MIR SINE MIR 30 128 -80 1636 168 10 24 chr5 66880763 66881054 -132749096 - AluJo SINE Alu -25 287 1 211 241 0 37 chr5 66881054 66881108 -132749042 + MIR3 SINE MIR 122 173 -35 2069 131 7 3 chr5 66881346 66881652 -132748498 - AluSx SINE Alu -5 307 1 327 265 39 69 chr5 66881669 66881873 -132748277 - L1ME4a LINE L1 -2 6119 5922 671 333 66 8 chr5 66881889 66882268 -132747882 - L1ME4a LINE L1 -307 5814 5414 2105 137 0 0 chr5 66882429 66882728 -132747422 - AluJb SINE Alu -13 299 1 2356 97 0 3 chr5 66882949 66883258 -132746892 - AluSg SINE Alu -2 308 1 488 226 43 9 chr5 66883505 66883620 -132746530 + MIR SINE MIR 32 150 -112 1169 299 85 32 chr5 66883630 66884091 -132746059 - L2 LINE L2 0 3313 2829 2153 127 16 0 chr5 66884127 66884434 -132745716 - AluSx SINE Alu 0 312 1 1652 239 118 31 chr5 66884515 66885005 -132745145 - MLT1H LTR MaLR -16 533 1 2063 158 0 0 chr5 66885321 66885632 -132744518 - AluJb SINE Alu 0 312 2 1871 141 7 17 chr5 66887310 66887469 -132742681 - AluSx SINE Alu -18 294 138 2139 91 0 0 chr5 66887469 66887745 -132742405 - AluY SINE Alu -1 310 35 1871 141 7 17 chr5 66887745 66887882 -132742268 - AluSx SINE Alu -174 138 1 1975 104 19 2 chr5 66888609 66888914 -132741236 + THE1C LTR MaLR 1 375 0 1019 268 107 25 chr5 66889845 66890368 -132739782 - L1ME LINE L1 -347 5823 5258 1583 190 0 15 chr5 66890411 66890685 -132739465 + AluJb SINE Alu 11 280 -32 377 321 7 22 chr5 66890727 66890864 -132739286 - L2 LINE L2 -17 3296 3162 263 326 37 37 chr5 66891007 66891142 -132739008 + L2 LINE L2 3179 3313 0 1843 166 10 3 chr5 66891431 66891732 -132738418 + AluJb SINE Alu 1 303 -9 1618 187 40 3 chr5 66891884 66892184 -132737966 + AluJb SINE Alu 1 311 -1 807 121 19 83 chr5 66892186 66892343 -132737807 - L1MA8 LINE L1 -181 6110 5964 1093 133 0 0 chr5 66892344 66892494 -132737656 - AluSx SINE Alu -17 295 146 576 108 43 0 chr5 66892498 66892637 -132737513 + (TA)n Simple_repeat Simple_repeat 1 145 0 1075 119 0 0 chr5 66892642 66892785 -132737365 - AluSx SINE Alu -169 143 1 4115 189 31 45 chr5 66892786 66893687 -132736463 - L1MA8 LINE L1 -321 5970 5058 1984 172 80 44 chr5 66893687 66894099 -132736051 - MSTC LTR MaLR 0 428 2 4115 189 31 45 chr5 66894099 66894450 -132735700 - L1MA8 LINE L1 -1233 5058 4750 2102 112 20 13 chr5 66894450 66894754 -132735396 - AluSx SINE Alu -6 306 1 4115 189 31 45 chr5 66894754 66894937 -132735213 - L1MA8 LINE L1 -1541 4750 4566 189 264 0 56 chr5 66897516 66897588 -132732562 + L2 LINE L2 3016 3083 -189 993 196 252 0 chr5 66897650 66897880 -132732270 - AluSx SINE Alu -24 288 1 1883 132 85 0 chr5 66898199 66898480 -132731670 + AluSx SINE Alu 1 305 -7 577 226 181 0 chr5 66899011 66899188 -132730962 + MIR SINE MIR 20 228 -34 269 305 154 24 chr5 66899184 66899430 -132730720 - L2 LINE L2 -372 2942 2665 * 1250 298 72 76 chr5 66899430 66900305 -132729845 - L2 LINE L2 -838 2476 1604 2598 53 0 0 chr5 66900305 66900605 -132729545 + AluY SINE Alu 1 300 -11 1250 298 72 76 chr5 66900605 66900880 -132729270 - L2 LINE L2 -1710 1604 1330 229 327 0 0 chr5 66901108 66901163 -132728987 - Zaphod DNA AcHobo -1 4030 3976 * 884 293 136 21 chr5 66901158 66901496 -132728654 - MER115 DNA AcHobo -270 423 47 2405 91 0 0 chr5 66901501 66901798 -132728352 + AluSx SINE Alu 1 297 -15 332 363 127 28 chr5 66901849 66902060 -132728090 - L2 LINE L2 -2338 976 787 1829 150 37 13 chr5 66902060 66902360 -132727790 + AluJo SINE Alu 1 307 -5 332 363 127 28 chr5 66902360 66902440 -132727710 - L2 LINE L2 -2527 787 716 2760 100 11 3 chr5 66902440 66902801 -132727349 + THE1B LTR MaLR 1 364 0 332 363 127 28 chr5 66902801 66903180 -132726970 - L2 LINE L2 -2598 716 239 950 214 66 0 chr5 66903746 66903942 -132726208 + MER3 DNA MER1_type 1 209 0 1766 181 10 16 chr5 66904019 66904397 -132725753 + AluJo SINE Alu 1 376 0 1710 178 14 7 chr5 66905540 66905833 -132724317 + AluJb SINE Alu 1 295 -17 969 124 14 0 chr5 66906670 66906815 -132723335 + L1MA6 LINE L1 6154 6300 0 2055 144 0 3 chr5 66906949 66907248 -132722902 + AluSx SINE Alu 1 298 -14 220 345 107 54 chr5 66908097 66908576 -132721574 + L2 LINE L2 242 745 -2569 273 347 107 16 chr5 66909442 66909750 -132720400 + L2 LINE L2 1729 2064 -1250 185 271 69 83 chr5 66909780 66909998 -132720152 + L2 LINE L2 2258 2472 -842 239 282 48 48 chr5 66910112 66910215 -132719935 + L2 LINE L2 2672 2774 -540 750 192 15 8 chr5 66910254 66910384 -132719766 - FLAM_C SINE Alu -11 132 2 278 335 65 96 chr5 66910478 66910771 -132719379 + L2 LINE L2 2987 3270 -2 * 378 248 47 60 chr5 66910753 66910902 -132719248 + MIR SINE MIR 75 221 -41 * 1086 229 45 8 chr5 66910892 66911137 -132719013 + MIR SINE MIR 7 260 -2 199 49 49 49 chr5 66911169 66911210 -132718940 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 1851 164 0 10 chr5 66911533 66911825 -132718325 + AluJo SINE Alu 1 289 -23 28 0 0 0 chr5 66912052 66912080 -132718070 + AT_rich Low_complexity Low_complexity 1 28 0 779 261 45 17 chr5 66912603 66912890 -132717260 + L1ME4a LINE L1 5561 5855 -266 789 208 84 117 chr5 66912932 66912968 -132717182 - MLT2D LTR ERVL -4 516 480 255 31 0 0 chr5 66912968 66913000 -132717150 + (TG)n Simple_repeat Simple_repeat 2 33 0 789 208 84 117 chr5 66913000 66913379 -132716771 - MLT2D LTR ERVL -40 480 63 285 214 107 9 chr5 66913379 66913491 -132716659 + L1ME4a LINE L1 5987 6109 -12 1784 159 0 37 chr5 66914110 66914406 -132715744 - AluJo SINE Alu -27 285 1 2103 135 3 0 chr5 66914862 66915165 -132714985 - AluSq SINE Alu 0 313 10 1905 140 0 57 chr5 66915985 66916299 -132713851 + AluJb SINE Alu 1 296 -16 25 0 0 0 chr5 66917363 66917388 -132712762 + AT_rich Low_complexity Low_complexity 1 25 0 1692 102 0 9 chr5 66917904 66918129 -132712021 + AluSg/x SINE Alu 76 298 -12 1877 138 0 80 chr5 66918683 66918818 -132711332 + AluJb SINE Alu 1 145 -167 2325 103 0 0 chr5 66918818 66919119 -132711031 + AluSq SINE Alu 1 301 -12 1877 138 0 80 chr5 66919119 66919310 -132710840 + AluJb SINE Alu 145 301 -11 695 236 11 35 chr5 66919565 66919739 -132710411 - MLT1G LTR MaLR -6 561 392 1853 141 52 36 chr5 66919791 66920153 -132709997 - THE1C LTR MaLR 0 375 8 10332 121 19 38 chr5 66920161 66921766 -132708384 - THE1C-int LTR MaLR -3 1577 4 2001 140 47 16 chr5 66921769 66922133 -132708017 - THE1C LTR MaLR 0 375 1 1102 206 60 129 chr5 66922134 66922552 -132707598 - MLT1B LTR MaLR 0 390 2 901 248 83 38 chr5 66922552 66922837 -132707313 - MLT1G LTR MaLR -282 308 10 1903 118 14 7 chr5 66922848 66923128 -132707022 + L1MA1 LINE L1 6015 6296 -6 271 335 113 0 chr5 66923273 66923406 -132706744 - MIR SINE MIR -67 195 47 259 300 82 55 chr5 66923405 66923515 -132706635 + L2 LINE L2 3151 3263 -9 * 954 261 84 31 chr5 66923810 66924553 -132705597 + L1MC3 LINE L1 5184 5984 -180 915 163 0 0 chr5 66925317 66925458 -132704692 + AluJo SINE Alu 1 141 -171 21 36 0 0 chr5 66925494 66925522 -132704628 + AT_rich Low_complexity Low_complexity 1 28 0 1095 169 0 0 chr5 66926225 66926479 -132703671 - AluSg/x SINE Alu 0 388 135 883 202 6 17 chr5 66926526 66926699 -132703451 - AluJb SINE Alu -5 307 137 1804 157 20 23 chr5 66926710 66927015 -132703135 - AluJb SINE Alu -8 304 1 1964 157 0 0 chr5 66927243 66927530 -132702620 + AluJb SINE Alu 1 287 -25 282 250 138 0 chr5 66927665 66927745 -132702405 + MIR SINE MIR 70 160 -102 24 0 0 0 chr5 66928288 66928312 -132701838 + AT_rich Low_complexity Low_complexity 1 24 0 1949 157 14 0 chr5 66928312 66928605 -132701545 - AluSx SINE Alu -15 297 1 219 357 0 12 chr5 66929423 66929507 -132700643 + L3b LINE CR1 1249 1331 -252 2075 126 7 3 chr5 66929553 66929847 -132700303 + AluSx SINE Alu 1 295 -17 1158 171 78 0 chr5 66931177 66931394 -132698756 + MER46A DNA MER2_type 3 236 0 231 288 119 35 chr5 66932155 66932381 -132697769 - MLT1L LTR MaLR 0 615 371 863 195 22 16 chr5 66932702 66932887 -132697263 - MER5A DNA MER1_type 0 189 4 214 286 0 0 chr5 66933211 66933267 -132696883 - L2 LINE L2 0 3313 3258 1507 138 0 0 chr5 66933504 66933707 -132696443 - AluSx SINE Alu -108 204 2 2221 97 0 0 chr5 66934248 66934554 -132695596 - AluSc SINE Alu 0 306 1 707 186 102 0 chr5 66936694 66936871 -132693279 + L1MB4 LINE L1 5957 6151 -29 438 254 135 23 chr5 66936943 66937159 -132692991 - MLT1J LTR MaLR -168 278 62 874 161 0 14 chr5 66937160 66937303 -132692847 + FLAM_C SINE Alu 1 141 -2 238 203 0 34 chr5 66937307 66937366 -132692784 - MLT1J LTR MaLR -446 65 9 891 279 21 8 chr5 66937497 66937737 -132692413 - MIR SINE MIR 0 262 20 28 61 0 0 chr5 66937852 66937901 -132692249 + AT_rich Low_complexity Low_complexity 1 49 0 1098 157 207 63 chr5 66937963 66938282 -132691868 - MLT1A1 LTR MaLR 0 365 1 3368 154 30 30 chr5 66938283 66938946 -132691204 - L1MB3 LINE L1 -71 6112 5450 272 87 0 0 chr5 66938948 66938994 -132691156 + L1MB4 LINE L1 6134 6179 -1 182 358 0 0 chr5 66939586 66939653 -132690497 - L2 LINE L2 -1 3271 3205 22 94 0 0 chr5 66939929 66939993 -132690157 + AT_rich Low_complexity Low_complexity 1 64 0 217 390 42 0 chr5 66940056 66940151 -132689999 - L2 LINE L2 0 3313 3215 1842 171 0 17 chr5 66940153 66940452 -132689698 + AluJo SINE Alu 1 294 -18 378 233 0 0 chr5 66940720 66940793 -132689357 + FLAM_A SINE Alu 37 109 -24 262 315 0 0 chr5 66940815 66940829 -132689321 + (CATA)n Simple_repeat Simple_repeat 3 16 -59 204 40 0 0 chr5 66940829 66940854 -132689296 + (TG)n Simple_repeat Simple_repeat 2 26 0 262 315 0 0 chr5 66940854 66940912 -132689238 + (CATA)n Simple_repeat Simple_repeat 15 75 0 1891 147 28 14 chr5 66942132 66942268 -132687882 + AluJo SINE Alu 1 134 -178 2024 162 0 0 chr5 66942268 66942570 -132687580 + AluJb SINE Alu 1 302 -10 1891 147 28 14 chr5 66942570 66942719 -132687431 + AluJo SINE Alu 134 290 -22 710 253 116 62 chr5 66942768 66943009 -132687141 + MIR SINE MIR 7 260 -2 1601 165 107 0 chr5 66943075 66943347 -132686803 + AluSx SINE Alu 3 303 -9 263 266 152 28 chr5 66943406 66943585 -132686565 + MIR SINE MIR 5 206 -54 2440 113 36 0 chr5 66943910 66944272 -132685878 - THE1C LTR MaLR 0 375 1 2030 125 27 14 chr5 66944727 66944854 -132685296 + AluSx SINE Alu 3 127 -185 1989 161 0 0 chr5 66944854 66945153 -132684997 + AluSx SINE Alu 1 299 -13 2030 125 27 14 chr5 66945153 66945320 -132684830 + AluSx SINE Alu 127 301 -11 326 242 8 17 chr5 66946605 66946725 -132683425 - MER20B DNA MER1_type -1 782 664 258 203 0 0 chr5 66946849 66946908 -132683242 + MER116 DNA Mariner 7 65 -15 1857 148 60 0 chr5 66946944 66947228 -132682922 + AluJb SINE Alu 1 301 -11 648 264 19 5 chr5 66947334 66947546 -132682604 - L1MD3 LINE L1 -9 7986 7772 883 270 93 58 chr5 66947624 66947907 -132682243 - MER20B DNA MER1_type -211 572 261 1874 155 21 0 chr5 66947907 66948198 -132681952 + AluJb SINE Alu 1 297 -15 883 270 93 58 chr5 66948198 66948428 -132681722 - MER20B DNA MER1_type -522 261 41 1449 165 0 107 chr5 66948649 66948976 -132681174 + AluJb SINE Alu 1 292 -10 2151 129 0 0 chr5 66948983 66949285 -132680865 + AluSx SINE Alu 1 302 -10 372 302 13 54 chr5 66951108 66951257 -132678893 + MIR SINE MIR 77 219 -43 515 239 77 26 chr5 66951724 66951879 -132678271 - MIR SINE MIR -13 249 87 26 30 0 0 chr5 66952408 66952441 -132677709 + AT_rich Low_complexity Low_complexity 1 33 0 2026 158 0 3 chr5 66952456 66952760 -132677390 - AluJb SINE Alu -9 303 1 21 71 0 0 chr5 66952900 66952942 -132677208 + AT_rich Low_complexity Low_complexity 1 42 0 287 317 85 0 chr5 66953066 66953148 -132677002 - L2 LINE L2 -1 3271 3183 2025 75 24 0 chr5 66953973 66954225 -132675925 + AluY SINE Alu 1 258 -53 1922 144 0 28 chr5 66954243 66954572 -132675578 - AluJb SINE Alu 0 321 1 4666 200 70 50 chr5 66955643 66957490 -132672660 - MER52A LTR ERV1 0 1755 1 501 208 243 29 chr5 66957754 66957927 -132672223 + MIR SINE MIR 1 210 -52 1197 145 13 18 chr5 66957938 66958111 -132672039 + Tigger1 DNA MER2_type 4 177 -2241 1785 166 17 14 chr5 66958111 66958406 -132671744 - AluSx SINE Alu -14 298 3 1197 145 13 18 chr5 66958406 66958459 -132671691 + Tigger1 DNA MER2_type 177 229 -2189 13542 114 19 45 chr5 66958500 66960470 -132669680 + Tigger1 DNA MER2_type 94 2113 -305 2222 128 0 0 chr5 66960470 66960782 -132669368 + AluSx SINE Alu 1 312 0 13542 114 19 45 chr5 66960782 66961014 -132669136 + Tigger1 DNA MER2_type 2113 2233 -185 2344 91 3 0 chr5 66961014 66961310 -132668840 - AluSx SINE Alu -10 302 6 13542 114 19 45 chr5 66961310 66961492 -132668658 + Tigger1 DNA MER2_type 2233 2418 0 183 233 47 0 chr5 66961493 66961536 -132668614 + MIR SINE MIR 218 262 0 821 68 0 0 chr5 66964140 66964257 -132665893 - L1MA2 LINE L1 -106 6198 6082 1931 150 7 3 chr5 66964272 66964565 -132665585 + AluJb SINE Alu 1 294 -18 399 70 0 0 chr5 66964897 66964954 -132665196 - L1MA2 LINE L1 -166 6138 6082 545 103 13 0 chr5 66964969 66965047 -132665103 + AluJ/FLAM SINE Alu 1 79 -233 2028 122 3 17 chr5 66965109 66965403 -132664747 + AluSx SINE Alu 1 290 -22 1642 203 7 10 chr5 66967218 66967514 -132662636 + AluJo SINE Alu 1 295 -17 262 222 74 22 chr5 66968496 66968631 -132661519 + L1ME4a LINE L1 5978 6119 -2 669 110 9 18 chr5 66969682 66969775 -132660375 + AluSp/q SINE Alu 201 294 -19 2322 104 17 6 chr5 66969775 66970120 -132660030 + L1PA13 LINE L1 5815 6163 0 669 110 9 18 chr5 66970120 66970135 -132660015 + AluSp/q SINE Alu 294 308 -5 278 284 12 25 chr5 66971458 66971539 -132658611 + L3b LINE CR1 1406 1485 -98 241 160 60 0 chr5 66972812 66972862 -132657288 + GA-rich Low_complexity Low_complexity 2 54 0 387 180 324 0 chr5 66972950 66973061 -132657089 - MIR SINE MIR -96 166 20 291 159 34 45 chr5 66973887 66973975 -132656175 + L1MC5 LINE L1 7831 7917 -44 2054 151 3 3 chr5 66974333 66974644 -132655506 + AluSx SINE Alu 1 311 -1 385 325 0 0 chr5 66974777 66974891 -132655259 + LTR37B LTR ERV1 6 119 -349 1105 166 94 65 chr5 66974899 66975207 -132654943 + MER33 DNA MER1_type 6 322 -2 303 189 95 0 chr5 66975222 66975296 -132654854 + LTR37B LTR ERV1 119 199 -269 22 0 0 0 chr5 66977705 66977727 -132652423 + AT_rich Low_complexity Low_complexity 1 22 0 2080 106 18 0 chr5 66978398 66978681 -132651469 + AluSx SINE Alu 3 290 -22 593 217 47 8 chr5 66979538 66979667 -132650483 - MLT1A2 LTR MaLR -12 362 229 746 194 31 37 chr5 66979785 66979976 -132650174 - MLT1A2 LTR MaLR -183 191 2 1944 152 14 3 chr5 66980203 66980500 -132649650 + AluJo SINE Alu 9 308 -4 924 308 138 54 chr5 66981051 66981307 -132648843 + L3 LINE CR1 438 671 -906 2033 128 3 7 chr5 66981307 66981603 -132648547 + AluSx SINE Alu 1 295 -17 924 308 138 54 chr5 66981603 66982287 -132647863 + L3 LINE CR1 671 1457 -120 210 71 0 0 chr5 66983037 66983065 -132647085 + (A)n Simple_repeat Simple_repeat 1 28 0 329 288 144 8 chr5 66983330 66983455 -132646695 - L2 LINE L2 -4 3268 3127 819 168 0 0 chr5 66983942 66984067 -132646083 - FLAM_C SINE Alu -8 125 1 1015 166 0 18 chr5 66985436 66985605 -132644545 + FRAM SINE Alu 1 165 -11 1683 181 0 7 chr5 66985610 66985898 -132644252 + AluJb SINE Alu 1 286 -26 324 0 0 0 chr5 66985898 66985934 -132644216 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 1943 160 6 10 chr5 66986811 66987124 -132643026 + AluJb SINE Alu 1 312 0 1611 154 91 3 chr5 66987355 66987641 -132642509 + AluJb SINE Alu 1 311 -1 472 295 116 20 chr5 66988840 66989206 -132640944 + L1ME3A LINE L1 5587 5993 -169 1914 132 37 3 chr5 66989361 66989657 -132640493 + AluSq SINE Alu 1 306 -7 2207 107 40 0 chr5 66990144 66990444 -132639706 - AluSx SINE Alu 0 312 1 438 299 26 26 chr5 66990484 66990638 -132639512 + MLT1L LTR MaLR 163 316 -299 271 258 47 62 chr5 66990699 66990827 -132639323 + MLT1J LTR MaLR 386 511 0 834 203 0 70 chr5 66991022 66991073 -132639077 - AluJo/FRAM SINE Alu 0 312 259 1930 93 4 7 chr5 66991073 66991342 -132638808 - AluSq SINE Alu -2 311 44 834 203 0 70 chr5 66991342 66991477 -132638673 - AluJo/FRAM SINE Alu -53 259 139 240 302 0 58 chr5 66991766 66991852 -132638298 + MIR SINE MIR 154 234 -28 180 209 23 0 chr5 66991883 66991926 -132638224 - MIR SINE MIR -28 234 191 236 200 67 27 chr5 66992056 66992131 -132638019 - HAL1b LINE L1 -13 1335 1258 263 282 0 12 chr5 66992183 66992268 -132637882 - L1MC4 LINE L1 -1345 6697 6614 243 265 10 51 chr5 66992189 66992287 -132637863 + L1MC4 LINE L1 6614 6707 -1335 * 21 0 0 0 chr5 66992502 66992523 -132637627 + AT_rich Low_complexity Low_complexity 1 21 0 1538 153 22 83 chr5 66992650 66992837 -132637313 - AluJo SINE Alu -17 295 98 2726 122 49 2 chr5 66992837 66993247 -132636903 + L1PA15 LINE L1 5729 6157 -8 2102 104 7 27 chr5 66993248 66993547 -132636603 + AluSx SINE Alu 1 293 -19 1538 153 22 83 chr5 66993547 66993671 -132636479 - AluJo SINE Alu -213 99 1 1199 178 32 0 chr5 66993683 66993902 -132636248 - L1MB2 LINE L1 -2 6169 5944 198 143 268 54 chr5 66993933 66993989 -132636161 + L2 LINE L2 3205 3272 0 317 113 38 19 chr5 66994069 66994122 -132636028 - MSTB LTR MaLR 0 426 373 288 333 0 22 chr5 66994132 66994222 -132635928 - MIR SINE MIR -155 107 20 1418 205 3 77 chr5 66994501 66994877 -132635273 + MLT2C1 LTR ERVL 1 348 -49 291 71 0 0 chr5 66994890 66994932 -132635218 + (TG)n Simple_repeat Simple_repeat 1 42 0 1424 114 180 0 chr5 66995769 66996024 -132634126 - AluJo SINE Alu -11 301 1 212 337 119 0 chr5 66996303 66996404 -132633746 + MIR3 SINE MIR 85 197 -11 1337 182 23 58 chr5 66996614 66996922 -132633228 - AluJb SINE Alu -13 299 3 968 115 0 36 chr5 66997734 66997765 -132632385 + FLAM_C SINE Alu 1 32 -280 4472 89 5 0 chr5 66997765 66998316 -132631834 - MER41A LTR ERV1 0 554 1 968 115 0 36 chr5 66998316 66998423 -132631727 + FLAM_C SINE Alu 32 134 -178 280 146 0 0 chr5 66998438 66998479 -132631671 + AluJ/FRAM SINE Alu 227 267 -35 402 57 0 0 chr5 66998491 66998544 -132631606 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 1753 139 46 26 chr5 66998565 66998867 -132631283 - AluJb SINE Alu -4 308 1 2532 149 81 25 chr5 66998876 66999242 -132630908 - L1MB3 LINE L1 0 6183 5839 360 0 0 0 chr5 66999242 66999282 -132630868 + (CA)n Simple_repeat Simple_repeat 2 41 0 2093 141 3 0 chr5 66999286 66999592 -132630558 - AluSp SINE Alu -6 307 1 2532 149 81 25 chr5 66999592 66999742 -132630408 - L1MB3 LINE L1 -346 5837 5633 1899 201 68 23 chr5 66999742 67000139 -132630011 - MLT2B1 LTR ERVL -105 415 1 1411 171 50 53 chr5 67000139 67000479 -132629671 - L1MB3 LINE L1 -565 5618 5280 * 38303 89 8 12 chr5 67000448 67006624 -132623526 - L1PA6 LINE L1 -2 6152 12 513 159 33 45 chr5 67006635 67006757 -132623393 - L1M LINE L1 -823 5323 5215 2129 176 55 5 chr5 67006782 67007162 -132622988 + MSTB LTR MaLR 1 399 -27 1389 195 25 63 chr5 67007162 67007570 -132622580 - AluJo SINE Alu 0 400 5 609 212 73 7 chr5 67007647 67007784 -132622366 + MLT1B LTR MaLR 26 171 -219 2174 105 3 7 chr5 67007791 67008085 -132622065 + AluSx SINE Alu 1 293 -19 1991 148 10 13 chr5 67008095 67008406 -132621744 + AluJo SINE Alu 3 312 0 258 56 0 0 chr5 67008442 67008478 -132621672 + (TCTG)n Simple_repeat Simple_repeat 2 37 0 634 175 0 0 chr5 67008654 67008751 -132621399 + AluSg/x SINE Alu 201 297 -15 830 118 0 7 chr5 67008758 67008893 -132621257 + (GGAGA)n Simple_repeat Simple_repeat 5 138 0 2894 116 15 22 chr5 67009198 67009657 -132620493 - L1MA4 LINE L1 0 6300 5845 578 188 161 0 chr5 67010793 67010905 -132619245 - FLAM_A SINE Alu -3 130 1 281 243 0 0 chr5 67010909 67010979 -132619171 - L1ME LINE L1 -556 5606 5537 1511 195 33 13 chr5 67011005 67011312 -132618838 - LTR16A LTR ERVL -16 434 122 851 254 89 2 chr5 67011314 67011724 -132618426 - L1ME LINE L1 -1299 4847 4243 818 159 0 15 chr5 67012178 67012310 -132617840 + FLAM_C SINE Alu 1 130 -13 4379 127 10 39 chr5 67013177 67013308 -132616842 - Tigger1 DNA MER2_type 0 2418 2285 2264 121 0 6 chr5 67013308 67013622 -132616528 - AluSx SINE Alu 0 312 1 4379 127 10 39 chr5 67013622 67014096 -132616054 - Tigger1 DNA MER2_type -133 2285 1835 1653 84 200 36 chr5 67014096 67014346 -132615804 + AluSg SINE Alu 1 291 -9 4379 127 10 39 chr5 67014346 67014457 -132615693 - Tigger1 DNA MER2_type -583 1835 1722 2165 101 0 0 chr5 67014484 67014760 -132615390 + AluSx SINE Alu 11 286 -26 225 0 0 0 chr5 67014763 67014788 -132615362 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 2488 68 0 0 chr5 67014788 67015081 -132615069 + AluSg SINE Alu 1 293 -17 800 200 177 23 chr5 67015267 67015560 -132614590 + L1ME3A LINE L1 5692 6021 -149 1156 186 43 5 chr5 67016240 67016450 -132613700 + MER20 DNA MER1_type 1 218 -1 1019 159 49 0 chr5 67016689 67016852 -132613298 - FRAM SINE Alu -6 170 1 216 0 0 0 chr5 67017019 67017043 -132613107 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 287 224 82 0 chr5 67017445 67017530 -132612620 - MLT1A2 LTR MaLR -281 93 2 * 912 245 83 38 chr5 67017530 67017815 -132612335 - MLT1G LTR MaLR -282 308 10 1903 118 14 7 chr5 67017826 67018106 -132612044 + L1MA1 LINE L1 6015 6296 -6 285 328 113 0 chr5 67018251 67018384 -132611766 - MIR SINE MIR -67 195 47 259 300 82 55 chr5 67018383 67018493 -132611657 + L2 LINE L2 3151 3263 -9 * 853 280 88 31 chr5 67018545 67019530 -132610620 + L1MC4 LINE L1 4915 5984 -180 911 163 0 0 chr5 67020294 67020435 -132609715 + AluJo SINE Alu 1 141 -171 21 36 0 0 chr5 67020471 67020499 -132609651 + AT_rich Low_complexity Low_complexity 1 28 0 2027 161 0 0 chr5 67021207 67021595 -132608555 - AluJb SINE Alu 0 388 1 2151 116 33 0 chr5 67021615 67021916 -132608234 - AluSx SINE Alu -1 311 1 1087 325 109 49 chr5 67022427 67023392 -132606758 + L2 LINE L2 2175 3185 -87 2489 21 42 0 chr5 67023398 67023684 -132606466 - AluY SINE Alu -13 298 1 188 263 35 0 chr5 67023737 67023794 -132606356 + L2 LINE L2 3255 3313 0 28 29 0 0 chr5 67024016 67024051 -132606099 + AT_rich Low_complexity Low_complexity 1 35 0 1586 139 19 8 chr5 67024054 67024313 -132605837 - AluSx SINE Alu -35 277 16 287 277 79 0 chr5 67024527 67024628 -132605522 - L1ME4a LINE L1 -58 6063 5955 2322 104 3 0 chr5 67024698 67025007 -132605143 - AluSp SINE Alu -3 310 1 1277 219 37 25 chr5 67025016 67025341 -132604809 - L1ME4a LINE L1 -303 5818 5490 1924 158 3 0 chr5 67025946 67026238 -132603912 - AluSx SINE Alu -18 294 2 182 341 8 56 chr5 67026305 67026431 -132603719 + MIR SINE MIR 62 181 -81 25 0 0 0 chr5 67026473 67026498 -132603652 + AT_rich Low_complexity Low_complexity 1 25 0 380 111 16 0 chr5 67026946 67027009 -132603141 + L1MB2 LINE L1 6078 6141 -30 1573 158 14 24 chr5 67027048 67027340 -132602810 - AluJo SINE Alu -8 304 16 338 74 19 0 chr5 67027369 67027423 -132602727 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 2057 133 0 0 chr5 67027424 67027710 -132602440 - AluSx SINE Alu -5 307 22 2328 124 5 24 chr5 67028106 67028476 -132601674 - L1MB2 LINE L1 -3 6168 5806 2374 204 30 56 chr5 67028628 67029201 -132600949 - MER92B LTR ERV1 -1 635 77 1963 136 7 0 chr5 67029201 67029505 -132600645 + AluSx SINE Alu 1 306 0 2374 204 30 56 chr5 67029505 67029559 -132600591 - MER92B LTR ERV1 -559 77 23 320 318 33 26 chr5 67029638 67029789 -132600361 + MLT1K LTR MaLR 111 262 -326 328 167 39 39 chr5 67029821 67029899 -132600251 + MLT1K LTR MaLR 456 533 -55 1530 165 0 8 chr5 67030206 67030455 -132599695 + AluJo SINE Alu 1 247 -65 21 0 0 0 chr5 67030561 67030582 -132599568 + AT_rich Low_complexity Low_complexity 1 21 0 1283 174 100 12 chr5 67030582 67030721 -132599429 - AluJo SINE Alu -30 282 157 180 0 0 0 chr5 67030721 67030741 -132599409 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1283 174 100 12 chr5 67030741 67030860 -132599290 - AluJo SINE Alu -155 157 1 398 252 138 8 chr5 67031190 67031313 -132598837 - L2 LINE L2 -8 3305 3167 1403 157 18 0 chr5 67031416 67031633 -132598517 + AluJb SINE Alu 84 304 -8 453 132 175 9 chr5 67031662 67031776 -132598374 + L1ME4a LINE L1 5985 6117 -4 2325 110 0 3 chr5 67032526 67032836 -132597314 - AluSq SINE Alu -4 309 1 2246 164 51 84 chr5 67032953 67033546 -132596604 - L1ME3 LINE L1 -2 6160 5588 357 277 212 18 chr5 67033554 67033832 -132596318 - L1MC4a LINE L1 -1659 6149 5818 2280 153 3 12 chr5 67033840 67034180 -132595970 - MER1B DNA MER1_type 0 337 1 630 263 93 19 chr5 67034272 67034531 -132595619 - L1ME3 LINE L1 -2277 5531 5254 1834 137 0 60 chr5 67034575 67034889 -132595261 - AluJo SINE Alu -17 295 1 189 245 245 0 chr5 67034951 67035004 -132595146 - L2 LINE L2 -8 3264 3199 503 308 25 0 chr5 67035125 67035284 -132594866 + L2 LINE L2 2327 2489 -825 224 244 263 35 chr5 67035315 67035631 -132594519 - L2 LINE L2 -637 2677 2290 276 247 90 22 chr5 67036472 67036561 -132593589 + MIR3 SINE MIR 2 96 -112 449 278 59 41 chr5 67036630 67036799 -132593351 - MLT1K LTR MaLR -410 178 7 723 135 9 0 chr5 67037351 67037462 -132592688 + AluJb SINE Alu 2 113 -199 276 35 69 121 chr5 67037462 67037520 -132592630 - MLT2A1 LTR ERVL 0 453 399 246 75 0 57 chr5 67037520 67037573 -132592577 + (TA)n Simple_repeat Simple_repeat 1 50 0 2768 88 46 5 chr5 67037576 67037964 -132592186 - MLT2A1 LTR ERVL -40 404 1 1216 165 0 0 chr5 67037967 67038155 -132591995 + AluJb SINE Alu 112 299 -13 392 296 14 35 chr5 67038360 67038502 -132591648 + MIR SINE MIR 124 262 0 209 256 167 0 chr5 67038502 67038580 -132591570 + MIR SINE MIR 123 213 -49 1811 138 14 3 chr5 67038583 67038866 -132591284 + AluSx SINE Alu 1 286 -26 21 0 0 0 chr5 67038929 67038950 -132591200 + AT_rich Low_complexity Low_complexity 1 21 0 264 304 39 0 chr5 67039161 67039263 -132590887 + MIR SINE MIR 59 164 -98 2340 91 3 0 chr5 67039433 67039730 -132590420 + AluSp SINE Alu 1 298 -15 614 273 74 9 chr5 67039770 67039986 -132590164 - MIR SINE MIR -28 234 5 1803 136 10 52 chr5 67040080 67040254 -132589896 - AluSx SINE Alu -17 295 138 2089 107 3 10 chr5 67040254 67040545 -132589605 - AluSc SINE Alu -20 289 1 1803 136 10 52 chr5 67040545 67040678 -132589472 - AluSx SINE Alu -174 138 1 2169 124 33 47 chr5 67041092 67041455 -132588695 - THE1B LTR MaLR 0 364 7 574 206 0 0 chr5 67041817 67041909 -132588241 + FLAM_C SINE Alu 26 117 -26 614 194 0 0 chr5 67041957 67042055 -132588095 + FRAM SINE Alu 1 92 -84 1121 12 49 0 chr5 67042073 67042235 -132587915 + (TCTA)n Simple_repeat Simple_repeat 4 173 0 433 209 23 0 chr5 67042284 67042370 -132587780 - MER63 DNA MER1_type -309 753 40 912 194 18 6 chr5 67043407 67043572 -132586578 + MER5B DNA MER1_type 1 167 -11 234 0 0 0 chr5 67043595 67043621 -132586529 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 190 0 35 35 chr5 67043622 67043651 -132586499 + MER5B DNA MER1_type 150 178 0 493 335 63 0 chr5 67043886 67044107 -132586043 + L1ME LINE L1 5483 5717 -404 24 53 0 0 chr5 67044292 67044330 -132585820 + AT_rich Low_complexity Low_complexity 1 38 0 1822 135 14 14 chr5 67044336 67044633 -132585517 + AluJb SINE Alu 1 297 -15 445 234 54 0 chr5 67045210 67045321 -132584829 + MIR SINE MIR 120 236 -26 1902 127 14 41 chr5 67045532 67045862 -132584288 - AluSx SINE Alu 0 322 1 1336 164 27 0 chr5 67045936 67046161 -132583989 + Tigger1 DNA MER2_type 1 231 -2187 1427 193 21 14 chr5 67046171 67046451 -132583699 - AluJo SINE Alu -30 282 1 482 82 0 14 chr5 67046462 67046535 -132583615 + (TCC)n Simple_repeat Simple_repeat 2 73 0 538 228 44 0 chr5 67046535 67046649 -132583501 - FLAM_C SINE Alu -8 135 17 10716 104 19 42 chr5 67046649 67048160 -132581990 + Tigger1 DNA MER2_type 220 1692 -726 2308 99 0 0 chr5 67048160 67048454 -132581696 - AluSx SINE Alu -8 304 11 10716 104 19 42 chr5 67048454 67048591 -132581559 + Tigger1 DNA MER2_type 1692 1831 -587 1439 82 0 46 chr5 67048592 67048786 -132581364 - AluSg/x SINE Alu -19 291 107 429 91 0 0 chr5 67048786 67048841 -132581309 - Alu SINE Alu -256 56 2 3665 137 12 28 chr5 67048843 67049316 -132580834 + Tigger1 DNA MER2_type 1824 2286 -132 2264 121 0 6 chr5 67049316 67049630 -132580520 + AluSx SINE Alu 1 312 0 3665 137 12 28 chr5 67049630 67049761 -132580389 + Tigger1 DNA MER2_type 2286 2418 0 818 159 0 15 chr5 67050628 67050760 -132579390 - FLAM_C SINE Alu -13 130 1 851 254 89 2 chr5 67051214 67051624 -132578526 + L1ME LINE L1 4243 4847 -1299 1571 197 33 7 chr5 67051626 67051931 -132578219 + LTR16A LTR ERVL 122 434 -16 294 254 8 104 chr5 67051957 67052031 -132578119 + L1ME LINE L1 5537 5594 -568 578 188 161 0 chr5 67052031 67052143 -132578007 + FLAM_A SINE Alu 1 130 -3 294 254 8 104 chr5 67052143 67052202 -132577948 + L1ME LINE L1 5594 5657 -505 2912 113 18 22 chr5 67053280 67053738 -132576412 + L1MA4 LINE L1 5845 6300 0 875 114 0 7 chr5 67054041 67054181 -132575969 + (TCTCC)n Simple_repeat Simple_repeat 5 143 0 2067 148 0 3 chr5 67054188 67054486 -132575664 - AluSx SINE Alu -15 297 1 315 0 0 0 chr5 67054812 67054847 -132575303 + (TG)n Simple_repeat Simple_repeat 2 36 0 2180 75 44 0 chr5 67054985 67055280 -132574870 - AluY SINE Alu -1 310 3 627 48 0 0 chr5 67055342 67055425 -132574725 + (TC)n Simple_repeat Simple_repeat 2 84 0 180 286 0 0 chr5 67055434 67055476 -132574674 + L2 LINE L2 3213 3254 -18 1407 250 121 12 chr5 67056063 67056467 -132573683 - LTR16A LTR ERVL -2 448 1 1173 312 50 54 chr5 67057166 67057370 -132572780 - MERVL LTR ERVL -805 4680 4477 2085 96 4 7 chr5 67057370 67057693 -132572457 + AluSg SINE Alu 1 322 0 1173 312 50 54 chr5 67057693 67058244 -132571906 - MERVL LTR ERVL -1008 4477 3927 818 107 0 0 chr5 67058715 67058818 -132571332 + FLAM_C SINE Alu 11 113 -30 551 247 132 53 chr5 67059817 67060505 -132569645 + L1MC5 LINE L1 7019 7633 -328 1620 181 16 35 chr5 67060505 67060815 -132569335 - AluJo SINE Alu -8 304 1 551 247 132 53 chr5 67060815 67060971 -132569179 + L1MC5 LINE L1 7633 7775 -186 1886 142 0 79 chr5 67061349 67061679 -132568471 - AluJo SINE Alu -8 304 1 1660 158 17 34 chr5 67061696 67061994 -132568156 - AluJb SINE Alu -19 293 1 379 259 54 54 chr5 67062321 67062506 -132567644 + MIR SINE MIR 31 215 -47 232 304 205 22 chr5 67063226 67063450 -132566700 + L2 LINE L2 2712 2976 -338 1561 168 62 7 chr5 67063452 67063744 -132566406 - AluJb SINE Alu -1 311 4 21 0 0 0 chr5 67063746 67063767 -132566383 + AT_rich Low_complexity Low_complexity 1 21 0 482 267 133 25 chr5 67063773 67064013 -132566137 + L2 LINE L2 2982 3247 -66 1908 130 4 4 chr5 67064255 67064532 -132565618 + AluSx SINE Alu 1 277 -35 34 0 0 0 chr5 67064535 67064569 -132565581 + AT_rich Low_complexity Low_complexity 1 34 0 188 263 35 0 chr5 67064792 67064849 -132565301 - L2 LINE L2 0 3313 3255 2489 21 42 0 chr5 67064902 67065188 -132564962 + AluY SINE Alu 1 298 -13 1114 325 109 48 chr5 67065194 67066158 -132563992 - L2 LINE L2 -87 3185 2175 2170 113 33 0 chr5 67066670 67066970 -132563180 + AluSx SINE Alu 1 310 -2 1821 181 16 0 chr5 67066990 67067369 -132562781 + AluJb SINE Alu 1 384 0 351 239 144 36 chr5 67067886 67068053 -132562097 - L1ME4a LINE L1 -2 6119 5935 232 300 0 0 chr5 67068053 67068123 -132562027 + HsTC2 DNA Tc2 16 85 -1813 559 52 41 10 chr5 67068123 67068220 -132561930 + (TTC)n Simple_repeat Simple_repeat 1 100 0 2056 121 31 0 chr5 67068248 67068538 -132561612 - AluSx SINE Alu -7 305 7 442 317 117 42 chr5 67069110 67069750 -132560400 - L2 LINE L2 -25 3247 2538 2798 128 39 5 chr5 67070128 67070542 -132559608 - MSTA LTR MaLR 0 428 1 263 301 0 24 chr5 67071215 67071298 -132558852 + MLT1K LTR MaLR 471 551 -37 253 348 48 26 chr5 67071332 67071559 -132558591 - L3 LINE CR1 -196 1381 1150 208 354 177 0 chr5 67071574 67071670 -132558480 - L3 LINE CR1 -399 1178 1066 2397 202 62 17 chr5 67071826 67072315 -132557835 + MLT2B3 LTR ERVL 2 518 -36 511 53 27 0 chr5 67072315 67072390 -132557760 + (TCTA)n Simple_repeat Simple_repeat 3 79 0 2397 202 62 17 chr5 67072390 67072429 -132557721 + MLT2B3 LTR ERVL 518 554 0 2066 139 7 0 chr5 67072550 67072853 -132557297 + AluSx SINE Alu 1 305 -7 561 293 40 18 chr5 67073043 67073265 -132556885 - L3 LINE CR1 -571 1006 780 243 157 137 0 chr5 67073439 67073490 -132556660 - L2 LINE L2 0 3272 3215 2561 81 0 0 chr5 67073646 67073955 -132556195 + AluSq SINE Alu 1 309 -4 1982 115 3 37 chr5 67074000 67074296 -132555854 + AluSx SINE Alu 1 286 -26 225 0 0 0 chr5 67074299 67074324 -132555826 + (TTAA)n Simple_repeat Simple_repeat 3 27 0 2488 68 0 0 chr5 67074324 67074617 -132555533 + AluSg SINE Alu 1 293 -17 929 189 174 15 chr5 67074825 67075095 -132555055 + L1ME3A LINE L1 5709 6021 -149 1171 181 43 5 chr5 67075776 67075986 -132554164 + MER20 DNA MER1_type 1 218 -1 1042 158 49 0 chr5 67076225 67076389 -132553761 - FRAM SINE Alu -5 171 1 180 0 0 0 chr5 67076556 67076576 -132553574 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2197 110 0 10 chr5 67077623 67077939 -132552211 - AluSc SINE Alu 0 309 1 540 258 102 11 chr5 67078113 67078299 -132551851 + MIR SINE MIR 7 209 -53 1923 151 3 3 chr5 67078371 67078683 -132551467 + AluJb SINE Alu 1 312 0 25 0 0 0 chr5 67078745 67078770 -132551380 + AT_rich Low_complexity Low_complexity 1 25 0 312 137 0 0 chr5 67078895 67078946 -132551204 + (CA)n Simple_repeat Simple_repeat 2 52 0 2291 88 3 0 chr5 67078946 67079243 -132550907 - AluYa5 SINE Alu -13 298 1 842 150 22 17 chr5 67079277 67079457 -132550693 - L1MB4 LINE L1 -1 6179 5999 1583 92 0 0 chr5 67079634 67079861 -132550289 + L1PB1 LINE L1 5923 6149 -2 188 86 29 0 chr5 67080537 67080572 -132549578 + (TA)n Simple_repeat Simple_repeat 1 36 0 410 218 0 0 chr5 67080593 67080680 -132549470 + AluJb SINE Alu 212 298 -14 1198 235 10 23 chr5 67080846 67081152 -132548998 - MLT1G LTR MaLR -286 304 3 228 352 0 0 chr5 67081352 67081423 -132548727 + MIR SINE MIR 188 258 -4 1486 201 0 11 chr5 67081637 67081905 -132548245 - AluJo SINE Alu -5 307 43 21 57 0 0 chr5 67082348 67082383 -132547767 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 67082804 67082826 -132547324 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 67083959 67083979 -132546171 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 233 237 13 92 chr5 67084099 67084175 -132545975 + MIR SINE MIR 40 109 -153 22 0 0 0 chr5 67084526 67084548 -132545602 + AT_rich Low_complexity Low_complexity 1 22 0 1876 151 3 38 chr5 67084816 67085135 -132545015 - AluSq SINE Alu -5 308 1 2051 126 0 17 chr5 67085162 67085464 -132544686 + AluSx SINE Alu 2 298 -14 456 254 131 26 chr5 67086643 67086812 -132543338 + MIR3 SINE MIR 2 183 -25 23 0 0 0 chr5 67086986 67087009 -132543141 + AT_rich Low_complexity Low_complexity 1 23 0 380 244 39 77 chr5 67087228 67087285 -132542865 - MIR SINE MIR -52 210 152 2645 51 0 0 chr5 67087285 67087596 -132542554 + AluY SINE Alu 1 311 0 380 244 39 77 chr5 67087596 67087694 -132542456 - MIR SINE MIR -110 152 61 285 51 0 0 chr5 67087706 67087870 -132542280 - AluSp/q SINE Alu 0 419 256 769 192 0 0 chr5 67088175 67088300 -132541850 + FRAM SINE Alu 1 124 -52 2377 56 10 10 chr5 67088618 67088923 -132541227 - AluY SINE Alu -6 305 1 23 54 0 0 chr5 67089095 67089132 -132541018 + AT_rich Low_complexity Low_complexity 1 37 0 232 284 0 15 chr5 67089397 67089464 -132540686 - MER94 DNA DNA -5 129 64 1770 174 3 3 chr5 67089480 67089762 -132540388 - AluJb SINE Alu -26 286 5 366 216 14 0 chr5 67089769 67089843 -132540307 - MER94 DNA DNA -59 75 1 778 182 0 14 chr5 67089914 67090057 -132540093 + FAM SINE Alu 25 165 -20 523 324 83 29 chr5 67090069 67090310 -132539840 - MIR SINE MIR 0 262 9 21 0 0 0 chr5 67090487 67090508 -132539642 + AT_rich Low_complexity Low_complexity 1 21 0 4157 134 42 1 chr5 67091631 67092346 -132537804 + Tigger2 DNA MER2_type 1 744 -1974 1073 153 91 21 chr5 67092408 67092649 -132537501 + Tigger2 DNA MER2_type 2461 2718 0 868 131 8 0 chr5 67092689 67092811 -132537339 - FLAM_C SINE Alu -20 123 1 180 0 0 0 chr5 67093932 67093952 -132536198 + (A)n Simple_repeat Simple_repeat 1 20 0 30 89 0 0 chr5 67094895 67094974 -132535176 + GC_rich Low_complexity Low_complexity 1 79 0 29 28 0 0 chr5 67095023 67095059 -132535091 + GC_rich Low_complexity Low_complexity 1 36 0 224 311 0 14 chr5 67095138 67095212 -132534938 + C-rich Low_complexity Low_complexity 4 76 0 210 105 0 0 chr5 67095432 67095470 -132534680 + (CGGA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr5 67096614 67096637 -132533513 + AT_rich Low_complexity Low_complexity 1 23 0 2304 119 3 0 chr5 67098957 67099267 -132530883 - AluSx SINE Alu -1 311 1 2248 78 0 10 chr5 67099639 67099935 -132530215 - AluY SINE Alu -18 293 1 1160 164 80 8 chr5 67100871 67101133 -132529017 - Charlie1 DNA MER1_type -145 2616 2336 2364 87 6 3 chr5 67101134 67101446 -132528704 - AluSp SINE Alu 0 313 1 21 0 0 0 chr5 67101944 67101965 -132528185 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 67102122 67102159 -132527991 + AT_rich Low_complexity Low_complexity 1 37 0 483 287 110 31 chr5 67102602 67102856 -132527294 - L2 LINE L2 -4 3309 3036 24 32 0 0 chr5 67103285 67103316 -132526834 + AT_rich Low_complexity Low_complexity 1 31 0 774 204 105 11 chr5 67104000 67104191 -132525959 - MER6B DNA MER2_type -1 209 1 288 281 141 8 chr5 67104593 67104714 -132525436 - MIR SINE MIR -77 185 49 1832 176 39 0 chr5 67104926 67105256 -132524894 - MER2 DNA MER2_type -1 343 1 3159 122 80 42 chr5 67106092 67106733 -132523417 - L1MA8 LINE L1 -108 6183 5519 25 0 0 0 chr5 67106815 67106840 -132523310 + AT_rich Low_complexity Low_complexity 1 25 0 453 81 0 0 chr5 67107019 67107081 -132523069 + (TCCTG)n Simple_repeat Simple_repeat 2 63 0 2043 102 50 3 chr5 67107081 67107359 -132522791 - AluSc SINE Alu -18 291 1 2302 88 7 13 chr5 67107504 67107811 -132522339 - AluSx SINE Alu -7 305 1 1659 204 0 26 chr5 67108032 67108340 -132521810 - AluJb SINE Alu -12 300 1 3848 71 24 62 chr5 67111039 67111782 -132518368 - SVA Other Other -520 866 256 261 0 0 0 chr5 67111793 67111822 -132518328 + (GGGAGA)n Simple_repeat Simple_repeat 1 29 0 1657 170 21 7 chr5 67112983 67113265 -132516885 + AluJb SINE Alu 5 290 -22 310 231 19 19 chr5 67113462 67113566 -132516584 + L1ME2 LINE L1 951 1054 -5151 1714 258 106 23 chr5 67113575 67113970 -132516180 + L1ME2 LINE L1 1771 2132 -4083 2162 109 0 37 chr5 67113970 67114291 -132515859 + AluSx SINE Alu 3 311 -1 1714 258 106 23 chr5 67114291 67115448 -132514702 + L1ME2 LINE L1 2132 3419 -2796 334 264 5 20 chr5 67115675 67115828 -132514322 - MLT1H LTR MaLR -344 205 14 543 249 149 16 chr5 67115846 67116095 -132514055 - LTR40b LTR ERVL -1 461 180 648 240 146 11 chr5 67116433 67116708 -132513442 + L1ME2 LINE L1 5453 5764 -471 425 215 147 0 chr5 67116716 67116879 -132513271 + L1ME2 LINE L1 6037 6223 -10 276 143 0 0 chr5 67118857 67118906 -132511244 + L1MC5 LINE L1 7805 7853 -108 2101 122 7 0 chr5 67118928 67119224 -132510926 - AluSg SINE Alu -12 298 1 216 298 16 16 chr5 67119231 67119322 -132510828 + MER5B DNA MER1_type 56 133 -45 1666 260 154 44 chr5 67119459 67120187 -132509963 + L2 LINE L2 1626 2433 -881 277 222 111 26 chr5 67120505 67120622 -132509528 - MLT1L LTR MaLR -8 607 481 247 337 41 66 chr5 67120638 67120834 -132509316 - MLT1L LTR MaLR -62 553 363 1649 159 7 14 chr5 67121101 67121202 -132508948 + AluJb SINE Alu 17 117 -195 252 0 0 0 chr5 67121202 67121230 -132508920 + (CA)n Simple_repeat Simple_repeat 2 29 0 1649 159 7 14 chr5 67121230 67121404 -132508746 + AluJb SINE Alu 117 290 -22 1955 125 38 3 chr5 67121406 67121694 -132508456 + AluSx SINE Alu 3 300 -12 1680 184 3 17 chr5 67121923 67122222 -132507928 + AluJo SINE Alu 1 295 -17 1673 127 88 14 chr5 67122556 67122840 -132507310 + AluJb SINE Alu 1 305 -7 453 157 10 39 chr5 67123564 67123666 -132506484 + MER3 DNA MER1_type 111 209 0 355 228 32 73 chr5 67124087 67124210 -132505940 + MIR SINE MIR 119 236 -26 2203 68 43 7 chr5 67124221 67124501 -132505649 + AluY SINE Alu 1 290 -21 183 192 0 123 chr5 67124501 67124574 -132505576 + MIR SINE MIR 173 236 -26 1974 113 17 7 chr5 67124599 67124891 -132505259 - AluSx SINE Alu -17 295 1 942 196 29 25 chr5 67124979 67125224 -132504926 - MER96B DNA MER1_type? -171 246 1 2222 65 27 0 chr5 67125989 67126282 -132503868 - AluY SINE Alu -10 301 1 439 268 95 49 chr5 67127482 67127577 -132502573 - MER112 DNA MER1_type -6 254 165 673 179 92 6 chr5 67127577 67127750 -132502400 + MER53 DNA DNA 1 188 -1 439 268 95 49 chr5 67127750 67127897 -132502253 - MER112 DNA MER1_type -95 165 1 23 68 0 0 chr5 67128773 67128817 -132501333 + AT_rich Low_complexity Low_complexity 1 44 0 7297 147 41 25 chr5 67129018 67131248 -132498902 - L1MA8 LINE L1 -197 6094 3829 189 0 0 0 chr5 67131763 67131784 -132498366 + (CA)n Simple_repeat Simple_repeat 2 22 0 1993 106 18 4 chr5 67131793 67132067 -132498083 + AluSx SINE Alu 13 290 -22 258 56 0 0 chr5 67132067 67132103 -132498047 + (TA)n Simple_repeat Simple_repeat 2 37 0 42 20 0 0 chr5 67132352 67132401 -132497749 + AT_rich Low_complexity Low_complexity 1 49 0 1673 177 10 10 chr5 67132500 67132788 -132497362 + AluJb SINE Alu 1 288 -24 2306 101 0 0 chr5 67133018 67133314 -132496836 + AluSg SINE Alu 1 296 -14 767 77 10 0 chr5 67133393 67133497 -132496653 + FRAM SINE Alu 60 164 -12 2314 49 3 7 chr5 67133956 67134242 -132495908 - AluY SINE Alu -26 285 1 332 286 110 0 chr5 67134785 67134876 -132495274 - MIR SINE MIR -160 102 2 1882 167 3 7 chr5 67135842 67136148 -132494002 + AluJo SINE Alu 1 305 -7 347 151 23 81 chr5 67136468 67136554 -132493596 + L1MC4 LINE L1 6504 6584 -1458 470 185 0 22 chr5 67136569 67136661 -132493489 - Tigger5 DNA MER2_type 0 2323 2234 566 249 135 9 chr5 67136717 67137033 -132493117 + L1MC4 LINE L1 6619 6982 -1013 1707 200 89 75 chr5 67137100 67137673 -132492477 + L1MC4 LINE L1 7254 7838 -204 2229 80 31 3 chr5 67137673 67137959 -132492191 + AluY SINE Alu 1 294 -17 1707 200 89 75 chr5 67137959 67138026 -132492124 + L1MC4 LINE L1 7838 7903 -139 27 0 0 0 chr5 67138059 67138086 -132492064 + AT_rich Low_complexity Low_complexity 1 27 0 1727 162 24 7 chr5 67138777 67139073 -132491077 + AluJo SINE Alu 1 301 -11 640 262 37 16 chr5 67139295 67139486 -132490664 + Charlie1a DNA MER1_type 20 214 -1241 2166 97 7 7 chr5 67139512 67139811 -132490339 - AluSx SINE Alu -11 301 3 2282 123 3 0 chr5 67141766 67142076 -132488074 - AluSx SINE Alu -1 311 1 2248 78 0 10 chr5 67142448 67142744 -132487406 - AluY SINE Alu -18 293 1 1180 160 80 8 chr5 67143680 67143942 -132486208 - Charlie1 DNA MER1_type -145 2616 2336 2384 82 7 0 chr5 67143944 67144249 -132485901 - AluSp SINE Alu 0 313 7 1713 104 17 4 chr5 67144254 67144494 -132485656 + AluSc SINE Alu 56 298 -11 619 267 37 16 chr5 67144520 67144711 -132485439 - Charlie1a DNA MER1_type -1241 214 20 1727 162 24 7 chr5 67144933 67145229 -132484921 - AluJo SINE Alu -11 301 1 27 0 0 0 chr5 67145920 67145947 -132484203 + AT_rich Low_complexity Low_complexity 1 27 0 1707 200 89 75 chr5 67145980 67146047 -132484103 - L1MC4 LINE L1 -139 7903 7838 2229 80 31 3 chr5 67146047 67146333 -132483817 - AluY SINE Alu -17 294 1 1707 200 89 75 chr5 67146333 67146906 -132483244 - L1MC4 LINE L1 -204 7838 7254 566 249 135 9 chr5 67146973 67147289 -132482861 - L1MC4 LINE L1 -1013 6982 6619 472 185 0 22 chr5 67147345 67147437 -132482713 + Tigger5 DNA MER2_type 2234 2323 0 347 151 23 81 chr5 67147452 67147538 -132482612 - L1MC4 LINE L1 -1458 6584 6504 1855 170 3 7 chr5 67147858 67148164 -132481986 - AluJo SINE Alu -7 305 1 332 286 110 0 chr5 67149130 67149221 -132480929 + MIR SINE MIR 2 102 -160 2344 45 3 7 chr5 67149764 67150050 -132480100 + AluY SINE Alu 1 285 -26 761 78 10 0 chr5 67150509 67150612 -132479538 - FRAM SINE Alu -13 163 60 2306 101 0 0 chr5 67150691 67150987 -132479163 - AluSg SINE Alu -14 296 1 2135 121 0 0 chr5 67151293 67151582 -132478568 + AluSg SINE Alu 1 289 -21 10609 27 7 133 chr5 67151646 67153232 -132476918 + SVA Other Other 1 1386 0 1168 151 5 15 chr5 67153243 67153448 -132476702 - MER2 DNA MER2_type -142 203 1 2386 72 0 0 chr5 67153642 67153933 -132476217 - AluY SINE Alu -20 291 1 248 261 84 101 chr5 67154081 67154200 -132475950 - MIR3 SINE MIR -78 130 14 1265 136 54 27 chr5 67154517 67154536 -132475614 - L1MC2 LINE L1 -1 6343 6326 2057 103 60 0 chr5 67154536 67154817 -132475333 + AluSx SINE Alu 1 298 -14 1265 136 54 27 chr5 67154817 67155055 -132475095 - L1MC2 LINE L1 -18 6326 6079 374 200 40 0 chr5 67155095 67155195 -132474955 + L1MCa LINE L1 2049 2152 -4274 3718 158 96 36 chr5 67155577 67156281 -132473869 - L1MB3 LINE L1 -2 6181 5409 1815 160 16 10 chr5 67156281 67156587 -132473563 - AluJb SINE Alu -4 308 1 3718 158 96 36 chr5 67156587 67156842 -132473308 - L1MB3 LINE L1 -774 5409 5170 22 56 0 0 chr5 67157576 67157612 -132472538 + AT_rich Low_complexity Low_complexity 1 36 0 2899 187 113 41 chr5 67157662 67157969 -132472181 - L1MD1 LINE L1 -2 6240 5956 1868 167 4 0 chr5 67157969 67158250 -132471900 + AluJb SINE Alu 1 282 -30 258 32 0 0 chr5 67158250 67158281 -132471869 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 2899 187 113 41 chr5 67158281 67159129 -132471021 - L1MD1 LINE L1 -285 5957 4996 1217 122 23 0 chr5 67159129 67159301 -132470849 - AluSg/x SINE Alu -22 290 115 2269 106 0 10 chr5 67159610 67159913 -132470237 + AluSq SINE Alu 1 300 -13 1509 165 21 70 chr5 67160036 67160363 -132469787 - AluJb SINE Alu -1 311 1 1910 158 0 0 chr5 67160677 67160968 -132469182 - AluSx SINE Alu -21 291 1 967 191 118 0 chr5 67161489 67161735 -132468415 - L1MD3 LINE L1 -2 7993 7719 732 163 41 0 chr5 67161745 67161868 -132468282 - AluJo SINE Alu -176 136 9 2000 95 0 0 chr5 67161927 67162190 -132467960 - AluY SINE Alu -29 282 20 1589 167 29 0 chr5 67162202 67162513 -132467637 - L1MD3 LINE L1 -276 7719 7400 368 226 32 11 chr5 67162527 67162620 -132467530 - MLT1F1 LTR MaLR -472 95 1 273 171 186 0 chr5 67162620 67162690 -132467460 - L1MD3 LINE L1 -725 7270 7188 528 223 92 8 chr5 67163182 67163312 -132466838 + L2 LINE L2 3173 3313 0 856 205 0 0 chr5 67164251 67164407 -132465743 - FAM SINE Alu -7 42 1 1418 312 67 30 chr5 67164753 67165414 -132464736 - MER115 DNA AcHobo 0 693 9 2090 106 3 3 chr5 67166689 67167002 -132463148 + AluSx SINE Alu 1 313 0 2178 103 21 0 chr5 67167253 67167543 -132462607 + AluSx SINE Alu 1 296 -16 1238 208 43 12 chr5 67167656 67167911 -132462239 + Tigger7 DNA MER2_type 6 268 -2219 410 245 0 11 chr5 67167914 67168008 -132462142 + Tigger7 DNA MER2_type 2395 2487 0 1571 148 43 59 chr5 67168278 67168583 -132461567 - AluSx SINE Alu -11 301 2 279 128 0 0 chr5 67168813 67168852 -132461298 - Alu SINE Alu -260 40 2 543 313 99 52 chr5 67168923 67169064 -132461086 - L1ME LINE L1 -327 5794 5661 1781 162 29 58 chr5 67169064 67169100 -132461050 + MER47A DNA MER2_type 1 37 -2286 10439 48 5 58 chr5 67169100 67170584 -132459566 - SVA Other Other 0 1386 1 1781 162 29 58 chr5 67170584 67170924 -132459226 + MER47A DNA MER2_type 37 366 0 543 313 99 52 chr5 67170924 67171245 -132458905 - L1ME LINE L1 -460 5661 5310 291 194 0 58 chr5 67171605 67171708 -132458442 - MER20B DNA MER1_type -30 753 657 1654 209 115 25 chr5 67171854 67172376 -132457774 + L1ME2 LINE L1 5586 6154 -10 536 156 193 18 chr5 67172398 67172507 -132457643 - MER5B DNA MER1_type -50 128 1 559 224 190 30 chr5 67172508 67172803 -132457347 - MER20B DNA MER1_type -252 531 190 269 236 0 0 chr5 67173011 67173066 -132457084 + MER46C DNA MER2_type 2 56 -282 396 105 40 40 chr5 67173324 67173400 -132456750 + MER46C DNA MER2_type 263 338 0 1764 74 0 9 chr5 67175304 67175533 -132454617 + AluSq SINE Alu 86 312 -1 21 57 0 0 chr5 67175624 67175659 -132454491 + AT_rich Low_complexity Low_complexity 1 35 0 2339 91 0 31 chr5 67175684 67176003 -132454147 - AluY SINE Alu -2 309 1 295 329 60 13 chr5 67176259 67176408 -132453742 + MER5B DNA MER1_type 2 157 -21 455 308 121 57 chr5 67176596 67176646 -132453504 + L2 LINE L2 2647 2692 -621 2062 112 10 48 chr5 67176646 67176814 -132453336 - AluSx SINE Alu -10 302 150 279 0 0 0 chr5 67176814 67176845 -132453305 + (TG)n Simple_repeat Simple_repeat 2 32 0 2062 112 10 48 chr5 67176845 67176990 -132453160 - AluSx SINE Alu -162 150 1 455 308 121 57 chr5 67176990 67177288 -132452862 + L2 LINE L2 2692 2970 -343 2118 140 7 0 chr5 67177288 67177596 -132452554 - AluSx SINE Alu -2 310 1 455 308 121 57 chr5 67177596 67177812 -132452338 + L2 LINE L2 2970 3250 -63 5060 149 50 100 chr5 67177978 67178300 -132451850 + Tigger3b DNA MER2_type 1 338 -2690 2437 88 3 0 chr5 67178300 67178608 -132451542 + AluSp SINE Alu 1 309 -4 5060 149 50 100 chr5 67178608 67179581 -132450569 + Tigger3b DNA MER2_type 338 1231 0 647 282 29 37 chr5 67179798 67180071 -132450079 - MLT1F1 LTR MaLR -296 271 1 23 54 0 0 chr5 67180432 67180469 -132449681 + AT_rich Low_complexity Low_complexity 1 37 0 2071 114 3 3 chr5 67180469 67180758 -132449392 - AluSx SINE Alu -23 289 1 200 361 75 23 chr5 67181360 67181493 -132448657 - MIR SINE MIR -122 140 1 274 344 58 19 chr5 67182161 67182315 -132447835 + L2 LINE L2 2689 2848 -466 1322 170 74 28 chr5 67182484 67182767 -132447383 - AluJo SINE Alu -4 298 3 209 234 312 0 chr5 67182795 67182872 -132447278 + L2 LINE L2 3160 3260 -12 24 0 0 0 chr5 67183536 67183560 -132446590 + AT_rich Low_complexity Low_complexity 1 24 0 230 304 0 0 chr5 67183900 67183956 -132446194 + MER91 DNA MER1_type 134 189 -1 2873 52 19 0 chr5 67184939 67185305 -132444845 + L1PA5 LINE L1 5779 6151 -3 22 0 0 0 chr5 67185305 67185327 -132444823 + AT_rich Low_complexity Low_complexity 1 22 0 1158 151 0 27 chr5 67185845 67186030 -132444120 + AluJo SINE Alu 1 180 -132 304 289 109 16 chr5 67186453 67186581 -132443569 + LTR16C LTR ERVL 352 491 0 1103 255 62 66 chr5 67186631 67186919 -132443231 - L2 LINE L2 -1114 2200 1912 2025 132 14 0 chr5 67186919 67187200 -132442950 - AluSx SINE Alu -27 285 1 2019 139 0 7 chr5 67187203 67187498 -132442652 - AluSx SINE Alu -19 293 1 1103 255 62 66 chr5 67187498 67187738 -132442412 - L2 LINE L2 -1404 1910 1670 1791 163 14 17 chr5 67188084 67188379 -132441771 + AluSx SINE Alu 1 294 -18 7355 57 5 18 chr5 67188408 67189789 -132440361 - SVA Other Other -723 1386 256 369 0 0 0 chr5 67189800 67189841 -132440309 + (GGGAGA)n Simple_repeat Simple_repeat 1 41 0 1683 172 25 0 chr5 67191002 67191281 -132438869 + AluJb SINE Alu 5 290 -22 310 231 19 19 chr5 67191478 67191582 -132438568 + L1ME LINE L1 951 1054 -5151 1416 255 101 25 chr5 67191591 67191986 -132438164 + L1ME LINE L1 1771 2135 -4080 2135 112 0 37 chr5 67191986 67192307 -132437843 + AluSx SINE Alu 3 311 -1 1416 255 101 25 chr5 67192307 67193168 -132436982 + L1ME LINE L1 2135 3086 -3129 415 290 35 12 chr5 67193205 67193464 -132436686 + L1ME LINE L1 3155 3419 -2796 334 264 5 20 chr5 67193691 67193844 -132436306 - MLT1H LTR MaLR -344 205 14 543 249 149 16 chr5 67193862 67194111 -132436039 - LTR40b LTR ERVL -1 461 180 702 225 136 21 chr5 67194449 67194729 -132435421 + L1ME2 LINE L1 5384 5695 -471 425 215 147 0 chr5 67194737 67194900 -132435250 + L1ME2 LINE L1 5968 6154 -10 276 143 0 0 chr5 67196877 67196926 -132433224 + L1MC5 LINE L1 7805 7853 -108 2101 122 7 0 chr5 67196948 67197244 -132432906 - AluSg SINE Alu -12 298 1 216 298 16 16 chr5 67197251 67197342 -132432808 + MER5B DNA MER1_type 56 133 -45 1666 260 154 44 chr5 67197479 67198207 -132431943 + L2 LINE L2 1626 2433 -881 277 222 111 26 chr5 67198525 67198642 -132431508 - MLT1L LTR MaLR -8 607 481 247 337 41 66 chr5 67198658 67198854 -132431296 - MLT1L LTR MaLR -62 553 363 1649 159 7 14 chr5 67199121 67199222 -132430928 + AluJb SINE Alu 17 117 -195 378 0 0 0 chr5 67199222 67199264 -132430886 + (CA)n Simple_repeat Simple_repeat 2 43 0 1649 159 7 14 chr5 67199264 67199438 -132430712 + AluJb SINE Alu 117 290 -22 1955 125 38 3 chr5 67199440 67199728 -132430422 + AluSx SINE Alu 3 300 -12 1680 184 3 17 chr5 67199957 67200256 -132429894 + AluJo SINE Alu 1 295 -17 206 231 0 0 chr5 67200284 67200323 -132429827 + (TG)n Simple_repeat Simple_repeat 2 40 0 1664 127 88 14 chr5 67200590 67200873 -132429277 + AluJb SINE Alu 1 304 -8 453 157 10 39 chr5 67201571 67201673 -132428477 + MER3 DNA MER1_type 111 209 0 355 228 32 73 chr5 67202094 67202217 -132427933 + MIR SINE MIR 119 236 -26 2205 68 43 7 chr5 67202228 67202508 -132427642 + AluY SINE Alu 1 290 -21 198 189 0 122 chr5 67202508 67202582 -132427568 + MIR SINE MIR 172 236 -26 2074 110 17 0 chr5 67202607 67202897 -132427253 - AluSx SINE Alu -17 295 1 942 196 29 25 chr5 67202985 67203230 -132426920 - MER96B DNA MER1_type? -171 246 1 2222 65 27 0 chr5 67203995 67204288 -132425862 - AluY SINE Alu -10 301 1 439 268 95 49 chr5 67205488 67205583 -132424567 - MER112 DNA MER1_type -6 254 165 673 179 92 6 chr5 67205583 67205756 -132424394 + MER53 DNA DNA 1 188 -1 439 268 95 49 chr5 67205756 67205903 -132424247 - MER112 DNA MER1_type -95 165 1 23 68 0 0 chr5 67206779 67206823 -132423327 + AT_rich Low_complexity Low_complexity 1 44 0 7297 147 41 25 chr5 67207024 67209254 -132420896 - L1MA8 LINE L1 -197 6094 3829 189 0 0 0 chr5 67209769 67209790 -132420360 + (CA)n Simple_repeat Simple_repeat 2 22 0 1978 113 18 4 chr5 67209799 67210073 -132420077 + AluSx SINE Alu 13 290 -22 258 56 0 0 chr5 67210073 67210109 -132420041 + (TA)n Simple_repeat Simple_repeat 2 37 0 34 24 0 0 chr5 67210358 67210399 -132419751 + AT_rich Low_complexity Low_complexity 1 41 0 1928 167 10 3 chr5 67210456 67210761 -132419389 + AluJb SINE Alu 1 307 -5 1879 143 33 3 chr5 67210928 67211228 -132418922 + AluSq SINE Alu 1 309 -4 264 293 45 15 chr5 67211231 67211364 -132418786 - L1MC4 LINE L1 -143 7899 7763 293 231 102 19 chr5 67211439 67211547 -132418603 - L1MC4 LINE L1 -384 7658 7542 31 68 0 0 chr5 67212986 67213045 -132417105 + AT_rich Low_complexity Low_complexity 1 59 0 249 33 0 0 chr5 67213632 67213662 -132416488 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 3436 86 1 5 chr5 67213662 67214162 -132415988 - L1PA8 LINE L1 -24 6148 5647 2262 211 58 7 chr5 67215077 67215661 -132414489 - MER90 LTR ERV1 0 614 1 1688 155 3 43 chr5 67215766 67216088 -132414062 - AluJo SINE Alu -3 309 1 267 152 0 0 chr5 67216213 67216259 -132413891 + (TG)n Simple_repeat Simple_repeat 1 46 0 1679 173 14 14 chr5 67216261 67216545 -132413605 - AluSx SINE Alu -28 284 1 1721 276 142 32 chr5 67216635 67217384 -132412766 - L2 LINE L2 -321 2992 2130 10070 36 6 8 chr5 67217384 67219402 -132410748 + L1PA4 LINE L1 4128 6155 0 1721 276 142 32 chr5 67219402 67219496 -132410654 - L2 LINE L2 -1183 2130 2048 184 370 152 0 chr5 67219510 67219602 -132410548 + L2 LINE L2 3134 3239 -33 205 299 125 21 chr5 67219620 67219764 -132410386 - L2 LINE L2 -945 2369 2211 2060 99 14 17 chr5 67219979 67220273 -132409877 + AluY SINE Alu 1 293 -18 426 157 68 32 chr5 67220764 67220893 -132409257 + L1ME LINE L1 5600 5731 -433 610 227 0 0 chr5 67221817 67221945 -132408205 - L1M4 LINE L1 -562 5612 5485 * 1427 225 36 40 chr5 67221943 67222437 -132407713 - L1MC4a LINE L1 -235 7573 7082 342 268 68 41 chr5 67222670 67222893 -132407257 + MER5C DNA MER1_type 1 324 0 2125 118 3 0 chr5 67223258 67223554 -132406596 + AluSx SINE Alu 11 307 -5 417 259 32 51 chr5 67224090 67224248 -132405902 - MIR3 SINE MIR -17 191 37 207 157 0 39 chr5 67224355 67224406 -132405744 + A-rich Low_complexity Low_complexity 2 50 0 878 182 27 58 chr5 67224804 67225029 -132405121 + MER20 DNA MER1_type 1 218 -1 26 82 0 0 chr5 67226588 67226649 -132403501 + AT_rich Low_complexity Low_complexity 1 61 0 614 261 15 0 chr5 67227175 67227309 -132402841 + MER58A DNA MER1_type 2 137 0 360 98 0 0 chr5 67227401 67227452 -132402698 + MER58A DNA MER1_type 174 224 0 1095 205 5 5 chr5 67227481 67227691 -132402459 + AluJo SINE Alu 85 294 -18 201 265 15 59 chr5 67227869 67227937 -132402213 + L2 LINE L2 3127 3191 -81 372 180 56 0 chr5 67228294 67228383 -132401767 - L1MB3 LINE L1 -3 6180 6087 4076 170 50 24 chr5 67228385 67228459 -132401691 - L1MA4 LINE L1 -281 6019 5948 1966 144 0 3 chr5 67228459 67228758 -132401392 - AluSx SINE Alu -14 298 1 4076 170 50 24 chr5 67228758 67230252 -132399898 - L1MA4 LINE L1 -352 5948 4405 510 88 81 0 chr5 67230280 67230428 -132399722 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 2223 105 3 0 chr5 67230454 67230759 -132399391 - AluY SINE Alu -5 306 1 1400 172 14 7 chr5 67230759 67231038 -132399112 - L1MA4 LINE L1 -1732 4414 4134 29 28 0 0 chr5 67232991 67233027 -132397123 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 67233954 67233977 -132396173 + AT_rich Low_complexity Low_complexity 1 23 0 29 60 0 0 chr5 67235284 67235334 -132394816 + AT_rich Low_complexity Low_complexity 1 50 0 2392 69 0 7 chr5 67235524 67235827 -132394323 - AluY SINE Alu -10 301 1 21 0 0 0 chr5 67236326 67236347 -132393803 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 67236504 67236541 -132393609 + AT_rich Low_complexity Low_complexity 1 37 0 495 287 110 31 chr5 67236984 67237238 -132392912 - L2 LINE L2 -4 3309 3036 24 32 0 0 chr5 67237667 67237698 -132392452 + AT_rich Low_complexity Low_complexity 1 31 0 795 204 105 11 chr5 67238382 67238573 -132391577 - MER6B DNA MER2_type -1 209 1 295 281 141 8 chr5 67238975 67239096 -132391054 - MIR SINE MIR -77 185 49 1853 176 39 0 chr5 67239308 67239638 -132390512 - MER2 DNA MER2_type -1 343 1 3377 122 80 42 chr5 67240474 67241115 -132389035 - L1MA8 LINE L1 -108 6183 5519 25 0 0 0 chr5 67241197 67241222 -132388928 + AT_rich Low_complexity Low_complexity 1 25 0 453 81 0 0 chr5 67241401 67241463 -132388687 + (TCCTG)n Simple_repeat Simple_repeat 2 63 0 1996 102 50 3 chr5 67241463 67241741 -132388409 - AluSc SINE Alu -18 291 1 2257 88 7 13 chr5 67241886 67242193 -132387957 - AluSx SINE Alu -7 305 1 1591 204 0 26 chr5 67242414 67242722 -132387428 - AluJb SINE Alu -12 300 1 211 186 47 0 chr5 67243185 67243228 -132386922 - L2 LINE L2 -4 3268 3224 1573 188 7 7 chr5 67243401 67243683 -132386467 + AluJo SINE Alu 1 282 -30 574 239 0 43 chr5 67243719 67243857 -132386293 - FLAM_A SINE Alu -1 132 1 280 394 21 16 chr5 67243884 67244077 -132386073 - L2 LINE L2 -339 2975 2782 342 241 58 115 chr5 67244092 67244218 -132385932 + MER117 DNA MER1_type 1 116 -81 458 258 15 15 chr5 67244218 67244350 -132385800 + MER94 DNA DNA 3 134 0 342 241 58 115 chr5 67244350 67244397 -132385753 + MER117 DNA MER1_type 116 164 -33 641 320 52 47 chr5 67244418 67244862 -132385288 - L2 LINE L2 -559 2755 2310 302 320 161 48 chr5 67245213 67245647 -132384503 - L2 LINE L2 -1176 2138 1656 2224 98 0 23 chr5 67245678 67245985 -132384165 + AluSx SINE Alu 1 300 -12 1987 121 11 0 chr5 67246148 67246428 -132383722 - AluSx SINE Alu -19 293 11 556 335 143 17 chr5 67246894 67247413 -132382737 + L2 LINE L2 2028 2611 -703 690 198 176 13 chr5 67247414 67247652 -132382498 + MER33 DNA MER1_type 1 277 -47 1633 183 23 23 chr5 67247665 67247966 -132382184 + AluJo SINE Alu 3 303 -9 207 314 70 96 chr5 67248029 67248185 -132381965 + L2 LINE L2 2610 2761 -553 334 309 52 116 chr5 67248268 67248614 -132381536 + L2 LINE L2 2947 3270 -2 614 154 41 8 chr5 67248793 67248916 -132381234 - L1MB7 LINE L1 -11 6173 6047 186 43 0 0 chr5 67250875 67250898 -132379252 + (TG)n Simple_repeat Simple_repeat 2 24 0 257 234 31 0 chr5 67251065 67251129 -132379021 + MIR SINE MIR 88 153 -109 245 174 22 0 chr5 67251160 67251206 -132378944 + Tigger4(Zombi) DNA MER2_type 2684 2730 -1 281 250 48 36 chr5 67251947 67252031 -132378119 - MIR SINE MIR -32 230 146 301 164 131 0 chr5 67252034 67252095 -132378055 + MER58A DNA MER1_type 154 222 -2 767 189 75 44 chr5 67254228 67254456 -132375694 - MER46A DNA MER2_type 0 236 2 352 216 14 14 chr5 67256258 67256332 -132373818 + Tigger3(Golem) DNA MER2_type 1 74 -2955 2211 105 0 0 chr5 67256334 67256628 -132373522 + AluSx SINE Alu 1 294 -18 576 215 23 0 chr5 67256646 67256776 -132373374 + AluJb SINE Alu 1 133 -179 1694 173 0 13 chr5 67256784 67257084 -132373066 + AluJo SINE Alu 1 296 -16 316 136 0 0 chr5 67257086 67257130 -132373020 + Tigger3(Golem) DNA MER2_type 70 113 -2916 1020 127 9 241 chr5 67257134 67257466 -132372684 + Tigger3(Golem) DNA MER2_type 2774 3028 -1 2461 200 11 4 chr5 67258799 67259320 -132370830 - L1MB7 LINE L1 0 6184 5660 276 146 0 0 chr5 67259352 67259393 -132370757 + L1M4 LINE L1 5525 5565 -613 231 264 0 0 chr5 67259425 67259478 -132370672 + MER3 DNA MER1_type 38 90 -119 * 241 245 0 0 chr5 67259435 67259484 -132370666 - Charlie5 DNA MER1_type -2403 209 161 246 350 43 21 chr5 67260042 67260182 -132369968 - L2 LINE L2 -444 2870 2728 28 48 0 0 chr5 67260452 67260494 -132369656 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr5 67260673 67260705 -132369445 + AT_rich Low_complexity Low_complexity 1 32 0 307 301 168 25 chr5 67260843 67261039 -132369111 + MIR SINE MIR 19 242 -20 284 248 79 50 chr5 67261289 67261390 -132368760 - MIR SINE MIR 0 262 159 2809 3 0 3 chr5 67262083 67262395 -132367755 - AluYa5 SINE Alu 0 311 1 1898 151 0 10 chr5 67263460 67263759 -132366391 + AluJb SINE Alu 1 296 -16 1553 190 35 3 chr5 67263775 67264065 -132366085 + AluJb SINE Alu 1 299 -13 21 0 0 0 chr5 67264345 67264366 -132365784 + AT_rich Low_complexity Low_complexity 1 21 0 291 335 106 39 chr5 67267887 67268275 -132361875 - L2 LINE L2 -561 2753 2340 28 71 0 0 chr5 67268922 67268978 -132361172 + AT_rich Low_complexity Low_complexity 1 56 0 635 286 54 20 chr5 67269008 67269211 -132360939 + MIR SINE MIR 53 262 0 31 58 0 0 chr5 67269319 67269371 -132360779 + AT_rich Low_complexity Low_complexity 1 52 0 43603 40 5 2 chr5 67269398 67275530 -132354620 - L1PA4 LINE L1 -3 6152 3 402 249 58 67 chr5 67276182 67276381 -132353769 - MIR SINE MIR -1 261 66 864 133 0 16 chr5 67276715 67276843 -132353307 - FLAM_C SINE Alu -17 126 1 441 0 0 0 chr5 67277435 67277484 -132352666 + (TG)n Simple_repeat Simple_repeat 2 50 0 290 304 22 0 chr5 67277516 67277608 -132352542 - MIR SINE MIR -110 152 59 186 71 0 0 chr5 67278340 67278368 -132351782 + (A)n Simple_repeat Simple_repeat 1 28 0 848 164 0 0 chr5 67279603 67279737 -132350413 + AluJo SINE Alu 87 220 -92 284 102 61 20 chr5 67279737 67279786 -132350364 + AluJo SINE Alu 86 136 -166 1162 210 112 4 chr5 67279869 67279992 -132350158 + AluJo SINE Alu 1 109 -193 219 69 0 0 chr5 67279992 67280021 -132350129 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1162 210 112 4 chr5 67280021 67280164 -132349986 + AluJo SINE Alu 109 296 -6 2242 89 7 0 chr5 67281845 67282166 -132347984 - AluSq SINE Alu 0 323 1 22 0 0 0 chr5 67282869 67282891 -132347259 + AT_rich Low_complexity Low_complexity 1 22 0 1561 169 3 54 chr5 67282895 67283190 -132346960 + AluJb SINE Alu 1 280 -32 207 0 0 0 chr5 67283193 67283216 -132346934 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr5 67283542 67283566 -132346584 + AT_rich Low_complexity Low_complexity 1 24 0 1794 161 0 35 chr5 67285703 67286013 -132344137 - AluJo SINE Alu -13 299 1 23 54 0 0 chr5 67288777 67288814 -132341336 + AT_rich Low_complexity Low_complexity 1 37 0 1059 40 0 0 chr5 67288871 67288997 -132341153 + AluY SINE Alu 175 300 -11 322 290 0 14 chr5 67289341 67289410 -132340740 + MIR SINE MIR 12 79 -183 23 0 0 0 chr5 67289410 67289433 -132340717 + AT_rich Low_complexity Low_complexity 1 23 0 266 287 35 0 chr5 67289433 67289548 -132340602 - L1MC4 LINE L1 -2 8040 7922 447 87 0 0 chr5 67289588 67289657 -132340493 + (CA)n Simple_repeat Simple_repeat 2 70 0 492 299 43 12 chr5 67289698 67289862 -132340288 + MIR SINE MIR 84 252 -10 479 288 28 34 chr5 67290012 67290189 -132339961 - MER5B DNA MER1_type -1 177 2 24 32 0 0 chr5 67291257 67291288 -132338862 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 67292818 67292847 -132337303 + AT_rich Low_complexity Low_complexity 1 29 0 2611 49 0 0 chr5 67294879 67295184 -132334966 - AluY SINE Alu -6 305 1 1830 178 7 0 chr5 67295962 67296266 -132333884 + AluJb SINE Alu 1 306 -6 249 289 148 0 chr5 67296397 67296532 -132333618 + HAL1 LINE L1 1611 1765 -742 746 192 17 0 chr5 67296656 67296776 -132333374 - FLAM_C SINE Alu -19 124 3 2292 117 0 0 chr5 67296789 67297097 -132333053 - AluSp SINE Alu -5 308 1 602 344 69 30 chr5 67297262 67297699 -132332451 - L1ME LINE L1 -392 5770 5315 2122 136 0 16 chr5 67297757 67298074 -132332076 - AluSx SINE Alu 0 312 1 341 286 87 91 chr5 67298117 67298348 -132331802 - L1ME LINE L1 -913 5233 5004 573 268 119 6 chr5 67298769 67298937 -132331213 - MER5A DNA MER1_type 0 189 3 4825 261 47 28 chr5 67299024 67300770 -132329380 + L1MEc LINE L1 73 1851 -4545 2684 215 55 20 chr5 67300787 67301553 -132328597 + L1MEc LINE L1 1512 2304 -4092 1700 134 99 3 chr5 67301574 67301858 -132328292 + AluSx SINE Alu 1 311 -1 2256 230 62 6 chr5 67301912 67302555 -132327595 - L1ME LINE L1 -1158 4988 4310 1713 139 171 7 chr5 67302556 67302865 -132327285 - MER47A DNA MER2_type 0 366 7 1307 236 147 30 chr5 67302867 67303405 -132326745 - L1ME LINE L1 -1832 4314 3714 1877 262 23 17 chr5 67303413 67303929 -132326221 + LTR40a LTR ERVL 1 519 0 290 239 23 23 chr5 67303945 67304033 -132326117 + HERVL40 LTR ERVL 19 106 -5424 1641 248 28 45 chr5 67304186 67304694 -132325456 + HERVL40 LTR ERVL 2124 2622 -2908 540 185 185 49 chr5 67304731 67304893 -132325257 + HERVL40 LTR ERVL 2686 2869 -2661 256 298 39 66 chr5 67304967 67305148 -132325002 + HERVL68 LTR ERVL 2461 2636 -401 578 335 57 16 chr5 67305308 67305678 -132324472 + MER89-int LTR ERV1 6118 6502 -299 506 316 37 5 chr5 67305558 67305748 -132324402 + HERVL68 LTR ERVL 2783 2978 -59 * 1615 185 7 3 chr5 67305987 67306279 -132323871 - AluJb SINE Alu -19 293 1 247 273 88 31 chr5 67306411 67306605 -132323545 + L1MEc LINE L1 2279 2483 -3732 2219 100 7 7 chr5 67306639 67306938 -132323212 - AluSx SINE Alu -13 299 1 540 318 7 0 chr5 67306945 67307093 -132323057 - L2 LINE L2 -243 3070 2922 2256 106 0 13 chr5 67307399 67307700 -132322450 - AluSq SINE Alu -16 297 1 867 165 0 0 chr5 67307948 67308081 -132322069 + FLAM_C SINE Alu 1 133 0 28 48 0 0 chr5 67308169 67308211 -132321939 + AT_rich Low_complexity Low_complexity 1 42 0 418 377 20 10 chr5 67308623 67308822 -132321328 + MIR SINE MIR 2 202 -60 23 33 0 0 chr5 67308883 67308913 -132321237 + AT_rich Low_complexity Low_complexity 1 30 0 2200 136 0 0 chr5 67308913 67309221 -132320929 + AluSx SINE Alu 1 308 -4 349 298 65 99 chr5 67309600 67310003 -132320147 + L1MEc LINE L1 3451 3839 -2376 1849 196 54 50 chr5 67310004 67310505 -132319645 + MLT1D LTR MaLR 1 503 -2 1477 231 16 7 chr5 67310510 67310818 -132319332 + HERVL68 LTR ERVL 4296 4606 -1158 2037 234 39 33 chr5 67310821 67312067 -132318083 + L1M4c LINE L1 1276 2690 -3873 31 44 0 0 chr5 67312101 67312146 -132318004 + AT_rich Low_complexity Low_complexity 1 45 0 295 222 28 0 chr5 67312152 67312224 -132317926 + L1M4c LINE L1 2676 2749 -3633 3009 243 63 18 chr5 67312239 67313234 -132316916 + L1MB2 LINE L1 6 1045 -5818 6975 167 29 53 chr5 67313239 67313923 -132316227 + L1MB2 LINE L1 1094 1793 -5070 2033 110 38 3 chr5 67313923 67314213 -132315937 + AluSc SINE Alu 1 300 -9 6975 167 29 53 chr5 67314213 67315090 -132315060 + L1MB2 LINE L1 1793 2763 -4100 5822 203 27 12 chr5 67315117 67316044 -132314106 + L1 LINE L1 3011 3967 -2895 2364 85 3 10 chr5 67316044 67316350 -132313800 + AluY SINE Alu 1 304 -7 5822 203 27 12 chr5 67316350 67316812 -132313338 + L1 LINE L1 3967 4421 -2441 2787 224 69 1 chr5 67316828 67317597 -132312553 + L1MB2 LINE L1 3744 4564 -2298 2184 100 10 17 chr5 67317600 67317899 -132312251 + AluSq SINE Alu 1 297 -16 38923 74 12 8 chr5 67317909 67324029 -132306121 + L1PA6 LINE L1 11 6152 -2 5621 180 59 35 chr5 67324042 67325305 -132304845 + L1MB2 LINE L1 4570 5802 -1085 664 173 7 65 chr5 67325305 67325444 -132304706 + FLAM_C SINE Alu 1 131 -2 5621 180 59 35 chr5 67325444 67325609 -132304541 + L1MB2 LINE L1 5802 5962 -925 1449 153 61 58 chr5 67325609 67325904 -132304246 + AluJo SINE Alu 1 296 -16 5621 180 59 35 chr5 67325904 67326724 -132303426 + L1MB2 LINE L1 5962 6887 0 513 340 35 10 chr5 67326732 67326929 -132303221 - L3 LINE CR1 -737 840 639 536 222 44 52 chr5 67327250 67327385 -132302765 + MIR SINE MIR 39 172 -90 2297 109 0 0 chr5 67327452 67327755 -132302395 - AluSg SINE Alu -7 303 1 1511 199 108 9 chr5 67327868 67328211 -132301939 + MLT1E1 LTR MaLR 268 504 -1 195 304 134 73 chr5 67328547 67328860 -132301290 - L2 LINE L2 -591 2723 2392 204 342 0 0 chr5 67328889 67328965 -132301185 - L2 LINE L2 -1020 2294 2219 2159 122 3 0 chr5 67329214 67329510 -132300640 - AluSx SINE Alu -15 297 1 313 261 43 58 chr5 67329557 67329695 -132300455 - L2 LINE L2 -456 2858 2723 2202 86 0 51 chr5 67329795 67330110 -132300040 + AluSc SINE Alu 1 299 -10 39 74 0 0 chr5 67330808 67330889 -132299261 + AT_rich Low_complexity Low_complexity 1 81 0 397 282 51 60 chr5 67331257 67331473 -132298677 + L1ME4a LINE L1 5694 5907 -214 857 216 28 0 chr5 67332594 67332770 -132297380 + MER3 DNA MER1_type 2 182 -27 198 0 0 0 chr5 67332914 67332936 -132297214 + (T)n Simple_repeat Simple_repeat 1 22 0 363 336 52 0 chr5 67332963 67333079 -132297071 - L2 LINE L2 -10 3303 3182 2032 179 62 31 chr5 67333287 67333488 -132296662 + MLT1C LTR MaLR 1 194 -273 270 56 0 0 chr5 67333488 67333524 -132296626 + (CA)n Simple_repeat Simple_repeat 1 36 0 2032 179 62 31 chr5 67333524 67333775 -132296375 + MLT1C LTR MaLR 194 467 0 2313 96 0 13 chr5 67333917 67334229 -132295921 - AluSx SINE Alu -2 310 3 431 305 146 43 chr5 67335003 67335469 -132294681 - L2 LINE L2 -902 2412 1899 346 243 26 127 chr5 67335522 67335608 -132294542 + L1MEd LINE L1 418 476 -6054 2132 113 0 10 chr5 67335608 67335908 -132294242 + AluSg1 SINE Alu 1 297 -12 346 243 26 127 chr5 67335908 67336010 -132294140 + L1MEd LINE L1 476 587 -5943 554 304 108 14 chr5 67336032 67336457 -132293693 + L1MEd LINE L1 1564 2028 -4512 309 378 93 10 chr5 67336606 67336799 -132293351 + L1MEd LINE L1 661 869 -5661 1715 105 67 46 chr5 67336805 67337090 -132293060 + AluSx SINE Alu 1 291 -21 229 253 40 0 chr5 67337109 67337184 -132292966 + L1ME1 LINE L1 22 99 -5971 192 152 0 0 chr5 67337321 67337354 -132292796 + A-rich Low_complexity Low_complexity 1 33 0 241 219 37 24 chr5 67337381 67337463 -132292687 + L1ME1 LINE L1 111 193 -5877 492 296 78 29 chr5 67337840 67338083 -132292067 + L1ME1 LINE L1 227 481 -5589 301 257 87 44 chr5 67338176 67338382 -132291768 + L1ME1 LINE L1 466 680 -5403 * 492 214 0 0 chr5 67338379 67338477 -132291673 + L1M4 LINE L1 3758 3855 -2291 1696 175 16 16 chr5 67338477 67338780 -132291370 + AluJo SINE Alu 1 303 -9 1644 235 36 46 chr5 67338787 67338951 -132291199 + L1ME1 LINE L1 5649 5813 -353 2223 116 3 0 chr5 67338951 67339254 -132290896 - AluSx SINE Alu -8 304 1 1644 235 36 46 chr5 67339254 67339592 -132290558 + L1ME1 LINE L1 5813 6146 -20 461 224 8 16 chr5 67339642 67339767 -132290383 + L1MC5 LINE L1 7790 7913 -48 1092 214 18 67 chr5 67339784 67339874 -132290276 + L1M4 LINE L1 3999 4092 -2054 2263 106 0 0 chr5 67339874 67340175 -132289975 + AluSx SINE Alu 1 301 -11 1092 214 18 67 chr5 67340175 67340426 -132289724 + L1M4 LINE L1 4092 4323 -1823 638 224 27 104 chr5 67340438 67340991 -132289159 + L1ME1 LINE L1 3395 5911 -189 2212 113 3 0 chr5 67341810 67342111 -132288039 + AluSc SINE Alu 1 302 -7 425 245 170 40 chr5 67342201 67342401 -132287749 + L1MEc LINE L1 1334 1559 -4837 618 292 55 4 chr5 67342439 67342746 -132287404 - L1MCa LINE L1 -4701 1906 1399 326 138 5 23 chr5 67342856 67342924 -132287226 + Alu SINE Alu 1 47 -255 2100 91 0 11 chr5 67342924 67343199 -132286951 + AluSq SINE Alu 21 292 -21 1438 86 9 0 chr5 67343479 67343742 -132286408 + AluSp SINE Alu 62 294 -19 278 278 62 28 chr5 67344124 67344268 -132285882 - LTR67 LTR ERVL -50 507 359 775 147 0 22 chr5 67344573 67344755 -132285395 + FLAM_C SINE Alu 1 179 0 352 189 40 0 chr5 67344862 67344936 -132285214 + L1ME LINE L1 5587 5663 -503 387 265 20 0 chr5 67344973 67345075 -132285075 + L1ME3 LINE L1 5526 5629 -533 * 675 238 44 0 chr5 67345066 67345275 -132284875 + L1ME3 LINE L1 5837 6071 -91 2339 102 0 0 chr5 67345287 67345590 -132284560 + AluSq SINE Alu 1 303 -10 907 109 0 31 chr5 67345603 67345731 -132284419 + AluSq/x SINE Alu 1 124 -188 357 267 0 0 chr5 67345731 67345836 -132284314 + (TA)n Simple_repeat Simple_repeat 1 105 0 315 315 0 0 chr5 67345837 67345926 -132284224 + L1MC4 LINE L1 6615 6703 -1339 317 322 0 0 chr5 67345958 67346048 -132284102 - L1MC4 LINE L1 -1339 6703 6614 342 0 0 0 chr5 67346048 67346086 -132284064 + (CA)n Simple_repeat Simple_repeat 2 39 0 326 335 39 7 chr5 67346179 67346334 -132283816 + L1ME1 LINE L1 716 875 -5667 963 219 67 71 chr5 67346436 67346733 -132283417 + LTR41 LTR ERVL 6 301 -472 1380 223 170 22 chr5 67346738 67347179 -132282971 + L1ME1 LINE L1 3094 3468 -3176 2198 113 0 0 chr5 67347179 67347480 -132282670 + AluSx SINE Alu 1 301 -11 1380 223 170 22 chr5 67347480 67347637 -132282513 + L1ME1 LINE L1 3468 3600 -3044 1650 158 8 11 chr5 67347637 67347903 -132282247 + AluJo SINE Alu 37 301 -11 1380 223 170 22 chr5 67347903 67347984 -132282166 + L1ME1 LINE L1 3600 3875 -2769 237 216 59 0 chr5 67348018 67348069 -132282081 + L1ME1 LINE L1 4263 4316 -2328 1481 210 38 38 chr5 67348090 67348481 -132281669 + L1ME1 LINE L1 4414 4804 -1840 1149 101 18 6 chr5 67348478 67348646 -132281504 + THE1-int LTR MaLR 17 186 -1394 * 1754 108 90 4 chr5 67348631 67348909 -132281241 - THE1C-int LTR MaLR -1278 302 1 1913 139 54 35 chr5 67348909 67349277 -132280873 - THE1C LTR MaLR 0 375 1 2891 192 79 51 chr5 67349277 67350538 -132279612 + L1ME1 LINE L1 4801 6106 -576 1119 126 6 23 chr5 67350538 67350713 -132279437 + AluJb SINE Alu 137 308 -4 1635 189 71 14 chr5 67350715 67351081 -132279069 + L1ME1 LINE L1 6101 6487 -177 335 184 0 15 chr5 67352401 67352468 -132277682 + FLAM SINE Alu 73 133 0 920 185 28 0 chr5 67352895 67353073 -132277077 + MER5A DNA MER1_type 1 183 -6 329 313 94 98 chr5 67353253 67353418 -132276732 + L2 LINE L2 2553 2717 -555 1745 148 0 40 chr5 67353418 67353716 -132276434 - AluJo SINE Alu -20 292 7 329 313 94 98 chr5 67353716 67354094 -132276056 + L2 LINE L2 2717 3089 -183 2600 192 89 56 chr5 67354130 67354460 -132275690 - Charlie1a DNA MER1_type -1312 1449 1131 1434 116 14 0 chr5 67354460 67354676 -132275474 - L1PA14 LINE L1 0 6161 5943 2600 192 89 56 chr5 67354676 67355146 -132275004 - Charlie1a DNA MER1_type -1630 1131 623 1539 206 69 39 chr5 67355138 67355571 -132274579 - Charlie1a DNA MER1_type -1009 446 1 * 260 250 153 48 chr5 67355586 67355710 -132274440 + L2 LINE L2 3177 3313 0 276 243 14 0 chr5 67357569 67357643 -132272507 - L1MC4 LINE L1 0 8042 7968 213 180 0 33 chr5 67357902 67357963 -132272187 + (TA)n Simple_repeat Simple_repeat 2 60 0 258 220 0 0 chr5 67357963 67358013 -132272137 - L1MC4 LINE L1 -544 7498 7449 768 181 0 8 chr5 67358887 67359014 -132271136 + FLAM_A SINE Alu 1 126 -7 705 238 100 0 chr5 67359316 67359526 -132270624 - L1ME3A LINE L1 -5 6165 5935 29 28 0 0 chr5 67360551 67360587 -132269563 + AT_rich Low_complexity Low_complexity 1 36 0 703 185 0 0 chr5 67360592 67360711 -132269439 - AluJb SINE Alu -193 119 1 326 173 0 0 chr5 67360785 67360837 -132269313 - FLAM SINE Alu -21 112 61 2181 117 10 3 chr5 67361021 67361329 -132268821 + AluSg SINE Alu 1 310 0 242 311 81 47 chr5 67362229 67362377 -132267773 - L2 LINE L2 -191 3081 2929 398 327 89 27 chr5 67362477 67362734 -132267416 - L2 LINE L2 -586 2728 2456 2220 117 0 0 chr5 67362791 67363090 -132267060 - AluSx SINE Alu -13 299 1 848 285 76 21 chr5 67363114 67363402 -132266748 - MLT1I LTR MaLR -105 304 1 251 326 128 20 chr5 67363406 67363602 -132266548 - L2 LINE L2 -854 2460 2244 2606 41 0 22 chr5 67363784 67364100 -132266050 - AluY SINE Alu -1 310 2 255 103 0 0 chr5 67368199 67368238 -132261912 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 21 36 0 0 chr5 67370051 67370079 -132260071 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 67371064 67371086 -132259064 + AT_rich Low_complexity Low_complexity 1 22 0 2220 79 14 0 chr5 67371798 67372088 -132258062 + AluY SINE Alu 1 294 -17 803 254 33 21 chr5 67372411 67372651 -132257499 - L2 LINE L2 -399 2915 2673 227 143 122 0 chr5 67373054 67373103 -132257047 + MIR SINE MIR 145 199 -63 2716 218 59 18 chr5 67373187 67373812 -132256338 - MER82 DNA MER2_type 0 653 3 456 288 16 16 chr5 67375911 67376036 -132254114 - MIR3 SINE MIR -10 198 74 27 62 0 0 chr5 67376865 67376913 -132253237 + AT_rich Low_complexity Low_complexity 1 48 0 1669 157 8 0 chr5 67378446 67378701 -132251449 - AluJb SINE Alu -38 274 18 23 0 0 0 chr5 67380027 67380050 -132250100 + AT_rich Low_complexity Low_complexity 1 23 0 1876 140 3 47 chr5 67380305 67380626 -132249524 - AluSx SINE Alu -5 307 1 803 276 24 20 chr5 67380802 67381048 -132249102 - MIR SINE MIR -10 252 6 1041 178 29 62 chr5 67381225 67381466 -132248684 + MER46A DNA MER2_type 1 233 -3 213 237 0 0 chr5 67382565 67382624 -132247526 + GA-rich Low_complexity Low_complexity 5 63 0 183 283 0 0 chr5 67382687 67382786 -132247364 + GA-rich Low_complexity Low_complexity 1 99 0 477 240 27 34 chr5 67383738 67383884 -132246266 - MIR SINE MIR -1 261 117 2033 139 3 0 chr5 67384358 67384645 -132245505 - AluSx SINE Alu -24 288 1 2246 109 3 19 chr5 67384774 67385085 -132245065 - AluSx SINE Alu -6 306 1 23 68 0 0 chr5 67385210 67385254 -132244896 + AT_rich Low_complexity Low_complexity 1 44 0 407 330 70 15 chr5 67385298 67385498 -132244652 - MIR SINE MIR -3 259 49 22 88 0 0 chr5 67387031 67387088 -132243062 + AT_rich Low_complexity Low_complexity 1 57 0 747 249 78 36 chr5 67387260 67387790 -132242360 - L1MC4a LINE L1 -1875 5933 5260 845 291 65 98 chr5 67387873 67388534 -132241616 - L1MC4a LINE L1 -978 5168 4504 264 163 0 0 chr5 67388534 67388577 -132241573 - 5S rRNA rRNA -78 43 1 845 291 65 98 chr5 67388577 67388842 -132241308 - L1MC4a LINE L1 -1642 4504 4232 326 197 191 28 chr5 67388991 67389169 -132240981 - L1MC4a LINE L1 -1684 6124 5918 28 48 0 0 chr5 67389725 67389767 -132240383 + AT_rich Low_complexity Low_complexity 1 42 0 267 150 150 0 chr5 67390178 67390238 -132239912 - MIR SINE MIR -10 252 184 236 268 0 0 chr5 67393230 67393286 -132236864 + (TG)n Simple_repeat Simple_repeat 1 56 0 24 32 0 0 chr5 67394395 67394426 -132235724 + AT_rich Low_complexity Low_complexity 1 31 0 1746 197 0 10 chr5 67394522 67394816 -132235334 - AluJo SINE Alu -20 292 2 21 71 0 0 chr5 67395018 67395060 -132235090 + AT_rich Low_complexity Low_complexity 1 42 0 189 74 0 0 chr5 67396144 67396171 -132233979 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 2243 131 0 0 chr5 67396180 67396492 -132233658 - AluSx SINE Alu 0 312 1 2099 122 17 0 chr5 67397092 67397386 -132232764 - AluSx SINE Alu -13 299 1 13145 123 55 16 chr5 67397391 67398931 -132231219 + Tigger1 DNA MER2_type 24 1687 -731 1950 152 10 3 chr5 67398931 67399240 -132230910 + AluSx SINE Alu 1 311 -1 13145 123 55 16 chr5 67399240 67400003 -132230147 + Tigger1 DNA MER2_type 1687 2418 0 2658 243 89 27 chr5 67400261 67400498 -132229652 - L1MC4a LINE L1 -2439 3707 3486 706 190 0 0 chr5 67400498 67400637 -132229513 - FLAM_A SINE Alu 0 139 1 2658 243 89 27 chr5 67400637 67401545 -132228605 - L1MC4a LINE L1 -2660 3486 2424 5978 81 13 33 chr5 67401545 67401951 -132228199 - L1MA3 LINE L1 0 6305 5892 2259 106 3 0 chr5 67401951 67402244 -132227906 - AluSx SINE Alu -18 294 1 5978 81 13 33 chr5 67402244 67402556 -132227594 - L1MA3 LINE L1 -413 5892 5575 2105 122 7 0 chr5 67402556 67402852 -132227298 - AluSx SINE Alu -3 309 12 5978 81 13 33 chr5 67402852 67403069 -132227081 - L1MA3 LINE L1 -730 5575 2450 1458 233 100 39 chr5 67403090 67403660 -132226490 - MLT1E2 LTR MaLR -64 590 1 225 0 0 0 chr5 67403773 67403798 -132226352 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 881 192 0 0 chr5 67403798 67403944 -132226206 - FRAM SINE Alu -32 144 1 675 289 141 29 chr5 67403949 67404333 -132225817 - L2 LINE L2 -963 2351 1925 20907 144 48 8 chr5 67404380 67408337 -132221813 - L1 LINE L1 -745 6820 3022 2332 91 3 0 chr5 67408337 67408634 -132221516 - AluY SINE Alu -13 298 1 20907 144 48 8 chr5 67408634 67408975 -132221175 - L1 LINE L1 -4543 3022 2696 2340 84 0 0 chr5 67408975 67409274 -132220876 - AluY SINE Alu -12 299 1 20907 144 48 8 chr5 67409274 67411519 -132218631 - L1 LINE L1 -4869 2696 13 1965 241 42 42 chr5 67411507 67411521 -132218629 - L1MEc LINE L1 -3627 2588 2575 * 1413 219 27 30 chr5 67411521 67411822 -132218328 - AluJo SINE Alu -12 300 1 1965 241 42 42 chr5 67411822 67412763 -132217387 - L1MEc LINE L1 -3640 2575 1667 2254 140 31 3 chr5 67412763 67413148 -132217002 - MER57A LTR ERV1 0 403 8 922 276 79 25 chr5 67413152 67413796 -132216354 - L1MEc LINE L1 -4728 1668 990 1708 240 82 53 chr5 67413839 67414572 -132215578 - L1MEc LINE L1 -5607 789 36 666 172 9 9 chr5 67414639 67414755 -132215395 - MER69 DNA AcHobo -1103 123 8 1443 94 0 5 chr5 67415179 67415392 -132214758 + L1MA1 LINE L1 6091 6302 0 22 0 0 0 chr5 67415393 67415415 -132214735 + AT_rich Low_complexity Low_complexity 1 22 0 593 314 58 0 chr5 67415781 67415953 -132214197 - MER91A DNA MER1_type 0 196 15 450 284 30 65 chr5 67416152 67416353 -132213797 - MIR3 SINE MIR -13 195 2 22 35 0 0 chr5 67416382 67416411 -132213739 + AT_rich Low_complexity Low_complexity 1 29 0 2142 183 29 11 chr5 67417036 67417478 -132212672 - MLT1C LTR MaLR -12 455 6 2048 166 28 14 chr5 67417701 67418057 -132212093 - MLT1A1 LTR MaLR -3 362 2 644 286 137 0 chr5 67418063 67418311 -132211839 - L2 LINE L2 -222 3091 2810 231 244 24 24 chr5 67418340 67418422 -132211728 + MER112 DNA MER1_type 2 83 -177 266 286 70 81 chr5 67418429 67418688 -132211462 - L2 LINE L2 -734 2580 2325 1686 184 65 27 chr5 67418718 67419119 -132211031 - MER21B LTR ERV1 -19 844 429 848 145 0 23 chr5 67419119 67419250 -132210900 + FLAM_C SINE Alu 6 133 -10 1448 234 86 18 chr5 67419272 67419668 -132210482 - MER21B LTR ERV1 -392 539 14 373 291 24 48 chr5 67421592 67421802 -132208348 + MLT1K LTR MaLR 378 582 -6 2197 125 0 7 chr5 67422482 67422786 -132207364 - AluSx SINE Alu -10 302 1 310 243 136 10 chr5 67423016 67423119 -132207031 + MIR SINE MIR 113 228 -34 2189 98 31 0 chr5 67423302 67423589 -132206561 + AluSc SINE Alu 1 296 -13 3237 232 60 24 chr5 67423740 67424886 -132205264 - L1MDa LINE L1 -4290 2250 1063 1608 173 3 43 chr5 67424907 67425207 -132204943 - AluJo SINE Alu -24 288 1 602 209 30 43 chr5 67425378 67425613 -132204537 + L1ME LINE L1 784 1015 -5055 255 255 211 31 chr5 67426426 67426587 -132203563 - L1ME4a LINE L1 -94 6027 5838 240 246 123 9 chr5 67426625 67426739 -132203411 - L1ME4a LINE L1 -25 6096 5970 269 29 0 0 chr5 67426815 67426849 -132203301 + HSMAR1 DNA Mariner 1 34 -1253 276 305 98 20 chr5 67426887 67426925 -132203225 - L1ME4a LINE L1 -310 5811 5777 2452 161 19 5 chr5 67426925 67427353 -132202797 + Tigger2a DNA MER2_type 1 434 0 276 305 98 20 chr5 67427353 67427560 -132202590 - L1ME4a LINE L1 -344 5777 5547 467 173 0 0 chr5 67427702 67427777 -132202373 - Tigger7 DNA MER2_type -1 2486 2412 3103 199 5 2 chr5 67427777 67428369 -132201781 - Tigger7 DNA MER2_type -138 595 2 386 216 40 32 chr5 67428542 67428667 -132201483 + L1ME3A LINE L1 5901 6026 -144 5460 61 0 3 chr5 67428737 67429429 -132200721 - L1PA7 LINE L1 -4 6150 5461 26643 99 12 52 chr5 67429429 67435284 -132194866 - L1P2 LINE L1 -582 5572 12 22 0 0 0 chr5 67435303 67435325 -132194825 + AT_rich Low_complexity Low_complexity 1 22 0 207 139 0 0 chr5 67435379 67435415 -132194735 + (TATATG)n Simple_repeat Simple_repeat 4 39 0 299 216 0 14 chr5 67435417 67435491 -132194659 - L1ME4a LINE L1 -1 6120 6048 425 218 129 41 chr5 67435685 67435832 -132194318 + MLT1J2 LTR MaLR 207 366 -84 264 218 18 0 chr5 67435872 67435927 -132194223 - L1ME4a LINE L1 -107 6014 5959 287 301 11 0 chr5 67435947 67436040 -132194110 - L1ME4a LINE L1 -506 5615 5522 1029 263 146 31 chr5 67436495 67436651 -132193499 - L2 LINE L2 0 3313 3176 2516 120 94 8 chr5 67436651 67437043 -132193107 - MSTB LTR MaLR 0 426 1 1029 263 146 31 chr5 67437043 67437623 -132192527 - L2 LINE L2 -137 3176 2479 200 255 94 66 chr5 67437632 67437738 -132192412 + L2 LINE L2 2672 2780 -534 409 133 0 0 chr5 67437814 67437874 -132192276 - U2 snRNA snRNA -128 60 1 203 349 67 70 chr5 67437926 67437999 -132192151 + L2 LINE L2 2990 3062 -210 1585 205 150 35 chr5 67437999 67438452 -132191698 - MLT1D LTR MaLR 0 505 1 203 349 67 70 chr5 67438452 67438662 -132191488 + L2 LINE L2 3062 3272 0 1976 246 106 52 chr5 67440523 67440760 -132189390 - L1ME3A LINE L1 -17 6153 5930 2528 162 23 21 chr5 67440760 67441193 -132188957 - Tigger2a DNA MER2_type 0 434 1 1976 246 106 52 chr5 67441193 67441331 -132188819 - L1ME3A LINE L1 -240 5930 5801 1671 154 173 6 chr5 67441331 67441643 -132188507 + MER47A DNA MER2_type 1 364 -2 1976 246 106 52 chr5 67441643 67441687 -132188463 - L1ME3A LINE L1 -369 5801 5761 2108 128 0 0 chr5 67441687 67441976 -132188174 + AluSx SINE Alu 5 293 -19 1976 246 106 52 chr5 67441976 67442331 -132187819 - L1ME3A LINE L1 -409 5761 5335 231 247 0 25 chr5 67442361 67442442 -132187708 + (TA)n Simple_repeat Simple_repeat 2 80 0 964 236 113 4 chr5 67442484 67442759 -132187391 + MLT1H LTR MaLR 9 313 -236 232 200 0 0 chr5 67442820 67442865 -132187285 - L1ME4a LINE L1 -691 5430 5386 28 61 0 0 chr5 67443019 67443068 -132187082 + AT_rich Low_complexity Low_complexity 1 49 0 613 186 0 0 chr5 67443072 67443174 -132186976 - U13 snRNA snRNA -2 102 1 470 301 36 44 chr5 67443392 67443641 -132186509 - MLT1L LTR MaLR -1 614 368 455 288 24 16 chr5 67444020 67444145 -132186005 + MIR SINE MIR 26 151 -111 194 167 0 0 chr5 67444152 67444182 -132185968 + L2 LINE L2 3265 3294 -19 228 111 0 0 chr5 67444666 67444702 -132185448 + (TG)n Simple_repeat Simple_repeat 1 36 0 523 219 77 55 chr5 67445198 67445381 -132184769 + MIR SINE MIR 46 232 -30 501 213 181 0 chr5 67446550 67446705 -132183445 - MER5A DNA MER1_type 0 189 7 515 261 168 0 chr5 67446717 67446878 -132183272 + MER5A DNA MER1_type 2 189 0 207 0 0 0 chr5 67447075 67447098 -132183052 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1866 137 0 30 chr5 67447302 67447602 -132182548 - AluJo SINE Alu -21 291 1 2217 85 24 7 chr5 67447637 67447931 -132182219 + AluSq SINE Alu 1 299 -14 2328 222 122 35 chr5 67448036 67448748 -132181402 + MER21B LTR ERV1 29 802 -61 2004 108 0 4 chr5 67448770 67449039 -132181111 + AluSx SINE Alu 33 300 -12 430 313 88 0 chr5 67450278 67450460 -132179690 - MIR SINE MIR -17 245 48 1050 198 25 10 chr5 67450575 67450777 -132179373 + MER58A DNA MER1_type 1 205 -19 200 308 0 0 chr5 67450978 67451030 -132179120 + MIR SINE MIR 59 110 -152 1583 260 66 64 chr5 67451063 67451695 -132178455 - L2 LINE L2 -5 3308 2675 2217 115 3 6 chr5 67451695 67452008 -132178142 - AluSx SINE Alu 0 312 1 1583 260 66 64 chr5 67452008 67452368 -132177782 - L2 LINE L2 -638 2675 2317 1610 238 174 49 chr5 67452374 67452906 -132177244 - L2 LINE L2 -2429 885 230 2117 131 7 0 chr5 67452906 67453211 -132176939 - AluSq SINE Alu -6 307 1 1610 238 174 49 chr5 67453211 67453433 -132176717 - L2 LINE L2 -3084 230 37 235 350 19 10 chr5 67453956 67454059 -132176091 + MIR SINE MIR 143 246 -16 569 298 32 52 chr5 67456295 67456547 -132173603 + L2 LINE L2 2917 3163 -109 253 299 0 0 chr5 67456578 67456655 -132173495 - L1 LINE L1 -1127 5019 4943 378 261 65 29 chr5 67456723 67456861 -132173289 - L2 LINE L2 -6 3307 3165 453 162 14 0 chr5 67456865 67456939 -132173211 - MER116 DNA Mariner -5 75 1 2437 148 40 51 chr5 67457742 67458195 -132171955 - MLT1C LTR MaLR 0 467 20 189 409 16 16 chr5 67458604 67458790 -132171360 - L2 LINE L2 -566 2748 2563 * 564 259 31 31 chr5 67458774 67458936 -132171214 + MER5B DNA MER1_type 15 176 -2 637 281 83 4 chr5 67459497 67459725 -132170425 - MIR SINE MIR -16 246 1 2714 188 110 33 chr5 67459831 67460306 -132169844 + MER63C DNA MER1_type 255 791 -269 2918 62 6 6 chr5 67460306 67460662 -132169488 - L1PA8 LINE L1 -14 6158 5803 2714 188 110 33 chr5 67460662 67460814 -132169336 + MER63C DNA MER1_type 791 930 0 8112 111 34 15 chr5 67460958 67462164 -132167986 - Tigger3b DNA MER2_type 0 1231 3 2205 96 7 0 chr5 67462300 67462593 -132167557 - AluSx SINE Alu -17 295 1 283 119 90 75 chr5 67464170 67464237 -132165913 - L2 LINE L2 0 3313 3246 216 97 0 0 chr5 67464277 67464308 -132165842 + (TAA)n Simple_repeat Simple_repeat 1 31 0 396 215 43 11 chr5 67464353 67464446 -132165704 - MIR SINE MIR -95 167 72 316 248 89 57 chr5 67465780 67465937 -132164213 - MIR SINE MIR -50 212 51 1714 161 10 20 chr5 67465975 67466267 -132163883 - AluJb SINE Alu -23 289 1 507 230 34 34 chr5 67466740 67466918 -132163232 - L1MC5 LINE L1 -35 7926 7749 1866 197 111 2 chr5 67466919 67467335 -132162815 - MLT1C LTR MaLR 0 467 7 581 247 190 23 chr5 67467346 67467646 -132162504 - L1MC5 LINE L1 -225 7736 7387 2383 121 98 20 chr5 67467666 67468063 -132162087 + MSTA LTR MaLR 1 428 0 2117 131 0 0 chr5 67468080 67468370 -132161780 + AluSx SINE Alu 2 291 -21 1311 189 31 100 chr5 67468373 67468732 -132161418 - L1MC5 LINE L1 -1004 6957 6624 9615 31 0 29 chr5 67468764 67470663 -132159487 - L1PA3 LINE L1 -3 6152 4276 1562 11 0 0 chr5 67470663 67470837 -132159313 + L1P LINE L1 3951 4124 -2022 36330 62 16 10 chr5 67470937 67475528 -132154622 - L1P LINE L1 -1519 4627 8 2030 121 3 27 chr5 67475555 67475852 -132154298 + AluSx SINE Alu 2 291 -21 320 280 38 89 chr5 67475862 67476248 -132153902 - L1MC4 LINE L1 -1190 6618 6264 312 303 48 42 chr5 67476395 67476560 -132153590 + L1ME4a LINE L1 5764 5929 -192 24 32 0 0 chr5 67476964 67476995 -132153155 + AT_rich Low_complexity Low_complexity 1 31 0 311 288 57 92 chr5 67477474 67477755 -132152395 - HAL1b LINE L1 -768 580 310 481 197 126 24 chr5 67527841 67527968 -132102182 - MER6B DNA MER2_type -70 140 1 292 281 141 8 chr5 67528370 67528491 -132101659 - MIR SINE MIR -77 185 49 1850 176 39 0 chr5 67528703 67529033 -132101117 - MER2 DNA MER2_type -1 343 1 3368 122 80 42 chr5 67529869 67530510 -132099640 - L1MA8 LINE L1 -108 6183 5519 25 0 0 0 chr5 67530592 67530617 -132099533 + AT_rich Low_complexity Low_complexity 1 25 0 453 81 0 0 chr5 67530796 67530858 -132099292 + (TCCTG)n Simple_repeat Simple_repeat 2 63 0 2029 102 50 3 chr5 67530858 67531136 -132099014 - AluSc SINE Alu -18 291 1 2126 92 9 41 chr5 67531282 67531597 -132098553 - AluSx SINE Alu -7 305 1 1616 204 0 26 chr5 67531818 67532126 -132098024 - AluJb SINE Alu -12 300 1 212 186 47 0 chr5 67532591 67532634 -132097516 - L2 LINE L2 -4 3268 3224 1573 188 7 7 chr5 67532807 67533089 -132097061 + AluJo SINE Alu 1 282 -30 574 239 0 43 chr5 67533125 67533263 -132096887 - FLAM_A SINE Alu -1 132 1 280 394 21 16 chr5 67533290 67533483 -132096667 - L2 LINE L2 -339 2975 2782 342 241 58 115 chr5 67533498 67533624 -132096526 + MER117 DNA MER1_type 1 116 -81 458 258 15 15 chr5 67533624 67533756 -132096394 + MER94 DNA DNA 3 134 0 342 241 58 115 chr5 67533756 67533803 -132096347 + MER117 DNA MER1_type 116 164 -33 641 320 52 47 chr5 67533824 67534268 -132095882 - L2 LINE L2 -559 2755 2310 302 320 161 48 chr5 67534619 67535053 -132095097 - L2 LINE L2 -1176 2138 1656 2233 97 0 23 chr5 67535084 67535392 -132094758 + AluSx SINE Alu 1 301 -11 1987 121 11 0 chr5 67535555 67535835 -132094315 - AluSx SINE Alu -19 293 11 556 335 143 17 chr5 67536301 67536820 -132093330 + L2 LINE L2 2028 2611 -703 690 198 176 13 chr5 67536821 67537059 -132093091 + MER33 DNA MER1_type 1 277 -47 1633 183 23 23 chr5 67537072 67537373 -132092777 + AluJo SINE Alu 3 303 -9 207 314 70 96 chr5 67537436 67537592 -132092558 + L2 LINE L2 2610 2761 -553 337 313 52 113 chr5 67537675 67538020 -132092130 + L2 LINE L2 2947 3270 -2 614 154 41 8 chr5 67538199 67538322 -132091828 - L1MB7 LINE L1 -11 6173 6047 186 43 0 0 chr5 67540285 67540308 -132089842 + (TG)n Simple_repeat Simple_repeat 2 24 0 257 234 31 0 chr5 67540475 67540539 -132089611 + MIR SINE MIR 88 153 -109 245 174 22 0 chr5 67540570 67540616 -132089534 + Tigger4(Zombi) DNA MER2_type 2684 2730 -1 281 250 48 36 chr5 67541357 67541441 -132088709 - MIR SINE MIR -32 230 146 301 164 131 0 chr5 67541444 67541505 -132088645 + MER58 DNA MER1_type 2350 2418 -2 767 189 75 44 chr5 67543057 67543285 -132086865 - MER46A DNA MER2_type 0 236 2 352 216 14 14 chr5 67545088 67545162 -132084988 + Tigger3(Golem) DNA MER2_type 1 74 -2955 2175 102 0 3 chr5 67545164 67545459 -132084691 + AluSx SINE Alu 1 294 -18 589 208 23 0 chr5 67545477 67545607 -132084543 + AluJb SINE Alu 1 133 -179 1694 173 0 13 chr5 67545615 67545915 -132084235 + AluJo SINE Alu 1 296 -16 316 136 0 0 chr5 67545917 67545961 -132084189 + Tigger3(Golem) DNA MER2_type 70 113 -2916 1056 129 9 227 chr5 67545965 67546291 -132083859 + Tigger3(Golem) DNA MER2_type 2784 3038 0 2389 194 13 13 chr5 67547625 67548150 -132082000 - L1MB7 LINE L1 0 6184 5660 276 146 0 0 chr5 67548182 67548223 -132081927 + L1M4 LINE L1 5525 5565 -613 231 264 0 0 chr5 67548255 67548308 -132081842 + MER3 DNA MER1_type 38 90 -119 * 241 245 0 0 chr5 67548265 67548314 -132081836 - Charlie5 DNA MER1_type -2403 209 161 246 350 43 21 chr5 67548872 67549012 -132081138 - L2 LINE L2 -444 2870 2728 28 48 0 0 chr5 67549282 67549324 -132080826 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr5 67549503 67549535 -132080615 + AT_rich Low_complexity Low_complexity 1 32 0 307 301 168 25 chr5 67549673 67549869 -132080281 + MIR SINE MIR 19 242 -20 1908 150 0 10 chr5 67551521 67551821 -132078329 + AluJb SINE Alu 1 297 -15 1553 190 35 3 chr5 67551837 67552127 -132078023 + AluJb SINE Alu 1 299 -13 21 0 0 0 chr5 67552407 67552428 -132077722 + AT_rich Low_complexity Low_complexity 1 21 0 291 335 106 39 chr5 67555949 67556337 -132073813 - L2 LINE L2 -561 2753 2340 28 71 0 0 chr5 67556990 67557046 -132073104 + AT_rich Low_complexity Low_complexity 1 56 0 635 286 54 20 chr5 67557076 67557279 -132072871 + MIR SINE MIR 53 262 0 31 58 0 0 chr5 67557387 67557439 -132072711 + AT_rich Low_complexity Low_complexity 1 52 0 43552 40 5 2 chr5 67557466 67563598 -132066552 - L1PA4 LINE L1 -3 6152 3 402 249 58 67 chr5 67564250 67564449 -132065701 - MIR SINE MIR -1 261 66 864 133 0 16 chr5 67564783 67564911 -132065239 - FLAM_C SINE Alu -17 126 1 621 0 0 0 chr5 67565502 67565571 -132064579 + (TG)n Simple_repeat Simple_repeat 2 70 0 290 304 22 0 chr5 67565603 67565695 -132064455 - MIR SINE MIR -110 152 59 186 71 0 0 chr5 67566427 67566455 -132063695 + (A)n Simple_repeat Simple_repeat 1 28 0 831 164 0 0 chr5 67567690 67567824 -132062326 + AluJo SINE Alu 87 220 -92 284 102 61 20 chr5 67567824 67567873 -132062277 + AluJo SINE Alu 86 136 -166 1138 210 112 4 chr5 67567956 67568079 -132062071 + AluJo SINE Alu 1 109 -193 219 69 0 0 chr5 67568079 67568108 -132062042 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1138 210 112 4 chr5 67568108 67568251 -132061899 + AluJo SINE Alu 109 296 -6 2217 85 7 0 chr5 67569930 67570251 -132059899 - AluSq SINE Alu 0 323 1 22 0 0 0 chr5 67570954 67570976 -132059174 + AT_rich Low_complexity Low_complexity 1 22 0 1528 169 3 54 chr5 67570980 67571275 -132058875 + AluJb SINE Alu 1 280 -32 207 0 0 0 chr5 67571278 67571301 -132058849 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr5 67571627 67571651 -132058499 + AT_rich Low_complexity Low_complexity 1 24 0 1766 161 0 35 chr5 67573788 67574098 -132056052 - AluJo SINE Alu -13 299 1 22 56 0 0 chr5 67576858 67576894 -132053256 + AT_rich Low_complexity Low_complexity 1 36 0 1034 40 0 0 chr5 67576951 67577076 -132053074 + AluY SINE Alu 175 299 -12 320 290 0 14 chr5 67577419 67577488 -132052662 + MIR SINE MIR 12 79 -183 279 287 35 0 chr5 67577511 67577626 -132052524 - L1MC4 LINE L1 -2 8040 7922 447 87 0 0 chr5 67577666 67577735 -132052415 + (CA)n Simple_repeat Simple_repeat 2 70 0 496 299 43 12 chr5 67577776 67577940 -132052210 + MIR SINE MIR 84 252 -10 481 288 28 34 chr5 67578090 67578267 -132051883 - MER5B DNA MER1_type -1 177 2 24 32 0 0 chr5 67579335 67579366 -132050784 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 67580897 67580926 -132049224 + AT_rich Low_complexity Low_complexity 1 29 0 2625 49 0 0 chr5 67582956 67583262 -132046888 - AluY SINE Alu -5 306 1 1850 179 7 0 chr5 67584040 67584342 -132045808 + AluJb SINE Alu 1 304 -8 244 213 33 0 chr5 67584473 67584534 -132045616 + HAL1 LINE L1 1611 1673 -834 750 192 17 0 chr5 67584732 67584852 -132045298 - FLAM_C SINE Alu -19 124 3 2326 117 0 0 chr5 67584865 67585173 -132044977 - AluSp SINE Alu -5 308 1 512 350 33 28 chr5 67585338 67585701 -132044449 - L1ME LINE L1 -392 5770 5406 2160 136 0 16 chr5 67585833 67586150 -132044000 - AluSx SINE Alu 0 312 1 238 279 88 81 chr5 67586193 67586476 -132043674 - L1ME LINE L1 -913 5233 4949 566 268 119 6 chr5 67586770 67586938 -132043212 - MER5A DNA MER1_type 0 189 3 4370 260 48 29 chr5 67587025 67588771 -132041379 + L1MEc LINE L1 73 1851 -4545 2493 215 55 20 chr5 67588788 67589554 -132040596 + L1MEc LINE L1 1512 2304 -4092 1748 147 95 0 chr5 67589575 67589860 -132040290 + AluSx SINE Alu 1 312 0 2077 232 62 6 chr5 67589915 67590558 -132039592 - L1ME LINE L1 -1158 4988 4310 1605 139 171 7 chr5 67590559 67590868 -132039282 - MER47A DNA MER2_type 0 366 7 1164 236 147 30 chr5 67590870 67591408 -132038742 - L1ME LINE L1 -1832 4314 3714 2100 249 21 14 chr5 67591416 67591931 -132038219 + LTR40a LTR ERVL 1 519 0 265 255 59 20 chr5 67591933 67592035 -132038115 + HERVL40 LTR ERVL 1 106 -5424 1486 248 28 45 chr5 67592188 67592696 -132037454 + HERVL40 LTR ERVL 2124 2622 -2908 486 185 185 49 chr5 67592733 67592895 -132037255 + HERVL40 LTR ERVL 2686 2869 -2661 538 338 51 11 chr5 67593310 67593680 -132036470 + MER89-int LTR ERV1 6118 6502 -299 454 316 37 5 chr5 67593560 67593750 -132036400 + HERVL40 LTR ERVL 2783 2978 -59 * 1633 185 7 3 chr5 67593989 67594281 -132035869 - AluJb SINE Alu -19 293 1 443 273 86 30 chr5 67594413 67594611 -132035539 + L1MEc LINE L1 2279 2487 -3728 2252 97 7 7 chr5 67594641 67594940 -132035210 - AluSx SINE Alu -13 299 1 544 318 7 0 chr5 67594947 67595095 -132035055 - L2 LINE L2 -243 3070 2922 2272 106 0 13 chr5 67595400 67595701 -132034449 - AluSq SINE Alu -16 297 1 874 165 0 0 chr5 67595949 67596082 -132034068 + FLAM_C SINE Alu 1 133 0 28 48 0 0 chr5 67596170 67596212 -132033938 + AT_rich Low_complexity Low_complexity 1 42 0 403 377 20 10 chr5 67596623 67596822 -132033328 + MIR SINE MIR 2 202 -60 23 33 0 0 chr5 67596883 67596913 -132033237 + AT_rich Low_complexity Low_complexity 1 30 0 2269 129 0 0 chr5 67596913 67597222 -132032928 + AluSx SINE Alu 1 309 -3 370 300 65 99 chr5 67597601 67598004 -132032146 + L1MEc LINE L1 3451 3839 -2376 1828 196 54 50 chr5 67598005 67598506 -132031644 + MLT1D LTR MaLR 1 503 -2 1376 234 16 7 chr5 67598511 67598819 -132031331 + ERVL LTR ERVL 4296 4606 -1158 1895 235 38 33 chr5 67598822 67600068 -132030082 + L1M4c LINE L1 1276 2690 -3873 31 44 0 0 chr5 67600102 67600147 -132030003 + AT_rich Low_complexity Low_complexity 1 45 0 274 222 28 0 chr5 67600153 67600225 -132029925 + L1M4c LINE L1 2676 2749 -3633 7264 138 30 23 chr5 67600240 67601878 -132028272 + L1MB2 LINE L1 6 1893 -4970 2064 110 38 3 chr5 67601878 67602169 -132027981 + AluSc SINE Alu 1 301 -8 7264 138 30 23 chr5 67602169 67603046 -132027104 + L1MB2 LINE L1 1893 2763 -4100 5450 206 27 11 chr5 67603073 67604000 -132026150 + L1 LINE L1 3011 3967 -2895 2397 82 3 10 chr5 67604000 67604306 -132025844 + AluY SINE Alu 1 304 -7 5450 206 27 11 chr5 67604306 67604768 -132025382 + L1 LINE L1 3967 4421 -2441 2585 224 69 1 chr5 67604784 67605553 -132024597 + L1MB2 LINE L1 3744 4564 -2298 2205 100 10 17 chr5 67605556 67605855 -132024295 + AluSq SINE Alu 1 297 -16 36995 74 12 8 chr5 67605865 67611984 -132018166 + L1PA6 LINE L1 11 6152 -2 5209 180 59 35 chr5 67611997 67613260 -132016890 + L1MB2 LINE L1 4570 5802 -1085 666 173 7 65 chr5 67613260 67613399 -132016751 + FLAM_C SINE Alu 1 131 -2 5209 180 59 35 chr5 67613399 67613564 -132016586 + L1MB2 LINE L1 5802 5962 -925 1480 153 61 58 chr5 67613564 67613859 -132016291 + AluJo SINE Alu 1 296 -16 5209 180 59 35 chr5 67613859 67614679 -132015471 + L1MB2 LINE L1 5962 6887 0 505 340 35 10 chr5 67614687 67614884 -132015266 - L3 LINE CR1 -737 840 639 538 222 44 52 chr5 67615205 67615340 -132014810 + MIR SINE MIR 39 172 -90 2309 112 0 0 chr5 67615407 67615710 -132014440 - AluSg SINE Alu -7 303 1 1396 199 108 9 chr5 67615823 67616166 -132013984 + MLT1E1 LTR MaLR 268 504 -1 199 304 134 73 chr5 67616502 67616815 -132013335 - L2 LINE L2 -591 2723 2392 209 342 0 0 chr5 67616844 67616920 -132013230 - L2 LINE L2 -1020 2294 2219 2125 122 7 0 chr5 67617169 67617464 -132012686 - AluSx SINE Alu -15 297 1 318 261 43 58 chr5 67617511 67617649 -132012501 - L2 LINE L2 -456 2858 2723 2215 86 0 51 chr5 67617749 67618064 -132012086 + AluSc SINE Alu 1 299 -10 39 74 0 0 chr5 67618762 67618843 -132011307 + AT_rich Low_complexity Low_complexity 1 81 0 397 282 51 60 chr5 67619211 67619427 -132010723 + L1ME4a LINE L1 5694 5907 -214 803 216 28 0 chr5 67620548 67620724 -132009426 + MER3 DNA MER1_type 2 182 -27 207 0 0 0 chr5 67620868 67620891 -132009259 + (T)n Simple_repeat Simple_repeat 1 23 0 362 336 52 0 chr5 67620918 67621034 -132009116 - L2 LINE L2 -10 3303 3182 2025 179 62 31 chr5 67621242 67621443 -132008707 + MLT1C LTR MaLR 1 194 -273 270 56 0 0 chr5 67621443 67621479 -132008671 + (CA)n Simple_repeat Simple_repeat 1 36 0 2025 179 62 31 chr5 67621479 67621730 -132008420 + MLT1C LTR MaLR 194 467 0 2330 96 0 13 chr5 67621872 67622184 -132007966 - AluSx SINE Alu -2 310 3 435 305 146 43 chr5 67622958 67623424 -132006726 - L2 LINE L2 -902 2412 1899 346 243 26 127 chr5 67623477 67623563 -132006587 + L1MEd LINE L1 418 476 -6054 2152 113 0 10 chr5 67623563 67623863 -132006287 + AluSg1 SINE Alu 1 297 -12 346 243 26 127 chr5 67623863 67623965 -132006185 + L1MEd LINE L1 476 587 -5943 456 306 108 14 chr5 67623987 67624412 -132005738 + L1MEd LINE L1 1564 2028 -4512 309 378 93 10 chr5 67624561 67624754 -132005396 + L1MEd LINE L1 661 869 -5661 1732 105 67 46 chr5 67624760 67625045 -132005105 + AluSx SINE Alu 1 291 -21 308 241 32 76 chr5 67625260 67625418 -132004732 + L1ME LINE L1 43 193 -5877 423 296 78 29 chr5 67625795 67626038 -132004112 + L1ME LINE L1 227 481 -5589 265 250 60 30 chr5 67626131 67626337 -132003813 + L1ME LINE L1 466 680 -5403 * 467 214 0 0 chr5 67626334 67626432 -132003718 + L1M4 LINE L1 3758 3855 -2291 1730 175 16 16 chr5 67626432 67626735 -132003415 + AluJo SINE Alu 1 303 -9 1502 235 36 46 chr5 67626742 67626906 -132003244 + L1ME1 LINE L1 5649 5813 -353 2248 116 3 0 chr5 67626906 67627209 -132002941 - AluSx SINE Alu -8 304 1 1502 235 36 46 chr5 67627209 67627547 -132002603 + L1ME1 LINE L1 5813 6146 -20 418 232 8 16 chr5 67627597 67627722 -132002428 + L1MC5 LINE L1 7790 7913 -48 1009 214 18 67 chr5 67627739 67627829 -132002321 + L1M4 LINE L1 3999 4092 -2054 2278 106 0 0 chr5 67627829 67628130 -132002020 + AluSx SINE Alu 1 301 -11 1009 214 18 67 chr5 67628130 67628381 -132001769 + L1M4 LINE L1 4092 4323 -1823 545 193 36 14 chr5 67628393 67628533 -132001617 + L1 LINE L1 3461 3603 -2543 551 224 7 7 chr5 67628550 67628693 -132001457 + L1 LINE L1 3685 3827 -2319 * 598 235 0 0 chr5 67628684 67628820 -132001330 + L1ME1 LINE L1 5842 5977 -189 511 227 0 16 chr5 67628818 67628946 -132001204 + L1 LINE L1 3831 3956 -2190 * 2239 113 3 0 chr5 67629765 67630066 -132000084 + AluSc SINE Alu 1 302 -7 424 245 170 40 chr5 67630156 67630356 -131999794 + L1MEc LINE L1 1334 1559 -4837 550 292 55 4 chr5 67630394 67630701 -131999449 - L1MCa LINE L1 -4701 1906 1399 308 138 5 23 chr5 67630811 67630879 -131999271 + Alu SINE Alu 1 47 -255 2110 91 0 11 chr5 67630879 67631154 -131998996 + AluSq SINE Alu 21 292 -21 432 116 14 0 chr5 67631434 67631503 -131998647 + AluSp SINE Alu 62 131 -182 1451 74 6 0 chr5 67631521 67631697 -131998453 + AluSp SINE Alu 118 294 -19 244 228 51 13 chr5 67632079 67632158 -131997992 - LTR67 LTR ERVL -50 507 426 782 147 0 22 chr5 67632528 67632710 -131997440 + FLAM_C SINE Alu 1 179 0 331 189 40 0 chr5 67632817 67632891 -131997259 + L1ME LINE L1 5587 5663 -503 357 274 20 0 chr5 67632928 67633030 -131997120 + L1ME3 LINE L1 5526 5629 -535 * 628 238 44 0 chr5 67633021 67633230 -131996920 + L1ME3 LINE L1 5837 6071 -91 2363 102 0 0 chr5 67633242 67633545 -131996605 + AluSq SINE Alu 1 303 -10 919 109 0 31 chr5 67633558 67633686 -131996464 + AluSq/x SINE Alu 1 124 -189 357 267 0 0 chr5 67633686 67633791 -131996359 + (TA)n Simple_repeat Simple_repeat 1 105 0 315 315 0 0 chr5 67633792 67633881 -131996269 + L1MC4 LINE L1 6615 6703 -1339 237 211 0 0 chr5 67633882 67633934 -131996216 + (TATG)n Simple_repeat Simple_repeat 3 54 0 * 570 182 0 0 chr5 67633933 67634043 -131996107 + (CA)n Simple_repeat Simple_repeat 2 111 0 326 335 39 7 chr5 67634135 67634290 -131995860 + L1ME1 LINE L1 716 875 -5667 963 219 67 71 chr5 67634392 67634689 -131995461 + LTR41 LTR ERVL 6 301 -472 1380 223 170 22 chr5 67634694 67635135 -131995015 + L1ME1 LINE L1 3094 3468 -3176 2198 113 0 0 chr5 67635135 67635436 -131994714 + AluSx SINE Alu 1 301 -11 1380 223 170 22 chr5 67635436 67635593 -131994557 + L1ME1 LINE L1 3468 3600 -3044 1624 162 8 11 chr5 67635593 67635859 -131994291 + AluJo SINE Alu 37 301 -11 1380 223 170 22 chr5 67635859 67635940 -131994210 + L1ME1 LINE L1 3600 3875 -2769 237 216 59 0 chr5 67635974 67636025 -131994125 + L1ME1 LINE L1 4263 4316 -2328 1481 210 38 38 chr5 67636046 67636437 -131993713 + L1ME1 LINE L1 4414 4804 -1840 1080 96 30 6 chr5 67636434 67636600 -131993550 + THE1-int LTR MaLR 17 186 -1394 * 1690 105 98 4 chr5 67636585 67636861 -131993289 - THE1C-int LTR MaLR -1278 302 1 1899 141 54 35 chr5 67636861 67637229 -131992921 - THE1C LTR MaLR 0 375 1 2891 191 79 53 chr5 67637229 67638492 -131991658 + L1ME1 LINE L1 4801 6106 -576 1119 126 6 23 chr5 67638492 67638667 -131991483 + AluJb SINE Alu 137 308 -4 1635 189 71 14 chr5 67638669 67639035 -131991115 + L1ME1 LINE L1 6101 6487 -177 335 184 0 15 chr5 67640355 67640422 -131989728 + FLAM SINE Alu 73 133 0 920 185 28 0 chr5 67640849 67641027 -131989123 + MER5A DNA MER1_type 1 183 -6 329 313 94 98 chr5 67641207 67641372 -131988778 + L2 LINE L2 2553 2717 -555 1745 148 0 40 chr5 67641372 67641670 -131988480 - AluJo SINE Alu -20 292 7 329 313 94 98 chr5 67641670 67642048 -131988102 + L2 LINE L2 2717 3089 -183 2234 183 111 60 chr5 67642084 67642411 -131987739 - Charlie1a DNA MER1_type -1312 1449 1140 1135 132 38 9 chr5 67642411 67642624 -131987526 - L1PA14 LINE L1 0 6161 5943 2234 183 111 60 chr5 67642624 67643083 -131987067 - Charlie1a DNA MER1_type -1621 1140 623 1539 206 69 39 chr5 67643075 67643508 -131986642 - Charlie1a DNA MER1_type -1009 446 1 * 260 250 153 48 chr5 67643523 67643647 -131986503 + L2 LINE L2 3177 3313 0 276 243 14 0 chr5 67645529 67645603 -131984547 - L1MC4 LINE L1 0 8042 7968 213 180 0 33 chr5 67645862 67645923 -131984227 + (TA)n Simple_repeat Simple_repeat 1 59 0 258 220 0 0 chr5 67645923 67645973 -131984177 - L1MC4 LINE L1 -544 7498 7449 768 181 0 8 chr5 67646847 67646974 -131983176 + FLAM_A SINE Alu 1 126 -7 705 238 100 0 chr5 67647276 67647486 -131982664 - L1ME3A LINE L1 -5 6165 5935 29 28 0 0 chr5 67648511 67648547 -131981603 + AT_rich Low_complexity Low_complexity 1 36 0 703 185 0 0 chr5 67648552 67648671 -131981479 - AluJb SINE Alu -193 119 1 326 173 0 0 chr5 67648745 67648797 -131981353 - FLAM SINE Alu -21 112 61 2207 114 10 3 chr5 67648981 67649289 -131980861 + AluSg SINE Alu 1 310 0 242 311 81 47 chr5 67650189 67650337 -131979813 - L2 LINE L2 -191 3081 2929 398 327 89 27 chr5 67650437 67650694 -131979456 - L2 LINE L2 -586 2728 2456 2220 117 0 0 chr5 67650751 67651050 -131979100 - AluSx SINE Alu -13 299 1 848 285 76 21 chr5 67651074 67651362 -131978788 - MLT1I LTR MaLR -105 304 1 251 326 128 20 chr5 67651366 67651562 -131978588 - L2 LINE L2 -854 2460 2244 2606 41 0 22 chr5 67651744 67652060 -131978090 - AluY SINE Alu -1 310 2 255 103 0 0 chr5 67656231 67656270 -131973880 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 21 36 0 0 chr5 67658082 67658110 -131972040 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 67659094 67659116 -131971034 + AT_rich Low_complexity Low_complexity 1 22 0 2220 79 14 0 chr5 67659828 67660118 -131970032 + AluY SINE Alu 1 294 -17 803 254 33 21 chr5 67660441 67660681 -131969469 - L2 LINE L2 -399 2915 2673 227 143 122 0 chr5 67661084 67661133 -131969017 + MIR SINE MIR 145 199 -63 2716 218 59 18 chr5 67661217 67661842 -131968308 - MER82 DNA MER2_type 0 653 3 456 288 16 16 chr5 67663941 67664066 -131966084 - MIR3 SINE MIR -10 198 74 27 62 0 0 chr5 67664894 67664942 -131965208 + AT_rich Low_complexity Low_complexity 1 48 0 1669 157 8 0 chr5 67666475 67666730 -131963420 - AluJb SINE Alu -38 274 18 23 0 0 0 chr5 67668056 67668079 -131962071 + AT_rich Low_complexity Low_complexity 1 23 0 1846 140 3 47 chr5 67668336 67668657 -131961493 - AluSx SINE Alu -5 307 1 799 276 24 20 chr5 67668833 67669079 -131961071 - MIR SINE MIR -10 252 6 1052 178 29 62 chr5 67669256 67669497 -131960653 + MER46A DNA MER2_type 1 233 -3 213 237 0 0 chr5 67670593 67670652 -131959498 + GA-rich Low_complexity Low_complexity 5 63 0 183 283 0 0 chr5 67670715 67670814 -131959336 + GA-rich Low_complexity Low_complexity 1 99 0 478 240 27 34 chr5 67671765 67671911 -131958239 - MIR SINE MIR -1 261 117 2019 139 3 0 chr5 67672385 67672672 -131957478 - AluSx SINE Alu -24 288 1 2213 109 3 19 chr5 67672801 67673112 -131957038 - AluSx SINE Alu -6 306 1 23 68 0 0 chr5 67673237 67673281 -131956869 + AT_rich Low_complexity Low_complexity 1 44 0 419 330 70 15 chr5 67673325 67673525 -131956625 - MIR SINE MIR -3 259 49 22 88 0 0 chr5 67675057 67675114 -131955036 + AT_rich Low_complexity Low_complexity 1 57 0 850 296 77 29 chr5 67675282 67676301 -131953849 - L1MC4a LINE L1 -774 5441 4823 280 163 0 0 chr5 67676560 67676603 -131953547 - 5S rRNA rRNA -78 43 1 441 271 141 27 chr5 67676606 67676868 -131953282 - L1MC4a LINE L1 -1623 4592 4301 377 197 191 28 chr5 67677017 67677195 -131952955 - L1MC4a LINE L1 -1684 6124 5918 28 48 0 0 chr5 67677767 67677809 -131952341 + AT_rich Low_complexity Low_complexity 1 42 0 269 150 150 0 chr5 67678220 67678280 -131951870 - MIR SINE MIR -10 252 184 236 268 0 0 chr5 67681350 67681406 -131948744 + (TG)n Simple_repeat Simple_repeat 1 56 0 24 32 0 0 chr5 67682513 67682544 -131947606 + AT_rich Low_complexity Low_complexity 1 31 0 1716 197 0 10 chr5 67682640 67682934 -131947216 - AluJo SINE Alu -20 292 2 21 71 0 0 chr5 67683136 67683178 -131946972 + AT_rich Low_complexity Low_complexity 1 42 0 190 154 0 0 chr5 67684262 67684301 -131945849 + T-rich Low_complexity Low_complexity 1 180 0 2243 131 0 0 chr5 67684301 67684613 -131945537 - AluSx SINE Alu 0 351 1 2099 122 17 0 chr5 67685213 67685507 -131944643 - AluSx SINE Alu -13 299 1 13145 123 55 16 chr5 67685512 67687052 -131943098 + Tigger1 DNA MER2_type 24 1687 -731 1950 152 10 3 chr5 67687052 67687361 -131942789 + AluSx SINE Alu 1 311 -1 13145 123 55 16 chr5 67687361 67688124 -131942026 + Tigger1 DNA MER2_type 1687 2418 0 2601 241 93 27 chr5 67688382 67688619 -131941531 - L1MC4a LINE L1 -2439 3776 3556 706 190 0 0 chr5 67688619 67688758 -131941392 - FLAM_A SINE Alu 0 139 1 2601 241 93 27 chr5 67688758 67689663 -131940487 - L1MC4a LINE L1 -2659 3556 2558 2595 78 23 20 chr5 67689665 67690061 -131940089 - L1MA3 LINE L1 0 6305 5909 20074 54 3 2 chr5 67740069 67743455 -131886695 + L1PA4 LINE L1 2748 6147 -8 1454 121 29 64 chr5 67743479 67743759 -131886391 + AluSg SINE Alu 23 292 -18 335 273 95 25 chr5 67743961 67744303 -131885847 - L1MC4a LINE L1 -3819 2396 2078 23 0 0 0 chr5 67744494 67744517 -131885633 + AT_rich Low_complexity Low_complexity 1 23 0 3039 64 32 18 chr5 67744644 67745079 -131885071 + L1PB1 LINE L1 5711 6151 0 1837 160 7 10 chr5 67745202 67745496 -131884654 + AluJo SINE Alu 1 293 -19 650 303 37 37 chr5 67745518 67746206 -131883944 - L1MEd LINE L1 -838 1652 877 21 0 0 0 chr5 67746316 67746337 -131883813 + AT_rich Low_complexity Low_complexity 1 21 0 825 193 74 84 chr5 67746639 67746924 -131883226 - MLT1B LTR MaLR -108 282 1 281 372 8 8 chr5 67747574 67747703 -131882447 + L2 LINE L2 2936 3064 -208 317 306 96 55 chr5 67748101 67748326 -131881824 + LTR33A LTR ERVL 222 461 -62 610 101 0 10 chr5 67748326 67748425 -131881725 - L1MB2 LINE L1 0 6171 6074 317 306 96 55 chr5 67748425 67748470 -131881680 + LTR33A LTR ERVL 461 503 -20 5716 148 15 13 chr5 67748511 67750048 -131880102 + L1PB1 LINE L1 4268 5812 -339 456 19 0 0 chr5 67750048 67750101 -131880049 + (CA)n Simple_repeat Simple_repeat 1 53 0 5716 148 15 13 chr5 67750101 67750437 -131879713 + L1PB1 LINE L1 5812 6146 -5 14171 83 28 4 chr5 67750561 67752720 -131877430 + L1P LINE L1 2762 4972 -1174 12912 41 9 1 chr5 67752828 67754997 -131875153 + L1PA3 LINE L1 3647 5834 -321 214 300 50 0 chr5 67755534 67755594 -131874556 - MIR SINE MIR -103 105 43 291 257 0 76 chr5 67755800 67755905 -131874245 - MIR SINE MIR 0 262 166 828 253 45 88 chr5 67756482 67756968 -131873182 + MLT1J LTR MaLR 45 509 -2 37 39 0 0 chr5 67757453 67757504 -131872646 + AT_rich Low_complexity Low_complexity 1 51 0 1038 231 62 3 chr5 67757505 67757848 -131872302 + L1MDa LINE L1 1072 1735 -4726 725 226 11 0 chr5 67757863 67758053 -131872097 - L1MA4 LINE L1 -21 6279 6088 1933 138 165 8 chr5 67758129 67758499 -131871651 - MSTA LTR MaLR 0 428 1 808 273 44 44 chr5 67758505 67759010 -131871140 + L1ME LINE L1 632 1136 -5069 545 259 18 95 chr5 67759040 67759481 -131870669 + L1ME LINE L1 1860 2266 -4130 318 253 74 32 chr5 67759520 67759615 -131870535 + L1ME LINE L1 2341 2439 -3776 181 276 0 69 chr5 67759897 67759955 -131870195 + L2 LINE L2 2083 2136 -1178 601 240 8 0 chr5 67760960 67761089 -131869061 - MER5A DNA MER1_type -1 188 59 8339 73 4 0 chr5 67761089 67762215 -131867935 + L1P LINE L1 39 1168 -4978 312 113 94 0 chr5 67762393 67762446 -131867704 - MER5A DNA MER1_type -113 76 19 340 213 9 74 chr5 67763364 67763472 -131866678 + MIR SINE MIR 36 136 -126 535 281 113 9 chr5 67763511 67763732 -131866418 - L3 LINE CR1 -154 1423 1180 190 297 14 14 chr5 67764344 67764418 -131865732 - L3 LINE CR1 -650 927 854 969 256 20 61 chr5 67765360 67765709 -131864441 - L1MC/D LINE L1 -1985 5823 5494 1983 194 124 44 chr5 67765709 67765744 -131864406 - MLT1F1 LTR MaLR -3 564 533 1489 153 30 8 chr5 67765744 67766006 -131864144 + AluJb SINE Alu 1 268 -44 1983 194 124 44 chr5 67766006 67766492 -131863658 - MLT1F1 LTR MaLR -34 533 1 969 256 20 61 chr5 67766492 67766583 -131863567 - L1MC/D LINE L1 -2314 5494 5401 760 131 36 0 chr5 67766583 67766720 -131863430 - L1MA10 LINE L1 0 6334 6193 1287 207 43 0 chr5 67766723 67767047 -131863103 + L1ME LINE L1 3283 3620 -2595 239 260 0 13 chr5 67767069 67767146 -131863004 - L1MC/D LINE L1 -2436 5372 5297 2211 120 3 0 chr5 67767290 67767591 -131862559 + AluSp SINE Alu 1 302 -11 288 0 0 0 chr5 67767653 67767685 -131862465 + (TG)n Simple_repeat Simple_repeat 2 33 0 1397 188 14 58 chr5 67767697 67767989 -131862161 - AluJb SINE Alu -33 279 1 3897 169 26 4 chr5 67768115 67768839 -131861311 + MER6 DNA MER2_type 3 742 -123 4754 122 80 6 chr5 67769052 67769647 -131860503 + MER4A-int LTR ERV1 5642 6326 -272 2235 119 10 0 chr5 67769647 67769949 -131860201 + AluSx SINE Alu 3 307 -5 4754 122 80 6 chr5 67769949 67770239 -131859911 + MER4A-int LTR ERV1 6326 6593 -5 574 90 10 30 chr5 67770251 67770351 -131859799 + MER4A LTR ERV1 1 98 -566 1672 113 11 85 chr5 67770351 67770722 -131859428 + MER4A LTR ERV1 263 664 0 2932 187 18 64 chr5 67770724 67770861 -131859289 - L1MB1 LINE L1 -196 5972 5830 2279 100 0 10 chr5 67770861 67771160 -131858990 - AluSc SINE Alu -13 296 1 2932 187 18 64 chr5 67771160 67772095 -131858055 - L1MB1 LINE L1 -338 5830 4944 385 379 40 18 chr5 67772619 67773015 -131857135 + ERVL LTR ERVL 856 1260 -4504 520 262 52 82 chr5 67773023 67773256 -131856894 + ERVL LTR ERVL 4441 4666 -1098 863 311 32 3 chr5 67773534 67773875 -131856275 + ERVL LTR ERVL 5046 5396 -368 680 273 76 44 chr5 67774188 67774291 -131855859 + LTR33A LTR ERVL 1 99 -424 261 0 0 0 chr5 67774291 67774320 -131855830 + (TG)n Simple_repeat Simple_repeat 2 30 0 680 273 76 44 chr5 67774320 67774531 -131855619 + LTR33A LTR ERVL 99 325 -198 426 206 0 0 chr5 67774549 67774641 -131855509 + LTR33A LTR ERVL 432 523 0 2857 155 11 17 chr5 67774758 67775286 -131854864 - L1MB7 LINE L1 -16 6168 5644 580 125 0 0 chr5 67775386 67775466 -131854684 + AluSg/x SINE Alu 211 290 -22 2735 148 96 32 chr5 67775473 67776070 -131854080 + MER4-int LTR ERV1 2874 3532 -3066 2173 142 0 0 chr5 67776070 67776380 -131853770 - AluSx SINE Alu -2 310 1 2735 148 96 32 chr5 67776380 67776541 -131853609 + MER4-int LTR ERV1 3532 3681 -2917 6559 110 48 23 chr5 67776545 67777768 -131852382 + MER4-int LTR ERV1 3842 5095 -1503 395 347 55 18 chr5 67778337 67778611 -131851539 - MLT1K LTR MaLR -287 301 18 219 269 26 51 chr5 67778612 67778690 -131851460 + L2 LINE L2 3177 3252 -20 253 182 0 18 chr5 67780046 67780101 -131850049 + L1ME3A LINE L1 6034 6087 -83 333 312 45 19 chr5 67780553 67780707 -131849443 - L1ME4a LINE L1 -11 6110 5953 204 67 0 0 chr5 67780712 67780742 -131849408 + (TG)n Simple_repeat Simple_repeat 2 31 0 2560 121 15 5 chr5 67780746 67781151 -131848999 - MSTB LTR MaLR -17 409 1 273 210 0 0 chr5 67781347 67781409 -131848741 + (TATATG)n Simple_repeat Simple_repeat 1 62 0 1887 157 7 0 chr5 67781698 67781979 -131848171 - AluJb SINE Alu -15 297 15 185 176 0 0 chr5 67783414 67783448 -131846702 + MIR3 SINE MIR 123 156 -52 183 129 0 0 chr5 67783887 67783918 -131846232 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 748 256 6 0 chr5 67784077 67784257 -131845893 - MER5A DNA MER1_type -1 188 8 473 221 188 0 chr5 67784275 67784429 -131845721 + MER5A DNA MER1_type 7 189 0 2378 224 77 38 chr5 67784840 67785713 -131844437 + L1ME1 LINE L1 5255 6161 -5 1862 150 36 0 chr5 67786004 67786278 -131843872 + AluSx SINE Alu 1 325 0 262 98 0 0 chr5 67786278 67786319 -131843831 + (TAAA)n Simple_repeat Simple_repeat 2 80 0 322 178 140 56 chr5 67786489 67786596 -131843554 + MIR SINE MIR 60 175 -87 430 222 28 37 chr5 67786606 67786714 -131843436 - L1MC2 LINE L1 -10 6334 6228 * 2955 171 29 115 chr5 67786709 67787411 -131842739 - L1MC1 LINE L1 -229 6104 5464 1748 196 48 30 chr5 67787715 67787750 -131842400 - MLT2D LTR ERVL -8 406 373 1065 24 53 0 chr5 67787750 67787919 -131842231 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 1748 196 48 30 chr5 67787919 67788282 -131841868 - MLT2D LTR ERVL -41 373 1 231 331 30 70 chr5 67789140 67789352 -131840798 + MIR SINE MIR 3 207 -55 280 274 0 0 chr5 67789381 67789443 -131840707 - MIR SINE MIR -58 150 89 778 185 47 65 chr5 67789526 67789595 -131840555 - MIR SINE MIR -32 230 161 1598 216 156 67 chr5 67789595 67790193 -131839957 - MLT1E1 LTR MaLR 0 654 4 778 185 47 65 chr5 67790193 67790355 -131839795 - MIR SINE MIR -101 161 3 2066 161 30 8 chr5 67791450 67791817 -131838333 + THE1C LTR MaLR 1 375 0 1949 139 3 3 chr5 67792026 67792345 -131837805 + AluSx SINE Alu 1 312 0 3318 149 9 19 chr5 67793610 67793984 -131836166 + MER6A DNA MER2_type 1 370 -495 2245 84 14 0 chr5 67793984 67794270 -131835880 - AluSq SINE Alu -23 290 1 3318 149 9 19 chr5 67794270 67794430 -131835720 + MER6A DNA MER2_type 370 530 -75 1442 201 0 34 chr5 67794435 67794469 -131835681 - AluJo SINE Alu -4 308 274 207 0 0 0 chr5 67794469 67794492 -131835658 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1442 201 0 34 chr5 67794492 67794755 -131835395 - AluJo SINE Alu -38 274 21 379 169 0 0 chr5 67794762 67794821 -131835329 + MER6A DNA MER2_type 546 604 -1 343 188 31 31 chr5 67794996 67795092 -131835058 - MLT1K LTR MaLR -44 544 449 370 230 30 40 chr5 67795194 67795294 -131834856 - MLT1L LTR MaLR -354 261 163 623 298 113 69 chr5 67795506 67796475 -131833675 - L2 LINE L2 -1 3271 2253 319 330 10 0 chr5 67796488 67796591 -131833559 - L2 LINE L2 -233 3080 2977 1246 65 140 65 chr5 67797052 67797266 -131832884 + MER30 DNA MER1_type 1 230 0 452 232 0 56 chr5 67799080 67799222 -131830928 - MIR SINE MIR -51 211 78 636 177 5 181 chr5 67800206 67800355 -131829795 - MER5B DNA MER1_type -1 177 76 10061 61 12 1 chr5 67800355 67802399 -131827751 - L1PA6 LINE L1 -3 6151 4079 636 177 5 181 chr5 67802399 67802464 -131827686 - MER5B DNA MER1_type -102 76 1 371 280 51 0 chr5 67802740 67802858 -131827292 + MER5A DNA MER1_type 37 160 -29 491 103 241 0 chr5 67803959 67804046 -131826104 - AluSq/x SINE Alu -204 109 2 2580 176 22 57 chr5 67804046 67804676 -131825474 - L1 LINE L1 -1257 4889 4282 255 251 264 12 chr5 67805658 67805821 -131824329 + L3 LINE CR1 1371 1574 -3 476 297 104 0 chr5 67806784 67806966 -131823184 - LTR16C LTR ERVL -16 475 275 720 230 52 38 chr5 67807905 67808137 -131822013 + MIR SINE MIR 11 241 -21 276 322 119 12 chr5 67808155 67808364 -131821786 + MIR SINE MIR 24 253 -9 3377 111 4 39 chr5 67808551 67809084 -131821066 + L1MA5A LINE L1 5639 6152 -145 341 253 23 0 chr5 67809556 67809643 -131820507 + L1MC4 LINE L1 6608 6696 -1346 386 245 64 0 chr5 67809900 67809994 -131820156 - MIR SINE MIR -70 192 93 189 0 0 0 chr5 67810928 67810949 -131819201 + (T)n Simple_repeat Simple_repeat 1 21 0 225 240 0 0 chr5 67812417 67812467 -131817683 + CT-rich Low_complexity Low_complexity 3 52 0 333 287 37 0 chr5 67813090 67813198 -131816952 + LTR16A1 LTR ERVL 3 114 -343 704 249 49 16 chr5 67813250 67813435 -131816715 + LTR16A1 LTR ERVL 267 457 0 253 235 12 47 chr5 67813439 67813524 -131816626 + MIR3 SINE MIR 120 201 -7 1354 107 92 10 chr5 67814182 67814378 -131815772 + AluJb SINE Alu 84 295 -17 224 279 197 0 chr5 67815039 67815161 -131814989 + MIR3 SINE MIR 7 152 -56 219 326 32 0 chr5 67815180 67815275 -131814875 - MIR3 SINE MIR -1 207 110 1132 189 54 114 chr5 67815563 67815949 -131814201 + MLT1A1 LTR MaLR 2 364 -1 579 301 102 52 chr5 67816659 67817081 -131813069 - L3 LINE CR1 -24 1553 1111 387 0 0 0 chr5 67817484 67817527 -131812623 + (TCCA)n Simple_repeat Simple_repeat 2 44 0 2457 93 47 16 chr5 67817772 67818136 -131812014 + THE1C LTR MaLR 1 375 0 10298 113 36 14 chr5 67818136 67819682 -131810468 + THE1C-int LTR MaLR 1 1580 0 2200 129 44 16 chr5 67819682 67820047 -131810103 + THE1C LTR MaLR 1 375 0 254 116 0 23 chr5 67821064 67821107 -131809043 + L2 LINE L2 3267 3308 -5 646 278 25 0 chr5 67821466 67821628 -131808522 - MER45A DNA AcHobo 0 178 13 391 264 138 13 chr5 67821858 67822017 -131808133 - MIR SINE MIR -64 198 20 2461 86 0 0 chr5 67822648 67822952 -131807198 - AluY SINE Alu -7 304 1 1936 136 56 44 chr5 67823215 67823575 -131806575 - THE1B LTR MaLR 0 364 1 2256 140 9 0 chr5 67823576 67823925 -131806225 - MER47A DNA MER2_type -14 352 1 422 237 53 8 chr5 67826186 67826317 -131803833 - MIR SINE MIR -3 259 123 268 284 45 0 chr5 67826515 67826603 -131803547 + L2 LINE L2 2914 3005 -267 2882 161 74 86 chr5 67826604 67827306 -131802844 - LTR8A LTR ERV1 0 727 34 352 306 73 0 chr5 67827382 67827506 -131802644 + L2 LINE L2 3137 3269 -3 267 215 0 0 chr5 67828163 67828228 -131801922 + CT-rich Low_complexity Low_complexity 2 66 0 491 233 69 86 chr5 67828273 67828518 -131801632 + MER34 LTR ERV1 26 266 -276 * 607 204 9 0 chr5 67828513 67828621 -131801529 - MLT2B1 LTR ERVL -67 453 345 2539 195 18 5 chr5 67828627 67829073 -131801077 - LTR32 LTR ERVL -5 466 15 1624 205 28 64 chr5 67829072 67829433 -131800717 - MLT2B1 LTR ERVL -171 349 2 * 406 209 144 76 chr5 67829433 67829696 -131800454 + MER34 LTR ERV1 279 537 -5 679 235 74 12 chr5 67830018 67830180 -131799970 + MLT1J LTR MaLR 28 199 -312 229 207 0 35 chr5 67830320 67830378 -131799772 + L2 LINE L2 3258 3313 0 23 0 0 0 chr5 67831422 67831445 -131798705 + AT_rich Low_complexity Low_complexity 1 23 0 215 160 20 60 chr5 67832065 67832115 -131798035 - L2 LINE L2 -32 3281 3234 343 38 38 0 chr5 67832365 67832418 -131797732 + (TG)n Simple_repeat Simple_repeat 1 55 0 261 173 19 0 chr5 67832428 67832480 -131797670 + MER5A DNA MER1_type 132 184 -5 627 291 94 8 chr5 67832823 67833142 -131797008 - L1ME LINE L1 -458 5663 5316 409 261 24 34 chr5 67833298 67833477 -131796673 + MIR SINE MIR 36 212 -50 200 182 0 0 chr5 67833763 67833796 -131796354 + CT-rich Low_complexity Low_complexity 1 33 0 258 266 16 16 chr5 67833798 67833862 -131796288 - L2 LINE L2 -51 3221 3158 233 337 10 20 chr5 67834029 67834127 -131796023 - MIR SINE MIR -92 116 20 193 302 111 40 chr5 67836379 67836505 -131793645 - L2 LINE L2 -6 3307 3173 332 380 20 19 chr5 67836557 67836714 -131793436 - MIR SINE MIR -62 146 16 425 262 57 21 chr5 67838028 67838169 -131791981 - MIR SINE MIR 0 262 117 367 322 35 0 chr5 67838171 67838373 -131791777 - L1ME LINE L1 -966 5180 4972 209 333 0 42 chr5 67838656 67838752 -131791398 - MIR SINE MIR -81 127 36 356 288 78 42 chr5 67839057 67839248 -131790902 + L2 LINE L2 3075 3272 0 260 290 16 0 chr5 67840034 67840096 -131790054 + L2 LINE L2 3203 3265 -7 * 314 277 75 6 chr5 67840089 67840243 -131789907 + MIR SINE MIR 34 200 -62 393 259 9 19 chr5 67840389 67840497 -131789653 - Charlie7 DNA MER1_type -2499 113 7 2997 198 35 88 chr5 67840605 67841111 -131789039 - MER21B LTR ERV1 -111 752 302 2490 119 16 14 chr5 67841111 67841481 -131788669 - THE1C LTR MaLR -4 371 1 2997 198 35 88 chr5 67841481 67841768 -131788382 - MER21B LTR ERV1 -561 302 1 488 307 122 21 chr5 67842196 67842288 -131787862 - L2 LINE L2 0 3313 3232 2556 142 25 2 chr5 67842288 67842682 -131787468 - MER57A LTR ERV1 0 403 1 488 307 122 21 chr5 67842682 67842876 -131787274 - L2 LINE L2 -81 3232 2998 283 295 33 74 chr5 67844787 67845031 -131785119 - L2 LINE L2 -2934 380 147 2204 190 40 9 chr5 67845277 67845730 -131784420 - MLT1C LTR MaLR 0 467 1 431 241 0 0 chr5 67846544 67846627 -131783523 + L2 LINE L2 3188 3270 -2 578 312 77 16 chr5 67846687 67846934 -131783216 + MIR SINE MIR 1 262 0 545 242 61 42 chr5 67848005 67848170 -131781980 - MIR SINE MIR -80 182 15 210 37 0 0 chr5 67848245 67848272 -131781878 + (AAGTG)n Simple_repeat Simple_repeat 5 31 0 1104 260 131 23 chr5 67848518 67848906 -131781244 - MER57B LTR ERV1 -4 430 1 464 265 42 9 chr5 67848931 67849068 -131781082 - MIR SINE MIR -63 145 5 1589 94 75 0 chr5 67849175 67849387 -131780763 - MER30 DNA MER1_type -2 228 1 544 306 33 17 chr5 67849412 67849592 -131780558 - MIR SINE MIR -71 191 9 194 263 0 12 chr5 67850440 67850520 -131779630 + CT-rich Low_complexity Low_complexity 1 79 0 14556 125 18 9 chr5 67850718 67852643 -131777507 - Tigger1 DNA MER2_type -1 2417 467 1991 163 3 0 chr5 67852643 67852950 -131777200 + AluSx SINE Alu 1 308 -4 14556 125 18 9 chr5 67852950 67853215 -131776935 - Tigger1 DNA MER2_type -1951 467 206 257 353 0 0 chr5 67853539 67853607 -131776543 - L2 LINE L2 -92 3180 3113 259 286 57 0 chr5 67854253 67854323 -131775827 - L2 LINE L2 -256 3057 2984 324 104 45 19 chr5 67854680 67854749 -131775401 - L1HS LINE L1 -25 6149 6057 252 0 0 0 chr5 67854762 67854790 -131775360 + (TAA)n Simple_repeat Simple_repeat 3 30 0 352 44 0 0 chr5 67856568 67856613 -131773537 - MADE1 DNA Mariner 0 80 36 790 212 0 0 chr5 67856924 67857056 -131773094 - FLAM_C SINE Alu -1 132 1 21 0 0 0 chr5 67857712 67857733 -131772417 + AT_rich Low_complexity Low_complexity 1 21 0 239 286 54 0 chr5 67858016 67858072 -131772078 - L2 LINE L2 -10 3262 3204 206 348 0 14 chr5 67859808 67859877 -131770273 - L2 LINE L2 0 3272 3205 237 33 0 0 chr5 67860266 67860296 -131769854 + (CA)n Simple_repeat Simple_repeat 2 31 0 691 197 17 73 chr5 67860297 67860405 -131769745 + MER97b DNA MER1_type? 11 107 -946 2010 110 53 3 chr5 67860405 67860687 -131769463 - AluSg SINE Alu -14 296 1 691 197 17 73 chr5 67860687 67860756 -131769394 + MER97b DNA MER1_type? 107 178 -875 390 274 70 37 chr5 67860853 67861068 -131769082 - L1ME4a LINE L1 -158 5963 5742 976 237 61 74 chr5 67861506 67862030 -131768120 - HAL1b LINE L1 -640 708 192 2188 110 0 10 chr5 67863651 67863951 -131766199 - AluSx SINE Alu -15 297 1 2155 83 22 0 chr5 67864220 67864524 -131765626 + AluSx SINE Alu 1 310 0 319 260 0 31 chr5 67864536 67864632 -131765518 - MIR SINE MIR -11 251 159 * 654 256 89 15 chr5 67864629 67864832 -131765318 + MIR SINE MIR 34 251 -11 350 211 105 44 chr5 67864851 67864965 -131765185 - MIR SINE MIR -105 157 37 1818 187 91 8 chr5 67865596 67865970 -131764180 + MER82 DNA MER2_type 2 406 -247 8415 177 38 9 chr5 67865981 67867570 -131762580 + L1PBa LINE L1 6 1640 -5223 7280 142 57 9 chr5 67867542 67870165 -131759985 + L1PB2 LINE L1 8 2750 -3453 * 43428 37 24 9 chr5 67870162 67876223 -131753927 - L1PA3 LINE L1 0 6155 4 12554 174 17 8 chr5 67876219 67879666 -131750484 + L1PB2 LINE L1 2729 6205 -3 * 245 260 27 0 chr5 67879682 67879736 -131750414 + MER82 DNA MER2_type 390 445 -208 324 111 0 19 chr5 67879736 67879790 -131750360 + MER4C LTR ERV1 1 53 -412 249 263 131 102 chr5 67979803 67980039 -131650111 + L2 LINE L2 3025 3267 -5 331 206 49 20 chr5 67980600 67980702 -131649448 + CT-rich Low_complexity Low_complexity 3 107 0 572 216 94 69 chr5 67980807 67980879 -131649271 - MER112 DNA MER1_type -9 251 182 2086 76 8 4 chr5 67980879 67981142 -131649008 - AluSq SINE Alu -49 264 1 572 216 94 69 chr5 67981142 67981314 -131648836 - MER112 DNA MER1_type -78 182 1 1156 147 84 5 chr5 67981989 67982179 -131647971 + MER3 DNA MER1_type 5 209 0 1896 228 137 6 chr5 67984237 67984732 -131645418 - MLT1F1 LTR MaLR -6 561 2 206 360 101 0 chr5 67985113 67985202 -131644948 + L3 LINE CR1 1344 1441 -136 940 290 37 29 chr5 67985308 67985656 -131644494 - MLT1I LTR MaLR -58 351 1 576 266 49 22 chr5 67985656 67985840 -131644310 - L2 LINE L2 -31 3282 3094 601 232 29 14 chr5 67988062 67988200 -131641950 + MIR SINE MIR 88 227 -35 587 304 88 24 chr5 67988252 67988502 -131641648 + L2 LINE L2 2881 3146 -167 923 163 70 6 chr5 67988591 67988781 -131641369 - MER58B DNA MER1_type 0 341 1 23 33 0 0 chr5 67989616 67989646 -131640504 + AT_rich Low_complexity Low_complexity 1 30 0 437 346 95 0 chr5 67990188 67990399 -131639751 + L2 LINE L2 2907 3137 -176 23 33 0 0 chr5 67991013 67991043 -131639107 + AT_rich Low_complexity Low_complexity 1 30 0 245 317 19 19 chr5 67991202 67991306 -131638844 + CT-rich Low_complexity Low_complexity 3 106 0 2521 132 72 10 chr5 67991655 67992058 -131638092 - MSTA LTR MaLR 0 428 1 251 289 181 0 chr5 67992218 67992367 -131637783 - MIR SINE MIR -18 244 69 204 392 62 10 chr5 67992959 67993056 -131637094 + L2 LINE L2 3151 3252 -20 467 281 53 29 chr5 67993188 67993359 -131636791 + MIR3 SINE MIR 34 208 0 390 42 0 0 chr5 67994295 67994343 -131635807 + (TG)n Simple_repeat Simple_repeat 2 49 0 694 225 136 6 chr5 67994922 67995091 -131635059 - MER20 DNA MER1_type 0 219 29 396 250 29 59 chr5 67995362 67995498 -131634652 + L2 LINE L2 3182 3313 0 947 137 6 0 chr5 67995592 67995767 -131634383 + (TCCC)n Simple_repeat Simple_repeat 3 178 0 2288 113 0 3 chr5 67995773 67996083 -131634067 - AluSc SINE Alu 0 309 1 537 301 60 11 chr5 67996917 67997100 -131633050 - MIR SINE MIR -4 258 67 31654 43 34 4 chr5 67997579 68001516 -131628634 + L1P LINE L1 1 4057 -2089 24 53 0 0 chr5 68001779 68001817 -131628333 + AT_rich Low_complexity Low_complexity 1 38 0 883 270 137 32 chr5 68001888 68002594 -131627556 - L2 LINE L2 0 3313 2423 890 156 73 19 chr5 68002964 68003169 -131626981 - L1MA8 LINE L1 0 6291 6076 268 249 232 76 chr5 68004912 68005097 -131625053 + L1MC4 LINE L1 7803 8016 -26 33 43 0 0 chr5 68005687 68005734 -131624416 + AT_rich Low_complexity Low_complexity 1 47 0 866 233 0 0 chr5 68005734 68005897 -131624253 - FRAM SINE Alu -3 163 1 762 211 108 14 chr5 68006598 68006811 -131623339 + MER112 DNA MER1_type 22 254 -6 866 220 38 90 chr5 68007361 68007396 -131622754 - L1ME2 LINE L1 -11 6153 6118 2123 85 21 18 chr5 68007396 68007721 -131622429 - AluSc SINE Alu 0 326 1 866 220 38 90 chr5 68007721 68008029 -131622121 - L1ME2 LINE L1 -46 6118 5827 * 1035 240 26 32 chr5 68008028 68008046 -131622104 - L1ME2 LINE L1 -554 5610 5593 1492 107 30 4 chr5 68008046 68008279 -131621871 + L1MA5A LINE L1 6058 6296 -1 1035 240 26 32 chr5 68008279 68008568 -131621582 - L1ME2 LINE L1 -571 5593 5305 909 235 67 39 chr5 68010243 68010498 -131619652 - MIR SINE MIR 0 262 1 454 307 53 13 chr5 68010661 68010961 -131619189 + L1ME4a LINE L1 5570 5881 -240 329 167 0 0 chr5 68011035 68011089 -131619061 + Tigger5 DNA MER2_type 1 54 -2269 * 525 162 57 19 chr5 68011082 68011187 -131618963 + Tigger5 DNA MER2_type 2215 2323 0 225 233 233 31 chr5 68011368 68011497 -131618653 - MLT1I LTR MaLR 0 409 255 650 213 0 0 chr5 68011761 68011869 -131618281 + Tigger3(Golem) DNA MER2_type 1 108 -2921 4130 114 87 12 chr5 68011871 68012562 -131617588 + Tigger3(Golem) DNA MER2_type 2287 3029 0 1096 186 147 32 chr5 68012568 68012853 -131617297 + MER2 DNA MER2_type 1 318 -27 23 54 0 0 chr5 68012926 68012963 -131617187 + AT_rich Low_complexity Low_complexity 1 37 0 351 261 75 22 chr5 68012966 68013100 -131617050 - L1ME4a LINE L1 -5 6116 5976 846 289 90 28 chr5 68014139 68014476 -131615674 - MLT1J2 LTR MaLR -7 443 81 423 0 0 0 chr5 68014476 68014523 -131615627 + (TG)n Simple_repeat Simple_repeat 1 47 0 846 289 90 28 chr5 68014523 68014542 -131615608 - MLT1J2 LTR MaLR -369 81 65 242 273 32 104 chr5 68014565 68014719 -131615431 - L2 LINE L2 -878 2436 2294 3275 76 0 57 chr5 68014877 68015335 -131614815 - MLT2A1 LTR ERVL -12 432 1 589 290 108 85 chr5 68015336 68015730 -131614420 - L2 LINE L2 -1441 1873 1456 2717 127 54 7 chr5 68015730 68016171 -131613979 + L1MD1 LINE L1 5781 6242 0 589 290 108 85 chr5 68016171 68016444 -131613706 - L2 LINE L2 -1858 1456 1191 1541 172 110 49 chr5 68016745 68017071 -131613079 - MER7A DNA MER2_type -1 345 2 2363 93 0 6 chr5 68018480 68018792 -131611358 - AluY SINE Alu -1 310 1 397 293 187 0 chr5 68020001 68020151 -131609999 + MIR3 SINE MIR 6 183 -25 1082 195 111 60 chr5 68020848 68021181 -131608969 + MLT1A1 LTR MaLR 16 365 0 586 172 172 6 chr5 68022013 68022170 -131607980 - MER53 DNA DNA -1 188 6 405 0 0 0 chr5 68022304 68022349 -131607801 + (TG)n Simple_repeat Simple_repeat 2 46 0 232 309 103 37 chr5 68022752 68022888 -131607262 + MIR3 SINE MIR 8 152 -56 320 359 35 21 chr5 68024356 68024498 -131605652 - MIR SINE MIR -105 157 14 338 287 96 38 chr5 68024692 68024849 -131605301 - MIR SINE MIR -77 185 20 207 0 0 0 chr5 68026696 68026719 -131603431 + (T)n Simple_repeat Simple_repeat 1 23 0 1388 137 75 16 chr5 68027366 68027621 -131602529 - L1MB3 LINE L1 -8 6175 5906 2229 73 140 240 chr5 68027621 68028263 -131601887 - LTR12 LTR ERV1 -136 578 1 1399 169 92 0 chr5 68028263 68028524 -131601626 - L1MB3 LINE L1 -271 5912 5628 2288 104 0 10 chr5 68029306 68029613 -131600537 + AluSq SINE Alu 1 304 -9 21 36 0 0 chr5 68031582 68031610 -131598540 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 68031806 68031829 -131598321 + AT_rich Low_complexity Low_complexity 1 23 0 273 301 105 65 chr5 68032069 68032238 -131597912 - MIR SINE MIR -17 245 63 1979 113 6 60 chr5 68032238 68032556 -131597594 + AluSx SINE Alu 5 305 -7 273 301 105 65 chr5 68032556 68032615 -131597535 - MIR SINE MIR -199 63 8 242 250 317 18 chr5 68032764 68032928 -131597222 + MIR SINE MIR 50 262 0 413 215 0 0 chr5 68033027 68033106 -131597044 - L2 LINE L2 -5 3308 3230 22 43 0 21 chr5 68033145 68033178 -131596972 + AT_rich Low_complexity Low_complexity 1 34 -12 1793 178 0 0 chr5 68033178 68033471 -131596679 - AluJo SINE Alu -19 293 1 22 43 0 21 chr5 68033471 68033484 -131596666 + AT_rich Low_complexity Low_complexity 34 46 0 23 54 0 0 chr5 68033740 68033777 -131596373 + AT_rich Low_complexity Low_complexity 1 37 0 273 216 95 26 chr5 68034267 68034383 -131595767 + L1ME4a LINE L1 5942 6065 -56 445 324 76 16 chr5 68034464 68034649 -131595501 - MIR SINE MIR -48 214 19 316 269 56 9 chr5 68035088 68035196 -131594954 - L2 LINE L2 -1 3312 3200 1916 236 134 40 chr5 68036353 68036489 -131593661 - L1MC4 LINE L1 0 8042 7920 183 80 0 0 chr5 68036489 68036514 -131593636 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1916 236 134 40 chr5 68036514 68037192 -131592958 - L1MC4 LINE L1 -122 7920 7152 270 0 0 0 chr5 68037292 68037322 -131592828 + (T)n Simple_repeat Simple_repeat 1 30 0 388 327 39 32 chr5 68037553 68037709 -131592441 + MIR3 SINE MIR 45 201 -7 1026 182 0 0 chr5 68037848 68038013 -131592137 - FRAM SINE Alu -12 164 1 2093 136 0 0 chr5 68038325 68038627 -131591523 - AluSq SINE Alu -11 302 1 208 252 84 47 chr5 68038861 68038968 -131591182 + MIR SINE MIR 152 262 0 474 237 26 58 chr5 68039671 68039827 -131590323 + L2 LINE L2 3163 3313 0 825 239 91 32 chr5 68041049 68041334 -131588816 + L2 LINE L2 3011 3312 -1 627 281 113 5 chr5 68041543 68041764 -131588386 + MIR SINE MIR 8 252 -10 728 264 83 0 chr5 68042556 68042810 -131587340 - L1ME LINE L1 -304 5817 5543 297 317 12 0 chr5 68044137 68044219 -131585931 + L2 LINE L2 3185 3267 -5 778 261 87 4 chr5 68047069 68047310 -131582840 + MIR SINE MIR 2 262 0 2807 90 12 2 chr5 68047611 68048010 -131582140 + L1PA13 LINE L1 5756 6158 -5 256 297 11 0 chr5 68048781 68048872 -131581278 - Charlie7 DNA MER1_type -2516 96 5 193 319 47 89 chr5 68050333 68050502 -131579648 + MIR SINE MIR 47 208 -54 561 282 89 22 chr5 68050530 68050934 -131579216 - L1ME LINE L1 -1302 4844 4414 476 273 157 25 chr5 68051077 68051556 -131578594 - L1ME LINE L1 -1931 4215 3643 269 262 81 28 chr5 68051854 68051995 -131578155 - MLT1H LTR MaLR -250 159 19 413 297 65 0 chr5 68052066 68052221 -131577929 - L1ME LINE L1 -2608 3538 3374 310 314 98 49 chr5 68052326 68052673 -131577477 - L1 LINE L1 -1006 5140 4777 1646 99 25 35 chr5 68054363 68054542 -131575608 - L1MA2 LINE L1 0 6304 6128 2774 13 0 0 chr5 68054542 68054845 -131575305 + AluYb8 SINE Alu 1 303 -15 1646 99 25 35 chr5 68054845 68054949 -131575201 - L1MA2 LINE L1 -176 6128 6024 1433 115 0 0 chr5 68057066 68057257 -131572893 - AluSc SINE Alu -14 295 105 867 240 151 18 chr5 68057564 68057902 -131572248 - MLT1J1 LTR MaLR -15 431 49 214 279 139 0 chr5 68060267 68060353 -131569797 + MIR3 SINE MIR 111 208 0 192 286 53 98 chr5 68060724 68060857 -131569293 - MIR3 SINE MIR -78 130 4 1164 148 201 21 chr5 68062625 68062909 -131567241 + MER44D DNA MER2_type 4 608 -1 1264 98 26 10 chr5 68063473 68063666 -131566484 - MER30 DNA MER1_type -34 196 1 626 232 85 24 chr5 68064121 68064285 -131565865 - MER5B DNA MER1_type -4 174 1 28 0 0 0 chr5 68064986 68065014 -131565136 + AT_rich Low_complexity Low_complexity 1 28 0 228 180 0 0 chr5 68065494 68065544 -131564606 + L1ME4a LINE L1 6061 6110 -11 219 255 41 41 chr5 68066139 68066237 -131563913 + MIR SINE MIR 46 143 -119 26 0 0 0 chr5 68066599 68066625 -131563525 + AT_rich Low_complexity Low_complexity 1 26 0 1583 145 0 134 chr5 68067102 68067446 -131562704 - AluJb SINE Alu -14 298 1 23 0 0 0 chr5 68067530 68067553 -131562597 + AT_rich Low_complexity Low_complexity 1 23 0 244 276 17 0 chr5 68069382 68069440 -131560710 - MIR SINE MIR -111 151 93 835 236 43 47 chr5 68070178 68070247 -131559903 + MIR SINE MIR 2 70 -192 2232 145 11 21 chr5 68070247 68070626 -131559524 + THE1C LTR MaLR 1 375 0 835 236 43 47 chr5 68070626 68070810 -131559340 + MIR SINE MIR 70 254 -8 1938 119 0 55 chr5 68070812 68071124 -131559026 - AluSx SINE Alu -17 295 1 3016 130 150 0 chr5 68071970 68072585 -131557565 - Tigger3(Golem) DNA MER2_type 0 3028 2310 477 0 0 0 chr5 68072585 68072638 -131557512 + (CA)n Simple_repeat Simple_repeat 2 54 0 3016 130 150 0 chr5 68072638 68072670 -131557480 - Tigger3(Golem) DNA MER2_type -718 2310 2284 535 229 0 0 chr5 68072673 68072778 -131557372 - Tigger3(Golem) DNA MER2_type -2924 105 1 22 35 0 0 chr5 68077013 68077042 -131553108 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 68077142 68077184 -131552966 + AT_rich Low_complexity Low_complexity 1 42 0 196 274 35 62 chr5 68080566 68080679 -131549471 + L2 LINE L2 2456 2565 -749 27 0 0 0 chr5 68081106 68081133 -131549017 + AT_rich Low_complexity Low_complexity 1 27 0 394 281 187 10 chr5 68081172 68081375 -131548775 + MIR SINE MIR 20 258 -4 558 243 48 29 chr5 68081429 68081639 -131548511 - LTR33 LTR ERVL -1 520 307 372 231 97 8 chr5 68081739 68081873 -131548277 - LTR33 LTR ERVL -363 158 13 24 0 0 0 chr5 68082777 68082801 -131547349 + AT_rich Low_complexity Low_complexity 1 24 0 205 283 0 17 chr5 68083126 68083186 -131546964 - MIR SINE MIR -119 143 85 2012 151 0 3 chr5 68083218 68083510 -131546640 + AluJb SINE Alu 5 295 -17 260 192 27 41 chr5 68083510 68083583 -131546567 + L1ME LINE L1 5820 5891 -230 3964 140 18 8 chr5 68083625 68084288 -131545862 + L1PA15 LINE L1 5496 6165 0 276 30 0 0 chr5 68084353 68084386 -131545764 + (TG)n Simple_repeat Simple_repeat 2 34 0 236 219 70 79 chr5 68084926 68085040 -131545110 + MER5B DNA MER1_type 3 115 -63 279 0 0 0 chr5 68085199 68085230 -131544920 + (TA)n Simple_repeat Simple_repeat 2 32 0 198 0 0 0 chr5 68085230 68085252 -131544898 + (T)n Simple_repeat Simple_repeat 1 22 0 301 321 69 28 chr5 68085944 68086162 -131543988 - L2 LINE L2 -182 3090 2864 527 354 125 16 chr5 68086198 68086687 -131543463 - L2 LINE L2 -528 2786 2245 414 260 68 94 chr5 68088267 68088502 -131541648 + MIR SINE MIR 8 236 -26 319 303 42 8 chr5 68088593 68088712 -131541438 + MIR SINE MIR 63 185 -77 1726 167 43 43 chr5 68088738 68089110 -131541040 - MLT1A2 LTR MaLR 0 374 3 531 0 0 0 chr5 68091481 68091540 -131538610 + (TG)n Simple_repeat Simple_repeat 2 60 0 276 309 161 47 chr5 68091868 68092017 -131538133 - L2 LINE L2 0 3272 3107 370 283 21 43 chr5 68092203 68092390 -131537760 - L2 LINE L2 -987 2327 2145 342 0 0 0 chr5 68092427 68092465 -131537685 + (TA)n Simple_repeat Simple_repeat 1 38 0 5297 48 8 0 chr5 68092474 68093124 -131537026 - L1PA6 LINE L1 -18 6136 5482 598 278 75 19 chr5 68093269 68093481 -131536669 - MIR SINE MIR 0 262 39 2124 141 0 6 chr5 68094688 68095001 -131535149 + AluSx SINE Alu 1 311 -1 1230 146 0 0 chr5 68095002 68095187 -131534963 + AluSg/x SINE Alu 127 311 -1 282 365 5 18 chr5 68095221 68095440 -131534710 + MLT1K LTR MaLR 363 578 -10 360 298 40 7 chr5 68096706 68096857 -131533293 + CT-rich Low_complexity Low_complexity 5 160 0 294 379 29 14 chr5 68097538 68097678 -131532472 - MIR3 SINE MIR 0 208 67 1772 160 80 12 chr5 68097784 68098122 -131532028 + MER46B DNA MER2_type 1 236 0 304 174 106 137 chr5 68099377 68099491 -131530659 - MIR SINE MIR -1 261 152 1778 172 10 3 chr5 68099491 68099782 -131530368 - AluJb SINE Alu -19 293 1 304 174 106 137 chr5 68099782 68099828 -131530322 - MIR SINE MIR -110 152 106 27 0 0 0 chr5 68101222 68101249 -131528901 + AT_rich Low_complexity Low_complexity 1 27 0 240 237 0 0 chr5 68101390 68101449 -131528701 - FLAM_A SINE Alu -2 131 73 185 254 55 18 chr5 68101515 68101570 -131528580 + L2 LINE L2 3211 3267 -5 889 278 131 8 chr5 68101646 68102145 -131528005 - MLT1F1 LTR MaLR 0 567 10 1980 143 148 5 chr5 68102400 68102772 -131527378 + MSTA LTR MaLR 4 428 0 1974 138 14 7 chr5 68103214 68103510 -131526640 + AluJo SINE Alu 1 298 -14 641 302 97 27 chr5 68104537 68105282 -131524868 - L1ME3A LINE L1 -318 5852 5161 1767 123 3 137 chr5 68105282 68105639 -131524511 - AluSx SINE Alu -3 309 1 641 302 97 27 chr5 68105639 68106345 -131523805 - L1ME3A LINE L1 -1009 5161 4298 771 276 78 9 chr5 68107414 68107646 -131522504 + MIR SINE MIR 12 259 -3 208 135 0 0 chr5 68108091 68108128 -131522022 + (A)n Simple_repeat Simple_repeat 1 37 0 454 208 160 8 chr5 68108682 68108807 -131521343 - MIR SINE MIR -2 260 117 203 329 0 0 chr5 68110150 68110220 -131519930 - MIR SINE MIR -69 139 70 359 338 20 13 chr5 68110817 68110968 -131519182 + CT-rich Low_complexity Low_complexity 3 154 0 391 251 89 59 chr5 68110985 68111326 -131518824 + LTR33 LTR ERVL 112 521 0 682 284 258 18 chr5 68111389 68111769 -131518381 - L2 LINE L2 0 3313 2843 337 108 62 46 chr5 68111961 68112026 -131518124 + MLT1C LTR MaLR 1 66 -401 818 152 25 111 chr5 68112031 68112229 -131517921 + MLT1C LTR MaLR 210 467 0 437 241 23 154 chr5 68112229 68112574 -131517576 - L2 LINE L2 -720 2594 2295 2346 103 0 0 chr5 68113129 68113429 -131516721 + AluSx SINE Alu 1 300 -12 1483 174 60 13 chr5 68114076 68114256 -131515894 - AluJo SINE Alu 0 312 111 207 0 0 0 chr5 68114256 68114279 -131515871 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1483 174 60 13 chr5 68114279 68114396 -131515754 - AluJo SINE Alu -201 111 1 402 173 0 0 chr5 68115732 68115807 -131514343 + (TA)n Simple_repeat Simple_repeat 2 76 0 1368 191 97 37 chr5 68118352 68118754 -131511396 + MER63B DNA MER1_type 1 426 -10 2405 95 0 0 chr5 68119484 68119789 -131510361 - AluSx SINE Alu -7 305 1 239 291 77 77 chr5 68120916 68121033 -131509117 + MIR3 SINE MIR 49 165 -43 629 286 20 30 chr5 68122727 68122926 -131507224 + MIR SINE MIR 49 245 -17 22 0 0 0 chr5 68123071 68123093 -131507057 + AT_rich Low_complexity Low_complexity 1 22 0 1527 194 3 24 chr5 68123093 68123386 -131506764 - AluJo SINE Alu -25 287 1 788 249 39 30 chr5 68124626 68124859 -131505291 - MIR SINE MIR -26 236 2 272 149 254 0 chr5 68125003 68125070 -131505080 - L1ME3A LINE L1 -5 6165 6082 331 257 14 0 chr5 68125769 68125843 -131504307 - MIR SINE MIR -147 115 41 299 198 0 89 chr5 68126194 68126317 -131503833 + L1MC4a LINE L1 5305 5413 -780 2442 55 0 0 chr5 68126317 68126606 -131503544 + AluY SINE Alu 1 289 -22 299 198 0 89 chr5 68126606 68126633 -131503517 + L1MC4a LINE L1 5413 5441 -752 222 171 0 0 chr5 68126658 68126699 -131503451 + (CATA)n Simple_repeat Simple_repeat 2 42 0 1712 182 0 17 chr5 68126814 68127116 -131503034 - AluJb SINE Alu -6 306 10 813 303 69 19 chr5 68127120 68127543 -131502607 + L1MC4a LINE L1 5510 5953 -1855 262 208 19 19 chr5 68128158 68128211 -131501939 - L2 LINE L2 -16 3256 3204 361 224 136 27 chr5 68128288 68128435 -131501715 - L1ME3A LINE L1 -1 6169 6007 21 0 0 0 chr5 68129422 68129443 -131500707 + AT_rich Low_complexity Low_complexity 1 21 0 684 289 61 25 chr5 68129498 68130035 -131500115 - L1M4 LINE L1 -4842 1482 880 268 215 75 70 chr5 68130059 68130245 -131499905 + L1MCc LINE L1 1166 1352 -5071 * 326 309 28 35 chr5 68130243 68130525 -131499625 + L1MCc LINE L1 4 283 -6140 2527 63 0 0 chr5 68130735 68131036 -131499114 - AluSg SINE Alu -9 301 1 595 298 94 4 chr5 68133206 68133441 -131496709 - MIR SINE MIR 0 262 7 196 30 61 0 chr5 68134361 68134394 -131495756 + A-rich Low_complexity Low_complexity 2 36 0 488 234 64 41 chr5 68134723 68134894 -131495256 - MLT1J LTR MaLR -1 510 336 237 250 46 65 chr5 68134918 68135026 -131495124 + MIR SINE MIR 86 191 -71 1137 31 23 0 chr5 68135236 68135366 -131494784 + AluY SINE Alu 1 133 -178 314 320 101 11 chr5 68137088 68137266 -131492884 - MIR SINE MIR -59 203 10 524 225 23 31 chr5 68138063 68138192 -131491958 + MIR SINE MIR 26 153 -109 302 324 125 27 chr5 68138628 68139029 -131491121 + L2 LINE L2 2538 2977 -337 378 293 61 11 chr5 68139093 68139274 -131490876 - MLT1L LTR MaLR 0 615 426 236 29 0 29 chr5 68140484 68140518 -131489632 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1874 105 3 80 chr5 68140526 68140839 -131489311 - AluSx SINE Alu -23 289 1 445 226 0 0 chr5 68141570 68141654 -131488496 + MER5B DNA MER1_type 95 178 0 929 249 234 29 chr5 68142571 68143020 -131487130 + L2 LINE L2 2091 2631 -683 2456 217 9 29 chr5 68143154 68143735 -131486415 - L1MD3 LINE L1 -18 7977 7409 506 179 10 24 chr5 68143735 68143832 -131486318 - MLT1F1 LTR MaLR -445 122 35 688 142 17 17 chr5 68145499 68145619 -131484531 + FLAM_A SINE Alu 23 142 0 210 71 0 0 chr5 68145908 68145936 -131484214 + (CAAAG)n Simple_repeat Simple_repeat 2 29 0 349 265 88 39 chr5 68150247 68150428 -131479722 + L1ME3A LINE L1 5773 5962 -208 300 27 0 0 chr5 68150742 68150779 -131479371 + (TG)n Simple_repeat Simple_repeat 2 38 0 200 173 0 39 chr5 68151971 68152023 -131478127 + (ATTG)n Simple_repeat Simple_repeat 1 50 0 31 0 0 0 chr5 68152032 68152063 -131478087 + AT_rich Low_complexity Low_complexity 1 31 0 996 171 24 47 chr5 68152083 68152294 -131477856 - L1PA16 LINE L1 -9 6157 5952 1672 110 16 8 chr5 68152436 68152682 -131477468 + AluSx SINE Alu 61 308 -4 4626 143 82 10 chr5 68152893 68153727 -131476423 - MER4D LTR ERV1 -9 894 1 2495 151 39 7 chr5 68154373 68154512 -131475638 - MER61B LTR ERV1 0 425 292 441 0 0 0 chr5 68154512 68154561 -131475589 + (GA)n Simple_repeat Simple_repeat 1 49 0 2495 151 39 7 chr5 68154561 68154833 -131475317 - MER61B LTR ERV1 -133 292 1 456 19 0 0 chr5 68154938 68154991 -131475159 + (TG)n Simple_repeat Simple_repeat 2 54 0 22 0 0 0 chr5 68155239 68155261 -131474889 + AT_rich Low_complexity Low_complexity 1 22 0 209 253 24 129 chr5 68155699 68155869 -131474281 + MER5B DNA MER1_type 27 178 0 815 219 127 5 chr5 68156134 68156339 -131473811 + MIR SINE MIR 12 241 -21 373 288 53 71 chr5 68156818 68156988 -131473162 - MIR3 SINE MIR -9 199 33 2096 156 34 0 chr5 68157066 68157418 -131472732 + THE1B LTR MaLR 1 364 0 2353 99 10 0 chr5 68158095 68158399 -131471751 - AluSc SINE Alu -2 307 1 1470 166 6 105 chr5 68158773 68159098 -131471052 + AluJo SINE Alu 1 293 -9 1399 252 39 33 chr5 68160471 68160931 -131469219 - L1ME1 LINE L1 -6 6160 5698 * 2312 207 101 13 chr5 68160929 68161556 -131468594 - L1ME1 LINE L1 -904 5242 4561 1110 151 41 37 chr5 68162082 68162300 -131467850 + MER20 DNA MER1_type 1 219 0 2146 110 0 13 chr5 68162333 68162641 -131467509 + AluSx SINE Alu 1 304 -8 979 170 204 11 chr5 68163327 68163592 -131466558 + MER33 DNA MER1_type 1 316 -8 772 290 108 37 chr5 68164121 68165194 -131464956 - L1MC4a LINE L1 -743 5403 4695 21 0 0 0 chr5 68165243 68165264 -131464886 + AT_rich Low_complexity Low_complexity 1 21 0 1554 115 0 0 chr5 68166249 68166449 -131463701 + AluSg/x SINE Alu 77 276 -36 351 0 0 0 chr5 68166452 68166491 -131463659 + (CA)n Simple_repeat Simple_repeat 2 40 0 2245 104 10 3 chr5 68166731 68167040 -131463110 + AluSx SINE Alu 1 311 -1 273 264 23 35 chr5 68167099 68167186 -131462964 + L1MC4 LINE L1 6772 6857 -1185 717 12 0 0 chr5 68167220 68167251 -131462899 + (TTCC)n Simple_repeat Simple_repeat 1 113 0 717 12 0 0 chr5 68167251 68167333 -131462817 + (TTCC)n Simple_repeat Simple_repeat 2 83 0 26 50 0 0 chr5 68167668 68167708 -131462442 + AT_rich Low_complexity Low_complexity 1 40 0 1685 116 0 0 chr5 68167902 68168127 -131462023 - AluSp SINE Alu -72 241 17 1938 140 7 10 chr5 68168827 68169120 -131461030 + AluSx SINE Alu 1 292 -20 24 32 0 0 chr5 68171692 68171723 -131458427 + AT_rich Low_complexity Low_complexity 1 31 0 2077 74 40 40 chr5 68171749 68172045 -131458105 - AluY SINE Alu -15 296 1 257 220 20 0 chr5 68173053 68173103 -131457047 + L2 LINE L2 3214 3264 -8 1988 132 4 0 chr5 68173618 68173899 -131456251 + AluSx SINE Alu 1 282 -30 270 281 0 0 chr5 68173919 68174008 -131456142 + L1MC4 LINE L1 6615 6703 -1339 24 0 0 0 chr5 68174379 68174403 -131455747 + AT_rich Low_complexity Low_complexity 1 24 0 2263 174 44 18 chr5 68175082 68175537 -131454613 - MLT1C LTR MaLR 0 467 1 2787 184 14 44 chr5 68176322 68176893 -131453257 - MLT2B3 LTR ERVL 0 554 1 861 275 111 49 chr5 68176893 68177344 -131452806 + MLT1J LTR MaLR 33 511 0 830 264 78 9 chr5 68177671 68178004 -131452146 + Tigger8 DNA MER2_type 226 581 -85 732 199 0 0 chr5 68181212 68181343 -131448807 - FLAM_A SINE Alu -2 131 1 297 0 0 0 chr5 68181567 68181600 -131448550 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 219 175 25 0 chr5 68182349 68182389 -131447761 + MIR SINE MIR 53 93 -169 2340 110 7 0 chr5 68183011 68183319 -131446831 - AluSx SINE Alu -1 311 2 376 278 41 0 chr5 68183351 68183461 -131446689 - MIR SINE MIR -62 146 36 719 255 5 59 chr5 68183583 68183713 -131446437 + MIR SINE MIR 43 160 -102 2106 92 251 0 chr5 68183713 68184071 -131446079 - LTR7 LTR ERV1 -2 448 1 719 255 5 59 chr5 68184071 68184144 -131446006 + MIR SINE MIR 160 235 -27 298 227 35 128 chr5 68184489 68184630 -131445520 - L2 LINE L2 -8 3305 3178 231 274 36 36 chr5 68184704 68184788 -131445362 + L2 LINE L2 3185 3268 -4 279 242 88 0 chr5 68185395 68185486 -131444664 - L1 LINE L1 -1871 4275 4177 467 253 144 23 chr5 68186106 68186280 -131443870 + MER106A DNA MER1_type 42 236 0 455 259 71 10 chr5 68186493 68186690 -131443460 + L1MDb LINE L1 1118 1326 -5083 331 217 112 38 chr5 68186695 68186936 -131443214 - L1ME LINE L1 -613 5551 5302 796 84 11 152 chr5 68187072 68187250 -131442900 - Tigger1 DNA MER2_type -5 2413 2261 932 167 17 23 chr5 68187250 68187424 -131442726 + AluJo SINE Alu 115 287 -25 231 156 0 0 chr5 68187436 68187481 -131442669 - LTR66 LTR ERVL -172 438 394 * 12699 144 62 2 chr5 68187479 68189571 -131440579 - Tigger1 DNA MER2_type -173 2245 28 419 335 87 5 chr5 68190113 68190159 -131439991 + MIR SINE MIR 1 42 -220 1476 171 103 35 chr5 68190159 68190499 -131439651 - MLT1A1 LTR MaLR -2 363 1 419 335 87 5 chr5 68190499 68190637 -131439513 + MIR SINE MIR 42 200 -62 609 167 30 21 chr5 68192008 68192175 -131437975 - MLT1E1 LTR MaLR -2 652 379 447 227 310 20 chr5 68192218 68192421 -131437729 - MLT1E1 LTR MaLR -392 262 1 327 330 0 20 chr5 68196178 68196278 -131433872 - L2 LINE L2 -14 3299 3202 309 266 50 11 chr5 68196517 68196610 -131433540 + MIR SINE MIR 1 99 -109 2263 111 38 19 chr5 68196610 68196978 -131433172 + THE1C LTR MaLR 1 375 0 867 218 49 132 chr5 68197359 68197599 -131432551 - L1ME3A LINE L1 -61 6109 5921 3152 157 25 37 chr5 68197599 68198250 -131431900 - L1MB3 LINE L1 0 6183 5541 867 218 49 132 chr5 68198250 68198455 -131431695 - L1ME3A LINE L1 -249 5921 5701 906 182 78 17 chr5 68198715 68198946 -131431204 - MLT1D LTR MaLR -258 247 3 495 0 0 0 chr5 68198951 68199006 -131431144 + (TG)n Simple_repeat Simple_repeat 2 56 0 957 237 50 50 chr5 68199037 68199476 -131430674 - HAL1 LINE L1 -424 2083 1645 207 262 33 0 chr5 68199520 68199581 -131430569 + GA-rich Low_complexity Low_complexity 25 87 0 472 296 162 38 chr5 68199857 68200400 -131429750 + L2 LINE L2 2701 3311 -2 726 156 18 66 chr5 68201132 68201299 -131428851 - MER20 DNA MER1_type -18 201 43 741 260 178 32 chr5 68201791 68201973 -131428177 - L2 LINE L2 0 3313 3159 2078 138 0 0 chr5 68201973 68202263 -131427887 + AluSx SINE Alu 3 292 -20 1933 153 3 38 chr5 68202271 68202585 -131427565 + AluJb SINE Alu 1 303 -9 741 260 178 32 chr5 68202585 68202804 -131427346 - L2 LINE L2 -159 3154 2843 475 240 67 24 chr5 68202848 68203056 -131427094 - L1MC5 LINE L1 -35 7926 7710 318 118 26 40 chr5 68203248 68203324 -131426826 - L1MC5 LINE L1 -372 7589 7515 186 71 0 0 chr5 68203324 68203352 -131426798 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 828 163 0 0 chr5 68203352 68203475 -131426675 - FLAM_C SINE Alu -20 123 1 949 241 95 56 chr5 68203476 68204087 -131426063 - L1MC5 LINE L1 -449 7512 6878 536 251 159 26 chr5 68204102 68204329 -131425821 - L2 LINE L2 -536 2778 2522 197 374 0 0 chr5 68204340 68204455 -131425695 - L2 LINE L2 -933 2381 2267 568 170 0 10 chr5 68204700 68204800 -131425350 - FLAM_A SINE Alu -16 126 28 228 207 50 0 chr5 68205069 68205132 -131425018 - MER91A DNA MER1_type -5 185 123 236 315 212 20 chr5 68205139 68205285 -131424865 - MER91A DNA MER1_type -22 174 1 238 200 0 12 chr5 68205351 68205413 -131424737 + MIR3 SINE MIR 111 172 -36 291 114 0 0 chr5 68205493 68205537 -131424613 + (GA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr5 68206308 68206329 -131423821 + AT_rich Low_complexity Low_complexity 1 21 0 193 71 0 71 chr5 68208065 68208107 -131422043 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 588 256 0 0 chr5 68209651 68209780 -131420370 + FLAM_A SINE Alu 1 129 -4 1785 156 38 7 chr5 68209789 68210077 -131420073 + AluJb SINE Alu 11 307 -5 22 88 0 0 chr5 68210481 68210538 -131419612 + AT_rich Low_complexity Low_complexity 1 57 0 2347 64 3 10 chr5 68211873 68212169 -131417981 + AluY SINE Alu 1 294 -17 22 35 0 0 chr5 68212218 68212247 -131417903 + AT_rich Low_complexity Low_complexity 1 29 0 261 57 0 0 chr5 68212561 68212596 -131417554 + (T)n Simple_repeat Simple_repeat 1 35 0 218 337 30 20 chr5 68213124 68213225 -131416925 - L2 LINE L2 -504 2810 2709 219 291 39 29 chr5 68213398 68213501 -131416649 - MIR SINE MIR -58 204 101 229 323 10 40 chr5 68213613 68213712 -131416438 + L2 LINE L2 3218 3313 0 803 275 169 23 chr5 68213737 68214122 -131416028 - MLT1J1 LTR MaLR 0 446 6 290 330 158 15 chr5 68214825 68215028 -131415122 + L3 LINE CR1 1335 1566 -11 186 43 0 0 chr5 68215038 68215061 -131415089 + (A)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr5 68215114 68215135 -131415015 + AT_rich Low_complexity Low_complexity 1 21 0 331 287 9 26 chr5 68215851 68215966 -131414184 + L2 LINE L2 3201 3313 0 354 193 53 79 chr5 68216308 68216422 -131413728 + L2 LINE L2 3192 3302 -11 273 316 32 13 chr5 68216492 68216647 -131413503 + MER102b DNA MER1_type 175 332 -9 335 272 44 44 chr5 68216653 68216767 -131413383 + MIR SINE MIR 27 140 -68 499 275 51 0 chr5 68218066 68218204 -131411946 - MIR SINE MIR -8 254 110 247 325 9 9 chr5 68218222 68218336 -131411814 - MER94 DNA DNA -8 126 13 197 278 111 22 chr5 68219372 68219462 -131410688 + MIR SINE MIR 124 221 -41 528 284 294 21 chr5 68219913 68220294 -131409856 + L2 LINE L2 2492 2976 -338 1454 234 172 67 chr5 68220334 68221363 -131408787 - L1MC4 LINE L1 -31 8011 6875 648 287 140 20 chr5 68221394 68221694 -131408456 + L2 LINE L2 2978 3313 0 797 199 31 25 chr5 68222272 68222468 -131407682 + MLT1D LTR MaLR 1 197 -308 708 229 31 0 chr5 68222481 68222673 -131407477 + MLT1D LTR MaLR 308 505 0 2210 102 0 14 chr5 68223063 68223357 -131406793 + AluSx SINE Alu 1 290 -22 243 333 149 0 chr5 68223745 68223859 -131406291 - L2 LINE L2 -5 3267 3137 2214 92 3 3 chr5 68224460 68224752 -131405398 - AluSp SINE Alu -21 292 1 239 237 23 84 chr5 68228756 68228887 -131401263 + MER117 DNA MER1_type 69 191 -6 369 268 21 31 chr5 68229404 68229501 -131400649 - MIR SINE MIR -111 151 56 215 234 52 26 chr5 68230844 68230921 -131399229 + MIR SINE MIR 68 146 -116 509 268 8 8 chr5 68231331 68231454 -131398696 - L2 LINE L2 -5 3308 3186 245 281 60 97 chr5 68231707 68231838 -131398312 - L2 LINE L2 -439 2875 2754 418 99 28 0 chr5 68231838 68231909 -131398241 - L1PA10 LINE L1 0 6168 6096 245 281 60 97 chr5 68231909 68231994 -131398156 - L2 LINE L2 -560 2754 2667 265 277 45 0 chr5 68232980 68233092 -131397058 - L2 LINE L2 -1240 2074 1958 308 125 16 0 chr5 68234417 68234481 -131395669 + (TA)n Simple_repeat Simple_repeat 2 66 0 1715 173 31 0 chr5 68234481 68234770 -131395380 - AluJo SINE Alu -14 298 1 413 110 27 0 chr5 68235319 68235392 -131394758 - U3 snRNA snRNA -142 75 1 899 263 93 4 chr5 68236332 68236568 -131393582 - MIR SINE MIR -4 258 2 21 0 0 0 chr5 68237691 68237712 -131392438 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 68238653 68238674 -131391476 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 68238882 68238906 -131391244 + AT_rich Low_complexity Low_complexity 1 24 0 622 201 67 0 chr5 68239003 68239137 -131391013 - MIR SINE MIR -46 216 74 1506 192 14 11 chr5 68239165 68239446 -131390704 + AluJo SINE Alu 1 282 -30 572 313 66 79 chr5 68242137 68242594 -131387556 - L2 LINE L2 -14 3258 2808 456 292 52 73 chr5 68242632 68242824 -131387326 - MER5A DNA MER1_type -1 188 1 2144 114 3 3 chr5 68244211 68244509 -131385641 - AluSc SINE Alu -9 300 3 704 232 14 0 chr5 68244545 68244687 -131385463 + FRAM SINE Alu 6 149 -27 279 54 0 0 chr5 68244687 68244724 -131385426 + (CA)n Simple_repeat Simple_repeat 2 38 0 2216 110 0 3 chr5 68244806 68245097 -131385053 + AluSq SINE Alu 1 290 -23 327 249 84 80 chr5 68245134 68245255 -131384895 - L1ME4a LINE L1 -164 5957 5833 1945 202 47 32 chr5 68245255 68245749 -131384401 - MLT1D LTR MaLR 0 505 5 327 249 84 80 chr5 68245749 68245852 -131384298 - L1ME4a LINE L1 -288 5833 5732 226 255 9 9 chr5 68245979 68246085 -131384065 + (TA)n Simple_repeat Simple_repeat 2 107 0 288 225 165 60 chr5 68246126 68246251 -131383899 - L1ME4a LINE L1 -541 5580 5429 2217 111 23 3 chr5 68246251 68246558 -131383592 - AluSq SINE Alu 0 313 1 288 225 165 60 chr5 68246558 68246614 -131383536 - L1ME4a LINE L1 -692 5429 5380 217 200 20 40 chr5 68247588 68247638 -131382512 - L2 LINE L2 -87 3226 3178 2170 94 17 7 chr5 68249301 68249588 -131380562 + AluSq SINE Alu 2 291 -22 22 0 0 0 chr5 68250281 68250303 -131379847 + AT_rich Low_complexity Low_complexity 1 22 0 314 316 75 42 chr5 68250685 68250897 -131379253 - L3 LINE CR1 -286 1291 1073 212 333 90 51 chr5 68251190 68251346 -131378804 - L2 LINE L2 -4 3268 3107 329 278 153 37 chr5 68251457 68251673 -131378477 - MIR SINE MIR -8 254 14 1046 156 120 0 chr5 68251700 68251892 -131378258 + MER20 DNA MER1_type 1 215 -4 207 211 0 26 chr5 68257880 68257918 -131372232 - L2 LINE L2 -17 3255 3219 674 296 130 4 chr5 68258252 68258482 -131371668 + MIR SINE MIR 2 260 -2 322 266 121 17 chr5 68259123 68259296 -131370854 - L2 LINE L2 -202 3111 2921 277 350 58 8 chr5 68264775 68264895 -131365255 - L2 LINE L2 -1 3271 3146 486 282 30 0 chr5 68265007 68265138 -131365012 - MIR SINE MIR -70 192 58 340 250 80 9 chr5 68266292 68266404 -131363746 - L1ME1 LINE L1 -5 6161 6042 2150 122 16 0 chr5 68266412 68266715 -131363435 - AluSg SINE Alu -2 308 1 229 224 143 0 chr5 68266821 68266919 -131363231 - L1MD3 LINE L1 -170 7825 7714 1479 176 81 7 chr5 68267071 68267343 -131362807 + AluJb SINE Alu 1 292 -20 26 0 0 0 chr5 68267651 68267677 -131362473 + AT_rich Low_complexity Low_complexity 1 26 0 279 309 68 12 chr5 68267750 68267912 -131362238 - L1ME4a LINE L1 -81 6040 5870 304 336 130 0 chr5 68268650 68268796 -131361354 - MIR3 SINE MIR -8 200 36 193 208 62 0 chr5 68269515 68269563 -131360587 + MIR SINE MIR 85 135 -73 673 243 104 0 chr5 68269632 68269834 -131360316 + MER58A DNA MER1_type 1 223 -1 21 0 0 0 chr5 68270635 68270656 -131359494 + AT_rich Low_complexity Low_complexity 1 21 0 340 200 94 24 chr5 68270904 68270989 -131359161 + L2 LINE L2 3177 3267 -5 323 321 0 7 chr5 68270998 68271135 -131359015 - L1ME4a LINE L1 -417 5704 5569 1918 114 32 9 chr5 68272745 68273087 -131357063 - L1MB2 LINE L1 -28 6143 5794 304 292 11 0 chr5 68273133 68273222 -131356928 - L1MC4 LINE L1 -1339 6703 6614 186 143 0 0 chr5 68273288 68273323 -131356827 + (TA)n Simple_repeat Simple_repeat 2 36 0 315 115 0 0 chr5 68273739 68273791 -131356359 + L1MA5A LINE L1 6241 6292 -5 276 254 16 0 chr5 68273803 68273866 -131356284 + MIR SINE MIR 42 105 -103 21 0 0 0 chr5 68273894 68273915 -131356235 + AT_rich Low_complexity Low_complexity 1 21 0 1334 191 153 8 chr5 68273919 68274317 -131355833 - Charlie4a DNA MER1_type -33 475 20 388 306 74 8 chr5 68276725 68276846 -131353304 - L2 LINE L2 -1 3271 3143 367 323 144 35 chr5 68277170 68277662 -131352488 - L2 LINE L2 -543 2771 2226 1671 185 3 20 chr5 68277666 68277964 -131352186 + AluJb SINE Alu 2 294 -18 29 94 0 0 chr5 68278757 68278842 -131351308 + AT_rich Low_complexity Low_complexity 1 85 0 184 307 45 23 chr5 68281057 68281145 -131349005 - L2 LINE L2 -849 2465 2376 222 231 141 26 chr5 68281224 68281302 -131348848 - L2 LINE L2 0 3313 3227 288 0 0 0 chr5 68282134 68282166 -131347984 + (TG)n Simple_repeat Simple_repeat 1 32 0 207 0 0 0 chr5 68282534 68282557 -131347593 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 340 96 0 0 chr5 68284667 68284719 -131345431 + MER2 DNA MER2_type 133 184 -161 1604 197 34 0 chr5 68285297 68285622 -131344528 + MER2 DNA MER2_type 1 336 -9 830 160 8 0 chr5 68285933 68286064 -131344086 + FLAM_C SINE Alu 1 132 -1 21 36 0 0 chr5 68286380 68286408 -131343742 + AT_rich Low_complexity Low_complexity 1 28 0 200 227 0 0 chr5 68287033 68287077 -131343073 + T-rich Low_complexity Low_complexity 3 46 0 21 0 0 0 chr5 68287548 68287569 -131342581 + AT_rich Low_complexity Low_complexity 1 21 0 263 93 23 0 chr5 68288782 68288825 -131341325 + (TA)n Simple_repeat Simple_repeat 1 44 0 1009 217 0 5 chr5 68289655 68289844 -131340306 + MIR SINE MIR 1 188 -74 480 223 18 84 chr5 68290347 68290453 -131339697 - MIR SINE MIR -2 260 167 2184 125 3 0 chr5 68290453 68290748 -131339402 - AluSx SINE Alu -16 296 1 480 223 18 84 chr5 68290748 68290807 -131339343 - MIR SINE MIR -95 167 106 201 292 21 31 chr5 68291003 68291099 -131339051 + MIR SINE MIR 34 128 -80 1366 189 18 21 chr5 68293336 68293621 -131336529 - AluJo SINE Alu -16 296 13 1673 163 50 0 chr5 68294359 68294436 -131335714 + MER7A DNA MER2_type 33 105 -2933 2533 112 53 7 chr5 68294436 68294854 -131335296 - LTR23 LTR ERV1 0 437 1 1673 163 50 0 chr5 68294854 68295077 -131335073 + MER7A DNA MER2_type 105 346 0 743 276 197 14 chr5 68295988 68296541 -131333609 + L2 LINE L2 2660 3313 0 230 206 27 55 chr5 68297100 68297173 -131332977 + L1ME LINE L1 5814 5884 -280 759 224 20 78 chr5 68297213 68297665 -131332485 - LTR37B LTR ERV1 -4 464 35 252 237 21 0 chr5 68297787 68297880 -131332270 - L1MC4 LINE L1 -1333 6709 6615 237 267 0 0 chr5 68297809 68297899 -131332251 + L1MC4 LINE L1 6614 6703 -1339 * 525 260 70 25 chr5 68304548 68304790 -131325360 + L1ME3 LINE L1 5680 5932 -230 229 50 25 25 chr5 68304820 68304860 -131325290 + (TA)n Simple_repeat Simple_repeat 2 41 0 23 33 0 0 chr5 68304893 68304923 -131325227 + AT_rich Low_complexity Low_complexity 1 30 0 1757 161 3 23 chr5 68305519 68305818 -131324332 - AluSx SINE Alu -14 298 6 255 125 0 0 chr5 68306412 68306452 -131323698 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 21 0 0 0 chr5 68306756 68306777 -131323373 + AT_rich Low_complexity Low_complexity 1 21 0 1403 195 23 0 chr5 68306779 68307035 -131323115 + AluJo SINE Alu 1 262 -50 450 303 72 66 chr5 68307038 68307480 -131322670 + L1MC4a LINE L1 5436 5880 -1928 1944 204 106 39 chr5 68307701 68308288 -131321862 - MLT1E2 LTR MaLR 0 626 1 2150 68 8 0 chr5 68309296 68309562 -131320588 - AluY SINE Alu -8 303 36 308 208 160 28 chr5 68309833 68309977 -131320173 - L1ME4a LINE L1 -5 6116 5954 2150 90 14 3 chr5 68310940 68311228 -131318922 + AluSc SINE Alu 1 291 -18 855 322 77 26 chr5 68312603 68313147 -131317003 - L2 LINE L2 -758 2556 1985 254 219 85 0 chr5 68314989 68315071 -131315079 - L1ME4a LINE L1 -6 6115 6027 575 239 36 99 chr5 68315102 68315545 -131314605 - L1ME4a LINE L1 -56 6065 5651 336 307 55 39 chr5 68316035 68316207 -131313943 + MIR3 SINE MIR 4 176 -52 2131 127 21 29 chr5 68317054 68317432 -131312718 - THE1C LTR MaLR 0 375 1 262 313 88 0 chr5 68318028 68318108 -131312042 + MIR SINE MIR 67 153 -55 225 0 0 0 chr5 68318108 68318133 -131312017 + (TA)n Simple_repeat Simple_repeat 1 25 0 342 0 0 0 chr5 68318702 68318740 -131311410 + (TG)n Simple_repeat Simple_repeat 2 39 0 189 0 0 0 chr5 68320077 68320098 -131310052 + (TAAAA)n Simple_repeat Simple_repeat 3 23 0 2119 109 0 23 chr5 68320291 68320593 -131309557 + AluSx SINE Alu 1 295 -17 303 291 171 17 chr5 68321067 68321535 -131308615 + L1ME4a LINE L1 3808 4347 -1799 461 293 15 35 chr5 68321858 68322056 -131308094 - LTR67 LTR ERVL -14 543 350 379 273 14 56 chr5 68322214 68322357 -131307793 - LTR67 LTR ERVL -420 137 1 1179 288 91 25 chr5 68322560 68323597 -131306553 + L1ME4a LINE L1 4894 5999 -122 1874 159 0 16 chr5 68323982 68324296 -131305854 - AluJb SINE Alu -3 309 1 28 29 0 0 chr5 68324657 68324692 -131305458 + AT_rich Low_complexity Low_complexity 1 35 0 186 327 124 65 chr5 68324960 68325404 -131304746 + L2 LINE L2 2021 2490 -824 737 237 10 41 chr5 68325630 68325824 -131304326 + MER5A DNA MER1_type 2 189 0 386 267 73 24 chr5 68325831 68325996 -131304154 + MER5B DNA MER1_type 5 177 -1 780 186 34 34 chr5 68326040 68326217 -131303933 - MER5B DNA MER1_type -1 177 1 365 301 99 46 chr5 68326505 68326641 -131303509 + L1MC4a LINE L1 4905 5032 -1114 2144 106 6 13 chr5 68326641 68326952 -131303198 + AluSq SINE Alu 4 312 -1 365 301 99 46 chr5 68326952 68327117 -131303033 + L1MC4a LINE L1 5032 5222 -924 226 207 35 0 chr5 68327230 68327288 -131302862 + L1MC4a LINE L1 5349 5408 -2400 712 89 122 0 chr5 68327310 68327433 -131302717 + L1MA9 LINE L1 6173 6310 -2 539 159 17 0 chr5 68327433 68327666 -131302484 + (TA)n Simple_repeat Simple_repeat 1 237 0 316 300 0 0 chr5 68327666 68327756 -131302394 - L1MC4 LINE L1 -1339 6703 6614 413 353 173 10 chr5 68327784 68328178 -131301972 + L1MC4a LINE L1 5449 5906 -1902 26 0 0 0 chr5 68329547 68329573 -131300577 + AT_rich Low_complexity Low_complexity 1 26 0 416 147 32 13 chr5 68329759 68329916 -131300234 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 24 0 0 0 chr5 68329922 68329946 -131300204 + AT_rich Low_complexity Low_complexity 1 24 0 267 86 0 0 chr5 68330408 68330443 -131299707 + MER5B DNA MER1_type 4 38 -140 360 134 15 0 chr5 68330463 68330530 -131299620 + L1PB4 LINE L1 6084 6151 -5 2494 207 55 51 chr5 68330717 68330968 -131299182 + L1MC4 LINE L1 7300 7549 -493 2189 81 49 0 chr5 68330968 68331253 -131298897 - AluSc SINE Alu -10 299 1 2494 207 55 51 chr5 68331253 68331741 -131298409 + L1MC4 LINE L1 7548 8042 0 277 213 33 0 chr5 68331756 68331817 -131298333 - MER5B DNA MER1_type -96 82 20 810 278 110 29 chr5 68333918 68334264 -131295886 + L2 LINE L2 2358 2731 -583 203 105 53 0 chr5 68336544 68336582 -131293568 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 29 0 0 0 chr5 68336817 68336846 -131293304 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 68336985 68337007 -131293143 + AT_rich Low_complexity Low_complexity 1 22 0 329 130 21 109 chr5 68339106 68339298 -131290852 + C-rich Low_complexity Low_complexity 3 177 0 496 311 7 7 chr5 68346087 68346238 -131283912 - MIR SINE MIR -14 248 98 344 284 174 15 chr5 68347343 68347544 -131282606 - MARNA DNA Mariner -9 577 345 713 271 98 0 chr5 68347603 68347880 -131282270 - MER46C DNA MER2_type -31 307 4 316 328 55 25 chr5 68348041 68348276 -131281874 - L1M4 LINE L1 -3106 3040 2799 997 269 89 25 chr5 68349938 68350344 -131279806 - LTR16A LTR ERVL -3 447 16 423 123 0 0 chr5 68352855 68352920 -131277230 - L1MC1 LINE L1 -17 6316 6252 384 153 0 47 chr5 68352952 68353037 -131277113 - L1MC1 LINE L1 -201 6132 6052 252 264 8 72 chr5 68354364 68354489 -131275661 - MER5C DNA MER1_type 0 324 208 341 304 61 0 chr5 68354536 68354651 -131275499 - MER5C DNA MER1_type -193 131 10 * 356 221 186 18 chr5 68354647 68354760 -131275390 + L2 LINE L2 3179 3310 -3 488 342 111 13 chr5 68354895 68355491 -131274659 + L2 LINE L2 2053 2706 -608 29 47 0 0 chr5 68357952 68357995 -131272155 + AT_rich Low_complexity Low_complexity 1 43 0 1470 144 173 7 chr5 68358064 68358370 -131271780 + MER46B DNA MER2_type 2 233 -3 2282 111 0 0 chr5 68359562 68359859 -131270291 + AluSx SINE Alu 1 297 -15 236 30 30 0 chr5 68360084 68360117 -131270033 + (CATA)n Simple_repeat Simple_repeat 2 35 0 3376 218 55 17 chr5 68361107 68361852 -131268298 - MER21B LTR ERV1 -52 811 33 2624 46 0 3 chr5 68361852 68362159 -131267991 + AluY SINE Alu 1 306 -5 3376 218 55 17 chr5 68362159 68362194 -131267956 - MER21B LTR ERV1 -830 33 1 2416 90 0 0 chr5 68363586 68363886 -131266264 + AluSg SINE Alu 1 300 -10 22 35 0 0 chr5 68363904 68363933 -131266217 + AT_rich Low_complexity Low_complexity 1 29 0 279 0 0 0 chr5 68365001 68365032 -131265118 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2222 120 0 0 chr5 68365034 68365326 -131264824 - AluSx SINE Alu -20 292 1 1872 119 0 0 chr5 68365400 68365653 -131264497 + AluSx SINE Alu 47 299 -13 525 297 45 27 chr5 68365736 68365958 -131264192 + MIR SINE MIR 16 241 -21 57 28 0 0 chr5 68366326 68366397 -131263753 + AT_rich Low_complexity Low_complexity 1 71 0 229 228 101 0 chr5 68366439 68366518 -131263632 - L1ME4a LINE L1 -23 6098 6012 432 245 193 19 chr5 68366789 68367001 -131263149 - MIR SINE MIR -3 259 11 241 322 13 53 chr5 68368026 68368178 -131261972 - L2 LINE L2 -569 2745 2600 411 242 298 5 chr5 68368271 68368469 -131261681 + MIR SINE MIR 4 259 -3 228 293 135 70 chr5 68368490 68368705 -131261445 - L2 LINE L2 -960 2354 2126 24 32 0 0 chr5 68368775 68368806 -131261344 + AT_rich Low_complexity Low_complexity 1 31 0 319 309 142 25 chr5 68368879 68369238 -131260912 - L2 LINE L2 -2493 821 421 27 73 0 0 chr5 68370240 68370295 -131259855 + AT_rich Low_complexity Low_complexity 1 55 0 1380 137 32 0 chr5 68370397 68370616 -131259534 + MER30 DNA MER1_type 1 226 -4 542 97 0 97 chr5 68370667 68370781 -131259369 - FRAM SINE Alu -2 174 72 351 246 92 23 chr5 68372248 68372378 -131257772 - MIR SINE MIR -14 248 110 11581 80 8 1 chr5 68374072 68376425 -131253725 - L1PA7 LINE L1 0 6154 3782 2209 115 3 16 chr5 68378260 68378572 -131251578 + AluSx SINE Alu 3 310 -2 338 366 93 6 chr5 68379871 68380043 -131250107 - MIR3 SINE MIR -5 203 17 816 288 59 34 chr5 68380092 68380328 -131249822 - MIR SINE MIR 0 262 21 1226 52 0 13 chr5 68381005 68381159 -131248991 - L1PA7 LINE L1 -11 6143 5992 343 354 79 9 chr5 68381264 68381526 -131248624 - L1 LINE L1 -989 5157 4877 261 0 0 0 chr5 68384843 68384872 -131245278 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 535 236 172 6 chr5 68385193 68385350 -131244800 - MER5A DNA MER1_type -1 188 6 919 220 57 0 chr5 68386522 68386731 -131243419 + MER58A DNA MER1_type 1 221 -3 500 281 132 12 chr5 68386863 68387030 -131243120 + MIR SINE MIR 2 188 -74 1090 101 24 0 chr5 68387039 68387207 -131242943 - Tigger4(Zombi) DNA MER2_type -623 2108 1937 2048 131 0 3 chr5 68387264 68387555 -131242595 - AluSx SINE Alu -22 290 1 780 151 0 0 chr5 68387575 68387694 -131242456 - Tigger4(Zombi) DNA MER2_type -2612 119 1 348 242 94 40 chr5 68388282 68388431 -131241719 + MIR SINE MIR 34 190 -72 722 181 0 8 chr5 68391958 68392091 -131238059 + AluJo SINE Alu 2 133 -169 276 53 0 0 chr5 68393275 68393313 -131236837 + (CA)n Simple_repeat Simple_repeat 2 39 0 1004 176 39 0 chr5 68393659 68393841 -131236309 - MER5A DNA MER1_type 0 189 1 1988 167 28 4 chr5 68399803 68400155 -131229995 - MLT1A1 LTR MaLR -1 504 1 1985 154 3 6 chr5 68400381 68400693 -131229457 - AluJb SINE Alu -1 311 1 2370 90 0 0 chr5 68404404 68404703 -131225447 + AluSg1 SINE Alu 1 299 -10 425 295 30 47 chr5 68404732 68404966 -131225184 - MIR SINE MIR -21 241 12 1002 157 7 0 chr5 68407049 68407202 -131222948 + AluJo SINE Alu 136 289 -23 25 0 0 0 chr5 68407202 68407227 -131222923 + AT_rich Low_complexity Low_complexity 1 25 0 2259 118 3 0 chr5 68407377 68407681 -131222469 + AluSp SINE Alu 1 305 -8 629 255 59 39 chr5 68407688 68407994 -131222156 + L1ME4a LINE L1 5754 6065 -56 23 0 0 0 chr5 68408517 68408540 -131221610 + AT_rich Low_complexity Low_complexity 1 23 0 226 292 148 38 chr5 68408677 68408886 -131221264 - MIR SINE MIR -13 249 18 1332 252 57 16 chr5 68409893 68410381 -131219769 + HAL1 LINE L1 1996 2503 -4 200 35 35 0 chr5 68414839 68414868 -131215282 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 252 0 0 0 chr5 68415887 68415915 -131214235 + (A)n Simple_repeat Simple_repeat 1 28 0 1648 188 16 16 chr5 68418395 68418699 -131211451 + AluJo SINE Alu 1 304 -8 216 0 0 0 chr5 68419430 68419454 -131210696 + (A)n Simple_repeat Simple_repeat 1 24 0 498 296 45 5 chr5 68419529 68419728 -131210422 + L2 LINE L2 2581 2787 -527 2044 115 82 28 chr5 68419989 68420345 -131209805 + THE1C LTR MaLR 1 375 0 347 363 112 9 chr5 68420394 68420609 -131209541 - MIR SINE MIR -14 248 12 510 148 89 20 chr5 68421218 68421319 -131208831 - FLAM_A SINE Alu -19 123 16 1973 37 8 0 chr5 68421396 68421639 -131208511 - L1P LINE L1 -849 5297 5053 801 26 35 0 chr5 68421639 68421753 -131208397 + L1P LINE L1 5300 5417 -738 1338 12 49 0 chr5 68421854 68422016 -131208134 + L1PA3 LINE L1 5986 6155 0 236 244 93 35 chr5 68422297 68422383 -131207767 - MER5A DNA MER1_type -83 106 16 295 205 2 112 chr5 68422388 68422509 -131207641 + MER5B DNA MER1_type 79 175 -3 462 134 0 24 chr5 68422637 68422719 -131207431 + MER5A DNA MER1_type 9 88 -101 253 345 18 18 chr5 68422830 68422940 -131207210 + MER5A DNA MER1_type 29 138 -51 265 301 93 22 chr5 68423223 68423409 -131206741 - MIR SINE MIR -30 232 37 2051 204 64 7 chr5 68425016 68425452 -131204698 - LOR1b LTR ERV1 0 461 1 437 297 143 34 chr5 68425831 68425859 -131204291 - L1ME1 LINE L1 -110 6011 5987 2018 124 18 0 chr5 68425859 68426141 -131204009 + AluSc SINE Alu 1 287 -22 437 297 143 34 chr5 68426141 68426702 -131203448 - L1ME1 LINE L1 -134 5987 5370 267 294 20 20 chr5 68427353 68427493 -131202657 + MER5A DNA MER1_type 16 165 -23 248 286 33 22 chr5 68428633 68428724 -131201426 + MER5B DNA MER1_type 63 154 -24 2373 86 0 0 chr5 68428855 68429147 -131201003 + AluSx SINE Alu 1 292 -20 291 54 0 0 chr5 68429161 68429198 -131200952 + (CA)n Simple_repeat Simple_repeat 2 38 0 413 284 166 29 chr5 68429216 68429529 -131200621 - L2 LINE L2 -26 3287 2932 205 259 35 0 chr5 68433110 68433168 -131196982 + MIR SINE MIR 81 140 -122 270 0 0 0 chr5 68433201 68433231 -131196919 + (CA)n Simple_repeat Simple_repeat 1 30 0 366 23 0 0 chr5 68433427 68433470 -131196680 + (CA)n Simple_repeat Simple_repeat 2 44 0 1078 248 44 16 chr5 68434207 68434525 -131195625 + L1MC5 LINE L1 5584 5910 -1898 596 273 59 92 chr5 68434783 68434987 -131195163 + L1MC5 LINE L1 7261 7470 -572 234 0 0 0 chr5 68434987 68435013 -131195137 + (TG)n Simple_repeat Simple_repeat 1 26 0 596 273 59 92 chr5 68435013 68435380 -131194770 + L1MC5 LINE L1 7470 7900 -142 1769 186 43 50 chr5 68435876 68436065 -131194085 + MSTD LTR MaLR 1 190 -206 1961 101 4 0 chr5 68436065 68436322 -131193828 + AluSg SINE Alu 39 296 -14 1769 186 43 50 chr5 68436322 68436531 -131193619 + MSTD LTR MaLR 190 396 0 1693 212 65 12 chr5 68437948 68438377 -131191773 - L1MC4 LINE L1 -158 7884 7433 290 276 204 13 chr5 68439340 68439492 -131190658 + MIR SINE MIR 31 211 -51 192 40 0 0 chr5 68439880 68439905 -131190245 + (GA)n Simple_repeat Simple_repeat 2 26 0 283 271 53 67 chr5 68440018 68440243 -131189907 + L1M4 LINE L1 4944 5165 -981 2451 75 10 0 chr5 68440246 68440554 -131189596 + AluY SINE Alu 1 311 0 1912 137 98 22 chr5 68440563 68440922 -131189228 - MSTA LTR MaLR -42 386 1 2174 179 65 19 chr5 68440922 68441335 -131188815 + MER101 LTR ERV1 43 474 0 2605 189 92 58 chr5 68442163 68442866 -131187284 + LTR8A LTR ERV1 1 727 0 2073 136 0 58 chr5 68442935 68443317 -131186833 + MLT1B LTR MaLR 1 360 -30 2068 135 0 25 chr5 68443335 68443654 -131186496 - AluSx SINE Alu -1 311 1 253 139 23 0 chr5 68443654 68443697 -131186453 + MLT1B LTR MaLR 347 390 0 198 0 0 0 chr5 68444942 68444964 -131185186 + (A)n Simple_repeat Simple_repeat 1 22 0 240 111 0 0 chr5 68445837 68445873 -131184277 + (CCA)n Simple_repeat Simple_repeat 2 37 0 614 263 20 68 chr5 68445905 68446156 -131183994 - MIR SINE MIR -1 261 23 471 248 14 48 chr5 68446513 68446658 -131183492 + MIR SINE MIR 73 212 -50 465 261 239 8 chr5 68447221 68447455 -131182695 - L3 LINE CR1 -106 1471 1184 389 279 88 14 chr5 68447530 68447677 -131182473 + MIR3 SINE MIR 46 203 -5 2153 130 3 0 chr5 68448655 68448963 -131181187 - AluSx SINE Alu -3 309 1 1499 263 24 42 chr5 68449245 68449797 -131180353 - MER34 LTR ERV1 0 542 1 2209 118 0 3 chr5 68449882 68450206 -131179944 - AluSq SINE Alu 0 313 1 22 56 0 0 chr5 68450963 68450999 -131179151 + AT_rich Low_complexity Low_complexity 1 36 0 30 27 0 0 chr5 68451507 68451544 -131178606 + AT_rich Low_complexity Low_complexity 1 37 0 1835 182 0 0 chr5 68451546 68451842 -131178308 + AluJb SINE Alu 1 296 -16 665 192 17 8 chr5 68451868 68451988 -131178162 - FLAM_A SINE Alu -12 121 1 208 259 12 49 chr5 68452135 68452216 -131177934 - MIR SINE MIR -28 234 157 913 54 0 0 chr5 68452218 68452330 -131177820 - AluY SINE Alu -1 310 199 339 299 35 7 chr5 68452330 68452474 -131177676 - MIR SINE MIR -95 167 20 500 242 159 0 chr5 68455724 68455906 -131174244 - MIR SINE MIR -21 241 31 375 150 88 12 chr5 68456215 68456295 -131173855 - Charlie5 DNA MER1_type 0 2624 2539 1269 156 23 43 chr5 68456898 68457200 -131172950 - Charlie5 DNA MER1_type -80 2532 2237 413 153 94 0 chr5 68457206 68457291 -131172859 - Charlie5 DNA MER1_type -2490 122 30 285 333 49 0 chr5 68457845 68457947 -131172203 + L2 LINE L2 3123 3229 -43 548 239 0 38 chr5 68458296 68458358 -131171792 - MER5B DNA MER1_type -24 154 91 2375 65 0 17 chr5 68458358 68458650 -131171500 + AluY SINE Alu 11 297 -14 548 239 0 38 chr5 68458650 68458746 -131171404 - MER5B DNA MER1_type -87 91 2 206 271 271 26 chr5 68459045 68459351 -131170799 + L2 LINE L2 1979 2359 -955 2406 58 3 7 chr5 68459375 68459667 -131170483 - AluY SINE Alu -20 291 1 2219 119 0 10 chr5 68459674 68459984 -131170166 - AluSx SINE Alu -5 307 1 973 230 14 5 chr5 68460047 68460264 -131169886 - MLT1D LTR MaLR 0 505 287 336 71 0 0 chr5 68460265 68460307 -131169843 - MLT2B2 LTR ERVL 0 515 474 1156 221 16 27 chr5 68460322 68460580 -131169570 - MLT2B1 LTR ERVL -265 255 1 918 226 36 85 chr5 68460580 68460885 -131169265 - MLT1D LTR MaLR -215 290 1 2428 91 0 0 chr5 68461128 68461437 -131168713 - AluSg1 SINE Alu 0 309 1 410 322 16 8 chr5 68461505 68461626 -131168524 + L2 LINE L2 3136 3257 -15 22 0 0 0 chr5 68461629 68461651 -131168499 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 30 chr5 68461704 68461719 -131168431 + AT_rich Low_complexity Low_complexity 1 15 -17 2245 73 0 17 chr5 68461719 68462019 -131168131 - AluY SINE Alu -16 295 1 22 0 0 30 chr5 68462019 68462036 -131168114 + AT_rich Low_complexity Low_complexity 15 32 0 1308 253 81 52 chr5 68462068 68462922 -131167228 - L2 LINE L2 -22 3291 2427 318 191 0 0 chr5 68464860 68464923 -131165227 - MIR SINE MIR -11 251 189 195 338 193 13 chr5 68465954 68466182 -131163968 - L2 LINE L2 -337 2977 2709 232 296 83 15 chr5 68466878 68467010 -131163140 + Charlie8 DNA MER1_type 1 141 -2276 2999 150 27 29 chr5 68467131 68467418 -131162732 + LTR45 LTR ERV1 1 288 -237 2417 36 7 7 chr5 68467418 68467697 -131162453 - AluY SINE Alu -15 296 18 2999 150 27 29 chr5 68467697 68467935 -131162215 + LTR45 LTR ERV1 288 525 0 2160 125 13 0 chr5 68468369 68468674 -131161476 + AluSx SINE Alu 1 309 -3 1792 109 0 109 chr5 68469110 68469432 -131160718 - AluSc SINE Alu -22 287 1 1188 168 77 77 chr5 68470276 68470562 -131159588 + AluJo SINE Alu 11 296 -16 2314 101 13 0 chr5 68472066 68472374 -131157776 + AluSx SINE Alu 1 312 0 189 107 0 0 chr5 68472544 68472572 -131157578 + (TG)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr5 68472571 68472591 -131157559 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 234 0 0 0 chr5 68472867 68472893 -131157257 + (TTA)n Simple_repeat Simple_repeat 3 28 0 16291 33 3 0 chr5 68472893 68475551 -131154599 - L1PA4 LINE L1 -18 6137 3466 23580 61 1 0 chr5 68475555 68478470 -131151680 - L1PA4 LINE L1 -3227 2919 4 183 327 28 47 chr5 68478673 68478780 -131151370 + MIR3 SINE MIR 13 117 -91 1922 252 68 69 chr5 68479028 68479932 -131150218 - L1M4 LINE L1 -2036 4110 3208 250 282 39 29 chr5 68480159 68480262 -131149888 - MIR SINE MIR -108 154 51 229 253 53 32 chr5 68480708 68480803 -131149347 - MIR SINE MIR -41 221 125 5311 74 13 6 chr5 68480936 68481622 -131148528 + LTR8 LTR ERV1 1 691 0 200 163 0 41 chr5 68482289 68482338 -131147812 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 256 61 82 0 chr5 68483837 68483886 -131146264 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 225 65 0 0 chr5 68483886 68483917 -131146233 + (CA)n Simple_repeat Simple_repeat 1 31 0 675 310 127 21 chr5 68485233 68485715 -131144435 - L2 LINE L2 -9 3304 2748 593 267 124 60 chr5 68485789 68486239 -131143911 + L1MC4 LINE L1 7522 8000 -42 834 240 53 0 chr5 68487257 68487464 -131142686 - MIR SINE MIR -4 258 40 388 233 62 75 chr5 68487803 68487908 -131142242 + MER112 DNA MER1_type 80 184 -76 2271 104 3 0 chr5 68487908 68488206 -131141944 + AluSq SINE Alu 1 299 -14 388 233 62 75 chr5 68488206 68488246 -131141904 + MER112 DNA MER1_type 184 223 -37 320 203 97 62 chr5 68488267 68488388 -131141762 - MIR SINE MIR -63 145 81 1111 217 117 35 chr5 68488772 68489173 -131140977 + Charlie4a DNA MER1_type 67 500 -8 395 274 111 42 chr5 68490911 68491101 -131139049 + LTR16C LTR ERVL 289 491 0 2471 51 3 32 chr5 68491125 68491436 -131138714 + AluY SINE Alu 1 302 -9 258 206 0 0 chr5 68491876 68491944 -131138206 + (TG)n Simple_repeat Simple_repeat 2 69 0 1142 200 14 5 chr5 68492275 68492495 -131137655 - MER58A DNA MER1_type 0 224 3 213 154 0 0 chr5 68493289 68493328 -131136822 + (TG)n Simple_repeat Simple_repeat 2 40 0 435 38 0 0 chr5 68493849 68493902 -131136248 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 246 62 0 0 chr5 68494561 68494593 -131135557 + (TG)n Simple_repeat Simple_repeat 2 33 0 292 355 65 14 chr5 68495242 68495380 -131134770 - MIR SINE MIR -70 192 48 183 184 0 0 chr5 68496541 68496579 -131133571 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 1564 144 8 0 chr5 68496599 68496835 -131133315 - AluJo SINE Alu -7 305 68 7387 20 0 1 chr5 68498063 68498962 -131131188 - L1PA3 LINE L1 -4 6151 5254 5443 28 18 0 chr5 68498980 68499693 -131130457 + L1P LINE L1 3739 4464 -1682 2354 10 16 0 chr5 68499793 68500096 -131130054 - L1P1 LINE L1 -594 5561 5254 12080 25 0 0 chr5 68500114 68501605 -131128545 + L1P1 LINE L1 3739 5229 -917 1642 121 60 66 chr5 68502128 68502460 -131127690 + THE1C LTR MaLR 1 330 -45 2384 203 65 0 chr5 68506296 68506773 -131123377 + MLT2B3 LTR ERVL 1 508 -46 483 63 0 0 chr5 68506792 68506855 -131123295 + (TTTTC)n Simple_repeat Simple_repeat 3 65 0 252 153 0 16 chr5 68506858 68506918 -131123232 + MLT2B1 LTR ERVL 408 520 0 639 315 6 0 chr5 68507152 68507330 -131122820 - MIR SINE MIR -43 219 41 362 321 61 20 chr5 68508320 68508516 -131121634 - MIR SINE MIR -19 243 40 914 276 133 40 chr5 68508585 68509326 -131120824 - L2 LINE L2 0 3313 2501 660 293 135 25 chr5 68510216 68510809 -131119341 + L1ME4a LINE L1 5310 5967 -154 2299 151 30 25 chr5 68510848 68511279 -131118871 - Tigger2a DNA MER2_type 0 434 2 1534 184 51 18 chr5 68511441 68511777 -131118373 + MER7A DNA MER2_type 1 345 -1 21 0 0 0 chr5 68613361 68613382 -131016768 + GC_rich Low_complexity Low_complexity 1 21 0 395 35 35 47 chr5 68614572 68614658 -131015492 + (TGAA)n Simple_repeat Simple_repeat 4 88 0 1203 47 12 6 chr5 68614659 68614831 -131015319 + (GAATG)n Satellite Satellite 3 175 0 1093 74 0 14 chr5 68614856 68615081 -131015069 + (GAATG)n Satellite Satellite 1 221 0 982 107 6 6 chr5 68615133 68615311 -131014839 + (GAATG)n Satellite Satellite 1 178 0 1040 107 0 7 chr5 68615322 68615550 -131014600 + (GAATG)n Satellite Satellite 1 406 0 879 91 5 48 chr5 68615561 68615747 -131014403 + (GAATG)n Satellite Satellite 3 180 0 1016 82 0 22 chr5 68615781 68615964 -131014186 + (GAATG)n Satellite Satellite 1 179 0 1236 43 0 33 chr5 68615975 68616196 -131013954 + (GAATG)n Satellite Satellite 1 213 0 897 145 0 0 chr5 68616208 68616387 -131013763 + (GAATG)n Satellite Satellite 1 179 0 1034 89 0 29 chr5 68616398 68616749 -131013401 + (GAATG)n Satellite Satellite 1 340 0 286 135 0 64 chr5 68616766 68616907 -131013243 + (GAATG)n Satellite Satellite 1 132 0 705 87 0 24 chr5 68617108 68617235 -131012915 + (GAATG)n Simple_repeat Simple_repeat 2 125 0 1053 70 10 10 chr5 68617432 68617632 -131012518 + (GAATG)n Satellite Satellite 1 200 0 1449 39 0 0 chr5 68617662 68617842 -131012308 + (GAATG)n Satellite Satellite 1 180 0 195 69 0 0 chr5 68617863 68617892 -131012258 + (GAATG)n Satellite Satellite 1 29 0 923 113 0 27 chr5 68617907 68618092 -131012058 + (GAATG)n Satellite Satellite 1 180 0 1287 95 0 2 chr5 68618108 68618461 -131011689 + (GAATG)n Satellite Satellite 1 532 0 1293 109 0 4 chr5 68618479 68619059 -131011091 + (GAATG)n Satellite Satellite 1 755 0 278 87 22 0 chr5 68619059 68619105 -131011045 + (TGGA)n Simple_repeat Simple_repeat 4 50 0 194 105 26 0 chr5 68619316 68619354 -131010796 + (GAATG)n Satellite Satellite 1 39 0 1160 103 0 31 chr5 68619373 68619850 -131010300 + (GAATG)n Satellite Satellite 1 636 0 1047 117 0 0 chr5 68619850 68620030 -131010120 + (GAATG)n Satellite Satellite 1 180 0 963 125 0 0 chr5 68620284 68620507 -131009643 + (GAATG)n Satellite Satellite 1 223 0 864 65 0 100 chr5 68620523 68620723 -131009427 + (GAATG)n Satellite Satellite 1 180 0 1053 128 0 6 chr5 68620734 68621032 -131009118 + (GAATG)n Satellite Satellite 3 473 0 1142 85 6 0 chr5 68621044 68621221 -131008929 + (GAATG)n Satellite Satellite 2 179 0 1124 71 0 6 chr5 68621233 68621402 -131008748 + (GAATG)n Satellite Satellite 2 169 0 1493 61 3 12 chr5 68621416 68621645 -131008505 + (GAATG)n Satellite Satellite 1 404 0 1135 84 6 6 chr5 68621645 68621824 -131008326 + (GAATG)n Satellite Satellite 2 180 0 1103 94 0 6 chr5 68621845 68622026 -131008124 + (GAATG)n Satellite Satellite 1 180 0 1137 121 3 14 chr5 68622142 68622509 -131007641 + (GAATG)n Satellite Satellite 1 362 0 1149 98 3 11 chr5 68622555 68623381 -131006769 + (GAATG)n Satellite Satellite 3 995 0 972 117 0 0 chr5 68623396 68623559 -131006591 + (GAATG)n Satellite Satellite 2 164 0 1068 71 0 0 chr5 68623611 68623766 -131006384 + (GAATG)n Satellite Satellite 2 156 0 1209 78 0 0 chr5 68623777 68623956 -131006194 + (GAATG)n Satellite Satellite 2 180 0 368 44 0 73 chr5 68623971 68624039 -131006111 + (GAATG)n Satellite Satellite 4 66 0 1050 105 0 0 chr5 68624053 68624225 -131005925 + (GAATG)n Satellite Satellite 2 173 0 756 99 0 73 chr5 68624239 68624476 -131005674 + (GAATG)n Satellite Satellite 1 219 0 1146 120 0 6 chr5 68624502 68624839 -131005311 + (GAATG)n Satellite Satellite 2 512 0 1044 111 0 0 chr5 68624850 68625030 -131005120 + (GAATG)n Satellite Satellite 1 180 0 886 95 0 53 chr5 68625060 68625250 -131004900 + (GAATG)n Satellite Satellite 1 180 0 1080 111 0 0 chr5 68625280 68625460 -131004690 + (GAATG)n Satellite Satellite 1 180 0 860 117 0 35 chr5 68625485 68625767 -131004383 + (GAATG)n Satellite Satellite 1 271 0 1026 110 0 0 chr5 68625781 68625954 -131004196 + (GAATG)n Satellite Satellite 2 174 0 755 151 0 22 chr5 68625969 68626148 -131004002 + (GAATG)n Satellite Satellite 2 176 0 945 126 0 0 chr5 68626160 68626335 -131003815 + (GAATG)n Satellite Satellite 5 179 0 1185 99 2 12 chr5 68626352 68626623 -131003527 + (GAATG)n Satellite Satellite 1 446 0 1026 122 0 0 chr5 68626623 68626803 -131003347 + (GAATG)n Satellite Satellite 1 180 0 1038 112 0 3 chr5 68627084 68627414 -131002736 + (GAATG)n Satellite Satellite 1 328 0 545 155 8 0 chr5 68627438 68627567 -131002583 + (GAATG)n Satellite Satellite 2 131 0 1152 140 0 0 chr5 68627598 68628017 -131002133 + (GAATG)n Satellite Satellite 1 419 0 953 118 6 0 chr5 68628033 68628211 -131001939 + (GAATG)n Satellite Satellite 2 180 0 1164 73 0 29 chr5 68628227 68628600 -131001550 + (GAATG)n Satellite Satellite 1 535 0 932 78 0 53 chr5 68628615 68628859 -131001291 + (GAATG)n Satellite Satellite 1 231 0 1204 87 0 36 chr5 68628877 68629322 -131000828 + (GAATG)n Satellite Satellite 1 429 0 1044 128 2 2 chr5 68629339 68629808 -131000342 + (GAATG)n Satellite Satellite 1 469 0 1089 106 0 0 chr5 68629824 68630004 -131000146 + (GAATG)n Satellite Satellite 1 180 0 1010 144 4 0 chr5 68630022 68630511 -130999639 + (GAATG)n Satellite Satellite 1 491 0 210 128 0 0 chr5 68630530 68630569 -130999581 + (GAATG)n Satellite Satellite 2 40 0 1104 126 1 13 chr5 68630586 68631014 -130999136 + (GAATG)n Satellite Satellite 2 649 -89 263 96 19 0 chr5 68631014 68631066 -130999084 + (CAATG)n Simple_repeat Simple_repeat 3 55 0 1104 126 1 13 chr5 68631066 68631155 -130998995 + (GAATG)n Satellite Satellite 649 738 0 1056 134 0 0 chr5 68631166 68631525 -130998625 + (GAATG)n Satellite Satellite 1 359 0 1392 112 0 8 chr5 68631536 68632785 -130997365 + (GAATG)n Satellite Satellite 1 1418 0 1064 92 0 6 chr5 68632797 68632961 -130997189 + (GAATG)n Satellite Satellite 2 164 0 1068 113 2 4 chr5 68632983 68633371 -130996779 + (GAATG)n Satellite Satellite 1 566 0 1056 135 0 10 chr5 68633397 68633830 -130996320 + (GAATG)n Satellite Satellite 1 428 0 667 105 5 68 chr5 68633841 68634032 -130996118 + (GAATG)n Satellite Satellite 2 180 0 1056 126 0 11 chr5 68634055 68634424 -130995726 + (GAATG)n Satellite Satellite 1 364 0 630 183 0 0 chr5 68634439 68634603 -130995547 + (GAATG)n Satellite Satellite 2 165 0 990 138 2 8 chr5 68634618 68634868 -130995282 + (GAATG)n Satellite Satellite 1 427 0 990 122 0 0 chr5 68634868 68635048 -130995102 + (GAATG)n Satellite Satellite 1 180 0 1155 98 0 0 chr5 68635084 68635422 -130994728 + (GAATG)n Satellite Satellite 1 338 0 590 127 4 45 chr5 68635438 68635719 -130994431 + (GAATG)n Satellite Satellite 1 269 0 850 112 6 6 chr5 68635736 68635897 -130994253 + (GAATG)n Satellite Satellite 4 164 0 888 131 0 0 chr5 68635931 68636318 -130993832 + (GAATG)n Satellite Satellite 1 387 0 876 144 0 0 chr5 68636330 68636503 -130993647 + (GAATG)n Satellite Satellite 2 174 0 1083 137 3 0 chr5 68636515 68636866 -130993284 + (GAATG)n Satellite Satellite 1 352 0 916 132 3 5 chr5 68636878 68637492 -130992658 + (GAATG)n Satellite Satellite 1 612 0 1146 94 0 21 chr5 68637507 68637870 -130992280 + (GAATG)n Satellite Satellite 2 528 0 1149 96 0 0 chr5 68637886 68638064 -130992086 + (GAATG)n Satellite Satellite 3 180 0 216 23 0 68 chr5 68638077 68638121 -130992029 + (GAATG)n Satellite Satellite 2 42 0 775 109 0 48 chr5 68638142 68638394 -130991756 + (GAATG)n Satellite Satellite 1 239 0 999 109 0 0 chr5 68638409 68638574 -130991576 + (GAATG)n Satellite Satellite 2 166 0 1002 107 0 26 chr5 68638588 68638898 -130991252 + (GAATG)n Satellite Satellite 1 473 0 1566 87 7 26 chr5 68639040 68639823 -130990327 + (CATTC)n Satellite Satellite 1 767 0 673 131 29 8 chr5 68639843 68640094 -130990056 + (CATTC)n Satellite Satellite 1 256 0 1077 79 6 17 chr5 68640125 68640302 -130989848 + (CATTC)n Satellite Satellite 2 176 0 1203 118 0 0 chr5 68640618 68641141 -130989009 + (CATTC)n Satellite Satellite 1 523 0 1169 100 4 39 chr5 68641153 68641942 -130988208 + (CATTC)n Satellite Satellite 1 761 0 1096 99 3 14 chr5 68641956 68642318 -130987832 + (CATTC)n Satellite Satellite 2 359 0 480 100 0 0 chr5 68642334 68642414 -130987736 + (CATTC)n Satellite Satellite 2 81 0 1176 97 3 29 chr5 68642429 68642797 -130987353 + (CATTC)n Satellite Satellite 2 359 0 827 126 0 27 chr5 68642818 68643001 -130987149 + (CATTC)n Satellite Satellite 2 179 0 917 127 0 6 chr5 68643017 68643198 -130986952 + (CATTC)n Satellite Satellite 1 180 0 1398 88 0 0 chr5 68643239 68643593 -130986557 + (CATTC)n Satellite Satellite 1 354 0 1359 62 3 3 chr5 68643604 68643928 -130986222 + (CATTC)n Satellite Satellite 1 325 0 198 128 0 0 chr5 68643939 68643978 -130986172 + (CATTC)n Satellite Satellite 2 40 0 955 89 0 28 chr5 68643997 68644177 -130985973 + (CATTC)n Satellite Satellite 3 177 0 214 63 0 95 chr5 68644192 68644255 -130985895 + (CATTC)n Satellite Satellite 4 60 0 480 110 7 71 chr5 68644280 68644434 -130985716 + (CATTC)n Satellite Satellite 1 144 0 1085 108 2 23 chr5 68644446 68645079 -130985071 + (CATTC)n Satellite Satellite 1 619 0 735 165 0 0 chr5 68645122 68645298 -130984852 + (CATTC)n Satellite Satellite 4 179 0 769 116 0 53 chr5 68645330 68645519 -130984631 + (CATTC)n Satellite Satellite 2 180 0 1031 111 0 6 chr5 68645539 68645719 -130984431 + (CATTC)n Satellite Satellite 1 179 0 1264 51 6 6 chr5 68645731 68645909 -130984241 + (CATTC)n Satellite Satellite 2 179 0 272 76 0 91 chr5 68645921 68645987 -130984163 + (CATTC)n Satellite Satellite 2 61 0 1299 112 0 0 chr5 68646002 68646352 -130983798 + (CATTC)n Satellite Satellite 1 350 0 963 134 0 0 chr5 68646385 68646564 -130983586 + (CATTC)n Satellite Satellite 2 180 0 682 149 6 6 chr5 68646575 68646743 -130983407 + (CATTC)n Satellite Satellite 2 169 0 1072 71 0 12 chr5 68646755 68646925 -130983225 + (CATTC)n Satellite Satellite 2 169 0 939 129 0 0 chr5 68646936 68647114 -130983036 + (CATTC)n Satellite Satellite 2 179 0 752 130 0 25 chr5 68647126 68647288 -130982862 + (CATTC)n Satellite Satellite 2 159 0 1057 112 4 4 chr5 68647300 68647543 -130982607 + (CATTC)n Satellite Satellite 1 243 0 923 108 0 6 chr5 68647555 68647721 -130982429 + (CATTC)n Satellite Satellite 2 166 0 231 36 0 0 chr5 68647757 68647785 -130982365 + (CATTC)n Satellite Satellite 3 30 0 227 30 0 30 chr5 68647797 68647830 -130982320 + (CATTC)n Satellite Satellite 3 34 0 942 108 0 51 chr5 68647843 68648406 -130981744 + (CATTC)n Satellite Satellite 1 534 0 1008 147 0 6 chr5 68648422 68648940 -130981210 + (CATTC)n Satellite Satellite 2 338 0 1135 111 5 32 chr5 68648961 68649564 -130980586 + (CATTC)n Satellite Satellite 1 586 0 1337 82 7 14 chr5 68649579 68649867 -130980283 + (CATTC)n Satellite Satellite 2 287 0 924 131 0 0 chr5 68649882 68650057 -130980093 + (CATTC)n Satellite Satellite 5 179 0 1437 83 0 33 chr5 68650069 68650930 -130979220 + (CATTC)n Satellite Satellite 1 832 0 384 176 23 0 chr5 68650941 68651072 -130979078 + (CATTC)n Satellite Satellite 3 136 0 1061 101 6 0 chr5 68651091 68651270 -130978880 + (CATTC)n Satellite Satellite 1 180 0 908 86 5 48 chr5 68651285 68651472 -130978678 + (CATTC)n Satellite Satellite 1 179 0 390 159 0 0 chr5 68651484 68651572 -130978578 + (CATTC)n Satellite Satellite 2 89 0 1181 98 6 4 chr5 68651584 68652097 -130978053 + (CATTC)n Satellite Satellite 1 514 0 1320 67 0 0 chr5 68652116 68652296 -130977854 + (CATTC)n Satellite Satellite 1 180 0 1338 109 2 29 chr5 68652337 68652895 -130977255 + (CATTC)n Satellite Satellite 1 543 0 335 98 5 104 chr5 68652933 68653126 -130977024 + (CATTC)n Satellite Satellite 4 177 0 882 90 11 53 chr5 68653276 68653464 -130976686 + (GAATG)n Satellite Satellite 1 180 0 324 133 0 0 chr5 68653507 68653567 -130976583 + (GAATG)n Satellite Satellite 3 62 0 297 0 0 0 chr5 68653631 68653664 -130976486 + (GAATG)n Satellite Satellite 2 34 0 1109 98 4 4 chr5 68653690 68654214 -130975936 + (GAATG)n Satellite Satellite 1 524 0 892 145 3 3 chr5 68654270 68654574 -130975576 + (GAATG)n Satellite Satellite 1 304 0 918 140 0 0 chr5 68654586 68654765 -130975385 + (GAATG)n Satellite Satellite 1 179 0 1167 121 3 14 chr5 68654791 68655253 -130974897 + (GAATG)n Satellite Satellite 1 639 0 993 92 0 32 chr5 68655253 68655438 -130974712 + (GAATG)n Satellite Satellite 2 180 0 1557 17 0 0 chr5 68655496 68655676 -130974474 + (GAATG)n Satellite Satellite 1 180 0 981 123 0 0 chr5 68655691 68655870 -130974280 + (GAATG)n Satellite Satellite 2 180 0 958 129 5 13 chr5 68655882 68656292 -130973858 + (GAATG)n Satellite Satellite 1 406 0 1113 96 0 0 chr5 68656314 68656492 -130973658 + (GAATG)n Satellite Satellite 2 179 0 922 95 0 53 chr5 68656508 68656698 -130973452 + (GAATG)n Satellite Satellite 1 180 0 423 100 0 0 chr5 68656717 68656787 -130973363 + (GAATG)n Satellite Satellite 2 71 0 819 149 0 0 chr5 68656799 68656967 -130973183 + (GAATG)n Satellite Satellite 2 169 0 883 119 4 40 chr5 68656979 68657269 -130972881 + (GAATG)n Satellite Satellite 1 279 0 1359 111 0 8 chr5 68657285 68657792 -130972358 + (GAATG)n Satellite Satellite 1 502 0 930 138 0 0 chr5 68657804 68657978 -130972172 + (GAATG)n Satellite Satellite 1 174 0 1167 114 2 4 chr5 68658007 68658354 -130971796 + (GAATG)n Satellite Satellite 2 525 0 1035 116 2 26 chr5 68658378 68658747 -130971403 + (GAATG)n Satellite Satellite 1 535 0 787 142 0 27 chr5 68658759 68658942 -130971208 + (GAATG)n Satellite Satellite 2 179 0 1086 100 0 0 chr5 68658963 68659143 -130971007 + (GAATG)n Satellite Satellite 1 180 0 1413 72 0 0 chr5 68659168 68659517 -130970633 + (GAATG)n Satellite Satellite 1 349 0 912 124 3 3 chr5 68659529 68659933 -130970217 + (GAATG)n Satellite Satellite 1 404 0 1037 137 0 3 chr5 68659964 68660328 -130969822 + (GAATG)n Satellite Satellite 1 362 0 707 105 0 35 chr5 68660344 68660487 -130969663 + (GAATG)n Satellite Satellite 2 139 0 1104 92 0 0 chr5 68660499 68660662 -130969488 + (GAATG)n Satellite Satellite 2 164 0 452 40 0 66 chr5 68660684 68660760 -130969390 + (GAATG)n Satellite Satellite 4 74 0 1044 106 0 0 chr5 68660774 68660953 -130969197 + (GAATG)n Satellite Satellite 1 179 0 1080 106 0 0 chr5 68660969 68661148 -130969002 + (GAATG)n Satellite Satellite 2 180 0 755 151 0 22 chr5 68661163 68661342 -130968808 + (GAATG)n Satellite Satellite 2 176 0 836 146 6 0 chr5 68661354 68661532 -130968618 + (GAATG)n Satellite Satellite 1 179 0 1113 106 0 0 chr5 68661557 68661737 -130968413 + (GAATG)n Satellite Satellite 1 180 0 979 144 5 3 chr5 68661752 68662374 -130967776 + (GAATG)n Satellite Satellite 1 623 0 918 72 0 77 chr5 68662390 68662585 -130967565 + (GAATG)n Satellite Satellite 1 180 0 680 107 6 36 chr5 68662602 68662770 -130967380 + (GAATG)n Satellite Satellite 2 164 0 239 53 0 26 chr5 68662783 68662821 -130967329 + (GAATG)n Satellite Satellite 3 39 0 714 125 12 40 chr5 68662878 68663211 -130966939 + (GAATG)n Satellite Satellite 1 323 0 1491 38 0 6 chr5 68663227 68663678 -130966472 + (GAATG)n Satellite Satellite 1 493 0 1090 94 6 6 chr5 68663694 68663874 -130966276 + (GAATG)n Satellite Satellite 1 180 0 1442 33 0 16 chr5 68663899 68664406 -130965744 + (GAATG)n Satellite Satellite 1 498 0 1466 54 3 10 chr5 68664418 68664934 -130965216 + (GAATG)n Satellite Satellite 2 691 0 1146 90 0 0 chr5 68664945 68665123 -130965027 + (GAATG)n Satellite Satellite 1 178 0 210 128 0 0 chr5 68665138 68665177 -130964973 + (GAATG)n Satellite Satellite 2 40 0 1362 82 0 7 chr5 68665188 68665550 -130964600 + (GAATG)n Satellite Satellite 1 538 0 1175 114 3 17 chr5 68665562 68666017 -130964133 + (GAATG)n Satellite Satellite 2 624 0 949 90 0 48 chr5 68666033 68666221 -130963929 + (GAATG)n Satellite Satellite 2 180 0 1125 119 4 8 chr5 68666237 68666779 -130963371 + (GAATG)n Satellite Satellite 1 718 0 694 140 6 6 chr5 68666795 68666952 -130963198 + (GAATG)n Satellite Satellite 4 160 0 951 123 0 0 chr5 68666966 68667129 -130963021 + (GAATG)n Satellite Satellite 2 164 0 1292 109 0 3 chr5 68667144 68667495 -130962655 + (GAATG)n Satellite Satellite 1 349 0 903 141 0 19 chr5 68667509 68667874 -130962276 + (GAATG)n Satellite Satellite 1 534 0 1557 72 1 0 chr5 68667892 68668598 -130961552 + (GAATG)n Satellite Satellite 1 707 0 994 116 3 17 chr5 68668636 68669164 -130960986 + (GAATG)n Satellite Satellite 1 700 0 907 117 12 0 chr5 68669378 68669549 -130960601 + (GAATG)n Satellite Satellite 4 176 0 1113 129 3 7 chr5 68669577 68670596 -130959554 + (GAATG)n Satellite Satellite 1 1193 0 1287 111 0 10 chr5 68670611 68671011 -130959139 + (GAATG)n Satellite Satellite 1 395 0 1226 80 0 18 chr5 68671046 68671412 -130958738 + (GAATG)n Satellite Satellite 3 536 0 990 110 0 0 chr5 68671438 68671611 -130958539 + (GAATG)n Satellite Satellite 2 174 0 1104 92 0 0 chr5 68671623 68671786 -130958364 + (GAATG)n Satellite Satellite 2 164 0 1118 86 0 54 chr5 68671817 68672397 -130957753 + (GAATG)n Satellite Satellite 1 725 0 339 25 0 0 chr5 68672420 68672460 -130957690 + (GAATG)n Satellite Satellite 2 41 0 1056 106 0 0 chr5 68672481 68672660 -130957490 + (GAATG)n Satellite Satellite 2 180 0 967 125 0 17 chr5 68672674 68673040 -130957110 + (GAATG)n Satellite Satellite 1 359 0 882 83 6 30 chr5 68673063 68673232 -130956918 + (GAATG)n Satellite Satellite 3 167 0 1266 86 0 45 chr5 68673259 68673556 -130956594 + (GAATG)n Satellite Satellite 1 449 0 1266 69 0 0 chr5 68673556 68673730 -130956420 + (GAATG)n Satellite Satellite 2 175 0 1194 117 1 16 chr5 68673837 68674256 -130955894 + (GAATG)n Satellite Satellite 1 588 0 1194 90 0 0 chr5 68674256 68674434 -130955716 + (GAATG)n Satellite Satellite 2 179 0 1134 121 2 4 chr5 68674706 68675078 -130955072 + (GAATG)n Satellite Satellite 2 549 0 1452 97 5 26 chr5 68675094 68676231 -130953919 + (GAATG)n Satellite Satellite 1 1288 0 1218 85 0 0 chr5 68676243 68676420 -130953730 + (GAATG)n Satellite Satellite 3 179 0 1035 135 0 2 chr5 68676442 68676801 -130953349 + (GAATG)n Satellite Satellite 1 538 0 1253 56 0 6 chr5 68676822 68677002 -130953148 + (GAATG)n Satellite Satellite 2 180 0 969 123 0 0 chr5 68677013 68677192 -130952958 + (GAATG)n Satellite Satellite 2 180 0 1377 61 0 0 chr5 68677213 68677393 -130952757 + (GAATG)n Satellite Satellite 1 180 0 1374 114 1 8 chr5 68677409 68678257 -130951893 + (GAATG)n Satellite Satellite 1 1021 0 1101 106 0 0 chr5 68678257 68678437 -130951713 + (GAATG)n Satellite Satellite 1 180 0 247 132 0 79 chr5 68679129 68679205 -130950945 + (CGGAA)n Simple_repeat Simple_repeat 2 71 0 1378 49 2 24 chr5 68679207 68679569 -130950581 + (GAATG)n Satellite Satellite 2 526 0 986 121 4 18 chr5 68679704 68680010 -130950140 + (GAATG)n Satellite Satellite 3 477 0 680 116 18 24 chr5 68680230 68680394 -130949756 + (CATTC)n Satellite Satellite 4 166 0 934 107 11 0 chr5 68680407 68680584 -130949566 + (CATTC)n Satellite Satellite 2 180 0 1019 106 0 6 chr5 68680609 68680788 -130949362 + (CATTC)n Satellite Satellite 2 179 0 865 113 12 0 chr5 68680805 68680973 -130949177 + (CATTC)n Satellite Satellite 2 171 0 1176 106 0 18 chr5 68681002 68681567 -130948583 + (CATTC)n Satellite Satellite 1 554 0 1089 135 4 2 chr5 68681583 68682104 -130948046 + (CATTC)n Satellite Satellite 1 522 0 1122 138 0 2 chr5 68682120 68682758 -130947392 + (CATTC)n Satellite Satellite 1 636 0 567 117 0 0 chr5 68682771 68682874 -130947276 + (CATTC)n Satellite Satellite 3 105 0 813 144 0 0 chr5 68682896 68683056 -130947094 + (CATTC)n Satellite Satellite 3 162 0 1085 37 0 58 chr5 68683144 68683335 -130946815 + (CATTC)n Satellite Satellite 1 180 0 273 105 0 40 chr5 68683359 68683435 -130946715 + (CATTC)n Satellite Satellite 2 74 0 1054 89 6 6 chr5 68683463 68683642 -130946508 + (CATTC)n Satellite Satellite 1 179 0 969 152 0 4 chr5 68683654 68683929 -130946221 + (CATTC)n Satellite Satellite 2 275 0 1260 79 0 0 chr5 68683943 68684121 -130946029 + (CATTC)n Satellite Satellite 2 179 0 1293 114 0 21 chr5 68684133 68684497 -130945653 + (CATTC)n Satellite Satellite 2 357 0 1023 69 5 28 chr5 68684513 68684736 -130945414 + (CATTC)n Satellite Satellite 1 217 0 983 111 0 6 chr5 68684752 68684932 -130945218 + (CATTC)n Satellite Satellite 1 179 0 242 28 0 28 chr5 68684957 68684993 -130945157 + (CATTC)n Satellite Satellite 2 36 0 981 58 5 58 chr5 68685009 68685198 -130944952 + (CATTC)n Satellite Satellite 2 180 0 993 141 1 1 chr5 68685219 68685946 -130944204 + (CATTC)n Satellite Satellite 1 727 0 840 151 0 0 chr5 68685962 68686141 -130944009 + (CATTC)n Satellite Satellite 1 179 0 848 130 0 27 chr5 68686157 68686342 -130943808 + (CATTC)n Satellite Satellite 1 180 0 711 169 0 0 chr5 68686358 68686535 -130943615 + (CATTC)n Satellite Satellite 2 178 0 207 69 0 0 chr5 68686645 68686674 -130943476 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 718 123 0 26 chr5 68686745 68686900 -130943250 + (CATTC)n Satellite Satellite 1 151 0 1096 83 0 11 chr5 68686915 68687096 -130943054 + (CATTC)n Satellite Satellite 2 180 0 237 33 0 0 chr5 68687127 68687157 -130942993 + (CATTC)n Satellite Satellite 5 34 0 1142 43 0 31 chr5 68687170 68687436 -130942714 + (CATTC)n Satellite Satellite 1 257 0 298 53 0 84 chr5 68687454 68687549 -130942601 + (CATTC)n Satellite Satellite 3 89 0 279 54 0 0 chr5 68687609 68687646 -130942504 + (CATTC)n Satellite Satellite 3 39 0 1166 81 0 20 chr5 68687663 68687958 -130942192 + (CATTC)n Satellite Satellite 1 289 0 1089 132 1 7 chr5 68687992 68688682 -130941468 + (GAATG)n Satellite Satellite 1 863 0 927 129 0 0 chr5 68688682 68688860 -130941290 + (GAATG)n Satellite Satellite 2 179 0 977 120 2 19 chr5 68689004 68689349 -130940801 + (GAATG)n Satellite Satellite 2 515 0 797 159 11 0 chr5 68689361 68689537 -130940613 + (GAATG)n Satellite Satellite 2 179 0 680 148 5 0 chr5 68689549 68689766 -130940384 + (GAATG)n Satellite Satellite 1 218 0 819 147 0 0 chr5 68689778 68689941 -130940209 + (GAATG)n Satellite Satellite 2 164 0 692 169 6 0 chr5 68689957 68690135 -130940015 + (GAATG)n Satellite Satellite 2 180 0 1132 93 3 3 chr5 68690176 68690536 -130939614 + (GAATG)n Satellite Satellite 1 360 0 998 112 6 0 chr5 68690561 68690739 -130939411 + (GAATG)n Satellite Satellite 2 180 0 636 138 0 0 chr5 68690769 68690899 -130939251 + (GAATG)n Satellite Satellite 2 131 0 906 134 0 18 chr5 68690910 68691414 -130938736 + (GAATG)n Satellite Satellite 1 495 0 891 147 0 12 chr5 68691425 68691748 -130938402 + (GAATG)n Satellite Satellite 1 487 0 1059 112 0 0 chr5 68691759 68691938 -130938212 + (GAATG)n Satellite Satellite 2 180 0 865 115 6 27 chr5 68691949 68692132 -130938018 + (GAATG)n Satellite Satellite 2 180 0 1068 118 0 0 chr5 68692149 68692388 -130937762 + (GAATG)n Satellite Satellite 1 239 0 1280 55 4 38 chr5 68692408 68692777 -130937373 + (GAATG)n Satellite Satellite 2 518 0 1140 123 2 8 chr5 68692803 68693285 -130936865 + (GAATG)n Satellite Satellite 2 653 0 1189 73 6 6 chr5 68693331 68693510 -130936640 + (GAATG)n Satellite Satellite 2 180 0 862 143 0 29 chr5 68693531 68693834 -130936316 + (GAATG)n Satellite Satellite 1 294 0 745 132 6 28 chr5 68693846 68694028 -130936122 + (GAATG)n Satellite Satellite 2 179 0 1102 87 3 29 chr5 68694043 68694462 -130935688 + (GAATG)n Satellite Satellite 2 582 0 1284 67 0 0 chr5 68694473 68694653 -130935497 + (GAATG)n Satellite Satellite 1 180 0 512 148 8 0 chr5 68694669 68694791 -130935359 + (GAATG)n Satellite Satellite 2 124 0 1247 90 0 11 chr5 68694808 68695168 -130934982 + (GAATG)n Satellite Satellite 2 532 0 1017 128 0 0 chr5 68695180 68695360 -130934790 + (GAATG)n Satellite Satellite 1 180 0 1186 101 2 29 chr5 68695376 68695944 -130934206 + (GAATG)n Satellite Satellite 1 552 0 1064 120 2 4 chr5 68695956 68696285 -130933865 + (GAATG)n Satellite Satellite 3 507 0 1406 75 2 17 chr5 68696297 68697054 -130933096 + (GAATG)n Satellite Satellite 1 924 0 1362 22 0 17 chr5 68697054 68697235 -130932915 + (GAATG)n Satellite Satellite 2 179 0 839 114 0 24 chr5 68697505 68697672 -130932478 + (GAATG)n Satellite Satellite 2 164 0 1034 83 0 5 chr5 68697683 68697897 -130932253 + (GAATG)n Satellite Satellite 1 212 0 1161 93 0 15 chr5 68697910 68698423 -130931727 + (GAATG)n Satellite Satellite 1 538 0 252 59 0 0 chr5 68698423 68698457 -130931693 + (GAATG)n Satellite Satellite 2 35 0 1045 99 0 11 chr5 68698488 68698669 -130931481 + (GAATG)n Satellite Satellite 2 180 0 927 82 2 58 chr5 68698930 68699262 -130930888 + (GAATG)n Satellite Satellite 1 496 0 841 110 6 23 chr5 68699276 68699449 -130930701 + (GAATG)n Satellite Satellite 2 171 0 884 146 6 0 chr5 68699461 68699797 -130930353 + (GAATG)n Satellite Satellite 1 338 0 1099 89 6 6 chr5 68699818 68699998 -130930152 + (GAATG)n Satellite Satellite 1 180 0 398 43 0 71 chr5 68700017 68700087 -130930063 + (GAATG)n Satellite Satellite 2 66 0 1224 100 3 27 chr5 68700109 68700482 -130929668 + (GAATG)n Satellite Satellite 1 364 0 1233 125 0 2 chr5 68700512 68700996 -130929154 + (GAATG)n Satellite Satellite 1 662 0 1134 111 3 0 chr5 68701011 68701415 -130928735 + (GAATG)n Satellite Satellite 1 405 0 972 138 0 4 chr5 68701426 68701955 -130928195 + (GAATG)n Satellite Satellite 2 704 0 1296 67 0 0 chr5 68701966 68702146 -130928004 + (GAATG)n Satellite Satellite 1 180 0 1056 97 0 0 chr5 68702166 68702381 -130927769 + (GAATG)n Satellite Satellite 1 215 0 803 124 0 24 chr5 68702410 68702629 -130927521 + (GAATG)n Satellite Satellite 1 213 0 984 119 0 0 chr5 68702641 68702818 -130927332 + (GAATG)n Satellite Satellite 3 179 0 1199 91 0 25 chr5 68702835 68703245 -130926905 + (GAATG)n Satellite Satellite 1 576 0 1199 72 0 6 chr5 68703245 68703426 -130926724 + (GAATG)n Satellite Satellite 1 180 0 1241 99 0 4 chr5 68703861 68704141 -130926009 + (GAATG)n Satellite Satellite 1 278 0 1094 99 0 6 chr5 68704167 68704348 -130925802 + (GAATG)n Satellite Satellite 1 180 0 1052 99 0 75 chr5 68704371 68704750 -130925400 + (GAATG)n Satellite Satellite 1 350 0 706 152 0 27 chr5 68704771 68704955 -130925195 + (GAATG)n Satellite Satellite 2 180 0 918 138 0 0 chr5 68704967 68705141 -130925009 + (GAATG)n Satellite Satellite 1 174 0 1110 108 0 0 chr5 68705167 68705506 -130924644 + (GAATG)n Satellite Satellite 1 339 0 1066 104 4 4 chr5 68705518 68705761 -130924389 + (GAATG)n Satellite Satellite 1 243 0 788 134 0 23 chr5 68705773 68705945 -130924205 + (GAATG)n Satellite Satellite 2 169 0 831 157 3 0 chr5 68705957 68706359 -130923791 + (GAATG)n Satellite Satellite 1 403 0 1201 85 6 3 chr5 68706400 68706736 -130923414 + (GAATG)n Satellite Satellite 1 337 0 771 154 0 0 chr5 68706764 68706933 -130923217 + (GAATG)n Satellite Satellite 2 170 0 712 137 6 28 chr5 68706945 68707127 -130923023 + (GAATG)n Satellite Satellite 2 179 0 645 131 0 0 chr5 68707142 68707272 -130922878 + (GAATG)n Satellite Satellite 2 131 0 1131 78 6 11 chr5 68707284 68707463 -130922687 + (GAATG)n Satellite Satellite 2 179 0 1277 78 3 0 chr5 68707474 68707843 -130922307 + (GAATG)n Satellite Satellite 1 370 0 1116 109 2 6 chr5 68707868 68708545 -130921605 + (GAATG)n Satellite Satellite 1 673 0 653 145 0 26 chr5 68708560 68708712 -130921438 + (GAATG)n Satellite Satellite 4 151 0 965 89 13 0 chr5 68708740 68708898 -130921252 + (GAATG)n Satellite Satellite 1 160 0 1050 136 0 0 chr5 68708938 68709281 -130920869 + (GAATG)n Satellite Satellite 1 343 0 944 144 0 11 chr5 68709293 68709747 -130920403 + (GAATG)n Satellite Satellite 1 448 0 771 154 0 0 chr5 68709777 68709946 -130920204 + (GAATG)n Satellite Satellite 2 170 0 678 139 11 22 chr5 68709958 68710138 -130920012 + (GAATG)n Satellite Satellite 2 179 0 250 83 17 50 chr5 68710151 68710211 -130919939 + (GAATG)n Satellite Satellite 4 61 0 192 40 0 0 chr5 68710211 68710236 -130919914 + (TGGA)n Simple_repeat Simple_repeat 1 25 0 780 120 5 33 chr5 68710430 68710614 -130919536 + (GAATG)n Satellite Satellite 2 180 0 1127 88 8 21 chr5 68710692 68711243 -130918907 + (GAATG)n Satellite Satellite 1 721 0 1000 87 6 6 chr5 68711267 68711439 -130918711 + (GAATG)n Satellite Satellite 2 173 0 1139 114 1 17 chr5 68711484 68712101 -130918049 + (GAATG)n Satellite Satellite 2 784 0 1256 91 3 14 chr5 68712139 68712664 -130917486 + (GAATG)n Satellite Satellite 1 698 0 1056 106 0 0 chr5 68712685 68712864 -130917286 + (GAATG)n Satellite Satellite 2 180 0 713 167 6 0 chr5 68712879 68713053 -130917097 + (GAATG)n Satellite Satellite 2 176 0 1128 101 0 0 chr5 68713065 68713243 -130916907 + (GAATG)n Satellite Satellite 2 179 0 1227 123 0 0 chr5 68713258 68713593 -130916557 + (GAATG)n Satellite Satellite 1 335 0 1047 134 2 0 chr5 68713608 68714032 -130916118 + (GAATG)n Satellite Satellite 1 425 0 1068 128 0 14 chr5 68714044 68714332 -130915818 + (GAATG)n Satellite Satellite 1 284 0 882 129 0 0 chr5 68714363 68714526 -130915624 + (GAATG)n Satellite Satellite 2 164 0 949 90 0 48 chr5 68714542 68714730 -130915420 + (GAATG)n Satellite Satellite 2 180 0 995 129 7 10 chr5 68714745 68715185 -130914965 + (GAATG)n Satellite Satellite 1 617 0 1084 114 2 19 chr5 68715198 68715843 -130914307 + (GAATG)n Satellite Satellite 1 633 0 379 162 0 40 chr5 68715857 68716005 -130914145 + (GAATG)n Satellite Satellite 3 144 0 247 62 0 42 chr5 68716082 68716130 -130914020 + (GAATG)n Simple_repeat Simple_repeat 2 47 0 192 40 0 0 chr5 68716311 68716336 -130913814 + (CATTC)n Simple_repeat Simple_repeat 4 28 0 243 164 0 0 chr5 68716367 68716428 -130913722 + (CATTC)n Simple_repeat Simple_repeat 2 62 0 280 141 0 91 chr5 68716528 68716726 -130913424 + (CATTC)n Satellite Satellite 1 180 0 1221 126 3 0 chr5 68716801 68717150 -130913000 + (CATTC)n Satellite Satellite 1 350 0 1350 102 0 14 chr5 68717169 68718522 -130911628 + (CATTC)n Satellite Satellite 1 1333 0 1128 113 0 39 chr5 68718534 68718962 -130911188 + (CATTC)n Satellite Satellite 1 411 0 1287 67 0 0 chr5 68718978 68719157 -130910993 + (CATTC)n Satellite Satellite 2 180 0 957 102 0 0 chr5 68719170 68719327 -130910823 + (CATTC)n Satellite Satellite 4 160 0 1119 138 0 3 chr5 68719402 68719756 -130910394 + (CATTC)n Satellite Satellite 1 352 0 938 128 10 23 chr5 68719771 68720246 -130909904 + (CATTC)n Satellite Satellite 2 293 0 1376 39 6 0 chr5 68720262 68720441 -130909709 + (CATTC)n Satellite Satellite 1 180 0 1095 125 1 26 chr5 68720455 68721443 -130908707 + (CATTC)n Satellite Satellite 1 963 0 1040 124 3 14 chr5 68721454 68721822 -130908328 + (CATTC)n Satellite Satellite 1 364 0 990 101 0 0 chr5 68721858 68722016 -130908134 + (CATTC)n Satellite Satellite 2 159 0 1366 82 0 20 chr5 68722027 68722325 -130907825 + (CATTC)n Satellite Satellite 1 291 0 1331 49 7 7 chr5 68722341 68722756 -130907394 + (CATTC)n Satellite Satellite 1 415 0 651 146 0 0 chr5 68722771 68722901 -130907249 + (CATTC)n Satellite Satellite 2 131 0 965 146 8 8 chr5 68722907 68723386 -130906764 + (GAATG)n Satellite Satellite 1 479 0 1062 122 0 0 chr5 68723416 68724022 -130906128 + (GAATG)n Satellite Satellite 1 606 0 811 111 0 58 chr5 68724064 68724254 -130905896 + (GAATG)n Satellite Satellite 1 179 0 903 134 0 0 chr5 68724270 68724449 -130905701 + (GAATG)n Satellite Satellite 1 179 0 1327 69 0 21 chr5 68724465 68724768 -130905382 + (GAATG)n Satellite Satellite 1 296 0 1035 128 0 6 chr5 68724787 68725092 -130905058 + (GAATG)n Satellite Satellite 1 480 0 951 134 0 0 chr5 68725104 68725283 -130904867 + (GAATG)n Satellite Satellite 1 179 0 1068 120 2 2 chr5 68725298 68725727 -130904423 + (GAATG)n Satellite Satellite 1 429 0 993 129 2 9 chr5 68725743 68726221 -130903929 + (GAATG)n Satellite Satellite 1 653 0 998 62 0 72 chr5 68726237 68726431 -130903719 + (GAATG)n Satellite Satellite 1 180 0 1061 96 0 5 chr5 68726447 68726663 -130903487 + (GAATG)n Satellite Satellite 1 214 0 978 102 11 6 chr5 68726690 68726867 -130903283 + (GAATG)n Satellite Satellite 1 178 0 1059 113 0 13 chr5 68726937 68727456 -130902694 + (GAATG)n Satellite Satellite 1 515 0 1442 59 3 3 chr5 68727272 68727641 -130902509 + (GAATG)n Satellite Satellite 1 369 0 776 141 0 18 chr5 68727656 68727881 -130902269 + (GAATG)n Satellite Satellite 1 220 0 503 105 5 68 chr5 68727916 68728107 -130902043 + (GAATG)n Satellite Satellite 2 180 0 209 146 21 0 chr5 68728118 68728166 -130901984 + (GAATG)n Satellite Satellite 2 50 0 1113 96 0 0 chr5 68728188 68728366 -130901784 + (GAATG)n Satellite Satellite 2 179 0 1066 106 4 13 chr5 68728381 68728729 -130901421 + (GAATG)n Satellite Satellite 2 522 0 230 98 45 113 chr5 68728943 68729077 -130901073 + (GACTG)n Simple_repeat Simple_repeat 1 124 0 770 125 5 0 chr5 68729174 68729382 -130900768 + (GAATG)n Satellite Satellite 1 209 0 288 81 40 40 chr5 68729551 68729625 -130900525 + (GAATG)n Satellite Satellite 3 76 0 751 116 0 53 chr5 68729654 68729844 -130900306 + (GAATG)n Satellite Satellite 1 180 0 1097 85 5 27 chr5 68729884 68730261 -130899889 + (GAATG)n Satellite Satellite 1 369 0 585 28 0 0 chr5 68730282 68730353 -130899797 + (GAATG)n Satellite Satellite 2 72 0 352 119 0 24 chr5 68730386 68730470 -130899680 + (GCATG)n Simple_repeat Simple_repeat 3 84 0 263 95 0 54 chr5 68730491 68730565 -130899585 + (CAATG)n Simple_repeat Simple_repeat 5 74 0 993 118 0 0 chr5 68730892 68731070 -130899080 + (GAATG)n Satellite Satellite 1 178 0 851 129 0 6 chr5 68731095 68731265 -130898885 + (GAATG)n Satellite Satellite 2 170 0 1044 122 1 20 chr5 68731276 68731912 -130898238 + (GAATG)n Satellite Satellite 2 794 0 1317 106 2 3 chr5 68731950 68732535 -130897615 + (GAATG)n Satellite Satellite 1 952 0 1317 67 0 0 chr5 68732535 68732904 -130897246 + (GAATG)n Satellite Satellite 1 369 0 1056 123 0 9 chr5 68733019 68733573 -130896577 + (GAATG)n Satellite Satellite 1 549 0 318 147 0 0 chr5 68733590 68733658 -130896492 + (GAATG)n Satellite Satellite 2 69 0 1191 94 0 0 chr5 68733669 68733849 -130896301 + (GAATG)n Satellite Satellite 1 180 0 969 123 0 0 chr5 68733889 68734068 -130896082 + (GAATG)n Satellite Satellite 2 180 0 1053 122 0 2 chr5 68734089 68734445 -130895705 + (GAATG)n Satellite Satellite 5 532 0 946 117 6 6 chr5 68734500 68734857 -130895293 + (GAATG)n Satellite Satellite 1 357 0 1071 130 2 10 chr5 68734872 68735162 -130894988 + (GAATG)n Satellite Satellite 1 465 0 1071 112 0 0 chr5 68735162 68735341 -130894809 + (GAATG)n Satellite Satellite 2 180 0 1178 56 0 6 chr5 68735612 68735772 -130894378 + (GAATG)n Satellite Satellite 2 160 0 799 62 0 72 chr5 68735790 68735984 -130894166 + (GAATG)n Satellite Satellite 1 180 0 421 155 9 9 chr5 68736021 68736137 -130894013 + (GAATG)n Satellite Satellite 5 120 0 258 95 0 0 chr5 68736202 68736244 -130893906 + (TGGA)n Simple_repeat Simple_repeat 4 45 0 389 109 0 83 chr5 68736439 68736595 -130893555 + (GAATG)n Satellite Satellite 5 147 0 1159 41 0 54 chr5 68736619 68737095 -130893055 + (GAATG)n Satellite Satellite 1 450 0 1122 116 2 14 chr5 68737171 68737468 -130892682 + (GAATG)n Satellite Satellite 1 471 0 1099 95 4 31 chr5 68737479 68737854 -130892296 + (GAATG)n Satellite Satellite 1 540 0 1137 108 2 22 chr5 68737884 68738328 -130891822 + (GAATG)n Satellite Satellite 1 435 0 1419 39 0 0 chr5 68738355 68738533 -130891617 + (GAATG)n Satellite Satellite 2 179 0 1104 101 0 0 chr5 68738549 68738727 -130891423 + (GAATG)n Satellite Satellite 3 180 0 1041 114 1 5 chr5 68738760 68739592 -130890558 + (GAATG)n Satellite Satellite 1 829 0 958 123 7 9 chr5 68739603 68739961 -130890189 + (GAATG)n Satellite Satellite 2 536 0 1035 115 2 4 chr5 68739976 68740239 -130889911 + (GAATG)n Satellite Satellite 2 440 0 953 117 0 6 chr5 68740302 68740481 -130889669 + (GAATG)n Satellite Satellite 2 179 0 1149 96 0 0 chr5 68740492 68740670 -130889480 + (GAATG)n Satellite Satellite 3 180 0 900 111 0 0 chr5 68740682 68740835 -130889315 + (GAATG)n Satellite Satellite 3 155 0 713 114 8 0 chr5 68740853 68740985 -130889165 + (GAATG)n Satellite Satellite 2 134 0 1357 39 0 11 chr5 68741000 68741182 -130888968 + (GAATG)n Satellite Satellite 1 180 0 928 118 6 6 chr5 68741198 68741376 -130888774 + (GAATG)n Satellite Satellite 3 180 0 446 301 10 25 chr5 68843659 68843862 -130786288 + MLT1I LTR MaLR 10 209 -200 263 286 95 19 chr5 68844152 68844257 -130785893 + MIR3 SINE MIR 81 193 -15 481 317 7 0 chr5 68844543 68844685 -130785465 + L2 LINE L2 3169 3311 -2 240 93 0 23 chr5 68844966 68845009 -130785141 + L1PA15 LINE L1 1800 1841 -4305 2248 97 3 3 chr5 68845011 68845301 -130784849 - AluY SINE Alu -21 290 1 8608 195 15 11 chr5 68845302 68846312 -130783838 + L1PA15 LINE L1 1828 2832 -3333 1435 120 0 0 chr5 68846312 68846528 -130783622 + L1PA14 LINE L1 5944 6159 -2 8608 195 15 11 chr5 68846528 68847580 -130782570 + L1PA15 LINE L1 2832 3878 -2287 2004 110 7 18 chr5 68847580 68847861 -130782289 + AluSx SINE Alu 6 283 -29 201 74 0 0 chr5 68847861 68847888 -130782262 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 8608 195 15 11 chr5 68847888 68850045 -130780105 + L1PA15 LINE L1 3877 6163 -2 1800 180 10 0 chr5 68851414 68851714 -130778436 + AluJo SINE Alu 1 303 -9 30 77 0 0 chr5 68851985 68852050 -130778100 + AT_rich Low_complexity Low_complexity 1 65 0 275 200 0 0 chr5 68852125 68852170 -130777980 + L2 LINE L2 3205 3249 -23 2040 94 69 0 chr5 68852338 68852614 -130777536 - AluSq SINE Alu -9 304 10 405 95 0 0 chr5 68853105 68853168 -130776982 + (TG)n Simple_repeat Simple_repeat 2 64 0 4365 133 188 51 chr5 68854003 68855313 -130774837 + pTR5 LTR ERV1 743 2438 0 21 36 0 0 chr5 68856431 68856459 -130773691 + AT_rich Low_complexity Low_complexity 1 28 0 1826 135 42 68 chr5 68856624 68857009 -130773141 + THE1C LTR MaLR 1 375 0 2085 154 0 0 chr5 68857014 68857313 -130772837 - AluSx SINE Alu -13 299 1 830 183 0 0 chr5 68858591 68858760 -130771390 + L1MA3 LINE L1 6137 6305 0 216 0 0 0 chr5 68859420 68859444 -130770706 + (T)n Simple_repeat Simple_repeat 1 24 0 215 273 45 15 chr5 68859679 68859745 -130770405 - MIR SINE MIR -87 175 108 1780 106 0 4 chr5 68859997 68860234 -130769916 + AluSx SINE Alu 1 236 -76 24 0 0 0 chr5 68860374 68860398 -130769752 + AT_rich Low_complexity Low_complexity 1 24 0 216 219 0 47 chr5 68860919 68860983 -130769167 + (TA)n Simple_repeat Simple_repeat 2 62 0 301 176 10 108 chr5 68860988 68861090 -130769060 - L1MC4 LINE L1 -1337 6705 6614 458 94 0 170 chr5 68861095 68861491 -130768659 + (TA)n Simple_repeat Simple_repeat 1 328 0 492 89 0 119 chr5 68861511 68861713 -130768437 + (TA)n Simple_repeat Simple_repeat 2 179 0 437 52 0 164 chr5 68861729 68861942 -130768208 + (TA)n Simple_repeat Simple_repeat 2 179 0 265 70 0 177 chr5 68861988 68862536 -130767614 + (TA)n Simple_repeat Simple_repeat 1 450 0 192 92 0 138 chr5 68862580 68862710 -130767440 + (TA)n Simple_repeat Simple_repeat 2 113 0 335 103 0 0 chr5 68862918 68862976 -130767174 - L1MA7 LINE L1 0 6291 6234 11227 173 55 36 chr5 68862995 68865036 -130765114 - L1MA7 LINE L1 -29 6262 4259 306 50 0 0 chr5 68865036 68865076 -130765074 + (TG)n Simple_repeat Simple_repeat 1 40 0 11227 173 55 36 chr5 68865076 68866629 -130763521 - L1MA7 LINE L1 -2032 4259 2595 2143 126 10 0 chr5 68866629 68866922 -130763228 - AluSx SINE Alu -16 296 1 11227 173 55 36 chr5 68866922 68867047 -130763103 - L1MA7 LINE L1 -3696 2595 2474 206 186 23 0 chr5 68867478 68867521 -130762629 + (TA)n Simple_repeat Simple_repeat 2 45 0 380 298 111 20 chr5 68867528 68867726 -130762424 + L2 LINE L2 3098 3313 0 243 287 182 33 chr5 68868265 68868446 -130761704 + MIR SINE MIR 35 242 -20 1962 202 78 28 chr5 68869550 68870114 -130760036 - L1MD3 LINE L1 0 7995 7404 364 211 33 22 chr5 68870114 68870204 -130759946 - MLT1F1 LTR MaLR -443 124 34 239 175 32 16 chr5 68870204 68870267 -130759883 - L1MD3 LINE L1 -877 7118 7055 2377 79 0 0 chr5 68870475 68870765 -130759385 - AluSc SINE Alu -19 290 1 737 307 56 13 chr5 68870800 68871031 -130759119 + MER115 DNA AcHobo 130 370 -323 400 183 39 77 chr5 68871037 68871141 -130759009 - L1MD3 LINE L1 -449 7546 7447 598 219 88 59 chr5 68871313 68871551 -130758599 + MER115 DNA AcHobo 399 643 -50 567 220 14 0 chr5 68872681 68872822 -130757328 - L1MA10 LINE L1 -1 6333 6191 289 119 0 60 chr5 68872848 68872915 -130757235 + (TCCC)n Simple_repeat Simple_repeat 2 64 0 224 186 44 66 chr5 68872972 68873155 -130756995 + (CTATA)n Simple_repeat Simple_repeat 2 180 0 * 237 197 33 59 chr5 68873136 68873288 -130756862 + (CATATA)n Simple_repeat Simple_repeat 5 152 0 * 312 98 26 119 chr5 68873215 68873409 -130756741 + (CTATA)n Simple_repeat Simple_repeat 1 176 0 752 161 0 13 chr5 68873652 68873801 -130756349 - L1MB1 LINE L1 -30 6159 6013 564 262 124 26 chr5 68874026 68874408 -130755742 - L2 LINE L2 0 3313 2814 302 241 35 0 chr5 68874421 68874508 -130755642 - MER20 DNA MER1_type -74 145 56 510 279 156 0 chr5 68875906 68876060 -130754090 - MER5A DNA MER1_type 0 189 12 2189 256 18 73 chr5 68876254 68877184 -130752966 + L1M2a LINE L1 400 1278 -6288 833 271 22 29 chr5 68877197 68877474 -130752676 - L1M2a LINE L1 -6892 276 2 1618 283 79 24 chr5 68877583 68878219 -130751931 + L1M2a LINE L1 1221 1891 -5675 11047 216 28 41 chr5 68878221 68879089 -130751061 + L1M2a LINE L1 2097 2975 -4590 1911 164 7 0 chr5 68879089 68879394 -130750756 - AluSx SINE Alu 0 307 1 11047 216 28 41 chr5 68879394 68883027 -130747123 + L1M2a LINE L1 2975 6440 -1125 189 363 44 7 chr5 68883097 68883232 -130746918 - L2 LINE L2 -2793 521 382 439 182 20 10 chr5 68884199 68884298 -130745852 + MER94 DNA DNA 1 100 -34 182 238 24 0 chr5 68886067 68886109 -130744041 + L2 LINE L2 3215 3257 -15 403 147 67 227 chr5 68886712 68886907 -130743243 - MER5A DNA MER1_type 0 189 33 201 39 0 0 chr5 68886907 68886933 -130743217 + (CTG)n Simple_repeat Simple_repeat 1 26 0 403 147 67 227 chr5 68886933 68886962 -130743188 - MER5A DNA MER1_type -156 33 1 4099 120 97 108 chr5 68887730 68889154 -130740996 + pTR5 LTR ERV1 741 2438 0 368 245 101 14 chr5 68889163 68889302 -130740848 - L1ME3A LINE L1 -31 6139 5989 2329 78 0 0 chr5 68889331 68889648 -130740502 - AluY SINE Alu 0 317 1 4544 141 30 30 chr5 68889654 68890578 -130739572 - L1MA7 LINE L1 -1 6290 5367 528 146 0 0 chr5 68892874 68892963 -130737187 + (TTCC)n Simple_repeat Simple_repeat 4 92 0 743 161 0 0 chr5 68892971 68893108 -130737042 - L1MB1 LINE L1 -40 6149 6013 564 262 124 26 chr5 68893333 68893715 -130736435 - L2 LINE L2 0 3313 2814 302 241 35 0 chr5 68893728 68893815 -130736335 - MER20 DNA MER1_type -74 145 56 510 279 156 0 chr5 68895213 68895367 -130734783 - MER5A DNA MER1_type 0 189 12 2189 256 18 73 chr5 68895561 68896491 -130733659 + L1M2a LINE L1 400 1278 -6288 863 272 22 25 chr5 68896504 68896780 -130733370 - L1M2a LINE L1 -6892 276 2 1618 283 79 24 chr5 68896889 68897525 -130732625 + L1M2a LINE L1 1221 1891 -5675 8607 211 37 34 chr5 68897527 68898395 -130731755 + L1M2a LINE L1 2097 2961 -4604 1911 164 7 0 chr5 68898395 68898700 -130731450 - AluSx SINE Alu 0 307 1 8607 211 37 34 chr5 68898700 68902675 -130727475 + L1M2a LINE L1 2961 6822 -743 309 281 78 36 chr5 68902718 68902910 -130727240 + L1MA8 LINE L1 6066 6265 -26 204 255 0 0 chr5 68902961 68903008 -130727142 + T-rich Low_complexity Low_complexity 1 47 0 220 298 19 29 chr5 68903062 68903166 -130726984 - MER5B DNA MER1_type -75 103 1 229 316 66 13 chr5 68903422 68903498 -130726652 + MER5A DNA MER1_type 26 105 -84 509 273 19 62 chr5 68904513 68904722 -130725428 + L2 LINE L2 3086 3285 -28 1956 183 12 26 chr5 68904722 68905137 -130725013 - MLT1C LTR MaLR 0 467 59 209 152 0 0 chr5 68905164 68905197 -130724953 + L2 LINE L2 3279 3311 -2 617 258 134 55 chr5 68907623 68908077 -130722073 - MLT1J LTR MaLR -2 509 20 284 313 71 27 chr5 68909079 68909191 -130720959 - L2 LINE L2 0 3272 3156 450 342 65 45 chr5 68909519 68909924 -130720226 + L2 LINE L2 1463 1882 -1432 1850 168 0 16 chr5 68909924 68910239 -130719911 - AluJb SINE Alu -2 310 1 450 342 65 45 chr5 68910239 68910360 -130719790 + L2 LINE L2 1882 1999 -1315 230 86 0 0 chr5 68910769 68910804 -130719346 - L1PA10 LINE L1 -270 5898 5864 1721 89 28 4 chr5 68910804 68911051 -130719099 + L1PA10 LINE L1 5916 6168 0 678 325 88 80 chr5 68911066 68911454 -130718696 + L2 LINE L2 2137 2520 -752 2692 127 20 9 chr5 68911454 68911894 -130718256 - L1PB3 LINE L1 0 6154 5710 678 325 88 80 chr5 68911894 68912623 -130717527 + L2 LINE L2 2520 3266 -6 365 336 111 29 chr5 68913324 68913666 -130716484 - L2 LINE L2 -746 2568 2199 2229 111 0 3 chr5 68914638 68914935 -130715215 - AluSx SINE Alu -4 308 13 245 203 125 0 chr5 68915244 68915308 -130714842 - MIR SINE MIR -108 154 83 2054 277 137 16 chr5 68916010 68916801 -130713349 + L2 LINE L2 2055 2940 -374 238 241 241 0 chr5 68916780 68916863 -130713287 - MER5A DNA MER1_type -27 162 60 * 341 252 92 8 chr5 68916961 68917080 -130713070 + MER63A DNA MER1_type 52 180 -30 365 282 128 7 chr5 68917155 68917304 -130712846 - MIR SINE MIR -13 249 83 243 88 0 0 chr5 68918370 68918404 -130711746 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr5 68918576 68918605 -130711545 + (TG)n Simple_repeat Simple_repeat 2 30 0 244 377 47 9 chr5 68920109 68920215 -130709935 + L2 LINE L2 3117 3226 -46 2327 138 69 19 chr5 68921443 68921920 -130708230 - L1PA16 LINE L1 -9 6157 5657 792 179 71 0 chr5 68921926 68921966 -130708184 - L1 LINE L1 -796 5350 5314 198 0 0 0 chr5 68921966 68921988 -130708162 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 792 179 71 0 chr5 68921988 68922131 -130708019 - L1 LINE L1 -832 5314 5154 1524 182 39 11 chr5 68922149 68922429 -130707721 - AluJo SINE Alu -20 292 5 359 290 97 43 chr5 68922865 68923051 -130707099 + MIR SINE MIR 5 200 -62 246 105 0 0 chr5 68923221 68923259 -130706891 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 261 139 0 0 chr5 68923539 68923582 -130706568 + (CA)n Simple_repeat Simple_repeat 2 44 0 207 139 0 0 chr5 68923582 68923618 -130706532 + (GGGAGA)n Simple_repeat Simple_repeat 3 38 0 1143 240 70 50 chr5 68923824 68924279 -130705871 + MLT2C2 LTR ERVL 1 464 0 562 311 25 6 chr5 68924433 68924594 -130705556 + MER5A DNA MER1_type 26 189 0 955 202 54 5 chr5 68926083 68926286 -130703864 + MER58C DNA MER1_type 1 213 -2 287 188 75 0 chr5 68926432 68926512 -130703638 - L1MA6 LINE L1 -265 6035 5950 1222 165 14 0 chr5 68926512 68926730 -130703420 + L1MA6 LINE L1 6063 6283 -17 25 0 0 0 chr5 68926744 68926769 -130703381 + AT_rich Low_complexity Low_complexity 1 25 0 386 238 87 40 chr5 68927448 68927574 -130702576 - MIR SINE MIR -48 214 83 387 276 16 30 chr5 68928125 68928272 -130701878 - MIR3 SINE MIR -2 206 61 521 301 41 29 chr5 68928294 68928540 -130701610 + HERVL LTR ERVL 4190 4438 -1216 838 361 19 15 chr5 68928693 68929277 -130700873 + HERVL LTR ERVL 4531 5116 -648 1526 212 55 70 chr5 68929576 68930047 -130700103 + LTR16B LTR ERVL 1 464 0 515 269 20 20 chr5 68930473 68930622 -130699528 - MIR SINE MIR -69 193 45 208 343 43 0 chr5 68930622 68930692 -130699458 - L2 LINE L2 -1544 1770 1698 21 0 0 0 chr5 68930757 68930778 -130699372 + AT_rich Low_complexity Low_complexity 1 21 0 281 226 51 102 chr5 68931933 68932070 -130698080 - MIR SINE MIR -63 145 16 367 315 74 30 chr5 68932097 68932300 -130697850 + MIR SINE MIR 20 231 -31 385 245 181 32 chr5 68933975 68934130 -130696020 - MER5A DNA MER1_type 0 189 12 30 59 0 0 chr5 68936769 68936820 -130693330 + AT_rich Low_complexity Low_complexity 1 51 0 1085 343 128 15 chr5 68937703 68938778 -130691372 + L2 LINE L2 1858 3055 -217 286 266 85 0 chr5 68939056 68939150 -130691000 - MER63A DNA MER1_type 0 104 3 303 234 168 0 chr5 68939175 68939282 -130690868 - MIR SINE MIR -14 248 124 2154 48 4 15 chr5 68939341 68939610 -130690540 - AluY SINE Alu -11 300 35 907 283 68 11 chr5 68939807 68940274 -130689876 + HAL1b LINE L1 420 913 -435 415 253 78 6 chr5 68940317 68940483 -130689667 + HAL1b LINE L1 1014 1191 -157 232 257 0 29 chr5 68940588 68940658 -130689492 + (TGG)n Simple_repeat Simple_repeat 1 68 0 246 306 260 15 chr5 68940758 68940954 -130689196 + MIR SINE MIR 13 256 -6 1138 186 5 23 chr5 68941491 68941711 -130688439 + MER20 DNA MER1_type 4 219 0 21 0 0 0 chr5 68941787 68941808 -130688342 + AT_rich Low_complexity Low_complexity 1 21 0 273 119 0 0 chr5 68941826 68941868 -130688282 + (TG)n Simple_repeat Simple_repeat 2 43 0 5582 142 63 15 chr5 68941869 68942327 -130687823 - L1MA8 LINE L1 -27 6264 5829 288 0 0 0 chr5 68942327 68942359 -130687791 + (TG)n Simple_repeat Simple_repeat 2 33 0 5582 142 63 15 chr5 68942359 68943852 -130686298 - L1MA8 LINE L1 -462 5829 4223 257 149 43 0 chr5 68943992 68944039 -130686111 - L1P LINE L1 -1912 4234 4186 21 0 0 0 chr5 68945914 68945935 -130684215 + AT_rich Low_complexity Low_complexity 1 21 0 674 266 20 53 chr5 68946427 68946728 -130683422 + MLT1L LTR MaLR 28 318 -297 932 177 0 121 chr5 68946852 68947100 -130683050 - MER58A DNA MER1_type 0 224 7 255 233 23 0 chr5 68947152 68947238 -130682912 + MLT1L LTR MaLR 518 605 -10 1949 124 73 20 chr5 68947470 68947826 -130682324 + THE1C LTR MaLR 1 375 0 380 354 70 13 chr5 68950729 68950965 -130679185 + L2 LINE L2 2108 2368 -946 2386 72 0 38 chr5 68950965 68951284 -130678866 - AluY SINE Alu -4 307 1 380 354 70 13 chr5 68951284 68951363 -130678787 + L2 LINE L2 2368 2441 -873 655 246 134 54 chr5 68951545 68951822 -130678328 - L1ME1 LINE L1 -5 6230 5932 640 255 94 0 chr5 68951821 68952033 -130678117 - L1ME1 LINE L1 -1951 4264 4033 * 1510 271 81 62 chr5 68952036 68952296 -130677854 - L1ME1 LINE L1 -4461 1935 1681 2219 95 0 0 chr5 68952296 68952621 -130677529 - AluY SINE Alu 0 326 2 1510 271 81 62 chr5 68952621 68953456 -130676694 - L1ME1 LINE L1 -4715 1681 818 681 257 37 28 chr5 68953431 68953649 -130676501 - L1ME1 LINE L1 -6133 263 44 * 591 245 6 12 chr5 68954167 68954330 -130675820 - MER58C DNA MER1_type -6 209 48 505 302 58 0 chr5 68954463 68954635 -130675515 - MIR SINE MIR -3 259 78 583 242 179 9 chr5 68956583 68956806 -130673344 + MIR SINE MIR 2 262 0 383 314 93 23 chr5 68957760 68957932 -130672218 - MIR3 SINE MIR -9 199 16 219 288 189 0 chr5 68958313 68958424 -130671726 + MIR SINE MIR 124 255 -7 483 279 66 6 chr5 68958449 68958632 -130671518 - MER117 DNA MER1_type -1 196 3 192 346 0 26 chr5 68959233 68959311 -130670839 - MIR SINE MIR -186 76 1 * 255 271 114 3 chr5 68959311 68959421 -130670729 + MIR SINE MIR 21 146 -62 22 0 0 0 chr5 68959771 68959793 -130670357 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr5 68960040 68960083 -130670067 + AT_rich Low_complexity Low_complexity 1 43 0 1626 153 90 0 chr5 68960576 68960736 -130669414 - AluJb SINE Alu -14 298 154 234 0 0 0 chr5 68960736 68960762 -130669388 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1626 153 90 0 chr5 68960762 68960869 -130669281 - AluJb SINE Alu -158 154 7 222 118 0 0 chr5 68960878 68960912 -130669238 + (TCCCC)n Simple_repeat Simple_repeat 4 37 0 764 244 96 24 chr5 68960925 68961175 -130668975 - L2 LINE L2 -540 2774 2507 974 240 114 12 chr5 68963258 68963671 -130666479 + L1M4 LINE L1 2609 3063 -3083 2526 171 74 76 chr5 68963702 68964257 -130665893 - MLT2B3 LTR ERVL 0 554 1 288 53 0 0 chr5 68964257 68964295 -130665855 + (TG)n Simple_repeat Simple_repeat 2 39 0 2266 92 7 0 chr5 68964341 68964625 -130665525 + AluSq SINE Alu 1 286 -27 219 203 0 0 chr5 68964639 68964708 -130665442 + (TA)n Simple_repeat Simple_repeat 1 69 0 234 0 0 0 chr5 68965381 68965407 -130664743 + (T)n Simple_repeat Simple_repeat 1 26 0 26 0 0 0 chr5 68965609 68965635 -130664515 + AT_rich Low_complexity Low_complexity 1 26 0 208 308 138 39 chr5 68965797 68965927 -130664223 + L2 LINE L2 3167 3309 -4 27 0 0 0 chr5 68966053 68966080 -130664070 + AT_rich Low_complexity Low_complexity 1 27 0 2051 138 19 32 chr5 68966086 68966457 -130663693 - MER47A DNA MER2_type 0 366 1 1655 170 53 0 chr5 68966476 68966759 -130663391 - AluJb SINE Alu -13 299 2 220 327 119 0 chr5 68967345 68967446 -130662704 + L2 LINE L2 3201 3313 0 1820 178 8 67 chr5 68968691 68968869 -130661281 - MLT1A1 LTR MaLR 0 365 221 1648 175 0 4 chr5 68968869 68969137 -130661013 - AluJb SINE Alu -45 267 1 1820 178 8 67 chr5 68969137 68969346 -130660804 - MLT1A1 LTR MaLR -144 221 1 211 328 41 64 chr5 68970245 68970416 -130659734 + MIR SINE MIR 51 217 -45 192 291 152 0 chr5 68970646 68970725 -130659425 + L2 LINE L2 3169 3259 -13 257 275 14 0 chr5 68970784 68970853 -130659297 - MER69 DNA AcHobo -7 2519 2450 * 461 265 17 0 chr5 68970850 68970967 -130659183 - MER69 DNA AcHobo -2379 147 29 21 36 0 0 chr5 68971130 68971158 -130658992 + AT_rich Low_complexity Low_complexity 1 28 0 317 274 102 13 chr5 68972445 68972602 -130657548 - L1ME LINE L1 -341 5780 5610 1015 181 0 6 chr5 68973073 68973239 -130656911 - AluJb SINE Alu -146 166 2 636 194 0 0 chr5 68973268 68973371 -130656779 - FLAM_C SINE Alu -34 109 7 1008 109 0 0 chr5 68973489 68973626 -130656524 - AluSg/x SINE Alu -16 294 158 1402 147 97 17 chr5 68974226 68974464 -130655686 + AluJb SINE Alu 37 293 -19 6720 201 41 58 chr5 68974716 68975602 -130654548 + L1MA9 LINE L1 2971 3870 -2442 2922 117 9 9 chr5 68975602 68976030 -130654120 - MSTA LTR MaLR 0 428 1 6720 201 41 58 chr5 68976030 68976623 -130653527 + L1MA9 LINE L1 3870 4471 -1841 1361 235 7 0 chr5 68976623 68976895 -130653255 + MLT1A1 LTR MaLR 89 362 -3 6720 201 41 58 chr5 68976895 68977172 -130652978 + L1MA9 LINE L1 4471 4751 -1561 1051 220 91 89 chr5 68977172 68977567 -130652583 + MSTD LTR MaLR 1 396 0 6720 201 41 58 chr5 68977567 68978036 -130652114 + L1MA9 LINE L1 4751 5226 -1086 1560 181 16 32 chr5 68978036 68978182 -130651968 + AluSx SINE Alu 1 148 -164 1559 77 0 19 chr5 68978182 68978391 -130651759 + AluY SINE Alu 100 304 -7 1560 181 16 32 chr5 68978391 68978559 -130651591 + AluSx SINE Alu 148 310 -2 6720 201 41 58 chr5 68978559 68979362 -130650788 + L1MA9 LINE L1 5226 6124 -188 1787 134 43 31 chr5 68979362 68979713 -130650437 - L1MA9 LINE L1 0 6312 5958 6720 201 41 58 chr5 68979713 68979859 -130650291 + L1MA9 LINE L1 6124 6271 -41 1454 285 158 14 chr5 68980152 68980862 -130649288 + L2 LINE L2 2494 3309 -4 205 367 60 7 chr5 68980851 68981001 -130649149 - MIR SINE MIR -61 201 44 * 522 160 8 76 chr5 68981149 68981268 -130648882 - MLT2B1 LTR ERVL -409 111 1 198 0 0 0 chr5 68981315 68981337 -130648813 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 336 163 10 41 chr5 68981337 68981435 -130648715 + CT-rich Low_complexity Low_complexity 4 98 0 26 50 0 0 chr5 68981989 68982029 -130648121 + AT_rich Low_complexity Low_complexity 1 40 0 1614 183 7 4 chr5 68982029 68982308 -130647842 - AluJo SINE Alu -18 294 15 201 94 0 0 chr5 68982324 68982356 -130647794 + (TTAAA)n Simple_repeat Simple_repeat 1 32 0 251 342 154 20 chr5 68982864 68983013 -130647137 + MIR3 SINE MIR 17 185 -23 1371 121 78 4 chr5 68983179 68983435 -130646715 - L1MA3 LINE L1 0 6305 6031 345 43 0 0 chr5 68983851 68983897 -130646253 - MADE1 DNA Mariner 0 80 35 2438 172 18 13 chr5 68983906 68984360 -130645790 + MER65C LTR ERV1 6 461 0 715 312 36 24 chr5 68984580 68984833 -130645317 - MIR SINE MIR -1 261 6 193 262 0 0 chr5 68985475 68985517 -130644633 - MIR3 SINE MIR -23 185 144 287 49 24 0 chr5 68985945 68985986 -130644164 + (TAA)n Simple_repeat Simple_repeat 1 42 0 1035 263 12 8 chr5 68985992 68986235 -130643915 - MIR SINE MIR -8 254 11 1760 182 7 0 chr5 68986855 68987198 -130642952 + AluJb SINE Alu 1 345 0 365 298 78 0 chr5 68989839 68989980 -130640170 + MIR SINE MIR 34 185 -77 711 329 8 4 chr5 68990045 68990279 -130639871 - MIR SINE MIR -21 241 7 3224 60 0 0 chr5 68990658 68991055 -130639095 + THE1B-int LTR MaLR 1183 1579 -1 2031 147 79 12 chr5 68991055 68991396 -130638754 + THE1B LTR MaLR 1 364 0 268 296 104 40 chr5 68991452 68991577 -130638573 + MIR SINE MIR 74 206 -56 403 346 63 30 chr5 68993883 68994120 -130636030 - MIR SINE MIR 0 262 18 327 311 36 66 chr5 68995452 68995619 -130634531 + MIR SINE MIR 52 213 -49 472 182 20 10 chr5 68997195 68997294 -130632856 - MER94 DNA DNA -34 100 1 10458 206 21 10 chr5 68998466 69000924 -130629226 - L1 LINE L1 -1125 6440 3955 1564 164 98 0 chr5 69000924 69001199 -130628951 + AluJb SINE Alu 1 302 -10 687 175 13 17 chr5 69001215 69001455 -130628695 + GA-rich Low_complexity Low_complexity 1 239 0 2248 238 63 30 chr5 69001457 69002674 -130627476 - L1 LINE L1 -3599 3966 2695 * 2306 302 16 12 chr5 69002666 69003420 -130626730 - L1 LINE L1 -6411 1155 399 324 0 0 0 chr5 69003874 69003910 -130626240 + (TG)n Simple_repeat Simple_repeat 1 36 0 250 233 0 0 chr5 69004468 69004511 -130625639 - MIR SINE MIR -56 152 110 2232 121 3 0 chr5 69004901 69005206 -130624944 + AluY SINE Alu 1 306 -5 964 215 32 79 chr5 69005637 69005953 -130624197 - L1MD2 LINE L1 -9 6350 6050 227 241 0 0 chr5 69006433 69006512 -130623638 - L1MC4 LINE L1 -1350 6692 6614 4486 185 94 89 chr5 69007456 69008980 -130621170 + Looper DNA T2_type 26 1558 0 387 294 32 20 chr5 69009113 69009249 -130620901 + MIR3 SINE MIR 33 154 -54 552 182 63 35 chr5 69009727 69009870 -130620280 - LTR45B LTR ERV1 0 489 343 757 303 26 13 chr5 69010241 69010469 -130619681 - ERVL LTR ERVL -777 4987 4757 588 352 102 12 chr5 69010512 69010836 -130619314 - ERVL LTR ERVL -966 4519 4167 1637 234 86 16 chr5 69010839 69011280 -130618870 + MLT1F1 LTR MaLR 3 474 -93 2464 160 77 7 chr5 69012373 69012830 -130617320 + LTR45B LTR ERV1 1 489 0 236 260 122 49 chr5 69013296 69013419 -130616731 - MIR3 SINE MIR -43 165 34 1198 62 0 25 chr5 69013897 69014058 -130616092 + AluY SINE Alu 146 302 -9 2489 191 19 35 chr5 69016619 69017184 -130612966 - L1M3 LINE L1 -359 5809 5254 371 200 29 29 chr5 69017195 69017300 -130612850 - L1M3 LINE L1 -855 5291 5187 991 292 24 0 chr5 69017468 69017809 -130612341 + L1ME2 LINE L1 5797 6147 -17 438 91 52 13 chr5 69017925 69018002 -130612148 - MADE1 DNA Mariner 0 80 1 313 219 18 79 chr5 69018525 69018639 -130611511 - MLT1J LTR MaLR -14 497 391 1628 164 96 45 chr5 69018879 69019256 -130610894 + MSTD LTR MaLR 1 396 0 2354 91 10 0 chr5 69019653 69019961 -130610189 - AluSq SINE Alu 0 313 3 189 0 0 0 chr5 69020105 69020126 -130610024 + (A)n Simple_repeat Simple_repeat 1 21 0 186 71 0 0 chr5 69021383 69021411 -130608739 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 21 36 0 0 chr5 69022732 69022760 -130607390 + AT_rich Low_complexity Low_complexity 1 28 0 2840 230 96 31 chr5 69022760 69022966 -130607184 - L1ME1 LINE L1 -24 6142 5951 1900 155 0 0 chr5 69022966 69023250 -130606900 - AluSx SINE Alu -21 291 8 2840 230 96 31 chr5 69023250 69023847 -130606303 - L1ME1 LINE L1 -215 5951 5395 1840 146 56 24 chr5 69023847 69024225 -130605925 - L1MA7 LINE L1 -1 6290 5901 2840 230 96 31 chr5 69024225 69025197 -130604953 - L1ME1 LINE L1 -771 5395 4269 480 133 0 0 chr5 69025836 69025919 -130604231 + (TCCC)n Simple_repeat Simple_repeat 3 85 0 332 256 92 43 chr5 69026770 69026934 -130603216 - L2 LINE L2 -1 3312 3141 535 289 96 14 chr5 69026946 69027164 -130602986 - MIR SINE MIR -11 251 16 234 303 129 23 chr5 69027446 69027971 -130602179 - L1ME1 LINE L1 -3220 2926 2346 2013 140 0 37 chr5 69030945 69031266 -130598884 - AluSx SINE Alu -3 309 1 1054 234 67 20 chr5 69031710 69032009 -130598141 - L1PB4 LINE L1 0 6156 5844 198 318 76 0 chr5 69032193 69032259 -130597891 - L2 LINE L2 -16 3256 3186 201 274 20 0 chr5 69033234 69033285 -130596865 + (CA)n Simple_repeat Simple_repeat 2 53 0 1671 140 70 8 chr5 69034090 69034446 -130595704 + L1PA16 LINE L1 5749 6163 -3 903 236 85 20 chr5 69035396 69035636 -130594514 - MLT1G1 LTR MaLR 0 595 340 765 264 78 47 chr5 69035636 69036106 -130594044 + MLT1G1 LTR MaLR 1 526 -69 635 239 151 0 chr5 69036922 69037081 -130593069 - MER5A DNA MER1_type -6 183 1 3448 38 5 0 chr5 69037681 69038100 -130592050 + L1PA5 LINE L1 5733 6153 -1 244 246 114 17 chr5 69038350 69038525 -130591625 - L1ME4a LINE L1 0 6121 5930 5471 140 16 18 chr5 69038545 69039732 -130590418 + L1MA6 LINE L1 4411 5598 -702 2229 95 23 3 chr5 69039732 69040036 -130590114 + AluSq SINE Alu 1 310 -3 2096 104 0 67 chr5 69040042 69040370 -130589780 + AluSc SINE Alu 1 306 -3 5471 140 16 18 chr5 69040370 69040600 -130589550 + L1MA6 LINE L1 5603 5837 -463 247 250 26 13 chr5 69040698 69040774 -130589376 - MIR SINE MIR -2 260 184 302 61 143 0 chr5 69040778 69040827 -130589323 - L1PA16 LINE L1 -10 6156 6101 230 104 0 21 chr5 69040973 69041021 -130589129 + (AATTG)n Simple_repeat Simple_repeat 2 48 0 442 272 29 8 chr5 69041047 69041217 -130588933 + L1MA10 LINE L1 5990 6326 -8 513 237 103 31 chr5 69042175 69042257 -130587893 - L1ME4a LINE L1 -347 5774 5699 360 0 0 0 chr5 69042257 69042297 -130587853 + (TG)n Simple_repeat Simple_repeat 1 40 0 513 237 103 31 chr5 69042297 69042408 -130587742 - L1ME4a LINE L1 -422 5699 5567 242 292 161 22 chr5 69042417 69042554 -130587596 - L2 LINE L2 -1391 1923 1768 917 251 54 17 chr5 69042561 69042800 -130587350 + LTR16A LTR ERVL 197 444 -6 1634 227 132 59 chr5 69042807 69043588 -130586562 + L1MEc LINE L1 1587 2384 -3831 305 241 37 56 chr5 69043645 69043807 -130586343 + GA-rich Low_complexity Low_complexity 3 161 0 2790 68 3 3 chr5 69043898 69044253 -130585897 - THE1A LTR MaLR 0 355 1 916 198 103 108 chr5 69045130 69045585 -130584565 - Charlie4a DNA MER1_type -6 502 50 25 0 0 0 chr5 69046034 69046059 -130584091 + AT_rich Low_complexity Low_complexity 1 25 0 847 93 0 0 chr5 69049896 69050003 -130580147 + AluSg/x SINE Alu 179 285 -27 392 52 35 0 chr5 69050003 69050061 -130580089 + (TAGA)n Simple_repeat Simple_repeat 4 63 0 180 77 0 0 chr5 69050903 69050929 -130579221 + (T)n Simple_repeat Simple_repeat 1 26 0 335 311 69 5 chr5 69050973 69051205 -130578945 - L1ME LINE L1 -499 5667 5423 26 0 0 0 chr5 69051291 69051317 -130578833 + AT_rich Low_complexity Low_complexity 1 26 0 483 288 54 29 chr5 69051529 69051807 -130578343 - L1ME LINE L1 -1127 5019 4735 573 169 34 0 chr5 69052324 69052442 -130577708 - L1MA8 LINE L1 0 6291 6170 5306 179 32 10 chr5 69052655 69054611 -130575539 - L1PA16 LINE L1 0 6166 4165 337 263 12 35 chr5 69057469 69057640 -130572510 + T-rich Low_complexity Low_complexity 1 167 0 2185 117 0 3 chr5 69058933 69059240 -130570910 - AluSx SINE Alu -3 309 4 333 321 20 88 chr5 69060239 69060427 -130569723 + HAL1b LINE L1 42 210 -1138 2031 95 0 0 chr5 69060427 69060691 -130569459 + AluSg SINE Alu 47 310 0 333 321 20 88 chr5 69060691 69060751 -130569399 + HAL1b LINE L1 210 273 -1075 291 331 101 28 chr5 69060868 69061372 -130568778 + HAL1b LINE L1 367 907 -441 308 286 57 19 chr5 69061581 69061791 -130568359 + L1 LINE L1 2194 2411 -3735 761 245 18 0 chr5 69061962 69062125 -130568025 - MER58B DNA MER1_type -3 338 173 189 0 0 0 chr5 69062175 69062196 -130567954 + (TATG)n Simple_repeat Simple_repeat 4 24 0 342 153 0 0 chr5 69062267 69062326 -130567824 + (TA)n Simple_repeat Simple_repeat 2 60 0 261 308 56 28 chr5 69062326 69062469 -130567681 + L1 LINE L1 2689 2835 -3311 4721 130 26 1 chr5 69062585 69063326 -130566824 + L1PA15 LINE L1 5386 6144 -21 5316 164 28 12 chr5 69063333 69064336 -130565814 + L1MC2 LINE L1 5315 6333 -11 248 309 86 39 chr5 69064335 69064999 -130565151 + L1 LINE L1 3115 3809 -2337 * 625 265 64 43 chr5 69065245 69065479 -130564671 + MIR SINE MIR 5 243 -19 532 253 116 5 chr5 69065740 69065938 -130564212 - MER112 DNA MER1_type -36 224 5 24 0 0 0 chr5 69066072 69066096 -130564054 + AT_rich Low_complexity Low_complexity 1 24 0 329 277 32 11 chr5 69066894 69066988 -130563162 - L2 LINE L2 -197 3075 2980 383 379 89 32 chr5 69068183 69068521 -130561629 - L2 LINE L2 -5 3267 2911 523 215 41 18 chr5 69068531 69068670 -130561480 - MSTA LTR MaLR -153 273 130 2099 131 131 13 chr5 69068760 69069143 -130561007 + MSTA LTR MaLR 1 428 0 2198 116 0 28 chr5 69069419 69069738 -130560412 + AluSx SINE Alu 1 310 -2 496 236 54 69 chr5 69069885 69070088 -130560062 + MIR SINE MIR 2 201 -61 180 224 143 0 chr5 69070278 69070327 -130559823 + MIR SINE MIR 196 251 -11 521 325 42 17 chr5 69070337 69070577 -130559573 - L2 LINE L2 -1025 2289 2044 2137 124 0 10 chr5 69070906 69071212 -130558938 + AluSx SINE Alu 3 305 -7 391 299 76 22 chr5 69071784 69071968 -130558182 + MIR SINE MIR 21 214 -48 2315 97 7 0 chr5 69071999 69072297 -130557853 - AluSq SINE Alu -13 300 1 22 35 0 0 chr5 69074486 69074515 -130555635 + AT_rich Low_complexity Low_complexity 1 29 0 197 302 11 17 chr5 69074769 69074844 -130555306 - MIR SINE MIR -58 150 74 262 260 47 39 chr5 69075525 69075652 -130554498 - L3b LINE CR1 -202 1381 1254 219 158 53 26 chr5 69075713 69075789 -130554361 + (TA)n Simple_repeat Simple_repeat 2 79 0 336 48 0 0 chr5 69075791 69075833 -130554317 + (CA)n Simple_repeat Simple_repeat 2 43 0 360 250 185 0 chr5 69075958 69076066 -130554084 + MIR3 SINE MIR 52 179 -29 313 273 57 67 chr5 69076376 69076570 -130553580 - L1ME3A LINE L1 -2 6168 5977 243 306 108 0 chr5 69076624 69076781 -130553369 - L1ME3A LINE L1 -207 5955 5782 943 297 82 7 chr5 69076800 69076897 -130553253 - L1ME3A LINE L1 -456 5706 5618 3630 69 0 2 chr5 69076897 69077374 -130552776 - L1PA7 LINE L1 -3 6151 5676 943 297 82 7 chr5 69077374 69077812 -130552338 - L1ME3A LINE L1 -544 5618 5126 1928 213 25 2 chr5 69077860 69078301 -130551849 + L1MB7 LINE L1 3960 4410 -1736 2470 59 0 0 chr5 69078314 69078637 -130551513 - L1P LINE L1 -1622 4524 4202 623 60 0 0 chr5 69078637 69078713 -130551437 + L1PA5 LINE L1 6070 6152 -2 4078 204 24 20 chr5 69078714 69079404 -130550746 + L1MB7 LINE L1 4404 5090 -1094 2241 84 10 17 chr5 69079404 69079701 -130550449 + AluY SINE Alu 1 295 -16 4078 204 24 20 chr5 69079701 69080723 -130549427 + L1MB7 LINE L1 5090 6121 -63 1006 297 92 14 chr5 69080704 69081269 -130548881 - L1ME3A LINE L1 -1529 4617 4009 * 225 185 93 19 chr5 69081387 69081441 -130548709 + MLT1H LTR MaLR 95 152 -397 1056 265 107 29 chr5 69081752 69082266 -130547884 - L1ME3A LINE L1 -2166 3980 3427 1769 149 38 3 chr5 69082812 69083128 -130547022 - L1MC1 LINE L1 -13 6320 5994 570 308 69 24 chr5 69085331 69085578 -130544572 - MIR SINE MIR -3 259 2 221 404 46 6 chr5 69085636 69085790 -130544360 - MIR SINE MIR -70 192 34 432 0 0 0 chr5 69086388 69086436 -130543714 + (TG)n Simple_repeat Simple_repeat 2 49 0 184 307 150 46 chr5 69086544 69086697 -130543453 + L2 LINE L2 1853 2021 -1293 215 276 20 51 chr5 69087074 69087172 -130542978 + L2 LINE L2 3131 3225 -88 21 57 0 0 chr5 69087349 69087384 -130542766 + AT_rich Low_complexity Low_complexity 1 35 0 1359 90 0 0 chr5 69087776 69087943 -130542207 - AluSc SINE Alu -16 293 127 257 305 108 18 chr5 69088056 69088223 -130541927 - MER5A DNA MER1_type 0 189 8 22 0 0 0 chr5 69088650 69088672 -130541478 + AT_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr5 69090052 69090079 -130540071 + (GA)n Simple_repeat Simple_repeat 2 28 0 462 18 0 0 chr5 69091693 69091748 -130538402 + (CA)n Simple_repeat Simple_repeat 1 55 0 200 35 35 0 chr5 69092379 69092408 -130537742 + (TG)n Simple_repeat Simple_repeat 2 31 0 12539 27 4 4 chr5 69093098 69095342 -130534808 + L1PA3 LINE L1 3908 6152 -3 733 241 82 32 chr5 69095487 69095919 -130534231 + MER113 DNA MER1_type? 2 521 0 192 97 0 0 chr5 69096143 69096174 -130533976 + (CCCTAA)n Simple_repeat Simple_repeat 4 34 0 237 33 0 0 chr5 69096238 69096268 -130533882 + (T)n Simple_repeat Simple_repeat 1 30 0 690 245 39 73 chr5 69096279 69096565 -130533585 + L2 LINE L2 3038 3313 0 237 174 0 0 chr5 69097102 69097148 -130533002 + MER103 DNA DNA 8 53 -113 406 279 87 0 chr5 69097545 69097649 -130532501 + MIR3 SINE MIR 87 199 -9 1921 115 118 91 chr5 69098359 69098776 -130531374 + MSTA LTR MaLR 1 428 0 236 302 104 10 chr5 69098830 69098926 -130531224 + MIR SINE MIR 43 147 -115 415 345 99 50 chr5 69099454 69099816 -130530334 + L2 LINE L2 2807 3186 -86 938 181 194 41 chr5 69099961 69100254 -130529896 - MER2 DNA MER2_type -7 338 1 24 77 0 0 chr5 69101591 69101643 -130528507 + AT_rich Low_complexity Low_complexity 1 52 0 294 293 32 16 chr5 69101655 69101778 -130528372 - L1ME LINE L1 -400 5721 5597 833 305 109 32 chr5 69103260 69103637 -130526513 - MLT1I LTR MaLR 0 409 4 2773 211 22 40 chr5 69104276 69104994 -130525156 + L1MD1 LINE L1 4943 5605 -637 2421 154 8 8 chr5 69104994 69105384 -130524766 - MLT1B LTR MaLR 0 390 1 2773 211 22 40 chr5 69105384 69105866 -130524284 + L1MD1 LINE L1 5605 6094 -148 427 208 40 18 chr5 69105839 69106037 -130524113 - L1MEc LINE L1 -2812 3403 3195 * 635 286 132 28 chr5 69106051 69106376 -130523774 - LTR16A LTR ERVL -16 434 76 1876 245 119 41 chr5 69106466 69107887 -130522263 - L1MEc LINE L1 -3056 3159 1640 4768 163 24 9 chr5 69107911 69108530 -130521620 - L1MA7 LINE L1 -2 6289 5652 401 0 20 0 chr5 69108530 69108579 -130521571 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 4768 163 24 9 chr5 69108579 69108835 -130521315 - L1MA7 LINE L1 -639 5652 5401 1257 123 0 0 chr5 69108858 69109028 -130521122 - AluSg/x SINE Alu -5 307 138 324 45 0 23 chr5 69109030 69109074 -130521076 - MLT2A1 LTR ERVL -1 452 410 1568 72 49 9 chr5 69109424 69109647 -130520503 - MLT2A1 LTR ERVL -212 232 1 790 196 0 0 chr5 69109656 69109789 -130520361 - FLAM_C SINE Alu 0 133 1 673 107 8 69 chr5 69109789 69109920 -130520230 - L1MA7 LINE L1 -894 5397 5275 351 220 68 17 chr5 69114099 69114217 -130515933 + L1M4 LINE L1 5146 5269 -877 575 123 15 77 chr5 69115419 69115549 -130514601 + L1M LINE L1 5274 5395 -896 826 147 49 0 chr5 69115550 69115693 -130514457 + AluSq/x SINE Alu 1 150 -162 2414 87 38 6 chr5 69115693 69116040 -130514110 + MLT2A1 LTR ERVL 9 366 -78 2419 99 57 23 chr5 69217930 69218282 -130411868 - THE1B LTR MaLR 0 364 1 629 240 93 20 chr5 69218413 69218563 -130411587 - MER45A DNA AcHobo -17 161 1 410 330 9 0 chr5 69218864 69218979 -130411171 - L2 LINE L2 -6 3307 3192 210 150 0 0 chr5 69219019 69219059 -130411091 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 435 273 141 48 chr5 69220253 69220483 -130409667 + MIR SINE MIR 7 262 0 353 303 281 22 chr5 69220498 69220818 -130409332 - L2 LINE L2 -47 3266 2864 2894 170 39 34 chr5 69221037 69221625 -130408525 + L1MA7 LINE L1 5700 6290 -1 2705 87 11 11 chr5 69222499 69222854 -130407296 - THE1A LTR MaLR 0 355 1 443 307 14 7 chr5 69223254 69223394 -130406756 - MIR SINE MIR -108 154 14 345 224 10 10 chr5 69223893 69223991 -130406159 + MLT2B1 LTR ERVL 1 98 -422 * 930 197 59 24 chr5 69223985 69224197 -130405953 + MLT2B1 LTR ERVL 230 471 -49 292 267 186 0 chr5 69225877 69225963 -130404187 - MIR SINE MIR -67 141 40 642 281 46 50 chr5 69227495 69227755 -130402395 - MIR SINE MIR 0 262 4 633 161 23 138 chr5 69227782 69227956 -130402194 - MER5A DNA MER1_type -31 158 5 536 326 66 8 chr5 69228000 69228242 -130401908 + MIR SINE MIR 4 259 -3 21 57 0 0 chr5 69228262 69228297 -130401853 + AT_rich Low_complexity Low_complexity 1 35 0 374 326 16 16 chr5 69228328 69228457 -130401693 + L2 LINE L2 2920 3048 -265 391 294 117 24 chr5 69228520 69228983 -130401167 - L1MEd LINE L1 -2637 3492 2987 1262 263 143 57 chr5 69228990 69229674 -130400476 - L1MEd LINE L1 -5373 746 4 340 309 49 49 chr5 69229679 69229902 -130400248 + L2 LINE L2 3089 3311 -2 235 288 83 40 chr5 69229972 69230171 -130399979 + HAL1b LINE L1 1193 1299 -49 197 283 65 33 chr5 69230729 69230821 -130399329 - L2 LINE L2 -24 3248 3154 300 308 136 32 chr5 69230918 69231139 -130399011 + L2 LINE L2 2808 3051 -221 515 159 30 23 chr5 69231139 69231271 -130398879 + CT-rich Low_complexity Low_complexity 4 136 0 1803 167 37 0 chr5 69231273 69231573 -130398577 - AluJo SINE Alu 0 312 2 226 295 42 53 chr5 69231627 69231722 -130398428 - L2 LINE L2 -3 3269 3176 6410 95 4 35 chr5 69232021 69233115 -130397035 + L1PB1 LINE L1 5084 6150 -1 26 50 0 0 chr5 69233115 69233155 -130396995 + AT_rich Low_complexity Low_complexity 1 40 0 1215 316 59 29 chr5 69233298 69233994 -130396156 - L2 LINE L2 -900 2414 1698 754 239 18 31 chr5 69234218 69234440 -130395710 + LTR37B LTR ERV1 246 464 -4 671 282 52 16 chr5 69236272 69236520 -130393630 - MIR SINE MIR 0 262 6 260 305 74 11 chr5 69236554 69236649 -130393501 - L3 LINE CR1 -42 1535 1435 1173 117 53 0 chr5 69236846 69237052 -130393098 - MER6 DNA MER2_type -46 819 603 1215 216 14 24 chr5 69237060 69237352 -130392798 + MSTB1-int LTR MaLR 1056 1344 -307 43496 34 22 1 chr5 69237355 69243370 -130386780 + L1PA3 LINE L1 12 6155 0 1421 183 39 16 chr5 69243375 69243686 -130386464 + MSTB1-int LTR MaLR 1334 1651 0 2518 118 96 30 chr5 69243686 69244091 -130386059 + MSTB1 LTR MaLR 1 432 0 2043 199 3 6 chr5 69244091 69244438 -130385712 - MER6 DNA MER2_type -519 346 1 666 266 56 28 chr5 69244636 69244850 -130385300 + MIR SINE MIR 12 231 -31 242 241 40 0 chr5 69248917 69248990 -130381160 - MIR SINE MIR -67 141 89 236 294 128 37 chr5 69251212 69251399 -130378751 + MIR3 SINE MIR 4 207 -1 180 325 70 9 chr5 69251473 69251587 -130378563 - L3b LINE CR1 -358 1225 1105 307 288 72 39 chr5 69251782 69251935 -130378215 + MIR3 SINE MIR 29 186 -22 188 35 35 0 chr5 69252052 69252081 -130378069 + (CAA)n Simple_repeat Simple_repeat 2 31 0 223 263 53 0 chr5 69252454 69252511 -130377639 - MIR SINE MIR -18 244 185 379 303 176 31 chr5 69252607 69252868 -130377282 - MER102a DNA MER1_type 0 330 32 22 70 0 0 chr5 69253793 69253836 -130376314 + AT_rich Low_complexity Low_complexity 1 43 0 2318 253 98 37 chr5 69254261 69254992 -130375158 - MER21B LTR ERV1 -58 805 30 357 279 0 0 chr5 69255018 69255097 -130375053 - MER21B LTR ERV1 -773 90 12 910 219 58 34 chr5 69255285 69255625 -130374525 - MER4C LTR ERV1 -1 695 165 715 191 20 71 chr5 69255598 69255904 -130374246 - MER4C LTR ERV1 -315 349 1 * 7440 42 1 0 chr5 69255931 69257153 -130372997 + L1PA5 LINE L1 4922 6154 0 3325 233 49 9 chr5 69257707 69258683 -130371467 - L1ME1 LINE L1 -5 6972 5963 478 174 0 43 chr5 69258691 69258783 -130371367 + FLAM_A SINE Alu 35 122 -20 1145 193 49 111 chr5 69258784 69259270 -130370880 - L1ME1 LINE L1 -981 5976 5521 388 200 103 0 chr5 69259281 69259408 -130370742 - L1ME1 LINE L1 -4783 2095 1581 * 4880 182 56 9 chr5 69259401 69260430 -130369720 - L1MC3 LINE L1 -10 7775 6698 682 211 118 93 chr5 69260452 69260775 -130369375 - L1ME1 LINE L1 -5324 1535 1205 24 32 0 0 chr5 69261589 69261620 -130368530 + AT_rich Low_complexity Low_complexity 1 31 0 565 232 124 138 chr5 69262944 69263298 -130366852 - MER21B LTR ERV1 -514 349 1 235 365 97 7 chr5 69263907 69264052 -130366098 - MIR SINE MIR -84 178 21 4349 183 66 28 chr5 69265415 69266630 -130363520 + L1MB8 LINE L1 4867 6177 -1 21 0 0 0 chr5 69266691 69266712 -130363438 + AT_rich Low_complexity Low_complexity 1 21 0 34 89 0 0 chr5 69266971 69267061 -130363089 + AT_rich Low_complexity Low_complexity 1 90 0 23 0 0 0 chr5 69267476 69267499 -130362651 + AT_rich Low_complexity Low_complexity 1 23 0 417 260 110 29 chr5 69267610 69267891 -130362259 + L1ME4a LINE L1 5647 5950 -171 250 272 92 63 chr5 69267938 69268320 -130361830 + L1 LINE L1 4769 5161 -985 200 167 19 19 chr5 69268468 69268522 -130361628 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 387 375 71 36 chr5 69268527 69268863 -130361287 + L1MEc LINE L1 34 381 -6015 391 265 33 48 chr5 69269122 69269233 -130360917 + L1MEc LINE L1 636 747 -5649 2226 134 25 11 chr5 69269233 69269592 -130360558 + THE1B LTR MaLR 1 364 0 391 265 33 48 chr5 69269592 69269752 -130360398 + L1MEc LINE L1 747 903 -5493 4493 245 90 62 chr5 69269789 69270452 -130359698 + L1MEc LINE L1 944 1587 -4628 2064 126 20 7 chr5 69270452 69270754 -130359396 + AluSq SINE Alu 1 306 -7 4493 245 90 62 chr5 69270754 69271164 -130358986 + L1MEc LINE L1 1587 1984 -4231 252 0 0 0 chr5 69271164 69271192 -130358958 + (CA)n Simple_repeat Simple_repeat 1 28 0 4493 245 90 62 chr5 69271192 69273125 -130357025 + L1MEc LINE L1 1984 4059 -2156 2392 116 19 11 chr5 69273125 69273497 -130356653 - THE1C LTR MaLR 0 375 1 4493 245 90 62 chr5 69273497 69274379 -130355771 + L1MEc LINE L1 4059 4915 -1300 477 281 9 9 chr5 69274383 69274497 -130355653 + MLT1F LTR MaLR 4 117 -425 733 219 39 44 chr5 69274599 69274912 -130355238 - L1ME LINE L1 -5291 1656 1350 22 35 0 0 chr5 69275403 69275432 -130354718 + AT_rich Low_complexity Low_complexity 1 29 0 5572 109 32 0 chr5 69279737 69280554 -130349596 + L1PA14 LINE L1 5317 6159 -2 398 321 74 70 chr5 69280579 69280949 -130349201 + L2 LINE L2 2216 2590 -724 2324 100 0 0 chr5 69280949 69281250 -130348900 - AluSg SINE Alu -7 303 3 398 321 74 70 chr5 69281250 69281309 -130348841 + L2 LINE L2 2590 2647 -667 2041 250 14 62 chr5 69281329 69282072 -130348078 - L1ME2 LINE L1 -2 6957 6251 882 283 51 54 chr5 69282075 69282708 -130347442 - L1ME2 LINE L1 -4233 2889 2259 2580 106 0 0 chr5 69282718 69283075 -130347075 - L1PB1 LINE L1 -1 6150 5791 333 0 0 0 chr5 69283075 69283112 -130347038 + (TG)n Simple_repeat Simple_repeat 2 38 0 2580 106 0 0 chr5 69283112 69283123 -130347027 - L1PB1 LINE L1 -359 5792 5782 227 281 11 11 chr5 69283171 69283260 -130346890 + L1MC4 LINE L1 6614 6702 -1340 314 291 0 12 chr5 69283261 69283347 -130346803 - L1MC4 LINE L1 -1339 6703 6619 3835 141 18 8 chr5 69283348 69284448 -130345702 - L1P5 LINE L1 -365 5786 4678 871 254 112 0 chr5 69284550 69284943 -130345207 + MER114 LTR ERV 100 536 -112 856 289 72 47 chr5 69285083 69285481 -130344669 - L1ME2 LINE L1 -4887 1536 1546 21219 46 9 0 chr5 69285481 69288908 -130341242 - L1PA5 LINE L1 -17 6137 2680 856 289 72 47 chr5 69288908 69289497 -130340653 - L1ME2 LINE L1 -4876 1547 974 966 318 13 20 chr5 69289735 69290125 -130340025 - L1ME2 LINE L1 -5954 469 83 733 249 11 28 chr5 69290327 69290508 -130339642 - MER20 DNA MER1_type -2 217 40 234 62 0 0 chr5 69290644 69290676 -130339474 + (TC)n Simple_repeat Simple_repeat 1 32 0 210 128 0 0 chr5 69290681 69290720 -130339430 + (CA)n Simple_repeat Simple_repeat 1 39 0 222 62 0 0 chr5 69290885 69290917 -130339233 + (TG)n Simple_repeat Simple_repeat 2 33 0 201 175 0 0 chr5 69291567 69291607 -130338543 + GA-rich Low_complexity Low_complexity 1 40 0 699 264 119 13 chr5 69292444 69292671 -130337479 + MIR SINE MIR 8 258 -4 209 204 0 0 chr5 69292705 69292754 -130337396 + (TA)n Simple_repeat Simple_repeat 1 49 0 555 263 178 13 chr5 69293036 69293188 -130336962 + MER5B DNA MER1_type 2 178 0 628 207 0 0 chr5 69293196 69293312 -130336838 - MER5A DNA MER1_type 0 189 74 1932 248 75 0 chr5 69293312 69293844 -130336306 - MER90 LTR ERV1 0 575 4 269 175 18 53 chr5 69293861 69293918 -130336232 - MER5A DNA MER1_type -134 55 1 396 323 90 53 chr5 69294185 69294507 -130335643 + L2 LINE L2 2928 3261 -52 23 0 0 0 chr5 69294679 69294702 -130335448 + AT_rich Low_complexity Low_complexity 1 23 0 186 260 40 0 chr5 69296144 69296194 -130333956 + L3 LINE CR1 173 224 -1353 2676 152 14 2 chr5 69296274 69296701 -130333449 + MSTB1 LTR MaLR 1 432 0 2217 184 73 45 chr5 69297362 69297798 -130332352 + MLT2B1 LTR ERVL 1 423 -97 288 0 0 0 chr5 69297798 69297830 -130332320 + (TC)n Simple_repeat Simple_repeat 1 32 0 285 29 0 0 chr5 69297831 69297865 -130332285 + (TG)n Simple_repeat Simple_repeat 2 35 0 2217 184 73 45 chr5 69297865 69297932 -130332218 + MLT2B1 LTR ERVL 422 520 0 282 280 36 33 chr5 69300500 69300652 -130329498 + MIR SINE MIR 36 152 -56 208 198 0 53 chr5 69301216 69301318 -130328832 - L2 LINE L2 0 3272 3171 327 172 24 213 chr5 69301744 69301913 -130328237 + MIR SINE MIR 115 251 -11 2113 95 22 38 chr5 69302095 69302412 -130327738 + AluSx SINE Alu 1 312 0 2015 131 0 0 chr5 69302420 69302732 -130327418 + AluSx SINE Alu 1 312 0 301 302 64 84 chr5 69302744 69303184 -130326966 - L2 LINE L2 -791 2523 2093 1394 246 89 68 chr5 69303657 69304373 -130325777 + L1MC4a LINE L1 5254 5984 -1824 471 261 92 99 chr5 69304685 69305349 -130324801 + L1MC4a LINE L1 6563 7230 -731 22 0 0 0 chr5 69306534 69306556 -130323594 + AT_rich Low_complexity Low_complexity 1 22 0 649 277 118 94 chr5 69307117 69307500 -130322650 - L2 LINE L2 -3 3269 2878 40515 36 22 1 chr5 69309073 69315097 -130315053 + L1PA2 LINE L1 1 6155 0 2035 125 17 9 chr5 69315204 69315548 -130314602 - THE1C LTR MaLR -28 347 1 500 63 0 13 chr5 69315548 69315627 -130314523 - THE1C-int LTR MaLR 0 1580 1503 817 133 15 0 chr5 69315629 69315764 -130314386 - THE1C-int LTR MaLR -1443 137 1 2210 134 21 19 chr5 69315764 69316138 -130314012 - THE1C LTR MaLR 0 375 1 385 235 87 0 chr5 69316493 69316608 -130313542 - LTR16C LTR ERVL -7 484 360 446 250 15 0 chr5 69316637 69316773 -130313377 - LTR37A LTR ERV1 0 426 289 398 218 46 0 chr5 69317061 69317148 -130313002 - LTR16C LTR ERVL -205 286 196 436 235 81 60 chr5 69317322 69317471 -130312679 + L2 LINE L2 3154 3305 -8 250 59 44 44 chr5 69318231 69318299 -130311851 + (CAAAAA)n Simple_repeat Simple_repeat 6 73 0 200 296 14 14 chr5 69321133 69321204 -130308946 + MIR SINE MIR 100 170 -92 505 264 136 4 chr5 69321836 69322086 -130308064 + LTR50 LTR ERVL 1 283 -512 717 202 176 15 chr5 69322086 69322281 -130307869 + LTR50 LTR ERVL 478 729 -66 5019 186 33 17 chr5 69322281 69323346 -130306804 + Tigger6a DNA MER2_type 2 1083 0 717 202 176 15 chr5 69323346 69323417 -130306733 + LTR50 LTR ERVL 729 787 -8 190 302 0 32 chr5 69323483 69323546 -130306604 + MIR3 SINE MIR 9 69 -139 500 227 27 0 chr5 69323668 69323778 -130306372 + MLT1D LTR MaLR 4 116 -389 220 217 48 48 chr5 69323781 69323864 -130306286 - MIR SINE MIR -56 206 124 1401 204 92 27 chr5 69323958 69324342 -130305808 + MLT1D LTR MaLR 92 505 0 2662 191 44 40 chr5 69324658 69325157 -130304993 + L1PA4 LINE L1 4419 4915 -1240 579 165 9 0 chr5 69325157 69325266 -130304884 + MER41A LTR ERV1 400 509 -45 2662 191 44 40 chr5 69325266 69326470 -130303680 + L1PA4 LINE L1 4915 6152 -3 1883 119 39 60 chr5 69326480 69326865 -130303285 + L1MA9 LINE L1 5936 6312 0 330 268 200 21 chr5 69327181 69327371 -130302779 + MIR SINE MIR 24 247 -15 210 333 0 0 chr5 69327520 69327577 -130302573 + L2 LINE L2 3208 3264 -8 552 267 84 38 chr5 69328144 69328511 -130301639 + L1MC4 LINE L1 7393 7776 -266 304 279 129 7 chr5 69328517 69328664 -130301486 + L1MC4 LINE L1 7876 8040 -2 2102 115 0 0 chr5 69328989 69329304 -130300846 - AluSg SINE Alu 0 315 1 225 65 0 0 chr5 69329996 69330027 -130300123 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 617 304 83 4 chr5 69330441 69330671 -130299479 - MIR SINE MIR -2 260 13 385 252 122 14 chr5 69331673 69331812 -130298338 - MIR SINE MIR -42 220 67 1887 214 97 34 chr5 69331847 69332375 -130297775 - MER74B LTR ERVL -4 618 58 639 271 21 16 chr5 69333013 69333201 -130296949 - MIR SINE MIR -3 259 71 442 298 120 22 chr5 69334306 69334531 -130295619 - MIR SINE MIR -6 256 10 181 86 29 57 chr5 69335047 69335082 -130295068 - L3 LINE CR1 -15 1562 1529 489 265 12 25 chr5 69336388 69336550 -130293600 + MER117 DNA MER1_type 3 162 -35 511 267 69 6 chr5 69336571 69336755 -130293395 - MIR SINE MIR -63 145 11 274 292 29 66 chr5 69336764 69336901 -130293249 + MIR SINE MIR 76 207 -55 3468 169 17 53 chr5 69337806 69338530 -130291620 + L1MB4 LINE L1 5450 6147 -33 6033 100 26 0 chr5 69338530 69339825 -130290325 - L1PA15 LINE L1 -2 6163 4850 3468 169 17 53 chr5 69339825 69339857 -130290293 + L1MB4 LINE L1 6147 6179 -1 1408 180 15 101 chr5 69340114 69340509 -130289641 + MLT1A1 LTR MaLR 3 363 -2 299 324 53 71 chr5 69340690 69340925 -130289225 - L2 LINE L2 -217 3055 2817 2270 89 0 0 chr5 69340925 69341206 -130288944 + AluSq SINE Alu 1 281 -32 194 0 39 0 chr5 69341208 69341234 -130288916 + (TAA)n Simple_repeat Simple_repeat 2 28 0 299 324 53 71 chr5 69341234 69341384 -130288766 - L2 LINE L2 -456 2816 2628 577 204 49 42 chr5 69341403 69341545 -130288605 - L2 LINE L2 0 3313 3171 478 307 105 18 chr5 69343454 69343682 -130286468 + MIR SINE MIR 14 261 -1 2179 114 28 0 chr5 69344238 69344528 -130285622 - AluSg SINE Alu -12 298 1 624 308 40 5 chr5 69344841 69345065 -130285085 - MIR SINE MIR -14 248 17 897 290 130 35 chr5 69345435 69346386 -130283764 - L1M4 LINE L1 -1318 4828 3776 580 298 101 58 chr5 69346387 69346921 -130283229 - L1M4 LINE L1 -2409 3737 3181 2942 234 12 24 chr5 69346921 69348036 -130282114 - L1ME1 LINE L1 -16 6146 5051 1605 115 88 83 chr5 69348043 69348080 -130282070 - THE1C LTR MaLR 0 375 340 9810 28 16 3 chr5 69348080 69350026 -130280124 + L1PA4 LINE L1 4199 6155 0 1605 115 88 83 chr5 69350026 69350361 -130279789 - THE1C LTR MaLR -35 340 1 1921 215 18 40 chr5 69350364 69350913 -130279237 - L1ME1 LINE L1 -1103 5043 4507 2194 104 35 29 chr5 69350942 69351289 -130278861 - THE1B LTR MaLR -15 349 1 893 254 61 0 chr5 69351289 69351651 -130278499 - L1ME1 LINE L1 -1652 4494 4111 580 349 16 11 chr5 69352617 69352806 -130277344 - MIR3 SINE MIR -2 206 17 603 40 0 0 chr5 69353288 69353362 -130276788 + (TTTC)n Simple_repeat Simple_repeat 2 75 0 1971 152 11 52 chr5 69353372 69353753 -130276397 + MLT1A1 LTR MaLR 1 365 0 281 254 85 51 chr5 69353753 69353871 -130276279 + MIR SINE MIR 85 206 -56 1445 271 24 9 chr5 69354309 69354766 -130275384 - LTR16B LTR ERVL 0 464 1 568 301 87 15 chr5 69354985 69355181 -130274969 - MIR SINE MIR -40 222 13 316 287 57 38 chr5 69355859 69356016 -130274134 + MIR3 SINE MIR 3 162 -46 276 191 16 95 chr5 69356376 69356439 -130273711 - L2 LINE L2 -8 3264 3207 356 195 58 29 chr5 69357207 69357381 -130272769 + (TA)n Simple_repeat Simple_repeat 2 180 0 225 139 0 0 chr5 69357594 69357637 -130272513 + (TA)n Simple_repeat Simple_repeat 2 44 0 1090 209 86 26 chr5 69357728 69358110 -130272040 - L1MC5 LINE L1 -50 7911 7507 1093 173 144 0 chr5 69358128 69358399 -130271751 - MER33 DNA MER1_type -9 315 6 732 167 0 0 chr5 69359170 69359284 -130270866 + FLAM_C SINE Alu 2 115 -18 27 29 0 0 chr5 69359289 69359323 -130270827 + AT_rich Low_complexity Low_complexity 1 34 0 216 309 9 82 chr5 69359634 69359744 -130270406 - L3 LINE CR1 -17 1560 1459 223 271 0 17 chr5 69360858 69360917 -130269233 - L2 LINE L2 -1 3271 3214 360 0 0 0 chr5 69362500 69362540 -130267610 + (TG)n Simple_repeat Simple_repeat 1 40 0 455 222 0 0 chr5 69362882 69362990 -130267160 + MER53 DNA DNA 1 108 -81 601 160 111 0 chr5 69363047 69363191 -130266959 + MER53 DNA DNA 30 189 0 289 278 79 16 chr5 69363221 69363347 -130266803 + MLT1J LTR MaLR 88 221 -290 452 319 44 0 chr5 69363384 69363544 -130266606 + MLT1J LTR MaLR 343 509 -2 186 43 0 0 chr5 69363796 69363819 -130266331 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1831 199 33 13 chr5 69364586 69364983 -130265167 + MLT1C LTR MaLR 63 467 0 395 148 0 0 chr5 69366258 69366319 -130263831 + LTR52-int LTR ERVL 150 210 -3346 723 263 30 4 chr5 69366329 69366561 -130263589 + L1MC5 LINE L1 7294 7531 -430 2009 93 18 0 chr5 69366723 69367024 -130263126 + AluSp SINE Alu 1 306 0 729 223 16 18 chr5 69367026 69367344 -130262806 + LTR52 LTR ERVL 14 419 -2 2178 136 0 0 chr5 69367916 69368218 -130261932 - AluSq SINE Alu -11 302 1 976 301 38 9 chr5 69368525 69368870 -130261280 - MLT1J2 LTR MaLR -14 436 82 235 302 133 7 chr5 69369146 69369424 -130260726 - L1MEd LINE L1 -2934 3195 2883 1068 219 143 43 chr5 69369432 69369760 -130260390 - MLT1A1 LTR MaLR 0 365 5 558 341 37 7 chr5 69369852 69370260 -130259890 - L1MEd LINE L1 -3327 2802 2383 208 227 0 0 chr5 69370438 69370482 -130259668 + (TTTG)n Simple_repeat Simple_repeat 4 47 0 2251 106 0 0 chr5 69370759 69371051 -130259099 + AluSg SINE Alu 1 292 -18 228 216 0 0 chr5 69371051 69371102 -130259048 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 253 281 70 16 chr5 69371137 69371265 -130258885 - L1ME LINE L1 -289 5864 5730 225 264 46 35 chr5 69371769 69371856 -130258294 + LTR67 LTR ERVL 114 201 -356 3188 242 35 15 chr5 69372010 69372952 -130257198 - L1ME LINE L1 -1034 5095 4135 1280 309 102 39 chr5 69372938 69374380 -130255770 - L1MEd LINE L1 -4374 1756 13 * 482 256 77 58 chr5 69376040 69376247 -130253903 - L2 LINE L2 0 3313 3103 262 360 33 13 chr5 69376284 69376437 -130253713 + L2 LINE L2 3153 3308 -5 24 0 0 0 chr5 69376557 69376581 -130253569 + AT_rich Low_complexity Low_complexity 1 24 0 289 252 45 36 chr5 69377519 69377630 -130252520 - MIR SINE MIR -64 144 33 372 22 0 0 chr5 69377835 69377880 -130252270 + (CA)n Simple_repeat Simple_repeat 2 46 0 369 0 0 0 chr5 69377879 69377920 -130252230 + (GA)n Simple_repeat Simple_repeat 2 42 0 * 308 200 40 27 chr5 69378055 69378130 -130252020 - L2 LINE L2 -9 3263 3188 1474 151 41 7 chr5 69379409 69379680 -130250470 - L1PA16 LINE L1 -9 6157 5878 264 252 76 0 chr5 69379680 69379799 -130250351 + Charlie7 DNA MER1_type 2480 2607 -5 276 347 24 40 chr5 69380099 69380223 -130249927 + MIR3 SINE MIR 76 197 -11 550 282 137 39 chr5 69380971 69381205 -130248945 + MIR SINE MIR 1 257 -5 560 294 69 5 chr5 69382434 69382638 -130247512 + MIR SINE MIR 3 219 -43 3073 159 74 24 chr5 69382981 69383559 -130246591 - LTR26E LTR ERV1 -15 607 1 2866 102 52 5 chr5 69383932 69384373 -130245777 - MER4C LTR ERV1 -3 462 1 23 33 0 0 chr5 69384659 69384689 -130245461 + AT_rich Low_complexity Low_complexity 1 30 0 2040 128 3 7 chr5 69384690 69384980 -130245170 - AluSx SINE Alu -23 289 1 774 288 66 35 chr5 69385605 69385959 -130244191 - L1M4 LINE L1 -420 5701 5384 652 189 57 23 chr5 69386447 69386622 -130243528 - Charlie4a DNA MER1_type -6 502 322 24 67 0 0 chr5 69386642 69386687 -130243463 + AT_rich Low_complexity Low_complexity 1 45 0 1034 199 49 56 chr5 69386753 69386917 -130243233 - Charlie4a DNA MER1_type -1647 314 151 547 91 0 0 chr5 69386917 69386994 -130243156 - MADE1 DNA Mariner 0 80 4 1034 199 49 56 chr5 69386994 69387116 -130243034 - Charlie4a DNA MER1_type -1810 151 30 396 360 23 6 chr5 69387960 69388135 -130242015 + L2 LINE L2 3131 3308 -5 515 276 39 33 chr5 69388165 69388346 -130241804 + MIR SINE MIR 6 187 -75 21 36 0 0 chr5 69390398 69390426 -130239724 + AT_rich Low_complexity Low_complexity 1 28 0 267 31 0 0 chr5 69390684 69390716 -130239434 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 2396 133 5 50 chr5 69391687 69391943 -130238207 + MSTA LTR MaLR 6 235 -193 2501 141 31 12 chr5 69391943 69392363 -130237787 - MSTA LTR MaLR 0 428 1 2396 133 5 50 chr5 69392363 69392549 -130237601 + MSTA LTR MaLR 235 428 0 226 316 25 13 chr5 69393100 69393179 -130236971 + L3 LINE CR1 1493 1572 -5 205 224 0 35 chr5 69394110 69394168 -130235982 + MIR SINE MIR 164 219 -43 246 116 0 0 chr5 69395098 69395141 -130235009 + (TGAG)n Simple_repeat Simple_repeat 1 43 0 196 309 105 79 chr5 69395782 69395934 -130234216 - MIR SINE MIR -50 212 57 821 238 95 14 chr5 69397241 69397451 -130232699 - MIR SINE MIR -25 237 11 211 175 16 32 chr5 69397530 69397593 -130232557 + T-rich Low_complexity Low_complexity 4 65 0 303 298 81 40 chr5 69398191 69398315 -130231835 + L2 LINE L2 3143 3271 -1 299 236 0 34 chr5 69398541 69398630 -130231520 + L1MC5 LINE L1 7832 7917 -44 21 0 0 0 chr5 69399308 69399329 -130230821 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 69400606 69400627 -130229523 + AT_rich Low_complexity Low_complexity 1 21 0 5166 51 3 0 chr5 69401535 69402193 -130227957 + L1PA5 LINE L1 5520 6179 0 2588 138 5 0 chr5 69403114 69403514 -130226636 + MER57A LTR ERV1 1 402 -1 207 0 0 0 chr5 69403630 69403653 -130226497 + (A)n Simple_repeat Simple_repeat 1 23 0 2420 132 32 56 chr5 69404055 69404126 -130226024 - Tigger2 DNA MER2_type 0 2718 2647 1525 184 52 3 chr5 69404126 69404414 -130225736 - AluJo SINE Alu -6 306 5 2420 132 32 56 chr5 69404414 69404805 -130225345 - Tigger2 DNA MER2_type -71 2647 2267 469 159 0 0 chr5 69404789 69404858 -130225292 - Tigger2 DNA MER2_type -2649 69 1 * 234 0 0 0 chr5 69404877 69404903 -130225247 + (TA)n Simple_repeat Simple_repeat 1 26 0 1406 186 71 0 chr5 69404905 69405157 -130224993 - AluJb SINE Alu -38 274 5 201 74 0 0 chr5 69405182 69405209 -130224941 + (TG)n Simple_repeat Simple_repeat 2 28 0 385 191 99 19 chr5 69405801 69405963 -130224187 - L1ME4a LINE L1 -8 6113 5939 232 351 54 0 chr5 69406335 69406446 -130223704 + MIR SINE MIR 83 199 -63 2196 126 0 3 chr5 69407244 69407554 -130222596 + AluSx SINE Alu 1 309 -3 345 161 19 129 chr5 69407559 69407714 -130222436 + L1MC2 LINE L1 5258 5395 -938 * 1012 110 23 40 chr5 69407699 69407872 -130222278 + AluSc SINE Alu 123 292 -17 5311 170 18 4 chr5 69407872 69408805 -130221345 + L1MC2 LINE L1 5390 6335 -9 230 191 0 16 chr5 69409379 69409442 -130220708 + GA-rich Low_complexity Low_complexity 3 64 0 333 363 100 6 chr5 69409862 69410022 -130220128 - MIR3 SINE MIR -15 193 19 436 229 8 16 chr5 69410539 69410661 -130219489 - AluJb SINE Alu -190 122 2 2195 120 0 3 chr5 69410664 69410956 -130219194 - AluSx SINE Alu -21 291 1 44 20 0 0 chr5 69410957 69411008 -130219142 + AT_rich Low_complexity Low_complexity 1 51 0 185 215 27 0 chr5 69411011 69411160 -130218990 + (TA)n Simple_repeat Simple_repeat 2 154 0 58 15 0 0 chr5 69411160 69411225 -130218925 + AT_rich Low_complexity Low_complexity 1 65 0 3557 198 29 59 chr5 69416187 69417177 -130212973 + LTR5 LTR ERVK 9 969 0 300 263 34 59 chr5 69417201 69417319 -130212831 + MIR SINE MIR 126 240 -22 28905 58 2 12 chr5 69421251 69423684 -130206466 + L1PA6 LINE L1 1669 4035 -2179 2404 86 0 13 chr5 69423684 69423997 -130206153 + AluY SINE Alu 1 309 -2 28905 58 2 12 chr5 69423997 69426157 -130203993 + L1PA6 LINE L1 4035 6214 0 180 0 0 0 chr5 69426163 69426183 -130203967 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 195 129 0 0 chr5 69427586 69427617 -130202533 + (T)n Simple_repeat Simple_repeat 1 31 0 383 266 35 35 chr5 69428311 69428424 -130201726 - MIR SINE MIR -65 143 31 206 250 0 0 chr5 69428814 69428866 -130201284 + (TAA)n Simple_repeat Simple_repeat 2 53 0 522 281 58 40 chr5 69428883 69429107 -130201043 - MIR SINE MIR -26 236 9 32 91 0 0 chr5 69430269 69430357 -130199793 + AT_rich Low_complexity Low_complexity 1 88 0 383 263 32 11 chr5 69430520 69430615 -130199535 - L2 LINE L2 -15 3298 3202 1420 99 15 142 chr5 69430616 69430948 -130199202 + AluSc SINE Alu 1 290 -9 1496 136 57 91 chr5 69431261 69431867 -130198283 + L1MCa LINE L1 1260 1932 -4494 1901 105 4 0 chr5 69431868 69432125 -130198025 + AluSp SINE Alu 38 295 -18 315 326 30 39 chr5 69432151 69432384 -130197766 + L2 LINE L2 2283 2513 -801 216 0 0 0 chr5 69432815 69432839 -130197311 + (A)n Simple_repeat Simple_repeat 1 24 0 225 0 0 0 chr5 69432858 69432883 -130197267 + (T)n Simple_repeat Simple_repeat 1 25 0 2321 67 0 0 chr5 69434140 69434452 -130195698 + AluY SINE Alu 1 312 0 246 118 0 39 chr5 69434532 69434583 -130195567 - Alu SINE Alu -2 306 258 1796 117 43 21 chr5 69435186 69435501 -130194649 + AluSq SINE Alu 1 321 0 4962 153 52 46 chr5 69437307 69438298 -130191852 + L1MCa LINE L1 1 997 -5429 1016 213 7 11 chr5 69438303 69438506 -130191644 - MLT1A1 LTR MaLR -8 420 156 279 0 0 0 chr5 69438515 69438546 -130191604 + (TTA)n Simple_repeat Simple_repeat 3 33 0 30166 57 2 5 chr5 69438546 69443109 -130187041 - L1PA6 LINE L1 -18 6136 1591 593 248 48 0 chr5 69443115 69443260 -130186890 - MLT1A1 LTR MaLR -213 152 1 4104 132 149 87 chr5 69443261 69443331 -130186819 + L1MCa LINE L1 995 1059 -5367 2033 115 32 0 chr5 69443331 69443646 -130186504 + AluSq SINE Alu 1 324 0 4104 132 149 87 chr5 69443646 69444458 -130185692 + L1MCa LINE L1 1059 1968 -4458 1841 102 4 0 chr5 69444458 69444749 -130185401 + AluSp SINE Alu 38 329 0 4104 132 149 87 chr5 69444749 69444981 -130185169 + L1MCa LINE L1 1968 2184 -4242 24 32 0 0 chr5 69445024 69445055 -130185095 + AT_rich Low_complexity Low_complexity 1 31 0 900 144 0 0 chr5 69445055 69445173 -130184977 - FLAM_C SINE Alu -15 118 1 960 211 12 37 chr5 69445173 69445419 -130184731 + L1MA10 LINE L1 6093 6332 -2 275 188 188 0 chr5 69445848 69445949 -130184201 + L1MCa LINE L1 2069 2188 -4238 22 35 0 0 chr5 69445988 69446017 -130184133 + AT_rich Low_complexity Low_complexity 1 29 0 448 143 0 157 chr5 69446017 69446157 -130183993 - FLAM_C SINE Alu -15 118 1 751 233 6 0 chr5 69446258 69446421 -130183729 + L1MA10 LINE L1 6169 6332 -2 385 274 62 9 chr5 69447159 69447272 -130182878 + L2 LINE L2 3189 3307 -6 231 189 0 0 chr5 69447403 69447456 -130182694 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 243 211 67 87 chr5 69449879 69449983 -130180167 - MIR SINE MIR -50 212 111 467 290 221 27 chr5 69450958 69451220 -130178930 - L3 LINE CR1 -11 1566 1254 2006 136 3 0 chr5 69451221 69451535 -130178615 - AluSq SINE Alu 0 315 1 340 282 141 7 chr5 69451579 69451728 -130178422 + MER117 DNA MER1_type 3 171 -26 642 291 39 6 chr5 69451841 69452023 -130178127 - L3 LINE CR1 -464 1113 926 3735 267 87 23 chr5 69452267 69453836 -130176314 - L2 LINE L2 -1 3312 1651 550 297 44 44 chr5 69454557 69454830 -130175320 - L2 LINE L2 -1 3312 3040 373 283 53 35 chr5 69456112 69456225 -130173925 + MIR SINE MIR 20 134 -74 226 281 24 0 chr5 69456776 69456858 -130173292 - HAL1 LINE L1 -380 2127 2044 442 210 0 109 chr5 69456859 69456890 -130173260 + MER44D DNA MER2_type 1 34 -699 3691 129 4 4 chr5 69456890 69457401 -130172749 + MER9 LTR ERVK 1 511 0 442 210 0 109 chr5 69457401 69457488 -130172662 + MER44D DNA MER2_type 34 106 -627 22 0 0 0 chr5 69457491 69457513 -130172637 + AT_rich Low_complexity Low_complexity 1 22 0 5162 141 28 1 chr5 69457513 69458334 -130171816 - L1PA16 LINE L1 -9 6157 5315 2253 141 31 8 chr5 69458337 69458692 -130171458 - L1PA13 LINE L1 -8 6155 5793 3619 155 19 32 chr5 69458693 69458932 -130171218 + MER44D DNA MER2_type 110 350 -2137 1957 117 0 4 chr5 69458932 69459198 -130170952 + AluSx SINE Alu 37 301 -11 3619 155 19 32 chr5 69459198 69459590 -130170560 + MER44D DNA MER2_type 350 605 0 409 233 48 97 chr5 69459605 69459833 -130170317 - HAL1 LINE L1 -482 2025 1809 30 27 0 0 chr5 69460029 69460066 -130170084 + AT_rich Low_complexity Low_complexity 1 37 0 465 227 178 20 chr5 69460085 69460335 -130169815 - MLT2E LTR ERVL -13 615 239 2511 141 2 20 chr5 69460540 69460936 -130169214 + MLT1B LTR MaLR 2 390 0 702 153 0 40 chr5 69461001 69461125 -130169025 - L1PA10 LINE L1 -1 6167 6049 390 213 9 83 chr5 69461145 69461205 -130168945 - MIR SINE MIR -4 258 208 1734 118 4 0 chr5 69461205 69461434 -130168716 + MER30 DNA MER1_type 1 230 0 390 213 9 83 chr5 69461434 69461481 -130168669 - MIR SINE MIR -54 208 159 1081 132 26 32 chr5 69461488 69461677 -130168473 - MLT1B LTR MaLR -201 189 2 537 252 0 0 chr5 69461835 69461942 -130168208 - MIR SINE MIR -113 149 43 1487 155 103 0 chr5 69462325 69462577 -130167573 - AluJb SINE Alu -18 294 17 2139 101 42 0 chr5 69462589 69462876 -130167274 - AluSq SINE Alu -14 299 1 710 278 126 5 chr5 69463418 69463641 -130166509 - MIR SINE MIR -3 259 10 216 0 0 0 chr5 69463685 69463709 -130166441 + (T)n Simple_repeat Simple_repeat 1 24 0 2176 114 0 0 chr5 69463983 69464273 -130165877 - AluSx SINE Alu -22 290 1 806 163 31 0 chr5 69464984 69465113 -130165037 - AluJo SINE Alu -178 134 2 1012 189 0 6 chr5 69465199 69465379 -130164771 - FRAM SINE Alu -2 174 1 750 236 22 22 chr5 69466296 69466474 -130163676 + MER45A DNA AcHobo 1 178 0 679 273 77 10 chr5 69466537 69466746 -130163404 - MER58A DNA MER1_type -1 223 1 318 265 109 41 chr5 69466899 69467046 -130163104 - MIR SINE MIR -41 221 65 28 0 0 0 chr5 69467152 69467180 -130162970 + AT_rich Low_complexity Low_complexity 1 28 0 2044 129 14 0 chr5 69468099 69468416 -130161734 + AluSx SINE Alu 1 321 0 1267 256 72 55 chr5 69469635 69470162 -130159988 - MLT1F LTR MaLR 0 542 7 507 279 0 14 chr5 69470163 69470303 -130159847 + MARNA DNA Mariner 264 401 -185 2187 129 3 0 chr5 69471593 69471903 -130158247 - AluSx SINE Alu -1 311 1 229 372 26 0 chr5 69473189 69473302 -130156848 - L2 LINE L2 -14 3299 3184 2245 122 3 0 chr5 69473438 69473750 -130156400 - AluSq SINE Alu 0 313 1 649 259 125 9 chr5 69473846 69474078 -130156072 - MIR SINE MIR 0 262 4 776 157 0 0 chr5 69474567 69474682 -130155468 - FLAM_C SINE Alu -26 117 3 1797 156 28 0 chr5 69475794 69476076 -130154074 + AluJo SINE Alu 5 294 -18 191 233 100 0 chr5 69476700 69476760 -130153390 - MER5A DNA MER1_type -84 105 40 251 231 145 51 chr5 69476858 69476975 -130153175 + L2 LINE L2 3185 3312 -1 183 167 0 28 chr5 69478530 69478566 -130151584 - MIR SINE MIR -5 257 223 40 21 0 0 chr5 69479358 69479405 -130150745 + AT_rich Low_complexity Low_complexity 1 47 0 1318 185 124 33 chr5 69479432 69479767 -130150383 + MLT1A1 LTR MaLR 1 457 0 526 233 73 40 chr5 69479783 69479933 -130150217 + L2 LINE L2 3159 3313 0 192 244 0 0 chr5 69479933 69479974 -130150176 - MIR SINE MIR -70 192 152 974 124 0 26 chr5 69479975 69480128 -130150022 - FRAM SINE Alu -3 173 25 199 118 66 0 chr5 69480143 69480219 -130149931 + (TA)n Simple_repeat Simple_repeat 1 81 0 674 258 0 0 chr5 69480234 69480362 -130149788 - FLAM_C SINE Alu -14 129 2 229 319 33 0 chr5 69480365 69480456 -130149694 - MIR SINE MIR -98 164 71 1850 158 0 0 chr5 69481536 69481821 -130148329 - AluSx SINE Alu -7 305 21 2319 193 13 19 chr5 69481963 69482440 -130147710 + L1MB8 LINE L1 5705 6178 0 579 143 62 219 chr5 69483397 69483591 -130146559 - MER5A DNA MER1_type 0 189 33 201 39 0 0 chr5 69483591 69483617 -130146533 + (CTG)n Simple_repeat Simple_repeat 1 26 0 579 143 62 219 chr5 69483617 69483646 -130146504 - MER5A DNA MER1_type -156 33 1 4456 120 96 107 chr5 69484412 69485836 -130144314 + pTR5 LTR ERV1 741 2438 0 428 266 93 7 chr5 69485845 69485984 -130144166 - L1ME3A LINE L1 -31 6139 5989 2373 78 0 0 chr5 69486013 69486330 -130143820 - AluY SINE Alu 0 317 1 5361 141 29 27 chr5 69486336 69487297 -130142853 - L1MA7 LINE L1 -1 6290 5328 2126 139 0 0 chr5 69487311 69487620 -130142530 - AluSx SINE Alu -1 311 3 305 167 21 13 chr5 69487626 69487704 -130142446 - L1ME3A LINE L1 -208 5956 5877 23 0 0 0 chr5 69487733 69487756 -130142394 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 69487813 69487838 -130142312 + AT_rich Low_complexity Low_complexity 1 25 0 519 243 7 11 chr5 69487853 69487965 -130142185 - L1ME3A LINE L1 -332 5830 5725 1583 185 173 30 chr5 69487965 69488365 -130141785 + MSTB2 LTR MaLR 1 457 0 519 243 7 11 chr5 69488365 69488390 -130141760 - L1ME3A LINE L1 -437 5725 5701 540 156 24 168 chr5 69488390 69488444 -130141706 - MLT1D LTR MaLR -360 145 85 825 178 0 0 chr5 69488444 69488562 -130141588 - FLAM_C SINE Alu -15 118 1 540 156 24 168 chr5 69488562 69488674 -130141476 - MLT1D LTR MaLR -420 85 3 365 239 216 22 chr5 69488916 69489138 -130141012 - L1ME LINE L1 -328 5793 5529 732 296 6 0 chr5 69489350 69489526 -130140624 - MER45A DNA AcHobo -1 177 1 188 250 23 125 chr5 69489750 69489838 -130140312 - MER5A DNA MER1_type -8 181 103 * 233 254 0 0 chr5 69489832 69489887 -130140263 + MER5A DNA MER1_type 135 189 0 475 258 16 23 chr5 69489967 69490095 -130140055 - MER5A DNA MER1_type -1 188 62 399 153 0 45 chr5 69490255 69490366 -130139784 + GA-rich Low_complexity Low_complexity 2 107 0 427 302 28 60 chr5 69492436 69492618 -130137532 - MIR3 SINE MIR -23 185 10 1525 187 58 71 chr5 69493076 69493471 -130136679 + MLT1B LTR MaLR 1 390 0 4250 154 22 12 chr5 69493471 69494196 -130135954 + MLT1B-int LTR MaLR 1 732 -639 320 301 68 0 chr5 69494299 69494402 -130135748 + MLT1B-int LTR MaLR 680 789 -946 1789 255 47 1 chr5 69494494 69494946 -130135204 + MLT1B-int LTR MaLR 950 1735 0 1202 191 45 122 chr5 69494948 69495110 -130135040 + MLT1B LTR MaLR 3 176 -214 2303 103 0 3 chr5 69495110 69495421 -130134729 + AluSg SINE Alu 1 310 0 1202 191 45 122 chr5 69495421 69495491 -130134659 + MLT1B LTR MaLR 176 250 -140 12060 22 0 0 chr5 69495491 69497580 -130132570 + L1PA2 LINE L1 4067 6155 0 1202 191 45 122 chr5 69497580 69497765 -130132385 + MLT1B LTR MaLR 250 389 -1 31 0 0 0 chr5 69497955 69497986 -130132164 + AT_rich Low_complexity Low_complexity 1 31 0 2078 168 12 66 chr5 69498541 69498952 -130131198 - MLT1B LTR MaLR -1 389 1 222 91 0 0 chr5 69499557 69499590 -130130560 + (TG)n Simple_repeat Simple_repeat 2 34 0 327 49 0 0 chr5 69499700 69499741 -130130409 + (TC)n Simple_repeat Simple_repeat 1 41 0 240 35 0 0 chr5 69499740 69499769 -130130381 + (CA)n Simple_repeat Simple_repeat 1 29 0 * 312 221 0 33 chr5 69501018 69501140 -130129010 + CT-rich Low_complexity Low_complexity 1 118 0 793 143 23 11 chr5 69501151 69501326 -130128824 + CT-rich Low_complexity Low_complexity 1 177 0 1806 161 0 30 chr5 69501338 69501637 -130128513 - AluJo SINE Alu -22 290 1 2181 79 55 3 chr5 69502449 69502740 -130127410 - AluSc SINE Alu -1 308 3 191 376 18 99 chr5 69502782 69503114 -130127036 + L2 LINE L2 2966 3270 -2 73 66 0 0 chr5 69503299 69503435 -130126715 + AT_rich Low_complexity Low_complexity 1 136 0 319 318 8 61 chr5 69503488 69503620 -130126530 - L2 LINE L2 -2 3270 3146 1924 136 10 26 chr5 69503864 69504166 -130125984 + AluSx SINE Alu 3 299 -13 956 223 11 11 chr5 69504793 69504977 -130125173 + MER20 DNA MER1_type 36 219 0 2383 103 0 3 chr5 69505293 69505604 -130124546 + AluSq SINE Alu 1 310 -3 349 321 0 76 chr5 69505614 69505745 -130124405 + L2 LINE L2 3189 3309 -4 2442 94 0 0 chr5 69506723 69507032 -130123118 - AluSx SINE Alu -2 310 2 280 244 13 13 chr5 69507606 69507684 -130122466 + MER116 DNA Mariner 3 80 0 587 326 98 18 chr5 69509790 69510228 -130119922 - L1ME3A LINE L1 -281 5889 5417 368 176 132 22 chr5 69510288 69510379 -130119771 - LTR33 LTR ERVL 0 521 421 313 279 38 0 chr5 69510790 69510869 -130119281 + MIR SINE MIR 37 118 -144 230 146 42 0 chr5 69510925 69510973 -130119177 + (CATATA)n Simple_repeat Simple_repeat 1 50 0 251 333 111 67 chr5 69511075 69511612 -130118538 - L2 LINE L2 -27 3245 2686 660 257 72 36 chr5 69511638 69511860 -130118290 + MIR SINE MIR 9 238 -24 348 238 119 40 chr5 69513041 69513167 -130116983 + MIR3 SINE MIR 72 207 -1 1024 196 116 0 chr5 69513394 69513593 -130116557 + MER58A DNA MER1_type 3 224 0 223 189 126 63 chr5 69513999 69514094 -130116056 + L2 LINE L2 2651 2751 -563 2402 66 7 7 chr5 69514094 69514398 -130115752 + AluY SINE Alu 1 304 -7 2245 112 0 0 chr5 69514633 69514928 -130115222 - AluSq SINE Alu -18 295 1 1422 131 56 0 chr5 69515050 69515302 -130114848 - AluJb SINE Alu -24 288 23 267 217 0 0 chr5 69515477 69515523 -130114627 + MLT1A1-int LTR MaLR 687 732 -639 320 301 68 0 chr5 69515626 69515729 -130114421 + MLT1A1-int LTR MaLR 680 789 -946 1789 255 47 1 chr5 69515821 69516273 -130113877 + MLT1A1-int LTR MaLR 950 1735 0 1016 218 104 67 chr5 69516275 69516437 -130113713 + MLT1A1 LTR MaLR 3 158 -270 2303 103 0 3 chr5 69516437 69516748 -130113402 + AluSg SINE Alu 1 310 0 1016 218 104 67 chr5 69516748 69516821 -130113329 + MLT1A1 LTR MaLR 158 227 -201 11425 41 2 1 chr5 69516821 69518924 -130111226 + L1PA6 LINE L1 4067 6167 0 1016 218 104 67 chr5 69518924 69519136 -130111014 + MLT1A1 LTR MaLR 227 420 -8 4995 153 51 46 chr5 69519141 69520133 -130110017 - L1MCa LINE L1 -5429 997 1 182 31 0 62 chr5 69521939 69521971 -130108179 + (TTTTA)n Simple_repeat Simple_repeat 5 34 0 1781 121 43 21 chr5 69521973 69522254 -130107896 - AluSq SINE Alu -26 287 1 246 118 0 39 chr5 69522857 69522908 -130107242 + Alu SINE Alu 258 306 -2 2320 67 0 0 chr5 69522988 69523300 -130106850 - AluY SINE Alu 0 312 1 234 0 0 0 chr5 69524558 69524584 -130105566 + (A)n Simple_repeat Simple_repeat 1 26 0 213 108 0 0 chr5 69524585 69524622 -130105528 + (T)n Simple_repeat Simple_repeat 1 37 0 222 118 0 0 chr5 69524652 69524686 -130105464 + (GAAA)n Simple_repeat Simple_repeat 4 37 0 2252 96 13 0 chr5 69525437 69525740 -130104410 - AluSp SINE Alu -6 307 1 257 291 0 0 chr5 69525740 69525857 -130104293 + T-rich Low_complexity Low_complexity 1 117 0 2215 131 0 0 chr5 69525913 69526218 -130103932 - AluSx SINE Alu -7 305 1 270 209 43 101 chr5 69526301 69526440 -130103710 + L2 LINE L2 3087 3217 -96 351 103 294 0 chr5 69526487 69526555 -130103595 - L2 LINE L2 -5 3308 3221 509 194 20 10 chr5 69526760 69526858 -130103292 + L2 LINE L2 3215 3313 0 918 214 91 29 chr5 69527341 69527551 -130102599 - MER58A DNA MER1_type -1 223 1 447 367 51 14 chr5 69527841 69528195 -130101955 + LTR16B LTR ERVL 20 386 -78 307 259 0 35 chr5 69529040 69529125 -130101025 + GA-rich Low_complexity Low_complexity 3 84 0 336 283 28 19 chr5 69529325 69529431 -130100719 + MIR3 SINE MIR 93 199 -9 574 251 55 0 chr5 69529507 69529670 -130100480 - MLT1J2 LTR MaLR -267 183 12 299 352 31 56 chr5 69529777 69529939 -130100211 + L2 LINE L2 3114 3271 -1 184 342 125 17 chr5 69530017 69530137 -130100013 + L2 LINE L2 2722 2854 -460 229 180 11 45 chr5 69530166 69530255 -130099895 + CT-rich Low_complexity Low_complexity 2 87 0 216 320 40 0 chr5 69530263 69530338 -130099812 - L2 LINE L2 -1 3271 3194 261 279 112 84 chr5 69531087 69531266 -130098884 - MIR3 SINE MIR -22 186 3 2504 81 3 0 chr5 69531993 69532301 -130097849 + AluSp SINE Alu 1 309 -4 769 142 0 25 chr5 69533174 69533294 -130096856 - FLAM_C SINE Alu -15 128 12 1918 146 3 0 chr5 69533310 69533598 -130096552 - AluSg SINE Alu -21 289 1 211 227 15 0 chr5 69534444 69534510 -130095640 + A-rich Low_complexity Low_complexity 4 70 0 643 144 0 0 chr5 69534522 69534612 -130095538 - AluJ/FLAM SINE Alu -221 91 2 2051 101 7 7 chr5 69534927 69535204 -130094946 + AluSp SINE Alu 37 313 0 1952 161 0 13 chr5 69535223 69535534 -130094616 + AluSx SINE Alu 1 307 -5 2252 116 3 0 chr5 69535677 69535980 -130094170 + AluSx SINE Alu 3 306 -6 21 36 0 0 chr5 69536163 69536191 -130093959 + AT_rich Low_complexity Low_complexity 1 28 0 880 45 0 106 chr5 69536308 69536440 -130093710 + L1PA10 LINE L1 6051 6168 0 1454 194 12 115 chr5 69536911 69536993 -130093157 + MLT1A1 LTR MaLR 1 90 -275 1151 118 0 6 chr5 69536993 69537162 -130092988 + L1PB1 LINE L1 5983 6150 -1 1454 194 12 115 chr5 69537162 69537496 -130092654 + MLT1A1 LTR MaLR 90 365 0 220 345 107 60 chr5 69537501 69537980 -130092170 + L2 LINE L2 1712 2212 -1102 501 321 104 13 chr5 69538176 69538484 -130091666 - L2 LINE L2 -1292 2022 1687 684 169 102 0 chr5 69539114 69539232 -130090918 + FLAM_C SINE Alu 2 131 -12 233 0 62 0 chr5 69542390 69542422 -130087728 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1636 169 24 35 chr5 69542431 69542721 -130087429 + AluJb SINE Alu 1 287 -25 1997 218 44 22 chr5 69542853 69543308 -130086842 - MLT1C LTR MaLR 0 467 3 1563 124 27 31 chr5 69543658 69543916 -130086234 - L1MC1 LINE L1 -1 6332 6076 2386 84 0 3 chr5 69543917 69544215 -130085935 - AluY SINE Alu -14 297 1 22 35 0 0 chr5 69544583 69544612 -130085538 + AT_rich Low_complexity Low_complexity 1 29 0 248 288 0 0 chr5 69544940 69544999 -130085151 + MIR SINE MIR 20 78 -184 307 222 0 0 chr5 69545182 69545236 -130084914 - MER96 DNA MER1_type? -84 91 38 248 270 0 90 chr5 69545186 69545275 -130084875 + MER96 DNA MER1_type? 89 169 -6 * 516 263 173 47 chr5 69545275 69545576 -130084574 - LTR16A LTR ERVL -90 360 22 446 253 63 46 chr5 69545578 69545655 -130084495 + L2 LINE L2 3122 3196 -117 2227 64 16 48 chr5 69545655 69545966 -130084184 - AluSq SINE Alu -12 301 1 446 253 63 46 chr5 69545966 69546062 -130084088 + L2 LINE L2 3196 3298 -15 32 91 0 0 chr5 69546225 69546313 -130083837 + AT_rich Low_complexity Low_complexity 1 88 0 522 281 58 40 chr5 69547475 69547699 -130082451 + MIR SINE MIR 9 236 -26 206 250 0 0 chr5 69547716 69547768 -130082382 + (TTA)n Simple_repeat Simple_repeat 2 53 0 377 263 35 44 chr5 69548160 69548274 -130081876 + MIR SINE MIR 31 143 -65 195 129 0 0 chr5 69548968 69548999 -130081151 + (A)n Simple_repeat Simple_repeat 1 31 0 260 70 23 0 chr5 69549160 69549203 -130080947 + (CA)n Simple_repeat Simple_repeat 2 45 0 1938 205 77 56 chr5 69549248 69549340 -130080810 + MLT1E3 LTR MaLR 1 90 -534 2277 155 15 0 chr5 69549340 69549681 -130080469 - MER7A DNA MER2_type -2 344 1 1938 205 77 56 chr5 69549681 69550232 -130079918 + MLT1E3 LTR MaLR 90 624 0 21 57 0 0 chr5 69550668 69550703 -130079447 + AT_rich Low_complexity Low_complexity 1 35 0 2542 131 31 14 chr5 69550727 69551085 -130079065 + THE1B LTR MaLR 1 364 0 407 351 33 0 chr5 69551171 69551322 -130078828 - L2 LINE L2 0 3272 3117 260 210 0 16 chr5 69551331 69551393 -130078757 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 225 0 0 0 chr5 69551414 69551439 -130078711 + (TG)n Simple_repeat Simple_repeat 2 26 0 207 0 0 0 chr5 69551438 69551461 -130078689 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 3848 134 0 17 chr5 69552220 69552756 -130077394 - MER1A DNA MER1_type 0 527 1 232 243 64 93 chr5 69553174 69553314 -130076836 + LTR67 LTR ERVL 5 140 -417 568 342 0 11 chr5 69554413 69554597 -130075553 + MER5A DNA MER1_type 1 182 -7 259 240 125 19 chr5 69554621 69554725 -130075425 - MER5B DNA MER1_type 0 178 64 10411 77 4 10 chr5 69555302 69559391 -130070759 + L1PA6 LINE L1 12 4042 -2160 2416 83 0 13 chr5 69559391 69559704 -130070446 + AluY SINE Alu 1 309 -2 10411 77 4 10 chr5 69559704 69561852 -130068298 + L1PA6 LINE L1 4042 6202 0 180 0 0 0 chr5 69561858 69561878 -130068272 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 185 356 58 19 chr5 69562415 69562519 -130067631 - MIR3 SINE MIR -6 202 95 233 320 124 42 chr5 69563778 69563936 -130066214 + MER5A DNA MER1_type 1 185 -4 403 304 48 24 chr5 69564372 69564651 -130065499 - L1MC/D LINE L1 -297 5824 5553 808 182 0 0 chr5 69564651 69564783 -130065367 + FLAM_A SINE Alu 1 132 -1 403 304 48 24 chr5 69564783 69565054 -130065096 - L1MC/D LINE L1 -568 5553 5263 316 326 30 39 chr5 69565309 69565542 -130064608 - L2 LINE L2 -801 2513 2283 1906 93 4 0 chr5 69565568 69565814 -130064336 - AluSq SINE Alu -18 295 49 374 256 47 0 chr5 69566294 69566380 -130063770 - MIR SINE MIR -121 141 52 204 292 0 0 chr5 69566415 69566463 -130063687 - L2 LINE L2 -1035 2279 2232 2300 160 26 26 chr5 69566543 69566968 -130063182 + MSTB2 LTR MaLR 26 450 -7 654 209 0 0 chr5 69566976 69567091 -130063059 + MER45A DNA AcHobo 64 178 0 899 135 0 0 chr5 69568208 69568334 -130061816 - FLAM_C SINE Alu -17 126 1 315 285 209 17 chr5 69568345 69568517 -130061633 - MIR SINE MIR -12 250 46 372 245 117 0 chr5 69568619 69568713 -130061437 - MIR SINE MIR -86 176 72 1920 195 0 24 chr5 69570406 69570831 -130059319 + L1ME1 LINE L1 5560 5974 -192 433 222 8 8 chr5 69570848 69570974 -130059176 + L1MA10 LINE L1 6206 6331 -3 2508 63 7 0 chr5 69571884 69572185 -130057965 + AluY SINE Alu 1 303 -8 599 250 217 9 chr5 69572321 69572533 -130057617 - MIR SINE MIR -5 257 2 360 278 6 87 chr5 69573643 69573816 -130056334 + L1M4 LINE L1 4270 4428 -1718 564 235 0 17 chr5 69574043 69574199 -130055951 - FLAM_A SINE Alu 0 154 1 359 273 44 9 chr5 69574482 69574709 -130055441 + L1M4 LINE L1 5065 5299 -847 9964 207 87 5 chr5 69574736 69577714 -130052436 + L1PA13 LINE L1 1 3238 -3559 1805 192 3 3 chr5 69577684 69578074 -130052076 + L1P LINE L1 4989 5378 -1419 * 2424 91 11 17 chr5 69578074 69578435 -130051715 + THE1B LTR MaLR 6 364 0 3615 149 46 3 chr5 69578437 69579133 -130051017 + L1P LINE L1 4636 5361 -785 254 113 0 19 chr5 69579150 69579203 -130050947 + (TC)n Simple_repeat Simple_repeat 2 53 0 261 57 0 0 chr5 69579203 69579238 -130050912 + (CA)n Simple_repeat Simple_repeat 1 35 0 197 363 35 9 chr5 69579262 69579375 -130050775 - MER5A DNA MER1_type -6 183 68 * 278 314 26 39 chr5 69579279 69579381 -130050769 + MER5A DNA MER1_type 36 137 -52 2252 120 0 0 chr5 69579381 69579682 -130050468 + AluSx SINE Alu 1 301 -11 278 314 26 39 chr5 69579682 69579732 -130050418 + MER5A DNA MER1_type 137 186 -3 2291 95 3 16 chr5 69580553 69580857 -130049293 + AluSq SINE Alu 1 300 -13 315 302 0 0 chr5 69581097 69581193 -130048957 - MIR SINE MIR -77 185 90 2506 58 10 0 chr5 69581513 69581821 -130048329 - AluY SINE Alu 0 311 1 297 0 0 0 chr5 69583164 69583197 -130046953 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 644 147 17 9 chr5 69583517 69583633 -130046517 + MLT1C LTR MaLR 351 467 0 1235 98 0 0 chr5 69583805 69583958 -130046192 + AluSg SINE Alu 1 153 -157 531 205 16 25 chr5 69584059 69584181 -130045969 - MER2 DNA MER2_type -223 122 2 779 269 63 8 chr5 69584308 69584546 -130045604 - MIR SINE MIR 0 262 12 2176 99 7 20 chr5 69585041 69585344 -130044806 - AluSp SINE Alu -14 299 1 808 302 33 12 chr5 69585344 69585589 -130044561 + MIR SINE MIR 8 257 -5 390 115 0 0 chr5 69585590 69585651 -130044499 + (CAT)n Simple_repeat Simple_repeat 1 61 0 257 154 0 0 chr5 69585963 69586002 -130044148 + L2 LINE L2 3217 3255 -17 2288 108 7 0 chr5 69586497 69586803 -130043347 + AluSx SINE Alu 1 308 -4 1703 131 0 0 chr5 69587091 69587336 -130042814 - AluSg SINE Alu -65 245 1 5372 153 23 39 chr5 69587580 69588371 -130041779 - L1PA16 LINE L1 -1 6165 5362 2218 125 0 0 chr5 69588371 69588674 -130041476 - AluSx SINE Alu -9 303 1 5372 153 23 39 chr5 69588674 69588737 -130041413 - L1PA16 LINE L1 -804 5362 5299 3942 51 0 0 chr5 69588737 69589223 -130040927 - L1PA7 LINE L1 0 6154 5669 5372 153 23 39 chr5 69589223 69590401 -130039749 - L1PA16 LINE L1 -867 5299 4129 2080 140 7 0 chr5 69590401 69590694 -130039456 - AluSx SINE Alu -17 295 1 297 0 0 0 chr5 69590737 69590770 -130039380 + (A)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr5 69590940 69590961 -130039189 + AT_rich Low_complexity Low_complexity 1 21 0 1013 212 10 47 chr5 69590961 69591258 -130038892 + MER93b LTR ERV1 1 286 -87 455 343 35 38 chr5 69591383 69591727 -130038423 - L1M4 LINE L1 -1082 5064 4722 213 108 0 0 chr5 69592476 69592513 -130037637 + (GA)n Simple_repeat Simple_repeat 1 37 0 1349 209 16 73 chr5 69592526 69592755 -130037395 - MLT1A1 LTR MaLR -4 361 161 1929 109 22 0 chr5 69592755 69593022 -130037128 - AluSp SINE Alu -14 299 27 1349 209 16 73 chr5 69593022 69593175 -130036975 - MLT1A1 LTR MaLR -204 161 1 498 221 18 18 chr5 69593377 69593490 -130036660 + MER81 DNA DNA 1 113 -1 461 261 186 43 chr5 69593965 69594237 -130035913 - L1MC4a LINE L1 -1885 5923 5691 2185 127 0 3 chr5 69594237 69594537 -130035613 - AluSx SINE Alu -13 299 1 461 261 186 43 chr5 69594537 69594696 -130035454 - L1MC4a LINE L1 -2117 5691 5556 1934 136 3 17 chr5 69594696 69595027 -130035123 - AluSx SINE Alu 0 312 1 461 261 186 43 chr5 69595027 69595179 -130034971 - L1MC4a LINE L1 -2252 5556 5255 1996 141 7 10 chr5 69595441 69595739 -130034411 + AluJb SINE Alu 3 299 -13 21 36 0 0 chr5 69595787 69595815 -130034335 + AT_rich Low_complexity Low_complexity 1 28 0 481 312 65 15 chr5 69597005 69597204 -130032946 - MIR SINE MIR -30 232 24 2215 130 64 32 chr5 69597415 69597930 -130032220 - MLT2A2 LTR ERVL 0 554 1 393 224 41 0 chr5 69598135 69598233 -130031917 - MIR3 SINE MIR -10 198 97 615 309 27 27 chr5 69598428 69598651 -130031499 - MIR SINE MIR -20 242 20 228 163 0 0 chr5 69599520 69599563 -130030587 + (CA)n Simple_repeat Simple_repeat 1 43 0 262 223 117 0 chr5 69599736 69599839 -130030311 + L1 LINE L1 2895 3009 -3137 1473 208 8 39 chr5 69599847 69600231 -130029919 - MER93b LTR ERV1 -1 372 1 306 0 0 0 chr5 69600421 69600455 -130029695 + (T)n Simple_repeat Simple_repeat 1 34 0 587 179 0 0 chr5 69600498 69600604 -130029546 + AluSq/x SINE Alu 1 106 -207 226 340 44 100 chr5 69601001 69601272 -130028878 - L2 LINE L2 -814 2500 2245 2254 123 0 0 chr5 69602100 69602408 -130027742 - AluSx SINE Alu -4 308 1 200 318 0 16 chr5 69602586 69602712 -130027438 + (CATATA)n Simple_repeat Simple_repeat 3 126 0 300 320 0 0 chr5 69603238 69603316 -130026834 - MIR SINE MIR -75 187 110 208 323 91 69 chr5 69604826 69605176 -130024974 - L2 LINE L2 -2289 1025 668 187 333 83 38 chr5 69605400 69605532 -130024618 + L2 LINE L2 3134 3271 -1 1819 184 3 0 chr5 69605573 69605877 -130024273 - AluJo SINE Alu -7 305 1 735 244 86 48 chr5 69606275 69606672 -130023478 + HAL1 LINE L1 2044 2455 -52 2343 92 0 7 chr5 69606737 69607040 -130023110 + AluY SINE Alu 1 301 -10 2203 125 0 0 chr5 69607271 69607575 -130022575 + AluSg SINE Alu 1 304 -6 451 274 41 20 chr5 69608116 69608313 -130021837 - L1ME3A LINE L1 -285 5885 5685 481 171 12 200 chr5 69608386 69608478 -130021672 + MER5A DNA MER1_type 50 97 -92 1911 130 4 7 chr5 69608478 69608754 -130021396 - AluSx SINE Alu -1 311 37 481 171 12 200 chr5 69608754 69608831 -130021319 + MER5A DNA MER1_type 97 187 -2 545 298 132 38 chr5 69608858 69609200 -130020950 - L1MDa LINE L1 -3625 2915 2542 2343 97 10 0 chr5 69609256 69609565 -130020585 - AluSx SINE Alu 0 312 1 2280 77 0 13 chr5 69609797 69610097 -130020053 - AluY SINE Alu -2 309 14 369 308 105 6 chr5 69610281 69610615 -130019535 - L1MDa LINE L1 -4550 1990 1624 265 271 31 0 chr5 69610834 69610930 -130019220 - L1MDa LINE L1 -5301 1229 1131 387 73 0 0 chr5 69610944 69610999 -130019151 + (TG)n Simple_repeat Simple_repeat 2 56 0 1987 145 0 16 chr5 69611103 69611406 -130018744 - AluSx SINE Alu -14 298 1 305 317 55 45 chr5 69611927 69612036 -130018114 + L1MC4a LINE L1 5831 5944 -1864 2165 120 0 0 chr5 69612036 69612327 -130017823 + AluSx SINE Alu 6 296 -16 305 317 55 45 chr5 69612327 69612419 -130017731 + L1MC4a LINE L1 5944 6034 -1774 645 216 72 0 chr5 69612642 69612795 -130017355 + MIR SINE MIR 99 262 0 2067 111 3 0 chr5 69612874 69613163 -130016987 - AluSg SINE Alu -20 290 1 263 303 18 9 chr5 69613165 69613274 -130016876 + MIR SINE MIR 45 154 -108 787 204 68 46 chr5 69613312 69613376 -130016774 + L1MC5 LINE L1 7621 7682 -279 1621 179 10 17 chr5 69613376 69613677 -130016473 - AluJb SINE Alu -13 299 1 787 204 68 46 chr5 69613677 69613892 -130016258 + L1MC5 LINE L1 7682 7906 -55 437 246 62 62 chr5 69614720 69614915 -130015235 - HAL1 LINE L1 -1820 687 493 265 250 0 0 chr5 69615021 69615077 -130015073 - L2 LINE L2 -10 3303 3248 207 0 0 0 chr5 69615129 69615152 -130014998 + (A)n Simple_repeat Simple_repeat 1 23 0 2162 109 10 26 chr5 69615365 69615677 -130014473 - AluSx SINE Alu -4 308 2 736 161 158 182 chr5 69615852 69616143 -130014007 + Charlie1a DNA MER1_type 1 284 -1171 446 163 244 0 chr5 69616975 69617061 -130013089 + U6 snRNA snRNA 1 107 0 * 2668 167 113 60 chr5 69617055 69617546 -130012604 + Charlie1a DNA MER1_type 261 724 -2037 806 174 0 0 chr5 69617546 69617667 -130012483 - FLAM_A SINE Alu -12 121 1 2668 167 113 60 chr5 69617667 69617695 -130012455 + Charlie1a DNA MER1_type 724 749 -2012 213 94 0 0 chr5 69617695 69617727 -130012423 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2668 167 113 60 chr5 69617727 69618026 -130012124 + Charlie1a DNA MER1_type 749 1180 -1581 3988 62 4 6 chr5 69618026 69618513 -130011637 - L1PA8 LINE L1 -1 6171 5686 2668 167 113 60 chr5 69618513 69618598 -130011552 + Charlie1a DNA MER1_type 1180 1259 -196 1078 186 17 74 chr5 69618598 69618829 -130011321 + MER20 DNA MER1_type 1 218 -1 2215 116 0 7 chr5 69619013 69619316 -130010834 - AluSx SINE Alu -11 301 1 2483 76 0 0 chr5 69619327 69619628 -130010522 - AluY SINE Alu -10 301 1 1718 205 49 35 chr5 69620127 69620366 -130009784 + MLT1C LTR MaLR 35 284 -183 2444 59 10 3 chr5 69620366 69620669 -130009481 - AluY SINE Alu -6 305 1 1718 205 49 35 chr5 69620669 69620854 -130009296 + MLT1C LTR MaLR 284 465 -2 296 394 12 6 chr5 69620860 69621020 -130009130 - L3 LINE CR1 -59 1518 1358 2230 109 0 13 chr5 69621046 69621359 -130008791 - AluSc SINE Alu 0 309 1 1668 119 4 16 chr5 69672444 69672688 -129957462 + AluSp SINE Alu 57 297 -16 356 190 0 10 chr5 69675590 69675690 -129954460 + GA-rich Low_complexity Low_complexity 1 99 0 204 164 55 18 chr5 69675721 69675776 -129954374 + (CCGGA)n Simple_repeat Simple_repeat 2 58 0 191 81 81 27 chr5 69675799 69675873 -129954277 + (CGACG)n Simple_repeat Simple_repeat 2 79 0 323 71 82 0 chr5 69678062 69678147 -129952003 + (TA)n Simple_repeat Simple_repeat 1 92 0 1407 121 5 0 chr5 69678147 69678345 -129951805 - AluSg/x SINE Alu -10 302 104 2223 102 0 16 chr5 69678386 69678689 -129951461 + AluSq SINE Alu 1 298 -15 1230 159 44 24 chr5 69678689 69678940 -129951210 - MLT1B LTR MaLR -134 256 1 223 299 56 28 chr5 69685348 69685455 -129944695 - L2 LINE L2 -43 3270 3161 1934 152 71 0 chr5 69685492 69685815 -129944335 - MER7A DNA MER2_type -1 345 2 2421 95 3 7 chr5 69685904 69686210 -129943940 - AluSx SINE Alu -7 305 1 563 171 92 7 chr5 69686299 69686451 -129943699 + L1M1 LINE L1 3353 3517 -4048 2720 222 159 9 chr5 69686992 69687727 -129942423 + L1 LINE L1 23 867 -6342 * 2759 167 8 6 chr5 69687724 69688232 -129941918 + L1 LINE L1 5588 6096 -1112 354 221 29 10 chr5 69688709 69688813 -129941337 - MIR SINE MIR -72 190 85 2118 107 7 10 chr5 69689235 69689534 -129940616 - AluSx SINE Alu -14 298 1 511 266 101 88 chr5 69689676 69690111 -129940039 - L2 LINE L2 -64 3208 2767 592 296 6 11 chr5 69690111 69690290 -129939860 + MER5B DNA MER1_type 1 178 0 511 266 101 88 chr5 69690290 69690326 -129939824 - L2 LINE L2 -505 2767 2733 2244 122 0 0 chr5 69690470 69690774 -129939376 - AluSq SINE Alu -9 304 1 203 182 0 23 chr5 69691143 69691187 -129938963 + (CAA)n Simple_repeat Simple_repeat 2 44 0 2260 121 0 3 chr5 69691373 69691680 -129938470 - AluSx SINE Alu -6 306 1 23 0 0 0 chr5 69692379 69692402 -129937748 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 69692418 69692441 -129937709 + AT_rich Low_complexity Low_complexity 1 23 0 977 161 7 0 chr5 69693426 69693575 -129936575 - AluSq SINE Alu -160 153 4 838 171 0 0 chr5 69693641 69693764 -129936386 - MER58B DNA MER1_type 0 341 219 227 250 0 0 chr5 69693780 69693832 -129936318 - MER58B DNA MER1_type -287 54 3 420 239 277 13 chr5 69693833 69693988 -129936162 + MIR SINE MIR 16 211 -51 21 0 0 0 chr5 69694265 69694286 -129935864 + AT_rich Low_complexity Low_complexity 1 21 0 2199 107 3 7 chr5 69694298 69694587 -129935563 - AluSx SINE Alu -24 288 1 2215 103 3 7 chr5 69695166 69695458 -129934692 - AluSg SINE Alu -19 291 1 976 136 29 0 chr5 69695488 69695628 -129934522 - FRAM SINE Alu -21 155 12 274 281 41 83 chr5 69695641 69695762 -129934388 + MIR3 SINE MIR 45 160 -48 1927 158 3 3 chr5 69696206 69696510 -129933640 - AluJb SINE Alu 0 312 9 357 240 0 78 chr5 69697989 69698118 -129932032 + MER91B DNA MER1_type 4 122 -68 507 191 19 0 chr5 69698214 69698319 -129931831 - L1MA10 LINE L1 0 6334 6228 485 241 22 88 chr5 69698321 69698560 -129931590 - L1ME2 LINE L1 -124 6042 5822 180 0 0 0 chr5 69698842 69698862 -129931288 + (T)n Simple_repeat Simple_repeat 1 20 0 200 122 0 24 chr5 69698912 69698953 -129931197 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1767 246 10 2 chr5 69698955 69699350 -129930800 - L1ME2 LINE L1 -343 5823 5426 1673 162 31 52 chr5 69699406 69699789 -129930361 + THE1C LTR MaLR 1 375 0 2472 161 48 4 chr5 69699828 69700326 -129929824 - L1MB4 LINE L1 -1 6179 5660 469 165 0 0 chr5 69700327 69700405 -129929745 - L1ME2 LINE L1 -733 5433 5353 1493 171 3 74 chr5 69700405 69700576 -129929574 - AluJo SINE Alu -15 297 156 2362 101 3 0 chr5 69700576 69700883 -129929267 - AluY SINE Alu -2 309 2 1493 171 3 74 chr5 69700883 69701021 -129929129 - AluJo SINE Alu -156 156 10 1323 223 15 7 chr5 69701041 69701310 -129928840 - AluJb SINE Alu -41 271 1 1123 204 67 58 chr5 69701311 69701462 -129928688 - L1ME2 LINE L1 -780 5366 5218 2193 134 0 0 chr5 69701462 69701752 -129928398 + AluSg SINE Alu 3 292 -18 1123 204 67 58 chr5 69701752 69702045 -129928105 - L1ME2 LINE L1 -928 5218 4918 2163 141 33 30 chr5 69702744 69703107 -129927043 - THE1B LTR MaLR 0 364 1 10269 104 81 1 chr5 69703107 69704570 -129925580 - THE1B-int LTR MaLR 0 1580 1 2168 127 36 33 chr5 69704570 69704933 -129925217 - THE1B LTR MaLR 0 364 1 571 301 54 5 chr5 69705380 69705566 -129924584 + Charlie8 DNA MER1_type 59 253 -2164 742 253 6 6 chr5 69705612 69705790 -129924360 - MER5B DNA MER1_type 0 178 1 546 248 157 0 chr5 69705803 69705956 -129924194 - MER5A DNA MER1_type -6 183 7 253 250 208 30 chr5 69706165 69706333 -129923817 + Tigger8 DNA MER2_type 46 243 -423 667 218 103 13 chr5 69706369 69706525 -129923625 - MER5A DNA MER1_type -1 188 19 26 30 0 0 chr5 69706625 69706658 -129923492 + AT_rich Low_complexity Low_complexity 1 33 0 271 219 57 65 chr5 69706660 69706783 -129923367 + Tigger8 DNA MER2_type 227 348 -318 316 288 30 15 chr5 69706846 69706978 -129923172 + Tigger8 DNA MER2_type 453 586 -80 218 138 0 69 chr5 69707810 69707868 -129922282 + (CCCCCG)n Simple_repeat Simple_repeat 6 59 0 262 294 0 37 chr5 69708552 69708715 -129921435 + G-rich Low_complexity Low_complexity 3 159 0 246 136 0 0 chr5 69710528 69710572 -129919578 + (TG)n Simple_repeat Simple_repeat 1 44 0 758 201 86 11 chr5 69712769 69712943 -129917207 + MIR SINE MIR 68 254 -8 488 278 56 25 chr5 69712955 69713117 -129917033 - MIR SINE MIR -19 243 77 1692 173 144 0 chr5 69713814 69714160 -129915990 + MSTD LTR MaLR 1 396 0 228 301 154 42 chr5 69715755 69715898 -129914252 + MIR SINE MIR 17 175 -87 256 278 0 0 chr5 69715899 69715971 -129914179 + (TA)n Simple_repeat Simple_repeat 1 72 0 414 0 0 0 chr5 69716025 69716071 -129914079 + (CAT)n Simple_repeat Simple_repeat 2 47 0 920 182 124 0 chr5 69720225 69720434 -129909716 + MER46A DNA MER2_type 2 236 0 369 296 182 29 chr5 69722971 69723278 -129906872 + L2 LINE L2 2920 3273 -40 26 30 0 0 chr5 69727988 69728021 -129902129 + AT_rich Low_complexity Low_complexity 1 33 0 2123 117 7 0 chr5 69728023 69728350 -129901800 + AluSx SINE Alu 1 329 0 254 270 32 71 chr5 69728755 69728775 -129901375 - MIR SINE MIR -24 238 219 2099 121 24 0 chr5 69728775 69729072 -129901078 - AluSx SINE Alu -8 304 1 254 270 32 71 chr5 69729072 69729143 -129901007 - MIR SINE MIR -43 219 150 2316 64 0 0 chr5 69729143 69729451 -129900699 - AluY SINE Alu 0 308 1 254 270 32 71 chr5 69729451 69729483 -129900667 - MIR SINE MIR -112 150 118 183 205 0 0 chr5 69732275 69732314 -129897836 + (TA)n Simple_repeat Simple_repeat 2 40 0 570 282 110 5 chr5 69732354 69732563 -129897587 - MIR SINE MIR -28 234 4 217 159 32 0 chr5 69732981 69733044 -129897106 + (TA)n Simple_repeat Simple_repeat 1 65 0 219 69 0 0 chr5 69733653 69733682 -129896468 + (TTCC)n Simple_repeat Simple_repeat 4 32 0 329 309 188 19 chr5 69734436 69734643 -129895507 - MIR SINE MIR -17 245 4 200 246 18 18 chr5 69736581 69736638 -129893512 + L2 LINE L2 3208 3264 -8 25 0 0 0 chr5 69737404 69737429 -129892721 + GC_rich Low_complexity Low_complexity 1 25 0 284 265 153 10 chr5 69738422 69738520 -129891630 + MIR3 SINE MIR 57 168 -40 21 0 0 0 chr5 69738548 69738569 -129891581 + AT_rich Low_complexity Low_complexity 1 21 0 383 342 33 11 chr5 69738626 69738810 -129891340 + L3b LINE CR1 1178 1365 -218 2159 110 7 3 chr5 69739205 69739505 -129890645 - AluSq SINE Alu -12 301 1 1355 38 0 0 chr5 69739514 69739674 -129890476 - AluY SINE Alu -10 301 142 224 77 26 0 chr5 69740214 69740253 -129889897 + (TTTC)n Simple_repeat Simple_repeat 1 40 0 1284 155 99 0 chr5 69740256 69740469 -129889681 - AluJb SINE Alu -78 234 1 892 171 0 0 chr5 69740469 69740615 -129889535 - AluJb SINE Alu -11 301 156 1864 136 49 7 chr5 69740887 69741173 -129888977 - AluSx SINE Alu -14 298 1 212 327 65 37 chr5 69742831 69742938 -129887212 - L2 LINE L2 -19 3294 3185 22 35 0 0 chr5 69744123 69744152 -129885998 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr5 69744299 69744328 -129885822 + AT_rich Low_complexity Low_complexity 1 29 0 226 269 0 0 chr5 69747240 69747292 -129882858 - L3b LINE CR1 0 1583 1532 2392 79 0 3 chr5 69749115 69749419 -129880731 - AluY SINE Alu -7 304 2 729 196 184 24 chr5 69751977 69752232 -129877918 + MER33 DNA MER1_type 5 300 -24 467 274 69 44 chr5 69752792 69752996 -129877154 + MIR SINE MIR 54 262 0 340 307 99 10 chr5 69753415 69753607 -129876543 + MIR SINE MIR 13 221 -41 371 289 28 35 chr5 69754138 69754280 -129875870 - MIR3 SINE MIR -9 199 59 337 246 0 64 chr5 69755269 69755379 -129874771 + L1MC4 LINE L1 6604 6706 -1336 329 222 22 33 chr5 69755329 69755419 -129874731 - L1MC4 LINE L1 -1339 6703 6615 * 453 286 3 0 chr5 69755420 69755750 -129874400 + (TA)n Simple_repeat Simple_repeat 1 331 0 579 260 0 0 chr5 69755761 69756058 -129874092 + (TA)n Simple_repeat Simple_repeat 1 297 0 332 315 0 0 chr5 69756067 69756159 -129873991 + L1MC4 LINE L1 6614 6705 -1337 * 355 250 23 0 chr5 69756113 69756201 -129873949 - L1MC4 LINE L1 -1339 6703 6614 582 281 124 14 chr5 69757350 69757567 -129872583 + MIR SINE MIR 10 250 -12 202 229 133 12 chr5 69757673 69757756 -129872394 + MIR3 SINE MIR 9 101 -107 462 148 10 59 chr5 69758053 69758154 -129871996 + MER5A DNA MER1_type 9 104 -85 853 235 29 33 chr5 69758399 69758671 -129871479 - MLT1A2 LTR MaLR -103 271 1 266 265 59 24 chr5 69758678 69758848 -129871302 + L1MC4 LINE L1 7867 8042 0 255 258 208 25 chr5 69759697 69759817 -129870333 + MIR SINE MIR 72 213 -49 585 288 95 21 chr5 69760980 69761223 -129868927 - MIR SINE MIR 0 262 2 25 31 0 0 chr5 69763854 69763886 -129866264 + AT_rich Low_complexity Low_complexity 1 32 0 376 252 39 10 chr5 69764062 69764165 -129865985 - MER5A DNA MER1_type -55 134 29 631 243 101 0 chr5 69764476 69764665 -129865485 - MER3 DNA MER1_type 0 209 2 2048 150 3 10 chr5 69764922 69765235 -129864915 + AluJb SINE Alu 1 311 -1 715 267 77 17 chr5 69765761 69766121 -129864029 - MER115 DNA AcHobo -3 690 237 182 250 71 0 chr5 69766511 69766567 -129863583 - L2 LINE L2 -3 3269 3210 244 325 0 0 chr5 69767382 69767459 -129862691 + CT-rich Low_complexity Low_complexity 2 78 0 694 189 91 7 chr5 69767499 69767642 -129862508 + MER63 DNA MER1_type 1 781 -55 21 0 0 0 chr5 69768470 69768491 -129861659 + AT_rich Low_complexity Low_complexity 1 21 0 199 303 0 15 chr5 69768550 69768616 -129861534 + L3b LINE CR1 1286 1350 -233 21 0 0 0 chr5 69768649 69768670 -129861480 + AT_rich Low_complexity Low_complexity 1 21 0 1091 178 13 44 chr5 69769140 69769365 -129860785 - MER20 DNA MER1_type 0 219 2 284 312 110 40 chr5 69769801 69769974 -129860176 - L2 LINE L2 -5 3267 3083 1122 171 101 92 chr5 69771550 69771617 -129858533 - MLT1B LTR MaLR 0 390 325 2136 103 0 24 chr5 69771617 69771909 -129858241 + AluSg SINE Alu 1 285 -25 1122 171 101 92 chr5 69771909 69772187 -129857963 - MLT1B LTR MaLR -65 325 42 277 262 66 16 chr5 69772260 69772382 -129857768 + MER20B DNA MER1_type 62 189 -594 188 310 76 38 chr5 69776633 69776791 -129853359 - MIR3 SINE MIR -42 166 3 389 270 30 10 chr5 69777400 69777500 -129852650 - MER91A DNA MER1_type -92 104 3 189 344 100 0 chr5 69777776 69777866 -129852284 - MIR SINE MIR -61 201 103 300 324 134 39 chr5 69780279 69780458 -129849692 + MIR3 SINE MIR 4 199 -9 183 129 0 0 chr5 69781443 69781474 -129848676 + (CCGAG)n Simple_repeat Simple_repeat 2 32 0 243 0 0 0 chr5 69782690 69782717 -129847433 + (A)n Simple_repeat Simple_repeat 1 27 0 414 161 54 0 chr5 69785868 69785961 -129844189 + L1MC1 LINE L1 6236 6333 0 1727 19 14 0 chr5 69787677 69787885 -129842265 + L1PA2 LINE L1 5945 6155 0 434 272 38 67 chr5 69790001 69790214 -129839936 - MIR SINE MIR -6 256 51 975 154 0 0 chr5 69794245 69794414 -129835736 + (TA)n Simple_repeat Simple_repeat 1 169 0 2407 44 0 20 chr5 69794924 69795217 -129834933 - AluY SINE Alu -24 287 1 414 263 74 65 chr5 69795802 69796019 -129834131 + LTR33A LTR ERVL 225 443 -80 388 264 138 12 chr5 69796121 69796288 -129833862 - MIR SINE MIR -74 188 1 871 184 78 34 chr5 69796453 69796632 -129833518 + MER5A DNA MER1_type 1 187 -2 306 313 91 45 chr5 69796743 69796919 -129833231 + MIR3 SINE MIR 16 199 -9 292 326 170 37 chr5 69798076 69798294 -129831856 - L2 LINE L2 -4 3268 3022 252 155 0 69 chr5 69798674 69798732 -129831418 + MER5B DNA MER1_type 7 60 -118 195 268 61 37 chr5 69798751 69798833 -129831317 + MIR SINE MIR 177 260 -2 22 35 0 0 chr5 69798950 69798979 -129831171 + AT_rich Low_complexity Low_complexity 1 29 0 1210 173 25 69 chr5 69800322 69800640 -129829510 + MER63 DNA MER1_type 755 1058 -4 29 28 0 0 chr5 69800942 69800978 -129829172 + AT_rich Low_complexity Low_complexity 1 36 0 232 274 66 46 chr5 69801317 69801576 -129828574 + L1MEd LINE L1 942 1205 -4914 766 143 0 57 chr5 69801727 69801867 -129828283 + FLAM_A SINE Alu 1 132 -1 270 0 0 0 chr5 69802797 69802827 -129827323 + (TG)n Simple_repeat Simple_repeat 2 31 0 504 320 197 5 chr5 69803522 69803725 -129826425 - MIR SINE MIR -19 243 2 404 292 57 81 chr5 69804023 69804397 -129825753 - MLT1J LTR MaLR -25 590 110 230 264 38 0 chr5 69805336 69805389 -129824761 + MLT1F LTR MaLR 12 66 -476 1293 227 30 7 chr5 69805427 69805722 -129824428 + MLT1F LTR MaLR 199 500 -42 317 355 5 73 chr5 69805725 69805945 -129824205 - MIR3 SINE MIR -40 168 2 283 325 135 0 chr5 69806762 69806888 -129823262 - MIR3 SINE MIR -9 199 57 2513 150 31 13 chr5 69807053 69807500 -129822650 + LTR32 LTR ERVL 13 467 -4 430 227 174 8 chr5 69807549 69807681 -129822469 + MIR SINE MIR 105 258 -4 621 236 74 14 chr5 69807779 69807927 -129822223 - MER5A DNA MER1_type 0 189 33 2244 121 7 0 chr5 69807971 69808268 -129821882 - AluSq SINE Alu -14 299 1 182 204 0 20 chr5 69809214 69809263 -129820887 + GA-rich Low_complexity Low_complexity 4 51 0 21 0 0 0 chr5 69809263 69809284 -129820866 + AT_rich Low_complexity Low_complexity 1 21 0 2315 153 23 67 chr5 69809356 69809656 -129820494 + LTR32 LTR ERVL 15 288 -183 1695 182 17 17 chr5 69809656 69809947 -129820203 - AluJo SINE Alu -21 291 1 2315 153 23 67 chr5 69809947 69810122 -129820028 + LTR32 LTR ERVL 288 469 -2 468 167 377 7 chr5 69810422 69810560 -129819590 + MER5A DNA MER1_type 1 189 0 286 289 176 6 chr5 69810607 69810766 -129819384 - MER5A DNA MER1_type 0 189 4 184 316 0 18 chr5 69810830 69810887 -129819263 - MER5A DNA MER1_type -96 93 38 526 241 124 33 chr5 69811241 69811515 -129818635 + LTR37A LTR ERV1 102 400 -26 1422 229 90 14 chr5 69811563 69811986 -129818164 + MLT1D LTR MaLR 1 455 -50 202 275 43 14 chr5 69812363 69812432 -129817718 - MIR SINE MIR -106 156 86 1536 201 77 0 chr5 69812683 69813022 -129817128 - MLT1A1 LTR MaLR 0 365 1 306 0 0 0 chr5 69813969 69814003 -129816147 + (TC)n Simple_repeat Simple_repeat 1 34 0 297 0 0 0 chr5 69814002 69814035 -129816115 + (CA)n Simple_repeat Simple_repeat 1 33 0 * 354 172 30 10 chr5 69814190 69814289 -129815861 + CT-rich Low_complexity Low_complexity 1 101 0 1961 137 7 17 chr5 69814290 69814590 -129815560 - AluJo SINE Alu -15 297 1 246 146 0 0 chr5 69814610 69814658 -129815492 - HAL1 LINE L1 0 2507 2460 624 274 4 72 chr5 69814659 69814896 -129815254 - MIR SINE MIR -1 261 41 930 220 6 12 chr5 69814901 69815074 -129815076 + FAM SINE Alu 4 175 0 201 74 0 0 chr5 69815136 69815163 -129814987 + (CA)n Simple_repeat Simple_repeat 1 27 0 817 192 108 181 chr5 69815164 69815670 -129814480 - HAL1 LINE L1 -100 2407 1872 618 167 10 0 chr5 69815670 69815772 -129814378 - AluJb SINE Alu -19 293 191 817 192 108 181 chr5 69815772 69815973 -129814177 - HAL1 LINE L1 -635 1872 1658 7625 47 13 9 chr5 69815993 69817490 -129812660 - SVA Other Other -839 1386 1 312 295 74 102 chr5 69817490 69817775 -129812375 - HAL1 LINE L1 -2087 420 144 336 179 0 0 chr5 69818237 69818315 -129811835 + GA-rich Low_complexity Low_complexity 1 78 0 845 184 0 11 chr5 69818328 69818507 -129811643 + GA-rich Low_complexity Low_complexity 2 178 0 234 0 0 0 chr5 69818725 69818751 -129811399 + (A)n Simple_repeat Simple_repeat 1 26 0 2112 143 0 0 chr5 69818804 69819105 -129811045 + AluSx SINE Alu 2 302 -10 889 184 56 15 chr5 69819229 69819425 -129810725 - MIR SINE MIR 0 262 59 478 252 45 26 chr5 69819884 69820039 -129810111 + MIR SINE MIR 105 262 0 461 264 135 6 chr5 69821203 69821366 -129808784 - MIR SINE MIR -18 244 61 199 219 0 0 chr5 69821400 69821441 -129808709 + L2 LINE L2 3264 3304 -9 4785 107 2 5 chr5 69821443 69822081 -129808069 + L1PA13 LINE L1 5526 6161 -2 353 312 39 13 chr5 69823038 69823192 -129806958 + MARNA DNA Mariner 42 199 -387 401 298 178 0 chr5 69823312 69823537 -129806613 + MARNA DNA Mariner 199 463 -123 258 32 0 0 chr5 69823594 69823625 -129806525 + (CA)n Simple_repeat Simple_repeat 2 32 0 2070 199 29 63 chr5 69824142 69824665 -129805485 + MLT1D LTR MaLR 1 505 0 1085 190 46 0 chr5 69824749 69824965 -129805185 + L1MB4 LINE L1 5954 6179 -1 207 250 0 0 chr5 69825042 69825086 -129805064 - MER5A DNA MER1_type -133 56 13 258 270 0 0 chr5 69825728 69825791 -129804359 + L3 LINE CR1 1328 1390 -187 524 140 0 21 chr5 69825802 69825895 -129804255 - MIR SINE MIR -96 166 76 514 307 0 7 chr5 69825951 69826104 -129804046 - LTR16C LTR ERVL 0 491 340 1713 144 3 63 chr5 69827492 69827811 -129802339 - AluJb SINE Alu -12 300 1 836 258 45 56 chr5 69828173 69828510 -129801640 - MLT1K LTR MaLR -3 585 253 451 320 77 43 chr5 69828530 69828830 -129801320 - MLT1I LTR MaLR 0 409 100 301 292 62 28 chr5 69828872 69829016 -129801134 - MLT1K LTR MaLR -333 255 107 2091 191 57 65 chr5 69829414 69829923 -129800227 + MLT1D LTR MaLR 1 505 0 379 229 166 63 chr5 69831203 69831378 -129798772 - MIR SINE MIR -6 256 64 364 274 139 51 chr5 69831942 69832162 -129797988 - MIR SINE MIR -20 242 5 29 0 0 0 chr5 69832183 69832212 -129797938 + AT_rich Low_complexity Low_complexity 1 29 0 556 253 129 21 chr5 69832787 69833020 -129797130 + MIR SINE MIR 3 260 -2 233 286 17 59 chr5 69833218 69833337 -129796813 + MER5A DNA MER1_type 7 120 -69 2363 99 0 0 chr5 69833598 69833902 -129796248 - AluSg SINE Alu -6 304 1 1353 152 107 18 chr5 69833942 69834369 -129795781 + LTR54 LTR ERV1 1 510 0 230 317 19 56 chr5 69834953 69835114 -129795036 + MIR SINE MIR 57 211 -51 531 251 19 21 chr5 69835147 69835313 -129794837 + MER34 LTR ERV1 1 243 -411 383 261 107 79 chr5 69835363 69835616 -129794534 + LTR48B LTR ERV1 385 644 0 357 229 246 6 chr5 69837009 69837152 -129792998 + MER5A DNA MER1_type 4 187 -2 180 316 0 0 chr5 69838395 69838433 -129791717 - L2 LINE L2 -85 3228 3191 199 104 0 42 chr5 69838907 69838936 -129791214 + (TTTTC)n Simple_repeat Simple_repeat 4 32 -17 3360 148 42 15 chr5 69838936 69839531 -129790619 - L1MC2 LINE L1 0 6344 5734 199 104 0 42 chr5 69839531 69839549 -129790601 + (TTTTC)n Simple_repeat Simple_repeat 32 49 0 24 67 0 0 chr5 69840066 69840111 -129790039 + AT_rich Low_complexity Low_complexity 1 45 0 2393 174 62 2 chr5 69840424 69840826 -129789324 + MSTB LTR MaLR 1 426 0 9085 170 40 22 chr5 69840826 69842448 -129787702 + MSTB-int LTR MaLR 1 1651 0 2357 179 49 5 chr5 69842448 69842856 -129787294 + MSTB LTR MaLR 1 426 0 2586 151 38 14 chr5 69843122 69843540 -129786610 - MSTA LTR MaLR 0 428 1 2206 95 0 0 chr5 69843651 69843969 -129786181 - AluSx SINE Alu 0 318 1 264 260 13 13 chr5 69844829 69844906 -129785244 + MLT1K LTR MaLR 511 587 -1 309 232 52 9 chr5 69846793 69846903 -129783247 + MIR SINE MIR 94 208 -39 435 220 203 42 chr5 69846955 69847125 -129783025 + MIR SINE MIR 21 213 -49 210 238 16 48 chr5 69847777 69847840 -129782310 + MIR3 SINE MIR 103 163 -45 1686 112 131 51 chr5 69848450 69848764 -129781386 - MER44D DNA MER2_type 0 609 1 924 195 5 49 chr5 69848921 69849031 -129781119 + MER45A DNA AcHobo 2 102 -1479 2191 121 0 0 chr5 69849031 69849328 -129780822 - AluSx SINE Alu -15 297 1 924 195 5 49 chr5 69849328 69849402 -129780748 + MER45A DNA AcHobo 102 178 0 309 283 65 45 chr5 69851480 69851727 -129778423 - L1ME LINE L1 -274 5847 5596 1867 47 0 0 chr5 69852079 69852293 -129777857 - L1PA7 LINE L1 -3 6151 5938 308 294 65 71 chr5 69852625 69852809 -129777341 + L1ME LINE L1 863 1045 -5886 256 276 94 8 chr5 69853420 69853547 -129776603 + L1ME LINE L1 1316 1453 -4970 333 0 0 0 chr5 69853675 69853712 -129776438 + (GA)n Simple_repeat Simple_repeat 2 38 0 1970 253 133 36 chr5 69853780 69855205 -129774945 + L1ME LINE L1 2256 3865 -3076 813 263 143 52 chr5 69855205 69855707 -129774443 - MLT1H LTR MaLR -1 548 1 1970 253 133 36 chr5 69855707 69856165 -129773985 + L1ME LINE L1 3865 4277 -2664 1076 136 13 0 chr5 69856170 69856347 -129773803 - AluSg/x SINE Alu 0 307 129 997 279 112 24 chr5 69856347 69856810 -129773340 + L1ME LINE L1 4315 4818 -2123 656 197 0 0 chr5 69856813 69856935 -129773215 + L1MA5 LINE L1 6027 6148 -152 890 140 7 37 chr5 69856945 69857081 -129773069 - FLAM_C SINE Alu 0 133 2 1252 238 56 75 chr5 69857083 69857601 -129772549 + L1ME LINE L1 5362 5869 -1072 355 269 176 0 chr5 69858910 69859018 -129771132 + MER5A DNA MER1_type 63 189 0 473 317 21 16 chr5 69859038 69859224 -129770926 - Charlie8 DNA MER1_type -2164 253 67 2273 115 0 0 chr5 69859227 69859531 -129770619 + AluSg SINE Alu 1 304 -6 817 303 25 8 chr5 69859596 69859837 -129770313 + MIR SINE MIR 6 250 -12 367 333 7 27 chr5 69860676 69860826 -129769324 - MER117 DNA MER1_type 0 197 51 252 321 61 93 chr5 69861614 69861860 -129768290 - L2 LINE L2 -40 3232 2995 213 39 0 0 chr5 69862054 69862080 -129768070 + (T)n Simple_repeat Simple_repeat 1 26 0 3208 165 24 44 chr5 69862374 69863005 -129767145 - L1MB2 LINE L1 -8 6163 5546 227 333 121 15 chr5 69864436 69864568 -129765582 + MIR3 SINE MIR 57 202 -6 273 276 0 58 chr5 69865288 69865375 -129764775 + MIR SINE MIR 46 127 -135 180 0 0 0 chr5 69865376 69865396 -129764754 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1922 127 0 0 chr5 69865408 69865667 -129764483 - AluSq SINE Alu -49 264 6 260 239 80 98 chr5 69865695 69865850 -129764300 + MLT1D LTR MaLR 7 158 -347 3492 128 40 28 chr5 69865850 69866457 -129763693 - LTR38B LTR ERV1 0 611 1 1203 164 73 129 chr5 69866457 69866600 -129763550 + MLT1D LTR MaLR 156 306 -199 2075 135 0 49 chr5 69866600 69866926 -129763224 + AluSx SINE Alu 1 310 -2 1203 164 73 129 chr5 69866926 69867153 -129762997 + MLT1D LTR MaLR 306 505 0 25 31 0 0 chr5 69869346 69869378 -129760772 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 69870313 69870336 -129759814 + AT_rich Low_complexity Low_complexity 1 23 0 253 264 14 28 chr5 69870624 69870696 -129759454 - MIR3 SINE MIR -28 180 110 243 0 0 0 chr5 69871141 69871168 -129758982 + (T)n Simple_repeat Simple_repeat 1 27 0 322 263 53 0 chr5 69871376 69871452 -129758698 + MER5A DNA MER1_type 104 183 -6 * 635 204 30 0 chr5 69871441 69871573 -129758577 - MER5B DNA MER1_type -42 136 1 341 216 0 0 chr5 69871800 69871874 -129758276 + MIR SINE MIR 181 254 -8 1975 134 3 16 chr5 69871880 69872186 -129757964 + AluSx SINE Alu 1 302 -10 473 270 54 0 chr5 69872258 69872406 -129757744 - MIR SINE MIR -23 239 84 469 190 35 63 chr5 69873274 69873416 -129756734 - L2 LINE L2 0 3313 3176 1959 142 52 6 chr5 69873642 69873967 -129756183 + MER2 DNA MER2_type 1 340 -5 301 240 39 39 chr5 69874166 69874270 -129755880 + L3b LINE CR1 1241 1344 -239 195 338 0 0 chr5 69875642 69875713 -129754437 - MIR3 SINE MIR -3 205 135 199 321 9 71 chr5 69876163 69876275 -129753875 + MIR SINE MIR 17 121 -87 251 211 86 120 chr5 69876330 69876505 -129753645 - Charlie8 DNA MER1_type -2235 182 14 321 268 325 2 chr5 69877026 69877204 -129752946 - MIR SINE MIR 0 262 30 347 241 97 111 chr5 69878924 69879140 -129751010 - MER102b DNA MER1_type -19 322 110 1570 166 172 56 chr5 69879140 69879495 -129750655 + MSTD LTR MaLR 1 396 0 593 241 28 28 chr5 69879632 69879773 -129750377 - MIR3 SINE MIR -65 143 3 579 287 87 27 chr5 69881102 69881471 -129748679 + L1MCc LINE L1 32 422 -6001 2719 223 40 24 chr5 69881662 69882455 -129747695 + L1M4 LINE L1 2381 3186 -2960 218 161 0 18 chr5 69883622 69883678 -129746472 + (TG)n Simple_repeat Simple_repeat 2 56 0 528 292 56 0 chr5 69884419 69884563 -129745587 - L2 LINE L2 -4 3268 3117 426 204 48 10 chr5 69884760 69884863 -129745287 + MER103 DNA DNA 10 116 -50 2439 109 125 10 chr5 69884888 69885272 -129744878 - MSTA LTR MaLR 0 428 1 458 143 0 12 chr5 69885855 69885939 -129744211 + MER53 DNA DNA 100 182 -7 * 531 167 0 0 chr5 69885865 69885955 -129744195 - MER53 DNA DNA -99 90 1 968 160 139 26 chr5 69886257 69886451 -129743699 + MER20 DNA MER1_type 1 216 -3 527 277 58 54 chr5 69886937 69887215 -129742935 + MLT1J LTR MaLR 231 509 -2 375 284 6 49 chr5 69888026 69888117 -129742033 + MIR SINE MIR 73 156 -106 2291 172 12 8 chr5 69888117 69888518 -129741632 + MER57A LTR ERV1 1 403 0 375 284 6 49 chr5 69888518 69888588 -129741562 + MIR SINE MIR 156 227 -35 1381 233 76 49 chr5 69890239 69890686 -129739464 + MLT1C LTR MaLR 6 464 -3 1720 221 40 62 chr5 69890806 69891004 -129739146 + MLT1D LTR MaLR 6 207 -298 1877 180 28 26 chr5 69891004 69891393 -129738757 + L1MB8 LINE L1 5789 6178 0 1720 221 40 62 chr5 69891393 69891588 -129738562 + MLT1D LTR MaLR 207 388 -117 2344 119 71 6 chr5 69891588 69891940 -129738210 + THE1C LTR MaLR 1 375 0 1720 221 40 62 chr5 69891940 69892048 -129738102 + MLT1D LTR MaLR 388 497 -8 1224 138 66 117 chr5 69892190 69892523 -129737627 - MER33 DNA MER1_type -4 320 5 398 294 169 35 chr5 69892546 69892948 -129737202 + L1MC4a LINE L1 5499 5954 -1854 218 188 38 12 chr5 69893081 69893096 -129737054 + (TA)n Simple_repeat Simple_repeat 2 15 -68 2358 155 101 0 chr5 69893096 69893483 -129736667 + MSTB LTR MaLR 1 426 0 218 188 38 12 chr5 69893483 69893547 -129736603 + (TA)n Simple_repeat Simple_repeat 15 83 0 2588 166 26 5 chr5 69894090 69894507 -129735643 - MSTB LTR MaLR 0 426 1 1960 140 50 39 chr5 69894507 69894871 -129735279 - THE1C LTR MaLR -7 368 1 2141 103 0 7 chr5 69895349 69895652 -129734498 + AluSg SINE Alu 1 301 0 2464 195 144 10 chr5 69895955 69896477 -129733673 + MLT1G1 LTR MaLR 1 592 -3 205 358 91 17 chr5 69896482 69896658 -129733492 - L3 LINE CR1 -697 880 692 612 269 117 45 chr5 69896682 69897000 -129733150 + L1ME4a LINE L1 5518 5887 -234 1716 215 21 9 chr5 69897000 69897339 -129732811 + MER2 DNA MER2_type 2 344 0 612 269 117 45 chr5 69897339 69897525 -129732625 + L1ME4a LINE L1 5887 6058 -63 1659 151 60 32 chr5 69897581 69897866 -129732284 - AluJb SINE Alu -19 293 1 1525 261 58 47 chr5 69897941 69898455 -129731695 - MLT2B1 LTR ERVL 0 520 1 297 352 7 14 chr5 69898940 69899085 -129731065 - L3 LINE CR1 -904 673 530 659 236 118 38 chr5 69899167 69899328 -129730822 - MER112 DNA MER1_type 0 256 69 252 0 0 0 chr5 69899328 69899356 -129730794 + (TG)n Simple_repeat Simple_repeat 2 29 0 659 236 118 38 chr5 69899356 69899431 -129730719 - MER112 DNA MER1_type -187 69 1 5307 198 68 74 chr5 69899486 69900748 -129729402 + MER45R DNA AcHobo 1 1255 -326 2470 116 16 24 chr5 69900748 69901126 -129729024 - THE1C LTR MaLR 0 375 1 5307 198 68 74 chr5 69901126 69901366 -129728784 + MER45R DNA AcHobo 1255 1495 -86 1045 180 0 0 chr5 69901405 69901577 -129728573 - FRAM SINE Alu -6 170 1 448 185 62 0 chr5 69901577 69901658 -129728492 + MER45 DNA AcHobo 1496 1581 0 250 242 53 21 chr5 69902671 69902766 -129727384 + MER45R DNA AcHobo 1247 1344 -237 377 298 23 30 chr5 69902884 69903015 -129727135 + MIR SINE MIR 2 131 -131 32 14 0 68 chr5 69903599 69903610 -129726540 + AT_rich Low_complexity Low_complexity 1 11 -57 5588 124 53 18 chr5 69903610 69904466 -129725684 - L1MC1 LINE L1 0 6333 5448 32 14 0 68 chr5 69904466 69904527 -129725623 + AT_rich Low_complexity Low_complexity 11 68 0 2424 74 0 3 chr5 69905229 69905527 -129724623 - AluY SINE Alu -14 297 1 462 270 143 92 chr5 69905681 69906263 -129723887 + L2 LINE L2 2708 3310 -3 1505 243 115 7 chr5 69907343 69907788 -129722362 + MLT1H LTR MaLR 17 509 -40 225 0 0 0 chr5 69910643 69910668 -129719482 + (T)n Simple_repeat Simple_repeat 1 25 0 22 0 0 0 chr5 69911602 69911624 -129718526 + AT_rich Low_complexity Low_complexity 1 22 0 1094 216 112 81 chr5 69911624 69912106 -129718044 + MLT1J LTR MaLR 1 497 -14 898 191 58 17 chr5 69912170 69912343 -129717807 - AluJo SINE Alu -40 272 93 212 360 27 45 chr5 69914070 69914181 -129715969 - L2 LINE L2 -37 3235 3127 1583 172 93 71 chr5 69914363 69914741 -129715409 + MLT1B LTR MaLR 1 386 -4 1476 166 95 73 chr5 69914375 69914743 -129715407 + MLT1B LTR MaLR 13 388 -2 234 195 0 0 chr5 69915102 69915143 -129715007 + MER5B DNA MER1_type 2 42 -136 1439 196 139 36 chr5 69915160 69915599 -129714551 + MLT1D LTR MaLR 22 505 0 289 281 148 44 chr5 69915977 69916496 -129713654 - L2 LINE L2 -1004 2310 1738 421 312 64 18 chr5 69916509 69916727 -129713423 + MIR SINE MIR 10 237 -25 693 153 69 69 chr5 69916809 69916929 -129713221 - MER53 DNA DNA 0 189 67 2135 199 20 32 chr5 69916929 69917436 -129712714 - MLT1D LTR MaLR 0 505 5 693 153 69 69 chr5 69917436 69917504 -129712646 - MER53 DNA DNA -121 68 1 28 0 0 0 chr5 69917654 69917682 -129712468 + AT_rich Low_complexity Low_complexity 1 28 0 1219 208 0 5 chr5 69917684 69917905 -129712245 - AluJo SINE Alu -92 220 1 366 170 8 26 chr5 69918035 69918121 -129712029 - LTR33A LTR ERVL -22 528 437 1809 171 0 7 chr5 69918664 69918957 -129711193 + AluJb SINE Alu 1 291 -21 787 226 54 27 chr5 69919164 69919385 -129710765 - MLT1H1 LTR MaLR -7 548 322 267 253 21 11 chr5 69919509 69919604 -129710546 - Charlie7 DNA MER1_type -2464 148 53 1657 164 29 35 chr5 69919887 69920199 -129709951 - AluJo SINE Alu -2 310 1 221 171 0 0 chr5 69920427 69920468 -129709682 + L2 LINE L2 3261 3301 -12 2256 119 0 0 chr5 69920607 69920902 -129709248 - AluSx SINE Alu -17 295 1 295 315 35 34 chr5 69922560 69922705 -129707445 - MIR SINE MIR -62 146 32 1570 131 30 0 chr5 69923702 69923938 -129706212 + AluSp SINE Alu 62 304 -9 329 289 18 9 chr5 69924537 69924651 -129705499 + MIR SINE MIR 109 223 -39 2508 192 83 23 chr5 69925026 69925625 -129704525 - L1MB1 LINE L1 -2 6166 5532 417 241 37 19 chr5 69926411 69926519 -129703631 + MIR SINE MIR 64 173 -89 294 260 252 0 chr5 69927609 69927736 -129702414 + MER91A DNA MER1_type 1 159 -37 241 286 29 0 chr5 69927736 69927806 -129702344 + MER91A DNA MER1_type 125 196 0 554 299 39 20 chr5 69927812 69927895 -129702255 - MIR SINE MIR -20 242 162 2144 90 0 4 chr5 69927895 69928163 -129701987 - AluSc SINE Alu -17 292 26 554 299 39 20 chr5 69928163 69928283 -129701867 - MIR SINE MIR -100 162 35 252 0 0 0 chr5 69930045 69930073 -129700077 + (TG)n Simple_repeat Simple_repeat 2 29 0 192 231 39 0 chr5 69930433 69930485 -129699665 + MIR SINE MIR 85 138 -124 649 245 72 30 chr5 69930910 69931147 -129699003 + MIR SINE MIR 14 260 -2 475 248 55 14 chr5 69931298 69931443 -129698707 - MER103 DNA DNA -2 164 14 289 293 121 14 chr5 69931623 69931763 -129698387 + MER5A DNA MER1_type 35 189 0 396 250 92 17 chr5 69932290 69932410 -129697740 + LTR68 LTR ERV1 278 406 -334 1912 221 46 68 chr5 69932916 69933582 -129696568 - LTR8A LTR ERV1 0 727 100 465 317 10 129 chr5 69936147 69936338 -129693812 + L2 LINE L2 2931 3057 -215 1925 97 0 4 chr5 69936338 69936607 -129693543 + AluY SINE Alu 38 305 0 465 317 10 129 chr5 69936607 69936801 -129693349 + L2 LINE L2 3057 3272 0 570 293 33 0 chr5 69936834 69937015 -129693135 + MIR SINE MIR 76 262 0 290 171 0 86 chr5 69938307 69938377 -129691773 - MIR SINE MIR -85 177 114 345 261 65 43 chr5 69939208 69939346 -129690804 - MER5A DNA MER1_type -6 183 43 278 229 39 88 chr5 69939444 69939626 -129690524 + MER5B DNA MER1_type 4 188 -1 266 180 16 0 chr5 69941656 69941717 -129688433 + CT-rich Low_complexity Low_complexity 2 63 0 189 271 14 57 chr5 69943106 69943176 -129686974 - MIR SINE MIR -137 125 59 1926 117 25 11 chr5 69943765 69944039 -129686111 + AluSq SINE Alu 1 278 -35 687 192 53 148 chr5 69944564 69944902 -129685248 - LTR8A-int LTR ERV1 -220 4716 4411 361 180 120 30 chr5 69944940 69945040 -129685110 - LTR37A LTR ERV1 -317 109 1 5815 184 29 57 chr5 69945041 69946402 -129683748 - LTR8A-int LTR ERV1 -687 4249 2927 1031 193 96 48 chr5 69946588 69946629 -129683521 - MSTD LTR MaLR 0 396 358 2811 192 29 76 chr5 69946629 69947354 -129682796 - LTR8 LTR ERV1 0 691 1 1031 193 96 48 chr5 69947354 69947649 -129682501 - MSTD LTR MaLR -38 358 1 1079 276 60 62 chr5 69948019 69948570 -129681580 - LTR48-int LTR ERV1 -5170 1161 612 438 279 7 21 chr5 69948679 69948819 -129681331 - LTR48-int LTR ERV1 -6157 644 507 489 269 55 40 chr5 69948905 69949106 -129681044 - LTR48-int LTR ERV1 -6127 204 1 265 191 90 28 chr5 69949112 69949277 -129680873 - LTR48 LTR ERV1 -5 732 449 1121 133 0 6 chr5 69950300 69950458 -129679692 + AluJb SINE Alu 134 290 -22 1046 134 43 18 chr5 69950737 69950901 -129679249 - MER20 DNA MER1_type -46 173 6 * 1349 190 71 86 chr5 69950891 69951355 -129678795 - MER110A LTR ERV1 -11 457 1 392 314 87 16 chr5 69951496 69951681 -129678469 + MIR SINE MIR 48 245 -17 271 288 179 33 chr5 69952207 69952391 -129677759 - MIR SINE MIR -33 229 19 425 268 32 8 chr5 69953092 69953215 -129676935 + MIR3 SINE MIR 60 185 -23 715 214 97 15 chr5 69954007 69954274 -129675876 - L1ME4a LINE L1 -3 6118 5830 334 236 74 79 chr5 69954274 69954490 -129675660 - L1MC4 LINE L1 -293 7749 7535 401 247 86 0 chr5 69954747 69954840 -129675310 - L2 LINE L2 -38 3234 3134 571 296 123 61 chr5 69955031 69955292 -129674858 - L2 LINE L2 -338 2976 2732 2242 115 48 25 chr5 69955292 69955648 -129674502 - THE1B LTR MaLR 0 364 1 571 296 123 61 chr5 69955648 69955875 -129674275 - L2 LINE L2 -582 2732 2458 1127 292 65 16 chr5 69955875 69956358 -129673792 - MLT1K LTR MaLR 0 588 10 509 306 190 42 chr5 69956366 69957375 -129672775 - L2 LINE L2 -842 2472 1314 278 253 150 48 chr5 69957957 69958110 -129672040 + MIR3 SINE MIR 13 178 -84 694 299 66 54 chr5 69958601 69958807 -129671343 + L2 LINE L2 2379 2592 -722 1604 186 29 29 chr5 69958807 69959114 -129671036 - AluJo SINE Alu -5 307 1 694 299 66 54 chr5 69959114 69959242 -129670908 + L2 LINE L2 2592 2717 -597 365 332 55 18 chr5 69959259 69959476 -129670674 + L2 LINE L2 2845 3069 -244 282 250 0 0 chr5 69959697 69959785 -129670365 + CT-rich Low_complexity Low_complexity 3 90 0 930 272 155 21 chr5 69960015 69960390 -129669760 - MLT1H LTR MaLR 0 549 125 226 349 79 40 chr5 69960721 69960847 -129669303 + L2 LINE L2 3123 3253 -19 2028 124 3 3 chr5 69961123 69961455 -129668695 + AluSc SINE Alu 3 334 0 1980 148 7 3 chr5 69961738 69962036 -129668114 + AluJb SINE Alu 1 299 -13 1677 158 23 116 chr5 69962413 69962843 -129667307 + MLT1B LTR MaLR 1 390 0 334 304 0 26 chr5 69963878 69963993 -129666157 - MIR SINE MIR -28 234 123 200 333 0 15 chr5 69964482 69964548 -129665602 + MIR SINE MIR 83 147 -61 812 230 72 19 chr5 69965467 69965676 -129664474 - MIR SINE MIR 0 262 43 509 265 22 15 chr5 69966211 69966347 -129663803 - MIR SINE MIR -53 209 73 1979 110 62 7 chr5 69966668 69966960 -129663190 - AluSg SINE Alu -2 308 1 180 111 0 0 chr5 69967542 69967569 -129662581 + (TG)n Simple_repeat Simple_repeat 2 28 0 460 229 8 25 chr5 69967960 69968078 -129662072 - MIR3 SINE MIR -6 202 87 2212 89 4 0 chr5 69968995 69969299 -129660851 + AluSc SINE Alu 1 305 0 315 221 132 68 chr5 69969302 69969537 -129660613 + L1MC5 LINE L1 7660 7909 -52 418 328 30 8 chr5 69970436 69970567 -129659583 - L2 LINE L2 -1 3271 3138 1278 175 74 12 chr5 69970607 69970864 -129659286 + ORSL DNA AcHobo 3 275 0 920 220 60 26 chr5 69971088 69971320 -129658830 - MIR SINE MIR 0 262 23 466 250 71 0 chr5 69973655 69973767 -129656383 + MIR SINE MIR 13 132 -130 222 350 200 0 chr5 69974703 69974823 -129655327 - MIR3 SINE MIR -35 173 30 253 333 26 26 chr5 69974852 69974966 -129655184 - L2 LINE L2 -79 3193 3080 427 221 126 0 chr5 69974970 69975097 -129655053 - MIR SINE MIR -10 252 110 260 288 25 0 chr5 69976522 69976602 -129653548 + MER91A DNA MER1_type 1 82 -114 439 264 47 47 chr5 69976605 69976734 -129653416 + L2 LINE L2 3185 3313 0 562 225 106 92 chr5 69977036 69977447 -129652703 + MLT1J LTR MaLR 165 511 0 6592 203 57 10 chr5 69979370 69981708 -129648442 - L1MA9 LINE L1 -7 6305 3849 22 0 0 0 chr5 69981885 69981907 -129648243 + AT_rich Low_complexity Low_complexity 1 22 0 448 314 151 0 chr5 69981934 69982106 -129648044 - MIR SINE MIR -16 246 49 287 309 24 73 chr5 69984086 69984251 -129645899 + MIR SINE MIR 8 164 -98 800 307 97 21 chr5 69984280 69984661 -129645489 + MLT1J2 LTR MaLR 33 442 -8 406 163 0 65 chr5 69984705 69984797 -129645353 + MIR SINE MIR 167 252 -10 216 97 0 0 chr5 69985280 69985311 -129644839 + (CACCAT)n Simple_repeat Simple_repeat 2 32 0 34 42 0 0 chr5 69985896 69985944 -129644206 + AT_rich Low_complexity Low_complexity 1 48 0 3749 122 6 79 chr5 69986579 69987236 -129642914 + MER4B LTR ERV1 1 609 -1 1424 219 86 0 chr5 69987684 69987976 -129642174 + MLT1E LTR MaLR 277 593 0 468 294 124 36 chr5 69988394 69988860 -129641290 + L2 LINE L2 2757 3296 -17 359 204 32 21 chr5 69989456 69989549 -129640601 + MER5B DNA MER1_type 85 178 0 608 263 101 44 chr5 69989616 69989716 -129640434 + MIR SINE MIR 1 94 -168 2415 137 19 19 chr5 69989716 69990080 -129640070 + THE1B LTR MaLR 1 364 0 12881 87 1 2 chr5 69990080 69991661 -129638489 + THE1B-int LTR MaLR 1 1580 0 2579 107 19 25 chr5 69991661 69992027 -129638123 + THE1B LTR MaLR 1 364 0 608 263 101 44 chr5 69992027 69992152 -129637998 + MIR SINE MIR 93 241 -21 1905 147 10 25 chr5 69992425 69992739 -129637411 + AluSx SINE Alu 1 309 -3 331 229 45 83 chr5 69993244 69993401 -129636749 + HAL1b LINE L1 1191 1341 -7 2104 135 29 40 chr5 69994262 69994335 -129635815 - MER2 DNA MER2_type 0 344 272 1927 133 0 7 chr5 69994335 69994613 -129635537 + AluSx SINE Alu 25 300 -12 2104 135 29 40 chr5 69994613 69994887 -129635263 - MER2 DNA MER2_type -72 272 1 1230 278 95 14 chr5 69995548 69996030 -129634120 - LTR33 LTR ERVL 0 521 1 389 337 66 28 chr5 69997532 69997713 -129632437 + MER5A DNA MER1_type 2 189 0 599 159 76 42 chr5 69997967 69998124 -129632026 - MLT1H1 LTR MaLR -410 145 1 180 0 0 0 chr5 69998610 69998630 -129631520 + (TC)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr5 69998663 69998683 -129631467 + (T)n Simple_repeat Simple_repeat 1 20 0 199 314 0 0 chr5 69999595 69999646 -129630504 + L2 LINE L2 3252 3302 -11 288 184 0 0 chr5 69999782 69999831 -129630319 - L2 LINE L2 -3 3310 3262 211 263 35 0 chr5 69999911 69999968 -129630182 + L2 LINE L2 3253 3311 -2 408 20 0 0 chr5 70000604 70000653 -129629497 + (CA)n Simple_repeat Simple_repeat 2 50 0 1055 254 90 37 chr5 70001090 70001492 -129628658 - MLT1J2 LTR MaLR -23 427 5 2100 124 7 0 chr5 70001526 70001825 -129628325 + AluSx SINE Alu 1 301 -11 640 309 30 10 chr5 70001941 70002142 -129628008 + MIR SINE MIR 7 211 -51 210 209 0 60 chr5 70002488 70002555 -129627595 + T-rich Low_complexity Low_complexity 5 67 0 2076 123 55 0 chr5 70002982 70003275 -129626875 - AluSc SINE Alu 0 309 1 229 280 204 38 chr5 70003789 70003921 -129626229 - L2 LINE L2 0 3272 3119 207 0 0 0 chr5 70004688 70004711 -129625439 + (CCAA)n Simple_repeat Simple_repeat 1 23 0 23 0 0 0 chr5 70005524 70005547 -129624603 + AT_rich Low_complexity Low_complexity 1 23 0 2041 133 0 10 chr5 70006197 70006506 -129623644 + AluSc SINE Alu 1 306 -3 901 247 22 30 chr5 70006698 70006929 -129623221 + MIR SINE MIR 33 261 -1 307 173 200 0 chr5 70007780 70007855 -129622295 + MIR SINE MIR 48 137 -125 321 26 0 0 chr5 70007976 70008014 -129622136 + (TTG)n Simple_repeat Simple_repeat 2 39 0 227 233 58 23 chr5 70009070 70009156 -129620994 + L2 LINE L2 3184 3272 0 238 292 30 107 chr5 70009700 70009827 -129620323 - MER5A DNA MER1_type 0 189 77 2297 109 3 0 chr5 70009827 70010131 -129620019 - AluSx SINE Alu -7 305 1 238 292 30 107 chr5 70010131 70010171 -129619979 - MER5A DNA MER1_type -112 77 35 1138 292 96 35 chr5 70011539 70012080 -129618070 + MLT1L LTR MaLR 37 610 -5 940 180 67 0 chr5 70012592 70012770 -129617380 - MER3 DNA MER1_type -19 190 1 346 315 200 15 chr5 70012849 70013049 -129617101 + MIR SINE MIR 9 245 -17 533 229 208 0 chr5 70013143 70013287 -129616863 + MER5A DNA MER1_type 15 188 -1 937 235 110 145 chr5 70013565 70014175 -129615975 - MLT1G1 LTR MaLR -12 583 1 294 270 0 11 chr5 70015130 70015219 -129614931 + (CA)n Simple_repeat Simple_repeat 1 88 0 1966 201 63 11 chr5 70015552 70016000 -129614150 + MLT1C LTR MaLR 1 393 -3 513 250 90 6 chr5 70016593 70016749 -129613401 - MIR SINE MIR -58 204 36 1000 271 76 44 chr5 70016999 70017457 -129612693 + MLT1J LTR MaLR 39 511 0 2200 92 0 83 chr5 70018026 70018363 -129611787 - AluSx SINE Alu -3 309 1 568 65 0 13 chr5 70018514 70018591 -129611559 + L1PA10 LINE L1 6081 6156 -12 3287 207 66 60 chr5 70019634 70020053 -129610097 - L1M4 LINE L1 -871 5275 4860 2157 134 0 16 chr5 70020053 70020358 -129609792 - AluSq SINE Alu -13 300 1 3287 207 66 60 chr5 70020358 70021144 -129609006 - L1M4 LINE L1 -1286 4860 4062 626 268 60 0 chr5 70021158 70021326 -129608824 - MIR SINE MIR -58 204 27 321 177 32 0 chr5 70021332 70021394 -129608756 - MLT1D LTR MaLR -441 64 1 290 312 46 10 chr5 70023122 70023293 -129606857 - MIR SINE MIR -4 258 8 660 165 8 16 chr5 70023299 70023420 -129606730 - MER5A DNA MER1_type 0 189 70 1511 134 28 147 chr5 70024052 70024273 -129605877 - MER7A DNA MER2_type -2693 345 192 2269 121 8 11 chr5 70024273 70024629 -129605521 + THE1A LTR MaLR 1 355 0 1511 134 28 147 chr5 70024629 70024801 -129605349 - MER7A DNA MER2_type -2846 192 1 372 333 90 17 chr5 70025308 70025485 -129604665 - MIR SINE MIR -25 237 48 247 190 0 0 chr5 70025659 70025717 -129604433 + A-rich Low_complexity Low_complexity 1 58 0 211 258 10 10 chr5 70026081 70026178 -129603972 + GA-rich Low_complexity Low_complexity 1 97 0 417 311 80 0 chr5 70028353 70028504 -129601646 - MIR3 SINE MIR -7 201 39 31 26 0 0 chr5 70028968 70029006 -129601144 + AT_rich Low_complexity Low_complexity 1 38 0 1756 226 66 16 chr5 70029043 70029542 -129600608 - L1MC4 LINE L1 -141 7901 7378 227 320 0 14 chr5 70029888 70030035 -129600115 + L1ME4a LINE L1 2875 3019 -3127 442 290 122 50 chr5 70030201 70030736 -129599414 + L1ME4a LINE L1 4745 5317 -829 620 264 139 34 chr5 70030750 70031389 -129598761 + L1ME4a LINE L1 5394 6113 -8 3654 209 51 7 chr5 70034117 70035485 -129594665 + L1MB7 LINE L1 4753 6175 -9 292 320 0 10 chr5 70035844 70035941 -129594209 + GA-rich Low_complexity Low_complexity 1 96 0 2408 87 3 6 chr5 70036576 70036887 -129593263 - AluSp SINE Alu -3 310 1 210 320 26 26 chr5 70038116 70038194 -129591956 - MIR SINE MIR -82 126 49 484 328 35 96 chr5 70038859 70039173 -129590977 + L2 LINE L2 2969 3263 -9 1779 176 3 0 chr5 70039255 70039539 -129590611 + AluJo SINE Alu 1 285 -27 427 127 42 0 chr5 70039539 70039657 -129590493 + (TA)n Simple_repeat Simple_repeat 1 123 0 234 136 0 0 chr5 70039805 70039849 -129590301 + (TA)n Simple_repeat Simple_repeat 1 44 0 1390 166 68 58 chr5 70039907 70040291 -129589859 - MLT1B LTR MaLR -8 459 1 449 321 43 14 chr5 70041318 70041458 -129588692 + L2 LINE L2 3122 3265 -7 1981 117 11 0 chr5 70043358 70043631 -129586519 + AluSx SINE Alu 1 276 -36 334 284 0 11 chr5 70044490 70044578 -129585572 + MER5A DNA MER1_type 20 106 -83 1600 194 98 3 chr5 70045027 70045404 -129584746 - L1MD2 LINE L1 -12 6347 5935 258 56 0 0 chr5 70045410 70045446 -129584704 + (CA)n Simple_repeat Simple_repeat 2 37 0 2643 130 9 27 chr5 70045453 70045892 -129584258 - Tigger2a DNA MER2_type -3 431 1 8118 113 14 5 chr5 70045932 70047196 -129582954 - Tigger1 DNA MER2_type -14 2404 1129 259 135 48 29 chr5 70047196 70047300 -129582850 + (TA)n Simple_repeat Simple_repeat 2 107 0 2228 160 17 5 chr5 70047306 70047725 -129582425 - L1MD2 LINE L1 -311 5931 5508 326 302 75 59 chr5 70048345 70048600 -129581550 - MIR SINE MIR 0 262 4 440 223 0 34 chr5 70049890 70050065 -129580085 + GA-rich Low_complexity Low_complexity 1 169 0 407 267 58 17 chr5 70050852 70051048 -129579102 - MER20B DNA MER1_type 0 219 17 303 321 110 22 chr5 70051084 70051402 -129578748 + L2 LINE L2 2248 2593 -721 217 381 79 27 chr5 70051677 70052005 -129578145 + L2 LINE L2 2630 2974 -340 253 289 185 64 chr5 70052007 70052055 -129578095 - L2 LINE L2 -595 2719 2678 2167 154 0 6 chr5 70052055 70052392 -129577758 + MER1B DNA MER1_type 2 336 -1 253 289 185 64 chr5 70052392 70052516 -129577634 - L2 LINE L2 -636 2678 2526 1794 175 45 14 chr5 70052599 70052953 -129577197 - MLT1A1 LTR MaLR 0 365 1 551 323 21 65 chr5 70053409 70053630 -129576520 - MIR SINE MIR -48 214 2 27 0 0 0 chr5 70053677 70053704 -129576446 + AT_rich Low_complexity Low_complexity 1 27 0 310 224 140 19 chr5 70053704 70053811 -129576339 - L1ME4a LINE L1 -16 6105 5986 246 318 38 48 chr5 70053863 70054057 -129576093 - L1ME4a LINE L1 -224 5897 5703 3714 144 35 8 chr5 70054057 70054653 -129575497 + LTR9 LTR ERV1 1 612 0 246 318 38 48 chr5 70054653 70054879 -129575271 - L1ME4a LINE L1 -418 5703 5481 801 145 0 0 chr5 70054917 70055067 -129575083 - AluJb SINE Alu 0 318 169 295 245 7 84 chr5 70055094 70055249 -129574901 + L1MEc LINE L1 36 178 -6218 2038 287 58 26 chr5 70055254 70056404 -129573746 + L1MEc LINE L1 217 1403 -4993 2489 221 13 6 chr5 70056407 70056932 -129573218 + MLT1F LTR MaLR 1 529 -13 210 162 0 0 chr5 70056957 70056994 -129573156 + A-rich Low_complexity Low_complexity 1 37 0 2511 236 63 35 chr5 70057024 70057944 -129572206 + L1M4 LINE L1 4454 5399 -747 368 89 0 0 chr5 70057953 70058009 -129572141 + L1MB8 LINE L1 6110 6165 -13 1040 162 5 0 chr5 70058083 70058280 -129571870 + L1PB1 LINE L1 3 200 -6663 * 13750 147 57 17 chr5 70058272 70063731 -129566419 + L1PB1 LINE L1 625 5863 -1004 2181 142 0 0 chr5 70063731 70064041 -129566109 - AluSx SINE Alu -2 310 1 13750 147 57 17 chr5 70064041 70064215 -129565935 + L1PB1 LINE L1 5863 6029 -838 402 21 0 0 chr5 70064215 70064262 -129565888 + (TG)n Simple_repeat Simple_repeat 1 47 0 13750 147 57 17 chr5 70064262 70064592 -129565558 + L1PB1 LINE L1 6029 6831 -36 25 0 0 0 chr5 70064592 70064617 -129565533 + AT_rich Low_complexity Low_complexity 1 25 0 392 228 35 35 chr5 70064699 70064813 -129565337 + L1ME1 LINE L1 6032 6145 -21 2291 81 7 3 chr5 70064944 70065241 -129564909 - AluSp SINE Alu -15 298 1 994 271 129 31 chr5 70065265 70065885 -129564265 - L1MC4a LINE L1 -1865 5943 5263 738 297 63 32 chr5 70065912 70066636 -129563514 - L1MC4a LINE L1 -913 5233 4487 284 249 87 38 chr5 70067003 70067188 -129562962 - L1MC4a LINE L1 -2183 3963 3770 210 37 0 0 chr5 70067188 70067215 -129562935 + (GA)n Simple_repeat Simple_repeat 2 28 0 764 146 0 0 chr5 70067216 70067326 -129562824 - FLAM_C SINE Alu -32 111 2 361 248 94 40 chr5 70067327 70067476 -129562674 - L1P LINE L1 -2358 3788 3632 270 116 0 0 chr5 70067491 70067534 -129562616 + (TG)n Simple_repeat Simple_repeat 2 44 0 698 302 109 60 chr5 70067536 70068201 -129561949 - L1MC4a LINE L1 -2549 3597 2966 1742 169 10 10 chr5 70068201 70068497 -129561653 - AluJb SINE Alu -16 296 1 698 302 109 60 chr5 70068497 70068605 -129561545 - L1MC4a LINE L1 -3180 2966 2865 2172 123 3 7 chr5 70068605 70068913 -129561237 - AluSx SINE Alu -1 311 5 698 302 109 60 chr5 70068913 70069120 -129561030 - L1MC4a LINE L1 -3281 2865 2568 870 275 53 38 chr5 70069375 70069772 -129560378 - HAL1b LINE L1 -675 673 271 286 253 44 0 chr5 70069821 70069912 -129560238 - HAL1b LINE L1 -1165 183 89 24 0 0 0 chr5 70070058 70070082 -129560068 + AT_rich Low_complexity Low_complexity 1 24 0 2297 122 0 0 chr5 70071138 70071442 -129558708 - AluSx SINE Alu -8 304 1 337 289 57 53 chr5 70071904 70072150 -129558000 - L1MC4a LINE L1 -3631 2515 2269 21 57 0 0 chr5 70072226 70072261 -129557889 + AT_rich Low_complexity Low_complexity 1 35 0 620 331 100 51 chr5 70072539 70073376 -129556774 + L1MC4a LINE L1 4018 4895 -1251 2114 115 0 40 chr5 70073616 70073938 -129556212 + AluY SINE Alu 2 310 -1 666 267 232 17 chr5 70074037 70074611 -129555539 + L1MC4a LINE L1 5315 6011 -1797 273 341 37 7 chr5 70074802 70075101 -129555049 - L1M4 LINE L1 -1606 4540 4233 559 239 18 0 chr5 70075312 70075421 -129554729 + MER58A DNA MER1_type 11 121 0 398 278 68 8 chr5 70075477 70075610 -129554540 - MLT1I LTR MaLR -20 389 249 245 236 14 56 chr5 70075661 70075733 -129554417 - MLT1J2 LTR MaLR -298 152 84 301 294 15 0 chr5 70076208 70076276 -129553874 + L2 LINE L2 3203 3271 -1 1002 273 83 29 chr5 70077049 70077529 -129552621 + L1ME4a LINE L1 5364 5869 -252 803 271 64 5 chr5 70078239 70078457 -129551693 - MIR SINE MIR -21 241 11 2110 158 53 8 chr5 70078599 70078960 -129551190 + MLT1C LTR MaLR 3 379 -88 183 338 71 39 chr5 70079375 70079448 -129550702 - L2 LINE L2 0 3313 3244 2172 134 0 0 chr5 70079448 70079747 -129550403 - AluSx SINE Alu -13 299 1 183 338 71 39 chr5 70079747 70079827 -129550323 - L2 LINE L2 -69 3244 3155 339 238 133 0 chr5 70079903 70080008 -129550142 - MARNA DNA Mariner -112 474 356 792 183 23 23 chr5 70080008 70080183 -129549967 + MIR SINE MIR 88 262 0 237 342 105 16 chr5 70080264 70080454 -129549696 - MARNA DNA Mariner -295 291 85 413 316 167 9 chr5 70081606 70081821 -129548329 - MIR SINE MIR 0 262 14 2214 107 19 3 chr5 70082390 70082698 -129547452 - AluSp SINE Alu 0 313 1 4627 106 0 2 chr5 70082923 70083546 -129546604 + HSMAR1 DNA Mariner 666 1287 0 29 70 0 0 chr5 70084696 70084753 -129545397 + AT_rich Low_complexity Low_complexity 1 57 0 280 296 122 0 chr5 70085544 70085642 -129544508 - MIR3 SINE MIR -15 193 84 2200 134 6 3 chr5 70086915 70087251 -129542899 + MER1B DNA MER1_type 1 337 0 2263 89 0 23 chr5 70088015 70088319 -129541831 + AluY SINE Alu 1 297 -14 228 222 16 16 chr5 70089084 70089147 -129541003 - LTR33A LTR ERVL -17 506 444 2206 136 6 18 chr5 70089529 70089867 -129540283 - MER1B DNA MER1_type 0 337 4 23 0 0 0 chr5 70090084 70090107 -129540043 + AT_rich Low_complexity Low_complexity 1 23 0 419 217 180 58 chr5 70090107 70090296 -129539854 + MIR SINE MIR 1 212 -50 271 333 107 6 chr5 70090856 70091015 -129539135 + L2 LINE L2 2665 2839 -475 7562 22 5 0 chr5 70092494 70093453 -129536697 - L1PA3 LINE L1 -3 6152 5199 1625 212 73 32 chr5 70093737 70094147 -129536003 - MLT1D LTR MaLR -8 497 71 8391 66 2 1 chr5 70094147 70095198 -129534952 + MER11C LTR ERVK 1 1052 -19 639 172 16 8 chr5 70095198 70095320 -129534830 - MLT1D LTR MaLR -382 123 1 352 252 82 61 chr5 70095328 70095475 -129534675 - MIR SINE MIR -74 188 39 317 253 0 32 chr5 70095819 70095914 -129534236 - MIR SINE MIR -46 216 125 849 73 0 41 chr5 70096074 70096197 -129533953 - AluY SINE Alu -12 299 182 645 250 147 0 chr5 70096363 70096519 -129533631 + MER5A DNA MER1_type 10 188 -1 2135 248 37 9 chr5 70097610 70098154 -129531996 + L1MEc LINE L1 36 594 -5802 1614 240 105 50 chr5 70098156 70098681 -129531469 - MLT1E2 LTR MaLR -2 624 71 2842 273 54 32 chr5 70098758 70099990 -129530160 + L1MEc LINE L1 588 1845 -4551 1516 186 42 18 chr5 70099995 70100280 -129529870 - AluJo SINE Alu -20 292 1 758 271 29 10 chr5 70100346 70100553 -129529597 - MER58A DNA MER1_type -11 213 3 924 242 36 31 chr5 70100557 70100913 -129529237 + L1MEc LINE L1 1867 2224 -4172 558 261 43 24 chr5 70100921 70101174 -129528976 + L1ME1 LINE L1 937 1194 -5232 645 245 231 26 chr5 70101270 70101694 -129528456 + L1ME1 LINE L1 1442 2028 -4474 428 231 0 11 chr5 70101698 70101789 -129528361 - MER58B DNA MER1_type 0 341 252 2931 233 22 19 chr5 70101887 70102055 -129528095 + L1ME1 LINE L1 2117 2283 -4143 2396 75 0 3 chr5 70102055 70102350 -129527800 - AluY SINE Alu -17 294 1 2931 233 22 19 chr5 70102350 70102855 -129527295 + L1ME1 LINE L1 2283 2766 -3660 1802 166 0 17 chr5 70102855 70103156 -129526994 + AluJo SINE Alu 1 296 -16 2931 233 22 19 chr5 70103156 70103576 -129526574 + L1ME1 LINE L1 2766 3184 -3242 9179 212 57 20 chr5 70103586 70105878 -129524272 + L1MA4A LINE L1 526 2869 -3980 13346 162 35 27 chr5 70105879 70107461 -129522689 + L1MA4A LINE L1 3136 4705 -2300 1641 110 4 0 chr5 70107461 70107688 -129522462 + AluSg/x SINE Alu 85 312 0 13346 162 35 27 chr5 70107688 70109044 -129521106 + L1MA4A LINE L1 4705 6113 -892 2374 72 0 7 chr5 70109044 70109348 -129520802 + AluY SINE Alu 1 302 -9 13346 162 35 27 chr5 70109348 70110237 -129519913 + L1MA4A LINE L1 6113 6994 -11 233 217 0 0 chr5 70110263 70110332 -129519818 + L1ME1 LINE L1 3175 3243 -3183 1852 175 35 114 chr5 70110339 70110917 -129519233 + L1ME1 LINE L1 5872 6403 -43 508 211 41 27 chr5 70110816 70110963 -129519187 + L1MA10 LINE L1 6463 6611 -3 * 474 173 0 91 chr5 70114028 70114138 -129516012 - MER5B DNA MER1_type -78 100 1 224 350 66 29 chr5 70114287 70114424 -129515726 + MIR SINE MIR 89 230 -32 442 269 0 69 chr5 70114884 70114979 -129515171 + L2 LINE L2 3193 3278 -35 1937 130 99 30 chr5 70114979 70115341 -129514809 - MLT1B LTR MaLR -1 389 3 442 269 0 69 chr5 70115341 70115375 -129514775 + L2 LINE L2 3278 3313 0 280 368 68 60 chr5 70115426 70115676 -129514474 - L2 LINE L2 -17 3255 3004 12066 42 1 0 chr5 70115677 70117186 -129512964 - L1P LINE L1 -2335 3811 2302 11761 40 1 1 chr5 70117186 70119489 -129510661 + L1PA5 LINE L1 3869 6172 0 273 317 75 31 chr5 70119547 70119774 -129510376 - L2 LINE L2 -618 2696 2460 282 114 0 0 chr5 70119785 70119829 -129510321 - MLT1F1 LTR MaLR -523 44 1 623 239 22 0 chr5 70119829 70119963 -129510187 + MER5A DNA MER1_type 37 173 -16 234 150 0 0 chr5 70120131 70120171 -129509979 + (CGTG)n Simple_repeat Simple_repeat 3 42 0 237 65 0 0 chr5 70120382 70120413 -129509737 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 664 246 52 62 chr5 70121046 70121120 -129509030 + MIR SINE MIR 20 93 -169 4283 105 14 3 chr5 70121120 70121746 -129508404 + MER41B LTR ERV1 1 633 -2 664 246 52 62 chr5 70121746 70121882 -129508268 + MIR SINE MIR 93 228 -34 272 315 11 22 chr5 70121933 70122022 -129508128 + MIR SINE MIR 40 127 -81 2254 133 34 8 chr5 70122526 70123069 -129507081 + LTR49 LTR ERV1 1 593 -2 283 212 18 49 chr5 70123264 70123428 -129506722 + L1ME LINE L1 5266 5422 -699 321 252 37 56 chr5 70123510 70123617 -129506533 + L1ME LINE L1 5551 5655 -466 218 239 0 0 chr5 70123806 70123852 -129506298 - L2 LINE L2 -310 2962 2917 247 284 25 12 chr5 70123919 70124000 -129506150 + L2 LINE L2 3194 3275 -38 350 261 54 0 chr5 70124059 70124170 -129505980 + HAL1b LINE L1 1215 1331 -17 341 308 44 91 chr5 70124438 70124802 -129505348 + L2 LINE L2 2921 3267 -5 416 220 0 9 chr5 70125760 70125869 -129504281 + GA-rich Low_complexity Low_complexity 4 111 0 558 255 97 35 chr5 70126041 70126331 -129503819 - L1ME4a LINE L1 -44 6077 5770 1318 86 0 35 chr5 70126747 70126945 -129503205 + L1PA8 LINE L1 5982 6172 0 21 36 0 0 chr5 70128784 70128812 -129501338 + AT_rich Low_complexity Low_complexity 1 28 0 1558 283 42 41 chr5 70128986 70129468 -129500682 + L1ME LINE L1 141 621 -5775 846 144 0 0 chr5 70129468 70129586 -129500564 + FLAM_C SINE Alu 1 118 -15 1558 283 42 41 chr5 70129586 70130787 -129499363 + L1ME LINE L1 621 1964 -4432 2002 141 6 10 chr5 70130869 70131182 -129498968 - AluJo SINE Alu 0 312 1 226 237 186 13 chr5 70131217 70131373 -129498777 + L1ME LINE L1 2178 2360 -4036 500 165 0 10 chr5 70131822 70131919 -129498231 - L1MD3 LINE L1 -338 7657 7562 375 238 0 40 chr5 70131919 70132020 -129498130 - MLT1F1 LTR MaLR -436 131 35 440 208 27 20 chr5 70132020 70132169 -129497981 - L1MC3 LINE L1 -688 7097 6948 5115 193 69 24 chr5 70132205 70135320 -129494830 - L1MC1 LINE L1 0 6333 2937 524 259 49 16 chr5 70135357 70135655 -129494495 - L1MC3 LINE L1 -304 5817 5542 216 0 0 0 chr5 70136265 70136289 -129493861 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 362 268 313 17 chr5 70138460 70138639 -129491511 - MIR SINE MIR -16 246 15 299 255 75 43 chr5 70139501 70139595 -129490555 + MIR SINE MIR 50 146 -116 324 297 84 63 chr5 70141046 70141142 -129489008 + L2 LINE L2 3029 3122 -150 225 0 0 0 chr5 70141142 70141167 -129488983 + (CA)n Simple_repeat Simple_repeat 1 25 0 324 297 84 63 chr5 70141167 70141309 -129488841 + L2 LINE L2 3122 3272 0 2225 136 0 0 chr5 70142635 70142944 -129487206 - AluSp SINE Alu -4 309 1 317 269 0 0 chr5 70144094 70144161 -129485989 - MIR3 SINE MIR -48 160 94 695 257 92 7 chr5 70144229 70144443 -129485707 + MIR SINE MIR 31 248 -14 34 24 0 0 chr5 70144528 70144569 -129485581 + AT_rich Low_complexity Low_complexity 1 41 0 307 302 127 24 chr5 70144622 70144764 -129485386 - MIR SINE MIR -45 163 8 231 119 45 30 chr5 70145943 70146010 -129484140 + CT-rich Low_complexity Low_complexity 4 71 0 767 272 33 16 chr5 70146478 70146721 -129483429 + MIR SINE MIR 8 254 -8 376 316 35 26 chr5 70147230 70147422 -129482728 - MIR SINE MIR -53 209 14 767 268 33 24 chr5 70148930 70149143 -129481007 + MIR SINE MIR 7 221 -41 505 245 91 41 chr5 70151460 70151778 -129478372 - L1MC4 LINE L1 -6 8036 7703 303 130 0 0 chr5 70151800 70151854 -129478296 + (CA)n Simple_repeat Simple_repeat 2 55 0 764 235 63 14 chr5 70151995 70152280 -129477870 + L1MC4 LINE L1 6916 7214 -828 256 301 137 32 chr5 70152285 70152677 -129477473 - L1MC4 LINE L1 -1281 6539 6084 207 88 0 0 chr5 70152749 70152783 -129477367 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 246 330 44 0 chr5 70153141 70153232 -129476918 + L2 LINE L2 2704 2798 -516 209 333 0 0 chr5 70153999 70154050 -129476100 + MER5B DNA MER1_type 1 51 -127 * 246 247 14 27 chr5 70154034 70154107 -129476043 - MER5A DNA MER1_type -74 115 44 333 269 194 15 chr5 70155078 70155279 -129474871 + MIR SINE MIR 12 248 -14 957 122 13 0 chr5 70155285 70155441 -129474709 - L1MB3 LINE L1 0 6183 6026 5738 182 89 13 chr5 70155513 70156954 -129473196 + Looper DNA T2_type 8 1557 -1 1969 142 17 7 chr5 70157472 70157767 -129472383 + AluJb SINE Alu 1 298 -14 232 333 48 19 chr5 70158046 70158151 -129471999 + L3 LINE CR1 1450 1557 -20 634 294 74 34 chr5 70158328 70158801 -129471349 + LTR33 LTR ERVL 24 515 -6 196 275 154 11 chr5 70158801 70158892 -129471258 + MIR SINE MIR 159 262 0 1749 203 3 14 chr5 70158971 70159316 -129470834 - MER58B DNA MER1_type 0 341 1 318 262 221 14 chr5 70159946 70160091 -129470059 + MER5B DNA MER1_type 1 175 -3 191 215 13 101 chr5 70160032 70160111 -129470039 - MER5A DNA MER1_type -117 72 1 * 831 300 76 76 chr5 70160298 70160775 -129469375 - L2 LINE L2 0 3272 2781 190 346 26 13 chr5 70160829 70160907 -129469243 - MIR SINE MIR -103 105 27 550 245 175 7 chr5 70162899 70163042 -129467108 + MER5A DNA MER1_type 9 175 -14 246 242 32 102 chr5 70163557 70163686 -129466464 + MIR SINE MIR 26 151 -64 278 225 117 45 chr5 70164090 70164201 -129465949 + LTR33A LTR ERVL 1 119 -404 613 255 74 33 chr5 70164300 70164571 -129465579 + LTR33A LTR ERVL 238 519 -4 367 303 80 12 chr5 70166905 70167067 -129463083 + MIR SINE MIR 15 187 -75 360 357 28 16 chr5 70167092 70167347 -129462803 + L2 LINE L2 2720 2977 -337 460 349 64 9 chr5 70167406 70167624 -129462526 + MIR SINE MIR 12 241 -21 195 277 146 46 chr5 70167691 70167821 -129462329 + L2 LINE L2 3161 3303 -10 * 281 206 137 0 chr5 70167818 70167891 -129462259 + MIR SINE MIR 178 260 -2 840 153 202 6 chr5 70167959 70168142 -129462008 + MER20 DNA MER1_type 1 219 0 3325 164 33 34 chr5 70168859 70169534 -129460616 + L1MB5 LINE L1 5493 6166 -8 2286 143 6 3 chr5 70170511 70170875 -129459275 + MLT1A1 LTR MaLR 1 365 0 1489 110 12 41 chr5 70172805 70173051 -129457099 - MER1B DNA MER1_type 0 339 101 239 179 0 0 chr5 70173056 70173095 -129457055 - MER1B DNA MER1_type -298 39 1 24 0 0 0 chr5 70174007 70174031 -129456119 + AT_rich Low_complexity Low_complexity 1 24 0 515 285 39 53 chr5 70174817 70175024 -129455126 + MIR SINE MIR 35 238 -24 301 284 74 0 chr5 70176041 70176122 -129454028 - L2 LINE L2 0 3272 3186 502 310 7 0 chr5 70176792 70176934 -129453216 - L2 LINE L2 0 3313 3171 270 302 39 0 chr5 70177029 70177158 -129452992 - LTR67 LTR ERVL -21 536 403 273 235 24 59 chr5 70177610 70177695 -129452455 - L2 LINE L2 -244 3069 2988 633 373 79 5 chr5 70177734 70178176 -129451974 - L2 LINE L2 -464 2850 2376 672 291 83 48 chr5 70179949 70180369 -129449781 + MLT1L LTR MaLR 158 592 -23 944 175 39 148 chr5 70180780 70181214 -129448936 + L1ME1 LINE L1 5737 6123 -43 468 211 41 27 chr5 70181113 70181260 -129448890 + L1MA10 LINE L1 6183 6331 -3 * 478 173 0 91 chr5 70184324 70184434 -129445716 - MER5B DNA MER1_type -78 100 1 196 301 12 48 chr5 70184637 70184720 -129445430 + MIR SINE MIR 151 230 -32 443 269 0 69 chr5 70185180 70185275 -129444875 + L2 LINE L2 3193 3278 -35 1945 127 99 30 chr5 70185275 70185637 -129444513 - MLT1B LTR MaLR -1 389 3 443 269 0 69 chr5 70185637 70185671 -129444479 + L2 LINE L2 3278 3313 0 275 368 68 60 chr5 70185722 70185972 -129444178 - L2 LINE L2 -17 3255 3004 6025 38 2 0 chr5 70185973 70186771 -129443379 - L1P LINE L1 -2335 3811 3012 776 271 72 48 chr5 70187250 70188016 -129442134 - L1MEd LINE L1 -4865 1254 592 1895 141 33 36 chr5 70188336 70188698 -129441452 - THE1C LTR MaLR -1 374 14 21 36 0 0 chr5 70191880 70191908 -129438242 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr5 70192034 70192060 -129438090 + (CA)n Simple_repeat Simple_repeat 2 27 0 299 0 78 0 chr5 70192499 70192550 -129437600 + (TA)n Simple_repeat Simple_repeat 1 55 0 189 0 0 0 chr5 70192560 70192581 -129437569 + (CA)n Simple_repeat Simple_repeat 2 22 0 775 292 88 21 chr5 70192612 70192670 -129437480 - L1ME3 LINE L1 -278 5867 5814 1008 126 107 42 chr5 70192670 70192885 -129437265 + MER30 DNA MER1_type 2 230 0 775 292 88 21 chr5 70192885 70193711 -129436439 - L1ME3 LINE L1 -331 5814 4925 37362 67 15 3 chr5 70193804 70198989 -129431161 + L1PA5 LINE L1 20 5262 -884 6773 42 1 1 chr5 70199000 70199823 -129430327 + L1PA5 LINE L1 5330 6152 -2 709 294 46 5 chr5 70199830 70200048 -129430102 + LTR16A LTR ERVL 206 432 -18 3832 273 62 33 chr5 70200075 70201114 -129429036 + HERV16 LTR ERVL 33 1125 -3871 780 222 88 5 chr5 70201114 70201308 -129428842 + MER58C DNA MER1_type 3 212 -3 3832 273 62 33 chr5 70201308 70201684 -129428466 + HERV16 LTR ERVL 1125 1489 -3507 1735 252 9 2 chr5 70202136 70202565 -129427585 + LTR16A LTR ERVL 19 450 0 530 281 85 55 chr5 70202651 70203559 -129426591 - L1ME3 LINE L1 -1955 4174 3240 19416 33 2 5 chr5 70204061 70207215 -129422935 - L1PA3 LINE L1 0 6155 3012 795 273 72 46 chr5 70207694 70208459 -129421691 - L1ME3 LINE L1 -4865 1254 592 1878 144 33 36 chr5 70208779 70209141 -129421009 - THE1C LTR MaLR -1 374 14 21 36 0 0 chr5 70212336 70212364 -129417786 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr5 70212490 70212516 -129417634 + (CA)n Simple_repeat Simple_repeat 2 27 0 391 285 95 38 chr5 70214388 70214546 -129415604 - MIR SINE MIR -64 198 32 2048 158 48 5 chr5 70214893 70215267 -129414883 - MLT1B LTR MaLR 0 390 1 517 312 50 20 chr5 70215815 70216017 -129414133 - MIR SINE MIR -43 219 12 229 296 37 0 chr5 70216442 70216523 -129413627 + L2 LINE L2 3168 3251 -21 187 260 0 0 chr5 70216484 70216534 -129413616 + MIR SINE MIR 209 258 -4 * 2243 102 0 3 chr5 70218680 70218975 -129411175 + AluSx SINE Alu 1 294 -18 7054 92 4 12 chr5 70219129 70220109 -129410041 - L1P LINE L1 -3445 2701 1730 3330 91 8 15 chr5 70220108 70220382 -129409768 + L1PA7 LINE L1 4440 4711 -1435 * 2524 69 3 0 chr5 70220382 70220685 -129409465 + AluY SINE Alu 1 304 -7 3330 91 8 15 chr5 70220685 70220883 -129409267 + L1PA7 LINE L1 4711 4909 -1237 7551 48 12 1 chr5 70220886 70222041 -129408109 + L1PA7 LINE L1 4990 6153 -1 266 314 33 39 chr5 70222120 70222273 -129407877 - LTR16C LTR ERVL 0 491 340 1254 91 0 0 chr5 70222925 70223090 -129407060 - AluY SINE Alu -3 308 144 2480 57 0 0 chr5 70224169 70224470 -129405680 + AluY SINE Alu 5 305 -6 301 325 43 0 chr5 70224660 70224823 -129405327 - MER102a DNA MER1_type -8 322 153 2841 113 9 60 chr5 70225227 70225271 -129404879 - MSTA LTR MaLR 0 428 383 1590 207 30 3 chr5 70225271 70225392 -129404758 + AluJb SINE Alu 5 121 -191 180 0 0 0 chr5 70225392 70225412 -129404738 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1590 207 30 3 chr5 70225412 70225590 -129404560 + AluJb SINE Alu 121 312 0 2841 113 9 60 chr5 70225590 70225996 -129404154 - MSTA LTR MaLR -45 383 1 197 189 27 0 chr5 70226373 70226410 -129403740 - MIR SINE MIR -63 145 108 323 275 92 0 chr5 70227012 70227121 -129403029 - MIR3 SINE MIR -31 177 59 412 246 53 0 chr5 70227306 70227420 -129402730 - MER103 DNA DNA -3 163 44 338 336 47 23 chr5 70229625 70229753 -129400397 - L2 LINE L2 -1 3271 3141 861 178 0 0 chr5 70230823 70230952 -129399198 - FLAM_A SINE Alu -3 130 2 199 268 0 0 chr5 70231320 70231361 -129398789 - L2 LINE L2 -8 3264 3224 629 241 28 23 chr5 70231530 70231716 -129398434 + MIR SINE MIR 51 236 -26 239 169 77 15 chr5 70233670 70233735 -129396415 - Zaphod DNA AcHobo -1851 2180 2112 1959 167 62 3 chr5 70236271 70236594 -129393556 - MER2 DNA MER2_type -2 342 1 869 280 100 43 chr5 70236606 70236636 -129393514 + MLT1J1 LTR MaLR 2 29 -417 2186 119 3 7 chr5 70236636 70236938 -129393212 - AluSq SINE Alu -12 301 1 869 280 100 43 chr5 70236938 70237328 -129392822 + MLT1J1 LTR MaLR 29 446 0 252 309 98 20 chr5 70237362 70237566 -129392584 + L1ME4a LINE L1 5833 6052 -69 760 279 64 0 chr5 70238480 70238713 -129391437 - LTR16A LTR ERVL 0 450 203 263 224 17 0 chr5 70238749 70238807 -129391343 - LTR16A1 LTR ERVL -336 121 63 247 385 88 15 chr5 70239067 70239272 -129390878 + L2 LINE L2 2872 3091 -181 377 244 118 0 chr5 70241055 70241174 -129388976 + L2 LINE L2 3140 3272 0 344 286 149 19 chr5 70242402 70242563 -129387587 - MIR SINE MIR -11 251 70 468 280 0 0 chr5 70242584 70242691 -129387459 - MER5B DNA MER1_type -2 176 70 387 310 62 0 chr5 70243898 70244011 -129386139 - MIR3 SINE MIR -2 206 87 404 300 50 109 chr5 70244125 70244545 -129385605 + L2 LINE L2 2348 2742 -572 272 89 0 22 chr5 70244569 70244614 -129385536 + (TTTC)n Simple_repeat Simple_repeat 2 45 0 1392 126 89 20 chr5 70244620 70244867 -129385283 - THE1C LTR MaLR -110 265 2 412 277 96 27 chr5 70244947 70245135 -129385015 - MIR SINE MIR -14 248 48 430 230 90 0 chr5 70245480 70245580 -129384570 - MER81 DNA DNA 0 114 6 232 386 26 0 chr5 70245767 70245881 -129384269 - L2 LINE L2 -2890 424 308 388 296 0 40 chr5 70246020 70246145 -129384005 + MIR SINE MIR 35 154 -108 1975 176 42 8 chr5 70247208 70247561 -129382589 - MLT1A1 LTR MaLR 0 365 1 342 222 37 65 chr5 70247826 70247934 -129382216 - MER91C DNA MER1_type -35 105 1 365 239 88 8 chr5 70248081 70248201 -129381949 - MIR3 SINE MIR 0 208 78 349 213 148 66 chr5 70249705 70249827 -129380323 - L2 LINE L2 0 3313 3182 2343 89 3 13 chr5 70254734 70255049 -129375101 + AluSx SINE Alu 1 312 0 2319 246 110 24 chr5 70256665 70258043 -129372107 + L1ME LINE L1 30 1610 -4470 21 57 0 0 chr5 70258191 70258226 -129371924 + AT_rich Low_complexity Low_complexity 1 35 0 2057 179 47 49 chr5 70261125 70261633 -129368517 + Charlie4a DNA MER1_type 2 508 0 222 409 42 28 chr5 70261756 70261898 -129368252 + L2 LINE L2 2996 3139 -133 230 291 159 31 chr5 70262783 70263103 -129367047 + L2 LINE L2 533 893 -2421 5877 29 3 9 chr5 70263766 70264429 -129365721 - L1PA3 LINE L1 -3 6152 5494 30 0 0 0 chr5 70264651 70264681 -129365469 + AT_rich Low_complexity Low_complexity 1 30 0 2088 169 41 8 chr5 70265214 70265605 -129364545 - L1MB8 LINE L1 0 6178 5775 303 303 111 0 chr5 70265720 70265882 -129364268 + MIR SINE MIR 82 261 -1 341 326 174 18 chr5 70266122 70266340 -129363810 - L1MC4a LINE L1 -1868 5940 5689 621 279 69 26 chr5 70268658 70268891 -129361259 - MIR SINE MIR -4 258 16 1045 206 156 29 chr5 70270029 70270612 -129359538 + LTR50 LTR ERVL 3 508 -15 335 274 19 38 chr5 70271384 70271490 -129358660 + MIR SINE MIR 49 152 -110 758 236 102 19 chr5 70272421 70272637 -129357513 - MIR SINE MIR -21 241 8 249 318 37 9 chr5 70273870 70273977 -129356173 - L2 LINE L2 -1 3312 3203 270 350 0 10 chr5 70274938 70275041 -129355109 - MIR SINE MIR -71 191 90 461 17 17 0 chr5 70275422 70275480 -129354670 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2458 127 30 25 chr5 70276744 70277106 -129353044 + THE1B LTR MaLR 1 364 0 2460 78 0 0 chr5 70277846 70278142 -129352008 - AluSc SINE Alu -13 296 1 319 283 58 29 chr5 70278990 70279128 -129351022 + MIR3 SINE MIR 18 159 -49 207 0 0 0 chr5 70279610 70279633 -129350517 + (TC)n Simple_repeat Simple_repeat 2 24 0 264 333 12 0 chr5 70279633 70279714 -129350436 + C-rich Low_complexity Low_complexity 4 85 0 835 279 87 53 chr5 70280070 70280576 -129349574 + L1MC4a LINE L1 5526 6048 -1760 204 308 158 17 chr5 70280833 70280953 -129349197 + MIR3 SINE MIR 8 144 -64 2169 151 100 5 chr5 70281036 70281427 -129348723 - MSTA LTR MaLR 0 428 1 333 314 41 52 chr5 70281450 70281530 -129348620 + MIR SINE MIR 50 129 -133 1954 142 0 17 chr5 70281530 70281825 -129348325 + AluSx SINE Alu 1 290 -22 333 314 41 52 chr5 70281825 70281916 -129348234 + MIR SINE MIR 129 219 -43 517 228 245 24 chr5 70281921 70282215 -129347935 + L2 LINE L2 2955 3313 0 330 315 0 19 chr5 70282334 70282442 -129347708 - MIR SINE MIR -142 120 15 2545 61 0 0 chr5 70283084 70283379 -129346771 - AluY SINE Alu -16 295 1 552 115 13 0 chr5 70283660 70283738 -129346412 + MADE1 DNA Mariner 2 80 0 926 191 0 0 chr5 70283812 70283964 -129346186 + FRAM SINE Alu 1 152 -24 1990 152 0 3 chr5 70284042 70284345 -129345805 - AluJb SINE Alu -10 302 1 243 323 45 111 chr5 70284578 70284776 -129345374 + MER5A DNA MER1_type 2 186 -3 291 356 192 5 chr5 70285155 70285779 -129344371 - L2 LINE L2 -969 2345 1605 1043 209 34 34 chr5 70285812 70286047 -129344103 - MLT1A2 LTR MaLR 0 374 140 6059 147 29 4 chr5 70286049 70286771 -129343379 + L1MA4 LINE L1 4559 5262 -1038 279 54 0 0 chr5 70286771 70286808 -129343342 + (CA)n Simple_repeat Simple_repeat 2 38 0 6059 147 29 4 chr5 70286808 70287781 -129342369 + L1MA4 LINE L1 5262 6293 -7 761 155 6 122 chr5 70287796 70287977 -129342173 - MLT1A2 LTR MaLR -214 160 1 207 337 148 50 chr5 70288384 70288986 -129341164 - L2 LINE L2 -2492 822 162 531 231 43 113 chr5 70290008 70290072 -129340078 + L1ME4a LINE L1 5518 5585 -536 2136 139 0 10 chr5 70290072 70290382 -129339768 + AluSx SINE Alu 2 308 -4 531 231 43 113 chr5 70290382 70290757 -129339393 + L1ME4a LINE L1 5585 6121 0 333 0 0 0 chr5 70291217 70291254 -129338896 + (CA)n Simple_repeat Simple_repeat 1 37 0 220 367 117 16 chr5 70292551 70292739 -129337411 + L3 LINE CR1 337 543 -1034 567 280 27 7 chr5 70292755 70292905 -129337245 + MIR SINE MIR 1 153 -109 825 256 99 40 chr5 70292955 70293081 -129337069 + MLT1J2 LTR MaLR 71 188 -262 231 36 0 0 chr5 70293081 70293109 -129337041 + (TC)n Simple_repeat Simple_repeat 1 28 0 825 256 99 40 chr5 70293109 70293306 -129336844 + MLT1J2 LTR MaLR 188 413 -37 2558 123 46 73 chr5 70293484 70294119 -129336031 - MER4B LTR ERV1 0 766 1 851 266 67 55 chr5 70294335 70294459 -129335691 + MLT1I LTR MaLR 65 186 -223 4361 178 86 12 chr5 70294459 70295228 -129334922 - LTR1B LTR ERV1 0 826 1 851 266 67 55 chr5 70295228 70295430 -129334720 + MLT1I LTR MaLR 186 395 -14 554 338 123 38 chr5 70295450 70296189 -129333961 + L3 LINE CR1 548 1349 -228 1592 190 54 71 chr5 70297291 70297839 -129332311 - LTR28 LTR ERV1 -13 813 343 710 329 103 24 chr5 70297992 70298457 -129331693 + L2 LINE L2 2475 2976 -338 671 325 71 4 chr5 70298678 70298933 -129331217 + LTR16C LTR ERVL 163 434 -57 555 188 0 0 chr5 70298937 70299033 -129331117 + L1MD3 LINE L1 7889 7984 -11 1589 183 18 14 chr5 70299124 70299409 -129330741 + AluJo SINE Alu 1 286 -26 2351 210 45 38 chr5 70299731 70300577 -129329573 + L1ME2 LINE L1 4966 5824 -340 1807 133 3 70 chr5 70300577 70300893 -129329257 + AluSx SINE Alu 1 295 -17 2351 210 45 38 chr5 70300893 70300956 -129329194 + L1ME2 LINE L1 5824 5885 -279 1937 152 18 29 chr5 70301834 70302176 -129327974 + L1MB3 LINE L1 5839 6176 -7 25 0 0 0 chr5 70302432 70302457 -129327693 + AT_rich Low_complexity Low_complexity 1 25 0 225 309 65 43 chr5 70302965 70303104 -129327046 - MIR SINE MIR -27 235 94 351 0 0 0 chr5 70303322 70303361 -129326789 + (TG)n Simple_repeat Simple_repeat 1 39 0 525 336 138 28 chr5 70303667 70304195 -129325955 - L2 LINE L2 -95 3177 2583 296 302 74 15 chr5 70304974 70305176 -129324974 + L1ME4a LINE L1 5660 5873 -248 441 308 58 0 chr5 70305176 70305296 -129324854 + L2 LINE L2 3187 3313 0 308 241 116 9 chr5 70305338 70305450 -129324700 + L1ME4a LINE L1 5941 6064 -57 419 333 158 12 chr5 70306623 70306863 -129323287 - L3 LINE CR1 -45 1532 1258 1315 274 105 67 chr5 70306921 70308355 -129321795 + L1MEd LINE L1 211 1731 -4579 379 308 120 39 chr5 70308367 70308998 -129321152 + L1MEd LINE L1 1790 2430 -3699 280 310 63 31 chr5 70309000 70309252 -129320898 + L1MEd LINE L1 2290 2574 -3555 1008 229 90 11 chr5 70309489 70309768 -129320382 - MER20B DNA MER1_type -264 519 219 1569 173 11 4 chr5 70309830 70310101 -129320049 + AluSx SINE Alu 1 273 -39 250 227 0 47 chr5 70310142 70310270 -129319880 + GA-rich Low_complexity Low_complexity 1 122 0 689 140 0 54 chr5 70310272 70310458 -129319692 + (GGGA)n Simple_repeat Simple_repeat 2 177 0 373 234 0 14 chr5 70310536 70310681 -129319469 + A-rich Low_complexity Low_complexity 5 147 0 188 35 35 0 chr5 70315687 70315716 -129314434 + (GA)n Simple_repeat Simple_repeat 1 30 0 180 135 0 0 chr5 70315755 70315792 -129314358 + (TC)n Simple_repeat Simple_repeat 1 37 0 285 301 6 34 chr5 70318412 70318588 -129311562 + CT-rich Low_complexity Low_complexity 2 172 0 356 179 0 12 chr5 70318634 70318718 -129311432 + GA-rich Low_complexity Low_complexity 3 85 0 1312 114 30 10 chr5 70318728 70318930 -129311220 + L1PB2 LINE L1 5944 6149 -2 271 353 15 23 chr5 70318934 70319067 -129311083 - MER20B DNA MER1_type -588 195 64 2978 161 55 53 chr5 70319271 70320473 -129309677 - L1MC3 LINE L1 -4 8199 7001 2040 155 0 0 chr5 70320473 70320769 -129309381 + AluJb SINE Alu 1 296 -16 2978 161 55 53 chr5 70320769 70321609 -129308541 - L1MC3 LINE L1 -1202 7001 6034 2210 101 7 7 chr5 70321609 70321915 -129308235 + AluSx SINE Alu 1 306 -6 2978 161 55 53 chr5 70321915 70322369 -129307781 - L1MC3 LINE L1 -2169 6034 5582 886 238 98 81 chr5 70322387 70322705 -129307445 - MSTD LTR MaLR 0 396 58 2026 115 7 3 chr5 70322705 70322992 -129307158 + AluSq SINE Alu 1 288 -25 886 238 98 81 chr5 70322992 70323051 -129307099 - MSTD LTR MaLR -338 58 1 1743 223 204 0 chr5 70323051 70323732 -129306418 - L1MC3 LINE L1 -1001 5563 4744 * 4041 211 51 35 chr5 70323726 70325510 -129304640 - L1MC3 LINE L1 -4405 2340 302 3221 67 20 33 chr5 70325510 70325960 -129304190 + MLT2A1 LTR ERVL 1 444 0 4041 211 51 35 chr5 70325960 70326255 -129303895 - L1MC3 LINE L1 -6443 302 13 269 360 82 14 chr5 70326470 70326617 -129303533 - L2 LINE L2 -4 3268 3112 22 35 0 0 chr5 70327430 70327459 -129302691 + AT_rich Low_complexity Low_complexity 1 29 0 536 250 79 12 chr5 70327730 70327894 -129302256 - MER5B DNA MER1_type -3 175 1 1666 210 122 11 chr5 70329271 70329737 -129300413 - LTR33 LTR ERVL -2 519 2 1716 179 26 19 chr5 70330170 70330478 -129299672 + AluJo SINE Alu 1 310 -2 24 0 0 0 chr5 70333812 70333836 -129296314 + AT_rich Low_complexity Low_complexity 1 24 0 241 259 81 51 chr5 70333882 70334118 -129296032 + L1ME4a LINE L1 4370 4612 -1534 236 253 128 39 chr5 70334193 70334529 -129295621 + L1ME4a LINE L1 5756 6121 0 483 234 99 5 chr5 70336627 70336828 -129293322 + L1MC4 LINE L1 7823 8042 0 475 261 150 14 chr5 70337768 70338044 -129292106 + L1M4c LINE L1 2304 2618 -3764 332 322 82 49 chr5 70338197 70338464 -129291686 + L1M4c LINE L1 2996 3271 -3111 1670 162 3 35 chr5 70338632 70338922 -129291228 - AluSx SINE Alu -30 282 2 216 97 0 0 chr5 70339707 70339738 -129290412 + (A)n Simple_repeat Simple_repeat 1 31 0 453 259 0 32 chr5 70340527 70340685 -129289465 - MER104 DNA Tc2 0 180 28 803 139 60 0 chr5 70340817 70340968 -129289182 - L1MA4 LINE L1 -2 6298 6139 331 139 42 0 chr5 70340969 70341041 -129289109 - L1MA4 LINE L1 -225 6075 6001 488 345 48 23 chr5 70341685 70342082 -129288068 - L1ME3 LINE L1 -286 5876 5470 24 77 0 0 chr5 70342276 70342328 -129287822 + AT_rich Low_complexity Low_complexity 1 52 0 354 280 80 16 chr5 70342457 70342582 -129287568 - MLT1K LTR MaLR -325 263 131 252 322 23 11 chr5 70342672 70342759 -129287391 - MIR SINE MIR -162 100 13 31 26 0 0 chr5 70343334 70343372 -129286778 + AT_rich Low_complexity Low_complexity 1 38 0 1770 51 0 0 chr5 70344686 70344900 -129285250 - AluY SINE Alu -1 310 97 588 253 140 23 chr5 70346194 70346547 -129283603 + L1ME4a LINE L1 5501 5897 -224 664 232 65 24 chr5 70347309 70347707 -129282443 + LTR16B LTR ERVL 1 464 0 1132 189 88 101 chr5 70347741 70348126 -129282024 + MLT1E2 LTR MaLR 179 559 -67 2520 30 3 10 chr5 70348126 70348426 -129281724 - AluY SINE Alu -13 298 1 1132 189 88 101 chr5 70348426 70348494 -129281656 + MLT1E2 LTR MaLR 559 626 0 2050 143 0 0 chr5 70349496 70349789 -129280361 + AluSx SINE Alu 1 293 -19 222 118 0 0 chr5 70350305 70350339 -129279811 + (TG)n Simple_repeat Simple_repeat 2 35 0 204 67 0 0 chr5 70350381 70350411 -129279739 + (CA)n Simple_repeat Simple_repeat 2 31 0 1432 243 113 32 chr5 70351409 70351941 -129278209 + MER69 DNA AcHobo 68 642 -584 820 183 51 20 chr5 70351939 70352269 -129277881 + MER69 DNA AcHobo 2038 2444 -82 * 1015 133 13 7 chr5 70352377 70352527 -129277623 - AluSg/x SINE Alu -24 285 135 31 76 0 0 chr5 70352603 70352669 -129277481 + AT_rich Low_complexity Low_complexity 1 66 0 1131 143 0 0 chr5 70352740 70352915 -129277235 - L1PA16 LINE L1 -9 6157 5983 655 340 116 9 chr5 70352936 70353492 -129276658 - L1M4 LINE L1 -1319 4827 4215 224 360 90 0 chr5 70353492 70353592 -129276558 + L2 LINE L2 3163 3271 -1 2251 93 17 7 chr5 70353982 70354284 -129275866 + AluSx SINE Alu 1 305 -7 539 194 8 22 chr5 70355955 70356089 -129274061 - MER94 DNA DNA 0 134 3 1013 178 0 0 chr5 70356722 70356896 -129273254 - MER46A DNA MER2_type 0 236 63 23 0 0 0 chr5 70457258 70457281 -129172869 + AT_rich Low_complexity Low_complexity 1 23 0 201 39 0 0 chr5 70458072 70458098 -129172052 + (A)n Simple_repeat Simple_repeat 1 26 0 545 291 14 33 chr5 70459279 70459554 -129170596 - THE1C LTR MaLR -103 272 3 419 319 6 18 chr5 70460264 70460430 -129169720 + GA-rich Low_complexity Low_complexity 5 168 0 733 285 67 18 chr5 70461781 70462145 -129168005 + L1MC4a LINE L1 5499 5768 -394 38 39 0 0 chr5 70462208 70462260 -129167890 + AT_rich Low_complexity Low_complexity 1 52 0 1008 177 39 5 chr5 70462621 70462824 -129167326 + AluSq SINE Alu 1 210 -103 1710 130 59 0 chr5 70463139 70463378 -129166772 + AluJo SINE Alu 1 253 -59 327 281 18 30 chr5 70464292 70464459 -129165691 + GA-rich Low_complexity Low_complexity 3 167 0 269 220 22 44 chr5 70464774 70464865 -129165285 + L2 LINE L2 3142 3230 -42 370 339 0 8 chr5 70464997 70465115 -129165035 + L1MC4a LINE L1 5542 5658 -2150 1782 169 14 3 chr5 70465281 70465576 -129164574 + AluJb SINE Alu 1 298 -14 297 0 0 0 chr5 70466538 70466571 -129163579 + (TA)n Simple_repeat Simple_repeat 1 33 0 1185 185 4 41 chr5 70467996 70468266 -129161884 + AluJb SINE Alu 1 260 -52 514 165 0 52 chr5 70468661 70468758 -129161392 - MLT1C LTR MaLR -375 92 1 456 260 150 17 chr5 70468771 70468944 -129161206 + MIR SINE MIR 35 230 -32 563 259 30 6 chr5 70468965 70469131 -129161019 - L2 LINE L2 0 3313 3144 1571 158 40 14 chr5 70469133 70469411 -129160739 + AluJb SINE Alu 9 293 -19 2190 129 7 0 chr5 70470174 70470483 -129159667 + AluSx SINE Alu 1 311 -1 923 101 125 6 chr5 70470736 70470904 -129159246 - AluSg/x SINE Alu -11 301 114 221 266 8 28 chr5 70471532 70471622 -129158528 + GA-rich Low_complexity Low_complexity 1 88 0 1539 144 10 26 chr5 70473470 70473782 -129156368 - L1 LINE L1 -1417 4729 4423 1589 133 7 32 chr5 70473947 70474232 -129155918 + AluSx SINE Alu 35 312 0 694 100 37 227 chr5 70474234 70474440 -129155710 + MER45B DNA AcHobo 786 931 -650 396 226 137 0 chr5 70474440 70474542 -129155608 - FLAM_C SINE Alu -16 117 2 694 100 37 227 chr5 70474542 70474604 -129155546 + MER45B DNA AcHobo 931 1003 -37 210 71 0 0 chr5 70475454 70475482 -129154668 + (TTTC)n Simple_repeat Simple_repeat 4 31 0 213 39 0 0 chr5 70475623 70475649 -129154501 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 2025 151 0 3 chr5 70476274 70476586 -129153564 - AluSx SINE Alu -1 311 1 425 279 55 60 chr5 70476659 70476932 -129153218 + L1MC4a LINE L1 5675 5814 -428 625 82 0 0 chr5 70477610 70477695 -129152455 + AluY SINE Alu 213 297 -14 243 146 0 0 chr5 70478850 70478891 -129151259 + (T)n Simple_repeat Simple_repeat 1 41 0 580 163 0 0 chr5 70480496 70480588 -129149562 - AluSg/x SINE Alu -17 293 202 649 158 0 0 chr5 70480631 70480732 -129149418 - U13 snRNA snRNA 0 104 4 356 147 280 0 chr5 70480740 70480781 -129149369 + AluJo SINE Alu 84 112 -190 305 24 24 0 chr5 70480781 70480823 -129149327 + (TA)n Simple_repeat Simple_repeat 1 43 0 356 147 280 0 chr5 70480823 70480856 -129149294 + AluJo SINE Alu 112 179 -123 814 194 0 0 chr5 70480856 70480995 -129149155 - AluJo SINE Alu -173 139 1 211 160 180 0 chr5 70481115 70481165 -129148985 - L2 LINE L2 0 3313 3255 2379 61 0 45 chr5 70481167 70481477 -129148673 - AluY SINE Alu -15 296 1 2146 102 32 0 chr5 70481506 70481791 -129148359 + AluSg SINE Alu 1 294 -16 267 277 50 0 chr5 70482867 70482986 -129147164 - HAL1 LINE L1 -133 2374 2250 1709 178 78 0 chr5 70483285 70483606 -129146544 + MER7A DNA MER2_type 2 345 -1 2415 84 7 3 chr5 70483692 70484001 -129146149 - AluSx SINE Alu -2 310 1 2184 89 31 3 chr5 70484305 70484596 -129145554 - AluY SINE Alu -12 299 1 2273 94 3 7 chr5 70484869 70485177 -129144973 - AluSx SINE Alu -5 307 1 1327 194 43 36 chr5 70485450 70485729 -129144421 - AluJo SINE Alu -30 282 2 2104 122 0 7 chr5 70485785 70486088 -129144062 - AluY SINE Alu -10 301 1 4610 92 152 32 chr5 70486434 70487172 -129142978 - LTR12 LTR ERV1 0 826 1 2376 78 0 3 chr5 70487249 70487543 -129142607 + AluY SINE Alu 1 293 -18 2151 91 30 20 chr5 70487647 70487945 -129142205 - AluSc SINE Alu -8 301 1 2199 97 37 0 chr5 70487947 70488246 -129141904 - AluSp SINE Alu -3 310 1 1568 191 35 0 chr5 70488354 70488637 -129141513 + AluJb SINE Alu 1 293 -19 881 123 8 0 chr5 70488764 70488886 -129141264 + FLAM_C SINE Alu 11 133 -10 1672 143 0 70 chr5 70488890 70489191 -129140959 + AluJo SINE Alu 27 306 -6 1607 137 5 13 chr5 70489470 70489830 -129140320 + MER51A LTR ERV1 1 517 -117 2193 108 7 0 chr5 70489830 70490126 -129140024 - AluSx SINE Alu -14 298 1 2440 85 13 0 chr5 70490153 70490459 -129139691 - AluSg SINE Alu 0 310 1 903 113 0 0 chr5 70490530 70490663 -129139487 - MER50 LTR ERV1 -60 674 542 622 126 0 0 chr5 70490816 70490911 -129139239 - AluJ/FLAM SINE Alu -212 100 6 703 160 76 0 chr5 70490916 70491035 -129139115 + AluJo SINE Alu 24 151 -161 523 267 167 32 chr5 70491090 70491479 -129138671 - L1MC4a LINE L1 -118 7877 7263 327 254 35 0 chr5 70491507 70491621 -129138529 - L1MC4 LINE L1 -809 7233 7116 1948 149 0 0 chr5 70491662 70491944 -129138206 - AluSx SINE Alu -30 282 1 230 141 109 31 chr5 70492012 70492076 -129138074 + MER5A DNA MER1_type 3 71 -118 27 0 0 0 chr5 70492147 70492174 -129137976 + AT_rich Low_complexity Low_complexity 1 27 0 998 102 0 0 chr5 70492184 70492311 -129137839 - AluSq/x SINE Alu -179 133 7 1583 146 58 7 chr5 70492539 70492699 -129137451 - AluJo SINE Alu -15 297 116 201 39 0 0 chr5 70492699 70492725 -129137425 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1583 146 58 7 chr5 70492725 70492839 -129137311 - AluJo SINE Alu -196 116 9 2022 105 3 11 chr5 70492866 70493180 -129136970 - AluSg SINE Alu 0 312 1 2415 71 3 3 chr5 70493180 70493475 -129136675 - AluSx SINE Alu -15 297 2 267 294 71 22 chr5 70494650 70494834 -129135316 + MIR SINE MIR 46 238 -24 726 212 127 12 chr5 70495084 70495365 -129134785 + MER58 DNA MER1_type 19 2420 0 2246 82 0 39 chr5 70495406 70495712 -129134438 + AluSx SINE Alu 1 294 -18 2549 54 0 0 chr5 70496039 70496335 -129133815 + AluY SINE Alu 1 296 -15 22 0 0 0 chr5 70496477 70496499 -129133651 + AT_rich Low_complexity Low_complexity 1 22 0 1115 174 9 19 chr5 70496686 70496898 -129133252 - AluJb SINE Alu -3 309 100 222 309 124 0 chr5 70497054 70497151 -129132999 - L2 LINE L2 -208 3105 2997 638 245 7 14 chr5 70497338 70497477 -129132673 + AluJo SINE Alu 34 171 -141 230 143 0 0 chr5 70497481 70497516 -129132634 - Alu SINE Alu -73 229 195 252 265 0 20 chr5 70497607 70497623 -129132527 - L1MC4 LINE L1 -1333 6709 6694 2333 99 3 0 chr5 70497623 70497925 -129132225 + AluSp SINE Alu 1 303 -10 280 270 0 0 chr5 70497925 70498014 -129132136 + L1MC4 LINE L1 6615 6703 -1339 491 202 10 0 chr5 70498061 70498160 -129131990 - L1ME2 LINE L1 -27 6137 6038 1257 183 68 32 chr5 70498160 70498439 -129131711 + AluJo SINE Alu 1 289 -23 2192 95 36 10 chr5 70498458 70498762 -129131388 - AluSx SINE Alu 0 312 1 705 168 161 0 chr5 70498762 70498905 -129131245 - MER3 DNA MER1_type -30 179 14 1253 162 59 0 chr5 70498976 70499180 -129130970 - AluJb SINE Alu -19 293 78 631 171 193 35 chr5 70499181 70499409 -129130741 + MER33 DNA MER1_type 59 322 -2 1318 183 9 105 chr5 70499551 70499751 -129130399 - AluJo SINE Alu -1 301 144 2323 81 11 0 chr5 70499751 70500036 -129130114 + AluSp SINE Alu 1 288 -25 1318 183 9 105 chr5 70500036 70500168 -129129982 - AluJo SINE Alu -158 144 1 1591 153 17 31 chr5 70500737 70501025 -129129125 - AluJb SINE Alu -5 307 24 679 125 0 0 chr5 70501077 70501173 -129128977 - Tigger5 DNA MER2_type 0 2323 2228 2216 113 0 7 chr5 70501173 70501473 -129128677 + AluSx SINE Alu 1 298 -14 2392 35 0 0 chr5 70502341 70502623 -129127527 + L1PA4 LINE L1 5871 6152 -3 25 0 0 0 chr5 70502623 70502648 -129127502 + AT_rich Low_complexity Low_complexity 1 25 0 2532 56 7 0 chr5 70502724 70503027 -129127123 - AluY SINE Alu -6 305 1 1334 126 70 0 chr5 70503117 70503316 -129126834 - AluSg/x SINE Alu -18 294 82 1575 169 10 42 chr5 70503462 70503769 -129126381 + AluJo SINE Alu 5 301 -11 2978 106 49 33 chr5 70503827 70503985 -129126165 - LOR1a LTR ERV1 0 497 343 1847 149 14 3 chr5 70503985 70504288 -129125862 - AluJb SINE Alu 0 306 1 2978 106 49 33 chr5 70504288 70504617 -129125533 - LOR1a LTR ERV1 -154 343 1 2488 88 3 0 chr5 70504645 70504953 -129125197 + AluSx SINE Alu 1 309 -3 1055 141 179 88 chr5 70505004 70505344 -129124806 + MER93b LTR ERV1 1 371 -2 1931 103 0 12 chr5 70505533 70505785 -129124365 - AluSx SINE Alu -8 304 56 826 114 30 30 chr5 70505796 70505928 -129124222 - FLAM_C SINE Alu -1 132 1 277 283 33 11 chr5 70505928 70506020 -129124130 + MER5A DNA MER1_type 96 189 0 319 306 56 28 chr5 70506148 70506292 -129123858 + L2 LINE L2 3165 3312 -1 1654 124 0 81 chr5 70506308 70506388 -129123762 + L1MC1 LINE L1 6037 6122 -211 1740 174 3 0 chr5 70506388 70506670 -129123480 + AluJo SINE Alu 10 292 -20 1654 124 0 81 chr5 70506670 70506896 -129123254 + L1MC1 LINE L1 6122 6318 -15 1110 160 21 0 chr5 70507961 70508149 -129122001 - AluSx SINE Alu -1 311 120 21 0 0 0 chr5 70508151 70508172 -129121978 + AT_rich Low_complexity Low_complexity 1 21 0 2048 131 7 7 chr5 70508176 70508467 -129121683 - AluSx SINE Alu -21 291 1 1061 85 0 0 chr5 70508468 70508597 -129121553 - AluSx SINE Alu -177 135 7 416 111 37 0 chr5 70508781 70508889 -129121261 + (TA)n Simple_repeat Simple_repeat 1 112 0 1619 161 7 40 chr5 70509092 70509390 -129120760 - AluJo SINE Alu -24 288 1 2112 136 0 3 chr5 70509394 70509704 -129120446 - AluSg1 SINE Alu 0 309 1 2428 97 0 0 chr5 70509707 70510018 -129120132 - AluY SINE Alu 0 311 1 2035 118 13 7 chr5 70510022 70510328 -129119822 - AluSx SINE Alu -4 308 1 1374 150 20 158 chr5 70510328 70510504 -129119646 - AluJb SINE Alu -8 294 186 2543 65 0 3 chr5 70510504 70510810 -129119340 - AluY SINE Alu -6 305 1 1374 150 20 158 chr5 70510810 70510974 -129119176 - AluJb SINE Alu -116 186 1 2234 86 7 0 chr5 70510990 70511282 -129118868 - AluSp SINE Alu -19 294 1 1952 123 16 32 chr5 70511286 70511595 -129118555 - AluSq SINE Alu -9 304 1 614 164 64 18 chr5 70511691 70511801 -129118349 - FLAM_C SINE Alu -18 125 11 1754 106 14 45 chr5 70511993 70512285 -129117865 - AluSq SINE Alu -15 298 16 232 246 0 15 chr5 70512286 70512351 -129117799 + GA-rich Low_complexity Low_complexity 2 65 0 1078 128 17 17 chr5 70512804 70512976 -129117174 + AluSq SINE Alu 133 304 -9 2140 101 4 0 chr5 70513529 70513805 -129116345 - AluSq SINE Alu -36 277 1 2124 111 14 3 chr5 70513943 70514240 -129115910 - AluSx SINE Alu -11 301 2 2131 94 0 63 chr5 70514388 70514707 -129115443 + AluSg SINE Alu 2 300 -10 1978 124 16 7 chr5 70515140 70515446 -129114704 - AluSx SINE Alu -3 309 1 1814 171 0 7 chr5 70515683 70515982 -129114168 - AluSx SINE Alu -15 297 1 2024 139 3 19 chr5 70516039 70516356 -129113794 - AluSx SINE Alu 0 312 1 252 281 109 0 chr5 70516488 70516552 -129113598 - MLT1I LTR MaLR -142 267 197 712 193 0 15 chr5 70517013 70517148 -129113002 - FLAM_C SINE Alu 0 133 1 1927 136 13 23 chr5 70517413 70517573 -129112577 - AluSx SINE Alu -12 300 143 2201 107 0 32 chr5 70517573 70517881 -129112269 - AluSx SINE Alu -14 298 1 1927 136 13 23 chr5 70517881 70518021 -129112129 - AluSx SINE Alu -169 143 3 282 238 0 16 chr5 70518064 70518127 -129112023 + HERV16 LTR ERVL 1174 1235 -3761 945 178 25 0 chr5 70518178 70518335 -129111815 + FRAM SINE Alu 2 162 -14 2107 111 7 26 chr5 70518335 70518641 -129111509 + AluSq SINE Alu 3 302 -11 617 255 123 17 chr5 70521139 70521374 -129108776 - MIR SINE MIR 0 262 3 21 36 0 0 chr5 70521608 70521636 -129108514 + AT_rich Low_complexity Low_complexity 1 28 0 2101 91 44 0 chr5 70521789 70522063 -129108087 - AluSg SINE Alu -24 286 1 196 240 83 52 chr5 70522236 70522332 -129107818 + L2 LINE L2 2961 3059 -213 2206 119 3 0 chr5 70522363 70522656 -129107494 - AluSg SINE Alu -16 294 1 2151 112 0 59 chr5 70522665 70522987 -129107163 - AluSg SINE Alu -7 303 1 1462 196 31 0 chr5 70523369 70523624 -129106526 - AluJo SINE Alu -49 263 1 751 116 99 25 chr5 70523657 70523778 -129106372 - FLAM_C SINE Alu -3 130 1 1137 163 0 0 chr5 70524773 70524951 -129105199 - AluSg/x SINE Alu -1 311 134 2087 125 10 13 chr5 70524951 70525263 -129104887 - AluSx SINE Alu -1 311 1 2569 75 0 0 chr5 70525472 70525779 -129104371 - AluY SINE Alu -4 307 1 869 230 32 68 chr5 70525811 70526152 -129103998 - LTR47B LTR ERVL 0 443 123 2105 123 3 20 chr5 70526469 70526770 -129103380 - AluSx SINE Alu -11 301 6 1577 82 222 0 chr5 70527190 70527433 -129102717 + AluY SINE Alu 3 299 -2 567 174 0 0 chr5 70528395 70528487 -129101663 - AluSg/x SINE Alu -17 295 204 649 158 0 0 chr5 70528530 70528631 -129101519 - U13 snRNA snRNA 0 104 4 356 147 280 0 chr5 70528639 70528680 -129101470 + AluJo SINE Alu 84 112 -190 305 24 24 0 chr5 70528680 70528722 -129101428 + (TA)n Simple_repeat Simple_repeat 1 43 0 356 147 280 0 chr5 70528722 70528755 -129101395 + AluJo SINE Alu 112 179 -123 844 187 0 0 chr5 70528755 70528894 -129101256 - AluJo SINE Alu -173 139 1 211 160 180 0 chr5 70529014 70529064 -129101086 - L2 LINE L2 0 3313 3255 2334 62 3 45 chr5 70529066 70529375 -129100775 - AluY SINE Alu -15 296 1 1872 101 36 11 chr5 70529418 70529694 -129100456 + AluSg SINE Alu 12 294 -16 267 277 50 0 chr5 70530770 70530889 -129099261 - HAL1 LINE L1 -133 2374 2250 1709 178 78 0 chr5 70531188 70531509 -129098641 + MER7A DNA MER2_type 2 345 -1 2374 91 7 3 chr5 70531595 70531904 -129098246 - AluSx SINE Alu -2 310 1 2184 89 31 3 chr5 70532208 70532499 -129097651 - AluY SINE Alu -12 299 1 2298 91 3 7 chr5 70532773 70533081 -129097069 - AluSx SINE Alu -5 307 1 1334 194 43 36 chr5 70533354 70533633 -129096517 - AluJo SINE Alu -30 282 2 2104 122 0 7 chr5 70533689 70533992 -129096158 - AluY SINE Alu -10 301 1 4610 92 152 32 chr5 70534338 70535076 -129095074 - LTR12 LTR ERV1 0 826 1 2353 82 0 3 chr5 70535153 70535447 -129094703 + AluY SINE Alu 1 293 -18 2129 91 34 17 chr5 70535551 70535847 -129094303 - AluY SINE Alu -10 301 1 2181 96 36 3 chr5 70535849 70536151 -129093999 - AluSp SINE Alu -1 312 1 1568 191 35 0 chr5 70536259 70536542 -129093608 + AluJb SINE Alu 1 293 -19 881 123 8 0 chr5 70536668 70536790 -129093360 + FLAM_C SINE Alu 11 133 -10 1672 143 0 70 chr5 70536794 70537095 -129093055 + AluJo SINE Alu 27 306 -6 1607 134 5 13 chr5 70537374 70537734 -129092416 + MER51A LTR ERV1 1 517 -117 2193 108 7 0 chr5 70537734 70538030 -129092120 - AluSx SINE Alu -14 298 1 2398 92 13 0 chr5 70538057 70538362 -129091788 - AluSg SINE Alu -1 309 1 903 113 0 0 chr5 70538433 70538566 -129091584 - MER50 LTR ERV1 -60 674 542 622 126 0 0 chr5 70538719 70538814 -129091336 - AluJ/FLAM SINE Alu -212 100 6 703 160 76 0 chr5 70538819 70538938 -129091212 + AluJo SINE Alu 24 151 -161 523 267 167 32 chr5 70538991 70539380 -129090770 - L1MC4a LINE L1 -118 7877 7263 327 254 35 0 chr5 70539408 70539522 -129090628 - L1MC4 LINE L1 -809 7233 7116 1948 149 0 0 chr5 70539563 70539845 -129090305 - AluSx SINE Alu -30 282 1 319 206 15 0 chr5 70539913 70539981 -129090169 + MER5A DNA MER1_type 3 71 -118 27 0 0 0 chr5 70540054 70540081 -129090069 + AT_rich Low_complexity Low_complexity 1 27 0 998 102 0 0 chr5 70540091 70540218 -129089932 - AluSq/x SINE Alu -180 133 7 1467 149 27 60 chr5 70540448 70540749 -129089401 - AluJo SINE Alu -15 297 7 1202 113 6 17 chr5 70540796 70540998 -129089152 - AluSg/x SINE Alu 0 308 109 1076 85 7 0 chr5 70541000 70541141 -129089009 + AluSg/x SINE Alu 159 300 -10 2156 108 3 13 chr5 70541308 70541613 -129088537 - AluSx SINE Alu -10 302 1 709 163 23 31 chr5 70541701 70541830 -129088320 + FLAM_C SINE Alu 2 129 -4 3377 63 2 20 chr5 70542151 70542223 -129087927 + L1PA6 LINE L1 5712 5784 -370 1598 106 147 23 chr5 70542223 70542488 -129087662 + AluSp SINE Alu 3 300 -3 3377 63 2 20 chr5 70542488 70542860 -129087290 + L1PA6 LINE L1 5784 6148 -6 1558 103 0 93 chr5 70542886 70543000 -129087150 + L1MA4 LINE L1 6026 6149 -151 1807 133 47 33 chr5 70543000 70543300 -129086850 - AluSx SINE Alu -8 304 1 1958 155 7 7 chr5 70543300 70543597 -129086553 - AluJb SINE Alu -15 297 1 1558 103 0 93 chr5 70543597 70543783 -129086367 + L1MA4 LINE L1 6147 6299 -1 207 203 0 0 chr5 70543820 70543884 -129086266 + A-rich Low_complexity Low_complexity 1 64 0 431 185 50 50 chr5 70543888 70544007 -129086143 + AluJb SINE Alu 179 297 -15 1247 174 94 74 chr5 70544016 70544056 -129086094 + AluJo SINE Alu 1 39 -273 2470 79 3 0 chr5 70544056 70544360 -129085790 + AluSg SINE Alu 1 305 -5 270 0 0 0 chr5 70544360 70544390 -129085760 + (TA)n Simple_repeat Simple_repeat 2 31 0 1247 174 94 74 chr5 70544390 70544646 -129085504 + AluJo SINE Alu 38 304 -8 2704 135 84 42 chr5 70544647 70544969 -129085181 + L1MC1 LINE L1 5323 5679 -654 2489 74 0 0 chr5 70544969 70545280 -129084870 + AluY SINE Alu 1 311 0 2704 135 84 42 chr5 70545280 70545506 -129084644 + L1MC1 LINE L1 5679 5894 -439 398 136 0 0 chr5 70545508 70545567 -129084583 + AluS SINE Alu 2 60 -248 1194 165 119 4 chr5 70545570 70545806 -129084344 + L1MC1 LINE L1 6070 6332 -1 2483 63 0 0 chr5 70545816 70546118 -129084032 + AluY SINE Alu 1 302 -9 276 229 18 64 chr5 70546669 70546778 -129083372 + L1MC4 LINE L1 7939 8042 0 631 254 119 17 chr5 70548765 70549001 -129081149 - MIR SINE MIR 0 262 3 21 36 0 0 chr5 70549235 70549263 -129080887 + AT_rich Low_complexity Low_complexity 1 28 0 2063 93 44 0 chr5 70549420 70549690 -129080460 - AluSg SINE Alu -28 282 1 196 240 83 52 chr5 70549863 70549959 -129080191 + L2 LINE L2 2961 3059 -213 2237 116 3 0 chr5 70549990 70550283 -129079867 - AluSg SINE Alu -16 294 1 2151 112 0 59 chr5 70550292 70550614 -129079536 - AluSg SINE Alu -7 303 1 1450 196 31 0 chr5 70550996 70551251 -129078899 - AluJo SINE Alu -49 263 1 751 116 99 25 chr5 70551284 70551405 -129078745 - FLAM_C SINE Alu -3 130 1 1137 163 0 0 chr5 70552400 70552578 -129077572 - AluSg/x SINE Alu -1 311 134 2093 125 10 13 chr5 70552578 70552890 -129077260 - AluSx SINE Alu -1 311 1 358 231 75 52 chr5 70552890 70553024 -129077126 - L1MC4 LINE L1 -280 7762 7626 2310 82 10 3 chr5 70553169 70553472 -129076678 + AluSp SINE Alu 1 305 -8 1782 69 17 79 chr5 70554273 70554564 -129075586 - AluSc SINE Alu -36 273 1 339 239 198 0 chr5 70554634 70554801 -129075349 - L2 LINE L2 0 3313 3114 500 267 7 7 chr5 70554851 70554986 -129075164 - MIR SINE MIR -98 164 30 209 226 21 118 chr5 70555141 70555234 -129074916 - L2 LINE L2 -349 2964 2881 281 296 176 19 chr5 70555263 70555422 -129074728 - L2 LINE L2 -552 2762 2579 1555 133 28 8 chr5 70555586 70555834 -129074316 - AluJo SINE Alu -19 293 41 385 146 90 67 chr5 70555845 70555934 -129074216 - AluSp SINE Alu -83 220 130 1325 108 114 114 chr5 70556186 70556483 -129073667 + AluSq SINE Alu 1 297 -16 459 143 29 0 chr5 70556495 70556594 -129073556 + AluSp/q SINE Alu 214 314 0 685 188 0 23 chr5 70558228 70558361 -129071789 + FLAM_C SINE Alu 1 130 -3 2375 96 0 0 chr5 70558371 70558663 -129071487 - AluSx SINE Alu -20 292 1 24 53 0 0 chr5 70558663 70558701 -129071449 + AT_rich Low_complexity Low_complexity 1 38 0 954 173 103 130 chr5 70558765 70559066 -129071084 - AluSx SINE Alu -8 294 2 4195 147 21 36 chr5 70559159 70559636 -129070514 - L1PA16 LINE L1 -3 6163 5680 2015 92 38 17 chr5 70559636 70559813 -129070337 - AluSx SINE Alu -1 311 124 261 0 0 0 chr5 70559813 70559842 -129070308 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2015 92 38 17 chr5 70559842 70559957 -129070193 - AluSx SINE Alu -188 124 13 2350 119 0 0 chr5 70559963 70560273 -129069877 - AluSx SINE Alu -2 310 1 4195 147 21 36 chr5 70560273 70560555 -129069595 - L1PA16 LINE L1 -491 5675 5409 624 252 55 67 chr5 70560555 70560728 -129069422 - HAL1 LINE L1 -325 2182 2013 2514 78 0 0 chr5 70560728 70561037 -129069113 - AluSc SINE Alu 0 309 1 624 252 55 67 chr5 70561037 70561208 -129068942 - HAL1 LINE L1 -494 2013 1842 * 16351 138 16 62 chr5 70561201 70561495 -129068655 - L1M1 LINE L1 -546 7178 6872 1901 141 0 0 chr5 70561495 70561798 -129068352 - AluSx SINE Alu 0 316 14 16351 138 16 62 chr5 70561798 70562951 -129067199 - L1M1 LINE L1 -852 6872 5668 2119 126 20 0 chr5 70562951 70563245 -129066905 + AluSx SINE Alu 1 300 -12 2305 117 0 0 chr5 70563247 70563547 -129066603 + AluSx SINE Alu 1 300 -12 16351 138 16 62 chr5 70563547 70563565 -129066585 - L1M1 LINE L1 -2057 5667 5650 733 175 0 29 chr5 70563565 70563702 -129066448 - FLAM_C SINE Alu -9 134 2 16351 138 16 62 chr5 70563702 70564016 -129066134 - L1M1 LINE L1 -2074 5650 5323 2366 93 0 10 chr5 70564016 70564318 -129065832 - AluSq SINE Alu -14 299 1 16351 138 16 62 chr5 70564318 70564399 -129065751 - L1M1 LINE L1 -2401 5323 5240 2527 80 0 0 chr5 70564399 70564701 -129065449 - AluY SINE Alu -9 302 1 16351 138 16 62 chr5 70564701 70565609 -129064541 - L1M1 LINE L1 -2484 5240 4292 249 33 0 0 chr5 70565609 70565639 -129064511 + (TA)n Simple_repeat Simple_repeat 1 30 0 16351 138 16 62 chr5 70565639 70565662 -129064488 - L1M1 LINE L1 -3432 4292 4269 2340 104 0 0 chr5 70565662 70565961 -129064189 - AluSc SINE Alu -10 299 1 16351 138 16 62 chr5 70565961 70566141 -129064009 - L1M1 LINE L1 -3455 4269 4082 2550 82 0 0 chr5 70566141 70566447 -129063703 - AluSq SINE Alu -6 307 2 16351 138 16 62 chr5 70566447 70566938 -129063212 - L1M1 LINE L1 -3642 4082 3570 2200 98 0 11 chr5 70566938 70567260 -129062890 - AluSx SINE Alu 0 319 1 16351 138 16 62 chr5 70567260 70567773 -129062377 - L1M1 LINE L1 -4154 3570 3035 2504 73 0 0 chr5 70567773 70568076 -129062074 + AluY SINE Alu 1 303 -8 16351 138 16 62 chr5 70568076 70568304 -129061846 - L1M1 LINE L1 -4689 3035 2798 1895 172 0 7 chr5 70568304 70568612 -129061538 - AluJo SINE Alu -4 308 3 16351 138 16 62 chr5 70568612 70569066 -129061084 - L1M1 LINE L1 -4926 2798 2325 2477 84 0 25 chr5 70569066 70569387 -129060763 - AluSq SINE Alu 0 313 1 16351 138 16 62 chr5 70569387 70569551 -129060599 - L1M1 LINE L1 -5399 2325 2155 2620 64 0 0 chr5 70569551 70569862 -129060288 - AluY SINE Alu 0 311 1 16351 138 16 62 chr5 70569862 70570101 -129060049 - L1M1 LINE L1 -5569 2155 1907 2049 127 0 25 chr5 70570101 70570416 -129059734 + AluSx SINE Alu 1 307 -5 16351 138 16 62 chr5 70570416 70571570 -129058580 - L1M1 LINE L1 -5817 1907 1099 719 113 35 9 chr5 70571567 70571682 -129058468 - L1M1 LINE L1 -7432 133 16 * 2119 117 7 0 chr5 70571710 70572029 -129058121 + AluSx SINE Alu 1 321 0 1928 119 32 7 chr5 70572035 70572312 -129057838 + AluSg SINE Alu 3 286 -24 1789 176 24 0 chr5 70572330 70572626 -129057524 + AluJo SINE Alu 1 303 -9 2220 75 0 34 chr5 70572633 70572925 -129057225 + AluY SINE Alu 14 295 -16 1833 156 0 3 chr5 70572935 70573217 -129056933 + AluJb SINE Alu 1 281 -31 246 143 0 0 chr5 70573239 70573274 -129056876 - L1M1 LINE L1 -5649 1916 1882 302 273 0 15 chr5 70573286 70573352 -129056798 + AluSg/x SINE Alu 125 189 -113 588 259 0 0 chr5 70573370 70573478 -129056672 + FLAM_A SINE Alu 1 108 -34 243 0 0 0 chr5 70573478 70573505 -129056645 + (TC)n Simple_repeat Simple_repeat 1 27 0 967 267 100 50 chr5 70573516 70573917 -129056233 - HAL1 LINE L1 -1705 802 382 29 28 0 0 chr5 70573931 70573967 -129056183 + AT_rich Low_complexity Low_complexity 1 36 0 1958 122 51 10 chr5 70574007 70574302 -129055848 - AluJb SINE Alu -5 307 1 439 289 113 8 chr5 70574383 70574639 -129055511 + L2 LINE L2 1980 2262 -1052 1335 152 0 19 chr5 70574675 70574885 -129055265 - AluJo SINE Alu -22 290 85 2578 80 0 0 chr5 70574929 70575241 -129054909 - AluSx SINE Alu 0 312 1 298 296 91 15 chr5 70575244 70575443 -129054707 + L2 LINE L2 2355 2568 -746 1754 148 0 30 chr5 70575547 70575817 -129054333 - AluJb SINE Alu -50 262 1 507 107 12 0 chr5 70575886 70575970 -129054180 - L1PA16 LINE L1 0 6166 6082 782 322 128 5 chr5 70575974 70576499 -129053651 + L2 LINE L2 2700 3286 -27 2311 96 3 7 chr5 70576561 70576891 -129053259 - AluSx SINE Alu 0 312 1 986 154 63 99 chr5 70577012 70577233 -129052917 - MER20 DNA MER1_type -5 214 2 2351 104 0 0 chr5 70577250 70577558 -129052592 + AluSx SINE Alu 1 308 -4 2073 115 17 0 chr5 70577966 70578254 -129051896 + AluSx SINE Alu 1 293 -19 2136 135 0 0 chr5 70578326 70578623 -129051527 + AluSx SINE Alu 1 297 -15 25 0 0 0 chr5 70578647 70578672 -129051478 + AT_rich Low_complexity Low_complexity 1 25 0 2228 99 3 3 chr5 70578681 70578973 -129051177 + AluSq SINE Alu 1 292 -21 1399 178 0 0 chr5 70579080 70579311 -129050839 + AluJb SINE Alu 82 312 0 1324 127 10 15 chr5 70579379 70579576 -129050574 - AluJo SINE Alu -116 196 1 2407 93 0 0 chr5 70580055 70580357 -129049793 + AluSc SINE Alu 1 302 -7 758 171 8 0 chr5 70581015 70581138 -129049012 + FLAM_C SINE Alu 2 125 -18 23 0 0 0 chr5 70581188 70581211 -129048939 + AT_rich Low_complexity Low_complexity 1 23 0 809 86 0 71 chr5 70581223 70581363 -129048787 + AluSg SINE Alu 1 130 -180 208 216 38 81 chr5 70581547 70581732 -129048418 + A-rich Low_complexity Low_complexity 3 179 0 2016 107 4 11 chr5 70581986 70582266 -129047884 - AluSg SINE Alu -32 278 1 21 0 0 0 chr5 70582278 70582299 -129047851 + AT_rich Low_complexity Low_complexity 1 21 0 826 168 0 0 chr5 70582349 70582474 -129047676 - FLAM_C SINE Alu -18 125 1 2407 93 0 0 chr5 70583132 70583434 -129046716 - AluSc SINE Alu -7 302 1 1324 127 10 15 chr5 70583913 70584110 -129046040 + AluJo SINE Alu 1 196 -116 1426 173 0 0 chr5 70584178 70584409 -129045741 - AluJb SINE Alu 0 312 82 2213 109 0 3 chr5 70584516 70584809 -129045341 - AluSq SINE Alu -21 292 1 24 0 0 0 chr5 70584818 70584842 -129045308 + AT_rich Low_complexity Low_complexity 1 24 0 2468 78 0 0 chr5 70584866 70585162 -129044988 - AluY SINE Alu -15 296 1 869 230 32 68 chr5 70585194 70585535 -129044615 - LTR47B LTR ERVL 0 443 123 2082 126 3 20 chr5 70585852 70586153 -129043997 - AluSx SINE Alu -11 301 6 1565 86 222 0 chr5 70586573 70586816 -129043334 + AluY SINE Alu 3 299 -2 566 193 133 18 chr5 70587573 70587739 -129042411 + LTR16A1 LTR ERVL 273 457 0 284 213 0 0 chr5 70587887 70587948 -129042202 - L1ME LINE L1 -303 5818 5758 2067 122 27 0 chr5 70588518 70588644 -129041506 + AluSx SINE Alu 1 122 -190 234 0 0 0 chr5 70588644 70588670 -129041480 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 2067 122 27 0 chr5 70588670 70588838 -129041312 + AluSx SINE Alu 122 303 -9 255 257 97 53 chr5 70588896 70589009 -129041141 + LTR67 LTR ERVL 16 133 -424 648 241 50 131 chr5 70589247 70589349 -129040801 + L1MC4a LINE L1 5380 5489 -2319 2084 105 14 0 chr5 70589349 70589645 -129040505 + L1MA2 LINE L1 6002 6301 -3 648 241 50 131 chr5 70589645 70589846 -129040304 + L1MC4a LINE L1 5489 5705 -2103 2004 130 3 38 chr5 70589846 70590162 -129039988 + AluSx SINE Alu 1 305 -7 648 241 50 131 chr5 70590162 70590176 -129039974 + L1MC4a LINE L1 5705 5719 -2089 1001 218 51 14 chr5 70590176 70590392 -129039758 - MER58A DNA MER1_type 0 224 1 648 241 50 131 chr5 70590392 70590636 -129039514 + L1MC4a LINE L1 5719 5897 -1911 383 278 16 8 chr5 70590999 70591125 -129039025 + MIR SINE MIR 21 147 -61 244 247 55 14 chr5 70591170 70591243 -129038907 + MIR3 SINE MIR 92 167 -41 1561 132 82 4 chr5 70591792 70592049 -129038101 - AluJb SINE Alu -1 311 35 2408 42 59 0 chr5 70592581 70592870 -129037280 + AluY SINE Alu 1 306 -5 2058 112 48 3 chr5 70592988 70593283 -129036867 + AluSg SINE Alu 1 308 -2 3472 125 13 15 chr5 70593520 70594048 -129036102 - MER1A DNA MER1_type 0 527 1 2193 91 0 18 chr5 70594085 70594399 -129035751 - AluY SINE Alu 0 309 1 774 301 28 19 chr5 70594496 70594855 -129035295 - L1ME3A LINE L1 -342 5828 5552 693 188 0 36 chr5 70594859 70594997 -129035153 + FLAM_C SINE Alu 6 138 -5 548 236 113 2 chr5 70595067 70595297 -129034853 - L1ME3A LINE L1 -688 5482 5232 274 202 29 58 chr5 70595594 70595698 -129034452 - LTR33 LTR ERVL -24 497 397 648 267 174 28 chr5 70595727 70596015 -129034135 - LTR33 LTR ERVL -189 332 3 1897 138 47 0 chr5 70596105 70596381 -129033769 + AluSx SINE Alu 3 291 -21 462 304 264 6 chr5 70596897 70597219 -129032931 + L3 LINE CR1 436 840 -737 2424 67 3 22 chr5 70597247 70597561 -129032589 + AluSp SINE Alu 3 310 -3 267 244 73 73 chr5 70597609 70597773 -129032377 + HAL1 LINE L1 37 200 -2307 454 327 56 0 chr5 70597932 70598094 -129032056 + L3 LINE CR1 1405 1575 -2 26 0 0 0 chr5 70598569 70598595 -129031555 + AT_rich Low_complexity Low_complexity 1 26 0 2096 108 10 26 chr5 70599141 70599448 -129030702 - AluSq SINE Alu -11 302 1 186 43 0 0 chr5 70599560 70599583 -129030567 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4878 91 28 10 chr5 70600271 70600950 -129029200 - LTR8 LTR ERV1 0 691 1 1933 93 26 84 chr5 70601080 70601391 -129028759 + AluSq SINE Alu 7 299 -14 213 111 0 0 chr5 70601497 70601524 -129028626 + (A)n Simple_repeat Simple_repeat 1 27 0 384 195 39 13 chr5 70601572 70601649 -129028501 - MLT1A2 LTR MaLR -11 363 285 758 201 35 85 chr5 70602033 70602095 -129028055 - MER5A DNA MER1_type 0 189 125 2092 122 23 10 chr5 70602095 70602399 -129027751 + AluSx SINE Alu 4 311 -1 758 201 35 85 chr5 70602399 70602535 -129027615 - MER5A DNA MER1_type -64 125 1 225 174 109 0 chr5 70602635 70602681 -129027469 + MER5A DNA MER1_type 139 189 0 268 261 0 58 chr5 70602955 70603024 -129027126 - L2 LINE L2 -7 3265 3201 2259 100 3 3 chr5 70603814 70604103 -129026047 + AluSq SINE Alu 1 289 -24 216 0 0 0 chr5 70604129 70604153 -129025997 + (TTG)n Simple_repeat Simple_repeat 1 24 0 252 241 71 71 chr5 70604219 70604360 -129025790 - L2 LINE L2 0 3313 3173 2383 226 41 88 chr5 70604904 70605353 -129024797 + L1ME2 LINE L1 5214 5682 -482 1553 174 3 28 chr5 70605353 70605635 -129024515 + AluJo SINE Alu 1 275 -37 2383 226 41 88 chr5 70605635 70606005 -129024145 + L1ME2 LINE L1 5682 5982 -182 2054 150 2 74 chr5 70606005 70606159 -129023991 + MLT1A1 LTR MaLR 1 164 -201 1955 128 32 3 chr5 70606159 70606441 -129023709 + AluJb SINE Alu 1 290 -22 2054 150 2 74 chr5 70606441 70606679 -129023471 + MLT1A1 LTR MaLR 164 365 0 2383 226 41 88 chr5 70606679 70606845 -129023305 + L1ME2 LINE L1 5982 6154 -10 2183 106 3 0 chr5 70607239 70607545 -129022605 - AluSx SINE Alu 0 307 1 300 302 33 71 chr5 70607746 70607958 -129022192 + MIR3 SINE MIR 2 205 -3 265 93 0 0 chr5 70608181 70608215 -129021935 + AluJ/FRAM SINE Alu 221 253 -49 2239 101 0 35 chr5 70608274 70608591 -129021559 + AluSg SINE Alu 1 306 -4 1853 156 3 10 chr5 70608758 70609059 -129021091 - AluJo SINE Alu -13 299 1 634 292 216 16 chr5 70609117 70609487 -129020663 - LTR16A LTR ERVL -5 445 2 2398 86 0 10 chr5 70610009 70610313 -129019837 + AluSg SINE Alu 3 303 -7 1945 163 7 0 chr5 70610364 70610742 -129019408 + AluSx SINE Alu 3 382 0 2229 120 3 0 chr5 70610809 70611108 -129019042 + AluSx SINE Alu 1 300 -12 16652 147 22 24 chr5 70611116 70611307 -129018843 - L1MA3 LINE L1 -6 7713 7523 2176 125 0 7 chr5 70611307 70611611 -129018539 - AluSq SINE Alu -11 302 1 16652 147 22 24 chr5 70611611 70611637 -129018513 - L1MA3 LINE L1 -196 7523 7498 2271 100 3 0 chr5 70611637 70611926 -129018224 + AluSp SINE Alu 1 290 -23 16652 147 22 24 chr5 70611926 70612263 -129017887 - L1MA3 LINE L1 -221 7498 7162 2342 90 0 3 chr5 70612263 70612563 -129017587 + AluSg1 SINE Alu 1 299 -10 1722 104 96 4 chr5 70612567 70612842 -129017308 + AluSc SINE Alu 7 304 0 16652 147 22 24 chr5 70612842 70615511 -129014639 - L1MA3 LINE L1 -560 7159 4487 2427 111 0 29 chr5 70615511 70615855 -129014295 - MER1B DNA MER1_type 0 337 4 16652 147 22 24 chr5 70615855 70617024 -129013126 - L1MA3 LINE L1 -3232 4487 3316 2340 98 3 3 chr5 70617024 70617329 -129012821 + AluSp SINE Alu 1 305 -8 16652 147 22 24 chr5 70617329 70617439 -129012711 - L1MA3 LINE L1 -4403 3316 3207 11363 31 5 71 chr5 70617458 70619029 -129011121 - SVA Other Other -1285 1382 1 1956 156 6 16 chr5 70619064 70619379 -129010771 - AluSx SINE Alu 0 312 1 2340 95 0 7 chr5 70619391 70619695 -129010455 - AluSg SINE Alu -8 302 1 2099 98 0 45 chr5 70619699 70619883 -129010267 - L1MA3 LINE L1 -4342 3223 3058 1868 136 0 4 chr5 70619883 70620169 -129009981 - AluSx SINE Alu 0 305 21 2099 98 0 45 chr5 70620169 70620319 -129009831 - L1MA3 LINE L1 -4507 3058 2903 882 264 79 53 chr5 70620319 70620878 -129009272 - L1ME LINE L1 -452 5710 5133 2121 94 31 3 chr5 70620881 70621169 -129008981 - AluSq SINE Alu -17 296 1 21 0 0 0 chr5 70621306 70621327 -129008823 + AT_rich Low_complexity Low_complexity 1 21 0 2031 153 0 7 chr5 70621348 70621656 -129008494 - AluSx SINE Alu -6 306 1 490 243 98 71 chr5 70621703 70621869 -129008281 - L1ME LINE L1 -1170 4976 4816 318 50 0 0 chr5 70621869 70621909 -129008241 + (CA)n Simple_repeat Simple_repeat 1 40 0 490 243 98 71 chr5 70621909 70621923 -129008227 - L1ME LINE L1 -1330 4816 4804 2106 100 9 81 chr5 70621923 70622243 -129007907 - AluSx SINE Alu -15 297 1 490 243 98 71 chr5 70622243 70622386 -129007764 - L1ME LINE L1 -1342 4804 4643 2473 80 3 0 chr5 70622798 70623100 -129007050 - AluSc SINE Alu -5 304 2 2384 51 7 7 chr5 70623298 70623591 -129006559 + AluY SINE Alu 2 294 -17 2473 68 3 13 chr5 70623765 70624076 -129006074 + AluSq SINE Alu 1 308 -5 550 225 19 86 chr5 70624521 70624730 -129005420 - L1ME LINE L1 -1489 4657 4463 1936 153 6 31 chr5 70624737 70625057 -129005093 - AluJb SINE Alu 0 312 1 1299 146 5 19 chr5 70625115 70625328 -129004822 - L1PA15 LINE L1 -2 6163 5954 962 166 11 0 chr5 70625332 70625507 -129004643 - L1M4 LINE L1 -944 5202 5026 338 167 0 17 chr5 70625510 70625570 -129004580 + MLT1A1 LTR MaLR 4 62 -303 2128 160 27 15 chr5 70625580 70625917 -129004233 - MER2 DNA MER2_type -1 343 3 276 77 0 0 chr5 70625917 70625956 -129004194 + (TATATG)n Simple_repeat Simple_repeat 6 44 0 1846 141 7 30 chr5 70626320 70626484 -129003666 - AluSx SINE Alu -12 300 145 2297 103 0 31 chr5 70626484 70626805 -129003345 - AluSx SINE Alu -1 311 1 1846 141 7 30 chr5 70626805 70626945 -129003205 - AluSx SINE Alu -167 145 3 890 191 25 0 chr5 70627101 70627258 -129002892 + FRAM SINE Alu 2 162 -14 2270 78 7 3 chr5 70627258 70627542 -129002608 + AluY SINE Alu 3 287 -24 2854 177 39 52 chr5 70627593 70628141 -129002009 + MLT1A1-int LTR MaLR 1141 1682 -53 1912 139 3 20 chr5 70628141 70628444 -129001706 - AluSx SINE Alu -11 301 4 2854 177 39 52 chr5 70628444 70628493 -129001657 + MLT1A1-int LTR MaLR 1682 1730 -5 1194 196 55 115 chr5 70628499 70628638 -129001512 + MLT1A1 LTR MaLR 2 148 -217 2217 117 7 0 chr5 70628638 70628937 -129001213 + AluSx SINE Alu 1 301 -11 1194 196 55 115 chr5 70628937 70629180 -129000970 + MLT1A1 LTR MaLR 148 361 -4 1063 211 64 0 chr5 70629185 70629451 -129000699 + L1M4 LINE L1 2635 2917 -3229 2221 105 3 0 chr5 70629474 70629770 -129000380 + AluSx SINE Alu 1 297 -15 2330 84 0 7 chr5 70629775 70630072 -129000078 + AluY SINE Alu 1 295 -16 1852 167 86 3 chr5 70630077 70630425 -128999725 + L1MB2 LINE L1 5755 6131 -40 2234 111 0 0 chr5 70630425 70630723 -128999427 + AluSx SINE Alu 1 298 -14 180 0 0 0 chr5 70630728 70630748 -128999402 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2308 82 3 0 chr5 70630923 70631217 -128998933 - AluSx SINE Alu -17 295 1 318 115 0 0 chr5 70632508 70632560 -128997590 + (TG)n Simple_repeat Simple_repeat 2 53 0 1366 213 142 12 chr5 70632986 70633397 -128996753 + L1ME LINE L1 5243 5704 -460 608 200 0 0 chr5 70633797 70633902 -128996248 + FRAM SINE Alu 59 163 -13 1752 181 13 3 chr5 70634008 70634307 -128995843 + AluJo SINE Alu 1 302 -10 1667 173 16 39 chr5 70634434 70634561 -128995589 + AluJo SINE Alu 1 129 -183 4547 78 62 51 chr5 70634561 70635268 -128994882 + SVA Other Other 672 1386 0 1667 173 16 39 chr5 70635268 70635452 -128994698 + AluJo SINE Alu 129 305 -7 1795 182 53 50 chr5 70635546 70635947 -128994203 + L1M4 LINE L1 4844 5242 -927 2206 98 40 0 chr5 70635947 70636243 -128993907 + AluSx SINE Alu 1 308 -4 1795 182 53 50 chr5 70636243 70636337 -128993813 + L1M4 LINE L1 5242 5358 -811 1726 133 0 65 chr5 70636337 70636616 -128993534 + AluJb SINE Alu 35 295 -17 1795 182 53 50 chr5 70636616 70636645 -128993505 + L1M4 LINE L1 5358 5385 -784 2396 100 0 0 chr5 70636683 70636983 -128993167 + AluSx SINE Alu 1 300 -12 465 172 18 31 chr5 70636993 70637107 -128993043 - L1MC1 LINE L1 -382 5951 5835 1871 163 0 10 chr5 70637146 70637446 -128992704 - AluJb SINE Alu -11 301 5 234 225 42 0 chr5 70637457 70637528 -128992622 + L1MC5 LINE L1 7609 7682 -279 1818 159 7 17 chr5 70637610 70637906 -128992244 - AluJb SINE Alu -19 293 1 2426 59 3 0 chr5 70638125 70638414 -128991736 - AluY SINE Alu -21 290 1 1823 154 28 3 chr5 70638470 70638755 -128991395 + AluJb SINE Alu 1 292 -20 2213 127 0 3 chr5 70638832 70639139 -128991011 - AluSx SINE Alu -6 306 1 682 163 101 23 chr5 70639771 70639900 -128990250 - FLAM_C SINE Alu -3 140 2 1918 113 35 7 chr5 70639999 70640282 -128989868 - AluSg1 SINE Alu -18 291 1 2366 90 0 10 chr5 70640282 70640592 -128989558 - AluSc SINE Alu -1 308 1 1953 92 96 4 chr5 70640991 70641263 -128988887 + AluSg SINE Alu 1 297 -13 327 224 69 86 chr5 70641263 70641322 -128988828 + L1ME4a LINE L1 5948 6006 -115 2177 122 0 0 chr5 70641322 70641617 -128988533 + AluSx SINE Alu 1 295 -17 327 224 69 86 chr5 70641617 70641731 -128988419 + L1ME4a LINE L1 6006 6118 -3 733 184 24 65 chr5 70641826 70641994 -128988156 + AluSp SINE Alu 137 297 -16 1894 99 0 25 chr5 70642008 70642292 -128987858 + AluSc SINE Alu 2 278 -31 1681 158 0 50 chr5 70642339 70642485 -128987665 - AluSx SINE Alu -24 288 136 2166 112 3 10 chr5 70642485 70642788 -128987362 - AluSg SINE Alu -9 301 1 2330 87 0 35 chr5 70642791 70643103 -128987047 - AluSg SINE Alu -9 301 1 1681 158 0 50 chr5 70643103 70643255 -128986895 - AluSx SINE Alu -178 134 1 2245 81 3 10 chr5 70643789 70644087 -128986063 + AluSx SINE Alu 1 296 -16 1989 124 7 7 chr5 70644099 70644397 -128985753 - AluSx SINE Alu -14 298 1 200 194 0 0 chr5 70644585 70644621 -128985529 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 678 168 7 88 chr5 70645055 70645192 -128984958 + FLAM_A SINE Alu 1 126 -7 588 144 10 0 chr5 70645813 70645910 -128984240 + Charlie1 DNA MER1_type 2659 2756 -5 2362 85 9 28 chr5 70645961 70646278 -128983872 + AluSq SINE Alu 1 311 -2 1854 156 10 7 chr5 70647652 70647953 -128982197 + AluSx SINE Alu 1 302 -10 26 0 0 0 chr5 70647966 70647992 -128982158 + AT_rich Low_complexity Low_complexity 1 26 0 2326 90 0 0 chr5 70647992 70648280 -128981870 + AluSg SINE Alu 2 289 -21 2232 92 0 33 chr5 70648325 70648628 -128981522 + AluSq SINE Alu 1 293 -20 2142 212 101 0 chr5 70649046 70649531 -128980619 - MLT1F LTR MaLR -8 534 1 2100 113 10 13 chr5 70649830 70650141 -128980009 - AluSq SINE Alu 0 313 4 593 263 122 33 chr5 70650312 70650525 -128979625 - MIR SINE MIR -1 261 30 2039 117 7 3 chr5 70650623 70650921 -128979229 + AluSx SINE Alu 1 299 -13 588 234 39 39 chr5 70650997 70651151 -128978999 + L2 LINE L2 2604 2757 -557 425 263 143 44 chr5 70651122 70651373 -128978777 + L2 LINE L2 3016 3291 -22 * 308 233 89 0 chr5 70651534 70651624 -128978526 - MIR SINE MIR -47 215 118 2321 91 0 7 chr5 70653182 70653480 -128976670 + AluSc SINE Alu 1 296 -13 525 281 44 0 chr5 70653508 70653668 -128976482 - MIR SINE MIR -56 206 40 212 100 0 60 chr5 70653890 70653940 -128976210 + (A)n Simple_repeat Simple_repeat 1 47 0 6077 114 39 24 chr5 70653941 70654358 -128975792 + L1M1 LINE L1 2631 3040 -4525 1880 172 0 7 chr5 70654358 70654666 -128975484 + AluJo SINE Alu 3 308 -4 6077 114 39 24 chr5 70654666 70654894 -128975256 + L1M1 LINE L1 3040 3263 -4302 2495 75 0 0 chr5 70654894 70655201 -128974949 - AluY SINE Alu -4 307 1 6077 114 39 24 chr5 70655201 70655715 -128974435 + L1M1 LINE L1 3263 3808 -3757 2006 97 23 53 chr5 70655715 70656014 -128974136 + AluSx SINE Alu 1 290 -22 750 234 97 48 chr5 70656017 70656286 -128973864 + L1MC4 LINE L1 7758 8039 -3 1376 180 13 4 chr5 70656660 70656893 -128973257 + AluJb SINE Alu 44 278 -34 234 149 0 45 chr5 70657025 70657041 -128973109 + (TTCC)n Simple_repeat Simple_repeat 1 16 -48 2660 45 0 0 chr5 70657041 70657352 -128972798 - AluY SINE Alu 0 311 1 234 149 0 45 chr5 70657352 70657402 -128972748 + (TTCC)n Simple_repeat Simple_repeat 16 64 0 960 243 0 11 chr5 70657409 70657598 -128972552 - AluJo SINE Alu -18 294 108 1064 191 6 0 chr5 70657598 70657776 -128972374 - AluJo SINE Alu -133 179 1 713 161 129 16 chr5 70657944 70658068 -128972082 - AluJo SINE Alu -173 139 2 1505 93 9 37 chr5 70658176 70658391 -128971759 + AluSq SINE Alu 2 210 -103 190 250 62 0 chr5 70658541 70658589 -128971561 - L2 LINE L2 -4 3309 3259 573 236 193 0 chr5 70658614 70658775 -128971375 + MIR SINE MIR 61 252 -10 722 254 90 27 chr5 70659137 70659393 -128970757 - L1MC4 LINE L1 -3 8039 7768 303 234 148 23 chr5 70659464 70659592 -128970558 - HAL1 LINE L1 -2115 392 249 2013 122 25 0 chr5 70659920 70660199 -128969951 - AluSx SINE Alu -26 286 1 1118 152 91 33 chr5 70660207 70660417 -128969733 - AluJb SINE Alu -26 286 65 969 82 0 44 chr5 70660430 70660565 -128969585 + FLAM_C SINE Alu 5 133 0 2375 87 0 7 chr5 70661215 70661514 -128968636 - AluSc SINE Alu -12 297 1 2174 117 0 0 chr5 70661612 70661910 -128968240 + AluSx SINE Alu 1 298 -14 2079 112 16 10 chr5 70661988 70662291 -128967859 - AluSx SINE Alu -7 305 1 345 290 85 60 chr5 70662438 70662515 -128967635 - MARNA DNA Mariner -354 232 158 2303 93 3 3 chr5 70662515 70662815 -128967335 + AluSx SINE Alu 1 300 -12 345 290 85 60 chr5 70662815 70662937 -128967213 - MARNA DNA Mariner -428 158 28 721 272 74 0 chr5 70663403 70663605 -128966545 + MIR SINE MIR 8 224 -38 2254 107 0 13 chr5 70664069 70664378 -128965772 - AluSx SINE Alu -7 305 1 1335 130 219 12 chr5 70665363 70665609 -128964541 + AluSx SINE Alu 1 297 -15 2115 166 9 15 chr5 70665622 70665960 -128964190 + MER1B DNA MER1_type 2 337 0 1126 169 42 5 chr5 70666489 70666678 -128963472 + AluJb SINE Alu 26 221 -91 3396 107 127 73 chr5 70666690 70666790 -128963360 - Tigger3b DNA MER2_type -2333 695 602 1685 165 10 19 chr5 70666790 70667099 -128963051 - AluJb SINE Alu -5 307 2 3396 107 127 73 chr5 70667099 70667654 -128962496 - Tigger3b DNA MER2_type -2426 602 5 2214 112 3 0 chr5 70667672 70667967 -128962183 - AluSc SINE Alu -13 296 1 358 247 40 56 chr5 70667982 70668172 -128961978 - L1ME LINE L1 -441 5729 5544 2245 123 0 0 chr5 70668477 70668779 -128961371 + AluSx SINE Alu 1 302 -10 1004 203 106 86 chr5 70668922 70669046 -128961104 - L1MD2 LINE L1 -21 6338 6218 1693 93 8 0 chr5 70669046 70669282 -128960868 + L1MA2 LINE L1 6067 6304 0 1004 203 106 86 chr5 70669282 70669367 -128960783 - L1MD2 LINE L1 -141 6218 6136 225 94 0 0 chr5 70669367 70669399 -128960751 + (TATG)n Simple_repeat Simple_repeat 3 34 0 1004 203 106 86 chr5 70669399 70669538 -128960612 - L1MD2 LINE L1 -223 6136 5982 2500 179 77 17 chr5 70669739 70670219 -128959931 - LTR22 LTR ERVK 0 509 1 2229 114 7 0 chr5 70670927 70671224 -128958926 - AluSg SINE Alu -9 301 3 2306 109 0 6 chr5 70671227 70671539 -128958611 - AluSg SINE Alu 0 310 1 2089 108 21 0 chr5 70671952 70672238 -128957912 + AluSg SINE Alu 1 292 -18 1343 127 34 0 chr5 70672352 70672557 -128957593 + AluJo SINE Alu 86 297 -15 2242 100 7 0 chr5 70674521 70674820 -128955330 + AluSp SINE Alu 1 301 -12 1052 135 0 35 chr5 70674917 70675087 -128955063 + FRAM SINE Alu 1 161 -15 36 53 0 0 chr5 70677373 70677430 -128952720 + AT_rich Low_complexity Low_complexity 1 57 0 2425 82 0 0 chr5 70677504 70677798 -128952352 + AluSx SINE Alu 1 294 -18 2544 53 0 7 chr5 70677803 70678102 -128952048 + AluY SINE Alu 1 297 -14 357 250 0 31 chr5 70678192 70678288 -128951862 + L1MC4 LINE L1 6611 6703 -1339 * 369 278 0 0 chr5 70678212 70678302 -128951848 - L1MC4 LINE L1 -1339 6703 6614 2131 129 13 0 chr5 70678764 70679067 -128951083 - AluSx SINE Alu -5 307 1 180 111 0 0 chr5 70679195 70679222 -128950928 + (T)n Simple_repeat Simple_repeat 1 27 0 621 91 0 0 chr5 70679222 70679299 -128950851 - AluSq SINE Alu -109 204 128 504 277 36 38 chr5 70679685 70679704 -128950446 + L1MC4a LINE L1 5674 5692 -476 2212 106 10 3 chr5 70679704 70680005 -128950145 + AluSx SINE Alu 1 303 -9 504 277 36 38 chr5 70680005 70680205 -128949945 + L1MC4a LINE L1 5692 5834 -334 1180 133 0 0 chr5 70680205 70680370 -128949780 + AluSg/x SINE Alu 137 301 -11 298 211 96 29 chr5 70680415 70680519 -128949631 + L1ME4a LINE L1 5946 6056 -65 810 133 30 59 chr5 70680979 70681114 -128949036 + FLAM_C SINE Alu 1 131 -2 261 163 0 0 chr5 70682031 70682080 -128948070 + L1M3 LINE L1 5782 5830 -350 1417 103 5 15 chr5 70682080 70682283 -128947867 + AluSq SINE Alu 1 201 -112 2031 152 3 0 chr5 70682339 70682641 -128947509 + AluSx SINE Alu 1 303 -9 300 381 50 0 chr5 70682950 70683110 -128947040 + L2 LINE L2 3104 3271 -1 1996 40 0 0 chr5 70683871 70684099 -128946051 + AluY SINE Alu 74 301 -10 232 219 0 0 chr5 70684161 70684202 -128945948 + tRNA-Gly-GGG tRNA tRNA 31 71 -3 508 343 72 33 chr5 70684306 70684545 -128945605 + L1M4 LINE L1 4810 5038 -1108 2091 99 31 0 chr5 70684545 70684838 -128945312 - AluSx SINE Alu -10 302 1 508 343 72 33 chr5 70684838 70685077 -128945073 + L1M4 LINE L1 5038 5266 -880 1801 142 10 43 chr5 70685077 70685213 -128944937 + AluSx SINE Alu 1 140 -172 1968 121 0 33 chr5 70685213 70685519 -128944631 + AluSc SINE Alu 1 296 -13 2425 52 7 23 chr5 70685522 70685830 -128944320 + AluY SINE Alu 1 303 -8 1801 142 10 43 chr5 70685830 70685991 -128944159 + AluSx SINE Alu 142 292 -20 508 343 72 33 chr5 70685991 70686050 -128944100 + L1M4 LINE L1 5266 5369 -777 673 144 91 23 chr5 70686240 70686372 -128943778 - FLAM_C SINE Alu -1 142 2 2350 81 0 29 chr5 70686414 70686722 -128943428 + AluSg SINE Alu 1 299 -11 213 39 0 0 chr5 70686743 70686769 -128943381 + (TA)n Simple_repeat Simple_repeat 2 27 0 390 206 68 29 chr5 70686989 70687141 -128943009 - L1ME4a LINE L1 -272 5849 5695 1870 115 22 62 chr5 70687280 70687602 -128942548 + AluSx SINE Alu 1 309 -3 2079 113 6 35 chr5 70688186 70688497 -128941653 - AluSx SINE Alu -10 302 1 21 0 0 0 chr5 70688604 70688625 -128941525 + AT_rich Low_complexity Low_complexity 1 21 0 692 74 0 0 chr5 70688944 70689025 -128941125 - FLAM_A SINE Alu -22 120 40 1457 164 17 0 chr5 70689068 70689300 -128940850 - MER46A DNA MER2_type 0 236 1 1636 178 45 7 chr5 70691261 70691548 -128938602 + AluJo SINE Alu 1 298 -14 2396 80 0 0 chr5 70691709 70692008 -128938142 + AluY SINE Alu 1 299 -12 1680 164 15 4 chr5 70692183 70692451 -128937699 - AluJo SINE Alu -19 293 23 1717 79 9 0 chr5 70692451 70692667 -128937483 + AluY SINE Alu 83 300 -11 774 171 27 126 chr5 70692688 70692910 -128937240 + MLT1A1 LTR MaLR 162 361 -4 1064 209 55 0 chr5 70692915 70693169 -128936981 + L1M4 LINE L1 2635 2902 -3244 2198 105 7 0 chr5 70693206 70693501 -128936649 + AluSx SINE Alu 1 297 -15 2330 84 0 7 chr5 70693506 70693803 -128936347 + AluY SINE Alu 1 295 -16 1790 166 99 3 chr5 70693808 70694152 -128935998 + L1MB2 LINE L1 5755 6131 -40 2243 110 0 0 chr5 70694152 70694451 -128935699 + AluSx SINE Alu 1 299 -13 180 0 0 0 chr5 70694456 70694476 -128935674 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2322 82 0 53 chr5 70694749 70695068 -128935082 - AluSg SINE Alu -8 302 1 208 203 0 62 chr5 70696613 70696677 -128933473 + C-rich Low_complexity Low_complexity 6 65 0 218 56 28 0 chr5 70696719 70696755 -128933395 + (TC)n Simple_repeat Simple_repeat 1 37 0 2240 120 0 0 chr5 70697374 70697682 -128932468 + AluSx SINE Alu 1 308 -4 2355 94 3 0 chr5 70697803 70698101 -128932049 + AluSx SINE Alu 1 299 -13 525 281 44 0 chr5 70698129 70698289 -128931861 - MIR SINE MIR -56 206 40 260 275 135 86 chr5 70698258 70698480 -128931670 + L2 LINE L2 448 680 -2634 * 2249 116 6 0 chr5 70698485 70698796 -128931354 - AluSq SINE Alu 0 313 1 243 133 0 0 chr5 70698796 70698841 -128931309 + (T)n Simple_repeat Simple_repeat 1 45 0 826 184 0 53 chr5 70698956 70699108 -128931042 - FRAM SINE Alu -32 144 1 317 343 64 57 chr5 70699112 70699377 -128930773 + L2 LINE L2 2838 3104 -209 1134 87 7 7 chr5 70699512 70699661 -128930489 + AluSq/x SINE Alu 1 149 -163 433 182 0 13 chr5 70699672 70699749 -128930401 - AluJ/FLAM SINE Alu -235 77 2 229 145 26 145 chr5 70699749 70699825 -128930325 - HAL1 LINE L1 -193 2314 2248 244 230 0 40 chr5 70699992 70700066 -128930084 - L1ME LINE L1 -326 5795 5725 1651 193 0 13 chr5 70700118 70700429 -128929721 - AluJo SINE Alu -5 307 1 921 129 0 7 chr5 70700487 70700627 -128929523 - AluSx SINE Alu 0 310 172 535 132 0 0 chr5 70700627 70700703 -128929447 - AluSx SINE Alu -235 77 2 597 302 68 46 chr5 70700723 70701254 -128928896 - L1ME3A LINE L1 -295 5875 5330 835 176 0 7 chr5 70701276 70701412 -128928738 - AluJo SINE Alu -176 136 2 652 250 116 72 chr5 70701413 70701719 -128928431 - L1ME3A LINE L1 -865 5281 4990 924 126 0 22 chr5 70701719 70701854 -128928296 - FLAM_C SINE Alu 0 133 2 652 250 116 72 chr5 70701854 70702131 -128928019 - L1ME3A LINE L1 -1156 4990 4672 459 234 89 46 chr5 70702158 70702461 -128927689 + L1MC5 LINE L1 7609 7924 -37 2226 77 7 11 chr5 70702483 70702769 -128927381 - AluSc SINE Alu -24 285 1 3558 129 20 20 chr5 70702769 70703150 -128927000 - L1MA3 LINE L1 -486 5819 5439 2480 71 0 16 chr5 70703150 70703460 -128926690 - AluSg SINE Alu -5 305 1 3558 129 20 20 chr5 70703460 70703989 -128926161 - L1MA3 LINE L1 -866 5439 4906 1969 211 37 102 chr5 70703997 70704600 -128925550 - LTR8 LTR ERV1 -66 625 68 2232 99 3 3 chr5 70704600 70704892 -128925258 + AluSp SINE Alu 1 292 -21 1969 211 37 102 chr5 70704892 70704956 -128925194 - LTR8 LTR ERV1 -623 68 1 1266 157 60 32 chr5 70704956 70705204 -128924946 + MER34C LTR ERV1 63 317 -268 10633 160 60 96 chr5 70705209 70705665 -128924485 - L1 LINE L1 -1227 6338 5867 2205 118 0 3 chr5 70705665 70705969 -128924181 - AluSg SINE Alu -4 306 4 10633 160 60 96 chr5 70705969 70706218 -128923932 - L1 LINE L1 -1698 5867 5610 2025 90 90 11 chr5 70706218 70706496 -128923654 + AluSp SINE Alu 3 302 -11 10633 160 60 96 chr5 70706496 70707171 -128922979 - L1 LINE L1 -1955 5610 4912 1809 101 70 28 chr5 70707171 70707457 -128922693 - AluSx SINE Alu -14 298 1 10633 160 60 96 chr5 70707457 70707799 -128922351 - L1 LINE L1 -2653 4912 4559 473 176 0 0 chr5 70707799 70707873 -128922277 - MER68 LTR ERV1 -285 277 204 255 146 91 0 chr5 70707874 70707929 -128922221 - THE1B LTR MaLR -110 254 195 463 154 43 77 chr5 70707936 70707955 -128922195 - MER50 LTR ERV1 -130 604 586 2250 81 0 3 chr5 70707955 70708262 -128921888 - AluSc SINE Alu 0 306 1 463 154 43 77 chr5 70708262 70708358 -128921792 - MER50 LTR ERV1 -148 586 492 10633 160 60 96 chr5 70708358 70710195 -128919955 - L1 LINE L1 -3012 4553 2650 2209 100 3 25 chr5 70710195 70710514 -128919636 - AluSp SINE Alu -1 312 1 10633 160 60 96 chr5 70710514 70710619 -128919531 - L1 LINE L1 -4915 2650 2543 1151 142 0 0 chr5 70710619 70710795 -128919355 - AluSq SINE Alu 0 313 138 10633 160 60 96 chr5 70710795 70711087 -128919063 - L1 LINE L1 -5022 2543 2242 1781 156 0 33 chr5 70711087 70711394 -128918756 + AluJb SINE Alu 1 297 -15 2044 132 7 0 chr5 70711398 70711686 -128918464 + AluSq SINE Alu 5 294 -19 10633 160 60 96 chr5 70711686 70712730 -128917420 - L1 LINE L1 -5326 2239 891 1733 155 0 59 chr5 70712759 70712926 -128917224 - AluJo SINE Alu -15 297 154 2429 80 0 7 chr5 70712926 70713228 -128916922 - AluSg SINE Alu -10 300 1 1733 155 0 59 chr5 70713228 70713364 -128916786 - AluJo SINE Alu -158 154 12 1583 165 40 11 chr5 70713371 70713664 -128916486 - AluJo SINE Alu 0 301 1 1809 175 3 13 chr5 70714325 70714634 -128915516 - AluJo SINE Alu -5 307 2 2167 107 20 3 chr5 70715086 70715386 -128914764 - AluSx SINE Alu -7 305 1 1892 175 0 3 chr5 70715643 70715952 -128914198 + AluSx SINE Alu 1 308 -4 2478 80 0 0 chr5 70716068 70716370 -128913780 + AluSg SINE Alu 1 302 -8 298 304 9 36 chr5 70716835 70716947 -128913203 + MIR SINE MIR 154 262 0 24 32 0 0 chr5 70717067 70717098 -128913052 + AT_rich Low_complexity Low_complexity 1 31 0 1989 139 13 3 chr5 70717645 70717946 -128912204 - AluSx SINE Alu -7 305 2 765 156 31 39 chr5 70717979 70718107 -128912043 + FLAM_C SINE Alu 7 133 -10 1794 146 58 0 chr5 70718171 70718465 -128911685 - AluSq SINE Alu -2 311 1 299 149 0 0 chr5 70718466 70718518 -128911632 - L1M1 LINE L1 -522 5658 5609 490 143 0 24 chr5 70718624 70718708 -128911442 + AluJ/FRAM SINE Alu 229 310 -2 1659 222 82 2 chr5 70718741 70719142 -128911008 + L1ME1 LINE L1 5704 6136 -30 269 314 113 0 chr5 70719165 70719289 -128910861 - MLT1K LTR MaLR -62 526 389 647 283 145 25 chr5 70719351 70719627 -128910523 - MLT1K LTR MaLR -273 315 7 2438 69 0 10 chr5 70720201 70720505 -128909645 - AluY SINE Alu -10 301 1 1848 179 0 0 chr5 70720619 70720916 -128909234 + AluJb SINE Alu 3 299 -13 344 272 39 0 chr5 70721317 70721420 -128908730 - MIR SINE MIR 0 262 156 2311 96 0 10 chr5 70721890 70722203 -128907947 + AluSg SINE Alu 1 310 0 1736 179 3 3 chr5 70722640 70722941 -128907209 - AluJb SINE Alu -11 301 1 1336 247 67 63 chr5 70723165 70723312 -128906838 - L2 LINE L2 -1337 1977 1832 519 17 0 0 chr5 70723312 70723372 -128906778 + (TG)n Simple_repeat Simple_repeat 1 60 0 2349 66 3 3 chr5 70723375 70723664 -128906486 - AluSg SINE Alu -21 289 1 1336 247 67 63 chr5 70723664 70723989 -128906161 - L2 LINE L2 -1483 1831 1499 2427 93 0 3 chr5 70724222 70724533 -128905617 + AluSx SINE Alu 1 310 -2 830 161 0 8 chr5 70725260 70725384 -128904766 + FLAM_A SINE Alu 8 130 -12 1662 198 34 14 chr5 70725843 70726192 -128903958 + L1MC4 LINE L1 6731 7086 -956 22 56 0 0 chr5 70726280 70726316 -128903834 + AT_rich Low_complexity Low_complexity 1 36 0 470 214 5 91 chr5 70726322 70726426 -128903724 + L1MC4 LINE L1 7070 7153 -889 2222 128 0 0 chr5 70726426 70726723 -128903427 - AluJo SINE Alu -15 297 1 470 214 5 91 chr5 70726723 70726805 -128903345 + L1MC4 LINE L1 7153 7240 -802 1216 136 9 59 chr5 70726805 70727026 -128903124 + AluJo SINE Alu 87 296 -16 2246 92 23 0 chr5 70727028 70727331 -128902819 + AluSp SINE Alu 1 310 -3 3046 181 70 43 chr5 70727340 70727516 -128902634 + L1MC4 LINE L1 7248 7418 -624 2376 98 0 0 chr5 70727516 70727813 -128902337 + AluSx SINE Alu 1 297 -15 3046 181 70 43 chr5 70727813 70728108 -128902042 + L1MC4 LINE L1 7418 7704 -338 2414 86 0 3 chr5 70728108 70728410 -128901740 + AluSq SINE Alu 1 301 -12 3046 181 70 43 chr5 70728410 70728678 -128901472 + L1MC4 LINE L1 7704 8008 -34 2344 82 0 53 chr5 70728887 70729206 -128900944 - AluSg SINE Alu -8 302 1 208 203 0 62 chr5 70730752 70730816 -128899334 + C-rich Low_complexity Low_complexity 6 65 0 218 56 28 0 chr5 70730858 70730894 -128899256 + (TC)n Simple_repeat Simple_repeat 1 37 0 2259 120 0 0 chr5 70731513 70731821 -128898329 + AluSx SINE Alu 1 308 -4 2289 102 3 3 chr5 70731941 70732246 -128897904 + AluSp SINE Alu 1 305 -8 2582 64 0 0 chr5 70732257 70732568 -128897582 + AluY SINE Alu 1 311 0 372 326 30 62 chr5 70732915 70733001 -128897149 - L1ME3A LINE L1 -335 5835 5748 2499 71 0 0 chr5 70733001 70733297 -128896853 - AluY SINE Alu -15 296 1 372 326 30 62 chr5 70733297 70733401 -128896749 - L1ME3A LINE L1 -422 5748 5656 618 242 204 0 chr5 70733401 70733558 -128896592 - MER5A DNA MER1_type 0 189 1 372 326 30 62 chr5 70733558 70733670 -128896480 - L1ME3A LINE L1 -514 5656 5542 5167 78 6 15 chr5 70733696 70734373 -128895777 + LTR8 LTR ERV1 1 671 -20 418 266 53 53 chr5 70734380 70734587 -128895563 - L1ME3A LINE L1 -663 5499 5293 1742 169 197 21 chr5 70734587 70734605 -128895545 - LTR54 LTR ERV1 -2 508 494 2018 141 10 7 chr5 70734605 70734911 -128895239 + AluSx SINE Alu 1 307 -5 1742 169 197 21 chr5 70734911 70735131 -128895019 - LTR54 LTR ERV1 -16 494 314 2433 68 0 34 chr5 70735131 70735452 -128894698 + AluSg SINE Alu 1 310 0 1742 169 197 21 chr5 70735452 70735644 -128894506 - LTR54 LTR ERV1 -196 314 1 2285 119 7 0 chr5 70735695 70736005 -128894145 + AluSx SINE Alu 1 312 0 519 203 134 27 chr5 70736132 70736474 -128893676 - LTR56 LTR ERV1 0 445 1 2214 89 24 0 chr5 70736781 70737073 -128893077 + AluSx SINE Alu 1 299 -13 2174 122 3 0 chr5 70737614 70737910 -128892240 - AluSx SINE Alu -14 298 2 955 151 88 12 chr5 70738157 70738517 -128891633 - MER63 DNA MER1_type 0 1061 3 1760 170 61 21 chr5 70738517 70738847 -128891303 + MER61A LTR ERV1 1 343 0 1003 304 146 3 chr5 70738852 70739230 -128890920 + LTR16A LTR ERVL 17 448 -2 2506 129 30 10 chr5 70739277 70739672 -128890478 - MER57A LTR ERV1 0 403 1 495 345 88 44 chr5 70739760 70740308 -128889842 - L2 LINE L2 -437 2877 2306 301 232 61 0 chr5 70740308 70740390 -128889760 - L2 LINE L2 -1286 2028 1942 693 148 0 0 chr5 70740412 70740513 -128889637 + Tigger7 DNA MER2_type 10 110 -2377 1221 145 0 0 chr5 70740516 70740695 -128889455 - AluSg/x SINE Alu 0 312 134 2418 87 7 0 chr5 70740695 70741004 -128889146 - AluSp SINE Alu -2 311 1 1822 171 0 23 chr5 70741006 70741316 -128888834 - AluJb SINE Alu -7 305 3 2400 187 49 21 chr5 70741317 70741898 -128888252 + Tigger7 DNA MER2_type 100 2587 0 2295 102 6 16 chr5 70742059 70742374 -128887776 + AluSp SINE Alu 1 312 -1 796 161 8 0 chr5 70742378 70742508 -128887642 + FLAM_C SINE Alu 3 133 0 2040 175 74 43 chr5 70742523 70742632 -128887518 - LTR2B LTR ERV1 0 490 386 2466 75 0 7 chr5 70742632 70742937 -128887213 + AluY SINE Alu 1 303 -8 2040 175 74 43 chr5 70742937 70743272 -128886878 - LTR2B LTR ERV1 -104 386 32 3951 43 11 0 chr5 70743291 70743754 -128886396 - Harlequin LTR ERV1 -1 6895 6428 9305 91 8 0 chr5 70743767 70744996 -128885154 - Harlequin LTR ERV1 -440 6456 5218 335 122 0 0 chr5 70744997 70745046 -128885104 - LTR8A LTR ERV1 -274 453 405 2641 103 48 0 chr5 70745103 70745482 -128884668 - LTR8A LTR ERV1 -330 397 1 865 71 32 84 chr5 70745687 70745758 -128884392 - MER41A LTR ERV1 0 554 494 2382 88 3 0 chr5 70745758 70746055 -128884095 + AluSp SINE Alu 1 298 -15 865 71 32 84 chr5 70746055 70746138 -128884012 - MER41A LTR ERV1 -60 494 408 870 57 0 0 chr5 70746141 70746246 -128883904 - MER41B LTR ERV1 -530 105 1 3438 77 20 4 chr5 70746253 70746668 -128883482 + LTR46 LTR ERV1 1 425 -35 297 0 0 0 chr5 70746668 70746701 -128883449 + (TG)n Simple_repeat Simple_repeat 2 34 0 3438 77 20 4 chr5 70746701 70746738 -128883412 + LTR46 LTR ERV1 425 460 0 643 263 35 25 chr5 70746739 70746937 -128883213 - MIR SINE MIR -45 217 18 615 129 10 0 chr5 70746982 70747083 -128883067 + MER41B LTR ERV1 1 102 -533 2205 81 14 0 chr5 70747100 70747384 -128882766 - AluSp SINE Alu -21 292 5 975 95 27 14 chr5 70747384 70747531 -128882619 + MER41A LTR ERV1 406 554 0 1246 174 13 13 chr5 70747824 70748048 -128882102 - AluJb SINE Alu 0 312 89 2491 73 3 0 chr5 70748408 70748709 -128881441 + AluSp SINE Alu 1 302 -11 26 0 0 0 chr5 70749291 70749317 -128880833 + GC_rich Low_complexity Low_complexity 1 26 0 2347 82 7 3 chr5 70750204 70750507 -128879643 - AluSp SINE Alu -9 304 1 981 233 86 69 chr5 70750651 70750785 -128879365 + L1MC4 LINE L1 7626 7756 -286 2214 87 10 37 chr5 70750785 70751083 -128879067 + AluSx SINE Alu 1 290 -22 981 233 86 69 chr5 70751083 70751355 -128878795 + L1MC4 LINE L1 7756 8039 -3 1388 186 13 4 chr5 70751729 70751966 -128878184 + AluJb SINE Alu 44 282 -30 234 149 0 45 chr5 70752095 70752111 -128878039 + (TTCC)n Simple_repeat Simple_repeat 1 16 -48 2689 45 0 0 chr5 70752111 70752422 -128877728 - AluY SINE Alu 0 311 1 234 149 0 45 chr5 70752422 70752472 -128877678 + (TTCC)n Simple_repeat Simple_repeat 16 64 0 890 243 0 11 chr5 70752479 70752668 -128877482 - AluJo SINE Alu -18 294 108 1061 182 17 0 chr5 70752668 70752844 -128877306 - AluJo SINE Alu -133 179 1 664 161 129 16 chr5 70753012 70753136 -128877014 - AluJo SINE Alu -173 139 2 1521 93 9 37 chr5 70753243 70753458 -128876692 + AluSq SINE Alu 2 210 -103 522 227 200 0 chr5 70753681 70753842 -128876308 + MIR SINE MIR 62 252 -10 696 254 90 27 chr5 70754204 70754460 -128875690 - L1MC4 LINE L1 -3 8039 7768 305 234 148 23 chr5 70754531 70754659 -128875491 - HAL1 LINE L1 -2115 392 249 2039 122 25 0 chr5 70754987 70755266 -128874884 - AluSx SINE Alu -26 286 1 1147 148 91 33 chr5 70755274 70755484 -128874666 - AluJb SINE Alu -26 286 65 911 82 0 44 chr5 70755497 70755632 -128874518 + FLAM_C SINE Alu 5 133 0 2393 87 0 7 chr5 70756280 70756579 -128873571 - AluSc SINE Alu -12 297 1 2226 114 0 0 chr5 70756677 70756975 -128873175 + AluSx SINE Alu 1 298 -14 2008 114 17 13 chr5 70757053 70757351 -128872799 - AluSx SINE Alu -13 299 1 2136 71 8 4 chr5 70757704 70757972 -128872178 + AluSx SINE Alu 31 299 -13 658 272 74 0 chr5 70758560 70758762 -128871388 + MIR SINE MIR 8 224 -38 27 0 0 0 chr5 70759264 70759291 -128870859 + AT_rich Low_complexity Low_complexity 1 27 0 2077 89 0 0 chr5 70759613 70759872 -128870278 - AluSx SINE Alu -19 293 35 413 266 26 0 chr5 70760581 70760694 -128869456 - L2 LINE L2 -9 3304 3189 15094 62 8 21 chr5 70761368 70763436 -128866714 + L1P LINE L1 2541 4581 -1565 666 300 78 63 chr5 70764419 70764975 -128865175 + L2 LINE L2 2456 3022 -291 416 301 116 0 chr5 70765310 70765483 -128864667 - L2 LINE L2 0 3313 3121 2718 143 14 14 chr5 70765719 70766145 -128864005 + MSTC LTR MaLR 1 426 -2 1864 138 3 7 chr5 70766269 70766577 -128863573 - AluJb SINE Alu 0 307 1 7248 112 33 9 chr5 70767958 70769614 -128860536 - L1PBa LINE L1 -4390 2473 634 1088 177 5 5 chr5 70769614 70769812 -128860338 - L1PBa LINE L1 -6663 200 3 1576 137 0 0 chr5 70770022 70770249 -128859901 + AluSg/x SINE Alu 76 302 -8 24 53 0 0 chr5 70771816 70771854 -128858296 + AT_rich Low_complexity Low_complexity 1 38 0 782 145 102 81 chr5 70772240 70772426 -128857724 + MER46A DNA MER2_type 47 236 0 975 180 33 66 chr5 70773412 70773656 -128856494 + MER46A DNA MER2_type 1 236 0 321 248 20 85 chr5 70773697 70773850 -128856300 + L2 LINE L2 2633 2775 -539 387 176 14 0 chr5 70776994 70777068 -128853082 + MER116 DNA Mariner 6 80 0 2052 156 8 20 chr5 70777646 70778036 -128852114 - MER101B LTR ERV1 0 570 186 315 188 0 0 chr5 70778057 70778121 -128852029 + MER31-int LTR ERV1 1743 1806 -3130 1533 155 26 40 chr5 70778131 70778435 -128851715 + MER101B LTR ERV1 8 307 -263 203 173 56 67 chr5 70778584 70778763 -128851387 + (TTGTG)n Simple_repeat Simple_repeat 4 180 0 3236 148 22 22 chr5 70778980 70779576 -128850574 - MER54A LTR ERVL -305 596 1 291 263 10 30 chr5 70779578 70779677 -128850473 + L2 LINE L2 3006 3102 -170 21 36 0 0 chr5 70780076 70780104 -128850046 + AT_rich Low_complexity Low_complexity 1 28 0 201 351 121 18 chr5 70780233 70780398 -128849752 + L2 LINE L2 2976 3157 -115 11786 21 6 0 chr5 70781046 70783179 -128846971 + L1PA3 LINE L1 3999 6140 -15 2402 98 81 39 chr5 70783286 70783468 -128846682 + MSTA LTR MaLR 3 176 -252 1495 150 0 0 chr5 70783468 70783681 -128846469 + AluSg/x SINE Alu 88 300 -12 2402 98 81 39 chr5 70783681 70783906 -128846244 + MSTA LTR MaLR 176 427 -1 1975 149 3 0 chr5 70784216 70784512 -128845638 - AluSx SINE Alu -14 298 2 208 388 44 19 chr5 70784530 70784690 -128845460 + L2 LINE L2 2886 3049 -223 2896 202 88 26 chr5 70785727 70786915 -128843235 - L1MC4 LINE L1 -20 6146 4902 720 201 26 53 chr5 70786915 70786939 -128843211 + Charlie2 DNA MER1_type 2605 2628 -234 1842 137 6 78 chr5 70786939 70787261 -128842889 + AluSx SINE Alu 1 299 -13 720 201 26 53 chr5 70787261 70787500 -128842650 + Charlie2 DNA MER1_type 2628 2861 -1 183 407 76 0 chr5 70787596 70787741 -128842409 - L2 LINE L2 -834 2480 2325 487 279 13 32 chr5 70787936 70788090 -128842060 + MIR SINE MIR 4 154 -108 459 207 77 30 chr5 70788256 70788425 -128841725 - LTR37B LTR ERV1 -5 463 287 198 240 80 70 chr5 70789071 70789171 -128840979 - L3 LINE CR1 -1044 533 433 26 0 0 0 chr5 70789463 70789489 -128840661 + AT_rich Low_complexity Low_complexity 1 26 0 240 250 10 20 chr5 70791316 70791416 -128838734 + L1MB7 LINE L1 5032 5130 -1016 2666 196 62 44 chr5 70791454 70792293 -128837857 + L1MB7 LINE L1 5319 6172 -12 824 211 30 111 chr5 70792445 70792815 -128837335 - MLT1A2 LTR MaLR -11 363 24 1590 163 35 54 chr5 70793287 70793655 -128836495 - THE1C LTR MaLR 0 375 15 464 185 13 60 chr5 70793832 70793983 -128836167 - L1M4 LINE L1 -1120 5026 4883 1725 144 0 8 chr5 70793998 70794248 -128835902 - AluSq SINE Alu -65 248 1 1155 167 26 4 chr5 70794283 70794511 -128835639 - MLT1D LTR MaLR 0 505 273 1472 259 30 26 chr5 70794511 70794971 -128835179 + MLT1C LTR MaLR 3 464 -3 316 246 27 36 chr5 70794982 70795092 -128835058 - MLT1D LTR MaLR -338 288 180 2275 78 7 32 chr5 70795092 70795401 -128834749 - AluSg SINE Alu -9 301 1 606 151 109 0 chr5 70795442 70795561 -128834589 + AluJb SINE Alu 1 132 -180 735 221 13 25 chr5 70795824 70795982 -128834168 - AluJo/FRAM SINE Alu -10 292 137 1184 68 31 144 chr5 70795985 70796207 -128833943 - AluYb8 SINE Alu -4 314 118 267 295 19 0 chr5 70797026 70797131 -128833019 - L1M4 LINE L1 -3595 2551 2445 3246 136 74 10 chr5 70797166 70797784 -128832366 - L1MA9 LINE L1 -1 6311 5654 295 260 67 31 chr5 70797794 70798017 -128832133 - L1M4 LINE L1 -3679 2467 2237 376 194 36 0 chr5 70798044 70798305 -128831845 + (TA)n Simple_repeat Simple_repeat 1 270 0 1515 162 3 91 chr5 70798521 70798830 -128831320 - AluJo SINE Alu -30 282 1 41 36 0 0 chr5 70799481 70799536 -128830614 + AT_rich Low_complexity Low_complexity 1 55 0 494 190 26 9 chr5 70799536 70799652 -128830498 - L1PA11 LINE L1 -2 6172 6055 4967 85 16 13 chr5 70799654 70800513 -128829637 - L1PA11 LINE L1 -118 6013 5153 * 8250 111 11 2 chr5 70800510 70801824 -128828326 + L1P LINE L1 2925 4249 -1897 1065 86 0 0 chr5 70801824 70801952 -128828198 + AluSq/x SINE Alu 1 128 -184 437 17 0 34 chr5 70801952 70802011 -128828139 + (TAA)n Simple_repeat Simple_repeat 2 58 0 5837 158 11 9 chr5 70805635 70807743 -128822407 + L1PB1 LINE L1 3982 6097 -54 2206 110 3 7 chr5 70807743 70808043 -128822107 + AluSg SINE Alu 1 299 -11 5837 158 11 9 chr5 70808043 70808099 -128822051 + L1PB1 LINE L1 6097 6151 0 22 0 0 0 chr5 70808099 70808121 -128822029 + AT_rich Low_complexity Low_complexity 1 22 0 274 222 0 62 chr5 70809465 70809546 -128820604 - AluJ/FLAM SINE Alu -224 78 3 1345 102 122 0 chr5 70809627 70809832 -128820318 + MER30 DNA MER1_type 1 230 0 684 120 45 0 chr5 70810783 70810916 -128819234 + L1MA5 LINE L1 6159 6297 -3 863 154 0 0 chr5 70811830 70811953 -128818197 + FLAM_C SINE Alu 1 123 -20 2001 134 21 0 chr5 70812700 70812984 -128817166 - AluSx SINE Alu -22 290 1 5358 130 13 15 chr5 70812985 70814137 -128816013 + L1M1 LINE L1 4317 5466 -839 1883 141 0 0 chr5 70814137 70814440 -128815710 + AluSx SINE Alu 14 316 0 5358 130 13 15 chr5 70814440 70814734 -128815416 + L1M1 LINE L1 5466 5759 -546 506 257 56 67 chr5 70814727 70814898 -128815252 + HAL1 LINE L1 1842 2009 -498 * 2481 78 0 0 chr5 70814898 70815207 -128814943 + AluSc SINE Alu 1 309 0 506 257 56 67 chr5 70815207 70815377 -128814773 + HAL1 LINE L1 2009 2179 -328 4072 149 21 32 chr5 70815380 70815662 -128814488 + L1PA16 LINE L1 5409 5692 -474 2327 123 0 0 chr5 70815662 70815972 -128814178 + AluSx SINE Alu 1 310 -2 1802 96 28 99 chr5 70815978 70816300 -128813850 + AluSx SINE Alu 13 311 -1 4072 149 21 32 chr5 70816300 70816767 -128813383 + L1PA16 LINE L1 5697 6157 -9 943 173 103 130 chr5 70816869 70817170 -128812980 + AluSx SINE Alu 2 294 -8 31 36 0 18 chr5 70817234 70817272 -128812878 + AT_rich Low_complexity Low_complexity 1 39 -16 1720 144 7 14 chr5 70817272 70817557 -128812593 + AluSq SINE Alu 1 283 -30 31 36 0 18 chr5 70817557 70817574 -128812576 + AT_rich Low_complexity Low_complexity 39 55 0 964 252 16 28 chr5 70818471 70818867 -128811283 - LTR16A LTR ERVL -4 446 25 273 57 0 0 chr5 70819470 70819505 -128810645 + (GA)n Simple_repeat Simple_repeat 2 36 0 704 250 165 0 chr5 70819505 70819705 -128810445 - MIR SINE MIR -20 242 10 1319 151 158 26 chr5 70820692 70820964 -128809186 - AluJo SINE Alu 0 312 5 460 351 93 32 chr5 70822876 70823361 -128806789 + L2 LINE L2 2601 3112 -160 442 271 104 35 chr5 70824252 70824396 -128805754 + MIR SINE MIR 5 158 -104 196 256 33 89 chr5 70824936 70825026 -128805124 + MIR SINE MIR 20 104 -158 183 346 59 10 chr5 70825338 70825439 -128804711 - MIR SINE MIR 0 262 157 4196 71 17 54 chr5 70827830 70828533 -128801617 + L1P LINE L1 1 677 -5469 32 43 0 0 chr5 70829085 70829131 -128801019 + AT_rich Low_complexity Low_complexity 1 46 0 214 225 43 43 chr5 70830342 70830480 -128799670 + (TTATA)n Simple_repeat Simple_repeat 5 142 0 1719 122 17 24 chr5 70830554 70830863 -128799287 - AluSx SINE Alu 0 312 13 303 312 187 21 chr5 70831258 70831595 -128798555 + L1M4 LINE L1 2110 2502 -3644 33 0 0 0 chr5 70833194 70833227 -128796923 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 70833790 70833820 -128796330 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr5 70834735 70834772 -128795378 + AT_rich Low_complexity Low_complexity 1 37 0 24 53 0 0 chr5 70834888 70834926 -128795224 + AT_rich Low_complexity Low_complexity 1 38 0 394 195 0 0 chr5 70886072 70886149 -128744001 - L1MC/D LINE L1 -2370 5438 5362 1817 141 30 14 chr5 70886150 70886447 -128743703 + AluJb SINE Alu 1 302 -10 343 244 23 23 chr5 70886564 70886650 -128743500 + L2 LINE L2 3228 3313 0 1708 64 0 0 chr5 70887209 70887451 -128742699 + AluY SINE Alu 81 322 0 263 44 156 0 chr5 70887653 70887698 -128742452 - L1M LINE L1 -779 5401 5350 2391 98 3 3 chr5 70887739 70888045 -128742105 + AluSq SINE Alu 1 306 -7 839 156 0 7 chr5 70888068 70888203 -128741947 + AluJb SINE Alu 3 136 -176 2329 66 28 0 chr5 70888224 70888511 -128741639 + AluY SINE Alu 1 295 -16 1963 116 0 36 chr5 70888513 70888651 -128741499 + AluJb SINE Alu 1 142 -170 2118 144 0 3 chr5 70888651 70888964 -128741186 + AluSx SINE Alu 1 312 0 1963 116 0 36 chr5 70888964 70889127 -128741023 + AluJb SINE Alu 142 291 -21 361 228 67 67 chr5 70889127 70889276 -128740874 - L1MC/D LINE L1 -2023 5785 5637 420 299 75 0 chr5 70889277 70889411 -128740739 - MIR SINE MIR -78 184 41 561 128 0 0 chr5 70889526 70889612 -128740538 - AluJ/FRAM SINE Alu -9 303 218 579 237 7 7 chr5 70889730 70889865 -128740285 + AluJo SINE Alu 4 138 -174 2037 142 7 0 chr5 70889865 70890161 -128739989 + AluSx SINE Alu 1 298 -14 27 0 0 0 chr5 70890166 70890193 -128739957 + AT_rich Low_complexity Low_complexity 1 27 0 236 277 107 27 chr5 70890449 70890561 -128739589 - MIR SINE MIR -22 240 120 213 209 0 0 chr5 70890561 70890604 -128739546 + MIR SINE MIR 72 114 -148 1857 138 20 14 chr5 70891196 70891492 -128738658 + AluJb SINE Alu 1 298 -14 806 173 0 15 chr5 70891541 70891674 -128738476 - FLAM_A SINE Alu -2 131 1 436 104 15 0 chr5 70891708 70891775 -128738375 + L1MC1 LINE L1 6266 6333 0 922 105 0 0 chr5 70892065 70892189 -128737961 - AluSg/x SINE Alu -1 311 188 2207 91 0 7 chr5 70892291 70892578 -128737572 - AluY SINE Alu -26 285 1 2464 151 31 2 chr5 70892628 70893088 -128737062 - MER1A DNA MER1_type -1 528 4 282 115 211 0 chr5 70893088 70893135 -128737015 - MER1A DNA MER1_type -469 58 1 1466 169 131 4 chr5 70893183 70893450 -128736700 + AluJo SINE Alu 2 302 0 2282 86 7 3 chr5 70893653 70893944 -128736206 - AluSx SINE Alu -20 292 1 249 274 63 0 chr5 70893986 70894081 -128736069 - L1MC4 LINE L1 -132 7910 7810 459 94 65 35 chr5 70894195 70894902 -128735248 + (TA)n Simple_repeat Simple_repeat 1 728 0 2392 81 0 0 chr5 70894902 70895187 -128734963 - AluSg SINE Alu -25 285 1 683 174 14 42 chr5 70895188 70895332 -128734818 - AluJo SINE Alu -171 141 2 83 29 0 0 chr5 70895408 70895512 -128734638 + AT_rich Low_complexity Low_complexity 1 104 0 923 135 0 0 chr5 70895935 70896068 -128734082 + FLAM_C SINE Alu 1 133 0 2352 104 0 0 chr5 70896139 70896438 -128733712 + AluSx SINE Alu 1 299 -13 552 191 36 12 chr5 70896757 70896925 -128733225 + GA-rich Low_complexity Low_complexity 4 175 0 2355 95 0 3 chr5 70896929 70897233 -128732917 + AluY SINE Alu 1 303 -8 890 188 61 20 chr5 70897242 70897439 -128732711 + L1ME3 LINE L1 5945 6149 -13 2300 105 0 0 chr5 70897455 70897750 -128732400 - AluSx SINE Alu -15 297 3 1056 157 30 40 chr5 70897750 70897948 -128732202 - AluJb SINE Alu -33 279 84 2304 88 3 3 chr5 70897958 70898254 -128731896 - AluSg SINE Alu -14 296 1 2122 113 0 23 chr5 70898308 70898632 -128731518 - AluSx SINE Alu 0 312 1 357 24 0 0 chr5 70898781 70898823 -128731327 + (TG)n Simple_repeat Simple_repeat 1 42 0 2447 69 0 38 chr5 70899320 70899640 -128730510 + AluY SINE Alu 1 308 -3 936 93 35 93 chr5 70899865 70899961 -128730189 - L1M3 LINE L1 -630 5550 5466 2091 104 11 4 chr5 70899961 70900260 -128729890 + AluSx SINE Alu 2 302 0 936 93 35 93 chr5 70900260 70900334 -128729816 - L1M3 LINE L1 -714 5466 5389 2264 111 10 7 chr5 70900435 70900741 -128729409 + AluSx SINE Alu 1 307 -5 1611 159 64 61 chr5 70900742 70901088 -128729062 - L1MB7 LINE L1 -150 6034 5688 1016 130 74 0 chr5 70901178 70901340 -128728810 + AluSg/x SINE Alu 138 311 -1 423 0 0 0 chr5 70901365 70901412 -128728738 + (CA)n Simple_repeat Simple_repeat 2 48 0 1006 119 126 0 chr5 70901797 70901948 -128728202 + AluSp SINE Alu 1 170 -143 1616 92 14 0 chr5 70901957 70902164 -128727986 + AluSg/x SINE Alu 90 299 -11 1387 94 10 5 chr5 70902164 70902356 -128727794 + AluSp SINE Alu 110 302 -11 2380 86 0 3 chr5 70902356 70902658 -128727492 + AluSg SINE Alu 1 301 -9 1455 196 16 26 chr5 70903423 70903558 -128726592 + AluJo SINE Alu 4 139 -173 2362 96 0 6 chr5 70903558 70903870 -128726280 + AluSg SINE Alu 1 310 0 1455 196 16 26 chr5 70903870 70904040 -128726110 + AluJo SINE Alu 139 306 -6 1572 133 92 0 chr5 70904142 70904382 -128725768 + AluSx SINE Alu 6 267 -45 1977 173 186 19 chr5 70904401 70904864 -128725286 - LTR49 LTR ERV1 -55 540 1 1772 180 0 20 chr5 70904947 70905253 -128724897 - AluJo SINE Alu -12 300 1 245 275 127 48 chr5 70905316 70905505 -128724645 + MLT1I LTR MaLR 5 208 -201 647 195 0 7 chr5 70905519 70905668 -128724482 + (TG)n Simple_repeat Simple_repeat 1 148 0 464 252 41 8 chr5 70905691 70905814 -128724336 + MLT1I LTR MaLR 244 370 -39 264 161 196 0 chr5 70905828 70905884 -128724266 + MLT1I LTR MaLR 335 401 -8 762 148 169 0 chr5 70906053 70906195 -128723955 + AluSg/x SINE Alu 135 300 -10 180 111 0 0 chr5 70906305 70906332 -128723818 + (TA)n Simple_repeat Simple_repeat 2 28 0 230 267 47 0 chr5 70906336 70906422 -128723728 - L1MC4 LINE L1 -1339 6703 6614 1362 189 17 60 chr5 70906514 70906816 -128723334 - AluJo SINE Alu -23 289 1 1118 179 68 17 chr5 70907245 70907423 -128722727 + MER82 DNA MER2_type 8 175 -478 5581 132 89 55 chr5 70907423 70907676 -128722474 - Tigger3b DNA MER2_type -1797 1231 988 1953 136 21 3 chr5 70907676 70907963 -128722187 + AluSx SINE Alu 1 292 -20 5581 132 89 55 chr5 70907963 70908599 -128721551 - Tigger3b DNA MER2_type -2040 988 288 2331 94 7 0 chr5 70908599 70908897 -128721253 - AluSq SINE Alu -13 300 1 5581 132 89 55 chr5 70908897 70909196 -128720954 - Tigger3b DNA MER2_type -2740 288 1 1118 179 68 17 chr5 70909196 70909251 -128720899 + MER82 DNA MER2_type 175 253 -400 1869 166 7 10 chr5 70909474 70909781 -128720369 - AluJb SINE Alu -2 310 5 818 141 135 0 chr5 70909907 70910070 -128720080 - L1MD3 LINE L1 -67 7928 7744 1619 116 48 51 chr5 70910745 70910875 -128719275 + AluJo SINE Alu 6 135 -177 2419 63 10 7 chr5 70910875 70911175 -128718975 + AluY SINE Alu 1 301 -10 1619 116 48 51 chr5 70911175 70911336 -128718814 + AluJo SINE Alu 135 296 -16 1117 90 7 0 chr5 70911388 70911532 -128718618 + AluSq/x SINE Alu 1 145 -167 1884 163 17 0 chr5 70912346 70912640 -128717510 - AluJb SINE Alu -13 299 1 275 240 193 20 chr5 70912676 70912826 -128717324 + LTR33 LTR ERVL 342 517 -4 2297 82 7 7 chr5 70913064 70913358 -128716792 + AluY SINE Alu 1 294 -17 1960 135 40 10 chr5 70913370 70913667 -128716483 + AluSc SINE Alu 2 307 -2 1677 163 22 56 chr5 70914383 70914510 -128715640 + AluJb SINE Alu 4 134 -178 2178 129 0 0 chr5 70914510 70914804 -128715346 + AluSx SINE Alu 1 294 -18 1677 163 22 56 chr5 70914804 70914996 -128715154 + AluJb SINE Alu 134 312 0 2374 101 0 0 chr5 70915408 70915716 -128714434 + AluSg SINE Alu 1 308 -2 792 172 0 63 chr5 70915727 70915901 -128714249 + FRAM SINE Alu 1 163 -3 743 200 0 7 chr5 70916040 70916175 -128713975 - AluJb SINE Alu -38 274 141 897 134 29 2 chr5 70916188 70916347 -128713803 - L1PA12 LINE L1 -337 5831 5660 540 75 0 0 chr5 70916353 70916420 -128713730 - AluSp/q SINE Alu -22 291 225 406 292 143 29 chr5 70916430 70916846 -128713304 - L1MC4a LINE L1 -333 5788 5388 * 731 220 80 28 chr5 70916844 70917094 -128713056 + HAL1 LINE L1 1083 1345 -1162 639 229 0 0 chr5 70917099 70917230 -128712920 + FLAM_C SINE Alu 2 132 -11 2253 234 117 29 chr5 70917230 70918131 -128712019 + HAL1 LINE L1 1337 2316 -191 1673 188 27 0 chr5 70918178 70918471 -128711679 + AluJo SINE Alu 1 301 -11 2377 84 3 0 chr5 70918534 70918830 -128711320 - AluSq SINE Alu -12 301 5 2377 152 22 18 chr5 70918834 70919533 -128710617 - L1M3 LINE L1 -511 5669 4968 1899 179 31 11 chr5 70919534 70919990 -128710160 - MLT2B1 LTR ERVL -7 508 1 589 188 54 18 chr5 70919998 70920110 -128710040 - L1M3 LINE L1 -1176 4970 4855 2250 117 3 0 chr5 70920351 70920660 -128709490 + AluSx SINE Alu 1 310 -2 1423 118 212 12 chr5 70920829 70921084 -128709066 + AluSg1 SINE Alu 1 306 -3 1157 77 14 0 chr5 70921151 70921294 -128708856 + AluSp SINE Alu 15 159 -154 3295 165 27 57 chr5 70921930 70922599 -128707551 + L1MB7 LINE L1 5457 6104 -80 719 155 16 8 chr5 70922599 70922728 -128707422 - FLAM_C SINE Alu -1 132 3 3295 165 27 57 chr5 70922728 70922792 -128707358 + L1MB7 LINE L1 6104 6168 -16 325 206 98 0 chr5 70922792 70922884 -128707266 + L1MC4a LINE L1 5813 5913 -1895 4039 192 14 19 chr5 70923937 70924707 -128705443 + L1MB8 LINE L1 5276 6043 -135 2387 83 0 0 chr5 70924707 70924995 -128705155 - AluSg SINE Alu -18 292 5 4039 192 14 19 chr5 70924995 70925061 -128705089 + L1MB8 LINE L1 6043 6108 -70 249 127 218 0 chr5 70925108 70925163 -128704987 + L1MB8 LINE L1 6101 6167 -11 1890 151 0 7 chr5 70925169 70925460 -128704690 - AluJo SINE Alu -8 304 16 2237 100 0 13 chr5 70926232 70926533 -128703617 - AluY SINE Alu -14 297 1 1057 96 0 51 chr5 70926731 70926887 -128703263 - AluSg/x SINE Alu -80 230 83 647 177 43 0 chr5 70927355 70927496 -128702654 + MIR SINE MIR 52 198 -64 2531 73 0 3 chr5 70927808 70928110 -128702040 - AluY SINE Alu -10 301 1 2273 107 3 3 chr5 70928182 70928480 -128701670 - AluSq SINE Alu -14 299 2 315 0 0 0 chr5 70928992 70929027 -128701123 + (A)n Simple_repeat Simple_repeat 1 35 0 1766 193 129 14 chr5 70929406 70929825 -128700325 - MLT1C LTR MaLR 0 467 1 2011 101 6 89 chr5 70929895 70930222 -128699928 - AluSx SINE Alu -12 300 1 25 31 0 0 chr5 70930496 70930528 -128699622 + AT_rich Low_complexity Low_complexity 1 32 0 207 0 0 0 chr5 70930638 70930661 -128699489 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2020 158 0 0 chr5 70930682 70930974 -128699176 - AluSx SINE Alu -20 292 1 2121 123 0 25 chr5 70931017 70931333 -128698817 - AluSx SINE Alu -4 308 1 288 288 110 0 chr5 70931498 70931616 -128698534 + MIR SINE MIR 70 200 -62 1897 151 3 16 chr5 70931790 70932102 -128698048 + AluSx SINE Alu 1 308 -4 822 145 0 0 chr5 70932102 70932219 -128697931 + AluSg/x SINE Alu 134 250 -62 21 0 0 0 chr5 70932453 70932474 -128697676 + AT_rich Low_complexity Low_complexity 1 21 0 2186 105 0 3 chr5 70932483 70932792 -128697358 + AluSx SINE Alu 1 308 0 2377 90 3 0 chr5 70932794 70933095 -128697055 + AluY SINE Alu 1 302 -9 2023 94 33 11 chr5 70933169 70933473 -128696677 + AluSx SINE Alu 1 310 0 241 261 52 97 chr5 70934247 70934307 -128695843 - MIR SINE MIR -111 151 90 2213 100 3 13 chr5 70934307 70934607 -128695543 + AluSg SINE Alu 1 297 -13 241 261 52 97 chr5 70934607 70934680 -128695470 - MIR SINE MIR -172 90 24 1993 138 7 3 chr5 70934836 70935127 -128695023 - AluSg SINE Alu -18 292 1 262 266 32 11 chr5 70935170 70935264 -128694886 + MLT1L LTR MaLR 512 607 -8 1226 104 74 207 chr5 70935406 70935744 -128694406 - 7SLRNA srpRNA srpRNA -27 293 1 258 343 10 20 chr5 70935744 70935862 -128694288 - MIR SINE MIR -61 147 35 1558 152 26 26 chr5 70935928 70936197 -128693953 - AluJb SINE Alu -7 305 37 2247 114 0 0 chr5 70936211 70936538 -128693612 - AluY SINE Alu 0 311 1 183 42 0 0 chr5 70936540 70936564 -128693586 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2131 116 0 3 chr5 70936564 70936849 -128693301 - AluSx SINE Alu -28 284 1 21 0 0 0 chr5 70936858 70936879 -128693271 + AT_rich Low_complexity Low_complexity 1 21 0 975 174 0 0 chr5 70937021 70937170 -128692980 + AluSg/x SINE Alu 136 284 -26 2276 93 17 0 chr5 70937180 70937469 -128692681 + AluSx SINE Alu 1 294 -18 1410 119 0 68 chr5 70937469 70937704 -128692446 + AluSg/x SINE Alu 88 306 -6 1575 193 3 3 chr5 70937805 70938095 -128692055 - AluJb SINE Alu -18 294 5 545 172 38 24 chr5 70938101 70938309 -128691841 + L1M4 LINE L1 4854 5205 -941 824 181 0 26 chr5 70938347 70938502 -128691648 + FAM SINE Alu 1 42 -7 865 247 134 5 chr5 70938503 70938914 -128691236 + L1M4 LINE L1 3181 5330 -816 2086 138 0 3 chr5 70938931 70939236 -128690914 - AluSq SINE Alu -8 305 2 917 107 133 13 chr5 70939250 70939400 -128690750 - MSTA LTR MaLR -51 377 210 392 243 0 10 chr5 70939400 70939503 -128690647 + L1M4 LINE L1 3537 3638 -2508 2305 113 0 0 chr5 70939533 70939833 -128690317 + AluSx SINE Alu 1 300 -12 2128 124 3 0 chr5 70939872 70940162 -128689988 + AluSx SINE Alu 1 291 -21 2419 104 0 0 chr5 70940167 70940475 -128689675 + AluSg SINE Alu 1 308 -2 1072 173 0 0 chr5 70940476 70940644 -128689506 + AluSg/x SINE Alu 131 298 -14 1449 232 68 5 chr5 70940646 70941016 -128689134 + L1M4 LINE L1 4512 4904 -1242 220 98 20 39 chr5 70941016 70941067 -128689083 + (TTTTTG)n Simple_repeat Simple_repeat 2 51 0 1170 29 14 0 chr5 70941067 70941205 -128688945 - L1PA7 LINE L1 0 6154 6015 2882 163 14 40 chr5 70941205 70941275 -128688875 + L1M4 LINE L1 4889 4959 -1219 2286 116 3 0 chr5 70941275 70941586 -128688564 + AluSp SINE Alu 2 313 0 2882 163 14 40 chr5 70941586 70942427 -128687723 + L1M4 LINE L1 4959 5769 -409 2177 113 7 0 chr5 70942427 70942718 -128687432 - AluSx SINE Alu -19 293 1 2882 163 14 40 chr5 70942718 70942742 -128687408 + L1M4 LINE L1 5769 5792 -386 551 69 0 0 chr5 70942996 70943068 -128687082 - Alu SINE Alu -14 298 227 297 75 0 0 chr5 70943168 70943208 -128686942 + (GA)n Simple_repeat Simple_repeat 1 40 0 2185 108 7 0 chr5 70943473 70943769 -128686381 - AluSp SINE Alu -15 298 1 194 298 96 21 chr5 70944724 70944818 -128685332 + L2 LINE L2 3200 3300 -13 2161 112 0 3 chr5 70944857 70945151 -128684999 + AluSg SINE Alu 1 293 -17 1615 159 68 0 chr5 70945209 70945473 -128684677 + AluJo SINE Alu 1 282 -30 536 47 101 7 chr5 70945487 70945635 -128684515 + (TA)n Simple_repeat Simple_repeat 2 163 0 305 286 124 0 chr5 70945764 70945869 -128684281 + MIR SINE MIR 117 234 -28 2191 90 3 51 chr5 70946064 70946376 -128683774 - AluSq SINE Alu -16 297 1 2474 83 0 0 chr5 70946740 70947040 -128683110 - AluY SINE Alu -11 300 1 2263 118 0 13 chr5 70947517 70947832 -128682318 + AluSx SINE Alu 1 311 -1 2294 99 3 0 chr5 70948582 70948875 -128681275 + AluSg SINE Alu 1 294 -16 1363 112 6 0 chr5 70949155 70949333 -128680817 + AluSq SINE Alu 1 179 -134 286 132 0 0 chr5 70949461 70949514 -128680636 - AluSp/q SINE Alu -1 302 250 2251 113 0 3 chr5 70949616 70949917 -128680233 + AluSx SINE Alu 11 310 -2 232 136 15 76 chr5 70949920 70949986 -128680164 - L1ME4a LINE L1 0 6121 6060 1747 139 16 50 chr5 70950363 70950680 -128679470 + AluJo SINE Alu 1 306 -6 630 279 56 62 chr5 70950805 70951163 -128678987 + L2 LINE L2 2958 3313 0 2343 98 0 25 chr5 70951317 70951635 -128678515 + AluSx SINE Alu 1 310 -2 829 145 0 0 chr5 70952240 70952357 -128677793 + AluJ SINE Alu 1 117 -195 21 36 0 0 chr5 70952358 70952386 -128677764 + AT_rich Low_complexity Low_complexity 1 28 0 2171 100 3 10 chr5 70952386 70952676 -128677474 - AluSx SINE Alu -24 288 1 976 147 13 7 chr5 70952697 70952847 -128677303 + AluJ SINE Alu 118 268 -44 327 260 47 39 chr5 70952858 70952985 -128677165 - L1ME3A LINE L1 -4 6166 6039 527 294 57 6 chr5 70953016 70953193 -128676957 + MIR SINE MIR 3 188 -74 2272 92 3 0 chr5 70953218 70953524 -128676626 + AluSp SINE Alu 1 307 0 2419 95 3 0 chr5 70953527 70953833 -128676317 + AluSx SINE Alu 1 307 -5 1973 150 10 0 chr5 70953871 70954177 -128675973 + AluSx SINE Alu 2 310 -2 238 270 153 0 chr5 70954681 70954792 -128675358 - MIR SINE MIR -98 164 37 2500 80 3 0 chr5 70954846 70955148 -128675002 + AluSp SINE Alu 1 303 -10 1554 203 17 7 chr5 70955281 70955571 -128674579 + AluJo SINE Alu 1 293 -19 865 97 0 0 chr5 70955575 70955689 -128674461 + FLAM_C SINE Alu 5 118 -15 7142 57 1 0 chr5 70955939 70957394 -128672756 - L1PA8 LINE L1 -7 6165 4722 371 93 37 0 chr5 70957452 70957506 -128672644 - MSTB LTR MaLR 0 426 371 1907 126 65 0 chr5 70957535 70957812 -128672338 + AluSq SINE Alu 1 295 -18 2269 168 16 18 chr5 70958144 70958173 -128671977 - MSTB LTR MaLR -40 386 358 2441 94 0 0 chr5 70958173 70958482 -128671668 + AluSq SINE Alu 1 309 -4 2269 168 16 18 chr5 70958482 70958839 -128671311 - MSTB LTR MaLR -68 358 1 2190 155 15 35 chr5 70958983 70959383 -128670767 + LOR1b LTR ERV1 70 461 0 2426 84 3 3 chr5 70959479 70959790 -128670360 + AluY SINE Alu 1 311 0 454 278 151 45 chr5 70959888 70960240 -128669910 + MLT1K LTR MaLR 200 588 0 26 30 0 0 chr5 70960504 70960537 -128669613 + AT_rich Low_complexity Low_complexity 1 33 0 1668 153 0 0 chr5 70960543 70960784 -128669366 + AluSx SINE Alu 1 241 -71 6474 71 12 1 chr5 70960784 70961601 -128668549 - LTR12 LTR ERV1 0 826 1 360 145 0 0 chr5 70961603 70961665 -128668485 + AluSx SINE Alu 240 301 -1 1913 137 0 0 chr5 70961719 70961981 -128668169 + AluSg SINE Alu 1 262 -48 267 100 50 0 chr5 70962087 70962155 -128667995 + AluSg SINE Alu 243 312 0 1677 170 23 13 chr5 70962968 70963268 -128666882 + AluJb SINE Alu 1 303 -9 259 227 92 50 chr5 70963432 70963551 -128666599 + L3 LINE CR1 1307 1430 -147 35 63 0 0 chr5 70964446 70964509 -128665641 + AT_rich Low_complexity Low_complexity 1 63 0 2336 82 20 0 chr5 70964838 70965143 -128665007 + AluSx SINE Alu 1 311 -1 1415 193 57 18 chr5 70965559 70965839 -128664311 + AluJo SINE Alu 5 295 -17 2298 103 0 10 chr5 70965839 70966141 -128664009 - AluSq SINE Alu -14 299 1 275 307 73 40 chr5 70966205 70966355 -128663795 + MARNA DNA Mariner 22 176 -410 264 197 66 33 chr5 70967363 70967424 -128662726 - MER58 DNA MER1_type 0 2420 2358 1763 97 120 4 chr5 70967759 70968017 -128662133 - AluSg1 SINE Alu -21 288 1 1164 130 0 0 chr5 70968038 70968200 -128661950 - AluSg/x SINE Alu -15 297 136 2205 93 0 13 chr5 70968202 70968503 -128661647 - AluSx SINE Alu -15 297 1 259 100 0 24 chr5 70968503 70968550 -128661600 - Alu SINE Alu -260 40 1 189 0 0 0 chr5 70968566 70968587 -128661563 + (T)n Simple_repeat Simple_repeat 1 21 0 634 208 147 41 chr5 70968755 70968952 -128661198 - MER20 DNA MER1_type 0 219 2 1268 169 165 8 chr5 70969102 70969362 -128660788 + AluJb SINE Alu 1 301 -11 1692 152 22 14 chr5 70969549 70969826 -128660324 + AluJo SINE Alu 6 284 -28 2440 82 0 0 chr5 70970099 70970402 -128659748 + AluY SINE Alu 1 303 -8 1924 174 0 0 chr5 70970402 70970700 -128659450 + AluSx SINE Alu 1 298 -14 42 0 0 0 chr5 70970788 70970830 -128659320 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 70970940 70970961 -128659189 + AT_rich Low_complexity Low_complexity 1 21 0 285 109 0 0 chr5 70971545 70971591 -128658559 + (CAT)n Simple_repeat Simple_repeat 2 47 0 25 75 0 0 chr5 70972425 70972478 -128657672 + AT_rich Low_complexity Low_complexity 1 53 0 2012 96 0 0 chr5 70973362 70973612 -128656538 - AluSq SINE Alu -20 293 44 801 153 0 0 chr5 70973761 70973892 -128656258 + FLAM_C SINE Alu 1 131 -2 21 0 0 0 chr5 70975105 70975126 -128655024 + GC_rich Low_complexity Low_complexity 1 21 0 2110 76 83 7 chr5 70976232 70976520 -128653630 - AluSq SINE Alu -3 310 1 31 26 0 0 chr5 70977468 70977506 -128652644 + AT_rich Low_complexity Low_complexity 1 38 0 1807 166 7 0 chr5 70978495 70978785 -128651365 - AluJo SINE Alu -20 292 1 1624 142 93 19 chr5 70979293 70979561 -128650589 + AluJb SINE Alu 1 288 -24 234 0 0 0 chr5 70979561 70979587 -128650563 + (T)n Simple_repeat Simple_repeat 1 26 0 1650 154 58 14 chr5 70980717 70981009 -128649141 + AluJo SINE Alu 5 309 -3 21 0 0 0 chr5 70981386 70981407 -128648743 + AT_rich Low_complexity Low_complexity 1 21 0 732 265 55 110 chr5 70981409 70982347 -128647803 - L1MC4 LINE L1 -131 7911 7040 1292 133 9 24 chr5 70982347 70982558 -128647592 - L1MC1 LINE L1 0 6333 6126 732 265 55 110 chr5 70982558 70982621 -128647529 - L1MC4 LINE L1 -1002 7040 6975 2182 124 13 0 chr5 70982627 70982926 -128647224 - AluSx SINE Alu -9 303 1 1351 144 0 0 chr5 70983254 70983455 -128646695 + AluSg/x SINE Alu 110 310 0 325 81 32 32 chr5 70983457 70983519 -128646631 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 188 128 0 43 chr5 70984206 70984253 -128645897 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 716 124 10 0 chr5 70984296 70984393 -128645757 + FLAM_C SINE Alu 33 130 -13 2273 85 3 16 chr5 70984400 70984705 -128645445 + AluY SINE Alu 1 301 -10 1450 210 71 0 chr5 70985388 70985669 -128644481 + AluJo SINE Alu 1 301 -1 1870 129 86 0 chr5 70986008 70986288 -128643862 - AluSx SINE Alu -7 305 2 1776 144 20 30 chr5 70986560 70986893 -128643257 - AluJb SINE Alu 0 312 1 506 275 85 25 chr5 70986970 70987206 -128642944 + L1MC4 LINE L1 7178 7427 -615 2439 62 0 23 chr5 70987396 70987701 -128642449 - AluY SINE Alu -13 298 1 1933 141 3 10 chr5 70987708 70988012 -128642138 - AluSx SINE Alu -10 302 1 21 36 0 0 chr5 70988410 70988438 -128641712 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 70988783 70988804 -128641346 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 70988987 70989024 -128641126 + AT_rich Low_complexity Low_complexity 1 37 0 509 208 0 0 chr5 70989255 70989361 -128640789 - L1MB2 LINE L1 0 6171 6066 2010 131 3 0 chr5 70989368 70989666 -128640484 - AluJo SINE Alu -13 299 1 180 175 100 0 chr5 70989861 70989901 -128640249 + MIR SINE MIR 170 213 -49 2242 106 3 7 chr5 70990018 70990319 -128639831 + AluSq SINE Alu 1 300 -13 842 196 26 0 chr5 70990319 70990472 -128639678 + AluJo/FRAM SINE Alu 134 290 -22 523 223 25 50 chr5 70990513 70990634 -128639516 + FLAM_A SINE Alu 8 125 -17 1735 156 35 7 chr5 70991067 70991350 -128638800 - AluJo SINE Alu -21 291 1 26 64 0 0 chr5 70991428 70991475 -128638675 + AT_rich Low_complexity Low_complexity 1 47 0 666 284 58 14 chr5 70991823 70992031 -128638119 + MIR SINE MIR 34 250 -12 2144 102 14 0 chr5 70992094 70992379 -128637771 - AluY SINE Alu -22 289 1 26 64 0 0 chr5 70992381 70992428 -128637722 + AT_rich Low_complexity Low_complexity 1 47 0 245 256 61 0 chr5 70992634 70992716 -128637434 - MIR SINE MIR -32 230 144 661 149 149 50 chr5 70992808 70992929 -128637221 + FLAM_C SINE Alu 1 133 0 541 261 144 20 chr5 70992996 70993116 -128637034 + MIR SINE MIR 14 118 -144 1561 167 24 17 chr5 70993116 70993410 -128636740 + AluJo SINE Alu 1 296 -16 1952 110 67 3 chr5 70993410 70993692 -128636458 + AluSx SINE Alu 1 300 -12 541 261 144 20 chr5 70993692 70993765 -128636385 + MIR SINE MIR 117 232 -30 1125 175 67 14 chr5 70993797 70994020 -128636130 - MER46A DNA MER2_type 0 236 2 23 33 0 0 chr5 70994221 70994251 -128635899 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr5 70995458 70995484 -128634666 + AT_rich Low_complexity Low_complexity 1 26 0 813 176 0 61 chr5 70996163 70996311 -128633839 - FLAM_C SINE Alu 0 143 5 708 197 7 54 chr5 70996354 70996501 -128633649 - FLAM_A SINE Alu -2 140 1 1637 167 7 33 chr5 70996504 70996810 -128633340 - AluJb SINE Alu -14 298 1 1048 197 78 0 chr5 70996992 70997185 -128632965 - MER3 DNA MER1_type 0 209 2 1625 150 45 21 chr5 70997230 70997517 -128632633 + AluJb SINE Alu 1 294 -18 1612 205 3 3 chr5 70997681 70997988 -128632162 + AluJo SINE Alu 1 307 -5 1050 126 25 0 chr5 70997988 70998147 -128632003 + L1MA3 LINE L1 6143 6305 0 256 241 51 66 chr5 70998160 70998297 -128631853 - L1MC4 LINE L1 -44 7998 7864 405 62 0 0 chr5 70998393 70998441 -128631709 - Alu SINE Alu -263 48 1 181 140 0 40 chr5 70998471 70998521 -128631629 + (TTAA)n Simple_repeat Simple_repeat 1 48 0 288 175 48 0 chr5 70999016 70999079 -128631071 + L1MB7 LINE L1 6114 6179 -5 2271 106 6 3 chr5 70999272 70999584 -128630566 - AluSq SINE Alu 0 313 1 537 141 22 0 chr5 70999587 70999679 -128630471 - AluSg/x SINE Alu -3 306 213 742 154 0 0 chr5 70999780 70999890 -128630260 + FLAM_C SINE Alu 26 135 -8 259 81 0 0 chr5 70999949 70999986 -128630164 + L1MA8 LINE L1 6021 6057 -234 1376 122 16 63 chr5 71000024 71000109 -128630041 + L1MA8 LINE L1 6043 6130 -161 2350 81 0 0 chr5 71000109 71000407 -128629743 + AluY SINE Alu 1 298 -13 1376 122 16 63 chr5 71000407 71000576 -128629574 + L1MA8 LINE L1 6130 6285 -6 2193 111 0 3 chr5 71000798 71001096 -128629054 + AluSg SINE Alu 1 297 -13 198 0 0 0 chr5 71001142 71001164 -128628986 + (A)n Simple_repeat Simple_repeat 1 22 0 1011 126 0 50 chr5 71001166 71001325 -128628825 + AluJb SINE Alu 1 151 -161 852 214 62 19 chr5 71001330 71001540 -128628610 + AluJb SINE Alu 71 289 -23 456 263 125 13 chr5 71001554 71001706 -128628444 + MER102b DNA MER1_type 173 341 0 214 204 0 41 chr5 71001908 71001957 -128628193 + L2 LINE L2 3153 3199 -73 207 209 0 0 chr5 71002276 71002319 -128627831 + T-rich Low_complexity Low_complexity 2 44 0 1935 120 10 33 chr5 71002461 71002802 -128627348 - AluSc SINE Alu 0 309 1 2136 126 3 0 chr5 71002939 71003233 -128626917 + AluSx SINE Alu 1 295 -17 308 133 5 0 chr5 71003247 71003303 -128626847 + Alu SINE Alu 2 42 -259 2311 73 35 0 chr5 71003404 71003691 -128626459 + AluY SINE Alu 1 297 -14 2115 187 45 75 chr5 71003693 71004021 -128626129 - L1MD3 LINE L1 -29 8010 7719 780 164 0 57 chr5 71004021 71004161 -128625989 - FLAM_C SINE Alu -1 132 1 2115 187 45 75 chr5 71004161 71004429 -128625721 - L1MD3 LINE L1 -320 7719 7444 1784 147 3 51 chr5 71004660 71004974 -128625176 + AluJb SINE Alu 1 299 -13 1182 133 38 5 chr5 71005243 71005454 -128624696 + L1MA8 LINE L1 5112 5329 -817 1229 142 10 20 chr5 71005456 71005508 -128624642 + AluJb SINE Alu 85 136 -176 2245 108 0 3 chr5 71005508 71005814 -128624336 + AluSq SINE Alu 1 305 -8 1229 142 10 20 chr5 71005814 71005965 -128624185 + AluJb SINE Alu 136 286 -26 1410 144 54 36 chr5 71005965 71006243 -128623907 + L1MA8 LINE L1 5325 5607 -693 973 79 8 0 chr5 71006243 71006369 -128623781 + AluSg SINE Alu 1 127 -183 2363 99 3 0 chr5 71006406 71006709 -128623441 + AluSp SINE Alu 1 304 -9 3479 141 51 52 chr5 71006712 71006781 -128623369 + L1MA8 LINE L1 5600 5668 -623 2042 131 10 3 chr5 71006781 71007079 -128623071 + AluSx SINE Alu 1 300 -12 3479 141 51 52 chr5 71007079 71007521 -128622629 + L1MA8 LINE L1 5668 6112 -179 1853 164 0 20 chr5 71007521 71007825 -128622325 - AluJb SINE Alu -14 298 1 3479 141 51 52 chr5 71007825 71007999 -128622151 + L1MA8 LINE L1 6112 6285 -6 1928 120 0 0 chr5 71008018 71008277 -128621873 - AluSx SINE Alu -10 302 44 4714 193 119 21 chr5 71008431 71008583 -128621567 - L1M4 LINE L1 -4947 1908 1772 1939 125 87 0 chr5 71008583 71008870 -128621280 - AluSx SINE Alu 0 312 1 4714 193 119 21 chr5 71008870 71009525 -128620625 - L1M4 LINE L1 -5083 1772 1182 2224 118 10 3 chr5 71009525 71009831 -128620319 - AluSx SINE Alu -4 308 1 4714 193 119 21 chr5 71009831 71010379 -128619771 - L1M4 LINE L1 -5673 1182 407 955 228 94 40 chr5 71010385 71010661 -128619489 - L1M4 LINE L1 -6558 301 11 4762 158 40 0 chr5 71010689 71011497 -128618653 - L1MB2 LINE L1 -2 6169 5330 338 291 132 33 chr5 71011777 71011959 -128618191 - L3 LINE CR1 -1 1576 1377 324 0 0 0 chr5 71011990 71012026 -128618124 + (TA)n Simple_repeat Simple_repeat 1 36 0 2275 102 0 10 chr5 71012157 71012460 -128617690 + AluSq SINE Alu 1 300 -13 1263 80 0 6 chr5 71012982 71013145 -128617005 - AluY SINE Alu -10 301 140 2017 155 0 0 chr5 71013289 71013598 -128616552 - AluSx SINE Alu -3 309 1 317 309 120 69 chr5 71014750 71015126 -128615024 - L1M2 LINE L1 -5601 1248 854 22 0 0 0 chr5 71015139 71015161 -128614989 + GC_rich Low_complexity Low_complexity 1 22 0 695 213 25 35 chr5 71016310 71016512 -128613638 + L1MC5 LINE L1 7727 7926 -35 1462 239 73 33 chr5 71016563 71017192 -128612958 + L2 LINE L2 2608 3267 -46 1748 170 0 37 chr5 71017285 71017425 -128612725 + AluJo SINE Alu 1 145 -167 2420 77 14 0 chr5 71017425 71017722 -128612428 + AluY SINE Alu 1 301 -10 1748 170 0 37 chr5 71017722 71017905 -128612245 + AluJo SINE Alu 145 312 0 2161 119 7 7 chr5 71018677 71018987 -128611163 - AluSx SINE Alu 0 312 3 211 127 18 18 chr5 71020932 71020987 -128609163 + (TAA)n Simple_repeat Simple_repeat 3 57 0 921 160 0 0 chr5 71021394 71021525 -128608625 - FLAM_C SINE Alu -2 131 1 434 101 72 0 chr5 71021545 71021614 -128608536 - AluSc SINE Alu 0 309 236 7795 99 13 22 chr5 71021614 71022695 -128607455 + MER11C LTR ERVK 1 1071 0 1828 136 8 0 chr5 71022702 71022959 -128607191 - AluSx SINE Alu -53 259 1 195 42 0 0 chr5 71023003 71023027 -128607123 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1792 172 3 7 chr5 71023031 71023316 -128606834 - AluJb SINE Alu -22 290 7 1036 106 0 0 chr5 71023404 71023536 -128606614 - FLAM_C SINE Alu -11 132 1 2103 133 7 0 chr5 71024506 71024807 -128605343 + AluSx SINE Alu 1 303 -9 3222 14 0 0 chr5 71024820 71025164 -128604986 + L1PA2 LINE L1 5804 6147 -8 27 0 0 0 chr5 71025164 71025191 -128604959 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 71025339 71025360 -128604790 + AT_rich Low_complexity Low_complexity 1 21 0 2293 56 13 46 chr5 71025500 71025806 -128604344 - AluY SINE Alu -15 296 1 548 307 0 0 chr5 71025849 71025986 -128604164 + MIR SINE MIR 56 192 -70 25 65 0 0 chr5 71025997 71026043 -128604107 + AT_rich Low_complexity Low_complexity 1 46 0 408 20 0 0 chr5 71026085 71026134 -128604016 + (TTA)n Simple_repeat Simple_repeat 1 49 0 2320 75 0 0 chr5 71026134 71026412 -128603738 - AluSg SINE Alu -32 278 1 1240 152 71 14 chr5 71026526 71026737 -128603413 - AluJo SINE Alu -89 223 1 427 313 9 17 chr5 71026737 71026852 -128603298 + MIR SINE MIR 23 136 -126 24 0 0 0 chr5 71026891 71026915 -128603235 + AT_rich Low_complexity Low_complexity 1 24 0 920 102 0 15 chr5 71027178 71027315 -128602835 - AluSc SINE Alu -1 308 174 2164 114 3 0 chr5 71027612 71027902 -128602248 + AluSx SINE Alu 4 294 -18 22 0 0 0 chr5 71027979 71028001 -128602149 + AT_rich Low_complexity Low_complexity 1 22 0 1034 164 0 12 chr5 71029026 71029191 -128600959 + FRAM SINE Alu 1 163 -3 1108 176 11 0 chr5 71029220 71029408 -128600742 - AluJb SINE Alu -4 308 119 552 163 0 0 chr5 71029408 71029488 -128600662 + AluS SINE Alu 2 81 -231 386 88 6 147 chr5 71232798 71232968 -128397182 + L1P LINE L1 2997 3142 -3004 29 47 0 0 chr5 71238486 71238529 -128391621 + AT_rich Low_complexity Low_complexity 1 43 0 614 122 0 11 chr5 71238529 71238619 -128391531 - AluSg/x SINE Alu -22 288 200 672 141 0 221 chr5 71238709 71238922 -128391228 - AluSx SINE Alu -145 167 2 2207 107 0 7 chr5 71239268 71239567 -128390583 - AluSx SINE Alu -14 298 2 1548 142 25 33 chr5 71239568 71239968 -128390182 - L1P4 LINE L1 -676 5485 5101 16101 47 14 3 chr5 71240202 71242607 -128387543 + L1P2 LINE L1 3323 5751 -403 9762 28 20 2 chr5 71242707 71243941 -128386209 - L1P LINE L1 -788 5358 4102 28 48 0 0 chr5 71246012 71246054 -128384096 + AT_rich Low_complexity Low_complexity 1 42 0 2183 121 7 0 chr5 71246409 71246714 -128383436 + AluSq SINE Alu 3 309 -4 778 94 8 8 chr5 71246714 71246841 -128383309 + (TA)n Simple_repeat Simple_repeat 2 128 0 417 243 65 19 chr5 71247190 71247297 -128382853 - Tigger3(Golem) DNA MER2_type 0 3029 2918 * 441 258 0 0 chr5 71247288 71247385 -128382765 - Tigger3(Golem) DNA MER2_type -2931 98 2 7040 28 0 1 chr5 71247555 71248719 -128381431 - L1PA3 LINE L1 -434 5721 4559 3688 25 9 2 chr5 71248719 71249147 -128381003 + L1PA3 LINE L1 5721 6155 0 24 0 0 0 chr5 71249714 71249738 -128380412 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr5 71250415 71250443 -128379707 + AT_rich Low_complexity Low_complexity 1 28 0 639 168 40 0 chr5 71251103 71251228 -128378922 - L1PA13 LINE L1 -1 6162 6033 709 249 24 24 chr5 71251418 71251623 -128378527 - MER20 DNA MER1_type -7 212 8 580 214 7 71 chr5 71251982 71252136 -128378014 + MER20 DNA MER1_type 24 167 -52 2376 60 3 13 chr5 71252449 71252751 -128377399 + AluY SINE Alu 1 299 -12 586 211 34 46 chr5 71254081 71254256 -128375894 - MER104 DNA Tc2 -1 179 7 3247 222 75 23 chr5 71254320 71254810 -128375340 - L1MC3 LINE L1 -666 7119 6656 1896 172 123 5 chr5 71254810 71255193 -128374957 - MSTA LTR MaLR 0 428 1 3247 222 75 23 chr5 71255193 71255627 -128374523 - L1MC3 LINE L1 -1129 6656 6147 2537 191 47 2 chr5 71255779 71256307 -128373843 - L1PB4 LINE L1 -1 6857 6306 1867 222 14 69 chr5 71256307 71256823 -128373327 - L1PB4 LINE L1 -3456 3392 2949 2214 128 0 0 chr5 71256823 71257128 -128373022 - AluSg SINE Alu -5 305 1 1867 222 14 69 chr5 71257128 71257529 -128372621 - L1PB4 LINE L1 -3899 2949 2528 274 273 0 0 chr5 71257607 71257695 -128372455 - MIR SINE MIR -75 187 100 30 0 0 0 chr5 71258050 71258080 -128372070 + AT_rich Low_complexity Low_complexity 1 30 0 222 302 94 9 chr5 71259358 71259464 -128370686 - L2 LINE L2 0 3272 3158 21 0 0 0 chr5 71259859 71259880 -128370270 + AT_rich Low_complexity Low_complexity 1 21 0 298 378 34 21 chr5 71260283 71260574 -128369576 - L2 LINE L2 -1042 2272 1978 523 300 13 0 chr5 71261800 71261950 -128368200 + MLT1F LTR MaLR 16 167 -400 1423 187 40 49 chr5 71262158 71262250 -128367900 + MLT1A1 LTR MaLR 43 134 -231 2058 120 0 28 chr5 71262250 71262582 -128367568 - AluSg SINE Alu 0 324 1 1423 187 40 49 chr5 71262582 71262814 -128367336 + MLT1A1 LTR MaLR 134 365 0 656 208 106 51 chr5 71262814 71263014 -128367136 + MLT1F LTR MaLR 333 626 0 954 191 77 0 chr5 71263512 71263577 -128366573 - MER3 DNA MER1_type 0 209 150 2468 66 0 7 chr5 71263577 71263882 -128366268 + AluY SINE Alu 1 303 -8 954 191 77 0 chr5 71263882 71264010 -128366140 - MER3 DNA MER1_type -59 150 1 1627 210 13 56 chr5 71264030 71264098 -128366052 - MLT1A2 LTR MaLR 0 374 305 1967 158 30 0 chr5 71264098 71264401 -128365749 + AluSx SINE Alu 1 312 0 1627 210 13 56 chr5 71264401 71264678 -128365472 - MLT1A2 LTR MaLR -69 305 45 2444 66 3 13 chr5 71264678 71264982 -128365168 - AluY SINE Alu -10 301 1 1627 210 13 56 chr5 71264982 71265026 -128365124 - MLT1A2 LTR MaLR -329 45 1 23 33 0 0 chr5 71265257 71265287 -128364863 + AT_rich Low_complexity Low_complexity 1 30 0 1266 127 91 0 chr5 71265303 71265524 -128364626 - L1MA6 LINE L1 -4 6296 6056 1719 157 80 0 chr5 71265524 71265824 -128364326 - MER2 DNA MER2_type -21 324 1 268 240 115 19 chr5 71265830 71265934 -128364216 - L2 LINE L2 -96 3217 3104 21 0 0 0 chr5 71266370 71266391 -128363759 + AT_rich Low_complexity Low_complexity 1 21 0 623 154 0 0 chr5 71271266 71271370 -128358780 + AluSp/q SINE Alu 210 313 0 703 192 15 0 chr5 71271370 71271500 -128358650 + FLAM_C SINE Alu 1 132 -1 1264 128 49 5 chr5 71271509 71271712 -128358438 - THE1B LTR MaLR -150 214 3 9850 101 60 47 chr5 71271719 71273272 -128356878 - THE1B-int LTR MaLR -6 1574 2 2328 123 25 6 chr5 71273273 71273630 -128356520 - THE1B LTR MaLR 0 364 1 461 244 50 8 chr5 71273729 71273848 -128356302 - MLT1G1 LTR MaLR -456 139 16 957 157 16 54 chr5 71273909 71274094 -128356056 + FAM SINE Alu 1 49 0 2067 216 78 65 chr5 71274752 71275210 -128354940 - MER82 DNA MER2_type 0 653 185 2089 110 0 58 chr5 71275210 71275518 -128354632 - AluSx SINE Alu -22 290 1 2067 216 78 65 chr5 71275518 71275627 -128354523 - MER82 DNA MER2_type -468 185 79 2256 101 0 7 chr5 71275849 71276147 -128354003 - AluSx SINE Alu -15 297 2 1558 109 23 0 chr5 71276148 71276467 -128353683 - L1P4 LINE L1 -676 5485 5161 1817 130 7 7 chr5 71276988 71277257 -128352893 + AluSx SINE Alu 39 307 -5 2311 104 0 0 chr5 71277291 71277588 -128352562 + AluSg SINE Alu 1 297 -13 303 93 0 0 chr5 71278033 71278076 -128352074 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1533 157 39 57 chr5 71278083 71278234 -128351916 - AluJo SINE Alu -37 275 130 1990 138 10 0 chr5 71278234 71278524 -128351626 + AluSx SINE Alu 1 293 -19 1533 157 39 57 chr5 71278524 71278652 -128351498 - AluJo SINE Alu -182 130 1 1895 125 7 24 chr5 71279477 71279788 -128350362 + AluSx SINE Alu 1 306 0 206 257 191 19 chr5 71279838 71279943 -128350207 + L2 LINE L2 2938 3060 -212 1560 167 43 46 chr5 71280013 71280194 -128349956 - AluJo SINE Alu -7 305 124 1847 119 17 34 chr5 71280194 71280489 -128349661 - AluSg SINE Alu -20 290 1 703 154 106 0 chr5 71280489 71280612 -128349538 - AluJo SINE Alu -175 137 2 280 114 0 0 chr5 71281010 71281054 -128349096 + (T)n Simple_repeat Simple_repeat 1 180 0 2017 145 3 0 chr5 71281054 71281365 -128348785 - AluSx SINE Alu 0 356 1 847 102 0 0 chr5 71281685 71281803 -128348347 - FLAM_C SINE Alu -15 118 1 275 211 0 0 chr5 71281961 71282018 -128348132 - MIR3 SINE MIR -5 203 147 228 274 98 39 chr5 71282010 71282112 -128348038 - MER5A DNA MER1_type -8 181 74 * 1834 165 10 13 chr5 71282112 71282421 -128347729 - AluJo SINE Alu -4 308 1 1225 129 0 0 chr5 71282431 71282602 -128347548 - AluSg/x SINE Alu -3 309 139 451 149 92 23 chr5 71282602 71282689 -128347461 + AluSg/x SINE Alu 197 289 -23 251 163 0 20 chr5 71283038 71283087 -128347063 - FLAM SINE Alu 0 133 86 1132 143 5 35 chr5 71283087 71283290 -128346860 - AluJo SINE Alu -92 220 24 1015 174 60 20 chr5 71283949 71284014 -128346136 - MER3 DNA MER1_type 0 209 148 2379 71 0 0 chr5 71284014 71284311 -128345839 + AluY SINE Alu 1 297 -14 1015 174 60 20 chr5 71284311 71284446 -128345704 - MER3 DNA MER1_type -61 148 1 1517 217 14 35 chr5 71284466 71284536 -128345614 - MLT1A2 LTR MaLR 0 374 304 1977 149 30 0 chr5 71284536 71284837 -128345313 + AluSx SINE Alu 3 312 0 1517 217 14 35 chr5 71284837 71285111 -128345039 - MLT1A2 LTR MaLR -70 304 37 1162 249 3 16 chr5 71285115 71285420 -128344730 - AluY SINE Alu -10 301 1 245 171 0 0 chr5 71285423 71285464 -128344686 - MLT1A2 LTR MaLR -333 41 1 24 91 0 0 chr5 71285534 71285600 -128344550 + AT_rich Low_complexity Low_complexity 1 66 0 26 30 0 0 chr5 71285638 71285671 -128344479 + AT_rich Low_complexity Low_complexity 1 33 0 305 254 0 162 chr5 71286611 71286784 -128343366 - L2 LINE L2 -4 3309 3165 374 69 17 0 chr5 71287296 71287354 -128342796 + (CA)n Simple_repeat Simple_repeat 1 59 0 524 342 26 0 chr5 71287657 71287891 -128342259 - LTR16A LTR ERVL -184 266 27 23 78 0 0 chr5 71289266 71289317 -128340833 + AT_rich Low_complexity Low_complexity 1 51 0 29 0 0 0 chr5 71289644 71289673 -128340477 + AT_rich Low_complexity Low_complexity 1 29 0 3591 39 0 0 chr5 71289826 71290258 -128339892 - L1PA3 LINE L1 -3 6152 5721 6893 26 0 0 chr5 71290258 71291417 -128338733 + L1PA3 LINE L1 4563 5721 -434 443 258 0 0 chr5 71291587 71291684 -128338466 + Tigger3(Golem) DNA MER2_type 2 98 -2931 394 262 0 0 chr5 71291697 71291781 -128338369 + Tigger3(Golem) DNA MER2_type 2944 3027 -2 708 92 17 8 chr5 71292127 71292247 -128337903 + (TA)n Simple_repeat Simple_repeat 2 122 0 2083 122 7 0 chr5 71292247 71292541 -128337609 - AluSq SINE Alu -15 298 3 28 48 0 0 chr5 71292891 71292933 -128337217 + AT_rich Low_complexity Low_complexity 1 42 0 1325 210 53 11 chr5 71294078 71294359 -128335791 - AluJo SINE Alu -19 293 1 322 119 0 60 chr5 71295671 71295738 -128334412 + MADE1 DNA Mariner 1 63 -17 267 291 169 38 chr5 71295902 71296163 -128333987 - MLT1J LTR MaLR -210 301 7 305 254 0 162 chr5 71298237 71298410 -128331740 - L2 LINE L2 -4 3309 3165 347 73 18 0 chr5 71298922 71298977 -128331173 + (CA)n Simple_repeat Simple_repeat 1 56 0 524 342 26 0 chr5 71299281 71299515 -128330635 - LTR16A LTR ERVL -184 266 27 23 78 0 0 chr5 71300890 71300941 -128329209 + AT_rich Low_complexity Low_complexity 1 51 0 29 0 0 0 chr5 71301268 71301297 -128328853 + AT_rich Low_complexity Low_complexity 1 29 0 6125 39 0 1 chr5 71301450 71302190 -128327960 - L1PA3 LINE L1 -3 6152 5414 10729 35 0 0 chr5 71302190 71303493 -128326657 + L1PA3 LINE L1 4101 5403 -743 236 366 102 14 chr5 71304028 71304244 -128325906 + L2 LINE L2 2029 2263 -1051 989 153 98 86 chr5 71305025 71305280 -128324870 - Tigger2 DNA MER2_type -10 2708 2451 3742 184 38 0 chr5 71305334 71306064 -128324086 - Tigger2 DNA MER2_type -1959 759 2 1323 271 97 82 chr5 71306162 71307668 -128322482 + MER110-int LTR ERV1 1952 3590 -1057 735 241 56 14 chr5 71307875 71308091 -128322059 + MLT1D LTR MaLR 1 225 -280 286 170 0 0 chr5 71308132 71308179 -128321971 + MLT1A2 LTR MaLR 1 47 -327 366 301 0 0 chr5 71308233 71308336 -128321814 + MLT1A2 LTR MaLR 58 160 -214 960 180 11 26 chr5 71308410 71308599 -128321551 + MLT1A2 LTR MaLR 189 374 0 * 967 270 9 0 chr5 71308599 71308828 -128321322 + MLT1D LTR MaLR 275 505 0 641 199 112 23 chr5 71308966 71309186 -128320964 - MER33 DNA MER1_type -98 226 1 452 329 43 10 chr5 71309391 71309598 -128320552 + MER110 LTR ERV1 242 455 -36 1187 187 154 3 chr5 71310118 71310351 -128319799 + MER47A DNA MER2_type 1 292 -2031 12508 59 12 1 chr5 71310351 71312739 -128317411 - L1PA6 LINE L1 -4 6150 3742 1187 187 154 3 chr5 71312739 71312810 -128317340 + MER47A DNA MER2_type 292 351 -15 441 0 0 0 chr5 71312881 71312930 -128317220 + (CA)n Simple_repeat Simple_repeat 2 50 0 1814 144 158 13 chr5 71313702 71314076 -128316074 + MSTA LTR MaLR 1 428 0 8971 158 8 34 chr5 71314078 71315698 -128314452 + MSTA-int LTR MaLR 3 1580 0 1690 174 130 18 chr5 71315698 71316082 -128314068 + MSTA LTR MaLR 1 427 -1 1415 265 51 13 chr5 71316526 71316979 -128313171 - MLT1D LTR MaLR 0 505 36 286 328 9 17 chr5 71317247 71317363 -128312787 + MIR SINE MIR 124 238 -24 736 278 28 9 chr5 71318558 71318770 -128311380 + MER20 DNA MER1_type 2 217 -2 216 97 0 0 chr5 71318808 71318839 -128311311 + (T)n Simple_repeat Simple_repeat 1 31 0 1051 110 7 0 chr5 71319533 71319678 -128310472 + AluSg/x SINE Alu 149 294 -16 1982 133 3 16 chr5 71319827 71320144 -128310006 - AluSq SINE Alu 0 313 1 22 56 0 0 chr5 71320668 71320704 -128309446 + AT_rich Low_complexity Low_complexity 1 36 0 409 362 68 10 chr5 71320837 71321044 -128309106 + L1PA16 LINE L1 792 1010 -6564 11198 233 26 45 chr5 71321168 71324899 -128305251 + L1PA16 LINE L1 2182 5981 -1623 1092 179 147 62 chr5 71324899 71325172 -128304978 + AluJo SINE Alu 2 297 -5 11198 233 26 45 chr5 71325172 71326137 -128304013 + L1PA16 LINE L1 5981 6757 -847 1828 80 19 89 chr5 71326137 71326451 -128303699 + L1PA10 LINE L1 5876 6167 -1 11198 233 26 45 chr5 71326451 71327182 -128302968 + L1PA16 LINE L1 6757 7500 -104 1983 197 109 46 chr5 71327582 71328504 -128301646 - pTR5 LTR ERV1 -259 2179 924 682 183 44 48 chr5 71328483 71328734 -128301416 - pTR5 LTR ERV1 -1446 992 743 * 432 335 60 4 chr5 71329101 71329367 -128300783 - MER110 LTR ERV1 -26 465 185 256 208 20 119 chr5 71329440 71329541 -128300609 - MER110A LTR ERV1 -298 170 80 283 58 0 39 chr5 71329745 71329797 -128300353 + (TG)n Simple_repeat Simple_repeat 2 51 0 297 0 0 0 chr5 71330749 71330776 -128299374 + (TG)n Simple_repeat Simple_repeat 1 60 0 297 0 0 0 chr5 71330776 71330809 -128299341 + (TG)n Simple_repeat Simple_repeat 2 34 0 21 0 0 0 chr5 71331551 71331572 -128298578 + AT_rich Low_complexity Low_complexity 1 21 0 24 96 0 0 chr5 71331991 71332064 -128298086 + AT_rich Low_complexity Low_complexity 1 73 0 332 333 60 47 chr5 71333279 71333654 -128296496 + L1ME LINE L1 4348 4722 -1424 239 298 76 66 chr5 71333896 71334472 -128295678 + L1ME LINE L1 5340 5918 -252 408 319 108 32 chr5 71334647 71334926 -128295224 + L1MC/D LINE L1 5296 5595 -2213 333 68 0 0 chr5 71335532 71335576 -128294574 + (CA)n Simple_repeat Simple_repeat 1 44 0 237 215 15 15 chr5 71335583 71335648 -128294502 + (TA)n Simple_repeat Simple_repeat 1 65 0 189 0 0 0 chr5 71335668 71335689 -128294461 + (CA)n Simple_repeat Simple_repeat 2 22 0 1993 139 7 3 chr5 71335985 71336294 -128293856 + AluSx SINE Alu 1 310 -2 23 0 0 0 chr5 71336840 71336863 -128293287 + AT_rich Low_complexity Low_complexity 1 23 0 1354 269 92 43 chr5 71337095 71337725 -128292425 + L1ME2 LINE L1 3855 4562 -1584 2470 141 24 12 chr5 71337725 71338144 -128292006 + MSTA LTR MaLR 5 428 0 1354 269 92 43 chr5 71338144 71338602 -128291548 + L1ME2 LINE L1 4562 4996 -1150 26 82 0 0 chr5 71338782 71338843 -128291307 + AT_rich Low_complexity Low_complexity 1 61 0 809 238 176 27 chr5 71338898 71339272 -128290878 + L1ME2 LINE L1 5329 5758 -406 545 216 173 22 chr5 71339277 71339462 -128290688 - MER20 DNA MER1_type -6 213 1 594 256 56 34 chr5 71339475 71339741 -128290409 + L1ME2 LINE L1 5768 6039 -125 306 289 19 0 chr5 71339734 71339838 -128290312 + L1MA10 LINE L1 6225 6330 -4 * 525 251 101 22 chr5 71339842 71339985 -128290165 + LTR37B LTR ERV1 221 390 -78 1225 236 37 68 chr5 71339985 71340467 -128289683 - MLT1C LTR MaLR 0 467 1 525 251 101 22 chr5 71340467 71340550 -128289600 + LTR37B LTR ERV1 390 465 -3 405 222 62 25 chr5 71340784 71340946 -128289204 - L1M4 LINE L1 -2163 3983 3816 31 68 0 0 chr5 71341023 71341082 -128289068 + AT_rich Low_complexity Low_complexity 1 59 0 29 78 0 0 chr5 71341745 71341809 -128288341 + AT_rich Low_complexity Low_complexity 1 64 0 38 39 0 0 chr5 71341913 71341965 -128288185 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr5 71342044 71342066 -128288084 + AT_rich Low_complexity Low_complexity 1 22 0 206 300 0 0 chr5 71342944 71342994 -128287156 - MER5A DNA MER1_type -87 102 53 945 149 8 115 chr5 71343928 71344163 -128285987 - MER2 DNA MER2_type -135 210 1 232 246 132 53 chr5 71344796 71344910 -128285240 + L2 LINE L2 3158 3280 -33 204 354 0 0 chr5 71345422 71345583 -128284567 + T-rich Low_complexity Low_complexity 1 161 0 307 317 36 24 chr5 71345930 71346097 -128284053 - L1MEc LINE L1 -4709 1687 1519 40 21 0 0 chr5 71347916 71347963 -128282187 + AT_rich Low_complexity Low_complexity 1 47 0 240 212 0 0 chr5 71348006 71348072 -128282078 + T-rich Low_complexity Low_complexity 2 67 0 247 353 32 19 chr5 71348326 71348482 -128281668 + L2 LINE L2 2431 2588 -726 412 301 92 66 chr5 71349579 71349728 -128280422 - MER65A LTR ERV1 -9 436 292 6121 93 1 19 chr5 71349728 71351291 -128278859 + L1PA8A LINE L1 4592 6131 0 412 301 92 66 chr5 71351291 71351566 -128278584 - MER65A LTR ERV1 -153 292 1 3003 264 68 48 chr5 71351566 71353236 -128276914 - MER65A-int LTR ERV1 0 4871 3355 2051 201 45 29 chr5 71353218 71353775 -128276375 - MER41-int LTR ERV1 -1112 3824 3259 * 1279 82 39 0 chr5 71354283 71354465 -128275685 + L1PB1 LINE L1 5600 5788 -363 420 191 0 0 chr5 71354472 71354556 -128275594 + (TATATG)n Simple_repeat Simple_repeat 3 86 0 2650 100 0 0 chr5 71354558 71354927 -128275223 + L1PB1 LINE L1 5782 6150 -1 1651 6 0 0 chr5 71355129 71355310 -128274840 + AluYa5 SINE Alu 131 311 0 1336 165 113 119 chr5 71357664 71358264 -128271886 - MER41-int LTR ERV1 -1755 4576 2611 5642 107 33 9 chr5 71358283 71359153 -128270997 - L1PA15 LINE L1 0 6165 5275 1741 289 48 47 chr5 71359155 71359900 -128270250 - L1PA12 LINE L1 -6834 747 2 821 221 74 118 chr5 71359907 71360503 -128269647 - MER41-int LTR ERV1 -1697 3183 2329 604 258 69 68 chr5 71360479 71361169 -128268981 - MER41-int LTR ERV1 -2943 2980 2292 * 192 77 0 0 chr5 71361169 71361195 -128268955 + (CA)n Simple_repeat Simple_repeat 2 27 0 604 258 69 68 chr5 71361195 71361468 -128268682 - MER41-int LTR ERV1 -3631 2292 1150 292 196 196 9 chr5 71361508 71361620 -128268530 - MER34C LTR ERV1 -293 292 160 391 192 40 30 chr5 71361622 71361721 -128268429 - MER41-int LTR ERV1 -4133 990 891 689 286 95 43 chr5 71362053 71362183 -128267967 - MER65A LTR ERV1 0 445 323 2045 131 150 5 chr5 71362183 71362557 -128267593 - MSTA LTR MaLR 0 428 1 689 286 95 43 chr5 71362557 71362849 -128267301 - MER65A LTR ERV1 -122 323 1 2196 115 3 0 chr5 71362909 71363213 -128266937 + AluSp SINE Alu 1 305 -8 566 252 93 39 chr5 71363934 71364192 -128265958 + MER20B DNA MER1_type 234 505 -278 243 0 0 0 chr5 71364408 71364435 -128265715 + (TG)n Simple_repeat Simple_repeat 2 28 0 1958 143 32 40 chr5 71364528 71364906 -128265244 - THE1C LTR MaLR 0 375 1 1824 182 102 8 chr5 71364938 71365329 -128264821 + MSTA LTR MaLR 1 428 0 590 214 201 68 chr5 71365399 71365790 -128264360 + MER31B LTR ERV1 1 514 0 243 348 35 17 chr5 71365936 71366051 -128264099 + HAL1 LINE L1 348 464 -2043 196 325 169 45 chr5 71366183 71366675 -128263475 - L2 LINE L2 -1651 1663 1111 249 33 0 0 chr5 71366713 71366743 -128263407 + (GA)n Simple_repeat Simple_repeat 1 30 0 800 248 53 10 chr5 71366776 71366982 -128263168 - MER58A DNA MER1_type -6 218 4 323 236 166 57 chr5 71367041 71367198 -128262952 + MER5B DNA MER1_type 5 178 0 231 306 72 9 chr5 71367250 71367361 -128262789 - L2 LINE L2 -2343 971 854 1127 251 133 41 chr5 71367414 71367932 -128262218 + MLT1F1 LTR MaLR 3 565 -2 32 91 0 0 chr5 71369331 71369419 -128260731 + AT_rich Low_complexity Low_complexity 1 88 0 181 312 46 46 chr5 71369422 71369499 -128260651 - MIR SINE MIR -82 180 101 1961 138 7 0 chr5 71369499 71369796 -128260354 + AluSx SINE Alu 1 299 -13 181 312 46 46 chr5 71369796 71369827 -128260323 - MIR SINE MIR -160 102 72 199 288 15 30 chr5 71370293 71370359 -128259791 - MER5B DNA MER1_type -108 70 6 941 307 60 19 chr5 71370365 71370795 -128259355 - MLT1J LTR MaLR -60 451 4 22 0 0 0 chr5 71371131 71371153 -128258997 + AT_rich Low_complexity Low_complexity 1 22 0 2140 42 0 4 chr5 71371159 71371424 -128258726 - L1PA5 LINE L1 -293 5861 5598 2254 76 0 0 chr5 71371424 71371724 -128258426 + L1PA5 LINE L1 5853 6154 0 219 307 68 23 chr5 71371810 71371898 -128258252 - MER5B DNA MER1_type -35 143 52 22 70 0 0 chr5 71373234 71373277 -128256873 + AT_rich Low_complexity Low_complexity 1 43 0 2154 101 0 19 chr5 71373594 71373910 -128256240 + AluSg SINE Alu 1 310 0 936 288 69 20 chr5 71374222 71374614 -128255536 - L1ME1 LINE L1 -5 6441 6031 373 114 45 11 chr5 71374652 71374740 -128255410 + (TA)n Simple_repeat Simple_repeat 1 91 0 337 227 65 141 chr5 71374745 71375102 -128255048 - L1ME1 LINE L1 -1425 5001 4618 1738 193 52 37 chr5 71375102 71375309 -128254841 + LTR57 LTR ERVL 1 203 -208 2324 67 0 0 chr5 71375309 71375588 -128254562 + AluY SINE Alu 1 279 -32 189 0 0 0 chr5 71375588 71375609 -128254541 + (GAAAA)n Simple_repeat Simple_repeat 3 23 0 1149 29 0 0 chr5 71375609 71375746 -128254404 + (GGAAA)n Simple_repeat Simple_repeat 2 138 0 2324 67 0 0 chr5 71375746 71375763 -128254387 + AluY SINE Alu 277 298 -13 1738 193 52 37 chr5 71375763 71375960 -128254190 + LTR57 LTR ERVL 203 411 0 337 227 65 141 chr5 71375960 71376267 -128253883 - L1ME1 LINE L1 -1808 4618 4388 429 299 96 46 chr5 71376356 71376680 -128253470 - L1ME1 LINE L1 -4994 1432 1093 1277 219 10 10 chr5 71377004 71377292 -128252858 - AluJo SINE Alu -24 288 1 21 82 0 0 chr5 71377421 71377470 -128252680 + AT_rich Low_complexity Low_complexity 1 49 0 30 0 0 0 chr5 71378477 71378507 -128251643 + AT_rich Low_complexity Low_complexity 1 30 0 2762 7 0 0 chr5 71378642 71378946 -128251204 - AluYa5 SINE Alu -7 304 1 219 170 0 0 chr5 71379603 71379650 -128250500 + (TA)n Simple_repeat Simple_repeat 1 47 0 205 227 0 30 chr5 71381010 71381076 -128249074 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 616 222 186 63 chr5 71382567 71382688 -128247462 + MLT1A2 LTR MaLR 1 106 -268 281 80 0 20 chr5 71382688 71382738 -128247412 + (TC)n Simple_repeat Simple_repeat 2 50 0 616 222 186 63 chr5 71382738 71382900 -128247250 + MLT1A2 LTR MaLR 106 374 0 267 109 254 0 chr5 71383425 71383480 -128246670 + HERVK3 LTR ERVK 150 218 -7025 577 249 99 15 chr5 71383544 71383745 -128246405 + HERVK3 LTR ERVK 55 272 -6971 4578 162 31 42 chr5 71383887 71385237 -128244913 + HERVK3 LTR ERVK 1321 5561 -384 715 163 22 7 chr5 71385237 71385372 -128244778 + LTR3b LTR ERVK 317 453 -47 6111 56 0 0 chr5 71386108 71386862 -128243288 - L1PA6 LINE L1 -14 6140 5387 1496 205 0 0 chr5 71388034 71388293 -128241857 - AluSq SINE Alu -54 259 1 262 270 27 0 chr5 71388785 71388859 -128241291 + MLT1J2 LTR MaLR 1 76 -374 531 267 82 31 chr5 71388949 71389144 -128241006 + MLT1J2 LTR MaLR 240 444 -6 414 0 0 0 chr5 71390362 71390408 -128239742 + (CA)n Simple_repeat Simple_repeat 1 46 0 2272 116 0 0 chr5 71391767 71392068 -128238082 + AluSg SINE Alu 1 301 -9 287 182 104 13 chr5 71393023 71393100 -128237050 + MER89 LTR ERV1 1 84 -475 * 1635 210 14 19 chr5 71393088 71393455 -128236695 + MER89 LTR ERV1 195 559 0 1053 178 17 0 chr5 71395124 71395298 -128234852 - AluJb SINE Alu -19 293 117 1889 145 6 39 chr5 71395364 71395675 -128234475 + AluSx SINE Alu 1 301 -11 479 255 129 70 chr5 71395881 71396167 -128233983 + Charlie2 DNA MER1_type 15 317 -2545 912 236 157 20 chr5 71396182 71396235 -128233915 + Charlie2 DNA MER1_type 1861 1905 -957 216 0 0 0 chr5 71396235 71396259 -128233891 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 912 236 157 20 chr5 71396259 71396607 -128233543 + Charlie2 DNA MER1_type 1905 2317 -545 3307 59 9 2 chr5 71396976 71397402 -128232748 - L1PA8 LINE L1 -3 6169 5741 2025 104 59 0 chr5 71399087 71399376 -128230774 + AluSq SINE Alu 1 306 -7 330 248 67 29 chr5 71401098 71401203 -128228947 + MIR SINE MIR 82 190 -72 658 266 124 12 chr5 71402610 71402933 -128227217 - L1ME2 LINE L1 -24 6140 5782 290 326 36 0 chr5 71403169 71403307 -128226843 - L1ME2 LINE L1 -310 5811 5669 332 48 63 0 chr5 71403518 71403581 -128226569 + (TA)n Simple_repeat Simple_repeat 2 68 0 232 333 66 57 chr5 71403727 71403939 -128226211 + L2 LINE L2 3029 3205 -67 1649 222 175 30 chr5 71404046 71404645 -128225505 - MER76 LTR ERV -2 686 1 1537 163 40 72 chr5 71405254 71405628 -128224522 - THE1B LTR MaLR -2 362 1 244 370 19 9 chr5 71405773 71405881 -128224269 + L2 LINE L2 3199 3307 -6 5026 124 26 5 chr5 71405999 71406800 -128223350 + L1MA3 LINE L1 5453 6270 -35 547 26 26 0 chr5 71406921 71406998 -128223152 + (TA)n Simple_repeat Simple_repeat 1 79 0 24 0 0 0 chr5 71407060 71407084 -128223066 + AT_rich Low_complexity Low_complexity 1 24 0 418 262 8 25 chr5 71407240 71407362 -128222788 - HERVK3 LTR ERVK -7069 174 55 267 109 254 0 chr5 71407426 71407481 -128222669 - HERVK3 LTR ERVK -7025 218 150 614 224 179 63 chr5 71408006 71408341 -128221809 - MLT1A2 LTR MaLR 0 374 1 205 227 0 30 chr5 71409832 71409898 -128220252 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 219 170 0 0 chr5 71411258 71411305 -128218845 + (TA)n Simple_repeat Simple_repeat 1 47 0 30 0 0 0 chr5 71412082 71412112 -128218038 + AT_rich Low_complexity Low_complexity 1 30 0 21 82 0 0 chr5 71413119 71413168 -128216982 + AT_rich Low_complexity Low_complexity 1 49 0 1327 215 10 10 chr5 71413297 71413585 -128216565 + AluJo SINE Alu 1 288 -24 423 299 96 46 chr5 71413909 71414233 -128215917 + L1MCa LINE L1 1093 1432 -4994 315 227 65 141 chr5 71414322 71414629 -128215521 + L1 LINE L1 4108 4437 -1709 1765 193 52 37 chr5 71414629 71414826 -128215324 - LTR57 LTR ERVL 0 411 218 2368 67 0 0 chr5 71414826 71414843 -128215307 - AluY SINE Alu -13 298 282 1374 25 0 0 chr5 71414843 71415005 -128215145 + (TTTCC)n Simple_repeat Simple_repeat 2 163 0 189 0 0 0 chr5 71415005 71415026 -128215124 + (TTTTC)n Simple_repeat Simple_repeat 3 23 0 2368 67 0 0 chr5 71415026 71415305 -128214845 - AluY SINE Alu -27 284 1 1765 193 52 37 chr5 71415305 71415512 -128214638 - LTR57 LTR ERVL -193 218 1 315 227 65 141 chr5 71415512 71415869 -128214281 + L1 LINE L1 4437 4721 -1425 373 114 45 11 chr5 71415874 71415962 -128214188 + (TA)n Simple_repeat Simple_repeat 2 92 0 932 286 69 20 chr5 71416000 71416392 -128213758 + L1ME1 LINE L1 5751 6161 -5 2230 95 0 19 chr5 71416708 71417024 -128213126 - AluSg SINE Alu 0 310 1 23 33 0 0 chr5 71417129 71417159 -128212991 + AT_rich Low_complexity Low_complexity 1 30 0 22 70 0 0 chr5 71417341 71417384 -128212766 + AT_rich Low_complexity Low_complexity 1 43 0 184 316 76 25 chr5 71418720 71418799 -128211351 + MER5B DNA MER1_type 52 134 -44 2272 76 0 0 chr5 71418894 71419196 -128210954 - L1PA5 LINE L1 0 6154 5853 2154 38 0 4 chr5 71419196 71419459 -128210691 + L1PA5 LINE L1 5600 5861 -293 22 0 0 0 chr5 71419465 71419487 -128210663 + AT_rich Low_complexity Low_complexity 1 22 0 205 171 0 0 chr5 71419708 71419743 -128210407 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 919 309 60 19 chr5 71419823 71420253 -128209897 + MLT1J LTR MaLR 4 451 -60 201 269 15 45 chr5 71420255 71420322 -128209828 + MER5B DNA MER1_type 3 67 -111 1993 138 7 0 chr5 71420822 71421119 -128209031 - AluSx SINE Alu -13 299 1 28 91 0 0 chr5 71421210 71421287 -128208863 + AT_rich Low_complexity Low_complexity 1 77 0 1124 248 133 41 chr5 71422686 71423204 -128206946 - MLT1F1 LTR MaLR -2 565 3 229 315 72 9 chr5 71423257 71423368 -128206782 + L2 LINE L2 854 971 -2343 330 236 166 57 chr5 71423420 71423577 -128206573 - MER5B DNA MER1_type 0 178 5 790 239 55 15 chr5 71423636 71423837 -128206313 + MER58A DNA MER1_type 4 212 -12 261 83 0 0 chr5 71423875 71423911 -128206239 + (TC)n Simple_repeat Simple_repeat 1 36 0 186 277 111 79 chr5 71424098 71424441 -128205709 + L2 LINE L2 1310 1663 -1651 234 348 35 17 chr5 71424573 71424688 -128205462 - HAL1 LINE L1 -2043 464 348 607 194 212 86 chr5 71424838 71425225 -128204925 - MER31B LTR ERV1 -3 511 1 1855 164 107 13 chr5 71425295 71425686 -128204464 - MSTA LTR MaLR 0 428 1 1964 146 32 40 chr5 71425718 71426096 -128204054 + THE1C LTR MaLR 1 375 0 232 184 0 0 chr5 71426178 71426227 -128203923 - L1MC4 LINE L1 -1340 6702 6654 547 252 93 39 chr5 71426422 71426680 -128203470 - MER20B DNA MER1_type -278 505 234 2227 115 3 0 chr5 71427401 71427705 -128202445 - AluSp SINE Alu -8 305 1 672 291 92 40 chr5 71427765 71428057 -128202093 + MER65A LTR ERV1 1 323 -122 2068 131 150 5 chr5 71428057 71428431 -128201719 + MSTA LTR MaLR 1 428 0 672 291 92 40 chr5 71428431 71428561 -128201589 + MER65A LTR ERV1 323 445 0 379 192 40 30 chr5 71428893 71428992 -128201158 + MER65A-int LTR ERV1 891 990 -4133 287 196 196 9 chr5 71428994 71429106 -128201044 + MER34C LTR ERV1 160 292 -293 586 254 53 66 chr5 71429146 71429419 -128200731 + MER65A-int LTR ERV1 1150 1425 -3511 192 77 0 0 chr5 71429419 71429445 -128200705 + (TG)n Simple_repeat Simple_repeat 2 27 0 586 254 53 66 chr5 71429445 71430135 -128200015 + MER65A-int LTR ERV1 1425 1993 -2943 * 800 221 74 116 chr5 71430111 71430706 -128199444 + MER65A-int LTR ERV1 2329 3183 -1697 1793 289 48 47 chr5 71430713 71431458 -128198692 + L1PA12 LINE L1 2 747 -6834 5625 107 33 9 chr5 71431460 71432330 -128197820 + L1PA15 LINE L1 5275 6165 0 1293 161 113 127 chr5 71432390 71432949 -128197201 + MER65A-int LTR ERV1 4026 4576 -1755 1651 6 0 0 chr5 71435302 71435483 -128194667 - AluYa5 SINE Alu 0 311 131 2650 100 0 0 chr5 71435685 71436054 -128194096 - L1PB1 LINE L1 -1 6150 5782 429 206 0 0 chr5 71436056 71436148 -128194002 + (CATATA)n Simple_repeat Simple_repeat 3 94 0 1279 82 39 0 chr5 71436149 71436331 -128193819 - L1PB1 LINE L1 -363 5788 5600 2051 201 45 29 chr5 71436839 71437396 -128192754 + MER65A-int LTR ERV1 3259 3824 -1112 * 3003 264 68 48 chr5 71437378 71439048 -128191102 + MER65A-int LTR ERV1 3355 4871 0 412 301 92 66 chr5 71439048 71439323 -128190827 + MER65A LTR ERV1 1 292 -153 6121 93 12 20 chr5 71439323 71440886 -128189264 - L1PA8A LINE L1 0 6131 4592 412 301 92 66 chr5 71440886 71441035 -128189115 + MER65A LTR ERV1 292 436 -9 247 353 32 19 chr5 71442132 71442288 -128187862 - L2 LINE L2 -726 2588 2431 240 212 0 0 chr5 71442542 71442608 -128187542 + A-rich Low_complexity Low_complexity 2 67 0 40 21 0 0 chr5 71442651 71442698 -128187452 + AT_rich Low_complexity Low_complexity 1 47 0 307 317 36 24 chr5 71444517 71444684 -128185466 + L1MEc LINE L1 1519 1687 -4709 204 354 0 0 chr5 71445031 71445192 -128184958 + A-rich Low_complexity Low_complexity 1 161 0 232 246 132 53 chr5 71445704 71445818 -128184332 - L2 LINE L2 -33 3280 3158 945 149 8 115 chr5 71446451 71446686 -128183464 + MER2 DNA MER2_type 1 210 -135 206 300 0 0 chr5 71447620 71447670 -128182480 + MER5A DNA MER1_type 53 102 -87 22 0 0 0 chr5 71448548 71448570 -128181580 + AT_rich Low_complexity Low_complexity 1 22 0 38 39 0 0 chr5 71448649 71448701 -128181449 + AT_rich Low_complexity Low_complexity 1 52 0 29 78 0 0 chr5 71448805 71448869 -128181281 + AT_rich Low_complexity Low_complexity 1 64 0 31 68 0 0 chr5 71449532 71449591 -128180559 + AT_rich Low_complexity Low_complexity 1 59 0 405 222 62 25 chr5 71449668 71449830 -128180320 + L1M4 LINE L1 3816 3983 -2163 525 251 101 22 chr5 71450064 71450147 -128180003 - LTR37B LTR ERV1 -3 465 390 1238 234 37 68 chr5 71450147 71450629 -128179521 + MLT1C LTR MaLR 1 467 0 525 251 101 22 chr5 71450629 71450772 -128179378 - LTR37B LTR ERV1 -78 390 221 306 289 19 0 chr5 71450776 71450880 -128179270 - L1MA10 LINE L1 -4 6330 6225 * 594 256 56 34 chr5 71450873 71451139 -128179011 - L1ME2 LINE L1 -125 6039 5768 545 216 173 22 chr5 71451152 71451337 -128178813 + MER20 DNA MER1_type 1 213 -6 809 238 176 27 chr5 71451342 71451716 -128178434 - L1ME2 LINE L1 -406 5758 5329 26 82 0 0 chr5 71451771 71451832 -128178318 + AT_rich Low_complexity Low_complexity 1 61 0 1354 269 92 43 chr5 71452012 71452470 -128177680 - L1ME2 LINE L1 -1150 4996 4562 2470 141 24 12 chr5 71452470 71452889 -128177261 - MSTA LTR MaLR 0 428 5 1354 269 92 43 chr5 71452889 71453519 -128176631 - L1ME2 LINE L1 -1584 4562 3855 23 0 0 0 chr5 71453751 71453774 -128176376 + AT_rich Low_complexity Low_complexity 1 23 0 1993 139 7 3 chr5 71454320 71454629 -128175521 - AluSx SINE Alu -2 310 1 189 0 0 0 chr5 71454925 71454946 -128175204 + (TG)n Simple_repeat Simple_repeat 2 22 0 237 215 15 15 chr5 71454966 71455031 -128175119 + (TA)n Simple_repeat Simple_repeat 1 65 0 333 68 0 0 chr5 71455038 71455082 -128175068 + (TG)n Simple_repeat Simple_repeat 1 44 0 408 319 108 32 chr5 71455688 71455967 -128174183 - L1MC/D LINE L1 -2213 5595 5296 239 298 76 66 chr5 71456142 71456718 -128173432 - L1ME LINE L1 -252 5918 5340 332 333 60 47 chr5 71456960 71457335 -128172815 - L1ME LINE L1 -1424 4722 4348 24 96 0 0 chr5 71458550 71458623 -128171527 + AT_rich Low_complexity Low_complexity 1 73 0 21 0 0 0 chr5 71459041 71459062 -128171088 + AT_rich Low_complexity Low_complexity 1 21 0 281 238 12 0 chr5 71459788 71459868 -128170282 + (TA)n Simple_repeat Simple_repeat 1 81 0 301 56 0 37 chr5 71460820 71460874 -128169276 + (CA)n Simple_repeat Simple_repeat 2 53 0 266 224 19 112 chr5 71461072 71461179 -128168971 + MER110A LTR ERV1 74 170 -298 431 335 60 4 chr5 71461252 71461518 -128168632 + MER110 LTR ERV1 185 465 -26 1988 196 97 44 chr5 71461885 71463009 -128167141 + pTR5 LTR ERV1 743 2179 -259 12102 239 28 21 chr5 71463407 71464138 -128166012 - L1PA16 LINE L1 -104 7500 6776 1781 79 19 92 chr5 71464138 71464453 -128165697 - L1PA10 LINE L1 -1 6167 5876 12102 239 28 21 chr5 71464453 71465280 -128164870 - L1PA16 LINE L1 -828 6776 5956 1017 75 0 19 chr5 71465280 71465440 -128164710 + (TTCC)n Simple_repeat Simple_repeat 3 159 0 1047 172 153 65 chr5 71465440 71465702 -128164448 - AluJo SINE Alu -16 286 2 12102 239 28 21 chr5 71465702 71469433 -128160717 - L1PA16 LINE L1 -1647 5957 2182 404 362 68 10 chr5 71469557 71469764 -128160386 - L1PA16 LINE L1 -6564 1010 792 22 56 0 0 chr5 71469897 71469933 -128160217 + AT_rich Low_complexity Low_complexity 1 36 0 1968 125 10 16 chr5 71470457 71470770 -128159380 + AluSq SINE Alu 1 311 -2 1033 110 7 0 chr5 71470911 71471056 -128159094 - AluSg/x SINE Alu -16 296 151 246 335 126 33 chr5 71471297 71471479 -128158671 + MLT1J1 LTR MaLR 248 446 0 255 61 0 0 chr5 71471746 71471779 -128158371 + (A)n Simple_repeat Simple_repeat 1 33 0 735 278 28 9 chr5 71471817 71472029 -128158121 - MER20 DNA MER1_type -2 217 2 295 328 9 17 chr5 71473224 71473340 -128156810 - MIR SINE MIR -24 238 124 1434 265 51 13 chr5 71473608 71474061 -128156089 + MLT1D LTR MaLR 36 505 0 1669 174 130 18 chr5 71474505 71474889 -128155261 - MSTA LTR MaLR -1 427 1 8847 159 8 34 chr5 71474889 71476509 -128153641 - MSTA-int LTR MaLR 0 1580 3 1788 144 158 13 chr5 71476511 71476885 -128153265 - MSTA LTR MaLR 0 428 1 297 128 0 0 chr5 71477657 71477704 -128152446 + (TG)n Simple_repeat Simple_repeat 2 48 0 1195 190 154 3 chr5 71477775 71477846 -128152304 - MER47A DNA MER2_type -1972 351 292 12424 61 8 0 chr5 71477846 71480234 -128149916 + L1PA6 LINE L1 3742 6150 -4 1195 190 154 3 chr5 71480234 71480467 -128149683 - MER47A DNA MER2_type -2031 292 1 465 329 43 10 chr5 71480987 71481194 -128148956 - MER110 LTR ERV1 -36 455 242 662 199 112 23 chr5 71481399 71481619 -128148531 + MER33 DNA MER1_type 1 226 -98 975 270 9 0 chr5 71481757 71481986 -128148164 - MLT1D LTR MaLR 0 505 275 960 180 11 26 chr5 71481986 71482175 -128147975 - MLT1A2 LTR MaLR 0 374 189 363 309 0 0 chr5 71482249 71482359 -128147791 - MLT1A2 LTR MaLR -214 160 51 289 170 0 0 chr5 71482406 71482453 -128147697 - MLT1A2 LTR MaLR -327 47 1 761 236 56 14 chr5 71482494 71482710 -128147440 - MLT1D LTR MaLR -280 225 1 1388 248 96 118 chr5 71482917 71484422 -128145728 - MER110-int LTR ERV1 -1057 3590 1952 3829 187 37 5 chr5 71484520 71485273 -128144877 + Tigger2 DNA MER2_type 2 778 -1940 1037 153 98 86 chr5 71485304 71485559 -128144591 + Tigger2 DNA MER2_type 2451 2708 -10 199 370 102 14 chr5 71486342 71486558 -128143592 - L2 LINE L2 -1051 2263 2029 183 343 14 0 chr5 71486981 71487054 -128143096 - MIR SINE MIR -136 126 53 11108 36 0 0 chr5 71487093 71488407 -128141743 - L1PA3 LINE L1 -743 5403 4090 6594 36 0 1 chr5 71488407 71489136 -128141014 + L1PA3 LINE L1 5414 6152 -3 29 0 0 0 chr5 71489288 71489317 -128140833 + AT_rich Low_complexity Low_complexity 1 29 0 23 78 0 0 chr5 71489644 71489695 -128140455 + AT_rich Low_complexity Low_complexity 1 51 0 529 342 26 0 chr5 71491070 71491304 -128138846 + LTR16A LTR ERVL 27 266 -184 347 73 18 0 chr5 71491608 71491663 -128138487 + (TG)n Simple_repeat Simple_repeat 1 56 0 290 254 0 162 chr5 71492175 71492348 -128137802 + L2 LINE L2 3165 3309 -4 272 291 169 38 chr5 71494423 71494684 -128135466 + MLT1J LTR MaLR 7 301 -210 334 119 0 60 chr5 71494848 71494915 -128135235 - MADE1 DNA Mariner -17 63 1 1320 210 53 11 chr5 71496227 71496508 -128133642 + AluJo SINE Alu 1 293 -19 28 48 0 0 chr5 71497653 71497695 -128132455 + AT_rich Low_complexity Low_complexity 1 42 0 1946 127 7 0 chr5 71498050 71498326 -128131824 + AluSq SINE Alu 3 280 -33 234 0 0 0 chr5 71498326 71498352 -128131798 + (CA)n Simple_repeat Simple_repeat 1 26 0 337 244 0 35 chr5 71498353 71498439 -128131711 + L1MC4 LINE L1 6613 6695 -1347 314 297 0 11 chr5 71498362 71498453 -128131697 - L1MC4 LINE L1 -1339 6703 6614 * 198 0 0 0 chr5 71498465 71498487 -128131663 + (TA)n Simple_repeat Simple_repeat 1 22 0 420 243 65 19 chr5 71498834 71498941 -128131209 - Tigger3(Golem) DNA MER2_type -1 3028 2917 * 450 258 0 0 chr5 71498932 71499029 -128131121 - Tigger3(Golem) DNA MER2_type -2931 98 2 7127 24 0 0 chr5 71499199 71500360 -128129790 - L1PA3 LINE L1 -434 5721 4561 3836 28 9 2 chr5 71500360 71500790 -128129360 + L1PA3 LINE L1 5721 6155 0 24 0 0 0 chr5 71501359 71501383 -128128767 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr5 71502060 71502088 -128128062 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr5 71502649 71502682 -128127468 + AT_rich Low_complexity Low_complexity 1 33 0 672 168 40 0 chr5 71502748 71502873 -128127277 - L1PA13 LINE L1 -1 6162 6033 411 235 42 17 chr5 71503063 71503182 -128126968 - MER20 DNA MER1_type -7 212 91 600 211 34 46 chr5 71504439 71504614 -128125536 - MER104 DNA Tc2 -1 179 7 3315 231 61 22 chr5 71504678 71505180 -128124970 - L1MC3 LINE L1 -666 7119 6638 2034 172 123 5 chr5 71505180 71505563 -128124587 - MSTA LTR MaLR 0 428 1 3315 231 61 22 chr5 71505563 71505997 -128124153 - L1MC3 LINE L1 -1147 6638 6147 2704 191 47 2 chr5 71506149 71506677 -128123473 - L1PB4 LINE L1 -1 6857 6306 1932 219 14 68 chr5 71506677 71507193 -128122957 - L1PB4 LINE L1 -3456 3392 2949 2211 128 0 0 chr5 71507193 71507499 -128122651 - AluSg SINE Alu -4 306 1 1932 219 14 68 chr5 71507499 71507900 -128122250 - L1PB4 LINE L1 -3899 2949 2528 300 273 0 0 chr5 71507978 71508066 -128122084 - MIR SINE MIR -75 187 100 30 0 0 0 chr5 71508421 71508451 -128121699 + AT_rich Low_complexity Low_complexity 1 30 0 256 302 94 9 chr5 71509730 71509836 -128120314 - L2 LINE L2 0 3272 3158 21 0 0 0 chr5 71510231 71510252 -128119898 + AT_rich Low_complexity Low_complexity 1 21 0 369 378 34 21 chr5 71510655 71510946 -128119204 - L2 LINE L2 -1042 2272 1978 528 300 13 0 chr5 71512172 71512322 -128117828 + MLT1F LTR MaLR 16 167 -400 1420 172 49 58 chr5 71512530 71512622 -128117528 + MLT1A1 LTR MaLR 43 134 -231 2039 120 0 28 chr5 71512622 71512954 -128117196 - AluSg SINE Alu 0 324 1 1420 172 49 58 chr5 71512954 71513186 -128116964 + MLT1A1 LTR MaLR 134 365 0 661 208 106 51 chr5 71513186 71513386 -128116764 + MLT1F LTR MaLR 333 626 0 1021 191 77 0 chr5 71513884 71513949 -128116201 - MER3 DNA MER1_type 0 209 150 2443 66 0 7 chr5 71513949 71514254 -128115896 + AluY SINE Alu 1 303 -8 1021 191 77 0 chr5 71514254 71514382 -128115768 - MER3 DNA MER1_type -59 150 1 1745 210 13 56 chr5 71514402 71514470 -128115680 - MLT1A2 LTR MaLR 0 374 305 1978 152 30 0 chr5 71514470 71514772 -128115378 + AluSx SINE Alu 1 311 -1 1745 210 13 56 chr5 71514772 71515049 -128115101 - MLT1A2 LTR MaLR -69 305 45 2428 66 3 13 chr5 71515049 71515354 -128114796 - AluY SINE Alu -9 302 1 1745 210 13 56 chr5 71515354 71515398 -128114752 - MLT1A2 LTR MaLR -329 45 1 23 33 0 0 chr5 71515629 71515659 -128114491 + AT_rich Low_complexity Low_complexity 1 30 0 1303 131 91 0 chr5 71515675 71515896 -128114254 - L1MA6 LINE L1 -4 6296 6056 1727 157 80 0 chr5 71515896 71516196 -128113954 - MER2 DNA MER2_type -21 324 1 296 240 115 19 chr5 71516202 71516306 -128113844 - L2 LINE L2 -96 3217 3104 21 0 0 0 chr5 71516742 71516763 -128113387 + AT_rich Low_complexity Low_complexity 1 21 0 656 147 0 0 chr5 71521638 71521740 -128108410 + AluSp/q SINE Alu 210 311 -2 749 192 15 0 chr5 71521742 71521872 -128108278 + FLAM_C SINE Alu 1 132 -1 1259 128 49 5 chr5 71521881 71522084 -128108066 - THE1B LTR MaLR -150 214 3 9810 101 60 47 chr5 71522091 71523644 -128106506 - THE1B-int LTR MaLR -6 1574 2 2453 123 25 6 chr5 71523645 71524002 -128106148 - THE1B LTR MaLR 0 364 1 399 261 50 8 chr5 71524101 71524220 -128105930 - MLT1G1 LTR MaLR -456 139 16 955 157 16 54 chr5 71524281 71524466 -128105684 + FAM SINE Alu 1 49 0 226 321 30 30 chr5 71524800 71524934 -128105216 - MLT1H LTR MaLR -387 162 29 2128 212 135 61 chr5 71525124 71525582 -128104568 - MER82 DNA MER2_type 0 653 138 2066 110 0 58 chr5 71525582 71525890 -128104260 - AluSx SINE Alu -22 290 1 2128 212 135 61 chr5 71525890 71526039 -128104111 - MER82 DNA MER2_type -515 138 1 2233 101 0 7 chr5 71526220 71526518 -128103632 - AluSx SINE Alu -15 297 2 1569 109 23 0 chr5 71526519 71526838 -128103312 - L1P4 LINE L1 -676 5485 5161 1797 131 8 8 chr5 71527359 71527627 -128102523 + AluSx SINE Alu 39 306 -6 2295 104 0 0 chr5 71527661 71527958 -128102192 + AluSg SINE Alu 1 297 -13 303 93 0 0 chr5 71528403 71528446 -128101704 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1510 157 39 57 chr5 71528453 71528604 -128101546 - AluJo SINE Alu -37 275 130 1964 138 10 0 chr5 71528604 71528894 -128101256 + AluSx SINE Alu 1 293 -19 1510 157 39 57 chr5 71528894 71529022 -128101128 - AluJo SINE Alu -182 130 1 1874 125 7 24 chr5 71529847 71530158 -128099992 + AluSx SINE Alu 1 306 0 240 257 191 19 chr5 71530208 71530313 -128099837 + L2 LINE L2 2938 3060 -212 1536 167 43 46 chr5 71530383 71530564 -128099586 - AluJo SINE Alu -7 305 124 1825 119 17 34 chr5 71530564 71530859 -128099291 - AluSg SINE Alu -20 290 1 1536 167 43 46 chr5 71530859 71530982 -128099168 - AluJo SINE Alu -188 124 2 2057 142 3 0 chr5 71531380 71531735 -128098415 - AluSx SINE Alu 0 356 1 910 102 0 0 chr5 71532055 71532173 -128097977 - FLAM_C SINE Alu -15 118 1 269 211 0 0 chr5 71532331 71532388 -128097762 - MIR3 SINE MIR -5 203 147 224 324 88 29 chr5 71532380 71532482 -128097668 - MER5B DNA MER1_type -8 170 63 * 1843 165 10 13 chr5 71532482 71532791 -128097359 - AluJo SINE Alu -4 308 1 1231 129 0 0 chr5 71532801 71532972 -128097178 - AluSg/x SINE Alu -3 309 139 492 177 83 21 chr5 71532972 71533068 -128097082 + AluSg/x SINE Alu 195 296 -14 257 163 0 20 chr5 71533408 71533457 -128096693 - FLAM SINE Alu 0 133 86 1131 143 5 35 chr5 71533457 71533660 -128096490 - AluJo SINE Alu -92 220 24 1017 191 77 0 chr5 71534319 71534384 -128095766 - MER3 DNA MER1_type 0 209 150 2404 69 0 7 chr5 71534384 71534688 -128095462 + AluY SINE Alu 1 302 -9 1017 191 77 0 chr5 71534688 71534816 -128095334 - MER3 DNA MER1_type -59 150 1 1745 210 13 56 chr5 71534836 71534904 -128095246 - MLT1A2 LTR MaLR 0 374 305 1988 152 30 0 chr5 71534904 71535207 -128094943 + AluSx SINE Alu 1 312 0 1745 210 13 56 chr5 71535207 71535484 -128094666 - MLT1A2 LTR MaLR -69 305 45 2428 66 3 13 chr5 71535484 71535789 -128094361 - AluY SINE Alu -9 302 1 1745 210 13 56 chr5 71535789 71535833 -128094317 - MLT1A2 LTR MaLR -329 45 1 23 33 0 0 chr5 71536064 71536094 -128094056 + AT_rich Low_complexity Low_complexity 1 30 0 1331 127 91 0 chr5 71536110 71536331 -128093819 - L1MA6 LINE L1 -4 6296 6056 1727 157 80 0 chr5 71536331 71536631 -128093519 - MER2 DNA MER2_type -21 324 1 296 240 115 19 chr5 71536637 71536741 -128093409 - L2 LINE L2 -96 3217 3104 21 0 0 0 chr5 71537177 71537198 -128092952 + AT_rich Low_complexity Low_complexity 1 21 0 656 147 0 0 chr5 71542067 71542169 -128087981 + AluSp/q SINE Alu 210 311 -2 749 192 15 0 chr5 71542171 71542301 -128087849 + FLAM_C SINE Alu 1 132 -1 1259 128 49 5 chr5 71542310 71542513 -128087637 - THE1B LTR MaLR -150 214 3 9810 101 60 47 chr5 71542520 71544073 -128086077 - THE1B-int LTR MaLR -6 1574 2 2453 123 25 6 chr5 71544074 71544431 -128085719 - THE1B LTR MaLR 0 364 1 459 244 50 8 chr5 71544530 71544649 -128085501 - MLT1G1 LTR MaLR -456 139 16 955 157 16 54 chr5 71544710 71544895 -128085255 + FAM SINE Alu 1 49 0 226 321 30 30 chr5 71545229 71545363 -128084787 - MLT1H LTR MaLR -387 162 29 2128 212 135 61 chr5 71545553 71546011 -128084139 - MER82 DNA MER2_type 0 653 138 2060 110 0 62 chr5 71546011 71546320 -128083830 - AluSx SINE Alu -22 290 1 2128 212 135 61 chr5 71546320 71546469 -128083681 - MER82 DNA MER2_type -515 138 1 2233 101 0 7 chr5 71546651 71546949 -128083201 - AluSx SINE Alu -15 297 2 1569 109 23 0 chr5 71546950 71547269 -128082881 - L1P4 LINE L1 -676 5485 5161 1909 126 7 0 chr5 71547790 71548061 -128082089 + AluSx SINE Alu 39 311 -1 2272 108 0 0 chr5 71548103 71548400 -128081750 + AluSg SINE Alu 1 297 -13 303 93 0 0 chr5 71548845 71548888 -128081262 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1524 154 39 57 chr5 71548895 71549046 -128081104 - AluJo SINE Alu -37 275 130 1968 135 10 0 chr5 71549046 71549335 -128080815 + AluSx SINE Alu 1 292 -20 1524 154 39 57 chr5 71549335 71549463 -128080687 - AluJo SINE Alu -182 130 1 1874 125 7 24 chr5 71550288 71550599 -128079551 + AluSx SINE Alu 1 306 0 240 257 191 19 chr5 71550649 71550754 -128079396 + L2 LINE L2 2938 3060 -212 1536 167 43 46 chr5 71550824 71551005 -128079145 - AluJo SINE Alu -7 305 124 1825 119 17 34 chr5 71551005 71551300 -128078850 - AluSg SINE Alu -20 290 1 1536 167 43 46 chr5 71551300 71551423 -128078727 - AluJo SINE Alu -188 124 2 2057 142 3 0 chr5 71551821 71552176 -128077974 - AluSx SINE Alu 0 356 1 910 102 0 0 chr5 71552496 71552614 -128077536 - FLAM_C SINE Alu -15 118 1 269 211 0 0 chr5 71552772 71552829 -128077321 - MIR3 SINE MIR -5 203 147 224 284 98 39 chr5 71552821 71552923 -128077227 - MER5A DNA MER1_type -8 181 74 * 1843 165 10 13 chr5 71552923 71553232 -128076918 - AluJo SINE Alu -4 308 1 1231 129 0 0 chr5 71553242 71553413 -128076737 - AluSg/x SINE Alu -3 309 139 492 177 83 21 chr5 71553413 71553509 -128076641 + AluSg/x SINE Alu 197 298 -14 257 163 0 20 chr5 71553849 71553898 -128076252 - FLAM SINE Alu 0 133 86 1131 143 5 35 chr5 71553898 71554101 -128076049 - AluJo SINE Alu -92 220 24 1658 179 3 3 chr5 71554641 71554938 -128075212 - AluJo SINE Alu -15 297 1 833 146 0 8 chr5 71555176 71555306 -128074844 - FLAM_C SINE Alu -8 135 7 1534 158 93 0 chr5 71555311 71555590 -128074560 - AluJo SINE Alu -7 305 1 192 353 31 84 chr5 71555596 71555857 -128074293 + L2 LINE L2 2993 3239 -33 2041 147 3 0 chr5 71555905 71556205 -128073945 - AluSx SINE Alu -11 301 1 1817 153 7 42 chr5 71556532 71556839 -128073311 - AluSx SINE Alu -16 296 1 1557 188 14 24 chr5 71556902 71557037 -128073113 + AluJb SINE Alu 2 137 -175 2302 99 0 7 chr5 71557037 71557339 -128072811 + AluSg SINE Alu 1 300 -10 1557 188 14 24 chr5 71557339 71557496 -128072654 + AluJb SINE Alu 137 291 -21 549 179 94 8 chr5 71557498 71557615 -128072535 + MER3 DNA MER1_type 22 148 -61 1740 175 21 0 chr5 71557623 71557908 -128072242 - AluJb SINE Alu -21 291 1 1355 177 141 0 chr5 71557949 71558197 -128071953 - AluJb SINE Alu -29 283 1 2736 29 3 0 chr5 71558390 71558699 -128071451 - L1PA3 LINE L1 0 6155 5846 1850 157 3 3 chr5 71559468 71559762 -128070388 + AluJo SINE Alu 1 294 -18 2457 62 13 7 chr5 71559764 71560071 -128070079 + AluY SINE Alu 1 309 -2 453 74 0 0 chr5 71560475 71560529 -128069621 + Alu SINE Alu 7 60 -258 1813 123 0 4 chr5 71560540 71560808 -128069342 + AluSg SINE Alu 1 267 -43 323 275 64 0 chr5 71561110 71561219 -128068931 - MLT1I LTR MaLR 0 409 294 1204 205 43 4 chr5 71561478 71561732 -128068418 - MLT2D LTR ERVL -105 309 46 21 36 0 0 chr5 71562189 71562217 -128067933 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 71564409 71564439 -128065711 + AT_rich Low_complexity Low_complexity 1 30 0 910 339 54 19 chr5 71565977 71566686 -128063464 + L2 LINE L2 2507 3309 -4 301 339 54 24 chr5 71566765 71566933 -128063217 + MIR SINE MIR 50 222 -40 180 0 0 0 chr5 71567290 71567310 -128062840 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 1697 166 219 17 chr5 71567442 71567798 -128062352 - MSTA LTR MaLR 0 428 1 247 314 50 33 chr5 71567891 71568012 -128062138 + L2 LINE L2 2931 3053 -219 1881 139 26 13 chr5 71568480 71568783 -128061367 - AluSx SINE Alu -5 307 1 2312 130 3 48 chr5 71568860 71569238 -128060912 + L1PA13 LINE L1 5799 6159 -4 1826 121 104 4 chr5 71569238 71569518 -128060632 + AluSq SINE Alu 1 308 -5 2222 87 3 3 chr5 71569975 71570263 -128059887 + AluSq SINE Alu 5 292 -21 370 350 69 14 chr5 71570277 71570494 -128059656 - L1ME3 LINE L1 -272 5890 5662 229 139 0 0 chr5 71570498 71570541 -128059609 + LTR66 LTR ERVL 398 440 -170 229 214 0 36 chr5 71571106 71571162 -128058988 - L1P4 LINE L1 -602 5572 5519 405 320 190 38 chr5 71571188 71571745 -128058405 + L2 LINE L2 2236 2877 -437 4585 213 41 10 chr5 71572634 71572828 -128057322 + L1PB4 LINE L1 4188 4375 -1779 243 0 0 0 chr5 71572828 71572855 -128057295 + (CA)n Simple_repeat Simple_repeat 2 28 0 4585 213 41 10 chr5 71572855 71573867 -128056283 + L1PB4 LINE L1 4375 5429 -725 2693 101 11 19 chr5 71573877 71574255 -128055895 - THE1C LTR MaLR 0 375 1 22 94 0 0 chr5 71574600 71574664 -128055486 + AT_rich Low_complexity Low_complexity 1 64 0 2412 206 18 46 chr5 71574666 71575513 -128054637 - L1PB4 LINE L1 -613 5543 4731 1253 164 32 86 chr5 71575494 71575842 -128054308 + L1PB4 LINE L1 5527 5855 -301 * 819 233 11 0 chr5 71575857 71576033 -128054117 - MSTD LTR MaLR 0 396 219 24 32 0 0 chr5 71576197 71576228 -128053922 + AT_rich Low_complexity Low_complexity 1 31 0 851 202 26 16 chr5 71577661 71577854 -128052296 - L1MA7 LINE L1 -166 6125 5931 680 176 53 35 chr5 71577851 71578021 -128052129 + L1MA7 LINE L1 6119 6291 0 * 1465 230 39 17 chr5 71578244 71578601 -128051549 - MLT1A1 LTR MaLR 0 365 1 1998 203 22 20 chr5 71578601 71579010 -128051140 - MLT1A1-int LTR MaLR 0 1735 1326 2301 230 72 30 chr5 71579354 71580113 -128050037 - MLT1A1-int LTR MaLR -488 883 1 1232 220 31 59 chr5 71580124 71580479 -128049671 - MLT1A1 LTR MaLR -11 354 10 681 156 136 13 chr5 71581839 71581993 -128048157 - Tigger7 DNA MER2_type -2 2485 2313 558 126 81 36 chr5 71582255 71582366 -128047784 - Tigger7 DNA MER2_type -163 2324 2209 580 234 110 7 chr5 71582385 71582530 -128047620 - Tigger7 DNA MER2_type -545 160 1 24 0 0 0 chr5 71583542 71583566 -128046584 + AT_rich Low_complexity Low_complexity 1 24 0 32 0 0 0 chr5 71583628 71583660 -128046490 + AT_rich Low_complexity Low_complexity 1 32 0 5184 122 26 5 chr5 71583775 71584576 -128045574 - L1MA3 LINE L1 -35 6270 5453 222 370 19 9 chr5 71584694 71584802 -128045348 - L2 LINE L2 -6 3307 3199 1691 163 40 72 chr5 71584947 71585321 -128044829 + THE1B LTR MaLR 1 362 -2 1649 222 175 30 chr5 71585930 71586529 -128043621 + MER76 LTR ERV 1 686 -2 188 382 22 22 chr5 71586799 71586935 -128043215 - L2 LINE L2 -196 3076 2941 422 41 55 0 chr5 71586994 71587067 -128043083 + (TA)n Simple_repeat Simple_repeat 2 78 0 290 326 36 0 chr5 71587278 71587416 -128042734 + L1ME LINE L1 5669 5811 -310 2016 133 0 17 chr5 71588252 71588553 -128041597 + AluSx SINE Alu 1 296 -16 234 136 0 0 chr5 71589126 71589170 -128040980 + (TC)n Simple_repeat Simple_repeat 1 44 0 1083 220 43 24 chr5 71590242 71590682 -128039468 + MLT1D LTR MaLR 1 505 0 333 0 0 0 chr5 71590686 71590723 -128039427 + (CA)n Simple_repeat Simple_repeat 2 38 0 192 263 0 0 chr5 71590914 71590990 -128039160 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 2009 125 52 30 chr5 71591212 71591579 -128038571 + THE1C LTR MaLR 1 375 0 442 252 17 8 chr5 71592096 71592215 -128037935 - MER45A DNA AcHobo 0 178 59 242 265 48 12 chr5 71592372 71592455 -128037695 - MIR3 SINE MIR -9 199 114 23 0 0 0 chr5 71592844 71592867 -128037283 + AT_rich Low_complexity Low_complexity 1 23 0 2572 258 80 33 chr5 71593333 71593458 -128036692 + L1MDa LINE L1 1027 1145 -5395 2247 119 6 3 chr5 71593458 71593769 -128036381 + AluSx SINE Alu 1 312 0 2572 258 80 33 chr5 71593769 71594917 -128035233 + L1MDa LINE L1 1145 2360 -4180 1213 189 31 22 chr5 71594934 71595161 -128034989 + Tigger3b DNA MER2_type 1 229 -1002 1840 164 30 30 chr5 71595161 71595534 -128034616 + THE1C LTR MaLR 1 373 -2 8703 142 74 19 chr5 71595536 71597033 -128033117 + THE1C-int LTR MaLR 1 1580 0 2090 166 11 21 chr5 71597033 71597412 -128032738 + THE1C LTR MaLR 1 375 0 4603 168 46 20 chr5 71597412 71597529 -128032621 + Tigger3b DNA MER2_type 225 338 -2690 2109 59 0 0 chr5 71597529 71597784 -128032366 + AluY SINE Alu 47 301 -10 4603 168 46 20 chr5 71597784 71598642 -128031508 + Tigger3b DNA MER2_type 338 1225 -6 602 195 110 0 chr5 71598653 71598853 -128031297 + L1MDa LINE L1 2385 2606 -3934 23 0 0 0 chr5 71598910 71598933 -128031217 + AT_rich Low_complexity Low_complexity 1 23 0 2212 96 0 7 chr5 71599050 71599397 -128030753 - AluY SINE Alu 0 311 1 261 0 0 0 chr5 71599555 71599584 -128030566 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1480 132 93 89 chr5 71599586 71599866 -128030284 - AluSx SINE Alu -31 281 1 204 316 120 15 chr5 71600307 71600440 -128029710 + MIR SINE MIR 13 159 -103 2646 207 68 57 chr5 71601049 71601809 -128028341 + MER4E LTR ERV1 1 769 -10 193 373 85 34 chr5 71603397 71603574 -128026576 - MIR SINE MIR -17 245 60 29 70 0 0 chr5 71603597 71603654 -128026496 + AT_rich Low_complexity Low_complexity 1 57 0 470 311 167 49 chr5 71604118 71604632 -128025518 + L1MEd LINE L1 523 1097 -5022 28 0 0 0 chr5 71605037 71605065 -128025085 + AT_rich Low_complexity Low_complexity 1 28 0 6306 175 11 14 chr5 71605238 71606254 -128023896 - L1PA14 LINE L1 0 6161 5143 2113 122 35 27 chr5 71606254 71606623 -128023527 + THE1C LTR MaLR 1 372 -3 6306 175 11 14 chr5 71606623 71607681 -128022469 - L1PA14 LINE L1 -1018 5143 4088 2871 195 20 16 chr5 71607681 71607952 -128022198 + L1P LINE L1 2121 2390 -3756 2248 90 0 39 chr5 71607952 71608264 -128021886 + AluSc SINE Alu 1 300 -9 2871 195 20 16 chr5 71608264 71608602 -128021548 + L1P LINE L1 2390 2732 -3414 243 88 0 0 chr5 71609018 71609052 -128021098 + (CA)n Simple_repeat Simple_repeat 2 35 0 312 288 42 0 chr5 71609109 71609227 -128020923 - L1ME2 LINE L1 -16 6148 6026 885 238 50 25 chr5 71609233 71609595 -128020555 - L1MEc LINE L1 -3373 3271 2901 302 270 62 58 chr5 71609624 71609787 -128020363 - L1MEc LINE L1 -3959 2866 2700 1427 209 33 50 chr5 71609787 71610184 -128019966 + MLT1B LTR MaLR 1 390 0 302 270 62 58 chr5 71610184 71610279 -128019871 - L1MEc LINE L1 -4125 2700 2607 280 340 53 19 chr5 71610419 71610737 -128019413 - L1MEc LINE L1 -4905 1637 1309 310 298 18 18 chr5 71610807 71610921 -128019229 - L1MEc LINE L1 -5477 1348 1235 206 93 0 23 chr5 71611408 71611451 -128018699 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 689 225 0 12 chr5 71611453 71611613 -128018537 - L1PA16 LINE L1 -10 6156 5999 436 141 26 0 chr5 71611618 71611696 -128018454 + L1P LINE L1 5141 5220 -926 29 0 0 0 chr5 71612876 71612905 -128017245 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 71613909 71613930 -128016220 + AT_rich Low_complexity Low_complexity 1 21 0 234 191 0 0 chr5 71614455 71614502 -128015648 + T-rich Low_complexity Low_complexity 1 47 0 856 224 128 0 chr5 71614609 71614805 -128015345 - MER58A DNA MER1_type -3 221 1 355 259 56 19 chr5 71614812 71614920 -128015230 + L2 LINE L2 3188 3299 -14 336 303 97 32 chr5 71616549 71616734 -128013416 - MIR SINE MIR -13 249 53 439 314 77 72 chr5 71616839 71617073 -128013077 + MLT1F-int LTR MaLR 961 1199 -172 2788 100 2 10 chr5 71617073 71617482 -128012668 + L1PA10 LINE L1 5763 6168 0 439 314 77 72 chr5 71617482 71617648 -128012502 + MLT1F-int LTR MaLR 1199 1363 -8 538 246 165 54 chr5 71617657 71618096 -128012054 + MLT1F LTR MaLR 2 567 0 1428 269 37 11 chr5 71618098 71618563 -128011587 + L1MC4 LINE L1 7355 7831 -211 2151 145 0 0 chr5 71618884 71619195 -128010955 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr5 71621203 71621224 -128008926 + AT_rich Low_complexity Low_complexity 1 21 0 1297 186 28 68 chr5 71621226 71621548 -128008602 + AluJo SINE Alu 1 309 -3 23 0 0 0 chr5 71622639 71622662 -128007488 + AT_rich Low_complexity Low_complexity 1 23 0 204 200 0 0 chr5 71623709 71623754 -128006396 + GA-rich Low_complexity Low_complexity 2 46 0 231 213 52 26 chr5 71624783 71624938 -128005212 + (TA)n Simple_repeat Simple_repeat 2 160 0 25 0 0 0 chr5 71625200 71625225 -128004925 + AT_rich Low_complexity Low_complexity 1 25 0 2040 132 0 3 chr5 71626491 71626787 -128003363 - AluSq SINE Alu -18 295 1 2348 96 0 0 chr5 71626916 71627219 -128002931 - AluSg SINE Alu -7 303 1 1446 147 0 4 chr5 71627290 71627521 -128002629 - AluJb SINE Alu -12 300 71 26 0 0 0 chr5 71627910 71627936 -128002214 + AT_rich Low_complexity Low_complexity 1 26 0 324 227 0 13 chr5 71628421 71628496 -128001654 - MLT1K LTR MaLR -28 560 487 399 41 0 0 chr5 71628759 71628808 -128001342 + (TG)n Simple_repeat Simple_repeat 2 50 0 1839 101 34 98 chr5 71628974 71629081 -128001069 + AluSx SINE Alu 1 113 -199 2423 73 0 25 chr5 71629081 71629395 -128000755 + AluY SINE Alu 1 306 -5 1839 101 34 98 chr5 71629395 71629615 -128000535 + AluSx SINE Alu 113 307 -5 1857 115 61 17 chr5 71630210 71630505 -127999645 - AluY SINE Alu -3 308 1 914 175 62 0 chr5 71630531 71630691 -127999459 - AluJb SINE Alu -6 306 137 255 279 0 16 chr5 71630882 71630943 -127999207 - MLT1J LTR MaLR -311 200 141 621 71 12 0 chr5 71630943 71631028 -127999122 + AluS SINE Alu 1 86 -226 5825 177 40 1 chr5 71631177 71632201 -127997949 + MSTA-int LTR MaLR 588 1651 0 1770 142 102 31 chr5 71632201 71632553 -127997597 + MSTA LTR MaLR 1 377 -51 271 274 126 15 chr5 71632587 71632722 -127997428 - L2 LINE L2 -3064 250 101 270 155 103 0 chr5 71632756 71632814 -127997336 - MER58 DNA MER1_type -16 2404 2341 252 157 42 0 chr5 71632813 71632872 -127997278 - MER58 DNA MER1_type -119 96 31 * 2391 89 3 0 chr5 71632943 71633246 -127996904 - AluSp SINE Alu -7 306 3 924 253 149 75 chr5 71633517 71634149 -127996001 + LTR41 LTR ERVL 7 590 -183 2259 149 8 0 chr5 71634149 71634511 -127995639 + MER47A DNA MER2_type 1 365 -1 2126 90 0 60 chr5 71634514 71634837 -127995313 - AluSx SINE Alu 0 305 1 924 253 149 75 chr5 71634837 71634910 -127995240 + LTR41 LTR ERVL 591 770 -3 525 121 36 121 chr5 71635196 71635336 -127994814 - L1MA9 LINE L1 0 6312 6185 2127 117 0 13 chr5 71635368 71635668 -127994482 - AluSx SINE Alu -14 298 3 1100 90 0 0 chr5 71635536 71635670 -127994480 - AluSq/x SINE Alu -178 134 1 189 0 0 0 chr5 71636478 71636499 -127993651 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr5 71636531 71636552 -127993598 + AT_rich Low_complexity Low_complexity 1 21 0 232 146 0 21 chr5 71637137 71637185 -127992965 - Alu SINE Alu -7 126 80 2645 58 0 0 chr5 71637196 71637507 -127992643 - AluY SINE Alu 0 311 1 604 176 0 0 chr5 71637511 71637602 -127992548 - FLAM_A SINE Alu -51 91 1 2297 118 0 3 chr5 71637838 71638151 -127991999 + AluSx SINE Alu 1 312 0 1689 175 17 10 chr5 71638439 71638730 -127991420 - AluJo SINE Alu -19 293 1 362 188 0 29 chr5 71639141 71639210 -127990940 - L2 LINE L2 -1 3271 3205 2545 65 0 0 chr5 71639440 71639746 -127990404 - AluY SINE Alu -5 306 1 235 322 56 61 chr5 71639842 71640056 -127990094 + L2 LINE L2 2824 3036 -236 1923 108 7 4 chr5 71640056 71640325 -127989825 + AluSq SINE Alu 44 313 0 258 129 43 57 chr5 71640326 71640396 -127989754 + L1ME3A LINE L1 6095 6163 -7 1272 236 69 28 chr5 71641321 71641716 -127988434 - L1MC4 LINE L1 -1140 6902 6486 2219 118 0 3 chr5 71641716 71642021 -127988129 - AluSx SINE Alu -8 304 1 1272 236 69 28 chr5 71642021 71642061 -127988089 - L1MC4 LINE L1 -1556 6486 6449 187 250 0 0 chr5 71642146 71642186 -127987964 + MER5A DNA MER1_type 149 188 -1 1657 171 33 23 chr5 71643057 71643362 -127986788 - AluJo SINE Alu -4 308 1 398 383 54 0 chr5 71643723 71643890 -127986260 + MIR3 SINE MIR 27 202 -6 2275 106 0 3 chr5 71643928 71644240 -127985910 + AluSx SINE Alu 1 311 -1 2272 107 0 10 chr5 71644256 71644565 -127985585 + AluSx SINE Alu 1 306 -6 198 240 0 0 chr5 71644644 71644694 -127985456 + (TA)n Simple_repeat Simple_repeat 1 50 0 1886 150 20 10 chr5 71644694 71644988 -127985162 - AluJo SINE Alu -15 297 1 267 75 57 0 chr5 71645332 71645385 -127984765 - AluSp/q SINE Alu 0 303 248 2041 117 4 7 chr5 71645401 71645682 -127984468 - AluSq SINE Alu -33 280 1 735 272 42 54 chr5 71645687 71645837 -127984313 + MIR SINE MIR 12 160 -102 2395 55 14 0 chr5 71645837 71646156 -127983994 + AluY SINE Alu 1 323 0 735 272 42 54 chr5 71646156 71646243 -127983907 + MIR SINE MIR 160 247 -15 2316 104 0 16 chr5 71646815 71647124 -127983026 + AluSg SINE Alu 1 304 -6 3089 157 92 69 chr5 71647131 71647692 -127982458 + L1MB4 LINE L1 4899 5445 -735 1836 158 3 41 chr5 71647692 71647786 -127982364 + AluJo SINE Alu 1 97 -215 2439 87 0 0 chr5 71647786 71648097 -127982053 + AluSx SINE Alu 1 311 -1 1836 158 3 41 chr5 71648097 71648319 -127981831 + AluJo SINE Alu 97 305 -7 2064 145 0 0 chr5 71648321 71648617 -127981533 + AluSx SINE Alu 1 296 -16 3089 157 92 69 chr5 71648617 71649158 -127980992 + L1MB4 LINE L1 5445 6033 -147 2283 97 3 3 chr5 71649158 71649468 -127980682 - AluSx SINE Alu -2 310 1 3089 157 92 69 chr5 71649468 71649618 -127980532 + L1MB4 LINE L1 6033 6178 -2 363 243 66 7 chr5 71649611 71649763 -127980387 + L1MDa LINE L1 1554 1714 -4826 * 334 224 103 36 chr5 71649765 71649931 -127980219 + L1 LINE L1 4337 4515 -1631 25 0 0 0 chr5 71650078 71650103 -127980047 + AT_rich Low_complexity Low_complexity 1 25 0 1947 148 0 3 chr5 71652697 71653018 -127977132 + AluJb SINE Alu 1 320 0 314 356 77 0 chr5 71654132 71654236 -127975914 + L2 LINE L2 3153 3264 -8 213 39 0 0 chr5 71654480 71654506 -127975644 + (TTG)n Simple_repeat Simple_repeat 2 27 0 723 172 0 37 chr5 71654508 71654642 -127975508 - FLAM_C SINE Alu -4 129 1 776 171 46 38 chr5 71654912 71655151 -127974999 + L1MD3 LINE L1 7755 7995 0 2004 141 0 20 chr5 71655166 71655470 -127974680 + AluSx SINE Alu 5 302 -10 2212 109 0 0 chr5 71655473 71655793 -127974357 + AluSq SINE Alu 1 320 0 1606 174 47 27 chr5 71655809 71656108 -127974042 + AluJb SINE Alu 2 306 -6 1197 186 186 0 chr5 71656364 71656617 -127973533 - AluSx SINE Alu -12 300 1 259 235 0 12 chr5 71656831 71656916 -127973234 + L1MDa LINE L1 1959 2042 -4679 2119 120 0 0 chr5 71656916 71657199 -127972951 + AluSg SINE Alu 1 283 -27 4971 116 24 20 chr5 71657200 71658037 -127972113 + L1PA14 LINE L1 5322 6161 0 28 0 0 0 chr5 71658210 71658238 -127971912 + AT_rich Low_complexity Low_complexity 1 28 0 587 312 162 41 chr5 71658642 71659155 -127970995 - L1MEd LINE L1 -5022 1097 523 29 70 0 0 chr5 71659619 71659676 -127970474 + AT_rich Low_complexity Low_complexity 1 57 0 190 365 84 39 chr5 71659699 71659877 -127970273 + MIR SINE MIR 60 245 -17 2404 208 69 54 chr5 71661466 71662224 -127967926 - MER4E LTR ERV1 -10 769 1 204 316 120 15 chr5 71662833 71662966 -127967184 - MIR SINE MIR -103 159 13 1530 121 93 89 chr5 71663407 71663714 -127966436 + AluSx SINE Alu 1 308 0 2156 91 3 10 chr5 71663872 71664197 -127965953 + AluY SINE Alu 1 311 0 23 0 0 0 chr5 71664314 71664337 -127965813 + AT_rich Low_complexity Low_complexity 1 23 0 549 192 121 0 chr5 71664394 71664592 -127965558 - L1MDa LINE L1 -3934 2606 2385 4420 166 42 21 chr5 71664603 71665466 -127964684 - Tigger3b DNA MER2_type -1803 1225 338 2167 51 0 0 chr5 71665466 71665721 -127964429 - AluY SINE Alu -10 301 47 4420 166 42 21 chr5 71665721 71665838 -127964312 - Tigger3b DNA MER2_type -2690 338 225 2087 166 11 21 chr5 71665838 71666217 -127963933 - THE1C LTR MaLR 0 375 1 8184 142 74 19 chr5 71666217 71667714 -127962436 - THE1C-int LTR MaLR 0 1580 1 1949 154 32 24 chr5 71667716 71668086 -127962064 - THE1C LTR MaLR -2 373 1 491 170 113 25 chr5 71668086 71668245 -127961905 - Tigger3b DNA MER2_type -1002 229 57 1443 118 17 12 chr5 71668373 71668632 -127961518 + LTR12 LTR ERV1 349 714 0 574 344 16 6 chr5 71669797 71669980 -127960170 - MIR3 SINE MIR -4 204 20 224 361 21 10 chr5 71670499 71670596 -127959554 - MIR SINE MIR -73 135 38 21 0 0 0 chr5 71671724 71671745 -127958405 + AT_rich Low_complexity Low_complexity 1 21 0 240 253 343 6 chr5 71673176 71673342 -127956808 + MIR SINE MIR 1 222 -40 756 184 0 27 chr5 71673499 71673646 -127956504 - FLAM_C SINE Alu 0 143 1 198 255 0 0 chr5 71674366 71674417 -127955733 - MIR SINE MIR -121 141 91 1298 124 38 0 chr5 71674888 71675097 -127955053 - L1PA15 LINE L1 -7 6158 5942 23 0 0 0 chr5 71676550 71676573 -127953577 + AT_rich Low_complexity Low_complexity 1 23 0 401 248 162 10 chr5 71677754 71678004 -127952146 + L2 LINE L2 2749 3030 -283 2402 156 17 57 chr5 71678054 71678418 -127951732 - L1PB4 LINE L1 -22 6134 5796 2132 124 0 7 chr5 71678418 71678724 -127951426 - AluSx SINE Alu -8 304 1 2402 156 17 57 chr5 71678724 71678884 -127951266 - L1PB4 LINE L1 -360 5796 5631 329 274 75 27 chr5 71679015 71679161 -127950989 + L2 LINE L2 3161 3313 0 275 294 129 22 chr5 71679295 71679567 -127950583 + L2 LINE L2 1862 2162 -1152 664 185 8 31 chr5 71679570 71679700 -127950450 - FLAM_C SINE Alu -16 127 1 196 107 0 0 chr5 71679944 71679972 -127950178 + L2 LINE L2 518 545 -2769 378 311 89 21 chr5 71680016 71680251 -127949899 + MIR SINE MIR 12 262 0 21 0 0 0 chr5 71680391 71680412 -127949738 + AT_rich Low_complexity Low_complexity 1 21 0 1269 134 21 21 chr5 71680613 71680852 -127949298 + L1MA8 LINE L1 6050 6288 -3 197 228 53 35 chr5 71681411 71681468 -127948682 + L2 LINE L2 3187 3244 -69 2124 69 0 0 chr5 71681614 71681874 -127948276 - AluY SINE Alu -5 306 47 459 183 17 0 chr5 71681876 71681991 -127948159 - Tigger3(Golem) DNA MER2_type -2688 341 225 2064 166 11 24 chr5 71681991 71682371 -127947779 - THE1C LTR MaLR 0 375 1 8124 141 74 20 chr5 71682371 71683870 -127946280 - THE1C-int LTR MaLR 0 1580 1 2003 156 27 24 chr5 71683872 71684244 -127945906 - THE1C LTR MaLR -2 373 1 1169 181 31 22 chr5 71684244 71684471 -127945679 - Tigger3(Golem) DNA MER2_type -2800 229 1 2285 255 81 33 chr5 71684488 71685635 -127944515 - L1MDa LINE L1 -4180 2360 1145 2286 119 6 3 chr5 71685635 71685946 -127944204 - AluSx SINE Alu 0 312 1 2285 255 81 33 chr5 71685946 71686071 -127944079 - L1MDa LINE L1 -5395 1145 1027 23 0 0 0 chr5 71686537 71686560 -127943590 + AT_rich Low_complexity Low_complexity 1 23 0 239 265 48 12 chr5 71686949 71687032 -127943118 + MIR3 SINE MIR 114 199 -9 447 256 16 8 chr5 71687187 71687308 -127942842 + MER45A DNA AcHobo 57 178 0 2197 123 52 30 chr5 71687825 71688192 -127941958 - THE1C LTR MaLR 0 375 1 226 263 26 0 chr5 71688415 71688491 -127941659 - L1MC4 LINE L1 -1351 6691 6614 312 27 0 0 chr5 71688682 71688719 -127941431 + (TG)n Simple_repeat Simple_repeat 2 38 0 1098 220 43 24 chr5 71688723 71689163 -127940987 - MLT1D LTR MaLR 0 505 1 234 136 0 0 chr5 71690230 71690274 -127939876 + (GA)n Simple_repeat Simple_repeat 1 44 0 1922 134 46 0 chr5 71690843 71691001 -127939149 - AluSx SINE Alu -16 296 118 207 0 0 0 chr5 71691001 71691024 -127939126 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1922 134 46 0 chr5 71691024 71691148 -127939002 - AluSx SINE Alu -194 118 1 227 325 70 26 chr5 71691951 71692217 -127937933 - L1MC4 LINE L1 -516 5818 5566 332 48 63 0 chr5 71692333 71692396 -127937754 + (TA)n Simple_repeat Simple_repeat 1 67 0 201 372 0 13 chr5 71692513 71692591 -127937559 + L2 LINE L2 3000 3076 -196 234 368 0 0 chr5 71692686 71692754 -127937396 + L2 LINE L2 3138 3205 -67 1943 224 176 24 chr5 71692861 71693456 -127936694 - MER76 LTR ERV -2 686 1 1691 163 40 72 chr5 71694065 71694439 -127935711 - THE1B LTR MaLR -2 362 1 222 370 19 9 chr5 71694584 71694692 -127935458 + L2 LINE L2 3199 3307 -6 5135 125 26 5 chr5 71694810 71695611 -127934539 + L1MA3 LINE L1 5453 6270 -35 32 0 0 0 chr5 71695726 71695758 -127934392 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr5 71695820 71695844 -127934306 + AT_rich Low_complexity Low_complexity 1 24 0 209 178 44 0 chr5 71697108 71697153 -127932997 + GA-rich Low_complexity Low_complexity 1 47 0 2002 157 3 0 chr5 71697672 71697972 -127932178 + AluSx SINE Alu 1 301 -11 365 285 17 23 chr5 71699669 71699841 -127930309 + L1PB1 LINE L1 5935 6105 -46 353 335 0 7 chr5 71700089 71700241 -127929909 + AluYa5 SINE Alu 131 281 -20 299 185 15 15 chr5 71701621 71701686 -127928464 - MER3 DNA MER1_type 0 209 145 1399 272 91 42 chr5 71702379 71702837 -127927313 - L1M4 LINE L1 -1150 4996 4562 2694 141 24 12 chr5 71702837 71703256 -127926894 - MSTA LTR MaLR 0 428 5 1399 272 91 42 chr5 71703256 71703886 -127926264 - L1M4 LINE L1 -1584 4562 3855 23 0 0 0 chr5 71704118 71704141 -127926009 + AT_rich Low_complexity Low_complexity 1 23 0 1875 161 10 3 chr5 71704685 71704995 -127925155 - AluSx SINE Alu 0 312 1 189 0 0 0 chr5 71705291 71705312 -127924838 + (TG)n Simple_repeat Simple_repeat 2 22 0 237 215 15 15 chr5 71705332 71705397 -127924753 + (TA)n Simple_repeat Simple_repeat 1 65 0 333 68 0 0 chr5 71705404 71705448 -127924702 + (TG)n Simple_repeat Simple_repeat 1 44 0 157 52 0 0 chr5 71706518 71706710 -127923440 + AT_rich Low_complexity Low_complexity 1 192 0 21 0 0 0 chr5 71707055 71707076 -127923074 + AT_rich Low_complexity Low_complexity 1 21 0 1836 101 3 44 chr5 71707518 71707835 -127922315 - AluSq SINE Alu 0 313 10 1600 217 156 17 chr5 71708810 71709387 -127920763 + L1MC4 LINE L1 7161 7817 -225 2149 107 27 0 chr5 71709387 71709687 -127920463 + L1PA16 LINE L1 5525 5832 -334 1386 84 0 0 chr5 71709687 71709854 -127920296 + AluY SINE Alu 1 167 -144 1526 121 0 0 chr5 71711360 71711558 -127918592 + AluSg/x SINE Alu 80 277 -33 271 317 40 0 chr5 71713462 71713563 -127916587 + MIR3 SINE MIR 75 179 -29 2181 105 6 16 chr5 71713827 71714141 -127916009 + AluSx SINE Alu 1 311 -1 415 262 79 8 chr5 71714538 71714664 -127915486 - MIR SINE MIR -114 148 14 246 192 0 0 chr5 71715414 71715466 -127914684 + (TCCA)n Simple_repeat Simple_repeat 3 54 0 210 340 52 65 chr5 71715525 71715678 -127914472 - L2 LINE L2 -99 3173 3023 207 277 50 0 chr5 71716735 71716854 -127913296 + (TA)n Simple_repeat Simple_repeat 2 126 0 1827 138 10 24 chr5 71717002 71717292 -127912858 - AluSx SINE Alu -26 286 1 248 306 12 35 chr5 71718038 71718123 -127912027 - L2 LINE L2 -8 3264 3182 448 272 19 32 chr5 71718237 71718415 -127911735 - MIR SINE MIR -63 145 16 197 339 15 0 chr5 71719096 71719161 -127910989 - MIR3 SINE MIR -39 169 104 261 241 19 0 chr5 71719416 71719470 -127910680 - MLT-int LTR MaLR -500 1235 1181 4177 230 42 38 chr5 71719470 71720582 -127909568 - MSTC-int LTR MaLR -617 1118 2 336 120 280 0 chr5 71720584 71720659 -127909491 - MSTC LTR MaLR 0 396 301 960 162 68 18 chr5 71720774 71720996 -127909154 + Tigger3(Golem) DNA MER2_type 2790 3022 -7 554 196 144 0 chr5 71721006 71721200 -127908950 + L1MDa LINE L1 2385 2606 -3934 23 0 0 0 chr5 71721254 71721277 -127908873 + AT_rich Low_complexity Low_complexity 1 23 0 2085 95 10 7 chr5 71721393 71721715 -127908435 - AluY SINE Alu 0 311 1 225 0 0 0 chr5 71721866 71721891 -127908259 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1341 117 113 88 chr5 71721893 71722167 -127907983 - AluSx SINE Alu -31 281 1 234 182 45 0 chr5 71722328 71722394 -127907756 + (TTA)n Simple_repeat Simple_repeat 3 71 0 183 313 0 30 chr5 71722850 71722917 -127907233 + L2 LINE L2 3141 3205 -67 1900 223 180 24 chr5 71723024 71723617 -127906533 - MER76 LTR ERV -2 686 1 1733 195 27 54 chr5 71723824 71724031 -127906119 - MER82 DNA MER2_type -254 399 207 1951 140 7 3 chr5 71724031 71724317 -127905833 - AluSx SINE Alu -25 287 1 1733 195 27 54 chr5 71724317 71724519 -127905631 - MER82 DNA MER2_type -446 207 1 1376 162 83 10 chr5 71724525 71724827 -127905323 - Looper DNA T2_type -73 1485 1162 322 203 33 12 chr5 71724835 71724932 -127905218 - FLAM_A SINE Alu 0 133 49 918 129 22 0 chr5 71725117 71725256 -127904894 + AluJb SINE Alu 1 142 -170 1514 75 11 0 chr5 71725930 71726149 -127904001 - AluY SINE Alu 0 313 93 25 0 0 0 chr5 71727492 71727517 -127902633 + AT_rich Low_complexity Low_complexity 1 25 0 1241 154 45 61 chr5 71728620 71728932 -127901218 - Looper DNA T2_type -382 1176 870 1764 234 126 133 chr5 71728943 71729549 -127900601 - L2 LINE L2 -338 2976 2248 741 157 15 22 chr5 71729549 71729683 -127900467 + AluJo SINE Alu 2 134 -178 1764 234 126 133 chr5 71729683 71730158 -127899992 - L2 LINE L2 -1066 2248 1771 812 169 0 0 chr5 71730588 71730724 -127899426 + AluSp/q SINE Alu 164 299 -14 26 74 0 0 chr5 71730724 71730778 -127899372 + AT_rich Low_complexity Low_complexity 1 54 0 573 253 25 38 chr5 71730853 71731011 -127899139 - MIR SINE MIR -100 162 7 220 315 33 33 chr5 71731161 71731253 -127898897 - L2 LINE L2 -25 3247 3156 542 282 40 73 chr5 71731295 71731543 -127898607 - L2 LINE L2 -3 3269 3030 675 260 84 13 chr5 71731664 71731891 -127898259 - MIR SINE MIR 0 262 20 415 214 159 16 chr5 71732013 71732139 -127898011 + MER63 DNA MER1_type 1 770 -292 2095 120 0 23 chr5 71732662 71732962 -127897188 - AluSx SINE Alu -19 293 1 348 368 8 0 chr5 71733418 71733551 -127896599 + MIR3 SINE MIR 60 193 -15 308 259 12 12 chr5 71734479 71734564 -127895586 + L2 LINE L2 3168 3252 -61 216 0 0 0 chr5 71734565 71734589 -127895561 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 1665 168 31 24 chr5 71734972 71735263 -127894887 - AluJo SINE Alu -19 293 1 364 188 0 29 chr5 71735674 71735743 -127894407 - L2 LINE L2 -1 3271 3205 2702 46 0 0 chr5 71735973 71736279 -127893871 - AluY SINE Alu -5 306 1 545 273 113 43 chr5 71736544 71736775 -127893375 - MIR SINE MIR -5 257 11 2154 118 3 6 chr5 71737043 71737356 -127892794 + AluSp SINE Alu 1 312 -1 1245 141 14 19 chr5 71737356 71737569 -127892581 + L1P3 LINE L1 44 255 -6206 795 42 21 0 chr5 71737742 71737838 -127892312 - L1P1 LINE L1 -511 5644 5547 * 18843 26 2 0 chr5 71737831 71740057 -127890093 + L1P LINE L1 2648 4876 -1270 1401 73 0 0 chr5 71740562 71740741 -127889409 + AluY SINE Alu 120 298 -13 2260 92 7 0 chr5 71741460 71741766 -127888384 - AluSx SINE Alu -4 308 1 2200 97 0 0 chr5 71742278 71742567 -127887583 + AluSx SINE Alu 1 289 -23 2145 79 10 3 chr5 71743019 71743310 -127886840 + AluSx SINE Alu 1 293 -19 996 136 0 37 chr5 71743410 71743572 -127886578 - FRAM SINE Alu -21 155 1 1963 130 10 0 chr5 71745240 71745532 -127884618 + AluSx SINE Alu 1 295 -17 478 148 0 25 chr5 71745945 71746026 -127884124 - AluJo SINE Alu -148 164 86 298 212 280 25 chr5 71746064 71746182 -127883968 - MLT1K LTR MaLR -284 304 157 1956 148 0 10 chr5 71746552 71746863 -127883287 + AluSx SINE Alu 1 308 -4 877 179 0 0 chr5 71746864 71747015 -127883135 + AluJo/FRAM SINE Alu 138 288 -24 180 0 0 0 chr5 71747019 71747039 -127883111 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 303 254 166 55 chr5 71747042 71747223 -127882927 + MLT1K LTR MaLR 341 541 -47 811 114 0 45 chr5 71747232 71747364 -127882786 - FLAM_C SINE Alu -3 130 5 690 234 75 54 chr5 71747705 71747983 -127882167 + L1ME3 LINE L1 5863 6146 -16 451 286 105 49 chr5 71748420 71748642 -127881508 + L1MC/D LINE L1 5541 5782 -2026 1924 123 26 23 chr5 71748642 71748951 -127881199 + AluSx SINE Alu 1 310 -2 451 286 105 49 chr5 71748951 71748994 -127881156 + L1MC/D LINE L1 5782 5821 -1987 21 0 0 0 chr5 71749008 71749029 -127881121 + AT_rich Low_complexity Low_complexity 1 21 0 1828 166 0 0 chr5 71749113 71749414 -127880736 - AluJo SINE Alu -11 301 1 705 126 0 0 chr5 71749792 71749895 -127880255 + U13 snRNA snRNA 2 104 0 1201 194 7 26 chr5 71749939 71750212 -127879938 + AluJo SINE Alu 38 305 -7 2225 95 0 7 chr5 71750448 71750754 -127879396 + AluSx SINE Alu 1 304 -8 1788 94 109 54 chr5 71750919 71751250 -127878900 + Tigger3b DNA MER2_type 196 544 -687 189 0 0 0 chr5 71751255 71751276 -127878874 + (TG)n Simple_repeat Simple_repeat 2 22 0 520 104 52 0 chr5 71751279 71751356 -127878794 - AluJ/FRAM SINE Alu -16 296 216 286 167 0 0 chr5 71751356 71751398 -127878752 - Alu SINE Alu -260 42 1 231 159 0 29 chr5 71751398 71751464 -127878686 + Tigger3b DNA MER2_type 531 594 -637 414 145 0 0 chr5 71751464 71751526 -127878624 + AluS SINE Alu 32 93 -219 1615 144 0 88 chr5 71751527 71751866 -127878284 + AluJo SINE Alu 1 309 -3 439 187 0 33 chr5 71751950 71752041 -127878109 - FLAM_A SINE Alu -53 89 2 2317 84 0 0 chr5 71752058 71752369 -127877781 - AluY SINE Alu 0 311 1 2127 117 0 0 chr5 71752369 71752667 -127877483 - AluSx SINE Alu -14 298 1 2816 104 150 27 chr5 71752667 71752911 -127877239 + Tigger3b DNA MER2_type 649 862 -2167 261 0 0 0 chr5 71752911 71752940 -127877210 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1929 89 33 4 chr5 71752940 71753210 -127876940 - AluSp SINE Alu -32 281 4 2816 104 150 27 chr5 71753210 71753483 -127876667 + Tigger3b DNA MER2_type 861 1231 -1 426 174 81 0 chr5 71754736 71754822 -127875328 - MER5A DNA MER1_type -95 94 2 553 43 0 0 chr5 71755106 71755175 -127874975 + AluY SINE Alu 2 70 -248 2271 154 50 90 chr5 71755178 71755478 -127874672 - Looper DNA T2_type -90 1468 1204 590 203 49 8 chr5 71755478 71755601 -127874549 - FLAM_A SINE Alu -3 130 3 2271 154 50 90 chr5 71755601 71755924 -127874226 - Looper DNA T2_type -354 1204 870 2242 222 125 135 chr5 71755935 71756543 -127873607 - L2 LINE L2 -338 2976 2250 823 157 0 8 chr5 71756543 71756677 -127873473 + AluJo SINE Alu 2 134 -178 2242 222 125 135 chr5 71756677 71757153 -127872997 - L2 LINE L2 -1064 2250 1771 310 270 175 0 chr5 71757332 71757469 -127872681 - L2 LINE L2 -2944 370 210 1484 116 23 9 chr5 71757474 71757690 -127872460 + MSTA LTR MaLR 210 428 0 9148 164 36 10 chr5 71757690 71757831 -127872319 + MSTA-int LTR MaLR 1 137 -1514 2284 87 3 7 chr5 71757831 71758141 -127872009 - AluSx SINE Alu -2 310 2 9148 164 36 10 chr5 71758141 71759608 -127870542 + MSTA-int LTR MaLR 137 1651 0 1832 144 99 31 chr5 71759608 71759961 -127870189 + MSTA LTR MaLR 1 377 -51 283 274 126 15 chr5 71759995 71760130 -127870020 - L2 LINE L2 -3064 250 101 295 136 85 0 chr5 71760164 71760223 -127869927 - MER58 DNA MER1_type -16 2404 2341 257 146 0 0 chr5 71760224 71760265 -127869885 - MER58 DNA MER1_type -2326 94 54 2253 93 3 0 chr5 71760352 71760652 -127869498 - AluSp SINE Alu -12 301 1 1028 242 158 83 chr5 71760921 71761553 -127868597 + LTR41 LTR ERVL 7 590 -183 2284 149 8 0 chr5 71761553 71761915 -127868235 + MER47A DNA MER2_type 1 365 -1 2031 90 0 60 chr5 71761918 71762241 -127867909 - AluSx SINE Alu 0 305 1 1028 242 158 83 chr5 71762241 71762314 -127867836 + LTR41 LTR ERVL 591 770 -3 316 283 69 48 chr5 71762450 71762595 -127867555 - L1ME4a LINE L1 0 6121 5974 532 121 36 121 chr5 71762600 71762740 -127867410 - L1MA9 LINE L1 0 6312 6185 2021 123 0 13 chr5 71762772 71763074 -127867076 - AluSx SINE Alu -14 298 1 189 0 0 0 chr5 71763904 71763925 -127866225 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr5 71763957 71763978 -127866172 + AT_rich Low_complexity Low_complexity 1 21 0 627 165 0 0 chr5 71764158 71764249 -127865901 - FLAM_A SINE Alu -51 91 1 766 134 27 0 chr5 71764492 71764604 -127865546 + AluSq/x SINE Alu 8 122 -191 2006 99 3 75 chr5 71764853 71765186 -127864964 - AluSq SINE Alu -4 309 1 730 271 42 58 chr5 71765191 71765342 -127864808 + MIR SINE MIR 12 160 -102 2290 55 14 0 chr5 71765342 71765662 -127864488 + AluY SINE Alu 2 325 0 730 271 42 58 chr5 71765662 71765749 -127864401 + MIR SINE MIR 160 247 -15 2288 93 0 16 chr5 71766321 71766633 -127863517 + AluSg SINE Alu 1 307 -3 1728 176 138 32 chr5 71766633 71767207 -127862943 + L1M4 LINE L1 4886 5486 -698 1600 155 9 44 chr5 71767210 71767304 -127862846 + AluJo SINE Alu 1 97 -215 2325 80 3 3 chr5 71767304 71767616 -127862534 + AluSx SINE Alu 1 312 0 1600 155 9 44 chr5 71767616 71767837 -127862313 + AluJo SINE Alu 97 305 -7 466 257 49 7 chr5 71767844 71767988 -127862162 + AluJo SINE Alu 6 155 -157 250 202 20 40 chr5 71771541 71771640 -127858510 + (CACAA)n Simple_repeat Simple_repeat 5 101 0 1654 76 5 5 chr5 71774256 71774479 -127855671 - AluSc SINE Alu -86 223 1 855 220 0 0 chr5 71774628 71774787 -127855363 + AluJo SINE Alu 138 296 -6 1910 74 4 0 chr5 71774789 71775032 -127855118 + AluSp SINE Alu 44 287 -26 378 231 93 8 chr5 71775039 71775198 -127854952 + AluSp SINE Alu 1 153 -150 567 227 168 30 chr5 71776148 71776351 -127853799 - MIR SINE MIR -12 250 20 222 128 0 0 chr5 71780921 71780960 -127849190 + (G)n Simple_repeat Simple_repeat 1 39 0 318 204 102 51 chr5 71781473 71781610 -127848540 - L1 LINE L1 -1169 4977 4838 2124 117 3 0 chr5 71781841 71782150 -127848000 + AluSx SINE Alu 1 310 -2 1319 118 212 12 chr5 71782319 71782574 -127847576 + AluSg1 SINE Alu 1 306 -3 2093 97 10 0 chr5 71782628 71782917 -127847233 + AluSx SINE Alu 1 292 -20 560 186 8 39 chr5 71783227 71783356 -127846794 + FLAM_C SINE Alu 2 126 -17 1947 114 0 27 chr5 71783382 71783705 -127846445 + AluSx SINE Alu 3 312 0 2166 88 3 3 chr5 71783759 71784054 -127846096 + AluSg SINE Alu 1 295 -15 992 152 30 40 chr5 71784064 71784262 -127845888 + AluJb SINE Alu 84 279 -33 2175 105 0 0 chr5 71784262 71784557 -127845593 + AluSx SINE Alu 3 297 -15 887 188 61 20 chr5 71784573 71784770 -127845380 - L1ME3 LINE L1 -13 6149 5945 1306 121 26 4 chr5 71784779 71785010 -127845140 - AluY SINE Alu -8 303 68 459 97 66 33 chr5 71785520 71786156 -127843994 + (TA)n Simple_repeat Simple_repeat 1 656 0 2235 78 3 0 chr5 71786156 71786440 -127843710 - AluSg SINE Alu -25 285 1 687 174 14 42 chr5 71786441 71786585 -127843565 - AluJo SINE Alu -171 141 2 83 29 0 0 chr5 71786661 71786765 -127843385 + AT_rich Low_complexity Low_complexity 1 104 0 931 135 0 0 chr5 71787188 71787321 -127842829 + FLAM_C SINE Alu 1 133 0 1397 103 0 10 chr5 71787392 71787596 -127842554 + AluSq SINE Alu 1 202 -111 258 317 0 35 chr5 71787915 71788057 -127842093 + A-rich Low_complexity Low_complexity 2 138 0 249 33 0 0 chr5 71788322 71788352 -127841798 + (TG)n Simple_repeat Simple_repeat 1 30 0 2401 75 0 35 chr5 71788849 71789168 -127840982 + AluY SINE Alu 1 308 -3 1519 107 26 93 chr5 71789393 71789489 -127840661 - L1M3 LINE L1 -630 5550 5449 2126 104 11 0 chr5 71789489 71789787 -127840363 + AluSx SINE Alu 2 302 0 1519 107 26 93 chr5 71789787 71789926 -127840224 - L1M3 LINE L1 -731 5449 5337 2155 82 20 14 chr5 71789926 71790219 -127839931 - AluY SINE Alu -16 295 1 1519 107 26 93 chr5 71790219 71790291 -127839859 - L1M3 LINE L1 -843 5337 5262 1222 112 10 39 chr5 71790603 71790808 -127839342 + AluSg/x SINE Alu 96 294 -18 318 264 62 105 chr5 71791087 71791328 -127838822 - L1ME3A LINE L1 -207 5963 5713 2116 137 0 0 chr5 71791328 71791621 -127838529 - AluSx SINE Alu -4 308 16 318 264 62 105 chr5 71791621 71791747 -127838403 - L1ME3A LINE L1 -457 5713 5609 2380 67 0 0 chr5 71791747 71792053 -127838097 - AluY SINE Alu 0 306 1 318 264 62 105 chr5 71792053 71792096 -127838054 - L1ME3A LINE L1 -561 5609 5566 507 230 164 24 chr5 71792737 71792902 -127837248 - MER5A DNA MER1_type 0 189 2 2034 124 16 6 chr5 71793342 71793656 -127836494 - MER49 LTR ERV1 -32 891 575 1188 69 7 0 chr5 71793664 71793808 -127836342 + AluSq/x SINE Alu 1 145 -168 773 161 4 128 chr5 71793943 71794083 -127836067 + L1MC3 LINE L1 7574 7673 -112 1762 155 7 48 chr5 71794083 71794393 -127835757 + AluJo SINE Alu 12 308 -4 773 161 4 128 chr5 71794393 71794494 -127835656 + L1MC3 LINE L1 7673 7785 0 366 192 48 48 chr5 71794560 71794664 -127835486 + L1MB8 LINE L1 6075 6178 0 747 191 0 0 chr5 71794980 71795111 -127835039 + FLAM_C SINE Alu 3 133 0 924 147 19 25 chr5 71795469 71795626 -127834524 - FRAM SINE Alu -23 153 1 677 288 93 19 chr5 71795627 71795940 -127834210 + L1MC4a LINE L1 5587 5922 -1886 2155 107 39 0 chr5 71795977 71796258 -127833892 + AluSx SINE Alu 1 292 -20 184 237 68 17 chr5 71796281 71796340 -127833810 - MIR SINE MIR -9 253 192 558 154 0 19 chr5 71796341 71796445 -127833705 + FRAM SINE Alu 75 176 0 2255 87 24 0 chr5 71796522 71796810 -127833340 + AluSg SINE Alu 1 295 -15 2026 136 10 0 chr5 71796855 71797157 -127832993 + AluSx SINE Alu 1 305 -7 1377 178 35 0 chr5 71797167 71797398 -127832752 - MER8 DNA MER2_type 0 239 1 25 0 0 0 chr5 71797435 71797460 -127832690 + AT_rich Low_complexity Low_complexity 1 25 0 2377 84 3 0 chr5 71797840 71798136 -127832014 + AluSq SINE Alu 5 301 -12 1744 178 27 0 chr5 71798199 71798492 -127831658 - AluJo SINE Alu -11 301 1 2253 234 117 29 chr5 71798539 71799440 -127830710 - HAL1 LINE L1 -191 2316 1337 639 229 0 0 chr5 71799440 71799571 -127830579 - FLAM_C SINE Alu -11 132 2 731 220 80 28 chr5 71799576 71799826 -127830324 - HAL1 LINE L1 -1162 1345 1083 406 292 143 29 chr5 71799824 71800240 -127829910 + L1MC4a LINE L1 5388 5788 -333 * 540 75 0 0 chr5 71800250 71800317 -127829833 + AluSp/q SINE Alu 225 291 -22 897 134 29 2 chr5 71800323 71800482 -127829668 + L1M3 LINE L1 5660 5831 -337 813 212 0 7 chr5 71800495 71800646 -127829504 + AluJb SINE Alu 141 290 -22 520 274 0 7 chr5 71800653 71800799 -127829351 - AluJb SINE Alu -30 282 138 2000 132 0 43 chr5 71801385 71801711 -127828439 + AluSx SINE Alu 1 312 0 325 81 32 32 chr5 71801713 71801775 -127828375 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 188 128 0 43 chr5 71802462 71802509 -127827641 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 1655 135 3 52 chr5 71802552 71802656 -127827494 + AluJb SINE Alu 33 141 -171 2303 86 0 16 chr5 71802656 71802959 -127827191 + AluY SINE Alu 1 298 -13 1655 135 3 52 chr5 71802959 71803142 -127827008 + AluJb SINE Alu 141 306 -6 1949 166 3 7 chr5 71803245 71803552 -127826598 - AluJb SINE Alu -6 306 1 26 30 0 0 chr5 71803558 71803591 -127826559 + AT_rich Low_complexity Low_complexity 1 33 0 1707 64 0 0 chr5 71803707 71803949 -127826201 - AluY SINE Alu 0 322 81 343 244 23 23 chr5 71804508 71804594 -127825556 - L2 LINE L2 0 3313 3228 1817 141 30 14 chr5 71804711 71805008 -127825142 - AluJb SINE Alu -10 302 1 388 178 0 0 chr5 71805009 71805082 -127825068 + L1MC/D LINE L1 5362 5434 -2374 1457 159 0 37 chr5 71805085 71805330 -127824820 + AluJo SINE Alu 1 236 -76 23 0 0 0 chr5 71805717 71805740 -127824410 + AT_rich Low_complexity Low_complexity 1 23 0 1967 122 0 17 chr5 71805746 71806033 -127824117 - AluSx SINE Alu -30 282 1 331 244 0 0 chr5 71806038 71806116 -127824034 + MIR SINE MIR 48 125 -137 792 172 0 63 chr5 71806119 71806293 -127823857 - FRAM SINE Alu -3 163 1 2388 97 0 0 chr5 71806304 71806612 -127823538 - AluSg SINE Alu -2 308 1 1677 163 22 56 chr5 71807024 71807216 -127822934 - AluJb SINE Alu 0 312 134 2178 129 0 0 chr5 71807216 71807510 -127822640 - AluSx SINE Alu -18 294 1 1677 163 22 56 chr5 71807510 71807637 -127822513 - AluJb SINE Alu -178 134 4 1936 131 44 10 chr5 71808353 71808650 -127821500 - AluSc SINE Alu -1 308 2 2310 78 7 7 chr5 71808662 71808956 -127821194 - AluY SINE Alu -17 294 1 275 240 193 20 chr5 71809194 71809344 -127820806 - LTR33 LTR ERVL -4 517 342 1899 163 17 0 chr5 71809380 71809674 -127820476 + AluJb SINE Alu 1 299 -13 2293 90 13 7 chr5 71809881 71810191 -127819959 - AluSq SINE Alu -1 312 1 2124 106 31 3 chr5 71810221 71810513 -127819637 - AluSx SINE Alu -12 300 1 765 133 22 0 chr5 71810530 71810665 -127819485 - L1MB7 LINE L1 -19 6165 6028 1086 165 22 0 chr5 71810833 71811015 -127819135 + AluJo SINE Alu 127 312 0 2120 88 19 0 chr5 71811068 71811365 -127818785 - AluSq SINE Alu 0 320 19 1983 152 7 0 chr5 71811394 71811690 -127818460 + AluSx SINE Alu 1 298 -14 27 0 0 0 chr5 71811695 71811722 -127818428 + AT_rich Low_complexity Low_complexity 1 27 0 236 277 107 27 chr5 71811978 71812090 -127818060 - MIR SINE MIR -22 240 120 213 209 0 0 chr5 71812090 71812133 -127818017 + MIR SINE MIR 72 114 -148 1857 138 20 14 chr5 71812725 71813021 -127817129 + AluJb SINE Alu 1 298 -14 806 173 0 15 chr5 71813070 71813203 -127816947 - FLAM_A SINE Alu -2 131 1 436 104 15 0 chr5 71813237 71813304 -127816846 + L1MC1 LINE L1 6266 6333 0 1663 103 0 30 chr5 71813594 71813828 -127816322 - AluSg/x SINE Alu -1 309 83 647 177 43 0 chr5 71814296 71814437 -127815713 + MIR SINE MIR 52 198 -64 2540 73 0 3 chr5 71814749 71815052 -127815098 - AluY SINE Alu -9 302 1 2244 111 3 3 chr5 71815124 71815421 -127814729 - AluSq SINE Alu -15 298 2 234 0 0 0 chr5 71815934 71815960 -127814190 + (A)n Simple_repeat Simple_repeat 1 26 0 1766 193 129 14 chr5 71816339 71816758 -127813392 - MLT1C LTR MaLR 0 467 1 2011 101 6 89 chr5 71816828 71817155 -127812995 - AluSx SINE Alu -12 300 1 25 31 0 0 chr5 71817429 71817461 -127812689 + AT_rich Low_complexity Low_complexity 1 32 0 207 0 0 0 chr5 71817571 71817594 -127812556 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2020 158 0 0 chr5 71817615 71817907 -127812243 - AluSx SINE Alu -20 292 1 2161 122 3 13 chr5 71817950 71818261 -127811889 - AluSx SINE Alu -4 308 1 288 288 110 0 chr5 71818425 71818543 -127811607 + MIR SINE MIR 70 200 -62 1561 157 4 19 chr5 71818717 71818984 -127811166 + AluSx SINE Alu 1 263 -49 21 0 0 0 chr5 71819202 71819223 -127810927 + AT_rich Low_complexity Low_complexity 1 21 0 2097 115 0 7 chr5 71819232 71819542 -127810608 + AluSx SINE Alu 1 308 0 2157 129 0 0 chr5 71819544 71819855 -127810295 + AluY SINE Alu 1 311 0 1746 132 26 11 chr5 71820180 71820452 -127809698 - AluJb SINE Alu -21 291 16 2045 113 0 7 chr5 71821734 71822009 -127808141 + AluSx SINE Alu 21 293 -19 180 0 0 0 chr5 71822009 71822029 -127808121 + (TA)n Simple_repeat Simple_repeat 2 21 0 1786 186 0 13 chr5 71822243 71822550 -127807600 - AluJb SINE Alu -9 303 1 5635 70 76 12 chr5 71822783 71823586 -127806564 + SVA Other Other 5 858 -528 1050 129 41 0 chr5 71823693 71823863 -127806287 - AluSg SINE Alu -133 177 1 360 145 0 0 chr5 71823917 71823979 -127806171 - AluSx SINE Alu -1 301 240 6474 71 12 1 chr5 71823981 71824798 -127805352 + LTR12 LTR ERV1 1 826 0 1668 153 0 0 chr5 71824798 71825039 -127805111 - AluSx SINE Alu -71 241 1 26 30 0 0 chr5 71825045 71825078 -127805072 + AT_rich Low_complexity Low_complexity 1 33 0 454 278 151 45 chr5 71825342 71825694 -127804456 - MLT1K LTR MaLR 0 588 200 2426 84 3 3 chr5 71825792 71826103 -127804047 - AluY SINE Alu 0 311 1 2190 155 15 35 chr5 71826199 71826599 -127803551 - LOR1b LTR ERV1 0 461 70 2269 168 16 18 chr5 71826743 71827100 -127803050 + MSTB LTR MaLR 1 358 -68 2441 94 0 0 chr5 71827100 71827409 -127802741 - AluSq SINE Alu -4 309 1 2269 168 16 18 chr5 71827409 71827438 -127802712 + MSTB LTR MaLR 358 386 -40 1907 126 65 0 chr5 71827770 71828047 -127802103 - AluSq SINE Alu -18 295 1 371 93 37 0 chr5 71828076 71828130 -127802020 + MSTB LTR MaLR 371 426 0 3379 92 0 0 chr5 71828188 71828655 -127801495 + L1PA8 LINE L1 4722 5188 -958 7037 59 4 20 chr5 71828778 71829705 -127800445 + L1PA8 LINE L1 5254 6165 -7 865 97 0 0 chr5 71829955 71830069 -127800081 - FLAM_C SINE Alu -15 118 5 1554 203 17 7 chr5 71830073 71830363 -127799787 - AluJo SINE Alu -19 293 1 2465 79 3 3 chr5 71830496 71830799 -127799351 - AluSp SINE Alu -10 303 1 319 229 89 64 chr5 71830853 71831010 -127799140 + MIR SINE MIR 37 197 -65 2046 165 161 66 chr5 71831013 71831063 -127799087 - LTR49 LTR ERV1 -11 584 540 1599 135 90 0 chr5 71831063 71831308 -127798842 + AluSx SINE Alu 1 267 -45 2046 165 161 66 chr5 71831308 71831790 -127798360 - LTR49 LTR ERV1 -55 540 1 1751 183 0 20 chr5 71831873 71832179 -127797971 - AluJo SINE Alu -12 300 1 245 275 127 48 chr5 71832242 71832431 -127797719 + MLT1I LTR MaLR 5 208 -201 701 187 0 7 chr5 71832445 71832600 -127797550 + (TG)n Simple_repeat Simple_repeat 1 154 0 464 252 41 8 chr5 71832624 71832747 -127797403 + MLT1I LTR MaLR 244 370 -39 264 161 196 0 chr5 71832761 71832817 -127797333 + MLT1I LTR MaLR 335 401 -8 762 148 169 0 chr5 71832986 71833128 -127797022 + AluSg/x SINE Alu 137 302 -10 2308 67 49 0 chr5 71833174 71833459 -127796691 - AluSx SINE Alu -12 300 2 307 253 32 136 chr5 71833681 71833902 -127796248 - L1MEc LINE L1 -4151 2245 2048 2434 71 3 0 chr5 71833940 71834235 -127795915 - AluY SINE Alu -15 296 1 1111 202 38 35 chr5 71835816 71836021 -127794129 - L1ME LINE L1 -634 5532 5329 1715 186 16 7 chr5 71836021 71836328 -127793822 - AluJo SINE Alu -2 310 1 1111 202 38 35 chr5 71836328 71836532 -127793618 - L1ME LINE L1 -837 5329 5122 2123 214 97 83 chr5 71836546 71837308 -127792842 + LTR19C LTR ERV1 7 779 0 1100 225 89 26 chr5 71837329 71837664 -127792486 - L1ME LINE L1 -1068 5078 4709 3996 92 38 36 chr5 71837664 71838273 -127791877 + MER4B LTR ERV1 1 610 0 1100 225 89 26 chr5 71838273 71838364 -127791786 - L1ME LINE L1 -1437 4709 4625 345 277 110 5 chr5 71838379 71838421 -127791729 - HAL1b LINE L1 -618 730 694 2478 81 3 3 chr5 71838421 71838730 -127791420 - AluSq SINE Alu -4 309 1 345 277 110 5 chr5 71838730 71838927 -127791223 - HAL1b LINE L1 -654 694 466 564 152 50 0 chr5 71839461 71839560 -127790590 - AluSg/x SINE Alu -2 308 205 1949 122 20 31 chr5 71839480 71839774 -127790376 - AluSx SINE Alu -21 291 1 202 204 93 0 chr5 71839894 71839948 -127790202 + MIR SINE MIR 84 142 -120 1283 145 9 33 chr5 71839967 71840181 -127789969 - AluJb SINE Alu -19 293 85 2292 117 0 0 chr5 71840277 71840584 -127789566 + AluSx SINE Alu 3 309 -3 247 286 33 0 chr5 71840594 71840685 -127789465 + HAL1 LINE L1 1908 2001 -506 27 29 0 0 chr5 71840694 71840728 -127789422 + AT_rich Low_complexity Low_complexity 1 34 0 2411 65 3 26 chr5 71840788 71841097 -127789053 + AluY SINE Alu 1 302 -9 232 156 195 39 chr5 71841104 71841181 -127788969 + L1MB5 LINE L1 5463 5551 -629 * 774 203 10 47 chr5 71841172 71841364 -127788786 + L1MB5 LINE L1 5903 6087 -87 2849 183 18 48 chr5 71841364 71841444 -127788706 + L1MB5 LINE L1 5532 5613 -561 2122 114 30 3 chr5 71841444 71841741 -127788409 + AluSx SINE Alu 1 305 -7 2849 183 18 48 chr5 71841741 71842286 -127787864 + L1MB5 LINE L1 5613 6140 -34 1741 175 7 13 chr5 71842286 71842595 -127787555 + AluJo SINE Alu 2 308 -4 2849 183 18 48 chr5 71842595 71842620 -127787530 + L1MB5 LINE L1 6140 6164 -10 486 295 27 42 chr5 71842624 71842885 -127787265 + HAL1 LINE L1 2012 2268 -239 1211 111 0 23 chr5 71843486 71843658 -127786492 - AluSg/x SINE Alu -6 304 137 434 194 82 20 chr5 71843658 71843756 -127786394 + AluSg/x SINE Alu 197 300 -12 245 184 0 20 chr5 71844092 71844141 -127786009 - AluSg/x SINE Alu -169 133 86 1151 143 5 35 chr5 71844141 71844344 -127785806 - AluJo SINE Alu -92 220 24 948 191 77 0 chr5 71845003 71845068 -127785082 - MER3 DNA MER1_type 0 209 150 2459 66 0 7 chr5 71845068 71845372 -127784778 + AluY SINE Alu 1 302 -9 948 191 77 0 chr5 71845372 71845500 -127784650 - MER3 DNA MER1_type -59 150 1 1603 209 13 61 chr5 71845520 71845588 -127784562 - MLT1A2 LTR MaLR 0 374 304 2003 152 30 0 chr5 71845588 71845891 -127784259 + AluSx SINE Alu 1 312 0 1603 209 13 61 chr5 71845891 71846170 -127783980 - MLT1A2 LTR MaLR -70 304 46 2442 68 3 13 chr5 71846170 71846477 -127783673 - AluY SINE Alu -7 304 1 1603 209 13 61 chr5 71846477 71846521 -127783629 - MLT1A2 LTR MaLR -328 46 1 23 33 0 0 chr5 71846752 71846782 -127783368 + AT_rich Low_complexity Low_complexity 1 30 0 1266 127 91 0 chr5 71846798 71847019 -127783131 - L1MA6 LINE L1 -4 6296 6056 1719 157 80 0 chr5 71847019 71847319 -127782831 - MER2 DNA MER2_type -21 324 1 279 231 115 19 chr5 71847325 71847429 -127782721 - L2 LINE L2 -96 3217 3104 21 0 0 0 chr5 71847865 71847886 -127782264 + AT_rich Low_complexity Low_complexity 1 21 0 623 154 0 0 chr5 71850325 71850429 -127779721 + AluSp/q SINE Alu 210 313 0 703 192 15 0 chr5 71850429 71850559 -127779591 + AluJ SINE Alu 1 132 -170 1264 128 49 5 chr5 71850568 71850771 -127779379 - THE1B LTR MaLR -150 214 3 7879 113 74 11 chr5 71850778 71851968 -127778182 - THE1B-int LTR MaLR -6 1574 310 1083 163 11 0 chr5 71851978 71852156 -127777994 + AluJ SINE Alu 129 308 -4 918 134 14 7 chr5 71852194 71852336 -127777814 + BC200 scRNA scRNA 1 143 -57 1595 206 3 3 chr5 71852448 71852740 -127777410 - AluJo SINE Alu -17 295 4 2654 61 3 0 chr5 71852863 71853173 -127776977 + AluSp SINE Alu 2 312 -1 1163 275 59 21 chr5 71853201 71853677 -127776473 + L1ME3A LINE L1 5458 5951 -219 2105 118 13 7 chr5 71853821 71854125 -127776025 - AluSx SINE Alu -6 306 1 1840 138 3 43 chr5 71854303 71854607 -127775543 + AluJo SINE Alu 1 292 -20 2350 86 0 7 chr5 71854614 71854917 -127775233 + AluSx SINE Alu 1 301 -11 1124 237 87 70 chr5 71855351 71855879 -127774271 + HAL1 LINE L1 1398 1934 -573 2208 129 0 3 chr5 71855897 71856199 -127773951 + AluSx SINE Alu 1 301 -11 232 156 195 39 chr5 71856206 71856283 -127773867 + L1MB5 LINE L1 5463 5551 -629 * 873 197 10 40 chr5 71856274 71856472 -127773678 + L1MB5 LINE L1 5903 6094 -80 2861 184 19 43 chr5 71856472 71856545 -127773605 + L1MB5 LINE L1 5535 5608 -566 2162 111 30 3 chr5 71856545 71856843 -127773307 + AluSx SINE Alu 1 306 -6 2861 184 19 43 chr5 71856843 71857388 -127772762 + L1MB5 LINE L1 5608 6140 -34 1747 175 7 10 chr5 71857388 71857696 -127772454 + AluJo SINE Alu 2 308 -4 2861 184 19 43 chr5 71857696 71857721 -127772429 + L1MB5 LINE L1 6140 6164 -10 486 295 27 42 chr5 71857725 71857986 -127772164 + HAL1 LINE L1 2012 2268 -239 2317 106 0 0 chr5 71858519 71858820 -127771330 + AluSq SINE Alu 1 301 -12 348 224 84 9 chr5 71858820 71858927 -127771223 + L2 LINE L2 3199 3313 0 705 201 27 134 chr5 71859762 71859923 -127770227 + MLT1J LTR MaLR 1 134 -377 2338 87 0 3 chr5 71859923 71860252 -127769898 - AluSq SINE Alu 0 328 1 705 201 27 134 chr5 71860252 71860313 -127769837 + MLT1J LTR MaLR 134 200 -311 922 175 62 0 chr5 71860504 71860664 -127769486 + AluJb SINE Alu 137 306 -6 1892 115 61 17 chr5 71860690 71860985 -127769165 + AluY SINE Alu 1 308 -3 1872 90 34 93 chr5 71861580 71861793 -127768357 - AluSx SINE Alu -9 303 114 2469 76 0 25 chr5 71861793 71862109 -127768041 - AluY SINE Alu -3 308 1 1872 90 34 93 chr5 71862109 71862217 -127767933 - AluSx SINE Alu -198 114 1 327 49 0 0 chr5 71862383 71862424 -127767726 + (CA)n Simple_repeat Simple_repeat 2 42 0 225 157 14 86 chr5 71862604 71862674 -127767476 + MLT1K LTR MaLR 44 108 -480 328 227 0 13 chr5 71862687 71862762 -127767388 + MLT1K LTR MaLR 487 560 -28 26 0 0 0 chr5 71863247 71863273 -127766877 + AT_rich Low_complexity Low_complexity 1 26 0 1465 147 0 4 chr5 71863661 71863892 -127766258 + AluJb SINE Alu 71 300 -12 2409 92 0 0 chr5 71863963 71864266 -127765884 + AluSg SINE Alu 1 303 -7 2192 133 0 0 chr5 71864395 71864703 -127765447 + AluSx SINE Alu 1 308 -4 217 139 76 13 chr5 71865758 71865837 -127764313 + CT-rich Low_complexity Low_complexity 2 85 0 557 212 0 8 chr5 71865844 71865962 -127764188 - AluJb SINE Alu -195 117 1 246 296 19 46 chr5 71866398 71866506 -127763644 + MER91C DNA MER1_type 36 140 0 223 245 31 20 chr5 71866723 71866821 -127763329 + CT-rich Low_complexity Low_complexity 1 99 0 1578 101 5 0 chr5 71867101 71867308 -127762842 - AluSx SINE Alu -16 296 89 201 118 59 0 chr5 71867310 71867361 -127762789 + GA-rich Low_complexity Low_complexity 3 56 0 569 127 0 0 chr5 71867375 71867454 -127762696 - AluSx SINE Alu -233 80 2 2282 102 0 10 chr5 71867455 71867760 -127762390 - AluSx SINE Alu -10 302 1 2032 132 13 3 chr5 71867913 71868216 -127761934 + AluSx SINE Alu 1 306 -6 666 270 10 29 chr5 71868219 71868423 -127761727 + L1MC5 LINE L1 7311 7510 -451 1852 147 0 82 chr5 71868432 71868772 -127761378 + AluJb SINE Alu 1 312 0 1499 175 20 4 chr5 71868783 71869029 -127761121 + AluJb SINE Alu 1 250 -62 1214 103 0 103 chr5 71869165 71869359 -127760791 + AluSx SINE Alu 4 177 -135 1941 120 56 11 chr5 71869359 71869643 -127760507 + AluSg SINE Alu 1 297 -13 1553 158 0 55 chr5 71869643 71869690 -127760460 - L1MB8 LINE L1 -22 6156 6108 1587 162 13 52 chr5 71869690 71869998 -127760152 + AluJo SINE Alu 5 300 -12 1553 158 0 55 chr5 71869998 71870261 -127759889 - L1MB8 LINE L1 -70 6108 5863 878 138 27 98 chr5 71870316 71870526 -127759624 - L1MB8 LINE L1 -324 5860 5665 1575 139 65 81 chr5 71870526 71870835 -127759315 - AluJb SINE Alu -8 304 1 878 138 27 98 chr5 71870835 71870849 -127759301 - L1MB8 LINE L1 -519 5665 5652 732 130 0 0 chr5 71871142 71871242 -127758908 + AluJ/FLAM SINE Alu 3 102 -210 2280 95 0 3 chr5 71871242 71871526 -127758624 - AluSx SINE Alu -29 283 1 894 177 0 66 chr5 71871527 71871708 -127758442 - FRAM SINE Alu -7 169 1 285 367 23 34 chr5 71871843 71872020 -127758130 - HUERS-P3 LTR ERV1 -3217 974 800 2070 116 23 10 chr5 71872766 71873068 -127757082 + AluSx SINE Alu 1 306 -6 1875 141 3 30 chr5 71873073 71873378 -127756772 + AluJb SINE Alu 1 297 -15 607 188 128 0 chr5 71873756 71873873 -127756277 + FLAM_A SINE Alu 1 132 -1 180 250 0 0 chr5 71874107 71874147 -127756003 + MIR3 SINE MIR 160 199 -9 213 258 15 15 chr5 71874184 71874250 -127755900 - MIR SINE MIR -195 67 2 980 196 0 0 chr5 71874608 71874776 -127755374 - FRAM SINE Alu -8 168 1 658 276 145 21 chr5 71874880 71875105 -127755045 - HAL1 LINE L1 -1114 1393 1197 1745 143 7 18 chr5 71875105 71875385 -127754765 - AluJb SINE Alu -35 277 1 658 276 145 21 chr5 71875385 71875689 -127754461 - HAL1 LINE L1 -1310 1197 798 1795 177 10 0 chr5 71875826 71876126 -127754024 - AluJb SINE Alu -9 303 1 869 233 68 38 chr5 71876791 71877057 -127753093 - MER21B LTR ERV1 -58 805 532 1306 167 25 8 chr5 71877072 71877317 -127752833 - LTR9 LTR ERV1 -80 532 284 3085 171 23 28 chr5 71877317 71878038 -127752112 - HUERS-P3 LTR ERV1 -6749 692 3 764 141 47 47 chr5 71878040 71878210 -127751940 - LTR9 LTR ERV1 0 612 443 1771 241 75 35 chr5 71878216 71878723 -127751427 - MER21B LTR ERV1 -318 545 19 467 191 22 11 chr5 71878745 71878834 -127751316 - MER21B LTR ERV1 -773 90 1 485 220 45 15 chr5 71878842 71878974 -127751176 - MIR SINE MIR -24 238 103 2280 102 0 0 chr5 71879036 71879331 -127750819 - AluSc SINE Alu -14 295 1 485 302 19 28 chr5 71879909 71880124 -127750026 - L1M4 LINE L1 -1968 4178 3966 1117 224 43 18 chr5 71880281 71880331 -127749819 - L1M4 LINE L1 -758 5388 5341 2475 74 0 7 chr5 71880331 71880630 -127749520 - AluSg SINE Alu -13 297 1 1117 224 43 18 chr5 71880630 71880905 -127749245 - L1M4 LINE L1 -805 5341 5055 2138 207 86 44 chr5 71880926 71881579 -127748571 + L1ME1 LINE L1 5483 6162 -4 2674 32 0 19 chr5 71881650 71881962 -127748188 + AluY SINE Alu 1 306 -5 477 215 62 6 chr5 71882516 71882693 -127747457 - L1P LINE L1 -1397 4749 4563 3042 76 11 11 chr5 71882693 71883128 -127747022 + L1PA3 LINE L1 5721 6155 0 24 0 0 0 chr5 71883695 71883719 -127746431 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr5 71884398 71884426 -127745724 + AT_rich Low_complexity Low_complexity 1 28 0 639 168 40 0 chr5 71885086 71885211 -127744939 - L1PA13 LINE L1 -1 6162 6033 709 249 24 24 chr5 71885401 71885606 -127744544 - MER20 DNA MER1_type -7 212 8 574 213 7 77 chr5 71885965 71886120 -127744030 + MER20 DNA MER1_type 24 167 -52 2338 60 3 13 chr5 71886433 71886731 -127743419 + AluY SINE Alu 1 295 -16 586 211 34 46 chr5 71888061 71888236 -127741914 - MER104 DNA Tc2 -1 179 7 3213 224 75 23 chr5 71888300 71888790 -127741360 - L1MC3 LINE L1 -666 7119 6656 1896 172 123 5 chr5 71888790 71889173 -127740977 - MSTA LTR MaLR 0 428 1 3213 224 75 23 chr5 71889173 71889607 -127740543 - L1MC3 LINE L1 -1129 6656 6147 2610 191 47 2 chr5 71889759 71890287 -127739863 - L1PB4 LINE L1 -1 6857 6306 1726 220 14 68 chr5 71890287 71890803 -127739347 - L1PB4 LINE L1 -3456 3392 2949 2196 129 0 0 chr5 71890803 71891106 -127739044 - AluSg SINE Alu -7 303 1 1726 220 14 68 chr5 71891106 71891507 -127738643 - L1PB4 LINE L1 -3899 2949 2528 309 273 0 0 chr5 71891585 71891673 -127738477 - MIR SINE MIR -75 187 100 30 0 0 0 chr5 71892010 71892040 -127738110 + AT_rich Low_complexity Low_complexity 1 30 0 268 302 94 9 chr5 71893323 71893429 -127736721 - L2 LINE L2 0 3272 3158 21 0 0 0 chr5 71893824 71893845 -127736305 + AT_rich Low_complexity Low_complexity 1 21 0 387 374 47 19 chr5 71894214 71894535 -127735615 - L2 LINE L2 -1007 2307 1978 458 287 20 7 chr5 71895759 71895909 -127734241 + MLT1F LTR MaLR 16 167 -400 1216 176 29 98 chr5 71896117 71896231 -127733919 + MLT1A1 LTR MaLR 43 163 -202 2129 127 0 25 chr5 71896231 71896546 -127733604 - AluSg SINE Alu -3 307 1 1216 176 29 98 chr5 71896546 71896778 -127733372 + MLT1A1 LTR MaLR 163 365 0 591 224 44 44 chr5 71896778 71896961 -127733189 + MLT1F LTR MaLR 333 515 -27 928 191 77 0 chr5 71897475 71897540 -127732610 - MER3 DNA MER1_type 0 209 150 2383 69 0 7 chr5 71897540 71897844 -127732306 + AluY SINE Alu 1 302 -9 928 191 77 0 chr5 71897844 71897972 -127732178 - MER3 DNA MER1_type -59 150 1 1546 209 13 61 chr5 71897993 71898061 -127732089 - MLT1A2 LTR MaLR 0 374 304 2029 148 30 0 chr5 71898061 71898364 -127731786 + AluSx SINE Alu 1 312 0 1546 209 13 61 chr5 71898364 71898643 -127731507 - MLT1A2 LTR MaLR -70 304 46 2476 64 3 13 chr5 71898643 71898955 -127731195 - AluY SINE Alu -2 309 1 1546 209 13 61 chr5 71898955 71898999 -127731151 - MLT1A2 LTR MaLR -328 46 1 23 33 0 0 chr5 71899230 71899260 -127730890 + AT_rich Low_complexity Low_complexity 1 30 0 1210 127 91 0 chr5 71899276 71899497 -127730653 - L1MA6 LINE L1 -4 6296 6056 1578 157 80 0 chr5 71899497 71899797 -127730353 - MER2 DNA MER2_type -21 324 1 306 231 115 19 chr5 71899803 71899907 -127730243 - L2 LINE L2 -96 3217 3104 610 147 0 0 chr5 71905249 71905351 -127724799 + AluSp/q SINE Alu 210 311 -2 698 192 15 0 chr5 71905353 71905483 -127724667 + FLAM_C SINE Alu 1 132 -1 1165 128 49 5 chr5 71905492 71905695 -127724455 - THE1B LTR MaLR -150 214 3 1900 98 49 0 chr5 71905702 71906007 -127724143 - THE1B-int LTR MaLR -6 1574 1255 28 29 0 0 chr5 71906173 71906208 -127723942 + AT_rich Low_complexity Low_complexity 1 35 0 1487 118 0 59 chr5 71906359 71906647 -127723503 - AluSx SINE Alu -30 282 12 850 211 61 91 chr5 71906742 71907149 -127723001 - HAL1 LINE L1 -676 1831 1437 2287 89 0 7 chr5 71907610 71907913 -127722237 - AluSx SINE Alu -11 301 1 1840 138 3 43 chr5 71907920 71908224 -127721926 - AluJo SINE Alu -20 292 1 2086 117 16 10 chr5 71908402 71908709 -127721441 + AluSx SINE Alu 1 309 -3 994 270 53 18 chr5 71908853 71909249 -127720901 - L1ME3A LINE L1 -219 5951 5542 1471 68 34 53 chr5 71909350 71909556 -127720594 - AluSp SINE Alu -2 311 110 2405 74 0 29 chr5 71909572 71909884 -127720266 - AluY SINE Alu -8 303 1 633 121 0 0 chr5 71909900 71909991 -127720159 - AluS SINE Alu -222 91 1 399 41 0 0 chr5 71910157 71910206 -127719944 + (CA)n Simple_repeat Simple_repeat 2 50 0 301 227 0 13 chr5 71910469 71910544 -127719606 + MLT1K LTR MaLR 487 560 -28 26 0 0 0 chr5 71911029 71911055 -127719095 + AT_rich Low_complexity Low_complexity 1 26 0 2049 125 29 24 chr5 71911465 71911841 -127718309 + THE1C-int LTR MaLR 1203 1580 0 2031 174 11 21 chr5 71911841 71912220 -127717930 + THE1C LTR MaLR 1 375 0 4426 166 43 20 chr5 71912220 71912337 -127717813 + Tigger3b DNA MER2_type 225 338 -2690 2157 55 0 0 chr5 71912337 71912592 -127717558 + AluY SINE Alu 47 301 -10 4426 166 43 20 chr5 71912592 71913453 -127716697 + Tigger3b DNA MER2_type 338 1225 -6 592 191 62 5 chr5 71913464 71913674 -127716476 + L1MDa LINE L1 2385 2606 -3934 23 0 0 0 chr5 71913731 71913754 -127716396 + AT_rich Low_complexity Low_complexity 1 23 0 2210 94 0 7 chr5 71913871 71914193 -127715957 - AluY SINE Alu 0 311 1 225 0 0 0 chr5 71914351 71914376 -127715774 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1517 125 93 89 chr5 71914378 71914658 -127715492 - AluSx SINE Alu -31 281 1 204 316 120 15 chr5 71915099 71915232 -127714918 + MIR SINE MIR 13 159 -103 2426 207 69 54 chr5 71915841 71916599 -127713551 + MER4E LTR ERV1 1 769 -10 186 373 85 34 chr5 71918189 71918366 -127711784 - MIR SINE MIR -17 245 60 29 70 0 0 chr5 71918389 71918446 -127711704 + AT_rich Low_complexity Low_complexity 1 57 0 577 312 162 41 chr5 71918910 71919423 -127710727 + L1MEd LINE L1 523 1097 -5022 28 0 0 0 chr5 71919828 71919856 -127710294 + AT_rich Low_complexity Low_complexity 1 28 0 6259 175 11 14 chr5 71920029 71921045 -127709105 - L1PA14 LINE L1 0 6161 5143 2115 122 35 27 chr5 71921045 71921414 -127708736 + THE1C LTR MaLR 1 372 -3 6259 175 11 14 chr5 71921414 71922473 -127707677 - L1PA14 LINE L1 -1018 5143 4088 2709 193 20 16 chr5 71922473 71922744 -127707406 + L1P LINE L1 2121 2390 -3756 2267 90 0 39 chr5 71922744 71923056 -127707094 + AluSc SINE Alu 1 300 -9 2709 193 20 16 chr5 71923056 71923394 -127706756 + L1P LINE L1 2390 2732 -3414 243 88 0 0 chr5 71923810 71923844 -127706306 + (CA)n Simple_repeat Simple_repeat 2 35 0 273 278 43 0 chr5 71923901 71924022 -127706128 - L1ME2 LINE L1 -14 6148 6023 788 249 47 22 chr5 71924025 71924387 -127705763 - L1MEc LINE L1 -3373 3009 2639 251 293 50 46 chr5 71924416 71924579 -127705571 - L1MEc LINE L1 -3959 2604 2438 1402 209 33 50 chr5 71924579 71924976 -127705174 + MLT1B LTR MaLR 1 390 0 251 293 50 46 chr5 71924976 71925071 -127705079 - L1MEc LINE L1 -4125 2438 2345 559 324 70 24 chr5 71925204 71925574 -127704576 - L1MEc LINE L1 -4999 1385 999 310 298 18 18 chr5 71925599 71925713 -127704437 - L1MEc LINE L1 -5477 1086 973 239 70 0 23 chr5 71926200 71926243 -127703907 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 685 225 0 12 chr5 71926245 71926405 -127703745 - L1PA16 LINE L1 -10 6156 5999 411 141 26 0 chr5 71926410 71926488 -127703662 + L1P LINE L1 5141 5220 -926 22 35 0 0 chr5 71927668 71927697 -127702453 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 71928701 71928722 -127701428 + AT_rich Low_complexity Low_complexity 1 21 0 225 191 0 0 chr5 71929247 71929294 -127700856 + T-rich Low_complexity Low_complexity 1 47 0 853 224 128 0 chr5 71929401 71929597 -127700553 - MER58A DNA MER1_type -3 221 1 343 235 50 67 chr5 71929604 71929723 -127700427 + L2 LINE L2 3188 3304 -9 333 303 97 32 chr5 71931341 71931526 -127698624 - MIR SINE MIR -13 249 53 330 318 72 70 chr5 71931631 71931865 -127698285 + MLT1F-int LTR MaLR 961 1198 -173 2812 98 2 10 chr5 71931865 71932274 -127697876 + L1PA10 LINE L1 5763 6168 0 330 318 72 70 chr5 71932274 71932442 -127697708 + MLT1F-int LTR MaLR 1198 1364 -7 462 249 167 52 chr5 71932450 71932889 -127697261 + MLT1F LTR MaLR 2 567 0 1262 273 37 11 chr5 71932891 71933356 -127696794 + L1MC4 LINE L1 7355 7831 -211 2089 155 0 0 chr5 71933677 71933981 -127696169 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr5 71935990 71936011 -127694139 + AT_rich Low_complexity Low_complexity 1 21 0 1296 188 28 74 chr5 71936013 71936337 -127693813 + AluJo SINE Alu 1 309 -3 23 0 0 0 chr5 71937428 71937451 -127692699 + AT_rich Low_complexity Low_complexity 1 23 0 204 200 0 0 chr5 71938498 71938543 -127691607 + GA-rich Low_complexity Low_complexity 2 46 0 219 204 59 26 chr5 71939524 71939676 -127690474 + (TA)n Simple_repeat Simple_repeat 2 158 0 25 0 0 0 chr5 71939938 71939963 -127690187 + AT_rich Low_complexity Low_complexity 1 25 0 2078 122 0 3 chr5 71941217 71941513 -127688637 - AluSq SINE Alu -18 295 1 214 296 0 17 chr5 71941540 71941655 -127688495 + (TA)n Simple_repeat Simple_repeat 2 114 0 237 231 19 0 chr5 71941792 71941844 -127688306 + (TG)n Simple_repeat Simple_repeat 2 54 0 398 68 0 17 chr5 71942893 71942952 -127687198 + (TA)n Simple_repeat Simple_repeat 2 59 0 1509 173 58 18 chr5 71944437 71944714 -127685436 - AluJb SINE Alu -14 298 11 1461 248 82 24 chr5 71944747 71945198 -127684952 + MLT2B1 LTR ERVL 3 479 -41 398 201 0 7 chr5 71945201 71945355 -127684795 + (TA)n Simple_repeat Simple_repeat 1 153 0 377 284 64 26 chr5 71945783 71946047 -127684103 - HAL1 LINE L1 -698 1809 1536 225 348 14 22 chr5 71946283 71946421 -127683729 - HAL1 LINE L1 -1120 1387 1251 233 333 85 33 chr5 71946758 71946911 -127683239 - HAL1 LINE L1 -1580 927 767 249 327 126 5 chr5 71947500 71947699 -127682451 - L1MC4 LINE L1 -27 8015 7793 214 306 10 0 chr5 71949838 71949936 -127680214 + T-rich Low_complexity Low_complexity 4 102 0 2117 98 17 7 chr5 71950974 71951270 -127678880 + AluY SINE Alu 2 300 -11 239 302 0 0 chr5 71951838 71951901 -127678249 + GA-rich Low_complexity Low_complexity 3 65 0 362 319 25 19 chr5 71953082 71953239 -127676911 + MIR SINE MIR 17 174 -88 542 275 43 33 chr5 71953400 71953611 -127676539 - MIR SINE MIR -16 246 34 431 135 53 0 chr5 71954218 71954351 -127675799 + (TA)n Simple_repeat Simple_repeat 2 141 0 21 36 0 0 chr5 71954708 71954736 -127675414 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr5 71955143 71955164 -127674986 + (T)n Simple_repeat Simple_repeat 1 21 0 23 0 0 0 chr5 71955267 71955290 -127674860 + AT_rich Low_complexity Low_complexity 1 23 0 1583 160 65 49 chr5 71955588 71955957 -127674193 - THE1C LTR MaLR 0 375 1 1381 255 91 32 chr5 71956175 71956638 -127673512 + MLT1E2 LTR MaLR 137 626 0 1788 105 223 169 chr5 71957481 71958066 -127672084 + LTR12 LTR ERV1 1 2348 -90 186 43 0 0 chr5 71958892 71958915 -127671235 + (T)n Simple_repeat Simple_repeat 1 23 0 572 344 16 6 chr5 71959190 71959373 -127670777 - MIR3 SINE MIR -4 204 20 220 361 21 10 chr5 71959892 71959989 -127670161 - MIR SINE MIR -73 135 38 21 0 0 0 chr5 71961117 71961138 -127669012 + AT_rich Low_complexity Low_complexity 1 21 0 256 253 343 6 chr5 71962570 71962736 -127667414 + MIR SINE MIR 1 222 -40 754 184 0 27 chr5 71962893 71963040 -127667110 - FLAM_C SINE Alu 0 143 1 203 255 0 0 chr5 71963760 71963811 -127666339 - MIR SINE MIR -121 141 91 1298 124 38 0 chr5 71964282 71964491 -127665659 - L1PA15 LINE L1 -7 6158 5942 261 331 96 46 chr5 71964534 71964794 -127665356 + MLT1J LTR MaLR 232 504 -7 23 0 0 0 chr5 71965942 71965965 -127664185 + AT_rich Low_complexity Low_complexity 1 23 0 386 248 162 10 chr5 71967146 71967396 -127662754 + L2 LINE L2 2749 3030 -283 2240 166 19 87 chr5 71967446 71967826 -127662324 - L1PA16 LINE L1 -32 6134 5800 2099 114 0 7 chr5 71967826 71968116 -127662034 - AluSx SINE Alu -24 288 1 2240 166 19 87 chr5 71968116 71968276 -127661874 - L1PA16 LINE L1 -366 5800 5631 333 274 75 27 chr5 71968407 71968553 -127661597 + L2 LINE L2 3161 3313 0 267 294 129 22 chr5 71968687 71968959 -127661191 + L2 LINE L2 1862 2162 -1152 679 191 0 30 chr5 71968962 71969093 -127661057 - FLAM_C SINE Alu -16 127 1 197 107 0 0 chr5 71969336 71969364 -127660786 + L2 LINE L2 518 545 -2769 380 311 89 21 chr5 71969408 71969643 -127660507 + MIR SINE MIR 12 262 0 21 0 0 0 chr5 71969783 71969804 -127660346 + AT_rich Low_complexity Low_complexity 1 21 0 1293 134 21 21 chr5 71970005 71970244 -127659906 + L1MA8 LINE L1 6050 6288 -3 192 228 53 35 chr5 71970803 71970860 -127659290 + L2 LINE L2 3187 3244 -69 2333 96 3 0 chr5 71971006 71971309 -127658841 - AluSx SINE Alu -8 304 1 502 274 51 23 chr5 71971363 71971578 -127658572 - L1MEd LINE L1 -5338 781 561 761 331 92 11 chr5 71971913 71972282 -127657868 + LTR16B LTR ERVL 36 434 -30 28 48 0 0 chr5 71972406 71972448 -127657702 + AT_rich Low_complexity Low_complexity 1 42 0 1693 132 0 0 chr5 71972479 71972714 -127657436 + AluSq SINE Alu 1 235 -78 350 89 0 18 chr5 71972725 71972781 -127657369 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 25 0 0 0 chr5 71974701 71974726 -127655424 + AT_rich Low_complexity Low_complexity 1 25 0 21 95 0 0 chr5 71974822 71974885 -127655265 + AT_rich Low_complexity Low_complexity 1 63 0 443 301 79 30 chr5 71975434 71975637 -127654513 + MIR SINE MIR 5 217 -45 2023 145 19 29 chr5 71975837 71976216 -127653934 - THE1C LTR MaLR 0 375 1 1971 133 0 24 chr5 71976709 71977003 -127653147 + AluSx SINE Alu 1 287 -25 213 258 50 8 chr5 71977155 71977275 -127652875 + (TA)n Simple_repeat Simple_repeat 1 125 0 187 260 60 0 chr5 71978908 71978958 -127651192 + MIR SINE MIR 132 184 -78 1727 184 13 7 chr5 71979570 71979879 -127650271 + AluJo SINE Alu 1 311 -1 1934 130 7 7 chr5 71980071 71980383 -127649767 + AluSx SINE Alu 1 312 0 227 274 167 0 chr5 71980384 71980468 -127649682 - L2 LINE L2 -5 3308 3211 353 218 58 11 chr5 71980805 71980892 -127649258 - MER5B DNA MER1_type -1 177 87 334 107 0 67 chr5 71980892 71980967 -127649183 - L1MA4 LINE L1 0 6300 6231 1033 123 0 0 chr5 71980976 71981122 -127649028 + AluSg/x SINE Alu 158 303 -7 1977 107 3 42 chr5 71981124 71981270 -127648880 + AluSp SINE Alu 1 132 -181 2445 44 3 0 chr5 71981270 71981563 -127648587 + AluY SINE Alu 1 294 -17 1977 107 3 42 chr5 71981563 71981705 -127648445 + AluSp SINE Alu 132 278 -35 2173 57 50 0 chr5 71981705 71981984 -127648166 + AluY SINE Alu 1 293 -18 421 118 15 0 chr5 71981989 71982057 -127648093 - L1MA4 LINE L1 -64 6236 6168 219 185 261 15 chr5 71982059 71982124 -127648026 - MER5B DNA MER1_type -76 102 22 2173 113 0 0 chr5 71982136 71982427 -127647723 - AluSx SINE Alu -15 297 7 1273 67 0 0 chr5 71982461 71982625 -127647525 - L1PA6 LINE L1 0 6154 5991 281 135 19 39 chr5 71982647 71982699 -127647451 - MER5B DNA MER1_type -127 51 1 1781 183 0 7 chr5 71982745 71983045 -127647105 - AluJb SINE Alu -14 298 1 304 338 106 0 chr5 71983221 71983372 -127646778 - MIR SINE MIR -43 219 53 397 123 15 0 chr5 71983445 71983510 -127646640 - MER41A LTR ERV1 -89 465 400 2121 100 11 0 chr5 71983542 71983844 -127646306 - AluSp SINE Alu 0 310 6 267 105 0 0 chr5 71983910 71983948 -127646202 + L1M4 LINE L1 5566 5603 -571 2152 120 0 3 chr5 71983951 71984252 -127645898 + AluSx SINE Alu 1 300 -12 2165 107 14 0 chr5 71984472 71984762 -127645388 + AluSg SINE Alu 1 294 -16 2029 108 6 60 chr5 71985827 71986141 -127644009 + AluSx SINE Alu 1 297 -15 2155 112 0 0 chr5 71986663 71986959 -127643191 - AluSx SINE Alu -16 296 1 1921 118 13 30 chr5 71987412 71987716 -127642434 - AluJb SINE Alu -13 299 1 21 0 0 0 chr5 71987738 71987759 -127642391 + AT_rich Low_complexity Low_complexity 1 21 0 2210 115 0 19 chr5 71988029 71988341 -127641809 - AluSx SINE Alu -2 310 5 2199 75 36 0 chr5 71988361 71988668 -127641482 - AluSp SINE Alu 0 317 1 616 125 0 0 chr5 71988964 71989052 -127641098 - AluSg/x SINE Alu -16 296 209 613 157 19 9 chr5 71989044 71989152 -127640998 - AluSq SINE Alu -160 153 45 * 1825 168 0 3 chr5 71989301 71989587 -127640563 + AluJb SINE Alu 1 286 -26 339 25 0 0 chr5 71989587 71989627 -127640523 + (CA)n Simple_repeat Simple_repeat 2 41 0 * 369 0 0 0 chr5 71989626 71989667 -127640483 + (TC)n Simple_repeat Simple_repeat 1 41 0 1825 168 0 3 chr5 71989627 71989672 -127640478 + AluJb SINE Alu 286 291 -21 1830 176 0 0 chr5 71990088 71990372 -127639778 + AluJb SINE Alu 1 284 -28 2186 96 4 0 chr5 71990392 71990673 -127639477 + AluSg SINE Alu 21 302 -8 2269 100 3 19 chr5 71990676 71990985 -127639165 + AluSx SINE Alu 1 304 -8 1642 73 51 13 chr5 71991304 71991331 -127638819 - MER75B DNA T2_type -261 243 219 2533 62 0 28 chr5 71991331 71991651 -127638499 + AluY SINE Alu 1 311 0 1642 73 51 13 chr5 71991651 71991857 -127638293 - MER75B DNA T2_type -285 219 1 2956 82 0 3 chr5 71992261 71992637 -127637513 - THE1C LTR MaLR 0 375 1 2189 113 14 0 chr5 71992758 71993049 -127637101 - AluSx SINE Alu -17 295 1 1032 49 0 83 chr5 71993051 71993195 -127636955 - AluSq/x SINE Alu -180 132 1 1039 148 35 6 chr5 71993203 71993372 -127636778 + AluSg/x SINE Alu 123 296 -16 1666 227 50 76 chr5 71993723 71994287 -127635863 - L1ME3A LINE L1 -207 5963 5415 1144 234 101 30 chr5 71994458 71994894 -127635256 - MLT1C LTR MaLR 0 467 1 1172 139 0 0 chr5 71994940 71995105 -127635045 - AluSc SINE Alu -13 296 132 2288 80 0 7 chr5 71995105 71995405 -127634745 - AluSg SINE Alu -12 298 1 1020 119 0 7 chr5 71995440 71995583 -127634567 + AluJb SINE Alu 1 142 -170 2367 85 0 0 chr5 71996267 71996581 -127633569 - AluY SINE Alu 0 314 1 1179 156 0 0 chr5 71996627 71996806 -127633344 + AluSg/x SINE Alu 121 299 -11 397 206 43 49 chr5 71996846 71997023 -127633127 - L1MC/D LINE L1 -329 5792 5615 2217 188 24 26 chr5 71997023 71997155 -127632995 - MER65C LTR ERV1 0 461 330 2345 97 7 0 chr5 71997155 71997454 -127632696 + AluSp SINE Alu 1 301 -12 2217 188 24 26 chr5 71997454 71997783 -127632367 - MER65C LTR ERV1 -131 330 1 397 206 43 49 chr5 71997783 71997820 -127632330 - L1MC/D LINE L1 -506 5615 5579 2224 99 3 16 chr5 71997820 71998124 -127632026 - AluSx SINE Alu -11 301 2 397 206 43 49 chr5 71998124 71998146 -127632004 - L1MC/D LINE L1 -542 5579 5558 794 172 0 15 chr5 71998146 71998280 -127631870 - FLAM_C SINE Alu 0 133 2 397 206 43 49 chr5 71998280 71998396 -127631754 - L1MC/D LINE L1 -563 5558 5433 25 0 0 0 chr5 71998458 71998483 -127631667 + AT_rich Low_complexity Low_complexity 1 25 0 907 130 0 0 chr5 71998483 71998614 -127631536 - FLAM_C SINE Alu 0 133 3 2228 121 7 0 chr5 71998661 71998966 -127631184 - AluSx SINE Alu -5 307 1 295 213 82 16 chr5 71998967 71999094 -127631056 - L1MC/D LINE L1 -892 5452 5314 1414 180 86 7 chr5 71999131 71999409 -127630741 - AluJb SINE Alu -12 300 1 1951 131 40 0 chr5 71999410 71999707 -127630443 - AluSx SINE Alu -2 310 2 414 204 97 19 chr5 71999955 72000058 -127630092 + AluJo SINE Alu 45 155 -157 714 165 0 94 chr5 72000058 72000228 -127629922 + L1MB7 LINE L1 6014 6167 -17 2301 83 37 7 chr5 72000245 72000545 -127629605 + AluSg SINE Alu 1 309 -1 21 36 0 0 chr5 72000553 72000581 -127629569 + AT_rich Low_complexity Low_complexity 1 28 0 442 104 0 0 chr5 72000687 72000754 -127629396 - Alu SINE Alu -2 308 242 21 0 0 0 chr5 72000809 72000830 -127629320 + AT_rich Low_complexity Low_complexity 1 21 0 405 127 164 60 chr5 72000840 72000873 -127629277 - L1MA9 LINE L1 -4 6308 6280 2215 116 0 0 chr5 72000873 72001166 -127628984 - AluSx SINE Alu -19 293 1 405 127 164 60 chr5 72001166 72001266 -127628884 - L1MA9 LINE L1 -32 6280 6161 2400 88 0 0 chr5 72001449 72001744 -127628406 + AluSg SINE Alu 1 295 -15 1811 136 20 10 chr5 72001751 72002045 -127628105 + AluJb SINE Alu 1 297 -15 360 0 0 0 chr5 72002210 72002250 -127627900 + (CA)n Simple_repeat Simple_repeat 2 41 0 1566 123 8 4 chr5 72002251 72002487 -127627663 + AluJb SINE Alu 74 310 -2 433 237 272 39 chr5 72003042 72003325 -127626825 - L2 LINE L2 -623 2691 2343 1010 157 86 10 chr5 72003394 72003592 -127626558 + AluJb SINE Alu 83 295 -17 2494 35 0 7 chr5 72003593 72003914 -127626236 + AluY SINE Alu 1 311 0 619 203 72 0 chr5 72003954 72004092 -127626058 - FRAM SINE Alu -22 154 7 218 211 28 14 chr5 72004093 72004164 -127625986 - L2 LINE L2 -1537 1777 1706 700 164 7 36 chr5 72004192 72004332 -127625818 - FRAM SINE Alu -35 141 6 2448 247 122 45 chr5 72004333 72004928 -127625222 - L2 LINE L2 -1618 1696 1148 2243 115 0 7 chr5 72004928 72005232 -127624918 + AluSx SINE Alu 1 302 -10 2448 247 122 45 chr5 72005232 72005283 -127624867 - L2 LINE L2 -2166 1148 1102 2282 116 6 0 chr5 72005283 72005594 -127624556 + AluSq SINE Alu 1 313 0 1472 152 18 94 chr5 72005597 72005927 -127624223 + AluJb SINE Alu 1 305 -7 2448 247 122 45 chr5 72005927 72006127 -127624023 - L2 LINE L2 -2213 1101 918 2076 144 108 10 chr5 72006127 72006517 -127623633 - MSTA LTR MaLR 0 428 1 2448 247 122 45 chr5 72006517 72006739 -127623411 - L2 LINE L2 -2396 918 539 956 164 16 55 chr5 72006739 72006922 -127623228 - AluJb SINE Alu -10 302 127 628 224 78 106 chr5 72006929 72007000 -127623150 - L2 LINE L2 -2778 536 465 2465 55 0 16 chr5 72007000 72007310 -127622840 - AluY SINE Alu -1 310 6 628 224 78 106 chr5 72007310 72007559 -127622591 - L2 LINE L2 -2849 465 225 559 214 40 35 chr5 72007652 72007825 -127622325 - MLT1F LTR MaLR -15 527 354 583 248 93 23 chr5 72007959 72008256 -127621894 - L1MD2 LINE L1 -343 5821 5680 496 152 11 22 chr5 72008262 72008354 -127621796 + AluJb SINE Alu 46 136 -176 466 253 107 20 chr5 72008355 72008505 -127621645 - L1MD2 LINE L1 -453 5711 5549 356 229 12 0 chr5 72008507 72008590 -127621560 - MER57A LTR ERV1 -25 378 295 1317 201 34 31 chr5 72008591 72008818 -127621332 - L1MD2 LINE L1 -612 5554 5324 1715 186 16 7 chr5 72008818 72009125 -127621025 - AluJo SINE Alu -2 310 1 1317 201 34 31 chr5 72009125 72009329 -127620821 - L1MD2 LINE L1 -842 5324 5122 2123 214 97 83 chr5 72009343 72010105 -127620045 + LTR19C LTR ERV1 7 779 0 1100 225 89 26 chr5 72010126 72010461 -127619689 - L1MD2 LINE L1 -1068 5078 4709 3996 92 38 36 chr5 72010461 72011070 -127619080 + MER4B LTR ERV1 1 610 0 1100 225 89 26 chr5 72011070 72011161 -127618989 - L1MD2 LINE L1 -1437 4709 4625 329 292 121 17 chr5 72011176 72011218 -127618932 - HAL1b LINE L1 -618 730 694 2478 81 3 3 chr5 72011218 72011527 -127618623 - AluSp SINE Alu -4 309 1 329 292 121 17 chr5 72011527 72011724 -127618426 - HAL1b LINE L1 -654 694 466 1949 122 20 31 chr5 72012277 72012571 -127617579 - AluSx SINE Alu -21 291 1 202 204 93 0 chr5 72012691 72012745 -127617405 + MIR SINE MIR 84 142 -120 1283 145 9 33 chr5 72012764 72012978 -127617172 - AluJb SINE Alu -19 293 85 2039 127 0 3 chr5 72013074 72013357 -127616793 + AluSx SINE Alu 3 284 -28 183 42 0 0 chr5 72013360 72013384 -127616766 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1019 221 42 2 chr5 72013587 72013750 -127616400 - L1MB2 LINE L1 -32 6139 5966 2265 74 27 7 chr5 72013750 72014046 -127616104 - AluSp SINE Alu -11 302 1 1019 221 42 2 chr5 72014046 72014138 -127616012 - L1MB2 LINE L1 -205 5966 5879 1661 169 19 41 chr5 72014221 72014407 -127615743 - AluJb SINE Alu 0 312 134 2244 107 3 0 chr5 72014407 72014707 -127615443 - AluSg SINE Alu -9 301 1 1661 169 19 41 chr5 72014707 72014839 -127615311 - AluJb SINE Alu -178 134 1 2209 82 0 0 chr5 72014848 72015161 -127614989 - AluSg SINE Alu 0 328 16 26 0 0 0 chr5 72015398 72015424 -127614726 + AT_rich Low_complexity Low_complexity 1 26 0 913 201 0 0 chr5 72015424 72015593 -127614557 - FRAM SINE Alu -6 170 2 1237 181 5 23 chr5 72015605 72015826 -127614324 + AluJo SINE Alu 3 219 -93 320 194 10 29 chr5 72015828 72015931 -127614219 + GA-rich Low_complexity Low_complexity 4 104 0 26 0 0 0 chr5 72015966 72015992 -127614158 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 72016710 72016738 -127613412 + AT_rich Low_complexity Low_complexity 1 28 0 2182 107 25 0 chr5 72016741 72017022 -127613128 + AluSx SINE Alu 1 288 -24 1926 172 0 0 chr5 72017605 72017902 -127612248 - AluJo SINE Alu -15 297 1 195 110 0 82 chr5 72018093 72018166 -127611984 + (AGTTG)n Simple_repeat Simple_repeat 2 68 0 2239 107 3 3 chr5 72018295 72018595 -127611555 + AluSg SINE Alu 1 300 -10 395 336 53 16 chr5 72019605 72019848 -127610302 - MIR SINE MIR -6 256 3 2317 75 0 4 chr5 72020766 72021077 -127609073 + AluY SINE Alu 2 311 0 2164 101 4 0 chr5 72021393 72021670 -127608480 - AluSx SINE Alu -15 297 20 219 69 0 0 chr5 72022277 72022306 -127607844 + (CCA)n Simple_repeat Simple_repeat 2 30 0 2232 117 10 0 chr5 72022715 72023024 -127607126 - AluSq SINE Alu -1 312 1 261 0 0 0 chr5 72023170 72023199 -127606951 + (TG)n Simple_repeat Simple_repeat 2 30 0 851 138 0 65 chr5 72023404 72023542 -127606608 + FLAM_C SINE Alu 1 129 -4 26 30 0 0 chr5 72023866 72023899 -127606251 + AT_rich Low_complexity Low_complexity 1 33 0 2035 100 0 4 chr5 72024109 72024378 -127605772 - AluY SINE Alu -5 306 39 2307 26 44 7 chr5 72024522 72024827 -127605323 - AluY SINE Alu 0 315 1 2000 144 3 17 chr5 72024998 72025297 -127604853 + AluSx SINE Alu 1 295 -17 1800 145 19 4 chr5 72025297 72025566 -127604584 + AluSx SINE Alu 1 273 -39 21 82 0 0 chr5 72025730 72025779 -127604371 + AT_rich Low_complexity Low_complexity 1 49 0 2224 149 96 31 chr5 72025797 72025863 -127604287 - L1MB8 LINE L1 -1 6177 6117 2409 82 0 10 chr5 72025863 72026169 -127603981 + AluY SINE Alu 1 303 -8 2224 149 96 31 chr5 72026169 72026318 -127603832 - L1MB8 LINE L1 -61 6117 5657 493 282 81 18 chr5 72026318 72026591 -127603559 - L1PB4 LINE L1 -218 5938 5649 2281 98 7 3 chr5 72026591 72026896 -127603254 - AluY SINE Alu -5 306 1 21 0 0 0 chr5 72027275 72027296 -127602854 + AT_rich Low_complexity Low_complexity 1 21 0 2386 64 14 10 chr5 72027385 72027680 -127602470 + AluSp SINE Alu 1 296 -17 2338 93 7 0 chr5 72027734 72028035 -127602115 + AluSp SINE Alu 1 303 -10 26 21 0 42 chr5 72028035 72028055 -127602095 + AT_rich Low_complexity Low_complexity 1 20 -26 1962 115 7 36 chr5 72028055 72028225 -127601925 - AluSp SINE Alu -16 297 138 2400 87 0 3 chr5 72028225 72028536 -127601614 - AluY SINE Alu -1 310 1 1962 115 7 36 chr5 72028536 72028670 -127601480 - AluSp SINE Alu -175 138 2 26 21 0 42 chr5 72028670 72028697 -127601453 + AT_rich Low_complexity Low_complexity 20 46 0 1585 155 0 74 chr5 72028697 72028859 -127601291 - AluJb SINE Alu -18 294 164 2206 121 0 6 chr5 72028859 72029172 -127600978 - AluSx SINE Alu -1 311 1 1585 155 0 74 chr5 72029172 72029318 -127600832 - AluJb SINE Alu -148 164 9 413 268 134 84 chr5 72029992 72030593 -127599557 + L1MC4 LINE L1 7311 8042 0 2086 139 0 0 chr5 72030751 72031054 -127599096 - AluSx SINE Alu -9 303 1 2079 118 14 10 chr5 72031772 72032068 -127598082 - AluSx SINE Alu -15 297 1 2472 86 0 0 chr5 72032168 72032472 -127597678 + AluSx SINE Alu 1 304 -8 1863 159 0 10 chr5 72032494 72032790 -127597360 + AluJb SINE Alu 1 293 -19 787 146 31 15 chr5 72032840 72032970 -127597180 - FLAM_C SINE Alu -1 132 1 2076 114 14 20 chr5 72033061 72033358 -127596792 + AluSx SINE Alu 1 295 -17 227 160 80 0 chr5 72033469 72033519 -127596631 - L1MC/D LINE L1 -1939 5869 5816 * 23420 22 4 0 chr5 72033517 72036381 -127593769 - L1PA3 LINE L1 -631 5524 2648 5317 28 0 3 chr5 72036381 72036982 -127593168 + L1PA3 LINE L1 5547 6152 -3 23 0 0 0 chr5 72036994 72037017 -127593133 + AT_rich Low_complexity Low_complexity 1 23 0 395 274 201 46 chr5 72037020 72037206 -127592944 - L1MC/D LINE L1 -1984 5824 5668 2415 84 0 7 chr5 72037206 72037504 -127592646 - AluSg SINE Alu -14 296 1 395 274 201 46 chr5 72037504 72037795 -127592355 - L1MC/D LINE L1 -2140 5668 5273 2625 225 27 39 chr5 72037814 72038272 -127591878 - MER82 DNA MER2_type 0 653 204 2053 142 0 3 chr5 72038272 72038561 -127591589 - AluSx SINE Alu -24 288 1 2625 225 27 39 chr5 72038561 72038763 -127591387 - MER82 DNA MER2_type -449 204 1 2441 151 48 87 chr5 72038769 72039086 -127591064 - Looper DNA T2_type -73 1485 1204 585 203 49 8 chr5 72039086 72039209 -127590941 - FLAM_A SINE Alu -3 130 3 2441 151 48 87 chr5 72039209 72039532 -127590618 - Looper DNA T2_type -354 1204 870 1792 230 122 131 chr5 72039543 72040149 -127590001 - L2 LINE L2 -338 2976 2250 847 156 0 7 chr5 72040149 72040284 -127589866 + AluJo SINE Alu 1 134 -178 1792 230 122 131 chr5 72040284 72040760 -127589390 - L2 LINE L2 -1064 2250 1771 281 254 159 0 chr5 72040955 72041081 -127589069 - L2 LINE L2 -2959 355 210 1479 116 23 9 chr5 72041086 72041302 -127588848 + MSTA LTR MaLR 210 428 0 8499 176 34 2 chr5 72041302 72041443 -127588707 + MSTA-int LTR MaLR 1 136 -1515 2418 85 3 7 chr5 72041443 72041749 -127588401 - AluSx SINE Alu -6 306 2 8499 176 34 2 chr5 72041749 72043218 -127586932 + MSTA-int LTR MaLR 136 1651 0 1813 144 99 31 chr5 72043218 72043571 -127586579 + MSTA LTR MaLR 1 377 -51 243 274 126 15 chr5 72043605 72043740 -127586410 - L2 LINE L2 -3064 250 101 298 136 85 0 chr5 72043774 72043833 -127586317 - MER58 DNA MER1_type -16 2404 2341 258 146 0 0 chr5 72043834 72043875 -127586275 - MER58 DNA MER1_type -247 94 54 2418 92 3 0 chr5 72043962 72044266 -127585884 - AluSp SINE Alu -8 305 1 990 242 158 83 chr5 72044535 72045167 -127584983 + LTR41 LTR ERVL 7 590 -183 2304 149 8 0 chr5 72045167 72045529 -127584621 + MER47A DNA MER2_type 1 365 -1 2116 90 3 60 chr5 72045532 72045854 -127584296 - AluSx SINE Alu 0 305 1 990 242 158 83 chr5 72045854 72045927 -127584223 + LTR41 LTR ERVL 591 770 -3 541 121 36 121 chr5 72046213 72046353 -127583797 - L1MA9 LINE L1 0 6312 6185 2161 119 0 13 chr5 72046385 72046687 -127583463 - AluSx SINE Alu -14 298 1 189 0 0 0 chr5 72047496 72047517 -127582633 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr5 72047549 72047570 -127582580 + AT_rich Low_complexity Low_complexity 1 21 0 623 136 0 182 chr5 72048155 72048213 -127581937 - FLAM_A SINE Alu -176 126 112 2670 58 0 0 chr5 72048213 72048523 -127581627 - AluY SINE Alu -1 310 1 623 136 0 182 chr5 72048523 72048618 -127581532 - FLAM_A SINE Alu -190 112 1 2301 118 0 3 chr5 72048854 72049167 -127580983 + AluSx SINE Alu 1 312 0 1687 168 31 24 chr5 72049453 72049745 -127580405 - AluJo SINE Alu -18 294 1 341 188 0 29 chr5 72050156 72050225 -127579925 - L2 LINE L2 -1 3271 3205 2585 65 0 0 chr5 72050455 72050762 -127579388 - AluY SINE Alu -4 307 1 1930 105 4 0 chr5 72051084 72051341 -127578809 + AluSq SINE Alu 56 313 0 286 129 43 57 chr5 72051342 72051412 -127578738 + L1ME3A LINE L1 6095 6163 -7 1447 223 76 34 chr5 72052337 72052732 -127577418 - L1MC4 LINE L1 -1140 6902 6486 2238 118 0 3 chr5 72052732 72053037 -127577113 - AluSx SINE Alu -8 304 1 1447 223 76 34 chr5 72053037 72053077 -127577073 - L1MC4 LINE L1 -1556 6486 6449 1649 171 33 23 chr5 72054074 72054379 -127575771 - AluJo SINE Alu -4 308 1 337 383 54 0 chr5 72054740 72054907 -127575243 + MIR3 SINE MIR 27 202 -6 2298 106 0 3 chr5 72054945 72055257 -127574893 + AluSx SINE Alu 1 311 -1 2310 104 0 10 chr5 72055273 72055581 -127574569 + AluSx SINE Alu 1 305 -7 192 234 0 0 chr5 72055661 72055708 -127574442 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 1926 146 20 10 chr5 72055708 72056009 -127574141 - AluJo SINE Alu -8 304 1 276 96 58 0 chr5 72056352 72056404 -127573746 - AluSp/q SINE Alu -1 302 248 2059 117 4 7 chr5 72056420 72056701 -127573449 - AluSq SINE Alu -33 280 1 562 257 40 107 chr5 72056706 72056856 -127573294 + MIR SINE MIR 12 140 -122 2459 57 14 0 chr5 72056856 72057153 -127572997 + AluY SINE Alu 1 301 -10 562 257 40 107 chr5 72057153 72057255 -127572895 + MIR SINE MIR 140 247 -15 2422 93 0 16 chr5 72057827 72058139 -127572011 + AluSg SINE Alu 1 307 -3 3481 157 92 69 chr5 72058139 72058714 -127571436 + L1MB4 LINE L1 4886 5446 -734 1813 156 3 50 chr5 72058714 72058811 -127571339 + AluJo SINE Alu 1 101 -211 2480 84 0 0 chr5 72058811 72059120 -127571030 + AluSx SINE Alu 3 311 -1 1813 156 3 50 chr5 72059120 72059342 -127570808 + AluJo SINE Alu 101 305 -7 2091 142 0 0 chr5 72059344 72059640 -127570510 + AluSx SINE Alu 1 296 -16 3481 157 92 69 chr5 72059640 72060181 -127569969 + L1MB4 LINE L1 5446 6033 -147 2281 98 3 3 chr5 72060181 72060488 -127569662 - AluSx SINE Alu -5 307 1 3481 157 92 69 chr5 72060488 72060638 -127569512 + L1MB4 LINE L1 6033 6178 -2 415 243 66 7 chr5 72060631 72060783 -127569367 + L1MDa LINE L1 1554 1714 -4826 * 321 204 114 42 chr5 72060785 72060952 -127569198 + L1 LINE L1 4337 4515 -1631 25 0 0 0 chr5 72061099 72061124 -127569026 + AT_rich Low_complexity Low_complexity 1 25 0 1995 149 0 0 chr5 72063718 72064038 -127566112 + AluJb SINE Alu 1 320 0 275 356 77 0 chr5 72065152 72065256 -127564894 + L2 LINE L2 3153 3264 -8 213 39 0 0 chr5 72065500 72065526 -127564624 + (TTG)n Simple_repeat Simple_repeat 2 27 0 727 172 0 37 chr5 72065528 72065662 -127564488 - FLAM_C SINE Alu -4 129 1 857 160 55 38 chr5 72065931 72066168 -127563982 + L1MD3 LINE L1 7755 7995 0 2015 141 0 20 chr5 72066183 72066487 -127563663 + AluSx SINE Alu 5 302 -10 2236 109 0 0 chr5 72066490 72066810 -127563340 + AluSq SINE Alu 1 320 0 1607 171 47 27 chr5 72066826 72067125 -127563025 + AluJb SINE Alu 2 306 -6 1243 181 181 0 chr5 72067381 72067641 -127562509 - AluSx SINE Alu -5 307 1 1836 206 46 90 chr5 72067856 72067941 -127562209 + L1MDa LINE L1 1959 2046 -4675 2342 108 0 0 chr5 72067941 72068246 -127561904 + AluSg SINE Alu 1 305 -5 1836 206 46 90 chr5 72068246 72068537 -127561613 + L1MDa LINE L1 2046 2290 -4431 2019 134 0 7 chr5 72068537 72068828 -127561322 - AluSx SINE Alu -23 289 1 1836 206 46 90 chr5 72068828 72069173 -127560977 + L1MDa LINE L1 2290 2649 -4072 2595 59 0 3 chr5 72069174 72069478 -127560672 + AluY SINE Alu 1 303 -8 1696 187 10 3 chr5 72069530 72069835 -127560315 + AluJb SINE Alu 2 308 -4 918 134 14 7 chr5 72069873 72070015 -127560135 + BC200 scRNA scRNA 1 143 -57 1595 206 3 3 chr5 72070127 72070419 -127559731 - AluJo SINE Alu -17 295 4 2629 65 3 0 chr5 72070542 72070851 -127559299 + AluSp SINE Alu 2 311 -2 1182 273 59 21 chr5 72070879 72071355 -127558795 + L1ME3A LINE L1 5458 5951 -219 2090 121 16 10 chr5 72071499 72071806 -127558344 - AluSx SINE Alu -3 309 1 1840 138 3 43 chr5 72071984 72072288 -127557862 + AluJo SINE Alu 1 292 -20 2324 89 0 7 chr5 72072295 72072598 -127557552 + AluSx SINE Alu 1 301 -11 1176 222 63 107 chr5 72073060 72073549 -127556601 + HAL1 LINE L1 1437 1897 -610 2301 119 0 3 chr5 72073549 72073859 -127556291 + AluSx SINE Alu 1 309 -3 1176 222 63 107 chr5 72073859 72073960 -127556190 + HAL1 LINE L1 1897 2001 -506 27 29 0 0 chr5 72073969 72074003 -127556147 + AT_rich Low_complexity Low_complexity 1 34 0 2411 65 3 26 chr5 72074063 72074372 -127555778 + AluY SINE Alu 1 302 -9 232 156 195 39 chr5 72074379 72074456 -127555694 + L1MB5 LINE L1 5463 5551 -629 * 873 197 10 40 chr5 72074447 72074645 -127555505 + L1MB5 LINE L1 5903 6094 -80 2847 186 19 43 chr5 72074645 72074718 -127555432 + L1MB5 LINE L1 5535 5608 -566 2130 114 30 3 chr5 72074718 72075016 -127555134 + AluSx SINE Alu 1 306 -6 2847 186 19 43 chr5 72075016 72075561 -127554589 + L1MB5 LINE L1 5608 6140 -34 1747 175 7 10 chr5 72075561 72075869 -127554281 + AluJo SINE Alu 2 308 -4 2847 186 19 43 chr5 72075869 72075894 -127554256 + L1MB5 LINE L1 6140 6164 -10 495 295 27 42 chr5 72075898 72076159 -127553991 + HAL1 LINE L1 2012 2268 -239 2317 106 0 0 chr5 72076692 72076993 -127553157 + AluSq SINE Alu 1 301 -12 348 224 84 9 chr5 72076993 72077100 -127553050 + L2 LINE L2 3199 3313 0 705 201 27 134 chr5 72077934 72078078 -127552072 + MLT1J LTR MaLR 1 159 -352 252 0 0 0 chr5 72078078 72078106 -127552044 + (TAA)n Simple_repeat Simple_repeat 1 28 0 705 201 27 134 chr5 72078106 72078123 -127552027 + MLT1J LTR MaLR 159 176 -335 2358 87 0 3 chr5 72078123 72078412 -127551738 - AluSq SINE Alu -25 288 1 705 201 27 134 chr5 72078412 72078473 -127551677 + MLT1J LTR MaLR 176 200 -311 922 175 62 0 chr5 72078664 72078824 -127551326 + AluJb SINE Alu 137 306 -6 1892 115 61 17 chr5 72078850 72079145 -127551005 + AluY SINE Alu 1 308 -3 1908 92 34 95 chr5 72079740 72079959 -127550191 - AluSx SINE Alu -5 307 113 2468 73 0 25 chr5 72079959 72080273 -127549877 - AluY SINE Alu -5 306 1 1908 92 34 95 chr5 72080273 72080380 -127549770 - AluSx SINE Alu -199 113 1 399 41 0 0 chr5 72080546 72080595 -127549555 + (CA)n Simple_repeat Simple_repeat 2 50 0 225 157 14 86 chr5 72080775 72080845 -127549305 + MLT1K LTR MaLR 44 108 -480 328 227 0 13 chr5 72080858 72080933 -127549217 + MLT1K LTR MaLR 487 560 -28 26 0 0 0 chr5 72081418 72081444 -127548706 + AT_rich Low_complexity Low_complexity 1 26 0 1465 147 0 4 chr5 72081833 72082064 -127548086 + AluJb SINE Alu 71 300 -12 2409 92 0 0 chr5 72082135 72082438 -127547712 + AluSg SINE Alu 1 303 -7 2192 133 0 0 chr5 72082567 72082875 -127547275 + AluSx SINE Alu 1 308 -4 217 139 76 13 chr5 72083924 72084003 -127546147 + CT-rich Low_complexity Low_complexity 2 85 0 557 212 0 8 chr5 72084010 72084128 -127546022 - AluJb SINE Alu -195 117 1 246 296 19 46 chr5 72084564 72084672 -127545478 - MER91C DNA MER1_type -35 105 1 223 245 31 20 chr5 72084889 72084987 -127545163 + CT-rich Low_complexity Low_complexity 1 99 0 1578 101 5 0 chr5 72085267 72085474 -127544676 - AluSx SINE Alu -16 294 87 201 118 59 0 chr5 72085476 72085527 -127544623 + GA-rich Low_complexity Low_complexity 3 56 0 569 127 0 0 chr5 72085541 72085620 -127544530 - AluSx SINE Alu -232 80 2 2382 108 0 0 chr5 72085621 72085927 -127544223 - AluSx SINE Alu -6 306 1 2081 129 13 3 chr5 72086080 72086389 -127543761 + AluSx SINE Alu 1 312 0 676 270 9 28 chr5 72086390 72086601 -127543549 + L1MC5 LINE L1 7304 7510 -451 1838 148 0 83 chr5 72086610 72086949 -127543201 + AluJb SINE Alu 1 311 -1 1827 152 45 3 chr5 72086965 72087254 -127542896 + AluSx SINE Alu 1 301 -11 1708 156 17 21 chr5 72087678 72087833 -127542317 - AluJb SINE Alu -25 287 132 2346 76 3 0 chr5 72087833 72088124 -127542026 - AluY SINE Alu -19 292 1 1708 156 17 21 chr5 72088124 72088256 -127541894 - AluJb SINE Alu -180 132 1 1845 171 7 0 chr5 72088509 72088807 -127541343 + AluSx SINE Alu 1 300 -12 208 349 57 0 chr5 72089255 72089361 -127540789 + MIR SINE MIR 38 149 -59 459 256 0 26 chr5 72090631 72090748 -127539402 - L2 LINE L2 0 3313 3200 2555 52 0 7 chr5 72090915 72091221 -127538929 + AluY SINE Alu 1 304 -7 1878 110 8 0 chr5 72091662 72091917 -127538233 - AluSx SINE Alu -16 296 40 315 167 0 0 chr5 72091918 72091966 -127538184 - AluSp/q SINE Alu -29 274 227 2287 94 3 3 chr5 72092179 72092477 -127537673 + AluSx SINE Alu 1 298 -14 1485 191 4 8 chr5 72092653 72092904 -127537246 + AluJo SINE Alu 1 250 -62 1213 108 10 82 chr5 72093040 72093230 -127536920 + AluSx SINE Alu 4 179 -133 1945 116 56 11 chr5 72093230 72093514 -127536636 + AluSg SINE Alu 1 297 -13 1402 161 0 52 chr5 72093514 72093561 -127536589 - L1MB8 LINE L1 -22 6156 6108 1594 175 7 48 chr5 72093561 72093870 -127536280 + AluJo SINE Alu 5 300 -12 1402 161 0 52 chr5 72093870 72094132 -127536018 - L1MB8 LINE L1 -70 6108 5863 794 138 27 98 chr5 72094187 72094397 -127535753 - L1MB8 LINE L1 -324 5860 5665 1569 139 65 81 chr5 72094397 72094706 -127535444 - AluJb SINE Alu -8 304 1 794 138 27 98 chr5 72094706 72094720 -127535430 - L1MB8 LINE L1 -519 5665 5652 748 120 0 0 chr5 72095014 72095114 -127535036 + AluJ/FLAM SINE Alu 3 102 -210 2160 109 0 7 chr5 72095114 72095399 -127534751 - AluSx SINE Alu -29 283 1 957 188 0 33 chr5 72095400 72095581 -127534569 - FRAM SINE Alu -1 175 1 2051 116 23 10 chr5 72096639 72096941 -127533209 + AluSx SINE Alu 1 306 -6 1869 141 3 30 chr5 72096946 72097251 -127532899 + AluJb SINE Alu 1 297 -15 604 188 128 0 chr5 72097629 72097746 -127532404 + FLAM_A SINE Alu 1 132 -1 204 264 19 0 chr5 72097967 72098020 -127532130 + MIR3 SINE MIR 146 199 -9 231 243 14 40 chr5 72098049 72098123 -127532027 - MIR SINE MIR -189 73 2 979 196 0 0 chr5 72098481 72098649 -127531501 - FRAM SINE Alu -8 168 1 494 271 145 22 chr5 72098773 72098978 -127531172 - HAL1 LINE L1 -1137 1370 1192 1724 143 7 18 chr5 72098978 72099258 -127530892 - AluJb SINE Alu -35 277 1 494 271 145 22 chr5 72099258 72099562 -127530588 - HAL1 LINE L1 -1315 1192 798 1904 183 3 0 chr5 72099700 72100006 -127530144 - AluSx SINE Alu -5 307 1 763 241 68 38 chr5 72100672 72100938 -127529212 - MER21B LTR ERV1 -58 805 532 1168 171 25 8 chr5 72100953 72101198 -127528952 - LTR9 LTR ERV1 -80 532 284 2823 171 18 13 chr5 72101198 72101746 -127528404 - HUERS-P3b LTR ERV1 -8227 692 142 256 163 0 0 chr5 72101742 72101785 -127528365 - HUERS-P3b LTR ERV1 -6491 927 885 * 610 148 41 8 chr5 72101797 72101919 -127528231 - HUERS-P3b LTR ERV1 -8791 128 3 687 147 47 47 chr5 72101921 72102091 -127528059 - LTR9 LTR ERV1 0 612 443 1613 237 73 34 chr5 72102097 72102604 -127527546 - MER21B LTR ERV1 -318 545 19 430 191 22 11 chr5 72102626 72102715 -127527435 - MER21B LTR ERV1 -773 90 1 530 210 43 29 chr5 72102723 72102861 -127527289 - MIR SINE MIR -24 238 99 2270 101 0 0 chr5 72102917 72103213 -127526937 - AluSc SINE Alu -13 296 1 430 310 51 5 chr5 72103809 72104006 -127526144 - L1M4 LINE L1 -1975 4171 3966 1015 224 43 18 chr5 72104163 72104213 -127525937 - L1M4 LINE L1 -758 5388 5341 2453 70 0 7 chr5 72104213 72104512 -127525638 - AluSg SINE Alu -13 297 1 1015 224 43 18 chr5 72104512 72104787 -127525363 - L1M4 LINE L1 -805 5341 5055 1896 212 75 43 chr5 72104808 72105475 -127524675 + L1ME2 LINE L1 5486 6331 -3 2591 35 0 19 chr5 72105532 72105844 -127524306 + AluY SINE Alu 1 306 -5 2616 36 0 0 chr5 72105877 72106183 -127523967 - AluY SINE Alu -5 306 1 724 226 25 75 chr5 72106295 72106415 -127523735 - MER5A DNA MER1_type 0 189 81 2297 101 0 0 chr5 72106415 72106711 -127523439 - AluSg SINE Alu -14 296 1 724 226 25 75 chr5 72106711 72106789 -127523361 - MER5A DNA MER1_type -108 81 1 1615 175 35 3 chr5 72106858 72107144 -127523006 + AluJo SINE Alu 1 295 -17 2150 122 0 10 chr5 72107189 72107500 -127522650 + AluSx SINE Alu 1 308 -4 257 240 115 10 chr5 72107615 72107711 -127522439 + MER102a DNA MER1_type 24 129 -201 1891 186 0 19 chr5 72107714 72108032 -127522118 + AluJb SINE Alu 1 312 0 350 241 0 37 chr5 72108216 72108324 -127521826 + MER102a DNA MER1_type 214 317 -13 226 349 75 9 chr5 72108446 72108552 -127521598 + L2 LINE L2 3201 3313 0 2514 64 0 0 chr5 72109494 72109792 -127520358 + AluY SINE Alu 1 298 -13 308 257 61 94 chr5 72109827 72110072 -127520078 + L1MCa LINE L1 2197 2433 -3993 346 138 41 0 chr5 72110073 72110196 -127519954 + (TA)n Simple_repeat Simple_repeat 1 128 0 27 29 0 0 chr5 72110222 72110256 -127519894 + AT_rich Low_complexity Low_complexity 1 34 0 270 0 0 0 chr5 72110960 72110990 -127519160 + (TG)n Simple_repeat Simple_repeat 2 31 0 1827 116 0 0 chr5 72111111 72111370 -127518780 + AluSx SINE Alu 42 300 -12 2577 50 0 0 chr5 72111461 72111763 -127518387 - AluY SINE Alu -9 302 1 2203 79 24 14 chr5 72112504 72112796 -127517354 - AluSx SINE Alu -17 295 1 22 35 0 0 chr5 72112901 72112930 -127517220 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr5 72113061 72113086 -127517064 + AT_rich Low_complexity Low_complexity 1 25 0 2080 137 7 0 chr5 72114019 72114318 -127515832 + AluSx SINE Alu 1 301 -11 26 30 0 0 chr5 72114376 72114409 -127515741 + AT_rich Low_complexity Low_complexity 1 33 0 31 26 0 0 chr5 72114433 72114471 -127515679 + AT_rich Low_complexity Low_complexity 1 38 0 31 26 0 0 chr5 72114791 72114829 -127515321 + AT_rich Low_complexity Low_complexity 1 38 0 2304 104 0 0 chr5 72115233 72115540 -127514610 + AluSq SINE Alu 1 307 -6 1881 150 27 0 chr5 72115637 72115930 -127514220 - AluJo SINE Alu -11 301 1 1967 232 115 29 chr5 72115976 72116878 -127513272 - HAL1 LINE L1 -191 2316 1337 651 220 0 0 chr5 72116878 72117010 -127513140 - FLAM_C SINE Alu -11 132 1 573 229 84 28 chr5 72117014 72117263 -127512887 - HAL1 LINE L1 -1162 1345 1083 370 277 127 29 chr5 72117261 72117609 -127512541 + L1MC/D LINE L1 5388 5777 -346 * 2191 90 10 3 chr5 72117768 72118058 -127512092 - AluSq SINE Alu -16 297 6 2264 109 3 0 chr5 72118218 72118512 -127511638 - AluSp SINE Alu -18 295 1 658 137 0 0 chr5 72118512 72118614 -127511536 - AluJo/FLAM SINE Alu -179 133 32 498 171 0 0 chr5 72118712 72118794 -127511356 - MER63 DNA MER1_type -315 747 40 2090 91 52 3 chr5 72119934 72120221 -127509929 + AluSq SINE Alu 1 301 -12 682 183 48 24 chr5 72120240 72120366 -127509784 - FLAM_C SINE Alu -12 131 3 2291 124 0 0 chr5 72120443 72120742 -127509408 - AluSx SINE Alu -13 299 1 3087 230 48 64 chr5 72120748 72120991 -127509159 - L1MEc LINE L1 -5239 1157 912 1929 158 7 0 chr5 72120991 72121289 -127508861 - AluSx SINE Alu -12 300 1 3087 230 48 64 chr5 72121289 72121608 -127508542 - L1MEc LINE L1 -5484 912 589 216 0 0 0 chr5 72121608 72121632 -127508518 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 3087 230 48 64 chr5 72121632 72122226 -127507924 - L1MEc LINE L1 -5807 589 19 21 57 0 0 chr5 72122236 72122271 -127507879 + AT_rich Low_complexity Low_complexity 1 35 0 1595 186 65 0 chr5 72122297 72122619 -127507531 + MER7A DNA MER2_type 1 341 -5 308 197 0 0 chr5 72122834 72122895 -127507255 - L1MC4a LINE L1 -1929 5879 5819 1106 158 28 0 chr5 72123286 72123463 -127506687 - AluSg/x SINE Alu -9 301 120 32 57 0 0 chr5 72123807 72123860 -127506290 + AT_rich Low_complexity Low_complexity 1 53 0 375 282 92 0 chr5 72123886 72124028 -127506122 - MIR SINE MIR -1 261 107 21 112 0 0 chr5 72124063 72124161 -127505989 + AT_rich Low_complexity Low_complexity 1 98 0 2362 85 0 10 chr5 72124216 72124521 -127505629 + AluSg SINE Alu 1 302 -8 2060 129 0 7 chr5 72124638 72124953 -127505197 - AluSx SINE Alu 0 313 1 25 0 0 0 chr5 72124961 72124986 -127505164 + AT_rich Low_complexity Low_complexity 1 25 0 2500 63 0 0 chr5 72124989 72125292 -127504858 - AluY SINE Alu -8 303 1 231 277 69 0 chr5 72125355 72125456 -127504694 + L1ME4a LINE L1 5999 6106 -15 204 163 0 23 chr5 72125826 72125869 -127504281 + (TTA)n Simple_repeat Simple_repeat 2 43 0 724 197 8 0 chr5 72125881 72125998 -127504152 - FLAM_C SINE Alu -15 118 1 22 0 0 0 chr5 72126228 72126250 -127503900 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 72126270 72126295 -127503855 + AT_rich Low_complexity Low_complexity 1 25 0 394 282 17 17 chr5 72126888 72127005 -127503145 - L2 LINE L2 -9 3304 3188 737 119 0 34 chr5 72127159 72127245 -127502905 - MER44D DNA MER2_type -1883 604 522 1881 167 39 0 chr5 72127245 72127575 -127502575 + MER2 DNA MER2_type 1 343 -1 737 119 0 34 chr5 72127575 72127595 -127502555 - MER44D DNA MER2_type -1965 522 502 2351 138 50 75 chr5 72127595 72127729 -127502421 - Tigger1 DNA MER2_type 0 2418 2282 1837 68 141 4 chr5 72127729 72127992 -127502158 + AluY SINE Alu 1 299 -2 2351 138 50 75 chr5 72127992 72128380 -127501770 - Tigger1 DNA MER2_type -136 2282 1909 2215 112 3 0 chr5 72128385 72128681 -127501469 - AluSx SINE Alu -15 297 1 9309 124 31 29 chr5 72128683 72129298 -127500852 - Tigger1 DNA MER2_type -800 1618 1006 1859 141 23 20 chr5 72129298 72129602 -127500548 + AluJo SINE Alu 1 305 -7 9309 124 31 29 chr5 72129602 72129702 -127500448 - Tigger1 DNA MER2_type -1412 1006 908 2339 94 0 3 chr5 72129702 72130001 -127500149 - AluSg SINE Alu -12 298 1 9309 124 31 29 chr5 72130001 72130285 -127499865 - Tigger1 DNA MER2_type -1510 908 626 1616 168 13 52 chr5 72130285 72130594 -127499556 - AluJo SINE Alu -15 297 1 9309 124 31 29 chr5 72130594 72131205 -127498945 - Tigger1 DNA MER2_type -1792 626 2 1868 176 83 19 chr5 72131205 72131625 -127498525 - MER44D DNA MER2_type -102 503 2 1772 123 8 4 chr5 72131974 72132226 -127497924 + AluSx SINE Alu 37 289 -23 423 0 0 0 chr5 72132232 72132279 -127497871 + (TG)n Simple_repeat Simple_repeat 2 48 0 233 65 48 48 chr5 72132335 72132397 -127497753 + (TA)n Simple_repeat Simple_repeat 1 62 0 269 75 0 0 chr5 72132489 72132529 -127497621 + MADE1 DNA Mariner 6 45 -35 23 68 0 0 chr5 72132569 72132613 -127497537 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr5 72132650 72132673 -127497477 + AT_rich Low_complexity Low_complexity 1 23 0 1385 244 105 22 chr5 72133233 72133452 -127496698 + HsTC2 DNA Tc2 1 200 -1698 2000 146 0 3 chr5 72133452 72133754 -127496396 + AluSq SINE Alu 1 301 -12 1385 244 105 22 chr5 72133754 72134039 -127496111 + HsTC2 DNA Tc2 200 547 -1351 43 20 0 0 chr5 72134046 72134096 -127496054 + AT_rich Low_complexity Low_complexity 1 50 0 1639 166 4 19 chr5 72134096 72134367 -127495783 - AluJb SINE Alu -45 267 1 295 265 78 0 chr5 72134430 72134532 -127495618 + MER104 DNA Tc2 71 180 0 26 0 0 0 chr5 72134864 72134890 -127495260 + AT_rich Low_complexity Low_complexity 1 26 0 493 317 32 21 chr5 72135075 72135261 -127494889 - MIR3 SINE MIR -6 202 15 1980 111 54 7 chr5 72135452 72135749 -127494401 + AluSx SINE Alu 1 311 -1 451 251 71 66 chr5 72135801 72136012 -127494138 + MLT1K LTR MaLR 67 278 -310 2216 97 7 7 chr5 72136628 72136937 -127493213 + AluSc SINE Alu 1 309 0 23 33 0 0 chr5 72137266 72137296 -127492854 + AT_rich Low_complexity Low_complexity 1 30 0 946 114 0 0 chr5 72138490 72138613 -127491537 - FLAM_C SINE Alu -20 123 1 1665 236 28 26 chr5 72139331 72139583 -127490567 + L1MB8 LINE L1 5649 5899 -279 1878 137 108 3 chr5 72139583 72139897 -127490253 - MER7A DNA MER2_type -1 345 1 1665 236 28 26 chr5 72139897 72140173 -127489977 + L1MB8 LINE L1 5899 6178 0 1527 94 0 55 chr5 72140792 72141048 -127489102 - L1PA16 LINE L1 -566 5600 5359 2877 140 20 41 chr5 72141048 72141338 -127488812 + L1PA16 LINE L1 5620 5894 -272 1906 124 4 14 chr5 72141338 72141613 -127488537 + AluSq SINE Alu 1 272 -41 2877 140 20 41 chr5 72141613 72141878 -127488272 + L1PA16 LINE L1 5894 6163 -3 1996 129 10 7 chr5 72141901 72142203 -127487947 + AluSx SINE Alu 1 303 -9 1211 154 193 27 chr5 72142206 72142465 -127487685 + AluSq SINE Alu 1 302 -1 1859 141 4 0 chr5 72142488 72142764 -127487386 + AluSx SINE Alu 4 280 -32 948 109 0 14 chr5 72142849 72142987 -127487163 - AluSg/x SINE Alu -81 231 96 430 182 13 0 chr5 72142987 72143064 -127487086 - AluSq/x SINE Alu -182 130 53 2207 113 10 0 chr5 72143075 72143377 -127486773 - AluSq SINE Alu -8 305 1 1489 170 65 4 chr5 72143480 72143757 -127486393 + AluJo SINE Alu 2 295 -17 30 0 0 0 chr5 72143764 72143794 -127486356 + AT_rich Low_complexity Low_complexity 1 30 0 2000 105 16 30 chr5 72143838 72144143 -127486007 - AluSx SINE Alu -11 301 1 192 250 121 76 chr5 72144145 72144277 -127485873 + L3 LINE CR1 1374 1511 -66 2413 65 3 0 chr5 72144356 72144647 -127485503 + AluSc SINE Alu 1 292 -17 1054 276 120 7 chr5 72145582 72145805 -127484345 - L2 LINE L2 -5 3308 3112 1869 93 45 31 chr5 72145805 72146094 -127484056 + AluSx SINE Alu 1 293 -19 1054 276 120 7 chr5 72146094 72146312 -127483838 - L2 LINE L2 -201 3112 2817 437 235 309 0 chr5 72146294 72146566 -127483584 - L2 LINE L2 -652 2662 2307 * 259 214 135 22 chr5 72146796 72146885 -127483265 + MIR SINE MIR 47 145 -117 325 192 71 20 chr5 72148049 72148148 -127482002 - MIR SINE MIR -93 169 66 308 267 113 20 chr5 72148852 72149002 -127481148 + MIR SINE MIR 41 204 -58 256 275 158 17 chr5 72149300 72149420 -127480730 - MIR3 SINE MIR -7 201 65 2474 75 0 16 chr5 72149844 72150151 -127479999 + AluSp SINE Alu 1 302 -11 198 0 0 0 chr5 72150152 72150174 -127479976 + (CA)n Simple_repeat Simple_repeat 2 23 0 2291 106 7 0 chr5 72150177 72150470 -127479680 + AluSg SINE Alu 1 295 -15 254 261 11 11 chr5 72151317 72151405 -127478745 + MIR SINE MIR 119 206 -56 936 199 0 6 chr5 72152267 72152433 -127477717 - FRAM SINE Alu -14 162 1 29 28 0 0 chr5 72152434 72152470 -127477680 + AT_rich Low_complexity Low_complexity 1 36 0 1531 223 129 62 chr5 72152475 72152775 -127477375 + L1ME3A LINE L1 5472 5750 -420 2311 104 0 0 chr5 72152775 72153073 -127477077 + AluSx SINE Alu 1 298 -14 1531 223 129 62 chr5 72153073 72153085 -127477065 + L1ME3A LINE L1 5750 5760 -410 2102 113 25 0 chr5 72153085 72153367 -127476783 + AluSx SINE Alu 1 289 -23 1531 223 129 62 chr5 72153367 72153708 -127476442 + L1ME3A LINE L1 5760 6169 -1 410 285 77 43 chr5 72154813 72154919 -127475231 + L1ME3 LINE L1 5549 5650 -471 2388 99 0 0 chr5 72154919 72155221 -127474929 + AluSx SINE Alu 1 302 -10 410 285 77 43 chr5 72155221 72155349 -127474801 + L1ME3 LINE L1 5650 5791 -330 850 199 44 19 chr5 72155499 72155705 -127474445 + L1MC3 LINE L1 6858 7068 -717 301 107 119 107 chr5 72155746 72155830 -127474320 + L1MC3 LINE L1 7175 7259 -526 2529 67 0 32 chr5 72156043 72156359 -127473791 - AluY SINE Alu -5 306 1 23 0 0 0 chr5 72156419 72156442 -127473708 + AT_rich Low_complexity Low_complexity 1 23 0 2055 121 0 7 chr5 72156442 72156731 -127473419 - AluSx SINE Alu -25 287 1 2499 59 0 23 chr5 72156788 72157092 -127473058 + AluY SINE Alu 1 297 -14 2400 91 7 0 chr5 72157811 72158118 -127472032 - AluSx SINE Alu -3 309 1 2355 93 0 0 chr5 72158630 72158919 -127471231 + AluSx SINE Alu 1 289 -23 2275 79 10 3 chr5 72159371 72159662 -127470488 + AluSx SINE Alu 1 293 -19 1047 138 0 38 chr5 72159765 72159924 -127470226 - FRAM SINE Alu -24 152 1 2112 127 10 0 chr5 72161592 72161884 -127468266 + AluSx SINE Alu 1 295 -17 476 148 0 25 chr5 72162297 72162378 -127467772 - AluJo SINE Alu -148 164 86 300 212 280 25 chr5 72162416 72162534 -127467616 - MLT1K LTR MaLR -284 304 157 2111 144 0 10 chr5 72162904 72163216 -127466934 + AluSx SINE Alu 1 309 -3 916 185 0 0 chr5 72163216 72163367 -127466783 + AluJo/FRAM SINE Alu 138 288 -24 180 0 0 0 chr5 72163371 72163391 -127466759 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 296 254 166 55 chr5 72163394 72163575 -127466575 + MLT1K LTR MaLR 341 541 -47 805 114 0 45 chr5 72163584 72163716 -127466434 - FLAM_C SINE Alu -3 130 5 689 234 75 54 chr5 72164057 72164335 -127465815 + L1ME3 LINE L1 5863 6146 -16 2363 86 3 3 chr5 72165084 72165386 -127464764 + AluY SINE Alu 1 302 -9 2023 94 33 11 chr5 72165460 72165764 -127464386 + AluSx SINE Alu 1 310 0 241 261 52 97 chr5 72166538 72166598 -127463552 - MIR SINE MIR -111 151 90 2213 100 3 13 chr5 72166598 72166898 -127463252 + AluSg SINE Alu 1 297 -13 241 261 52 97 chr5 72166898 72166971 -127463179 - MIR SINE MIR -172 90 24 2131 123 3 3 chr5 72167127 72167419 -127462731 - AluSg SINE Alu -18 292 1 282 234 32 11 chr5 72167462 72167556 -127462594 + MLT1L LTR MaLR 512 607 -8 1226 104 74 207 chr5 72167698 72168036 -127462114 - 7SLRNA srpRNA srpRNA -27 293 1 258 343 10 20 chr5 72168036 72168154 -127461996 - MIR SINE MIR -61 147 35 1566 152 26 26 chr5 72168220 72168490 -127461660 - AluJb SINE Alu -6 306 37 180 0 0 0 chr5 72168528 72168548 -127461602 + (TTG)n Simple_repeat Simple_repeat 2 21 0 486 108 0 0 chr5 72168658 72168723 -127461427 + AluJ/FRAM SINE Alu 221 285 -27 183 156 0 0 chr5 72168813 72168845 -127461305 + A-rich Low_complexity Low_complexity 1 32 0 243 303 10 10 chr5 72168846 72168945 -127461205 + MIR SINE MIR 156 254 -8 201 333 22 0 chr5 72169894 72169984 -127460166 - MIR SINE MIR -111 151 60 600 171 19 0 chr5 72170255 72170360 -127459790 + U6 snRNA snRNA 1 107 0 755 168 0 0 chr5 72170786 72170905 -127459245 - FLAM_A SINE Alu -13 129 11 1715 104 4 4 chr5 72171069 72171299 -127458851 + AluSx SINE Alu 1 230 -82 234 215 17 81 chr5 72171400 72171572 -127458578 + T-rich Low_complexity Low_complexity 3 163 0 6899 63 19 36 chr5 72171616 72172582 -127457568 + SVA Other Other 432 1380 -6 2939 205 35 34 chr5 72174350 72175066 -127455084 + L1MB8 LINE L1 4436 5155 -991 2418 95 7 0 chr5 72175066 72175371 -127454779 - AluSq SINE Alu -6 307 1 2939 205 35 34 chr5 72175371 72175419 -127454731 + L1MB8 LINE L1 5155 5201 -945 1715 144 21 18 chr5 72175419 72175704 -127454446 + AluJb SINE Alu 19 304 -8 3930 162 57 40 chr5 72175705 72175732 -127454418 + L1MB8 LINE L1 5308 5333 -845 2296 78 3 33 chr5 72175732 72176038 -127454112 + AluY SINE Alu 1 297 -14 3930 162 57 40 chr5 72176038 72176418 -127453732 + L1MB8 LINE L1 5333 5705 -473 2348 81 0 10 chr5 72176418 72176714 -127453436 - AluY SINE Alu -18 293 1 3930 162 57 40 chr5 72176714 72177153 -127452997 + L1MB8 LINE L1 5705 6169 -9 236 314 128 10 chr5 72177153 72177255 -127452895 + MER5B DNA MER1_type 65 178 0 306 236 0 14 chr5 72178074 72178146 -127452004 - MER5A DNA MER1_type -8 181 111 698 256 63 14 chr5 72178146 72178353 -127451797 - L1ME LINE L1 -402 5768 5552 354 253 199 24 chr5 72178357 72178407 -127451743 + L1ME3A LINE L1 5755 5795 -369 1016 167 74 113 chr5 72178407 72178474 -127451676 + MER33 DNA MER1_type 1 69 -2516 2441 88 0 0 chr5 72178474 72178769 -127451381 + AluSx SINE Alu 1 295 -17 1016 167 74 113 chr5 72178769 72178812 -127451338 + MER33 DNA MER1_type 69 112 -2473 1535 141 0 33 chr5 72178812 72179053 -127451097 + AluSx SINE Alu 41 273 -39 1016 167 74 113 chr5 72179053 72179209 -127450941 + MER33 DNA MER1_type 112 255 -2330 2352 98 0 0 chr5 72179209 72179504 -127450646 + AluSq SINE Alu 1 295 -18 1016 167 74 113 chr5 72179504 72179571 -127450579 + MER33 DNA MER1_type 255 323 -1 354 253 199 24 chr5 72179571 72179686 -127450464 + L1ME3A LINE L1 5795 5949 -215 2000 143 24 0 chr5 72179686 72179980 -127450170 + AluSq SINE Alu 1 301 -12 296 238 206 25 chr5 72180051 72180211 -127449939 + L1ME3A LINE L1 5967 6155 -15 3869 167 68 54 chr5 72180378 72180829 -127449321 + MER21B LTR ERV1 2 470 -393 801 164 0 0 chr5 72180829 72180951 -127449199 - FLAM_A SINE Alu -11 122 1 3869 167 68 54 chr5 72180951 72181290 -127448860 + MER21B LTR ERV1 470 803 -60 1759 150 36 13 chr5 72181533 72181840 -127448310 + L1MB8 LINE L1 5860 6173 -5 2224 114 3 3 chr5 72181840 72182147 -127448003 - AluSp SINE Alu -6 307 1 2302 64 0 64 chr5 72182147 72182460 -127447690 - AluSc SINE Alu -16 293 1 1154 151 0 0 chr5 72183015 72183181 -127446969 - AluJb SINE Alu -30 282 117 194 238 0 0 chr5 72183527 72183569 -127446581 - L2 LINE L2 -5 3308 3267 375 281 180 28 chr5 72183968 72184185 -127445965 - MIR SINE MIR -6 256 7 1593 167 3 70 chr5 72184353 72184487 -127445663 + AluJo SINE Alu 7 148 -167 1905 131 3 24 chr5 72184487 72184784 -127445366 - AluSx SINE Alu -21 291 1 1593 167 3 70 chr5 72184784 72184978 -127445172 + AluJo SINE Alu 148 315 0 966 164 0 12 chr5 72185004 72185169 -127444981 - FRAM SINE Alu -3 163 1 28 22 0 22 chr5 72186322 72186346 -127443804 + AT_rich Low_complexity Low_complexity 1 25 -20 2031 116 7 27 chr5 72186346 72186647 -127443503 - AluSx SINE Alu -17 295 1 28 22 0 22 chr5 72186647 72186668 -127443482 + AT_rich Low_complexity Low_complexity 25 45 0 2183 114 3 0 chr5 72186744 72187034 -127443116 - AluSx SINE Alu -18 294 4 925 102 0 15 chr5 72187331 72187468 -127442682 + AluSc SINE Alu 174 308 -1 24 0 0 0 chr5 72187731 72187755 -127442395 + AT_rich Low_complexity Low_complexity 1 24 0 391 324 9 0 chr5 72187794 72187902 -127442248 - MIR SINE MIR -126 136 28 1235 156 71 14 chr5 72187909 72188120 -127442030 + AluJo SINE Alu 1 223 -89 2361 72 0 0 chr5 72188234 72188512 -127441638 + AluSg SINE Alu 1 278 -32 435 19 0 0 chr5 72188512 72188564 -127441586 + (TAA)n Simple_repeat Simple_repeat 1 52 0 25 65 0 0 chr5 72188606 72188652 -127441498 + AT_rich Low_complexity Low_complexity 1 46 0 510 307 0 0 chr5 72188663 72188800 -127441350 - MIR SINE MIR -70 192 56 2314 56 13 46 chr5 72188843 72189148 -127441002 + AluY SINE Alu 1 295 -16 21 0 0 0 chr5 72189288 72189309 -127440841 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 72189457 72189483 -127440667 + AT_rich Low_complexity Low_complexity 1 26 0 3096 14 0 0 chr5 72189483 72189829 -127440321 - L1PA2 LINE L1 -6 6149 5804 2111 133 7 0 chr5 72189842 72190142 -127440008 - AluSx SINE Alu -10 302 1 996 121 0 0 chr5 72191112 72191244 -127438906 + FLAM_C SINE Alu 1 132 -11 1809 172 3 7 chr5 72191332 72191617 -127438533 + AluJb SINE Alu 7 290 -22 195 42 0 0 chr5 72191621 72191645 -127438505 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1866 132 8 0 chr5 72191689 72191946 -127438204 + AluSx SINE Alu 1 259 -53 7452 96 13 22 chr5 72191953 72193034 -127437116 - MER11C LTR ERVK 0 1071 1 416 101 72 0 chr5 72193034 72193103 -127437047 + AluSc SINE Alu 236 309 0 886 153 0 0 chr5 72193123 72193254 -127436896 + FLAM_C SINE Alu 1 131 -2 211 127 18 18 chr5 72193661 72193716 -127436434 + (TTA)n Simple_repeat Simple_repeat 3 57 0 2176 119 7 7 chr5 72195662 72195972 -127434178 + AluSx SINE Alu 3 312 0 1758 170 0 37 chr5 72196744 72196927 -127433223 - AluJo SINE Alu 0 312 145 2415 81 14 0 chr5 72196927 72197224 -127432926 - AluY SINE Alu -10 301 1 1758 170 0 37 chr5 72197224 72197364 -127432786 - AluJo SINE Alu -167 145 1 1351 239 73 34 chr5 72197457 72198087 -127432063 - L2 LINE L2 -46 3267 2608 678 213 25 35 chr5 72198138 72198340 -127431810 - L1MC5 LINE L1 -35 7926 7727 22 0 0 0 chr5 72199490 72199512 -127430638 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 72199656 72199677 -127430473 + GC_rich Low_complexity Low_complexity 1 21 0 2048 152 0 0 chr5 72201059 72201368 -127428782 + AluSx SINE Alu 1 309 -3 2080 139 13 0 chr5 72201432 72201735 -127428415 - AluSx SINE Alu -5 307 1 624 292 97 40 chr5 72201740 72201896 -127428254 + L1ME LINE L1 5271 5417 -704 2098 117 14 3 chr5 72201896 72202187 -127427963 - AluSx SINE Alu -18 294 1 624 292 97 40 chr5 72202187 72202434 -127427716 + L1ME LINE L1 5417 5697 -424 22 35 0 0 chr5 72202507 72202536 -127427614 + AT_rich Low_complexity Low_complexity 1 29 0 2519 70 0 3 chr5 72202638 72202940 -127427210 + AluY SINE Alu 1 301 -10 2260 109 0 10 chr5 72203578 72203881 -127426269 - AluSq SINE Alu -13 300 1 360 0 0 0 chr5 72204011 72204051 -127426099 + (TA)n Simple_repeat Simple_repeat 2 41 0 284 324 95 7 chr5 72204117 72204265 -127425885 + L3 LINE CR1 1416 1576 -1 4715 158 40 0 chr5 72204545 72205353 -127424797 + L1MB2 LINE L1 5330 6169 -2 974 225 94 40 chr5 72205381 72205657 -127424493 + L1M4b LINE L1 11 301 -6558 4709 193 117 20 chr5 72205663 72206211 -127423939 + L1M4b LINE L1 407 900 -5955 2217 118 10 3 chr5 72206211 72206515 -127423635 + AluSx SINE Alu 1 306 -6 4709 193 117 20 chr5 72206515 72207170 -127422980 + L1M4b LINE L1 900 1770 -5085 1962 125 87 0 chr5 72207170 72207457 -127422693 + AluSx SINE Alu 1 312 0 4709 193 117 20 chr5 72207457 72207611 -127422539 + L1M4b LINE L1 1770 1908 -4947 1933 120 0 0 chr5 72207765 72208024 -127422126 + AluSx SINE Alu 44 302 -10 3306 141 50 62 chr5 72208040 72208222 -127421928 - L1MA8 LINE L1 -3 6288 6105 1870 157 0 20 chr5 72208222 72208521 -127421629 + AluJb SINE Alu 6 298 -14 3306 141 50 62 chr5 72208521 72208965 -127421185 - L1MA8 LINE L1 -186 6105 5668 2136 130 3 3 chr5 72208965 72209265 -127420885 - AluSx SINE Alu -12 300 1 3306 141 50 62 chr5 72209265 72209334 -127420816 - L1MA8 LINE L1 -623 5668 5600 2386 99 3 0 chr5 72209337 72209640 -127420510 - AluSp SINE Alu -9 304 1 986 79 8 0 chr5 72209677 72209803 -127420347 - AluSg SINE Alu -183 127 1 1398 144 54 36 chr5 72209803 72210081 -127420069 - L1MA8 LINE L1 -693 5607 5325 1237 142 10 20 chr5 72210081 72210232 -127419918 - AluJb SINE Alu -26 286 136 2268 111 0 3 chr5 72210232 72210539 -127419611 - AluSq SINE Alu -7 306 1 1237 142 10 20 chr5 72210539 72210591 -127419559 - AluJb SINE Alu -176 136 85 1167 133 38 5 chr5 72210593 72210804 -127419346 - L1MA8 LINE L1 -817 5329 5112 1782 146 3 52 chr5 72211066 72211375 -127418775 - AluJb SINE Alu -18 294 1 1019 164 60 71 chr5 72211606 72211875 -127418275 + L1MC4 LINE L1 7444 7709 -333 724 166 0 43 chr5 72211875 72212014 -127418136 + FLAM_C SINE Alu 2 134 -9 765 186 72 12 chr5 72212014 72212181 -127417969 + L1MC4 LINE L1 7697 7873 -169 2342 84 3 10 chr5 72212299 72212595 -127417555 + AluSq SINE Alu 1 294 -19 2364 78 0 53 chr5 72212621 72212943 -127417207 - AluY SINE Alu -6 305 1 1404 84 21 5 chr5 72213428 72213619 -127416531 - AluSg/x SINE Alu -15 297 104 397 146 3 0 chr5 72213619 72213689 -127416461 - Alu SINE Alu -246 56 2 2154 126 3 0 chr5 72213703 72213997 -127416153 - AluSx SINE Alu -17 295 1 1964 120 10 33 chr5 72214134 72214475 -127415675 + AluSc SINE Alu 1 309 0 207 209 0 0 chr5 72214617 72214660 -127415490 + A-rich Low_complexity Low_complexity 2 44 0 198 204 0 41 chr5 72214975 72215024 -127415126 - L2 LINE L2 -73 3199 3153 458 263 125 13 chr5 72215226 72215378 -127414772 - MER102a DNA MER1_type 0 330 162 854 214 62 19 chr5 72215392 72215602 -127414548 - AluJb SINE Alu -23 289 71 1017 126 0 50 chr5 72215607 72215766 -127414384 - AluJb SINE Alu -161 151 1 225 0 0 0 chr5 72215768 72215793 -127414357 + (T)n Simple_repeat Simple_repeat 1 25 0 2241 107 0 3 chr5 72215839 72216137 -127414013 - AluSg SINE Alu -13 297 1 568 244 7 7 chr5 72216137 72216272 -127413878 - AluJo SINE Alu -174 138 4 2394 83 0 3 chr5 72217037 72217339 -127412811 - AluSg SINE Alu -9 301 1 1403 93 10 5 chr5 72217339 72217533 -127412617 - AluSp SINE Alu -9 304 110 1598 97 14 0 chr5 72217533 72217740 -127412410 - AluSg/x SINE Alu -11 301 92 1006 119 126 0 chr5 72217749 72217900 -127412250 - AluSp SINE Alu -143 170 1 405 0 0 0 chr5 72218287 72218332 -127411818 + (TG)n Simple_repeat Simple_repeat 2 46 0 1016 130 74 0 chr5 72218357 72218519 -127411631 - AluSg/x SINE Alu -1 311 138 1611 159 64 61 chr5 72218609 72218955 -127411195 + L1MB7 LINE L1 5688 6034 -150 2128 107 14 7 chr5 72218956 72219247 -127410903 - AluSx SINE Alu -3 309 17 211 161 16 16 chr5 72219664 72219726 -127410424 + G-rich Low_complexity Low_complexity 2 63 0 238 239 0 0 chr5 72219761 72219807 -127410343 + G-rich Low_complexity Low_complexity 1 46 0 1318 122 16 63 chr5 72220130 72220299 -127409851 - L1MA8 LINE L1 -6 6285 6130 2360 84 0 0 chr5 72220299 72220597 -127409553 - AluY SINE Alu -13 298 1 1318 122 16 63 chr5 72220597 72220682 -127409468 - L1MA8 LINE L1 -161 6130 6043 256 81 0 0 chr5 72220720 72220757 -127409393 - L1MA8 LINE L1 -234 6057 6021 874 158 0 0 chr5 72220818 72220951 -127409199 - FLAM_C SINE Alu 0 133 1 2096 134 10 0 chr5 72220991 72221298 -127408852 + AluSq SINE Alu 1 310 -3 2287 106 6 3 chr5 72221301 72221613 -127408537 + AluSq SINE Alu 1 313 0 281 175 48 0 chr5 72221806 72221869 -127408281 - L1MB7 LINE L1 -5 6179 6114 181 140 0 40 chr5 72222365 72222415 -127407735 + (TTAA)n Simple_repeat Simple_repeat 1 48 0 381 64 0 0 chr5 72222446 72222493 -127407657 + Alu SINE Alu 2 48 -255 243 241 51 66 chr5 72222589 72222726 -127407424 + L1MC4 LINE L1 7864 7998 -44 1006 126 25 0 chr5 72222739 72222898 -127407252 - L1MA3 LINE L1 0 6305 6143 1622 205 3 3 chr5 72222898 72223205 -127406945 - AluJo SINE Alu -5 307 1 1644 150 45 21 chr5 72223369 72223656 -127406494 - AluJb SINE Alu -18 294 1 996 197 78 0 chr5 72223701 72223894 -127406256 + MER3 DNA MER1_type 2 209 0 1648 167 7 33 chr5 72224076 72224382 -127405768 + AluJb SINE Alu 1 298 -14 629 201 7 56 chr5 72224385 72224529 -127405621 + FLAM_A SINE Alu 1 137 -5 826 155 0 61 chr5 72224571 72224719 -127405431 + FLAM_C SINE Alu 5 143 0 26 0 0 0 chr5 72225398 72225424 -127404726 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr5 72226631 72226661 -127403489 + AT_rich Low_complexity Low_complexity 1 30 0 1056 179 63 9 chr5 72226862 72227085 -127403065 + MER46A DNA MER2_type 2 236 0 481 261 144 20 chr5 72227117 72227190 -127402960 - MIR SINE MIR -30 232 169 1961 110 68 4 chr5 72227190 72227471 -127402679 - AluSx SINE Alu -13 299 1 1598 169 24 10 chr5 72227471 72227761 -127402389 - AluJo SINE Alu -18 294 1 481 261 144 20 chr5 72227761 72227881 -127402269 - MIR SINE MIR -92 170 14 625 160 170 0 chr5 72227962 72228068 -127402082 - FLAM_C SINE Alu -18 125 2 221 256 61 0 chr5 72228161 72228243 -127401907 + MIR SINE MIR 144 230 -32 26 64 0 0 chr5 72228449 72228496 -127401654 + AT_rich Low_complexity Low_complexity 1 47 0 2209 95 14 0 chr5 72228498 72228783 -127401367 + AluY SINE Alu 1 289 -22 566 285 63 14 chr5 72228846 72229053 -127401097 - MIR SINE MIR -12 250 34 26 64 0 0 chr5 72229401 72229448 -127400702 + AT_rich Low_complexity Low_complexity 1 47 0 1748 156 35 7 chr5 72229526 72229809 -127400341 + AluJo SINE Alu 1 291 -21 484 214 26 51 chr5 72230243 72230360 -127399790 - FLAM_A SINE Alu -17 125 12 673 193 30 0 chr5 72230405 72230540 -127399610 - FRAM SINE Alu -22 154 16 2021 131 3 0 chr5 72230994 72231291 -127398859 + AluJo SINE Alu 1 298 -14 477 170 0 0 chr5 72231310 72231404 -127398746 + L1MB2 LINE L1 6078 6171 0 23 54 0 0 chr5 72231635 72231672 -127398478 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 72231855 72231876 -127398274 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 72232221 72232249 -127397901 + AT_rich Low_complexity Low_complexity 1 28 0 1958 141 3 10 chr5 72232647 72232952 -127397198 + AluSx SINE Alu 1 303 -9 2462 62 0 23 chr5 72232959 72233264 -127396886 + AluY SINE Alu 1 298 -13 403 181 162 19 chr5 72234153 72234258 -127395892 + L2 LINE L2 3187 3306 -7 2145 100 7 3 chr5 72234521 72234812 -127395338 - AluSx SINE Alu -16 296 5 258 91 91 0 chr5 72235005 72235049 -127395101 - L1ME3A LINE L1 -14 6156 6109 1990 149 10 0 chr5 72235087 72235383 -127394767 - AluJb SINE Alu -13 299 1 2097 126 17 0 chr5 72235515 72235816 -127394334 + AluSx SINE Alu 1 306 -6 2136 112 3 3 chr5 72236041 72236337 -127393813 + AluSp SINE Alu 12 307 -6 353 229 0 0 chr5 72236337 72236407 -127393743 + L3 LINE CR1 335 404 -1173 247 320 8 40 chr5 72236597 72236722 -127393428 + L3 LINE CR1 674 794 -783 2440 76 0 7 chr5 72236847 72237150 -127393000 + AluSc SINE Alu 1 301 -8 963 187 158 52 chr5 72237266 72237357 -127392793 - MER2 DNA MER2_type 0 344 264 1394 219 29 16 chr5 72237357 72237663 -127392487 + AluJb SINE Alu 1 310 -2 963 187 158 52 chr5 72237663 72237755 -127392395 - MER2 DNA MER2_type -80 264 183 2153 126 3 7 chr5 72237755 72238056 -127392094 + AluSx SINE Alu 3 302 -10 963 187 158 52 chr5 72238056 72238181 -127391969 - MER2 DNA MER2_type -161 183 2 2230 118 0 3 chr5 72238223 72238520 -127391630 - AluSx SINE Alu -16 296 1 2452 8 0 0 chr5 72238589 72238847 -127391303 - AluYa5 SINE Alu -19 292 35 336 288 6 92 chr5 72239003 72239051 -127391099 + L3 LINE CR1 1124 1175 -402 2313 98 17 0 chr5 72239051 72239347 -127390803 + AluSc SINE Alu 1 301 -8 336 288 6 92 chr5 72239347 72239461 -127390689 + L3 LINE CR1 1175 1272 -305 202 250 58 0 chr5 72239633 72239685 -127390465 + L3 LINE CR1 1518 1572 -5 791 159 0 36 chr5 72240026 72240164 -127389986 + FLAM_C SINE Alu 1 133 0 2447 64 7 0 chr5 72240334 72240629 -127389521 + AluY SINE Alu 1 297 -14 239 183 0 50 chr5 72240890 72240950 -127389200 + L2 LINE L2 3008 3064 -249 372 233 203 8 chr5 72241299 72241432 -127388718 + MER5A DNA MER1_type 31 189 0 289 313 26 0 chr5 72241902 72242017 -127388133 + MIR SINE MIR 124 241 -21 2038 104 32 0 chr5 72242246 72242526 -127387624 + AluSx SINE Alu 1 289 -23 189 171 0 0 chr5 72243952 72243987 -127386163 + CT-rich Low_complexity Low_complexity 1 35 0 3410 116 17 12 chr5 72245649 72246166 -127383984 - L1MB7 LINE L1 -15 6169 5650 205 189 378 0 chr5 72246309 72246399 -127383751 - L2 LINE L2 0 3313 3190 327 321 36 42 chr5 72246897 72247065 -127383085 + MIR SINE MIR 18 184 -78 400 140 0 0 chr5 72247066 72247123 -127383027 + L1M4 LINE L1 2703 2759 -3387 301 267 40 0 chr5 72247131 72247206 -127382944 + L2 LINE L2 3236 3313 0 1959 150 10 0 chr5 72247782 72248088 -127382062 - AluSx SINE Alu -2 310 2 2401 95 3 0 chr5 72248126 72248432 -127381718 - AluSx SINE Alu -5 307 1 2246 92 3 0 chr5 72248435 72248741 -127381409 - AluSp SINE Alu 0 307 1 580 294 57 6 chr5 72248766 72248943 -127381207 - MIR SINE MIR -74 188 3 337 260 47 39 chr5 72248974 72249101 -127381049 + L1ME3A LINE L1 6039 6166 -4 963 147 13 7 chr5 72249112 72249262 -127380888 - AluJ SINE Alu -44 268 118 2151 100 3 10 chr5 72249283 72249573 -127380577 + AluSx SINE Alu 1 288 -24 21 36 0 0 chr5 72249573 72249601 -127380549 + AT_rich Low_complexity Low_complexity 1 28 0 816 145 0 0 chr5 72249602 72249719 -127380431 - AluJ SINE Alu -195 117 1 2323 98 0 25 chr5 72250324 72250642 -127379508 - AluSx SINE Alu -2 310 1 718 279 56 62 chr5 72250796 72251154 -127378996 - L2 LINE L2 0 3313 2958 1718 139 16 50 chr5 72251279 72251596 -127378554 - AluJo SINE Alu -6 306 1 241 136 15 76 chr5 72251973 72252039 -127378111 + L1ME4a LINE L1 6060 6121 0 2287 119 0 3 chr5 72252042 72252353 -127377797 - AluSx SINE Alu -2 310 1 399 189 107 25 chr5 72252385 72252413 -127377737 - L1MC4 LINE L1 -8 8034 8010 1761 173 10 7 chr5 72252413 72252720 -127377430 + AluJo SINE Alu 1 308 -4 399 189 107 25 chr5 72252720 72252813 -127377337 - L1MC4 LINE L1 -32 8010 7903 24 32 0 0 chr5 72252834 72252865 -127377285 + AT_rich Low_complexity Low_complexity 1 31 0 1079 101 0 0 chr5 72252884 72253023 -127377127 - AluJo SINE Alu -173 139 1 1521 273 74 35 chr5 72253065 72253339 -127376811 - L1MC4 LINE L1 -132 7910 7648 1722 142 0 29 chr5 72253339 72253613 -127376537 - AluSx SINE Alu -12 300 35 1521 273 74 35 chr5 72253613 72254044 -127376106 - L1MC4 LINE L1 -394 7648 7178 2384 59 7 3 chr5 72254121 72254409 -127375741 + AluSc SINE Alu 1 289 -20 1568 169 131 4 chr5 72254612 72254879 -127375271 - AluJo SINE Alu 0 302 2 274 115 211 0 chr5 72254927 72254974 -127375176 + MER1A DNA MER1_type 1 58 -469 2475 151 31 2 chr5 72254974 72255434 -127374716 + MER1A DNA MER1_type 4 528 -1 2289 94 0 7 chr5 72255484 72255792 -127374358 + AluY SINE Alu 1 306 -5 1543 82 77 0 chr5 72255838 72256046 -127374104 - AluSg/x SINE Alu -4 306 83 181 102 51 41 chr5 72256539 72256637 -127373513 + (CACAA)n Simple_repeat Simple_repeat 2 100 0 21 0 0 0 chr5 72306732 72306753 -127323397 + AT_rich Low_complexity Low_complexity 1 21 0 288 282 90 0 chr5 72309390 72309468 -127320682 + L2 LINE L2 3186 3270 -2 438 318 17 0 chr5 72311286 72311462 -127318688 + L1MEc LINE L1 102 280 -6116 546 213 20 33 chr5 72311785 72311935 -127318215 + MER105 DNA DNA 2 149 -55 249 203 119 0 chr5 72311982 72312041 -127318109 + MER105 DNA DNA 138 203 -1 243 287 0 90 chr5 72312042 72312155 -127317995 + L1MEc LINE L1 633 724 -5672 1560 185 23 32 chr5 72312155 72312463 -127317687 - AluJo SINE Alu -7 305 1 243 287 0 90 chr5 72312463 72312537 -127317613 + L1MEc LINE L1 724 803 -5593 2196 100 10 0 chr5 72312546 72312836 -127317314 - AluY SINE Alu -18 293 1 2101 130 10 3 chr5 72312866 72313159 -127316991 + AluSx SINE Alu 1 295 -17 2183 121 0 13 chr5 72313160 72313296 -127316854 + AluSx SINE Alu 1 137 -175 2321 84 0 36 chr5 72313296 72313604 -127316546 + AluSc SINE Alu 1 297 -12 2183 121 0 13 chr5 72313604 72313774 -127316376 + AluSx SINE Alu 137 303 -9 23 0 0 0 chr5 72313787 72313810 -127316340 + AT_rich Low_complexity Low_complexity 1 23 0 2543 60 0 0 chr5 72313870 72314170 -127315980 + AluY SINE Alu 3 302 -9 1193 255 149 35 chr5 72314189 72314373 -127315777 + L1MEc LINE L1 776 938 -5458 2312 75 4 0 chr5 72314373 72314683 -127315467 + AluY SINE Alu 1 311 0 1193 255 149 35 chr5 72314683 72315393 -127314757 + L1MEc LINE L1 938 1858 -4538 2305 96 6 6 chr5 72315432 72315745 -127314405 - AluSp SINE Alu 0 313 1 1734 184 13 7 chr5 72315796 72316106 -127314044 + AluJb SINE Alu 1 312 0 22 0 0 0 chr5 72316132 72316154 -127313996 + AT_rich Low_complexity Low_complexity 1 22 0 453 111 0 0 chr5 72316154 72316217 -127313933 - HY3 scRNA scRNA -37 64 2 1660 191 43 0 chr5 72316275 72316574 -127313576 + AluJo SINE Alu 1 312 0 1891 137 0 38 chr5 72316577 72316720 -127313430 + AluSx SINE Alu 1 148 -164 2479 54 0 3 chr5 72316720 72317015 -127313135 + AluY SINE Alu 1 294 -17 1891 137 0 38 chr5 72317015 72317185 -127312965 + AluSx SINE Alu 148 302 -10 428 154 33 66 chr5 72317315 72317406 -127312744 + MER21A LTR ERV1 486 573 -358 1560 153 15 98 chr5 72318315 72318642 -127311508 + AluJb SINE Alu 1 300 -12 22 35 0 0 chr5 72318764 72318793 -127311357 + AT_rich Low_complexity Low_complexity 1 29 0 1694 152 10 33 chr5 72318798 72318863 -127311287 + AluJb SINE Alu 1 66 -246 2018 146 3 0 chr5 72318863 72319158 -127310992 - AluSx SINE Alu -16 296 1 1694 152 10 33 chr5 72319158 72319395 -127310755 + AluJb SINE Alu 66 296 -16 665 199 62 97 chr5 72319395 72319444 -127310706 + L1MEc LINE L1 3030 3079 -3136 2400 65 3 3 chr5 72319444 72319738 -127310412 + AluY SINE Alu 1 294 -17 665 199 62 97 chr5 72319738 72319818 -127310332 + L1MEc LINE L1 3079 3160 -3055 1978 35 0 4 chr5 72319818 72320046 -127310104 + L1PA4 LINE L1 5929 6155 0 665 199 62 97 chr5 72320046 72320151 -127309999 + L1MEc LINE L1 3160 3254 -2961 2371 82 3 0 chr5 72320151 72320454 -127309696 + AluY SINE Alu 1 304 -7 665 199 62 97 chr5 72320454 72320538 -127309612 + L1MEc LINE L1 3254 3339 -2876 1770 137 42 7 chr5 72320543 72320828 -127309322 + AluJb SINE Alu 12 306 -6 1072 249 79 10 chr5 72320829 72321222 -127308928 + L1MEc LINE L1 3510 3929 -2286 2305 87 0 3 chr5 72321248 72321536 -127308614 - AluSx SINE Alu -25 287 1 2224 112 3 7 chr5 72322271 72322576 -127307574 + AluSx SINE Alu 1 304 -8 249 146 0 0 chr5 72323688 72323736 -127306414 + (TG)n Simple_repeat Simple_repeat 1 48 0 31 0 0 0 chr5 72324905 72324936 -127305214 + AT_rich Low_complexity Low_complexity 1 31 0 214 238 0 75 chr5 72325725 72325805 -127304345 - MIR SINE MIR -64 198 125 232 354 67 37 chr5 72326561 72326725 -127303425 + MIR3 SINE MIR 19 187 -21 405 0 0 0 chr5 72327738 72327783 -127302367 + (CA)n Simple_repeat Simple_repeat 2 46 0 2356 61 0 61 chr5 72327803 72328132 -127302018 + AluY SINE Alu 1 309 -2 482 288 170 9 chr5 72328331 72328543 -127301607 + MIR SINE MIR 17 262 0 1648 155 4 4 chr5 72328686 72328963 -127301187 - AluSx SINE Alu -20 292 16 2324 90 0 10 chr5 72329055 72329366 -127300784 - AluY SINE Alu -3 308 1 25 0 0 0 chr5 72329593 72329618 -127300532 + AT_rich Low_complexity Low_complexity 1 25 0 192 77 0 0 chr5 72329947 72329973 -127300177 + (TTCC)n Simple_repeat Simple_repeat 4 29 0 2026 151 10 0 chr5 72329980 72330279 -127299871 - AluSx SINE Alu -10 302 1 1167 212 93 11 chr5 72330701 72330970 -127299180 - AluJo SINE Alu -10 292 2 1850 136 7 20 chr5 72331039 72331333 -127298817 - AluSx SINE Alu -22 290 1 1894 126 7 32 chr5 72331538 72331847 -127298303 + AluJb SINE Alu 1 301 -11 300 322 64 81 chr5 72332252 72332687 -127297463 - L1M2 LINE L1 -6241 608 181 26 0 0 0 chr5 72333078 72333104 -127297046 + AT_rich Low_complexity Low_complexity 1 26 0 245 266 75 0 chr5 72333277 72333371 -127296779 + MIR SINE MIR 106 206 -56 2145 105 30 7 chr5 72333933 72334238 -127295912 - AluSx SINE Alu 0 312 1 41 21 0 0 chr5 72334819 72334867 -127295283 + AT_rich Low_complexity Low_complexity 1 48 0 2155 114 7 0 chr5 72335855 72336144 -127294006 + AluSx SINE Alu 1 291 -21 719 231 62 87 chr5 72336284 72336427 -127293723 + MIR SINE MIR 3 148 -114 1281 189 59 0 chr5 72336427 72336649 -127293501 + MER46A DNA MER2_type 1 235 -1 719 231 62 87 chr5 72336649 72336723 -127293427 + MIR SINE MIR 148 216 -46 2400 91 0 0 chr5 72336723 72337030 -127293120 + AluSx SINE Alu 1 307 -5 719 231 62 87 chr5 72337030 72337071 -127293079 + MIR SINE MIR 216 256 -6 221 300 133 0 chr5 72337119 72337209 -127292941 - MIR SINE MIR -38 224 123 607 156 56 0 chr5 72337250 72337340 -127292810 + AluSg/x SINE Alu 191 285 -24 1703 181 19 13 chr5 72337597 72337906 -127292244 - AluJb SINE Alu -1 311 1 1542 171 4 36 chr5 72337979 72338259 -127291891 + AluJo SINE Alu 31 301 -11 2229 118 0 0 chr5 72338585 72338890 -127291260 - AluSx SINE Alu -7 305 1 1928 154 0 20 chr5 72339099 72339398 -127290752 + AluJb SINE Alu 1 293 -19 1732 128 80 11 chr5 72339478 72339752 -127290398 + AluJo SINE Alu 1 293 -19 1705 163 13 40 chr5 72340171 72340472 -127289678 + AluJb SINE Alu 5 297 -15 23 54 0 0 chr5 72340636 72340673 -127289477 + AT_rich Low_complexity Low_complexity 1 37 0 1738 185 3 7 chr5 72340838 72341130 -127289020 + AluJo SINE Alu 1 291 -21 22 0 0 0 chr5 72341157 72341179 -127288971 + AT_rich Low_complexity Low_complexity 1 22 0 1649 156 7 75 chr5 72341179 72341332 -127288818 - AluJb SINE Alu -25 287 164 2448 84 0 0 chr5 72341332 72341641 -127288509 - AluSc SINE Alu 0 309 1 1649 156 7 75 chr5 72341641 72341795 -127288355 - AluJb SINE Alu -148 164 1 1425 181 73 8 chr5 72341897 72342183 -127287967 - AluJo SINE Alu 0 307 5 2247 97 0 0 chr5 72342225 72342515 -127287635 + AluSg SINE Alu 1 290 -20 21 0 0 0 chr5 72344299 72344320 -127285830 + AT_rich Low_complexity Low_complexity 1 21 0 908 149 0 15 chr5 72344334 72344468 -127285682 + FLAM_C SINE Alu 2 133 0 1492 167 24 65 chr5 72344482 72344646 -127285504 - AluJo SINE Alu -30 282 134 2406 91 0 0 chr5 72344646 72344943 -127285207 - AluSq SINE Alu -16 297 1 1492 167 24 65 chr5 72344943 72345072 -127285078 - AluJo SINE Alu -178 134 1 23 0 0 0 chr5 72345075 72345098 -127285052 + AT_rich Low_complexity Low_complexity 1 23 0 2495 72 0 0 chr5 72345227 72345531 -127284619 - AluSq SINE Alu -9 304 1 2187 109 0 3 chr5 72345771 72346065 -127284085 - AluSx SINE Alu -19 293 1 1696 91 0 13 chr5 72346238 72346470 -127283680 - AluSx SINE Alu -11 299 71 * 2457 80 3 0 chr5 72346468 72346767 -127283383 - AluSp SINE Alu -13 300 1 542 161 11 11 chr5 72346767 72346854 -127283296 - AluSx SINE Alu -224 88 2 1936 133 7 10 chr5 72347215 72347517 -127282633 - AluSq SINE Alu -12 301 1 3585 124 7 36 chr5 72347821 72348449 -127281701 + MER4B LTR ERV1 1 779 0 1131 117 25 6 chr5 72348449 72348611 -127281539 + LTR29 LTR ERV1 458 622 0 3361 134 91 0 chr5 72348711 72349248 -127280902 - MER72 LTR ERV1 0 722 137 364 114 14 43 chr5 72349404 72349474 -127280676 - MER72 LTR ERV1 -654 68 1 297 286 157 21 chr5 72349474 72349612 -127280538 + MER76 LTR ERV 500 656 -32 263 152 76 25 chr5 72349991 72350070 -127280080 + FRAM SINE Alu 63 145 -21 209 161 16 65 chr5 72350480 72350522 -127279628 + CT-rich Low_complexity Low_complexity 2 42 -18 2164 104 0 20 chr5 72350522 72350820 -127279330 - AluSx SINE Alu -20 292 1 209 161 16 65 chr5 72350820 72350839 -127279311 + CT-rich Low_complexity Low_complexity 42 60 0 1199 259 99 25 chr5 72350850 72351164 -127278986 - MLT1K LTR MaLR -12 576 220 2418 95 0 0 chr5 72351164 72351469 -127278681 - AluSg SINE Alu -5 305 1 1199 259 99 25 chr5 72351469 72351590 -127278560 - MLT1K LTR MaLR -368 220 109 305 254 124 59 chr5 72352336 72352505 -127277645 + L2 LINE L2 2813 2992 -280 292 215 165 0 chr5 72352548 72352627 -127277523 - MIR SINE MIR -11 251 160 290 298 53 0 chr5 72352634 72352678 -127277472 - MIR SINE MIR -2 260 220 2589 53 0 0 chr5 72352678 72352979 -127277171 - AluY SINE Alu -10 301 1 290 298 53 0 chr5 72352979 72353028 -127277122 - MIR SINE MIR -42 220 162 2194 85 7 0 chr5 72353028 72353336 -127276814 - AluSq SINE Alu 0 310 1 517 265 102 41 chr5 72353336 72353581 -127276569 - HAL1 LINE L1 -1479 1028 769 450 355 54 9 chr5 72353695 72354030 -127276120 - HAL1 LINE L1 -1996 511 162 2294 113 0 0 chr5 72354034 72354336 -127275814 - AluSx SINE Alu -10 302 1 1060 227 60 0 chr5 72354878 72355178 -127274972 - L1 LINE L1 -783 5363 5046 894 204 23 0 chr5 72355166 72355342 -127274808 - L1MB4 LINE L1 -43 6137 5958 * 350 250 83 0 chr5 72355342 72355426 -127274724 - 5S rRNA rRNA -30 91 1 351 188 12 13 chr5 72355427 72355511 -127274639 - L1MB4 LINE L1 -206 5960 5883 24 0 0 0 chr5 72355590 72355614 -127274536 + AT_rich Low_complexity Low_complexity 1 24 0 1235 183 57 17 chr5 72355615 72355845 -127274305 - AluJo SINE Alu -28 284 46 747 281 118 37 chr5 72355909 72356586 -127273564 + L1M4 LINE L1 4598 5329 -817 1088 167 0 17 chr5 72356672 72356846 -127273304 - AluJb SINE Alu -22 290 120 1817 138 65 0 chr5 72357060 72357336 -127272814 - AluSx SINE Alu -18 294 1 29 0 0 0 chr5 72357516 72357545 -127272605 + AT_rich Low_complexity Low_complexity 1 29 0 2470 82 0 0 chr5 72358299 72358602 -127271548 + AluY SINE Alu 1 303 -8 1099 165 0 0 chr5 72358779 72358943 -127271207 - AluJb SINE Alu -9 303 140 2199 88 0 3 chr5 72358944 72359227 -127270923 - AluSx SINE Alu -30 282 1 249 214 71 0 chr5 72359363 72359433 -127270717 - L1 LINE L1 -1318 4828 4754 22 0 0 0 chr5 72359794 72359816 -127270334 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 72360014 72360039 -127270111 + AT_rich Low_complexity Low_complexity 1 25 0 1345 185 3 77 chr5 72360123 72360300 -127269850 - AluJo SINE Alu -12 300 156 2391 75 7 0 chr5 72360300 72360594 -127269556 - AluY SINE Alu -15 296 1 1345 185 3 77 chr5 72360594 72360740 -127269410 - AluJo SINE Alu -156 156 1 2416 97 0 0 chr5 72360757 72361065 -127269085 - AluSx SINE Alu -1 311 4 1904 167 0 3 chr5 72361070 72361369 -127268781 - AluSx SINE Alu -14 298 1 1536 115 0 5 chr5 72361437 72361655 -127268495 - AluSg/x SINE Alu -5 307 91 1932 152 0 16 chr5 72361679 72361989 -127268161 + AluSx SINE Alu 1 305 -7 247 294 89 64 chr5 72362039 72362274 -127267876 - L1MB4 LINE L1 -302 5819 5579 2186 112 3 6 chr5 72362657 72362969 -127267181 - AluSq SINE Alu -2 311 1 1916 155 10 0 chr5 72363163 72363454 -127266696 + AluJo SINE Alu 4 297 -15 1922 140 11 3 chr5 72363529 72363815 -127266335 - AluSx SINE Alu -24 288 1 189 0 0 0 chr5 72364015 72364036 -127266114 + (A)n Simple_repeat Simple_repeat 1 21 0 2151 104 44 0 chr5 72364517 72364814 -127265336 - AluSx SINE Alu 0 312 3 219 36 0 0 chr5 72365205 72365233 -127264917 + (CATA)n Simple_repeat Simple_repeat 4 31 0 835 124 0 0 chr5 72365236 72365357 -127264793 - AluSx SINE Alu -19 293 173 515 76 0 0 chr5 72365357 72365423 -127264727 + Alu SINE Alu 235 300 -12 1253 125 0 0 chr5 72365459 72365627 -127264523 - AluSx SINE Alu -144 168 1 1849 142 10 36 chr5 72366025 72366327 -127263823 + AluJo SINE Alu 1 294 -18 2487 81 0 3 chr5 72366331 72366639 -127263511 + AluY SINE Alu 1 307 -4 2092 112 29 0 chr5 72367341 72367648 -127262502 - AluSq SINE Alu 0 315 1 24 32 0 0 chr5 72367758 72367789 -127262361 + AT_rich Low_complexity Low_complexity 1 31 0 848 178 25 43 chr5 72368058 72368221 -127261929 + FRAM SINE Alu 1 158 -18 833 150 8 16 chr5 72368835 72368962 -127261188 + FLAM_C SINE Alu 1 126 -7 189 0 0 0 chr5 72369099 72369120 -127261030 + (TA)n Simple_repeat Simple_repeat 2 22 0 378 0 0 0 chr5 72369125 72369167 -127260983 + (CA)n Simple_repeat Simple_repeat 2 43 0 2045 130 0 7 chr5 72369172 72369464 -127260686 - AluJb SINE Alu -22 290 1 2122 133 7 0 chr5 72370297 72370605 -127259545 - AluSx SINE Alu -2 310 1 1307 197 80 8 chr5 72370627 72370926 -127259224 - AluJb SINE Alu 0 318 1 22 35 0 0 chr5 72371640 72371669 -127258481 + AT_rich Low_complexity Low_complexity 1 29 0 1645 140 72 11 chr5 72373694 72373798 -127256352 + AluJb SINE Alu 18 114 -198 245 87 0 22 chr5 72373798 72373844 -127256306 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 1645 140 72 11 chr5 72373844 72374003 -127256147 + AluJb SINE Alu 114 297 -15 21 36 0 0 chr5 72374442 72374470 -127255680 + AT_rich Low_complexity Low_complexity 1 28 0 2022 143 0 25 chr5 72375114 72375429 -127254721 + AluJb SINE Alu 1 307 -5 2146 100 16 19 chr5 72376050 72376359 -127253791 - AluSg SINE Alu -1 309 2 231 301 143 64 chr5 72376886 72377278 -127252872 - L1MC/D LINE L1 -1923 5885 5463 1341 142 78 0 chr5 72377709 72377927 -127252223 + MER46A DNA MER2_type 1 235 -1 1121 164 78 13 chr5 72377972 72378203 -127251947 - L1MB3 LINE L1 -19 6164 5919 237 271 178 26 chr5 72378851 72379120 -127251030 - L1ME4a LINE L1 -73 6048 5739 23 54 0 0 chr5 72379245 72379282 -127250868 + AT_rich Low_complexity Low_complexity 1 37 0 675 201 14 43 chr5 72379438 72379577 -127250573 + FLAM_A SINE Alu 7 141 -1 1003 105 0 15 chr5 72380133 72380266 -127249884 + FLAM_C SINE Alu 1 131 -2 1997 138 3 16 chr5 72380792 72381104 -127249046 - AluJb SINE Alu -4 308 1 2031 119 63 0 chr5 72381187 72381472 -127248678 - AluSq SINE Alu -10 303 1 6194 137 26 6 chr5 72381536 72382644 -127247506 - L1MA4 LINE L1 -5 6295 5167 523 315 109 22 chr5 72382989 72383256 -127246894 - L2 LINE L2 0 3313 3024 2338 88 7 0 chr5 72383259 72383555 -127246595 + AluSp SINE Alu 1 298 -15 2248 110 3 0 chr5 72383644 72383944 -127246206 - AluSp SINE Alu -12 301 1 25 0 0 0 chr5 72384855 72384880 -127245270 + AT_rich Low_complexity Low_complexity 1 25 0 2062 119 10 0 chr5 72385683 72385976 -127244174 - AluSq SINE Alu -17 296 1 6193 61 10 55 chr5 72386964 72388570 -127241580 - SVA Other Other -520 1386 233 636 99 0 168 chr5 72388644 72388657 -127241493 - L1MB3 LINE L1 0 6183 6169 2398 97 3 0 chr5 72388657 72388965 -127241185 + AluSx SINE Alu 1 309 -3 636 99 0 168 chr5 72388965 72389011 -127241139 - L1MB3 LINE L1 -14 6169 6117 2138 135 7 0 chr5 72389011 72389314 -127240836 - AluSx SINE Alu -7 305 1 636 99 0 168 chr5 72389314 72389414 -127240736 - L1MB3 LINE L1 -66 6117 6050 880 129 0 0 chr5 72389429 72389545 -127240605 - FLAM_C SINE Alu -13 120 5 2866 186 28 33 chr5 72389701 72390137 -127240013 - L1MB3 LINE L1 -125 6058 5624 2193 103 16 29 chr5 72390137 72390449 -127239701 - AluSq SINE Alu -5 308 1 2866 186 28 33 chr5 72390449 72390624 -127239526 - L1MB3 LINE L1 -559 5624 5450 2136 108 7 0 chr5 72391441 72391728 -127238422 + AluSg SINE Alu 3 291 -19 1453 209 7 4 chr5 72391737 72392010 -127238140 + AluJo SINE Alu 1 274 -38 1855 190 0 27 chr5 72392024 72392397 -127237753 + L1MB8 LINE L1 5791 6153 -25 1950 160 0 28 chr5 72392552 72392871 -127237279 - AluSx SINE Alu -2 310 1 782 176 8 0 chr5 72392888 72393007 -127237143 - FLAM_A SINE Alu -10 123 4 1869 163 14 0 chr5 72393123 72393411 -127236739 + AluJb SINE Alu 1 292 -20 289 202 83 12 chr5 72393514 72393598 -127236552 + AluJb SINE Alu 211 300 -2 207 0 0 0 chr5 72393828 72393851 -127236299 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2143 96 0 0 chr5 72393865 72394136 -127236014 - AluSx SINE Alu -41 271 1 295 398 10 10 chr5 72394190 72394293 -127235857 + L2 LINE L2 3117 3219 -53 4521 183 31 13 chr5 72395094 72395776 -127234374 - L1MB7 LINE L1 0 6995 6327 1588 196 13 25 chr5 72395776 72396092 -127234058 - AluJo SINE Alu 0 312 1 4521 183 31 13 chr5 72396092 72396826 -127233324 - L1MB7 LINE L1 -668 6327 5550 1193 83 6 0 chr5 72396826 72396983 -127233167 - AluYa5 SINE Alu -8 303 146 2254 84 3 0 chr5 72396984 72397270 -127232880 - AluSp SINE Alu -26 287 1 849 154 178 0 chr5 72397270 72397439 -127232711 - L1MB7 LINE L1 -1763 5194 4996 244 171 0 0 chr5 72397439 72397473 -127232677 - MLT1C LTR MaLR 0 467 434 387 118 0 0 chr5 72397473 72397524 -127232626 - Tigger5 DNA MER2_type 0 2323 2273 2341 96 0 10 chr5 72397532 72397834 -127232316 - AluSx SINE Alu -13 299 1 1677 232 36 19 chr5 72397869 72398334 -127231816 - MLT1C LTR MaLR -33 593 8 741 201 21 0 chr5 72398341 72398485 -127231665 - L1MB7 LINE L1 -1961 4996 4850 1491 154 54 29 chr5 72398887 72399167 -127230983 + AluJo SINE Alu 3 289 -23 2282 97 0 31 chr5 72399176 72399496 -127230654 + AluSg SINE Alu 1 310 0 1311 223 107 0 chr5 72400276 72400613 -127229537 - L1MB7 LINE L1 -2098 4859 4487 844 261 105 7 chr5 72400656 72400932 -127229218 - L1MB7 LINE L1 -6543 316 14 186 43 0 0 chr5 72402601 72402624 -127227526 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 301 189 0 0 chr5 72402659 72402712 -127227438 - AluSp/q SINE Alu -4 299 247 615 124 196 0 chr5 72402995 72403092 -127227058 + FLAM_C SINE Alu 2 117 -16 915 150 26 7 chr5 72403122 72403275 -127226875 - Tigger2 DNA MER2_type -57 2661 2506 229 61 0 212 chr5 72403376 72403413 -127226737 - Tigger2 DNA MER2_type -204 2514 2471 1690 189 23 3 chr5 72403413 72403715 -127226435 + AluJb SINE Alu 1 308 -4 1283 177 60 40 chr5 72403718 72404017 -127226133 + AluJb SINE Alu 1 305 -7 229 61 0 212 chr5 72404017 72404041 -127226109 - Tigger2 DNA MER2_type -249 2469 2463 1367 162 42 0 chr5 72404101 72404317 -127225833 - Tigger2 DNA MER2_type -1965 753 529 2588 46 10 3 chr5 72405011 72405318 -127224832 + AluY SINE Alu 1 309 -2 232 114 0 0 chr5 72405695 72405730 -127224420 - L1ME1 LINE L1 -12 6154 6120 1932 163 10 0 chr5 72405738 72406045 -127224105 - AluSx SINE Alu -2 310 1 782 176 8 0 chr5 72406062 72406181 -127223969 - FLAM_A SINE Alu -10 123 4 1869 163 14 0 chr5 72406297 72406585 -127223565 + AluJb SINE Alu 1 292 -20 289 202 83 12 chr5 72406688 72406772 -127223378 + AluJb SINE Alu 211 300 -2 207 0 0 0 chr5 72407002 72407025 -127223125 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2143 96 0 0 chr5 72407039 72407310 -127222840 - AluSx SINE Alu -41 271 1 295 398 10 10 chr5 72407364 72407467 -127222683 + L2 LINE L2 3117 3219 -53 4491 184 31 13 chr5 72408291 72408974 -127221176 - L1MB7 LINE L1 0 6995 6326 1623 197 13 22 chr5 72408974 72409289 -127220861 - AluJo SINE Alu 0 312 1 4491 184 31 13 chr5 72409289 72410022 -127220128 - L1MB7 LINE L1 -669 6326 5550 1193 83 6 0 chr5 72410022 72410179 -127219971 - AluYa5 SINE Alu -8 303 146 2254 84 3 0 chr5 72410180 72410466 -127219684 - AluSp SINE Alu -26 287 1 849 154 178 0 chr5 72410466 72410635 -127219515 - L1MB7 LINE L1 -1763 5194 4996 244 171 0 0 chr5 72410635 72410669 -127219481 - MLT1C LTR MaLR 0 467 434 387 118 0 0 chr5 72410669 72410720 -127219430 - Tigger5 DNA MER2_type 0 2323 2273 2355 93 0 10 chr5 72410728 72411030 -127219120 - AluSx SINE Alu -13 299 1 1674 238 36 19 chr5 72411065 72411530 -127218620 - MLT1C LTR MaLR -33 593 8 741 201 21 0 chr5 72411537 72411681 -127218469 - L1MB7 LINE L1 -1961 4996 4850 1491 154 54 29 chr5 72412083 72412363 -127217787 + AluJo SINE Alu 3 289 -23 2294 98 0 25 chr5 72412372 72412690 -127217460 + AluSg SINE Alu 1 310 0 1294 226 107 0 chr5 72413470 72413807 -127216343 - L1MB7 LINE L1 -2098 4859 4487 822 251 104 18 chr5 72413850 72414129 -127216021 - L1MB7 LINE L1 -6543 316 14 2229 112 0 0 chr5 72415857 72416151 -127213999 - AluSq SINE Alu -19 294 1 1888 153 3 3 chr5 72416179 72416466 -127213684 + AluJb SINE Alu 1 287 -25 252 100 0 0 chr5 72418018 72418058 -127212092 + (TC)n Simple_repeat Simple_repeat 1 40 0 272 175 193 18 chr5 72418060 72418117 -127212033 - Tigger2 DNA MER2_type -1 2717 2651 615 124 196 0 chr5 72418118 72418215 -127211935 + FLAM_C SINE Alu 2 117 -26 186 103 0 0 chr5 72418229 72418258 -127211892 + (TA)n Simple_repeat Simple_repeat 1 29 0 891 142 28 0 chr5 72418258 72418399 -127211751 - Tigger2 DNA MER2_type -68 2650 2506 229 61 0 212 chr5 72418500 72418537 -127211613 - Tigger2 DNA MER2_type -204 2514 2471 1690 189 23 3 chr5 72418537 72418839 -127211311 + AluJb SINE Alu 1 308 -4 1415 184 61 24 chr5 72418842 72419136 -127211014 + AluJb SINE Alu 1 305 -7 229 61 0 212 chr5 72419136 72419160 -127210990 - Tigger2 DNA MER2_type -249 2469 2463 1367 162 42 0 chr5 72419220 72419436 -127210714 - Tigger2 DNA MER2_type -1965 753 529 2609 55 0 3 chr5 72420129 72420439 -127209711 + AluY SINE Alu 1 309 -2 301 127 164 172 chr5 72420816 72420859 -127209291 - L1ME1 LINE L1 -12 6154 6112 1925 163 10 0 chr5 72420859 72421166 -127208984 - AluSx SINE Alu -2 310 1 301 127 164 172 chr5 72421166 72421256 -127208894 - L1ME1 LINE L1 -54 6112 6022 1003 144 30 0 chr5 72421376 72421543 -127208607 + AluJb SINE Alu 121 292 -20 227 328 66 8 chr5 72421550 72421672 -127208478 - L2 LINE L2 -412 2902 2774 1820 261 84 50 chr5 72421723 72421873 -127208277 - L1MC4 LINE L1 0 8042 7899 2230 115 3 6 chr5 72421873 72422186 -127207964 + AluSx SINE Alu 1 312 0 1820 261 84 50 chr5 72422186 72422383 -127207767 - L1MC4 LINE L1 -143 7899 7710 2150 123 0 23 chr5 72422383 72422684 -127207466 - AluSx SINE Alu -18 294 1 1820 261 84 50 chr5 72422684 72423187 -127206963 - L1MC4 LINE L1 -332 7710 7162 2092 92 11 28 chr5 72423200 72423515 -127206635 + AluSc SINE Alu 1 310 0 1480 147 0 25 chr5 72423532 72423770 -127206380 + AluJb SINE Alu 1 232 -80 1851 113 4 0 chr5 72424522 72424769 -127205381 + AluSx SINE Alu 35 282 -30 1307 160 6 123 chr5 72425515 72425635 -127204515 - AluJo SINE Alu -19 293 161 1939 136 31 0 chr5 72425635 72425921 -127204229 + AluSx SINE Alu 1 295 -17 1307 160 6 123 chr5 72425921 72426132 -127204018 - AluJo SINE Alu -151 161 1 2131 113 7 3 chr5 72426243 72426534 -127203616 - AluSx SINE Alu -18 294 3 286 74 37 0 chr5 72426601 72426655 -127203495 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 6128 78 25 29 chr5 72426658 72428422 -127201728 - SVA Other Other -555 1366 11 435 252 65 22 chr5 72429124 72429263 -127200887 + MIR SINE MIR 12 156 -106 180 0 0 0 chr5 72429263 72429283 -127200867 + (CAT)n Simple_repeat Simple_repeat 2 21 0 321 302 220 6 chr5 72429290 72429472 -127200678 + L2 LINE L2 2750 2970 -344 602 221 83 31 chr5 72429727 72430015 -127200135 - L1MC/D LINE L1 -748 5398 5154 271 213 31 71 chr5 72430013 72430140 -127200010 - L1MC5 LINE L1 -32 7929 7808 * 1419 132 29 70 chr5 72430356 72430599 -127199551 - MER46A DNA MER2_type -3 233 1 625 285 82 52 chr5 72430776 72430997 -127199153 - L1MC/D LINE L1 -1169 4977 4764 2324 97 3 7 chr5 72430997 72431307 -127198843 - AluSp SINE Alu -4 309 1 625 285 82 52 chr5 72431307 72432195 -127197955 - L1MC/D LINE L1 -1382 4764 3764 24 53 0 0 chr5 72432413 72432451 -127197699 + AT_rich Low_complexity Low_complexity 1 38 0 1741 156 7 14 chr5 72432794 72432942 -127197208 - AluJb SINE Alu -31 281 134 2182 68 0 0 chr5 72432942 72433206 -127196944 - AluY SINE Alu 0 311 48 1741 156 7 14 chr5 72433206 72433332 -127196818 - AluJb SINE Alu -178 134 9 2011 109 53 3 chr5 72433755 72434040 -127196110 + AluSx SINE Alu 1 299 -13 2499 84 0 0 chr5 72434045 72434356 -127195794 + AluSq SINE Alu 1 311 -2 2167 132 0 0 chr5 72434372 72434675 -127195475 + AluSx SINE Alu 1 303 -9 995 130 130 0 chr5 72436465 72436619 -127193531 + FAM SINE Alu 2 175 0 2279 90 10 7 chr5 72436619 72436920 -127193230 + AluSp SINE Alu 1 302 -11 899 274 27 5 chr5 72436974 72437193 -127192957 - MER58A DNA MER1_type 0 224 1 325 273 23 0 chr5 72437209 72437297 -127192853 + MER5A DNA MER1_type 9 98 -91 471 184 0 23 chr5 72437348 72437435 -127192715 - FLAM_C SINE Alu -22 121 37 1116 73 8 2 chr5 72437462 72437723 -127192427 + AluSg SINE Alu 1 308 -2 1802 159 36 13 chr5 72438632 72438933 -127191217 - AluSx SINE Alu -4 308 1 500 236 98 88 chr5 72438936 72439127 -127191023 - L1M4 LINE L1 -865 5281 5093 1958 135 52 0 chr5 72439127 72439416 -127190734 + AluSx SINE Alu 1 304 -8 500 236 98 88 chr5 72439416 72439757 -127190393 - L1M4 LINE L1 -1053 5093 4744 22 35 0 0 chr5 72439885 72439914 -127190236 + AT_rich Low_complexity Low_complexity 1 29 0 548 331 33 0 chr5 72439941 72440186 -127189964 - L1ME LINE L1 -330 5791 5539 1624 144 29 120 chr5 72440850 72441232 -127188918 + MER7A DNA MER2_type 1 345 -1 29 0 0 0 chr5 72441416 72441445 -127188705 + AT_rich Low_complexity Low_complexity 1 29 0 530 215 9 0 chr5 72442077 72442184 -127187966 - MER58B DNA MER1_type -39 302 195 29 47 0 0 chr5 72443281 72443324 -127186826 + AT_rich Low_complexity Low_complexity 1 43 0 1759 173 0 11 chr5 72443365 72443649 -127186501 + AluJo SINE Alu 1 281 -31 428 333 49 15 chr5 72443681 72443967 -127186183 - HERVL LTR ERVL -2390 3264 2916 697 126 0 19 chr5 72443984 72444087 -127186063 - FRAM SINE Alu -23 153 53 629 325 71 26 chr5 72444143 72444595 -127185555 - HERVL LTR ERVL -2104 2892 2421 394 283 11 0 chr5 72444614 72444706 -127185444 + MER5B DNA MER1_type 1 93 -85 1373 143 198 28 chr5 72444709 72444961 -127185189 + AluJo SINE Alu 3 297 -5 1853 144 7 0 chr5 72444967 72445251 -127184899 + AluJb SINE Alu 1 286 -26 183 297 0 31 chr5 72445280 72445344 -127184806 + MER5B DNA MER1_type 99 160 -18 997 345 48 20 chr5 72445612 72446200 -127183950 - HERVL LTR ERVL -3644 2120 1517 710 123 16 8 chr5 72446524 72446646 -127183504 - MER2 DNA MER2_type -134 211 89 1757 168 3 13 chr5 72446646 72446950 -127183200 - AluJb SINE Alu -11 301 1 405 171 12 17 chr5 72447060 72447143 -127183007 - MER5A DNA MER1_type -18 171 80 1676 129 51 0 chr5 72447145 72447400 -127182750 - AluSq SINE Alu -17 296 29 2525 156 9 18 chr5 72447403 72447839 -127182311 + LTR3 LTR ERVK 1 432 0 23157 119 17 4 chr5 72447846 72448452 -127181698 + HERVK3 LTR ERVK 2 599 -6644 2438 100 3 0 chr5 72448452 72448763 -127181387 + AluSx SINE Alu 1 312 0 23157 119 17 4 chr5 72448763 72451515 -127178635 + HERVK3 LTR ERVK 599 3403 -3840 14297 99 3 3 chr5 72451507 72453419 -127176731 + HERVK3 LTR ERVK 5329 7241 -2 * 2423 141 17 24 chr5 72453421 72453841 -127176309 + LTR3 LTR ERVK 1 417 -15 256 125 25 0 chr5 72453862 72453902 -127176248 + HERVK3 LTR ERVK 2 42 -7201 567 211 16 0 chr5 72453925 72454048 -127176102 - MER5A DNA MER1_type -64 125 1 469 230 9 18 chr5 72454058 72454171 -127175979 - MER5B DNA MER1_type -4 174 63 501 166 115 0 chr5 72454172 72454186 -127175964 - L1MA10 LINE L1 0 6334 6321 565 235 64 81 chr5 72454186 72454480 -127175670 - L1ME1 LINE L1 -5 6161 5873 2342 104 0 0 chr5 72454480 72454787 -127175363 - AluSq SINE Alu -6 307 1 565 235 64 81 chr5 72454787 72454850 -127175300 - L1ME1 LINE L1 -293 5873 5810 875 162 7 0 chr5 72455029 72455165 -127174985 - FLAM_A SINE Alu 0 142 6 389 185 49 12 chr5 72455173 72455254 -127174896 - L1MD3 LINE L1 -20 7975 7892 1971 157 82 129 chr5 72455258 72455413 -127174737 + MER67C LTR ERV1 1 162 -548 2124 99 0 0 chr5 72455413 72455686 -127174464 - AluSc SINE Alu -36 273 1 1971 157 82 129 chr5 72455686 72456102 -127174048 + MER67C LTR ERV1 162 545 -165 682 120 0 0 chr5 72456104 72456196 -127173954 - AluSg/x SINE Alu -16 294 203 774 149 13 13 chr5 72456210 72456364 -127173786 + MER67C LTR ERV1 555 708 -2 471 139 58 0 chr5 72456365 72456451 -127173699 - L1MC4a LINE L1 -91 7717 7627 894 268 65 42 chr5 72456452 72456688 -127173462 + MER2 DNA MER2_type 1 249 -96 1864 141 21 7 chr5 72456688 72456978 -127173172 - AluJb SINE Alu -18 294 1 894 268 65 42 chr5 72456978 72457077 -127173073 + MER2 DNA MER2_type 249 344 -1 836 196 138 27 chr5 72457097 72457277 -127172873 - L1MD2 LINE L1 -211 6148 5937 1422 163 89 35 chr5 72457277 72457559 -127172591 - AluJb SINE Alu -15 297 1 836 196 138 27 chr5 72457559 72457603 -127172547 - L1MD2 LINE L1 -422 5937 5899 924 135 96 39 chr5 72457603 72457781 -127172369 + MER77 LTR ERV1 3 190 -415 673 138 46 0 chr5 72457771 72457880 -127172270 + MER77 LTR ERV1 478 591 -14 * 1600 164 66 7 chr5 72457917 72458204 -127171946 - AluJo SINE Alu -4 308 5 738 242 6 0 chr5 72458208 72458390 -127171760 - L1MD2 LINE L1 -348 5818 5636 256 344 11 0 chr5 72458710 72458803 -127171347 + ERVL LTR ERVL 814 907 -4857 666 194 245 0 chr5 72458990 72459145 -127171005 + MLT1G1 LTR MaLR 13 205 -390 261 261 43 0 chr5 72459457 72459549 -127170601 - L2 LINE L2 -212 3060 2965 21 36 0 0 chr5 72459732 72459760 -127170390 + AT_rich Low_complexity Low_complexity 1 28 0 2513 58 0 0 chr5 72459760 72460075 -127170075 + AluY SINE Alu 1 311 0 1210 191 29 4 chr5 72460090 72460331 -127169819 - AluJo SINE Alu -1 311 65 2231 122 0 3 chr5 72460560 72460864 -127169286 - AluSx SINE Alu -9 303 1 1662 144 92 0 chr5 72461532 72461816 -127168334 + AluJb SINE Alu 2 311 -1 2530 160 118 53 chr5 72461950 72462537 -127167613 - MER51A LTR ERV1 -9 625 1 197 284 142 43 chr5 72463251 72463413 -127166737 - MER5B DNA MER1_type 0 178 1 2404 83 3 0 chr5 72463477 72463778 -127166372 + AluSq SINE Alu 1 302 -11 318 317 60 20 chr5 72464903 72465102 -127165048 - MLT1I LTR MaLR -101 308 102 615 294 61 31 chr5 72465196 72465424 -127164726 - MIR SINE MIR -26 236 2 222 62 0 0 chr5 72465598 72465630 -127164520 + (CA)n Simple_repeat Simple_repeat 2 33 0 1122 207 7 58 chr5 72465896 72466022 -127164128 - L1M4 LINE L1 -3241 2905 2774 2205 88 10 3 chr5 72466022 72466317 -127163833 + AluSx SINE Alu 1 297 -15 1122 207 7 58 chr5 72466317 72466485 -127163665 - L1M4 LINE L1 -3372 2774 2626 2341 83 3 10 chr5 72466911 72467224 -127162926 - AluSp SINE Alu -2 311 1 1435 162 34 88 chr5 72467227 72467555 -127162595 - AluJo SINE Alu -2 310 1 2253 121 0 6 chr5 72467586 72467900 -127162250 + AluSx SINE Alu 1 312 0 2117 123 0 7 chr5 72468577 72468877 -127161273 - AluSx SINE Alu -14 298 1 35 24 0 0 chr5 72469008 72469050 -127161100 + AT_rich Low_complexity Low_complexity 1 42 0 769 144 24 0 chr5 72469050 72469175 -127160975 - FLAM_C SINE Alu -5 128 1 576 173 0 29 chr5 72469429 72469533 -127160617 - FLAM_A SINE Alu -19 123 23 2374 94 3 0 chr5 72469734 72470032 -127160118 + AluSx SINE Alu 1 299 -13 2202 106 0 7 chr5 72470385 72470678 -127159472 - AluSx SINE Alu -11 301 11 1517 168 51 4 chr5 72470681 72470937 -127159213 + AluJo SINE Alu 35 302 -10 236 171 0 0 chr5 72471966 72472007 -127158143 - L2 LINE L2 -12 3301 3261 1560 227 54 55 chr5 72472015 72472150 -127158000 - L2 LINE L2 -17 3296 3162 2258 99 3 0 chr5 72472150 72472442 -127157708 + AluY SINE Alu 1 293 -18 1560 227 54 55 chr5 72472442 72473166 -127156984 - L2 LINE L2 -151 3162 2438 296 235 54 66 chr5 72473184 72473350 -127156800 - L1ME4a LINE L1 -103 6018 5855 777 218 28 11 chr5 72473371 72473550 -127156600 + MIR SINE MIR 12 193 -69 2398 78 7 0 chr5 72473555 72473851 -127156299 - AluSc SINE Alu -6 303 6 2023 109 3 56 chr5 72473946 72474250 -127155900 - AluSx SINE Alu -24 288 1 1669 172 3 31 chr5 72474258 72474549 -127155601 - AluJb SINE Alu -24 288 6 2338 97 0 7 chr5 72474582 72474891 -127155259 + AluSx SINE Alu 1 307 -5 662 205 0 0 chr5 72474891 72475003 -127155147 - FLAM_A SINE Alu -18 115 4 2266 98 7 0 chr5 72475380 72475676 -127154474 + AluSx SINE Alu 1 298 -14 514 143 0 0 chr5 72475815 72475899 -127154251 - FLAM_A SINE Alu 0 142 59 916 199 0 0 chr5 72475928 72476079 -127154071 - FRAM SINE Alu -18 158 8 603 264 90 62 chr5 72476136 72476424 -127153726 - MLT1K LTR MaLR 0 588 293 380 329 93 6 chr5 72476471 72476632 -127153518 - MLT1K LTR MaLR -404 184 10 281 293 0 30 chr5 72476707 72476806 -127153344 - MIR SINE MIR -147 115 20 2459 69 0 13 chr5 72478629 72478935 -127151215 + AluY SINE Alu 3 304 -7 327 339 60 6 chr5 72479254 72479422 -127150728 - MIR SINE MIR -37 225 49 43298 33 25 1 chr5 72480076 72486087 -127144063 - L1PA2 LINE L1 0 6155 2 2228 102 0 3 chr5 72486198 72486492 -127143658 + AluSc SINE Alu 1 293 -16 341 271 39 58 chr5 72486533 72486612 -127143538 + L1MC/D LINE L1 5620 5696 -2112 1895 157 7 10 chr5 72486612 72486917 -127143233 + AluJo SINE Alu 1 304 -8 341 271 39 58 chr5 72486917 72486992 -127143158 + L1MC/D LINE L1 5696 5771 -2037 2427 69 0 50 chr5 72487277 72487597 -127142553 - AluY SINE Alu -7 304 1 764 154 8 15 chr5 72488020 72488150 -127142000 - FLAM_C SINE Alu -4 129 1 412 117 0 17 chr5 72488179 72488239 -127141911 - MLT1C LTR MaLR -2 465 407 531 237 15 15 chr5 72488240 72488375 -127141775 - AluJo SINE Alu -177 135 1 769 247 99 25 chr5 72488375 72488725 -127141425 - MLT1C LTR MaLR -56 411 24 24 32 0 0 chr5 72488975 72489006 -127141144 + AT_rich Low_complexity Low_complexity 1 31 0 919 162 18 2 chr5 72489008 72489236 -127140914 + AluJb SINE Alu 2 289 -23 24 0 0 0 chr5 72489241 72489265 -127140885 + AT_rich Low_complexity Low_complexity 1 24 0 297 0 0 0 chr5 72489523 72489556 -127140594 + (CA)n Simple_repeat Simple_repeat 2 34 0 651 170 9 9 chr5 72489869 72489981 -127140169 + FLAM_C SINE Alu 6 117 -26 2144 117 3 10 chr5 72489990 72490290 -127139860 - AluSx SINE Alu -14 298 1 2093 137 0 7 chr5 72490476 72490775 -127139375 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 72490954 72490975 -127139175 + AT_rich Low_complexity Low_complexity 1 21 0 320 291 0 13 chr5 72491113 72491192 -127138958 + MER21B LTR ERV1 12 89 -774 3359 201 95 17 chr5 72491299 72492081 -127138069 + MER21B LTR ERV1 21 863 0 1033 189 206 65 chr5 72493676 72493967 -127136183 + MSTD LTR MaLR 8 339 -57 713 70 10 0 chr5 72493970 72494070 -127136080 + (TTCC)n Simple_repeat Simple_repeat 4 104 0 691 188 51 0 chr5 72494075 72494192 -127135958 - FLAM_C SINE Alu -19 124 2 460 114 14 0 chr5 72494193 72494263 -127135887 + MSTD LTR MaLR 358 428 0 1971 149 0 10 chr5 72494756 72495052 -127135098 - AluJb SINE Alu -7 305 13 782 167 8 0 chr5 72495073 72495205 -127134945 - FLAM_A SINE Alu 0 133 1 2251 82 32 0 chr5 72495229 72495511 -127134639 + AluY SINE Alu 4 294 -17 26 0 0 0 chr5 72495882 72495908 -127134242 + AT_rich Low_complexity Low_complexity 1 26 0 605 185 67 15 chr5 72496732 72496867 -127133283 + FLAM_C SINE Alu 1 142 -1 967 142 77 0 chr5 72496953 72497108 -127133042 + AluJb SINE Alu 133 299 -13 22 0 0 0 chr5 72497169 72497191 -127132959 + AT_rich Low_complexity Low_complexity 1 22 0 1803 114 15 4 chr5 72497235 72497506 -127132644 + L1MA1 LINE L1 5980 6253 -49 627 138 0 0 chr5 72497508 72497602 -127132548 + AluJ/FLAM SINE Alu 2 95 -217 365 52 52 0 chr5 72497793 72497851 -127132299 + L1MA3 LINE L1 6245 6305 0 1602 130 106 14 chr5 72497932 72498224 -127131926 - L1MB8 LINE L1 0 6178 5860 512 207 0 0 chr5 72498224 72498311 -127131839 - FLAM_A SINE Alu -55 87 1 849 51 0 0 chr5 72498335 72498433 -127131717 + AluY SINE Alu 4 101 -210 1343 239 138 67 chr5 72498694 72499246 -127130904 - MLT1E LTR MaLR 0 593 3 1362 202 90 39 chr5 72499460 72499816 -127130334 - MLT1A2 LTR MaLR 0 374 1 2379 83 7 0 chr5 72499878 72500180 -127129970 - AluSp SINE Alu -5 308 5 2194 129 3 0 chr5 72500189 72500500 -127129650 - AluSx SINE Alu 0 312 1 273 259 45 37 chr5 72500989 72501186 -127128964 - L1MB8 LINE L1 -559 5775 5575 22 56 0 0 chr5 72501403 72501439 -127128711 + AT_rich Low_complexity Low_complexity 1 36 0 340 225 77 0 chr5 72501529 72501622 -127128528 - L1MC5 LINE L1 0 7995 7840 3103 179 44 12 chr5 72502349 72502941 -127127209 - L1MB3 LINE L1 -8 6175 5565 2737 166 35 20 chr5 72502944 72503340 -127126810 - L1M4 LINE L1 -371 5807 5418 2370 95 0 16 chr5 72503340 72503657 -127126493 - AluSx SINE Alu 0 312 1 2737 166 35 20 chr5 72503657 72504177 -127125973 - L1M4 LINE L1 -760 5418 4869 228 229 184 9 chr5 72504256 72504365 -127125785 + L1MC4a LINE L1 5868 5995 -1813 2136 138 7 0 chr5 72504437 72504742 -127125408 + AluSx SINE Alu 1 307 -5 1614 148 20 30 chr5 72504742 72505039 -127125111 + L1MB7 LINE L1 5891 6184 0 276 30 0 0 chr5 72505248 72505281 -127124869 + (TTA)n Simple_repeat Simple_repeat 2 34 0 223 315 55 0 chr5 72506665 72506738 -127123412 - L2 LINE L2 -62 3210 3134 327 301 53 8 chr5 72506847 72506980 -127123170 - L2 LINE L2 -208 3064 2926 2750 13 23 0 chr5 72507038 72507343 -127122807 - AluYb8 SINE Alu -6 312 1 223 308 67 17 chr5 72507344 72507464 -127122686 + MIR SINE MIR 28 153 -109 447 286 84 0 chr5 72507904 72508023 -127122127 - L2 LINE L2 -2 3270 3142 922 248 15 5 chr5 72508130 72508328 -127121822 + MER63A DNA MER1_type 5 204 -6 258 246 32 79 chr5 72508360 72508486 -127121664 + MIR SINE MIR 143 262 0 189 0 0 0 chr5 72508594 72508615 -127121535 + (TA)n Simple_repeat Simple_repeat 1 21 0 800 186 0 8 chr5 72508615 72508744 -127121406 - FLAM_C SINE Alu -13 130 3 367 284 135 7 chr5 72508792 72508940 -127121210 + MIR SINE MIR 2 168 -94 237 318 80 36 chr5 72510111 72510271 -127119879 + MIR SINE MIR 10 186 -60 254 231 132 0 chr5 72511361 72511452 -127118698 - L1ME4a LINE L1 -9 6112 6010 247 234 94 23 chr5 72511487 72511615 -127118535 - L1ME4a LINE L1 -177 5944 5808 216 268 0 18 chr5 72511626 72511682 -127118468 + L2 LINE L2 3255 3309 -4 1961 135 26 13 chr5 72511907 72512233 -127117917 + AluSx SINE Alu 1 312 0 1769 101 0 0 chr5 72512294 72512521 -127117629 - AluSq SINE Alu -86 227 1 10718 118 54 30 chr5 72512760 72513202 -127116948 - Tigger1 DNA MER2_type 0 2418 1988 2179 94 21 0 chr5 72513202 72513489 -127116661 - AluY SINE Alu -18 293 1 10718 118 54 30 chr5 72513489 72514003 -127116147 - Tigger1 DNA MER2_type -430 1988 1488 2384 98 0 0 chr5 72514003 72514298 -127115852 - AluSx SINE Alu -17 295 1 10718 118 54 30 chr5 72514298 72515083 -127115067 - Tigger1 DNA MER2_type -930 1488 634 218 224 0 51 chr5 72515732 72515830 -127114320 + T-rich Low_complexity Low_complexity 2 94 0 192 247 96 0 chr5 72515877 72515950 -127114200 - MIR SINE MIR -122 140 61 399 273 70 8 chr5 72516024 72516152 -127113998 - MIR3 SINE MIR -61 147 12 268 333 0 28 chr5 72517667 72517808 -127112342 + GA-rich Low_complexity Low_complexity 4 140 0 965 156 0 19 chr5 72518324 72518484 -127111666 + AluJb SINE Alu 131 287 -25 1984 139 3 17 chr5 72518577 72518872 -127111278 + AluJo SINE Alu 1 291 -21 22 56 0 0 chr5 72518930 72518966 -127111184 + AT_rich Low_complexity Low_complexity 1 36 0 204 240 20 0 chr5 72518974 72519024 -127111126 + L2 LINE L2 3263 3313 0 501 141 0 0 chr5 72519496 72519581 -127110569 + (TG)n Simple_repeat Simple_repeat 2 86 0 29 0 0 0 chr5 72519934 72519963 -127110187 + AT_rich Low_complexity Low_complexity 1 29 0 1219 125 0 27 chr5 72521393 72521577 -127108573 + FRAM SINE Alu 1 176 0 335 185 15 0 chr5 72521815 72521880 -127108270 - MER3 DNA MER1_type -137 72 7 989 152 12 35 chr5 72521965 72522136 -127108014 - AluJb SINE Alu -134 178 12 189 301 147 64 chr5 72522422 72522578 -127107572 + MIR3 SINE MIR 38 206 -2 180 0 0 0 chr5 72523015 72523035 -127107115 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 480 291 109 18 chr5 72523048 72523268 -127106882 - L2 LINE L2 -954 2360 2121 758 179 0 22 chr5 72524162 72524296 -127105854 - FLAM_C SINE Alu -2 131 1 604 289 84 14 chr5 72524911 72525348 -127104802 + L1M4 LINE L1 2899 3389 -2757 375 261 108 18 chr5 72525356 72525467 -127104683 - MER5B DNA MER1_type -56 122 2 2089 115 19 25 chr5 72525929 72526112 -127104038 - AluSx SINE Alu 0 312 130 2333 78 0 3 chr5 72526112 72526429 -127103721 - AluY SINE Alu 0 311 1 2089 115 19 25 chr5 72526429 72526559 -127103591 - AluSx SINE Alu -182 130 1 1978 154 3 7 chr5 72529048 72529353 -127100797 + AluJb SINE Alu 1 304 -8 1908 132 21 7 chr5 72529474 72529763 -127100387 - AluJb SINE Alu -9 303 11 2443 68 17 0 chr5 72530317 72530613 -127099537 - AluSp SINE Alu -12 301 1 2134 106 0 17 chr5 72531411 72531703 -127098447 + AluSx SINE Alu 1 287 -25 575 188 14 42 chr5 72532825 72532969 -127097181 - L1MB3 LINE L1 -67 6116 5977 2131 123 0 0 chr5 72532983 72533275 -127096875 - AluSx SINE Alu -20 292 1 340 303 21 14 chr5 72533323 72533468 -127096682 + L2 LINE L2 2174 2319 -995 574 307 155 55 chr5 72533506 72534141 -127096009 + L2 LINE L2 2562 3271 -1 24 32 0 0 chr5 72534397 72534428 -127095722 + AT_rich Low_complexity Low_complexity 1 31 0 894 146 0 0 chr5 72534605 72534728 -127095422 - FLAM_A SINE Alu -10 123 1 788 142 0 8 chr5 72535444 72535564 -127094586 + FLAM_C SINE Alu 1 119 -24 246 62 0 0 chr5 72535566 72535598 -127094552 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 392 268 24 39 chr5 72535730 72535857 -127094293 + MER94 DNA DNA 6 130 -4 1739 160 3 42 chr5 72536284 72536590 -127093560 - AluJb SINE Alu -18 294 1 811 259 96 39 chr5 72536804 72537062 -127093088 - L1ME4a LINE L1 -15 6106 5864 2416 91 0 0 chr5 72537062 72537358 -127092792 - AluSx SINE Alu -16 296 1 811 259 96 39 chr5 72537358 72537567 -127092583 - L1ME4a LINE L1 -257 5864 5612 2073 117 3 24 chr5 72537757 72538055 -127092095 + AluJb SINE Alu 5 296 -16 193 270 95 14 chr5 72538130 72538204 -127091946 + MIR SINE MIR 17 96 -112 182 200 0 25 chr5 72538496 72538536 -127091614 - MIR SINE MIR -3 259 221 230 281 62 55 chr5 72538637 72538765 -127091385 + MLT1K LTR MaLR 43 171 -417 828 168 42 0 chr5 72539223 72539366 -127090784 - FRAM SINE Alu -28 148 1 483 151 139 0 chr5 72539621 72539707 -127090443 - AluJ/FLAM SINE Alu -213 99 2 448 178 0 0 chr5 72539709 72539782 -127090368 - MER5A DNA MER1_type -114 75 3 196 211 19 19 chr5 72539786 72539838 -127090312 + MIR3 SINE MIR 155 206 -2 734 233 5 69 chr5 72539963 72540027 -127090123 + MER5B DNA MER1_type 1 68 -110 2207 118 0 19 chr5 72540027 72540342 -127089808 + AluSc SINE Alu 1 309 0 734 233 5 69 chr5 72540342 72540466 -127089684 + MER5B DNA MER1_type 68 177 -1 1811 174 0 3 chr5 72540930 72541285 -127088865 + AluSx SINE Alu 1 354 0 2359 65 0 7 chr5 72541336 72541628 -127088522 - AluY SINE Alu -21 290 1 2050 145 12 21 chr5 72541637 72541974 -127088176 - L1MB4 LINE L1 0 6180 5847 452 302 98 14 chr5 72542146 72542361 -127087789 + L2 LINE L2 2414 2646 -668 549 355 13 22 chr5 72542556 72542787 -127087363 + L3 LINE CR1 729 957 -620 795 108 43 32 chr5 72542819 72543074 -127087076 + CT-rich Low_complexity Low_complexity 1 257 0 2036 134 7 0 chr5 72543091 72543382 -127086768 - AluSx SINE Alu -19 293 1 521 184 224 0 chr5 72543393 72543491 -127086659 - FLAM_A SINE Alu -13 120 1 356 285 127 32 chr5 72543491 72543640 -127086510 + L3 LINE CR1 972 1135 -442 204 267 0 89 chr5 72543640 72543741 -127086409 - MER5A DNA MER1_type 0 189 98 208 284 45 0 chr5 72543807 72543895 -127086255 + L3 LINE CR1 1190 1281 -296 2479 50 0 7 chr5 72543962 72544262 -127085888 + AluY SINE Alu 4 301 -10 2366 103 0 0 chr5 72544412 72544713 -127085437 + AluSg SINE Alu 1 301 -9 319 286 24 0 chr5 72544718 72544802 -127085348 - MER5A DNA MER1_type -83 106 21 188 388 43 9 chr5 72545039 72545155 -127084995 + MIR SINE MIR 19 138 -124 1170 182 70 5 chr5 72545219 72545433 -127084717 - AluJo SINE Alu -84 228 1 734 284 122 6 chr5 72546019 72546364 -127083786 + MLT1L LTR MaLR 230 614 -1 723 213 0 0 chr5 72546594 72546716 -127083434 - FLAM_A SINE Alu -11 122 1 225 217 22 0 chr5 72546830 72546876 -127083274 + CT-rich Low_complexity Low_complexity 2 48 0 186 273 17 97 chr5 72547416 72547592 -127082558 + L2 LINE L2 2625 2786 -528 8316 130 22 7 chr5 72547754 72550335 -127079815 - L1MA3 LINE L1 0 6305 3693 243 0 0 0 chr5 72550339 72550366 -127079784 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 707 196 0 0 chr5 72550376 72550488 -127079662 - FLAM_C SINE Alu -31 112 1 2123 64 0 48 chr5 72550491 72550950 -127079200 - AluY SINE Alu 0 445 1 2948 171 175 151 chr5 72550958 72551580 -127078570 - L1MA3 LINE L1 -2452 3694 3089 1230 163 0 5 chr5 72551580 72551776 -127078374 + AluJo SINE Alu 1 195 -117 2948 171 175 151 chr5 72551776 72552271 -127077879 - L1MA3 LINE L1 -3057 3089 2350 247 306 129 16 chr5 72552271 72552464 -127077686 - HAL1 LINE L1 -114 2393 2179 330 115 0 0 chr5 72552817 72552869 -127077281 + (CA)n Simple_repeat Simple_repeat 1 52 0 358 275 168 7 chr5 72553009 72553158 -127076992 + ERVL LTR ERVL 526 698 -5066 1611 246 92 68 chr5 72553321 72554040 -127076110 + ERVL LTR ERVL 2307 3042 -2722 273 146 0 0 chr5 72554303 72554351 -127075799 + (TG)n Simple_repeat Simple_repeat 1 48 0 1128 147 35 0 chr5 72554376 72554546 -127075604 - AluJo SINE Alu -31 281 106 1812 138 45 4 chr5 72554676 72554945 -127075205 - AluSg SINE Alu -13 297 18 259 95 119 0 chr5 72554949 72554991 -127075159 - Alu SINE Alu -237 64 18 799 257 73 33 chr5 72554991 72555291 -127074859 + LTR16C LTR ERVL 174 485 -6 245 311 36 46 chr5 72555326 72555522 -127074628 - HAL1 LINE L1 -2299 208 15 382 336 210 16 chr5 72555530 72555911 -127074239 + L2 LINE L2 2818 3272 0 1935 145 3 14 chr5 72556274 72556571 -127073579 + AluJo SINE Alu 1 294 -18 509 178 0 47 chr5 72556573 72556680 -127073470 + MIR SINE MIR 35 136 -126 1383 225 83 40 chr5 72557648 72558142 -127072008 - L1MEc LINE L1 -4235 2372 1858 208 151 57 0 chr5 72558202 72558255 -127071895 + (TA)n Simple_repeat Simple_repeat 2 57 0 1712 152 3 66 chr5 72558403 72558734 -127071416 + AluJb SINE Alu 1 312 0 253 0 0 0 chr5 72558706 72558785 -127071365 + (CAA)n Simple_repeat Simple_repeat 2 80 0 647 104 83 0 chr5 72559013 72559109 -127071041 + FRAM SINE Alu 55 158 -18 15305 172 64 11 chr5 72559133 72565636 -127064514 + L1PB1 LINE L1 6 6853 -14 375 314 89 0 chr5 72566164 72566355 -127063795 - L1MEc LINE L1 -4751 1675 1468 851 244 71 81 chr5 72566406 72566712 -127063438 - L1MEc LINE L1 -5039 1568 1260 333 0 0 0 chr5 72566712 72566749 -127063401 + (TG)n Simple_repeat Simple_repeat 2 38 0 851 244 71 81 chr5 72566749 72566790 -127063360 - L1MEc LINE L1 -5347 1260 1220 1566 171 4 25 chr5 72566790 72567070 -127063080 + AluJb SINE Alu 1 274 -38 851 244 71 81 chr5 72567070 72567196 -127062954 - L1MEc LINE L1 -5387 1220 1099 2493 83 0 6 chr5 72567196 72567510 -127062640 - AluSq SINE Alu -1 312 1 851 244 71 81 chr5 72567510 72567612 -127062538 - L1MEc LINE L1 -5508 1099 997 699 106 0 0 chr5 72567905 72567999 -127062151 + L1PB1 LINE L1 6050 6143 -8 233 22 87 0 chr5 72568028 72568074 -127062076 + (TAA)n Simple_repeat Simple_repeat 2 51 0 202 258 89 48 chr5 72568622 72568746 -127061404 + L2 LINE L2 3082 3210 -103 1014 203 12 0 chr5 72568968 72569131 -127061019 - FAM SINE Alu -10 165 1 1670 153 15 0 chr5 72569333 72569601 -127060549 - L1MB2 LINE L1 -9 6162 5891 272 266 137 14 chr5 72569857 72569996 -127060154 - L1MEc LINE L1 -6179 428 273 484 291 138 5 chr5 72570145 72570334 -127059816 - MIR SINE MIR -20 242 29 1095 173 56 5 chr5 72570439 72570653 -127059497 - L1MA8 LINE L1 -10 6281 6057 256 200 0 0 chr5 72571045 72571095 -127059055 - LTR67 LTR ERVL -491 66 17 304 299 0 66 chr5 72571390 72571527 -127058623 - MIR SINE MIR -27 235 108 1023 224 34 38 chr5 72571962 72572225 -127057925 + MIR SINE MIR 1 262 0 322 235 173 0 chr5 72572419 72572588 -127057562 - L1MB2 LINE L1 -394 5768 5621 33 66 0 0 chr5 72572894 72572955 -127057195 + AT_rich Low_complexity Low_complexity 1 61 0 185 319 21 32 chr5 72573313 72573407 -127056743 - L3b LINE CR1 -96 1487 1395 2026 106 0 25 chr5 72574139 72574421 -127055729 - AluSx SINE Alu -37 275 1 1954 134 0 41 chr5 72574549 72574863 -127055287 + AluJo SINE Alu 1 301 -11 194 306 83 14 chr5 72575486 72575558 -127054592 + MIR SINE MIR 13 89 -173 710 233 83 33 chr5 72576115 72576167 -127053983 + MIR SINE MIR 9 57 -205 2252 131 16 49 chr5 72576167 72576555 -127053595 - THE1C LTR MaLR 0 375 1 710 233 83 33 chr5 72576555 72576682 -127053468 + MIR SINE MIR 57 197 -65 372 235 141 59 chr5 72577476 72577589 -127052561 + MIR SINE MIR 58 191 -71 835 130 0 30 chr5 72577589 72577720 -127052430 + FLAM_C SINE Alu 1 127 -6 372 235 141 59 chr5 72577720 72577776 -127052374 + MIR SINE MIR 191 241 -21 2246 121 0 3 chr5 72578934 72579247 -127050903 + AluSx SINE Alu 1 312 0 274 301 139 17 chr5 72579497 72579670 -127050480 - L2 LINE L2 -469 2845 2652 304 293 52 9 chr5 72580895 72581011 -127049139 - MIR SINE MIR -71 191 71 271 235 41 51 chr5 72581447 72581545 -127048605 + Charlie8 DNA MER1_type 72 168 -2249 473 225 42 63 chr5 72581723 72581865 -127048285 + MER5B DNA MER1_type 34 172 -6 191 200 256 24 chr5 72582991 72583116 -127047034 + MIR SINE MIR 40 193 -69 534 187 0 22 chr5 72583294 72583385 -127046765 - AluJ/FLAM SINE Alu -211 101 13 209 356 67 0 chr5 72583762 72583852 -127046298 + MIR SINE MIR 46 141 -67 1229 256 96 66 chr5 72583941 72584515 -127045635 + MLT1E LTR MaLR 2 592 -1 1342 279 31 28 chr5 72584534 72584925 -127045225 - MLT1I LTR MaLR 0 409 18 330 340 53 0 chr5 72586548 72586642 -127043508 - L2 LINE L2 -40 3232 3134 21 0 0 0 chr5 72587190 72587211 -127042939 + AT_rich Low_complexity Low_complexity 1 21 0 2093 114 0 0 chr5 72588571 72588898 -127041252 + AluSg SINE Alu 1 327 0 1749 159 3 42 chr5 72589896 72590204 -127039946 - AluJb SINE Alu -16 296 1 239 237 68 0 chr5 72590549 72590608 -127039542 - MADE1 DNA Mariner -17 63 1 323 65 3 0 chr5 72590992 72591037 -127039113 + THE1A LTR MaLR 17 55 -300 4922 95 41 0 chr5 72591037 72591721 -127038429 + THE1A-int LTR MaLR 863 1574 -6 2124 112 13 3 chr5 72591726 72592029 -127038121 + THE1A LTR MaLR 1 306 -49 514 245 150 126 chr5 72592131 72592624 -127037526 + L2 LINE L2 1773 2277 -1037 1173 286 71 29 chr5 72593306 72593543 -127036607 + L2 LINE L2 2505 2731 -582 2392 129 25 25 chr5 72593543 72593907 -127036243 - THE1B LTR MaLR 0 364 1 1173 286 71 29 chr5 72593907 72594343 -127035807 + L2 LINE L2 2731 3216 -97 248 364 127 9 chr5 72594705 72594815 -127035335 + L2 LINE L2 3134 3256 -16 2034 184 54 31 chr5 72594918 72595364 -127034786 + MLT1C LTR MaLR 12 467 0 365 287 110 7 chr5 72595492 72595628 -127034522 - L2 LINE L2 -4 3309 3160 255 339 39 16 chr5 72597642 72597769 -127032381 + MIR SINE MIR 20 149 -113 3618 195 66 23 chr5 72598037 72598899 -127031251 + L1M4 LINE L1 4097 4995 -1151 689 151 8 56 chr5 72598900 72599026 -127031124 + FLAM_A SINE Alu 9 128 -14 515 143 101 42 chr5 72599028 72599147 -127031003 + L1M4 LINE L1 4987 5112 -1034 3128 170 4 2 chr5 72599249 72599785 -127030365 - L1 LINE L1 -1846 4300 3764 311 136 0 136 chr5 72599899 72599978 -127030172 + Tigger2 DNA MER2_type 4 71 -2647 231 224 103 0 chr5 72599978 72600036 -127030114 - MER2 DNA MER2_type 0 345 282 * 719 266 29 6 chr5 72600013 72600186 -127029964 - MER8 DNA MER2_type -62 177 1 757 145 169 0 chr5 72600205 72600329 -127029821 + AluJb SINE Alu 3 147 -165 1200 162 36 40 chr5 72600498 72600745 -127029405 + L1MB8 LINE L1 5927 6172 -6 463 268 10 25 chr5 72601169 72601367 -127028783 - L1MEc LINE L1 -5222 1174 980 717 226 35 30 chr5 72601377 72601576 -127028574 - MER58C DNA MER1_type -15 200 1 708 292 39 39 chr5 72601608 72602023 -127028127 - L1MEc LINE L1 -5467 929 515 2411 200 35 67 chr5 72602168 72602305 -127027845 - L1M4 LINE L1 -1168 4978 4838 1252 71 0 16 chr5 72602305 72602488 -127027662 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2411 200 35 67 chr5 72602488 72602518 -127027632 - L1M4 LINE L1 -1308 4838 4809 1768 171 7 0 chr5 72602518 72602804 -127027346 - AluJo SINE Alu -24 288 1 2411 200 35 67 chr5 72602804 72603264 -127026886 - L1M4 LINE L1 -1337 4809 4370 603 118 9 82 chr5 72603860 72603970 -127026180 - AluJo SINE Alu -176 136 35 1528 241 9 3 chr5 72604710 72605042 -127025108 + MER58B DNA MER1_type 2 335 -6 24 53 0 0 chr5 72605327 72605365 -127024785 + AT_rich Low_complexity Low_complexity 1 38 0 261 277 16 13 chr5 72605537 72605691 -127024459 - L1ME LINE L1 -720 5431 5280 21 0 0 0 chr5 72606387 72606408 -127023742 + AT_rich Low_complexity Low_complexity 1 21 0 189 103 0 0 chr5 72606539 72606568 -127023582 + L2 LINE L2 3025 3053 -219 258 255 82 20 chr5 72606604 72606702 -127023448 - L1ME4a LINE L1 0 6121 6018 2271 97 0 3 chr5 72606823 72607123 -127023027 + AluSx SINE Alu 1 299 -13 865 218 92 0 chr5 72607132 72607371 -127022779 + L1M4 LINE L1 2616 2876 -3270 6431 102 33 0 chr5 72607372 72608431 -127021719 - L1PA14 LINE L1 0 6161 5091 945 195 6 0 chr5 72608431 72608605 -127021545 + MSTB1 LTR MaLR 258 432 0 1622 246 10 5 chr5 72608605 72609012 -127021138 + L1M4 LINE L1 3719 4127 -2019 551 289 25 55 chr5 72609435 72609670 -127020480 + L2 LINE L2 3074 3301 -12 575 265 94 2 chr5 72611893 72612128 -127018022 - L1MC4a LINE L1 -351 5815 5594 283 240 116 39 chr5 72612600 72612729 -127017421 + L1ME3A LINE L1 6008 6146 -24 6502 112 12 2 chr5 72612915 72614207 -127015943 - L1MA1 LINE L1 -150 6152 4850 671 243 17 11 chr5 72614309 72614490 -127015660 - L2 LINE L2 -679 2635 2454 1788 134 0 0 chr5 72614490 72614736 -127015414 + AluSx SINE Alu 1 246 -66 12076 110 34 24 chr5 72614774 72616710 -127013440 + L1PA7 LINE L1 8 1993 -4468 15494 36 0 0 chr5 72616810 72618652 -127011498 - L1PA7 LINE L1 -1825 4636 2795 7607 80 6 1 chr5 72618648 72620415 -127009735 + L1PA7 LINE L1 4658 6431 -38 * 2556 213 54 18 chr5 72620516 72621141 -127009009 + L1ME2 LINE L1 5439 6086 -78 1150 255 25 84 chr5 72621141 72621319 -127008831 + MLT1E LTR MaLR 1 145 -448 5008 49 15 20 chr5 72621319 72621650 -127008500 - L1PA7 LINE L1 -2 6152 5824 2331 105 3 0 chr5 72621650 72621956 -127008194 - AluSq SINE Alu -6 307 1 5008 49 15 20 chr5 72621956 72622232 -127007918 - L1PA7 LINE L1 -330 5824 5548 1150 255 25 84 chr5 72622232 72622445 -127007705 + MLT1E LTR MaLR 145 369 -224 580 297 71 22 chr5 72622529 72622798 -127007352 + MLT1I LTR MaLR 5 286 -123 * 675 284 30 10 chr5 72622794 72622991 -127007159 + MLT1I LTR MaLR 191 391 -18 1098 167 0 90 chr5 72624562 72624796 -127005354 - AluJb SINE Alu -14 298 86 1216 131 0 6 chr5 72624799 72624996 -127005154 - AluSx SINE Alu 0 310 115 1003 80 0 0 chr5 72625096 72625221 -127004929 - AluSx SINE Alu -188 125 1 320 289 56 11 chr5 72625423 72625513 -127004637 + MER91C DNA MER1_type 17 110 -30 406 266 49 47 chr5 72625567 72625763 -127004387 - MIR SINE MIR -48 214 15 351 0 0 0 chr5 72626192 72626231 -127003919 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 203 176 0 0 chr5 72626277 72626311 -127003839 + GA-rich Low_complexity Low_complexity 3 36 0 378 255 93 43 chr5 72627053 72627214 -127002936 + MIR SINE MIR 90 258 -4 365 274 78 49 chr5 72627427 72627631 -127002519 - L1ME4a LINE L1 -53 6068 5859 276 298 83 32 chr5 72627826 72628078 -127002072 - L1ME3A LINE L1 -230 5940 5676 713 219 15 0 chr5 72628079 72628216 -127001934 + MER5A DNA MER1_type 32 170 -19 1302 214 111 38 chr5 72628272 72628641 -127001509 - MSTD LTR MaLR 0 396 1 531 200 96 0 chr5 72628675 72628800 -127001350 + MER3 DNA MER1_type 52 188 -21 483 175 10 10 chr5 72628774 72628877 -127001273 + MER3 DNA MER1_type 2231 2333 0 * 3252 98 9 74 chr5 72628980 72629531 -127000619 + L1P LINE L1 1981 2495 -3651 6028 39 3 0 chr5 72629539 72630214 -126999936 - L1PA4 LINE L1 -3 6152 5476 6277 109 29 23 chr5 72630220 72632172 -126997978 - SVA Other Other -518 1386 59 375 23 0 0 chr5 72632177 72632221 -126997929 + (GGGAGA)n Simple_repeat Simple_repeat 6 49 0 5200 34 3 0 chr5 72632222 72632945 -126997205 - L1P2 LINE L1 -664 5491 4767 1957 104 8 0 chr5 72633160 72633419 -126996731 + AluSp SINE Alu 37 297 -16 1921 181 147 20 chr5 72633474 72633922 -126996228 + MLT1D LTR MaLR 1 505 0 822 302 74 36 chr5 72633971 72634498 -126995652 + L1MC/D LINE L1 5254 5800 -2008 14679 112 37 66 chr5 72634537 72636109 -126994041 + Tigger1 DNA MER2_type 1 1618 -800 810 171 86 0 chr5 72636109 72636249 -126993901 + FAM SINE Alu 18 169 -16 14679 112 37 66 chr5 72636249 72637028 -126993122 + Tigger1 DNA MER2_type 1618 2418 0 700 277 33 59 chr5 72637146 72637453 -126992697 + MLT1H LTR MaLR 58 356 -193 1771 148 7 17 chr5 72637735 72638032 -126992118 - AluJb SINE Alu -18 294 1 376 164 79 14 chr5 72638182 72638322 -126991828 + MER3 DNA MER1_type 2394 2542 0 675 268 16 31 chr5 72638344 72638739 -126991411 - L1ME LINE L1 -588 5576 5191 1337 218 44 83 chr5 72638752 72639187 -126990963 - MER34 LTR ERV1 -124 418 1 622 214 97 32 chr5 72639187 72639341 -126990809 + HsTC2 DNA Tc2 1280 1619 -279 27 81 0 0 chr5 72639971 72640033 -126990117 + AT_rich Low_complexity Low_complexity 1 62 0 395 246 40 96 chr5 72640165 72640364 -126989786 - L1MDb LINE L1 -5447 1096 909 198 0 0 0 chr5 72640692 72640714 -126989436 + (GA)n Simple_repeat Simple_repeat 2 23 0 264 361 68 34 chr5 72640892 72641158 -126988992 - L1MDb LINE L1 -6210 330 56 4212 140 30 14 chr5 72641164 72641864 -126988286 + MER50 LTR ERV1 1 711 -23 370 282 82 15 chr5 72641907 72642195 -126987955 - L1M4c LINE L1 -4763 1800 1329 1531 140 0 21 chr5 72642199 72642442 -126987708 - AluJb SINE Alu -17 295 58 188 336 142 0 chr5 72642450 72642563 -126987587 + L2 LINE L2 2595 2723 -591 459 316 21 31 chr5 72642572 72642765 -126987385 + MLT1J LTR MaLR 261 451 -60 216 265 0 0 chr5 72642836 72642885 -126987265 + L2 LINE L2 2926 2974 -298 866 170 0 15 chr5 72643862 72643997 -126986153 - FLAM_C SINE Alu 0 133 1 1700 135 60 0 chr5 72644006 72644311 -126985839 - AluSq SINE Alu 0 321 1 2186 92 7 0 chr5 72644838 72645120 -126985030 + AluSc SINE Alu 1 284 -25 423 0 0 0 chr5 72645130 72645177 -126984973 + (TAAAA)n Simple_repeat Simple_repeat 4 50 0 539 349 65 27 chr5 72647913 72648575 -126981575 - L1ME LINE L1 -946 5200 4514 314 341 34 34 chr5 72648720 72648899 -126981251 - L1ME LINE L1 -1870 4276 4098 965 113 0 21 chr5 72648939 72649080 -126981070 - AluSq/x SINE Alu -174 138 1 912 237 9 40 chr5 72649083 72649311 -126980839 - MIR SINE MIR -2 260 40 1251 289 69 43 chr5 72649560 72650138 -126980012 + HERV16 LTR ERVL 1599 2191 -2805 1564 181 288 58 chr5 72650140 72650766 -126979384 + LTR50 LTR ERVL 1 770 -25 1108 299 56 12 chr5 72650769 72651200 -126978950 + HERV16 LTR ERVL 2188 2637 -2359 1945 171 28 53 chr5 72651601 72651999 -126978151 + MLT1B LTR MaLR 1 388 -2 326 362 36 14 chr5 72652106 72652327 -126977823 + HERV16 LTR ERVL 3195 3420 -2065 21 36 0 0 chr5 72652552 72652580 -126977570 + AT_rich Low_complexity Low_complexity 1 28 0 1391 267 52 41 chr5 72652660 72653143 -126977007 + LTR16C LTR ERVL 1 488 -3 198 0 0 0 chr5 72653175 72653197 -126976953 + (TC)n Simple_repeat Simple_repeat 1 22 0 1366 156 39 67 chr5 72653201 72653483 -126976667 - AluJb SINE Alu -38 274 1 308 280 153 8 chr5 72655172 72655290 -126974860 - MER5A DNA MER1_type -1 188 54 1138 68 0 0 chr5 72655333 72655479 -126974671 + L1PA13 LINE L1 6014 6159 -4 1922 123 40 3 chr5 72655499 72655739 -126974411 - L1MA4A LINE L1 -3 6300 6045 207 0 0 0 chr5 72655739 72655762 -126974388 + (TCTA)n Simple_repeat Simple_repeat 2 24 0 1922 123 40 3 chr5 72655762 72655822 -126974328 - L1MA4A LINE L1 -258 6045 5989 188 326 56 34 chr5 72656244 72656333 -126973817 - L2 LINE L2 -19 3294 3204 227 333 49 62 chr5 72656741 72656903 -126973247 + MIR SINE MIR 33 192 -70 2281 97 0 3 chr5 72656928 72657226 -126972924 + AluSq SINE Alu 1 297 -16 257 290 200 0 chr5 72659834 72659934 -126970216 + L1MC4a LINE L1 5620 5739 -2069 2177 108 0 0 chr5 72659934 72660213 -126969937 + AluSx SINE Alu 1 279 -33 243 0 0 0 chr5 72660214 72660241 -126969909 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2981 90 27 2 chr5 72660248 72660660 -126969490 + L1MA2 LINE L1 5883 6304 0 5997 135 10 23 chr5 72661513 72662501 -126967649 - L1MA8 LINE L1 0 6291 5317 8182 23 2 0 chr5 72662510 72663891 -126966259 - L1PA4 LINE L1 -3 6152 4771 14633 27 0 0 chr5 72663891 72665593 -126964557 + L1PA4 LINE L1 3082 4783 -1363 235 192 0 0 chr5 72665591 72665643 -126964507 - L1MA8 LINE L1 -980 5332 5281 * 1564 195 58 14 chr5 72665723 72666071 -126964079 + MLT1A1 LTR MaLR 1 363 -2 21 36 0 0 chr5 72667455 72667483 -126962667 + AT_rich Low_complexity Low_complexity 1 28 0 807 237 84 0 chr5 72667840 72668030 -126962120 + MER63A DNA MER1_type 5 210 0 312 305 101 50 chr5 72668825 72669145 -126961005 - LTR16A1 LTR ERVL -72 416 72 1921 299 53 17 chr5 72669629 72670161 -126959989 - MER115 DNA AcHobo -104 589 39 2276 107 10 0 chr5 72671897 72672197 -126957953 - AluSx SINE Alu -9 303 1 22 35 0 0 chr5 72672203 72672232 -126957918 + AT_rich Low_complexity Low_complexity 1 29 0 458 265 130 40 chr5 72672421 72672674 -126957476 + HAL1b LINE L1 422 697 -651 327 259 46 9 chr5 72673172 72673280 -126956870 + L1MC4a LINE L1 5732 5843 -1965 1710 142 38 38 chr5 72673789 72674128 -126956022 - L1MB7 LINE L1 -27 6157 5819 1233 106 0 0 chr5 72674130 72674300 -126955850 - AluSg/x SINE Alu -12 298 129 871 273 83 73 chr5 72674400 72675038 -126955112 + L2 LINE L2 2627 3312 -1 516 298 84 17 chr5 72675819 72675997 -126954153 + MIR SINE MIR 2 191 -71 229 266 13 38 chr5 72677152 72677231 -126952919 + MIR3 SINE MIR 106 182 -26 21 36 0 0 chr5 72678305 72678333 -126951817 + AT_rich Low_complexity Low_complexity 1 28 0 248 198 173 62 chr5 72678344 72678425 -126951725 + L2 LINE L2 3219 3308 -5 803 202 50 61 chr5 72678637 72678835 -126951315 - MIR SINE MIR -10 252 57 1413 192 0 8 chr5 72678842 72679112 -126951038 - AluJo SINE Alu 0 302 35 837 276 143 29 chr5 72679279 72679699 -126950451 - L2 LINE L2 -4 3309 2842 487 309 53 0 chr5 72679926 72680078 -126950072 + MIR SINE MIR 33 192 -70 582 299 84 0 chr5 72681517 72681731 -126948419 - MIR SINE MIR -17 245 14 1150 273 95 16 chr5 72682460 72682992 -126947158 - L2 LINE L2 -12 3301 2733 1848 149 10 32 chr5 72683001 72683309 -126946841 + AluJb SINE Alu 1 301 -11 1062 108 23 40 chr5 72685744 72685920 -126944230 - L1PA16 LINE L1 0 6166 5994 282 281 0 0 chr5 72685922 72686004 -126944146 + L1ME3 LINE L1 3977 4058 -2088 * 305 308 95 11 chr5 72686003 72686195 -126943955 + L1ME3 LINE L1 5698 5902 -260 203 191 0 24 chr5 72686366 72686408 -126943742 + GA-rich Low_complexity Low_complexity 2 42 0 516 301 126 6 chr5 72687461 72687894 -126942256 - L2 LINE L2 -284 3029 2538 470 311 56 25 chr5 72688255 72688451 -126941699 - MIR SINE MIR -48 214 13 345 47 0 0 chr5 72691064 72691107 -126939043 + (TG)n Simple_repeat Simple_repeat 1 43 0 213 39 0 0 chr5 72691106 72691132 -126939018 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 2111 152 0 0 chr5 72692109 72692419 -126937731 - AluJb SINE Alu 0 312 3 1663 177 10 20 chr5 72692635 72692929 -126937221 - AluJo SINE Alu -21 291 1 619 273 84 59 chr5 72693603 72693925 -126936225 - L1M4 LINE L1 -2273 3873 3544 390 248 244 20 chr5 72694231 72694530 -126935620 - L1M4 LINE L1 -2685 3461 3096 1504 176 0 20 chr5 72694623 72694878 -126935272 - AluJo SINE Alu -62 250 1 2145 109 0 34 chr5 72695061 72695381 -126934769 - AluSc SINE Alu 0 309 1 235 338 113 0 chr5 72695527 72695731 -126934419 - HAL1b LINE L1 -571 777 551 351 339 83 38 chr5 72695809 72696204 -126933946 - HAL1 LINE L1 -961 1546 1134 1500 208 14 4 chr5 72696854 72697162 -126932988 + AluJb SINE Alu 1 311 0 258 81 0 0 chr5 72697219 72697256 -126932894 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 465 231 19 9 chr5 72697268 72697376 -126932774 - L2 LINE L2 -6 3307 3199 1725 139 66 7 chr5 72699186 72699459 -126930691 + AluJb SINE Alu 1 289 -23 2679 176 35 2 chr5 72699459 72699949 -126930201 - L1MB4 LINE L1 -7 6173 5668 1879 173 7 0 chr5 72701217 72701512 -126928638 + AluJo SINE Alu 1 297 -15 827 260 31 0 chr5 72701536 72701732 -126928418 + MIR SINE MIR 23 224 -38 464 308 0 0 chr5 72701786 72701893 -126928257 + L2 LINE L2 3160 3266 -6 1888 145 7 14 chr5 72702311 72702600 -126927550 - AluJb SINE Alu -20 292 6 22 0 0 0 chr5 72702777 72702799 -126927351 + AT_rich Low_complexity Low_complexity 1 22 0 1337 156 25 114 chr5 72703276 72703635 -126926515 - MLT1A1 LTR MaLR -38 327 1 4346 167 25 26 chr5 72703636 72704773 -126925377 - L1MB8 LINE L1 -36 6142 5004 1639 198 48 54 chr5 72704777 72705204 -126924946 - MLT1D LTR MaLR -7 498 73 1625 187 41 85 chr5 72705204 72705665 -126924485 - LTR47B LTR ERVL 0 443 3 1639 198 48 54 chr5 72705665 72705717 -126924433 - MLT1D LTR MaLR -432 73 22 506 142 34 11 chr5 72767109 72767285 -126862865 + (TA)n Simple_repeat Simple_repeat 1 180 0 1757 150 37 34 chr5 72768391 72768745 -126861405 + THE1B LTR MaLR 9 363 -1 692 37 9 28 chr5 72768933 72769040 -126861110 + (GGAA)n Simple_repeat Simple_repeat 1 105 0 2226 165 45 5 chr5 72769686 72770110 -126860040 + L1MB2 LINE L1 5728 6168 -3 22 35 0 0 chr5 72770111 72770140 -126860010 + AT_rich Low_complexity Low_complexity 1 29 0 259 266 21 53 chr5 72770442 72770536 -126859614 - MIR SINE MIR -126 136 46 22 35 0 0 chr5 72773375 72773404 -126856746 + AT_rich Low_complexity Low_complexity 1 29 0 394 127 45 75 chr5 72773656 72773790 -126856360 - L1 LINE L1 -3386 3402 3273 5128 158 26 30 chr5 72773815 72775181 -126854969 - L1 LINE L1 -4188 2601 1249 3311 121 9 11 chr5 72775413 72775952 -126854198 + L1PB1 LINE L1 5614 6151 0 229 310 64 32 chr5 72776116 72776303 -126853847 + L1M4 LINE L1 3730 3922 -2224 21 36 0 0 chr5 72776304 72776332 -126853818 + AT_rich Low_complexity Low_complexity 1 28 0 502 114 0 11 chr5 72776341 72776429 -126853721 - L1PB4 LINE L1 -2 6154 6068 21 36 0 0 chr5 72777065 72777093 -126853057 + AT_rich Low_complexity Low_complexity 1 28 0 395 181 56 0 chr5 72777490 72777599 -126852551 + MER61E LTR ERV1 1 118 -484 23 0 0 0 chr5 72779345 72779368 -126850782 + AT_rich Low_complexity Low_complexity 1 23 0 295 174 29 29 chr5 72779893 72779978 -126850172 + L1ME1 LINE L1 6007 6078 -88 313 288 61 49 chr5 72780093 72780256 -126849894 + HAL1b LINE L1 152 316 -1032 2435 172 37 2 chr5 72780406 72780889 -126849261 + L1MB1 LINE L1 5669 6168 0 262 59 0 0 chr5 72781341 72781447 -126848703 - Alu SINE Alu 0 353 248 2044 130 60 20 chr5 72781765 72782112 -126848038 - THE1B LTR MaLR -1 363 3 6127 112 25 14 chr5 72782114 72783077 -126847073 - THE1B-int LTR MaLR 0 1580 608 522 82 0 0 chr5 72783185 72783258 -126846892 + THE1B LTR MaLR 292 364 0 22 35 0 0 chr5 72783308 72783337 -126846813 + AT_rich Low_complexity Low_complexity 1 29 0 489 312 89 48 chr5 72783363 72783777 -126846373 + L3 LINE CR1 564 994 -583 225 132 0 0 chr5 72784023 72784061 -126846089 + (TAA)n Simple_repeat Simple_repeat 1 38 0 513 32 0 0 chr5 72784107 72784170 -126845980 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 1363 152 115 37 chr5 72784170 72784519 -126845631 - MSTA LTR MaLR -3 425 50 2458 74 0 3 chr5 72787901 72788212 -126841938 - AluY SINE Alu 0 311 2 566 192 8 17 chr5 72788448 72788568 -126841582 - FLAM_C SINE Alu -18 125 7 396 267 10 45 chr5 72788812 72789014 -126841136 - L1M4 LINE L1 -860 5286 5092 6381 133 10 21 chr5 72789103 72790413 -126839737 + L1MA1 LINE L1 5016 6302 0 540 279 38 4 chr5 72790433 72790673 -126839477 - L1M4 LINE L1 -1055 5091 4844 206 345 62 18 chr5 72791052 72791165 -126838985 + L2 LINE L2 3195 3312 -1 219 298 36 12 chr5 72792052 72792136 -126838014 + MIR SINE MIR 106 191 -71 303 310 0 20 chr5 72793360 72793460 -126836690 + L2 LINE L2 2652 2749 -565 767 225 42 135 chr5 72793960 72794025 -126836125 - MLT1A1 LTR MaLR -2 363 294 1662 103 8 0 chr5 72794025 72794267 -126835883 - L1PB1 LINE L1 -2 6149 5906 767 225 42 135 chr5 72794267 72794601 -126835549 - MLT1A1 LTR MaLR -71 294 1 561 164 9 60 chr5 72797894 72798010 -126832140 - MLT1A2 LTR MaLR -264 110 1 1587 171 30 24 chr5 72798066 72798364 -126831786 - AluJb SINE Alu -12 300 1 314 276 83 61 chr5 72800006 72800187 -126829963 + L2 LINE L2 2670 2854 -460 214 143 143 0 chr5 72800695 72800744 -126829406 + L2 LINE L2 3217 3272 0 883 271 134 35 chr5 72801659 72802113 -126828037 - LTR33 LTR ERVL -1 520 22 421 248 210 19 chr5 72802617 72802806 -126827344 - MIR SINE MIR -9 253 27 217 333 86 0 chr5 72802956 72803037 -126827113 - L2 LINE L2 -13 3300 3213 268 286 42 76 chr5 72803594 72803637 -126826513 - L2 LINE L2 0 3313 3270 2135 201 71 61 chr5 72803637 72804145 -126826005 + MER67D LTR ERV1 1 513 -1 268 286 42 76 chr5 72804145 72804220 -126825930 - L2 LINE L2 -43 3270 3199 1995 128 131 3 chr5 72804293 72804637 -126825513 - MSTA LTR MaLR 0 428 41 528 332 39 55 chr5 72805458 72805822 -126824328 + L2 LINE L2 2930 3287 -26 206 326 46 80 chr5 72806470 72806645 -126823505 - L2 LINE L2 -845 2469 2301 234 128 0 0 chr5 72807469 72807508 -126822642 + (TATG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr5 72807597 72807625 -126822525 + AT_rich Low_complexity Low_complexity 1 28 0 226 354 155 18 chr5 72808147 72808373 -126821777 - L2 LINE L2 -543 2771 2515 326 322 60 41 chr5 72808427 72808694 -126821456 + L1MDb LINE L1 1146 1417 -4992 450 298 14 39 chr5 72808728 72808850 -126821300 + L1MDb LINE L1 1585 1709 -4878 1444 176 53 14 chr5 72808850 72809134 -126821016 - AluJo SINE Alu -17 295 1 450 298 14 39 chr5 72809134 72809293 -126820857 + L1MDb LINE L1 1709 1859 -4728 271 277 36 24 chr5 72809389 72809472 -126820678 - Charlie6 DNA MER1_type -39 3461 3378 19371 46 16 4 chr5 72809612 72812695 -126817455 - L1P LINE L1 -2686 3460 211 20997 39 1 24 chr5 72812806 72815582 -126814568 - L1P LINE L1 -954 5192 2480 1058 52 41 23 chr5 72815578 72815750 -126814400 + L1P LINE L1 4343 4517 -1629 * 308 280 153 8 chr5 72816057 72816175 -126813975 - MER5A DNA MER1_type -1 188 54 1138 68 0 0 chr5 72816218 72816364 -126813786 + L1PA13 LINE L1 6014 6159 -4 1922 123 40 3 chr5 72816384 72816624 -126813526 - L1MA4A LINE L1 -3 6300 6045 207 0 0 0 chr5 72816624 72816647 -126813503 + (TCTA)n Simple_repeat Simple_repeat 2 24 0 1922 123 40 3 chr5 72816647 72816707 -126813443 - L1MA4A LINE L1 -258 6045 5989 227 333 49 62 chr5 72817623 72817785 -126812365 + MIR SINE MIR 33 192 -70 2281 97 0 3 chr5 72817810 72818108 -126812042 + AluSq SINE Alu 1 297 -16 201 352 80 0 chr5 72819630 72819718 -126810432 - L2 LINE L2 -29 3243 3149 2512 57 0 0 chr5 72820538 72820836 -126809314 + AluY SINE Alu 1 298 -13 242 242 47 62 chr5 72820897 72821025 -126809125 + L1MDb LINE L1 1807 1932 -4655 607 284 44 20 chr5 72821210 72821506 -126808644 + L1MDb LINE L1 2450 2752 -3654 459 284 7 37 chr5 72821582 72821878 -126808272 + L1MDb LINE L1 3304 3590 -2816 227 362 43 0 chr5 72822026 72822120 -126808030 - L2 LINE L2 -5 3267 3170 24 32 0 0 chr5 72822468 72822499 -126807651 + AT_rich Low_complexity Low_complexity 1 31 0 8108 205 51 47 chr5 72824411 72824841 -126805309 - L1M3 LINE L1 -610 5558 5131 792 69 0 0 chr5 72824841 72824943 -126805207 - L1PA13 LINE L1 -2 6161 6060 8108 205 51 47 chr5 72824943 72827061 -126803089 - L1M3 LINE L1 -1037 5131 2969 310 349 28 47 chr5 72827504 72827759 -126802391 - L1M4 LINE L1 -2157 3989 3740 35437 44 43 2 chr5 72827874 72832469 -126797681 + L1P LINE L1 1 4786 -1360 5780 205 8 1 chr5 72832783 72833974 -126796176 - L1 LINE L1 -966 5180 3982 1992 109 0 0 chr5 72834137 72834393 -126795757 - AluSc SINE Alu -18 291 36 1196 186 4 25 chr5 72834400 72834636 -126795514 - AluJo SINE Alu -80 232 2 309 313 179 0 chr5 72834776 72834888 -126795262 - MLT1G3 LTR MaLR 0 595 464 442 193 45 0 chr5 72834927 72835015 -126795135 - MLT1G3 LTR MaLR -222 308 217 2358 135 16 42 chr5 72835278 72835663 -126794487 - THE1C LTR MaLR 0 375 1 5244 102 7 7 chr5 72835663 72836381 -126793769 - THE1C-int LTR MaLR 0 1580 863 10781 118 24 34 chr5 72838381 72840969 -126789181 + L1P3 LINE L1 226 2810 -3651 6103 35 0 0 chr5 72840977 72841654 -126788496 - L1PA4 LINE L1 -3 6152 5476 6277 109 31 23 chr5 72841663 72843612 -126786538 - SVA Other Other -518 1386 59 375 23 0 0 chr5 72843617 72843661 -126786489 + (GGGAGA)n Simple_repeat Simple_repeat 6 49 0 24476 35 0 0 chr5 72843662 72846675 -126783475 - L1P2 LINE L1 -664 5491 2480 3888 96 16 0 chr5 72846671 72847234 -126782916 + L1P LINE L1 4343 4914 -1232 * 1508 167 3 100 chr5 72848015 72848247 -126781903 - AluJb SINE Alu -15 297 105 2224 128 0 3 chr5 72848247 72848559 -126781591 - AluSx SINE Alu -1 311 1 1508 167 3 100 chr5 72848559 72848655 -126781495 - AluJb SINE Alu -207 105 1 516 301 126 6 chr5 72850302 72850735 -126779415 - L2 LINE L2 -284 3029 2538 470 311 56 25 chr5 72851096 72851292 -126778858 - MIR SINE MIR -48 214 13 345 47 0 0 chr5 72853906 72853949 -126776201 + (TG)n Simple_repeat Simple_repeat 1 43 0 213 39 0 0 chr5 72853948 72853974 -126776176 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 2111 152 0 0 chr5 72854951 72855261 -126774889 - AluJb SINE Alu 0 312 3 1663 177 10 20 chr5 72855477 72855771 -126774379 - AluJo SINE Alu -21 291 1 619 273 84 59 chr5 72856445 72856767 -126773383 - L1M4 LINE L1 -2273 3873 3544 710 233 83 33 chr5 72857223 72857275 -126772875 + MIR SINE MIR 9 57 -205 2252 131 16 49 chr5 72857275 72857663 -126772487 - THE1C LTR MaLR 0 375 1 710 233 83 33 chr5 72857663 72857790 -126772360 + MIR SINE MIR 57 197 -65 372 235 141 59 chr5 72858584 72858697 -126771453 + MIR SINE MIR 58 191 -71 835 130 0 30 chr5 72858697 72858828 -126771322 + FLAM_C SINE Alu 1 127 -6 372 235 141 59 chr5 72858828 72858884 -126771266 + MIR SINE MIR 191 241 -21 2206 118 3 3 chr5 72860042 72860348 -126769802 + AluSx SINE Alu 1 306 -6 473 225 42 63 chr5 72861976 72862118 -126768032 - MER5B DNA MER1_type -6 172 34 271 235 41 51 chr5 72862296 72862394 -126767756 - Charlie8 DNA MER1_type -2249 168 72 315 299 43 8 chr5 72862830 72862947 -126767203 + MIR SINE MIR 71 191 -71 783 98 27 9 chr5 72863448 72863560 -126766590 - AluSp SINE Alu -163 150 37 493 260 71 90 chr5 72863576 72863942 -126766208 - L1M4 LINE L1 -1028 5118 4760 283 240 116 39 chr5 72864030 72864159 -126765991 - L1ME3A LINE L1 -24 6146 6008 575 265 94 2 chr5 72864630 72864865 -126765285 + L1MC4a LINE L1 5594 5847 -351 551 289 25 55 chr5 72867091 72867326 -126762824 - L2 LINE L2 -12 3301 3074 491 253 5 89 chr5 72868884 72869074 -126761076 + MLT1I LTR MaLR 236 409 0 901 242 92 107 chr5 72869094 72869681 -126760469 - MLT1E LTR MaLR -1 592 15 209 288 34 0 chr5 72870683 72870742 -126759408 - MIR SINE MIR -41 221 161 255 287 21 53 chr5 72870857 72870951 -126759199 + MIR SINE MIR 46 136 -126 891 244 23 9 chr5 72871439 72871656 -126758494 - AluJo SINE Alu -92 220 1 708 213 109 11 chr5 72871683 72871866 -126758284 + L2 LINE L2 2249 2449 -865 6337 81 6 20 chr5 72871895 72872807 -126757343 - L1PA7 LINE L1 -2 6152 5254 7630 75 26 1 chr5 72872919 72874340 -126755810 - L1P3 LINE L1 -432 5722 4270 186 320 64 32 chr5 72875106 72875231 -126754919 - MIR3 SINE MIR -18 190 62 21 0 0 0 chr5 72875375 72875396 -126754754 + AT_rich Low_complexity Low_complexity 1 21 0 1500 285 101 45 chr5 72877004 72878472 -126751678 - L1ME3A LINE L1 -777 5369 4096 1195 284 54 0 chr5 72878445 72878815 -126751335 + L1M4 LINE L1 2486 2875 -3271 * 402 299 50 10 chr5 72878955 72879150 -126751000 + L1ME LINE L1 5641 5846 -320 5735 133 62 1 chr5 72879150 72880024 -126750126 + Tigger1 DNA MER2_type 1 927 -1491 453 231 34 17 chr5 72880133 72880250 -126749900 + L2 LINE L2 3189 3307 -6 258 81 0 0 chr5 72880262 72880299 -126749851 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 222 37 0 0 chr5 72880356 72880383 -126749767 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1394 206 14 14 chr5 72880385 72880667 -126749483 - AluJb SINE Alu -30 282 1 332 358 55 31 chr5 72881316 72881573 -126748577 + HAL1 LINE L1 1134 1396 -1111 465 263 22 18 chr5 72881733 72882003 -126748147 - L1M3 LINE L1 -776 5370 5191 1337 218 44 83 chr5 72882016 72882451 -126747699 - MER34 LTR ERV1 -124 418 1 622 214 97 32 chr5 72882451 72882605 -126747545 + HsTC2 DNA Tc2 1280 1619 -279 3458 132 24 19 chr5 72882867 72883451 -126746699 + MER50 LTR ERV1 125 711 -23 350 282 73 15 chr5 72883574 72883780 -126746370 - L1M4c LINE L1 -4840 1544 1327 1531 140 0 21 chr5 72883783 72884026 -126746124 - AluJb SINE Alu -17 295 58 188 336 142 0 chr5 72884034 72884147 -126746003 + L2 LINE L2 2595 2723 -591 459 316 21 31 chr5 72884156 72884349 -126745801 + MLT1J LTR MaLR 261 451 -60 216 265 0 0 chr5 72884420 72884469 -126745681 + L2 LINE L2 2926 2974 -298 866 170 0 15 chr5 72885448 72885583 -126744567 - FLAM_C SINE Alu 0 133 1 1827 134 54 7 chr5 72885594 72885892 -126744258 - AluSq SINE Alu -1 312 1 2186 92 7 0 chr5 72886419 72886701 -126743449 + AluSc SINE Alu 1 284 -25 423 0 0 0 chr5 72886711 72886758 -126743392 + (TAAAA)n Simple_repeat Simple_repeat 4 50 0 858 91 0 0 chr5 72889325 72889446 -126740704 + (CCCCCT)n Simple_repeat Simple_repeat 2 122 0 1333 199 0 30 chr5 72889466 72889732 -126740418 - AluJo SINE Alu -8 304 47 1737 173 13 61 chr5 72890173 72890548 -126739602 - MLT1A2 LTR MaLR 0 374 18 303 292 34 0 chr5 72890976 72891065 -126739085 + MER5B DNA MER1_type 29 120 -58 261 277 16 13 chr5 72891800 72891954 -126738196 + L1P5 LINE L1 5280 5431 -720 24 53 0 0 chr5 72892126 72892164 -126737986 + AT_rich Low_complexity Low_complexity 1 38 0 1528 241 9 3 chr5 72892449 72892781 -126737369 - MER58B DNA MER1_type -6 335 2 603 118 9 82 chr5 72893520 72893630 -126736520 + AluJo SINE Alu 35 136 -176 398 321 50 7 chr5 72894275 72894415 -126735735 + MER5A DNA MER1_type 43 188 -1 5224 25 3 5 chr5 72895827 72896461 -126733689 - L1P LINE L1 -743 5403 4771 * 5852 27 3 8 chr5 72896454 72897186 -126732964 + L1P LINE L1 3075 3802 -2344 807 237 84 0 chr5 72897743 72897933 -126732217 - MER63A DNA MER1_type 0 210 5 21 36 0 0 chr5 72898290 72898318 -126731832 + AT_rich Low_complexity Low_complexity 1 28 0 449 349 53 28 chr5 72898613 72899046 -126731104 - L1M4 LINE L1 -1189 4957 4514 965 113 0 21 chr5 72899414 72899555 -126730595 - AluJb SINE Alu -174 138 1 912 237 9 40 chr5 72899558 72899786 -126730364 - MIR SINE MIR -2 260 40 1148 302 52 19 chr5 72900035 72900555 -126729595 + HERV16 LTR ERVL 1599 2134 -2952 2071 208 15 28 chr5 72900665 72901136 -126729014 + L1MC/D LINE L1 4528 4992 -1154 650 158 8 63 chr5 72901141 72901268 -126728882 + FLAM_A SINE Alu 9 128 -14 1536 182 70 36 chr5 72901270 72901825 -126728325 + L1MC/D LINE L1 4987 5562 -644 1020 142 0 151 chr5 72902141 72902238 -126727912 + AluJb SINE Alu 1 42 -270 1858 125 0 52 chr5 72902238 72902567 -126727583 + AluSx SINE Alu 1 312 0 1020 142 0 151 chr5 72902567 72902708 -126727442 + AluJb SINE Alu 42 203 -109 262 232 54 80 chr5 72902807 72902919 -126727231 + MIR SINE MIR 2 110 -152 330 340 53 0 chr5 72903442 72903536 -126726614 - L2 LINE L2 -40 3232 3134 3190 201 48 15 chr5 72903686 72904414 -126725736 + L1ME2 LINE L1 5335 6086 -78 884 230 22 0 chr5 72904414 72904592 -126725558 + MLT1E LTR MaLR 1 182 -411 1901 88 30 42 chr5 72904592 72904922 -126725228 - L1PA7 LINE L1 -2 6152 5827 1106 292 60 16 chr5 72905770 72906201 -126723949 - ERVL LTR ERVL -2359 2637 2188 1572 198 320 7 chr5 72906204 72906775 -126723375 - LTR50 LTR ERVL -25 770 21 2009 76 32 12 chr5 72907018 72907339 -126722811 - L1PA7 LINE L1 -326 5828 5512 470 259 18 21 chr5 72907374 72907519 -126722631 + MLT1E LTR MaLR 279 426 -198 580 297 71 22 chr5 72907589 72907858 -126722292 + MLT1I LTR MaLR 5 286 -123 * 675 284 30 10 chr5 72907854 72908051 -126722099 + MLT1I LTR MaLR 191 391 -18 361 176 54 0 chr5 72909144 72909218 -126720932 + L1ME LINE L1 5401 5478 -684 262 270 6 145 chr5 72909215 72909374 -126720776 + L1ME3 LINE L1 5437 5573 -593 * 1550 261 40 42 chr5 72909376 72909806 -126720344 - LTR16A LTR ERVL -3 447 19 332 239 62 71 chr5 72910321 72910434 -126719716 + L1ME3 LINE L1 5828 5939 -225 442 366 6 0 chr5 72910435 72910607 -126719543 - ERVL LTR ERVL -870 4894 4722 787 319 73 32 chr5 72910772 72911180 -126718970 - ERVL LTR ERVL -1201 4453 4029 12268 68 15 1 chr5 72911312 72912835 -126717315 + HERVL LTR ERVL 2882 4426 -1228 10033 188 18 16 chr5 72912949 72914964 -126715186 - L1M2 LINE L1 -4298 2491 479 916 256 180 53 chr5 72915088 72915648 -126714502 + L1ME4a LINE L1 5271 5758 -363 180 0 0 0 chr5 72915648 72915668 -126714482 + (TAAAA)n Simple_repeat Simple_repeat 5 24 0 916 256 180 53 chr5 72915668 72915773 -126714377 + L1ME4a LINE L1 5758 5848 -273 2831 111 49 2 chr5 72915773 72916180 -126713970 - MSTA LTR MaLR -1 427 2 916 256 180 53 chr5 72916180 72916268 -126713882 + L1ME4a LINE L1 5848 6121 0 204 98 49 98 chr5 72917574 72917635 -126712515 + A-rich Low_complexity Low_complexity 2 59 0 227 333 33 0 chr5 72917805 72917849 -126712301 - MIR SINE MIR -63 199 158 612 63 13 0 chr5 72917849 72917928 -126712222 - MADE1 DNA Mariner 0 80 1 227 333 33 0 chr5 72917928 72917973 -126712177 - MIR SINE MIR -104 158 107 977 241 74 97 chr5 72918303 72918664 -126711486 + MER34 LTR ERV1 1 346 -196 2551 53 0 0 chr5 72918664 72918963 -126711187 + AluY SINE Alu 1 299 -12 977 241 74 97 chr5 72918963 72919156 -126710994 + MER34 LTR ERV1 346 542 0 1956 134 27 0 chr5 72919226 72919525 -126710625 + MER7A DNA MER2_type 1 305 -41 244 250 105 0 chr5 72919539 72919615 -126710535 - MIR SINE MIR -27 235 152 297 89 22 0 chr5 72919619 72919664 -126710486 + MADE1 DNA Mariner 1 46 -34 730 240 0 0 chr5 72919664 72919810 -126710340 - MIR SINE MIR -115 147 2 2055 98 0 0 chr5 72920308 72920573 -126709577 + AluSg SINE Alu 37 301 -9 949 158 39 88 chr5 72920915 72921175 -126708975 + L1MA7 LINE L1 6043 6289 -2 2627 53 0 0 chr5 72921916 72922220 -126707930 + AluY SINE Alu 1 304 -7 288 296 108 43 chr5 72922343 72922529 -126707621 + MIR SINE MIR 15 212 -50 225 0 0 0 chr5 72924474 72924499 -126705651 + (TG)n Simple_repeat Simple_repeat 2 26 0 2108 179 63 20 chr5 72924502 72924949 -126705201 - MLT1C LTR MaLR 0 467 2 2981 90 27 2 chr5 72925527 72925939 -126704211 - L1MA2 LINE L1 0 6304 5883 243 0 0 0 chr5 72925946 72925973 -126704177 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2177 108 0 0 chr5 72925974 72926253 -126703897 - AluSx SINE Alu -33 279 1 257 290 200 0 chr5 72926253 72926353 -126703797 - L1MC/D LINE L1 -2069 5739 5620 21 36 0 0 chr5 72929423 72929451 -126700699 + AT_rich Low_complexity Low_complexity 1 28 0 1361 282 41 31 chr5 72929531 72930014 -126700136 + LTR16C LTR ERVL 1 488 -3 198 0 0 0 chr5 72930046 72930068 -126700082 + (TC)n Simple_repeat Simple_repeat 1 22 0 1366 156 39 67 chr5 72930072 72930354 -126699796 - AluJb SINE Alu -38 274 1 7276 66 9 7 chr5 72931676 72933178 -126696972 + L1PA7 LINE L1 4648 6154 0 201 248 74 94 chr5 72933764 72933913 -126696237 + L3 LINE CR1 1192 1337 -240 745 284 155 30 chr5 72934070 72934471 -126695679 + L2 LINE L2 2495 2945 -369 23 0 0 0 chr5 72934647 72934670 -126695480 + AT_rich Low_complexity Low_complexity 1 23 0 353 301 21 0 chr5 72936116 72936209 -126693941 + L2 LINE L2 3214 3308 -5 900 213 62 20 chr5 72937109 72937353 -126692797 - MIR SINE MIR -1 261 8 621 270 152 17 chr5 72937482 72937712 -126692438 - MIR SINE MIR 0 262 2 465 19 0 0 chr5 72938431 72938485 -126691665 + (CAG)n Simple_repeat Simple_repeat 1 54 0 321 26 0 0 chr5 72938642 72938680 -126691470 + (CA)n Simple_repeat Simple_repeat 1 38 0 1858 145 21 74 chr5 72938690 72938924 -126691226 - MER2 DNA MER2_type -25 320 108 2000 71 0 45 chr5 72938924 72939193 -126690957 - L1PA5 LINE L1 0 6154 5898 1858 145 21 74 chr5 72939193 72939296 -126690854 - MER2 DNA MER2_type -237 108 1 234 0 0 0 chr5 72939808 72939834 -126690316 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 261 0 0 0 chr5 72939833 72939862 -126690288 + (TG)n Simple_repeat Simple_repeat 1 29 0 278 216 64 0 chr5 72940564 72940689 -126689461 + (TA)n Simple_repeat Simple_repeat 1 133 0 281 208 14 0 chr5 72941855 72941927 -126688223 + CT-rich Low_complexity Low_complexity 3 75 0 297 296 72 0 chr5 72943072 72943197 -126686953 - MIR SINE MIR -6 256 123 252 312 117 78 chr5 72943416 72943647 -126686503 + L2 LINE L2 3031 3270 -2 456 261 45 60 chr5 72943690 72943889 -126686261 + MIR3 SINE MIR 7 202 -6 12446 95 18 11 chr5 72944235 72946690 -126683460 + L1PA14 LINE L1 3683 6161 0 865 218 92 0 chr5 72946691 72946930 -126683220 - L1M4 LINE L1 -3270 2876 2616 2271 97 0 3 chr5 72946939 72947239 -126682911 - AluSx SINE Alu -13 299 1 258 255 82 20 chr5 72947360 72947458 -126682692 + L1ME4a LINE L1 6018 6121 0 189 103 0 0 chr5 72947494 72947523 -126682627 - L2 LINE L2 -219 3053 3025 21 0 0 0 chr5 72947654 72947675 -126682475 + AT_rich Low_complexity Low_complexity 1 21 0 201 250 0 0 chr5 72949517 72949561 -126680589 + CT-rich Low_complexity Low_complexity 2 45 0 305 308 95 11 chr5 72949733 72949925 -126680225 - L1ME3 LINE L1 -260 5902 5698 282 281 0 0 chr5 72949924 72950006 -126680144 - L1ME3 LINE L1 -2088 4058 3977 * 1062 108 23 40 chr5 72950008 72950184 -126679966 + L1PA16 LINE L1 5994 6166 0 1875 146 10 32 chr5 72952620 72952928 -126677222 - AluJb SINE Alu -11 301 1 1150 273 95 16 chr5 72952937 72953469 -126676681 + L2 LINE L2 2733 3301 -12 582 299 84 0 chr5 72954198 72954412 -126675738 + MIR SINE MIR 14 245 -17 487 309 53 0 chr5 72955852 72956004 -126674146 - MIR SINE MIR -70 192 33 837 276 143 29 chr5 72956231 72956651 -126673499 + L2 LINE L2 2842 3309 -4 1414 192 0 8 chr5 72956818 72957088 -126673062 + AluJo SINE Alu 35 302 0 803 202 50 61 chr5 72957095 72957293 -126672857 + MIR SINE MIR 57 252 -10 248 198 173 62 chr5 72957505 72957586 -126672564 - L2 LINE L2 -5 3308 3219 21 36 0 0 chr5 72957597 72957625 -126672525 + AT_rich Low_complexity Low_complexity 1 28 0 229 266 13 38 chr5 72958700 72958779 -126671371 - MIR3 SINE MIR -26 182 106 516 298 84 17 chr5 72959934 72960112 -126670038 - MIR SINE MIR -71 191 2 564 248 8 8 chr5 72960893 72961026 -126669124 - L2 LINE L2 -1 3312 3180 327 259 46 9 chr5 72961784 72961892 -126668258 + L1MC4a LINE L1 5732 5843 -1965 3017 162 25 46 chr5 72962401 72962742 -126667408 - L1MB7 LINE L1 -27 6157 5835 2261 89 0 13 chr5 72962742 72963044 -126667106 - AluSg SINE Alu -12 298 1 3017 162 25 46 chr5 72963044 72963351 -126666799 - L1MB7 LINE L1 -349 5835 5523 807 233 132 22 chr5 72963467 72963861 -126666289 + MLT1F LTR MaLR 81 547 -48 1095 105 43 0 chr5 72963861 72964023 -126666127 + MER41B LTR ERV1 1 169 -466 6284 89 28 30 chr5 72964023 72965113 -126665037 + L1PB1 LINE L1 5062 6149 -2 2555 116 0 3 chr5 72965201 72965563 -126664587 + MER41B LTR ERV1 177 537 -98 3248 108 11 11 chr5 72965663 72966116 -126664034 + LTR8 LTR ERV1 239 691 0 804 232 176 23 chr5 72966121 72966418 -126663732 - LTR33 LTR ERVL -112 409 48 2200 200 62 73 chr5 72966418 72966978 -126663172 - MLT2B3 LTR ERVL 0 554 1 804 232 176 23 chr5 72966978 72967033 -126663117 - LTR33 LTR ERVL -473 48 3 280 188 0 0 chr5 72967053 72967101 -126663049 + MLT1L LTR MaLR 348 395 -220 1379 188 109 29 chr5 72967248 72967261 -126662889 - MER88 LTR ERVL -1 463 452 4566 137 18 38 chr5 72967261 72967996 -126662154 + MER72 LTR ERV1 1 720 -2 1379 188 109 29 chr5 72967996 72968322 -126661828 - MER88 LTR ERVL -12 452 97 228 255 235 0 chr5 72968761 72968859 -126661291 - LTR16A LTR ERVL -305 145 25 1856 247 54 12 chr5 72968891 72969367 -126660783 + L1ME3 LINE L1 5593 6094 -68 189 107 0 0 chr5 72969367 72969395 -126660755 + (TG)n Simple_repeat Simple_repeat 2 29 0 1856 247 54 12 chr5 72969395 72969437 -126660713 + L1ME3 LINE L1 6094 6133 -29 1898 139 10 10 chr5 72969489 72969783 -126660367 + AluJb SINE Alu 3 296 -16 226 252 221 15 chr5 72970442 72970573 -126659577 + MIR SINE MIR 83 240 -22 489 165 156 0 chr5 72971531 72971640 -126658510 + AluSq/x SINE Alu 2 127 -186 1921 299 53 17 chr5 72971784 72972316 -126657834 - MER115 DNA AcHobo -104 589 39 301 55 73 0 chr5 72974053 72974108 -126656042 - Alu SINE Alu 0 308 250 499 270 52 23 chr5 72974722 72974896 -126655254 + MIR SINE MIR 63 241 -21 * 770 233 148 5 chr5 72974872 72975082 -126655068 - MIR SINE MIR -21 241 2 505 183 0 11 chr5 72976492 72976585 -126653565 + L1MB8 LINE L1 4916 5007 -1139 1858 205 46 56 chr5 72976585 72976660 -126653490 + MLT1D LTR MaLR 1 75 -430 1814 187 41 85 chr5 72976660 72977121 -126653029 + LTR47B LTR ERVL 3 443 0 1858 205 46 56 chr5 72977121 72977548 -126652602 + MLT1D LTR MaLR 75 498 -7 4762 164 26 28 chr5 72977552 72978689 -126651461 + L1MB8 LINE L1 5004 6142 -36 829 88 72 0 chr5 72978690 72978815 -126651335 + MLT1A1 LTR MaLR 1 134 -231 22 0 0 0 chr5 72979452 72979474 -126650676 + AT_rich Low_complexity Low_complexity 1 22 0 1874 145 7 14 chr5 72979651 72979940 -126650210 + AluJb SINE Alu 6 292 -20 457 308 0 0 chr5 72980357 72980464 -126649686 - L2 LINE L2 -6 3266 3160 737 266 29 7 chr5 72980518 72980723 -126649427 - MIR SINE MIR -38 224 18 732 108 68 88 chr5 72980918 72981066 -126649084 - SVA Other Other -1179 207 63 335 22 0 22 chr5 72981076 72981121 -126649029 + (GGGAGA)n Simple_repeat Simple_repeat 6 49 0 24197 34 0 3 chr5 72981122 72984142 -126646008 - L1P2 LINE L1 -664 5491 2480 657 65 32 48 chr5 72984138 72984262 -126645888 + L1P LINE L1 4343 4464 -1682 * 1900 116 4 0 chr5 72984375 72984633 -126645517 + AluSq SINE Alu 54 312 -1 2356 104 0 0 chr5 72984827 72985135 -126645015 - AluSg SINE Alu -2 308 1 1295 168 4 0 chr5 72985199 72985425 -126644725 + L1MA4 LINE L1 6069 6295 -5 2532 131 19 3 chr5 72986053 72986412 -126643738 - MLT1A1 LTR MaLR 0 365 1 10772 195 30 11 chr5 72987466 72987588 -126642562 - L1 LINE L1 -2986 3862 3744 1703 176 3 36 chr5 72987588 72987895 -126642255 - AluJo SINE Alu -15 297 1 10772 195 30 11 chr5 72987895 72988018 -126642132 - L1 LINE L1 -3104 3744 3625 2085 119 0 3 chr5 72988018 72988304 -126641846 - AluY SINE Alu -8 303 19 10772 195 30 11 chr5 72988304 72991003 -126639147 - L1 LINE L1 -3223 3625 860 1059 240 95 49 chr5 72991747 72992138 -126638012 - MLT1J1 LTR MaLR -19 427 19 535 296 199 0 chr5 72992316 72992522 -126637628 - MIR SINE MIR -12 250 4 292 276 209 0 chr5 72994073 72994178 -126635972 - L1M4 LINE L1 -1907 4239 4113 1033 214 52 43 chr5 72994240 72994997 -126635153 - L1ME1 LINE L1 -7 6954 6068 2244 125 3 0 chr5 72994997 72995309 -126634841 - AluSq SINE Alu 0 313 1 1033 214 52 43 chr5 72995309 72995665 -126634485 - L1ME1 LINE L1 -893 6068 5716 1482 177 42 35 chr5 72995810 72996098 -126634052 - MER21B LTR ERV1 -555 308 19 493 250 0 0 chr5 72996105 72996201 -126633949 - MER21B LTR ERV1 -767 96 1 4831 230 41 29 chr5 72996204 72997598 -126632552 - L1ME1 LINE L1 -1209 5732 4323 741 199 7 14 chr5 72997599 72997745 -126632405 - MLT1F LTR MaLR -9 533 389 577 261 75 25 chr5 72997757 72997998 -126632152 - L1ME1 LINE L1 -4739 2202 1950 381 22 0 0 chr5 72998004 72998050 -126632100 + (TG)n Simple_repeat Simple_repeat 2 47 0 375 289 20 7 chr5 72998072 72998224 -126631926 - L1ME1 LINE L1 -5187 1754 1601 634 226 32 51 chr5 72998250 72998401 -126631749 - L1ME1 LINE L1 -5004 1419 1272 2357 221 72 30 chr5 72998401 72998970 -126631180 + MLT1E LTR MaLR 1 593 0 634 226 32 51 chr5 72998970 72999035 -126631115 - L1ME1 LINE L1 -5151 1272 1207 464 281 23 8 chr5 72999038 72999166 -126630984 - MER5B DNA MER1_type -46 132 3 463 258 55 31 chr5 73000468 73000596 -126629554 + MIR SINE MIR 5 135 -127 245 271 0 17 chr5 73000578 73000637 -126629513 + L2 LINE L2 3197 3254 -18 * 1060 203 5 29 chr5 73000930 73001137 -126629013 + MLT1E LTR MaLR 377 578 -15 189 107 0 0 chr5 73002639 73002667 -126627483 + (CCCCCA)n Simple_repeat Simple_repeat 5 32 0 359 220 90 70 chr5 73002964 73003064 -126627086 - L1ME1 LINE L1 -6271 851 413 665 229 136 69 chr5 73003553 73003929 -126626221 + L1ME4a LINE L1 5524 5924 -197 1748 149 10 27 chr5 73005102 73005398 -126624752 - AluJo SINE Alu -21 291 1 207 69 0 0 chr5 73005568 73005597 -126624553 + (TG)n Simple_repeat Simple_repeat 1 29 0 943 202 19 14 chr5 73005743 73005956 -126624194 + MIR SINE MIR 18 231 -31 210 236 0 0 chr5 73006590 73006645 -126623505 + (TG)n Simple_repeat Simple_repeat 2 56 0 361 36 36 0 chr5 73007336 73007391 -126622759 + (GA)n Simple_repeat Simple_repeat 2 58 0 489 220 25 0 chr5 73007817 73007976 -126622174 + CT-rich Low_complexity Low_complexity 2 164 0 2511 207 61 33 chr5 73008144 73008753 -126621397 - MLT1E2 LTR MaLR 0 626 1 197 227 76 15 chr5 73008990 73009056 -126621094 - MIR3 SINE MIR -52 156 87 2554 86 22 14 chr5 73009186 73009547 -126620603 - THE1B LTR MaLR 0 364 1 337 186 0 17 chr5 73010966 73011025 -126619125 + MLT1L LTR MaLR 7 64 -551 707 306 17 4 chr5 73011086 73011321 -126618829 + MIR SINE MIR 22 259 -3 2173 121 44 0 chr5 73011322 73011620 -126618530 - AluSx SINE Alu -1 311 1 279 264 14 0 chr5 73011663 73011735 -126618415 + MLT1L LTR MaLR 192 264 -351 1855 151 7 0 chr5 73012376 73012654 -126617496 + AluJb SINE Alu 1 280 -32 883 277 82 0 chr5 73012681 73012963 -126617187 - L1MC4a LINE L1 -1866 5942 5638 1336 237 82 26 chr5 73013110 73013527 -126616623 - MLT1J LTR MaLR -2 509 70 22 56 0 0 chr5 73013537 73013573 -126616577 + AT_rich Low_complexity Low_complexity 1 36 0 293 335 80 9 chr5 73014017 73014229 -126615921 - L2 LINE L2 -260 3053 2827 392 332 75 54 chr5 73015220 73015978 -126614172 - L2 LINE L2 -23 3249 2468 2460 80 0 3 chr5 73016156 73016457 -126613693 + AluSq SINE Alu 1 300 -13 214 351 36 0 chr5 73016608 73016719 -126613431 - L2 LINE L2 -1341 1973 1859 586 260 51 11 chr5 73017017 73017194 -126612956 + MIR SINE MIR 1 184 -78 462 278 0 40 chr5 73017203 73017329 -126612821 + L2 LINE L2 3152 3272 0 187 368 24 0 chr5 73018511 73018636 -126611514 - MIR3 SINE MIR -20 188 61 405 221 142 18 chr5 73018764 73018877 -126611273 + MIR SINE MIR 20 146 -62 611 217 89 0 chr5 73018889 73019069 -126611081 - MIR SINE MIR 0 262 67 271 324 45 0 chr5 73019437 73019548 -126610602 - MER5B DNA MER1_type -62 116 1 407 200 56 0 chr5 73020063 73020153 -126609997 + MIR SINE MIR 63 157 -105 506 229 144 0 chr5 73020678 73020831 -126609319 - MIR3 SINE MIR -4 204 30 247 204 0 0 chr5 73021324 73021373 -126608777 - MIR3 SINE MIR -9 199 151 3052 75 70 2 chr5 73021942 73022323 -126607827 + MLT2A1 LTR ERVL 1 414 -30 261 0 0 0 chr5 73022323 73022352 -126607798 + (TA)n Simple_repeat Simple_repeat 2 30 0 3052 75 70 2 chr5 73022352 73022386 -126607764 + MLT2A1 LTR ERVL 414 444 0 17924 70 15 3 chr5 73022386 73024670 -126605480 + HERVL-A1 LTR ERVL 1 2311 -3343 315 194 0 16 chr5 73025413 73025475 -126604675 + MIR3 SINE MIR 111 171 -37 1999 225 60 29 chr5 73026250 73026483 -126603667 - L1M4 LINE L1 -1314 4832 4608 1994 148 0 0 chr5 73026483 73026773 -126603377 - AluSx SINE Alu -22 290 1 1999 225 60 29 chr5 73026773 73027134 -126603016 - L1M4 LINE L1 -1538 4608 4219 3844 177 170 113 chr5 73030450 73031041 -126599109 + L1MD3 LINE L1 6633 7189 -806 416 274 28 0 chr5 73031041 73031147 -126599003 + MLT1F1 LTR MaLR 3 111 -456 3844 177 170 113 chr5 73031147 73031739 -126598411 + L1MD3 LINE L1 7189 7995 0 398 234 91 118 chr5 73031752 73032081 -126598069 + L1ME3A LINE L1 16 335 -6205 281 230 101 66 chr5 73032386 73032584 -126597566 + L1ME3A LINE L1 764 971 -5559 2362 221 141 57 chr5 73032731 73033592 -126596558 + L1ME3A LINE L1 1013 2013 -4527 1965 151 7 0 chr5 73033592 73033884 -126596266 + AluSx SINE Alu 1 294 -18 2362 221 141 57 chr5 73033884 73034273 -126595877 + L1ME3A LINE L1 2013 2368 -4172 610 247 31 62 chr5 73034725 73034777 -126595373 - MIR SINE MIR -29 233 181 252 59 0 0 chr5 73034777 73034811 -126595339 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 610 247 31 62 chr5 73034811 73034985 -126595165 - MIR SINE MIR -81 181 14 2990 101 27 9 chr5 73036893 73037331 -126592819 + MER4C LTR ERV1 20 465 0 2367 106 0 0 chr5 73037369 73037672 -126592478 + AluSg1 SINE Alu 1 303 -6 2438 188 121 11 chr5 73038035 73038562 -126591588 + MER34C LTR ERV1 1 585 0 1944 132 19 0 chr5 73038979 73039290 -126590860 - MER41B LTR ERV1 0 635 319 3958 265 82 56 chr5 73040027 73043204 -126586946 + L1ME3A LINE L1 3272 6537 -27 2509 62 3 3 chr5 73044059 73044367 -126585783 - AluY SINE Alu -3 308 1 299 284 9 26 chr5 73045037 73045153 -126584997 + GA-rich Low_complexity Low_complexity 3 116 0 214 158 0 0 chr5 73045820 73045858 -126584292 - MIR SINE MIR -109 153 116 1917 159 77 3 chr5 73045858 73046198 -126583952 + MLT1A1 LTR MaLR 1 365 0 2272 98 0 29 chr5 73046254 73046569 -126583581 - AluSx SINE Alu -6 306 1 819 156 0 15 chr5 73046597 73046732 -126583418 + Charlie5 DNA MER1_type 1 133 -2479 698 179 8 0 chr5 73046721 73046855 -126583295 + Charlie5 DNA MER1_type 2234 2368 -244 * 904 254 18 4 chr5 73046866 73047094 -126583056 + LTR16A LTR ERVL 216 446 -4 28 0 0 0 chr5 73047101 73047129 -126583021 + AT_rich Low_complexity Low_complexity 1 28 0 619 319 48 16 chr5 73047545 73047859 -126582291 + ERVL LTR ERVL 3764 4087 -1677 6181 142 17 5 chr5 73047995 73049132 -126581018 - L1MA5A LINE L1 -23 6274 5126 263 402 8 0 chr5 73049133 73049250 -126580900 + ERVL LTR ERVL 4313 4430 -1224 207 154 19 19 chr5 73049358 73049410 -126580740 + (TA)n Simple_repeat Simple_repeat 2 53 0 2234 81 3 7 chr5 73049473 73049785 -126580365 + AluY SINE Alu 2 312 0 1757 163 0 37 chr5 73049801 73050124 -126580026 + AluSx SINE Alu 1 312 0 360 289 122 56 chr5 73050162 73050466 -126579684 - HAL1 LINE L1 -1424 1083 760 459 167 46 23 chr5 73052249 73052423 -126577727 + (TCTCTG)n Simple_repeat Simple_repeat 3 180 0 2415 77 0 6 chr5 73052603 73052915 -126577235 + AluY SINE Alu 1 310 -1 303 240 0 0 chr5 73053305 73053409 -126576741 + (TG)n Simple_repeat Simple_repeat 1 104 0 213 94 0 0 chr5 73054852 73054884 -126575266 + (TG)n Simple_repeat Simple_repeat 2 33 0 2498 198 72 16 chr5 73054971 73055482 -126574668 + MLT1F LTR MaLR 1 540 -2 3176 143 0 8 chr5 73055634 73056116 -126574034 - MER66A LTR ERV1 0 478 1 208 250 48 12 chr5 73056458 73056542 -126573608 - MIR SINE MIR -56 206 120 340 183 17 0 chr5 73056579 73056639 -126573511 + MER3 DNA MER1_type 41 101 -108 1567 159 6 72 chr5 73258297 73258483 -126371667 - AluJo SINE Alu 0 312 156 2635 48 0 3 chr5 73258483 73258795 -126371355 - AluY SINE Alu 0 311 1 1567 159 6 72 chr5 73258795 73258941 -126371209 - AluJo SINE Alu -156 156 2 342 318 154 19 chr5 73261238 73261451 -126368699 - MIR SINE MIR -6 256 20 1297 238 46 15 chr5 73261480 73261875 -126368275 - MER113 DNA MER1_type? -45 476 70 410 0 20 0 chr5 73262358 73262408 -126367742 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 180 97 0 0 chr5 73262605 73262636 -126367514 + (A)n Simple_repeat Simple_repeat 1 31 0 195 42 0 0 chr5 73263532 73263556 -126366594 + (TCC)n Simple_repeat Simple_repeat 1 24 0 24 53 0 0 chr5 73265009 73265047 -126365103 + GC_rich Low_complexity Low_complexity 1 38 0 303 271 8 78 chr5 73265835 73265964 -126364186 - MIR SINE MIR -77 185 66 651 175 69 62 chr5 73266342 73266502 -126363648 - L1ME3A LINE L1 -3 6167 6007 199 272 173 0 chr5 73268452 73268533 -126361617 - MIR SINE MIR -67 141 47 228 67 0 0 chr5 73272375 73272405 -126357745 + (GA)n Simple_repeat Simple_repeat 1 30 0 860 164 0 0 chr5 73274461 73274583 -126355567 - FLAM_A SINE Alu -9 124 3 374 258 0 78 chr5 73274693 73274821 -126355329 - L2 LINE L2 -27 3286 3169 896 119 0 0 chr5 73274905 73275023 -126355127 - FLAM_C SINE Alu -25 118 1 181 171 49 24 chr5 73275455 73275496 -126354654 + MIR3 SINE MIR 160 201 -7 1685 161 14 18 chr5 73275777 73276082 -126354068 - AluJb SINE Alu 0 304 1 23 0 0 0 chr5 73276493 73276516 -126353634 + AT_rich Low_complexity Low_complexity 1 23 0 736 270 52 43 chr5 73276537 73276693 -126353457 + MIR SINE MIR 2 162 -100 2424 84 0 7 chr5 73276693 73277001 -126353149 - AluY SINE Alu -5 306 1 736 270 52 43 chr5 73277001 73277074 -126353076 + MIR SINE MIR 162 233 -29 2084 209 96 30 chr5 73277787 73278465 -126351685 - L1MC5 LINE L1 -364 7597 6875 972 280 173 55 chr5 73278463 73278930 -126351220 - L1MC4a LINE L1 -998 6810 6400 * 213 65 0 0 chr5 73278930 73278961 -126351189 + (TTGG)n Simple_repeat Simple_repeat 1 31 0 2416 96 0 0 chr5 73278969 73279282 -126350868 - AluSq SINE Alu 0 313 1 972 280 173 55 chr5 73279282 73279792 -126350358 - L1MC4a LINE L1 -1414 6394 5707 365 310 153 29 chr5 73279825 73280138 -126350012 + L2 LINE L2 2618 2969 -345 417 98 0 0 chr5 73280141 73280202 -126349948 - MSTB2 LTR MaLR -4 453 393 209 286 43 14 chr5 73280340 73280410 -126349740 - L2 LINE L2 -8 3305 3234 1115 216 48 39 chr5 73280420 73280878 -126349272 - L1M4 LINE L1 -2804 3342 2881 280 364 35 7 chr5 73280878 73281021 -126349129 - MIR SINE MIR -112 150 4 1912 138 36 42 chr5 73281814 73282147 -126348003 + MER2 DNA MER2_type 15 345 0 619 288 65 46 chr5 73282157 73282556 -126347594 - L1ME4a LINE L1 -263 5858 5504 350 217 33 33 chr5 73282670 73282790 -126347360 - L1ME4a LINE L1 -818 5328 5209 199 363 74 0 chr5 73282971 73283106 -126347044 - L2 LINE L2 -193 3079 2935 1707 269 48 47 chr5 73283162 73283817 -126346333 - L1MC4a LINE L1 -749 5397 5272 2235 133 133 13 chr5 73283817 73284199 -126345951 - MSTA LTR MaLR 0 428 1 1707 269 48 47 chr5 73284199 73284471 -126345679 - L1MC4a LINE L1 -874 5272 5002 2292 190 78 15 chr5 73285590 73286064 -126344086 + MLT1D LTR MaLR 2 505 0 461 326 0 28 chr5 73286651 73286795 -126343355 - L2 LINE L2 0 3272 3133 1043 140 17 11 chr5 73286836 73287014 -126343136 - L1MA9 LINE L1 0 6312 6134 2293 106 3 0 chr5 73287114 73287425 -126342725 - AluSx SINE Alu 0 312 1 434 299 60 24 chr5 73288277 73288444 -126341706 + MIR SINE MIR 3 175 -87 208 250 103 29 chr5 73288449 73288517 -126341633 - L2 LINE L2 0 3272 3200 21 0 0 0 chr5 73288635 73288656 -126341494 + AT_rich Low_complexity Low_complexity 1 21 0 2241 109 0 0 chr5 73288703 73289005 -126341145 + AluSc SINE Alu 1 302 -7 22 35 0 0 chr5 73289930 73289959 -126340191 + AT_rich Low_complexity Low_complexity 1 29 0 437 340 58 11 chr5 73290267 73290455 -126339695 + L2 LINE L2 2909 3105 -167 5322 190 104 33 chr5 73290541 73290609 -126339541 - Charlie1a DNA MER1_type -1311 1450 1388 1915 128 11 4 chr5 73290609 73290882 -126339268 + AluJb SINE Alu 22 296 -16 5322 190 104 33 chr5 73290882 73291855 -126338295 - Charlie1a DNA MER1_type -1373 1388 486 516 32 0 0 chr5 73291855 73291917 -126338233 + (CTTAT)n Simple_repeat Simple_repeat 2 63 0 2085 117 0 0 chr5 73291919 73292202 -126337948 - AluSx SINE Alu -29 283 1 5322 190 104 33 chr5 73292202 73292501 -126337649 - Charlie1a DNA MER1_type -2275 486 10 298 254 146 36 chr5 73292512 73292622 -126337528 + L2 LINE L2 3192 3313 0 969 90 8 0 chr5 73292784 73292917 -126337233 - L1PB2 LINE L1 0 6151 6018 2045 86 72 0 chr5 73293410 73293688 -126336462 - AluY SINE Alu -13 298 1 2309 112 0 0 chr5 73294450 73294762 -126335388 - AluSx SINE Alu 0 312 1 652 250 73 20 chr5 73296390 73296594 -126333556 + MIR SINE MIR 48 262 0 248 268 52 137 chr5 73297338 73297491 -126332659 + L2 LINE L2 3127 3266 -6 182 191 71 0 chr5 73297635 73297677 -126332473 - MIR SINE MIR -131 131 87 201 74 0 0 chr5 73298157 73298184 -126331966 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 296 276 141 24 chr5 73298710 73298880 -126331270 + L2 LINE L2 2772 2961 -353 243 273 15 0 chr5 73298910 73298976 -126331174 - MIR SINE MIR -4 258 192 351 300 0 36 chr5 73299258 73299368 -126330782 + L2 LINE L2 3208 3313 0 1752 65 0 0 chr5 73301002 73301216 -126328934 - L1PA13 LINE L1 -2 6161 5948 439 268 85 34 chr5 73301282 73301455 -126328695 + L1MC4a LINE L1 5711 5901 -1907 1723 113 117 4 chr5 73301455 73301720 -126328430 + AluSg1 SINE Alu 1 295 -14 439 268 85 34 chr5 73301720 73301781 -126328369 + L1MC4a LINE L1 5901 5957 -1851 2303 93 0 0 chr5 73302643 73302933 -126327217 + AluSg SINE Alu 21 310 0 550 224 33 26 chr5 73303687 73303839 -126326311 + MIR SINE MIR 110 262 0 1009 105 0 23 chr5 73303861 73303994 -126326156 + FLAM_C SINE Alu 1 130 -3 21 0 0 0 chr5 73303994 73304015 -126326135 + AT_rich Low_complexity Low_complexity 1 21 0 1994 111 9 38 chr5 73305323 73305638 -126324512 - AluSp SINE Alu -7 306 1 439 288 64 0 chr5 73307828 73307953 -126322197 + MIR SINE MIR 116 248 -14 308 204 65 43 chr5 73309225 73309318 -126320832 + MER20B DNA MER1_type 84 178 -605 21 36 0 0 chr5 73310061 73310089 -126320061 + AT_rich Low_complexity Low_complexity 1 28 0 4572 167 27 14 chr5 73311784 73312961 -126317189 - L1MB8 LINE L1 -16 6162 4971 2323 92 0 3 chr5 73312970 73313265 -126316885 - AluSx SINE Alu -18 294 1 464 265 181 34 chr5 73313333 73313654 -126316496 - L2 LINE L2 -2 3311 2944 271 308 86 50 chr5 73313789 73313987 -126316163 - MIR SINE MIR -37 225 21 644 236 146 66 chr5 73315073 73315374 -126314776 - MER102a DNA MER1_type -5 325 1 335 312 259 0 chr5 73315374 73315579 -126314571 + MIR SINE MIR 2 259 -3 31 0 0 0 chr5 73316295 73316326 -126313824 + AT_rich Low_complexity Low_complexity 1 31 0 800 173 0 68 chr5 73316358 73316520 -126313630 - FRAM SINE Alu -15 151 1 342 0 0 0 chr5 73317231 73317269 -126312881 + (A)n Simple_repeat Simple_repeat 1 38 0 1968 139 3 23 chr5 73317349 73317651 -126312499 + AluJo SINE Alu 1 296 -16 332 294 12 0 chr5 73318226 73318311 -126311839 + MIR3 SINE MIR 120 205 -3 461 328 94 0 chr5 73318695 73318887 -126311263 - L3 LINE CR1 -28 1549 1340 1180 247 11 28 chr5 73318904 73319387 -126310763 + L2 LINE L2 2537 3082 -231 693 247 67 31 chr5 73319423 73319617 -126310533 + MER63A DNA MER1_type 10 210 0 231 88 0 0 chr5 73320478 73320512 -126309638 + (GA)n Simple_repeat Simple_repeat 2 35 0 3891 191 47 28 chr5 73321539 73322104 -126308046 - L1MB7 LINE L1 0 6184 5632 2182 109 7 0 chr5 73322104 73322397 -126307753 - AluSp SINE Alu -18 295 1 3891 191 47 28 chr5 73322397 73323065 -126307085 - L1MB7 LINE L1 -552 5632 4927 1291 243 159 38 chr5 73324571 73325024 -126305126 + MLT1J LTR MaLR 2 509 -2 294 325 9 26 chr5 73325442 73325556 -126304594 - L2 LINE L2 -5 3267 3156 1099 268 82 53 chr5 73326031 73326482 -126303668 - LTR16B LTR ERVL 0 464 1 1652 69 20 0 chr5 73326768 73326972 -126303178 - L1PA7 LINE L1 0 6154 5947 195 250 0 0 chr5 73327076 73327124 -126303026 - L3b LINE CR1 -356 1227 1180 17139 81 8 2 chr5 73327698 73330674 -126299476 - L1PA7 LINE L1 0 6154 3167 259 341 22 0 chr5 73331233 73331324 -126298826 + L3 LINE CR1 419 511 -1066 2703 133 56 19 chr5 73331400 73331813 -126298337 + MSTA LTR MaLR 1 428 0 29 28 0 0 chr5 73332197 73332233 -126297917 + AT_rich Low_complexity Low_complexity 1 36 0 511 276 157 9 chr5 73332288 73332498 -126297652 - MIR SINE MIR -19 243 3 226 246 29 29 chr5 73333132 73333201 -126296949 + MLT1J LTR MaLR 111 179 -332 * 262 246 15 138 chr5 73333172 73333302 -126296848 + MLT1L LTR MaLR 216 329 -286 358 214 124 39 chr5 73333320 73333498 -126296652 + MLT1J LTR MaLR 292 484 -27 469 250 67 24 chr5 73334729 73334893 -126295257 + L3 LINE CR1 1170 1340 -237 1209 234 9 103 chr5 73335007 73335472 -126294678 - MER34 LTR ERV1 0 542 122 1363 96 0 0 chr5 73335472 73335659 -126294491 + L1PB1 LINE L1 5598 5784 -367 2052 121 48 0 chr5 73335660 73335950 -126294200 + AluSx SINE Alu 1 304 -8 299 64 0 21 chr5 73335956 73336003 -126294147 + (TA)n Simple_repeat Simple_repeat 2 47 0 2777 87 22 3 chr5 73336004 73336020 -126294130 + L1PB1 LINE L1 5777 5791 -360 183 42 0 0 chr5 73336020 73336044 -126294106 + (CA)n Simple_repeat Simple_repeat 2 25 0 2777 87 22 3 chr5 73336044 73336395 -126293755 + L1PB1 LINE L1 5791 6151 0 21 0 0 0 chr5 73336395 73336416 -126293734 + AT_rich Low_complexity Low_complexity 1 21 0 537 216 18 0 chr5 73336417 73336528 -126293622 - MER34 LTR ERV1 -426 116 4 1904 160 58 104 chr5 73337434 73337546 -126292604 - L1MB7 LINE L1 0 6184 6068 2324 89 3 3 chr5 73337546 73337839 -126292311 - AluSp SINE Alu -20 293 1 1904 160 58 104 chr5 73337839 73338245 -126291905 - L1MB7 LINE L1 -116 6068 5690 1620 169 7 11 chr5 73340036 73340314 -126289836 + AluJo SINE Alu 5 281 -31 30 27 0 0 chr5 73340321 73340358 -126289792 + AT_rich Low_complexity Low_complexity 1 37 0 1665 206 30 33 chr5 73340715 73341079 -126289071 + MLT1A1 LTR MaLR 3 365 0 1835 239 70 37 chr5 73342888 73343139 -126287011 - L2 LINE L2 -2 3311 3070 2282 101 3 13 chr5 73343139 73343455 -126286695 + AluSp SINE Alu 1 313 0 1835 239 70 37 chr5 73343455 73344006 -126286144 - L2 LINE L2 -243 3070 2483 1436 169 50 38 chr5 73344100 73344420 -126285730 + MER33 DNA MER1_type 1 324 0 293 253 16 16 chr5 73345019 73345114 -126285036 + MER5B DNA MER1_type 78 183 -6 261 98 0 0 chr5 73345239 73345280 -126284870 + (TG)n Simple_repeat Simple_repeat 2 42 0 203 241 138 23 chr5 73348024 73348111 -126282039 - MER5A DNA MER1_type -2 187 91 455 285 16 8 chr5 73348915 73349038 -126281112 + MIR SINE MIR 64 187 -75 372 344 28 6 chr5 73349249 73349429 -126280721 + MLT1L LTR MaLR 432 615 0 225 229 0 100 chr5 73349436 73349506 -126280644 + MIR SINE MIR 200 262 0 27 0 0 0 chr5 73350031 73350058 -126280092 + AT_rich Low_complexity Low_complexity 1 27 0 287 289 120 14 chr5 73350152 73350360 -126279790 - L1ME3A LINE L1 -209 5961 5732 1832 115 0 84 chr5 73350614 73350935 -126279215 + AluY SINE Alu 1 294 -17 234 308 99 0 chr5 73351060 73351151 -126278999 - L2 LINE L2 -254 3018 2919 2306 125 0 0 chr5 73351505 73351816 -126278334 - AluSx SINE Alu -1 311 1 689 175 0 7 chr5 73352228 73352371 -126277779 + GA-rich Low_complexity Low_complexity 3 144 0 767 280 17 17 chr5 73352673 73352905 -126277245 - MIR SINE MIR -3 259 28 332 362 17 0 chr5 73353383 73353499 -126276651 - L2 LINE L2 -219 3053 2936 5965 130 32 22 chr5 73353511 73354677 -126275473 + L1MA8 LINE L1 5113 6291 0 2527 242 61 49 chr5 73355103 73356083 -126274067 - L1M4 LINE L1 -1136 5010 4019 1546 253 63 23 chr5 73356088 73356686 -126273464 - L1M4 LINE L1 -2163 3983 3362 849 191 86 168 chr5 73356693 73357379 -126272771 + L1M4 LINE L1 2117 2746 -3400 296 258 21 0 chr5 73357372 73357469 -126272681 + L1M4 LINE L1 3294 3392 -2754 * 553 270 31 13 chr5 73357493 73357652 -126272498 - L2 LINE L2 -609 2705 2544 231 224 0 0 chr5 73357708 73357757 -126272393 - L2 LINE L2 -3 3310 3262 269 326 42 0 chr5 73358334 73358429 -126271721 - MIR SINE MIR -65 143 45 1886 130 12 43 chr5 73359284 73359579 -126270571 + L1MC1 LINE L1 6020 6306 -27 2419 131 3 3 chr5 73359579 73359922 -126270228 + L1PA15 LINE L1 5820 6162 -3 1886 130 12 43 chr5 73359922 73359950 -126270200 + L1MC1 LINE L1 6306 6333 0 200 231 301 13 chr5 73360005 73360161 -126269989 + MIR3 SINE MIR 3 203 -5 556 125 0 0 chr5 73361625 73361705 -126268445 + MADE1 DNA Mariner 1 80 0 330 26 0 0 chr5 73362030 73362069 -126268081 + (TG)n Simple_repeat Simple_repeat 1 39 0 229 265 84 36 chr5 73363302 73363385 -126266765 + MIR SINE MIR 126 212 -50 234 0 0 0 chr5 73363781 73363807 -126266343 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 2337 49 0 11 chr5 73363807 73364089 -126266061 - AluY SINE Alu -32 279 1 203 184 0 0 chr5 73365387 73365425 -126264725 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 327 248 284 9 chr5 73365463 73365572 -126264578 - L2 LINE L2 0 3272 3134 1575 208 65 51 chr5 73365650 73365758 -126264392 - MER63B DNA MER1_type -628 434 329 2001 112 0 66 chr5 73365758 73366063 -126264087 + AluSx SINE Alu 3 287 -25 1575 208 65 51 chr5 73366063 73366382 -126263768 - MER63B DNA MER1_type -733 329 1 797 252 72 68 chr5 73366453 73366910 -126263240 + MLT1J LTR MaLR 1 459 -52 273 325 12 0 chr5 73367696 73367776 -126262374 + C-rich Low_complexity Low_complexity 5 85 0 180 0 0 0 chr5 73369070 73369090 -126261060 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 180 371 0 0 chr5 73369097 73369167 -126260983 - MER5A DNA MER1_type -48 141 72 2199 105 30 0 chr5 73369908 73370204 -126259946 + AluSp SINE Alu 1 305 -8 21 36 0 0 chr5 73371365 73371393 -126258757 + AT_rich Low_complexity Low_complexity 1 28 0 562 289 139 5 chr5 73371558 73371752 -126258398 - MIR SINE MIR -21 241 22 259 241 28 37 chr5 73373346 73373454 -126256696 + (CATA)n Simple_repeat Simple_repeat 2 108 0 435 269 94 56 chr5 73374739 73374899 -126255251 + MIR SINE MIR 9 174 -88 2473 153 104 2 chr5 73375029 73375453 -126254697 - LTR24 LTR ERV1 0 467 1 194 211 77 0 chr5 73375499 73375551 -126254599 - L2 LINE L2 0 3313 3258 258 236 18 0 chr5 73377133 73377188 -126252962 - L1MC/D LINE L1 -2138 5670 5615 411 241 19 0 chr5 73378402 73378510 -126251640 - L1MC/D LINE L1 -1542 4604 4495 506 227 78 8 chr5 73379847 73379975 -126250175 - L2 LINE L2 0 3272 3136 616 346 41 30 chr5 73381011 73381470 -126248680 - LTR16B LTR ERVL 0 464 1 603 374 16 8 chr5 73381746 73382112 -126248038 - HERVL LTR ERVL -543 5111 4743 1563 285 33 68 chr5 73382112 73382688 -126247462 - HERVL LTR ERVL -2306 2690 2135 1530 304 42 15 chr5 73382751 73383704 -126246446 - HERVL LTR ERVL -3009 1987 872 496 344 66 25 chr5 73384157 73384477 -126245673 - HERVL LTR ERVL -4622 374 42 392 313 111 0 chr5 73384499 73384707 -126245443 - LTR16B LTR ERVL -8 456 226 228 325 25 0 chr5 73385759 73385839 -126244311 + MIR SINE MIR 79 160 -102 329 266 154 35 chr5 73385875 73386044 -126244106 + MIR SINE MIR 1 189 -73 768 278 20 4 chr5 73386115 73386480 -126243670 + LTR16C LTR ERVL 76 482 -9 183 42 0 0 chr5 73386490 73386514 -126243636 + (CA)n Simple_repeat Simple_repeat 1 24 0 428 245 31 0 chr5 73387488 73387586 -126242564 + L2 LINE L2 3191 3291 -22 7974 236 68 21 chr5 73387599 73390140 -126240010 - L1ME2 LINE L1 -1 6232 3492 243 61 0 0 chr5 73390140 73390173 -126239977 + (TG)n Simple_repeat Simple_repeat 2 34 0 7974 236 68 21 chr5 73390173 73391000 -126239150 - L1ME2 LINE L1 -2741 3492 2705 619 257 15 0 chr5 73391033 73391169 -126238981 - MER58B DNA MER1_type -1 340 203 826 297 38 41 chr5 73391220 73391859 -126238291 - L1ME2 LINE L1 -3539 2676 1971 1285 287 25 57 chr5 73391859 73392336 -126237814 - LTR16B LTR ERVL -2 462 1 1317 340 33 30 chr5 73392342 73393603 -126236547 - ERVL LTR ERVL -5 5177 4203 388 250 0 90 chr5 73393625 73393769 -126236381 - ERVL LTR ERVL -1119 4645 4515 * 4369 346 39 19 chr5 73393768 73394772 -126235378 - ERVL LTR ERVL -1578 4186 3204 1716 212 11 45 chr5 73394772 73395150 -126235000 + MLT1A1 LTR MaLR 1 365 0 4369 346 39 19 chr5 73395150 73396393 -126233757 - ERVL LTR ERVL -2560 3204 1894 1952 92 0 4 chr5 73396492 73396743 -126233407 - AluSc SINE Alu -4 305 56 324 125 0 0 chr5 73396745 73396793 -126233357 + Alu SINE Alu 1 48 -254 493 295 22 65 chr5 73397165 73397407 -126232743 + L1M4 LINE L1 3312 3538 -2608 2317 84 0 19 chr5 73397407 73397717 -126232433 + AluY SINE Alu 1 304 -7 493 295 22 65 chr5 73397717 73397796 -126232354 + L1M4 LINE L1 3538 3619 -2527 2124 262 47 58 chr5 73398667 73399855 -126230295 + L1ME3A LINE L1 870 2034 -4612 724 274 63 27 chr5 73399838 73400250 -126229900 + L1ME3A LINE L1 2347 2773 -4052 * 280 290 47 19 chr5 73400248 73400355 -126229795 + L1ME1 LINE L1 6025 6134 -32 * 1053 279 68 30 chr5 73400428 73400929 -126229221 + L1ME3A LINE L1 4097 4616 -2028 1596 120 31 4 chr5 73400943 73401202 -126228948 + L1MA7 LINE L1 6026 6291 0 906 265 81 3 chr5 73401222 73401718 -126228432 + L1ME3A LINE L1 5605 6134 -528 1144 225 0 0 chr5 73401737 73401937 -126228213 + MER8 DNA MER2_type 2 201 -38 398 22 0 0 chr5 73401974 73402019 -126228131 - Tigger2 DNA MER2_type -2673 45 1 411 321 32 12 chr5 73402046 73402275 -126227875 + L1ME3A LINE L1 6152 6381 -287 2166 199 48 90 chr5 73402563 73403250 -126226900 + L1ME1 LINE L1 5504 6161 -5 309 236 76 118 chr5 73403261 73403405 -126226745 - L2 LINE L2 -149 3164 3027 321 309 0 10 chr5 73403411 73403508 -126226642 - L1ME LINE L1 -529 5592 5497 887 276 111 16 chr5 73405243 73405631 -126224519 - L2 LINE L2 -6 3307 2883 198 0 0 0 chr5 73405645 73405667 -126224483 + (A)n Simple_repeat Simple_repeat 1 22 0 22 0 0 0 chr5 73406658 73406680 -126223470 + AT_rich Low_complexity Low_complexity 1 22 0 213 178 44 0 chr5 73408193 73408238 -126221912 - L2 LINE L2 0 3313 3267 290 205 115 0 chr5 73408881 73408959 -126221191 + MIR SINE MIR 109 195 -67 2405 131 19 3 chr5 73409888 73410247 -126219903 + MLT1A1 LTR MaLR 1 365 0 1248 168 4 0 chr5 73410875 73411101 -126219049 - L1MA4 LINE L1 -5 6295 6069 2391 104 0 0 chr5 73411165 73411473 -126218677 + AluSg SINE Alu 1 308 -2 2409 112 0 0 chr5 73411667 73411979 -126218171 - AluSq SINE Alu -1 312 1 231 253 212 0 chr5 73412937 73413036 -126217114 - MIR SINE MIR -22 240 121 1961 139 7 10 chr5 73413732 73414027 -126216123 - AluJb SINE Alu -16 296 3 1435 238 38 61 chr5 73414079 73414121 -126216029 - L1ME3 LINE L1 -29 6133 6092 189 107 0 0 chr5 73414121 73414149 -126216001 + (CA)n Simple_repeat Simple_repeat 2 29 0 1435 238 38 61 chr5 73414149 73414660 -126215490 - L1ME3 LINE L1 -70 6092 5593 1204 310 63 57 chr5 73414780 73415637 -126214513 + ERVL LTR ERVL 3285 4453 -889 442 366 6 0 chr5 73415802 73415974 -126214176 + ERVL LTR ERVL 4722 4894 -870 327 239 62 71 chr5 73415975 73416088 -126214062 - L1ME3 LINE L1 -225 5939 5828 280 286 61 66 chr5 73416246 73416459 -126213691 + MERVL LTR ERVL 5073 5284 -201 1572 258 40 42 chr5 73416607 73417037 -126213113 + LTR16A LTR ERVL 19 447 -3 259 261 7 150 chr5 73417039 73417192 -126212958 - L1ME3 LINE L1 -593 5573 5443 892 168 139 0 chr5 73417195 73417461 -126212689 - L1ME3 LINE L1 -684 5478 5185 1822 183 192 18 chr5 73417479 73417927 -126212223 - L1MD2 LINE L1 0 6359 5834 714 277 147 30 chr5 73418962 73419363 -126210787 + L2 LINE L2 2498 2945 -369 23 0 0 0 chr5 73419539 73419562 -126210588 + AT_rich Low_complexity Low_complexity 1 23 0 324 301 21 0 chr5 73421010 73421103 -126209047 + L2 LINE L2 3214 3308 -5 822 213 62 20 chr5 73422003 73422247 -126207903 - MIR SINE MIR -1 261 8 559 270 152 17 chr5 73422376 73422606 -126207544 - MIR SINE MIR 0 262 2 438 20 0 0 chr5 73423325 73423376 -126206774 + (CAG)n Simple_repeat Simple_repeat 1 51 0 447 19 0 0 chr5 73423533 73423585 -126206565 + (CA)n Simple_repeat Simple_repeat 1 52 0 1847 145 21 74 chr5 73423595 73423829 -126206321 - MER2 DNA MER2_type -25 320 108 1904 71 0 45 chr5 73423829 73424098 -126206052 - L1PA5 LINE L1 0 6154 5898 1847 145 21 74 chr5 73424098 73424201 -126205949 - MER2 DNA MER2_type -237 108 1 180 0 0 0 chr5 73424713 73424733 -126205417 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 297 0 0 0 chr5 73424732 73424765 -126205385 + (TG)n Simple_repeat Simple_repeat 1 33 0 278 216 64 0 chr5 73425467 73425592 -126204558 + (TA)n Simple_repeat Simple_repeat 2 134 0 21 36 0 0 chr5 73426318 73426346 -126203804 + AT_rich Low_complexity Low_complexity 1 28 0 281 208 14 0 chr5 73426760 73426832 -126203318 + CT-rich Low_complexity Low_complexity 3 75 0 269 286 76 0 chr5 73427982 73428101 -126202049 - MIR SINE MIR -12 250 123 183 312 117 78 chr5 73428320 73428551 -126201599 + L2 LINE L2 3031 3270 -2 398 286 35 50 chr5 73428594 73428793 -126201357 + MIR3 SINE MIR 7 202 -6 12646 81 7 7 chr5 73429137 73431598 -126198552 + L1PA7 LINE L1 3681 6154 0 408 300 148 30 chr5 73432184 73432514 -126197636 + L3 LINE CR1 1192 1560 -17 313 217 29 0 chr5 73432748 73432817 -126197333 + MLT1J LTR MaLR 110 180 -331 933 223 188 34 chr5 73432849 73432939 -126197211 - LTR33 LTR ERVL -2 519 444 4858 104 16 17 chr5 73432939 73433631 -126196519 + LTR8 LTR ERV1 1 691 0 933 223 188 34 chr5 73433631 73433932 -126196218 - LTR33 LTR ERVL -77 444 48 2079 201 63 70 chr5 73433932 73434490 -126195660 - MLT2B3 LTR ERVL 0 554 1 933 223 188 34 chr5 73434490 73434545 -126195605 - LTR33 LTR ERVL -473 48 3 283 188 0 0 chr5 73434565 73434613 -126195537 + MLT1L LTR MaLR 348 395 -220 1401 187 105 32 chr5 73434758 73434771 -126195379 - MER88 LTR ERVL -1 463 452 4337 136 16 38 chr5 73434771 73435507 -126194643 + MER72 LTR ERV1 1 720 -2 1401 187 105 32 chr5 73435507 73435835 -126194315 - MER88 LTR ERVL -12 452 97 443 275 47 23 chr5 73436509 73436680 -126193470 + MIR SINE MIR 67 241 -21 * 701 233 148 5 chr5 73436656 73436866 -126193284 - MIR SINE MIR -21 241 2 315 194 0 16 chr5 73438765 73438827 -126191323 + MIR3 SINE MIR 111 171 -37 1999 225 60 29 chr5 73439602 73439835 -126190315 - L1M4 LINE L1 -1314 4832 4608 1994 148 0 0 chr5 73439835 73440125 -126190025 - AluSx SINE Alu -22 290 1 1999 225 60 29 chr5 73440125 73440486 -126189664 - L1M4 LINE L1 -1538 4608 4219 2768 186 194 128 chr5 73443804 73444395 -126185755 + L1MD3 LINE L1 6633 7184 -811 416 274 28 0 chr5 73444395 73444501 -126185649 + MLT1F1 LTR MaLR 3 111 -456 2768 186 194 128 chr5 73444501 73444929 -126185221 + L1MD3 LINE L1 7184 7831 -164 610 194 18 18 chr5 73444930 73445095 -126185055 + L1MD2 LINE L1 6195 6359 0 397 258 76 103 chr5 73445106 73445435 -126184715 + L1MDa LINE L1 16 335 -6205 284 227 101 64 chr5 73445740 73445939 -126184211 + L1MDa LINE L1 764 971 -5559 2335 222 139 57 chr5 73446086 73446947 -126183203 + L1MDa LINE L1 1013 2011 -4529 1965 151 7 0 chr5 73446947 73447239 -126182911 + AluSx SINE Alu 1 294 -18 2335 222 139 57 chr5 73447239 73447630 -126182520 + L1MDa LINE L1 2011 2368 -4172 610 247 31 62 chr5 73448082 73448134 -126182016 - MIR SINE MIR -29 233 181 252 59 0 0 chr5 73448134 73448168 -126181982 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 610 247 31 62 chr5 73448168 73448342 -126181808 - MIR SINE MIR -81 181 14 2990 101 27 9 chr5 73450253 73450691 -126179459 + MER4C LTR ERV1 20 465 0 2315 118 0 0 chr5 73450729 73451034 -126179116 + AluSg1 SINE Alu 1 305 -4 2507 184 119 11 chr5 73451397 73451925 -126178225 + MER34C LTR ERV1 1 585 0 3272 120 0 0 chr5 73452343 73452802 -126177348 - MER41B LTR ERV1 0 635 177 5961 112 24 24 chr5 73452890 73453954 -126176196 - L1PB1 LINE L1 -2 6149 5086 1231 102 38 0 chr5 73453954 73454140 -126176010 - MER41B LTR ERV1 -442 193 1 1147 236 99 22 chr5 73454140 73454618 -126175532 - MLT1G1 LTR MaLR -48 547 1 505 304 66 21 chr5 73454628 73454871 -126175279 - MIR SINE MIR -4 258 5 321 219 39 129 chr5 73455050 73455205 -126174945 - MIR SINE MIR -108 154 14 298 228 76 0 chr5 73455224 73455303 -126174847 + MIR3 SINE MIR 90 174 -34 996 178 14 39 chr5 73455378 73455586 -126174564 - MER20 DNA MER1_type 0 219 17 182 91 30 0 chr5 73455881 73455914 -126174236 + CT-rich Low_complexity Low_complexity 2 35 0 384 22 0 0 chr5 73455962 73456007 -126174143 + (TG)n Simple_repeat Simple_repeat 2 46 0 297 135 0 0 chr5 73456012 73456064 -126174086 + (TC)n Simple_repeat Simple_repeat 1 52 0 379 336 50 7 chr5 73457179 73457319 -126172831 + MER5A DNA MER1_type 43 188 -1 1208 232 3 0 chr5 73458711 73459004 -126171146 - L1M4 LINE L1 -2325 3821 3528 678 199 7 14 chr5 73459005 73459151 -126170999 - MLT1F LTR MaLR -9 533 389 425 259 74 33 chr5 73459163 73459406 -126170744 - L1MEc LINE L1 -4739 2202 1950 381 22 0 0 chr5 73459412 73459458 -126170692 + (TG)n Simple_repeat Simple_repeat 2 47 0 335 278 21 35 chr5 73459486 73459644 -126170506 - L1MEc LINE L1 -5166 1956 1601 297 244 55 43 chr5 73459672 73459836 -126170314 - L1MEc LINE L1 -5004 1419 1254 366 178 0 0 chr5 73459968 73460041 -126170109 - L1M4 LINE L1 -1582 4564 4492 213 230 13 59 chr5 73460461 73460599 -126169551 + A-rich Low_complexity Low_complexity 3 224 0 204 98 0 89 chr5 73460613 73460725 -126169425 + (CAAAAA)n Simple_repeat Simple_repeat 5 106 0 287 195 19 45 chr5 73460737 73460981 -126169169 + (CA)n Simple_repeat Simple_repeat 1 237 0 2130 214 68 54 chr5 73462249 73463353 -126166797 - L1ME LINE L1 -539 5692 4580 420 265 66 27 chr5 73463632 73463889 -126166261 - L1ME LINE L1 -2281 3934 3668 382 273 69 23 chr5 73464066 73464630 -126165520 - L1ME LINE L1 -4053 2343 1576 1603 217 79 26 chr5 73464738 73465194 -126164956 + MLT1E2 LTR MaLR 147 626 0 305 140 18 0 chr5 73465378 73465435 -126164715 + GA-rich Low_complexity Low_complexity 3 60 0 336 93 0 74 chr5 73465513 73465621 -126164529 + (CAAAAA)n Simple_repeat Simple_repeat 3 102 0 387 283 13 44 chr5 73465621 73465780 -126164370 + GA-rich Low_complexity Low_complexity 5 158 0 509 278 0 40 chr5 73466088 73466214 -126163936 - L2 LINE L2 0 3272 3152 642 262 59 11 chr5 73466214 73466401 -126163749 - MIR SINE MIR -66 196 1 247 336 45 0 chr5 73466705 73466815 -126163335 + L2 LINE L2 1859 1973 -1341 493 272 107 19 chr5 73467416 73467622 -126162528 - L1M4 LINE L1 -1810 4336 4113 1772 219 42 34 chr5 73467684 73468417 -126161733 - L1ME1 LINE L1 -7 6159 5318 283 238 40 48 chr5 73468482 73468608 -126161542 - AluSp/q SINE Alu -25 278 154 246 271 0 17 chr5 73468982 73469041 -126161109 - L2 LINE L2 -18 3254 3197 * 463 258 55 31 chr5 73469023 73469151 -126160999 - MIR SINE MIR -127 135 5 1473 238 98 23 chr5 73470433 73470612 -126159538 - L1ME LINE L1 -5419 977 813 1014 241 111 11 chr5 73470612 73470874 -126159276 - AluJo SINE Alu -13 289 2 1473 238 98 23 chr5 73470874 73471212 -126158938 - L1ME LINE L1 -5583 813 421 1635 182 10 27 chr5 73471213 73471509 -126158641 + AluSx SINE Alu 1 291 -21 917 261 62 7 chr5 73471793 73472065 -126158085 - MLT1J1 LTR MaLR -141 305 19 570 285 198 5 chr5 73472243 73472450 -126157700 - MIR SINE MIR -12 250 4 1456 231 86 25 chr5 73474325 73474952 -126155198 + L1M4 LINE L1 4112 4776 -1370 452 250 0 0 chr5 73475165 73475261 -126154889 + MER21B LTR ERV1 1 96 -767 2534 224 101 27 chr5 73475268 73476003 -126154147 + MER21B LTR ERV1 19 807 -56 6077 72 5 8 chr5 73476324 73477154 -126152996 + L1PA2 LINE L1 5328 6154 -1 2158 93 0 130 chr5 73477154 73477584 -126152566 - THE1C-int LTR MaLR -1206 374 1 2279 117 5 56 chr5 73477584 73477979 -126152171 - THE1C LTR MaLR 0 375 1 549 160 52 77 chr5 73477988 73478182 -126151968 - L1MEc LINE L1 -4064 2332 2144 1754 273 87 48 chr5 73478498 73480536 -126149614 - L1ME3A LINE L1 -27 6143 4023 299 284 9 26 chr5 73481153 73481269 -126148881 + GA-rich Low_complexity Low_complexity 3 116 0 227 226 0 7 chr5 73481905 73481974 -126148176 - MIR SINE MIR -24 184 116 1843 159 80 3 chr5 73481974 73482313 -126147837 + MLT1A1 LTR MaLR 1 365 0 832 138 13 33 chr5 73482369 73482521 -126147629 - AluSg/x SINE Alu -7 303 155 438 289 122 56 chr5 73482756 73483060 -126147090 + HAL1 LINE L1 760 1083 -1424 1771 163 0 37 chr5 73483098 73483421 -126146729 - AluSx SINE Alu 0 312 1 2188 81 3 7 chr5 73483437 73483749 -126146401 - AluY SINE Alu 0 312 2 204 118 20 39 chr5 73483812 73483863 -126146287 + (TA)n Simple_repeat Simple_repeat 2 51 0 4073 145 17 9 chr5 73484089 73484974 -126145176 + L1MA5A LINE L1 5126 6016 -281 207 69 0 0 chr5 73485287 73485316 -126144834 + (TG)n Simple_repeat Simple_repeat 1 29 0 950 202 19 14 chr5 73485462 73485675 -126144475 + MIR SINE MIR 18 231 -31 210 236 0 0 chr5 73486326 73486381 -126143769 + (TG)n Simple_repeat Simple_repeat 2 56 0 361 36 36 0 chr5 73487074 73487129 -126143021 + (GA)n Simple_repeat Simple_repeat 2 58 0 443 200 21 14 chr5 73487510 73487655 -126142495 + CT-rich Low_complexity Low_complexity 1 146 0 2206 76 22 37 chr5 73488033 73488388 -126141762 - THE1B LTR MaLR -14 350 1 314 186 0 17 chr5 73489814 73489873 -126140277 + MLT1L LTR MaLR 7 64 -551 781 305 23 19 chr5 73489911 73490167 -126139983 + MIR SINE MIR 3 259 -3 2171 121 44 0 chr5 73490168 73490466 -126139684 - AluSx SINE Alu -1 311 1 253 264 14 0 chr5 73490509 73490581 -126139569 + MLT1L LTR MaLR 192 264 -351 334 306 19 19 chr5 73543089 73543197 -126086953 + MIR SINE MIR 38 145 -117 2473 90 3 0 chr5 73543577 73543888 -126086262 + AluSq SINE Alu 1 312 -1 2308 120 0 0 chr5 73544843 73545152 -126084998 + AluSg SINE Alu 1 309 -1 533 239 8 0 chr5 73545609 73545726 -126084424 + MIR3 SINE MIR 43 160 -48 198 167 0 0 chr5 73545773 73545809 -126084341 + CT-rich Low_complexity Low_complexity 4 39 0 1905 152 29 19 chr5 73545813 73546122 -126084028 - AluJo SINE Alu 0 312 1 218 250 194 0 chr5 73547181 73547253 -126082897 + L2 LINE L2 3187 3272 0 330 213 27 0 chr5 73547468 73547543 -126082607 + MIR3 SINE MIR 88 164 -44 351 188 227 0 chr5 73547863 73547991 -126082159 - MIR SINE MIR -78 184 28 1916 107 52 7 chr5 73552567 73552866 -126077284 + AluSq SINE Alu 1 311 0 1981 134 0 7 chr5 73553204 73553488 -126076662 + AluJb SINE Alu 9 290 -22 474 300 50 5 chr5 73554855 73555075 -126075075 + MIR SINE MIR 3 232 -30 1825 151 3 14 chr5 73555738 73556051 -126074099 + AluJb SINE Alu 2 311 0 254 318 0 64 chr5 73556314 73556424 -126073726 + MIR3 SINE MIR 95 197 -11 417 123 0 0 chr5 73556783 73556848 -126073302 + (TTCC)n Simple_repeat Simple_repeat 1 65 0 373 591 0 11 chr5 73556805 73556986 -126073164 + polypyrimidine Low_complexity Low_complexity 2 180 0 * 1520 133 9 0 chr5 73557001 73557212 -126072938 - AluJb SINE Alu -17 295 83 21 0 0 0 chr5 73557281 73557302 -126072848 + AT_rich Low_complexity Low_complexity 1 21 0 413 143 0 13 chr5 73559915 73559992 -126070158 + (TTCC)n Simple_repeat Simple_repeat 2 77 0 2334 102 0 0 chr5 73560010 73560305 -126069845 - AluSx SINE Alu -17 295 1 414 0 0 0 chr5 73560728 73560774 -126069376 + (TG)n Simple_repeat Simple_repeat 2 47 0 770 261 18 14 chr5 73562924 73563142 -126067008 + MIR SINE MIR 10 228 -34 453 151 0 0 chr5 73563360 73563446 -126066704 - L1MB8 LINE L1 0 6178 6093 2771 179 48 25 chr5 73563468 73563554 -126066596 - L1MB4 LINE L1 -25 6155 6072 1794 157 0 42 chr5 73563554 73563725 -126066425 - AluJo SINE Alu -13 299 145 2254 103 0 13 chr5 73563725 73564025 -126066125 - AluSg SINE Alu -14 296 1 1794 157 0 42 chr5 73564025 73564165 -126065985 - AluJo SINE Alu -167 145 1 2771 179 48 25 chr5 73564165 73564680 -126065470 - L1MB4 LINE L1 -108 6072 5540 719 234 60 28 chr5 73566285 73566533 -126063617 + MIR SINE MIR 7 262 0 2071 178 61 5 chr5 73566817 73567245 -126062905 - L1MB7 LINE L1 -19 6165 5714 1473 118 4 35 chr5 73567398 73567626 -126062524 + AluJb SINE Alu 86 306 -6 211 271 0 71 chr5 73567803 73567873 -126062277 + L2 LINE L2 3227 3291 -22 183 214 200 14 chr5 73571296 73571366 -126058784 - L3 LINE CR1 -127 1450 1368 758 201 19 19 chr5 73571552 73571711 -126058439 + FRAM SINE Alu 1 159 -7 21 0 0 0 chr5 73571724 73571745 -126058405 + AT_rich Low_complexity Low_complexity 1 21 0 429 221 205 47 chr5 73571767 73572025 -126058125 - L2 LINE L2 -941 2373 2075 201 329 51 22 chr5 73572043 73572180 -126057970 - L3 LINE CR1 -458 1119 979 617 228 101 7 chr5 73572236 73572385 -126057765 - MER69A DNA AcHobo -7 170 8 929 277 182 22 chr5 73572393 73572892 -126057258 - L3 LINE CR1 -651 926 348 207 0 0 0 chr5 73575836 73575859 -126054291 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 443 288 0 33 chr5 73577368 73577552 -126052598 + GA-rich Low_complexity Low_complexity 3 180 0 39 38 0 0 chr5 73582827 73582880 -126047270 + AT_rich Low_complexity Low_complexity 1 53 0 1634 162 0 47 chr5 73583098 73583394 -126046756 + AluJo SINE Alu 16 297 -15 543 244 45 19 chr5 73584587 73584743 -126045407 + MER5B DNA MER1_type 19 178 0 438 147 0 0 chr5 73586331 73586399 -126043751 - FLAM SINE Alu -19 124 57 260 198 0 12 chr5 73587555 73587641 -126042509 + GA-rich Low_complexity Low_complexity 2 86 0 21 57 0 0 chr5 73589478 73589513 -126040637 + AT_rich Low_complexity Low_complexity 1 35 0 189 0 0 0 chr5 73589963 73589984 -126040166 + (T)n Simple_repeat Simple_repeat 1 21 0 989 187 6 6 chr5 73591861 73592027 -126038123 + FRAM SINE Alu 1 166 0 405 0 0 0 chr5 73592451 73592496 -126037654 + (TG)n Simple_repeat Simple_repeat 1 45 0 573 196 18 9 chr5 73593053 73593165 -126036985 - MER81 DNA DNA -1 113 1 2169 269 66 37 chr5 73593681 73594605 -126035545 + L2 LINE L2 2180 3128 -185 1524 112 0 0 chr5 73594638 73594835 -126035315 + AluSx SINE Alu 1 197 -115 365 78 0 0 chr5 73594835 73594886 -126035264 + AluSx SINE Alu 252 302 0 948 171 16 122 chr5 73596025 73596270 -126033880 - MER20 DNA MER1_type 0 219 1 713 287 63 14 chr5 73596466 73596752 -126033398 + LTR16C LTR ERVL 192 491 0 257 308 130 10 chr5 73596776 73596984 -126033166 + MIR SINE MIR 30 262 0 385 256 26 8 chr5 73597295 73597412 -126032738 - L2 LINE L2 -4 3309 3191 634 276 71 86 chr5 73597478 73597884 -126032266 + HERV16 LTR ERVL 1026 1425 -3571 391 256 52 52 chr5 73597886 73598058 -126032092 + LTR16B LTR ERVL 293 464 0 1930 120 4 4 chr5 73598303 73598570 -126031580 - AluSx SINE Alu -38 274 8 214 296 71 51 chr5 73599082 73599180 -126030970 + L2 LINE L2 3186 3285 -28 1395 186 163 12 chr5 73599901 73600305 -126029845 - MLT1C LTR MaLR -2 465 1 2250 119 0 3 chr5 73602239 73602549 -126027601 + AluSx SINE Alu 1 309 -3 198 223 78 58 chr5 73604674 73604777 -126025373 + MIR SINE MIR 23 128 -80 1771 177 14 0 chr5 73606083 73606377 -126023773 + AluJo SINE Alu 3 300 -12 239 316 47 70 chr5 73608511 73608682 -126021468 - L3b LINE CR1 -68 1515 1349 554 233 115 8 chr5 73610414 73610667 -126019483 + L1ME4a LINE L1 5838 6117 -4 1890 169 0 31 chr5 73611856 73612176 -126017974 - AluJo SINE Alu -2 310 1 375 297 188 33 chr5 73612259 73612535 -126017615 + L2 LINE L2 1675 1993 -1321 671 334 126 33 chr5 73612616 73613359 -126016791 + L2 LINE L2 2227 3054 -218 200 263 35 0 chr5 73613660 73613717 -126016433 + L3 LINE CR1 1513 1571 -6 558 207 241 39 chr5 73613729 73613932 -126016218 + MIR SINE MIR 16 259 -3 24 32 0 0 chr5 73615918 73615949 -126014201 + AT_rich Low_complexity Low_complexity 1 31 0 208 147 0 0 chr5 73616453 73616487 -126013663 + (A)n Simple_repeat Simple_repeat 1 34 0 366 318 56 34 chr5 73616696 73616875 -126013275 + MER5A DNA MER1_type 7 189 0 227 300 0 78 chr5 73617233 73617282 -126012868 - MIR3 SINE MIR -6 202 161 276 160 20 0 chr5 73617282 73617332 -126012818 - MER5B DNA MER1_type 0 178 128 195 42 0 0 chr5 73617332 73617356 -126012794 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1575 136 0 0 chr5 73617387 73617630 -126012520 + L1MC1 LINE L1 6051 6293 -40 249 241 89 18 chr5 73617634 73617746 -126012404 + MER34B LTR ERV1 5 124 -441 599 212 146 51 chr5 73617797 73618113 -126012037 + MER34B LTR ERV1 220 565 0 492 320 27 13 chr5 73618140 73618290 -126011860 + MER5B DNA MER1_type 27 178 0 964 167 0 3 chr5 73618888 73619128 -126011022 - AluJb SINE Alu 0 312 1 203 375 67 39 chr5 73619188 73619292 -126010858 + L2 LINE L2 3136 3242 -30 23 0 0 0 chr5 73619813 73619836 -126010314 + AT_rich Low_complexity Low_complexity 1 23 0 1284 155 46 18 chr5 73621646 73621865 -126008285 - AluJo SINE Alu 0 312 88 266 319 32 11 chr5 73622016 73622110 -126008040 + L2 LINE L2 3142 3237 -35 695 170 0 0 chr5 73623036 73623142 -126007008 - AluJo SINE Alu -30 282 177 879 153 0 0 chr5 73623142 73623273 -126006877 - AluJo SINE Alu -171 131 1 697 179 0 8 chr5 73624530 73624646 -126005504 + FLAM_C SINE Alu 1 117 -185 403 71 0 29 chr5 73624646 73624716 -126005434 + (CA)n Simple_repeat Simple_repeat 2 69 0 195 245 49 133 chr5 73625627 73625770 -126004380 - L3 LINE CR1 -67 1510 1380 416 221 27 10 chr5 73625771 73625890 -126004260 - L1ME1 LINE L1 -5 6161 6053 557 130 0 40 chr5 73626405 73626505 -126003645 - FLAM_C SINE Alu -8 135 40 198 0 0 0 chr5 73626596 73626618 -126003532 + (TC)n Simple_repeat Simple_repeat 2 23 0 218 242 0 32 chr5 73627287 73627349 -126002801 + A-rich Low_complexity Low_complexity 1 60 0 383 294 11 0 chr5 73628719 73628811 -126001339 + MIR SINE MIR 58 150 -58 265 149 21 0 chr5 73628821 73628868 -126001282 - Charlie8 DNA MER1_type -3 2414 2367 225 0 0 0 chr5 73630401 73630426 -125999724 + (A)n Simple_repeat Simple_repeat 1 25 0 200 297 121 22 chr5 73631018 73631109 -125999041 - L2 LINE L2 -19 3294 3195 2258 88 0 3 chr5 73631134 73631430 -125998720 + AluSx SINE Alu 1 295 -17 2432 71 0 10 chr5 73631432 73631742 -125998408 + AluY SINE Alu 1 307 -4 293 243 169 52 chr5 73632289 73632425 -125997725 + MIR SINE MIR 44 195 -67 435 119 0 0 chr5 73632510 73632569 -125997581 - AluJ/FRAM SINE Alu -24 288 230 228 155 121 0 chr5 73632718 73632776 -125997374 + MIR SINE MIR 170 234 -28 313 299 0 11 chr5 73634179 73634314 -125995836 - MIR SINE MIR -1 261 81 554 304 142 9 chr5 73634533 73635079 -125995071 - HAL1 LINE L1 -1757 750 8 724 217 0 0 chr5 73635681 73635810 -125994340 - FLAM_A SINE Alu -4 129 1 2116 130 0 37 chr5 73636759 73637083 -125993067 - AluSx SINE Alu 0 312 1 939 255 45 8 chr5 73637318 73637561 -125992589 - MIR SINE MIR -9 253 2 347 252 47 37 chr5 73638913 73639020 -125991130 + MIR3 SINE MIR 62 169 -39 2311 99 0 3 chr5 73639535 73639839 -125990311 + AluSg SINE Alu 1 303 -7 1231 196 15 101 chr5 73640177 73640574 -125989576 + MLT1A1 LTR MaLR 3 365 0 343 317 30 18 chr5 73640602 73640769 -125989381 + L2 LINE L2 2228 2396 -918 2293 113 7 0 chr5 73640920 73641220 -125988930 + AluSq SINE Alu 1 302 -11 419 275 130 38 chr5 73641518 73641780 -125988370 - L1MC/D LINE L1 -2230 5578 5293 206 77 0 51 chr5 73642571 73642610 -125987540 + (TTAA)n Simple_repeat Simple_repeat 3 39 0 2088 116 11 0 chr5 73642611 73642895 -125987255 - AluSx SINE Alu -25 287 1 234 0 0 0 chr5 73642975 73643001 -125987149 + (TATG)n Simple_repeat Simple_repeat 4 29 0 1572 94 10 0 chr5 73643001 73643204 -125986946 - AluSg/x SINE Alu -29 283 79 313 303 30 0 chr5 73643563 73643695 -125986455 + MER117 DNA MER1_type 15 150 -47 431 260 136 17 chr5 73643840 73644017 -125986133 + MIR SINE MIR 1 198 -64 24 0 0 0 chr5 73644481 73644505 -125985645 + AT_rich Low_complexity Low_complexity 1 24 0 789 173 18 36 chr5 73644505 73644673 -125985477 - FRAM SINE Alu -11 165 1 4043 176 60 9 chr5 73645011 73646115 -125984035 + L1MB5 LINE L1 4981 6141 -33 2049 174 35 30 chr5 73646175 73646634 -125983516 + MLT1C LTR MaLR 3 463 -4 2383 71 0 3 chr5 73648318 73648613 -125981537 + AluY SINE Alu 2 295 -16 211 286 176 17 chr5 73648780 73648899 -125981251 - MIR SINE MIR -42 220 83 380 237 79 9 chr5 73649315 73649429 -125980721 - L2 LINE L2 -2 3311 3190 233 371 155 0 chr5 73650888 73650985 -125979165 + MER91A DNA MER1_type 49 160 -36 240 266 47 0 chr5 73650988 73651052 -125979098 + MER91A DNA MER1_type 124 190 0 289 298 89 55 chr5 73651231 73651647 -125978503 + L1M4 LINE L1 4733 5162 -984 2075 131 0 0 chr5 73651650 73651980 -125978170 + AluSq SINE Alu 1 330 0 2327 250 84 17 chr5 73652263 73653240 -125976910 + L1M4 LINE L1 3485 4526 -1620 627 218 62 44 chr5 73653239 73653464 -125976686 + L1MC4 LINE L1 7572 7800 -242 * 243 0 0 0 chr5 73653760 73653787 -125976363 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 440 232 21 0 chr5 73653869 73653964 -125976186 + MER58 DNA MER1_type 1 97 -118 2643 174 56 6 chr5 73653971 73654489 -125975661 + MER68 LTR ERV1 19 562 0 458 160 34 0 chr5 73654498 73654596 -125975554 + MER58 DNA MER1_type 112 2420 0 266 221 31 39 chr5 73654597 73654724 -125975426 + L1MC5 LINE L1 7805 7930 -31 6373 130 48 38 chr5 73655125 73655810 -125974340 - Tigger3b DNA MER2_type -1797 1231 527 2275 117 0 0 chr5 73655810 73656117 -125974033 + AluSx SINE Alu 1 307 -5 6373 130 48 38 chr5 73656117 73656649 -125973501 - Tigger3b DNA MER2_type -2501 527 2 7994 128 31 23 chr5 73656671 73657323 -125972827 + L1PA10 LINE L1 4044 4689 -1479 3713 75 8 19 chr5 73657323 73657842 -125972308 - LTR10D LTR ERV1 0 513 1 7994 128 31 23 chr5 73657842 73658489 -125971661 + L1PA10 LINE L1 4689 5330 -838 2240 115 0 0 chr5 73658489 73658785 -125971365 + AluY SINE Alu 2 297 -14 7994 128 31 23 chr5 73658785 73659145 -125971005 + L1PA10 LINE L1 5330 5686 -482 1811 77 0 0 chr5 73659145 73659365 -125970785 + AluSc SINE Alu 84 303 -6 7994 128 31 23 chr5 73659365 73659835 -125970315 + L1PA10 LINE L1 5686 6165 -3 2514 62 0 3 chr5 73659899 73660203 -125969947 + AluY SINE Alu 1 303 -8 628 268 79 74 chr5 73660415 73661056 -125969094 - L1ME3A LINE L1 -222 5948 5314 300 212 114 61 chr5 73661081 73661213 -125968937 - L1ME3A LINE L1 -875 5271 5133 774 165 0 0 chr5 73661216 73661337 -125968813 + FLAM_C SINE Alu 4 124 -19 281 26 0 26 chr5 73661394 73661433 -125968717 + (CAAAA)n Simple_repeat Simple_repeat 4 41 0 441 255 94 81 chr5 73661474 73662039 -125968111 - L1ME3A LINE L1 -1005 5141 4570 448 240 245 29 chr5 73662951 73663155 -125966995 - MIR SINE MIR -14 248 1 194 300 0 0 chr5 73663692 73663742 -125966408 + MIR SINE MIR 36 85 -123 23 33 0 0 chr5 73664143 73664173 -125965977 + AT_rich Low_complexity Low_complexity 1 30 0 243 383 65 19 chr5 73664808 73664962 -125965188 - MIR3 SINE MIR -28 180 20 231 273 15 30 chr5 73665259 73665325 -125964825 - L3 LINE CR1 -5 1572 1508 1761 159 3 41 chr5 73665867 73666181 -125963969 + AluJo SINE Alu 1 302 -10 366 265 59 7 chr5 73666506 73666642 -125963508 - L1MC4a LINE L1 -1921 5887 5745 587 271 7 0 chr5 73666686 73666826 -125963324 - L1MC4a LINE L1 -2148 5660 5520 1438 184 7 80 chr5 73667253 73667552 -125962598 - AluJo SINE Alu -30 282 6 1232 203 45 31 chr5 73667970 73668325 -125961825 + L1ME LINE L1 4637 4996 -1150 23 54 0 0 chr5 73668382 73668419 -125961731 + AT_rich Low_complexity Low_complexity 1 37 0 584 163 11 79 chr5 73668587 73668688 -125961462 + L1ME LINE L1 4998 5083 -1063 2034 110 55 31 chr5 73668688 73669014 -125961136 + MER1B DNA MER1_type 3 336 -1 584 163 11 79 chr5 73669014 73669090 -125961060 + L1ME LINE L1 5083 5163 -983 2156 127 16 0 chr5 73669091 73669398 -125960752 + AluSx SINE Alu 1 312 0 1000 238 124 1 chr5 73669430 73669733 -125960417 + L1ME LINE L1 5397 5734 -436 2326 76 3 13 chr5 73669941 73670243 -125959907 - AluY SINE Alu -12 299 1 1687 172 35 10 chr5 73671157 73671447 -125958703 - AluJb SINE Alu -15 297 1 194 318 94 24 chr5 73672297 73672382 -125957768 + MIR SINE MIR 91 181 -81 23 54 0 0 chr5 73672518 73672555 -125957595 + AT_rich Low_complexity Low_complexity 1 37 0 1647 173 164 2 chr5 73673051 73673472 -125956678 - Charlie4a DNA MER1_type -3 505 17 270 298 13 19 chr5 73673762 73673920 -125956230 + T-rich Low_complexity Low_complexity 2 158 0 189 0 0 0 chr5 73673937 73673958 -125956192 + (T)n Simple_repeat Simple_repeat 1 21 0 396 241 0 12 chr5 73675344 73675427 -125954723 + L2 LINE L2 3182 3263 -9 180 0 0 0 chr5 73676049 73676069 -125954081 + (CAA)n Simple_repeat Simple_repeat 2 21 0 286 221 21 42 chr5 73676287 73676382 -125953768 - L1MC/D LINE L1 -2036 5772 5680 1102 166 104 0 chr5 73676557 73676768 -125953382 + MER46A DNA MER2_type 1 233 -3 228 35 0 0 chr5 73676769 73676798 -125953352 + (TG)n Simple_repeat Simple_repeat 2 30 0 586 291 186 10 chr5 73676803 73677216 -125952934 + L1MC4a LINE L1 5446 5931 -1877 233 364 91 7 chr5 73678127 73678281 -125951869 + MIR SINE MIR 40 206 -56 386 259 207 26 chr5 73678726 73678919 -125951231 + MIR SINE MIR 35 262 0 23 0 0 0 chr5 73679550 73679573 -125950577 + AT_rich Low_complexity Low_complexity 1 23 0 5653 120 33 13 chr5 73679685 73680234 -125949916 + L1PA16 LINE L1 5044 5581 -585 2115 17 0 0 chr5 73680234 73680471 -125949679 + AluYb8 SINE Alu 78 314 -4 5653 120 33 13 chr5 73680471 73681013 -125949137 + L1PA16 LINE L1 5581 6164 -2 186 103 0 0 chr5 73681034 73681063 -125949087 + (A)n Simple_repeat Simple_repeat 1 29 0 1925 263 319 12 chr5 73681483 73682566 -125947584 + L2 LINE L2 1300 2715 -599 242 290 110 58 chr5 73683991 73684146 -125946004 - MER5B DNA MER1_type 0 178 16 349 330 126 41 chr5 73684239 73684748 -125945402 + L1MEd LINE L1 88 639 -5566 440 264 17 68 chr5 73684763 73685048 -125945102 + L1MA10 LINE L1 5909 6332 -2 382 198 125 10 chr5 73685053 73685149 -125945001 + L1MEd LINE L1 1040 1146 -5059 308 276 120 58 chr5 73685152 73685503 -125944647 + L1MEd LINE L1 1252 1637 -4759 808 169 0 0 chr5 73685503 73685633 -125944517 + FLAM_A SINE Alu 4 133 0 308 276 120 58 chr5 73685633 73685715 -125944435 + L1MEd LINE L1 1637 1712 -4684 365 261 181 21 chr5 73686003 73686408 -125943742 + L1MEd LINE L1 2144 2565 -3650 235 138 35 17 chr5 73687250 73687308 -125942842 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 1530 253 88 25 chr5 73687885 73688677 -125941473 + L1MC5 LINE L1 7062 7903 -58 769 216 64 90 chr5 73688686 73688804 -125941346 + L1MC5 LINE L1 7502 7622 -339 2009 113 17 3 chr5 73688804 73689104 -125941046 + AluSg SINE Alu 1 304 -6 769 216 64 90 chr5 73689104 73689373 -125940777 + L1MC5 LINE L1 7622 7879 -82 591 241 128 5 chr5 73689410 73689605 -125940545 + L1ME3A LINE L1 5944 6162 -8 1997 98 21 3 chr5 73691004 73691291 -125938859 - AluSg SINE Alu -18 292 1 445 297 28 7 chr5 73691596 73691741 -125938409 + MER20B DNA MER1_type 30 177 -606 3011 246 111 38 chr5 73691741 73693132 -125937018 + L1MC4 LINE L1 6490 7991 -51 2530 131 57 0 chr5 73693132 73693536 -125936614 + MSTC LTR MaLR 2 428 0 3011 246 111 38 chr5 73693536 73693582 -125936568 + L1MC4 LINE L1 7991 8032 -10 1942 110 7 11 chr5 73693584 73693892 -125936258 + AluSx SINE Alu 2 308 0 1021 245 92 42 chr5 73693959 73694353 -125935797 + MER20B DNA MER1_type 225 651 -132 2247 93 7 3 chr5 73694353 73694644 -125935506 - AluSg SINE Alu -13 297 6 1021 245 92 42 chr5 73694644 73694751 -125935399 + MER20B DNA MER1_type 651 751 -32 1706 174 38 14 chr5 73696124 73696412 -125933738 - 7SLRNA srpRNA srpRNA -20 300 6 240 311 40 0 chr5 73696734 73696808 -125933342 + L2 LINE L2 3196 3272 0 3791 177 20 63 chr5 73696828 73697050 -125933100 + L1MB8 LINE L1 5146 5376 -802 1809 148 0 0 chr5 73697050 73697314 -125932836 + AluJb SINE Alu 47 310 -2 3791 177 20 63 chr5 73697314 73698092 -125932058 + L1MB8 LINE L1 5376 6108 -70 2153 115 10 3 chr5 73698092 73698397 -125931753 - AluSq SINE Alu -6 307 1 3791 177 20 63 chr5 73698397 73698466 -125931684 + L1MB8 LINE L1 6108 6178 0 2400 93 3 0 chr5 73698477 73698787 -125931363 + AluSp SINE Alu 1 311 -2 21 0 0 0 chr5 73699080 73699101 -125931049 + AT_rich Low_complexity Low_complexity 1 21 0 2133 99 16 26 chr5 73699104 73699407 -125930743 - AluSp SINE Alu -13 300 1 819 143 0 0 chr5 73699410 73699536 -125930614 - AluSg/x SINE Alu -5 305 180 818 241 56 44 chr5 73699536 73699655 -125930495 + MER2 DNA MER2_type 23 139 -206 1140 118 95 24 chr5 73699655 73699866 -125930284 + MER30 DNA MER1_type 3 228 -2 818 241 56 44 chr5 73699866 73700065 -125930085 + MER2 DNA MER2_type 139 345 0 2205 86 21 0 chr5 73700242 73700533 -125929617 + AluSp SINE Alu 1 297 -16 2238 75 16 10 chr5 73701261 73701568 -125928582 - AluSg SINE Alu 0 310 2 2268 60 3 3 chr5 73702526 73702831 -125927319 - AluSg SINE Alu 0 305 1 534 277 129 5 chr5 73702997 73703199 -125926951 - MIR SINE MIR -34 228 2 186 150 0 50 chr5 73703415 73703455 -125926695 - MIR SINE MIR -57 151 114 250 233 0 0 chr5 73704265 73704325 -125925825 + MER5A DNA MER1_type 12 71 -118 397 224 86 40 chr5 73704380 73704532 -125925618 + MER112 DNA MER1_type 4 162 -98 1736 192 14 0 chr5 73704598 73704890 -125925260 + AluJb SINE Alu 1 296 -16 310 199 43 75 chr5 73704890 73705051 -125925099 + L1MC5 LINE L1 7757 7912 -49 1412 148 79 45 chr5 73705367 73705657 -125924493 - AluJo SINE Alu -8 304 5 2260 112 0 0 chr5 73706651 73706947 -125923203 - AluSx SINE Alu -16 296 1 310 271 194 7 chr5 73707136 73707291 -125922859 - MIR SINE MIR -50 212 29 329 333 36 0 chr5 73708012 73708123 -125922027 - MER5B DNA MER1_type 0 178 64 202 336 92 8 chr5 73708494 73708625 -125921525 + L2 LINE L2 2148 2289 -1025 182 278 0 56 chr5 73708620 73708674 -125921476 - L2 LINE L2 0 3272 3222 * 192 389 49 33 chr5 73708798 73709042 -125921108 + L2 LINE L2 2430 2677 -637 2099 124 6 25 chr5 73709181 73709496 -125920654 - AluSx SINE Alu -3 309 1 329 174 121 47 chr5 73709578 73709727 -125920423 + L1ME4a LINE L1 5961 6120 -1 805 279 119 34 chr5 73709815 73710300 -125919850 - MLT1H LTR MaLR 0 549 19 333 309 63 6 chr5 73710435 73710610 -125919540 - L1ME4a LINE L1 -259 5862 5678 312 261 11 23 chr5 73710629 73710717 -125919433 - L1ME4a LINE L1 -497 5624 5538 736 241 59 11 chr5 73711414 73711601 -125918549 - MIR SINE MIR -65 197 2 2392 69 0 26 chr5 73711658 73711964 -125918186 - AluY SINE Alu -13 298 1 200 244 22 0 chr5 73712874 73712919 -125917231 + L2 LINE L2 3230 3275 -38 429 294 81 15 chr5 73713578 73713714 -125916436 - MIR SINE MIR -13 249 105 237 278 43 90 chr5 73713996 73714295 -125915855 + L1ME4a LINE L1 5836 6120 -1 834 191 165 13 chr5 73714529 73714765 -125915385 + MER33 DNA MER1_type 26 297 -27 440 243 278 67 chr5 73714883 73715254 -125914896 + L2 LINE L2 2839 3287 -26 1591 139 57 4 chr5 73715333 73715577 -125914573 + L1MA8 LINE L1 5994 6256 -35 1579 152 9 67 chr5 73715577 73715892 -125914258 - AluJo SINE Alu -15 297 1 1591 139 57 4 chr5 73715892 73715927 -125914223 + L1MA8 LINE L1 6256 6288 -3 2457 82 3 0 chr5 73716270 73716575 -125913575 - AluSg SINE Alu -4 306 1 2688 7 0 0 chr5 73716916 73717201 -125912949 + AluYb8 SINE Alu 23 307 -11 304 261 202 25 chr5 73718118 73718237 -125911913 + L2 LINE L2 3132 3271 -1 1402 83 0 11 chr5 73718276 73718457 -125911693 + AluSg/x SINE Alu 124 302 -10 215 382 0 0 chr5 73718733 73718801 -125911349 + MIR SINE MIR 16 83 -125 858 198 125 16 chr5 73718870 73719062 -125911088 - MER58C DNA MER1_type -2 213 1 2233 113 10 0 chr5 73719240 73719542 -125910608 + AluSx SINE Alu 1 305 -7 347 313 8 15 chr5 73720881 73721015 -125909135 - MIR3 SINE MIR -28 180 48 428 274 91 97 chr5 73721342 73721795 -125908355 - L1M4 LINE L1 -3556 2590 2141 392 323 41 18 chr5 73722081 73722301 -125907849 - HAL1b LINE L1 -418 930 706 578 207 9 113 chr5 73722378 73722591 -125907559 - HAL1b LINE L1 -767 581 391 1394 100 4 108 chr5 73722679 73722930 -125907220 - AluSg/x SINE Alu 0 310 86 1055 104 7 0 chr5 73722930 73723065 -125907085 - AluSq/x SINE Alu -171 141 6 1553 173 20 37 chr5 73723183 73723483 -125906667 + AluJo SINE Alu 1 295 -17 2333 97 0 10 chr5 73723487 73723833 -125906317 + AluY SINE Alu 1 343 0 25 31 0 0 chr5 73724803 73724835 -125905315 + AT_rich Low_complexity Low_complexity 1 32 0 383 286 38 0 chr5 73725152 73725257 -125904893 + MIR SINE MIR 153 261 -1 2132 106 3 10 chr5 73725958 73726250 -125903900 + AluSc SINE Alu 1 290 -19 451 271 75 32 chr5 73726269 73726351 -125903799 + MIR SINE MIR 67 144 -118 8093 89 9 22 chr5 73726351 73727436 -125902714 - MER11C LTR ERVK 0 1071 1 451 271 75 32 chr5 73727436 73727541 -125902609 + MIR SINE MIR 144 262 0 320 283 65 49 chr5 73728769 73728927 -125901223 - MIR SINE MIR -69 139 17 2060 144 0 3 chr5 73729130 73729428 -125900722 + AluSx SINE Alu 1 297 -15 449 288 81 6 chr5 73729758 73729918 -125900232 - L3b LINE CR1 -172 1411 1240 1065 295 90 43 chr5 73730720 73731208 -125898942 - MLT1J LTR MaLR 0 511 1 1987 211 79 12 chr5 73731909 73732340 -125897810 - LTR40b LTR ERVL 0 462 3 344 239 0 0 chr5 73732572 73732639 -125897511 + L1ME LINE L1 5589 5655 -466 1979 125 57 17 chr5 73733214 73733567 -125896583 - THE1C LTR MaLR -8 367 1 438 282 69 40 chr5 73733664 73733838 -125896312 - MIR SINE MIR -63 199 21 2142 98 0 0 chr5 73733877 73734153 -125895997 - AluSc SINE Alu -13 296 21 860 293 124 8 chr5 73734737 73735099 -125895051 + L2 LINE L2 1293 1696 -1618 1370 276 111 58 chr5 73735099 73735851 -125894299 + L1MC4a LINE L1 4478 4839 -1307 2025 105 70 0 chr5 73735851 73736136 -125894014 + AluSc SINE Alu 1 305 -4 1370 276 111 58 chr5 73736136 73736726 -125893424 + L1MC4a LINE L1 4839 5396 -750 537 136 104 8 chr5 73736809 73736934 -125893216 - L1 LINE L1 -1770 4376 4240 785 198 47 0 chr5 73736935 73737127 -125893023 + L1MA7 LINE L1 6084 6284 -7 36 23 0 0 chr5 73737136 73737179 -125892971 + AT_rich Low_complexity Low_complexity 1 43 0 230 274 49 85 chr5 73737198 73737362 -125892788 + L1MC4a LINE L1 6084 6241 -1567 986 328 120 12 chr5 73738765 73739357 -125890793 + L2 LINE L2 2188 2843 -471 1235 163 195 16 chr5 73739578 73739829 -125890321 - AluJo SINE Alu -6 296 1 195 289 48 24 chr5 73741262 73741345 -125888805 - MIR3 SINE MIR 0 208 124 487 286 8 0 chr5 73741345 73741478 -125888672 + BSR/Beta Satellite Satellite 5 138 -14 210 290 129 16 chr5 73741494 73741556 -125888594 - MIR3 SINE MIR -131 77 9 534 189 63 0 chr5 73741640 73741767 -125888383 + MIR SINE MIR 118 252 -10 2097 130 0 19 chr5 73742402 73742717 -125887433 - AluSx SINE Alu -3 309 1 836 257 196 24 chr5 73742913 73743355 -125886795 - MLT1G1 LTR MaLR -1 594 26 404 320 79 38 chr5 73743389 73743793 -125886357 + L2 LINE L2 2725 3257 -15 1879 184 50 3 chr5 73743893 73744236 -125885914 + MLT1A1 LTR MaLR 7 365 0 219 333 30 0 chr5 73744421 73744520 -125885630 - L2 LINE L2 -1 3312 3211 912 225 17 0 chr5 73744981 73745154 -125884996 - MER5A DNA MER1_type -7 182 7 223 218 40 79 chr5 73745977 73746078 -125884072 - L2 LINE L2 -90 3223 3127 234 379 0 0 chr5 73746400 73746487 -125883663 - MIR SINE MIR -82 180 94 2037 129 0 7 chr5 73747662 73747968 -125882182 + AluSq SINE Alu 1 304 0 701 273 88 5 chr5 73747970 73748175 -125881975 - MIR SINE MIR -25 237 16 272 295 276 26 chr5 73751988 73752144 -125878006 + MER91A DNA MER1_type 2 196 0 849 202 195 23 chr5 73752184 73752589 -125877561 + L2 LINE L2 2715 3196 -117 242 329 0 0 chr5 73752644 73752720 -125877430 + MER58 DNA MER1_type 173 248 -2172 * 521 177 0 0 chr5 73752712 73752791 -125877359 + MER58 DNA MER1_type 2342 2420 0 489 170 53 0 chr5 73752793 73752887 -125877263 + L2 LINE L2 3191 3289 -24 485 231 46 0 chr5 73752887 73752995 -125877155 - MER20 DNA MER1_type -105 114 2 2073 99 3 24 chr5 73753056 73753383 -125876767 + AluSg SINE Alu 1 310 0 1271 200 46 68 chr5 73753653 73754023 -125876127 + L1ME1 LINE L1 5788 6149 -17 281 384 23 0 chr5 73755382 73755515 -125874635 - MIR SINE MIR -94 168 33 295 300 152 42 chr5 73755710 73755947 -125874203 + L2 LINE L2 3005 3267 -5 398 257 138 13 chr5 73756008 73756160 -125873990 + MIR SINE MIR 89 259 -3 2551 186 65 29 chr5 73756162 73756683 -125873467 + MLT1F LTR MaLR 3 542 0 1133 152 14 29 chr5 73758729 73758939 -125871211 - AluJo SINE Alu -94 218 12 441 252 42 17 chr5 73760095 73760214 -125869936 + MIR SINE MIR 17 138 -70 4878 176 43 10 chr5 73761026 73761860 -125868290 + MER21B LTR ERV1 1 862 -1 258 254 18 0 chr5 73762518 73762595 -125867555 + MIR SINE MIR 71 139 -69 271 306 131 22 chr5 73762661 73762844 -125867306 + MIR3 SINE MIR 3 205 -3 2229 109 6 6 chr5 73764260 73764571 -125865579 + AluSx SINE Alu 1 311 -1 416 308 134 18 chr5 73764582 73765068 -125865082 + L1MC4a LINE L1 5328 5555 -804 317 229 56 35 chr5 73765313 73765457 -125864693 + L1ME4a LINE L1 5974 6120 -1 280 249 221 17 chr5 73766166 73766347 -125863803 + L2 LINE L2 2566 2783 -531 2286 122 0 0 chr5 73767079 73767391 -125862759 - AluSx SINE Alu 0 312 1 220 271 62 31 chr5 73767575 73767671 -125862479 + MIR SINE MIR 31 129 -133 357 75 0 0 chr5 73768273 73768326 -125861824 + (TC)n Simple_repeat Simple_repeat 2 54 0 243 0 0 0 chr5 73768326 73768353 -125861797 + (CA)n Simple_repeat Simple_repeat 1 27 0 180 278 0 56 chr5 73768753 73768825 -125861325 - L3 LINE CR1 -803 774 707 293 308 135 0 chr5 73768917 73769021 -125861129 - L2 LINE L2 -3 3310 3193 522 308 44 22 chr5 73769095 73769322 -125860828 + MIR SINE MIR 20 251 -11 550 306 133 21 chr5 73770303 73770870 -125859280 - L2 LINE L2 -56 3257 2566 201 167 0 0 chr5 73771331 73771367 -125858783 + (TG)n Simple_repeat Simple_repeat 1 36 0 2276 102 3 3 chr5 73771964 73772267 -125857883 - AluSq SINE Alu -10 303 1 1531 242 45 11 chr5 73773073 73773429 -125856721 + MLT1A2 LTR MaLR 1 368 -6 2100 212 63 18 chr5 73774839 73775717 -125854433 - L1MB7 LINE L1 -19 6165 5101 423 159 0 0 chr5 73776056 73776119 -125854031 + FLAM_A SINE Alu 59 121 -21 190 343 69 10 chr5 73776381 73776483 -125853667 + MIR SINE MIR 36 143 -65 1850 82 122 4 chr5 73777222 73777500 -125852650 + AluSq SINE Alu 1 308 0 245 212 119 34 chr5 73777951 73778069 -125852081 + LTR33 LTR ERVL 2 129 -392 1565 189 0 26 chr5 73779001 73779313 -125850837 + AluJb SINE Alu 1 304 -8 3337 87 22 24 chr5 73779527 73779989 -125850161 - MER4C LTR ERV1 -4 461 1 225 132 0 0 chr5 73780130 73780168 -125849982 + (T)n Simple_repeat Simple_repeat 1 38 0 210 158 0 26 chr5 73781796 73781834 -125848316 + CT-rich Low_complexity Low_complexity 2 38 0 390 276 53 128 chr5 73781838 73782218 -125847932 + L2 LINE L2 2818 3154 -118 4244 130 50 43 chr5 73782218 73782940 -125847210 + LTR8A LTR ERV1 1 727 0 390 276 53 128 chr5 73782940 73783051 -125847099 + L2 LINE L2 3154 3272 0 1740 191 0 3 chr5 73783187 73783481 -125846669 + AluJo SINE Alu 1 293 -19 410 224 224 0 chr5 73785240 73785392 -125844758 + MIR SINE MIR 10 195 -67 191 280 20 0 chr5 73785397 73785447 -125844703 - MER5A DNA MER1_type -3 186 136 475 291 38 13 chr5 73785680 73785838 -125844312 - MIR SINE MIR -94 168 7 1056 158 6 0 chr5 73785924 73786089 -125844061 + MER5A DNA MER1_type 6 171 -18 251 250 0 0 chr5 73786546 73786598 -125843552 + LTR30 LTR ERV1 1 52 -670 1205 120 49 26 chr5 73786598 73786824 -125843326 + LTR12 LTR ERV1 55 1983 -455 281 300 10 0 chr5 73786911 73787011 -125843139 + LTR30 LTR ERV1 524 624 -98 699 191 32 0 chr5 73787012 73787138 -125843012 + LTR12 LTR ERV1 360 489 -225 417 189 0 0 chr5 73787316 73787390 -125842760 + FLAM_A SINE Alu 59 132 -10 473 242 118 7 chr5 73788362 73788515 -125841635 - MIR SINE MIR -11 251 82 510 276 77 11 chr5 73788851 73789032 -125841118 - MIR SINE MIR -1 261 69 215 219 0 0 chr5 73790186 73790227 -125839923 + (CTTA)n Simple_repeat Simple_repeat 1 41 0 2116 196 44 15 chr5 73790792 73791246 -125838904 - MLT1C LTR MaLR 0 467 1 345 228 72 111 chr5 73791380 73791560 -125838590 - LTR33A LTR ERVL -1 522 350 362 271 99 17 chr5 73791742 73791923 -125838227 - L1ME4a LINE L1 -1 6120 5925 228 286 39 0 chr5 73791987 73792064 -125838086 - L1ME4a LINE L1 -2005 5803 5724 256 242 186 16 chr5 73792066 73792190 -125837960 - L2 LINE L2 -148 3165 3021 192 306 0 0 chr5 73792913 73792962 -125837188 + L2 LINE L2 3201 3249 -23 1197 279 62 11 chr5 73794294 73794728 -125835422 - L2 LINE L2 -2 3311 2856 400 281 6 56 chr5 73794707 73794867 -125835283 - L2 LINE L2 -665 2649 2498 * 1196 211 244 4 chr5 73794908 73795421 -125834729 - L2 LINE L2 -991 2323 1688 417 294 128 11 chr5 73795620 73795902 -125834248 - L1ME4a LINE L1 -208 5913 5599 21 0 0 0 chr5 73796141 73796162 -125833988 + AT_rich Low_complexity Low_complexity 1 21 0 315 0 0 0 chr5 73797483 73797518 -125832632 + (TG)n Simple_repeat Simple_repeat 2 36 0 276 356 72 14 chr5 73797876 73798084 -125832066 - L3 LINE CR1 -2 1575 1356 583 180 308 50 chr5 73798367 73798416 -125831734 - MIR SINE MIR -9 253 218 261 0 0 0 chr5 73798416 73798445 -125831705 + (TG)n Simple_repeat Simple_repeat 2 30 0 583 180 308 50 chr5 73798445 73798581 -125831569 - MIR SINE MIR -44 218 118 686 225 104 17 chr5 73798581 73798754 -125831396 - MER5A DNA MER1_type 0 189 2 583 180 308 50 chr5 73798754 73798769 -125831381 - MIR SINE MIR -144 118 9 902 168 31 0 chr5 73800245 73800406 -125829744 - AluJo SINE Alu -15 297 132 248 0 0 30 chr5 73800406 73800439 -125829711 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 2247 71 0 0 chr5 73800439 73800720 -125829430 - AluY SINE Alu -30 281 1 445 195 46 0 chr5 73800770 73800857 -125829293 - AluJo SINE Alu -173 139 49 21 0 0 0 chr5 73801088 73801109 -125829041 + AT_rich Low_complexity Low_complexity 1 21 0 552 293 164 33 chr5 73801174 73801509 -125828641 - L3 LINE CR1 -412 1165 787 470 307 67 36 chr5 73801767 73801992 -125828158 - L3 LINE CR1 -825 752 521 2445 60 0 19 chr5 73801993 73802310 -125827840 + AluY SINE Alu 1 311 0 897 127 0 0 chr5 73802541 73802659 -125827491 + FLAM_C SINE Alu 1 118 -15 21 0 0 0 chr5 73802659 73802680 -125827470 + AT_rich Low_complexity Low_complexity 1 21 0 210 366 45 9 chr5 73802695 73802807 -125827343 - L3 LINE CR1 -1383 194 79 255 257 0 59 chr5 73803480 73803581 -125826569 - LTR67 LTR ERVL -2 555 461 8355 95 32 75 chr5 73803673 73805031 -125825119 - HSMAR2 DNA Mariner -2 1300 2 262 289 22 44 chr5 73805036 73805126 -125825024 - LTR67 LTR ERVL -356 201 114 * 277 312 11 65 chr5 73805069 73805255 -125824895 - MLT1K LTR MaLR -411 177 2 727 189 85 34 chr5 73807918 73808128 -125822022 + MLT1F LTR MaLR 367 528 -14 418 243 92 58 chr5 73808292 73808465 -125821685 - L1MC/D LINE L1 -2009 5799 5621 730 235 69 40 chr5 73809153 73809400 -125820750 + MER112 DNA MER1_type 1 254 -2 702 284 76 13 chr5 73810044 73810280 -125819870 - MIR SINE MIR 0 262 12 280 295 39 54 chr5 73810290 73810419 -125819731 - MIR SINE MIR -124 138 12 480 293 0 38 chr5 73811169 73811302 -125818848 + L2 LINE L2 3145 3272 0 2874 132 16 16 chr5 73811890 73812322 -125817828 + MSTB1 LTR MaLR 1 432 0 22 0 0 0 chr5 73812463 73812485 -125817665 + AT_rich Low_complexity Low_complexity 1 22 0 4029 149 31 44 chr5 73812574 73812799 -125817351 + L1MB4 LINE L1 5423 5649 -531 1204 179 279 24 chr5 73812799 73813140 -125817010 + MSTC LTR MaLR 1 428 0 4029 149 31 44 chr5 73813140 73813658 -125816492 + L1MB4 LINE L1 5649 6158 -22 1910 132 19 42 chr5 73813658 73813968 -125816182 - AluSx SINE Alu -9 303 1 4029 149 31 44 chr5 73813968 73813988 -125816162 + L1MB4 LINE L1 6158 6177 -3 256 103 0 0 chr5 73814015 73814054 -125816096 - L1MB3 LINE L1 -77 6106 6068 302 363 50 19 chr5 73814216 73814376 -125815774 - L1M4b LINE L1 -6466 393 229 665 268 86 18 chr5 73814415 73814635 -125815515 - L1M4b LINE L1 -6613 246 12 243 152 0 0 chr5 73816465 73816511 -125813639 + A-rich Low_complexity Low_complexity 1 46 0 402 311 111 17 chr5 73817466 73817646 -125812504 + L2 LINE L2 2570 2766 -548 189 0 0 0 chr5 73818023 73818044 -125812106 + (TA)n Simple_repeat Simple_repeat 2 22 0 459 314 43 0 chr5 73818046 73818186 -125811964 + L2 LINE L2 2927 3072 -241 1149 336 87 49 chr5 73818206 73819399 -125810751 + ERVL LTR ERVL 3959 5197 -567 1812 182 29 18 chr5 73819410 73819782 -125810368 - MLT1A2 LTR MaLR 0 549 1 989 281 110 13 chr5 73820069 73820460 -125809690 + LTR16A LTR ERVL 14 442 -8 2476 82 10 0 chr5 73820741 73821047 -125809103 - AluSc SINE Alu 0 309 1 680 290 48 0 chr5 73821074 73821281 -125808869 - MIR SINE MIR -26 236 20 632 225 23 0 chr5 73822390 73822519 -125807631 + MER94 DNA DNA 1 132 -2 683 267 6 35 chr5 73824048 73824220 -125805930 + MER5B DNA MER1_type 7 173 -5 2240 110 0 16 chr5 73824385 73824694 -125805456 - AluSx SINE Alu -8 304 1 600 265 72 24 chr5 73826192 73826441 -125803709 + L1ME LINE L1 5548 5808 -313 447 277 61 20 chr5 73827854 73828002 -125802148 + MIR SINE MIR 22 175 -87 463 333 37 4 chr5 73828522 73828703 -125801447 + MIR SINE MIR 4 186 -66 757 260 62 21 chr5 73829498 73829740 -125800410 - MIR SINE MIR -10 252 1 1965 118 42 10 chr5 73830982 73831270 -125798880 - AluSx SINE Alu -15 297 1 185 300 100 0 chr5 73831465 73831545 -125798605 + L2 LINE L2 3220 3307 -6 21 57 0 0 chr5 73833062 73833097 -125797053 + AT_rich Low_complexity Low_complexity 1 35 0 409 235 98 8 chr5 73833188 73833320 -125796830 + MIR SINE MIR 119 262 0 195 129 0 0 chr5 73833984 73834015 -125796135 + (GA)n Simple_repeat Simple_repeat 2 32 0 188 258 161 32 chr5 73834865 73834958 -125795192 + L3b LINE CR1 1290 1394 -189 704 259 78 6 chr5 73836629 73836795 -125793355 + MER45A DNA AcHobo 1 178 0 1843 265 62 14 chr5 73837531 73838301 -125791849 - L1M4 LINE L1 -2475 3671 2865 4383 163 27 15 chr5 73839905 73840711 -125789439 - L1MA6 LINE L1 -1 6299 5484 1006 239 153 88 chr5 73842259 73842828 -125787322 - L2 LINE L2 -559 2755 2150 564 364 61 14 chr5 73844333 73844627 -125785523 + L2 LINE L2 2931 3238 -75 21 0 0 0 chr5 73844857 73844878 -125785272 + AT_rich Low_complexity Low_complexity 1 21 0 493 340 37 46 chr5 73845423 73845858 -125784292 + L2 LINE L2 1747 2177 -1137 3554 191 26 17 chr5 73846546 73846734 -125783416 - L1 LINE L1 -3034 3112 2927 1778 143 3 38 chr5 73846734 73847054 -125783096 + AluSx SINE Alu 1 310 0 3554 191 26 17 chr5 73847054 73847629 -125782521 - L1 LINE L1 -3219 2927 2341 234 0 0 0 chr5 73849530 73849556 -125780594 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 37 69 0 0 chr5 73849776 73849848 -125780302 + AT_rich Low_complexity Low_complexity 1 72 0 25 31 0 0 chr5 73849967 73849999 -125780151 + AT_rich Low_complexity Low_complexity 1 32 0 6498 106 6 2 chr5 73850145 73851050 -125779100 + L1P3 LINE L1 129 1036 -5425 4092 85 4 0 chr5 73851048 73851591 -125778559 + L1P LINE L1 3966 4510 -1636 * 354 85 0 0 chr5 73851591 73851638 -125778512 + Alu SINE Alu 243 289 -13 231 306 274 19 chr5 73851638 73851795 -125778355 + L1MCc LINE L1 411 607 -5816 6048 176 59 10 chr5 73851986 73852961 -125777189 + L1 LINE L1 3274 4325 -1821 1670 180 14 3 chr5 73852961 73853255 -125776895 - AluSq SINE Alu -16 297 1 6048 176 59 10 chr5 73853255 73853527 -125776623 + L1 LINE L1 4325 4582 -1564 728 236 7 0 chr5 73853628 73853776 -125776374 - L1MCa LINE L1 -6273 153 5 1256 221 74 21 chr5 73853806 73854131 -125776019 - MER2 DNA MER2_type 0 344 3 714 112 147 0 chr5 73854688 73854804 -125775346 + L1MCa LINE L1 392 524 -5902 219 139 0 0 chr5 73855125 73855161 -125774989 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 862 141 36 12 chr5 73855177 73855491 -125774659 + CT-rich Low_complexity Low_complexity 1 321 0 387 198 111 48 chr5 73855548 73855674 -125774476 - MIR SINE MIR -10 252 119 702 286 28 0 chr5 73857847 73858025 -125772125 + MIR SINE MIR 73 255 -7 209 319 130 51 chr5 73858052 73858306 -125771844 + L3 LINE CR1 472 745 -832 223 227 160 0 chr5 73858327 73858402 -125771748 + MIR SINE MIR 71 157 -105 235 300 169 6 chr5 73861135 73861295 -125768855 + L3b LINE CR1 1323 1508 -75 1866 198 7 66 chr5 73861748 73862294 -125767856 + MLT2B2 LTR ERVL 1 515 -38 287 241 9 65 chr5 73862549 73862657 -125767493 + MER113 DNA MER1_type? 5 106 -415 21 57 0 0 chr5 73862749 73862784 -125767366 + AT_rich Low_complexity Low_complexity 1 35 0 312 286 66 0 chr5 73863081 73863172 -125766978 + MIR SINE MIR 151 247 -15 191 322 130 9 chr5 73863798 73863913 -125766237 - L2 LINE L2 -12 3301 3173 517 286 42 42 chr5 73864655 73864868 -125765282 + MIR SINE MIR 7 219 -43 264 301 36 0 chr5 73864950 73865033 -125765117 - L2 LINE L2 0 3272 3187 194 238 168 59 chr5 73865099 73865200 -125764950 - MIR SINE MIR -125 137 26 851 81 8 32 chr5 73865705 73865829 -125764321 - AluSp SINE Alu -175 138 18 1288 103 0 0 chr5 73865829 73866004 -125764146 + AluSp SINE Alu 136 310 -3 217 302 0 16 chr5 73867575 73867638 -125762512 + MIR SINE MIR 23 84 -124 743 243 120 33 chr5 73867724 73867962 -125762188 + MIR SINE MIR 4 260 -2 2216 83 0 13 chr5 73868291 73868467 -125761683 - AluY SINE Alu -14 297 125 189 0 0 0 chr5 73868467 73868488 -125761662 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2216 83 0 13 chr5 73868488 73868612 -125761538 - AluY SINE Alu -186 125 1 284 364 0 0 chr5 73868782 73868881 -125761269 + MIR SINE MIR 3 101 -161 411 21 0 0 chr5 73869193 73869241 -125760909 + (TC)n Simple_repeat Simple_repeat 1 48 0 441 273 39 129 chr5 73870205 73870516 -125759634 + L2 LINE L2 2981 3263 -9 222 149 0 75 chr5 73870516 73870583 -125759567 + (GAGAA)n Simple_repeat Simple_repeat 4 65 0 2132 115 0 0 chr5 73870594 73870882 -125759268 + AluSx SINE Alu 23 310 -2 2063 158 89 20 chr5 73871208 73871657 -125758493 + MLT1D LTR MaLR 25 504 -1 1766 197 0 0 chr5 73873365 73873665 -125756485 - AluJb SINE Alu -12 300 1 2244 114 7 0 chr5 73874726 73875024 -125755126 + AluSp SINE Alu 1 300 -13 198 91 0 0 chr5 73875351 73875384 -125754766 + (A)n Simple_repeat Simple_repeat 1 33 0 35245 70 13 3 chr5 73876052 73881004 -125749146 + L1P LINE L1 3 5006 -1140 2772 168 41 0 chr5 73882485 73882973 -125747177 + MLT2B3 LTR ERVL 1 508 -46 1327 236 38 12 chr5 73883335 73883678 -125746472 + MLT1F LTR MaLR 128 479 -63 508 250 98 12 chr5 73883769 73883933 -125746217 + MIR SINE MIR 70 247 -15 678 151 59 19 chr5 73883936 73884105 -125746045 + MER104 DNA Tc2 1 176 -4 23 0 0 0 chr5 73884361 73884384 -125745766 + AT_rich Low_complexity Low_complexity 1 23 0 1737 117 139 0 chr5 73884398 73884664 -125745486 + AluSq SINE Alu 3 305 -8 1828 196 79 17 chr5 73884684 73885164 -125744986 - MLT2B1 LTR ERVL -7 513 4 661 148 20 0 chr5 73885325 73885426 -125744724 + FLAM_C SINE Alu 20 122 -21 357 24 0 0 chr5 73885426 73885468 -125744682 + (TA)n Simple_repeat Simple_repeat 2 43 0 1906 145 35 0 chr5 73885490 73885780 -125744370 + AluSx SINE Alu 1 300 -12 221 281 12 12 chr5 73885857 73885939 -125744211 + (TCTG)n Simple_repeat Simple_repeat 2 83 0 21 0 0 0 chr5 73886474 73886495 -125743655 + AT_rich Low_complexity Low_complexity 1 21 0 45 62 0 0 chr5 73886589 73886669 -125743481 + AT_rich Low_complexity Low_complexity 1 80 0 1061 225 159 4 chr5 73886777 73887035 -125743115 + AluJb SINE Alu 1 298 -4 2061 218 67 57 chr5 73887117 73888034 -125742116 + L1MC5 LINE L1 6448 7397 -564 1792 190 31 11 chr5 73888034 73888392 -125741758 - MLT1A1 LTR MaLR 0 365 1 2061 218 67 57 chr5 73888392 73888482 -125741668 + L1MC5 LINE L1 7397 7485 -476 228 182 0 0 chr5 73888495 73888539 -125741611 + (TA)n Simple_repeat Simple_repeat 2 45 0 1803 169 0 28 chr5 73888582 73888902 -125741248 - AluJb SINE Alu -1 311 1 765 236 126 37 chr5 73888908 73889289 -125740861 + L1MC5 LINE L1 7499 7913 -48 1390 207 14 120 chr5 73889839 73890355 -125739795 + MER45R DNA AcHobo 318 778 -803 673 184 10 148 chr5 73890359 73890555 -125739595 - FAM SINE Alu -10 175 7 3477 158 15 39 chr5 73890562 73890863 -125739287 + MER45R DNA AcHobo 770 1077 -504 719 111 28 0 chr5 73890863 73890971 -125739179 + HY1 scRNA scRNA 1 111 -1 3477 158 15 39 chr5 73890971 73891466 -125738684 + MER45R DNA AcHobo 1077 1547 -34 314 277 123 23 chr5 73891591 73891721 -125738429 - MIR3 SINE MIR -29 179 37 21 0 0 0 chr5 73891795 73891816 -125738334 + AT_rich Low_complexity Low_complexity 1 21 0 343 312 96 24 chr5 73891914 73892164 -125737986 - LTR33 LTR ERVL -253 268 1 1849 240 40 48 chr5 73893544 73894090 -125736060 - MLT1F LTR MaLR 0 542 1 1150 202 14 22 chr5 73894521 73894744 -125735406 - MER58A DNA MER1_type 0 224 4 310 341 38 15 chr5 73894889 73895021 -125735129 - MER89-int LTR ERV1 -1458 5343 5209 209 79 53 26 chr5 73895232 73895270 -125734880 + T-rich Low_complexity Low_complexity 2 40 0 2756 125 66 0 chr5 73895414 73895838 -125734312 + MER1A DNA MER1_type 1 452 -77 2407 99 0 0 chr5 73896090 73896392 -125733758 + AluSx SINE Alu 1 302 -10 792 118 42 0 chr5 73896900 73897044 -125733106 - L1MB2 LINE L1 0 6171 6022 2442 164 12 21 chr5 73897044 73897476 -125732674 + MSTC LTR MaLR 1 428 0 808 197 149 9 chr5 73897478 73897706 -125732444 + MSTC-int LTR MaLR 2 261 -1474 428 369 34 24 chr5 73897704 73898116 -125732034 + L1M3b LINE L1 2 417 -5864 * 757 255 63 0 chr5 73898656 73899005 -125731145 + L1M3b LINE L1 1124 1494 -4787 1602 222 16 21 chr5 73899155 73899543 -125730607 - MLT1F LTR MaLR -156 386 1 511 137 18 12 chr5 73900548 73900767 -125729383 + AluJo SINE Alu 11 301 -11 486 196 69 9 chr5 73900792 73900991 -125729159 - L1MCa LINE L1 -2323 4103 3807 270 193 0 0 chr5 73901007 73901064 -125729086 + CT-rich Low_complexity Low_complexity 3 59 0 3686 128 32 42 chr5 73901066 73901729 -125728421 - L1MC1 LINE L1 -1 6332 5677 1982 190 47 14 chr5 73901761 73902583 -125727567 - L1MCa LINE L1 -3530 2896 2039 3483 162 58 44 chr5 73902583 73903078 -125727072 - MER44D DNA MER2_type -1882 605 118 2091 119 18 21 chr5 73903078 73903415 -125726735 + MER1B DNA MER1_type 1 336 -1 3483 162 58 44 chr5 73903415 73903554 -125726596 - MER44D DNA MER2_type -2369 118 -18 657 0 0 0 chr5 73903554 73903627 -125726523 + (TATTG)n Simple_repeat Simple_repeat 4 76 0 2011 120 3 14 chr5 73903631 73903922 -125726228 - AluSx SINE Alu -24 288 1 3483 162 58 44 chr5 73903922 73904004 -125726146 - MER44D DNA MER2_type -2407 80 1 3855 138 71 13 chr5 73904004 73905053 -125725097 - L1MCa LINE L1 -4427 1999 811 397 264 73 39 chr5 73905058 73905236 -125724914 - L1M4 LINE L1 -1926 4220 4037 1428 138 5 5 chr5 73905248 73905458 -125724692 + AluSx SINE Alu 1 210 -102 1007 105 0 62 chr5 73905457 73905619 -125724531 + AluSg/x SINE Alu 154 305 -5 * 3641 159 65 65 chr5 73905685 73906490 -125723660 - L1MCa LINE L1 -5602 824 20 2837 230 42 33 chr5 73906495 73906662 -125723488 - L1M4 LINE L1 -2630 3516 3352 2358 118 15 51 chr5 73906662 73907051 -125723099 + THE1C LTR MaLR 1 375 0 2837 230 42 33 chr5 73907051 73907832 -125722318 - L1M4 LINE L1 -2794 3352 2559 503 328 167 20 chr5 73908438 73909011 -125721139 + L2 LINE L2 2424 3082 -190 490 277 67 67 chr5 73909054 73909110 -125721040 + MIR SINE MIR 2 57 -205 2159 94 10 7 chr5 73909110 73909408 -125720742 - AluSx SINE Alu -13 299 1 490 277 67 67 chr5 73909408 73909604 -125720546 + MIR SINE MIR 56 254 -8 1840 225 103 4 chr5 73910380 73910837 -125719313 - MLT1J LTR MaLR -8 503 2 5135 164 33 9 chr5 73911096 73911177 -125718973 + L1MB3 LINE L1 5096 5174 -1009 967 135 0 0 chr5 73911177 73911310 -125718840 + FLAM_C SINE Alu 1 133 0 5135 164 33 9 chr5 73911310 73912264 -125717886 + L1MB3 LINE L1 5174 6171 -12 30 0 0 0 chr5 73912264 73912294 -125717856 + AT_rich Low_complexity Low_complexity 1 30 0 518 197 116 61 chr5 73912660 73912807 -125717343 - MER58C DNA MER1_type 0 215 61 455 269 93 28 chr5 73913163 73913345 -125716805 + L1ME1 LINE L1 5513 5706 -464 595 274 39 7 chr5 73913376 73913529 -125716621 + MIR SINE MIR 47 204 -58 615 284 58 19 chr5 73913604 73913865 -125716285 + L1ME1 LINE L1 5695 5965 -205 12056 188 30 16 chr5 73914561 73915525 -125714625 + L1PA15 LINE L1 2568 3517 -2648 1857 177 3 0 chr5 73915525 73915825 -125714325 + AluJo SINE Alu 1 301 -11 12056 188 30 16 chr5 73915825 73918412 -125711738 + L1PA15 LINE L1 3517 6163 -2 11294 39 7 0 chr5 73918954 73921017 -125709133 - L1PA5 LINE L1 -8 6146 4071 315 250 40 0 chr5 73921022 73921122 -125709028 - L1M4 LINE L1 -966 5180 5077 964 182 0 6 chr5 73921126 73921285 -125708865 + AluSx SINE Alu 2 159 -153 267 386 23 0 chr5 73923985 73924117 -125706033 + MIR3 SINE MIR 50 184 -24 2695 46 0 0 chr5 73924325 73924632 -125705518 - AluY SINE Alu -4 307 1 336 207 215 16 chr5 73924976 73925097 -125705053 + MIR SINE MIR 105 249 -13 350 316 45 0 chr5 73928129 73928262 -125701888 - MIR3 SINE MIR -29 179 41 2129 125 0 16 chr5 73928824 73929163 -125700987 - AluSx SINE Alu 0 338 5 2259 115 3 0 chr5 73931095 73931400 -125698750 + AluSg SINE Alu 1 306 -4 324 282 99 25 chr5 73932098 73932300 -125697850 + MIR SINE MIR 4 220 -42 387 303 0 0 chr5 73932861 73932950 -125697200 + L2 LINE L2 3205 3293 -20 416 227 97 0 chr5 73935559 73935679 -125694471 + L1ME1 LINE L1 6031 6164 0 1305 194 110 0 chr5 73936080 73936178 -125693972 + AluJo SINE Alu 1 87 -225 219 69 0 0 chr5 73936178 73936207 -125693943 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1305 194 110 0 chr5 73936207 73936371 -125693779 + AluJo SINE Alu 87 292 -20 635 106 0 0 chr5 73938175 73938260 -125691890 - FLAM_A SINE Alu -16 126 42 282 352 80 16 chr5 73938404 73938529 -125691621 - L2 LINE L2 -4 3268 3136 382 265 128 21 chr5 73939498 73939732 -125690418 + MLT1J LTR MaLR 253 511 0 297 89 0 0 chr5 73940960 73941005 -125689145 + (CA)n Simple_repeat Simple_repeat 2 46 0 215 209 0 0 chr5 73941721 73941764 -125688386 - MIR3 SINE MIR -2 206 164 405 242 149 60 chr5 73942306 73942521 -125687629 + L2 LINE L2 3049 3282 -31 410 200 11 162 chr5 73942524 73942709 -125687441 + MER5B DNA MER1_type 22 178 0 339 268 0 0 chr5 73943966 73944037 -125686113 - MIR SINE MIR -112 150 80 1000 230 10 20 chr5 73944043 73944247 -125685903 - MER58A DNA MER1_type -22 202 1 478 281 53 8 chr5 73944672 73944855 -125685295 - MIR SINE MIR -65 143 4 886 127 0 42 chr5 73945597 73945739 -125684411 + AluJo SINE Alu 1 136 -176 21 36 0 0 chr5 73945739 73945767 -125684383 + AT_rich Low_complexity Low_complexity 1 28 0 345 216 69 0 chr5 73947637 73947739 -125682411 - L1ME4a LINE L1 -69 6052 5944 672 229 35 6 chr5 73947779 73947949 -125682201 - L1ME4a LINE L1 -404 5717 5543 342 0 0 0 chr5 73949063 73949101 -125681049 + (TG)n Simple_repeat Simple_repeat 1 38 0 797 184 102 62 chr5 73950254 73950520 -125679630 - L1MC5 LINE L1 -36 7925 7643 2740 3 0 0 chr5 73950520 73950833 -125679317 + AluYa5 SINE Alu 2 314 0 797 184 102 62 chr5 73950833 73950869 -125679281 - L1MC5 LINE L1 -318 7643 7610 231 366 46 8 chr5 73951046 73951177 -125678973 - MIR3 SINE MIR -7 201 66 606 228 50 42 chr5 73951292 73951492 -125678658 + MER33 DNA MER1_type 1 191 -106 204 237 237 10 chr5 73951558 73951655 -125678495 + L2 LINE L2 3134 3252 -20 1901 272 49 3 chr5 73951781 73952540 -125677610 + L2 LINE L2 2502 3306 -7 2140 112 10 7 chr5 73953083 73953387 -125676763 - AluSg SINE Alu -1 309 5 2021 135 0 16 chr5 73954242 73954545 -125675605 + AluSx SINE Alu 3 300 -12 213 235 20 0 chr5 73955181 73955232 -125674918 + MIR SINE MIR 103 154 -108 1035 246 53 117 chr5 73955235 73955410 -125674740 + MLT1I LTR MaLR 19 204 -205 877 156 0 15 chr5 73955410 73955545 -125674605 + FLAM_C SINE Alu 1 133 0 1035 246 53 117 chr5 73955545 73955787 -125674363 + MLT1I LTR MaLR 204 409 0 248 132 0 0 chr5 73955836 73955874 -125674276 + L2 LINE L2 3223 3260 -12 184 301 36 12 chr5 73956845 73956928 -125673222 - L2 LINE L2 -3 3269 3185 558 258 40 31 chr5 73956942 73957149 -125673001 - MER20B DNA MER1_type -6 213 1 429 255 189 37 chr5 73957772 73957995 -125672155 + MIR SINE MIR 7 258 -4 385 343 68 42 chr5 73958223 73958532 -125671618 + L3 LINE CR1 1041 1357 -220 183 42 0 0 chr5 73958777 73958801 -125671349 + (CAA)n Simple_repeat Simple_repeat 2 25 0 186 339 0 0 chr5 73959457 73959516 -125670634 - L2 LINE L2 -4 3309 3251 748 293 15 0 chr5 73959520 73959718 -125670432 - MIR SINE MIR -3 259 59 2002 129 0 57 chr5 73960051 73960368 -125669782 - AluSg SINE Alu -11 299 1 324 328 0 17 chr5 73960535 73960651 -125669499 + MIR SINE MIR 79 192 -70 21 0 0 0 chr5 73961155 73961176 -125668974 + AT_rich Low_complexity Low_complexity 1 21 0 380 291 137 11 chr5 73961596 73961778 -125668372 - MIR SINE MIR -57 205 1 233 302 226 0 chr5 73962014 73962120 -125668030 - MIR3 SINE MIR -21 187 58 314 289 25 8 chr5 73962281 73962402 -125667748 - L1MC4a LINE L1 -1875 5933 5811 3807 206 35 31 chr5 73962413 73963773 -125666377 - L1ME1 LINE L1 -5 6161 4805 1029 252 116 33 chr5 73963787 73964244 -125665906 - L1MC4a LINE L1 -2001 5807 5313 300 254 55 36 chr5 73964252 73964362 -125665788 - L1MC4a LINE L1 -891 5255 5144 270 291 20 26 chr5 73964497 73964648 -125665502 - L1P LINE L1 -1115 5031 4882 343 22 0 0 chr5 73965780 73965825 -125664325 - AluSc SINE Alu 0 299 255 187 224 303 0 chr5 73966686 73966762 -125663388 + MER5A DNA MER1_type 67 165 -24 559 224 158 18 chr5 73967040 73967205 -125662945 - MER5A DNA MER1_type 0 189 2 532 171 73 41 chr5 73968415 73968538 -125661612 - L2 LINE L2 0 3313 3187 2193 107 0 3 chr5 73969140 73969430 -125660720 + AluSx SINE Alu 3 291 -21 267 31 0 0 chr5 73969827 73969859 -125660291 + (CA)n Simple_repeat Simple_repeat 2 33 0 481 336 27 0 chr5 73969871 73970020 -125660130 - MIR3 SINE MIR -46 162 10 423 202 0 0 chr5 73970330 73970419 -125659731 + (CA)n Simple_repeat Simple_repeat 1 89 0 551 320 81 13 chr5 73971059 73971293 -125658857 - MIR SINE MIR 0 262 13 264 100 0 0 chr5 73973601 73973641 -125656509 + (TC)n Simple_repeat Simple_repeat 2 41 0 205 167 28 0 chr5 73973752 73973788 -125656362 + GA-rich Low_complexity Low_complexity 1 37 0 729 68 17 8 chr5 73974942 73975060 -125655090 + (TCTA)n Simple_repeat Simple_repeat 2 120 0 1380 246 91 31 chr5 73976595 73977047 -125653103 - L1ME3A LINE L1 -14 6156 5678 206 312 25 64 chr5 73977611 73977768 -125652382 + MIR SINE MIR 91 241 -21 * 638 268 70 58 chr5 73977723 73977966 -125652184 - MIR SINE MIR -10 252 7 343 320 43 54 chr5 73978258 73978546 -125651604 - L2 LINE L2 -183 3089 2641 3672 157 16 72 chr5 73978620 73979352 -125650798 - LTR8 LTR ERV1 0 691 1 4536 178 60 4 chr5 73979942 73980713 -125649437 - MER21B LTR ERV1 -49 814 1 2285 91 0 3 chr5 73980847 73981133 -125649017 - AluSx SINE Alu -11 301 17 640 203 8 24 chr5 73981133 73981256 -125648894 + MLT1F1 LTR MaLR 183 303 -264 24 32 0 0 chr5 73981455 73981486 -125648664 + AT_rich Low_complexity Low_complexity 1 31 0 1447 166 3 91 chr5 73982169 73982314 -125647836 + AluJo SINE Alu 1 106 -206 2302 75 7 7 chr5 73982314 73982607 -125647543 - AluY SINE Alu -18 293 1 1447 166 3 91 chr5 73982607 73982768 -125647382 + AluJo SINE Alu 106 280 -32 203 77 0 26 chr5 73982768 73982807 -125647343 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 2045 232 107 14 chr5 73982836 73983349 -125646801 + MLT1F1 LTR MaLR 7 567 0 339 259 89 9 chr5 73983934 73984046 -125646104 + L2 LINE L2 3193 3313 0 200 33 0 33 chr5 73984606 73984636 -125645514 + (GAAAA)n Simple_repeat Simple_repeat 1 29 0 2963 254 57 59 chr5 73985861 73987131 -125643019 - L1ME LINE L1 -4818 1262 27 634 275 124 65 chr5 73987246 73987674 -125642476 - MLT1H LTR MaLR -62 489 1 256 352 0 0 chr5 73987782 73987890 -125642260 - MIR SINE MIR -97 165 58 265 301 65 13 chr5 73987904 73988057 -125642093 - L2 LINE L2 -157 3156 2996 423 0 0 0 chr5 73988320 73988367 -125641783 + (TA)n Simple_repeat Simple_repeat 1 47 0 495 312 28 73 chr5 73988864 73989191 -125640959 + L1MEd LINE L1 599 910 -5295 530 307 25 44 chr5 73989205 73989570 -125640580 + L1MEd LINE L1 1255 1612 -4784 26 64 0 0 chr5 73989579 73989626 -125640524 + AT_rich Low_complexity Low_complexity 1 47 0 24 32 0 0 chr5 73989749 73989780 -125640370 + AT_rich Low_complexity Low_complexity 1 31 0 240 280 52 33 chr5 73989922 73990166 -125639984 + L1MEd LINE L1 2016 2232 -3983 296 331 123 15 chr5 73990229 73990359 -125639791 + MIR3 SINE MIR 20 163 -45 944 276 86 61 chr5 73990680 73991224 -125638926 + Charlie7 DNA MER1_type 78 635 -1977 467 195 132 23 chr5 73991277 73991451 -125638699 + Charlie7 DNA MER1_type 2415 2607 -5 221 254 100 55 chr5 73991551 73991661 -125638489 + MIR3 SINE MIR 7 121 -87 183 237 175 44 chr5 73991783 73991897 -125638253 - MIR SINE MIR -15 247 119 1630 267 73 66 chr5 73991898 73992486 -125637664 + MLT1E LTR MaLR 2 593 0 1884 164 14 0 chr5 73992494 73992787 -125637363 + AluJb SINE Alu 7 303 -9 1923 150 40 0 chr5 73992817 73993117 -125637033 - AluSx SINE Alu 0 312 1 446 256 77 109 chr5 73993416 73993791 -125636359 - L1MEd LINE L1 -1097 1393 967 189 331 28 70 chr5 73994631 73994773 -125635377 - MIR3 SINE MIR -64 144 9 302 231 74 41 chr5 73995014 73995135 -125635015 + MLT1L LTR MaLR 110 234 -381 396 292 84 6 chr5 73995267 73995445 -125634705 + MLT1L LTR MaLR 423 614 -1 1286 167 93 58 chr5 73995492 73995803 -125634347 - MER33 DNA MER1_type 0 324 3 1979 171 112 3 chr5 73997016 73997373 -125632777 - MSTD LTR MaLR 0 396 1 892 227 6 0 chr5 73997381 73997553 -125632597 + MER5B DNA MER1_type 1 173 -5 227 343 0 39 chr5 73997646 73997748 -125632402 + MLT1L LTR MaLR 8 105 -510 396 125 0 0 chr5 73998044 73998108 -125632042 + (TC)n Simple_repeat Simple_repeat 2 65 0 2498 47 3 31 chr5 73998492 73998809 -125631341 + AluY SINE Alu 1 308 -3 1538 260 117 66 chr5 73998949 73999269 -125630881 + L1ME LINE L1 6 308 -5762 2023 136 0 26 chr5 73999269 73999577 -125630573 + AluSx SINE Alu 4 303 -9 1538 260 117 66 chr5 73999577 73999783 -125630367 + L1ME LINE L1 308 502 -5568 336 109 250 0 chr5 73999783 73999847 -125630303 - MADE1 DNA Mariner 0 80 1 1538 260 117 66 chr5 73999847 74000072 -125630078 + L1ME LINE L1 502 796 -5274 410 250 67 0 chr5 74000571 74000675 -125629475 + MER103 DNA DNA 11 121 -45 739 329 104 24 chr5 74000767 74001181 -125628969 - L2 LINE L2 0 3313 2867 1295 239 24 9 chr5 74001312 74001646 -125628504 + L1ME2 LINE L1 5536 5874 -290 * 3698 211 61 37 chr5 74001624 74002643 -125627507 + L1ME LINE L1 4140 5198 -902 3530 80 7 20 chr5 74002643 74003091 -125627059 + MLT2A1 LTR ERVL 1 442 -2 3698 211 61 37 chr5 74003091 74003377 -125626773 + L1ME LINE L1 5198 5476 -624 398 306 16 0 chr5 74003532 74003653 -125626497 - MIR SINE MIR -38 224 102 276 325 81 38 chr5 74003858 74004018 -125626132 + MIR SINE MIR 46 212 -50 200 260 158 55 chr5 74004185 74004312 -125625838 - L2 LINE L2 -10 3303 3164 875 263 104 22 chr5 74005318 74005588 -125624562 - LTR16C LTR ERVL 0 491 200 327 246 82 41 chr5 74006353 74006475 -125623675 + MIR SINE MIR 111 237 -25 183 244 24 0 chr5 74006444 74006485 -125623665 + L2 LINE L2 3218 3259 -13 * 2802 7 0 0 chr5 74006485 74006784 -125623366 + AluY SINE Alu 1 299 -12 16757 167 13 22 chr5 74008676 74010519 -125619631 - L1MA4 LINE L1 -8 7711 5854 4170 39 6 16 chr5 74010519 74011007 -125619143 - L1PA5 LINE L1 -3 6151 5669 16757 167 13 22 chr5 74011007 74011108 -125619042 - L1MA4 LINE L1 -1865 5854 5754 2106 121 0 19 chr5 74011108 74011415 -125618735 - AluY SINE Alu -10 301 1 16757 167 13 22 chr5 74011415 74013897 -125616253 - L1MA4 LINE L1 -1965 5754 3317 1158 203 10 0 chr5 74013950 74014152 -125615998 - AluJo SINE Alu -108 204 1 2748 218 41 22 chr5 74014152 74014909 -125615241 - L1MA4 LINE L1 -4342 3223 2453 682 235 54 32 chr5 74014881 74015102 -125615048 - L1ME3A LINE L1 -263 7326 7101 * 342 252 77 28 chr5 74015498 74015641 -125614509 - Charlie2a DNA MER1_type 0 2862 2713 * 654 187 38 57 chr5 74015630 74015839 -125614311 - Charlie2a DNA MER1_type -1192 1670 1466 201 108 0 0 chr5 74015882 74015919 -125614231 + (GCTG)n Simple_repeat Simple_repeat 4 40 0 493 219 50 17 chr5 74015919 74016038 -125614112 - Charlie2b DNA MER1_type -2101 681 559 343 238 63 48 chr5 74016047 74016173 -125613977 - Charlie2b DNA MER1_type -2562 300 173 231 114 0 0 chr5 74016726 74016761 -125613389 + (GAAAA)n Simple_repeat Simple_repeat 4 38 0 2423 51 7 10 chr5 74018023 74018317 -125611833 - AluY SINE Alu -8 303 11 234 0 0 0 chr5 74019275 74019301 -125610849 + (T)n Simple_repeat Simple_repeat 1 26 0 1872 74 0 0 chr5 74020599 74020828 -125609322 - AluY SINE Alu -3 308 80 375 219 81 46 chr5 74021306 74021442 -125608708 + MIR SINE MIR 7 161 -47 452 160 168 56 chr5 74021739 74021864 -125608286 - L2 LINE L2 0 3313 3175 214 306 16 0 chr5 74021868 74021930 -125608220 + MIR SINE MIR 197 259 -3 485 254 194 36 chr5 74022394 74022642 -125607508 + L2 LINE L2 3027 3313 0 311 196 333 0 chr5 74023839 74023941 -125606209 + MIR3 SINE MIR 57 192 -16 418 339 36 6 chr5 74024480 74024648 -125605502 + MIR SINE MIR 20 192 -70 583 315 54 14 chr5 74024656 74024932 -125605218 - LTR67 LTR ERVL 0 557 271 324 273 164 8 chr5 74025424 74025552 -125604598 - MER5B DNA MER1_type 0 178 31 1373 197 46 43 chr5 74025842 74026147 -125604003 + AluJo SINE Alu 1 306 -6 707 256 184 60 chr5 74026687 74027115 -125603035 + LTR67 LTR ERVL 7 495 -62 1865 124 60 37 chr5 74027115 74027414 -125602736 - AluSq SINE Alu -7 306 1 707 256 184 60 chr5 74027414 74027435 -125602715 + LTR67 LTR ERVL 495 512 -45 1318 275 66 31 chr5 74027435 74028125 -125602025 + L2 LINE L2 2608 3313 0 653 245 92 0 chr5 74028482 74028645 -125601505 - MIR SINE MIR -11 251 74 475 316 51 36 chr5 74028729 74028982 -125601168 + MIR SINE MIR 5 261 -1 216 135 0 0 chr5 74028985 74029022 -125601128 + (TTA)n Simple_repeat Simple_repeat 2 38 0 251 234 0 0 chr5 74029117 74029164 -125600986 - MER5B DNA MER1_type -45 133 87 504 269 38 6 chr5 74029346 74029506 -125600644 + MIR SINE MIR 84 248 -14 2827 129 31 12 chr5 74030027 74030444 -125599706 - MSTA LTR MaLR 0 428 4 211 270 52 101 chr5 74030468 74030596 -125599554 + L2 LINE L2 3073 3185 -128 371 21 21 0 chr5 74030596 74030644 -125599506 + (CA)n Simple_repeat Simple_repeat 2 50 0 211 270 52 101 chr5 74030644 74030763 -125599387 + L2 LINE L2 3185 3308 -5 283 316 188 0 chr5 74031270 74031403 -125598747 - MIR3 SINE MIR -16 192 35 205 132 0 53 chr5 74032793 74032811 -125597339 + (GAAAA)n Simple_repeat Simple_repeat 5 22 -18 2240 116 3 3 chr5 74032811 74033122 -125597028 + AluSq SINE Alu 1 311 -2 205 132 0 53 chr5 74033122 74033141 -125597009 + (GAAAA)n Simple_repeat Simple_repeat 22 40 0 440 218 50 10 chr5 74034093 74034194 -125595956 - MIR SINE MIR -59 203 99 836 273 190 20 chr5 74034223 74034670 -125595480 + LTR33A LTR ERVL 1 523 0 224 333 12 24 chr5 74034670 74034754 -125595396 - MIR SINE MIR -178 84 2 30 27 0 0 chr5 74035184 74035221 -125594929 + AT_rich Low_complexity Low_complexity 1 37 0 192 338 75 0 chr5 74036303 74036383 -125593767 + L2 LINE L2 2985 3070 -202 540 214 0 0 chr5 74036576 74036679 -125593471 + MER103 DNA DNA 12 114 -52 200 167 42 0 chr5 74036978 74037026 -125593124 + GA-rich Low_complexity Low_complexity 4 53 0 39 60 0 0 chr5 74037336 74037403 -125592747 + AT_rich Low_complexity Low_complexity 1 67 0 201 319 0 0 chr5 74038520 74038567 -125591583 + (CATG)n Simple_repeat Simple_repeat 3 49 0 276 30 0 0 chr5 74039117 74039150 -125591000 + (TC)n Simple_repeat Simple_repeat 2 34 0 2281 147 28 38 chr5 74039373 74039935 -125590215 + MLT2A2 LTR ERVL 1 554 0 911 266 50 73 chr5 74041480 74042120 -125588030 + L2 LINE L2 2566 3304 -9 403 279 80 80 chr5 74042411 74042612 -125587538 - L2 LINE L2 -452 2862 2662 363 44 0 0 chr5 74042642 74042687 -125587463 + (GGAA)n Simple_repeat Simple_repeat 2 46 0 851 165 108 52 chr5 74042687 74042881 -125587269 - MLT2C2 LTR ERVL -13 451 247 280 264 11 44 chr5 74042890 74042981 -125587169 + L2 LINE L2 1814 1901 -1413 198 137 59 39 chr5 74042978 74043029 -125587121 + L2 LINE L2 2194 2245 -1069 * 1180 142 18 142 chr5 74043047 74043322 -125586828 - MLT2D LTR ERVL -173 241 1 1234 258 48 7 chr5 74043322 74043617 -125586533 - L2 LINE L2 -655 2659 2353 44834 40 3 1 chr5 74043620 74049761 -125580389 + L1PA4 LINE L1 1 6155 0 543 333 40 0 chr5 74049763 74049940 -125580210 - L2 LINE L2 -939 2375 2192 318 281 21 10 chr5 74049940 74050036 -125580114 - L2 LINE L2 -1418 1896 1800 388 253 20 10 chr5 74050071 74050170 -125579980 - MIR SINE MIR -66 142 43 545 233 68 68 chr5 74051161 74051337 -125578813 - MIR3 SINE MIR -2 206 31 271 308 117 0 chr5 74052499 74052619 -125577531 - L2 LINE L2 -1 3312 3179 265 348 52 13 chr5 74052689 74052811 -125577339 + L2 LINE L2 3153 3284 -29 1815 162 59 142 chr5 74052811 74053402 -125576748 + MLT1F LTR MaLR 1 542 0 265 348 52 13 chr5 74053402 74053434 -125576716 + L2 LINE L2 3284 3313 0 313 248 11 14 chr5 74054489 74054605 -125575545 - MLT1L LTR MaLR -299 273 98 22 80 0 0 chr5 74055348 74055398 -125574752 + AT_rich Low_complexity Low_complexity 1 50 0 230 0 33 0 chr5 74055508 74055538 -125574612 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 183 336 143 8 chr5 74055688 74055807 -125574343 + L2 LINE L2 3138 3272 0 215 273 18 91 chr5 74056125 74056235 -125573915 + MIR SINE MIR 111 212 -50 261 320 40 0 chr5 74056571 74056646 -125573504 - MIR3 SINE MIR -120 88 11 2323 135 42 0 chr5 74057402 74057736 -125572414 + MER7A DNA MER2_type 1 346 0 181 354 15 0 chr5 74057908 74057973 -125572177 + L2 LINE L2 3246 3311 -2 413 344 101 38 chr5 74058137 74058614 -125571536 - L2 LINE L2 -650 2664 2158 291 220 70 40 chr5 74059399 74059499 -125570651 - MIR SINE MIR 0 262 160 547 257 70 21 chr5 74059513 74059700 -125570450 - MIR SINE MIR -59 203 8 282 289 11 11 chr5 74059709 74059799 -125570351 - MIR SINE MIR -120 142 53 1978 124 8 0 chr5 74059882 74060173 -125569977 + AluSg1 SINE Alu 14 306 0 351 222 71 40 chr5 74060552 74060651 -125569499 - L2 LINE L2 0 3272 3171 933 284 144 21 chr5 74060652 74061074 -125569076 + LTR16C LTR ERVL 6 479 -12 848 159 50 16 chr5 74062843 74063025 -125567125 + MER53 DNA DNA 1 188 -1 196 237 68 0 chr5 74064386 74064445 -125565705 - MIR SINE MIR -80 182 120 2557 96 50 19 chr5 74064502 74064866 -125565284 - THE1C LTR MaLR 0 375 1 2977 122 49 55 chr5 74064921 74065414 -125564736 - LTR2B LTR ERV1 0 490 1 288 229 48 24 chr5 74067470 74067552 -125562598 - LTR33A LTR ERVL -5 518 435 334 194 56 0 chr5 74067552 74067624 -125562526 - LTR16C LTR ERVL 0 491 416 350 233 12 23 chr5 74067627 74067713 -125562437 - MER63 DNA MER1_type -971 90 6 185 291 18 18 chr5 74067914 74067969 -125562181 - L3 LINE CR1 -5 1572 1518 3055 168 47 36 chr5 74067972 74068614 -125561536 - L1MB5 LINE L1 0 6174 5526 392 246 153 0 chr5 74068620 74068738 -125561412 - MIR3 SINE MIR -62 146 11 224 327 107 96 chr5 74069444 74069716 -125560434 - L2 LINE L2 -5 3267 2993 2267 158 89 20 chr5 74070445 74070894 -125559256 - MLT1D LTR MaLR -1 504 25 2126 115 0 0 chr5 74071220 74071508 -125558642 - AluSx SINE Alu -2 310 23 222 149 0 75 chr5 74071519 74071586 -125558564 + (TTCTC)n Simple_repeat Simple_repeat 4 65 0 432 273 39 129 chr5 74071586 74071897 -125558253 - L2 LINE L2 -9 3263 2981 393 22 0 0 chr5 74072861 74072907 -125557243 + (GA)n Simple_repeat Simple_repeat 1 46 0 281 364 0 0 chr5 74073219 74073318 -125556832 - MIR SINE MIR -161 101 3 2233 83 0 13 chr5 74073488 74073612 -125556538 + AluY SINE Alu 1 125 -186 189 0 0 0 chr5 74073612 74073633 -125556517 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 2233 83 0 13 chr5 74073633 74073809 -125556341 + AluY SINE Alu 125 297 -14 748 243 120 33 chr5 74074137 74074375 -125555775 - MIR SINE MIR -2 260 4 214 302 0 16 chr5 74074461 74074524 -125555626 - MIR SINE MIR -124 84 23 1306 97 0 0 chr5 74076095 74076270 -125553880 - AluSp SINE Alu -3 310 136 908 81 8 32 chr5 74076270 74076394 -125553756 + AluSp SINE Alu 18 138 -175 190 238 168 59 chr5 74076900 74077001 -125553149 + MIR SINE MIR 26 137 -125 255 301 36 0 chr5 74077067 74077150 -125553000 + L2 LINE L2 3187 3272 0 514 286 42 42 chr5 74077232 74077445 -125552705 - MIR SINE MIR -43 219 7 309 286 66 0 chr5 74078932 74079023 -125551127 - MIR SINE MIR -15 247 151 21 57 0 0 chr5 74079319 74079354 -125550796 + AT_rich Low_complexity Low_complexity 1 35 0 331 241 9 65 chr5 74079446 74079554 -125550596 - MER113 DNA MER1_type? -415 106 5 2031 192 9 68 chr5 74079809 74080355 -125549795 - MLT2B2 LTR ERVL -38 515 1 251 307 159 6 chr5 74080808 74080971 -125549179 - L3b LINE CR1 -75 1508 1321 334 272 0 61 chr5 74082250 74082364 -125547786 - MIR SINE MIR -80 182 76 353 284 55 70 chr5 74082545 74082746 -125547404 - MIR SINE MIR -42 220 23 581 141 0 0 chr5 74083426 74083518 -125546632 - AluSp/q SINE Alu -4 309 218 475 334 173 6 chr5 74083749 74084072 -125546078 + L2 LINE L2 2905 3281 -32 6869 189 174 24 chr5 74084072 74085597 -125544553 + MER52A LTR ERV1 1 1755 0 2819 249 31 9 chr5 74086026 74086704 -125543446 + L1ME1 LINE L1 36 728 -5668 2524 256 42 14 chr5 74086718 74088138 -125542012 + L1ME1 LINE L1 840 3769 -2446 1429 212 49 45 chr5 74088143 74088662 -125541488 + MER76 LTR ERV 4 592 -96 1669 104 36 0 chr5 74088662 74088883 -125541267 + MER30 DNA MER1_type 2 230 0 1429 212 49 45 chr5 74088883 74088981 -125541169 + MER76 LTR ERV 592 688 0 4501 213 72 18 chr5 74088986 74090229 -125539921 + L1ME1 LINE L1 3799 5109 -1106 2149 197 41 19 chr5 74090230 74090702 -125539448 - LTR45B LTR ERV1 0 619 11 428 117 13 0 chr5 74090747 74090824 -125539326 + (TTCCC)n Simple_repeat Simple_repeat 1 78 0 1885 163 3 3 chr5 74090824 74091113 -125539037 - AluSx SINE Alu -22 290 2 3381 230 11 35 chr5 74091117 74091222 -125538928 + L1ME1 LINE L1 5146 5252 -983 11378 39 7 4 chr5 74091222 74093297 -125536853 + L1PA5 LINE L1 4071 6154 0 3381 230 11 35 chr5 74093297 74094304 -125535846 + L1ME1 LINE L1 5252 6228 -7 2063 148 3 0 chr5 74095843 74096148 -125534002 - AluJb SINE Alu -6 306 1 425 287 85 77 chr5 74096207 74096606 -125533544 + MLT1H LTR MaLR 13 536 -13 1132 147 16 31 chr5 74097076 74097267 -125532883 + MER20 DNA MER1_type 1 188 -31 345 272 80 43 chr5 74097827 74097989 -125532161 - L1M4 LINE L1 -935 5211 5044 1172 161 29 10 chr5 74098059 74098264 -125531886 - L1PA16 LINE L1 0 6166 5958 427 288 38 8 chr5 74098507 74098639 -125531511 + MER117 DNA MER1_type 1 136 -61 599 304 65 16 chr5 74098738 74098985 -125531165 + MIR SINE MIR 4 262 0 635 193 161 19 chr5 74099920 74100081 -125530069 + MER5A DNA MER1_type 6 189 0 216 67 0 0 chr5 74101079 74101109 -125529041 + (TG)n Simple_repeat Simple_repeat 2 31 0 314 267 152 38 chr5 74102405 74102510 -125527640 + MER5A DNA MER1_type 1 117 -72 411 253 62 18 chr5 74102533 74102671 -125527479 - MIR SINE MIR -65 143 5 283 267 58 25 chr5 74102881 74103001 -125527149 + L1MC4 LINE L1 7919 8042 0 277 277 84 8 chr5 74103017 74103136 -125527014 + MLT1J LTR MaLR 210 337 -174 619 273 148 0 chr5 74103238 74103454 -125526696 + MIR SINE MIR 15 262 0 318 239 257 9 chr5 74103821 74103934 -125526216 + MIR3 SINE MIR 16 156 -52 300 53 0 0 chr5 74104154 74104192 -125525958 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 381 266 35 65 chr5 74104203 74104372 -125525778 - L2 LINE L2 -36 3277 3114 370 143 0 0 chr5 74104633 74104689 -125525461 - L1MC5 LINE L1 -186 7775 7720 247 237 3 15 chr5 74104893 74104971 -125525179 - MIR SINE MIR -63 145 84 599 265 28 28 chr5 74106812 74106993 -125523157 - MIR3 SINE MIR -20 188 8 318 300 81 7 chr5 74107032 74107198 -125522952 - MIR SINE MIR -77 185 6 311 179 15 45 chr5 74107385 74107452 -125522698 - L1ME LINE L1 -454 5667 5603 1408 192 85 61 chr5 74107469 74107844 -125522306 - MLT1B LTR MaLR 0 390 7 26 82 0 0 chr5 74108179 74108240 -125521910 + AT_rich Low_complexity Low_complexity 1 61 0 2400 78 0 25 chr5 74108260 74108579 -125521571 - AluSp SINE Alu -2 311 1 234 341 15 30 chr5 74109197 74109332 -125520818 + LTR16C LTR ERVL 358 490 -1 332 291 102 0 chr5 74109356 74109483 -125520667 + MER117 DNA MER1_type 7 146 -51 974 103 0 48 chr5 74109568 74109733 -125520417 - MER44D DNA MER2_type -69 540 384 877 220 21 5 chr5 74109736 74109927 -125520223 - L1M2 LINE L1 -6654 195 2 374 149 0 45 chr5 74109931 74109998 -125520152 + L1MC2 LINE L1 6019 6082 -262 549 144 165 0 chr5 74110007 74110104 -125520046 - MER44D DNA MER2_type -226 383 1 359 271 104 64 chr5 74110114 74110566 -125519584 - L1MDa LINE L1 -4481 1648 1168 1863 132 83 3 chr5 74110566 74110855 -125519295 - AluSx SINE Alu 0 312 1 359 271 104 64 chr5 74110855 74111093 -125519057 - L1MDa LINE L1 -4961 1168 941 1452 191 33 0 chr5 74111118 74111421 -125518729 - L1MC1 LINE L1 -6 6327 6015 3291 284 20 83 chr5 74111424 74112787 -125517363 + L1MA4A LINE L1 1 1277 -5572 14866 180 29 15 chr5 74112789 74113839 -125516311 + L1MA4A LINE L1 2871 3905 -3100 2269 104 3 0 chr5 74113839 74114137 -125516013 + AluY SINE Alu 8 306 -5 14866 180 29 15 chr5 74114137 74116266 -125513884 + L1MA4A LINE L1 3905 6003 -1002 2189 121 3 0 chr5 74116266 74116564 -125513586 + AluSx SINE Alu 6 304 -8 14866 180 29 15 chr5 74116564 74116636 -125513514 + L1MA4A LINE L1 6003 6073 -932 2344 100 0 10 chr5 74116636 74116946 -125513204 + AluY SINE Alu 1 307 -4 14866 180 29 15 chr5 74116946 74117247 -125512903 + L1MA4A LINE L1 6073 6368 -637 9371 103 9 0 chr5 74117247 74119370 -125510780 + L1PA8 LINE L1 4033 6166 -6 14866 180 29 15 chr5 74119370 74119705 -125510445 + L1MA4A LINE L1 6368 6812 -193 210 346 13 0 chr5 74120128 74120206 -125509944 + CT-rich Low_complexity Low_complexity 1 79 0 333 293 187 0 chr5 74120209 74120332 -125509818 - L2 LINE L2 -12 3260 3115 1428 150 8 0 chr5 74121058 74121305 -125508845 - L1MA8 LINE L1 -2 6289 6041 645 157 0 0 chr5 74123537 74123652 -125506498 + CT-rich Low_complexity Low_complexity 1 115 0 1959 137 11 3 chr5 74123652 74123936 -125506214 - AluJb SINE Alu -26 286 1 1323 104 0 0 chr5 74124024 74124207 -125505943 - L1P3 LINE L1 -6278 183 1 2443 8 0 0 chr5 74124395 74124653 -125505497 - AluYb8 SINE Alu -8 310 53 2126 196 28 28 chr5 74125293 74125753 -125504397 - LTR40b LTR ERVL 0 462 3 603 130 0 0 chr5 74125942 74126042 -125504108 + (CA)n Simple_repeat Simple_repeat 2 101 0 2625 164 39 37 chr5 74126812 74127354 -125502796 - MER67A LTR ERV1 0 543 1 256 273 214 27 chr5 74127356 74127543 -125502607 + MIR SINE MIR 41 262 0 2203 131 0 0 chr5 74127676 74127982 -125502168 - AluSx SINE Alu -6 306 1 241 178 0 0 chr5 74128610 74128655 -125501495 + MIR SINE MIR 47 91 -171 2596 53 3 28 chr5 74129039 74129358 -125500792 - AluY SINE Alu 0 311 1 409 302 88 10 chr5 74130134 74130339 -125499811 + MIR SINE MIR 34 254 -8 483 271 68 17 chr5 74130448 74130648 -125499502 + MIR SINE MIR 3 212 -50 496 224 9 9 chr5 74130885 74130992 -125499158 + MER81 DNA DNA 8 114 0 401 276 46 26 chr5 74131328 74131480 -125498670 + MIR3 SINE MIR 25 179 -29 211 206 147 0 chr5 74131548 74131616 -125498534 + MIR SINE MIR 82 159 -103 407 229 0 0 chr5 74131731 74131814 -125498336 - L2 LINE L2 -1 3312 3230 229 273 42 122 chr5 74131925 74132211 -125497939 + MLT1J LTR MaLR 36 298 -213 * 279 283 242 20 chr5 74132188 74132386 -125497764 + MLT1L LTR MaLR 356 597 -18 795 274 14 0 chr5 74132885 74133104 -125497046 - MIR SINE MIR 0 262 41 223 259 49 12 chr5 74133503 74133584 -125496566 - MIR SINE MIR -88 174 91 * 469 256 8 8 chr5 74133581 74133706 -125496444 - MER5B DNA MER1_type -51 127 3 343 185 31 0 chr5 74133956 74134021 -125496129 - LTR16A LTR ERVL -6 444 378 272 283 108 30 chr5 74134140 74134306 -125495844 - LTR16A LTR ERVL -254 196 18 872 142 77 26 chr5 74134675 74134830 -125495320 - LTR40c LTR ERVL -289 176 14 193 163 23 0 chr5 74134830 74134873 -125495277 - L2 LINE L2 -294 2978 2935 366 219 35 53 chr5 74134995 74135109 -125495041 + MER103 DNA DNA 54 165 -1 955 225 101 4 chr5 74135963 74136309 -125493841 + LTR16C LTR ERVL 75 490 -1 870 139 0 0 chr5 74136324 74136489 -125493661 + (TCCA)n Simple_repeat Simple_repeat 2 166 0 240 260 0 0 chr5 74136715 74136765 -125493385 + L2 LINE L2 3261 3310 -3 319 333 91 5 chr5 74137437 74137635 -125492515 - MIR SINE MIR 0 262 48 213 178 0 0 chr5 74137726 74137771 -125492379 + A-rich Low_complexity Low_complexity 1 45 0 2817 149 56 10 chr5 74138201 74138705 -125491445 - L1MB2 LINE L1 -2 6169 5643 406 243 48 0 chr5 74139844 74139947 -125490203 - MIR3 SINE MIR -19 189 82 234 263 101 10 chr5 74140368 74140467 -125489683 - MIR SINE MIR -44 218 111 181 194 0 0 chr5 74140948 74140984 -125489166 - MIR3 SINE MIR -22 186 151 246 111 0 0 chr5 74141033 74141069 -125489081 + LTR16A1 LTR ERVL 3 38 -419 542 279 67 10 chr5 74141152 74141360 -125488790 + LTR16C LTR ERVL 272 491 0 369 188 71 12 chr5 74141529 74141614 -125488536 - MLT1K LTR MaLR -8 580 491 393 285 51 0 chr5 74141630 74141767 -125488383 - MER91B DNA MER1_type -2 188 45 972 293 18 69 chr5 74141819 74142266 -125487884 - MLT1K LTR MaLR -160 428 5 453 263 122 6 chr5 74142278 74142434 -125487716 - MER5A DNA MER1_type -2 187 14 883 150 6 0 chr5 74143081 74143241 -125486909 - MER33 DNA MER1_type -11 313 153 1963 110 3 3 chr5 74143249 74143531 -125486619 + L1PA8A LINE L1 5845 6126 -5 645 255 12 0 chr5 74143701 74143862 -125486288 - MER33 DNA MER1_type -153 171 9 435 275 39 33 chr5 74144726 74144908 -125485242 + MIR SINE MIR 48 230 -32 311 233 222 30 chr5 74145327 74145593 -125484557 + L1ME4a LINE L1 5803 6119 -2 630 240 123 0 chr5 74146543 74146722 -125483428 + MIR SINE MIR 60 260 -2 22 0 0 0 chr5 74146727 74146749 -125483401 + AT_rich Low_complexity Low_complexity 1 22 0 467 239 140 14 chr5 74146762 74146984 -125483166 + MIR SINE MIR 13 262 0 442 302 10 36 chr5 74148369 74148561 -125481589 - MER5A DNA MER1_type -1 188 2 559 237 11 45 chr5 74148843 74149020 -125481130 - MER5B DNA MER1_type 0 178 8 939 10 0 0 chr5 74149341 74149445 -125480705 + L1PA5 LINE L1 6045 6148 -6 227 271 90 39 chr5 74149599 74149754 -125480396 - MER117 DNA MER1_type -34 163 1 413 250 134 67 chr5 74149754 74149978 -125480172 + MIR SINE MIR 9 247 -15 282 307 127 54 chr5 74150377 74150543 -125479607 - MIR SINE MIR -70 192 15 2045 153 56 26 chr5 74152207 74152580 -125477570 + MER57A LTR ERV1 1 388 -15 2325 126 0 0 chr5 74152580 74152890 -125477260 - AluSg SINE Alu 0 310 1 2045 153 56 26 chr5 74152890 74152907 -125477243 + MER57A LTR ERV1 388 403 0 29 70 0 0 chr5 74153183 74153240 -125476910 + AT_rich Low_complexity Low_complexity 1 57 0 2206 85 31 10 chr5 74153902 74154195 -125475955 + AluSq SINE Alu 1 299 -14 776 228 39 89 chr5 74154269 74154528 -125475622 + MLT1J LTR MaLR 232 477 -34 2246 127 0 26 chr5 74154617 74154963 -125475187 + MER1B DNA MER1_type 1 337 0 240 225 56 113 chr5 74155660 74155802 -125474348 - L2 LINE L2 -17 3296 3163 475 179 19 0 chr5 74156382 74156488 -125473662 + CT-rich Low_complexity Low_complexity 1 108 0 208 283 19 0 chr5 74156488 74156541 -125473609 + C-rich Low_complexity Low_complexity 3 56 0 7914 39 13 0 chr5 74156601 74157901 -125472249 - L1PA4 LINE L1 -4 6151 4845 362 198 79 124 chr5 74157906 74158083 -125472067 - MIR SINE MIR -65 197 29 24 0 0 0 chr5 74158427 74158451 -125471699 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr5 74158451 74158471 -125471679 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 717 294 137 20 chr5 74158555 74159015 -125471135 + LTR33 LTR ERVL 7 520 -1 477 233 58 17 chr5 74159450 74159570 -125470580 - MIR3 SINE MIR -53 155 31 392 314 70 16 chr5 74160505 74160690 -125469460 + MIR3 SINE MIR 4 198 -10 280 361 8 16 chr5 74160757 74160879 -125469271 - MIR SINE MIR -64 144 24 1209 233 96 42 chr5 74161435 74161843 -125468307 + LTR16A LTR ERVL 21 450 0 369 0 0 0 chr5 74163909 74163950 -125466200 + (TG)n Simple_repeat Simple_repeat 1 41 0 196 382 0 29 chr5 74164107 74164209 -125465941 + MIR SINE MIR 30 128 -80 6796 79 1 0 chr5 74165357 74167113 -125463037 - L1PA13 LINE L1 -3 6160 4413 1546 74 11 0 chr5 74167712 74167902 -125462248 - AluSg/x SINE Alu -16 294 103 939 337 51 10 chr5 74170975 74171385 -125458765 - L3 LINE CR1 -272 1305 879 386 307 43 12 chr5 74171407 74171570 -125458580 - MIR SINE MIR -4 258 91 578 385 83 39 chr5 74171724 74172410 -125457740 - L3 LINE CR1 -793 784 69 2799 0 0 0 chr5 74172675 74172969 -125457181 + AluYa8 SINE Alu 10 303 -7 1599 149 23 50 chr5 74175487 74175789 -125454361 + AluJo SINE Alu 5 298 -14 2991 217 126 16 chr5 74176306 74177790 -125452360 - L1ME2 LINE L1 -2 6162 4511 306 0 0 0 chr5 74177790 74177824 -125452326 + (CA)n Simple_repeat Simple_repeat 2 35 0 405 195 10 128 chr5 74177838 74177966 -125452184 - L1ME2 LINE L1 -1833 4313 4214 2098 138 0 13 chr5 74177966 74178278 -125451872 + AluJb SINE Alu 2 309 -3 405 195 10 128 chr5 74178278 74178344 -125451806 - L1ME2 LINE L1 -1932 4214 4142 491 302 60 11 chr5 74178607 74178789 -125451361 - MIR SINE MIR -62 200 10 6545 125 18 21 chr5 74178899 74179049 -125451101 + L1MA8 LINE L1 5023 5172 -1119 1997 125 7 7 chr5 74179049 74179344 -125450806 + AluY SINE Alu 17 311 0 6545 125 18 21 chr5 74179344 74180472 -125449678 + L1MA8 LINE L1 5172 6287 -4 268 200 20 0 chr5 74180621 74180671 -125449479 + L2 LINE L2 3261 3311 -2 475 296 158 12 chr5 74182743 74182990 -125447160 + L1MC/D LINE L1 5377 5659 -2149 337 200 0 13 chr5 74183002 74183077 -125447073 + MER116 DNA Mariner 7 80 0 288 302 10 0 chr5 74183077 74183173 -125446977 + L1MC/D LINE L1 5686 5782 -2026 2298 72 3 14 chr5 74183385 74183676 -125446474 - AluSc SINE Alu -21 288 1 335 211 13 0 chr5 74184242 74184318 -125445832 - L1ME2 LINE L1 -9 6155 6079 481 227 109 0 chr5 74184320 74184430 -125445720 + MER63 DNA MER1_type 5 752 -310 865 238 43 30 chr5 74184508 74184743 -125445407 - L1ME2 LINE L1 -88 6076 5839 315 71 0 0 chr5 74185055 74185097 -125445053 + (TG)n Simple_repeat Simple_repeat 2 43 0 1958 79 12 0 chr5 74185477 74185731 -125444419 - L1PB2 LINE L1 -2 6149 5893 783 273 38 74 chr5 74186228 74186557 -125443593 + LTR16B LTR ERVL 87 401 -63 2548 83 0 0 chr5 74186557 74186869 -125443281 - AluSx SINE Alu 0 312 1 783 273 38 74 chr5 74186869 74186931 -125443219 + LTR16B LTR ERVL 401 464 0 213 359 39 0 chr5 74186934 74187037 -125443113 + L3 LINE CR1 1453 1559 -18 189 0 0 0 chr5 74187109 74187130 -125443020 + (CAG)n Simple_repeat Simple_repeat 1 21 0 2382 90 3 0 chr5 74188024 74188323 -125441827 - AluSp SINE Alu -8 305 6 325 171 43 14 chr5 74189553 74189623 -125440527 + MER5A DNA MER1_type 41 112 -77 454 319 93 60 chr5 74190014 74190551 -125439599 + L2 LINE L2 2713 3267 -5 392 246 153 0 chr5 74191257 74191375 -125438775 + MIR3 SINE MIR 11 146 -62 3055 168 47 36 chr5 74191381 74192023 -125438127 + L1MB5 LINE L1 5526 6174 0 185 291 18 18 chr5 74192026 74192081 -125438069 + L3 LINE CR1 1518 1572 -5 350 233 12 23 chr5 74192282 74192368 -125437782 + MER63 DNA MER1_type 6 90 -971 334 194 56 0 chr5 74192371 74192443 -125437707 + LTR16C LTR ERVL 416 491 0 288 229 48 24 chr5 74192443 74192525 -125437625 + LTR33A LTR ERVL 435 518 -5 2977 122 49 55 chr5 74194584 74195077 -125435073 + LTR2B LTR ERV1 1 490 0 2557 96 50 19 chr5 74195132 74195496 -125434654 + THE1C LTR MaLR 1 375 0 196 237 68 0 chr5 74195553 74195612 -125434538 + MIR SINE MIR 120 182 -80 848 159 50 16 chr5 74196974 74197156 -125432994 - MER53 DNA DNA -1 188 1 906 287 144 21 chr5 74198925 74199347 -125430803 - LTR16C LTR ERVL -12 479 6 351 222 71 40 chr5 74199348 74199447 -125430703 + L2 LINE L2 3171 3272 0 608 298 55 21 chr5 74200076 74200314 -125429836 + L2 LINE L2 2659 2904 -410 26 39 0 20 chr5 74200445 74200483 -125429667 + AT_rich Low_complexity Low_complexity 1 39 -11 2127 112 7 0 chr5 74200483 74200770 -125429380 - AluSq SINE Alu -24 289 1 26 39 0 20 chr5 74200770 74200782 -125429368 + AT_rich Low_complexity Low_complexity 39 50 0 2015 119 0 17 chr5 74200782 74201075 -125429075 - AluJb SINE Alu -24 288 1 949 228 10 5 chr5 74201078 74201286 -125428864 - MIR SINE MIR -54 208 2 1281 156 26 0 chr5 74201305 74201536 -125428614 - L1MA8 LINE L1 -4 6287 6051 492 214 71 125 chr5 74201566 74201790 -125428360 + L2 LINE L2 3102 3313 0 33224 80 5 5 chr5 74202003 74206897 -125423253 + HERV9 LTR ERV1 2012 6983 -1416 7643 102 24 22 chr5 74206999 74208676 -125421474 + HERV9 LTR ERV1 504 8399 0 4557 114 52 0 chr5 74208692 74209340 -125420810 + LTR12 LTR ERV1 5 686 -2 1636 266 88 16 chr5 74209504 74210048 -125420102 - MLT1G1 LTR MaLR -9 586 4 690 253 112 0 chr5 74210261 74210439 -125419711 + MIR SINE MIR 41 238 -24 653 223 12 30 chr5 74211350 74211516 -125418634 - MER63 DNA MER1_type -273 789 1 2266 102 14 0 chr5 74211988 74212282 -125417868 + AluSx SINE Alu 1 298 -14 2259 95 3 7 chr5 74212431 74212736 -125417414 + AluY SINE Alu 1 304 -7 237 230 170 30 chr5 74212799 74212899 -125417251 + HAL1 LINE L1 1262 1375 -1132 2305 80 0 7 chr5 74213708 74214007 -125416143 + AluY SINE Alu 1 297 -14 1129 76 45 0 chr5 74214213 74214370 -125415780 - AluY SINE Alu -15 296 133 2558 48 0 19 chr5 74214370 74214683 -125415467 - AluY SINE Alu -4 307 1 1661 188 0 14 chr5 74214694 74214987 -125415163 - AluJo SINE Alu -23 289 1 2057 144 0 0 chr5 74215016 74215314 -125414836 + AluSx SINE Alu 1 298 -14 204 226 0 0 chr5 74215565 74215618 -125414532 + T-rich Low_complexity Low_complexity 1 53 0 2156 80 10 3 chr5 74215682 74215970 -125414180 + AluSc SINE Alu 1 290 -19 14907 179 31 13 chr5 74216250 74221331 -125408819 + L1MA4 LINE L1 2605 7713 -6 3720 229 85 98 chr5 74221342 74222855 -125407295 + MSTC-int LTR MaLR 243 1735 0 874 129 27 7 chr5 74222855 74223002 -125407148 + MSTC LTR MaLR 1 150 -278 939 223 67 13 chr5 74226068 74226306 -125403844 + MIR SINE MIR 1 251 -11 27 0 0 0 chr5 74226403 74226430 -125403720 + AT_rich Low_complexity Low_complexity 1 27 0 295 241 0 75 chr5 74226869 74227015 -125403135 - L1ME LINE L1 -324 5797 5677 1016 228 33 0 chr5 74227043 74227254 -125402896 + MIR SINE MIR 11 228 -34 357 205 0 26 chr5 74227295 74227373 -125402777 - Tigger5 DNA MER2_type -1 2322 2247 2004 144 6 10 chr5 74227582 74227918 -125402232 - AluSx SINE Alu 0 335 1 359 291 78 0 chr5 74228170 74228273 -125401877 + L2 LINE L2 3203 3313 0 1860 160 4 0 chr5 74228669 74228944 -125401206 + AluSx SINE Alu 1 276 -36 200 205 0 0 chr5 74229173 74229212 -125400938 + MIR SINE MIR 158 196 -66 222 62 0 0 chr5 74229503 74229535 -125400615 + (TC)n Simple_repeat Simple_repeat 2 33 0 936 204 34 41 chr5 74229963 74230033 -125400117 - MSTD LTR MaLR 0 396 327 1802 113 85 3 chr5 74230033 74230315 -125399835 + AluJo SINE Alu 1 305 -7 936 204 34 41 chr5 74230315 74230571 -125399579 - MSTD LTR MaLR -69 327 31 700 189 98 0 chr5 74230575 74230744 -125399406 - FRAM SINE Alu 0 176 1 1890 110 3 27 chr5 74231169 74231523 -125398627 - MER4A LTR ERV1 0 664 261 580 101 10 20 chr5 74231523 74231622 -125398528 - MER4A LTR ERV1 -566 98 1 2036 151 0 3 chr5 74231981 74232286 -125397864 - AluJb SINE Alu -8 304 1 218 317 133 0 chr5 74232537 74232657 -125397493 + L2 LINE L2 3038 3173 -140 1667 132 44 0 chr5 74232661 74232912 -125397238 + MER1B DNA MER1_type 1 262 -77 629 101 11 0 chr5 74232912 74233001 -125397149 + MER1B DNA MER1_type 184 273 -66 408 137 27 0 chr5 74233053 74233126 -125397024 + MER1B DNA MER1_type 265 339 0 325 267 95 9 chr5 74233578 74233683 -125396467 + MIR3 SINE MIR 47 160 -48 26 0 0 0 chr5 74233729 74233755 -125396395 + AT_rich Low_complexity Low_complexity 1 26 0 182 33 67 0 chr5 74234372 74234402 -125395748 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1493 170 21 103 chr5 74236308 74236637 -125393513 + AluJo SINE Alu 1 302 -10 1457 170 21 21 chr5 74236646 74236928 -125393222 - AluJb SINE Alu -30 282 1 2335 68 34 7 chr5 74236960 74237256 -125392894 + AluSp SINE Alu 1 304 -9 584 305 138 35 chr5 74237489 74238148 -125392002 + HAL1 LINE L1 272 998 -1509 777 304 71 8 chr5 74238451 74238691 -125391459 - MIR SINE MIR 0 262 8 1776 157 143 14 chr5 74238862 74239303 -125390847 - L1MD1 LINE L1 -350 5892 5395 * 1873 248 38 33 chr5 74239286 74240084 -125390066 - L1MDa LINE L1 -2282 4258 3457 1057 168 88 67 chr5 74240085 74240294 -125389856 + L1MDa LINE L1 1920 2140 -4400 2390 90 3 3 chr5 74240294 74240604 -125389546 - AluSg SINE Alu 0 310 1 1057 168 88 67 chr5 74240604 74240722 -125389428 + L1MDa LINE L1 2140 2254 -4286 12369 133 16 52 chr5 74240807 74241313 -125388837 - L1P3 LINE L1 -3134 3327 2804 3955 158 51 20 chr5 74241313 74242074 -125388076 + LTR1 LTR ERV1 1 785 0 12369 133 16 52 chr5 74242074 74242404 -125387746 - L1P3 LINE L1 -3657 2804 2464 19030 132 10 1 chr5 74242404 74246119 -125384031 - L1PA7 LINE L1 0 6154 2412 12369 133 16 52 chr5 74246119 74248705 -125381445 - L1P3 LINE L1 -3997 2464 1 733 161 53 53 chr5 74248716 74248959 -125381191 - L1MDa LINE L1 -3981 2559 2317 636 206 62 31 chr5 74248975 74249266 -125380884 + MSTD LTR MaLR 1 396 0 2791 174 93 2 chr5 74249278 74249912 -125380238 - L1MDa LINE L1 -4218 2322 1631 * 4066 191 50 18 chr5 74249908 74252034 -125378116 - L1MB7 LINE L1 0 6886 1091 23 0 0 0 chr5 74252034 74252057 -125378093 + AT_rich Low_complexity Low_complexity 1 23 0 1904 219 39 7 chr5 74252111 74252550 -125377600 - L1MDa LINE L1 -6071 469 17 2296 103 0 16 chr5 74252926 74253238 -125376912 - AluSx SINE Alu -3 309 3 194 333 130 32 chr5 74253501 74253624 -125376526 - MIR SINE MIR -124 138 4 22 113 0 0 chr5 74253746 74253852 -125376298 + AT_rich Low_complexity Low_complexity 1 106 0 333 267 93 104 chr5 74255918 74256274 -125373876 - L1MB7 LINE L1 -5759 1090 739 1245 172 11 26 chr5 74258226 74258493 -125371657 - MSTB2 LTR MaLR 0 457 195 387 138 0 0 chr5 74258497 74258555 -125371595 - MSTB2 LTR MaLR -399 58 1 541 254 285 0 chr5 74258935 74259128 -125371022 + MIR SINE MIR 2 249 -13 251 261 220 14 chr5 74259173 74259391 -125370759 - L1ME4a LINE L1 -55 6066 5804 380 230 164 24 chr5 74259408 74259573 -125370577 - L1ME4a LINE L1 -365 5756 5569 315 330 87 9 chr5 74259783 74259898 -125370252 - MIR SINE MIR -113 149 26 229 207 0 0 chr5 74260691 74260749 -125369401 + L1ME LINE L1 5791 5848 -273 452 158 26 0 chr5 74261110 74261186 -125368964 - MER58C DNA MER1_type 0 215 138 2122 119 3 3 chr5 74261807 74262109 -125368041 - AluSx SINE Alu -10 302 1 322 125 0 0 chr5 74262128 74262184 -125367966 - Alu SINE Alu 0 302 247 7103 253 131 37 chr5 74262204 74264505 -125365645 + L2 LINE L2 234 2823 -490 1381 158 174 19 chr5 74264505 74264621 -125365529 + MLT1A1 LTR MaLR 1 98 -267 2263 98 0 0 chr5 74264621 74264916 -125365234 + AluY SINE Alu 1 295 -16 1381 158 174 19 chr5 74264916 74265115 -125365035 + MLT1A1 LTR MaLR 98 365 0 7103 253 131 37 chr5 74265115 74265484 -125364666 + L2 LINE L2 2823 3156 -157 732 190 156 11 chr5 74265485 74265664 -125364486 + MER58C DNA MER1_type 2 206 -9 556 232 71 39 chr5 74265664 74265819 -125364331 + L2 LINE L2 3150 3309 -4 1020 284 103 58 chr5 74266190 74266931 -125363219 - L2 LINE L2 -177 3136 2350 1193 172 9 28 chr5 74266933 74267148 -125363002 + AluJb SINE Alu 87 297 -15 346 197 13 13 chr5 74267168 74267244 -125362906 - L2 LINE L2 -975 2339 2264 349 247 197 11 chr5 74267293 74267471 -125362679 - L2 LINE L2 -1202 2112 1902 905 266 67 47 chr5 74267588 74268011 -125362139 - L1MD3 LINE L1 0 8039 7621 198 304 130 51 chr5 74268875 74269013 -125361137 - MIR3 SINE MIR -25 183 35 21 36 0 0 chr5 74270750 74270778 -125359372 + AT_rich Low_complexity Low_complexity 1 28 0 509 285 94 34 chr5 74271237 74271619 -125358531 - L1ME LINE L1 -396 5725 5321 205 156 0 0 chr5 74271973 74272005 -125358145 + GA-rich Low_complexity Low_complexity 1 32 0 361 235 0 0 chr5 74272534 74272602 -125357548 - AluS SINE Alu -234 68 1 309 269 43 0 chr5 74272623 74272716 -125357434 + MIR3 SINE MIR 111 207 -1 6189 128 81 45 chr5 74273231 74274398 -125355752 + Tigger3b DNA MER2_type 22 1230 -1 1103 199 72 101 chr5 74274535 74274911 -125355239 - MLT1A1 LTR MaLR 0 365 1 3902 197 156 13 chr5 74274911 74276373 -125353777 - MLT1A1-int LTR MaLR 0 1735 1 1292 193 12 120 chr5 74276373 74276782 -125353368 - MLT1A1 LTR MaLR 0 365 1 384 307 16 24 chr5 74277001 74277147 -125353003 - MIR SINE MIR -65 143 10 336 264 207 14 chr5 74277986 74278163 -125351987 + MIR SINE MIR 7 216 -46 261 188 42 0 chr5 74279001 74279049 -125351101 - MER5B DNA MER1_type -128 50 1 735 242 95 26 chr5 74279413 74279644 -125350506 + MIR SINE MIR 1 247 -15 600 253 124 14 chr5 74279647 74279846 -125350304 + MIR SINE MIR 2 214 -48 2307 74 13 3 chr5 74280336 74280634 -125349516 - AluSq SINE Alu -12 301 1 1504 83 64 10 chr5 74280651 74280855 -125349295 - AluSg SINE Alu -95 215 1 222 296 61 51 chr5 74281167 74281265 -125348885 + MIR SINE MIR 91 189 -73 677 214 248 5 chr5 74281509 74281719 -125348431 + MIR SINE MIR 2 262 0 1227 231 89 27 chr5 74282287 74282528 -125347622 + MER20B DNA MER1_type 71 340 -443 2358 95 0 9 chr5 74282528 74282843 -125347307 + AluSx SINE Alu 1 312 0 1227 231 89 27 chr5 74282843 74282938 -125347212 + MER20B DNA MER1_type 340 428 -355 184 392 75 55 chr5 74283048 74283247 -125346903 + L2 LINE L2 3047 3249 -23 265 313 246 0 chr5 74283270 74283404 -125346746 - L2 LINE L2 -3 3269 3103 260 281 52 21 chr5 74283571 74283667 -125346483 - L2 LINE L2 -257 3015 2917 438 239 56 35 chr5 74283887 74284029 -125346121 - MIR SINE MIR -114 148 4 298 111 167 0 chr5 74284702 74284769 -125345381 + L1MB3 LINE L1 6106 6176 0 329 285 120 32 chr5 74285269 74285670 -125344480 + L1MC4a LINE L1 5510 5790 -372 499 303 41 28 chr5 74285839 74286057 -125344093 + L1ME3A LINE L1 5950 6170 0 332 294 120 60 chr5 74287682 74288060 -125342090 + L1M2 LINE L1 395 1233 -5616 315 295 111 62 chr5 74287842 74288279 -125341871 - L1M2 LINE L1 -5650 1199 756 * 23 0 0 0 chr5 74289361 74289384 -125340766 + AT_rich Low_complexity Low_complexity 1 23 0 1771 163 3 7 chr5 74290729 74291011 -125339139 - AluSx SINE Alu -31 281 1 473 174 50 16 chr5 74291521 74291642 -125338508 - L2 LINE L2 -3 3310 3186 25 65 0 0 chr5 74292188 74292234 -125337916 + AT_rich Low_complexity Low_complexity 1 46 0 1363 152 70 29 chr5 74292386 74292630 -125337520 + AluJb SINE Alu 1 254 -58 290 294 59 0 chr5 74293026 74293111 -125337039 - MIR3 SINE MIR 0 208 119 440 307 59 30 chr5 74293716 74293918 -125336232 + MIR SINE MIR 52 259 -3 1583 137 87 18 chr5 74294212 74294489 -125335661 - AluSg SINE Alu -14 296 1 913 177 141 0 chr5 74294629 74294821 -125335329 + MER20 DNA MER1_type 1 219 0 2167 97 24 3 chr5 74295452 74295750 -125334400 - AluSq SINE Alu -9 304 1 2138 97 21 7 chr5 74296258 74296547 -125333603 + AluSx SINE Alu 3 295 -17 509 216 38 54 chr5 74297382 74297567 -125332583 + L1MC5 LINE L1 7744 7925 -36 2487 65 0 0 chr5 74297773 74298066 -125332084 + AluY SINE Alu 1 293 -18 867 185 49 22 chr5 74298419 74298603 -125331547 - MER20 DNA MER1_type 0 219 31 30 27 0 0 chr5 74298673 74298710 -125331440 + AT_rich Low_complexity Low_complexity 1 37 0 242 288 30 23 chr5 74298904 74299036 -125331114 - L1ME LINE L1 -412 5709 5577 259 227 200 0 chr5 74299417 74299492 -125330658 - MIR SINE MIR -11 251 162 2362 81 7 0 chr5 74300132 74300428 -125329722 - AluSp SINE Alu -15 298 1 1712 164 14 7 chr5 74300634 74300920 -125329230 - AluJb SINE Alu -24 288 1 1737 154 27 20 chr5 74301539 74301838 -125328312 - AluJo SINE Alu -5 307 7 2067 143 0 7 chr5 74301857 74302165 -125327985 - AluSx SINE Alu -6 306 1 306 0 0 0 chr5 74302210 74302244 -125327906 + (TG)n Simple_repeat Simple_repeat 1 34 0 629 152 221 7 chr5 74302559 74302699 -125327451 + AluJb SINE Alu 8 179 -129 1889 116 84 7 chr5 74302699 74302974 -125327176 + AluSq SINE Alu 5 300 -13 31 82 0 0 chr5 74303443 74303516 -125326634 + AT_rich Low_complexity Low_complexity 1 73 0 2271 107 0 0 chr5 74303827 74304126 -125326024 - AluSx SINE Alu -13 299 1 2074 108 14 0 chr5 74304380 74304668 -125325482 + AluSx SINE Alu 4 295 -17 1386 137 61 11 chr5 74305265 74305528 -125324622 - L1PA16 LINE L1 0 6166 5891 1838 188 0 0 chr5 74305689 74305992 -125324158 + AluJo SINE Alu 1 303 -9 26 0 0 0 chr5 74306033 74306059 -125324091 + AT_rich Low_complexity Low_complexity 1 26 0 1493 170 41 26 chr5 74306129 74306399 -125323751 + AluJo SINE Alu 20 293 -19 325 238 122 80 chr5 74306959 74307266 -125322884 - L1ME LINE L1 -760 5482 5274 2623 55 0 0 chr5 74307368 74307677 -125322473 + AluY SINE Alu 1 309 -2 1907 83 4 12 chr5 74307985 74308239 -125321911 + AluSq SINE Alu 44 295 -18 497 245 137 9 chr5 74308245 74308478 -125321672 - MER114 LTR ERV -104 544 282 2118 135 0 0 chr5 74308482 74308779 -125321371 + AluSx SINE Alu 1 297 -15 374 222 118 39 chr5 74308818 74308971 -125321179 - MER114 LTR ERV -462 186 22 234 135 0 0 chr5 74309187 74309224 -125320926 - L1MC5 LINE L1 -1219 6742 6706 326 304 40 0 chr5 74309247 74309372 -125320778 - L1ME LINE L1 -1479 4667 4538 2154 109 3 7 chr5 74309376 74309679 -125320471 - AluSq SINE Alu -11 302 1 331 268 25 57 chr5 74309688 74309845 -125320305 - L1ME LINE L1 -1665 4481 4330 200 217 0 121 chr5 74310098 74310181 -125319969 - MIR SINE MIR -42 220 148 2314 71 0 24 chr5 74310197 74310494 -125319656 - AluSx SINE Alu -22 290 1 357 309 193 14 chr5 74310669 74311031 -125319119 - L2 LINE L2 -73 3240 2814 576 221 186 17 chr5 74311054 74311226 -125318924 + MER58C DNA MER1_type 2 202 -13 400 303 40 50 chr5 74311267 74311465 -125318685 - L2 LINE L2 -626 2688 2493 210 259 0 56 chr5 74312779 74312833 -125317317 - L2 LINE L2 -20 3252 3202 412 281 97 13 chr5 74312881 74313119 -125317031 + MIR SINE MIR 3 260 -2 214 245 0 38 chr5 74313437 74313490 -125316660 + L2 LINE L2 3263 3313 0 207 190 190 0 chr5 74314225 74314304 -125315846 + MIR SINE MIR 96 189 -73 235 283 0 0 chr5 74315967 74316020 -125314130 - MER5B DNA MER1_type 0 178 126 2533 62 0 3 chr5 74316030 74316335 -125313815 + AluY SINE Alu 1 304 -7 201 154 0 0 chr5 74316804 74316843 -125313307 + T-rich Low_complexity Low_complexity 2 40 0 303 284 85 19 chr5 74317387 74317598 -125312552 - L1ME LINE L1 -359 5762 5538 478 246 9 9 chr5 74318761 74318875 -125311275 - FLAM_C SINE Alu -27 116 3 1908 144 3 23 chr5 74319123 74319422 -125310728 + AluSx SINE Alu 1 293 -19 2232 113 0 7 chr5 74319752 74320052 -125310098 + AluSx SINE Alu 3 300 -12 1944 107 0 0 chr5 74320321 74320583 -125309567 - AluSg SINE Alu -5 305 44 210 91 0 0 chr5 74322395 74322428 -125307722 + (ATG)n Simple_repeat Simple_repeat 2 34 0 2994 176 92 24 chr5 74322488 74322945 -125307205 - L1MB8 LINE L1 -5 6173 5749 213 65 0 0 chr5 74322945 74322976 -125307174 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1524 151 21 48 chr5 74322976 74323267 -125306883 - AluJb SINE Alu -29 283 1 2994 176 92 24 chr5 74323267 74323524 -125306626 - L1MB8 LINE L1 -428 5750 5409 198 258 113 0 chr5 74323779 74323841 -125306309 + MER5B DNA MER1_type 4 72 -106 675 112 124 189 chr5 74323922 74324155 -125305995 - MER20 DNA MER1_type 0 219 2 355 255 102 79 chr5 74324286 74324502 -125305648 - MIR SINE MIR -5 257 37 201 154 0 0 chr5 74324939 74324978 -125305172 + T-rich Low_complexity Low_complexity 3 41 0 278 105 0 0 chr5 74325055 74325093 -125305057 - MSTD LTR MaLR -2 455 418 * 1094 239 107 4 chr5 74325091 74325363 -125304787 - MSTD LTR MaLR -96 300 1 22 0 0 0 chr5 74325409 74325431 -125304719 + AT_rich Low_complexity Low_complexity 1 22 0 2180 108 27 0 chr5 74325834 74326129 -125304021 + AluSg SINE Alu 1 303 -7 1990 147 17 0 chr5 74326625 74326925 -125303225 + AluSx SINE Alu 1 305 -7 2276 107 0 0 chr5 74328276 74328574 -125301576 - AluSx SINE Alu -13 299 2 210 268 232 43 chr5 74328673 74328837 -125301313 - L2 LINE L2 0 3313 3119 1701 167 39 0 chr5 74330078 74330360 -125299790 - AluJb SINE Alu -19 293 1 2307 88 3 0 chr5 74330404 74330698 -125299452 + AluY SINE Alu 3 297 -14 923 152 0 7 chr5 74331765 74331910 -125298240 + MER2 DNA MER2_type 1 144 -201 246 269 0 0 chr5 74331913 74331965 -125298185 + MER2 DNA MER2_type 269 320 -25 531 141 0 71 chr5 74333359 74333458 -125296692 + AluS SINE Alu 3 94 -218 2069 132 0 0 chr5 74333607 74333896 -125296254 + AluY SINE Alu 1 289 -22 309 288 141 42 chr5 74334133 74334324 -125295826 - L1MC5 LINE L1 -32 7929 7720 1300 201 74 66 chr5 74334329 74334616 -125295534 - L1MC5 LINE L1 -477 7484 7190 1010 190 42 32 chr5 74334616 74334832 -125295318 + MER20 DNA MER1_type 2 219 0 1300 201 74 66 chr5 74334832 74335047 -125295103 - L1MC5 LINE L1 -771 7190 6978 449 226 52 0 chr5 74335169 74335303 -125294847 - L1MC5 LINE L1 -1148 6888 6693 21 0 0 0 chr5 74335483 74335504 -125294646 + AT_rich Low_complexity Low_complexity 1 21 0 2206 108 7 0 chr5 74335805 74336102 -125294048 + AluSx SINE Alu 1 299 -13 21 57 0 0 chr5 74336139 74336174 -125293976 + AT_rich Low_complexity Low_complexity 1 35 0 31 0 0 0 chr5 74336835 74336866 -125293284 + AT_rich Low_complexity Low_complexity 1 31 0 499 239 87 28 chr5 74340825 74341043 -125289107 + L1MC5 LINE L1 7307 7537 -424 1789 100 8 4 chr5 74341056 74341306 -125288844 + AluSg SINE Alu 43 293 -17 316 116 0 0 chr5 74343688 74343731 -125286419 - THE1B LTR MaLR 0 355 313 2185 102 0 3 chr5 74343731 74344015 -125286135 + AluSq SINE Alu 1 283 -30 1908 133 36 39 chr5 74344029 74344366 -125285784 - THE1B LTR MaLR -28 336 1 1939 158 0 7 chr5 74344830 74345133 -125285017 + AluSx SINE Alu 1 301 -11 2128 105 20 7 chr5 74345492 74345796 -125284354 - AluSg SINE Alu 0 310 3 246 269 0 0 chr5 74346893 74346945 -125283205 - MER2 DNA MER2_type -25 320 269 923 152 0 7 chr5 74346948 74347093 -125283057 - MER2 DNA MER2_type -201 144 1 1965 95 0 0 chr5 74348160 74348413 -125281737 - AluSg SINE Alu -14 296 44 210 91 0 0 chr5 74350224 74350257 -125279893 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1313 181 82 20 chr5 74350317 74350621 -125279529 - L1MB8 LINE L1 -5 6173 5851 1622 185 3 32 chr5 74351644 74351952 -125278198 + AluJb SINE Alu 1 299 -13 25 31 0 0 chr5 74353003 74353035 -125277115 + AT_rich Low_complexity Low_complexity 1 32 0 213 39 0 0 chr5 74354711 74354737 -125275413 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 30 59 0 0 chr5 74355229 74355280 -125274870 + AT_rich Low_complexity Low_complexity 1 51 0 2113 137 7 0 chr5 74358863 74359169 -125270981 - AluSx SINE Alu -4 308 1 1480 119 32 97 chr5 74359873 74360184 -125269966 - AluSx SINE Alu -20 292 2 349 300 182 41 chr5 74360547 74360767 -125269383 - L1MB8 LINE L1 -344 5777 5527 1034 274 265 27 chr5 74360886 74361805 -125268345 - L2 LINE L2 -85 3228 2078 801 168 15 0 chr5 74362382 74362513 -125267637 + FLAM_C SINE Alu 1 133 0 1427 181 12 12 chr5 74362529 74362783 -125267367 + AluJo SINE Alu 34 287 -25 303 336 96 0 chr5 74363007 74363132 -125267018 + L1MC/D LINE L1 5474 5610 -2198 306 274 82 82 chr5 74363225 74363528 -125266622 + L1ME LINE L1 5448 5750 -412 192 40 0 0 chr5 74363837 74363862 -125266288 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 2102 107 10 13 chr5 74363910 74364220 -125265930 - AluSq SINE Alu 0 313 5 236 146 0 0 chr5 74364371 74364412 -125265738 - MADE1 DNA Mariner 0 80 40 360 248 170 33 chr5 74365049 74365202 -125264948 - MER5A DNA MER1_type -7 182 9 556 246 0 16 chr5 74365263 74365385 -125264765 + L2 LINE L2 3192 3311 -2 415 211 274 46 chr5 74365392 74365567 -125264583 - MIR SINE MIR -47 215 1 1239 116 40 5 chr5 74366410 74366609 -125263541 - THE1C LTR MaLR -169 206 1 400 229 29 31 chr5 74366629 74366796 -125263354 - L1M2 LINE L1 -4319 1897 1545 2347 74 0 7 chr5 74366796 74367137 -125263013 - AluSp SINE Alu 0 341 3 640 300 106 49 chr5 74367258 74367417 -125262733 - L1MEd LINE L1 -4862 1257 1108 507 17 0 0 chr5 74367417 74367477 -125262673 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 2029 109 0 7 chr5 74367477 74367753 -125262397 - AluSx SINE Alu -38 274 1 640 300 106 49 chr5 74367753 74367997 -125262153 - L1MEd LINE L1 -5011 1108 879 1771 165 46 0 chr5 74367997 74368282 -125261868 - AluJo SINE Alu -14 298 1 640 300 106 49 chr5 74368282 74368706 -125261444 - L1MEd LINE L1 -5240 879 381 2253 98 9 25 chr5 74368893 74369208 -125260942 + AluSx SINE Alu 1 310 -2 12945 111 55 39 chr5 74369222 74372569 -125257581 + HERV9 LTR ERV1 17 1909 -32 315 181 0 64 chr5 74422639 74422733 -125207417 + MLT1J LTR MaLR 415 502 -9 187 241 19 0 chr5 74422925 74422979 -125207171 - L2 LINE L2 -11 3261 3207 315 268 0 0 chr5 74423753 74423824 -125206326 + MIR SINE MIR 48 118 -144 1463 87 111 0 chr5 74423847 74423950 -125206200 + MER30 DNA MER1_type 1 91 -139 261 0 0 0 chr5 74423950 74423979 -125206171 + (CA)n Simple_repeat Simple_repeat 2 30 0 1463 87 111 0 chr5 74423979 74424082 -125206068 + MER30 DNA MER1_type 91 230 0 15276 31 0 0 chr5 74424305 74426257 -125203893 - L1P LINE L1 -2369 3777 1826 244 380 0 0 chr5 74426257 74426336 -125203814 + L2 LINE L2 2992 3070 -202 22 70 0 0 chr5 74426382 74426425 -125203725 + AT_rich Low_complexity Low_complexity 1 43 0 201 153 153 34 chr5 74426450 74426509 -125203641 + L2 LINE L2 3242 3307 -6 189 0 0 0 chr5 74426551 74426572 -125203578 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 911 169 0 7 chr5 74426572 74426720 -125203430 - AluSg/x SINE Alu -29 280 134 2001 148 0 16 chr5 74426722 74427033 -125203117 - AluSx SINE Alu -6 306 1 2447 144 25 14 chr5 74427035 74427471 -125202679 - L1MC1 LINE L1 -506 5827 5387 1049 213 142 0 chr5 74427479 74427732 -125202418 - AluJo SINE Alu -18 294 6 528 147 7 44 chr5 74427739 74427875 -125202275 - L1MC1 LINE L1 -940 5393 5263 * 27533 93 7 9 chr5 74427858 74430611 -125199539 - L1PA7 LINE L1 -6 6463 3732 2889 3 0 0 chr5 74430611 74430922 -125199228 - AluY SINE Alu 0 311 1 27533 93 7 9 chr5 74430922 74433245 -125196905 - L1PA7 LINE L1 -2737 3732 1406 2570 102 3 0 chr5 74433241 74433605 -125196545 - L1PA7 LINE L1 -6096 365 1 * 684 228 11 0 chr5 74433608 74433797 -125196353 - L1MC1 LINE L1 -852 5294 5104 892 198 0 47 chr5 74433910 74434142 -125196008 - L1MC1 LINE L1 -1050 5096 4876 2197 81 17 7 chr5 74434143 74434439 -125195711 - AluY SINE Alu -12 299 1 1028 48 0 62 chr5 74434447 74434592 -125195558 - L1PA7 LINE L1 -16 6138 6003 1387 161 60 85 chr5 74434596 74434912 -125195238 - AluJb SINE Alu 0 312 5 439 222 0 0 chr5 74434920 74435019 -125195131 - L1MC1 LINE L1 -1387 4759 4661 * 1005 261 26 32 chr5 74435017 74435381 -125194769 - L1ME LINE L1 -381 6134 5771 931 307 41 4 chr5 74435404 74435892 -125194258 - L1ME LINE L1 -2285 4255 3750 1426 166 120 12 chr5 74435902 74436161 -125193989 - AluJb SINE Alu -25 287 1 775 220 65 67 chr5 74436166 74436393 -125193757 - L1MC5 LINE L1 -412 7549 7322 2185 103 3 3 chr5 74436393 74436684 -125193466 - AluSx SINE Alu -18 294 4 775 220 65 67 chr5 74436684 74436828 -125193322 - L1MC5 LINE L1 -639 7322 7179 22 0 0 0 chr5 74436873 74436895 -125193255 + AT_rich Low_complexity Low_complexity 1 22 0 426 246 9 70 chr5 74436982 74437197 -125192953 - L1ME LINE L1 -4929 1792 1591 303 218 39 0 chr5 74437401 74437479 -125192671 - L1ME LINE L1 -5164 1376 1296 1781 139 5 72 chr5 74437883 74438092 -125192058 - MER46B DNA MER2_type -2495 236 15 2385 71 13 3 chr5 74438092 74438400 -125191750 - AluY SINE Alu 0 311 1 1781 139 5 72 chr5 74438400 74438556 -125191594 - MER46B DNA MER2_type -2716 15 20 2426 88 0 0 chr5 74438556 74438862 -125191288 - AluSq SINE Alu -7 306 1 1781 139 5 72 chr5 74438862 74438882 -125191268 - MER46B DNA MER2_type -2710 21 1 2337 86 0 0 chr5 74439382 74439672 -125190478 + AluSg SINE Alu 1 290 -20 1906 159 7 3 chr5 74440151 74440441 -125189709 + AluJo SINE Alu 1 291 -21 180 231 58 0 chr5 74442178 74442230 -125187920 - MIR SINE MIR -63 145 91 2215 102 3 0 chr5 74442303 74442588 -125187562 - AluSq SINE Alu -27 286 1 250 154 0 0 chr5 74443399 74443438 -125186712 + MER4E LTR ERV1 654 692 -74 365 296 66 84 chr5 74444214 74444593 -125185557 + L1MEd LINE L1 685 1056 -5063 335 212 38 76 chr5 74444598 74444730 -125185420 + L1MEd LINE L1 1112 1238 -4881 731 216 238 19 chr5 74444809 74445078 -125185072 + HsTC2a DNA Tc2 51 378 -366 5776 97 41 12 chr5 74445087 74446353 -125183797 + L1PA14 LINE L1 4868 6158 -3 1985 152 73 44 chr5 74446440 74446484 -125183666 - MSTC LTR MaLR -7 421 380 2050 111 31 3 chr5 74446484 74446772 -125183378 - AluSx SINE Alu -16 296 1 1985 152 73 44 chr5 74446772 74447136 -125183014 - MSTC LTR MaLR -48 380 1 2353 100 0 0 chr5 74447185 74447486 -125182664 + AluSq SINE Alu 1 301 -12 29 0 0 0 chr5 74448089 74448118 -125182032 + GC_rich Low_complexity Low_complexity 1 29 0 2538 57 0 0 chr5 74449431 74449729 -125180421 + AluY SINE Alu 1 298 -13 962 151 0 35 chr5 74450049 74450221 -125179929 - FRAM SINE Alu -11 165 1 290 293 90 38 chr5 74450271 74450404 -125179746 + MER91A DNA MER1_type 50 189 -7 2265 122 3 0 chr5 74450604 74450907 -125179243 - AluSx SINE Alu -8 304 1 195 139 0 0 chr5 74451207 74451243 -125178907 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 1531 178 20 38 chr5 74451243 74451416 -125178734 - AluJo SINE Alu -24 288 114 2227 115 7 0 chr5 74451416 74451720 -125178430 + AluSq SINE Alu 1 306 -7 2264 98 3 7 chr5 74451720 74452015 -125178135 + AluSp SINE Alu 1 295 -18 1531 178 20 38 chr5 74452015 74452133 -125178017 - AluJo SINE Alu -196 116 1 806 170 0 28 chr5 74452344 74452485 -125177665 + AluJ SINE Alu 5 141 -171 1173 125 0 18 chr5 74452533 74452701 -125177449 + AluJ SINE Alu 145 309 -3 1411 139 171 19 chr5 74452888 74453146 -125177004 + AluJo SINE Alu 1 297 -15 21 0 0 0 chr5 74453214 74453235 -125176915 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 74454167 74454205 -125175945 + AT_rich Low_complexity Low_complexity 1 38 0 1439 172 75 0 chr5 74454237 74454397 -125175753 - AluJo SINE Alu -12 300 153 207 0 0 0 chr5 74454397 74454420 -125175730 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1439 172 75 0 chr5 74454420 74454538 -125175612 - AluJo SINE Alu -159 153 1 24 32 0 0 chr5 74454538 74454569 -125175581 + AT_rich Low_complexity Low_complexity 1 31 0 865 142 0 8 chr5 74454569 74454703 -125175447 - FLAM_C SINE Alu -10 133 1 2359 103 0 13 chr5 74454987 74455299 -125174851 + AluSx SINE Alu 1 308 -4 204 283 94 19 chr5 74455800 74455906 -125174244 - MIR SINE MIR -28 234 121 1530 135 128 14 chr5 74455945 74456234 -125173916 + MER44D DNA MER2_type 18 609 0 243 343 80 55 chr5 74456497 74456698 -125173452 + L2 LINE L2 1168 1373 -1941 268 259 12 12 chr5 74458091 74458172 -125171978 - L2 LINE L2 -62 3251 3171 611 305 16 5 chr5 74458376 74458566 -125171584 - MLT1I LTR MaLR 0 409 218 545 221 71 0 chr5 74458614 74458741 -125171409 + L2 LINE L2 3161 3296 -17 441 317 107 49 chr5 74458879 74459327 -125170823 - L2 LINE L2 -31 3282 2809 395 75 0 0 chr5 74459329 74459382 -125170768 + MADE1 DNA Mariner 1 53 -27 971 303 194 19 chr5 74459382 74459861 -125170289 - L2 LINE L2 -531 2783 2389 925 201 107 63 chr5 74459861 74460180 -125169970 + MER46C DNA MER2_type 4 336 -2 971 303 194 19 chr5 74460180 74460475 -125169675 - L2 LINE L2 -925 2389 1874 1768 149 30 20 chr5 74460752 74461054 -125169096 - AluJb SINE Alu -2 310 6 6242 135 50 36 chr5 74461727 74461820 -125168330 - Tigger3b DNA MER2_type -1798 1230 1140 2185 136 3 0 chr5 74461820 74462128 -125168022 + AluSx SINE Alu 1 309 -3 6242 135 50 36 chr5 74462128 74462854 -125167296 - Tigger3b DNA MER2_type -1888 1140 386 2067 135 3 0 chr5 74462854 74463151 -125166999 + AluSx SINE Alu 1 298 -14 6242 135 50 36 chr5 74463151 74463542 -125166608 - Tigger3b DNA MER2_type -2642 386 2 2344 87 7 0 chr5 74463566 74463864 -125166286 + AluSc SINE Alu 1 300 -9 337 188 29 0 chr5 74464825 74464894 -125165256 + MER103 DNA DNA 9 79 -87 2041 102 3 61 chr5 74464896 74465209 -125164941 - AluSg SINE Alu -15 295 1 2369 91 0 3 chr5 74465504 74465811 -125164339 - AluSg SINE Alu -2 308 3 2313 83 10 0 chr5 74466023 74466323 -125163827 + AluY SINE Alu 1 303 -8 2085 100 0 0 chr5 74466491 74466762 -125163388 - AluSx SINE Alu -13 299 29 934 143 0 0 chr5 74467394 74467527 -125162623 + AluJ SINE Alu 1 133 -179 46 101 0 0 chr5 74467527 74467685 -125162465 + AT_rich Low_complexity Low_complexity 1 158 0 82 78 0 0 chr5 74467818 74467998 -125162152 + AT_rich Low_complexity Low_complexity 1 180 0 747 142 92 21 chr5 74467998 74468139 -125162011 + AluJ SINE Alu 129 279 -33 345 259 9 56 chr5 74469023 74469131 -125161019 - L2 LINE L2 -4 3309 3207 2167 113 17 0 chr5 74470520 74470812 -125159338 + AluSx SINE Alu 3 299 -13 561 285 108 14 chr5 74473116 74473330 -125156820 - MIR SINE MIR 0 262 29 249 273 133 8 chr5 74473793 74473921 -125156229 - MER117 DNA MER1_type -51 146 3 649 296 114 45 chr5 74473938 74474340 -125155810 - MLT1K LTR MaLR -12 576 147 2243 112 7 0 chr5 74474674 74474969 -125155181 + AluSq SINE Alu 1 297 -16 1809 199 0 6 chr5 74475304 74475616 -125154534 - AluJo SINE Alu -2 310 1 505 204 68 23 chr5 74475660 74475683 -125154467 + MIR SINE MIR 67 87 -175 2221 97 3 3 chr5 74475683 74475991 -125154159 - AluSg SINE Alu -2 308 1 505 204 68 23 chr5 74475991 74476099 -125154051 + MIR SINE MIR 87 204 -58 1250 129 0 10 chr5 74476452 74476630 -125153520 - AluSq SINE Alu -2 311 134 2361 99 0 0 chr5 74476630 74476933 -125153217 - AluSq SINE Alu -10 303 1 1250 129 0 10 chr5 74476933 74476947 -125153203 - AluSq SINE Alu -179 134 121 401 133 0 0 chr5 74477268 74477328 -125152822 + AluS SINE Alu 1 60 -258 262 267 35 35 chr5 74477328 74477414 -125152736 - L2 LINE L2 -623 2691 2606 2184 105 0 30 chr5 74477433 74477737 -125152413 + AluSq SINE Alu 1 295 -18 2081 141 0 3 chr5 74477940 74478246 -125151904 - AluSx SINE Alu -7 305 1 243 79 0 0 chr5 74478254 74478292 -125151858 + (T)n Simple_repeat Simple_repeat 1 38 0 652 180 34 48 chr5 74478599 74478805 -125151345 - L1M4 LINE L1 -920 5226 5024 * 679 187 7 7 chr5 74478803 74478958 -125151192 + L1MD3 LINE L1 6902 7056 -939 3327 195 64 47 chr5 74478997 74479170 -125150980 + L1ME1 LINE L1 5314 5483 -851 1687 172 14 10 chr5 74479170 74479466 -125150684 + AluJb SINE Alu 1 297 -15 3327 195 64 47 chr5 74479466 74479898 -125150252 + L1ME1 LINE L1 5483 5906 -428 2252 99 10 3 chr5 74479898 74480200 -125149950 - AluSg SINE Alu -6 304 1 3327 195 64 47 chr5 74480200 74480441 -125149709 + L1ME1 LINE L1 5906 6332 -2 281 216 54 40 chr5 74480441 74480515 -125149635 - L2 LINE L2 -843 2471 2397 2328 178 17 5 chr5 74480787 74481208 -125148942 - MSTB LTR MaLR 0 426 1 2237 123 0 0 chr5 74481286 74481596 -125148554 - AluSx SINE Alu -2 310 1 316 241 103 0 chr5 74481597 74481684 -125148466 - MER5B DNA MER1_type -78 100 5 * 401 259 163 48 chr5 74481679 74481826 -125148324 + MER5A DNA MER1_type 26 189 0 959 194 44 6 chr5 74481874 74482054 -125148096 + MER5A DNA MER1_type 3 189 0 244 109 176 118 chr5 74482111 74482230 -125147920 + L1MC4 LINE L1 7812 7937 -105 28 0 0 0 chr5 74483574 74483602 -125146548 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 74484886 74484908 -125145242 + AT_rich Low_complexity Low_complexity 1 22 0 180 235 0 59 chr5 74485319 74485370 -125144780 + MIR SINE MIR 38 85 -123 406 256 91 50 chr5 74485379 74485500 -125144650 - L2 LINE L2 0 3313 3188 27 49 0 0 chr5 74485821 74485862 -125144288 + AT_rich Low_complexity Low_complexity 1 41 0 1982 140 3 7 chr5 74486389 74486689 -125143461 + AluJb SINE Alu 1 299 -13 230 217 117 0 chr5 74486694 74486754 -125143396 + MIR3 SINE MIR 119 185 -23 1840 174 3 0 chr5 74486760 74487053 -125143097 - AluJb SINE Alu -16 296 3 2039 119 3 10 chr5 74487104 74487399 -125142751 - AluSx SINE Alu -19 293 1 2011 152 0 13 chr5 74487613 74487929 -125142221 - AluJb SINE Alu 0 312 1 2199 93 7 13 chr5 74489011 74489312 -125140838 - AluSq SINE Alu -14 299 1 24 0 0 0 chr5 74489324 74489348 -125140802 + AT_rich Low_complexity Low_complexity 1 24 0 557 232 38 103 chr5 74489419 74489604 -125140546 + MER5B DNA MER1_type 6 178 0 2146 131 0 13 chr5 74490900 74491214 -125138936 + AluSx SINE Alu 1 310 -2 1353 159 22 0 chr5 74491432 74491659 -125138491 - MER46A DNA MER2_type -4 232 1 1604 171 16 33 chr5 74494182 74494486 -125135664 - AluJo SINE Alu -13 299 1 340 324 14 14 chr5 74494504 74494646 -125135504 + L1MC4a LINE L1 5524 5665 -2143 240 35 0 0 chr5 74494652 74494681 -125135469 + (CA)n Simple_repeat Simple_repeat 2 30 0 222 267 0 17 chr5 74494690 74494750 -125135400 + (TA)n Simple_repeat Simple_repeat 2 60 0 350 241 146 7 chr5 74494800 74494937 -125135213 + L1MC4a LINE L1 5694 5849 -1959 1090 195 0 35 chr5 74495109 74495151 -125134999 - AluJb SINE Alu -11 301 259 2080 143 141 5 chr5 74495151 74495528 -125134622 + MSTA LTR MaLR 1 428 0 1090 195 0 35 chr5 74495528 74495711 -125134439 - AluJb SINE Alu -53 259 84 21 0 0 0 chr5 74495855 74495876 -125134274 + AT_rich Low_complexity Low_complexity 1 21 0 255 125 0 0 chr5 74495920 74495960 -125134190 + (T)n Simple_repeat Simple_repeat 1 40 0 2459 204 51 16 chr5 74496288 74496858 -125133292 - L1MD1 LINE L1 -1 6241 5652 1057 182 75 25 chr5 74496844 74497279 -125132871 - L1MDa LINE L1 -3748 2792 2341 * 346 235 8 84 chr5 74497269 74497315 -125132835 - L1MDa LINE L1 -5941 589 541 * 1683 180 0 20 chr5 74497315 74497621 -125132529 - AluJo SINE Alu -12 300 1 346 235 8 84 chr5 74497621 74497693 -125132457 - L1MDa LINE L1 -5989 541 480 485 212 123 85 chr5 74498315 74498551 -125131599 - L1MC4 LINE L1 -5 8037 7793 796 203 35 50 chr5 74498586 74498847 -125131303 - L1MC4a LINE L1 -1755 6053 5797 1189 182 94 76 chr5 74498847 74499082 -125131068 + MER2 DNA MER2_type 2 231 -114 1457 185 11 28 chr5 74499082 74499396 -125130754 - AluJb SINE Alu 0 309 1 1189 182 94 76 chr5 74499396 74499423 -125130727 + MER2 DNA MER2_type 231 256 -89 1870 159 17 0 chr5 74499423 74499725 -125130425 + AluSx SINE Alu 2 308 -4 1189 182 94 76 chr5 74499725 74499789 -125130361 + MER2 DNA MER2_type 256 337 -8 1198 244 64 11 chr5 74499800 74500125 -125130025 - L1MC4a LINE L1 -2013 5795 5448 2842 3 0 0 chr5 74500125 74500430 -125129720 - AluY SINE Alu -6 305 1 1198 244 64 11 chr5 74500430 74500461 -125129689 - L1MC4a LINE L1 -2360 5448 5420 333 159 0 0 chr5 74501109 74501172 -125128978 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 304 29 0 0 chr5 74501306 74501341 -125128809 - U2 snRNA snRNA -153 35 1 507 180 64 100 chr5 74501471 74501548 -125128602 - L1MC5 LINE L1 -424 7537 7459 477 0 0 0 chr5 74501548 74501601 -125128549 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 2045 120 4 0 chr5 74501602 74501878 -125128272 - AluSc SINE Alu -32 277 1 507 180 64 100 chr5 74501878 74502048 -125128102 - L1MC5 LINE L1 -501 7460 7297 24 0 0 0 chr5 74502755 74502779 -125127371 + AT_rich Low_complexity Low_complexity 1 24 0 2016 125 3 22 chr5 74502820 74503131 -125127019 - AluSx SINE Alu -7 305 1 2002 143 0 0 chr5 74503183 74503484 -125126666 - AluY SINE Alu -10 301 1 26 50 0 0 chr5 74504108 74504148 -125126002 + AT_rich Low_complexity Low_complexity 1 40 0 2243 91 0 3 chr5 74504675 74504973 -125125177 + AluY SINE Alu 1 297 -14 309 202 46 64 chr5 74505092 74505201 -125124949 + L1ME4a LINE L1 6014 6120 -1 23 33 0 0 chr5 74506183 74506213 -125123937 + AT_rich Low_complexity Low_complexity 1 30 0 1913 149 53 3 chr5 74507397 74507718 -125122432 - L1MC1 LINE L1 -5 6328 5992 1180 198 123 0 chr5 74508220 74508488 -125121662 - AluJb SINE Alu -1 301 1 1627 179 14 14 chr5 74509282 74509573 -125120577 - AluJo SINE Alu -21 291 1 24 53 0 0 chr5 74509788 74509826 -125120324 + AT_rich Low_complexity Low_complexity 1 38 0 513 330 29 19 chr5 74510658 74510864 -125119286 - MIR SINE MIR -34 228 21 191 314 0 43 chr5 74515676 74515746 -125114404 - MIR3 SINE MIR -27 181 115 200 352 101 40 chr5 74516046 74516273 -125113877 + L2 LINE L2 2818 3058 -214 500 227 23 0 chr5 74516668 74516796 -125113354 - L1ME4a LINE L1 0 6121 5991 396 232 177 18 chr5 74516857 74517021 -125113129 + MIR SINE MIR 69 258 -4 1946 144 6 0 chr5 74517121 74517433 -125112717 - L1PB4 LINE L1 -3 6153 5840 373 330 94 0 chr5 74517728 74517952 -125112198 - L1ME LINE L1 -366 5755 5511 737 209 50 11 chr5 74518084 74518266 -125111884 + MER5A DNA MER1_type 1 189 0 900 163 163 12 chr5 74518274 74518531 -125111619 - MER33 DNA MER1_type 0 324 29 359 270 56 0 chr5 74519024 74519113 -125111037 + L2 LINE L2 3208 3301 -12 3230 109 68 18 chr5 74520596 74521099 -125109051 - MER1A DNA MER1_type -1 528 1 750 155 161 0 chr5 74521397 74521558 -125108592 + MER5A DNA MER1_type 1 187 -2 817 219 6 19 chr5 74523407 74523567 -125106583 - FRAM SINE Alu -17 159 2 3837 139 48 9 chr5 74523625 74524294 -125105856 + L1MB3 LINE L1 5488 6182 -1 21 0 0 0 chr5 74524444 74524465 -125105685 + AT_rich Low_complexity Low_complexity 1 21 0 189 226 0 81 chr5 74524876 74524938 -125105212 + L2 LINE L2 3214 3270 -2 22 56 0 0 chr5 74525268 74525304 -125104846 + AT_rich Low_complexity Low_complexity 1 36 0 3343 261 166 35 chr5 74526410 74528259 -125101891 - L2 LINE L2 -3 3310 1217 433 259 52 62 chr5 74528261 74528454 -125101696 - L2 LINE L2 -2791 523 333 28 29 0 0 chr5 74528532 74528567 -125101583 + AT_rich Low_complexity Low_complexity 1 35 0 1825 139 0 65 chr5 74528924 74529234 -125100916 + AluJb SINE Alu 2 291 -21 23 33 0 0 chr5 74529521 74529551 -125100599 + AT_rich Low_complexity Low_complexity 1 30 0 251 297 34 17 chr5 74529704 74529822 -125100328 + L1ME LINE L1 3726 3845 -2301 284 317 100 36 chr5 74529852 74530133 -125100017 + L1ME LINE L1 3922 4220 -1926 473 315 43 78 chr5 74530235 74530479 -125099671 + L1ME LINE L1 4459 4710 -1436 838 213 0 19 chr5 74530479 74530639 -125099511 - FRAM SINE Alu -9 157 1 473 315 43 78 chr5 74530639 74531019 -125099131 + L1ME LINE L1 4710 5061 -1085 1123 231 4 21 chr5 74531020 74531263 -125098887 - MER8 DNA MER2_type 0 239 1 300 297 184 17 chr5 74531562 74531855 -125098295 + L1ME LINE L1 5383 5724 -397 1689 186 3 0 chr5 74532204 74532489 -125097661 + AluJo SINE Alu 1 286 -26 212 310 47 58 chr5 74532490 74532661 -125097489 - L2 LINE L2 -149 3164 2996 293 362 40 11 chr5 74532819 74532993 -125097157 - MER5A DNA MER1_type -4 185 7 26 50 0 0 chr5 74533636 74533676 -125096474 + AT_rich Low_complexity Low_complexity 1 40 0 208 244 0 22 chr5 74534061 74534106 -125096044 - L2 LINE L2 -18 3295 3252 2185 104 0 39 chr5 74534252 74534559 -125095591 - AluSc SINE Alu -14 295 1 248 65 0 0 chr5 74534562 74534593 -125095557 - U2 snRNA snRNA -1 187 157 2177 123 0 3 chr5 74534987 74535288 -125094862 + AluSx SINE Alu 3 302 -10 2190 108 0 14 chr5 74535616 74535941 -125094209 - AluSx SINE Alu 0 312 1 2190 97 17 0 chr5 74536445 74536733 -125093417 + AluSc SINE Alu 1 293 -16 1868 165 0 0 chr5 74536869 74537204 -125092946 + AluSx SINE Alu 1 335 0 2321 89 3 7 chr5 74537219 74537521 -125092629 + AluSg SINE Alu 1 301 -9 257 306 116 27 chr5 74538143 74538290 -125091860 + L2 LINE L2 2807 2966 -306 28 29 0 0 chr5 74542095 74542130 -125088020 + AT_rich Low_complexity Low_complexity 1 35 0 1919 152 0 3 chr5 74542317 74542614 -125087536 + AluSx SINE Alu 1 296 -16 941 246 99 14 chr5 74542788 74543135 -125087015 - MLT1J2 LTR MaLR -50 396 3 26 0 0 0 chr5 74543265 74543291 -125086859 + AT_rich Low_complexity Low_complexity 1 26 0 247 196 71 0 chr5 74543378 74543434 -125086716 - MLT1L LTR MaLR -2 613 554 2212 137 9 18 chr5 74543434 74543776 -125086374 - MER1B DNA MER1_type 0 339 1 378 251 129 49 chr5 74544258 74544577 -125085573 + L1MC4a LINE L1 5539 5727 -394 2102 102 31 17 chr5 74544606 74544899 -125085251 + AluSx SINE Alu 1 297 -15 203 0 37 0 chr5 74545179 74545206 -125084944 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1830 163 7 3 chr5 74545361 74545655 -125084495 + AluSx SINE Alu 1 295 -17 22 0 0 0 chr5 74546756 74546778 -125083372 + AT_rich Low_complexity Low_complexity 1 22 0 1538 178 42 11 chr5 74547121 74547408 -125082742 - AluJo SINE Alu -16 296 1 198 0 0 0 chr5 74547590 74547612 -125082538 + (A)n Simple_repeat Simple_repeat 1 22 0 776 226 62 4 chr5 74549946 74550172 -125079978 - Charlie2 DNA MER1_type 0 2862 2624 749 217 28 51 chr5 74550257 74550411 -125079739 - MER101 LTR ERV1 0 474 325 1648 182 30 3 chr5 74550411 74550707 -125079443 + AluJo SINE Alu 1 304 -8 749 217 28 51 chr5 74550707 74550769 -125079381 - MER101 LTR ERV1 -149 325 263 1944 132 0 3 chr5 74550784 74551079 -125079071 - AluSx SINE Alu -18 294 1 2056 126 0 3 chr5 74551081 74551375 -125078775 - AluSx SINE Alu -19 293 1 731 94 19 0 chr5 74551444 74551550 -125078600 + HY1 scRNA scRNA 1 108 -4 222 250 0 0 chr5 74551551 74551599 -125078551 + A-rich Low_complexity Low_complexity 1 48 0 893 138 30 18 chr5 74551660 74551827 -125078323 - MER101 LTR ERV1 -296 178 10 1570 191 118 52 chr5 74552505 74553098 -125077052 - Charlie2 DNA MER1_type -304 2558 1927 4889 122 62 19 chr5 74553104 74553644 -125076506 - Tigger3b DNA MER2_type -1797 1231 716 1595 206 3 16 chr5 74553644 74553960 -125076190 + AluJb SINE Alu 1 312 0 4889 122 62 19 chr5 74553960 74553992 -125076158 - Tigger3b DNA MER2_type -2312 716 687 2232 84 7 0 chr5 74553992 74554278 -125075872 + AluSc SINE Alu 1 288 -21 4889 122 62 19 chr5 74554278 74554558 -125075592 - Tigger3b DNA MER2_type -2341 687 341 768 120 0 53 chr5 74554558 74554691 -125075459 - FLAM_C SINE Alu -4 139 14 1557 126 8 148 chr5 74554693 74554788 -125075362 - Tigger3b DNA MER2_type -885 346 239 4324 132 42 9 chr5 74554788 74555487 -125074663 + MER72 LTR ERV1 1 722 0 1557 126 8 148 chr5 74555487 74555763 -125074387 - Tigger3b DNA MER2_type -992 239 27 237 223 39 0 chr5 74555859 74555930 -125074220 - Charlie2 DNA MER1_type -2535 327 254 383 265 76 0 chr5 74555976 74556108 -125074042 - Charlie2 DNA MER1_type -2640 142 1 988 210 137 111 chr5 74556485 74556570 -125073580 - MER34B LTR ERV1 -12 553 472 27 0 0 0 chr5 74556570 74556597 -125073553 + AT_rich Low_complexity Low_complexity 1 27 0 1670 165 7 3 chr5 74556598 74556883 -125073267 - AluJb SINE Alu -26 286 1 988 210 137 111 chr5 74556883 74557308 -125072842 - MER34B LTR ERV1 -92 473 1 9449 192 36 46 chr5 74557313 74557453 -125072697 - L1MB3 LINE L1 -30 6389 6249 1582 147 13 70 chr5 74557453 74557767 -125072383 + AluJb SINE Alu 14 309 -3 9449 192 36 46 chr5 74557767 74558730 -125071420 - L1MB3 LINE L1 -170 6249 5278 2092 116 3 0 chr5 74558730 74559032 -125071118 + AluSx SINE Alu 5 307 -5 9449 192 36 46 chr5 74559032 74561340 -125068810 - L1MB3 LINE L1 -1141 5278 3006 1325 171 30 30 chr5 74561348 74561611 -125068539 - AluJo SINE Alu -16 296 34 3522 161 20 67 chr5 74561620 74562824 -125067326 - L1MB3 LINE L1 -3379 3003 1830 267 128 0 0 chr5 74562821 74562860 -125067290 - L1MB3 LINE L1 -5094 1290 1252 * 1300 182 12 25 chr5 74562859 74563101 -125067049 - L1MB3 LINE L1 -6141 243 5 1293 161 26 145 chr5 74563122 74563508 -125066642 + MER58B DNA MER1_type 1 340 -1 263 340 177 23 chr5 74563964 74564472 -125065678 - L2 LINE L2 -2017 1297 666 2698 122 21 23 chr5 74564472 74564905 -125065245 - MSTB1 LTR MaLR 0 432 1 263 340 177 23 chr5 74564905 74565047 -125065103 - L2 LINE L2 -2648 666 547 380 299 147 11 chr5 74565255 74565432 -125064718 + MIR SINE MIR 61 261 -1 618 250 31 19 chr5 74566733 74566893 -125063257 - MIR SINE MIR -53 209 48 1865 228 121 42 chr5 74568084 74568743 -125061407 + L2 LINE L2 2265 2975 -339 1870 195 184 11 chr5 74568764 74569236 -125060914 + MLT1F1 LTR MaLR 14 567 0 523 289 94 5 chr5 74569236 74569437 -125060713 + L2 LINE L2 2991 3209 -104 240 132 0 113 chr5 74570386 74570439 -125059711 + MIR SINE MIR 98 144 -64 25 31 0 0 chr5 74571839 74571871 -125058279 + GC_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 74571911 74571933 -125058217 + GC_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr5 74572108 74572151 -125057999 + GC_rich Low_complexity Low_complexity 1 43 0 431 230 40 10 chr5 74572809 74572909 -125057241 + Tigger7 DNA MER2_type 2389 2491 0 216 0 0 0 chr5 74573805 74573829 -125056321 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1731 137 26 0 chr5 74573832 74574103 -125056047 - AluJo SINE Alu -34 278 1 400 223 144 0 chr5 74575826 74575965 -125054185 + MIR3 SINE MIR 43 201 -7 22 56 0 0 chr5 74576574 74576610 -125053540 + AT_rich Low_complexity Low_complexity 1 36 0 679 249 17 91 chr5 74576640 74576881 -125053269 - MIR SINE MIR -1 261 39 196 178 164 41 chr5 74578632 74578705 -125051445 + L3 LINE CR1 864 945 -632 189 0 0 0 chr5 74578789 74578810 -125051340 + (TA)n Simple_repeat Simple_repeat 2 22 0 2023 100 0 28 chr5 74578833 74579147 -125051003 - AluSx SINE Alu 0 306 1 1842 149 0 13 chr5 74579147 74579447 -125050703 - AluJo SINE Alu -15 297 1 824 177 30 61 chr5 74579448 74579646 -125050504 - L1MB4 LINE L1 -45 6135 5944 1479 152 0 0 chr5 74580211 74580441 -125049709 + AluSq SINE Alu 2 231 -82 2557 123 50 0 chr5 74580441 74580977 -125049173 - MER51A LTR ERV1 0 634 1 483 125 0 0 chr5 74580977 74581049 -125049101 + AluS SINE Alu 227 298 -13 599 273 44 34 chr5 74582318 74582523 -125047627 - MIR SINE MIR -54 208 2 216 0 0 0 chr5 74582625 74582649 -125047501 + (TG)n Simple_repeat Simple_repeat 2 25 0 32 0 0 0 chr5 74583170 74583202 -125046948 + AT_rich Low_complexity Low_complexity 1 32 0 416 311 68 24 chr5 74583411 74583617 -125046533 - MIR SINE MIR -42 220 6 232 194 0 42 chr5 74583728 74583800 -125046350 + CT-rich Low_complexity Low_complexity 4 72 0 1549 157 4 11 chr5 74585016 74585283 -125044867 - AluJo SINE Alu -26 286 22 3824 173 55 11 chr5 74585351 74586090 -125044060 - L1MB5 LINE L1 -31 6143 5372 183 302 19 0 chr5 74586612 74586665 -125043485 - MER5A DNA MER1_type 0 189 136 2989 177 14 58 chr5 74588349 74588988 -125041162 - LTR9 LTR ERV1 -1 611 1 249 182 0 0 chr5 74590016 74590060 -125040090 + Tigger1 DNA MER2_type 1986 2029 -389 1861 125 54 0 chr5 74590089 74590368 -125039782 + AluSx SINE Alu 1 294 -18 303 311 22 67 chr5 74590402 74590537 -125039613 - L1MB4 LINE L1 -345 5776 5648 26 30 0 0 chr5 74590542 74590575 -125039575 + AT_rich Low_complexity Low_complexity 1 33 0 464 99 28 0 chr5 74590596 74590667 -125039483 + MLT2B1 LTR ERVL 1 73 -447 569 216 15 30 chr5 74590667 74590801 -125039349 + FLAM_A SINE Alu 11 142 0 1990 185 62 45 chr5 74590830 74591220 -125038930 + MLT2B2 LTR ERVL 60 461 -54 309 26 0 0 chr5 74591220 74591258 -125038892 + (CA)n Simple_repeat Simple_repeat 2 39 0 1990 185 62 45 chr5 74591258 74591315 -125038835 + MLT2B2 LTR ERVL 461 515 0 620 222 0 57 chr5 74591333 74591509 -125038641 - L1MC4 LINE L1 -150 7892 7727 957 149 31 0 chr5 74591510 74591671 -125038479 - AluSg/x SINE Alu -12 298 133 1632 132 106 7 chr5 74591702 74591975 -125038175 - AluSg SINE Alu -10 300 1 258 304 0 33 chr5 74592316 74592408 -125037742 - L1MC4 LINE L1 -753 7289 7201 1722 161 51 54 chr5 74592543 74592934 -125037216 - MLT1B LTR MaLR 0 390 1 788 239 185 54 chr5 74593062 74593390 -125036760 - L1MC4 LINE L1 -887 6921 6637 2607 119 40 21 chr5 74593390 74593810 -125036340 - MSTA LTR MaLR 0 428 1 788 239 185 54 chr5 74593810 74594292 -125035858 - L1MC4 LINE L1 -1171 6637 6047 212 86 29 0 chr5 74594299 74594334 -125035816 + (CA)n Simple_repeat Simple_repeat 2 37 0 2202 253 33 23 chr5 74594336 74594941 -125035209 - L1MC4 LINE L1 -1903 5905 5295 2151 213 75 35 chr5 74595620 74595834 -125034316 - MLT1F1 LTR MaLR 0 567 363 2317 158 3 6 chr5 74595834 74596200 -125033950 + MLT1A1 LTR MaLR 1 365 0 2151 213 75 35 chr5 74596200 74596530 -125033620 - MLT1F1 LTR MaLR -204 363 1 340 226 75 11 chr5 74596770 74596863 -125033287 - MER5A DNA MER1_type -47 142 44 374 291 31 0 chr5 74597141 74597268 -125032882 + L1MC5 LINE L1 7269 7399 -562 844 261 62 0 chr5 74597361 74597572 -125032578 + MER58A DNA MER1_type 1 224 0 904 308 70 52 chr5 74597598 74597932 -125032218 + L1ME1 LINE L1 38 364 -6032 1595 158 53 0 chr5 74597932 74598216 -125031934 + AluSx SINE Alu 1 299 -13 904 308 70 52 chr5 74598216 74598590 -125031560 + L1ME1 LINE L1 364 759 -5637 1729 162 3 19 chr5 74598594 74598902 -125031248 + AluJo SINE Alu 1 303 -9 227 152 65 0 chr5 74598940 74598986 -125031164 - L1M4 LINE L1 -2192 3954 3906 2899 216 140 45 chr5 74598989 74600112 -125030038 + L1ME1 LINE L1 4085 5100 -1135 1955 125 3 19 chr5 74600112 74600423 -125029727 + AluSq SINE Alu 1 306 -7 2899 216 140 45 chr5 74600423 74600480 -125029670 + L1ME1 LINE L1 5100 5150 -1085 432 0 0 0 chr5 74600480 74600528 -125029622 + (TA)n Simple_repeat Simple_repeat 2 49 0 2899 216 140 45 chr5 74600528 74601316 -125028834 + L1ME1 LINE L1 5150 6235 0 694 279 103 45 chr5 74601308 74601745 -125028405 + L1MC4 LINE L1 7489 8014 -28 * 2174 197 69 64 chr5 74604388 74604997 -125025153 - LTR9 LTR ERV1 0 612 1 526 261 0 0 chr5 74605476 74605587 -125024563 - MER81 DNA DNA -1 113 3 387 281 96 44 chr5 74605841 74605976 -125024174 + MIR3 SINE MIR 17 158 -50 497 96 29 29 chr5 74606099 74606203 -125023947 + CT-rich Low_complexity Low_complexity 2 105 0 653 242 171 0 chr5 74607915 74608126 -125022024 - MIR SINE MIR 0 262 16 234 0 0 0 chr5 74608146 74608172 -125021978 + (CA)n Simple_repeat Simple_repeat 1 26 0 260 208 16 144 chr5 74608226 74608335 -125021815 - MIR3 SINE MIR -3 205 112 1040 181 33 0 chr5 74608335 74608517 -125021633 - MER5A DNA MER1_type -1 188 1 260 208 16 144 chr5 74608517 74608532 -125021618 - MIR3 SINE MIR -96 112 97 1081 214 99 12 chr5 74608823 74609239 -125020911 + MLT1E2 LTR MaLR 136 549 0 2306 162 94 0 chr5 74609409 74609804 -125020346 - MSTB1 LTR MaLR 0 432 1 1681 174 13 17 chr5 74610155 74610453 -125019697 - AluJo SINE Alu -13 299 3 943 275 195 33 chr5 74612170 74612682 -125017468 + MLT1G1 LTR MaLR 1 595 0 641 284 59 72 chr5 74612772 74613229 -125016921 - L1MC4a LINE L1 -1887 5921 5471 2019 139 0 7 chr5 74613452 74613747 -125016403 - AluSx SINE Alu -19 293 1 22 35 0 0 chr5 74614252 74614281 -125015869 + AT_rich Low_complexity Low_complexity 1 29 0 495 84 0 0 chr5 74614296 74614367 -125015783 - AluSx SINE Alu 0 310 240 1455 115 0 5 chr5 74614369 74614569 -125015581 - AluSx SINE Alu -113 199 1 2286 117 0 22 chr5 74615083 74615400 -125014750 - AluSx SINE Alu -2 310 1 441 271 32 45 chr5 74616486 74616641 -125013509 - MER5A DNA MER1_type -1 188 36 1228 213 223 5 chr5 74617002 74617556 -125012594 - LTR50 LTR ERVL -4 625 2 2180 288 70 22 chr5 74617790 74618571 -125011579 - ERVL LTR ERVL -240 5524 4706 1190 320 20 14 chr5 74618583 74619023 -125011127 + LTR16A LTR ERVL 1 443 -7 4265 291 61 19 chr5 74619038 74620474 -125009676 - ERVL LTR ERVL -1076 4688 3193 277 106 0 43 chr5 74620478 74620525 -125009625 - MLT2B1 LTR ERVL -8 512 468 2634 150 22 24 chr5 74620526 74620885 -125009265 - LTR47A LTR ERVL 0 452 93 1676 42 0 0 chr5 74620885 74621078 -125009072 - L1PA4 LINE L1 -3 6152 5960 2634 150 22 24 chr5 74621078 74621171 -125008979 - LTR47A LTR ERVL -359 93 1 321 256 70 39 chr5 74621210 74621339 -125008811 - ERVL LTR ERVL -5279 485 353 1572 217 313 8 chr5 74621652 74622260 -125007890 - LTR50 LTR ERVL -2 793 1 256 325 0 0 chr5 74622279 74622362 -125007788 + MIR SINE MIR 170 252 -10 619 216 85 20 chr5 74622373 74622526 -125007624 - L1M4 LINE L1 -2236 3910 3748 1497 171 7 11 chr5 74624069 74624338 -125005812 + AluJo SINE Alu 45 312 0 258 259 19 139 chr5 74627470 74627628 -125002522 - L2 LINE L2 -1 3271 3133 2248 128 3 0 chr5 74628700 74629012 -125001138 - AluSp SINE Alu 0 313 1 1420 57 0 0 chr5 74629515 74629690 -125000460 - Tigger1 DNA MER2_type -1437 981 807 15742 121 19 15 chr5 74630128 74632391 -124997759 + Tigger1 DNA MER2_type 24 2300 -118 2089 113 14 0 chr5 74632391 74632673 -124997477 - AluSx SINE Alu -26 286 1 15742 121 19 15 chr5 74632673 74632792 -124997358 + Tigger1 DNA MER2_type 2300 2417 -1 1036 192 33 63 chr5 74632796 74633130 -124997020 - L1MC5 LINE L1 -87 7874 7551 1678 143 7 11 chr5 74634027 74634300 -124995850 + AluJb SINE Alu 28 299 -13 230 217 117 0 chr5 74634305 74634365 -124995785 + MIR3 SINE MIR 119 185 -23 1838 176 3 0 chr5 74634371 74634666 -124995484 - AluJb SINE Alu -16 296 1 2073 115 3 10 chr5 74634715 74635010 -124995140 - AluSx SINE Alu -19 293 1 2013 148 0 16 chr5 74635224 74635541 -124994609 - AluJb SINE Alu 0 312 1 2221 93 7 13 chr5 74636639 74636940 -124993210 - AluSq SINE Alu -14 299 1 24 0 0 0 chr5 74636952 74636976 -124993174 + AT_rich Low_complexity Low_complexity 1 24 0 547 232 38 103 chr5 74637047 74637232 -124992918 + MER5B DNA MER1_type 6 178 0 2141 134 0 13 chr5 74638527 74638841 -124991309 + AluSx SINE Alu 1 310 -2 1331 163 26 4 chr5 74639059 74639286 -124990864 - MER46A DNA MER2_type -4 232 1 1613 171 16 33 chr5 74641808 74642112 -124988038 - AluJo SINE Alu -13 299 1 353 324 14 14 chr5 74642130 74642272 -124987878 + L1MC4a LINE L1 5524 5665 -2143 240 35 0 0 chr5 74642278 74642307 -124987843 + (CA)n Simple_repeat Simple_repeat 2 30 0 222 267 0 17 chr5 74642316 74642376 -124987774 + (TA)n Simple_repeat Simple_repeat 2 60 0 349 256 163 6 chr5 74642403 74642563 -124987587 + L1MC4a LINE L1 5665 5849 -1959 1087 190 0 35 chr5 74642735 74642777 -124987373 - AluJo SINE Alu -11 301 259 2250 146 141 5 chr5 74642777 74643154 -124986996 + MSTA LTR MaLR 1 428 0 1087 190 0 35 chr5 74643154 74643337 -124986813 - AluJo SINE Alu -53 259 84 21 0 0 0 chr5 74643481 74643502 -124986648 + AT_rich Low_complexity Low_complexity 1 21 0 237 132 0 0 chr5 74643546 74643584 -124986566 + (T)n Simple_repeat Simple_repeat 1 38 0 2553 204 51 16 chr5 74643912 74644482 -124985668 - L1MD1 LINE L1 -1 6241 5652 1123 198 66 16 chr5 74644468 74644903 -124985247 - L1MDa LINE L1 -3748 2792 2341 * 354 235 8 84 chr5 74644893 74644939 -124985211 - L1MDa LINE L1 -5941 589 541 * 1696 180 0 20 chr5 74644939 74645245 -124984905 - AluJo SINE Alu -12 300 1 354 235 8 84 chr5 74645245 74645317 -124984833 - L1MDa LINE L1 -5989 541 480 508 205 119 94 chr5 74645931 74646175 -124983975 - L1MC4 LINE L1 0 8042 7793 827 203 35 50 chr5 74646210 74646471 -124983679 - L1MC4a LINE L1 -1755 6053 5797 1248 198 69 63 chr5 74646471 74646704 -124983446 + MER2 DNA MER2_type 2 232 -113 1517 175 10 32 chr5 74646704 74647012 -124983138 - AluJb SINE Alu -3 309 9 1248 198 69 63 chr5 74647012 74647047 -124983103 + MER2 DNA MER2_type 232 265 -80 1875 159 17 0 chr5 74647047 74647349 -124982801 + AluSx SINE Alu 2 308 -4 1248 198 69 63 chr5 74647349 74647413 -124982737 + MER2 DNA MER2_type 265 337 -8 1216 246 64 11 chr5 74647424 74647749 -124982401 - L1MC4a LINE L1 -2013 5795 5448 2873 3 0 0 chr5 74647749 74648054 -124982096 - AluY SINE Alu -6 305 1 1216 246 64 11 chr5 74648054 74648085 -124982065 - L1MC4a LINE L1 -2360 5448 5420 692 182 0 131 chr5 74649684 74649913 -124980237 + Charlie1a DNA MER1_type 1 199 -1256 1632 169 136 79 chr5 74649958 74650348 -124979802 + MLT1D LTR MaLR 23 444 -61 2178 13 0 0 chr5 74650348 74650585 -124979565 - AluYa5 SINE Alu 0 311 75 1632 169 136 79 chr5 74650585 74650651 -124979499 + MLT1D LTR MaLR 444 505 0 5812 189 43 31 chr5 74650652 74651895 -124978255 + Charlie1a DNA MER1_type 196 1453 -2 842 266 38 89 chr5 74651935 74652360 -124977790 + MLT1J LTR MaLR 100 502 -9 22 35 0 0 chr5 74652455 74652484 -124977666 + AT_rich Low_complexity Low_complexity 1 29 0 1734 112 158 4 chr5 74652511 74652771 -124977379 - AluSx SINE Alu -1 301 2 28 29 0 0 chr5 74654131 74654166 -124975984 + AT_rich Low_complexity Low_complexity 1 35 0 1929 152 0 3 chr5 74654353 74654650 -124975500 + AluSx SINE Alu 1 296 -16 947 247 99 14 chr5 74654824 74655171 -124974979 - MLT1J2 LTR MaLR -50 396 3 26 0 0 0 chr5 74655301 74655327 -124974823 + AT_rich Low_complexity Low_complexity 1 26 0 254 196 71 0 chr5 74655414 74655470 -124974680 - MLT1L LTR MaLR -2 613 554 2224 137 9 18 chr5 74655470 74655812 -124974338 - MER1B DNA MER1_type 0 339 1 225 308 124 35 chr5 74655884 74656053 -124974097 - MLT1L LTR MaLR -221 394 211 412 259 116 58 chr5 74656294 74656613 -124973537 + L1MC4a LINE L1 5539 5727 -394 2149 102 31 17 chr5 74656642 74656936 -124973214 + AluSx SINE Alu 1 298 -14 203 0 37 0 chr5 74657216 74657243 -124972907 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1862 163 7 3 chr5 74657398 74657693 -124972457 + AluSx SINE Alu 1 296 -16 229 152 0 0 chr5 74658377 74658410 -124971740 + Tigger3b DNA MER2_type 31 63 -1168 22 0 0 0 chr5 74658793 74658815 -124971335 + AT_rich Low_complexity Low_complexity 1 22 0 1560 178 42 11 chr5 74659158 74659445 -124970705 - AluJo SINE Alu -16 296 1 207 0 0 0 chr5 74659627 74659650 -124970500 + (A)n Simple_repeat Simple_repeat 1 23 0 796 226 62 4 chr5 74661989 74662215 -124967935 - Charlie2 DNA MER1_type 0 2862 2624 743 222 28 51 chr5 74662300 74662454 -124967696 - MER101 LTR ERV1 0 474 325 1666 182 30 3 chr5 74662454 74662750 -124967400 + AluJo SINE Alu 1 304 -8 743 222 28 51 chr5 74662750 74662811 -124967339 - MER101 LTR ERV1 -149 325 264 1980 142 0 3 chr5 74662811 74663122 -124967028 - AluSx SINE Alu -2 310 1 2096 126 0 3 chr5 74663124 74663418 -124966732 - AluSx SINE Alu -19 293 1 745 94 19 0 chr5 74663487 74663593 -124966557 + HY1 scRNA scRNA 1 108 -4 231 245 0 0 chr5 74663594 74663643 -124966507 + A-rich Low_complexity Low_complexity 1 49 0 916 138 30 18 chr5 74663704 74663871 -124966279 - MER101 LTR ERV1 -296 178 10 1649 187 118 52 chr5 74664548 74665141 -124965009 - Charlie2 DNA MER1_type -304 2558 1927 5002 121 63 19 chr5 74665147 74665687 -124964463 - Tigger3b DNA MER2_type -1797 1231 716 1606 206 3 16 chr5 74665687 74666003 -124964147 + AluJb SINE Alu 1 312 0 5002 121 63 19 chr5 74666003 74666035 -124964115 - Tigger3b DNA MER2_type -2312 716 687 2273 84 7 0 chr5 74666035 74666321 -124963829 + AluSc SINE Alu 1 288 -21 5002 121 63 19 chr5 74666321 74666600 -124963550 - Tigger3b DNA MER2_type -2341 687 341 779 120 0 53 chr5 74666600 74666733 -124963417 - FLAM_C SINE Alu -4 139 14 1608 124 8 148 chr5 74666735 74666830 -124963320 - Tigger3b DNA MER2_type -885 346 239 4481 130 40 9 chr5 74666830 74667530 -124962620 + MER72 LTR ERV1 1 722 0 1608 124 8 148 chr5 74667530 74667806 -124962344 - Tigger3b DNA MER2_type -992 239 27 228 241 0 0 chr5 74667842 74667896 -124962254 - Charlie2 DNA MER1_type -941 1921 1868 235 208 38 0 chr5 74667902 74667955 -124962195 - Charlie2 DNA MER1_type -2455 327 273 376 265 76 0 chr5 74668019 74668151 -124961999 - Charlie2 DNA MER1_type -2640 142 1 1016 210 137 111 chr5 74668528 74668641 -124961509 - MER34B LTR ERV1 -12 553 444 1786 165 7 3 chr5 74668641 74668926 -124961224 - AluJb SINE Alu -26 286 1 1016 210 137 111 chr5 74668926 74669351 -124960799 - MER34B LTR ERV1 -121 444 1 9510 193 37 46 chr5 74669356 74669496 -124960654 - L1MB3 LINE L1 -30 6389 6249 1671 151 13 67 chr5 74669496 74669808 -124960342 + AluJb SINE Alu 14 308 -4 9510 193 37 46 chr5 74669808 74670771 -124959379 - L1MB3 LINE L1 -170 6249 5279 2171 126 3 0 chr5 74670771 74671073 -124959077 + AluSx SINE Alu 5 307 -5 9510 193 37 46 chr5 74671073 74673378 -124956772 - L1MB3 LINE L1 -1140 5279 3006 1400 175 30 30 chr5 74673386 74673649 -124956501 - AluJo SINE Alu -16 296 34 3540 159 20 68 chr5 74673658 74674864 -124955286 - L1MB3 LINE L1 -3379 3003 1830 269 128 0 0 chr5 74674861 74674900 -124955250 - L1MB3 LINE L1 -5094 1290 1252 * 1286 186 12 25 chr5 74674899 74675141 -124955009 - L1MB3 LINE L1 -6141 243 5 1328 158 26 145 chr5 74675162 74675548 -124954602 + MER58B DNA MER1_type 1 340 -1 2710 120 21 23 chr5 74676512 74676945 -124953205 - MSTB1 LTR MaLR 0 432 1 295 299 147 11 chr5 74677295 74677472 -124952678 + MIR SINE MIR 61 261 -1 549 250 31 19 chr5 74678775 74678935 -124951215 - MIR SINE MIR -53 209 48 1628 231 121 42 chr5 74680126 74680785 -124949365 + L2 LINE L2 2265 2975 -339 1838 193 184 11 chr5 74680806 74681278 -124948872 + MLT1F1 LTR MaLR 14 567 0 444 289 94 5 chr5 74681278 74681479 -124948671 + L2 LINE L2 2991 3209 -104 218 132 0 113 chr5 74682435 74682488 -124947662 + MIR SINE MIR 98 144 -64 22 0 0 0 chr5 74683888 74683910 -124946240 + GC_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 74683960 74683982 -124946168 + GC_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr5 74684157 74684200 -124945950 + GC_rich Low_complexity Low_complexity 1 43 0 433 230 40 10 chr5 74684858 74684958 -124945192 + Tigger7 DNA MER2_type 2385 2487 0 216 0 0 0 chr5 74685854 74685878 -124944272 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1806 143 26 0 chr5 74685879 74686152 -124943998 - AluJo SINE Alu -32 280 1 352 216 144 0 chr5 74687875 74688014 -124942136 + MIR3 SINE MIR 43 201 -7 22 56 0 0 chr5 74688623 74688659 -124941491 + AT_rich Low_complexity Low_complexity 1 36 0 580 249 17 91 chr5 74688689 74688930 -124941220 - MIR SINE MIR -1 261 39 799 187 29 75 chr5 74690816 74690836 -124939314 - L1MB4 LINE L1 -9 6162 6143 243 0 0 0 chr5 74690836 74690863 -124939287 + (TA)n Simple_repeat Simple_repeat 2 28 0 799 187 29 75 chr5 74690863 74690886 -124939264 - L1MB4 LINE L1 -28 6143 6120 2133 104 0 28 chr5 74690886 74691200 -124938950 - AluSx SINE Alu 0 306 1 1963 149 0 13 chr5 74691200 74691500 -124938650 - AluJo SINE Alu -15 297 1 799 187 29 75 chr5 74691500 74691701 -124938449 - L1MB4 LINE L1 -49 6122 5943 1572 152 0 0 chr5 74692269 74692499 -124937651 + AluSq SINE Alu 2 231 -82 2538 122 50 0 chr5 74692499 74693030 -124937120 - MER51A LTR ERV1 0 634 6 429 147 0 0 chr5 74693039 74693107 -124937043 + AluS SINE Alu 231 298 -13 575 270 46 25 chr5 74694378 74694574 -124935576 - MIR SINE MIR -54 208 9 200 97 32 0 chr5 74694687 74694718 -124935432 + (TG)n Simple_repeat Simple_repeat 2 33 0 32 0 0 0 chr5 74695228 74695260 -124934890 + AT_rich Low_complexity Low_complexity 1 32 0 354 312 43 0 chr5 74695511 74695649 -124934501 - MIR SINE MIR -87 175 32 232 194 0 42 chr5 74695786 74695858 -124934292 + CT-rich Low_complexity Low_complexity 4 72 0 1622 162 8 8 chr5 74697077 74697342 -124932808 - AluJo SINE Alu -26 286 22 3812 173 55 12 chr5 74697410 74698150 -124932000 - L1MB5 LINE L1 -31 6143 5372 2981 177 14 58 chr5 74700408 74701047 -124929103 - LTR9 LTR ERV1 -1 611 1 360 0 0 0 chr5 74701826 74701866 -124928284 + (TG)n Simple_repeat Simple_repeat 2 41 0 252 182 0 0 chr5 74702097 74702141 -124928009 + Tigger1 DNA MER2_type 1986 2029 -389 1884 131 57 3 chr5 74702170 74702452 -124927698 + AluSx SINE Alu 1 297 -15 26 30 0 0 chr5 74702626 74702659 -124927491 + AT_rich Low_complexity Low_complexity 1 33 0 423 127 28 0 chr5 74702680 74702751 -124927399 + MLT2B2 LTR ERVL 1 73 -447 569 216 15 30 chr5 74702751 74702885 -124927265 + FLAM_A SINE Alu 11 142 0 1983 174 65 47 chr5 74702914 74703304 -124926846 + MLT2B2 LTR ERVL 60 460 -55 324 0 0 0 chr5 74703304 74703340 -124926810 + (CA)n Simple_repeat Simple_repeat 2 37 0 1983 174 65 47 chr5 74703340 74703397 -124926753 + MLT2B2 LTR ERVL 460 515 0 630 222 0 57 chr5 74703415 74703591 -124926559 - L1MC4 LINE L1 -150 7892 7727 986 140 0 0 chr5 74703610 74703753 -124926397 - AluSg/x SINE Alu -35 277 135 1745 132 106 7 chr5 74703784 74704057 -124926093 - AluSg SINE Alu -10 300 1 253 304 0 33 chr5 74704398 74704490 -124925660 - L1MC4 LINE L1 -753 7289 7201 1741 159 51 54 chr5 74704625 74705016 -124925134 - MLT1B LTR MaLR 0 390 1 812 235 185 54 chr5 74705144 74705472 -124924678 - L1MC4 LINE L1 -887 6921 6637 2517 122 45 21 chr5 74705472 74705890 -124924260 - MSTA LTR MaLR 0 428 1 812 235 185 54 chr5 74705890 74706372 -124923778 - L1MC4 LINE L1 -1171 6637 6047 212 86 29 0 chr5 74706381 74706416 -124923734 + (CA)n Simple_repeat Simple_repeat 2 37 0 2205 250 35 23 chr5 74706418 74707022 -124923128 - L1MC4 LINE L1 -1903 5905 5295 2126 213 75 35 chr5 74707701 74707915 -124922235 - MLT1F1 LTR MaLR 0 567 363 2315 158 3 6 chr5 74707915 74708281 -124921869 + MLT1A1 LTR MaLR 1 365 0 2126 213 75 35 chr5 74708281 74708611 -124921539 - MLT1F1 LTR MaLR -204 363 1 326 234 64 11 chr5 74708851 74708945 -124921205 - MER5A DNA MER1_type -47 142 44 381 291 31 0 chr5 74709223 74709350 -124920800 + L1MC5 LINE L1 7269 7399 -562 866 256 62 0 chr5 74709443 74709654 -124920496 + MER58A DNA MER1_type 1 224 0 511 334 76 9 chr5 74709680 74710009 -124920141 + L1MEc LINE L1 38 388 -6008 1678 152 47 0 chr5 74710014 74710290 -124919860 + AluSx SINE Alu 1 289 -23 1996 100 0 4 chr5 74810364 74810623 -124819527 - AluY SINE Alu -53 258 1 2450 81 7 0 chr5 74810624 74810932 -124819218 - AluSq SINE Alu -3 310 1 843 218 6 29 chr5 74811006 74811176 -124818974 - AluJo SINE Alu -21 291 126 287 308 115 0 chr5 74811387 74811491 -124818659 - L2 LINE L2 0 3272 3157 286 293 18 44 chr5 74811530 74811691 -124818459 - MER5A DNA MER1_type -22 167 1 227 149 21 21 chr5 74811700 74811747 -124818403 - Charlie7 DNA MER1_type -1 2611 2565 1978 129 0 11 chr5 74811774 74812061 -124818089 + AluSx SINE Alu 1 284 -28 27 0 0 0 chr5 74812061 74812088 -124818062 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr5 74814363 74814385 -124815765 + AT_rich Low_complexity Low_complexity 1 22 0 336 273 155 21 chr5 74814750 74814944 -124815206 - MLT1I LTR MaLR -26 383 164 422 235 0 0 chr5 74814991 74815072 -124815078 - MER5A DNA MER1_type -100 89 9 350 241 98 23 chr5 74815521 74815654 -124814496 - MLT1I LTR MaLR -164 245 103 301 341 65 0 chr5 74815840 74815963 -124814187 - MIR SINE MIR -62 146 16 249 152 0 0 chr5 74816314 74816360 -124813790 + LTR66 LTR ERVL 394 439 -171 440 153 12 0 chr5 74816360 74816445 -124813705 + (TA)n Simple_repeat Simple_repeat 2 87 0 211 211 35 18 chr5 74818373 74818430 -124811720 + GA-rich Low_complexity Low_complexity 3 60 0 2078 91 29 0 chr5 74819176 74819473 -124810677 - AluSq SINE Alu 0 305 1 447 256 144 11 chr5 74820308 74820488 -124809662 - LTR16B LTR ERVL 0 464 261 2018 105 14 17 chr5 74820489 74820783 -124809367 - AluSx SINE Alu -19 293 1 843 218 6 29 chr5 74820857 74821027 -124809123 - AluJo SINE Alu -21 291 126 287 308 115 0 chr5 74821238 74821342 -124808808 - L2 LINE L2 0 3272 3157 286 293 18 44 chr5 74821381 74821542 -124808608 - MER5A DNA MER1_type -22 167 1 227 149 21 21 chr5 74821551 74821598 -124808552 - Charlie7 DNA MER1_type -1 2611 2565 2191 108 0 3 chr5 74821625 74821913 -124808237 + AluSx SINE Alu 1 287 -25 28 0 0 0 chr5 74821913 74821941 -124808209 + AT_rich Low_complexity Low_complexity 1 28 0 234 124 78 116 chr5 74821954 74822083 -124808067 - Charlie7 DNA MER1_type -76 2536 2413 226 203 0 72 chr5 74822057 74822126 -124808024 - Charlie7 DNA MER1_type -2507 105 42 * 2221 95 0 0 chr5 74822210 74822523 -124807627 - AluY SINE Alu 0 313 1 1018 101 20 20 chr5 74822689 74822837 -124807313 - MSTD LTR MaLR 0 396 249 378 133 33 0 chr5 74822827 74822887 -124807263 - MSTD LTR MaLR -334 62 1 * 348 188 0 0 chr5 74823189 74823258 -124806892 + (CA)n Simple_repeat Simple_repeat 2 70 0 452 249 29 0 chr5 74823666 74823795 -124806355 - MIR SINE MIR -64 144 40 1630 217 16 40 chr5 74824290 74824664 -124805486 + MLT1A1 LTR MaLR 1 365 0 359 262 71 0 chr5 74825003 74825087 -124805063 - MIR3 SINE MIR -33 175 86 2309 109 3 0 chr5 74825495 74825797 -124804353 + AluSq SINE Alu 1 303 -10 294 315 26 18 chr5 74825860 74825985 -124804165 + MIR SINE MIR 33 157 -64 2186 113 7 3 chr5 74826035 74826326 -124803824 + AluSx SINE Alu 1 292 -20 996 173 51 57 chr5 74827033 74827060 -124803090 - MER31B LTR ERV1 0 466 440 2792 142 29 2 chr5 74827060 74827475 -124802675 - MSTB LTR MaLR 0 426 1 996 173 51 57 chr5 74827475 74827802 -124802348 - MER31B LTR ERV1 -26 440 1 297 269 130 0 chr5 74828030 74828138 -124802012 - MIR SINE MIR -55 207 86 2277 104 7 0 chr5 74828194 74828493 -124801657 - AluSp SINE Alu -12 301 1 2308 109 0 0 chr5 74829808 74830110 -124800040 + AluSx SINE Alu 1 302 -10 450 355 54 9 chr5 74830114 74830449 -124799701 + HAL1 LINE L1 162 511 -1996 3970 224 89 66 chr5 74830569 74830808 -124799342 + HAL1 LINE L1 775 1007 -1500 2343 90 6 0 chr5 74830808 74831119 -124799031 + AluSq SINE Alu 1 313 0 3970 224 89 66 chr5 74831119 74832567 -124797583 + HAL1 LINE L1 1007 2502 -5 3229 136 22 80 chr5 74833385 74833645 -124796505 + LTR59 LTR ERV1 1 274 -323 1684 155 0 15 chr5 74833645 74833909 -124796241 + AluJo SINE Alu 36 295 -17 3229 136 22 80 chr5 74833909 74834274 -124795876 + LTR59 LTR ERV1 274 590 -7 1591 135 21 84 chr5 74834415 74834749 -124795401 + MER4A LTR ERV1 1 313 -351 853 238 29 120 chr5 74834876 74835153 -124794997 + MER41E LTR ERV1 166 400 -112 934 128 0 57 chr5 74835153 74835294 -124794856 - FLAM_C SINE Alu 0 133 1 853 238 29 120 chr5 74835294 74835398 -124794752 + MER41E LTR ERV1 400 512 0 844 168 37 86 chr5 74835410 74835656 -124794494 + MER4C LTR ERV1 276 417 -48 1871 129 58 89 chr5 74835656 74836004 -124794146 - MER1B DNA MER1_type 0 337 1 844 168 37 86 chr5 74836004 74836033 -124794117 + MER4C LTR ERV1 417 446 -19 2925 124 53 19 chr5 74836040 74836127 -124794023 + LTR29 LTR ERV1 132 215 -407 224 30 30 0 chr5 74836127 74836160 -124793990 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2925 124 53 19 chr5 74836160 74836384 -124793766 + LTR29 LTR ERV1 215 467 -155 4070 169 37 41 chr5 74836384 74836801 -124793349 + MER4E LTR ERV1 1 415 -364 2237 107 0 0 chr5 74836801 74837091 -124793059 + AluSq SINE Alu 1 290 -23 4070 169 37 41 chr5 74837091 74837455 -124792695 + MER4E LTR ERV1 415 779 0 2925 124 53 19 chr5 74837455 74837617 -124792533 + LTR29 LTR ERV1 467 622 0 4473 136 69 6 chr5 74837717 74838396 -124791754 - MER72 LTR ERV1 0 722 1 313 290 160 15 chr5 74838402 74838533 -124791617 + MER76 LTR ERV 507 656 -32 1829 201 37 66 chr5 74839253 74839428 -124790722 + MLT1D LTR MaLR 3 182 -323 2430 80 3 0 chr5 74839428 74839729 -124790421 - AluSp SINE Alu -11 302 1 1829 201 37 66 chr5 74839729 74840066 -124790084 + MLT1D LTR MaLR 182 500 -5 927 170 18 36 chr5 74840195 74840360 -124789790 + AluJo SINE Alu 1 162 -150 671 39 0 0 chr5 74840360 74840437 -124789713 - AluS SINE Alu -234 78 2 399 183 75 43 chr5 74840485 74840578 -124789572 - HsTC2 DNA Tc2 -1775 123 28 245 224 187 65 chr5 74840984 74841091 -124789059 + MIR SINE MIR 22 141 -121 2158 125 7 0 chr5 74841170 74841465 -124788685 - AluSq SINE Alu -16 297 1 2242 116 3 3 chr5 74841465 74841775 -124788375 - AluSx SINE Alu -2 310 1 1823 178 0 10 chr5 74841911 74842220 -124787930 + AluJb SINE Alu 1 306 -6 1864 163 7 0 chr5 74842766 74843061 -124787089 - AluSx SINE Alu -15 297 1 214 48 0 71 chr5 74843988 74844030 -124786120 + (GGGA)n Simple_repeat Simple_repeat 4 42 0 206 250 0 15 chr5 74844381 74844449 -124785701 + GA-rich Low_complexity Low_complexity 2 68 0 293 264 136 0 chr5 74844561 74844671 -124785479 - LTR67 LTR ERVL 0 557 433 392 321 101 6 chr5 74844767 74844926 -124785224 - LTR67 LTR ERVL -269 288 115 495 0 0 0 chr5 74845109 74845164 -124784986 + (CA)n Simple_repeat Simple_repeat 2 56 0 227 235 20 0 chr5 74845924 74845975 -124784175 + MLT1K LTR MaLR 177 228 -360 351 0 0 0 chr5 74845981 74846020 -124784130 + (TG)n Simple_repeat Simple_repeat 1 39 0 462 114 0 0 chr5 74846020 74846099 -124784051 + (GA)n Simple_repeat Simple_repeat 2 80 0 322 241 161 40 chr5 74846200 74846329 -124783821 + MLT1K LTR MaLR 376 533 -55 1593 162 19 42 chr5 74846329 74846509 -124783641 - AluJb SINE Alu -10 302 130 2249 100 3 25 chr5 74846509 74846829 -124783321 + AluSq SINE Alu 1 313 0 1593 162 19 42 chr5 74846829 74846957 -124783193 - AluJb SINE Alu -182 130 1 322 241 161 40 chr5 74846957 74847001 -124783149 + MLT1K LTR MaLR 533 570 -18 616 282 147 48 chr5 74847123 74847542 -124782608 + L1MC/D LINE L1 5267 5724 -2072 475 256 15 23 chr5 74847639 74847772 -124782378 + LTR29 LTR ERV1 127 258 -364 186 209 60 75 chr5 74847828 74847895 -124782255 + L3 LINE CR1 1390 1455 -122 602 253 54 0 chr5 74848703 74848869 -124781281 + MER5B DNA MER1_type 1 175 -3 376 265 20 0 chr5 74849094 74849196 -124780954 + L2 LINE L2 3169 3272 0 26 0 0 67 chr5 74849390 74849413 -124780737 + AT_rich Low_complexity Low_complexity 1 21 -21 2175 58 0 0 chr5 74849413 74849670 -124780480 - AluY SINE Alu 0 311 55 26 0 0 67 chr5 74849670 74849691 -124780459 + AT_rich Low_complexity Low_complexity 21 42 0 1657 185 3 26 chr5 74850464 74850631 -124779519 - AluJo SINE Alu -16 296 138 2536 60 0 10 chr5 74850631 74850945 -124779205 - AluY SINE Alu 0 311 1 1657 185 3 26 chr5 74850945 74851080 -124779070 - AluJo SINE Alu -174 138 1 577 191 133 70 chr5 74851750 74851817 -124778333 + LTR37B LTR ERV1 51 112 -356 2260 122 0 0 chr5 74851817 74852121 -124778029 - AluSx SINE Alu -8 304 1 577 191 133 70 chr5 74852121 74852294 -124777856 + LTR37B LTR ERV1 112 306 -162 571 167 109 36 chr5 74853632 74853770 -124776380 + LTR37B LTR ERV1 313 460 -8 1197 188 47 8 chr5 74854290 74854524 -124775626 - MLT2B3 LTR ERVL 0 554 312 1799 129 18 25 chr5 74854855 74855133 -124775017 - AluSx SINE Alu -36 276 1 21 0 0 0 chr5 74855918 74855939 -124774211 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 74856154 74856177 -124773973 + AT_rich Low_complexity Low_complexity 1 23 0 2083 108 24 0 chr5 74857341 74857638 -124772512 - AluSx SINE Alu -8 304 1 1136 166 0 0 chr5 74858157 74858332 -124771818 - FRAM SINE Alu 0 176 2 215 233 117 29 chr5 74858715 74858818 -124771332 + L2 LINE L2 2955 3066 -206 407 283 0 10 chr5 74859421 74859520 -124770630 + MIR SINE MIR 16 113 -95 455 321 74 34 chr5 74859958 74860282 -124769868 + L1MC4a LINE L1 4903 5239 -907 551 291 44 32 chr5 74860383 74860634 -124769516 + L1MC4a LINE L1 5412 5665 -2143 237 248 110 35 chr5 74860694 74860839 -124769311 + L1MC4a LINE L1 5779 5934 -1874 198 0 0 0 chr5 74860979 74861001 -124769149 + (T)n Simple_repeat Simple_repeat 1 22 0 2032 112 0 0 chr5 74861362 74861629 -124768521 + AluSx SINE Alu 1 267 -45 763 146 0 23 chr5 74861717 74861847 -124768303 - FLAM_C SINE Alu -6 127 1 1893 142 14 7 chr5 74862099 74862400 -124767750 - AluJb SINE Alu 0 303 1 235 287 186 16 chr5 74862412 74862541 -124767609 + MIR3 SINE MIR 48 198 -10 22 56 0 0 chr5 74863194 74863230 -124766920 + AT_rich Low_complexity Low_complexity 1 36 0 1696 170 11 28 chr5 74863347 74863630 -124766520 - AluJo SINE Alu -34 278 1 2728 126 24 50 chr5 74863736 74863925 -124766225 - L1MA7 LINE L1 -1 6290 6098 1756 153 0 77 chr5 74863925 74864252 -124765898 - AluJb SINE Alu -10 302 1 2728 126 24 50 chr5 74864252 74864603 -124765547 - L1MA7 LINE L1 -193 6098 5764 2314 81 3 3 chr5 74865051 74865347 -124764803 + AluSx SINE Alu 1 296 -16 2256 127 0 0 chr5 74865575 74865883 -124764267 - AluSx SINE Alu -4 308 1 615 231 72 10 chr5 74866664 74866850 -124763300 + MIR SINE MIR 16 209 -53 212 337 153 0 chr5 74867967 74868065 -124762085 + L2 LINE L2 3150 3262 -10 274 273 73 60 chr5 74868120 74868270 -124761880 + MIR3 SINE MIR 45 196 -12 23 0 0 0 chr5 74869086 74869109 -124761041 + AT_rich Low_complexity Low_complexity 1 23 0 248 320 20 59 chr5 74869747 74869900 -124760250 - L2 LINE L2 -749 2565 2419 338 277 0 36 chr5 74869912 74869995 -124760155 + L2 LINE L2 3166 3245 -27 24 32 0 0 chr5 74870785 74870816 -124759334 + AT_rich Low_complexity Low_complexity 1 31 0 331 286 180 10 chr5 74871260 74871466 -124758684 + L1MC4a LINE L1 5680 5920 -1888 1805 151 7 14 chr5 74873400 74873692 -124756458 - AluJb SINE Alu -22 290 1 369 254 219 24 chr5 74874421 74874626 -124755524 - MIR SINE MIR -12 250 6 837 119 0 70 chr5 74875211 74875354 -124754796 + FLAM_C SINE Alu 1 133 0 317 241 147 17 chr5 74875420 74875536 -124754614 + MIR3 SINE MIR 30 160 -48 22 56 0 0 chr5 74875741 74875777 -124754373 + AT_rich Low_complexity Low_complexity 1 36 0 250 233 83 0 chr5 74875819 74875879 -124754271 - MIR SINE MIR -53 209 145 21 36 0 0 chr5 74876188 74876216 -124753934 + AT_rich Low_complexity Low_complexity 1 28 0 2338 93 3 0 chr5 74876351 74876652 -124753498 - AluSg SINE Alu -8 302 1 2128 130 0 0 chr5 74876805 74877104 -124753046 - AluSx SINE Alu -13 299 1 2156 119 10 0 chr5 74877135 74877429 -124752721 - AluSx SINE Alu -15 297 1 30 27 0 0 chr5 74877471 74877508 -124752642 + AT_rich Low_complexity Low_complexity 1 37 0 1713 178 14 3 chr5 74877601 74877887 -124752263 + AluJo SINE Alu 6 294 -18 478 157 0 0 chr5 74877923 74878006 -124752144 - Charlie5 DNA MER1_type -2505 107 25 1882 146 7 0 chr5 74878047 74878342 -124751808 - AluJb SINE Alu -15 297 1 839 108 29 0 chr5 74878473 74878612 -124751538 + MER2 DNA MER2_type 64 206 -139 320 239 15 0 chr5 74878640 74878707 -124751443 + MER2 DNA MER2_type 278 345 0 878 200 57 24 chr5 74878868 74879078 -124751072 + MER20 DNA MER1_type 3 219 0 779 159 0 43 chr5 74879114 74879252 -124750898 - FLAM_C SINE Alu 0 133 2 2217 99 7 10 chr5 74879276 74879580 -124750570 - AluSp SINE Alu -10 303 1 2075 142 0 13 chr5 74879646 74879962 -124750188 - AluSx SINE Alu 0 312 1 2286 105 7 0 chr5 74880034 74880329 -124749821 - AluSq SINE Alu -16 297 1 191 365 71 16 chr5 74881808 74881934 -124748216 - MIR SINE MIR -55 207 75 2042 135 14 3 chr5 74884671 74884967 -124745183 - AluSx SINE Alu -13 299 1 200 313 88 0 chr5 74885704 74885784 -124744366 - MIR SINE MIR -60 202 116 1617 191 3 16 chr5 74885989 74886304 -124743846 - AluJo SINE Alu 0 312 2 764 268 197 18 chr5 74887180 74887565 -124742585 - L2 LINE L2 -17 3296 2843 323 273 40 0 chr5 74887578 74887677 -124742473 - L2 LINE L2 -1498 1816 1714 938 206 62 20 chr5 74887677 74887983 -124742167 - L1ME1 LINE L1 0 6166 5848 791 222 108 62 chr5 74887996 74888366 -124741784 - L2 LINE L2 -1615 1699 1313 586 309 68 5 chr5 74888374 74888565 -124741585 + MIR SINE MIR 16 218 -44 492 109 98 0 chr5 74888588 74888680 -124741470 - HY1 scRNA scRNA -11 101 1 2002 262 256 19 chr5 74888694 74889736 -124740414 - L2 LINE L2 -1997 1317 29 1986 148 3 13 chr5 74890610 74890921 -124739229 - AluJb SINE Alu -4 308 1 728 172 7 26 chr5 74890944 74891095 -124739055 - MER3 DNA MER1_type -57 152 5 1731 190 118 55 chr5 74892913 74893386 -124736764 - MLT2B2 LTR ERVL -12 503 1 592 296 36 7 chr5 74893972 74894249 -124735901 - L1MC4a LINE L1 -1883 5925 5641 635 253 7 20 chr5 74894435 74894581 -124735569 - MIR SINE MIR -107 155 12 4384 154 67 18 chr5 74895113 74895211 -124734939 - L1MA4 LINE L1 -1 6299 6207 1718 178 0 26 chr5 74895211 74895514 -124734636 - AluJo SINE Alu -16 296 2 4384 154 67 18 chr5 74895514 74896347 -124733803 - L1MA4 LINE L1 -93 6207 5416 243 0 0 0 chr5 74896347 74896374 -124733776 + (ATG)n Simple_repeat Simple_repeat 2 28 0 4384 154 67 18 chr5 74896374 74897232 -124732918 - L1MA4 LINE L1 -884 5416 4434 435 252 50 8 chr5 74897286 74897405 -124732745 + MIR SINE MIR 79 202 -60 1952 145 6 10 chr5 74897686 74897997 -124732153 + AluJb SINE Alu 1 310 -2 1556 139 68 0 chr5 74898234 74898471 -124731679 + AluSx SINE Alu 1 253 -59 225 154 0 0 chr5 74898482 74898521 -124731629 + (CA)n Simple_repeat Simple_repeat 2 40 0 300 140 40 0 chr5 74898527 74898577 -124731573 - L1MC4 LINE L1 -1339 6703 6652 1081 122 0 0 chr5 74898714 74898862 -124731288 - AluSg/x SINE Alu -14 298 151 2094 120 0 13 chr5 74899067 74899366 -124730784 - AluSq SINE Alu -18 295 1 388 296 61 0 chr5 74899754 74899869 -124730281 - MIR SINE MIR -1 261 140 390 335 90 28 chr5 74899916 74900271 -124729879 + L1M4 LINE L1 3271 3647 -2499 1076 272 24 30 chr5 74900461 74900792 -124729358 + MLT1I LTR MaLR 81 409 0 318 305 92 15 chr5 74900809 74900940 -124729210 + L1M4 LINE L1 3689 3829 -2317 2068 134 10 0 chr5 74901617 74901923 -124728227 + AluSx SINE Alu 3 311 -1 668 211 0 0 chr5 74902159 74902282 -124727868 - MER5C DNA MER1_type -200 124 2 243 302 198 0 chr5 74902287 74902383 -124727767 - L2 LINE L2 -1032 2282 2168 2192 115 0 3 chr5 74902440 74902745 -124727405 - AluSx SINE Alu -8 304 1 807 184 25 15 chr5 74902745 74902946 -124727204 + L1MA4 LINE L1 6093 6295 -5 205 224 90 0 chr5 74902987 74903054 -124727096 - L2 LINE L2 -1317 1997 1925 359 303 81 73 chr5 74903054 74903288 -124726862 + L1MEd LINE L1 146 381 -5738 2156 96 3 7 chr5 74903339 74903657 -124726493 - AluSx SINE Alu 0 317 1 2250 148 23 0 chr5 74903928 74904319 -124725831 - L1MC2 LINE L1 -431 5913 5514 4323 219 25 17 chr5 74904326 74905538 -124724612 - L1MC2 LINE L1 -866 5280 4060 228 236 0 36 chr5 74905535 74905590 -124724560 + L1M4 LINE L1 3775 3827 -2319 * 3291 210 18 1 chr5 74905586 74906304 -124723846 - L1M4 LINE L1 -1799 4347 3618 271 0 0 0 chr5 74906439 74906469 -124723681 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2187 108 0 0 chr5 74906469 74906755 -124723395 - AluSx SINE Alu -1 315 1 4122 143 86 7 chr5 74907322 74908024 -124722126 + Tigger2 DNA MER2_type 1 757 -1961 1692 126 16 4 chr5 74908073 74908328 -124721822 + Tigger2 DNA MER2_type 2461 2718 0 7350 211 79 42 chr5 74909175 74910263 -124719887 - L1MC4a LINE L1 0 7808 6762 291 28 0 0 chr5 74910263 74910299 -124719851 + (TG)n Simple_repeat Simple_repeat 1 36 0 7350 211 79 42 chr5 74910299 74910357 -124719793 - L1MC4a LINE L1 -1046 6762 6708 1773 138 65 0 chr5 74910357 74910633 -124719517 - AluSg SINE Alu -16 294 1 7350 211 79 42 chr5 74910633 74911483 -124718667 - L1MC4a LINE L1 -1100 6708 5728 2304 101 13 0 chr5 74911483 74911790 -124718360 - AluSq SINE Alu -2 311 1 7350 211 79 42 chr5 74911790 74911881 -124718269 - L1MC4a LINE L1 -2080 5728 5642 2351 80 0 7 chr5 74911881 74912181 -124717969 - AluSp SINE Alu -15 298 1 837 118 15 44 chr5 74912181 74912317 -124717833 - AluY SINE Alu -177 134 3 2298 109 0 0 chr5 74912318 74912622 -124717528 - AluSx SINE Alu -8 304 1 1516 215 37 69 chr5 74912622 74912982 -124717168 - L1MC4a LINE L1 -748 5398 5306 2268 93 7 10 chr5 74912982 74913284 -124716866 - AluSg SINE Alu -9 301 1 1516 215 37 69 chr5 74913284 74913488 -124716662 - L1MC4a LINE L1 -840 5306 5097 816 146 0 82 chr5 74913643 74913801 -124716349 - FRAM SINE Alu -13 163 19 230 253 11 69 chr5 74913855 74913942 -124716208 - LTR67 LTR ERVL -44 513 432 826 256 79 61 chr5 74914220 74914476 -124715674 + L2 LINE L2 2914 3181 -132 2649 105 8 3 chr5 74914476 74914829 -124715321 - THE1A LTR MaLR 0 355 1 826 256 79 61 chr5 74914829 74914963 -124715187 + L2 LINE L2 3181 3311 -2 1029 290 52 44 chr5 74914967 74915425 -124714725 - LTR67 LTR ERVL -60 497 36 2249 108 3 0 chr5 74915653 74915948 -124714202 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr5 74915948 74915969 -124714181 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr5 74916970 74917002 -124713148 + AT_rich Low_complexity Low_complexity 1 32 0 1613 160 3 32 chr5 74918202 74918515 -124711635 + AluJb SINE Alu 3 306 -6 353 237 114 23 chr5 74918550 74918681 -124711469 + MIR SINE MIR 120 262 0 330 241 157 0 chr5 74918851 74918934 -124711216 + MER5B DNA MER1_type 29 124 -54 183 173 240 106 chr5 74918852 74918956 -124711194 - MER5B DNA MER1_type -29 149 32 * 717 242 33 83 chr5 74920046 74920286 -124709864 + MLT1J LTR MaLR 271 498 -13 541 289 46 82 chr5 74920810 74921119 -124709031 - L1ME4a LINE L1 -11 6110 5824 543 29 0 43 chr5 74921119 74921188 -124708962 - L1PA6 LINE L1 -7 6147 6082 541 289 46 82 chr5 74921188 74921376 -124708774 - L1ME4a LINE L1 -297 5824 5631 22 35 0 0 chr5 74921402 74921431 -124708719 + AT_rich Low_complexity Low_complexity 1 29 0 2096 126 9 21 chr5 74922069 74922403 -124707747 - L1M1 LINE L1 -565 5735 5406 991 156 108 0 chr5 74923488 74923674 -124706476 + MER3 DNA MER1_type 1 206 -3 1608 154 16 42 chr5 74923904 74924210 -124705940 + AluJo SINE Alu 1 298 -14 1439 138 33 51 chr5 74924548 74924823 -124705327 + ORSL DNA AcHobo 5 274 -1 184 171 0 0 chr5 74924902 74924937 -124705213 + L2 LINE L2 3274 3308 -5 401 256 211 0 chr5 74925006 74925139 -124705011 + MER5A DNA MER1_type 7 167 -22 823 204 11 28 chr5 74925281 74925462 -124704688 - MER5B DNA MER1_type 0 178 1 402 192 216 0 chr5 74925679 74925804 -124704346 - MIR SINE MIR -25 237 86 1572 88 5 0 chr5 74927052 74927256 -124702894 - AluSx SINE Alu -107 205 1 195 42 0 0 chr5 74927342 74927366 -124702784 + (T)n Simple_repeat Simple_repeat 1 24 0 300 291 73 96 chr5 74928281 74928624 -124701526 - L1M2 LINE L1 -5748 1101 767 351 79 175 0 chr5 74930022 74930085 -124700065 - MER116 DNA Mariner 0 80 7 434 396 20 8 chr5 74930155 74930410 -124699740 - L2 LINE L2 -644 2670 2413 1369 262 74 27 chr5 74930705 74931151 -124698999 - MLT1J LTR MaLR -44 467 1 205 319 53 35 chr5 74931986 74932099 -124698051 + L2 LINE L2 3143 3257 -15 439 278 43 19 chr5 74932311 74932473 -124697677 - MIR3 SINE MIR -35 173 8 334 177 191 71 chr5 74933061 74933202 -124696948 - L1ME4a LINE L1 0 6121 5964 22 35 0 0 chr5 74935996 74936025 -124694125 + GC_rich Low_complexity Low_complexity 1 29 0 2194 103 0 0 chr5 74937477 74937769 -124692381 + AluSx SINE Alu 13 304 -8 1762 188 20 85 chr5 74938625 74939025 -124691125 - MLT1A2 LTR MaLR 0 374 1 224 200 33 0 chr5 74939252 74939312 -124690838 + (TA)n Simple_repeat Simple_repeat 2 63 0 635 294 108 13 chr5 74939381 74939612 -124690538 - MIR SINE MIR -6 256 4 27 0 0 0 chr5 74939911 74939938 -124690212 + AT_rich Low_complexity Low_complexity 1 27 0 2100 118 3 20 chr5 74940381 74940687 -124689463 - AluSx SINE Alu -11 301 1 1663 217 101 47 chr5 74942168 74942720 -124687430 - MLT1E LTR MaLR -5 588 7 2874 177 38 15 chr5 74942755 74943281 -124686869 + MLT2B3 LTR ERVL 1 538 -16 691 231 14 7 chr5 74943304 74943447 -124686703 + MER5A DNA MER1_type 46 189 0 227 333 0 0 chr5 74944082 74944142 -124686008 + MIR SINE MIR 20 79 -183 1707 170 93 19 chr5 74944142 74944466 -124685684 + MER7A DNA MER2_type 1 346 0 507 338 43 17 chr5 74944964 74945084 -124685066 + MIR SINE MIR 19 134 -128 1744 154 25 44 chr5 74945084 74945402 -124684748 - AluJo SINE Alu 0 312 1 507 338 43 17 chr5 74945402 74945515 -124684635 + MIR SINE MIR 134 258 -4 264 318 68 11 chr5 74946036 74946124 -124684026 + L2 LINE L2 2992 3084 -188 223 129 194 32 chr5 74946229 74946291 -124683859 + L2 LINE L2 3242 3313 0 935 142 0 8 chr5 74946333 74946467 -124683683 - FLAM_C SINE Alu 0 133 1 2157 80 59 3 chr5 74947404 74947691 -124682459 + AluSq SINE Alu 1 303 -10 592 279 128 8 chr5 74947901 74948152 -124681998 + MARNA DNA Mariner 80 360 -226 216 0 0 0 chr5 74948168 74948192 -124681958 + (T)n Simple_repeat Simple_repeat 1 24 0 451 230 164 0 chr5 74948393 74948545 -124681605 - L1MD2 LINE L1 0 6359 6183 2128 133 0 3 chr5 74948565 74948873 -124681277 - AluSx SINE Alu 0 312 6 2338 50 0 18 chr5 74948946 74949227 -124680923 - AluY SINE Alu -31 280 5 2735 212 97 22 chr5 74949248 74949973 -124680177 - L1MD2 LINE L1 -160 6199 5421 996 211 80 42 chr5 74950964 74951276 -124678874 + L1ME3A LINE L1 5844 6167 -3 237 33 0 0 chr5 74951792 74951822 -124678328 + (GA)n Simple_repeat Simple_repeat 2 31 0 28 0 0 0 chr5 74953318 74953346 -124676804 + GC_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr5 74954172 74954208 -124675942 + GC_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr5 74955119 74955151 -124674999 + AT_rich Low_complexity Low_complexity 1 32 0 2709 29 3 0 chr5 74956442 74956748 -124673402 + AluY SINE Alu 1 307 -4 231 88 0 0 chr5 74957764 74957798 -124672352 + (TG)n Simple_repeat Simple_repeat 1 34 0 355 224 16 96 chr5 74958169 74958294 -124671856 + MIR SINE MIR 78 192 -70 289 253 178 34 chr5 74958324 74958470 -124671680 + L1ME3A LINE L1 5995 6161 -9 22 0 0 0 chr5 74963561 74963583 -124666567 + GC_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr5 74963599 74963635 -124666515 + GC_rich Low_complexity Low_complexity 1 36 0 226 24 0 73 chr5 74963700 74963741 -124666409 + (CGG)n Simple_repeat Simple_repeat 3 40 0 272 189 0 0 chr5 74967251 74967304 -124662846 - L2 LINE L2 -3 3310 3258 1733 165 0 33 chr5 74967437 74967740 -124662410 + AluJb SINE Alu 5 297 -15 609 223 152 25 chr5 74968535 74968732 -124661418 + MIR SINE MIR 16 237 -25 350 232 73 73 chr5 74968845 74969009 -124661141 + MIR3 SINE MIR 31 194 -14 273 197 158 0 chr5 74969738 74969814 -124660336 + MER5B DNA MER1_type 90 177 -1 564 298 147 41 chr5 74970571 74971007 -124659143 - L3 LINE CR1 -12 1565 1084 3180 151 50 4 chr5 74971027 74971531 -124658619 - MER1A DNA MER1_type 0 527 1 308 276 186 10 chr5 74971583 74971782 -124658368 + MIR SINE MIR 15 248 -14 2336 118 0 0 chr5 74971794 74972100 -124658050 - AluSx SINE Alu -6 306 1 565 363 146 19 chr5 74972136 74972924 -124657226 - L3 LINE CR1 -644 933 46 2228 104 3 3 chr5 74973285 74973584 -124656566 + AluSp SINE Alu 1 299 -14 205 193 18 53 chr5 74973610 74973667 -124656483 + MIR3 SINE MIR 14 68 -140 355 329 87 0 chr5 74974903 74975064 -124655086 + MIR3 SINE MIR 30 204 -4 206 62 31 0 chr5 74977351 74977383 -124652767 + (TA)n Simple_repeat Simple_repeat 2 34 0 21 36 0 0 chr5 74977639 74977667 -124652483 + AT_rich Low_complexity Low_complexity 1 28 0 218 97 0 0 chr5 74978809 74978840 -124651310 + MIR SINE MIR 121 151 -111 25 0 0 0 chr5 74979698 74979723 -124650427 + AT_rich Low_complexity Low_complexity 1 25 0 337 269 172 8 chr5 74979988 74980122 -124650028 - MIR SINE MIR -12 250 95 2919 238 89 30 chr5 74980801 74981655 -124648495 + MER97b DNA MER1_type? 1 924 -129 2048 153 0 0 chr5 74981655 74981955 -124648195 + AluJb SINE Alu 1 300 -12 2919 238 89 30 chr5 74981955 74982094 -124648056 + MER97b DNA MER1_type? 924 1053 0 342 245 85 9 chr5 74982860 74982966 -124647184 + MER5B DNA MER1_type 25 138 -40 251 246 25 68 chr5 74983153 74983271 -124646879 - MIR SINE MIR -64 198 86 563 208 10 0 chr5 74983294 74983421 -124646729 - FLAM_A SINE Alu 0 144 17 206 206 0 0 chr5 74983966 74984000 -124646150 + C-rich Low_complexity Low_complexity 2 35 0 609 284 95 49 chr5 74984898 74985173 -124644977 - MLT1J LTR MaLR -49 462 166 2150 159 11 3 chr5 74985173 74985531 -124644619 + MER46B DNA MER2_type 1 236 0 609 284 95 49 chr5 74985531 74985603 -124644547 - MLT1J LTR MaLR -345 166 99 431 163 65 0 chr5 74985607 74985699 -124644451 - MER33 DNA MER1_type -1 362 265 524 100 0 38 chr5 74985735 74985815 -124644335 - MER33 DNA MER1_type -247 77 1 342 270 30 0 chr5 74985815 74985915 -124644235 - MLT1J LTR MaLR -408 103 1 465 200 129 29 chr5 74987137 74987277 -124642873 - MIR SINE MIR -30 232 79 233 396 0 0 chr5 74987602 74987708 -124642442 - MIR3 SINE MIR -30 178 73 2336 117 0 0 chr5 74988396 74988705 -124641445 - AluSg SINE Alu -1 309 1 1607 138 4 4 chr5 74988805 74989036 -124641114 - AluSx SINE Alu -46 266 36 264 318 169 14 chr5 74989318 74989466 -124640684 + MIR SINE MIR 14 184 -78 367 287 153 10 chr5 74989727 74989936 -124640214 - L1ME4a LINE L1 -194 5927 5689 200 292 125 14 chr5 74990260 74990332 -124639818 - L2 LINE L2 -51 3221 3142 359 245 23 11 chr5 74990901 74991023 -124639127 - MIR SINE MIR -62 146 28 431 225 0 0 chr5 74991184 74991273 -124638877 - MIR SINE MIR -114 148 60 1543 289 57 4 chr5 74994464 74994994 -124635156 + L2 LINE L2 2346 2903 -411 2343 97 0 10 chr5 74995011 74995320 -124634830 + AluY SINE Alu 1 306 -5 444 279 108 26 chr5 74995320 74995661 -124634489 - L1MEd LINE L1 -5002 1117 749 242 297 0 31 chr5 74995761 74995825 -124634325 - L1MEd LINE L1 -5526 593 532 392 285 92 29 chr5 74995962 74996169 -124633981 - L1MEd LINE L1 -5800 319 100 21 0 0 0 chr5 74996255 74996276 -124633874 + AT_rich Low_complexity Low_complexity 1 21 0 233 313 61 56 chr5 74996293 74996491 -124633659 + L2 LINE L2 3025 3223 -49 254 121 0 17 chr5 74998148 74998206 -124631944 + (CCG)n Simple_repeat Simple_repeat 1 57 0 24 0 0 0 chr5 74998206 74998230 -124631920 + GC_rich Low_complexity Low_complexity 1 24 0 216 206 15 29 chr5 74998316 74998384 -124631766 + (CCG)n Simple_repeat Simple_repeat 2 68 0 * 228 226 0 0 chr5 74998371 74998424 -124631726 + CT-rich Low_complexity Low_complexity 1 53 0 36 91 0 0 chr5 74998492 74998591 -124631559 + GC_rich Low_complexity Low_complexity 1 99 0 1705 37 56 9 chr5 74999667 74999883 -124630267 + AluSq SINE Alu 76 301 -12 2460 119 28 56 chr5 75002446 75002907 -124627243 - L1MB3 LINE L1 -11 6172 5725 1104 220 149 22 chr5 75004971 75005473 -124624677 + L1ME4a LINE L1 5518 6081 -40 1447 121 5 5 chr5 75005754 75005969 -124624181 + L1MA2 LINE L1 6086 6300 -4 441 198 24 145 chr5 75006128 75006335 -124623815 - MER112 DNA MER1_type -41 219 38 492 113 28 0 chr5 75006341 75006412 -124623738 + AluJo SINE Alu 64 136 -176 305 176 44 15 chr5 75006468 75006536 -124623614 - L1PA15 LINE L1 -2 6163 6094 4590 125 15 3 chr5 75006480 75007134 -124623016 - L1PA16 LINE L1 -17 6149 5488 286 237 92 40 chr5 75007240 75007392 -124622758 + MER103 DNA DNA 5 164 -2 937 107 0 50 chr5 75007434 75007574 -124622576 + FLAM_C SINE Alu 1 133 0 723 253 82 79 chr5 75007633 75008013 -124622137 - L2 LINE L2 0 3313 2933 855 253 193 28 chr5 75008066 75008381 -124621769 - MLT1G1 LTR MaLR -28 514 88 2033 157 25 73 chr5 75008381 75008789 -124621361 - MLT1B LTR MaLR 0 390 3 855 253 193 28 chr5 75008789 75008895 -124621255 - MLT1G1 LTR MaLR -454 88 1 2317 100 0 0 chr5 75008921 75009212 -124620938 + AluSg SINE Alu 1 291 -19 1007 173 0 0 chr5 75009225 75009387 -124620763 + AluSg/x SINE Alu 135 296 -14 930 195 0 24 chr5 75009478 75009647 -124620503 - FRAM SINE Alu -18 158 1 207 114 0 0 chr5 75009648 75009683 -124620467 + (T)n Simple_repeat Simple_repeat 1 35 0 323 221 39 0 chr5 75010448 75010536 -124619614 + MER5A DNA MER1_type 33 137 -50 227 321 111 86 chr5 75010677 75010971 -124619179 + L2 LINE L2 2818 3126 -146 5226 87 41 1 chr5 75010971 75011636 -124618514 + LTR8 LTR ERV1 1 691 0 227 321 111 86 chr5 75011636 75011737 -124618413 + L2 LINE L2 3126 3223 -49 2031 164 39 66 chr5 75011737 75012282 -124617868 + LTR9 LTR ERV1 1 612 0 858 130 0 0 chr5 75012482 75012597 -124617553 + AluJo/FLAM SINE Alu 9 123 -189 2028 135 0 0 chr5 75012597 75012878 -124617272 - AluSx SINE Alu -31 281 1 306 98 0 0 chr5 75012878 75012919 -124617231 + MSTB LTR MaLR 386 426 0 485 211 16 65 chr5 75012930 75013053 -124617097 + MER5B DNA MER1_type 1 117 -61 659 217 76 6 chr5 75013365 75013468 -124616682 + MER5A DNA MER1_type 1 120 -69 1748 187 16 55 chr5 75013468 75013526 -124616624 + MLT1A1 LTR MaLR 1 60 -305 2145 95 53 0 chr5 75013526 75013811 -124616339 + AluSx SINE Alu 1 300 -12 1748 187 16 55 chr5 75013811 75014131 -124616019 + MLT1A1 LTR MaLR 60 364 -1 659 217 76 6 chr5 75014131 75014184 -124615966 + MER5A DNA MER1_type 120 168 -21 2390 55 0 7 chr5 75015045 75015338 -124614812 + AluY SINE Alu 1 291 -20 441 116 0 0 chr5 75015338 75015407 -124614743 + (GGGA)n Simple_repeat Simple_repeat 3 71 0 296 316 60 23 chr5 75015952 75016085 -124614065 - L1ME LINE L1 -595 5526 5389 288 266 140 72 chr5 75016189 75016210 -124613940 - L1ME LINE L1 -884 5262 5244 4401 110 5 33 chr5 75016210 75016838 -124613312 - MER4B LTR ERV1 0 610 1 288 266 140 72 chr5 75016838 75017164 -124612986 - L1ME LINE L1 -902 5244 4942 1925 135 3 30 chr5 75017164 75017468 -124612682 + AluSx SINE Alu 2 297 -15 288 266 140 72 chr5 75017468 75017583 -124612567 - L1ME LINE L1 -1204 4942 4836 1817 163 3 0 chr5 75017583 75017890 -124612260 - AluJb SINE Alu 0 308 1 288 266 140 72 chr5 75017890 75017924 -124612226 - L1ME LINE L1 -1310 4836 4729 234 356 58 0 chr5 75017947 75018034 -124612116 - L2 LINE L2 -21 3251 3160 935 198 121 105 chr5 75018244 75018290 -124611860 - MLT2B1 LTR ERVL 0 520 476 342 45 0 0 chr5 75018290 75018334 -124611816 + (TG)n Simple_repeat Simple_repeat 2 45 0 935 198 121 105 chr5 75018334 75018601 -124611549 - MLT2B1 LTR ERVL -44 476 202 7750 31 3 0 chr5 75018602 75020060 -124610090 - L1PA3 LINE L1 0 6155 4674 289 194 60 0 chr5 75020060 75020127 -124610023 - LTR32 LTR ERVL -36 435 365 1797 192 68 0 chr5 75020290 75020628 -124609522 - LTR32 LTR ERVL -97 374 14 228 86 0 0 chr5 75021196 75021231 -124608919 + (TTTTC)n Simple_repeat Simple_repeat 1 35 0 1815 179 3 6 chr5 75021233 75021546 -124608604 - AluJb SINE Alu 0 312 1 451 303 163 49 chr5 75023110 75023293 -124606857 + L3 LINE CR1 726 887 -690 1922 167 0 3 chr5 75023293 75023593 -124606557 - AluJb SINE Alu -13 299 1 451 303 163 49 chr5 75023593 75023795 -124606355 + L3 LINE CR1 887 1155 -422 1693 163 63 9 chr5 75023839 75024158 -124605992 + MER106B DNA MER1_type 183 518 -541 809 169 0 7 chr5 75024180 75024316 -124605834 + AluJo SINE Alu 1 135 -177 2078 141 3 0 chr5 75024316 75024621 -124605529 + AluSp SINE Alu 1 306 -7 1358 186 29 32 chr5 75024628 75024973 -124605177 + MER106B DNA MER1_type 667 1010 -49 28 29 0 0 chr5 75024973 75025008 -124605142 + AT_rich Low_complexity Low_complexity 1 35 0 834 131 0 39 chr5 75025028 75025158 -124604992 - FLAM_C SINE Alu -8 125 1 834 269 75 60 chr5 75025417 75025815 -124604335 + MLT1K LTR MaLR 179 582 -6 2022 130 0 3 chr5 75025815 75026100 -124604050 + AluSx SINE Alu 26 309 -3 22 0 0 0 chr5 75026446 75026468 -124603682 + AT_rich Low_complexity Low_complexity 1 22 0 1539 180 70 3 chr5 75027020 75027304 -124602846 - AluJo SINE Alu -9 303 1 197 316 88 44 chr5 75027374 75027510 -124602640 - L2 LINE L2 -949 2365 2224 1745 121 64 18 chr5 75027599 75027879 -124602271 - MER1B DNA MER1_type 0 339 47 297 0 0 0 chr5 75027955 75027988 -124602162 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 1852 173 3 3 chr5 75028424 75028736 -124601414 - AluJb SINE Alu 0 312 1 566 231 111 22 chr5 75029207 75029641 -124600509 + MER113 DNA MER1_type? 16 519 -2 372 62 0 0 chr5 75029797 75029845 -124600305 - MLT2B1 LTR ERVL 0 520 473 201 175 0 0 chr5 75029862 75029902 -124600248 + (CA)n Simple_repeat Simple_repeat 1 40 0 6235 130 12 7 chr5 75029904 75030827 -124599323 - ERVL-B1 LTR ERVL -333 5431 4504 1362 198 4 4 chr5 75030828 75031076 -124599074 + AluJb SINE Alu 1 248 -64 15409 144 12 6 chr5 75031076 75033416 -124596734 - ERVL-B1 LTR ERVL -1328 4436 2081 2222 103 7 0 chr5 75033416 75033708 -124596442 + AluSq SINE Alu 1 294 -19 1167 156 0 0 chr5 75033708 75033887 -124596263 + AluSg/x SINE Alu 134 312 0 4598 195 26 29 chr5 75033889 75033917 -124596233 - ERVL-B1 LTR ERVL -3676 2088 2061 3703 147 10 2 chr5 75033917 75034440 -124595710 + MER1A DNA MER1_type 1 527 0 4598 195 26 29 chr5 75034440 75035309 -124594841 - ERVL-B1 LTR ERVL -3703 2061 1194 22 35 0 0 chr5 75035309 75035338 -124594812 + AT_rich Low_complexity Low_complexity 1 29 0 854 194 50 0 chr5 75035338 75035498 -124594652 - AluJ SINE Alu -16 296 129 675 117 7 45 chr5 75035506 75035660 -124594490 + (TTTC)n Simple_repeat Simple_repeat 1 148 0 521 206 98 0 chr5 75035660 75035762 -124594388 - AluJ SINE Alu -187 125 14 846 181 0 0 chr5 75035773 75035929 -124594221 - AluJb SINE Alu 0 312 157 1226 104 92 30 chr5 75035931 75036128 -124594022 + MER4B-int LTR ERV1 1 220 -6538 180 0 0 0 chr5 75036128 75036148 -124594002 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1226 104 92 30 chr5 75036148 75036225 -124593925 + MER4B-int LTR ERV1 220 291 -6467 3099 146 35 0 chr5 75036264 75036744 -124593406 + MER4B-int LTR ERV1 238 734 -6024 2277 105 3 3 chr5 75036752 75037057 -124593093 + AluSx SINE Alu 1 305 -7 2698 128 25 5 chr5 75037057 75037457 -124592693 - MER4D LTR ERV1 -495 408 1 337 89 0 0 chr5 75037457 75037502 -124592648 - ERVL-B1 LTR ERVL -5608 46 2 1494 208 32 61 chr5 75037617 75037727 -124592423 - MLT1A2 LTR MaLR -10 364 252 1936 161 0 0 chr5 75037727 75038026 -124592124 + AluSx SINE Alu 1 299 -13 1494 208 32 61 chr5 75038026 75038290 -124591860 - MLT1A2 LTR MaLR -122 252 1 303 299 108 32 chr5 75038440 75038597 -124591553 - MER5B DNA MER1_type -5 173 5 1968 146 7 7 chr5 75039151 75039452 -124590698 - AluJb SINE Alu -11 301 1 285 280 96 34 chr5 75039629 75039868 -124590282 + L1M4 LINE L1 4932 5185 -961 2382 82 0 0 chr5 75039966 75040258 -124589892 + AluSg SINE Alu 1 292 -18 1905 202 92 28 chr5 75040365 75040801 -124589349 - MLT2B1 LTR ERVL -56 464 1 807 185 0 0 chr5 75040855 75040985 -124589165 + FLAM_C SINE Alu 1 130 -3 237 238 159 20 chr5 75041052 75041203 -124588947 - L1MC4a LINE L1 -1564 6244 6073 304 262 8 107 chr5 75041489 75041611 -124588539 - MLT1I LTR MaLR 0 549 440 265 286 50 8 chr5 75041775 75041894 -124588256 - MLT1I LTR MaLR -267 142 19 869 320 93 20 chr5 75042242 75042651 -124587499 - L2 LINE L2 -448 2866 2428 1078 224 65 4 chr5 75042784 75043030 -124587120 + MIR SINE MIR 2 262 0 28 0 0 0 chr5 75043338 75043366 -124586784 + AT_rich Low_complexity Low_complexity 1 28 0 988 59 17 0 chr5 75043366 75043485 -124586665 - AluSq/x SINE Alu -180 132 12 332 275 92 0 chr5 75043599 75043730 -124586420 - L1MC5 LINE L1 -420 7541 7399 1369 155 26 9 chr5 75044434 75044666 -124585484 - MER46A DNA MER2_type 0 236 1 1650 109 142 4 chr5 75044973 75045248 -124584902 + AluSq SINE Alu 1 313 0 243 338 79 0 chr5 75045362 75045501 -124584649 + MER117 DNA MER1_type 1 150 -47 869 141 0 8 chr5 75045711 75045839 -124584311 + FLAM_C SINE Alu 1 127 -6 651 233 0 0 chr5 75045997 75046113 -124584037 + FLAM_A SINE Alu 1 116 -17 46 19 0 0 chr5 75046113 75046166 -124583984 + AT_rich Low_complexity Low_complexity 1 53 0 222 143 0 41 chr5 75048107 75048156 -124581994 + (CCGGG)n Simple_repeat Simple_repeat 4 50 0 1050 249 114 49 chr5 75050589 75051065 -124579085 - L2 LINE L2 -24 3289 2762 2264 88 31 0 chr5 75051170 75051464 -124578686 + AluSx SINE Alu 1 303 -9 231 36 0 0 chr5 75053548 75053576 -124576574 + (T)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr5 75055322 75055344 -124574806 + AT_rich Low_complexity Low_complexity 1 22 0 336 273 155 21 chr5 75055711 75055905 -124574245 - MLT1I LTR MaLR -26 383 164 422 235 0 0 chr5 75055952 75056033 -124574117 - MER5A DNA MER1_type -100 89 9 310 215 107 25 chr5 75056494 75056615 -124573535 - MLT1I LTR MaLR -176 233 103 312 341 65 0 chr5 75056801 75056924 -124573226 - MIR SINE MIR -62 146 16 220 244 0 0 chr5 75057253 75057298 -124572852 + (TA)n Simple_repeat Simple_repeat 1 45 0 320 235 71 12 chr5 75057299 75057384 -124572766 - L1MC4 LINE L1 -1339 6703 6614 211 211 35 18 chr5 75059333 75059390 -124570760 + GA-rich Low_complexity Low_complexity 3 60 0 2067 91 29 0 chr5 75060136 75060433 -124569717 - AluSq SINE Alu 0 305 1 998 282 69 19 chr5 75061268 75061449 -124568701 - LTR16B LTR ERVL 0 464 293 2210 94 0 17 chr5 75061449 75061747 -124568403 - AluSx SINE Alu -19 293 1 998 282 69 19 chr5 75061747 75061987 -124568163 - LTR16B LTR ERVL -171 293 22 229 241 0 19 chr5 75061999 75062053 -124568097 + L2 LINE L2 3217 3269 -3 359 295 131 16 chr5 75063098 75063281 -124566869 + MIR SINE MIR 29 232 -30 214 214 71 75 chr5 75063706 75063842 -124566308 - MIR SINE MIR -68 140 63 334 259 27 18 chr5 75063891 75064003 -124566147 + MER5A DNA MER1_type 72 184 -5 1200 151 0 50 chr5 75064023 75064242 -124565908 + AluJo SINE Alu 85 292 -20 2148 130 6 16 chr5 75064245 75064560 -124565590 + AluSx SINE Alu 1 312 0 194 0 39 0 chr5 75064780 75064806 -124565344 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 607 217 26 0 chr5 75064812 75064927 -124565223 - FLAM_C SINE Alu -25 118 1 197 267 183 30 chr5 75065263 75065394 -124564756 - MIR SINE MIR -86 176 26 1840 160 19 41 chr5 75065546 75065671 -124564479 + AluJb SINE Alu 1 127 -185 243 0 0 0 chr5 75065671 75065698 -124564452 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1840 160 19 41 chr5 75065698 75065891 -124564259 + AluJb SINE Alu 127 312 0 2198 58 4 0 chr5 75066360 75066621 -124563529 + AluY SINE Alu 35 296 -15 15348 118 21 12 chr5 75066738 75069134 -124561016 - Tigger1 DNA MER2_type 0 2418 1 2056 136 0 0 chr5 75070047 75070333 -124559817 - AluSx SINE Alu -26 286 1 272 259 49 12 chr5 75070357 75070438 -124559712 - MER20B DNA MER1_type -600 183 100 1039 226 54 13 chr5 75071451 75071690 -124558460 + MIR SINE MIR 14 262 0 522 350 151 24 chr5 75071701 75072316 -124557834 + L2 LINE L2 2061 2753 -561 983 191 0 0 chr5 75072401 75072563 -124557587 - FRAM SINE Alu -4 162 1 2103 120 118 8 chr5 75072574 75072931 -124557219 - MSTD LTR MaLR 0 396 1 3071 221 102 18 chr5 75072931 75073696 -124556454 - MSTD-int LTR MaLR 0 1735 907 3996 139 63 4 chr5 75073696 75074374 -124555776 - MER72 LTR ERV1 0 722 5 1314 225 28 110 chr5 75074378 75074924 -124555226 - MSTD-int LTR MaLR -825 910 410 211 355 66 33 chr5 75075376 75075497 -124554653 + L2 LINE L2 2630 2754 -560 321 292 110 7 chr5 75075676 75075830 -124554320 + MARNA DNA Mariner 299 468 -118 485 161 54 95 chr5 75075916 75076084 -124554066 - L1MD1 LINE L1 -1 6241 6081 * 3791 188 65 44 chr5 75076080 75076251 -124553899 - L1MD2 LINE L1 -42 6317 6151 1956 134 22 0 chr5 75076251 75076551 -124553599 - AluSx SINE Alu 0 306 1 3791 188 65 44 chr5 75076551 75077522 -124552628 - L1MD2 LINE L1 -208 6151 5159 463 279 133 52 chr5 75078033 75078259 -124551891 + Tigger8 DNA MER2_type 169 375 -291 405 0 0 0 chr5 75078259 75078304 -124551846 + (TA)n Simple_repeat Simple_repeat 2 46 0 2320 58 0 4 chr5 75078308 75078585 -124551565 - AluSx SINE Alu 0 312 37 463 279 133 52 chr5 75078585 75078812 -124551338 + Tigger8 DNA MER2_type 377 664 -2 217 344 58 32 chr5 75078992 75079146 -124551004 + L2 LINE L2 3096 3253 -19 437 306 48 71 chr5 75080258 75080457 -124549693 - MIR SINE MIR 0 262 69 1802 174 13 0 chr5 75080457 75080762 -124549388 + AluJb SINE Alu 1 309 -3 437 306 48 71 chr5 75080762 75080814 -124549336 - MIR SINE MIR -193 69 17 370 309 41 0 chr5 75080903 75081026 -124549124 + MIR SINE MIR 21 148 -114 4065 157 51 19 chr5 75081062 75081801 -124548349 + MER21B LTR ERV1 1 763 -100 2462 81 0 3 chr5 75082015 75082324 -124547826 + AluY SINE Alu 1 308 -3 1297 117 0 6 chr5 75082624 75082804 -124547346 - AluSq SINE Alu -2 311 133 2266 104 0 10 chr5 75082805 75083104 -124547046 - AluSq SINE Alu -17 296 1 24 0 0 0 chr5 75084702 75084726 -124545424 + AT_rich Low_complexity Low_complexity 1 24 0 1255 151 5 46 chr5 75085472 75085690 -124544460 - AluJo SINE Alu -30 282 74 1360 238 141 102 chr5 75085703 75085857 -124544293 - Charlie7 DNA MER1_type -644 1968 1822 2360 109 0 0 chr5 75085857 75086159 -124543991 + AluSx SINE Alu 1 302 -10 1360 238 141 102 chr5 75086159 75086725 -124543425 - Charlie7 DNA MER1_type -790 1822 1280 2281 126 0 0 chr5 75086725 75087035 -124543115 + AluSx SINE Alu 1 310 -2 1360 238 141 102 chr5 75087035 75087089 -124543061 - Charlie7 DNA MER1_type -1332 1280 1230 994 80 0 43 chr5 75087089 75087252 -124542898 + L1PB1 LINE L1 5996 6151 0 1360 238 141 102 chr5 75087252 75087486 -124542664 - Charlie7 DNA MER1_type -1382 1230 1007 942 131 0 0 chr5 75087486 75087616 -124542534 - FLAM_C SINE Alu -3 130 1 1360 238 141 102 chr5 75087616 75088099 -124542051 - Charlie7 DNA MER1_type -1605 1007 415 1983 147 3 3 chr5 75088146 75088439 -124541711 + AluSx SINE Alu 1 293 -19 1352 184 78 4 chr5 75088453 75088698 -124541452 + AluJo SINE Alu 23 285 -27 332 333 105 19 chr5 75088722 75088932 -124541218 - Charlie7 DNA MER1_type -2262 350 123 2131 122 20 0 chr5 75089029 75089325 -124540825 - AluSq SINE Alu -11 302 1 569 129 21 0 chr5 75089375 75089468 -124540682 + AluSg/x SINE Alu 135 229 -81 1820 169 38 38 chr5 75089794 75090221 -124539929 - L1MB3 LINE L1 -2 6181 5755 3420 154 22 5 chr5 75090671 75091274 -124538876 - L1MB3 LINE L1 -2 6181 5569 2132 100 4 4 chr5 75092224 75092534 -124537616 - AluSc SINE Alu 0 310 1 2374 73 3 16 chr5 75093120 75093435 -124536715 - AluY SINE Alu 0 311 1 600 212 78 13 chr5 75093561 75093829 -124536321 + HsTC2 DNA Tc2 3 317 -1581 25 83 0 0 chr5 75093937 75093997 -124536153 + AT_rich Low_complexity Low_complexity 1 60 0 324 288 110 14 chr5 75094334 75094480 -124535670 - L1ME4a LINE L1 -2 6119 5960 21 0 0 0 chr5 75094717 75094738 -124535412 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 75094789 75094813 -124535337 + AT_rich Low_complexity Low_complexity 1 24 0 2118 105 11 7 chr5 75095281 75095567 -124534583 - AluSc SINE Alu -22 287 1 877 153 12 24 chr5 75095943 75096113 -124534037 - FRAM SINE Alu 0 176 9 31 58 0 0 chr5 75096709 75096761 -124533389 + AT_rich Low_complexity Low_complexity 1 52 0 23 68 0 0 chr5 75097068 75097112 -124533038 + AT_rich Low_complexity Low_complexity 1 44 0 1372 186 67 32 chr5 75097112 75097397 -124532753 + AluJo SINE Alu 1 295 -17 1884 145 10 7 chr5 75097625 75097914 -124532236 - AluJo SINE Alu -20 292 3 216 0 0 0 chr5 75097983 75098007 -124532143 + (CA)n Simple_repeat Simple_repeat 2 25 0 970 170 6 6 chr5 75098148 75098307 -124531843 + MER5A DNA MER1_type 31 189 0 1074 264 80 46 chr5 75101280 75101735 -124528415 + L1MEc LINE L1 1533 1971 -4244 2817 13 0 0 chr5 75101735 75102044 -124528106 - AluYb8 SINE Alu -9 309 1 1074 264 80 46 chr5 75102044 75102744 -124527406 + L1MEc LINE L1 1971 2690 -3525 1384 119 0 5 chr5 75102868 75103053 -124527097 + AluSg SINE Alu 1 184 -126 22 0 0 0 chr5 75104065 75104087 -124526063 + AT_rich Low_complexity Low_complexity 1 22 0 303 281 21 42 chr5 75104892 75104988 -124525162 - L2 LINE L2 -1 3312 3219 1866 147 27 10 chr5 75105141 75105441 -124524709 - AluSx SINE Alu -7 305 1 1595 76 0 0 chr5 75106501 75106698 -124523452 + AluY SINE Alu 104 300 -11 1050 133 0 13 chr5 75108847 75109005 -124521145 - FRAM SINE Alu -20 156 1 227 327 142 36 chr5 75109489 75109672 -124520478 - MIR SINE MIR -4 258 57 2270 95 3 0 chr5 75110460 75110754 -124519396 - AluSc SINE Alu -14 295 1 1497 237 77 25 chr5 75111700 75112219 -124517931 - L1ME1 LINE L1 -24 6142 5597 318 188 62 10 chr5 75112254 75112350 -124517800 - L1ME4a LINE L1 0 6121 6021 207 244 0 61 chr5 75114426 75114508 -124515642 + L3b LINE CR1 1339 1415 -168 1498 301 137 29 chr5 75114698 75115495 -124514655 - L3 LINE CR1 -67 1510 628 732 205 30 12 chr5 75116413 75116579 -124513571 + MIR SINE MIR 60 228 -34 260 244 281 7 chr5 75117142 75117277 -124512873 + MIR SINE MIR 19 190 -72 1384 134 14 9 chr5 75117803 75118020 -124512130 - AluJb SINE Alu -10 302 85 1532 128 14 48 chr5 75119282 75119571 -124510579 - L1MC1 LINE L1 -418 5915 5637 378 258 55 61 chr5 75119597 75119760 -124510390 + L2 LINE L2 3152 3313 0 1524 65 15 0 chr5 75119970 75120171 -124509979 - L1PB1 LINE L1 -1 6150 5947 513 249 111 51 chr5 75120245 75120462 -124509688 - MIR SINE MIR -25 237 8 262 186 0 17 chr5 75120491 75120535 -124509615 - MSTA LTR MaLR -4 424 380 565 69 11 0 chr5 75120535 75120622 -124509528 + L1PB2 LINE L1 6063 6150 -1 262 186 0 17 chr5 75120622 75120636 -124509514 - MSTA LTR MaLR -48 380 367 314 154 15 0 chr5 75120638 75120703 -124509447 + L1MC4 LINE L1 7151 7216 -826 2443 134 26 0 chr5 75120745 75121133 -124509017 - MSTA LTR MaLR -28 400 3 285 277 176 34 chr5 75121937 75122085 -124508065 + MIR SINE MIR 84 252 -10 261 105 53 13 chr5 75122149 75122225 -124507925 + (TTAA)n Simple_repeat Simple_repeat 1 79 0 218 312 43 43 chr5 75122229 75122370 -124507780 - MIR SINE MIR -6 256 116 299 303 0 13 chr5 75122628 75122704 -124507446 + L2 LINE L2 2686 2760 -554 183 83 0 0 chr5 75122881 75122905 -124507245 + L2 LINE L2 3033 3056 -257 426 289 118 7 chr5 75122950 75123085 -124507065 + L2 LINE L2 3123 3272 0 507 255 63 74 chr5 75123285 75123525 -124506625 + MIR SINE MIR 13 257 -5 213 263 0 18 chr5 75123819 75123876 -124506274 + GA-rich Low_complexity Low_complexity 1 56 0 2142 93 0 17 chr5 75124414 75124791 -124505359 - AluSq SINE Alu 0 372 1 260 226 71 36 chr5 75125282 75125366 -124504784 + MIR3 SINE MIR 115 201 -7 438 69 0 0 chr5 75125457 75125515 -124504635 + (TG)n Simple_repeat Simple_repeat 2 59 0 1511 204 29 0 chr5 75126511 75126785 -124503365 + AluJb SINE Alu 1 282 -30 353 39 0 19 chr5 75126803 75126855 -124503295 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1822 169 3 32 chr5 75126860 75127173 -124502977 + AluJo SINE Alu 1 304 -8 952 297 71 26 chr5 75127407 75127828 -124502322 - L3 LINE CR1 -149 1428 989 405 0 0 0 chr5 75128316 75128361 -124501789 + (TG)n Simple_repeat Simple_repeat 2 46 0 * 495 48 0 0 chr5 75128360 75128422 -124501728 + (TA)n Simple_repeat Simple_repeat 1 62 0 255 241 0 17 chr5 75128422 75128480 -124501670 - AluY SINE Alu -30 271 215 520 262 8 22 chr5 75128675 75129038 -124501112 + G-rich Low_complexity Low_complexity 1 358 0 233 236 140 90 chr5 75131521 75131699 -124498451 - L2 LINE L2 0 3313 3127 348 200 108 15 chr5 75131784 75131914 -124498236 - MER106B DNA MER1_type -1 1058 917 197 232 58 58 chr5 75132313 75132382 -124497768 - MIR3 SINE MIR -15 193 125 223 261 58 72 chr5 75132930 75132999 -124497151 + L2 LINE L2 3199 3266 -6 815 249 92 43 chr5 75133092 75133396 -124496754 + MER110A LTR ERV1 1 335 -133 1816 156 3 0 chr5 75133396 75133685 -124496465 + AluJb SINE Alu 1 290 -22 815 249 92 43 chr5 75133685 75133825 -124496325 + MER110A LTR ERV1 335 467 -1 2273 104 0 16 chr5 75134505 75134813 -124495337 - AluSx SINE Alu -9 303 1 963 134 30 6 chr5 75136091 75136255 -124493895 + L1MC1 LINE L1 6166 6333 0 281 238 14 49 chr5 75136291 75136434 -124493716 + L1ME3A LINE L1 5522 5659 -503 415 293 152 5 chr5 75136456 75136654 -124493496 + L1ME3A LINE L1 5725 5951 -219 180 182 0 0 chr5 75136817 75136861 -124493289 + CT-rich Low_complexity Low_complexity 1 44 0 206 200 0 0 chr5 75136861 75136896 -124493254 + (CA)n Simple_repeat Simple_repeat 2 36 0 2402 130 31 6 chr5 75136926 75137281 -124492869 - THE1B LTR MaLR 0 364 1 11584 92 19 1 chr5 75137281 75138833 -124491317 - THE1B-int LTR MaLR 0 1580 1 2214 150 31 8 chr5 75138835 75139189 -124490961 - THE1B LTR MaLR -2 362 1 301 277 0 90 chr5 75139195 75139350 -124490800 - L1ME LINE L1 -503 5659 5519 499 348 6 0 chr5 75139352 75139516 -124490634 + MER5B DNA MER1_type 13 177 -1 2198 82 0 7 chr5 75139873 75140203 -124489947 - AluY SINE Alu 0 328 1 261 253 192 20 chr5 75140329 75140428 -124489722 - L2 LINE L2 -2 3270 3155 401 211 0 0 chr5 75140456 75140532 -124489618 - Tigger5 DNA MER2_type 0 2323 2248 1367 199 13 65 chr5 75140540 75140847 -124489303 - Tigger5 DNA MER2_type -2031 292 2 21 0 0 0 chr5 75141073 75141094 -124489056 + AT_rich Low_complexity Low_complexity 1 21 0 180 330 20 40 chr5 75141886 75141986 -124488164 + MIR SINE MIR 94 191 -71 251 179 18 18 chr5 75142369 75142425 -124487725 - L2 LINE L2 0 3313 3258 658 304 28 18 chr5 75143065 75143282 -124486868 - MIR SINE MIR -35 227 9 601 134 0 0 chr5 75143593 75143690 -124486460 - AluSg/x SINE Alu -5 307 211 261 337 82 14 chr5 75144290 75144655 -124485495 - L1ME LINE L1 -1196 4950 4561 26 30 0 0 chr5 75145631 75145664 -124484486 + AT_rich Low_complexity Low_complexity 1 33 0 760 174 0 0 chr5 75147010 75147131 -124483019 + FLAM_A SINE Alu 1 121 -12 2082 143 0 0 chr5 75148752 75149060 -124481090 + AluSx SINE Alu 1 308 -4 740 186 8 0 chr5 75151469 75151593 -124478557 - FLAM_C SINE Alu -8 125 1 30 59 0 0 chr5 75152220 75152271 -124477879 + AT_rich Low_complexity Low_complexity 1 51 0 1254 163 3 130 chr5 75152335 75152636 -124477514 - AluJo SINE Alu -29 283 21 219 284 60 30 chr5 75152643 75152710 -124477440 - L2 LINE L2 -10 3303 3235 185 137 27 27 chr5 75152784 75152857 -124477293 + (TA)n Simple_repeat Simple_repeat 1 73 0 615 303 61 4 chr5 75153631 75153862 -124476288 + MIR SINE MIR 12 255 -7 1962 121 11 0 chr5 75156171 75156444 -124473706 - AluSx SINE Alu -3 309 34 23 0 0 0 chr5 75157229 75157252 -124472898 + AT_rich Low_complexity Low_complexity 1 23 0 1245 185 127 11 chr5 75159497 75159757 -124470393 - AluJo SINE Alu -22 290 1 1908 163 0 0 chr5 75159799 75160094 -124470056 + AluJb SINE Alu 1 295 -17 1884 145 10 7 chr5 75160322 75160611 -124469539 - AluJo SINE Alu -20 292 3 216 0 0 0 chr5 75160680 75160704 -124469446 + (CA)n Simple_repeat Simple_repeat 2 25 0 970 174 7 0 chr5 75160845 75161000 -124469150 + MER5A DNA MER1_type 31 186 -3 411 284 41 18 chr5 75161191 75161360 -124468790 - L1MC/D LINE L1 -2051 5757 5585 204 327 36 36 chr5 75162364 75162474 -124467676 - MIR3 SINE MIR -30 178 69 193 213 75 88 chr5 75164133 75164213 -124465937 + L2 LINE L2 1869 1947 -1367 * 244 303 99 49 chr5 75164195 75164357 -124465793 - L2 LINE L2 -20 3293 3124 444 284 53 0 chr5 75164413 75164582 -124465568 - L2 LINE L2 -329 2984 2807 243 317 0 0 chr5 75165468 75165528 -124464622 + L2 LINE L2 3209 3268 -4 434 372 5 15 chr5 75165681 75165877 -124464273 + L2 LINE L2 2855 3048 -224 283 211 165 0 chr5 75165973 75166082 -124464068 + MER69 DNA AcHobo 2371 2497 -29 249 217 116 0 chr5 75166096 75166165 -124463985 + L2 LINE L2 3229 3305 -8 2161 157 61 22 chr5 75166738 75167146 -124463004 - MSTC LTR MaLR -4 424 1 670 193 108 0 chr5 75167351 75167517 -124462633 - MER69 DNA AcHobo 0 2526 2343 616 262 7 0 chr5 75167516 75167661 -124462489 - MER69 DNA AcHobo -2245 281 136 * 274 288 129 15 chr5 75167840 75167972 -124462178 - MER69 DNA AcHobo -2379 147 1 180 250 19 0 chr5 75168320 75168372 -124461778 - MIR SINE MIR -119 89 37 393 58 0 0 chr5 75168535 75168587 -124461563 + (TG)n Simple_repeat Simple_repeat 1 52 0 236 186 17 0 chr5 75168752 75168811 -124461339 + GA-rich Low_complexity Low_complexity 1 60 0 1494 178 7 3 chr5 75169863 75170166 -124459984 + L1MA6 LINE L1 5997 6300 0 2563 169 9 78 chr5 75170985 75171614 -124458536 - L1MD2 LINE L1 -343 6016 5431 1445 190 26 13 chr5 75171643 75172137 -124458013 - L1MB3 LINE L1 -7 6176 5442 243 0 0 0 chr5 75173031 75173058 -124457092 + (TG)n Simple_repeat Simple_repeat 2 28 0 2127 102 41 14 chr5 75173139 75173434 -124456716 + AluSg SINE Alu 1 303 -7 31 33 0 33 chr5 75173786 75173821 -124456329 + AT_rich Low_complexity Low_complexity 1 35 -23 2131 132 0 0 chr5 75173821 75174108 -124456042 - AluSx SINE Alu -25 287 1 31 33 0 33 chr5 75174108 75174132 -124456018 + AT_rich Low_complexity Low_complexity 35 58 0 218 255 39 0 chr5 75174854 75174905 -124455245 + L2 LINE L2 3251 3303 -10 859 116 0 0 chr5 75175628 75175757 -124454393 + AluSg/x SINE Alu 182 310 0 500 213 79 16 chr5 75175875 75176002 -124454148 + L2 LINE L2 3179 3313 0 599 184 113 98 chr5 75177286 75177552 -124452598 - L1MC4a LINE L1 -1229 6579 6310 5069 134 24 11 chr5 75177573 75178441 -124451709 - L1PA16 LINE L1 0 6166 5288 1048 261 24 22 chr5 75178458 75178829 -124451321 - L1MC3 LINE L1 -1509 6276 5905 2215 75 180 19 chr5 75178836 75179209 -124450941 - LTR3b LTR ERVK -4 433 1 3867 228 82 42 chr5 75179214 75180096 -124450054 - L1ME1 LINE L1 -267 5899 5054 1900 165 0 3 chr5 75180096 75180387 -124449763 - AluSx SINE Alu -22 290 1 3867 228 82 42 chr5 75180387 75181659 -124448491 - L1ME1 LINE L1 -1112 5054 3656 22 35 0 0 chr5 75182493 75182522 -124447628 + AT_rich Low_complexity Low_complexity 1 29 0 198 293 0 17 chr5 75183652 75183710 -124446440 + MIR SINE MIR 104 160 -102 746 229 38 0 chr5 75184235 75184445 -124445705 - L1ME3 LINE L1 0 6162 5945 267 127 164 0 chr5 75184668 75184723 -124445427 - LTR67 LTR ERVL 0 557 494 266 169 68 0 chr5 75285470 75285529 -124344621 - LTR8A LTR ERV1 -664 63 1 2761 183 91 6 chr5 75286121 75286639 -124343511 - MER21B LTR ERV1 -49 814 253 1852 157 45 32 chr5 75286794 75287170 -124342980 + LTR8 LTR ERV1 311 691 0 283 316 40 63 chr5 75287244 75287537 -124342613 + L2 LINE L2 2641 3089 -183 30 27 0 0 chr5 75288085 75288122 -124342028 + AT_rich Low_complexity Low_complexity 1 37 0 201 319 0 29 chr5 75288566 75288635 -124341515 + MIR SINE MIR 18 84 -178 505 272 222 22 chr5 75288635 75288955 -124341195 - LTR33A LTR ERVL 0 523 140 201 319 0 0 chr5 75289590 75289637 -124340513 + (CATG)n Simple_repeat Simple_repeat 3 49 0 2050 46 8 0 chr5 75290278 75290519 -124339631 + L1PA4 LINE L1 5913 6155 0 507 335 45 0 chr5 75290521 75290697 -124339453 - L2 LINE L2 -939 2375 2192 318 281 21 10 chr5 75290697 75290793 -124339357 - L2 LINE L2 -1418 1896 1800 388 253 20 10 chr5 75290828 75290927 -124339223 - MIR SINE MIR -66 142 43 418 339 36 6 chr5 75291721 75291889 -124338261 + MIR SINE MIR 20 192 -70 494 308 54 25 chr5 75291897 75292176 -124337974 - LTR67 LTR ERVL 0 557 271 209 176 0 0 chr5 75292670 75292704 -124337446 + MER5B DNA MER1_type 1 34 -144 9699 34 4 1 chr5 75292823 75293974 -124336176 + L1P LINE L1 3842 4996 -1150 2909 161 23 29 chr5 75294109 75294227 -124335923 + L1 LINE L1 4357 4474 -1672 4170 39 6 16 chr5 75294227 75294714 -124335436 + L1PA5 LINE L1 5669 6151 -3 2909 161 23 29 chr5 75294714 75295255 -124334895 + L1 LINE L1 4474 5012 -1134 303 28 0 0 chr5 75295359 75295395 -124334755 + (GA)n Simple_repeat Simple_repeat 2 37 0 227 343 0 39 chr5 75295691 75295793 -124334357 - MLT1L LTR MaLR -510 105 8 892 227 6 0 chr5 75295886 75296058 -124334092 - MER5B DNA MER1_type -5 173 1 1182 191 40 108 chr5 75296066 75296491 -124333659 + MSTD LTR MaLR 1 396 0 3919 189 21 15 chr5 75296849 75297896 -124332254 + L1M1 LINE L1 3320 4377 -3188 387 234 83 112 chr5 75298010 75298288 -124331862 - L1MEd LINE L1 -1186 1304 967 5062 184 12 24 chr5 75299117 75300221 -124329929 + L1M1 LINE L1 4420 5510 -2055 200 167 42 0 chr5 75300599 75300647 -124329503 + CT-rich Low_complexity Low_complexity 4 53 0 540 214 0 0 chr5 75300945 75301048 -124329102 - MER103 DNA DNA -52 114 12 493 249 193 40 chr5 75303154 75303403 -124326747 + L2 LINE L2 3027 3313 0 588 160 90 13 chr5 75304443 75304599 -124325551 - MER53 DNA DNA -20 169 2 1172 270 52 32 chr5 75306029 75306723 -124323427 - L2 LINE L2 0 3313 2606 1571 115 66 69 chr5 75306745 75307033 -124323117 + AluSq SINE Alu 1 287 -26 288 188 14 29 chr5 75307795 75307864 -124322286 + LTR33 LTR ERVL 106 173 -348 293 256 37 112 chr5 75307955 75308090 -124322060 + LTR33 LTR ERVL 323 438 -83 995 155 0 46 chr5 75308090 75308264 -124321886 - FRAM SINE Alu 0 166 1 293 256 37 112 chr5 75308264 75308343 -124321807 + LTR33 LTR ERVL 438 521 0 1932 128 8 4 chr5 75308789 75309080 -124321070 - AluSg1 SINE Alu 0 305 14 247 278 22 22 chr5 75309163 75309253 -124320897 + MIR SINE MIR 53 142 -120 426 270 63 26 chr5 75309262 75309451 -124320699 + MIR SINE MIR 8 203 -59 264 220 70 40 chr5 75309465 75309565 -124320585 + MIR SINE MIR 160 262 0 480 287 26 43 chr5 75311114 75311344 -124318806 + MIR SINE MIR 21 246 -16 514 289 46 5 chr5 75311647 75311844 -124318306 - L1ME4a LINE L1 -218 5903 5699 1684 193 72 82 chr5 75311964 75312634 -124317516 - L1ME4a LINE L1 -1278 4868 4206 1265 239 24 9 chr5 75312612 75312946 -124317204 - L1ME2 LINE L1 -290 5874 5536 * 610 327 107 24 chr5 75313077 75313490 -124316660 + L2 LINE L2 2867 3313 0 216 122 0 0 chr5 75313772 75313813 -124316337 + (CA)n Simple_repeat Simple_repeat 1 41 0 844 201 171 11 chr5 75313888 75313951 -124316199 - MER33 DNA MER1_type -2279 306 254 2273 98 34 0 chr5 75313951 75314248 -124315902 + AluSg SINE Alu 1 307 -3 844 201 171 11 chr5 75314248 75314447 -124315703 - MER33 DNA MER1_type -2331 254 2 318 26 0 0 chr5 75314834 75314873 -124315277 + (TG)n Simple_repeat Simple_repeat 2 40 0 952 139 12 6 chr5 75314956 75315121 -124315029 + MER5A DNA MER1_type 1 166 -23 2252 100 3 0 chr5 75315756 75316045 -124314105 - AluSg1 SINE Alu -15 294 5 25 31 0 0 chr5 75316281 75316313 -124313837 + AT_rich Low_complexity Low_complexity 1 32 0 1368 166 38 64 chr5 75316313 75316578 -124313572 - AluJo SINE Alu -54 258 1 825 139 12 94 chr5 75316634 75316878 -124313272 - L1MB3 LINE L1 -2 6181 5958 1662 106 106 11 chr5 75317103 75317377 -124312773 + AluSq SINE Alu 1 300 -13 1214 94 0 6 chr5 75317393 75317573 -124312577 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 604 204 41 27 chr5 75317681 75317828 -124312322 - MER104 DNA Tc2 -2 178 30 360 140 0 0 chr5 75318059 75318116 -124312034 + AluJ/FLAM SINE Alu 1 57 -245 415 331 98 45 chr5 75318297 75318891 -124311259 - L2 LINE L2 0 3313 2648 387 0 0 0 chr5 75318891 75318934 -124311216 + (TG)n Simple_repeat Simple_repeat 2 44 0 415 331 98 45 chr5 75318934 75319241 -124310909 - L2 LINE L2 -665 2648 2359 198 263 20 61 chr5 75319369 75319468 -124310682 + MIR SINE MIR 118 212 -50 829 266 103 26 chr5 75320767 75321038 -124309112 - LTR16C LTR ERVL 0 491 200 235 308 117 0 chr5 75321514 75321634 -124308516 - L2 LINE L2 -1 3312 3179 228 348 52 13 chr5 75321704 75321826 -124308324 + L2 LINE L2 3153 3284 -29 1627 169 58 140 chr5 75321826 75322417 -124307733 + MLT1F LTR MaLR 1 542 0 228 348 52 13 chr5 75322417 75322449 -124307701 + L2 LINE L2 3284 3313 0 1559 107 9 9 chr5 75322794 75323018 -124307132 + AluSg/x SINE Alu 83 306 -4 241 300 17 33 chr5 75323296 75323416 -124306734 + L2 LINE L2 2978 3095 -177 347 179 90 60 chr5 75323969 75324103 -124306047 + L1ME4a LINE L1 5962 6099 -22 1016 153 11 17 chr5 75324105 75324282 -124305868 - AluJb SINE Alu -6 306 131 288 280 0 45 chr5 75325991 75326123 -124304027 - LTR16C LTR ERVL -11 480 355 236 234 0 0 chr5 75326355 75326402 -124303748 - MER5B DNA MER1_type -45 133 87 456 269 38 6 chr5 75326584 75326744 -124303406 + MIR SINE MIR 84 248 -14 2680 137 26 7 chr5 75327265 75327682 -124302468 - MSTA LTR MaLR 0 428 4 371 21 21 0 chr5 75327834 75327882 -124302268 + (CA)n Simple_repeat Simple_repeat 2 50 0 241 316 188 0 chr5 75328508 75328641 -124301509 - MIR3 SINE MIR -16 192 35 2471 46 10 7 chr5 75329101 75329403 -124300747 + AluY SINE Alu 4 306 -5 275 154 39 51 chr5 75329491 75329569 -124300581 + MIR SINE MIR 44 120 -88 252 345 21 35 chr5 75329671 75329816 -124300334 + MIR SINE MIR 3 145 -63 781 158 7 46 chr5 75330398 75330550 -124299600 - Tigger2a DNA MER2_type -288 146 1 274 314 12 12 chr5 75331009 75331095 -124299055 + L2 LINE L2 3187 3272 0 570 251 35 91 chr5 75331178 75331225 -124298925 - L1ME LINE L1 -299 5822 5774 2081 113 65 0 chr5 75331225 75331517 -124298633 - AluSx SINE Alu -1 311 1 570 251 35 91 chr5 75331517 75331756 -124298394 - L1ME LINE L1 -347 5774 5552 255 170 0 0 chr5 75331878 75331925 -124298225 + (TG)n Simple_repeat Simple_repeat 2 48 0 908 285 73 13 chr5 75332545 75333074 -124297076 - L2 LINE L2 -4 3309 2755 1250 136 30 118 chr5 75333793 75334124 -124296026 - AluYb8 SINE Alu -16 302 1 388 221 271 0 chr5 75334540 75334662 -124295488 + HAL1 LINE L1 537 691 -1816 304 269 127 22 chr5 75334674 75334808 -124295342 + HAL1 LINE L1 744 891 -1616 2229 111 7 7 chr5 75334914 75335221 -124294929 + AluSx SINE Alu 1 307 -5 374 173 67 0 chr5 75335326 75335401 -124294749 + MER116 DNA Mariner 1 80 0 232 242 11 21 chr5 75335643 75335738 -124294412 - HAL1 LINE L1 -1414 1093 1000 981 113 0 60 chr5 75336038 75336189 -124293961 - AluJo SINE Alu -170 142 1 368 352 16 0 chr5 75337269 75337394 -124292756 - L1MEd LINE L1 -5466 653 527 423 0 0 0 chr5 75337904 75337951 -124292199 + (TA)n Simple_repeat Simple_repeat 2 48 0 226 301 65 13 chr5 75338214 75338367 -124291783 + L2 LINE L2 2996 3156 -157 229 352 0 0 chr5 75338381 75338489 -124291661 + MIR SINE MIR 58 165 -97 618 269 113 70 chr5 75338655 75339027 -124291123 + MLT1H LTR MaLR 100 487 -62 327 220 20 20 chr5 75339351 75339451 -124290699 - MIR SINE MIR -88 174 75 204 346 8 39 chr5 75339937 75340067 -124290083 + MIR SINE MIR 18 143 -65 577 254 81 30 chr5 75340263 75340499 -124289651 + MIR SINE MIR 13 260 -2 767 82 82 82 chr5 75340663 75340797 -124289353 - LTR2B LTR ERV1 -356 134 1 227 83 56 0 chr5 75342862 75342898 -124287252 - Alu SINE Alu -262 38 1 226 135 77 39 chr5 75342865 75342917 -124287233 - AluSg/x SINE Alu -132 168 115 * 575 260 24 12 chr5 75343660 75343829 -124286321 + MIR SINE MIR 35 205 -57 240 286 83 30 chr5 75344241 75344374 -124285776 - L2 LINE L2 -15 3298 3159 2285 180 84 2 chr5 75344441 75344907 -124285243 + L1MB3 LINE L1 5680 6183 0 2216 99 3 3 chr5 75344911 75345203 -124284947 - AluSg SINE Alu -18 292 1 1611 74 10 0 chr5 75345564 75345766 -124284384 + AluY SINE Alu 108 311 0 309 73 0 0 chr5 75345798 75345839 -124284311 - MADE1 DNA Mariner -39 41 1 * 1290 218 45 8 chr5 75345839 75346145 -124284005 - MLT1A1 LTR MaLR -43 347 2 302 231 83 50 chr5 75348204 75348325 -124281825 + MLT1L LTR MaLR 110 234 -381 397 292 84 6 chr5 75348457 75348635 -124281515 + MLT1L LTR MaLR 423 614 -1 1222 167 93 58 chr5 75348682 75348993 -124281157 - MER33 DNA MER1_type 0 324 3 378 0 0 0 chr5 75350656 75350698 -124279452 + (TG)n Simple_repeat Simple_repeat 1 42 0 814 115 0 9 chr5 75351008 75351121 -124279029 + FLAM_A SINE Alu 13 124 -18 856 155 81 7 chr5 75351707 75351855 -124278295 - MER7A DNA MER2_type -189 157 1 246 305 0 0 chr5 75352629 75352688 -124277462 + MIR SINE MIR 30 88 -120 189 273 18 91 chr5 75353025 75353135 -124277015 - MIR SINE MIR -50 212 111 230 0 33 0 chr5 75353722 75353752 -124276398 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 22 80 0 0 chr5 75353862 75353912 -124276238 + AT_rich Low_complexity Low_complexity 1 50 0 316 248 11 14 chr5 75354655 75354771 -124275379 + MLT1L LTR MaLR 98 273 -299 343 246 82 41 chr5 75355871 75355993 -124274157 + MIR SINE MIR 111 237 -25 181 244 24 0 chr5 75355962 75356003 -124274147 + L2 LINE L2 3218 3259 -13 * 2835 7 0 0 chr5 75356003 75356302 -124273848 + AluY SINE Alu 1 299 -12 274 313 36 0 chr5 75358256 75358339 -124271811 + MER5A DNA MER1_type 96 181 -8 25 0 0 0 chr5 75359393 75359418 -124270732 + AT_rich Low_complexity Low_complexity 1 25 0 256 314 105 9 chr5 75359751 75359856 -124270294 + MER91C DNA MER1_type 26 140 0 1825 150 40 0 chr5 75360356 75360656 -124269494 + AluSx SINE Alu 1 312 0 1785 164 14 0 chr5 75360686 75360979 -124269171 - AluJb SINE Alu -9 303 7 1471 267 73 66 chr5 75360987 75361575 -124268575 - MLT1E LTR MaLR 0 593 2 201 237 175 44 chr5 75361576 75361690 -124268460 + MIR SINE MIR 119 247 -15 218 264 100 55 chr5 75361812 75361922 -124268228 - MIR3 SINE MIR -87 121 7 442 195 132 23 chr5 75362022 75362196 -124267954 - Charlie7 DNA MER1_type -5 2607 2415 868 278 88 61 chr5 75362249 75362792 -124267358 - Charlie7 DNA MER1_type -1977 635 78 194 384 0 0 chr5 75363353 75363426 -124266724 + L2 LINE L2 2694 2766 -548 681 259 23 36 chr5 75363429 75363701 -124266449 + MER113 DNA MER1_type? 3 348 -173 1659 153 3 30 chr5 75363701 75364001 -124266149 - AluJb SINE Alu -10 302 11 681 259 23 36 chr5 75364001 75364173 -124265977 + MER113 DNA MER1_type? 348 521 0 269 205 71 45 chr5 75364669 75364781 -124265369 - MLT1L LTR MaLR -500 115 1 375 240 74 25 chr5 75364951 75365072 -124265078 + L2 LINE L2 3146 3272 0 198 0 0 0 chr5 75365501 75365523 -124264627 + (CA)n Simple_repeat Simple_repeat 1 22 0 1931 151 0 0 chr5 75365790 75366089 -124264061 - AluSx SINE Alu -13 299 1 242 212 0 30 chr5 75366786 75366852 -124263298 + (TG)n Simple_repeat Simple_repeat 1 64 0 718 91 0 10 chr5 75366905 75367004 -124263146 + AluS SINE Alu 3 100 -213 1672 78 0 0 chr5 75367456 75367673 -124262477 - AluSc SINE Alu -7 302 86 326 333 64 13 chr5 75367783 75367939 -124262211 + MIR SINE MIR 27 190 -72 205 339 34 0 chr5 75368241 75368300 -124261850 - MIR SINE MIR 0 262 202 721 244 25 89 chr5 75369219 75369657 -124260493 + L1MDa LINE L1 1313 1722 -4818 200 33 0 33 chr5 75370882 75370912 -124259238 + (TTTTC)n Simple_repeat Simple_repeat 1 29 0 351 259 89 9 chr5 75371472 75371584 -124258566 - L2 LINE L2 0 3313 3193 1976 236 111 16 chr5 75372169 75372681 -124257469 - MLT1F1 LTR MaLR 0 567 7 203 77 0 26 chr5 75372710 75372749 -124257401 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 1321 159 3 95 chr5 75372749 75372910 -124257240 - AluJo SINE Alu -32 280 157 2198 75 7 7 chr5 75372910 75373203 -124256947 + AluY SINE Alu 1 293 -18 1321 159 3 95 chr5 75373203 75373337 -124256813 - AluJo SINE Alu -155 157 12 470 260 120 31 chr5 75374300 75374492 -124255658 + MIR SINE MIR 2 210 -52 376 258 69 50 chr5 75375071 75375230 -124254920 - MIR SINE MIR -95 167 6 198 237 17 34 chr5 75375747 75375806 -124254344 - L2 LINE L2 -5 3308 3251 198 268 198 0 chr5 75375872 75376029 -124254121 - L2 LINE L2 -195 3077 2890 217 158 26 0 chr5 75376516 75376554 -124253596 + MIR SINE MIR 95 133 -75 214 196 0 36 chr5 75376712 75376768 -124253382 + (CTCA)n Simple_repeat Simple_repeat 1 54 0 367 325 7 53 chr5 75377375 75377526 -124252624 + MIR3 SINE MIR 64 207 -1 941 273 88 42 chr5 75377795 75378250 -124251900 - MLT1H LTR MaLR -1 548 73 365 241 93 9 chr5 75378861 75378969 -124251181 - MIR SINE MIR -108 154 38 365 237 21 21 chr5 75379091 75379184 -124250966 + MER5A DNA MER1_type 12 104 -85 508 296 90 40 chr5 75379240 75379463 -124250687 + MIR SINE MIR 18 251 -11 213 196 0 0 chr5 75379554 75379600 -124250550 + (CA)n Simple_repeat Simple_repeat 2 47 0 372 232 164 40 chr5 75380162 75380339 -124249811 - MIR SINE MIR 0 262 64 216 135 0 0 chr5 75381258 75381295 -124248855 + (CA)n Simple_repeat Simple_repeat 1 37 0 1996 87 13 26 chr5 75381518 75381828 -124248322 + L1MA5A LINE L1 5992 6297 0 344 286 71 16 chr5 75381848 75382030 -124248120 + MLT1J LTR MaLR 320 511 0 660 262 46 46 chr5 75382053 75382290 -124247860 + L2 LINE L2 3077 3313 0 242 315 54 11 chr5 75382458 75382550 -124247600 - L2 LINE L2 -19 3294 3199 39 0 0 0 chr5 75382795 75382834 -124247316 + AT_rich Low_complexity Low_complexity 1 39 0 30 27 0 0 chr5 75384809 75384846 -124245304 + AT_rich Low_complexity Low_complexity 1 37 0 185 154 26 0 chr5 75385517 75385556 -124244594 + CT-rich Low_complexity Low_complexity 3 42 0 246 128 0 0 chr5 75385556 75385595 -124244555 + (CCG)n Simple_repeat Simple_repeat 2 40 0 190 281 22 56 chr5 75385791 75385880 -124244270 + MIR SINE MIR 147 232 -30 322 338 12 25 chr5 75386187 75386347 -124243803 - L2 LINE L2 -244 3028 2871 227 269 0 0 chr5 75386593 75386645 -124243505 + MLT1L LTR MaLR 343 394 -221 334 258 11 34 chr5 75386910 75386999 -124243151 - MIR SINE MIR -121 141 55 186 320 133 13 chr5 75388350 75388425 -124241725 + L2 LINE L2 3179 3262 -10 287 315 185 22 chr5 75389331 75389515 -124240635 + MIR SINE MIR 21 234 -28 896 236 83 91 chr5 75389690 75390172 -124239978 - MLT1J LTR MaLR 0 511 34 618 183 8 17 chr5 75390797 75390917 -124239233 - MLT1F LTR MaLR 0 542 424 408 20 0 0 chr5 75391075 75391124 -124239026 + (CA)n Simple_repeat Simple_repeat 1 49 0 283 220 93 67 chr5 75391794 75391944 -124238206 - L1ME4a LINE L1 0 6121 5968 790 274 57 38 chr5 75392300 75392669 -124237481 - L1ME4a LINE L1 -203 5918 5543 259 314 156 25 chr5 75392953 75393268 -124236882 - L1MC4a LINE L1 -1878 5930 5575 347 148 0 0 chr5 75393401 75393462 -124236688 + AluSc SINE Alu 239 299 0 543 320 98 0 chr5 75393466 75393660 -124236490 + MIR SINE MIR 28 240 -22 247 269 0 0 chr5 75393710 75393777 -124236373 + MLT1L LTR MaLR 1 67 -548 434 261 58 106 chr5 75393846 75393926 -124236224 + MLT1L LTR MaLR 202 284 -331 1085 161 199 48 chr5 75393926 75394298 -124235852 - MSTC LTR MaLR 0 428 1 434 261 58 106 chr5 75394298 75394443 -124235707 + MLT1L LTR MaLR 284 416 -199 284 368 35 0 chr5 75395038 75395152 -124234998 + L2 LINE L2 3155 3272 0 287 358 45 34 chr5 75395225 75395404 -124234746 + MIR SINE MIR 4 184 -78 5845 110 9 10 chr5 75395613 75397492 -124232658 - L1PA16 LINE L1 0 6166 4281 315 290 237 18 chr5 75397493 75397662 -124232488 + HAL1 LINE L1 139 344 -2163 2812 128 12 16 chr5 75397689 75398119 -124232031 - MSTA LTR MaLR 0 428 1 294 169 0 0 chr5 75398148 75398213 -124231937 + (CCA)n Simple_repeat Simple_repeat 1 65 0 184 184 26 0 chr5 75398363 75398401 -124231749 + L2 LINE L2 2934 2972 -342 701 261 5 27 chr5 75398966 75399150 -124231000 + MIR SINE MIR 13 192 -70 1145 201 42 0 chr5 75399503 75399717 -124230433 + MER58A DNA MER1_type 1 223 -1 283 303 172 7 chr5 75400194 75400339 -124229811 + L2 LINE L2 2684 2852 -462 254 392 29 23 chr5 75400417 75400588 -124229562 + L2 LINE L2 2926 3097 -175 256 231 46 28 chr5 75400839 75400947 -124229203 + MER113 DNA MER1_type? 90 199 -322 708 318 37 12 chr5 75401085 75401327 -124228823 + MIR SINE MIR 15 262 0 243 244 0 85 chr5 75401384 75401466 -124228684 - L2 LINE L2 -4 3268 3194 806 280 45 26 chr5 75401864 75402128 -124228022 + Charlie8 DNA MER1_type 2 270 -2147 1807 262 102 64 chr5 75402143 75402687 -124227463 + MER115 DNA AcHobo 14 588 -105 2185 92 7 0 chr5 75402687 75402979 -124227171 + AluSp SINE Alu 1 294 -19 1807 262 102 64 chr5 75402979 75403079 -124227071 + MER115 DNA AcHobo 588 683 -10 298 376 11 0 chr5 75403151 75403244 -124226906 + L2 LINE L2 3136 3229 -43 1070 133 12 6 chr5 75403401 75403567 -124226583 + AluJo SINE Alu 1 167 -145 2121 108 3 0 chr5 75404070 75404366 -124225784 + AluSp SINE Alu 1 297 -16 495 230 177 14 chr5 75405021 75405230 -124224920 + MLT1L LTR MaLR 370 612 -3 1327 169 53 60 chr5 75405424 75405708 -124224442 - AluJb SINE Alu -19 293 12 187 375 91 15 chr5 75405799 75406140 -124224010 + L2 LINE L2 2488 2854 -460 1970 133 22 0 chr5 75406454 75406732 -124223418 - AluSx SINE Alu -1 311 28 286 273 15 0 chr5 75406775 75406841 -124223309 + L2 LINE L2 3203 3269 -3 1016 161 32 0 chr5 75407064 75407219 -124222931 - AluJo SINE Alu -30 282 123 910 278 93 14 chr5 75407373 75407729 -124222421 + L2 LINE L2 2930 3313 0 2114 119 0 42 chr5 75407889 75408201 -124221949 + AluSc SINE Alu 1 299 -10 1836 142 7 24 chr5 75408875 75409204 -124220946 + AluSx SINE Alu 2 325 0 889 308 81 3 chr5 75409244 75409578 -124220572 + MER115 DNA AcHobo 7 366 -327 253 275 101 0 chr5 75409633 75409702 -124220448 + MER115 DNA AcHobo 469 544 -149 181 370 14 22 chr5 75410315 75410453 -124219697 + L2 LINE L2 2677 2813 -501 220 369 102 34 chr5 75410510 75410716 -124219434 + L2 LINE L2 2963 3182 -90 415 282 34 43 chr5 75411512 75411629 -124218521 + L2 LINE L2 3157 3272 0 540 272 110 7 chr5 75411693 75411887 -124218263 + MIR SINE MIR 2 211 -51 1861 111 99 40 chr5 75411904 75412256 -124217894 - THE1C LTR MaLR -2 373 1 1900 94 3 52 chr5 75413263 75413570 -124216580 - Tigger2a DNA MER2_type -142 292 1 22 0 0 0 chr5 75413586 75413608 -124216542 + AT_rich Low_complexity Low_complexity 1 22 0 2034 135 3 16 chr5 75413608 75413912 -124216238 + AluSx SINE Alu 2 301 -11 472 107 36 12 chr5 75413913 75413997 -124216153 - Charlie5 DNA MER1_type -73 2539 2454 779 207 51 6 chr5 75414024 75414049 -124216101 - L1MB7 LINE L1 0 6166 6144 1936 141 13 23 chr5 75414049 75414186 -124215964 + AluSx SINE Alu 1 138 -174 2382 82 3 0 chr5 75414186 75414478 -124215672 + AluSp SINE Alu 1 293 -20 1936 141 13 23 chr5 75414478 75414645 -124215505 + AluSx SINE Alu 138 302 -10 779 207 51 6 chr5 75414645 75414816 -124215334 - L1MB7 LINE L1 -22 6144 5965 547 238 15 0 chr5 75414816 75414955 -124215195 - MER33 DNA MER1_type -250 74 1 226 290 0 0 chr5 75416003 75416065 -124214085 - MLT1L LTR MaLR -3 612 551 1421 175 0 41 chr5 75416086 75416332 -124213818 + AluJo SINE Alu 2 237 -75 386 319 115 13 chr5 75416575 75416732 -124213418 + MIR3 SINE MIR 8 180 -28 744 249 158 78 chr5 75416911 75416970 -124213180 - MLT1K LTR MaLR -2 586 533 2190 117 0 25 chr5 75416970 75417286 -124212864 + AluSg SINE Alu 3 310 0 744 249 158 78 chr5 75417286 75417763 -124212387 - MLT1K LTR MaLR -55 533 7 190 288 128 82 chr5 75418407 75418845 -124211305 - L2 LINE L2 -2 3270 2813 2082 274 75 31 chr5 75419281 75420050 -124210100 - L2 LINE L2 -592 2722 1920 268 327 82 0 chr5 75420182 75420292 -124209858 - MIR SINE MIR -10 252 134 2431 130 32 114 chr5 75420347 75420919 -124209231 - L1MB2 LINE L1 -1 6170 5645 1706 153 43 55 chr5 75420919 75421129 -124209021 - MER2 DNA MER2_type 0 344 138 1989 125 19 48 chr5 75421129 75421441 -124208709 + AluSx SINE Alu 1 303 -9 1706 153 43 55 chr5 75421441 75421577 -124208573 - MER2 DNA MER2_type -206 138 2 2431 130 32 114 chr5 75421577 75421589 -124208561 - L1MB2 LINE L1 -526 5645 5634 1834 172 3 3 chr5 75421594 75421897 -124208253 - AluJo SINE Alu -9 303 1 638 358 29 12 chr5 75422276 75422522 -124207628 - MIR SINE MIR -1 261 12 2163 108 6 16 chr5 75422882 75423196 -124206954 - AluSx SINE Alu -1 311 1 654 25 0 0 chr5 75423583 75423663 -124206487 + (TTTC)n Simple_repeat Simple_repeat 3 82 0 1691 178 0 4 chr5 75423663 75423939 -124206211 - AluJo SINE Alu -32 280 6 368 226 137 24 chr5 75424008 75424132 -124206018 - L2 LINE L2 -38 3275 3138 431 154 51 3 chr5 75424659 75424797 -124205353 + MER53 DNA DNA 2 189 0 256 187 200 0 chr5 75424804 75424879 -124205271 - MIR SINE MIR -87 175 86 23 0 0 0 chr5 75425427 75425450 -124204700 + AT_rich Low_complexity Low_complexity 1 23 0 361 259 109 34 chr5 75425496 75425643 -124204507 + MIR SINE MIR 73 230 -32 2017 147 3 3 chr5 75426001 75426308 -124203842 - AluSx SINE Alu -5 307 1 603 346 48 4 chr5 75426316 75426547 -124203603 - MIR SINE MIR -13 249 9 448 288 152 11 chr5 75427551 75427742 -124202408 - MIR SINE MIR -13 249 32 276 326 0 12 chr5 75428199 75428285 -124201865 - L2 LINE L2 -8 3305 3221 213 154 0 0 chr5 75429163 75429202 -124200948 + T-rich Low_complexity Low_complexity 1 39 0 635 288 49 16 chr5 75429411 75429654 -124200496 + MIR SINE MIR 12 262 0 191 250 103 0 chr5 75429847 75429915 -124200235 + MIR SINE MIR 131 205 -57 566 231 21 28 chr5 75429932 75430075 -124200075 - MIR SINE MIR -50 212 71 733 260 76 5 chr5 75430660 75431120 -124199030 - LTR33 LTR ERVL -1 520 8 265 314 114 19 chr5 75431546 75431651 -124198499 + L2 LINE L2 3191 3305 -8 490 188 52 27 chr5 75431686 75431838 -124198312 - MIR SINE MIR -5 257 100 289 265 30 91 chr5 75432447 75432490 -124197660 - MIR SINE MIR -78 184 140 2166 118 14 0 chr5 75432490 75432786 -124197364 - AluSx SINE Alu -12 300 1 289 265 30 91 chr5 75432786 75432874 -124197276 - MIR SINE MIR -122 140 61 435 280 42 0 chr5 75433151 75433269 -124196881 - MLT1I LTR MaLR -188 221 99 470 293 0 63 chr5 75433341 75433482 -124196668 - MIR SINE MIR -93 169 39 1293 200 18 0 chr5 75433482 75433702 -124196448 - MER58A DNA MER1_type 0 224 1 470 293 0 63 chr5 75433702 75433734 -124196416 - MIR SINE MIR -223 39 7 25 65 0 0 chr5 75434390 75434436 -124195714 + AT_rich Low_complexity Low_complexity 1 46 0 343 317 29 0 chr5 75434557 75434661 -124195489 + MIR SINE MIR 72 178 -84 327 256 18 89 chr5 75435188 75435356 -124194794 - MIR3 SINE MIR -15 193 38 414 283 0 3 chr5 75435668 75435785 -124194365 + MIR SINE MIR 53 167 -41 387 301 92 20 chr5 75436104 75436257 -124193893 + MER5B DNA MER1_type 1 164 -14 378 179 119 0 chr5 75436442 75436526 -124193624 - MER5A DNA MER1_type -90 99 6 322 353 67 33 chr5 75436696 75436846 -124193304 - L2 LINE L2 -219 3053 2899 297 308 105 15 chr5 75439667 75439800 -124190350 + L2 LINE L2 2566 2710 -604 301 222 25 0 chr5 75439802 75439883 -124190267 + MLT1K LTR MaLR 154 236 -352 362 316 0 0 chr5 75439888 75440005 -124190145 - MIR SINE MIR 0 262 146 195 42 0 0 chr5 75440910 75440934 -124189216 + (T)n Simple_repeat Simple_repeat 1 24 0 850 223 30 0 chr5 75441090 75441256 -124188894 + MER5A DNA MER1_type 13 183 -6 616 296 71 66 chr5 75441334 75441757 -124188393 - MLT1L LTR MaLR -190 425 1 272 252 213 11 chr5 75441757 75441877 -124188273 - MIR SINE MIR -62 146 16 566 303 34 74 chr5 75442007 75442331 -124187819 + MER102a DNA MER1_type 2 312 -18 2384 158 46 10 chr5 75442892 75443140 -124187010 - MSTB LTR MaLR 0 426 156 1654 174 17 7 chr5 75443140 75443428 -124186722 + AluJb SINE Alu 16 306 -6 2384 158 46 10 chr5 75443428 75443590 -124186560 - MSTB LTR MaLR -270 156 1 437 303 207 5 chr5 75443872 75444182 -124185968 - L2 LINE L2 -182 3090 2712 379 318 172 41 chr5 75444260 75444603 -124185547 + L2 LINE L2 2383 2770 -544 916 287 140 17 chr5 75444735 75445206 -124184944 - MLT1G1 LTR MaLR 0 595 15 195 213 93 80 chr5 75445220 75445295 -124184855 + L2 LINE L2 3235 3310 -3 180 77 0 0 chr5 75445295 75445321 -124184829 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1727 121 4 66 chr5 75445329 75445602 -124184548 - AluSq SINE Alu -57 256 1 339 197 25 148 chr5 75445738 75445860 -124184290 + MIR SINE MIR 84 190 -72 185 132 26 0 chr5 75446695 75446733 -124183417 + GA-rich Low_complexity Low_complexity 3 41 0 271 141 35 24 chr5 75447217 75447302 -124182848 + GA-rich Low_complexity Low_complexity 1 86 0 349 252 207 0 chr5 75447411 75447522 -124182628 + L2 LINE L2 3137 3270 -2 239 300 90 0 chr5 75448083 75448183 -124181967 - L2 LINE L2 -18 3254 3146 599 299 101 19 chr5 75448220 75448427 -124181723 - MIR SINE MIR -6 256 33 456 154 123 69 chr5 75448604 75448734 -124181416 + MIR3 SINE MIR 10 146 -62 576 295 34 24 chr5 75449161 75449368 -124180782 - MIR SINE MIR -2 260 52 1949 141 6 52 chr5 75449466 75449792 -124180358 + AluJo SINE Alu 1 311 -1 292 292 109 113 chr5 75449803 75450029 -124180121 - L2 LINE L2 0 3272 3046 2545 70 0 6 chr5 75450029 75450341 -124179809 + AluY SINE Alu 1 310 -1 292 292 109 113 chr5 75450341 75450409 -124179741 - L2 LINE L2 -226 3046 2979 1221 176 19 9 chr5 75450409 75450625 -124179525 - MER20 DNA MER1_type -1 218 1 292 292 109 113 chr5 75450625 75450761 -124179389 - L2 LINE L2 -293 2979 2843 223 261 14 43 chr5 75450800 75450869 -124179281 - L2 LINE L2 -8 3305 3239 436 221 44 35 chr5 75451773 75451886 -124178264 + MER81 DNA DNA 1 114 0 224 170 43 0 chr5 75451990 75452037 -124178113 - L2 LINE L2 0 3272 3224 1870 170 25 22 chr5 75452598 75452962 -124177188 + MLT1A1 LTR MaLR 1 365 0 1307 220 29 68 chr5 75453209 75453664 -124176486 - MER113 DNA MER1_type? -77 444 8 658 245 130 23 chr5 75454108 75454324 -124175826 - MIR SINE MIR -2 260 22 258 128 0 0 chr5 75454430 75454469 -124175681 - L2 LINE L2 -3 3310 3272 274 291 99 64 chr5 75454661 75454802 -124175348 + MIR SINE MIR 47 192 -70 814 145 67 17 chr5 75455032 75455211 -124174939 - Tigger2 DNA MER2_type -11 2707 2520 280 306 105 40 chr5 75655796 75655920 -123974230 - L2 LINE L2 -13 3259 3128 1995 123 53 0 chr5 75656264 75656549 -123973601 - AluSx SINE Alu -12 300 1 515 286 32 40 chr5 75658176 75658428 -123971722 - Charlie8 DNA MER1_type -2142 275 26 1819 142 8 0 chr5 75658941 75659209 -123970941 - AluSx SINE Alu -42 270 1 21 36 0 0 chr5 75659558 75659586 -123970564 + AT_rich Low_complexity Low_complexity 1 28 0 414 216 14 108 chr5 75660195 75660334 -123969816 + MER5A DNA MER1_type 63 188 -1 416 288 103 16 chr5 75661412 75661596 -123968554 + MIR SINE MIR 20 219 -43 916 152 0 20 chr5 75661683 75661834 -123968316 - AluSx SINE Alu -6 306 159 606 158 30 0 chr5 75661841 75661942 -123968208 - AluSx SINE Alu -209 104 1 195 184 0 0 chr5 75662051 75662089 -123968061 + GA-rich Low_complexity Low_complexity 3 40 0 41 21 0 0 chr5 75663031 75663079 -123967071 + AT_rich Low_complexity Low_complexity 1 48 0 2176 117 3 3 chr5 75663127 75663427 -123966723 + AluSq SINE Alu 1 300 -13 34 79 0 0 chr5 75663937 75664013 -123966137 + AT_rich Low_complexity Low_complexity 1 76 0 319 147 7 67 chr5 75664018 75664319 -123965831 + (TA)n Simple_repeat Simple_repeat 1 282 0 2340 112 0 0 chr5 75665277 75665589 -123964561 + AluSx SINE Alu 1 312 0 301 67 0 67 chr5 75665879 75665954 -123964196 + (TA)n Simple_repeat Simple_repeat 1 70 0 330 191 22 34 chr5 75665955 75666044 -123964106 - L1MC4 LINE L1 -1341 6701 6614 482 81 0 91 chr5 75666045 75666243 -123963907 + (TA)n Simple_repeat Simple_repeat 1 180 0 2902 181 48 14 chr5 75666589 75667237 -123962913 - L1MC3 LINE L1 -1087 6698 6029 437 170 64 0 chr5 75667246 75667340 -123962810 + L1MC3 LINE L1 6866 6965 -820 201 154 0 0 chr5 75668400 75668439 -123961711 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 1771 157 28 14 chr5 75669795 75670082 -123960068 - AluJo SINE Alu -21 291 1 290 339 136 0 chr5 75670255 75670373 -123959777 + MIR SINE MIR 48 181 -81 458 219 245 13 chr5 75670983 75671138 -123959012 + MIR SINE MIR 67 257 -5 2124 113 14 0 chr5 75671628 75671921 -123958229 - AluSx SINE Alu -15 297 1 240 303 0 0 chr5 75671973 75672039 -123958111 + L2 LINE L2 3207 3272 0 2082 311 169 17 chr5 75672181 75673437 -123956713 - L2 LINE L2 0 3313 1848 1107 202 64 0 chr5 75674568 75674801 -123955349 - MIR SINE MIR -2 260 13 324 115 49 33 chr5 75675164 75675225 -123954925 - U7 snRNA snRNA -1 62 1 650 230 11 0 chr5 75675736 75675914 -123954236 + CT-rich Low_complexity Low_complexity 1 180 0 181 29 29 57 chr5 75675923 75675958 -123954192 + (TTTCC)n Simple_repeat Simple_repeat 1 34 0 1981 156 0 19 chr5 75675958 75676273 -123953877 - AluJb SINE Alu -2 310 2 562 216 155 105 chr5 75676328 75676537 -123953613 - MER113 DNA MER1_type? -54 467 270 2265 88 3 10 chr5 75676537 75676832 -123953318 - AluSc SINE Alu -16 293 1 562 216 155 105 chr5 75676832 75677061 -123953089 - MER113 DNA MER1_type? -251 270 7 1034 264 40 15 chr5 75677097 75677423 -123952727 - MER46C DNA MER2_type -1 337 4 2510 71 3 3 chr5 75677424 75677735 -123952415 + AluY SINE Alu 1 311 0 207 344 33 22 chr5 75678196 75678286 -123951864 - L2 LINE L2 -213 3059 2969 308 293 25 32 chr5 75678574 75678731 -123951419 - MLT1K LTR MaLR -290 298 143 325 303 76 8 chr5 75680328 75680460 -123949690 + MIR SINE MIR 30 170 -92 296 283 123 14 chr5 75680564 75680702 -123949448 + MIR SINE MIR 83 235 -27 210 154 0 0 chr5 75681116 75681155 -123948995 + A-rich Low_complexity Low_complexity 1 39 0 235 287 83 19 chr5 75681902 75682010 -123948140 + L2 LINE L2 3158 3272 0 386 213 12 0 chr5 75682017 75682097 -123948053 + MIR3 SINE MIR 128 208 0 339 258 6 115 chr5 75682753 75682888 -123947262 - L1MC4 LINE L1 -29 8013 7901 189 0 0 0 chr5 75682888 75682909 -123947241 + (TA)n Simple_repeat Simple_repeat 1 21 0 339 258 6 115 chr5 75682909 75682955 -123947195 - L1MC4 LINE L1 -141 7901 7852 30 77 0 0 chr5 75683925 75683990 -123946160 + AT_rich Low_complexity Low_complexity 1 65 0 327 111 37 0 chr5 75686101 75686155 -123943995 - Alu SINE Alu -3 299 244 2168 153 73 13 chr5 75686258 75686708 -123943442 + L1MC3 LINE L1 6966 7442 -343 313 134 30 0 chr5 75686718 75686785 -123943365 + L1MC3 LINE L1 7535 7603 -182 26 0 0 0 chr5 75686809 75686835 -123943315 + AT_rich Low_complexity Low_complexity 1 26 0 2108 131 16 3 chr5 75687243 75687549 -123942601 - AluJo SINE Alu -2 310 1 441 0 0 0 chr5 75688432 75688481 -123941669 + (CA)n Simple_repeat Simple_repeat 2 50 0 2545 58 0 3 chr5 75689875 75690187 -123939963 - AluY SINE Alu 0 311 1 180 158 0 0 chr5 75690687 75690725 -123939425 + T-rich Low_complexity Low_complexity 1 38 0 400 239 84 0 chr5 75691189 75691331 -123938819 + L1ME4a LINE L1 5964 6117 -4 2011 116 7 14 chr5 75692254 75692547 -123937603 - AluSx SINE Alu -21 291 1 1652 88 27 11 chr5 75693005 75693267 -123936883 + L1MA1 LINE L1 6037 6302 0 452 250 79 7 chr5 75693363 75693503 -123936647 - MER3 DNA MER1_type -58 151 2 1851 129 65 0 chr5 75693669 75693947 -123936203 + AluSq SINE Alu 1 296 -17 186 133 0 0 chr5 75695631 75695661 -123934489 + (A)n Simple_repeat Simple_repeat 1 30 0 577 239 42 30 chr5 75696224 75696391 -123933759 - MIR SINE MIR -10 252 84 2183 106 3 3 chr5 75696769 75697070 -123933080 - AluSp SINE Alu -12 301 1 1984 130 76 17 chr5 75698718 75699072 -123931078 - THE1C LTR MaLR 0 375 1 3010 122 40 4 chr5 75699123 75699622 -123930528 - L1MA9 LINE L1 0 6312 5796 357 62 0 0 chr5 75699622 75699670 -123930480 + (TG)n Simple_repeat Simple_repeat 1 48 0 1778 161 35 0 chr5 75699689 75700006 -123930144 + MER7A DNA MER2_type 21 346 0 3895 157 57 25 chr5 75700011 75700265 -123929885 + MER21B LTR ERV1 62 306 -557 2565 44 3 0 chr5 75700265 75700560 -123929590 + AluY SINE Alu 1 296 -15 3895 157 57 25 chr5 75700560 75701062 -123929088 + MER21B LTR ERV1 306 842 -21 3984 162 35 36 chr5 75701095 75701566 -123928584 - L1MA9 LINE L1 -503 5788 5318 183 100 0 0 chr5 75701566 75701596 -123928554 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3984 162 35 36 chr5 75701596 75702552 -123927598 - L1MA9 LINE L1 -973 5318 4378 209 100 50 0 chr5 75702761 75702801 -123927349 + CT-rich Low_complexity Low_complexity 3 44 0 1988 154 10 6 chr5 75702803 75703114 -123927036 - AluSx SINE Alu 0 312 1 2758 193 53 66 chr5 75703625 75704442 -123925708 - L1MC4 LINE L1 -46 7996 7191 1630 115 13 4 chr5 75705216 75705451 -123924699 - AluSx SINE Alu -36 276 40 523 255 38 16 chr5 75706031 75706215 -123923935 + L1ME3A LINE L1 5428 5615 -549 304 226 177 44 chr5 75706259 75706440 -123923710 + L1ME3A LINE L1 5732 5936 -234 1932 161 7 0 chr5 75706501 75706806 -123923344 + AluSx SINE Alu 1 307 -5 28 48 0 0 chr5 75706996 75707038 -123923112 + AT_rich Low_complexity Low_complexity 1 42 0 1909 142 0 26 chr5 75707774 75708084 -123922066 + AluSx SINE Alu 1 302 -10 299 220 99 0 chr5 75709144 75709235 -123920915 + MER112 DNA MER1_type 128 227 -33 2399 89 3 0 chr5 75710202 75710505 -123919645 - AluY SINE Alu -7 304 1 1830 156 30 3 chr5 75710904 75711206 -123918944 + AluJb SINE Alu 3 312 0 204 40 0 0 chr5 75712220 75712245 -123917905 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 21 0 0 0 chr5 75712520 75712541 -123917609 + AT_rich Low_complexity Low_complexity 1 21 0 243 224 79 0 chr5 75714816 75714892 -123915258 - L1ME3A LINE L1 -5 6165 6084 22 35 0 0 chr5 75715011 75715040 -123915110 + AT_rich Low_complexity Low_complexity 1 29 0 226 264 38 0 chr5 75715344 75715397 -123914753 + L2 LINE L2 3255 3309 -4 325 218 13 0 chr5 75718868 75718946 -123911204 - MIR SINE MIR 0 262 184 31 0 0 0 chr5 75719048 75719079 -123911071 + AT_rich Low_complexity Low_complexity 1 31 0 2153 117 0 3 chr5 75719739 75720037 -123910113 + AluSx SINE Alu 1 297 -15 24 0 0 0 chr5 75720550 75720574 -123909576 + AT_rich Low_complexity Low_complexity 1 24 0 2237 114 0 0 chr5 75720640 75720937 -123909213 + AluSq SINE Alu 1 297 -16 232 310 0 35 chr5 75721751 75721838 -123908312 - MIR3 SINE MIR -18 190 107 258 192 0 0 chr5 75722537 75722589 -123907561 + (CA)n Simple_repeat Simple_repeat 2 53 0 1751 238 200 16 chr5 75723395 75724266 -123905884 + L2 LINE L2 2266 3313 0 190 433 27 0 chr5 75725577 75725727 -123904423 + L2 LINE L2 2554 2707 -607 959 147 0 0 chr5 75726450 75726593 -123903557 - AluSg/x SINE Alu -35 277 135 316 269 70 13 chr5 75726634 75726790 -123903360 - L1ME LINE L1 -344 5777 5613 361 263 137 65 chr5 75727172 75727434 -123902716 - L1ME LINE L1 -3666 2480 2200 365 310 27 22 chr5 75727987 75728171 -123901979 - HAL1b LINE L1 -820 528 344 923 214 5 0 chr5 75730161 75730348 -123899802 - MER5A DNA MER1_type -1 188 1 393 297 172 20 chr5 75731535 75731838 -123898312 - HsTC2 DNA Tc2 -1055 843 495 275 232 51 65 chr5 75731977 75732115 -123898035 - HsTC2 DNA Tc2 -1760 138 3 2141 117 0 0 chr5 75733658 75733949 -123896201 - AluSx SINE Alu -21 291 1 2254 92 7 3 chr5 75734628 75734921 -123895229 + AluSx SINE Alu 1 294 -18 428 284 35 36 chr5 75735246 75735395 -123894755 + MIR SINE MIR 4 150 -62 245 152 0 0 chr5 75735395 75735441 -123894709 - MADE1 DNA Mariner -34 46 1 221 273 35 77 chr5 75736232 75736375 -123893775 + MIR SINE MIR 93 229 -33 1892 149 27 10 chr5 75736607 75737473 -123892677 - L1MB7 LINE L1 -19 6165 5173 394 220 127 17 chr5 75738376 75738494 -123891656 + L2 LINE L2 3180 3310 -3 2930 177 38 1 chr5 75738727 75739395 -123890755 - L1MC/D LINE L1 -548 5811 5099 42476 38 0 2 chr5 75739415 75745572 -123884578 - L1PA3 LINE L1 0 6155 12 1517 237 92 39 chr5 75745568 75745654 -123884496 - L1MC/D LINE L1 -1036 5110 5030 * 1851 152 3 17 chr5 75745654 75745951 -123884199 + AluJb SINE Alu 2 294 -18 1517 237 92 39 chr5 75745951 75746557 -123883593 - L1MC/D LINE L1 -1116 5030 4381 21 0 0 0 chr5 75747303 75747324 -123882826 + AT_rich Low_complexity Low_complexity 1 21 0 468 248 186 3 chr5 75747915 75748237 -123881913 - L1MC5 LINE L1 -171 7790 7410 415 284 0 46 chr5 75749381 75749490 -123880660 + L2 LINE L2 3150 3253 -19 214 209 239 0 chr5 75749645 75749712 -123880438 + MIR SINE MIR 60 142 -120 250 91 0 0 chr5 75749973 75750017 -123880133 + ORSL DNA AcHobo 161 204 -71 454 186 62 8 chr5 75750032 75750161 -123879989 - ORSL DNA AcHobo -117 158 23 1269 186 0 14 chr5 75750478 75750699 -123879451 - AluJb SINE Alu -10 302 85 642 230 17 29 chr5 75751701 75751875 -123878275 - MER5B DNA MER1_type -6 172 1 198 244 174 0 chr5 75754262 75754348 -123875802 + L2 LINE L2 3161 3261 -52 303 257 61 88 chr5 75755241 75755342 -123874808 + MIR3 SINE MIR 54 151 -57 437 270 51 51 chr5 75755342 75755520 -123874630 - MER5B DNA MER1_type 0 178 1 303 257 61 88 chr5 75755520 75755566 -123874584 + MIR3 SINE MIR 151 197 -11 317 326 23 31 chr5 75755816 75755945 -123874205 - MIR SINE MIR -62 146 19 1272 267 74 14 chr5 75756267 75756883 -123873267 - L2 LINE L2 -7 3306 2646 724 294 12 40 chr5 75756887 75757289 -123872861 - L2 LINE L2 -2511 803 413 361 264 11 0 chr5 75757346 75757437 -123872713 + MER58 DNA MER1_type 180 271 -2149 283 200 67 0 chr5 75757441 75757501 -123872649 + MER58 DNA MER1_type 2357 2420 0 349 277 11 11 chr5 75757504 75757598 -123872552 - MIR3 SINE MIR -6 202 109 929 307 129 15 chr5 75757639 75758350 -123871800 - L2 LINE L2 0 3313 2496 321 259 19 56 chr5 75759015 75759123 -123871027 - MER5A DNA MER1_type -27 162 59 455 219 22 48 chr5 75759351 75759539 -123870611 - MER58C DNA MER1_type -4 211 33 251 140 20 0 chr5 75760189 75760239 -123869911 + CT-rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr5 75760355 75760377 -123869773 + AT_rich Low_complexity Low_complexity 1 22 0 247 258 137 65 chr5 75765009 75765133 -123865017 - L2 LINE L2 -19 3294 3162 235 250 18 18 chr5 75765741 75765797 -123864353 - MIR SINE MIR -70 138 83 268 308 65 19 chr5 75766520 75766627 -123863523 - L2 LINE L2 -27 3245 3134 1852 134 51 57 chr5 75766682 75767017 -123863133 + MER1B DNA MER1_type 4 336 -1 261 215 54 21 chr5 75767349 75767442 -123862708 - L1ME LINE L1 -382 5739 5644 1715 143 68 10 chr5 75767873 75768166 -123861984 - AluJb SINE Alu -2 310 1 356 319 70 8 chr5 75768389 75768746 -123861404 - L1 LINE L1 -1718 4428 4050 2501 80 0 0 chr5 75771745 75772056 -123858094 + AluSq SINE Alu 1 311 -2 837 224 83 0 chr5 75775828 75776033 -123854117 - MIR SINE MIR -37 225 4 2201 120 0 0 chr5 75776045 75776344 -123853806 - AluSx SINE Alu -11 301 3 1500 161 16 69 chr5 75776384 75776689 -123853461 - AluJb SINE Alu -23 289 1 2137 116 65 14 chr5 75778014 75778385 -123851765 - MLT1B LTR MaLR 0 390 1 21 36 0 0 chr5 75778545 75778573 -123851577 + AT_rich Low_complexity Low_complexity 1 28 0 804 193 40 6 chr5 75779815 75779991 -123850159 - MER58A DNA MER1_type -1 223 42 227 356 44 31 chr5 75780442 75780602 -123849548 - MER5A DNA MER1_type -3 186 25 217 245 235 20 chr5 75780635 75780733 -123849417 + MIR SINE MIR 28 146 -116 411 317 14 35 chr5 75781534 75781679 -123848471 + L2 LINE L2 3171 3312 -1 883 62 0 0 chr5 75782083 75782195 -123847955 - L1PA8 LINE L1 -9 6163 6052 917 73 0 8 chr5 75782195 75782319 -123847831 - AluY SINE Alu -10 301 179 321 62 0 21 chr5 75782319 75782367 -123847783 - L1PA8 LINE L1 -107 6065 6019 189 207 61 134 chr5 75783881 75783963 -123846187 - L2 LINE L2 -2080 1234 1159 700 292 38 17 chr5 75785912 75786148 -123844002 + MIR SINE MIR 1 241 -21 283 362 30 47 chr5 75786886 75787121 -123843029 + L2 LINE L2 2826 3056 -216 1736 234 100 0 chr5 75787143 75787674 -123842476 - L1ME2 LINE L1 -9 6155 5572 278 296 62 0 chr5 75787728 75787809 -123842341 + L2 LINE L2 3187 3272 0 1596 172 27 54 chr5 75788729 75789026 -123841124 + AluJo SINE Alu 1 289 -23 647 200 0 0 chr5 75789193 75789308 -123840842 - FLAM_A SINE Alu -18 115 1 1825 133 11 7 chr5 75789811 75790096 -123840054 + AluSx SINE Alu 25 310 -2 852 99 0 0 chr5 75790580 75790714 -123839436 - AluY SINE Alu 0 305 172 684 190 86 88 chr5 75790824 75791197 -123838953 - L1MC5 LINE L1 -52 7909 7538 487 289 107 44 chr5 75791663 75792072 -123838078 - L1ME LINE L1 -364 5757 5328 1317 258 93 56 chr5 75792457 75793475 -123836675 - HAL1 LINE L1 -577 1930 875 314 230 9 80 chr5 75793477 75793590 -123836560 + MIR SINE MIR 152 256 -6 306 241 121 19 chr5 75794082 75794189 -123835961 - MIR3 SINE MIR -48 160 43 2677 29 0 6 chr5 75794447 75794760 -123835390 - AluY SINE Alu 0 311 1 900 203 103 56 chr5 75795279 75795687 -123834463 - L1MC5 LINE L1 -54 7907 7481 685 223 46 36 chr5 75795778 75796081 -123834069 - L1MC5 LINE L1 -393 7415 7244 316 281 94 0 chr5 75796353 75796481 -123833669 - MER103 DNA DNA -19 147 8 315 219 177 10 chr5 75798211 75798307 -123831843 - MIR3 SINE MIR -12 196 85 898 117 16 8 chr5 75798385 75798513 -123831637 - FLAM_C SINE Alu -12 131 3 414 0 0 0 chr5 75799808 75799854 -123830296 + (CA)n Simple_repeat Simple_repeat 1 46 0 180 179 0 0 chr5 75800585 75800624 -123829526 + T-rich Low_complexity Low_complexity 1 39 0 214 318 71 0 chr5 75800796 75800881 -123829269 + MIR SINE MIR 57 147 -61 32 0 0 0 chr5 75801538 75801570 -123828580 + AT_rich Low_complexity Low_complexity 1 32 0 2109 159 14 35 chr5 75804533 75804903 -123825247 + MLT1A1 LTR MaLR 1 362 -3 832 254 145 0 chr5 75805440 75805668 -123824482 + MIR SINE MIR 2 262 0 198 281 0 35 chr5 75805859 75805916 -123824234 - L2 LINE L2 0 3313 3259 1028 181 222 33 chr5 75806161 75806521 -123823629 + MSTC LTR MaLR 1 428 0 212 235 107 134 chr5 75807438 75807497 -123822653 + MIR SINE MIR 106 165 -97 1878 79 0 0 chr5 75807497 75807758 -123822392 + AluSq SINE Alu 57 317 0 212 235 107 134 chr5 75807758 75807846 -123822304 + MIR SINE MIR 165 250 -12 225 0 0 0 chr5 75809239 75809264 -123820886 + (T)n Simple_repeat Simple_repeat 1 25 0 185 0 40 0 chr5 75810913 75810938 -123819212 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1546 142 12 0 chr5 75811792 75812032 -123818118 - MLT1A1 LTR MaLR 0 365 123 1442 149 126 6 chr5 75812033 75812362 -123817788 - MER39 LTR ERV1 -294 359 3 327 275 22 22 chr5 75812364 75812455 -123817695 + MER20B DNA MER1_type 73 163 -620 204 202 146 56 chr5 75813412 75813501 -123816649 + MIR SINE MIR 111 207 -55 2621 48 0 0 chr5 75813646 75813955 -123816195 + AluY SINE Alu 1 309 -2 733 207 124 55 chr5 75815169 75815322 -123814828 + MIR SINE MIR 12 186 -76 1761 166 26 57 chr5 75815322 75815707 -123814443 + MLT1A2 LTR MaLR 2 374 0 733 207 124 55 chr5 75815707 75815770 -123814380 + MIR SINE MIR 186 243 -19 23 0 0 0 chr5 75817501 75817524 -123812626 + AT_rich Low_complexity Low_complexity 1 23 0 614 262 156 22 chr5 75817842 75818067 -123812083 - MIR SINE MIR -7 255 1 537 281 22 28 chr5 75818220 75818318 -123811832 - MIR SINE MIR 0 262 163 2411 57 7 0 chr5 75818318 75818625 -123811525 - AluY SINE Alu 0 309 1 537 281 22 28 chr5 75818625 75818703 -123811447 - MIR SINE MIR -99 163 86 312 49 24 0 chr5 75818710 75818751 -123811399 - MER116 DNA Mariner 0 80 39 2882 130 4 39 chr5 75819724 75820185 -123809965 - MER65A LTR ERV1 0 445 1 463 313 119 5 chr5 75821071 75821272 -123808878 + MIR SINE MIR 26 249 -13 203 125 25 0 chr5 75821275 75821315 -123808835 + (ATG)n Simple_repeat Simple_repeat 1 41 0 2027 74 99 7 chr5 75821390 75821673 -123808477 - AluSg1 SINE Alu 0 309 1 264 234 21 32 chr5 75823687 75823781 -123806369 - Charlie8 DNA MER1_type -2269 148 56 378 310 59 16 chr5 75825244 75825431 -123804719 + MIR SINE MIR 36 230 -32 230 333 42 42 chr5 75826029 75826149 -123804001 + L3b LINE CR1 1464 1583 0 444 19 0 0 chr5 75826164 75826217 -123803933 + (GA)n Simple_repeat Simple_repeat 2 54 0 517 270 19 79 chr5 75826624 75826839 -123803311 - MIR SINE MIR 0 262 61 346 241 0 36 chr5 75826967 75827050 -123803100 - MER116 DNA Mariner 0 80 1 338 174 0 70 chr5 75828024 75828110 -123802040 + MLT1L LTR MaLR 15 94 -521 2625 119 111 5 chr5 75829077 75829464 -123800686 + MSTA LTR MaLR 1 428 0 628 297 35 5 chr5 75830118 75830320 -123799830 - MIR SINE MIR -21 241 34 189 0 0 0 chr5 75831424 75831445 -123798705 + (A)n Simple_repeat Simple_repeat 1 21 0 528 210 113 24 chr5 75831855 75831979 -123798171 + FLAM_A SINE Alu 6 140 -2 2176 101 0 0 chr5 75834028 75834304 -123795846 - AluSg SINE Alu -34 276 1 732 170 78 7 chr5 75834385 75834526 -123795624 - MER5A DNA MER1_type 0 189 39 2218 169 11 14 chr5 75834545 75834911 -123795239 - MLT1A1 LTR MaLR 0 365 1 1958 206 50 18 chr5 75834911 75835339 -123794811 + MLT1C LTR MaLR 23 467 0 227 234 0 0 chr5 75835339 75835386 -123794764 - MER5A DNA MER1_type -141 48 2 443 286 109 14 chr5 75835763 75835973 -123794177 + L3b LINE CR1 1199 1428 -155 2279 106 0 3 chr5 75836304 75836606 -123793544 - AluSg SINE Alu -9 301 1 1506 260 164 14 chr5 75836663 75837175 -123792975 - MLT1E LTR MaLR -2 591 3 922 230 61 22 chr5 75837405 75837635 -123792515 + MIR SINE MIR 3 241 -21 295 217 226 0 chr5 75837983 75838089 -123792061 - MIR SINE MIR -70 192 63 267 309 150 55 chr5 75838339 75838559 -123791591 - MIR SINE MIR -20 242 2 386 305 166 7 chr5 75839224 75839382 -123790768 + MIR SINE MIR 12 206 -56 2752 137 41 12 chr5 75839382 75839798 -123790352 + MSTC LTR MaLR 1 428 0 386 305 166 7 chr5 75839798 75839847 -123790303 + MIR SINE MIR 206 246 -16 373 119 17 17 chr5 75840899 75840916 -123789234 + MER3 DNA MER1_type 32 48 -161 693 157 9 0 chr5 75840916 75841031 -123789119 - MER3 DNA MER1_type 0 209 94 271 289 149 9 chr5 75841986 75842100 -123788050 - MIR SINE MIR -117 145 16 22 0 0 0 chr5 75842635 75842657 -123787493 + AT_rich Low_complexity Low_complexity 1 22 0 288 243 21 0 chr5 75843050 75843118 -123787032 - MIR SINE MIR -68 140 65 26 0 0 0 chr5 75843287 75843313 -123786837 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 75843587 75843609 -123786541 + AT_rich Low_complexity Low_complexity 1 22 0 274 317 129 0 chr5 75844141 75844242 -123785908 - L2 LINE L2 0 3313 3200 573 257 138 93 chr5 75844863 75845552 -123784598 + L1ME4a LINE L1 5381 6100 -21 533 221 17 93 chr5 75845678 75845850 -123784300 + MER5B DNA MER1_type 1 159 -19 282 95 0 0 chr5 75847625 75847667 -123782483 + (CA)n Simple_repeat Simple_repeat 1 42 0 854 288 74 56 chr5 75847686 75848075 -123782075 - L1MC4a LINE L1 -1879 5929 5529 1599 172 54 6 chr5 75848075 75848389 -123781761 + L1MB7 LINE L1 5856 6184 0 854 288 74 56 chr5 75848389 75848447 -123781703 - L1MC4a LINE L1 -2279 5529 5474 687 283 30 89 chr5 75849413 75849535 -123780615 - MIR SINE MIR 0 262 134 1537 218 18 60 chr5 75849535 75849921 -123780229 + MLT1A2 LTR MaLR 1 370 -4 4239 105 52 3 chr5 75849921 75850503 -123779647 + MER4B LTR ERV1 1 610 0 687 283 30 89 chr5 75850503 75850648 -123779502 - MIR SINE MIR -126 136 10 286 314 127 0 chr5 75850787 75850905 -123779245 + L2 LINE L2 3136 3268 -4 1322 271 103 2 chr5 75851158 75851564 -123778586 - LTR16A LTR ERVL -3 447 1 493 296 18 62 chr5 75852207 75852433 -123777717 + MIR SINE MIR 20 235 -27 533 267 70 5 chr5 75853303 75853500 -123776650 + MIR SINE MIR 1 210 -52 740 215 56 28 chr5 75853701 75853915 -123776235 + MIR SINE MIR 36 255 -7 3892 205 74 75 chr5 75854528 75854634 -123775516 - Charlie2a DNA MER1_type -3 2859 2754 386 239 138 38 chr5 75854634 75854793 -123775357 - MER104 DNA MER2_type -1 179 5 3892 205 74 75 chr5 75854793 75855176 -123774974 - Charlie2a DNA MER1_type -108 2754 2372 651 217 86 30 chr5 75855176 75855374 -123774776 - MER3 DNA MER1_type 0 209 1 3892 205 74 75 chr5 75855374 75855662 -123774488 - Charlie2a DNA MER1_type -490 2372 2085 2276 109 0 3 chr5 75855662 75855965 -123774185 - AluSx SINE Alu -7 305 4 3892 205 74 75 chr5 75855965 75856262 -123773888 - Charlie2a DNA MER1_type -777 2085 1789 1530 166 10 52 chr5 75856262 75856552 -123773598 - AluJo SINE Alu -25 287 10 3892 205 74 75 chr5 75856552 75857016 -123773134 - Charlie2a DNA MER1_type -1073 1789 1319 22 0 0 0 chr5 75857021 75857043 -123773107 + AT_rich Low_complexity Low_complexity 1 22 0 2202 81 4 0 chr5 75857043 75857316 -123772834 - AluSg SINE Alu -36 274 1 264 234 21 32 chr5 75859330 75859424 -123770726 - Charlie8 DNA MER1_type -2269 148 56 342 312 65 16 chr5 75860893 75861079 -123769071 + MIR SINE MIR 36 230 -32 230 333 42 42 chr5 75861677 75861797 -123768353 + L3b LINE CR1 1464 1583 0 516 16 0 0 chr5 75861812 75861873 -123768277 + (GA)n Simple_repeat Simple_repeat 2 62 0 511 269 19 83 chr5 75862280 75862496 -123767654 - MIR SINE MIR 0 262 61 346 241 0 36 chr5 75862624 75862707 -123767443 - MER116 DNA Mariner 0 80 1 338 174 0 70 chr5 75863681 75863767 -123766383 + MLT1L LTR MaLR 15 94 -521 2624 111 114 8 chr5 75864734 75865121 -123765029 + MSTA LTR MaLR 1 428 0 628 297 35 5 chr5 75865775 75865977 -123764173 - MIR SINE MIR -21 241 34 541 202 113 24 chr5 75867510 75867634 -123762516 + FLAM_A SINE Alu 6 140 -2 2198 98 0 0 chr5 75869684 75869960 -123760190 - AluSg SINE Alu -34 276 1 743 163 78 7 chr5 75870041 75870182 -123759968 - MER5A DNA MER1_type 0 189 39 2218 169 11 14 chr5 75870201 75870567 -123759583 - MLT1A1 LTR MaLR 0 365 1 1968 206 50 18 chr5 75870567 75870995 -123759155 + MLT1C LTR MaLR 23 467 0 227 234 0 0 chr5 75870995 75871042 -123759108 - MER5A DNA MER1_type -141 48 2 443 286 109 14 chr5 75871419 75871629 -123758521 + L3b LINE CR1 1199 1428 -155 2293 106 0 3 chr5 75871961 75872263 -123757887 - AluSg SINE Alu -9 301 1 1467 262 164 14 chr5 75872320 75872832 -123757318 - MLT1E LTR MaLR -2 591 3 912 230 61 22 chr5 75873062 75873292 -123756858 + MIR SINE MIR 3 241 -21 295 217 226 0 chr5 75873640 75873746 -123756404 - MIR SINE MIR -70 192 63 230 192 77 19 chr5 75873966 75874018 -123756132 + L1PBb LINE L1 249 303 -5901 189 310 178 52 chr5 75874042 75874216 -123755934 - MIR SINE MIR -65 197 2 399 298 170 7 chr5 75874874 75875039 -123755111 + MIR SINE MIR 3 206 -56 2726 139 41 12 chr5 75875039 75875455 -123754695 + MSTC LTR MaLR 1 428 0 399 298 170 7 chr5 75875455 75875504 -123754646 + MIR SINE MIR 206 246 -16 324 306 27 66 chr5 75875974 75876157 -123753993 + MIR SINE MIR 87 262 0 276 89 0 0 chr5 75877363 75877408 -123752742 - AluSc SINE Alu 0 299 255 1987 106 46 46 chr5 75877501 75877803 -123752347 - AluSg SINE Alu -8 302 1 22 0 0 0 chr5 75877803 75877825 -123752325 + AT_rich Low_complexity Low_complexity 1 22 0 416 261 60 60 chr5 75878342 75878541 -123751609 - MLT1J LTR MaLR -203 308 110 366 307 25 49 chr5 75879685 75879848 -123750302 - MIR SINE MIR -96 166 8 442 241 0 11 chr5 75880300 75880387 -123749763 - MER5B DNA MER1_type -92 86 1 589 259 0 0 chr5 75880458 75880570 -123749580 - MER81 DNA DNA 0 114 3 216 328 62 16 chr5 75881417 75881545 -123748605 - MIR SINE MIR -12 250 117 234 316 74 32 chr5 75881729 75881824 -123748326 + MIR SINE MIR 3 101 -161 249 344 94 38 chr5 75882249 75882537 -123747613 - L3 LINE CR1 -3 1574 1271 228 143 0 0 chr5 75885140 75885182 -123744968 + (CA)n Simple_repeat Simple_repeat 1 42 0 828 291 80 34 chr5 75885201 75885589 -123744561 - L1MC4a LINE L1 -1879 5929 5524 1150 198 43 40 chr5 75885590 75885918 -123744232 + L1MB7 LINE L1 5856 6184 0 181 344 46 69 chr5 75887158 75887275 -123742875 - L2 LINE L2 -3 3269 3154 1963 175 54 28 chr5 75887275 75887629 -123742521 - MLT1A1 LTR MaLR -2 363 1 181 344 46 69 chr5 75887629 75887642 -123742508 - L2 LINE L2 -118 3154 3142 471 261 137 30 chr5 75887647 75887881 -123742269 + MIR SINE MIR 1 259 -3 327 270 233 23 chr5 75888311 75888564 -123741586 + L1ME LINE L1 5492 5791 -330 219 114 0 0 chr5 75888616 75888651 -123741499 + (CA)n Simple_repeat Simple_repeat 1 35 0 1753 111 4 4 chr5 75888651 75888894 -123741256 - AluSq SINE Alu -14 299 57 393 189 0 94 chr5 75889389 75889495 -123740655 - MLT1H LTR MaLR -20 529 434 374 220 73 0 chr5 75889696 75889805 -123740345 - MLT1J LTR MaLR -432 117 1 4075 78 47 2 chr5 75889891 75890420 -123739730 - MER41A LTR ERV1 0 554 2 309 26 0 0 chr5 75891266 75891304 -123738846 + (TG)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr5 75892523 75892544 -123737606 + AT_rich Low_complexity Low_complexity 1 21 0 3416 142 218 33 chr5 75892729 75893426 -123736724 - LTR1B LTR ERV1 0 826 1 470 250 9 0 chr5 75893758 75893870 -123736280 + MER103 DNA DNA 4 116 -50 320 311 139 8 chr5 75894027 75894149 -123736001 + MIR SINE MIR 16 153 -55 9350 54 5 8 chr5 75894206 75895281 -123734869 - MER11C LTR ERVK 0 1071 1 193 204 68 0 chr5 75895789 75895833 -123734317 - L2 LINE L2 0 3313 3267 22 35 0 0 chr5 75895994 75896023 -123734127 + AT_rich Low_complexity Low_complexity 1 29 0 860 120 0 8 chr5 75896363 75896488 -123733662 - FLAM_C SINE Alu -19 124 1 380 246 126 60 chr5 75897826 75897860 -123732290 + MIR SINE MIR 68 98 -164 2592 159 164 34 chr5 75897860 75898395 -123731755 - MER6A DNA MER2_type 0 605 1 380 246 126 60 chr5 75898395 75898543 -123731607 + MIR SINE MIR 98 262 0 739 304 16 24 chr5 75899333 75899583 -123730567 - MIR SINE MIR -10 252 5 244 387 8 24 chr5 75900517 75900641 -123729509 - MIR3 SINE MIR -13 195 74 462 201 121 40 chr5 75900691 75900865 -123729285 - L1ME4a LINE L1 -3 6118 5931 496 231 82 7 chr5 75900957 75901104 -123729046 - L1ME4a LINE L1 -3 6118 5961 5504 233 54 30 chr5 75901686 75902118 -123728032 - L1MEc LINE L1 -1150 5065 4645 271 149 0 0 chr5 75902118 75902165 -123727985 + MADE1 DNA Mariner 1 47 -33 5504 233 54 30 chr5 75902165 75902714 -123727436 - L1MEc LINE L1 -1570 4645 4111 210 37 0 0 chr5 75902714 75902741 -123727409 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5504 233 54 30 chr5 75902741 75902836 -123727314 - L1MEc LINE L1 -2104 4111 4020 2630 177 49 40 chr5 75902836 75903385 -123726765 - MLT2B3 LTR ERVL 0 554 1 5504 233 54 30 chr5 75903385 75904179 -123725971 - L1MEc LINE L1 -2195 4020 3101 639 155 0 10 chr5 75904179 75904282 -123725868 - FLAM_A SINE Alu -33 109 8 5140 243 73 45 chr5 75904289 75906835 -123723315 - L1MEc LINE L1 -3105 3110 496 3039 112 9 5 chr5 75906835 75907281 -123722869 - L1PA16 LINE L1 -11 6155 5708 5140 243 73 45 chr5 75907281 75907754 -123722396 - L1MEc LINE L1 -5719 496 38 361 289 64 17 chr5 75907861 75908034 -123722116 - L1ME4a LINE L1 -2297 5488 5308 1852 153 64 19 chr5 75908920 75909293 -123720857 - MLT1B LTR MaLR 0 390 1 1925 154 3 31 chr5 75909654 75909972 -123720178 + AluJb SINE Alu 1 309 -3 616 259 19 0 chr5 75910066 75910224 -123719926 - MER63A DNA MER1_type 0 210 50 25 83 0 0 chr5 75910724 75910784 -123719366 + AT_rich Low_complexity Low_complexity 1 60 0 360 43 0 0 chr5 75910904 75910950 -123719200 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 384 341 78 17 chr5 75910968 75911147 -123719003 - L2 LINE L2 0 3272 3083 194 375 153 19 chr5 75911240 75911456 -123718694 + L2 LINE L2 3028 3272 0 1669 156 129 9 chr5 75911501 75911684 -123718466 - MLT1A2 LTR MaLR 0 374 214 351 0 0 0 chr5 75911684 75911723 -123718427 + (GA)n Simple_repeat Simple_repeat 2 40 0 1669 156 129 9 chr5 75911723 75911873 -123718277 - MLT1A2 LTR MaLR -160 214 1 367 317 31 79 chr5 75912097 75912324 -123717826 - L2 LINE L2 -540 2774 2559 287 267 13 0 chr5 75912469 75912544 -123717606 - MIR SINE MIR -12 250 175 455 294 74 12 chr5 75914277 75914440 -123715710 + MIR3 SINE MIR 13 185 -23 299 300 36 27 chr5 75914453 75914563 -123715587 - MER5B DNA MER1_type -5 173 63 232 236 42 0 chr5 75914565 75914637 -123715513 - MER69 DNA AcHobo 0 2526 2452 * 523 216 29 36 chr5 75914635 75914774 -123715376 - MER69 DNA AcHobo -2381 145 8 266 154 64 77 chr5 75914775 75914853 -123715297 + MER5B DNA MER1_type 102 178 0 362 347 109 51 chr5 75914911 75915205 -123714945 + L2 LINE L2 2925 3235 -37 2042 162 0 0 chr5 75915544 75915853 -123714297 - AluSx SINE Alu -3 309 1 393 284 0 45 chr5 75915895 75916050 -123714100 - LTR33 LTR ERVL -354 167 20 2054 134 10 7 chr5 75916608 75916913 -123713237 - AluSx SINE Alu -6 306 1 309 336 67 0 chr5 75917855 75917974 -123712176 + L2 LINE L2 3146 3272 0 346 264 236 0 chr5 75918939 75919083 -123711067 + MIR SINE MIR 72 249 -13 255 241 37 0 chr5 75919393 75919447 -123710703 - L2 LINE L2 -96 3176 3121 490 252 98 7 chr5 75919479 75919622 -123710528 - MER5A DNA MER1_type -3 186 31 586 311 130 45 chr5 75920077 75921107 -123709043 - L2 LINE L2 -632 2682 1565 11379 85 12 4 chr5 75922269 75924645 -123705505 - L1PA7 LINE L1 -4 6150 3758 464 216 156 36 chr5 75925080 75925247 -123704903 + MIR SINE MIR 25 211 -51 2347 116 0 0 chr5 75925325 75925702 -123704448 + AluSx SINE Alu 1 377 0 719 191 115 93 chr5 75925705 75926061 -123704089 + LTR16A1 LTR ERVL 93 456 -1 322 280 152 32 chr5 75927530 75927655 -123702495 - MIR SINE MIR -108 154 15 1130 267 94 6 chr5 75927790 75928258 -123701892 - L1MC4a LINE L1 -1716 6092 5584 384 323 42 32 chr5 75928612 75928801 -123701349 + MIR SINE MIR 20 210 -52 343 119 17 17 chr5 75930132 75930149 -123700001 + MER3 DNA MER1_type 32 48 -161 633 157 9 0 chr5 75930149 75930264 -123699886 - MER3 DNA MER1_type 0 209 94 267 311 247 14 chr5 75931142 75931367 -123698783 - MIR SINE MIR -3 259 5 22 0 0 0 chr5 75931868 75931890 -123698260 + AT_rich Low_complexity Low_complexity 1 22 0 289 243 21 0 chr5 75932283 75932351 -123697799 - MIR SINE MIR -68 140 65 26 0 0 0 chr5 75932520 75932546 -123697604 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 75932820 75932842 -123697308 + AT_rich Low_complexity Low_complexity 1 22 0 186 267 23 81 chr5 75933128 75933214 -123696936 - L2 LINE L2 0 3272 3192 278 380 105 5 chr5 75933374 75933574 -123696576 - L2 LINE L2 0 3313 3094 333 274 45 32 chr5 75933713 75933870 -123696280 + L1ME4a LINE L1 5004 5162 -984 383 261 124 43 chr5 75934064 75934321 -123695829 + L1ME4a LINE L1 5381 5658 -463 273 291 42 37 chr5 75934447 75934636 -123695514 + L1ME4a LINE L1 5736 5925 -196 532 220 17 98 chr5 75934887 75935060 -123695090 + MER5B DNA MER1_type 1 159 -19 270 143 0 0 chr5 75936836 75936885 -123693265 + (CA)n Simple_repeat Simple_repeat 1 49 0 691 290 74 56 chr5 75936905 75937294 -123692856 - L1MC4a LINE L1 -1879 5929 5529 1442 172 54 6 chr5 75937294 75937608 -123692542 + L1MB7 LINE L1 5856 6184 0 691 290 74 56 chr5 75937608 75937666 -123692484 - L1MC4a LINE L1 -2279 5529 5474 692 283 30 89 chr5 75938632 75938754 -123691396 - MIR SINE MIR 0 262 134 1379 220 16 57 chr5 75938754 75939140 -123691010 + MLT1A2 LTR MaLR 1 370 -4 3936 105 52 3 chr5 75939140 75939722 -123690428 + MER4B LTR ERV1 1 610 0 692 283 30 89 chr5 75939722 75939867 -123690283 - MIR SINE MIR -126 136 10 288 314 127 0 chr5 75940006 75940124 -123690026 + L2 LINE L2 3136 3268 -4 1181 264 103 2 chr5 75940377 75940783 -123689367 - LTR16A LTR ERVL -3 447 1 499 296 18 62 chr5 75941424 75941650 -123688500 + MIR SINE MIR 20 235 -27 539 267 70 5 chr5 75942520 75942717 -123687433 + MIR SINE MIR 1 210 -52 754 215 56 28 chr5 75942918 75943132 -123687018 + MIR SINE MIR 36 255 -7 5466 219 112 62 chr5 75943746 75943852 -123686298 - Charlie2a DNA MER1_type -3 2859 2760 317 239 138 38 chr5 75943852 75944011 -123686139 - MER104 DNA MER2_type -1 179 5 5466 219 112 62 chr5 75944011 75944394 -123685756 - Charlie2a DNA MER1_type -102 2760 2397 564 217 91 35 chr5 75944394 75944592 -123685558 - MER3 DNA MER1_type 0 209 1 5466 219 112 62 chr5 75944592 75944880 -123685270 - Charlie2a DNA MER1_type -465 2397 2125 2281 109 0 3 chr5 75944880 75945183 -123684967 - AluSx SINE Alu -7 305 4 5466 219 112 62 chr5 75945183 75945480 -123684670 - Charlie2a DNA MER1_type -737 2125 1844 1557 166 10 52 chr5 75945480 75945770 -123684380 - AluJo SINE Alu -25 287 10 5466 219 112 62 chr5 75945770 75946261 -123683889 - Charlie2a DNA MER1_type -1018 1844 1379 2174 94 0 4 chr5 75946261 75946536 -123683614 - AluSg SINE Alu -36 274 1 5466 219 112 62 chr5 75946536 75947645 -123682505 - Charlie2a DNA MER1_type -1483 1379 48 1803 188 126 32 chr5 75947990 75948452 -123681698 - MLT1D LTR MaLR 0 505 1 188 224 102 0 chr5 75948640 75948689 -123681461 - L2 LINE L2 -1 3312 3259 289 270 87 43 chr5 75949494 75949609 -123680541 - MIR SINE MIR -57 151 32 217 297 136 8 chr5 75950256 75950374 -123679776 + MIR SINE MIR 118 250 -12 1610 177 22 10 chr5 75950934 75951250 -123678900 - MER33 DNA MER1_type -12 312 1 707 189 105 21 chr5 75951977 75952168 -123677982 - L1MD3 LINE L1 -2 7993 7787 336 299 70 70 chr5 75952826 75952983 -123677167 + L2 LINE L2 3100 3256 -16 1846 152 7 10 chr5 75953781 75954077 -123676073 + AluSx SINE Alu 1 295 -17 450 284 53 45 chr5 75957549 75957991 -123672159 + L1ME3A LINE L1 5152 5596 -574 322 261 142 41 chr5 75958035 75958253 -123671897 + L1ME3A LINE L1 5683 5922 -248 409 203 0 14 chr5 75958300 75958374 -123671776 + MER82 DNA MER2_type 1 73 -580 1117 140 211 101 chr5 75958414 75958722 -123671428 - MER2 DNA MER2_type -1 343 2 265 269 77 15 chr5 75958741 75958871 -123671279 - MIR SINE MIR -57 205 68 965 195 28 60 chr5 75958948 75959163 -123670987 + MER82 DNA MER2_type 446 653 0 23 0 0 0 chr5 75959533 75959556 -123670594 + AT_rich Low_complexity Low_complexity 1 23 0 2256 102 7 0 chr5 75959740 75960033 -123670117 - AluSx SINE Alu -17 295 1 186 43 0 0 chr5 75960131 75960154 -123669996 + (CA)n Simple_repeat Simple_repeat 2 24 0 591 219 0 0 chr5 75961628 75961885 -123668265 + (TG)n Simple_repeat Simple_repeat 1 257 0 476 188 7 0 chr5 75961910 75962048 -123668102 + (TG)n Simple_repeat Simple_repeat 2 140 0 406 286 141 45 chr5 75962365 75962848 -123667302 + L1ME2 LINE L1 2972 3500 -2646 523 192 103 19 chr5 75963064 75963220 -123666930 - L1MC4a LINE L1 0 7808 7640 * 2275 189 80 9 chr5 75963219 75963766 -123666384 - L1MD3 LINE L1 -478 7517 6762 450 285 84 19 chr5 75963761 75963975 -123666175 + L1ME2 LINE L1 3626 3853 -2293 * 1876 175 23 52 chr5 75963959 75964347 -123665803 + L1MB1 LINE L1 5594 5970 -219 * 2023 212 53 23 chr5 75964345 75964525 -123665625 + L1ME2 LINE L1 5362 5535 -629 3758 206 58 15 chr5 75964525 75965381 -123664769 + MER97a DNA MER1_type 1 893 -1 2023 212 53 23 chr5 75965381 75965723 -123664427 + L1ME2 LINE L1 5535 5900 -264 351 308 104 22 chr5 75966109 75966291 -123663859 + L1M4 LINE L1 4741 4937 -1209 25 65 0 0 chr5 75966667 75966713 -123663437 + AT_rich Low_complexity Low_complexity 1 46 0 2429 268 134 35 chr5 75967024 75967522 -123662628 - HAL1 LINE L1 -3 2504 2057 1393 193 0 82 chr5 75967522 75967853 -123662297 + AluJo SINE Alu 1 304 -8 2429 268 134 35 chr5 75967853 75968731 -123661419 - HAL1 LINE L1 -450 2057 992 533 208 31 11 chr5 75968742 75968883 -123661267 - MLT1J2 LTR MaLR -226 183 43 994 298 116 55 chr5 75968905 75969727 -123660423 - HAL1 LINE L1 -1633 874 3 232 196 215 51 chr5 75969742 75969900 -123660250 + L1ME4a LINE L1 5866 6049 -72 2165 111 0 3 chr5 75969930 75970227 -123659923 - AluY SINE Alu -15 296 1 1467 201 18 3 chr5 75970289 75970572 -123659578 - AluJo SINE Alu -25 287 1 21 36 0 0 chr5 75970596 75970624 -123659526 + AT_rich Low_complexity Low_complexity 1 28 0 569 256 139 19 chr5 75970767 75970982 -123659168 - MIR SINE MIR -17 245 5 239 216 81 126 chr5 75971439 75971550 -123658600 - L1P2 LINE L1 -563 5591 5486 1683 164 7 7 chr5 75971664 75971945 -123658205 - AluJo SINE Alu -31 281 1 813 142 50 7 chr5 75972171 75972312 -123657838 - L1MB8 LINE L1 -5 6173 6027 1711 158 50 74 chr5 75972313 75972717 -123657433 + L1MC3 LINE L1 6701 7094 -691 * 6482 207 109 16 chr5 75972698 75974197 -123655953 - L1M4b LINE L1 -5221 1638 1 2870 189 176 40 chr5 75974428 75975154 -123654996 + LTR1B LTR ERV1 2 826 0 2044 140 50 58 chr5 75977457 75977835 -123652315 + THE1C LTR MaLR 1 375 0 1333 108 128 0 chr5 75978015 75978219 -123651931 - MER30 DNA MER1_type 0 230 1 225 306 171 0 chr5 75979267 75979378 -123650772 + L2 LINE L2 3178 3307 -6 356 290 20 10 chr5 75982155 75982255 -123647895 - MIR3 SINE MIR -41 167 67 665 187 243 32 chr5 75982281 75982532 -123647618 + L1MC4 LINE L1 6976 7279 -763 191 352 114 11 chr5 75984441 75984529 -123645621 + L2 LINE L2 3129 3225 -47 * 479 275 170 18 chr5 75984522 75984740 -123645410 + MIR SINE MIR 5 255 -7 1972 100 50 4 chr5 75984797 75985077 -123645073 + AluSx SINE Alu 1 293 -19 24 32 0 0 chr5 75987161 75987192 -123642958 + AT_rich Low_complexity Low_complexity 1 31 0 1379 180 0 63 chr5 75988151 75988265 -123641885 + AluJb SINE Alu 21 141 -171 2381 85 0 0 chr5 75988265 75988560 -123641590 - AluY SINE Alu -16 295 1 1379 180 0 63 chr5 75988560 75988729 -123641421 + AluJb SINE Alu 141 286 -26 221 250 154 59 chr5 75988808 75988944 -123641206 + MIR SINE MIR 64 212 -50 391 133 173 0 chr5 75989037 75989112 -123641038 - MLT1A1 LTR MaLR 0 365 278 1069 283 163 31 chr5 75989277 75989761 -123640389 - L1MEd LINE L1 -5566 553 6 804 200 0 22 chr5 75991630 75991765 -123638385 - FLAM_A SINE Alu -1 132 1 4804 123 27 16 chr5 75991773 75992540 -123637610 - L1MA6 LINE L1 0 6300 5525 2091 149 0 0 chr5 75992549 75992844 -123637306 - AluSx SINE Alu -17 295 1 461 234 24 32 chr5 75993241 75993365 -123636785 + LTR67 LTR ERVL 429 551 -6 399 246 204 48 chr5 75994592 75994759 -123635391 + MIR SINE MIR 49 241 -21 192 234 112 47 chr5 75995076 75995183 -123634967 - MIR SINE MIR -64 144 31 200 260 240 10 chr5 75996558 75996654 -123633496 - L2 LINE L2 0 3313 3196 300 273 144 0 chr5 75996760 75996892 -123633258 + L2 LINE L2 3163 3313 0 420 184 92 0 chr5 75996918 75997016 -123633134 - MIR SINE MIR -108 154 48 188 301 43 32 chr5 75998185 75998278 -123631872 + MIR3 SINE MIR 107 200 -8 777 260 144 30 chr5 75999965 76000326 -123629824 - MLT1J2 LTR MaLR -26 424 23 508 220 124 60 chr5 76000623 76000937 -123629213 - L1ME4a LINE L1 -2 6119 5786 1850 218 67 4 chr5 76001052 76001515 -123628635 + LTR54B LTR ERV1 1 492 -6 296 309 176 7 chr5 76001575 76001711 -123628439 - MER5A DNA MER1_type -2 187 29 1076 151 9 93 chr5 76001909 76002134 -123628016 + MER20 DNA MER1_type 10 215 -4 769 174 27 0 chr5 76002168 76002317 -123627833 - MER105 DNA DNA -23 181 29 1447 164 4 82 chr5 76002347 76002628 -123627522 + AluJb SINE Alu 1 259 -53 256 151 0 55 chr5 76002666 76002739 -123627411 + CT-rich Low_complexity Low_complexity 1 69 0 2063 135 60 31 chr5 76003527 76004060 -123626090 + MER51A LTR ERV1 5 634 0 224 175 0 25 chr5 76004339 76004379 -123625771 - MER5B DNA MER1_type -136 42 4 1861 182 165 49 chr5 76004477 76004899 -123625251 + MLT2B1 LTR ERVL 1 483 -37 387 0 0 0 chr5 76004899 76004942 -123625208 + (TG)n Simple_repeat Simple_repeat 2 44 0 1861 182 165 49 chr5 76004942 76004985 -123625165 + MLT2B1 LTR ERVL 483 520 0 243 61 0 0 chr5 76005336 76005369 -123624781 + (TG)n Simple_repeat Simple_repeat 2 34 0 5574 85 44 5 chr5 76006589 76007367 -123622783 - L1PA10 LINE L1 -16 6152 5345 1059 249 9 4 chr5 76008835 76009064 -123621086 + MIR SINE MIR 12 241 -21 192 409 23 0 chr5 76009340 76009428 -123620722 - MIR SINE MIR -152 110 21 317 250 0 13 chr5 76009666 76009742 -123620408 - LTR33A LTR ERVL -3 520 446 304 280 68 17 chr5 76009938 76010056 -123620094 - LTR33A LTR ERVL -344 179 56 1002 269 104 28 chr5 76010909 76011418 -123618732 + L1ME3 LINE L1 4822 5369 -777 308 221 21 53 chr5 76011437 76011532 -123618618 - L1MC4 LINE L1 -1337 6705 6614 222 148 0 0 chr5 76011532 76011586 -123618564 + (TA)n Simple_repeat Simple_repeat 2 55 0 2770 229 64 19 chr5 76011586 76012355 -123617795 + L1ME3 LINE L1 5360 6162 0 212 218 73 36 chr5 76012611 76012666 -123617484 + L2 LINE L2 3247 3303 -10 761 274 95 35 chr5 76014472 76014789 -123615361 + MER102b DNA MER1_type 3 338 -3 1679 227 43 45 chr5 76018804 76019267 -123610883 - LTR40b LTR ERVL 0 462 1 483 18 0 0 chr5 76019272 76019328 -123610822 + (TA)n Simple_repeat Simple_repeat 1 56 0 1941 242 140 17 chr5 76019899 76020535 -123609615 - L1ME3A LINE L1 -8 6162 5449 1576 241 124 70 chr5 76020946 76021646 -123608504 + MER21B LTR ERV1 1 738 -125 828 265 10 16 chr5 76023125 76023364 -123606786 + MIR SINE MIR 16 251 -11 305 272 118 59 chr5 76024995 76025131 -123605019 - MIR SINE MIR -90 172 29 958 266 69 50 chr5 76025573 76026036 -123604114 - L1ME3A LINE L1 -27 6143 5672 464 240 176 19 chr5 76026892 76027205 -123602945 - L1ME4a LINE L1 -4 6117 5756 585 283 83 16 chr5 76029744 76030058 -123600092 - L1ME4a LINE L1 -230 5891 5557 207 0 0 0 chr5 76031796 76031819 -123598331 + (T)n Simple_repeat Simple_repeat 1 23 0 1012 206 98 29 chr5 76031882 76032197 -123597953 - MER63C DNA MER1_type -592 338 2 1452 196 167 51 chr5 76032202 76032711 -123597439 + MER63C DNA MER1_type 363 930 0 708 253 85 70 chr5 76033390 76033777 -123596373 - MLT1K LTR MaLR 0 588 196 1139 261 188 2 chr5 76033816 76034226 -123595924 + LTR16C LTR ERVL 1 486 -5 1602 75 205 0 chr5 76034907 76035146 -123595004 - AluY SINE Alu -19 292 5 22 56 0 0 chr5 76035152 76035188 -123594962 + AT_rich Low_complexity Low_complexity 1 36 0 403 298 16 16 chr5 76035952 76036076 -123594074 - L2 LINE L2 -2 3311 3188 501 169 93 25 chr5 76039585 76039703 -123590447 - MER45 DNA AcHobo 0 1581 1456 1074 285 96 15 chr5 76039749 76040383 -123589767 - MER45C DNA AcHobo -213 740 1 423 0 0 0 chr5 76040705 76040752 -123589398 + (CA)n Simple_repeat Simple_repeat 1 47 0 1766 116 49 18 chr5 76041553 76041837 -123588313 + AluSc SINE Alu 1 293 -16 262 189 32 95 chr5 76041896 76041991 -123588159 - MIR SINE MIR 0 262 174 3015 151 87 11 chr5 76042152 76042714 -123587436 - MER6A DNA MER2_type 0 605 1 2082 76 0 0 chr5 76042723 76042974 -123587176 - AluY SINE Alu -60 251 1 1445 274 160 24 chr5 76042982 76043312 -123586838 - L2 LINE L2 -805 2509 2225 756 211 74 0 chr5 76043312 76043487 -123586663 + MER5A DNA MER1_type 2 189 0 1445 274 160 24 chr5 76043487 76043868 -123586282 - L2 LINE L2 -1089 2225 1701 267 234 65 0 chr5 76043868 76043945 -123586205 + CT-rich Low_complexity Low_complexity 1 82 0 256 310 45 66 chr5 76043976 76044433 -123585717 - L2 LINE L2 -1617 1697 1181 2109 116 10 3 chr5 76045202 76045504 -123584646 + AluSg SINE Alu 1 304 -6 463 300 72 33 chr5 76047538 76047718 -123582432 - MER5A DNA MER1_type 0 189 3 447 191 32 0 chr5 76048853 76048947 -123581203 - MLT1G1 LTR MaLR -2 593 497 297 231 190 61 chr5 76049034 76049272 -123580878 - MLT1F LTR MaLR -305 285 20 645 262 61 96 chr5 76049765 76050228 -123579922 + MLT1J LTR MaLR 1 480 -31 328 250 45 0 chr5 76050510 76050598 -123579552 + L2 LINE L2 3221 3312 -1 254 39 77 0 chr5 76052070 76052122 -123578028 + (TG)n Simple_repeat Simple_repeat 2 57 0 832 176 119 45 chr5 76054064 76054240 -123575910 - MER5A DNA MER1_type 0 189 1 880 260 159 56 chr5 76054652 76055060 -123575090 - MLT1J2 LTR MaLR 0 450 1 328 194 65 0 chr5 76056229 76056291 -123573859 - MER2 DNA MER2_type 0 345 280 2223 129 0 0 chr5 76056302 76056605 -123573545 + AluSx SINE Alu 1 303 -9 1150 179 0 5 chr5 76056617 76056812 -123573338 - MER2 DNA MER2_type -151 194 1 459 216 40 16 chr5 76056960 76057085 -123573065 + MER5B DNA MER1_type 10 137 -41 5067 173 36 26 chr5 76059318 76059945 -123570205 + L1MA9 LINE L1 5156 5775 -537 459 0 0 0 chr5 76059945 76059996 -123570154 + (TG)n Simple_repeat Simple_repeat 1 51 0 255 31 0 0 chr5 76059995 76060027 -123570123 + (GA)n Simple_repeat Simple_repeat 1 32 0 * 5067 173 36 26 chr5 76059996 76060503 -123569647 + L1MA9 LINE L1 5775 6273 -39 788 179 156 18 chr5 76061174 76061398 -123568752 - Charlie5 DNA MER1_type 0 2623 2369 428 293 73 24 chr5 76061549 76061713 -123568437 + MER5A DNA MER1_type 2 173 -16 612 278 86 20 chr5 76061768 76062013 -123568137 + MER102a DNA MER1_type 31 291 -39 1362 171 35 0 chr5 76062042 76062300 -123567850 - L1MD3 LINE L1 -1 7994 7728 189 0 0 0 chr5 76063567 76063588 -123566562 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 924 188 0 0 chr5 76063594 76063743 -123566407 - FRAM SINE Alu -30 146 1 212 128 21 21 chr5 76064344 76064391 -123565759 + T-rich Low_complexity Low_complexity 3 49 0 489 248 16 8 chr5 76065521 76065642 -123564508 - MER5A DNA MER1_type 0 189 68 415 276 10 0 chr5 76065684 76065782 -123564368 + MER5A DNA MER1_type 11 109 -80 238 365 35 0 chr5 76066468 76066583 -123563567 - L2 LINE L2 -488 2826 2708 * 252 296 184 54 chr5 76066580 76066596 -123563554 - L2 LINE L2 -765 2549 2536 198 0 0 0 chr5 76066596 76066618 -123563532 + (TTG)n Simple_repeat Simple_repeat 2 23 0 252 296 184 54 chr5 76066618 76066878 -123563272 - L2 LINE L2 -778 2536 2237 2050 136 0 16 chr5 76067105 76067413 -123562737 - AluSx SINE Alu -9 303 1 262 354 0 27 chr5 76067510 76067657 -123562493 + L2 LINE L2 3166 3308 -5 274 301 26 18 chr5 76068770 76068883 -123561267 + L2 LINE L2 3114 3227 -86 293 308 58 8 chr5 76069322 76069442 -123560708 - MIR SINE MIR -32 230 105 207 256 56 11 chr5 76069424 76069514 -123560636 - L2 LINE L2 -665 2649 2556 * 203 282 26 13 chr5 76069498 76069576 -123560574 - MIR SINE MIR -72 136 58 * 50 0 0 0 chr5 76069754 76069804 -123560346 + AT_rich Low_complexity Low_complexity 1 50 0 956 274 113 25 chr5 76070427 76070525 -123559625 - L2 LINE L2 0 3313 3225 1635 167 65 3 chr5 76070525 76070819 -123559331 + AluJo SINE Alu 1 312 0 956 274 113 25 chr5 76070819 76071329 -123558821 - L2 LINE L2 -88 3225 2635 401 250 125 34 chr5 76075164 76075340 -123554810 - MIR3 SINE MIR -3 205 14 1248 159 10 19 chr5 76075659 76075866 -123554284 - 7SLRNA srpRNA srpRNA -105 215 11 742 207 8 0 chr5 76075890 76076011 -123554139 - FLAM_A SINE Alu -10 123 2 427 297 18 0 chr5 76076432 76076543 -123553607 + MIR SINE MIR 50 162 -100 21 57 0 0 chr5 76076772 76076807 -123553343 + AT_rich Low_complexity Low_complexity 1 35 0 211 340 48 48 chr5 76077072 76077219 -123552931 - L2 LINE L2 -8 3264 3118 2129 171 12 6 chr5 76077241 76077695 -123552455 - MLT2B2 LTR ERVL -8 507 5 1426 271 69 6 chr5 76077900 76078380 -123551770 + L2 LINE L2 2804 3313 0 292 236 55 146 chr5 76080178 76080343 -123549807 - MIR3 SINE MIR -11 197 48 743 309 22 19 chr5 76081054 76081460 -123548690 - LTR16B LTR ERVL 0 464 1 679 250 75 36 chr5 76081501 76081753 -123548397 + MIR SINE MIR 1 262 0 1857 148 71 79 chr5 76081778 76082171 -123547979 + MLT1B LTR MaLR 1 390 0 180 0 0 0 chr5 76083204 76083224 -123546926 + (T)n Simple_repeat Simple_repeat 1 20 0 668 265 12 0 chr5 76083562 76083728 -123546422 - MER5B DNA MER1_type 0 178 11 333 301 144 72 chr5 76085080 76085468 -123544682 + L2 LINE L2 2832 3247 -25 294 304 118 20 chr5 76086202 76086406 -123543744 + MIR SINE MIR 18 241 -21 215 311 0 27 chr5 76087704 76087778 -123542372 - L2 LINE L2 0 3313 3242 2179 283 102 16 chr5 76087853 76088797 -123541353 - L2 LINE L2 -162 3151 2108 1370 253 117 62 chr5 76089174 76089688 -123540462 - MLT1F LTR MaLR 0 542 1 5472 216 47 55 chr5 76089717 76092120 -123538030 - L1MC1 LINE L1 -6 6327 3956 286 242 108 17 chr5 76092222 76092342 -123537808 - MER112 DNA MER1_type -11 249 119 222 129 0 82 chr5 76094103 76094188 -123535962 + (ATTAG)n Simple_repeat Simple_repeat 2 79 0 541 246 171 12 chr5 76094242 76094494 -123535656 - MLT1L LTR MaLR -2 613 322 276 231 0 15 chr5 76095217 76095282 -123534868 - L2 LINE L2 -41 3231 3168 1352 242 78 12 chr5 76097862 76098358 -123531792 + MLT1G LTR MaLR 18 590 0 2426 74 3 0 chr5 76100377 76100676 -123529474 + AluY SINE Alu 1 300 -11 242 314 86 0 chr5 76102479 76102584 -123527566 - LTR16C LTR ERVL -196 295 182 22 0 0 0 chr5 76103257 76103279 -123526871 + AT_rich Low_complexity Low_complexity 1 22 0 451 26 65 0 chr5 76104066 76104143 -123526007 + (TA)n Simple_repeat Simple_repeat 2 83 0 345 313 43 9 chr5 76104261 76104376 -123525774 - L2 LINE L2 -16 3256 3138 1719 155 25 0 chr5 76104836 76105120 -123525030 + L1MA5 LINE L1 6008 6298 -2 1931 203 43 0 chr5 76105355 76105705 -123524445 + MLT1A1 LTR MaLR 1 365 0 955 212 79 81 chr5 76105849 76106268 -123523882 + MLT1A2 LTR MaLR 5 363 -11 193 291 89 0 chr5 76106501 76106580 -123523570 + MER5A DNA MER1_type 2 87 -102 316 242 124 37 chr5 76108075 76108236 -123521914 - MIR3 SINE MIR -15 193 19 888 337 60 8 chr5 76108376 76108762 -123521388 + L2 LINE L2 2380 2785 -529 4509 177 30 49 chr5 76108765 76110600 -123519550 + L1MB8 LINE L1 4381 6173 -5 386 307 11 119 chr5 76110765 76110941 -123519209 + L2 LINE L2 3115 3271 -1 477 260 46 51 chr5 76111148 76111344 -123518806 - L2 LINE L2 0 3313 3119 1547 252 123 7 chr5 76111429 76111894 -123518256 + MLT1F LTR MaLR 8 526 -16 815 250 107 36 chr5 76111898 76112181 -123517969 - L2 LINE L2 -260 3053 2745 2250 113 0 0 chr5 76112181 76112481 -123517669 - AluSx SINE Alu -12 300 1 815 250 107 36 chr5 76112481 76112540 -123517610 - L2 LINE L2 -568 2745 2692 227 223 53 106 chr5 76112806 76112900 -123517250 - MER5B DNA MER1_type -22 156 68 188 276 149 0 chr5 76113054 76113141 -123517009 + L2 LINE L2 3209 3308 -5 661 266 197 26 chr5 76113537 76113841 -123516309 - L2 LINE L2 -405 2909 2554 708 272 0 17 chr5 76113911 76114084 -123516066 - MIR SINE MIR -59 203 34 237 139 0 0 chr5 76114399 76114442 -123515708 + (CA)n Simple_repeat Simple_repeat 1 43 0 204 185 0 0 chr5 76114649 76114703 -123515447 + (TG)n Simple_repeat Simple_repeat 2 55 0 22332 68 5 2 chr5 76116985 76117850 -123512300 + L1P LINE L1 2346 3207 -2939 225 0 0 0 chr5 76117850 76117875 -123512275 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 22332 68 5 2 chr5 76117875 76119913 -123510237 + L1P LINE L1 3207 5258 -888 18394 65 4 3 chr5 76120013 76120139 -123510011 + L1PA6 LINE L1 3085 3209 -2945 225 0 0 0 chr5 76120139 76120164 -123509986 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 18394 65 4 3 chr5 76120164 76123098 -123507052 + L1PA6 LINE L1 3209 6154 0 234 0 0 0 chr5 76123677 76123703 -123506447 + (T)n Simple_repeat Simple_repeat 1 26 0 212 289 13 33 chr5 76123789 76123941 -123506209 + (TA)n Simple_repeat Simple_repeat 1 149 0 237 350 43 8 chr5 76124023 76124140 -123506010 + L2 LINE L2 2918 3038 -234 2120 54 4 8 chr5 76124194 76124453 -123505697 - L1PA5 LINE L1 -2 6152 5895 5092 96 9 1 chr5 76124453 76125152 -123504998 - L1P3 LINE L1 -5146 1315 612 633 137 11 0 chr5 76125137 76125232 -123504918 - L1P3 LINE L1 -6365 96 1 * 236 352 33 43 chr5 76125451 76125661 -123504489 - L2 LINE L2 -350 2964 2757 438 315 90 19 chr5 76125685 76126562 -123503588 - L1ME4a LINE L1 0 6121 5153 1724 227 89 30 chr5 76126710 76127181 -123502969 + MLT1D LTR MaLR 7 505 0 280 92 0 66 chr5 76128174 76128250 -123501900 + (TTCC)n Simple_repeat Simple_repeat 1 71 0 * 904 126 11 22 chr5 76128238 76128420 -123501730 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 331 256 12 12 chr5 76128420 76128506 -123501644 + CT-rich Low_complexity Low_complexity 3 88 0 189 0 0 0 chr5 76129347 76129368 -123500782 + (A)n Simple_repeat Simple_repeat 1 21 0 216 325 26 0 chr5 76130057 76130134 -123500016 + MIR SINE MIR 59 137 -71 580 297 69 4 chr5 76130500 76130732 -123499418 - MIR SINE MIR -11 251 5 30 69 0 0 chr5 76132101 76132159 -123497991 + AT_rich Low_complexity Low_complexity 1 58 0 2060 123 69 34 chr5 76132313 76132663 -123497487 - THE1B LTR MaLR 0 364 3 216 135 0 0 chr5 76132890 76132927 -123497223 + (TA)n Simple_repeat Simple_repeat 2 38 0 763 296 51 16 chr5 76132997 76133308 -123496842 - L1ME LINE L1 -381 5740 5419 840 217 106 26 chr5 76133831 76134138 -123496012 + MLT1G1 LTR MaLR 1 288 -302 416 313 24 59 chr5 76134229 76134517 -123495633 - L2 LINE L2 -191 3081 2804 204 40 0 0 chr5 76134642 76134667 -123495483 + (T)n Simple_repeat Simple_repeat 1 25 0 201 184 0 41 chr5 76134885 76134934 -123495216 + CT-rich Low_complexity Low_complexity 1 47 0 800 266 50 0 chr5 76135432 76135631 -123494519 - MER58A DNA MER1_type -10 214 6 442 306 76 0 chr5 76135639 76135783 -123494367 - MIR3 SINE MIR -48 160 6 989 140 154 37 chr5 76136646 76136962 -123493188 - MSTA LTR MaLR 0 428 1 457 291 79 13 chr5 76137799 76137998 -123492152 - MIR SINE MIR -44 218 3 26 0 0 0 chr5 76138424 76138450 -123491700 + AT_rich Low_complexity Low_complexity 1 26 0 300 299 45 38 chr5 76142001 76142158 -123487992 - L1MEd LINE L1 -5951 168 11 303 259 0 0 chr5 76142167 76142221 -123487929 - MIR SINE MIR -180 82 29 433 332 79 11 chr5 76143090 76143280 -123486870 + MIR SINE MIR 23 225 -37 1153 113 43 27 chr5 76144329 76144515 -123485635 + MER5A DNA MER1_type 1 189 0 2157 260 70 48 chr5 76145022 76145691 -123484459 - MER115 DNA AcHobo 0 693 10 271 276 128 13 chr5 76146795 76146951 -123483199 + L1ME LINE L1 5549 5722 -399 2125 300 154 28 chr5 76146988 76148199 -123481951 + L2 LINE L2 1548 2911 -403 405 304 29 71 chr5 76148378 76148618 -123481532 - MLT1J LTR MaLR -42 469 240 2178 167 15 26 chr5 76148877 76149267 -123480883 + MLT1B LTR MaLR 1 386 -4 456 269 108 0 chr5 76149275 76149405 -123480745 - MIR SINE MIR -112 150 7 738 227 167 15 chr5 76150328 76150645 -123479505 - MLT1G1 LTR MaLR 0 595 207 221 271 17 0 chr5 76150661 76150720 -123479430 + GA-rich Low_complexity Low_complexity 4 63 0 230 266 165 25 chr5 76150758 76150837 -123479313 - MLT1G1 LTR MaLR -410 145 56 685 159 7 7 chr5 76151416 76151561 -123478589 + GA-rich Low_complexity Low_complexity 2 146 0 1668 118 6 109 chr5 76151678 76152007 -123478143 + AluJb SINE Alu 1 295 -17 238 113 19 19 chr5 76153294 76153347 -123476803 + (CA)n Simple_repeat Simple_repeat 1 53 0 219 133 0 0 chr5 76153392 76153437 -123476713 + (CA)n Simple_repeat Simple_repeat 1 45 0 564 246 59 20 chr5 76154316 76154518 -123475632 + MIR SINE MIR 4 224 -38 229 183 28 99 chr5 76154578 76154649 -123475501 - L2 LINE L2 -41 3272 3207 276 174 103 0 chr5 76155121 76155198 -123474952 - MER5A DNA MER1_type -71 107 25 9459 144 21 5 chr5 76155371 76157953 -123472197 + L1MA4A LINE L1 3670 6294 -9 214 257 37 37 chr5 76161280 76161389 -123468761 + L2 LINE L2 2951 3059 -213 688 335 36 0 chr5 76161414 76161662 -123468488 + MIR SINE MIR 6 262 0 350 331 39 0 chr5 76162661 76162791 -123467359 - MIR3 SINE MIR -16 192 58 522 232 188 11 chr5 76162924 76163105 -123467045 + MER112 DNA MER1_type 4 216 -44 595 297 184 12 chr5 76163135 76163478 -123466672 - LTR16C LTR ERVL 0 491 90 2139 93 62 0 chr5 76163683 76163974 -123466176 + AluSp SINE Alu 5 313 0 209 244 218 0 chr5 76164608 76164686 -123465464 + MIR SINE MIR 33 127 -81 234 266 63 51 chr5 76165017 76165096 -123465054 - L2 LINE L2 -17 3255 3176 261 325 122 0 chr5 76165420 76165608 -123464542 + L2 LINE L2 1784 1994 -1320 2079 126 7 10 chr5 76165611 76165913 -123464237 - AluSx SINE Alu -11 301 1 480 262 93 12 chr5 76165935 76166107 -123464043 - L1ME3A LINE L1 -9 6161 5976 267 274 74 17 chr5 76166111 76166295 -123463855 + LTR16A LTR ERVL 4 195 -255 300 27 0 0 chr5 76166319 76166356 -123463794 + (TG)n Simple_repeat Simple_repeat 2 38 0 773 201 49 35 chr5 76166360 76166504 -123463646 - FRAM SINE Alu -31 145 1 481 281 92 0 chr5 76166518 76166682 -123463468 + LTR16A LTR ERVL 263 441 -9 1140 289 52 14 chr5 76166698 76167137 -123463013 - L1ME3A LINE L1 -199 5971 5516 285 163 0 0 chr5 76167138 76167181 -123462969 + MER58 DNA MER1_type 2378 2420 0 1786 194 24 9 chr5 76167306 76167641 -123462509 - MER58B DNA MER1_type 0 341 2 623 255 235 10 chr5 76168054 76168254 -123461896 + MIR SINE MIR 18 262 0 1595 193 0 30 chr5 76168292 76168588 -123461562 + AluJb SINE Alu 1 287 -25 615 267 113 18 chr5 76168840 76169061 -123461089 + MIR SINE MIR 10 251 -11 733 164 9 0 chr5 76169899 76170015 -123460135 + FLAM_C SINE Alu 1 117 -26 31 44 0 0 chr5 76170015 76170060 -123460090 + AT_rich Low_complexity Low_complexity 1 45 0 182 37 37 0 chr5 76170108 76170135 -123460015 + (TG)n Simple_repeat Simple_repeat 1 28 0 702 230 34 45 chr5 76172853 76173118 -123457032 - L1ME LINE L1 -1296 4850 4589 * 1650 221 66 22 chr5 76173114 76173876 -123456274 + L1ME LINE L1 4858 5686 -480 276 133 44 0 chr5 76174116 76174161 -123455989 - HSMAR1 DNA Mariner -1240 47 1 243 0 0 0 chr5 76174216 76174243 -123455907 + (TG)n Simple_repeat Simple_repeat 2 28 0 565 272 29 29 chr5 76176613 76176786 -123453364 - MIR3 SINE MIR -33 175 3 220 333 56 39 chr5 76176951 76177131 -123453019 - L3b LINE CR1 -272 1311 1129 219 325 143 24 chr5 76178724 76178850 -123451300 + MIR SINE MIR 35 175 -87 187 235 71 82 chr5 76178855 76178953 -123451197 + L2 LINE L2 2661 2757 -557 629 314 110 24 chr5 76179054 76179727 -123450423 - L2 LINE L2 -60 3253 2519 200 137 20 0 chr5 76180199 76180250 -123449900 + CT-rich Low_complexity Low_complexity 1 52 0 669 152 249 109 chr5 76180251 76180508 -123449642 - L1MD2 LINE L1 -20 6339 6047 * 4912 180 69 29 chr5 76180506 76181676 -123448474 - L1MDa LINE L1 -4230 2310 1094 471 295 39 0 chr5 76181806 76181935 -123448215 + MIR SINE MIR 11 144 -118 651 138 108 36 chr5 76182198 76182365 -123447785 + MER53 DNA DNA 3 181 -8 21 0 0 0 chr5 76184132 76184153 -123445997 + AT_rich Low_complexity Low_complexity 1 21 0 314 271 41 25 chr5 76184186 76184308 -123445842 + LTR37B LTR ERV1 10 133 -335 513 219 116 44 chr5 76184468 76184719 -123445431 + LTR37B LTR ERV1 197 465 -3 300 252 78 17 chr5 76185977 76186092 -123444058 - L1ME4a LINE L1 -18 6103 5982 284 241 316 0 chr5 76186692 76186825 -123443325 - MER5A DNA MER1_type -6 183 9 364 254 26 44 chr5 76187329 76187443 -123442707 - L1ME4a LINE L1 -406 5715 5604 442 218 0 23 chr5 76189814 76189901 -123440249 - MIR SINE MIR -111 151 67 1504 174 169 17 chr5 76190062 76190418 -123439732 + LTR52 LTR ERVL 1 410 -11 987 265 108 21 chr5 76190438 76190875 -123439275 + LTR33 LTR ERVL 47 521 0 326 252 37 74 chr5 76190875 76191010 -123439140 + MIR SINE MIR 113 242 -20 241 213 147 13 chr5 76191001 76191076 -123439074 + MIR SINE MIR 105 189 -73 * 447 321 86 16 chr5 76192102 76192289 -123437861 + MIR SINE MIR 20 219 -43 376 265 10 20 chr5 76192405 76192503 -123437647 + MIR SINE MIR 23 119 -89 743 234 42 42 chr5 76193068 76193307 -123436843 - L2 LINE L2 0 3313 3075 247 311 208 11 chr5 76193370 76193553 -123436597 - L2 LINE L2 -354 2960 2742 1977 150 0 0 chr5 76194256 76194542 -123435608 + AluSx SINE Alu 1 286 -26 270 143 0 0 chr5 76194557 76194606 -123435544 + (TA)n Simple_repeat Simple_repeat 2 50 0 207 0 0 0 chr5 76195098 76195121 -123435029 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 5256 157 16 29 chr5 76197421 76198552 -123431598 - L1 LINE L1 -1361 4785 3670 5212 128 39 15 chr5 76199266 76200268 -123429882 - L1MA4A LINE L1 -122 6181 5156 405 331 20 20 chr5 76200566 76200714 -123429436 + MIR SINE MIR 2 149 -113 336 329 151 53 chr5 76200838 76201034 -123429116 + L2 LINE L2 2158 2334 -980 1825 184 33 55 chr5 76201034 76201431 -123428719 + MLT1B LTR MaLR 3 390 0 336 329 151 53 chr5 76201431 76201739 -123428411 + L2 LINE L2 2334 2711 -603 219 223 43 25 chr5 76203890 76203966 -123426184 + MIR SINE MIR 4 79 -133 1512 173 84 0 chr5 76204900 76205184 -123424966 + AluJo SINE Alu 1 308 -4 341 276 97 33 chr5 76205240 76205533 -123424617 - L1MC4a LINE L1 -72 6049 5735 227 245 61 71 chr5 76205533 76205631 -123424519 + LTR48B LTR ERV1 1 97 -547 * 1151 227 99 62 chr5 76205608 76206040 -123424110 + MER39 LTR ERV1 260 707 0 3470 204 73 52 chr5 76206231 76206861 -123423289 + L1ME1 LINE L1 4862 5477 -689 1917 127 109 29 chr5 76206861 76207208 -123422942 - THE1C LTR MaLR 0 375 1 3470 204 73 52 chr5 76207208 76207830 -123422320 + L1ME1 LINE L1 5477 6165 -1 210 71 0 0 chr5 76208391 76208419 -123421731 + (ATGGTG)n Simple_repeat Simple_repeat 5 32 0 570 326 0 0 chr5 76208442 76208617 -123421533 - MIR SINE MIR -13 249 75 309 294 227 10 chr5 76209162 76209356 -123420794 - MIR SINE MIR -14 248 13 22 35 0 0 chr5 76209835 76209864 -123420286 + AT_rich Low_complexity Low_complexity 1 29 0 769 209 30 85 chr5 76209940 76210175 -123419975 + L1ME3A LINE L1 5949 6170 0 2534 144 58 0 chr5 76210721 76211102 -123419048 + MER57A LTR ERV1 1 403 0 396 229 28 49 chr5 76211285 76211429 -123418721 + L1MC5 LINE L1 7786 7926 -35 425 312 194 16 chr5 76211678 76211864 -123418286 + MIR SINE MIR 25 243 -19 2541 144 11 74 chr5 76212676 76213135 -123417015 + MSTB1 LTR MaLR 3 432 0 509 286 84 6 chr5 76214589 76214767 -123415383 + MER117 DNA MER1_type 4 195 -2 2059 191 179 32 chr5 76214800 76215442 -123414708 - LTR48 LTR ERV1 0 787 1 476 313 172 35 chr5 76215626 76216080 -123414070 + MLT1K LTR MaLR 46 561 -27 243 0 0 0 chr5 76217350 76217377 -123412773 + (T)n Simple_repeat Simple_repeat 1 27 0 2224 102 25 125 chr5 76218405 76218811 -123411339 + MER4D LTR ERV1 1 446 -457 1863 175 0 3 chr5 76218811 76219108 -123411042 + AluSx SINE Alu 1 296 -16 2224 102 25 125 chr5 76219108 76219398 -123410752 + MER4D LTR ERV1 446 903 0 305 327 123 6 chr5 76220384 76220546 -123409604 - MIR SINE MIR -8 254 74 913 260 20 4 chr5 76223204 76223450 -123406700 - MIR SINE MIR -1 261 12 2058 163 0 3 chr5 76223815 76224128 -123406022 + 7SLRNA srpRNA srpRNA 1 312 -8 3543 163 79 26 chr5 76225215 76225898 -123404252 + L1MB2 LINE L1 5446 6164 -7 229 250 0 83 chr5 76226996 76227068 -123403082 + L2 LINE L2 3238 3303 -10 432 250 56 14 chr5 76230131 76230275 -123399875 + LTR33A LTR ERVL 374 523 0 1235 265 101 3 chr5 76230479 76230856 -123399294 + LTR16A LTR ERVL 16 429 -21 1660 149 26 128 chr5 76230873 76231112 -123399038 - MLT1B LTR MaLR -10 380 201 2328 91 3 3 chr5 76231112 76231409 -123398741 - AluSc SINE Alu -12 297 1 1660 149 26 128 chr5 76231409 76231592 -123398558 - MLT1B LTR MaLR -189 201 1 2174 127 3 13 chr5 76232104 76232418 -123397732 - AluSx SINE Alu -1 311 1 229 250 18 0 chr5 76233840 76233896 -123396254 + C-rich Low_complexity Low_complexity 3 59 0 247 328 26 43 chr5 76234693 76234809 -123395341 + MIR3 SINE MIR 10 123 -85 217 247 91 13 chr5 76234906 76234983 -123395167 - MIR SINE MIR -114 148 66 185 248 15 181 chr5 76235603 76235736 -123394414 + MIR3 SINE MIR 97 207 -1 1580 84 75 0 chr5 76235835 76236049 -123394101 - MER30 DNA MER1_type 0 230 1 210 171 0 0 chr5 76236110 76236151 -123393999 + CT-rich Low_complexity Low_complexity 2 42 0 3574 61 47 0 chr5 76236467 76236891 -123393259 - MLT2A1 LTR ERVL 0 444 1 224 255 82 0 chr5 76237929 76237996 -123392154 - MIR SINE MIR -63 145 80 269 304 78 0 chr5 76238874 76238989 -123391161 - MER117 DNA MER1_type -68 129 6 290 275 62 166 chr5 76239207 76239640 -123390510 + L2 LINE L2 2871 3258 -14 330 241 123 47 chr5 76239810 76239980 -123390170 - MLT1L LTR MaLR 0 615 433 271 144 7 19 chr5 76240062 76240115 -123390035 - MLT1I LTR MaLR -269 140 98 295 221 91 13 chr5 76240213 76240290 -123389860 - MLT1L LTR MaLR -518 97 15 368 188 0 59 chr5 76240590 76240675 -123389475 + L1ME3A LINE L1 5512 5591 -571 2565 212 31 23 chr5 76240678 76241283 -123388867 - MER74B LTR ERVL 0 622 13 667 269 162 15 chr5 76241285 76241612 -123388538 + L1ME3A LINE L1 5590 5964 -206 237 202 45 67 chr5 76241654 76241743 -123388407 + L1ME3A LINE L1 5961 6047 -123 25 0 0 0 chr5 76242169 76242194 -123387956 + AT_rich Low_complexity Low_complexity 1 25 0 254 284 23 0 chr5 76244099 76244187 -123385963 - MER97a DNA MER1_type? 0 894 805 202 206 0 0 chr5 76244266 76244300 -123385850 + polypurine Low_complexity Low_complexity 3 36 0 2471 207 103 63 chr5 76244438 76244957 -123385193 - MER97b DNA MER1_type? -194 859 362 2384 81 7 0 chr5 76244957 76245254 -123384896 + AluSg SINE Alu 1 299 -11 2471 207 103 63 chr5 76245254 76245447 -123384703 - MER97b DNA MER1_type? -691 362 107 1777 174 3 3 chr5 76245447 76245757 -123384393 + AluJo SINE Alu 1 310 -2 2471 207 103 63 chr5 76245757 76245869 -123384281 - MER97b DNA MER1_type? -946 107 1 275 338 35 25 chr5 76245985 76246186 -123383964 - MIR SINE MIR -12 250 48 404 187 47 12 chr5 76246447 76246618 -123383532 + CT-rich Low_complexity Low_complexity 2 178 0 788 267 126 61 chr5 76247475 76247951 -123382199 - MLT1J LTR MaLR 0 511 5 450 310 5 13 chr5 76248140 76248315 -123381835 - MIR SINE MIR -70 192 20 466 126 11 21 chr5 76248324 76248419 -123381731 + (TTCC)n Simple_repeat Simple_repeat 2 95 0 341 238 66 25 chr5 76248707 76248829 -123381321 - L1ME3A LINE L1 -287 5883 5757 712 286 25 8 chr5 76248837 76249078 -123381072 - MIR SINE MIR -11 251 7 481 306 71 21 chr5 76249315 76249655 -123380495 - L1ME3A LINE L1 -518 5646 5290 847 205 23 0 chr5 76249691 76249862 -123380288 - L1PA15 LINE L1 0 6165 5991 288 279 80 55 chr5 76250078 76250279 -123379871 - L1ME3A LINE L1 -1157 4989 4784 3236 44 0 0 chr5 76250552 76250937 -123379213 - L1PA5 LINE L1 0 6154 5770 42768 56 8 1 chr5 76250945 76257056 -123373094 - L1PA3 LINE L1 0 6155 1 1894 159 0 23 chr5 76257527 76257835 -123372315 + AluJb SINE Alu 11 311 -1 467 322 113 19 chr5 76259207 76259570 -123370580 - L2 LINE L2 0 3313 2917 614 281 92 8 chr5 76261145 76261383 -123368767 + MIR SINE MIR 2 259 -3 234 195 65 89 chr5 76261370 76261493 -123368657 - MIR SINE MIR -3 259 140 * 279 327 96 25 chr5 76262373 76262572 -123367578 - MIR SINE MIR -4 258 46 2229 197 40 59 chr5 76262667 76262831 -123367319 + LTR53 LTR ERVL 1 167 -352 953 136 62 43 chr5 76262831 76262993 -123367157 + FRAM SINE Alu 1 165 -1 2293 104 3 3 chr5 76263001 76263300 -123366850 + AluSg SINE Alu 1 299 -11 2229 197 40 59 chr5 76263300 76263655 -123366495 + LTR53 LTR ERVL 174 519 0 584 230 137 15 chr5 76263759 76263963 -123366187 + MIR SINE MIR 14 242 -20 590 262 36 6 chr5 76264349 76264517 -123365633 - MIR SINE MIR 0 262 90 283 289 10 21 chr5 76264520 76264617 -123365533 - MER5B DNA MER1_type -77 101 6 489 235 175 0 chr5 76264884 76265050 -123365100 - MIR SINE MIR -37 225 31 496 219 0 0 chr5 76265160 76265256 -123364894 - MLT1C LTR MaLR -1 466 371 1346 220 39 57 chr5 76265258 76265743 -123364407 - MER39 LTR ERV1 -2 687 67 1437 171 38 8 chr5 76265774 76266038 -123364112 - MLT1C LTR MaLR -189 278 7 964 284 83 26 chr5 76268815 76269414 -123360736 - MER115 DNA AcHobo 0 693 30 1111 215 104 102 chr5 76271165 76271734 -123358416 - MLT1G1 LTR MaLR -1 554 1 186 237 140 54 chr5 76272280 76272373 -123357777 + MIR SINE MIR 60 160 -102 197 192 0 19 chr5 76273809 76273861 -123356289 + GA-rich Low_complexity Low_complexity 2 52 0 381 226 11 21 chr5 76274088 76274181 -123355969 + MER96 DNA MER1_type? 82 173 -2 470 271 28 72 chr5 76274197 76274241 -123355909 + MER5B DNA MER1_type 5 49 -129 1986 161 0 0 chr5 76274241 76274551 -123355599 - AluSx SINE Alu -2 310 1 470 271 28 72 chr5 76274551 76274687 -123355463 + MER5B DNA MER1_type 49 177 -1 2106 95 0 41 chr5 76275176 76275495 -123354655 + AluSc SINE Alu 1 307 0 243 164 82 49 chr5 76277458 76277519 -123352631 + MLT1L LTR MaLR 217 279 -336 246 275 12 12 chr5 76277780 76277860 -123352290 - MIR SINE MIR -96 166 87 21 0 0 0 chr5 76278486 76278507 -123351643 + AT_rich Low_complexity Low_complexity 1 21 0 304 372 24 0 chr5 76278973 76279137 -123351013 - MIR SINE MIR -7 255 88 315 0 0 0 chr5 76279195 76279230 -123350920 + (CA)n Simple_repeat Simple_repeat 2 36 0 530 288 102 27 chr5 76281429 76281754 -123348396 + L1ME4a LINE L1 5267 5566 -555 1546 183 60 52 chr5 76281754 76282121 -123348029 + MLT1A2 LTR MaLR 1 370 -4 530 288 102 27 chr5 76282121 76282447 -123347703 + L1ME4a LINE L1 5566 5973 -148 1682 178 0 20 chr5 76282906 76283209 -123346941 + AluJo SINE Alu 5 301 -11 283 299 192 11 chr5 76283327 76283504 -123346646 + L3 LINE CR1 1274 1482 -95 25 90 0 0 chr5 76283528 76283595 -123346555 + AT_rich Low_complexity Low_complexity 1 67 0 302 250 196 9 chr5 76283683 76283795 -123346355 + MER94 DNA DNA 2 134 0 1430 193 35 64 chr5 76284964 76285331 -123344819 - MLT1A1 LTR MaLR -3 362 9 379 247 11 11 chr5 76286344 76286437 -123343713 + MIR SINE MIR 21 113 -95 1636 112 80 31 chr5 76286506 76286792 -123343358 + AluSq SINE Alu 1 300 -13 1671 171 0 30 chr5 76286913 76287217 -123342933 + AluJb SINE Alu 1 295 -17 192 77 0 0 chr5 76290907 76290933 -123339217 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2366 152 55 2 chr5 76291061 76291463 -123338687 + MSTC LTR MaLR 4 426 -2 317 296 53 40 chr5 76291508 76291660 -123338490 + MIR3 SINE MIR 49 202 -6 258 283 81 10 chr5 76291941 76292040 -123338110 - MIR SINE MIR -102 160 55 305 345 65 29 chr5 76292102 76292241 -123337909 + MIR3 SINE MIR 7 150 -58 721 224 0 137 chr5 76292250 76292469 -123337681 + MER5A DNA MER1_type 1 189 0 240 241 0 0 chr5 76292469 76292521 -123337629 + L3 LINE CR1 1526 1577 0 663 243 32 29 chr5 76293841 76294014 -123336136 - MIR SINE MIR -63 145 6 313 224 61 98 chr5 76294030 76294120 -123336030 - MLT1L LTR MaLR 0 615 523 2265 103 3 0 chr5 76294120 76294412 -123335738 + AluSx SINE Alu 13 305 -7 313 224 61 98 chr5 76294412 76294605 -123335545 - MLT1L LTR MaLR -92 523 242 380 324 48 68 chr5 76294672 76294922 -123335228 - MLT1L LTR MaLR -370 245 1 510 310 112 29 chr5 76295808 76296256 -123333894 + L1ME4a LINE L1 5636 6120 -1 24 0 0 0 chr5 76296275 76296299 -123333851 + AT_rich Low_complexity Low_complexity 1 24 0 326 307 93 46 chr5 76296623 76296925 -123333225 - L1M4 LINE L1 -814 5332 5005 1998 185 77 13 chr5 76296925 76297304 -123332846 - MER57A LTR ERV1 0 403 1 326 307 93 46 chr5 76297304 76297411 -123332739 - L1M4 LINE L1 -1141 5005 4904 2432 63 0 3 chr5 76297447 76297750 -123332400 - AluY SINE Alu -9 302 1 324 249 58 46 chr5 76297937 76298110 -123332040 - L1M4 LINE L1 -1440 4706 4532 2323 220 49 21 chr5 76298493 76299024 -123331126 - MLT1E LTR MaLR -2 591 46 278 319 178 6 chr5 76299687 76299844 -123330306 - MIR SINE MIR -71 191 8 1825 169 102 6 chr5 76300271 76300603 -123329547 - MLT1A1 LTR MaLR -1 364 1 1056 205 22 0 chr5 76301102 76301287 -123328863 + MER5A DNA MER1_type 1 189 0 203 128 77 0 chr5 76301297 76301336 -123328814 + MIR SINE MIR 160 201 -61 203 175 25 0 chr5 76302023 76302063 -123328087 + MIR SINE MIR 220 260 -2 186 276 92 46 chr5 76302526 76302613 -123327537 - MIR SINE MIR -94 114 24 665 224 110 113 chr5 76302684 76302962 -123327188 + MER102b DNA MER1_type 3 281 -1147 2492 138 18 5 chr5 76302962 76303347 -123326803 - MLT1B LTR MaLR 0 390 1 665 224 110 113 chr5 76303347 76303403 -123326747 + MER102b DNA MER1_type 281 336 -5 518 143 0 0 chr5 76303894 76303971 -123326179 + MADE1 DNA Mariner 1 77 -3 364 323 49 18 chr5 76304035 76304199 -123325951 + MIR3 SINE MIR 33 201 -7 1205 248 97 21 chr5 76304729 76305112 -123325038 + MLT1J2 LTR MaLR 25 436 -14 578 195 207 24 chr5 76305523 76305692 -123324458 + MER105 DNA DNA 1 200 -4 407 59 0 0 chr5 76306367 76306418 -123323732 + MADE1 DNA Mariner 1 51 -29 292 310 10 10 chr5 76306771 76306871 -123323279 + L3b LINE CR1 1171 1270 -313 411 304 53 110 chr5 76307465 76307939 -123322211 + L2 LINE L2 2826 3272 0 2179 110 0 0 chr5 76309589 76309870 -123320280 - AluSc SINE Alu -28 281 1 207 287 160 0 chr5 76311200 76311294 -123318856 - MIR SINE MIR -80 128 20 3730 164 25 5 chr5 76311341 76311934 -123318216 + MER6A DNA MER2_type 1 605 0 330 300 160 8 chr5 76312238 76312488 -123317662 - L2 LINE L2 -1 3312 3025 217 347 53 27 chr5 76312578 76312728 -123317422 + L2 LINE L2 2901 3054 -218 236 270 87 35 chr5 76317796 76317911 -123312239 + MLT1K LTR MaLR 314 434 -154 692 178 17 0 chr5 76319609 76319727 -123310423 - MLT1C LTR MaLR -347 120 1 24 53 0 0 chr5 76320939 76320977 -123309173 + AT_rich Low_complexity Low_complexity 1 38 0 185 0 0 39 chr5 76321030 76321056 -123309094 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 623 293 37 21 chr5 76322207 76322395 -123307755 + MIR SINE MIR 31 221 -41 206 310 29 82 chr5 76324229 76324400 -123305750 + MIR SINE MIR 40 201 -61 265 260 130 0 chr5 76325650 76325727 -123304423 + MIR3 SINE MIR 115 201 -7 1080 231 5 5 chr5 76325754 76325970 -123304180 - MER58A DNA MER1_type 0 224 9 360 0 0 0 chr5 76326125 76326165 -123303985 + (CA)n Simple_repeat Simple_repeat 2 41 0 564 174 0 0 chr5 76326367 76326465 -123303685 + MER5A DNA MER1_type 13 110 -79 723 287 87 38 chr5 76326518 76326983 -123303167 - LTR33 LTR ERVL -9 512 8 226 212 121 91 chr5 76327534 76327603 -123302547 + MIR SINE MIR 67 141 -121 1735 183 10 80 chr5 76327603 76328002 -123302148 + MER93b LTR ERV1 3 373 0 226 212 121 91 chr5 76328002 76328031 -123302119 + MIR SINE MIR 141 168 -94 317 152 30 0 chr5 76328897 76328963 -123301187 + GA-rich Low_complexity Low_complexity 3 70 0 619 152 13 32 chr5 76328980 76329138 -123301012 + GA-rich Low_complexity Low_complexity 2 156 0 3050 116 21 12 chr5 76329152 76329576 -123300574 - MSTA LTR MaLR 0 428 1 2880 165 22 51 chr5 76330516 76330560 -123299590 - L1MB3 LINE L1 -8 6175 6131 1886 153 4 0 chr5 76330560 76330841 -123299309 - AluJo SINE Alu -20 292 11 2880 165 22 51 chr5 76330841 76331348 -123298802 - L1MB3 LINE L1 -52 6131 5640 23 54 0 0 chr5 76331549 76331586 -123298564 + AT_rich Low_complexity Low_complexity 1 37 0 225 116 47 0 chr5 76332660 76332703 -123297447 - L2 LINE L2 -94 3219 3175 1877 177 89 87 chr5 76332837 76333322 -123296828 - MLT1D LTR MaLR -2 503 18 2403 67 0 0 chr5 76333411 76333710 -123296440 + AluY SINE Alu 1 299 -12 261 255 28 75 chr5 76334250 76334356 -123295794 - MIR3 SINE MIR -106 102 2 334 263 30 10 chr5 76335148 76335247 -123294903 + L2 LINE L2 2933 3033 -239 429 180 70 78 chr5 76335291 76335419 -123294731 + LTR28 LTR ERV1 1 178 -298 604 163 0 0 chr5 76335419 76335505 -123294645 - AluS SINE Alu -225 88 3 2548 174 128 91 chr5 76335511 76336260 -123293890 + LTR28 LTR ERV1 244 1020 0 463 270 68 54 chr5 76336334 76336482 -123293668 + L2 LINE L2 3122 3271 -1 214 254 34 34 chr5 76336936 76336995 -123293155 + MIR SINE MIR 183 241 -21 282 56 0 0 chr5 76337664 76337700 -123292450 + (CA)n Simple_repeat Simple_repeat 2 37 0 1244 234 26 29 chr5 76340807 76341114 -123289036 + L1MC4a LINE L1 6518 6823 -985 2873 99 29 2 chr5 76341135 76341579 -123288571 - L1PA7 LINE L1 -2276 3870 3415 11497 87 11 5 chr5 76341578 76343856 -123286294 + L1PA7 LINE L1 3867 6154 0 2527 228 43 9 chr5 76343865 76344671 -123285479 + L1MC4 LINE L1 6915 7900 -142 192 291 36 0 chr5 76344810 76344865 -123285285 + L2 LINE L2 3249 3305 -8 649 249 178 0 chr5 76344944 76345129 -123285021 - MIR SINE MIR -7 255 38 1311 288 74 9 chr5 76346402 76346833 -123283317 + LTR16C LTR ERVL 33 491 0 294 29 0 0 chr5 76348308 76348343 -123281807 + (CA)n Simple_repeat Simple_repeat 1 35 0 276 315 37 46 chr5 76348387 76348495 -123281655 + L2 LINE L2 3195 3301 -12 2281 118 7 0 chr5 76348672 76348978 -123281172 - AluSx SINE Alu -4 308 1 209 306 83 0 chr5 76349244 76349316 -123280834 + L2 LINE L2 3182 3259 -13 189 0 0 0 chr5 76349316 76349337 -123280813 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 2323 94 0 0 chr5 76349468 76349765 -123280385 + AluSg SINE Alu 1 297 -13 369 265 36 82 chr5 76349779 76350040 -123280110 + LTR16A1 LTR ERVL 185 400 -57 2062 131 3 13 chr5 76351639 76351944 -123278206 + AluSx SINE Alu 1 302 -10 392 208 90 0 chr5 76353114 76353213 -123276937 - L1ME1 LINE L1 -223 5943 5847 240 283 92 54 chr5 76353214 76353398 -123276752 - MLT1L LTR MaLR -228 387 197 231 154 26 0 chr5 76353388 76353427 -123276723 - LTR67 LTR ERVL -410 147 108 * 564 301 6 18 chr5 76353656 76353819 -123276331 + MIR SINE MIR 102 262 0 308 295 58 40 chr5 76353911 76354084 -123276066 - L2 LINE L2 -210 3062 2887 230 279 63 13 chr5 76354104 76354183 -123275967 - MIR SINE MIR -21 241 159 1273 203 56 101 chr5 76354183 76354227 -123275923 - MLT2C2 LTR ERVL 0 464 420 1703 181 70 28 chr5 76354227 76354586 -123275564 - MLT1A2 LTR MaLR 0 374 1 1273 203 56 101 chr5 76354586 76355024 -123275126 - MLT2C2 LTR ERVL -44 420 4 315 216 43 78 chr5 76355040 76355175 -123274975 - MIR SINE MIR -68 140 5 710 199 39 68 chr5 76355407 76355613 -123274537 - MER3 DNA MER1_type 0 209 10 4313 223 68 55 chr5 76356613 76357067 -123273083 + L1MDa LINE L1 31 478 -6062 1383 216 120 38 chr5 76357067 76357433 -123272717 + MSTD LTR MaLR 1 396 0 4313 223 68 55 chr5 76357433 76357789 -123272361 + L1MDa LINE L1 478 828 -5712 2879 142 12 5 chr5 76357789 76358211 -123271939 + MSTB LTR MaLR 2 426 0 4313 223 68 55 chr5 76358211 76358262 -123271888 + L1MDa LINE L1 828 877 -5663 2857 131 11 21 chr5 76358262 76358698 -123271452 - MSTB1 LTR MaLR 0 432 1 4313 223 68 55 chr5 76358698 76359088 -123271062 + L1MDa LINE L1 877 1300 -5240 532 234 78 0 chr5 76359099 76359227 -123270923 - L1M2 LINE L1 -6701 148 11 437 110 0 14 chr5 76359237 76359310 -123270840 + L1MD1 LINE L1 6171 6242 0 840 142 15 22 chr5 76359318 76359452 -123270698 + FLAM_C SINE Alu 1 133 0 1859 178 0 10 chr5 76360310 76360445 -123269705 + AluJb SINE Alu 1 136 -176 2402 90 0 7 chr5 76360445 76360755 -123269395 + AluSg SINE Alu 1 308 -2 1859 178 0 10 chr5 76360755 76360928 -123269222 + AluJb SINE Alu 136 306 -6 430 266 162 0 chr5 76361974 76362128 -123268022 - MIR SINE MIR -65 197 19 1138 110 164 18 chr5 76362169 76362388 -123267762 - MSTA LTR MaLR -177 251 1 216 0 0 0 chr5 76362819 76362843 -123267307 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1471 152 71 50 chr5 76362845 76363128 -123267022 - AluJb SINE Alu -23 289 1 251 367 47 33 chr5 76363589 76363804 -123266346 + L3 LINE CR1 366 583 -994 2843 167 26 0 chr5 76365218 76365680 -123264470 + MLT2B1 LTR ERVL 1 474 -46 271 132 0 57 chr5 76365709 76365762 -123264388 + MLT2B1 LTR ERVL 464 513 -7 465 277 28 14 chr5 76366096 76366237 -123263913 + MIR3 SINE MIR 61 203 -5 216 67 0 0 chr5 76367668 76367698 -123262452 + (CA)n Simple_repeat Simple_repeat 2 31 0 2110 201 77 36 chr5 76368369 76368901 -123261249 + MLT2B3 LTR ERVL 1 554 0 4589 170 31 79 chr5 76368904 76369811 -123260339 + MER6 DNA MER2_type 1 863 -2 1658 121 4 0 chr5 76369867 76370098 -123260052 + AluSg/x SINE Alu 65 296 -16 366 80 0 0 chr5 76370100 76370150 -123260000 + L1MB3 LINE L1 6134 6183 0 240 35 0 0 chr5 76370316 76370345 -123259805 + (T)n Simple_repeat Simple_repeat 1 29 0 2205 122 3 0 chr5 76370866 76371160 -123258990 + AluSx SINE Alu 1 295 -17 958 208 0 0 chr5 76371423 76371582 -123258568 + FAM SINE Alu 5 163 -12 889 272 83 20 chr5 76372615 76373087 -123257063 + L1ME4a LINE L1 5255 5775 -346 612 141 47 47 chr5 76373157 76373306 -123256844 + L1ME4a LINE L1 5969 6117 -4 828 150 0 24 chr5 76373312 76373439 -123256711 - AluJb SINE Alu -187 125 2 27 29 0 0 chr5 76373442 76373476 -123256674 + AT_rich Low_complexity Low_complexity 1 34 0 181 213 191 0 chr5 76373902 76373949 -123256201 + L3 LINE CR1 419 474 -1103 1668 320 102 41 chr5 76374447 76375432 -123254718 + L2 LINE L2 2258 3313 0 183 320 13 0 chr5 76375553 76375631 -123254519 - MIR SINE MIR -114 148 70 319 164 201 60 chr5 76376599 76376699 -123253451 - MER103 DNA DNA -12 154 29 1725 202 56 19 chr5 76376699 76377075 -123253075 + MLT1B LTR MaLR 1 390 0 319 164 201 60 chr5 76377075 76377108 -123253042 - MER103 DNA DNA -137 29 2 2031 137 43 0 chr5 76377143 76377442 -123252708 - AluSx SINE Alu 0 312 1 425 295 124 42 chr5 76377729 76377835 -123252315 - MIR SINE MIR 0 262 166 1419 217 71 6 chr5 76377835 76378158 -123251992 - MER2 DNA MER2_type 0 344 1 425 295 124 42 chr5 76378158 76378292 -123251858 - MIR SINE MIR -96 166 2 1331 233 24 47 chr5 76378925 76379463 -123250687 - MLT2C2 LTR ERVL 0 520 10 295 286 131 32 chr5 76379579 76379831 -123250319 - MLT1J1 LTR MaLR -31 415 139 391 229 30 46 chr5 76380192 76380323 -123249827 + MIR SINE MIR 23 151 -111 689 241 19 144 chr5 76380417 76380564 -123249586 + LTR16A LTR ERVL 121 198 -252 2306 93 7 7 chr5 76380564 76380866 -123249284 + AluSg SINE Alu 5 306 -4 689 241 19 144 chr5 76380866 76381079 -123249071 + LTR16A LTR ERVL 198 436 -14 329 219 12 12 chr5 76381091 76381173 -123248977 + MIR SINE MIR 175 256 -6 309 231 58 19 chr5 76383100 76383182 -123246968 + MIR SINE MIR 95 183 -79 3596 192 54 45 chr5 76383182 76384000 -123246150 - LTR1B LTR ERV1 -1 825 1 309 231 58 19 chr5 76384000 76384021 -123246129 + MIR SINE MIR 183 202 -60 345 250 60 103 chr5 76385486 76385670 -123244480 - MER5A DNA MER1_type -5 184 9 21 0 0 0 chr5 76386170 76386191 -123243959 + AT_rich Low_complexity Low_complexity 1 21 0 2128 103 0 0 chr5 76386990 76387263 -123242887 - AluSx SINE Alu -39 273 1 316 315 182 0 chr5 76387569 76387712 -123242438 + MIR SINE MIR 82 250 -12 2826 194 26 22 chr5 76388340 76388958 -123241192 + Tigger7 DNA MER2_type 8 622 -1965 1989 138 38 66 chr5 76388958 76389181 -123240969 + MER1B DNA MER1_type 1 212 -2498 2328 74 0 29 chr5 76389181 76389533 -123240617 + AluY SINE Alu 1 311 0 1989 138 38 66 chr5 76389533 76389656 -123240494 + MER1B DNA MER1_type 212 337 0 2826 194 26 22 chr5 76389656 76389738 -123240412 + Tigger7 DNA MER2_type 622 2587 0 405 336 60 3 chr5 76390127 76390325 -123239825 - MIR SINE MIR -31 231 19 413 208 42 69 chr5 76390470 76390614 -123239536 + MER5B DNA MER1_type 37 176 -2 29 28 0 0 chr5 76390751 76390787 -123239363 + AT_rich Low_complexity Low_complexity 1 36 0 * 5236 182 67 76 chr5 76390773 76392006 -123238144 + MER39-int LTR ERV1 3198 6183 -148 1069 223 135 53 chr5 76392055 76392423 -123237727 + MER39 LTR ERV1 1 579 -128 236 167 58 108 chr5 76392816 76392863 -123237287 + L1ME4a LINE L1 5785 5833 -288 1835 133 3 36 chr5 76392863 76393188 -123236962 + AluSx SINE Alu 1 312 0 236 167 58 108 chr5 76393188 76393260 -123236890 + L1ME4a LINE L1 5833 5898 -223 362 234 11 74 chr5 76393492 76393667 -123236483 + L1ME4a LINE L1 5927 6090 -31 232 209 0 0 chr5 76394107 76394150 -123236000 - MER5A DNA MER1_type 0 189 147 612 243 35 53 chr5 76394160 76394300 -123235850 - MER58 DNA MER1_type -119 222 81 2162 114 0 0 chr5 76394300 76394580 -123235570 + AluSx SINE Alu 1 280 -32 225 0 0 0 chr5 76394580 76394605 -123235545 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 612 243 35 53 chr5 76394605 76394689 -123235461 - MER58 DNA MER1_type -258 83 1 652 287 92 21 chr5 76394704 76394778 -123235372 - L1MC/D LINE L1 -526 5644 5577 2314 123 41 23 chr5 76394778 76395120 -123235030 + MER7A DNA MER2_type 1 346 0 652 287 92 21 chr5 76395120 76395757 -123234393 - L1MC/D LINE L1 -593 5577 4963 349 193 12 48 chr5 76396506 76396589 -123233561 - MER116 DNA Mariner 0 80 1 4227 184 35 39 chr5 76398018 76398835 -123231315 - MER21B LTR ERV1 -49 814 1 512 119 12 36 chr5 76398924 76399008 -123231142 - MER21B-int LTR ERV1 -52 4139 4058 395 198 176 0 chr5 76399043 76399134 -123231016 - MLT1K LTR MaLR -106 482 376 387 226 47 38 chr5 76399340 76399446 -123230704 + MIR SINE MIR 34 140 -68 193 246 16 49 chr5 76399643 76399704 -123230446 + MIR3 SINE MIR 148 206 -2 25 31 0 0 chr5 76400289 76400321 -123229829 + AT_rich Low_complexity Low_complexity 1 32 0 216 0 0 0 chr5 76401444 76401468 -123228682 + (GTTTG)n Simple_repeat Simple_repeat 1 24 0 481 149 0 14 chr5 76401468 76401532 -123228618 - AluJ/FRAM SINE Alu -30 282 218 809 153 0 0 chr5 76401554 76401678 -123228472 - FLAM_C SINE Alu -19 124 1 1879 202 5 47 chr5 76402392 76402553 -123227597 + MLT1A1 LTR MaLR 1 167 -198 2272 110 0 0 chr5 76402553 76402852 -123227298 + AluSq SINE Alu 1 299 -14 1879 202 5 47 chr5 76402852 76403071 -123227079 + MLT1A1 LTR MaLR 167 365 0 221 241 241 0 chr5 76403787 76403874 -123226276 + L2 LINE L2 3162 3269 -3 24 0 0 0 chr5 76404218 76404242 -123225908 + AT_rich Low_complexity Low_complexity 1 24 0 337 205 116 27 chr5 76408605 76408717 -123221433 + L1ME4a LINE L1 6000 6121 0 1789 133 22 60 chr5 76408784 76408951 -123221199 - AluSx SINE Alu -7 305 133 856 23 61 0 chr5 76408951 76409083 -123221067 + (TTTTA)n Simple_repeat Simple_repeat 1 140 0 2384 60 0 0 chr5 76409084 76409366 -123220784 - AluY SINE Alu -29 282 1 1789 133 22 60 chr5 76409366 76409513 -123220637 - AluSx SINE Alu -178 134 1 978 230 0 0 chr5 76410420 76410598 -123219552 - MER45A DNA AcHobo 0 178 1 242 256 26 26 chr5 76411751 76411829 -123218321 - MIR SINE MIR -6 256 179 182 346 30 10 chr5 76411846 76411947 -123218203 - MIR3 SINE MIR -94 114 12 413 277 176 11 chr5 76412375 76412563 -123217587 + MIR SINE MIR 44 262 0 2961 112 26 7 chr5 76414195 76414614 -123215536 + MSTC LTR MaLR 2 428 0 1902 198 65 28 chr5 76414614 76415048 -123215102 + LTR40b LTR ERVL 13 462 0 3557 108 14 2 chr5 76417066 76417557 -123212593 - L1PA13 LINE L1 -5 6158 5662 234 202 28 119 chr5 76419213 76419322 -123210828 + MARNA DNA Mariner 485 583 -3 351 224 0 13 chr5 76421150 76421226 -123208924 - MER5A DNA MER1_type 0 189 115 182 374 40 30 chr5 76421323 76421422 -123208728 + L2 LINE L2 3154 3253 -19 249 108 0 0 chr5 76421847 76421884 -123208266 + (TCC)n Simple_repeat Simple_repeat 3 39 0 2225 127 0 6 chr5 76422245 76422559 -123207591 - AluSx SINE Alu 0 312 1 534 263 78 29 chr5 76422651 76422856 -123207294 - MIR SINE MIR -6 256 42 367 315 50 0 chr5 76422979 76423147 -123207003 - MER20B DNA MER1_type -4 215 31 297 291 81 40 chr5 76423461 76423609 -123206541 + MIR SINE MIR 96 249 -13 374 269 123 8 chr5 76423639 76423769 -123206381 + MIR3 SINE MIR 26 170 -38 2291 110 0 3 chr5 76424162 76424461 -123205689 + AluSx SINE Alu 1 298 -14 450 271 49 15 chr5 76425179 76425347 -123204803 - MIR3 SINE MIR -19 189 15 201 147 0 0 chr5 76425635 76425669 -123204481 + (GGA)n Simple_repeat Simple_repeat 3 36 0 595 264 30 12 chr5 76425682 76425849 -123204301 - MIR SINE MIR -21 241 72 1839 121 0 81 chr5 76426233 76426576 -123203574 - AluSx SINE Alu 0 318 1 1461 200 30 10 chr5 76427824 76428124 -123202026 - AluJb SINE Alu -5 307 2 2410 113 51 20 chr5 76428274 76428627 -123201523 + THE1B LTR MaLR 1 364 0 13059 78 2 4 chr5 76428627 76430210 -123199940 + THE1B-int LTR MaLR 1 1580 0 2027 143 76 15 chr5 76430210 76430552 -123199598 + THE1B LTR MaLR 1 363 -1 375 250 73 8 chr5 76431237 76431361 -123198789 + MIR SINE MIR 61 192 -70 236 250 56 14 chr5 76431593 76431665 -123198485 + Charlie4 DNA MER1_type 1866 1940 -21 249 337 92 61 chr5 76432534 76432697 -123197453 - L2 LINE L2 -3 3269 3102 377 279 84 96 chr5 76433870 76434098 -123196052 + L2 LINE L2 2579 2803 -511 2124 131 7 0 chr5 76434098 76434396 -123195754 + AluSq SINE Alu 1 300 -13 377 279 84 96 chr5 76434396 76434500 -123195650 + L2 LINE L2 2803 2907 -407 1884 129 43 3 chr5 76434908 76435211 -123194939 + L1MA4A LINE L1 5986 6300 -3 290 323 46 39 chr5 76435400 76435530 -123194620 + L2 LINE L2 3015 3145 -127 22 0 0 0 chr5 76436412 76436434 -123193716 + AT_rich Low_complexity Low_complexity 1 22 0 16384 120 37 6 chr5 76437066 76439412 -123190738 + Tigger1 DNA MER2_type 1 2418 0 1238 181 0 14 chr5 76439450 76439671 -123190479 + AluJb SINE Alu 88 305 -7 659 316 67 43 chr5 76439678 76440439 -123189711 + L1MEd LINE L1 792 1625 -865 306 276 86 53 chr5 76441115 76441267 -123188883 - MER5A DNA MER1_type -1 188 32 540 236 103 55 chr5 76441438 76441603 -123188547 + MIR3 SINE MIR 33 205 -3 630 180 63 0 chr5 76442677 76442788 -123187362 - FLAM_A SINE Alu -19 123 6 2436 84 0 7 chr5 76442809 76443119 -123187031 - AluSq SINE Alu -5 308 1 374 326 90 17 chr5 76444214 76444392 -123185758 - L2 LINE L2 -2 3270 3080 2215 128 0 0 chr5 76444412 76444717 -123185433 - AluSx SINE Alu -7 305 1 2165 124 16 0 chr5 76445282 76445589 -123184561 - AluSx SINE Alu 0 312 1 1746 182 4 0 chr5 76447530 76447810 -123182340 + AluJb SINE Alu 12 292 -20 22 35 0 0 chr5 76448364 76448393 -123181757 + AT_rich Low_complexity Low_complexity 1 29 0 1635 111 127 12 chr5 76449693 76449973 -123180177 + AluSg SINE Alu 1 309 0 281 279 224 40 chr5 76449984 76450185 -123179965 - MIR SINE MIR -12 250 13 2347 88 0 0 chr5 76451016 76451313 -123178837 + AluY SINE Alu 1 297 -14 286 269 29 48 chr5 76451339 76451443 -123178707 + L2 LINE L2 2304 2405 -909 492 306 107 71 chr5 76451506 76451884 -123178266 + L2 LINE L2 2373 2736 -577 2191 115 0 0 chr5 76451884 76452172 -123177978 + AluSq SINE Alu 1 288 -25 492 306 107 71 chr5 76452172 76452707 -123177443 + L2 LINE L2 2736 3313 0 267 284 157 0 chr5 76454249 76454351 -123175799 - L2 LINE L2 0 3272 3155 501 305 40 7 chr5 76455389 76455540 -123174610 - MIR SINE MIR -87 175 20 213 94 0 0 chr5 76456217 76456249 -123173901 + (CAT)n Simple_repeat Simple_repeat 1 32 0 392 268 31 10 chr5 76456254 76456351 -123173799 - L2 LINE L2 -33 3239 3141 348 323 146 0 chr5 76456399 76456563 -123173587 - MIR SINE MIR -46 216 29 193 366 146 19 chr5 76456909 76457122 -123173028 + L2 LINE L2 3033 3272 0 373 269 67 0 chr5 76457235 76457339 -123172811 - MIR3 SINE MIR -9 199 89 230 217 174 61 chr5 76457971 76458028 -123172122 + L2 LINE L2 3171 3220 -93 1553 178 6 51 chr5 76458028 76458343 -123171807 - AluJo SINE Alu -11 301 1 230 217 174 61 chr5 76458343 76458400 -123171750 + L2 LINE L2 3220 3298 -15 439 333 71 8 chr5 76458434 76458689 -123171461 - MLT1J LTR MaLR 0 511 241 2905 161 12 16 chr5 76458763 76458950 -123171200 - L1MB3 LINE L1 0 6183 5997 2755 109 20 0 chr5 76458950 76459307 -123170843 - THE1B LTR MaLR 0 364 1 2905 161 12 16 chr5 76459307 76459617 -123170533 - L1MB3 LINE L1 -186 5997 5688 321 308 25 0 chr5 76460156 76460276 -123169874 + MER103 DNA DNA 43 165 -1 513 287 107 64 chr5 76460548 76461248 -123168902 - L2 LINE L2 -35 3237 2493 686 212 33 88 chr5 76462608 76462914 -123167236 + L1MC5 LINE L1 7636 7924 -37 223 255 0 0 chr5 76463702 76463749 -123166401 + GA-rich Low_complexity Low_complexity 2 48 0 200 211 0 18 chr5 76463761 76463818 -123166332 + GA-rich Low_complexity Low_complexity 2 57 0 236 295 0 0 chr5 76465166 76465227 -123164923 + (TG)n Simple_repeat Simple_repeat 1 61 0 299 240 10 0 chr5 76465241 76465345 -123164805 + (TG)n Simple_repeat Simple_repeat 2 106 0 1924 137 3 31 chr5 76466348 76466678 -123163472 + AluSx SINE Alu 1 322 0 2250 125 0 0 chr5 76466927 76467230 -123162920 + AluSq SINE Alu 1 303 -10 5447 96 34 4 chr5 76467255 76468045 -123162105 + L1PB1 LINE L1 5337 6150 -1 22 0 0 0 chr5 76468045 76468067 -123162083 + AT_rich Low_complexity Low_complexity 1 22 0 599 270 190 5 chr5 76468107 76468318 -123161832 + MIR SINE MIR 12 261 -1 2123 123 3 0 chr5 76468331 76468672 -123161478 - AluSq SINE Alu 0 342 1 233 236 327 18 chr5 76469549 76469659 -123160491 + L1ME LINE L1 5600 5743 -378 2393 97 0 0 chr5 76469909 76470207 -123159943 + AluSx SINE Alu 1 298 -14 281 334 39 34 chr5 76471234 76471393 -123158757 - MIR SINE MIR -63 145 22 11666 187 24 28 chr5 76473364 76473732 -123156418 - L1PA16 LINE L1 -1 6165 5797 249 33 0 0 chr5 76473732 76473762 -123156388 + (TA)n Simple_repeat Simple_repeat 1 30 0 11666 187 24 28 chr5 76473762 76474497 -123155653 - L1PA16 LINE L1 -369 5797 5061 2364 94 0 0 chr5 76474497 76474804 -123155346 - AluSg SINE Alu -3 307 1 11666 187 24 28 chr5 76474804 76477276 -123152874 - L1PA16 LINE L1 -1105 5061 2607 1533 196 76 47 chr5 76478319 76478801 -123151349 + MER39 LTR ERV1 1 707 0 1718 208 139 94 chr5 76478878 76479733 -123150417 - MER97a DNA MER1_type 0 894 1 2474 93 0 0 chr5 76479927 76480239 -123149911 + AluSx SINE Alu 1 312 0 2237 132 0 0 chr5 76480653 76480963 -123149187 + AluSx SINE Alu 1 310 -2 258 188 78 0 chr5 76481067 76481131 -123149019 - MIR SINE MIR -1 261 193 234 340 102 16 chr5 76481654 76481838 -123148312 + MIR3 SINE MIR 4 213 -49 1698 172 10 3 chr5 76481969 76482260 -123147890 + AluJo SINE Alu 1 293 -19 2026 171 14 17 chr5 76483015 76483360 -123146790 + MER2 DNA MER2_type 1 344 0 822 275 32 52 chr5 76483814 76484081 -123146069 + MIR SINE MIR 1 262 0 2152 105 3 0 chr5 76484926 76485211 -123144939 + AluSq SINE Alu 1 286 -27 2376 97 7 0 chr5 76486707 76487016 -123143134 - AluSq SINE Alu -2 311 1 291 242 16 0 chr5 76487031 76487093 -123143057 - L3 LINE CR1 -2 1575 1513 229 340 50 10 chr5 76487433 76487533 -123142617 + L2 LINE L2 3201 3304 -9 1877 173 0 3 chr5 76487630 76487936 -123142214 + AluJb SINE Alu 6 310 -2 508 277 81 0 chr5 76488058 76488206 -123141944 - MIR SINE MIR -1 261 102 2053 122 20 26 chr5 76488847 76489151 -123140999 - AluSx SINE Alu -10 302 1 2000 133 13 23 chr5 76489151 76489460 -123140690 - L1MC1 LINE L1 -8 6325 6020 1821 107 0 0 chr5 76490111 76490345 -123139805 + AluSq SINE Alu 1 234 -79 259 384 63 21 chr5 76490449 76490639 -123139511 - L2 LINE L2 -408 2906 2709 808 179 7 0 chr5 76490644 76490656 -123139494 - FRAM SINE Alu -138 174 164 282 29 0 0 chr5 76490656 76490691 -123139459 + (TG)n Simple_repeat Simple_repeat 2 36 0 808 179 7 0 chr5 76490691 76490829 -123139321 - FRAM SINE Alu -148 164 23 4022 84 4 8 chr5 76490829 76491354 -123138796 - MER41A LTR ERV1 0 554 32 605 188 0 0 chr5 76491354 76491450 -123138700 - AluJ/FLAM SINE Alu -215 97 2 275 353 149 25 chr5 76491450 76491892 -123138258 - L2 LINE L2 -599 2715 2219 257 131 197 0 chr5 76494000 76494061 -123136089 - MLT1J LTR MaLR 0 511 439 235 325 24 12 chr5 76494242 76494325 -123135825 - MLT1L LTR MaLR -327 288 205 22 0 0 0 chr5 76495095 76495117 -123135033 + AT_rich Low_complexity Low_complexity 1 22 0 185 167 0 28 chr5 76495953 76495989 -123134161 - MIR SINE MIR -6 256 222 * 296 287 82 41 chr5 76495960 76496082 -123134068 - L2 LINE L2 -37 3235 3109 3551 74 45 21 chr5 76496489 76496613 -123133537 - MER41A LTR ERV1 0 635 515 2096 110 0 4 chr5 76496613 76496894 -123133256 + AluSx SINE Alu 1 280 -32 3551 74 45 21 chr5 76496894 76497381 -123132769 - MER41A LTR ERV1 -120 515 1 403 266 31 16 chr5 76497415 76497543 -123132607 + Charlie2 DNA MER1_type 6 135 -2727 865 217 92 12 chr5 76497739 76497988 -123132162 + Charlie2a DNA MER1_type 744 1012 -1850 512 217 9 0 chr5 76497992 76498098 -123132052 + Charlie2a DNA MER1_type 2750 2856 -6 282 246 187 15 chr5 76498170 76498304 -123131846 + MER103 DNA DNA 3 159 -7 2069 111 7 3 chr5 76498528 76498825 -123131325 - AluSx SINE Alu -14 298 1 2010 127 10 3 chr5 76498835 76499135 -123131015 - AluSg SINE Alu -8 302 1 430 297 62 0 chr5 76500033 76500161 -123129989 + L2 LINE L2 3137 3272 0 186 43 0 0 chr5 76500893 76500916 -123129234 + (TA)n Simple_repeat Simple_repeat 2 24 0 815 191 0 7 chr5 76501354 76501490 -123128660 + AluJo SINE Alu 2 136 -176 2493 70 0 13 chr5 76501518 76501833 -123128317 + AluY SINE Alu 1 311 0 351 0 0 0 chr5 76502718 76502757 -123127393 + (TG)n Simple_repeat Simple_repeat 2 40 0 980 190 0 0 chr5 76502958 76503116 -123127034 - AluJb SINE Alu -154 158 1 304 230 108 0 chr5 76503116 76503190 -123126960 + MER63A DNA MER1_type 103 184 -26 1667 148 0 58 chr5 76503352 76503662 -123126488 - AluJo SINE Alu -20 292 1 540 312 33 73 chr5 76504619 76504775 -123125375 - L2 LINE L2 0 3272 3134 993 186 0 0 chr5 76504775 76504936 -123125214 + FRAM SINE Alu 1 161 -5 540 312 33 73 chr5 76504936 76505109 -123125041 - L2 LINE L2 -138 3134 2956 2375 158 18 0 chr5 76505700 76506093 -123124057 + L1 LINE L1 3884 4283 -1863 612 302 83 34 chr5 76506293 76506465 -123123685 - L1ME4a LINE L1 -239 5882 5720 2041 151 3 6 chr5 76506465 76506777 -123123373 - AluSx SINE Alu -1 311 1 612 302 83 34 chr5 76506777 76506955 -123123195 - L1ME4a LINE L1 -401 5720 5515 6224 169 28 33 chr5 76507074 76509472 -123120678 + L1MA6 LINE L1 3636 5965 -335 2139 104 17 0 chr5 76509472 76509760 -123120390 + AluSx SINE Alu 1 293 -19 6224 169 28 33 chr5 76509760 76510095 -123120055 + L1MA6 LINE L1 5965 6300 0 2086 143 0 6 chr5 76510098 76510412 -123119738 + AluSq SINE Alu 1 312 -1 2134 141 0 0 chr5 76510574 76510878 -123119272 + AluSq SINE Alu 1 304 -9 218 301 19 10 chr5 76511104 76511125 -123119025 + (TA)n Simple_repeat Simple_repeat 1 20 -84 1961 154 97 6 chr5 76511125 76511444 -123118706 + MER7A DNA MER2_type 1 346 0 218 301 19 10 chr5 76511444 76511525 -123118625 + (TA)n Simple_repeat Simple_repeat 20 104 0 225 184 0 41 chr5 76511529 76511578 -123118572 + L1MC4 LINE L1 6656 6702 -1340 189 0 0 0 chr5 76511787 76511808 -123118342 + (A)n Simple_repeat Simple_repeat 1 21 0 2310 104 3 7 chr5 76511818 76512127 -123118023 + AluSq SINE Alu 1 308 -5 282 280 160 10 chr5 76512141 76512241 -123117909 + MARNA DNA Mariner 88 202 -384 2050 121 3 0 chr5 76512431 76512755 -123117395 - AluSp SINE Alu 0 325 1 823 268 27 121 chr5 76513088 76513183 -123116967 - MER34 LTR ERV1 -35 507 405 672 206 48 8 chr5 76513183 76513309 -123116841 - FLAM_A SINE Alu -2 131 1 823 268 27 121 chr5 76513309 76513773 -123116377 - MER34 LTR ERV1 -137 405 1 1095 198 122 30 chr5 76515307 76515635 -123114515 + MER20B DNA MER1_type 29 386 -397 273 182 208 0 chr5 76515839 76515916 -123114234 + MER20B DNA MER1_type 543 635 -148 877 197 106 77 chr5 76515945 76516295 -123113855 + LTR16A LTR ERVL 28 387 -63 381 229 86 21 chr5 76516338 76516478 -123113672 + MER20B DNA MER1_type 635 783 0 2027 79 76 7 chr5 76516906 76517183 -123112967 - AluSp SINE Alu -17 296 1 247 152 15 15 chr5 76517306 76517372 -123112778 + (TG)n Simple_repeat Simple_repeat 1 66 0 1845 163 7 0 chr5 76518530 76518818 -123111332 + AluJo SINE Alu 1 290 -22 282 73 0 0 chr5 76519893 76519934 -123110216 + (CA)n Simple_repeat Simple_repeat 1 41 0 332 263 12 117 chr5 76520075 76520190 -123109960 + MER5B DNA MER1_type 22 115 -63 1549 124 12 108 chr5 76520190 76520513 -123109637 - AluSx SINE Alu -20 292 1 332 263 12 117 chr5 76520513 76520568 -123109582 + MER5B DNA MER1_type 115 174 -4 3505 126 62 67 chr5 76521881 76522498 -123107652 - LTR18B LTR ERVL 0 614 1 464 261 25 25 chr5 76523653 76523810 -123106340 - LTR16B LTR ERVL -4 460 304 1824 137 16 38 chr5 76523841 76523978 -123106172 + AluJb SINE Alu 3 142 -170 234 0 0 0 chr5 76523978 76524004 -123106146 + (CA)n Simple_repeat Simple_repeat 1 26 0 1824 137 16 38 chr5 76524004 76524179 -123105971 + AluJb SINE Alu 142 308 -4 475 148 148 71 chr5 76525644 76525826 -123104324 - MER21B LTR ERV1 -35 828 633 4031 158 84 12 chr5 76525839 76526588 -123103562 - LTR1B LTR ERV1 -23 803 1 2690 200 112 35 chr5 76526588 76527223 -123102927 - MER21B LTR ERV1 -179 684 1 1918 147 26 37 chr5 76527383 76527731 -123102419 - L1MC1 LINE L1 -7 6326 5983 192 40 0 0 chr5 76528246 76528271 -123101879 + (GA)n Simple_repeat Simple_repeat 2 26 0 2966 171 16 32 chr5 76529240 76529803 -123100347 - MER89 LTR ERV1 0 559 6 574 240 26 19 chr5 76530191 76530345 -123099805 + MIR SINE MIR 89 243 -19 292 311 43 18 chr5 76530382 76530546 -123099604 - MIR SINE MIR 0 262 95 237 221 151 47 chr5 76530548 76530634 -123099516 + MIR SINE MIR 156 250 -12 1856 146 11 97 chr5 76530676 76530909 -123099241 + MER1B DNA MER1_type 1 192 -2520 1072 79 286 0 chr5 76530909 76531087 -123099063 + MER30 DNA MER1_type 2 230 0 1856 146 11 97 chr5 76531087 76531224 -123098926 + MER1B DNA MER1_type 192 339 0 361 280 31 108 chr5 76531273 76531598 -123098552 + MLT1J LTR MaLR 23 322 -189 21 0 0 0 chr5 76535504 76535525 -123094625 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 76536602 76536624 -123093526 + (CAA)n Simple_repeat Simple_repeat 3 24 0 208 313 25 12 chr5 76537405 76537485 -123092665 - MIR3 SINE MIR -20 188 108 2125 122 10 0 chr5 76537992 76538286 -123091864 + AluSx SINE Alu 1 297 -15 573 270 40 40 chr5 76539178 76539404 -123090746 + MIR SINE MIR 31 256 -6 583 210 85 74 chr5 76539422 76539552 -123090598 + MER5B DNA MER1_type 1 135 -43 2362 80 3 0 chr5 76539552 76539865 -123090285 + AluY SINE Alu 1 311 0 583 210 85 74 chr5 76539865 76539910 -123090240 + MER5B DNA MER1_type 135 178 0 24 0 0 0 chr5 76541920 76541944 -123088206 + AT_rich Low_complexity Low_complexity 1 24 0 1339 146 102 4 chr5 76542550 76542776 -123087374 - AluJo SINE Alu -26 286 39 342 0 0 0 chr5 76543176 76543214 -123086936 + (TG)n Simple_repeat Simple_repeat 2 39 0 251 93 23 0 chr5 76546263 76546306 -123083844 + (GGA)n Simple_repeat Simple_repeat 3 46 0 286 211 13 26 chr5 76547258 76547334 -123082816 - MIR3 SINE MIR -53 155 81 434 258 33 0 chr5 76550336 76550456 -123079694 + MIR SINE MIR 59 182 -80 241 235 141 12 chr5 76551284 76551369 -123078781 - L2 LINE L2 0 3272 3177 * 382 242 39 45 chr5 76551342 76551514 -123078636 + MIR SINE MIR 5 171 -62 2444 72 0 16 chr5 76551703 76552010 -123078140 - AluY SINE Alu -9 302 1 190 220 20 0 chr5 76553181 76553231 -123076919 + MIR SINE MIR 168 218 -44 373 255 38 34 chr5 76554476 76554631 -123075519 - MIR SINE MIR -62 146 34 2413 84 0 3 chr5 76555783 76556082 -123074068 + AluSg SINE Alu 2 299 -11 714 245 63 17 chr5 76556438 76556675 -123073475 - MIR SINE MIR -1 261 14 241 254 0 0 chr5 76557198 76557269 -123072881 + L1M4 LINE L1 4303 4373 -1773 752 203 18 0 chr5 76557283 76557446 -123072704 + FAM SINE Alu 1 166 -9 2343 119 0 0 chr5 76557577 76557889 -123072261 + AluSx SINE Alu 1 312 0 225 268 103 10 chr5 76558595 76558692 -123071458 - L2 LINE L2 -558 2756 2651 1809 137 9 71 chr5 76559201 76559523 -123070627 - AluSx SINE Alu -10 302 1 288 330 20 0 chr5 76559701 76559810 -123070340 - MIR SINE MIR -68 140 41 1996 104 0 75 chr5 76560062 76560433 -123069717 + AluSx SINE Alu 1 348 0 2166 110 0 23 chr5 76560501 76560800 -123069350 - AluSx SINE Alu -20 292 1 958 266 80 14 chr5 76561134 76561499 -123068651 + L2 LINE L2 2863 3251 -62 1004 259 97 66 chr5 76562338 76562798 -123067352 + MER77 LTR ERV1 144 597 -8 188 351 26 13 chr5 76563120 76563197 -123066953 - MIR SINE MIR -102 106 29 582 264 53 95 chr5 76564117 76564401 -123065749 + MLT1L LTR MaLR 121 392 -223 300 27 0 0 chr5 76564900 76564937 -123065213 + (GA)n Simple_repeat Simple_repeat 1 37 0 22 0 0 0 chr5 76565305 76565327 -123064823 + AT_rich Low_complexity Low_complexity 1 22 0 459 0 0 0 chr5 76565402 76565453 -123064697 + (TG)n Simple_repeat Simple_repeat 2 52 0 195 42 0 0 chr5 76565452 76565476 -123064674 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 543 188 0 10 chr5 76565477 76565573 -123064577 - FLAM_C SINE Alu -36 107 13 231 229 242 19 chr5 76565956 76566113 -123064037 - L1ME4a LINE L1 -2 6119 5928 266 244 49 12 chr5 76566122 76566204 -123063946 - L1ME4a LINE L1 -238 5883 5799 418 312 111 38 chr5 76566362 76566705 -123063445 - L1ME4a LINE L1 -407 5714 5347 280 297 10 20 chr5 76566731 76566832 -123063318 - MIR SINE MIR -117 145 46 2212 104 0 0 chr5 76567098 76567378 -123062772 - AluSq SINE Alu -32 281 2 1818 165 3 32 chr5 76567732 76567862 -123062288 + AluJo SINE Alu 1 133 -179 2214 115 0 0 chr5 76567862 76568158 -123061992 + AluSq SINE Alu 1 296 -17 1818 165 3 32 chr5 76568158 76568342 -123061808 + AluJo SINE Alu 133 306 -6 371 261 165 48 chr5 76568843 76569176 -123060974 + L1ME4a LINE L1 5575 5946 -175 207 0 0 0 chr5 76569303 76569326 -123060824 + (TG)n Simple_repeat Simple_repeat 2 24 0 2176 98 10 17 chr5 76571021 76571317 -123058833 + AluSp SINE Alu 1 294 -19 264 30 0 0 chr5 76572082 76572115 -123058035 + (TG)n Simple_repeat Simple_repeat 1 66 0 264 30 0 0 chr5 76572115 76572148 -123058002 + (TG)n Simple_repeat Simple_repeat 2 34 0 278 313 202 5 chr5 76572338 76572546 -123057604 + MIR SINE MIR 14 262 0 1361 157 45 5 chr5 76572841 76573064 -123057086 - AluSq SINE Alu -4 309 78 260 304 90 19 chr5 76573284 76573550 -123056600 - L1ME4a LINE L1 -1099 5047 4763 3796 203 72 65 chr5 76573855 76574961 -123055189 + LTR28 LTR ERV1 1 636 0 1424 190 63 77 chr5 76575153 76575596 -123054554 + L1ME1 LINE L1 5726 6162 -4 230 362 11 21 chr5 76575627 76575721 -123054429 - MER5B DNA MER1_type -81 97 5 301 305 50 50 chr5 76577466 76577666 -123052484 + LTR67 LTR ERVL 97 296 -261 336 281 21 0 chr5 76577732 76577828 -123052322 + LTR67 LTR ERVL 431 528 -29 980 224 96 86 chr5 76577828 76578210 -123051940 - LTR24B LTR ERV1 0 635 195 2486 80 0 3 chr5 76578210 76578522 -123051628 + AluY SINE Alu 1 311 0 980 224 96 86 chr5 76578522 76578719 -123051431 - LTR24B LTR ERV1 -440 195 1 2037 146 81 65 chr5 76578869 76579328 -123050822 - MER31B LTR ERV1 0 466 1 532 313 44 50 chr5 76579422 76579719 -123050431 - L2 LINE L2 -383 2931 2637 252 296 0 0 chr5 76579931 76580002 -123050148 + L1ME LINE L1 4531 4601 -1545 771 101 0 9 chr5 76580088 76580197 -123049953 - LTR23 LTR ERV1 -31 406 299 684 118 0 146 chr5 76580202 76580346 -123049804 - FLAM_C SINE Alu -16 127 5 1874 137 18 0 chr5 76580374 76580659 -123049491 + AluSx SINE Alu 1 290 -22 1282 118 77 98 chr5 76580681 76580766 -123049384 - LTR23 LTR ERV1 -155 282 197 2173 87 18 0 chr5 76580766 76581068 -123049082 - AluY SINE Alu 0 308 2 1282 118 77 98 chr5 76581068 76581268 -123048882 - LTR23 LTR ERV1 -240 197 2 264 122 0 0 chr5 76581361 76581402 -123048748 + (T)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr5 76581578 76581600 -123048550 + AT_rich Low_complexity Low_complexity 1 22 0 1040 169 32 0 chr5 76581602 76581791 -123048359 - L1PB3 LINE L1 -4 6150 5956 2318 81 0 3 chr5 76581903 76582230 -123047920 + AluSq SINE Alu 1 326 0 548 309 96 26 chr5 76582268 76582760 -123047390 + L1ME LINE L1 4789 5314 -832 246 159 0 0 chr5 76582803 76582847 -123047303 + L1ME LINE L1 5389 5432 -689 232 125 50 0 chr5 76582969 76583009 -123047141 + MLT1F1 LTR MaLR 523 564 -3 431 310 19 6 chr5 76583026 76583184 -123046966 + MLT1F1-int LTR MaLR 6 165 -1206 299 294 38 19 chr5 76583200 76583360 -123046790 + MLT1F1-int LTR MaLR 309 471 -900 2323 108 7 0 chr5 76583407 76583714 -123046436 + AluSx SINE Alu 1 309 -3 791 262 158 87 chr5 76583913 76584508 -123045642 + MLT1F1-int LTR MaLR 730 1366 -5 402 96 0 0 chr5 76584509 76584561 -123045589 + MLT1F1 LTR MaLR 36 87 -480 286 287 35 49 chr5 76584897 76585040 -123045110 + MIR SINE MIR 52 192 -70 986 171 10 52 chr5 76585121 76585314 -123044836 + MER20 DNA MER1_type 35 219 0 576 238 41 0 chr5 76585332 76585454 -123044696 + FLAM_A SINE Alu 1 127 -6 1708 193 108 54 chr5 76585727 76585965 -123044185 + MLT1F1 LTR MaLR 97 321 -246 2572 61 0 0 chr5 76585965 76586276 -123043874 + AluY SINE Alu 1 311 0 1708 193 108 54 chr5 76586276 76586482 -123043668 + MLT1F1 LTR MaLR 321 565 -2 3986 143 55 35 chr5 76586692 76587184 -123042966 - MER39 LTR ERV1 0 707 195 2298 115 0 0 chr5 76587184 76587488 -123042662 - AluSx SINE Alu -4 308 5 3986 143 55 35 chr5 76587488 76587688 -123042462 - MER39 LTR ERV1 -512 195 1 2215 116 7 0 chr5 76587697 76588007 -123042143 - AluSq SINE Alu -1 312 1 2488 71 3 0 chr5 76588554 76588865 -123041285 - AluSx SINE Alu 0 312 1 343 256 157 80 chr5 76588928 76589341 -123040809 - L1M2 LINE L1 -5489 1360 561 267 363 0 0 chr5 76591295 76591386 -123038764 + L2 LINE L2 3198 3288 -25 397 165 0 13 chr5 76591579 76591658 -123038492 - L1MB2 LINE L1 -3 6168 6091 28 29 0 0 chr5 76592118 76592153 -123037997 + AT_rich Low_complexity Low_complexity 1 35 0 2114 95 0 42 chr5 76592228 76592534 -123037616 - AluSg SINE Alu -17 293 1 667 296 30 5 chr5 76592593 76592792 -123037358 - MLT1L LTR MaLR 0 615 412 514 211 114 66 chr5 76592933 76593099 -123037051 - MER5B DNA MER1_type -3 175 2 531 242 75 97 chr5 76593507 76593908 -123036242 - L1ME4a LINE L1 -7 6114 5723 2218 115 6 6 chr5 76594259 76594591 -123035559 + AluSx SINE Alu 1 332 0 22 0 0 0 chr5 76595178 76595200 -123034950 + AT_rich Low_complexity Low_complexity 1 22 0 318 288 34 42 chr5 76595237 76595473 -123034677 + L1MC4a LINE L1 5674 5907 -1901 1426 138 119 60 chr5 76596107 76596375 -123033775 + AluJb SINE Alu 1 284 -28 383 298 16 78 chr5 76597195 76597453 -123032697 - L2 LINE L2 -835 2479 2238 1837 163 0 10 chr5 76597772 76598072 -123032078 + AluJb SINE Alu 7 303 -9 2036 120 0 17 chr5 76598589 76598880 -123031270 + AluSx SINE Alu 16 301 -11 2326 69 3 7 chr5 76599093 76599383 -123030767 - AluY SINE Alu -10 301 13 2169 100 0 4 chr5 76599809 76600089 -123030061 + AluSg SINE Alu 12 290 -20 3222 107 38 8 chr5 76600139 76600635 -123029515 - MER9 LTR ERVK 0 511 1 1290 173 14 39 chr5 76601164 76601447 -123028703 + AluJb SINE Alu 21 296 -16 2012 123 0 10 chr5 76602112 76602405 -123027745 + AluSx SINE Alu 1 290 -22 22 0 0 0 chr5 76602416 76602438 -123027712 + AT_rich Low_complexity Low_complexity 1 22 0 2511 65 3 0 chr5 76602729 76603039 -123027111 + AluSx SINE Alu 2 312 0 2170 120 7 0 chr5 76603586 76603895 -123026255 + AluSq SINE Alu 1 311 -2 3986 143 55 35 chr5 76603904 76604104 -123026046 + MER39 LTR ERV1 1 195 -512 2276 118 0 0 chr5 76604104 76604408 -123025742 + AluSx SINE Alu 5 308 -4 3986 143 55 35 chr5 76604408 76604900 -123025250 + MER39 LTR ERV1 195 707 0 1612 200 86 79 chr5 76605110 76605338 -123024812 - MLT1F1 LTR MaLR -2 565 340 2374 53 7 0 chr5 76605338 76605623 -123024527 - AluY SINE Alu -24 287 1 1612 200 86 79 chr5 76605623 76605860 -123024290 - MLT1F1 LTR MaLR -227 340 97 627 238 41 0 chr5 76606133 76606255 -123023895 - FLAM_A SINE Alu -6 127 1 983 171 10 52 chr5 76606273 76606466 -123023684 - MER20 DNA MER1_type 0 219 35 318 313 85 35 chr5 76606489 76606690 -123023460 - MIR SINE MIR 0 262 52 400 96 0 0 chr5 76607026 76607078 -123023072 - MLT1F1 LTR MaLR -480 87 36 924 244 170 99 chr5 76607079 76607674 -123022476 - MLT1F1-int LTR MaLR -5 1366 730 2328 107 7 0 chr5 76607881 76608191 -123021959 - AluSx SINE Alu 0 312 1 304 294 38 19 chr5 76608238 76608398 -123021752 - MLT1F1-int LTR MaLR -900 471 309 432 310 19 6 chr5 76608414 76608572 -123021578 - MLT1F1-int LTR MaLR -1206 165 6 236 125 50 0 chr5 76608589 76608629 -123021521 - MLT1F1 LTR MaLR -3 564 523 252 159 0 0 chr5 76608751 76608795 -123021355 - L1ME LINE L1 -689 5432 5389 632 296 81 58 chr5 76608838 76609368 -123020782 - L1ME LINE L1 -832 5314 4798 2295 81 0 3 chr5 76609368 76609691 -123020459 - AluSq SINE Alu 0 322 1 632 296 81 58 chr5 76609691 76609803 -123020347 - L1ME LINE L1 -1348 4798 4653 1104 169 32 0 chr5 76609803 76609992 -123020158 + L1PB3 LINE L1 5956 6150 -4 264 122 0 0 chr5 76610192 76610233 -123019917 + (A)n Simple_repeat Simple_repeat 1 41 0 1293 118 77 98 chr5 76610326 76610526 -123019624 + LTR23 LTR ERV1 2 197 -240 2137 91 18 0 chr5 76610526 76610828 -123019322 + AluY SINE Alu 2 308 0 1293 118 77 98 chr5 76610828 76610913 -123019237 + LTR23 LTR ERV1 197 282 -155 1841 140 18 0 chr5 76610935 76611220 -123018930 - AluSx SINE Alu -22 290 1 696 132 0 146 chr5 76611248 76611392 -123018758 + FLAM_C SINE Alu 5 127 -16 573 123 5 0 chr5 76611392 76611489 -123018661 + LTR56 LTR ERV1 299 404 -41 2271 100 0 0 chr5 76611892 76612182 -123017968 + AluSx SINE Alu 16 305 -7 2361 76 10 17 chr5 76613764 76614065 -123016085 + AluSx SINE Alu 3 301 -11 25 0 0 0 chr5 76614372 76614397 -123015753 + AT_rich Low_complexity Low_complexity 1 25 0 2308 85 14 0 chr5 76614397 76614692 -123015458 - AluSp SINE Alu -14 299 1 2281 103 0 0 chr5 76614696 76615008 -123015142 - AluSc SINE Alu 0 312 1 2078 119 7 3 chr5 76615225 76615519 -123014631 + AluSx SINE Alu 5 299 -13 2196 124 0 3 chr5 76615594 76615893 -123014257 - AluSx SINE Alu -14 298 1 494 249 126 65 chr5 76615913 76616299 -123013851 - L1MC/D LINE L1 -332 5789 5354 2204 122 7 3 chr5 76616321 76616625 -123013525 - AluSx SINE Alu -7 305 1 47 0 0 0 chr5 76616753 76616800 -123013350 + AT_rich Low_complexity Low_complexity 1 47 0 674 182 91 0 chr5 76616800 76616910 -123013240 - AluJb SINE Alu -188 124 5 2149 121 0 0 chr5 76617020 76617324 -123012826 - AluSq SINE Alu 0 305 2 25 0 0 0 chr5 76617324 76617349 -123012801 + AT_rich Low_complexity Low_complexity 1 25 0 893 165 0 8 chr5 76617368 76617501 -123012649 - FLAM_C SINE Alu -1 132 1 5337 197 94 45 chr5 76617946 76618385 -123011765 - L1MC4 LINE L1 0 8042 7626 2674 16 13 0 chr5 76618385 76618688 -123011462 - AluYa5 SINE Alu -4 307 1 5337 197 94 45 chr5 76618688 76619261 -123010889 - L1MC4 LINE L1 -416 7626 7082 2256 113 0 0 chr5 76619261 76619563 -123010587 - AluSq SINE Alu -11 302 1 5337 197 94 45 chr5 76619563 76619931 -123010219 - L1MC4 LINE L1 -960 7082 6578 860 211 66 83 chr5 76619931 76620001 -123010149 + MER58A DNA MER1_type 1 71 -2349 1466 184 0 45 chr5 76620001 76620289 -123009861 - AluJb SINE Alu -37 275 1 860 211 66 83 chr5 76620289 76620446 -123009704 + MER58A DNA MER1_type 71 224 0 5337 197 94 45 chr5 76620446 76620590 -123009560 - L1MC4 LINE L1 -1464 6578 6442 27 73 0 0 chr5 76620675 76620730 -123009420 + AT_rich Low_complexity Low_complexity 1 55 0 2139 133 0 0 chr5 76621120 76621422 -123008728 + AluJb SINE Alu 1 302 -10 333 389 14 0 chr5 76622097 76622236 -123007914 - MIR3 SINE MIR -10 198 58 352 217 78 60 chr5 76622335 76622501 -123007649 - L1MC5 LINE L1 -32 7929 7761 45178 33 5 0 chr5 76622615 76628742 -123001408 + L1PA3 LINE L1 1 6155 0 21 0 0 0 chr5 76628750 76628771 -123001379 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 76628797 76628820 -123001330 + AT_rich Low_complexity Low_complexity 1 23 0 959 174 101 16 chr5 76628822 76629069 -123001081 - L1MC5 LINE L1 -389 7572 7305 192 77 0 0 chr5 76629945 76629971 -123000179 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1188 123 0 0 chr5 76629974 76630129 -123000021 - AluSg/x SINE Alu -24 288 134 2228 99 16 0 chr5 76630129 76630433 -122999717 - AluY SINE Alu -2 309 1 890 230 84 0 chr5 76630849 76631075 -122999075 + MIR SINE MIR 2 246 -16 222 200 0 0 chr5 76631170 76631210 -122998940 - L2 LINE L2 -559 2755 2716 225 317 188 50 chr5 76631240 76631581 -122998569 - L2 LINE L2 -706 2608 2221 2446 94 0 0 chr5 76632033 76632340 -122997810 + AluSx SINE Alu 1 307 -5 1898 113 34 0 chr5 76633206 76633472 -122996678 + AluSx SINE Alu 1 275 -37 231 61 0 0 chr5 76633475 76633508 -122996642 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 1012 185 19 51 chr5 76633617 76633833 -122996317 - MER3 DNA MER1_type 0 209 1 663 153 120 134 chr5 76633839 76634055 -122996095 - MER58C DNA MER1_type -1 214 2 234 238 32 32 chr5 76634351 76634414 -122995736 - L2 LINE L2 0 3313 3251 247 108 0 0 chr5 76635281 76635318 -122994832 + HY5 scRNA scRNA 1 37 -47 2332 95 0 0 chr5 76635960 76636254 -122993896 + AluSg1 SINE Alu 1 294 -15 839 129 0 50 chr5 76640647 76640787 -122989363 + FLAM_C SINE Alu 1 133 0 775 85 9 0 chr5 76641397 76641503 -122988647 - U6 snRNA snRNA 0 107 1 22 0 0 0 chr5 76642756 76642778 -122987372 + AT_rich Low_complexity Low_complexity 1 22 0 236 200 31 15 chr5 76643174 76643180 -122986970 + (TA)n Simple_repeat Simple_repeat 1 5 -61 1709 179 0 21 chr5 76643180 76643470 -122986680 + AluJo SINE Alu 1 284 -28 236 200 31 15 chr5 76643470 76643528 -122986622 + (TA)n Simple_repeat Simple_repeat 5 66 0 637 234 139 33 chr5 76643789 76644033 -122986117 - L1MC4 LINE L1 -897 7145 6876 1418 150 156 29 chr5 76644053 76644393 -122985757 - L1MA7 LINE L1 0 6291 5909 1976 171 62 29 chr5 76644439 76644855 -122985295 - Tigger2a DNA MER2_type -4 430 1 640 291 102 57 chr5 76644891 76645043 -122985107 - L1MEd LINE L1 -5296 823 679 2164 124 10 0 chr5 76645043 76645350 -122984800 - AluSg SINE Alu 0 310 1 640 291 102 57 chr5 76645350 76645657 -122984493 - L1MEd LINE L1 -5440 679 343 236 204 114 34 chr5 76645740 76645828 -122984322 - L1MEd LINE L1 -5960 159 65 201 152 0 0 chr5 76646498 76646531 -122983619 + GA-rich Low_complexity Low_complexity 2 34 0 231 314 0 0 chr5 76647018 76647088 -122983062 + MLT1J LTR MaLR 150 219 -292 2251 88 3 0 chr5 76647098 76647411 -122982739 - AluSp SINE Alu 0 314 1 227 326 82 0 chr5 76647539 76647637 -122982513 + MLT1J LTR MaLR 355 460 -51 655 237 233 38 chr5 76647655 76647921 -122982229 + MER77 LTR ERV1 214 531 -74 1577 152 45 59 chr5 76648244 76648534 -122981616 - AluJb SINE Alu -3 309 24 468 0 0 0 chr5 76649226 76649278 -122980872 + (CA)n Simple_repeat Simple_repeat 2 53 0 633 302 134 49 chr5 76649450 76649507 -122980643 - L2 LINE L2 -113 3200 3149 911 143 0 0 chr5 76649507 76649640 -122980510 + FLAM_C SINE Alu 1 133 0 633 302 134 49 chr5 76649640 76650064 -122980086 - L2 LINE L2 -164 3149 2680 927 162 128 44 chr5 76650415 76650711 -122979439 + MER33 DNA MER1_type 4 324 0 365 322 191 0 chr5 76650727 76650879 -122979271 + MER5A DNA MER1_type 8 188 -1 25 0 0 0 chr5 76650977 76651002 -122979148 + AT_rich Low_complexity Low_complexity 1 25 0 184 363 53 42 chr5 76651848 76652038 -122978112 - L2 LINE L2 -212 3060 2869 780 243 199 29 chr5 76652192 76652533 -122977617 + MLT1J LTR MaLR 100 498 -13 450 214 48 10 chr5 76654112 76654215 -122975935 - L2 LINE L2 -4 3309 3203 238 255 49 20 chr5 76654377 76654479 -122975671 - L1ME3A LINE L1 -223 5947 5843 * 254 187 111 14 chr5 76654471 76654559 -122975591 - L1P3 LINE L1 -375 5787 5703 184 269 39 0 chr5 76655575 76655627 -122974523 - L2 LINE L2 -9 3304 3251 * 495 204 355 0 chr5 76655593 76655765 -122974385 - MIR SINE MIR -21 241 9 532 255 171 25 chr5 76656501 76656740 -122973410 + L2 LINE L2 3040 3313 0 529 271 173 13 chr5 76658628 76658853 -122971297 + MIR SINE MIR 2 262 0 959 177 29 49 chr5 76658923 76658973 -122971177 - L1MB2 LINE L1 -2 6169 6119 2286 95 0 7 chr5 76658973 76659268 -122970882 - AluSg SINE Alu -17 293 1 959 177 29 49 chr5 76659268 76659460 -122970690 - L1MB2 LINE L1 -52 6119 5932 * 1722 159 42 7 chr5 76659458 76659806 -122970344 - L1P5 LINE L1 -396 5760 5404 786 227 148 9 chr5 76660052 76660268 -122969882 + MIR SINE MIR 2 247 -15 1885 163 51 3 chr5 76660327 76660658 -122969492 - MER7A DNA MER2_type 0 346 2 807 265 71 9 chr5 76660984 76661320 -122968830 + L1ME3A LINE L1 5595 5951 -219 1987 131 3 22 chr5 76661361 76661673 -122968477 + AluSx SINE Alu 1 306 -6 1199 158 0 0 chr5 76661739 76661923 -122968227 - MER2 DNA MER2_type -160 185 2 191 331 121 32 chr5 76664390 76664514 -122965636 + MIR3 SINE MIR 32 166 -42 855 214 211 3 chr5 76664574 76664859 -122965291 - L1ME2 LINE L1 -10 6154 5811 2167 98 0 4 chr5 76664893 76665271 -122964879 + AluSx SINE Alu 7 383 0 1335 181 72 60 chr5 76665271 76665324 -122964826 - L1ME2 LINE L1 -574 5590 5539 1923 128 7 30 chr5 76665324 76665621 -122964529 - AluJb SINE Alu -22 290 1 1335 181 72 60 chr5 76665621 76665935 -122964215 - L1ME2 LINE L1 -625 5539 5222 385 200 19 9 chr5 76665926 76666031 -122964119 - L1MC4 LINE L1 -195 7847 7742 * 489 249 147 20 chr5 76666033 76666278 -122963872 - L1ME2 LINE L1 -913 5233 4958 607 143 0 0 chr5 76666588 76666679 -122963471 + LTR40a LTR ERVL 429 519 0 2518 160 32 71 chr5 76667009 76667597 -122962553 + L1MB2 LINE L1 5604 6168 -3 438 276 189 20 chr5 76668146 76668342 -122961808 + MIR SINE MIR 7 235 -27 180 200 0 0 chr5 76668687 76668727 -122961423 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 9009 115 50 15 chr5 76669113 76669621 -122960529 + L1PB1 LINE L1 1516 2005 -4857 2109 142 3 0 chr5 76669621 76669916 -122960234 + AluSx SINE Alu 1 296 -16 9009 115 50 15 chr5 76669916 76671139 -122959011 + L1PB1 LINE L1 2005 3327 -3535 1850 123 75 0 chr5 76671139 76671407 -122958743 + AluSx SINE Alu 1 288 -24 9009 115 50 15 chr5 76671407 76671734 -122958416 + L1PB1 LINE L1 3327 3641 -3221 3721 199 28 2 chr5 76671736 76672562 -122957588 + L1 LINE L1 3190 4036 -2110 609 107 91 0 chr5 76672594 76672707 -122957443 + L1PB1 LINE L1 6107 6229 -638 1805 71 43 0 chr5 76672712 76672966 -122957184 - L1P5 LINE L1 -363 5788 5524 2489 70 21 67 chr5 76672990 76673376 -122956774 + L1PB1 LINE L1 6499 6866 -1 21 0 0 0 chr5 76673449 76673470 -122956680 + AT_rich Low_complexity Low_complexity 1 21 0 2072 111 31 57 chr5 76673782 76673815 -122956335 + L1MB2 LINE L1 5794 5826 -345 1674 121 12 8 chr5 76673815 76674063 -122956087 + AluJo SINE Alu 61 309 -3 2072 111 31 57 chr5 76674063 76674415 -122955735 + L1MB2 LINE L1 5826 6169 -2 646 231 50 6 chr5 76677528 76677688 -122952462 + MER5A DNA MER1_type 21 187 -2 264 264 164 21 chr5 76677840 76677980 -122952170 - MER5B DNA MER1_type -18 160 1 4553 160 14 1 chr5 76678554 76679278 -122950872 - MER44D DNA MER2_type 0 605 1 1401 101 73 18 chr5 76680698 76680916 -122949234 - MER30 DNA MER1_type 0 230 1 2305 111 0 0 chr5 76681084 76681391 -122948759 - AluSx SINE Alu -5 307 1 761 285 90 28 chr5 76681554 76681908 -122948242 - L2 LINE L2 -3 3310 2935 2192 103 0 7 chr5 76682020 76682320 -122947830 + AluSq SINE Alu 1 298 -15 1903 125 6 22 chr5 76682329 76682642 -122947508 + AluJb SINE Alu 1 308 -4 357 246 145 22 chr5 76684016 76684154 -122945996 - MIR3 SINE MIR -38 170 16 1593 216 102 8 chr5 76684375 76684901 -122945249 + L1ME1 LINE L1 5515 6162 -4 23 0 0 0 chr5 76685198 76685221 -122944929 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr5 76685842 76685875 -122944275 + AT_rich Low_complexity Low_complexity 1 33 0 2274 116 0 7 chr5 76686354 76686657 -122943493 + AluSx SINE Alu 1 301 -11 2293 90 0 7 chr5 76687301 76687600 -122942550 + AluSq SINE Alu 1 297 -16 2417 79 0 22 chr5 76687871 76688189 -122941961 + AluY SINE Alu 1 311 0 2277 58 24 7 chr5 76688430 76688724 -122941426 - AluY SINE Alu -12 299 1 747 184 71 12 chr5 76688764 76688932 -122941218 + MER58A DNA MER1_type 45 222 -2 260 338 109 10 chr5 76689377 76689578 -122940572 + MIR SINE MIR 29 249 -13 1608 141 11 35 chr5 76689676 76689959 -122940191 + AluJb SINE Alu 21 296 -16 2070 116 0 10 chr5 76690624 76690917 -122939233 + AluSx SINE Alu 1 290 -22 22 0 0 0 chr5 76690928 76690950 -122939200 + AT_rich Low_complexity Low_complexity 1 22 0 2168 102 3 0 chr5 76691241 76691526 -122938624 + AluSx SINE Alu 2 287 -25 1871 133 27 7 chr5 76691641 76691935 -122938215 + AluSx SINE Alu 3 302 -10 22 56 0 0 chr5 76691996 76692032 -122938118 + AT_rich Low_complexity Low_complexity 1 36 0 1775 154 10 20 chr5 76692523 76692828 -122937322 + AluSq SINE Alu 1 302 -11 21 36 0 0 chr5 76692836 76692864 -122937286 + AT_rich Low_complexity Low_complexity 1 28 0 763 77 19 10 chr5 76695613 76695717 -122934433 + U6 snRNA snRNA 1 105 -2 31 88 0 0 chr5 76700262 76700342 -122929808 + AT_rich Low_complexity Low_complexity 1 80 0 1452 113 13 18 chr5 76700612 76700841 -122929309 + AluSg/x SINE Alu 81 308 -4 210 37 0 0 chr5 76700912 76700939 -122929211 + (A)n Simple_repeat Simple_repeat 1 27 0 2585 49 0 7 chr5 76700941 76701249 -122928901 + AluY SINE Alu 1 306 -5 2260 98 3 3 chr5 76701345 76701642 -122928508 + AluSg1 SINE Alu 1 297 -12 1682 163 21 7 chr5 76701785 76702067 -122928083 + AluSx SINE Alu 1 286 -26 661 62 21 0 chr5 76702096 76702193 -122927957 + L1PB1 LINE L1 5310 5408 -743 3028 82 52 0 chr5 76702193 76702617 -122927533 + MLT2A2 LTR ERVL 1 446 -7 4903 67 25 0 chr5 76702621 76703303 -122926847 + HERVL-A2 LTR ERVL 4 702 -4952 17903 68 14 8 chr5 76703316 76704729 -122925421 + HERVL-A2 LTR ERVL 841 2274 -3380 2485 72 3 0 chr5 76704729 76705035 -122925115 + AluSp SINE Alu 1 307 -6 17903 68 14 8 chr5 76705035 76706069 -122924081 + HERVL-A2 LTR ERVL 2274 3301 -2353 17986 72 15 1 chr5 76706071 76708505 -122921645 + HERVL-A2 LTR ERVL 3188 5654 0 3277 72 15 57 chr5 76708505 76708978 -122921172 + MLT2A2 LTR ERVL 1 453 0 5085 85 22 20 chr5 76708978 76709350 -122920800 + L1PB1 LINE L1 5404 5774 -377 2331 104 0 0 chr5 76709350 76709648 -122920502 + AluSc SINE Alu 1 298 -11 5085 85 22 20 chr5 76709648 76710016 -122920134 + L1PB1 LINE L1 5774 6145 -6 2335 99 0 0 chr5 76710027 76710330 -122919820 + AluY SINE Alu 1 303 -8 1175 130 130 5 chr5 76710365 76710471 -122919679 + AluSg SINE Alu 1 92 -218 2032 58 0 4 chr5 76710471 76710728 -122919422 + AluY SINE Alu 55 310 -1 1175 130 130 5 chr5 76710728 76710829 -122919321 + AluSg SINE Alu 92 234 -76 2300 105 0 0 chr5 76710896 76711200 -122918950 + AluSq SINE Alu 1 304 -9 2216 106 3 0 chr5 76712332 76712625 -122917525 - AluY SINE Alu -17 294 1 477 180 22 108 chr5 76712684 76712823 -122917327 - MER94 DNA DNA 0 134 8 2206 117 0 0 chr5 76713091 76713398 -122916752 - AluSx SINE Alu -5 307 1 848 185 51 6 chr5 76713502 76713680 -122916470 - MER3 DNA MER1_type -12 197 12 331 206 0 0 chr5 76713720 76713783 -122916367 - MER58A DNA MER1_type -45 179 117 25 51 0 0 chr5 76713790 76713829 -122916321 + AT_rich Low_complexity Low_complexity 1 39 0 454 230 0 10 chr5 76713846 76713946 -122916204 - MER58A DNA MER1_type -4 103 5 37 39 0 0 chr5 76716679 76716730 -122913420 + AT_rich Low_complexity Low_complexity 1 51 0 224 197 0 33 chr5 76716733 76716794 -122913356 + A-rich Low_complexity Low_complexity 3 61 0 423 261 54 65 chr5 76717207 76717391 -122912759 - MIR SINE MIR -50 212 31 218 105 26 0 chr5 76717419 76717457 -122912693 + (CA)n Simple_repeat Simple_repeat 2 40 0 508 354 146 9 chr5 76717769 76718312 -122911838 + L2 LINE L2 2123 2739 -575 209 254 111 16 chr5 76718396 76718459 -122911691 + L2 LINE L2 2901 2969 -303 391 281 108 23 chr5 76719753 76720188 -122909962 + L1ME4a LINE L1 5608 6079 -42 233 167 125 28 chr5 76721267 76721339 -122908811 + L1MB4 LINE L1 3605 3683 -2463 22 35 0 0 chr5 76721358 76721387 -122908763 + AT_rich Low_complexity Low_complexity 1 29 0 1403 94 0 0 chr5 76721445 76721625 -122908525 - AluSg/x SINE Alu -6 306 127 302 220 13 60 chr5 76721698 76721848 -122908302 + L1MB4 LINE L1 4527 4669 -1477 21 36 0 0 chr5 76721897 76721925 -122908225 + AT_rich Low_complexity Low_complexity 1 28 0 368 210 118 16 chr5 76722246 76722432 -122907718 + L1MB4 LINE L1 4910 5114 -1032 551 167 0 10 chr5 76722480 76722530 -122907620 + MER3 DNA MER1_type 1 49 -160 306 96 0 123 chr5 76722530 76722603 -122907547 - MER3 DNA MER1_type -2 207 144 270 254 84 34 chr5 76722633 76722855 -122907295 + L1MB4 LINE L1 5187 5419 -743 1352 128 0 66 chr5 76723019 76723276 -122906874 - Tigger5 DNA MER2_type 0 2323 2084 1145 193 67 0 chr5 76723265 76723488 -122906662 - Tigger5 DNA MER2_type -2085 238 1 * 346 270 104 35 chr5 76723488 76723747 -122906403 + L1ME3A LINE L1 5664 5940 -230 1350 117 96 5 chr5 76723757 76723954 -122906196 + AluSg SINE Alu 1 215 -95 2811 178 38 18 chr5 76723954 76724567 -122905583 + L1MB4 LINE L1 5556 6180 0 300 243 87 22 chr5 76724965 76725150 -122905000 + L1ME1 LINE L1 2078 2274 -4122 * 1911 227 78 76 chr5 76725148 76725233 -122904917 + L1ME1 LINE L1 5257 5340 -895 2338 78 0 7 chr5 76725233 76725526 -122904624 + AluY SINE Alu 1 291 -20 1911 227 78 76 chr5 76725526 76726360 -122903790 + L1ME1 LINE L1 5340 6188 -47 2504 59 0 10 chr5 76726388 76726695 -122903455 + AluY SINE Alu 1 304 -7 995 136 71 0 chr5 76726740 76726894 -122903256 - AluJo/FRAM SINE Alu -10 302 138 1750 177 0 4 chr5 76726895 76727172 -122902978 - AluSx SINE Alu -4 308 33 301 252 130 0 chr5 76727675 76727806 -122902344 + L1ME3A LINE L1 5778 5925 -245 1966 169 0 10 chr5 76728039 76728347 -122901803 - AluJb SINE Alu -7 305 1 779 188 0 23 chr5 76728366 76728499 -122901651 - FLAM_A SINE Alu -3 130 1 1917 140 51 87 chr5 76728556 76729234 -122900916 + L1MB7 LINE L1 5300 6151 -33 2280 103 3 0 chr5 76729254 76729545 -122900605 - AluSx SINE Alu -19 293 2 2269 101 29 7 chr5 76731097 76731403 -122898747 - AluSq SINE Alu 0 313 1 3980 77 41 0 chr5 76731487 76732019 -122898131 + MER41A LTR ERV1 1 554 0 4975 204 66 13 chr5 76732888 76734246 -122895904 + L1MB7 LINE L1 3884 5313 -833 951 206 0 0 chr5 76734250 76734449 -122895701 + L1MB7 LINE L1 5960 6158 -26 396 238 132 92 chr5 76734452 76734691 -122895459 + L1ME1 LINE L1 5846 6074 -92 306 0 0 0 chr5 76734691 76734725 -122895425 + (TC)n Simple_repeat Simple_repeat 2 35 0 189 0 0 0 chr5 76734724 76734745 -122895405 + (TA)n Simple_repeat Simple_repeat 2 22 0 * 396 238 132 92 chr5 76734725 76734808 -122895342 + L1ME1 LINE L1 6074 6160 -6 3265 161 84 56 chr5 76734828 76734857 -122895293 + L1MB7 LINE L1 5304 5331 -853 2093 118 14 0 chr5 76734857 76735153 -122894997 + AluSx SINE Alu 1 300 -12 3265 161 84 56 chr5 76735153 76735910 -122894240 + L1MB7 LINE L1 5331 6117 -67 2115 126 7 3 chr5 76735910 76736211 -122893939 - AluSx SINE Alu -10 302 1 3265 161 84 56 chr5 76736211 76736260 -122893890 + L1MB7 LINE L1 6117 6163 -21 1251 285 114 26 chr5 76736342 76737101 -122893049 + L2 LINE L2 2371 3218 -95 365 246 130 36 chr5 76737528 76737666 -122892484 - MLT1J1 LTR MaLR -3 443 293 429 231 183 41 chr5 76737666 76738106 -122892044 - MLT1H1 LTR MaLR 0 549 20 200 334 151 27 chr5 76738563 76739159 -122890991 + L2 LINE L2 2183 2852 -462 2256 221 125 127 chr5 76740516 76740614 -122889536 - HAL1 LINE L1 -2 2505 2408 375 60 0 0 chr5 76740614 76740664 -122889486 + (CA)n Simple_repeat Simple_repeat 2 51 0 2256 221 125 127 chr5 76740664 76741209 -122888941 - HAL1 LINE L1 -99 2408 1864 829 165 122 0 chr5 76741209 76741373 -122888777 + MER3 DNA MER1_type 7 190 -19 2256 221 125 127 chr5 76741373 76742416 -122887734 - HAL1 LINE L1 -643 1864 658 410 170 129 27 chr5 76742416 76742563 -122887587 - Charlie2 DNA MER1_type -13 2849 2688 2342 223 32 7 chr5 76742567 76743136 -122887014 - L1MC4a LINE L1 -11 7797 7215 1998 204 127 40 chr5 76743151 76743585 -122886565 - Charlie2 DNA MER1_type -161 2701 2306 2028 128 17 10 chr5 76743585 76743881 -122886269 - AluSq SINE Alu -15 298 1 1998 204 127 40 chr5 76743881 76744220 -122885930 - Charlie2 DNA MER1_type -556 2306 1861 250 214 0 0 chr5 76744311 76744367 -122885783 - Charlie2 DNA MER1_type -2529 253 198 599 273 143 13 chr5 76744493 76744801 -122885349 - HAL1 LINE L1 -2152 355 8 839 143 0 0 chr5 76745461 76745580 -122884570 + AluJb SINE Alu 171 289 -23 2079 122 3 10 chr5 76745610 76745904 -122884246 + AluSx SINE Alu 4 295 -17 213 311 112 81 chr5 76747029 76747190 -122882960 - MIR3 SINE MIR -1 207 42 1256 186 4 8 chr5 76747383 76747620 -122882530 - MER46A DNA MER2_type 0 236 1 236 188 20 20 chr5 76748499 76748600 -122881550 + (TA)n Simple_repeat Simple_repeat 1 101 0 21 0 0 0 chr5 76750911 76750932 -122879218 + AT_rich Low_complexity Low_complexity 1 21 0 1949 150 13 10 chr5 76751236 76751542 -122878608 + AluJb SINE Alu 1 307 -5 684 283 271 28 chr5 76751703 76752386 -122877764 - L3 LINE CR1 -144 1433 585 2124 102 20 7 chr5 76752581 76752874 -122877276 + AluSx SINE Alu 1 297 -15 2241 106 13 0 chr5 76753751 76754053 -122876097 + AluSp SINE Alu 1 306 -7 1394 149 84 84 chr5 76755141 76755431 -122874719 + THE1C LTR MaLR 1 293 -82 2372 104 3 7 chr5 76755431 76755739 -122874411 - AluSq SINE Alu -6 307 1 1394 149 84 84 chr5 76755739 76755816 -122874334 + THE1C LTR MaLR 292 368 -7 21 0 0 0 chr5 76756184 76756205 -122873945 + AT_rich Low_complexity Low_complexity 1 21 0 2385 82 0 3 chr5 76756462 76756765 -122873385 + AluY SINE Alu 1 302 -9 308 256 94 60 chr5 76756878 76756995 -122873155 - MIR3 SINE MIR -3 205 85 21 0 0 0 chr5 76757134 76757155 -122872995 + AT_rich Low_complexity Low_complexity 1 21 0 206 239 0 0 chr5 76757868 76757914 -122872236 + (CATATA)n Simple_repeat Simple_repeat 4 49 0 343 169 10 194 chr5 76757937 76758058 -122872092 + L1MB7 LINE L1 6008 6079 -105 2337 101 0 3 chr5 76758058 76758366 -122871784 + AluSg SINE Alu 4 310 0 343 169 10 194 chr5 76758366 76758445 -122871705 + L1MB7 LINE L1 6079 6171 -13 842 235 0 6 chr5 76758445 76758611 -122871539 - FRAM SINE Alu 0 166 2 317 247 124 98 chr5 76758661 76759425 -122870725 + L1M4 LINE L1 4037 4820 -1326 561 249 226 15 chr5 76759541 76759802 -122870348 - L1ME3 LINE L1 -210 5952 5637 264 162 182 88 chr5 76759890 76760038 -122870112 + L1MC5 LINE L1 7370 7531 -430 1778 156 36 19 chr5 76760090 76760397 -122869753 + AluJo SINE Alu 1 312 0 24 0 0 0 chr5 76760423 76760447 -122869703 + AT_rich Low_complexity Low_complexity 1 24 0 2202 116 7 0 chr5 76760453 76760756 -122869394 + AluY SINE Alu 1 305 -6 2341 107 0 0 chr5 76761153 76761462 -122868688 + AluY SINE Alu 2 310 -1 984 197 27 27 chr5 76762592 76762780 -122867370 - AluJo SINE Alu -124 188 1 258 146 0 0 chr5 76762892 76762940 -122867210 + MER113 DNA MER1_type? 1 48 -473 1773 138 57 3 chr5 76763047 76763381 -122866769 - L1MB4 LINE L1 -6 6174 5823 298 323 69 0 chr5 76764193 76764323 -122865827 - MIR SINE MIR -82 180 42 29 0 0 0 chr5 76764331 76764360 -122865790 + AT_rich Low_complexity Low_complexity 1 29 0 641 278 12 12 chr5 76764456 76764625 -122865525 + MIR3 SINE MIR 19 187 -21 874 280 9 5 chr5 76765983 76766197 -122863953 - MIR SINE MIR -28 234 20 271 253 253 0 chr5 76766452 76766535 -122863615 + MIR SINE MIR 4 107 -155 1082 185 5 0 chr5 76766822 76767006 -122863144 - AluJo SINE Alu -2 310 126 751 288 56 5 chr5 76769207 76769422 -122860728 - MIR SINE MIR -6 256 31 1347 67 0 17 chr5 76769617 76769797 -122860353 - AluY SINE Alu -6 305 129 6244 134 13 17 chr5 76769902 76770012 -122860138 - L1MA3 LINE L1 0 6305 6196 2102 136 0 3 chr5 76770012 76770322 -122859828 + AluSx SINE Alu 1 309 0 6244 134 13 17 chr5 76770322 76771083 -122859067 - L1MA3 LINE L1 -109 6196 5433 1919 156 3 16 chr5 76771083 76771398 -122858752 - AluJb SINE Alu -1 311 1 6244 134 13 17 chr5 76771398 76772433 -122857717 - L1MA3 LINE L1 -872 5433 4403 559 288 34 105 chr5 76772613 76772728 -122857422 + L3 LINE CR1 1001 1123 -454 2378 89 0 0 chr5 76772728 76773031 -122857119 + AluY SINE Alu 1 303 -8 559 288 34 105 chr5 76773031 76773169 -122856981 + L3 LINE CR1 1123 1225 -352 1710 141 9 75 chr5 76773169 76773503 -122856647 + AluJb SINE Alu 1 312 0 559 288 34 105 chr5 76773503 76773599 -122856551 + L3 LINE CR1 1225 1326 -251 2065 144 8 26 chr5 76773967 76774006 -122856144 + L1PA15 LINE L1 5788 5826 -339 2242 117 0 7 chr5 76774006 76774313 -122855837 + AluSg SINE Alu 1 305 -5 2065 144 8 26 chr5 76774313 76774656 -122855494 + L1PA15 LINE L1 5826 6163 -2 2070 145 3 3 chr5 76774832 76775135 -122855015 + AluSx SINE Alu 1 303 -9 2449 88 0 3 chr5 76775181 76775488 -122854662 - AluSg SINE Alu -3 307 2 778 165 0 15 chr5 76775638 76775771 -122854379 + FLAM_C SINE Alu 2 132 -1 510 271 32 26 chr5 76775915 76776070 -122854080 - MIR SINE MIR -61 201 46 277 321 32 37 chr5 76776305 76776495 -122853655 + L2 LINE L2 1851 2039 -1275 * 348 307 8 31 chr5 76776482 76776609 -122853541 - L2 LINE L2 -1035 2279 2156 207 0 0 0 chr5 76776729 76776752 -122853398 + (A)n Simple_repeat Simple_repeat 1 23 0 1986 138 3 3 chr5 76776757 76777048 -122853102 + AluSg SINE Alu 1 291 -19 284 298 72 61 chr5 76777170 76777351 -122852799 + L2 LINE L2 2168 2350 -964 1321 152 45 0 chr5 76777370 76777568 -122852582 + AluSq SINE Alu 29 235 -78 208 324 139 46 chr5 76777756 76777929 -122852221 - MIR SINE MIR -54 208 20 276 323 79 82 chr5 76778227 76778518 -122851632 + L2 LINE L2 2868 3157 -115 189 162 108 0 chr5 76778817 76778854 -122851296 + L2 LINE L2 3231 3271 -1 306 310 69 0 chr5 76779327 76779443 -122850707 - L3 LINE CR1 -2 1575 1452 2043 102 4 4 chr5 76780150 76780425 -122849725 - AluSg SINE Alu -35 275 1 1706 42 0 0 chr5 76783695 76783886 -122846264 + L1PA5 LINE L1 5963 6153 -1 225 0 0 0 chr5 76783886 76783911 -122846239 + (TA)n Simple_repeat Simple_repeat 1 25 0 397 301 64 39 chr5 76783940 76784096 -122846054 - MER91A DNA MER1_type -33 163 4 2751 193 70 36 chr5 76784307 76784927 -122845223 + MER67B LTR ERV1 1 645 -16 2317 98 3 3 chr5 76784927 76785233 -122844917 - AluSq SINE Alu -7 306 1 2751 193 70 36 chr5 76785233 76785251 -122844899 + MER67B LTR ERV1 645 661 0 3835 207 43 6 chr5 76785486 76785581 -122844569 - L1M4 LINE L1 -2905 3241 3151 2578 52 0 3 chr5 76785581 76785887 -122844263 - AluY SINE Alu -6 305 1 3835 207 43 6 chr5 76785887 76786736 -122843414 - L1M4 LINE L1 -2995 3151 2262 539 289 26 4 chr5 76786739 76787009 -122843141 - L1M4 LINE L1 -746 5400 5125 11612 99 7 1 chr5 76787470 76789055 -122841095 - L1P3 LINE L1 -4863 1598 5 256 164 73 18 chr5 76789061 76789116 -122841034 + L1MB7 LINE L1 6127 6184 0 3618 213 110 11 chr5 76789417 76789975 -122840175 + L1MB8 LINE L1 3260 3761 -2385 1846 108 63 0 chr5 76789975 76790270 -122839880 + AluSx SINE Alu 1 312 0 3618 213 110 11 chr5 76790270 76790643 -122839507 + L1MB8 LINE L1 3761 4285 -1861 1383 140 0 18 chr5 76791022 76791250 -122838900 - AluJb SINE Alu -1 311 88 796 316 113 28 chr5 76792328 76792860 -122837290 + L2 LINE L2 2027 2603 -711 2547 117 5 40 chr5 76792912 76793289 -122836861 + THE1B LTR MaLR 1 364 0 187 254 73 18 chr5 76793491 76793546 -122836604 + L2 LINE L2 3215 3272 0 550 305 40 0 chr5 76793669 76793843 -122836307 + MIR SINE MIR 70 250 -12 1873 115 41 0 chr5 76794055 76794325 -122835825 - AluSx SINE Alu -13 299 19 2067 138 3 3 chr5 76794920 76795225 -122834925 - AluSx SINE Alu -7 305 1 542 175 24 16 chr5 76795225 76795351 -122834799 + L1MB8 LINE L1 5268 5394 -752 999 159 53 0 chr5 76795351 76795521 -122834629 + AluSg/x SINE Alu 134 312 0 3376 187 25 42 chr5 76795523 76795757 -122834393 + L1MB8 LINE L1 5385 5621 -557 2242 205 119 10 chr5 76795757 76796260 -122833890 + MER74A LTR ERVL 1 558 0 3376 187 25 42 chr5 76796260 76796791 -122833359 + L1MB8 LINE L1 5621 6137 -41 915 83 14 76 chr5 76796807 76796917 -122833233 - L1PA7 LINE L1 0 6154 6054 2244 103 3 3 chr5 76796917 76797209 -122832941 - AluSg SINE Alu -18 292 1 915 83 14 76 chr5 76797209 76797243 -122832907 - L1PA7 LINE L1 -100 6054 6019 1934 151 3 0 chr5 76797407 76797691 -122832459 + AluSx SINE Alu 1 285 -27 26 0 0 0 chr5 76797691 76797717 -122832433 + AT_rich Low_complexity Low_complexity 1 26 0 460 249 171 44 chr5 76798275 76798406 -122831744 + HAL1 LINE L1 882 995 -1512 2199 106 0 0 chr5 76798406 76798699 -122831451 + AluSx SINE Alu 11 303 -9 460 249 171 44 chr5 76798699 76798824 -122831326 + HAL1 LINE L1 995 1103 -1404 2232 119 0 0 chr5 76798824 76799127 -122831023 + AluSx SINE Alu 1 303 -9 460 249 171 44 chr5 76799127 76799302 -122830848 + HAL1 LINE L1 1103 1369 -1138 405 219 65 8 chr5 76799457 76799580 -122830570 + L1MC5 LINE L1 7800 7929 -32 279 0 0 0 chr5 76799606 76799637 -122830513 + (T)n Simple_repeat Simple_repeat 1 31 0 859 135 14 14 chr5 76799840 76799981 -122830169 - AluSq/x SINE Alu -171 142 2 1609 156 3 24 chr5 76799985 76800294 -122829856 - AluJo SINE Alu 0 303 1 184 262 24 0 chr5 76800306 76800348 -122829802 - MER5B DNA MER1_type -126 52 10 21 0 0 0 chr5 76800652 76800673 -122829477 + AT_rich Low_complexity Low_complexity 1 21 0 2207 78 14 0 chr5 76800678 76800989 -122829161 + AluSp SINE Alu 1 315 0 2205 92 0 3 chr5 76801020 76801302 -122828848 + AluSx SINE Alu 14 294 -18 328 167 0 0 chr5 76801306 76801360 -122828790 + Alu SINE Alu 243 296 -5 547 307 63 1 chr5 76801499 76801761 -122828389 + L1ME LINE L1 5316 5592 -578 180 0 0 0 chr5 76801795 76801815 -122828335 + (A)n Simple_repeat Simple_repeat 1 20 0 1041 108 0 0 chr5 76801835 76801965 -122828185 + AluSq/x SINE Alu 1 130 -183 646 154 9 0 chr5 76801965 76802075 -122828075 + HERVH LTR ERV1 5906 6016 -1697 * 3689 106 12 28 chr5 76802068 76802634 -122827516 + HERVH LTR ERV1 7157 7713 0 2103 85 50 11 chr5 76802634 76803021 -122827129 + LTR7 LTR ERV1 1 450 0 1100 192 62 39 chr5 76803197 76803457 -122826693 + AluJo SINE Alu 1 266 -46 2500 48 3 3 chr5 76803486 76803780 -122826370 - AluY SINE Alu -17 294 1 1256 137 99 11 chr5 76804110 76804373 -122825777 - AluJb SINE Alu -16 286 1 560 273 109 13 chr5 76804845 76805083 -122825067 - MIR SINE MIR 0 262 2 3753 98 12 8 chr5 76805484 76805993 -122824157 + MER9 LTR ERVK 1 511 0 2195 99 0 3 chr5 76806048 76806331 -122823819 - AluSg SINE Alu -17 293 12 414 262 67 83 chr5 76806820 76807282 -122822868 + MLT1J LTR MaLR 3 528 -87 2362 107 0 0 chr5 76807396 76807705 -122822445 + AluSx SINE Alu 1 309 -3 1708 140 16 0 chr5 76807705 76807962 -122822188 + L1PA16 LINE L1 5905 6165 -1 2331 95 3 3 chr5 76808038 76808343 -122821807 - AluSp SINE Alu -8 305 1 1319 197 15 34 chr5 76808846 76809115 -122821035 - AluJo SINE Alu -19 293 30 2301 154 35 0 chr5 76809891 76810260 -122819890 - MSTA LTR MaLR 0 428 47 253 132 0 0 chr5 76810262 76810300 -122819850 - MSTA LTR MaLR -346 82 45 2211 104 31 0 chr5 76810300 76810587 -122819563 - AluSx SINE Alu -16 296 1 225 0 0 0 chr5 76810602 76810627 -122819523 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1192 75 0 0 chr5 76810639 76810785 -122819365 - L1PA3 LINE L1 -10 6145 6000 957 247 119 35 chr5 76810829 76811206 -122818944 - MLT1I LTR MaLR 0 409 1 300 254 15 0 chr5 76811219 76811286 -122818864 - LTR16C LTR ERVL -17 474 407 28257 80 6 17 chr5 76811392 76812226 -122817924 - L1PA7 LINE L1 -279 5875 5033 2462 55 0 29 chr5 76812226 76812537 -122817613 - AluSp SINE Alu -11 302 1 28257 80 6 17 chr5 76812537 76812835 -122817315 - L1PA7 LINE L1 -1121 5033 4733 2543 62 0 3 chr5 76812835 76813139 -122817011 - AluY SINE Alu -8 303 1 28257 80 6 17 chr5 76813139 76814679 -122815471 - L1PA7 LINE L1 -1421 4733 3177 3880 106 6 4 chr5 76814679 76815188 -122814962 - MER9 LTR ERVK 0 511 2 28257 80 6 17 chr5 76815188 76816959 -122813191 - L1PA7 LINE L1 -2977 3177 1483 1306 147 11 112 chr5 76817059 76817344 -122812806 - AluJb SINE Alu -56 256 1 305 304 16 16 chr5 76817861 76817986 -122812164 + L2 LINE L2 2898 3022 -250 511 290 44 75 chr5 76818363 76818517 -122811633 - L1ME3A LINE L1 -345 5825 5668 2098 130 7 0 chr5 76818517 76818809 -122811341 - AluSq SINE Alu -19 294 1 821 177 0 88 chr5 76818819 76819000 -122811150 - FRAM SINE Alu -1 165 1 511 290 44 75 chr5 76819000 76819155 -122810995 - L1ME3A LINE L1 -511 5659 5515 205 83 0 28 chr5 76819341 76819377 -122810773 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 484 269 82 25 chr5 76819380 76819625 -122810525 - L1P5 LINE L1 -628 5528 5270 360 0 0 0 chr5 76819660 76819700 -122810450 + (TG)n Simple_repeat Simple_repeat 2 41 0 227 230 193 30 chr5 76819748 76819883 -122810267 + MIR SINE MIR 106 262 0 25 75 0 0 chr5 76819903 76819956 -122810194 + AT_rich Low_complexity Low_complexity 1 53 0 2285 112 0 3 chr5 76820043 76820346 -122809804 - AluSq SINE Alu -11 302 1 2013 110 35 7 chr5 76820573 76820855 -122809295 - AluSx SINE Alu -22 290 1 243 0 0 0 chr5 76820870 76820897 -122809253 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1350 46 0 0 chr5 76820900 76821053 -122809097 - L1PA3 LINE L1 -3 6152 6000 991 244 119 35 chr5 76821097 76821474 -122808676 - MLT1I LTR MaLR 0 409 1 756 307 54 3 chr5 76821487 76821800 -122808350 - LTR16C LTR ERVL -17 474 146 535 204 14 3 chr5 76822168 76822289 -122807861 - MIR SINE MIR -56 152 30 1630 115 8 0 chr5 76823160 76823394 -122806756 + AluSc SINE Alu 74 309 0 204 67 0 0 chr5 76823447 76823477 -122806673 + (A)n Simple_repeat Simple_repeat 1 30 0 778 256 162 45 chr5 76823488 76824190 -122805960 - HAL1 LINE L1 -151 2356 1473 2645 48 0 0 chr5 76824235 76824545 -122805605 + AluY SINE Alu 2 311 0 333 389 14 0 chr5 76824601 76824740 -122805410 - MIR3 SINE MIR -10 198 58 406 204 208 61 chr5 76824839 76825118 -122805032 - L1MC5 LINE L1 -32 7929 7610 970 34 62 0 chr5 76825119 76825265 -122804885 + L1P LINE L1 1 155 -5991 469 269 122 20 chr5 76825370 76825567 -122804583 - MLT1H LTR MaLR -316 233 17 1596 264 88 58 chr5 76825850 76826013 -122804137 + MLT1E LTR MaLR 3 160 -433 623 48 12 0 chr5 76826013 76826096 -122804054 + (TTATG)n Simple_repeat Simple_repeat 2 85 0 1596 264 88 58 chr5 76826096 76826503 -122803647 + MLT1E LTR MaLR 160 590 -3 2206 91 10 0 chr5 76826507 76826804 -122803346 - AluY SINE Alu -11 300 1 749 143 16 24 chr5 76826804 76826914 -122803236 - AluSq SINE Alu -68 245 135 2346 47 0 33 chr5 76826914 76827214 -122802936 - AluY SINE Alu -21 290 1 749 143 16 24 chr5 76827214 76827229 -122802921 - AluSq SINE Alu -178 135 121 1446 113 13 18 chr5 76827312 76827541 -122802609 - AluSg/x SINE Alu -4 306 79 31 88 0 0 chr5 76827811 76827891 -122802259 + AT_rich Low_complexity Low_complexity 1 80 0 2089 90 35 3 chr5 77030819 77031109 -122599041 + LTR12 LTR ERV1 416 714 0 1874 143 48 0 chr5 77031115 77031409 -122598741 - L1P LINE L1 -5837 309 2 2257 134 94 8 chr5 77031703 77032097 -122598053 - MSTA LTR MaLR 0 428 1 2146 110 3 35 chr5 77032254 77032571 -122597579 + AluY SINE Alu 1 307 -4 1892 62 25 0 chr5 77032654 77032897 -122597253 - L1PA7 LINE L1 -1 6153 5905 2015 222 61 61 chr5 77032897 77033575 -122596575 + L1M4 LINE L1 4096 4773 -1373 990 228 5 9 chr5 77033575 77033794 -122596356 - MER20 DNA MER1_type -1 218 1 2015 222 61 61 chr5 77033794 77033866 -122596284 + L1M4 LINE L1 4773 4849 -1297 1883 122 0 8 chr5 77033866 77034129 -122596021 - AluSx SINE Alu -13 299 39 2015 222 61 61 chr5 77034129 77034164 -122595986 + L1M4 LINE L1 4848 4882 -1264 7912 28 6 0 chr5 77034264 77035970 -122594180 + L1PA4 LINE L1 4437 6147 -8 407 267 47 20 chr5 77036102 77036252 -122593898 + L1ME1 LINE L1 5923 6076 -90 242 361 59 17 chr5 77036681 77036800 -122593350 + MER5A DNA MER1_type 66 189 0 24 77 0 0 chr5 77036837 77036889 -122593261 + AT_rich Low_complexity Low_complexity 1 52 0 202 214 24 0 chr5 77037028 77037070 -122593080 - L2 LINE L2 -20 3293 3251 272 280 97 0 chr5 77037071 77037164 -122592986 - MIR SINE MIR -106 156 55 267 263 53 0 chr5 77037187 77037203 -122592947 - L1MA4A LINE L1 -2 6301 6286 12615 190 48 28 chr5 77037203 77040987 -122589163 - L1PB4 LINE L1 -6 6852 2968 2269 100 3 0 chr5 77040987 77041276 -122588874 - AluSg SINE Alu -16 294 5 12615 190 48 28 chr5 77041276 77041525 -122588625 - L1PB4 LINE L1 -3890 2968 2725 1465 160 101 11 chr5 77041800 77042068 -122588082 - AluJo SINE Alu -9 293 2 217 253 187 0 chr5 77042204 77042279 -122587871 + MIR3 SINE MIR 109 197 -11 5256 124 13 4 chr5 77042294 77043082 -122587068 + L1PA16 LINE L1 5362 6156 -10 1104 148 66 0 chr5 77043414 77043610 -122586540 - MER3 DNA MER1_type 0 209 1 759 281 101 0 chr5 77045121 77045349 -122584801 + MIR SINE MIR 10 260 -2 22 0 0 0 chr5 77045779 77045801 -122584349 + AT_rich Low_complexity Low_complexity 1 22 0 25 102 0 0 chr5 77046537 77046625 -122583525 + AT_rich Low_complexity Low_complexity 1 88 0 290 242 137 11 chr5 77046835 77046930 -122583220 - MIR SINE MIR -110 152 46 24 53 0 0 chr5 77047904 77047942 -122582208 + AT_rich Low_complexity Low_complexity 1 38 0 1012 182 93 18 chr5 77048445 77048670 -122581480 + Charlie1 DNA MER1_type 1 242 -2519 772 146 22 7 chr5 77048653 77048790 -122581360 + Charlie1 DNA MER1_type 2623 2761 0 * 9120 26 0 0 chr5 77050796 77052483 -122577667 - L1PA3 LINE L1 -177 5978 4292 821 11 0 0 chr5 77052465 77052558 -122577592 + L1PA3 LINE L1 4220 4312 -1834 * 435 256 23 61 chr5 77053747 77053902 -122576248 - MIR SINE MIR -82 126 14 991 73 0 0 chr5 77054795 77054919 -122575231 + AluY SINE Alu 144 267 -44 281 298 168 0 chr5 77055954 77056162 -122573988 - L1ME LINE L1 -331 5790 5548 2264 97 3 0 chr5 77056324 77056612 -122573538 - AluSc SINE Alu -20 289 1 21 0 0 0 chr5 77056902 77056923 -122573227 + AT_rich Low_complexity Low_complexity 1 21 0 1035 130 35 13 chr5 77057836 77058114 -122572036 - pTR5 LTR ERV1 -501 213 1 858 246 31 42 chr5 77058300 77058589 -122571561 - pTR5 LTR ERV1 -1410 1028 743 39956 52 2 3 chr5 77058589 77064440 -122565710 + L1PA4 LINE L1 312 6155 0 29 0 0 0 chr5 77064469 77064498 -122565652 + AT_rich Low_complexity Low_complexity 1 29 0 275 206 10 69 chr5 77064539 77064641 -122565509 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 2211 114 0 0 chr5 77064974 77065272 -122564878 + AluSq SINE Alu 1 298 -15 8252 152 37 30 chr5 77065510 77067820 -122562330 + L1MA6 LINE L1 3703 6037 -263 2096 116 0 0 chr5 77067820 77068095 -122562055 + AluSc SINE Alu 6 280 -29 8252 152 37 30 chr5 77068095 77068344 -122561806 + L1MA6 LINE L1 6037 6283 -17 25 65 0 0 chr5 77068355 77068401 -122561749 + AT_rich Low_complexity Low_complexity 1 46 0 288 0 0 0 chr5 77069560 77069592 -122560558 + (TG)n Simple_repeat Simple_repeat 2 33 0 351 0 0 0 chr5 77069648 77069687 -122560463 + (TG)n Simple_repeat Simple_repeat 2 40 0 23 54 0 0 chr5 77071545 77071582 -122558568 + AT_rich Low_complexity Low_complexity 1 37 0 1864 220 62 30 chr5 77072222 77072543 -122557607 - L1M4 LINE L1 -2068 4078 3732 1816 155 0 63 chr5 77072543 77072860 -122557290 - AluJb SINE Alu -15 297 1 1864 220 62 30 chr5 77072860 77073066 -122557084 - L1M4 LINE L1 -2414 3732 3534 268 181 51 0 chr5 77073067 77073139 -122557011 + MLT1B LTR MaLR 1 80 -294 31 26 0 0 chr5 77073236 77073274 -122556876 + AT_rich Low_complexity Low_complexity 1 38 0 394 257 10 0 chr5 77073275 77073376 -122556774 - L1MA10 LINE L1 -30 6304 6203 333 314 93 47 chr5 77073616 77074023 -122556127 - L1M4 LINE L1 -1049 5097 4672 232 318 64 0 chr5 77074143 77074363 -122555787 - L1M4 LINE L1 -1543 4603 4370 804 216 87 28 chr5 77074431 77074761 -122555389 - L1MD3 LINE L1 0 8042 7703 513 314 12 29 chr5 77074992 77075164 -122554986 + MIR3 SINE MIR 18 186 -22 645 288 49 44 chr5 77077091 77077522 -122552628 + L1ME4a LINE L1 5689 6121 0 2110 137 0 3 chr5 77079428 77079741 -122550409 - AluSx SINE Alu 0 312 1 277 155 35 0 chr5 77079881 77079939 -122550211 + MARNA DNA Mariner 283 342 -244 2555 179 43 8 chr5 77080401 77080908 -122549242 + LTR45 LTR ERV1 1 525 0 336 239 239 0 chr5 77080985 77081098 -122549052 + MER103 DNA DNA 20 159 -7 205 238 0 0 chr5 77081298 77081340 -122548810 - L2 LINE L2 -12 3260 3219 1000 210 0 34 chr5 77081543 77081748 -122548402 + AluJo SINE Alu 86 283 -29 29 60 0 0 chr5 77082328 77082378 -122547772 + AT_rich Low_complexity Low_complexity 1 50 0 2331 119 3 0 chr5 77082826 77083137 -122547013 - AluSx SINE Alu 0 312 1 353 111 19 0 chr5 77083170 77083224 -122546926 + Alu SINE Alu 1 55 -245 6114 74 16 46 chr5 77083574 77084530 -122545620 + SVA Other Other 457 1383 -3 275 232 99 13 chr5 77084534 77084685 -122545465 - MER112 DNA MER1_type -89 171 8 1687 153 3 62 chr5 77084729 77085036 -122545114 - AluJo SINE Alu -23 289 1 2081 137 0 3 chr5 77085063 77085356 -122544794 - AluSx SINE Alu -9 303 12 1320 253 28 28 chr5 77085448 77085844 -122544306 + MSTD LTR MaLR 1 396 0 434 250 70 35 chr5 77085871 77086043 -122544107 + MER5A DNA MER1_type 7 184 -5 321 194 71 31 chr5 77087237 77087399 -122542751 - MLT1B LTR MaLR -26 364 269 426 227 227 0 chr5 77088034 77088197 -122541953 - MIR SINE MIR -9 253 54 184 162 0 27 chr5 77088872 77088909 -122541241 - L3 LINE CR1 -866 711 676 963 237 113 80 chr5 77089271 77089304 -122540846 + MLT1E LTR MaLR 1 31 -562 1856 184 0 0 chr5 77089304 77089598 -122540552 + AluJb SINE Alu 1 294 -18 963 237 113 80 chr5 77089598 77090024 -122540126 + MLT1E LTR MaLR 31 475 -118 1499 165 4 13 chr5 77090957 77091194 -122538956 + AluJo SINE Alu 53 287 -25 838 338 46 43 chr5 77091314 77092159 -122537991 + ERVL LTR ERVL 787 1613 -4041 1188 249 47 18 chr5 77092291 77092717 -122537433 + MLT1E1 LTR MaLR 8 424 -230 1556 102 4 32 chr5 77093405 77093651 -122536499 + AluSg/x SINE Alu 67 305 -5 2911 117 26 63 chr5 77094346 77094967 -122535183 + MER4B LTR ERV1 9 778 -1 21 36 0 0 chr5 77094998 77095026 -122535124 + AT_rich Low_complexity Low_complexity 1 28 0 934 198 0 6 chr5 77095658 77095825 -122534325 - FRAM SINE Alu 0 166 1 2285 109 3 0 chr5 77096096 77096407 -122533743 + AluSx SINE Alu 1 312 0 1402 159 89 11 chr5 77097609 77097880 -122532270 - AluJo SINE Alu -20 292 1 342 277 49 75 chr5 77097948 77098215 -122531935 - L1MC4 LINE L1 -965 7077 6818 249 293 73 12 chr5 77098215 77098297 -122531853 + L2 LINE L2 3226 3312 -1 687 175 0 70 chr5 77098811 77098954 -122531196 + FLAM_A SINE Alu 1 133 0 414 0 0 0 chr5 77098963 77099009 -122531141 + (TA)n Simple_repeat Simple_repeat 2 47 0 27 29 0 0 chr5 77099189 77099223 -122530927 + AT_rich Low_complexity Low_complexity 1 34 0 583 275 78 26 chr5 77100192 77100538 -122529612 + L1ME4a LINE L1 5734 6097 -24 2489 173 79 38 chr5 77100581 77100991 -122529159 - Charlie1a DNA MER1_type -1311 1450 999 2511 181 114 50 chr5 77100991 77101730 -122528420 + LTR48 LTR ERV1 1 786 -1 2489 173 79 38 chr5 77101730 77102002 -122528148 - Charlie1a DNA MER1_type -1762 999 740 2046 184 11 45 chr5 77102045 77102095 -122528055 - Charlie1a DNA MER1_type -2309 452 402 2037 148 0 0 chr5 77102095 77102392 -122527758 + AluSx SINE Alu 1 297 -15 2046 184 11 45 chr5 77102392 77102809 -122527341 - Charlie1a DNA MER1_type -2359 402 1 225 65 0 0 chr5 77102833 77102864 -122527286 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 2025 154 3 3 chr5 77102868 77103174 -122526976 - AluSx SINE Alu -6 306 1 4426 169 37 17 chr5 77103671 77104816 -122525334 - L1MB3 LINE L1 0 6183 5016 1396 190 67 4 chr5 77105031 77105148 -122525002 + AluJb SINE Alu 1 109 -203 240 59 0 0 chr5 77105148 77105182 -122524968 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1396 190 67 4 chr5 77105182 77105333 -122524817 + AluJb SINE Alu 109 286 -26 266 170 0 0 chr5 77106061 77106108 -122524042 - AluJ/FLAM SINE Alu -222 80 34 1585 219 65 53 chr5 77107592 77108104 -122522046 - MLT2B1 LTR ERVL 0 520 3 196 313 211 23 chr5 77108933 77109061 -122521089 - MER5A DNA MER1_type 0 189 38 4613 211 6 32 chr5 77109527 77110703 -122519447 - L1PA13 LINE L1 -3098 3048 1904 * 9849 171 23 51 chr5 77110699 77113059 -122517091 + L1PA13 LINE L1 3043 5330 -835 2115 124 3 7 chr5 77113059 77113357 -122516793 + AluSp SINE Alu 1 297 -16 9849 171 23 51 chr5 77113357 77113518 -122516632 + L1PA13 LINE L1 5330 5494 -671 1066 167 0 0 chr5 77113518 77113674 -122516476 + AluSx SINE Alu 1 156 -156 1698 131 7 7 chr5 77113675 77113966 -122516184 + L1PA13 LINE L1 5795 6085 -78 2357 143 49 35 chr5 77114312 77114740 -122515410 + Tigger2a DNA MER2_type 1 434 0 5568 63 11 4 chr5 77115172 77115923 -122514227 - L1PA8A LINE L1 -1 6130 5375 1500 173 20 96 chr5 77116376 77116781 -122513369 + MLT1A2 LTR MaLR 1 374 0 429 20 0 0 chr5 77116829 77116879 -122513271 + (TA)n Simple_repeat Simple_repeat 1 50 0 553 268 66 36 chr5 77117151 77117651 -122512499 + L1M4 LINE L1 4795 5309 -837 239 93 0 23 chr5 77117974 77118017 -122512133 + L1ME1 LINE L1 5780 5821 -341 3837 177 41 12 chr5 77118391 77119119 -122511031 + L1M1 LINE L1 989 1737 -5828 5944 112 34 23 chr5 77119179 77120266 -122509884 + L1MA3 LINE L1 5207 6305 0 2218 142 3 6 chr5 77120421 77120759 -122509391 + MER1B DNA MER1_type 1 337 0 31 0 0 0 chr5 77121402 77121433 -122508717 + AT_rich Low_complexity Low_complexity 1 31 0 1188 162 49 84 chr5 77122251 77122300 -122507850 + MER6A DNA MER2_type 1 50 -555 2247 112 0 0 chr5 77122300 77122595 -122507555 + AluSg SINE Alu 16 310 0 1188 162 49 84 chr5 77122595 77122853 -122507297 + MER6A DNA MER2_type 50 297 -308 2250 140 0 0 chr5 77122857 77123221 -122506929 + MER6A DNA MER2_type 242 605 0 1664 153 36 33 chr5 77123775 77124076 -122506074 - AluJo SINE Alu -10 302 1 252 274 36 36 chr5 77124144 77124228 -122505922 - L2 LINE L2 -81 3191 3108 859 146 12 35 chr5 77124270 77124464 -122505686 + L1M1 LINE L1 5312 5500 -703 857 130 24 0 chr5 77124484 77124607 -122505543 + FRAM SINE Alu 24 149 -27 387 0 0 0 chr5 77124607 77124650 -122505500 + (CA)n Simple_repeat Simple_repeat 2 44 0 1841 148 44 3 chr5 77124957 77125254 -122504896 - AluSx SINE Alu -3 309 1 25 0 0 0 chr5 77125266 77125291 -122504859 + AT_rich Low_complexity Low_complexity 1 25 0 525 197 94 0 chr5 77125295 77125422 -122504728 + L1ME1 LINE L1 6010 6148 -18 1256 203 159 60 chr5 77125438 77125748 -122504402 + MER34 LTR ERV1 11 387 -155 2195 137 0 9 chr5 77125748 77126063 -122504087 - AluSx SINE Alu 0 312 1 1256 203 159 60 chr5 77126063 77126235 -122503915 + MER34 LTR ERV1 387 541 -1 26 50 0 0 chr5 77126242 77126282 -122503868 + AT_rich Low_complexity Low_complexity 1 40 0 2067 139 0 3 chr5 77126334 77126628 -122503522 + AluSx SINE Alu 1 293 -19 297 259 146 46 chr5 77126635 77126963 -122503187 + L1ME4a LINE L1 5642 6002 -119 717 256 0 34 chr5 77127061 77127237 -122502913 + AluJo SINE Alu 122 291 -21 291 307 68 27 chr5 77127515 77127929 -122502221 - L1M4 LINE L1 -1100 5046 4616 636 117 0 0 chr5 77127942 77128036 -122502114 - AluSg/x SINE Alu -8 302 209 30734 48 1 2 chr5 77128200 77132174 -122497976 - L1P LINE L1 -2173 3973 2 23245 87 4 6 chr5 77132171 77136507 -122493643 + L1PA7 LINE L1 1831 6154 0 * 2317 115 0 0 chr5 77137101 77137413 -122492737 - AluSx SINE Alu 0 312 1 804 201 58 0 chr5 77137705 77137894 -122492256 - MER63 DNA MER1_type 0 1061 862 303 167 191 36 chr5 77137957 77138001 -122492149 - MER63 DNA MER1_type -113 723 687 2650 128 67 17 chr5 77138001 77138463 -122491687 + MER31A LTR ERV1 1 485 0 303 167 191 36 chr5 77138463 77138502 -122491648 - MER63 DNA MER1_type -149 687 1 2252 101 0 0 chr5 77138664 77138960 -122491190 - AluSq SINE Alu -17 296 1 1874 166 7 3 chr5 77139192 77139493 -122490657 + AluJb SINE Alu 1 302 -10 881 266 84 40 chr5 77139504 77139618 -122490532 + L1ME3A LINE L1 5284 5391 -779 2141 137 0 0 chr5 77139618 77139918 -122490232 + AluSx SINE Alu 1 300 -12 881 266 84 40 chr5 77139918 77140360 -122489790 + L1ME3A LINE L1 5391 5865 -305 21 36 0 0 chr5 77140628 77140656 -122489494 + AT_rich Low_complexity Low_complexity 1 28 0 2016 145 3 3 chr5 77140839 77141142 -122489008 + AluSx SINE Alu 1 303 -9 2068 118 0 3 chr5 77141377 77141687 -122488463 - AluSx SINE Alu 0 309 1 183 243 0 0 chr5 77141789 77141826 -122488324 + L3 LINE CR1 1537 1573 -4 286 254 109 36 chr5 77142750 77142860 -122487290 + MIR SINE MIR 23 140 -68 785 292 60 30 chr5 77143187 77143619 -122486531 + L1ME3A LINE L1 4711 5177 -1028 1964 148 17 0 chr5 77143619 77143917 -122486233 - AluSx SINE Alu -8 304 2 785 292 60 30 chr5 77143917 77144208 -122485942 + L1ME3A LINE L1 5177 5458 -747 272 292 146 18 chr5 77144214 77144495 -122485655 + L1ME3A LINE L1 5637 5953 -217 2135 120 3 13 chr5 77144510 77144809 -122485341 + AluSx SINE Alu 1 296 -16 627 98 22 55 chr5 77145355 77145538 -122484612 + (TCTCCC)n Simple_repeat Simple_repeat 1 177 0 3425 42 21 23 chr5 77145543 77146020 -122484130 + SVA Other Other 2 477 -909 29342 52 4 2 chr5 77146120 77150855 -122479295 + L1PA5 LINE L1 1406 6151 -3 27 0 0 0 chr5 77150863 77150890 -122479260 + AT_rich Low_complexity Low_complexity 1 27 0 183 80 0 0 chr5 77151683 77151708 -122478442 + (A)n Simple_repeat Simple_repeat 1 25 0 214 260 13 26 chr5 77152139 77152216 -122477934 + GA-rich Low_complexity Low_complexity 2 77 0 492 294 43 95 chr5 77153228 77153670 -122476480 + HAL1 LINE L1 45 463 -2044 1200 141 5 0 chr5 77153718 77153902 -122476248 + AluSq SINE Alu 115 299 -14 893 90 8 0 chr5 77153902 77154035 -122476115 + (GGAA)n Simple_repeat Simple_repeat 3 136 0 315 298 36 12 chr5 77154098 77154182 -122475968 + MER5A DNA MER1_type 12 97 -92 1574 256 98 16 chr5 77154183 77154675 -122475475 + MLT1E LTR MaLR 3 534 -59 634 132 0 47 chr5 77154680 77154786 -122475364 + MER5A DNA MER1_type 89 189 0 618 181 134 0 chr5 77155161 77155288 -122474862 + AluJo SINE Alu 1 144 -168 957 191 33 23 chr5 77155315 77155530 -122474620 + AluJo SINE Alu 85 301 -11 449 209 52 46 chr5 77155755 77155908 -122474242 - HAL1 LINE L1 -965 1542 1389 270 241 74 0 chr5 77156014 77156122 -122474028 - HAL1 LINE L1 -1287 1220 1105 385 241 48 106 chr5 77156233 77156544 -122473606 - HAL1 LINE L1 -1549 958 666 1337 234 117 37 chr5 77156630 77157092 -122473058 - MLT1D LTR MaLR -6 499 1 6808 52 17 11 chr5 77158189 77159463 -122470687 + L1PA7 LINE L1 4878 6154 0 23 0 0 0 chr5 77162696 77162719 -122467431 + AT_rich Low_complexity Low_complexity 1 23 0 591 281 51 25 chr5 77163277 77163512 -122466638 + MIR SINE MIR 22 262 0 380 259 81 96 chr5 77163768 77163965 -122466185 - MIR SINE MIR -19 243 50 2527 102 33 3 chr5 77165023 77165387 -122464763 + THE1C LTR MaLR 1 375 0 189 0 0 0 chr5 77165690 77165711 -122464439 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 594 244 92 65 chr5 77166349 77166566 -122463584 - L2 LINE L2 -4 3309 3087 1743 211 124 27 chr5 77166631 77167105 -122463045 + MLT1F1 LTR MaLR 48 567 0 599 294 27 15 chr5 77167115 77167381 -122462769 - L2 LINE L2 -229 3084 2723 24 53 0 0 chr5 77167825 77167863 -122462287 + AT_rich Low_complexity Low_complexity 1 38 0 279 244 0 0 chr5 77168273 77168396 -122461754 + GA-rich Low_complexity Low_complexity 1 123 0 180 366 24 0 chr5 77168717 77168799 -122461351 + L2 LINE L2 3108 3191 -81 200 108 0 27 chr5 77168976 77169013 -122461137 + (TATG)n Simple_repeat Simple_repeat 2 37 0 574 249 37 55 chr5 77169019 77169236 -122460914 - L1MC4a LINE L1 -1878 5930 5718 2094 131 10 0 chr5 77169628 77169919 -122460231 - AluSx SINE Alu -18 294 1 1436 232 77 59 chr5 77170182 77170677 -122459473 + MLT1D LTR MaLR 2 505 0 2970 195 71 75 chr5 77170677 77171555 -122458595 + MLT1D-int LTR MaLR 1 874 -497 430 237 16 79 chr5 77171634 77171824 -122458326 + L1M4b LINE L1 1036 1213 -5646 2315 219 61 37 chr5 77172082 77172211 -122457939 + L1M4b LINE L1 1223 1348 -5790 1611 174 10 53 chr5 77172211 77172510 -122457640 + AluJo SINE Alu 1 286 -26 2315 219 61 37 chr5 77172510 77173667 -122456483 + L1M4b LINE L1 1348 2687 -4451 642 253 93 31 chr5 77173872 77174385 -122455765 + L1M4b LINE L1 2642 3143 -3814 1869 139 41 46 chr5 77174385 77174751 -122455399 + THE1B LTR MaLR 1 364 0 12309 83 0 4 chr5 77174751 77176337 -122453813 + THE1B-int LTR MaLR 1 1580 0 823 115 8 15 chr5 77176341 77176471 -122453679 + THE1B LTR MaLR 5 133 -242 465 250 92 0 chr5 77176476 77176628 -122453522 - L1MC4a LINE L1 -1084 6724 6559 358 151 137 0 chr5 77176883 77176956 -122453194 - Tigger4(Zombi) DNA MER2_type 0 2731 2649 2293 159 65 2 chr5 77176957 77177373 -122452777 - Tigger4(Zombi) DNA MER2_type -2289 442 1 2435 204 94 8 chr5 77177605 77178125 -122452025 + MLT1F1 LTR MaLR 3 567 0 403 158 0 12 chr5 77178890 77178972 -122451178 + Tigger4(Zombi) DNA MER2_type 2651 2731 0 433 295 100 32 chr5 77178973 77179373 -122450777 + L1MC4a LINE L1 6298 6724 -1084 738 254 53 39 chr5 77179375 77179809 -122450341 + L1MC5 LINE L1 7343 7782 -179 1943 160 0 6 chr5 77179902 77180214 -122449936 + AluSx SINE Alu 1 310 -2 588 322 59 27 chr5 77180243 77180616 -122449534 - L3 LINE CR1 -1010 567 183 1149 172 54 24 chr5 77180620 77180916 -122449234 - L1MB8 LINE L1 0 6178 5874 208 116 0 47 chr5 77181794 77181837 -122448313 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 611 195 13 63 chr5 77183541 77183700 -122446450 - MER20 DNA MER1_type -68 151 1 2832 237 77 77 chr5 77183744 77184217 -122445933 + L1MEc LINE L1 1768 2240 -3975 1245 142 0 0 chr5 77184217 77184421 -122445729 - L1PA16 LINE L1 -3 6163 5960 2832 237 77 77 chr5 77184421 77186120 -122444030 + L1MEc LINE L1 2240 4049 -2166 16272 66 7 2 chr5 77186120 77189103 -122441047 + L1PA6 LINE L1 3157 6151 -3 2832 237 77 77 chr5 77189103 77189180 -122440970 + L1MEc LINE L1 4049 4125 -2090 415 221 9 9 chr5 77189175 77189288 -122440862 + L1ME2 LINE L1 5926 6038 -126 * 248 227 30 0 chr5 77189289 77189355 -122440795 + L1ME2 LINE L1 6086 6153 -11 324 48 0 0 chr5 77189359 77189401 -122440749 + (CA)n Simple_repeat Simple_repeat 2 43 0 41682 46 1 1 chr5 77189459 77195166 -122434984 + L1P2 LINE L1 2 5714 -441 12988 43 4 45 chr5 77195283 77197420 -122432730 - L1P LINE L1 -2443 3703 1654 414 317 82 34 chr5 77197626 77197919 -122432231 - L1M4 LINE L1 -1224 4922 4616 636 117 0 0 chr5 77197932 77198026 -122432124 - AluSg/x SINE Alu -8 301 208 331 309 65 16 chr5 77198601 77198724 -122431426 + L1ME LINE L1 322 450 -5620 24 0 0 0 chr5 77199466 77199490 -122430660 + AT_rich Low_complexity Low_complexity 1 24 0 518 223 69 0 chr5 77200127 77200302 -122429848 - L1MC5 LINE L1 -852 7109 6923 1655 171 17 13 chr5 77200647 77200946 -122429204 + AluJo SINE Alu 1 300 -12 338 216 0 31 chr5 77201159 77201256 -122428894 - FLAM_A SINE Alu -36 97 4 2246 225 68 56 chr5 77201412 77202266 -122427884 - MER6 DNA MER2_type 0 865 2 23 0 0 0 chr5 77202751 77202774 -122427376 + AT_rich Low_complexity Low_complexity 1 23 0 2185 96 3 3 chr5 77202901 77203193 -122426957 - AluSp SINE Alu -21 292 1 1711 131 78 11 chr5 77203622 77203905 -122426245 + AluJo SINE Alu 5 306 -6 2021 130 0 7 chr5 77204157 77204480 -122425670 - AluSq SINE Alu 0 321 1 3342 160 19 68 chr5 77204644 77205370 -122424780 - LTR8 LTR ERV1 0 691 1 598 271 18 78 chr5 77206163 77206389 -122423761 + L1ME LINE L1 5388 5595 -526 2145 129 7 0 chr5 77206389 77206683 -122423467 + AluSx SINE Alu 1 296 -16 598 271 18 78 chr5 77206683 77206737 -122423413 + L1ME LINE L1 5595 5651 -470 242 122 0 0 chr5 77207199 77207240 -122422910 - L1ME1 LINE L1 0 6166 6126 * 310 175 0 0 chr5 77207207 77207270 -122422880 - L1ME2 LINE L1 -9 6155 6093 237 33 0 0 chr5 77207681 77207711 -122422439 + (CA)n Simple_repeat Simple_repeat 2 31 0 2434 215 39 20 chr5 77207801 77208520 -122421630 - L1ME2 LINE L1 -235 5929 5193 1666 167 13 49 chr5 77208520 77208825 -122421325 - AluJb SINE Alu -18 294 1 2434 215 39 20 chr5 77208825 77208912 -122421238 - L1ME2 LINE L1 -971 5193 5109 1776 194 19 51 chr5 77208913 77208982 -122421168 - MLT1C LTR MaLR -1 466 396 2123 121 3 16 chr5 77208982 77209288 -122420862 - AluSc SINE Alu -6 303 2 1776 194 19 51 chr5 77209288 77209630 -122420520 - MLT1C LTR MaLR -71 396 68 2356 90 3 0 chr5 77209630 77209931 -122420219 - AluSp SINE Alu -11 302 1 2188 120 0 16 chr5 77209931 77210239 -122419911 - AluSx SINE Alu -8 304 1 596 246 31 36 chr5 77210308 77210532 -122419618 - L1ME2 LINE L1 -1033 5113 4891 11749 110 18 33 chr5 77210533 77212668 -122417482 + L1P3 LINE L1 1 2157 -4304 24200 58 5 7 chr5 77212679 77216742 -122413408 - L1PA4 LINE L1 -3 6152 2102 654 65 0 11 chr5 77266751 77266844 -122363306 + L1M1 LINE L1 2823 2914 -4651 521 144 21 10 chr5 77266844 77266941 -122363209 + MER4A LTR ERV1 1 98 -566 1708 153 3 43 chr5 77266941 77266980 -122363170 + MER4A LTR ERV1 261 300 -364 2176 68 43 0 chr5 77266980 77267259 -122362891 + AluY SINE Alu 1 291 -20 1708 153 3 43 chr5 77267259 77267579 -122362571 + MER4A LTR ERV1 300 664 0 2151 97 134 20 chr5 77267582 77267874 -122362276 + MER4A-int LTR ERV1 1 258 -6340 219 36 0 0 chr5 77267874 77267902 -122362248 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2151 97 134 20 chr5 77267902 77268241 -122361909 + MER4A-int LTR ERV1 258 825 -5773 255 148 74 37 chr5 77268310 77268364 -122361786 + LTR49 LTR ERV1 258 313 -282 1068 115 125 0 chr5 77268383 77268591 -122361559 + MER4A-int LTR ERV1 993 1226 -5372 378 0 0 0 chr5 77268591 77268633 -122361517 + (T)n Simple_repeat Simple_repeat 1 42 0 1617 148 12 4 chr5 77268666 77268923 -122361227 - AluSq SINE Alu -11 302 44 24846 99 13 6 chr5 77268985 77269529 -122360621 - L1P3 LINE L1 -967 5494 4955 2106 133 0 13 chr5 77269529 77269837 -122360313 - AluSg SINE Alu -6 304 1 24846 99 13 6 chr5 77269837 77273180 -122356970 - L1P3 LINE L1 -1506 4955 1581 2941 124 30 81 chr5 77273188 77273818 -122356332 - LTR14B LTR ERVK 0 608 11 10724 102 12 3 chr5 77273818 77275379 -122354771 - L1P3 LINE L1 -4881 1580 5 3794 112 66 34 chr5 77275379 77276122 -122354028 + MER4A-int LTR ERV1 1472 2238 -4360 2214 73 70 23 chr5 77276109 77276248 -122353902 + MER4-int LTR ERV1 2093 2224 -4374 * 2262 109 3 0 chr5 77276248 77276542 -122353608 + AluSp SINE Alu 1 295 -18 2214 73 70 23 chr5 77276542 77276787 -122353363 + MER4-int LTR ERV1 2224 2495 -4103 1236 151 71 4 chr5 77276787 77277025 -122353125 - LTR8 LTR ERV1 -434 257 4 3842 133 65 37 chr5 77277027 77277947 -122352203 + MER4A-int LTR ERV1 2736 3681 -2917 * 11250 100 51 24 chr5 77277946 77278083 -122352067 + MER4A-int LTR ERV1 3837 3969 -2629 1781 139 10 30 chr5 77278083 77278378 -122351772 + AluSx SINE Alu 1 289 -23 11250 100 51 24 chr5 77278378 77280851 -122349299 + MER4A-int LTR ERV1 3969 6596 -2 564 115 31 10 chr5 77280860 77280956 -122349194 + MER4A LTR ERV1 1 98 -566 1724 138 9 19 chr5 77280956 77281305 -122348845 + MER4A LTR ERV1 261 664 0 3619 121 68 25 chr5 77281307 77282032 -122348118 + L1M1 LINE L1 2913 3668 -3897 310 325 191 5 chr5 77282268 77282477 -122347673 + MIR SINE MIR 3 250 -12 471 216 45 20 chr5 77282680 77282879 -122347271 - L1MC/D LINE L1 -2340 5468 5265 2046 133 13 3 chr5 77283135 77283437 -122346713 + AluSx SINE Alu 1 305 -7 723 91 27 9 chr5 77283688 77283798 -122346352 - L1PA16 LINE L1 -9 6157 6046 2000 194 79 3 chr5 77283852 77284233 -122345917 + MER83B-int LTR ERV1 317 726 -4154 518 81 0 0 chr5 77284244 77284318 -122345832 - Alu SINE Alu -1 310 237 2671 51 0 0 chr5 77284340 77284651 -122345499 - AluY SINE Alu 0 311 1 5012 133 17 10 chr5 77284651 77286123 -122344027 + MER83B-int LTR ERV1 712 4253 -627 3545 86 59 4 chr5 77286123 77286613 -122343537 + LTR17 LTR ERV1 256 772 -8 5408 82 1 17 chr5 77286626 77287324 -122342826 + HERV17 LTR ERV1 1 687 -7939 4658 74 20 0 chr5 77287489 77288097 -122342053 + HERV17 LTR ERV1 798 1417 -7209 560 147 0 11 chr5 77288097 77288192 -122341958 + MER83B LTR ERV1 285 378 0 180 0 0 0 chr5 77288247 77288267 -122341883 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1443 114 65 46 chr5 77288563 77288826 -122341324 + MER65A LTR ERV1 178 445 0 281 311 72 49 chr5 77288897 77289286 -122340864 - L1MC/D LINE L1 -1231 4915 4518 1548 177 0 0 chr5 77289623 77289877 -122340273 - AluJb SINE Alu -4 308 55 1866 123 67 21 chr5 77289913 77290198 -122339952 + AluY SINE Alu 2 299 -12 302 295 168 0 chr5 77291463 77291558 -122338592 + L2 LINE L2 3148 3258 -14 186 43 0 0 chr5 77291559 77291582 -122338568 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 194 33 67 0 chr5 77291817 77291847 -122338303 + T-rich Low_complexity Low_complexity 2 33 0 886 192 0 0 chr5 77291850 77291996 -122338154 - FRAM SINE Alu -30 146 1 1742 160 32 0 chr5 77292230 77292511 -122337639 - AluJb SINE Alu -22 290 1 362 233 22 22 chr5 77292589 77292679 -122337471 - MIR SINE MIR -75 133 44 241 314 161 8 chr5 77293210 77293334 -122336816 + MIR3 SINE MIR 41 183 -25 21 0 0 0 chr5 77293791 77293812 -122336338 + AT_rich Low_complexity Low_complexity 1 21 0 405 248 52 46 chr5 77293812 77293965 -122336185 - L1ME4a LINE L1 -2 6119 5966 2342 87 0 7 chr5 77294211 77294511 -122335639 + AluSx SINE Alu 1 298 -14 1132 255 74 86 chr5 77294520 77295107 -122335043 - L1MCc LINE L1 -3604 3337 2744 1684 173 60 0 chr5 77295107 77295390 -122334760 - AluSx SINE Alu -12 300 1 1132 255 74 86 chr5 77295390 77295417 -122334733 - L1MCc LINE L1 -4197 2744 2718 2127 117 3 0 chr5 77295417 77295708 -122334442 - AluSq SINE Alu -21 292 1 1132 255 74 86 chr5 77295708 77296118 -122334032 - L1MCc LINE L1 -4223 2718 2366 802 123 0 0 chr5 77296119 77296225 -122333925 + AluSq/x SINE Alu 2 107 -205 2245 105 3 0 chr5 77296563 77296857 -122333293 - AluSc SINE Alu -14 295 1 385 283 116 44 chr5 77296885 77297502 -122332648 - L1MCc LINE L1 -4909 1514 1183 1143 146 17 100 chr5 77297937 77298176 -122331974 + MER20 DNA MER1_type 1 219 0 2553 36 0 7 chr5 77298736 77299037 -122331113 - AluY SINE Alu -12 299 1 1743 163 58 0 chr5 77299388 77299547 -122330603 - AluJo SINE Alu -19 293 110 1034 104 0 6 chr5 77299547 77299711 -122330439 + (TTTC)n Simple_repeat Simple_repeat 2 164 0 1743 163 58 0 chr5 77299711 77299828 -122330322 - AluJo SINE Alu -202 110 1 1204 43 0 0 chr5 77299874 77300012 -122330138 + LTR66 LTR ERVL 1 138 -472 2061 72 115 0 chr5 77300112 77300391 -122329759 + LTR66 LTR ERVL 300 610 0 630 204 0 0 chr5 77300391 77300489 -122329661 - AluJ/FLAM SINE Alu -214 98 1 2280 109 0 3 chr5 77300739 77301043 -122329107 - AluSx SINE Alu -9 303 1 476 261 70 0 chr5 77302646 77302788 -122327362 - MER21B LTR ERV1 -51 812 661 613 201 43 7 chr5 77302793 77302932 -122327218 - LTR36 LTR ERV1 0 611 468 1409 150 5 5 chr5 77302937 77303157 -122326993 + AluJb SINE Alu 5 224 -88 1737 111 4 30 chr5 77303332 77303602 -122326548 - AluSx SINE Alu -4 308 46 957 123 0 0 chr5 77303702 77303824 -122326326 - AluSq/x SINE Alu -190 122 1 349 252 106 83 chr5 77303828 77304082 -122326068 - LTR38 LTR ERV1 -208 348 89 2305 106 0 3 chr5 77304114 77304416 -122325734 + AluSx SINE Alu 1 301 -11 2498 240 55 35 chr5 77304491 77305054 -122325096 - MER21B LTR ERV1 -197 666 87 1556 177 16 43 chr5 77305054 77305178 -122324972 + AluJb SINE Alu 1 127 -185 2069 123 0 30 chr5 77305178 77305479 -122324671 - AluSx SINE Alu -20 292 1 1556 177 16 43 chr5 77305479 77305659 -122324491 + AluJb SINE Alu 127 297 -15 2498 240 55 35 chr5 77305659 77305748 -122324402 - MER21B LTR ERV1 -776 87 1 475 318 128 26 chr5 77306362 77306705 -122323445 + MLT1J LTR MaLR 98 475 -36 249 291 62 49 chr5 77307188 77307375 -122322775 + L1M4 LINE L1 4940 5134 -1012 2391 82 0 0 chr5 77307375 77307669 -122322481 - AluY SINE Alu -17 294 1 249 291 62 49 chr5 77307669 77307787 -122322363 + L1M4 LINE L1 5134 5249 -897 224 167 56 0 chr5 77307894 77307948 -122322202 + T-rich Low_complexity Low_complexity 2 58 0 1643 138 0 4 chr5 77307969 77308200 -122321950 - AluSq SINE Alu -83 230 1 707 292 52 23 chr5 77309229 77309537 -122320613 + LTR16C LTR ERVL 175 491 0 2293 86 10 0 chr5 77309577 77309867 -122320283 + AluSg SINE Alu 1 293 -17 220 229 0 0 chr5 77310462 77310510 -122319640 + (TA)n Simple_repeat Simple_repeat 2 49 0 1085 253 93 49 chr5 77311523 77311655 -122318495 + MLT1J LTR MaLR 70 195 -316 258 56 0 0 chr5 77311655 77311691 -122318459 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1085 253 93 49 chr5 77311691 77311966 -122318184 + MLT1J LTR MaLR 195 495 -16 1623 72 14 14 chr5 77312296 77312505 -122317645 + AluSq SINE Alu 1 209 -104 3213 65 82 0 chr5 77312606 77313023 -122317127 + LTR66 LTR ERVL 160 610 0 630 204 0 0 chr5 77313023 77313121 -122317029 - AluJ/FLAM SINE Alu -214 98 1 2147 109 0 16 chr5 77313371 77313675 -122316475 - AluSx SINE Alu -9 303 5 721 288 37 8 chr5 77314819 77315062 -122315088 + MIR SINE MIR 13 262 0 1645 120 4 66 chr5 77315237 77315370 -122314780 + AluSx SINE Alu 4 144 -168 2355 63 0 17 chr5 77315370 77315671 -122314479 + AluY SINE Alu 1 296 -15 417 39 0 0 chr5 77315681 77315732 -122314418 + (CA)n Simple_repeat Simple_repeat 2 52 0 1645 120 4 66 chr5 77315732 77315846 -122314304 + AluSx SINE Alu 153 246 -66 4808 150 63 38 chr5 77315846 77316931 -122313219 + pTR5 LTR ERV1 745 2025 -413 311 245 31 20 chr5 77316931 77317029 -122313121 + LTR30 LTR ERV1 544 642 -80 2151 131 3 3 chr5 77317029 77317358 -122312792 + pTR5 LTR ERV1 66 394 -2044 22 35 0 0 chr5 77317385 77317414 -122312736 + AT_rich Low_complexity Low_complexity 1 29 0 180 111 0 0 chr5 77317862 77317889 -122312261 + (T)n Simple_repeat Simple_repeat 1 27 0 374 310 21 78 chr5 77317932 77318074 -122312076 + L2 LINE L2 3138 3271 -1 324 282 111 34 chr5 77318090 77318281 -122311869 + MIR SINE MIR 8 214 -48 209 351 84 21 chr5 77318767 77318958 -122311192 - L2 LINE L2 -640 2674 2472 343 286 79 121 chr5 77319541 77320159 -122309991 - L1M2 LINE L1 -5501 1348 757 379 198 12 25 chr5 77321027 77321108 -122309042 + MER116 DNA Mariner 1 80 0 187 250 0 0 chr5 77321205 77321241 -122308909 - MIR SINE MIR -141 67 32 180 111 0 0 chr5 77321251 77321278 -122308872 + (T)n Simple_repeat Simple_repeat 1 27 0 2862 0 0 0 chr5 77321647 77321949 -122308201 + AluYa5 SINE Alu 1 302 -9 1557 158 8 0 chr5 77322801 77323035 -122307115 + MER46A DNA MER2_type 1 236 0 503 254 12 77 chr5 77323359 77323607 -122306543 + MER112 DNA MER1_type 17 248 -12 1718 169 10 30 chr5 77325379 77325519 -122304631 + AluJo SINE Alu 1 142 -170 2364 63 0 17 chr5 77325519 77325819 -122304331 + AluY SINE Alu 1 295 -16 1718 169 10 30 chr5 77325819 77325979 -122304171 + AluJo SINE Alu 142 295 -17 587 246 107 63 chr5 77326818 77326951 -122303199 - L1ME4a LINE L1 -112 6009 5883 2256 111 0 0 chr5 77326951 77327248 -122302902 - AluSq SINE Alu -16 297 1 587 246 107 63 chr5 77327248 77327574 -122302576 - L1ME4a LINE L1 -238 5883 5530 21 57 0 0 chr5 77327698 77327733 -122302417 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr5 77328356 77328376 -122301774 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 1952 148 0 0 chr5 77328376 77328659 -122301491 - AluSx SINE Alu -29 283 1 2204 91 3 24 chr5 77329071 77329369 -122300781 + AluSq SINE Alu 1 292 -21 21 0 0 0 chr5 77329764 77329785 -122300365 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 77330502 77330526 -122299624 + AT_rich Low_complexity Low_complexity 1 24 0 374 208 61 0 chr5 77330556 77330660 -122299490 - L1ME1 LINE L1 0 6164 6052 254 227 13 27 chr5 77331614 77331689 -122298461 + MIR3 SINE MIR 130 203 -5 484 335 43 22 chr5 77334018 77334248 -122295902 - MIR SINE MIR -8 254 20 252 61 0 0 chr5 77334559 77334592 -122295558 - L1MA9 LINE L1 0 6312 6280 299 25 25 0 chr5 77334595 77334635 -122295515 + (TTA)n Simple_repeat Simple_repeat 2 42 0 2064 123 0 7 chr5 77334638 77334922 -122295228 - AluSx SINE Alu -30 282 1 201 121 0 0 chr5 77335437 77335470 -122294680 + (TG)n Simple_repeat Simple_repeat 2 34 0 678 214 70 19 chr5 77335486 77335799 -122294351 + L1MB2 LINE L1 5190 5520 -785 2363 91 3 0 chr5 77335819 77336128 -122294022 - AluSp SINE Alu -1 312 3 30 27 0 0 chr5 77336185 77336222 -122293928 + AT_rich Low_complexity Low_complexity 1 37 0 243 268 0 0 chr5 77336256 77336312 -122293838 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 2284 98 0 3 chr5 77338332 77338639 -122291511 + AluSx SINE Alu 1 306 -6 1033 222 0 5 chr5 77339040 77339238 -122290912 + AluJo SINE Alu 24 220 -92 216 158 0 0 chr5 77339267 77339305 -122290845 + (TCCG)n Simple_repeat Simple_repeat 3 40 0 265 267 0 0 chr5 77339307 77339382 -122290768 + Tigger5 DNA MER2_type 2249 2323 0 2463 149 10 51 chr5 77339404 77339914 -122290236 + L1MB2 LINE L1 5573 6061 -110 3090 68 9 2 chr5 77339915 77340344 -122289806 + L1PA8 LINE L1 5721 6152 -20 477 146 146 0 chr5 77340344 77340447 -122289703 + L1MB2 LINE L1 6050 6167 -4 29 0 0 0 chr5 77341359 77341388 -122288762 + AT_rich Low_complexity Low_complexity 1 29 0 383 235 147 0 chr5 77345584 77345720 -122284430 - MER5A DNA MER1_type -2 187 32 363 23 0 0 chr5 77346331 77346375 -122283775 + (TG)n Simple_repeat Simple_repeat 2 45 0 1817 122 36 16 chr5 77346889 77347192 -122282958 - MER1B DNA MER1_type 0 339 31 1548 111 10 5 chr5 77347380 77347587 -122282563 - AluSg/x SINE Alu -19 291 84 34 72 0 0 chr5 77347600 77347669 -122282481 + AT_rich Low_complexity Low_complexity 1 69 0 193 150 33 117 chr5 77347709 77347769 -122282381 + L2 LINE L2 3144 3198 -74 522 261 56 12 chr5 77347888 77348049 -122282101 + MIR3 SINE MIR 30 197 -11 2215 93 14 0 chr5 77348727 77349016 -122281134 + AluSp SINE Alu 5 297 -16 1936 119 14 4 chr5 77349046 77349323 -122280827 + AluSx SINE Alu 14 293 -19 2507 76 0 0 chr5 77350337 77350638 -122279512 - AluSg SINE Alu -7 303 3 210 152 0 0 chr5 77350737 77350770 -122279380 + L2 LINE L2 3269 3301 -12 311 175 0 18 chr5 77351229 77351286 -122278864 - Tigger5 DNA MER2_type -5 2318 2263 367 213 0 0 chr5 77351306 77351381 -122278769 - Tigger5 DNA MER2_type 0 2323 2249 2105 124 0 10 chr5 77351382 77351680 -122278470 - AluSx SINE Alu -17 295 1 362 211 0 0 chr5 77351682 77351753 -122278397 + Tigger5 DNA MER2_type 2242 2312 -11 234 203 145 0 chr5 77351758 77351827 -122278323 - Tigger5 DNA MER2_type -2244 79 1 320 287 87 0 chr5 77352971 77353121 -122277029 + MER112 DNA MER1_type 7 169 -91 2314 111 0 0 chr5 77353134 77353440 -122276710 + AluSx SINE Alu 1 306 -6 201 171 0 0 chr5 77356659 77356694 -122273456 + A-rich Low_complexity Low_complexity 1 35 0 1674 164 18 7 chr5 77357767 77358111 -122272039 + AluJb SINE Alu 1 347 0 30 0 0 0 chr5 77358111 77358141 -122272009 + AT_rich Low_complexity Low_complexity 1 30 0 972 275 98 28 chr5 77359586 77360156 -122269994 + L1MC4a LINE L1 5359 5968 -1840 1416 183 67 14 chr5 77360264 77360549 -122269601 - AluJo SINE Alu -2 300 1 2190 102 0 0 chr5 77360606 77360891 -122269259 + AluSq SINE Alu 1 285 -28 287 250 120 38 chr5 77360925 77361109 -122269041 + L1MC4a LINE L1 5684 5882 -1926 1735 166 7 18 chr5 77361365 77361678 -122268472 + AluJo SINE Alu 1 310 0 2234 92 7 0 chr5 77362057 77362350 -122267800 - AluSc SINE Alu -14 295 1 2262 81 30 3 chr5 77362975 77363272 -122266878 + AluSg1 SINE Alu 1 305 -4 234 341 32 56 chr5 77363286 77363412 -122266738 - MER5B DNA MER1_type -34 144 22 1147 139 14 79 chr5 77363834 77364050 -122266100 - AluJo SINE Alu -22 290 89 811 188 48 0 chr5 77364749 77364935 -122265215 - L1MB4 LINE L1 0 6180 5986 421 201 60 15 chr5 77365542 77365676 -122264474 + L1MB4 LINE L1 5961 6100 -80 23 33 0 0 chr5 77365770 77365800 -122264350 + AT_rich Low_complexity Low_complexity 1 30 0 721 176 0 17 chr5 77366732 77366851 -122263299 + FLAM_A SINE Alu 11 127 -15 2190 126 0 0 chr5 77367660 77367954 -122262196 + AluSq SINE Alu 1 294 -19 327 329 49 44 chr5 77368011 77368214 -122261936 + MIR SINE MIR 20 221 -41 26 50 0 0 chr5 77368321 77368361 -122261789 + AT_rich Low_complexity Low_complexity 1 40 0 470 263 25 8 chr5 77368835 77368953 -122261197 + L2 LINE L2 3191 3310 -3 25 0 0 0 chr5 77369033 77369058 -122261092 + AT_rich Low_complexity Low_complexity 1 25 0 2334 86 0 3 chr5 77369338 77369630 -122260520 - AluSq SINE Alu -14 299 9 2372 102 0 0 chr5 77369929 77370234 -122259916 + AluSq SINE Alu 1 305 -8 342 0 0 0 chr5 77371069 77371107 -122259043 + (TA)n Simple_repeat Simple_repeat 2 39 0 1716 166 7 4 chr5 77371112 77371390 -122258760 - AluJb SINE Alu -33 279 1 31 58 0 0 chr5 77372887 77372939 -122257211 + AT_rich Low_complexity Low_complexity 1 52 0 848 214 14 0 chr5 77373288 77373428 -122256722 - FRAM SINE Alu -30 146 5 1438 163 37 8 chr5 77373433 77373679 -122256471 - AluJo SINE Alu -17 295 43 2397 87 0 3 chr5 77375152 77375462 -122254688 + AluY SINE Alu 1 309 -2 600 180 107 25 chr5 77375961 77376113 -122254037 + FLAM_C SINE Alu 2 163 0 2032 116 0 7 chr5 77376169 77376461 -122253689 + AluSc SINE Alu 1 290 -19 1511 129 70 52 chr5 77376731 77377003 -122253147 + AluJo SINE Alu 21 297 -15 1247 162 4 38 chr5 77377006 77377241 -122252909 + AluJb SINE Alu 86 312 0 431 235 0 0 chr5 77377247 77377349 -122252801 + L1ME LINE L1 5598 5699 -422 1149 128 39 81 chr5 77377831 77378065 -122252085 + AluJo SINE Alu 85 308 -4 2211 100 40 10 chr5 77378066 77378401 -122251749 + AluSx SINE Alu 2 345 0 2410 89 0 9 chr5 77378930 77379246 -122250904 + AluSq SINE Alu 1 313 0 2331 100 0 7 chr5 77380225 77380534 -122249616 + AluSg SINE Alu 1 307 -3 229 272 120 6 chr5 77380860 77380989 -122249161 - MIR SINE MIR -10 252 30 2049 117 18 0 chr5 77382343 77382625 -122247525 + AluSc SINE Alu 1 287 -22 489 331 54 0 chr5 77383823 77383989 -122246161 - MIR3 SINE MIR -14 194 20 2222 83 0 24 chr5 77385011 77385301 -122244849 + AluSg SINE Alu 13 295 -15 1072 190 117 8 chr5 77385797 77386044 -122244106 + MER58 DNA MER1_type 1 274 -2146 328 359 0 16 chr5 77386230 77386358 -122243792 - MER5A DNA MER1_type -29 160 35 207 0 0 0 chr5 77386778 77386801 -122243349 + (A)n Simple_repeat Simple_repeat 1 23 0 1531 173 10 31 chr5 77387213 77387528 -122242622 + AluSx SINE Alu 1 309 0 292 329 216 6 chr5 77387677 77388033 -122242117 + L2 LINE L2 1946 2376 -938 850 142 115 111 chr5 77388163 77388416 -122241734 + Tigger7 DNA MER2_type 2238 2491 0 285 407 51 0 chr5 77388434 77388611 -122241539 + L2 LINE L2 2556 2741 -573 202 361 0 14 chr5 77388953 77389025 -122241125 + L2 LINE L2 3212 3282 -31 2103 113 3 17 chr5 77389027 77389329 -122240821 - AluSx SINE Alu -14 298 1 22 56 0 0 chr5 77389785 77389821 -122240329 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 77389948 77389970 -122240180 + AT_rich Low_complexity Low_complexity 1 22 0 194 133 0 22 chr5 77390013 77390058 -122240092 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 609 78 0 0 chr5 77390093 77390170 -122239980 + L1PA15 LINE L1 5806 5882 -283 4222 67 76 69 chr5 77390170 77390369 -122239781 + PABL_A LTR ERV1 1 197 -463 840 153 23 28 chr5 77390369 77390546 -122239604 - L1MB2 LINE L1 0 6171 5996 4222 67 76 69 chr5 77390546 77391001 -122239149 + PABL_A LTR ERV1 197 660 0 1231 186 37 15 chr5 77391004 77391273 -122238877 + L1PB4 LINE L1 5882 6156 0 26 0 0 0 chr5 77391582 77391608 -122238542 + AT_rich Low_complexity Low_complexity 1 26 0 2263 80 0 7 chr5 77392019 77392305 -122237845 - AluSg SINE Alu -20 290 7 1515 131 120 26 chr5 77392316 77392583 -122237567 - AluJo SINE Alu -14 298 7 2499 40 0 3 chr5 77392812 77393109 -122237041 + AluY SINE Alu 1 296 -15 21 36 0 0 chr5 77393385 77393413 -122236737 + AT_rich Low_complexity Low_complexity 1 28 0 210 37 0 0 chr5 77393785 77393812 -122236338 + (TATG)n Simple_repeat Simple_repeat 2 28 0 2204 102 0 0 chr5 77393812 77394097 -122236053 - AluSg SINE Alu -25 285 1 277 279 163 12 chr5 77394746 77394832 -122235318 + MER94 DNA DNA 35 133 -1 3783 121 92 10 chr5 77394977 77395670 -122234480 - Tigger3(Golem) DNA MER2_type -2 3027 2278 681 167 0 0 chr5 77395661 77395769 -122234381 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 983 211 0 6 chr5 77395948 77396119 -122234031 + FAM SINE Alu 1 170 -5 243 61 0 0 chr5 77396154 77396187 -122233963 + (CA)n Simple_repeat Simple_repeat 2 34 0 2234 217 69 40 chr5 77396244 77396899 -122233251 + L1ME3 LINE L1 5483 6156 -6 271 309 106 0 chr5 77397290 77397384 -122232766 + L2 LINE L2 3144 3247 -25 198 0 0 0 chr5 77397524 77397546 -122232604 + (CA)n Simple_repeat Simple_repeat 2 23 0 269 284 11 21 chr5 77397592 77397687 -122232463 + (CATA)n Simple_repeat Simple_repeat 2 95 0 420 176 33 33 chr5 77398686 77398777 -122231373 + MIR3 SINE MIR 112 202 -6 307 229 0 24 chr5 77449179 77449262 -122180888 - L1 LINE L1 -987 5341 5261 723 179 8 0 chr5 77449262 77449385 -122180765 + AluJ SINE Alu 1 124 -188 223 111 0 111 chr5 77449399 77449471 -122180679 + (TAAAAA)n Simple_repeat Simple_repeat 1 64 0 952 220 0 0 chr5 77449472 77449649 -122180501 + AluJ SINE Alu 130 306 -6 13120 183 35 21 chr5 77449650 77451131 -122179019 - L1 LINE L1 -1057 5271 3813 180 0 0 0 chr5 77451131 77451151 -122178999 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 13120 183 35 21 chr5 77451151 77451823 -122178327 - L1 LINE L1 -2515 3813 3152 1279 217 76 4 chr5 77451823 77452086 -122178064 - AluJo SINE Alu -30 282 1 13120 183 35 21 chr5 77452086 77453347 -122176803 - L1 LINE L1 -3176 3152 1911 1515 217 7 19 chr5 77453347 77453656 -122176494 - AluJo SINE Alu -4 308 4 13120 183 35 21 chr5 77453656 77455432 -122174718 - L1 LINE L1 -4417 1911 10 1504 212 110 16 chr5 77455442 77455941 -122174209 - Looper DNA T2_type -1005 553 8 2341 95 3 0 chr5 77456809 77457115 -122173035 + AluSx SINE Alu 1 307 -5 1894 267 91 30 chr5 77457521 77458800 -122171350 + L1ME LINE L1 2 1487 -4593 458 302 115 25 chr5 77458809 77459044 -122171106 + MIR SINE MIR 7 262 0 235 105 0 0 chr5 77459171 77459209 -122170941 + AluSx SINE Alu 283 320 0 2162 132 3 0 chr5 77459531 77459842 -122170308 - AluSx SINE Alu 0 312 1 1289 134 169 35 chr5 77460194 77460455 -122169695 + AluJo SINE Alu 1 296 -6 351 0 0 0 chr5 77460464 77460503 -122169647 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 222 0 0 chr5 77460504 77460558 -122169592 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 542 259 43 0 chr5 77460789 77460951 -122169199 + L1ME4a LINE L1 5671 5839 -282 24 0 0 0 chr5 77461201 77461225 -122168925 + AT_rich Low_complexity Low_complexity 1 24 0 228 224 134 49 chr5 77461240 77461463 -122168687 + L1ME4a LINE L1 5878 6119 -2 1546 198 10 14 chr5 77461495 77461783 -122168367 + AluJo SINE Alu 5 291 -21 1083 200 0 33 chr5 77461852 77462019 -122168131 + MER2 DNA MER2_type 1 161 -184 2637 114 23 40 chr5 77462019 77462448 -122167702 - MSTB LTR MaLR 0 426 5 1083 200 0 33 chr5 77462448 77462490 -122167660 + MER2 DNA MER2_type 161 203 -142 684 175 110 0 chr5 77462516 77462670 -122167480 + MER2 DNA MER2_type 172 342 -3 1002 92 0 0 chr5 77463203 77463334 -122166816 - AluSg/x SINE Alu -4 308 178 850 133 0 7 chr5 77463354 77463489 -122166661 - AluSg/x SINE Alu 0 310 177 2260 85 7 7 chr5 77463757 77464064 -122166086 - AluY SINE Alu 0 311 5 320 220 17 40 chr5 77464225 77464398 -122165752 + (TA)n Simple_repeat Simple_repeat 2 170 0 238 175 0 0 chr5 77464409 77464449 -122165701 + MER5C DNA MER1_type 1 40 -284 2240 111 0 0 chr5 77464474 77464771 -122165379 + AluSg1 SINE Alu 1 297 -12 538 215 123 34 chr5 77464784 77465002 -122165148 - MLT1F LTR MaLR -69 473 175 5830 109 12 17 chr5 77465046 77466945 -122163205 - L1PA15 LINE L1 0 6816 4912 2265 127 0 0 chr5 77466945 77467244 -122162906 + AluSx SINE Alu 1 299 -13 5830 109 12 17 chr5 77467244 77467316 -122162834 - L1PA15 LINE L1 -1904 4912 4841 363 125 0 0 chr5 77467316 77467372 -122162778 - L1PA15 LINE L1 -4929 1858 1803 389 193 11 0 chr5 77467378 77467466 -122162684 - L1PA15 LINE L1 -4850 1937 1849 4509 222 25 12 chr5 77467475 77469159 -122160991 - L1PA13 LINE L1 -3544 4040 2319 502 320 39 13 chr5 77470251 77470557 -122159593 - L1PA13 LINE L1 -7264 317 4 248 236 0 83 chr5 77470563 77470635 -122159515 - MLT1F LTR MaLR -406 161 96 21 0 0 0 chr5 77470733 77470754 -122159396 + AT_rich Low_complexity Low_complexity 1 21 0 2481 77 0 0 chr5 77470806 77471117 -122159033 - AluY SINE Alu 0 311 1 341 153 34 0 chr5 77471560 77471619 -122158531 - U7 snRNA snRNA -1 62 2 2257 125 0 3 chr5 77471720 77472033 -122158117 - AluSq SINE Alu -1 312 1 1275 174 154 4 chr5 77472457 77472716 -122157434 - AluJo SINE Alu 0 302 5 21 0 0 0 chr5 77473242 77473263 -122156887 + AT_rich Low_complexity Low_complexity 1 21 0 1545 181 31 0 chr5 77473300 77473560 -122156590 - AluJo SINE Alu -44 268 1 2187 92 3 46 chr5 77473963 77474289 -122155861 + AluSp SINE Alu 1 312 -1 262 253 27 0 chr5 77475256 77475331 -122154819 + CT-rich Low_complexity Low_complexity 2 78 0 341 300 0 0 chr5 77475568 77475658 -122154492 - L1MC4 LINE L1 -1339 6703 6614 2228 79 0 49 chr5 77475667 77475972 -122154178 - AluSg SINE Alu -20 290 1 414 0 0 0 chr5 77475972 77476018 -122154132 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 226 73 0 73 chr5 77476018 77476059 -122154091 - Alu SINE Alu -18 282 245 277 288 9 57 chr5 77476159 77476392 -122153758 - L2 LINE L2 -897 2417 2136 1571 196 6 22 chr5 77476478 77476795 -122153355 - AluJb SINE Alu 0 312 1 619 197 43 0 chr5 77476899 77477016 -122153134 + FLAM_A SINE Alu 1 122 -11 1952 141 18 0 chr5 77477023 77477300 -122152850 + AluSx SINE Alu 1 282 -30 261 0 0 0 chr5 77477300 77477329 -122152821 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 626 224 73 6 chr5 77477613 77477778 -122152372 - MER5B DNA MER1_type 0 178 3 345 313 39 28 chr5 77478053 77478235 -122151915 + MIR SINE MIR 22 207 -55 182 276 154 57 chr5 77478474 77478597 -122151553 + MIR SINE MIR 45 179 -83 2376 162 23 16 chr5 77478698 77479129 -122151021 - Tigger2a DNA MER2_type 0 434 1 2097 121 0 10 chr5 77479311 77479625 -122150525 - AluSx SINE Alu -1 311 1 33 25 0 0 chr5 77479900 77479940 -122150210 + AT_rich Low_complexity Low_complexity 1 40 0 959 257 84 65 chr5 77480038 77480590 -122149560 - L1MC4 LINE L1 -1853 5955 5388 1618 188 17 0 chr5 77480590 77480878 -122149272 - AluJo SINE Alu -17 295 3 959 257 84 65 chr5 77480878 77480943 -122149207 - L1MC4 LINE L1 -2420 5388 5326 345 230 56 6 chr5 77481113 77481274 -122148876 + (TA)n Simple_repeat Simple_repeat 2 170 0 428 172 139 130 chr5 77481289 77481374 -122148776 + L1MC4 LINE L1 7803 7886 -156 228 67 0 0 chr5 77481374 77481404 -122148746 + (TG)n Simple_repeat Simple_repeat 2 31 0 428 172 139 130 chr5 77481404 77481556 -122148594 + L1MC4 LINE L1 7886 8042 0 300 273 68 53 chr5 77481564 77481696 -122148454 + L1MC4 LINE L1 7759 7892 -150 226 281 0 11 chr5 77481704 77481793 -122148357 + L1ME4a LINE L1 5977 6064 -57 276 275 55 55 chr5 77481990 77482172 -122147978 - L1MC4 LINE L1 -1322 4824 4643 324 178 46 122 chr5 77482343 77482540 -122147610 - L1MC5 LINE L1 -21 7940 7759 2804 205 57 44 chr5 77482553 77482966 -122147184 + L1MC/D LINE L1 3402 3831 -2315 2144 119 0 0 chr5 77482966 77483252 -122146898 + AluSx SINE Alu 15 300 -12 2804 205 57 44 chr5 77483252 77483595 -122146555 + L1MC/D LINE L1 3831 4168 -1978 943 128 0 0 chr5 77483595 77483728 -122146422 + FLAM_C SINE Alu 1 133 0 2561 187 35 15 chr5 77483729 77483950 -122146200 + L1MC/D LINE L1 4965 5180 -1004 648 152 76 68 chr5 77483950 77484082 -122146068 + FLAM_C SINE Alu 1 133 0 2561 187 35 15 chr5 77484082 77484659 -122145491 + L1MC/D LINE L1 5180 5779 -405 710 284 23 6 chr5 77484894 77485070 -122145080 - MIR SINE MIR -81 181 3 312 304 87 22 chr5 77485416 77485554 -122144596 - MIR SINE MIR -70 192 46 318 169 31 0 chr5 77486210 77486275 -122143875 - L1ME LINE L1 -297 5824 5758 763 254 136 57 chr5 77486516 77486922 -122143228 - MLT1J LTR MaLR -65 446 9 24 32 0 0 chr5 77487106 77487137 -122143013 + AT_rich Low_complexity Low_complexity 1 31 0 3259 90 17 8 chr5 77487159 77487635 -122142515 - L1PA13 LINE L1 -3 6160 5681 3427 122 5 30 chr5 77487635 77488202 -122141948 - L1MC1 LINE L1 -4 6329 5776 1980 105 11 14 chr5 77488206 77488492 -122141658 - AluSq SINE Alu -16 297 13 276 137 0 0 chr5 77488497 77488548 -122141602 + L1MC/D LINE L1 5788 5838 -495 * 3717 174 15 22 chr5 77488545 77489436 -122140714 - L1MC1 LINE L1 -560 5773 4894 1891 173 0 3 chr5 77489436 77489742 -122140408 + AluJo SINE Alu 2 306 -6 3717 174 15 22 chr5 77489742 77490135 -122140015 - L1MC1 LINE L1 -1439 4894 4500 391 181 14 14 chr5 77490136 77490208 -122139942 - Tigger5 DNA MER2_type -1 2322 2251 274 163 0 0 chr5 77490177 77490220 -122139930 - Tigger5 DNA MER2_type -2268 55 13 * 351 151 27 27 chr5 77490220 77490293 -122139857 - Tigger5 DNA MER2_type 0 2323 2251 313 192 0 0 chr5 77490262 77490314 -122139836 - Tigger5 DNA MER2_type -2268 55 4 * 524 245 20 53 chr5 77490314 77490440 -122139710 - L1MC1 LINE L1 -1646 4500 4384 1808 172 3 0 chr5 77490440 77490743 -122139407 - AluSx SINE Alu -8 304 1 524 245 20 53 chr5 77490743 77490861 -122139289 - L1MC1 LINE L1 -1762 4384 4264 242 275 99 58 chr5 77491090 77491261 -122138889 - L1M4 LINE L1 -1215 4931 4754 1652 177 19 19 chr5 77492177 77492487 -122137663 - AluJo SINE Alu -2 310 1 632 289 128 0 chr5 77492718 77492936 -122137214 + MIR SINE MIR 6 251 -11 469 288 114 11 chr5 77492960 77493144 -122137006 - MIR SINE MIR -17 245 43 13126 87 6 4 chr5 77493172 77495780 -122134370 - L1PA7 LINE L1 -2 6152 3534 983 115 0 0 chr5 77495782 77495912 -122134238 - AluSp SINE Alu -183 130 1 14934 132 30 113 chr5 77495935 77499446 -122130704 - L1PA7 LINE L1 -2884 3262 41 191 258 214 0 chr5 77500404 77500493 -122129657 - L2 LINE L2 -239 3033 2926 249 284 0 0 chr5 77500880 77500947 -122129203 - MIR SINE MIR -13 249 183 233 256 64 13 chr5 77500983 77501061 -122129089 - MLT1J LTR MaLR -331 180 99 229 173 0 58 chr5 77501024 77501076 -122129074 - LTR67 LTR ERVL -418 139 91 * 330 87 0 0 chr5 77501837 77501883 -122128267 + (TGGA)n Simple_repeat Simple_repeat 1 46 0 495 249 40 51 chr5 77502222 77502309 -122127841 - MIR SINE MIR -14 248 162 3523 137 19 0 chr5 77502309 77502826 -122127324 + MER1A DNA MER1_type 1 527 0 495 249 40 51 chr5 77502826 77502915 -122127235 - MIR SINE MIR -100 162 74 494 204 293 30 chr5 77503018 77503185 -122126965 + MER58A DNA MER1_type 11 221 -3 29 28 0 0 chr5 77503611 77503647 -122126503 + AT_rich Low_complexity Low_complexity 1 36 0 514 239 123 65 chr5 77504034 77504253 -122125897 - MLT1G1 LTR MaLR -5 590 295 254 227 61 15 chr5 77504340 77504406 -122125744 - MLT1G1 LTR MaLR -349 200 132 298 137 53 42 chr5 77505101 77505196 -122124954 + (CTATA)n Simple_repeat Simple_repeat 4 99 0 6312 32 3 5 chr5 77505420 77506173 -122123977 + L1PA4 LINE L1 5402 6152 -3 180 0 0 0 chr5 77506243 77506263 -122123887 + (CAAAAA)n Simple_repeat Simple_repeat 5 24 0 1527 215 3 3 chr5 77507841 77508129 -122122021 - AluJo SINE Alu -22 290 3 316 98 0 0 chr5 77508570 77508611 -122121539 - Alu SINE Alu -12 290 250 2285 100 0 3 chr5 77510808 77511107 -122119043 - AluSx SINE Alu -14 298 1 24 0 0 0 chr5 77511461 77511485 -122118665 + AT_rich Low_complexity Low_complexity 1 24 0 2148 107 40 0 chr5 77512010 77512308 -122117842 - AluSx SINE Alu -2 310 1 993 201 5 5 chr5 77512415 77512609 -122117541 + AluJb SINE Alu 1 194 -118 204 125 0 0 chr5 77512622 77512654 -122117496 + (A)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr5 77512737 77512760 -122117390 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 77512772 77512804 -122117346 + AT_rich Low_complexity Low_complexity 1 32 0 23 68 0 0 chr5 77513429 77513473 -122116677 + AT_rich Low_complexity Low_complexity 1 44 0 2222 101 0 13 chr5 77514321 77514629 -122115521 - AluY SINE Alu -7 304 1 2353 90 0 3 chr5 77515316 77515616 -122114534 + AluSx SINE Alu 1 299 -13 272 314 19 0 chr5 77516824 77516929 -122113221 - MER103 DNA DNA -59 107 1 1853 120 4 11 chr5 77517069 77517335 -122112815 + AluSp SINE Alu 33 296 -17 232 226 170 19 chr5 77517686 77517792 -122112358 - L2 LINE L2 -762 2552 2431 596 223 109 16 chr5 77517981 77518174 -122111976 - L2 LINE L2 0 3313 3103 545 264 45 57 chr5 77518854 77519100 -122111050 + L2 LINE L2 3067 3309 -4 25 31 0 0 chr5 77519310 77519342 -122110808 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 77519557 77519579 -122110571 + AT_rich Low_complexity Low_complexity 1 22 0 1743 143 18 14 chr5 77520289 77520597 -122109553 + AluSx SINE Alu 1 309 0 588 262 78 20 chr5 77520964 77521208 -122108942 + L1MC4a LINE L1 5254 5511 -2297 1139 200 88 11 chr5 77521240 77521657 -122108493 - MLT1D LTR MaLR -3 502 1 792 274 104 3 chr5 77521665 77522001 -122108149 + L1MC4a LINE L1 5572 5941 -1867 573 15 0 0 chr5 77522030 77522096 -122108054 + (CA)n Simple_repeat Simple_repeat 2 67 0 1222 58 0 0 chr5 77522104 77522258 -122107892 - AluY SINE Alu -8 303 150 843 219 0 0 chr5 77523704 77523896 -122106254 + L1MA4 LINE L1 6033 6224 -76 2895 195 61 17 chr5 77524075 77524717 -122105433 - L1MD3 LINE L1 -2 7993 7324 702 116 152 0 chr5 77524721 77524859 -122105291 - L1MB3 LINE L1 -15 6168 6010 2024 102 65 0 chr5 77525089 77525382 -122104768 + AluSx SINE Alu 1 312 0 1875 163 0 10 chr5 77525429 77525729 -122104421 + AluJb SINE Alu 1 297 -15 2008 116 32 0 chr5 77525793 77526078 -122104072 - AluSg SINE Alu -16 294 1 1633 178 35 3 chr5 77526227 77526513 -122103637 + AluJo SINE Alu 1 295 -17 395 198 0 25 chr5 77526778 77526859 -122103291 + Tigger5 DNA MER2_type 1 79 -2244 402 175 0 0 chr5 77526863 77526926 -122103224 - Tigger5 DNA MER2_type -9 2314 2252 327 278 0 0 chr5 77526922 77526994 -122103156 + Tigger5 DNA MER2_type 2252 2323 0 * 788 200 18 18 chr5 77527153 77527318 -122102832 - MER46C DNA MER2_type -21 317 153 337 154 0 0 chr5 77527369 77527421 -122102729 - MER46C DNA MER2_type -280 58 7 2260 102 20 3 chr5 77527627 77527932 -122102218 + AluSq SINE Alu 1 310 -3 3301 158 27 14 chr5 77527941 77528575 -122101575 + L1MC1 LINE L1 5692 6333 0 28 61 0 0 chr5 77530496 77530545 -122099605 + AT_rich Low_complexity Low_complexity 1 49 0 1741 134 21 41 chr5 77531618 77531908 -122098242 + AluSx SINE Alu 1 284 -28 25 31 0 0 chr5 77532038 77532070 -122098080 + AT_rich Low_complexity Low_complexity 1 32 0 532 271 139 11 chr5 77532730 77533105 -122097045 + L1ME3A LINE L1 5225 5646 -524 862 201 35 173 chr5 77533260 77533722 -122096428 + L1ME3A LINE L1 5694 6091 -79 2067 170 42 25 chr5 77534042 77534575 -122095575 + MLT2A2 LTR ERVL 1 554 0 1636 208 19 108 chr5 77534706 77535187 -122094963 - MER77 LTR ERV1 -165 440 3 427 283 76 21 chr5 77536165 77536310 -122093840 + MER63A DNA MER1_type 58 210 0 445 343 52 72 chr5 77536327 77536729 -122093421 + L2 LINE L2 2879 3272 0 1511 192 14 11 chr5 77537050 77537337 -122092813 - AluJo SINE Alu -24 288 1 357 24 0 0 chr5 77537772 77537814 -122092336 + (CA)n Simple_repeat Simple_repeat 2 43 0 373 169 169 0 chr5 77538246 77538335 -122091815 + MLT1J LTR MaLR 4 107 -404 621 299 63 41 chr5 77538405 77538491 -122091659 + L1MEd LINE L1 325 408 -5711 8205 53 9 0 chr5 77538491 77539448 -122090702 - LTR5 LTR ERVK -3 966 1 621 299 63 41 chr5 77539448 77539679 -122090471 + L1MEd LINE L1 408 649 -5470 660 247 102 81 chr5 77539777 77539840 -122090310 + MLT1J LTR MaLR 121 181 -330 2405 86 0 3 chr5 77539840 77540142 -122090008 + AluSx SINE Alu 1 301 -11 660 247 102 81 chr5 77540142 77540459 -122089691 + MLT1J LTR MaLR 181 509 -2 737 268 159 57 chr5 77540779 77540853 -122089297 - L2 LINE L2 -4 3309 3244 1780 179 0 3 chr5 77540853 77541150 -122089000 - AluJo SINE Alu -16 296 1 737 268 159 57 chr5 77541150 77541534 -122088616 - L2 LINE L2 -69 3244 2804 38 0 0 0 chr5 77541889 77541927 -122088223 + AT_rich Low_complexity Low_complexity 1 38 0 1173 176 45 0 chr5 77541927 77542126 -122088024 - AluJb SINE Alu -20 292 85 266 179 36 0 chr5 77542941 77542997 -122087153 - MER58A DNA MER1_type -28 79 22 268 311 91 0 chr5 77543104 77543236 -122086914 + MIR SINE MIR 106 249 -13 4023 67 8 8 chr5 77543487 77543993 -122086157 - SVA Other Other 0 1386 881 23 0 0 0 chr5 77544295 77544318 -122085832 + GC_rich Low_complexity Low_complexity 1 23 0 223 65 43 22 chr5 77544967 77545013 -122085137 + C-rich Low_complexity Low_complexity 3 49 0 428 168 147 32 chr5 77545020 77545115 -122085035 - FRAM SINE Alu -36 140 35 395 228 104 64 chr5 77545220 77545422 -122084728 - L2 LINE L2 0 3313 3104 353 293 163 0 chr5 77545428 77545551 -122084599 + MIR SINE MIR 34 176 -86 1488 264 152 48 chr5 77545560 77546413 -122083737 - L2 LINE L2 -1176 2138 1197 545 232 82 122 chr5 77546413 77546500 -122083650 - MLT1I LTR MaLR 0 409 320 826 161 8 23 chr5 77546500 77546630 -122083520 + FLAM_C SINE Alu 1 128 -5 545 232 82 122 chr5 77546630 77546710 -122083440 - MLT1I LTR MaLR -89 320 238 2505 196 76 4 chr5 77546710 77547194 -122082956 - LTR40a LTR ERVL 0 519 1 545 232 82 122 chr5 77547194 77547451 -122082699 - MLT1I LTR MaLR -171 238 1 511 312 29 23 chr5 77547451 77547624 -122082526 - L2 LINE L2 -2113 1201 1028 359 178 14 0 chr5 77547638 77547711 -122082439 + MSTD LTR MaLR 317 390 -6 1137 305 20 2 chr5 77547714 77548107 -122082043 - L2 LINE L2 -2281 1033 634 2367 137 51 5 chr5 77548133 77548324 -122081826 - MLT1B LTR MaLR 0 390 209 315 0 0 0 chr5 77548324 77548359 -122081791 + (TG)n Simple_repeat Simple_repeat 2 36 0 2367 137 51 5 chr5 77548359 77548540 -122081610 - MLT1B LTR MaLR -181 209 1 22 0 0 0 chr5 77549631 77549653 -122080497 + AT_rich Low_complexity Low_complexity 1 22 0 778 204 41 17 chr5 77550268 77550440 -122079710 + MER69 DNA AcHobo 1 176 -1050 265 250 18 0 chr5 77550444 77550500 -122079650 + MER69 DNA AcHobo 2466 2522 -4 215 264 11 22 chr5 77550598 77550689 -122079461 + (TG)n Simple_repeat Simple_repeat 2 91 0 218 158 12 61 chr5 77550761 77550843 -122079307 + A-rich Low_complexity Low_complexity 2 79 0 2231 96 0 0 chr5 77551395 77551701 -122078449 - AluSx SINE Alu 0 306 1 2874 103 45 7 chr5 77551746 77552173 -122077977 + MER65A LTR ERV1 1 443 -2 254 232 0 12 chr5 77552411 77552493 -122077657 + CT-rich Low_complexity Low_complexity 1 81 0 320 270 53 58 chr5 77553872 77554061 -122076089 - L1MDa LINE L1 -6190 350 163 29 0 0 0 chr5 77554118 77554147 -122076003 + AT_rich Low_complexity Low_complexity 1 29 0 514 196 47 0 chr5 77554882 77554898 -122075252 + MER5A DNA MER1_type 1 21 -168 280 241 267 17 chr5 77554898 77555014 -122075136 - MER5A DNA MER1_type -2 187 43 2061 113 49 0 chr5 77555736 77556020 -122074130 - AluSp SINE Alu -15 298 1 1318 151 9 23 chr5 77556292 77556510 -122073640 - MER20 DNA MER1_type -2 217 3 201 357 21 56 chr5 77556852 77556995 -122073155 - MIR SINE MIR -123 139 2 292 269 85 116 chr5 77557456 77557854 -122072296 - L1ME4a LINE L1 -161 5960 5575 228 191 21 0 chr5 77559180 77559227 -122070923 + L2 LINE L2 3225 3272 0 * 511 264 34 55 chr5 77559221 77559413 -122070737 - MIR SINE MIR -61 201 13 348 318 53 30 chr5 77559817 77559949 -122070201 + MIR SINE MIR 35 169 -93 312 197 14 14 chr5 77560150 77560221 -122069929 + MIR SINE MIR 173 243 -19 195 231 0 39 chr5 77560372 77560424 -122069726 - L2 LINE L2 0 3313 3264 1187 158 22 22 chr5 77560880 77561108 -122069042 + L1MB3 LINE L1 5956 6183 0 21 0 0 0 chr5 77562263 77562284 -122067866 + AT_rich Low_complexity Low_complexity 1 21 0 1816 145 0 11 chr5 77562354 77562636 -122067514 + AluJb SINE Alu 1 279 -33 886 287 105 29 chr5 77563358 77563738 -122066412 - MLT1K LTR MaLR 0 588 180 2216 137 0 3 chr5 77564524 77564837 -122065313 + AluSx SINE Alu 1 312 0 846 230 54 27 chr5 77564916 77565138 -122065012 - MLT1K LTR MaLR -27 561 334 373 171 92 13 chr5 77565170 77565246 -122064904 - MLT1K LTR MaLR -319 269 188 473 335 100 20 chr5 77565438 77565638 -122064512 + L2 LINE L2 3057 3272 0 2638 173 55 0 chr5 77566417 77566850 -122063300 + MSTB2 LTR MaLR 1 457 0 223 250 0 0 chr5 77567207 77567251 -122062899 + L2 LINE L2 3211 3254 -18 446 252 19 43 chr5 77568045 77568242 -122061908 - L1ME LINE L1 -439 5682 5491 189 175 0 0 chr5 77568746 77568786 -122061364 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 2201 101 20 0 chr5 77569665 77569971 -122060179 + AluSx SINE Alu 1 312 0 986 179 88 109 chr5 77570209 77570629 -122059521 - HsTC2 DNA Tc2 -15 1883 1297 611 146 18 27 chr5 77570685 77570795 -122059355 - MSTC LTR MaLR -319 109 1 229 255 223 6 chr5 77571151 77571308 -122058842 - Charlie7 DNA MER1_type -2 2610 2420 722 197 24 24 chr5 77571343 77571470 -122058680 - AluSq/x SINE Alu -185 127 1 497 307 51 9 chr5 77571537 77571752 -122058398 - L1ME LINE L1 -313 5808 5585 2262 122 0 0 chr5 77571871 77572182 -122057968 - AluSq SINE Alu -1 312 2 23 33 0 0 chr5 77572588 77572618 -122057532 + AT_rich Low_complexity Low_complexity 1 30 0 1721 199 3 3 chr5 77572728 77573030 -122057120 - AluJb SINE Alu -10 302 1 348 275 78 21 chr5 77573047 77573189 -122056961 + MIR SINE MIR 113 262 0 356 364 21 7 chr5 77573860 77574000 -122056150 - MIR SINE MIR -108 154 13 251 254 28 14 chr5 77574266 77574337 -122055813 - L1MC/D LINE L1 -1895 5913 5842 277 160 20 0 chr5 77574446 77574496 -122055654 + L1ME LINE L1 5532 5582 -539 263 278 23 58 chr5 77574594 77574767 -122055383 + L1ME LINE L1 5718 5884 -237 44002 32 21 1 chr5 77574922 77580985 -122049165 + L1PA2 LINE L1 3 6188 0 231 309 0 0 chr5 77582361 77582416 -122047734 + L2 LINE L2 3006 3060 -253 416 271 68 30 chr5 77582573 77582706 -122047444 + L2 LINE L2 3175 3312 -1 2157 180 55 55 chr5 77582789 77583294 -122046856 + MLT1D LTR MaLR 1 505 0 1401 240 110 36 chr5 77583428 77583982 -122046168 - MLT1G1 LTR MaLR 0 595 1 1114 206 52 12 chr5 77584456 77584704 -122045446 - MLT1A1 LTR MaLR 0 365 108 338 286 50 25 chr5 77584704 77584823 -122045327 - MLT1A1 LTR MaLR -458 137 16 613 137 10 10 chr5 77584905 77585007 -122045143 - MLT1A2 LTR MaLR -272 102 1 1700 168 30 20 chr5 77585139 77585437 -122044713 - AluJb SINE Alu -11 301 1 940 160 98 10 chr5 77585456 77585650 -122044500 - Tigger3(Golem) DNA MER2_type 0 3029 2819 472 191 90 0 chr5 77585644 77585733 -122044417 - Tigger3(Golem) DNA MER2_type -2932 97 1 * 421 253 29 34 chr5 77586966 77587124 -122043026 + MIR SINE MIR 13 177 -85 1238 202 5 0 chr5 77587182 77587400 -122042750 + AluJo SINE Alu 86 304 -8 440 287 81 95 chr5 77588224 77588520 -122041630 + L2 LINE L2 2980 3271 -1 35 41 0 0 chr5 77590019 77590068 -122040082 + AT_rich Low_complexity Low_complexity 1 49 0 2204 92 41 7 chr5 77590325 77590617 -122039533 + AluSg SINE Alu 1 302 -8 1569 191 54 0 chr5 77590628 77590906 -122039244 + AluJo SINE Alu 1 293 -19 25 0 0 0 chr5 77590906 77590931 -122039219 + AT_rich Low_complexity Low_complexity 1 25 0 226 315 231 0 chr5 77590994 77591102 -122039048 + MIR3 SINE MIR 69 201 -7 236 268 65 8 chr5 77591252 77591375 -122038775 - L1ME4a LINE L1 -36 6085 5956 1359 122 67 4 chr5 77591472 77591726 -122038424 - L1MB3 LINE L1 -3 6180 5911 462 263 15 0 chr5 77591727 77591860 -122038290 - L1ME4a LINE L1 -289 5832 5698 647 244 53 63 chr5 77592453 77592772 -122037378 - L1MC4a LINE L1 -1815 5993 5678 2812 129 20 0 chr5 77592797 77593238 -122036912 - L1MB2 LINE L1 -7 6164 5715 262 254 185 15 chr5 77593407 77593537 -122036613 - MIR SINE MIR -74 188 37 2273 114 0 0 chr5 77593817 77594125 -122036025 + AluSg SINE Alu 1 308 -2 242 235 0 0 chr5 77594521 77594572 -122035578 + L2 LINE L2 3262 3312 -1 243 0 0 0 chr5 77594599 77594626 -122035524 + (T)n Simple_repeat Simple_repeat 1 27 0 370 333 28 0 chr5 77595327 77595435 -122034715 + MER91A DNA MER1_type 73 183 -13 1014 242 57 15 chr5 77595616 77595880 -122034270 - MLT1J LTR MaLR -149 362 88 249 242 0 0 chr5 77595884 77595946 -122034204 - MIR SINE MIR -45 217 156 371 242 235 20 chr5 77601499 77601652 -122028498 + MER5A DNA MER1_type 4 189 0 3256 116 28 0 chr5 77602854 77603354 -122026796 + MER75 DNA T2_type 1 514 0 526 300 119 40 chr5 77603426 77603653 -122026497 + MIR SINE MIR 15 259 -3 369 311 31 37 chr5 77604096 77604257 -122025893 + MIR SINE MIR 49 208 -54 242 200 105 21 chr5 77604415 77604510 -122025640 + L1ME4a LINE L1 6009 6111 -10 224 287 176 0 chr5 77605906 77606014 -122024136 - MIR SINE MIR -100 162 36 2219 99 10 13 chr5 77606380 77606682 -122023468 + AluSx SINE Alu 1 301 -11 25 0 0 0 chr5 77606700 77606725 -122023425 + AT_rich Low_complexity Low_complexity 1 25 0 26 82 0 0 chr5 77606909 77606970 -122023180 + AT_rich Low_complexity Low_complexity 1 61 0 1033 121 0 25 chr5 77609378 77609582 -122020568 + AluSq SINE Alu 131 330 0 296 191 0 15 chr5 77609624 77609692 -122020458 - L1MD1 LINE L1 -20 6222 6156 466 290 5 70 chr5 77609773 77609959 -122020191 - MIR SINE MIR -65 197 24 26 0 0 0 chr5 77610320 77610346 -122019804 + AT_rich Low_complexity Low_complexity 1 26 0 673 256 198 18 chr5 77610895 77611223 -122018927 - L1MD2 LINE L1 -13 6346 5960 22 0 0 0 chr5 77611732 77611754 -122018396 + AT_rich Low_complexity Low_complexity 1 22 0 769 225 172 52 chr5 77612149 77612691 -122017459 + HAL1 LINE L1 1872 2478 -29 500 285 66 0 chr5 77613846 77613983 -122016167 + MIR SINE MIR 1 146 -116 84 11 0 0 chr5 77614281 77614372 -122015778 + AT_rich Low_complexity Low_complexity 1 91 0 2212 116 3 7 chr5 77615205 77615515 -122014635 - AluSg SINE Alu -1 309 1 181 222 0 22 chr5 77615850 77615895 -122014255 - MER5B DNA MER1_type -21 157 114 2253 89 7 3 chr5 77615939 77616232 -122013918 - AluSg1 SINE Alu -15 294 1 21 0 0 0 chr5 77616401 77616422 -122013728 + AT_rich Low_complexity Low_complexity 1 21 0 1862 157 7 4 chr5 77616422 77616703 -122013447 - AluJo SINE Alu -30 282 1 2354 67 13 3 chr5 77617063 77617362 -122012788 - AluSq SINE Alu -11 302 1 2459 64 0 0 chr5 77617570 77617866 -122012284 - AluY SINE Alu -15 296 1 2363 75 7 0 chr5 77619737 77620029 -122010121 - AluY SINE Alu -17 294 1 22 0 0 0 chr5 77621197 77621219 -122008931 + AT_rich Low_complexity Low_complexity 1 22 0 1956 137 27 0 chr5 77622585 77622878 -122007272 - AluSq SINE Alu -12 301 1 382 268 146 8 chr5 77623382 77623505 -122006645 - MIR SINE MIR -111 151 12 966 130 342 4 chr5 77624053 77624322 -122005828 + MER46B DNA MER2_type 2 236 0 387 199 58 6 chr5 77625680 77625836 -122004314 + (TA)n Simple_repeat Simple_repeat 1 164 0 781 218 45 0 chr5 77626724 77626880 -122003270 + FAM SINE Alu 2 164 -11 262 133 13 40 chr5 77627048 77627123 -122003027 - L1MA7 LINE L1 -1 6290 6218 192 111 0 0 chr5 77628355 77628391 -122001759 + (A)n Simple_repeat Simple_repeat 1 36 0 40570 33 23 4 chr5 77628393 77634454 -121995696 + L1PA3 LINE L1 1 6177 0 201 373 146 19 chr5 77634759 77634793 -121995357 + MER5A DNA MER1_type 9 37 -152 1829 69 0 12 chr5 77634793 77635040 -121995110 + L1PA8 LINE L1 5928 6171 -1 201 373 146 19 chr5 77635040 77635163 -121994987 + MER5A DNA MER1_type 37 186 -3 452 135 48 67 chr5 77635868 77635972 -121994178 - MIR SINE MIR -75 187 86 2360 90 3 0 chr5 77636044 77636345 -121993805 + AluSc SINE Alu 1 302 -7 2306 101 3 3 chr5 77636572 77636869 -121993281 + AluSg SINE Alu 1 297 -13 245 312 43 11 chr5 77637374 77637467 -121992683 - MIR3 SINE MIR -1 207 112 371 150 88 181 chr5 77637490 77637616 -121992534 - MER113 DNA MER1_type? -63 458 355 1840 133 39 32 chr5 77637616 77637925 -121992225 + AluJb SINE Alu 1 311 -1 371 150 88 181 chr5 77637925 77637991 -121992159 - MER113 DNA MER1_type? -166 355 284 304 222 40 30 chr5 77637990 77638089 -121992061 - MER113 DNA MER1_type? -421 100 1 * 1687 164 52 0 chr5 77639261 77639547 -121990603 - AluJo SINE Alu -11 301 1 188 189 0 75 chr5 77640291 77640344 -121989806 - MER5B DNA MER1_type -129 49 1 1524 171 67 19 chr5 77640776 77641045 -121989105 + AluJo SINE Alu 1 282 -30 2176 120 3 0 chr5 77641529 77641828 -121988322 - AluSg SINE Alu -10 300 1 28 29 0 0 chr5 77642158 77642193 -121987957 + AT_rich Low_complexity Low_complexity 1 35 0 664 143 19 0 chr5 77642193 77642298 -121987852 - U6 snRNA snRNA 0 107 1 653 233 102 25 chr5 77642529 77642765 -121987385 + MLT1J LTR MaLR 7 260 -251 1364 201 15 90 chr5 77643033 77643432 -121986718 + MLT1A2 LTR MaLR 2 370 -4 27 0 0 0 chr5 77643865 77643892 -121986258 + AT_rich Low_complexity Low_complexity 1 27 0 22 70 0 0 chr5 77644263 77644306 -121985844 + AT_rich Low_complexity Low_complexity 1 43 0 405 326 99 70 chr5 77646412 77646796 -121983354 - L2 LINE L2 -215 3057 2686 2142 103 14 7 chr5 77646796 77647086 -121983064 + AluSx SINE Alu 1 292 -20 405 326 99 70 chr5 77647086 77647439 -121982711 - L2 LINE L2 -586 2686 2309 282 270 36 72 chr5 77647439 77647550 -121982600 - MER91C DNA MER1_type -1 139 33 1567 136 91 53 chr5 77647688 77647729 -121982421 - THE1C LTR MaLR 0 375 337 2454 69 7 0 chr5 77647729 77648032 -121982118 + AluY SINE Alu 1 305 -6 1567 136 91 53 chr5 77648032 77648351 -121981799 - THE1C LTR MaLR -38 337 1 947 126 0 14 chr5 77650524 77650667 -121979483 + FLAM_C SINE Alu 1 141 -2 2451 61 0 0 chr5 77650713 77651008 -121979142 - AluSx SINE Alu -17 295 1 266 289 21 21 chr5 77651016 77651113 -121979037 - MER5A DNA MER1_type -86 103 7 2237 98 7 0 chr5 77651125 77651422 -121978728 + AluSx SINE Alu 1 299 -13 198 103 0 0 chr5 77652247 77652276 -121977874 + (GA)n Simple_repeat Simple_repeat 2 30 0 488 257 83 35 chr5 77652334 77652478 -121977672 - L2 LINE L2 0 3272 3122 406 232 0 0 chr5 77652497 77652579 -121977571 + MIR SINE MIR 72 153 -109 537 223 10 0 chr5 77652599 77652702 -121977448 - MIR SINE MIR -96 166 63 192 274 137 21 chr5 77652764 77652859 -121977291 - L2 LINE L2 -439 2875 2770 884 273 45 57 chr5 77652866 77652957 -121977193 - L2 LINE L2 -684 2630 2539 1121 161 95 104 chr5 77652957 77653304 -121976846 + MER2 DNA MER2_type 1 344 0 884 273 45 57 chr5 77653304 77653633 -121976517 - L2 LINE L2 -775 2539 2215 269 254 0 0 chr5 77653642 77653705 -121976445 + MLT1H LTR MaLR 12 74 -475 420 210 50 76 chr5 77653807 77653926 -121976224 + MLT1H LTR MaLR 238 353 -196 266 194 29 117 chr5 77653968 77654071 -121976079 + MLT1H LTR MaLR 456 549 0 651 271 0 0 chr5 77654078 77654255 -121975895 - L2 LINE L2 -1104 2210 2034 254 317 24 24 chr5 77654580 77654703 -121975447 + MIR SINE MIR 39 161 -101 244 239 159 0 chr5 77654832 77654920 -121975230 + MLT1J1 LTR MaLR 56 157 -289 29 0 0 0 chr5 77655331 77655360 -121974790 + AT_rich Low_complexity Low_complexity 1 29 0 2047 124 45 3 chr5 77655794 77656124 -121974026 - L1PA16 LINE L1 -9 6157 5814 714 162 0 8 chr5 77656124 77656241 -121973909 - FLAM_C SINE Alu -21 122 7 1254 132 0 0 chr5 77656242 77656439 -121973711 - L1PA16 LINE L1 -332 5834 5638 2996 96 72 20 chr5 77658115 77658603 -121971547 - LTR26B LTR ERV1 -16 515 3 21 0 0 0 chr5 77658614 77658635 -121971515 + AT_rich Low_complexity Low_complexity 1 21 0 7189 89 10 3 chr5 77658635 77659809 -121970341 - L1MA1 LINE L1 0 6302 5119 21 57 0 0 chr5 77660123 77660158 -121969992 + AT_rich Low_complexity Low_complexity 1 35 0 2694 101 21 2 chr5 77660573 77660999 -121969151 - LTR56 LTR ERV1 -2 443 10 660 262 14 0 chr5 77661005 77661150 -121969000 - MER5A DNA MER1_type -32 157 11 2142 169 29 5 chr5 77661584 77661968 -121968182 - MSTD LTR MaLR -3 393 1 1083 193 62 73 chr5 77662241 77662253 -121967897 - MLT2B1 LTR ERVL -48 366 355 258 32 0 0 chr5 77662253 77662284 -121967866 + (TG)n Simple_repeat Simple_repeat 2 32 0 1083 193 62 73 chr5 77662284 77662648 -121967502 - MLT2B1 LTR ERVL -59 355 1 2061 121 3 10 chr5 77663494 77663792 -121966358 + AluSx SINE Alu 7 302 -10 2164 4 0 0 chr5 77663826 77664059 -121966091 + AluYa5 SINE Alu 71 303 -8 288 213 12 50 chr5 77664112 77664192 -121965958 + MLT1J1 LTR MaLR 363 439 -7 2048 108 14 0 chr5 77664449 77664727 -121965423 - AluSx SINE Alu -20 292 11 1846 108 42 8 chr5 77664727 77664986 -121965164 - AluSx SINE Alu -44 268 1 2415 74 3 0 chr5 77665340 77665639 -121964511 + AluY SINE Alu 1 300 -11 1785 138 6 66 chr5 77666013 77666331 -121963819 + AluJb SINE Alu 5 303 -9 1846 156 60 9 chr5 77666427 77666774 -121963376 - MLT1A1 LTR MaLR 0 365 1 925 315 35 56 chr5 77668828 77669348 -121960802 + LTR67 LTR ERVL 1 509 -48 411 270 104 52 chr5 77669839 77670165 -121959985 + MLT1K LTR MaLR 131 473 -115 839 163 0 0 chr5 77670276 77670405 -121959745 - FLAM_C SINE Alu -2 131 3 389 228 185 58 chr5 77670490 77670749 -121959401 - L1ME4a LINE L1 0 6121 5830 312 262 0 24 chr5 77671313 77671362 -121958788 + (TG)n Simple_repeat Simple_repeat 1 49 -33 1522 178 52 54 chr5 77671362 77671711 -121958439 - MER7A DNA MER2_type 0 346 1 312 262 0 24 chr5 77671711 77671745 -121958405 + (TG)n Simple_repeat Simple_repeat 49 82 0 3131 233 108 124 chr5 77672197 77672701 -121957449 - L2 LINE L2 -1 3312 2801 2257 128 0 0 chr5 77672701 77673013 -121957137 + AluSx SINE Alu 1 312 0 3131 233 108 124 chr5 77673013 77674199 -121955951 - L2 LINE L2 -512 2801 1597 1942 35 51 28 chr5 77674199 77674454 -121955696 - AluY SINE Alu -16 295 35 2154 104 24 3 chr5 77674462 77674760 -121955390 - AluSc SINE Alu -5 304 1 3131 233 108 124 chr5 77674760 77675561 -121954589 - L2 LINE L2 -1723 1590 844 1594 218 33 52 chr5 77675634 77675819 -121954331 - L1ME2 LINE L1 -10 6154 5967 2223 120 3 0 chr5 77675819 77676127 -121954023 - AluSx SINE Alu -3 309 1 1594 218 33 52 chr5 77676127 77676482 -121953668 - L1ME2 LINE L1 -197 5967 5624 2076 146 13 0 chr5 77677746 77678047 -121952103 + AluSx SINE Alu 1 305 -7 586 248 99 5 chr5 77678787 77678989 -121951161 - LTR16C LTR ERVL -18 473 253 189 107 0 0 chr5 77679748 77679776 -121950374 + (TG)n Simple_repeat Simple_repeat 1 28 0 288 227 15 0 chr5 77680195 77680261 -121949889 + MLT1K LTR MaLR 522 588 0 2142 131 0 3 chr5 77680428 77680725 -121949425 + AluSx SINE Alu 1 296 -16 1974 201 40 100 chr5 77680737 77681163 -121948987 - Charlie1a DNA MER1_type -2148 613 163 2214 128 0 0 chr5 77681163 77681467 -121948683 + AluSx SINE Alu 1 304 -8 1974 201 40 100 chr5 77681467 77681575 -121948575 - Charlie1a DNA MER1_type -2598 163 122 2296 141 80 5 chr5 77681575 77681973 -121948177 + MSTA LTR MaLR 1 428 0 1974 201 40 100 chr5 77681973 77682088 -121948062 - Charlie1a DNA MER1_type -2639 122 2 1302 277 21 57 chr5 77682106 77682658 -121947492 - L2 LINE L2 0 3313 2783 975 177 0 0 chr5 77682703 77682861 -121947289 + FRAM SINE Alu 1 155 -21 276 100 0 0 chr5 77682861 77682901 -121947249 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 548 264 170 0 chr5 77682957 77683116 -121947034 - L2 LINE L2 -707 2607 2422 3368 214 73 31 chr5 77683125 77683409 -121946741 + L1MD2 LINE L1 4975 5246 -1113 402 74 0 0 chr5 77683409 77683463 -121946687 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 3368 214 73 31 chr5 77683463 77684497 -121945653 + L1MD2 LINE L1 5246 6344 -15 771 294 156 4 chr5 77684499 77684768 -121945382 - L2 LINE L2 -885 2429 2120 297 0 0 0 chr5 77684869 77684902 -121945248 + (TG)n Simple_repeat Simple_repeat 2 34 0 203 167 0 0 chr5 77685060 77685096 -121945054 + (CAT)n Simple_repeat Simple_repeat 1 36 0 604 284 106 12 chr5 77686726 77687149 -121943001 + L1M4 LINE L1 2972 3434 -2712 330 286 78 19 chr5 77687202 77687356 -121942794 - L1M4 LINE L1 -801 5345 5183 228 313 61 26 chr5 77687894 77688009 -121942141 + MIR SINE MIR 112 230 -32 26 0 0 0 chr5 77688079 77688105 -121942045 + AT_rich Low_complexity Low_complexity 1 26 0 349 358 126 18 chr5 77688126 77688635 -121941515 - L1M4 LINE L1 -1603 4543 3980 21 36 0 0 chr5 77689246 77689274 -121940876 + AT_rich Low_complexity Low_complexity 1 28 0 237 231 26 34 chr5 77689406 77689523 -121940627 + (TA)n Simple_repeat Simple_repeat 2 117 0 2284 110 0 0 chr5 77691469 77691779 -121938371 + AluSx SINE Alu 1 310 -2 372 257 114 9 chr5 77692425 77692530 -121937620 - MIR SINE MIR -77 131 16 7187 48 4 0 chr5 77692769 77693740 -121936410 - L1PA6 LINE L1 -11 6143 5171 22 56 0 0 chr5 77694289 77694325 -121935825 + AT_rich Low_complexity Low_complexity 1 36 0 3058 191 133 24 chr5 77694572 77695370 -121934780 + Charlie2a DNA MER1_type 1477 2413 -449 5981 69 97 2 chr5 77695370 77696823 -121933327 - L1PA10 LINE L1 0 6168 4712 3058 191 133 24 chr5 77696823 77697052 -121933098 + Charlie2a DNA MER1_type 2413 2616 -246 201 94 0 0 chr5 77697062 77697094 -121933056 + (TTA)n Simple_repeat Simple_repeat 2 33 0 13672 208 13 36 chr5 77697096 77698693 -121931457 - L1PB1 LINE L1 -12 6139 4507 2034 138 39 33 chr5 77698693 77699055 -121931095 + THE1B LTR MaLR 1 364 0 13672 208 13 36 chr5 77699055 77702218 -121927932 - L1PB1 LINE L1 -1644 4507 1453 342 0 0 0 chr5 77702218 77702256 -121927894 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 40448 40 13 1 chr5 77702256 77708041 -121922109 - L1PA3 LINE L1 -10 6145 298 414 235 35 0 chr5 77708906 77708991 -121921159 + MLT1J LTR MaLR 1 88 -423 283 262 0 24 chr5 77709333 77709417 -121920733 - L1ME4a LINE L1 -87 6034 5953 21 100 0 0 chr5 77709460 77709530 -121920620 + AT_rich Low_complexity Low_complexity 1 70 0 716 247 25 0 chr5 77709530 77709692 -121920458 - MIR SINE MIR 0 262 97 254 286 0 0 chr5 77709695 77709758 -121920392 + L2 LINE L2 3246 3308 -5 269 278 14 0 chr5 77709776 77709848 -121920302 - MIR SINE MIR -189 73 1 2261 102 0 0 chr5 77709944 77710237 -121919913 - AluSx SINE Alu -19 293 1 733 264 77 23 chr5 77710536 77710797 -121919353 - MLT1J LTR MaLR -236 275 1 2331 197 104 43 chr5 77711499 77712561 -121917589 - MER69 DNA AcHobo 0 2526 120 256 268 99 0 chr5 77712596 77712667 -121917483 - LTR16A LTR ERVL -5 445 368 996 144 72 56 chr5 77712705 77712957 -121917193 - L1MA8 LINE L1 -4 6308 6047 2254 110 0 0 chr5 77712970 77713278 -121916872 - AluSg SINE Alu -2 308 1 1062 141 55 37 chr5 77713303 77713609 -121916541 - LTR54B LTR ERV1 -45 453 119 1434 119 71 51 chr5 77713609 77713903 -121916247 - L1M1 LINE L1 -4062 3503 3204 13895 95 11 1 chr5 77713903 77716684 -121913466 + L1PA7 LINE L1 3363 6154 0 2430 126 8 0 chr5 77716684 77717056 -121913094 + L1PB2 LINE L1 5769 6151 0 14636 176 20 10 chr5 77717057 77720782 -121909368 + L1MA3 LINE L1 2209 5977 -328 2159 152 16 13 chr5 77720782 77721156 -121908994 + THE1C LTR MaLR 1 375 0 4292 126 6 50 chr5 77721156 77721884 -121908266 + THE1C-int LTR MaLR 1 696 -884 2201 115 17 0 chr5 77721890 77722238 -121907912 + L1MA3 LINE L1 5951 6304 -1 21 0 0 0 chr5 77722268 77722289 -121907861 + AT_rich Low_complexity Low_complexity 1 21 0 8156 135 16 5 chr5 77722357 77724326 -121905824 - L1PA13 LINE L1 -273 5901 3929 408 74 0 0 chr5 77724326 77724380 -121905770 - MLT2A1 LTR ERVL 0 444 391 307 286 0 22 chr5 77724383 77724474 -121905676 + L1MC4 LINE L1 6614 6702 -1340 1852 119 29 7 chr5 77724475 77724752 -121905398 - MLT2A1 LTR ERVL -42 402 120 429 20 0 0 chr5 77724776 77724826 -121905324 + (CA)n Simple_repeat Simple_repeat 1 50 0 260 299 11 23 chr5 77724826 77724913 -121905237 + MLT1J LTR MaLR 110 195 -316 27 0 0 0 chr5 77724979 77725006 -121905144 + AT_rich Low_complexity Low_complexity 1 27 0 42798 51 1 2 chr5 77725008 77731149 -121899001 - L1PA4 LINE L1 -9 6146 7 11043 107 5 2 chr5 77731148 77732711 -121897439 - L1P LINE L1 -4579 1567 1 * 240 59 0 0 chr5 77732777 77732811 -121897339 + (TG)n Simple_repeat Simple_repeat 1 34 0 891 188 94 5 chr5 77733695 77733887 -121896263 + MER58A DNA MER1_type 1 209 -15 3108 142 15 13 chr5 77734687 77735115 -121895035 + L1P LINE L1 3499 3930 -2216 3044 103 23 5 chr5 77735115 77735551 -121894599 + MLT2A1 LTR ERVL 1 444 0 3108 142 15 13 chr5 77735551 77735658 -121894492 + L1P LINE L1 3930 4035 -2111 1682 214 60 38 chr5 77737222 77737690 -121892460 + MLT1D LTR MaLR 1 538 -29 2325 110 0 10 chr5 77739872 77740181 -121889969 - AluSx SINE Alu -6 306 1 594 246 24 12 chr5 77740527 77740694 -121889456 - LTR16A LTR ERVL -26 424 256 465 296 8 23 chr5 77740749 77740881 -121889269 - MIR SINE MIR -85 177 48 1964 103 3 31 chr5 77741005 77741326 -121888824 - L1PB1 LINE L1 0 6151 5840 3095 140 54 5 chr5 77741551 77741653 -121888497 - L1MC3 LINE L1 0 7785 7689 2197 110 0 0 chr5 77741653 77741943 -121888207 + AluSq SINE Alu 8 297 -16 3095 140 54 5 chr5 77741943 77742417 -121887733 - L1MC3 LINE L1 -96 7689 7181 238 273 0 0 chr5 77742418 77742484 -121887666 - MLT1F1 LTR MaLR -451 116 51 315 146 18 0 chr5 77742484 77742539 -121887611 - L1MC3 LINE L1 -668 7117 7062 * 4107 164 46 22 chr5 77742538 77743058 -121887092 - L1MC3 LINE L1 -1354 6431 5880 2369 97 0 0 chr5 77743058 77743357 -121886793 - AluSq SINE Alu -14 299 1 4107 164 46 22 chr5 77743357 77743726 -121886424 - L1MC3 LINE L1 -1905 5880 5521 5626 152 38 2 chr5 77744093 77746248 -121883902 + L1PBa LINE L1 6 2429 -4434 442 273 86 49 chr5 77746733 77747037 -121883113 + L1MC4a LINE L1 5615 5929 -1879 4820 180 40 38 chr5 77748221 77748745 -121881405 - Tigger6a DNA MER2_type -514 1083 561 1536 198 40 0 chr5 77748745 77748865 -121881285 + AluJb SINE Alu 1 115 -202 180 0 0 0 chr5 77748865 77748885 -121881265 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1536 198 40 0 chr5 77748885 77749070 -121881080 + AluJb SINE Alu 115 317 0 4820 180 40 38 chr5 77749070 77749624 -121880526 - Tigger6a DNA MER2_type -1036 561 1 1891 236 39 2 chr5 77749624 77750111 -121880039 + L1ME3A LINE L1 5643 6147 -23 1616 163 21 70 chr5 77750505 77750891 -121879259 - MLT1A2 LTR MaLR -7 367 1 229 288 80 24 chr5 77750891 77751016 -121879134 - HAL1 LINE L1 -217 2290 2159 467 333 66 56 chr5 77751063 77751489 -121878661 + L2 LINE L2 2842 3271 -1 1201 163 0 96 chr5 77751493 77751732 -121878418 + AluJb SINE Alu 87 302 -10 981 128 30 59 chr5 77752926 77753129 -121877021 + MER21A LTR ERV1 1 197 -734 * 1472 154 13 121 chr5 77753121 77753780 -121876370 + MER39 LTR ERV1 179 700 -199 460 290 82 25 chr5 77753774 77754019 -121876131 + MLT1J LTR MaLR 253 511 0 * 626 221 8 15 chr5 77754260 77754391 -121875759 + FLAM_A SINE Alu 1 130 -3 311 267 67 19 chr5 77755152 77755258 -121874892 + MIR3 SINE MIR 78 189 -19 970 163 0 13 chr5 77755536 77755689 -121874461 - FRAM SINE Alu -23 153 3 241 233 17 0 chr5 77755988 77756048 -121874102 + L1ME LINE L1 48 108 -5962 531 265 5 5 chr5 77756552 77756741 -121873409 + L1ME LINE L1 699 887 -5183 1863 163 16 23 chr5 77756821 77757128 -121873022 - AluJb SINE Alu -7 305 1 1785 239 64 5 chr5 77757128 77757755 -121872395 + L1ME LINE L1 2610 3273 -2807 1297 230 3 15 chr5 77757752 77758087 -121872063 - L1M4 LINE L1 -1169 4977 4647 * 796 254 91 18 chr5 77758088 77758419 -121871731 + L1ME1 LINE L1 5788 6142 -24 1422 277 69 60 chr5 77759858 77760430 -121869720 - L2 LINE L2 0 3313 2748 2325 151 67 5 chr5 77760430 77760833 -121869317 + MSTA LTR MaLR 1 428 0 1422 277 69 60 chr5 77760833 77760974 -121869176 - L2 LINE L2 -565 2748 2610 1798 177 33 28 chr5 77760974 77761336 -121868814 + THE1B LTR MaLR 1 364 0 1422 277 69 60 chr5 77761336 77761575 -121868575 - L2 LINE L2 -703 2610 2357 185 77 0 103 chr5 77761590 77761629 -121868521 - L2 LINE L2 -1157 2157 2123 683 287 107 14 chr5 77761944 77762373 -121867777 - MARNA DNA Mariner -21 565 97 180 279 33 33 chr5 77762473 77762534 -121867616 - MIR SINE MIR -129 79 19 673 290 14 28 chr5 77763234 77763451 -121866699 + ERVL LTR ERVL 4343 4556 -1208 463 38 0 75 chr5 77763757 77763837 -121866313 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 2369 144 32 2 chr5 77763938 77764347 -121865803 + MSTB LTR MaLR 6 426 0 359 272 40 79 chr5 77764349 77764474 -121865676 + L2 LINE L2 2201 2317 -997 2123 159 72 5 chr5 77764474 77764877 -121865273 - MSTB1 LTR MaLR 0 432 3 359 272 40 79 chr5 77764877 77764953 -121865197 + L2 LINE L2 2317 2394 -920 876 285 68 82 chr5 77765047 77765475 -121864675 + LTR16C LTR ERVL 70 491 0 509 63 0 0 chr5 77765862 77765928 -121864222 - L1PA3 LINE L1 -2130 4016 3948 11562 28 0 0 chr5 77765928 77768056 -121862094 + L1PA3 LINE L1 4023 6150 -5 509 63 0 0 chr5 77768056 77768067 -121862083 - L1P LINE L1 -2197 3949 3939 1635 351 40 20 chr5 77768475 77769538 -121860612 + ERVL LTR ERVL 2064 3148 -2616 440 303 7 7 chr5 77769610 77769755 -121860395 + ERVL LTR ERVL 3280 3424 -2340 561 144 10 0 chr5 77769755 77769859 -121860291 + MLT2B1 LTR ERVL 1 105 -415 272 259 25 25 chr5 77770965 77771046 -121859104 - MER5B DNA MER1_type -89 89 9 1212 129 0 211 chr5 77771816 77772256 -121857894 + MER7A DNA MER2_type 1 345 -1 2028 178 26 5 chr5 77772496 77772923 -121857227 - Zaphod DNA AcHobo -1 4030 3595 * 2381 237 107 21 chr5 77772921 77773829 -121856321 - Zaphod DNA AcHobo -3041 990 5 401 254 148 32 chr5 77773881 77774070 -121856080 - MLT1K LTR MaLR -1 587 377 475 312 80 33 chr5 77774104 77774405 -121855745 - MLT1K LTR MaLR -254 334 20 16308 88 7 0 chr5 77775205 77775358 -121854792 + L1PA7 LINE L1 2929 3079 -3075 4545 26 4 2 chr5 77775358 77775859 -121854291 + SVA Other Other 885 1386 0 16308 88 7 0 chr5 77775859 77778895 -121851255 + L1PA7 LINE L1 3079 6139 -15 265 143 20 31 chr5 77778895 77778993 -121851157 + (TA)n Simple_repeat Simple_repeat 1 97 0 2181 114 0 10 chr5 77779185 77779482 -121850668 + AluSx SINE Alu 1 294 -18 4752 112 32 11 chr5 77780600 77781388 -121848762 + L1PA16 LINE L1 5362 6165 -1 714 257 17 38 chr5 77782670 77782907 -121847243 - ERVL LTR ERVL -1202 4562 4331 372 289 109 38 chr5 77783440 77783779 -121846371 - L1ME LINE L1 -393 5771 5409 493 307 42 18 chr5 77783780 77783946 -121846204 - MIR SINE MIR -88 174 5 2202 115 3 0 chr5 77784428 77784724 -121845426 - AluSx SINE Alu -15 297 1 182 301 0 65 chr5 77785222 77785315 -121844835 + L2 LINE L2 3185 3271 -1 314 308 186 4 chr5 77785560 77785813 -121844337 + L1M4 LINE L1 4493 4791 -1355 2169 201 38 0 chr5 77785814 77786412 -121843738 - L1ME LINE L1 -386 6573 5955 * 5384 94 20 17 chr5 77786409 77787249 -121842901 - L1P LINE L1 -1409 4737 3895 3608 129 9 0 chr5 77788927 77789496 -121840654 - L1P LINE L1 -2259 3887 3314 6353 92 17 0 chr5 77789493 77790855 -121839295 + L1PA10 LINE L1 4788 6164 -4 434 275 56 0 chr5 77790857 77791017 -121839133 - L1ME LINE L1 -974 5967 5799 * 2407 233 124 35 chr5 77791016 77792060 -121838090 - L1MEc LINE L1 -3113 3828 2756 880 281 129 59 chr5 77792067 77792572 -121837578 - L1MEc LINE L1 -5827 596 57 691 278 131 54 chr5 77792638 77793027 -121837123 - LTR33A LTR ERVL -92 431 13 519 228 85 50 chr5 77793051 77793310 -121836840 - HAL1 LINE L1 -153 2354 2087 1692 186 0 30 chr5 77793322 77793617 -121836533 + AluJb SINE Alu 1 286 -26 4321 160 44 16 chr5 77793627 77794446 -121835704 - L1MB2 LINE L1 -4 6167 5326 3037 199 31 16 chr5 77794451 77795156 -121834994 - L1MB2 LINE L1 -1512 4634 3919 801 275 121 20 chr5 77795175 77795521 -121834629 - HAL1 LINE L1 -436 2071 1691 438 187 66 0 chr5 77795518 77795620 -121834530 - L1MCa LINE L1 -894 1893 1560 * 3023 129 51 2 chr5 77795620 77796092 -121834058 - LTR69 LTR ERVL -80 508 14 7333 32 0 0 chr5 77796111 77797360 -121832790 - L1PA4 LINE L1 -1 6154 4909 2072 44 66 0 chr5 77797360 77797629 -121832521 - L1PA4 LINE L1 -4 6151 5862 1184 194 80 38 chr5 77797678 77798151 -121831999 - HAL1 LINE L1 -1035 1472 980 25 0 0 0 chr5 77798214 77798239 -121831911 + AT_rich Low_complexity Low_complexity 1 25 0 1960 147 89 31 chr5 77798239 77798693 -121831457 - L1MA8 LINE L1 -5 6286 5804 365 281 72 88 chr5 77798683 77799056 -121831094 - HAL1 LINE L1 -2097 410 44 * 28 29 0 0 chr5 77799093 77799128 -121831022 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 77799196 77799221 -121830929 + AT_rich Low_complexity Low_complexity 1 25 0 239 198 85 75 chr5 77799737 77799843 -121830307 + L1ME4a LINE L1 5994 6100 -21 1034 260 113 36 chr5 77800114 77800634 -121829516 + MLT1G LTR MaLR 26 585 -5 1550 221 199 16 chr5 77800654 77801151 -121828999 - MLT1G LTR MaLR -2 588 1 306 0 0 0 chr5 77802024 77802058 -121828092 + (TG)n Simple_repeat Simple_repeat 1 34 0 829 130 8 0 chr5 77802058 77802181 -121827969 - AluSg/x SINE Alu -33 277 154 846 208 12 6 chr5 77802234 77802407 -121827743 + AluJb SINE Alu 137 310 -2 315 104 0 0 chr5 77802639 77802687 -121827463 + (TTCC)n Simple_repeat Simple_repeat 2 49 0 601 288 57 26 chr5 77804921 77805150 -121825000 + MIR SINE MIR 1 236 -26 334 209 198 0 chr5 77805246 77805332 -121824818 + L2 LINE L2 3211 3313 0 2849 121 18 29 chr5 77806691 77806732 -121823418 - MER83 LTR ERV1 0 448 408 502 45 0 0 chr5 77806732 77806799 -121823351 + L1PA5 LINE L1 6085 6151 -3 2849 121 18 29 chr5 77806799 77807210 -121822940 - MER83 LTR ERV1 -40 408 1 2130 72 0 72 chr5 77807796 77808114 -121822036 - AluY SINE Alu -16 295 1 2030 65 0 4 chr5 77808209 77808470 -121821680 + L1PA7 LINE L1 5887 6146 -8 560 323 31 31 chr5 77808526 77808802 -121821348 + L1MEc LINE L1 1429 1707 -4689 1630 68 0 5 chr5 77808802 77809007 -121821143 + AluY SINE Alu 108 311 0 560 323 31 31 chr5 77809007 77809120 -121821030 + L1MEc LINE L1 1706 1818 -4578 376 248 131 10 chr5 77809177 77809375 -121820775 + L1MEc LINE L1 1919 2140 -4256 2480 57 0 0 chr5 77809426 77809726 -121820424 + AluY SINE Alu 1 300 -11 348 59 0 0 chr5 77809728 77809779 -121820371 + Alu SINE Alu 251 301 0 600 175 88 52 chr5 77809806 77810000 -121820150 + MER69 DNA AcHobo 2179 2379 -147 21 0 0 0 chr5 77810032 77810053 -121820097 + AT_rich Low_complexity Low_complexity 1 21 0 1829 233 210 14 chr5 77810055 77811585 -121818565 - L1ME1 LINE L1 -31 6135 4226 1182 124 15 30 chr5 77811597 77811798 -121818352 + Tigger1 DNA MER2_type 34 231 -2187 11450 149 20 10 chr5 77811811 77813107 -121817043 - L1MA2 LINE L1 -1 6303 5021 2463 66 0 3 chr5 77813107 77813408 -121816742 - AluY SINE Alu -11 300 1 11450 149 20 10 chr5 77813408 77815294 -121814856 - L1MA2 LINE L1 -1283 5021 3088 504 139 0 0 chr5 77815584 77815670 -121814480 + L1 LINE L1 4125 4210 -1936 542 142 35 0 chr5 77815674 77815787 -121814363 + LTR14C LTR ERVK 1 117 -470 363 293 62 34 chr5 77815793 77816001 -121814149 - L1ME1 LINE L1 -2841 3305 3092 3708 75 2 2 chr5 77816101 77816580 -121813570 + LTR14C LTR ERVK 109 587 0 6094 151 65 30 chr5 77816583 77816784 -121813366 + L1PA16 LINE L1 4213 4405 -1761 362 0 0 0 chr5 77816784 77816826 -121813324 + MADE1 DNA Mariner 1 42 -38 6094 151 65 30 chr5 77816826 77818450 -121811700 + L1PA16 LINE L1 4405 6156 -10 1087 193 86 39 chr5 77819565 77819694 -121810456 + MER63B DNA MER1_type 11 133 -929 761 111 8 0 chr5 77819694 77819811 -121810339 + L1PB2 LINE L1 6034 6151 0 1087 193 86 39 chr5 77819811 77819961 -121810189 + MER63B DNA MER1_type 133 303 -133 23 33 0 0 chr5 77820712 77820742 -121809408 + AT_rich Low_complexity Low_complexity 1 30 0 420 20 0 0 chr5 77820781 77820830 -121809320 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 302 364 49 23 chr5 77820856 77821161 -121808989 + MERVL LTR ERVL 397 709 -4287 1573 308 70 24 chr5 77821181 77822462 -121807688 + MERVL LTR ERVL 2883 4209 -1297 454 350 26 10 chr5 77822823 77823017 -121807133 - MIR SINE MIR -17 245 49 573 312 104 46 chr5 77824321 77824648 -121805502 - L2 LINE L2 0 3272 2927 473 200 211 5 chr5 77824945 77825135 -121805015 + MER110 LTR ERV1 38 266 -225 11167 131 17 50 chr5 77825421 77827350 -121802800 + L1M1 LINE L1 992 2855 -4710 630 299 80 33 chr5 77827344 77827768 -121802382 + L1ME LINE L1 3614 4057 -2089 * 23 0 0 0 chr5 77827870 77827893 -121802257 + AT_rich Low_complexity Low_complexity 1 23 0 233 217 0 14 chr5 77827984 77827993 -121802157 + (TA)n Simple_repeat Simple_repeat 2 10 -59 2146 106 0 0 chr5 77827993 77828275 -121801875 + AluSc SINE Alu 1 282 -27 233 217 0 14 chr5 77828275 77828334 -121801816 + (TA)n Simple_repeat Simple_repeat 10 69 0 644 58 12 0 chr5 77828342 77828428 -121801722 - L1PA3 LINE L1 -5 6150 6064 43 35 0 0 chr5 77828433 77828490 -121801660 + AT_rich Low_complexity Low_complexity 1 57 0 289 100 17 17 chr5 77828511 77828571 -121801579 + (TA)n Simple_repeat Simple_repeat 2 61 0 285 285 64 34 chr5 77828579 77828877 -121801273 + L1ME LINE L1 4343 4649 -1497 301 346 45 39 chr5 77828941 77829228 -121800922 + L1ME LINE L1 4748 5039 -1107 1265 45 0 0 chr5 77829228 77829384 -121800766 + L1PA4 LINE L1 5997 6152 -3 301 346 45 39 chr5 77829384 77829405 -121800745 + L1ME LINE L1 5039 5058 -1088 283 302 72 23 chr5 77829703 77830133 -121800017 + L1ME LINE L1 5290 5738 -383 11113 171 10 2 chr5 77830168 77831512 -121798638 + L1PA14 LINE L1 3283 4615 -1546 207 69 0 0 chr5 77831512 77831541 -121798609 + (CAA)n Simple_repeat Simple_repeat 1 29 0 11113 171 10 2 chr5 77831541 77833049 -121797101 + L1PA14 LINE L1 4615 6158 -3 2542 221 77 26 chr5 77833067 77834150 -121796000 + L1MEc LINE L1 1868 2973 -3242 502 92 0 0 chr5 77834195 77834260 -121795890 + MSTB LTR MaLR 1 65 -361 378 115 0 0 chr5 77834260 77834321 -121795829 - L1P4 LINE L1 -628 5533 5473 326 195 0 0 chr5 77834318 77834395 -121795755 + L1MEc LINE L1 2973 3049 -3166 * 675 185 14 0 chr5 77834422 77834568 -121795582 + L1MB7 LINE L1 6030 6177 -7 291 338 79 7 chr5 77834680 77834819 -121795331 - MIR SINE MIR -3 259 111 2342 123 58 18 chr5 77835276 77835674 -121794476 - MSTB LTR MaLR -12 414 1 8684 174 31 9 chr5 77835674 77837289 -121792861 - MSTB-int LTR MaLR 0 1651 1 2477 137 42 2 chr5 77837289 77837699 -121792451 - MSTB LTR MaLR 0 426 1 447 248 93 0 chr5 77837743 77837872 -121792278 + MIR SINE MIR 122 262 0 6603 25 1 0 chr5 77837937 77838712 -121791438 - L1PA3 LINE L1 -1662 4484 3709 * 6859 34 48 40 chr5 77838705 77840382 -121789768 + L1PA3 LINE L1 4475 6155 0 1147 120 0 0 chr5 77841167 77841334 -121788816 + L1MA6 LINE L1 6134 6300 0 1032 270 117 3 chr5 77841813 77842120 -121788030 + LTR40a LTR ERVL 67 408 -111 670 189 0 9 chr5 77842130 77842241 -121787909 - FAM SINE Alu -71 114 5 576 157 139 9 chr5 77842244 77842352 -121787798 + LTR40a LTR ERVL 398 519 0 954 273 44 49 chr5 77842357 77842724 -121787426 - LTR16A LTR ERVL -23 427 63 220 349 0 0 chr5 77843120 77843183 -121786967 - L2 LINE L2 -9 3263 3201 284 206 15 29 chr5 77843319 77843387 -121786763 - MLT1L LTR MaLR -1 614 548 438 295 18 0 chr5 77843395 77843507 -121786643 - MER81 DNA DNA 0 114 1 362 197 45 0 chr5 77843508 77843574 -121786576 - HERV16 LTR ERVL -2020 2976 2908 24 0 0 0 chr5 77843574 77843598 -121786552 + AT_rich Low_complexity Low_complexity 1 24 0 2389 147 8 8 chr5 77843601 77843996 -121786154 - L1MA8 LINE L1 0 6291 5897 828 281 28 0 chr5 77843997 77844214 -121785936 - HERV16 LTR ERVL -2078 2918 2696 211 152 15 76 chr5 77844272 77844338 -121785812 + A-rich Low_complexity Low_complexity 2 63 0 28 0 0 0 chr5 77844858 77844886 -121785264 + AT_rich Low_complexity Low_complexity 1 28 0 516 302 57 56 chr5 77844888 77845188 -121784962 + L2 LINE L2 2768 3067 -246 1970 126 79 58 chr5 77845367 77845620 -121784530 - MLT1B LTR MaLR 0 390 125 4324 43 12 4 chr5 77845620 77846126 -121784024 - L1PA8 LINE L1 -2 6170 5661 1970 126 79 58 chr5 77846126 77846252 -121783898 - MLT1B LTR MaLR -265 125 3 228 255 0 0 chr5 77846255 77846302 -121783848 + L2 LINE L2 3267 3313 0 271 293 26 35 chr5 77846368 77846484 -121783666 - MER5B DNA MER1_type -62 116 2 5020 136 21 18 chr5 77848787 77849708 -121780442 - L1PA16 LINE L1 0 6166 5403 1496 298 32 43 chr5 77849817 77850747 -121779403 - HAL1 LINE L1 -815 1692 773 332 298 70 82 chr5 77851143 77851314 -121778836 - HAL1 LINE L1 -2286 221 53 1925 224 6 3 chr5 77851792 77852154 -121777996 + MLT1A1 LTR MaLR 1 363 -2 1470 192 117 35 chr5 77852922 77853344 -121776806 + MER66A LTR ERV1 98 478 0 227 291 126 19 chr5 77853346 77853449 -121776701 + MIR SINE MIR 1 114 -148 844 200 0 20 chr5 77853546 77853696 -121776454 + AluJo SINE Alu 1 147 -165 42016 48 3 1 chr5 77853698 77858803 -121771347 + L1P LINE L1 7 5122 -1024 648 125 0 0 chr5 77858903 77859007 -121771143 - L1P LINE L1 -806 5360 5257 2464 130 11 11 chr5 77859094 77859455 -121770695 + L1PA16 LINE L1 5806 6166 0 569 328 110 14 chr5 77859533 77859878 -121770272 - L2 LINE L2 -337 2977 2600 6073 217 40 13 chr5 77859880 77860824 -121769326 + L1M4 LINE L1 5 995 -5547 198 103 0 0 chr5 77860824 77860853 -121769297 + (CAA)n Simple_repeat Simple_repeat 2 30 0 6073 217 40 13 chr5 77860853 77861194 -121768956 + L1M4 LINE L1 995 1325 -5217 230 339 105 0 chr5 77861252 77861376 -121768774 - L2 LINE L2 -3136 178 42 44588 42 1 5 chr5 77861748 77867920 -121762230 - L1PA3 LINE L1 0 6155 8 218 292 97 0 chr5 77868099 77868171 -121761979 + MIR3 SINE MIR 122 200 -8 355 310 48 83 chr5 77868619 77868848 -121761302 - MIR SINE MIR -16 246 26 309 295 62 18 chr5 77868881 77868993 -121761157 - MIR3 SINE MIR -5 203 87 25 31 0 0 chr5 77869053 77869085 -121761065 + AT_rich Low_complexity Low_complexity 1 32 0 252 0 0 0 chr5 77870055 77870083 -121760067 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 270 0 0 0 chr5 77870086 77870116 -121760034 + (GA)n Simple_repeat Simple_repeat 2 31 0 1096 249 72 7 chr5 77871512 77871805 -121758345 + MLT1C LTR MaLR 7 318 -149 761 207 70 23 chr5 77871844 77872001 -121758149 + MLT1C LTR MaLR 322 461 -6 1034 180 92 29 chr5 77872478 77872684 -121757466 + MER20 DNA MER1_type 1 219 0 255 311 19 56 chr5 77872688 77872849 -121757301 - MLT1K LTR MaLR -296 292 138 1760 165 49 85 chr5 77873749 77874174 -121755976 - L1MB8 LINE L1 -38 6140 5731 197 287 59 59 chr5 77874666 77874767 -121755383 - MIR SINE MIR -50 212 112 285 298 25 66 chr5 77875647 77875768 -121754382 + L2 LINE L2 3198 3313 0 833 127 71 0 chr5 77875842 77875968 -121754182 + AluJb SINE Alu 3 137 -175 1015 161 35 0 chr5 77878015 77878189 -121751961 + AluJb SINE Alu 120 299 -13 437 305 127 21 chr5 77880411 77880509 -121749641 - MIR SINE MIR 0 262 176 2575 121 34 17 chr5 77880509 77880865 -121749285 - THE1B LTR MaLR -2 362 1 437 305 127 21 chr5 77880865 77881002 -121749148 - MIR SINE MIR -86 176 2 699 192 17 0 chr5 77881879 77882056 -121748094 + CT-rich Low_complexity Low_complexity 1 180 0 211 256 11 22 chr5 77882289 77882379 -121747771 + G-rich Low_complexity Low_complexity 6 94 0 245 215 13 44 chr5 77882379 77882608 -121747542 + (CGGGG)n Simple_repeat Simple_repeat 1 221 0 341 235 35 35 chr5 77882631 77882746 -121747404 - AluSq/x SINE Alu -182 120 6 1482 244 35 27 chr5 77882770 77883176 -121746974 + LTR16C LTR ERVL 83 491 0 3277 90 18 7 chr5 77883491 77883947 -121746203 + L1MA1 LINE L1 5842 6302 0 247 291 68 48 chr5 77884025 77884128 -121746022 + L2 LINE L2 3168 3272 0 295 192 0 0 chr5 77884133 77884185 -121745965 - MIR SINE MIR -154 108 57 1189 203 160 16 chr5 77885395 77885765 -121744385 + MER110A LTR ERV1 71 471 -1 198 103 0 0 chr5 77887847 77887876 -121742274 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 244 321 170 0 chr5 77887879 77887985 -121742165 - L2 LINE L2 -12 3260 3137 23 0 0 0 chr5 77888340 77888363 -121741787 + AT_rich Low_complexity Low_complexity 1 23 0 249 317 6 55 chr5 77888363 77888527 -121741623 + L1ME LINE L1 5420 5575 -546 783 260 185 38 chr5 77888532 77888905 -121741245 + MLT1J2 LTR MaLR 1 428 -22 509 135 22 0 chr5 77888935 77889024 -121741126 - MIR SINE MIR -108 154 64 6159 136 20 4 chr5 77889026 77890393 -121739757 + L1PB2 LINE L1 4771 6151 0 21 0 0 0 chr5 77890439 77890460 -121739690 + AT_rich Low_complexity Low_complexity 1 21 0 203 260 156 62 chr5 77890472 77890568 -121739582 - MIR SINE MIR -156 106 2 39 74 0 0 chr5 77891663 77891744 -121738406 + AT_rich Low_complexity Low_complexity 1 81 0 185 353 29 0 chr5 77891779 77891847 -121738303 + L3b LINE CR1 1422 1491 -92 3480 130 18 44 chr5 77893172 77893832 -121736318 + L1MA10 LINE L1 5692 6334 0 790 168 25 0 chr5 77894056 77894217 -121735933 - L1MB4 LINE L1 -1 6179 6015 275 327 19 31 chr5 77896039 77896201 -121733949 + CT-rich Low_complexity Low_complexity 3 162 0 1962 156 7 0 chr5 77896832 77897127 -121733023 + AluSx SINE Alu 1 297 -15 308 364 49 14 chr5 77897246 77897389 -121732761 + MIR3 SINE MIR 14 161 -47 353 316 53 0 chr5 77897841 77897993 -121732157 + L2 LINE L2 2534 2693 -621 731 239 98 57 chr5 77898091 77898346 -121731804 + LTR16A LTR ERVL 61 333 -117 2021 188 63 29 chr5 77898346 77898836 -121731314 - MER9 LTR ERVK 0 511 5 731 239 98 57 chr5 77898836 77898898 -121731252 + LTR16A LTR ERVL 333 391 -59 729 307 58 82 chr5 77898903 77899445 -121730705 + L2 LINE L2 2787 3312 -1 343 277 157 60 chr5 77899991 77900157 -121729993 - MIR SINE MIR -48 214 33 1941 127 40 3 chr5 77900266 77900565 -121729585 - AluSg SINE Alu 0 310 1 7267 41 3 0 chr5 77901040 77902095 -121728055 + L1PA4 LINE L1 5096 6152 -3 1176 165 11 0 chr5 77902100 77902282 -121727868 + FRAM SINE Alu 1 176 0 194 128 26 0 chr5 77902824 77902863 -121727287 + (TTA)n Simple_repeat Simple_repeat 2 41 0 580 285 168 5 chr5 77903564 77903778 -121726372 - MIR SINE MIR -12 250 2 261 57 0 0 chr5 77905031 77905066 -121725084 + (TC)n Simple_repeat Simple_repeat 2 36 0 229 286 0 0 chr5 77905646 77905716 -121724434 + L1 LINE L1 4028 4097 -2049 22 88 0 0 chr5 77905803 77905860 -121724290 + AT_rich Low_complexity Low_complexity 1 57 0 1671 198 136 7 chr5 77905880 77906320 -121723830 + LTR54B LTR ERV1 1 497 -1 2166 301 59 5 chr5 77906411 77907213 -121722937 + L2 LINE L2 1399 2243 -1071 474 286 0 35 chr5 77907215 77907446 -121722704 + HsTC2 DNA Tc2 4 217 -1681 369 219 67 0 chr5 77907447 77907552 -121722598 + HsTC2 DNA Tc2 497 608 -1290 303 203 34 0 chr5 77907572 77907631 -121722519 + AluS SINE Alu 1 61 -242 779 148 0 0 chr5 77907636 77907758 -121722392 + AluJb SINE Alu 178 299 -13 15725 154 10 5 chr5 77907758 77910759 -121719391 + L1PA12 LINE L1 2251 5275 -893 2055 32 0 8 chr5 77910759 77911005 -121719145 + L1PA2 LINE L1 5907 6155 0 15725 154 10 5 chr5 77911005 77911858 -121718292 + L1PA12 LINE L1 5275 6123 -45 601 89 0 0 chr5 77911908 77911998 -121718152 + L1PA13 LINE L1 6071 6160 -3 405 257 125 0 chr5 77911998 77912142 -121718008 + HsTC2 DNA Tc2 578 739 -1159 413 180 23 55 chr5 77912144 77912272 -121717878 + HsTC2 DNA Tc2 1283 1582 -316 300 278 138 91 chr5 77912529 77912892 -121717258 + MLT1H LTR MaLR 107 486 -63 193 360 33 20 chr5 77912892 77913042 -121717108 + L3 LINE CR1 1238 1389 -188 444 224 105 56 chr5 77913109 77913252 -121716898 - MIR SINE MIR -21 241 92 231 129 247 65 chr5 77913253 77913285 -121716865 - MLT2C2 LTR ERVL 0 399 374 633 53 61 0 chr5 77913285 77913399 -121716751 + (TCTA)n Simple_repeat Simple_repeat 1 121 0 231 129 247 65 chr5 77913399 77913459 -121716691 - MLT2C2 LTR ERVL -25 374 288 14263 169 20 29 chr5 77913559 77917560 -121712590 + L1P5 LINE L1 2519 6510 -357 345 60 12 60 chr5 77917567 77917650 -121712500 + (TA)n Simple_repeat Simple_repeat 2 80 0 361 235 101 25 chr5 78017709 78017828 -121612322 - MIR SINE MIR -119 143 16 351 244 92 34 chr5 78018203 78018322 -121611828 + MIR SINE MIR 120 245 -17 277 314 159 0 chr5 78018327 78018572 -121611578 - LTR16A1 LTR ERVL -14 443 160 376 252 25 17 chr5 78019333 78019452 -121610698 - MIR SINE MIR -26 236 117 21 36 0 0 chr5 78020603 78020631 -121609519 + AT_rich Low_complexity Low_complexity 1 28 0 3555 175 19 27 chr5 78021102 78021844 -121608306 + L1MB3 LINE L1 5444 6179 -4 333 308 56 0 chr5 78021856 78021999 -121608151 - L1ME4a LINE L1 -40 6081 5931 402 260 29 10 chr5 78022149 78022253 -121607897 + Charlie1 DNA MER1_type 2 107 -2654 8402 37 9 6 chr5 78022254 78023373 -121606777 - L1PA3 LINE L1 -2198 3948 2827 12175 24 0 0 chr5 78023373 78025623 -121604527 + L1PA3 LINE L1 3962 6210 0 493 237 52 0 chr5 78025651 78025786 -121604364 + Charlie1 DNA MER1_type 96 237 -2524 985 152 11 0 chr5 78025786 78025970 -121604180 - L1MA6 LINE L1 -12 6288 6103 553 145 23 38 chr5 78025998 78026129 -121604021 + Charlie1 DNA MER1_type 2632 2760 -1 204 122 0 0 chr5 78026188 78026229 -121603921 + (T)n Simple_repeat Simple_repeat 1 41 0 429 290 195 23 chr5 78026699 78026932 -121603218 - L1ME4a LINE L1 -225 5896 5704 2162 139 0 3 chr5 78026932 78027235 -121602915 - AluSx SINE Alu -10 302 1 429 290 195 23 chr5 78027235 78027443 -121602707 - L1ME4a LINE L1 -417 5704 5379 1005 240 107 33 chr5 78027481 78027910 -121602240 + MLT1C LTR MaLR 1 467 0 380 310 114 12 chr5 78028300 78028545 -121601605 - L1ME4a LINE L1 -1329 4817 4548 21 82 0 0 chr5 78028648 78028697 -121601453 + AT_rich Low_complexity Low_complexity 1 49 0 555 280 65 20 chr5 78029521 78029721 -121600429 - L2 LINE L2 -2 3311 3103 270 193 35 7 chr5 78029730 78029853 -121600297 + MER3 DNA MER1_type 1 209 0 301 277 227 18 chr5 78029861 78030182 -121599968 - L2 LINE L2 -226 3087 2714 231 233 0 50 chr5 78030874 78030934 -121599216 + MIR SINE MIR 36 92 -170 246 128 0 0 chr5 78031976 78032015 -121598135 + (TG)n Simple_repeat Simple_repeat 1 39 0 965 263 164 20 chr5 78033228 78033885 -121596265 + L2 LINE L2 2551 3311 -2 483 205 90 0 chr5 78033892 78034014 -121596136 + MER103 DNA DNA 26 158 -8 271 281 167 69 chr5 78034887 78035075 -121595075 - MIR3 SINE MIR -50 212 11 1544 200 99 25 chr5 78036015 78036450 -121593700 - MLT1C LTR MaLR 0 467 1 1804 147 42 3 chr5 78038069 78038354 -121591796 - AluSx SINE Alu -16 296 1 2821 263 70 24 chr5 78038959 78040204 -121589946 - L2 LINE L2 -32 3281 1983 1461 248 142 31 chr5 78040232 78040561 -121589589 - LTR50 LTR ERVL -52 743 452 1559 199 146 19 chr5 78040561 78040972 -121589178 - MLT1C LTR MaLR -1 466 4 1461 248 142 31 chr5 78040972 78041311 -121588839 - LTR50 LTR ERVL -343 452 1 214 189 0 0 chr5 78041311 78041348 -121588802 - L2 LINE L2 -1321 1993 1957 981 200 0 0 chr5 78041389 78041554 -121588596 + FAM SINE Alu 1 165 -10 233 245 0 0 chr5 78041554 78041607 -121588543 - L2 LINE L2 -1348 1966 1914 1184 201 4 0 chr5 78041913 78042172 -121587978 - L1M4 LINE L1 -2348 3798 3539 309 245 94 38 chr5 78042184 78042290 -121587860 + MIR SINE MIR 151 262 0 184 348 73 0 chr5 78043250 78043364 -121586786 + MIR SINE MIR 21 143 -65 310 285 49 106 chr5 78043493 78043739 -121586411 - L2 LINE L2 -176 3096 2865 420 300 62 25 chr5 78043812 78043972 -121586178 - L2 LINE L2 -573 2741 2576 378 259 69 63 chr5 78044324 78044498 -121585652 + L2 LINE L2 3121 3295 -18 1077 177 9 69 chr5 78044943 78045175 -121584975 + MER20 DNA MER1_type 1 218 -1 295 278 87 8 chr5 78045440 78045566 -121584584 - L3b LINE CR1 -258 1325 1190 270 0 0 0 chr5 78046552 78046582 -121583568 + (CA)n Simple_repeat Simple_repeat 2 31 0 1548 262 69 12 chr5 78048260 78048837 -121581313 - MER20B DNA MER1_type -39 744 135 1011 202 90 122 chr5 78048910 78049321 -121580829 - MLT2B1 LTR ERVL -16 398 1 333 211 32 32 chr5 78049467 78049562 -121580588 + MLT1G1 LTR MaLR 485 579 -16 612 179 173 0 chr5 78050632 78050794 -121579356 + L1MC2 LINE L1 6147 6336 -8 1287 188 28 38 chr5 78050826 78051224 -121578926 + L1ME2 LINE L1 4978 5371 -775 418 167 24 24 chr5 78051224 78051308 -121578842 + MLT1D LTR MaLR 1 84 -421 1537 229 58 14 chr5 78051310 78051755 -121578395 + L1ME2 LINE L1 5686 6150 -14 620 213 28 0 chr5 78051834 78051982 -121578168 - FLAM_A SINE Alu 0 151 1 487 245 92 36 chr5 78052706 78052902 -121577248 + L1ME3A LINE L1 5964 6170 0 383 272 60 22 chr5 78053897 78054081 -121576069 - L1MC4a LINE L1 -1922 5886 5696 472 184 35 0 chr5 78054154 78054241 -121575909 + 5S rRNA rRNA 31 120 -1 593 293 60 0 chr5 78055618 78055785 -121574365 - MER45A DNA AcHobo 0 178 2 315 333 24 16 chr5 78056030 78056156 -121573994 - MIR SINE MIR -48 214 88 5598 76 14 0 chr5 78056157 78056924 -121573226 + L1PA10 LINE L1 5387 6164 -4 344 243 14 128 chr5 78056972 78057120 -121573030 - L2 LINE L2 0 3313 3183 681 186 38 16 chr5 78057194 78057278 -121572872 + MER53 DNA DNA 1 82 -107 1722 181 70 6 chr5 78057278 78057621 -121572529 + MLT1A1 LTR MaLR 1 365 0 681 186 38 16 chr5 78057621 78057719 -121572431 + MER53 DNA DNA 82 187 -2 236 325 13 13 chr5 78057893 78057970 -121572180 - L2 LINE L2 -470 2844 2768 420 353 17 12 chr5 78058266 78058439 -121571711 + MER5A DNA MER1_type 16 189 0 202 274 78 0 chr5 78058952 78059003 -121571147 - MIR3 SINE MIR -15 193 139 297 0 0 0 chr5 78060094 78060127 -121570023 + (TG)n Simple_repeat Simple_repeat 2 34 0 335 251 21 66 chr5 78060195 78060367 -121569783 - MIR SINE MIR -27 181 36 226 211 0 0 chr5 78060377 78060415 -121569735 + polypyrimidine Low_complexity Low_complexity 1 38 0 309 323 103 72 chr5 78060933 78061628 -121568522 + L1M2 LINE L1 596 1260 -5589 221 209 0 0 chr5 78061711 78061754 -121568396 + L2 LINE L2 3225 3267 -5 575 159 30 0 chr5 78063321 78063453 -121566697 + GA-rich Low_complexity Low_complexity 1 136 0 224 185 0 31 chr5 78064387 78064452 -121565698 + (TTAA)n Simple_repeat Simple_repeat 1 63 0 197 378 37 22 chr5 78065309 78065444 -121564706 + MIR SINE MIR 120 256 -6 29 0 0 0 chr5 78066045 78066074 -121564076 + AT_rich Low_complexity Low_complexity 1 29 0 2103 295 29 6 chr5 78067395 78068016 -121562134 + L2 LINE L2 81 715 -2599 1432 189 46 37 chr5 78068480 78068914 -121561236 - L1MC5 LINE L1 -366 7595 7158 297 297 43 32 chr5 78069313 78069498 -121560652 + L1MEd LINE L1 574 760 -5359 663 275 113 32 chr5 78070540 78070973 -121559177 + MLT1L LTR MaLR 138 605 -10 235 281 18 0 chr5 78070980 78071037 -121559113 + L2 LINE L2 3246 3303 -10 3247 82 18 0 chr5 78072047 78072408 -121557742 - L1PB1 LINE L1 -1 6150 5778 399 89 0 0 chr5 78072408 78072464 -121557686 + (TA)n Simple_repeat Simple_repeat 1 56 0 3247 82 18 0 chr5 78072464 78072554 -121557596 - L1PB1 LINE L1 -373 5778 5691 2679 146 38 9 chr5 78072554 78073356 -121556794 + L1PB1 LINE L1 4844 5665 -486 189 341 73 24 chr5 78073547 78073670 -121556480 + L2 LINE L2 3182 3310 -3 333 47 0 0 chr5 78076076 78076119 -121554031 + (TG)n Simple_repeat Simple_repeat 1 43 0 196 155 17 17 chr5 78076119 78076177 -121553973 + GA-rich Low_complexity Low_complexity 2 59 0 305 305 79 42 chr5 78077483 78077890 -121552260 + L1P LINE L1 3724 4145 -2001 493 365 33 13 chr5 78077997 78078298 -121551852 + L1ME4a LINE L1 4280 4586 -1560 339 305 92 23 chr5 78078697 78078828 -121551322 + L1ME4a LINE L1 5296 5435 -686 189 0 0 0 chr5 78079137 78079158 -121550992 + (T)n Simple_repeat Simple_repeat 1 21 0 4667 35 0 12 chr5 78079337 78079905 -121550245 - L1PA5 LINE L1 -1 6153 5593 612 305 120 0 chr5 78079980 78080380 -121549770 + L1ME4a LINE L1 5567 6014 -107 590 334 58 54 chr5 78082223 78082723 -121547427 - LTR67 LTR ERVL -8 549 48 1543 170 8 102 chr5 78083372 78083772 -121546378 - MLT1A1 LTR MaLR 0 365 4 14192 126 20 29 chr5 78084600 78087032 -121543118 + Tigger1 DNA MER2_type 1 2410 -8 404 286 107 30 chr5 78088197 78088365 -121541785 - MIR SINE MIR -35 227 47 2360 48 0 0 chr5 78088433 78088725 -121541425 + L1PA5 LINE L1 5863 6154 0 15710 109 2 6 chr5 78088734 78091962 -121538188 + L1PA8 LINE L1 2926 6156 -16 1613 98 8 4 chr5 78091718 78091962 -121538188 + L1PA8 LINE L1 5912 6179 0 208 0 0 0 chr5 78091962 78091985 -121538165 + (CAA)n Simple_repeat Simple_repeat 2 180 0 34 0 0 0 chr5 78091998 78092032 -121538118 + AT_rich Low_complexity Low_complexity 1 34 0 32 57 0 0 chr5 78093033 78093086 -121537064 + AT_rich Low_complexity Low_complexity 1 53 0 310 277 130 50 chr5 78094121 78094814 -121535336 - L1ME4a LINE L1 -1 6120 5373 264 100 0 0 chr5 78095381 78095421 -121534729 + (GA)n Simple_repeat Simple_repeat 1 40 0 905 285 47 27 chr5 78095827 78096083 -121534067 - MIR SINE MIR -1 261 1 364 304 82 0 chr5 78096381 78096516 -121533634 - L3 LINE CR1 -2 1575 1430 2164 92 41 3 chr5 78096642 78096936 -121533214 - AluY SINE Alu -6 305 1 869 138 17 11 chr5 78096956 78097130 -121533020 + CT-rich Low_complexity Low_complexity 4 178 0 611 192 51 138 chr5 78097152 78097428 -121532722 - MLT1B LTR MaLR -49 341 90 2346 148 114 2 chr5 78097429 78097841 -121532309 + MLT2B2 LTR ERVL 1 458 -57 856 141 43 11 chr5 78097860 78098044 -121532106 - L1MA8 LINE L1 -7 6284 6095 1440 56 0 30 chr5 78098044 78098241 -121531909 + AluY SINE Alu 121 311 0 372 145 43 0 chr5 78098243 78098312 -121531838 - L1MA8 LINE L1 -181 6110 6039 1605 219 36 25 chr5 78098460 78098899 -121531251 + L1ME3A LINE L1 5720 6163 -7 222 222 19 0 chr5 78099558 78099612 -121530538 + L2 LINE L2 2994 3048 -224 371 254 107 8 chr5 78099943 78100065 -121530085 + L2 LINE L2 3180 3313 0 6579 78 6 9 chr5 78100448 78102074 -121528076 + L1PA10 LINE L1 4520 6147 -21 189 0 0 0 chr5 78102074 78102095 -121528055 + (TTAAA)n Simple_repeat Simple_repeat 3 23 0 6579 78 6 9 chr5 78102095 78102112 -121528038 + L1PA10 LINE L1 6147 6163 -5 267 330 93 21 chr5 78102485 78102582 -121527568 + MIR SINE MIR 8 111 -151 746 246 47 23 chr5 78102582 78102797 -121527353 - MLT1F LTR MaLR -322 220 1 446 265 72 94 chr5 78102797 78103155 -121526995 - MLT1G1 LTR MaLR -244 351 2 795 309 52 4 chr5 78103533 78103763 -121526387 - MIR SINE MIR -9 253 13 778 269 68 41 chr5 78104316 78104877 -121525273 + MER115 DNA AcHobo 55 675 -18 2335 121 0 0 chr5 78106206 78106519 -121523631 - AluSq SINE Alu 0 313 1 252 240 120 0 chr5 78106519 78106594 -121523556 + MIR3 SINE MIR 121 204 -4 400 266 91 100 chr5 78107394 78107635 -121522515 - MIR SINE MIR -11 251 13 39666 39 24 2 chr5 78107788 78113743 -121516407 + L1PA3 LINE L1 66 6155 0 692 102 0 0 chr5 78115202 78115300 -121514850 - AluSg/x SINE Alu -1 309 212 252 0 0 0 chr5 78115696 78115724 -121514426 + (A)n Simple_repeat Simple_repeat 1 28 0 310 261 101 25 chr5 78116459 78116578 -121513572 - MER5A DNA MER1_type -6 183 56 * 341 302 38 0 chr5 78116480 78116586 -121513564 + MER5A DNA MER1_type 43 152 -37 1386 189 33 3 chr5 78116587 78116893 -121513257 + L1MA8 LINE L1 5973 6287 -4 223 343 55 0 chr5 78116993 78117066 -121513084 - L2 LINE L2 -46 3226 3150 904 181 52 38 chr5 78117085 78117295 -121512855 + MER20 DNA MER1_type 7 219 0 2317 225 73 32 chr5 78117637 78118322 -121511828 + L1MC/D LINE L1 36 748 -5648 252 175 88 0 chr5 78118410 78118467 -121511683 + L1MC/D LINE L1 4747 4808 -1407 2427 99 0 0 chr5 78118622 78118924 -121511226 + AluSq SINE Alu 1 302 -11 381 22 0 0 chr5 78119742 78119788 -121510362 + (TG)n Simple_repeat Simple_repeat 2 47 0 220 318 58 91 chr5 78120941 78121073 -121509077 + MIR3 SINE MIR 3 131 -77 1223 214 8 0 chr5 78121073 78121307 -121508843 - MER8 DNA MER2_type 0 239 4 220 318 58 91 chr5 78121307 78121328 -121508822 + MIR3 SINE MIR 131 151 -57 327 294 102 48 chr5 78121457 78121936 -121508214 + L1MC/D LINE L1 5341 5845 -2032 971 179 61 38 chr5 78121944 78122156 -121507994 + MER20 DNA MER1_type 1 217 -2 307 207 0 0 chr5 78122277 78122335 -121507815 - L1MC4 LINE L1 -1337 6705 6648 217 296 0 37 chr5 78124414 78124495 -121505655 - L2 LINE L2 -16 3297 3220 675 308 97 24 chr5 78124968 78125338 -121504812 - MLT1J2 LTR MaLR -24 426 30 552 148 20 0 chr5 78126085 78126186 -121503964 - L1MD2 LINE L1 -13 6346 6244 252 0 0 0 chr5 78127113 78127141 -121503009 + (A)n Simple_repeat Simple_repeat 1 28 0 201 74 0 0 chr5 78127762 78127789 -121502361 + (GA)n Simple_repeat Simple_repeat 1 27 0 278 261 81 19 chr5 78129446 78129607 -121500543 - L1MC4 LINE L1 0 8042 7872 33 0 0 0 chr5 78129953 78129986 -121500164 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr5 78130941 78130969 -121499181 + AT_rich Low_complexity Low_complexity 1 28 0 275 339 39 8 chr5 78131844 78131974 -121498176 - L2 LINE L2 -18 3295 3162 267 300 170 19 chr5 78132075 78132345 -121497805 - L2 LINE L2 -751 2563 2253 197 311 74 33 chr5 78133289 78133411 -121496739 - L2 LINE L2 -1412 1902 1776 * 204 267 0 0 chr5 78133398 78133443 -121496707 - L2 LINE L2 -5 3308 3264 555 56 0 0 chr5 78133689 78133760 -121496390 + L1PA8 LINE L1 6088 6158 -14 579 243 98 31 chr5 78134013 78134256 -121495894 + MIR SINE MIR 1 261 -1 196 328 127 26 chr5 78134265 78134454 -121495696 - L2 LINE L2 -665 2649 2442 316 319 59 12 chr5 78135149 78135318 -121494832 - MIR3 SINE MIR -8 200 24 637 178 25 8 chr5 78135673 78135791 -121494359 + L2 LINE L2 3194 3313 0 2313 95 0 3 chr5 78135869 78136165 -121493985 + AluY SINE Alu 1 295 -16 919 20 0 0 chr5 78136888 78136990 -121493160 - AluYb8 SINE Alu -3 315 214 400 258 21 0 chr5 78137178 78137271 -121492879 - L2 LINE L2 -5 3308 3214 2419 97 0 0 chr5 78138576 78138885 -121491265 + AluSx SINE Alu 1 309 -3 27 0 0 0 chr5 78138885 78138912 -121491238 + AT_rich Low_complexity Low_complexity 1 27 0 2284 93 3 10 chr5 78139921 78140223 -121489927 - AluSc SINE Alu -9 300 1 285 317 90 0 chr5 78140439 78140563 -121489587 - MER20B DNA MER1_type -5 214 77 250 377 37 11 chr5 78140885 78141076 -121489074 - MIR3 SINE MIR -3 205 10 338 194 174 0 chr5 78141095 78141193 -121488957 + L1MB3 LINE L1 6069 6183 0 558 258 65 39 chr5 78141373 78141528 -121488622 + MER91A DNA MER1_type 3 161 -35 21 36 0 0 chr5 78142457 78142485 -121487665 + AT_rich Low_complexity Low_complexity 1 28 0 4073 70 24 0 chr5 78143228 78143769 -121486381 - MER41A LTR ERV1 0 554 1 219 88 0 0 chr5 78143828 78143862 -121486288 + (A)n Simple_repeat Simple_repeat 1 34 0 938 194 82 90 chr5 78143895 78144272 -121485878 + L1MB4 LINE L1 5807 6180 0 1687 200 3 13 chr5 78145486 78145791 -121484359 - AluJb SINE Alu -10 302 1 335 136 0 0 chr5 78146054 78146113 -121484037 + MER53 DNA DNA 111 169 -20 268 270 34 56 chr5 78146237 78146326 -121483824 + MER5A DNA MER1_type 81 167 -22 322 240 40 0 chr5 78146412 78146512 -121483638 - MER5A DNA MER1_type -77 112 9 2010 101 65 0 chr5 78147237 78147514 -121482636 - AluSc SINE Alu -14 295 1 1930 162 0 6 chr5 78147666 78147980 -121482170 - AluJo SINE Alu 0 312 1 273 312 7 43 chr5 78148145 78148286 -121481864 - L2 LINE L2 -219 3053 2918 234 247 161 32 chr5 78148780 78148873 -121481277 + L2 LINE L2 3158 3262 -10 266 364 121 15 chr5 78150512 78150644 -121479506 - L2 LINE L2 -2 3270 3125 268 175 175 68 chr5 78151669 78151772 -121478378 + L1MB8 LINE L1 6 119 -6740 1160 178 107 74 chr5 78151776 78152309 -121477841 - MER4C LTR ERV1 0 465 2 4828 257 55 36 chr5 78152318 78154449 -121475701 + L1MB8 LINE L1 128 2307 -4652 192 152 0 0 chr5 78154595 78154628 -121475522 + (CATATA)n Simple_repeat Simple_repeat 3 35 0 1928 232 35 47 chr5 78154707 78155757 -121474393 + L1MB8 LINE L1 2476 3471 -3486 5030 199 118 27 chr5 78155759 78156468 -121473682 + L1MB8 LINE L1 4376 5019 -1970 1934 191 66 9 chr5 78156468 78156907 -121473243 - MLT1C LTR MaLR -3 464 1 5030 199 118 27 chr5 78156907 78158461 -121471689 + L1MB8 LINE L1 5019 6849 -140 1004 193 0 17 chr5 78158496 78158672 -121471478 - AluJb SINE Alu -139 173 1 595 208 34 7 chr5 78158672 78158821 -121471329 + L1MB8 LINE L1 6831 6983 -6 192 361 14 0 chr5 78159553 78159625 -121470525 + MIR3 SINE MIR 129 201 -7 265 214 0 163 chr5 78160298 78160396 -121469754 + L2 LINE L2 3185 3266 -6 1424 292 41 25 chr5 78210481 78211256 -121418894 + L1 LINE L1 2555 3342 -2804 621 248 201 52 chr5 78212773 78213212 -121416938 - MLT1E2 LTR MaLR -8 618 115 268 219 31 0 chr5 78213271 78213335 -121416815 - MLT1E2 LTR MaLR -584 70 5 201 121 0 0 chr5 78217127 78217160 -121412990 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 359 192 115 33 chr5 78218491 78218647 -121411503 + AluS SINE Alu 4 95 -208 294 50 0 0 chr5 78218651 78218691 -121411459 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 7315 268 15 21 chr5 78220510 78223209 -121406941 - L1P4 LINE L1 -665 5501 2819 1092 118 41 0 chr5 78223497 78223666 -121406484 + AluSq SINE Alu 125 300 -13 588 180 127 116 chr5 78223669 78223909 -121406241 + LTR56 LTR ERV1 79 326 -119 2331 107 0 0 chr5 78223909 78224209 -121405941 + AluY SINE Alu 1 300 -11 588 180 127 116 chr5 78224209 78224330 -121405820 + LTR56 LTR ERV1 326 444 -1 4558 129 25 4 chr5 78224550 78225245 -121404905 + MER50 LTR ERV1 3 711 -23 2503 83 81 50 chr5 78225267 78225285 -121404865 - LTR23 LTR ERV1 -5 432 416 1685 139 48 74 chr5 78225285 78225594 -121404556 + AluJb SINE Alu 1 301 -11 2503 83 81 50 chr5 78225594 78225868 -121404282 - LTR23 LTR ERV1 -21 416 120 2258 95 0 0 chr5 78225868 78226173 -121403977 - AluSq SINE Alu 0 305 1 2503 83 81 50 chr5 78226173 78226297 -121403853 - LTR23 LTR ERV1 -317 120 1 191 318 112 37 chr5 78226347 78226454 -121403696 - L2 LINE L2 -640 2674 2560 763 159 15 8 chr5 78226920 78227052 -121403098 - FLAM_C SINE Alu 0 133 1 2119 135 0 10 chr5 78227887 78228191 -121401959 - AluSx SINE Alu -11 301 1 376 327 111 7 chr5 78228205 78228475 -121401675 - L1ME LINE L1 -377 5785 5494 278 177 10 52 chr5 78228621 78228717 -121401433 + (TGGG)n Simple_repeat Simple_repeat 2 93 0 429 207 50 8 chr5 78228749 78228870 -121401280 - HERVH LTR ERV1 -4427 3286 3161 21065 84 9 27 chr5 78228870 78231917 -121398233 - HERVH LTR ERV1 -4718 2995 1 3522 56 2 7 chr5 78231919 78232369 -121397781 - LTR7 LTR ERV1 -2 448 1 866 91 9 0 chr5 78232369 78232479 -121397671 - AluSg SINE Alu -199 111 1 613 187 52 15 chr5 78232513 78232647 -121397503 - MER21B LTR ERV1 -623 240 102 1320 114 0 0 chr5 78232723 78232898 -121397252 - AluSg/x SINE Alu -4 306 132 2207 104 0 3 chr5 78232899 78233196 -121396954 - AluSq SINE Alu -12 301 6 346 130 0 65 chr5 78233207 78233284 -121396866 - LTR56 LTR ERV1 -370 75 4 2303 101 0 3 chr5 78234614 78234911 -121395239 - AluSg SINE Alu -14 296 1 1912 133 29 16 chr5 78235216 78235524 -121394626 - AluSx SINE Alu 0 312 1 381 129 0 29 chr5 78235524 78235585 -121394565 - Alu SINE Alu -7 294 234 762 159 185 6 chr5 78235585 78235742 -121394408 - AluSx SINE Alu -126 186 2 291 208 156 0 chr5 78236281 78236358 -121393792 + L2 LINE L2 3225 3313 0 2276 122 0 0 chr5 78237243 78237546 -121392604 - AluSx SINE Alu -9 303 1 22 0 0 0 chr5 78238302 78238324 -121391826 + AT_rich Low_complexity Low_complexity 1 22 0 2313 101 0 7 chr5 78239046 78239354 -121390796 + AluSx SINE Alu 6 311 -1 348 309 150 17 chr5 78239472 78239600 -121390550 + Charlie8 DNA MER1_type 9 119 -222 216 0 0 0 chr5 78239600 78239624 -121390526 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 348 309 150 17 chr5 78239624 78239728 -121390422 + Charlie8 DNA MER1_type 119 272 -69 1823 144 34 24 chr5 78241089 78241387 -121388763 - AluJb SINE Alu -11 301 1 236 167 21 42 chr5 78241747 78241795 -121388355 + L2 LINE L2 3244 3290 -23 183 80 0 0 chr5 78241805 78241830 -121388320 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 360 276 103 17 chr5 78241973 78242152 -121387998 + MIR SINE MIR 43 239 -23 25 0 0 0 chr5 78242224 78242249 -121387901 + AT_rich Low_complexity Low_complexity 1 25 0 285 247 21 10 chr5 78242990 78243087 -121387063 + (TA)n Simple_repeat Simple_repeat 1 98 0 514 261 100 6 chr5 78243203 78243383 -121386767 + MIR SINE MIR 53 249 -13 1879 195 34 37 chr5 78243430 78243472 -121386678 - MLT2D LTR ERVL -5 409 368 252 86 0 0 chr5 78243472 78243507 -121386643 + (TG)n Simple_repeat Simple_repeat 2 36 0 195 42 0 0 chr5 78243512 78243536 -121386614 + (GA)n Simple_repeat Simple_repeat 1 24 0 1879 195 34 37 chr5 78243536 78243897 -121386253 - MLT2D LTR ERVL -50 364 1 290 281 104 0 chr5 78243906 78244002 -121386148 - MIR SINE MIR -112 150 45 2183 131 0 10 chr5 78244068 78244382 -121385768 - AluSx SINE Alu 0 312 2 23 0 0 0 chr5 78244456 78244479 -121385671 + AT_rich Low_complexity Low_complexity 1 23 0 1913 118 11 4 chr5 78244893 78245165 -121384985 + AluSx SINE Alu 1 274 -38 2272 112 0 3 chr5 78245688 78245993 -121384157 - AluSq SINE Alu -7 306 3 232 316 143 8 chr5 78247360 78247493 -121382657 - MIR SINE MIR -51 211 61 180 0 0 0 chr5 78247618 78247638 -121382512 + (TTG)n Simple_repeat Simple_repeat 2 21 0 369 277 95 0 chr5 78247885 78248022 -121382128 - MIR SINE MIR 0 262 113 2197 89 41 0 chr5 78248331 78248624 -121381526 - AluSg SINE Alu -5 305 1 207 298 152 32 chr5 78248808 78249217 -121380933 + L2 LINE L2 2403 2860 -454 261 0 0 0 chr5 78249365 78249394 -121380756 + (TA)n Simple_repeat Simple_repeat 2 30 0 2657 49 0 3 chr5 78249394 78249702 -121380448 - AluY SINE Alu -4 307 1 221 319 44 44 chr5 78250772 78250885 -121379265 + L2 LINE L2 3160 3272 0 454 279 108 0 chr5 78251050 78251208 -121378942 - MIR SINE MIR -32 230 56 315 273 189 8 chr5 78251437 78251569 -121378581 - MIR3 SINE MIR -9 199 44 1937 150 3 3 chr5 78251681 78251981 -121378169 + AluJo SINE Alu 5 304 -8 400 138 15 0 chr5 78252327 78252392 -121377758 - FRAM/FAM SINE Alu -81 85 20 262 266 0 43 chr5 78252393 78252487 -121377663 - L2 LINE L2 -189 3083 2994 481 44 0 0 chr5 78252504 78252572 -121377578 - AluJb SINE Alu -4 308 241 999 212 11 0 chr5 78252573 78252762 -121377388 - AluJb SINE Alu -113 199 9 349 234 284 0 chr5 78252848 78252989 -121377161 + MER5A DNA MER1_type 1 181 -8 1919 135 39 14 chr5 78252999 78253281 -121376869 + AluJo SINE Alu 6 294 -18 2288 125 3 0 chr5 78253799 78254110 -121376040 - AluSx SINE Alu 0 312 1 265 307 132 0 chr5 78254137 78254251 -121375899 + L2 LINE L2 3144 3272 0 28 0 0 0 chr5 78255420 78255448 -121374702 + AT_rich Low_complexity Low_complexity 1 28 0 1729 177 0 31 chr5 78255454 78255776 -121374374 - AluJb SINE Alu 0 312 1 3461 146 70 154 chr5 78255776 78256034 -121374116 + MER21A LTR ERV1 15 293 -638 2367 92 3 0 chr5 78256034 78256327 -121373823 - AluSc SINE Alu -15 294 1 3461 146 70 154 chr5 78256327 78256472 -121373678 + MER21A LTR ERV1 293 449 -482 2224 121 7 0 chr5 78256472 78256777 -121373373 + AluSx SINE Alu 1 307 -5 2086 117 3 3 chr5 78256777 78257104 -121373046 + AluSp SINE Alu 1 327 0 3461 146 70 154 chr5 78257104 78257598 -121372552 + MER21A LTR ERV1 448 831 -100 2467 81 10 3 chr5 78257598 78257907 -121372243 - AluSq SINE Alu -2 311 1 3461 146 70 154 chr5 78257907 78257974 -121372176 + MER21A LTR ERV1 831 902 -29 439 317 36 78 chr5 78258107 78258388 -121371762 - L2 LINE L2 -2 3270 3002 2411 100 3 0 chr5 78258490 78258799 -121371351 + AluSg SINE Alu 1 310 0 835 141 25 0 chr5 78259852 78259973 -121370177 + FLAM_C SINE Alu 1 124 -19 303 28 0 0 chr5 78259974 78260010 -121370140 + (CA)n Simple_repeat Simple_repeat 2 37 0 1201 159 0 0 chr5 78260836 78261012 -121369138 + FRAM SINE Alu 1 174 -2 344 167 14 0 chr5 78261020 78261092 -121369058 + GA-rich Low_complexity Low_complexity 4 76 0 489 219 204 10 chr5 78261467 78261688 -121368462 - MLT1J LTR MaLR -192 319 11 2315 98 0 0 chr5 78262412 78262707 -121367443 + AluSx SINE Alu 1 295 -17 750 139 0 17 chr5 78262740 78262855 -121367295 - FLAM_C SINE Alu -10 133 21 885 196 79 117 chr5 78262996 78263081 -121367069 - MER21B LTR ERV1 -81 782 695 3720 154 111 0 chr5 78263081 78263729 -121366421 - MER72 LTR ERV1 0 722 3 885 196 79 117 chr5 78263729 78264112 -121366038 - MER21B LTR ERV1 -168 695 332 1460 92 5 5 chr5 78264140 78264335 -121365815 - AluSg/x SINE Alu -15 297 103 3380 61 11 7 chr5 78264335 78264778 -121365372 - LTR7 LTR ERV1 -5 445 1 2503 87 45 16 chr5 78264778 78265159 -121364991 - HERVH LTR ERV1 0 7713 7322 1426 130 19 0 chr5 78265157 78265373 -121364777 - HERVH LTR ERV1 -1894 5819 5600 * 4297 148 9 1 chr5 78265374 78266031 -121364119 - HERVH LTR ERV1 -2564 5149 4488 2854 97 53 27 chr5 78266033 78266508 -121363642 - HERVH LTR ERV1 -3720 3993 3507 483 197 80 107 chr5 78266825 78267124 -121363026 - L1ME4a LINE L1 -74 6047 5757 231 167 0 0 chr5 78267155 78267197 -121362953 + T-rich Low_complexity Low_complexity 1 42 0 2512 77 0 0 chr5 78267698 78268009 -121362141 + AluY SINE Alu 1 311 0 497 152 67 38 chr5 78268929 78269034 -121361116 - AluJb SINE Alu -105 207 100 1145 253 116 7 chr5 78270857 78271150 -121359000 + MLT1G LTR MaLR 3 327 -263 475 200 213 19 chr5 78271328 78271483 -121358667 + MLT1G LTR MaLR 304 488 -67 329 152 57 95 chr5 78271603 78271708 -121358442 - L1MEd LINE L1 -5986 133 33 230 280 143 23 chr5 78271856 78272031 -121358119 + L2 LINE L2 3108 3303 -10 189 0 0 0 chr5 78272031 78272052 -121358098 + (CA)n Simple_repeat Simple_repeat 2 22 0 3118 221 34 28 chr5 78272167 78272453 -121357697 - L1ME1 LINE L1 -3 6163 5880 1803 136 64 0 chr5 78272453 78272733 -121357417 - AluJb SINE Alu -14 298 1 3118 221 34 28 chr5 78272733 78273259 -121356891 - L1ME1 LINE L1 -286 5880 5346 214 354 0 0 chr5 78273292 78273357 -121356793 - L2 LINE L2 -86 3186 3122 795 188 0 0 chr5 78273357 78273490 -121356660 + FLAM_C SINE Alu 1 133 0 240 191 0 0 chr5 78273546 78273593 -121356557 + Alu SINE Alu 256 302 0 2474 70 3 0 chr5 78275039 78275340 -121354810 + AluY SINE Alu 1 302 -9 49 52 0 0 chr5 78275357 78275434 -121354716 + AT_rich Low_complexity Low_complexity 1 77 0 1517 161 62 36 chr5 78275524 78275829 -121354321 - MER44D DNA MER2_type -26 583 1 244 254 0 0 chr5 78275834 78275893 -121354257 - MLT1G1 LTR MaLR 0 595 537 241 333 0 13 chr5 78276216 78276294 -121353856 - MER5B DNA MER1_type -4 174 98 346 172 35 81 chr5 78276354 78276441 -121353709 + MER5B DNA MER1_type 92 174 -4 231 285 7 109 chr5 78276447 78276584 -121353566 + L2 LINE L2 3148 3270 -2 2098 126 67 14 chr5 78276650 78277006 -121353144 - THE1C LTR MaLR 0 375 1 10062 114 50 18 chr5 78277006 78278537 -121351613 - THE1C-int LTR MaLR 0 1580 2 1375 131 81 60 chr5 78278538 78278608 -121351542 - THE1C LTR MaLR 0 375 308 1750 144 19 0 chr5 78278608 78278878 -121351272 + AluSx SINE Alu 1 275 -37 216 0 0 0 chr5 78278884 78278908 -121351242 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1375 131 81 60 chr5 78278908 78279113 -121351037 - THE1C LTR MaLR -71 304 87 195 250 211 0 chr5 78280211 78280339 -121349811 + L3b LINE CR1 1249 1403 -180 22 0 0 0 chr5 78280385 78280407 -121349743 + AT_rich Low_complexity Low_complexity 1 22 0 319 224 147 9 chr5 78280513 78280629 -121349521 - L1ME4a LINE L1 -1 6120 5989 23 0 0 0 chr5 78281173 78281196 -121348954 + AT_rich Low_complexity Low_complexity 1 23 0 564 193 0 0 chr5 78281211 78281325 -121348825 + (TA)n Simple_repeat Simple_repeat 1 114 0 692 137 0 65 chr5 78281346 78281470 -121348680 - FLAM_C SINE Alu -25 118 3 540 252 0 0 chr5 78281909 78282040 -121348110 - Charlie2 DNA MER1_type -120 2742 2612 754 126 0 17 chr5 78282073 78282192 -121347958 + AluSg/x SINE Alu 193 309 0 1592 182 88 37 chr5 78282212 78282859 -121347291 - Charlie2 DNA MER1_type -281 2581 1857 459 194 115 65 chr5 78282967 78283049 -121347101 - Charlie2 DNA MER1_type -2713 149 56 2173 115 0 10 chr5 78283049 78283353 -121346797 + AluSx SINE Alu 1 301 -11 459 194 115 65 chr5 78283353 78283409 -121346741 - Charlie2 DNA MER1_type -2806 56 4 236 240 73 21 chr5 78283445 78283541 -121346609 + MIR SINE MIR 112 212 -50 621 148 70 17 chr5 78283739 78283854 -121346296 - THE1C LTR MaLR -254 121 1 1878 163 0 7 chr5 78284835 78285124 -121345026 + AluJb SINE Alu 1 287 -25 821 246 79 12 chr5 78285128 78285368 -121344782 - MIR SINE MIR 0 262 7 1298 173 95 153 chr5 78287025 78287540 -121342610 - MER31A LTR ERV1 0 485 1 1709 165 202 8 chr5 78287838 78288195 -121341955 - MSTB LTR MaLR 0 426 1 343 245 14 129 chr5 78289054 78289201 -121340949 - MER5A DNA MER1_type -53 136 7 183 339 93 17 chr5 78290854 78290972 -121339178 + MIR3 SINE MIR 30 156 -52 3254 172 9 14 chr5 78291463 78291508 -121338642 - MLT2B3 LTR ERVL 0 554 510 587 50 0 12 chr5 78291508 78291588 -121338562 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 3254 172 9 14 chr5 78291588 78292040 -121338110 - MLT2B3 LTR ERVL -44 510 58 2309 133 93 5 chr5 78292040 78292437 -121337713 + MSTB1 LTR MaLR 1 432 0 3254 172 9 14 chr5 78292437 78292495 -121337655 - MLT2B3 LTR ERVL -496 58 1 248 264 83 8 chr5 78293345 78293466 -121336684 + L2 LINE L2 3108 3237 -76 3525 183 49 9 chr5 78293472 78294124 -121336026 + ERVL LTR ERVL 1539 2216 -3548 334 132 0 0 chr5 78294489 78294542 -121335608 - Alu SINE Alu 0 302 250 189 202 37 128 chr5 78294737 78294925 -121335225 + MIR SINE MIR 60 230 -32 23 24 0 24 chr5 78296781 78296799 -121333351 + AT_rich Low_complexity Low_complexity 1 18 -22 924 74 41 0 chr5 78296799 78296920 -121333230 + L1PA13 LINE L1 6030 6155 -8 23 24 0 24 chr5 78296920 78296942 -121333208 + AT_rich Low_complexity Low_complexity 18 40 0 183 42 0 0 chr5 78297533 78297557 -121332593 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 228 67 0 0 chr5 78299195 78299225 -121330925 + (TA)n Simple_repeat Simple_repeat 2 31 0 249 293 13 27 chr5 78299588 78299663 -121330487 + L3 LINE CR1 1502 1575 -2 191 0 103 0 chr5 78299741 78299770 -121330380 + A-rich Low_complexity Low_complexity 1 32 0 181 224 61 20 chr5 78300465 78300514 -121329636 - L2 LINE L2 -2838 476 426 1067 77 0 0 chr5 78300606 78300736 -121329414 + AluSg SINE Alu 2 131 -179 610 265 39 15 chr5 78300753 78300957 -121329193 - L1M4 LINE L1 -3353 2793 2585 1908 149 0 0 chr5 78301305 78301624 -121328526 + AluSx SINE Alu 1 319 0 190 333 105 0 chr5 78302678 78302735 -121327415 - L3 LINE CR1 -1507 70 8 195 176 0 0 chr5 78302845 78302879 -121327271 - L2 LINE L2 -16 3297 3264 666 172 117 12 chr5 78302937 78303100 -121327050 - MER53 DNA DNA -7 182 3 1043 174 5 41 chr5 78303104 78303300 -121326850 + MER20 DNA MER1_type 31 219 0 261 295 69 64 chr5 78304311 78304484 -121325666 - MER5A DNA MER1_type -13 176 3 248 295 62 39 chr5 78304540 78304669 -121325481 + L2 LINE L2 2925 3056 -216 22 0 0 0 chr5 78304977 78304999 -121325151 + AT_rich Low_complexity Low_complexity 1 22 0 269 103 51 0 chr5 78305008 78305047 -121325103 - MER57A LTR ERV1 -68 335 295 323 305 21 0 chr5 78305422 78305517 -121324633 + MIR SINE MIR 16 112 -150 2013 147 6 20 chr5 78305521 78305867 -121324283 - L1MB3 LINE L1 0 6183 5843 2196 104 0 0 chr5 78305868 78306179 -121323971 + AluSx SINE Alu 3 313 0 21622 154 22 76 chr5 78306445 78310821 -121319329 + L1P LINE L1 12 4151 -1995 1014 200 0 16 chr5 78310921 78311106 -121319044 - AluJo SINE Alu -130 182 1 2644 48 7 0 chr5 78311900 78312209 -121317941 + AluY SINE Alu 1 311 0 782 254 36 65 chr5 78312405 78312653 -121317497 - MIR SINE MIR -21 241 1 1615 152 58 13 chr5 78312880 78313190 -121316960 + MER33 DNA MER1_type 1 324 0 247 277 36 0 chr5 78313454 78313537 -121316613 + (TGGA)n Simple_repeat Simple_repeat 1 86 0 348 64 0 0 chr5 78315307 78315354 -121314796 + (TG)n Simple_repeat Simple_repeat 2 48 0 1044 203 28 42 chr5 78315937 78316154 -121313996 - MER20 DNA MER1_type -5 214 1 231 349 84 0 chr5 78316825 78316908 -121313242 - L2 LINE L2 -25 3288 3199 583 157 88 0 chr5 78317822 78317924 -121312226 - FRAM SINE Alu -32 144 34 185 0 0 39 chr5 78318009 78318035 -121312115 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 21 36 0 0 chr5 78318359 78318387 -121311763 + AT_rich Low_complexity Low_complexity 1 28 0 3154 202 82 14 chr5 78320297 78320996 -121309154 - MER21B LTR ERV1 -54 809 64 312 27 0 0 chr5 78321626 78321663 -121308487 + (TG)n Simple_repeat Simple_repeat 2 38 0 200 247 96 55 chr5 78322452 78322525 -121307625 - MER91A DNA MER1_type 0 196 121 192 200 0 0 chr5 78322606 78322646 -121307504 + T-rich Low_complexity Low_complexity 1 40 0 21 57 0 0 chr5 78323450 78323485 -121306665 + AT_rich Low_complexity Low_complexity 1 35 0 329 280 45 15 chr5 78323492 78323624 -121306526 + L1ME3 LINE L1 6016 6151 -11 242 321 25 0 chr5 78323668 78323749 -121306401 + MER5B DNA MER1_type 49 131 -47 2863 141 85 14 chr5 78323756 78324252 -121305898 - L1MA9 LINE L1 0 6312 5782 5339 173 44 3 chr5 78324305 78325329 -121304821 - L1MA9 LINE L1 -1096 5050 3985 306 167 19 0 chr5 78325329 78325383 -121304767 + MER5B DNA MER1_type 117 171 -7 536 181 0 0 chr5 78326680 78326763 -121303387 + AluJ/FLAM SINE Alu 2 84 -228 332 263 53 15 chr5 78328232 78328365 -121301785 + MIR SINE MIR 2 139 -123 575 262 22 41 chr5 78328365 78328636 -121301514 + L1MC3 LINE L1 5593 5858 -1927 * 2849 60 0 0 chr5 78328404 78328756 -121301394 + L1PA8 LINE L1 5627 5978 -194 1138 202 38 5 chr5 78329058 78329271 -121300879 - MER58A DNA MER1_type 0 224 5 3036 84 0 11 chr5 78329781 78330160 -121299990 - THE1C LTR MaLR 0 375 1 188 133 0 0 chr5 78330797 78330827 -121299323 + L2 LINE L2 2944 2973 -340 2191 121 0 0 chr5 78330962 78331259 -121298891 + AluSc SINE Alu 1 297 -12 1913 164 0 22 chr5 78332026 78332343 -121297807 - AluJb SINE Alu -2 310 1 830 281 92 65 chr5 78335252 78335653 -121294497 + L2 LINE L2 2808 3226 -87 898 226 6 0 chr5 78335653 78335817 -121294333 + FAM SINE Alu 1 165 -10 830 281 92 65 chr5 78335817 78335907 -121294243 + L2 LINE L2 3226 3312 -1 339 195 155 75 chr5 78336201 78336375 -121293775 + MIR3 SINE MIR 18 205 -3 318 312 13 0 chr5 78336569 78336646 -121293504 + L2 LINE L2 3193 3270 -2 567 281 148 0 chr5 78336918 78337114 -121293036 - MIR SINE MIR -19 243 19 387 171 349 23 chr5 78337163 78337292 -121292858 - MER5A DNA MER1_type 0 189 19 1353 222 31 19 chr5 78337323 78337463 -121292687 - MER33 DNA MER1_type -2261 324 187 2168 98 7 0 chr5 78337463 78337750 -121292400 - AluSc SINE Alu -11 298 10 1353 222 31 19 chr5 78337750 78337929 -121292221 - MER33 DNA MER1_type -2398 187 1 1485 174 23 114 chr5 78338243 78338639 -121291511 - MLT1A1 LTR MaLR 0 365 6 269 329 108 28 chr5 78339360 78339646 -121290504 + L3b LINE CR1 1112 1420 -163 349 286 86 9 chr5 78342618 78342723 -121287427 - MIR SINE MIR -137 125 13 622 133 0 0 chr5 78343227 78343310 -121286840 - FRAM SINE Alu -17 159 77 351 0 0 0 chr5 78343316 78343355 -121286795 + (TTA)n Simple_repeat Simple_repeat 2 40 0 817 149 8 0 chr5 78343355 78343476 -121286674 - FLAM_C SINE Alu -21 122 1 2392 105 0 0 chr5 78344789 78345093 -121285057 + AluSx SINE Alu 1 304 -8 2336 93 0 16 chr5 78345506 78345816 -121284334 + AluSq SINE Alu 2 306 -7 380 141 56 0 chr5 78346570 78346641 -121283509 + AluJ/FRAM SINE Alu 226 300 -2 734 276 78 30 chr5 78346926 78347259 -121282891 - LTR16B LTR ERVL 0 464 116 1168 158 70 84 chr5 78347679 78348012 -121282138 - MLT1A1 LTR MaLR -4 424 49 2835 118 21 14 chr5 78348012 78348437 -121281713 - MSTA LTR MaLR 0 428 1 1168 158 70 84 chr5 78348437 78348470 -121281680 - MLT1A1 LTR MaLR -379 49 17 556 212 30 23 chr5 78349058 78349190 -121280960 - MER21B LTR ERV1 -646 217 85 1253 183 56 74 chr5 78349209 78349376 -121280774 - AluJo SINE Alu -32 280 119 183 42 0 0 chr5 78349376 78349400 -121280750 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1253 183 56 74 chr5 78349400 78349517 -121280633 - AluJo SINE Alu -193 119 1 367 171 186 0 chr5 78349520 78349590 -121280560 - MER21B LTR ERV1 -767 96 14 248 265 20 61 chr5 78349925 78350072 -121280078 + L1ME LINE L1 5357 5497 -624 3675 202 71 24 chr5 78350235 78350338 -121279812 - L1MDa LINE L1 -4865 1675 1578 1612 171 241 12 chr5 78350338 78350752 -121279398 - LTR54 LTR ERV1 0 510 2 3675 202 71 24 chr5 78350752 78352007 -121278143 - L1MDa LINE L1 -4962 1578 35 208 365 103 0 chr5 78352180 78352306 -121277844 - L2 LINE L2 -219 3053 2915 2656 52 0 0 chr5 78352482 78352789 -121277361 + AluY SINE Alu 1 307 -4 188 305 51 42 chr5 78352856 78352974 -121277176 - L2 LINE L2 -782 2532 2414 255 289 114 0 chr5 78353074 78353188 -121276962 - L2 LINE L2 -945 2369 2243 955 265 104 47 chr5 78353262 78353816 -121276334 - L2 LINE L2 -26 3287 2706 238 186 0 17 chr5 78353848 78353907 -121276243 - L2 LINE L2 -737 2577 2520 2096 124 0 20 chr5 78355464 78355763 -121274387 - AluSx SINE Alu -19 293 1 313 368 8 0 chr5 78356219 78356352 -121273798 + MIR3 SINE MIR 60 193 -15 281 259 12 12 chr5 78357281 78357366 -121272784 + L2 LINE L2 3168 3252 -61 216 0 0 0 chr5 78357367 78357391 -121272759 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 287 270 71 24 chr5 78357665 78357791 -121272359 + MIR SINE MIR 22 153 -55 * 499 257 34 14 chr5 78357787 78357935 -121272215 - MIR SINE MIR -32 230 80 288 0 0 0 chr5 78358399 78358431 -121271719 + (CA)n Simple_repeat Simple_repeat 1 32 0 509 204 32 102 chr5 78359529 78359715 -121270435 + MER5B DNA MER1_type 5 177 -1 208 303 30 15 chr5 78360186 78360252 -121269898 + L2 LINE L2 3205 3271 -1 213 39 0 0 chr5 78360650 78360676 -121269474 + (CA)n Simple_repeat Simple_repeat 2 27 0 1891 150 7 3 chr5 78360755 78361041 -121269109 + AluJb SINE Alu 1 287 -25 183 339 0 0 chr5 78361109 78361165 -121268985 - MIR SINE MIR 0 262 207 2461 95 0 0 chr5 78361345 78361649 -121268501 + AluSg SINE Alu 1 304 -6 23 33 0 0 chr5 78361888 78361918 -121268232 + AT_rich Low_complexity Low_complexity 1 30 0 1844 155 3 25 chr5 78362336 78362653 -121267497 + AluJb SINE Alu 1 310 -2 869 111 0 8 chr5 78363237 78363354 -121266796 + FLAM_C SINE Alu 1 116 -27 2245 130 114 16 chr5 78363378 78363808 -121266342 + L1MC2 LINE L1 5873 6344 0 2133 121 0 16 chr5 78364665 78364971 -121265179 + AluJb SINE Alu 1 301 -11 21 36 0 0 chr5 78365015 78365043 -121265107 + AT_rich Low_complexity Low_complexity 1 28 0 6053 112 2 0 chr5 78365371 78366262 -121263888 + L1P LINE L1 4267 5159 -987 633 164 144 7 chr5 78366370 78366516 -121263634 - MLT1D LTR MaLR -317 188 23 4286 61 54 57 chr5 78366632 78367243 -121262907 - LTR66 LTR ERVL -1 609 1 2113 133 0 7 chr5 78367268 78367570 -121262580 + AluSx SINE Alu 1 300 -12 2346 100 0 13 chr5 78367575 78367886 -121262264 + AluSc SINE Alu 3 309 0 187 243 14 54 chr5 78368412 78368486 -121261664 + MIR SINE MIR 75 145 -63 36 23 0 0 chr5 78368799 78368842 -121261308 + AT_rich Low_complexity Low_complexity 1 43 0 1267 249 139 28 chr5 78368937 78369406 -121260744 - LTR33 LTR ERVL 0 521 1 6745 68 1 11 chr5 78370273 78371538 -121258612 + L1PA8A LINE L1 4873 6129 -2 870 176 0 0 chr5 78371622 78371764 -121258386 - FLAM_C SINE Alu -1 142 1 1503 193 6 39 chr5 78372067 78372378 -121257772 + AluJo SINE Alu 2 302 -10 1034 183 0 0 chr5 78372378 78372542 -121257608 + AluJo/FRAM SINE Alu 134 297 -15 227 278 46 121 chr5 78376042 78376215 -121253935 + MIR3 SINE MIR 23 182 -26 2162 108 0 3 chr5 78376274 78376561 -121253589 - AluSx SINE Alu -17 295 10 203 278 74 0 chr5 78377903 78377957 -121252193 - L2 LINE L2 -6 3307 3250 2146 113 0 48 chr5 78378349 78378660 -121251490 - AluSx SINE Alu -16 296 1 1505 218 63 47 chr5 78379869 78380295 -121249855 - MER63B DNA MER1_type -1 435 3 237 329 0 13 chr5 78381723 78381802 -121248348 + MER117 DNA MER1_type 2 79 -118 1796 221 87 32 chr5 78381972 78382464 -121247686 - MLT1L LTR MaLR -87 528 10 849 207 90 5 chr5 78382489 78382677 -121247473 - MER3 DNA MER1_type -4 205 2 7420 68 9 11 chr5 78382926 78384214 -121245936 - SVA Other Other -875 1386 181 2254 137 5 61 chr5 78384536 78384944 -121245206 - MLT1B LTR MaLR 0 390 6 2267 113 7 0 chr5 78386101 78386411 -121243739 - AluSx SINE Alu 0 312 1 1270 148 57 47 chr5 78386538 78386835 -121243315 - MER69 DNA AcHobo -42 2484 2185 2560 70 0 0 chr5 78386892 78387193 -121242957 + AluY SINE Alu 5 305 -6 1254 230 68 35 chr5 78387193 78387279 -121242871 - MER69 DNA AcHobo -2003 523 441 4214 128 9 3 chr5 78387279 78387910 -121242240 + MER41B LTR ERV1 1 635 0 1254 230 68 35 chr5 78387910 78388208 -121241942 - MER69 DNA AcHobo -2085 441 123 834 151 0 29 chr5 78388228 78388367 -121241783 - AluJo SINE Alu -177 135 1 2353 108 0 0 chr5 78388380 78388687 -121241463 - AluSq SINE Alu -6 307 1 661 195 73 0 chr5 78388712 78388835 -121241315 + FLAM_C SINE Alu 1 132 -11 565 205 25 25 chr5 78388848 78388970 -121241180 - MER69 DNA AcHobo -2404 122 1 429 335 42 23 chr5 78388972 78389187 -121240963 + MIR SINE MIR 31 249 -13 545 258 82 21 chr5 78390065 78390259 -121239891 + MIR SINE MIR 13 218 -44 256 179 0 54 chr5 78390274 78390330 -121239820 - L1MA9 LINE L1 -38 6274 6222 902 118 0 22 chr5 78390344 78390480 -121239670 - FLAM_C SINE Alu 0 133 1 509 274 132 0 chr5 78390482 78390679 -121239471 - L1M4 LINE L1 -950 5196 4974 1310 229 82 28 chr5 78390699 78391207 -121238943 + L1ME LINE L1 5173 5708 -462 1519 159 9 0 chr5 78391252 78391478 -121238672 + AluJb SINE Alu 58 285 -27 47 47 0 12 chr5 78391855 78391881 -121238269 + AT_rich Low_complexity Low_complexity 1 26 -59 2368 94 0 0 chr5 78391881 78392180 -121237970 + AluSp SINE Alu 1 299 -14 47 47 0 12 chr5 78392180 78392239 -121237911 + AT_rich Low_complexity Low_complexity 26 85 0 526 253 25 38 chr5 78392308 78392466 -121237684 - MIR SINE MIR -100 162 7 216 337 23 12 chr5 78392623 78392709 -121237441 - L2 LINE L2 -30 3242 3156 521 285 41 65 chr5 78392751 78392997 -121237153 - L2 LINE L2 -3 3269 3030 616 260 84 13 chr5 78393118 78393345 -121236805 - MIR SINE MIR 0 262 20 2029 178 69 5 chr5 78393472 78393876 -121236274 + MER63B DNA MER1_type 7 436 0 357 260 0 10 chr5 78394104 78394200 -121235950 + L2 LINE L2 3178 3272 0 848 272 33 82 chr5 78394416 78394868 -121235282 - LTR16A LTR ERVL -12 438 9 2104 127 10 3 chr5 78394900 78395208 -121234942 - AluSx SINE Alu -2 310 1 3801 111 15 34 chr5 78395217 78395832 -121234318 - L1MC1 LINE L1 0 6333 5731 5596 111 23 25 chr5 78395223 78396062 -121234088 - L1MC1 LINE L1 -6 6327 5491 950 220 91 25 chr5 78396158 78396184 -121233966 + MIR SINE MIR 4 27 -235 2176 118 0 3 chr5 78396184 78396481 -121233669 + AluSg1 SINE Alu 1 296 -13 950 220 91 25 chr5 78396481 78396695 -121233455 + MIR SINE MIR 27 260 -2 2124 97 3 23 chr5 78396695 78396994 -121233156 + AluSx SINE Alu 1 293 -19 963 188 0 6 chr5 78397135 78397300 -121232850 - FRAM SINE Alu -12 164 1 436 300 88 35 chr5 78398035 78398199 -121231951 - L2 LINE L2 0 3313 3126 2247 112 0 0 chr5 78398199 78398494 -121231656 + AluSc SINE Alu 1 295 -14 436 300 88 35 chr5 78398494 78398612 -121231538 - L2 LINE L2 -187 3126 3016 1786 176 3 7 chr5 78398631 78398926 -121231224 + AluJb SINE Alu 1 294 -18 2206 104 0 0 chr5 78399398 78399703 -121230447 + AluSx SINE Alu 2 306 0 2308 157 45 8 chr5 78399784 78400166 -121229984 + MSTD LTR MaLR 1 396 0 1732 157 16 38 chr5 78400391 78400710 -121229440 - AluJo SINE Alu 0 312 1 873 303 114 16 chr5 78401099 78401485 -121228665 + L2 LINE L2 2890 3313 0 1117 86 7 0 chr5 78401592 78401731 -121228419 + AluSg SINE Alu 1 140 -170 2191 119 0 0 chr5 78401770 78402080 -121228070 - AluSg SINE Alu 0 310 1 2137 133 13 0 chr5 78402106 78402458 -121227692 + AluSx SINE Alu 1 356 0 590 227 68 136 chr5 78402608 78402947 -121227203 + Charlie8 DNA MER1_type 2 317 -2100 828 153 18 43 chr5 78402947 78403110 -121227040 - AluSg/x SINE Alu -1 308 150 204 219 122 0 chr5 78403310 78403351 -121226799 + L2 LINE L2 3210 3255 -17 237 222 0 0 chr5 78404435 78404480 -121225670 - L2 LINE L2 -14 3258 3214 650 226 0 7 chr5 78404615 78404752 -121225398 - Charlie4 DNA MER1_type -18 1943 1808 1496 130 0 14 chr5 78404931 78405147 -121225003 + AluSq SINE Alu 1 213 -100 21 0 0 0 chr5 78405157 78405178 -121224972 + AT_rich Low_complexity Low_complexity 1 21 0 566 274 73 42 chr5 78405197 78405538 -121224612 - MLT1J LTR MaLR -36 475 88 497 198 54 9 chr5 78405681 78405792 -121224358 - LTR67 LTR ERVL -14 543 428 1777 192 166 19 chr5 78406545 78407008 -121223142 + L1MD1 LINE L1 5473 6003 -239 249 179 48 24 chr5 78407114 78407198 -121222952 + (CATATA)n Simple_repeat Simple_repeat 5 90 0 22 56 0 0 chr5 78407230 78407266 -121222884 + AT_rich Low_complexity Low_complexity 1 36 0 35 0 0 0 chr5 78407333 78407368 -121222782 + AT_rich Low_complexity Low_complexity 1 35 0 272 250 10 31 chr5 78407432 78407528 -121222622 + FRAM SINE Alu 53 146 -20 634 23 0 23 chr5 78407530 78407616 -121222534 + (TA)n Simple_repeat Simple_repeat 1 84 0 1340 195 115 49 chr5 78407861 78408209 -121221941 - MLT1A2 LTR MaLR 0 374 4 638 193 14 146 chr5 78410461 78410611 -121219539 + MER5A DNA MER1_type 1 117 -72 1788 165 3 30 chr5 78410611 78410914 -121219236 - AluJo SINE Alu -15 297 3 638 193 14 146 chr5 78410914 78410975 -121219175 + MER5A DNA MER1_type 117 184 -5 21 36 0 0 chr5 78412538 78412566 -121217584 + AT_rich Low_complexity Low_complexity 1 28 0 257 167 0 121 chr5 78413230 78413258 -121216892 - L2 LINE L2 0 3272 3255 2204 119 7 0 chr5 78413258 78413553 -121216597 + AluSx SINE Alu 1 297 -15 257 167 0 121 chr5 78413553 78413590 -121216560 - L2 LINE L2 -17 3255 3215 2536 142 24 0 chr5 78413602 78413983 -121216167 + MLT1B LTR MaLR 1 390 0 240 111 0 0 chr5 78415519 78415564 -121214586 + (TG)n Simple_repeat Simple_repeat 2 46 0 624 27 0 0 chr5 78416219 78416293 -121213857 + (CA)n Simple_repeat Simple_repeat 2 75 0 207 0 0 0 chr5 78416932 78416955 -121213195 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 283 336 7 115 chr5 78416968 78417254 -121212896 - L2 LINE L2 -62 3210 2956 558 170 45 0 chr5 78417339 78417451 -121212699 + MER3 DNA MER1_type 48 164 -45 * 1697 169 66 8 chr5 78417447 78417813 -121212337 + MER3 DNA MER1_type 2238 2624 0 208 315 146 11 chr5 78417823 78417912 -121212238 + L2 LINE L2 3200 3300 -13 738 274 167 25 chr5 78417987 78418590 -121211560 - L2 LINE L2 -21 3292 2610 203 118 0 29 chr5 78419024 78419058 -121211092 - L2 LINE L2 -11 3261 3229 * 263 297 36 9 chr5 78419031 78419142 -121211008 - MIR SINE MIR -12 250 137 1780 146 70 3 chr5 78419164 78419451 -121210699 - AluJo SINE Alu -5 307 2 229 256 81 23 chr5 78419497 78419583 -121210567 + MIR3 SINE MIR 4 94 -114 283 284 0 14 chr5 78419640 78419714 -121210436 + MER5A DNA MER1_type 1 73 -116 637 121 0 0 chr5 78419716 78419799 -121210351 + AluSc SINE Alu 2 84 -225 209 33 33 0 chr5 78420265 78420295 -121209855 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 1811 64 0 9 chr5 78421019 78421238 -121208912 + AluSc SINE Alu 71 287 -22 828 296 93 21 chr5 78421429 78421804 -121208346 - LTR16C LTR ERVL 0 491 90 1746 216 67 60 chr5 78422305 78422843 -121207307 + MLT1F LTR MaLR 1 542 0 2908 260 116 75 chr5 78422958 78423869 -121206281 + HAL1 LINE L1 94 967 -1540 336 48 0 0 chr5 78423869 78423911 -121206239 + (CA)n Simple_repeat Simple_repeat 2 43 0 2908 260 116 75 chr5 78423911 78424989 -121205161 + HAL1 LINE L1 967 2163 -344 2094 144 24 44 chr5 78425001 78425384 -121204766 - THE1C LTR MaLR 0 375 1 1328 129 10 15 chr5 78425391 78425592 -121204558 + MSTB1 LTR MaLR 34 233 -199 1920 141 28 0 chr5 78425592 78425883 -121204267 - AluSx SINE Alu -13 299 1 14912 24 0 0 chr5 78428227 78430722 -121199428 + L1PA3 LINE L1 3672 6166 0 699 133 0 62 chr5 78430774 78430902 -121199248 - L1MA7 LINE L1 -10 6281 6162 390 186 0 0 chr5 78430902 78430972 -121199178 + L1MA7 LINE L1 6020 6089 -202 2165 111 0 0 chr5 78431335 78431623 -121198527 - AluSx SINE Alu 0 312 25 328 344 111 36 chr5 78432093 78432346 -121197804 - L1ME LINE L1 -393 5769 5498 739 298 68 4 chr5 78433220 78433455 -121196695 + MIR SINE MIR 6 255 -7 294 73 0 0 chr5 78434069 78434110 -121196040 + (GA)n Simple_repeat Simple_repeat 2 42 0 416 250 11 0 chr5 78435417 78435505 -121194645 + Charlie8 DNA MER1_type 32 120 -2297 280 224 15 15 chr5 78435505 78435572 -121194578 + L1ME LINE L1 5551 5617 -549 1761 200 81 21 chr5 78536144 78536623 -121093527 - Charlie4a DNA MER1_type 0 508 1 293 316 87 0 chr5 78536624 78536758 -121093392 + MIR SINE MIR 39 182 -67 194 279 23 0 chr5 78538921 78538964 -121091186 + L2 LINE L2 3214 3257 -15 2230 93 0 0 chr5 78539891 78540221 -121089929 + AluSg SINE Alu 1 330 0 564 268 87 0 chr5 78540648 78540831 -121089319 - MER58 DNA MER1_type -87 254 56 716 202 50 18 chr5 78541556 78541734 -121088416 - MSTD LTR MaLR 0 396 250 940 172 116 33 chr5 78541798 78541966 -121088184 - AluJo SINE Alu -7 305 114 207 0 0 0 chr5 78541966 78541989 -121088161 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 940 172 116 33 chr5 78541989 78542035 -121088115 - AluJo SINE Alu -198 114 73 750 212 7 0 chr5 78542037 78542174 -121087976 - MSTD LTR MaLR -256 140 3 1847 186 83 6 chr5 78542336 78542674 -121087476 - MLT1A1 LTR MaLR 0 365 2 676 228 0 29 chr5 78542770 78542906 -121087244 + FLAM_A SINE Alu 2 133 0 498 236 167 82 chr5 78543994 78544084 -121086066 - L1ME LINE L1 -752 5394 5313 2423 64 10 3 chr5 78544084 78544381 -121085769 - AluY SINE Alu -12 299 1 498 236 167 82 chr5 78544381 78544744 -121085406 - L1ME LINE L1 -833 5313 4902 452 311 115 25 chr5 78545519 78545840 -121084310 - L2 LINE L2 -367 2947 2598 613 167 78 14 chr5 78545984 78546128 -121084022 - MER45A DNA AcHobo 0 178 16 360 118 0 0 chr5 78546288 78546339 -121083811 - MER66A LTR ERV1 -141 337 287 2256 104 0 16 chr5 78546606 78546914 -121083236 - AluSq SINE Alu -10 303 1 2348 93 3 3 chr5 78547021 78547322 -121082828 + AluSp SINE Alu 1 301 -12 2635 128 3 11 chr5 78548534 78548901 -121081249 - THE1B LTR MaLR 0 364 1 209 327 208 0 chr5 78551256 78551357 -121078793 - MER91A DNA MER1_type -74 122 1 3813 175 35 21 chr5 78551553 78552314 -121077836 - L1MB4 LINE L1 0 6180 5409 1186 248 88 0 chr5 78552542 78552804 -121077346 - AluJo SINE Alu -17 285 1 338 291 40 26 chr5 78552807 78552958 -121077192 + Charlie8 DNA MER1_type 81 233 -2184 212 0 0 35 chr5 78554357 78554386 -121075764 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 189 164 0 45 chr5 78555459 78555526 -121074624 + (TA)n Simple_repeat Simple_repeat 1 64 0 304 200 21 84 chr5 78555527 78555622 -121074528 - L1MC4 LINE L1 -1340 6702 6614 300 274 140 24 chr5 78556335 78556499 -121073651 - L1ME4a LINE L1 -214 5907 5725 2020 122 14 0 chr5 78556712 78557000 -121073150 + AluSx SINE Alu 2 293 -19 403 289 47 55 chr5 78558597 78558832 -121071318 - MIR SINE MIR -5 257 25 608 289 93 9 chr5 78559087 78559312 -121070838 + MIR SINE MIR 8 251 -11 590 242 187 5 chr5 78559695 78559874 -121070276 - MIR SINE MIR -22 240 20 243 0 0 0 chr5 78559874 78559901 -121070249 + (TG)n Simple_repeat Simple_repeat 1 27 0 590 242 187 5 chr5 78559901 78559919 -121070231 - MIR SINE MIR -242 20 7 373 279 61 34 chr5 78559928 78560075 -121070075 - L2 LINE L2 -80 3233 3083 2137 131 59 59 chr5 78560091 78560481 -121069669 - MLT1B LTR MaLR 0 390 1 2234 171 32 15 chr5 78560482 78560891 -121069259 - MLT1B-int LTR MaLR -1 1370 955 10001 52 5 113 chr5 78560901 78562454 -121067696 - SVA Other Other 0 1386 1 2302 198 17 37 chr5 78562751 78563292 -121066858 - MLT1B-int LTR MaLR -500 871 253 4685 174 62 13 chr5 78564558 78565878 -121064272 + L1MB8 LINE L1 4781 6175 -3 204 297 22 44 chr5 78565950 78566041 -121064109 - MIR SINE MIR -138 124 36 290 250 0 0 chr5 78566290 78566350 -121063800 - MLT1J1 LTR MaLR -122 324 265 * 389 213 110 65 chr5 78566333 78566488 -121063662 - MLT1J2 LTR MaLR -198 252 91 4015 115 70 2 chr5 78566523 78567095 -121063055 - LTR9 LTR ERV1 0 612 2 253 328 30 30 chr5 78567874 78568008 -121062142 + MIR SINE MIR 129 262 0 187 404 37 0 chr5 78568173 78568282 -121061868 - L2 LINE L2 -6 3266 3154 2168 119 6 6 chr5 78568349 78568661 -121061489 - AluSx SINE Alu 0 312 1 475 209 68 68 chr5 78569256 78569433 -121060717 - MIR3 SINE MIR -14 194 18 2617 43 0 3 chr5 78569452 78569757 -121060393 - AluY SINE Alu -7 304 1 3073 129 75 73 chr5 78570213 78570719 -121059431 + MER6A DNA MER2_type 1 510 -355 1574 182 3 17 chr5 78570719 78571010 -121059140 - AluJo SINE Alu -23 289 3 3073 129 75 73 chr5 78571010 78571107 -121059043 + MER6A DNA MER2_type 510 605 0 1589 148 18 22 chr5 78571354 78571631 -121058519 - Tigger7 DNA MER2_type -3 2584 2309 1034 184 11 6 chr5 78571631 78571805 -121058345 - Tigger7 DNA MER2_type -2312 175 1 937 177 0 0 chr5 78573638 78573785 -121056365 + FRAM SINE Alu 1 146 -30 920 172 77 19 chr5 78573889 78574098 -121056052 + L1MC5 LINE L1 7689 7909 -52 224 333 50 10 chr5 78576168 78576267 -121053883 + L2 LINE L2 3170 3272 0 353 251 77 77 chr5 78576365 78576548 -121053602 + MER5A DNA MER1_type 7 189 0 384 315 168 23 chr5 78576645 78577262 -121052888 - L2 LINE L2 0 3313 2604 517 284 170 46 chr5 78577666 78577774 -121052376 + MIR SINE MIR 10 103 -159 1389 178 31 0 chr5 78577774 78577999 -121052151 + MER46A DNA MER2_type 1 232 -4 517 284 170 46 chr5 78577999 78578108 -121052042 + MIR SINE MIR 103 254 -8 318 301 27 82 chr5 78578158 78578341 -121051809 + MIR3 SINE MIR 30 202 -6 896 257 76 16 chr5 78579231 78579534 -121050616 - MER90 LTR ERV1 -147 428 108 227 349 12 0 chr5 78579781 78579867 -121050283 + MIR SINE MIR 54 140 -122 522 202 9 18 chr5 78579877 78579986 -121050164 - L1MC/D LINE L1 -558 5801 5694 196 250 139 0 chr5 78579995 78580067 -121050083 + MIR SINE MIR 137 218 -44 231 202 119 55 chr5 78580608 78580717 -121049433 + L1ME4a LINE L1 6006 6121 0 949 107 0 15 chr5 78581544 78581675 -121048475 + FLAM_C SINE Alu 11 139 -4 29 56 0 28 chr5 78581706 78581748 -121048402 + AT_rich Low_complexity Low_complexity 1 42 -28 1334 176 35 48 chr5 78581748 78582037 -121048113 - AluSx SINE Alu -26 286 2 29 56 0 28 chr5 78582037 78582066 -121048084 + AT_rich Low_complexity Low_complexity 42 70 0 1308 202 161 71 chr5 78582248 78582757 -121047393 - L1MD2 LINE L1 -2 6357 5803 1501 120 200 0 chr5 78582767 78583017 -121047133 - AluSx SINE Alu -12 300 1 1385 115 0 0 chr5 78583108 78583291 -121046859 - AluSx SINE Alu -129 183 1 309 317 61 0 chr5 78583922 78584004 -121046146 - L2 LINE L2 0 3272 3186 1803 109 0 44 chr5 78584167 78584441 -121045709 - AluSx SINE Alu -14 298 37 1721 130 134 4 chr5 78584861 78585122 -121045028 - AluSx SINE Alu -7 295 1 595 104 10 31 chr5 78585174 78585270 -121044880 + L1PA14 LINE L1 6066 6159 -2 687 293 122 30 chr5 78585287 78585762 -121044388 + L1ME4a LINE L1 5586 6104 -17 209 200 25 0 chr5 78585778 78585818 -121044332 + (TG)n Simple_repeat Simple_repeat 2 42 0 2303 96 0 3 chr5 78588872 78589164 -121040986 - AluSc SINE Alu -18 291 1 400 221 36 43 chr5 78589193 78589333 -121040817 - L1ME4a LINE L1 -1 6120 5982 22 0 0 0 chr5 78589990 78590012 -121040138 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 78590207 78590231 -121039919 + AT_rich Low_complexity Low_complexity 1 24 0 2224 116 0 7 chr5 78590546 78590849 -121039301 + AluSx SINE Alu 1 301 -11 1002 99 35 0 chr5 78590849 78591018 -121039132 + AluSc SINE Alu 140 313 0 398 309 30 15 chr5 78591197 78591398 -121038752 - L1MC4 LINE L1 -1023 7019 6816 651 253 86 6 chr5 78592534 78592708 -121037442 - MIR SINE MIR -17 245 58 592 314 16 11 chr5 78592868 78593059 -121037091 - MIR3 SINE MIR -7 201 10 209 32 0 32 chr5 78593328 78593359 -121036791 + (CTA)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr5 78594038 78594059 -121036091 + AT_rich Low_complexity Low_complexity 1 21 0 2244 101 3 7 chr5 78594418 78594715 -121035435 - AluSx SINE Alu -16 296 1 195 47 0 163 chr5 78595475 78595518 -121034632 - L2 LINE L2 0 3313 3278 2268 115 3 3 chr5 78596044 78596357 -121033793 - AluSp SINE Alu 0 313 1 350 227 41 21 chr5 78597017 78597114 -121033036 + L1M2 LINE L1 5338 5436 -855 486 321 45 52 chr5 78597783 78598051 -121032099 + L1ME LINE L1 5543 5808 -313 2058 114 30 14 chr5 78598231 78598528 -121031622 + AluSg SINE Alu 1 302 -8 290 240 93 0 chr5 78599301 78599376 -121030774 + MIR3 SINE MIR 97 178 -30 2538 47 7 3 chr5 78599592 78599893 -121030257 + AluY SINE Alu 1 302 -9 1774 144 3 38 chr5 78601367 78601659 -121028491 + AluJb SINE Alu 3 284 -28 301 250 0 0 chr5 78603076 78603156 -121026994 + MER116 DNA Mariner 1 80 0 238 298 46 53 chr5 78603156 78603287 -121026863 + L2 LINE L2 3139 3268 -4 2121 132 0 13 chr5 78605245 78605548 -121024602 + AluSg SINE Alu 1 299 -11 735 211 0 0 chr5 78605816 78605949 -121024201 - FLAM_C SINE Alu 0 133 1 1695 164 11 7 chr5 78606038 78606325 -121023825 + AluJo SINE Alu 1 288 -24 294 29 0 0 chr5 78606325 78606360 -121023790 + (GA)n Simple_repeat Simple_repeat 2 36 0 1754 133 224 11 chr5 78607070 78607423 -121022727 - MSTA LTR MaLR 0 428 1 27 73 0 0 chr5 78608836 78608891 -121021259 + AT_rich Low_complexity Low_complexity 1 55 0 375 268 139 43 chr5 78608956 78609509 -121020641 + L1ME4a LINE L1 5312 5917 -204 737 183 33 0 chr5 78609657 78609777 -121020373 + FLAM_C SINE Alu 1 124 -19 24 32 0 0 chr5 78610131 78610162 -121019988 + AT_rich Low_complexity Low_complexity 1 31 0 1139 145 0 0 chr5 78610559 78610731 -121019419 + AluSp SINE Alu 137 308 -5 22 35 0 0 chr5 78610823 78610852 -121019298 + AT_rich Low_complexity Low_complexity 1 29 0 310 294 0 24 chr5 78611837 78611922 -121018228 - MIR3 SINE MIR -9 199 117 201 261 22 0 chr5 78612840 78612886 -121017264 - L2 LINE L2 -81 3191 3145 24 53 0 0 chr5 78613124 78613162 -121016988 + AT_rich Low_complexity Low_complexity 1 38 0 374 351 87 27 chr5 78613353 78613538 -121016612 + MER91A DNA MER1_type 1 196 0 189 306 149 33 chr5 78614192 78614313 -121015837 + L2 LINE L2 3175 3309 -4 3973 54 36 11 chr5 78614537 78615071 -121015079 - L1PA7 LINE L1 -1 6153 5607 848 138 8 0 chr5 78615921 78616051 -121014099 - FLAM_C SINE Alu -2 131 1 270 245 0 49 chr5 78616967 78617069 -121013081 - Charlie7 DNA MER1_type -51 2561 2465 326 159 14 0 chr5 78620368 78620437 -121009713 + (TG)n Simple_repeat Simple_repeat 2 71 0 294 29 0 0 chr5 78620599 78620634 -121009516 + (TC)n Simple_repeat Simple_repeat 2 36 0 * 351 0 0 0 chr5 78620633 78620672 -121009478 + (TA)n Simple_repeat Simple_repeat 2 40 0 1066 97 0 39 chr5 78620672 78620826 -121009324 - AluSg/x SINE Alu -1 311 164 991 121 22 28 chr5 78620827 78621009 -121009141 + L1M4 LINE L1 5335 5515 -663 869 117 15 0 chr5 78621009 78621146 -121009004 + AluSg/x SINE Alu 168 306 -6 853 224 33 54 chr5 78621154 78621485 -121008665 - L1M4 LINE L1 -1538 4608 4285 208 208 83 28 chr5 78622575 78622647 -121007503 - MIR SINE MIR -9 253 178 324 311 116 58 chr5 78622875 78623152 -121006998 + HAL1b LINE L1 105 397 -951 2246 128 0 0 chr5 78623639 78623943 -121006207 - AluSx SINE Alu -8 304 1 3400 53 7 0 chr5 78624197 78624627 -121005523 - L1PA7 LINE L1 -3 6151 5719 308 293 60 42 chr5 78624647 78624795 -121005355 + L1MC/D LINE L1 4029 4182 -1964 2019 146 16 3 chr5 78624795 78625103 -121005047 + AluSq SINE Alu 1 312 -1 308 293 60 42 chr5 78625103 78625121 -121005029 + L1MC/D LINE L1 4182 4198 -1948 1873 138 6 58 chr5 78625287 78625614 -121004536 + AluSx SINE Alu 1 310 -2 241 241 0 0 chr5 78625709 78625767 -121004383 + L1MC/D LINE L1 5689 5746 -2062 264 260 164 45 chr5 78626154 78626331 -121003819 - MIR SINE MIR -41 221 24 613 259 53 18 chr5 78626435 78626605 -121003545 + MIR SINE MIR 31 206 -56 2086 109 7 0 chr5 78626786 78627079 -121003071 - AluSx SINE Alu -17 295 1 180 291 0 36 chr5 78627399 78627454 -121002696 + MIR SINE MIR 23 75 -133 913 158 0 0 chr5 78627702 78627835 -121002315 - FLAM_A SINE Alu 0 133 1 22 56 0 0 chr5 78629213 78629249 -121000901 + AT_rich Low_complexity Low_complexity 1 36 0 1821 154 10 29 chr5 78629655 78629961 -121000189 + AluJo SINE Alu 1 300 -12 1698 110 103 22 chr5 78630255 78630527 -120999623 + AluSx SINE Alu 6 299 -13 486 317 106 53 chr5 78632358 78632481 -120997669 - L2 LINE L2 -467 2847 2732 1941 188 121 32 chr5 78632481 78632598 -120997552 + MLT1D LTR MaLR 1 106 -399 2541 42 7 7 chr5 78632598 78632904 -120997246 - AluY SINE Alu -5 306 1 1941 188 121 32 chr5 78632904 78633250 -120996900 + MLT1D LTR MaLR 106 505 0 486 317 106 53 chr5 78633250 78633887 -120996263 - L2 LINE L2 -582 2732 2046 1520 52 26 0 chr5 78634988 78635180 -120994970 + MER107 DNA MER1_type 1 197 0 21 0 0 0 chr5 78635711 78635732 -120994418 + AT_rich Low_complexity Low_complexity 1 21 0 658 108 0 0 chr5 78637204 78637306 -120992844 - L1MB2 LINE L1 -2 6169 6068 1968 113 74 0 chr5 78637879 78638163 -120991987 + AluSx SINE Alu 1 305 -7 2150 130 10 0 chr5 78639353 78639661 -120990489 - AluSx SINE Alu -1 311 1 191 310 42 28 chr5 78639664 78639735 -120990415 + L2 LINE L2 3123 3194 -78 339 240 250 0 chr5 78639751 78639847 -120990303 - MER119 DNA MER1_type -463 120 1 459 326 44 36 chr5 78639855 78640341 -120989809 - L2 LINE L2 -225 3088 2537 233 62 0 0 chr5 78640938 78640970 -120989180 - MLT2C1 LTR ERVL -9 388 357 3065 184 28 2 chr5 78640970 78641551 -120988599 + ERVL LTR ERVL 1623 2218 -3546 758 159 86 69 chr5 78642617 78642849 -120987301 - MER106A DNA MER1_type 0 236 1 183 323 32 0 chr5 78645595 78645657 -120984493 - MIR3 SINE MIR -19 189 126 1062 163 74 0 chr5 78646361 78646631 -120983519 - L1M4 LINE L1 -1550 4596 4307 * 2156 186 42 28 chr5 78646623 78647118 -120983032 - L1MB7 LINE L1 -16 6168 5667 567 231 23 40 chr5 78647221 78647352 -120982798 + MER58B DNA MER1_type 172 301 -2119 1739 159 10 13 chr5 78647352 78647653 -120982497 - AluSx SINE Alu -12 300 1 567 231 23 40 chr5 78647653 78647694 -120982456 + MER58B DNA MER1_type 301 341 0 1489 168 60 14 chr5 78648656 78648941 -120981209 + AluJb SINE Alu 1 298 -14 195 204 0 0 chr5 78648945 78648989 -120981161 + G-rich Low_complexity Low_complexity 3 46 0 403 289 47 55 chr5 78649798 78650033 -120980117 - MIR SINE MIR -5 257 25 608 289 93 9 chr5 78650288 78650513 -120979637 + MIR SINE MIR 8 251 -11 590 242 187 5 chr5 78650896 78651075 -120979075 - MIR SINE MIR -22 240 20 243 0 0 0 chr5 78651075 78651102 -120979048 + (TG)n Simple_repeat Simple_repeat 1 27 0 590 242 187 5 chr5 78651102 78651120 -120979030 - MIR SINE MIR -242 20 7 373 279 61 34 chr5 78651129 78651276 -120978874 - L2 LINE L2 -80 3233 3083 2137 131 59 59 chr5 78651292 78651682 -120978468 - MLT1B LTR MaLR 0 390 1 2234 171 32 15 chr5 78651683 78652092 -120978058 - MLT1B-int LTR MaLR -1 1370 955 10043 50 5 112 chr5 78652102 78653653 -120976497 - SVA Other Other 0 1386 1 2302 198 17 37 chr5 78653949 78654490 -120975660 - MLT1B-int LTR MaLR -500 871 253 4685 174 62 13 chr5 78655756 78657076 -120973074 + L1MB8 LINE L1 4781 6175 -3 204 297 22 44 chr5 78657148 78657239 -120972911 - MIR SINE MIR -138 124 36 290 250 0 0 chr5 78657488 78657548 -120972602 - MLT1J1 LTR MaLR -122 324 265 * 389 213 110 65 chr5 78657531 78657686 -120972464 - MLT1J2 LTR MaLR -198 252 91 4000 113 70 3 chr5 78657721 78658294 -120971856 - LTR9 LTR ERV1 0 612 2 253 328 30 30 chr5 78659073 78659207 -120970943 + MIR SINE MIR 129 262 0 187 404 37 0 chr5 78659372 78659481 -120970669 - L2 LINE L2 -6 3266 3154 2168 119 6 6 chr5 78659548 78659860 -120970290 - AluSx SINE Alu 0 312 1 475 209 68 68 chr5 78660455 78660632 -120969518 - MIR3 SINE MIR -14 194 18 2617 43 0 3 chr5 78660651 78660956 -120969194 - AluY SINE Alu -7 304 1 3090 131 73 73 chr5 78661412 78661919 -120968231 + MER6A DNA MER2_type 1 510 -355 1574 182 3 17 chr5 78661919 78662210 -120967940 - AluJo SINE Alu -23 289 3 3090 131 73 73 chr5 78662210 78662307 -120967843 + MER6A DNA MER2_type 509 605 0 1589 148 18 22 chr5 78662554 78662831 -120967319 - Tigger7 DNA MER2_type -3 2584 2309 1034 184 11 6 chr5 78662831 78663005 -120967145 - Tigger7 DNA MER2_type -558 175 1 944 196 0 0 chr5 78664838 78665001 -120965149 + FRAM SINE Alu 1 162 -14 1385 116 0 0 chr5 78667387 78667568 -120962582 + AluSq SINE Alu 101 281 -32 254 211 8 117 chr5 78668309 78668437 -120961713 - MIR SINE MIR -53 209 96 1007 171 73 15 chr5 78670038 78670312 -120959838 - L1M4 LINE L1 -1550 4596 4307 * 2323 189 40 34 chr5 78670304 78670891 -120959259 - L1MB7 LINE L1 -16 6168 4251 808 219 27 37 chr5 78670891 78671037 -120959113 + MER58A DNA MER1_type 40 185 -2235 2157 117 10 3 chr5 78671037 78671335 -120958815 - AluSx SINE Alu -12 300 1 808 219 27 37 chr5 78671335 78671375 -120958775 + MER58A DNA MER1_type 185 224 0 900 177 43 0 chr5 78672328 78672492 -120957658 + AluJo SINE Alu 1 171 -141 12951 94 4 16 chr5 78672595 78673460 -120956690 - L1P LINE L1 -1899 4247 3374 2928 3 0 0 chr5 78673460 78673771 -120956379 - AluY SINE Alu 0 311 1 12951 94 4 16 chr5 78673771 78674815 -120955335 - L1P LINE L1 -2772 3374 2360 336 259 9 56 chr5 78675877 78675985 -120954165 + L2 LINE L2 3207 3309 -4 830 141 87 34 chr5 78676869 78677018 -120953132 - AluJb SINE Alu -33 279 123 52 64 0 0 chr5 78677022 78677116 -120953034 + AT_rich Low_complexity Low_complexity 1 94 0 1778 149 30 20 chr5 78677924 78678226 -120951924 + AluJb SINE Alu 6 310 -2 935 303 193 21 chr5 78678503 78678799 -120951351 + L2 LINE L2 1874 2118 -1196 1036 201 107 63 chr5 78678799 78679118 -120951032 - MER46C DNA MER2_type -2 336 4 935 303 193 21 chr5 78679118 78679597 -120950553 + L2 LINE L2 2118 2783 -531 406 75 0 0 chr5 78679597 78679650 -120950500 - MADE1 DNA Mariner -27 53 1 389 315 110 49 chr5 78679652 78680099 -120950051 + L2 LINE L2 2809 3282 -31 528 221 71 0 chr5 78680237 78680364 -120949786 - L2 LINE L2 -17 3296 3161 10988 79 3 12 chr5 78680562 78682038 -120948112 + HERV9 LTR ERV1 6937 8399 0 2300 180 18 36 chr5 78682045 78682607 -120947543 + pTR5 LTR ERV1 795 1346 -1092 4866 114 52 0 chr5 78682621 78683269 -120946881 + LTR12 LTR ERV1 5 686 -2 1875 261 88 18 chr5 78683433 78683978 -120946172 - MLT1G1 LTR MaLR -9 586 4 687 253 112 0 chr5 78684191 78684369 -120945781 + MIR SINE MIR 41 238 -24 284 179 48 54 chr5 78685238 78685327 -120944823 - MER63 DNA MER1_type 0 1688 744 222 200 0 0 chr5 78685706 78685746 -120944404 + (CATA)n Simple_repeat Simple_repeat 3 42 0 2408 78 0 0 chr5 78685790 78686084 -120944066 + AluY SINE Alu 1 294 -17 2167 114 7 0 chr5 78686094 78686392 -120943758 + AluSx SINE Alu 1 300 -12 1859 168 10 0 chr5 78686706 78687010 -120943140 - AluSx SINE Alu -5 307 1 657 184 26 0 chr5 78687577 78687691 -120942459 + FLAM_A SINE Alu 13 129 -13 814 128 0 8 chr5 78687794 78687911 -120942239 - FLAM_C SINE Alu -19 124 9 720 180 23 0 chr5 78688470 78688598 -120941552 + Tigger1 DNA MER2_type 7 137 -2281 465 80 136 0 chr5 78688604 78688692 -120941458 + Tigger1 DNA MER2_type 2202 2301 -117 28955 32 6 1 chr5 78688893 78692376 -120937774 - L1P LINE L1 -820 5326 1826 244 380 0 0 chr5 78692376 78692455 -120937695 + L2 LINE L2 2992 3070 -202 22 70 0 0 chr5 78692501 78692544 -120937606 + AT_rich Low_complexity Low_complexity 1 43 0 199 153 153 34 chr5 78692569 78692628 -120937522 + L2 LINE L2 3242 3307 -6 189 0 0 0 chr5 78692670 78692691 -120937459 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 2259 112 7 0 chr5 78693417 78693712 -120936438 + AluSq SINE Alu 1 297 -16 403 276 108 56 chr5 78693944 78694212 -120935938 + MLT1K LTR MaLR 295 576 -12 256 273 133 8 chr5 78694229 78694357 -120935793 + MER117 DNA MER1_type 3 146 -51 556 261 117 16 chr5 78694846 78695034 -120935116 + MIR SINE MIR 56 262 0 2049 125 17 10 chr5 78697338 78697635 -120932515 - AluSx SINE Alu -13 299 1 6170 135 50 36 chr5 78698058 78698151 -120931999 - Tigger3b DNA MER2_type -1798 1230 1140 2231 136 3 0 chr5 78698151 78698459 -120931691 + AluSx SINE Alu 1 309 -3 6170 135 50 36 chr5 78698459 78699185 -120930965 - Tigger3b DNA MER2_type -1888 1140 386 2090 135 3 0 chr5 78699185 78699482 -120930668 + AluSx SINE Alu 1 298 -14 6170 135 50 36 chr5 78699482 78699873 -120930277 - Tigger3b DNA MER2_type -2642 386 2 2362 87 7 0 chr5 78699897 78700195 -120929955 + AluSc SINE Alu 1 300 -9 316 188 29 0 chr5 78701156 78701225 -120928925 + MER103 DNA DNA 9 79 -87 2056 102 3 61 chr5 78701227 78701540 -120928610 - AluSg SINE Alu -15 295 1 2338 92 3 3 chr5 78701835 78702141 -120928009 - AluSg SINE Alu -2 308 3 1778 143 5 70 chr5 78702297 78702317 -120927833 + MER46B DNA MER2_type 1 21 -2710 2426 88 0 0 chr5 78702317 78702623 -120927527 + AluSq SINE Alu 1 306 -7 1778 143 5 70 chr5 78702623 78702779 -120927371 + MER46B DNA MER2_type 21 17 -2714 2213 80 13 13 chr5 78702779 78703090 -120927060 + AluY SINE Alu 1 311 0 1778 143 5 70 chr5 78703090 78703298 -120926852 + MER46B DNA MER2_type 16 236 0 303 218 39 0 chr5 78703702 78703780 -120926370 + L1ME LINE L1 1296 1376 -5164 426 246 9 70 chr5 78703984 78704199 -120925951 + L1ME LINE L1 1591 1792 -4929 22 0 0 0 chr5 78704286 78704308 -120925842 + AT_rich Low_complexity Low_complexity 1 22 0 775 220 65 67 chr5 78704353 78704497 -120925653 + L1MC5 LINE L1 7179 7322 -639 2150 103 3 7 chr5 78704497 78704789 -120925361 + AluSx SINE Alu 4 294 -18 775 220 65 67 chr5 78704789 78705016 -120925134 + L1MC5 LINE L1 7322 7549 -412 1426 166 120 12 chr5 78705021 78705280 -120924870 + AluJb SINE Alu 1 287 -25 931 307 41 4 chr5 78705290 78705778 -120924372 + L1ME LINE L1 3750 4255 -2285 1005 261 26 32 chr5 78705801 78706165 -120923985 + L1ME LINE L1 5771 6134 -381 439 222 0 0 chr5 78706163 78706262 -120923888 + L1M4 LINE L1 4661 4759 -1387 * 1387 161 60 85 chr5 78706270 78706586 -120923564 + AluJb SINE Alu 5 312 0 1028 48 0 62 chr5 78706590 78706735 -120923415 + L1PA7 LINE L1 6003 6138 -16 2197 81 17 7 chr5 78706743 78707039 -120923111 + AluY SINE Alu 1 299 -12 892 198 0 47 chr5 78707040 78707272 -120922878 + L1M4 LINE L1 4876 5096 -1050 684 228 11 0 chr5 78707385 78707574 -120922576 + L1M4 LINE L1 5104 5294 -852 2570 102 3 0 chr5 78707577 78707941 -120922209 + L1P3 LINE L1 1 365 -6096 2315 109 0 14 chr5 78707937 78708451 -120921699 + L1P3 LINE L1 1406 1903 -4558 * 229 244 51 13 chr5 78708551 78708629 -120921521 - MER63 DNA MER1_type -129 707 1 2256 102 14 0 chr5 78709101 78709394 -120920756 + AluSx SINE Alu 1 297 -15 2259 95 3 7 chr5 78709543 78709848 -120920302 + AluY SINE Alu 1 304 -7 237 230 170 30 chr5 78709911 78710011 -120920139 + HAL1 LINE L1 1262 1375 -1132 2315 77 0 7 chr5 78710820 78711119 -120919031 + AluY SINE Alu 1 297 -14 1129 76 45 0 chr5 78711324 78711481 -120918669 - AluY SINE Alu -15 296 133 2478 49 0 20 chr5 78711481 78711785 -120918365 - AluY SINE Alu -13 298 1 1661 188 0 14 chr5 78711796 78712089 -120918061 - AluJo SINE Alu -23 289 1 2057 144 0 0 chr5 78712118 78712416 -120917734 + AluSx SINE Alu 1 298 -14 204 226 0 0 chr5 78712667 78712720 -120917430 + T-rich Low_complexity Low_complexity 1 53 0 2156 80 10 3 chr5 78712784 78713072 -120917078 + AluSc SINE Alu 1 290 -19 349 252 47 0 chr5 78713176 78713303 -120916847 + (TA)n Simple_repeat Simple_repeat 2 134 0 747 271 57 20 chr5 78713426 78713670 -120916480 + L2 LINE L2 2652 2904 -410 26 39 0 20 chr5 78713801 78713839 -120916311 + AT_rich Low_complexity Low_complexity 1 39 -11 2171 111 3 0 chr5 78713839 78714127 -120916023 - AluSq SINE Alu -24 289 1 26 39 0 20 chr5 78714127 78714139 -120916011 + AT_rich Low_complexity Low_complexity 39 50 0 2011 119 0 17 chr5 78714139 78714432 -120915718 - AluJb SINE Alu -24 288 1 963 228 10 5 chr5 78714435 78714643 -120915507 - MIR SINE MIR -54 208 2 1161 153 26 0 chr5 78714665 78714893 -120915257 - L1MA8 LINE L1 -7 6284 6051 505 214 71 125 chr5 78714923 78715147 -120915003 + L2 LINE L2 3102 3313 0 2328 97 0 7 chr5 78715685 78715984 -120914166 - AluSx SINE Alu -15 297 1 2233 89 27 3 chr5 78716326 78716619 -120913531 - AluSx SINE Alu -10 302 3 2032 90 14 4 chr5 78716797 78717104 -120913046 + AluSg SINE Alu 1 310 0 544 268 35 0 chr5 78717263 78717405 -120912745 + MIR SINE MIR 66 212 -50 2054 262 123 55 chr5 78717506 78718240 -120911910 + L2 LINE L2 1547 2230 -1084 2161 121 3 10 chr5 78718240 78718546 -120911604 + AluSx SINE Alu 1 304 -8 2054 262 123 55 chr5 78718546 78718874 -120911276 + L2 LINE L2 2230 2687 -627 2300 98 0 0 chr5 78718874 78719170 -120910980 - AluSx SINE Alu -16 296 1 2054 262 123 55 chr5 78719170 78719195 -120910955 + L2 LINE L2 2687 2709 -605 28 0 0 0 chr5 78720613 78720641 -120909509 + AT_rich Low_complexity Low_complexity 1 28 0 300 151 151 92 chr5 78721985 78722104 -120908046 - L1MC4 LINE L1 -105 7937 7812 962 194 44 6 chr5 78722161 78722341 -120907809 - MER5A DNA MER1_type 0 189 3 400 259 163 48 chr5 78722389 78722536 -120907614 - MER5A DNA MER1_type 0 189 26 316 241 103 0 chr5 78722531 78722618 -120907532 + MER5B DNA MER1_type 5 100 -78 * 2265 123 0 0 chr5 78722619 78722929 -120907221 + AluSx SINE Alu 1 310 -2 2336 173 19 7 chr5 78723007 78723428 -120906722 + MSTB LTR MaLR 1 426 0 281 216 54 40 chr5 78723700 78723774 -120906376 + L2 LINE L2 2397 2471 -843 347 260 110 0 chr5 78723774 78723791 -120906359 - L1MA10 LINE L1 -2 6332 6316 3087 194 63 48 chr5 78723791 78724015 -120906135 - L1ME1 LINE L1 -10 6156 5937 2271 99 10 3 chr5 78724015 78724317 -120905833 + AluSg SINE Alu 1 304 -6 3087 194 63 48 chr5 78724317 78724749 -120905401 - L1ME1 LINE L1 -229 5937 5483 1700 172 14 10 chr5 78724749 78725045 -120905105 - AluJb SINE Alu -15 297 1 3087 194 63 48 chr5 78725045 78725218 -120904932 - L1ME1 LINE L1 -683 5483 5314 635 187 7 7 chr5 78725257 78725412 -120904738 - L1MD3 LINE L1 -939 7056 6902 603 180 34 48 chr5 78725410 78725616 -120904534 + L1M4 LINE L1 5024 5226 -920 * 243 79 0 0 chr5 78725923 78725961 -120904189 + (A)n Simple_repeat Simple_repeat 1 38 0 2111 141 0 3 chr5 78725969 78726275 -120903875 + AluSx SINE Alu 1 305 -7 2203 105 0 30 chr5 78726478 78726782 -120903368 - AluSq SINE Alu -18 295 1 269 267 35 35 chr5 78726801 78726887 -120903263 + L2 LINE L2 2606 2691 -623 408 133 0 0 chr5 78726887 78726947 -120903203 - AluS SINE Alu -258 60 1 1271 129 0 10 chr5 78727268 78727282 -120902868 + AluSq SINE Alu 121 134 -179 2389 99 0 0 chr5 78727282 78727585 -120902565 + AluSq SINE Alu 1 303 -10 1271 129 0 10 chr5 78727585 78727763 -120902387 + AluSq SINE Alu 134 311 -2 492 171 0 16 chr5 78728116 78728211 -120901939 - MIR SINE MIR -58 204 113 2022 115 11 0 chr5 78728224 78728511 -120901639 + AluSg SINE Alu 1 290 -20 1906 159 7 3 chr5 78728990 78729280 -120900870 + AluJo SINE Alu 1 291 -21 299 116 0 0 chr5 78732692 78732735 -120897415 - THE1B LTR MaLR 0 355 313 2183 106 0 3 chr5 78732735 78733019 -120897131 + AluSq SINE Alu 1 283 -30 1782 131 36 39 chr5 78733033 78733370 -120896780 - THE1B LTR MaLR -28 336 1 1913 158 0 10 chr5 78733834 78734138 -120896012 + AluSx SINE Alu 1 301 -11 2284 102 13 3 chr5 78734497 78734801 -120895349 - AluSg SINE Alu -1 309 3 240 263 21 63 chr5 78734942 78735037 -120895113 + MIR SINE MIR 164 254 -8 1652 185 3 32 chr5 78735974 78736282 -120893868 + AluJb SINE Alu 1 299 -13 25 31 0 0 chr5 78737333 78737365 -120892785 + AT_rich Low_complexity Low_complexity 1 32 0 213 39 0 0 chr5 78739013 78739039 -120891111 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 30 59 0 0 chr5 78739531 78739582 -120890568 + AT_rich Low_complexity Low_complexity 1 51 0 2156 137 3 0 chr5 78743162 78743469 -120886681 - AluSx SINE Alu -4 308 1 1522 122 33 76 chr5 78744291 78744595 -120885555 - AluSx SINE Alu -20 292 2 351 290 181 45 chr5 78744958 78745179 -120884971 - L1ME LINE L1 -344 5777 5527 1034 274 265 27 chr5 78745298 78746217 -120883933 - L2 LINE L2 -85 3228 2078 801 168 15 0 chr5 78746794 78746925 -120883225 + FLAM_C SINE Alu 1 133 0 1427 181 12 12 chr5 78746941 78747195 -120882955 + AluJo SINE Alu 34 287 -25 303 336 96 0 chr5 78747419 78747544 -120882606 + L1MC/D LINE L1 5474 5610 -2198 299 270 82 86 chr5 78747637 78747941 -120882209 + L1ME LINE L1 5448 5750 -412 192 40 0 0 chr5 78748250 78748275 -120881875 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 2272 103 0 10 chr5 78748323 78748635 -120881515 - AluSq SINE Alu 0 313 5 256 146 0 0 chr5 78748786 78748827 -120881323 - MADE1 DNA Mariner 0 80 40 351 248 170 33 chr5 78749464 78749617 -120880533 - MER5A DNA MER1_type -7 182 9 546 246 0 16 chr5 78749678 78749800 -120880350 + L2 LINE L2 3192 3311 -2 400 233 267 45 chr5 78749807 78749983 -120880167 - MIR SINE MIR -47 215 1 1328 116 40 5 chr5 78750926 78751125 -120879025 - THE1C LTR MaLR -169 206 1 355 265 43 28 chr5 78751134 78751312 -120878838 - L1MEd LINE L1 -839 1811 1308 2367 70 0 7 chr5 78751312 78751663 -120878487 - AluSp SINE Alu 0 351 3 923 295 111 51 chr5 78751784 78751943 -120878207 - L1MEd LINE L1 -4862 1257 1109 399 21 0 0 chr5 78751943 78751991 -120878159 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 2050 105 0 7 chr5 78751991 78752267 -120877883 - AluSx SINE Alu -38 274 1 923 295 111 51 chr5 78752267 78752511 -120877639 - L1MEd LINE L1 -5010 1109 881 1757 165 46 0 chr5 78752511 78752796 -120877354 - AluJo SINE Alu -14 298 1 923 295 111 51 chr5 78752796 78753268 -120876882 - L1MEd LINE L1 -5238 881 328 2249 98 9 25 chr5 78753407 78753723 -120876427 + AluSx SINE Alu 1 311 -1 39303 97 32 24 chr5 78753730 78760379 -120869771 + HERV9 LTR ERV1 17 5194 -32 550 291 26 11 chr5 78760503 78760692 -120869458 + MLT1I LTR MaLR 218 409 0 268 259 12 12 chr5 78760896 78760977 -120869173 + L2 LINE L2 3171 3251 -62 226 343 80 55 chr5 78762370 78762571 -120867579 - L2 LINE L2 -1941 1373 1168 1578 135 128 14 chr5 78762834 78763123 -120867027 - MER44D DNA MER2_type 0 609 18 196 283 94 19 chr5 78763162 78763268 -120866882 + MIR SINE MIR 121 234 -28 2352 103 0 13 chr5 78763769 78764081 -120866069 - AluSx SINE Alu -4 308 1 862 142 0 8 chr5 78764365 78764499 -120865651 + FLAM_C SINE Alu 1 133 -10 24 32 0 0 chr5 78764499 78764530 -120865620 + AT_rich Low_complexity Low_complexity 1 31 0 1424 172 75 0 chr5 78764530 78764648 -120865502 + AluJo SINE Alu 1 109 -203 207 0 0 0 chr5 78764648 78764671 -120865479 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1424 172 75 0 chr5 78764671 78764831 -120865319 + AluJo SINE Alu 109 300 -12 24 53 0 0 chr5 78764863 78764901 -120865249 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 78765833 78765854 -120864296 + AT_rich Low_complexity Low_complexity 1 21 0 1397 139 171 19 chr5 78765922 78766180 -120863970 - AluJo SINE Alu -15 297 1 1163 125 0 18 chr5 78766367 78766535 -120863615 - AluJ SINE Alu -3 309 145 849 170 0 28 chr5 78766583 78766724 -120863426 - AluJ SINE Alu -171 141 5 1507 178 20 38 chr5 78766935 78767053 -120863097 + AluJo SINE Alu 1 119 -193 2263 98 3 7 chr5 78767053 78767349 -120862801 - AluSp SINE Alu -18 295 1 2212 115 7 0 chr5 78767349 78767652 -120862498 - AluSq SINE Alu -7 306 1 1507 178 20 38 chr5 78767652 78767825 -120862325 + AluJo SINE Alu 117 288 -24 195 139 0 0 chr5 78767825 78767861 -120862289 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 2250 122 3 0 chr5 78768161 78768464 -120861686 + AluSx SINE Alu 1 304 -8 287 293 90 38 chr5 78768664 78768797 -120861353 - MER91A DNA MER1_type -7 189 50 958 151 0 35 chr5 78768847 78769019 -120861131 + FRAM SINE Alu 1 165 -11 2556 57 0 0 chr5 78769339 78769637 -120860513 - AluY SINE Alu -13 298 1 29 0 0 0 chr5 78770950 78770979 -120859171 + GC_rich Low_complexity Low_complexity 1 29 0 2352 100 0 0 chr5 78771582 78771883 -120858267 - AluSq SINE Alu -12 301 1 2139 153 73 46 chr5 78771932 78772297 -120857853 + MSTC LTR MaLR 1 380 -48 2046 111 31 3 chr5 78772297 78772585 -120857565 + AluSx SINE Alu 1 296 -16 2139 153 73 46 chr5 78772585 78772631 -120857519 + MSTC LTR MaLR 380 423 -5 6240 97 8 0 chr5 78772716 78773982 -120856168 - L1PA14 LINE L1 -3 6158 4868 839 216 238 19 chr5 78773991 78774260 -120855890 - HsTC2a DNA Tc2 -366 378 51 313 252 213 55 chr5 78774322 78774632 -120855518 - L1MEd LINE L1 -4866 1253 895 21 0 0 0 chr5 78774738 78774759 -120855391 + AT_rich Low_complexity Low_complexity 1 21 0 266 154 0 0 chr5 78775631 78775670 -120854480 - MER4E LTR ERV1 -74 692 654 941 294 86 19 chr5 78776674 78777045 -120853105 + L2 LINE L2 2918 3313 0 228 185 19 37 chr5 78777390 78777444 -120852706 + GA-rich Low_complexity Low_complexity 4 56 0 280 242 0 0 chr5 78777504 78777566 -120852584 - L2 LINE L2 0 3313 3252 1805 168 7 3 chr5 78777646 78777938 -120852212 + AluJo SINE Alu 1 293 -19 21 0 0 0 chr5 78778105 78778126 -120852024 + AT_rich Low_complexity Low_complexity 1 21 0 2310 115 0 0 chr5 78778190 78778494 -120851656 - AluSg SINE Alu -6 304 1 2237 112 0 3 chr5 78778610 78778915 -120851235 - AluSx SINE Alu -8 304 1 28 0 0 0 chr5 78780137 78780165 -120849985 + AT_rich Low_complexity Low_complexity 1 28 0 2406 103 0 0 chr5 78780180 78780482 -120849668 + AluSx SINE Alu 1 302 -10 2261 109 3 0 chr5 78780628 78780932 -120849218 + AluSq SINE Alu 1 305 -8 224 211 123 0 chr5 78781005 78781062 -120849088 - L2 LINE L2 0 3272 3209 2133 226 96 10 chr5 78781510 78782010 -120848140 - Zaphod DNA AcHobo -3482 549 7 22 70 0 0 chr5 78783496 78783539 -120846611 + GC_rich Low_complexity Low_complexity 1 43 0 29 47 0 0 chr5 78783787 78783830 -120846320 + GC_rich Low_complexity Low_complexity 1 43 0 3939 169 70 42 chr5 78784651 78786167 -120843983 - L1MB7 LINE L1 0 6184 4625 259 196 0 0 chr5 78786365 78786421 -120843729 - L1M4 LINE L1 -455 5729 5674 1957 153 7 7 chr5 78786670 78786971 -120843179 + AluJo SINE Alu 1 301 -11 1561 228 0 0 chr5 78787213 78787525 -120842625 - AluJo SINE Alu 0 312 1 2316 84 13 0 chr5 78789038 78789337 -120840813 - AluSp SINE Alu -10 303 1 2302 100 0 0 chr5 78790059 78790350 -120839800 + AluSc SINE Alu 1 291 -18 240 230 30 40 chr5 78790867 78790967 -120839183 - L1ME4a LINE L1 -195 5926 5828 1855 150 0 27 chr5 78790997 78791297 -120838853 - AluJo SINE Alu -20 292 1 228 35 0 0 chr5 78791349 78791378 -120838772 + (T)n Simple_repeat Simple_repeat 1 29 0 26 0 0 0 chr5 78791560 78791586 -120838564 + AT_rich Low_complexity Low_complexity 1 26 0 2096 115 7 13 chr5 78791825 78792129 -120838021 - AluSx SINE Alu -7 305 4 998 196 214 0 chr5 78792231 78792451 -120837699 + Tigger7 DNA MER2_type 1 267 -466 624 135 0 0 chr5 78792484 78792573 -120837577 + Tigger7 DNA MER2_type 2499 2587 0 311 227 239 0 chr5 78792656 78792744 -120837406 - Tigger1 DNA MER2_type -1 2417 2309 1350 115 0 6 chr5 78794259 78794441 -120835709 + AluSq SINE Alu 101 281 -32 254 211 8 117 chr5 78795170 78795298 -120834852 - MIR SINE MIR -53 209 96 338 307 116 58 chr5 78799591 78799868 -120830282 + HAL1b LINE L1 105 397 -951 2290 131 0 0 chr5 78800373 78800685 -120829465 - AluSx SINE Alu 0 312 1 6255 50 6 1 chr5 78800939 78801756 -120828394 - L1PA7 LINE L1 -3 6151 5331 26 0 0 0 chr5 78802417 78802443 -120827707 + AT_rich Low_complexity Low_complexity 1 26 0 362 286 193 8 chr5 78802498 78802617 -120827533 + MER5A DNA MER1_type 47 187 -2 278 227 34 11 chr5 78802680 78802768 -120827382 + L1M4 LINE L1 3859 3948 -2198 389 299 184 13 chr5 78802779 78803083 -120827067 - L1 LINE L1 -1553 4593 4238 5455 200 106 75 chr5 78803200 78803454 -120826696 + L1MDa LINE L1 20 265 -6275 2302 119 11 8 chr5 78803454 78803808 -120826342 + THE1A LTR MaLR 1 355 0 5455 200 106 75 chr5 78803808 78803913 -120826237 + L1MDa LINE L1 265 365 -6175 297 0 0 0 chr5 78803913 78803946 -120826204 + (CA)n Simple_repeat Simple_repeat 1 33 0 5455 200 106 75 chr5 78803946 78805653 -120824497 + L1MDa LINE L1 365 2151 -4389 2915 170 17 26 chr5 78805659 78806234 -120823916 - THE1-int LTR MaLR -407 1173 604 405 119 0 0 chr5 78806238 78806297 -120823853 - MSTA LTR MaLR -369 59 1 1135 46 13 7 chr5 78806716 78806867 -120823283 - L1PA6 LINE L1 -4 6150 5999 279 291 63 28 chr5 78806935 78807155 -120822995 - L1MC/D LINE L1 -360 5761 5534 1941 159 10 3 chr5 78807413 78807715 -120822435 + AluJb SINE Alu 1 304 -8 380 209 18 18 chr5 78807720 78807830 -120822320 + L1MD1 LINE L1 6123 6232 -10 22 35 0 0 chr5 78808028 78808057 -120822093 + AT_rich Low_complexity Low_complexity 1 29 0 223 277 4 106 chr5 78809009 78809137 -120821013 + MIR SINE MIR 19 132 -129 852 155 0 34 chr5 78809566 78809714 -120820436 + FLAM_C SINE Alu 1 143 0 2081 101 0 11 chr5 78811528 78811814 -120818336 - AluSg SINE Alu -5 305 23 23 0 0 0 chr5 78811814 78811837 -120818313 + AT_rich Low_complexity Low_complexity 1 23 0 413 100 0 0 chr5 78812301 78812371 -120817779 - AluY SINE Alu -2 308 239 1578 86 5 0 chr5 78812371 78812569 -120817581 - AluY SINE Alu -112 199 1 1833 153 18 9 chr5 78814807 78815140 -120815010 - MER7A DNA MER2_type 0 346 13 1025 280 122 31 chr5 78815265 78815940 -120814210 - MER20B DNA MER1_type -36 747 12 250 254 15 0 chr5 78817663 78817730 -120812420 + MIR SINE MIR 75 142 -120 * 444 254 135 0 chr5 78817728 78817854 -120812296 - MIR SINE MIR -44 218 76 438 240 24 8 chr5 78819538 78819663 -120810487 - MER112 DNA MER1_type 0 260 134 1039 200 0 11 chr5 78819731 78819921 -120810229 - AluJo SINE Alu -124 188 1 4417 132 41 26 chr5 78819922 78820491 -120809659 - Tigger1 DNA MER2_type -1602 816 230 2234 106 0 0 chr5 78820491 78820784 -120809366 + AluSg SINE Alu 1 293 -17 4417 132 41 26 chr5 78820784 78821018 -120809132 - Tigger1 DNA MER2_type -2188 230 1 807 228 135 59 chr5 78821354 78821591 -120808559 - MIR SINE MIR -1 261 7 1719 183 0 17 chr5 78822836 78823136 -120807014 - AluJb SINE Alu -17 295 1 1840 154 13 13 chr5 78823961 78824266 -120805884 - AluJo SINE Alu -3 309 5 39 38 0 0 chr5 78824463 78824516 -120805634 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr5 78824615 78824636 -120805514 + AT_rich Low_complexity Low_complexity 1 21 0 1580 103 5 0 chr5 78825943 78826147 -120804003 - AluSq SINE Alu -45 268 64 2259 78 3 20 chr5 78826317 78826623 -120803527 + AluY SINE Alu 1 301 -10 211 235 15 44 chr5 78826711 78826779 -120803371 + GA-rich Low_complexity Low_complexity 4 69 0 2096 132 7 0 chr5 78827072 78827367 -120802783 + AluSx SINE Alu 3 299 -13 2187 91 7 14 chr5 78827502 78827798 -120802352 + AluSx SINE Alu 13 306 -6 391 340 63 29 chr5 78828513 78828719 -120801431 + L1ME4a LINE L1 5656 5868 -253 1993 33 41 0 chr5 78828910 78829153 -120800997 + L1PA3 LINE L1 5900 6152 -3 25 0 0 0 chr5 78829153 78829178 -120800972 + AT_rich Low_complexity Low_complexity 1 25 0 1293 219 8 0 chr5 78831213 78831450 -120798700 - MER8 DNA MER2_type 0 239 1 1225 179 0 5 chr5 78831969 78832165 -120797985 + AluJb SINE Alu 85 279 -33 414 0 0 0 chr5 78832165 78832211 -120797939 + (CA)n Simple_repeat Simple_repeat 1 46 0 1848 159 3 13 chr5 78833743 78834045 -120796105 + AluJo SINE Alu 11 309 -3 21 0 0 0 chr5 78834504 78834525 -120795625 + AT_rich Low_complexity Low_complexity 1 21 0 226 259 19 0 chr5 78834697 78834751 -120795399 + MER5A DNA MER1_type 128 182 -7 667 250 103 54 chr5 78835834 78836202 -120793948 + MER113 DNA MER1_type? 30 415 -106 2011 214 34 23 chr5 78836202 78836627 -120793523 + L1M4 LINE L1 4760 5179 -967 1290 204 108 14 chr5 78836627 78836906 -120793244 + AluSg SINE Alu 1 305 -5 1982 134 55 3 chr5 78836912 78837204 -120792946 + AluSx SINE Alu 3 309 -3 2011 214 34 23 chr5 78837204 78837335 -120792815 + L1M4 LINE L1 5183 5329 -817 2983 178 89 64 chr5 78837336 78838276 -120791874 + L1MB3 LINE L1 5167 6126 -57 27 29 0 0 chr5 78838535 78838569 -120791581 + AT_rich Low_complexity Low_complexity 1 34 0 186 71 0 0 chr5 78839351 78839379 -120790771 + (TTGG)n Simple_repeat Simple_repeat 2 29 0 293 280 30 68 chr5 78841051 78841183 -120788967 - L2 LINE L2 0 3272 3146 876 170 76 31 chr5 78841859 78842083 -120788067 - L1MB5 LINE L1 0 6174 5941 2386 189 87 72 chr5 78842086 78842420 -120787730 - L1MB5 LINE L1 -718 5456 5128 267 54 0 0 chr5 78842420 78842457 -120787693 + (TTG)n Simple_repeat Simple_repeat 2 38 0 2386 189 87 72 chr5 78842457 78842605 -120787545 - L1MB5 LINE L1 -1046 5128 4984 2293 93 0 0 chr5 78842605 78842896 -120787254 - AluY SINE Alu -20 291 1 2386 189 87 72 chr5 78842896 78843240 -120786910 - L1MB5 LINE L1 -1190 4984 4615 3292 93 39 8 chr5 78843608 78844094 -120786056 + MER1A DNA MER1_type 28 528 -1 204 229 21 0 chr5 78844558 78844606 -120785544 - MIR SINE MIR -1 261 213 907 191 45 10 chr5 78844618 78844817 -120785333 + MER46A DNA MER2_type 31 236 0 608 219 55 60 chr5 78844864 78845065 -120785085 - MIR SINE MIR -59 203 4 234 0 0 0 chr5 78845318 78845344 -120784806 + (A)n Simple_repeat Simple_repeat 1 26 0 212 310 138 11 chr5 78845395 78845482 -120784668 + MIR SINE MIR 51 148 -60 301 292 88 109 chr5 78846233 78846507 -120783643 + L3 LINE CR1 1044 1311 -266 200 217 58 29 chr5 78846507 78846576 -120783574 + MIR3 SINE MIR 111 181 -27 1493 152 66 0 chr5 78846675 78846977 -120783173 - MER33 DNA MER1_type -2 322 1 452 283 128 53 chr5 78846991 78847217 -120782933 - MIR SINE MIR -19 243 1 2022 152 0 0 chr5 78848202 78848222 -120781928 - AluSx SINE Alu -9 303 284 183 114 0 0 chr5 78848222 78848257 -120781893 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 2022 152 0 0 chr5 78848257 78848539 -120781611 - AluSx SINE Alu -27 285 1 38 0 0 20 chr5 78850215 78850238 -120779912 + AT_rich Low_complexity Low_complexity 1 23 -25 819 167 0 8 chr5 78850238 78850358 -120779792 + FLAM_C SINE Alu 1 119 -14 38 0 0 20 chr5 78850358 78850383 -120779767 + AT_rich Low_complexity Low_complexity 23 48 0 704 213 148 19 chr5 78850522 78850738 -120779412 + MIR SINE MIR 13 256 -6 192 77 0 0 chr5 78850943 78850969 -120779181 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 252 282 13 39 chr5 78851777 78851855 -120778295 - L2 LINE L2 -1 3271 3196 2045 81 15 0 chr5 78851923 78852184 -120777966 - AluSg SINE Alu -7 303 39 1949 127 28 0 chr5 78853445 78853728 -120776422 + AluSx SINE Alu 1 291 -21 3416 156 54 19 chr5 78854941 78855588 -120774562 - L1MA7 LINE L1 0 6291 5622 618 68 0 0 chr5 78855682 78855770 -120774380 + (TC)n Simple_repeat Simple_repeat 1 88 0 246 95 0 0 chr5 78855811 78855853 -120774297 + (TC)n Simple_repeat Simple_repeat 2 43 0 225 22 0 67 chr5 78855888 78855933 -120774217 + (TC)n Simple_repeat Simple_repeat 1 42 0 3132 154 53 20 chr5 78856057 78856643 -120773507 - L1MA7 LINE L1 -70 6221 5617 658 153 0 24 chr5 78856731 78856901 -120773249 + CT-rich Low_complexity Low_complexity 1 166 0 676 156 0 23 chr5 78856927 78857100 -120773050 + CT-rich Low_complexity Low_complexity 2 170 0 340 213 19 28 chr5 78857100 78857208 -120772942 + (CATATA)n Simple_repeat Simple_repeat 2 108 0 301 316 75 15 chr5 78857310 78857443 -120772707 + MIR SINE MIR 25 165 -97 1471 129 24 0 chr5 78857443 78857653 -120772497 + AluSg/x SINE Alu 84 298 -14 235 279 0 0 chr5 78857777 78857838 -120772312 + MIR SINE MIR 189 249 -13 1877 82 98 0 chr5 78858989 78859244 -120770906 - AluSg SINE Alu -30 280 1 343 131 0 9 chr5 78860165 78860223 -120769927 - Alu SINE Alu -18 284 237 2034 141 0 0 chr5 78860305 78860589 -120769561 - AluJb SINE Alu -28 284 1 765 222 99 0 chr5 78861713 78861875 -120768275 - MER45A DNA AcHobo 0 178 1 371 269 51 53 chr5 78862409 78862615 -120767535 - MIR SINE MIR -56 206 5 303 174 43 14 chr5 78863359 78863428 -120766722 - Charlie7 DNA MER1_type -2507 105 35 2065 143 0 13 chr5 78863466 78863781 -120766369 - AluSx SINE Alu -1 311 1 608 189 7 72 chr5 78863947 78864100 -120766050 + MER5A DNA MER1_type 43 185 -4 747 147 9 0 chr5 78864110 78864219 -120765931 + FLAM_A SINE Alu 1 110 -32 303 211 174 127 chr5 78865531 78865744 -120764406 - MLT1J LTR MaLR -251 260 38 187 247 136 62 chr5 78867306 78867387 -120762763 + L2 LINE L2 3158 3244 -28 624 54 0 0 chr5 78868530 78868604 -120761546 + AluSp SINE Alu 2 75 -238 3420 106 58 4 chr5 78868606 78869089 -120761061 + MER9 LTR ERVK 3 511 0 1795 73 4 13 chr5 78869089 78869323 -120760827 + AluSp SINE Alu 70 301 -12 2559 43 0 3 chr5 78869592 78869894 -120760256 + AluY SINE Alu 1 301 -10 2254 124 0 6 chr5 78870272 78870586 -120759564 - AluSx SINE Alu 0 312 1 2307 108 0 3 chr5 78870826 78871140 -120759010 + AluSq SINE Alu 1 313 0 672 77 0 0 chr5 78871158 78871249 -120758901 + (GGAA)n Simple_repeat Simple_repeat 4 94 0 349 268 159 13 chr5 78871360 78871517 -120758633 + MER104 DNA Tc2 1 180 0 1000 126 0 18 chr5 78872116 78872364 -120757786 + AluJb SINE Alu 2 296 -16 204 40 0 0 chr5 78873080 78873105 -120757045 + (CGGGG)n Simple_repeat Simple_repeat 4 28 0 22 70 0 0 chr5 78873216 78873259 -120756891 + GC_rich Low_complexity Low_complexity 1 43 0 244 226 44 145 chr5 78875181 78875340 -120754810 - MIR SINE MIR -20 242 100 627 231 0 71 chr5 78875348 78875517 -120754633 + MER97c DNA MER1_type? 15 171 -919 413 289 86 43 chr5 78876263 78876442 -120753708 - MIR SINE MIR 0 262 69 2090 137 3 0 chr5 78876442 78876734 -120753416 + AluSx SINE Alu 1 293 -19 413 289 86 43 chr5 78876734 78876786 -120753364 - MIR SINE MIR -193 69 21 180 0 0 0 chr5 78877216 78877236 -120752914 + (TCTA)n Simple_repeat Simple_repeat 4 23 0 1385 147 77 37 chr5 78877304 78877577 -120752573 + AluJo SINE Alu 3 286 -26 46 33 0 0 chr5 78877577 78877637 -120752513 + AT_rich Low_complexity Low_complexity 1 60 0 1462 166 50 25 chr5 78877637 78877915 -120752235 - L1MB5 LINE L1 -4 6170 5886 1769 170 3 0 chr5 78877953 78878241 -120751909 - AluJb SINE Alu -23 289 1 358 215 13 13 chr5 78878890 78878969 -120751181 + MER112 DNA MER1_type 74 152 -108 303 296 106 7 chr5 78878964 78879106 -120751044 + MER112 DNA MER1_type 99 254 -6 * 2287 101 7 0 chr5 78879805 78880102 -120750048 + AluSx SINE Alu 1 299 -13 868 251 78 17 chr5 78880469 78880700 -120749450 + MIR SINE MIR 3 247 -15 1078 202 58 93 chr5 78880879 78881193 -120748957 - L1MC5 LINE L1 -7 7954 7668 1729 164 0 14 chr5 78881193 78881505 -120748645 - AluJo SINE Alu 0 308 1 1078 202 58 93 chr5 78881505 78881789 -120748361 - L1MC5 LINE L1 -293 7668 7376 812 213 119 55 chr5 78881769 78882022 -120748128 - L1MC4 LINE L1 -985 7057 6789 * 2022 123 3 36 chr5 78883242 78883384 -120746766 + AluSx SINE Alu 1 129 -183 2322 73 0 20 chr5 78883384 78883686 -120746464 + AluY SINE Alu 1 296 -15 2022 123 3 36 chr5 78883686 78883844 -120746306 + AluSx SINE Alu 129 291 -21 26 0 0 0 chr5 78883913 78883939 -120746211 + AT_rich Low_complexity Low_complexity 1 26 0 207 319 139 0 chr5 78884514 78884586 -120745564 - L2 LINE L2 -28 3244 3163 530 209 91 57 chr5 78884811 78885021 -120745129 - L1ME LINE L1 -5189 881 665 901 218 0 0 chr5 78885021 78885186 -120744964 - AluJb SINE Alu -11 301 137 6217 136 14 17 chr5 78885193 78885820 -120744330 - L1MA8 LINE L1 0 6291 5664 2454 88 0 0 chr5 78885820 78886125 -120744025 - AluSx SINE Alu -7 305 1 6217 136 14 17 chr5 78886125 78886830 -120743320 - L1MA8 LINE L1 -627 5664 4960 1925 135 22 39 chr5 78886881 78887229 -120742921 + THE1B LTR MaLR 1 434 -23 1462 246 6 12 chr5 78887229 78887566 -120742584 - L1ME LINE L1 -5498 572 238 2161 171 34 101 chr5 78887596 78888158 -120741992 - MER21B LTR ERV1 -1 862 339 1191 110 0 0 chr5 78888470 78888633 -120741517 + AluSg/x SINE Alu 145 307 -5 2278 107 0 25 chr5 78888644 78888962 -120741188 - AluSg SINE Alu 0 310 1 27 0 0 0 chr5 78889418 78889445 -120740705 + AT_rich Low_complexity Low_complexity 1 27 0 201 235 0 39 chr5 78890903 78890954 -120739196 + (CATATA)n Simple_repeat Simple_repeat 6 54 0 227 222 86 37 chr5 78891740 78891821 -120738329 - L2 LINE L2 -27 3286 3202 2510 61 3 6 chr5 78892326 78892638 -120737512 + AluY SINE Alu 1 311 0 628 188 56 25 chr5 78892943 78893103 -120737047 - LTR33 LTR ERVL -31 490 326 274 235 273 15 chr5 78893113 78893245 -120736905 - LTR33 LTR ERVL -343 178 13 22 35 0 0 chr5 78893561 78893590 -120736560 + AT_rich Low_complexity Low_complexity 1 29 0 1709 166 7 14 chr5 78893773 78894068 -120736082 + AluJb SINE Alu 3 295 -17 1932 184 54 0 chr5 78894528 78894915 -120735235 + Charlie1b DNA MER1_type 32 439 -84 1937 145 0 10 chr5 78894921 78895225 -120734925 + AluSg SINE Alu 1 301 -9 499 241 111 55 chr5 78895227 78895426 -120734724 + MER63A DNA MER1_type 1 210 0 * 518 147 29 29 chr5 78895426 78895519 -120734631 + Charlie1b DNA MER1_type 431 523 0 1954 156 0 0 chr5 78895702 78895997 -120734153 + AluJb SINE Alu 3 297 -15 2234 90 23 7 chr5 78896394 78896695 -120733455 + AluSq SINE Alu 1 306 -7 2273 110 3 0 chr5 78897115 78897425 -120732725 + AluSx SINE Alu 1 311 -1 535 188 208 47 chr5 78897447 78897586 -120732564 + MER5B DNA MER1_type 6 172 -6 2571 101 23 103 chr5 78897586 78897756 -120732394 + LTR23 LTR ERV1 1 183 -254 1817 134 17 27 chr5 78897756 78898048 -120732102 + AluSx SINE Alu 6 294 -18 2571 101 23 103 chr5 78898048 78898352 -120731798 + LTR23 LTR ERV1 183 437 0 4880 91 6 11 chr5 78898381 78899022 -120731128 + L1PA15 LINE L1 5526 6163 -2 1497 149 12 33 chr5 78899038 78899280 -120730870 + AluJo SINE Alu 1 237 -75 240 304 108 0 chr5 78899316 78899418 -120730732 - MER5A DNA MER1_type -76 113 1 366 247 162 52 chr5 78900329 78900637 -120729513 + L1ME1 LINE L1 5567 5908 -213 982 72 145 0 chr5 78901055 78901193 -120728957 + AluSg/x SINE Alu 153 310 0 330 296 105 23 chr5 78901732 78901904 -120728246 - MER5A DNA MER1_type 0 189 4 2228 106 0 0 chr5 78902402 78902695 -120727455 - AluSx SINE Alu -15 297 5 958 267 27 38 chr5 78902761 78903210 -120726940 - MLT1H LTR MaLR -4 545 22 2061 128 0 7 chr5 78903344 78903633 -120726517 - AluSx SINE Alu -25 287 1 722 167 7 80 chr5 78903757 78903907 -120726243 + FLAM_C SINE Alu 5 143 0 751 174 159 10 chr5 78904584 78904779 -120725371 + MSTB2 LTR MaLR 13 236 -221 2353 152 12 22 chr5 78904779 78905181 -120724969 + MER57A LTR ERV1 1 398 -5 1695 128 56 46 chr5 78905205 78905510 -120724640 + AluSx SINE Alu 1 308 -4 1116 157 13 65 chr5 78905510 78905740 -120724410 + MSTB2 LTR MaLR 240 457 0 2282 125 0 0 chr5 78906022 78906334 -120723816 - AluSx SINE Alu 0 312 1 353 211 79 26 chr5 78906335 78906449 -120723701 + L1ME1 LINE L1 6043 6162 -4 3913 181 36 22 chr5 78906463 78906572 -120723578 + L1MB3 LINE L1 5386 5492 -691 2510 72 0 0 chr5 78906572 78906877 -120723273 + AluY SINE Alu 2 306 -5 3913 181 36 22 chr5 78906877 78907553 -120722597 + L1MB3 LINE L1 5492 6182 -1 314 121 0 17 chr5 78907589 78907647 -120722503 + (GGAA)n Simple_repeat Simple_repeat 3 59 0 187 303 35 42 chr5 78908775 78908917 -120721233 + MER5A DNA MER1_type 44 184 -5 1661 169 11 7 chr5 78909423 78909701 -120720449 + AluSx SINE Alu 18 296 -16 448 254 124 62 chr5 78909955 78910083 -120720067 + L1ME LINE L1 4779 4898 -1223 2204 116 0 3 chr5 78910083 78910386 -120719764 + AluSq SINE Alu 1 302 -11 448 254 124 62 chr5 78910386 78911088 -120719062 + L1ME LINE L1 4898 5669 -452 340 241 222 6 chr5 78911139 78911301 -120718849 + L1MC/D LINE L1 5628 5824 -1984 235 253 12 24 chr5 78911367 78911450 -120718700 + (CATATA)n Simple_repeat Simple_repeat 4 85 0 890 262 99 68 chr5 78911893 78912366 -120717784 + LTR16C LTR ERVL 1 488 -3 1326 90 32 21 chr5 78912366 78912555 -120717595 + MER30 DNA MER1_type 5 195 -35 2467 158 62 51 chr5 78913175 78913867 -120716283 - MER51A LTR ERV1 -9 625 1 1711 148 0 40 chr5 78913983 78914280 -120715870 + AluJb SINE Alu 1 285 -27 384 231 40 0 chr5 78914280 78914453 -120715697 + (TA)n Simple_repeat Simple_repeat 1 180 0 37 0 0 0 chr5 78914453 78914490 -120715660 + AT_rich Low_complexity Low_complexity 1 37 0 1111 90 0 0 chr5 78914490 78914623 -120715527 + AluSg SINE Alu 1 133 -177 2426 90 0 0 chr5 78914623 78914923 -120715227 + AluSx SINE Alu 1 300 -12 773 170 5 87 chr5 78914926 78915004 -120715146 + MER96B DNA MER1_type? 188 271 -146 2250 82 0 39 chr5 78915004 78915309 -120714841 - AluSg SINE Alu -17 293 1 773 170 5 87 chr5 78915309 78915436 -120714714 + MER96B DNA MER1_type? 271 376 -41 227 338 82 26 chr5 78915466 78915697 -120714453 - L2 LINE L2 -1083 2231 1988 2200 110 0 0 chr5 78916307 78916618 -120713532 - AluSx SINE Alu 0 311 1 226 127 16 16 chr5 78916628 78916691 -120713459 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 2385 45 7 7 chr5 78916999 78917291 -120712859 + AluY SINE Alu 19 310 -1 2207 112 10 7 chr5 78917582 78917877 -120712273 + AluSx SINE Alu 1 296 -16 492 327 34 10 chr5 78918088 78918293 -120711857 + MIR SINE MIR 53 262 0 2166 93 60 63 chr5 78918305 78918472 -120711678 + THE1B LTR MaLR 1 167 -197 2241 107 0 10 chr5 78918472 78918781 -120711369 + AluSx SINE Alu 2 307 -5 2166 93 60 63 chr5 78918781 78918978 -120711172 + THE1B LTR MaLR 167 364 0 1682 154 22 47 chr5 78919022 78919340 -120710810 + AluJb SINE Alu 1 310 -2 2171 116 0 10 chr5 78919346 78919648 -120710502 + AluSx SINE Alu 5 303 -9 504 251 100 84 chr5 78919672 78920031 -120710119 + MLT1L LTR MaLR 1 365 -250 1856 174 7 0 chr5 78920738 78921036 -120709114 + AluJb SINE Alu 1 300 -12 206 156 22 0 chr5 78921106 78921151 -120708999 + GA-rich Low_complexity Low_complexity 2 47 0 21 36 0 0 chr5 78921234 78921262 -120708888 + AT_rich Low_complexity Low_complexity 1 28 0 4451 146 16 31 chr5 78921307 78921782 -120708368 - L1 LINE L1 -1901 4245 3785 618 145 0 124 chr5 78921782 78921927 -120708223 - FLAM_A SINE Alu -6 127 1 4451 146 16 31 chr5 78921927 78922253 -120707897 - L1 LINE L1 -2361 3785 3456 2102 115 3 3 chr5 78922930 78923216 -120706934 + AluSq SINE Alu 1 286 -27 2315 81 3 19 chr5 78923485 78923795 -120706355 + AluSp SINE Alu 1 305 -8 276 102 0 0 chr5 78923810 78923859 -120706291 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 318 297 25 8 chr5 78924105 78924223 -120705927 - MER112 DNA MER1_type -4 256 137 1050 98 0 0 chr5 78924291 78924424 -120705726 + AluSq/x SINE Alu 1 133 -179 907 98 81 0 chr5 78924705 78924828 -120705322 - AluSg/x SINE Alu -11 299 167 945 142 0 0 chr5 78924835 78924969 -120705181 - AluSg/x SINE Alu -8 302 169 5058 204 28 5 chr5 78925064 78926176 -120703974 + L1PA16 LINE L1 4137 5273 -873 1115 127 19 0 chr5 78926178 78926335 -120703815 + FRAM SINE Alu 1 159 -17 341 55 182 0 chr5 78926338 78926393 -120703757 + L1P LINE L1 5265 5329 -837 1195 110 0 0 chr5 78926393 78926547 -120703603 + AluSp SINE Alu 140 293 -20 1913 124 3 60 chr5 78926557 78926872 -120703278 + AluSx SINE Alu 1 297 -15 2339 80 3 10 chr5 78926872 78927172 -120702978 + AluY SINE Alu 1 298 -13 5013 106 10 89 chr5 78927172 78927342 -120702808 + L1PA16 LINE L1 5322 5504 -662 2257 106 10 3 chr5 78927342 78927645 -120702505 + AluSp SINE Alu 1 305 -8 5013 106 10 89 chr5 78927645 78928246 -120701904 + L1PA16 LINE L1 5504 6012 -154 2059 111 4 0 chr5 78928246 78928559 -120701591 + AluSx SINE Alu 1 314 0 5013 106 10 89 chr5 78928559 78928703 -120701447 + L1PA16 LINE L1 6012 6166 0 439 269 36 18 chr5 78929497 78929664 -120700486 + HAL1 LINE L1 1550 1719 -788 1669 138 73 7 chr5 78929777 78930052 -120700098 + AluJb SINE Alu 1 293 -19 2276 105 10 0 chr5 78930054 78930360 -120699790 + AluSg SINE Alu 1 309 -1 2520 68 0 34 chr5 78930381 78930705 -120699445 + AluSq SINE Alu 1 313 0 2381 88 3 0 chr5 78930879 78931185 -120698965 + AluSp SINE Alu 2 308 -5 2798 29 3 0 chr5 78931196 78931506 -120698644 + AluY SINE Alu 1 311 0 1086 206 49 16 chr5 78932138 78932381 -120697769 + AluJo SINE Alu 40 290 -22 2262 110 10 0 chr5 78932390 78932691 -120697459 - AluSx SINE Alu -8 304 1 386 229 12 0 chr5 78932740 78932823 -120697327 + L1MC4 LINE L1 7807 7890 -152 311 307 145 23 chr5 78932828 78933076 -120697074 + L2 LINE L2 2758 2974 -339 1844 171 7 3 chr5 78933076 78933386 -120696764 - AluJo SINE Alu -1 311 1 311 307 145 23 chr5 78933386 78933609 -120696541 + L2 LINE L2 2974 3277 -36 2333 92 7 10 chr5 78934039 78934344 -120695806 + AluSx SINE Alu 1 304 -8 2147 142 0 0 chr5 78934548 78934859 -120695291 - AluY SINE Alu 0 311 1 2226 122 0 25 chr5 78935275 78935594 -120694556 + AluSx SINE Alu 1 311 -1 270 0 0 0 chr5 78935594 78935624 -120694526 + (TA)n Simple_repeat Simple_repeat 2 31 0 2070 124 10 0 chr5 78935724 78936015 -120694135 + AluSq SINE Alu 1 294 -19 682 45 11 0 chr5 78936359 78936498 -120693652 - AluY SINE Alu 0 333 194 243 250 54 0 chr5 78936874 78936930 -120693220 + L1ME3A LINE L1 5708 5766 -404 1826 190 0 0 chr5 78936931 78937231 -120692919 + AluJb SINE Alu 1 300 -12 1708 147 12 69 chr5 78937236 78937377 -120692773 + AluJo SINE Alu 1 148 -164 2241 114 0 0 chr5 78937377 78937674 -120692476 + AluSc SINE Alu 1 297 -12 1708 147 12 69 chr5 78937674 78937851 -120692299 + AluJo SINE Alu 148 301 -11 408 268 0 0 chr5 78937862 78937963 -120692187 + AluS SINE Alu 1 82 -220 3999 80 33 6 chr5 78937963 78938502 -120691648 + MER41A LTR ERV1 1 554 0 3437 155 116 10 chr5 78938502 78939138 -120691012 + MER41A-int LTR ERV1 1 606 -5340 258 32 0 0 chr5 78939139 78939170 -120690980 + (TC)n Simple_repeat Simple_repeat 1 31 0 280 79 0 0 chr5 78939177 78939215 -120690935 + MER41A-int LTR ERV1 1096 1133 -4813 2218 101 7 3 chr5 78939215 78939523 -120690627 + AluSx SINE Alu 3 311 -1 1730 142 18 11 chr5 78939524 78939805 -120690345 + MER51-int LTR ERV1 3275 3557 -4259 600 208 42 48 chr5 78939805 78939998 -120690152 + L1ME3A LINE L1 5764 5937 -233 1830 149 40 0 chr5 78940002 78940298 -120689852 + AluSx SINE Alu 1 308 -4 1824 165 0 4 chr5 78940332 78940611 -120689539 - AluJo SINE Alu -29 283 6 4692 147 52 58 chr5 78940656 78941232 -120688918 - MER4D LTR ERV1 0 903 334 695 125 0 0 chr5 78941232 78941336 -120688814 + U13 snRNA snRNA 1 104 0 4692 147 52 58 chr5 78941336 78941668 -120688482 - MER4D LTR ERV1 -569 334 1 616 214 37 75 chr5 78941668 78941815 -120688335 + L1ME3A LINE L1 5980 6120 -50 1952 166 0 0 chr5 78941815 78942111 -120688039 - AluSx SINE Alu -16 296 1 616 214 37 75 chr5 78942111 78942150 -120688000 + L1ME3A LINE L1 6120 6159 -11 25 51 0 0 chr5 78942156 78942195 -120687955 + AT_rich Low_complexity Low_complexity 1 39 0 206 231 0 0 chr5 78942271 78942310 -120687840 + (CA)n Simple_repeat Simple_repeat 2 40 0 2494 73 0 0 chr5 78942357 78942660 -120687490 + AluY SINE Alu 1 303 -8 2246 107 3 0 chr5 78943135 78943425 -120686725 - AluSx SINE Alu -21 291 1 205 222 178 33 chr5 78943425 78943515 -120686635 - MER5A DNA MER1_type -37 152 50 2765 48 0 0 chr5 78943550 78943861 -120686289 + AluSq SINE Alu 1 311 -2 2551 64 0 0 chr5 78943861 78944158 -120685992 + AluY SINE Alu 1 297 -14 1080 195 55 49 chr5 78944177 78944562 -120685588 + MLT2B1 LTR ERVL 12 478 -42 549 247 37 49 chr5 78944613 78944775 -120685375 + L1ME LINE L1 391 550 -5520 1836 175 0 0 chr5 78944785 78945071 -120685079 + AluJb SINE Alu 1 286 -26 2180 116 3 0 chr5 78945082 78945376 -120684774 + AluSp SINE Alu 1 295 -18 27 0 0 0 chr5 78945380 78945407 -120684743 + AT_rich Low_complexity Low_complexity 1 27 0 280 345 11 0 chr5 78945678 78945765 -120684385 - LTR67 LTR ERVL -367 190 103 534 78 13 0 chr5 78945906 78945983 -120684167 - Alu SINE Alu -11 300 223 2459 67 0 7 chr5 78945984 78946283 -120683867 - AluY SINE Alu -14 297 1 267 143 0 0 chr5 78946283 78946325 -120683825 - AluSx SINE Alu -14 287 246 2098 104 83 8 chr5 78946325 78946700 -120683450 - LTR7 LTR ERV1 0 450 1 1493 142 4 4 chr5 78946702 78946928 -120683222 - AluSx SINE Alu -63 249 24 1642 227 98 30 chr5 78947052 78947524 -120682626 + MLT1D LTR MaLR 1 504 -1 470 191 82 9 chr5 78948863 78948973 -120681177 - L2 LINE L2 0 3313 3196 230 224 184 0 chr5 78948996 78949072 -120681078 - L2 LINE L2 -978 2336 2247 212 329 0 0 chr5 78949270 78949352 -120680798 + CT-rich Low_complexity Low_complexity 3 84 0 4319 58 7 35 chr5 78949547 78949731 -120680419 - MER41A LTR ERV1 0 554 366 2292 96 0 29 chr5 78949731 78950044 -120680106 - AluSq SINE Alu 0 313 10 4319 58 7 35 chr5 78950044 78950240 -120679910 - MER41A LTR ERV1 -188 366 193 2413 93 3 0 chr5 78950240 78950551 -120679599 - AluSp SINE Alu -1 312 1 4319 58 7 35 chr5 78950551 78950739 -120679411 - MER41A LTR ERV1 -361 193 1 2278 103 0 0 chr5 78950904 78951199 -120678951 - AluY SINE Alu -9 302 11 1723 152 90 4 chr5 78951232 78951509 -120678641 - AluJb SINE Alu -11 301 1 314 154 0 15 chr5 78951607 78951672 -120678478 + CT-rich Low_complexity Low_complexity 1 64 0 1857 120 18 0 chr5 78951672 78951946 -120678204 - AluSx SINE Alu -33 279 1 258 240 106 0 chr5 78951948 78952052 -120678098 - L1ME4a LINE L1 0 6121 6007 381 251 79 63 chr5 78952094 78952406 -120677744 - MLT1H LTR MaLR -16 551 147 1500 146 4 39 chr5 78952408 78952503 -120677647 + AluJo SINE Alu 31 128 -184 2141 102 14 0 chr5 78952503 78952797 -120677353 - AluSp SINE Alu -14 299 2 1500 146 4 39 chr5 78952797 78952961 -120677189 + AluJo SINE Alu 128 281 -31 1964 117 0 25 chr5 78952963 78953279 -120676871 - AluSg SINE Alu -2 308 1 264 212 282 12 chr5 78953328 78953413 -120676737 - MER5A DNA MER1_type -6 183 76 365 257 18 45 chr5 78953421 78953554 -120676596 - MIR SINE MIR -79 129 4 834 165 0 0 chr5 78953741 78953874 -120676276 - FLAM_C SINE Alu 0 133 1 2243 83 3 13 chr5 78954018 78954320 -120675830 + AluSq SINE Alu 1 299 -14 470 240 112 16 chr5 78954356 78954481 -120675669 - MIR SINE MIR -69 193 57 2050 94 26 19 chr5 78954735 78955044 -120675106 + AluSq SINE Alu 1 311 -2 2468 47 0 0 chr5 78955112 78955412 -120674738 - AluY SINE Alu -11 300 1 1623 163 3 26 chr5 78955500 78955807 -120674343 + AluJo SINE Alu 1 300 -12 21 57 0 0 chr5 78955960 78955995 -120674155 + AT_rich Low_complexity Low_complexity 1 35 0 410 174 0 157 chr5 78956000 78956115 -120674035 - AluSq/x SINE Alu -185 117 21 271 217 93 29 chr5 78956125 78956246 -120673904 - MIR SINE MIR -47 215 7 2396 52 0 16 chr5 78956355 78956661 -120673489 + AluY SINE Alu 1 301 -10 441 238 38 38 chr5 78956946 78957051 -120673099 - L2 LINE L2 0 3272 3168 2288 91 0 3 chr5 78957489 78957797 -120672353 - AluSq SINE Alu -6 307 1 381 310 39 60 chr5 78957904 78958136 -120672014 - L2 LINE L2 -8 3305 3079 758 139 0 25 chr5 78958175 78958297 -120671853 + FLAM_C SINE Alu 22 140 -3 1968 270 210 17 chr5 78958306 78959379 -120670771 - L2 LINE L2 -262 3051 1750 969 74 0 67 chr5 78959379 78959528 -120670622 + AluSg SINE Alu 1 139 -171 2097 103 3 0 chr5 78959640 78959931 -120670219 + AluSg SINE Alu 1 292 -18 840 162 7 15 chr5 78959941 78960077 -120670073 + AluJo SINE Alu 2 136 -176 1730 153 0 81 chr5 78960077 78960411 -120669739 + AluJo SINE Alu 1 307 -5 625 306 78 19 chr5 78960429 78960697 -120669453 - L2 LINE L2 -1618 1696 1413 316 209 12 58 chr5 78960738 78960824 -120669326 + HsTC2 DNA Tc2 6 87 -1811 2294 76 0 0 chr5 78960824 78961142 -120669008 + AluY SINE Alu 1 318 0 331 287 96 22 chr5 78961868 78962004 -120668146 - L2 LINE L2 0 3313 3168 1988 98 3 19 chr5 78962017 78962324 -120667826 - AluSp SINE Alu -11 302 1 880 212 42 62 chr5 78962338 78962431 -120667719 - MIR SINE MIR -2 260 167 2253 112 0 0 chr5 78962431 78962736 -120667414 + AluSx SINE Alu 2 306 -6 880 212 42 62 chr5 78962736 78962901 -120667249 - MIR SINE MIR -95 167 7 2641 156 129 2 chr5 78962969 78963464 -120666686 - LTR64 LTR ERVK 0 558 1 2593 39 0 3 chr5 78963862 78964174 -120665976 + AluY SINE Alu 1 311 0 392 169 101 79 chr5 78964225 78964314 -120665836 + FRAM SINE Alu 43 117 -49 450 257 105 35 chr5 78965750 78965820 -120664330 - MIR SINE MIR -66 196 132 2121 114 0 16 chr5 78965820 78966137 -120664013 + AluSx SINE Alu 1 312 0 450 257 105 35 chr5 78966137 78966237 -120663913 - MIR SINE MIR -130 132 14 1914 99 96 0 chr5 78966710 78966992 -120663158 + AluSx SINE Alu 1 309 -3 22 35 0 0 chr5 78967117 78967146 -120663004 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 78967246 78967274 -120662876 + AT_rich Low_complexity Low_complexity 1 28 0 1833 159 3 0 chr5 78967548 78967849 -120662301 - AluSg SINE Alu -8 302 1 1709 125 135 7 chr5 78967944 78968248 -120661902 - MER61A LTR ERV1 0 343 1 5312 80 20 59 chr5 78968662 78969563 -120660587 + SVA Other Other 1 866 -520 1150 76 0 38 chr5 78969576 78969787 -120660363 + SVA Other Other 664 866 -520 6253 65 13 44 chr5 78969804 78970777 -120659373 + SVA Other Other 433 1375 -11 24 0 0 0 chr5 78970777 78970801 -120659349 + AT_rich Low_complexity Low_complexity 1 24 0 2024 99 3 14 chr5 78970806 78971099 -120659051 + AluSg SINE Alu 3 292 -18 1945 117 19 31 chr5 78971649 78971966 -120658184 - AluSq SINE Alu 0 313 1 2046 104 28 0 chr5 78971983 78972271 -120657879 - AluSx SINE Alu -16 296 1 1543 189 29 0 chr5 78972283 78972564 -120657586 - AluJo SINE Alu -23 289 1 1941 236 36 45 chr5 78972564 78972876 -120657274 - L2 LINE L2 -854 2460 2154 1953 141 3 7 chr5 78972876 78973180 -120656970 + AluJb SINE Alu 2 304 -8 1941 236 36 45 chr5 78973180 78973470 -120656680 - L2 LINE L2 -1160 2154 1863 472 267 0 47 chr5 78974024 78974174 -120655976 - MIR SINE MIR -12 250 108 205 245 0 19 chr5 78974409 78974462 -120655688 - L2 LINE L2 -11 3302 3251 704 164 0 0 chr5 78974594 78974710 -120655440 + FLAM_C SINE Alu 3 118 -15 531 263 64 13 chr5 78974740 78974896 -120655254 - L3 LINE CR1 -193 1384 1221 2063 98 11 0 chr5 78974973 78975260 -120654890 + AluSg SINE Alu 2 291 -19 488 288 23 0 chr5 78975476 78975608 -120654542 + MIR SINE MIR 74 208 -54 198 315 176 0 chr5 78978391 78978499 -120651651 + L2 LINE L2 3145 3271 -1 1910 121 19 19 chr5 78978674 78978981 -120651169 - AluSx SINE Alu -1 311 5 231 246 192 43 chr5 78978990 78979324 -120650826 - L1ME4a LINE L1 0 6121 5725 2028 141 0 0 chr5 78979324 78979622 -120650528 - AluSx SINE Alu -14 298 1 231 246 192 43 chr5 78979622 78979657 -120650493 - L1ME4a LINE L1 -396 5725 5697 23 0 0 0 chr5 78980025 78980048 -120650102 + AT_rich Low_complexity Low_complexity 1 23 0 1014 84 8 0 chr5 78980054 78980185 -120649965 + AluY SINE Alu 1 132 -179 333 125 0 47 chr5 78980339 78980403 -120649747 + Alu SINE Alu 236 296 -6 1965 133 0 26 chr5 78980530 78980838 -120649312 - AluSx SINE Alu -12 300 1 2255 78 0 0 chr5 78980973 78981266 -120648884 - AluY SINE Alu -13 298 6 418 197 141 42 chr5 78981331 78981473 -120648677 - AluYa5 SINE Alu -20 291 136 1927 102 15 4 chr5 78981511 78981785 -120648365 - AluSg SINE Alu -31 279 3 527 306 31 14 chr5 78981790 78982012 -120648138 - L1MC/D LINE L1 -2042 5766 5541 1326 106 5 5 chr5 78982258 78982446 -120647704 - AluSc SINE Alu -121 188 1 287 233 87 47 chr5 78983123 78983273 -120646877 - L1MC5 LINE L1 -33 7928 7773 1842 171 60 47 chr5 78983323 78983659 -120646491 - L1MB7 LINE L1 -9 6175 5845 1681 116 32 0 chr5 78983659 78983909 -120646241 - AluSx SINE Alu -16 296 39 1842 171 60 47 chr5 78983909 78984008 -120646142 - L1MB7 LINE L1 -339 5845 5731 1372 184 60 3 chr5 78984008 78984291 -120645859 - AluJo SINE Alu -13 299 1 1842 171 60 47 chr5 78984291 78984305 -120645845 - L1MB7 LINE L1 -453 5731 5719 1126 45 0 0 chr5 78984340 78984472 -120645678 + AluY SINE Alu 1 132 -179 384 206 0 118 chr5 78984600 78984648 -120645502 - L1MB7 LINE L1 -571 5603 5551 221 0 35 0 chr5 78984648 78984677 -120645473 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 1893 132 4 0 chr5 78984680 78984960 -120645190 - AluSx SINE Alu -31 281 1 384 206 0 118 chr5 78984960 78985009 -120645141 - L1MB7 LINE L1 -625 5549 5514 820 170 56 145 chr5 78985013 78985169 -120644981 - L1MC5 LINE L1 -186 7775 7607 1560 180 16 29 chr5 78985169 78985485 -120644665 - AluJo SINE Alu 0 312 1 820 170 56 145 chr5 78985485 78985525 -120644625 - L1MC5 LINE L1 -354 7607 7565 2215 112 0 0 chr5 78985525 78985821 -120644329 + AluSx SINE Alu 1 296 -16 820 170 56 145 chr5 78985821 78985955 -120644195 - L1MC5 LINE L1 -396 7565 7498 740 179 0 8 chr5 78985955 78986089 -120644061 - FLAM_C SINE Alu 0 133 1 820 170 56 145 chr5 78986089 78986239 -120643911 - L1MC5 LINE L1 -463 7498 7336 577 248 71 19 chr5 78986361 78986571 -120643579 - MER112 DNA MER1_type -39 221 1 21 0 0 0 chr5 78986582 78986603 -120643547 + AT_rich Low_complexity Low_complexity 1 21 0 1217 224 108 64 chr5 78986672 78986965 -120643185 - MLT1D LTR MaLR -2 503 179 2162 109 0 0 chr5 78986965 78987267 -120642883 - AluSg SINE Alu -8 302 1 1217 224 108 64 chr5 78987267 78987455 -120642695 - MLT1D LTR MaLR -326 179 1 1988 116 27 0 chr5 78988227 78988519 -120641631 - AluSx SINE Alu -12 300 1 938 131 0 0 chr5 78988584 78988714 -120641436 + FLAM_C SINE Alu 2 131 -2 1443 167 73 0 chr5 78989014 78989289 -120640861 + AluJo SINE Alu 1 295 -17 259 316 105 23 chr5 78990857 78990990 -120639160 - MIR3 SINE MIR -10 198 55 1723 132 7 26 chr5 78991053 78991325 -120638825 + AluSx SINE Alu 1 267 -45 374 238 135 32 chr5 78991343 78991469 -120638681 + MER5A DNA MER1_type 51 189 0 29 70 0 0 chr5 78991943 78992000 -120638150 + AT_rich Low_complexity Low_complexity 1 57 0 2248 91 0 0 chr5 78992133 78992431 -120637719 + AluSq SINE Alu 1 298 -15 397 287 205 8 chr5 78992797 78993041 -120637109 - L1ME LINE L1 -406 5715 5424 331 238 71 0 chr5 78993188 78993272 -120636878 + MIR SINE MIR 115 204 -58 25 0 0 0 chr5 78993281 78993306 -120636844 + AT_rich Low_complexity Low_complexity 1 25 0 1505 180 6 30 chr5 78993562 78993890 -120636260 - 7SLRNA srpRNA srpRNA 0 320 1 825 156 0 15 chr5 78994063 78994198 -120635952 - FLAM_C SINE Alu 0 133 1 1944 86 0 21 chr5 78994405 78994685 -120635465 + AluY SINE Alu 37 310 -1 472 103 0 15 chr5 78994806 78994874 -120635276 - AluS SINE Alu -245 68 2 610 111 0 11 chr5 78995883 78995973 -120634177 + MER4A LTR ERV1 1 89 -575 301 51 26 0 chr5 78995979 78996018 -120634132 + MER4A LTR ERV1 261 300 -364 2123 79 0 79 chr5 78996018 78996348 -120633802 + AluSg SINE Alu 1 304 -6 1148 154 11 27 chr5 78996371 78996552 -120633598 + MER4A LTR ERV1 373 550 -114 1684 116 26 71 chr5 78996552 78996908 -120633242 - MER4A LTR ERV1 0 664 261 551 163 20 20 chr5 78996908 78997006 -120633144 - MER4A LTR ERV1 -566 98 1 * 927 74 0 16 chr5 78997006 78997126 -120633024 + MER4A LTR ERV1 547 664 0 601 179 0 60 chr5 78997439 78997573 -120632577 + FAM SINE Alu 1 48 -1 306 150 175 83 chr5 78997578 78997698 -120632452 + L1MC/D LINE L1 5350 5480 -879 2251 209 76 29 chr5 78997854 78998366 -120631784 - MLT1F LTR MaLR 0 542 7 1093 294 251 33 chr5 78998541 78998978 -120631172 - L2 LINE L2 0 3313 2973 2358 71 0 0 chr5 78998978 78999273 -120630877 + AluSg SINE Alu 1 295 -15 1093 294 251 33 chr5 78999273 78999591 -120630559 - L2 LINE L2 -340 2973 2726 1694 157 31 10 chr5 78999591 78999884 -120630266 + AluJb SINE Alu 1 299 -13 1093 294 251 33 chr5 78999884 78999901 -120630249 - L2 LINE L2 -587 2726 2714 3861 78 31 24 chr5 78999901 79000313 -120629837 - MER41A LTR ERV1 0 554 136 2182 87 7 7 chr5 79000313 79000612 -120629538 - AluSq SINE Alu -14 299 1 3861 78 31 24 chr5 79000612 79000749 -120629401 - MER41A LTR ERV1 -418 136 1 1093 294 251 33 chr5 79000749 79001189 -120628961 - L2 LINE L2 -599 2714 1718 1413 171 8 8 chr5 79001243 79001501 -120628649 + AluJo SINE Alu 50 307 -5 318 327 135 0 chr5 79001501 79001657 -120628493 - L1MC/D LINE L1 -2176 5632 5456 3880 64 0 62 chr5 79001741 79002286 -120627864 + MER9 LTR ERVK 1 511 0 2141 123 0 37 chr5 79002985 79003309 -120626841 - AluSx SINE Alu 0 312 1 2261 116 0 0 chr5 79003334 79003645 -120626505 - AluSx SINE Alu -1 311 1 1013 211 197 24 chr5 79003687 79004104 -120626046 - L1MC5 LINE L1 -76 7885 7397 216 0 0 0 chr5 79004482 79004506 -120625644 + (TTAA)n Simple_repeat Simple_repeat 2 25 0 1727 154 3 17 chr5 79004508 79004801 -120625349 - AluJo SINE Alu -23 289 1 1201 108 13 0 chr5 79004815 79004973 -120625177 - AluSg/x SINE Alu -15 295 136 402 256 169 20 chr5 79005238 79005433 -120624717 - LTR67 LTR ERVL 0 557 334 255 172 69 0 chr5 79006181 79006239 -120623911 - MLT1F1 LTR MaLR 0 567 506 1758 81 0 0 chr5 79006349 79006559 -120623591 - AluSq SINE Alu -103 210 1 221 361 139 16 chr5 79006780 79007024 -120623126 - L3b LINE CR1 -131 1452 1179 267 31 0 0 chr5 79007045 79007077 -120623073 + (TG)n Simple_repeat Simple_repeat 2 33 0 270 131 66 49 chr5 79007084 79007145 -120623005 - L1MC5 LINE L1 -44 7917 7856 259 208 104 13 chr5 79007316 79007393 -120622757 + MER51C LTR ERV1 346 429 -211 2050 98 0 11 chr5 79007439 79007715 -120622435 + AluSx SINE Alu 3 275 -37 303 211 33 67 chr5 79007744 79007834 -120622316 + MER51C LTR ERV1 429 515 -125 324 44 22 0 chr5 79007934 79007979 -120622171 + LTR9B LTR ERV1 32 77 -567 2533 71 0 3 chr5 79008003 79008311 -120621839 - AluY SINE Alu -4 307 1 284 108 0 0 chr5 79008313 79008350 -120621800 - Alu SINE Alu -265 38 2 888 88 88 0 chr5 79008350 79008475 -120621675 + LTR9B LTR ERV1 59 194 -450 * 3131 148 24 8 chr5 79008473 79008979 -120621171 + LTR9B LTR ERV1 131 644 0 380 105 0 0 chr5 79009661 79009718 -120620432 - Alu SINE Alu -4 296 240 328 194 28 0 chr5 79009819 79009891 -120620259 - L1 LINE L1 -844 6721 6648 * 7536 147 13 29 chr5 79009890 79010100 -120620050 - L1 LINE L1 -1298 6267 6055 2079 106 40 10 chr5 79010100 79010402 -120619748 + AluY SINE Alu 1 311 0 7536 147 13 29 chr5 79010402 79011083 -120619067 - L1 LINE L1 -1510 6055 5402 2147 93 6 51 chr5 79011083 79011395 -120618755 - AluSp SINE Alu -15 298 1 7536 147 13 29 chr5 79011395 79011854 -120618296 - L1 LINE L1 -2163 5402 4937 2039 120 36 26 chr5 79011854 79012163 -120617987 - AluSp SINE Alu -1 312 1 1036 139 0 0 chr5 79012165 79012338 -120617812 - L1 LINE L1 -3890 3675 3503 2232 109 10 0 chr5 79012555 79012857 -120617293 + AluSx SINE Alu 1 305 -7 2207 126 0 7 chr5 79012857 79013166 -120616984 + AluSc SINE Alu 1 308 -1 1421 183 95 52 chr5 79013235 79013655 -120616495 + LTR7 LTR ERV1 3 440 -10 3331 164 41 48 chr5 79013665 79014529 -120615621 + HERVH LTR ERV1 1 838 -6875 4160 207 44 61 chr5 79014642 79016359 -120613791 + HERVH LTR ERV1 458 2039 -4615 18002 145 63 18 chr5 79016459 79019534 -120610616 - L1M1 LINE L1 -4339 3226 15 927 105 32 0 chr5 79019667 79019791 -120610359 - AluSg SINE Alu -182 128 1 2452 140 23 44 chr5 79020237 79020307 -120609843 - MSTA LTR MaLR -1 427 357 2016 145 0 26 chr5 79020307 79020617 -120609533 + AluSx SINE Alu 1 302 -10 2452 140 23 44 chr5 79020617 79020982 -120609168 - MSTA LTR MaLR -71 357 1 9598 150 30 27 chr5 79020984 79022622 -120607528 - MSTA-int LTR MaLR -8 1643 1 2152 118 59 21 chr5 79022622 79022961 -120607189 - MSTA LTR MaLR 0 428 77 3521 83 17 81 chr5 79023064 79023439 -120606711 + L1MA1 LINE L1 5758 6085 -217 2120 112 33 3 chr5 79023439 79023743 -120606407 + AluSq SINE Alu 1 313 0 3521 83 17 81 chr5 79023743 79023948 -120606202 + L1MA1 LINE L1 6085 6301 -1 26 0 0 0 chr5 79023948 79023974 -120606176 + AT_rich Low_complexity Low_complexity 1 26 0 324 179 192 60 chr5 79024551 79024616 -120605534 - L1ME4a LINE L1 -2 6119 6064 2307 83 24 0 chr5 79024616 79024906 -120605244 + AluSp SINE Alu 5 301 -12 324 179 192 60 chr5 79024906 79024991 -120605159 - L1ME4a LINE L1 -57 6064 5949 2510 121 115 12 chr5 79025017 79025571 -120604579 - MER4E LTR ERV1 0 766 3 1338 177 5 0 chr5 79025945 79026154 -120603996 - AluJb SINE Alu -17 295 86 1505 171 75 136 chr5 79026358 79027028 -120603122 + MER4A LTR ERV1 1 462 -3 192 77 0 0 chr5 79027307 79027333 -120602817 + (CACCAT)n Simple_repeat Simple_repeat 5 30 0 194 333 40 40 chr5 79027402 79027579 -120602571 - MER5A DNA MER1_type -5 184 8 401 132 15 0 chr5 79027896 79027964 -120602186 + MER5A DNA MER1_type 32 100 -89 505 285 28 34 chr5 79028082 79028261 -120601889 - MER5B DNA MER1_type 0 178 1 2249 120 3 3 chr5 79028338 79028647 -120601503 + AluSx SINE Alu 1 309 -3 274 345 0 9 chr5 79028651 79028767 -120601383 + L2 LINE L2 2736 2850 -464 921 181 12 0 chr5 79028830 79028990 -120601160 - FRAM SINE Alu -7 169 8 202 269 128 0 chr5 79029214 79029292 -120600858 - MIR SINE MIR -160 102 15 2148 131 10 0 chr5 79029331 79029637 -120600513 - AluSx SINE Alu -2 310 2 258 32 0 0 chr5 79030095 79030126 -120600024 + (GA)n Simple_repeat Simple_repeat 1 31 0 242 212 15 0 chr5 79030503 79030569 -120599581 + L1MA7 LINE L1 5988 6054 -237 785 169 135 0 chr5 79030571 79030719 -120599431 - AluSg/x SINE Alu -5 307 140 344 245 31 0 chr5 79030725 79030823 -120599327 + MIR SINE MIR 162 262 0 419 231 38 86 chr5 79031771 79031957 -120598193 + Charlie8 DNA MER1_type 93 269 -2148 1958 145 6 19 chr5 79032188 79032499 -120597651 + AluSx SINE Alu 1 307 -5 575 239 105 81 chr5 79032997 79033218 -120596932 + MLT1L LTR MaLR 263 485 -26 417 73 18 0 chr5 79033218 79033273 -120596877 + MSTA LTR MaLR 1 56 -372 1485 137 0 5 chr5 79033273 79033484 -120596666 + AluSx SINE Alu 1 210 -102 1586 113 5 5 chr5 79033584 79033797 -120596353 + AluSg/x SINE Alu 74 286 -24 1411 189 197 51 chr5 79033818 79034321 -120595829 - L1MC4 LINE L1 -743 5403 5349 1961 119 16 50 chr5 79034321 79034640 -120595510 - AluSg SINE Alu -2 308 1 1411 189 197 51 chr5 79034640 79034797 -120595353 - L1MC4 LINE L1 -797 5349 5216 702 195 0 8 chr5 79034807 79034930 -120595220 - AluJ SINE Alu -20 292 171 1461 112 0 5 chr5 79034930 79035127 -120595023 - AluSq SINE Alu -58 255 60 980 157 17 52 chr5 79035278 79035450 -120594700 - AluJ SINE Alu -146 166 1 831 196 40 87 chr5 79035453 79035576 -120594574 - L1MC4 LINE L1 -945 5201 5074 996 189 53 10 chr5 79035576 79035782 -120594368 + MER20 DNA MER1_type 1 215 -4 831 196 40 87 chr5 79035782 79035807 -120594343 - L1MC4 LINE L1 -1072 5074 5049 812 196 0 0 chr5 79035807 79035940 -120594210 - FLAM_A SINE Alu 0 133 1 831 196 40 87 chr5 79035940 79036007 -120594143 - L1MC4 LINE L1 -1097 5049 4998 2263 126 0 0 chr5 79036007 79036317 -120593833 - AluY SINE Alu -1 310 1 831 196 40 87 chr5 79036317 79036375 -120593775 - L1MC4 LINE L1 -1148 4998 4939 1830 177 3 3 chr5 79036436 79036735 -120593415 - AluJb SINE Alu -13 299 1 2684 136 66 66 chr5 79036763 79037235 -120592915 - L1MA9 LINE L1 -9 6303 5832 2169 124 0 0 chr5 79037235 79037533 -120592617 - AluSg SINE Alu -9 301 4 2684 136 66 66 chr5 79037533 79037582 -120592568 - L1MA9 LINE L1 -480 5832 5784 519 17 0 0 chr5 79037582 79037642 -120592508 + (TA)n Simple_repeat Simple_repeat 1 60 0 2684 136 66 66 chr5 79037642 79037706 -120592444 - L1MA9 LINE L1 -527 5785 5717 902 206 43 57 chr5 79037713 79037912 -120592238 - L1MC4 LINE L1 -1199 4947 4752 2383 88 0 0 chr5 79037912 79038208 -120591942 - AluY SINE Alu -15 296 1 902 206 43 57 chr5 79038208 79038290 -120591860 - L1MC4 LINE L1 -1394 4752 4670 3098 140 47 44 chr5 79038467 79038499 -120591651 - MER4D LTR ERV1 -110 793 763 1845 161 3 36 chr5 79038499 79038804 -120591346 - AluJo SINE Alu -17 295 1 3098 140 47 44 chr5 79038804 79038932 -120591218 - MER4D LTR ERV1 -140 763 637 2278 108 0 13 chr5 79038932 79039238 -120590912 + AluSx SINE Alu 1 302 -10 3098 140 47 44 chr5 79039238 79039779 -120590371 - MER4D LTR ERV1 -266 637 19 885 171 0 0 chr5 79039779 79039919 -120590231 - FLAM_C SINE Alu -3 140 1 403 244 0 35 chr5 79040007 79040122 -120590028 + L2 LINE L2 2231 2341 -973 2779 178 75 0 chr5 79040129 79040647 -120589503 - LTR64 LTR ERVK 0 558 2 2160 123 0 13 chr5 79040721 79041022 -120589128 - AluSx SINE Alu -15 297 1 197 253 130 58 chr5 79041050 79041204 -120588946 + L2 LINE L2 2550 2714 -600 288 284 64 9 chr5 79041548 79041657 -120588493 + L2 LINE L2 3158 3272 0 2147 133 0 0 chr5 79041835 79042135 -120588015 + AluSx SINE Alu 1 300 -12 2197 114 34 0 chr5 79042877 79043174 -120586976 + AluSx SINE Alu 1 307 -5 751 195 31 0 chr5 79043503 79043678 -120586472 + L1MA10 LINE L1 5988 6333 -1 207 333 0 14 chr5 79043685 79043754 -120586396 - MIR SINE MIR -102 106 39 2928 126 32 22 chr5 79043911 79044372 -120585778 - Tigger3b DNA MER2_type -1 1231 766 2691 154 78 47 chr5 79044352 79044374 -120585776 - Tigger3b DNA MER2_type -2460 568 548 * 2126 145 0 0 chr5 79044374 79044678 -120585472 + AluSq SINE Alu 1 304 -9 2691 154 78 47 chr5 79044678 79044912 -120585238 - Tigger3b DNA MER2_type -2480 548 323 2162 117 3 0 chr5 79044912 79045203 -120584947 + AluSg SINE Alu 1 292 -18 2691 154 78 47 chr5 79045203 79045216 -120584934 - Tigger3b DNA MER2_type -2705 323 312 2062 144 3 6 chr5 79045216 79045528 -120584622 + AluSx SINE Alu 1 311 -1 2691 154 78 47 chr5 79045528 79045807 -120584343 - Tigger3b DNA MER2_type -2716 312 1 2505 53 0 0 chr5 79046081 79046395 -120583755 + AluY SINE Alu 1 314 0 240 261 23 23 chr5 79046492 79046580 -120583570 + MIR3 SINE MIR 115 202 -6 5969 111 3 25 chr5 79046921 79047851 -120582299 + HERVH LTR ERV1 2086 2995 -4718 3994 128 5 2 chr5 79047830 79048425 -120581725 + HERVH LTR ERV1 3140 3736 -3977 * 6675 106 2 6 chr5 79048435 79049367 -120580783 + HERVH LTR ERV1 3995 4910 -2803 1403 192 4 7 chr5 79049367 79049638 -120580512 + HERVH LTR ERV1 5747 6016 -1697 288 159 175 16 chr5 79049631 79049694 -120580456 + HERVH LTR ERV1 7157 7229 -484 * 3123 97 0 0 chr5 79049694 79050117 -120580033 + HERVH LTR ERV1 7196 7618 -95 783 278 115 45 chr5 79050117 79050214 -120579936 + L2 LINE L2 1822 1911 -1403 1377 167 107 65 chr5 79050214 79050646 -120579504 + LTR7 LTR ERV1 1 450 0 783 278 115 45 chr5 79050646 79051106 -120579044 + L2 LINE L2 1911 2418 -896 622 247 111 90 chr5 79051138 79051615 -120578535 - MLT1J LTR MaLR -12 499 13 893 278 28 17 chr5 79051626 79051917 -120578233 + L2 LINE L2 2457 2750 -564 505 229 49 13 chr5 79051920 79052165 -120577985 - LTR16C LTR ERVL 0 491 211 650 161 9 0 chr5 79053369 79053481 -120576669 + MER53 DNA DNA 1 113 -76 2137 127 0 7 chr5 79053876 79054175 -120575975 + AluSx SINE Alu 1 297 -15 2409 47 0 24 chr5 79055359 79055656 -120574494 + AluY SINE Alu 4 293 -18 25 31 0 0 chr5 79055825 79055857 -120574293 + AT_rich Low_complexity Low_complexity 1 32 0 2105 108 42 0 chr5 79056949 79057235 -120572915 + AluSx SINE Alu 1 298 -14 28228 85 2 6 chr5 79057389 79061054 -120569096 + Harlequin LTR ERV1 339 3987 -4412 6128 93 13 6 chr5 79061051 79061892 -120568258 + Harlequin LTR ERV1 4108 4954 -3445 * 2515 161 108 74 chr5 79061885 79062737 -120567413 + Harlequin LTR ERV1 840 1720 -5176 * 5050 89 0 0 chr5 79062732 79063375 -120566775 + Harlequin LTR ERV1 7757 8399 0 4585 55 39 137 chr5 79063375 79064137 -120566013 + LTR12 LTR ERV1 1 688 0 2438 77 3 3 chr5 79064140 79064438 -120565712 + AluY SINE Alu 1 298 -13 2154 94 0 17 chr5 79064439 79064769 -120565381 + AluY SINE Alu 2 326 0 2700 247 51 22 chr5 79064779 79065024 -120565126 + L1M4 LINE L1 2111 2347 -3799 2093 103 7 0 chr5 79065024 79065296 -120564854 + AluSg SINE Alu 26 299 -11 2700 247 51 22 chr5 79065296 79065952 -120564198 + L1M4 LINE L1 2347 3038 -3108 2114 133 7 0 chr5 79065960 79066261 -120563889 + AluSx SINE Alu 1 303 -9 276 122 61 0 chr5 79066314 79066363 -120563787 + L1MD1 LINE L1 6182 6233 -9 1942 149 24 0 chr5 79066662 79066957 -120563193 + AluSx SINE Alu 1 302 -10 538 302 90 16 chr5 79067011 79067326 -120562824 - L1MC/D LINE L1 -355 5766 5437 1916 172 0 0 chr5 79067326 79067622 -120562528 - AluJb SINE Alu -14 298 3 538 302 90 16 chr5 79067622 79067648 -120562502 - L1MC/D LINE L1 -684 5437 5414 5760 162 25 2 chr5 79067652 79068629 -120561521 - L1MC1 LINE L1 -5 6328 5330 495 145 0 0 chr5 79068637 79068720 -120561430 + (TCCC)n Simple_repeat Simple_repeat 3 85 0 1649 180 33 16 chr5 79068722 79069028 -120561122 - AluJo SINE Alu -1 311 1 2335 93 3 3 chr5 79069032 79069334 -120560816 - AluSx SINE Alu -10 302 1 395 74 25 14 chr5 79069341 79069432 -120560718 - L1MC1 LINE L1 -822 5324 5230 250 179 170 19 chr5 79070353 79070459 -120559691 - L1ME LINE L1 -298 5823 5702 1737 123 0 49 chr5 79070837 79071161 -120558989 + AluSx SINE Alu 1 308 -4 1964 160 125 32 chr5 79071209 79071655 -120558495 + LTR48 LTR ERV1 1 624 -163 2285 85 7 7 chr5 79071655 79071977 -120558173 - AluY SINE Alu 0 311 1 1964 160 125 32 chr5 79071977 79072158 -120557992 + LTR48 LTR ERV1 624 787 0 797 225 106 42 chr5 79072190 79072594 -120557556 - L1MC5 LINE L1 -264 7697 7268 369 253 149 45 chr5 79072895 79072991 -120557159 + MER5A DNA MER1_type 20 139 -50 3668 140 55 10 chr5 79072991 79073607 -120556543 + LTR48B LTR ERV1 1 644 0 369 253 149 45 chr5 79073607 79073664 -120556486 + MER5A DNA MER1_type 139 189 0 1304 236 138 58 chr5 79073716 79073785 -120556365 - MLT1F LTR MaLR -1 541 479 2204 104 0 10 chr5 79073785 79074083 -120556067 + AluSx SINE Alu 1 295 -17 1304 236 138 58 chr5 79074083 79074513 -120555637 - MLT1F LTR MaLR -63 479 2 2036 152 0 0 chr5 79074841 79075143 -120555007 + AluSx SINE Alu 1 302 -10 221 307 88 44 chr5 79076989 79077103 -120553047 - MIR SINE MIR -62 146 28 1834 162 3 13 chr5 79077890 79078198 -120551952 - AluJo SINE Alu -7 305 1 1754 166 3 28 chr5 79080247 79080567 -120549583 - AluJb SINE Alu 0 312 1 899 161 0 36 chr5 79080573 79080741 -120549409 - MLT1A2 LTR MaLR -212 162 1 27 0 0 0 chr5 79081159 79081186 -120548964 + AT_rich Low_complexity Low_complexity 1 27 0 2162 118 0 7 chr5 79081511 79081808 -120548342 - AluSx SINE Alu -17 295 1 342 252 28 37 chr5 79082717 79082824 -120547326 - MIR SINE MIR -20 242 137 1758 124 92 3 chr5 79082877 79083192 -120546958 - L1MB4 LINE L1 -2 6178 5836 402 278 40 8 chr5 79083192 79083318 -120546832 - MIR SINE MIR -118 144 15 307 310 103 29 chr5 79083328 79083502 -120546648 + MER5A DNA MER1_type 2 188 -1 1741 133 28 115 chr5 79083617 79084017 -120546133 + MLT1A1 LTR MaLR 1 365 0 2200 98 0 33 chr5 79084924 79085231 -120544919 - AluSq SINE Alu -16 297 1 338 270 54 75 chr5 79085257 79085683 -120544467 + L1ME4a LINE L1 5705 6121 0 736 277 209 45 chr5 79085708 79085771 -120544379 + HAL1 LINE L1 11 62 -2445 369 0 0 0 chr5 79085771 79085812 -120544338 + (CA)n Simple_repeat Simple_repeat 2 42 0 736 277 209 45 chr5 79085812 79086308 -120543842 + HAL1 LINE L1 62 662 -1845 23 54 0 0 chr5 79086528 79086565 -120543585 + AT_rich Low_complexity Low_complexity 1 37 0 1963 158 10 0 chr5 79086628 79086925 -120543225 + AluJo SINE Alu 1 300 -12 224 321 0 0 chr5 79086942 79087023 -120543127 + CT-rich Low_complexity Low_complexity 2 82 0 1570 145 21 0 chr5 79087037 79087278 -120542872 + AluSg/x SINE Alu 65 310 0 2194 188 51 5 chr5 79087280 79087710 -120542440 - MER39B LTR ERV1 -203 450 1 997 243 44 7 chr5 79087710 79087982 -120542168 - L1M4 LINE L1 -963 5183 4902 2595 60 0 0 chr5 79088305 79088606 -120541544 - AluY SINE Alu -10 301 1 2291 105 7 0 chr5 79088672 79088967 -120541183 - AluSq SINE Alu -16 297 1 2441 81 3 0 chr5 79089032 79089328 -120540822 + AluSc SINE Alu 1 297 -12 2361 119 0 0 chr5 79089556 79089867 -120540283 - AluSx SINE Alu -1 311 1 1607 143 55 0 chr5 79089869 79090141 -120540009 - L1MC3 LINE L1 -145 7640 7354 242 0 0 0 chr5 79090164 79090190 -120539960 + MLT2C2 LTR ERVL 439 464 0 724 67 0 0 chr5 79090190 79090279 -120539871 - MSTA LTR MaLR -11 417 329 750 85 0 19 chr5 79090282 79090388 -120539762 - MER4C LTR ERV1 -361 104 1 2683 104 3 3 chr5 79090397 79090761 -120539389 + THE1B LTR MaLR 1 364 0 2076 163 42 39 chr5 79090761 79091167 -120538983 - L1MC3 LINE L1 -482 7303 6897 2079 124 13 3 chr5 79091268 79091566 -120538584 - AluSq SINE Alu -12 301 1 879 233 93 70 chr5 79092041 79092164 -120537986 - MLT1G LTR MaLR 0 590 471 703 46 0 0 chr5 79092164 79092251 -120537899 - L1PA4 LINE L1 0 6155 6069 879 233 93 70 chr5 79092251 79092641 -120537509 - MLT1G LTR MaLR -119 471 5 544 255 46 25 chr5 79092698 79092894 -120537256 + LTR33 LTR ERVL 314 513 -8 1012 164 47 19 chr5 79093019 79093233 -120536917 - MER96B DNA MER1_type? -195 222 3 4120 196 26 49 chr5 79094113 79095105 -120535045 + LTR5 LTR ERVK 1 969 0 22 0 0 0 chr5 79095908 79095930 -120534220 + AT_rich Low_complexity Low_complexity 1 22 0 4211 161 20 13 chr5 79096647 79097198 -120532952 + L1MB1 LINE L1 4615 5175 -1137 2010 135 0 0 chr5 79097198 79097505 -120532645 + AluSx SINE Alu 1 307 0 4211 161 20 13 chr5 79097505 79097956 -120532194 + L1MB1 LINE L1 5175 5621 -691 1908 70 0 29 chr5 79097988 79098260 -120531890 + L1PA13 LINE L1 5888 6151 -12 2237 93 0 16 chr5 79098265 79098577 -120531573 + AluY SINE Alu 1 307 -4 3454 134 20 5 chr5 79098584 79099144 -120531006 + L1MB1 LINE L1 5600 6167 -1 211 326 0 0 chr5 79100456 79100505 -120529645 + (CGTG)n Simple_repeat Simple_repeat 2 50 0 2227 68 39 4 chr5 79105623 79105902 -120524248 + AluY SINE Alu 8 296 -15 804 146 8 0 chr5 79106221 79106344 -120523806 + FLAM_C SINE Alu 1 124 -19 2327 86 0 0 chr5 79106556 79106846 -120523304 - AluSg1 SINE Alu -19 290 1 2183 131 3 0 chr5 79107040 79107345 -120522805 + AluSx SINE Alu 1 306 -6 37 86 0 0 chr5 79107403 79107496 -120522654 + AT_rich Low_complexity Low_complexity 1 93 0 704 252 154 48 chr5 79109123 79109709 -120520441 - L2 LINE L2 0 3313 2659 2318 104 0 13 chr5 79109921 79110229 -120519921 - AluSg SINE Alu -6 304 1 215 79 26 0 chr5 79110892 79110930 -120519220 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2230 101 0 0 chr5 79110934 79111210 -120518940 - AluSx SINE Alu -30 282 7 225 108 0 0 chr5 79111237 79111274 -120518876 + (TG)n Simple_repeat Simple_repeat 2 38 0 559 238 109 0 chr5 79111402 79111549 -120518601 - MER45A DNA AcHobo -15 163 1 839 140 0 22 chr5 79111659 79111795 -120518355 + FLAM_C SINE Alu 1 133 0 342 221 15 0 chr5 79113662 79113730 -120516420 - MER2 DNA MER2_type 0 345 277 1975 116 4 11 chr5 79113734 79114011 -120516139 + AluSx SINE Alu 1 275 -37 700 145 0 8 chr5 79114054 79114171 -120515979 + FLAM_C SINE Alu 24 139 -4 1199 106 9 93 chr5 79114193 79114419 -120515731 - MER2 DNA MER2_type -135 210 4 4444 101 17 6 chr5 79114964 79115185 -120514965 - MER51C LTR ERV1 -1 639 422 2381 76 3 0 chr5 79115185 79115475 -120514675 - AluSp SINE Alu -17 296 6 4444 101 17 6 chr5 79115475 79115885 -120514265 - MER51C LTR ERV1 -218 422 1 21 0 0 0 chr5 79116011 79116032 -120514118 + AT_rich Low_complexity Low_complexity 1 21 0 2002 164 3 0 chr5 79116123 79116433 -120513717 + AluSx SINE Alu 1 311 -1 278 135 157 11 chr5 79116749 79116838 -120513312 - MER20B DNA MER1_type -156 627 526 2360 99 0 0 chr5 79116865 79117159 -120512991 - AluSg SINE Alu -16 294 1 268 233 33 0 chr5 79117270 79117360 -120512790 - MER20B DNA MER1_type -466 317 225 316 242 92 17 chr5 79117399 79117519 -120512631 - MER20B DNA MER1_type -644 139 11 219 139 0 0 chr5 79118170 79118206 -120511944 + (CA)n Simple_repeat Simple_repeat 1 36 0 2238 113 13 3 chr5 79119099 79119408 -120510742 - AluSx SINE Alu 0 312 1 215 61 30 0 chr5 79119689 79119722 -120510428 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 473 206 135 14 chr5 79120311 79120452 -120509698 + MIR SINE MIR 3 160 -102 189 147 0 0 chr5 79120732 79120766 -120509384 + (CCCTAA)n Simple_repeat Simple_repeat 4 37 0 1462 180 47 43 chr5 79121203 79121380 -120508770 - AluJo SINE Alu -11 301 121 2262 96 10 0 chr5 79121380 79121672 -120508478 + AluSq SINE Alu 1 295 -18 1462 180 47 43 chr5 79121672 79121794 -120508356 - AluJo SINE Alu -191 121 1 1013 255 107 26 chr5 79122000 79122310 -120507840 + MLT1J2 LTR MaLR 70 404 -46 2073 107 3 52 chr5 79122972 79123145 -120507005 - AluSx SINE Alu -17 295 115 237 33 0 0 chr5 79123145 79123175 -120506975 + (TTA)n Simple_repeat Simple_repeat 1 30 0 1982 109 0 79 chr5 79123175 79123479 -120506671 - AluSx SINE Alu -32 280 1 2073 107 3 52 chr5 79123479 79123614 -120506536 - AluSx SINE Alu -195 117 1 2402 101 0 3 chr5 79124683 79124989 -120505161 + AluSx SINE Alu 1 305 -7 232 143 54 0 chr5 79124993 79125049 -120505101 - L1MCa LINE L1 -4362 2064 2006 * 271 255 0 43 chr5 79125020 79125114 -120505036 - L1MC4 LINE L1 -1339 6983 6894 268 208 0 62 chr5 79125032 79125128 -120505022 + L1MC4 LINE L1 6614 6703 -1339 * 280 306 76 10 chr5 79125637 79125785 -120504365 + MIR SINE MIR 5 162 -71 9388 104 37 13 chr5 79126439 79127834 -120502316 + Tigger1 DNA MER2_type 1 1428 -990 2913 123 17 38 chr5 79127834 79128307 -120501843 + Tigger1 DNA MER2_type 1769 2231 -187 735 219 5 78 chr5 79128323 79128515 -120501635 - AluJb SINE Alu -1 311 134 2234 101 7 0 chr5 79128523 79128811 -120501339 - AluSc SINE Alu -19 290 1 1242 141 15 0 chr5 79128811 79129009 -120501141 + Tigger1 DNA MER2_type 2218 2418 0 278 271 118 97 chr5 79129061 79129132 -120501018 - MIR SINE MIR -114 148 80 2840 6 0 13 chr5 79129132 79129444 -120500706 + AluY SINE Alu 1 308 -3 278 271 118 97 chr5 79129444 79129516 -120500634 - MIR SINE MIR -182 80 2 1134 163 15 5 chr5 79129730 79129932 -120500218 + MLT2D LTR ERVL 21 224 -190 256 94 4 0 chr5 79129931 79129971 -120500179 + MLT2C1 LTR ERVL 354 411 -3 * 1928 141 10 10 chr5 79131282 79131572 -120498578 + AluJb SINE Alu 1 290 -22 613 222 28 11 chr5 79131579 79131755 -120498395 - MIR SINE MIR -6 256 78 387 0 0 0 chr5 79131981 79132024 -120498126 + (TTTTA)n Simple_repeat Simple_repeat 1 43 0 2075 57 0 16 chr5 79132024 79132272 -120497878 - AluY SINE Alu -32 279 36 2164 110 7 0 chr5 79132420 79132712 -120497438 - AluSq SINE Alu -19 294 1 10871 25 16 115 chr5 79133026 79134559 -120495591 - SVA Other Other -1 1385 4 2181 137 0 0 chr5 79134677 79134977 -120495173 - AluSx SINE Alu -12 300 1 229 290 0 0 chr5 79134985 79135047 -120495103 - MER5A DNA MER1_type 0 189 128 256 75 0 0 chr5 79135211 79135251 -120494899 - L1MA1 LINE L1 -4 6298 6259 313 217 0 0 chr5 79135251 79135311 -120494839 - MER5A DNA MER1_type -114 75 16 1854 209 65 25 chr5 79136183 79136627 -120493523 + MLT1C LTR MaLR 6 467 0 225 0 0 0 chr5 79137147 79137172 -120492978 + (CA)n Simple_repeat Simple_repeat 2 26 0 2427 73 3 10 chr5 79137484 79137797 -120492353 + AluY SINE Alu 1 311 0 201 170 19 38 chr5 79137859 79137912 -120492238 + A-rich Low_complexity Low_complexity 4 55 0 244 211 19 0 chr5 79138311 79138363 -120491787 - MLT2B2 LTR ERVL -2 513 461 264 143 0 171 chr5 79138393 79138463 -120491687 - MLT2B1 LTR ERVL -262 258 201 1239 124 0 0 chr5 79138463 79138632 -120491518 - AluSg/x SINE Alu -12 298 130 1041 143 87 41 chr5 79138632 79138828 -120491322 - MLT2B1 LTR ERVL -315 205 1 2213 110 0 0 chr5 79138923 79139229 -120490921 - AluSg SINE Alu 0 306 1 624 270 102 15 chr5 79139381 79139905 -120490245 + MLT2F LTR ERVL 1 649 -14 487 263 7 32 chr5 79139943 79140090 -120490060 - MLT1H1 LTR MaLR 0 555 400 418 213 67 67 chr5 79140194 79140344 -120489806 - MLT1G LTR MaLR -23 544 395 204 40 0 0 chr5 79140383 79140408 -120489742 + (TC)n Simple_repeat Simple_repeat 2 26 0 2385 99 0 0 chr5 79140408 79140710 -120489440 - AluSx SINE Alu -10 302 1 426 244 0 67 chr5 79140741 79140860 -120489290 - MLT1G LTR MaLR -302 288 178 305 252 137 38 chr5 79140881 79141012 -120489138 - HAL1 LINE L1 -1487 1020 877 291 285 41 29 chr5 79141022 79141194 -120488956 - L1M LINE L1 -2380 5428 5255 1537 92 46 0 chr5 79141316 79141534 -120488616 + MER30 DNA MER1_type 3 230 0 364 234 13 0 chr5 79141669 79141746 -120488404 - MER5B DNA MER1_type -1 177 100 2161 147 0 3 chr5 79141836 79142149 -120488001 + AluJb SINE Alu 1 312 0 2373 100 0 0 chr5 79142241 79142540 -120487610 - AluSc SINE Alu -10 299 1 211 228 70 0 chr5 79142875 79142932 -120487218 + L2 LINE L2 3184 3244 -69 2461 84 3 0 chr5 79143335 79143634 -120486516 + AluSg SINE Alu 1 300 -10 520 235 0 17 chr5 79143942 79144087 -120486063 - FLAM_C SINE Alu 0 143 1 28 0 0 0 chr5 79144152 79144180 -120485970 + AT_rich Low_complexity Low_complexity 1 28 0 2386 96 7 0 chr5 79145082 79145385 -120484765 + AluSq SINE Alu 1 305 -8 183 176 0 0 chr5 79145423 79145457 -120484693 + MER5B DNA MER1_type 1 34 -144 367 252 112 28 chr5 79145505 79145648 -120484502 - MIR SINE MIR -106 156 2 207 338 0 0 chr5 79146037 79146114 -120484036 + MIR3 SINE MIR 110 186 -22 305 229 198 0 chr5 79146434 79146530 -120483620 - L2 LINE L2 -5 3308 3194 3830 106 2 11 chr5 79146837 79147392 -120482758 + L1PA16 LINE L1 5617 6166 0 2369 86 20 0 chr5 79148513 79148816 -120481334 - AluSx SINE Alu -3 309 1 298 294 28 9 chr5 79149000 79149109 -120481041 - MER5A DNA MER1_type -29 160 50 2016 111 39 0 chr5 79149189 79149469 -120480681 + AluSx SINE Alu 1 291 -21 231 114 0 0 chr5 79149478 79149513 -120480637 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 1000 137 91 17 chr5 79149514 79149689 -120480461 - MER5A DNA MER1_type -1 188 1 464 295 91 29 chr5 79150222 79150707 -120479443 - L1MC/D LINE L1 -804 5342 4937 1874 189 3 0 chr5 79150707 79151014 -120479136 - AluJb SINE Alu -4 308 1 464 295 91 29 chr5 79151014 79151137 -120479013 - L1MC/D LINE L1 -1209 4937 4823 1528 90 0 73 chr5 79151221 79151454 -120478696 + AluSg/x SINE Alu 80 295 -15 1029 98 0 0 chr5 79152501 79152633 -120477517 - FLAM_C SINE Alu -11 132 1 414 197 24 8 chr5 79152951 79153078 -120477072 + (CATATA)n Simple_repeat Simple_repeat 6 134 0 1801 179 51 102 chr5 79154200 79154666 -120475484 + MLT1D LTR MaLR 2 439 -66 634 57 11 0 chr5 79154666 79154754 -120475396 - L1PA5 LINE L1 -4 6150 6062 1801 179 51 102 chr5 79154754 79154818 -120475332 + MLT1D LTR MaLR 439 505 0 28 29 0 0 chr5 79155234 79155269 -120474881 + AT_rich Low_complexity Low_complexity 1 35 0 262 264 73 36 chr5 79156851 79156961 -120473189 + L2 LINE L2 3190 3303 -10 1542 97 24 247 chr5 79157047 79157376 -120472774 + THE1B LTR MaLR 3 199 -165 2019 85 58 0 chr5 79157376 79157635 -120472515 + AluSc SINE Alu 21 294 -15 1542 97 24 247 chr5 79157635 79157771 -120472379 + THE1B LTR MaLR 199 364 0 501 151 32 21 chr5 79159464 79159557 -120470593 + MIR SINE MIR 48 141 -121 896 214 10 82 chr5 79159584 79159878 -120470272 - L1MD2 LINE L1 -13 6346 6074 1738 202 60 53 chr5 79160076 79160545 -120469605 + MER74B LTR ERVL 55 530 -92 1617 167 19 42 chr5 79160545 79160856 -120469294 - AluJo SINE Alu -4 308 5 1738 202 60 53 chr5 79160856 79160950 -120469200 + MER74B LTR ERVL 530 622 0 458 310 65 7 chr5 79161770 79161925 -120468225 - MER5B DNA MER1_type -6 172 9 868 239 121 17 chr5 79162109 79162464 -120467686 - L1MC5 LINE L1 -603 7358 6967 1916 165 0 35 chr5 79162662 79162977 -120467173 + AluJo SINE Alu 1 304 -8 21 0 0 0 chr5 79163078 79163099 -120467051 + AT_rich Low_complexity Low_complexity 1 21 0 1146 206 0 0 chr5 79163553 79163767 -120466383 + AluJb SINE Alu 89 302 -10 2058 161 63 52 chr5 79163799 79164260 -120465890 + MER31B LTR ERV1 1 466 0 1008 219 64 5 chr5 79165590 79165732 -120464418 + MIR SINE MIR 1 162 -100 285 29 0 0 chr5 79165732 79165766 -120464384 + (ATG)n Simple_repeat Simple_repeat 2 35 0 1008 219 64 5 chr5 79165766 79165842 -120464308 + MIR SINE MIR 162 232 -30 199 136 250 0 chr5 79165814 79165858 -120464292 + L2 LINE L2 3250 3304 -9 * 534 223 0 33 chr5 79165911 79166079 -120464071 - MIR SINE MIR 0 262 57 28 0 0 0 chr5 79166608 79166636 -120463514 + AT_rich Low_complexity Low_complexity 1 28 0 453 116 0 0 chr5 79167426 79167495 -120462655 + (CA)n Simple_repeat Simple_repeat 2 70 0 1418 196 52 11 chr5 79167503 79167774 -120462376 - AluJb SINE Alu -30 282 1 218 191 60 60 chr5 79167794 79167962 -120462188 + (TTATA)n Simple_repeat Simple_repeat 1 168 0 385 277 58 66 chr5 79168433 79168570 -120461580 + L2 LINE L2 3136 3271 -1 331 284 10 10 chr5 79168712 79168814 -120461336 + MER117 DNA MER1_type 15 116 -81 22 0 0 0 chr5 79169124 79169146 -120461004 + AT_rich Low_complexity Low_complexity 1 22 0 2282 99 3 0 chr5 79169439 79169742 -120460408 - AluSc SINE Alu -5 304 1 270 0 0 0 chr5 79169743 79169773 -120460377 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2105 100 21 0 chr5 79169773 79170052 -120460098 - AluSp SINE Alu -28 285 1 1009 177 67 108 chr5 79170128 79170489 -120459661 - MER7A DNA MER2_type -2 344 1 324 313 37 15 chr5 79170963 79171097 -120459053 - MLT1J LTR MaLR -151 360 224 1123 121 19 37 chr5 79171132 79171444 -120458706 + THE1B LTR MaLR 1 364 0 456 261 54 25 chr5 79171458 79171657 -120458493 - MLT1J LTR MaLR -332 179 1 255 217 169 0 chr5 79172184 79172267 -120457883 + MER5C DNA MER1_type 228 324 0 680 303 102 26 chr5 79172898 79173396 -120456754 - MLT1H LTR MaLR -1 548 13 2116 172 64 14 chr5 79173404 79173839 -120456311 + MLT2B1 LTR ERVL 1 457 -63 2150 113 3 0 chr5 79173846 79174152 -120455998 + AluSx SINE Alu 1 307 0 574 153 30 46 chr5 79174201 79174332 -120455818 + Charlie8 DNA MER1_type 92 220 -2197 686 275 43 4 chr5 79174773 79175053 -120455097 + L1MC/D LINE L1 4552 4842 -1304 435 289 79 54 chr5 79175148 79175425 -120454725 + L1MC/D LINE L1 4996 5279 -867 230 248 37 89 chr5 79175438 79175652 -120454498 + L1MC/D LINE L1 5315 5517 -2291 319 232 13 90 chr5 79175757 79175912 -120454238 + MLT1J LTR MaLR 1 143 -368 356 226 39 94 chr5 79175967 79176148 -120454002 + MLT1J LTR MaLR 291 461 -50 2262 204 96 8 chr5 79176782 79177292 -120452858 - MER74A LTR ERVL 0 558 4 191 260 90 20 chr5 79177347 79177447 -120452703 - L2 LINE L2 -16 3256 3150 317 82 0 20 chr5 79177729 79177778 -120452372 + LTR59 LTR ERV1 1 48 -549 * 2987 133 0 4 chr5 79177775 79178242 -120451908 - LOR1a LTR ERV1 -32 465 1 2873 132 14 0 chr5 79178243 79178689 -120451461 + MER72 LTR ERV1 271 722 0 201 129 0 0 chr5 79179369 79179400 -120450750 + (CCG)n Simple_repeat Simple_repeat 2 32 0 245 242 253 0 chr5 79179889 79179980 -120450170 + MIR SINE MIR 38 151 -111 2022 97 7 45 chr5 79180201 79180511 -120449639 + AluSg SINE Alu 1 298 -12 252 0 0 0 chr5 79180842 79180870 -120449280 + (A)n Simple_repeat Simple_repeat 1 28 0 2480 44 17 7 chr5 79180881 79181177 -120448973 + AluY SINE Alu 1 299 -12 278 315 89 0 chr5 79181883 79182029 -120448121 + MIR SINE MIR 89 247 -15 459 241 108 6 chr5 79182057 79182215 -120447935 - MER96 DNA MER1_type? 0 175 2 234 218 144 81 chr5 79184616 79184901 -120445249 - L1MC5 LINE L1 -274 7687 7385 1530 136 17 4 chr5 79185324 79185560 -120444590 - AluSg/x SINE Alu -9 303 65 1618 185 20 7 chr5 79186085 79186383 -120443767 + AluJb SINE Alu 1 302 -10 30 0 0 0 chr5 79187036 79187066 -120443084 + AT_rich Low_complexity Low_complexity 1 30 0 339 210 0 12 chr5 79187810 79187891 -120442259 - MER116 DNA Mariner 0 80 1 2302 87 3 7 chr5 79188696 79188996 -120441154 - AluSp SINE Alu -14 299 1 26 0 0 0 chr5 79188999 79189025 -120441125 + AT_rich Low_complexity Low_complexity 1 26 0 441 73 49 12 chr5 79189378 79189460 -120440690 + (TCCTG)n Simple_repeat Simple_repeat 1 85 0 953 174 12 0 chr5 79189460 79189621 -120440529 - AluJb SINE Alu -21 291 129 2373 104 0 0 chr5 79189871 79190179 -120439971 + AluSx SINE Alu 1 308 -4 210 37 0 0 chr5 79190368 79190395 -120439755 + (T)n Simple_repeat Simple_repeat 1 27 0 6126 29 3 6 chr5 79190396 79191094 -120439056 - SVA Other Other 0 1386 691 495 353 75 36 chr5 79191361 79191922 -120438228 + HERV16 LTR ERVL 2902 3484 -2280 451 194 139 72 chr5 79192011 79192191 -120437959 + HERV16 LTR ERVL 3238 3429 -1567 360 319 65 32 chr5 79192397 79192613 -120437537 + HERV16 LTR ERVL 4018 4240 -1524 27 29 0 0 chr5 79192888 79192922 -120437228 + AT_rich Low_complexity Low_complexity 1 34 0 636 94 42 0 chr5 79195775 79195871 -120434279 - LTR12 LTR ERV1 0 714 615 331 255 10 0 chr5 79195874 79195972 -120434178 - LTR30 LTR ERV1 -80 642 544 1332 80 125 0 chr5 79195972 79196172 -120433978 - LTR12 LTR ERV1 -437 277 53 254 211 0 0 chr5 79196172 79196224 -120433926 - LTR30 LTR ERV1 -670 52 1 309 229 125 52 chr5 79196637 79196800 -120433350 + L1MC/D LINE L1 5294 5459 -885 421 251 80 0 chr5 79196801 79196988 -120433162 - HAL1b LINE L1 -257 1091 890 475 244 108 67 chr5 79197008 79197324 -120432826 - HAL1b LINE L1 -574 774 446 241 293 50 0 chr5 79197363 79197462 -120432688 - HAL1b LINE L1 -965 383 280 2775 10 0 0 chr5 79198738 79199045 -120431105 + AluYa5 SINE Alu 1 307 -4 1809 160 81 24 chr5 79199309 79199834 -120430316 + MLT2A2 LTR ERVL 1 554 0 1201 208 12 108 chr5 79199881 79200290 -120429860 + MLT1A2 LTR MaLR 1 370 -4 686 259 84 63 chr5 79200324 79200671 -120429479 + MER20B DNA MER1_type 1 354 -429 180 0 0 0 chr5 79203516 79203536 -120426614 + (CGGGGG)n Simple_repeat Simple_repeat 1 20 0 322 319 103 44 chr5 79203656 79203860 -120426290 + L1M2 LINE L1 709 924 -5925 707 156 74 25 chr5 79204236 79204358 -120425792 - AluJb SINE Alu -49 263 136 287 257 55 18 chr5 79204716 79204825 -120425325 + L1ME3A LINE L1 5314 5426 -2382 1538 257 41 48 chr5 79204934 79205029 -120425121 + L1ME3A LINE L1 5304 5398 -772 2459 85 0 0 chr5 79205029 79205324 -120424826 + AluY SINE Alu 1 295 -16 1538 257 41 48 chr5 79205324 79205835 -120424315 + L1ME3A LINE L1 5398 5906 -264 2254 110 0 0 chr5 79205948 79206239 -120423911 + AluJb SINE Alu 1 291 -21 3315 83 34 79 chr5 79206739 79207307 -120422843 - SVA Other Other -518 868 327 1956 89 0 8 chr5 79207838 79208095 -120422055 + AluSg SINE Alu 49 303 -7 1120 160 47 0 chr5 79208257 79208469 -120421681 + L1MA8 LINE L1 6066 6287 -4 757 161 112 7 chr5 79208771 79208914 -120421236 + MER33 DNA MER1_type 1 158 -166 411 177 13 0 chr5 79208910 79208989 -120421161 + MER33 DNA MER1_type 284 363 0 * 332 317 148 17 chr5 79208993 79209223 -120420927 - L2 LINE L2 -688 2626 2367 2014 161 33 6 chr5 79210143 79210478 -120419672 - MER2 DNA MER2_type 0 344 1 2129 116 0 14 chr5 79210531 79210825 -120419325 - AluSx SINE Alu -22 290 1 27 29 0 0 chr5 79210851 79210885 -120419265 + AT_rich Low_complexity Low_complexity 1 34 0 244 287 47 60 chr5 79211310 79211349 -120418801 - L2 LINE L2 -1 3312 3274 2051 106 18 11 chr5 79211349 79211657 -120418493 - AluSx SINE Alu 0 310 1 244 287 47 60 chr5 79211657 79211766 -120418384 - L2 LINE L2 -39 3274 3165 21 0 0 0 chr5 79212033 79212054 -120418096 + AT_rich Low_complexity Low_complexity 1 21 0 1903 147 16 16 chr5 79212549 79212856 -120417294 - AluJb SINE Alu -5 307 1 189 386 11 34 chr5 79213991 79214079 -120416071 + L2 LINE L2 3149 3234 -38 2183 105 7 7 chr5 79214095 79214391 -120415759 + AluSx SINE Alu 1 296 -16 29 0 0 0 chr5 79214717 79214746 -120415404 + AT_rich Low_complexity Low_complexity 1 29 0 878 121 52 35 chr5 79215406 79215579 -120414571 + L1MA8 LINE L1 6110 6285 -6 23 68 0 0 chr5 79216278 79216322 -120413828 + AT_rich Low_complexity Low_complexity 1 44 0 538 300 202 25 chr5 79216569 79217391 -120412759 - L2 LINE L2 -24 3289 2319 288 307 108 34 chr5 79217694 79217870 -120412280 - L1MC4a LINE L1 -1888 5920 5732 412 298 149 54 chr5 79217953 79218268 -120411882 + MLT1L LTR MaLR 118 462 -153 1766 142 3 50 chr5 79218642 79218945 -120411205 + AluSx SINE Alu 1 289 -23 2932 218 51 28 chr5 79218959 79219158 -120410992 + L1ME1 LINE L1 4698 4891 -1275 2155 123 3 0 chr5 79219158 79219460 -120410690 - AluSx SINE Alu -9 303 1 2932 218 51 28 chr5 79219460 79220429 -120409721 + L1ME1 LINE L1 4891 5892 -274 2468 190 16 5 chr5 79220449 79220881 -120409269 - MER70A LTR ERVL 0 472 36 690 203 46 0 chr5 79221005 79221158 -120408992 + L1MA10 LINE L1 6168 6327 -7 665 183 0 8 chr5 79221505 79221625 -120408525 - L2 LINE L2 0 3313 3195 2144 154 27 0 chr5 79222024 79222362 -120407788 - MER7A DNA MER2_type 0 346 2 1766 174 3 10 chr5 79222557 79222861 -120407289 - AluJo SINE Alu -10 302 1 966 265 107 17 chr5 79223349 79223704 -120406446 + MARNA DNA Mariner 183 569 -17 283 219 94 0 chr5 79223965 79224029 -120406121 + MIR3 SINE MIR 87 156 -52 237 250 48 39 chr5 79224156 79224260 -120405890 - L1ME4a LINE L1 -4 6117 6013 438 282 86 12 chr5 79225544 79225707 -120404443 + MIR SINE MIR 81 255 -7 610 282 95 21 chr5 79225811 79226052 -120404098 + MIR SINE MIR 2 260 -2 565 287 139 40 chr5 79226271 79226769 -120403381 + L1MC4 LINE L1 7496 8042 0 184 356 69 0 chr5 79226878 79226965 -120403185 - L2 LINE L2 -1354 1960 1868 890 85 8 0 chr5 79227002 79227131 -120403019 + (TA)n Simple_repeat Simple_repeat 1 130 0 359 241 51 177 chr5 79228263 79228931 -120401219 + L1M2 LINE L1 393 976 -5873 2261 57 18 4 chr5 79231728 79232007 -120398143 + L1PA6 LINE L1 5872 6154 0 490 312 75 10 chr5 79232079 79232387 -120397763 + L1MC4a LINE L1 5265 5592 -2403 2050 106 13 30 chr5 79232391 79232694 -120397456 - AluJb SINE Alu 0 312 15 299 338 84 7 chr5 79232856 79233010 -120397140 - L2 LINE L2 -6 3266 3101 2233 117 0 0 chr5 79233043 79233343 -120396807 + AluSq SINE Alu 1 300 -13 386 278 66 60 chr5 79233354 79233731 -120396419 + L1MC4a LINE L1 5629 5987 -134 25 0 0 0 chr5 79233877 79233902 -120396248 + AT_rich Low_complexity Low_complexity 1 25 0 2420 87 0 6 chr5 79233911 79234223 -120395927 + AluSq SINE Alu 1 310 -3 281 331 96 0 chr5 79235136 79235272 -120394878 - L2 LINE L2 -6 3266 3118 2237 129 16 38 chr5 79235285 79235657 -120394493 + THE1B LTR MaLR 1 364 0 25 0 0 0 chr5 79237308 79237333 -120392817 + AT_rich Low_complexity Low_complexity 1 25 0 277 194 129 0 chr5 79238661 79238723 -120391427 - MLT1I LTR MaLR -16 393 324 473 191 118 9 chr5 79238818 79238928 -120391222 + MER63 DNA MER1_type 4 751 -85 269 213 0 0 chr5 79238929 79238976 -120391174 + MER63 DNA MER1_type 979 1025 -37 4127 146 36 58 chr5 79239168 79239989 -120390161 - LTR1B LTR ERV1 -23 803 1 468 224 20 0 chr5 79240109 79240207 -120389943 + Charlie3 DNA MER1_type 1 100 -2610 1915 160 3 3 chr5 79340440 79340727 -120289423 + AluJo SINE Alu 1 287 -25 211 255 0 0 chr5 79340730 79340777 -120289373 + G-rich Low_complexity Low_complexity 1 47 0 443 187 90 42 chr5 79340818 79340956 -120289194 + MIR SINE MIR 87 231 -31 888 282 19 31 chr5 79341745 79342004 -120288146 + MIR SINE MIR 7 262 0 2281 238 41 7 chr5 79342639 79343243 -120286907 + L1ME1 LINE L1 5537 6161 -5 2181 93 16 22 chr5 79343626 79343939 -120286211 + AluY SINE Alu 1 311 0 366 317 40 31 chr5 79344363 79344562 -120285588 - L1ME LINE L1 -5906 490 44 543 278 87 30 chr5 79344895 79345128 -120285022 + MIR SINE MIR 20 262 0 2407 36 0 0 chr5 79346227 79346531 -120283619 + AluY SINE Alu 1 304 0 3984 228 90 21 chr5 79347374 79347601 -120282549 + L1MDb LINE L1 782 992 -5414 3132 171 10 0 chr5 79347601 79348116 -120282034 + MLT2B1 LTR ERVL 1 520 0 3984 228 90 21 chr5 79348116 79349910 -120280240 + L1MDb LINE L1 992 2929 -3477 1990 207 66 35 chr5 79349913 79350431 -120279719 + L2 LINE L2 1740 2273 -1041 650 294 76 14 chr5 79350413 79350620 -120279530 + L2 LINE L2 2835 3054 -259 737 235 54 0 chr5 79350620 79350786 -120279364 + MIR SINE MIR 2 176 -86 388 285 7 60 chr5 79350790 79350941 -120279209 + L2 LINE L2 3167 3309 -4 231 36 0 0 chr5 79351033 79351061 -120279089 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 213 209 257 76 chr5 79351073 79351178 -120278972 + L2 LINE L2 3190 3313 0 356 322 25 0 chr5 79351719 79351840 -120278310 - MIR SINE MIR -22 240 117 236 217 0 0 chr5 79352702 79352748 -120277402 + L2 LINE L2 3222 3267 -5 21 0 0 0 chr5 79352859 79352880 -120277270 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr5 79352978 79353024 -120277126 + (CA)n Simple_repeat Simple_repeat 1 46 0 498 284 76 10 chr5 79354638 79355056 -120275094 + LTR33 LTR ERVL 21 521 0 201 231 8 146 chr5 79355868 79355934 -120274216 - MER5B DNA MER1_type 0 178 137 1633 155 79 0 chr5 79355934 79356212 -120273938 + AluSx SINE Alu 1 300 -12 201 231 8 146 chr5 79356212 79356275 -120273875 - MER5B DNA MER1_type -41 137 67 3885 184 21 7 chr5 79356493 79357245 -120272905 + L1MB7 LINE L1 5403 6165 -19 292 269 41 102 chr5 79358056 79358253 -120271897 + L2 LINE L2 2911 3095 -177 1596 217 111 31 chr5 79358303 79358774 -120271376 + MLT1E LTR MaLR 7 587 -6 257 344 57 25 chr5 79358796 79358918 -120271232 + L2 LINE L2 3142 3267 -5 318 183 12 73 chr5 79359200 79359282 -120270868 - L1MC4a LINE L1 -1031 6777 6701 4763 233 69 44 chr5 79360110 79360785 -120269365 + L1MC5 LINE L1 5673 6329 -1632 311 44 22 0 chr5 79360785 79360830 -120269320 + (TG)n Simple_repeat Simple_repeat 1 46 0 4763 233 69 44 chr5 79360830 79362334 -120267816 + L1MC5 LINE L1 6329 7926 -35 294 276 83 58 chr5 79362377 79362533 -120267617 - MIR SINE MIR 0 262 103 245 364 30 0 chr5 79362881 79362980 -120267170 - LTR33A LTR ERVL -363 160 59 1065 180 35 103 chr5 79363157 79363284 -120266866 + MER33 DNA MER1_type 9 143 -2442 1452 31 0 0 chr5 79363284 79363443 -120266707 + L1PA3 LINE L1 5994 6152 -3 1065 180 35 103 chr5 79363443 79363654 -120266496 + MER33 DNA MER1_type 143 324 0 239 125 0 25 chr5 79364084 79364124 -120266026 - AluSg SINE Alu -9 291 253 1648 112 0 0 chr5 79364124 79364338 -120265812 - AluSg SINE Alu -96 214 1 256 317 1 1 chr5 79364491 79364565 -120265585 - MIR SINE MIR -94 114 46 1406 208 84 85 chr5 79364853 79365635 -120264515 + L1MC5 LINE L1 6880 7746 -215 333 263 21 0 chr5 79365726 79365821 -120264329 + MIR SINE MIR 64 160 -102 180 306 0 0 chr5 79367895 79367944 -120262206 - MIR SINE MIR -6 256 208 246 296 30 76 chr5 79368272 79368404 -120261746 + MIR SINE MIR 89 214 -48 1934 132 10 7 chr5 79368844 79369139 -120261011 + AluJb SINE Alu 1 296 -16 935 263 143 36 chr5 79369781 79370063 -120260087 + LTR33 LTR ERVL 1 251 -270 2424 118 36 17 chr5 79370063 79370420 -120259730 + THE1B LTR MaLR 1 364 0 935 263 143 36 chr5 79370420 79370605 -120259545 + LTR33 LTR ERVL 251 518 -3 1225 144 27 21 chr5 79371766 79371954 -120258196 + MER5A DNA MER1_type 1 189 0 228 37 0 0 chr5 79374091 79374118 -120256032 + L2 LINE L2 3267 3293 -20 1300 198 78 85 chr5 79376886 79377296 -120252854 - LTR16A LTR ERVL -5 445 39 199 200 0 0 chr5 79378645 79378680 -120251470 + L3 LINE CR1 1540 1574 -3 420 285 49 8 chr5 79378901 79379024 -120251126 + MIR SINE MIR 2 129 -133 25 0 0 0 chr5 79379084 79379109 -120251041 + AT_rich Low_complexity Low_complexity 1 25 0 1158 254 80 64 chr5 79379289 79379818 -120250332 + L2 LINE L2 2773 3313 0 185 330 31 10 chr5 79381054 79381151 -120248999 - L2 LINE L2 -342 2972 2874 2242 107 3 7 chr5 79381359 79381658 -120248492 - AluSx SINE Alu -14 298 1 180 0 0 0 chr5 79381715 79381735 -120248415 + (A)n Simple_repeat Simple_repeat 1 20 0 366 327 119 0 chr5 79381966 79382067 -120248083 - L2 LINE L2 0 3272 3160 206 121 0 0 chr5 79382251 79382284 -120247866 + (TCCA)n Simple_repeat Simple_repeat 4 36 0 394 264 153 67 chr5 79382314 79382628 -120247522 - L2 LINE L2 -47 3225 2885 2863 137 5 31 chr5 79382790 79382886 -120247264 - Tigger2a DNA MER2_type -2274 434 337 1642 122 126 0 chr5 79382886 79383149 -120247001 + AluSx SINE Alu 1 296 -16 2863 137 5 31 chr5 79383149 79383498 -120246652 - Tigger2a DNA MER2_type -2371 337 1 1804 146 69 56 chr5 79383610 79383987 -120246163 + MLT1B LTR MaLR 1 382 -8 292 306 130 0 chr5 79384327 79384435 -120245715 + L2 LINE L2 3190 3311 -2 480 202 12 12 chr5 79385065 79385149 -120245001 - MER5A DNA MER1_type -104 85 2 183 45 0 91 chr5 79385172 79385216 -120244934 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 2097 258 79 28 chr5 79387041 79388178 -120241972 + L1MEc LINE L1 59 3376 -2839 1980 258 53 24 chr5 79388176 79388367 -120241783 + L1ME2 LINE L1 3014 3198 -2948 * 2038 130 3 16 chr5 79388367 79388674 -120241476 + AluSx SINE Alu 1 303 -9 1980 258 53 24 chr5 79388674 79389300 -120240850 + L1ME2 LINE L1 3198 3854 -2292 * 4496 162 25 64 chr5 79389292 79389811 -120240339 + L1MB5 LINE L1 4932 5469 -705 2694 144 21 28 chr5 79389811 79390248 -120239902 + Tigger2a DNA MER2_type 1 434 0 4496 162 25 64 chr5 79390248 79390396 -120239754 + L1MB5 LINE L1 5469 5621 -553 1219 201 167 45 chr5 79390396 79390749 -120239401 + MSTD LTR MaLR 1 396 0 4496 162 25 64 chr5 79390749 79391367 -120238783 + L1MB5 LINE L1 5621 6174 0 * 5281 209 55 35 chr5 79391361 79393586 -120236564 + L1ME2 LINE L1 3839 6120 -44 4059 118 2 2 chr5 79393586 79394112 -120236038 + MER1A DNA MER1_type 2 527 0 2578 44 0 3 chr5 79394132 79394427 -120235723 + AluY SINE Alu 1 294 -17 1824 198 36 33 chr5 79394498 79394887 -120235263 + MLT1B LTR MaLR 1 390 0 210 233 0 0 chr5 79395734 79395777 -120234373 - MIR3 SINE MIR -19 189 147 * 1133 280 121 21 chr5 79395752 79396398 -120233752 + L2 LINE L2 2450 3148 -165 223 137 20 20 chr5 79396409 79396460 -120233690 + CT-rich Low_complexity Low_complexity 5 55 0 232 213 0 0 chr5 79396508 79396555 -120233595 + L2 LINE L2 3265 3311 -2 204 203 0 51 chr5 79397085 79397144 -120233006 + CT-rich Low_complexity Low_complexity 4 59 0 204 203 0 51 chr5 79398174 79398233 -120231917 + CT-rich Low_complexity Low_complexity 4 59 0 226 277 0 46 chr5 79399167 79399232 -120230918 + MIR3 SINE MIR 14 75 -133 2207 229 68 35 chr5 79399236 79399869 -120230281 - HsTC2c DNA Tc2 0 729 76 615 217 288 0 chr5 79400786 79400984 -120229166 - MIR SINE MIR 0 262 8 2444 143 21 10 chr5 79401268 79401654 -120228496 + MLT1B LTR MaLR 1 390 0 531 276 34 92 chr5 79401674 79402000 -120228150 + MLT1I LTR MaLR 40 346 -63 26 0 0 0 chr5 79402006 79402032 -120228118 + AT_rich Low_complexity Low_complexity 1 26 0 845 156 7 44 chr5 79402032 79402167 -120227983 - FLAM_C SINE Alu -3 130 1 313 132 0 19 chr5 79402177 79402230 -120227920 + MLT1I LTR MaLR 342 393 -16 287 235 15 0 chr5 79402302 79402370 -120227780 - MER116 DNA Mariner 0 80 12 237 319 42 25 chr5 79402407 79402526 -120227624 - MIR3 SINE MIR -26 182 62 344 295 43 84 chr5 79402556 79402596 -120227554 + L1MC4a LINE L1 5567 5607 -514 1665 163 14 20 chr5 79402596 79402891 -120227259 + AluJb SINE Alu 1 293 -19 344 295 43 84 chr5 79402891 79403209 -120226941 + L1MC4a LINE L1 5607 5790 -331 403 253 135 56 chr5 79403352 79403445 -120226705 + MIR SINE MIR 49 133 -129 2150 114 0 0 chr5 79403445 79403757 -120226393 + AluSg SINE Alu 3 314 0 403 253 135 56 chr5 79403757 79403859 -120226291 + MIR SINE MIR 133 261 -1 301 363 9 0 chr5 79404719 79404832 -120225318 - MIR SINE MIR -79 129 16 362 100 17 0 chr5 79405742 79405802 -120224348 + (TGGGGG)n Simple_repeat Simple_repeat 4 64 0 312 91 0 0 chr5 79405856 79405900 -120224250 + (CA)n Simple_repeat Simple_repeat 2 45 0 433 143 71 0 chr5 79406267 79406365 -120223785 + FLAM_C SINE Alu 3 107 -36 1275 247 53 53 chr5 79406996 79407516 -120222634 + MLT1E1 LTR MaLR 14 654 0 2573 212 67 51 chr5 79408132 79408854 -120221296 + MER44D DNA MER2_type 1 605 0 228 216 32 24 chr5 79409022 79409147 -120221003 + GA-rich Low_complexity Low_complexity 5 130 0 255 215 0 0 chr5 79410220 79410285 -120219865 + (TA)n Simple_repeat Simple_repeat 2 66 0 1040 267 79 42 chr5 79410338 79410769 -120219381 - L2 LINE L2 0 3313 2867 * 1602 289 53 30 chr5 79410765 79411464 -120218686 - L2 LINE L2 -559 2755 2041 184 239 22 0 chr5 79412431 79412477 -120217673 - L2 LINE L2 -116 3156 3110 233 301 237 0 chr5 79414221 79414314 -120215836 + L2 LINE L2 3199 3313 0 426 293 0 8 chr5 79414618 79414741 -120215409 - L2 LINE L2 -6 3307 3186 625 242 18 24 chr5 79414940 79415105 -120215045 + LTR33 LTR ERVL 1 164 -357 347 221 100 50 chr5 79415133 79415273 -120214877 + LTR33 LTR ERVL 305 451 -70 6050 150 5 1 chr5 79415973 79417279 -120212871 - L1PB1 LINE L1 -8 6143 4833 407 230 0 0 chr5 79417282 79417369 -120212781 - L1M4c LINE L1 -1217 5740 5654 3653 195 58 32 chr5 79417369 79418316 -120211834 - L1M4c LINE L1 -1679 5278 4307 363 171 0 24 chr5 79418321 79418403 -120211747 - L1MA2 LINE L1 0 6304 6225 1639 179 34 0 chr5 79418413 79418704 -120211446 - AluJb SINE Alu -11 301 1 4474 243 63 49 chr5 79419580 79420912 -120209238 - L1M4c LINE L1 -2678 4279 2967 2291 109 0 3 chr5 79420912 79421224 -120208926 - AluY SINE Alu 0 311 1 4474 243 63 49 chr5 79421224 79421378 -120208772 - L1M4c LINE L1 -3990 2967 2817 2220 114 62 14 chr5 79421378 79421736 -120208414 + THE1C LTR MaLR 1 375 0 4474 243 63 49 chr5 79421736 79421798 -120208352 - L1M4c LINE L1 -4140 2817 2757 194 0 0 37 chr5 79421798 79421825 -120208325 + (TCTA)n Simple_repeat Simple_repeat 3 28 0 4474 243 63 49 chr5 79421825 79422523 -120207627 - L1M4c LINE L1 -4200 2757 2029 478 191 36 0 chr5 79422626 79422736 -120207414 + L1ME3 LINE L1 3606 3719 -2427 847 243 75 47 chr5 79423272 79424298 -120205852 + L1ME3 LINE L1 3719 4714 -1456 2699 204 63 8 chr5 79424298 79424915 -120205235 - MER82 DNA MER2_type 0 653 3 847 243 75 47 chr5 79424915 79425489 -120204661 + L1ME3 LINE L1 4714 5270 -900 1807 159 14 113 chr5 79425489 79425922 -120204228 - MLT1B LTR MaLR 0 390 1 847 243 75 47 chr5 79425922 79426514 -120203636 + L1ME3 LINE L1 5270 6102 -68 2348 81 0 3 chr5 79426517 79426813 -120203337 + AluSc SINE Alu 1 295 -14 1614 205 3 3 chr5 79426928 79427252 -120202898 + AluJb SINE Alu 1 324 0 545 121 52 17 chr5 79427266 79427382 -120202768 - L1MB8 LINE L1 -10 6168 6049 1668 200 34 47 chr5 79427555 79427814 -120202336 - L1M4c LINE L1 -5044 1811 1550 2011 102 85 0 chr5 79427814 79428097 -120202053 - AluSq SINE Alu -6 307 1 1668 200 34 47 chr5 79428097 79428433 -120201717 - L1M4c LINE L1 -5305 1550 1223 1832 197 29 48 chr5 79428514 79428930 -120201220 + MER47B DNA MER2_type 11 418 0 298 211 0 53 chr5 79428930 79429006 -120201144 - L1M4c LINE L1 -5891 968 897 470 296 119 17 chr5 79429007 79429368 -120200782 - L1MB8 LINE L1 -2096 5712 5315 298 262 61 79 chr5 79429832 79429996 -120200154 - L2 LINE L2 -853 2461 2301 2207 102 0 0 chr5 79432372 79432689 -120197461 - AluSx SINE Alu 0 317 1 768 59 0 0 chr5 79433332 79433433 -120196717 + L1PA8 LINE L1 6070 6170 -2 189 0 0 0 chr5 79433436 79433457 -120196693 + (GA)n Simple_repeat Simple_repeat 2 22 0 279 310 177 0 chr5 79434358 79434471 -120195679 + MIR SINE MIR 22 154 -108 21 82 0 0 chr5 79436343 79436392 -120193758 + AT_rich Low_complexity Low_complexity 1 49 0 188 312 72 64 chr5 79438885 79439010 -120191140 - MER5A DNA MER1_type -38 151 26 189 0 0 0 chr5 79439020 79439041 -120191109 + (T)n Simple_repeat Simple_repeat 1 21 0 204 238 32 32 chr5 79440440 79440503 -120189647 + MIR3 SINE MIR 144 206 -2 * 207 377 29 0 chr5 79440498 79440567 -120189583 + MIR SINE MIR 6 76 -186 388 264 47 0 chr5 79440633 79440739 -120189411 + MIR SINE MIR 94 204 -58 322 243 250 26 chr5 79441177 79441329 -120188821 - MER5A DNA MER1_type -3 186 1 465 345 141 20 chr5 79441329 79441833 -120188317 - L2 LINE L2 -681 2633 2069 715 216 0 0 chr5 79441995 79442120 -120188030 - FLAM_C SINE Alu -18 125 1 568 325 84 0 chr5 79442260 79442463 -120187687 - MIR SINE MIR -23 239 20 24 32 0 0 chr5 79442619 79442650 -120187500 + AT_rich Low_complexity Low_complexity 1 31 0 290 276 26 0 chr5 79442738 79442814 -120187336 + L2 LINE L2 3195 3272 0 470 304 109 72 chr5 79443279 79443555 -120186595 - L2 LINE L2 0 3272 2987 219 232 80 0 chr5 79446685 79446823 -120183327 + (TA)n Simple_repeat Simple_repeat 2 150 0 1489 175 124 26 chr5 79446940 79447288 -120182862 - MER63B DNA MER1_type -54 382 1 29 28 0 0 chr5 79448188 79448224 -120181926 + AT_rich Low_complexity Low_complexity 1 36 0 210 37 0 0 chr5 79448270 79448297 -120181853 + (T)n Simple_repeat Simple_repeat 1 27 0 1177 256 112 44 chr5 79448417 79449342 -120180808 - L1ME3A LINE L1 -203 5967 4957 1387 235 87 10 chr5 79449342 79449733 -120180417 + LTR52 LTR ERVL 1 421 0 1109 155 6 6 chr5 79449797 79449978 -120180172 + AluSg/x SINE Alu 114 294 -18 2280 104 3 3 chr5 79449987 79450296 -120179854 + AluSx SINE Alu 1 309 -3 962 235 113 14 chr5 79450313 79450755 -120179395 - L1ME3A LINE L1 -1276 4870 4385 1820 160 3 7 chr5 79450782 79451075 -120179075 + AluJo SINE Alu 1 292 -20 1355 198 29 29 chr5 79451088 79451290 -120178860 - L1MD2 LINE L1 -27 6332 6128 1495 170 121 0 chr5 79451290 79451555 -120178595 - AluJb SINE Alu -15 297 1 1355 198 29 29 chr5 79451555 79451666 -120178484 - L1MD2 LINE L1 -230 6129 6019 330 133 100 0 chr5 79451668 79451728 -120178422 - MLT1A1 LTR MaLR 0 374 309 36 40 0 0 chr5 79451732 79451782 -120178368 + AT_rich Low_complexity Low_complexity 1 50 0 1776 186 19 6 chr5 79451782 79452093 -120178057 - MLT1A1 LTR MaLR -50 315 1 3228 211 59 26 chr5 79452094 79452849 -120177301 - L1MD1 LINE L1 -225 6017 5289 1235 191 15 111 chr5 79452849 79453253 -120176897 + MLT1A1 LTR MaLR 1 365 0 3228 211 59 26 chr5 79453253 79454178 -120175972 - L1MD1 LINE L1 -953 5289 4299 2151 95 0 3 chr5 79454326 79454689 -120175461 - AluSx SINE Alu 0 364 3 2123 133 0 0 chr5 79454691 79454991 -120175159 - AluSx SINE Alu -12 300 1 202 139 0 23 chr5 79455124 79455167 -120174983 + (TTTTA)n Simple_repeat Simple_repeat 5 46 0 5170 175 42 14 chr5 79455169 79457091 -120173059 - L1PA16 LINE L1 -9 6157 4180 10304 165 9 8 chr5 79457102 79460105 -120170045 - L1PB1 LINE L1 -7 6860 3860 9228 144 35 2 chr5 79461035 79463455 -120166695 - L1PB1 LINE L1 -2972 3890 1392 793 239 14 10 chr5 79463432 79463641 -120166509 - L1PB1 LINE L1 -6647 216 7 * 513 107 24 0 chr5 79463642 79463726 -120166424 - L1 LINE L1 -1951 4195 4110 6579 86 9 0 chr5 79463930 79464594 -120165556 - L1PA11 LINE L1 -2 6172 5518 2338 111 0 0 chr5 79464594 79464901 -120165249 + AluSx SINE Alu 2 308 -4 6579 86 9 0 chr5 79464901 79465237 -120164913 - L1PA11 LINE L1 -656 5518 5187 381 131 0 0 chr5 79465601 79465662 -120164488 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 1254 140 10 14 chr5 79465665 79465872 -120164278 - AluJb SINE Alu -14 298 93 494 204 238 14 chr5 79466666 79466813 -120163337 - MIR SINE MIR -82 180 1 500 248 147 19 chr5 79466859 79467016 -120163134 + MER5A DNA MER1_type 10 186 -3 1531 204 79 20 chr5 79467134 79467487 -120162663 + MLT1A2 LTR MaLR 1 374 0 2440 110 11 14 chr5 79467720 79468083 -120162067 + L1PA16 LINE L1 5795 6156 -10 1601 181 9 26 chr5 79468095 79468437 -120161713 + L1PB4 LINE L1 5813 6148 -8 2391 226 25 28 chr5 79468586 79469157 -120160993 + MER74B LTR ERVL 48 616 -6 1884 168 42 3 chr5 79469501 79469835 -120160315 - MER7A DNA MER2_type -1 345 1 375 328 30 30 chr5 79470033 79470167 -120159983 + L2 LINE L2 3137 3270 -2 264 265 128 10 chr5 79471538 79471640 -120158510 + L2 LINE L2 3151 3264 -8 2113 113 7 0 chr5 79471663 79471947 -120158203 + AluSx SINE Alu 12 297 -15 379 269 84 54 chr5 79473049 79473365 -120156785 - L1M1 LINE L1 -511 5791 5470 379 225 115 50 chr5 79473374 79473556 -120156594 - L1ME3A LINE L1 -15 6155 5962 1389 264 58 24 chr5 79473639 79474102 -120156048 - L1ME3A LINE L1 -214 5956 5478 4495 163 56 13 chr5 79474252 79475469 -120154681 - L1MB5 LINE L1 0 6174 4905 2413 213 135 9 chr5 79475635 79476317 -120153833 - L1ME2 LINE L1 -10 6154 5387 5440 269 74 27 chr5 79476450 79479248 -120150902 - L1ME2 LINE L1 -1088 5058 2131 555 244 54 60 chr5 79479951 79480300 -120149850 + L1MC5 LINE L1 7564 7910 -51 284 284 58 52 chr5 79480473 79480628 -120149522 + MIR3 SINE MIR 30 185 -23 262 297 81 18 chr5 79480947 79481058 -120149092 + L2 LINE L2 3185 3302 -11 183 80 0 0 chr5 79481059 79481084 -120149066 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 1806 167 0 14 chr5 79481789 79482083 -120148067 - AluJo SINE Alu -22 290 1 2208 88 35 0 chr5 79483072 79483357 -120146793 - AluSx SINE Alu -17 295 1 2218 123 0 0 chr5 79483729 79484029 -120146121 - AluSc SINE Alu -9 300 1 924 225 22 79 chr5 79484473 79484829 -120145321 - MER46C DNA MER2_type -1 337 2 2192 106 12 26 chr5 79484945 79485286 -120144864 + MER1B DNA MER1_type 2 337 0 285 301 37 52 chr5 79485917 79486053 -120144097 + MIR SINE MIR 82 215 -47 34 24 0 0 chr5 79486467 79486508 -120143642 + AT_rich Low_complexity Low_complexity 1 41 0 26 0 0 0 chr5 79486711 79486737 -120143413 + AT_rich Low_complexity Low_complexity 1 26 0 225 0 0 0 chr5 79488730 79488755 -120141395 + (TA)n Simple_repeat Simple_repeat 2 26 0 261 0 0 0 chr5 79488981 79489010 -120141140 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 762 274 94 74 chr5 79489132 79489341 -120140809 + MLT1J LTR MaLR 1 204 -307 2234 110 3 3 chr5 79489341 79489650 -120140500 - AluSc SINE Alu 0 309 1 762 274 94 74 chr5 79489650 79489941 -120140209 + MLT1J LTR MaLR 204 511 0 29 0 0 0 chr5 79489995 79490024 -120140126 + AT_rich Low_complexity Low_complexity 1 29 0 643 265 135 33 chr5 79490115 79490537 -120139613 + L1ME4a LINE L1 5358 5822 -299 6744 126 64 10 chr5 79490625 79491770 -120138380 + Tigger3b DNA MER2_type 24 1230 -1 300 357 48 97 chr5 79491784 79492053 -120138097 - L2 LINE L2 -25 3247 2992 227 268 207 18 chr5 79492084 79492248 -120137902 + L1ME4a LINE L1 5843 6037 -84 2266 88 14 3 chr5 79493620 79493917 -120136233 - AluSc SINE Alu -9 300 1 423 38 0 0 chr5 79493982 79494035 -120136115 + (CA)n Simple_repeat Simple_repeat 1 53 0 183 42 0 0 chr5 79494035 79494059 -120136091 + (TC)n Simple_repeat Simple_repeat 1 24 0 762 201 55 6 chr5 79494086 79494250 -120135900 + MER5B DNA MER1_type 7 178 0 28 29 0 0 chr5 79495294 79495329 -120134821 + AT_rich Low_complexity Low_complexity 1 35 0 2112 104 52 0 chr5 79495330 79495619 -120134531 + AluSx SINE Alu 1 304 -8 484 312 0 13 chr5 79495621 79495778 -120134372 + MIR SINE MIR 29 183 -79 575 249 149 37 chr5 79495827 79495961 -120134189 + MLT1L LTR MaLR 1 119 -496 2382 104 19 25 chr5 79495961 79496327 -120133823 + THE1B LTR MaLR 1 364 0 575 249 149 37 chr5 79496327 79496433 -120133717 + MLT1L LTR MaLR 119 268 -347 2414 188 62 2 chr5 79496521 79497038 -120133112 - L1MB8 LINE L1 -9 6169 5622 632 222 37 19 chr5 79497050 79497212 -120132938 + HAL1 LINE L1 1764 1928 -579 3202 173 94 25 chr5 79497249 79497971 -120132179 + L1M4b LINE L1 275 1046 -5238 1515 178 33 11 chr5 79497972 79498248 -120131902 + AluJb SINE Alu 1 282 -30 816 261 35 16 chr5 79498250 79498551 -120131599 + L1M4b LINE L1 1044 1304 -4976 535 181 112 14 chr5 79498682 79498845 -120131305 + L1M4b LINE L1 1265 1751 -4552 296 190 52 170 chr5 79498846 79499210 -120130940 + HAL1 LINE L1 2074 2394 -113 502 216 0 0 chr5 79499258 79499374 -120130776 - L1MB2 LINE L1 -2 6169 6054 37926 83 9 9 chr5 79499512 79505660 -120124490 - L1PA6 LINE L1 -2 6152 4 1066 266 17 6 chr5 79505840 79506194 -120123956 - L1MDb LINE L1 -2615 3791 3434 * 1250 255 23 49 chr5 79506174 79506700 -120123450 - L1MDb LINE L1 -5114 1295 784 1577 194 61 38 chr5 79507490 79507714 -120122436 - L1M4 LINE L1 -852 5294 5076 1885 183 0 0 chr5 79507714 79508026 -120122124 - AluJo SINE Alu 0 312 1 1577 194 61 38 chr5 79508026 79508296 -120121854 - L1M4 LINE L1 -1070 5076 4789 12449 204 32 8 chr5 79508297 79512593 -120117557 - L1MB4 LINE L1 -2 6880 2476 625 251 17 11 chr5 79513343 79513518 -120116632 - MER5B DNA MER1_type 0 178 3 444 213 253 13 chr5 79513634 79513784 -120116366 + MIR SINE MIR 69 254 -8 344 275 132 93 chr5 79514215 79514593 -120115557 - L1MB4 LINE L1 -5827 1022 630 3566 25 23 5 chr5 79515116 79515556 -120114594 - LTR7 LTR ERV1 -2 448 1 1081 159 6 11 chr5 79516120 79516302 -120113848 + MER20 DNA MER1_type 1 181 -38 1212 97 0 0 chr5 79516302 79516456 -120113694 + AluSx SINE Alu 1 154 -158 235 283 0 0 chr5 79516527 79516580 -120113570 - L2 LINE L2 0 3272 3220 228 160 93 27 chr5 79516678 79516753 -120113397 - L1MB7 LINE L1 0 6184 6105 207 170 0 0 chr5 79516939 79516986 -120113164 + T-rich Low_complexity Low_complexity 1 47 0 519 317 40 5 chr5 79517690 79517892 -120112258 + L2 LINE L2 3105 3313 0 33 0 0 0 chr5 79518099 79518132 -120112018 + AT_rich Low_complexity Low_complexity 1 33 0 762 144 0 0 chr5 79518132 79518250 -120111900 - FLAM_C SINE Alu -15 118 1 1151 276 81 84 chr5 79518299 79518992 -120111158 - MER21B LTR ERV1 -149 714 24 910 219 131 77 chr5 79519657 79520178 -120109972 - MLT1H LTR MaLR 0 549 1 537 296 78 35 chr5 79521345 79521602 -120108548 - LTR16A LTR ERVL -10 440 173 272 327 19 9 chr5 79521650 79521757 -120108393 - LTR16B LTR ERVL -323 141 34 1062 163 63 67 chr5 79522620 79522920 -120107230 + L1MC5 LINE L1 6891 7189 -772 745 214 132 94 chr5 79522990 79523040 -120107110 - MER34B LTR ERV1 -66 499 452 312 27 0 0 chr5 79523040 79523077 -120107073 + (CA)n Simple_repeat Simple_repeat 1 37 0 745 214 132 94 chr5 79523077 79523120 -120107030 - MER34B LTR ERV1 -113 452 412 1775 162 17 7 chr5 79523120 79523416 -120106734 + AluJb SINE Alu 1 299 -13 745 214 132 94 chr5 79523416 79523816 -120106334 - MER34B LTR ERV1 -153 412 10 1724 212 126 26 chr5 79523891 79524496 -120105654 + L1MC5 LINE L1 7253 7917 -44 2377 93 0 0 chr5 79524746 79525047 -120105103 - AluSg SINE Alu -9 301 1 1910 133 43 0 chr5 79525244 79525523 -120104627 + AluSg SINE Alu 1 291 -19 42140 36 24 2 chr5 79525713 79531731 -120098419 - L1PA3 LINE L1 0 6155 1 32203 40 4 5 chr5 79532086 79536870 -120093280 - L1PA4 LINE L1 -2 6153 1377 818 228 35 54 chr5 79536898 79537157 -120092993 + L1MC5 LINE L1 7186 7439 -522 3221 43 0 3 chr5 79537164 79537555 -120092595 - L1PA5 LINE L1 -28 6126 5737 486 212 8 8 chr5 79537564 79537682 -120092468 + L1MC5 LINE L1 7448 7565 -396 341 110 41 41 chr5 79538509 79538582 -120091568 - Alu SINE Alu 0 301 229 181 261 0 0 chr5 79538826 79538872 -120091278 - L2 LINE L2 0 3313 3268 678 167 80 6 chr5 79538949 79539111 -120091039 + MER104 DNA Tc2 7 180 0 1621 129 125 11 chr5 79541991 79542263 -120087887 + AluSg SINE Alu 1 303 -7 30 77 0 0 chr5 79543036 79543101 -120087049 + AT_rich Low_complexity Low_complexity 1 65 0 28 48 0 0 chr5 79543917 79543959 -120086191 + AT_rich Low_complexity Low_complexity 1 42 0 876 194 69 60 chr5 79544014 79544107 -120086043 - MIR SINE MIR -21 241 150 2308 102 3 0 chr5 79544107 79544412 -120085738 - AluSq SINE Alu -7 306 1 876 194 69 60 chr5 79544412 79544550 -120085600 - MIR SINE MIR -112 150 8 2143 109 7 7 chr5 79544690 79544983 -120085167 - AluSg SINE Alu -15 295 3 243 88 0 0 chr5 79545216 79545250 -120084900 + (CATA)n Simple_repeat Simple_repeat 2 35 0 2302 111 49 0 chr5 79545645 79545989 -120084161 + MER46B DNA MER2_type 1 236 0 2180 163 21 38 chr5 79546267 79546691 -120083459 + MER47B DNA MER2_type 2 418 0 284 274 12 0 chr5 79546796 79546880 -120083270 - MER112 DNA MER1_type -175 85 1 546 271 142 18 chr5 79548865 79549204 -120080946 + L1ME4a LINE L1 5494 5874 -247 5930 176 53 79 chr5 79549223 79549539 -120080611 + L1MB8 LINE L1 3733 4056 -2122 1898 163 10 16 chr5 79549539 79549845 -120080305 + AluJo SINE Alu 1 304 -8 5930 176 53 79 chr5 79549845 79550236 -120079914 + L1MB8 LINE L1 4056 4456 -1722 750 180 0 0 chr5 79550236 79550358 -120079792 + FLAM_C SINE Alu 3 124 -19 5930 176 53 79 chr5 79550358 79551705 -120078445 + L1MB8 LINE L1 4456 5832 -346 2107 191 127 8 chr5 79552056 79552559 -120077591 - MLT1F1 LTR MaLR 0 567 5 199 281 254 9 chr5 79555882 79555996 -120074154 + L2 LINE L2 3123 3264 -8 246 27 54 0 chr5 79557638 79557675 -120072475 + (TTTG)n Simple_repeat Simple_repeat 2 180 0 2110 117 0 0 chr5 79557675 79557956 -120072194 - AluSg SINE Alu -1 317 1 16144 99 16 4 chr5 79558656 79561644 -120068506 - L1PA8A LINE L1 -12 6119 3101 2169 129 10 0 chr5 79562364 79562666 -120067484 + AluSx SINE Alu 1 305 -7 270 375 39 0 chr5 79563381 79563485 -120066665 - MIR SINE MIR -63 145 38 22 56 0 0 chr5 79563513 79563549 -120066601 + AT_rich Low_complexity Low_complexity 1 36 0 2599 51 0 10 chr5 79563637 79563951 -120066199 - AluY SINE Alu 0 311 1 22 35 0 0 chr5 79564024 79564053 -120066097 + AT_rich Low_complexity Low_complexity 1 29 0 686 287 118 43 chr5 79564154 79564797 -120065353 - L1ME4a LINE L1 -247 5874 5280 234 62 0 0 chr5 79564797 79564829 -120065321 + (TG)n Simple_repeat Simple_repeat 2 33 0 2034 94 4 0 chr5 79564832 79565088 -120065062 - AluSx SINE Alu -31 281 25 686 287 118 43 chr5 79565088 79565487 -120064663 - L1ME4a LINE L1 -842 5279 4743 27 62 0 0 chr5 79566756 79566804 -120063346 + AT_rich Low_complexity Low_complexity 1 48 0 251 213 95 16 chr5 79566960 79567048 -120063102 + MIR SINE MIR 50 145 -63 271 342 124 15 chr5 79567436 79567628 -120062522 + MIR SINE MIR 7 212 -50 359 236 45 73 chr5 79571054 79571164 -120058986 - L2 LINE L2 -21 3292 3186 1498 110 38 0 chr5 79571899 79572108 -120058042 - AluSg/x SINE Alu -13 299 83 195 287 56 19 chr5 79572124 79572232 -120057918 + L2 LINE L2 1521 1632 -1682 1831 124 73 4 chr5 79572290 79572565 -120057585 - AluSq SINE Alu -19 294 1 271 189 67 56 chr5 79574571 79574661 -120055489 - MIR3 SINE MIR -22 186 96 8257 140 96 12 chr5 79575065 79577201 -120052949 - Tigger1 DNA MER2_type 0 2418 1 26 0 0 0 chr5 79577530 79577556 -120052594 + AT_rich Low_complexity Low_complexity 1 26 0 30 59 0 0 chr5 79579172 79579223 -120050927 + AT_rich Low_complexity Low_complexity 1 51 0 195 253 115 35 chr5 79580923 79581010 -120049140 - MIR SINE MIR -79 183 90 1987 139 28 0 chr5 79581059 79581346 -120048804 - AluSx SINE Alu -17 295 1 656 190 63 42 chr5 79581493 79581635 -120048515 + Charlie1 DNA MER1_type 1429 1573 -1188 870 208 11 28 chr5 79581636 79581814 -120048336 + FRAM SINE Alu 1 175 -1 1284 171 54 39 chr5 79581815 79582095 -120048055 + Charlie1 DNA MER1_type 1561 1844 -917 4823 124 29 31 chr5 79582623 79582689 -120047461 + L1PA16 LINE L1 5334 5399 -767 2068 123 20 3 chr5 79582689 79582991 -120047159 + AluSx SINE Alu 1 307 -5 4823 124 29 31 chr5 79582991 79583739 -120046411 + L1PA16 LINE L1 5399 6147 -19 242 387 27 9 chr5 79589123 79589234 -120040916 - L2 LINE L2 -19 3253 3141 735 264 126 0 chr5 79589343 79589525 -120040625 + MER3 DNA MER1_type 1 205 -4 430 272 55 51 chr5 79589545 79589762 -120040388 - L2 LINE L2 -229 3043 2826 2365 104 0 3 chr5 79590955 79591262 -120038888 + AluSx SINE Alu 1 306 -6 2159 104 0 44 chr5 79591884 79592200 -120037950 + AluY SINE Alu 1 302 -9 796 11 0 0 chr5 79595682 79595771 -120034379 + L1PA4 LINE L1 6064 6152 -3 2578 167 57 7 chr5 79596096 79596551 -120033599 + MER66A LTR ERV1 1 478 0 207 200 89 0 chr5 79597164 79597209 -120032941 - MIR SINE MIR -57 151 103 991 282 93 93 chr5 79597861 79599086 -120031064 + L2 LINE L2 1987 3216 -97 2119 104 34 0 chr5 79600315 79600613 -120029537 - AluSp SINE Alu -5 308 1 275 310 108 29 chr5 79600806 79601122 -120029028 + L2 LINE L2 1917 2257 -1057 29 0 0 0 chr5 79601643 79601672 -120028478 + AT_rich Low_complexity Low_complexity 1 29 0 2157 93 3 43 chr5 79602190 79602332 -120027818 + AluSp SINE Alu 1 147 -166 2110 110 7 13 chr5 79602332 79602632 -120027518 + AluSg SINE Alu 1 298 -12 2157 93 3 43 chr5 79602632 79602811 -120027339 + AluSp SINE Alu 147 309 -4 26 30 0 0 chr5 79603000 79603033 -120027117 + AT_rich Low_complexity Low_complexity 1 33 0 1061 286 4 0 chr5 79603727 79603979 -120026171 + MIR SINE MIR 8 260 -2 24 67 0 0 chr5 79604132 79604177 -120025973 + AT_rich Low_complexity Low_complexity 1 45 0 23 54 0 0 chr5 79604344 79604381 -120025769 + AT_rich Low_complexity Low_complexity 1 37 0 590 278 33 6 chr5 79604956 79605136 -120025014 - MIR SINE MIR -12 250 66 195 259 37 56 chr5 79605186 79605240 -120024910 - L2 LINE L2 -19 3253 3201 311 254 119 17 chr5 79605451 79605569 -120024581 - MIR SINE MIR -34 228 99 270 339 94 0 chr5 79605781 79605908 -120024242 - MIR3 SINE MIR -40 168 30 2389 138 41 36 chr5 79607271 79607712 -120022438 + LTR47A LTR ERVL 1 443 -9 256 307 184 0 chr5 79607734 79607848 -120022302 + LTR57-int LTR ERVL 15 149 -5194 2242 107 7 3 chr5 79607996 79608304 -120021846 + AluSx SINE Alu 1 309 -3 493 201 83 35 chr5 79608339 79608483 -120021667 + MER4B-int LTR ERV1 2136 2286 -2594 * 976 252 87 73 chr5 79608458 79608883 -120021267 + MER4B-int LTR ERV1 1851 2281 -4050 310 116 42 189 chr5 79608881 79608976 -120021174 + MER4B-int LTR ERV1 2646 2726 -3220 * 8657 175 97 101 chr5 79609020 79609287 -120020863 + MER4B-int LTR ERV1 1181 1447 -4881 2180 129 10 0 chr5 79609287 79609590 -120020560 + AluSx SINE Alu 1 306 -6 8657 175 97 101 chr5 79609590 79611202 -120018948 + MER4B-int LTR ERV1 1447 3063 -3265 2486 55 3 0 chr5 79611202 79611492 -120018658 + AluY SINE Alu 1 291 -20 8657 175 97 101 chr5 79611492 79613198 -120016952 + MER4B-int LTR ERV1 3063 5628 -700 2034 133 7 3 chr5 79613198 79613498 -120016652 - AluSx SINE Alu -2 310 10 8657 175 97 101 chr5 79613498 79613940 -120016210 + MER4B-int LTR ERV1 5628 6070 -258 2510 143 74 0 chr5 79613947 79614368 -120015782 + LTR47A LTR ERVL 1 452 0 200 57 0 29 chr5 79614824 79614859 -120015291 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 343 228 55 47 chr5 79615690 79615817 -120014333 - MIR SINE MIR -114 148 21 1920 208 147 34 chr5 79616489 79617076 -120013074 + L1ME2 LINE L1 5448 6100 -64 32762 95 14 71 chr5 79617089 79619481 -120010669 + L1PA7 LINE L1 9 2537 -3617 2582 4 0 0 chr5 79619481 79619754 -120010396 + AluYb8 SINE Alu 45 317 -1 32762 95 14 71 chr5 79619754 79620532 -120009618 + L1PA7 LINE L1 2537 3358 -2796 2137 117 31 0 chr5 79620532 79620823 -120009327 + AluSg SINE Alu 1 300 -10 32762 95 14 71 chr5 79620823 79624183 -120005967 + L1PA7 LINE L1 3358 6152 -2 225 266 0 16 chr5 79624185 79624249 -120005901 + L1ME3 LINE L1 6091 6153 -9 26 0 0 0 chr5 79624790 79624816 -120005334 + AT_rich Low_complexity Low_complexity 1 26 0 24 53 0 0 chr5 79624983 79625021 -120005129 + AT_rich Low_complexity Low_complexity 1 38 0 434 268 150 60 chr5 79625235 79625962 -120004188 + L2 LINE L2 2454 3240 -32 769 177 43 0 chr5 79627740 79627904 -120002246 - MER5A DNA MER1_type -2 187 17 360 271 179 0 chr5 79627929 79628080 -120002070 + MER5A DNA MER1_type 10 187 -2 2343 87 0 0 chr5 79628224 79628510 -120001640 - AluSc SINE Alu -23 286 1 261 306 40 8 chr5 79628518 79628602 -120001548 + MIR SINE MIR 71 162 -100 1541 182 115 95 chr5 79628602 79628638 -120001512 - MLT2B2 LTR ERVL 0 515 481 360 0 0 0 chr5 79628638 79628678 -120001472 + (TG)n Simple_repeat Simple_repeat 2 41 0 1541 182 115 95 chr5 79628678 79629146 -120001004 - MLT2B2 LTR ERVL -34 481 1 261 306 40 8 chr5 79629146 79629185 -120000965 + MIR SINE MIR 162 198 -64 700 224 33 3 chr5 79629192 79629372 -120000778 - MER5A DNA MER1_type -2 176 3 405 278 28 0 chr5 79630225 79630333 -119999817 - L2 LINE L2 -2 3311 3201 1535 112 5 0 chr5 79630593 79630808 -119999342 + AluSp SINE Alu 97 312 -1 180 0 0 0 chr5 79631716 79631736 -119998414 + (TG)n Simple_repeat Simple_repeat 2 21 0 1370 268 98 16 chr5 79631913 79632546 -119997604 + L1ME2 LINE L1 1791 2484 -3912 2238 94 7 3 chr5 79632546 79632843 -119997307 + AluSp SINE Alu 1 298 -15 1370 268 98 16 chr5 79632843 79632885 -119997265 + L1ME2 LINE L1 2484 2521 -3875 552 238 65 67 chr5 79632896 79632936 -119997214 + L1ME2 LINE L1 5786 5825 -341 511 114 0 0 chr5 79632936 79633015 -119997135 + L1MB8 LINE L1 6098 6176 -2 552 238 65 67 chr5 79633015 79633219 -119996931 + L1ME2 LINE L1 5825 6017 -149 789 194 0 31 chr5 79633220 79633380 -119996770 + L1MA10 LINE L1 6178 6332 -2 1801 251 29 39 chr5 79633386 79633650 -119996500 + L1ME2 LINE L1 3120 3385 -2830 1985 117 57 3 chr5 79633650 79633932 -119996218 - AluSg SINE Alu -13 297 1 1801 251 29 39 chr5 79633932 79634356 -119995794 + L1ME2 LINE L1 3385 3801 -2414 3932 210 56 20 chr5 79634356 79634464 -119995686 + L1ME2 LINE L1 4285 4388 -1845 2069 135 3 0 chr5 79634464 79634775 -119995375 - AluSx SINE Alu 0 313 2 3932 210 56 20 chr5 79634775 79636542 -119993608 + L1ME2 LINE L1 4388 6229 -4 383 252 36 63 chr5 79636565 79636787 -119993363 + L1MC4 LINE L1 7826 8041 -1 354 257 166 17 chr5 79636978 79637153 -119992997 + MIR SINE MIR 60 260 -2 2415 94 0 3 chr5 79637466 79637774 -119992376 - AluSx SINE Alu -5 307 1 2471 85 7 0 chr5 79638866 79639173 -119990977 + AluSc SINE Alu 1 309 0 315 0 0 0 chr5 79639505 79639540 -119990610 + (TG)n Simple_repeat Simple_repeat 2 36 0 275 285 41 49 chr5 79640834 79640957 -119989193 - L2 LINE L2 -27 3245 3124 194 265 184 10 chr5 79641111 79641209 -119988941 - L2 LINE L2 -4 3268 3154 546 238 41 7 chr5 79641424 79641571 -119988579 + MER5B DNA MER1_type 26 177 -1 2302 106 0 0 chr5 79642987 79643288 -119986862 - AluSg SINE Alu -9 301 1 579 278 21 16 chr5 79643436 79643627 -119986523 + MIR SINE MIR 43 234 -28 218 329 84 7 chr5 79643898 79644041 -119986109 - L2 LINE L2 -283 2989 2836 299 239 109 0 chr5 79644141 79644233 -119985917 + MER63 DNA MER1_type 1 102 -828 747 206 50 11 chr5 79644334 79644514 -119985636 + MER63 DNA MER1_type 860 1046 -15 * 839 161 81 35 chr5 79644512 79644686 -119985464 + MER58A DNA MER1_type 42 223 -1 * 3686 218 17 17 chr5 79644686 79644906 -119985244 + MER63C DNA MER1_type 94 313 -747 2449 81 0 0 chr5 79644906 79645203 -119984947 + AluY SINE Alu 1 297 -14 3686 218 17 17 chr5 79645203 79645814 -119984336 + MER63C DNA MER1_type 312 925 -5 2239 108 17 0 chr5 79646601 79646898 -119983252 - AluSg SINE Alu -7 303 2 810 224 138 10 chr5 79650266 79650462 -119979688 - MER58A DNA MER1_type -2 222 2 357 222 44 0 chr5 79653755 79653845 -119976305 - MIR SINE MIR -77 185 92 1717 171 3 18 chr5 79655523 79655809 -119974341 + AluJo SINE Alu 1 282 -30 298 291 102 51 chr5 79656660 79656914 -119973236 + L2 LINE L2 2916 3182 -90 943 274 18 0 chr5 79657140 79657363 -119972787 + MIR SINE MIR 26 252 -10 230 313 12 0 chr5 79657386 79657485 -119972665 + (TGGA)n Simple_repeat Simple_repeat 1 100 0 345 273 103 49 chr5 79658334 79658557 -119971593 + MIR SINE MIR 1 228 -34 1819 168 31 0 chr5 79659050 79659336 -119970814 + AluSx SINE Alu 1 295 -17 1883 190 21 0 chr5 79659803 79660129 -119970021 + MLT1A1 LTR MaLR 1 333 -32 6737 139 63 14 chr5 79660129 79661302 -119968848 + Tigger3b DNA MER2_type 1 1231 0 577 313 31 5 chr5 79662102 79662317 -119967833 + MIR SINE MIR 36 255 -7 374 256 128 45 chr5 79663711 79663867 -119966283 + MIR3 SINE MIR 12 180 -28 378 0 0 0 chr5 79663897 79663939 -119966211 + (CA)n Simple_repeat Simple_repeat 2 43 0 3063 136 44 58 chr5 79667753 79668342 -119961808 + L1MB5 LINE L1 5594 6174 0 299 65 22 0 chr5 79668975 79669021 -119961129 + (CA)n Simple_repeat Simple_repeat 1 47 0 488 148 12 0 chr5 79669503 79669584 -119960566 + MER103 DNA DNA 24 105 -61 321 286 189 11 chr5 79669759 79669934 -119960216 + MIR SINE MIR 23 228 -34 208 247 62 49 chr5 79669989 79670070 -119960080 + L2 LINE L2 3232 3313 0 21 0 0 0 chr5 79671541 79671562 -119958588 + AT_rich Low_complexity Low_complexity 1 21 0 2364 90 3 0 chr5 79671685 79671984 -119958166 - AluSp SINE Alu -13 300 1 30 27 0 0 chr5 79672251 79672288 -119957862 + AT_rich Low_complexity Low_complexity 1 37 0 1764 170 7 7 chr5 79679073 79679362 -119950788 + AluJb SINE Alu 1 289 -23 321 319 11 0 chr5 79679401 79679495 -119950655 + MIR SINE MIR 5 99 -163 462 318 23 28 chr5 79680032 79680208 -119949942 + L2 LINE L2 3098 3272 0 261 297 123 0 chr5 79680366 79680504 -119949646 + L1ME3A LINE L1 3965 4119 -2027 2210 97 10 13 chr5 79680514 79680823 -119949327 - AluSq SINE Alu -5 308 1 691 234 69 25 chr5 79680844 79681118 -119949032 - L1MC5 LINE L1 -50 7911 7626 462 266 156 43 chr5 79681661 79682057 -119948093 - L2 LINE L2 -112 3201 2783 2839 168 30 8 chr5 79682113 79682638 -119947512 + MER74A LTR ERVL 1 537 -21 22 56 0 0 chr5 79682714 79682750 -119947400 + AT_rich Low_complexity Low_complexity 1 36 0 2441 82 3 7 chr5 79683050 79683354 -119946796 + AluSp SINE Alu 1 303 -10 263 298 97 40 chr5 79683812 79683936 -119946214 - L2 LINE L2 -3 3269 3139 274 240 0 0 chr5 79684182 79684232 -119945918 - Tigger6a DNA MER2_type -2 1081 1032 541 172 139 0 chr5 79684233 79684355 -119945795 + L1PB4 LINE L1 6016 6154 -2 5602 172 24 19 chr5 79684365 79685384 -119944766 - Tigger6a DNA MER2_type -59 1024 1 494 292 102 31 chr5 79685859 79686085 -119944065 - MIR SINE MIR -14 248 7 1797 78 0 0 chr5 79686420 79686637 -119943513 - AluSg/x SINE Alu -8 301 85 279 282 68 29 chr5 79687371 79687474 -119942676 + L2 LINE L2 3162 3268 -4 2190 106 0 0 chr5 79687966 79688248 -119941902 + AluSg SINE Alu 1 282 -28 575 266 87 74 chr5 79688412 79689044 -119941106 + L1ME LINE L1 2128 2767 -3379 1516 209 74 23 chr5 79689052 79689760 -119940390 + L1ME LINE L1 4863 5611 -553 * 2858 184 63 41 chr5 79689756 79690543 -119939607 + L1ME3A LINE L1 4113 5107 -1039 520 254 117 20 chr5 79691740 79691937 -119938213 - MIR SINE MIR -34 228 13 2334 112 0 0 chr5 79692095 79692407 -119937743 + AluSx SINE Alu 1 312 0 316 155 0 35 chr5 79692829 79692887 -119937263 - L2 LINE L2 -4 3309 3254 2488 81 0 3 chr5 79694248 79694555 -119935595 + AluSq SINE Alu 1 306 -7 2107 116 14 0 chr5 79694583 79694868 -119935282 + AluSx SINE Alu 5 293 -19 185 154 26 0 chr5 79695210 79695249 -119934901 + CT-rich Low_complexity Low_complexity 1 40 0 1929 147 6 6 chr5 79695296 79695608 -119934542 - AluSx SINE Alu 0 312 1 12639 106 12 15 chr5 79696329 79698281 -119931869 + L1P LINE L1 3101 5046 -1100 382 257 64 28 chr5 79699623 79699732 -119930418 + MER63 DNA MER1_type 41 779 -283 442 209 97 0 chr5 79699737 79699871 -119930279 - L1M4c LINE L1 -4658 1726 1580 281 262 132 37 chr5 79699910 79700242 -119929908 - L2 LINE L2 -213 3059 2684 338 310 155 46 chr5 79700635 79700919 -119929231 + L2 LINE L2 2957 3271 -1 197 306 0 71 chr5 79700925 79701010 -119929140 - MIR3 SINE MIR -115 93 15 543 218 86 75 chr5 79701989 79702163 -119927987 + MER5B DNA MER1_type 2 177 -1 1056 265 96 51 chr5 79702846 79703469 -119926681 + L1ME3A LINE L1 5254 5904 -266 1747 122 3 97 chr5 79703671 79704015 -119926135 - AluSx SINE Alu 0 316 2 238 368 141 6 chr5 79704403 79704566 -119925584 - MIR SINE MIR -59 203 19 221 0 35 0 chr5 79705356 79705385 -119924765 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 5629 30 2 5 chr5 79706380 79707049 -119923101 + L1PA4 LINE L1 5525 6191 0 264 209 0 60 chr5 79707700 79707767 -119922383 - L3 LINE CR1 -175 1402 1340 432 319 144 40 chr5 79708193 79708588 -119921562 - L2 LINE L2 -10 3262 2827 1045 178 39 0 chr5 79708732 79708912 -119921238 + MER5A DNA MER1_type 3 189 0 1199 214 22 22 chr5 79708961 79709228 -119920922 + MSTD LTR MaLR 1 267 -129 191 273 78 13 chr5 79709240 79709317 -119920833 - L2 LINE L2 -974 2340 2259 249 166 109 15 chr5 79709565 79709652 -119920498 + L1 LINE L1 3859 3959 -2187 1404 194 119 4 chr5 79709747 79710159 -119919991 + AluJb SINE Alu 1 444 0 255 293 17 0 chr5 79710175 79710233 -119919917 + MLT1K LTR MaLR 177 235 -353 * 644 311 74 46 chr5 79710232 79710557 -119919593 + MLT1K LTR MaLR 194 527 -61 626 272 56 65 chr5 79710959 79711532 -119918618 - HAL1b LINE L1 -727 621 54 920 205 154 2 chr5 79712172 79712557 -119917593 + L1MC/D LINE L1 5091 5534 -785 214 188 21 0 chr5 79712602 79712650 -119917500 - L2 LINE L2 -3 3310 3262 293 277 15 0 chr5 79712674 79712739 -119917411 - MIR SINE MIR -180 82 17 227 287 23 11 chr5 79712782 79712869 -119917281 + L1ME LINE L1 4492 4579 -1567 256 362 35 19 chr5 79713164 79713421 -119916729 + L1ME LINE L1 4881 5141 -1005 346 299 65 19 chr5 79713533 79713794 -119916356 + L1ME LINE L1 5275 5547 -617 21 82 0 0 chr5 79714260 79714309 -119915841 + AT_rich Low_complexity Low_complexity 1 49 0 404 272 49 19 chr5 79716562 79716724 -119913426 - MIR3 SINE MIR -15 193 27 189 0 0 0 chr5 79717411 79717432 -119912718 + (A)n Simple_repeat Simple_repeat 1 21 0 390 302 101 0 chr5 79717438 79717577 -119912573 + MIR3 SINE MIR 3 155 -53 216 245 0 0 chr5 79717713 79717762 -119912388 + MIR SINE MIR 81 129 -133 542 304 131 43 chr5 79718394 79719019 -119911131 + L1MEd LINE L1 823 1578 -4732 180 0 0 0 chr5 79719019 79719039 -119911111 + (TAA)n Simple_repeat Simple_repeat 2 21 0 542 304 131 43 chr5 79719039 79719212 -119910938 + L1MEd LINE L1 1578 1734 -4576 299 298 100 35 chr5 79719225 79719594 -119910556 + L1MEd LINE L1 1789 2181 -4129 1498 254 131 34 chr5 79719602 79720189 -119909961 + L1ME3A LINE L1 7 650 -5420 1377 272 96 13 chr5 79720194 79721012 -119909138 + L1ME3A LINE L1 670 1668 -4593 337 262 0 0 chr5 79721045 79721129 -119909021 + L1ME3A LINE L1 4947 5030 -1050 308 274 53 9 chr5 79721165 79721278 -119908872 + MER94 DNA DNA 16 133 -1 1860 239 69 12 chr5 79721287 79721793 -119908357 + L1ME3A LINE L1 5570 6104 0 6282 146 30 25 chr5 79721802 79723118 -119907032 + L1MC1 LINE L1 5006 6328 -5 194 286 43 0 chr5 79724221 79724291 -119905859 + MIR SINE MIR 160 232 -30 2129 199 75 31 chr5 79724471 79724954 -119905196 + MLT1D LTR MaLR 2 505 0 566 244 58 102 chr5 79725310 79725341 -119904809 + MER5C DNA MER1_type 17 48 -276 2294 77 0 11 chr5 79725341 79725658 -119904492 - AluSg SINE Alu 0 314 1 566 244 58 102 chr5 79725658 79725900 -119904250 + MER5C DNA MER1_type 48 279 -45 732 276 61 18 chr5 79726514 79726742 -119903408 + MIR SINE MIR 23 260 -2 2265 60 53 0 chr5 79727518 79727800 -119902350 + AluY SINE Alu 1 297 -14 593 234 79 61 chr5 79729728 79730081 -119900069 - L2 LINE L2 -1 3312 2881 790 182 8 30 chr5 79731061 79731193 -119898957 - FLAM_A SINE Alu -4 129 1 205 138 0 0 chr5 79731348 79731377 -119898773 + (TC)n Simple_repeat Simple_repeat 2 30 0 384 265 0 0 chr5 79731741 79731824 -119898326 + L2 LINE L2 3190 3272 0 647 272 8 14 chr5 79731868 79732071 -119898079 + MIR SINE MIR 4 203 -59 2277 104 7 3 chr5 79732149 79732458 -119897692 + AluSp SINE Alu 1 310 -3 241 319 49 116 chr5 79732531 79732876 -119897274 + L2 LINE L2 2935 3256 -16 303 250 0 0 chr5 79733618 79733678 -119896472 - MIR SINE MIR 0 262 203 198 308 187 56 chr5 79733703 79733901 -119896249 - L2 LINE L2 -158 3114 2891 388 189 111 11 chr5 79734289 79734379 -119895771 - MER5A DNA MER1_type -84 105 7 200 282 209 9 chr5 79734388 79734498 -119895652 + MIR SINE MIR 15 146 -116 235 291 99 71 chr5 79734965 79735106 -119895044 - L2 LINE L2 -158 3114 2970 7364 122 14 4 chr5 79735833 79737471 -119892679 + L1MA3 LINE L1 4125 5779 -526 301 70 23 0 chr5 79737471 79737514 -119892636 - L1M2 LINE L1 -517 5783 5740 338 68 0 0 chr5 79737532 79737576 -119892574 - L1MA3 LINE L1 -521 5783 5740 3559 98 31 14 chr5 79737589 79738098 -119892052 + L1MA3 LINE L1 5788 6305 0 2161 111 0 3 chr5 79738863 79739161 -119890989 - AluY SINE Alu -14 297 1 3234 200 14 37 chr5 79739547 79740216 -119889934 + MER82 DNA MER2_type 1 653 0 3543 153 62 19 chr5 79741851 79742531 -119887619 + L1MB8 LINE L1 5468 6176 -2 1978 125 0 24 chr5 79745427 79745715 -119884435 + AluSx SINE Alu 25 305 -7 2170 107 23 7 chr5 79746110 79746418 -119883732 - AluSq SINE Alu 0 313 1 309 26 0 0 chr5 79747228 79747266 -119882884 + (TG)n Simple_repeat Simple_repeat 2 39 0 428 259 38 94 chr5 79747857 79747987 -119882163 + L2 LINE L2 2777 2892 -422 2383 99 0 0 chr5 79747987 79748291 -119881859 - AluSq SINE Alu -9 304 1 428 259 38 94 chr5 79748291 79748372 -119881778 + L2 LINE L2 2892 2976 -338 1679 83 9 0 chr5 79748403 79748619 -119881531 + L1PA10 LINE L1 5932 6149 -19 180 0 0 0 chr5 79748619 79748639 -119881511 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1483 245 24 38 chr5 79748648 79749303 -119880847 - L1MDa LINE L1 -3586 2954 2296 253 258 0 15 chr5 79749303 79749369 -119880781 + L2 LINE L2 3249 3313 0 383 177 0 0 chr5 79749696 79749758 -119880392 - AluJ/FRAM SINE Alu -12 290 229 441 252 35 28 chr5 79749761 79749904 -119880246 + L1MC4a LINE L1 5722 5865 -1943 1791 258 93 42 chr5 79750362 79750964 -119879186 - MER45C DNA AcHobo -320 633 1 28 61 0 0 chr5 79752349 79752398 -119877752 + AT_rich Low_complexity Low_complexity 1 49 0 516 267 84 71 chr5 79754270 79754779 -119875371 + L1MEd LINE L1 737 1252 -4867 335 257 49 14 chr5 79754951 79755095 -119875055 + HAL1 LINE L1 1373 1521 -986 743 220 50 13 chr5 79755099 79755258 -119874892 - MIR SINE MIR -87 175 11 399 290 22 22 chr5 79756038 79756176 -119873974 + MIR SINE MIR 119 256 -6 324 320 21 10 chr5 79756860 79756957 -119873193 + MIR SINE MIR 37 134 -128 1878 197 16 21 chr5 79757210 79757586 -119872564 - MLT1A2 LTR MaLR 0 374 1 380 270 9 9 chr5 79757993 79758108 -119872042 - L2 LINE L2 -9 3304 3190 225 247 27 55 chr5 79758184 79758257 -119871893 + MIR3 SINE MIR 85 155 -53 545 194 32 65 chr5 79759281 79759436 -119870714 - MIR SINE MIR -73 189 40 1628 218 24 6 chr5 79759547 79759882 -119870268 - MER58B DNA MER1_type 0 341 1 867 108 0 0 chr5 79810398 79810527 -119819623 + (TA)n Simple_repeat Simple_repeat 2 130 0 1126 154 0 11 chr5 79811326 79811514 -119818636 + AluJb SINE Alu 127 312 0 252 0 0 0 chr5 79811879 79811907 -119818243 + (A)n Simple_repeat Simple_repeat 1 28 0 202 138 35 0 chr5 79815538 79815596 -119814554 + (TA)n Simple_repeat Simple_repeat 1 60 0 720 105 33 26 chr5 79815809 79815962 -119814188 + GA-rich Low_complexity Low_complexity 1 154 0 23 0 0 0 chr5 79815968 79815991 -119814159 + AT_rich Low_complexity Low_complexity 1 23 0 2291 111 5 42 chr5 79815993 79816370 -119813780 - L1MB2 LINE L1 -27 6144 5782 30 27 0 0 chr5 79816375 79816412 -119813738 + AT_rich Low_complexity Low_complexity 1 37 0 225 213 0 16 chr5 79816676 79816737 -119813413 + (TA)n Simple_repeat Simple_repeat 2 61 0 1318 146 59 5 chr5 79816739 79816959 -119813191 - L1M3 LINE L1 -353 5818 5587 22 0 0 0 chr5 79816970 79816992 -119813158 + AT_rich Low_complexity Low_complexity 1 22 0 466 198 110 64 chr5 79817967 79818094 -119812056 - L1MB7 LINE L1 -1 6183 6042 1435 128 13 34 chr5 79818094 79818329 -119811821 - MER30 DNA MER1_type 0 230 1 466 198 110 64 chr5 79818329 79818357 -119811793 - L1MB7 LINE L1 -142 6042 6017 231 215 154 0 chr5 79818359 79818424 -119811726 - MER5A DNA MER1_type -114 75 1 2709 36 0 0 chr5 79818444 79818748 -119811402 + AluY SINE Alu 1 304 -7 195 100 0 0 chr5 79821254 79821284 -119808866 + (CA)n Simple_repeat Simple_repeat 1 30 0 207 0 0 0 chr5 79822063 79822086 -119808064 + (A)n Simple_repeat Simple_repeat 1 23 0 310 242 134 65 chr5 79824328 79824514 -119805636 + MIR3 SINE MIR 7 205 -3 345 339 47 62 chr5 79824766 79825040 -119805110 - L2 LINE L2 -1 3271 3002 284 310 259 3 chr5 79825735 79826032 -119804118 + L3 LINE CR1 244 616 -961 209 273 30 0 chr5 79826051 79826117 -119804033 + GA-rich Low_complexity Low_complexity 1 68 0 893 288 264 19 chr5 79826120 79826839 -119803311 + L3 LINE CR1 613 1507 -70 2445 190 76 6 chr5 79827717 79828254 -119801896 + MER90 LTR ERV1 1 575 0 257 310 69 26 chr5 79828568 79828684 -119801466 + L2 LINE L2 3193 3313 0 510 267 330 8 chr5 79828725 79828983 -119801167 - MER102b DNA MER1_type 0 341 1 298 291 47 16 chr5 79828983 79829110 -119801040 - MIR3 SINE MIR -48 160 30 2346 261 107 68 chr5 79829529 79830433 -119799717 - HAL1 LINE L1 -1167 1340 367 2105 116 3 0 chr5 79830433 79830754 -119799396 - AluSq SINE Alu 0 323 2 2346 261 107 68 chr5 79830754 79831136 -119799014 - HAL1 LINE L1 -2140 367 2 963 164 7 7 chr5 79831773 79831962 -119798188 + AluJb SINE Alu 132 320 0 314 189 129 61 chr5 79832508 79832640 -119797510 + L2 LINE L2 3172 3312 -1 21 36 0 0 chr5 79832703 79832731 -119797419 + AT_rich Low_complexity Low_complexity 1 28 0 1809 58 0 0 chr5 79832731 79832957 -119797193 - L1PA5 LINE L1 -6 6148 5923 225 385 39 33 chr5 79833066 79833401 -119796749 - L2 LINE L2 -423 2891 2555 2236 114 20 0 chr5 79834011 79834317 -119795833 - AluSx SINE Alu 0 312 1 369 0 0 0 chr5 79836414 79836455 -119793695 + (TG)n Simple_repeat Simple_repeat 1 41 0 234 207 0 0 chr5 79836653 79836711 -119793439 + CT-rich Low_complexity Low_complexity 3 60 0 22 35 0 0 chr5 79837272 79837301 -119792849 + GC_rich Low_complexity Low_complexity 1 29 0 399 307 33 0 chr5 79837562 79837712 -119792438 + (CACG)n Simple_repeat Simple_repeat 1 155 0 * 456 269 31 0 chr5 79837613 79837773 -119792377 + (CA)n Simple_repeat Simple_repeat 1 165 0 240 59 0 0 chr5 79839320 79839354 -119790796 + (TG)n Simple_repeat Simple_repeat 1 34 0 2430 67 0 10 chr5 79846308 79846635 -119783515 + AluY SINE Alu 1 311 0 305 260 167 13 chr5 79847192 79847342 -119782808 - MIR SINE MIR -15 247 75 807 154 15 22 chr5 79849140 79849276 -119780874 + AluJo SINE Alu 1 135 -177 1878 101 91 11 chr5 79851392 79851668 -119778482 + AluSx SINE Alu 1 298 -14 1237 296 123 9 chr5 79851975 79852868 -119777282 - L2 LINE L2 -6 3307 2308 477 258 36 24 chr5 79853122 79853233 -119776917 + MIR3 SINE MIR 40 155 -53 945 201 16 16 chr5 79853233 79853422 -119776728 + MER5A DNA MER1_type 1 189 0 477 258 36 24 chr5 79853422 79853477 -119776673 + MIR3 SINE MIR 155 208 0 2349 96 3 22 chr5 79854115 79854428 -119775722 - AluSx SINE Alu -5 307 1 2412 92 0 3 chr5 79854683 79854989 -119775161 - AluSg SINE Alu -5 305 1 259 265 102 0 chr5 79856468 79856566 -119773584 + MER103 DNA DNA 36 143 -23 319 310 58 29 chr5 79856956 79857127 -119773023 + L1MC/D LINE L1 5585 5760 -2048 840 278 138 60 chr5 79857471 79857950 -119772200 + MLT1H1 LTR MaLR 32 547 -8 187 231 0 39 chr5 79858737 79858789 -119771361 + L2 LINE L2 3263 3312 -1 4830 163 5 21 chr5 79859992 79860956 -119769194 - L1MB8 LINE L1 -2 6176 5229 674 216 0 22 chr5 79860956 79861095 -119769055 + FLAM_C SINE Alu 1 136 -7 681 97 8 112 chr5 79861144 79861186 -119768964 - FLAM_A SINE Alu -170 141 96 2305 87 3 3 chr5 79861186 79861486 -119768664 + AluSq SINE Alu 2 301 -12 681 97 8 112 chr5 79861486 79861577 -119768573 - FLAM_A SINE Alu -215 96 22 1184 200 8 15 chr5 79861600 79861865 -119768285 - L1MB8 LINE L1 -946 5200 4938 259 276 59 47 chr5 79862260 79862430 -119767720 + L1ME LINE L1 5540 5711 -410 519 197 105 26 chr5 79862476 79862704 -119767446 - Charlie7 DNA MER1_type -43 2569 2324 733 288 136 22 chr5 79862736 79863198 -119766952 - Charlie7 DNA MER1_type -2097 515 1 262 128 0 0 chr5 79863272 79863311 -119766839 + MIR SINE MIR 113 151 -111 344 300 0 0 chr5 79863315 79863405 -119766745 + MIR SINE MIR 129 218 -44 189 347 16 48 chr5 79863512 79863636 -119766514 + L2 LINE L2 3194 3313 0 359 341 16 24 chr5 79865081 79865204 -119764946 + MIR3 SINE MIR 10 131 -77 355 306 25 56 chr5 79865630 79865790 -119764360 + MIR SINE MIR 34 188 -74 2100 106 3 7 chr5 79865881 79866173 -119763977 - AluSx SINE Alu -21 291 1 2652 99 48 12 chr5 79866347 79866759 -119763391 + MSTA LTR MaLR 2 428 0 325 235 49 20 chr5 79866839 79866941 -119763209 + MER112 DNA MER1_type 1 105 -155 33 0 0 0 chr5 79867301 79867334 -119762816 + AT_rich Low_complexity Low_complexity 1 33 0 280 81 16 48 chr5 79867347 79867409 -119762741 - L1MA3 LINE L1 -1 6303 6242 2068 144 0 0 chr5 79869198 79869496 -119760654 - AluSx SINE Alu -14 298 1 24 0 0 0 chr5 79869558 79869582 -119760568 + AT_rich Low_complexity Low_complexity 1 24 0 342 269 236 49 chr5 79869668 79869973 -119760177 + L2 LINE L2 2952 3313 0 185 154 26 0 chr5 79870643 79870682 -119759468 + GA-rich Low_complexity Low_complexity 1 40 0 286 280 17 17 chr5 79870824 79870942 -119759208 - L1ME LINE L1 -462 5659 5542 1157 258 101 14 chr5 79871447 79871874 -119758276 - LTR16B LTR ERVL 0 464 1 3146 140 24 44 chr5 79872575 79873088 -119757062 - L1MC1 LINE L1 0 6333 5832 1978 170 0 3 chr5 79873088 79873400 -119756750 - AluJb SINE Alu -1 311 1 3146 140 24 44 chr5 79873400 79873501 -119756649 - L1MC1 LINE L1 -501 5832 5731 252 349 122 41 chr5 79873841 79874013 -119756137 + L2 LINE L2 2853 3038 -275 657 251 100 13 chr5 79874174 79874405 -119755745 - MLT1H1 LTR MaLR -2 553 303 344 235 30 43 chr5 79874561 79874745 -119755405 - MLT1H1 LTR MaLR -323 226 2 387 0 0 0 chr5 79875107 79875150 -119755000 + (CA)n Simple_repeat Simple_repeat 2 44 0 279 0 0 0 chr5 79875149 79875180 -119754970 + (GA)n Simple_repeat Simple_repeat 2 32 0 * 644 246 45 0 chr5 79875281 79875460 -119754690 + L1ME LINE L1 5516 5702 -419 694 116 4 6 chr5 79875530 79875651 -119754499 - LTR12 LTR ERV1 0 714 374 599 129 0 0 chr5 79875649 79875742 -119754408 - HERV30 LTR ERV1 -3993 4264 4172 * 19493 116 12 14 chr5 79875749 79878851 -119751299 - HERV30 LTR ERV1 -5260 3139 43 652 149 47 74 chr5 79878821 79878969 -119751181 - pTR5 LTR ERV1 -1994 444 301 * 319 178 61 19 chr5 79878969 79879075 -119751075 - LTR30 LTR ERV1 -79 677 553 1342 131 42 56 chr5 79879075 79879376 -119750774 - LTR12 LTR ERV1 -444 1681 57 248 231 0 0 chr5 79879376 79879428 -119750722 - LTR30 LTR ERV1 -670 52 1 1055 257 103 20 chr5 79879621 79880108 -119750042 - L1ME3A LINE L1 -219 5951 5425 3840 186 46 12 chr5 79880143 79881080 -119749070 + L1MA4A LINE L1 2806 3777 -3071 * 5969 171 10 41 chr5 79881076 79881493 -119748657 + L1MA4A LINE L1 4665 5093 -1777 2133 100 30 7 chr5 79881493 79881792 -119748358 + AluSx SINE Alu 3 308 -4 5969 171 10 41 chr5 79881792 79882780 -119747370 + L1MA4A LINE L1 5093 6030 -840 1757 155 11 4 chr5 79882782 79883059 -119747091 + AluJb SINE Alu 3 281 -31 4953 127 18 4 chr5 79883097 79883899 -119746251 + L1MA4A LINE L1 6182 6994 -11 30 77 0 0 chr5 79884014 79884079 -119746071 + AT_rich Low_complexity Low_complexity 1 65 0 1853 159 3 30 chr5 79884195 79884497 -119745653 - AluJo SINE Alu -18 294 1 556 146 345 0 chr5 79884605 79884664 -119745486 + L1MA4A LINE L1 6059 6096 -207 2478 63 0 3 chr5 79884664 79884964 -119745186 + AluY SINE Alu 2 300 -11 556 146 345 0 chr5 79884964 79885069 -119745081 + L1MA4A LINE L1 6096 6280 -23 333 251 52 11 chr5 79885274 79885429 -119744721 + L1MEc LINE L1 1739 1888 -4654 6614 196 27 37 chr5 79885838 79887148 -119743002 - L1MC1 LINE L1 0 6333 5012 2085 133 0 0 chr5 79887148 79887441 -119742709 - AluSx SINE Alu -14 298 6 6614 196 27 37 chr5 79887441 79889208 -119740942 - L1MC1 LINE L1 -1321 5012 3299 447 238 77 48 chr5 79889283 79889451 -119740699 - MIR SINE MIR 0 262 90 704 233 252 5 chr5 79890085 79890625 -119739525 + LTR50 LTR ERVL 3 769 -26 3309 205 46 63 chr5 79891930 79893399 -119736751 + L1MEc LINE L1 2214 3665 -2875 2496 138 66 31 chr5 79893404 79893890 -119736260 + L1MB5 LINE L1 5662 6164 -10 6347 31 12 13 chr5 79893909 79894659 -119735491 + SVA Other Other 638 1386 0 254 247 55 75 chr5 79894769 79894787 -119735363 + L1PB4 LINE L1 5783 5800 -356 306 0 0 0 chr5 79894787 79894821 -119735329 + (TG)n Simple_repeat Simple_repeat 2 35 0 254 247 55 75 chr5 79894821 79894948 -119735202 + L1PB4 LINE L1 5800 5925 -231 * 1018 168 2 9 chr5 79894840 79895027 -119735123 + L1MB7 LINE L1 5818 5965 -219 252 0 0 0 chr5 79895027 79895055 -119735095 + (CA)n Simple_repeat Simple_repeat 2 29 0 1018 168 2 9 chr5 79895055 79895078 -119735072 + L1MB7 LINE L1 5965 5987 -197 * 4413 228 55 20 chr5 79895076 79895404 -119734746 + L1MEc LINE L1 3648 3963 -2577 210 37 0 0 chr5 79895404 79895431 -119734719 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4413 228 55 20 chr5 79895431 79895563 -119734587 + L1MEc LINE L1 3963 4089 -2451 1993 148 4 0 chr5 79895563 79895840 -119734310 + AluSx SINE Alu 3 280 -32 4413 228 55 20 chr5 79895840 79896844 -119733306 + L1MEc LINE L1 4089 5164 -1376 233 208 0 0 chr5 79896963 79897011 -119733139 + MLT1J LTR MaLR 1 48 -463 380 214 36 0 chr5 79897012 79897096 -119733054 + Tigger2 DNA MER2_type 2622 2708 -10 903 151 29 0 chr5 79897681 79897820 -119732330 - FLAM_C SINE Alu 0 143 1 28 29 0 0 chr5 79898163 79898198 -119731952 + AT_rich Low_complexity Low_complexity 1 35 0 186 211 26 0 chr5 79898337 79898375 -119731775 - MIR SINE MIR -149 113 75 251 346 28 9 chr5 79898692 79898799 -119731351 - MIR SINE MIR 0 262 154 1728 173 0 33 chr5 79898907 79899214 -119730936 + AluJo SINE Alu 1 297 -15 1985 161 3 0 chr5 79899304 79899603 -119730547 - AluJb SINE Alu -12 300 1 218 155 35 35 chr5 79899804 79899862 -119730288 + (TAA)n Simple_repeat Simple_repeat 2 59 0 28 61 0 0 chr5 79900119 79900168 -119729982 + AT_rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr5 79900355 79900384 -119729766 + AT_rich Low_complexity Low_complexity 1 29 0 300 241 62 36 chr5 79901170 79901282 -119728868 - MLT1J LTR MaLR -19 492 378 2203 112 3 0 chr5 79901636 79901945 -119728205 + AluSp SINE Alu 1 310 0 1690 149 65 4 chr5 79902011 79902286 -119727864 - AluJb SINE Alu -20 292 1 192 25 100 0 chr5 79902836 79902876 -119727274 + A-rich Low_complexity Low_complexity 1 44 0 487 232 4 69 chr5 79904165 79904398 -119725752 + L1MEc LINE L1 5390 5607 -933 628 193 62 0 chr5 79904408 79904553 -119725597 - L1ME LINE L1 -435 5735 5582 1832 229 93 24 chr5 79904614 79905121 -119725029 - MLT1F LTR MaLR 0 542 1 639 252 40 25 chr5 79905458 79905675 -119724475 - HERVL LTR ERVL -1905 3091 3006 318 375 36 0 chr5 79906388 79906500 -119723650 - L2 LINE L2 -16 3256 3141 465 132 0 0 chr5 79906604 79906672 -119723478 + Tigger2 DNA MER2_type 1 68 -2650 * 2299 128 62 28 chr5 79906657 79906857 -119723293 + Tigger2 DNA MER2_type 2267 2459 -259 2282 119 0 0 chr5 79906857 79907160 -119722990 - AluSx SINE Alu -9 303 1 2299 128 62 28 chr5 79907160 79907396 -119722754 + Tigger2 DNA MER2_type 2459 2718 0 361 209 81 12 chr5 79907948 79908034 -119722116 - L2 LINE L2 -7 3265 3174 2822 93 2 132 chr5 79908205 79908653 -119721497 - MER4B LTR ERV1 0 779 278 2261 102 10 0 chr5 79908653 79908957 -119721193 - AluSp SINE Alu -6 307 1 2822 93 2 132 chr5 79908957 79909204 -119720946 - MER4B LTR ERV1 -501 278 1 922 211 134 5 chr5 79909214 79909423 -119720727 - MIR SINE MIR -24 238 3 609 246 28 50 chr5 79909520 79909699 -119720451 + MER8 DNA MER2_type 3 177 -62 330 135 27 68 chr5 79909734 79909768 -119720382 - Tigger2 DNA MER2_type -2647 71 37 3588 149 17 20 chr5 79909768 79910405 -119719745 - MER41B LTR ERV1 0 635 1 330 135 27 68 chr5 79910405 79910444 -119719706 - Tigger2 DNA MER2_type -2681 37 1 297 89 0 0 chr5 79910851 79910896 -119719254 + (TG)n Simple_repeat Simple_repeat 2 46 0 1918 100 48 52 chr5 79911436 79911745 -119718405 + AluSx SINE Alu 5 312 0 197 292 21 0 chr5 79911873 79911921 -119718229 - L2 LINE L2 -14 3299 3251 303 287 65 96 chr5 79912821 79913082 -119717068 - L1M2 LINE L1 -5423 1426 1174 3876 93 22 96 chr5 79913395 79914112 -119716038 - MER4A LTR ERV1 0 664 1 4188 140 59 20 chr5 79914152 79915006 -119715144 - MER4D LTR ERV1 0 866 1 485 327 111 18 chr5 79915336 79915562 -119714588 + MIR SINE MIR 12 258 -4 370 232 9 105 chr5 79915561 79915687 -119714463 - MIR SINE MIR -63 145 44 * 188 83 0 28 chr5 79916467 79916503 -119713647 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 766 93 0 0 chr5 79916503 79916610 -119713540 - L1PA8 LINE L1 -24 6148 6042 310 113 145 0 chr5 79917683 79917745 -119712405 - L1MA5 LINE L1 -2 6298 6228 1765 136 56 3 chr5 79917827 79918114 -119712036 - AluSx SINE Alu -10 302 1 627 164 9 27 chr5 79918408 79918518 -119711632 + MER81 DNA DNA 4 111 -3 715 254 24 43 chr5 79920512 79920735 -119709415 + MIR SINE MIR 34 252 -10 1621 194 30 30 chr5 79920763 79921128 -119709022 - MLT1A1 LTR MaLR 0 365 1 2195 30 45 0 chr5 79922171 79922475 -119707675 + AluY SINE Alu 1 316 0 180 0 0 0 chr5 79922816 79922836 -119707314 + (TTA)n Simple_repeat Simple_repeat 2 21 0 195 42 0 0 chr5 79923062 79923086 -119707064 + (T)n Simple_repeat Simple_repeat 1 24 0 416 235 172 31 chr5 79923265 79923464 -119706686 - L2 LINE L2 -316 2997 2773 1890 155 44 55 chr5 79923612 79924069 -119706081 + Charlie1b DNA MER1_type 11 462 -61 21 0 0 0 chr5 79924765 79924786 -119705364 + AT_rich Low_complexity Low_complexity 1 21 0 602 264 70 12 chr5 79924870 79925128 -119705022 - L1ME3A LINE L1 -302 5868 5596 1437 198 46 12 chr5 79925138 79925467 -119704683 - MLT1A1 LTR MaLR 0 365 26 350 219 81 32 chr5 79925518 79925641 -119704509 - L1ME3A LINE L1 -579 5585 5457 2400 35 0 3 chr5 79925687 79926007 -119704143 - AluY SINE Alu 0 319 1 230 371 11 0 chr5 79926952 79927041 -119703109 + MLT1K LTR MaLR 178 267 -321 5348 95 41 37 chr5 79927317 79928573 -119701577 - SVA Other Other -955 1380 4 2357 112 80 19 chr5 79929417 79929844 -119700306 + MER4B LTR ERV1 2 454 -156 660 192 17 41 chr5 79929844 79930016 -119700134 + MER50 LTR ERV1 1 168 -566 2345 188 66 46 chr5 79930024 79930352 -119699798 + MER50 LTR ERV1 109 456 -278 3507 67 58 2 chr5 79930352 79930816 -119699334 - LTR2B LTR ERV1 0 490 1 2345 188 66 46 chr5 79930816 79931094 -119699056 + MER50 LTR ERV1 456 727 -7 1092 127 0 0 chr5 79931100 79931258 -119698892 + MER4A LTR ERV1 505 662 -2 2506 113 208 40 chr5 79931262 79931926 -119698224 + MER50-int LTR ERV1 1 841 -5757 1218 224 87 12 chr5 79931960 79932295 -119697855 + MER50-int LTR ERV1 1845 2204 -4127 13383 124 78 48 chr5 79932319 79932936 -119697214 + MER50-int LTR ERV1 193 790 -5968 2034 139 3 3 chr5 79932936 79933246 -119696904 - AluSp SINE Alu -3 310 1 13383 124 78 48 chr5 79933246 79933379 -119696771 + MER50-int LTR ERV1 790 918 -5840 2148 106 14 3 chr5 79933379 79933672 -119696478 - AluSg SINE Alu -14 296 1 13383 124 78 48 chr5 79933672 79934913 -119695237 + MER50-int LTR ERV1 918 2120 -4638 2008 122 11 0 chr5 79934913 79935183 -119694967 + AluSx SINE Alu 1 273 -39 13383 124 78 48 chr5 79935183 79935976 -119694174 + MER50-int LTR ERV1 2120 3067 -3691 1518 143 0 29 chr5 79935976 79936111 -119694039 + AluSx SINE Alu 1 131 -181 2726 3 0 0 chr5 79936111 79936437 -119693713 + AluYb8 SINE Alu 1 326 0 1518 143 0 29 chr5 79936437 79936542 -119693608 + AluSx SINE Alu 131 237 -75 13383 124 78 48 chr5 79936542 79936571 -119693579 + MER50-int LTR ERV1 3067 3094 -3664 259 61 0 0 chr5 79936598 79936647 -119693503 + MER50-int LTR ERV1 3046 3094 -3664 2127 116 33 0 chr5 79936651 79936980 -119693170 + MER50-int LTR ERV1 3446 3785 -2973 2400 78 6 9 chr5 79936985 79937316 -119692834 + LTR8 LTR ERV1 362 691 0 381 41 0 0 chr5 79937317 79937366 -119692784 + MER4B-int LTR ERV1 6686 6734 -24 3054 115 81 49 chr5 79937386 79937491 -119692659 + MER4B LTR ERV1 1 101 -509 2177 89 15 52 chr5 79937491 79937816 -119692334 + AluSq SINE Alu 1 313 0 3054 115 81 49 chr5 79937816 79938301 -119691849 + MER4B LTR ERV1 101 610 0 29 0 0 0 chr5 79938680 79938709 -119691441 + AT_rich Low_complexity Low_complexity 1 29 0 280 200 12 38 chr5 79938728 79938808 -119691342 + (TATATG)n Simple_repeat Simple_repeat 6 83 0 658 260 51 31 chr5 79939050 79939342 -119690808 - L1MC4a LINE L1 -1956 5852 5555 2822 134 102 26 chr5 79939435 79940002 -119690148 + Tigger2 DNA MER2_type 137 746 -1972 1288 161 44 8 chr5 79940066 79940315 -119689835 + Tigger2 DNA MER2_type 2461 2718 0 234 267 67 67 chr5 79940598 79940688 -119689462 - MIR SINE MIR -116 146 57 26 0 0 0 chr5 79942665 79942691 -119687459 + AT_rich Low_complexity Low_complexity 1 26 0 724 186 0 0 chr5 79942691 79942820 -119687330 - FLAM_C SINE Alu -2 131 3 206 328 0 16 chr5 79943227 79943288 -119686862 - L2 LINE L2 -4 3309 3250 631 228 90 32 chr5 79943852 79944041 -119686109 - MIR SINE MIR -11 251 52 2457 88 3 0 chr5 79944135 79944443 -119685707 + AluSx SINE Alu 1 309 -3 734 168 35 46 chr5 79944548 79944721 -119685429 - MER20 DNA MER1_type -4 215 45 473 283 0 0 chr5 79945046 79945138 -119685012 + L2 LINE L2 3143 3234 -38 289 270 51 73 chr5 79945171 79945201 -119684949 - MIR SINE MIR -123 139 110 984 308 44 24 chr5 79945201 79945656 -119684494 + LTR16B LTR ERVL 1 464 0 289 270 51 73 chr5 79945656 79945762 -119684388 - MIR SINE MIR -152 110 6 1098 143 65 43 chr5 79946655 79946885 -119683265 + MER46A DNA MER2_type 1 235 -1 376 354 9 0 chr5 79948033 79948146 -119682004 - L2 LINE L2 -2 3270 3157 660 325 180 26 chr5 79948174 79948898 -119681252 + L2 LINE L2 2141 2975 -339 1968 144 14 0 chr5 79949505 79949796 -119680354 - AluSx SINE Alu -17 295 1 585 204 30 117 chr5 79949799 79950063 -119680087 + MER112 DNA MER1_type 8 248 -12 2321 99 0 0 chr5 79950092 79950386 -119679764 + AluSx SINE Alu 1 294 -18 414 300 62 0 chr5 79950524 79950654 -119679496 - MIR SINE MIR -80 182 45 499 294 35 14 chr5 79951329 79951472 -119678678 - MIR3 SINE MIR -24 184 39 200 361 34 63 chr5 79952216 79952454 -119677696 - L2 LINE L2 -212 3060 2830 2467 73 0 7 chr5 79952616 79952919 -119677231 - AluY SINE Alu -10 301 1 186 43 0 0 chr5 79953082 79953105 -119677045 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 13538 123 44 11 chr5 79953820 79955676 -119674474 - Tigger1 DNA MER2_type 0 2418 472 2133 135 3 0 chr5 79955676 79955972 -119674178 - AluSx SINE Alu -15 297 1 13538 123 44 11 chr5 79955972 79956393 -119673757 - Tigger1 DNA MER2_type -1946 472 66 1662 60 0 0 chr5 79956393 79956594 -119673556 - AluY SINE Alu -3 308 108 23 33 0 0 chr5 79957211 79957241 -119672909 + AT_rich Low_complexity Low_complexity 1 30 0 424 328 13 18 chr5 79957266 79957469 -119672681 + L1ME LINE L1 5175 5377 -769 668 256 122 6 chr5 79957499 79957671 -119672479 - MIR SINE MIR -39 223 32 603 285 111 8 chr5 79957686 79958072 -119672078 + L1ME LINE L1 5395 5820 -301 258 105 0 0 chr5 79958229 79958267 -119671883 + (TGGA)n Simple_repeat Simple_repeat 1 38 0 1315 216 120 12 chr5 79958429 79958846 -119671304 - MLT1C LTR MaLR 0 467 6 2129 119 0 0 chr5 79959649 79959927 -119670223 - AluSx SINE Alu -22 290 13 29 0 0 0 chr5 79960273 79960302 -119669848 + AT_rich Low_complexity Low_complexity 1 29 0 187 362 0 14 chr5 79961609 79961678 -119668472 + MIR SINE MIR 16 83 -125 1014 116 0 0 chr5 79961706 79961853 -119668297 - AluSg/x SINE Alu -2 310 164 22 35 0 0 chr5 79965675 79965704 -119664446 + AT_rich Low_complexity Low_complexity 1 29 0 35 24 0 0 chr5 79966105 79966147 -119664003 + AT_rich Low_complexity Low_complexity 1 42 0 392 243 99 0 chr5 79966323 79966434 -119663716 + MER103 DNA DNA 2 123 -43 321 251 59 128 chr5 79968075 79968150 -119662000 - L3 LINE CR1 -538 1039 960 2229 98 3 0 chr5 79968150 79968446 -119661704 - AluSx SINE Alu -15 297 1 321 251 59 128 chr5 79968446 79968573 -119661577 - L3 LINE CR1 -617 960 851 278 299 107 43 chr5 79968745 79968932 -119661218 - L2 LINE L2 -923 2391 2193 22 0 0 0 chr5 79969248 79969270 -119660880 + AT_rich Low_complexity Low_complexity 1 22 0 192 286 20 82 chr5 79969668 79969766 -119660384 + MIR SINE MIR 90 181 -81 281 272 72 40 chr5 79969965 79970090 -119660060 - L2 LINE L2 -215 3057 2929 2122 103 3 3 chr5 79970729 79971030 -119659120 - AluSp SINE Alu -12 301 1 2165 110 0 7 chr5 79971030 79971330 -119658820 - AluSq SINE Alu -15 298 1 838 287 106 18 chr5 79971596 79972116 -119658034 - MLT1L LTR MaLR -2 613 5 453 289 53 21 chr5 79972200 79972390 -119657760 + MIR SINE MIR 65 260 -2 225 239 111 26 chr5 79973582 79973699 -119656451 - HAL1 LINE L1 -745 1762 1636 852 266 140 0 chr5 79973719 79974012 -119656138 + L2 LINE L2 2968 3301 -12 2281 87 0 0 chr5 79974012 79974324 -119655826 + AluY SINE Alu 1 312 0 420 285 84 71 chr5 79974365 79974543 -119655607 - HAL1 LINE L1 -910 1597 1423 2119 99 3 7 chr5 79974543 79974836 -119655314 - AluSx SINE Alu -11 301 10 420 285 84 71 chr5 79974836 79975036 -119655114 - HAL1 LINE L1 -1084 1423 1214 410 294 100 12 chr5 79975367 79975537 -119654613 + L1ME4a LINE L1 5669 5853 -268 32 44 0 29 chr5 79975550 79975582 -119654568 + AT_rich Low_complexity Low_complexity 1 32 -34 1683 188 7 7 chr5 79975582 79975870 -119654280 - AluJo SINE Alu -24 288 1 32 44 0 29 chr5 79975870 79975905 -119654245 + AT_rich Low_complexity Low_complexity 32 66 0 939 261 88 10 chr5 79975959 79976254 -119653896 - MER46C DNA MER2_type 0 338 21 33 25 0 0 chr5 79976284 79976324 -119653826 + AT_rich Low_complexity Low_complexity 1 40 0 476 286 86 9 chr5 79976510 79976720 -119653430 + L1ME LINE L1 5374 5599 -563 1932 183 56 17 chr5 79976740 79977149 -119653001 - Charlie6 DNA MER1_type -2245 1255 831 321 274 41 0 chr5 79977147 79977220 -119652930 - Charlie6 DNA MER1_type -2787 713 638 * 209 111 111 0 chr5 79977342 79977378 -119652772 - L2 LINE L2 -1 3271 3232 1532 185 71 19 chr5 79977524 79977848 -119652302 - MER58B DNA MER1_type 0 341 1 184 170 38 0 chr5 79978012 79978065 -119652085 + (TAA)n Simple_repeat Simple_repeat 2 56 0 528 240 93 81 chr5 79978090 79978423 -119651727 - MER102b DNA MER1_type -4 337 1 28 91 0 0 chr5 79978493 79978570 -119651580 + AT_rich Low_complexity Low_complexity 1 77 0 2982 178 53 11 chr5 79978689 79979335 -119650815 - L1MB8 LINE L1 -6 6172 5500 225 211 13 79 chr5 79979661 79979737 -119650413 + L2 LINE L2 3237 3307 -6 23 0 0 0 chr5 79979870 79979893 -119650257 + AT_rich Low_complexity Low_complexity 1 23 0 2343 71 7 0 chr5 79980007 79980301 -119649849 + AluY SINE Alu 1 296 -15 22 35 0 0 chr5 79980433 79980462 -119649688 + AT_rich Low_complexity Low_complexity 1 29 0 348 231 77 0 chr5 79980743 79980834 -119649316 - MIR SINE MIR -105 157 60 843 179 14 7 chr5 79980834 79981003 -119649147 - AluJb SINE Alu 0 306 137 349 242 0 0 chr5 79981005 79981071 -119649079 - MIR SINE MIR -196 66 1 186 318 236 23 chr5 79981295 79981515 -119648635 + L2 LINE L2 2825 3091 -181 527 255 107 0 chr5 79981556 79981705 -119648445 + L2 LINE L2 1368 1532 -1782 554 285 39 106 chr5 79981824 79982035 -119648115 + L2 LINE L2 2344 2513 -801 2045 127 16 3 chr5 79982035 79982343 -119647807 - AluSx SINE Alu 0 312 1 554 285 39 106 chr5 79982343 79982566 -119647584 + L2 LINE L2 2513 2749 -565 29 0 0 0 chr5 79983011 79983040 -119647110 + AT_rich Low_complexity Low_complexity 1 29 0 1452 196 0 14 chr5 79983048 79983328 -119646822 - AluJo SINE Alu -36 276 1 1646 151 3 86 chr5 79984602 79984706 -119645444 + AluJb SINE Alu 1 112 -200 1690 153 57 33 chr5 79984706 79985072 -119645078 - THE1C LTR MaLR 0 375 1 1646 151 3 86 chr5 79985072 79985304 -119644846 + AluJb SINE Alu 112 309 -3 1913 227 141 15 chr5 79986077 79986672 -119643478 - L1MD2 LINE L1 -33 6326 5657 2519 102 0 5 chr5 79986674 79987046 -119643104 - L1PB1 LINE L1 0 6151 5782 3829 141 44 5 chr5 79987050 79987145 -119643005 - L1PB1 LINE L1 -262 5889 5799 396 0 0 0 chr5 79987145 79987189 -119642961 + (TA)n Simple_repeat Simple_repeat 2 45 0 3829 141 44 5 chr5 79987189 79988129 -119642021 - L1PB1 LINE L1 -352 5799 4810 2097 147 40 45 chr5 79988129 79988628 -119641522 - L1MD2 LINE L1 -684 5675 5176 1050 170 0 0 chr5 79988644 79988815 -119641335 - AluSg/x SINE Alu -8 302 132 2127 117 27 0 chr5 79988815 79989115 -119641035 - AluSq SINE Alu -5 308 1 2423 227 86 38 chr5 79989118 79989978 -119640172 - L1MD2 LINE L1 -982 5164 4264 3870 212 55 114 chr5 79990005 79990744 -119639406 - L1MD2 LINE L1 -2286 3860 3079 1757 161 36 0 chr5 79990744 79991023 -119639127 - AluJb SINE Alu -23 289 1 3870 212 55 114 chr5 79991023 79991946 -119638204 - L1MD2 LINE L1 -3067 3079 2314 1587 185 14 11 chr5 79991946 79992233 -119637917 - AluJo SINE Alu -24 288 1 3870 212 55 114 chr5 79992233 79992412 -119637738 - L1MD2 LINE L1 -3832 2314 2126 266 250 120 10 chr5 79993165 79993265 -119636885 - MARNA DNA Mariner -468 118 8 271 253 217 0 chr5 79993464 79993547 -119636603 + L2 LINE L2 3168 3268 -4 2376 85 3 3 chr5 79995047 79995354 -119634796 - AluSp SINE Alu -6 307 1 988 89 8 0 chr5 79996287 79996411 -119633739 + AluSg SINE Alu 2 126 -184 189 0 0 0 chr5 79996414 79996435 -119633715 + (TAA)n Simple_repeat Simple_repeat 2 22 0 23 68 0 0 chr5 79997622 79997666 -119632484 + AT_rich Low_complexity Low_complexity 1 44 0 811 227 0 0 chr5 79997809 79997963 -119632187 + FRAM SINE Alu 1 151 -25 673 263 26 7 chr5 79998222 79998374 -119631776 + MER63 DNA MER1_type 1 781 -281 2123 96 7 4 chr5 79998867 79999172 -119630978 + AluSx SINE Alu 1 306 0 22 0 0 0 chr5 79999553 79999575 -119630575 + AT_rich Low_complexity Low_complexity 1 22 0 1933 118 20 3 chr5 79999764 80000061 -119630089 + AluSx SINE Alu 1 302 -10 239 348 65 0 chr5 80000313 80000405 -119629745 + L2 LINE L2 3215 3312 -1 1524 180 168 15 chr5 80002410 80002815 -119627335 + MLT1C LTR MaLR 1 467 0 360 285 111 68 chr5 80002924 80003275 -119626875 + L1M4 LINE L1 4532 4897 -1249 2177 69 0 24 chr5 80003560 80003849 -119626301 - AluSg SINE Alu -28 282 1 685 321 202 8 chr5 80004173 80004749 -119625401 - L2 LINE L2 -4 3309 2607 23 0 0 0 chr5 80004948 80004971 -119625179 + AT_rich Low_complexity Low_complexity 1 23 0 758 174 0 0 chr5 80004975 80005096 -119625054 + FLAM_C SINE Alu 4 124 -19 373 189 123 75 chr5 80005512 80005618 -119624532 + MIR SINE MIR 1 111 -151 195 129 0 0 chr5 80005648 80005679 -119624471 + (A)n Simple_repeat Simple_repeat 1 31 0 2261 89 0 16 chr5 80005978 80006291 -119623859 + AluSg SINE Alu 1 308 -2 386 236 64 58 chr5 80006349 80006607 -119623543 + L1ME LINE L1 5291 5551 -570 2089 123 0 20 chr5 80006630 80006930 -119623220 + AluSx SINE Alu 2 295 -17 564 227 47 0 chr5 80007098 80007226 -119622924 + L1MC5 LINE L1 7268 7401 -560 755 207 29 119 chr5 80007268 80007463 -119622687 + L1MC5 LINE L1 7528 7668 -293 2610 70 6 11 chr5 80007463 80007818 -119622332 + THE1A LTR MaLR 1 353 -2 755 207 29 119 chr5 80007818 80008032 -119622118 + L1MC5 LINE L1 7668 7900 -61 2035 79 32 54 chr5 80008220 80008536 -119621614 + AluY SINE Alu 1 309 -2 2285 91 14 0 chr5 80008961 80009258 -119620892 + AluSx SINE Alu 1 301 -11 21 36 0 0 chr5 80009266 80009294 -119620856 + AT_rich Low_complexity Low_complexity 1 28 0 373 259 142 26 chr5 80009302 80009597 -119620553 + L1M4 LINE L1 5077 5419 -745 6486 150 18 35 chr5 80009735 80009929 -119620221 - L1MC1 LINE L1 0 6333 6137 2111 123 3 0 chr5 80009929 80010222 -119619928 + AluSx SINE Alu 1 294 -18 6486 150 18 35 chr5 80010222 80010550 -119619600 - L1MC1 LINE L1 -196 6137 5805 1960 155 10 3 chr5 80010550 80010860 -119619290 + AluJo SINE Alu 1 312 0 6486 150 18 35 chr5 80010860 80012176 -119617974 - L1MC1 LINE L1 -528 5805 4648 2262 113 13 0 chr5 80012176 80012477 -119617673 + AluSq SINE Alu 1 305 -8 6486 150 18 35 chr5 80012477 80012507 -119617643 - L1MC1 LINE L1 -1685 4648 4619 261 191 95 0 chr5 80012574 80012637 -119617513 + MLT1I LTR MaLR 44 112 -297 4787 220 12 25 chr5 80012647 80013835 -119616315 - L1MC1 LINE L1 -1538 4608 3437 1396 236 66 3 chr5 80013975 80014280 -119615870 + MLT1I LTR MaLR 85 408 -1 301 354 12 30 chr5 80014410 80014574 -119615576 - MLT1K LTR MaLR -275 313 153 248 376 26 8 chr5 80014549 80014666 -119615484 - MLT1K LTR MaLR -343 245 127 * 355 224 35 43 chr5 80014754 80014870 -119615280 + L1M4 LINE L1 325 439 -6103 547 242 0 55 chr5 80014898 80015063 -119615087 + L1MA10 LINE L1 6175 6330 -4 636 298 82 35 chr5 80015064 80015430 -119614720 - LTR67 LTR ERVL -74 483 101 387 319 17 86 chr5 80015924 80016156 -119613994 - L2 LINE L2 -50 3222 3007 408 323 37 6 chr5 80016238 80016399 -119613751 + MIR SINE MIR 7 172 -90 516 234 87 33 chr5 80016640 80016824 -119613326 - LTR33A LTR ERVL -96 427 234 373 165 0 71 chr5 80017904 80017989 -119612161 - L2 LINE L2 -1 3271 3193 220 243 43 29 chr5 80018422 80018492 -119611658 + MIR3 SINE MIR 93 163 -45 1638 98 65 49 chr5 80018499 80018744 -119611406 + AluSg SINE Alu 1 249 -61 666 194 113 97 chr5 80018831 80019017 -119611133 - MER5A DNA MER1_type 0 189 1 301 292 15 51 chr5 80019120 80019257 -119610893 - MER5A DNA MER1_type -42 147 16 454 230 93 89 chr5 80019629 80019899 -119610251 - HAL1 LINE L1 -5 2502 2232 305 289 132 85 chr5 80019901 80020005 -119610145 - HAL1 LINE L1 -405 2102 2004 2283 114 7 0 chr5 80020005 80020312 -119609838 + AluSx SINE Alu 1 309 -3 305 289 132 85 chr5 80020312 80020549 -119609601 - HAL1 LINE L1 -503 2004 1745 1205 265 103 73 chr5 80020554 80020618 -119609532 - HAL1 LINE L1 -1250 1257 1196 986 213 118 0 chr5 80020618 80020905 -119609245 + MER33 DNA MER1_type 2 322 -2 1205 265 103 73 chr5 80020905 80021692 -119608458 - HAL1 LINE L1 -1311 1196 380 342 291 64 68 chr5 80021782 80022002 -119608148 - HAL1 LINE L1 -2288 219 1 314 200 158 58 chr5 80022209 80022329 -119607821 + MIR3 SINE MIR 73 204 -4 1341 228 77 8 chr5 80022636 80022987 -119607163 - MER74B LTR ERVL 0 622 248 493 274 70 95 chr5 80023468 80023909 -119606241 - MLT1J LTR MaLR -81 430 1 245 273 0 0 chr5 80023944 80024010 -119606140 + MIR SINE MIR 183 248 -14 2348 93 7 0 chr5 80024074 80024374 -119605776 + AluSq SINE Alu 1 302 -11 1847 143 15 0 chr5 80024389 80024727 -119605423 + AluSx SINE Alu 7 348 0 1854 121 29 18 chr5 80024730 80025062 -119605088 + AluSq SINE Alu 1 335 0 294 341 17 23 chr5 80025273 80025446 -119604704 - MIR3 SINE MIR -19 189 18 204 135 27 0 chr5 80027422 80027459 -119602691 + (CAA)n Simple_repeat Simple_repeat 2 39 0 481 256 8 38 chr5 80027834 80027967 -119602183 + MER5B DNA MER1_type 2 130 -48 304 136 51 0 chr5 80027977 80028036 -119602114 + MLT1G LTR MaLR 512 573 -17 2412 128 81 3 chr5 80028086 80028470 -119601680 - MSTB LTR MaLR -12 414 1 378 283 14 35 chr5 80028474 80028619 -119601531 - L2 LINE L2 -24 3289 3148 3594 160 14 2 chr5 80028661 80029224 -119600926 + L1 LINE L1 12 581 -6984 7988 189 27 29 chr5 80029325 80030934 -119599216 + L1 LINE L1 3560 5167 -2398 2095 126 0 17 chr5 80030934 80031227 -119598923 + AluSx SINE Alu 3 290 -22 7988 189 27 29 chr5 80031227 80031362 -119598788 + L1 LINE L1 5167 5301 -2264 857 76 92 8 chr5 80031351 80031482 -119598668 - L1M1 LINE L1 -709 5596 5455 * 287 140 0 0 chr5 80032606 80032656 -119597494 - MIR SINE MIR -82 180 131 512 271 63 36 chr5 80033363 80033584 -119596566 - L2 LINE L2 -1 3312 3086 645 289 122 17 chr5 80033734 80034111 -119596039 - MER115 DNA AcHobo -229 464 3 1382 222 109 27 chr5 80034625 80035066 -119595084 + MLT1J LTR MaLR 6 482 -29 184 260 0 0 chr5 80035677 80035727 -119594423 + L2 LINE L2 2985 3034 -238 242 218 0 0 chr5 80035862 80035917 -119594233 + L2 LINE L2 3197 3251 -21 667 215 0 8 chr5 80035926 80036056 -119594094 + FLAM_A SINE Alu 1 129 -4 328 212 35 12 chr5 80036276 80036361 -119593789 + MLT1J2 LTR MaLR 364 450 0 357 248 124 0 chr5 80037703 80037808 -119592342 + L2 LINE L2 3154 3271 -1 33 90 0 0 chr5 80038498 80038587 -119591563 + GC_rich Low_complexity Low_complexity 1 89 0 294 220 8 45 chr5 80038879 80039011 -119591139 + G-rich Low_complexity Low_complexity 1 127 0 250 222 74 12 chr5 80039237 80039318 -119590832 + GA-rich Low_complexity Low_complexity 4 89 0 219 69 0 0 chr5 80039926 80039955 -119590195 + (A)n Simple_repeat Simple_repeat 1 29 0 246 95 0 0 chr5 80041778 80041820 -119588330 + (T)n Simple_repeat Simple_repeat 1 42 0 243 0 0 0 chr5 80043530 80043557 -119586593 + (CA)n Simple_repeat Simple_repeat 2 28 0 216 327 29 0 chr5 80045566 80045670 -119584480 + CT-rich Low_complexity Low_complexity 2 108 0 2538 67 0 19 chr5 80052110 80052424 -119577726 + AluSg SINE Alu 1 308 -2 496 242 39 0 chr5 80056413 80056541 -119573609 - MIR SINE MIR -65 197 65 265 308 60 8 chr5 80057125 80057242 -119572908 - L3 LINE CR1 -1 1576 1454 299 280 93 111 chr5 80057406 80057749 -119572401 - MLT1I LTR MaLR -2 407 71 209 313 0 30 chr5 80058431 80058498 -119571652 + L2 LINE L2 3198 3262 -10 202 309 25 0 chr5 80059230 80059311 -119570839 + MIR SINE MIR 53 135 -73 2040 67 0 57 chr5 80059391 80059740 -119570410 - AluY SINE Alu 0 333 2 2333 116 0 0 chr5 80062267 80062569 -119567581 + AluSx SINE Alu 1 302 -10 186 43 0 0 chr5 80063315 80063338 -119566812 + (TG)n Simple_repeat Simple_repeat 2 24 0 904 172 184 0 chr5 80063435 80063609 -119566541 - MER3 DNA MER1_type -3 206 1 2036 131 0 10 chr5 80064690 80065016 -119565134 - AluSx SINE Alu 0 323 1 198 0 0 0 chr5 80065016 80065038 -119565112 + (T)n Simple_repeat Simple_repeat 1 22 0 435 218 111 69 chr5 80065177 80065393 -119564757 - L1MC5 LINE L1 -35 7926 7702 695 242 32 11 chr5 80065556 80065746 -119564404 - L1MB8 LINE L1 -61 6117 5924 975 146 178 14 chr5 80065971 80066184 -119563966 + L1MB2 LINE L1 5923 6170 -1 351 244 0 0 chr5 80066203 80066285 -119563865 - L2 LINE L2 -1450 1864 1783 1701 164 24 17 chr5 80067151 80067465 -119562685 - AluJo SINE Alu 0 312 1 1094 261 74 5 chr5 80069058 80069437 -119560713 - L1MC4a LINE L1 -1856 5952 5548 518 135 22 22 chr5 80069541 80069630 -119560520 + U3 snRNA snRNA 1 89 -128 4451 164 8 11 chr5 80069630 80070430 -119559720 + L1 LINE L1 4367 5163 -983 899 152 7 0 chr5 80071736 80071881 -119558269 - FRAM SINE Alu -17 159 14 194 286 0 67 chr5 80072783 80072888 -119557262 + MIR SINE MIR 97 194 -68 4020 123 31 2 chr5 80072990 80073797 -119556353 + L1PB2 LINE L1 5016 5846 -305 1064 180 25 54 chr5 80074830 80075069 -119555081 + MLT1A1 LTR MaLR 1 232 -133 1958 284 69 17 chr5 80075218 80076362 -119553788 + L1M4 LINE L1 2557 3760 -2386 24 103 0 0 chr5 80076386 80076473 -119553677 + AT_rich Low_complexity Low_complexity 1 87 0 302 128 0 0 chr5 80076697 80076744 -119553406 + Alu SINE Alu 253 299 -2 190 356 173 19 chr5 80076860 80076964 -119553186 - L2 LINE L2 -3 3269 3150 901 272 33 63 chr5 80077355 80077471 -119552679 + MLT1H LTR MaLR 24 142 -407 1883 144 0 0 chr5 80077471 80077772 -119552378 - AluJb SINE Alu 0 305 5 901 272 33 63 chr5 80077772 80077985 -119552165 + MLT1H LTR MaLR 142 344 -205 207 366 54 27 chr5 80078091 80078203 -119551947 - L2 LINE L2 -561 2753 2639 1979 133 7 30 chr5 80078326 80078627 -119551523 - AluSg SINE Alu -16 294 1 222 118 0 0 chr5 80078707 80078741 -119551409 + (T)n Simple_repeat Simple_repeat 1 34 0 217 353 49 20 chr5 80078842 80078944 -119551206 - MIR SINE MIR -81 181 77 2231 126 7 0 chr5 80079060 80079370 -119550780 - AluSx SINE Alu 0 312 1 226 200 0 0 chr5 80079562 80079602 -119550548 - MLT1J1 LTR MaLR -140 306 267 535 228 95 62 chr5 80079644 80079729 -119550421 - MLT1I LTR MaLR -191 218 137 2121 106 3 17 chr5 80079729 80080022 -119550128 - AluSx SINE Alu -3 309 21 535 228 95 62 chr5 80080022 80080147 -119550003 - MLT1I LTR MaLR -272 137 1 257 317 35 14 chr5 80080167 80080309 -119549841 + MIR3 SINE MIR 20 164 -44 378 346 68 0 chr5 80081032 80081194 -119548956 + MIR SINE MIR 20 192 -70 840 181 0 0 chr5 80081218 80081351 -119548799 - FLAM_C SINE Alu 0 133 1 423 204 0 61 chr5 80081431 80081529 -119548621 - MIR SINE MIR -93 169 78 378 61 0 0 chr5 80081813 80081862 -119548288 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 2180 127 7 0 chr5 80081863 80082170 -119547980 - AluSg SINE Alu -1 309 1 600 301 213 43 chr5 80082439 80083862 -119546288 - L2 LINE L2 -3 3269 1610 267 264 28 0 chr5 80084045 80084117 -119546033 + GA-rich Low_complexity Low_complexity 4 77 0 2349 97 7 0 chr5 80085098 80085408 -119544742 - AluSq SINE Alu -1 312 1 366 123 0 0 chr5 80086122 80086179 -119543971 + (A)n Simple_repeat Simple_repeat 1 57 0 633 220 110 16 chr5 80086606 80086797 -119543353 - MIR SINE MIR -8 254 46 1789 131 39 14 chr5 80087447 80087754 -119542396 - AluSx SINE Alu 0 312 1 433 270 32 8 chr5 80088353 80088479 -119541671 + MIR3 SINE MIR 65 193 -15 2100 130 0 0 chr5 80088989 80089281 -119540869 - AluSg SINE Alu -18 292 1 2409 57 0 0 chr5 80089944 80090272 -119539878 - AluY SINE Alu 0 329 2 540 251 52 135 chr5 80091695 80092164 -119537986 + MLT1J1 LTR MaLR 10 398 -11 2048 97 0 0 chr5 80092757 80093016 -119537134 + AluSx SINE Alu 1 259 -53 2144 153 66 70 chr5 80093457 80093926 -119536224 + L1MD2 LINE L1 5532 5998 -361 2017 134 28 0 chr5 80094053 80094343 -119535807 + AluJb SINE Alu 1 298 -14 1896 141 26 7 chr5 80094561 80094865 -119535285 + AluSx SINE Alu 1 310 -2 369 0 0 0 chr5 80094869 80094910 -119535240 + (CA)n Simple_repeat Simple_repeat 2 42 0 413 215 58 16 chr5 80094917 80095038 -119535112 + Charlie7 DNA MER1_type 2474 2599 -13 2280 101 16 0 chr5 80095389 80095697 -119534453 + AluSq SINE Alu 1 313 0 275 338 65 65 chr5 80095878 80096263 -119533887 + L2 LINE L2 2110 2494 -820 283 258 113 8 chr5 80096305 80096429 -119533721 + L1ME3A LINE L1 5826 5962 -208 2246 114 16 0 chr5 80096473 80096780 -119533370 + AluSx SINE Alu 1 312 0 237 364 45 0 chr5 80097053 80097141 -119533009 + L2 LINE L2 2579 2670 -644 1897 110 4 4 chr5 80097245 80097508 -119532642 + AluSq SINE Alu 49 311 -2 1500 202 56 45 chr5 80098917 80099343 -119530807 - Zaphod DNA AcHobo -12 4019 3589 * 3536 179 69 79 chr5 80099330 80099563 -119530587 - Zaphod DNA AcHobo -626 67 -167 1678 191 24 3 chr5 80099563 80099857 -119530293 - AluJb SINE Alu -12 300 1 3536 179 69 79 chr5 80099857 80100416 -119529734 - Zaphod DNA AcHobo -860 4294967129 210 1655 179 10 26 chr5 80100416 80100729 -119529421 + AluJb SINE Alu 1 308 -4 3536 179 69 79 chr5 80100729 80100936 -119529214 - Zaphod DNA AcHobo -482 211 3 551 265 93 0 chr5 80102008 80102170 -119527980 - MER69A DNA AcHobo 0 177 1 2598 242 74 30 chr5 80102891 80103622 -119526528 + MER21B LTR ERV1 19 781 -82 518 248 30 91 chr5 80103952 80104182 -119525968 - LTR33 LTR ERVL -303 218 3 2206 106 0 23 chr5 80104242 80104545 -119525605 + AluSx SINE Alu 1 296 -16 1694 172 0 101 chr5 80104865 80105191 -119524959 - AluJo SINE Alu -9 293 1 1905 145 37 58 chr5 80106269 80106648 -119523502 - THE1C LTR MaLR -4 371 1 729 265 74 42 chr5 80106693 80107092 -119523058 + MLT1J2 LTR MaLR 7 450 0 422 287 9 9 chr5 80108335 80108450 -119521700 + L2 LINE L2 3157 3271 -1 426 344 0 0 chr5 80108595 80108720 -119521430 + L2 LINE L2 3148 3272 0 950 279 50 71 chr5 80110666 80111171 -119518979 + L2 LINE L2 2815 3308 -5 4281 185 28 20 chr5 80111284 80112149 -119518001 + L1MB8 LINE L1 5304 6334 0 302 317 156 0 chr5 80112149 80112335 -119517815 - L2 LINE L2 -1217 2097 1883 516 247 156 41 chr5 80112358 80112647 -119517503 - LTR16C LTR ERVL -2 489 71 1440 172 247 23 chr5 80113197 80113326 -119516824 + MSTB LTR MaLR 1 100 -326 2166 114 3 0 chr5 80113326 80113616 -119516534 + AluY SINE Alu 5 295 -16 1440 172 247 23 chr5 80113616 80113834 -119516316 + MSTB LTR MaLR 100 426 0 528 24 12 119 chr5 80113850 80113899 -119516251 - MADE1 DNA Mariner 0 80 42 2119 118 3 3 chr5 80113899 80114195 -119515955 + AluSx SINE Alu 1 296 -16 528 24 12 119 chr5 80114195 80114229 -119515921 - MADE1 DNA Mariner -38 42 6 191 323 0 0 chr5 80115277 80115342 -119514808 + L2 LINE L2 3244 3308 -5 1892 139 64 75 chr5 80115695 80116070 -119514080 + THE1C LTR MaLR 1 371 -4 254 351 47 27 chr5 80116456 80116604 -119513546 - L3 LINE CR1 -428 1149 999 213 349 0 0 chr5 80117104 80117170 -119512980 + (CA)n Simple_repeat Simple_repeat 2 67 0 465 314 110 71 chr5 80117196 80117719 -119512431 - L2 LINE L2 -86 3186 2654 869 249 118 48 chr5 80117782 80118196 -119511954 + LTR16C LTR ERVL 49 491 0 1230 251 87 74 chr5 80118293 80118727 -119511423 - MLT1G1 LTR MaLR 0 595 168 1592 142 124 8 chr5 80118727 80118994 -119511156 + AluSg1 SINE Alu 1 298 -11 2378 143 95 5 chr5 80119002 80119393 -119510757 + MSTB LTR MaLR 1 426 0 1230 251 87 74 chr5 80119393 80119476 -119510674 - MLT1G1 LTR MaLR -433 162 62 894 282 67 41 chr5 80120583 80121127 -119509023 - MLT1G LTR MaLR 0 555 1 2748 271 73 38 chr5 80121166 80121197 -119508953 + L1ME LINE L1 464 492 -6229 1986 154 138 31 chr5 80121197 80121587 -119508563 + MSTB1 LTR MaLR 1 432 0 2748 271 73 38 chr5 80121587 80122888 -119507262 + L1ME LINE L1 492 1870 -4851 1968 173 0 3 chr5 80122888 80123194 -119506956 + AluSx SINE Alu 1 305 -7 2748 271 73 38 chr5 80123194 80123229 -119506921 + L1ME LINE L1 1870 1902 -4819 828 185 0 14 chr5 80123231 80123377 -119506773 + AluJo SINE Alu 8 151 -161 462 188 0 0 chr5 80123378 80123494 -119506656 + AluSg/x SINE Alu 213 328 0 393 207 0 78 chr5 80123495 80123611 -119506539 + L1ME LINE L1 1854 1960 -4580 208 277 158 40 chr5 80123936 80124037 -119506113 - MIR SINE MIR -124 138 26 627 288 89 49 chr5 80124379 80124705 -119505445 + MLT1J LTR MaLR 72 410 -101 440 76 0 15 chr5 80124755 80124821 -119505329 + (GGGAA)n Simple_repeat Simple_repeat 2 66 0 231 167 0 0 chr5 80124853 80124895 -119505255 + GA-rich Low_complexity Low_complexity 2 43 0 348 279 56 45 chr5 80124938 80125117 -119505033 + MIR SINE MIR 81 261 -1 184 245 132 19 chr5 80125119 80125172 -119504978 - L2 LINE L2 -47 3266 3208 1302 138 4 83 chr5 80125354 80125608 -119504542 + L1PA15 LINE L1 5930 6163 -2 21 0 0 0 chr5 80125622 80125643 -119504507 + AT_rich Low_complexity Low_complexity 1 21 0 236 175 35 0 chr5 80125683 80125740 -119504410 + (TATG)n Simple_repeat Simple_repeat 2 60 0 591 273 46 31 chr5 80127908 80128102 -119502048 + MIR SINE MIR 2 198 -64 484 286 106 32 chr5 80129048 80129227 -119500923 - MIR3 SINE MIR 0 208 16 414 303 121 12 chr5 80129227 80129392 -119500758 - MER5A DNA MER1_type 0 189 7 545 192 130 113 chr5 80129548 80129615 -119500535 + MER5A DNA MER1_type 10 74 -115 2152 100 0 0 chr5 80129615 80129895 -119500255 + AluY SINE Alu 1 280 -31 545 192 130 113 chr5 80129895 80130004 -119500146 + MER5A DNA MER1_type 74 189 0 1014 216 123 118 chr5 80130031 80130583 -119499567 - MLT1H1 LTR MaLR 0 555 1 289 85 75 11 chr5 80130748 80130842 -119499308 + (CA)n Simple_repeat Simple_repeat 2 101 0 371 169 56 35 chr5 80130845 80130987 -119499163 + (CAG)n Simple_repeat Simple_repeat 2 146 0 246 163 12 50 chr5 80131074 80131154 -119498996 + (CCA)n Simple_repeat Simple_repeat 3 79 0 278 235 15 44 chr5 80131285 80131353 -119498797 + L2 LINE L2 3238 3303 -10 219 351 32 11 chr5 80131511 80131605 -119498545 - L2 LINE L2 -222 3050 2955 1883 138 48 0 chr5 80131879 80132169 -119497981 - AluSx SINE Alu -8 304 1 28 0 0 47 chr5 80133781 80133800 -119496350 + AT_rich Low_complexity Low_complexity 1 19 -22 3203 146 16 0 chr5 80133800 80133964 -119496186 + L1MB5 LINE L1 5660 5820 -354 1996 145 3 13 chr5 80133964 80134267 -119495883 + AluSx SINE Alu 1 300 -12 3203 146 16 0 chr5 80134267 80134601 -119495549 + L1MB5 LINE L1 5820 6166 -8 28 0 0 47 chr5 80134601 80134624 -119495526 + AT_rich Low_complexity Low_complexity 19 41 0 21 0 0 0 chr5 80135077 80135098 -119495052 + AT_rich Low_complexity Low_complexity 1 21 0 190 258 320 10 chr5 80135110 80135207 -119494943 + MER5A DNA MER1_type 56 182 -7 346 239 130 22 chr5 80135600 80135738 -119494412 - MER5B DNA MER1_type -5 173 21 379 234 79 114 chr5 80135755 80135982 -119494168 - L3 LINE CR1 -106 1471 1253 379 284 149 9 chr5 80136008 80136328 -119493822 - L1MDa LINE L1 -3762 2778 2418 1777 105 84 32 chr5 80136581 80136866 -119493284 + AluSq SINE Alu 1 300 -13 23 33 0 0 chr5 80136919 80136949 -119493201 + AT_rich Low_complexity Low_complexity 1 30 0 2250 101 24 3 chr5 80137025 80137323 -119492827 - AluSq SINE Alu -9 304 1 524 300 50 14 chr5 80137331 80137665 -119492485 - L1M2 LINE L1 -4271 2270 1579 3064 173 50 50 chr5 80138089 80138144 -119492006 + L1MD3 LINE L1 6984 7038 -957 1033 146 0 6 chr5 80138144 80138302 -119491848 + L1PB4 LINE L1 5998 6154 -2 3064 173 50 50 chr5 80138302 80138415 -119491735 + L1MD3 LINE L1 7038 7150 -845 283 190 21 2 chr5 80138415 80138476 -119491674 + MLT1F1 LTR MaLR 69 122 -445 3064 173 50 50 chr5 80138476 80139063 -119491087 + L1MD3 LINE L1 7150 7995 0 3125 148 25 11 chr5 80139066 80139587 -119490563 + L1MB5 LINE L1 5647 6174 0 1878 138 31 3 chr5 80139599 80139889 -119490261 + AluJb SINE Alu 1 298 -14 353 317 33 8 chr5 80140242 80140362 -119489788 + L2 LINE L2 3191 3313 0 381 329 52 5 chr5 80140980 80141190 -119488960 + MIR SINE MIR 3 222 -40 1986 137 10 0 chr5 80141288 80141587 -119488563 + AluSq SINE Alu 1 302 -11 1004 157 6 0 chr5 80141734 80141940 -119488210 + FAM SINE Alu 1 96 0 209 143 43 0 chr5 80141893 80142169 -119487981 + GA-rich Low_complexity Low_complexity 1 287 0 * 28 0 0 0 chr5 80142397 80142425 -119487725 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 80144681 80144705 -119485445 + AT_rich Low_complexity Low_complexity 1 24 0 29 28 0 0 chr5 80145167 80145203 -119484947 + AT_rich Low_complexity Low_complexity 1 36 0 2321 103 0 0 chr5 80145249 80145549 -119484601 + AluSc SINE Alu 1 300 -9 767 287 45 8 chr5 80146262 80146663 -119483487 - LTR16A LTR ERVL 0 450 1 2081 103 35 0 chr5 80147588 80147870 -119482280 + AluY SINE Alu 1 292 -19 1535 225 59 46 chr5 80148111 80148502 -119481648 + MSTD LTR MaLR 1 396 0 408 259 53 15 chr5 80148785 80148916 -119481234 - MIR SINE MIR -59 203 68 240 253 20 81 chr5 80148977 80149076 -119481074 - MIR3 SINE MIR -4 204 112 2232 94 16 13 chr5 80150248 80150555 -119479595 - AluSx SINE Alu -3 309 2 275 252 180 9 chr5 80150634 80150745 -119479405 + MIR SINE MIR 133 262 0 2128 116 0 20 chr5 80150956 80151259 -119478891 - AluSx SINE Alu -15 297 1 1843 151 25 7 chr5 80151958 80152243 -119477907 + AluSx SINE Alu 1 290 -22 24 32 0 0 chr5 80152247 80152278 -119477872 + AT_rich Low_complexity Low_complexity 1 31 0 600 336 31 7 chr5 80152501 80152787 -119477363 + L3 LINE CR1 695 987 -590 1154 194 169 28 chr5 80153154 80153474 -119476676 + MER20B DNA MER1_type 164 528 -255 1828 136 7 7 chr5 80153573 80153845 -119476305 + AluJb SINE Alu 24 295 -17 210 261 0 0 chr5 80153977 80154023 -119476127 + CT-rich Low_complexity Low_complexity 3 48 0 2137 127 0 10 chr5 80154103 80154417 -119475733 - AluJb SINE Alu 0 312 2 745 259 45 8 chr5 80158191 80158438 -119471712 + L1ME4a LINE L1 5545 5800 -321 309 147 284 10 chr5 80158507 80158609 -119471541 + L1ME4a LINE L1 5991 6120 -1 217 274 71 24 chr5 80160385 80160469 -119469681 + L2 LINE L2 3145 3232 -40 183 253 0 114 chr5 80160579 80160658 -119469492 - MIR3 SINE MIR -11 197 128 670 192 62 22 chr5 80160950 80161132 -119469018 + MIR SINE MIR 3 191 -62 2551 69 0 0 chr5 80161219 80161524 -119468626 + AluY SINE Alu 1 305 -6 366 246 0 0 chr5 80162336 80162401 -119467749 - L2 LINE L2 -3 3269 3205 2114 135 3 0 chr5 80162588 80162892 -119467258 + AluJo SINE Alu 1 305 -7 1992 133 49 75 chr5 80163743 80164128 -119466022 - THE1C LTR MaLR 0 375 1 1064 51 0 43 chr5 80164233 80164371 -119465779 + AluY SINE Alu 1 132 -179 2228 101 3 7 chr5 80164385 80164692 -119465458 + AluY SINE Alu 1 306 -5 2297 112 0 0 chr5 80164965 80165269 -119464881 + AluSx SINE Alu 1 304 -8 220 247 12 106 chr5 80165508 80165593 -119464557 - MER5A DNA MER1_type -11 178 102 2216 98 0 55 chr5 80165994 80166321 -119463829 + AluSg SINE Alu 1 309 -1 302 302 9 38 chr5 80167342 80167448 -119462702 + MIR3 SINE MIR 83 185 -23 26 0 0 0 chr5 80169941 80169967 -119460183 + GC_rich Low_complexity Low_complexity 1 26 0 1994 109 3 7 chr5 80170928 80171242 -119458908 - AluSx SINE Alu 0 313 1 838 165 0 23 chr5 80171246 80171379 -119458771 - AluSq/x SINE Alu -179 133 4 270 136 0 0 chr5 80171480 80171524 -119458626 + (GAAAA)n Simple_repeat Simple_repeat 3 46 0 1794 147 31 10 chr5 80173855 80174147 -119456003 - AluSx SINE Alu -14 298 1 2490 65 0 0 chr5 80174589 80174899 -119455251 + AluY SINE Alu 2 311 0 186 43 0 0 chr5 80177368 80177391 -119452759 + (TC)n Simple_repeat Simple_repeat 2 24 0 216 0 0 0 chr5 80177393 80177417 -119452733 + (TG)n Simple_repeat Simple_repeat 2 25 0 2098 144 0 13 chr5 80177590 80177903 -119452247 + AluJb SINE Alu 1 309 -3 2229 171 0 6 chr5 80178399 80178738 -119451412 - MER1B DNA MER1_type 0 337 1 2128 175 62 58 chr5 80178744 80179247 -119450903 - MLT1D LTR MaLR 0 505 1 1686 184 145 22 chr5 80179263 80179667 -119450483 - L1MB7 LINE L1 0 6184 5725 1018 217 96 17 chr5 80179675 80180018 -119450132 - L1MB7 LINE L1 -573 5593 5204 2984 89 0 5 chr5 80180120 80180503 -119449647 + L1PA13 LINE L1 5782 6162 -1 1615 147 3 87 chr5 80182919 80183253 -119446897 - AluJb SINE Alu -6 306 1 207 245 143 31 chr5 80183262 80183360 -119446790 + L2 LINE L2 3162 3270 -43 1971 120 0 30 chr5 80184060 80184360 -119445790 + AluSg SINE Alu 1 291 -19 22 0 0 0 chr5 80185768 80185790 -119444360 + AT_rich Low_complexity Low_complexity 1 22 0 328 273 53 27 chr5 80185923 80186073 -119444077 + MIR SINE MIR 31 184 -78 21 0 0 0 chr5 80186147 80186168 -119443982 + AT_rich Low_complexity Low_complexity 1 21 0 219 69 0 0 chr5 80186541 80186570 -119443580 + (TA)n Simple_repeat Simple_repeat 1 29 0 215 238 0 0 chr5 80186663 80186705 -119443445 + (CATA)n Simple_repeat Simple_repeat 2 43 0 298 188 58 72 chr5 80187756 80187894 -119442256 - Charlie7 DNA MER1_type -69 2543 2408 2445 83 3 0 chr5 80194667 80194969 -119435181 - AluSx SINE Alu -9 303 1 2233 105 3 10 chr5 80194990 80195294 -119434856 - AluSc SINE Alu -7 302 1 1781 165 94 3 chr5 80195557 80195866 -119434284 - MER1B DNA MER1_type 0 337 1 1944 157 3 0 chr5 80196977 80197282 -119432868 - AluJo SINE Alu -5 307 2 713 246 135 10 chr5 80203115 80203322 -119426828 - MIR SINE MIR -1 261 29 1921 157 7 16 chr5 80206210 80206515 -119423635 + AluJo SINE Alu 1 302 -10 429 340 13 6 chr5 80207344 80207503 -119422647 + MER5A DNA MER1_type 9 168 -21 2277 92 3 10 chr5 80208080 80208384 -119421766 - AluSx SINE Alu -10 302 1 2032 155 0 3 chr5 80210074 80210383 -119419767 - AluJo SINE Alu -4 308 1 2469 54 7 0 chr5 80210922 80211218 -119418932 + AluY SINE Alu 3 300 -11 328 273 18 36 chr5 80211443 80211553 -119418597 - MIR SINE MIR -60 148 41 22 0 0 0 chr5 80212379 80212401 -119417749 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 80215357 80215378 -119414772 + AT_rich Low_complexity Low_complexity 1 21 0 270 0 0 0 chr5 80215710 80215740 -119414410 + (CA)n Simple_repeat Simple_repeat 2 31 0 510 278 113 10 chr5 80218612 80218858 -119411292 - MLT1L LTR MaLR -18 597 245 200 349 178 7 chr5 80219210 80219356 -119410794 - L2 LINE L2 0 3272 3102 413 250 22 37 chr5 80219512 80219648 -119410502 - MER94 DNA DNA 0 134 1 342 322 74 13 chr5 80219691 80219840 -119410310 - L2 LINE L2 -556 2758 2601 658 259 58 11 chr5 80219885 80220059 -119410091 - MIR SINE MIR -77 185 4 945 217 0 0 chr5 80220334 80220500 -119409650 + FRAM SINE Alu 1 166 0 248 204 28 133 chr5 80221393 80221435 -119408715 + Charlie7 DNA MER1_type 2424 2469 -143 1918 139 0 33 chr5 80221435 80221599 -119408551 - AluJb SINE Alu -21 291 140 2358 90 7 0 chr5 80221599 80221900 -119408250 - AluSx SINE Alu -9 303 1 1918 139 0 33 chr5 80221900 80222036 -119408114 - AluJb SINE Alu -172 140 1 248 204 28 133 chr5 80222036 80222204 -119407946 + Charlie7 DNA MER1_type 2469 2612 0 755 297 24 54 chr5 80222476 80222884 -119407266 + MLT1J LTR MaLR 58 492 -19 185 330 143 0 chr5 80223451 80223542 -119406608 + MIR SINE MIR 93 196 -66 483 286 125 29 chr5 80223585 80224406 -119405744 - L1ME LINE L1 -330 5791 4862 274 258 147 10 chr5 80224531 80224729 -119405421 - L1ME LINE L1 -1445 4701 4477 2264 99 3 0 chr5 80224881 80225184 -119404966 + AluSx SINE Alu 1 304 -8 22 35 0 0 chr5 80225184 80225213 -119404937 + AT_rich Low_complexity Low_complexity 1 29 0 1881 94 59 31 chr5 80225213 80225500 -119404650 + AluSg SINE Alu 1 295 -15 363 295 20 20 chr5 80225502 80225651 -119404499 - L1ME LINE L1 -1945 4201 4053 240 86 0 0 chr5 80226421 80226456 -119403694 + (CA)n Simple_repeat Simple_repeat 1 35 0 22 35 0 0 chr5 80226682 80226711 -119403439 + AT_rich Low_complexity Low_complexity 1 29 0 724 165 0 24 chr5 80226711 80226838 -119403312 - FLAM_C SINE Alu -8 125 2 1068 152 12 0 chr5 80227173 80227338 -119402812 - FAM SINE Alu -7 168 2 318 213 137 123 chr5 80227456 80227734 -119402416 - HAL1 LINE L1 -943 1564 1276 1645 188 3 14 chr5 80227734 80228016 -119402134 - AluJo SINE Alu -32 280 2 318 213 137 123 chr5 80228016 80228183 -119401967 - HAL1 LINE L1 -1231 1276 1113 22 35 0 0 chr5 80232699 80232728 -119397422 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 80234467 80234496 -119395654 + AT_rich Low_complexity Low_complexity 1 29 0 518 265 19 47 chr5 80235095 80235306 -119394844 - Charlie8 DNA MER1_type -2141 276 72 1404 69 32 0 chr5 80235391 80235579 -119394571 + MER30 DNA MER1_type 1 194 -36 2579 48 0 10 chr5 80236531 80236845 -119393305 + AluY SINE Alu 1 311 0 2407 77 3 0 chr5 80238030 80238327 -119391823 + AluSp SINE Alu 1 298 -15 1847 139 0 7 chr5 80238331 80238636 -119391514 + AluJb SINE Alu 20 322 0 595 94 0 0 chr5 80238843 80238928 -119391222 - AluSc SINE Alu -3 306 222 1659 169 27 7 chr5 80239277 80239573 -119390577 - AluJo SINE Alu -10 302 1 1525 185 27 7 chr5 80240175 80240467 -119389683 - AluSx SINE Alu -14 298 1 2086 157 0 0 chr5 80242136 80242448 -119387702 + AluSx SINE Alu 1 312 0 860 204 129 15 chr5 80242903 80243104 -119387046 + MER58A DNA MER1_type 1 224 0 2127 127 0 24 chr5 80243181 80243512 -119386638 + MER1B DNA MER1_type 4 326 -13 1523 200 123 36 chr5 80243525 80243742 -119386408 + LTR40a LTR ERVL 40 237 -282 7072 52 17 9 chr5 80243742 80244722 -119385428 - L1PA7 LINE L1 -2 6152 5170 1523 200 123 36 chr5 80244722 80244944 -119385206 + LTR40a LTR ERVL 237 517 -2 253 319 222 0 chr5 80245009 80245081 -119385069 + MER91A DNA MER1_type 4 91 -105 342 203 27 0 chr5 80246027 80246101 -119384049 - MER116 DNA Mariner 0 80 5 243 294 103 24 chr5 80246416 80246542 -119383608 - L2 LINE L2 0 3272 3137 745 271 162 81 chr5 80246666 80246868 -119383282 + L2 LINE L2 2543 2727 -586 731 85 19 0 chr5 80246868 80246974 -119383176 + L1PA15 LINE L1 6058 6165 0 745 271 162 81 chr5 80246974 80247354 -119382796 + L2 LINE L2 2727 3189 -124 26 0 0 0 chr5 80249291 80249317 -119380833 + AT_rich Low_complexity Low_complexity 1 26 0 1376 210 89 3 chr5 80249384 80249698 -119380452 + MER58B DNA MER1_type 1 341 0 23 33 0 0 chr5 80250378 80250408 -119379742 + AT_rich Low_complexity Low_complexity 1 30 0 2408 98 3 0 chr5 80250437 80250744 -119379406 + AluSg SINE Alu 1 308 -2 330 320 29 74 chr5 80250947 80251122 -119379028 + MIR SINE MIR 14 180 -82 257 374 70 11 chr5 80251224 80251510 -119378640 - L2 LINE L2 -2534 780 478 381 22 0 0 chr5 80252050 80252096 -119378054 + (CA)n Simple_repeat Simple_repeat 2 47 0 481 276 24 44 chr5 80253224 80253415 -119376735 + MIR SINE MIR 24 208 -54 28 0 0 0 chr5 80255147 80255175 -119374975 + AT_rich Low_complexity Low_complexity 1 28 0 2382 69 0 0 chr5 80255257 80255548 -119374602 + AluSg SINE Alu 1 291 -19 1533 184 145 44 chr5 80256001 80256457 -119373693 + MLT1D LTR MaLR 2 503 -2 200 211 0 0 chr5 80260713 80260751 -119369399 - L2 LINE L2 -16 3256 3219 4940 219 50 56 chr5 80261948 80264106 -119366044 + L1PA10 LINE L1 10 2179 -4282 17968 125 11 4 chr5 80264106 80265077 -119365073 + L1PA10 LINE L1 2605 3568 -2915 2069 133 7 0 chr5 80265077 80265377 -119364773 + AluSp SINE Alu 1 302 -11 17968 125 11 4 chr5 80265377 80267162 -119362988 + L1PA10 LINE L1 3568 5336 -1147 2281 101 0 0 chr5 80267162 80267459 -119362691 + AluSx SINE Alu 5 301 -11 17968 125 11 4 chr5 80267459 80268612 -119361538 + L1PA10 LINE L1 5336 6480 -3 241 255 0 0 chr5 80268701 80268752 -119361398 - L2 LINE L2 -1 3271 3221 203 261 138 15 chr5 80268900 80268965 -119361185 - MIR3 SINE MIR -6 202 130 768 201 118 55 chr5 80269112 80269509 -119360641 - L1MC5 LINE L1 -44 7917 7496 2417 97 0 0 chr5 80269743 80270053 -119360097 - AluSg SINE Alu 0 310 1 31 44 0 0 chr5 80270691 80270736 -119359414 + AT_rich Low_complexity Low_complexity 1 45 0 24 0 0 0 chr5 80270756 80270780 -119359370 + AT_rich Low_complexity Low_complexity 1 24 0 2044 94 58 0 chr5 80271702 80271977 -119358173 + AluSp SINE Alu 3 293 -20 180 338 54 0 chr5 80273262 80273336 -119356814 + L2 LINE L2 3171 3248 -65 404 217 16 62 chr5 80273449 80273578 -119356572 + MER77 LTR ERV1 80 202 -403 1026 267 100 69 chr5 80273617 80274098 -119356052 + MER77 LTR ERV1 154 708 -7 241 327 50 69 chr5 80274647 80274806 -119355344 + L2 LINE L2 2892 3047 -225 254 323 84 24 chr5 80275130 80275297 -119354853 + L2 LINE L2 2251 2427 -887 378 347 153 21 chr5 80275551 80275877 -119354273 + L2 LINE L2 2903 3271 -1 1897 147 4 0 chr5 80277063 80277342 -119352808 - AluJb SINE Alu -32 280 1 337 256 128 8 chr5 80277360 80277485 -119352665 - L1ME3A LINE L1 -304 5866 5727 219 69 0 0 chr5 80277487 80277516 -119352634 + (T)n Simple_repeat Simple_repeat 1 29 0 225 0 0 0 chr5 80277657 80277682 -119352468 + (T)n Simple_repeat Simple_repeat 1 25 0 2471 27 41 7 chr5 80278335 80278630 -119351520 - AluY SINE Alu -5 306 2 372 339 41 31 chr5 80279512 80279707 -119350443 - MIR SINE MIR -65 197 1 2385 75 0 3 chr5 80279856 80280151 -119349999 - AluSq SINE Alu -19 294 1 23 54 0 0 chr5 80280725 80280762 -119349388 + AT_rich Low_complexity Low_complexity 1 37 0 288 297 195 8 chr5 80281114 80281242 -119348908 - MIR3 SINE MIR -3 205 54 1378 104 10 147 chr5 80281287 80281586 -119348564 + AluJb SINE Alu 55 312 0 602 266 83 38 chr5 80281697 80282419 -119347731 - L1ME4a LINE L1 -4 6117 5318 1014 192 36 9 chr5 80282426 80282645 -119347505 - L1ME3A LINE L1 -9 6161 5937 25 83 0 0 chr5 80282660 80282720 -119347430 + AT_rich Low_complexity Low_complexity 1 60 0 818 302 36 4 chr5 80283354 80283606 -119346544 - MIR SINE MIR 0 262 3 1173 212 150 99 chr5 80283651 80284245 -119345905 + MER20B DNA MER1_type 90 713 -70 798 261 99 0 chr5 80284884 80285106 -119345044 - MIR SINE MIR 0 262 19 22 0 0 0 chr5 80286266 80286288 -119343862 + AT_rich Low_complexity Low_complexity 1 22 0 370 284 39 24 chr5 80287087 80287214 -119342936 + L2 LINE L2 2694 2822 -492 550 239 157 0 chr5 80287227 80287386 -119342764 + MER3 DNA MER1_type 19 202 -7 1200 164 139 50 chr5 80287840 80288121 -119342029 - AluJo SINE Alu -6 306 1 221 211 88 19 chr5 80288982 80289073 -119341077 - MIR SINE MIR -79 129 38 624 269 77 69 chr5 80289540 80289700 -119340450 + L1ME LINE L1 5416 5573 -548 1666 173 18 7 chr5 80289700 80289984 -119340166 - AluJo SINE Alu -25 287 1 624 269 77 69 chr5 80289984 80290223 -119339927 + L1ME LINE L1 5573 5777 -344 837 204 13 6 chr5 80290229 80290386 -119339764 - AluJb SINE Alu -14 298 141 878 280 25 21 chr5 80290769 80291008 -119339142 - MIR SINE MIR -21 241 2 265 348 116 67 chr5 80291630 80291707 -119338443 + L2 LINE L2 2911 2983 -289 2202 127 0 0 chr5 80291707 80292015 -119338135 - AluSx SINE Alu -4 308 1 265 348 116 67 chr5 80292015 80292282 -119337868 + L2 LINE L2 2983 3272 0 205 310 147 9 chr5 80292691 80292807 -119337343 + L2 LINE L2 3115 3246 -26 7585 50 5 30 chr5 80293039 80294563 -119335587 + SVA Other Other 16 1385 -1 641 286 196 22 chr5 80294982 80295209 -119334941 - L2 LINE L2 -1 3312 3126 1487 212 73 12 chr5 80295209 80295553 -119334597 + MLT1A1 LTR MaLR 1 365 0 641 286 196 22 chr5 80295553 80295831 -119334319 - L2 LINE L2 -187 3126 2709 1847 111 41 15 chr5 80295885 80296155 -119333995 + AluY SINE Alu 5 281 -30 480 224 82 14 chr5 80296168 80296334 -119333816 - L1MC/D LINE L1 -489 5632 5457 327 272 61 41 chr5 80296652 80296799 -119333351 - L1MC/D LINE L1 -2121 5687 5538 318 328 60 9 chr5 80298243 80298359 -119331791 - L2 LINE L2 0 3313 3192 21 0 0 0 chr5 80298543 80298564 -119331586 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 80301652 80301673 -119328477 + AT_rich Low_complexity Low_complexity 1 21 0 1871 145 3 3 chr5 80302443 80302756 -119327394 + AluJb SINE Alu 1 313 0 244 173 58 0 chr5 80304225 80304277 -119325873 - MIR SINE MIR -96 166 112 261 106 0 0 chr5 80306958 80307005 -119323145 + MER4B-int LTR ERV1 1150 1196 -5562 273 182 0 0 chr5 80307005 80307060 -119323090 + (TA)n Simple_repeat Simple_repeat 1 55 0 1681 160 68 0 chr5 80307060 80307323 -119322827 - AluJb SINE Alu -29 283 3 24 0 0 0 chr5 80307328 80307352 -119322798 + AT_rich Low_complexity Low_complexity 1 24 0 572 336 54 79 chr5 80307573 80307927 -119322223 - L2 LINE L2 -1 3271 2927 635 289 67 29 chr5 80308020 80308259 -119321891 - MIR SINE MIR -14 248 1 790 269 35 31 chr5 80311096 80311323 -119318827 + MIR SINE MIR 16 243 -19 195 309 12 48 chr5 80311735 80311819 -119318331 - MIR3 SINE MIR -11 197 117 189 171 0 0 chr5 80312872 80312907 -119317243 + A-rich Low_complexity Low_complexity 1 35 0 894 236 167 72 chr5 80312951 80313435 -119316715 + L2 LINE L2 2447 2976 -338 351 306 14 21 chr5 80313436 80313580 -119316570 + L2 LINE L2 3095 3237 -76 2278 104 0 0 chr5 80313581 80313878 -119316272 - AluSx SINE Alu -15 297 1 229 226 0 38 chr5 80314288 80314341 -119315809 + MER5B DNA MER1_type 2 52 -126 268 271 31 42 chr5 80314371 80314467 -119315683 - MER5B DNA MER1_type -47 131 37 35547 40 4 6 chr5 80314467 80318948 -119311202 + L1PA4 LINE L1 1 4473 -1673 7212 30 7 10 chr5 80319084 80320695 -119309455 + L1PA4 LINE L1 4548 6155 0 188 283 0 0 chr5 80320715 80320761 -119309389 - MER5B DNA MER1_type -131 47 2 1048 163 6 0 chr5 80320769 80320941 -119309209 + FRAM SINE Alu 1 173 -3 231 36 0 0 chr5 80321385 80321413 -119308737 + (GAAAA)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr5 80321588 80321610 -119308540 + AT_rich Low_complexity Low_complexity 1 22 0 2237 115 0 3 chr5 80322566 80322870 -119307280 + AluSx SINE Alu 1 303 -9 594 299 37 5 chr5 80323132 80323319 -119306831 + MIR SINE MIR 19 211 -51 314 253 131 0 chr5 80325849 80325948 -119304202 - MIR SINE MIR -105 157 46 323 168 0 84 chr5 80325948 80326043 -119304107 - L1MB3 LINE L1 -80 6103 6017 1880 276 16 33 chr5 80326067 80326701 -119303449 - L1ME LINE L1 -5414 656 34 26 0 0 0 chr5 80326724 80326750 -119303400 + AT_rich Low_complexity Low_complexity 1 26 0 2052 117 10 13 chr5 80327159 80327458 -119302692 + AluSx SINE Alu 1 298 -14 2102 115 7 0 chr5 80327681 80327967 -119302183 + AluSx SINE Alu 17 304 -8 225 250 62 10 chr5 80329072 80329168 -119300982 + (CAGAGA)n Simple_repeat Simple_repeat 4 104 0 2014 172 3 35 chr5 80329662 80330035 -119300115 - MLT1A1 LTR MaLR 0 365 5 662 250 29 0 chr5 80330945 80331085 -119299065 + MER58B DNA MER1_type 198 341 0 402 300 67 39 chr5 80331093 80331273 -119298877 - MER5A DNA MER1_type 0 189 5 387 260 40 0 chr5 80332898 80332998 -119297152 + MIR SINE MIR 155 258 -4 180 0 0 0 chr5 80333638 80333658 -119296492 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2234 91 0 7 chr5 80334356 80334665 -119295485 + AluSq SINE Alu 1 307 0 1693 61 5 0 chr5 80335028 80335242 -119294908 - AluY SINE Alu -2 309 95 1741 178 18 0 chr5 80436990 80437271 -119192879 - AluJo SINE Alu -26 286 1 333 85 21 0 chr5 80437383 80437430 -119192720 + MER33 DNA MER1_type 39 86 -238 274 323 10 61 chr5 80438025 80438124 -119192026 + MIR SINE MIR 23 116 -92 24 0 0 0 chr5 80438130 80438154 -119191996 + AT_rich Low_complexity Low_complexity 1 24 0 689 191 32 0 chr5 80438191 80438317 -119191833 - FLAM_C SINE Alu -2 131 2 252 379 98 17 chr5 80438531 80438887 -119191263 + L2 LINE L2 2355 2739 -575 269 79 0 0 chr5 80438987 80439025 -119191125 - L1MC2 LINE L1 -37 6307 6270 1934 221 99 51 chr5 80439239 80439805 -119190345 - MLT1E LTR MaLR 0 593 1 2090 113 10 3 chr5 80439915 80440225 -119189925 + L1MC1 LINE L1 6011 6322 -11 1986 242 84 45 chr5 80440257 80440897 -119189253 - L2 LINE L2 -948 2366 1702 2690 183 39 0 chr5 80440899 80441435 -119188715 + L1MB7 LINE L1 4749 5305 -841 977 174 0 0 chr5 80441438 80441587 -119188563 + AluSq/x SINE Alu 1 149 -163 2280 160 143 8 chr5 80441602 80442071 -119188079 + L1MB7 LINE L1 5341 5872 -312 9039 202 59 42 chr5 80442086 80442161 -119187989 - L1MC1 LINE L1 -148 6465 6393 924 223 0 0 chr5 80442161 80442327 -119187823 - FRAM SINE Alu 0 166 1 9039 202 59 42 chr5 80442327 80442340 -119187810 - L1MC1 LINE L1 -220 6393 6382 2314 80 26 3 chr5 80442340 80442642 -119187508 - AluSx SINE Alu -3 309 1 9039 202 59 42 chr5 80442642 80443754 -119186396 - L1MC1 LINE L1 -231 6382 5290 592 207 26 0 chr5 80443754 80443870 -119186280 - FLAM_A SINE Alu -10 132 14 9039 202 59 42 chr5 80443870 80446663 -119183487 - L1MC1 LINE L1 -1323 5290 2272 1912 121 34 24 chr5 80446663 80446960 -119183190 - AluSx SINE Alu -12 300 1 9039 202 59 42 chr5 80446960 80447307 -119182843 - L1MC1 LINE L1 -4341 2272 1932 1421 154 57 74 chr5 80447307 80447426 -119182724 + AluJo SINE Alu 6 125 -187 225 0 0 0 chr5 80447426 80447451 -119182699 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 1421 154 57 74 chr5 80447451 80447473 -119182677 + AluJo SINE Alu 125 146 -166 2197 98 50 0 chr5 80447473 80447770 -119182380 + AluSx SINE Alu 1 312 0 1421 154 57 74 chr5 80447770 80447926 -119182224 + AluJo SINE Alu 146 299 -13 421 174 33 0 chr5 80447930 80448022 -119182128 - L1MC1 LINE L1 -4504 1922 1828 25 0 0 0 chr5 80448024 80448049 -119182101 + AT_rich Low_complexity Low_complexity 1 25 0 1132 164 27 0 chr5 80448056 80448239 -119181911 - AluJo SINE Alu -124 188 1 3729 189 58 9 chr5 80448257 80449020 -119181130 - L1MC1 LINE L1 -5607 819 20 818 294 131 32 chr5 80449020 80449556 -119180594 + L2 LINE L2 2740 3313 0 417 259 18 114 chr5 80450046 80450212 -119179938 - MER5A DNA MER1_type -5 184 35 379 333 37 0 chr5 80450460 80450595 -119179555 - L3 LINE CR1 -117 1460 1321 22 0 0 0 chr5 80450632 80450654 -119179496 + AT_rich Low_complexity Low_complexity 1 22 0 235 247 112 11 chr5 80451214 80451303 -119178847 - HAL1 LINE L1 -906 1601 1504 684 263 144 98 chr5 80451470 80451975 -119178175 - L1MEd LINE L1 -4887 1232 752 2593 96 8 6 chr5 80451975 80452338 -119177812 - THE1B LTR MaLR 0 364 1 684 263 144 98 chr5 80452338 80452513 -119177637 - L1MEd LINE L1 -5367 752 586 1700 181 7 4 chr5 80452513 80452819 -119177331 - AluJb SINE Alu 0 307 1 684 263 144 98 chr5 80452819 80453051 -119177099 - L1MEd LINE L1 -5533 586 276 21 0 0 0 chr5 80453183 80453204 -119176946 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 80453296 80453317 -119176833 + AT_rich Low_complexity Low_complexity 1 21 0 258 136 0 0 chr5 80453330 80453374 -119176776 + (CA)n Simple_repeat Simple_repeat 2 45 0 6242 85 31 3 chr5 80454038 80455199 -119174951 - L1PA11 LINE L1 0 6174 5008 886 260 168 36 chr5 80455358 80456040 -119174110 - L1ME4a LINE L1 -82 6039 5282 777 246 84 97 chr5 80456502 80457337 -119172813 - L1ME LINE L1 -674 5492 4670 2033 132 3 3 chr5 80457337 80457633 -119172517 - AluSx SINE Alu -16 296 1 777 246 84 97 chr5 80457633 80457670 -119172480 - L1ME LINE L1 -1496 4670 4634 336 268 21 28 chr5 80457813 80457955 -119172195 + T-rich Low_complexity Low_complexity 4 144 0 23 0 0 0 chr5 80457975 80457998 -119172152 + AT_rich Low_complexity Low_complexity 1 23 0 2235 120 0 0 chr5 80458186 80458495 -119171655 - AluSg SINE Alu -1 309 1 240 204 74 0 chr5 80458561 80458615 -119171535 - L1MC/D LINE L1 -2014 5794 5737 2341 94 3 0 chr5 80458868 80459167 -119170983 - AluSx SINE Alu -12 300 1 530 242 130 27 chr5 80461477 80461700 -119168450 - MIR SINE MIR -6 256 11 21 0 0 0 chr5 80463862 80463883 -119166267 + AT_rich Low_complexity Low_complexity 1 21 0 29 70 0 0 chr5 80463917 80463974 -119166176 + AT_rich Low_complexity Low_complexity 1 57 0 1302 120 0 0 chr5 80463994 80464169 -119165981 - AluSg/x SINE Alu -16 294 120 187 359 66 19 chr5 80464590 80464696 -119165454 - MIR3 SINE MIR -19 189 79 312 236 34 11 chr5 80466615 80466704 -119163446 + MER103 DNA DNA 16 106 -60 354 98 0 0 chr5 80467023 80467074 -119163076 + (CA)n Simple_repeat Simple_repeat 2 52 0 245 269 15 0 chr5 80467205 80467272 -119162878 + GA-rich Low_complexity Low_complexity 5 72 0 214 171 0 0 chr5 80467434 80467475 -119162675 + T-rich Low_complexity Low_complexity 3 43 0 2080 89 3 98 chr5 80467870 80468197 -119161953 - AluSq SINE Alu -17 296 1 2074 123 36 3 chr5 80468469 80468770 -119161380 + AluSx SINE Alu 1 311 -1 26 30 0 0 chr5 80469513 80469546 -119160604 + AT_rich Low_complexity Low_complexity 1 33 0 249 221 10 48 chr5 80469723 80469797 -119160353 - L1MB8 LINE L1 0 6178 6108 195 42 0 0 chr5 80469797 80469821 -119160329 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 5783 64 25 2 chr5 80469821 80470632 -119159518 - L1PA8 LINE L1 -24 6148 5320 3114 202 49 106 chr5 80470627 80471044 -119159106 - L1MB8 LINE L1 -62 6927 6488 * 2034 166 29 60 chr5 80471044 80471490 -119158660 - MSTB1 LTR MaLR 0 432 1 3114 202 49 106 chr5 80471490 80473577 -119156573 - L1MB8 LINE L1 -501 6488 4576 263 259 25 0 chr5 80473643 80473724 -119156426 - L1MB8 LINE L1 -6628 231 149 38 111 0 0 chr5 80473836 80474007 -119156143 + AT_rich Low_complexity Low_complexity 1 171 0 284 243 0 0 chr5 80474011 80474085 -119156065 - HAL1 LINE L1 -368 2139 2066 489 170 47 19 chr5 80474769 80474875 -119155275 + Charlie1 DNA MER1_type 2343 2451 -310 280 132 38 0 chr5 80474927 80474980 -119155170 - L1MCc LINE L1 -3446 3495 3441 1534 243 50 104 chr5 80475120 80475547 -119154603 - L1MCc LINE L1 -4094 3028 2580 1961 131 41 22 chr5 80475547 80475913 -119154237 - L1MA2 LINE L1 0 6304 5932 1534 243 50 104 chr5 80475913 80477594 -119152556 - L1MCc LINE L1 -4542 2580 822 322 282 24 24 chr5 80477825 80477995 -119152155 - L1MCc LINE L1 -5993 430 261 222 65 43 22 chr5 80478231 80478277 -119151873 + CT-rich Low_complexity Low_complexity 3 49 0 380 104 0 30 chr5 80478856 80478923 -119151227 - MER49 LTR ERV1 -11 912 848 6925 53 16 5 chr5 80478952 80480138 -119150012 - L1PA6 LINE L1 0 6154 4956 37119 79 13 2 chr5 80480240 80485612 -119144538 - L1P2 LINE L1 -719 5435 13 1829 120 7 74 chr5 80485816 80486125 -119144025 + AluSx SINE Alu 5 292 -20 1839 184 3 0 chr5 80486128 80486427 -119143723 + AluJb SINE Alu 1 300 -12 1951 126 41 0 chr5 80486546 80486839 -119143311 - AluSx SINE Alu -7 305 1 2344 98 0 22 chr5 80487205 80487521 -119142629 + AluY SINE Alu 1 309 -2 566 250 120 0 chr5 80487554 80487731 -119142419 + MIR SINE MIR 63 262 0 1661 198 19 7 chr5 80487928 80488236 -119141914 - AluJo SINE Alu 0 312 1 2449 121 8 6 chr5 80488501 80488864 -119141286 - THE1B LTR MaLR 0 364 1 558 274 148 18 chr5 80489067 80489290 -119140860 - MIR SINE MIR -3 259 8 2188 140 21 0 chr5 80491123 80491452 -119138698 + MER1B DNA MER1_type 2 337 0 1395 251 40 12 chr5 80491498 80492017 -119138133 + L1ME1 LINE L1 4654 5187 -959 185 150 0 25 chr5 80492018 80492058 -119138092 + (TCC)n Simple_repeat Simple_repeat 1 39 0 589 220 7 35 chr5 80492059 80492200 -119137950 - FLAM_C SINE Alu -1 142 6 2687 203 68 57 chr5 80492206 80492593 -119137557 + L1ME1 LINE L1 5174 5555 -779 2385 90 3 10 chr5 80492593 80492904 -119137246 + AluSp SINE Alu 1 309 -4 2687 203 68 57 chr5 80492904 80493510 -119136640 + L1ME1 LINE L1 5555 6334 0 180 111 0 0 chr5 80493774 80493801 -119136349 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 21 82 0 0 chr5 80494002 80494051 -119136099 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr5 80494830 80494851 -119135299 + AT_rich Low_complexity Low_complexity 1 21 0 3056 166 38 20 chr5 80495111 80495521 -119134629 - L1MD1 LINE L1 0 6242 5841 252 0 0 0 chr5 80495521 80495549 -119134601 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 1810 148 11 0 chr5 80495549 80495826 -119134324 - AluSx SINE Alu -32 280 1 3056 166 38 20 chr5 80495826 80496051 -119134099 - L1MD1 LINE L1 -400 5842 5595 39219 33 29 2 chr5 80496057 80502040 -119128110 - L1PA2 LINE L1 -2 6153 2 1378 142 151 6 chr5 80502040 80502387 -119127763 - L1MD1 LINE L1 -634 5608 5215 2156 102 14 0 chr5 80502433 80502717 -119127433 + AluSg SINE Alu 1 288 -22 840 228 78 14 chr5 80502796 80503015 -119127135 + MIR SINE MIR 29 261 -1 4859 156 40 44 chr5 80503587 80504572 -119125578 - L1PA16 LINE L1 -1 6165 5178 723 24 0 0 chr5 80504572 80504657 -119125493 + (TTCC)n Simple_repeat Simple_repeat 3 87 0 4859 156 40 44 chr5 80504657 80504697 -119125453 - L1PA16 LINE L1 -988 5178 5139 1832 158 32 0 chr5 80504697 80504976 -119125174 - AluSx SINE Alu -24 288 1 4859 156 40 44 chr5 80504976 80505396 -119124754 - L1PA16 LINE L1 -1027 5139 4719 2064 120 0 7 chr5 80505396 80505687 -119124463 - AluSx SINE Alu -17 295 7 4859 156 40 44 chr5 80505687 80506015 -119124135 - L1PA16 LINE L1 -1447 4719 4391 300 70 0 0 chr5 80506015 80506058 -119124092 + (TG)n Simple_repeat Simple_repeat 2 44 0 4859 156 40 44 chr5 80506058 80506161 -119123989 - L1PA16 LINE L1 -1775 4391 4303 1754 161 34 10 chr5 80506161 80506452 -119123698 - AluSx SINE Alu -14 298 1 4859 156 40 44 chr5 80506452 80506503 -119123647 - L1PA16 LINE L1 -1863 4303 4253 891 166 142 32 chr5 80507453 80507700 -119122450 + L1MB8 LINE L1 5896 6169 -9 1193 84 13 0 chr5 80507819 80507973 -119122177 - AluSc SINE Alu -21 288 133 1902 124 62 0 chr5 80507973 80508246 -119121904 - AluSc SINE Alu -11 298 9 970 169 66 11 chr5 80508346 80508529 -119121621 - AluSx SINE Alu -119 193 1 771 161 161 29 chr5 80509509 80509751 -119120399 + L1MB8 LINE L1 5896 6169 -9 1193 84 13 0 chr5 80509866 80510020 -119120130 - AluSc SINE Alu -21 288 133 1915 122 68 0 chr5 80510020 80510299 -119119851 - AluSc SINE Alu -11 298 1 280 306 25 50 chr5 80511155 80511276 -119118874 + MIR SINE MIR 20 137 -125 * 325 272 34 88 chr5 80511253 80511400 -119118750 + L2 LINE L2 3133 3271 -1 299 258 0 11 chr5 80511394 80511483 -119118667 + MIR SINE MIR 137 224 -38 * 1163 224 115 8 chr5 80511577 80511934 -119118216 - MLT2C1 LTR ERVL -2 395 1 238 271 17 0 chr5 80512054 80512113 -119118037 - L2 LINE L2 0 3313 3254 344 326 126 73 chr5 80512336 80513091 -119117059 - L2 LINE L2 -337 2977 2183 343 246 0 0 chr5 80513518 80513587 -119116563 + MIR3 SINE MIR 97 165 -43 1040 187 33 33 chr5 80514767 80514981 -119115169 + MER8 DNA MER2_type 1 214 -25 316 127 79 0 chr5 80515552 80515615 -119114535 - L1MB8 LINE L1 -1 6177 6110 636 140 0 140 chr5 80515617 80515781 -119114369 + FLAM_C SINE Alu 3 143 0 955 180 0 36 chr5 80515793 80515987 -119114163 + AluJo SINE Alu 120 306 -6 3256 174 63 10 chr5 80516029 80516728 -119113422 - L1MB4 LINE L1 -1 6179 5444 24 0 0 0 chr5 80517322 80517346 -119112804 + AT_rich Low_complexity Low_complexity 1 24 0 1145 70 13 6 chr5 80518112 80518270 -119111880 - L1PA7 LINE L1 -4 6150 5992 22 0 0 0 chr5 80518278 80518300 -119111850 + AT_rich Low_complexity Low_complexity 1 22 0 1846 130 3 3 chr5 80519342 80519627 -119110523 - L1PA16 LINE L1 -9 6157 5873 1099 175 42 23 chr5 80519711 80519928 -119110222 - MLT1A1 LTR MaLR 0 365 145 869 178 0 13 chr5 80520021 80520178 -119109972 - MLT1A1 LTR MaLR -210 155 1 2521 63 0 13 chr5 80525628 80525931 -119104219 + AluY SINE Alu 1 299 -12 395 226 82 19 chr5 80526507 80526666 -119103484 - L1ME4a LINE L1 -1 6120 5952 344 252 129 14 chr5 80526772 80526911 -119103239 - L1ME4a LINE L1 -4 6117 5963 499 294 72 43 chr5 80527505 80527781 -119102369 - L1ME4a LINE L1 -362 5759 5476 242 291 94 17 chr5 80528151 80528268 -119101882 - MIR SINE MIR 0 262 137 418 333 70 9 chr5 80529035 80529263 -119100887 + MIR SINE MIR 6 247 -15 21 36 0 0 chr5 80531946 80531974 -119098176 + AT_rich Low_complexity Low_complexity 1 28 0 1627 146 32 0 chr5 80535279 80535525 -119094625 - AluJo SINE Alu -17 295 42 552 230 230 32 chr5 80535602 80535789 -119094361 + MER58A DNA MER1_type 1 224 0 2269 88 10 0 chr5 80536339 80536633 -119093517 + AluSc SINE Alu 1 297 -12 222 213 385 0 chr5 80537485 80537607 -119092543 + MIR SINE MIR 12 180 -82 25 31 0 0 chr5 80538954 80538986 -119091164 + AT_rich Low_complexity Low_complexity 1 32 0 242 269 15 0 chr5 80539246 80539313 -119090837 + MER116 DNA Mariner 12 79 -1 446 256 0 29 chr5 80539316 80539453 -119090697 + L2 LINE L2 3171 3303 -10 1001 264 134 14 chr5 80542656 80543073 -119087077 + L2 LINE L2 2054 2520 -794 898 251 44 88 chr5 80543063 80543470 -119086680 + L2 LINE L2 2925 3313 0 * 834 232 98 0 chr5 80545177 80545401 -119084749 - MIR SINE MIR -15 247 2 225 281 104 52 chr5 80546863 80546959 -119083191 - L2 LINE L2 -12 3260 3160 652 192 131 0 chr5 80547444 80547574 -119082576 - FAM SINE Alu -26 159 13 2315 93 3 3 chr5 80549284 80549584 -119080566 + AluSq SINE Alu 1 300 -13 25 0 0 0 chr5 80549687 80549712 -119080438 + AT_rich Low_complexity Low_complexity 1 25 0 551 270 35 11 chr5 80551645 80551819 -119078331 - MIR SINE MIR -4 258 81 2096 142 3 0 chr5 80552916 80553226 -119076924 + AluSx SINE Alu 1 311 -1 342 67 0 0 chr5 80553799 80553844 -119076306 + (CA)n Simple_repeat Simple_repeat 2 46 0 290 339 48 24 chr5 80554010 80554178 -119075972 - MIR3 SINE MIR -3 205 34 24 53 0 0 chr5 80555925 80555963 -119074187 + GC_rich Low_complexity Low_complexity 1 38 0 312 247 206 12 chr5 80557795 80557965 -119072185 + MIR SINE MIR 49 251 -11 1930 118 47 10 chr5 80558624 80558921 -119071229 - AluSx SINE Alu -4 308 1 2287 128 34 22 chr5 80559419 80559777 -119070373 + THE1B LTR MaLR 1 362 -2 904 254 94 70 chr5 80560718 80561302 -119068848 - L1MC4 LINE L1 -17 8025 7324 300 180 113 87 chr5 80561481 80561631 -119068519 + MER5A DNA MER1_type 4 157 -32 621 171 207 88 chr5 80562229 80562422 -119067728 + MER20 DNA MER1_type 4 219 0 2879 77 6 0 chr5 80563309 80563671 -119066479 - THE1B LTR MaLR 0 364 1 535 122 0 0 chr5 80564156 80564230 -119065920 + AluS SINE Alu 2 75 -238 539 274 113 0 chr5 80565400 80565604 -119064546 + MIR SINE MIR 32 258 -4 354 225 12 0 chr5 80565835 80565934 -119064216 + MIR SINE MIR 64 147 -61 214 290 32 48 chr5 80566125 80566311 -119063839 + MIR3 SINE MIR 2 184 -24 25 0 0 0 chr5 80567389 80567414 -119062736 + AT_rich Low_complexity Low_complexity 1 25 0 1893 124 31 10 chr5 80568030 80568321 -119061829 + AluSx SINE Alu 1 297 -15 305 82 20 0 chr5 80568957 80569006 -119061144 + (TG)n Simple_repeat Simple_repeat 2 51 0 2094 135 0 3 chr5 80570328 80570632 -119059518 + AluSx SINE Alu 1 303 -9 927 229 32 0 chr5 80570850 80571038 -119059112 - MER20 DNA MER1_type 0 219 26 526 262 78 26 chr5 80571090 80571281 -119058869 + MIR SINE MIR 54 254 -8 207 0 0 0 chr5 80573233 80573256 -119056894 + (T)n Simple_repeat Simple_repeat 1 23 0 2292 130 21 0 chr5 80574103 80574433 -119055717 + MER1B DNA MER1_type 1 337 0 219 115 328 0 chr5 80574586 80574647 -119055503 - MIR SINE MIR -66 196 116 1738 165 10 30 chr5 80574869 80575172 -119054978 + AluJo SINE Alu 3 299 -13 925 10 0 0 chr5 80575429 80575529 -119054621 + AluYb8 SINE Alu 206 305 -13 41 0 0 0 chr5 80576036 80576077 -119054073 + AT_rich Low_complexity Low_complexity 1 41 0 310 183 33 0 chr5 80576811 80576871 -119053279 + MLT1L LTR MaLR 3 64 -551 495 202 56 56 chr5 80576874 80577357 -119052793 - MER96B DNA MER1_type? -3 414 237 730 178 31 31 chr5 80576907 80577003 -119053147 + MER96B DNA MER1_type? 43 137 -280 2349 82 3 13 chr5 80577003 80577309 -119052841 + AluSp SINE Alu 1 303 -10 730 178 31 31 chr5 80577309 80577504 -119052646 + MER96B DNA MER1_type? 137 417 0 438 289 129 57 chr5 80577545 80577639 -119052511 + MLT1J LTR MaLR 100 186 -325 1820 156 3 17 chr5 80577639 80577797 -119052353 - AluJb SINE Alu -21 291 137 2379 101 3 0 chr5 80577797 80578093 -119052057 - AluSx SINE Alu -15 297 1 1820 156 3 17 chr5 80578093 80578229 -119051921 - AluJb SINE Alu -175 137 1 438 289 129 57 chr5 80578229 80578483 -119051667 + MLT1J LTR MaLR 186 473 -38 459 245 0 0 chr5 80582847 80582953 -119047197 + MER5A DNA MER1_type 4 109 -80 433 273 83 0 chr5 80583819 80583940 -119046210 - MER117 DNA MER1_type 0 197 67 246 236 0 0 chr5 80583985 80584040 -119046110 + MER5A DNA MER1_type 129 183 -6 540 272 19 48 chr5 80584201 80584407 -119045743 + Charlie8 DNA MER1_type 64 263 -2154 1404 179 36 54 chr5 80584876 80585241 -119044909 + MLT1A1 LTR MaLR 1 425 -3 200 261 131 31 chr5 80585275 80585405 -119044745 + MIR SINE MIR 117 259 -3 1664 204 182 36 chr5 80588747 80589281 -119040869 + LTR9 LTR ERV1 1 612 0 194 279 108 63 chr5 80590090 80590201 -119039949 + L2 LINE L2 3151 3266 -6 243 88 0 0 chr5 80590622 80590656 -119039494 + (CA)n Simple_repeat Simple_repeat 2 35 0 341 237 232 10 chr5 80592250 80592448 -119037702 + MIR SINE MIR 20 261 -1 890 269 89 49 chr5 80594836 80595322 -119034828 - MLT1H LTR MaLR 0 549 1 311 262 39 29 chr5 80595407 80595510 -119034640 - MER103 DNA DNA -25 141 38 2035 134 0 0 chr5 80596424 80596740 -119033410 - AluSx SINE Alu 0 316 1 3635 112 84 26 chr5 80597442 80598004 -119032146 + MER39B LTR ERV1 1 604 -49 2576 60 0 0 chr5 80598004 80598302 -119031848 - AluY SINE Alu -13 298 1 3635 112 84 26 chr5 80598302 80598356 -119031794 + MER39B LTR ERV1 604 653 0 201 323 97 12 chr5 80598996 80599244 -119030906 + L2 LINE L2 2823 3091 -181 858 258 131 11 chr5 80600180 80600455 -119029695 + LTR16C LTR ERVL 182 489 -2 301 305 123 42 chr5 80602424 80602660 -119027490 + L1ME4a LINE L1 5672 5926 -195 576 66 0 0 chr5 80602832 80602908 -119027242 - L1PA5 LINE L1 -4 6150 6075 24 53 0 0 chr5 80604033 80604071 -119026079 + AT_rich Low_complexity Low_complexity 1 38 0 802 145 24 0 chr5 80604384 80604508 -119025642 - FLAM_A SINE Alu -6 127 1 245 180 16 66 chr5 80605144 80605205 -119024945 - L2 LINE L2 0 3272 3215 274 300 111 11 chr5 80605210 80605300 -119024850 - L2 LINE L2 -35 3237 3139 1418 188 71 8 chr5 80606762 80607130 -119023020 - MER3 DNA MER1_type 0 2624 2234 508 180 23 78 chr5 80607132 80607260 -119022890 - MER3 DNA MER1_type -47 162 42 226 243 10 68 chr5 80607638 80607741 -119022409 - MIR SINE MIR -127 135 39 1512 136 0 0 chr5 80608316 80608529 -119021621 + AluSg/x SINE Alu 92 304 -6 29 47 0 0 chr5 80609192 80609235 -119020915 + AT_rich Low_complexity Low_complexity 1 43 0 2241 115 0 16 chr5 80609284 80609588 -119020562 + AluSx SINE Alu 1 299 -13 2306 87 21 0 chr5 80612340 80612627 -119017523 - AluSx SINE Alu -18 294 2 435 271 58 7 chr5 80613465 80613620 -119016530 - MIR SINE MIR -50 212 50 230 305 40 30 chr5 80613623 80613773 -119016377 - MIR SINE MIR -58 204 53 301 288 41 75 chr5 80614416 80614562 -119015588 + L3 LINE CR1 1285 1425 -152 240 237 137 50 chr5 80614792 80614931 -119015219 - MIR SINE MIR -110 152 2 253 403 8 0 chr5 80615962 80616081 -119014069 + L2 LINE L2 3152 3271 -1 356 102 0 17 chr5 80616481 80616540 -119013610 + (TA)n Simple_repeat Simple_repeat 2 59 0 239 214 128 68 chr5 80617510 80617627 -119012523 + L2 LINE L2 2976 3099 -214 358 255 14 50 chr5 80617734 80617875 -119012275 + L2 LINE L2 3174 3309 -4 303 287 21 11 chr5 80618282 80618376 -119011774 + L1MC4 LINE L1 6609 6703 -1339 237 178 0 0 chr5 80618376 80618421 -119011729 + (TA)n Simple_repeat Simple_repeat 1 45 0 1912 134 28 7 chr5 80618639 80618923 -119011227 - MER1B DNA MER1_type 0 339 50 278 211 211 35 chr5 80620804 80620946 -119009204 - MIR3 SINE MIR -19 189 23 2422 80 0 7 chr5 80621137 80621439 -119008711 + AluSc SINE Alu 1 300 -9 350 158 19 0 chr5 80621772 80621840 -119008310 - Alu SINE Alu -10 292 240 2575 50 0 0 chr5 80621884 80622185 -119007965 + AluY SINE Alu 1 301 -10 387 127 0 0 chr5 80622632 80622695 -119007455 - L1PA15 LINE L1 0 6165 6103 214 176 39 20 chr5 80623220 80623271 -119006879 - L3b LINE CR1 -115 1468 1417 324 0 0 0 chr5 80624456 80624492 -119005658 + (CA)n Simple_repeat Simple_repeat 1 36 0 207 167 0 0 chr5 80625103 80625145 -119005005 + GA-rich Low_complexity Low_complexity 1 42 0 42497 35 33 5 chr5 80625212 80630866 -118999284 - L1PA3 LINE L1 0 6155 318 2868 13 0 3 chr5 80630866 80631177 -118998973 - AluYa5 SINE Alu -1 310 1 42497 35 33 5 chr5 80631177 80631505 -118998645 - L1PA3 LINE L1 -5837 318 1 195 42 0 0 chr5 80631560 80631584 -118998566 + (CAT)n Simple_repeat Simple_repeat 3 26 0 508 271 79 17 chr5 80631587 80631711 -118998439 - MIR SINE MIR -13 249 109 201 39 0 0 chr5 80631711 80631737 -118998413 + (TTGGGG)n Simple_repeat Simple_repeat 2 27 0 508 271 79 17 chr5 80631737 80631789 -118998361 - MIR SINE MIR -153 109 62 303 245 47 19 chr5 80632056 80632162 -118997988 + MIR SINE MIR 89 197 -65 872 177 0 24 chr5 80634042 80634206 -118995944 - FRAM SINE Alu -17 159 1 229 230 60 70 chr5 80634289 80634389 -118995761 + MIR SINE MIR 37 135 -73 510 221 38 15 chr5 80634567 80634698 -118995452 + MIR SINE MIR 97 230 -32 283 189 315 21 chr5 80634843 80634986 -118995164 - MIR SINE MIR -57 205 21 2225 98 7 7 chr5 80635059 80635354 -118994796 + AluSc SINE Alu 1 295 -14 289 307 51 29 chr5 80635587 80635724 -118994426 + L2 LINE L2 3133 3272 0 234 0 0 0 chr5 80636072 80636098 -118994052 + (CAA)n Simple_repeat Simple_repeat 2 27 0 243 0 0 0 chr5 80638541 80638568 -118991582 + (CA)n Simple_repeat Simple_repeat 2 28 0 243 0 0 0 chr5 80638598 80638625 -118991525 + (CA)n Simple_repeat Simple_repeat 2 28 0 884 133 96 0 chr5 80638733 80638899 -118991251 + L1MB3 LINE L1 6000 6181 -2 366 218 142 7 chr5 80639889 80640028 -118990122 - MIR SINE MIR -68 194 31 181 188 0 0 chr5 80640203 80640235 -118989915 + MIR SINE MIR 77 108 -154 1688 184 3 13 chr5 80641379 80641678 -118988472 - AluJo SINE Alu -8 304 9 224 324 9 19 chr5 80642919 80643027 -118987123 - MER5B DNA MER1_type -3 175 69 * 315 291 52 64 chr5 80643025 80643197 -118986953 + MIR3 SINE MIR 16 185 -23 230 173 2 53 chr5 80643713 80643778 -118986372 - MER5B DNA MER1_type -14 175 102 1791 243 81 40 chr5 80643963 80644519 -118985631 + MER119 DNA MER1_type 5 583 0 2124 87 14 38 chr5 80645189 80645477 -118984673 - AluSq SINE Alu -32 281 1 22 0 0 0 chr5 80646224 80646246 -118983904 + AT_rich Low_complexity Low_complexity 1 22 0 2293 104 3 0 chr5 80646317 80646615 -118983535 + AluSp SINE Alu 1 299 -14 350 204 52 81 chr5 80648653 80648746 -118981404 - MIR SINE MIR -12 250 162 2218 92 0 11 chr5 80648746 80649062 -118981088 - AluSc SINE Alu 0 313 1 350 204 52 81 chr5 80649062 80649139 -118981011 - MIR SINE MIR -100 162 84 750 153 16 8 chr5 80649469 80649593 -118980557 + FLAM_C SINE Alu 2 126 -17 21 0 0 0 chr5 80649602 80649623 -118980527 + AT_rich Low_complexity Low_complexity 1 21 0 337 271 54 16 chr5 80649624 80649753 -118980397 + L1ME LINE L1 5689 5822 -299 721 193 0 0 chr5 80649765 80649879 -118980271 + AluJo/FLAM SINE Alu 2 115 -197 275 111 0 0 chr5 80649879 80649915 -118980235 + FLAM SINE Alu 88 123 -10 2340 78 3 26 chr5 80650066 80650375 -118979775 + AluSx SINE Alu 1 302 -10 2116 102 14 7 chr5 80652551 80652835 -118977315 - AluSx SINE Alu -14 298 13 2329 93 0 7 chr5 80652982 80653283 -118976867 - AluSq SINE Alu -14 299 1 2421 81 0 0 chr5 80654521 80654818 -118975332 + AluY SINE Alu 1 297 -14 496 214 116 66 chr5 80654865 80655052 -118975098 + L1ME4a LINE L1 5539 5752 -390 2125 112 44 0 chr5 80655052 80655347 -118974803 + AluSx SINE Alu 1 308 -4 496 214 116 66 chr5 80655347 80655447 -118974703 + L1ME4a LINE L1 5752 5846 -296 231 254 0 0 chr5 80656611 80656666 -118973484 + C-rich Low_complexity Low_complexity 5 59 0 343 257 128 0 chr5 80659338 80659447 -118970703 + MIR SINE MIR 96 218 -44 290 290 65 36 chr5 80659602 80659757 -118970393 + MIR SINE MIR 8 169 -39 699 212 62 6 chr5 80660678 80660857 -118969293 - MIR SINE MIR -67 195 7 2278 80 3 3 chr5 80662007 80662293 -118967857 - AluY SINE Alu -21 290 5 2409 97 0 3 chr5 80662890 80663200 -118966950 - AluSq SINE Alu -4 309 1 25 0 0 0 chr5 80663670 80663695 -118966455 + AT_rich Low_complexity Low_complexity 1 25 0 2226 107 10 3 chr5 80663791 80664089 -118966061 + AluSx SINE Alu 1 300 -12 1328 212 89 42 chr5 80664200 80664605 -118965545 - MLT1H1 LTR MaLR -65 490 67 1781 168 3 7 chr5 80664900 80665197 -118964953 - AluJb SINE Alu -16 296 1 23 0 0 0 chr5 80665348 80665371 -118964779 + AT_rich Low_complexity Low_complexity 1 23 0 7762 20 0 5 chr5 80665371 80666262 -118963888 - L1PA3 LINE L1 0 6155 5269 653 229 8 96 chr5 80666402 80666642 -118963508 + MER20 DNA MER1_type 1 219 0 714 84 0 0 chr5 80666840 80666935 -118963215 - AluSg/x SINE Alu -14 295 201 579 295 69 9 chr5 80668218 80668435 -118961715 - MIR SINE MIR -19 243 14 1748 77 14 0 chr5 80670664 80670885 -118959265 - AluSq SINE Alu -1 312 89 234 0 0 0 chr5 80671077 80671103 -118959047 + (CA)n Simple_repeat Simple_repeat 2 27 0 265 269 76 50 chr5 80671582 80671701 -118958449 - L2 LINE L2 -2 3270 3149 244 264 14 0 chr5 80671704 80671776 -118958374 + MIR3 SINE MIR 121 193 -15 2320 103 0 0 chr5 80672669 80672979 -118957171 + AluSq SINE Alu 1 310 -3 243 255 75 9 chr5 80673444 80673550 -118956600 + MIR SINE MIR 52 164 -98 182 306 41 0 chr5 80677288 80677337 -118952813 - L2 LINE L2 -18 3254 3204 2299 125 0 0 chr5 80677524 80677836 -118952314 + AluSx SINE Alu 1 312 0 201 330 29 10 chr5 80678381 80678484 -118951666 + MIR SINE MIR 33 137 -125 217 315 88 92 chr5 80678506 80678811 -118951339 - L2 LINE L2 -26 3246 2943 580 199 37 0 chr5 80679282 80679418 -118950732 + MER5A DNA MER1_type 35 175 -14 195 139 0 28 chr5 80680446 80680482 -118949668 + L2 LINE L2 3138 3172 -100 214 269 0 0 chr5 80680585 80680637 -118949513 - MIR SINE MIR -91 117 66 2502 48 0 10 chr5 80681391 80681707 -118948443 + AluY SINE Alu 1 311 0 297 89 0 0 chr5 80681859 80681904 -118948246 + (CA)n Simple_repeat Simple_repeat 1 45 0 286 282 29 29 chr5 80682940 80683043 -118947107 + MER5A DNA MER1_type 36 138 -51 373 252 166 13 chr5 80683578 80683729 -118946421 + MER5A DNA MER1_type 10 183 -6 2268 81 3 3 chr5 80683943 80684227 -118945923 + AluY SINE Alu 1 284 -27 29 47 0 0 chr5 80684227 80684270 -118945880 + AT_rich Low_complexity Low_complexity 1 43 0 411 328 114 23 chr5 80684621 80684972 -118945178 + L3 LINE CR1 679 1061 -516 243 0 0 0 chr5 80685203 80685230 -118944920 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 364 197 139 0 chr5 80686485 80686607 -118943543 - L1ME4a LINE L1 -16 6105 5967 297 0 0 0 chr5 80687777 80687810 -118942340 + (CA)n Simple_repeat Simple_repeat 2 34 0 1938 170 32 49 chr5 80687814 80688184 -118941966 - MLT1A2 LTR MaLR -10 364 1 199 270 109 35 chr5 80688522 80688696 -118941454 + L2 LINE L2 2230 2416 -898 2253 119 0 3 chr5 80689649 80689952 -118940198 + AluSx SINE Alu 1 302 -10 204 170 0 38 chr5 80690136 80690189 -118939961 + CT-rich Low_complexity Low_complexity 2 52 0 300 308 83 0 chr5 80691119 80691252 -118938898 + L2 LINE L2 3170 3313 0 447 19 0 0 chr5 80691411 80691463 -118938687 + (CA)n Simple_repeat Simple_repeat 1 52 0 2067 128 0 7 chr5 80691463 80691753 -118938397 - AluSg SINE Alu -22 288 1 332 302 101 0 chr5 80692253 80692412 -118937738 - MIR SINE MIR 0 262 88 251 328 6 6 chr5 80694479 80694582 -118935568 + G-rich Low_complexity Low_complexity 3 180 0 41 72 0 0 chr5 80694749 80694832 -118935318 + GC_rich Low_complexity Low_complexity 1 83 0 2296 104 7 13 chr5 80696867 80697003 -118933147 + AluSx SINE Alu 1 136 -176 2336 99 3 0 chr5 80697003 80697307 -118932843 + AluSc SINE Alu 1 305 -4 2296 104 7 13 chr5 80697307 80697478 -118932672 + AluSx SINE Alu 136 306 -6 461 136 27 82 chr5 80697489 80697599 -118932551 - L2 LINE L2 -5 3308 3205 2053 94 91 0 chr5 80698635 80698921 -118931229 - AluSx SINE Alu 0 312 1 2103 130 0 0 chr5 80701294 80701621 -118928529 + AluSx SINE Alu 1 327 0 524 297 90 22 chr5 80702154 80702310 -118927840 + MIR SINE MIR 20 197 -65 180 0 0 0 chr5 80702310 80702330 -118927820 + (TTA)n Simple_repeat Simple_repeat 1 20 0 524 297 90 22 chr5 80702330 80702395 -118927755 + MIR SINE MIR 197 256 -6 4986 165 22 21 chr5 80702492 80703924 -118926226 + L1MB7 LINE L1 4739 6165 -19 244 292 208 0 chr5 80703988 80704084 -118926066 - L2 LINE L2 -9 3263 3148 334 283 158 49 chr5 80704461 80704726 -118925424 - L2 LINE L2 -454 2860 2567 4002 174 64 59 chr5 80706607 80706842 -118923308 + L1MB7 LINE L1 4951 5183 -1001 1137 104 25 0 chr5 80706842 80707005 -118923145 + L1PA10 LINE L1 5998 6164 -4 4002 174 64 59 chr5 80707005 80707037 -118923113 + L1MB7 LINE L1 5183 5213 -971 1556 171 36 40 chr5 80707037 80707341 -118922809 + AluJo SINE Alu 4 306 -6 4002 174 64 59 chr5 80707341 80707935 -118922215 + L1MB7 LINE L1 5213 5808 -376 1999 108 0 52 chr5 80707935 80708240 -118921910 + AluSx SINE Alu 4 292 -20 4002 174 64 59 chr5 80708240 80708558 -118921592 + L1MB7 LINE L1 5808 6123 -61 1966 169 27 27 chr5 80708558 80708573 -118921577 - Charlie1 DNA MER1_type -133 2628 2614 1430 157 16 0 chr5 80708573 80708815 -118921335 + L1PA16 LINE L1 5913 6158 -8 1966 169 27 27 chr5 80708815 80709250 -118920900 - Charlie1 DNA MER1_type -146 2615 2178 1493 139 40 137 chr5 80709435 80709660 -118920490 - MER2 DNA MER2_type 0 344 169 1728 179 0 4 chr5 80709660 80709933 -118920217 + AluJb SINE Alu 2 273 -39 1493 139 40 137 chr5 80709933 80710087 -118920063 - MER2 DNA MER2_type -175 169 2 2286 114 0 0 chr5 80710747 80711044 -118919106 + AluSx SINE Alu 1 297 -15 509 242 91 78 chr5 80711140 80711371 -118918779 + MIR SINE MIR 8 241 -21 274 299 62 21 chr5 80711389 80711533 -118918617 + MIR SINE MIR 36 185 -77 1840 197 0 0 chr5 80712790 80713100 -118917050 - AluJo SINE Alu -2 310 1 2158 122 0 0 chr5 80713175 80713470 -118916680 + AluSx SINE Alu 1 295 -17 189 74 0 0 chr5 80713653 80713680 -118916470 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 298 230 9 9 chr5 80713748 80713861 -118916289 + CT-rich Low_complexity Low_complexity 3 115 0 207 0 0 0 chr5 80714120 80714143 -118916007 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1818 155 3 14 chr5 80714145 80714435 -118915715 - AluJb SINE Alu -25 287 1 234 237 17 0 chr5 80714937 80714996 -118915154 + L3 LINE CR1 1244 1303 -274 1710 170 0 7 chr5 80715022 80715293 -118914857 + AluJb SINE Alu 6 274 -38 881 141 6 17 chr5 80715297 80715474 -118914676 + GA-rich Low_complexity Low_complexity 4 178 0 242 54 0 27 chr5 80715480 80715517 -118914633 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 283 143 0 0 chr5 80715517 80715559 -118914591 + (GGAAA)n Simple_repeat Simple_repeat 3 44 0 1461 177 13 46 chr5 80715777 80715903 -118914247 + AluJo SINE Alu 1 130 -182 2423 51 10 3 chr5 80715903 80716199 -118913951 - AluY SINE Alu -13 298 1 1461 177 13 46 chr5 80716199 80716377 -118913773 + AluJo SINE Alu 130 295 -17 234 331 60 23 chr5 80716676 80716809 -118913341 + L3b LINE CR1 1216 1353 -230 353 269 8 50 chr5 80716946 80717065 -118913085 + L2 LINE L2 3145 3258 -14 2202 106 3 3 chr5 80717120 80717421 -118912729 - AluSx SINE Alu 0 312 12 2237 147 0 6 chr5 80718685 80719045 -118911105 - L1PB1 LINE L1 -1 6150 5793 402 21 0 0 chr5 80719045 80719092 -118911058 + (TG)n Simple_repeat Simple_repeat 1 47 0 196 146 37 24 chr5 80719357 80719439 -118910711 + (TA)n Simple_repeat Simple_repeat 2 84 0 5448 170 30 9 chr5 80719443 80720989 -118909161 - L1PB1 LINE L1 -413 5738 4161 2125 108 0 3 chr5 80721059 80721345 -118908805 - AluSx SINE Alu -6 306 22 239 273 26 0 chr5 80722176 80722253 -118907897 - MIR SINE MIR -55 207 129 250 247 140 11 chr5 80722288 80722381 -118907769 - L2 LINE L2 -6 3307 3203 1647 158 106 12 chr5 80722961 80723290 -118906860 + MER46B DNA MER2_type 1 235 -1 222 254 224 67 chr5 80724358 80724492 -118905658 + MER5A DNA MER1_type 16 170 -19 2128 98 0 18 chr5 80724675 80724987 -118905163 + AluSx SINE Alu 1 307 0 439 278 0 0 chr5 80725677 80725774 -118904376 + MIR SINE MIR 46 142 -66 309 175 53 18 chr5 80725774 80725888 -118904262 + (TA)n Simple_repeat Simple_repeat 1 118 0 189 145 12 48 chr5 80725928 80726011 -118904139 + (TTTA)n Simple_repeat Simple_repeat 4 83 0 306 207 33 33 chr5 80726013 80726034 -118904116 + (TA)n Simple_repeat Simple_repeat 1 21 -129 1883 139 7 4 chr5 80726034 80726315 -118903835 + AluSx SINE Alu 1 282 -30 306 207 33 33 chr5 80726315 80726443 -118903707 + (TA)n Simple_repeat Simple_repeat 20 150 0 25 65 0 0 chr5 80726633 80726679 -118903471 + AT_rich Low_complexity Low_complexity 1 46 0 43392 56 5 0 chr5 80727832 80733947 -118896203 + L1PA5 LINE L1 11 6154 0 2190 123 0 0 chr5 80734026 80734327 -118895823 + AluSg SINE Alu 1 301 -9 231 143 0 175 chr5 80734463 80734526 -118895624 - MIR SINE MIR -61 147 96 499 292 49 41 chr5 80734715 80734958 -118895192 - MIR SINE MIR 0 262 18 2435 91 3 0 chr5 80734970 80735277 -118894873 + AluSp SINE Alu 1 308 -5 1086 186 4 106 chr5 80735379 80735643 -118894507 + L1ME LINE L1 5528 5764 -402 1257 119 23 0 chr5 80735643 80735819 -118894331 + AluSg/x SINE Alu 120 299 -13 2189 139 46 22 chr5 80735878 80736244 -118893906 + THE1C LTR MaLR 1 375 0 216 307 61 79 chr5 80736254 80736368 -118893782 - MER5A DNA MER1_type -25 164 53 285 249 54 113 chr5 80736884 80737069 -118893081 + L3 LINE CR1 1206 1379 -198 687 241 90 19 chr5 80737076 80737288 -118892862 + MIR SINE MIR 20 246 -16 2085 125 14 14 chr5 80737985 80738280 -118891870 + AluSx SINE Alu 1 295 -17 808 174 0 23 chr5 80738415 80738547 -118891603 + AluJo SINE Alu 6 134 -178 3179 246 102 56 chr5 80738560 80740099 -118890051 + HAL1 LINE L1 163 1772 -735 2042 140 0 0 chr5 80740127 80740406 -118889744 + AluSp SINE Alu 1 279 -34 207 0 0 0 chr5 80740409 80740432 -118889718 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 331 316 99 47 chr5 80740433 80740604 -118889546 + LTR16A LTR ERVL 19 198 -252 437 244 187 60 chr5 80740857 80741074 -118889076 + HAL1 LINE L1 1920 2108 -399 1897 141 37 13 chr5 80741074 80741373 -118888777 - AluSx SINE Alu -6 306 1 437 244 187 60 chr5 80741373 80741642 -118888508 + HAL1 LINE L1 2108 2468 -39 24 0 0 0 chr5 80741654 80741678 -118888472 + AT_rich Low_complexity Low_complexity 1 24 0 2620 101 19 25 chr5 80741892 80742258 -118887892 + THE1B LTR MaLR 1 364 0 1877 195 105 27 chr5 80742682 80743013 -118887137 - L1MD2 LINE L1 -408 5951 5575 2044 142 3 0 chr5 80743013 80743324 -118886826 + AluSx SINE Alu 1 312 0 1877 195 105 27 chr5 80743324 80743438 -118886712 - L1MD2 LINE L1 -784 5575 5471 2121 114 10 13 chr5 80743521 80743827 -118886323 + AluSx SINE Alu 1 305 -7 733 249 64 0 chr5 80743965 80744138 -118886012 + MER63A DNA MER1_type 27 210 0 414 0 0 0 chr5 80744182 80744228 -118885922 + (CA)n Simple_repeat Simple_repeat 1 46 0 2063 171 104 36 chr5 80744228 80744697 -118885453 + MLT1D LTR MaLR 2 502 -3 243 0 0 0 chr5 80744697 80744724 -118885426 + (CA)n Simple_repeat Simple_repeat 2 28 0 349 274 75 14 chr5 80744825 80744921 -118885229 - L1ME3A LINE L1 -284 5886 5797 2266 110 0 0 chr5 80744921 80745220 -118884930 + AluY SINE Alu 1 299 -12 468 0 0 0 chr5 80745221 80745273 -118884877 + (TA)n Simple_repeat Simple_repeat 1 52 0 349 274 75 14 chr5 80745273 80745320 -118884830 - L1ME3A LINE L1 -372 5798 5732 226 256 0 0 chr5 80746223 80746266 -118883884 - L1ME3A LINE L1 -2178 5630 5588 2320 106 0 0 chr5 80746777 80747070 -118883080 - AluSx SINE Alu -19 293 1 2213 119 0 22 chr5 80747201 80747520 -118882630 - AluSx SINE Alu 0 312 1 2088 147 0 3 chr5 80748390 80748703 -118881447 - AluJo SINE Alu 0 312 1 551 271 70 56 chr5 80749445 80749875 -118880275 + L1MC/D LINE L1 5265 5313 -867 471 136 159 0 chr5 80749881 80749969 -118880181 + FLAM_C SINE Alu 4 105 -38 738 223 18 0 chr5 80749988 80750154 -118879996 + MIR SINE MIR 46 214 -48 32 26 0 0 chr5 80750232 80750271 -118879879 + AT_rich Low_complexity Low_complexity 1 39 0 1993 129 13 10 chr5 80750286 80750589 -118879561 + AluSx SINE Alu 1 304 -8 378 106 69 28 chr5 80750589 80750911 -118879239 + (TA)n Simple_repeat Simple_repeat 1 335 0 514 221 59 107 chr5 80751165 80751338 -118878812 - L1MD2 LINE L1 -4 6355 6196 2316 106 3 0 chr5 80751338 80751640 -118878510 + AluSx SINE Alu 1 303 -9 514 221 59 107 chr5 80751640 80751719 -118878431 - L1MD2 LINE L1 -163 6196 6115 3601 140 100 19 chr5 80751758 80752378 -118877772 - L1MC1 LINE L1 -2 6331 5662 2677 221 21 54 chr5 80752374 80753083 -118877067 - L1MD2 LINE L1 -224 6135 5450 * 1851 169 3 3 chr5 80753502 80753803 -118876347 - AluJb SINE Alu -6 306 6 291 256 48 24 chr5 80754045 80754170 -118875980 + LTR16C LTR ERVL 352 479 -12 2168 119 0 0 chr5 80755058 80755343 -118874807 - AluSx SINE Alu -21 291 7 45045 38 3 0 chr5 80755670 80761805 -118868345 + L1PA4 LINE L1 2 6152 -3 22 0 0 0 chr5 80761805 80761827 -118868323 + AT_rich Low_complexity Low_complexity 1 22 0 803 360 19 16 chr5 80762462 80762887 -118867263 + HERV16 LTR ERVL 947 1372 -3624 475 221 10 10 chr5 80762899 80763003 -118867147 - LTR40a LTR ERVL -415 104 1 2308 95 0 0 chr5 80763174 80763470 -118866680 - AluSc SINE Alu -13 296 1 311 277 211 29 chr5 80763541 80763783 -118866367 + MLT1H LTR MaLR 43 328 -221 199 282 65 48 chr5 80764265 80764389 -118865761 - L2 LINE L2 -8 3264 3139 325 345 35 7 chr5 80764397 80764539 -118865611 + MIR SINE MIR 8 153 -109 1464 179 131 0 chr5 80765145 80765488 -118864662 + AluSx SINE Alu 1 379 0 208 275 8 42 chr5 80766892 80767012 -118863138 + GA-rich Low_complexity Low_complexity 3 118 0 896 279 5 5 chr5 80767647 80767866 -118862284 - MIR SINE MIR -42 220 2 1668 172 10 13 chr5 80768155 80768457 -118861693 - AluJo SINE Alu -9 303 3 2282 105 3 0 chr5 80768526 80768831 -118861319 + AluSc SINE Alu 1 306 -3 2320 102 3 0 chr5 80768842 80769146 -118861004 + AluSp SINE Alu 1 305 -8 2260 114 0 0 chr5 80769629 80769928 -118860222 + AluSx SINE Alu 1 299 -13 194 0 0 37 chr5 80770348 80770375 -118859775 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2048 129 3 13 chr5 80770599 80770910 -118859240 + AluSq SINE Alu 1 308 -5 836 200 0 55 chr5 80770919 80771084 -118859066 + FRAM SINE Alu 1 156 -20 1949 118 0 21 chr5 80771428 80771759 -118858391 - AluSx SINE Alu 0 325 1 263 317 58 0 chr5 80771823 80771943 -118858207 + L3 LINE CR1 1217 1343 -234 2237 127 0 0 chr5 80772132 80772432 -118857718 - AluSx SINE Alu -12 300 1 453 163 0 12 chr5 80772468 80772554 -118857596 + L2 LINE L2 3188 3272 0 2303 144 14 49 chr5 80773546 80773991 -118856159 + L1 LINE L1 4593 5021 -1125 268 122 0 0 chr5 80775268 80775309 -118854841 - MER21A LTR ERV1 -353 578 538 1269 149 48 12 chr5 80775473 80775722 -118854428 + L1MA8 LINE L1 6030 6287 -4 27 0 0 0 chr5 80775730 80775757 -118854393 + AT_rich Low_complexity Low_complexity 1 27 0 1508 84 15 5 chr5 80776246 80776448 -118853702 - AluY SINE Alu -8 303 100 351 209 86 48 chr5 80776452 80776557 -118853593 + MIR SINE MIR 80 188 -74 180 0 0 0 chr5 80776590 80776610 -118853540 + (TTA)n Simple_repeat Simple_repeat 1 20 0 6382 153 25 19 chr5 80776894 80777279 -118852871 + L1P3 LINE L1 7 388 -6073 207 0 0 0 chr5 80777279 80777302 -118852848 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6382 153 25 19 chr5 80777302 80777985 -118852165 + L1P3 LINE L1 388 1082 -5379 4713 223 64 72 chr5 80778085 80779339 -118850811 - L1M2a LINE L1 -5923 1245 2 355 260 94 50 chr5 80780129 80780310 -118849840 + L1ME4a LINE L1 5920 6108 -13 588 271 130 64 chr5 80781520 80781929 -118848221 + MLT1H LTR MaLR 113 548 -1 237 294 0 0 chr5 80782217 80782268 -118847882 + (TG)n Simple_repeat Simple_repeat 1 51 0 2203 98 0 46 chr5 80782395 80782720 -118847430 + AluSx SINE Alu 1 310 -2 432 0 0 0 chr5 80782739 80782787 -118847363 + (TG)n Simple_repeat Simple_repeat 1 48 0 286 277 113 19 chr5 80782807 80782966 -118847184 + MER112 DNA MER1_type 86 259 -1 333 242 50 0 chr5 80782978 80783077 -118847073 - L2 LINE L2 -6 3307 3204 1702 127 4 4 chr5 80784990 80785249 -118844901 + AluSx SINE Alu 54 312 0 520 204 27 1 chr5 80785257 80785376 -118844774 - L1MC/D LINE L1 -570 5551 5448 2121 114 10 13 chr5 80785446 80785752 -118844398 + AluSx SINE Alu 1 305 -7 746 243 64 0 chr5 80785891 80786064 -118844086 + MER63A DNA MER1_type 27 210 0 306 0 0 0 chr5 80786108 80786142 -118844008 + (CA)n Simple_repeat Simple_repeat 1 34 0 2063 171 104 36 chr5 80786142 80786611 -118843539 + MLT1D LTR MaLR 2 502 -3 297 0 0 0 chr5 80786611 80786644 -118843506 + (CA)n Simple_repeat Simple_repeat 2 34 0 349 274 75 14 chr5 80786745 80786841 -118843309 - L1ME3A LINE L1 -284 5886 5797 2266 110 0 0 chr5 80786841 80787140 -118843010 + AluY SINE Alu 1 299 -12 180 0 0 0 chr5 80787141 80787161 -118842989 + (TA)n Simple_repeat Simple_repeat 1 20 0 349 274 75 14 chr5 80787161 80787208 -118842942 - L1ME3A LINE L1 -372 5798 5732 226 256 0 0 chr5 80788111 80788154 -118841996 - L1ME3A LINE L1 -2178 5630 5588 2071 92 0 32 chr5 80788664 80788946 -118841204 - AluSx SINE Alu -19 293 21 23 54 0 0 chr5 80789044 80789081 -118841069 + AT_rich Low_complexity Low_complexity 1 37 0 21438 50 0 1 chr5 80789512 80792882 -118837268 + L1PA6 LINE L1 2778 6154 0 2227 104 27 53 chr5 80793294 80793668 -118836482 - THE1B LTR MaLR 0 364 1 12880 86 3 1 chr5 80793668 80795244 -118834906 - THE1B-int LTR MaLR 0 1580 1 2422 107 51 23 chr5 80795244 80795598 -118834552 - THE1B LTR MaLR 0 364 1 43492 35 22 1 chr5 80795934 80801957 -118828193 + L1PA2 LINE L1 2 6155 0 3807 114 8 19 chr5 80802176 80802709 -118827441 - MER1A DNA MER1_type 0 527 1 1726 118 29 18 chr5 80802742 80803021 -118827129 + L1MC1 LINE L1 6052 6333 0 872 257 95 28 chr5 80803032 80803729 -118826421 - L1ME3A LINE L1 -749 5397 4735 218 262 0 0 chr5 80803800 80803842 -118826308 + polypyrimidine Low_complexity Low_complexity 1 42 0 1841 144 6 22 chr5 80803842 80804154 -118825996 - AluJb SINE Alu -5 307 1 255 241 114 25 chr5 80804160 80804318 -118825832 - L1ME3A LINE L1 -1594 4552 4381 1062 270 209 9 chr5 80804524 80805073 -118825077 + L1MC4a LINE L1 5268 5926 -1882 225 209 0 0 chr5 80805073 80805116 -118825034 + (TA)n Simple_repeat Simple_repeat 2 44 0 230 227 41 62 chr5 80805208 80805305 -118824845 + L1MC4a LINE L1 6074 6168 -1640 2449 87 0 3 chr5 80806099 80806409 -118823741 + AluSx SINE Alu 1 309 -3 304 200 40 27 chr5 80806740 80806815 -118823335 - L1ME3A LINE L1 -53 6117 6042 958 109 0 36 chr5 80806954 80807092 -118823058 - FLAM_C SINE Alu 0 133 1 833 194 31 42 chr5 80807275 80807466 -118822684 - MER97c DNA MER1_type? -660 430 242 276 211 58 87 chr5 80807551 80807655 -118822495 + MLT1L LTR MaLR 507 607 -8 418 367 39 4 chr5 80807707 80807936 -118822214 + L2 LINE L2 1795 2031 -1283 377 301 124 0 chr5 80807984 80808097 -118822053 + L2 LINE L2 3146 3272 0 1580 197 103 14 chr5 80808345 80808705 -118821445 + MSTD LTR MaLR 1 392 -4 21 0 0 0 chr5 80808760 80808781 -118821369 + AT_rich Low_complexity Low_complexity 1 21 0 228 297 144 9 chr5 80809995 80810106 -118820044 - MIR3 SINE MIR -52 156 31 2097 118 7 0 chr5 80811927 80812216 -118817934 + AluSx SINE Alu 1 291 -21 2238 99 0 10 chr5 80812679 80812992 -118817158 - AluY SINE Alu -1 310 1 2129 133 0 0 chr5 80814521 80814822 -118815328 - AluSx SINE Alu -11 301 1 224 309 114 29 chr5 80815277 80815452 -118814698 - L3b LINE CR1 -217 1366 1177 814 253 30 34 chr5 80815752 80815985 -118814165 + L2 LINE L2 3057 3288 -25 421 188 99 50 chr5 80816617 80816718 -118813432 - MIR3 SINE MIR -41 167 62 1902 136 11 0 chr5 80817027 80817342 -118812808 + AluSx SINE Alu 1 318 0 530 261 143 32 chr5 80817401 80817639 -118812511 + MIR SINE MIR 5 259 -3 322 239 54 33 chr5 80819275 80819367 -118810783 - L2 LINE L2 0 3272 3179 1309 191 58 4 chr5 80820598 80820823 -118809327 - MER8 DNA MER2_type -1 238 2 246 299 60 0 chr5 80821171 80821238 -118808912 - L2 LINE L2 -2 3270 3200 235 261 113 56 chr5 80821519 80821661 -118808489 - L2 LINE L2 -127 3145 2996 24 0 0 0 chr5 80822153 80822177 -118807973 + AT_rich Low_complexity Low_complexity 1 24 0 376 296 38 0 chr5 80822191 80822323 -118807827 - MIR SINE MIR -13 249 113 2295 109 0 6 chr5 80822712 80823024 -118807126 - AluSx SINE Alu -2 310 1 230 227 41 62 chr5 80823818 80823915 -118806235 - L1MC4a LINE L1 -1640 6168 6074 225 209 0 0 chr5 80824007 80824050 -118806100 + (TA)n Simple_repeat Simple_repeat 2 44 0 788 269 203 11 chr5 80824050 80824604 -118805546 - L1MC4a LINE L1 -340 5781 5262 255 241 114 25 chr5 80824805 80824963 -118805187 + L1MC/D LINE L1 4381 4552 -1594 1994 141 7 10 chr5 80824969 80825273 -118804877 + AluJb SINE Alu 1 303 -9 218 262 0 0 chr5 80825273 80825315 -118804835 + polypurine Low_complexity Low_complexity 1 42 0 920 249 107 34 chr5 80825384 80826091 -118804059 + L1MC/D LINE L1 4735 5492 -791 4563 127 31 31 chr5 80826091 80826400 -118803750 - L1MC1 LINE L1 0 6333 6025 3948 116 4 15 chr5 80826400 80826933 -118803217 + MER1A DNA MER1_type 1 527 0 4563 127 31 31 chr5 80826933 80827386 -118802764 - L1MC1 LINE L1 -307 6026 5571 920 249 107 34 chr5 80827386 80827433 -118802717 + L1MC/D LINE L1 5492 5534 -749 3771 202 74 29 chr5 80827453 80827697 -118802453 + L1MC4 LINE L1 6577 6809 -1233 2128 119 0 0 chr5 80827697 80827991 -118802159 + AluSx SINE Alu 1 294 -18 3771 202 74 29 chr5 80827991 80828683 -118801467 + L1MC4 LINE L1 6809 7555 -487 1389 169 137 38 chr5 80829191 80829557 -118800593 - LTR37A LTR ERV1 0 426 25 23 68 0 0 chr5 80830357 80830401 -118799749 + GC_rich Low_complexity Low_complexity 1 44 0 315 336 112 57 chr5 80830549 80831076 -118799074 + L1M2 LINE L1 672 1227 -5622 237 289 96 10 chr5 80831589 80831693 -118798457 - MIR SINE MIR -95 167 55 2365 89 3 0 chr5 80832431 80832733 -118797417 + AluSx SINE Alu 1 303 -9 830 250 104 0 chr5 80833070 80833282 -118796868 - MIR SINE MIR -27 235 2 2871 10 0 0 chr5 80833561 80833868 -118796282 + AluYb8 SINE Alu 1 307 -11 249 258 72 31 chr5 80834085 80834182 -118795968 + MIR3 SINE MIR 87 187 -21 249 33 0 0 chr5 80834703 80834733 -118795417 + (CA)n Simple_repeat Simple_repeat 2 31 0 1502 233 28 44 chr5 80834782 80835215 -118794935 - L1MC4a LINE L1 -1854 5954 5529 * 5581 193 66 22 chr5 80835213 80835683 -118794467 - L1MB5 LINE L1 -8 6166 5718 1700 147 134 16 chr5 80835683 80835990 -118794160 - MER61A LTR ERV1 0 343 1 5581 193 66 22 chr5 80835990 80837106 -118793044 - L1MB5 LINE L1 -456 5718 4465 2086 122 27 14 chr5 80837106 80837400 -118792750 - AluSq SINE Alu -15 298 1 5581 193 66 22 chr5 80837400 80837859 -118792291 - L1MB5 LINE L1 -1709 4465 4028 229 206 162 15 chr5 80837867 80837935 -118792215 - L2 LINE L2 0 3272 3195 2356 82 0 0 chr5 80838003 80838285 -118791865 + AluSx SINE Alu 1 282 -30 325 298 173 14 chr5 80838394 80838602 -118791548 - L2 LINE L2 -263 3050 2810 1695 133 24 88 chr5 80838849 80839179 -118790971 + AluJb SINE Alu 1 309 -3 24 0 0 0 chr5 80839403 80839427 -118790723 + AT_rich Low_complexity Low_complexity 1 24 0 267 103 0 0 chr5 80842913 80842952 -118787198 + (TG)n Simple_repeat Simple_repeat 1 39 0 1273 252 150 22 chr5 80843006 80843466 -118786684 - LTR33 LTR ERVL -2 519 1 684 213 21 0 chr5 80843544 80843685 -118786465 - L1MA10 LINE L1 -2 6332 6189 224 263 28 0 chr5 80843823 80843889 -118786261 - MIR SINE MIR -100 108 40 613 294 44 40 chr5 80844297 80844467 -118785683 + L2 LINE L2 2877 3050 -263 1763 167 0 38 chr5 80844467 80844784 -118785366 - AluJb SINE Alu -7 305 1 613 294 44 40 chr5 80844784 80844885 -118785265 + L2 LINE L2 3050 3149 -164 2089 174 72 12 chr5 80844893 80845380 -118784770 - Charlie1 DNA MER1_type -3 2758 2243 2386 92 0 7 chr5 80845537 80845843 -118784307 + AluSq SINE Alu 1 304 -9 2237 93 0 7 chr5 80846807 80847149 -118783001 + AluY SINE Alu 1 311 0 234 320 10 0 chr5 80847501 80847598 -118782552 + (TCTA)n Simple_repeat Simple_repeat 1 98 0 2360 96 0 0 chr5 80847761 80848062 -118782088 - AluSg SINE Alu -9 301 1 22 0 0 0 chr5 80848510 80848532 -118781618 + AT_rich Low_complexity Low_complexity 1 22 0 618 178 0 17 chr5 80848924 80849042 -118781108 + L1MB7 LINE L1 6060 6175 -9 21 57 0 0 chr5 80849629 80849664 -118780486 + AT_rich Low_complexity Low_complexity 1 35 0 1591 138 11 33 chr5 80849799 80850074 -118780076 - L1MB8 LINE L1 -1 6177 5909 32 43 0 0 chr5 80850084 80850130 -118780020 + AT_rich Low_complexity Low_complexity 1 46 0 484 308 28 28 chr5 80851157 80851339 -118778811 - MER5A DNA MER1_type -6 183 2 825 222 21 46 chr5 80851489 80851728 -118778422 - L1M4 LINE L1 -1404 4742 4510 2545 127 72 7 chr5 80852065 80852468 -118777682 - MSTB1 LTR MaLR 0 432 4 1655 50 5 10 chr5 80852728 80852929 -118777221 + AluY SINE Alu 102 301 -10 601 244 16 0 chr5 80853258 80853385 -118776765 - MIR SINE MIR -119 143 15 467 208 107 94 chr5 80853450 80853609 -118776541 - MER5B DNA MER1_type -1 177 17 2161 117 3 0 chr5 80854591 80854890 -118775260 + AluSg SINE Alu 1 300 -10 1036 101 7 0 chr5 80855875 80856014 -118774136 - LTR24B LTR ERV1 -7 569 430 2478 122 30 24 chr5 80856021 80856452 -118773698 - THE1C LTR MaLR 0 428 1 * 2881 109 26 5 chr5 80856452 80856870 -118773280 - LTR24B LTR ERV1 -149 427 1 476 282 33 66 chr5 80857244 80857485 -118772665 - MER102b DNA MER1_type -3 338 106 344 282 123 25 chr5 80858652 80858815 -118771335 + MIR SINE MIR 84 262 0 4421 168 63 21 chr5 80858906 80859851 -118770299 - L1MB8 LINE L1 0 6178 5199 2270 100 0 0 chr5 80860648 80860938 -118769212 + AluSx SINE Alu 1 290 -22 913 246 96 109 chr5 80861049 80861819 -118768331 - HAL1 LINE L1 -1006 1501 742 717 260 68 18 chr5 80861940 80862167 -118767983 - MIR SINE MIR -12 250 15 1994 138 0 0 chr5 80862816 80863125 -118767025 + AluJb SINE Alu 1 309 0 509 275 63 19 chr5 80863365 80863634 -118766516 - L1M4 LINE L1 -2289 3857 3577 189 0 0 0 chr5 80864175 80864196 -118765954 + (TATAG)n Simple_repeat Simple_repeat 3 23 0 24 0 0 0 chr5 80864280 80864304 -118765846 + AT_rich Low_complexity Low_complexity 1 24 0 785 159 0 0 chr5 80864304 80864411 -118765739 - FLAM_C SINE Alu -25 118 12 294 276 0 2 chr5 80864413 80864490 -118765660 - MIR SINE MIR -93 115 40 2205 136 0 0 chr5 80865583 80865891 -118764259 - AluSx SINE Alu -4 308 1 491 261 69 69 chr5 80866379 80866448 -118763702 + MER5A DNA MER1_type 2 70 -119 670 135 0 10 chr5 80866448 80866552 -118763598 + L1MB5 LINE L1 6072 6174 0 491 261 69 69 chr5 80866552 80866670 -118763480 + MER5A DNA MER1_type 69 189 0 7543 118 3 21 chr5 80867066 80869286 -118760864 - L1MA3 LINE L1 0 6305 4127 43204 43 3 1 chr5 80870093 80876236 -118753914 + L1PA4 LINE L1 2 6155 0 230 225 38 50 chr5 80876495 80876575 -118753575 + MER20B DNA MER1_type 65 143 -640 2686 156 79 0 chr5 80877276 80877744 -118752406 - L1M3f LINE L1 -4820 508 4 590 86 46 29 chr5 80878060 80878234 -118751916 + (TA)n Simple_repeat Simple_repeat 2 178 0 2093 122 10 0 chr5 80879095 80879389 -118750761 + AluSx SINE Alu 1 297 -15 470 216 0 44 chr5 80879391 80879572 -118750578 + GA-rich Low_complexity Low_complexity 3 175 0 252 135 0 0 chr5 80879572 80879609 -118750541 + (GGGGA)n Simple_repeat Simple_repeat 4 40 0 458 277 71 0 chr5 80879649 80879790 -118750360 + MIR SINE MIR 30 180 -82 263 255 11 53 chr5 80879981 80880075 -118750075 - L2 LINE L2 0 3272 3183 30 0 0 0 chr5 80880607 80880637 -118749513 + AT_rich Low_complexity Low_complexity 1 30 0 1858 134 0 21 chr5 80880693 80880976 -118749174 - AluSx SINE Alu 0 312 36 914 249 79 51 chr5 80881402 80881795 -118748355 - MLT1E2 LTR MaLR -209 417 14 640 275 122 18 chr5 80882722 80882951 -118747199 - MIR SINE MIR 0 262 10 274 267 93 12 chr5 80883022 80883108 -118747042 - MIR3 SINE MIR -14 194 102 2321 108 71 8 chr5 80883432 80883785 -118746365 - THE1C LTR MaLR 0 375 1 21 57 0 0 chr5 80884718 80884753 -118745397 + AT_rich Low_complexity Low_complexity 1 35 0 2049 129 0 7 chr5 80885707 80886010 -118744140 - AluSx SINE Alu -11 301 1 2417 87 3 3 chr5 80886903 80887213 -118742937 + AluSx SINE Alu 1 310 -2 1585 151 27 51 chr5 80888126 80888358 -118741792 + MER33 DNA MER1_type 1 224 -2361 1780 126 71 4 chr5 80888358 80888627 -118741523 + AluJb SINE Alu 4 290 -22 1585 151 27 51 chr5 80888627 80888726 -118741424 + MER33 DNA MER1_type 224 324 0 516 204 155 7 chr5 80888900 80889042 -118741108 - MARNA DNA Mariner -359 227 65 653 293 59 24 chr5 80891125 80891378 -118738772 + MIR SINE MIR 1 262 0 330 309 17 51 chr5 80892300 80892475 -118737675 + LTR16C LTR ERVL 288 456 -35 912 73 0 0 chr5 80892599 80892709 -118737441 + AluSc SINE Alu 3 112 -197 6298 144 42 17 chr5 80892712 80893733 -118736417 - L1M1 LINE L1 -6358 1207 161 861 180 11 28 chr5 80893751 80893929 -118736221 - L1 LINE L1 -3210 2936 2762 918 103 100 184 chr5 80893929 80894250 -118735900 - MER33 DNA MER1_type -30 294 1 1086 260 240 36 chr5 80894252 80894868 -118735282 - L2 LINE L2 -2407 907 166 1013 101 16 0 chr5 80895128 80895257 -118734893 - FLAM_C SINE Alu -2 131 1 2204 75 0 34 chr5 80895718 80896056 -118734094 + AluSg SINE Alu 1 328 0 204 158 0 0 chr5 80896931 80896969 -118733181 + (TG)n Simple_repeat Simple_repeat 1 38 0 581 178 93 0 chr5 80896997 80897115 -118733035 + L1MC3 LINE L1 7651 7779 -6 2010 145 0 0 chr5 80897706 80898016 -118732134 + AluSx SINE Alu 1 310 0 621 239 146 50 chr5 80898333 80898655 -118731495 + L2 LINE L2 2930 3282 -31 2281 125 49 0 chr5 80899552 80899896 -118730254 + MER46B DNA MER2_type 1 236 0 1662 141 58 4 chr5 80900556 80900832 -118729318 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr5 80901074 80901096 -118729054 + AT_rich Low_complexity Low_complexity 1 22 0 23 78 0 0 chr5 80901197 80901248 -118728902 + AT_rich Low_complexity Low_complexity 1 51 0 1798 193 0 7 chr5 80901254 80901554 -118728596 + AluJo SINE Alu 2 299 -13 2553 36 7 3 chr5 80902093 80902396 -118727754 + AluY SINE Alu 1 304 -7 246 347 31 0 chr5 80903612 80903710 -118726440 + MIR SINE MIR 30 130 -78 2174 90 0 0 chr5 80903914 80904192 -118725958 - AluSx SINE Alu 0 312 35 214 175 25 0 chr5 80904194 80904234 -118725916 - MER5B DNA MER1_type -137 41 1 828 200 82 0 chr5 80904577 80904747 -118725403 + MER5A DNA MER1_type 1 184 -5 3839 204 22 51 chr5 80905154 80906152 -118723998 - LTR5 LTR ERVK 0 969 1 21 0 0 0 chr5 80907875 80907896 -118722254 + AT_rich Low_complexity Low_complexity 1 21 0 216 295 126 11 chr5 80908491 80908586 -118721564 + L2 LINE L2 3164 3269 -3 398 65 290 0 chr5 80908816 80908878 -118721272 + MADE1 DNA Mariner 1 80 0 1147 163 4 73 chr5 80909153 80909399 -118720751 - AluJo SINE Alu 0 312 84 207 100 0 0 chr5 80909572 80909602 -118720548 + (T)n Simple_repeat Simple_repeat 1 30 0 345 296 95 82 chr5 80909602 80909906 -118720244 + L1ME LINE L1 516 823 -5573 1731 217 46 83 chr5 80909915 80910528 -118719622 + L1ME LINE L1 748 1287 -5119 2223 125 0 6 chr5 80910528 80910840 -118719310 + AluSx SINE Alu 1 310 -2 1731 217 46 83 chr5 80910840 80911154 -118718996 + L1ME LINE L1 1287 1611 -4795 * 1981 233 47 12 chr5 80911150 80911661 -118718489 + L1ME1 LINE L1 5621 6149 -17 318 208 104 10 chr5 80912459 80912555 -118717595 - L1M4 LINE L1 -1050 5096 4992 4555 165 15 39 chr5 80912578 80913187 -118716963 - L1MB7 LINE L1 -16 6168 5585 1736 201 87 11 chr5 80913187 80913555 -118716595 + MSTD LTR MaLR 1 396 0 4555 165 15 39 chr5 80913555 80913854 -118716296 - L1MB7 LINE L1 -599 5585 5281 512 252 39 58 chr5 80913854 80914060 -118716090 - L1M4 LINE L1 -1142 5004 4803 405 214 0 0 chr5 80914064 80914148 -118716002 - L1M4 LINE L1 -1381 4765 4682 805 170 116 132 chr5 80914184 80914451 -118715699 + MLT1E2 LTR MaLR 1 264 -362 2291 68 7 26 chr5 80914451 80914760 -118715390 - AluY SINE Alu -8 303 1 805 170 116 132 chr5 80914760 80914810 -118715340 + MLT1E2 LTR MaLR 264 313 -313 6397 195 25 19 chr5 80914811 80916715 -118713435 + L1M3f LINE L1 12 1917 -4065 736 152 8 181 chr5 80916715 80916952 -118713198 + MLT1E2 LTR MaLR 280 475 -30 1253 210 58 46 chr5 80916970 80917232 -118712918 - L1M4 LINE L1 -2368 3778 3509 2101 97 7 0 chr5 80917232 80917532 -118712618 - AluSx SINE Alu 0 302 1 1253 210 58 46 chr5 80917532 80917616 -118712534 - L1M4 LINE L1 -2637 3509 3427 30 27 0 0 chr5 80917714 80917751 -118712399 + AT_rich Low_complexity Low_complexity 1 37 0 882 224 56 52 chr5 80918190 80918422 -118711728 + MER20B DNA MER1_type 92 324 -459 766 214 131 0 chr5 80918517 80918746 -118711404 + MER20B DNA MER1_type 519 777 -6 186 71 0 0 chr5 80920454 80920482 -118709668 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2319 135 8 27 chr5 80922190 80922561 -118707589 - THE1B LTR MaLR 0 364 1 2192 132 0 0 chr5 80922962 80923272 -118706878 + AluSx SINE Alu 1 310 -2 381 202 48 0 chr5 80923490 80923574 -118706576 - MIR SINE MIR -96 166 79 355 321 18 0 chr5 80923958 80924067 -118706083 + L2 LINE L2 3203 3313 0 226 297 148 20 chr5 80924401 80924502 -118705648 - L2 LINE L2 -21 3292 3179 262 272 104 90 chr5 80924647 80924926 -118705224 - L2 LINE L2 -346 2968 2686 1136 164 0 0 chr5 80925095 80925266 -118704884 + AluJb SINE Alu 129 299 -13 371 311 71 44 chr5 80927903 80927999 -118702151 - MIR SINE MIR -7 255 163 1933 156 99 26 chr5 80927999 80928421 -118701729 + MSTB2 LTR MaLR 1 453 -4 371 311 71 44 chr5 80928421 80928549 -118701601 - MIR SINE MIR -99 163 25 26 0 0 0 chr5 80930089 80930115 -118700035 + AT_rich Low_complexity Low_complexity 1 26 0 572 279 27 45 chr5 80930333 80930555 -118699595 - L2 LINE L2 -1 3312 3095 282 235 69 20 chr5 80930654 80930756 -118699394 + Charlie7 DNA MER1_type 1 107 -2505 388 146 117 10 chr5 80930757 80930860 -118699290 + Charlie7 DNA MER1_type 2440 2553 -59 593 207 77 40 chr5 80931038 80931128 -118699022 + L1MC4 LINE L1 7812 7897 -145 219 69 0 0 chr5 80931128 80931157 -118698993 + (TG)n Simple_repeat Simple_repeat 2 30 0 593 207 77 40 chr5 80931157 80931288 -118698862 + L1MC4 LINE L1 7897 8041 -1 352 315 0 9 chr5 80931292 80931400 -118698750 + Charlie8 DNA MER1_type 140 246 -2171 331 250 0 0 chr5 80931436 80931500 -118698650 + Charlie8 DNA MER1_type 1365 1428 -989 24 96 0 0 chr5 80931562 80931635 -118698515 + AT_rich Low_complexity Low_complexity 1 73 0 280 221 139 0 chr5 80932381 80932434 -118697716 - L1ME4a LINE L1 -19 6102 6058 2455 94 0 0 chr5 80932434 80932742 -118697408 + AluSx SINE Alu 1 308 -4 280 221 139 0 chr5 80932742 80932810 -118697340 - L1ME4a LINE L1 -63 6058 5964 4173 134 23 3 chr5 80933094 80933734 -118696416 + MER39B LTR ERV1 1 653 0 253 259 173 41 chr5 80933748 80933968 -118696182 - L1ME4a LINE L1 -2214 5594 5346 2014 182 0 0 chr5 80934260 80934568 -118695582 - AluSx SINE Alu -4 308 1 22 35 0 0 chr5 80935526 80935555 -118694595 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr5 80936319 80936346 -118693804 + AT_rich Low_complexity Low_complexity 1 27 0 2300 108 0 0 chr5 80936364 80936660 -118693490 + AluJo SINE Alu 1 296 -16 3225 234 85 34 chr5 80937375 80937829 -118692321 - L1MEc LINE L1 -5164 1232 803 2172 106 0 0 chr5 80937829 80938135 -118692015 + AluSx SINE Alu 1 306 0 3225 234 85 34 chr5 80938135 80938451 -118691699 - L1MEc LINE L1 -5593 803 505 1893 158 33 27 chr5 80938451 80938786 -118691364 - MER1B DNA MER1_type 0 337 1 3225 234 85 34 chr5 80938786 80939151 -118690999 - L1MEc LINE L1 -5891 505 37 431 335 84 13 chr5 80939313 80939540 -118690610 - HAL1b LINE L1 -580 768 526 2094 143 0 0 chr5 80939550 80939843 -118690307 + AluSx SINE Alu 1 293 -19 25 31 0 0 chr5 80939843 80939875 -118690275 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 80940080 80940101 -118690049 + AT_rich Low_complexity Low_complexity 1 21 0 462 181 52 107 chr5 80940234 80940395 -118689755 - L1M4 LINE L1 -3237 2909 2767 1789 170 0 27 chr5 80940395 80940689 -118689461 - AluJo SINE Alu -24 288 3 462 181 52 107 chr5 80940689 80940797 -118689353 - L1M4 LINE L1 -3379 2767 2655 232 171 0 71 chr5 80940859 80940929 -118689221 + T-rich Low_complexity Low_complexity 4 68 0 22 35 0 0 chr5 80940937 80940966 -118689184 + AT_rich Low_complexity Low_complexity 1 29 0 446 294 88 69 chr5 80941200 80941723 -118688427 - HAL1b LINE L1 -604 744 204 2710 10 0 0 chr5 80941723 80942019 -118688131 + AluYa5 SINE Alu 1 296 -15 446 294 88 69 chr5 80942019 80942166 -118687984 - HAL1b LINE L1 -1144 204 61 1933 55 0 0 chr5 80942556 80942813 -118687337 + L1P LINE L1 2484 2740 -3406 400 319 52 65 chr5 80943790 80944038 -118686112 + MIR SINE MIR 11 255 -7 496 326 163 5 chr5 80944730 80944951 -118685199 + MIR SINE MIR 7 262 0 377 264 258 0 chr5 80945797 80945964 -118684186 - MIR SINE MIR -50 212 3 393 148 0 172 chr5 80946650 80946772 -118683378 + L1M4 LINE L1 4855 4955 -1191 6010 194 23 5 chr5 80946781 80947901 -118682249 + L1MA5 LINE L1 6 1145 -6023 1726 180 17 11 chr5 80947901 80948257 -118681893 + L1MA5 LINE L1 2710 3067 -4101 1416 219 39 10 chr5 80948244 80948628 -118681522 + L1MA5 LINE L1 3786 4180 -2987 * 42296 37 3 2 chr5 80948642 80954806 -118675344 + L1PA3 LINE L1 9 6172 0 9751 153 55 13 chr5 80954819 80955430 -118674720 + L1MA5 LINE L1 4187 4771 -2550 1873 179 3 0 chr5 80955430 80955727 -118674423 + AluJb SINE Alu 1 298 -14 9751 153 55 13 chr5 80955727 80958110 -118672040 + L1MA5 LINE L1 4771 7319 -2 4435 171 33 9 chr5 80958124 80959315 -118670835 + L1MB8 LINE L1 4947 6170 -8 634 192 69 8 chr5 80959320 80959450 -118670700 + MER5B DNA MER1_type 40 177 -1 650 218 160 0 chr5 80959556 80959712 -118670438 + MER5A DNA MER1_type 9 189 0 837 178 61 6 chr5 80959720 80959883 -118670267 - MER5B DNA MER1_type 0 178 7 204 163 0 0 chr5 80960064 80960107 -118670043 + A-rich Low_complexity Low_complexity 1 43 0 198 0 0 0 chr5 80960737 80960759 -118669391 + (TG)n Simple_repeat Simple_repeat 1 22 0 1759 183 0 13 chr5 80961509 80961695 -118668455 - AluJo SINE Alu -9 303 121 423 0 0 0 chr5 80961695 80961742 -118668408 + (TAG)n Simple_repeat Simple_repeat 1 47 0 1759 183 0 13 chr5 80961742 80961861 -118668289 - AluJo SINE Alu -191 121 2 290 246 0 0 chr5 80962816 80962873 -118667277 + MIR3 SINE MIR 126 182 -26 248 277 133 54 chr5 80963666 80963832 -118666318 + MIR3 SINE MIR 5 183 -25 1011 196 62 36 chr5 80965040 80965346 -118664804 + MER33 DNA MER1_type 2 315 -9 2154 120 144 5 chr5 80965755 80966131 -118664019 + MSTA LTR MaLR 1 428 0 315 295 39 0 chr5 80967042 80967120 -118663030 + MIR3 SINE MIR 121 201 -7 210 71 0 0 chr5 80967892 80967920 -118662230 + (GGGA)n Simple_repeat Simple_repeat 4 31 0 3007 174 67 21 chr5 80967920 80968227 -118661923 + L1MB2 LINE L1 5485 5776 -395 417 39 0 0 chr5 80968227 80968278 -118661872 + (TA)n Simple_repeat Simple_repeat 1 51 0 3007 174 67 21 chr5 80968278 80968626 -118661524 + L1MB2 LINE L1 5776 6170 -1 316 220 13 153 chr5 80968655 80968805 -118661345 + L2 LINE L2 3183 3311 -2 220 231 90 26 chr5 80971112 80971190 -118658960 - MIR3 SINE MIR -12 196 114 242 270 84 61 chr5 80971559 80971721 -118658429 + MIR3 SINE MIR 3 164 -70 2047 142 19 138 chr5 80973577 80974148 -118656002 - MLT1D LTR MaLR -2 503 1 257 164 16 145 chr5 80974600 80974733 -118655417 - HAL1b LINE L1 -29 1319 1202 424 254 53 0 chr5 80974733 80974847 -118655303 - L1M4 LINE L1 -2077 4069 3950 446 242 45 38 chr5 80975117 80975249 -118654901 + MLT1E3 LTR MaLR 62 194 -430 2001 140 0 7 chr5 80975364 80975656 -118654494 + AluSx SINE Alu 1 290 -22 360 221 131 41 chr5 80976356 80976501 -118653649 + L2 LINE L2 3153 3310 -3 2230 124 7 0 chr5 80976530 80976836 -118653314 + AluSg SINE Alu 1 308 -2 401 245 11 0 chr5 80978355 80978449 -118651701 - MER5A DNA MER1_type -85 104 10 1702 168 171 16 chr5 80978607 80978981 -118651169 - MSTB1 LTR MaLR 0 432 1 2360 98 3 0 chr5 80979938 80980244 -118649906 + AluY SINE Alu 1 307 -4 2111 121 6 10 chr5 80981436 80981749 -118648401 + AluSq SINE Alu 1 312 -1 273 253 113 60 chr5 80981928 80981997 -118648153 - L1MC4a LINE L1 -1911 5897 5833 1224 168 23 0 chr5 80981997 80982211 -118647939 + MER20 DNA MER1_type 1 219 0 273 253 113 60 chr5 80982211 80982291 -118647859 - L1MC4a LINE L1 -1975 5833 5740 1454 102 0 0 chr5 80982296 80982483 -118647667 - AluSg/x SINE Alu -14 296 110 1608 139 45 112 chr5 80982574 80982961 -118647189 - MLT1A1 LTR MaLR -3 454 1 192 313 170 9 chr5 80983140 80983252 -118646898 - L2 LINE L2 -18 3254 3125 1303 64 0 35 chr5 80984099 80984272 -118645878 + AluY SINE Alu 144 310 -1 2017 141 0 7 chr5 80984903 80985187 -118644963 - AluSx SINE Alu -30 282 1 2079 127 0 29 chr5 80985208 80985524 -118644626 - AluSx SINE Alu -5 307 1 2131 194 118 38 chr5 80985986 80986518 -118643632 - MLT1E2 LTR MaLR 0 626 52 277 253 176 0 chr5 80986737 80986828 -118643322 - L2 LINE L2 -20 3252 3146 211 284 459 0 chr5 80987508 80987617 -118642533 + MER91A DNA MER1_type 4 162 -34 311 319 150 6 chr5 80988116 80988276 -118641874 - MER5A DNA MER1_type 0 189 7 1379 171 8 0 chr5 80989268 80989502 -118640648 - AluJb SINE Alu -13 299 64 1778 103 46 0 chr5 80990049 80990310 -118639840 + AluSx SINE Alu 40 312 0 1993 137 7 0 chr5 80990373 80990651 -118639499 - AluJb SINE Alu -24 288 9 351 0 0 0 chr5 80990738 80990777 -118639373 + (TG)n Simple_repeat Simple_repeat 2 40 0 200 306 121 16 chr5 80992107 80992231 -118637919 - L2 LINE L2 -2 3270 3134 285 292 47 118 chr5 80993986 80994349 -118635801 + L2 LINE L2 2924 3260 -12 604 183 64 146 chr5 80994909 80995237 -118634913 + L1MC5 LINE L1 7613 7913 -48 2940 0 0 0 chr5 80995248 80995555 -118634595 - AluYa5 SINE Alu -4 307 1 488 251 103 41 chr5 80997293 80997466 -118632684 - MIR SINE MIR -63 145 18 188 306 0 0 chr5 80999466 80999515 -118630635 + L2 LINE L2 3258 3306 -7 262 266 16 0 chr5 80999523 80999587 -118630563 + L2 LINE L2 3208 3272 0 232 293 0 0 chr5 81000599 81000657 -118629493 + MIR3 SINE MIR 119 176 -32 502 264 98 114 chr5 81000886 81001387 -118628763 - L2 LINE L2 0 3313 2821 500 275 199 34 chr5 81001387 81001743 -118628407 - MLT1J2 LTR MaLR -3 447 33 23 0 0 0 chr5 81002740 81002763 -118627387 + AT_rich Low_complexity Low_complexity 1 23 0 2274 119 0 7 chr5 81003028 81003330 -118626820 - AluSx SINE Alu -12 300 1 594 108 0 0 chr5 81006105 81006188 -118623962 + AluSc SINE Alu 2 84 -225 2765 10 0 3 chr5 81006189 81006486 -118623664 + AluYa5 SINE Alu 2 297 -14 1869 64 9 0 chr5 81006486 81006704 -118623446 + AluSc SINE Alu 71 292 -17 244 262 0 0 chr5 81006741 81006802 -118623348 - MIR SINE MIR -17 245 185 650 219 137 17 chr5 81008236 81008469 -118621681 - MIR SINE MIR 0 262 2 209 271 0 29 chr5 81008724 81008794 -118621356 + CT-rich Low_complexity Low_complexity 3 70 0 21 0 0 0 chr5 81009457 81009478 -118620672 + AT_rich Low_complexity Low_complexity 1 21 0 259 302 28 9 chr5 81010699 81010805 -118619345 - MIR SINE MIR -58 204 97 1497 97 21 51 chr5 81010901 81010965 -118619185 - MER30 DNA MER1_type 0 230 166 2223 119 0 0 chr5 81010965 81011260 -118618890 - AluSx SINE Alu -14 298 4 1497 97 21 51 chr5 81011260 81011432 -118618718 - MER30 DNA MER1_type -64 166 1 192 289 96 39 chr5 81012685 81012789 -118617361 + MIR SINE MIR 153 262 0 223 305 24 0 chr5 81012862 81012944 -118617206 - MIR SINE MIR -105 157 74 514 255 40 17 chr5 81012946 81013146 -118617004 - MIR SINE MIR -17 245 1 320 274 26 35 chr5 81013386 81013499 -118616651 - L3 LINE CR1 -109 1468 1357 214 277 336 0 chr5 81013514 81013633 -118616517 + MIR SINE MIR 104 262 0 275 274 111 0 chr5 81014062 81014179 -118615971 + L1ME4a LINE L1 5968 6097 -24 1292 167 17 135 chr5 81014428 81014776 -118615374 + AluJo SINE Alu 1 307 -5 493 221 44 15 chr5 81015979 81016115 -118614035 + L1MB8 LINE L1 4663 4802 -1344 630 103 103 0 chr5 81016124 81016221 -118613929 + AluSq/x SINE Alu 12 118 -194 414 0 0 0 chr5 81016222 81016268 -118613882 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 759 219 0 12 chr5 81016289 81016453 -118613697 + L1MB8 LINE L1 4794 4955 -1191 1476 163 79 25 chr5 81016457 81016734 -118613416 + AluJo SINE Alu 5 296 -16 2943 166 22 49 chr5 81016735 81017368 -118612782 + L1MB8 LINE L1 5542 6157 -21 21 0 0 0 chr5 81017377 81017398 -118612752 + AT_rich Low_complexity Low_complexity 1 21 0 896 224 37 33 chr5 81017441 81017682 -118612468 - MLT1D LTR MaLR -263 242 1 237 203 31 16 chr5 81017848 81017912 -118612238 + L1M4 LINE L1 2627 2691 -3455 1030 254 80 36 chr5 81017973 81018129 -118612021 + L1M4 LINE L1 3071 3219 -2927 2436 84 0 3 chr5 81018129 81018428 -118611722 + AluSg SINE Alu 1 298 -12 1030 254 80 36 chr5 81018428 81018720 -118611430 + L1M4 LINE L1 3219 3539 -2607 2048 117 0 0 chr5 81018726 81019016 -118611134 - L1M1 LINE L1 -480 5823 5534 257 241 45 18 chr5 81019226 81019338 -118610812 + L1MC4 LINE L1 7928 8042 0 228 200 0 0 chr5 81021879 81021929 -118608221 + GA-rich Low_complexity Low_complexity 2 51 0 510 202 9 37 chr5 81022216 81022325 -118607825 - MER20B DNA MER1_type -608 175 70 1633 179 26 16 chr5 81024177 81024485 -118605665 - AluJo SINE Alu -1 311 1 2298 110 3 0 chr5 81025354 81025654 -118604496 - AluSx SINE Alu -10 302 2 604 220 13 13 chr5 81025779 81025929 -118604221 + L1MB5 LINE L1 6024 6173 -1 246 150 0 0 chr5 81025939 81025979 -118604171 + L1MB7 LINE L1 6136 6175 -9 2275 186 147 6 chr5 81026114 81026610 -118603540 - MLT1F1 LTR MaLR -1 566 1 361 281 90 39 chr5 81026713 81026882 -118603268 + MIR3 SINE MIR 62 256 -6 250 246 0 0 chr5 81027015 81027080 -118603070 - MIR SINE MIR -14 248 184 883 142 0 8 chr5 81027103 81027237 -118602913 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr5 81027237 81027258 -118602892 + AT_rich Low_complexity Low_complexity 1 21 0 1863 138 27 20 chr5 81027729 81028026 -118602124 + AluJb SINE Alu 1 299 -13 2196 157 58 30 chr5 81028033 81028548 -118601602 - MLT2A2 LTR ERVL 0 554 1 241 278 96 0 chr5 81028926 81029041 -118601109 - L1ME4a LINE L1 -4 6117 5992 2131 56 4 4 chr5 81029880 81030148 -118600002 - AluY SINE Alu 0 311 44 1979 146 0 29 chr5 81030280 81030595 -118599555 + AluJb SINE Alu 1 306 -6 2897 69 62 60 chr5 81031746 81032042 -118598108 + MER4C LTR ERV1 1 300 -165 2212 116 7 0 chr5 81032042 81032334 -118597816 - AluSx SINE Alu -18 294 1 2897 69 62 60 chr5 81032334 81032501 -118597649 + MER4C LTR ERV1 300 465 0 1569 112 40 4 chr5 81032849 81033099 -118597051 - AluSx SINE Alu -53 259 1 761 58 90 51 chr5 81033099 81033255 -118596895 + MER4C LTR ERV1 304 465 0 1713 134 106 0 chr5 81034522 81034801 -118595349 - AluSx SINE Alu 0 306 1 1995 143 20 0 chr5 81034962 81035256 -118594894 + AluSx SINE Alu 1 300 -12 2047 100 14 7 chr5 81035432 81035722 -118594428 + AluSc SINE Alu 5 296 -13 2229 135 0 0 chr5 81036416 81036719 -118593431 - AluSx SINE Alu -7 305 3 263 259 148 7 chr5 81037111 81037246 -118592904 - L3b LINE CR1 -245 1338 1185 217 394 56 0 chr5 81037257 81037417 -118592733 + L2 LINE L2 2886 3054 -218 1578 174 138 14 chr5 81039868 81040310 -118589840 - LTR54B LTR ERV1 -1 497 1 2288 92 34 0 chr5 81040681 81040974 -118589176 + AluSp SINE Alu 1 303 -10 2046 120 29 0 chr5 81041080 81041412 -118588738 - AluSx SINE Alu 0 340 1 213 292 45 22 chr5 81041790 81041879 -118588271 - L2 LINE L2 -188 3084 2994 2177 103 0 50 chr5 81042126 81042447 -118587703 + AluSx SINE Alu 1 305 -7 415 319 111 49 chr5 81043133 81043681 -118586469 - L2 LINE L2 -1215 2099 1518 188 125 83 62 chr5 81043842 81043890 -118586260 - MIR SINE MIR -57 205 157 1174 167 32 122 chr5 81044051 81044452 -118585698 + MLT1A1 LTR MaLR 1 365 0 2212 100 0 4 chr5 81044741 81045078 -118585072 - AluSc SINE Alu 0 336 1 239 269 250 25 chr5 81045357 81045517 -118584633 - MARNA DNA Mariner -348 238 43 245 282 310 3 chr5 81047638 81047925 -118582225 + L3 LINE CR1 1171 1545 -32 225 154 96 0 chr5 81048176 81048228 -118581922 + L1ME2 LINE L1 6108 6164 0 * 373 253 77 32 chr5 81048203 81048424 -118581726 + L1MC4 LINE L1 7808 8038 -4 599 285 31 26 chr5 81048534 81048727 -118581423 - MIR SINE MIR -41 221 28 1539 137 93 79 chr5 81049387 81049638 -118580512 - MER7A DNA MER2_type -2692 346 89 2061 120 3 48 chr5 81049638 81049947 -118580203 + AluSx SINE Alu 5 299 -13 1539 137 93 79 chr5 81049947 81050038 -118580112 - MER7A DNA MER2_type -2949 89 1 2302 110 7 0 chr5 81051046 81051347 -118578803 + AluSx SINE Alu 1 303 -9 201 230 104 126 chr5 81051827 81051874 -118578276 - MIR3 SINE MIR -28 180 133 777 188 34 11 chr5 81051874 81052050 -118578100 - L1MB3 LINE L1 0 6183 6004 201 230 104 126 chr5 81052050 81052137 -118578013 - MIR3 SINE MIR -75 133 49 544 316 136 3 chr5 81052228 81052604 -118577546 + L3 LINE CR1 1085 1510 -67 407 143 116 116 chr5 81052846 81052892 -118577258 - MER112 DNA MER1_type -43 217 172 2322 97 0 28 chr5 81052892 81053212 -118576938 + AluSx SINE Alu 1 311 -1 407 143 116 116 chr5 81053212 81053354 -118576796 - MER112 DNA MER1_type -87 173 29 200 98 0 24 chr5 81053779 81053820 -118576330 + (CA)n Simple_repeat Simple_repeat 1 40 0 189 0 0 0 chr5 81054556 81054577 -118575573 + (TG)n Simple_repeat Simple_repeat 1 21 0 308 289 148 7 chr5 81054695 81054830 -118575320 + MIR SINE MIR 52 205 -57 336 214 24 12 chr5 81054909 81054993 -118575157 - L1ME2 LINE L1 -135 6029 5945 211 306 31 31 chr5 81054999 81055097 -118575053 + MIR SINE MIR 47 144 -118 816 216 0 0 chr5 81055127 81055280 -118574870 + FRAM SINE Alu 1 153 -23 1947 114 11 11 chr5 81055471 81055774 -118574376 - AluSg SINE Alu 0 314 12 349 258 23 100 chr5 81055822 81056041 -118574109 - MLT1J LTR MaLR -252 259 17 289 308 136 76 chr5 81058443 81058693 -118571457 + L2 LINE L2 3007 3271 -1 496 231 22 60 chr5 81059635 81059817 -118570333 + HAL1 LINE L1 2114 2288 -219 745 225 87 126 chr5 81059842 81059986 -118570164 - L1M4 LINE L1 -3173 2973 2825 2258 70 0 11 chr5 81059986 81060300 -118569850 - AluY SINE Alu 0 311 1 745 225 87 126 chr5 81060300 81060615 -118569535 - L1M4 LINE L1 -3321 2825 2549 1778 134 0 0 chr5 81060615 81060868 -118569282 + AluJb SINE Alu 60 312 0 745 225 87 126 chr5 81060868 81061139 -118569011 - L1M4 LINE L1 -3597 2549 2269 512 193 0 0 chr5 81061169 81061257 -118568893 - AluJ/FLAM SINE Alu -223 89 2 1636 166 3 83 chr5 81061462 81061800 -118568350 - AluJo SINE Alu -1 311 1 246 343 29 0 chr5 81061817 81061922 -118568228 - L1ME LINE L1 -5953 117 10 1837 137 0 43 chr5 81062084 81062384 -118567766 + AluJb SINE Alu 13 299 -13 372 303 103 13 chr5 81063290 81063590 -118566560 - L2 LINE L2 -51 3262 2936 255 211 248 0 chr5 81065264 81065373 -118564777 + MIR3 SINE MIR 36 171 -37 1625 199 126 124 chr5 81065379 81065463 -118564687 - Charlie2 DNA MER1_type -8 2854 2772 1645 148 49 4 chr5 81065463 81065726 -118564424 + AluSx SINE Alu 1 275 -37 360 0 0 0 chr5 81065729 81065769 -118564381 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 1625 199 126 124 chr5 81065769 81066324 -118563826 - Charlie2 DNA MER1_type -91 2771 2219 1726 151 45 10 chr5 81066324 81066616 -118563534 - AluJb SINE Alu -10 302 1 1625 199 126 124 chr5 81066616 81066784 -118563366 - Charlie2 DNA MER1_type -643 2219 2053 1870 146 7 3 chr5 81066784 81067072 -118563078 + AluSx SINE Alu 1 289 -23 1625 199 126 124 chr5 81067072 81067109 -118563041 - Charlie2 DNA MER1_type -809 2053 2018 1402 153 130 12 chr5 81067109 81067363 -118562787 + AluSg SINE Alu 1 284 -26 1625 199 126 124 chr5 81067363 81067508 -118562642 - Charlie2 DNA MER1_type -844 2018 1856 523 301 68 17 chr5 81067629 81067805 -118562345 - Charlie2 DNA MER1_type -2550 312 128 2620 143 57 7 chr5 81067900 81068637 -118561513 - LTR1B LTR ERV1 0 826 14 440 316 96 14 chr5 81068932 81069223 -118560927 - L1MC4a LINE L1 -1857 5951 5637 888 151 0 0 chr5 81069240 81069366 -118560784 - AluSq/x SINE Alu -186 126 1 670 204 91 98 chr5 81069500 81069926 -118560224 - MLT1F1 LTR MaLR 0 567 141 369 234 57 78 chr5 81070004 81070145 -118560005 - MLT1F1 LTR MaLR -404 191 54 276 179 179 11 chr5 81070284 81070379 -118559771 - L1MC4a LINE L1 -2402 5406 5296 366 344 61 5 chr5 81070443 81070655 -118559495 - L1MC4a LINE L1 -884 5262 5039 2220 99 0 14 chr5 81071135 81071428 -118558722 + AluSx SINE Alu 20 308 -4 1371 188 91 67 chr5 81072261 81072666 -118557484 + MLT1C LTR MaLR 53 467 0 491 214 31 104 chr5 81073297 81073389 -118556761 - MER45A DNA AcHobo -1403 178 106 4832 81 5 3 chr5 81073389 81074055 -118556095 + L1MA3 LINE L1 5639 6305 0 491 214 31 104 chr5 81074055 81074154 -118555996 - MER45A DNA AcHobo -1475 106 1 2407 104 0 0 chr5 81074658 81074967 -118555183 - AluSc SINE Alu 0 309 1 23 0 0 0 chr5 81075088 81075111 -118555039 + AT_rich Low_complexity Low_complexity 1 23 0 2054 116 0 3 chr5 81076379 81076695 -118553455 - AluSx SINE Alu 0 315 1 2311 101 0 7 chr5 81076698 81077004 -118553146 - AluSc SINE Alu -3 306 3 579 132 24 96 chr5 81077451 81077662 -118552488 + AluSg/x SINE Alu 130 328 0 204 158 0 0 chr5 81078539 81078577 -118551573 + (TG)n Simple_repeat Simple_repeat 1 38 0 521 178 93 0 chr5 81078605 81078723 -118551427 + L1MC3 LINE L1 7651 7779 -6 1761 106 3 88 chr5 81079314 81079653 -118550497 + AluSq SINE Alu 1 310 -3 271 200 40 27 chr5 81079984 81080059 -118550091 - L1ME3A LINE L1 -53 6117 6042 900 109 0 36 chr5 81080199 81080337 -118549813 - FLAM_C SINE Alu 0 133 1 747 191 32 42 chr5 81080520 81080709 -118549441 - MER97c DNA MER1_type? -660 430 244 238 267 10 30 chr5 81080796 81080897 -118549253 + MLT1L LTR MaLR 507 605 -10 424 367 39 4 chr5 81080951 81081180 -118548970 + L2 LINE L2 1795 2031 -1283 362 261 109 29 chr5 81081203 81081341 -118548809 + L2 LINE L2 3165 3313 0 1420 197 103 14 chr5 81081595 81081955 -118548195 + MSTD LTR MaLR 1 392 -4 21 0 0 0 chr5 81082010 81082031 -118548119 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr5 81083919 81083949 -118546201 + AT_rich Low_complexity Low_complexity 1 30 0 1871 134 0 21 chr5 81084005 81084288 -118545862 - AluSx SINE Alu 0 312 36 778 249 79 51 chr5 81084714 81085107 -118545043 - MLT1E2 LTR MaLR -209 417 14 651 275 122 18 chr5 81086034 81086263 -118543887 - MIR SINE MIR 0 262 10 279 277 79 20 chr5 81086319 81086420 -118543730 - MIR3 SINE MIR 0 208 102 2149 108 71 8 chr5 81086744 81087097 -118543053 - THE1C LTR MaLR 0 375 1 21 57 0 0 chr5 81088032 81088067 -118542083 + AT_rich Low_complexity Low_complexity 1 35 0 2008 129 0 10 chr5 81089022 81089325 -118540825 - AluSx SINE Alu -12 300 1 2357 96 3 3 chr5 81090218 81090530 -118539620 + AluSx SINE Alu 1 312 0 301 245 129 109 chr5 81090989 81091283 -118538867 - L1ME LINE L1 -5482 588 289 1419 146 27 60 chr5 81091437 81091669 -118538481 + MER33 DNA MER1_type 1 220 -2365 1745 132 71 4 chr5 81091669 81091935 -118538215 + AluJb SINE Alu 4 287 -25 1419 146 27 60 chr5 81091935 81092037 -118538113 + MER33 DNA MER1_type 220 324 0 456 192 161 8 chr5 81092223 81092353 -118537797 - MARNA DNA Mariner -372 214 65 551 293 59 24 chr5 81094432 81094685 -118535465 + MIR SINE MIR 1 262 0 272 309 17 51 chr5 81095607 81095782 -118534368 + LTR16C LTR ERVL 288 456 -35 2155 103 0 10 chr5 81095952 81096243 -118533907 + AluSx SINE Alu 3 290 -22 769 249 112 42 chr5 81096354 81096828 -118533322 - HAL1 LINE L1 -1006 1501 995 314 281 118 77 chr5 81096903 81097124 -118533026 - HAL1 LINE L1 -1536 971 742 728 260 68 18 chr5 81097242 81097469 -118532681 - MIR SINE MIR -12 250 15 1351 149 0 10 chr5 81098118 81098326 -118531824 + AluJb SINE Alu 1 206 -106 25 0 0 0 chr5 81098814 81098839 -118531311 + GC_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 81098867 81098888 -118531262 + GC_rich Low_complexity Low_complexity 1 21 0 566 219 94 40 chr5 81099090 81099314 -118530836 - MLT1D LTR MaLR -264 241 6 517 258 0 45 chr5 81099316 81099448 -118530702 + L2 LINE L2 3187 3312 -1 1986 121 13 10 chr5 81099525 81099823 -118530327 - AluSx SINE Alu -13 299 1 252 0 0 0 chr5 81099882 81099910 -118530240 + (T)n Simple_repeat Simple_repeat 1 28 0 27 49 0 0 chr5 81100229 81100270 -118529880 + AT_rich Low_complexity Low_complexity 1 41 0 599 210 24 18 chr5 81100535 81100702 -118529448 - MLT1J2 LTR MaLR -229 221 54 190 286 60 48 chr5 81100769 81100853 -118529297 - L2 LINE L2 -38 3234 3150 421 258 32 68 chr5 81100978 81101199 -118528951 - LTR33 LTR ERVL 0 521 309 515 142 123 0 chr5 81101319 81101425 -118528725 - MLT1B LTR MaLR -249 141 23 181 268 146 81 chr5 81101534 81101657 -118528493 + L2 LINE L2 3137 3267 -5 355 292 99 6 chr5 81102386 81102557 -118527593 + MIR SINE MIR 64 250 -12 21 36 0 0 chr5 81102785 81102813 -118527337 + AT_rich Low_complexity Low_complexity 1 28 0 222 128 0 0 chr5 81102995 81103034 -118527116 + (TGG)n Simple_repeat Simple_repeat 2 40 0 314 309 58 53 chr5 81103076 81103283 -118526867 - L2 LINE L2 -360 2954 2747 293 304 111 47 chr5 81103980 81104151 -118525999 - MIR3 SINE MIR -8 200 19 1228 231 106 39 chr5 81105541 81105948 -118524202 - MLT2B1 LTR ERVL -2 518 85 944 181 23 0 chr5 81106049 81106226 -118523924 + MLT1B LTR MaLR 210 390 0 870 58 7 36 chr5 81108084 81108221 -118521929 + AluY SINE Alu 24 156 -155 1172 91 0 7 chr5 81108233 81108387 -118521763 + AluYa5 SINE Alu 139 291 -20 1075 234 56 20 chr5 81108650 81108954 -118521196 + MER21B LTR ERV1 491 805 -58 2181 115 3 7 chr5 81109475 81109770 -118520380 - AluSx SINE Alu -18 294 1 323 253 81 77 chr5 81109856 81110117 -118520033 + L1MC4a LINE L1 5680 5941 -1867 188 65 0 32 chr5 81111520 81111551 -118518599 + (TA)n Simple_repeat Simple_repeat 1 30 0 2278 104 0 0 chr5 81111923 81112265 -118517885 + AluSx SINE Alu 14 355 0 270 171 86 0 chr5 81112291 81112361 -118517789 + L1ME4a LINE L1 5628 5703 -418 489 269 140 19 chr5 81112437 81112701 -118517449 + L1ME4a LINE L1 5811 6106 -15 650 206 8 0 chr5 81112721 81112847 -118517303 - FLAM_A SINE Alu -7 135 9 325 267 112 9 chr5 81113789 81113905 -118516245 - MIR SINE MIR -48 214 87 6508 41 3 5 chr5 81114112 81114969 -118515181 - L1PA3 LINE L1 -1 6154 5299 4447 44 1 7 chr5 81114970 81115974 -118514176 + L1PA6 LINE L1 4813 5809 -346 530 42 0 14 chr5 81116018 81116090 -118514060 + L1PA6 LINE L1 5788 5858 -296 1216 248 59 50 chr5 81116327 81116786 -118513364 + MLT1J LTR MaLR 1 463 -48 629 308 48 69 chr5 81116911 81117392 -118512758 + LTR67 LTR ERVL 85 555 -2 273 228 114 163 chr5 81117404 81117527 -118512623 + L2 LINE L2 3140 3256 -16 21 0 0 0 chr5 81117530 81117551 -118512599 + AT_rich Low_complexity Low_complexity 1 21 0 216 348 76 6 chr5 81117574 81117732 -118512418 + L2 LINE L2 1828 1996 -1318 189 0 0 0 chr5 81117749 81117770 -118512380 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 506 296 22 65 chr5 81117813 81118043 -118512107 + L2 LINE L2 2158 2377 -937 30 59 0 0 chr5 81118369 81118420 -118511730 + AT_rich Low_complexity Low_complexity 1 51 0 4756 127 24 18 chr5 81119247 81120522 -118509628 - L1MA2 LINE L1 -78 7643 6383 2036 109 35 40 chr5 81120521 81120925 -118509225 - L1MA2 LINE L1 -4390 3175 2774 * 3163 189 34 6 chr5 81120929 81121581 -118508569 - MER52A LTR ERV1 -5 1750 1081 23 33 0 0 chr5 81122070 81122100 -118508050 + AT_rich Low_complexity Low_complexity 1 30 0 21175 133 63 30 chr5 81122100 81128002 -118502148 - L1PA5 LINE L1 -2 6152 7 1155 66 0 0 chr5 81128004 81128140 -118502010 - AluY SINE Alu -175 136 1 1964 114 21 4 chr5 81128409 81128689 -118501461 - AluSx SINE Alu -27 285 1 206 316 38 0 chr5 81128730 81128809 -118501341 + L2 LINE L2 3220 3301 -12 225 0 0 0 chr5 81128934 81128959 -118501191 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 704 113 0 28 chr5 81129453 81129559 -118500591 + LTR32 LTR ERVL 356 458 -13 1426 153 88 29 chr5 81129752 81130026 -118500124 - AluJo SINE Alu -22 290 1 1989 75 8 11 chr5 81130322 81130587 -118499563 + AluY SINE Alu 20 283 -28 246 347 31 0 chr5 81131830 81131928 -118498222 + MIR SINE MIR 30 130 -78 2156 93 0 0 chr5 81132134 81132412 -118497738 - AluSx SINE Alu 0 312 35 214 175 25 0 chr5 81132414 81132454 -118497696 - MER5B DNA MER1_type -137 41 1 828 200 82 0 chr5 81132797 81132967 -118497183 + MER5A DNA MER1_type 1 184 -5 3820 203 22 52 chr5 81133373 81134372 -118495778 - LTR5 LTR ERVK 0 969 1 1309 191 58 4 chr5 81135799 81136024 -118494126 - MER8 DNA MER2_type -1 238 2 246 299 60 0 chr5 81136372 81136439 -118493711 - L2 LINE L2 -2 3270 3200 235 261 113 56 chr5 81136720 81136862 -118493288 - L2 LINE L2 -127 3145 2996 24 0 0 0 chr5 81137354 81137378 -118492772 + AT_rich Low_complexity Low_complexity 1 24 0 376 296 38 0 chr5 81137392 81137524 -118492626 - MIR SINE MIR -13 249 113 2047 135 6 28 chr5 81137910 81138229 -118491921 - AluSx SINE Alu 0 312 1 22 0 0 0 chr5 81138402 81138424 -118491726 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr5 81138614 81138640 -118491510 + AT_rich Low_complexity Low_complexity 1 26 0 205 239 56 183 chr5 81139050 81139230 -118490920 + L2 LINE L2 2989 3145 -127 305 329 123 6 chr5 81139787 81139957 -118490193 - MIR3 SINE MIR -6 202 13 3161 110 5 12 chr5 81140081 81140510 -118489640 - MSTA LTR MaLR 0 428 3 10127 160 22 2 chr5 81140517 81142129 -118488021 - MSTA-int LTR MaLR -5 1646 2 3183 103 14 7 chr5 81142130 81142555 -118487595 - MSTA LTR MaLR 0 428 1 400 307 73 0 chr5 81143263 81143400 -118486750 - MIR SINE MIR -66 196 50 202 254 34 17 chr5 81143400 81143459 -118486691 - L2 LINE L2 -9 3263 3204 229 360 142 29 chr5 81143763 81144107 -118486043 + L2 LINE L2 2474 2856 -458 416 239 78 67 chr5 81144109 81144289 -118485861 - L2 LINE L2 -11 3302 3121 3956 214 75 39 chr5 81144289 81144591 -118485559 + L1ME1 LINE L1 3717 4007 -2159 1639 90 0 53 chr5 81144591 81144836 -118485314 + AluSc SINE Alu 78 309 0 3956 214 75 39 chr5 81144836 81146278 -118483872 + L1ME1 LINE L1 4007 5395 -771 1055 204 111 5 chr5 81146278 81146494 -118483656 - MER8 DNA MER2_type 0 239 1 3956 214 75 39 chr5 81146494 81146620 -118483530 + L1ME1 LINE L1 5395 5515 -651 1581 170 38 4 chr5 81146620 81146885 -118483265 - AluJb SINE Alu -23 289 16 3956 214 75 39 chr5 81146885 81147262 -118482888 + L1ME1 LINE L1 5515 6166 0 200 196 0 20 chr5 81147497 81147548 -118482602 + CT-rich Low_complexity Low_complexity 1 50 0 181 315 27 41 chr5 81147694 81147767 -118482383 - MIR SINE MIR -114 148 77 350 252 63 54 chr5 81147995 81148106 -118482044 - MER5B DNA MER1_type 0 178 67 785 219 33 33 chr5 81148108 81148164 -118481986 - MER5A DNA MER1_type -5 184 129 2138 132 0 0 chr5 81148164 81148453 -118481697 + AluSx SINE Alu 1 289 -23 240 100 0 0 chr5 81148453 81148493 -118481657 + (TAGA)n Simple_repeat Simple_repeat 4 43 0 785 219 33 33 chr5 81148493 81148618 -118481532 - MER5A DNA MER1_type -58 131 2 693 159 63 122 chr5 81148704 81148893 -118481257 - MER5B DNA MER1_type 0 178 1 229 295 0 0 chr5 81149055 81149116 -118481034 - MIR SINE MIR 0 262 202 257 209 15 0 chr5 81149287 81149354 -118480796 + GA-rich Low_complexity Low_complexity 1 68 0 317 267 9 19 chr5 81150466 81150571 -118479579 + MIR3 SINE MIR 86 189 -19 1060 190 22 0 chr5 81152042 81152226 -118477924 - MER5A DNA MER1_type -1 188 1 268 284 155 9 chr5 81154136 81154252 -118475898 - MIR SINE MIR -119 143 11 250 331 92 24 chr5 81154312 81154465 -118475685 + MIR SINE MIR 1 154 -54 835 164 0 20 chr5 81155739 81155885 -118474265 - FLAM_C SINE Alu 0 143 1 194 222 139 56 chr5 81156162 81156234 -118473916 - L2 LINE L2 -3 3310 3233 2309 99 7 0 chr5 81156396 81156700 -118473450 - AluSp SINE Alu -7 306 1 29 0 0 0 chr5 81156916 81156945 -118473205 + AT_rich Low_complexity Low_complexity 1 29 0 208 263 0 63 chr5 81157296 81157391 -118472759 - MIR3 SINE MIR -19 189 101 285 299 163 0 chr5 81158101 81158248 -118471902 + MIR SINE MIR 92 262 0 21 57 0 0 chr5 81158306 81158341 -118471809 + AT_rich Low_complexity Low_complexity 1 35 0 2283 104 23 10 chr5 81158927 81159235 -118470915 + AluSx SINE Alu 1 312 0 193 264 0 19 chr5 81159815 81159868 -118470282 - L3 LINE CR1 0 1577 1526 270 293 131 30 chr5 81159870 81159969 -118470181 - MER5A DNA MER1_type -2 187 79 429 234 197 0 chr5 81159978 81160115 -118470035 - MER5A DNA MER1_type 0 189 26 284 264 176 16 chr5 81160134 81160259 -118469891 - MIR3 SINE MIR -48 160 16 24 0 0 0 chr5 81161582 81161606 -118468544 + AT_rich Low_complexity Low_complexity 1 24 0 1530 168 48 7 chr5 81162219 81162511 -118467639 + AluJo SINE Alu 1 304 -8 2659 43 0 0 chr5 81163333 81163636 -118466514 + AluY SINE Alu 1 303 -8 247 310 126 0 chr5 81163987 81164074 -118466076 - MIR SINE MIR -145 117 20 530 292 128 9 chr5 81164537 81164763 -118465387 + MIR SINE MIR 7 259 -3 390 256 33 58 chr5 81165224 81165345 -118464805 + MER5A DNA MER1_type 21 138 -51 1943 147 15 96 chr5 81165379 81165786 -118464364 + MLT1A2 LTR MaLR 1 374 0 241 290 14 0 chr5 81165867 81165936 -118464214 + MER5A DNA MER1_type 120 189 0 2260 155 43 50 chr5 81166382 81166759 -118463391 + L1M4 LINE L1 4392 4767 -1379 1917 152 27 0 chr5 81166759 81167055 -118463095 + AluSx SINE Alu 1 304 -8 2260 155 43 50 chr5 81167055 81167160 -118462990 + L1M4 LINE L1 4767 4871 -1275 2688 223 87 45 chr5 81167160 81167351 -118462799 + MER21B LTR ERV1 1 183 -680 7880 33 1 1 chr5 81167351 81168293 -118461857 + L1PA3 LINE L1 5228 6169 0 2688 223 87 45 chr5 81168293 81168862 -118461288 + MER21B LTR ERV1 183 794 -69 2525 198 4 2 chr5 81168893 81169397 -118460753 + L1M4 LINE L1 4866 5370 -776 183 379 166 0 chr5 81169617 81169762 -118460388 + L2 LINE L2 2435 2603 -711 299 286 12 0 chr5 81169816 81169900 -118460250 + L2 LINE L2 3226 3310 -3 2134 114 3 19 chr5 81170270 81170577 -118459573 + AluSq SINE Alu 1 302 -11 195 100 0 0 chr5 81170710 81170740 -118459410 + (TC)n Simple_repeat Simple_repeat 1 30 0 23 0 0 0 chr5 81171264 81171287 -118458863 + AT_rich Low_complexity Low_complexity 1 23 0 1981 128 11 0 chr5 81174613 81174935 -118455215 - AluSx SINE Alu 0 325 1 1638 157 36 18 chr5 81174937 81175211 -118454939 - AluJb SINE Alu -15 297 19 254 288 168 8 chr5 81176378 81176503 -118453647 + MER5A DNA MER1_type 42 186 -3 388 269 207 0 chr5 81176703 81176848 -118453302 - MIR SINE MIR -14 248 74 249 33 0 0 chr5 81177312 81177342 -118452808 + (CA)n Simple_repeat Simple_repeat 2 31 0 472 300 7 7 chr5 81177951 81178091 -118452059 + MER117 DNA MER1_type 53 192 -5 418 261 22 60 chr5 81178350 81178484 -118451666 + MIR SINE MIR 16 144 -64 246 206 16 16 chr5 81179009 81179072 -118451078 + L2 LINE L2 2225 2287 -1027 370 236 0 65 chr5 81179742 81179865 -118450285 + L1MC4 LINE L1 6589 6703 -1339 419 250 6 0 chr5 81179867 81180031 -118450119 + (TA)n Simple_repeat Simple_repeat 2 166 0 319 214 0 82 chr5 81180036 81180134 -118450016 + L1MC4 LINE L1 6614 6703 -1339 235 250 0 0 chr5 81180138 81180194 -118449956 + (TA)n Simple_repeat Simple_repeat 2 57 0 318 296 16 48 chr5 81180195 81180320 -118449830 + L1MC4 LINE L1 6583 6703 -1339 408 142 18 35 chr5 81180324 81180437 -118449713 + (CATATA)n Simple_repeat Simple_repeat 2 112 0 256 286 0 0 chr5 81180439 81180530 -118449620 + L1MC4 LINE L1 6613 6703 -1339 352 247 22 0 chr5 81180555 81180644 -118449506 + L1MC4 LINE L1 6613 6703 -1339 204 235 0 0 chr5 81180648 81180716 -118449434 + (TA)n Simple_repeat Simple_repeat 2 69 0 357 261 0 22 chr5 81180722 81180814 -118449336 + L1MC4 LINE L1 6614 6703 -1339 317 260 0 58 chr5 81180833 81180937 -118449213 + L1MC4 LINE L1 6613 6710 -1332 1355 165 145 0 chr5 81180937 81181186 -118448964 - AluJb SINE Alu -27 285 1 267 31 0 0 chr5 81181704 81181736 -118448414 + (TA)n Simple_repeat Simple_repeat 1 32 0 1325 263 17 48 chr5 81181800 81182218 -118447932 + L2 LINE L2 2349 2753 -561 771 283 68 33 chr5 81182220 81182701 -118447449 + LTR16A LTR ERVL 1 451 -13 714 254 85 28 chr5 81182716 81182836 -118447314 + L2 LINE L2 3047 3159 -154 192 77 0 0 chr5 81182836 81182862 -118447288 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 714 254 85 28 chr5 81182862 81182989 -118447161 + L2 LINE L2 3159 3308 -5 1820 179 125 15 chr5 81183309 81183718 -118446432 + MSTB2 LTR MaLR 3 456 -1 732 257 53 119 chr5 81183825 81184086 -118446064 + L2 LINE L2 2883 3103 -210 1845 156 3 14 chr5 81184086 81184374 -118445776 - AluSx SINE Alu -25 287 3 732 257 53 119 chr5 81184374 81184567 -118445583 + L2 LINE L2 3103 3307 -6 2024 224 101 10 chr5 81184732 81185308 -118444842 - L1ME3A LINE L1 -102 6068 5441 592 290 43 39 chr5 81186542 81186797 -118443353 + MIR SINE MIR 3 258 -4 195 256 51 64 chr5 81187312 81187390 -118442760 - MIR3 SINE MIR -36 172 96 221 280 40 67 chr5 81188195 81188270 -118441880 + L2 LINE L2 3200 3272 0 2254 108 3 0 chr5 81188524 81188830 -118441320 + AluSx SINE Alu 2 308 -4 209 206 132 15 chr5 81188956 81189024 -118441126 + MIR SINE MIR 157 232 -30 2383 72 0 3 chr5 81190147 81190439 -118439711 - AluSq SINE Alu -16 297 7 413 205 70 51 chr5 81190469 81190625 -118439525 - L1ME4a LINE L1 -3 6118 5960 225 267 167 0 chr5 81193126 81193246 -118436904 - L1ME4a LINE L1 -118 6003 5864 312 70 0 0 chr5 81193614 81193657 -118436493 + (TA)n Simple_repeat Simple_repeat 1 43 0 190 281 79 22 chr5 81194289 81194378 -118435772 + MIR3 SINE MIR 112 205 -3 706 206 15 0 chr5 81194715 81194846 -118435304 + FLAM_A SINE Alu 1 133 0 1239 146 10 10 chr5 81195461 81195666 -118434484 + AluJo SINE Alu 1 205 -107 981 245 28 64 chr5 81195854 81196181 -118433969 - MER46C DNA MER2_type 0 338 24 267 229 157 36 chr5 81196536 81196619 -118433531 - MER5A DNA MER1_type -96 93 1 354 250 78 23 chr5 81197488 81197616 -118432534 + MER5B DNA MER1_type 39 173 -5 2071 100 4 7 chr5 81197724 81198027 -118432123 + AluSx SINE Alu 16 317 0 370 333 34 11 chr5 81198162 81198339 -118431811 + L2 LINE L2 2856 3036 -236 186 352 40 32 chr5 81199210 81199335 -118430815 + MIR3 SINE MIR 4 129 -79 212 189 0 0 chr5 81199675 81199712 -118430438 + (TTA)n Simple_repeat Simple_repeat 3 39 0 228 188 42 0 chr5 81200248 81200296 -118429854 + MER112 DNA MER1_type 3 52 -208 2364 84 0 0 chr5 81200396 81200692 -118429458 + AluSg SINE Alu 1 296 -14 2527 52 0 3 chr5 81201058 81201364 -118428786 + AluY SINE Alu 1 305 -6 304 220 0 0 chr5 81201407 81201466 -118428684 + MER103 DNA DNA 2 60 -106 949 87 7 14 chr5 81202879 81203017 -118427133 - AluSp SINE Alu -176 137 1 2005 222 12 63 chr5 81203108 81203126 -118427024 - L1P LINE L1 -2451 3695 3678 609 156 78 0 chr5 81203126 81203254 -118426896 - L1MA8 LINE L1 -5 6286 6149 2005 222 12 63 chr5 81203254 81203735 -118426415 - L1P LINE L1 -2468 3678 3230 2066 135 21 9 chr5 81203735 81204060 -118426090 + L1PB1 LINE L1 5822 6150 -1 2005 222 12 63 chr5 81204060 81204163 -118425987 - L1P LINE L1 -2916 3230 3123 311 296 81 81 chr5 81204703 81205011 -118425139 + L1M2 LINE L1 821 1128 -5721 789 273 138 15 chr5 81205453 81205786 -118424364 + L2 LINE L2 2124 2497 -817 1818 121 4 0 chr5 81205787 81206035 -118424115 - AluSx SINE Alu -53 259 11 1939 145 3 0 chr5 81206120 81206409 -118423741 + AluSx SINE Alu 1 290 -22 204 79 0 53 chr5 81208047 81208085 -118422065 + (TCTA)n Simple_repeat Simple_repeat 1 36 0 2423 66 0 0 chr5 81209070 81209357 -118420793 - AluY SINE Alu -24 287 1 493 242 89 19 chr5 81209991 81210148 -118420002 + MIR SINE MIR 78 245 -17 223 288 91 15 chr5 81210553 81210619 -118419531 - MIR3 SINE MIR -7 201 131 698 208 0 0 chr5 81211213 81211333 -118418817 + FLAM_A SINE Alu 1 120 -13 28 0 0 0 chr5 81211762 81211790 -118418360 + AT_rich Low_complexity Low_complexity 1 28 0 2368 71 0 0 chr5 81211790 81212070 -118418080 - AluSg SINE Alu -30 280 1 817 130 23 23 chr5 81214107 81214238 -118415912 + AluJo SINE Alu 4 134 -178 1906 126 65 0 chr5 81214601 81214894 -118415256 - AluJb SINE Alu 0 312 1 24 0 0 0 chr5 81214944 81214968 -118415182 + AT_rich Low_complexity Low_complexity 1 24 0 2249 90 30 0 chr5 81215355 81215655 -118414495 + AluSq SINE Alu 1 309 -4 261 0 0 0 chr5 81215655 81215684 -118414466 + (TA)n Simple_repeat Simple_repeat 1 29 0 381 335 41 12 chr5 81215978 81216148 -118414002 + MIR3 SINE MIR 19 193 -15 2239 88 30 0 chr5 81217110 81217405 -118412745 + AluSq SINE Alu 1 304 -9 381 335 41 12 chr5 81217715 81217885 -118412265 + MIR3 SINE MIR 19 193 -15 610 204 112 20 chr5 81218725 81218877 -118411273 + MLT1J LTR MaLR 346 511 0 28 0 0 0 chr5 81218879 81218907 -118411243 + AT_rich Low_complexity Low_complexity 1 28 0 199 345 0 12 chr5 81218961 81219045 -118411105 - L2 LINE L2 0 3313 3231 2167 212 27 12 chr5 81219149 81219631 -118410519 - L1M4 LINE L1 -2215 3931 3443 395 290 9 77 chr5 81220126 81220265 -118409885 + MIR SINE MIR 35 155 -107 1514 185 0 53 chr5 81220265 81220584 -118409566 - AluJo SINE Alu -10 302 1 395 290 9 77 chr5 81220584 81220665 -118409485 + MIR SINE MIR 155 240 -22 223 276 13 26 chr5 81220666 81220742 -118409408 + MIR SINE MIR 188 262 0 461 302 0 36 chr5 81221620 81221759 -118408391 - L2 LINE L2 -3 3269 3136 217 217 250 0 chr5 81221908 81222028 -118408122 - L2 LINE L2 -3 3310 3161 259 286 33 121 chr5 81222274 81222547 -118407603 - L2 LINE L2 -429 2885 2637 803 94 0 0 chr5 81223839 81223935 -118406215 + AluSg SINE Alu 33 128 -182 1513 98 5 0 chr5 81223935 81224138 -118406012 + AluSq SINE Alu 99 302 -11 2320 96 0 3 chr5 81224148 81224449 -118405701 + AluSx SINE Alu 1 300 -12 538 209 174 0 chr5 81226259 81226455 -118403695 + L1MC4 LINE L1 7006 7235 -807 2022 259 110 18 chr5 81226547 81227565 -118402585 - Charlie7 DNA MER1_type 0 2612 1427 394 160 60 30 chr5 81227704 81227804 -118402346 - Charlie7 DNA MER1_type -2470 142 40 2423 78 3 0 chr5 81228215 81228509 -118401641 + AluSc SINE Alu 1 295 -14 1689 167 14 4 chr5 81228516 81228797 -118401353 + AluJo SINE Alu 1 284 -28 378 42 0 0 chr5 81228797 81228845 -118401305 + (CA)n Simple_repeat Simple_repeat 2 49 0 1570 167 51 11 chr5 81229210 81229511 -118400639 + AluJo SINE Alu 1 312 0 414 297 136 26 chr5 81229620 81229893 -118400257 + L2 LINE L2 2922 3224 -89 2347 98 7 0 chr5 81230384 81230689 -118399461 + AluSc SINE Alu 1 307 -2 576 219 92 24 chr5 81230837 81231001 -118399149 - MIR SINE MIR -56 206 32 1875 177 3 0 chr5 81231643 81231943 -118398207 + AluJb SINE Alu 1 301 -11 5965 99 28 39 chr5 81231948 81232328 -118397822 - Tigger3b DNA MER2_type -2081 947 565 2105 136 0 0 chr5 81232328 81232622 -118397528 - AluSx SINE Alu -18 294 1 5965 99 28 39 chr5 81232622 81232781 -118397369 - Tigger3b DNA MER2_type -2463 565 406 2196 119 23 0 chr5 81232781 81233084 -118397066 - AluSx SINE Alu -2 310 1 5965 99 28 39 chr5 81233084 81233499 -118396651 - Tigger3b DNA MER2_type -2622 406 2 3525 205 107 35 chr5 81233543 81233862 -118396288 - L1MC4 LINE L1 -155 7887 7592 2320 76 0 30 chr5 81233862 81234166 -118395984 - AluY SINE Alu -16 295 1 3525 205 107 35 chr5 81234166 81234791 -118395359 - L1MC4 LINE L1 -450 7592 6875 232 321 123 19 chr5 81235046 81235152 -118394998 + MIR SINE MIR 30 146 -62 1973 148 14 7 chr5 81235493 81235790 -118394360 - AluSx SINE Alu -13 299 1 452 217 0 50 chr5 81235929 81236049 -118394101 - MIR SINE MIR -50 212 99 337 284 63 0 chr5 81236068 81236163 -118393987 + L2 LINE L2 3172 3272 0 1024 292 76 22 chr5 81236309 81236798 -118393352 + L1MC4a LINE L1 5384 5898 -1910 357 289 114 85 chr5 81237011 81237565 -118392585 + L1M2 LINE L1 754 1323 -5526 335 249 24 37 chr5 81237612 81237777 -118392373 - MIR SINE MIR -46 162 3 1592 77 14 10 chr5 81239197 81239406 -118390744 + L1PA12 LINE L1 5959 6168 0 2347 102 3 3 chr5 81239557 81239870 -118390280 + AluSq SINE Alu 1 313 0 2314 116 0 0 chr5 81240535 81240836 -118389314 - AluSx SINE Alu -11 301 1 312 258 53 68 chr5 81240972 81241104 -118389046 + L2 LINE L2 3164 3293 -20 280 178 41 41 chr5 81241447 81241520 -118388630 + LTR67 LTR ERVL 106 178 -379 410 274 85 98 chr5 81242276 81242564 -118387586 + MLT1J LTR MaLR 17 267 -183 1179 206 18 5 chr5 81242564 81242782 -118387368 - MER58A DNA MER1_type -3 221 1 410 274 85 98 chr5 81242782 81242954 -118387196 + MLT1J LTR MaLR 267 440 -10 326 274 97 8 chr5 81243219 81243343 -118386807 - L2 LINE L2 -226 3087 2953 4038 126 62 27 chr5 81243343 81244041 -118386109 - LTR1 LTR ERV1 0 785 64 444 227 76 36 chr5 81244123 81244315 -118385835 + MIR SINE MIR 2 203 -59 244 200 36 0 chr5 81244365 81244420 -118385730 - MLT1L LTR MaLR -50 565 509 378 304 16 52 chr5 81244482 81244676 -118385474 - MLT1J LTR MaLR -214 297 111 488 182 23 0 chr5 81245393 81245569 -118384581 + (CA)n Simple_repeat Simple_repeat 1 180 0 427 285 19 31 chr5 81246061 81246220 -118383930 + MIR3 SINE MIR 40 210 -47 1831 155 21 0 chr5 81247187 81247478 -118382672 + AluSx SINE Alu 1 297 -15 514 304 9 9 chr5 81247670 81247846 -118382304 + MIR SINE MIR 19 192 -62 309 283 158 33 chr5 81247921 81248073 -118382077 - L2 LINE L2 0 3272 3102 1993 118 0 14 chr5 81249151 81249439 -118380711 + AluSg SINE Alu 1 284 -26 207 291 78 43 chr5 81249848 81249989 -118380161 + MIR SINE MIR 98 243 -19 283 191 0 73 chr5 81250638 81250706 -118379444 + MIR3 SINE MIR 121 183 -25 22 56 0 0 chr5 81250706 81250742 -118379408 + AT_rich Low_complexity Low_complexity 1 36 0 1811 135 14 135 chr5 81251586 81251839 -118378311 - MLT1A1 LTR MaLR 0 365 178 1834 107 12 0 chr5 81251839 81252110 -118378040 - AluSg SINE Alu 0 309 36 1811 135 14 135 chr5 81252110 81252269 -118377881 - MLT1A1 LTR MaLR -187 178 1 344 241 20 89 chr5 81252474 81252677 -118377473 - HAL1b LINE L1 -414 934 746 2187 110 3 22 chr5 81252972 81253291 -118376859 + AluSq SINE Alu 1 313 0 235 109 0 0 chr5 81254575 81254621 -118375529 + LTR66 LTR ERVL 394 439 -171 28 29 0 0 chr5 81254902 81254937 -118375213 + AT_rich Low_complexity Low_complexity 1 35 0 2073 137 0 0 chr5 81255471 81255763 -118374387 + AluJb SINE Alu 1 292 -20 432 0 0 0 chr5 81255932 81255980 -118374170 + (TG)n Simple_repeat Simple_repeat 1 48 0 219 69 0 0 chr5 81255983 81256012 -118374138 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 260 340 50 30 chr5 81256320 81256420 -118373730 - L2 LINE L2 -22 3250 3149 900 312 40 12 chr5 81256424 81256751 -118373399 - MARNA DNA Mariner -190 396 61 2372 81 3 0 chr5 81256751 81257048 -118373102 + AluSx SINE Alu 1 298 -14 1787 124 8 11 chr5 81257266 81257532 -118372618 + AluSx SINE Alu 1 265 -47 649 239 78 63 chr5 81257693 81257948 -118372202 - MIR SINE MIR 0 262 4 543 320 103 29 chr5 81258178 81258490 -118371660 - L3 LINE CR1 -14 1563 1229 622 222 84 6 chr5 81258539 81258706 -118371444 + MIR SINE MIR 64 243 -19 274 361 17 0 chr5 81258737 81258856 -118371294 - L3 LINE CR1 -402 1175 1055 1479 127 48 22 chr5 81259051 81259315 -118370835 + AluJb SINE Alu 73 312 0 791 299 138 11 chr5 81260226 81260677 -118369473 + L1MC4a LINE L1 5372 5879 -1929 308 171 159 11 chr5 81260982 81261070 -118369080 + L1MC5 LINE L1 7316 7416 -545 271 233 167 0 chr5 81261135 81261225 -118368925 + L1MC4 LINE L1 7629 7733 -309 201 121 0 0 chr5 81262113 81262146 -118368004 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 2105 133 7 0 chr5 81262250 81262558 -118367592 - AluSq SINE Alu -3 310 1 246 236 181 0 chr5 81262636 81262708 -118367442 + L2 LINE L2 3229 3313 0 2044 158 0 3 chr5 81263066 81263376 -118366774 + AluJb SINE Alu 1 309 -3 43877 32 23 1 chr5 81263484 81269503 -118360647 - L1PA3 LINE L1 0 6155 1 239 0 0 31 chr5 81269726 81269758 -118360392 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 266 258 32 0 chr5 81269758 81269820 -118360330 - L2 LINE L2 -8 3305 3242 507 175 107 0 chr5 81269820 81269923 -118360227 - MER81 DNA DNA 0 114 1 965 281 131 16 chr5 81269942 81270372 -118359778 - L2 LINE L2 -233 3080 2609 519 272 129 13 chr5 81270604 81270836 -118359314 + MIR SINE MIR 4 262 0 2361 100 3 0 chr5 81271287 81271596 -118358554 - AluSg SINE Alu 0 310 1 1364 197 0 19 chr5 81271786 81272055 -118358095 + AluJo SINE Alu 34 297 -15 1068 234 69 7 chr5 81272691 81272982 -118357168 - L1ME3A LINE L1 -1 6169 5861 467 156 220 18 chr5 81273184 81273293 -118356857 - MIR SINE MIR -112 150 20 1745 73 3 60 chr5 81273509 81273809 -118356341 - AluSg SINE Alu -27 283 1 355 303 17 8 chr5 81273809 81273928 -118356222 + MER103 DNA DNA 46 165 -1 24 0 0 0 chr5 81274071 81274095 -118356055 + AT_rich Low_complexity Low_complexity 1 24 0 209 163 20 0 chr5 81274272 81274321 -118355829 + (TA)n Simple_repeat Simple_repeat 2 51 0 840 255 49 97 chr5 81274387 81274853 -118355297 - L2 LINE L2 -1028 2286 1843 417 20 0 0 chr5 81275085 81275135 -118355015 + (TTGG)n Simple_repeat Simple_repeat 2 51 0 2096 122 0 11 chr5 81275135 81275422 -118354728 - AluSx SINE Alu -28 284 1 2106 177 18 31 chr5 81275441 81275838 -118354312 + L1MB4 LINE L1 5729 6121 -59 821 169 0 0 chr5 81275838 81275968 -118354182 + FLAM_C SINE Alu 2 131 -2 2106 177 18 31 chr5 81275968 81276022 -118354128 + L1MB4 LINE L1 6121 6174 -6 21 36 0 0 chr5 81276702 81276730 -118353420 + AT_rich Low_complexity Low_complexity 1 28 0 2194 115 0 10 chr5 81276746 81277050 -118353100 + AluSc SINE Alu 1 301 -8 1784 148 20 36 chr5 81277228 81277531 -118352619 + AluJb SINE Alu 2 299 -13 377 324 50 7 chr5 81278103 81278242 -118351908 + MIR3 SINE MIR 35 179 -29 2090 226 23 70 chr5 81278595 81279156 -118350994 - MLT1F LTR MaLR -7 535 1 25 31 0 0 chr5 81279777 81279809 -118350341 + AT_rich Low_complexity Low_complexity 1 32 0 2066 139 0 31 chr5 81279809 81280126 -118350024 + AluSx SINE Alu 1 307 -5 392 333 43 0 chr5 81280270 81280411 -118349739 - L2 LINE L2 -38 3275 3129 1907 139 0 50 chr5 81281456 81281759 -118348391 + AluSx SINE Alu 5 292 -20 3564 123 55 2 chr5 81281866 81282428 -118347722 + Tigger4(Zombi) DNA MER2_type 1960 2551 -180 536 250 129 30 chr5 81283086 81283318 -118346832 + MER112 DNA MER1_type 2 256 0 270 191 21 0 chr5 81284015 81284062 -118346088 + LTR35 LTR ERV1 444 491 -127 2095 121 28 0 chr5 81284076 81284365 -118345785 + AluSx SINE Alu 1 297 -15 263 310 7 35 chr5 81285575 81285720 -118344430 + GA-rich Low_complexity Low_complexity 4 144 0 295 64 64 0 chr5 81286073 81286120 -118344030 + MER66B LTR ERV1 437 486 0 336 102 0 0 chr5 81286343 81286392 -118343758 + (CAA)n Simple_repeat Simple_repeat 3 51 0 970 106 0 0 chr5 81286554 81286686 -118343464 + AluYa5 SINE Alu 1 132 -179 26 0 0 0 chr5 81287015 81287041 -118343109 + AT_rich Low_complexity Low_complexity 1 26 0 2214 87 0 11 chr5 81287041 81287327 -118342823 - AluSq SINE Alu -30 283 1 312 102 0 0 chr5 81287376 81287425 -118342725 + (CCTA)n Simple_repeat Simple_repeat 4 52 0 216 86 0 0 chr5 81288520 81288555 -118341595 + (T)n Simple_repeat Simple_repeat 1 35 0 2639 58 0 0 chr5 81289467 81289777 -118340373 - AluY SINE Alu 0 311 2 1330 218 66 6 chr5 81289782 81290099 -118340051 - Charlie2 DNA MER1_type -636 2226 1891 1017 184 77 10 chr5 81290104 81290300 -118339850 + AluJo SINE Alu 84 292 -20 497 274 35 132 chr5 81290303 81290643 -118339507 - Charlie2 DNA MER1_type -2511 351 45 239 277 46 0 chr5 81291148 81291213 -118338937 - L2 LINE L2 -1 3271 3204 2116 119 10 0 chr5 81291280 81291573 -118338577 + AluSq SINE Alu 1 296 -17 286 188 73 31 chr5 81291646 81291742 -118338408 + MIR SINE MIR 117 216 -46 217 250 29 44 chr5 81291783 81291851 -118338299 + L2 LINE L2 3206 3272 0 576 211 0 84 chr5 81291925 81292067 -118338083 + FLAM_A SINE Alu 4 133 0 2702 3 0 17 chr5 81292559 81292854 -118337296 + AluYa5 SINE Alu 22 311 0 2266 124 0 3 chr5 81292871 81293178 -118336972 + AluSx SINE Alu 1 306 -6 2254 118 3 3 chr5 81296095 81296401 -118333749 - AluSx SINE Alu -6 306 1 576 211 0 84 chr5 81296896 81297038 -118333112 - FLAM_A SINE Alu 0 133 4 217 250 29 44 chr5 81297112 81297180 -118332970 - L2 LINE L2 0 3272 3206 295 177 83 42 chr5 81297221 81297317 -118332833 - MIR SINE MIR -46 216 117 2099 123 10 0 chr5 81297390 81297683 -118332467 - AluSq SINE Alu -17 296 1 239 277 46 0 chr5 81297750 81297815 -118332335 + L2 LINE L2 3204 3271 -1 497 274 35 132 chr5 81298319 81298659 -118331491 + Charlie2 DNA MER1_type 45 351 -2431 1017 184 77 10 chr5 81298662 81298858 -118331292 - AluJo SINE Alu -20 292 84 1954 191 64 100 chr5 81298863 81299185 -118330965 + Charlie2 DNA MER1_type 1891 2223 -639 2639 58 0 0 chr5 81299185 81299495 -118330655 + AluY SINE Alu 2 311 0 1954 191 64 100 chr5 81299495 81299541 -118330609 + Charlie2 DNA MER1_type 2223 2269 -593 2264 82 10 3 chr5 81299541 81299832 -118330318 + AluSp SINE Alu 1 293 -20 1954 191 64 100 chr5 81299832 81300001 -118330149 + Charlie2 DNA MER1_type 2269 2401 -461 2034 130 3 3 chr5 81300001 81300285 -118329865 - AluSx SINE Alu -27 285 2 1954 191 64 100 chr5 81300285 81300432 -118329718 + Charlie2 DNA MER1_type 2401 2552 -310 380 280 70 30 chr5 81300538 81300694 -118329456 + Charlie2 DNA MER1_type 2551 2699 -163 2441 91 0 0 chr5 81300694 81301002 -118329148 + AluSg SINE Alu 1 308 -2 380 280 70 30 chr5 81301002 81301145 -118329005 + Charlie2 DNA MER1_type 2699 2862 0 264 318 74 11 chr5 81301404 81301593 -118328557 - L2 LINE L2 0 3313 3113 450 255 0 0 chr5 81301632 81301726 -118328424 + MER69 DNA AcHobo 1 94 -1132 326 112 56 9 chr5 81301773 81301880 -118328270 + (CA)n Simple_repeat Simple_repeat 1 112 0 1885 161 90 47 chr5 81301894 81302055 -118328095 + MER69 DNA AcHobo 1995 2148 -378 1209 147 12 164 chr5 81302055 81302396 -118327754 + AluJo SINE Alu 3 291 -11 1885 161 90 47 chr5 81302396 81302471 -118327679 + MER69 DNA AcHobo 2148 2218 -308 2166 69 48 14 chr5 81302471 81302762 -118327388 - AluY SINE Alu -10 301 1 1885 161 90 47 chr5 81302762 81303034 -118327116 + MER69 DNA AcHobo 2218 2526 0 1835 180 3 3 chr5 81303564 81303858 -118326292 - AluJb SINE Alu -18 294 1 327 260 10 10 chr5 81303973 81304077 -118326073 + CT-rich Low_complexity Low_complexity 1 104 0 272 285 227 62 chr5 81304079 81304519 -118325631 - L2 LINE L2 -16 3256 2752 1223 250 75 8 chr5 81304708 81305068 -118325082 - L1MC4a LINE L1 -1892 5916 5533 316 225 11 22 chr5 81305074 81305163 -118324987 - L1MC4a LINE L1 -2351 5457 5370 235 294 185 8 chr5 81305235 81305354 -118324796 - L2 LINE L2 -1 3271 3132 1962 133 18 0 chr5 81305394 81305709 -118324441 + AluSx SINE Alu 1 320 0 326 156 0 0 chr5 81306006 81306051 -118324099 + Alu SINE Alu 1 45 -258 470 183 0 12 chr5 81306230 81306312 -118323838 + AluJ/FLAM SINE Alu 2 82 -230 356 222 157 100 chr5 81306327 81306557 -118323593 - LTR33A LTR ERVL -276 247 5 201 369 18 0 chr5 81306648 81306759 -118323391 + L2 LINE L2 2553 2665 -649 914 195 13 0 chr5 81307201 81307360 -118322790 - AluJb SINE Alu -12 300 140 838 190 92 0 chr5 81307435 81307598 -118322552 + MER58A DNA MER1_type 46 223 -1 223 259 52 0 chr5 81307621 81307679 -118322471 + L2 LINE L2 3204 3264 -8 1203 124 34 149 chr5 81307767 81308122 -118322028 + L1MA4 LINE L1 4135 4448 -1698 1252 113 0 0 chr5 81308131 81308291 -118321859 + AluSg/x SINE Alu 137 296 -16 1883 94 0 250 chr5 81308309 81308583 -118321567 + L1MA4 LINE L1 4485 4538 -1608 2176 122 10 0 chr5 81308583 81308879 -118321271 + AluSx SINE Alu 1 299 -13 1883 94 0 250 chr5 81308879 81309187 -118320963 + L1MA4 LINE L1 4538 4921 -1225 5086 162 46 42 chr5 81309314 81309513 -118320637 + L1MA4 LINE L1 4906 5103 -1197 1831 149 3 17 chr5 81309513 81309815 -118320335 + AluSp SINE Alu 1 298 -15 5086 162 46 42 chr5 81309815 81310350 -118319800 + L1MA4 LINE L1 5103 5635 -665 275 0 29 0 chr5 81310350 81310385 -118319765 + (TA)n Simple_repeat Simple_repeat 2 37 0 5086 162 46 42 chr5 81310385 81310550 -118319600 + L1MA4 LINE L1 5635 5798 -502 1890 136 59 0 chr5 81310550 81310837 -118319313 + AluJb SINE Alu 1 304 -8 5086 162 46 42 chr5 81310837 81311130 -118319020 + L1MA4 LINE L1 5798 6111 -189 2218 103 37 0 chr5 81311130 81311430 -118318720 - AluSx SINE Alu -1 311 1 5086 162 46 42 chr5 81311430 81311614 -118318536 + L1MA4 LINE L1 6111 6293 -7 2287 91 7 3 chr5 81311920 81312218 -118317932 + AluSq SINE Alu 1 299 -14 432 183 98 0 chr5 81312537 81312619 -118317531 - FLAM_A SINE Alu -52 90 1 1619 184 0 21 chr5 81312649 81312931 -118317219 - AluJo SINE Alu -36 276 1 2212 114 17 0 chr5 81312945 81313242 -118316908 - AluSx SINE Alu -10 302 1 279 286 102 10 chr5 81313357 81313455 -118316695 + L1ME LINE L1 5525 5631 -490 717 186 0 8 chr5 81313459 81313588 -118316562 - FLAM_A SINE Alu -3 130 3 1719 149 14 11 chr5 81313805 81314120 -118316030 - AluSx SINE Alu 0 316 1 1845 103 3 134 chr5 81314148 81314507 -118315643 + AluSq SINE Alu 1 312 -1 650 244 23 12 chr5 81315457 81315629 -118314521 - MER5B DNA MER1_type -1 177 4 1722 179 0 32 chr5 81316256 81316568 -118313582 - AluJb SINE Alu -10 302 1 1194 116 21 0 chr5 81316569 81316759 -118313391 - L1MA5 LINE L1 -2 6298 6105 374 107 80 13 chr5 81317065 81317140 -118313010 - L1MC5 LINE L1 -34 7927 7848 2315 97 0 7 chr5 81317258 81317556 -118312594 + AluSq SINE Alu 1 296 -17 2392 102 0 0 chr5 81317647 81317951 -118312199 - AluSq SINE Alu -9 304 1 552 252 66 126 chr5 81318010 81318204 -118311946 - L2 LINE L2 -6 3307 3103 1785 148 14 11 chr5 81318204 81318487 -118311663 + AluSx SINE Alu 3 286 -26 552 252 66 126 chr5 81318487 81318744 -118311406 - L2 LINE L2 -210 3103 2883 2278 92 3 0 chr5 81321779 81322097 -118308053 + AluSq SINE Alu 1 319 0 183 191 44 103 chr5 81322514 81322582 -118307568 + MIR SINE MIR 16 79 -129 24 32 0 0 chr5 81322857 81322888 -118307262 + GC_rich Low_complexity Low_complexity 1 31 0 760 181 55 11 chr5 81322998 81323180 -118306970 + L1 LINE L1 2851 3040 -3106 2384 93 6 3 chr5 81323181 81323493 -118306657 + AluSp SINE Alu 1 313 0 1882 127 76 39 chr5 81323495 81323850 -118306300 + L1MA2 LINE L1 5935 6302 -2 1012 178 0 0 chr5 81323853 81324010 -118306140 + AluJb SINE Alu 129 285 -27 1603 158 79 168 chr5 81324188 81324820 -118305330 - LTR8A LTR ERV1 -118 609 34 245 233 105 35 chr5 81325171 81325257 -118304893 + LTR16B LTR ERVL 2 93 -371 195 42 0 0 chr5 81325654 81325678 -118304472 + (A)n Simple_repeat Simple_repeat 1 24 0 446 310 75 9 chr5 81326246 81326459 -118303691 - MIR SINE MIR 0 262 36 833 438 29 49 chr5 81327002 81327310 -118302840 + AluSx SINE Alu 1 302 0 1974 154 0 3 chr5 81327788 81328099 -118302051 + AluSx SINE Alu 1 310 -2 1205 118 0 11 chr5 81328100 81328278 -118301872 + AluSg/x SINE Alu 120 295 -15 1555 148 67 34 chr5 81328306 81328603 -118301547 + AluJb SINE Alu 3 309 -3 357 309 100 13 chr5 81328700 81328930 -118301220 - L1MC4 LINE L1 0 8042 7793 668 204 161 58 chr5 81328939 81329164 -118300986 + MER97b DNA MER1_type? 14 271 -782 2083 125 10 3 chr5 81329164 81329453 -118300697 - AluSx SINE Alu -21 291 1 668 204 161 58 chr5 81329453 81329487 -118300663 + MER97b DNA MER1_type? 271 300 -753 1109 137 19 34 chr5 81329623 81329828 -118300322 - AluSx SINE Alu -110 202 1 1351 134 0 42 chr5 81329828 81330111 -118300039 - L1 LINE L1 -1391 4755 4485 1690 161 0 47 chr5 81330137 81330436 -118299714 - AluSx SINE Alu -27 285 1 1645 116 0 33 chr5 81330452 81330640 -118299510 - AluSg/x SINE Alu 0 312 141 2161 119 0 7 chr5 81330640 81331010 -118299140 - AluSg SINE Alu 0 310 1 1645 116 0 33 chr5 81331010 81331084 -118299066 - AluSg/x SINE Alu -171 141 66 2322 82 3 7 chr5 81331136 81331427 -118298723 - AluSx SINE Alu -22 290 1 386 184 10 87 chr5 81331588 81331691 -118298459 - AluJb SINE Alu -17 285 191 257 111 37 0 chr5 81331805 81331859 -118298291 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 349 256 0 22 chr5 81331862 81331952 -118298198 - L1MC4 LINE L1 -1340 6702 6615 379 230 6 12 chr5 81331957 81332118 -118298032 + (CATATA)n Simple_repeat Simple_repeat 6 165 0 241 286 0 0 chr5 81332143 81332234 -118297916 - L1MC4 LINE L1 -1339 6703 6613 234 214 0 36 chr5 81332235 81332291 -118297859 + (TATG)n Simple_repeat Simple_repeat 4 57 0 328 269 0 21 chr5 81332291 81332384 -118297766 - L1MC4 LINE L1 -1339 6703 6613 302 248 0 7 chr5 81332395 81332532 -118297618 + (TA)n Simple_repeat Simple_repeat 2 137 0 309 242 0 63 chr5 81332535 81332630 -118297520 - L1MC4 LINE L1 -1340 6702 6614 306 135 0 56 chr5 81332636 81332725 -118297425 + (TATATG)n Simple_repeat Simple_repeat 2 85 0 350 254 0 57 chr5 81332751 81332873 -118297277 - L1MC4 LINE L1 -1339 6703 6589 226 206 16 16 chr5 81333549 81333612 -118296538 - L2 LINE L2 -1027 2287 2225 189 0 0 0 chr5 81334275 81334296 -118295854 + (TTTTA)n Simple_repeat Simple_repeat 3 23 0 1826 94 28 35 chr5 81334306 81334594 -118295556 - AluY SINE Alu -25 286 1 390 269 167 6 chr5 81334737 81334893 -118295257 - MER5A DNA MER1_type 0 189 9 2281 95 13 7 chr5 81335148 81335452 -118294698 - AluSq SINE Alu -7 306 1 583 67 50 45 chr5 81335752 81335931 -118294219 + (TA)n Simple_repeat Simple_repeat 1 180 0 233 191 32 0 chr5 81335931 81335994 -118294156 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 491 32 43 80 chr5 81335995 81336182 -118293968 + (TA)n Simple_repeat Simple_repeat 1 180 0 369 158 30 0 chr5 81336227 81336328 -118293822 + (TA)n Simple_repeat Simple_repeat 1 104 0 303 159 0 0 chr5 81336331 81336375 -118293775 + AluJb SINE Alu 209 252 -50 1313 134 0 47 chr5 81336378 81336405 -118293745 + AluY SINE Alu 88 115 -196 192 40 0 0 chr5 81336405 81336430 -118293720 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1313 134 0 47 chr5 81336430 81336446 -118293704 + AluY SINE Alu 115 130 -181 2158 81 0 49 chr5 81336446 81336754 -118293396 + AluSq SINE Alu 1 293 -20 2615 53 3 0 chr5 81336756 81337060 -118293090 + AluY SINE Alu 1 305 -6 1313 134 0 47 chr5 81337060 81337244 -118292906 + AluY SINE Alu 131 308 -3 299 11 0 144 chr5 81337244 81337418 -118292732 + (GGGAA)n Simple_repeat Simple_repeat 2 150 0 1220 43 4 35 chr5 81337472 81337738 -118292412 + (GGGAA)n Simple_repeat Simple_repeat 1 257 0 245 215 21 43 chr5 81337739 81337832 -118292318 + GA-rich Low_complexity Low_complexity 5 95 0 266 279 0 13 chr5 81339112 81339191 -118290959 - MIR SINE MIR 0 262 185 988 210 33 37 chr5 81339193 81339436 -118290714 + MIR SINE MIR 12 253 -9 2258 102 0 0 chr5 81339469 81339754 -118290396 - AluSx SINE Alu -27 285 1 270 210 0 48 chr5 81339754 81339816 -118290334 - MIR SINE MIR -108 154 96 773 164 8 15 chr5 81339938 81340072 -118290078 - FLAM_A SINE Alu 0 133 1 845 178 13 32 chr5 81340228 81340385 -118289765 - FAM SINE Alu -18 167 14 22 70 0 0 chr5 81340560 81340603 -118289547 + AT_rich Low_complexity Low_complexity 1 43 0 43 25 0 25 chr5 81340630 81340657 -118289493 + AT_rich Low_complexity Low_complexity 1 27 -50 1836 164 13 10 chr5 81340657 81340956 -118289194 + AluJo SINE Alu 1 300 -12 43 25 0 25 chr5 81340956 81340993 -118289157 + AT_rich Low_complexity Low_complexity 27 65 -12 2298 88 0 10 chr5 81340993 81341287 -118288863 + AluSg SINE Alu 1 291 -19 43 25 0 25 chr5 81341287 81341300 -118288850 + AT_rich Low_complexity Low_complexity 65 77 0 201 196 0 0 chr5 81341324 81341370 -118288780 + (CATATA)n Simple_repeat Simple_repeat 1 46 0 1438 54 5 39 chr5 81341824 81342028 -118288122 + AluY SINE Alu 113 309 -2 1308 120 16 0 chr5 81342045 81342229 -118287921 + AluSg/x SINE Alu 109 295 -15 1763 154 11 4 chr5 81342237 81342517 -118287633 - AluJo SINE Alu -30 282 1 1426 161 62 4 chr5 81342791 81343065 -118287085 - L1MC1 LINE L1 -5 6328 6039 23 54 0 0 chr5 81343070 81343107 -118287043 + AT_rich Low_complexity Low_complexity 1 37 0 2332 199 57 48 chr5 81343364 81343924 -118286226 - MER92B LTR ERV1 -1 635 67 2147 135 0 0 chr5 81343924 81344227 -118285923 - AluSx SINE Alu -9 303 1 2332 199 57 48 chr5 81344227 81344295 -118285855 - MER92B LTR ERV1 -569 67 1 752 191 8 0 chr5 81344568 81344699 -118285451 + FLAM_C SINE Alu 1 132 -1 21 0 0 0 chr5 81344717 81344738 -118285412 + AT_rich Low_complexity Low_complexity 1 21 0 2096 86 0 15 chr5 81344774 81345043 -118285107 - AluSg1 SINE Alu -43 266 2 462 287 13 0 chr5 81345142 81345292 -118284858 - MER103 DNA DNA 0 166 15 1544 186 21 0 chr5 81345341 81345631 -118284519 - AluJb SINE Alu -9 303 8 1160 143 91 8 chr5 81345959 81346224 -118283926 - L1MA4 LINE L1 -1 6299 6013 1936 150 47 125 chr5 81346488 81347080 -118283070 - L1MC2 LINE L1 -1 6343 5798 744 179 0 0 chr5 81347080 81347203 -118282947 - FLAM_C SINE Alu -16 127 5 678 138 28 0 chr5 81347207 81347316 -118282834 - L1MC2 LINE L1 -516 5828 5717 1348 265 54 6 chr5 81347431 81348053 -118282097 - HERV16 LTR ERVL -3197 1799 1029 530 160 70 0 chr5 81348715 81348815 -118281335 - 7SLRNA srpRNA srpRNA -1 319 213 1873 137 7 14 chr5 81348834 81349126 -118281024 - AluJb SINE Alu -22 290 1 1361 164 0 9 chr5 81349184 81349410 -118280740 + AluJb SINE Alu 1 224 -88 694 159 6 145 chr5 81349498 81349849 -118280301 - AluYb8 SINE Alu -6 302 1 228 150 50 0 chr5 81349990 81350030 -118280120 + MER57A LTR ERV1 295 336 -67 784 172 8 0 chr5 81350088 81350216 -118279934 + FLAM_C SINE Alu 1 129 -4 1915 154 3 3 chr5 81350439 81350737 -118279413 + AluJb SINE Alu 1 298 -14 364 253 58 19 chr5 81350737 81350891 -118279259 - LTR16B LTR ERVL -14 450 291 378 0 0 0 chr5 81351318 81351360 -118278790 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 405 0 0 0 chr5 81351439 81351484 -118278666 + (TG)n Simple_repeat Simple_repeat 2 46 0 259 262 145 28 chr5 81351947 81352092 -118278058 - MIR3 SINE MIR -8 200 39 890 145 0 0 chr5 81352487 81352618 -118277532 - FLAM_C SINE Alu -1 132 2 432 310 142 31 chr5 81353101 81353453 -118276697 - L2 LINE L2 0 3313 2923 2161 102 7 0 chr5 81353492 81353795 -118276355 + AluSq SINE Alu 1 305 0 881 20 0 0 chr5 81353802 81353901 -118276249 + HY3 scRNA scRNA 2 100 -1 341 287 86 62 chr5 81354049 81354373 -118275777 - L2 LINE L2 -809 2505 2174 22 35 0 0 chr5 81354373 81354402 -118275748 + AT_rich Low_complexity Low_complexity 1 29 0 302 0 0 26 chr5 81354611 81354650 -118275500 + (TG)n Simple_repeat Simple_repeat 2 39 0 1688 169 0 21 chr5 81354676 81354960 -118275190 - AluJo SINE Alu -30 282 5 2084 136 13 0 chr5 81355288 81355589 -118274561 - AluSx SINE Alu -7 305 1 1789 147 31 21 chr5 81355612 81355898 -118274252 - AluJo SINE Alu -23 289 1 223 298 50 71 chr5 81356189 81356330 -118273820 - L2 LINE L2 -12 3301 3164 2210 141 42 60 chr5 81356648 81356696 -118273454 - MSTA LTR MaLR -2 426 379 2288 68 36 0 chr5 81356696 81357006 -118273144 - AluSp SINE Alu 0 320 1 2210 141 42 60 chr5 81357006 81357330 -118272820 - MSTA LTR MaLR -49 379 59 2484 68 0 19 chr5 81357330 81357641 -118272509 - AluY SINE Alu -6 305 1 2210 141 42 60 chr5 81357641 81357699 -118272451 - MSTA LTR MaLR -369 59 1 399 231 73 25 chr5 81357719 81357884 -118272266 - HAL1b LINE L1 -2 6119 1186 2491 81 0 0 chr5 81357928 81358267 -118271883 - AluSc SINE Alu 0 339 1 2187 95 0 0 chr5 81358478 81358793 -118271357 + AluSx SINE Alu 1 315 0 2091 111 3 10 chr5 81358829 81359136 -118271014 - AluSx SINE Alu -7 305 1 1529 83 10 10 chr5 81359138 81359343 -118270807 - AluSc SINE Alu -15 294 90 1059 136 40 6 chr5 81359567 81359743 -118270407 - AluY SINE Alu -129 182 1 751 78 78 0 chr5 81359743 81359858 -118270292 - L1M1 LINE L1 -4404 3161 3038 1088 190 138 0 chr5 81359858 81360090 -118270060 - AluJb SINE Alu -18 294 31 512 122 6 117 chr5 81360098 81360278 -118269872 - AluSg/x SINE Alu -9 303 144 608 113 0 106 chr5 81360310 81360451 -118269699 - AluSg SINE Alu -180 130 5 11566 123 55 39 chr5 81360460 81361338 -118268812 - L1M1 LINE L1 -4522 3043 2181 1828 117 0 0 chr5 81361338 81361586 -118268564 - AluSq SINE Alu -65 248 1 11566 123 55 39 chr5 81361586 81362711 -118267439 - L1M1 LINE L1 -5384 2181 1008 593 219 34 0 chr5 81362773 81362892 -118267258 - FLAM_C SINE Alu -10 123 1 502 211 109 39 chr5 81362959 81363115 -118267035 - FRAM SINE Alu -11 165 1 1128 110 0 26 chr5 81363229 81363428 -118266722 - AluSg/x SINE Alu 0 328 134 1649 201 7 3 chr5 81363509 81363807 -118266343 + AluJb SINE Alu 1 299 -13 2157 123 3 0 chr5 81363957 81364250 -118265900 - AluSq SINE Alu -19 294 1 256 85 220 0 chr5 81364499 81364550 -118265600 - AluJb SINE Alu -1 301 238 7399 164 60 71 chr5 81364550 81366121 -118264029 - MER52A LTR ERV1 0 1755 202 298 217 17 0 chr5 81366562 81366622 -118263528 - MER52A LTR ERV1 -1692 63 3 1517 157 0 39 chr5 81366623 81366878 -118263272 - AluJb SINE Alu -67 245 1 1688 147 51 13 chr5 81367223 81367535 -118262615 + MER4A LTR ERV1 1 324 -340 1051 172 28 0 chr5 81367556 81367567 -118262583 + AluJb SINE Alu 110 119 -193 189 0 0 0 chr5 81367567 81367588 -118262562 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1051 172 28 0 chr5 81367588 81367756 -118262394 + AluJb SINE Alu 119 294 -18 434 113 289 31 chr5 81367838 81367935 -118262215 + MER4C LTR ERV1 294 415 -50 1349 106 0 0 chr5 81367942 81368112 -118262038 - AluSx SINE Alu -142 170 1 386 234 37 9 chr5 81369449 81369556 -118260594 - LTR23 LTR ERV1 -5 432 323 1534 167 60 4 chr5 81369575 81369856 -118260294 - AluJb SINE Alu -7 305 9 829 171 159 91 chr5 81369871 81369987 -118260163 - AluJo SINE Alu -21 291 184 2233 91 39 0 chr5 81369987 81370272 -118259878 - AluSq SINE Alu -17 296 1 1753 187 0 7 chr5 81370272 81370572 -118259578 - AluJb SINE Alu -14 298 1 829 171 159 91 chr5 81370572 81370706 -118259444 - AluJo SINE Alu -127 185 23 206 292 46 69 chr5 81370899 81370936 -118259214 + MIR SINE MIR 126 162 -100 2363 101 10 0 chr5 81370936 81371243 -118258907 + AluSg SINE Alu 1 310 0 206 292 46 69 chr5 81371243 81371335 -118258815 + MIR SINE MIR 162 252 -10 1503 213 42 60 chr5 81371490 81371956 -118258194 + MER39 LTR ERV1 12 698 -9 230 407 52 5 chr5 81371961 81372155 -118257995 + L3 LINE CR1 1321 1523 -54 627 268 71 25 chr5 81372859 81373307 -118256843 + LTR33 LTR ERVL 1 513 -8 1948 166 0 0 chr5 81373635 81373936 -118256214 + AluJb SINE Alu 1 301 -11 1745 125 7 39 chr5 81374038 81374319 -118255831 + AluSx SINE Alu 24 295 -17 2049 134 21 3 chr5 81374468 81374758 -118255392 + AluSx SINE Alu 1 295 -17 2311 110 0 3 chr5 81374760 81375182 -118254968 + AluY SINE Alu 3 423 0 754 197 0 0 chr5 81375260 81375392 -118254758 + FLAM_A SINE Alu 2 133 0 627 245 82 6 chr5 81375443 81375602 -118254548 - MLT1F LTR MaLR -371 171 1 1841 157 0 42 chr5 81375720 81376032 -118254118 + AluJb SINE Alu 1 299 -13 1751 161 3 41 chr5 81376967 81377283 -118252867 + AluJb SINE Alu 1 304 -8 514 322 37 19 chr5 81377474 81377688 -118252462 + MLT1H LTR MaLR 86 303 -246 399 214 23 84 chr5 81377725 81377795 -118252355 + MLT1H LTR MaLR 464 524 -71 2113 80 80 3 chr5 81377795 81378084 -118252066 - AluY SINE Alu 0 311 1 399 214 23 84 chr5 81378084 81378144 -118252006 + MLT1H LTR MaLR 524 586 -9 1741 199 0 0 chr5 81378151 81378447 -118251703 + AluSx SINE Alu 1 296 -16 2579 81 0 0 chr5 81378453 81378763 -118251387 + AluSg SINE Alu 1 310 0 2006 144 30 0 chr5 81378766 81379064 -118251086 + AluSx SINE Alu 2 308 -4 366 330 9 9 chr5 81379335 81379450 -118250700 - MER5B DNA MER1_type 0 178 64 2263 115 0 10 chr5 81379699 81380013 -118250137 - AluSx SINE Alu -1 311 1 1441 159 43 106 chr5 81380041 81380438 -118249712 - MLT1D LTR MaLR -6 499 128 1684 149 0 8 chr5 81380450 81380705 -118249445 - AluSx SINE Alu -4 308 56 474 95 0 0 chr5 81380707 81380770 -118249380 - MER66A LTR ERV1 -129 349 287 272 185 31 154 chr5 81380757 81380919 -118249231 - MLT1D LTR MaLR -477 149 8 * 906 129 8 0 chr5 81381093 81381225 -118248925 - AluSq/x SINE Alu -180 133 1 1314 157 37 0 chr5 81381231 81381447 -118248703 - AluJb SINE Alu -8 304 81 711 283 174 16 chr5 81381783 81382094 -118248056 - LTR16A LTR ERVL -90 360 1 357 244 42 124 chr5 81382723 81382940 -118247210 + L1ME1 LINE L1 5698 5896 -270 691 172 0 8 chr5 81382969 81383097 -118247053 + FLAM_C SINE Alu 1 127 -6 2005 103 0 8 chr5 81383214 81383476 -118246674 + AluSg SINE Alu 1 260 -50 420 91 0 0 chr5 81383476 81383531 -118246619 - Alu SINE Alu -256 56 2 24 0 0 0 chr5 81383802 81383826 -118246324 + AT_rich Low_complexity Low_complexity 1 24 0 1946 133 14 3 chr5 81383832 81384125 -118246025 + AluSx SINE Alu 6 301 -11 802 176 0 14 chr5 81384162 81384304 -118245846 + FLAM_C SINE Alu 4 143 0 2204 90 35 0 chr5 81384358 81384648 -118245502 + AluSp SINE Alu 1 300 -13 23 33 0 0 chr5 81384731 81384761 -118245389 + AT_rich Low_complexity Low_complexity 1 30 0 875 189 24 12 chr5 81384805 81384969 -118245181 - AluJo/FRAM SINE Alu 0 302 137 1449 133 0 18 chr5 81384972 81385141 -118245009 - AluSg/x SINE Alu -10 302 136 2593 59 0 0 chr5 81385141 81385446 -118244704 - AluY SINE Alu -6 305 1 1449 133 0 18 chr5 81385446 81385494 -118244656 - AluSg/x SINE Alu -176 136 89 773 170 14 7 chr5 81385501 81385642 -118244508 - FLAM_C SINE Alu 0 143 2 216 0 0 0 chr5 81385643 81385667 -118244483 + (TC)n Simple_repeat Simple_repeat 2 25 0 2259 95 3 0 chr5 81386026 81386311 -118243839 + AluSg SINE Alu 1 286 -24 1944 104 4 0 chr5 81386591 81386850 -118243300 + AluSx SINE Alu 44 303 -9 274 100 0 60 chr5 81386850 81386900 -118243250 + FAM SINE Alu 126 169 -10 1132 132 216 24 chr5 81386958 81387171 -118242979 - AluJb SINE Alu -58 254 1 863 162 56 28 chr5 81387243 81387422 -118242728 - LTR48B LTR ERV1 -3 641 458 723 130 0 0 chr5 81387435 81387543 -118242607 - FLAM_C SINE Alu -25 118 11 2008 113 48 20 chr5 81387623 81387916 -118242234 - AluSx SINE Alu -11 301 1 766 154 0 8 chr5 81387955 81388078 -118242072 - FLAM_C SINE Alu -11 122 1 447 185 348 45 chr5 81388131 81388227 -118241923 - LTR48 LTR ERV1 -354 268 202 2219 104 0 52 chr5 81388227 81388554 -118241596 - AluSq SINE Alu -3 310 1 2526 82 0 0 chr5 81388554 81388860 -118241290 - AluSx SINE Alu -6 306 1 447 185 348 45 chr5 81388860 81389013 -118241137 - LTR48 LTR ERV1 -419 203 9 588 297 41 12 chr5 81389082 81389367 -118240783 - L1ME3 LINE L1 -315 5806 5527 2053 108 0 0 chr5 81389444 81389704 -118240446 - AluSx SINE Alu -52 260 1 180 0 0 0 chr5 81389861 81389881 -118240269 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2012 136 4 4 chr5 81389885 81390165 -118239985 - AluSx SINE Alu -24 288 9 2053 83 0 11 chr5 81390165 81390441 -118239709 - AluY SINE Alu -38 273 1 1988 116 13 13 chr5 81391284 81391724 -118238426 - AluSg SINE Alu 0 440 1 935 217 49 79 chr5 81391767 81392071 -118238079 + MER97a DNA MER1_type? 363 657 -237 1902 114 54 44 chr5 81392459 81392756 -118237394 - AluSg SINE Alu -3 307 8 784 156 21 21 chr5 81392766 81392907 -118237243 - FLAM_C SINE Alu -1 142 2 724 170 0 37 chr5 81392977 81393112 -118237038 + FRAM SINE Alu 41 170 -6 418 256 75 15 chr5 81393115 81393248 -118236902 + MER97a DNA MER1_type? 782 894 0 1958 74 0 8 chr5 81393409 81393653 -118236497 + AluSg SINE Alu 1 242 -68 241 307 0 0 chr5 81394200 81394275 -118235875 + MIR SINE MIR 90 164 -98 485 243 101 14 chr5 81394280 81394428 -118235722 - MIR SINE MIR -12 250 90 2221 111 36 27 chr5 81394547 81394881 -118235269 - MER1B DNA MER1_type 0 337 1 867 174 39 11 chr5 81394889 81395067 -118235083 - MER5A DNA MER1_type 0 189 7 2360 54 0 44 chr5 81395496 81395676 -118234474 - AluY SINE Alu 0 311 149 2605 52 3 0 chr5 81395676 81395981 -118234169 - AluY SINE Alu -5 306 1 2360 54 0 44 chr5 81395981 81396123 -118234027 - AluY SINE Alu -162 149 2 1645 117 121 11 chr5 81396472 81396737 -118233413 + AluSg1 SINE Alu 1 294 -15 228 86 0 0 chr5 81396754 81396789 -118233361 + (T)n Simple_repeat Simple_repeat 1 35 0 2254 86 3 42 chr5 81396822 81397135 -118233015 + AluSx SINE Alu 1 301 -11 1030 121 72 24 chr5 81397771 81397937 -118232213 - AluSg/x SINE Alu -7 305 132 27 0 0 0 chr5 81397937 81397964 -118232186 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 81397998 81398026 -118232124 + AT_rich Low_complexity Low_complexity 1 28 0 2617 49 0 10 chr5 81398039 81398346 -118231804 + AluY SINE Alu 1 304 -7 261 0 0 0 chr5 81399321 81399350 -118230800 + (TG)n Simple_repeat Simple_repeat 2 30 0 858 165 0 0 chr5 81399636 81399769 -118230381 + AluJo SINE Alu 1 133 -179 1158 157 51 25 chr5 81399778 81400014 -118230136 - AluJo SINE Alu -8 304 63 581 134 226 110 chr5 81400016 81400180 -118229970 + AluJo SINE Alu 111 293 -19 376 311 0 0 chr5 81400180 81400286 -118229864 + MIR SINE MIR 155 260 -2 21 0 0 0 chr5 81400914 81400935 -118229215 + AT_rich Low_complexity Low_complexity 1 21 0 2310 107 3 0 chr5 81400938 81401238 -118228912 + AluSx SINE Alu 1 301 -11 457 248 44 0 chr5 81401238 81401351 -118228799 - AluJo/FLAM SINE Alu -184 118 1 25 0 0 0 chr5 81401391 81401416 -118228734 + AT_rich Low_complexity Low_complexity 1 25 0 1918 105 0 120 chr5 81401574 81401780 -118228370 - AluSx SINE Alu 0 302 152 2851 19 0 0 chr5 81401780 81402091 -118228059 - AluYa5 SINE Alu 0 311 1 1918 105 0 120 chr5 81402091 81402226 -118227924 - AluSx SINE Alu -150 152 2 320 356 20 0 chr5 81402252 81402398 -118227752 - MIR3 SINE MIR -16 192 44 198 179 30 60 chr5 81402531 81402598 -118227552 + MIR SINE MIR 75 139 -123 2212 133 0 9 chr5 81402964 81403280 -118226870 - AluSq SINE Alu 0 313 1 2224 115 3 7 chr5 81403285 81403590 -118226560 - AluSg SINE Alu -6 304 1 412 107 0 0 chr5 81403595 81403651 -118226499 - Alu SINE Alu -21 288 233 2115 114 0 29 chr5 81404159 81404465 -118225685 - AluSx SINE Alu -15 297 1 1324 159 22 22 chr5 81404493 81404725 -118225425 - AluSx SINE Alu -22 290 59 216 205 12 36 chr5 81404989 81405072 -118225078 + (TTTA)n Simple_repeat Simple_repeat 3 83 0 180 0 0 0 chr5 81405212 81405232 -118224918 + (T)n Simple_repeat Simple_repeat 1 20 0 24 0 0 0 chr5 81405509 81405533 -118224617 + AT_rich Low_complexity Low_complexity 1 24 0 2185 114 0 7 chr5 81406079 81406368 -118223782 - AluSx SINE Alu -25 287 1 590 195 115 0 chr5 81406512 81406625 -118223525 - FLAM_C SINE Alu -6 127 2 1466 156 19 0 chr5 81408212 81408468 -118221682 - L1PA14 LINE L1 -2 6159 5899 1068 24 0 0 chr5 81408468 81408595 -118221555 + (TTCCC)n Simple_repeat Simple_repeat 4 130 0 1384 277 130 13 chr5 81408710 81409298 -118220852 + HERV16 LTR ERVL 2253 2919 -2077 2157 113 0 3 chr5 81409671 81409986 -118220164 + AluSp SINE Alu 6 313 0 1560 169 17 24 chr5 81410126 81410416 -118219734 + AluJo SINE Alu 22 309 -3 387 319 214 30 chr5 81410592 81410795 -118219355 + LTR16A LTR ERVL 1 165 -285 2431 92 3 0 chr5 81410795 81411101 -118219049 - AluSp SINE Alu -6 307 1 387 319 214 30 chr5 81411101 81411212 -118218938 + LTR16A LTR ERVL 165 254 -196 2252 111 3 0 chr5 81411212 81411510 -118218640 - AluSx SINE Alu -12 300 2 387 319 214 30 chr5 81411510 81411567 -118218583 + LTR16A LTR ERVL 254 442 -8 21 0 0 0 chr5 81412247 81412268 -118217882 + AT_rich Low_complexity Low_complexity 1 21 0 2077 123 3 13 chr5 81412308 81412610 -118217540 - AluSx SINE Alu -13 299 1 1618 172 49 18 chr5 81412612 81412776 -118217374 - AluJo SINE Alu -18 294 116 2346 93 10 0 chr5 81412776 81413086 -118217064 - AluSp SINE Alu 0 313 1 1618 172 49 18 chr5 81413086 81413206 -118216944 - AluJo SINE Alu -196 116 1 2344 81 7 7 chr5 81413226 81413521 -118216629 - AluSq SINE Alu -16 297 3 25 0 0 0 chr5 81413523 81413548 -118216602 + AT_rich Low_complexity Low_complexity 1 25 0 2269 98 17 0 chr5 81413749 81414046 -118216104 - AluSx SINE Alu -10 302 1 2272 103 0 0 chr5 81414193 81414485 -118215665 + AluSx SINE Alu 1 292 -20 38 22 0 0 chr5 81415519 81415564 -118214586 + GC_rich Low_complexity Low_complexity 1 45 0 26 0 0 0 chr5 81415832 81415858 -118214292 + GC_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr5 81416091 81416114 -118214036 + GC_rich Low_complexity Low_complexity 1 23 0 2191 69 3 57 chr5 81418137 81418454 -118211696 - AluSc SINE Alu -9 300 1 2554 54 3 16 chr5 81419016 81419330 -118210820 + AluY SINE Alu 1 310 -1 2420 92 0 0 chr5 81419502 81419805 -118210345 - AluSg SINE Alu -7 303 1 1908 137 7 0 chr5 81419821 81420099 -118210051 - AluSx SINE Alu -31 281 2 261 95 0 0 chr5 81420209 81420251 -118209899 + MER117 DNA MER1_type 109 150 -47 437 127 0 0 chr5 81421134 81421205 -118208945 - Tigger1 DNA MER2_type -60 2358 2288 281 344 23 16 chr5 81422016 81422144 -118208006 - MIR SINE MIR -63 145 17 953 185 0 0 chr5 81422275 81422432 -118207718 - AluSg/x SINE Alu -12 300 144 2362 103 7 0 chr5 81423482 81423792 -118206358 - AluSx SINE Alu 0 312 1 22 0 0 0 chr5 81424530 81424552 -118205598 + AT_rich Low_complexity Low_complexity 1 22 0 2089 145 3 0 chr5 81425120 81425416 -118204734 - AluSx SINE Alu -15 297 1 194 254 30 15 chr5 81425848 81425915 -118204235 - MIR SINE MIR -5 257 190 232 295 51 13 chr5 81626012 81626090 -118004060 - L2 LINE L2 -187 3085 3005 282 56 0 0 chr5 81626645 81626681 -118003469 + (TG)n Simple_repeat Simple_repeat 2 37 0 24 0 0 0 chr5 81627233 81627257 -118002893 + AT_rich Low_complexity Low_complexity 1 24 0 830 232 18 0 chr5 81628447 81628615 -118001535 + AluJb SINE Alu 140 310 -2 216 0 0 0 chr5 81628670 81628694 -118001456 + (TTA)n Simple_repeat Simple_repeat 2 25 0 475 232 211 0 chr5 81629077 81629219 -118000931 - MIR SINE MIR 0 262 91 727 193 210 6 chr5 81629491 81629672 -118000478 + MER20 DNA MER1_type 2 219 0 391 323 172 5 chr5 81629759 81629951 -118000199 - MIR SINE MIR -18 244 21 1492 168 61 32 chr5 81630121 81630401 -117999749 + AluJo SINE Alu 1 288 -24 323 241 63 38 chr5 81631151 81631309 -117998841 - L1ME LINE L1 -307 5814 5653 355 311 101 58 chr5 81631565 81631842 -117998308 + L2 LINE L2 2889 3177 -136 437 48 16 0 chr5 81631854 81631916 -117998234 - L1PB1 LINE L1 -2 6149 6087 603 172 23 8 chr5 81631921 81632049 -117998101 - L1MC4 LINE L1 0 8042 7913 362 147 15 0 chr5 81632050 81632118 -117998032 + CT-rich Low_complexity Low_complexity 1 69 0 370 91 0 78 chr5 81632118 81632195 -117997955 - Tigger3b DNA MER2_type -203 1028 958 5160 131 40 17 chr5 81632196 81633150 -117997000 - Tigger3b DNA MER2_type -242 989 14 2380 85 10 7 chr5 81633275 81633582 -117996568 - AluY SINE Alu -3 308 1 1842 158 34 3 chr5 81633615 81633913 -117996237 + AluJb SINE Alu 1 307 -5 475 323 35 45 chr5 81634059 81634369 -117995781 - L1M4 LINE L1 -3147 2999 2693 1787 173 0 0 chr5 81634692 81635002 -117995148 - AluJb SINE Alu 0 310 1 352 293 82 66 chr5 81635082 81635209 -117994941 - HAL1b LINE L1 -512 836 713 1034 203 39 103 chr5 81635209 81635599 -117994551 - MLT1A1 LTR MaLR 0 365 1 352 293 82 66 chr5 81635599 81636079 -117994071 - HAL1b LINE L1 -635 713 219 25 65 0 0 chr5 81636217 81636263 -117993887 + AT_rich Low_complexity Low_complexity 1 46 0 322 268 0 54 chr5 81637237 81637349 -117992801 + L2 LINE L2 3158 3263 -50 1529 177 34 11 chr5 81637599 81637865 -117992285 + AluJo SINE Alu 23 294 -18 282 95 0 0 chr5 81637898 81637940 -117992210 + (GA)n Simple_repeat Simple_repeat 1 42 0 4941 144 19 62 chr5 81638079 81638979 -117991171 - L1MA4A LINE L1 -1 7004 6191 2131 143 0 3 chr5 81638979 81639287 -117990863 - AluSx SINE Alu -5 307 1 4941 144 19 62 chr5 81639287 81639799 -117990351 - L1MA4A LINE L1 -814 6191 5659 7536 175 36 12 chr5 81639806 81641189 -117988961 - L1MA4A LINE L1 -2074 4774 3427 2338 98 0 0 chr5 81641189 81641486 -117988664 + AluSg SINE Alu 1 297 -13 7536 175 36 12 chr5 81641486 81642964 -117987186 - L1MA4A LINE L1 -3421 3427 1840 1977 163 0 3 chr5 81642964 81643271 -117986879 - AluSx SINE Alu -6 306 1 395 65 16 0 chr5 81643272 81643334 -117986816 - L1M1 LINE L1 -851 5452 5390 7229 216 97 7 chr5 81643434 81643564 -117986586 - L1MA4A LINE L1 -4882 1967 1850 2056 144 3 3 chr5 81643564 81643870 -117986280 - AluSx SINE Alu -6 306 1 7229 216 97 7 chr5 81643870 81645543 -117984607 - L1MA4A LINE L1 -4999 1850 2 935 98 0 15 chr5 81645727 81645860 -117984290 + FLAM_C SINE Alu 1 131 -12 605 96 34 22 chr5 81645967 81646145 -117984005 + (TA)n Simple_repeat Simple_repeat 1 180 0 307 66 67 0 chr5 81646179 81646299 -117983851 + (TA)n Simple_repeat Simple_repeat 1 128 0 300 250 54 54 chr5 81646299 81646391 -117983759 + L1MC4 LINE L1 6612 6703 -1339 932 129 7 27 chr5 81647228 81647375 -117982775 - AluSg/x SINE Alu -6 304 161 2256 112 0 3 chr5 81648098 81648411 -117981739 + AluSx SINE Alu 1 312 0 203 311 122 0 chr5 81648876 81648950 -117981200 + L2 LINE L2 3183 3265 -7 21 0 0 0 chr5 81649441 81649462 -117980688 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 81651361 81651399 -117978751 + AT_rich Low_complexity Low_complexity 1 38 0 212 122 0 49 chr5 81652034 81652075 -117978075 + (CAAAAA)n Simple_repeat Simple_repeat 6 44 0 262 30 0 0 chr5 81653373 81653406 -117976744 + U2 snRNA snRNA 4 36 -152 1616 118 13 13 chr5 81653714 81653951 -117976199 - AluSq SINE Alu -9 304 68 244 255 0 0 chr5 81654312 81654359 -117975791 - L2 LINE L2 -10 3262 3216 2503 67 0 0 chr5 81654977 81655276 -117974874 - AluY SINE Alu -12 299 1 195 42 0 0 chr5 81655393 81655417 -117974733 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2219 121 3 0 chr5 81655427 81655733 -117974417 - AluSq SINE Alu -6 307 1 2900 147 23 48 chr5 81655754 81656372 -117973778 - L1MB4 LINE L1 0 6180 5579 25 0 0 0 chr5 81656725 81656750 -117973400 + AT_rich Low_complexity Low_complexity 1 25 0 413 285 205 29 chr5 81656805 81657152 -117972998 - L2 LINE L2 -740 2574 2167 436 304 120 0 chr5 81658463 81658621 -117971529 - MIR SINE MIR -77 185 9 367 288 22 108 chr5 81658854 81659177 -117970973 - L1ME4a LINE L1 -76 6045 5751 192 322 34 0 chr5 81659403 81659462 -117970688 + L2 LINE L2 3209 3269 -3 2223 112 0 0 chr5 81659503 81659824 -117970326 - AluSx SINE Alu 0 321 1 423 344 119 35 chr5 81660104 81660389 -117969761 - L2 LINE L2 -9 3263 2955 257 331 24 47 chr5 81660488 81660615 -117969535 - L2 LINE L2 -534 2780 2657 2136 129 10 0 chr5 81660622 81660917 -117969233 + AluSx SINE Alu 1 298 -14 898 153 0 0 chr5 81660927 81661051 -117969099 + FLAM_C SINE Alu 1 124 -19 2369 80 7 0 chr5 81661923 81662222 -117967928 + AluSq SINE Alu 1 301 -12 273 309 252 4 chr5 81662521 81662751 -117967399 - L2 LINE L2 -961 2353 2067 2324 90 10 7 chr5 81662858 81663198 -117966952 - AluSx SINE Alu 0 341 1 1834 148 31 14 chr5 81663807 81664097 -117966053 + AluJb SINE Alu 1 295 -17 2343 124 40 60 chr5 81664737 81664789 -117965361 + MER65A LTR ERV1 3 55 -390 1702 168 20 24 chr5 81664789 81665087 -117965063 + AluJo SINE Alu 1 297 -15 2205 129 3 0 chr5 81665089 81665400 -117964750 + AluSx SINE Alu 1 312 0 2343 124 40 60 chr5 81665400 81665743 -117964407 + MER65A LTR ERV1 56 393 -52 207 0 0 0 chr5 81665743 81665766 -117964384 + (TA)n Simple_repeat Simple_repeat 1 23 0 2343 124 40 60 chr5 81665766 81665818 -117964332 + MER65A LTR ERV1 393 445 0 4509 208 88 101 chr5 81665889 81666053 -117964097 + MER65A-int LTR ERV1 70 235 -4636 1894 143 31 0 chr5 81666053 81666347 -117963803 + AluJb SINE Alu 1 303 -9 4509 208 88 101 chr5 81666347 81666358 -117963792 + MER65A-int LTR ERV1 235 245 -4626 2147 128 0 3 chr5 81666358 81666656 -117963494 + AluSx SINE Alu 1 297 -15 4509 208 88 101 chr5 81666656 81667374 -117962776 + MER65A-int LTR ERV1 245 970 -3901 1769 164 9 50 chr5 81667374 81667692 -117962458 + AluJo SINE Alu 1 305 -7 4509 208 88 101 chr5 81667692 81667865 -117962285 + MER65A-int LTR ERV1 970 1144 -3727 2345 114 0 0 chr5 81667865 81668172 -117961978 + AluSg SINE Alu 1 307 -3 4509 208 88 101 chr5 81668172 81668320 -117961830 + MER65A-int LTR ERV1 1144 1292 -3579 592 161 0 67 chr5 81668320 81668469 -117961681 + AluSg/x SINE Alu 153 291 -21 4509 208 88 101 chr5 81668469 81668745 -117961405 + MER65A-int LTR ERV1 1292 1570 -3301 1776 123 16 29 chr5 81668745 81669055 -117961095 - AluSp SINE Alu -6 307 2 4509 208 88 101 chr5 81669055 81669251 -117960899 + MER65A-int LTR ERV1 1570 1767 -3104 2240 109 3 7 chr5 81669251 81669554 -117960596 + AluSx SINE Alu 3 304 -8 4509 208 88 101 chr5 81669554 81670190 -117959960 + MER65A-int LTR ERV1 1767 2409 -2462 2338 94 0 3 chr5 81670190 81670498 -117959652 + AluSg SINE Alu 1 307 -3 4509 208 88 101 chr5 81670498 81670778 -117959372 + MER65A-int LTR ERV1 2409 2691 -2180 1875 156 0 7 chr5 81670778 81671060 -117959090 + AluJo SINE Alu 9 288 -24 2225 128 0 3 chr5 81671063 81671376 -117958774 + AluSx SINE Alu 1 312 0 4509 208 88 101 chr5 81671376 81671449 -117958701 + MER65A-int LTR ERV1 2422 2494 -2377 284 25 50 0 chr5 81671449 81671489 -117958661 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 525 194 83 0 chr5 81671490 81671598 -117958552 - FLAM_C SINE Alu -26 117 1 638 153 81 103 chr5 81671599 81671834 -117958316 + MER65A-int LTR ERV1 2364 2487 -2636 2357 102 0 0 chr5 81671834 81672139 -117958011 + AluSc SINE Alu 1 305 -4 638 153 81 103 chr5 81672139 81672178 -117957972 + MER65A-int LTR ERV1 2487 2525 -2598 2453 76 0 3 chr5 81672180 81672481 -117957669 - AluY SINE Alu -11 300 1 1249 195 0 9 chr5 81672490 81672716 -117957434 - AluJb SINE Alu -6 306 83 585 197 35 64 chr5 81673062 81673214 -117956936 + MER65A-int LTR ERV1 3536 3683 -2915 1774 179 7 0 chr5 81673214 81673518 -117956632 - AluJb SINE Alu 0 306 1 585 197 35 64 chr5 81673518 81673567 -117956583 + MER65A-int LTR ERV1 3683 3732 -2866 1032 151 0 0 chr5 81673609 81673755 -117956395 + AluSg/x SINE Alu 143 288 -22 1164 263 32 6 chr5 81673766 81674104 -117956046 + MER65A-int LTR ERV1 4523 4869 -2 2255 139 24 59 chr5 81674174 81674635 -117955515 + MER65A LTR ERV1 1 445 0 2150 123 7 0 chr5 81676232 81676540 -117953610 + AluSx SINE Alu 1 310 -2 2277 74 14 7 chr5 81677086 81677383 -117952767 - AluSp SINE Alu -14 299 1 2005 157 0 0 chr5 81677948 81678326 -117951824 - AluSx SINE Alu 0 383 6 1796 160 28 3 chr5 81678337 81678619 -117951531 - AluJb SINE Alu -23 289 1 247 299 28 56 chr5 81678632 81678739 -117951411 + MIR3 SINE MIR 89 192 -16 2058 228 85 11 chr5 81678867 81679394 -117950756 + L1ME1 LINE L1 5596 6161 -5 2423 63 10 13 chr5 81679534 81679837 -117950313 - AluY SINE Alu -9 302 1 493 194 40 40 chr5 81680242 81680366 -117949784 - MIR3 SINE MIR -3 205 82 2253 104 0 3 chr5 81681693 81681990 -117948160 + AluSg SINE Alu 1 296 -14 1796 152 76 0 chr5 81682278 81682568 -117947582 - AluJo SINE Alu 0 312 1 1865 143 7 20 chr5 81682600 81682735 -117947415 + AluSx SINE Alu 4 139 -173 2189 120 3 0 chr5 81682735 81683035 -117947115 + AluSq SINE Alu 1 301 -12 1865 143 7 20 chr5 81683035 81683200 -117946950 + AluSx SINE Alu 139 300 -12 255 157 0 0 chr5 81683200 81683251 -117946899 + (TA)n Simple_repeat Simple_repeat 2 52 0 35328 64 7 8 chr5 81683374 81688732 -117941418 + L1PA6 LINE L1 802 6152 -2 825 103 0 17 chr5 81688742 81688859 -117941291 + AluSp/q SINE Alu 194 308 -5 2511 45 0 0 chr5 81688865 81689157 -117940993 + AluY SINE Alu 1 292 -19 317 259 78 48 chr5 81689215 81689381 -117940769 + L2 LINE L2 1784 1954 -1360 931 290 121 61 chr5 81689462 81690431 -117939719 - HAL1 LINE L1 -1206 1301 275 808 117 31 31 chr5 81690635 81690763 -117939387 - FLAM_C SINE Alu -5 138 11 591 184 219 70 chr5 81691103 81691161 -117938989 - MIR SINE MIR 0 262 214 2441 78 3 0 chr5 81691161 81691469 -117938681 - AluSg SINE Alu -1 309 1 591 184 219 70 chr5 81691469 81691638 -117938512 - MIR SINE MIR -48 214 1 341 295 14 78 chr5 81692014 81692109 -117938041 - L1ME3A LINE L1 -5 6165 6065 2101 90 4 4 chr5 81692109 81692420 -117937730 + AluSg SINE Alu 1 311 0 341 295 14 78 chr5 81692420 81692540 -117937610 - L1ME3A LINE L1 -105 6065 5963 1645 243 113 35 chr5 81692601 81693230 -117936920 - L1ME3A LINE L1 -202 5960 5283 2164 117 0 0 chr5 81693274 81693576 -117936574 - AluSx SINE Alu 0 302 1 31 44 0 0 chr5 81693583 81693628 -117936522 + AT_rich Low_complexity Low_complexity 1 45 0 486 282 24 28 chr5 81693646 81693859 -117936291 - L1ME3A LINE L1 -1873 4273 4062 1651 183 41 66 chr5 81694176 81694569 -117935581 - MLT1B LTR MaLR 0 390 8 689 306 160 39 chr5 81694585 81695311 -117934839 - L2 LINE L2 -337 2977 2164 2331 101 0 3 chr5 81696076 81696382 -117933768 - AluSx SINE Alu -7 305 1 1017 161 6 6 chr5 81701234 81701395 -117928755 + AluJo SINE Alu 1 161 -151 624 190 151 11 chr5 81703400 81703579 -117926571 + Charlie5 DNA MER1_type 1 204 -2408 947 209 47 24 chr5 81703580 81703833 -117926317 + Charlie5 DNA MER1_type 2359 2617 0 1661 109 120 11 chr5 81703869 81704136 -117926014 + AluSx SINE Alu 1 296 -16 1141 133 6 17 chr5 81704186 81704367 -117925783 - AluJb SINE Alu -117 195 17 2079 127 6 16 chr5 81704600 81704916 -117925234 + AluSq SINE Alu 1 313 0 384 22 0 0 chr5 81705673 81705718 -117924432 + (TC)n Simple_repeat Simple_repeat 2 46 0 189 0 0 0 chr5 81705717 81705738 -117924412 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 338 206 148 32 chr5 81705991 81706146 -117924004 - Charlie5 DNA MER1_type -105 2507 2335 1833 130 10 43 chr5 81706166 81706465 -117923685 + AluSx SINE Alu 1 289 -23 1079 145 88 10 chr5 81706587 81706780 -117923370 + AluJo SINE Alu 92 299 -13 737 195 8 0 chr5 81707428 81707551 -117922599 - FLAM_A SINE Alu -8 125 2 2311 100 23 0 chr5 81707557 81707856 -117922294 - AluSx SINE Alu -6 306 1 21 36 0 0 chr5 81708887 81708915 -117921235 + AT_rich Low_complexity Low_complexity 1 28 0 186 160 0 0 chr5 81709854 81709904 -117920246 + (TGG)n Simple_repeat Simple_repeat 2 51 0 2348 84 0 0 chr5 81710361 81710648 -117919502 + AluSx SINE Alu 1 287 -25 1741 162 32 0 chr5 81711079 81711363 -117918787 - AluJb SINE Alu -8 304 12 2262 113 0 0 chr5 81712403 81712705 -117917445 + AluSx SINE Alu 1 302 -10 948 134 0 15 chr5 81713235 81713369 -117916781 + FLAM_C SINE Alu 2 133 0 830 166 108 0 chr5 81713515 81713654 -117916496 - AluJb SINE Alu -151 161 8 2071 125 16 0 chr5 81714159 81714462 -117915688 + AluSx SINE Alu 1 308 -4 4644 193 76 61 chr5 81715173 81716483 -117913667 + L1MC1 LINE L1 3952 5240 -1093 2099 119 24 0 chr5 81716483 81716777 -117913373 + AluSx SINE Alu 1 301 -11 4644 193 76 61 chr5 81716777 81716916 -117913234 + L1MC1 LINE L1 5240 5375 -958 564 241 71 0 chr5 81716916 81717028 -117913122 + FLAM_A SINE Alu 1 120 -13 4644 193 76 61 chr5 81717028 81717849 -117912301 + L1MC1 LINE L1 5375 6265 -68 335 181 169 0 chr5 81717849 81717932 -117912218 + L1MC1 LINE L1 6213 6309 -24 768 189 0 8 chr5 81718481 81718608 -117911542 - FLAM_C SINE Alu -17 126 1 2119 110 14 10 chr5 81719058 81719350 -117910800 - AluSx SINE Alu -19 293 1 222 398 8 0 chr5 81719551 81719669 -117910481 + MIR SINE MIR 30 148 -114 725 242 164 15 chr5 81719669 81719938 -117910212 - MER46C DNA MER2_type 0 338 30 890 117 55 0 chr5 81721157 81721285 -117908865 + FLAM_C SINE Alu 1 135 -8 250 334 96 73 chr5 81721365 81721805 -117908345 + L2 LINE L2 2288 2737 -577 480 299 194 31 chr5 81721901 81722189 -117907961 + L2 LINE L2 2900 3234 -38 2458 64 17 3 chr5 81722417 81722715 -117907435 - AluSq SINE Alu -11 302 1 193 313 145 24 chr5 81723875 81723958 -117906192 + MIR SINE MIR 21 113 -95 316 280 40 60 chr5 81774027 81774177 -117855973 + L1M3c LINE L1 1193 1339 -4802 209 229 16 0 chr5 81777693 81777754 -117852396 + (TA)n Simple_repeat Simple_repeat 1 62 0 189 170 11 53 chr5 81778668 81778762 -117851388 + GA-rich Low_complexity Low_complexity 3 92 0 222 163 0 41 chr5 81781907 81781956 -117848194 + A-rich Low_complexity Low_complexity 4 50 0 208 250 0 0 chr5 81784067 81784123 -117846027 + A-rich Low_complexity Low_complexity 1 56 0 212 219 35 26 chr5 81795691 81795805 -117834345 + (TTGTG)n Simple_repeat Simple_repeat 1 115 0 1880 125 3 7 chr5 81795930 81796235 -117833915 - AluY SINE Alu -7 304 1 732 221 62 94 chr5 81796235 81796433 -117833717 - LTR29 LTR ERV1 -173 471 268 2097 97 0 3 chr5 81796433 81796722 -117833428 + AluSx SINE Alu 3 290 -22 732 221 62 94 chr5 81796722 81796941 -117833209 - LTR29 LTR ERV1 -376 268 77 2165 108 0 13 chr5 81796941 81797255 -117832895 - AluSx SINE Alu -2 310 1 732 221 62 94 chr5 81797255 81797327 -117832823 - LTR29 LTR ERV1 -567 77 4 1002 111 7 0 chr5 81797543 81797687 -117832463 - LTR23 LTR ERV1 0 437 293 783 104 0 79 chr5 81797688 81797852 -117832298 - AluSp/q SINE Alu -1 312 162 4055 113 7 73 chr5 81798457 81798545 -117831605 + LTR8 LTR ERV1 62 154 -537 1508 163 0 0 chr5 81798545 81798784 -117831366 - AluSx SINE Alu -12 300 62 4055 113 7 73 chr5 81798784 81799369 -117830781 + LTR8 LTR ERV1 154 691 0 1251 158 21 0 chr5 81799374 81799564 -117830586 + HUERS-P1 LTR ERV1 7 200 -6063 1091 123 0 0 chr5 81799564 81799710 -117830440 + LTR8 LTR ERV1 546 691 0 2148 202 54 69 chr5 81799710 81800381 -117829769 + HUERS-P1 LTR ERV1 1 797 -5466 438 145 0 0 chr5 81800371 81800433 -117829717 + HUERS-P1 LTR ERV1 1131 1192 -5071 * 4437 146 78 59 chr5 81800431 81800792 -117829358 + HUERS-P1 LTR ERV1 5329 5681 -582 504 0 0 0 chr5 81800792 81800848 -117829302 + (TTTTA)n Simple_repeat Simple_repeat 5 60 0 1962 119 0 0 chr5 81800848 81801125 -117829025 - AluSc SINE Alu -32 277 1 4437 146 78 59 chr5 81801125 81801679 -117828471 + HUERS-P1 LTR ERV1 5680 6263 0 3285 115 18 87 chr5 81801679 81802252 -117827898 + LTR8 LTR ERV1 1 531 -160 2043 114 0 3 chr5 81802252 81802566 -117827584 + AluSg SINE Alu 1 310 0 3285 115 18 87 chr5 81802566 81802603 -117827547 + LTR8 LTR ERV1 531 569 -122 1484 178 41 95 chr5 81802724 81802907 -117827243 - LTR49-int LTR ERV1 -3023 1921 1730 1223 115 0 149 chr5 81802907 81803255 -117826895 + AluSx SINE Alu 1 296 -16 1484 178 41 95 chr5 81803255 81803652 -117826498 - LTR49-int LTR ERV1 -3214 1730 1511 2250 82 3 10 chr5 81803652 81803957 -117826193 - AluSg SINE Alu -7 303 1 1484 178 41 95 chr5 81803957 81804048 -117826102 - LTR49-int LTR ERV1 -3433 1511 1417 2173 88 3 0 chr5 81804061 81804358 -117825792 - AluSp SINE Alu -15 298 1 376 161 0 0 chr5 81804418 81804480 -117825670 - MER34C LTR ERV1 -360 225 164 4601 194 34 68 chr5 81804520 81805409 -117824741 - LTR49-int LTR ERV1 -2686 2194 1086 2104 122 0 0 chr5 81805409 81805704 -117824446 - AluSx SINE Alu -17 295 1 4601 194 34 68 chr5 81805704 81806029 -117824121 - LTR49-int LTR ERV1 -3794 1086 751 2144 97 10 0 chr5 81806033 81806323 -117823827 + AluSg SINE Alu 1 293 -17 2709 113 43 5 chr5 81807201 81807618 -117822532 - LTR23 LTR ERV1 0 437 5 3345 118 8 137 chr5 81807831 81807987 -117822163 + LTR8 LTR ERV1 1 175 -516 1508 163 0 0 chr5 81807987 81808226 -117821924 - AluSx SINE Alu -12 300 62 3345 118 8 137 chr5 81808226 81808801 -117821349 + LTR8 LTR ERV1 175 638 -53 799 167 17 72 chr5 81808919 81809099 -117821051 + HUERS-P1 LTR ERV1 7 176 -6087 340 124 15 175 chr5 81809220 81809357 -117820793 + AluSp/q SINE Alu 185 299 -4 2191 78 3 10 chr5 81809510 81809805 -117820345 + AluSg SINE Alu 11 303 -7 1354 184 46 83 chr5 81809813 81810202 -117819948 + MER110-int LTR ERV1 1508 1910 -2970 2094 116 0 17 chr5 81810202 81810503 -117819647 - AluSx SINE Alu -16 296 1 1354 184 46 83 chr5 81810503 81811001 -117819149 + MER110-int LTR ERV1 1910 2938 -1942 21 0 0 0 chr5 81811113 81811134 -117819016 + AT_rich Low_complexity Low_complexity 1 21 0 791 171 0 0 chr5 81811134 81811257 -117818893 - FLAM_C SINE Alu -19 124 2 276 332 56 20 chr5 81811314 81811510 -117818640 + MER110-int LTR ERV1 2357 2559 -2088 1965 109 17 10 chr5 81811553 81811846 -117818304 + AluSg SINE Alu 1 295 -15 1859 118 33 0 chr5 81811852 81812152 -117817998 + AluSg1 SINE Alu 1 309 0 1762 134 17 45 chr5 81812154 81812247 -117817903 + MER49 LTR ERV1 1 95 -828 1997 75 68 4 chr5 81812247 81812525 -117817625 + AluY SINE Alu 1 296 -15 1762 134 17 45 chr5 81812525 81812723 -117817427 + MER49 LTR ERV1 95 284 -639 2114 109 3 0 chr5 81812778 81813071 -117817079 + AluSx SINE Alu 1 294 -18 1503 175 23 66 chr5 81813074 81813187 -117816963 + MER4D LTR ERV1 571 687 -216 2168 109 0 0 chr5 81813187 81813490 -117816660 - AluSc SINE Alu 0 309 7 1503 175 23 66 chr5 81813490 81813724 -117816426 + MER4D LTR ERV1 687 903 0 572 179 8 0 chr5 81813879 81813996 -117816154 + GA-rich Low_complexity Low_complexity 3 120 0 643 157 41 8 chr5 81814593 81814714 -117815436 + LTR23 LTR ERV1 4 128 -309 1274 99 11 0 chr5 81814714 81814896 -117815254 - AluSg/x SINE Alu -13 297 114 831 112 32 0 chr5 81814896 81815021 -117815129 + LTR23 LTR ERV1 119 247 -190 3860 80 8 12 chr5 81815428 81815930 -117814220 - LTR3b LTR ERVK 0 500 1 2240 103 0 0 chr5 81816047 81816348 -117813802 + AluSx SINE Alu 1 301 -11 645 48 12 0 chr5 81817305 81817389 -117812761 + HY3 scRNA scRNA 15 99 -2 838 147 0 23 chr5 81817900 81818029 -117812121 + FLAM_C SINE Alu 2 127 -6 21 36 0 0 chr5 81818029 81818057 -117812093 + AT_rich Low_complexity Low_complexity 1 28 0 2335 138 69 17 chr5 81818235 81818642 -117811508 + MSTA LTR MaLR 1 428 0 1278 192 21 89 chr5 81819039 81819488 -117810662 - MLT2B1 LTR ERVL -2 518 1 1334 123 0 0 chr5 81819914 81820101 -117810049 + AluSx SINE Alu 1 187 -125 4589 57 2 7 chr5 81820111 81820692 -117809458 - MER4E LTR ERV1 -188 578 1 1919 124 16 20 chr5 81820759 81821065 -117809085 - AluSx SINE Alu -7 305 1 981 123 45 13 chr5 81821386 81821541 -117808609 + LTR8 LTR ERV1 521 680 -11 275 235 0 0 chr5 81821817 81821868 -117808282 - L2 LINE L2 0 3313 3263 354 290 21 14 chr5 81822683 81822828 -117807322 + L1MC4a LINE L1 5455 5600 -566 293 221 93 12 chr5 81822871 81822957 -117807193 - MER112 DNA MER1_type -9 251 159 2064 125 0 0 chr5 81822960 81823264 -117806886 + AluSx SINE Alu 1 304 -8 840 161 15 0 chr5 81823271 81823401 -117806749 + FAM SINE Alu 12 143 -42 2105 92 37 0 chr5 81823471 81823766 -117806384 + AluSp SINE Alu 2 307 -6 511 278 135 79 chr5 81823871 81824263 -117805887 + L1MC4a LINE L1 5634 6047 -1761 2251 107 0 0 chr5 81824285 81824594 -117805556 - AluY SINE Alu -2 309 1 2111 129 3 0 chr5 81824738 81825047 -117805103 + AluSq SINE Alu 1 310 -3 1027 211 82 84 chr5 81825065 81825566 -117804584 + MLT1F LTR MaLR 21 540 -2 1991 109 16 0 chr5 81825709 81826012 -117804138 + AluSx SINE Alu 1 308 -4 298 254 36 45 chr5 81826031 81826141 -117804009 + MIR SINE MIR 154 262 0 397 212 0 110 chr5 81826154 81826183 -117803967 - MIR3 SINE MIR -28 180 149 2217 56 20 33 chr5 81826183 81826488 -117803662 + AluY SINE Alu 1 301 -10 397 212 0 110 chr5 81826488 81826576 -117803574 - MIR3 SINE MIR -59 149 76 389 263 158 26 chr5 81826633 81826822 -117803328 - MIR SINE MIR -11 251 40 1732 170 9 35 chr5 81826845 81827285 -117802865 - AluJo SINE Alu 0 432 1 437 301 68 12 chr5 81827707 81827870 -117802280 - MIR SINE MIR -71 191 20 575 271 46 55 chr5 81827890 81828186 -117801964 + L1MC4a LINE L1 5622 5919 -202 641 48 36 12 chr5 81828194 81828278 -117801872 + LTR54B LTR ERV1 1 86 -412 2330 72 0 13 chr5 81828298 81828602 -117801548 - AluSx SINE Alu -12 300 1 234 275 14 14 chr5 81828767 81828836 -117801314 + LTR58 LTR ERV1 350 418 -261 718 171 126 63 chr5 81829177 81829397 -117800753 + LTR54B LTR ERV1 213 454 -44 2235 87 14 0 chr5 81829397 81829685 -117800465 + AluSp SINE Alu 7 298 -15 718 171 126 63 chr5 81829685 81829733 -117800417 + LTR54B LTR ERV1 454 498 0 2311 87 0 0 chr5 81829942 81830230 -117799920 - AluSg SINE Alu -20 290 3 1647 189 3 33 chr5 81830257 81830558 -117799592 + AluJo SINE Alu 1 292 -20 673 183 247 34 chr5 81831058 81831230 -117798920 + MER66A LTR ERV1 29 163 -315 1807 112 8 4 chr5 81831230 81831481 -117798669 + AluSx SINE Alu 45 296 -16 673 183 247 34 chr5 81831481 81831543 -117798607 + MER66A LTR ERV1 163 313 -165 312 249 0 97 chr5 81831544 81831729 -117798421 + MER66B LTR ERV1 280 446 -40 279 0 0 0 chr5 81831766 81831797 -117798353 + (TG)n Simple_repeat Simple_repeat 2 32 0 1808 160 31 0 chr5 81831861 81832154 -117797996 - AluJb SINE Alu -10 302 1 2298 82 0 0 chr5 81832163 81832454 -117797696 - AluY SINE Alu -20 291 1 531 299 34 15 chr5 81832772 81833040 -117797110 - L1ME3A LINE L1 -219 5951 5679 2347 104 0 0 chr5 81833048 81833356 -117796794 - AluSx SINE Alu -4 308 1 249 247 11 43 chr5 81833358 81833451 -117796699 - L1ME3A LINE L1 -568 5553 5464 21 0 0 0 chr5 81833485 81833506 -117796644 + AT_rich Low_complexity Low_complexity 1 21 0 2323 61 17 3 chr5 81833970 81834264 -117795886 - AluSc SINE Alu -11 298 1 2602 51 0 6 chr5 81834275 81834588 -117795562 - AluY SINE Alu 0 311 1 483 126 84 21 chr5 81834985 81835080 -117795070 - MIR SINE MIR -73 189 89 1414 136 0 25 chr5 81835526 81835769 -117794381 + AluSx SINE Alu 1 237 -75 234 187 22 72 chr5 81835831 81835970 -117794180 + (CACAA)n Simple_repeat Simple_repeat 3 134 0 281 208 32 40 chr5 81836125 81836250 -117793900 + A-rich Low_complexity Low_complexity 4 127 0 260 233 16 39 chr5 81836301 81836430 -117793720 + A-rich Low_complexity Low_complexity 5 130 0 2280 14 0 25 chr5 81836565 81836849 -117793301 - AluY SINE Alu -34 277 1 2425 74 0 3 chr5 81837134 81837445 -117792705 + AluY SINE Alu 1 310 -1 282 120 3 0 chr5 81837451 81837501 -117792649 + MER39B LTR ERV1 496 588 -115 1841 149 0 14 chr5 81838232 81838520 -117791630 - AluJb SINE Alu -22 290 7 978 73 8 0 chr5 81838589 81838712 -117791438 + AluSg/x SINE Alu 174 297 -13 246 125 0 0 chr5 81839300 81839340 -117790810 + L1MC2 LINE L1 6289 6328 -16 2218 108 3 26 chr5 81839340 81839646 -117790504 + AluSx SINE Alu 1 299 -13 398 290 160 25 chr5 81839646 81839846 -117790304 - MIR SINE MIR -27 235 9 386 311 62 0 chr5 81839896 81840057 -117790093 + MIR3 SINE MIR 25 195 -13 28 0 0 0 chr5 81840120 81840148 -117790002 + AT_rich Low_complexity Low_complexity 1 28 0 451 329 22 13 chr5 81840828 81841053 -117789097 + LTR33 LTR ERVL 295 521 0 218 259 16 145 chr5 81841117 81841198 -117788952 - L2 LINE L2 -5 3308 3265 736 100 0 0 chr5 81841198 81841298 -117788852 + HY3 scRNA scRNA 1 100 -1 218 259 16 145 chr5 81841298 81841409 -117788741 - L2 LINE L2 -48 3265 3141 1072 122 0 7 chr5 81841479 81841626 -117788524 - AluSq/x SINE Alu -165 147 2 271 117 0 30 chr5 81841709 81841779 -117788371 - Alu SINE Alu -19 283 246 840 144 0 8 chr5 81841866 81841998 -117788152 + FLAM_C SINE Alu 2 132 -1 1973 124 98 54 chr5 81842960 81843370 -117786780 + MSTC LTR MaLR 1 428 0 353 235 142 105 chr5 81844222 81844353 -117785797 + L1MC4a LINE L1 5656 5781 -2027 609 110 0 0 chr5 81844353 81844444 -117785706 + (TA)n Simple_repeat Simple_repeat 2 92 0 353 235 142 105 chr5 81844444 81844559 -117785591 + L1MC4a LINE L1 5781 5911 -1897 189 0 0 0 chr5 81845408 81845429 -117784721 + (TA)n Simple_repeat Simple_repeat 1 21 0 273 57 0 0 chr5 81845429 81845464 -117784686 + (GA)n Simple_repeat Simple_repeat 1 35 0 2242 91 0 17 chr5 81845606 81845742 -117784408 + AluSx SINE Alu 1 138 -174 1897 81 25 109 chr5 81845742 81846062 -117784088 + AluYb8 SINE Alu 17 309 -9 2242 91 0 17 chr5 81846062 81846223 -117783927 + AluSx SINE Alu 138 293 -19 2278 119 3 0 chr5 81846249 81846561 -117783589 + AluSp SINE Alu 1 313 0 2017 166 0 3 chr5 81846806 81847119 -117783031 + AluSx SINE Alu 1 312 0 1795 176 3 0 chr5 81847925 81848221 -117781929 - AluJo SINE Alu -12 300 4 2303 89 3 0 chr5 81848305 81848607 -117781543 - AluSg SINE Alu -7 303 1 2167 94 3 3 chr5 81848843 81849131 -117781019 + AluSx SINE Alu 25 312 0 1897 174 3 3 chr5 81849462 81849766 -117780384 - AluJb SINE Alu -8 304 1 22 35 0 0 chr5 81849884 81849913 -117780237 + AT_rich Low_complexity Low_complexity 1 29 0 1047 204 35 48 chr5 81849982 81850253 -117779897 + MIR SINE MIR 1 262 0 767 266 60 26 chr5 81851024 81851257 -117778893 - MIR SINE MIR -2 260 20 1620 170 32 14 chr5 81851525 81851828 -117778322 + AluJb SINE Alu 1 308 0 336 346 19 0 chr5 81852293 81852397 -117777753 - MIR SINE MIR -61 147 42 321 294 84 17 chr5 81852465 81852584 -117777566 + MIR3 SINE MIR 33 159 -49 1433 172 13 19 chr5 81852586 81852900 -117777250 + MER33 DNA MER1_type 7 318 -6 1040 201 9 23 chr5 81852936 81853155 -117776995 - MER58A DNA MER1_type 0 224 9 21 0 0 0 chr5 81854100 81854121 -117776029 + AT_rich Low_complexity Low_complexity 1 21 0 218 179 15 60 chr5 81854132 81854199 -117775951 + GA-rich Low_complexity Low_complexity 1 64 0 513 220 110 8 chr5 81854231 81854349 -117775801 - MER5B DNA MER1_type -48 130 1 233 29 29 0 chr5 81854811 81854845 -117775305 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 599 241 98 20 chr5 81855046 81855249 -117774901 + L2 LINE L2 3094 3312 -1 2465 63 3 3 chr5 81855276 81855578 -117774572 + AluSp SINE Alu 1 302 -11 2116 140 7 0 chr5 81856027 81856327 -117773823 + AluSx SINE Alu 1 302 -10 1705 179 3 10 chr5 81856343 81856639 -117773511 + AluJb SINE Alu 1 294 -18 1965 131 14 17 chr5 81856642 81856939 -117773211 + AluSx SINE Alu 1 296 -16 2152 109 0 0 chr5 81856941 81857263 -117772887 + AluSp SINE Alu 1 322 0 2144 103 0 0 chr5 81857266 81857557 -117772593 + AluSg SINE Alu 1 291 -19 23 0 0 0 chr5 81857568 81857591 -117772559 + AT_rich Low_complexity Low_complexity 1 23 0 616 187 8 16 chr5 81858952 81859075 -117771075 + L2 LINE L2 3192 3313 0 365 261 93 80 chr5 81860461 81860636 -117769514 - MIR SINE MIR -61 147 19 862 188 3 159 chr5 81860652 81861004 -117769146 - AluJo SINE Alu -2 300 4 2352 78 3 19 chr5 81861173 81861481 -117768669 + AluSp SINE Alu 1 303 -10 21 57 0 0 chr5 81861528 81861563 -117768587 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr5 81862433 81862463 -117767687 + AT_rich Low_complexity Low_complexity 1 30 0 403 315 22 3 chr5 81862589 81862724 -117767426 - MIR3 SINE MIR -1 207 72 1766 125 57 14 chr5 81863085 81863097 -117767053 - AluSx SINE Alu -19 293 283 189 0 0 0 chr5 81863097 81863118 -117767032 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1766 125 57 14 chr5 81863118 81863386 -117766764 - AluSx SINE Alu -29 283 1 244 91 0 0 chr5 81863426 81863459 -117766691 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 697 150 6 28 chr5 81863459 81863639 -117766511 + CT-rich Low_complexity Low_complexity 2 177 0 1386 131 16 0 chr5 81863645 81863890 -117766260 - L1MA8 LINE L1 -11 6280 6032 928 256 32 10 chr5 81863918 81864231 -117765919 + L1ME3 LINE L1 5631 5950 -220 287 261 0 0 chr5 81864344 81864413 -117765737 + L1ME3 LINE L1 6009 6077 -85 1597 174 66 7 chr5 81864700 81864988 -117765162 + AluJo SINE Alu 1 305 -7 2176 69 22 4 chr5 81865224 81865518 -117764632 - AluSc SINE Alu 0 299 1 201 74 0 0 chr5 81865796 81865823 -117764327 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 9345 136 28 30 chr5 81866392 81866553 -117763597 - L1MA3 LINE L1 0 6305 6145 2419 80 7 0 chr5 81866553 81866855 -117763295 - AluSc SINE Alu -2 307 4 9345 136 28 30 chr5 81866855 81866914 -117763236 - L1MA3 LINE L1 -160 6145 6087 2301 86 10 0 chr5 81866914 81867204 -117762946 + AluSp SINE Alu 3 295 -18 9345 136 28 30 chr5 81867204 81869966 -117760184 - L1MA3 LINE L1 -218 6087 3327 2123 141 3 3 chr5 81869967 81870272 -117759878 - AluSx SINE Alu -5 307 3 1255 118 0 0 chr5 81870819 81870980 -117759170 - AluSg/x SINE Alu -17 295 135 391 250 0 0 chr5 81870981 81871069 -117759081 + L1MC4 LINE L1 6616 6703 -1339 192 152 0 0 chr5 81871088 81871121 -117759029 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 327 307 0 0 chr5 81871127 81871215 -117758935 + L1MC4 LINE L1 6616 6703 -1339 325 315 0 0 chr5 81871158 81871247 -117758903 - L1MC4 LINE L1 -1340 6702 6614 * 210 164 33 16 chr5 81871250 81871311 -117758839 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 518 145 12 0 chr5 81871411 81871494 -117758656 - AluS SINE Alu -229 84 1 339 294 57 57 chr5 81871536 81871747 -117758403 + MIR SINE MIR 2 212 -50 579 304 55 14 chr5 81872395 81872612 -117757538 + MIR SINE MIR 24 249 -13 2264 102 3 0 chr5 81872737 81873032 -117757118 + AluSx SINE Alu 1 296 -16 229 177 48 16 chr5 81873032 81873094 -117757056 + Charlie1a DNA MER1_type 88 151 -1304 1933 157 19 16 chr5 81873104 81873367 -117756783 + L1M4 LINE L1 5431 5697 -487 1599 172 57 35 chr5 81873367 81873734 -117756416 - THE1C LTR MaLR 0 375 1 1933 157 19 16 chr5 81873734 81873840 -117756310 + L1M4 LINE L1 5697 5801 -383 754 177 59 54 chr5 81873840 81874026 -117756124 - MER20 DNA MER1_type -32 187 1 2245 182 79 46 chr5 81874032 81874496 -117755654 + Charlie1a DNA MER1_type 208 700 -2061 2324 102 0 10 chr5 81874496 81874801 -117755349 + AluSx SINE Alu 1 302 -10 2245 182 79 46 chr5 81874801 81874984 -117755166 + Charlie1a DNA MER1_type 700 876 -579 2172 96 48 0 chr5 81874989 81875281 -117754869 + AluSx SINE Alu 1 306 -6 358 271 160 0 chr5 81875332 81875398 -117754752 - L1MA10 LINE L1 0 6334 6269 614 237 39 99 chr5 81875398 81875753 -117754397 - L1ME1 LINE L1 -80 6086 5753 2249 107 3 0 chr5 81875760 81876060 -117754090 - AluSp SINE Alu -12 301 1 549 211 102 0 chr5 81876082 81876210 -117753940 - FRAM SINE Alu -8 168 28 1235 112 121 5 chr5 81876211 81876417 -117753733 - MER30 DNA MER1_type 0 230 1 637 140 19 9 chr5 81876423 81876530 -117753620 - FLAM_C SINE Alu -24 119 12 1437 141 107 11 chr5 81876580 81876842 -117753308 - AluJb SINE Alu -4 308 22 1632 183 55 109 chr5 81876844 81877316 -117752834 - L1ME1 LINE L1 -449 5717 5221 2444 87 0 3 chr5 81877316 81877627 -117752523 - AluSg SINE Alu 0 310 1 1632 183 55 109 chr5 81877627 81877648 -117752502 - L1ME1 LINE L1 -945 5221 5270 1817 176 3 10 chr5 81877648 81877955 -117752195 + AluJb SINE Alu 1 305 -7 1632 183 55 109 chr5 81877955 81878035 -117752115 - L1ME1 LINE L1 -895 5271 5188 598 142 75 30 chr5 81878036 81878170 -117751980 - AluJo SINE Alu -58 254 115 1866 223 98 11 chr5 81878172 81878733 -117751417 - L1ME1 LINE L1 -1770 4376 3767 26 30 0 0 chr5 81878739 81878772 -117751378 + AT_rich Low_complexity Low_complexity 1 33 0 688 270 80 8 chr5 81878894 81879157 -117750993 - L1ME1 LINE L1 -2309 3837 3556 * 2615 229 52 42 chr5 81879151 81880200 -117749950 + L1M4 LINE L1 2291 3350 -2796 182 83 0 56 chr5 81880265 81880301 -117749849 + L2 LINE L2 3280 3313 0 2464 63 3 0 chr5 81880357 81880657 -117749493 - AluSg SINE Alu -9 301 1 216 172 0 0 chr5 81881013 81881071 -117749079 + G-rich Low_complexity Low_complexity 1 58 0 2334 87 3 10 chr5 81882766 81883077 -117747073 - AluSx SINE Alu -3 309 1 1712 136 18 79 chr5 81884372 81884567 -117745583 - AluJb SINE Alu 0 312 107 2150 112 7 0 chr5 81884567 81884861 -117745289 - AluSx SINE Alu -16 296 1 2085 96 24 14 chr5 81884864 81885157 -117744993 - AluSq SINE Alu -4 309 14 1712 136 18 79 chr5 81885157 81885287 -117744863 - AluJb SINE Alu -207 105 3 32 0 0 0 chr5 81885949 81885981 -117744169 + AT_rich Low_complexity Low_complexity 1 32 0 330 265 154 32 chr5 81886035 81886903 -117743247 - HAL1 LINE L1 -415 2092 1037 1707 190 0 23 chr5 81886903 81887208 -117742942 - AluJb SINE Alu -14 298 1 330 265 154 32 chr5 81887208 81887241 -117742909 - HAL1 LINE L1 -1470 1037 1009 1712 136 18 79 chr5 81889616 81889811 -117740339 - AluJb SINE Alu 0 312 107 2150 112 7 0 chr5 81889811 81890105 -117740045 - AluSx SINE Alu -16 296 1 2085 96 24 14 chr5 81890108 81890401 -117739749 - AluSq SINE Alu -4 309 14 1712 136 18 79 chr5 81890401 81890531 -117739619 - AluJb SINE Alu -207 105 3 32 0 0 0 chr5 81891193 81891225 -117738925 + AT_rich Low_complexity Low_complexity 1 32 0 330 265 142 38 chr5 81891279 81892147 -117738003 - HAL1 LINE L1 -415 2092 944 1707 190 0 23 chr5 81892147 81892452 -117737698 - AluJb SINE Alu -14 298 1 330 265 142 38 chr5 81892452 81892746 -117737404 - HAL1 LINE L1 -1563 944 682 2198 135 35 16 chr5 81894334 81894705 -117735445 - MLT1B LTR MaLR 0 390 13 478 274 139 14 chr5 81895036 81895259 -117734891 - MIR SINE MIR 0 262 12 2419 90 0 0 chr5 81895394 81895704 -117734446 + AluY SINE Alu 1 310 -1 1971 130 3 3 chr5 81895936 81896228 -117733922 + AluSx SINE Alu 1 292 -20 717 242 92 36 chr5 81896375 81896710 -117733440 - L1MC4 LINE L1 0 8042 7689 218 352 28 0 chr5 81898188 81898259 -117731891 + L2 LINE L2 3184 3256 -16 4772 145 46 46 chr5 81898343 81899632 -117730518 - L1MB7 LINE L1 -19 6165 4886 2249 103 3 0 chr5 81899752 81900044 -117730106 - AluSg SINE Alu -17 293 1 693 155 13 65 chr5 81900066 81900221 -117729929 - AluJo SINE Alu -26 286 140 2033 86 20 7 chr5 81900425 81900728 -117729422 - AluY SINE Alu -1 310 4 709 131 31 15 chr5 81900750 81900880 -117729270 - AluJo SINE Alu -169 133 2 2414 78 0 0 chr5 81900970 81901264 -117728886 + AluSg SINE Alu 2 295 -15 2008 146 7 0 chr5 81901602 81901903 -117728247 - AluSq SINE Alu -10 303 1 541 254 148 0 chr5 81902029 81902171 -117727979 - MIR SINE MIR -46 216 54 192 295 32 42 chr5 81903434 81903529 -117726621 - L2 LINE L2 -1036 2278 2185 1120 314 72 59 chr5 81903534 81903664 -117726486 - L2 LINE L2 -19 3294 3167 2519 55 0 0 chr5 81903664 81903955 -117726195 + AluY SINE Alu 1 291 -20 1120 314 72 59 chr5 81903955 81903970 -117726180 - L2 LINE L2 -146 3167 3154 2272 88 3 13 chr5 81903970 81904275 -117725875 + AluSx SINE Alu 1 302 -10 1120 314 72 59 chr5 81904275 81904429 -117725721 - L2 LINE L2 -159 3154 3003 1771 122 63 0 chr5 81904429 81904699 -117725451 + AluSx SINE Alu 1 287 -25 1120 314 72 59 chr5 81904699 81905176 -117724974 - L2 LINE L2 -310 3003 2493 621 212 174 5 chr5 81905176 81905360 -117724790 - MER20 DNA MER1_type -4 215 1 1120 314 72 59 chr5 81905360 81905656 -117724494 - L2 LINE L2 -820 2493 2202 838 307 71 59 chr5 81905677 81906325 -117723825 - L2 LINE L2 -1459 1855 1200 2024 99 88 0 chr5 81907548 81907831 -117722319 - AluSp SINE Alu -5 308 1 2181 53 46 56 chr5 81907987 81908290 -117721860 + AluY SINE Alu 1 300 -11 2090 137 0 6 chr5 81908443 81908756 -117721394 - AluSx SINE Alu -1 311 1 22 0 0 0 chr5 81908758 81908780 -117721370 + AT_rich Low_complexity Low_complexity 1 22 0 673 213 0 0 chr5 81908971 81909098 -117721052 - FLAM_A SINE Alu -5 128 2 2042 116 3 7 chr5 81909299 81909593 -117720557 - AluSx SINE Alu -19 293 1 359 212 235 15 chr5 81909681 81909813 -117720337 - MER58C DNA MER1_type 0 215 55 261 189 128 92 chr5 81909953 81910149 -117720001 - L1MC5 LINE L1 -36 7925 7723 * 1055 219 47 69 chr5 81910146 81910639 -117719511 - L1M4 LINE L1 -1331 4815 4334 993 198 35 0 chr5 81910778 81910980 -117719170 + AluJo SINE Alu 86 294 -18 1874 159 0 10 chr5 81911178 81911468 -117718682 - AluJb SINE Alu -25 287 1 2091 122 3 10 chr5 81911531 81911835 -117718315 - AluSc SINE Alu -7 302 1 664 224 46 41 chr5 81911915 81912111 -117718039 - MER20 DNA MER1_type -1 218 22 310 374 111 39 chr5 81912731 81913676 -117716474 - L2 LINE L2 -1667 1647 635 2147 121 3 0 chr5 81913699 81913996 -117716154 + AluSx SINE Alu 1 298 -14 542 224 175 6 chr5 81914133 81914316 -117715834 - MER58C DNA MER1_type -1 214 1 25 31 0 0 chr5 81914733 81914765 -117715385 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 81915385 81915408 -117714742 + AT_rich Low_complexity Low_complexity 1 23 0 1190 137 113 0 chr5 81915478 81915690 -117714460 - MER46A DNA MER2_type 0 236 1 187 405 70 38 chr5 81916802 81916960 -117713190 - L2 LINE L2 -2 3270 3108 280 287 32 133 chr5 81917470 81917658 -117712492 - MIR3 SINE MIR -8 200 32 2110 134 3 0 chr5 81917708 81918006 -117712144 - AluSx SINE Alu -13 299 1 246 182 91 0 chr5 81918226 81918303 -117711847 + (TATATG)n Simple_repeat Simple_repeat 4 87 0 2970 215 35 8 chr5 81919588 81920212 -117709938 - MER82 DNA MER2_type -2 651 11 1861 174 0 7 chr5 81920494 81920793 -117709357 - AluJo SINE Alu -15 297 1 579 299 75 0 chr5 81920817 81921071 -117709079 - L1ME4a LINE L1 -253 5868 5596 21 57 0 0 chr5 81921379 81921414 -117708736 + AT_rich Low_complexity Low_complexity 1 35 0 860 219 0 18 chr5 81921886 81922050 -117708100 + FRAM SINE Alu 1 161 -5 23 33 0 0 chr5 81922310 81922340 -117707810 + AT_rich Low_complexity Low_complexity 1 30 0 413 250 24 48 chr5 81923927 81924051 -117706099 - L2 LINE L2 0 3313 3193 783 296 70 10 chr5 81925745 81926059 -117704091 + L1ME4a LINE L1 5536 5868 -253 26 0 0 0 chr5 81926711 81926737 -117703413 + AT_rich Low_complexity Low_complexity 1 26 0 1678 174 7 30 chr5 81926956 81927260 -117702890 + AluJo SINE Alu 1 297 -15 384 291 35 28 chr5 81927570 81927711 -117702439 + MIR3 SINE MIR 57 198 -10 2347 82 3 0 chr5 81927904 81928197 -117701953 + AluSq SINE Alu 1 294 -19 1385 135 5 5 chr5 81928322 81928529 -117701621 + AluSg/x SINE Alu 87 293 -19 800 160 15 0 chr5 81932114 81932245 -117697905 - FLAM_C SINE Alu 0 133 1 2418 80 0 0 chr5 81933009 81933308 -117696842 + AluSg1 SINE Alu 3 301 -8 348 24 0 0 chr5 81933308 81933349 -117696801 + (TA)n Simple_repeat Simple_repeat 2 42 0 27 49 0 0 chr5 81933863 81933904 -117696246 + AT_rich Low_complexity Low_complexity 1 41 0 532 235 0 0 chr5 81934364 81934466 -117695684 + Tigger3b DNA MER2_type 1 102 -1129 3713 106 60 86 chr5 81934468 81935292 -117694858 + Tigger3b DNA MER2_type 277 1078 -153 13394 113 52 53 chr5 81935295 81937716 -117692434 - Tigger1 DNA MER2_type 0 2418 1 1106 189 182 0 chr5 81937724 81938015 -117692135 - MER2 DNA MER2_type 0 344 1 2251 95 0 3 chr5 81938124 81938420 -117691730 + AluSc SINE Alu 1 295 -14 389 325 131 0 chr5 81938615 81938775 -117691375 - MIR SINE MIR -77 185 5 2261 97 3 22 chr5 81939779 81940098 -117690052 - AluSq SINE Alu 0 313 1 829 149 84 164 chr5 81940176 81940438 -117689712 - AluJo SINE Alu -8 304 64 454 127 0 0 chr5 81940618 81940681 -117689469 - AluJo SINE Alu -249 63 1 27 29 0 0 chr5 81941162 81941196 -117688954 + AT_rich Low_complexity Low_complexity 1 34 0 195 129 0 0 chr5 81942872 81942903 -117687247 + (TATG)n Simple_repeat Simple_repeat 2 32 0 222 37 0 0 chr5 81943538 81943565 -117686585 + (TAA)n Simple_repeat Simple_repeat 1 27 0 348 324 97 22 chr5 81943619 81943756 -117686394 - MIR SINE MIR -56 206 50 2158 96 38 0 chr5 81943756 81944048 -117686102 + AluSp SINE Alu 1 303 -10 348 324 97 22 chr5 81944048 81944095 -117686055 - MIR SINE MIR -212 50 8 2167 100 0 0 chr5 81944120 81944431 -117685719 - AluSg SINE Alu 0 311 1 330 315 210 18 chr5 81944548 81944767 -117685383 - MIR SINE MIR 0 262 2 2359 111 0 13 chr5 81945202 81945517 -117684633 - AluSx SINE Alu -1 311 1 2074 147 0 0 chr5 81945629 81945929 -117684221 + AluJb SINE Alu 1 300 -12 6243 132 26 4 chr5 81945980 81947504 -117682646 - L1MA3 LINE L1 0 6305 4747 883 240 52 13 chr5 81947519 81947748 -117682402 - L2 LINE L2 -969 2345 2108 302 255 99 21 chr5 81947831 81947911 -117682239 + L1MC4 LINE L1 7507 7579 -463 2082 97 0 63 chr5 81947911 81948230 -117681920 + AluSg SINE Alu 1 299 -11 302 255 99 21 chr5 81948230 81948290 -117681860 + L1MC4 LINE L1 7579 7658 -384 321 258 198 0 chr5 81948340 81948507 -117681643 + L1MC4 LINE L1 7764 7963 -79 24 67 0 0 chr5 81948509 81948554 -117681596 + AT_rich Low_complexity Low_complexity 1 45 0 2127 277 154 24 chr5 81948579 81949539 -117680611 - L2 LINE L2 -1202 2112 1028 408 295 143 24 chr5 81949555 81949806 -117680344 - L2 LINE L2 -957 2357 2077 249 224 0 0 chr5 81949939 81949997 -117680153 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 1901 125 49 7 chr5 81950125 81950413 -117679737 + AluSx SINE Alu 1 300 -12 535 153 51 51 chr5 81950778 81950876 -117679274 + AluJb SINE Alu 191 288 -24 1162 139 27 5 chr5 81951604 81951791 -117678359 - AluJb SINE Alu -10 302 112 2297 110 0 0 chr5 81952702 81953010 -117677140 - AluSc SINE Alu -1 308 1 370 262 92 57 chr5 81953035 81953264 -117676886 - L2 LINE L2 -1 3312 3076 27 49 0 0 chr5 81953598 81953639 -117676511 + AT_rich Low_complexity Low_complexity 1 41 0 251 235 20 49 chr5 81954853 81954955 -117675195 + T-rich Low_complexity Low_complexity 3 101 0 2533 75 0 0 chr5 81954957 81955264 -117674886 - AluSc SINE Alu -2 307 1 283 197 0 15 chr5 81955654 81955720 -117674430 - MER116 DNA Mariner 0 80 16 1982 136 0 17 chr5 81956086 81956387 -117673763 - AluSq SINE Alu -13 300 5 551 203 8 24 chr5 81956851 81956974 -117673176 + FRAM SINE Alu 47 167 -9 1172 179 52 79 chr5 81956978 81957094 -117673056 + AluJo SINE Alu 1 119 -186 357 109 0 0 chr5 81957094 81957149 -117673001 + (CA)n Simple_repeat Simple_repeat 1 55 0 1172 179 52 79 chr5 81957149 81957345 -117672805 + AluJo SINE Alu 119 305 0 2768 6 0 28 chr5 81957440 81957759 -117672391 + AluYa5 SINE Alu 1 310 -1 1509 165 107 0 chr5 81958101 81958362 -117671788 - AluJb SINE Alu -23 289 1 1317 174 5 5 chr5 81958666 81958878 -117671272 + AluJb SINE Alu 85 296 -16 22 0 0 0 chr5 81960051 81960073 -117670077 + AT_rich Low_complexity Low_complexity 1 22 0 1691 133 43 68 chr5 81961173 81961525 -117668625 + MER2 DNA MER2_type 2 344 0 2292 95 0 3 chr5 81962466 81962762 -117667388 + AluSx SINE Alu 1 295 -17 236 332 78 24 chr5 81963076 81963281 -117666869 + MIR SINE MIR 28 243 -19 22 35 0 0 chr5 81963562 81963591 -117666559 + GC_rich Low_complexity Low_complexity 1 29 0 25 65 0 0 chr5 81963661 81963707 -117666443 + GC_rich Low_complexity Low_complexity 1 46 0 245 278 0 0 chr5 81963762 81963852 -117666298 + GA-rich Low_complexity Low_complexity 2 91 0 2733 113 38 61 chr5 81965494 81966119 -117664031 - MER4B LTR ERV1 0 779 1 461 290 95 6 chr5 81966377 81966546 -117663604 + MIR SINE MIR 73 256 -6 418 252 84 46 chr5 81966668 81966799 -117663351 - L2 LINE L2 0 3272 3137 383 258 77 71 chr5 81967029 81967143 -117663007 - MIR3 SINE MIR -2 206 89 1899 157 0 10 chr5 81967143 81967449 -117662701 - AluJb SINE Alu -9 303 1 383 258 77 71 chr5 81967449 81967516 -117662634 - MIR3 SINE MIR -119 89 24 1288 247 171 5 chr5 81967520 81968007 -117662143 - L2 LINE L2 0 3313 2748 256 294 0 47 chr5 81968114 81968199 -117661951 - L2 LINE L2 -5 3308 3228 1492 143 75 19 chr5 81969059 81969366 -117660784 - MER33 DNA MER1_type 0 324 1 294 296 41 20 chr5 81969434 81969532 -117660618 - L2 LINE L2 -35 3237 3138 2324 88 0 3 chr5 81970530 81970826 -117659324 + AluSq SINE Alu 1 295 -18 392 284 108 23 chr5 81970848 81971024 -117659126 - L2 LINE L2 0 3313 3123 261 227 31 82 chr5 81971225 81971322 -117658828 - MIR3 SINE MIR -27 181 90 340 290 228 12 chr5 81971332 81971494 -117658656 - MIR SINE MIR -43 219 23 384 300 0 50 chr5 81972127 81972247 -117657903 + MIR SINE MIR 19 132 -76 733 268 191 60 chr5 81972251 81972681 -117657469 + L2 LINE L2 2804 3297 -16 2145 131 0 3 chr5 81972681 81973012 -117657138 + AluSx SINE Alu 1 312 0 733 268 191 60 chr5 81973012 81973032 -117657118 + L2 LINE L2 3297 3313 0 3885 149 42 11 chr5 81974287 81974450 -117655700 + L1MB7 LINE L1 5275 5431 -753 2743 158 27 14 chr5 81974450 81974759 -117655391 + L1MA4 LINE L1 5740 6062 -238 1610 132 81 48 chr5 81974759 81975055 -117655095 + AluSx SINE Alu 1 305 0 2743 158 27 14 chr5 81975055 81975296 -117654854 + L1MA4 LINE L1 6062 6298 -2 3885 149 42 11 chr5 81975296 81975642 -117654508 + L1MB7 LINE L1 5431 5765 -419 2023 93 82 0 chr5 81975642 81975921 -117654229 + AluY SINE Alu 1 302 -9 1461 166 113 19 chr5 81975925 81976190 -117653960 + AluJo SINE Alu 1 290 -22 3885 149 42 11 chr5 81976190 81976589 -117653561 + L1MB7 LINE L1 5767 6184 0 1630 181 17 3 chr5 81977605 81977893 -117652257 + AluJo SINE Alu 1 292 -20 348 83 0 0 chr5 81978473 81978521 -117651629 + (GA)n Simple_repeat Simple_repeat 1 48 0 2198 116 0 3 chr5 81978785 81979087 -117651063 + AluSg SINE Alu 1 301 -9 187 258 155 26 chr5 81979563 81979731 -117650419 + MIR SINE MIR 43 234 -28 7238 48 26 0 chr5 81979795 81980669 -117649481 - MER11D LTR ERVK 0 897 1 219 117 33 50 chr5 81981174 81981234 -117648916 + (TGAA)n Simple_repeat Simple_repeat 1 59 0 395 316 88 61 chr5 81981431 81981581 -117648569 - MIR SINE MIR -23 239 80 1755 184 75 26 chr5 81981581 81981929 -117648221 - MLT1A1 LTR MaLR 0 365 1 395 316 88 61 chr5 81981929 81982006 -117648144 - MIR SINE MIR -182 80 6 2439 70 0 13 chr5 81982134 81982433 -117647717 + AluY SINE Alu 1 295 -16 1682 143 21 35 chr5 81982452 81982738 -117647412 + AluSg SINE Alu 1 282 -28 31 26 0 0 chr5 81982738 81982776 -117647374 + AT_rich Low_complexity Low_complexity 1 38 0 854 252 81 30 chr5 81982908 81983241 -117646909 + L1ME4a LINE L1 5483 5832 -289 559 188 0 0 chr5 81983272 81983368 -117646782 + Charlie1 DNA MER1_type 50 145 -2616 * 2669 138 37 66 chr5 81983360 81983470 -117646680 + Charlie1 DNA MER1_type 2207 2319 -442 2273 109 3 13 chr5 81983470 81983783 -117646367 + AluSx SINE Alu 1 310 -2 2669 138 37 66 chr5 81983783 81984244 -117645906 + Charlie1 DNA MER1_type 2319 2761 0 317 239 67 8 chr5 81984363 81984497 -117645653 + L1ME4a LINE L1 5977 6118 -3 1877 145 7 0 chr5 81985991 81986307 -117643843 - AluSx SINE Alu 0 318 1 586 200 27 0 chr5 81986966 81987076 -117643074 + MER20 DNA MER1_type 50 162 -57 223 315 37 46 chr5 81987968 81988076 -117642074 + L2 LINE L2 2902 3008 -264 1959 151 0 19 chr5 81988216 81988534 -117641616 - AluJo SINE Alu 0 312 1 352 203 76 0 chr5 81988907 81988986 -117641164 + L2 LINE L2 3228 3312 -1 2476 54 0 0 chr5 81989087 81989381 -117640769 - AluY SINE Alu -17 294 1 241 217 0 0 chr5 81989420 81989466 -117640684 - MIR SINE MIR -127 81 36 268 32 0 0 chr5 81990231 81990262 -117639888 - MADE1 DNA Mariner -4 76 46 252 221 15 59 chr5 81990764 81990832 -117639318 + L2 LINE L2 3249 3313 0 200 410 10 73 chr5 81991125 81991330 -117638820 - L2 LINE L2 -87 3185 2994 2172 144 49 0 chr5 81992199 81992526 -117637624 + MER7A DNA MER2_type 2 342 -4 243 259 79 22 chr5 81993405 81993544 -117636606 + L1MEd LINE L1 1429 1575 -5059 * 854 266 80 40 chr5 81993533 81993914 -117636236 + L1MEd LINE L1 1497 2006 -4638 2314 106 3 0 chr5 81993914 81994216 -117635934 - AluSp SINE Alu -10 303 1 854 266 80 40 chr5 81994216 81994402 -117635748 + L1MEd LINE L1 2006 2183 -4461 411 275 51 17 chr5 81994520 81994698 -117635452 + L1MEd LINE L1 2409 2592 -4233 558 174 0 64 chr5 81994716 81994825 -117635325 + FLAM_C SINE Alu 35 136 -7 2814 241 110 82 chr5 81994831 81995875 -117634275 + L1MEd LINE L1 2587 3601 -3043 2057 138 3 3 chr5 81995875 81996179 -117633971 + AluSx SINE Alu 1 304 -8 2814 241 110 82 chr5 81996179 81996639 -117633511 + L1MEd LINE L1 3601 4047 -2597 2345 110 0 0 chr5 81996639 81996949 -117633201 + AluSg SINE Alu 1 310 0 1774 181 0 9 chr5 81996959 81997274 -117632876 + AluJo SINE Alu 1 312 0 2814 241 110 82 chr5 81997274 81997516 -117632634 + L1MEd LINE L1 4055 4405 -2239 2016 94 7 25 chr5 81997516 81997802 -117632348 + AluSq SINE Alu 1 281 -32 2814 241 110 82 chr5 81997802 81997888 -117632262 + L1MEd LINE L1 4405 4487 -2157 3844 103 21 2 chr5 81998567 81999101 -117631049 + L1PA16 LINE L1 5612 6155 -11 1981 149 0 3 chr5 81999101 81999402 -117630748 + AluSx SINE Alu 1 300 -12 2571 72 0 0 chr5 82000390 82000697 -117629453 - AluSq SINE Alu -6 307 1 387 209 75 123 chr5 82000701 82000888 -117629262 + MER5B DNA MER1_type 1 178 0 697 183 13 39 chr5 82001461 82001614 -117628536 - MIR SINE MIR -10 252 104 30 45 0 0 chr5 82002338 82002382 -117627768 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr5 82012966 82012987 -117617163 + AT_rich Low_complexity Low_complexity 1 21 0 279 211 0 0 chr5 82013133 82013190 -117616960 - MER2 DNA MER2_type 0 345 289 1648 168 3 34 chr5 82013295 82013593 -117616557 - AluJo SINE Alu -23 289 1 417 309 138 11 chr5 82013594 82013782 -117616368 - MIR SINE MIR -49 213 2 609 184 0 20 chr5 82014410 82014562 -117615588 + CT-rich Low_complexity Low_complexity 2 150 0 1591 186 26 10 chr5 82014562 82014869 -117615281 - AluJo SINE Alu 0 312 1 24 32 0 0 chr5 82014879 82014910 -117615240 + AT_rich Low_complexity Low_complexity 1 31 0 240 328 189 28 chr5 82015093 82015480 -117614670 - L2 LINE L2 -20 3252 2804 414 246 111 0 chr5 82016531 82016657 -117613493 - MIR SINE MIR -12 250 111 822 111 0 0 chr5 82018483 82018591 -117611559 - AluSp SINE Alu -205 108 1 1983 98 65 4 chr5 82019264 82019539 -117610611 + AluSx SINE Alu 1 292 -20 198 0 0 0 chr5 82019664 82019686 -117610464 + (CAGG)n Simple_repeat Simple_repeat 3 24 0 181 229 62 0 chr5 82019927 82019975 -117610175 + MIR SINE MIR 86 136 -126 2231 195 31 16 chr5 82020039 82020490 -117609660 + MER39 LTR ERV1 250 707 0 191 283 50 0 chr5 82020490 82020550 -117609600 + MIR SINE MIR 132 194 -68 279 0 0 0 chr5 82021075 82021106 -117609044 + (CA)n Simple_repeat Simple_repeat 2 32 0 916 272 135 57 chr5 82021912 82022145 -117608005 - L2 LINE L2 -2 3311 3097 1729 182 66 44 chr5 82022145 82022511 -117607639 - MLT1C LTR MaLR 0 467 88 1969 128 45 0 chr5 82022511 82022800 -117607350 - AluSx SINE Alu -10 302 1 1729 182 66 44 chr5 82022800 82022888 -117607262 - MLT1C LTR MaLR -379 88 3 916 272 135 57 chr5 82022888 82023209 -117606941 - L2 LINE L2 -216 3097 2691 2300 82 0 41 chr5 82023209 82023526 -117606624 + AluSx SINE Alu 1 304 -8 916 272 135 57 chr5 82023526 82023593 -117606557 - L2 LINE L2 -622 2691 2631 393 274 142 0 chr5 82023869 82023975 -117606175 + L2 LINE L2 3191 3311 -2 1963 158 0 7 chr5 82024091 82024401 -117605749 + AluSx SINE Alu 3 310 -2 1605 157 6 67 chr5 82024630 82024769 -117605381 + AluJo SINE Alu 2 148 -164 2187 126 0 0 chr5 82024769 82025084 -117605066 + AluSx SINE Alu 1 315 0 1605 157 6 67 chr5 82025084 82025254 -117604896 + AluJo SINE Alu 148 294 -18 282 286 57 7 chr5 82025339 82025371 -117604779 + L1M4 LINE L1 5124 5153 -993 357 24 0 0 chr5 82025371 82025413 -117604737 + (CA)n Simple_repeat Simple_repeat 2 43 0 282 286 57 7 chr5 82025413 82025520 -117604630 + L1M4 LINE L1 5153 5270 -876 358 267 38 8 chr5 82025847 82025978 -117604172 - L1ME4a LINE L1 -3 6118 5984 836 158 7 7 chr5 82026998 82027137 -117603013 + AluJo SINE Alu 2 140 -172 1636 149 0 27 chr5 82027137 82027398 -117602752 + AluSx SINE Alu 1 254 -58 271 294 59 25 chr5 82027494 82027613 -117602537 - L2 LINE L2 -17 3255 3133 2484 72 3 0 chr5 82028044 82028349 -117601801 + AluSc SINE Alu 1 306 -3 203 79 26 0 chr5 82029790 82029828 -117600322 + (TTTTTG)n Simple_repeat Simple_repeat 1 39 0 2204 132 0 0 chr5 82029877 82030187 -117599963 - AluSg SINE Alu 0 310 1 287 280 93 53 chr5 82030214 82030364 -117599786 - MIR3 SINE MIR -49 159 4 222 286 29 29 chr5 82030793 82030898 -117599252 + L2 LINE L2 2550 2654 -660 372 22 0 0 chr5 82031078 82031123 -117599027 + (TC)n Simple_repeat Simple_repeat 1 45 0 1802 170 3 52 chr5 82031928 82032252 -117597898 - AluJb SINE Alu -3 309 2 369 0 0 0 chr5 82032252 82032293 -117597857 + (TTA)n Simple_repeat Simple_repeat 2 42 0 841 171 123 0 chr5 82032293 82032439 -117597711 - AluJo SINE Alu -29 283 120 22 0 0 0 chr5 82032789 82032811 -117597339 + AT_rich Low_complexity Low_complexity 1 22 0 1567 212 20 58 chr5 82032834 82033231 -117596919 + L1M4 LINE L1 14 395 -6147 1742 180 31 36 chr5 82033232 82033588 -117596562 + MLT2D LTR ERVL 3 356 -58 957 211 22 0 chr5 82033652 82033832 -117596318 + MLT1A2 LTR MaLR 191 374 0 1083 211 137 7 chr5 82033832 82034117 -117596033 + L1MB7 LINE L1 4961 5282 -864 21866 118 25 18 chr5 82034129 82037540 -117592610 + L1PA13 LINE L1 11 3445 -2701 14489 92 1 0 chr5 82037640 82040404 -117589746 + L1PA7 LINE L1 3384 6153 -1 4226 166 27 21 chr5 82040404 82040455 -117589695 + L1MB7 LINE L1 5275 5324 -860 10723 152 10 0 chr5 82040455 82043179 -117586971 + L1PA13 LINE L1 3457 6149 -14 4226 166 27 21 chr5 82043179 82043978 -117586172 + L1MB7 LINE L1 5324 6130 -54 262 269 37 0 chr5 82044041 82044149 -117586001 - L1ME4a LINE L1 -44 6077 5966 258 313 45 0 chr5 82044202 82044336 -117585814 - HAL1 LINE L1 -651 1856 1717 1144 253 132 92 chr5 82044400 82045418 -117584732 - HAL1 LINE L1 -637 1870 786 2451 164 31 2 chr5 82045418 82045832 -117584318 + MSTB LTR MaLR 1 426 0 1144 253 132 92 chr5 82045832 82046124 -117584026 - HAL1 LINE L1 -1721 786 507 243 233 0 33 chr5 82046132 82046192 -117583958 - HAL1 LINE L1 -2189 318 261 282 211 63 42 chr5 82046350 82046445 -117583705 + LTR37B LTR ERV1 6 102 -366 533 196 127 65 chr5 82046554 82046799 -117583351 + LTR37B LTR ERV1 209 468 0 1607 191 71 37 chr5 82046802 82047152 -117582998 - MSTD LTR MaLR 0 396 35 1160 166 81 15 chr5 82047626 82047885 -117582265 - AluJb SINE Alu -36 276 1 28 133 0 0 chr5 82050979 82051024 -117579126 + GC_rich Low_complexity Low_complexity 1 45 0 206 297 0 14 chr5 82053629 82053703 -117576447 + T-rich Low_complexity Low_complexity 3 75 0 236 266 0 0 chr5 82055648 82055712 -117574438 + T-rich Low_complexity Low_complexity 1 64 0 31 44 0 0 chr5 82056531 82056576 -117573574 + GC_rich Low_complexity Low_complexity 1 45 0 180 0 0 0 chr5 82056582 82056602 -117573548 + (T)n Simple_repeat Simple_repeat 1 20 0 238 295 0 39 chr5 82056606 82056684 -117573466 + GA-rich Low_complexity Low_complexity 4 78 0 181 115 0 0 chr5 82056719 82056745 -117573405 + (C)n Simple_repeat Simple_repeat 1 26 0 312 189 89 89 chr5 82058630 82058720 -117571430 - L1M4c LINE L1 -5334 1050 961 188 139 28 0 chr5 82063426 82063462 -117566688 + C-rich Low_complexity Low_complexity 6 42 0 228 167 0 19 chr5 82065121 82065175 -117564975 + (CCCCAA)n Simple_repeat Simple_repeat 2 54 0 22 0 0 0 chr5 82065486 82065508 -117564642 + AT_rich Low_complexity Low_complexity 1 22 0 21 218 0 0 chr5 82066370 82066425 -117563725 + AT_rich Low_complexity Low_complexity 1 55 0 212 94 0 0 chr5 82067153 82067185 -117562965 + (A)n Simple_repeat Simple_repeat 1 32 0 196 189 0 0 chr5 82067457 82067494 -117562656 + A-rich Low_complexity Low_complexity 1 37 0 331 230 35 35 chr5 82067984 82068071 -117562079 + L1M4 LINE L1 3111 3197 -2949 41 23 0 0 chr5 82069456 82069499 -117560651 + AT_rich Low_complexity Low_complexity 1 43 0 255 314 0 0 chr5 82069867 82069953 -117560197 + A-rich Low_complexity Low_complexity 1 86 0 28 116 0 0 chr5 82070805 82070848 -117559302 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr5 82070973 82070994 -117559156 + AT_rich Low_complexity Low_complexity 1 21 0 223 195 0 0 chr5 82071033 82071074 -117559076 + A-rich Low_complexity Low_complexity 1 41 0 206 42 0 0 chr5 82072333 82072357 -117557793 + (C)n Simple_repeat Simple_repeat 1 24 0 447 292 58 29 chr5 82072735 82072872 -117557278 - MIR SINE MIR -109 153 13 1414 155 149 28 chr5 82072899 82073009 -117557141 + MLT1A1 LTR MaLR 5 100 -265 1716 151 0 47 chr5 82073009 82073327 -117556823 + AluJb SINE Alu 1 303 -9 1414 155 149 28 chr5 82073327 82073538 -117556612 + MLT1A1 LTR MaLR 100 365 0 885 257 156 30 chr5 82073539 82073664 -117556486 + MLT1D LTR MaLR 14 122 -383 2032 123 0 3 chr5 82073664 82073956 -117556194 - AluSx SINE Alu -20 292 2 885 257 156 30 chr5 82073956 82074260 -117555890 + MLT1D LTR MaLR 122 505 0 913 276 14 18 chr5 82074437 82074700 -117555450 - MIR SINE MIR -1 261 3 2052 108 0 7 chr5 82074747 82075044 -117555106 + AluSx SINE Alu 1 295 -17 1982 112 62 59 chr5 82077049 82077204 -117552946 + THE1C LTR MaLR 1 154 -221 2138 120 0 3 chr5 82077204 82077505 -117552645 - AluSx SINE Alu -12 300 1 1982 112 62 59 chr5 82077505 82077723 -117552427 + THE1C LTR MaLR 154 375 0 2920 59 3 0 chr5 82078027 82078381 -117551769 + THE1A LTR MaLR 1 355 0 751 302 70 13 chr5 82078432 82078900 -117551250 + L1ME4a LINE L1 5329 5819 -302 1723 141 0 56 chr5 82078908 82079212 -117550938 - AluJo SINE Alu -25 287 1 2988 183 92 58 chr5 82079223 82080128 -117550022 - LTR5 LTR ERVK 0 969 34 4338 78 5 2 chr5 82080130 82080692 -117549458 + LTR6A LTR ERV1 1 564 0 310 255 99 21 chr5 82080836 82080977 -117549173 + L1ME4a LINE L1 5969 6120 -1 197 286 100 0 chr5 82081532 82081602 -117548548 + MER5A DNA MER1_type 30 106 -83 244 0 56 0 chr5 82082240 82082250 -117547900 + (TTC)n Simple_repeat Simple_repeat 2 39 0 234 0 0 0 chr5 82082250 82082276 -117547874 + (TTC)n Simple_repeat Simple_repeat 2 27 0 248 91 0 0 chr5 82082297 82082330 -117547820 - L1MA9 LINE L1 0 6312 6280 1854 118 37 34 chr5 82082394 82082691 -117547459 + AluSx SINE Alu 1 298 -14 2218 136 43 3 chr5 82082798 82083173 -117546977 - MLT1B LTR MaLR 0 390 1 1902 158 46 9 chr5 82083330 82083678 -117546472 - MLT1A1 LTR MaLR 0 365 5 2198 102 7 0 chr5 82084229 82084514 -117545636 + AluSq SINE Alu 1 287 -26 351 65 0 0 chr5 82084514 82084560 -117545590 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 1588 148 16 100 chr5 82084609 82084656 -117545494 + MLT1B LTR MaLR 1 50 -340 2426 111 28 17 chr5 82084656 82085016 -117545134 - THE1B LTR MaLR 0 364 1 1588 148 16 100 chr5 82085016 82085347 -117544803 + MLT1B LTR MaLR 50 347 -43 990 204 200 68 chr5 82087186 82087682 -117542468 + MLT1E3 LTR MaLR 59 619 -5 2092 107 59 0 chr5 82087928 82088218 -117541932 + AluSx SINE Alu 1 307 -5 3359 131 63 4 chr5 82088580 82089139 -117541011 + MER39B LTR ERV1 1 592 -61 392 317 15 20 chr5 82089545 82089747 -117540403 + MIR SINE MIR 14 214 -48 583 121 91 0 chr5 82090135 82090234 -117539916 + AluSp/q SINE Alu 196 303 -10 361 243 171 26 chr5 82090471 82090623 -117539527 + MLT1H LTR MaLR 358 531 -18 1988 152 3 0 chr5 82091163 82091465 -117538685 + AluSx SINE Alu 1 303 -9 1990 109 8 0 chr5 82091613 82091880 -117538270 + AluSg SINE Alu 37 305 -5 303 161 0 0 chr5 82091968 82092024 -117538126 + (TCCA)n Simple_repeat Simple_repeat 1 56 0 973 290 78 32 chr5 82094852 82095316 -117534834 + MLT1J LTR MaLR 1 425 -21 2893 175 24 13 chr5 82095411 82095964 -117534186 - MER89 LTR ERV1 0 559 1 319 290 173 33 chr5 82096877 82097177 -117532973 + L2 LINE L2 2334 2675 -639 230 356 122 10 chr5 82097268 82097473 -117532677 + L2 LINE L2 2851 3078 -194 272 281 104 0 chr5 82098195 82098291 -117531859 - MIR SINE MIR -36 226 121 465 254 152 42 chr5 82098370 82098587 -117531563 - LTR16A LTR ERVL -66 391 151 1082 238 139 27 chr5 82098690 82099056 -117531094 + L2 LINE L2 2108 2514 -800 986 263 168 17 chr5 82099071 82099556 -117530594 + L2 LINE L2 2745 3312 -1 284 280 48 48 chr5 82100216 82100341 -117529809 + MIR3 SINE MIR 33 157 -51 1837 115 17 17 chr5 82101292 82101588 -117528562 - L1MA8 LINE L1 0 6291 5996 216 0 0 0 chr5 82102981 82103005 -117527145 + (A)n Simple_repeat Simple_repeat 1 24 0 277 159 32 0 chr5 82103459 82103522 -117526628 + CT-rich Low_complexity Low_complexity 2 66 0 593 199 99 0 chr5 82104571 82104702 -117525448 - MER5B DNA MER1_type -27 151 8 315 351 18 24 chr5 82104738 82104903 -117525247 + MER5A DNA MER1_type 21 184 -5 447 19 0 0 chr5 82104930 82104982 -117525168 + (TCTA)n Simple_repeat Simple_repeat 4 55 0 1610 145 0 4 chr5 82104983 82105225 -117524925 - AluSx SINE Alu -23 289 49 22 56 0 0 chr5 82105233 82105269 -117524881 + AT_rich Low_complexity Low_complexity 1 36 0 4475 136 6 54 chr5 82105851 82106632 -117523518 + Tigger2 DNA MER2_type 1 744 -1974 1393 187 28 0 chr5 82106702 82106953 -117523197 + Tigger2 DNA MER2_type 2451 2708 -10 251 353 33 20 chr5 82107731 82107881 -117522269 + L2 LINE L2 2894 3045 -227 592 287 220 0 chr5 82108062 82108376 -117521774 - L2 LINE L2 -2 3311 2929 319 167 106 0 chr5 82108570 82108636 -117521514 + L2 LINE L2 3235 3307 -6 647 119 0 51 chr5 82109924 82110061 -117520089 + FLAM_A SINE Alu 31 142 0 378 213 59 15 chr5 82110762 82110898 -117519252 - MIR SINE MIR -13 249 108 2077 156 44 6 chr5 82111079 82111506 -117518644 - L1MB3 LINE L1 0 6183 5703 2123 122 0 0 chr5 82111717 82112013 -117518137 - AluSx SINE Alu -16 296 1 391 223 38 32 chr5 82112841 82112970 -117517180 - MIR SINE MIR -21 241 113 2332 89 0 10 chr5 82113336 82113638 -117516512 + AluSx SINE Alu 1 299 -13 28 61 0 0 chr5 82113907 82113956 -117516194 + AT_rich Low_complexity Low_complexity 1 49 0 2258 106 0 7 chr5 82114374 82114675 -117515475 + AluSx SINE Alu 1 299 -13 2257 110 3 0 chr5 82114677 82115017 -117515133 + AluSx SINE Alu 1 341 0 348 291 93 26 chr5 82116350 82116501 -117513649 - MIR SINE MIR -82 180 20 2085 122 148 13 chr5 82116813 82117190 -117512960 - MSTA LTR MaLR 0 428 1 307 345 59 82 chr5 82118448 82118837 -117511313 - L2 LINE L2 -6 3266 2887 32893 102 15 56 chr5 82120429 82122517 -117507633 - L1PA7 LINE L1 -1 6153 3981 2069 120 3 13 chr5 82122517 82122825 -117507325 - AluSg SINE Alu -4 306 2 32893 102 15 56 chr5 82122825 82127152 -117502998 - L1PA7 LINE L1 -2173 3981 12 396 233 10 10 chr5 82127505 82127608 -117502542 - MIR SINE MIR 0 262 160 277 230 159 48 chr5 82128110 82128236 -117501914 - MIR SINE MIR -77 185 46 311 218 0 51 chr5 82129586 82129664 -117500486 + L2 LINE L2 3240 3313 0 294 29 0 0 chr5 82130116 82130151 -117499999 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 539 141 0 12 chr5 82132539 82132624 -117497526 + AluJ/FLAM SINE Alu 13 96 -216 210 333 32 11 chr5 82132960 82133053 -117497097 - MER5A DNA MER1_type -6 183 89 1664 240 58 61 chr5 82133704 82133916 -117496234 - L1MC4a LINE L1 -88 6033 5822 2072 143 0 10 chr5 82133916 82134223 -117495927 + AluSq SINE Alu 1 304 -9 1664 240 58 61 chr5 82134223 82134266 -117495884 - L1MC4a LINE L1 -299 5822 5780 2166 117 0 7 chr5 82134266 82134566 -117495584 + AluSg SINE Alu 1 298 -12 1664 240 58 61 chr5 82134566 82135077 -117495073 - L1MC4a LINE L1 -341 5780 5254 240 35 0 0 chr5 82135238 82135267 -117494883 + (TG)n Simple_repeat Simple_repeat 2 30 0 188 61 61 0 chr5 82135306 82135339 -117494811 + T-rich Low_complexity Low_complexity 1 35 0 44170 28 21 1 chr5 82135340 82141365 -117488785 - L1HS LINE L1 -1 6154 7 738 312 98 38 chr5 82141368 82142194 -117487956 - L1MC4a LINE L1 -1117 5029 4154 210 234 85 64 chr5 82142422 82142516 -117487634 - L3 LINE CR1 -263 1314 1219 208 193 0 88 chr5 82143686 82143743 -117486407 + L2 LINE L2 3261 3312 -1 547 287 7 14 chr5 82145713 82145856 -117484294 - MER5B DNA MER1_type -4 174 33 2096 119 7 7 chr5 82145856 82146151 -117483999 - AluSx SINE Alu -17 295 1 231 152 22 0 chr5 82146281 82146327 -117483823 + L2 LINE L2 3224 3270 -2 2263 92 3 3 chr5 82146701 82146995 -117483155 - AluSg SINE Alu -16 294 1 549 218 163 7 chr5 82146999 82147146 -117483004 - MER5A DNA MER1_type -6 183 14 2290 98 24 0 chr5 82147865 82148160 -117481990 + AluSx SINE Alu 1 302 -10 269 298 48 0 chr5 82148665 82148749 -117481401 + L2 LINE L2 3185 3272 0 848 212 166 5 chr5 82150569 82150762 -117479388 + MER58A DNA MER1_type 1 224 0 218 268 61 97 chr5 82150864 82151092 -117479058 + MIR SINE MIR 1 220 -42 580 163 252 0 chr5 82152630 82152753 -117477397 + MER3 DNA MER1_type 1 154 -55 438 248 0 20 chr5 82152760 82152861 -117477289 - L2 LINE L2 -5 3308 3210 1312 202 4 4 chr5 82152878 82153126 -117477024 - AluJb SINE Alu -64 248 1 22 0 0 0 chr5 82153311 82153333 -117476817 + AT_rich Low_complexity Low_complexity 1 22 0 293 214 0 0 chr5 82154090 82154146 -117476004 + MER3 DNA MER1_type 153 208 -1 258 250 0 0 chr5 82154104 82154156 -117475994 - MER3 DNA MER1_type -119 90 39 * 259 294 49 56 chr5 82155042 82155185 -117474965 + L2 LINE L2 3127 3268 -4 2070 130 0 3 chr5 82157045 82157345 -117472805 - AluSx SINE Alu -13 299 1 216 0 0 0 chr5 82157633 82157657 -117472493 + (TTG)n Simple_repeat Simple_repeat 2 25 0 473 205 160 60 chr5 82157693 82157893 -117472257 - LTR16C LTR ERVL 0 491 272 434 272 38 59 chr5 82158739 82158904 -117471246 - MIR SINE MIR -59 203 39 436 154 4 11 chr5 82160106 82160340 -117469810 + AluJb SINE Alu 1 297 -15 557 291 154 29 chr5 82160827 82161178 -117468972 + L3 LINE CR1 1182 1576 -1 636 265 60 5 chr5 82162402 82162602 -117467548 - L2 LINE L2 -3 3310 3100 834 175 0 0 chr5 82162624 82162767 -117467383 + FLAM_C SINE Alu 1 143 0 730 291 32 12 chr5 82162786 82163115 -117467035 - L2 LINE L2 -228 3085 2751 340 303 0 10 chr5 82163630 82163729 -117466421 + (TG)n Simple_repeat Simple_repeat 1 98 0 275 297 80 15 chr5 82164619 82164751 -117465399 + MIR SINE MIR 19 151 -63 1824 205 12 0 chr5 82164753 82165075 -117465075 + MSTD LTR MaLR 1 326 -70 102 36 0 0 chr5 82165078 82165215 -117464935 + AT_rich Low_complexity Low_complexity 1 137 0 423 68 0 34 chr5 82165218 82165277 -117464873 + MSTD LTR MaLR 401 457 0 679 215 39 44 chr5 82165282 82165487 -117464663 - L2 LINE L2 -1 3312 3109 233 212 15 61 chr5 82165490 82165556 -117464594 + MIR SINE MIR 168 230 -32 266 277 106 0 chr5 82165728 82165761 -117464389 - HAL1b LINE L1 -29 1319 1287 297 259 144 17 chr5 82165761 82165935 -117464215 - L1ME4a LINE L1 -83 6038 1216 644 246 29 71 chr5 82167099 82167346 -117462804 + MIR SINE MIR 28 261 -1 527 278 46 50 chr5 82168916 82169157 -117460993 + MLT1J LTR MaLR 220 459 -52 3234 228 49 42 chr5 82169161 82170463 -117459687 - L1ME3A LINE L1 -4 6166 4855 891 244 47 22 chr5 82170562 82170836 -117459314 - L1ME4a LINE L1 -266 5855 5575 24 0 0 0 chr5 82170924 82170948 -117459202 + AT_rich Low_complexity Low_complexity 1 24 0 371 118 0 15 chr5 82171988 82172056 -117458094 + (TCTCC)n Simple_repeat Simple_repeat 2 68 0 1261 234 22 89 chr5 82172463 82172834 -117457316 - MLT1I LTR MaLR -4 405 60 547 119 0 79 chr5 82172971 82173072 -117457078 - MER5A DNA MER1_type -88 101 9 253 294 98 37 chr5 82173471 82173634 -117456516 + L1ME3 LINE L1 4776 4948 -1198 928 211 78 37 chr5 82173670 82173912 -117456238 - L1MC4 LINE L1 -221 7821 7570 228 86 0 0 chr5 82173912 82173947 -117456203 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2318 77 11 0 chr5 82173949 82174236 -117455914 - AluSq SINE Alu -23 290 1 676 279 54 9 chr5 82174277 82174499 -117455651 - L1MC4 LINE L1 -457 7585 7354 * 1045 270 106 46 chr5 82174496 82174970 -117455180 + L1ME3 LINE L1 5437 5938 -224 1413 119 5 5 chr5 82175091 82175293 -117454857 - THE1B LTR MaLR 0 364 163 * 1783 124 11 19 chr5 82175288 82175553 -117454597 - THE1B LTR MaLR -101 263 1 1944 153 0 19 chr5 82175584 82175753 -117454397 - AluJo SINE Alu -11 301 139 2022 82 48 38 chr5 82175753 82176045 -117454105 - AluSc SINE Alu -14 295 1 1944 153 0 19 chr5 82176045 82176182 -117453968 - AluJo SINE Alu -173 139 1 25 0 0 0 chr5 82176308 82176333 -117453817 + AT_rich Low_complexity Low_complexity 1 25 0 408 217 83 58 chr5 82176491 82176544 -117453606 - MER94 DNA DNA -1 133 83 2377 124 40 17 chr5 82176544 82176898 -117453252 + THE1B LTR MaLR 3 364 0 408 217 83 58 chr5 82176898 82176964 -117453186 - MER94 DNA DNA -51 83 11 3413 215 76 26 chr5 82177770 82178718 -117451432 - L1ME1 LINE L1 -1 6165 5141 1960 132 34 14 chr5 82178718 82179014 -117451136 - AluJb SINE Alu -10 302 1 3413 215 76 26 chr5 82179014 82179442 -117450708 - L1ME1 LINE L1 -1025 5141 4736 1675 172 20 14 chr5 82179508 82179804 -117450346 - AluJo SINE Alu -14 298 1 348 83 0 0 chr5 82179983 82180031 -117450119 + (TG)n Simple_repeat Simple_repeat 1 48 0 466 150 0 0 chr5 82180235 82180315 -117449835 - L1ME LINE L1 -690 5474 5395 2098 109 0 3 chr5 82181772 82182086 -117448064 - AluSx SINE Alu 0 313 1 685 242 16 0 chr5 82182140 82182268 -117447882 + FRAM SINE Alu 8 137 -39 389 165 0 13 chr5 82182268 82182347 -117447803 + G-rich Low_complexity Low_complexity 1 78 0 * 824 153 17 11 chr5 82182342 82182518 -117447632 + GA-rich Low_complexity Low_complexity 1 177 0 21 0 0 0 chr5 82182589 82182610 -117447540 + AT_rich Low_complexity Low_complexity 1 21 0 467 297 125 44 chr5 82182707 82183067 -117447083 + L2 LINE L2 2589 2977 -337 658 154 98 24 chr5 82183117 82183240 -117446910 + FLAM_C SINE Alu 1 132 -1 301 253 12 24 chr5 82183418 82183501 -117446649 - MER5A DNA MER1_type -21 168 87 303 307 79 10 chr5 82184960 82185162 -117444988 - L1ME4a LINE L1 -251 5870 5655 201 74 0 0 chr5 82187248 82187275 -117442875 + (A)n Simple_repeat Simple_repeat 1 27 0 1304 194 0 0 chr5 82188943 82189159 -117440991 - MLT1A1 LTR MaLR 0 365 150 192 382 0 0 chr5 82189483 82189551 -117440599 + MIR SINE MIR 76 143 -65 300 283 10 10 chr5 82190052 82190151 -117439999 - MER117 DNA MER1_type -28 169 71 736 204 43 19 chr5 82190557 82190719 -117439431 - MER3 DNA MER1_type -81 128 10 762 164 19 122 chr5 82192129 82192206 -117437944 - MIR SINE MIR -43 219 136 2411 64 0 3 chr5 82192206 82192518 -117437632 - AluY SINE Alu 0 311 1 762 164 19 122 chr5 82192518 82192654 -117437496 - MIR SINE MIR -126 136 28 775 134 0 63 chr5 82192803 82192945 -117437205 + FLAM_C SINE Alu 1 133 0 5415 156 12 21 chr5 82192956 82193542 -117436608 - MER49 LTR ERV1 -33 890 313 1836 149 0 0 chr5 82193542 82193830 -117436320 - AluJb SINE Alu -14 298 11 5415 156 12 21 chr5 82193830 82194141 -117436009 - MER49 LTR ERV1 -610 313 1 273 313 50 0 chr5 82194148 82194228 -117435922 - MIR3 SINE MIR -48 160 77 2217 82 0 52 chr5 82195273 82195601 -117434549 - AluY SINE Alu 0 311 1 541 256 178 41 chr5 82195913 82196132 -117434018 + MIR SINE MIR 14 262 0 236 263 105 11 chr5 82197762 82197857 -117432293 + L2 LINE L2 2993 3096 -176 242 365 65 0 chr5 82199149 82199256 -117430894 + L2 LINE L2 3155 3268 -4 517 252 9 0 chr5 82199480 82199587 -117430563 + MER81 DNA DNA 2 109 -5 222 381 56 6 chr5 82199605 82199765 -117430385 - L2 LINE L2 -9 3263 3096 22 56 0 0 chr5 82200868 82200904 -117429246 + AT_rich Low_complexity Low_complexity 1 36 0 295 336 15 15 chr5 82202031 82202162 -117427988 + MER117 DNA MER1_type 67 197 0 275 253 125 60 chr5 82202934 82203091 -117427059 - MIR3 SINE MIR -62 146 3 1994 126 0 10 chr5 82203197 82203490 -117426660 + AluSx SINE Alu 6 295 -17 626 205 56 0 chr5 82203985 82204146 -117426004 + MER5B DNA MER1_type 5 174 -4 1923 60 102 0 chr5 82204605 82204871 -117425279 - AluY SINE Alu -2 309 17 194 304 196 0 chr5 82205293 82205385 -117424765 - L2 LINE L2 -1247 2067 1958 1700 161 7 7 chr5 82205531 82205830 -117424320 + AluSx SINE Alu 1 299 -13 210 37 0 0 chr5 82205888 82205915 -117424235 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 444 249 59 47 chr5 82207787 82207956 -117422194 - MER5B DNA MER1_type -6 172 2 231 393 30 22 chr5 82207987 82208122 -117422028 + L2 LINE L2 3122 3257 -15 21 36 0 0 chr5 82208349 82208377 -117421773 + AT_rich Low_complexity Low_complexity 1 28 0 269 269 0 15 chr5 82208884 82208951 -117421199 + CT-rich Low_complexity Low_complexity 4 69 0 1038 257 124 16 chr5 82209337 82209765 -117420385 - MLT1K LTR MaLR 0 476 3 908 308 88 36 chr5 82209966 82210521 -117419629 - L3 LINE CR1 -175 1402 819 628 239 126 17 chr5 82211812 82212042 -117418108 - MLT1K LTR MaLR -3 585 331 496 231 44 74 chr5 82212088 82212291 -117417859 - MLT1K LTR MaLR -362 226 30 234 288 113 51 chr5 82212291 82212565 -117417585 - L2 LINE L2 -1270 2044 1754 233 319 19 89 chr5 82212834 82213091 -117417059 - L2 LINE L2 -221 3051 2813 2161 107 3 3 chr5 82213544 82213854 -117416296 + AluSx SINE Alu 1 310 -2 272 257 104 77 chr5 82214037 82214220 -117415930 + MER5A DNA MER1_type 1 188 -1 335 320 193 6 chr5 82215114 82215295 -117414855 - MIR SINE MIR 0 262 48 440 262 79 48 chr5 82215316 82215683 -117414467 - MLT1J2 LTR MaLR -7 443 64 375 259 80 0 chr5 82215942 82216054 -117414096 - MIR SINE MIR -65 197 77 1809 202 135 21 chr5 82216685 82216870 -117413280 - L1MDa LINE L1 -3301 3239 3077 2076 87 35 3 chr5 82216870 82217157 -117412993 + AluSq SINE Alu 1 296 -17 1809 202 135 21 chr5 82217157 82217496 -117412654 - L1MDa LINE L1 -3463 3077 2655 637 247 100 82 chr5 82217521 82218071 -117412079 - L1MDa LINE L1 -4039 2501 1942 3451 260 81 23 chr5 82218091 82219850 -117410300 - L1MEc LINE L1 -3321 2808 965 852 324 90 29 chr5 82219902 82220423 -117409727 - L1M4 LINE L1 -1281 4865 4313 376 338 60 30 chr5 82220510 82220776 -117409374 - L1MEc LINE L1 -5198 921 648 243 361 58 13 chr5 82220998 82221153 -117408997 - L1MEc LINE L1 -5712 407 246 195 256 0 0 chr5 82221572 82221615 -117408535 - L2 LINE L2 -13 3259 3217 1541 173 37 3 chr5 82221790 82222085 -117408065 - AluJb SINE Alu -7 305 1 274 256 22 109 chr5 82222270 82222407 -117407743 + MER5B DNA MER1_type 53 177 -1 271 235 0 106 chr5 82222407 82222487 -117407663 + MIR SINE MIR 75 145 -117 1169 236 16 12 chr5 82223063 82223309 -117406841 + MIR SINE MIR 3 249 -13 2302 176 81 5 chr5 82224394 82224825 -117405325 - MLT1C LTR MaLR -3 464 1 296 350 207 12 chr5 82224964 82225210 -117404940 - L2 LINE L2 -468 2846 2553 1853 179 59 65 chr5 82225549 82225847 -117404303 - MLT1D LTR MaLR 0 505 210 2156 94 7 0 chr5 82225847 82226133 -117404017 - AluSx SINE Alu -18 294 7 1853 179 59 65 chr5 82226133 82226342 -117403808 - MLT1D LTR MaLR -295 210 1 643 299 43 5 chr5 82229225 82229432 -117400718 - MIR SINE MIR -1 261 47 327 322 178 0 chr5 82229443 82229645 -117400505 - MIR SINE MIR 0 262 25 533 259 184 24 chr5 82230702 82230957 -117399193 - L2 LINE L2 0 3272 2977 718 288 48 28 chr5 82230975 82231333 -117398817 + LTR16B LTR ERVL 1 365 -99 22 0 0 0 chr5 82231938 82231960 -117398190 + AT_rich Low_complexity Low_complexity 1 22 0 769 306 79 41 chr5 82232441 82232833 -117397317 + L2 LINE L2 2866 3272 0 330 26 0 0 chr5 82233694 82233733 -117396417 + (TG)n Simple_repeat Simple_repeat 2 40 0 994 87 0 0 chr5 82233733 82233859 -117396291 - AluSq/x SINE Alu -187 126 1 302 335 137 22 chr5 82233919 82234241 -117395909 - L2 LINE L2 -5 3308 2950 226 264 57 0 chr5 82234914 82234967 -117395183 + MIR SINE MIR 105 160 -102 473 284 81 96 chr5 82235861 82236154 -117393996 - L2 LINE L2 -596 2718 2422 3290 32 0 11 chr5 82236154 82236533 -117393617 - L1PA5 LINE L1 -7 6147 5773 473 284 81 96 chr5 82236533 82236830 -117393320 - L2 LINE L2 -892 2422 2080 274 341 0 0 chr5 82237581 82237669 -117392481 - MIR SINE MIR -84 124 37 366 295 39 51 chr5 82237770 82237926 -117392224 + L2 LINE L2 1868 2021 -1293 2275 87 3 0 chr5 82237965 82238251 -117391899 + AluSg SINE Alu 16 302 -8 289 298 24 12 chr5 82238560 82238644 -117391506 - LTR67 LTR ERVL -363 194 110 503 293 176 70 chr5 82238776 82239400 -117390750 + L2 LINE L2 2080 2769 -545 2578 169 43 31 chr5 82239511 82240021 -117390129 - L1M4c LINE L1 -5767 617 102 480 279 94 21 chr5 82240021 82240254 -117389896 + L1MC4 LINE L1 7793 8042 0 332 344 73 46 chr5 82240399 82240658 -117389492 - L2 LINE L2 -493 2821 2556 591 338 57 14 chr5 82241343 82241639 -117388511 - L2 LINE L2 -788 2526 2218 211 154 0 0 chr5 82241894 82241933 -117388217 + L2 LINE L2 3275 3313 0 184 143 0 0 chr5 82243003 82243031 -117387119 + L2 LINE L2 3231 3258 -14 1522 267 60 74 chr5 82244203 82244904 -117385246 + MER21B LTR ERV1 24 714 -149 960 287 76 36 chr5 82245297 82245718 -117384432 + MER115 DNA AcHobo 4 441 -252 917 147 103 0 chr5 82246180 82246364 -117383786 + MER33 DNA MER1_type 46 248 -76 682 267 68 0 chr5 82246368 82246529 -117383621 - FAM SINE Alu -3 172 1 478 187 11 0 chr5 82247565 82247656 -117382494 + MER33 DNA MER1_type 233 324 0 1433 198 8 0 chr5 82248212 82248449 -117381701 + MER8 DNA MER2_type 1 239 0 182 163 75 100 chr5 82248460 82248540 -117381610 - MIR SINE MIR -78 184 107 446 194 103 84 chr5 82248592 82248725 -117381425 - L2 LINE L2 0 3313 3175 2724 228 45 34 chr5 82248725 82249344 -117380806 + MLT1E2 LTR MaLR 1 626 0 446 194 103 84 chr5 82249344 82249365 -117380785 - L2 LINE L2 -138 3175 3156 265 314 8 8 chr5 82249368 82249486 -117380664 - LTR33A LTR ERVL -2 521 404 1089 254 116 6 chr5 82249500 82249819 -117380331 + MLT1H LTR MaLR 1 354 -195 261 260 58 91 chr5 82250227 82250381 -117379769 - LTR50 LTR ERVL -619 176 28 4614 129 75 49 chr5 82251064 82251934 -117378216 - MER4D LTR ERV1 -11 892 1 21 36 0 0 chr5 82252646 82252674 -117377476 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 82252724 82252754 -117377396 + AT_rich Low_complexity Low_complexity 1 30 0 3684 111 17 9 chr5 82252754 82253288 -117376862 - L1MA3 LINE L1 0 6305 5768 519 17 0 0 chr5 82253352 82253412 -117376738 + (CA)n Simple_repeat Simple_repeat 2 61 0 331 225 21 89 chr5 82253697 82253863 -117376287 + L1M4 LINE L1 1516 1820 -4872 * 572 155 112 126 chr5 82253861 82253958 -117376192 - L1M4 LINE L1 -1476 4670 4573 1636 166 0 21 chr5 82253958 82254276 -117375874 - AluJb SINE Alu 0 312 11 572 155 112 126 chr5 82254276 82254384 -117375766 - L1M4 LINE L1 -1573 4573 4468 281 233 0 56 chr5 82254419 82254509 -117375641 + L1ME3 LINE L1 5734 5818 -303 825 254 64 50 chr5 82254906 82255327 -117374823 + HAL1b LINE L1 140 566 -782 939 274 79 12 chr5 82255461 82255790 -117374360 + HAL1b LINE L1 551 901 -447 978 133 7 0 chr5 82255800 82255935 -117374215 + AluSq/x SINE Alu 1 136 -177 407 240 39 19 chr5 82255969 82256123 -117374027 + HAL1b LINE L1 938 1094 -254 577 270 67 85 chr5 82256128 82256469 -117373681 + L1ME3 LINE L1 5825 6159 -3 6445 80 11 0 chr5 82256513 82257354 -117372796 - L1PA11 LINE L1 -2 6172 5323 621 168 61 51 chr5 82257372 82257568 -117372582 + HAL1b LINE L1 1140 1337 -11 22 0 0 0 chr5 82257574 82257596 -117372554 + AT_rich Low_complexity Low_complexity 1 22 0 2012 145 0 0 chr5 82257661 82257944 -117372206 + AluSx SINE Alu 1 283 -29 262 130 25 222 chr5 82258071 82258233 -117371917 + L1ME4a LINE L1 5990 6119 -2 1127 156 0 40 chr5 82258555 82258754 -117371396 + AluJo SINE Alu 101 291 -21 226 208 52 39 chr5 82258788 82258865 -117371285 + L1ME LINE L1 5745 5822 -299 45473 37 1 1 chr5 82258872 82264376 -117365774 + L1P1 LINE L1 1 5500 -655 3629 149 41 69 chr5 82264515 82265226 -117364924 + LTR8 LTR ERV1 1 691 0 914 187 136 5 chr5 82265958 82266156 -117363994 - MER58A DNA MER1_type 0 224 1 254 182 146 55 chr5 82266174 82266284 -117363866 + L1M LINE L1 5298 5417 -880 556 279 60 6 chr5 82268422 82268605 -117361545 - MER117 DNA MER1_type -3 194 2 342 0 0 0 chr5 82269170 82269208 -117360942 + (TGAA)n Simple_repeat Simple_repeat 2 39 0 2081 150 31 13 chr5 82269934 82270288 -117359862 + MLT1A1 LTR MaLR 1 365 0 2959 136 14 0 chr5 82270564 82270992 -117359158 + MER57B LTR ERV1 1 434 0 215 351 13 0 chr5 82271718 82271795 -117358355 + MIR SINE MIR 23 100 -108 314 324 9 19 chr5 82272753 82272861 -117357289 - MIR SINE MIR -109 153 47 203 0 0 36 chr5 82274065 82274093 -117356057 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 659 307 114 9 chr5 82275979 82276295 -117353855 + L2 LINE L2 1964 2312 -1002 328 291 188 55 chr5 82276310 82276567 -117353583 + L2 LINE L2 2440 2753 -561 2100 92 3 51 chr5 82276567 82276883 -117353267 + AluSx SINE Alu 1 302 0 328 291 188 55 chr5 82276883 82276954 -117353196 + L2 LINE L2 2753 2813 -501 288 351 24 18 chr5 82277009 82277174 -117352976 + L2 LINE L2 2936 3101 -171 264 164 45 15 chr5 82277391 82277458 -117352692 - MLT1K LTR MaLR -332 256 188 446 207 41 58 chr5 82277712 82277833 -117352317 - L2 LINE L2 0 3313 3195 1111 230 18 5 chr5 82278197 82278419 -117351731 + MIR SINE MIR 1 225 -37 629 283 105 33 chr5 82278441 82278802 -117351348 - L2 LINE L2 -835 2479 2093 269 387 61 14 chr5 82279104 82279316 -117350834 - L2 LINE L2 -494 2820 2599 3390 246 124 15 chr5 82280133 82281515 -117348635 + L2 LINE L2 1798 3310 -3 292 289 72 65 chr5 82282672 82282949 -117347201 - L3 LINE CR1 -733 844 566 2202 125 0 0 chr5 82283051 82283354 -117346796 + AluSx SINE Alu 1 303 -9 313 266 119 0 chr5 82283689 82283798 -117346352 - L2 LINE L2 0 3272 3151 212 308 0 0 chr5 82283886 82283938 -117346212 - MIR SINE MIR -62 146 95 382 332 64 16 chr5 82283949 82284199 -117345951 + L1ME2 LINE L1 5332 5593 -2215 534 242 123 16 chr5 82284213 82284465 -117345685 + L1ME2 LINE L1 5732 6010 -111 320 272 19 0 chr5 82285116 82285219 -117344931 + L2 LINE L2 2808 2912 -401 275 143 0 0 chr5 82287183 82287232 -117342918 + L1ME2 LINE L1 6116 6164 0 2155 88 0 85 chr5 82287635 82287964 -117342186 + AluSq SINE Alu 1 301 -12 2217 115 0 3 chr5 82289683 82289987 -117340163 + AluSq SINE Alu 1 303 -10 554 178 92 26 chr5 82289987 82290139 -117340011 - MER103 DNA DNA -3 163 2 334 210 25 0 chr5 82291352 82291433 -117338717 - L1MD1 LINE L1 -15 6227 6145 2288 97 0 7 chr5 82292265 82292564 -117337586 + AluSq SINE Alu 1 297 -16 64 14 0 0 chr5 82293114 82293185 -117336965 + AT_rich Low_complexity Low_complexity 1 71 0 201 39 0 0 chr5 82293496 82293522 -117336628 + (CA)n Simple_repeat Simple_repeat 2 27 0 524 296 46 31 chr5 82295522 82295718 -117334432 - MIR SINE MIR -56 206 8 2409 77 0 0 chr5 82296347 82296657 -117333493 - AluY SINE Alu -1 310 1 327 352 48 14 chr5 82297470 82297615 -117332535 - MER5A DNA MER1_type -38 151 2 2285 105 3 3 chr5 82298534 82298838 -117331312 + AluSq SINE Alu 1 304 -9 2216 116 3 3 chr5 82299182 82299492 -117330658 - AluSq SINE Alu -3 310 1 529 186 0 0 chr5 82300186 82300272 -117329878 + L2 LINE L2 3228 3313 0 201 293 35 0 chr5 82300778 82300836 -117329314 + MIR SINE MIR 193 252 -10 26 0 0 0 chr5 82301453 82301479 -117328671 + AT_rich Low_complexity Low_complexity 1 26 0 193 200 0 0 chr5 82302974 82303009 -117327141 + L2 LINE L2 3222 3256 -16 931 202 23 0 chr5 82303327 82303500 -117326650 + MER45A DNA AcHobo 2 178 0 310 342 67 17 chr5 82303991 82304111 -117326039 - L2 LINE L2 -15 3257 3132 287 348 70 9 chr5 82305315 82305430 -117324720 + MIR SINE MIR 19 140 -68 596 309 87 52 chr5 82305483 82305735 -117324415 - MIR SINE MIR 0 262 2 1346 145 47 9 chr5 82305927 82306141 -117324009 + AluJb SINE Alu 20 241 -71 1889 131 6 42 chr5 82307218 82307530 -117322620 + AluSx SINE Alu 1 301 -11 1673 229 79 42 chr5 82308267 82308754 -117321396 + L1MDa LINE L1 2267 2735 -3805 189 107 0 0 chr5 82308754 82308782 -117321368 + (TG)n Simple_repeat Simple_repeat 2 29 0 1673 229 79 42 chr5 82308782 82309339 -117320811 + L1MDa LINE L1 2735 3356 -3184 541 142 55 8 chr5 82309339 82309466 -117320684 + L1M4 LINE L1 5183 5315 -831 1983 149 138 5 chr5 82309508 82309884 -117320266 + MSTA LTR MaLR 1 426 -2 494 222 140 0 chr5 82309939 82310110 -117320040 + L1MD2 LINE L1 6163 6357 -2 21 0 0 0 chr5 82311503 82311524 -117318626 + AT_rich Low_complexity Low_complexity 1 21 0 200 222 0 0 chr5 82314119 82314164 -117315986 + A-rich Low_complexity Low_complexity 1 45 0 204 321 0 24 chr5 82314688 82314772 -117315378 + GA-rich Low_complexity Low_complexity 1 82 0 2330 110 0 0 chr5 82316103 82316413 -117313737 - AluSx SINE Alu -2 310 1 233 287 139 31 chr5 82316894 82317023 -117313127 + MIR3 SINE MIR 6 148 -60 2434 86 0 3 chr5 82317138 82317440 -117312710 - AluSc SINE Alu -8 301 1 1821 101 98 49 chr5 82317583 82317930 -117312220 + THE1B LTR MaLR 1 364 0 771 207 0 0 chr5 82318123 82318273 -117311877 + L1PB4 LINE L1 6005 6154 -2 639 241 0 8 chr5 82318305 82318438 -117311712 - L2 LINE L2 -1 3312 3181 385 148 0 37 chr5 82319671 82319752 -117310398 - MER53 DNA DNA 0 189 112 567 75 0 25 chr5 82319788 82319868 -117310282 - Alu SINE Alu -12 300 223 1062 146 61 33 chr5 82320018 82320231 -117309919 - MER20 DNA MER1_type 0 219 1 1388 156 40 40 chr5 82321226 82321476 -117308674 + AluJo SINE Alu 1 250 -62 256 308 0 0 chr5 82321553 82321618 -117308532 + L2 LINE L2 2754 2818 -496 237 200 24 164 chr5 82321683 82321848 -117308302 - MLT1J LTR MaLR -44 467 326 877 265 10 8 chr5 82321962 82322277 -117307873 - LTR16A LTR ERVL 0 450 97 2294 113 48 20 chr5 82322349 82322703 -117307447 + THE1B LTR MaLR 1 364 0 287 234 65 37 chr5 82322710 82322817 -117307333 - MLT1J LTR MaLR -328 183 74 186 133 0 0 chr5 82323252 82323282 -117306868 + (A)n Simple_repeat Simple_repeat 1 30 0 705 124 0 16 chr5 82323396 82323517 -117306633 + L1PA15 LINE L1 6044 6162 -3 22 35 0 0 chr5 82323517 82323546 -117306604 + AT_rich Low_complexity Low_complexity 1 29 0 277 128 11 170 chr5 82323931 82324025 -117306125 + MER69 DNA AcHobo 1 79 -2447 2141 109 3 0 chr5 82324489 82324814 -117305336 - AluSx SINE Alu 0 326 1 766 270 66 21 chr5 82325011 82325252 -117304898 + MIR SINE MIR 5 256 -6 229 250 17 17 chr5 82326192 82326252 -117303898 + MIR SINE MIR 16 75 -133 24 0 0 0 chr5 82328831 82328855 -117301295 + AT_rich Low_complexity Low_complexity 1 24 0 779 270 90 43 chr5 82329093 82329764 -117300386 - L1MEd LINE L1 -4640 1670 891 2425 98 0 0 chr5 82329764 82330069 -117300081 - AluSq SINE Alu -8 305 1 779 270 90 43 chr5 82330069 82330400 -117299750 - L1MEd LINE L1 -5419 891 577 478 304 52 48 chr5 82330514 82330972 -117299178 + L1MC4 LINE L1 7443 7902 -140 2268 67 3 7 chr5 82331567 82331885 -117298265 + AluY SINE Alu 2 318 0 21 0 0 0 chr5 82332289 82332310 -117297840 + AT_rich Low_complexity Low_complexity 1 21 0 412 200 0 0 chr5 82332518 82332588 -117297562 + Charlie1 DNA MER1_type 1 70 -2691 * 968 172 81 0 chr5 82332587 82332796 -117297354 + Charlie1 DNA MER1_type 2343 2568 -193 1054 191 78 99 chr5 82332897 82333191 -117296959 - AluJo SINE Alu -14 288 1 513 345 80 45 chr5 82333285 82333734 -117296416 - L1MEd LINE L1 -5645 474 10 1605 165 44 92 chr5 82334980 82335434 -117294716 - MSTB1 LTR MaLR 0 432 1 306 296 72 75 chr5 82335466 82335704 -117294446 - MIR SINE MIR -28 234 6 465 145 99 105 chr5 82335821 82335973 -117294177 - MIR SINE MIR -89 173 23 389 282 107 27 chr5 82336252 82336401 -117293749 + MIR SINE MIR 2 162 -100 1290 203 136 3 chr5 82337853 82338154 -117291996 - MER58B DNA MER1_type 0 341 1 671 238 16 42 chr5 82338574 82338767 -117291383 + MLT1L LTR MaLR 207 394 -221 1870 158 16 10 chr5 82338990 82339300 -117290850 + AluJb SINE Alu 1 312 0 615 196 0 0 chr5 82339448 82339555 -117290595 + FLAM_A SINE Alu 1 107 -35 2440 98 0 0 chr5 82339831 82340138 -117290012 - AluSx SINE Alu -5 307 1 258 0 0 0 chr5 82340511 82340540 -117289610 + AluYa5 SINE Alu 163 191 -110 2354 57 7 34 chr5 82341057 82341355 -117288795 + AluY SINE Alu 1 290 -21 618 249 5 22 chr5 82341572 82341757 -117288393 - AluJb SINE Alu -1 311 130 2102 126 3 3 chr5 82341762 82342056 -117288094 - AluSx SINE Alu -18 294 1 251 221 126 21 chr5 82342196 82342291 -117287859 - HAL1 LINE L1 -1616 891 787 320 280 84 74 chr5 82342392 82342684 -117287466 - L1ME LINE L1 -319 5802 5503 1630 172 39 0 chr5 82342684 82342963 -117287187 - AluJb SINE Alu -22 290 1 320 280 84 74 chr5 82342963 82343088 -117287062 - L1ME LINE L1 -618 5503 5381 2137 135 3 0 chr5 82343105 82343401 -117286749 + AluSx SINE Alu 1 297 -15 556 199 6 77 chr5 82343730 82343886 -117286264 + MIR SINE MIR 66 210 -52 1035 163 0 24 chr5 82343897 82344063 -117286087 - FRAM SINE Alu -19 157 1 397 296 42 0 chr5 82344122 82344264 -117285886 + L3 LINE CR1 1374 1521 -56 2388 92 0 13 chr5 82344473 82344787 -117285363 - AluSg SINE Alu 0 310 1 1815 148 21 7 chr5 82345164 82345455 -117284695 - AluJo SINE Alu -17 295 1 466 256 139 10 chr5 82345577 82345904 -117284246 - LTR16C LTR ERVL -13 478 83 249 248 89 40 chr5 82346076 82346177 -117283973 + MER91A DNA MER1_type 18 123 -73 2099 148 0 0 chr5 82346401 82346704 -117283446 - AluJb SINE Alu -1 311 9 463 315 19 6 chr5 82346829 82346991 -117283159 + MIR3 SINE MIR 45 208 0 821 242 142 78 chr5 82347045 82347310 -117282840 - MLT1J LTR MaLR -10 501 194 2014 100 93 0 chr5 82347310 82347580 -117282570 + AluSc SINE Alu 1 295 -14 821 242 142 78 chr5 82347580 82347764 -117282386 - MLT1J LTR MaLR -317 194 23 2757 159 34 47 chr5 82348214 82348748 -117281402 - MER68 LTR ERV1 -35 527 1 4080 96 85 19 chr5 82348948 82349574 -117280576 - PABL_B LTR ERV1 0 667 1 321 279 39 10 chr5 82349734 82349838 -117280312 - Charlie8 DNA MER1_type -2226 191 85 2001 135 21 0 chr5 82350117 82350406 -117279744 - AluSx SINE Alu -17 295 1 305 258 0 0 chr5 82350538 82350604 -117279546 + L2 LINE L2 3207 3272 0 1596 171 20 20 chr5 82350834 82351127 -117279023 - AluJo SINE Alu -19 293 1 2186 90 0 3 chr5 82351215 82351503 -117278647 - AluSc SINE Alu -4 305 19 2348 63 0 7 chr5 82351945 82352252 -117277898 + AluY SINE Alu 1 305 0 945 127 0 0 chr5 82352644 82352770 -117277380 + FLAM_C SINE Alu 1 126 -17 1516 196 132 22 chr5 82353007 82353364 -117276786 - MSTD LTR MaLR 0 396 1 823 187 128 32 chr5 82353987 82354174 -117275976 - MER63A DNA MER1_type 0 210 6 2101 128 3 3 chr5 82354302 82354607 -117275543 + AluSx SINE Alu 5 309 -3 281 250 97 69 chr5 82354950 82355094 -117275056 + AluYa8 SINE Alu 134 281 -19 476 184 35 0 chr5 82356080 82356167 -117273983 - Tigger5 DNA MER2_type 0 2323 2234 1479 164 12 20 chr5 82356326 82356576 -117273574 - AluJb SINE Alu -28 284 37 416 181 12 24 chr5 82357412 82357495 -117272655 - Tigger5 DNA MER2_type 0 2323 2242 261 0 0 0 chr5 82357495 82357524 -117272626 + (TA)n Simple_repeat Simple_repeat 2 30 0 1759 77 0 9 chr5 82357524 82357746 -117272404 - AluY SINE Alu -9 302 83 343 161 0 18 chr5 82357766 82357822 -117272328 - Tigger5 DNA MER2_type -2268 55 1 1369 144 179 22 chr5 82358242 82358443 -117271707 - MLT1A1 LTR MaLR 0 365 197 1821 150 0 53 chr5 82358443 82358763 -117271387 - AluJb SINE Alu -9 303 1 1369 144 179 22 chr5 82358763 82358873 -117271277 - MLT1A1 LTR MaLR -168 197 5 567 259 40 50 chr5 82358900 82359101 -117271049 + MIR SINE MIR 13 211 -51 226 290 0 0 chr5 82359632 82359694 -117270456 - MER5A DNA MER1_type -10 179 118 * 251 285 66 58 chr5 82359641 82359778 -117270372 + MER5A DNA MER1_type 30 167 -22 492 288 71 5 chr5 82359832 82360030 -117270120 + MIR SINE MIR 2 212 -50 749 294 112 14 chr5 82360047 82360394 -117269756 + MLT1J2 LTR MaLR 5 385 -65 1969 107 34 10 chr5 82360437 82360728 -117269422 + AluSx SINE Alu 1 298 -14 352 58 39 0 chr5 82360733 82360785 -117269365 - MSTA LTR MaLR -17 411 358 2263 108 7 0 chr5 82360791 82361086 -117269064 - AluSp SINE Alu -16 297 1 1162 184 138 69 chr5 82361118 82361465 -117268685 - MSTA LTR MaLR -57 371 1 2433 143 57 5 chr5 82361505 82361910 -117268240 - MSTB LTR MaLR 0 426 1 2734 86 121 0 chr5 82362057 82362453 -117267697 - MLT2A1 LTR ERVL 0 444 1 2091 202 86 25 chr5 82362464 82362978 -117267172 + MLT1E3 LTR MaLR 80 624 0 1587 170 0 82 chr5 82363003 82363320 -117266830 - AluJo SINE Alu -21 291 1 2201 174 48 3 chr5 82363917 82364392 -117265758 + MER89 LTR ERV1 1 559 0 773 146 0 76 chr5 82367401 82367545 -117262605 - AluJo SINE Alu -177 135 3 28 29 0 0 chr5 82367545 82367580 -117262570 + AT_rich Low_complexity Low_complexity 1 35 0 1195 260 90 6 chr5 82367870 82368193 -117261957 + MLT1I LTR MaLR 59 408 -1 30 45 0 0 chr5 82368280 82368324 -117261826 + AT_rich Low_complexity Low_complexity 1 44 0 27 49 0 0 chr5 82368601 82368642 -117261508 + AT_rich Low_complexity Low_complexity 1 41 0 325 211 22 33 chr5 82368831 82368934 -117261216 - L1MC5 LINE L1 -1124 6918 6738 217 260 0 0 chr5 82369366 82369416 -117260734 + MIR SINE MIR 213 262 0 1720 177 0 31 chr5 82369944 82370261 -117259889 - AluJo SINE Alu -4 308 2 397 246 106 41 chr5 82370378 82370619 -117259531 - L1ME LINE L1 -375 5746 5494 2377 88 3 0 chr5 82370751 82371048 -117259102 + AluSq SINE Alu 1 298 -15 301 231 297 0 chr5 82371072 82371163 -117258987 + FLAM_A SINE Alu 1 118 -15 1029 273 53 65 chr5 82371434 82371742 -117258408 - L2 LINE L2 0 3313 3004 2697 97 11 0 chr5 82371742 82372102 -117258048 + THE1B LTR MaLR 1 364 0 1029 273 53 65 chr5 82372102 82372364 -117257786 - L2 LINE L2 -309 3004 2740 647 256 85 69 chr5 82372364 82372859 -117257291 + MLT1G1 LTR MaLR 1 527 -22 485 213 49 39 chr5 82373052 82373265 -117256885 + LTR23 LTR ERV1 242 445 0 1057 147 0 0 chr5 82373268 82373418 -117256732 - AluJo SINE Alu -162 150 1 2001 146 130 3 chr5 82373589 82373966 -117256184 + MSTA LTR MaLR 3 427 -1 246 285 151 21 chr5 82374009 82374195 -117255955 + MLT1G1-int LTR MaLR 332 541 -830 3535 146 28 75 chr5 82374309 82374857 -117255293 - LTR8 LTR ERV1 0 691 184 2336 108 0 0 chr5 82374857 82375163 -117254987 + AluSx SINE Alu 1 306 -6 3535 146 28 75 chr5 82375163 82375338 -117254812 - LTR8 LTR ERV1 -507 184 2 1462 160 118 8 chr5 82375726 82375988 -117254162 - AluSg SINE Alu -19 291 1 616 246 33 33 chr5 82376620 82376803 -117253347 - LTR33A LTR ERVL -29 494 312 241 183 84 42 chr5 82377132 82377203 -117252947 + MER5B DNA MER1_type 105 178 0 575 191 7 68 chr5 82378666 82378813 -117251337 - FRAM SINE Alu -44 132 1 253 200 33 50 chr5 82378968 82379028 -117251122 - AluJ/FLAM SINE Alu -243 59 1 5870 179 40 60 chr5 82379040 82379200 -117250950 - L1 LINE L1 -1665 4481 4319 1825 139 3 55 chr5 82379200 82379509 -117250641 - AluSx SINE Alu -19 293 1 5870 179 40 60 chr5 82379509 82380709 -117249441 - L1 LINE L1 -1827 4319 3149 1524 146 15 34 chr5 82380709 82381012 -117249138 - AluJb SINE Alu 0 320 23 5870 179 40 60 chr5 82381012 82381155 -117248995 - L1 LINE L1 -2997 3149 3005 2207 125 3 0 chr5 82382097 82382409 -117247741 - AluSp SINE Alu 0 313 1 220 282 26 13 chr5 82382986 82383064 -117247086 + MIR3 SINE MIR 115 193 -15 2382 83 0 26 chr5 82383213 82383525 -117246625 + AluSx SINE Alu 1 304 -8 514 212 62 0 chr5 82383555 82383668 -117246482 + FLAM_A SINE Alu 1 120 -13 363 263 129 27 chr5 82384557 82384743 -117245407 + LTR16A LTR ERVL 245 449 -1 344 267 93 23 chr5 82384795 82384967 -117245183 - MIR SINE MIR -54 208 25 2498 84 3 0 chr5 82385149 82385459 -117244691 - AluSp SINE Alu -2 311 1 1011 148 0 0 chr5 82385513 82385662 -117244488 + FRAM SINE Alu 23 171 -5 361 141 0 31 chr5 82386414 82386478 -117243672 - AluJ/FLAM SINE Alu -240 62 1 387 226 78 0 chr5 82386877 82386979 -117243171 + L2 LINE L2 3200 3309 -4 653 187 49 0 chr5 82387035 82387158 -117242992 - FLAM_C SINE Alu -4 129 1 2297 119 0 0 chr5 82387961 82388272 -117241878 + AluSx SINE Alu 1 311 -1 1647 146 95 3 chr5 82389784 82390100 -117240050 + L1PA16 LINE L1 5821 6165 -1 432 255 123 66 chr5 82391677 82392010 -117238140 - L1ME4a LINE L1 -6 6115 5764 829 300 45 28 chr5 82393199 82393622 -117236528 - L1ME4a LINE L1 -422 5699 5270 280 200 0 0 chr5 82393996 82394051 -117236099 - LTR50 LTR ERVL -111 684 630 2092 99 0 25 chr5 82395445 82395727 -117234423 + AluSx SINE Alu 23 297 -15 231 306 54 27 chr5 82396928 82397039 -117233111 + L2 LINE L2 3134 3247 -25 27 39 0 19 chr5 82397150 82397167 -117232983 + AT_rich Low_complexity Low_complexity 1 17 -34 1921 152 0 7 chr5 82397167 82397464 -117232686 - AluSx SINE Alu -17 295 1 27 39 0 19 chr5 82397464 82397498 -117232652 + AT_rich Low_complexity Low_complexity 17 51 0 345 318 45 0 chr5 82397681 82397813 -117232337 + MIR SINE MIR 52 189 -73 2463 84 0 0 chr5 82398271 82398570 -117231580 - AluSp SINE Alu -14 299 1 1470 290 105 101 chr5 82399048 82400265 -117229885 + L3 LINE CR1 46 1273 -304 1567 161 12 71 chr5 82400265 82400393 -117229757 + AluJo SINE Alu 1 135 -177 2072 96 0 44 chr5 82400393 82400686 -117229464 - AluSg SINE Alu -30 280 1 1567 161 12 71 chr5 82400686 82400879 -117229271 + AluJo SINE Alu 135 303 -9 1470 290 105 101 chr5 82400879 82401151 -117228999 + L3 LINE CR1 1273 1542 -35 297 0 0 0 chr5 82401374 82401407 -117228743 + (TG)n Simple_repeat Simple_repeat 2 34 0 732 81 0 105 chr5 82402110 82402234 -117227916 - AluSg/x SINE Alu -133 179 69 3224 150 24 97 chr5 82402892 82403637 -117226513 - LTR8 LTR ERV1 0 691 1 182 293 17 17 chr5 82404484 82404542 -117225608 - L2 LINE L2 -5 3267 3210 261 83 42 0 chr5 82405028 82405076 -117225074 - L1MA4A LINE L1 -3 6300 6251 22 0 0 0 chr5 82405219 82405241 -117224909 + AT_rich Low_complexity Low_complexity 1 22 0 199 222 73 51 chr5 82405624 82405710 -117224440 - MIR SINE MIR -65 143 58 675 251 91 104 chr5 82405745 82406303 -117223847 - L1ME4a LINE L1 -13 6108 5558 972 78 0 0 chr5 82406460 82406576 -117223574 - AluSg SINE Alu -165 145 30 221 0 0 33 chr5 82406812 82406842 -117223308 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1903 149 9 37 chr5 82406886 82407060 -117223090 - AluJo SINE Alu 0 312 150 2433 97 0 0 chr5 82407060 82407360 -117222790 - AluSg SINE Alu -10 300 1 1903 149 9 37 chr5 82407360 82407506 -117222644 - AluJo SINE Alu -162 150 1 190 213 43 0 chr5 82407516 82407563 -117222587 + L3b LINE CR1 1378 1426 -157 294 280 116 48 chr5 82407653 82407781 -117222369 + MIR SINE MIR 51 198 -64 2037 157 0 0 chr5 82407781 82408087 -117222063 + AluJb SINE Alu 1 306 -6 294 280 116 48 chr5 82408087 82408147 -117222003 + MIR SINE MIR 198 252 -10 254 281 150 44 chr5 82408218 82408378 -117221772 + L2 LINE L2 3124 3300 -13 317 235 60 115 chr5 82408868 82409051 -117221099 + MER5B DNA MER1_type 1 173 -5 189 329 25 13 chr5 82410135 82410214 -117219936 - L2 LINE L2 -45 3227 3148 2336 91 7 0 chr5 82411791 82412088 -117218062 + AluSg SINE Alu 1 299 -11 1758 148 32 0 chr5 82413230 82413513 -117216637 + AluJb SINE Alu 12 303 -9 7232 54 16 19 chr5 82415274 82416350 -117213800 - L1PA5 LINE L1 -1 6153 5082 412 318 78 56 chr5 82416592 82417195 -117212955 + L1MEd LINE L1 122 737 -5382 1392 137 0 32 chr5 82417273 82417492 -117212658 + AluJb SINE Alu 90 301 -11 680 273 115 22 chr5 82417500 82417856 -117212294 + L1MEd LINE L1 868 1256 -4863 1987 61 0 12 chr5 82418611 82418857 -117211293 + AluY SINE Alu 60 302 -9 487 170 9 45 chr5 82419078 82419190 -117210960 - MIR SINE MIR -50 212 105 984 158 12 18 chr5 82419201 82419366 -117210784 + FRAM SINE Alu 2 165 -11 1472 113 24 16 chr5 82419822 82420069 -117210081 + L1MA9 LINE L1 6062 6310 -2 22 80 0 0 chr5 82420069 82420119 -117210031 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr5 82420131 82420155 -117209995 + AT_rich Low_complexity Low_complexity 1 24 0 372 43 0 0 chr5 82424387 82424433 -117205717 + (CA)n Simple_repeat Simple_repeat 2 47 0 550 245 129 27 chr5 82424531 82424678 -117205472 + MER63A DNA MER1_type 49 210 0 2423 89 0 3 chr5 82426120 82426424 -117203726 - AluY SINE Alu -8 303 1 727 294 40 4 chr5 82426627 82426875 -117203275 + MIR SINE MIR 3 259 -3 1876 99 44 0 chr5 82427367 82427619 -117202531 - AluSx SINE Alu -15 297 35 1325 190 89 37 chr5 82427665 82427991 -117202159 + MER2 DNA MER2_type 2 344 0 345 318 61 7 chr5 82427991 82428139 -117202011 + MIR SINE MIR 75 230 -32 746 170 46 13 chr5 82429104 82429257 -117200893 - MIR SINE MIR -71 191 34 281 198 9 164 chr5 82430187 82430303 -117199847 - Charlie8 DNA MER1_type -2 2415 231 360 272 92 57 chr5 82431041 82431269 -117198881 - MIR SINE MIR -14 248 13 229 267 27 13 chr5 82431289 82431364 -117198786 - MIR SINE MIR -111 151 76 2297 97 3 0 chr5 82433250 82433548 -117196602 - AluSg SINE Alu -11 299 1 1135 232 133 23 chr5 82433945 82434624 -117195526 - MER20B DNA MER1_type -5 778 1 184 282 155 19 chr5 82434864 82434967 -117195183 - L2 LINE L2 -83 3189 3073 1927 179 0 58 chr5 82436048 82436161 -117193989 - MLT1A2 LTR MaLR 0 374 256 2663 158 29 5 chr5 82436161 82436605 -117193545 - MSTB2 LTR MaLR -2 455 1 1927 179 0 58 chr5 82436605 82436888 -117193262 - MLT1A2 LTR MaLR -118 256 1 2100 99 0 25 chr5 82438160 82438442 -117191708 + AluSx SINE Alu 23 297 -15 335 68 0 0 chr5 82439023 82439067 -117191083 - AluSx SINE Alu -256 44 1 2197 112 0 32 chr5 82439504 82439816 -117190334 + AluSx SINE Alu 1 302 -10 2382 82 3 3 chr5 82440633 82440936 -117189214 + AluSg SINE Alu 1 303 -7 1454 152 0 17 chr5 82441234 82441465 -117188685 + AluJo SINE Alu 1 227 -85 646 156 9 0 chr5 82441465 82441574 -117188576 + AluJb SINE Alu 190 299 -13 2141 98 55 6 chr5 82442186 82442514 -117187636 - L1MA2 LINE L1 -2 6302 5959 213 39 0 0 chr5 82443282 82443308 -117186842 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 3837 117 40 40 chr5 82443308 82443981 -117186169 - L1PA13 LINE L1 -9 6154 5482 1949 121 7 20 chr5 82444441 82444739 -117185411 - AluSx SINE Alu -18 294 1 1325 211 79 11 chr5 82446073 82446429 -117183721 - LTR34 LTR ERV1 0 699 320 274 250 16 0 chr5 82446535 82446599 -117183551 + MIR SINE MIR 48 112 -150 1000 125 0 44 chr5 82446614 82446742 -117183408 + AluSc SINE Alu 1 122 -187 279 0 0 0 chr5 82446742 82446773 -117183377 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1000 125 0 44 chr5 82446773 82446804 -117183346 + AluSc SINE Alu 122 153 -156 180 0 0 0 chr5 82446804 82446824 -117183326 + (A)n Simple_repeat Simple_repeat 1 20 0 713 174 50 0 chr5 82447641 82447762 -117182388 - FLAM_A SINE Alu -6 136 10 2328 73 3 7 chr5 82447841 82448127 -117182023 - AluY SINE Alu -25 286 2 227 233 67 0 chr5 82448492 82448552 -117181598 + L1MC4 LINE L1 6636 6699 -1343 1438 127 9 0 chr5 82448991 82449211 -117180939 + L1MC1 LINE L1 6099 6320 -13 28 0 0 0 chr5 82449224 82449252 -117180898 + AT_rich Low_complexity Low_complexity 1 28 0 227 294 183 13 chr5 82449537 82449690 -117180460 + L1MC/D LINE L1 5623 5801 -2007 1863 135 81 43 chr5 82449710 82449818 -117180332 + MLT1B LTR MaLR 6 108 -282 1769 138 31 31 chr5 82449818 82450109 -117180041 + AluSx SINE Alu 1 291 -21 1863 135 81 43 chr5 82450109 82450371 -117179779 + MLT1B LTR MaLR 108 390 0 1635 142 23 68 chr5 82450593 82450903 -117179247 + AluJb SINE Alu 7 302 -10 444 261 80 7 chr5 82451695 82451833 -117178317 + MER117 DNA MER1_type 12 159 -38 1661 185 153 57 chr5 82452037 82452545 -117177605 + LTR64 LTR ERVK 2 558 0 2221 120 0 3 chr5 82453792 82454093 -117176057 + AluSx SINE Alu 1 300 -12 326 266 55 9 chr5 82454168 82454277 -117175873 - MIR SINE MIR -83 179 66 203 256 85 49 chr5 82454667 82454749 -117175401 - L2 LINE L2 0 3272 3188 310 299 98 49 chr5 82454847 82455215 -117174935 + L1ME4a LINE L1 5733 6118 -3 296 121 11 143 chr5 82455410 82455444 -117174706 + L1MB2 LINE L1 6093 6130 -41 2200 118 0 0 chr5 82455444 82455731 -117174419 + AluSq SINE Alu 1 287 -26 296 121 11 143 chr5 82455731 82455787 -117174363 + L1MB2 LINE L1 6130 6171 0 27 0 0 0 chr5 82455861 82455888 -117174262 + AT_rich Low_complexity Low_complexity 1 27 0 2578 153 21 2 chr5 82455896 82456314 -117173836 + MSTA LTR MaLR 2 427 -1 704 153 22 82 chr5 82456987 82457170 -117172980 - MER20B DNA MER1_type 0 219 48 183 138 0 0 chr5 82457328 82457357 -117172793 + L3b LINE CR1 1298 1326 -257 23 0 0 0 chr5 82457528 82457551 -117172599 + AT_rich Low_complexity Low_complexity 1 23 0 2087 148 0 0 chr5 82457558 82457862 -117172288 + AluJo SINE Alu 1 304 -8 204 38 0 113 chr5 82457907 82457960 -117172190 + (TTTTTA)n Simple_repeat Simple_repeat 3 49 0 48 43 0 0 chr5 82457962 82458031 -117172119 + AT_rich Low_complexity Low_complexity 1 69 0 270 192 232 30 chr5 82458478 82458577 -117171573 - L2 LINE L2 -8 3305 3187 362 217 24 12 chr5 82458654 82458737 -117171413 - MIR3 SINE MIR -48 160 77 2133 115 4 0 chr5 82459088 82459367 -117170783 + AluSp SINE Alu 1 280 -33 1264 79 0 0 chr5 82459367 82459519 -117170631 + AluSc SINE Alu 144 295 -14 2195 108 7 3 chr5 82460756 82461062 -117169088 + AluSx SINE Alu 1 307 -5 187 209 70 0 chr5 82461968 82462011 -117168139 + MER5A DNA MER1_type 70 115 -74 243 0 0 0 chr5 82462023 82462050 -117168100 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1577 171 25 28 chr5 82462694 82462980 -117167170 + AluJb SINE Alu 1 285 -27 255 93 0 0 chr5 82463374 82463417 -117166733 + (TG)n Simple_repeat Simple_repeat 2 44 0 2283 86 3 3 chr5 82463417 82463702 -117166448 - AluSq SINE Alu -28 285 1 1605 177 25 7 chr5 82463704 82463986 -117166164 - AluJo SINE Alu -25 287 1 1411 178 138 13 chr5 82464035 82464339 -117165811 + MER2 DNA MER2_type 2 343 -1 2464 78 0 22 chr5 82464673 82464992 -117165158 + AluSq SINE Alu 1 312 -1 1785 148 0 55 chr5 82465010 82465321 -117164829 + AluJb SINE Alu 3 296 -16 2168 114 10 0 chr5 82465463 82465753 -117164397 - AluSq SINE Alu -19 294 2 1783 103 4 0 chr5 82465759 82466002 -117164148 - AluSq SINE Alu 0 313 70 194 261 34 34 chr5 82466783 82466871 -117163279 - MIR SINE MIR 0 262 175 1158 144 20 15 chr5 82466898 82467100 -117163050 - AluSg/x SINE Alu -22 288 86 278 216 57 11 chr5 82467123 82467211 -117162939 - MIR SINE MIR -86 176 85 24 0 0 0 chr5 82467552 82467576 -117162574 + AT_rich Low_complexity Low_complexity 1 24 0 335 257 62 18 chr5 82467585 82467698 -117162452 - MIR SINE MIR -17 245 128 2258 100 0 3 chr5 82467736 82468026 -117162124 - AluSx SINE Alu -23 289 1 255 284 0 0 chr5 82468074 82468141 -117162009 + A-rich Low_complexity Low_complexity 1 67 0 985 113 0 0 chr5 82468309 82468442 -117161708 + AluSx SINE Alu 1 133 -179 1110 153 6 0 chr5 82468517 82468694 -117161456 + AluSx SINE Alu 118 295 -15 1379 153 3 77 chr5 82468776 82469063 -117161087 + AluJb SINE Alu 7 272 -40 220 70 47 0 chr5 82469064 82469107 -117161043 + (CAGGG)n Simple_repeat Simple_repeat 5 49 0 252 222 17 40 chr5 82469127 82469303 -117160847 + (CAA)n Simple_repeat Simple_repeat 2 173 0 * 346 219 16 62 chr5 82469202 82469583 -117160567 + A-rich Low_complexity Low_complexity 1 363 0 200 188 0 0 chr5 82469827 82469859 -117160291 + polypurine Low_complexity Low_complexity 1 32 0 1270 190 119 19 chr5 82469977 82470246 -117159904 - AluJo SINE Alu -16 296 1 2176 89 34 7 chr5 82470539 82470830 -117159320 - AluSx SINE Alu 0 312 14 255 235 44 15 chr5 82471262 82471330 -117158820 + MIR SINE MIR 176 245 -17 344 254 100 0 chr5 82471365 82471475 -117158675 + MIR SINE MIR 97 217 -45 1685 133 97 7 chr5 82471756 82472034 -117158116 + AluSx SINE Alu 1 303 -9 250 234 88 58 chr5 82472201 82472338 -117157812 - MIR SINE MIR -77 185 45 1575 144 63 14 chr5 82472341 82472661 -117157489 - AluJb SINE Alu 0 342 9 832 170 88 0 chr5 82473207 82473378 -117156772 + L1MB8 LINE L1 4807 4992 -1154 1817 178 7 10 chr5 82473386 82473690 -117156460 + AluJo SINE Alu 1 303 -9 2436 77 0 0 chr5 82473690 82473990 -117156160 + AluY SINE Alu 1 300 -11 826 178 105 27 chr5 82473990 82474071 -117156079 + L1MB8 LINE L1 5730 5803 -375 2157 128 3 0 chr5 82474071 82474368 -117155782 + AluSg SINE Alu 1 298 -12 826 178 105 27 chr5 82474368 82474505 -117155645 + L1MB8 LINE L1 5803 5965 -213 2441 72 0 3 chr5 82474683 82474974 -117155176 + AluSp SINE Alu 1 290 -23 2500 90 0 0 chr5 82475339 82475649 -117154501 - AluSg SINE Alu 0 310 1 2021 153 18 29 chr5 82476455 82476840 -117153310 - L1MB2 LINE L1 0 6171 5791 1205 122 6 6 chr5 82477123 82477304 -117152846 - AluSg/x SINE Alu 0 310 130 435 284 160 4 chr5 82477713 82477938 -117152212 - MIR SINE MIR -1 261 2 2311 90 10 3 chr5 82478067 82478366 -117151784 - AluSx SINE Alu -11 301 1 1850 118 90 10 chr5 82478377 82478666 -117151484 - AluSx SINE Alu 0 312 1 1733 148 0 4 chr5 82478908 82479164 -117150986 - AluJb SINE Alu -47 265 11 2521 64 0 10 chr5 82479361 82479673 -117150477 + AluSc SINE Alu 1 309 0 1977 128 10 23 chr5 82480042 82480348 -117149802 + AluSx SINE Alu 1 302 -10 440 176 29 20 chr5 82481027 82481129 -117149021 - U13 snRNA snRNA 0 104 2 188 319 14 14 chr5 82481316 82481385 -117148765 + L3 LINE CR1 1388 1456 -121 1630 162 0 32 chr5 82482230 82482514 -117147636 - AluJb SINE Alu -37 275 1 2347 111 0 0 chr5 82482729 82483036 -117147114 + AluSc SINE Alu 1 307 -2 806 184 0 13 chr5 82483121 82483273 -117146877 + FRAM SINE Alu 1 40 0 441 203 18 150 chr5 82483282 82483381 -117146769 + L1MEc LINE L1 2198 2252 -4144 1551 202 0 26 chr5 82483381 82483693 -117146457 + AluJo SINE Alu 1 304 -8 441 203 18 150 chr5 82483693 82483820 -117146330 + L1MEc LINE L1 2252 2394 -4002 2001 148 0 14 chr5 82483876 82484012 -117146138 + AluSx SINE Alu 1 137 -175 2327 112 0 0 chr5 82484012 82484316 -117145834 + AluSg SINE Alu 1 304 -6 2001 148 0 14 chr5 82484316 82484469 -117145681 + AluSx SINE Alu 137 286 -26 1274 148 0 5 chr5 82484474 82484676 -117145474 + LOR1a LTR ERV1 297 497 0 304 258 47 23 chr5 82484699 82484827 -117145323 + LTR33A LTR ERVL 386 516 -7 312 276 76 48 chr5 82484998 82485143 -117145007 + L3 LINE CR1 1428 1576 -1 869 144 0 0 chr5 82485166 82485284 -117144866 + FLAM_C SINE Alu 1 118 -25 396 0 0 0 chr5 82485286 82485330 -117144820 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 2196 125 3 0 chr5 82485762 82486057 -117144093 - AluSx SINE Alu -16 296 1 603 133 42 77 chr5 82486061 82486091 -117144059 - AluJo/FRAM SINE Alu -13 299 269 2229 99 26 3 chr5 82486091 82486393 -117143757 + AluSg SINE Alu 1 309 -1 603 133 42 77 chr5 82486393 82486505 -117143645 - AluJo/FRAM SINE Alu -43 269 162 2231 126 0 0 chr5 82487148 82487457 -117142693 - AluSx SINE Alu -3 309 1 198 0 0 0 chr5 82487508 82487530 -117142620 + (A)n Simple_repeat Simple_repeat 1 22 0 216 0 0 0 chr5 82487822 82487846 -117142304 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2882 145 30 62 chr5 82489274 82489397 -117140753 - MER44D DNA MER2_type -1883 604 479 1915 108 7 20 chr5 82489397 82489694 -117140456 - AluJb SINE Alu -19 293 1 2882 145 30 62 chr5 82489694 82490137 -117140013 - MER44D DNA MER2_type -2008 479 1 744 281 91 29 chr5 82490176 82490550 -117139600 + Tigger8 DNA MER2_type 220 616 -50 2395 60 0 3 chr5 82490575 82490873 -117139277 + AluY SINE Alu 1 297 -14 329 285 156 16 chr5 82490984 82491063 -117139087 + L1ME4a LINE L1 5866 5933 -188 2214 93 3 3 chr5 82491063 82491373 -117138777 + AluSq SINE Alu 1 310 -3 329 285 156 16 chr5 82491373 82491479 -117138671 + L1ME4a LINE L1 5933 6077 -44 1849 118 52 0 chr5 82491896 82492168 -117137982 - AluSg SINE Alu -24 286 1 1385 150 13 4 chr5 82492320 82492554 -117137596 + MER67B LTR ERV1 424 659 -2 1121 157 10 5 chr5 82492622 82492819 -117137331 + AluJo SINE Alu 84 281 -31 537 16 0 0 chr5 82492823 82492885 -117137265 + (CATA)n Simple_repeat Simple_repeat 2 63 0 2165 101 3 0 chr5 82492996 82493294 -117136856 + AluSx SINE Alu 1 299 -13 1992 127 13 3 chr5 82493600 82493907 -117136243 - AluSx SINE Alu -2 310 1 185 371 48 19 chr5 82493949 82494054 -117136096 + L2 LINE L2 3144 3251 -21 460 288 110 16 chr5 82494220 82494411 -117135739 - MIR SINE MIR -34 228 20 712 296 101 35 chr5 82494458 82494826 -117135324 + L2 LINE L2 2233 2624 -690 196 240 240 0 chr5 82494832 82494907 -117135243 + L2 LINE L2 3191 3283 -30 364 280 40 89 chr5 82494954 82495279 -117134871 + L2 LINE L2 2630 2938 -376 1910 114 23 23 chr5 82495465 82495771 -117134379 - AluSp SINE Alu -7 306 1 229 34 17 85 chr5 82497639 82497698 -117132452 + (CCCCG)n Simple_repeat Simple_repeat 5 59 0 2015 46 111 11 chr5 82498401 82498681 -117131469 - AluSg1 SINE Alu -1 308 1 465 239 9 26 chr5 82498752 82498865 -117131285 - MIR SINE MIR -63 145 35 233 250 0 31 chr5 82499441 82499505 -117130645 - MIR SINE MIR -130 78 17 1027 217 128 87 chr5 82499505 82499763 -117130387 + MER34C LTR ERV1 1 247 -338 2425 65 0 0 chr5 82499763 82500071 -117130079 - AluSg SINE Alu -2 308 1 1027 217 128 87 chr5 82500071 82500293 -117129857 + MER34C LTR ERV1 247 510 -75 2210 81 3 7 chr5 82500293 82500591 -117129559 + AluSg SINE Alu 1 297 -13 1027 217 128 87 chr5 82500591 82500671 -117129479 + MER34C LTR ERV1 510 585 0 2012 136 0 0 chr5 82500756 82501057 -117129093 + AluSq SINE Alu 1 301 -12 238 286 257 9 chr5 82501103 82501208 -117128942 + MIR SINE MIR 21 151 -111 3895 129 44 5 chr5 82501209 82501820 -117128330 + MER41B LTR ERV1 1 635 0 1390 121 17 26 chr5 82501820 82502052 -117128098 + MER39B LTR ERV1 424 653 0 332 321 0 0 chr5 82502189 82502273 -117127877 + (CCCCAG)n Simple_repeat Simple_repeat 1 84 0 1934 153 7 0 chr5 82502461 82502768 -117127382 + AluSx SINE Alu 1 309 -3 2572 42 0 0 chr5 82502928 82503237 -117126913 + AluY SINE Alu 1 309 -2 1780 100 0 4 chr5 82503620 82503860 -117126290 + AluSq SINE Alu 1 239 -74 257 0 30 0 chr5 82504193 82504226 -117125924 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1699 141 0 38 chr5 82504231 82504521 -117125629 - AluJb SINE Alu -32 280 2 848 113 0 56 chr5 82504538 82504680 -117125470 - AluSg SINE Alu -176 134 1 2088 116 0 0 chr5 82504681 82504975 -117125175 - AluSx SINE Alu -17 295 2 333 238 93 40 chr5 82505017 82505168 -117124982 - HAL1 LINE L1 -7 2500 2342 443 87 14 0 chr5 82505168 82505237 -117124913 + (TA)n Simple_repeat Simple_repeat 2 71 0 1829 128 0 59 chr5 82505237 82505391 -117124759 - AluSx SINE Alu -25 287 125 2052 115 0 3 chr5 82505391 82505687 -117124463 - AluSc SINE Alu -14 295 1 2155 100 0 10 chr5 82505693 82505994 -117124156 - AluSg1 SINE Alu -11 298 1 1829 128 0 59 chr5 82505994 82506137 -117124013 - AluSx SINE Alu -192 120 1 990 80 0 0 chr5 82506185 82506310 -117123840 - AluSq/x SINE Alu -187 125 1 567 301 14 0 chr5 82506580 82506723 -117123427 + MIR SINE MIR 2 146 -116 1511 110 129 29 chr5 82506861 82507133 -117123017 - AluSx SINE Alu -13 299 1 1347 162 150 15 chr5 82507143 82507409 -117122741 - AluJo SINE Alu 0 302 1 381 229 209 43 chr5 82507431 82507641 -117122509 - HAL1 LINE L1 -556 1951 1707 1927 86 8 0 chr5 82507733 82508019 -117122131 - AluSp SINE Alu 0 313 26 209 312 175 19 chr5 82508021 82508284 -117121866 + L2 LINE L2 1516 1819 -1495 1869 60 8 20 chr5 82508653 82508902 -117121248 + AluSg SINE Alu 56 301 -9 2327 74 0 0 chr5 82509106 82509405 -117120745 - AluY SINE Alu -12 299 1 1473 129 17 61 chr5 82509524 82509818 -117120332 + AluJo SINE Alu 6 286 -26 25 31 0 0 chr5 82509818 82509850 -117120300 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 82509978 82509999 -117120151 + AT_rich Low_complexity Low_complexity 1 21 0 2365 45 0 3 chr5 82510007 82510297 -117119853 + AluY SINE Alu 1 289 -22 2129 78 0 11 chr5 82511192 82511474 -117118676 - AluSg SINE Alu -31 279 1 1930 123 3 23 chr5 82511519 82511829 -117118321 + AluSx SINE Alu 1 304 -8 1936 126 3 20 chr5 82512285 82512579 -117117571 + AluSx SINE Alu 3 291 -21 1797 130 70 0 chr5 82512653 82512937 -117117213 + AluSx SINE Alu 1 304 -8 2206 93 6 10 chr5 82513599 82513911 -117116239 + AluSx SINE Alu 1 311 -1 2107 110 10 0 chr5 82513919 82514228 -117115922 + AluSx SINE Alu 1 312 0 1476 160 47 25 chr5 82514271 82514546 -117115604 + AluJo SINE Alu 24 304 -8 225 227 67 0 chr5 82514730 82514805 -117115345 + L1ME LINE L1 5422 5501 -669 2001 123 0 10 chr5 82514840 82515140 -117115010 + AluSx SINE Alu 1 297 -15 543 117 16 133 chr5 82515300 82515428 -117114722 - FLAM_A SINE Alu -20 122 10 2320 86 0 6 chr5 82515474 82515787 -117114363 - AluSx SINE Alu -1 311 1 395 271 96 14 chr5 82515879 82516159 -117113991 - L1M4 LINE L1 -1079 5067 4765 2090 118 0 7 chr5 82516163 82516467 -117113683 - AluSc SINE Alu -7 302 1 598 186 0 42 chr5 82516473 82516591 -117113559 - FRAM SINE Alu -5 171 59 391 92 0 15 chr5 82516599 82516664 -117113486 + FLAM_A SINE Alu 70 133 0 863 207 30 0 chr5 82516743 82516907 -117113243 - FAM SINE Alu -6 169 1 800 148 7 22 chr5 82517115 82517250 -117112900 + HsTC2 DNA Tc2 1250 1558 -340 1939 95 7 0 chr5 82517262 82517535 -117112615 - AluSp SINE Alu -2 311 37 623 147 0 0 chr5 82517535 82517637 -117112513 + AluSg/x SINE Alu 208 309 -1 477 258 47 70 chr5 82517834 82517980 -117112170 - MLT1J LTR MaLR -294 183 29 1980 75 57 0 chr5 82518133 82518398 -117111752 + AluSg SINE Alu 1 280 -30 288 0 0 0 chr5 82518398 82518430 -117111720 + (CA)n Simple_repeat Simple_repeat 1 32 0 368 311 0 0 chr5 82518441 82518531 -117111619 + L1MC4 LINE L1 6614 6703 -1339 294 29 0 0 chr5 82518538 82518573 -117111577 + (TG)n Simple_repeat Simple_repeat 2 36 0 581 106 64 0 chr5 82518707 82518801 -117111349 + FRAM SINE Alu 72 171 -5 303 300 128 44 chr5 82518810 82519060 -117111090 - L1MEd LINE L1 -5833 286 16 286 283 10 0 chr5 82519128 82519227 -117110923 + L1M4 LINE L1 3580 3679 -2467 306 0 0 0 chr5 82519228 82519262 -117110888 + (CA)n Simple_repeat Simple_repeat 1 34 0 234 213 0 0 chr5 82519304 82519351 -117110799 + MLT1K LTR MaLR 487 533 -55 2003 123 3 0 chr5 82519460 82519745 -117110405 + AluSx SINE Alu 1 286 -26 1719 171 0 3 chr5 82519781 82520080 -117110070 - AluSx SINE Alu -10 302 5 1054 226 24 24 chr5 82520094 82520390 -117109760 - L1MA9 LINE L1 -30 6282 5987 1869 137 10 0 chr5 82520423 82520715 -117109435 + AluSx SINE Alu 1 295 -17 2175 100 0 0 chr5 82520717 82521008 -117109142 + AluSq SINE Alu 1 291 -22 2248 103 0 6 chr5 82521010 82521322 -117108828 + AluSx SINE Alu 1 310 -2 474 221 86 49 chr5 82521339 82521502 -117108648 + L1M4 LINE L1 3843 4011 -2135 407 293 57 29 chr5 82521765 82521905 -117108245 - MIR3 SINE MIR -44 164 21 2074 115 0 47 chr5 82522019 82522192 -117107958 - AluSx SINE Alu -6 306 153 2330 75 0 0 chr5 82522192 82522487 -117107663 - AluY SINE Alu -16 295 1 2074 115 0 47 chr5 82522487 82522634 -117107516 - AluSx SINE Alu -159 153 1 1388 192 52 0 chr5 82522635 82522922 -117107228 - AluJo SINE Alu -10 302 1 2092 114 3 0 chr5 82523031 82523328 -117106822 - AluSx SINE Alu -14 298 1 532 283 0 8 chr5 82523438 82523558 -117106592 + MER91B DNA MER1_type 13 131 -59 1674 139 46 14 chr5 82524074 82524355 -117105795 + AluJb SINE Alu 1 290 -22 2430 201 56 104 chr5 82524358 82525461 -117104689 - L1M4 LINE L1 -3115 3267 2226 1878 145 47 0 chr5 82525461 82525757 -117104393 - AluSx SINE Alu 0 312 3 2042 120 0 7 chr5 82525767 82526066 -117104084 - AluSg SINE Alu -13 297 1 737 97 0 11 chr5 82526119 82526356 -117103794 + AluSp SINE Alu 1 296 -17 2153 158 42 16 chr5 82526357 82526736 -117103414 - MSTB1 LTR MaLR -40 392 4 389 277 0 0 chr5 82526757 82526869 -117103281 - L1M4 LINE L1 -4182 2202 2091 782 178 7 0 chr5 82526883 82527035 -117103115 + L1MA9 LINE L1 4331 4483 -1663 802 176 0 0 chr5 82527047 82527172 -117102978 + FLAM_C SINE Alu 1 125 -18 498 154 0 0 chr5 82527200 82527291 -117102859 + L1MA9 LINE L1 4486 4576 -1570 * 2888 191 21 81 chr5 82527281 82527711 -117102439 + L1MA9 LINE L1 4507 4961 -1185 1872 140 17 3 chr5 82527711 82528004 -117102146 + AluSx SINE Alu 1 297 -15 1806 116 40 0 chr5 82528012 82528288 -117101862 + AluSx SINE Alu 7 293 -19 186 43 0 0 chr5 82528292 82528315 -117101835 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 2888 191 21 81 chr5 82528315 82528672 -117101478 + L1MA9 LINE L1 4971 5260 -886 2173 105 0 0 chr5 82528673 82528969 -117101181 + AluSx SINE Alu 1 296 -16 1570 165 11 77 chr5 82529092 82529149 -117101001 + L1MA9 LINE L1 5270 5329 -962 2145 104 0 3 chr5 82529149 82529448 -117100702 - AluSx SINE Alu -14 298 1 1570 165 11 77 chr5 82529448 82529753 -117100397 + L1MA9 LINE L1 5329 5608 -683 1647 180 0 11 chr5 82529753 82530082 -117100068 + AluJb SINE Alu 1 326 0 2681 142 19 15 chr5 82531536 82532002 -117098148 + L1MA9 LINE L1 5593 6060 -252 446 164 77 19 chr5 82532079 82532183 -117097967 + L1MA9 LINE L1 6181 6290 -22 1805 97 59 45 chr5 82532184 82532337 -117097813 - AluSx SINE Alu -18 294 134 2100 107 3 22 chr5 82532337 82532655 -117097495 - AluSx SINE Alu 0 312 1 1805 97 59 45 chr5 82532655 82532791 -117097359 - AluSx SINE Alu -178 134 1 923 176 12 6 chr5 82532794 82532959 -117097191 - AluJo/FRAM SINE Alu -14 298 133 1593 181 7 20 chr5 82532962 82533261 -117096889 - AluJb SINE Alu -17 295 1 578 141 0 0 chr5 82533672 82533764 -117096386 + AluSg/x SINE Alu 207 298 -12 2041 135 0 3 chr5 82534159 82534462 -117095688 - AluSx SINE Alu -10 302 1 1074 294 99 8 chr5 82534639 82535024 -117095126 - L2 LINE L2 0 3313 2894 2341 171 8 88 chr5 82535066 82535330 -117094820 + L1M4 LINE L1 5175 5459 -719 2099 115 0 0 chr5 82535330 82535639 -117094511 + AluSx SINE Alu 1 309 0 2341 171 8 88 chr5 82535639 82536016 -117094134 + L1M4 LINE L1 5459 5768 -410 1564 169 25 11 chr5 82536019 82536298 -117093852 - AluJo SINE Alu -26 286 4 570 313 125 0 chr5 82536323 82536531 -117093619 - MIR SINE MIR -6 256 23 381 275 182 0 chr5 82536545 82536792 -117093358 - L2 LINE L2 -1326 1988 1697 1509 198 3 6 chr5 82536899 82537212 -117092938 + AluJo SINE Alu 1 312 0 1156 111 37 98 chr5 82537321 82537565 -117092585 - AluSg/x SINE Alu -2 308 80 367 191 29 15 chr5 82537888 82537956 -117092194 - MER5B DNA MER1_type -3 175 107 1439 179 44 62 chr5 82537956 82538111 -117092039 - L1MC4 LINE L1 -159 7671 7515 2315 89 0 0 chr5 82538111 82538415 -117091735 - AluSq SINE Alu -9 304 1 1439 179 44 62 chr5 82538415 82538462 -117091688 - L1MC4 LINE L1 -315 7515 7469 2000 83 10 43 chr5 82538462 82538762 -117091388 + AluSc SINE Alu 1 290 -19 1439 179 44 62 chr5 82538762 82539020 -117091130 - L1MC4 LINE L1 -361 7469 7231 2828 202 37 54 chr5 82539026 82539212 -117090938 - L1MD3 LINE L1 -1629 6156 5968 2338 106 3 0 chr5 82539212 82539523 -117090627 + AluSp SINE Alu 1 312 -1 2828 202 37 54 chr5 82539523 82539703 -117090447 - L1MD3 LINE L1 -1817 5968 5786 2176 115 7 0 chr5 82539703 82539998 -117090152 + AluSx SINE Alu 1 297 -15 2097 121 10 3 chr5 82539998 82540296 -117089854 + AluSx SINE Alu 1 300 -12 2828 202 37 54 chr5 82540296 82540767 -117089383 - L1MD3 LINE L1 -1997 5788 5385 6463 68 30 41 chr5 82542233 82544036 -117086114 + SVA Other Other 4 1383 -3 27 0 0 0 chr5 82544036 82544063 -117086087 + AT_rich Low_complexity Low_complexity 1 27 0 784 217 40 40 chr5 82544064 82544262 -117085888 + MER74A LTR ERVL 296 493 -65 186 43 0 0 chr5 82544262 82544285 -117085865 + (A)n Simple_repeat Simple_repeat 1 23 0 2257 108 7 3 chr5 82544616 82544921 -117085229 - AluSq SINE Alu -7 306 1 590 164 45 15 chr5 82544924 82545058 -117085092 - L1MD3 LINE L1 -949 5395 5258 1511 113 28 0 chr5 82545072 82545285 -117084865 - MER4D LTR ERV1 0 872 654 1147 112 31 0 chr5 82545286 82545447 -117084703 + AluSg/x SINE Alu 147 312 0 676 90 14 139 chr5 82545451 82545595 -117084555 - MER4E LTR ERV1 -210 569 444 904 196 0 6 chr5 82545595 82545753 -117084397 + AluJb SINE Alu 134 290 -22 2560 132 24 40 chr5 82545753 82545882 -117084268 - MER4D LTR ERV1 -454 449 320 2267 92 13 10 chr5 82545882 82546186 -117083964 + AluSc SINE Alu 1 305 -4 2560 132 24 40 chr5 82546186 82546510 -117083640 - MER4D LTR ERV1 -583 320 3 2307 205 54 39 chr5 82546559 82546786 -117083364 - L1MD3 LINE L1 -904 5242 5020 1339 131 234 4 chr5 82546786 82547030 -117083120 - AluSx SINE Alu -12 300 1 2307 205 54 39 chr5 82547030 82547268 -117082882 - L1MD3 LINE L1 -1126 5020 4763 2145 120 3 3 chr5 82547268 82547569 -117082581 - AluSq SINE Alu -12 301 1 2307 205 54 39 chr5 82547569 82547713 -117082437 - L1MD3 LINE L1 -1383 4763 4623 879 207 51 5 chr5 82548057 82548274 -117081876 - L1MD3 LINE L1 -1509 4637 4411 552 272 44 0 chr5 82548275 82548411 -117081739 + MER82 DNA MER2_type 2 143 -510 2382 96 3 0 chr5 82548506 82548807 -117081343 - AluSx SINE Alu -10 302 1 303 191 44 15 chr5 82548902 82548970 -117081180 + MIR SINE MIR 37 106 -102 2681 35 0 25 chr5 82549062 82549381 -117080769 + AluY SINE Alu 1 311 0 351 0 0 0 chr5 82549660 82549699 -117080451 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 743 171 0 0 chr5 82549702 82549819 -117080331 - FLAM_C SINE Alu -16 117 1 22 0 0 0 chr5 82549862 82549884 -117080266 + AT_rich Low_complexity Low_complexity 1 22 0 359 219 62 0 chr5 82549990 82550086 -117080064 - L1MC4 LINE L1 -518 7524 7423 2417 168 41 56 chr5 82550088 82550625 -117079525 - LTR9 LTR ERV1 0 612 84 2016 92 0 15 chr5 82550625 82550896 -117079254 - AluSx SINE Alu -15 297 31 3370 118 205 67 chr5 82550896 82551618 -117078532 - LTR12 LTR ERV1 0 826 5 2081 201 72 11 chr5 82551634 82552177 -117077973 - pTR5 LTR ERV1 -1094 1344 769 268 73 122 0 chr5 82552187 82552228 -117077922 - AluSx SINE Alu -253 46 1 521 125 57 11 chr5 82552229 82552317 -117077833 - LTR9 LTR ERV1 -520 92 1 1406 182 85 64 chr5 82552326 82552688 -117077462 - L1MC4a LINE L1 -473 7335 6961 2100 70 6 122 chr5 82552688 82553031 -117077119 - AluSp SINE Alu -10 303 1 1406 182 85 64 chr5 82553031 82553092 -117077058 - L1MC4a LINE L1 -847 6961 6903 758 179 0 30 chr5 82553138 82553272 -117076878 + FRAM SINE Alu 1 122 -54 26 50 0 0 chr5 82553277 82553317 -117076833 + AT_rich Low_complexity Low_complexity 1 40 0 2189 68 60 0 chr5 82553327 82553608 -117076542 - AluY SINE Alu -13 298 1 1577 163 133 0 chr5 82553795 82554127 -117076023 + L1MD3 LINE L1 7610 7985 -10 2372 85 0 0 chr5 82554216 82554523 -117075627 - AluSp SINE Alu 0 307 1 1227 116 0 6 chr5 82554704 82554868 -117075282 - AluSx SINE Alu -29 283 121 7556 32 8 0 chr5 82554883 82556277 -117073873 - L1PA5 LINE L1 -5 6149 4762 3615 29 0 0 chr5 82556277 82556697 -117073453 + L1P LINE L1 3432 3851 -2295 860 156 7 0 chr5 82556700 82556835 -117073315 - AluSx SINE Alu -177 136 1 803 253 44 91 chr5 82556920 82557304 -117072846 + MLT1K LTR MaLR 215 580 -8 1728 175 0 7 chr5 82557754 82558045 -117072105 - AluJb SINE Alu -21 291 3 1153 31 0 0 chr5 82558132 82558262 -117071888 - AluY SINE Alu -16 295 166 1722 155 0 29 chr5 82558295 82558611 -117071539 + AluJb SINE Alu 1 307 -5 1904 141 47 3 chr5 82558671 82558970 -117071180 - AluJb SINE Alu 0 312 1 2294 109 3 3 chr5 82559241 82559554 -117070596 - AluSq SINE Alu 0 313 1 275 317 104 0 chr5 82559693 82559914 -117070236 + L1 LINE L1 2673 2916 -3230 206 338 28 0 chr5 82559945 82560016 -117070134 - MER91A DNA MER1_type -1 195 123 2109 137 0 13 chr5 82560413 82560727 -117069423 - AluSx SINE Alu -2 310 1 948 162 6 36 chr5 82560729 82560896 -117069254 - AluJb SINE Alu -18 294 133 642 147 0 18 chr5 82563618 82563727 -117066423 + FLAM_C SINE Alu 34 140 -3 341 51 76 25 chr5 82564002 82564081 -117066069 + T-rich Low_complexity Low_complexity 4 86 0 2048 104 10 10 chr5 82564090 82564378 -117065772 - AluSq SINE Alu -25 288 1 2376 251 83 31 chr5 82564477 82565325 -117064825 + L1MDa LINE L1 18 1249 -5291 2411 87 3 0 chr5 82565325 82565624 -117064526 + AluSp SINE Alu 1 300 -13 2376 251 83 31 chr5 82565624 82565823 -117064327 + L1MDa LINE L1 1249 1436 -5104 934 112 0 8 chr5 82565840 82565965 -117064185 + AluJo/FLAM SINE Alu 1 124 -188 1706 186 4 0 chr5 82565967 82566246 -117063904 + AluJo SINE Alu 1 280 -32 195 42 0 0 chr5 82566246 82566270 -117063880 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 666 193 129 135 chr5 82566270 82566325 -117063825 - LTR68 LTR ERV1 -416 324 270 2451 88 3 0 chr5 82566325 82566631 -117063519 - AluSp SINE Alu -2 311 5 666 193 129 135 chr5 82566631 82566901 -117063249 - LTR68 LTR ERV1 -470 270 1 2267 121 0 0 chr5 82567249 82567554 -117062596 + AluSx SINE Alu 1 305 -7 324 301 83 0 chr5 82568556 82568712 -117061438 - L1M4 LINE L1 -2873 3273 3105 235 148 0 19 chr5 82568734 82568788 -117061362 - L1MB4 LINE L1 0 6180 6128 695 208 0 8 chr5 82568814 82568944 -117061206 - FLAM_A SINE Alu 0 133 5 4374 184 41 15 chr5 82568944 82569558 -117060592 - L1MB2 LINE L1 -37 6134 5538 838 207 24 12 chr5 82569558 82569722 -117060428 - FRAM SINE Alu 0 166 1 4374 184 41 15 chr5 82569722 82570342 -117059808 - L1MB2 LINE L1 -633 5538 4862 23 24 0 24 chr5 82570718 82570738 -117059412 + AT_rich Low_complexity Low_complexity 1 20 -20 2148 131 0 13 chr5 82570738 82571051 -117059099 - AluSx SINE Alu -3 309 1 23 24 0 24 chr5 82571051 82571071 -117059079 + AT_rich Low_complexity Low_complexity 20 40 0 180 0 0 0 chr5 82571080 82571100 -117059050 + (T)n Simple_repeat Simple_repeat 1 20 0 957 86 0 0 chr5 82571257 82571400 -117058750 - AluY SINE Alu 0 309 167 1798 77 0 5 chr5 82571892 82572112 -117058038 - AluSc SINE Alu -20 289 71 2175 105 14 0 chr5 82572112 82572396 -117057754 - AluSp SINE Alu -17 296 7 346 87 0 0 chr5 82572397 82572443 -117057707 - AluSc SINE Alu -215 84 39 2315 77 10 7 chr5 82572556 82572856 -117057294 + AluSq SINE Alu 1 301 -12 229 104 0 42 chr5 82573704 82573752 -117056398 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 2616 184 109 79 chr5 82574344 82574439 -117055711 - L1ME2 LINE L1 -9 6155 6064 2618 56 0 3 chr5 82574439 82574745 -117055405 + AluSq SINE Alu 1 305 -8 2616 184 109 79 chr5 82574745 82575381 -117054769 - L1ME2 LINE L1 -100 6064 5386 705 164 0 57 chr5 82575381 82575521 -117054629 - FLAM_A SINE Alu -1 132 1 2616 184 109 79 chr5 82575521 82575647 -117054503 - L1ME2 LINE L1 -778 5386 5265 22 35 0 0 chr5 82576021 82576050 -117054100 + AT_rich Low_complexity Low_complexity 1 29 0 24 24 0 24 chr5 82576070 82576100 -117054050 + AT_rich Low_complexity Low_complexity 1 31 -10 1902 148 34 0 chr5 82576100 82576391 -117053759 + AluJb SINE Alu 1 301 -11 24 24 0 24 chr5 82576391 82576402 -117053748 + AT_rich Low_complexity Low_complexity 31 41 0 21 57 0 0 chr5 82576537 82576572 -117053578 + AT_rich Low_complexity Low_complexity 1 35 0 252 294 82 0 chr5 82576704 82576789 -117053361 - MIR3 SINE MIR -54 154 63 1216 148 15 15 chr5 82576884 82577080 -117053070 + AluJo SINE Alu 2 197 -115 593 133 0 11 chr5 82577081 82577197 -117052953 - AluSc SINE Alu 0 305 191 630 173 0 18 chr5 82577198 82577308 -117052842 + AluJo SINE Alu 187 294 -18 1206 205 37 2 chr5 82577333 82577593 -117052557 - L1MD1 LINE L1 -295 5866 5594 810 189 28 72 chr5 82577594 82577611 -117052539 - L1MD1 LINE L1 -747 5495 5479 1768 168 36 7 chr5 82577611 82577914 -117052236 - AluJb SINE Alu 0 312 1 810 189 28 72 chr5 82577914 82578145 -117052005 - L1MD1 LINE L1 -763 5479 5258 3019 237 54 49 chr5 82578165 82578361 -117051789 - L1MD1 LINE L1 -2016 4130 3937 2032 152 3 0 chr5 82578361 82578657 -117051493 - AluJo SINE Alu -15 297 1 3019 237 54 49 chr5 82578657 82579172 -117050978 - L1MD1 LINE L1 -2209 3937 3426 1663 140 35 28 chr5 82579172 82579457 -117050693 - AluJb SINE Alu -21 291 5 3019 237 54 49 chr5 82579457 82579795 -117050355 - L1MD1 LINE L1 -2720 3426 3071 2054 115 0 53 chr5 82579795 82580121 -117050029 - AluSx SINE Alu 0 312 1 3019 237 54 49 chr5 82580121 82580157 -117049993 - L1MD1 LINE L1 -3075 3071 3037 25 0 0 0 chr5 82580286 82580311 -117049839 + AT_rich Low_complexity Low_complexity 1 25 0 2055 121 4 0 chr5 82580482 82580790 -117049360 + AluSx SINE Alu 1 309 0 1984 148 3 0 chr5 82580799 82581102 -117049048 - AluSx SINE Alu -8 304 1 1054 170 19 106 chr5 82581103 82581216 -117048934 + AluJo SINE Alu 28 106 -206 1772 193 0 3 chr5 82581216 82581517 -117048633 + AluJb SINE Alu 1 300 -12 1054 170 19 106 chr5 82581517 82581668 -117048482 + AluJo SINE Alu 106 269 -43 489 200 14 7 chr5 82581698 82581713 -117048437 + (TA)n Simple_repeat Simple_repeat 2 15 -132 1527 166 0 4 chr5 82581713 82581960 -117048190 + AluJo SINE Alu 43 288 -24 489 200 14 7 chr5 82581960 82582089 -117048061 + (TA)n Simple_repeat Simple_repeat 15 147 0 238 342 55 25 chr5 82582403 82582602 -117047548 + L2 LINE L2 1537 1741 -1573 554 241 35 0 chr5 82582696 82582841 -117047309 - MIR SINE MIR 0 262 113 282 327 35 45 chr5 82582841 82583043 -117047107 - HAL1 LINE L1 -63 2444 2245 194 292 0 0 chr5 82583384 82583432 -117046718 - L2 LINE L2 -11 3261 3214 1353 219 48 123 chr5 82583461 82583702 -117046448 + LTR40a LTR ERVL 1 258 -261 1632 154 94 4 chr5 82583702 82583969 -117046181 + AluJb SINE Alu 1 291 -21 2308 102 3 3 chr5 82583979 82584282 -117045868 + AluSx SINE Alu 5 307 -5 1353 219 48 123 chr5 82584282 82584470 -117045680 + LTR40a LTR ERVL 267 393 -126 2286 106 0 3 chr5 82584470 82584772 -117045378 - AluSx SINE Alu -11 301 1 1353 219 48 123 chr5 82584772 82584891 -117045259 + LTR40a LTR ERVL 393 519 0 702 275 145 31 chr5 82584892 82585307 -117044843 - L2 LINE L2 -1010 2304 1843 801 182 5 30 chr5 82585415 82585430 -117044720 - MLT1B LTR MaLR -52 338 324 2255 107 7 0 chr5 82585430 82585729 -117044421 + AluSx SINE Alu 1 301 -11 801 182 5 30 chr5 82585729 82585869 -117044281 - MLT1B LTR MaLR -66 324 166 976 158 17 28 chr5 82586051 82586228 -117043922 - FAM SINE Alu 0 175 1 833 125 0 0 chr5 82586672 82586784 -117043366 + AluSq/x SINE Alu 19 130 -183 2067 119 13 0 chr5 82586786 82587089 -117043061 + AluSx SINE Alu 1 307 -5 1465 157 41 26 chr5 82587314 82587582 -117042568 + AluJb SINE Alu 21 292 -20 2365 64 0 7 chr5 82588359 82588654 -117041496 - AluSx SINE Alu -19 293 1 1915 169 3 6 chr5 82588656 82588969 -117041181 - AluJo SINE Alu 0 312 1 2258 117 0 0 chr5 82588998 82589296 -117040854 - AluSx SINE Alu -14 298 1 2467 88 3 0 chr5 82589560 82589868 -117040282 + AluSq SINE Alu 1 309 -4 208 320 13 64 chr5 82589871 82590092 -117040058 + L3 LINE CR1 709 914 -663 2375 67 0 3 chr5 82590860 82591160 -117038990 + AluY SINE Alu 1 299 -12 2164 99 0 0 chr5 82591329 82591612 -117038538 - AluSq SINE Alu -30 283 1 524 125 100 17 chr5 82591999 82592119 -117038031 - L1MC3 LINE L1 -164 7621 7492 204 40 0 0 chr5 82592131 82592156 -117037994 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 1826 143 27 30 chr5 82593532 82593902 -117036248 - THE1C LTR MaLR -6 369 1 2728 179 16 10 chr5 82594161 82594730 -117035420 - MER90 LTR ERV1 0 614 1 266 210 180 94 chr5 82595887 82596120 -117034030 - L1ME4a LINE L1 -22 6099 5847 335 265 241 18 chr5 82596266 82596436 -117033714 - L1ME4a LINE L1 -2018 5790 5583 700 281 79 17 chr5 82596488 82596890 -117033260 - L1ME LINE L1 -410 5711 5285 803 226 12 0 chr5 82596891 82597055 -117033095 + MER45A DNA AcHobo 1 166 -12 369 351 0 0 chr5 82598857 82599025 -117031125 + (CCA)n Simple_repeat Simple_repeat 1 168 0 2214 102 10 0 chr5 82599762 82600056 -117030094 - AluSx SINE Alu -14 298 2 405 153 0 61 chr5 82600704 82600867 -117029283 + CT-rich Low_complexity Low_complexity 3 155 0 736 160 6 22 chr5 82601468 82601649 -117028501 + CT-rich Low_complexity Low_complexity 3 180 0 647 235 0 22 chr5 82601661 82601797 -117028353 - FLAM_C SINE Alu 0 133 1 236 157 39 0 chr5 82601817 82601868 -117028282 + (CATA)n Simple_repeat Simple_repeat 3 55 0 2102 120 3 0 chr5 82601922 82602242 -117027908 - AluSx SINE Alu 0 321 1 1837 172 10 0 chr5 82602244 82602546 -117027604 - AluJo SINE Alu -7 305 1 2164 117 3 3 chr5 82602722 82603021 -117027129 - AluSx SINE Alu -13 299 1 23 0 0 0 chr5 82603454 82603477 -117026673 + AT_rich Low_complexity Low_complexity 1 23 0 1888 152 7 14 chr5 82603477 82603773 -117026377 - AluSx SINE Alu -18 294 1 2272 97 0 0 chr5 82603852 82604170 -117025980 + AluSx SINE Alu 1 318 0 1572 157 64 15 chr5 82604326 82604483 -117025667 - AluJo SINE Alu -22 290 113 225 0 0 0 chr5 82604483 82604508 -117025642 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1572 157 64 15 chr5 82604508 82604617 -117025533 - AluJo SINE Alu -199 113 11 448 247 22 153 chr5 82604718 82604824 -117025326 - MIR SINE MIR -20 242 124 966 198 0 0 chr5 82604824 82604991 -117025159 - FAM SINE Alu -8 167 1 448 247 22 153 chr5 82604991 82605008 -117025142 - MIR SINE MIR -138 124 106 5933 106 0 0 chr5 82605008 82605975 -117024175 - L1PA11 LINE L1 -11 6163 5197 824 94 0 0 chr5 82605975 82606081 -117024069 - U6 snRNA snRNA -1 106 1 448 247 22 153 chr5 82606081 82606178 -117023972 - MIR SINE MIR -154 108 49 2319 103 3 0 chr5 82606540 82606840 -117023310 - AluSg SINE Alu -9 301 1 1469 110 8 41 chr5 82607216 82607461 -117022689 + AluSg/x SINE Alu 67 303 -9 591 195 41 16 chr5 82607476 82607599 -117022551 + AluJb SINE Alu 7 132 -180 250 224 0 0 chr5 82607720 82607769 -117022381 + L1MC2 LINE L1 5485 5533 -2275 609 265 27 40 chr5 82607784 82608007 -117022143 + L1MC2 LINE L1 5611 5830 -1978 791 105 77 7 chr5 82608007 82608150 -117022000 + L1M2 LINE L1 5573 5725 -587 29 47 0 0 chr5 82608558 82608601 -117021549 + AT_rich Low_complexity Low_complexity 1 43 0 524 112 34 0 chr5 82608601 82608690 -117021460 - L1MA6 LINE L1 -9 6291 6200 307 260 125 10 chr5 82609882 82609986 -117020164 + MIR SINE MIR 70 185 -77 863 237 153 59 chr5 82610262 82610739 -117019411 - LTR33A LTR ERVL -1 522 1 586 294 92 8 chr5 82611095 82611333 -117018817 - L2 LINE L2 -727 2587 2330 21 0 0 0 chr5 82611369 82611390 -117018760 + AT_rich Low_complexity Low_complexity 1 21 0 277 292 42 25 chr5 82611395 82611515 -117018635 + HAL1 LINE L1 513 634 -1873 1137 79 0 0 chr5 82611606 82611746 -117018404 + AluSg SINE Alu 2 141 -169 285 154 0 0 chr5 82611746 82611798 -117018352 + Alu SINE Alu 250 301 0 256 143 0 0 chr5 82611896 82611938 -117018212 + Harlequin LTR ERV1 6855 6896 0 1575 201 42 42 chr5 82612020 82612429 -117017721 + LTR2 LTR ERV1 41 449 0 485 191 43 9 chr5 82613307 82613422 -117016728 + L1MC2 LINE L1 6220 6338 -6 198 0 0 0 chr5 82613518 82613540 -117016610 + (TTCC)n Simple_repeat Simple_repeat 3 24 0 2095 105 3 13 chr5 82613548 82613863 -117016287 - AluSx SINE Alu 0 312 1 1607 127 15 4 chr5 82613960 82614228 -117015922 - L1PA14 LINE L1 -2 6159 5889 26 0 0 27 chr5 82614292 82614312 -117015838 + AT_rich Low_complexity Low_complexity 1 21 -15 1158 159 191 20 chr5 82614312 82614443 -117015707 - AluJo SINE Alu -7 295 188 333 0 0 0 chr5 82614443 82614480 -117015670 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1158 159 191 20 chr5 82614480 82614600 -117015550 - AluJo SINE Alu -114 188 1 26 0 0 27 chr5 82614600 82614616 -117015534 + AT_rich Low_complexity Low_complexity 21 36 0 2000 130 4 4 chr5 82614673 82614970 -117015180 + AluSx SINE Alu 9 305 0 2249 106 0 3 chr5 82615182 82615483 -117014667 + AluSc SINE Alu 1 300 -9 2168 105 0 7 chr5 82615952 82616247 -117013903 - AluSx SINE Alu -19 293 1 2100 117 3 0 chr5 82616371 82616674 -117013476 + AluSx SINE Alu 1 304 0 700 237 13 13 chr5 82617318 82617647 -117012503 + FAM SINE Alu 1 193 0 264 257 69 76 chr5 82617693 82617837 -117012313 + MLT1H LTR MaLR 406 548 -1 21 36 0 0 chr5 82618238 82618266 -117011884 + AT_rich Low_complexity Low_complexity 1 28 0 225 260 0 0 chr5 82618345 82618395 -117011755 - L2 LINE L2 -8 3264 3215 424 268 87 27 chr5 82618547 82618730 -117011420 + Charlie8 DNA MER1_type 52 245 -2172 562 272 13 6 chr5 82618784 82618942 -117011208 + MER45A DNA AcHobo 4 162 -16 320 206 234 0 chr5 82619078 82619185 -117010965 - MER69 DNA AcHobo 0 2526 2395 1665 164 31 20 chr5 82619185 82619478 -117010672 + AluJo SINE Alu 1 296 -16 1085 145 0 0 chr5 82619788 82619961 -117010189 + AluSg/x SINE Alu 131 303 0 2085 146 7 3 chr5 82620656 82620965 -117009185 + AluSx SINE Alu 1 310 -2 1934 151 7 0 chr5 82621005 82621133 -117009017 + AluSx SINE Alu 1 127 -185 195 100 0 0 chr5 82621133 82621163 -117008987 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 1934 151 7 0 chr5 82621163 82621325 -117008825 + AluSx SINE Alu 127 293 -19 1002 219 106 84 chr5 82622306 82622663 -117007487 - MLT1A1 LTR MaLR 0 365 1 269 318 93 19 chr5 82623157 82623371 -117006779 + L2 LINE L2 1936 2165 -1149 468 256 30 24 chr5 82623702 82623866 -117006284 + LTR67 LTR ERVL 383 547 -10 318 251 204 30 chr5 82623883 82624050 -117006100 + L2 LINE L2 2203 2398 -916 205 342 132 18 chr5 82624119 82624233 -117005917 - L2 LINE L2 0 3272 3146 21 36 0 0 chr5 82624304 82624332 -117005818 + AT_rich Low_complexity Low_complexity 1 28 0 430 241 71 14 chr5 82624584 82624725 -117005425 - MIR SINE MIR 0 262 114 269 268 40 45 chr5 82624790 82624988 -117005162 - HAL1 LINE L1 -130 2377 2181 229 177 258 0 chr5 82625079 82625141 -117005009 + AluY SINE Alu 216 293 -8 498 146 27 0 chr5 82625145 82625255 -117004895 + (TA)n Simple_repeat Simple_repeat 1 113 0 997 174 0 0 chr5 82625262 82625417 -117004733 + FRAM SINE Alu 1 153 -23 524 281 145 37 chr5 82625418 82625770 -117004380 - L2 LINE L2 -96 3217 2828 198 91 0 0 chr5 82625862 82625895 -117004255 + (TG)n Simple_repeat Simple_repeat 1 33 0 186 356 67 7 chr5 82625908 82626057 -117004093 - L2 LINE L2 -826 2488 2331 236 298 0 0 chr5 82626183 82626240 -117003910 - L2 LINE L2 -6 3307 3251 504 284 193 14 chr5 82626253 82626549 -117003601 - L2 LINE L2 -990 2324 1976 1930 140 0 0 chr5 82626570 82626855 -117003295 + AluJb SINE Alu 1 285 -27 1704 166 25 0 chr5 82628116 82628394 -117001756 + AluJb SINE Alu 5 289 -23 275 231 132 0 chr5 82628615 82628706 -117001444 + L1MC5 LINE L1 6971 7073 -888 2587 46 0 0 chr5 82628706 82629010 -117001140 - AluY SINE Alu -7 304 1 39536 60 6 1 chr5 82631226 82637350 -116992800 - L1PA5 LINE L1 0 6154 2 2277 98 7 0 chr5 82637354 82637649 -116992501 - AluSc SINE Alu -12 297 1 1231 197 78 123 chr5 82637753 82637787 -116992363 + L1MC5 LINE L1 7144 7178 -783 2005 124 10 20 chr5 82637787 82638093 -116992057 + AluSx SINE Alu 1 303 -9 1231 197 78 123 chr5 82638093 82638665 -116991485 + L1MC5 LINE L1 7178 7708 -253 1866 118 56 39 chr5 82638665 82638970 -116991180 - AluSx SINE Alu 0 312 3 1231 197 78 123 chr5 82638970 82639149 -116991001 + L1MC5 LINE L1 7708 7894 -67 305 197 7 106 chr5 82639161 82639303 -116990847 + L1MC5 LINE L1 7705 7832 -129 1044 283 69 11 chr5 82639448 82639808 -116990342 - MLT1I LTR MaLR -10 399 19 689 219 56 6 chr5 82640236 82640414 -116989736 - MLT1A1 LTR MaLR -17 348 162 2260 84 60 6 chr5 82640433 82640765 -116989385 - THE1A LTR MaLR -5 350 1 1088 157 39 65 chr5 82640778 82641007 -116989143 - AluJb SINE Alu -3 309 87 578 230 34 20 chr5 82641012 82641160 -116988990 - MLT1A1 LTR MaLR -215 150 1 1538 168 0 57 chr5 82641571 82641868 -116988282 + AluJo SINE Alu 1 280 -32 189 0 0 0 chr5 82641868 82641889 -116988261 + (TAA)n Simple_repeat Simple_repeat 1 21 0 197 333 107 0 chr5 82642237 82642321 -116987829 + L2 LINE L2 3148 3240 -32 21 89 0 0 chr5 82642564 82642620 -116987530 + AT_rich Low_complexity Low_complexity 1 56 0 1717 188 0 7 chr5 82642875 82643184 -116986966 + AluJb SINE Alu 3 309 -3 1123 182 25 0 chr5 82644098 82644296 -116985854 - MER20 DNA MER1_type 0 219 17 204 40 0 0 chr5 82644581 82644606 -116985544 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 1582 153 12 101 chr5 82644843 82645170 -116984980 + AluJo SINE Alu 6 303 -9 430 277 191 27 chr5 82645431 82645955 -116984195 - L1ME4a LINE L1 0 6121 5512 204 281 244 0 chr5 82646232 82646314 -116983836 + L2 LINE L2 3140 3241 -31 265 313 48 0 chr5 82646328 82646411 -116983739 + MIR SINE MIR 160 246 -16 191 287 53 64 chr5 82646448 82646542 -116983608 - MIR SINE MIR -120 142 50 2287 84 0 29 chr5 82646609 82646919 -116983231 - AluSx SINE Alu -11 301 1 1964 125 0 29 chr5 82647033 82647345 -116982805 - AluJo SINE Alu -9 303 1 221 234 0 0 chr5 82647603 82647650 -116982500 + G-rich Low_complexity Low_complexity 4 50 0 233 262 63 32 chr5 82649093 82649219 -116980931 - L1ME4a LINE L1 -26 6095 5966 1247 151 105 26 chr5 82649475 82649827 -116980323 - Charlie1 DNA MER1_type -39 2722 2343 294 261 0 0 chr5 82649825 82649890 -116980260 - Charlie1 DNA MER1_type -2690 71 7 * 369 313 85 23 chr5 82649895 82650071 -116980079 - L1ME4a LINE L1 -398 5772 5586 361 291 77 54 chr5 82650276 82650537 -116979613 - L1ME LINE L1 -474 5647 5381 2257 91 3 0 chr5 82650648 82650944 -116979206 - AluSc SINE Alu -12 297 1 2220 68 3 89 chr5 82651019 82651357 -116978793 - AluSc SINE Alu 0 309 1 365 313 33 28 chr5 82651423 82651605 -116978545 - L1ME4a LINE L1 -91 6030 5848 654 303 108 33 chr5 82651688 82652036 -116978114 + L2 LINE L2 2149 2540 -774 765 181 0 8 chr5 82652036 82652169 -116977981 - FLAM_A SINE Alu -1 132 1 654 303 108 33 chr5 82652169 82652272 -116977878 + L2 LINE L2 2540 2634 -680 24 32 0 0 chr5 82652371 82652402 -116977748 + AT_rich Low_complexity Low_complexity 1 31 0 1262 229 79 104 chr5 82652899 82652971 -116977179 - HAL1 LINE L1 -1 2506 2434 1809 159 3 7 chr5 82652971 82653261 -116976889 + AluJo SINE Alu 3 291 -21 2487 83 3 3 chr5 82653266 82653579 -116976571 + AluSp SINE Alu 1 313 0 1262 229 79 104 chr5 82653579 82653633 -116976517 - HAL1 LINE L1 -77 2430 2376 1090 206 0 0 chr5 82653633 82653837 -116976313 - MER105 DNA DNA 0 204 1 1262 229 79 104 chr5 82653837 82654628 -116975522 - HAL1 LINE L1 -131 2376 1605 510 262 12 102 chr5 82654675 82654931 -116975219 - L2 LINE L2 -4 3309 3077 805 217 151 13 chr5 82654966 82655270 -116974880 - HAL1 LINE L1 -1069 1438 1093 * 9495 156 73 80 chr5 82655264 82655748 -116974402 - L1MC3 LINE L1 0 7785 7299 2414 81 0 0 chr5 82655748 82656043 -116974107 - AluSg SINE Alu -15 295 1 9495 156 73 80 chr5 82656043 82656325 -116973825 - L1MC3 LINE L1 -486 7299 7017 2482 75 3 0 chr5 82656325 82656632 -116973518 - AluSx SINE Alu -4 308 1 9495 156 73 80 chr5 82656632 82658373 -116971777 - L1MC3 LINE L1 -768 7017 5293 457 189 40 14 chr5 82658394 82658542 -116971608 + CT-rich Low_complexity Low_complexity 1 152 0 1726 193 0 3 chr5 82658548 82658838 -116971312 - AluJo SINE Alu -23 289 1 2093 234 62 2 chr5 82658843 82659289 -116970861 - L1MC3 LINE L1 -841 5305 4810 1672 160 6 26 chr5 82659289 82659601 -116970549 - AluJb SINE Alu -6 306 1 2093 234 62 2 chr5 82659601 82659768 -116970382 - L1MC3 LINE L1 -1336 4810 4655 1023 93 0 0 chr5 82659771 82659900 -116970250 - AluSg SINE Alu -181 129 1 305 317 0 8 chr5 82659900 82660023 -116970127 - L1MC3 LINE L1 -1476 4670 4549 2463 85 0 0 chr5 82660026 82660333 -116969817 - AluSg SINE Alu -3 307 1 1249 140 11 0 chr5 82660333 82660512 -116969638 - AluSg/x SINE Alu -15 297 117 9174 192 40 28 chr5 82660525 82662736 -116967414 - L1PA5 LINE L1 -7 6147 3963 2209 102 0 13 chr5 82662736 82663039 -116967111 - AluSg SINE Alu -11 299 1 9174 192 40 28 chr5 82663039 82663817 -116966333 - L1PA5 LINE L1 -2191 3963 3195 2291 91 0 10 chr5 82663817 82664124 -116966026 - AluY SINE Alu -7 304 1 9174 192 40 28 chr5 82664124 82664219 -116965931 - L1PA5 LINE L1 -2959 3195 3103 2133 101 0 4 chr5 82664219 82664496 -116965654 - AluSq SINE Alu 0 313 38 9174 192 40 28 chr5 82664496 82664572 -116965578 - L1PA5 LINE L1 -3051 3103 2962 332 201 79 47 chr5 82664573 82664753 -116965397 - HAL1 LINE L1 -1404 1103 913 2173 139 0 0 chr5 82664753 82665048 -116965102 - AluSx SINE Alu -17 295 1 332 201 79 47 chr5 82665048 82665081 -116965069 - HAL1 LINE L1 -1594 913 883 446 297 80 16 chr5 82665347 82665596 -116964554 - L1MEd LINE L1 -4881 1238 974 203 240 132 47 chr5 82665775 82665904 -116964246 + MER5C DNA MER1_type 185 324 0 295 232 95 30 chr5 82665904 82666072 -116964078 - L1MC5 LINE L1 -524 7437 7259 309 283 39 22 chr5 82666164 82666344 -116963806 - L1MC5 LINE L1 -731 7230 7048 278 229 29 0 chr5 82666399 82666469 -116963681 + L1M4 LINE L1 4511 4582 -1564 662 24 12 0 chr5 82666476 82666560 -116963590 + (TG)n Simple_repeat Simple_repeat 2 86 0 198 0 0 0 chr5 82666559 82666581 -116963569 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 360 86 35 0 chr5 82666587 82666645 -116963505 - L1PA10 LINE L1 -15 6153 6094 2757 81 115 48 chr5 82666756 82667210 -116962940 - L1PA10 LINE L1 -310 5858 5367 842 111 0 15 chr5 82667210 82667345 -116962805 - FLAM_C SINE Alu 0 133 1 2757 81 115 48 chr5 82667345 82667387 -116962763 - L1PA10 LINE L1 -801 5367 5329 231 220 82 75 chr5 82667388 82667702 -116962448 - L1MC4 LINE L1 -902 7059 6766 381 197 7 73 chr5 82667702 82667839 -116962311 - L1M4 LINE L1 -2907 3239 3112 2061 120 19 10 chr5 82667859 82668167 -116961983 + AluSx SINE Alu 1 311 -1 735 44 0 0 chr5 82668176 82668266 -116961884 + L1PA5 LINE L1 11 100 -6046 * 35484 52 6 3 chr5 82668262 82673765 -116956385 + L1PA5 LINE L1 623 6148 -6 350 216 6 102 chr5 82673879 82674046 -116956104 - L1M4 LINE L1 -3124 3022 2872 207 0 0 0 chr5 82674634 82674657 -116955493 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1516 198 32 0 chr5 82674659 82674937 -116955213 - AluJo SINE Alu -25 287 1 2162 119 0 13 chr5 82675020 82675196 -116954954 - AluSq SINE Alu -4 309 137 1641 93 0 90 chr5 82675196 82675530 -116954620 - AluSg SINE Alu -6 304 1 2162 119 0 13 chr5 82675530 82675664 -116954486 - AluSq SINE Alu -176 137 3 1664 184 0 26 chr5 82675768 82676072 -116954078 - AluJo SINE Alu -16 296 1 477 179 11 0 chr5 82676177 82676272 -116953878 + THE1C LTR MaLR 199 294 -81 411 283 86 43 chr5 82676609 82676796 -116953354 - L2 LINE L2 -1 3312 3118 423 0 0 0 chr5 82680852 82680899 -116949251 + (TG)n Simple_repeat Simple_repeat 1 47 0 1029 293 74 49 chr5 82682116 82682304 -116947846 - L2 LINE L2 -43 3270 3088 1885 168 0 13 chr5 82682304 82682602 -116947548 - AluSx SINE Alu -18 294 1 1029 293 74 49 chr5 82682602 82683044 -116947106 - L2 LINE L2 -225 3088 2629 427 250 124 16 chr5 82683543 82683835 -116946315 - LTR33A LTR ERVL -6 517 323 338 293 71 25 chr5 82683929 82684127 -116946023 - LTR50 LTR ERVL -583 212 6 23 33 0 0 chr5 82684178 82684208 -116945942 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr5 82684929 82684964 -116945186 + AT_rich Low_complexity Low_complexity 1 35 0 800 207 14 0 chr5 82685776 82685921 -116944229 - FRAM SINE Alu -30 146 1 652 232 0 14 chr5 82685945 82686087 -116944063 - FLAM_A SINE Alu -2 140 1 2290 92 17 3 chr5 82686097 82686392 -116943758 - AluSq SINE Alu -14 299 1 1407 169 77 16 chr5 82686429 82686795 -116943355 - Charlie1 DNA MER1_type -4 2757 2370 417 184 23 23 chr5 82686766 82686853 -116943297 - Charlie1 DNA MER1_type -2670 91 5 * 194 337 58 0 chr5 82687087 82687173 -116942977 - L2 LINE L2 -1 3271 3181 2178 106 3 19 chr5 82687175 82687486 -116942664 + AluSx SINE Alu 1 306 -6 26 30 0 0 chr5 82688612 82688645 -116941505 + AT_rich Low_complexity Low_complexity 1 33 0 360 292 124 31 chr5 82688934 82689095 -116941055 + MIR3 SINE MIR 21 196 -12 2194 118 24 0 chr5 82691010 82691307 -116938843 - AluSx SINE Alu -8 304 1 1029 185 48 35 chr5 82692174 82692348 -116937802 - MER46A DNA MER2_type -2495 236 57 2323 101 3 0 chr5 82692348 82692656 -116937494 + AluSx SINE Alu 1 309 -3 1029 185 48 35 chr5 82692656 82692708 -116937442 - MER46A DNA MER2_type -2674 57 7 190 254 79 16 chr5 82694140 82694203 -116935947 + L3 LINE CR1 1509 1575 -2 452 95 5 187 chr5 82694772 82695141 -116935009 - AluSq SINE Alu -11 302 1 452 303 119 5 chr5 82695377 82695562 -116934588 + MIR SINE MIR 30 235 -27 2334 117 0 0 chr5 82695600 82695898 -116934252 + AluSx SINE Alu 1 298 -14 378 234 126 9 chr5 82696461 82696572 -116933578 + MIR3 SINE MIR 85 208 0 22 0 0 0 chr5 82697948 82697970 -116932180 + AT_rich Low_complexity Low_complexity 1 22 0 241 184 238 81 chr5 82698016 82698094 -116932056 - L1ME4a LINE L1 0 6121 6057 2331 75 3 26 chr5 82698094 82698402 -116931748 + AluY SINE Alu 1 301 -10 241 184 238 81 chr5 82698402 82698546 -116931604 - L1ME4a LINE L1 -64 6057 5864 325 111 14 69 chr5 82698651 82698708 -116931442 + AluJ/FRAM SINE Alu 225 284 -18 258 32 0 0 chr5 82698708 82698739 -116931411 + (TAA)n Simple_repeat Simple_repeat 2 32 0 1135 122 11 0 chr5 82698740 82698929 -116931221 + L1MA7 LINE L1 6101 6291 0 325 111 14 69 chr5 82698929 82698941 -116931209 + AluJ/FRAM SINE Alu 283 292 -10 210 182 0 0 chr5 82698961 82698994 -116931156 + MIR3 SINE MIR 151 183 -25 2126 160 54 46 chr5 82699040 82699540 -116930610 + L1MB7 LINE L1 5666 6169 -15 1203 159 100 33 chr5 82699559 82699830 -116930320 - AluJo SINE Alu -23 289 1 297 0 0 0 chr5 82699889 82699922 -116930228 + (TG)n Simple_repeat Simple_repeat 2 34 0 2295 73 10 3 chr5 82699998 82700299 -116929851 - AluY SINE Alu -8 303 1 237 257 57 0 chr5 82700983 82701088 -116929062 + L1ME4a LINE L1 5979 6089 -32 1897 116 0 4 chr5 82702279 82702555 -116927595 + AluSx SINE Alu 1 275 -37 234 0 0 0 chr5 82702558 82702584 -116927566 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2965 160 67 33 chr5 82702903 82703699 -116926451 - L1MB8 LINE L1 -161 6017 5183 2397 74 0 7 chr5 82703735 82704033 -116926117 - AluSx SINE Alu -16 296 1 988 94 29 24 chr5 82704034 82704204 -116925946 - L1PA13 LINE L1 0 6163 5993 1611 147 0 26 chr5 82704305 82704570 -116925580 - AluJo SINE Alu -52 260 3 1764 150 26 40 chr5 82704571 82704950 -116925200 - L1MA7 LINE L1 -193 6098 5725 512 217 26 0 chr5 82704950 82705065 -116925085 - MER58B DNA MER1_type -1 340 223 416 175 31 31 chr5 82705073 82705170 -116924980 + L1MC2 LINE L1 5991 6087 -257 3071 137 31 111 chr5 82705170 82705720 -116924430 + Tigger1 DNA MER2_type 1 480 -1938 1845 176 3 3 chr5 82705720 82706022 -116924128 + AluJo SINE Alu 1 302 -10 3071 137 31 111 chr5 82706022 82706201 -116923949 + Tigger1 DNA MER2_type 480 672 -1746 3765 109 75 22 chr5 82706201 82707165 -116922985 + MER11A LTR ERVK 1 1266 0 * 10121 125 29 21 chr5 82707165 82707467 -116922683 + Tigger1 DNA MER2_type 667 965 -1453 1879 145 0 3 chr5 82707467 82707863 -116922287 - AluJb SINE Alu 0 395 1 10121 125 29 21 chr5 82707863 82708598 -116921552 + Tigger1 DNA MER2_type 965 1728 -690 2477 64 3 6 chr5 82708598 82708909 -116921241 + AluY SINE Alu 1 310 -1 10121 125 29 21 chr5 82708909 82709605 -116920545 + Tigger1 DNA MER2_type 1728 2417 -1 806 134 21 0 chr5 82709607 82709749 -116920401 + L1MC2 LINE L1 6087 6231 -113 239 188 50 75 chr5 82709803 82709849 -116920301 + L1MC2 LINE L1 6240 6285 -59 2425 106 0 0 chr5 82709849 82710160 -116919990 - AluSx SINE Alu -1 311 1 239 188 50 75 chr5 82710160 82710193 -116919957 + L1MC2 LINE L1 6285 6317 -27 1897 153 36 0 chr5 82710193 82710494 -116919656 + AluSx SINE Alu 1 312 0 1411 23 0 0 chr5 82710809 82711008 -116919142 + L1PA5 LINE L1 5959 6157 0 25 31 0 0 chr5 82712511 82712543 -116917607 + AT_rich Low_complexity Low_complexity 1 32 0 26 64 0 0 chr5 82712752 82712799 -116917351 + AT_rich Low_complexity Low_complexity 1 47 0 2020 209 16 5 chr5 82712918 82713359 -116916791 + L1MA9 LINE L1 5612 6057 -255 2090 104 0 17 chr5 82714055 82714367 -116915783 - AluSx SINE Alu 0 307 1 564 228 118 24 chr5 82714532 82714703 -116915447 + L1MA9 LINE L1 6044 6240 -72 186 71 0 0 chr5 82714703 82714731 -116915419 + (TCTA)n Simple_repeat Simple_repeat 4 31 0 564 228 118 24 chr5 82714731 82714770 -116915380 + L1MA9 LINE L1 6240 6274 -38 538 211 0 0 chr5 82715096 82715231 -116914919 - FRAM SINE Alu 0 192 58 22 0 0 0 chr5 82715518 82715540 -116914610 + AT_rich Low_complexity Low_complexity 1 22 0 333 350 39 0 chr5 82715870 82715973 -116914177 + L2 LINE L2 3203 3309 -4 816 184 76 22 chr5 82716006 82716191 -116913959 + L1MB7 LINE L1 5969 6163 -21 279 269 46 55 chr5 82716197 82716335 -116913815 + L1M4 LINE L1 4158 4295 -1851 2072 143 3 10 chr5 82716335 82716649 -116913501 + AluJo SINE Alu 1 312 0 279 269 46 55 chr5 82716649 82716729 -116913421 + L1M4 LINE L1 4295 4374 -1772 770 337 55 37 chr5 82717049 82717432 -116912718 + L2 LINE L2 2239 2628 -686 2116 93 4 0 chr5 82717562 82717840 -116912310 - AluSc SINE Alu -5 304 26 536 156 11 0 chr5 82718257 82718347 -116911803 - AluJ/FLAM SINE Alu -221 91 1 2522 66 0 0 chr5 82718439 82718741 -116911409 - AluY SINE Alu -9 302 1 2262 111 0 3 chr5 82718797 82719103 -116911047 - AluSg SINE Alu -5 305 1 318 326 104 26 chr5 82719242 82719581 -116910569 + MLT1L LTR MaLR 214 604 -11 343 196 10 93 chr5 82719599 82719696 -116910454 + L2 LINE L2 2626 2714 -600 1889 104 112 4 chr5 82719916 82720185 -116909965 + AluSc SINE Alu 1 298 -11 2219 127 0 0 chr5 82720446 82720746 -116909404 + AluSx SINE Alu 1 300 -12 375 296 68 17 chr5 82720876 82721052 -116909098 + L2 LINE L2 2877 3061 -211 2533 153 26 13 chr5 82721078 82721606 -116908544 - L1MB7 LINE L1 -278 5906 5372 21 0 0 0 chr5 82721753 82721774 -116908376 + AT_rich Low_complexity Low_complexity 1 21 0 871 212 86 40 chr5 82721981 82722025 -116908125 + MSTD LTR MaLR 1 42 -354 1882 137 0 24 chr5 82722025 82722317 -116907833 - AluJo SINE Alu -19 293 9 871 212 86 40 chr5 82722317 82722613 -116907537 + MSTD LTR MaLR 42 396 0 377 274 0 0 chr5 82722785 82722887 -116907263 - MLT1-int LTR MaLR -848 523 422 583 237 163 74 chr5 82723135 82723553 -116906597 - MLT1H1 LTR MaLR -8 547 93 527 140 26 26 chr5 82723562 82723676 -116906474 + Ricksha DNA DNA 9 122 -1132 * 5898 153 25 19 chr5 82723655 82724236 -116905914 + Ricksha DNA DNA 1710 2286 -968 1487 158 143 8 chr5 82724236 82724502 -116905648 + AluJo SINE Alu 1 302 0 5898 153 25 19 chr5 82724502 82724661 -116905489 + Ricksha DNA DNA 2286 2442 -812 2176 113 0 3 chr5 82724661 82724953 -116905197 - AluSx SINE Alu -21 291 1 5898 153 25 19 chr5 82724953 82725547 -116904603 + Ricksha DNA DNA 2442 3094 -160 1768 165 16 32 chr5 82725547 82725856 -116904294 + AluJo SINE Alu 6 309 -3 5898 153 25 19 chr5 82725856 82726005 -116904145 + Ricksha DNA DNA 3094 3241 -13 275 261 43 0 chr5 82726411 82726503 -116903647 + MIR SINE MIR 73 168 -94 2088 116 0 0 chr5 82727239 82727569 -116902581 + AluSq SINE Alu 1 330 0 2223 86 3 10 chr5 82728004 82728320 -116901830 + AluSq SINE Alu 1 313 0 413 275 40 40 chr5 82728330 82728479 -116901671 - MIR3 SINE MIR -39 169 21 758 293 65 8 chr5 82728733 82728979 -116901171 - MIR SINE MIR 0 262 3 272 244 72 56 chr5 82729201 82729381 -116900769 + L1MC5 LINE L1 7755 7937 -24 195 171 49 0 chr5 82729477 82729518 -116900632 - L2 LINE L2 -3155 159 117 1692 157 39 3 chr5 82729518 82729804 -116900346 + AluJo SINE Alu 1 296 -16 183 321 36 0 chr5 82729814 82729870 -116900280 - L3 LINE CR1 -155 1422 1365 * 267 289 100 0 chr5 82729863 82729953 -116900197 + MIR SINE MIR 54 152 -110 826 191 13 19 chr5 82729965 82730160 -116899990 + FAM SINE Alu 1 59 0 1994 250 86 69 chr5 82730165 82730360 -116899790 - L1MDb LINE L1 -3908 2813 2623 1856 149 17 23 chr5 82730360 82730661 -116899489 + AluSx SINE Alu 1 299 -13 1994 250 86 69 chr5 82730661 82730704 -116899446 - L1MDb LINE L1 -4098 2623 2582 1741 191 3 7 chr5 82730704 82731003 -116899147 - AluJo SINE Alu -14 298 1 1994 250 86 69 chr5 82731003 82731560 -116898590 - L1MDb LINE L1 -4139 2582 2036 2095 121 6 16 chr5 82731560 82731874 -116898276 + AluSx SINE Alu 1 311 -1 1994 250 86 69 chr5 82731874 82732608 -116897542 - L1MDb LINE L1 -4685 2036 1224 2026 140 20 3 chr5 82732608 82732908 -116897242 + AluSx SINE Alu 1 305 -7 1994 250 86 69 chr5 82732908 82733211 -116896939 - L1MDb LINE L1 -5497 1224 927 251 309 0 0 chr5 82733712 82733796 -116896354 - L1MDb LINE L1 -6210 330 247 1410 172 93 4 chr5 82733807 82734086 -116896064 - AluJo SINE Alu -8 304 1 277 257 115 36 chr5 82734086 82734404 -116895746 - L1MEd LINE L1 -4848 1281 948 28 29 0 0 chr5 82737612 82737647 -116892503 + AT_rich Low_complexity Low_complexity 1 35 0 754 165 0 0 chr5 82738267 82738382 -116891768 + FLAM_C SINE Alu 1 115 -28 21 0 0 0 chr5 82738392 82738413 -116891737 + AT_rich Low_complexity Low_complexity 1 21 0 583 235 211 89 chr5 82738413 82738492 -116891658 + L1MC4a LINE L1 5435 5503 -2305 1912 128 32 4 chr5 82738492 82738773 -116891377 + AluSx SINE Alu 1 289 -23 583 235 211 89 chr5 82738773 82739110 -116891040 + L1MC4a LINE L1 5503 5902 -1906 210 250 0 21 chr5 82739283 82739331 -116890819 + MER91B DNA MER1_type 25 71 -119 986 235 32 5 chr5 82739523 82739740 -116890410 + MER58A DNA MER1_type 2 224 0 302 167 136 15 chr5 82740619 82740685 -116889465 - Tigger8 DNA MER2_type -461 205 132 24 0 0 0 chr5 82741720 82741744 -116888406 + AT_rich Low_complexity Low_complexity 1 24 0 481 246 64 21 chr5 82742160 82742347 -116887803 + L1MEc LINE L1 762 956 -6182 244 257 131 44 chr5 82742978 82743008 -116887142 + L1MEc LINE L1 1326 1352 -5507 7518 38 28 0 chr5 82743008 82743881 -116886269 - MER11D LTR ERVK 0 897 1 244 257 131 44 chr5 82743881 82743920 -116886230 + L1MEc LINE L1 1352 1386 -5473 1836 158 3 0 chr5 82743920 82744218 -116885932 + AluJo SINE Alu 1 299 -13 244 257 131 44 chr5 82744218 82744330 -116885820 + L1MEc LINE L1 1386 1524 -5335 2330 77 0 0 chr5 82744332 82744629 -116885521 + AluY SINE Alu 3 299 -12 324 0 0 0 chr5 82744630 82744666 -116885484 + (CA)n Simple_repeat Simple_repeat 2 37 0 305 237 0 0 chr5 82744667 82744726 -116885424 - L1MC4 LINE L1 -1344 6698 6640 554 274 15 21 chr5 82744741 82745051 -116885099 + L1MEc LINE L1 1636 1945 -5004 767 157 0 8 chr5 82745188 82745309 -116884841 + FLAM_C SINE Alu 2 121 -22 1552 161 15 56 chr5 82745325 82745649 -116884501 + AluJb SINE Alu 1 311 -1 395 256 135 17 chr5 82745799 82746096 -116884054 + L1M4 LINE L1 4117 4448 -1698 2073 171 12 3 chr5 82746112 82746456 -116883694 + MER7A DNA MER2_type 2 346 0 301 326 11 5 chr5 82746485 82746669 -116883481 + L1M4 LINE L1 4524 4708 -1438 264 188 0 21 chr5 82746677 82746725 -116883425 - AluSg/x SINE Alu -113 189 143 5012 226 67 22 chr5 82746725 82748022 -116882128 - L1M4 LINE L1 -5186 1356 1 2589 230 102 54 chr5 82748065 82748509 -116881641 + L1ME LINE L1 819 1240 -5323 1939 129 3 3 chr5 82748509 82748804 -116881346 + AluSq SINE Alu 5 299 -14 2589 230 102 54 chr5 82748804 82749022 -116881128 + L1ME LINE L1 1240 1446 -5117 1825 158 3 19 chr5 82749022 82749339 -116880811 + AluJo SINE Alu 1 312 0 2589 230 102 54 chr5 82749339 82750001 -116880149 + L1ME LINE L1 1446 2354 -4209 582 220 48 0 chr5 82749999 82750185 -116879965 + L1ME LINE L1 3449 3643 -2739 * 2361 101 41 22 chr5 82750187 82750555 -116879595 + THE1C LTR MaLR 1 375 0 10914 98 21 29 chr5 82750555 82752148 -116878002 + THE1C-int LTR MaLR 1 1580 0 2368 108 13 51 chr5 82752148 82752538 -116877612 + THE1C LTR MaLR 1 375 0 1520 173 96 44 chr5 82752594 82752739 -116877411 + MLT1B LTR MaLR 4 140 -250 1752 117 44 4 chr5 82752739 82753037 -116877113 - AluSq SINE Alu 0 309 1 1520 173 96 44 chr5 82753037 82753255 -116876895 + MLT1B LTR MaLR 140 387 -3 289 157 176 46 chr5 82753295 82753448 -116876702 + L1MC5 LINE L1 7504 7676 -285 1301 170 9 13 chr5 82753452 82753681 -116876469 - MER46A DNA MER2_type -8 228 1 362 264 31 25 chr5 82753757 82753916 -116876234 + L1MC5 LINE L1 7772 7931 -30 404 285 88 53 chr5 82753920 82754316 -116875834 + L1ME LINE L1 4988 5397 -985 816 298 50 13 chr5 82754357 82754740 -116875410 + L1ME LINE L1 5499 5895 -503 231 307 79 0 chr5 82754761 82754901 -116875249 + L1ME LINE L1 5967 6117 -283 23 36 0 54 chr5 82755473 82755503 -116874647 + AT_rich Low_complexity Low_complexity 1 28 -25 2106 111 10 0 chr5 82755503 82755801 -116874349 + AluSx SINE Alu 1 301 -11 23 36 0 54 chr5 82755801 82755826 -116874324 + AT_rich Low_complexity Low_complexity 28 53 0 865 301 98 30 chr5 82755862 82756497 -116873653 + L1MC4a LINE L1 5494 6171 -1637 274 242 16 0 chr5 82756622 82756639 -116873511 + MER3 DNA MER1_type 31 48 -161 321 164 0 75 chr5 82756639 82756706 -116873444 - MER3 DNA MER1_type -1 208 147 804 171 0 0 chr5 82756709 82756838 -116873312 - FLAM_C SINE Alu -4 129 1 324 287 67 45 chr5 82757274 82757497 -116872653 + L1MC4a LINE L1 7427 7654 -154 2575 158 2 5 chr5 82758225 82758655 -116871495 + LTR3 LTR ERVK 1 429 0 39833 181 16 12 chr5 82758671 82762810 -116867340 + HERVK3 LTR ERVK 68 4191 -3052 7804 57 27 12 chr5 82762810 82763802 -116866348 - LTR13 LTR ERVK 0 1007 1 39833 181 16 12 chr5 82763802 82765832 -116864318 + HERVK3 LTR ERVK 4191 6212 -1031 2031 99 0 32 chr5 82765832 82766144 -116864006 - AluSg1 SINE Alu -7 302 1 39833 181 16 12 chr5 82766144 82766898 -116863252 + HERVK3 LTR ERVK 6212 7054 -189 2395 69 0 3 chr5 82766898 82767204 -116862946 + AluY SINE Alu 1 305 -6 39833 181 16 12 chr5 82767204 82767394 -116862756 + HERVK3 LTR ERVK 7054 7242 -1 2501 159 9 5 chr5 82767394 82767821 -116862329 + LTR3 LTR ERVK 1 429 0 1951 163 39 6 chr5 82767880 82768242 -116861908 - L1MB7 LINE L1 -154 6030 5657 182 267 133 19 chr5 82768703 82768913 -116861237 + L2 LINE L2 2538 2771 -543 399 212 60 86 chr5 82768914 82768948 -116861202 - MER58 DNA MER1_type -4 2416 2383 1870 123 31 3 chr5 82768948 82769240 -116860910 + AluSp SINE Alu 1 300 -13 399 212 60 86 chr5 82769240 82769356 -116860794 - MER58 DNA MER1_type -37 2383 2270 194 256 98 12 chr5 82769411 82769493 -116860657 - MIR SINE MIR -65 143 55 1998 133 3 0 chr5 82769855 82770155 -116859995 + AluSq SINE Alu 1 301 -12 243 236 18 0 chr5 82770198 82770229 -116859921 + MER3 DNA MER1_type 16 47 -162 574 242 188 0 chr5 82770229 82770394 -116859756 - MER3 DNA MER1_type 0 209 14 225 288 30 0 chr5 82770398 82770464 -116859686 + L1ME3A LINE L1 6055 6122 -48 301 274 111 8 chr5 82770503 82770620 -116859530 + MIR SINE MIR 53 181 -81 345 294 84 0 chr5 82771284 82771403 -116858747 - MIR SINE MIR -81 181 53 2264 75 10 7 chr5 82773503 82773811 -116856339 - AluSg1 SINE Alu 0 309 1 395 317 63 0 chr5 82774041 82774183 -116855967 - MIR SINE MIR -34 228 78 1922 196 129 5 chr5 82774556 82774990 -116855160 - MER77 LTR ERV1 -5 600 113 624 259 106 68 chr5 82775081 82775421 -116854729 + MLT1H LTR MaLR 1 353 -196 229 217 98 43 chr5 82775392 82775484 -116854666 + MLT1J2 LTR MaLR 328 424 -26 * 192 259 62 12 chr5 82775994 82776075 -116854075 + L2 LINE L2 1711 1795 -1519 2343 109 12 68 chr5 82776110 82776442 -116853708 + MLT1B LTR MaLR 2 308 -82 2186 63 0 73 chr5 82776442 82776759 -116853391 - AluY SINE Alu -17 294 1 2343 109 12 68 chr5 82776759 82776838 -116853312 + MLT1B LTR MaLR 308 390 0 665 259 82 61 chr5 82776869 82776940 -116853210 + L2 LINE L2 2438 2506 -808 1461 90 90 5 chr5 82776940 82777152 -116852998 - MER30 DNA MER1_type 0 230 1 665 259 82 61 chr5 82777152 82777423 -116852727 + L2 LINE L2 2506 2787 -527 828 150 0 0 chr5 82777427 82777554 -116852596 + FLAM_C SINE Alu 1 127 -16 226 250 208 32 chr5 82777554 82777805 -116852345 + L2 LINE L2 2768 3065 -248 196 336 74 25 chr5 82777805 82777927 -116852223 + L2 LINE L2 3181 3308 -5 2588 91 21 44 chr5 82778681 82779067 -116851083 - MER51B LTR ERV1 0 377 1 227 222 17 91 chr5 82779067 82779243 -116850907 + C-rich Low_complexity Low_complexity 6 168 0 223 254 30 36 chr5 82779832 82779997 -116850153 + (CGGA)n Simple_repeat Simple_repeat 1 164 0 2144 100 0 0 chr5 82780413 82780704 -116849446 - AluSx SINE Alu -21 291 1 421 246 26 18 chr5 82780995 82781109 -116849041 - MIR SINE MIR -1 261 147 1578 112 39 19 chr5 82782167 82782425 -116847725 + Tigger7 DNA MER2_type 2227 2489 -2 705 157 0 0 chr5 82782441 82782549 -116847601 + L1M4 LINE L1 5499 5606 -578 2177 88 0 7 chr5 82782560 82782856 -116847294 + AluY SINE Alu 1 294 -17 374 275 70 37 chr5 82782918 82783101 -116847049 - L1ME LINE L1 -470 5651 5468 281 359 159 15 chr5 82783129 82783324 -116846826 + MIR SINE MIR 40 262 0 216 296 0 0 chr5 82783448 82783502 -116846648 + L2 LINE L2 3255 3308 -5 * 407 261 112 48 chr5 82783496 82783684 -116846466 - L2 LINE L2 -12 3301 3102 2179 107 0 0 chr5 82783769 82784068 -116846082 - AluSg SINE Alu -11 299 1 2089 82 14 7 chr5 82784072 82784398 -116845752 - AluSc SINE Alu 0 328 1 2079 113 10 0 chr5 82784422 82784724 -116845426 - AluSp SINE Alu -8 305 1 394 234 11 11 chr5 82784724 82784818 -116845332 - L1MB7 LINE L1 -123 6061 5968 2215 98 0 3 chr5 82784822 82785128 -116845022 - AluSx SINE Alu -7 305 1 3206 166 43 3 chr5 82785128 82785903 -116844247 - L1MB7 LINE L1 -291 5893 5081 1387 238 19 33 chr5 82785902 82786115 -116844035 + L1M4 LINE L1 2684 2890 -3256 * 2007 121 3 13 chr5 82786115 82786422 -116843728 + AluSx SINE Alu 1 304 -8 1387 238 19 33 chr5 82786422 82786633 -116843517 + L1M4 LINE L1 2890 3102 -3044 500 222 47 118 chr5 82786728 82786863 -116843287 + MIR SINE MIR 45 161 -101 1668 79 0 9 chr5 82786863 82787090 -116843060 - AluY SINE Alu -5 306 82 500 222 47 118 chr5 82787090 82787166 -116842984 + MIR SINE MIR 161 241 -21 527 261 156 51 chr5 82787900 82788157 -116841993 - MLT1K LTR MaLR -5 583 300 476 237 93 21 chr5 82788678 82788820 -116841330 + MIR SINE MIR 100 250 -12 371 221 35 113 chr5 82789100 82789301 -116840849 + MIR SINE MIR 4 192 -69 196 246 25 107 chr5 82789409 82789531 -116840619 + MIR3 SINE MIR 11 122 -86 209 314 107 0 chr5 82789788 82789909 -116840241 - L2 LINE L2 0 3272 3139 298 334 143 30 chr5 82792383 82792754 -116837396 + L2 LINE L2 2348 2760 -554 357 298 151 67 chr5 82792885 82793018 -116837132 + L2 LINE L2 2833 2953 -319 2507 50 0 28 chr5 82793018 82793337 -116836813 - AluY SINE Alu -1 310 1 357 298 151 67 chr5 82793337 82793606 -116836544 + L2 LINE L2 2953 3269 -3 204 311 144 23 chr5 82794334 82794466 -116835684 + MIR SINE MIR 20 167 -95 295 233 93 0 chr5 82794747 82794833 -116835317 - MIR SINE MIR -115 147 54 340 342 48 29 chr5 82794839 82795213 -116834937 + L1M4 LINE L1 2123 2503 -3643 891 111 30 0 chr5 82795268 82795403 -116834747 + AluSg SINE Alu 1 139 -171 1857 131 7 13 chr5 82795407 82795541 -116834609 + AluSc SINE Alu 1 134 -175 2316 86 0 3 chr5 82795541 82795842 -116834308 + AluSg SINE Alu 1 300 -10 1857 131 7 13 chr5 82795842 82796005 -116834145 + AluSc SINE Alu 134 296 -13 2118 105 27 0 chr5 82796005 82796300 -116833850 + AluSq SINE Alu 1 303 -10 764 62 0 0 chr5 82796312 82796408 -116833742 - AluY SINE Alu -10 301 206 675 242 11 22 chr5 82796408 82796617 -116833533 + L1M4c LINE L1 1606 1898 -4484 2409 77 0 3 chr5 82796650 82796961 -116833189 + AluY SINE Alu 1 310 -1 656 139 89 0 chr5 82796983 82797084 -116833066 + AluSq/x SINE Alu 24 133 -180 1880 117 40 7 chr5 82797086 82797386 -116832764 + AluSg SINE Alu 1 310 0 1958 146 10 0 chr5 82797413 82797722 -116832428 + AluSx SINE Alu 1 312 0 734 188 7 29 chr5 82797722 82797928 -116832222 + L1MC/D LINE L1 5289 5490 -676 2135 110 0 13 chr5 82797936 82798244 -116831906 + AluSq SINE Alu 1 304 -9 946 95 8 0 chr5 82798846 82798972 -116831178 + FLAM_C SINE Alu 1 127 -16 1767 163 17 0 chr5 82798997 82799297 -116830853 + AluJb SINE Alu 1 305 -7 224 258 11 0 chr5 82800225 82800314 -116829836 + C-rich Low_complexity Low_complexity 6 95 0 2136 105 3 3 chr5 82800635 82800939 -116829211 + AluSx SINE Alu 2 305 -7 2038 115 10 0 chr5 82801585 82801880 -116828270 - AluSq SINE Alu -15 298 1 401 148 0 0 chr5 82801936 82801997 -116828153 + AluS SINE Alu 2 62 -247 2150 119 24 0 chr5 82853797 82854092 -116776058 - AluSx SINE Alu -10 302 1 1090 191 47 43 chr5 82854959 82855135 -116775015 - MER46A DNA MER2_type -2495 236 57 2300 98 3 0 chr5 82855135 82855440 -116774710 + AluSx SINE Alu 3 308 -4 1090 191 47 43 chr5 82855440 82855498 -116774652 - MER46A DNA MER2_type -2674 57 1 194 254 79 16 chr5 82856857 82856920 -116773230 + L3 LINE CR1 1509 1575 -2 2494 50 0 13 chr5 82857489 82857789 -116772361 - AluY SINE Alu -15 296 1 460 303 119 5 chr5 82858008 82858193 -116771957 + MIR SINE MIR 30 235 -27 2318 114 0 0 chr5 82858231 82858529 -116771621 + AluSx SINE Alu 1 298 -14 383 234 126 9 chr5 82859092 82859203 -116770947 + MIR3 SINE MIR 85 208 0 22 0 0 0 chr5 82860579 82860601 -116769549 + AT_rich Low_complexity Low_complexity 1 22 0 325 178 248 74 chr5 82860647 82860725 -116769425 - L1ME4a LINE L1 0 6121 6058 2319 75 3 26 chr5 82860725 82861033 -116769117 + AluY SINE Alu 1 301 -10 325 178 248 74 chr5 82861033 82861196 -116768954 - L1ME4a LINE L1 -63 6058 5838 967 299 92 33 chr5 82861273 82861848 -116768302 - L1MC4a LINE L1 -1706 6102 5494 32 42 0 42 chr5 82861884 82861925 -116768225 + AT_rich Low_complexity Low_complexity 1 39 -30 2146 106 11 0 chr5 82861925 82862207 -116767943 - AluSx SINE Alu -27 285 1 32 42 0 42 chr5 82862207 82862237 -116767913 + AT_rich Low_complexity Low_complexity 39 69 0 252 307 79 0 chr5 82862809 82862949 -116767201 - L1ME LINE L1 -289 6692 6542 871 271 148 13 chr5 82862970 82863632 -116766518 - L1ME LINE L1 -503 6470 5714 376 252 21 28 chr5 82863810 82863953 -116766197 - L1MC5 LINE L1 -48 7913 7772 1289 170 9 13 chr5 82864029 82864258 -116765892 + MER46A DNA MER2_type 1 228 -8 275 157 176 46 chr5 82864262 82864415 -116765735 - L1MC5 LINE L1 -285 7676 7504 1529 182 84 43 chr5 82864452 82864673 -116765477 - MLT1B LTR MaLR -4 386 142 1867 109 44 4 chr5 82864673 82864971 -116765179 + AluSq SINE Alu 1 309 0 1529 182 84 43 chr5 82864971 82865116 -116765034 - MLT1B LTR MaLR -248 142 4 2311 108 13 51 chr5 82865172 82865562 -116764588 - THE1C LTR MaLR 0 375 1 10652 99 21 29 chr5 82865562 82867155 -116762995 - THE1C-int LTR MaLR 0 1580 1 2309 101 41 22 chr5 82867155 82867523 -116762627 - THE1C LTR MaLR 0 375 1 618 215 48 0 chr5 82867525 82867711 -116762439 - L1M4c LINE L1 -2739 3643 3449 * 2509 227 101 63 chr5 82867709 82868380 -116761770 - L1M4c LINE L1 -4209 2354 1710 1968 159 3 10 chr5 82868380 82868694 -116761456 - AluJo SINE Alu 0 312 1 2509 227 101 63 chr5 82868694 82868912 -116761238 - L1M4c LINE L1 -4853 1710 1502 2039 129 3 3 chr5 82868912 82869207 -116760943 - AluSq SINE Alu -14 299 5 2509 227 101 63 chr5 82869207 82869651 -116760499 - L1M4c LINE L1 -5061 1502 819 4919 228 67 22 chr5 82869694 82870991 -116759159 + L1M4 LINE L1 1 1356 -5186 257 188 0 21 chr5 82870991 82871039 -116759111 + FRAM/FAM SINE Alu 7 53 -113 2012 177 12 3 chr5 82871260 82871604 -116758546 - MER7A DNA MER2_type 0 346 2 412 256 135 17 chr5 82871620 82871917 -116758233 - L1ME LINE L1 -1698 5259 4928 1642 161 15 56 chr5 82872067 82872391 -116757759 - AluJb SINE Alu -1 311 1 761 157 0 8 chr5 82872407 82872528 -116757622 - FLAM_C SINE Alu -22 121 2 530 272 15 25 chr5 82872665 82872976 -116757174 - L1ME LINE L1 -5004 1943 1636 396 138 0 0 chr5 82873016 82873081 -116757069 + (TG)n Simple_repeat Simple_repeat 2 66 0 2414 77 0 3 chr5 82873086 82873386 -116756764 - AluY SINE Alu -10 301 3 232 237 124 98 chr5 82873388 82873509 -116756641 - L1ME LINE L1 -5335 1524 1408 1922 153 3 0 chr5 82873509 82873796 -116756354 - AluJo SINE Alu -22 290 3 232 237 124 98 chr5 82873796 82873837 -116756313 - L1ME LINE L1 -5451 1408 1370 7337 35 28 1 chr5 82873837 82874711 -116755439 + MER11D LTR ERVK 1 897 0 232 237 124 98 chr5 82874711 82874741 -116755409 - L1ME LINE L1 -5489 1370 1326 488 242 70 21 chr5 82875372 82875558 -116754592 - L1ME LINE L1 -6182 956 762 24 0 0 0 chr5 82875973 82875997 -116754153 + AT_rich Low_complexity Low_complexity 1 24 0 325 167 136 15 chr5 82877032 82877098 -116753052 + Tigger8 DNA MER2_type 132 205 -461 992 235 32 5 chr5 82877977 82878194 -116751956 - MER58A DNA MER1_type 0 224 2 209 250 0 21 chr5 82878386 82878434 -116751716 - MER91B DNA MER1_type -119 71 25 687 255 209 82 chr5 82878436 82878944 -116751206 - L1MC4a LINE L1 -1711 6097 5503 1932 129 32 0 chr5 82878944 82879224 -116750926 - AluSx SINE Alu -23 289 1 687 255 209 82 chr5 82879224 82879303 -116750847 - L1MC4a LINE L1 -2305 5503 5435 21 0 0 0 chr5 82879303 82879324 -116750826 + AT_rich Low_complexity Low_complexity 1 21 0 742 165 0 0 chr5 82879334 82879449 -116750701 - FLAM_C SINE Alu -28 115 1 230 181 145 12 chr5 82879450 82879533 -116750617 - L1MC4a LINE L1 -2372 5436 5343 28 29 0 0 chr5 82880069 82880104 -116750046 + AT_rich Low_complexity Low_complexity 1 35 0 317 281 85 22 chr5 82883262 82883631 -116746519 + L1MDa LINE L1 1298 1692 -4848 1400 169 93 4 chr5 82883631 82883910 -116746240 + AluJo SINE Alu 1 304 -8 286 281 39 62 chr5 82883917 82884095 -116746055 + L1MDa LINE L1 243 416 -6124 2340 244 83 79 chr5 82884506 82884809 -116745341 + L1MDa LINE L1 927 1227 -5494 1990 140 20 3 chr5 82884809 82885109 -116745041 - AluSx SINE Alu -7 305 1 2340 244 83 79 chr5 82885109 82885843 -116744307 + L1MDa LINE L1 1227 1957 -4764 2095 118 6 16 chr5 82885843 82886157 -116743993 - AluSx SINE Alu -1 311 1 2340 244 83 79 chr5 82886157 82886714 -116743436 + L1MDa LINE L1 1957 2510 -4211 1709 191 3 7 chr5 82886714 82887013 -116743137 + AluJo SINE Alu 1 298 -14 2340 244 83 79 chr5 82887013 82887056 -116743094 + L1MDa LINE L1 2510 2551 -4170 1812 150 17 23 chr5 82887056 82887356 -116742794 - AluSx SINE Alu -14 298 1 2340 244 83 79 chr5 82887356 82887551 -116742599 + L1MDa LINE L1 2551 2813 -3908 243 79 0 0 chr5 82887556 82887594 -116742556 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 815 191 13 19 chr5 82887594 82887751 -116742399 - FAM SINE Alu -18 157 2 270 289 100 0 chr5 82887763 82887853 -116742297 - MIR SINE MIR -110 152 54 185 321 36 0 chr5 82887846 82887902 -116742248 + L3 LINE CR1 1365 1422 -155 * 1665 152 40 4 chr5 82887922 82888198 -116741952 - AluJo SINE Alu -26 286 1 194 171 49 0 chr5 82888198 82888239 -116741911 + L2 LINE L2 117 159 -3155 330 241 97 61 chr5 82888335 82888563 -116741587 - L1MC5 LINE L1 -24 7937 7702 608 71 24 0 chr5 82888640 82888725 -116741425 + L1PA13 LINE L1 5872 5958 -205 1217 93 34 15 chr5 82888825 82889029 -116741121 + L1PA13 LINE L1 5956 6163 0 2442 74 0 3 chr5 82889031 82889328 -116740822 + AluSx SINE Alu 1 296 -16 3355 153 98 34 chr5 82889339 82890163 -116739987 + L1MB8 LINE L1 5158 6017 -161 234 0 0 0 chr5 82890482 82890508 -116739642 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1913 116 0 4 chr5 82890511 82890787 -116739363 - AluSx SINE Alu -37 275 1 267 257 57 0 chr5 82891978 82892083 -116738067 - L1ME4a LINE L1 -32 6089 5979 411 273 22 79 chr5 82892156 82892423 -116737727 - L1ME4a LINE L1 -269 5852 5601 2261 76 10 3 chr5 82892730 82893031 -116737119 + AluY SINE Alu 1 303 -8 387 0 0 0 chr5 82893107 82893150 -116737000 + (CA)n Simple_repeat Simple_repeat 2 44 0 1190 162 100 33 chr5 82893209 82893480 -116736670 + AluJo SINE Alu 1 289 -13 2292 161 53 45 chr5 82893499 82894012 -116736138 - L1MB7 LINE L1 -15 6169 5653 210 182 0 0 chr5 82894045 82894078 -116736072 - MIR3 SINE MIR -25 183 151 1166 100 0 31 chr5 82894098 82894473 -116735677 - AluJb SINE Alu -20 292 138 3008 145 21 30 chr5 82894110 82894300 -116735850 - L1MA7 LINE L1 0 6291 6101 231 36 0 0 chr5 82894300 82894328 -116735822 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1806 139 0 24 chr5 82894328 82894615 -116735535 - AluJo SINE Alu -30 282 3 3008 145 21 30 chr5 82894615 82894997 -116735153 - L1MA7 LINE L1 -188 6103 5723 508 214 27 0 chr5 82894998 82895110 -116735040 - MER58B DNA MER1_type -4 337 223 416 175 31 31 chr5 82895118 82895215 -116734935 + L1MC2 LINE L1 5991 6087 -257 3071 137 31 111 chr5 82895215 82895765 -116734385 + Tigger1 DNA MER2_type 1 480 -1938 1845 176 3 3 chr5 82895765 82896067 -116734083 + AluJo SINE Alu 1 302 -10 3071 137 31 111 chr5 82896067 82896246 -116733904 + Tigger1 DNA MER2_type 480 672 -1746 3747 111 75 22 chr5 82896246 82897210 -116732940 + MER11A LTR ERVK 1 1266 0 * 10139 125 29 19 chr5 82897210 82897512 -116732638 + Tigger1 DNA MER2_type 667 965 -1453 1879 145 0 3 chr5 82897512 82897912 -116732238 - AluJb SINE Alu 0 399 1 10139 125 29 19 chr5 82897912 82898647 -116731503 + Tigger1 DNA MER2_type 965 1732 -686 2433 71 3 7 chr5 82898647 82898957 -116731193 + AluY SINE Alu 1 309 -2 10139 125 29 19 chr5 82898957 82899650 -116730500 + Tigger1 DNA MER2_type 1732 2417 -1 806 134 21 0 chr5 82899652 82899794 -116730356 + L1MC2 LINE L1 6087 6231 -113 239 188 50 75 chr5 82899848 82899894 -116730256 + L1MC2 LINE L1 6240 6285 -59 2398 107 0 0 chr5 82899894 82900202 -116729948 - AluSx SINE Alu -4 308 1 239 188 50 75 chr5 82900202 82900235 -116729915 + L1MC2 LINE L1 6285 6317 -27 1897 153 36 0 chr5 82900235 82900536 -116729614 + AluSx SINE Alu 1 312 0 1392 29 0 0 chr5 82900850 82901049 -116729101 + L1PA5 LINE L1 5959 6157 0 25 31 0 0 chr5 82902553 82902585 -116727565 + AT_rich Low_complexity Low_complexity 1 32 0 26 64 0 0 chr5 82902794 82902841 -116727309 + AT_rich Low_complexity Low_complexity 1 47 0 2020 209 16 5 chr5 82902960 82903401 -116726749 + L1MA9 LINE L1 5612 6057 -255 2155 93 0 21 chr5 82904097 82904410 -116725740 - AluSx SINE Alu 0 307 1 564 228 118 24 chr5 82904574 82904745 -116725405 + L1MA9 LINE L1 6044 6240 -72 186 71 0 0 chr5 82904745 82904773 -116725377 + (TCTA)n Simple_repeat Simple_repeat 4 31 0 564 228 118 24 chr5 82904773 82904812 -116725338 + L1MA9 LINE L1 6240 6274 -38 538 211 0 0 chr5 82905138 82905273 -116724877 - FRAM SINE Alu 0 192 58 22 0 0 0 chr5 82905560 82905582 -116724568 + AT_rich Low_complexity Low_complexity 1 22 0 333 350 39 0 chr5 82905912 82906015 -116724135 + L2 LINE L2 3203 3309 -4 816 184 76 22 chr5 82906048 82906233 -116723917 + L1MB7 LINE L1 5969 6163 -21 279 269 46 55 chr5 82906239 82906377 -116723773 + L1M4 LINE L1 4158 4295 -1851 2072 143 3 10 chr5 82906377 82906691 -116723459 + AluJo SINE Alu 1 312 0 279 269 46 55 chr5 82906691 82906771 -116723379 + L1M4 LINE L1 4295 4374 -1772 770 337 55 37 chr5 82907091 82907474 -116722676 + L2 LINE L2 2239 2628 -686 2108 91 4 0 chr5 82907604 82907879 -116722271 - AluSc SINE Alu -8 301 26 536 156 11 0 chr5 82908296 82908386 -116721764 - AluJ/FLAM SINE Alu -221 91 1 2522 66 0 0 chr5 82908478 82908780 -116721370 - AluY SINE Alu -9 302 1 2280 110 0 3 chr5 82908836 82909144 -116721006 - AluSg SINE Alu -3 307 1 318 326 104 26 chr5 82909283 82909622 -116720528 + MLT1L LTR MaLR 214 604 -11 343 196 10 93 chr5 82909640 82909737 -116720413 + L2 LINE L2 2626 2714 -600 1880 104 112 4 chr5 82909957 82910225 -116719925 + AluSc SINE Alu 1 297 -12 2251 123 0 0 chr5 82910486 82910787 -116719363 + AluSx SINE Alu 1 301 -11 375 296 68 17 chr5 82910917 82911093 -116719057 + L2 LINE L2 2877 3061 -211 2545 152 26 13 chr5 82911119 82911647 -116718503 - L1MB7 LINE L1 -278 5906 5372 21 0 0 0 chr5 82911794 82911815 -116718335 + AT_rich Low_complexity Low_complexity 1 21 0 871 212 86 40 chr5 82912022 82912066 -116718084 + MSTD LTR MaLR 1 42 -354 1882 137 0 24 chr5 82912066 82912358 -116717792 - AluJo SINE Alu -19 293 9 871 212 86 40 chr5 82912358 82912654 -116717496 + MSTD LTR MaLR 42 396 0 377 274 0 0 chr5 82912826 82912928 -116717222 - MLT1-int LTR MaLR -848 523 422 583 237 163 74 chr5 82913176 82913594 -116716556 - MLT1H1 LTR MaLR -8 547 93 527 140 26 26 chr5 82913603 82913717 -116716433 + Ricksha DNA DNA 9 122 -1924 * 6802 153 65 47 chr5 82913696 82914277 -116715873 + Ricksha DNA DNA 1710 2279 -967 1451 167 0 9 chr5 82914277 82914505 -116715645 + AluJo SINE Alu 1 226 -86 232 53 0 0 chr5 82914505 82914543 -116715607 + AluJo SINE Alu 265 302 0 6802 153 65 47 chr5 82914543 82914701 -116715449 + Ricksha DNA DNA 2279 2433 -813 2176 113 0 3 chr5 82914701 82914993 -116715157 - AluSx SINE Alu -21 291 1 6802 153 65 47 chr5 82914993 82915587 -116714563 + Ricksha DNA DNA 2433 3087 -159 1798 164 16 29 chr5 82915587 82915898 -116714252 + AluJo SINE Alu 6 312 0 6802 153 65 47 chr5 82915898 82916048 -116714102 + Ricksha DNA DNA 3087 3233 -13 275 261 43 0 chr5 82916454 82916546 -116713604 + MIR SINE MIR 73 168 -94 2088 116 0 0 chr5 82917282 82917612 -116712538 + AluSq SINE Alu 1 330 0 2213 85 3 3 chr5 82918047 82918365 -116711785 + AluSq SINE Alu 1 318 0 413 275 40 40 chr5 82918374 82918523 -116711627 - MIR3 SINE MIR -39 169 21 758 293 65 8 chr5 82918777 82919023 -116711127 - MIR SINE MIR 0 262 3 22 23 0 45 chr5 82919112 82919133 -116711017 + AT_rich Low_complexity Low_complexity 1 21 -21 2300 96 3 0 chr5 82919133 82919424 -116710726 + AluSp SINE Alu 1 292 -21 22 23 0 45 chr5 82919424 82919446 -116710704 + AT_rich Low_complexity Low_complexity 21 42 0 1970 222 19 27 chr5 82919952 82920475 -116709675 + MER44D DNA MER2_type 32 605 0 241 296 25 37 chr5 82920759 82920840 -116709310 + L2 LINE L2 3185 3264 -8 2386 104 0 0 chr5 82920880 82921189 -116708961 + AluSx SINE Alu 1 309 -3 22 0 0 0 chr5 82923262 82923284 -116706866 + AT_rich Low_complexity Low_complexity 1 22 0 2327 104 0 0 chr5 82923453 82923750 -116706400 + AluSx SINE Alu 1 297 -15 330 153 20 10 chr5 82923758 82923856 -116706294 + (TA)n Simple_repeat Simple_repeat 2 100 0 2128 102 13 40 chr5 82923904 82924207 -116705943 - AluSx SINE Alu -17 295 1 1968 159 3 10 chr5 82924207 82924516 -116705634 - AluJo SINE Alu -5 307 1 255 310 86 52 chr5 82925374 82925490 -116704660 + L2 LINE L2 3142 3261 -11 1826 174 0 0 chr5 82925570 82925857 -116704293 + AluJb SINE Alu 1 287 -25 21 0 0 0 chr5 82925963 82925984 -116704166 + AT_rich Low_complexity Low_complexity 1 21 0 966 279 103 12 chr5 82926432 82926848 -116703302 + L1MC4a LINE L1 5477 5930 -1878 22 88 0 0 chr5 82927130 82927187 -116702963 + AT_rich Low_complexity Low_complexity 1 57 0 482 200 118 0 chr5 82927410 82927545 -116702605 - L1MA9 LINE L1 -133 6179 6029 378 327 9 18 chr5 82927941 82928054 -116702096 + L2 LINE L2 3197 3308 -5 287 305 13 26 chr5 82928581 82928735 -116701415 - MLT1J LTR MaLR -33 478 327 183 80 0 0 chr5 82928961 82928986 -116701164 + (TA)n Simple_repeat Simple_repeat 2 26 0 213 193 18 18 chr5 82929032 82929089 -116701061 + (TA)n Simple_repeat Simple_repeat 1 57 0 1038 241 8 4 chr5 82929111 82929348 -116700802 + MER8 DNA MER2_type 1 238 -1 1878 142 0 40 chr5 82929416 82929718 -116700432 + AluSx SINE Alu 1 290 -22 693 165 60 75 chr5 82929874 82930074 -116700076 + MER20 DNA MER1_type 17 213 -6 3577 126 47 34 chr5 82930176 82930233 -116699917 - Tigger3(Golem) DNA MER2_type 0 3029 2974 2229 127 0 7 chr5 82930233 82930532 -116699618 + AluSx SINE Alu 3 299 -13 3577 126 47 34 chr5 82930532 82931171 -116698979 - Tigger3(Golem) DNA MER2_type -55 2974 2324 314 233 14 0 chr5 82931166 82931239 -116698911 + U3 snRNA snRNA 1 74 -143 * 1862 122 23 32 chr5 82931239 82931685 -116698465 + L1MA2 LINE L1 3336 3782 -3783 917 120 183 0 chr5 82931693 82931835 -116698315 + FRAM SINE Alu 1 160 -16 22085 47 5 1 chr5 82931841 82935469 -116694681 + L1PA5 LINE L1 2502 6150 -4 14631 152 31 12 chr5 82935477 82936186 -116693964 + L1MA2 LINE L1 3785 4480 -3243 2339 78 0 0 chr5 82936186 82936493 -116693657 + AluY SINE Alu 1 307 0 14631 152 31 12 chr5 82936493 82936564 -116693586 + L1MA2 LINE L1 4480 4548 -3175 2183 108 10 0 chr5 82936564 82936859 -116693291 + AluSx SINE Alu 4 301 -11 14631 152 31 12 chr5 82936859 82939230 -116690920 + L1MA2 LINE L1 4548 7024 -699 2093 101 0 17 chr5 82939230 82939564 -116690586 - AluSx SINE Alu 0 331 3 14631 152 31 12 chr5 82939564 82940278 -116689872 + L1MA2 LINE L1 7024 7723 0 1466 239 55 31 chr5 82940320 82940705 -116689445 - L1M3c LINE L1 -5745 396 3 520 309 24 0 chr5 82940716 82940884 -116689266 - MLT1J LTR MaLR -339 172 1 25 65 0 0 chr5 82940946 82940992 -116689158 + AT_rich Low_complexity Low_complexity 1 46 0 2321 99 0 10 chr5 82941145 82941457 -116688693 - AluSc SINE Alu 0 309 1 1215 67 11 11 chr5 82941457 82941463 -116688687 + (TTTC)n Simple_repeat Simple_repeat 1 186 0 1215 67 11 11 chr5 82941463 82941643 -116688507 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2002 147 3 7 chr5 82941681 82941988 -116688162 - AluSx SINE Alu -6 306 1 300 158 0 0 chr5 82942043 82942100 -116688050 + T-rich Low_complexity Low_complexity 2 58 0 261 264 104 25 chr5 82942135 82942298 -116687852 - L1MC/D LINE L1 -1980 5828 5653 245 87 0 22 chr5 82942541 82942587 -116687563 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 1785 157 3 3 chr5 82942589 82942882 -116687268 - AluSx SINE Alu -19 293 1 784 280 125 2 chr5 82942925 82943357 -116686793 - L1MC4 LINE L1 -3 8039 7555 36 0 0 0 chr5 82945731 82945767 -116684383 + AT_rich Low_complexity Low_complexity 1 36 0 2100 102 3 3 chr5 82945767 82946052 -116684098 - AluY SINE Alu -26 285 1 * 2431 109 0 0 chr5 82946051 82946362 -116683788 - AluSx SINE Alu -1 311 1 386 339 49 27 chr5 82946830 82947054 -116683096 + MIR SINE MIR 20 248 -14 28 48 0 0 chr5 82947296 82947338 -116682812 + AT_rich Low_complexity Low_complexity 1 42 0 29 47 0 0 chr5 82947460 82947503 -116682647 + AT_rich Low_complexity Low_complexity 1 43 0 2015 137 7 13 chr5 82947532 82947832 -116682318 - AluSx SINE Alu -14 298 1 2194 216 138 21 chr5 82947937 82949011 -116681139 + L1ME3 LINE L1 4931 6156 -6 2113 138 0 3 chr5 82949078 82949375 -116680775 - AluSx SINE Alu -16 296 1 233 200 0 0 chr5 82949429 82949437 -116680713 + (TA)n Simple_repeat Simple_repeat 1 8 -47 2131 107 0 7 chr5 82949437 82949726 -116680424 + AluSg SINE Alu 1 287 -23 233 200 0 0 chr5 82949726 82949772 -116680378 + (TA)n Simple_repeat Simple_repeat 7 55 0 218 287 148 0 chr5 82950634 82950742 -116679408 - L2 LINE L2 -238 3034 2911 2555 78 0 0 chr5 82951027 82951335 -116678815 + AluSg SINE Alu 1 308 -2 6227 132 24 4 chr5 82951610 82951967 -116678183 - L1PB1 LINE L1 -1 6150 5802 213 39 0 0 chr5 82951967 82951993 -116678157 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 369 0 0 0 chr5 82951992 82952033 -116678117 + (TA)n Simple_repeat Simple_repeat 2 42 0 6227 132 24 4 chr5 82951993 82953229 -116676921 - L1PB1 LINE L1 -349 5802 4567 825 121 73 0 chr5 82953314 82953438 -116676712 + FLAM_C SINE Alu 1 133 0 573 159 0 0 chr5 82953941 82954029 -116676121 + FLAM_A SINE Alu 1 88 -54 280 351 190 9 chr5 82954649 82954965 -116675185 - L3 LINE CR1 -149 1428 1056 2309 191 62 11 chr5 82955120 82955619 -116674531 + MER54A LTR ERVL 80 899 -2 360 325 58 0 chr5 82955637 82955791 -116674359 - L3 LINE CR1 -708 869 707 1853 109 4 0 chr5 82955818 82956066 -116674084 + AluSx SINE Alu 59 307 -5 2294 113 0 0 chr5 82956091 82956391 -116673759 + AluSx SINE Alu 1 300 -12 2161 117 7 0 chr5 82956404 82956704 -116673446 + AluSx SINE Alu 1 302 -10 2624 140 10 111 chr5 82956900 82956916 -116673234 - MER74A LTR ERVL 0 558 542 2021 113 70 45 chr5 82956916 82957271 -116672879 + THE1B LTR MaLR 1 364 0 2624 140 10 111 chr5 82957271 82957330 -116672820 - MER74A LTR ERVL -16 542 479 2021 128 18 0 chr5 82957330 82957612 -116672538 + AluSx SINE Alu 1 287 -25 2624 140 10 111 chr5 82957612 82958155 -116671995 - MER74A LTR ERVL -79 479 2 1972 66 14 59 chr5 82958745 82959032 -116671118 - AluY SINE Alu -2 309 36 2194 97 0 42 chr5 82959040 82959212 -116670938 - AluSx SINE Alu -14 298 143 2372 91 0 22 chr5 82959212 82959530 -116670620 - AluSx SINE Alu 0 312 2 2194 97 0 42 chr5 82959530 82959668 -116670482 - AluSx SINE Alu -169 143 1 25 31 0 0 chr5 82960334 82960366 -116669784 + AT_rich Low_complexity Low_complexity 1 32 0 32 0 0 0 chr5 82963423 82963455 -116666695 + AT_rich Low_complexity Low_complexity 1 32 0 1811 143 7 24 chr5 82963473 82963760 -116666390 + AluJo SINE Alu 10 291 -21 32 67 0 0 chr5 82964206 82964266 -116665884 + AT_rich Low_complexity Low_complexity 1 60 0 327 336 219 3 chr5 82964616 82964899 -116665251 - L2 LINE L2 -15 3257 2914 1026 227 89 116 chr5 82964975 82965142 -116665008 + HAL1 LINE L1 8 178 -2329 459 0 0 0 chr5 82965142 82965193 -116664957 + (TG)n Simple_repeat Simple_repeat 1 51 0 1026 227 89 116 chr5 82965193 82965713 -116664437 + HAL1 LINE L1 178 676 -1831 458 256 70 65 chr5 82965913 82966112 -116664038 + HAL1 LINE L1 771 970 -1537 26 0 0 0 chr5 82966187 82966213 -116663937 + AT_rich Low_complexity Low_complexity 1 26 0 810 167 0 0 chr5 82967269 82967401 -116662749 - FLAM_C SINE Alu -1 132 1 2374 98 3 0 chr5 82967790 82968095 -116662055 - AluSp SINE Alu -7 306 1 297 304 32 16 chr5 82968567 82968692 -116661458 + MIR SINE MIR 57 183 -79 26 0 0 0 chr5 82969154 82969180 -116660970 + AT_rich Low_complexity Low_complexity 1 26 0 323 327 102 45 chr5 82969190 82969523 -116660627 + HAL1 LINE L1 110 461 -2046 2437 92 0 3 chr5 82970428 82970742 -116659408 + AluSq SINE Alu 1 313 0 296 226 133 13 chr5 82970929 82971080 -116659070 + MIR SINE MIR 12 185 -62 262 239 56 0 chr5 82971224 82971295 -116658855 - MER5A DNA MER1_type -4 185 111 333 0 0 0 chr5 82971980 82972017 -116658133 + (CA)n Simple_repeat Simple_repeat 2 38 0 252 0 0 0 chr5 82972016 82972044 -116658106 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 2225 118 0 6 chr5 82974025 82974339 -116655811 - AluSx SINE Alu 0 312 1 1991 138 3 3 chr5 82974771 82975062 -116655088 + AluSx SINE Alu 1 291 -21 1905 234 113 2 chr5 82975077 82975589 -116654561 - L1ME3A LINE L1 -61 6109 5541 1957 187 30 98 chr5 82975591 82976131 -116654019 - MLT1D LTR MaLR -2 503 1 2224 112 0 26 chr5 82977070 82977374 -116652776 + AluSx SINE Alu 1 296 -16 389 194 0 0 chr5 82977545 82977612 -116652538 - L1PB4 LINE L1 -77 6079 6013 1118 206 5 9 chr5 82977666 82977884 -116652266 + L1PB4 LINE L1 5931 6147 -9 467 296 46 0 chr5 82977948 82978100 -116652050 + HAL1 LINE L1 202 360 -2147 3775 215 102 37 chr5 82978115 82979331 -116650819 + L1MB8 LINE L1 4029 5164 -1014 2113 140 0 0 chr5 82979331 82979631 -116650519 + AluJb SINE Alu 1 300 -12 3775 215 102 37 chr5 82979631 82980091 -116650059 + L1MB8 LINE L1 5164 5593 -585 2371 90 7 0 chr5 82980091 82980391 -116649759 + AluSq SINE Alu 1 302 -11 3775 215 102 37 chr5 82980391 82980718 -116649432 + L1MB8 LINE L1 5593 6173 -5 651 281 106 0 chr5 82980725 82980981 -116649169 + HAL1 LINE L1 348 630 -1877 703 262 76 33 chr5 82981005 82981280 -116648870 + HAL1 LINE L1 740 1026 -1481 2173 79 0 8 chr5 82981313 82981578 -116648572 - AluSg SINE Alu -32 278 16 18955 49 3 28 chr5 82981786 82984722 -116645428 - L1PA5 LINE L1 -323 5831 2969 308 200 105 53 chr5 82984838 82985000 -116645150 - AluS SINE Alu -218 85 1 1687 126 115 15 chr5 82985034 82985304 -116644846 + AluSx SINE Alu 1 297 -15 613 173 4 47 chr5 82985527 82985813 -116644337 + GA-rich Low_complexity Low_complexity 1 273 0 1619 268 49 12 chr5 82985821 82986415 -116643735 + HAL1 LINE L1 1140 1755 -752 8002 47 6 32 chr5 82986672 82987833 -116642317 - L1PA5 LINE L1 0 6154 5036 2935 3 0 0 chr5 82987833 82988142 -116642008 - AluYa5 SINE Alu -2 309 1 8002 47 6 32 chr5 82988142 82988807 -116641343 - L1PA5 LINE L1 -1118 5036 4355 279 151 0 96 chr5 82989031 82989104 -116641046 - L1M4 LINE L1 -660 5514 5449 2131 127 0 10 chr5 82989110 82989417 -116640733 - AluSx SINE Alu -8 304 1 2299 101 0 7 chr5 82989425 82989733 -116640417 - AluSg SINE Alu -4 306 1 511 266 14 85 chr5 82989884 82990166 -116639984 + HAL1 LINE L1 2245 2506 -1 207 204 0 0 chr5 82990207 82990251 -116639899 + (CA)n Simple_repeat Simple_repeat 2 45 0 948 235 17 29 chr5 82990253 82990491 -116639659 + MER8 DNA MER2_type 3 237 -2 378 197 13 0 chr5 82990511 82990587 -116639563 + L1MC4 LINE L1 7919 7995 -47 2183 124 3 0 chr5 82990587 82990886 -116639264 - AluSx SINE Alu -12 300 1 454 255 137 20 chr5 82990919 82991072 -116639078 - MIR SINE MIR -18 244 74 1991 161 117 8 chr5 82991329 82991715 -116638435 + MSTA LTR MaLR 1 428 0 1408 86 0 0 chr5 82992101 82992275 -116637875 - AluSp SINE Alu -10 303 130 311 244 215 12 chr5 82992377 82992549 -116637601 - L1ME4a LINE L1 -130 5991 5785 1884 142 0 21 chr5 82992668 82992957 -116637193 - AluJo SINE Alu -29 283 1 1392 180 48 18 chr5 82993842 82994114 -116636036 + AluJo SINE Alu 13 292 -20 330 252 48 61 chr5 82994883 82994999 -116635151 + MIR SINE MIR 74 189 -73 1842 131 35 7 chr5 82994999 82995157 -116634993 - AluJo SINE Alu -22 290 119 207 0 0 0 chr5 82995157 82995180 -116634970 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1842 131 35 7 chr5 82995180 82995303 -116634847 - AluJo SINE Alu -193 119 1 330 252 48 61 chr5 82995303 82995333 -116634817 + MIR SINE MIR 189 218 -44 412 252 196 18 chr5 82995655 82995985 -116634165 + MLT1J1 LTR MaLR 103 446 0 2003 151 0 25 chr5 82996223 82996541 -116633609 + AluSx SINE Alu 1 310 -2 1300 134 0 26 chr5 82996554 82996691 -116633459 + AluJo SINE Alu 1 133 -179 2370 97 0 0 chr5 82996691 82996990 -116633160 + AluSg SINE Alu 1 299 -11 1300 134 0 26 chr5 82996990 82997046 -116633104 + AluJo SINE Alu 133 189 -123 405 123 0 0 chr5 82997046 82997111 -116633039 + Alu SINE Alu 244 308 -4 1753 191 36 18 chr5 82998273 82998608 -116631542 + MER58B DNA MER1_type 1 341 0 359 306 72 86 chr5 82998804 82999095 -116631055 - L2 LINE L2 -7 3265 2979 325 218 51 0 chr5 82999103 82999181 -116630969 + MLT1J LTR MaLR 413 494 -17 1334 199 75 25 chr5 82999181 82999462 -116630688 - AluJb SINE Alu -7 295 1 2597 48 0 16 chr5 83000042 83000357 -116629793 + AluY SINE Alu 2 311 0 2293 106 3 0 chr5 83000369 83000672 -116629478 + AluSq SINE Alu 1 304 -9 2078 125 0 7 chr5 83000682 83000986 -116629164 + AluSp SINE Alu 1 302 -11 274 185 74 0 chr5 83001292 83001346 -116628804 + LTR67 LTR ERVL 2 59 -498 303 133 0 0 chr5 83001442 83001487 -116628663 + Alu SINE Alu 235 279 -23 1004 209 0 36 chr5 83001782 83002002 -116628148 - AluJo SINE Alu -16 296 85 494 85 0 0 chr5 83002002 83002061 -116628089 - AluY SINE Alu -62 249 191 1179 58 7 0 chr5 83002061 83002200 -116627950 - AluYa5 SINE Alu -171 140 1 460 335 7 0 chr5 83002564 83002708 -116627442 - MIR3 SINE MIR -18 190 45 1818 161 3 10 chr5 83003032 83003331 -116626819 - AluJo SINE Alu -15 297 1 24 0 0 0 chr5 83003338 83003362 -116626788 + AT_rich Low_complexity Low_complexity 1 24 0 2024 129 76 22 chr5 83004063 83004419 -116625731 + THE1C LTR MaLR 1 375 0 2095 125 6 6 chr5 83005007 83005318 -116624832 - AluSx SINE Alu -1 311 1 1149 135 5 16 chr5 83005935 83006120 -116624030 - AluSc SINE Alu -8 301 119 739 164 0 0 chr5 83006398 83006520 -116623630 + AluSg/x SINE Alu 145 266 -46 2412 172 21 11 chr5 83006520 83006955 -116623195 + MER65C LTR ERV1 23 461 0 440 297 96 36 chr5 83007207 83007426 -116622724 - MIR SINE MIR -6 256 25 2296 93 3 0 chr5 83007653 83007953 -116622197 - AluSg SINE Alu -9 301 1 885 180 21 36 chr5 83007965 83008159 -116621991 - L1MB7 LINE L1 -1 6183 5993 181 211 0 0 chr5 83008402 83008440 -116621710 + L2 LINE L2 3221 3258 -14 981 196 129 85 chr5 83009078 83009172 -116620978 + MLT2C1 LTR ERVL 19 107 -290 1234 141 184 24 chr5 83009172 83009427 -116620723 - AluSg1 SINE Alu -13 296 1 981 196 129 85 chr5 83009427 83009695 -116620455 + MLT2C1 LTR ERVL 107 397 0 2549 118 30 3 chr5 83009826 83010191 -116619959 + THE1C LTR MaLR 1 375 0 1461 105 27 133 chr5 83010907 83011040 -116619110 + AluSx SINE Alu 31 176 -136 1867 126 11 0 chr5 83011040 83011302 -116618848 + AluSx SINE Alu 1 265 -47 1648 80 13 0 chr5 83011308 83011532 -116618618 + AluSg/x SINE Alu 81 307 -3 1461 105 27 133 chr5 83011532 83011685 -116618465 + AluSx SINE Alu 181 293 -19 1200 142 15 29 chr5 83012044 83012248 -116617902 - AluJb SINE Alu -25 287 87 257 238 175 0 chr5 83012387 83012467 -116617683 - MER5A DNA MER1_type 0 189 96 338 263 147 42 chr5 83012856 83013046 -116617104 - HAL1 LINE L1 -2 2505 2296 * 482 241 193 37 chr5 83013032 83013468 -116616682 - HAL1 LINE L1 0 2507 2004 670 198 8 0 chr5 83013526 83013647 -116616503 - FLAM_A SINE Alu -11 122 1 988 210 62 4 chr5 83013705 83013949 -116616201 - HAL1 LINE L1 -726 1781 1520 1670 165 55 0 chr5 83013949 83014221 -116615929 - AluJb SINE Alu -25 287 1 988 210 62 4 chr5 83014221 83014233 -116615917 - HAL1 LINE L1 -987 1520 1510 400 243 150 14 chr5 83014290 83014430 -116615720 + L2 LINE L2 2489 2647 -667 22 0 0 0 chr5 83014432 83014454 -116615696 + AT_rich Low_complexity Low_complexity 1 22 0 1992 117 7 27 chr5 83014512 83014812 -116615338 + AluSq SINE Alu 2 295 -18 355 308 77 16 chr5 83015013 83015195 -116614955 + LTR16C LTR ERVL 299 491 0 374 291 103 23 chr5 83015205 83015380 -116614770 - L1ME LINE L1 -356 5765 5577 22 0 0 0 chr5 83015762 83015784 -116614366 + AT_rich Low_complexity Low_complexity 1 22 0 13435 150 33 5 chr5 83016247 83019747 -116610403 + L1MA3 LINE L1 2706 6298 -7 1182 69 0 14 chr5 83019754 83019898 -116610252 - AluSq/x SINE Alu -165 147 6 21 0 0 0 chr5 83019902 83019923 -116610227 + AT_rich Low_complexity Low_complexity 1 21 0 919 115 0 0 chr5 83019923 83020053 -116610097 - L1PB1 LINE L1 -1 6150 6021 351 0 0 0 chr5 83020958 83020997 -116609153 + (CA)n Simple_repeat Simple_repeat 2 40 0 22 70 0 0 chr5 83021054 83021097 -116609053 + AT_rich Low_complexity Low_complexity 1 43 0 1493 191 58 0 chr5 83021167 83021444 -116608706 + Tigger7 DNA MER2_type 7 299 -2188 2436 83 3 0 chr5 83021452 83021754 -116608396 + AluSp SINE Alu 1 303 -10 696 175 187 6 chr5 83021767 83021933 -116608217 - MER58A DNA MER1_type -8 216 21 1920 150 0 0 chr5 83022259 83022545 -116607605 - AluSx SINE Alu -13 299 14 336 137 0 0 chr5 83022721 83022785 -116607365 + Alu SINE Alu 1 47 -255 520 126 36 12 chr5 83022919 83023086 -116607064 + (TA)n Simple_repeat Simple_repeat 2 172 0 358 217 0 0 chr5 83023394 83023463 -116606687 - MLT1K LTR MaLR -1 587 519 2136 138 3 0 chr5 83023469 83023767 -116606383 + AluSx SINE Alu 1 299 -13 2189 100 13 19 chr5 83023905 83024216 -116605934 + AluSg SINE Alu 1 309 -1 357 331 29 17 chr5 83024629 83024801 -116605349 + LTR16C LTR ERVL 313 486 -5 210 37 0 0 chr5 83024801 83024828 -116605322 + (TA)n Simple_repeat Simple_repeat 2 28 0 1102 202 152 65 chr5 83026162 83026298 -116603852 + MLT1A1 LTR MaLR 1 124 -241 2310 93 0 26 chr5 83026298 83026611 -116603539 + AluSq SINE Alu 1 305 -8 1102 202 152 65 chr5 83026611 83026810 -116603340 + MLT1A1 LTR MaLR 124 365 0 710 226 28 123 chr5 83027144 83027617 -116602533 - HAL1 LINE L1 -1136 1371 944 668 309 84 44 chr5 83027691 83027989 -116602161 - MLT1K LTR MaLR -263 325 16 233 366 181 4 chr5 83028066 83028347 -116601803 - L3 LINE CR1 -115 1462 1132 2243 56 4 4 chr5 83028552 83028820 -116601330 + L1PA3 LINE L1 5883 6150 -5 349 176 33 121 chr5 83028866 83028957 -116601193 + MER5B DNA MER1_type 48 130 -48 1295 54 78 0 chr5 83028979 83029145 -116601005 - AluY SINE Alu -132 179 1 328 194 48 0 chr5 83029145 83029207 -116600943 + MER5B DNA MER1_type 114 178 0 1467 184 69 160 chr5 83030062 83030515 -116599635 - MLT2B1 LTR ERVL -2 518 119 930 196 6 18 chr5 83030515 83030683 -116599467 + FRAM SINE Alu 1 166 0 1467 184 69 160 chr5 83030683 83030793 -116599357 - MLT2B1 LTR ERVL -401 119 1 2310 244 95 13 chr5 83030796 83031344 -116598806 - MLT1E LTR MaLR 0 593 1 508 251 149 34 chr5 83031347 83031670 -116598480 - L1MC4 LINE L1 -69 7973 7614 2029 228 116 14 chr5 83031771 83032062 -116598088 + L1ME3 LINE L1 4217 4477 -1669 1533 179 127 4 chr5 83032062 83032330 -116597820 + AluJo SINE Alu 2 302 0 2029 228 116 14 chr5 83032330 83032695 -116597455 + L1ME3 LINE L1 4477 4940 -1206 2233 155 23 26 chr5 83032697 83033098 -116597052 + MSTB1 LTR MaLR 1 335 -30 379 42 21 0 chr5 83033237 83033285 -116596865 + MSTB1 LTR MaLR 384 432 0 3161 203 67 48 chr5 83033301 83033678 -116596472 + L1ME3 LINE L1 4957 5325 -837 2426 152 59 27 chr5 83033678 83034087 -116596063 - MSTA LTR MaLR -2 426 5 3161 203 67 48 chr5 83034087 83034516 -116595634 + L1ME3 LINE L1 5325 5744 -418 2235 109 0 13 chr5 83034516 83034819 -116595331 - AluSx SINE Alu -13 299 1 3161 203 67 48 chr5 83034819 83034985 -116595165 + L1ME3 LINE L1 5744 5905 -257 579 29 0 0 chr5 83034985 83035054 -116595096 + (TA)n Simple_repeat Simple_repeat 2 70 0 3161 203 67 48 chr5 83035054 83035246 -116594904 + L1ME3 LINE L1 5905 6162 0 590 193 156 11 chr5 83035319 83035553 -116594597 - L1ME3A LINE L1 -151 6011 5722 2081 109 16 26 chr5 83035585 83035889 -116594261 - AluSp SINE Alu -6 307 7 207 0 0 0 chr5 83035904 83035927 -116594223 + (A)n Simple_repeat Simple_repeat 1 23 0 320 258 105 24 chr5 83035948 83036072 -116594078 - L1MC5 LINE L1 -567 7394 7261 473 185 58 46 chr5 83036136 83036309 -116593841 - L1ME3A LINE L1 -2374 5434 5260 2009 121 20 7 chr5 83036687 83036985 -116593165 - MSTC LTR MaLR -6 422 121 616 184 0 0 chr5 83038622 83038731 -116591419 + MLT2C1 LTR ERVL 1 109 -288 2733 174 27 6 chr5 83038735 83039222 -116590928 - MER39 LTR ERV1 0 707 211 249 93 67 147 chr5 83039224 83039260 -116590890 + MLT2C2 LTR ERVL 426 424 -40 234 0 0 0 chr5 83039260 83039286 -116590864 + (TA)n Simple_repeat Simple_repeat 2 27 0 249 93 67 147 chr5 83039286 83039324 -116590826 + MLT2C2 LTR ERVL 423 462 -2 1347 84 0 0 chr5 83039349 83039516 -116590634 - AluSp SINE Alu -13 300 134 1891 145 0 20 chr5 83040064 83040360 -116589790 - AluJo SINE Alu -22 290 1 1111 201 113 20 chr5 83040677 83040970 -116589180 + MLT1J2 LTR MaLR 1 320 -130 565 148 89 0 chr5 83041014 83041115 -116589035 + FLAM_A SINE Alu 33 142 0 429 240 10 0 chr5 83041129 83041229 -116588921 + MLT1J1 LTR MaLR 346 446 0 2196 123 0 0 chr5 83041738 83042038 -116588112 + AluSq SINE Alu 1 300 -13 251 248 264 24 chr5 83042324 83042449 -116587701 + MLT1L LTR MaLR 5 159 -456 296 226 155 12 chr5 83042472 83042556 -116587594 + MER5B DNA MER1_type 83 178 0 401 241 72 49 chr5 83042593 83042796 -116587354 + MLT1L LTR MaLR 111 383 -232 297 0 0 0 chr5 83042826 83042859 -116587291 + (CAAT)n Simple_repeat Simple_repeat 2 34 0 228 286 0 16 chr5 83042878 83042941 -116587209 + MLT1L LTR MaLR 552 613 -2 2264 117 0 3 chr5 83043387 83043696 -116586454 + AluSx SINE Alu 1 308 -4 2207 155 24 42 chr5 83043882 83044193 -116585957 + THE1C LTR MaLR 2 306 -69 2314 74 0 10 chr5 83044193 83044516 -116585634 + AluY SINE Alu 1 311 0 2207 155 24 42 chr5 83044516 83044585 -116585565 + THE1C LTR MaLR 306 375 0 250 170 115 9 chr5 83044758 83044829 -116585321 + L1ME2 LINE L1 5751 5826 -357 987 249 67 11 chr5 83044945 83045214 -116584936 + MER93b LTR ERV1 90 373 0 1299 195 102 22 chr5 83045214 83045537 -116584613 + L1ME2 LINE L1 5802 6150 -14 245 273 62 45 chr5 83045566 83045765 -116584385 + L1MC4 LINE L1 7836 8037 -5 1673 115 25 118 chr5 83046523 83046686 -116583464 + AluSx SINE Alu 1 178 -134 1867 126 11 0 chr5 83046686 83046948 -116583202 + AluSx SINE Alu 1 265 -47 1640 81 14 0 chr5 83046954 83047177 -116582973 + AluSg/x SINE Alu 81 306 -4 1673 115 25 118 chr5 83047177 83047329 -116582821 + AluSx SINE Alu 183 293 -19 1200 142 15 29 chr5 83047688 83047892 -116582258 - AluJb SINE Alu -25 287 87 257 238 175 0 chr5 83048031 83048111 -116582039 - MER5A DNA MER1_type 0 189 96 369 270 148 37 chr5 83048504 83048693 -116581457 - HAL1 LINE L1 -2 2505 2296 * 436 270 175 29 chr5 83048679 83049135 -116581015 - HAL1 LINE L1 0 2507 1985 670 198 8 0 chr5 83049178 83049299 -116580851 - FLAM_A SINE Alu -11 122 1 981 213 66 0 chr5 83049357 83049601 -116580549 - HAL1 LINE L1 -726 1781 1522 1641 169 55 0 chr5 83049601 83049873 -116580277 - AluJb SINE Alu -25 287 1 400 243 150 14 chr5 83049942 83050082 -116580068 + L2 LINE L2 2489 2647 -667 22 0 0 0 chr5 83050084 83050106 -116580044 + AT_rich Low_complexity Low_complexity 1 22 0 1992 117 7 27 chr5 83050164 83050464 -116579686 + AluSq SINE Alu 2 295 -18 338 313 77 16 chr5 83050665 83050847 -116579303 + LTR16C LTR ERVL 299 491 0 374 291 103 23 chr5 83050857 83051032 -116579118 - L1ME LINE L1 -356 5765 5577 22 0 0 0 chr5 83051414 83051436 -116578714 + AT_rich Low_complexity Low_complexity 1 22 0 2073 112 4 0 chr5 83052224 83052501 -116577649 + AluSx SINE Alu 1 278 -34 2142 66 0 0 chr5 83052596 83052853 -116577297 - AluY SINE Alu -7 304 48 2261 97 3 19 chr5 83053229 83053540 -116576610 + AluSx SINE Alu 1 306 -6 3315 210 102 21 chr5 83054653 83055587 -116574563 + L1M4 LINE L1 3535 4543 -1603 2201 98 7 10 chr5 83055587 83055884 -116574266 - AluSx SINE Alu -11 301 6 919 115 0 0 chr5 83055907 83056037 -116574113 - L1PB1 LINE L1 -1 6150 6021 243 0 0 0 chr5 83056942 83056969 -116573181 + (CA)n Simple_repeat Simple_repeat 2 28 0 22 70 0 0 chr5 83057025 83057068 -116573082 + AT_rich Low_complexity Low_complexity 1 43 0 1491 185 46 0 chr5 83057138 83057397 -116572753 + Tigger7 DNA MER2_type 7 277 -2210 2414 86 3 0 chr5 83057423 83057724 -116572426 + AluSp SINE Alu 1 302 -11 664 187 187 6 chr5 83057737 83057903 -116572247 - MER58A DNA MER1_type -8 216 21 1968 150 0 0 chr5 83058233 83058526 -116571624 - AluSx SINE Alu -6 306 14 2271 84 0 40 chr5 83058718 83059040 -116571110 + AluY SINE Alu 1 309 -2 1557 96 108 8 chr5 83059288 83059525 -116570625 + L1MA8 LINE L1 6001 6268 -23 288 0 0 0 chr5 83059525 83059557 -116570593 + (TA)n Simple_repeat Simple_repeat 2 33 0 1557 96 108 8 chr5 83059557 83059579 -116570571 + L1MA8 LINE L1 6268 6286 -5 1629 179 55 0 chr5 83059587 83059877 -116570273 + AluJo SINE Alu 1 306 -6 757 167 65 70 chr5 83060473 83060688 -116569462 + L1ME2 LINE L1 5951 6164 0 189 0 0 0 chr5 83060711 83060732 -116569418 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 2264 82 0 0 chr5 83060735 83061017 -116569133 - AluY SINE Alu -29 282 1 1406 120 69 9 chr5 83061426 83061643 -116568507 + MER30 DNA MER1_type 1 230 0 2170 107 0 7 chr5 83062261 83062551 -116567599 + AluSg SINE Alu 1 288 -22 407 289 78 8 chr5 83063027 83063155 -116566995 - MIR SINE MIR -103 159 23 13694 128 75 18 chr5 83063511 83064124 -116566026 + Tigger1 DNA MER2_type 24 601 -1817 2327 70 3 32 chr5 83064124 83064436 -116565714 + AluY SINE Alu 1 303 -8 13694 128 75 18 chr5 83064436 83065431 -116564719 + Tigger1 DNA MER2_type 601 1801 -617 2301 77 7 3 chr5 83065431 83065730 -116564420 + AluY SINE Alu 1 300 -11 13694 128 75 18 chr5 83065730 83066383 -116563767 + Tigger1 DNA MER2_type 1801 2415 -3 245 182 0 0 chr5 83066400 83066444 -116563706 + L1ME LINE L1 5777 5820 -301 222 281 146 0 chr5 83066545 83066641 -116563509 - L2 LINE L2 -4 3309 3200 1969 112 0 4 chr5 83066950 83067217 -116562933 + AluSx SINE Alu 1 266 -46 2412 168 23 11 chr5 83067217 83067651 -116562499 + MER65C LTR ERV1 23 461 0 416 294 101 37 chr5 83067904 83068122 -116562028 - MIR SINE MIR -6 256 25 2228 98 3 3 chr5 83068349 83068645 -116561505 - AluSg SINE Alu -14 296 1 898 176 21 31 chr5 83068657 83068850 -116561300 - L1MB7 LINE L1 -1 6183 5993 181 211 0 0 chr5 83069094 83069132 -116561018 + L2 LINE L2 3221 3258 -14 965 204 127 83 chr5 83069770 83069864 -116560286 + MLT2C1 LTR ERVL 19 107 -290 1234 141 184 24 chr5 83069864 83070119 -116560031 - AluSg1 SINE Alu -13 296 1 965 204 127 83 chr5 83070119 83070387 -116559763 + MLT2C1 LTR ERVL 107 397 0 2542 118 30 3 chr5 83070518 83070883 -116559267 + THE1C LTR MaLR 1 375 0 1033 153 0 0 chr5 83071824 83071974 -116558176 + MER6A DNA MER2_type 32 181 -424 * 1465 118 22 4 chr5 83071970 83072198 -116557952 + MER6A DNA MER2_type 371 602 -3 1701 196 51 20 chr5 83074801 83075153 -116554997 - MLT1A1 LTR MaLR -2 363 1 2934 169 39 7 chr5 83076885 83077422 -116552728 - MER68 LTR ERV1 -8 554 1 2147 89 4 7 chr5 83077670 83077951 -116552199 - AluSx SINE Alu -32 280 1 2201 104 3 3 chr5 83078197 83078485 -116551665 - AluSx SINE Alu -24 288 1 225 273 106 0 chr5 83078739 83078805 -116551345 + L2 LINE L2 3225 3297 -16 388 229 76 8 chr5 83078847 83078965 -116551185 - MARNA DNA Mariner -226 360 235 818 125 17 0 chr5 83079803 83079923 -116550227 - AluJb SINE Alu -190 122 1 281 269 122 55 chr5 83079928 83080166 -116549984 + L1M4 LINE L1 4733 4986 -1160 4187 155 84 53 chr5 83080269 83081290 -116548860 - L1MDa LINE L1 -4172 2368 1316 2179 105 6 19 chr5 83081290 83081603 -116548547 - AluSq SINE Alu -4 309 1 207 0 0 0 chr5 83081829 83081852 -116548298 + (T)n Simple_repeat Simple_repeat 1 23 0 1965 63 8 4 chr5 83081985 83082239 -116547911 + AluY SINE Alu 48 302 -9 1393 218 49 7 chr5 83082246 83082553 -116547597 - MER63B DNA MER1_type -106 330 11 180 77 0 0 chr5 83082888 83082914 -116547236 + (C)n Simple_repeat Simple_repeat 1 26 0 1863 107 0 4 chr5 83083406 83083669 -116546481 + AluY SINE Alu 50 311 0 2116 112 0 0 chr5 83083755 83084033 -116546117 - AluSx SINE Alu -34 278 1 774 180 16 0 chr5 83084516 83084644 -116545506 + AluJb SINE Alu 176 305 -7 321 295 164 29 chr5 83084686 83084893 -116545257 + MIR SINE MIR 8 242 -20 336 203 14 14 chr5 83085351 83085425 -116544725 + MIR SINE MIR 79 152 -110 212 338 25 12 chr5 83085538 83085618 -116544532 - MIR SINE MIR -90 172 92 1173 129 11 0 chr5 83086862 83087040 -116543110 + THE1C LTR MaLR 196 375 0 1033 153 0 0 chr5 83087981 83088131 -116542019 + MER6A DNA MER2_type 32 181 -424 * 1448 119 22 4 chr5 83088127 83088353 -116541797 + MER6A DNA MER2_type 371 600 -5 443 245 160 25 chr5 83088529 83088551 -116541599 + MIR SINE MIR 4 22 -240 2166 69 0 0 chr5 83088551 83088811 -116541339 + AluY SINE Alu 41 300 -11 443 245 160 25 chr5 83088811 83088988 -116541162 + MIR SINE MIR 22 230 -32 24 0 0 0 chr5 83090647 83090671 -116539479 + GC_rich Low_complexity Low_complexity 1 24 0 324 246 0 0 chr5 83091196 83091261 -116538889 - MIR SINE MIR -115 93 29 2278 112 3 0 chr5 83093195 83093499 -116536651 + AluSq SINE Alu 1 305 -8 2095 95 3 80 chr5 83094072 83094397 -116535753 - AluSx SINE Alu -12 300 1 1403 197 17 27 chr5 83094635 83094935 -116535215 - AluJo SINE Alu -14 298 2 2200 119 20 56 chr5 83094954 83094991 -116535159 - L1MB8 LINE L1 0 6178 6141 2232 112 0 0 chr5 83094991 83095287 -116534863 + AluSx SINE Alu 1 296 -16 2200 119 20 56 chr5 83095287 83095645 -116534505 - L1MB8 LINE L1 -37 6141 5797 1400 172 0 4 chr5 83095646 83095896 -116534254 - L1MB3 LINE L1 0 6183 5935 243 212 6 0 chr5 83095903 83095968 -116534182 - L1MB3 LINE L1 -338 5826 5760 2477 73 3 91 chr5 83096107 83096233 -116533917 - THE1A LTR MaLR -5 350 214 402 83 0 0 chr5 83096233 83096293 -116533857 - L1PA8 LINE L1 -1 6171 6112 2477 73 3 91 chr5 83096293 83096550 -116533600 - THE1A LTR MaLR -141 214 1 235 115 0 39 chr5 83096721 83096773 -116533377 - L1MEc LINE L1 -4919 1477 1428 2022 97 0 11 chr5 83096869 83097136 -116533014 - AluSg SINE Alu -46 264 1 884 263 56 78 chr5 83097158 83097912 -116532238 - L1MEc LINE L1 -4999 1397 661 427 176 70 56 chr5 83097971 83098068 -116532082 + MER63 DNA MER1_type 770 871 -191 2108 148 17 9 chr5 83098068 83098413 -116531737 + MER7A DNA MER2_type 1 346 0 427 176 70 56 chr5 83098413 83098457 -116531693 + MER63 DNA MER1_type 871 913 -149 832 118 6 71 chr5 83098534 83098589 -116531561 - MER65C LTR ERV1 0 461 404 2341 99 0 0 chr5 83098589 83098883 -116531267 + AluSx SINE Alu 5 298 -14 832 118 6 71 chr5 83098883 83098996 -116531154 - MER65C LTR ERV1 -57 404 304 761 179 0 15 chr5 83098998 83099132 -116531018 + AluJ SINE Alu 2 133 -169 570 167 0 0 chr5 83099132 83099222 -116530928 + AluJ SINE Alu 133 222 -90 1771 150 29 3 chr5 83099223 83099530 -116530620 - MER65C LTR ERV1 -146 315 1 526 130 3 13 chr5 83099836 83099934 -116530216 - MER51A LTR ERV1 -81 553 438 186 318 12 24 chr5 83100233 83100318 -116529832 - L2 LINE L2 -211 3061 2978 1341 242 147 54 chr5 83100349 83101034 -116529116 - HAL1 LINE L1 -1755 752 4 194 340 32 70 chr5 83101496 83101681 -116528469 - MER5B DNA MER1_type 0 178 1 463 296 15 8 chr5 83101965 83102097 -116528053 - MER5B DNA MER1_type -3 175 43 754 208 13 0 chr5 83102101 83102250 -116527900 - FRAM SINE Alu -5 171 21 234 91 0 0 chr5 83102312 83102345 -116527805 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 588 123 57 0 chr5 83103042 83103148 -116527002 + L1PA15 LINE L1 6049 6160 -5 7452 159 111 34 chr5 83103439 83105069 -116525081 - MER52A LTR ERV1 0 1755 1 21 95 0 0 chr5 83105810 83105873 -116524277 + AT_rich Low_complexity Low_complexity 1 63 0 300 312 0 0 chr5 83105962 83106087 -116524063 - L1MC4 LINE L1 -1 8041 7917 2181 120 0 10 chr5 83106885 83107184 -116522966 + AluSx SINE Alu 2 297 -15 270 216 23 23 chr5 83108140 83108228 -116521922 - L1ME3A LINE L1 0 6170 6083 21 71 0 0 chr5 83108247 83108289 -116521861 + AT_rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr5 83108963 83108986 -116521164 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1829 149 3 10 chr5 83109293 83109606 -116520544 + AluJb SINE Alu 1 312 0 841 161 0 14 chr5 83110783 83110926 -116519224 - FLAM_C SINE Alu -2 141 1 25 31 0 0 chr5 83110999 83111031 -116519119 + AT_rich Low_complexity Low_complexity 1 32 0 2052 122 159 24 chr5 83111365 83111742 -116518408 - MSTA LTR MaLR 0 428 1 2296 116 0 0 chr5 83112074 83112377 -116517773 - AluSq SINE Alu -10 303 1 323 333 123 9 chr5 83113034 83113262 -116516888 + L2 LINE L2 2212 2465 -849 791 269 108 11 chr5 83113771 83114143 -116516007 - L1ME3A LINE L1 -235 5935 5528 281 279 0 63 chr5 83114218 83114329 -116515821 + MIR SINE MIR 10 113 -149 387 259 27 18 chr5 83114610 83114722 -116515428 - MIR SINE MIR -73 189 77 694 205 0 8 chr5 83115297 83115424 -116514726 + FLAM_A SINE Alu 1 126 -7 220 385 28 18 chr5 83115694 83115803 -116514347 - L2 LINE L2 -36 3236 3127 2006 110 30 27 chr5 83116026 83116325 -116513825 + AluSx SINE Alu 1 300 -12 262 169 194 48 chr5 83116429 83116553 -116513597 - L1ME4a LINE L1 0 6121 5980 407 235 55 50 chr5 83116675 83116875 -116513275 - L1MC5 LINE L1 -50 7911 7711 709 272 116 25 chr5 83116892 83117212 -116512938 - L1ME4a LINE L1 -325 5796 5448 581 268 0 22 chr5 83117402 83117581 -116512569 + L1ME LINE L1 5560 5734 -387 31 68 0 0 chr5 83117665 83117724 -116512426 + AT_rich Low_complexity Low_complexity 1 59 0 338 181 11 21 chr5 83117747 83117841 -116512309 - Tigger8 DNA MER2_type -365 301 209 701 230 93 20 chr5 83118224 83118428 -116511722 + MIR SINE MIR 7 225 -37 29 0 0 0 chr5 83118455 83118484 -116511666 + AT_rich Low_complexity Low_complexity 1 29 0 1156 103 0 0 chr5 83118488 83118633 -116511517 + AluSg SINE Alu 1 145 -165 12592 155 48 14 chr5 83118640 83122351 -116507799 - L1MA3 LINE L1 -7 6298 2453 1841 93 4 37 chr5 83122351 83122619 -116507531 - AluSx SINE Alu -7 305 47 12592 155 48 14 chr5 83122619 83122695 -116507455 - L1MA3 LINE L1 -3852 2453 2381 22 0 0 0 chr5 83122882 83122904 -116507246 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr5 83125408 83125444 -116504706 + AT_rich Low_complexity Low_complexity 1 36 0 212 75 0 25 chr5 83125772 83125812 -116504338 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 255 116 0 0 chr5 83125812 83125855 -116504295 - L1MC1 LINE L1 -24 6309 6267 1213 180 0 107 chr5 83125965 83126265 -116503885 - AluJo SINE Alu -36 276 9 1958 110 7 38 chr5 83126357 83126671 -116503479 - AluSx SINE Alu 0 305 1 426 215 131 15 chr5 83126842 83126972 -116503178 - MER112 DNA MER1_type -43 217 73 30 83 0 0 chr5 83127039 83127111 -116503039 + AT_rich Low_complexity Low_complexity 1 72 0 519 277 91 19 chr5 83127211 83127586 -116502564 + L1M4 LINE L1 4193 4594 -1552 246 273 61 0 chr5 83127642 83127741 -116502409 + L1M4 LINE L1 4582 4686 -1460 357 164 0 0 chr5 83127786 83127859 -116502291 + (TA)n Simple_repeat Simple_repeat 1 73 0 239 193 0 18 chr5 83127866 83127923 -116502227 + (TATAA)n Simple_repeat Simple_repeat 2 57 0 511 260 6 17 chr5 83127931 83128108 -116502042 + (TATATG)n Simple_repeat Simple_repeat 6 180 0 244 208 21 0 chr5 83128109 83128205 -116501945 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 228 277 0 0 chr5 83128232 83128409 -116501741 + (TATATG)n Simple_repeat Simple_repeat 1 177 0 303 294 35 0 chr5 83128456 83128541 -116501609 + L1MC4 LINE L1 6614 6701 -1341 446 243 0 0 chr5 83128542 83128645 -116501505 + (TA)n Simple_repeat Simple_repeat 1 103 0 353 269 6 0 chr5 83128652 83128823 -116501327 + (TATATG)n Simple_repeat Simple_repeat 6 177 0 530 189 0 43 chr5 83128876 83129061 -116501089 + (TATATG)n Simple_repeat Simple_repeat 1 177 0 303 219 0 16 chr5 83129079 83129143 -116501007 - L1MCa LINE L1 -4358 2068 2006 2125 120 0 10 chr5 83129171 83129463 -116500687 - AluSx SINE Alu -23 289 1 455 298 97 29 chr5 83129468 83129706 -116500444 + L1M4 LINE L1 4733 4986 -1160 7551 180 141 31 chr5 83129811 83130831 -116499319 - L1MDa LINE L1 -4174 2366 1460 2209 117 7 0 chr5 83130831 83131138 -116499012 - AluSq SINE Alu -4 309 1 7551 180 141 31 chr5 83131138 83132231 -116497919 - L1MDa LINE L1 -5080 1460 19 1566 198 28 3 chr5 83133416 83133704 -116496446 - AluJo SINE Alu -17 295 1 350 316 151 36 chr5 83133785 83134063 -116496087 - L2 LINE L2 0 3272 2963 2447 38 10 16 chr5 83134144 83134457 -116495693 + L1PA5 LINE L1 5836 6146 -8 366 291 60 17 chr5 83134558 83134675 -116495475 + L2 LINE L2 3149 3270 -2 2220 121 3 0 chr5 83134778 83135083 -116495067 + AluSx SINE Alu 1 306 -6 21 36 0 0 chr5 83135234 83135262 -116494888 + AT_rich Low_complexity Low_complexity 1 28 0 1923 129 0 4 chr5 83135599 83135871 -116494279 + AluSx SINE Alu 1 271 -41 201 186 23 0 chr5 83136715 83136758 -116493392 + GA-rich Low_complexity Low_complexity 3 46 0 208 345 59 17 chr5 83136802 83136921 -116493229 - MIR SINE MIR -76 186 63 28 0 0 0 chr5 83137574 83137602 -116492548 + AT_rich Low_complexity Low_complexity 1 28 0 311 224 0 0 chr5 83138024 83138082 -116492068 - Charlie5 DNA MER1_type -2554 58 1 26 0 0 0 chr5 83138202 83138228 -116491922 + AT_rich Low_complexity Low_complexity 1 26 0 1853 139 0 0 chr5 83138231 83138505 -116491645 + AluSx SINE Alu 1 274 -38 321 239 44 9 chr5 83138523 83138636 -116491514 - MIR SINE MIR 0 262 146 498 246 241 10 chr5 83140415 83140618 -116489532 + MIR SINE MIR 3 252 -10 342 175 32 0 chr5 83140770 83140833 -116489317 - MER5B DNA MER1_type -4 174 110 335 279 59 22 chr5 83140841 83140977 -116489173 - MER63A DNA MER1_type -6 204 64 1659 183 27 73 chr5 83141064 83141473 -116488677 - MLT1B LTR MaLR 0 390 1 2443 233 67 30 chr5 83142367 83142940 -116487210 - L1ME2 LINE L1 -2 6556 6006 1794 164 0 29 chr5 83142940 83143250 -116486900 + AluJo SINE Alu 1 301 -11 2443 233 67 30 chr5 83143250 83143920 -116486230 - L1ME2 LINE L1 -552 6006 5261 837 136 43 0 chr5 83143954 83144094 -116486056 - AluJo SINE Alu -9 303 158 380 167 0 15 chr5 83144096 83144162 -116485988 - AluJo SINE Alu -177 125 61 2009 144 13 0 chr5 83144276 83144574 -116485576 - AluSx SINE Alu -10 302 1 315 0 0 0 chr5 83144709 83144744 -116485406 + (TG)n Simple_repeat Simple_repeat 2 36 0 2392 55 0 42 chr5 83144837 83145146 -116485004 + AluY SINE Alu 1 296 -15 841 265 36 18 chr5 83145577 83145800 -116484350 - MIR SINE MIR -5 257 31 2192 123 3 0 chr5 83147144 83147453 -116482697 - AluSx SINE Alu -2 310 1 362 222 68 131 chr5 83147872 83148317 -116481833 - L1ME2 LINE L1 -3873 2848 2404 241 313 108 42 chr5 83149293 83149459 -116480691 - MER5A DNA MER1_type -6 183 7 2372 105 0 0 chr5 83149630 83149935 -116480215 - AluSx SINE Alu -7 305 1 251 267 78 43 chr5 83150536 83150652 -116479498 + MIR SINE MIR 31 150 -112 403 231 34 51 chr5 83150699 83150816 -116479334 - L2 LINE L2 0 3313 3199 317 284 25 0 chr5 83150825 83150906 -116479244 - L2 LINE L2 -240 3073 2991 21 57 0 0 chr5 83150912 83150947 -116479203 + AT_rich Low_complexity Low_complexity 1 35 0 2399 108 129 5 chr5 83151048 83151429 -116478721 - MSTA LTR MaLR 0 428 1 700 173 8 0 chr5 83151932 83152059 -116478091 - FLAM_A SINE Alu -1 132 5 4586 147 72 36 chr5 83152096 83152774 -116477376 - L1MA4 LINE L1 -5 6295 5569 1388 188 62 14 chr5 83152774 83153050 -116477100 - AluJo SINE Alu -23 289 1 4586 147 72 36 chr5 83153050 83153364 -116476786 - L1MA4 LINE L1 -731 5569 5268 261 240 67 10 chr5 83153574 83153678 -116476472 - L1ME3 LINE L1 -88 6074 5965 23 0 0 29 chr5 83153776 83153795 -116476355 + AT_rich Low_complexity Low_complexity 1 20 -13 650 207 8 8 chr5 83153795 83153916 -116476234 - FLAM_A SINE Alu -12 121 1 23 0 0 29 chr5 83153916 83153930 -116476220 + AT_rich Low_complexity Low_complexity 20 33 0 685 185 68 102 chr5 83153932 83154256 -116475894 - L1MC5 LINE L1 -440 7521 7209 651 201 46 93 chr5 83154290 83154549 -116475601 - L1MC5 LINE L1 -1002 6959 6713 2399 88 0 0 chr5 83154549 83154845 -116475305 - AluSc SINE Alu -13 296 1 25 0 0 0 chr5 83155106 83155131 -116475019 + AT_rich Low_complexity Low_complexity 1 25 0 923 214 0 0 chr5 83155354 83155527 -116474623 - MER5A DNA MER1_type -2 187 15 331 316 48 5 chr5 83155527 83155714 -116474436 - HAL1b LINE L1 -788 560 366 601 271 67 52 chr5 83156356 83156684 -116473466 - L1ME1 LINE L1 -2 6164 5832 414 258 61 50 chr5 83158262 83158321 -116471829 + L1M4 LINE L1 4547 4604 -1542 1576 148 59 19 chr5 83158321 83158632 -116471518 + AluJb SINE Alu 1 322 0 414 258 61 50 chr5 83158632 83158848 -116471302 + L1M4 LINE L1 4604 4828 -1318 22 56 0 0 chr5 83159016 83159052 -116471098 + AT_rich Low_complexity Low_complexity 1 36 0 1913 138 31 10 chr5 83159265 83159555 -116470595 - AluJb SINE Alu -16 296 1 23 33 0 0 chr5 83159628 83159658 -116470492 + AT_rich Low_complexity Low_complexity 1 30 0 303 235 28 16 chr5 83159689 83159839 -116470311 + L1MB1 LINE L1 5744 5897 -292 2528 74 0 3 chr5 83160431 83160743 -116469407 + AluY SINE Alu 1 311 0 835 146 0 28 chr5 83161221 83161365 -116468785 + FRAM SINE Alu 22 161 -15 1944 147 10 10 chr5 83161968 83162268 -116467882 - AluJo SINE Alu -12 300 1 1475 235 101 21 chr5 83163138 83163805 -116466345 - L2 LINE L2 0 3313 2596 361 323 55 38 chr5 83163816 83164051 -116466099 - L1MC4a LINE L1 -1918 5890 5652 24 67 0 0 chr5 83164279 83164324 -116465826 + AT_rich Low_complexity Low_complexity 1 45 0 2424 54 7 3 chr5 83164632 83164929 -116465221 + AluY SINE Alu 1 298 -13 279 0 0 0 chr5 83164929 83164960 -116465190 + (TG)n Simple_repeat Simple_repeat 2 32 0 180 0 0 0 chr5 83164959 83164979 -116465171 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 325 256 130 14 chr5 83165616 83165814 -116464336 + L1ME3 LINE L1 5734 5947 -215 2362 101 3 3 chr5 83166393 83166701 -116463449 - AluSx SINE Alu -4 308 1 228 273 106 0 chr5 83166955 83167021 -116463129 + L2 LINE L2 3225 3297 -16 346 226 78 9 chr5 83167066 83167181 -116462969 - MARNA DNA Mariner -229 357 235 458 208 10 0 chr5 83167969 83168065 -116462085 + MER20 DNA MER1_type 99 195 -24 911 249 76 9 chr5 83168069 83168410 -116461740 + L1MB7 LINE L1 3661 4024 -2122 3987 185 81 30 chr5 83168429 83169970 -116460180 + L1MB7 LINE L1 4544 6172 -12 516 295 74 15 chr5 83170047 83170318 -116459832 - L1MEc LINE L1 -5776 620 334 258 313 28 28 chr5 83170337 83170516 -116459634 - L1MEc LINE L1 -6182 214 36 2277 109 7 0 chr5 83170601 83170903 -116459247 + AluSx SINE Alu 1 304 -8 1823 145 3 19 chr5 83170903 83171212 -116458938 + AluSx SINE Alu 1 305 -7 2134 92 3 7 chr5 83171441 83171724 -116458426 + AluSx SINE Alu 1 282 -30 2702 169 39 7 chr5 83171970 83172507 -116457643 + MER68 LTR ERV1 1 554 -8 1543 204 48 17 chr5 83174239 83174591 -116455559 + MLT1A1 LTR MaLR 1 363 -2 2338 89 0 16 chr5 83175844 83176158 -116453992 - AluSc SINE Alu 0 309 1 2139 125 0 3 chr5 83176212 83176515 -116453635 - AluSx SINE Alu -10 302 1 2292 110 0 13 chr5 83177504 83177814 -116452336 - AluSx SINE Alu -6 306 1 187 295 16 33 chr5 83178940 83179001 -116451149 + L2 LINE L2 3141 3200 -72 2854 0 0 0 chr5 83179067 83179373 -116450777 + AluY SINE Alu 1 306 -5 262 228 35 0 chr5 83179861 83179918 -116450232 - L2 LINE L2 0 3272 3214 777 241 12 0 chr5 83180662 83180828 -116449322 - MER5B DNA MER1_type 0 178 11 343 148 0 0 chr5 83180838 83180892 -116449258 + L2 LINE L2 3214 3267 -5 362 280 153 13 chr5 83180916 83181066 -116449084 - MIR SINE MIR -64 198 28 207 330 119 0 chr5 83181145 83181254 -116448896 + MIR SINE MIR 67 188 -74 281 315 18 27 chr5 83181257 83181368 -116448782 - MIR SINE MIR -18 244 135 1501 179 127 7 chr5 83183160 83183467 -116446683 + MER7A DNA MER2_type 2 343 -3 378 0 0 0 chr5 83184196 83184238 -116445912 + (CA)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr5 83184528 83184549 -116445601 + AT_rich Low_complexity Low_complexity 1 21 0 1989 162 52 28 chr5 83184589 83185116 -116445034 - MLT2A2 LTR ERVL 0 554 1 5024 147 37 13 chr5 83185116 83185583 -116444567 - L1MA7 LINE L1 -32 6259 5805 306 0 0 0 chr5 83185583 83185617 -116444533 + (TG)n Simple_repeat Simple_repeat 2 35 0 5024 147 37 13 chr5 83185617 83186275 -116443875 - L1MA7 LINE L1 -486 5805 5107 284 301 27 96 chr5 83186322 83186468 -116443682 + L2 LINE L2 2933 3068 -245 1823 108 0 7 chr5 83186565 83186851 -116443299 + HSMAR2 DNA Mariner 1 284 -1018 642 167 0 0 chr5 83186852 83186966 -116443184 + L1P LINE L1 4820 4933 -1213 1660 194 55 3 chr5 83186966 83187333 -116442817 - MLT1C LTR MaLR -81 386 1 25 0 0 0 chr5 83187638 83187663 -116442487 + AT_rich Low_complexity Low_complexity 1 25 0 597 271 111 10 chr5 83187999 83188198 -116441952 + MIR SINE MIR 18 236 -26 270 259 86 25 chr5 83188226 83188388 -116441762 + L1ME LINE L1 5710 5881 -285 25 0 0 0 chr5 83188557 83188582 -116441568 + AT_rich Low_complexity Low_complexity 1 25 0 640 275 80 62 chr5 83189108 83189544 -116440606 - MLT1J1 LTR MaLR 0 446 3 530 288 62 21 chr5 83191068 83191308 -116438842 + L1MEd LINE L1 59 308 -5811 345 279 39 0 chr5 83191400 83191504 -116438646 + L1MEd LINE L1 463 570 -5549 319 125 16 0 chr5 83191641 83191705 -116438445 + L1PB2 LINE L1 6087 6151 0 235 379 0 0 chr5 83191869 83191956 -116438194 + L2 LINE L2 2586 2672 -642 233 289 30 152 chr5 83191993 83192329 -116437821 + L2 LINE L2 2978 3272 0 1579 104 24 0 chr5 83192595 83192846 -116437304 - L1MA3 LINE L1 -2 6303 6047 639 301 111 13 chr5 83193834 83194060 -116436090 - MIR SINE MIR -2 260 13 830 352 55 49 chr5 83194670 83195319 -116434831 - L2 LINE L2 -86 3186 2543 219 167 0 0 chr5 83195688 83195730 -116434420 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 399 198 121 51 chr5 83196113 83196270 -116433880 - MLT1J1 LTR MaLR 0 446 279 611 233 75 0 chr5 83196294 83196453 -116433697 - MLT1J2 LTR MaLR -224 226 56 1786 170 6 63 chr5 83196559 83196923 -116433227 - MER61A LTR ERV1 0 343 1 32 0 0 0 chr5 83197747 83197779 -116432371 + AT_rich Low_complexity Low_complexity 1 32 0 222 118 0 0 chr5 83197926 83197960 -116432190 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 762 91 15 0 chr5 83198235 83198367 -116431783 + (TTTTA)n Simple_repeat Simple_repeat 2 180 0 2200 109 0 0 chr5 83198367 83198651 -116431499 - AluSq SINE Alu -29 284 1 1443 174 85 41 chr5 83199874 83200167 -116429983 - AluJb SINE Alu -6 306 1 1036 198 129 63 chr5 83201131 83201464 -116428686 - HAL1 LINE L1 -575 1932 1578 450 206 80 60 chr5 83201455 83201654 -116428496 - HAL1 LINE L1 -1357 1150 948 * 653 283 117 0 chr5 83201682 83201838 -116428312 - HAL1 LINE L1 -2229 278 142 2329 100 3 0 chr5 83201838 83202147 -116428003 - AluSg SINE Alu 0 310 1 653 283 117 0 chr5 83202147 83202237 -116427913 - HAL1 LINE L1 -2365 142 3 24 53 0 0 chr5 83202386 83202424 -116427726 + AT_rich Low_complexity Low_complexity 1 38 0 203 169 0 51 chr5 83202466 83202525 -116427625 + (TA)n Simple_repeat Simple_repeat 2 57 0 633 307 102 19 chr5 83202550 83203078 -116427072 - L1MC4a LINE L1 -1959 5849 5278 183 339 9 22 chr5 83205805 83205915 -116424235 + MIR SINE MIR 49 212 -50 296 336 130 7 chr5 83205977 83206123 -116424027 - MIR SINE MIR -12 250 87 1671 177 21 0 chr5 83206715 83206997 -116423153 + AluJo SINE Alu 10 297 -15 298 106 15 15 chr5 83207455 83207521 -116422629 + (TATG)n Simple_repeat Simple_repeat 3 68 0 21 0 0 0 chr5 83209225 83209246 -116420904 + AT_rich Low_complexity Low_complexity 1 21 0 2392 103 0 0 chr5 83209261 83209572 -116420578 - AluSx SINE Alu -1 311 1 5562 108 20 14 chr5 83209731 83210613 -116419537 + L1MA3 LINE L1 5418 6305 0 21 0 0 0 chr5 83210823 83210844 -116419306 + AT_rich Low_complexity Low_complexity 1 21 0 2133 117 0 10 chr5 83211395 83211694 -116418456 - AluSx SINE Alu -16 296 1 233 109 62 0 chr5 83212369 83212433 -116417717 + (TA)n Simple_repeat Simple_repeat 1 68 0 1648 130 39 0 chr5 83212433 83212687 -116417463 - AluSx SINE Alu -9 303 40 207 69 0 0 chr5 83213372 83213401 -116416749 + (CCA)n Simple_repeat Simple_repeat 3 31 0 554 256 93 32 chr5 83213409 83213627 -116416523 - MIR SINE MIR -37 225 8 2242 119 0 3 chr5 83214485 83214797 -116415353 - AluSx SINE Alu -1 311 1 842 264 73 45 chr5 83214839 83215055 -116415095 - L1MC4 LINE L1 -60 7982 7773 2149 90 3 45 chr5 83215055 83215367 -116414783 - AluY SINE Alu -12 299 1 842 264 73 45 chr5 83215367 83215615 -116414535 - L1MC4 LINE L1 -269 7773 7505 816 218 101 0 chr5 83215647 83215835 -116414315 + MER63A DNA MER1_type 4 210 0 368 294 124 17 chr5 83215836 83216013 -116414137 - MIR SINE MIR -47 215 20 2053 125 7 3 chr5 83216089 83216386 -116413764 + AluSx SINE Alu 1 298 -14 1193 187 44 4 chr5 83216980 83217205 -116412945 - AluJb SINE Alu -11 301 68 302 67 67 0 chr5 83217585 83217630 -116412520 - L1M LINE L1 -796 5384 5337 * 400 216 65 81 chr5 83217627 83217746 -116412404 + L1ME4a LINE L1 1183 1302 -4817 1989 157 6 23 chr5 83217746 83218096 -116412054 - MER2 DNA MER2_type 0 344 1 400 216 65 81 chr5 83218096 83218151 -116411999 + L1ME4a LINE L1 1302 6117 -2 25 51 0 0 chr5 83218535 83218574 -116411576 + AT_rich Low_complexity Low_complexity 1 39 0 2161 121 0 10 chr5 83219437 83219744 -116410406 + AluSx SINE Alu 6 309 -3 207 0 0 0 chr5 83219747 83219770 -116410380 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr5 83219899 83219922 -116410228 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 1977 86 18 0 chr5 83219923 83220201 -116409949 - L1MA1 LINE L1 -4 6298 6016 316 125 0 0 chr5 83220801 83220849 -116409301 - tRNA-Arg-CGC tRNA tRNA -26 50 3 6482 15 0 44 chr5 83220849 83221649 -116408501 + L1PA3 LINE L1 5380 6144 -11 180 97 0 0 chr5 83221649 83221680 -116408470 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 222 267 139 0 chr5 83221815 83221901 -116408249 + MIR SINE MIR 89 186 -76 346 313 15 53 chr5 83222519 83222650 -116407500 - L2 LINE L2 -9 3263 3138 2027 114 3 27 chr5 83223659 83223956 -116406194 + AluSc SINE Alu 1 290 -19 1913 137 28 0 chr5 83224038 83224322 -116405828 + AluJo SINE Alu 6 297 -15 2229 124 0 0 chr5 83224873 83225172 -116404978 - AluSx SINE Alu -10 302 4 845 299 54 15 chr5 83225358 83225748 -116404402 + L1MC/D LINE L1 5353 5760 -593 6011 178 59 24 chr5 83225827 83227229 -116402921 + Looper DNA T2_type 107 1558 0 1032 199 0 6 chr5 83227757 83227933 -116402217 + FAM SINE Alu 1 175 0 700 312 81 53 chr5 83228808 83229241 -116400909 - L2 LINE L2 -1 3271 2827 1166 218 226 42 chr5 83229360 83229859 -116400291 - MER67B LTR ERV1 0 661 71 373 205 0 39 chr5 83229914 83229992 -116400158 - MER67A LTR ERV1 -454 89 15 465 319 113 32 chr5 83230036 83230604 -116399546 - L2 LINE L2 -2411 903 213 1717 143 94 54 chr5 83230803 83231154 -116398996 - MLT1A1 LTR MaLR 0 365 1 1430 125 134 0 chr5 83231271 83231503 -116398647 + AluSx SINE Alu 37 299 -13 200 100 75 0 chr5 83231698 83231738 -116398412 + CT-rich Low_complexity Low_complexity 1 43 0 448 262 48 157 chr5 83232418 83232895 -116397255 + L2 LINE L2 2846 3270 -2 356 328 35 9 chr5 83234524 83234640 -116395510 + MIR3 SINE MIR 42 160 -48 288 0 0 0 chr5 83235005 83235037 -116395113 + (T)n Simple_repeat Simple_repeat 1 32 0 578 239 86 31 chr5 83235272 83235435 -116394715 + MIR SINE MIR 58 229 -33 674 267 117 33 chr5 83236232 83236798 -116393352 - L2 LINE L2 -18 3295 2614 435 186 12 23 chr5 83237286 83237372 -116392778 - MIR3 SINE MIR -41 167 83 277 143 41 0 chr5 83237629 83237678 -116392472 - L1ME4a LINE L1 -105 6016 5966 428 231 39 0 chr5 83237708 83237838 -116392312 - L1ME4a LINE L1 -213 5908 5774 6568 125 26 14 chr5 83237936 83239743 -116390407 - L1MA3 LINE L1 -10 7714 5889 712 160 0 0 chr5 83239746 83239852 -116390298 + L1M1 LINE L1 1582 1687 -5878 * 3369 132 18 0 chr5 83239850 83240344 -116389806 - L1MA3 LINE L1 -5504 2061 1559 2025 123 27 0 chr5 83241098 83241391 -116388759 - AluSx SINE Alu -11 301 1 1194 297 77 51 chr5 83241396 83241616 -116388534 - L1ME4a LINE L1 -960 5186 4973 2283 74 7 0 chr5 83241616 83241901 -116388249 - AluSp SINE Alu -26 287 1 1194 297 77 51 chr5 83241901 83242379 -116387771 - L1ME4a LINE L1 -1173 4973 4509 4437 156 67 21 chr5 83242379 83242425 -116387725 - MER6 DNA MER2_type 0 865 823 1713 179 40 0 chr5 83242425 83242722 -116387428 + AluJb SINE Alu 1 309 -3 4437 156 67 21 chr5 83242722 83243502 -116386648 - MER6 DNA MER2_type -42 823 1 1194 297 77 51 chr5 83243502 83243977 -116386173 - L1ME4a LINE L1 -1637 4509 3982 225 0 0 0 chr5 83244363 83244388 -116385762 + (TA)n Simple_repeat Simple_repeat 1 25 0 23 54 0 0 chr5 83244593 83244630 -116385520 + AT_rich Low_complexity Low_complexity 1 37 0 222 37 0 0 chr5 83245673 83245700 -116384450 + (TA)n Simple_repeat Simple_repeat 2 28 0 397 251 43 68 chr5 83245818 83246030 -116384120 - L1ME LINE L1 -393 5769 5564 * 800 242 24 5 chr5 83246010 83246375 -116383775 - L1ME LINE L1 -1202 4944 4374 733 170 180 34 chr5 83246397 83246603 -116383547 + MER46A DNA MER2_type 1 236 0 279 277 175 11 chr5 83246603 83246780 -116383370 - L1ME LINE L1 -1794 4352 4147 1126 234 140 11 chr5 83246791 83247256 -116382894 - L1ME LINE L1 -2197 3949 3425 214 260 19 39 chr5 83247398 83247502 -116382648 + T-rich Low_complexity Low_complexity 6 107 0 1667 132 95 0 chr5 83248089 83248362 -116381788 - AluSx SINE Alu -13 299 1 1525 140 136 4 chr5 83249383 83249647 -116380503 + AluJb SINE Alu 1 299 -3 2094 142 3 0 chr5 83249764 83250075 -116380075 - AluSq SINE Alu -1 312 1 195 129 0 0 chr5 83250874 83250905 -116379245 + (A)n Simple_repeat Simple_repeat 1 31 0 277 259 49 90 chr5 83251058 83251316 -116378834 - MLT1L LTR MaLR -170 415 96 363 288 209 45 chr5 83251593 83251923 -116378227 - L2 LINE L2 0 3313 2930 1369 318 102 30 chr5 83252011 83252967 -116377183 - L2 LINE L2 -541 2773 1749 32 26 0 0 chr5 83253052 83253091 -116377059 + AT_rich Low_complexity Low_complexity 1 39 0 1978 215 23 87 chr5 83253204 83253432 -116376718 + L1MC5 LINE L1 7090 7331 -630 2080 110 3 33 chr5 83253432 83253732 -116376418 + AluSx SINE Alu 1 291 -21 1978 215 23 87 chr5 83253732 83254386 -116375764 + L1MC5 LINE L1 7331 7915 -46 318 256 98 0 chr5 83254850 83254932 -116375218 + L1MC4 LINE L1 6614 6703 -1339 303 333 0 0 chr5 83254862 83254952 -116375198 - L1MC4 LINE L1 -1339 6703 6614 * 180 0 0 0 chr5 83254952 83254972 -116375178 + (TG)n Simple_repeat Simple_repeat 2 21 0 2317 88 0 26 chr5 83254986 83255291 -116374859 - AluSq SINE Alu -16 297 1 198 256 23 0 chr5 83255432 83255475 -116374675 - L2 LINE L2 -92 3180 3137 279 355 122 0 chr5 83255956 83256063 -116374087 + L2 LINE L2 3151 3270 -2 349 296 111 25 chr5 83256484 83256646 -116373504 + MIR SINE MIR 87 262 0 575 203 80 31 chr5 83257173 83257336 -116372814 + LTR40c LTR ERVL 7 177 -288 640 188 0 30 chr5 83257405 83257538 -116372612 + LTR40a LTR ERVL 391 519 0 184 327 82 45 chr5 83257591 83257701 -116372449 + MIR3 SINE MIR 4 117 -91 545 280 104 28 chr5 83257734 83257945 -116372205 + MIR SINE MIR 36 262 0 205 368 0 0 chr5 83258031 83258099 -116372051 + MIR SINE MIR 117 184 -78 545 251 11 102 chr5 83259102 83259190 -116370960 - MER5B DNA MER1_type -7 171 77 261 0 0 0 chr5 83259190 83259219 -116370931 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5631 48 32 15 chr5 83259219 83259961 -116370189 - SVA Other Other -19 1367 613 545 251 11 102 chr5 83259961 83260058 -116370092 - MER5B DNA MER1_type -99 79 2 323 331 59 24 chr5 83260225 83260394 -116369756 - L1MC4 LINE L1 -1871 5937 5763 245 289 143 12 chr5 83260826 83261202 -116368948 - L1ME3A LINE L1 -223 5947 5522 322 330 104 17 chr5 83261579 83261752 -116368398 + MER5A DNA MER1_type 2 189 0 267 220 0 0 chr5 83261954 83262004 -116368146 - L2 LINE L2 -8 3305 3256 2405 100 0 0 chr5 83262053 83262353 -116367797 - AluSq SINE Alu -13 300 1 1173 130 28 28 chr5 83263393 83263608 -116366542 - L1MC1 LINE L1 0 6333 6119 1619 167 78 46 chr5 83263608 83263979 -116366171 - MSTC LTR MaLR -45 383 1 1803 245 71 34 chr5 83263979 83264574 -116365576 - MSTC-int LTR MaLR 0 1651 1035 925 136 7 0 chr5 83264574 83264721 -116365429 - MSTC LTR MaLR -280 148 1 4180 231 13 4 chr5 83264724 83265805 -116364345 - L1M4 LINE L1 -1980 4166 3076 234 220 80 0 chr5 83265821 83265871 -116364279 + MER5A DNA MER1_type 136 189 0 417 233 0 0 chr5 83266513 83266603 -116363547 - Tigger5 DNA MER2_type 0 2323 2234 22 0 0 0 chr5 83266613 83266635 -116363515 + AT_rich Low_complexity Low_complexity 1 22 0 2564 51 0 6 chr5 83267331 83267644 -116362506 + AluY SINE Alu 1 311 0 947 158 37 98 chr5 83267667 83267843 -116362307 + L1MB4 LINE L1 5896 6048 -132 1932 143 14 0 chr5 83267843 83268136 -116362014 + AluSx SINE Alu 1 297 -15 947 158 37 98 chr5 83268136 83268256 -116361894 + L1MB4 LINE L1 6048 6174 -6 2450 78 0 0 chr5 83268938 83269245 -116360905 - AluSc SINE Alu -2 307 1 46 0 0 0 chr5 83269832 83269878 -116360272 + AT_rich Low_complexity Low_complexity 1 46 0 580 180 33 0 chr5 83269878 83270000 -116360150 + L1MB4 LINE L1 6049 6174 -6 32 75 0 0 chr5 83270068 83270135 -116360015 + AT_rich Low_complexity Low_complexity 1 67 0 227 129 43 43 chr5 83270138 83270208 -116359942 + A-rich Low_complexity Low_complexity 5 74 0 340 336 60 27 chr5 83270385 83270534 -116359616 + MIR3 SINE MIR 29 182 -26 2106 131 14 0 chr5 83271137 83271434 -116358716 + AluSx SINE Alu 1 301 -11 219 241 63 51 chr5 83271797 83271876 -116358274 - L2 LINE L2 -4 3268 3189 377 139 0 25 chr5 83272066 83272081 -116358069 + L1MB7 LINE L1 6103 6117 -67 1194 203 139 0 chr5 83272081 83272382 -116357768 + MER2 DNA MER2_type 2 344 0 377 139 0 25 chr5 83272382 83272445 -116357705 + L1MB7 LINE L1 6117 6179 -5 300 340 33 33 chr5 83272523 83272673 -116357477 - L2 LINE L2 -467 2847 2698 2039 148 3 0 chr5 83272801 83273099 -116357051 + AluJb SINE Alu 1 299 -13 2169 225 82 25 chr5 83273189 83273750 -116356400 - MLT1E LTR MaLR 0 593 1 475 292 144 15 chr5 83273793 83274010 -116356140 + MIR SINE MIR 12 252 -10 414 315 21 21 chr5 83274193 83274336 -116355814 - MIR3 SINE MIR -49 159 17 2017 154 0 3 chr5 83274589 83274888 -116355262 + AluSx SINE Alu 1 298 -14 198 245 49 88 chr5 83275082 83275184 -116354966 - L2 LINE L2 -5 3267 3170 273 278 83 26 chr5 83275388 83275636 -116354514 - HAL1b LINE L1 -86 2421 769 244 27 27 0 chr5 83275777 83275814 -116354336 + L1P LINE L1 4858 4895 -1251 1112 121 78 0 chr5 83275932 83276098 -116354052 - AluSg/x SINE Alu -13 299 121 1976 59 4 0 chr5 83276108 83276395 -116353755 - L1PA6 LINE L1 -8 6146 5769 35035 94 8 8 chr5 83276414 83282552 -116347598 - L1PA5 LINE L1 -4 6150 11 1915 147 21 0 chr5 83282573 83282858 -116347292 - AluSx SINE Alu -21 291 1 878 293 85 102 chr5 83282861 83283454 -116346696 - HAL1 LINE L1 -778 1729 1128 1655 148 36 30 chr5 83283454 83283757 -116346393 + AluJb SINE Alu 1 305 -7 878 293 85 102 chr5 83283757 83283955 -116346195 - HAL1 LINE L1 -1379 1128 928 2180 142 22 17 chr5 83283955 83284315 -116345835 - THE1B LTR MaLR -2 362 1 11531 93 8 4 chr5 83284315 83285890 -116344260 - THE1B-int LTR MaLR 0 1580 1 2273 126 19 25 chr5 83285890 83286256 -116343894 - THE1B LTR MaLR 0 364 1 878 293 85 102 chr5 83286256 83286351 -116343799 - HAL1 LINE L1 -1576 931 855 389 291 156 0 chr5 83286554 83286798 -116343352 - L1ME4a LINE L1 -289 6112 5831 300 283 131 35 chr5 83286942 83287140 -116343010 - L1ME4a LINE L1 -771 5655 5439 1897 167 3 3 chr5 83287548 83287854 -116342296 + AluJb SINE Alu 1 306 -6 285 274 9 53 chr5 83288635 83288694 -116341456 - MER103 DNA DNA -4 162 109 1990 145 3 10 chr5 83288694 83288991 -116341159 + AluSq SINE Alu 1 295 -18 285 274 9 53 chr5 83288991 83289044 -116341106 - MER103 DNA DNA -57 109 55 846 154 56 19 chr5 83289869 83290083 -116340067 - L1MA7 LINE L1 -2 6289 6068 258 105 0 0 chr5 83291340 83291378 -116338772 + (TCC)n Simple_repeat Simple_repeat 2 39 0 1921 164 10 6 chr5 83291378 83291689 -116338461 - AluJb SINE Alu 0 312 1 2831 50 19 0 chr5 83291860 83292219 -116337931 + L1PA4 LINE L1 5790 6155 0 10639 189 55 42 chr5 83292225 83293536 -116336614 - L1MCa LINE L1 -1807 4619 3326 2055 133 0 22 chr5 83293536 83293853 -116336297 - AluJo SINE Alu -2 310 1 10639 189 55 42 chr5 83293853 83294640 -116335510 - L1MCa LINE L1 -3100 3326 2551 2068 128 0 17 chr5 83294640 83294930 -116335220 - AluSx SINE Alu -27 285 1 10639 189 55 42 chr5 83294930 83295260 -116334890 - L1MCa LINE L1 -3875 2551 2227 670 215 0 0 chr5 83295260 83295381 -116334769 - FLAM_A SINE Alu -12 121 1 10639 189 55 42 chr5 83295381 83297492 -116332658 - L1MCa LINE L1 -4199 2227 23 843 217 167 84 chr5 83297968 83297980 -116332170 + L1MC4 LINE L1 7044 7054 -988 1944 152 10 17 chr5 83297980 83298277 -116331873 + AluJo SINE Alu 1 295 -17 843 217 167 84 chr5 83298277 83298694 -116331456 + L1MC4 LINE L1 7054 7435 -607 5521 57 25 25 chr5 83298694 83298893 -116331257 - MER4E LTR ERV1 0 766 568 2247 78 41 3 chr5 83298893 83299186 -116330964 + AluY SINE Alu 1 304 -7 5521 57 25 25 chr5 83299186 83299752 -116330398 - MER4E LTR ERV1 -197 569 1 843 217 167 84 chr5 83299752 83300247 -116329903 + L1MC4 LINE L1 7435 8040 -2 21 71 0 0 chr5 83300258 83300300 -116329850 + AT_rich Low_complexity Low_complexity 1 42 0 371 282 73 0 chr5 83300899 83301023 -116329127 - MIR3 SINE MIR -75 133 1 1795 176 7 0 chr5 83301648 83301943 -116328207 - AluJb SINE Alu -15 297 1 1081 278 111 37 chr5 83301946 83302625 -116327525 - HAL1 LINE L1 0 2507 1779 529 269 90 55 chr5 83302804 83303116 -116327034 - MLT1L LTR MaLR -239 376 54 1679 186 28 1 chr5 83303178 83303522 -116326628 - L1M LINE L1 -712 5409 5058 * 5516 102 12 0 chr5 83303521 83304287 -116325863 + L1PA13 LINE L1 5389 6163 0 456 216 21 0 chr5 83304315 83304412 -116325738 - HAL1 LINE L1 -896 1611 1513 253 273 143 0 chr5 83304568 83304645 -116325505 + MIR SINE MIR 28 115 -93 24 32 0 0 chr5 83305215 83305246 -116324904 + AT_rich Low_complexity Low_complexity 1 31 0 465 103 0 0 chr5 83305279 83305347 -116324803 + (TA)n Simple_repeat Simple_repeat 1 68 0 189 0 0 0 chr5 83305347 83305368 -116324782 + (CA)n Simple_repeat Simple_repeat 1 21 0 2498 89 0 0 chr5 83305396 83305699 -116324451 + AluSp SINE Alu 1 303 -10 201 213 0 0 chr5 83305761 83305808 -116324342 + (TGGA)n Simple_repeat Simple_repeat 3 49 0 495 267 62 4 chr5 83306591 83306791 -116323359 - LTR16A LTR ERVL -5 445 174 1356 188 49 136 chr5 83306806 83307392 -116322758 - MLT1F1 LTR MaLR -19 548 1 551 313 12 6 chr5 83307392 83307558 -116322592 - LTR16A LTR ERVL -259 191 25 1762 173 13 10 chr5 83307692 83307993 -116322157 + AluJb SINE Alu 1 302 -10 1958 158 3 7 chr5 83308030 83308333 -116321817 + AluJo SINE Alu 3 304 -8 605 273 119 0 chr5 83310608 83310784 -116319366 - MIR SINE MIR -32 230 34 2251 89 0 77 chr5 83311825 83312162 -116317988 + AluSx SINE Alu 1 311 -1 21 71 0 0 chr5 83314063 83314105 -116316045 + AT_rich Low_complexity Low_complexity 1 42 0 2171 118 3 13 chr5 83314105 83314420 -116315730 + AluSx SINE Alu 1 312 0 2340 173 56 19 chr5 83314534 83315019 -116315131 - L1MB8 LINE L1 -2 6176 5674 325 169 15 31 chr5 83315022 83315087 -116315063 + MER5B DNA MER1_type 114 177 -1 273 274 42 21 chr5 83315126 83315221 -116314929 + L2 LINE L2 3208 3304 -9 518 225 50 0 chr5 83315723 83315843 -116314307 - MER94 DNA DNA -8 126 1 339 274 20 29 chr5 83316415 83316517 -116313633 + MER5A DNA MER1_type 37 137 -52 6075 167 61 2 chr5 83316689 83317976 -116312174 - L1MC1 LINE L1 0 6333 4964 418 132 15 0 chr5 83317989 83318057 -116312093 - L1MC1 LINE L1 0 6333 6265 527 208 69 10 chr5 83318550 83318651 -116311499 + FLAM_C SINE Alu 2 108 -35 2800 96 28 19 chr5 83318953 83319379 -116310771 - L1PA13 LINE L1 0 6163 5734 306 0 0 0 chr5 83320482 83320516 -116309634 + (TG)n Simple_repeat Simple_repeat 2 35 0 375 253 89 79 chr5 83320905 83321095 -116309055 - LTR67 LTR ERVL -13 544 353 929 228 49 0 chr5 83321599 83321783 -116308367 + MER58A DNA MER1_type 1 193 -31 1479 171 21 25 chr5 83321842 83322154 -116307996 - AluJb SINE Alu 0 313 3 356 285 49 26 chr5 83322267 83322503 -116307647 - L1 LINE L1 -3634 2512 2261 216 86 0 0 chr5 83322503 83322538 -116307612 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 356 285 49 26 chr5 83322538 83322587 -116307563 - L1 LINE L1 -3885 2261 2215 198 0 0 0 chr5 83322599 83322621 -116307529 + (T)n Simple_repeat Simple_repeat 1 22 0 2155 138 3 3 chr5 83322691 83323003 -116307147 - AluSx SINE Alu 0 312 1 1498 136 3 117 chr5 83323164 83323207 -116306943 + AluJb SINE Alu 3 49 -263 315 0 0 0 chr5 83323207 83323242 -116306908 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2052 133 4 0 chr5 83323245 83323524 -116306626 - AluSx SINE Alu -32 280 1 1498 136 3 117 chr5 83323524 83323785 -116306365 + AluJb SINE Alu 51 276 -36 249 83 0 0 chr5 83323788 83323824 -116306326 + (TG)n Simple_repeat Simple_repeat 2 37 0 900 309 89 16 chr5 83323980 83324539 -116305611 - HAL1b LINE L1 -567 781 182 1698 173 35 0 chr5 83324559 83324848 -116305302 + AluJb SINE Alu 1 299 -13 1648 195 38 0 chr5 83325046 83325338 -116304812 - AluJb SINE Alu -9 303 1 21 0 0 0 chr5 83325380 83325401 -116304749 + AT_rich Low_complexity Low_complexity 1 21 0 2626 55 0 3 chr5 83325661 83325972 -116304178 - AluY SINE Alu -1 310 1 1205 235 140 55 chr5 83326391 83326878 -116303272 - MER51C LTR ERV1 0 640 1 1535 299 24 32 chr5 83326878 83327908 -116302242 - HUERS-P3 LTR ERV1 0 8186 7382 311 196 56 47 chr5 83328563 83328670 -116301480 - HUERS-P3 LTR ERV1 -1623 6776 6669 1366 306 63 28 chr5 83328873 83329588 -116300562 - HUERS-P3 LTR ERV1 -1570 6186 5447 2160 146 42 16 chr5 83329629 83330007 -116300143 + MER61D LTR ERV1 114 501 0 2057 124 10 13 chr5 83330255 83330561 -116299589 + AluSx SINE Alu 1 305 -7 806 315 46 53 chr5 83330760 83331618 -116298532 - HUERS-P3 LTR ERV1 -2807 4949 3532 678 300 38 84 chr5 83331735 83331840 -116298310 - HUERS-P3 LTR ERV1 -1589 3897 3789 2321 112 0 3 chr5 83331840 83332154 -116297996 - AluSp SINE Alu 0 313 1 678 300 38 84 chr5 83332154 83332391 -116297759 - HUERS-P3 LTR ERV1 -1697 3789 3543 2196 94 0 17 chr5 83332391 83332719 -116297431 + AluY SINE Alu 1 323 0 678 300 38 84 chr5 83332719 83332976 -116297174 - HUERS-P3 LTR ERV1 -1943 3543 2796 2347 116 0 0 chr5 83333349 83333659 -116296491 + AluSg SINE Alu 1 310 0 540 322 37 19 chr5 83334038 83334361 -116295789 - HUERS-P3 LTR ERV1 -4006 2670 2342 301 300 38 25 chr5 83334584 83334744 -116295406 - HUERS-P3 LTR ERV1 -5900 1856 1695 621 279 33 43 chr5 83335010 83335596 -116294554 - HUERS-P3 LTR ERV1 -3873 1007 587 1277 218 58 101 chr5 83336147 83336265 -116293885 - MER51C LTR ERV1 0 640 519 2258 87 4 0 chr5 83336265 83336579 -116293571 - AluSc SINE Alu 0 315 1 1277 218 58 101 chr5 83336579 83337015 -116293135 - MER51C LTR ERV1 -121 519 1 6175 131 47 33 chr5 83337864 83338920 -116291230 - MER11C LTR ERVK 0 1071 1 1628 157 39 18 chr5 83339184 83339470 -116290680 + AluJb SINE Alu 1 292 -20 396 274 97 68 chr5 83339482 83339803 -116290347 + L1ME1 LINE L1 1 330 -6210 320 248 94 17 chr5 83340162 83340279 -116289871 + L1ME1 LINE L1 782 907 -5623 630 263 67 79 chr5 83340353 83340669 -116289481 + L1ME1 LINE L1 906 1217 -5326 808 168 0 8 chr5 83340685 83340805 -116289345 + AluJb SINE Alu 168 287 -21 192 77 0 0 chr5 83340805 83340831 -116289319 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1085 137 23 6 chr5 83341048 83341223 -116288927 + L1MB2 LINE L1 5990 6167 -4 2415 237 82 61 chr5 83341299 83341777 -116288373 + L1ME1 LINE L1 1276 1743 -4797 1803 149 23 36 chr5 83341777 83342085 -116288065 + AluJb SINE Alu 1 304 -8 2415 237 82 61 chr5 83342085 83342674 -116287476 + L1ME1 LINE L1 1743 2318 -4222 2211 110 10 0 chr5 83342674 83342973 -116287177 + AluSc SINE Alu 1 302 -7 2415 237 82 61 chr5 83342973 83343048 -116287102 + L1ME1 LINE L1 2318 2390 -4150 1609 184 13 17 chr5 83343048 83343347 -116286803 + AluJb SINE Alu 1 298 -14 2415 237 82 61 chr5 83343347 83343596 -116286554 + L1ME1 LINE L1 2390 2632 -3908 1691 129 77 0 chr5 83343596 83343868 -116286282 + AluSx SINE Alu 1 293 -19 2415 237 82 61 chr5 83343868 83344188 -116285962 + L1ME1 LINE L1 2632 3017 -3523 2527 219 87 36 chr5 83344214 83344553 -116285597 + L1ME1 LINE L1 3952 4272 -2268 1766 168 17 3 chr5 83344553 83344851 -116285299 - AluJb SINE Alu -10 302 1 2527 219 87 36 chr5 83344851 83344951 -116285199 + L1ME1 LINE L1 4272 4365 -2175 2385 97 3 0 chr5 83344951 83345251 -116284899 - AluSp SINE Alu -12 301 1 2527 219 87 36 chr5 83345251 83345568 -116284582 + L1ME1 LINE L1 4365 4748 -1792 419 322 17 0 chr5 83346108 83346282 -116283868 - L1MC4 LINE L1 -157 7885 7709 2861 221 111 30 chr5 83346296 83346748 -116283402 + L1ME1 LINE L1 4767 5181 -1379 185 0 40 0 chr5 83346748 83346773 -116283377 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1664 152 3 40 chr5 83346775 83346932 -116283218 - AluJo SINE Alu -26 286 144 1939 162 0 3 chr5 83346932 83347229 -116282921 - AluSx SINE Alu -16 296 1 1664 152 3 40 chr5 83347229 83347368 -116282782 - AluJo SINE Alu -168 144 1 2861 221 111 30 chr5 83347368 83348293 -116281857 + L1ME1 LINE L1 5181 6305 -255 2085 119 3 32 chr5 83348293 83348605 -116281545 - AluSx SINE Alu -9 303 1 2861 221 111 30 chr5 83348605 83348864 -116281286 + L1ME1 LINE L1 6305 6542 -18 21 0 0 0 chr5 83348870 83348891 -116281259 + AT_rich Low_complexity Low_complexity 1 21 0 1624 189 0 14 chr5 83348945 83349256 -116280894 + AluJo SINE Alu 1 307 0 2237 129 43 0 chr5 83349275 83349625 -116280525 + L1MB3 LINE L1 5812 6176 -7 268 29 0 0 chr5 83350508 83350542 -116279608 - AluSc SINE Alu -163 136 103 1180 93 0 0 chr5 83350543 83350693 -116279457 + AluSg/x SINE Alu 154 303 -7 765 310 110 4 chr5 83350894 83351149 -116279001 + MLT1I LTR MaLR 128 409 0 735 278 127 39 chr5 83351341 83351773 -116278377 + MLT1L LTR MaLR 144 613 -2 183 42 0 0 chr5 83353867 83353891 -116276259 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1693 156 0 31 chr5 83353894 83354183 -116275967 - AluJo SINE Alu -32 280 1 855 197 26 61 chr5 83355270 83355498 -116274652 + MIR SINE MIR 8 227 -35 189 250 19 0 chr5 83356523 83356575 -116273575 - L3 LINE CR1 -918 659 607 319 243 47 37 chr5 83356877 83356984 -116273166 - L2 LINE L2 -8 3305 3198 1007 169 6 22 chr5 83357031 83357209 -116272941 + L1PA15 LINE L1 5983 6157 -8 871 269 43 8 chr5 83357225 83357478 -116272672 - MIR SINE MIR 0 262 1 5378 215 31 32 chr5 83357991 83358305 -116271845 + L1M4 LINE L1 3722 4035 -2111 1807 156 30 7 chr5 83358305 83358600 -116271550 - AluJo SINE Alu -10 302 1 5378 215 31 32 chr5 83358600 83358924 -116271226 + L1M4 LINE L1 4035 4358 -1788 1620 169 52 0 chr5 83358924 83359191 -116270959 - AluJo SINE Alu -20 292 12 5378 215 31 32 chr5 83359191 83359960 -116270190 + L1M4 LINE L1 4358 5129 -1017 1519 154 48 24 chr5 83359996 83360325 -116269825 - L1M3 LINE L1 -613 5567 5232 451 285 7 53 chr5 83360344 83360495 -116269655 + MER77 LTR ERV1 66 209 -396 262 222 71 61 chr5 83360635 83360734 -116269416 - L3b LINE CR1 -281 1302 1203 1543 134 156 0 chr5 83360966 83361041 -116269109 + MER44D DNA MER2_type 1 63 -2428 342 0 0 0 chr5 83361041 83361079 -116269071 + (GA)n Simple_repeat Simple_repeat 1 38 0 1543 134 156 0 chr5 83361079 83361278 -116268872 + MER44D DNA MER2_type 63 588 -21 186 322 0 0 chr5 83362190 83362249 -116267901 + MIR SINE MIR 83 141 -67 375 236 181 16 chr5 83363614 83363741 -116266409 + MIR SINE MIR 113 260 -2 198 316 135 23 chr5 83363953 83364086 -116266064 - MIR SINE MIR -69 193 46 233 363 15 59 chr5 83364203 83364338 -116265812 - L2 LINE L2 -6 3266 3138 2220 99 3 3 chr5 83364969 83365261 -116264889 - AluSx SINE Alu -17 295 4 1481 154 109 0 chr5 83365305 83365571 -116264579 + AluJb SINE Alu 1 295 -17 27 0 0 0 chr5 83365822 83365849 -116264301 + AT_rich Low_complexity Low_complexity 1 27 0 1520 197 38 67 chr5 83366064 83366435 -116263715 - MLT1A1 LTR MaLR 0 365 6 2435 88 0 3 chr5 83367311 83367618 -116262532 + AluSg SINE Alu 1 306 -4 188 292 112 34 chr5 83367722 83367811 -116262339 - MIR SINE MIR -27 235 140 209 338 59 0 chr5 83367906 83367974 -116262176 - MIR SINE MIR -164 98 27 865 250 12 0 chr5 83368399 83368571 -116261579 - FAM SINE Alu -1 174 1 21 0 0 0 chr5 83369250 83369271 -116260879 + AT_rich Low_complexity Low_complexity 1 21 0 2121 112 0 3 chr5 83369340 83369643 -116260507 + AluSq SINE Alu 1 302 -11 250 277 77 0 chr5 83370040 83370105 -116260045 - MIR SINE MIR -154 108 39 2152 107 21 0 chr5 83370534 83370824 -116259326 + AluSq SINE Alu 1 296 -17 1725 251 22 51 chr5 83370977 83371480 -116258670 - L1ME3A LINE L1 -5 6165 5668 263 364 76 0 chr5 83371484 83371602 -116258548 + LTR67 LTR ERVL 67 193 -364 286 349 9 0 chr5 83371837 83371946 -116258204 - L2 LINE L2 -185 3087 2978 2223 102 3 0 chr5 83371969 83372287 -116257863 + AluSx SINE Alu 1 319 0 702 251 251 16 chr5 83372567 83372990 -116257160 + LTR33A LTR ERVL 2 523 0 2020 137 60 35 chr5 83373906 83374272 -116255878 + THE1C LTR MaLR 1 375 0 341 291 13 0 chr5 83374332 83374411 -116255739 + MER81 DNA DNA 34 113 -1 427 318 16 8 chr5 83374776 83374902 -116255248 + MER5B DNA MER1_type 1 127 -51 1990 92 18 28 chr5 83374935 83375218 -116254932 + AluSx SINE Alu 1 280 -32 255 204 0 0 chr5 83375241 83375285 -116254865 - MER5B DNA MER1_type -134 44 1 845 156 0 30 chr5 83375348 83375483 -116254667 - FLAM_C SINE Alu -2 131 1 2271 114 0 0 chr5 83376077 83376383 -116253767 - AluSx SINE Alu -1 311 6 1365 77 6 0 chr5 83376396 83376565 -116253585 - AluSg/x SINE Alu -9 301 132 2112 109 10 10 chr5 83376565 83376868 -116253282 - AluSg SINE Alu -7 303 1 1562 186 9 46 chr5 83377228 83377551 -116252599 + AluJo SINE Alu 1 311 -1 2503 261 73 33 chr5 83377551 83378545 -116251605 + L1ME1 LINE L1 65 1098 -5298 416 240 105 50 chr5 83378536 83378736 -116251414 + L1ME1 LINE L1 3849 4059 -2156 * 189 196 0 0 chr5 83378736 83378782 -116251368 + T-rich Low_complexity Low_complexity 1 46 0 5402 25 0 8 chr5 83378834 83379430 -116250720 - SVA Other Other 0 1386 796 2785 208 47 138 chr5 83379435 83380053 -116250097 + L1ME1 LINE L1 4049 4722 -1493 611 206 32 32 chr5 83380053 83380213 -116249937 - FLAM_A SINE Alu 0 133 1 2785 208 47 138 chr5 83380213 83380453 -116249697 + L1ME1 LINE L1 4722 4768 -1447 1912 120 4 11 chr5 83380453 83380727 -116249423 + AluSx SINE Alu 40 311 -1 2785 208 47 138 chr5 83380727 83381077 -116249073 + L1ME1 LINE L1 4768 5148 -1067 1125 177 31 65 chr5 83381074 83381368 -116248782 + L1ME1 LINE L1 5785 6068 -167 * 7144 74 20 19 chr5 83381381 83383078 -116247072 - L1PA10 LINE L1 -1 6167 4459 610 223 7 0 chr5 83383095 83383243 -116246907 + L1MA10 LINE L1 6169 6317 -17 422 300 26 37 chr5 83383292 83383482 -116246668 - MLT1J2 LTR MaLR 0 450 263 350 242 40 51 chr5 83384177 83384299 -116245851 + MIR SINE MIR 34 158 -59 263 211 13 66 chr5 83384446 83384522 -116245628 + MIR SINE MIR 140 211 -51 1998 144 0 13 chr5 83385827 83386133 -116244017 + AluJb SINE Alu 1 302 -10 460 288 94 16 chr5 83386151 83386342 -116243808 - MIR SINE MIR -12 250 45 593 251 36 12 chr5 83386399 83386566 -116243584 + MIR SINE MIR 20 190 -72 475 323 6 37 chr5 83386921 83387082 -116243068 - MIR SINE MIR -86 176 21 227 261 102 57 chr5 83387163 83387251 -116242899 - MLT1K LTR MaLR -314 274 183 5498 55 3 0 chr5 83387587 83388222 -116241928 + L1PA6 LINE L1 5516 6152 -2 475 222 31 62 chr5 83388356 83388518 -116241632 - LTR16A LTR ERVL -197 253 97 2061 112 45 0 chr5 83388820 83389107 -116241043 + AluSg SINE Alu 1 300 -10 297 204 21 97 chr5 83389146 83389239 -116240911 - L2 LINE L2 -3 3310 3225 2550 262 118 20 chr5 83389333 83390277 -116239873 - L2 LINE L2 -537 2777 1742 238 213 48 213 chr5 83390764 83390994 -116239156 + MER91 DNA MER1_type 5 190 0 4364 82 28 0 chr5 83391506 83392045 -116238105 - MER41A LTR ERV1 0 554 1 309 208 0 0 chr5 83392317 83392389 -116237761 + CT-rich Low_complexity Low_complexity 4 75 0 1568 169 59 10 chr5 83393063 83393353 -116236797 + AluJo SINE Alu 1 304 -8 507 148 0 0 chr5 83393353 83393441 -116236709 + (GA)n Simple_repeat Simple_repeat 1 88 0 417 266 4 11 chr5 83394997 83395274 -116234876 + (TG)n Simple_repeat Simple_repeat 1 274 0 246 254 12 6 chr5 83395428 83395593 -116234557 + (TG)n Simple_repeat Simple_repeat 1 166 0 22 0 0 0 chr5 83395701 83395723 -116234427 + GC_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr5 83395933 83395969 -116234181 + GC_rich Low_complexity Low_complexity 1 36 0 324 48 0 0 chr5 83401587 83401629 -116228521 + (TG)n Simple_repeat Simple_repeat 1 42 0 189 0 0 0 chr5 83402172 83402193 -116227957 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2056 95 4 0 chr5 83402614 83402876 -116227274 + AluSp SINE Alu 1 263 -50 29 0 0 0 chr5 83402912 83402941 -116227209 + AT_rich Low_complexity Low_complexity 1 29 0 549 302 104 0 chr5 83403453 83403645 -116226505 + MIR SINE MIR 32 243 -19 335 287 44 44 chr5 83403747 83403928 -116226222 - L1MC5 LINE L1 -49 7912 7732 1770 166 3 3 chr5 83404207 83404491 -116225659 - AluJo SINE Alu -28 284 1 2233 107 0 16 chr5 83404631 83404941 -116225209 - AluSg SINE Alu -5 305 1 2622 48 0 10 chr5 83404948 83405258 -116224892 - AluY SINE Alu -4 307 1 2543 66 7 0 chr5 83405324 83405629 -116224521 - AluSp SINE Alu -2 311 5 26 50 0 0 chr5 83406513 83406553 -116223597 + AT_rich Low_complexity Low_complexity 1 40 0 2933 221 76 46 chr5 83406587 83406913 -116223237 - L1ME3A LINE L1 -7 6163 5848 1456 156 98 48 chr5 83406913 83407077 -116223073 - AluJb SINE Alu -2 310 156 1952 133 7 23 chr5 83407077 83407378 -116222772 - AluJb SINE Alu -12 300 5 1456 156 98 48 chr5 83407378 83407391 -116222759 - AluJb SINE Alu -156 156 145 252 77 0 0 chr5 83407391 83407430 -116222720 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1456 156 98 48 chr5 83407430 83407546 -116222604 - AluJb SINE Alu -167 145 1 2933 221 76 46 chr5 83407546 83407997 -116222153 - L1ME3A LINE L1 -322 5848 5412 2192 124 0 0 chr5 83407997 83408287 -116221863 - AluSx SINE Alu -17 295 6 2933 221 76 46 chr5 83408287 83408372 -116221778 - L1ME3A LINE L1 -758 5412 5331 333 205 26 0 chr5 83408372 83408450 -116221700 - MER116 DNA Mariner 0 80 1 2933 221 76 46 chr5 83408450 83408593 -116221557 - L1ME3A LINE L1 -839 5331 5120 1387 242 27 64 chr5 83408623 83409371 -116220779 - HERVL40 LTR ERVL -595 4660 1769 1309 216 67 0 chr5 83409374 83409629 -116220521 - HERVL40 LTR ERVL -1731 3799 3528 894 231 5 16 chr5 83409649 83409835 -116220315 - HERVL40 LTR ERVL -2131 3399 3216 1704 225 54 29 chr5 83409896 83410305 -116219845 - HERVL40 LTR ERVL -2417 3113 2695 2300 76 38 0 chr5 83411365 83411654 -116218496 - AluSp SINE Alu -13 300 1 349 328 130 0 chr5 83411732 83411909 -116218241 - MIR SINE MIR -2 260 61 206 305 191 0 chr5 83412774 83412905 -116217245 + MIR SINE MIR 34 189 -73 2024 119 22 0 chr5 83412961 83413268 -116216882 - AluSq SINE Alu 0 313 1 28 29 0 0 chr5 83413611 83413646 -116216504 + AT_rich Low_complexity Low_complexity 1 35 0 808 218 87 94 chr5 83413825 83414012 -116216138 - L1ME4a LINE L1 -4 6117 5930 2225 115 0 13 chr5 83414012 83414317 -116215833 + AluSq SINE Alu 1 301 -12 808 218 87 94 chr5 83414317 83414556 -116215594 - L1ME4a LINE L1 -191 5930 5694 2206 134 0 6 chr5 83415870 83416183 -116213967 + AluSx SINE Alu 1 311 -1 273 151 0 0 chr5 83417016 83417069 -116213081 + (TG)n Simple_repeat Simple_repeat 2 54 0 1744 142 4 0 chr5 83417089 83417342 -116212808 - AluSx SINE Alu -23 289 36 2406 57 0 0 chr5 83418092 83418423 -116211727 - AluY SINE Alu 0 331 1 704 144 0 0 chr5 83419054 83419158 -116210992 + MER58 DNA MER1_type 2317 2420 0 1597 139 30 51 chr5 83419166 83419497 -116210653 + MER33 DNA MER1_type 1 324 0 1940 148 26 0 chr5 83419572 83419876 -116210274 - AluSx SINE Alu 0 312 1 467 291 16 28 chr5 83420163 83420345 -116209805 + L1ME LINE L1 5616 5795 -326 1807 159 0 7 chr5 83420457 83420769 -116209381 + AluJb SINE Alu 7 316 0 249 33 0 0 chr5 83421448 83421478 -116208672 + (TG)n Simple_repeat Simple_repeat 2 31 0 228 363 141 22 chr5 83421909 83422044 -116208106 + L2 LINE L2 3121 3271 -1 205 330 86 30 chr5 83422461 83422658 -116207492 + L2 LINE L2 2854 3061 -211 226 143 0 0 chr5 83422782 83422817 -116207333 - MIR SINE MIR -12 250 216 366 23 0 0 chr5 83423524 83423567 -116206583 + (TG)n Simple_repeat Simple_repeat 2 44 0 1902 160 0 0 chr5 83423571 83423865 -116206285 - AluJb SINE Alu -18 294 1 266 248 230 0 chr5 83424099 83424212 -116205938 + MIR SINE MIR 36 174 -88 201 300 33 17 chr5 83424274 83424334 -116205816 + MIR SINE MIR 201 261 -1 2147 104 24 0 chr5 83424497 83424785 -116205365 - AluSx SINE Alu -17 295 1 230 216 261 36 chr5 83426617 83426675 -116203475 - MER5A DNA MER1_type -7 182 138 1220 172 125 65 chr5 83426675 83426954 -116203196 + AluJb SINE Alu 1 296 -6 230 216 261 36 chr5 83426954 83427006 -116203144 - MER5A DNA MER1_type -51 138 47 183 129 0 0 chr5 83427682 83427713 -116202437 + (CA)n Simple_repeat Simple_repeat 2 32 0 1070 298 150 2 chr5 83429029 83429482 -116200668 - LTR33 LTR ERVL 0 521 2 2186 53 0 4 chr5 83429637 83429899 -116200251 + AluY SINE Alu 40 300 -11 826 249 56 44 chr5 83430345 83430490 -116199660 - L1ME1 LINE L1 -4 6162 6011 2446 77 0 0 chr5 83430490 83430789 -116199361 + AluY SINE Alu 1 299 -12 826 249 56 44 chr5 83430789 83430892 -116199258 - L1ME1 LINE L1 -155 6011 5911 207 0 0 0 chr5 83430895 83430918 -116199232 + (TA)n Simple_repeat Simple_repeat 1 23 0 311 282 126 75 chr5 83431000 83431209 -116198941 - HAL1 LINE L1 -4 2503 2269 2142 123 0 0 chr5 83431209 83431509 -116198641 - AluSx SINE Alu -12 300 1 311 282 126 75 chr5 83431509 83431632 -116198518 - HAL1 LINE L1 -238 2269 2154 729 129 0 0 chr5 83431989 83432105 -116198045 + (TCC)n Simple_repeat Simple_repeat 2 117 0 1860 109 0 43 chr5 83432105 83432381 -116197769 - AluSx SINE Alu -13 299 36 2571 50 0 0 chr5 83433205 83433504 -116196646 + AluY SINE Alu 2 300 -11 512 315 169 25 chr5 83434199 83434644 -116195506 + LTR33 LTR ERVL 13 521 0 1746 154 39 16 chr5 83434843 83435024 -116195126 - AluJo SINE Alu 0 312 120 206 0 69 0 chr5 83435024 83435053 -116195097 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1746 154 39 16 chr5 83435053 83435176 -116194974 - AluJo SINE Alu -192 120 1 750 180 17 159 chr5 83435382 83435671 -116194479 - MLT1G LTR MaLR -21 569 322 258 246 31 0 chr5 83435678 83435743 -116194407 + MLT1H1 LTR MaLR 206 272 -283 2059 111 0 4 chr5 83435778 83436048 -116194102 - AluSq SINE Alu -33 280 12 193 284 61 81 chr5 83437240 83437388 -116192762 + L2 LINE L2 3161 3305 -8 1877 137 7 37 chr5 83438577 83438735 -116191415 - AluSx SINE Alu -22 290 144 2583 50 0 3 chr5 83438735 83439038 -116191112 - AluY SINE Alu -8 303 2 1877 137 7 37 chr5 83439038 83439178 -116190972 - AluSx SINE Alu -168 144 1 2196 184 22 26 chr5 83440451 83440668 -116189482 - L1MB7 LINE L1 -100 6084 5868 2753 104 8 8 chr5 83440668 83441043 -116189107 - THE1C LTR MaLR 0 375 1 2196 184 22 26 chr5 83441043 83441281 -116188869 - L1MB7 LINE L1 -316 5868 5631 364 279 133 19 chr5 83441367 83441525 -116188625 + MIR3 SINE MIR 19 194 -14 33 66 0 0 chr5 83441598 83441659 -116188491 + AT_rich Low_complexity Low_complexity 1 61 0 1959 214 89 70 chr5 83442125 83442757 -116187393 + LTR48B LTR ERV1 1 644 0 2469 90 0 0 chr5 83443656 83443967 -116186183 - AluSx SINE Alu -1 311 1 242 196 0 22 chr5 83444181 83444227 -116185923 + polypyrimidine Low_complexity Low_complexity 4 48 0 347 289 125 0 chr5 83444639 83444767 -116185383 + MIR SINE MIR 108 251 -11 435 263 71 54 chr5 83445149 83445393 -116184757 + L1ME4a LINE L1 5712 5965 -156 2201 113 10 0 chr5 83445393 83445694 -116184456 + AluSg SINE Alu 1 304 -6 435 263 71 54 chr5 83445694 83445803 -116184347 + L1ME4a LINE L1 5965 6071 -50 249 94 38 75 chr5 83446639 83446692 -116183458 - L1ME4a LINE L1 -103 6018 5968 339 281 78 24 chr5 83446768 83446935 -116183215 - L1MC4a LINE L1 -1959 5849 5674 2433 93 3 0 chr5 83446976 83447288 -116182862 + AluSp SINE Alu 1 313 0 504 209 33 33 chr5 83447594 83447747 -116182403 - L1MC4 LINE L1 0 8042 7890 349 258 21 0 chr5 83447743 83447840 -116182310 - L1MC4a LINE L1 -509 7299 7201 * 491 223 74 0 chr5 83447835 83447956 -116182194 - L1ME1 LINE L1 -310 5856 5727 485 292 28 0 chr5 83448051 83448195 -116181955 + LTR16A LTR ERVL 98 245 -205 444 288 31 0 chr5 83448379 83448542 -116181608 + HERVL LTR ERVL 3777 3944 -1710 968 269 43 69 chr5 83448598 83449063 -116181087 - L1ME LINE L1 -5477 593 141 248 125 68 11 chr5 83449112 83449200 -116180950 + (TATATG)n Simple_repeat Simple_repeat 4 96 0 312 289 97 26 chr5 83449269 83449561 -116180589 - L1ME1 LINE L1 -719 5432 5286 2446 115 48 25 chr5 83449755 83450111 -116180039 - THE1B LTR MaLR 0 364 1 490 236 116 45 chr5 83450233 83450432 -116179718 - L1ME4a LINE L1 -281 5840 5628 867 218 6 0 chr5 83450433 83450589 -116179561 - AluJb SINE Alu -9 303 147 1408 63 1 1 chr5 83450706 83450896 -116179254 - L1P5 LINE L1 -421 5730 5542 25 51 0 0 chr5 83450906 83450945 -116179205 + AT_rich Low_complexity Low_complexity 1 39 0 239 211 22 67 chr5 83451099 83451189 -116178961 - L1ME4a LINE L1 -813 5333 5248 300 360 27 13 chr5 83451934 83452084 -116178066 - L3 LINE CR1 -367 1210 1059 2142 114 6 35 chr5 83453337 83453653 -116176497 + AluSx SINE Alu 6 312 0 2131 111 10 3 chr5 83454319 83454616 -116175534 - AluSx SINE Alu -12 300 2 280 233 27 14 chr5 83456004 83456077 -116174073 - L2 LINE L2 -2 3311 3238 408 245 217 7 chr5 83456332 83456475 -116173675 - MIR SINE MIR -11 251 79 386 306 94 20 chr5 83456547 83456792 -116173358 - L2 LINE L2 -385 2929 2667 204 97 0 0 chr5 83457066 83457097 -116173053 + (TG)n Simple_repeat Simple_repeat 2 32 0 2063 198 33 62 chr5 83457219 83457735 -116172415 - LTR26B LTR ERV1 0 531 31 2438 97 0 0 chr5 83459765 83460076 -116170074 - AluSq SINE Alu -2 311 1 861 170 16 13 chr5 83461481 83461788 -116168362 + CT-rich Low_complexity Low_complexity 1 308 0 723 187 0 0 chr5 83462550 83462684 -116167466 - L1MB7 LINE L1 -20 6164 6031 1237 171 130 0 chr5 83462684 83462930 -116167220 + L1MC2 LINE L1 6058 6335 -9 352 226 12 0 chr5 83462943 83463027 -116167123 - L1MB7 LINE L1 -147 6037 5953 42293 64 5 2 chr5 83464227 83469697 -116160453 + L1PA5 LINE L1 3 5491 -663 7491 20 14 0 chr5 83469697 83470508 -116159642 + L1PA3 LINE L1 5313 6155 0 5687 54 18 0 chr5 83470508 83471169 -116158981 + L1PA5 LINE L1 5476 6151 -3 621 232 18 54 chr5 83471209 83471433 -116158717 + L1MEd LINE L1 978 1193 -4926 1626 248 70 100 chr5 83471683 83472438 -116157712 - HAL1 LINE L1 -115 2392 1677 2571 124 14 14 chr5 83472438 83472802 -116157348 - THE1B LTR MaLR 0 364 1 1626 248 70 100 chr5 83472802 83473109 -116157041 - HAL1 LINE L1 -830 1677 1362 959 285 82 18 chr5 83473493 83474113 -116156037 - L1ME3 LINE L1 -218 5944 5246 1842 186 0 0 chr5 83474113 83474420 -116155730 - AluJo SINE Alu -5 307 1 959 285 82 18 chr5 83474420 83474669 -116155481 - L1ME3 LINE L1 -916 5246 5014 261 304 127 25 chr5 83474823 83475106 -116155044 + L1MEd LINE L1 2213 2524 -3605 1758 163 0 39 chr5 83475538 83475845 -116154305 - AluJo SINE Alu -11 301 7 400 268 32 57 chr5 83476063 83476220 -116153930 - L1MEd LINE L1 -5725 394 242 2325 94 3 0 chr5 83476564 83476862 -116153288 + AluSg SINE Alu 1 299 -11 1530 231 67 17 chr5 83477266 83477685 -116152465 - L1ME1 LINE L1 -31 6135 5696 358 297 159 0 chr5 83477809 83477954 -116152196 + MER117 DNA MER1_type 4 171 -26 611 266 20 60 chr5 83478741 83478993 -116151157 - MIR SINE MIR 0 262 21 2117 131 0 0 chr5 83479677 83479967 -116150183 + AluSx SINE Alu 1 290 -22 483 278 67 45 chr5 83480114 83480337 -116149813 - MIR SINE MIR -34 228 1 189 0 0 0 chr5 83484702 83484723 -116145427 + (A)n Simple_repeat Simple_repeat 1 21 0 400 305 104 13 chr5 83485235 83485389 -116144761 - MIR SINE MIR -90 172 5 224 333 122 35 chr5 83485431 83485833 -116144317 + L2 LINE L2 2282 2718 -596 184 326 53 11 chr5 83485966 83486061 -116144089 - L2 LINE L2 0 3313 3215 381 303 192 30 chr5 83486420 83486691 -116143459 - L1ME1 LINE L1 -539 5582 5268 4194 150 28 8 chr5 83486844 83487549 -116142601 - L1MB7 LINE L1 0 6184 5466 27713 42 2 2 chr5 83488664 83492819 -116137331 - L1PA5 LINE L1 0 6154 2000 21 0 0 0 chr5 83493063 83493084 -116137066 + AT_rich Low_complexity Low_complexity 1 21 0 1081 157 0 65 chr5 83493085 83493250 -116136900 - L1MA6 LINE L1 -1 6299 6125 1894 146 0 3 chr5 83493250 83493538 -116136612 + AluJb SINE Alu 1 287 -25 252 0 0 0 chr5 83493538 83493566 -116136584 + (TTAA)n Simple_repeat Simple_repeat 2 29 0 1081 157 0 65 chr5 83493566 83493615 -116136535 - L1MA6 LINE L1 -173 6127 6098 966 168 157 5 chr5 83494142 83494333 -116135817 + AluJb SINE Alu 86 305 -7 212 227 15 30 chr5 83494342 83494408 -116135742 + (ATTAG)n Simple_repeat Simple_repeat 4 68 0 945 284 122 50 chr5 83494515 83494634 -116135516 + L2 LINE L2 2601 2710 -603 2443 63 0 3 chr5 83494634 83494934 -116135216 + AluY SINE Alu 1 299 -12 945 284 122 50 chr5 83494934 83495057 -116135093 + L2 LINE L2 2710 2823 -490 2418 138 67 45 chr5 83495057 83495097 -116135053 - MSTA LTR MaLR 0 428 390 2286 101 7 0 chr5 83495097 83495403 -116134747 + AluSg1 SINE Alu 1 308 -1 2418 138 67 45 chr5 83495403 83495781 -116134369 - MSTA LTR MaLR -38 390 1 945 284 122 50 chr5 83495781 83496206 -116133944 + L2 LINE L2 2823 3313 0 677 257 70 116 chr5 83496323 83497044 -116133106 - L1ME4a LINE L1 -33 6088 5402 1468 156 28 106 chr5 83497044 83497208 -116132942 - AluJo SINE Alu -16 296 168 1830 181 3 7 chr5 83497208 83497518 -116132632 - AluJb SINE Alu 0 312 4 1468 156 28 106 chr5 83497518 83497673 -116132477 - AluJo SINE Alu -144 168 2 677 257 70 116 chr5 83497673 83497709 -116132441 - L1ME4a LINE L1 -719 5402 5366 288 269 42 34 chr5 83497755 83497874 -116132276 - HAL1b LINE L1 -439 909 790 319 258 70 65 chr5 83497930 83498116 -116132034 - HAL1b LINE L1 -437 911 725 444 274 60 101 chr5 83498281 83498779 -116131371 - HAL1 LINE L1 -708 1799 1353 2020 123 31 3 chr5 83498779 83499071 -116131079 - AluSx SINE Alu -12 300 1 444 274 60 101 chr5 83499071 83499483 -116130667 - HAL1 LINE L1 -1154 1353 926 2049 234 67 47 chr5 83499496 83500077 -116130073 - MLT1E LTR MaLR 0 593 1 1109 285 53 51 chr5 83500276 83500764 -116129386 + MLT1E LTR MaLR 57 545 -48 5194 148 54 58 chr5 83501278 83502487 -116127663 + L1MC1 LINE L1 5133 6333 0 343 274 20 29 chr5 83502659 83502761 -116127389 - MER5A DNA MER1_type -52 137 37 5527 46 23 14 chr5 83503400 83504098 -116126052 + SVA Other Other 683 1386 0 222 192 0 0 chr5 83504150 83504202 -116125948 + A-rich Low_complexity Low_complexity 1 52 0 333 248 115 6 chr5 83504239 83504396 -116125754 - L1M4 LINE L1 -2193 3953 3780 * 2138 261 73 33 chr5 83504387 83505383 -116124767 - L1MEc LINE L1 -5298 1098 63 364 191 0 73 chr5 83505416 83505526 -116124624 - FRAM SINE Alu -25 141 40 1127 136 11 17 chr5 83506292 83506468 -116123682 - AluSx SINE Alu -98 214 40 2236 239 33 46 chr5 83506522 83506708 -116123442 - L1M4 LINE L1 -1358 4788 4601 560 225 36 0 chr5 83506708 83506854 -116123296 + FLAM_A SINE Alu 1 150 0 2236 239 33 46 chr5 83506854 83507486 -116122664 - L1M4 LINE L1 -1545 4601 3980 4821 38 9 26 chr5 83507491 83508102 -116122048 + SVA Other Other 796 1396 0 296 235 0 94 chr5 83508106 83508191 -116121959 + MER5B DNA MER1_type 95 171 -7 205 368 0 0 chr5 83509194 83509262 -116120888 - MIR SINE MIR -78 184 117 545 280 104 28 chr5 83509348 83509559 -116120591 - MIR SINE MIR 0 262 36 184 327 82 45 chr5 83509592 83509702 -116120448 - MIR3 SINE MIR -91 117 4 640 188 0 30 chr5 83509755 83509888 -116120262 - LTR40a LTR ERVL 0 519 391 575 203 80 31 chr5 83509957 83510120 -116120030 - LTR40c LTR ERVL -288 177 7 361 290 111 25 chr5 83510651 83510813 -116119337 - MIR SINE MIR 0 262 87 279 355 122 0 chr5 83511233 83511340 -116118810 - L2 LINE L2 -2 3270 3151 198 256 23 0 chr5 83511826 83511869 -116118281 + L2 LINE L2 3137 3180 -92 7560 37 1 0 chr5 83511980 83513611 -116116539 + L1PA5 LINE L1 4521 6154 0 3823 150 28 8 chr5 83514726 83515431 -116114719 + L1MB7 LINE L1 5466 6184 0 390 303 192 30 chr5 83515584 83515855 -116114295 + L1ME1 LINE L1 5268 5582 -539 184 326 53 11 chr5 83516214 83516309 -116113841 + L2 LINE L2 3215 3313 0 224 333 122 35 chr5 83516442 83516844 -116113306 - L2 LINE L2 -596 2718 2282 399 305 104 13 chr5 83516886 83517040 -116113110 + MIR SINE MIR 5 172 -90 207 0 0 0 chr5 83517552 83517575 -116112575 + (T)n Simple_repeat Simple_repeat 1 23 0 503 278 67 45 chr5 83521941 83522164 -116107986 + MIR SINE MIR 1 228 -34 2125 131 0 0 chr5 83522311 83522601 -116107549 - AluSx SINE Alu -22 290 1 615 266 20 60 chr5 83523285 83523537 -116106613 + MIR SINE MIR 21 262 0 301 297 159 0 chr5 83524324 83524469 -116105681 - MER117 DNA MER1_type -26 171 4 1350 231 67 17 chr5 83524593 83525012 -116105138 + L1ME1 LINE L1 5696 6135 -31 2356 94 0 0 chr5 83525416 83525715 -116104435 - AluSg SINE Alu -11 299 1 380 260 10 0 chr5 83526104 83526208 -116103942 + L1MEd LINE L1 280 384 -5735 1779 163 0 39 chr5 83526434 83526741 -116103409 + AluJo SINE Alu 7 301 -11 515 299 116 28 chr5 83527124 83527458 -116102692 - L1MEd LINE L1 -3549 2580 2213 743 283 82 18 chr5 83527612 83527861 -116102289 + L1ME3 LINE L1 5014 5246 -916 1860 188 0 0 chr5 83527861 83528169 -116101981 + AluJo SINE Alu 1 308 -4 743 283 82 18 chr5 83528169 83528789 -116101361 + L1ME3 LINE L1 5246 5944 -218 1294 256 71 92 chr5 83529200 83529482 -116100668 + HAL1 LINE L1 1379 1666 -841 2408 124 14 14 chr5 83529482 83529846 -116100304 + THE1B LTR MaLR 1 364 0 1294 256 71 92 chr5 83529846 83530568 -116099582 + HAL1 LINE L1 1666 2361 -146 529 230 18 54 chr5 83530853 83531075 -116099075 - L1MEd LINE L1 -4928 1191 978 5300 56 18 0 chr5 83531115 83531779 -116098371 - L1PA5 LINE L1 -3 6151 5476 6705 22 13 0 chr5 83531779 83532608 -116097542 - L1PA3 LINE L1 -3 6152 5313 * 25873 42 1 2 chr5 83532588 83536082 -116094068 - L1PA5 LINE L1 -663 5491 2000 21 0 0 0 chr5 83536326 83536347 -116093803 + AT_rich Low_complexity Low_complexity 1 21 0 963 162 0 65 chr5 83536348 83536513 -116093637 - L1MA6 LINE L1 -1 6299 6125 1888 149 0 3 chr5 83536513 83536801 -116093349 + AluJb SINE Alu 1 287 -25 252 0 0 0 chr5 83536801 83536829 -116093321 + (TTAA)n Simple_repeat Simple_repeat 4 31 0 963 162 0 65 chr5 83536829 83536878 -116093272 - L1MA6 LINE L1 -173 6127 6098 1005 166 155 5 chr5 83537408 83537601 -116092549 + AluJb SINE Alu 86 307 -5 212 227 15 30 chr5 83537610 83537676 -116092474 + (ATTAG)n Simple_repeat Simple_repeat 4 68 0 959 284 122 50 chr5 83537783 83537902 -116092248 + L2 LINE L2 2601 2710 -603 2410 67 0 3 chr5 83537902 83538202 -116091948 + AluY SINE Alu 1 299 -12 959 284 122 50 chr5 83538202 83538325 -116091825 + L2 LINE L2 2710 2823 -490 2226 138 67 45 chr5 83538325 83538365 -116091785 - MSTA LTR MaLR 0 428 390 2238 108 7 0 chr5 83538365 83538671 -116091479 + AluSg1 SINE Alu 1 308 -1 2226 138 67 45 chr5 83538671 83539049 -116091101 - MSTA LTR MaLR -38 390 1 959 284 122 50 chr5 83539049 83539474 -116090676 + L2 LINE L2 2823 3313 0 297 207 8 83 chr5 83539591 83539712 -116090438 - L1ME4a LINE L1 -33 6088 5977 488 294 55 43 chr5 83539861 83540276 -116089874 - L1ME4a LINE L1 -241 5880 5461 1493 159 25 103 chr5 83540312 83540476 -116089674 - AluJo SINE Alu -16 296 168 1855 181 3 7 chr5 83540476 83540786 -116089364 - AluJb SINE Alu 0 312 4 1493 159 25 103 chr5 83540786 83540941 -116089209 - AluJo SINE Alu -144 168 2 236 269 42 34 chr5 83541023 83541142 -116089008 - HAL1b LINE L1 -439 909 790 232 191 43 0 chr5 83541198 83541245 -116088905 - HAL1b LINE L1 -437 911 863 359 272 39 95 chr5 83541872 83542047 -116088103 - HAL1 LINE L1 -1027 1480 1297 2033 123 31 3 chr5 83542047 83542339 -116087811 - AluSx SINE Alu -12 300 1 359 272 39 95 chr5 83542339 83542751 -116087399 - HAL1 LINE L1 -1210 1297 926 1817 234 67 47 chr5 83542764 83543345 -116086805 - MLT1E LTR MaLR 0 593 1 513 210 32 25 chr5 83543544 83543822 -116086328 + MLT1E1 LTR MaLR 57 346 -308 * 1023 232 21 165 chr5 83543795 83544032 -116086118 + MLT1E LTR MaLR 254 545 -48 253 98 78 20 chr5 83544052 83544103 -116086047 - MLT1D LTR MaLR 0 505 452 627 279 58 5 chr5 83545803 83545993 -116084157 + MIR SINE MIR 2 201 -61 190 295 16 16 chr5 83550143 83550204 -116079946 + L2 LINE L2 3211 3271 -1 23 33 0 0 chr5 83550307 83550337 -116079813 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 83550766 83550788 -116079362 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 83551379 83551407 -116078743 + AT_rich Low_complexity Low_complexity 1 28 0 633 186 0 0 chr5 83551531 83551633 -116078517 - FLAM_A SINE Alu -27 115 14 190 175 0 140 chr5 83551635 83551692 -116078458 - MIR3 SINE MIR -53 155 107 230 277 15 15 chr5 83551746 83551811 -116078339 + L2 LINE L2 3207 3271 -1 2316 64 4 0 chr5 83552403 83552717 -116077433 - AluY SINE Alu 0 315 1 466 271 52 26 chr5 83552977 83553169 -116076981 - L2 LINE L2 -60 3253 3057 528 255 143 30 chr5 83553175 83553540 -116076610 - L1MC4a LINE L1 -1637 6171 5766 5621 235 87 72 chr5 83553602 83554021 -116076129 - L2 LINE L2 -337 2977 2566 1894 104 165 12 chr5 83554021 83554349 -116075801 - MER83B LTR ERV1 0 378 1 5621 235 87 72 chr5 83554349 83556371 -116073779 - L2 LINE L2 -748 2566 500 417 204 0 0 chr5 83556546 83556634 -116073516 - L2 LINE L2 -1495 1819 1732 27 29 0 0 chr5 83556844 83556878 -116073272 + AT_rich Low_complexity Low_complexity 1 34 0 2545 116 29 10 chr5 83556923 83557337 -116072813 - L1MA4 LINE L1 -14 6286 5865 258 213 62 12 chr5 83557896 83557976 -116072174 - LTR67 LTR ERVL -380 177 94 180 297 182 42 chr5 83561233 83561398 -116068752 + MIR3 SINE MIR 21 208 0 220 234 76 131 chr5 83563632 83563777 -116066373 + MIR SINE MIR 5 141 -67 733 146 0 95 chr5 83565017 83565154 -116064996 + FLAM_A SINE Alu 1 124 -9 237 279 189 47 chr5 83566932 83567122 -116063028 + L2 LINE L2 2842 3058 -214 26 0 0 0 chr5 83568003 83568029 -116062121 + AT_rich Low_complexity Low_complexity 1 26 0 204 179 0 0 chr5 83568131 83568170 -116061980 + (CGTG)n Simple_repeat Simple_repeat 1 39 0 770 226 38 19 chr5 83568437 83568653 -116061497 + MIR SINE MIR 7 225 -37 310 251 42 65 chr5 83569866 83570020 -116060130 + MIR3 SINE MIR 56 205 -3 312 333 49 8 chr5 83570991 83571114 -116059036 - L1ME4a LINE L1 -1 6120 5993 31 0 0 0 chr5 83571563 83571594 -116058556 + AT_rich Low_complexity Low_complexity 1 31 0 1808 171 30 10 chr5 83572685 83572984 -116057166 - AluJo SINE Alu -5 307 3 894 163 78 0 chr5 83573005 83573171 -116056979 + MER58A DNA MER1_type 38 216 -8 359 305 68 34 chr5 83575190 83575375 -116054775 - MIR SINE MIR -54 208 23 264 286 163 31 chr5 83575639 83575737 -116054413 - L2 LINE L2 0 3272 3162 2345 103 3 0 chr5 83576231 83576542 -116053608 - AluSx SINE Alu 0 312 1 3410 252 72 32 chr5 83576617 83577935 -116052215 - L2 LINE L2 -1 3312 1936 238 352 0 11 chr5 83578272 83578363 -116051787 + MER5A DNA MER1_type 2 91 -98 2586 61 0 0 chr5 83579179 83579490 -116050660 - AluY SINE Alu 0 311 1 218 321 100 40 chr5 83580282 83580422 -116049728 + MER5A DNA MER1_type 19 155 -23 288 91 0 0 chr5 83580890 83580934 -116049216 + (TC)n Simple_repeat Simple_repeat 1 44 0 180 77 0 0 chr5 83580936 83580962 -116049188 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 22 0 0 0 chr5 83581002 83581024 -116049126 + AT_rich Low_complexity Low_complexity 1 22 0 374 292 56 62 chr5 83581245 83581440 -116048710 + L1MEd LINE L1 6 199 -5920 2262 119 0 0 chr5 83581696 83581999 -116048151 + AluSx SINE Alu 1 303 -9 470 333 22 22 chr5 83582167 83582389 -116047761 + L1MEd LINE L1 683 904 -5215 295 234 36 7 chr5 83582532 83582669 -116047481 + (TA)n Simple_repeat Simple_repeat 2 142 0 424 268 43 51 chr5 83582674 83582909 -116047241 + L1MEd LINE L1 1025 1257 -4862 244 280 95 30 chr5 83583037 83583237 -116046913 + L1ME LINE L1 5672 5884 -280 23 78 0 0 chr5 83583543 83583594 -116046556 + AT_rich Low_complexity Low_complexity 1 51 0 24 0 0 0 chr5 83583711 83583735 -116046415 + AT_rich Low_complexity Low_complexity 1 24 0 232 286 20 0 chr5 83585238 83585287 -116044863 + L2 LINE L2 3205 3254 -18 1687 184 10 7 chr5 83586367 83586655 -116043495 + AluJo SINE Alu 1 289 -23 26 30 0 0 chr5 83587458 83587491 -116042659 + AT_rich Low_complexity Low_complexity 1 33 0 423 0 0 0 chr5 83588123 83588170 -116041980 + (TG)n Simple_repeat Simple_repeat 2 48 0 2136 93 3 33 chr5 83588662 83588962 -116041188 + AluSx SINE Alu 1 291 -21 426 299 132 8 chr5 83590804 83591055 -116039095 + L1MEd LINE L1 2910 3191 -2938 1082 146 40 5 chr5 83591563 83591762 -116038388 - MER2 DNA MER2_type -139 206 1 224 59 29 0 chr5 83592409 83592443 -116037707 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 457 189 165 98 chr5 83592451 83592615 -116037535 - MER5A DNA MER1_type -3 186 12 563 344 53 21 chr5 83593776 83594061 -116036089 + L2 LINE L2 2682 2975 -339 431 206 157 0 chr5 83594061 83594163 -116035987 + L2 LINE L2 3196 3313 0 221 318 35 12 chr5 83595023 83595108 -116035042 - L2 LINE L2 -9 3263 3177 2474 96 0 0 chr5 83595358 83595670 -116034480 - AluSx SINE Alu 0 312 1 2032 162 57 29 chr5 83595859 83596321 -116033829 - L1MB2 LINE L1 -37 6134 5663 1038 199 199 33 chr5 83596509 83596876 -116033274 - MSTC LTR MaLR 0 428 1 6181 230 87 30 chr5 83596877 83598516 -116031634 - MSTC-int LTR MaLR -1 1734 2 844 161 97 27 chr5 83598534 83598830 -116031320 - MSTD LTR MaLR -33 363 1 1934 160 0 19 chr5 83599582 83599900 -116030250 + AluJo SINE Alu 1 312 0 207 0 0 0 chr5 83600275 83600298 -116029852 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 794 213 61 0 chr5 83602256 83602453 -116027697 + MER3 DNA MER1_type 1 209 0 1886 164 14 42 chr5 83603192 83603546 -116026604 - MER2 DNA MER2_type 0 344 1 2078 135 3 0 chr5 83604177 83604474 -116025676 - AluSx SINE Alu -14 298 1 2606 148 49 62 chr5 83605641 83606209 -116023941 - L1MB7 LINE L1 0 6184 5624 1617 190 7 7 chr5 83606537 83606832 -116023318 + AluJo SINE Alu 10 304 -8 2318 125 0 0 chr5 83606929 83607241 -116022909 + AluSx SINE Alu 1 312 0 2475 162 28 13 chr5 83607241 83607710 -116022440 + L1MA7 LINE L1 5814 6289 -2 1995 121 40 0 chr5 83608142 83608446 -116021704 + AluSx SINE Alu 1 315 0 23 33 0 0 chr5 83608713 83608743 -116021407 + AT_rich Low_complexity Low_complexity 1 30 0 2042 143 0 0 chr5 83610667 83610946 -116019204 - AluSx SINE Alu -33 279 1 192 77 0 0 chr5 83610967 83610993 -116019157 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 711 277 5 27 chr5 83611336 83611556 -116018594 + L2 LINE L2 3099 3313 0 692 230 6 56 chr5 83612092 83612270 -116017880 - MER69A DNA AcHobo -8 169 1 516 210 8 32 chr5 83613229 83613353 -116016797 - MER5B DNA MER1_type -43 135 15 324 48 0 0 chr5 83613364 83613406 -116016744 + (TG)n Simple_repeat Simple_repeat 1 42 0 994 219 11 0 chr5 83613750 83613937 -116016213 + MER5A DNA MER1_type 1 189 0 3237 186 28 31 chr5 83614247 83614316 -116015834 - L1MB8 LINE L1 0 6178 6110 1766 179 10 3 chr5 83614316 83614617 -116015533 + AluJb SINE Alu 1 303 -9 3237 186 28 31 chr5 83614617 83615219 -116014931 - L1MB8 LINE L1 -68 6110 5509 233 217 150 0 chr5 83615220 83615280 -116014870 - L1MCc LINE L1 -4301 2263 2195 925 68 0 8 chr5 83615318 83615435 -116014715 - AluSg/x SINE Alu -26 286 171 2836 199 87 14 chr5 83615435 83616347 -116013803 - L1MCc LINE L1 -4518 2227 1064 2208 160 17 0 chr5 83616348 83616698 -116013452 + MER47A DNA MER2_type 11 366 0 1917 226 34 42 chr5 83616699 83616783 -116013367 - L1MCc LINE L1 -4967 1078 995 1665 181 115 0 chr5 83616783 83617131 -116013019 + MLT1B LTR MaLR 1 388 -2 1917 226 34 42 chr5 83617131 83617576 -116012574 - L1MCc LINE L1 -5050 995 553 1675 295 21 20 chr5 83617644 83618206 -116011944 - L1MCc LINE L1 -5482 563 1 1975 208 13 11 chr5 83618233 83618689 -116011461 - L1M4 LINE L1 -1538 4608 4152 815 160 7 42 chr5 83618733 83618877 -116011273 - AluSq SINE Alu -93 220 82 1688 181 0 20 chr5 83619117 83619421 -116010729 - AluJo SINE Alu -14 298 1 24 32 0 0 chr5 83619627 83619658 -116010492 + AT_rich Low_complexity Low_complexity 1 31 0 369 102 0 0 chr5 83619704 83619763 -116010387 + (CA)n Simple_repeat Simple_repeat 2 60 0 864 234 129 42 chr5 83620151 83620437 -116009713 - MER102b DNA MER1_type -28 313 3 265 272 101 51 chr5 83620688 83620846 -116009304 - MIR3 SINE MIR -28 180 15 521 184 35 154 chr5 83621974 83622175 -116007975 - MER45A DNA AcHobo -1 177 1 2296 114 3 0 chr5 83622432 83622740 -116007410 - AluSx SINE Alu -3 309 1 21 36 0 0 chr5 83622742 83622770 -116007380 + AT_rich Low_complexity Low_complexity 1 28 0 2306 108 7 0 chr5 83622902 83623208 -116006942 + AluSg SINE Alu 1 308 -2 415 225 198 57 chr5 83623985 83624180 -116005970 - MIR SINE MIR -24 238 23 2035 113 48 10 chr5 83624251 83624544 -116005606 + AluSp SINE Alu 2 305 -8 2396 181 126 12 chr5 83624691 83625198 -116004952 + MLT1F1 LTR MaLR 3 567 0 184 265 29 59 chr5 83627434 83627502 -116002648 - MIR SINE MIR -56 152 87 1420 36 6 0 chr5 83627941 83628140 -116002010 + L1PA3 LINE L1 5967 6166 0 4818 108 56 28 chr5 83628141 83628915 -116001235 + L1PB2 LINE L1 5354 6148 -3 373 217 0 0 chr5 83629030 83629113 -116001037 - L1MB8 LINE L1 0 6178 6096 696 285 66 33 chr5 83629498 83629740 -116000410 + MIR SINE MIR 13 262 0 310 230 95 14 chr5 83629742 83629816 -116000334 + L2 LINE L2 3138 3217 -55 231 88 0 0 chr5 83629928 83629962 -116000188 + (CA)n Simple_repeat Simple_repeat 2 35 0 23 54 0 0 chr5 83630314 83630351 -115999799 + AT_rich Low_complexity Low_complexity 1 37 0 502 103 0 0 chr5 83630677 83630745 -115999405 - Alu SINE Alu -13 299 232 2234 100 0 0 chr5 83631292 83631593 -115998557 - AluSx SINE Alu 0 301 1 538 274 67 40 chr5 83631912 83632135 -115998015 + L1ME1 LINE L1 18 246 -6613 2069 207 43 41 chr5 83632467 83632955 -115997195 + MLT1D LTR MaLR 15 503 -2 2494 231 36 32 chr5 83632963 83633556 -115996594 + L1ME1 LINE L1 2902 3500 -3457 1577 147 98 11 chr5 83633556 83633821 -115996329 - AluJo SINE Alu -24 288 1 2494 231 36 32 chr5 83633821 83634040 -115996110 + L1ME1 LINE L1 3500 3717 -3240 2261 114 12 12 chr5 83634040 83634382 -115995768 - L1M2 LINE L1 -614 5686 5345 * 7001 203 73 83 chr5 83634373 83634876 -115995274 + L1ME1 LINE L1 3721 4227 -2750 2197 191 67 61 chr5 83634876 83635368 -115994782 - LTR42 LTR ERVL 0 495 1 7001 203 73 83 chr5 83635368 83636375 -115993775 + L1ME1 LINE L1 4227 5242 -1735 2198 69 41 10 chr5 83636375 83636666 -115993484 + AluY SINE Alu 1 300 -11 7001 203 73 83 chr5 83636666 83636855 -115993295 + L1ME1 LINE L1 5242 5431 -1546 2336 96 66 36 chr5 83636855 83637219 -115992931 - THE1C LTR MaLR 0 375 1 7001 203 73 83 chr5 83637219 83638523 -115991627 + L1ME1 LINE L1 5431 6685 -292 1015 200 115 0 chr5 83638524 83638724 -115991426 - MER58A DNA MER1_type -1 223 1 1148 211 46 36 chr5 83638725 83639029 -115991121 + L1MB8 LINE L1 5871 6177 -1 1691 171 0 36 chr5 83639297 83639429 -115990721 + AluJo SINE Alu 1 136 -176 2142 100 7 3 chr5 83639429 83639718 -115990432 + AluSx SINE Alu 1 290 -22 1798 89 0 36 chr5 83639726 83640012 -115990138 + AluY SINE Alu 46 322 0 1691 171 0 36 chr5 83640012 83640174 -115989976 + AluJo SINE Alu 143 294 -18 2145 127 3 3 chr5 83641627 83641935 -115988215 - AluSg SINE Alu 0 310 3 225 323 77 8 chr5 83642134 83642264 -115987886 - LTR67 LTR ERVL -46 511 373 202 196 78 0 chr5 83643138 83643189 -115986961 - MER91C DNA MER1_type -58 82 28 465 247 0 0 chr5 83643194 83643291 -115986859 + MIR SINE MIR 158 254 -8 182 237 366 0 chr5 83643310 83643403 -115986747 + MIR SINE MIR 132 258 -4 2324 102 0 13 chr5 83645464 83645779 -115984371 - AluSx SINE Alu -1 311 1 271 317 40 0 chr5 83646045 83646146 -115984004 - MIR3 SINE MIR -29 179 75 1617 311 114 66 chr5 83647176 83647590 -115982560 + L2 LINE L2 1226 1619 -1694 2196 145 0 0 chr5 83647590 83647901 -115982249 - AluSx SINE Alu 0 312 2 1617 311 114 66 chr5 83647901 83649466 -115980684 + L2 LINE L2 1619 3298 -15 25 0 0 0 chr5 83649583 83649608 -115980542 + AT_rich Low_complexity Low_complexity 1 25 0 261 57 0 0 chr5 83650102 83650137 -115980013 + (TG)n Simple_repeat Simple_repeat 2 36 0 312 295 37 0 chr5 83650591 83650721 -115979429 + MIR SINE MIR 13 150 -58 384 22 0 0 chr5 83650988 83651033 -115979117 + (TG)n Simple_repeat Simple_repeat 2 46 0 396 258 77 26 chr5 83651472 83651627 -115978523 + MLT1K LTR MaLR 420 582 -6 2257 118 0 3 chr5 83651653 83651959 -115978191 + AluSx SINE Alu 1 305 -7 262 221 0 9 chr5 83652158 83652220 -115977930 + MIR SINE MIR 62 120 -96 419 284 92 0 chr5 83652378 83652519 -115977631 + L2 LINE L2 3160 3313 0 466 358 58 21 chr5 83653584 83653824 -115976326 + MIR SINE MIR 14 262 0 230 275 62 0 chr5 83653833 83653913 -115976237 + MIR SINE MIR 174 258 -4 2518 80 3 6 chr5 83654030 83654344 -115975806 + AluSp SINE Alu 1 313 0 21 0 0 0 chr5 83654789 83654810 -115975340 + AT_rich Low_complexity Low_complexity 1 21 0 1551 262 56 51 chr5 83655122 83655851 -115974299 - L1MEd LINE L1 -5364 755 23 202 269 180 36 chr5 83656091 83656258 -115973892 - L2 LINE L2 -1 3312 3122 788 322 98 61 chr5 83656386 83657159 -115972991 - L2 LINE L2 -348 2966 2165 352 275 28 21 chr5 83657161 83657303 -115972847 - L2 LINE L2 -1384 1930 1788 2413 65 3 0 chr5 83657303 83657595 -115972555 - AluY SINE Alu -18 293 1 514 231 102 78 chr5 83657815 83658046 -115972104 - MIR SINE MIR 0 262 23 868 161 21 57 chr5 83658046 83658239 -115971911 - L1MA7 LINE L1 0 6291 6106 514 231 102 78 chr5 83658239 83658262 -115971888 - MIR SINE MIR -239 23 2 286 136 0 0 chr5 83659736 83659780 -115970370 + MADE1 DNA Mariner 1 44 -36 409 259 15 23 chr5 83662245 83662376 -115967774 + MIR SINE MIR 16 145 -63 243 322 0 46 chr5 83662537 83662624 -115967526 + L2 LINE L2 3182 3264 -8 245 272 140 0 chr5 83663341 83663455 -115966695 - L2 LINE L2 0 3272 3143 507 260 33 29 chr5 83664739 83664919 -115965231 - L1ME3 LINE L1 0 6170 5993 186 103 0 0 chr5 83665115 83665144 -115965006 + (CA)n Simple_repeat Simple_repeat 2 30 0 478 265 47 24 chr5 83665397 83665567 -115964583 + MIR SINE MIR 34 207 -55 782 257 40 5 chr5 83665726 83665928 -115964222 + MER3 DNA MER1_type 1 209 0 440 320 27 41 chr5 83667184 83667403 -115962747 - MIR SINE MIR -23 239 24 872 189 0 30 chr5 83668048 83668217 -115961933 - FRAM SINE Alu -2 164 1 2231 110 3 7 chr5 83668271 83668570 -115961580 - AluSg SINE Alu -11 299 2 2284 112 0 6 chr5 83672063 83672377 -115957773 - AluSx SINE Alu 0 312 1 589 283 11 27 chr5 83672422 83672606 -115957544 + MIR SINE MIR 18 198 -64 1867 141 0 43 chr5 83672621 83672925 -115957225 + AluJo SINE Alu 1 291 -21 180 135 0 0 chr5 83672976 83673013 -115957137 + (T)n Simple_repeat Simple_repeat 1 37 0 503 218 0 0 chr5 83674182 83674283 -115955867 + MER5A DNA MER1_type 9 109 -80 180 250 59 29 chr5 83674329 83674397 -115955753 + MIR3 SINE MIR 6 75 -133 1991 148 10 0 chr5 83674536 83674841 -115955309 + AluSx SINE Alu 1 308 -4 2968 6 0 0 chr5 83675734 83676047 -115954103 + AluYb8 SINE Alu 1 313 -5 3745 133 43 13 chr5 83676681 83677003 -115953147 - L1PA16 LINE L1 0 6166 5855 2470 68 0 3 chr5 83677003 83677299 -115952851 - AluY SINE Alu -16 295 1 3745 133 43 13 chr5 83677299 83677599 -115952551 - L1PA16 LINE L1 -311 5855 5525 2283 228 111 42 chr5 83677599 83678171 -115951979 - L1MC4 LINE L1 -225 7817 7286 2292 107 0 19 chr5 83678171 83678480 -115951670 + AluSx SINE Alu 2 304 -8 2283 228 111 42 chr5 83678480 83678549 -115951601 - L1MC4 LINE L1 -756 7286 7223 2135 142 0 7 chr5 83678549 83678859 -115951291 + AluJo SINE Alu 1 308 -4 2283 228 111 42 chr5 83678859 83679063 -115951087 - L1MC4 LINE L1 -819 7223 6913 272 225 17 117 chr5 83679635 83679755 -115950395 + MER5B DNA MER1_type 1 108 -70 260 317 70 86 chr5 83680330 83680759 -115949391 - L1MEd LINE L1 -5394 725 304 281 287 78 0 chr5 83680838 83680953 -115949197 - L1MEd LINE L1 -5935 184 61 1854 180 50 54 chr5 83681121 83681581 -115948569 + MLT1C LTR MaLR 3 460 -7 485 255 106 11 chr5 83682216 83682404 -115947746 + MIR SINE MIR 57 262 0 285 232 12 143 chr5 83683910 83684078 -115946072 + MIR SINE MIR 88 233 -29 365 42 0 0 chr5 83684202 83684250 -115945900 + U5 snRNA snRNA 2 49 -67 1883 64 4 4 chr5 83684293 83684560 -115945590 - AluY SINE Alu 0 316 50 230 81 27 0 chr5 83684740 83684777 -115945373 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 2489 80 10 6 chr5 83687100 83687411 -115942739 - AluSx SINE Alu 0 312 1 1867 132 331 48 chr5 83688682 83689159 -115940991 - LTR18B LTR ERVL 0 614 3 1936 157 10 3 chr5 83689424 83689723 -115940427 + AluJo SINE Alu 1 301 -11 1025 177 21 0 chr5 83692432 83692618 -115937532 - L1MD2 LINE L1 -7 6352 6163 1146 136 6 0 chr5 83693618 83693780 -115936370 + AluSx SINE Alu 1 163 -149 2390 102 0 0 chr5 83693828 83694131 -115936019 - AluSx SINE Alu -9 303 1 402 57 0 0 chr5 83694909 83694962 -115935188 + (CA)n Simple_repeat Simple_repeat 2 54 0 228 182 0 0 chr5 83695073 83695117 -115935033 + (TAA)n Simple_repeat Simple_repeat 1 44 0 534 286 112 13 chr5 83695119 83695343 -115934807 - MIR SINE MIR -1 261 16 1992 111 7 37 chr5 83696132 83696305 -115933845 - AluSx SINE Alu -4 308 146 2538 61 0 0 chr5 83696305 83696601 -115933549 - AluY SINE Alu -14 297 2 1992 111 7 37 chr5 83696601 83696724 -115933426 - AluSx SINE Alu -166 146 21 3444 196 0 12 chr5 83696821 83697511 -115932639 - L1 LINE L1 -1056 5090 4409 2099 114 16 29 chr5 83697633 83697941 -115932209 - AluSx SINE Alu -8 304 1 256 260 41 7 chr5 83698358 83698504 -115931646 + L1MC4a LINE L1 3121 3271 -2875 290 380 96 24 chr5 83698504 83698880 -115931270 + L2 LINE L2 2491 2893 -421 3520 142 116 123 chr5 83698886 83699059 -115931091 - L1MC3 LINE L1 0 7785 7612 2070 78 60 0 chr5 83699059 83699328 -115930822 - AluY SINE Alu -26 285 1 3520 142 116 123 chr5 83699328 83699760 -115930390 - L1MC3 LINE L1 -173 7612 7109 241 279 25 0 chr5 83699760 83699839 -115930311 - MLT1F1 LTR MaLR -436 131 51 3520 142 116 123 chr5 83699839 83700129 -115930021 - L1MC3 LINE L1 -676 7109 6818 935 129 0 0 chr5 83700129 83700253 -115929897 + AluJo/FLAM SINE Alu 1 124 -188 1912 122 0 0 chr5 83700255 83700517 -115929633 + AluSq SINE Alu 1 262 -51 1583 185 103 12 chr5 83700566 83700906 -115929244 - L1MC3 LINE L1 -957 6828 6458 383 328 166 9 chr5 83700948 83701286 -115928864 + L2 LINE L2 2923 3313 0 779 286 137 29 chr5 83701291 83701920 -115928230 + L1MC4a LINE L1 4072 4632 -1655 2597 44 0 0 chr5 83701920 83702217 -115927933 + AluY SINE Alu 1 297 -14 779 286 137 29 chr5 83702217 83702915 -115927235 + L1MC4a LINE L1 4632 5544 -743 2480 236 37 13 chr5 83702944 83703571 -115926579 + L1ME2 LINE L1 5488 6129 -35 286 288 111 45 chr5 83703653 83703896 -115926254 + L1MC4a LINE L1 5627 5885 -1923 807 158 0 0 chr5 83706649 83706769 -115923381 - FLAM_A SINE Alu -12 130 11 413 219 39 112 chr5 83708275 83708453 -115921697 + MIR SINE MIR 46 210 -52 1446 242 106 62 chr5 83708775 83709501 -115920649 - MER49 LTR ERV1 0 923 1 293 317 114 30 chr5 83709594 83709761 -115920389 - L3 LINE CR1 -2 1575 1395 254 298 139 36 chr5 83710024 83710276 -115919874 - MLT1J LTR MaLR -95 416 139 225 0 0 0 chr5 83712582 83712607 -115917543 + (A)n Simple_repeat Simple_repeat 1 25 0 409 299 125 5 chr5 83714938 83715122 -115915028 + MIR SINE MIR 47 252 -10 2115 112 4 0 chr5 83715436 83715712 -115914438 + AluSx SINE Alu 9 285 -27 629 213 264 4 chr5 83716507 83716613 -115913537 - MER5C DNA MER1_type -4 320 243 2520 68 7 0 chr5 83716613 83716922 -115913228 + AluY SINE Alu 1 311 0 629 213 264 4 chr5 83716922 83717069 -115913081 - MER5C DNA MER1_type -81 243 1 313 360 72 47 chr5 83717256 83717492 -115912658 + L2 LINE L2 2932 3173 -99 246 192 0 0 chr5 83717551 83717603 -115912547 + (TGGA)n Simple_repeat Simple_repeat 3 54 0 466 279 66 0 chr5 83718354 83718490 -115911660 + MIR SINE MIR 14 158 -104 337 211 116 0 chr5 83719245 83719340 -115910810 + MIR SINE MIR 78 183 -79 330 286 197 0 chr5 83719396 83719543 -115910607 + L3 LINE CR1 1374 1549 -28 2909 157 103 18 chr5 83719849 83720459 -115909691 + MER67C LTR ERV1 49 710 0 701 206 42 18 chr5 83721154 83721319 -115908831 - LTR39 LTR ERV1 -18 765 597 1083 173 31 117 chr5 83721389 83721713 -115908437 - LTR39 LTR ERV1 -476 307 12 2161 91 17 20 chr5 83722258 83722554 -115907596 - AluSx SINE Alu -17 295 1 1534 129 0 5 chr5 83723409 83723626 -115906524 - AluSg/x SINE Alu -8 304 89 315 278 21 52 chr5 83723834 83723990 -115906160 + MIR SINE MIR 4 151 -96 676 279 89 36 chr5 83724411 83725221 -115904929 + L2 LINE L2 2371 3313 0 8835 235 42 19 chr5 83726649 83727644 -115902506 + L1P LINE L1 2139 3110 -3036 2126 130 7 0 chr5 83727644 83727771 -115902379 + AluSg SINE Alu 1 126 -184 194 0 39 0 chr5 83727771 83727797 -115902353 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2126 130 7 0 chr5 83727797 83727976 -115902174 + AluSg SINE Alu 126 309 -1 8835 235 42 19 chr5 83727976 83729178 -115900972 + L1P LINE L1 3110 4406 -1740 342 0 0 0 chr5 83729178 83729216 -115900934 + (CA)n Simple_repeat Simple_repeat 2 39 0 8835 235 42 19 chr5 83729216 83729603 -115900547 + L1P LINE L1 4406 4783 -1363 522 291 31 8 chr5 83729586 83729844 -115900306 + L1 LINE L1 4945 5208 -938 * 1960 112 8 0 chr5 83729987 83730247 -115899903 - AluSx SINE Alu -49 263 2 386 310 0 0 chr5 83730262 83730378 -115899772 - L2 LINE L2 -700 2614 2499 1723 310 180 13 chr5 83730398 83731592 -115898558 - L2 LINE L2 -940 2374 981 1390 180 14 28 chr5 83731839 83732122 -115898028 - AluJo SINE Alu -33 279 1 2096 120 13 0 chr5 83732128 83732437 -115897713 - AluSp SINE Alu 0 313 1 1204 187 32 5 chr5 83732443 83732662 -115897488 - LTR40c LTR ERVL -24 441 217 2142 103 0 45 chr5 83733668 83733978 -115896172 + AluSq SINE Alu 1 296 -17 206 125 21 0 chr5 83734160 83734208 -115895942 + (TA)n Simple_repeat Simple_repeat 1 49 0 243 151 94 19 chr5 83734213 83734319 -115895831 + (TTATA)n Simple_repeat Simple_repeat 1 114 0 418 98 72 18 chr5 83734328 83734774 -115895376 + (TA)n Simple_repeat Simple_repeat 1 470 0 558 150 53 9 chr5 83734903 83735016 -115895134 + L1MB3 LINE L1 6066 6183 0 5593 167 48 20 chr5 83735228 83735836 -115894314 - L1PA16 LINE L1 -40 6126 5537 2373 102 0 0 chr5 83735836 83736139 -115894011 - AluSc SINE Alu -6 303 1 5593 167 48 20 chr5 83736139 83737181 -115892969 - L1PA16 LINE L1 -629 5537 4526 246 32 0 0 chr5 83737181 83737212 -115892938 + (TC)n Simple_repeat Simple_repeat 2 32 0 5593 167 48 20 chr5 83737212 83737386 -115892764 - L1PA16 LINE L1 -1640 4526 4358 2303 99 3 13 chr5 83737386 83737699 -115892451 - AluSg SINE Alu 0 310 1 5593 167 48 20 chr5 83737699 83737967 -115892183 - L1PA16 LINE L1 -1808 4358 3979 615 243 26 12 chr5 83738419 83738594 -115891556 + MER52A LTR ERV1 343 1232 -13 1169 218 15 7 chr5 83738598 83738869 -115891281 - L1PA16 LINE L1 -2172 3974 3702 1759 125 12 104 chr5 83740006 83740334 -115889816 - AluSx SINE Alu -14 298 1 1221 264 149 19 chr5 83740682 83741508 -115888642 - L1MEd LINE L1 -4728 1582 592 351 0 0 0 chr5 83741868 83741896 -115888254 + (CA)n Simple_repeat Simple_repeat 1 67 0 351 0 0 0 chr5 83741896 83741935 -115888215 + (CA)n Simple_repeat Simple_repeat 2 40 0 2296 86 30 7 chr5 83742270 83742572 -115887578 + AluSc SINE Alu 1 309 0 281 285 81 41 chr5 83742861 83742984 -115887166 - MIR3 SINE MIR -76 132 5 190 143 29 0 chr5 83743441 83743476 -115886674 - L2 LINE L2 -80 3233 3198 213 39 0 0 chr5 83745161 83745187 -115884963 + (TTG)n Simple_repeat Simple_repeat 2 27 0 466 295 120 18 chr5 83747167 83747384 -115882766 + MIR SINE MIR 3 241 -21 665 204 140 6 chr5 83747601 83747758 -115882392 + MER5B DNA MER1_type 1 178 0 378 0 0 0 chr5 83748096 83748138 -115882012 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr5 83748836 83748857 -115881293 + AT_rich Low_complexity Low_complexity 1 21 0 1627 112 5 5 chr5 83748931 83749154 -115880996 - AluSq SINE Alu -90 223 1 248 281 0 0 chr5 83749454 83749511 -115880639 - MIR SINE MIR -6 256 200 2186 115 3 59 chr5 83749511 83749868 -115880282 + MER1B DNA MER1_type 1 337 0 649 164 250 13 chr5 83750162 83750314 -115879836 - MER5A DNA MER1_type -1 188 1 20256 74 21 5 chr5 83750327 83753909 -115876241 + L1PA7 LINE L1 2492 6129 -25 208 70 47 0 chr5 83753936 83753979 -115876171 + (TA)n Simple_repeat Simple_repeat 2 46 0 315 228 75 46 chr5 83755350 83755612 -115874538 - L1ME4a LINE L1 -57 6064 5793 484 278 110 0 chr5 83755642 83755833 -115874317 - L1ME4a LINE L1 -420 5701 5490 1580 191 80 11 chr5 83757278 83757706 -115872444 - MER89 LTR ERV1 0 559 1 674 271 79 10 chr5 83758280 83758483 -115871667 + MIR SINE MIR 19 235 -27 1844 151 46 0 chr5 83759811 83760095 -115870055 - AluJo SINE Alu -15 297 1 429 271 90 8 chr5 83760112 83760258 -115869892 + MIR SINE MIR 36 192 -57 245 245 0 0 chr5 83760280 83760333 -115869817 + MER112 DNA MER1_type 19 71 -189 13507 104 149 6 chr5 83760342 83762764 -115867386 + L1PB1 LINE L1 164 2930 -3933 248 275 7 49 chr5 83762944 83763086 -115867064 + A-rich Low_complexity Low_complexity 5 140 0 5650 92 38 16 chr5 83763205 83764207 -115865943 + L1PB1 LINE L1 5843 6862 -5 495 247 129 67 chr5 83764212 83764568 -115865582 + L1M4 LINE L1 3253 3630 -2516 2287 121 0 3 chr5 83764582 83764895 -115865255 - AluSx SINE Alu 0 312 1 847 195 25 6 chr5 83764901 83765060 -115865090 - FRAM SINE Alu -14 162 1 765 11 0 11 chr5 83765170 83765265 -115864885 + L1PA4 LINE L1 3 96 -6050 37466 31 1 1 chr5 83765265 83770797 -115859353 + L1PA4 LINE L1 623 6155 0 408 267 23 35 chr5 83770847 83771019 -115859131 + MER112 DNA MER1_type 90 259 -1 1777 268 92 47 chr5 83771088 83772408 -115857742 - L1ME LINE L1 -4699 1381 20 2257 130 0 0 chr5 83772629 83772937 -115857213 + AluSx SINE Alu 1 308 -4 708 197 15 0 chr5 83772972 83773104 -115857046 + MER58B DNA MER1_type 193 326 -15 928 246 122 10 chr5 83773133 83773543 -115856607 + L1M4 LINE L1 2163 2618 -3528 527 315 0 0 chr5 83773790 83773939 -115856211 - LTR16B LTR ERVL -315 149 1 1715 160 39 39 chr5 83774329 83774641 -115855509 - AluJo SINE Alu 0 312 1 2315 96 0 7 chr5 83775237 83775538 -115854612 + AluSq SINE Alu 1 299 -14 2416 81 0 0 chr5 83776390 83776686 -115853464 - AluSx SINE Alu -16 296 1 2014 63 0 15 chr5 83776752 83777020 -115853130 + AluY SINE Alu 42 305 -6 4533 230 40 30 chr5 83777445 83778012 -115852138 + L1 LINE L1 2124 2684 -3462 2086 84 0 7 chr5 83778012 83778298 -115851852 - L1PA10 LINE L1 -9 6159 5876 4533 230 40 30 chr5 83778298 83778878 -115851272 + L1 LINE L1 2684 3293 -2853 1753 156 35 7 chr5 83778878 83779160 -115850990 + AluJb SINE Alu 1 290 -22 4533 230 40 30 chr5 83779160 83779587 -115850563 + L1 LINE L1 3293 3714 -2432 277 309 12 0 chr5 83780326 83780407 -115849743 + MIR SINE MIR 72 153 -55 663 254 57 12 chr5 83781503 83781751 -115848399 + MIR SINE MIR 2 260 -2 2060 102 3 0 chr5 83782295 83782610 -115847540 + AluSq SINE Alu 1 316 0 326 356 145 40 chr5 83782762 83783216 -115846934 - L2 LINE L2 -223 3049 2544 2106 74 7 3 chr5 83784423 83784706 -115845444 + AluSx SINE Alu 1 284 -28 2842 129 144 84 chr5 83784746 83785275 -115844875 - Tigger3(Golem) DNA MER2_type 0 3028 2433 2040 97 0 53 chr5 83785275 83785575 -115844575 - AluSc SINE Alu -25 284 1 2842 129 144 84 chr5 83785575 83785852 -115844298 - Tigger3(Golem) DNA MER2_type -595 2433 2174 1041 186 74 0 chr5 83785850 83786081 -115844069 - Tigger3(Golem) DNA MER2_type -2780 249 2 * 419 310 77 13 chr5 83787551 83787706 -115842444 - MIR SINE MIR -75 187 23 1415 191 17 27 chr5 83787709 83788002 -115842148 + AluJb SINE Alu 1 290 -22 2121 99 35 3 chr5 83789613 83789896 -115840254 + AluSc SINE Alu 1 292 -17 2478 84 7 0 chr5 83789948 83790256 -115839894 + AluSx SINE Alu 1 310 -2 468 0 0 0 chr5 83790256 83790308 -115839842 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 24 32 0 0 chr5 83790369 83790400 -115839750 + AT_rich Low_complexity Low_complexity 1 31 0 23 92 0 0 chr5 83791081 83791146 -115839004 + AT_rich Low_complexity Low_complexity 1 65 0 536 290 47 6 chr5 83791905 83792041 -115838109 + MIR SINE MIR 13 159 -103 718 217 29 0 chr5 83792041 83792216 -115837934 + MER104 DNA MER2_type 1 180 0 536 290 47 6 chr5 83792216 83792248 -115837902 + MIR SINE MIR 159 188 -74 207 0 0 0 chr5 83792407 83792430 -115837720 + (A)n Simple_repeat Simple_repeat 1 23 0 21 36 0 0 chr5 83795304 83795332 -115834818 + AT_rich Low_complexity Low_complexity 1 28 0 2141 105 18 0 chr5 83796367 83796652 -115833498 - AluSg SINE Alu -20 290 1 281 261 52 60 chr5 83796865 83796999 -115833151 - L2 LINE L2 0 3313 3181 959 156 0 19 chr5 83797074 83797228 -115832922 - FRAM SINE Alu -15 151 1 200 302 156 40 chr5 83797229 83797454 -115832696 + L2 LINE L2 2122 2372 -942 369 294 135 0 chr5 83797692 83797818 -115832332 + L2 LINE L2 3171 3313 0 227 278 312 29 chr5 83797851 83798024 -115832126 - L2 LINE L2 -221 3092 2871 761 262 26 56 chr5 83798042 83798309 -115831841 + L2 LINE L2 3042 3300 -13 1855 188 124 2 chr5 83798395 83798552 -115831598 - L1MA10 LINE L1 -8 6326 6170 2905 209 83 38 chr5 83798552 83799398 -115830752 - L1MC4 LINE L1 -743 5901 5095 1900 138 149 34 chr5 83799398 83799469 -115830681 - MSTA LTR MaLR -1 427 366 2257 94 3 0 chr5 83799469 83799768 -115830382 + AluSq SINE Alu 1 300 -13 1900 138 149 34 chr5 83799768 83800079 -115830071 - MSTA LTR MaLR -62 366 1 2905 209 83 38 chr5 83800079 83800137 -115830013 - L1MC4 LINE L1 -1549 5095 5041 2204 105 20 0 chr5 83800137 83800432 -115829718 - AluSx SINE Alu -11 301 1 2905 209 83 38 chr5 83800432 83800969 -115829181 - L1MC4 LINE L1 -1603 5041 4977 1646 237 36 49 chr5 83800941 83801468 -115828682 - L1MC4 LINE L1 -5973 569 50 * 925 138 7 123 chr5 83801534 83801685 -115828465 - L1MB8 LINE L1 -5 6173 6065 2373 77 10 0 chr5 83801685 83801984 -115828166 + AluSp SINE Alu 1 302 -11 925 138 7 123 chr5 83801984 83802101 -115828049 - L1MB8 LINE L1 -113 6065 5936 747 269 47 10 chr5 83802104 83802297 -115827853 - L2 LINE L2 -565 2749 2550 438 327 134 24 chr5 83802531 83803039 -115827111 + L1MEd LINE L1 269 832 -5287 180 0 0 0 chr5 83803041 83803061 -115827089 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1554 167 44 75 chr5 83803061 83803223 -115826927 - MLT1A1 LTR MaLR -15 350 185 1936 155 0 19 chr5 83803223 83803533 -115826617 + AluJo SINE Alu 1 304 -8 1554 167 44 75 chr5 83803533 83803730 -115826420 - MLT1A1 LTR MaLR -180 185 2 361 259 119 17 chr5 83803831 83803913 -115826237 + L1MEd LINE L1 895 967 -5343 1959 137 3 7 chr5 83803913 83804205 -115825945 + AluSx SINE Alu 1 291 -21 361 259 119 17 chr5 83804205 83804559 -115825591 + L1MEd LINE L1 967 1417 -4893 22 0 0 0 chr5 83804606 83804628 -115825522 + AT_rich Low_complexity Low_complexity 1 22 0 651 120 0 0 chr5 83804628 83804728 -115825422 + AluSp/q SINE Alu 206 305 -8 308 261 35 17 chr5 83804760 83804875 -115825275 - L2 LINE L2 -208 3105 2989 1682 138 33 41 chr5 83804879 83805242 -115824908 - THE1C LTR MaLR 0 375 16 340 263 88 18 chr5 83855466 83855637 -115774513 - L1ME4a LINE L1 -2 6119 5937 207 63 32 63 chr5 83855667 83855730 -115774420 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 331 242 47 102 chr5 83855759 83855828 -115774322 - L1ME4a LINE L1 -162 5959 5888 2260 94 0 3 chr5 83855828 83856125 -115774025 - AluSc SINE Alu -13 296 1 331 242 47 102 chr5 83856125 83856270 -115773880 - L1ME4a LINE L1 -233 5888 5757 1296 218 109 23 chr5 83856734 83857166 -115772984 + L1MEd LINE L1 2667 3135 -2994 1010 231 35 45 chr5 83857162 83857473 -115772677 + L1ME1 LINE L1 5855 6162 -4 * 2169 111 23 13 chr5 83858342 83858648 -115771502 + AluSc SINE Alu 1 309 0 2501 167 47 9 chr5 83858703 83859153 -115770997 + MLT1C LTR MaLR 1 467 0 1571 204 3 10 chr5 83859591 83859899 -115770251 - AluJo SINE Alu -6 306 1 245 274 43 94 chr5 83861100 83861217 -115768933 - L2 LINE L2 0 3272 3162 16625 136 13 103 chr5 83861418 83864863 -115765287 + L1PA7 LINE L1 12 3147 -2999 17133 83 9 6 chr5 83864963 83867970 -115762180 + L1PA7 LINE L1 3140 6154 0 325 218 184 81 chr5 83867970 83868144 -115762006 - MIR SINE MIR -40 222 31 694 221 15 7 chr5 83868237 83868373 -115761777 - FRAM SINE Alu -39 137 1 1131 229 10 62 chr5 83868659 83868758 -115761392 + L1MC5 LINE L1 5556 5659 -2149 2390 101 7 0 chr5 83868758 83869066 -115761084 + AluSx SINE Alu 1 310 -2 1131 229 10 62 chr5 83869066 83869258 -115760892 + L1MC5 LINE L1 5659 5832 -1976 1698 138 3 21 chr5 83869263 83869545 -115760605 - Tigger3(Golem) DNA MER2_type 0 3038 2762 1933 137 0 13 chr5 83869551 83869851 -115760299 - AluSg SINE Alu -12 298 3 1877 28 0 0 chr5 83869851 83870062 -115760088 + SVA Other Other 748 960 -426 1240 218 150 85 chr5 83870695 83871024 -115759126 + L1MC5 LINE L1 6616 6999 -962 2319 91 0 16 chr5 83871024 83871332 -115758818 + AluSq SINE Alu 3 305 -8 1240 218 150 85 chr5 83871332 83871567 -115758583 + L1MC5 LINE L1 6999 7217 -744 1758 99 99 7 chr5 83871620 83871892 -115758258 + AluSx SINE Alu 1 297 -15 322 242 19 39 chr5 83871892 83872089 -115758061 + L1MC5 LINE L1 7308 7530 -431 4650 129 19 32 chr5 83872121 83872625 -115757525 + Tigger3(Golem) DNA MER2_type 2239 2729 -299 2041 100 9 62 chr5 83872625 83872945 -115757205 - AluSq SINE Alu -10 303 1 4650 129 19 32 chr5 83872945 83873241 -115756909 + Tigger3(Golem) DNA MER2_type 2729 3028 0 493 244 70 29 chr5 83873241 83873413 -115756737 + L1MC5 LINE L1 7720 7898 -63 1732 125 29 22 chr5 83873674 83873791 -115756359 + AluJb SINE Alu 1 116 -196 189 0 0 0 chr5 83873791 83873812 -115756338 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1732 125 29 22 chr5 83873812 83873966 -115756184 + AluJb SINE Alu 116 274 -38 188 311 0 16 chr5 83875435 83875496 -115754654 - L2 LINE L2 -1 3271 3212 2252 102 7 0 chr5 83875503 83875798 -115754352 - AluY SINE Alu 0 311 15 1717 140 29 46 chr5 83876040 83876347 -115753803 - AluJo SINE Alu -10 302 1 348 276 168 0 chr5 83876505 83876639 -115753511 - MIR SINE MIR -14 248 94 359 263 113 65 chr5 83877066 83877211 -115752939 - L2 LINE L2 -1 3312 3155 2461 121 33 33 chr5 83877211 83877575 -115752575 + THE1B LTR MaLR 1 364 0 359 263 113 65 chr5 83877575 83877615 -115752535 - L2 LINE L2 -158 3155 3118 2484 253 76 67 chr5 83877855 83878021 -115752129 - L1ME LINE L1 -4828 1433 1270 2271 110 3 10 chr5 83878021 83878329 -115751821 - AluSx SINE Alu -6 306 1 2484 253 76 67 chr5 83878329 83878458 -115751692 - L1ME LINE L1 -4991 1270 1144 1972 150 0 23 chr5 83878458 83878764 -115751386 - AluJo SINE Alu -13 299 1 2484 253 76 67 chr5 83878764 83878988 -115751162 - L1ME LINE L1 -5117 1144 924 1927 119 7 34 chr5 83878988 83879282 -115750868 - AluSq SINE Alu -5 308 23 2484 253 76 67 chr5 83879282 83880047 -115750103 - L1ME LINE L1 -5337 924 34 621 320 57 49 chr5 83880107 83880457 -115749693 - L2 LINE L2 -578 2736 2384 207 345 35 0 chr5 83880508 83880595 -115749555 - L2 LINE L2 -827 2487 2398 949 241 89 57 chr5 83881266 83881582 -115748568 - MLT1A2 LTR MaLR -48 326 1 * 1206 172 118 30 chr5 83881582 83881912 -115748238 + Charlie1b DNA MER1_type 97 455 -68 1433 138 0 87 chr5 83881914 83882203 -115747947 + AluJo SINE Alu 3 266 -46 251 270 27 0 chr5 83882244 83882318 -115747832 + Charlie1b DNA MER1_type 448 523 0 322 279 128 64 chr5 83882523 83882835 -115747315 + L1M2 LINE L1 480 811 -6038 275 224 191 53 chr5 83883550 83883702 -115746448 - MARNA DNA Mariner -11 575 403 345 222 59 52 chr5 83883971 83884124 -115746026 + MLT1H LTR MaLR 396 549 0 1550 152 0 4 chr5 83884288 83884519 -115745631 + AluJb SINE Alu 1 230 -82 249 108 0 0 chr5 83884528 83884565 -115745585 + (A)n Simple_repeat Simple_repeat 1 37 0 210 283 236 0 chr5 83885070 83885176 -115744974 - MIR3 SINE MIR -14 194 64 442 217 0 0 chr5 83885235 83885318 -115744832 - LTR16C LTR ERVL -14 477 395 474 207 132 132 chr5 83885320 83885388 -115744762 + MER5A DNA MER1_type 10 77 -112 1741 157 0 38 chr5 83885388 83885701 -115744449 + AluJo SINE Alu 1 302 0 474 207 132 132 chr5 83885701 83885805 -115744345 + MER5A DNA MER1_type 76 183 -6 1083 265 85 19 chr5 83886675 83887004 -115743146 - L1 LINE L1 -2305 3841 3478 2139 109 10 3 chr5 83887004 83887306 -115742844 - AluSg SINE Alu -6 304 1 1083 265 85 19 chr5 83887306 83887408 -115742742 - L1 LINE L1 -2668 3478 3384 438 233 29 50 chr5 83887598 83887673 -115742477 + MER5A DNA MER1_type 39 126 -63 2307 96 0 0 chr5 83887673 83887965 -115742185 - AluSg SINE Alu -18 292 1 438 233 29 50 chr5 83887965 83888028 -115742122 + MER5A DNA MER1_type 126 189 0 589 185 131 23 chr5 83888449 83888579 -115741571 - MIR SINE MIR -83 179 36 183 237 85 0 chr5 83888621 83888680 -115741470 - MIR SINE MIR -176 86 23 358 333 8 16 chr5 83888705 83888828 -115741322 - L2 LINE L2 0 3313 3192 651 175 58 0 chr5 83889045 83889182 -115740968 - L1MC4 LINE L1 -135 7907 7763 741 163 13 33 chr5 83889196 83889349 -115740801 + MLT1A1 LTR MaLR 1 150 -215 642 226 142 16 chr5 83889414 83889617 -115740533 + MLT1D LTR MaLR 188 505 0 504 282 27 0 chr5 83889629 83889778 -115740372 - L1MC4 LINE L1 -1431 6611 6459 189 0 0 0 chr5 83890605 83890626 -115739524 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 561 224 10 94 chr5 83891302 83891494 -115738656 + MLT1K LTR MaLR 411 586 -2 841 184 0 21 chr5 83891703 83891844 -115738306 - AluJo SINE Alu -173 139 2 242 152 0 0 chr5 83892214 83892260 -115737890 + LTR66 LTR ERVL 394 439 -171 846 118 0 0 chr5 83892955 83893065 -115737085 - AluSg/x SINE Alu -27 285 176 2971 9 0 0 chr5 83894755 83895073 -115735077 + AluYb8 SINE Alu 1 318 0 2245 71 0 3 chr5 83895300 83895629 -115734521 - AluSg SINE Alu 0 328 1 225 170 0 0 chr5 83896373 83896388 -115733762 + GA-rich Low_complexity Low_complexity 1 15 -32 2351 108 61 19 chr5 83896388 83896748 -115733402 - THE1C LTR MaLR 0 375 1 225 170 0 0 chr5 83896748 83896779 -115733371 + GA-rich Low_complexity Low_complexity 14 47 0 197 62 0 31 chr5 83899063 83899095 -115731055 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1636 142 3 91 chr5 83899147 83899465 -115730685 - AluJo SINE Alu -22 290 1 2388 88 3 19 chr5 83900161 83900479 -115729671 + AluSp SINE Alu 1 313 0 201 175 0 0 chr5 83901898 83901938 -115728212 + (CA)n Simple_repeat Simple_repeat 1 40 0 1342 180 111 25 chr5 83903892 83904208 -115725942 + MER2 DNA MER2_type 1 343 -1 2402 98 0 0 chr5 83904245 83904552 -115725598 + AluY SINE Alu 1 307 -4 2171 90 30 10 chr5 83904561 83904861 -115725289 + AluSx SINE Alu 7 312 0 2123 96 4 11 chr5 83905495 83905776 -115724374 - AluSx SINE Alu -18 294 16 2194 153 42 0 chr5 83907143 83907476 -115722674 - MER7A DNA MER2_type 0 346 2 340 288 85 1 chr5 83909500 83909638 -115720512 + MIR3 SINE MIR 33 176 -32 1978 141 0 3 chr5 83909823 83910120 -115720030 - AluJb SINE Alu -16 296 1 799 245 29 5 chr5 83910353 83910557 -115719593 + MER3 DNA MER1_type 1 209 0 700 211 20 0 chr5 83911806 83911953 -115718197 + MER3 DNA MER1_type 8 157 -52 2270 88 0 7 chr5 83912090 83912385 -115717765 + AluSg SINE Alu 1 293 -17 2188 106 7 3 chr5 83912771 83913098 -115717052 + AluSx SINE Alu 1 312 0 201 333 0 0 chr5 83914493 83914544 -115715606 + L2 LINE L2 3251 3301 -12 234 382 118 0 chr5 83915595 83915705 -115714445 + L2 LINE L2 3134 3256 -16 409 350 6 22 chr5 83916379 83916559 -115713591 - MER5B DNA MER1_type 0 178 2 433 259 65 9 chr5 83916569 83916677 -115713473 + L2 LINE L2 3159 3272 0 24 0 0 0 chr5 83917502 83917526 -115712624 + AT_rich Low_complexity Low_complexity 1 24 0 23 68 0 0 chr5 83918845 83918889 -115711261 + AT_rich Low_complexity Low_complexity 1 44 0 230 176 20 0 chr5 83920087 83920138 -115710012 + (CATA)n Simple_repeat Simple_repeat 3 54 0 1656 200 13 3 chr5 83920221 83920521 -115709629 - AluJo SINE Alu -9 303 1 23 33 0 0 chr5 83920584 83920614 -115709536 + AT_rich Low_complexity Low_complexity 1 30 0 2056 105 0 4 chr5 83921100 83921377 -115708773 + AluSg SINE Alu 1 276 -34 5881 25 31 13 chr5 83921386 83922070 -115708080 + SVA Other Other 691 1386 0 341 286 111 37 chr5 83922429 83922618 -115707532 - MIR SINE MIR -40 222 20 22 0 0 0 chr5 83922717 83922739 -115707411 + AT_rich Low_complexity Low_complexity 1 22 0 1907 78 103 14 chr5 83922833 83923115 -115707035 + AluSp SINE Alu 1 307 -6 331 289 148 7 chr5 83923666 83923801 -115706349 + L2 LINE L2 3159 3312 -1 27 29 0 0 chr5 83924101 83924135 -115706015 + AT_rich Low_complexity Low_complexity 1 34 0 2068 129 10 0 chr5 83924364 83924667 -115705483 + AluSx SINE Alu 2 307 -5 22 56 0 0 chr5 83926223 83926259 -115703891 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 83926444 83926467 -115703683 + AT_rich Low_complexity Low_complexity 1 23 0 2137 113 7 3 chr5 83926526 83926826 -115703324 + AluSx SINE Alu 3 303 -9 958 171 72 5 chr5 83927280 83927473 -115702677 + MER3 DNA MER1_type 3 208 -1 1041 148 18 0 chr5 83927954 83928123 -115702027 - AluSq SINE Alu -7 306 135 2428 79 0 0 chr5 83928124 83928427 -115701723 - AluY SINE Alu -8 303 1 267 31 0 0 chr5 83928649 83928681 -115701469 + (CAA)n Simple_repeat Simple_repeat 2 33 0 23 33 0 0 chr5 83931757 83931787 -115698363 + AT_rich Low_complexity Low_complexity 1 30 0 2255 103 0 0 chr5 83932016 83932318 -115697832 - AluY SINE Alu -9 302 1 218 339 88 61 chr5 83932651 83933026 -115697124 + L2 LINE L2 2815 3199 -73 2146 108 14 0 chr5 83933297 83933592 -115696558 + AluSx SINE Alu 1 299 -13 381 43 0 0 chr5 83933595 83933642 -115696508 + (TA)n Simple_repeat Simple_repeat 1 47 0 474 273 109 35 chr5 83934375 83934686 -115695464 - L1ME4a LINE L1 -250 5871 5538 326 95 0 0 chr5 83936119 83936161 -115693989 - 5S rRNA rRNA -79 42 1 22 0 0 0 chr5 83936199 83936221 -115693929 + AT_rich Low_complexity Low_complexity 1 22 0 1455 191 37 0 chr5 83938501 83938773 -115691377 - AluJb SINE Alu -30 282 1 237 317 113 54 chr5 83938820 83939060 -115691090 + L2 LINE L2 583 836 -2478 558 121 36 0 chr5 83939498 83939581 -115690569 + MER63 DNA MER1_type 38 749 -87 1167 88 0 12 chr5 83939710 83939870 -115690280 - AluSq SINE Alu -155 158 1 679 224 0 0 chr5 83940434 83940568 -115689582 - AluJo SINE Alu -178 134 1 374 384 78 16 chr5 83940607 83940992 -115689158 - L2 LINE L2 -665 2649 2241 1576 175 0 41 chr5 83941155 83941447 -115688703 + AluJb SINE Alu 3 282 -30 2434 59 7 0 chr5 83941591 83941897 -115688253 - AluY SINE Alu -3 308 1 203 324 108 0 chr5 83942174 83942248 -115687902 - L2 LINE L2 -8 3264 3183 2123 133 3 0 chr5 83942543 83942852 -115687298 + AluSq SINE Alu 4 313 0 2917 3 0 0 chr5 83943479 83943797 -115686353 + AluYb8 SINE Alu 1 318 0 388 273 20 33 chr5 83944519 83944669 -115685481 + MLT1K LTR MaLR 429 576 -12 4234 210 150 38 chr5 83944965 83945801 -115684349 + L1MC4 LINE L1 6458 7199 -843 2303 84 3 3 chr5 83945801 83946097 -115684053 - AluSq SINE Alu -17 296 1 4234 210 150 38 chr5 83946097 83946683 -115683467 + L1MC4 LINE L1 7199 8040 -2 559 302 101 17 chr5 83948301 83948480 -115681670 - MER91A DNA MER1_type -1 195 2 28 0 0 0 chr5 83949158 83949186 -115680964 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr5 83949373 83949409 -115680741 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 83950145 83950167 -115679983 + AT_rich Low_complexity Low_complexity 1 22 0 1677 88 13 4 chr5 83950204 83950430 -115679720 + MER30 DNA MER1_type 1 228 -2 33 0 0 0 chr5 83951123 83951156 -115678994 + AT_rich Low_complexity Low_complexity 1 33 0 1563 184 4 0 chr5 83951554 83951820 -115678330 + AluJb SINE Alu 1 267 -45 1955 161 0 0 chr5 83951895 83952205 -115677945 - AluSx SINE Alu -2 310 1 22 0 0 0 chr5 83955044 83955066 -115675084 + AT_rich Low_complexity Low_complexity 1 22 0 670 361 102 29 chr5 83955589 83956418 -115673732 + L2 LINE L2 2003 2892 -422 402 252 113 40 chr5 83957012 83957163 -115672987 + MIR SINE MIR 65 226 -36 352 307 57 21 chr5 83957364 83957504 -115672646 + L2 LINE L2 3150 3294 -19 434 286 261 25 chr5 83957674 83957957 -115672193 - L3 LINE CR1 -2 1575 1226 22 35 0 0 chr5 83959390 83959419 -115670731 + AT_rich Low_complexity Low_complexity 1 29 0 2216 103 0 6 chr5 83960517 83960829 -115669321 - AluSq SINE Alu -3 310 1 2902 107 43 2 chr5 83961174 83961612 -115668538 - L1PA8 LINE L1 -6 6166 5711 239 364 0 0 chr5 83963444 83963543 -115666607 + L2 LINE L2 2805 2903 -411 4052 231 96 61 chr5 83963895 83964912 -115665238 - L1MC4 LINE L1 -13 8029 6940 341 43 21 0 chr5 83964912 83964959 -115665191 + (TG)n Simple_repeat Simple_repeat 2 49 0 4052 231 96 61 chr5 83964959 83965458 -115664692 - L1MC4 LINE L1 -1102 6940 6460 226 250 83 0 chr5 83965663 83965711 -115664439 + L2 LINE L2 3137 3188 -84 249 320 64 41 chr5 83965870 83966042 -115664108 - L2 LINE L2 -1220 2094 1919 1672 177 7 13 chr5 83966091 83966256 -115663894 - AluJo SINE Alu -14 298 134 1953 135 6 10 chr5 83966256 83966567 -115663583 - AluSg SINE Alu 0 310 1 1672 177 7 13 chr5 83966567 83966701 -115663449 - AluJo SINE Alu -178 134 1 2011 132 0 7 chr5 83967219 83967523 -115662627 - AluSx SINE Alu -10 302 1 296 237 122 23 chr5 83967608 83967739 -115662411 - MIR SINE MIR -1 261 118 30 59 0 0 chr5 83968043 83968094 -115662056 + AT_rich Low_complexity Low_complexity 1 51 0 12800 117 50 83 chr5 83968191 83968510 -115661640 - Tigger1 DNA MER2_type 0 2418 2090 886 143 0 0 chr5 83968510 83968636 -115661514 - AluJb SINE Alu -186 126 1 12800 117 50 83 chr5 83968636 83969273 -115660877 - Tigger1 DNA MER2_type -328 2090 1434 2297 84 7 0 chr5 83969273 83969569 -115660581 + AluSq SINE Alu 4 301 -12 12800 117 50 83 chr5 83969569 83969881 -115660269 - Tigger1 DNA MER2_type -984 1434 1113 1920 143 3 7 chr5 83969881 83970174 -115659976 - AluSx SINE Alu -20 292 1 12800 117 50 83 chr5 83970174 83971277 -115658873 - Tigger1 DNA MER2_type -1305 1113 1 444 252 59 8 chr5 83971415 83971534 -115658616 - MIR3 SINE MIR -1 207 83 443 244 18 133 chr5 83971652 83971754 -115658396 + L2 LINE L2 3115 3179 -134 694 228 88 5 chr5 83971754 83971947 -115658203 - MER3 DNA MER1_type 0 209 1 443 244 18 133 chr5 83971947 83972069 -115658081 + L2 LINE L2 3179 3313 0 21 82 0 0 chr5 83972474 83972523 -115657627 + AT_rich Low_complexity Low_complexity 1 49 0 321 239 0 9 chr5 83972614 83972727 -115657423 - L1ME4a LINE L1 -264 5857 5746 821 163 0 0 chr5 83973612 83973741 -115656409 - FLAM_C SINE Alu -2 131 3 212 280 20 0 chr5 83974301 83974351 -115655799 + L2 LINE L2 3214 3264 -8 823 239 70 24 chr5 83974992 83975205 -115654945 - MER58A DNA MER1_type -1 223 1 919 227 0 0 chr5 83975963 83976135 -115654015 + FAM SINE Alu 4 175 0 39 38 0 0 chr5 83976399 83976452 -115653698 + AT_rich Low_complexity Low_complexity 1 53 0 25 0 0 0 chr5 83977215 83977240 -115652910 + AT_rich Low_complexity Low_complexity 1 25 0 2208 105 0 3 chr5 83978307 83978612 -115651538 + AluSx SINE Alu 1 304 -8 616 268 56 0 chr5 83978800 83978942 -115651208 + MIR3 SINE MIR 31 180 -28 401 0 0 20 chr5 83979338 83979388 -115650762 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 856 158 0 0 chr5 83979390 83979517 -115650633 - AluJb SINE Alu -33 279 153 1990 145 0 7 chr5 83979642 83979945 -115650205 + AluSg SINE Alu 1 301 -9 737 182 0 0 chr5 83979945 83980066 -115650084 - AluJo/FLAM SINE Alu -191 121 1 287 233 93 23 chr5 83980066 83980152 -115649998 - L2 LINE L2 -11 3302 3211 1724 187 48 14 chr5 83980551 83980904 -115649246 + MLT1A1 LTR MaLR 1 365 0 233 214 43 29 chr5 83981918 83981988 -115648162 + (CTTAT)n Simple_repeat Simple_repeat 3 73 0 28 61 0 0 chr5 83982017 83982066 -115648084 + AT_rich Low_complexity Low_complexity 1 49 0 2391 82 0 0 chr5 83982355 83982648 -115647502 - AluSx SINE Alu -19 293 1 1964 105 0 0 chr5 83986389 83986647 -115643503 - AluSg SINE Alu -19 291 34 2229 96 0 0 chr5 83986647 83986927 -115643223 - AluSc SINE Alu -29 280 1 2129 100 11 0 chr5 83987100 83987381 -115642769 + AluSx SINE Alu 1 284 -28 495 0 0 0 chr5 83987381 83987436 -115642714 + (TA)n Simple_repeat Simple_repeat 2 56 0 219 167 0 0 chr5 83987436 83987478 -115642672 + (CA)n Simple_repeat Simple_repeat 1 42 0 2374 70 10 13 chr5 83987716 83988028 -115642122 - AluY SINE Alu 0 311 1 3690 258 98 25 chr5 83988190 83988966 -115641184 + L2 LINE L2 1713 2431 -882 5708 98 19 28 chr5 83988966 83989338 -115640812 + L1PA14 LINE L1 5127 5501 -660 2167 99 0 3 chr5 83989338 83989645 -115640505 + AluSg SINE Alu 1 306 0 5708 98 19 28 chr5 83989645 83990312 -115639838 + L1PA14 LINE L1 5501 6158 -3 3690 258 98 25 chr5 83990312 83990964 -115639186 + L2 LINE L2 2431 3244 -69 1143 190 23 18 chr5 83991268 83991489 -115638661 + MER58A DNA MER1_type 1 222 -2 26 50 0 0 chr5 83992395 83992435 -115637715 + AT_rich Low_complexity Low_complexity 1 40 0 26 82 0 0 chr5 83993036 83993097 -115637053 + AT_rich Low_complexity Low_complexity 1 61 0 300 405 84 5 chr5 83995939 83996154 -115633996 + L2 LINE L2 2394 2625 -689 293 412 27 5 chr5 83996180 83996367 -115633783 + L2 LINE L2 2088 2278 -1036 666 308 138 55 chr5 83996470 83996615 -115633535 + L2 LINE L2 2442 2574 -698 2214 88 10 0 chr5 83996615 83996909 -115633241 + AluSp SINE Alu 1 297 -16 666 308 138 55 chr5 83996909 83997501 -115632649 + L2 LINE L2 2574 3229 -43 257 376 120 0 chr5 83997864 83997997 -115632153 + L2 LINE L2 3111 3259 -13 763 270 60 19 chr5 83998364 83998579 -115631571 + MIR SINE MIR 39 262 0 24 32 0 0 chr5 83998799 83998830 -115631320 + AT_rich Low_complexity Low_complexity 1 31 0 26 30 0 0 chr5 83999046 83999079 -115631071 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 83999254 83999284 -115630866 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5 83999353 83999381 -115630769 + AT_rich Low_complexity Low_complexity 1 28 0 309 263 105 53 chr5 84001970 84002160 -115627990 - L2 LINE L2 -67 3246 3047 218 305 63 11 chr5 84052776 84052871 -115577279 + MIR SINE MIR 88 187 -75 358 346 28 22 chr5 84054290 84054472 -115575678 - MER5A DNA MER1_type 0 189 7 421 308 73 49 chr5 84055233 84055322 -115574828 - L2 LINE L2 -441 2873 2788 1637 142 105 119 chr5 84055322 84055679 -115574471 + MSTA LTR MaLR 5 357 -71 2022 108 3 46 chr5 84055679 84055986 -115574164 - AluSx SINE Alu -18 294 1 1637 142 105 119 chr5 84055986 84056058 -115574092 + MSTA LTR MaLR 357 428 0 421 308 73 49 chr5 84056058 84056215 -115573935 - L2 LINE L2 -526 2788 2621 1132 174 5 36 chr5 84057182 84057406 -115572744 - MLT1B LTR MaLR -173 217 1 2434 68 0 0 chr5 84057952 84058247 -115571903 + AluSg SINE Alu 1 295 -15 456 229 0 0 chr5 84059382 84059487 -115570663 - Charlie5 DNA MER1_type 0 2624 2520 1716 73 0 0 chr5 84059561 84059766 -115570384 + AluY SINE Alu 1 205 -106 1748 164 79 55 chr5 84060095 84060474 -115569676 - MLT1B LTR MaLR 0 390 3 2147 125 0 0 chr5 84060594 84060890 -115569260 + AluSq SINE Alu 2 297 -16 2607 89 16 13 chr5 84060890 84061273 -115568877 + L1PA13 LINE L1 5777 6160 -3 258 281 37 49 chr5 84061877 84061959 -115568191 - L2 LINE L2 -4 3309 3229 1570 181 17 7 chr5 84062086 84062373 -115567777 - AluJb SINE Alu -18 294 5 687 325 21 11 chr5 84062445 84062728 -115567422 + L1M3a LINE L1 1 286 -5669 23 0 0 0 chr5 84063787 84063810 -115566340 + AT_rich Low_complexity Low_complexity 1 23 0 573 136 0 0 chr5 84063902 84063983 -115566167 + FLAM_C SINE Alu 36 116 -27 234 0 0 0 chr5 84063989 84064015 -115566135 + (TTG)n Simple_repeat Simple_repeat 1 26 0 191 300 0 0 chr5 84064252 84064292 -115565858 - L2 LINE L2 -25 3288 3249 342 115 0 0 chr5 84065224 84065276 -115564874 + (TG)n Simple_repeat Simple_repeat 2 53 0 1845 166 7 0 chr5 84065276 84065559 -115564591 - AluSx SINE Alu -27 285 1 2694 194 19 47 chr5 84065798 84066371 -115563779 - MER68 LTR ERV1 0 562 6 24 32 0 0 chr5 84066535 84066566 -115563584 + AT_rich Low_complexity Low_complexity 1 31 0 4923 137 31 10 chr5 84066620 84067451 -115562699 + L1MA8 LINE L1 5416 6264 -27 1536 177 87 4 chr5 84067946 84068212 -115561938 - AluJb SINE Alu -24 288 1 326 316 133 46 chr5 84068244 84068440 -115561710 - MIR SINE MIR -48 214 2 1758 177 7 7 chr5 84068757 84069057 -115561093 + AluJb SINE Alu 7 306 -6 1452 193 114 38 chr5 84069647 84070015 -115560135 - MSTD LTR MaLR 0 396 1 334 299 43 8 chr5 84070536 84070653 -115559497 + L1MCc LINE L1 337 457 -5966 1840 281 54 16 chr5 84070884 84071824 -115558326 + L1MCc LINE L1 823 1805 -4897 * 43777 39 4 7 chr5 84071819 84077992 -115552158 + L1PA4 LINE L1 2 6155 0 25 0 0 0 chr5 84077992 84078017 -115552133 + AT_rich Low_complexity Low_complexity 1 25 0 682 249 88 47 chr5 84078017 84078359 -115551791 + L1MCc LINE L1 2003 2358 -4764 510 261 49 7 chr5 84078380 84078522 -115551628 + MLT1G LTR MaLR 443 590 0 305 369 33 33 chr5 84078536 84078780 -115551370 + L2 LINE L2 2638 2881 -433 253 261 120 11 chr5 84079581 84079673 -115550477 + L2 LINE L2 2932 3033 -239 240 375 29 19 chr5 84079687 84079791 -115550359 - L2 LINE L2 -10 3262 3158 203 263 173 38 chr5 84079911 84080044 -115550106 + L2 LINE L2 3162 3312 -1 2372 98 0 3 chr5 84080250 84080556 -115549594 + AluSg SINE Alu 1 305 -5 1709 157 60 3 chr5 84081286 84081605 -115548545 + L1MD2 LINE L1 6014 6350 -9 437 262 45 86 chr5 84081631 84081921 -115548229 - MSTD-int LTR MaLR -7 1364 1087 28 29 0 0 chr5 84082272 84082307 -115547843 + AT_rich Low_complexity Low_complexity 1 35 0 240 31 31 0 chr5 84082975 84083007 -115547143 - MSTD-int LTR MaLR -1325 46 14 801 238 207 94 chr5 84083019 84083541 -115546609 - MLT1H1 LTR MaLR 0 555 15 424 156 37 28 chr5 84084032 84084141 -115546009 - Tigger2 DNA MER2_type -187 2531 2422 453 119 10 139 chr5 84084164 84084265 -115545885 - Tigger2 DNA MER2_type -1880 838 751 239 241 0 0 chr5 84087358 84087412 -115542738 - L2 LINE L2 -3 3310 3257 239 280 86 11 chr5 84088366 84088459 -115541691 + L2 LINE L2 2611 2710 -604 2434 192 5 103 chr5 84089624 84090275 -115539875 + LTR27 LTR ERV1 48 634 -2 2359 100 0 0 chr5 84090722 84091032 -115539118 + AluSp SINE Alu 1 310 -3 23 33 0 0 chr5 84091761 84091791 -115538359 + AT_rich Low_complexity Low_complexity 1 30 0 1459 174 6 22 chr5 84091885 84092196 -115537954 + L1MA10 LINE L1 6027 6332 -2 360 197 79 8 chr5 84092417 84092544 -115537606 - L1ME4a LINE L1 -4 6117 5982 25 31 0 0 chr5 84092759 84092791 -115537359 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 84093202 84093224 -115536926 + AT_rich Low_complexity Low_complexity 1 22 0 192 179 0 0 chr5 84093462 84093501 -115536649 + (ATG)n Simple_repeat Simple_repeat 2 40 0 2673 39 0 0 chr5 84094089 84094396 -115535754 + AluY SINE Alu 1 307 -4 23 54 0 0 chr5 84095176 84095213 -115534937 + AT_rich Low_complexity Low_complexity 1 37 0 24 53 0 0 chr5 84095776 84095814 -115534336 + AT_rich Low_complexity Low_complexity 1 38 0 41828 32 23 9 chr5 84096101 84102169 -115527981 + L1HS LINE L1 3 6154 -1 458 252 15 30 chr5 84102460 84102595 -115527555 + MIR SINE MIR 13 145 -117 2694 33 0 0 chr5 84103386 84103688 -115526462 - AluY SINE Alu -7 304 3 29 60 0 0 chr5 84103794 84103844 -115526306 + AT_rich Low_complexity Low_complexity 1 50 0 25 31 0 0 chr5 84104242 84104274 -115525876 + AT_rich Low_complexity Low_complexity 1 32 0 1265 140 53 26 chr5 84104429 84104657 -115525493 - MER46A DNA MER2_type -1 235 2 193 311 49 90 chr5 84104751 84104873 -115525277 + MIR3 SINE MIR 52 168 -40 438 204 244 45 chr5 84106335 84106511 -115523639 - MIR SINE MIR -1 261 51 1654 154 33 23 chr5 84107831 84108130 -115522020 + AluJo SINE Alu 1 302 -10 2265 91 82 20 chr5 84108132 84108485 -115521665 - THE1C LTR MaLR 0 375 1 2086 122 7 0 chr5 84109050 84109338 -115520812 - AluSx SINE Alu -20 292 3 301 267 33 22 chr5 84109617 84109707 -115520443 + L2 LINE L2 2994 3084 -188 1330 83 9 48 chr5 84109746 84109975 -115520175 - L1MA9 LINE L1 -2 6310 6091 232 288 12 25 chr5 84110439 84110519 -115519631 + Charlie4 DNA MER1_type 1883 1961 0 343 298 29 88 chr5 84111593 84111865 -115518285 + L2 LINE L2 1177 1432 -1882 214 315 134 39 chr5 84111873 84112000 -115518150 - MIR3 SINE MIR -34 174 36 655 311 129 45 chr5 84112608 84113162 -115516988 + L2 LINE L2 1482 1988 -1326 2270 101 10 3 chr5 84113162 84113469 -115516681 - AluSx SINE Alu -3 309 1 655 311 129 45 chr5 84113469 84113596 -115516554 + L2 LINE L2 1988 2103 -1211 790 181 0 0 chr5 84113596 84113723 -115516427 - FLAM_A SINE Alu -6 127 1 655 311 129 45 chr5 84113723 84113894 -115516256 + L2 LINE L2 2103 2407 -907 228 237 105 70 chr5 84113912 84114026 -115516124 + L2 LINE L2 2577 2694 -620 2762 155 64 39 chr5 84114038 84114599 -115515551 + MER4B LTR ERV1 1 575 -35 710 352 66 40 chr5 84114719 84115142 -115515008 + L2 LINE L2 2836 3269 -3 2356 59 0 3 chr5 84115634 84115924 -115514226 - AluY SINE Alu -9 302 14 1474 199 33 13 chr5 84116061 84116362 -115513788 + MLT1A2 LTR MaLR 57 363 -11 1021 262 238 18 chr5 84116896 84117446 -115512704 + LTR50 LTR ERVL 1 671 -124 775 253 0 6 chr5 84117605 84117783 -115512367 + MIR SINE MIR 49 225 -37 4572 26 0 0 chr5 84117784 84118316 -115511834 + L1PA3 LINE L1 5620 6151 -4 307 94 31 16 chr5 84118330 84118394 -115511756 + L1M LINE L1 5259 5323 -989 29 0 0 0 chr5 84118394 84118423 -115511727 + AT_rich Low_complexity Low_complexity 1 29 0 964 91 23 0 chr5 84118450 84118582 -115511568 + AluSc SINE Alu 163 297 -12 499 265 21 80 chr5 84119433 84119671 -115510479 - L2 LINE L2 -49 3264 3041 2025 98 36 4 chr5 84120114 84120417 -115509733 + AluSx SINE Alu 1 312 0 282 289 16 23 chr5 84121747 84121875 -115508275 + L1ME LINE L1 5698 5824 -297 599 267 52 28 chr5 84122657 84122945 -115507205 + L1MC4a LINE L1 5665 5959 -1849 632 239 128 27 chr5 84123010 84123198 -115506952 + LTR50 LTR ERVL 1 207 -588 2319 100 3 0 chr5 84123642 84123951 -115506199 - AluSx SINE Alu -2 310 1 771 226 77 5 chr5 84124043 84124238 -115505912 - MER3 DNA MER1_type 0 209 1 527 261 208 0 chr5 84125080 84125287 -115504863 - MIR SINE MIR -11 251 2 225 0 0 0 chr5 84126736 84126761 -115503389 + (T)n Simple_repeat Simple_repeat 1 25 0 538 63 13 0 chr5 84128746 84128825 -115501325 - L1MA3 LINE L1 0 6305 6226 988 167 100 12 chr5 84128859 84129110 -115501040 - MER33 DNA MER1_type -51 273 1 638 277 32 29 chr5 84129132 84129350 -115500800 + MIR SINE MIR 32 248 -14 2490 139 21 5 chr5 84129416 84129839 -115500311 + L1PA16 LINE L1 5737 6166 0 1324 104 5 0 chr5 84132802 84132994 -115497156 - L1PB1 LINE L1 0 6151 5959 * 6904 60 63 0 chr5 84132990 84133904 -115496246 - L1PA7 LINE L1 0 6154 5235 1579 139 106 7 chr5 84134033 84134307 -115495843 - AluJo SINE Alu -6 306 6 214 299 78 0 chr5 84134420 84134497 -115495653 + MIR SINE MIR 106 188 -74 1315 174 20 76 chr5 84134899 84135203 -115494947 + AluJo SINE Alu 1 287 -25 22 0 0 0 chr5 84136052 84136074 -115494076 + AT_rich Low_complexity Low_complexity 1 22 0 2248 88 0 20 chr5 84136102 84136397 -115493753 - AluSc SINE Alu -20 289 1 22 0 0 0 chr5 84136399 84136421 -115493729 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 84136453 84136475 -115493675 + AT_rich Low_complexity Low_complexity 1 22 0 410 91 0 15 chr5 84136533 84136599 -115493551 - L1PB1 LINE L1 -15 6136 6072 1705 117 27 90 chr5 84137944 84138345 -115491805 - L1MA8 LINE L1 0 6291 5916 321 179 0 0 chr5 84138345 84138401 -115491749 - MER2 DNA MER2_type -8 337 282 1044 184 15 15 chr5 84138405 84138611 -115491539 + MER2 DNA MER2_type 5 210 -135 3879 136 30 24 chr5 84138687 84138786 -115491364 - L1MA8 LINE L1 -366 5925 5828 11118 95 14 0 chr5 84138786 84141220 -115488930 + L1PA8 LINE L1 3709 6159 -13 3879 136 30 24 chr5 84141220 84142109 -115488041 - L1MA8 LINE L1 -463 5828 4930 2289 103 0 3 chr5 84142231 84142533 -115487617 + AluSq SINE Alu 1 301 -12 2193 126 0 0 chr5 84142569 84142878 -115487272 + AluSg1 SINE Alu 1 309 0 2241 98 0 22 chr5 84144159 84144474 -115485676 - AluSx SINE Alu 0 312 5 220 239 211 0 chr5 84144480 84144551 -115485599 + L2 LINE L2 3228 3313 0 2242 168 17 2 chr5 84144899 84145311 -115484839 - L1P LINE L1 -1277 4869 4452 2079 104 0 42 chr5 84145546 84145853 -115484297 - AluSx SINE Alu -18 294 1 29 70 0 0 chr5 84146629 84146686 -115483464 + AT_rich Low_complexity Low_complexity 1 57 0 730 293 61 11 chr5 84147045 84147325 -115482825 + L1MEc LINE L1 73 366 -6030 396 0 0 0 chr5 84147335 84147379 -115482771 + (CA)n Simple_repeat Simple_repeat 2 45 0 225 0 0 0 chr5 84148295 84148320 -115481830 + (A)n Simple_repeat Simple_repeat 1 25 0 23 33 0 0 chr5 84148332 84148362 -115481788 + AT_rich Low_complexity Low_complexity 1 30 0 25 31 0 0 chr5 84148748 84148780 -115481370 + AT_rich Low_complexity Low_complexity 1 32 0 292 258 93 60 chr5 84148965 84149147 -115481003 + L1MC1 LINE L1 5598 5785 -336 2661 194 52 32 chr5 84149223 84149853 -115480297 + L1PA8A LINE L1 5488 6130 -1 2871 158 28 2 chr5 84149877 84150384 -115479766 + L1MC1 LINE L1 5814 6333 0 2268 111 0 7 chr5 84152611 84152917 -115477233 - AluSq SINE Alu -9 304 1 1535 107 4 22 chr5 84152957 84153182 -115476968 - AluSq SINE Alu -90 223 3 1039 287 237 48 chr5 84153334 84154090 -115476060 + L3 LINE CR1 679 1577 0 759 316 114 28 chr5 84155229 84155694 -115474456 + MLT1J LTR MaLR 5 509 -2 263 297 276 10 chr5 84156060 84156252 -115473898 + L2 LINE L2 2269 2511 -803 233 212 30 0 chr5 84156909 84156975 -115473175 + GA-rich Low_complexity Low_complexity 2 69 0 8294 163 56 12 chr5 84157244 84157439 -115472711 + L1MC1 LINE L1 20 205 -6221 207 0 0 0 chr5 84157439 84157462 -115472688 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8294 163 56 12 chr5 84157462 84159047 -115471103 + L1MC1 LINE L1 205 1996 -4430 2083 139 3 0 chr5 84159047 84159349 -115470801 - AluSx SINE Alu -7 305 3 8294 163 56 12 chr5 84159349 84159798 -115470352 + L1MC1 LINE L1 1996 2424 -4002 1823 233 25 54 chr5 84159798 84160346 -115469804 + MLT2B3 LTR ERVL 1 480 -35 41 36 0 0 chr5 84160346 84160401 -115469749 + AT_rich Low_complexity Low_complexity 1 55 0 255 129 16 81 chr5 84160401 84160463 -115469687 + MLT2B3 LTR ERVL 462 519 -1 9200 211 49 10 chr5 84160463 84161279 -115468871 + L1MC1 LINE L1 2419 3201 -3412 2123 135 0 0 chr5 84161279 84161582 -115468568 + AluSx SINE Alu 1 303 -9 9200 211 49 10 chr5 84161582 84164545 -115465605 + L1MC1 LINE L1 3201 6333 -280 2469 133 7 31 chr5 84164545 84164958 -115465192 + MSTA-int LTR MaLR 1249 1651 0 1824 120 191 22 chr5 84164958 84165324 -115464826 + MSTA LTR MaLR 1 428 0 1004 184 88 40 chr5 84165324 84165596 -115464554 + L1MC1 LINE L1 6329 6613 0 2361 113 0 0 chr5 84166616 84166948 -115463202 + AluSg SINE Alu 1 332 0 21562 181 72 9 chr5 84166959 84172954 -115457196 + L1MA3 LINE L1 15 6570 -1154 2211 114 3 3 chr5 84172954 84173262 -115456888 + AluSc SINE Alu 1 308 -1 21562 181 72 9 chr5 84173262 84174495 -115455655 + L1MA3 LINE L1 6570 7724 0 1342 185 24 100 chr5 84174722 84175051 -115455099 + AluJo SINE Alu 1 304 -8 2122 50 0 0 chr5 84175383 84175645 -115454505 - L1PA5 LINE L1 -4 6150 5889 272 330 78 10 chr5 84176851 84176954 -115453196 + L2 LINE L2 3154 3263 -9 22 0 0 0 chr5 84177124 84177146 -115453004 + AT_rich Low_complexity Low_complexity 1 22 0 2161 117 14 0 chr5 84178559 84178850 -115451300 + AluSx SINE Alu 1 295 -17 198 175 0 75 chr5 84178953 84178968 -115451182 - L2 LINE L2 -20 3252 3237 14061 130 43 9 chr5 84178968 84179881 -115450269 - Tigger1 DNA MER2_type 0 2418 1537 1538 171 55 17 chr5 84179881 84180174 -115449976 - AluJb SINE Alu -8 304 1 14061 130 43 9 chr5 84180174 84181599 -115448551 - Tigger1 DNA MER2_type -881 1537 1 198 175 0 75 chr5 84181599 84181623 -115448527 - L2 LINE L2 -35 3237 3216 341 279 101 0 chr5 84181784 84181913 -115448237 + MER103 DNA DNA 24 165 -1 22 0 0 0 chr5 84182092 84182114 -115448036 + AT_rich Low_complexity Low_complexity 1 22 0 2065 91 4 4 chr5 84182119 84182393 -115447757 + AluSc SINE Alu 1 274 -35 252 0 0 0 chr5 84182398 84182426 -115447724 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 24 67 0 0 chr5 84183215 84183260 -115446890 + AT_rich Low_complexity Low_complexity 1 45 0 233 394 0 16 chr5 84183363 84183490 -115446660 + 7SLRNA srpRNA srpRNA 54 178 -142 852 20 0 0 chr5 84183499 84183598 -115446552 + L1PA3 LINE L1 6054 6152 -3 262 263 0 0 chr5 84184434 84184491 -115445659 - MER4-int LTR ERV1 -5430 1168 1112 2262 109 3 0 chr5 84184546 84184850 -115445300 + AluSg SINE Alu 1 305 -5 325 318 45 0 chr5 84184854 84185008 -115445142 + MER103 DNA DNA 3 163 -3 4140 129 32 5 chr5 84185851 84186515 -115443635 + L1PA16 LINE L1 5472 6153 -13 184 253 84 48 chr5 84186532 84186615 -115443535 + L2 LINE L2 640 725 -2589 2079 160 93 38 chr5 84187249 84187692 -115442458 + MLT1C LTR MaLR 1 467 0 192 228 203 39 chr5 84187746 84187896 -115442254 + MIR SINE MIR 28 222 -40 249 337 76 0 chr5 84188185 84188277 -115441873 - L2 LINE L2 -36 3236 3138 23 0 0 0 chr5 84189930 84189953 -115440197 + AT_rich Low_complexity Low_complexity 1 23 0 815 269 9 28 chr5 84191783 84191995 -115438155 + MIR SINE MIR 7 214 -48 1736 257 100 97 chr5 84192391 84192477 -115437673 + HAL1 LINE L1 1 85 -2422 1930 140 29 13 chr5 84192477 84192784 -115437366 - AluJb SINE Alu 0 312 1 1736 257 100 97 chr5 84192784 84193518 -115436632 + HAL1 LINE L1 85 815 -1692 201 74 0 0 chr5 84193518 84193545 -115436605 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1736 257 100 97 chr5 84193545 84193666 -115436484 + HAL1 LINE L1 815 934 -1573 6959 51 35 0 chr5 84193666 84194607 -115435543 - L1PA7 LINE L1 -2 6152 5198 1736 257 100 97 chr5 84194607 84195018 -115435132 + HAL1 LINE L1 934 1359 -1148 * 1769 246 91 60 chr5 84195013 84195529 -115434621 + HAL1 LINE L1 1685 2235 -272 1937 153 3 10 chr5 84195529 84195843 -115434307 + AluJo SINE Alu 1 312 0 1769 246 91 60 chr5 84195843 84196119 -115434031 + HAL1 LINE L1 2235 2501 -6 22 35 0 0 chr5 84196135 84196164 -115433986 + AT_rich Low_complexity Low_complexity 1 29 0 1721 226 60 29 chr5 84196837 84197283 -115432867 + LTR40c LTR ERVL 1 460 -5 2477 200 21 27 chr5 84199323 84199883 -115430267 - MER74A LTR ERVL -1 557 1 261 0 0 0 chr5 84201357 84201386 -115428764 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 219 259 0 0 chr5 84201806 84201860 -115428290 - L2 LINE L2 -3 3269 3216 337 352 55 0 chr5 84202373 84202518 -115427632 + MIR SINE MIR 77 229 -33 21 57 0 0 chr5 84203863 84203898 -115426252 + AT_rich Low_complexity Low_complexity 1 35 0 445 311 53 1 chr5 84203898 84204119 -115426031 - L1M4 LINE L1 -1488 4658 4427 251 247 0 0 chr5 84204367 84204444 -115425706 + L1ME3 LINE L1 4959 5035 -1111 565 231 367 14 chr5 84204715 84205001 -115425149 - L2 LINE L2 -1 3312 2926 508 310 94 48 chr5 84205010 84205450 -115424700 + L1ME3 LINE L1 5374 5838 -324 332 166 33 171 chr5 84205510 84205691 -115424459 + L1MC5 LINE L1 7756 7911 -50 27 0 0 0 chr5 84205750 84205777 -115424373 + AT_rich Low_complexity Low_complexity 1 27 0 196 306 88 27 chr5 84206128 84206275 -115423875 - MIR3 SINE MIR -49 159 4 502 294 43 20 chr5 84206828 84207008 -115423142 + MIR SINE MIR 3 187 -66 2336 89 3 0 chr5 84207026 84207319 -115422831 + AluSp SINE Alu 1 294 -19 407 307 264 5 chr5 84207479 84207933 -115422217 - L2 LINE L2 0 3313 2747 345 336 40 13 chr5 84208210 84208391 -115421759 + MIR SINE MIR 17 197 -65 888 126 69 0 chr5 84208715 84208890 -115421260 + L1MA7 LINE L1 6102 6288 -3 198 103 0 0 chr5 84209248 84209277 -115420873 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr5 84209484 84209505 -115420645 + AT_rich Low_complexity Low_complexity 1 21 0 268 167 50 0 chr5 84209505 84209565 -115420585 - L1MA7 LINE L1 -3 6288 6226 200 246 0 43 chr5 84209621 84209690 -115420460 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 2233 103 0 0 chr5 84209991 84210281 -115419869 - AluSx SINE Alu -20 292 3 912 92 8 0 chr5 84210682 84210824 -115419326 - L1MB2 LINE L1 -28 6143 6015 264 286 107 9 chr5 84210839 84210951 -115419199 + MIR SINE MIR 49 171 -91 42 48 0 0 chr5 84211564 84211627 -115418523 + AT_rich Low_complexity Low_complexity 1 63 0 2516 68 0 0 chr5 84214448 84214757 -115415393 + AluY SINE Alu 1 309 -2 40 31 0 15 chr5 84215069 84215100 -115415050 + AT_rich Low_complexity Low_complexity 1 31 -33 1934 136 29 35 chr5 84215100 84215446 -115414704 + MER2 DNA MER2_type 1 344 0 40 31 0 15 chr5 84215446 84215479 -115414671 + AT_rich Low_complexity Low_complexity 31 64 0 360 0 0 0 chr5 84215899 84215939 -115414211 + (CA)n Simple_repeat Simple_repeat 2 41 0 280 221 0 29 chr5 84216058 84216126 -115414024 + L2 LINE L2 3207 3272 0 2492 61 0 16 chr5 84217246 84217556 -115412594 + AluY SINE Alu 1 305 -6 857 171 156 15 chr5 84217864 84218063 -115412087 + L1ME3A LINE L1 5933 6159 -11 241 301 145 0 chr5 84218091 84218174 -115411976 + MIR SINE MIR 37 131 -131 345 313 202 23 chr5 84218185 84218616 -115411534 + L2 LINE L2 2232 2739 -575 2381 106 3 0 chr5 84218628 84218939 -115411211 + AluSx SINE Alu 1 312 0 282 355 82 89 chr5 84218992 84219406 -115410744 + L2 LINE L2 2860 3270 -2 537 265 99 0 chr5 84220789 84220951 -115409199 + MIR SINE MIR 10 187 -75 1796 151 3 0 chr5 84220963 84221261 -115408889 + L1MB3 LINE L1 5884 6182 -1 215 337 33 22 chr5 84221709 84221801 -115408349 + MIR SINE MIR 2 94 -168 438 278 57 42 chr5 84222189 84222337 -115407813 - L2 LINE L2 0 3313 3160 2145 109 0 14 chr5 84222337 84222630 -115407520 + AluSx SINE Alu 1 289 -23 438 278 57 42 chr5 84222630 84222693 -115407457 - L2 LINE L2 -153 3160 3099 452 291 118 26 chr5 84223039 84223310 -115406840 + L2 LINE L2 2956 3251 -62 567 296 126 20 chr5 84223362 84223767 -115406383 + MLT1L LTR MaLR 153 600 -15 199 237 93 31 chr5 84223780 84223877 -115406273 + MIR SINE MIR 117 219 -43 22 56 0 0 chr5 84224639 84224675 -115405475 + AT_rich Low_complexity Low_complexity 1 36 0 586 342 13 8 chr5 84227017 84227254 -115402896 + MIR SINE MIR 25 262 0 272 305 81 29 chr5 84227397 84227571 -115402579 - L2 LINE L2 -12 3301 3119 180 203 108 40 chr5 84228561 84228635 -115401515 - MIR3 SINE MIR -9 199 121 204 40 0 0 chr5 84229038 84229063 -115401087 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 496 291 117 91 chr5 84229501 84229972 -115400178 + L1M2 LINE L1 441 898 -5951 249 57 0 0 chr5 84229972 84230007 -115400143 + (CCCCAG)n Simple_repeat Simple_repeat 6 40 0 496 291 117 91 chr5 84230007 84230622 -115399528 + L1M2 LINE L1 898 1406 -5443 298 194 11 11 chr5 84231016 84231109 -115399041 + CT-rich Low_complexity Low_complexity 2 94 0 324 304 130 80 chr5 84231272 84231819 -115398331 + L1M2 LINE L1 338 911 -5938 310 247 34 34 chr5 84233327 84233416 -115396734 + MER5B DNA MER1_type 80 168 -10 22 0 0 0 chr5 84233796 84233818 -115396332 + AT_rich Low_complexity Low_complexity 1 22 0 25 65 0 0 chr5 84234862 84234908 -115395242 + AT_rich Low_complexity Low_complexity 1 46 0 267 194 47 31 chr5 84237428 84237557 -115392593 + (TA)n Simple_repeat Simple_repeat 2 132 0 358 173 16 1 chr5 84237595 84237838 -115392312 + AluJo SINE Alu 1 279 -23 346 154 26 0 chr5 84237839 84237917 -115392233 + GA-rich Low_complexity Low_complexity 1 80 0 255 186 68 0 chr5 84237917 84237976 -115392174 - MER116 DNA Mariner -14 66 4 268 250 107 0 chr5 84238032 84238116 -115392034 - MIR SINE MIR -6 256 164 1645 181 26 20 chr5 84238116 84238419 -115391731 + AluJb SINE Alu 1 305 -7 2171 114 14 0 chr5 84238909 84239199 -115390951 + AluSc SINE Alu 1 294 -15 743 293 75 57 chr5 84240470 84240856 -115389294 + L2 LINE L2 2921 3313 0 230 203 51 25 chr5 84241208 84241287 -115388863 + L2 LINE L2 2677 2757 -557 211 318 0 0 chr5 84241376 84241420 -115388730 + L2 LINE L2 3132 3175 -97 732 268 78 5 chr5 84241596 84241801 -115388349 + MIR SINE MIR 33 252 -10 291 139 0 0 chr5 84241963 84242006 -115388144 - 5S rRNA rRNA -78 43 1 321 281 276 10 chr5 84242317 84242509 -115387641 - L3b LINE CR1 -140 1443 1201 233 235 39 0 chr5 84242754 84242805 -115387345 - L2 LINE L2 -2 3270 3218 555 308 115 67 chr5 84242887 84243567 -115386583 - L2 LINE L2 -13 3259 2550 229 224 12 35 chr5 84243899 84243984 -115386166 + A-rich Low_complexity Low_complexity 2 84 0 605 314 81 9 chr5 84244103 84244425 -115385725 - LTR16A LTR ERVL -7 443 99 2525 59 3 0 chr5 84245109 84245415 -115384735 - AluY SINE Alu -4 307 1 23 54 0 0 chr5 84246263 84246300 -115383850 + AT_rich Low_complexity Low_complexity 1 37 0 497 296 51 103 chr5 84246476 84246807 -115383343 - LTR67 LTR ERVL -227 330 17 1968 155 0 0 chr5 84248361 84248689 -115381461 - AluJb SINE Alu 0 328 1 1942 126 0 21 chr5 84249568 84249853 -115380297 + AluSx SINE Alu 1 279 -33 26 0 0 0 chr5 84249983 84250009 -115380141 + AT_rich Low_complexity Low_complexity 1 26 0 415 321 36 14 chr5 84250022 84250162 -115379988 - MIR3 SINE MIR -63 145 3 456 274 6 6 chr5 84250425 84250589 -115379561 - MER103 DNA DNA 0 166 3 358 233 121 35 chr5 84251233 84251349 -115378801 + MER94 DNA DNA 6 131 -3 251 278 123 112 chr5 84251534 84251991 -115378159 - L2 LINE L2 -7 3265 2804 1136 171 65 154 chr5 84252240 84252791 -115377359 - MLT1D LTR MaLR -1 504 3 447 311 26 26 chr5 84253495 84253646 -115376504 + MIR3 SINE MIR 33 183 -25 491 271 50 44 chr5 84255360 84255541 -115374609 - MIR SINE MIR -12 250 69 200 29 0 59 chr5 84255786 84255820 -115374330 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 309 333 116 26 chr5 84256600 84256789 -115373361 - MIR SINE MIR -56 206 1 585 298 75 16 chr5 84257823 84258011 -115372139 + MIR SINE MIR 56 254 -8 2252 119 3 0 chr5 84259981 84260293 -115369857 + AluSq SINE Alu 1 313 0 338 250 38 45 chr5 84260567 84260699 -115369451 + L1ME4a LINE L1 5934 6064 -57 919 227 25 11 chr5 84260740 84261026 -115369124 + L1M4 LINE L1 4359 4648 -1498 7155 123 23 29 chr5 84261029 84261437 -115368713 - Tigger3b DNA MER2_type -1797 1231 822 2473 76 0 3 chr5 84261437 84261740 -115368410 - AluSx SINE Alu -10 302 1 7155 123 23 29 chr5 84261740 84261949 -115368201 - Tigger3b DNA MER2_type -2206 822 613 1714 147 0 74 chr5 84261949 84262261 -115367889 + AluSx SINE Alu 1 289 -23 7155 123 23 29 chr5 84262261 84262881 -115367269 - Tigger3b DNA MER2_type -2415 613 1 253 274 55 16 chr5 84264556 84264664 -115365486 + MIR SINE MIR 38 149 -62 657 250 114 26 chr5 84265590 84265818 -115364332 + MIR SINE MIR 8 255 -7 2369 166 11 3 chr5 84265981 84266343 -115363807 - MLT1A1 LTR MaLR 0 365 1 210 192 19 19 chr5 84268062 84268114 -115362036 + CT-rich Low_complexity Low_complexity 4 55 0 2321 106 0 0 chr5 84268559 84268870 -115361280 - AluY SINE Alu 0 311 1 228 330 10 40 chr5 84268929 84269029 -115361121 - MIR SINE MIR -73 135 39 2307 110 7 0 chr5 84269328 84269638 -115360512 + AluSx SINE Alu 1 312 0 2369 76 0 0 chr5 84269646 84269934 -115360216 + AluSc SINE Alu 1 288 -21 181 293 86 0 chr5 84271056 84271114 -115359036 + L2 LINE L2 3251 3313 0 1419 63 0 0 chr5 84271760 84271934 -115358216 + AluY SINE Alu 136 309 -2 189 256 0 0 chr5 84272021 84272060 -115358090 - MIR SINE MIR -176 86 48 560 308 68 25 chr5 84272482 84272725 -115357425 + MIR SINE MIR 8 259 -3 21 0 0 0 chr5 84273020 84273041 -115357109 + AT_rich Low_complexity Low_complexity 1 21 0 551 284 92 67 chr5 84273429 84274017 -115356133 + L2 LINE L2 2682 3272 0 2157 95 0 16 chr5 84276855 84277159 -115352991 - AluSx SINE Alu -13 299 1 239 182 11 0 chr5 84277629 84277678 -115352472 - MIR SINE MIR -46 162 111 264 59 0 0 chr5 84278292 84278326 -115351824 + (TG)n Simple_repeat Simple_repeat 1 34 0 423 0 0 0 chr5 84278346 84278393 -115351757 + (CA)n Simple_repeat Simple_repeat 1 47 0 189 336 42 49 chr5 84278471 84278614 -115351536 - L2 LINE L2 -450 2864 2723 214 347 69 0 chr5 84278674 84278746 -115351404 + L2 LINE L2 3186 3262 -10 231 88 0 0 chr5 84278750 84278784 -115351366 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 567 336 47 0 chr5 84279053 84279267 -115350883 - L2 LINE L2 -232 3081 2858 325 298 87 33 chr5 84280337 84280579 -115349571 - MER112 DNA MER1_type -5 255 1 200 260 40 0 chr5 84280908 84280958 -115349192 + MIR3 SINE MIR 108 159 -49 1975 160 0 6 chr5 84281462 84281775 -115348375 - AluSx SINE Alu -1 311 1 244 191 9 45 chr5 84281893 84282003 -115348147 + (TAAA)n Simple_repeat Simple_repeat 4 109 0 1838 204 25 27 chr5 84282269 84282301 -115347849 - MLT2D LTR ERVL -8 406 375 360 119 0 0 chr5 84282301 84282360 -115347790 + (TG)n Simple_repeat Simple_repeat 1 59 0 1838 204 25 27 chr5 84282360 84282734 -115347416 - MLT2D LTR ERVL -39 375 1 6143 232 33 13 chr5 84282746 84284554 -115345596 + L1M2c LINE L1 71 1748 -5101 395 148 0 34 chr5 84284586 84284674 -115345476 - L1M2c LINE L1 -5010 1779 1695 2744 214 31 28 chr5 84284676 84285480 -115344670 + L1M2c LINE L1 2627 3440 -3408 331 276 0 0 chr5 84285889 84285965 -115344185 + MIR SINE MIR 76 151 -111 4948 112 14 21 chr5 84286041 84286806 -115343344 + L1MA5A LINE L1 5538 6297 0 2058 116 0 10 chr5 84286969 84287261 -115342889 + AluSx SINE Alu 5 293 -19 1182 179 64 103 chr5 84287363 84287404 -115342746 - Charlie1 DNA MER1_type 0 2761 2720 2369 77 20 0 chr5 84287404 84287701 -115342449 - AluY SINE Alu -8 303 1 1182 179 64 103 chr5 84287701 84287839 -115342311 - Charlie1 DNA MER1_type -41 2720 2578 240 35 0 0 chr5 84287839 84287868 -115342282 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 1746 135 62 0 chr5 84287872 84288131 -115342019 - AluSx SINE Alu -37 275 1 1182 179 64 103 chr5 84288131 84288381 -115341769 - Charlie1 DNA MER1_type -186 2575 2343 184 87 0 0 chr5 84288398 84288421 -115341729 - MER5A DNA MER1_type -166 23 1 335 291 35 3 chr5 84288441 84288558 -115341592 + MIR SINE MIR 32 133 -75 267 250 135 19 chr5 84288552 84288656 -115341494 - MIR SINE MIR -3 259 144 * 2425 93 0 0 chr5 84288770 84289080 -115341070 - AluSx SINE Alu -2 310 1 608 234 78 0 chr5 84289542 84289670 -115340480 + MER63A DNA MER1_type 48 185 -25 277 207 85 24 chr5 84289781 84289863 -115340287 + MIR SINE MIR 175 261 -1 225 132 26 0 chr5 84290147 84290185 -115339965 + L1ME LINE L1 5615 5653 -468 367 237 18 9 chr5 84290204 84290318 -115339832 + L1ME LINE L1 5705 5819 -302 231 230 40 27 chr5 84290974 84291048 -115339102 + (TATATG)n Simple_repeat Simple_repeat 6 80 0 465 297 109 16 chr5 84291363 84291555 -115338595 + MIR SINE MIR 53 262 0 2914 195 22 2 chr5 84294490 84295023 -115335127 + L1MDa LINE L1 18 561 -5979 553 178 16 70 chr5 84295038 84295084 -115335066 + L1MD1 LINE L1 6121 6168 -74 2182 110 3 0 chr5 84295084 84295376 -115334774 + AluSq SINE Alu 1 293 -20 553 178 16 70 chr5 84295376 84295458 -115334692 + L1MD1 LINE L1 6168 6242 0 747 227 161 91 chr5 84295561 84295996 -115334154 - MLT1D LTR MaLR -2 465 1 944 275 90 53 chr5 84296101 84296345 -115333805 - L2 LINE L2 -7 3306 3073 1759 161 3 10 chr5 84296345 84296637 -115333513 - AluJo SINE Alu -19 293 4 944 275 90 53 chr5 84296637 84296847 -115333303 - L2 LINE L2 -240 3073 2835 1616 153 233 20 chr5 84297136 84297488 -115332662 + MSTA LTR MaLR 2 428 0 619 304 95 25 chr5 84297621 84297989 -115332161 - L1MC/D LINE L1 -2159 5649 5256 581 251 111 66 chr5 84298036 84298429 -115331721 - LTR67 LTR ERVL -11 546 105 554 232 27 9 chr5 84299855 84299992 -115330158 + MIR SINE MIR 6 149 -63 1172 111 0 0 chr5 84299995 84300148 -115330002 + AluJb SINE Alu 22 174 -138 2873 91 3 0 chr5 84300148 84300531 -115329619 - pTR5 LTR ERV1 -2047 391 8 602 167 0 65 chr5 84300541 84300709 -115329441 - pTR5 LTR ERV1 -1450 988 832 1007 122 0 0 chr5 84300721 84300852 -115329298 + AluJb SINE Alu 169 299 -13 659 132 0 0 chr5 84300891 84300982 -115329168 - AluSc SINE Alu -15 294 204 4411 138 44 24 chr5 84300982 84301929 -115328221 + pTR5 LTR ERV1 743 2025 -413 278 286 10 0 chr5 84301929 84302027 -115328123 + LTR30 LTR ERV1 544 642 -80 1503 104 5 5 chr5 84302030 84302251 -115327899 + pTR5 LTR ERV1 172 392 -2046 567 139 35 0 chr5 84302251 84302337 -115327813 - AluSp SINE Alu -104 209 121 821 143 15 15 chr5 84302338 84302471 -115327679 - AluJo/FLAM SINE Alu -169 133 1 242 192 0 0 chr5 84302471 84302523 -115327627 + MIR SINE MIR 168 219 -43 1619 117 0 0 chr5 84303142 84303365 -115326785 + L1PA14 LINE L1 5939 6161 0 613 280 71 0 chr5 84303484 84303652 -115326498 - MIR SINE MIR -65 197 18 198 0 0 0 chr5 84304515 84304537 -115325613 + (A)n Simple_repeat Simple_repeat 1 22 0 1936 97 40 37 chr5 84304542 84304840 -115325310 + AluSx SINE Alu 1 299 -13 2407 136 86 5 chr5 84305460 84305857 -115324293 + MSTB1 LTR MaLR 3 431 -1 287 59 0 0 chr5 84305890 84305924 -115324226 + U2 snRNA snRNA 1 34 -154 3832 145 12 44 chr5 84306134 84306481 -115323669 + L1MB1 LINE L1 5515 5831 -337 2126 203 59 65 chr5 84306481 84307038 -115323112 + MLT2B3 LTR ERVL 1 554 0 3832 145 12 44 chr5 84307038 84307365 -115322785 + L1MB1 LINE L1 5831 6167 -1 1167 284 40 28 chr5 84307453 84307875 -115322275 - LTR16A LTR ERVL -6 444 18 1120 174 35 63 chr5 84308329 84308719 -115321431 - MLT2B1 LTR ERVL -35 485 19 825 203 62 17 chr5 84309002 84309179 -115320971 - MER5A DNA MER1_type 0 189 5 228 200 40 0 chr5 84309496 84309546 -115320604 + MLT1K LTR MaLR 69 120 -468 354 159 16 0 chr5 84309979 84310042 -115320108 + MLT1K LTR MaLR 523 586 -2 226 220 46 101 chr5 84310906 84311015 -115319135 + MIR SINE MIR 30 132 -76 296 162 0 15 chr5 84311421 84311489 -115318661 + GA-rich Low_complexity Low_complexity 2 68 0 833 220 55 25 chr5 84314317 84314553 -115315597 - MIR SINE MIR -1 261 19 824 192 23 17 chr5 84314555 84314727 -115315423 - MER5B DNA MER1_type -3 175 3 2683 214 36 9 chr5 84314850 84315402 -115314748 + MLT1F1 LTR MaLR 1 567 0 345 259 115 36 chr5 84315925 84316064 -115314086 + MIR SINE MIR 4 153 -109 810 279 76 22 chr5 84316521 84316836 -115313314 + MER102b DNA MER1_type 2 333 -8 2756 142 16 4 chr5 84317303 84317754 -115312396 - L1MB3 LINE L1 -3 6180 5725 945 152 5 27 chr5 84317782 84317966 -115312184 - L1MB3 LINE L1 -437 5746 5567 291 230 0 27 chr5 84317970 84318044 -115312106 - L1ME2 LINE L1 -20 6144 6073 666 321 89 14 chr5 84318501 84318850 -115311300 + L1ME4a LINE L1 5417 5791 -2017 319 310 54 49 chr5 84319767 84319951 -115310199 + L1ME4a LINE L1 5840 6024 -97 1133 211 92 35 chr5 84320019 84320279 -115309871 + AluJo SINE Alu 1 275 -37 222 270 0 0 chr5 84320334 84320408 -115309742 + GA-rich Low_complexity Low_complexity 4 77 0 219 325 44 70 chr5 84320572 84320686 -115309464 - L2 LINE L2 -13 3259 3149 352 252 160 46 chr5 84321014 84321145 -115309005 - MIR SINE MIR -99 163 18 1508 138 243 25 chr5 84321667 84321992 -115308158 + MSTD LTR MaLR 1 396 0 270 0 0 0 chr5 84327782 84327812 -115302338 + (T)n Simple_repeat Simple_repeat 1 30 0 204 324 0 35 chr5 84327870 84328012 -115302138 + G-rich Low_complexity Low_complexity 3 139 0 384 22 0 0 chr5 84329221 84329266 -115300884 + (CA)n Simple_repeat Simple_repeat 1 45 0 201 129 0 0 chr5 84331160 84331191 -115298959 + (TG)n Simple_repeat Simple_repeat 2 32 0 374 264 7 79 chr5 84334038 84334178 -115295972 + MER5A DNA MER1_type 58 187 -2 395 255 61 0 chr5 84334448 84334546 -115295604 - MIR SINE MIR -114 148 45 196 230 0 6 chr5 84334572 84334613 -115295537 + L2 LINE L2 3218 3299 -14 2395 100 0 0 chr5 84334712 84335013 -115295137 - AluSx SINE Alu -11 301 1 521 301 77 65 chr5 84335420 84335756 -115294394 + L2 LINE L2 2932 3271 -1 1078 47 78 0 chr5 84335797 84335926 -115294224 - MER85 DNA T2_type 0 139 1 448 334 51 68 chr5 84336597 84336850 -115293300 + L2 LINE L2 2909 3153 -119 2162 95 7 7 chr5 84336850 84337145 -115293005 - AluSc SINE Alu -14 295 1 448 334 51 68 chr5 84337145 84337259 -115292891 + L2 LINE L2 3153 3267 -5 305 277 48 0 chr5 84337391 84337474 -115292676 - L2 LINE L2 -18 3254 3168 388 287 60 42 chr5 84337565 84337732 -115292418 - MIR SINE MIR -16 246 77 253 354 67 11 chr5 84337824 84338002 -115292148 + L2 LINE L2 827 1014 -2300 280 242 15 0 chr5 84338115 84338181 -115291969 + MIR SINE MIR 162 228 -34 738 253 86 83 chr5 84338525 84338633 -115291517 + MLT1K LTR MaLR 185 291 -297 2442 86 0 0 chr5 84338633 84338937 -115291213 + AluSq SINE Alu 1 304 -9 738 253 86 83 chr5 84338937 84339176 -115290974 + MLT1K LTR MaLR 291 533 -55 425 323 167 34 chr5 84339434 84340075 -115290075 + L2 LINE L2 1759 2484 -830 360 254 113 73 chr5 84340122 84340299 -115289851 + MLT1L LTR MaLR 1 184 -431 405 0 0 0 chr5 84340641 84340686 -115289464 + (CA)n Simple_repeat Simple_repeat 2 46 0 1584 241 66 74 chr5 84341196 84341834 -115288316 - L1MC4 LINE L1 -46 7996 7364 288 363 0 0 chr5 84342213 84342304 -115287846 + MIR3 SINE MIR 87 177 -31 282 312 136 40 chr5 84342420 84342545 -115287605 - L3 LINE CR1 0 1577 1441 2473 70 0 16 chr5 84343508 84343822 -115286328 + AluSc SINE Alu 1 309 0 292 273 133 81 chr5 84343863 84344029 -115286121 - MIR3 SINE MIR -9 199 20 300 294 138 0 chr5 84345656 84345765 -115284385 - L2 LINE L2 0 3313 3190 385 373 25 6 chr5 84346109 84346267 -115283883 + MIR SINE MIR 51 211 -51 332 261 100 119 chr5 84346645 84347055 -115283095 - MLT1J LTR MaLR 0 511 110 233 329 14 0 chr5 84346998 84347068 -115283082 - LTR67 LTR ERVL -386 171 101 * 292 248 19 29 chr5 84348399 84348504 -115281646 + CT-rich Low_complexity Low_complexity 1 104 0 1850 161 3 7 chr5 84348695 84349005 -115281145 - AluJb SINE Alu 0 312 4 838 237 12 0 chr5 84349365 84349534 -115280616 - MER5B DNA MER1_type -7 171 1 1847 204 8 124 chr5 84349693 84349843 -115280307 - MLT2B1 LTR ERVL -2 513 347 2242 99 0 26 chr5 84349843 84350146 -115280004 + AluSc SINE Alu 2 296 -13 1847 204 8 124 chr5 84350146 84350586 -115279564 - MLT2B1 LTR ERVL -168 347 1 2273 102 3 0 chr5 84352038 84352333 -115277817 + AluSx SINE Alu 2 297 -15 208 189 0 0 chr5 84352717 84352730 -115277420 + GA-rich Low_complexity Low_complexity 4 16 -24 1893 168 0 13 chr5 84352730 84353040 -115277110 + AluJb SINE Alu 1 306 -6 208 189 0 0 chr5 84353040 84353063 -115277087 + GA-rich Low_complexity Low_complexity 15 40 0 181 404 53 0 chr5 84353198 84353312 -115276838 - L2 LINE L2 -5 3267 3148 533 259 25 6 chr5 84353330 84353488 -115276662 - LTR33 LTR ERVL -1 520 360 938 242 29 47 chr5 84353522 84353799 -115276351 - LTR33 LTR ERVL -240 281 10 211 350 119 12 chr5 84353864 84354024 -115276126 - L2 LINE L2 -245 3027 2851 489 237 85 23 chr5 84354092 84354269 -115275881 - MLT1J LTR MaLR 0 511 324 872 275 26 13 chr5 84354309 84354538 -115275612 - MLT1J LTR MaLR -279 232 1 210 37 0 0 chr5 84355528 84355555 -115274595 + (TCCA)n Simple_repeat Simple_repeat 4 30 0 363 349 103 16 chr5 84355876 84356279 -115273871 - L2 LINE L2 -182 3090 2657 1099 246 107 17 chr5 84356300 84356646 -115273504 - L2 LINE L2 -5 3308 2932 252 331 130 63 chr5 84357960 84358259 -115271891 - L2 LINE L2 -14 3258 2940 29 47 0 0 chr5 84359802 84359845 -115270305 + AT_rich Low_complexity Low_complexity 1 43 0 731 254 77 34 chr5 84360507 84360980 -115269170 + L1MC4 LINE L1 7127 7578 -464 1633 98 9 5 chr5 84360980 84361204 -115268946 + AluSq SINE Alu 1 225 -88 731 254 77 34 chr5 84361204 84361529 -115268621 + L1MC4 LINE L1 7578 8041 -1 2959 9 0 0 chr5 84361569 84361915 -115268235 - AluYb8 SINE Alu 0 346 1 618 226 231 6 chr5 84363276 84363493 -115266657 - MIR SINE MIR 0 262 11 21 0 0 0 chr5 84363538 84363559 -115266591 + AT_rich Low_complexity Low_complexity 1 21 0 480 231 77 28 chr5 84363642 84363785 -115266365 + MER5A DNA MER1_type 35 184 -5 1991 148 72 28 chr5 84364665 84365024 -115265126 + THE1C LTR MaLR 1 375 0 10789 113 21 34 chr5 84365027 84366625 -115263525 + THE1C-int LTR MaLR 4 1580 0 1843 154 44 50 chr5 84366628 84366991 -115263159 + THE1B LTR MaLR 4 364 0 22 56 0 0 chr5 84367774 84367810 -115262340 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr5 84369356 84369386 -115260764 + AT_rich Low_complexity Low_complexity 1 30 0 1609 157 39 42 chr5 84371055 84371101 -115259049 - L1MB7 LINE L1 -8 6176 6131 2074 112 3 48 chr5 84371101 84371413 -115258737 - AluSx SINE Alu -14 298 1 1609 157 39 42 chr5 84371413 84371454 -115258696 - L1MB7 LINE L1 -53 6131 6091 198 0 0 0 chr5 84371454 84371476 -115258674 + (CA)n Simple_repeat Simple_repeat 2 23 0 1609 157 39 42 chr5 84371476 84371724 -115258426 - L1MB7 LINE L1 -93 6091 5841 1429 168 25 54 chr5 84371771 84372086 -115258064 - L1MB5 LINE L1 0 6174 5869 5568 37 0 2 chr5 84372189 84372830 -115257320 + HERVK11 LTR ERVK 7308 7947 -6 8754 71 3 13 chr5 84372837 84373918 -115256232 + MER11C LTR ERVK 2 1071 0 439 342 124 17 chr5 84373918 84374369 -115255781 - L2 LINE L2 -342 2972 2470 327 326 124 30 chr5 84375949 84376182 -115253968 - MIR SINE MIR -6 256 2 2077 113 6 31 chr5 84376851 84377169 -115252981 + AluSx SINE Alu 1 310 -2 228 141 141 47 chr5 84377395 84377480 -115252670 - L1ME4a LINE L1 0 6121 6029 1964 135 37 3 chr5 84377529 84377826 -115252324 - AluSx SINE Alu -5 307 1 1966 149 0 10 chr5 84377853 84378148 -115252002 + AluJo SINE Alu 1 292 -20 534 256 55 118 chr5 84378188 84378755 -115251395 - LTR67 LTR ERVL -6 551 21 347 267 25 25 chr5 84378777 84378897 -115251253 - L1ME4a LINE L1 -202 5919 5800 271 241 0 38 chr5 84382049 84382079 -115248071 + (TA)n Simple_repeat Simple_repeat 2 32 -45 189 0 0 0 chr5 84382079 84382100 -115248050 + (CA)n Simple_repeat Simple_repeat 2 22 0 2461 133 86 25 chr5 84382100 84382507 -115247643 + Tigger2a DNA MER2_type 3 434 0 271 241 0 38 chr5 84382507 84382554 -115247596 + (TA)n Simple_repeat Simple_repeat 30 77 0 370 128 0 39 chr5 84382886 84382964 -115247186 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 431 309 28 66 chr5 84383540 84383721 -115246429 + MER91A DNA MER1_type 1 174 -22 3501 163 35 59 chr5 84383959 84385126 -115245024 + L1MB8 LINE L1 4856 5986 -192 77 38 0 0 chr5 84385126 84385231 -115244919 + AT_rich Low_complexity Low_complexity 1 105 0 2062 130 0 7 chr5 84385237 84385529 -115244621 - AluSx SINE Alu -22 290 1 2383 215 35 21 chr5 84385530 84386180 -115243970 - L1M4 LINE L1 -1776 4370 3712 1179 308 108 20 chr5 84386509 84387048 -115243102 - L2 LINE L2 -4 3309 2684 2850 143 9 30 chr5 84387048 84387489 -115242661 - MSTB1 LTR MaLR 0 432 1 1179 308 108 20 chr5 84387489 84387677 -115242473 - L2 LINE L2 -629 2684 2514 831 295 55 0 chr5 84387670 84387907 -115242243 - MIR SINE MIR 0 262 13 * 585 261 124 98 chr5 84387931 84388398 -115241752 - L2 LINE L2 -806 2508 2030 310 277 106 31 chr5 84388605 84388926 -115241224 - L1M4 LINE L1 -1462 4684 4340 248 237 17 0 chr5 84388931 84388990 -115241160 - LTR67 LTR ERVL -8 549 490 302 255 110 40 chr5 84389141 84389341 -115240809 + L1MC/D LINE L1 5255 5468 -2340 25 31 0 0 chr5 84389579 84389611 -115240539 + AT_rich Low_complexity Low_complexity 1 32 0 778 89 20 0 chr5 84389614 84389715 -115240435 + AluSq/x SINE Alu 2 104 -209 23 33 0 0 chr5 84389732 84389762 -115240388 + AT_rich Low_complexity Low_complexity 1 30 0 764 236 56 14 chr5 84390248 84390464 -115239686 + MIR SINE MIR 37 261 -1 417 245 43 0 chr5 84390862 84390956 -115239194 + MER91C DNA MER1_type 32 129 -11 191 372 47 8 chr5 84390962 84391091 -115239059 + L2 LINE L2 2246 2379 -935 2642 90 20 6 chr5 84391246 84391601 -115238549 - L1PB2 LINE L1 -3 6148 5789 315 214 0 0 chr5 84391601 84391671 -115238479 + (TG)n Simple_repeat Simple_repeat 2 71 0 5523 170 12 18 chr5 84391671 84392757 -115237393 - L1PB2 LINE L1 -359 5792 4701 2397 83 0 3 chr5 84392757 84393069 -115237081 - AluY SINE Alu 0 311 1 2204 115 0 0 chr5 84393073 84393378 -115236772 - AluSq SINE Alu -8 305 1 5523 170 12 18 chr5 84393378 84393915 -115236235 - L1PB2 LINE L1 -1453 4698 4175 885 84 8 0 chr5 84394818 84394937 -115235213 + MLT2B2 LTR ERVL 1 120 -395 213 60 20 40 chr5 84395572 84395622 -115234528 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 252 388 0 12 chr5 84396399 84396484 -115233666 - MER5A DNA MER1_type -105 84 1 629 215 139 0 chr5 84396512 84396670 -115233480 - MER91B DNA MER1_type -10 180 1 25 51 0 0 chr5 84396912 84396951 -115233199 + AT_rich Low_complexity Low_complexity 1 39 0 209 385 46 0 chr5 84397326 84397456 -115232694 + L2 LINE L2 2550 2685 -629 543 96 0 0 chr5 84397676 84397759 -115232391 + (TA)n Simple_repeat Simple_repeat 1 83 0 379 314 39 32 chr5 84397772 84397928 -115232222 - MER5B DNA MER1_type -2 176 20 241 337 47 47 chr5 84397985 84398154 -115231996 + L2 LINE L2 2719 2887 -427 190 333 0 19 chr5 84398227 84398281 -115231869 + L2 LINE L2 3125 3177 -95 281 26 26 0 chr5 84398317 84398355 -115231795 + (CA)n Simple_repeat Simple_repeat 1 39 0 403 266 90 40 chr5 84398770 84398947 -115231203 + MER5A DNA MER1_type 2 187 -2 2214 128 7 0 chr5 84399466 84399772 -115230378 + AluSx SINE Alu 1 308 -4 1661 194 25 78 chr5 84399792 84400188 -115229962 - MLT1B LTR MaLR -15 375 1 1091 151 0 0 chr5 84400518 84400677 -115229473 - FRAM SINE Alu -7 159 1 1143 171 123 17 chr5 84400829 84401121 -115229029 - MER33 DNA MER1_type -1 323 1 259 179 119 15 chr5 84401851 84401918 -115228232 + L2 LINE L2 3238 3311 -2 183 100 0 0 chr5 84403091 84403121 -115227029 + (CA)n Simple_repeat Simple_repeat 1 30 0 285 294 8 92 chr5 84403144 84403170 -115226980 - L1MEd LINE L1 -5458 661 634 2113 122 3 3 chr5 84403170 84403464 -115226686 - AluSx SINE Alu -18 294 1 2284 120 0 0 chr5 84403474 84403783 -115226367 - AluSx SINE Alu -3 309 1 285 294 8 92 chr5 84403783 84403864 -115226286 - L1MEd LINE L1 -5494 625 553 643 237 99 66 chr5 84404470 84404881 -115225269 - L1MEd LINE L1 -906 1584 1069 457 198 139 10 chr5 84404881 84404982 -115225168 + MER81 DNA DNA 1 114 0 643 237 99 66 chr5 84404982 84405073 -115225077 - L1MEd LINE L1 -1421 1069 983 5768 58 22 0 chr5 84405109 84405802 -115224348 - L1PA5 LINE L1 0 6154 5447 7249 38 1 0 chr5 84405802 84406653 -115223497 + L1P LINE L1 3483 4334 -1812 1017 298 38 28 chr5 84406758 84407158 -115222992 - L1MEd LINE L1 -5289 830 427 784 248 71 17 chr5 84407379 84407617 -115222533 - MIR SINE MIR 0 262 12 299 195 85 12 chr5 84407642 84407724 -115222426 - L1MEd LINE L1 -6030 89 2 614 205 19 139 chr5 84408005 84408220 -115221930 + MER5A DNA MER1_type 1 189 0 2144 106 0 0 chr5 84408516 84408799 -115221351 - AluSg SINE Alu -25 285 3 370 376 103 11 chr5 84408821 84409172 -115220978 + L2 LINE L2 1857 2239 -1075 323 284 10 39 chr5 84409493 84409595 -115220555 + L2 LINE L2 2226 2324 -990 25 65 0 0 chr5 84410705 84410751 -115219399 + AT_rich Low_complexity Low_complexity 1 46 0 197 20 0 100 chr5 84410751 84410801 -115219349 + (TTTTTA)n Simple_repeat Simple_repeat 5 49 0 1726 134 0 4 chr5 84410883 84411130 -115219020 + AluSx SINE Alu 59 304 -8 262 389 19 25 chr5 84411364 84411521 -115218629 - MIR SINE MIR -87 175 20 400 154 35 22 chr5 84412374 84412494 -115217656 - LTR37A LTR ERV1 0 426 339 2101 121 27 10 chr5 84412664 84412961 -115217189 - AluSg SINE Alu -8 302 1 2330 169 91 121 chr5 84413205 84413624 -115216526 + LTR8A LTR ERV1 1 388 -339 2052 118 0 30 chr5 84413624 84413921 -115216229 - AluSx SINE Alu -24 288 1 2330 169 91 121 chr5 84413921 84414251 -115215899 + LTR8A LTR ERV1 388 727 0 646 227 8 126 chr5 84414430 84414668 -115215482 + MER58A DNA MER1_type 4 213 -11 1435 258 121 45 chr5 84414705 84414754 -115215396 + L1MCc LINE L1 801 845 -5791 2406 75 3 10 chr5 84414754 84415060 -115215090 + AluY SINE Alu 1 304 -7 1435 258 121 45 chr5 84415060 84415119 -115215031 + L1MCc LINE L1 845 898 -5738 2492 125 21 26 chr5 84415119 84415496 -115214654 - THE1C LTR MaLR 0 375 1 1435 258 121 45 chr5 84415496 84416277 -115213873 + L1MCc LINE L1 898 1747 -4889 1710 207 25 16 chr5 84416285 84416729 -115213421 + L1M4 LINE L1 4384 4831 -1315 1946 114 7 59 chr5 84416740 84416993 -115213157 + MER47A DNA MER2_type 1 238 -2085 2342 67 0 0 chr5 84416993 84417309 -115212841 + AluY SINE Alu 1 316 0 1946 114 7 59 chr5 84417309 84417361 -115212789 + MER47A DNA MER2_type 238 291 -75 815 181 0 0 chr5 84417361 84417494 -115212656 - FLAM_C SINE Alu -9 134 2 432 110 164 0 chr5 84417494 84417567 -115212583 + MER47A DNA MER2_type 282 366 0 484 156 0 13 chr5 84417581 84417658 -115212492 + L1M4 LINE L1 4869 4944 -1202 303 53 0 53 chr5 84417665 84417722 -115212428 + (TA)n Simple_repeat Simple_repeat 2 55 0 815 202 147 53 chr5 84417773 84417944 -115212206 - L1M4 LINE L1 -763 5383 5229 1818 152 50 3 chr5 84417944 84418241 -115211909 - AluSq SINE Alu -1 312 2 815 202 147 53 chr5 84418241 84418276 -115211874 - L1M4 LINE L1 -917 5229 5199 2221 113 0 0 chr5 84418276 84418569 -115211581 - AluSx SINE Alu -18 294 2 815 202 147 53 chr5 84418569 84418702 -115211448 - L1M4 LINE L1 -947 5199 5011 427 319 9 9 chr5 84418702 84418818 -115211332 - MLT1G3 LTR MaLR -286 244 129 1706 212 64 100 chr5 84418820 84419188 -115210962 - LTR8 LTR ERV1 0 691 311 2265 124 119 57 chr5 84419188 84419442 -115210708 + MSTA LTR MaLR 1 238 -190 2758 10 0 13 chr5 84419442 84419752 -115210398 - AluY SINE Alu -5 306 1 2265 124 119 57 chr5 84419752 84419857 -115210293 + MSTA LTR MaLR 238 390 -38 2248 105 10 0 chr5 84419857 84420162 -115209988 - AluSg SINE Alu -2 308 1 2265 124 119 57 chr5 84420162 84420204 -115209946 + MSTA LTR MaLR 390 428 0 1706 212 64 100 chr5 84420204 84420354 -115209796 - LTR8 LTR ERV1 -380 311 192 959 128 0 8 chr5 84420455 84420588 -115209562 - FLAM_C SINE Alu -1 132 1 405 279 68 14 chr5 84420605 84420752 -115209398 + HERVL LTR ERVL 2937 3091 -2563 587 352 42 3 chr5 84420770 84421054 -115209096 + HERVL LTR ERVL 3213 3507 -2257 706 139 52 35 chr5 84421203 84421318 -115208832 + FLAM_A SINE Alu 1 117 -16 318 67 0 0 chr5 84421321 84421366 -115208784 + (GA)n Simple_repeat Simple_repeat 2 46 0 1250 313 98 31 chr5 84421490 84422292 -115207858 + HERVL LTR ERVL 4076 4931 -833 2239 111 3 0 chr5 84422737 84423035 -115207115 + AluSq SINE Alu 1 299 -14 539 207 18 9 chr5 84423427 84423538 -115206612 + LTR67 LTR ERVL 432 543 -14 197 271 0 0 chr5 84423561 84423609 -115206541 + L2 LINE L2 3219 3266 -6 474 290 13 13 chr5 84424984 84425139 -115205011 + L2 LINE L2 3159 3313 0 1690 123 8 0 chr5 84425367 84425628 -115204522 - AluSx SINE Alu 0 309 47 2321 73 257 6 chr5 84425628 84425986 -115204164 + LTR7 LTR ERV1 1 448 -2 25941 89 49 26 chr5 84425988 84429892 -115200258 + HERVH LTR ERV1 1 3993 -3720 4372 143 1 1 chr5 84429896 84430553 -115199597 + HERVH LTR ERV1 4490 5146 -2567 1454 120 18 5 chr5 84430557 84430774 -115199376 + HERVH LTR ERV1 5600 5819 -1894 * 2347 106 53 13 chr5 84430772 84431149 -115199001 + HERVH LTR ERV1 7322 7713 0 2940 75 95 5 chr5 84431149 84431560 -115198590 + LTR7 LTR ERV1 1 448 -2 293 139 0 0 chr5 84431562 84431605 -115198545 - AluSx SINE Alu -251 51 9 1345 102 0 0 chr5 84431930 84432106 -115198044 - AluSc SINE Alu -5 304 129 2297 112 0 0 chr5 84432303 84432608 -115197542 - AluSc SINE Alu -4 305 1 278 325 63 30 chr5 84432712 84432854 -115197296 + L1MC4a LINE L1 4600 4736 -1410 2196 123 0 0 chr5 84432854 84433147 -115197003 - AluSq SINE Alu -20 293 1 278 325 63 30 chr5 84433147 84433626 -115196524 + L1MC4a LINE L1 4736 5241 -905 217 229 0 0 chr5 84433641 84433702 -115196448 + (TTATA)n Simple_repeat Simple_repeat 2 62 0 424 295 80 18 chr5 84433706 84434026 -115196124 + L1MC4a LINE L1 5255 5593 -572 1756 251 101 40 chr5 84434033 84434247 -115195903 - L2 LINE L2 0 3313 3114 1970 140 25 0 chr5 84434247 84434533 -115195617 + AluSx SINE Alu 1 293 -19 180 111 0 0 chr5 84434540 84434567 -115195583 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1756 251 101 40 chr5 84434567 84435333 -115194817 - L2 LINE L2 -204 3109 2267 311 199 51 38 chr5 84435366 84435515 -115194635 - L1MC4 LINE L1 -1333 6709 6612 436 208 0 29 chr5 84435517 84435690 -115194460 + (TA)n Simple_repeat Simple_repeat 1 168 0 282 29 0 0 chr5 84435698 84435733 -115194417 + (TG)n Simple_repeat Simple_repeat 2 36 0 809 263 53 0 chr5 84435733 84435954 -115194196 - L2 LINE L2 -1095 2219 1984 1305 119 0 0 chr5 84435955 84436132 -115194018 + AluSq SINE Alu 135 311 -2 353 283 162 22 chr5 84436149 84436421 -115193729 + L1MC4a LINE L1 5574 5883 -1925 350 229 271 0 chr5 84436538 84436678 -115193472 + MIR SINE MIR 83 260 -2 28 29 0 0 chr5 84436693 84436728 -115193422 + AT_rich Low_complexity Low_complexity 1 35 0 246 274 0 14 chr5 84437350 84437423 -115192727 - L3 LINE CR1 -243 1334 1263 211 341 236 0 chr5 84438187 84438310 -115191840 - L3 LINE CR1 -306 1271 1120 293 256 89 48 chr5 84438527 84438695 -115191455 + L3 LINE CR1 792 966 -611 523 181 302 13 chr5 84438994 84439097 -115191053 + MER3 DNA MER1_type 7 79 -130 198 71 0 0 chr5 84439097 84439125 -115191025 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 523 181 302 13 chr5 84439125 84439170 -115190980 + MER3 DNA MER1_type 79 198 -11 283 159 32 32 chr5 84439127 84439190 -115190960 - MER3 DNA MER1_type -106 103 41 * 252 227 91 30 chr5 84439444 84439510 -115190640 + MIR SINE MIR 25 94 -168 342 149 90 0 chr5 84440150 84440217 -115189933 - L1MB8 LINE L1 -158 6020 5948 1815 185 0 0 chr5 84442045 84442342 -115187808 - AluJo SINE Alu -15 297 1 2220 102 0 0 chr5 84442347 84442679 -115187471 - AluSg SINE Alu 0 333 2 2671 143 41 7 chr5 84443048 84443489 -115186661 + L1MB3 LINE L1 5725 6180 -3 278 125 0 36 chr5 84443505 84443561 -115186589 + L1MB3 LINE L1 6129 6182 -1 242 210 65 0 chr5 84444084 84444146 -115186004 + L3 LINE CR1 957 1022 -555 948 159 122 12 chr5 84444852 84445097 -115185053 - MER5C DNA MER1_type -1 323 52 227 161 0 36 chr5 84446397 84446453 -115183697 - LTR66 LTR ERVL -155 455 402 533 270 55 45 chr5 84446567 84446767 -115183383 + MIR SINE MIR 5 206 -56 21 0 0 0 chr5 84446808 84446829 -115183321 + AT_rich Low_complexity Low_complexity 1 21 0 2108 116 20 0 chr5 84446836 84447128 -115183022 + AluSx SINE Alu 1 298 -14 840 190 128 104 chr5 84448222 84448485 -115181665 + LTR37B LTR ERV1 9 287 -181 2331 90 0 0 chr5 84448485 84448784 -115181366 - AluSg SINE Alu -11 299 1 840 190 128 104 chr5 84448784 84448951 -115181199 + LTR37B LTR ERV1 287 449 -19 887 179 23 23 chr5 84449953 84450126 -115180024 - FAM SINE Alu -1 48 1 625 227 78 7 chr5 84450342 84450496 -115179654 + MIR SINE MIR 21 185 -77 734 481 82 7 chr5 84450757 84451027 -115179123 + AluSc SINE Alu 1 290 -9 198 0 0 0 chr5 84451313 84451335 -115178815 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2472 40 0 30 chr5 84451339 84451642 -115178508 - AluY SINE Alu -17 294 1 1648 172 19 38 chr5 84451742 84452055 -115178095 + MER93b LTR ERV1 1 307 -66 865 40 111 16 chr5 84452055 84452181 -115177969 - MER85 DNA T2_type -1 138 1 1731 158 4 4 chr5 84452207 84452485 -115177665 - AluJo SINE Alu -10 302 25 353 103 0 35 chr5 84452487 84452545 -115177605 + MER93a LTR ERV1 347 402 0 545 279 34 40 chr5 84452656 84452870 -115177280 - MER20B DNA MER1_type 0 219 2 2255 101 0 0 chr5 84453412 84453698 -115176452 - AluSx SINE Alu -21 291 6 756 177 15 0 chr5 84453986 84454116 -115176034 - FRAM SINE Alu -2 174 43 969 116 0 0 chr5 84454234 84454363 -115175787 - AluSg/x SINE Alu -13 297 169 1577 53 0 5 chr5 84454463 84454652 -115175498 + AluY SINE Alu 104 291 -20 281 289 61 55 chr5 84454707 84455070 -115175080 - HAL1b LINE L1 -868 480 116 189 0 0 0 chr5 84457212 84457233 -115172917 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 1636 122 34 34 chr5 84457291 84457553 -115172597 + AluSx SINE Alu 2 263 -49 198 0 0 0 chr5 84457565 84457587 -115172563 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 6299 74 42 35 chr5 84457680 84458624 -115171526 - SVA Other Other -3 1383 433 5157 87 34 28 chr5 84458642 84459565 -115170585 - SVA Other Other -518 868 16 434 308 88 42 chr5 84460501 84460764 -115169386 + L2 LINE L2 2211 2485 -829 2403 50 0 7 chr5 84460878 84461178 -115168972 - AluY SINE Alu -13 298 1 1078 52 75 0 chr5 84461178 84461312 -115168838 - AluY SINE Alu -167 144 1 443 261 33 39 chr5 84461509 84461662 -115168488 + L2 LINE L2 3161 3312 -1 1839 168 3 0 chr5 84461876 84462203 -115167947 + AluSx SINE Alu 1 312 0 1884 144 10 17 chr5 84462240 84462539 -115167611 - AluJo SINE Alu -15 297 1 210 37 0 0 chr5 84462834 84462861 -115167289 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2006 132 7 7 chr5 84463258 84463553 -115166597 - AluSx SINE Alu -17 295 1 2084 121 24 0 chr5 84463558 84463848 -115166302 - AluSx SINE Alu -15 297 1 180 0 0 0 chr5 84463945 84463965 -115166185 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1804 135 18 15 chr5 84463969 84464243 -115165907 - AluSx SINE Alu -37 275 1 2147 63 49 18 chr5 84464718 84465004 -115165146 - AluY SINE Alu -16 295 1 252 279 62 53 chr5 84465013 84465257 -115164893 - L1M4 LINE L1 -1771 4375 4130 591 249 15 60 chr5 84465921 84466122 -115164028 - Charlie8 DNA MER1_type -2225 192 1 562 219 29 19 chr5 84466435 84466620 -115163530 - L1MA10 LINE L1 0 6164 5988 1960 118 0 4 chr5 84466661 84466924 -115163226 + AluSq SINE Alu 36 297 -16 716 204 96 6 chr5 84466951 84467108 -115163042 - AluJo/FRAM SINE Alu -8 304 134 1846 162 7 14 chr5 84467108 84467404 -115162746 - AluJo SINE Alu -18 294 1 45 0 0 33 chr5 84467482 84467526 -115162624 + AT_rich Low_complexity Low_complexity 1 44 -14 2061 120 14 7 chr5 84467526 84467818 -115162332 - AluSx SINE Alu -18 294 1 45 0 0 33 chr5 84467818 84467833 -115162317 + AT_rich Low_complexity Low_complexity 44 58 0 31 0 0 0 chr5 84467980 84468011 -115162139 + AT_rich Low_complexity Low_complexity 1 31 0 788 272 25 15 chr5 84468189 84468391 -115161759 + MIR SINE MIR 11 214 -48 649 144 0 16 chr5 84468396 84468521 -115161629 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 2203 121 3 0 chr5 84468533 84468840 -115161310 - AluSg SINE Alu -2 308 1 213 346 92 52 chr5 84469139 84469445 -115160705 + L2 LINE L2 2561 2878 -436 1239 259 87 17 chr5 84470138 84470231 -115159919 - Tigger8 DNA MER2_type -100 566 481 240 35 0 0 chr5 84470231 84470260 -115159890 + (TG)n Simple_repeat Simple_repeat 2 30 0 2008 114 0 40 chr5 84470260 84470557 -115159593 - AluSx SINE Alu -27 285 1 1239 259 87 17 chr5 84470557 84470991 -115159159 - Tigger8 DNA MER2_type -184 482 1 255 176 71 24 chr5 84471135 84471220 -115158930 + (TTTAA)n Simple_repeat Simple_repeat 3 91 0 1707 129 4 12 chr5 84471399 84471654 -115158496 - AluJo SINE Alu -59 253 1 557 275 93 25 chr5 84471819 84472055 -115158095 + MIR SINE MIR 1 252 -10 1744 242 67 9 chr5 84472077 84472527 -115157623 + L1PA15 LINE L1 1061 1536 -5251 16206 184 26 17 chr5 84472548 84475771 -115154379 + L1PA15 LINE L1 1683 4969 -1847 2141 120 13 0 chr5 84475771 84476071 -115154079 - AluSx SINE Alu -8 304 1 16206 184 26 17 chr5 84476071 84477935 -115152215 + L1PA15 LINE L1 4969 6815 -1 881 111 7 0 chr5 84477935 84478066 -115152084 + L1PA15 LINE L1 6025 6160 -5 420 308 103 63 chr5 84478068 84478416 -115151734 + L1MC4a LINE L1 6277 6638 -1170 779 200 29 178 chr5 84478420 84478972 -115151178 + L1MC5 LINE L1 6693 7143 -818 1885 123 34 24 chr5 84478972 84479264 -115150886 + AluSq SINE Alu 1 295 -18 779 200 29 178 chr5 84479264 84479336 -115150814 + L1MC5 LINE L1 7143 7224 -737 308 241 109 29 chr5 84479535 84479672 -115150478 + L1MC5 LINE L1 7350 7497 -464 389 204 45 0 chr5 84479884 84479972 -115150178 - MER5C DNA MER1_type -200 124 33 259 274 16 0 chr5 84479981 84480043 -115150107 - MER5C DNA MER1_type -260 64 2 271 214 71 0 chr5 84480047 84480131 -115150019 + L1MC5 LINE L1 7501 7590 -371 225 239 9 37 chr5 84480226 84480335 -115149815 + L1MC4 LINE L1 7914 8019 -23 2217 116 0 0 chr5 84480400 84480703 -115149447 - AluSx SINE Alu -3 309 7 25 51 0 0 chr5 84481146 84481185 -115148965 + AT_rich Low_complexity Low_complexity 1 39 0 616 128 0 75 chr5 84481424 84481557 -115148593 - L1MC5 LINE L1 -28 7933 7811 25 0 0 0 chr5 84481671 84481696 -115148454 + AT_rich Low_complexity Low_complexity 1 25 0 911 110 8 30 chr5 84481764 84481967 -115148183 - L1MB2 LINE L1 -7 6164 5906 2053 102 0 0 chr5 84481967 84482231 -115147919 - AluSc SINE Alu -10 299 36 911 110 8 30 chr5 84482231 84482290 -115147860 - L1MB2 LINE L1 -265 5906 5847 1689 189 3 10 chr5 84482572 84482869 -115147281 - AluJb SINE Alu -17 295 1 23 54 0 0 chr5 84484487 84484524 -115145626 + AT_rich Low_complexity Low_complexity 1 37 0 407 353 139 22 chr5 84486243 84486654 -115143496 + L2 LINE L2 2329 2787 -527 243 250 110 15 chr5 84486733 84486869 -115143281 - L1M4 LINE L1 -5667 1188 1040 431 238 44 23 chr5 84487250 84487433 -115142717 - L1M4 LINE L1 -6318 537 69 315 194 46 9 chr5 84487461 84487569 -115142581 - L1P5 LINE L1 -717 5434 5323 254 413 0 14 chr5 84487627 84487765 -115142385 + L2 LINE L2 3048 3183 -89 1792 169 3 7 chr5 84487765 84488060 -115142090 - AluSx SINE Alu -6 306 13 2021 118 34 3 chr5 84488068 84488365 -115141785 - AluSc SINE Alu -3 306 1 3363 85 37 0 chr5 84488365 84489018 -115141132 - L1PB1 LINE L1 -178 5973 5254 15558 56 3 1 chr5 84489022 84491118 -115139032 - L1P LINE L1 -3077 3069 971 5281 197 18 22 chr5 84491115 84491795 -115138355 - L1PB1 LINE L1 -905 5241 4568 * 2352 94 0 7 chr5 84491795 84492104 -115138046 - AluY SINE Alu -4 307 1 5281 197 18 22 chr5 84492104 84492754 -115137396 - L1PB1 LINE L1 -1578 4568 3917 2694 276 108 42 chr5 84492833 84494183 -115135967 + L2 LINE L2 1885 3313 0 823 248 156 29 chr5 84495563 84495878 -115134272 - MLT1H LTR MaLR 0 549 195 249 200 50 0 chr5 84495932 84495992 -115134158 - MLT1H LTR MaLR -486 63 1 335 306 61 39 chr5 84496257 84496437 -115133713 + HAL1 LINE L1 2262 2445 -62 1675 124 0 4 chr5 84496438 84496697 -115133453 + MER2 DNA MER2_type 2 259 -86 2307 72 0 40 chr5 84496715 84496857 -115133293 + AluSg SINE Alu 1 126 -184 2387 81 0 3 chr5 84496857 84497154 -115132996 + AluSc SINE Alu 1 296 -13 2307 72 0 40 chr5 84497154 84497315 -115132835 + AluSg SINE Alu 126 292 -18 577 137 43 43 chr5 84498103 84498242 -115131908 + L1MD2 LINE L1 6218 6356 -3 301 274 14 0 chr5 84498242 84498315 -115131835 + L1ME1 LINE L1 5951 6024 -142 891 112 0 8 chr5 84498623 84498748 -115131402 + FLAM_C SINE Alu 1 124 -19 23 0 0 0 chr5 84498839 84498862 -115131288 + AT_rich Low_complexity Low_complexity 1 23 0 3848 115 40 0 chr5 84499082 84499690 -115130460 - MER39B LTR ERV1 -21 632 1 186 125 31 0 chr5 84499737 84499769 -115130381 - L2 LINE L2 -13 3300 3268 189 307 55 43 chr5 84499804 84499967 -115130183 + L2 LINE L2 1900 2064 -1250 774 204 0 14 chr5 84499968 84500110 -115130040 - FRAM SINE Alu -18 158 19 21 36 0 0 chr5 84500391 84500419 -115129731 + AT_rich Low_complexity Low_complexity 1 28 0 302 250 174 70 chr5 84500513 84500685 -115129465 - MLT1J LTR MaLR -321 190 1 799 132 11 58 chr5 84500857 84501031 -115129119 + L1MC2 LINE L1 5940 6105 -239 300 152 45 15 chr5 84501034 84501100 -115129050 - LTR37A LTR ERV1 -334 92 25 1959 113 0 92 chr5 84501311 84501639 -115128511 + AluSx SINE Alu 6 303 -9 2781 0 0 0 chr5 84501825 84502123 -115128027 - AluYa5 SINE Alu -13 298 1 338 308 79 28 chr5 84502142 84502574 -115127576 - L1M4 LINE L1 -2027 4119 3666 225 359 72 10 chr5 84502652 84502847 -115127303 - LTR16C LTR ERVL 0 491 285 1917 149 7 0 chr5 84503440 84503722 -115126428 - AluJo SINE Alu -28 284 1 1652 243 81 17 chr5 84504311 84504833 -115125317 - MLT1H1 LTR MaLR 0 555 1 279 292 85 0 chr5 84504944 84505074 -115125076 + L1ME LINE L1 5482 5622 -499 446 304 87 65 chr5 84505426 84505781 -115124369 + L2 LINE L2 2873 3235 -78 392 306 106 17 chr5 84505782 84505962 -115124188 + L2 LINE L2 3118 3313 0 2725 268 63 19 chr5 84506311 84506635 -115123515 - L1MEc LINE L1 -5143 1253 945 1814 129 163 37 chr5 84506635 84507015 -115123135 - MSTA LTR MaLR 0 428 1 9868 122 23 33 chr5 84507015 84508608 -115121542 - MSTA-int LTR MaLR 0 1580 3 1999 122 168 11 chr5 84508610 84508980 -115121170 - MSTA LTR MaLR 0 428 1 2725 268 63 19 chr5 84508980 84509799 -115120351 - L1MEc LINE L1 -5451 945 56 1077 178 45 116 chr5 84510774 84511172 -115118978 + MLT1B LTR MaLR 6 375 -15 21 0 0 0 chr5 84511395 84511416 -115118734 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 84511558 84511582 -115118568 + AT_rich Low_complexity Low_complexity 1 24 0 5131 22 0 0 chr5 84512399 84513029 -115117121 - L1PA3 LINE L1 -1098 5048 4419 7699 20 1 2 chr5 84513029 84514140 -115116010 + L1PA3 LINE L1 5049 6155 0 311 285 80 28 chr5 84514617 84514832 -115115318 - L1MC4a LINE L1 -146 5975 5748 425 230 48 38 chr5 84514840 84515072 -115115078 - HAL1b LINE L1 -134 2373 746 1574 180 27 63 chr5 84515296 84515596 -115114554 + AluJo SINE Alu 1 289 -23 1479 261 65 31 chr5 84517293 84517932 -115112218 - L1MC4a LINE L1 -780 5366 5268 488 190 307 7 chr5 84518680 84518817 -115111333 - MER5B DNA MER1_type 0 178 1 317 179 42 53 chr5 84518922 84519017 -115111133 - MER5A DNA MER1_type -87 102 9 374 344 38 19 chr5 84519135 84519295 -115110855 + MIR3 SINE MIR 39 201 -7 180 254 182 61 chr5 84519396 84519577 -115110573 - L2 LINE L2 -99 3214 3012 1906 146 26 34 chr5 84520323 84520673 -115109477 + MER7A DNA MER2_type 2 346 0 670 214 71 22 chr5 84520786 84520968 -115109182 - MLT1K LTR MaLR -9 579 389 180 0 0 0 chr5 84521006 84521026 -115109124 + (T)n Simple_repeat Simple_repeat 1 20 0 1310 184 73 17 chr5 84521835 84522123 -115108027 - MLT1C LTR MaLR 0 467 164 425 282 136 61 chr5 84522421 84522715 -115107435 + L3 LINE CR1 1249 1564 -13 248 253 38 25 chr5 84522881 84522960 -115107190 - MIR SINE MIR 0 262 183 231 261 102 19 chr5 84523818 84523975 -115106175 - L1ME4a LINE L1 -5 6116 5947 331 277 0 9 chr5 84523993 84524105 -115106045 - L1MC4a LINE L1 -1926 5882 5772 22 56 0 0 chr5 84524508 84524544 -115105606 + AT_rich Low_complexity Low_complexity 1 36 0 276 258 21 91 chr5 84524774 84524960 -115105190 - L1MC4 LINE L1 -5 8037 7865 505 249 100 26 chr5 84524980 84525157 -115104993 + L1ME4a LINE L1 5671 5870 -251 1778 140 46 7 chr5 84525157 84525442 -115104708 + AluSx SINE Alu 1 296 -16 505 249 100 26 chr5 84525442 84525493 -115104657 + L1ME4a LINE L1 5870 5916 -205 457 187 36 12 chr5 84526227 84526393 -115103757 + (TA)n Simple_repeat Simple_repeat 1 170 0 1737 168 3 16 chr5 84526395 84526704 -115103446 - AluJo SINE Alu -5 307 3 232 310 81 11 chr5 84526967 84527054 -115103096 + MIR SINE MIR 16 108 -100 1653 206 0 13 chr5 84527613 84527929 -115102221 + AluJo SINE Alu 1 312 0 2277 97 3 3 chr5 84528071 84528369 -115101781 - AluSx SINE Alu -14 298 1 1157 108 34 0 chr5 84528389 84528565 -115101585 + L1PA13 LINE L1 5978 6159 -4 347 252 122 14 chr5 84528949 84529088 -115101062 + L3 LINE CR1 515 668 -909 182 61 0 61 chr5 84529353 84529386 -115100764 + (TAA)n Simple_repeat Simple_repeat 3 33 0 552 208 138 19 chr5 84529401 84529560 -115100590 - MIR SINE MIR -14 248 71 2144 89 24 10 chr5 84529781 84530073 -115100077 + AluSx SINE Alu 1 296 -16 182 237 0 85 chr5 84532200 84532259 -115097891 + L3 LINE CR1 1516 1569 -8 3210 63 2 16 chr5 84532703 84533130 -115097020 + L1PA7 LINE L1 5719 6139 -15 229 67 22 22 chr5 84533261 84533306 -115096844 + (TA)n Simple_repeat Simple_repeat 1 45 0 22 94 0 0 chr5 84533620 84533684 -115096466 + AT_rich Low_complexity Low_complexity 1 64 0 288 222 111 25 chr5 84534098 84534179 -115095971 + L2 LINE L2 3149 3236 -36 200 390 80 20 chr5 84535301 84535601 -115094549 + L2 LINE L2 1712 2029 -1285 754 244 64 4 chr5 84537695 84537929 -115092221 + MER112 DNA MER1_type 1 248 -12 336 350 36 7 chr5 84538020 84538157 -115091993 + MIR SINE MIR 4 144 -118 218 341 12 0 chr5 84538321 84538406 -115091744 + MIR SINE MIR 107 192 -70 21 57 0 0 chr5 84540175 84540210 -115089940 + AT_rich Low_complexity Low_complexity 1 35 0 1946 146 4 0 chr5 84540231 84540556 -115089594 + AluSx SINE Alu 1 326 0 1713 140 16 57 chr5 84541619 84541934 -115088216 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr5 84542140 84542161 -115087989 + AT_rich Low_complexity Low_complexity 1 21 0 2053 165 3 0 chr5 84543004 84543319 -115086831 + 7SLRNA srpRNA srpRNA 1 316 -4 992 116 58 69 chr5 84543756 84543945 -115086205 - THE1B LTR MaLR 0 364 178 15102 41 5 0 chr5 84543945 84546593 -115083557 - L1PA5 LINE L1 0 6154 3525 24 0 0 0 chr5 84546717 84546741 -115083409 + AT_rich Low_complexity Low_complexity 1 24 0 569 309 60 19 chr5 84546993 84547262 -115082888 + L1MEc LINE L1 34 313 -6083 1282 293 39 4 chr5 84547281 84547739 -115082411 + L1MEc LINE L1 408 881 -5515 4949 186 5 9 chr5 84549104 84550156 -115079994 + L1P LINE L1 1156 2202 -3944 21 0 0 0 chr5 84552142 84552163 -115077987 + AT_rich Low_complexity Low_complexity 1 21 0 259 247 111 25 chr5 84552296 84552377 -115077773 - L2 LINE L2 -36 3236 3149 1755 276 32 35 chr5 84552779 84553857 -115076293 - L1PA15 LINE L1 -328 5837 4760 725 209 7 7 chr5 84555206 84555354 -115074796 + AluSc SINE Alu 93 240 -69 180 0 0 0 chr5 84555379 84555399 -115074751 + (CACAA)n Simple_repeat Simple_repeat 4 23 0 23 0 0 0 chr5 84555489 84555512 -115074638 + AT_rich Low_complexity Low_complexity 1 23 0 4538 120 13 33 chr5 84555524 84556275 -115073875 - SVA Other Other -33 1353 618 15067 47 6 1 chr5 84556387 84558889 -115071261 - L1PA5 LINE L1 -126 6028 3516 1216 151 0 11 chr5 84558889 84559075 -115071075 - THE1B LTR MaLR -180 184 1 18527 93 14 3 chr5 84559765 84562344 -115067806 + L1P LINE L1 1 2605 -3541 1270 101 0 0 chr5 84562367 84562546 -115067604 + L1PA5 LINE L1 5976 6154 0 26 82 0 0 chr5 84563204 84563265 -115066885 + AT_rich Low_complexity Low_complexity 1 61 0 552 241 117 63 chr5 84563318 84563631 -115066519 - MLT1H1 LTR MaLR -227 363 52 759 189 38 0 chr5 84564516 84564675 -115065475 + L1MA10 LINE L1 6168 6332 -2 279 307 0 47 chr5 84564808 84564935 -115065215 + LTR67 LTR ERVL 427 547 -10 226 184 0 41 chr5 84565190 84565239 -115064911 + MER96B DNA MER1_type? 1 47 -370 * 330 209 0 0 chr5 84565232 84565299 -115064851 - MER96B DNA MER1_type? -108 67 1 231 319 153 0 chr5 84565383 84565540 -115064610 - MIR SINE MIR -28 234 54 4785 186 27 52 chr5 84565541 84565751 -115064399 + L1MD1 LINE L1 4567 4781 -1461 2124 98 35 0 chr5 84565751 84566036 -115064114 + AluSp SINE Alu 1 295 -18 4785 186 27 52 chr5 84566036 84567560 -115062590 + L1MD1 LINE L1 4781 6242 0 690 219 0 0 chr5 84567922 84568050 -115062100 - FLAM_A SINE Alu -5 128 1 289 261 45 11 chr5 84569078 84569166 -115060984 - MLT1H LTR MaLR 0 595 505 728 269 78 29 chr5 84569212 84569520 -115060630 - MLT1H LTR MaLR -188 361 39 882 222 97 35 chr5 84569794 84570177 -115059973 - L1MEc LINE L1 -4858 1357 951 602 208 20 0 chr5 84570177 84570278 -115059872 + MER58A DNA MER1_type 1 103 -4 1878 231 45 4 chr5 84570278 84570742 -115059408 - L1MEc LINE L1 -5506 890 408 857 268 56 15 chr5 84570762 84571031 -115059119 - L1MEc LINE L1 -6083 313 34 498 229 76 0 chr5 84571116 84571260 -115058890 + L1ME4a LINE L1 5507 5661 -460 30 27 0 0 chr5 84571270 84571307 -115058843 + AT_rich Low_complexity Low_complexity 1 37 0 211 267 0 0 chr5 84571600 84571645 -115058505 + (CA)n Simple_repeat Simple_repeat 2 46 0 269 245 78 0 chr5 84571651 84571753 -115058397 + L1ME4a LINE L1 6011 6120 -1 22 35 0 0 chr5 84573621 84573650 -115056500 + AT_rich Low_complexity Low_complexity 1 29 0 33 43 0 0 chr5 84573928 84573975 -115056175 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 0 chr5 84574273 84574296 -115055854 + AT_rich Low_complexity Low_complexity 1 23 0 317 109 0 0 chr5 84574320 84574366 -115055784 - MADE1 DNA Mariner -34 46 1 2320 83 0 3 chr5 84575021 84575323 -115054827 - AluSg1 SINE Alu -8 301 1 27 73 0 0 chr5 84576121 84576176 -115053974 + AT_rich Low_complexity Low_complexity 1 55 0 2392 88 7 0 chr5 84576718 84577025 -115053125 - AluSx SINE Alu -3 309 1 249 256 17 68 chr5 84577261 84577378 -115052772 + L3 LINE CR1 523 633 -944 625 291 60 92 chr5 84577387 84577755 -115052395 + L3 LINE CR1 821 1176 -401 926 250 115 50 chr5 84577910 84578274 -115051876 - MLT1J LTR MaLR -110 401 14 597 278 52 5 chr5 84578295 84578486 -115051664 + L3 LINE CR1 1309 1508 -69 265 312 112 8 chr5 84579816 84579941 -115050209 + MIR SINE MIR 66 203 -59 1713 256 61 16 chr5 84580434 84581015 -115049135 - L1ME3A LINE L1 -61 6109 5509 23 33 0 0 chr5 84583784 84583814 -115046336 + AT_rich Low_complexity Low_complexity 1 30 0 270 354 109 35 chr5 84584335 84584842 -115045308 - L2 LINE L2 -5 3267 2710 271 294 0 11 chr5 84584993 84585085 -115045065 + (TA)n Simple_repeat Simple_repeat 1 91 0 296 179 21 21 chr5 84585101 84585196 -115044954 + (TA)n Simple_repeat Simple_repeat 2 96 0 206 325 26 44 chr5 84585234 84585348 -115044802 - MIR SINE MIR -150 112 1 323 285 36 130 chr5 84585436 84585689 -115044461 - L2 LINE L2 -836 2478 2250 28 0 0 0 chr5 84586461 84586489 -115043661 + AT_rich Low_complexity Low_complexity 1 28 0 7486 29 0 0 chr5 84586489 84587506 -115042644 - L1PA5 LINE L1 -8 6146 5127 1469 265 90 25 chr5 84587512 84588243 -115041907 - HAL1b LINE L1 -225 1123 345 370 350 61 18 chr5 84590398 84590759 -115039391 - L1ME3A LINE L1 -759 5387 5052 867 214 5 38 chr5 84591531 84591741 -115038409 + MER3 DNA MER1_type 7 209 0 401 238 118 50 chr5 84591813 84592170 -115037980 + L1MC5 LINE L1 7537 7917 -44 207 283 38 0 chr5 84592234 84592287 -115037863 - MIR SINE MIR -174 88 34 251 275 110 18 chr5 84593784 84593893 -115036257 - L2 LINE L2 -62 3251 3133 185 294 118 0 chr5 84594925 84594976 -115035174 + L2 LINE L2 3134 3190 -82 189 0 0 0 chr5 84594976 84594997 -115035153 + (TG)n Simple_repeat Simple_repeat 2 22 0 250 237 10 21 chr5 84595026 84595123 -115035027 + L1MC4 LINE L1 6616 6711 -1331 542 336 113 12 chr5 84595244 84595571 -115034579 - L2 LINE L2 -896 2418 2059 2256 105 0 3 chr5 84596178 84596474 -115033676 - AluSq SINE Alu -18 295 1 279 0 0 0 chr5 84596698 84596729 -115033421 + (TG)n Simple_repeat Simple_repeat 2 32 0 4698 164 10 40 chr5 84598021 84598938 -115031212 - L1P LINE L1 -1845 4301 3413 3006 182 43 13 chr5 84598932 84600172 -115029978 + L1PA6 LINE L1 4849 6154 0 * 1675 163 7 33 chr5 84600285 84600585 -115029565 + AluJo SINE Alu 3 294 -18 552 68 0 0 chr5 84600712 84600785 -115029365 - AluY SINE Alu -12 300 228 1196 109 0 0 chr5 84600785 84600941 -115029209 - AluY SINE Alu -154 157 2 6759 83 18 3 chr5 84600941 84602646 -115027504 - L1PA7 LINE L1 -2 6467 4739 9024 104 17 30 chr5 84602746 84604267 -115025883 - L1PA7 LINE L1 -2886 3575 2074 7111 121 4 2 chr5 84604396 84605450 -115024700 - L1PA7 LINE L1 -5405 1056 1 1746 149 54 0 chr5 84605548 84605863 -115024287 + L1PA16 LINE L1 5827 6158 -8 281 278 9 153 chr5 84605980 84606208 -115023942 + MIR SINE MIR 19 212 -50 326 267 46 62 chr5 84606299 84606394 -115023756 + MIR SINE MIR 71 166 -96 1834 169 107 23 chr5 84606394 84606785 -115023365 - MSTA LTR MaLR -4 424 1 326 267 46 62 chr5 84606785 84606884 -115023266 + MIR SINE MIR 166 262 0 24 0 0 0 chr5 84606884 84606908 -115023242 + AT_rich Low_complexity Low_complexity 1 24 0 30470 116 16 64 chr5 84607026 84612888 -115017262 - L1P3 LINE L1 -574 5580 12 7298 26 6 300 chr5 84613135 84614897 -115015253 + SVA Other Other 142 1386 0 228 67 0 0 chr5 84615450 84615480 -115014670 + (CA)n Simple_repeat Simple_repeat 2 31 0 267 339 107 67 chr5 84615791 84616192 -115013958 - L2 LINE L2 -20 3252 2836 311 311 199 33 chr5 84616284 84616767 -115013383 - L2 LINE L2 -604 2710 2148 228 306 81 77 chr5 84617082 84617304 -115012846 - L2 LINE L2 -1429 1885 1663 4313 229 51 8 chr5 84617430 84618785 -115011365 - L1ME LINE L1 -2437 3643 2231 1968 270 76 64 chr5 84618812 84619366 -115010784 - L1ME LINE L1 -3909 2171 1625 2278 101 0 0 chr5 84619366 84619662 -115010488 - AluSx SINE Alu -16 296 1 1968 270 76 64 chr5 84619662 84620719 -115009431 - L1ME LINE L1 -4455 1625 544 679 111 82 22 chr5 84620719 84620820 -115009330 + L1PA13 LINE L1 6021 6133 -30 2150 138 0 3 chr5 84620820 84621124 -115009026 - AluSx SINE Alu -9 303 1 679 111 82 22 chr5 84621124 84621157 -115008993 + L1PA13 LINE L1 6133 6163 0 1968 270 76 64 chr5 84621157 84621683 -115008467 - L1ME LINE L1 -5536 544 26 790 243 61 14 chr5 84621691 84621905 -115008245 + MER58A DNA MER1_type 1 224 0 216 383 108 16 chr5 84622117 84622683 -115007467 + L2 LINE L2 1616 2233 -1081 315 259 152 45 chr5 84622721 84622833 -115007317 + MIR SINE MIR 53 176 -86 410 264 132 19 chr5 84622910 84623069 -115007081 + LTR16C LTR ERVL 315 491 0 825 372 230 24 chr5 84624745 84625366 -115004784 + Charlie7 DNA MER1_type 6 754 -1858 581 241 85 52 chr5 84625347 84625617 -115004533 + Charlie7 DNA MER1_type 2084 2362 -250 * 511 210 45 35 chr5 84626189 84626389 -115003761 + Charlie7 DNA MER1_type 2411 2612 0 538 244 41 8 chr5 84626436 84626559 -115003591 - L2 LINE L2 0 3313 3187 455 297 45 45 chr5 84626657 84626812 -115003338 + L2 LINE L2 3118 3272 0 859 166 113 0 chr5 84627427 84627578 -115002572 - FRAM SINE Alu -8 168 1 1440 194 27 0 chr5 84627578 84627871 -115002279 + MER58B DNA MER1_type 40 340 -1 555 233 244 0 chr5 84627936 84628108 -115002042 - MIR SINE MIR -29 233 20 775 178 178 22 chr5 84628931 84629116 -115001034 + MER58A DNA MER1_type 1 214 -10 253 294 300 0 chr5 84629139 84629299 -115000851 + L3b LINE CR1 1180 1387 -196 349 259 28 19 chr5 84629837 84629945 -115000205 + MER5A DNA MER1_type 35 143 -46 228 250 26 13 chr5 84629985 84630061 -115000089 + MIR SINE MIR 20 96 -166 22 80 0 0 chr5 84631106 84631156 -114998994 + AT_rich Low_complexity Low_complexity 1 50 0 1769 170 33 24 chr5 84631829 84632165 -114997985 - MER2 DNA MER2_type -6 339 1 23 33 0 0 chr5 84632190 84632220 -114997930 + AT_rich Low_complexity Low_complexity 1 30 0 240 363 21 26 chr5 84632298 84632366 -114997784 + MIR3 SINE MIR 16 83 -125 2436 185 75 4 chr5 84632366 84632874 -114997276 - MER44D DNA MER2_type -3 602 4 240 363 21 26 chr5 84632874 84632995 -114997155 + MIR3 SINE MIR 83 204 -4 486 249 11 17 chr5 84633025 84633206 -114996944 - L1MC5 LINE L1 -30 7931 7752 4910 158 71 17 chr5 84633323 84634283 -114995867 - L1MD2 LINE L1 0 6359 5348 351 0 0 0 chr5 84635170 84635209 -114994941 + (CA)n Simple_repeat Simple_repeat 2 40 0 853 295 43 59 chr5 84635643 84636205 -114993945 + L1ME LINE L1 5266 5818 -303 183 162 0 0 chr5 84636326 84636363 -114993787 + (TG)n Simple_repeat Simple_repeat 1 37 0 210 71 0 0 chr5 84640655 84640683 -114989467 + (CATGT)n Simple_repeat Simple_repeat 1 28 0 1987 96 45 10 chr5 84644139 84644430 -114985720 + AluSx SINE Alu 1 301 -11 26 64 0 0 chr5 84645187 84645234 -114984916 + AT_rich Low_complexity Low_complexity 1 47 0 193 295 146 70 chr5 84645299 84645614 -114984536 - L2 LINE L2 -1 3271 2933 579 288 36 45 chr5 84645745 84645967 -114984183 + MIR SINE MIR 5 224 -38 397 288 80 0 chr5 84645998 84646123 -114984027 - MIR SINE MIR -78 184 50 273 143 0 0 chr5 84647008 84647050 -114983100 + L2 LINE L2 3270 3311 -2 331 264 141 110 chr5 84647965 84648264 -114981886 - MARNA DNA Mariner -239 347 40 883 145 0 0 chr5 84648797 84648921 -114981229 - FLAM_C SINE Alu -19 124 1 724 91 83 8 chr5 84648936 84649057 -114981093 + L1MB8 LINE L1 6042 6171 -7 778 219 39 60 chr5 84649221 84649349 -114980801 + L2 LINE L2 3063 3185 -128 294 29 0 0 chr5 84649349 84649384 -114980766 + (CA)n Simple_repeat Simple_repeat 1 35 0 778 219 39 60 chr5 84649384 84649488 -114980662 + L2 LINE L2 3185 3290 -23 264 149 0 0 chr5 84650039 84650086 -114980064 + (CA)n Simple_repeat Simple_repeat 2 48 0 459 307 156 10 chr5 84650592 84650797 -114979353 - MIR SINE MIR -8 254 20 460 309 22 29 chr5 84652337 84652358 -114977792 + L2 LINE L2 3134 3154 -118 2339 131 3 5 chr5 84652358 84652725 -114977425 - MER47A DNA MER2_type 0 366 1 460 309 22 29 chr5 84652725 84652842 -114977308 + L2 LINE L2 3154 3271 -1 26 50 0 0 chr5 84653147 84653187 -114976963 + AT_rich Low_complexity Low_complexity 1 40 0 293 186 14 0 chr5 84655814 84655884 -114974266 - L1MC5 LINE L1 -186 7775 7705 2643 185 18 0 chr5 84655889 84656382 -114973768 + L1MD1 LINE L1 5688 6189 -53 734 181 0 8 chr5 84656384 84656511 -114973639 - AluJo SINE Alu -177 135 10 315 162 68 0 chr5 84656511 84656585 -114973565 + L1MD1 LINE L1 6164 6242 0 3154 169 66 68 chr5 84656602 84657585 -114972565 - L1MC5 LINE L1 -268 7693 6713 611 324 50 5 chr5 84657603 84657822 -114972328 + MIR SINE MIR 34 262 0 1243 209 38 0 chr5 84658061 84658324 -114971826 + ORSL DNA AcHobo 2 274 -1 203 239 23 80 chr5 84659158 84659246 -114970904 - L2 LINE L2 -538 2776 2694 1885 142 42 0 chr5 84660068 84660357 -114969793 - AluSx SINE Alu -11 301 1 764 198 0 0 chr5 84660502 84660628 -114969522 + FLAM_A SINE Alu 1 126 -7 2052 99 6 54 chr5 84660698 84661011 -114969139 + AluSx SINE Alu 1 298 -14 2351 77 0 29 chr5 84661050 84661363 -114968787 - AluSq SINE Alu -9 304 1 28 29 0 0 chr5 84661928 84661963 -114968187 + AT_rich Low_complexity Low_complexity 1 35 0 2119 139 0 3 chr5 84663091 84663400 -114966750 - AluSx SINE Alu -4 308 1 241 273 0 0 chr5 84663481 84663536 -114966614 + Charlie8 DNA MER1_type 2355 2409 -8 751 252 89 70 chr5 84663660 84663968 -114966182 - L1ME4a LINE L1 -2 6119 5818 2458 77 3 10 chr5 84663968 84664279 -114965871 + AluY SINE Alu 3 311 0 751 252 89 70 chr5 84664279 84664596 -114965554 - L1ME4a LINE L1 -303 5818 5482 672 291 46 5 chr5 84664948 84665144 -114965006 - MIR SINE MIR -55 207 4 567 258 56 75 chr5 84665939 84666191 -114963959 + MIR SINE MIR 16 262 0 23 33 0 0 chr5 84667237 84667267 -114962883 + AT_rich Low_complexity Low_complexity 1 30 0 4823 191 18 17 chr5 84669010 84670805 -114959345 - L1MB7 LINE L1 -178 6006 4214 534 129 0 0 chr5 84670908 84670993 -114959157 + (CCTA)n Simple_repeat Simple_repeat 2 86 0 507 56 0 0 chr5 84671180 84671251 -114958899 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 1433 166 19 39 chr5 84671766 84672025 -114958125 - AluSx SINE Alu -48 264 11 255 271 47 0 chr5 84673003 84673088 -114957062 - L1MB7 LINE L1 -3784 2362 2274 3169 212 66 20 chr5 84673142 84673929 -114956221 - L1ME1 LINE L1 -18 6082 5260 1137 139 0 22 chr5 84673939 84674119 -114956031 - FRAM SINE Alu -2 174 1 3603 231 70 29 chr5 84674144 84674340 -114955810 - L1ME1 LINE L1 -824 5256 5070 2052 112 18 0 chr5 84674340 84674660 -114955490 - AluSx SINE Alu 0 325 1 3603 231 70 29 chr5 84674660 84675640 -114954510 - L1ME1 LINE L1 -1010 5070 4030 1484 173 136 9 chr5 84675645 84675968 -114954182 + MLT2D LTR ERVL 3 366 -48 276 269 135 19 chr5 84675993 84676149 -114954001 - L1ME1 LINE L1 -5654 416 243 2279 105 3 0 chr5 84676422 84676717 -114953433 + AluSx SINE Alu 1 296 -16 267 294 66 7 chr5 84676900 84677036 -114953114 - L1ME1 LINE L1 -5925 145 2 317 236 79 47 chr5 84677096 84677223 -114952927 - L1MDa LINE L1 -3944 2596 2466 530 234 161 32 chr5 84677385 84677603 -114952547 - L2 LINE L2 -5 3308 3063 188 348 29 14 chr5 84677750 84677819 -114952331 - L2 LINE L2 -41 3231 3162 198 284 76 81 chr5 84678026 84678223 -114951927 - L2 LINE L2 -624 2690 2495 789 323 213 37 chr5 84678247 84679818 -114950332 - L2 LINE L2 -938 2376 530 2364 70 0 10 chr5 84679843 84680142 -114950008 + AluY SINE Alu 3 298 -13 1902 231 105 59 chr5 84680142 84681194 -114948956 - L1ME3A LINE L1 -8 6145 5044 953 193 62 0 chr5 84681205 84681397 -114948753 + MER3 DNA MER1_type 1 204 -5 1362 263 71 18 chr5 84681443 84682003 -114948147 - L1ME3A LINE L1 -1135 4994 4405 * 1721 278 59 16 chr5 84681987 84682663 -114947487 - L1ME3A LINE L1 -1976 4153 3449 348 298 104 24 chr5 84682701 84682756 -114947394 - L1ME3A LINE L1 -4923 1387 1338 1853 199 11 14 chr5 84682756 84683122 -114947028 + MLT1A1 LTR MaLR 1 365 0 348 298 104 24 chr5 84683122 84683703 -114946447 - L1ME3A LINE L1 -4972 1338 700 246 250 0 56 chr5 84683751 84683823 -114946327 - L1ME3A LINE L1 -5491 628 561 387 276 151 40 chr5 84684142 84684367 -114945783 - L2 LINE L2 -2769 545 296 278 211 13 40 chr5 84684406 84684482 -114945668 + L3 LINE CR1 1503 1576 -1 419 335 46 5 chr5 84684899 84685093 -114945057 + L2 LINE L2 202 403 -2911 945 303 164 30 chr5 84685181 84685924 -114944226 + L2 LINE L2 860 1702 -1612 1144 249 15 18 chr5 84685934 84686260 -114943890 + L1MC/D LINE L1 5328 5652 -2156 889 296 78 20 chr5 84686263 84686608 -114943542 + L2 LINE L2 2107 2471 -843 182 366 37 0 chr5 84687173 84687255 -114942895 + L2 LINE L2 3177 3261 -52 21 36 0 0 chr5 84688002 84688030 -114942120 + AT_rich Low_complexity Low_complexity 1 28 0 344 235 0 118 chr5 84688325 84688444 -114941706 + L2 LINE L2 3168 3272 0 1101 195 195 83 chr5 84688472 84688919 -114941231 - MLT1F1 LTR MaLR -8 559 63 24 32 0 0 chr5 84688984 84689015 -114941135 + AT_rich Low_complexity Low_complexity 1 31 0 2356 71 10 7 chr5 84689129 84689426 -114940724 + AluSq SINE Alu 1 298 -15 2371 89 0 0 chr5 84690250 84690542 -114939608 + AluSg SINE Alu 1 292 -18 480 297 34 7 chr5 84690634 84690782 -114939368 + MIR SINE MIR 5 156 -106 233 288 82 0 chr5 84690801 84690874 -114939276 - MIR SINE MIR -4 258 180 206 163 41 0 chr5 84691040 84691089 -114939061 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 219 158 0 0 chr5 84691129 84691167 -114938983 - MIR SINE MIR -54 208 171 1752 167 7 14 chr5 84691168 84691482 -114938668 + AluJo SINE Alu 1 312 0 323 43 0 22 chr5 84691528 84691574 -114938576 + (CA)n Simple_repeat Simple_repeat 2 46 0 500 321 88 50 chr5 84693316 84693655 -114936495 - L2 LINE L2 -1 3271 2920 2464 62 0 0 chr5 84693745 84694037 -114936113 - AluY SINE Alu -19 292 1 628 129 0 0 chr5 84694111 84694204 -114935946 - AluY SINE Alu -18 293 201 2018 141 13 3 chr5 84694228 84694532 -114935618 - AluSg SINE Alu -3 307 1 210 286 0 0 chr5 84694561 84694624 -114935526 + L2 LINE L2 2911 2973 -299 876 277 25 4 chr5 84695704 84695939 -114934211 + MIR SINE MIR 4 243 -19 30 0 0 0 chr5 84700397 84700427 -114929723 + AT_rich Low_complexity Low_complexity 1 30 0 916 263 97 21 chr5 84700496 84700785 -114929365 + Charlie2 DNA MER1_type 1 311 -2551 2073 132 7 3 chr5 84700847 84701151 -114928999 - AluSx SINE Alu -7 305 1 596 285 75 0 chr5 84701177 84701363 -114928787 + MIR SINE MIR 5 204 -58 1910 151 7 13 chr5 84701399 84701697 -114928453 + AluJb SINE Alu 1 296 -16 1387 197 160 29 chr5 84701741 84702290 -114927860 + Charlie2 DNA MER1_type 2242 2862 0 21 36 0 0 chr5 84702339 84702367 -114927783 + AT_rich Low_complexity Low_complexity 1 28 0 480 165 18 110 chr5 84703251 84703360 -114926790 - MER2 DNA MER2_type -246 99 1 492 304 87 54 chr5 84703750 84703927 -114926223 + L1ME4a LINE L1 5533 5703 -418 2445 72 0 7 chr5 84703927 84704233 -114925917 + AluSc SINE Alu 1 304 -5 492 304 87 54 chr5 84704233 84704424 -114925726 + L1ME4a LINE L1 5703 5913 -208 229 347 167 7 chr5 84705882 84706026 -114924124 + MIR SINE MIR 48 214 -48 444 333 101 46 chr5 84706033 84706508 -114923642 + L2 LINE L2 2476 2976 -338 1096 242 32 92 chr5 84707234 84707787 -114922363 - MER34 LTR ERV1 0 542 23 365 278 71 0 chr5 84708096 84708222 -114921928 + MIR SINE MIR 72 206 -56 247 296 120 19 chr5 84708733 84708841 -114921309 - MER5A DNA MER1_type -64 125 7 2309 98 3 0 chr5 84710837 84711133 -114919017 + AluSx SINE Alu 1 297 -15 387 208 57 57 chr5 84712039 84712145 -114918005 + L2 LINE L2 3190 3295 -18 190 387 16 0 chr5 84712177 84712239 -114917911 + L2 LINE L2 3210 3272 0 610 298 167 21 chr5 84712798 84713134 -114917016 - L2 LINE L2 -8 3264 2880 6346 117 21 8 chr5 84713159 84714279 -114915871 + L1MA4 LINE L1 5158 6293 -7 245 372 32 0 chr5 84714418 84714512 -114915638 + L2 LINE L2 3198 3294 -19 1611 272 63 37 chr5 84714621 84715243 -114914907 + L2 LINE L2 2449 3096 -217 1028 276 114 39 chr5 84715375 84717303 -114912847 + L1MEd LINE L1 576 2653 -3476 280 222 9 9 chr5 84717363 84717471 -114912679 + L1MEd LINE L1 3069 3176 -2953 397 234 212 0 chr5 84717835 84717972 -114912178 + MIR SINE MIR 64 229 -33 2186 127 3 0 chr5 84719547 84719846 -114910304 - AluSx SINE Alu -12 300 1 714 195 23 0 chr5 84719882 84720010 -114910140 + FLAM_C SINE Alu 1 131 -2 28 29 0 0 chr5 84720011 84720046 -114910104 + AT_rich Low_complexity Low_complexity 1 35 0 2297 242 60 18 chr5 84720059 84721365 -114908785 - L1M4c LINE L1 -4423 2715 1193 305 325 40 7 chr5 84721434 84721585 -114908565 - L1M4c LINE L1 -5668 1187 1032 308 335 27 27 chr5 84721936 84722157 -114907993 - L1M4c LINE L1 -6618 241 21 42 86 0 0 chr5 84722292 84722397 -114907753 + AT_rich Low_complexity Low_complexity 1 105 0 200 208 0 0 chr5 84722655 84722703 -114907447 + (TTTAA)n Simple_repeat Simple_repeat 3 50 0 878 262 36 24 chr5 84722975 84723227 -114906923 - MIR SINE MIR -2 260 6 893 238 15 15 chr5 84723792 84723994 -114906156 - MLT1A1 LTR MaLR 0 365 164 510 290 61 57 chr5 84724046 84724325 -114905825 + L2 LINE L2 3026 3305 -8 632 272 52 56 chr5 84724821 84725145 -114905005 + MER102b DNA MER1_type 11 333 -8 243 320 0 0 chr5 84725403 84725481 -114904669 + GA-rich Low_complexity Low_complexity 1 78 0 939 279 40 4 chr5 84726238 84726489 -114903661 - MIR SINE MIR 0 262 3 1770 129 80 49 chr5 84727068 84727393 -114902757 + MER1B DNA MER1_type 1 335 -2 1854 160 0 7 chr5 84727750 84728057 -114902093 + AluJb SINE Alu 1 305 -7 297 100 0 0 chr5 84728365 84728415 -114901735 + (TG)n Simple_repeat Simple_repeat 2 51 0 400 246 67 30 chr5 84728605 84728739 -114901411 + MIR SINE MIR 64 202 -60 200 247 169 0 chr5 84728983 84729060 -114901090 + MER5B DNA MER1_type 18 107 -71 400 247 12 0 chr5 84730106 84730191 -114899959 + MIR3 SINE MIR 82 167 -41 187 319 62 53 chr5 84730260 84730373 -114899777 + MIR SINE MIR 75 188 -74 354 208 13 13 chr5 84731842 84731919 -114898231 + MIR SINE MIR 74 150 -58 1859 172 3 10 chr5 84731961 84732264 -114897886 - AluJo SINE Alu -11 301 1 437 167 19 37 chr5 84732281 84732389 -114897761 - MER112 DNA MER1_type -91 169 64 271 154 31 0 chr5 84732389 84732454 -114897696 + (TA)n Simple_repeat Simple_repeat 1 67 0 228 288 15 0 chr5 84733184 84733250 -114896900 + L2 LINE L2 3206 3272 0 1509 202 74 16 chr5 84734025 84734391 -114895759 + MSTD LTR MaLR 8 394 -2 460 234 181 37 chr5 84734691 84735012 -114895138 - L1ME4a LINE L1 -37 6084 5718 373 272 78 10 chr5 84735013 84735116 -114895034 - L2 LINE L2 -8 3264 3155 2400 75 7 10 chr5 84735130 84735436 -114894714 + AluSx SINE Alu 1 305 -7 307 271 196 0 chr5 84735462 84735595 -114894555 - L1ME4a LINE L1 -437 5684 5526 253 259 65 9 chr5 84735883 84735991 -114894159 - L1MC5 LINE L1 -41 7920 7807 276 30 0 0 chr5 84736604 84736637 -114893513 + (CA)n Simple_repeat Simple_repeat 2 34 0 2301 107 0 3 chr5 84737210 84737520 -114892630 - AluSx SINE Alu -1 311 3 2376 76 0 0 chr5 84737557 84737847 -114892303 + AluY SINE Alu 1 290 -21 22 35 0 0 chr5 84739461 84739490 -114890660 + AT_rich Low_complexity Low_complexity 1 29 0 2522 235 126 17 chr5 84739494 84740557 -114889593 - L1MD2 LINE L1 -14 6345 5175 908 193 31 0 chr5 84740561 84740722 -114889428 - FRAM SINE Alu 0 166 1 3615 71 31 2 chr5 84740749 84741225 -114888925 - LTR2B LTR ERV1 0 490 1 23245 116 9 4 chr5 84741225 84744750 -114885400 - Harlequin LTR ERV1 0 6896 3352 6183 53 36 24 chr5 84744749 84745740 -114884410 - Harlequin LTR ERV1 -4322 2574 1572 * 4403 77 8 29 chr5 84745725 84746379 -114883771 - Harlequin LTR ERV1 -5995 901 262 * 2563 86 5 18 chr5 84746374 84746759 -114883391 - Harlequin LTR ERV1 -6516 380 1 * 3446 65 67 2 chr5 84746759 84747219 -114882931 - LTR2B LTR ERV1 0 490 1 595 139 0 56 chr5 84747230 84747338 -114882812 - AluJ/FLAM SINE Alu -210 102 1 817 223 117 35 chr5 84747346 84747713 -114882437 - L1MD2 LINE L1 -966 5180 4784 236 268 56 61 chr5 84748410 84748609 -114881541 - L2 LINE L2 -326 2946 2748 507 208 48 24 chr5 84750212 84750337 -114879813 + FLAM_A SINE Alu 5 132 -1 2032 114 23 7 chr5 84750380 84750679 -114879471 + AluSx SINE Alu 1 304 -8 246 261 29 0 chr5 84750715 84750784 -114879366 - MER116 DNA Mariner -7 73 3 220 366 129 0 chr5 84752303 84752396 -114877754 + MIR SINE MIR 2 106 -156 2200 113 0 0 chr5 84752404 84752715 -114877435 - AluSx SINE Alu -1 311 1 527 265 41 71 chr5 84752780 84753074 -114877076 - L2 LINE L2 0 3313 3029 3117 277 153 25 chr5 84753083 84754507 -114875643 - L2 LINE L2 -399 2915 1309 612 300 38 25 chr5 84754532 84754769 -114875381 - MIR SINE MIR -21 241 2 322 294 143 0 chr5 84754774 84754893 -114875257 - L2 LINE L2 -2001 1313 1178 1626 134 52 30 chr5 84754897 84755080 -114875070 + L1MA8 LINE L1 5900 6078 -213 2348 149 45 17 chr5 84755080 84755502 -114874648 + Tigger2a DNA MER2_type 1 434 0 1626 134 52 30 chr5 84755502 84755684 -114874466 + L1MA8 LINE L1 6078 6273 -18 31 0 0 0 chr5 84755688 84755719 -114874431 + AT_rich Low_complexity Low_complexity 1 31 0 336 302 96 27 chr5 84755747 84756047 -114874103 + L1M4 LINE L1 4947 5225 -921 2376 93 0 0 chr5 84756047 84756349 -114873801 + AluSx SINE Alu 1 302 -10 336 302 96 27 chr5 84756349 84756416 -114873734 + L1M4 LINE L1 5220 5341 -800 2176 114 0 35 chr5 84756416 84756731 -114873419 + AluSx SINE Alu 1 304 -8 607 266 40 40 chr5 84756834 84757131 -114873019 - L1M4 LINE L1 -2510 3636 3340 242 116 23 0 chr5 84757134 84757177 -114872973 + (TA)n Simple_repeat Simple_repeat 1 44 0 985 224 67 31 chr5 84757177 84757447 -114872703 - L1M4 LINE L1 -2634 3512 3222 1844 181 143 34 chr5 84757447 84757687 -114872463 - MLT2B1 LTR ERVL 0 520 308 180 0 0 0 chr5 84757687 84757707 -114872443 + (AGATG)n Simple_repeat Simple_repeat 1 20 0 1844 181 143 34 chr5 84757707 84757935 -114872215 - MLT2B1 LTR ERVL -212 308 1 985 224 67 31 chr5 84757935 84758052 -114872098 - L1M4 LINE L1 -2924 3222 3111 4703 150 41 13 chr5 84758212 84759086 -114871064 + MER54A LTR ERVL 3 901 0 749 201 47 0 chr5 84759087 84759301 -114870849 - L1M4 LINE L1 -3090 3056 2833 437 252 0 0 chr5 84759303 84759414 -114870736 - L1M4 LINE L1 -3432 2714 2604 684 323 81 21 chr5 84759778 84760159 -114869991 - L2 LINE L2 -389 2925 2522 484 227 40 33 chr5 84760222 84760372 -114869778 - MIR SINE MIR -8 254 104 2432 66 3 7 chr5 84761531 84761834 -114868316 - AluSg SINE Alu -8 302 1 308 313 39 67 chr5 84762101 84762280 -114867870 + L3b LINE CR1 1289 1462 -121 23 0 0 0 chr5 84762447 84762470 -114867680 + AT_rich Low_complexity Low_complexity 1 23 0 188 214 18 0 chr5 84762562 84762618 -114867532 + A-rich Low_complexity Low_complexity 2 58 0 2240 113 0 10 chr5 84762946 84763256 -114866894 + AluSx SINE Alu 1 307 -5 192 341 187 0 chr5 84763703 84763826 -114866324 + L2 LINE L2 3127 3272 0 380 282 124 48 chr5 84764291 84764500 -114865650 - L2 LINE L2 0 3313 3089 304 297 36 57 chr5 84764510 84764702 -114865448 - L2 LINE L2 -356 2958 2771 2154 185 47 14 chr5 84765040 84765532 -114864618 + LTR40a LTR ERVL 12 519 0 2377 84 3 3 chr5 84765843 84766152 -114863998 - AluSg SINE Alu -1 309 1 356 201 11 21 chr5 84766340 84766434 -114863716 + MER33 DNA MER1_type 1 79 -88 809 159 0 8 chr5 84766439 84766565 -114863585 + FLAM_C SINE Alu 7 131 -12 888 156 58 13 chr5 84766577 84766802 -114863348 + MER33 DNA MER1_type 129 363 0 446 271 155 39 chr5 84766818 84766973 -114863177 + MER5A DNA MER1_type 9 181 -8 738 200 16 5 chr5 84766995 84767180 -114862970 + MER53 DNA DNA 1 187 -2 222 287 21 21 chr5 84767241 84767335 -114862815 + GA-rich Low_complexity Low_complexity 6 99 0 2273 87 19 10 chr5 84767870 84768179 -114861971 + AluSx SINE Alu 1 312 0 414 239 141 38 chr5 84768180 84768364 -114861786 - MIR SINE MIR -54 208 6 722 289 97 32 chr5 84770326 84770769 -114859381 - L2 LINE L2 0 3306 2836 347 216 200 24 chr5 84771063 84771188 -114858962 - HAL1 LINE L1 -7 2500 2354 563 271 32 69 chr5 84771228 84771512 -114858638 - MLT1I LTR MaLR -38 371 133 4426 155 91 17 chr5 84771512 84772279 -114857871 - LTR1B LTR ERV1 0 826 3 563 271 32 69 chr5 84772279 84772345 -114857805 - MLT1I LTR MaLR -276 133 66 782 240 160 68 chr5 84772542 84773055 -114857095 - HAL1 LINE L1 -303 2204 1645 2602 240 82 28 chr5 84773135 84773574 -114856576 + L1ME1 LINE L1 4978 5392 -774 3355 27 21 0 chr5 84773574 84773971 -114856179 + L1PA3 LINE L1 5771 6175 0 2602 240 82 28 chr5 84773971 84774430 -114855720 + L1ME1 LINE L1 5392 5946 -220 2472 81 3 3 chr5 84774430 84774738 -114855412 + AluSp SINE Alu 1 308 -5 2602 240 82 28 chr5 84774738 84774967 -114855183 + L1ME1 LINE L1 5946 6161 -5 643 240 96 37 chr5 84775411 84775682 -114854468 + L1MC5 LINE L1 7640 7926 -35 * 657 266 77 18 chr5 84775676 84775962 -114854188 + L1ME4a LINE L1 5601 5903 -218 266 229 31 62 chr5 84776232 84776328 -114853822 + L2 LINE L2 3219 3311 -2 1988 138 0 0 chr5 84776358 84776676 -114853474 + AluSx SINE Alu 1 318 0 21 36 0 0 chr5 84777379 84777407 -114852743 + AT_rich Low_complexity Low_complexity 1 28 0 1549 156 39 4 chr5 84777471 84777727 -114852423 - L1PA16 LINE L1 -11 6155 5891 384 183 0 0 chr5 84777924 84777995 -114852155 - L1MC2 LINE L1 -216 6128 6058 2220 91 7 14 chr5 84778505 84778801 -114851349 + AluSx SINE Alu 1 294 -18 435 19 0 0 chr5 84779456 84779508 -114850642 + (TG)n Simple_repeat Simple_repeat 2 53 0 231 36 0 0 chr5 84779985 84780013 -114850137 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 2196 96 0 4 chr5 84780014 84780294 -114849856 - AluSq SINE Alu -32 281 3 236 239 220 18 chr5 84780357 84780466 -114849684 + MIR SINE MIR 23 153 -55 207 307 27 0 chr5 84780492 84780567 -114849583 - MIR SINE MIR -18 244 168 2123 149 0 0 chr5 84781530 84781838 -114848312 + AluSx SINE Alu 1 308 -4 2077 232 24 30 chr5 84781845 84782418 -114847732 - L1ME1 LINE L1 -117 6049 5480 288 189 45 99 chr5 84782629 84782740 -114847410 - LTR68 LTR ERV1 -108 632 528 301 306 64 40 chr5 84782910 84783083 -114847067 - LTR68 LTR ERV1 -561 179 3 982 226 38 28 chr5 84783101 84783516 -114846634 - L1ME1 LINE L1 -697 5473 5055 193 146 73 91 chr5 84783736 84783791 -114846359 - L2 LINE L2 0 3272 3219 375 242 40 94 chr5 84784431 84784580 -114845570 - MER103 DNA DNA -2 164 24 213 39 0 0 chr5 84784807 84784833 -114845317 + (TTA)n Simple_repeat Simple_repeat 2 27 0 767 266 59 49 chr5 84784852 84785295 -114844855 + LTR16C LTR ERVL 1 491 0 307 267 35 0 chr5 84785313 84785429 -114844721 - L1ME4a LINE L1 -38 6083 5964 463 292 86 0 chr5 84785524 84785678 -114844472 + MIR SINE MIR 37 204 -58 306 218 236 9 chr5 84787097 84787207 -114842943 + MIR SINE MIR 2 136 -126 233 347 14 14 chr5 84787412 84787484 -114842666 - MIR SINE MIR -160 102 31 279 0 0 0 chr5 84787491 84787522 -114842628 + (TG)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr5 84787522 84787550 -114842600 + AT_rich Low_complexity Low_complexity 1 28 0 222 191 0 0 chr5 84787550 84787597 -114842553 + (TATG)n Simple_repeat Simple_repeat 2 48 0 4087 150 10 71 chr5 84787770 84788179 -114841971 + L1MB3 LINE L1 5444 5784 -399 1721 122 35 42 chr5 84788179 84788467 -114841683 + AluJb SINE Alu 5 290 -22 4087 150 10 71 chr5 84788467 84788844 -114841306 + L1MB3 LINE L1 5784 6182 -1 377 270 70 0 chr5 84789408 84789508 -114840642 - Charlie8 DNA MER1_type -2197 220 114 2438 98 0 0 chr5 84789668 84789975 -114840175 + AluSq SINE Alu 1 307 -6 350 62 0 0 chr5 84790559 84790607 -114839543 - MADE1 DNA Mariner 0 80 33 653 260 34 11 chr5 84790733 84790910 -114839240 + MIR SINE MIR 22 202 -60 522 172 0 0 chr5 84792067 84792166 -114837984 + GA-rich Low_complexity Low_complexity 2 100 0 251 290 14 14 chr5 84792872 84792941 -114837209 + LTR67 LTR ERVL 131 199 -358 363 262 83 14 chr5 84793094 84793239 -114836911 + LTR67 LTR ERVL 400 554 -3 449 282 48 0 chr5 84793448 84793572 -114836578 + MER94 DNA DNA 2 131 -3 1630 210 0 13 chr5 84793824 84794129 -114836021 + AluJo SINE Alu 1 301 -11 1910 150 10 25 chr5 84794131 84794445 -114835705 + AluJo SINE Alu 1 309 -3 621 305 44 73 chr5 84794731 84795318 -114834832 + ERVL LTR ERVL 994 1563 -4201 695 316 48 45 chr5 84796320 84796401 -114833749 - L2 LINE L2 -1002 2312 2233 1572 297 74 2 chr5 84796401 84796859 -114833291 + LTR16C LTR ERVL 1 491 0 695 316 48 45 chr5 84796859 84797195 -114832955 - L2 LINE L2 -1081 2233 1894 592 293 68 45 chr5 84797207 84797562 -114832588 + LTR33 LTR ERVL 159 521 0 189 0 0 0 chr5 84799325 84799346 -114830804 + (T)n Simple_repeat Simple_repeat 1 21 0 490 215 74 61 chr5 84800247 84800410 -114829740 - MER69 DNA AcHobo 0 2526 2362 379 247 134 0 chr5 84800405 84800502 -114829648 - MER69 DNA AcHobo -1063 163 54 * 270 0 0 0 chr5 84800503 84800533 -114829617 + (TG)n Simple_repeat Simple_repeat 1 30 0 3777 129 54 5 chr5 84800538 84801128 -114829022 - L1PA16 LINE L1 -2 6164 5546 602 240 19 26 chr5 84801131 84801285 -114828865 - MLT2F LTR ERVL -60 603 451 837 150 19 56 chr5 84801285 84801445 -114828705 - MER20 DNA MER1_type -65 154 1 1256 233 8 8 chr5 84801452 84801714 -114828436 - ERVL LTR ERVL -744 5020 4759 3210 115 69 4 chr5 84802077 84802557 -114827593 + MER9 LTR ERVK 1 511 0 358 250 0 0 chr5 84803365 84803445 -114826705 - MER116 DNA Mariner 0 80 1 24 0 0 0 chr5 84806332 84806356 -114823794 + AT_rich Low_complexity Low_complexity 1 24 0 348 304 96 9 chr5 84807679 84807794 -114822356 - L2 LINE L2 -2 3270 3146 2238 121 0 0 chr5 84808983 84809290 -114820860 - AluSx SINE Alu -5 307 1 303 303 78 28 chr5 84809331 84809473 -114820677 - MIR3 SINE MIR -57 151 3 244 283 0 0 chr5 84810623 84810676 -114819474 + polypyrimidine Low_complexity Low_complexity 3 55 0 2128 154 0 0 chr5 84811272 84811578 -114818572 - AluSx SINE Alu -6 306 1 26 0 0 0 chr5 84811727 84811753 -114818397 + AT_rich Low_complexity Low_complexity 1 26 0 1915 158 0 16 chr5 84811846 84812149 -114818001 + AluJb SINE Alu 1 298 -14 1031 201 0 0 chr5 84812784 84812963 -114817187 + AluJo SINE Alu 121 299 -13 280 294 37 46 chr5 84814264 84814373 -114815777 + L2 LINE L2 3161 3268 -4 43 47 0 0 chr5 84815800 84815864 -114814286 + AT_rich Low_complexity Low_complexity 1 64 0 255 267 17 0 chr5 84816331 84816391 -114813759 - L2 LINE L2 -1 3271 3211 369 0 0 0 chr5 84816573 84816614 -114813536 + (TG)n Simple_repeat Simple_repeat 1 41 0 588 363 75 32 chr5 84816746 84816768 -114813382 + L2 LINE L2 2174 2194 -1120 2338 69 6 41 chr5 84816768 84817088 -114813062 - AluY SINE Alu -2 309 1 588 363 75 32 chr5 84817088 84817627 -114812523 + L2 LINE L2 2194 2759 -555 247 284 74 0 chr5 84817641 84817736 -114812414 - MER112 DNA MER1_type -11 249 148 815 170 0 14 chr5 84817759 84817900 -114812250 - FLAM_C SINE Alu -3 140 2 252 200 107 0 chr5 84817919 84817994 -114812156 - MER112 DNA MER1_type -137 123 41 184 300 107 40 chr5 84818443 84818593 -114811557 + L2 LINE L2 2887 3046 -226 2153 121 10 3 chr5 84819367 84819674 -114810476 + AluSq SINE Alu 1 309 -4 494 306 88 6 chr5 84819806 84819976 -114810174 - MIR SINE MIR -51 211 28 1914 161 0 3 chr5 84821462 84821760 -114808390 - AluJb SINE Alu -13 299 3 187 391 36 22 chr5 84826390 84826528 -114803622 - L2 LINE L2 0 3272 3133 1921 89 97 0 chr5 84827629 84827898 -114802252 + AluSc SINE Alu 1 295 -14 214 167 0 0 chr5 84829465 84829501 -114800649 + (TG)n Simple_repeat Simple_repeat 1 36 0 485 308 106 10 chr5 84830199 84830407 -114799743 - MIR SINE MIR -10 252 25 300 273 31 47 chr5 84831045 84831173 -114798977 + MIR3 SINE MIR 13 138 -70 338 284 49 65 chr5 84831250 84831435 -114798715 + MIR SINE MIR 16 192 -63 472 195 117 39 chr5 84831551 84831705 -114798445 + MER117 DNA MER1_type 1 166 -31 285 29 0 0 chr5 84832860 84832894 -114797256 + (CA)n Simple_repeat Simple_repeat 2 35 0 204 97 0 0 chr5 84833240 84833271 -114796879 + (CA)n Simple_repeat Simple_repeat 2 32 0 297 100 0 0 chr5 84834042 84834092 -114796058 + (TC)n Simple_repeat Simple_repeat 1 50 0 207 282 0 56 chr5 84835072 84835143 -114795007 - L2 LINE L2 -8 3305 3239 698 224 18 24 chr5 84835423 84835593 -114794557 + MIR SINE MIR 63 231 -31 1210 295 192 40 chr5 84836170 84837005 -114793145 + L3 LINE CR1 332 1293 -284 834 293 29 8 chr5 84837160 84837399 -114792751 + MIR SINE MIR 16 259 -3 414 301 73 15 chr5 84838342 84838478 -114791672 + MIR3 SINE MIR 3 146 -62 822 301 37 37 chr5 84839060 84839439 -114790711 - LTR16A1 LTR ERVL 0 457 79 712 247 36 10 chr5 84839439 84839633 -114790517 - MER63A DNA MER1_type -3 207 9 285 250 25 0 chr5 84839641 84839721 -114790429 - LTR16A1 LTR ERVL -375 82 1 387 185 62 85 chr5 84840118 84840248 -114789902 - L1MC5 LINE L1 -47 7914 7788 1672 135 21 90 chr5 84840319 84840446 -114789704 + AluJb SINE Alu 1 135 -177 2193 110 3 0 chr5 84840446 84840754 -114789396 + AluSg SINE Alu 1 309 -1 1672 135 21 90 chr5 84840754 84840959 -114789191 + AluJb SINE Alu 135 310 -2 2388 93 0 6 chr5 84841888 84842199 -114787951 - AluSc SINE Alu 0 309 1 198 118 0 0 chr5 84842633 84842667 -114787483 + (T)n Simple_repeat Simple_repeat 1 34 0 17386 20 3 0 chr5 84842671 84845440 -114784710 - L1HS LINE L1 0 6155 3379 1538 146 101 0 chr5 84845593 84845861 -114784289 - L1MC1 LINE L1 -2 6331 6037 289 265 69 10 chr5 84846812 84846914 -114783236 + MIR SINE MIR 155 262 0 27 0 0 0 chr5 84846982 84847009 -114783141 + AT_rich Low_complexity Low_complexity 1 27 0 826 101 9 0 chr5 84847037 84847146 -114783004 - AluSg SINE Alu -13 299 190 1012 94 0 0 chr5 84847147 84847274 -114782876 - AluSg SINE Alu -183 127 1 2528 73 0 0 chr5 84847285 84847588 -114782562 - AluY SINE Alu -8 303 1 246 276 181 0 chr5 84847828 84847933 -114782217 - L2 LINE L2 -1 3271 3148 1089 165 15 4 chr5 84848115 84848446 -114781704 - MER93b LTR ERV1 -6 367 1 182 176 29 0 chr5 84848932 84848966 -114781184 + L2 LINE L2 3263 3297 -16 21 36 0 0 chr5 84849715 84849743 -114780407 + AT_rich Low_complexity Low_complexity 1 28 0 191 247 59 71 chr5 84850374 84850459 -114779691 + L2 LINE L2 126 209 -3105 321 26 0 0 chr5 84850666 84850704 -114779446 + (TG)n Simple_repeat Simple_repeat 1 38 0 388 296 133 51 chr5 84851778 84852138 -114778012 - MLT1I LTR MaLR -27 423 39 2295 131 73 18 chr5 84852298 84852641 -114777509 - THE1B LTR MaLR -2 362 1 12607 91 9 1 chr5 84852641 84854209 -114775941 - THE1B-int LTR MaLR 0 1580 1 2064 160 73 18 chr5 84854211 84854554 -114775596 - THE1B LTR MaLR -2 362 1 553 215 68 76 chr5 84855506 84855634 -114774516 + MIR SINE MIR 36 161 -101 1581 187 28 7 chr5 84855634 84855923 -114774227 + AluJo SINE Alu 2 296 -16 553 215 68 76 chr5 84855923 84856023 -114774127 + MIR SINE MIR 161 260 -2 364 285 6 0 chr5 84856475 84856577 -114773573 - MER5B DNA MER1_type -16 162 69 293 211 156 39 chr5 84856675 84856803 -114773347 - MLT1I LTR MaLR -4 405 263 299 268 41 31 chr5 84856813 84856910 -114773240 - MLT1I LTR MaLR -266 143 46 182 278 0 0 chr5 84857066 84857102 -114773048 - MIR3 SINE MIR -29 179 144 190 83 0 0 chr5 84858327 84858351 -114771799 + MER5A DNA MER1_type 2 25 -164 204 222 48 32 chr5 84858911 84858974 -114771176 - L3b LINE CR1 -232 1351 1288 383 260 106 74 chr5 84858974 84859324 -114770826 - MLT1K LTR MaLR -7 581 221 212 281 53 0 chr5 84859546 84859603 -114770547 + L2 LINE L2 3153 3212 -60 279 0 0 0 chr5 84862218 84862249 -114767901 + (T)n Simple_repeat Simple_repeat 1 31 0 551 274 59 51 chr5 84862995 84863232 -114766918 - MIR SINE MIR -17 245 7 23 0 0 0 chr5 84863375 84863398 -114766752 + AT_rich Low_complexity Low_complexity 1 23 0 182 229 21 21 chr5 84864189 84864237 -114765913 - L2 LINE L2 -6 3266 3219 251 387 34 17 chr5 84864660 84864779 -114765371 - L2 LINE L2 -5 3267 3147 1775 103 0 0 chr5 84866100 84866334 -114763816 + AluY SINE Alu 77 310 -1 220 179 18 18 chr5 84866719 84866775 -114763375 + (TA)n Simple_repeat Simple_repeat 2 57 0 340 298 31 52 chr5 84866783 84866974 -114763176 + HAL1 LINE L1 922 1108 -1399 1275 261 120 21 chr5 84866982 84867557 -114762593 + HAL1 LINE L1 1154 1785 -722 259 213 16 0 chr5 84867935 84867996 -114762154 + HAL1 LINE L1 2078 2139 -368 279 313 56 19 chr5 84868062 84868222 -114761928 + HAL1b LINE L1 746 911 -437 389 130 14 0 chr5 84868817 84868886 -114761264 - L1ME4a LINE L1 0 6121 6052 297 269 157 0 chr5 84869207 84869315 -114760835 - MER5A DNA MER1_type -6 183 59 513 200 168 0 chr5 84869320 84869452 -114760698 + MER5A DNA MER1_type 4 160 -29 600 235 4 29 chr5 84871204 84871401 -114758749 + L1ME1 LINE L1 5974 6177 -1 180 227 91 0 chr5 84871712 84871756 -114758394 - L2 LINE L2 0 3313 3266 504 208 68 102 chr5 84872461 84872726 -114757424 + MER112 DNA MER1_type 1 256 0 1081 242 160 18 chr5 84873183 84873526 -114756624 + LTR16A1 LTR ERVL 66 457 0 232 217 178 25 chr5 84873531 84873662 -114756488 - MIR SINE MIR -45 217 64 439 350 28 0 chr5 84874411 84874591 -114755559 + MIR SINE MIR 70 254 -8 247 308 56 9 chr5 84874926 84875033 -114755117 + LTR67 LTR ERVL 429 540 -17 186 296 197 0 chr5 84875209 84875280 -114754870 + L2 LINE L2 3229 3313 0 552 259 31 6 chr5 84875388 84875550 -114754600 - MIR SINE MIR -45 217 52 750 274 177 9 chr5 84875706 84876045 -114754105 - MARNA DNA Mariner -17 569 174 477 327 77 57 chr5 84876085 84876320 -114753830 - L2 LINE L2 -37 3235 2989 1057 201 18 23 chr5 84876320 84876539 -114753611 - MER20 DNA MER1_type -1 218 1 477 327 77 57 chr5 84876539 84876652 -114753498 - L2 LINE L2 -283 2989 2880 307 169 46 0 chr5 84877078 84877143 -114753007 - MER20 DNA MER1_type -57 162 95 285 246 115 25 chr5 84877870 84877992 -114752158 + L2 LINE L2 3173 3305 -8 2273 151 13 39 chr5 84878011 84878395 -114751755 - MSTB1 LTR MaLR -13 419 46 219 366 45 18 chr5 84879578 84879690 -114750460 + L2 LINE L2 3139 3253 -19 864 228 0 26 chr5 84880639 84880828 -114749322 + MIR SINE MIR 78 261 -1 977 209 70 21 chr5 84880839 84881126 -114749024 + MER46C DNA MER2_type 23 323 -15 189 182 0 0 chr5 84881280 84881313 -114748837 - L2 LINE L2 -16 3297 3265 362 265 20 82 chr5 84881440 84881587 -114748563 - MIR SINE MIR -122 140 3 3034 202 79 41 chr5 84881856 84882777 -114747373 - L1ME2 LINE L1 -9 6155 5207 2091 138 76 19 chr5 84883803 84884172 -114745978 + MLT1B LTR MaLR 1 390 0 1939 158 0 0 chr5 84884367 84884677 -114745473 + AluSx SINE Alu 1 310 -2 1896 147 11 0 chr5 84884792 84885078 -114745072 - AluJb SINE Alu -23 289 1 424 196 109 43 chr5 84885147 84885285 -114744865 + MIR SINE MIR 89 235 -27 464 326 51 0 chr5 84886583 84886721 -114743429 + L2 LINE L2 3116 3260 -12 411 263 26 64 chr5 84887843 84887999 -114742151 + MIR SINE MIR 57 206 -56 219 69 0 0 chr5 84888046 84888075 -114742075 + (T)n Simple_repeat Simple_repeat 1 29 0 1803 266 115 15 chr5 84888141 84888682 -114741468 - MLT2F LTR ERVL -2 661 67 578 187 20 22 chr5 84888698 84888901 -114741249 - MER45C DNA AcHobo -8 945 711 958 261 67 12 chr5 84888978 84889231 -114740919 - MER45C DNA AcHobo -686 267 1 379 175 0 0 chr5 84889237 84889300 -114740850 - MLT2F LTR ERVL -600 63 1 1898 152 10 26 chr5 84889487 84889796 -114740354 - AluSx SINE Alu -8 304 1 1590 204 133 31 chr5 84889996 84890202 -114739948 + LTR40c LTR ERVL 1 185 -280 2156 164 54 3 chr5 84890202 84890573 -114739577 - MLT1B LTR MaLR 0 390 1 1590 204 133 31 chr5 84890573 84890788 -114739362 + LTR40c LTR ERVL 185 465 0 2145 156 92 45 chr5 84891032 84891500 -114738650 - LTR2B LTR ERV1 0 490 1 2129 188 38 0 chr5 84892543 84892915 -114737235 + MLT1B LTR MaLR 1 386 -4 189 0 0 0 chr5 84892918 84892939 -114737211 + (CCCCCA)n Simple_repeat Simple_repeat 1 21 0 1984 189 98 30 chr5 84894069 84894528 -114735622 + LTR2B LTR ERV1 1 490 0 2636 32 0 16 chr5 84896647 84896956 -114733194 - AluY SINE Alu -7 304 1 1688 160 27 17 chr5 84898359 84898653 -114731497 - MSTA LTR MaLR 0 428 132 2414 75 3 0 chr5 84898661 84898955 -114731195 + AluSp SINE Alu 11 305 -8 411 98 0 0 chr5 84898955 84899016 -114731134 + (GGA)n Simple_repeat Simple_repeat 1 61 0 1129 89 0 0 chr5 84899020 84899166 -114730984 - MSTA LTR MaLR -282 146 1 210 323 111 20 chr5 84899351 84899450 -114730700 + MIR SINE MIR 21 128 -80 225 200 22 0 chr5 84899453 84899498 -114730652 - Charlie6 DNA MER1_type -3273 227 182 194 317 151 16 chr5 84899603 84899789 -114730361 + MIR SINE MIR 47 257 -5 198 0 0 0 chr5 84900692 84900714 -114729436 + (A)n Simple_repeat Simple_repeat 1 22 0 279 79 0 0 chr5 84902299 84902337 -114727813 + (CAT)n Simple_repeat Simple_repeat 2 39 0 190 313 54 68 chr5 84902396 84902543 -114727607 - MIR SINE MIR -111 151 7 43561 33 23 1 chr5 84902842 84908865 -114721285 - L1PA2 LINE L1 0 6155 1 548 296 51 14 chr5 84909145 84909537 -114720613 - L1MEc LINE L1 -3669 2460 2081 296 111 0 0 chr5 84909605 84909644 -114720506 - MLT2B1 LTR ERVL -2 518 479 234 91 0 0 chr5 84909644 84909677 -114720473 + (TG)n Simple_repeat Simple_repeat 2 34 0 204 40 0 0 chr5 84909709 84909734 -114720416 + (TG)n Simple_repeat Simple_repeat 2 26 0 330 51 0 0 chr5 84909734 84909773 -114720377 + MLT2D LTR ERVL 319 357 -57 186 43 0 0 chr5 84909773 84909796 -114720354 + (TC)n Simple_repeat Simple_repeat 2 24 0 290 174 0 0 chr5 84909803 84909849 -114720301 + MLT2D LTR ERVL 316 361 -53 312 125 0 25 chr5 84909913 84909976 -114720174 + MLT2C1 LTR ERVL 299 375 -39 1500 161 94 7 chr5 84909986 84910285 -114719865 - MLT2D LTR ERVL -89 325 1 256 275 68 50 chr5 84910653 84910875 -114719275 - L1MEc LINE L1 -4912 1398 1173 3733 96 20 8 chr5 84910882 84911383 -114718767 - L1PA10 LINE L1 -15 6153 5647 1511 80 0 0 chr5 84911383 84911571 -114718579 + L1PA10 LINE L1 5445 5632 -536 * 1645 260 102 65 chr5 84911561 84912601 -114717549 - L1MEc LINE L1 -4963 1156 79 2363 100 0 0 chr5 84912867 84913176 -114716974 + AluSg1 SINE Alu 1 309 0 1777 99 0 0 chr5 84913945 84914166 -114715984 - AluSq SINE Alu -22 291 71 417 244 163 31 chr5 84914396 84914556 -114715594 + MLT1J LTR MaLR 36 216 -295 329 301 115 39 chr5 84914989 84915301 -114714849 - L2 LINE L2 -338 2976 2641 2164 98 3 0 chr5 84916559 84916845 -114713305 + AluSg SINE Alu 23 309 -1 287 258 113 0 chr5 84918139 84918236 -114711914 - L2 LINE L2 -1051 2263 2156 216 158 0 0 chr5 84919968 84920006 -114710144 + (TG)n Simple_repeat Simple_repeat 2 39 0 415 244 99 23 chr5 84920820 84920951 -114709199 + MIR SINE MIR 52 192 -70 360 88 0 0 chr5 84920951 84921008 -114709142 + (GA)n Simple_repeat Simple_repeat 2 58 0 924 250 44 5 chr5 84921008 84921244 -114708906 + MIR SINE MIR 6 241 -21 304 232 179 9 chr5 84922314 84922426 -114707724 + MIR SINE MIR 74 204 -58 2158 90 37 3 chr5 84922480 84922806 -114707344 - AluSg SINE Alu 0 336 1 181 93 23 116 chr5 84923044 84923087 -114707063 - MIR SINE MIR -112 150 112 321 89 0 0 chr5 84923551 84923596 -114706554 + (TG)n Simple_repeat Simple_repeat 2 46 0 184 227 45 0 chr5 84923598 84923642 -114706508 + MIR SINE MIR 121 166 -96 2084 164 18 0 chr5 84923915 84924257 -114705893 - MER7A DNA MER2_type 0 346 1 41180 66 6 2 chr5 84924703 84928023 -114702127 - L1PA6 LINE L1 -1 6153 2794 2808 13 0 0 chr5 84928023 84928329 -114701821 - AluY SINE Alu -5 306 1 41180 66 6 2 chr5 84928329 84931125 -114699025 - L1PA6 LINE L1 -3360 2794 11 340 303 36 59 chr5 84931140 84931361 -114698789 - L1ME4a LINE L1 -283 5838 5623 581 226 153 53 chr5 84931456 84931646 -114698504 + MIR SINE MIR 30 238 -24 24 53 0 0 chr5 84931648 84931686 -114698464 + AT_rich Low_complexity Low_complexity 1 38 0 9281 160 24 5 chr5 84931749 84934026 -114696124 + L1PA16 LINE L1 18 2232 -4617 * 12443 207 36 18 chr5 84934022 84937435 -114692715 + L1PA16 LINE L1 2730 6194 -675 775 181 0 0 chr5 84937435 84937568 -114692582 + FLAM_C SINE Alu 1 133 0 1121 116 12 12 chr5 84937578 84937742 -114692408 + THE1B LTR MaLR 1 164 -200 1844 127 4 0 chr5 84937742 84938002 -114692148 + AluSx SINE Alu 39 299 -13 3746 130 72 23 chr5 84938014 84938670 -114691480 + L1PA16 LINE L1 6179 6866 -3 377 329 28 14 chr5 84938838 84938981 -114691169 - MIR SINE MIR -81 181 37 2263 104 3 7 chr5 84939289 84939596 -114690554 - AluSq SINE Alu -7 306 1 757 36 77 6 chr5 84939602 84939770 -114690380 + (TA)n Simple_repeat Simple_repeat 1 180 0 37 0 0 0 chr5 84939770 84939807 -114690343 + AT_rich Low_complexity Low_complexity 1 37 0 662 75 11 69 chr5 84939807 84939995 -114690155 + (TTATA)n Simple_repeat Simple_repeat 1 177 0 486 92 16 65 chr5 84939994 84940178 -114689972 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 31 58 0 0 chr5 84940178 84940230 -114689920 + AT_rich Low_complexity Low_complexity 1 52 0 243 167 43 0 chr5 84940230 84940368 -114689782 + (TA)n Simple_repeat Simple_repeat 2 145 0 22 0 0 0 chr5 84940535 84940557 -114689593 + AT_rich Low_complexity Low_complexity 1 22 0 397 210 0 0 chr5 84941078 84941159 -114688991 + L1M4 LINE L1 3437 3517 -2629 265 282 0 12 chr5 84942649 84942734 -114687416 + (TA)n Simple_repeat Simple_repeat 2 85 0 330 344 37 55 chr5 84943948 84944166 -114685984 + L2 LINE L2 2488 2701 -613 1796 130 16 31 chr5 84944187 84944510 -114685640 + L1PA16 LINE L1 5848 6165 -1 429 290 83 77 chr5 84944723 84945085 -114685065 + L2 LINE L2 2950 3313 0 231 114 0 0 chr5 84945833 84945868 -114684282 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 461 113 88 5 chr5 84945873 84946280 -114683870 + (TA)n Simple_repeat Simple_repeat 1 440 0 207 185 56 6 chr5 84946283 84946445 -114683705 + (TATAA)n Simple_repeat Simple_repeat 5 174 0 26 64 0 0 chr5 84946448 84946495 -114683655 + AT_rich Low_complexity Low_complexity 1 47 0 222 114 71 36 chr5 84946497 84946637 -114683513 + (TTATA)n Simple_repeat Simple_repeat 5 149 0 249 141 61 0 chr5 84946690 84946789 -114683361 + (TA)n Simple_repeat Simple_repeat 2 106 0 213 175 0 0 chr5 84947133 84947173 -114682977 + (TA)n Simple_repeat Simple_repeat 1 40 0 25 31 0 0 chr5 84947207 84947239 -114682911 + AT_rich Low_complexity Low_complexity 1 32 0 310 324 60 36 chr5 84947256 84947537 -114682613 - L1MC/D LINE L1 -2223 5585 5298 316 292 43 72 chr5 84948366 84948575 -114681575 - L3 LINE CR1 -245 1332 1130 200 97 32 0 chr5 84948575 84948606 -114681544 + CT-rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 84949197 84949220 -114680930 + AT_rich Low_complexity Low_complexity 1 23 0 309 24 0 0 chr5 84949220 84949261 -114680889 - L1PA2 LINE L1 -6 6149 6109 433 332 9 29 chr5 84949486 84949652 -114680498 - MIR3 SINE MIR -44 164 1 2180 126 3 0 chr5 84950368 84950669 -114679481 + AluSx SINE Alu 2 303 -9 196 254 18 97 chr5 84950800 84950914 -114679236 + MIR SINE MIR 35 139 -69 1626 182 48 34 chr5 84951953 84952159 -114677991 - MLT1B LTR MaLR 0 390 175 221 0 35 0 chr5 84952159 84952188 -114677962 + (GA)n Simple_repeat Simple_repeat 1 30 0 1626 182 48 34 chr5 84952188 84952332 -114677818 - MLT1B LTR MaLR -215 175 35 1884 119 49 3 chr5 84952566 84952852 -114677298 + AluSx SINE Alu 1 299 -13 514 334 190 16 chr5 84953531 84954185 -114675965 - L2 LINE L2 0 3313 2531 544 292 110 34 chr5 84954515 84955334 -114674816 - L1MC/D LINE L1 -1534 4612 3732 1577 179 7 30 chr5 84955422 84955724 -114674426 + AluJo SINE Alu 1 295 -17 477 305 127 32 chr5 84955742 84956184 -114673966 + L1M4 LINE L1 2606 3089 -3057 288 77 0 0 chr5 84956590 84956629 -114673521 + (TTCTCC)n Simple_repeat Simple_repeat 5 43 0 891 137 43 0 chr5 84957623 84957784 -114672366 + HSMAR2 DNA Mariner 2 169 -1133 1145 43 0 0 chr5 84957784 84957924 -114672226 + AluY SINE Alu 172 311 0 6240 134 16 20 chr5 84957932 84958106 -114672044 + HSMAR2 DNA Mariner 165 338 -964 2264 84 16 0 chr5 84958106 84958414 -114671736 + L1PA13 LINE L1 5846 6158 -5 6240 134 16 20 chr5 84958414 84959245 -114670905 + HSMAR2 DNA Mariner 338 1166 -136 563 218 18 0 chr5 84959605 84959715 -114670435 + MIR SINE MIR 40 151 -111 202 327 218 6 chr5 84960016 84960172 -114669978 - MIR SINE MIR -54 208 20 1631 157 43 18 chr5 84961268 84961549 -114668601 - AluJb SINE Alu 0 312 25 1462 150 0 5 chr5 84962158 84962378 -114667772 - AluSg/x SINE Alu -10 300 82 5340 40 6 1 chr5 84962553 84963206 -114666944 - L1PA7 LINE L1 0 6154 5499 514 281 8 0 chr5 84963575 84963703 -114666447 + MER94 DNA DNA 3 131 -3 351 293 130 65 chr5 84963743 84964051 -114666099 - L2 LINE L2 -256 3016 2680 401 319 142 9 chr5 84964363 84964708 -114665442 + L2 LINE L2 1564 1954 -1360 2343 121 86 0 chr5 84965796 84966242 -114663908 + MER1A DNA MER1_type 1 529 0 695 275 24 36 chr5 84966901 84967152 -114662998 + MIR SINE MIR 2 249 -13 335 225 81 45 chr5 84967156 84967272 -114662878 - MIR SINE MIR -64 144 49 1190 245 73 20 chr5 84967853 84968208 -114661942 - MLT1A2 LTR MaLR 0 374 1 1143 288 99 64 chr5 84968762 84969703 -114660447 - L2 LINE L2 -21 3292 2034 190 328 17 0 chr5 84969779 84969837 -114660313 - L2 LINE L2 -1426 1888 1830 228 214 24 48 chr5 84969844 84969928 -114660222 + L1MEd LINE L1 2 83 -6036 185 108 118 10 chr5 84970116 84970218 -114659932 + (TATAA)n Simple_repeat Simple_repeat 5 117 0 353 193 45 34 chr5 84970251 84970427 -114659723 + (TAG)n Simple_repeat Simple_repeat 2 179 0 359 56 42 14 chr5 84970428 84970500 -114659650 + (TA)n Simple_repeat Simple_repeat 1 74 0 2169 105 7 10 chr5 84970506 84970811 -114659339 + AluSq SINE Alu 1 304 -9 361 336 28 14 chr5 84971119 84971262 -114658888 + MIR SINE MIR 37 181 -81 3776 127 72 23 chr5 84971430 84972086 -114658064 - L1PA16 LINE L1 -3 6163 5476 349 114 117 14 chr5 84972100 84972199 -114657951 - AluY SINE Alu -6 295 205 332 264 48 16 chr5 85172963 85173088 -114457062 - HERV16 LTR ERVL -4761 235 107 899 319 46 22 chr5 85173176 85173265 -114456885 - LTR16A LTR ERVL -6 444 359 369 0 0 0 chr5 85173265 85173306 -114456844 + (CA)n Simple_repeat Simple_repeat 2 42 0 899 319 46 22 chr5 85173306 85173626 -114456524 - LTR16A LTR ERVL -91 359 25 2135 131 3 6 chr5 85174455 85174768 -114455382 - AluSx SINE Alu 0 312 1 608 270 183 34 chr5 85174774 85175065 -114455085 + L2 LINE L2 1989 2334 -980 1015 165 5 0 chr5 85175065 85175259 -114454891 + L1MA5 LINE L1 6104 6298 -2 608 270 183 34 chr5 85175259 85175289 -114454861 + L2 LINE L2 2334 2358 -956 673 168 8 24 chr5 85175312 85175437 -114454713 + FLAM_C SINE Alu 6 128 -15 449 251 15 96 chr5 85175463 85175662 -114454488 + L2 LINE L2 2351 2533 -781 2978 9 0 0 chr5 85175741 85176077 -114454073 + L1PA2 LINE L1 5816 6151 -4 742 305 91 51 chr5 85176476 85177106 -114453044 + L1M4 LINE L1 2254 2908 -3238 30 0 0 0 chr5 85177268 85177298 -114452852 + AT_rich Low_complexity Low_complexity 1 30 0 319 325 42 30 chr5 85177549 85177715 -114452435 - MER5B DNA MER1_type 0 178 11 306 238 286 14 chr5 85177940 85178087 -114452063 - MER5A DNA MER1_type -1 188 2 475 294 82 11 chr5 85178700 85178938 -114451212 - MIR SINE MIR -2 260 8 322 74 37 0 chr5 85180071 85180125 -114450025 + (TC)n Simple_repeat Simple_repeat 1 56 0 926 208 22 0 chr5 85180125 85180303 -114449847 - AluJb SINE Alu 0 312 131 1181 131 0 11 chr5 85180320 85180495 -114449655 + AluSq SINE Alu 66 238 -75 6292 140 68 38 chr5 85180517 85181852 -114448298 + pTR5 LTR ERV1 655 2029 -409 334 191 32 21 chr5 85181852 85181946 -114448204 + LTR30 LTR ERV1 548 642 -80 1274 93 57 0 chr5 85181947 85182141 -114448009 + LTR12 LTR ERV1 377 581 -133 451 149 0 0 chr5 85182143 85182296 -114447854 + AluSq SINE Alu 234 386 0 750 186 0 0 chr5 85182302 85182420 -114447730 - FLAM_C SINE Alu -15 118 1 950 221 5 0 chr5 85183468 85183676 -114446474 + MER2 DNA MER2_type 1 209 -136 25 51 0 0 chr5 85183681 85183720 -114446430 + AT_rich Low_complexity Low_complexity 1 39 0 2688 143 7 12 chr5 85183889 85184317 -114445833 + MSTA LTR MaLR 1 426 -2 403 284 140 18 chr5 85185385 85185614 -114444536 - MIR SINE MIR -5 257 1 367 288 114 26 chr5 85186010 85186242 -114443908 + L1M4 LINE L1 4256 4511 -1635 21 0 0 0 chr5 85186341 85186362 -114443788 + AT_rich Low_complexity Low_complexity 1 21 0 300 315 163 44 chr5 85186375 85186645 -114443505 - L2 LINE L2 -204 3109 2808 335 276 49 16 chr5 85187098 85187221 -114442929 + MLT1J LTR MaLR 290 416 -95 234 154 39 0 chr5 85187604 85187656 -114442494 + (TA)n Simple_repeat Simple_repeat 2 55 0 248 238 0 0 chr5 85188426 85188489 -114441661 - L1MC/D LINE L1 -1987 5821 5759 297 0 0 0 chr5 85188769 85188802 -114441348 + (TG)n Simple_repeat Simple_repeat 2 34 0 265 109 0 36 chr5 85188888 85188943 -114441207 - MLT2F LTR ERVL -2 661 609 1452 225 195 24 chr5 85189007 85189509 -114440641 - MLT2F LTR ERVL -64 599 12 2292 119 0 0 chr5 85189640 85189952 -114440198 + AluSx SINE Alu 1 312 0 2302 97 10 0 chr5 85189952 85190252 -114439898 + AluY SINE Alu 1 303 -8 2260 113 20 0 chr5 85191199 85191500 -114438650 + AluSx SINE Alu 1 307 -5 257 366 45 9 chr5 85191643 85191755 -114438395 + MER5A DNA MER1_type 19 134 -55 * 304 328 56 16 chr5 85191659 85191784 -114438366 - MER5A DNA MER1_type -25 164 35 2475 47 40 0 chr5 85192092 85192391 -114437759 + AluY SINE Alu 1 311 0 2022 146 78 18 chr5 85194093 85194490 -114435660 + Tigger2 DNA MER2_type 2297 2717 -1 530 15 0 15 chr5 85195026 85195094 -114435056 + (CA)n Simple_repeat Simple_repeat 1 67 0 896 336 96 11 chr5 85195920 85196360 -114433790 + L3 LINE CR1 633 1109 -468 184 328 191 16 chr5 85196436 85196619 -114433531 - L3 LINE CR1 -42 1535 1321 2165 154 3 24 chr5 85196756 85197125 -114433025 - THE1B LTR MaLR 0 364 4 21 89 0 0 chr5 85197235 85197291 -114432859 + AT_rich Low_complexity Low_complexity 1 56 0 38 22 0 0 chr5 85197521 85197566 -114432584 + AT_rich Low_complexity Low_complexity 1 45 0 934 187 16 19 chr5 85197645 85197892 -114432258 - MER39 LTR ERV1 -30 638 383 1100 135 62 10 chr5 85197909 85198117 -114432033 - MER39B LTR ERV1 -434 219 1 2207 125 0 0 chr5 85200086 85200383 -114429767 - AluSx SINE Alu -15 297 1 22 35 0 0 chr5 85200448 85200477 -114429673 + AT_rich Low_complexity Low_complexity 1 29 0 2153 151 15 75 chr5 85201551 85202029 -114428121 - MER39 LTR ERV1 0 707 259 299 170 372 0 chr5 85202003 85202097 -114428053 - MER39 LTR ERV1 -572 135 7 * 25 31 0 0 chr5 85202693 85202725 -114427425 + AT_rich Low_complexity Low_complexity 1 32 0 453 288 43 29 chr5 85202822 85202961 -114427189 - MIR SINE MIR -102 160 20 848 326 43 15 chr5 85204344 85204740 -114425410 + ERVL LTR ERVL 1590 1996 -3000 506 383 67 2 chr5 85204737 85205217 -114424933 + ERVL LTR ERVL 4333 4843 -921 * 365 297 9 9 chr5 85205244 85205355 -114424795 - MLT1H LTR MaLR -326 223 113 772 257 19 24 chr5 85205399 85205609 -114424541 - HERV16 LTR ERVL -3000 1996 1788 866 150 0 0 chr5 85206467 85206600 -114423550 - FLAM_C SINE Alu 0 133 1 332 330 57 5 chr5 85207066 85207260 -114422890 + L1MC4 LINE L1 5351 5554 -2254 779 135 0 0 chr5 85207618 85207729 -114422421 + AluSc SINE Alu 169 279 -30 285 283 106 9 chr5 85207746 85207859 -114422291 + Charlie8 DNA MER1_type 106 229 -2188 309 281 11 11 chr5 85208154 85208243 -114421907 + L1MC4 LINE L1 6615 6703 -1339 222 118 0 0 chr5 85208243 85208277 -114421873 + (TG)n Simple_repeat Simple_repeat 2 35 0 1380 155 23 4 chr5 85208277 85208535 -114421615 + L1M3f LINE L1 77 339 -4989 * 2544 173 7 0 chr5 85208534 85209104 -114421046 + L1M3f LINE L1 267 872 -4456 1665 160 160 16 chr5 85209113 85209487 -114420663 + MSTA LTR MaLR 1 428 0 832 189 50 35 chr5 85209637 85209838 -114420312 - MER20 DNA MER1_type 0 219 16 341 293 15 38 chr5 85211137 85211270 -114418880 + MIR SINE MIR 1 130 -132 1198 257 76 34 chr5 85212068 85212477 -114417673 - LTR16A LTR ERVL 0 450 25 5188 177 11 0 chr5 85214632 85215547 -114414603 - L1PA8 LINE L1 -2 6170 5211 5147 149 16 14 chr5 85216601 85217666 -114412484 - L1MB2 LINE L1 0 6171 5114 2218 122 3 3 chr5 85219232 85219543 -114410607 - AluSx SINE Alu -1 311 1 223 336 74 41 chr5 85219628 85219750 -114410400 - MIR3 SINE MIR -30 178 53 545 217 178 0 chr5 85219939 85220068 -114410082 + MIR3 SINE MIR 36 187 -21 442 217 57 0 chr5 85220700 85220806 -114409344 - MER94 DNA DNA -17 117 6 294 291 79 47 chr5 85221102 85221229 -114408921 + MIR3 SINE MIR 53 183 -25 486 0 0 0 chr5 85221925 85221979 -114408171 + (TG)n Simple_repeat Simple_repeat 2 55 0 188 139 0 23 chr5 85222188 85222231 -114407919 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 2193 89 0 0 chr5 85223627 85223907 -114406243 - AluSg SINE Alu -30 280 1 2275 202 114 52 chr5 85224677 85225454 -114404696 + LTR1B LTR ERV1 1 826 0 717 214 6 24 chr5 85225746 85225914 -114404236 - L1PB4 LINE L1 -1 6155 5991 332 237 36 0 chr5 85226006 85226097 -114404053 + MIR3 SINE MIR 73 168 -40 201 330 97 10 chr5 85226193 85226296 -114403854 - MIR SINE MIR -37 225 114 1888 182 32 47 chr5 85226417 85226980 -114403170 + MLT2A2 LTR ERVL 2 554 0 376 301 10 10 chr5 85227022 85227125 -114403025 - MER5A DNA MER1_type -83 106 4 5648 227 76 19 chr5 85227130 85229226 -114400924 - L1MEc LINE L1 -2154 4061 1900 1996 158 25 17 chr5 85229226 85229588 -114400562 - MER47A DNA MER2_type 0 366 2 5648 227 76 19 chr5 85229588 85229624 -114400526 - L1MEc LINE L1 -4315 1900 1867 3043 249 74 94 chr5 85230582 85231579 -114398571 - L1MEc LINE L1 -4537 1859 843 2417 118 16 16 chr5 85231579 85231943 -114398207 + THE1B LTR MaLR 1 364 0 3043 249 74 94 chr5 85231943 85232397 -114397753 - L1MEc LINE L1 -5553 843 381 1373 164 78 78 chr5 85232397 85232770 -114397380 + THE1C LTR MaLR 1 373 -2 9376 119 57 14 chr5 85232772 85234288 -114395862 + THE1C-int LTR MaLR 1 1580 0 1569 126 61 116 chr5 85234289 85234631 -114395519 + THE1C LTR MaLR 2 321 -54 2411 75 0 0 chr5 85234631 85234923 -114395227 + AluY SINE Alu 1 292 -19 1569 126 61 116 chr5 85234923 85234976 -114395174 + THE1C LTR MaLR 321 375 0 3043 249 74 94 chr5 85234976 85235358 -114394792 - L1MEc LINE L1 -6015 381 57 1008 288 115 37 chr5 85235373 85235611 -114394539 + L2 LINE L2 2686 2904 -409 3394 122 34 2 chr5 85235611 85236118 -114394032 - MER1A DNA MER1_type 0 527 5 1008 288 115 37 chr5 85236118 85236460 -114393690 + L2 LINE L2 2904 3310 -3 382 247 21 113 chr5 85238538 85238579 -114391571 - MER5B DNA MER1_type -1 177 134 2386 76 0 7 chr5 85238579 85238881 -114391269 - AluY SINE Alu -11 300 1 382 247 21 113 chr5 85238881 85239033 -114391117 - MER5B DNA MER1_type -44 134 2 517 264 28 60 chr5 85239699 85239881 -114390269 + MER5B DNA MER1_type 2 177 -1 313 302 31 25 chr5 85240817 85240981 -114389169 + MIR SINE MIR 77 247 -15 347 297 9 0 chr5 85241195 85241306 -114388844 + (CA)n Simple_repeat Simple_repeat 2 113 0 277 137 39 0 chr5 85243846 85243897 -114386253 + MLT1K LTR MaLR 529 581 -7 2819 216 89 21 chr5 85244952 85246196 -114383954 + L1ME2 LINE L1 4643 5997 -167 276 53 0 0 chr5 85246196 85246234 -114383916 + (TG)n Simple_repeat Simple_repeat 2 39 0 2819 216 89 21 chr5 85246234 85246333 -114383817 + L1ME2 LINE L1 5997 6088 -76 22 0 0 0 chr5 85246753 85246775 -114383375 + AT_rich Low_complexity Low_complexity 1 22 0 2337 162 45 9 chr5 85246997 85247416 -114382734 + Tigger2a DNA MER2_type 1 434 0 461 200 207 14 chr5 85247645 85247785 -114382365 - LTR16A1 LTR ERVL 0 457 291 655 276 51 86 chr5 85248553 85248904 -114381246 + L2 LINE L2 2960 3298 -15 358 367 25 0 chr5 85249744 85249902 -114380248 + MIR3 SINE MIR 47 208 0 876 218 21 63 chr5 85250691 85250930 -114379220 - MIR SINE MIR 0 262 34 1974 207 100 11 chr5 85251549 85251999 -114378151 + MLT2B1 LTR ERVL 1 534 -20 263 113 19 0 chr5 85251999 85252052 -114378098 + (TA)n Simple_repeat Simple_repeat 2 55 0 283 170 0 0 chr5 85252070 85252123 -114378027 + MLT2B1 LTR ERVL 465 517 -3 284 245 71 110 chr5 85252164 85252185 -114377965 - MIR SINE MIR -49 213 193 2390 90 0 3 chr5 85252185 85252497 -114377653 - AluY SINE Alu 0 311 1 284 245 71 110 chr5 85252497 85252630 -114377520 - MIR SINE MIR -69 193 65 3558 188 22 11 chr5 85252660 85253389 -114376761 + L1MB2 LINE L1 5433 6169 -2 385 323 98 24 chr5 85253448 85253511 -114376639 - MIR SINE MIR -72 190 133 1731 180 132 22 chr5 85253511 85253966 -114376184 + MLT1D LTR MaLR 1 505 0 385 323 98 24 chr5 85253966 85254066 -114376084 - MIR SINE MIR -129 133 15 348 168 141 121 chr5 85254536 85254685 -114375465 - L1ME2 LINE L1 -11 6153 6002 2917 152 77 63 chr5 85255005 85255722 -114374428 + LTR8A LTR ERV1 1 727 0 306 328 122 0 chr5 85256880 85257069 -114373081 + MIR SINE MIR 26 237 -25 2278 115 27 27 chr5 85257069 85257444 -114372706 + THE1C LTR MaLR 1 375 0 28 0 0 0 chr5 85257859 85257887 -114372263 + AT_rich Low_complexity Low_complexity 1 28 0 310 372 15 0 chr5 85258019 85258156 -114371994 + MIR3 SINE MIR 69 207 -1 25 0 0 0 chr5 85258413 85258438 -114371712 + AT_rich Low_complexity Low_complexity 1 25 0 1484 161 333 29 chr5 85258446 85258923 -114371227 - LTR29 LTR ERV1 0 622 1 575 311 53 13 chr5 85258933 85259158 -114370992 + Charlie8 DNA MER1_type 1 234 -2183 221 121 94 13 chr5 85259548 85259697 -114370453 + (TA)n Simple_repeat Simple_repeat 2 162 0 426 291 66 22 chr5 85259771 85260090 -114370060 + L1ME3 LINE L1 4459 4791 -1355 1465 207 45 102 chr5 85260146 85260745 -114369405 + L1MC5 LINE L1 6702 7266 -695 1624 244 74 15 chr5 85260753 85261281 -114368869 - MER74B LTR ERVL -9 613 55 1307 228 34 39 chr5 85261338 85261702 -114368448 + MLT1A1 LTR MaLR 1 455 -2 866 226 59 108 chr5 85261703 85262213 -114367937 + L1MC5 LINE L1 7397 7881 -80 22 35 0 0 chr5 85262226 85262255 -114367895 + AT_rich Low_complexity Low_complexity 1 29 0 359 306 91 13 chr5 85262338 85262676 -114367474 + L1ME3 LINE L1 5569 5939 -223 534 70 0 0 chr5 85264563 85264634 -114365516 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 239 32 32 0 chr5 85264635 85264666 -114365484 + U2 snRNA snRNA 4 35 -153 549 250 53 7 chr5 85265697 85265849 -114364301 - MIR SINE MIR -51 211 53 24 53 0 0 chr5 85266089 85266127 -114364023 + AT_rich Low_complexity Low_complexity 1 38 0 228 223 87 48 chr5 85266337 85266440 -114363710 - L1ME3A LINE L1 -221 5949 5843 2149 89 4 4 chr5 85266489 85266801 -114363349 - AluSc SINE Alu 0 312 1 503 304 70 19 chr5 85268091 85268305 -114361845 + MIR SINE MIR 18 242 -20 310 105 291 35 chr5 85269737 85269823 -114360327 + L1ME1 LINE L1 6057 6164 -2 370 267 35 43 chr5 85269897 85270013 -114360137 + MIR SINE MIR 32 146 -62 2433 77 3 6 chr5 85270073 85270385 -114359765 - AluY SINE Alu 0 311 1 712 188 0 8 chr5 85270404 85270532 -114359618 - FLAM_C SINE Alu -16 127 1 2233 129 16 14 chr5 85273267 85273630 -114356520 - THE1B LTR MaLR 0 364 1 508 300 62 0 chr5 85273677 85273837 -114356313 + MER117 DNA MER1_type 6 175 -22 1506 175 24 34 chr5 85274578 85274870 -114355280 - AluJo SINE Alu -23 289 1 2154 107 0 3 chr5 85274970 85275260 -114354890 - AluY SINE Alu -22 289 1 474 263 101 20 chr5 85275344 85275542 -114354608 + L2 LINE L2 3100 3313 0 1304 99 14 19 chr5 85276404 85276616 -114353534 - L1PA11 LINE L1 0 6174 5964 234 0 0 0 chr5 85277766 85277792 -114352358 + (T)n Simple_repeat Simple_repeat 1 26 0 869 153 0 0 chr5 85279334 85279465 -114350685 + FLAM_C SINE Alu 1 131 -2 689 262 55 0 chr5 85279751 85279934 -114350216 + MIR SINE MIR 57 249 -13 194 356 42 42 chr5 85280124 85280242 -114349908 + L2 LINE L2 3186 3303 -10 2175 104 3 25 chr5 85280741 85281058 -114349092 + AluSg SINE Alu 1 310 0 819 171 0 0 chr5 85281837 85281966 -114348184 - AluSq/x SINE Alu -183 129 1 1982 157 73 14 chr5 85282157 85282501 -114347649 - THE1B LTR MaLR 0 364 1 244 105 0 0 chr5 85282785 85282823 -114347327 + MIR SINE MIR 104 141 -121 21 0 0 0 chr5 85283069 85283090 -114347060 + AT_rich Low_complexity Low_complexity 1 21 0 282 299 19 57 chr5 85283147 85283304 -114346846 + L2 LINE L2 1869 2019 -1295 726 296 61 12 chr5 85283307 85283554 -114346596 + MIR SINE MIR 4 262 0 326 350 99 18 chr5 85283564 85283847 -114346303 + L2 LINE L2 2046 2351 -963 375 300 8 8 chr5 85284894 85285014 -114345136 - L2 LINE L2 -5 3308 3189 332 300 20 10 chr5 85285132 85285232 -114344918 - L1MC4 LINE L1 -1328 6714 6614 510 273 33 95 chr5 85286920 85287287 -114342863 + L1MC4 LINE L1 7326 7669 -373 445 88 15 0 chr5 85287337 85287405 -114342745 - LTR12 LTR ERV1 -269 445 377 300 262 10 0 chr5 85287406 85287509 -114342641 - LTR30 LTR ERV1 -80 642 539 791 57 153 0 chr5 85287509 85287633 -114342517 - pTR5 LTR ERV1 -418 2020 1878 985 109 0 0 chr5 85287633 85287761 -114342389 - AluSc SINE Alu -181 128 1 283 289 88 0 chr5 85287857 85287971 -114342179 + MIR SINE MIR 81 204 -58 719 259 27 0 chr5 85288138 85288323 -114341827 - LTR33 LTR ERVL -323 198 9 254 259 25 12 chr5 85288461 85288542 -114341608 - MLT1K LTR MaLR -350 238 157 185 313 0 0 chr5 85288631 85288679 -114341471 + L2 LINE L2 3251 3298 -15 34 24 0 0 chr5 85289697 85289738 -114340412 + AT_rich Low_complexity Low_complexity 1 41 0 230 230 250 40 chr5 85290398 85290498 -114339652 + MIR SINE MIR 28 148 -114 227 340 99 16 chr5 85290736 85290989 -114339161 + L1ME LINE L1 5623 5896 -274 229 266 0 16 chr5 85291123 85291187 -114338963 + GA-rich Low_complexity Low_complexity 3 65 0 553 280 32 16 chr5 85291433 85291619 -114338531 + MER5A DNA MER1_type 1 189 0 2632 107 33 35 chr5 85291718 85292177 -114337973 - L1MA5 LINE L1 -2 6298 5841 2207 126 3 0 chr5 85294259 85294569 -114335581 + AluSp SINE Alu 1 311 -2 189 260 280 20 chr5 85294821 85294921 -114335229 + MER5A DNA MER1_type 36 161 -28 22 0 0 0 chr5 85295388 85295410 -114334740 + AT_rich Low_complexity Low_complexity 1 22 0 1487 228 106 59 chr5 85295581 85296054 -114334096 - MLT1E LTR MaLR -49 544 50 1537 151 30 12 chr5 85296078 85296481 -114333669 + L1MB7 LINE L1 5138 5540 -634 625 215 27 44 chr5 85296481 85296755 -114333395 + MER31B LTR ERV1 8 390 -76 293 210 16 0 chr5 85296735 85296797 -114333353 + MER67D LTR ERV1 440 502 -12 * 3040 167 37 13 chr5 85296853 85297477 -114332673 + L1MB7 LINE L1 5537 6175 -9 1047 193 161 29 chr5 85297481 85297797 -114332353 - LTR49 LTR ERV1 0 595 238 478 234 36 22 chr5 85347836 85347973 -114282177 - MIR SINE MIR -67 195 57 1204 269 90 60 chr5 85348304 85349296 -114280854 - HAL1 LINE L1 -722 1785 764 273 365 10 10 chr5 85349974 85350078 -114280072 + MER5B DNA MER1_type 73 176 -2 475 275 48 30 chr5 85350696 85350863 -114279287 - MER5A DNA MER1_type -18 171 2 249 207 0 52 chr5 85352415 85352473 -114277677 - L2 LINE L2 -1 3271 3217 2132 90 10 3 chr5 85353503 85353791 -114276359 + AluSg SINE Alu 1 290 -20 5140 135 29 3 chr5 85354201 85355053 -114275097 + L1MA5 LINE L1 5423 6296 -4 23 33 0 0 chr5 85355080 85355110 -114275040 + AT_rich Low_complexity Low_complexity 1 30 0 974 282 29 22 chr5 85355837 85356110 -114274040 + MLT1H LTR MaLR 1 275 -274 236 178 67 0 chr5 85356364 85356409 -114273741 + MLT1H LTR MaLR 500 547 -2 3268 86 4 7 chr5 85356497 85356949 -114273201 + L1PA7 LINE L1 5686 6136 -18 343 325 71 58 chr5 85357093 85357527 -114272623 - L1M4 LINE L1 -757 5887 5448 327 375 96 20 chr5 85357523 85357963 -114272187 - L1M4 LINE L1 -3315 3329 2857 * 6089 222 44 41 chr5 85358216 85358784 -114271366 - L1M4 LINE L1 -4791 1855 1291 270 0 0 0 chr5 85358784 85358814 -114271336 + (TA)n Simple_repeat Simple_repeat 2 31 0 6089 222 44 41 chr5 85358814 85360062 -114270088 - L1M4 LINE L1 -5355 1291 12 205 182 0 0 chr5 85360301 85360334 -114269816 + polypyrimidine Low_complexity Low_complexity 3 35 0 6139 171 15 10 chr5 85360362 85361564 -114268586 - L1MC1 LINE L1 -6 6327 5122 958 279 104 43 chr5 85361704 85362398 -114267752 - HAL1b LINE L1 -515 833 98 22 0 0 0 chr5 85362523 85362545 -114267605 + AT_rich Low_complexity Low_complexity 1 22 0 44 56 0 0 chr5 85364177 85364249 -114265901 + AT_rich Low_complexity Low_complexity 1 72 0 21 0 0 0 chr5 85364356 85364377 -114265773 + AT_rich Low_complexity Low_complexity 1 21 0 229 239 28 92 chr5 85364532 85364641 -114265509 - L2 LINE L2 -433 2881 2780 1571 200 49 25 chr5 85364664 85365029 -114265121 - MLT1A2 LTR MaLR 0 374 1 28 29 0 0 chr5 85365148 85365183 -114264967 + AT_rich Low_complexity Low_complexity 1 35 0 1958 111 19 4 chr5 85365302 85365572 -114264578 + AluSc SINE Alu 1 274 -35 243 0 0 0 chr5 85365573 85365600 -114264550 + (TC)n Simple_repeat Simple_repeat 2 28 0 222 37 0 0 chr5 85365599 85365626 -114264524 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 2189 169 73 47 chr5 85365773 85366265 -114263885 + MLT1D LTR MaLR 1 505 0 192 323 118 21 chr5 85369807 85369900 -114260250 + L2 LINE L2 3155 3256 -16 25 83 0 0 chr5 85370076 85370136 -114260014 + AT_rich Low_complexity Low_complexity 1 60 0 1022 223 121 0 chr5 85370144 85370368 -114259782 - MIR SINE MIR -3 259 9 227 253 147 11 chr5 85370872 85370967 -114259183 - HAL1b LINE L1 -442 906 799 2244 80 0 28 chr5 85371543 85371854 -114258296 + AluY SINE Alu 1 303 0 339 311 207 0 chr5 85371874 85372009 -114258141 - HAL1 LINE L1 -607 1900 1738 3093 139 49 9 chr5 85372076 85372602 -114257548 + LTR10A LTR ERV1 1 547 -62 537 267 73 11 chr5 85372661 85372852 -114257298 - HAL1 LINE L1 -897 1610 1408 210 37 0 0 chr5 85372878 85372905 -114257245 + (CA)n Simple_repeat Simple_repeat 2 28 0 502 259 34 75 chr5 85372906 85373057 -114257093 - HAL1 LINE L1 -1258 1249 1114 1971 136 48 0 chr5 85373057 85373352 -114256798 - AluSx SINE Alu -3 309 1 502 259 34 75 chr5 85373352 85373494 -114256656 - HAL1 LINE L1 -1393 1114 968 214 284 68 14 chr5 85373510 85373584 -114256566 + MIR SINE MIR 21 98 -164 1457 242 55 19 chr5 85373585 85374007 -114256143 + LTR47B LTR ERVL 1 437 -6 651 281 6 0 chr5 85374013 85374180 -114255970 + MIR SINE MIR 95 262 0 186 43 0 0 chr5 85374257 85374280 -114255870 + (TA)n Simple_repeat Simple_repeat 2 24 0 1962 179 32 45 chr5 85375320 85375783 -114254367 - MSTB2 LTR MaLR 0 457 1 232 333 28 28 chr5 85375864 85375972 -114254178 - MIR SINE MIR -99 163 56 23 0 0 0 chr5 85376087 85376110 -114254040 + AT_rich Low_complexity Low_complexity 1 23 0 781 277 15 15 chr5 85377999 85378259 -114251891 + MIR SINE MIR 2 261 -1 339 315 79 39 chr5 85378377 85378631 -114251519 - L2 LINE L2 -881 2433 2170 1812 167 14 0 chr5 85380055 85380348 -114249802 - AluJo SINE Alu -15 297 1 393 313 25 84 chr5 85381994 85382269 -114247881 - L2 LINE L2 -50 3263 3005 371 328 22 43 chr5 85382409 85382706 -114247444 + MLT1I LTR MaLR 31 286 -123 273 252 26 104 chr5 85382752 85382867 -114247283 + MLT1I LTR MaLR 428 533 -16 234 0 0 0 chr5 85383163 85383189 -114246961 + (TA)n Simple_repeat Simple_repeat 2 27 0 2296 81 0 39 chr5 85383189 85383498 -114246652 - AluY SINE Alu -14 297 1 682 209 0 0 chr5 85384737 85384852 -114245298 + FLAM_C SINE Alu 5 119 -24 189 74 0 0 chr5 85385512 85385539 -114244611 + (TAA)n Simple_repeat Simple_repeat 1 27 0 2304 98 0 13 chr5 85385679 85385995 -114244155 - AluSx SINE Alu 0 312 1 1158 238 52 19 chr5 85386678 85386985 -114243165 - MLT1B LTR MaLR 0 390 74 250 146 24 0 chr5 85387087 85387128 -114243022 - MLT1B LTR MaLR -425 42 1 42392 36 24 1 chr5 85389136 85395153 -114234997 + L1PA3 LINE L1 1 6155 0 28 48 0 0 chr5 85395153 85395195 -114234955 + AT_rich Low_complexity Low_complexity 1 42 0 34864 56 6 0 chr5 85396153 85401505 -114228645 + L1PA3 LINE L1 773 6155 0 28 48 0 0 chr5 85401505 85401547 -114228603 + AT_rich Low_complexity Low_complexity 1 42 0 236 146 73 12 chr5 85402891 85402973 -114227177 + CT-rich Low_complexity Low_complexity 5 91 0 2502 159 23 2 chr5 85403093 85403739 -114226411 + MER50 LTR ERV1 1 711 -23 28 29 0 0 chr5 85404710 85404745 -114225405 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 85405604 85405627 -114224523 + AT_rich Low_complexity Low_complexity 1 23 0 2764 101 23 7 chr5 85405935 85406356 -114223794 - L1PA13 LINE L1 -33 6130 5700 378 326 65 47 chr5 85406361 85406511 -114223639 + L1ME4a LINE L1 4029 4175 -1971 1945 150 16 3 chr5 85406511 85406818 -114223332 + AluSq SINE Alu 3 313 0 378 326 65 47 chr5 85406818 85407007 -114223143 + L1ME4a LINE L1 4175 4374 -1772 39898 77 8 0 chr5 85407115 85412464 -114217686 + L1PA4 LINE L1 15 5402 -744 342 25 0 0 chr5 85412478 85412518 -114217632 + L1P LINE L1 11 50 -6096 6696 22 3 0 chr5 85412518 85413300 -114216850 + L1PA4 LINE L1 5369 6152 -3 3041 44 0 8 chr5 85413445 85413831 -114216319 + L1PA5 LINE L1 5770 6152 -2 838 200 94 36 chr5 85413832 85414162 -114215988 + L1MC5 LINE L1 7340 7688 -273 24 53 0 0 chr5 85414280 85414318 -114215832 + AT_rich Low_complexity Low_complexity 1 38 0 287 263 58 96 chr5 85414484 85414828 -114215322 + L1ME4a LINE L1 5295 5625 -496 226 235 56 67 chr5 85415021 85415200 -114214950 + L1ME4a LINE L1 5934 6110 -11 363 250 79 65 chr5 85415494 85415710 -114214440 + MER20B DNA MER1_type 1 219 0 2280 94 0 0 chr5 85416823 85417121 -114213029 + AluY SINE Alu 1 298 -13 2372 100 0 0 chr5 85417562 85417873 -114212277 + AluSx SINE Alu 1 311 -1 5515 261 69 22 chr5 85418099 85419391 -114210759 + L1MEc LINE L1 36 1458 -4938 1954 150 0 26 chr5 85419391 85419697 -114210453 + AluJb SINE Alu 9 306 -6 5515 261 69 22 chr5 85419697 85420414 -114209736 + L1MEc LINE L1 1458 2140 -4256 4938 248 78 48 chr5 85420514 85420843 -114209307 + L1MEc LINE L1 2418 2736 -3503 2429 67 3 10 chr5 85420843 85421155 -114208995 - AluY SINE Alu -1 310 1 4938 248 78 48 chr5 85421155 85422790 -114207360 + L1MEc LINE L1 2736 4320 -1919 1783 176 7 0 chr5 85422790 85423079 -114207071 - AluJb SINE Alu -21 291 1 4938 248 78 48 chr5 85423079 85424345 -114205805 + L1MEc LINE L1 4320 5771 -468 288 77 0 0 chr5 85424345 85424384 -114205766 + (CA)n Simple_repeat Simple_repeat 2 40 0 4938 248 78 48 chr5 85424384 85424858 -114205292 + L1MEc LINE L1 5771 6229 -10 844 227 16 0 chr5 85425254 85425439 -114204711 + MIR SINE MIR 34 221 -41 21 0 0 0 chr5 85426635 85426656 -114203494 + AT_rich Low_complexity Low_complexity 1 21 0 378 0 0 0 chr5 85426957 85426999 -114203151 + (CA)n Simple_repeat Simple_repeat 2 43 0 418 333 95 9 chr5 85427009 85427219 -114202931 + MIR SINE MIR 20 247 -15 850 338 120 6 chr5 85427247 85427929 -114202221 - L2 LINE L2 -9 3304 2544 255 324 113 7 chr5 85429446 85429627 -114200523 - MIR SINE MIR -6 256 61 189 330 41 88 chr5 85429997 85430191 -114199959 - MIR3 SINE MIR -7 201 17 5136 176 54 16 chr5 85430562 85431288 -114198862 + L1MA4 LINE L1 3 777 -4551 2250 95 0 13 chr5 85431288 85431593 -114198557 + AluSq SINE Alu 1 301 -12 5136 176 54 16 chr5 85431593 85431851 -114198299 + L1MA4 LINE L1 777 1024 -4304 1734 186 140 18 chr5 85432174 85432657 -114197493 - LTR10A LTR ERV1 -43 590 1 5677 254 13 27 chr5 85432657 85433647 -114196503 - LTR10A-int LTR ERV1 -1 6648 5685 6095 62 16 1 chr5 85433647 85434416 -114195734 - LTR17 LTR ERV1 0 780 1 5677 254 13 27 chr5 85434416 85434939 -114195211 - LTR10A-int LTR ERV1 -964 5685 5156 7585 107 30 14 chr5 85434982 85435418 -114194732 - Harlequin LTR ERV1 -3875 3021 2594 2418 74 0 22 chr5 85435418 85435729 -114194421 - AluY SINE Alu -7 304 1 7585 107 30 14 chr5 85435729 85436135 -114194015 - Harlequin LTR ERV1 -4302 2594 2151 2429 70 0 0 chr5 85436135 85436433 -114193717 - AluY SINE Alu -13 298 1 7585 107 30 14 chr5 85436433 85436769 -114193381 - Harlequin LTR ERV1 -4745 2151 1822 314 210 210 0 chr5 85436775 85436856 -114193294 + LTR8 LTR ERV1 156 253 -438 5413 104 1 40 chr5 85436858 85437852 -114192298 - LTR10A-int LTR ERV1 -5176 1720 719 257 183 118 86 chr5 85437841 85437934 -114192216 - LTR10A-int LTR ERV1 -5579 1070 975 * 1182 220 79 112 chr5 85438004 85438636 -114191514 - LTR10A-int LTR ERV1 -6033 616 6 1444 182 87 26 chr5 85438654 85439000 -114191150 - LTR10A LTR ERV1 -64 545 179 306 245 161 58 chr5 85439055 85439316 -114190834 - LTR10A LTR ERV1 -309 300 13 2785 228 32 13 chr5 85441607 85442357 -114187793 + L1MA4 LINE L1 1017 1780 -4548 703 123 16 0 chr5 85442357 85442479 -114187671 + GA-rich Low_complexity Low_complexity 4 127 0 1706 220 54 39 chr5 85442479 85442787 -114187363 + L1MA4 LINE L1 1769 2092 -4236 2265 106 7 0 chr5 85442787 85443088 -114187062 + AluSq SINE Alu 2 304 -9 1706 220 54 39 chr5 85443088 85443374 -114186776 + L1MA4 LINE L1 2092 2372 -3956 2041 75 8 0 chr5 85443374 85443628 -114186522 + AluY SINE Alu 1 256 -55 1655 82 41 5 chr5 85443628 85443845 -114186305 - AluSg SINE Alu -83 227 1 10083 166 38 18 chr5 85443845 85446890 -114183260 + L1MA4 LINE L1 3377 6482 0 856 178 83 6 chr5 85447397 85447566 -114182584 - MER5A DNA MER1_type -7 182 1 1972 113 56 0 chr5 85449834 85450118 -114180032 - AluSx SINE Alu -12 300 1 486 49 0 0 chr5 85450377 85450438 -114179712 + (TCCTG)n Simple_repeat Simple_repeat 2 62 0 223 238 0 40 chr5 85451063 85451164 -114178986 + (TAAA)n Simple_repeat Simple_repeat 4 100 0 222 242 30 0 chr5 85451203 85451302 -114178848 + (TA)n Simple_repeat Simple_repeat 1 102 0 429 341 49 8 chr5 85452439 85452685 -114177465 - L2 LINE L2 -736 2578 2323 682 266 202 0 chr5 85454203 85454470 -114175680 - MLT1K LTR MaLR -115 473 153 537 274 60 105 chr5 85455139 85455405 -114174745 + MIR SINE MIR 8 261 -1 28 29 0 0 chr5 85456421 85456456 -114173694 + AT_rich Low_complexity Low_complexity 1 35 0 333 322 0 0 chr5 85456588 85456675 -114173475 + L2 LINE L2 3193 3279 -34 181 261 29 43 chr5 85456716 85456785 -114173365 - L2 LINE L2 -1 3312 3245 2264 70 21 3 chr5 85456878 85457162 -114172988 + AluY SINE Alu 8 296 -15 217 286 19 76 chr5 85457563 85457668 -114172482 - MIR SINE MIR -50 212 114 543 273 20 0 chr5 85458582 85458726 -114171424 - MIR3 SINE MIR -7 201 56 341 273 133 16 chr5 85459223 85459351 -114170799 + MER5A DNA MER1_type 20 162 -27 614 234 84 6 chr5 85459547 85459714 -114170436 - MER104 DNA Tc2 0 180 1 30 27 0 0 chr5 85460425 85460462 -114169688 + AT_rich Low_complexity Low_complexity 1 37 0 709 273 152 35 chr5 85461199 85461632 -114168518 + LTR33A LTR ERVL 40 523 0 30 27 0 0 chr5 85462584 85462621 -114167529 + AT_rich Low_complexity Low_complexity 1 37 0 222 316 51 13 chr5 85464369 85464448 -114165702 + MIR3 SINE MIR 14 95 -113 347 292 103 46 chr5 85464494 85464689 -114165461 - MIR SINE MIR -51 211 6 249 324 27 103 chr5 85464623 85464808 -114165342 + MIR3 SINE MIR 37 207 -1 * 296 265 304 22 chr5 85465789 85465970 -114164180 - MIR SINE MIR -27 235 4 27 0 0 0 chr5 85466620 85466647 -114163503 + AT_rich Low_complexity Low_complexity 1 27 0 397 283 160 53 chr5 85466874 85467231 -114162919 + MLT1J LTR MaLR 115 509 -2 200 427 100 7 chr5 85470700 85471159 -114158991 - L2 LINE L2 -559 2755 2254 218 274 0 0 chr5 85471390 85471441 -114158709 + L2 LINE L2 3263 3313 0 1984 125 7 7 chr5 85471691 85471987 -114158163 + AluSx SINE Alu 1 296 -16 227 146 0 0 chr5 85472322 85472370 -114157780 - LTR66 LTR ERVL -169 441 394 246 220 0 0 chr5 85472372 85472431 -114157719 + (TA)n Simple_repeat Simple_repeat 2 60 0 22 0 0 0 chr5 85472496 85472518 -114157632 + AT_rich Low_complexity Low_complexity 1 22 0 2224 126 0 0 chr5 85473916 85474225 -114155925 - AluSc SINE Alu 0 309 1 223 330 22 70 chr5 85474523 85474662 -114155488 - MIR SINE MIR -42 220 91 2060 136 72 17 chr5 85474662 85475007 -114155143 - THE1B LTR MaLR 0 364 1 223 330 22 70 chr5 85475007 85475052 -114155098 - MIR SINE MIR -171 91 45 428 253 208 28 chr5 85475218 85475396 -114154754 + MIR SINE MIR 5 214 -48 327 319 52 15 chr5 85476272 85476407 -114153743 - MLT1L LTR MaLR 0 615 476 412 333 177 0 chr5 85477856 85478042 -114152108 - MIR SINE MIR -7 255 37 1749 130 8 8 chr5 85478043 85478305 -114151845 + AluSx SINE Alu 34 295 -17 966 333 151 35 chr5 85479260 85479670 -114150480 - L3 LINE CR1 -322 1255 894 2333 52 42 0 chr5 85479670 85479956 -114150194 - AluY SINE Alu -13 298 1 966 333 151 35 chr5 85479956 85480286 -114149864 - L3 LINE CR1 -683 894 429 809 259 214 35 chr5 85480534 85480932 -114149218 - L2 LINE L2 -18 3295 2827 270 327 59 20 chr5 85480951 85481104 -114149046 + MER20B DNA MER1_type 2 160 -623 2500 62 3 0 chr5 85481121 85481429 -114148721 + AluY SINE Alu 1 309 -2 1220 294 44 39 chr5 85481493 85481928 -114148222 - L2 LINE L2 -517 2797 2361 451 304 9 9 chr5 85485137 85485252 -114144898 + L2 LINE L2 3154 3268 -4 2455 62 0 0 chr5 85486153 85486445 -114143705 - AluY SINE Alu -19 292 1 21 0 0 0 chr5 85486900 85486921 -114143229 + AT_rich Low_complexity Low_complexity 1 21 0 1496 167 27 27 chr5 85487240 85487534 -114142616 - AluJb SINE Alu -16 296 3 2551 45 0 0 chr5 85487706 85488016 -114142134 + L1PA7 LINE L1 5842 6151 -3 271 257 71 53 chr5 85488117 85488230 -114141920 - MIR SINE MIR -82 180 66 204 319 148 58 chr5 85488930 85489309 -114140841 - L2 LINE L2 -463 2851 2439 186 43 0 0 chr5 85489341 85489364 -114140786 + (GA)n Simple_repeat Simple_repeat 2 24 0 293 68 23 0 chr5 85490662 85490706 -114139444 + (TTTTC)n Simple_repeat Simple_repeat 4 48 0 2081 130 3 7 chr5 85490962 85491269 -114138881 - AluSx SINE Alu -2 310 5 25 0 0 0 chr5 85491383 85491408 -114138742 + AT_rich Low_complexity Low_complexity 1 25 0 322 221 105 0 chr5 85492128 85492214 -114137936 + L1MC3 LINE L1 7084 7178 -607 8255 159 23 0 chr5 85492251 85493552 -114136598 + L1M1 LINE L1 16 1346 -6219 328 254 116 43 chr5 85493646 85493784 -114136366 + L3 LINE CR1 553 700 -877 22 0 0 0 chr5 85493804 85493826 -114136324 + AT_rich Low_complexity Low_complexity 1 22 0 400 356 34 6 chr5 85493908 85494085 -114136065 + L3 LINE CR1 1355 1536 -41 27 29 0 0 chr5 85494901 85494935 -114135215 + AT_rich Low_complexity Low_complexity 1 34 0 190 255 137 0 chr5 85494992 85495043 -114135107 - L2 LINE L2 -1 3271 3214 5348 159 36 36 chr5 85495493 85496566 -114133584 + L1MC3 LINE L1 6705 7777 -8 1021 200 85 23 chr5 85496858 85497163 -114132987 + MER33 DNA MER1_type 1 324 0 682 78 0 0 chr5 85501356 85501446 -114128704 - AluSg/x SINE Alu -13 296 207 2322 89 3 0 chr5 85502464 85502757 -114127393 - AluSp SINE Alu -17 296 3 636 301 77 0 chr5 85502883 85503079 -114127071 + MIR SINE MIR 20 230 -32 908 204 23 6 chr5 85503228 85503400 -114126750 - MER5A DNA MER1_type -1 188 14 534 330 36 13 chr5 85503712 85503936 -114126214 + MIR SINE MIR 15 243 -19 427 218 139 0 chr5 85506018 85506119 -114124031 - FLAM_C SINE Alu -26 117 3 1563 154 20 111 chr5 85506380 85506723 -114123427 - AluJo SINE Alu 0 312 1 2274 102 0 0 chr5 85507108 85507402 -114122748 + AluSx SINE Alu 1 294 -18 349 266 108 59 chr5 85507472 85507833 -114122317 + MLT1H LTR MaLR 69 536 -13 263 322 52 9 chr5 85508040 85508155 -114121995 + LTR67 LTR ERVL 434 553 -4 24 0 0 0 chr5 85508408 85508432 -114121718 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 85509668 85509696 -114120454 + AT_rich Low_complexity Low_complexity 1 28 0 2193 123 0 16 chr5 85509824 85510141 -114120009 - AluSx SINE Alu 0 312 1 304 270 68 25 chr5 85511003 85511166 -114118984 + L1ME4a LINE L1 5728 5897 -224 249 205 84 12 chr5 85511234 85511317 -114118833 + L1ME4a LINE L1 6000 6088 -33 1134 237 128 22 chr5 85513286 85513741 -114116409 + MLT2F LTR ERVL 3 595 -68 344 320 30 0 chr5 85514082 85514182 -114115968 + L2 LINE L2 3145 3247 -25 1964 93 33 0 chr5 85517575 85517875 -114112275 + L1PA13 LINE L1 5854 6163 0 208 125 0 114 chr5 85518580 85518668 -114111482 + (CAAAAA)n Simple_repeat Simple_repeat 1 78 0 24 32 0 0 chr5 85521476 85521507 -114108643 + AT_rich Low_complexity Low_complexity 1 31 0 622 233 86 0 chr5 85522768 85522931 -114107219 - MER20 DNA MER1_type -6 213 37 22 0 0 0 chr5 85523510 85523532 -114106618 + AT_rich Low_complexity Low_complexity 1 22 0 2244 91 0 3 chr5 85523576 85523872 -114106278 + AluSg SINE Alu 1 295 -15 265 274 96 0 chr5 85523904 85523977 -114106173 - L2 LINE L2 0 3272 3193 303 79 0 0 chr5 85524073 85524111 -114106039 + U2 snRNA snRNA 1 38 -150 1888 121 57 0 chr5 85524442 85524723 -114105427 - AluSx SINE Alu -15 297 1 345 203 0 13 chr5 85526283 85526362 -114103788 + MIR SINE MIR 147 224 -38 209 386 55 0 chr5 85528312 85528439 -114101711 + MIR3 SINE MIR 60 193 -15 1158 158 77 14 chr5 85528570 85528792 -114101358 + MER46A DNA MER2_type 1 236 0 201 368 18 9 chr5 85529033 85529147 -114101003 + L2 LINE L2 3178 3292 -21 616 283 128 57 chr5 85529405 85529674 -114100476 + L1M4 LINE L1 4235 4548 -1598 1868 167 75 45 chr5 85529674 85530116 -114100034 + MSTB2 LTR MaLR 1 455 -2 616 283 128 57 chr5 85530116 85530284 -114099866 + L1M4 LINE L1 4548 4703 -1443 1842 139 0 29 chr5 85530551 85530831 -114099319 - AluSx SINE Alu -30 282 11 21 0 0 0 chr5 85531162 85531183 -114098967 + AT_rich Low_complexity Low_complexity 1 21 0 217 224 61 0 chr5 85531415 85531464 -114098686 - MIR SINE MIR -106 156 105 187 271 86 0 chr5 85532587 85532657 -114097493 + L2 LINE L2 2985 3060 -212 21 71 0 0 chr5 85533741 85533783 -114096367 + AT_rich Low_complexity Low_complexity 1 42 0 298 265 0 60 chr5 85534905 85534988 -114095162 + MIR3 SINE MIR 87 164 -44 230 197 239 0 chr5 85535456 85535527 -114094623 - MER5B DNA MER1_type -16 162 75 1490 115 13 18 chr5 85535558 85535784 -114094366 - AluSg/x SINE Alu -23 289 65 496 167 206 8 chr5 85535871 85535997 -114094153 + Charlie1a DNA MER1_type 2 152 -1303 482 296 28 0 chr5 85536094 85536236 -114093914 + MIR SINE MIR 9 154 -108 2266 179 128 12 chr5 85536298 85536800 -114093350 - MER6A DNA MER2_type 0 605 46 306 329 70 70 chr5 85536807 85537236 -114092914 + L2 LINE L2 2468 2896 -418 229 271 0 0 chr5 85537731 85537779 -114092371 + L2 LINE L2 3141 3188 -84 2195 87 4 0 chr5 85537791 85538066 -114092084 - AluSp SINE Alu -17 296 21 2376 78 0 3 chr5 85538481 85538775 -114091375 + AluSc SINE Alu 1 293 -16 339 315 152 17 chr5 85539123 85539301 -114090849 + MIR SINE MIR 49 250 -12 21 0 0 0 chr5 85542170 85542191 -114087959 + AT_rich Low_complexity Low_complexity 1 21 0 1896 138 3 20 chr5 85542548 85542845 -114087305 - AluJb SINE Alu -15 297 6 428 244 0 0 chr5 85542988 85543078 -114087072 + MIR SINE MIR 173 262 0 3396 198 59 10 chr5 85543171 85543261 -114086889 + MER44D DNA MER2_type 1 85 -2402 2324 94 3 0 chr5 85543261 85543559 -114086591 + AluSx SINE Alu 1 299 -13 3396 198 59 10 chr5 85543559 85544166 -114085984 + MER44D DNA MER2_type 85 604 -1 327 297 69 7 chr5 85544520 85544665 -114085485 + L1MA9 LINE L1 6119 6272 -40 379 267 107 0 chr5 85544724 85544855 -114085295 + L2 LINE L2 1681 1825 -1489 1278 235 82 65 chr5 85544856 85545268 -114084882 + L2 LINE L2 2298 2716 -598 1428 173 8 0 chr5 85545292 85545540 -114084610 + L1MD3 LINE L1 7730 7979 -16 1316 265 55 51 chr5 85545559 85545649 -114084501 + L2 LINE L2 2722 2810 -503 1346 129 76 0 chr5 85545649 85545859 -114084291 - MER30 DNA MER1_type -4 226 1 1316 265 55 51 chr5 85545859 85546364 -114083786 + L2 LINE L2 2810 3311 -2 2136 106 0 3 chr5 85546393 85546677 -114083473 - AluSg SINE Alu -11 299 17 263 179 0 0 chr5 85546677 85546716 -114083434 - AluSg SINE Alu -262 39 1 410 300 116 86 chr5 85546777 85547114 -114083036 + L2 LINE L2 2911 3257 -15 2892 128 9 22 chr5 85549247 85549691 -114080459 - Tigger2 DNA MER2_type -1 2717 2280 279 243 0 14 chr5 85549689 85549759 -114080391 - Tigger2 DNA MER2_type -2649 69 1 * 2227 119 0 0 chr5 85550052 85550355 -114079795 + AluSx SINE Alu 1 303 -9 2149 133 0 0 chr5 85550398 85550692 -114079458 + AluSx SINE Alu 1 294 -18 25 75 0 0 chr5 85551258 85551311 -114078839 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr5 85551679 85551700 -114078450 + AT_rich Low_complexity Low_complexity 1 21 0 912 222 43 5 chr5 85552490 85552675 -114077475 - MER21B LTR ERV1 -111 752 561 730 273 62 13 chr5 85552839 85553066 -114077084 - MER21B LTR ERV1 -313 550 313 745 151 0 8 chr5 85553075 85553194 -114076956 - FRAM SINE Alu -18 158 41 1895 131 52 63 chr5 85553194 85553560 -114076590 + THE1B LTR MaLR 1 362 -2 514 188 54 9 chr5 85553619 85553731 -114076419 - MER21B LTR ERV1 -644 219 103 503 250 9 0 chr5 85553762 85553870 -114076280 - MER21B LTR ERV1 -754 109 1 28 48 0 0 chr5 85553877 85553919 -114076231 + AT_rich Low_complexity Low_complexity 1 42 0 4445 191 39 18 chr5 85553922 85554165 -114075985 - L1MA7 LINE L1 -22 6269 6032 1770 174 47 14 chr5 85554165 85554528 -114075622 - THE1C LTR MaLR 0 375 1 4445 191 39 18 chr5 85554528 85555437 -114074713 - L1MA7 LINE L1 -259 6032 5093 3174 233 64 39 chr5 85555439 85556033 -114074117 + L1M1 LINE L1 3020 3598 -3967 261 0 0 0 chr5 85556033 85556062 -114074088 + (CA)n Simple_repeat Simple_repeat 2 30 0 3174 233 64 39 chr5 85556062 85556827 -114073323 + L1M1 LINE L1 3598 4405 -3160 1168 255 32 28 chr5 85556827 85557298 -114072852 - L1M3a LINE L1 -4298 2053 1581 720 130 22 0 chr5 85557298 85557436 -114072714 + C-rich Low_complexity Low_complexity 4 144 0 831 195 98 4 chr5 85557440 85557696 -114072454 - L1M3a LINE L1 -4678 1603 1324 792 179 0 68 chr5 85557696 85557858 -114072292 - FRAM SINE Alu -16 160 10 1340 293 10 62 chr5 85557866 85558368 -114071782 - L1M3a LINE L1 -4952 1329 854 252 296 52 15 chr5 85558569 85558704 -114071446 - L1M3a LINE L1 -5277 994 855 239 317 98 18 chr5 85558742 85558966 -114071184 - L1M3a LINE L1 -5173 782 344 940 302 110 37 chr5 85559060 85559686 -114070464 - L1M3a LINE L1 -5226 1045 374 423 259 73 73 chr5 85559721 85559995 -114070155 + MER102a DNA MER1_type 56 329 -1 335 191 0 0 chr5 85560254 85560322 -114069828 - MER116 DNA Mariner -5 75 8 425 279 27 0 chr5 85561369 85561480 -114068670 + MER81 DNA DNA 1 114 0 21 0 0 0 chr5 85564006 85564027 -114066123 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 85564055 85564077 -114066073 + AT_rich Low_complexity Low_complexity 1 22 0 744 298 104 33 chr5 85564648 85565041 -114065109 + L3 LINE CR1 550 970 -607 336 336 173 12 chr5 85565101 85565437 -114064713 + L3 LINE CR1 969 1358 -219 306 287 123 8 chr5 85565898 85566020 -114064130 + MIR SINE MIR 49 184 -78 198 0 0 0 chr5 85566027 85566049 -114064101 + (TA)n Simple_repeat Simple_repeat 2 23 0 2211 234 75 24 chr5 85566420 85567090 -114063060 + L1ME3A LINE L1 5465 6168 -2 1000 88 0 0 chr5 85567510 85567635 -114062515 - AluSq/x SINE Alu -188 125 1 257 196 6 25 chr5 85567660 85567726 -114062424 + MIR SINE MIR 90 141 -67 379 304 10 0 chr5 85572338 85572440 -114057710 + MIR SINE MIR 49 151 -111 693 326 124 49 chr5 85572652 85573468 -114056682 + L1MEd LINE L1 126 1002 -5117 2691 112 0 3 chr5 85575579 85575944 -114054206 - THE1B LTR MaLR 0 364 1 10156 103 37 41 chr5 85575944 85576629 -114053521 - THE1B-int LTR MaLR 0 1580 894 2411 78 0 19 chr5 85576629 85576938 -114053212 - AluY SINE Alu -7 304 2 10156 103 37 41 chr5 85576938 85577838 -114052312 - THE1B-int LTR MaLR -686 894 1 2614 90 0 62 chr5 85577838 85578187 -114051963 - THE1B LTR MaLR 0 364 39 1988 101 4 0 chr5 85578187 85578474 -114051676 + AluSp SINE Alu 29 316 0 2614 90 0 62 chr5 85578474 85578511 -114051639 - THE1B LTR MaLR -325 39 1 210 71 0 0 chr5 85578844 85578872 -114051278 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 2374 109 0 0 chr5 85579623 85579935 -114050215 - AluSx SINE Alu 0 312 1 207 252 97 87 chr5 85580522 85580625 -114049525 + MIR3 SINE MIR 87 190 -18 444 82 0 0 chr5 85580644 85580705 -114049445 + (TG)n Simple_repeat Simple_repeat 2 62 0 1405 134 22 0 chr5 85580753 85580976 -114049174 - L1PA10 LINE L1 -5 6163 5936 306 0 0 0 chr5 85581024 85581057 -114049093 + (CA)n Simple_repeat Simple_repeat 1 67 0 306 0 0 0 chr5 85581057 85581091 -114049059 + (CA)n Simple_repeat Simple_repeat 1 34 0 1198 296 52 43 chr5 85581193 85581312 -114048838 - MLT1J LTR MaLR -57 454 338 715 254 6 12 chr5 85581312 85581477 -114048673 - FRAM SINE Alu -2 164 1 1198 296 52 43 chr5 85581477 85581803 -114048347 - MLT1J LTR MaLR -173 338 5 22 56 0 0 chr5 85582496 85582532 -114047618 + AT_rich Low_complexity Low_complexity 1 36 0 1626 146 0 78 chr5 85582707 85583072 -114047078 + AluJo SINE Alu 6 345 0 1080 252 111 21 chr5 85583321 85583789 -114046361 - L1ME2 LINE L1 0 6164 5655 3017 231 98 26 chr5 85583795 85585332 -114044818 - L1ME1 LINE L1 -5 6441 4771 774 259 38 5 chr5 85585332 85585544 -114044606 + MER20 DNA MER1_type 1 219 0 3017 231 98 26 chr5 85585544 85585622 -114044528 - L1ME1 LINE L1 -1675 4771 4700 1600 240 76 36 chr5 85585626 85586916 -114043234 - L1ME1 LINE L1 -3072 3354 2059 * 2045 224 49 68 chr5 85586914 85587623 -114042527 - L1MD2 LINE L1 -13 6346 5651 773 239 98 5 chr5 85587625 85587830 -114042320 + MER58A DNA MER1_type 1 224 0 2700 230 115 33 chr5 85587842 85588698 -114041452 - L1MD2 LINE L1 -521 5645 4641 1885 143 33 7 chr5 85588698 85588999 -114041151 + AluSq SINE Alu 1 309 -4 2700 230 115 33 chr5 85588999 85589486 -114040664 - L1MD2 LINE L1 -1525 4641 4195 2823 226 66 26 chr5 85589510 85590195 -114039955 + MSTD-int LTR MaLR 1024 1735 0 501 196 0 65 chr5 85590195 85590247 -114039903 + MSTD LTR MaLR 1 44 -352 1860 125 52 68 chr5 85590247 85590616 -114039534 + THE1B LTR MaLR 1 363 -1 501 196 0 65 chr5 85590616 85590670 -114039480 + MSTD LTR MaLR 44 100 -296 763 289 13 4 chr5 85590678 85590917 -114039233 - L1ME1 LINE L1 -4616 1991 1751 183 42 0 0 chr5 85590921 85590945 -114039205 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 17478 47 4 1 chr5 85590981 85593932 -114036218 - L1PA5 LINE L1 -8 6146 3179 10654 81 7 5 chr5 85595016 85598913 -114031237 - L1P LINE L1 -1886 4260 260 675 265 35 45 chr5 85598913 85599200 -114030950 + pTR5 LTR ERV1 745 1028 -1410 4962 107 28 64 chr5 85599386 85600243 -114029907 + LTR12 LTR ERV1 1 826 0 1483 128 56 12 chr5 85600243 85600494 -114029656 - L1P LINE L1 -5881 265 4 277 211 31 86 chr5 85600497 85600625 -114029525 - L1ME1 LINE L1 -4803 1623 1407 1539 231 123 25 chr5 85600661 85601294 -114028856 - L1ME1 LINE L1 -5124 1483 789 1020 154 42 50 chr5 85601984 85602224 -114027926 + L1MA9 LINE L1 6047 6284 -28 499 322 41 0 chr5 85602716 85602887 -114027263 + MIR SINE MIR 26 203 -59 2452 209 74 22 chr5 85604049 85604670 -114025480 - L1MC4a LINE L1 -14 7794 7142 719 232 106 30 chr5 85604668 85604683 -114025467 - L1MC4 LINE L1 -1261 6547 6535 * 1803 151 53 24 chr5 85604683 85605020 -114025130 - MER7A DNA MER2_type 0 346 2 719 232 106 30 chr5 85605020 85605219 -114024931 - L1MC4 LINE L1 -1273 6535 6352 1686 194 114 61 chr5 85605219 85605745 -114024405 - MLT2B3 LTR ERVL 0 554 1 719 232 106 30 chr5 85605745 85606845 -114023305 - L1MC4 LINE L1 -1456 6352 5255 460 294 32 0 chr5 85607456 85607582 -114022568 - MIR SINE MIR -128 134 5 235 150 113 38 chr5 85608510 85608590 -114021560 + L1MA5 LINE L1 6212 6300 0 1020 286 59 10 chr5 85608654 85609042 -114021108 - L1ME LINE L1 -4601 1660 1254 2229 145 3 0 chr5 85609042 85609400 -114020750 - L1PB3 LINE L1 0 6154 5796 351 0 0 0 chr5 85609402 85609441 -114020709 + (TG)n Simple_repeat Simple_repeat 2 40 0 231 200 40 0 chr5 85609549 85609599 -114020551 + MER7A DNA MER2_type 281 332 -4 1655 270 87 56 chr5 85609711 85610045 -114020105 - L1ME LINE L1 -4999 1083 761 2319 67 0 0 chr5 85610045 85610329 -114019821 - AluY SINE Alu -27 284 1 1655 270 87 56 chr5 85610329 85611096 -114019054 - L1ME LINE L1 -5321 761 2 423 277 0 10 chr5 85611718 85611819 -114018331 + L2 LINE L2 3157 3256 -16 261 293 66 28 chr5 85612102 85612208 -114017942 + MIR SINE MIR 8 117 -145 769 186 0 0 chr5 85612280 85612409 -114017741 + FLAM_A SINE Alu 4 132 -1 2941 134 31 15 chr5 85612427 85612920 -114017230 + L1MA8 LINE L1 5733 6236 -55 1800 136 11 4 chr5 85612920 85613193 -114016957 - AluSx SINE Alu -7 305 31 2941 134 31 15 chr5 85613193 85613220 -114016930 + L1MA8 LINE L1 6236 6261 -30 22 56 0 0 chr5 85613256 85613292 -114016858 + AT_rich Low_complexity Low_complexity 1 36 0 263 323 10 10 chr5 85613303 85613399 -114016751 + MIR SINE MIR 153 248 -14 186 286 39 39 chr5 85613494 85613571 -114016579 + MIR SINE MIR 69 145 -117 222 127 32 32 chr5 85613934 85613997 -114016153 + (TAA)n Simple_repeat Simple_repeat 2 64 0 189 0 0 0 chr5 85616062 85616083 -114014067 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 204 40 0 0 chr5 85616783 85616808 -114013342 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2392 82 0 3 chr5 85617487 85617793 -114012357 + AluSg SINE Alu 1 305 -5 1140 181 40 30 chr5 85617851 85618346 -114011804 - L1MD2 LINE L1 0 6359 5820 1460 106 24 0 chr5 85618350 85618558 -114011592 - AluSg/x SINE Alu -16 296 84 971 184 168 4 chr5 85618580 85618830 -114011320 + L1MC/D LINE L1 5263 5553 -806 1109 192 40 0 chr5 85619437 85619661 -114010489 + MER46A DNA MER2_type 4 236 0 180 348 55 39 chr5 85619984 85620165 -114009985 + L2 LINE L2 2794 2977 -337 318 302 94 47 chr5 85621837 85622112 -114008038 + HAL1 LINE L1 95 382 -2125 1088 258 73 21 chr5 85622522 85622988 -114007162 + HAL1 LINE L1 791 1280 -1227 25 0 0 0 chr5 85624324 85624349 -114005801 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 85624373 85624394 -114005756 + AT_rich Low_complexity Low_complexity 1 21 0 533 212 185 7 chr5 85626078 85626224 -114003926 - MIR SINE MIR -22 240 69 2110 100 0 66 chr5 85626247 85626567 -114003583 - AluSq SINE Alu -14 299 1 2052 91 0 7 chr5 85627040 85627315 -114002835 + AluY SINE Alu 22 294 -17 22 35 0 0 chr5 85627315 85627344 -114002806 + AT_rich Low_complexity Low_complexity 1 29 0 2170 115 10 10 chr5 85628038 85628382 -114001768 - AluSx SINE Alu 0 344 1 1312 112 78 8 chr5 85629630 85629872 -114000278 + L1MA9 LINE L1 6054 6312 0 28 0 0 0 chr5 85630097 85630125 -114000025 + AT_rich Low_complexity Low_complexity 1 28 0 5125 83 7 82 chr5 85630609 85631009 -113999141 - L1PA13 LINE L1 -2 6161 5733 2367 112 0 3 chr5 85631009 85631322 -113998828 - AluSx SINE Alu 0 312 1 5125 83 7 82 chr5 85631322 85631592 -113998558 - L1PA13 LINE L1 -430 5733 5444 1997 134 0 41 chr5 85631592 85631912 -113998238 - AluSx SINE Alu -5 307 1 5125 83 7 82 chr5 85631912 85632018 -113998132 - L1PA13 LINE L1 -719 5444 5450 2065 147 0 0 chr5 85632018 85632317 -113997833 - AluSx SINE Alu -13 299 1 5125 83 7 82 chr5 85632317 85632391 -113997759 - L1PA13 LINE L1 -712 5451 5373 284 218 127 73 chr5 85632584 85632749 -113997401 + L1MEd LINE L1 111 284 -5835 322 280 163 44 chr5 85633223 85634041 -113996109 + L1MEd LINE L1 2145 3059 -3070 877 208 82 46 chr5 85635573 85636037 -113994113 - MLT1E3 LTR MaLR -108 546 2 1570 325 78 77 chr5 85638800 85640677 -113989473 - ERVL LTR ERVL -543 4807 2575 620 189 155 40 chr5 85640945 85641093 -113989057 - MER21A LTR ERV1 -72 859 695 1008 157 23 7 chr5 85641213 85641419 -113988731 - THE1B LTR MaLR -146 209 1 3330 126 14 8 chr5 85641419 85641921 -113988229 - THE1B-int LTR MaLR 0 1580 1076 1391 102 0 0 chr5 85641921 85642098 -113988052 - THE1B LTR MaLR -187 177 1 1172 310 68 30 chr5 85642184 85642848 -113987302 + HERV16 LTR ERVL 674 1362 -3634 1605 164 46 74 chr5 85642959 85643326 -113986824 + MER21A LTR ERV1 1 357 -574 24942 45 2 0 chr5 85643442 85646502 -113983648 - L1P LINE L1 -1995 4151 1088 4131 239 14 4 chr5 85646611 85647574 -113982576 + L1P LINE L1 3111 4082 -2064 * 20033 81 5 8 chr5 85647571 85651093 -113979057 + L1P LINE L1 5 3604 -2542 1377 216 19 32 chr5 85701101 85701416 -113928734 + MLT1A1 LTR MaLR 55 365 0 731 301 19 0 chr5 85701499 85701712 -113928438 - HAL1 LINE L1 -950 1557 1341 342 0 0 0 chr5 85701850 85701888 -113928262 + (TG)n Simple_repeat Simple_repeat 1 38 0 465 216 130 97 chr5 85701893 85702162 -113927988 - L1ME LINE L1 -5787 283 6 28 0 0 0 chr5 85702490 85702518 -113927632 + AT_rich Low_complexity Low_complexity 1 28 0 313 191 9 48 chr5 85703811 85703916 -113926234 - L1MA10 LINE L1 -8 6326 6226 338 341 51 9 chr5 85704022 85704236 -113925914 + L1M4 LINE L1 4694 4916 -1230 275 276 69 103 chr5 85704468 85704758 -113925392 - L2 LINE L2 -104 3209 2930 1114 209 126 30 chr5 85704805 85705107 -113925043 - MLT1D LTR MaLR -174 331 1 1459 244 39 62 chr5 85705120 85705637 -113924513 - MLT1D LTR MaLR 0 505 1 237 349 46 0 chr5 85705639 85705748 -113924402 - L2 LINE L2 -388 2926 2813 768 205 77 6 chr5 85705884 85706040 -113924110 + MER3 DNA MER1_type 43 209 0 305 285 24 8 chr5 85706043 85706166 -113923984 - L2 LINE L2 -1518 1796 1672 1263 201 35 28 chr5 85706166 85706447 -113923703 - MLT1E LTR MaLR 0 593 311 702 203 28 0 chr5 85706447 85706590 -113923560 + MLT2D LTR ERVL 1 147 -267 1260 174 28 5 chr5 85706590 85706808 -113923342 - MSTB LTR MaLR 0 426 204 210 383 81 0 chr5 85706829 85707064 -113923086 - L2 LINE L2 -1048 2266 2013 1914 155 3 0 chr5 85707907 85708211 -113921939 + AluSx SINE Alu 1 305 -7 2118 133 30 41 chr5 85709367 85709549 -113920601 + THE1B LTR MaLR 1 178 -186 2184 85 17 10 chr5 85709549 85709844 -113920306 + AluSg SINE Alu 3 299 -11 2118 133 30 41 chr5 85709844 85710029 -113920121 + THE1B LTR MaLR 178 364 0 326 250 10 48 chr5 85710274 85710378 -113919772 + L1MC4 LINE L1 6604 6703 -1339 * 331 261 0 22 chr5 85710349 85710441 -113919709 - L1MC4 LINE L1 -1339 6703 6614 2070 112 7 14 chr5 85710446 85710741 -113919409 - AluSx SINE Alu -19 293 1 1759 148 3 40 chr5 85712052 85712376 -113917774 - AluSx SINE Alu 0 312 1 182 61 0 30 chr5 85712775 85712808 -113917342 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 232 309 0 0 chr5 85712969 85713037 -113917113 + MIR SINE MIR 89 156 -106 26 0 0 0 chr5 85714629 85714655 -113915495 + AT_rich Low_complexity Low_complexity 1 26 0 24 32 0 0 chr5 85714852 85714883 -113915267 + AT_rich Low_complexity Low_complexity 1 31 0 31 26 0 0 chr5 85715234 85715272 -113914878 + AT_rich Low_complexity Low_complexity 1 38 0 789 240 180 35 chr5 85716938 85717304 -113912846 - L3b LINE CR1 -8 1575 1157 29 70 0 0 chr5 85717583 85717640 -113912510 + AT_rich Low_complexity Low_complexity 1 57 0 2281 95 7 0 chr5 85719613 85719917 -113910233 + AluSq SINE Alu 1 306 -7 472 350 0 0 chr5 85720110 85720227 -113909923 - L2 LINE L2 0 3272 3156 254 309 12 0 chr5 85720416 85720500 -113909650 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 206 224 20 0 chr5 85720859 85720908 -113909242 + (TG)n Simple_repeat Simple_repeat 1 50 0 21 0 0 0 chr5 85722426 85722447 -113907703 + AT_rich Low_complexity Low_complexity 1 21 0 22 80 0 0 chr5 85722896 85722946 -113907204 + AT_rich Low_complexity Low_complexity 1 50 0 1348 292 98 36 chr5 85723459 85724229 -113905921 - L2 LINE L2 0 3313 2490 1100 300 43 24 chr5 85724233 85724771 -113905379 - L2 LINE L2 -1227 2087 1449 21 36 0 0 chr5 85724926 85724954 -113905196 + AT_rich Low_complexity Low_complexity 1 28 0 354 23 0 0 chr5 85727011 85727054 -113903096 + (TG)n Simple_repeat Simple_repeat 1 43 0 254 357 0 0 chr5 85728369 85728453 -113901697 - MIR3 SINE MIR -43 165 82 322 217 11 11 chr5 85729048 85729140 -113901010 + L1MB8 LINE L1 -144 4294967243 -6333 806 277 88 7 chr5 85729703 85729977 -113900173 + L1MB8 LINE L1 631 926 -5358 271 300 0 0 chr5 85729989 85730079 -113900071 - L1MC4 LINE L1 -1339 6703 6614 1396 276 51 26 chr5 85730103 85730577 -113899573 + L1MB8 LINE L1 937 1398 -5165 2158 121 3 13 chr5 85730577 85730892 -113899258 + AluSx SINE Alu 1 312 0 1396 276 51 26 chr5 85730892 85731399 -113898751 + L1MB8 LINE L1 1398 2110 -4453 3452 241 20 3 chr5 85731474 85732356 -113897794 + L1MB8 LINE L1 3703 4599 -1783 236 269 0 30 chr5 85732356 85732423 -113897727 + AluSp SINE Alu 123 187 -116 * 343 142 3 33 chr5 85732409 85732480 -113897670 + FLAM_A SINE Alu 68 129 -4 2329 70 3 19 chr5 85732482 85732795 -113897355 + AluY SINE Alu 1 308 -3 3687 233 25 26 chr5 85732806 85732985 -113897165 + L1MB8 LINE L1 4599 4777 -1637 1932 156 0 10 chr5 85732985 85733286 -113896864 + AluJb SINE Alu 1 298 -14 3687 233 25 26 chr5 85733286 85734910 -113895240 + L1MB8 LINE L1 4777 6402 -12 2046 115 0 17 chr5 85735013 85735309 -113894841 + AluSx SINE Alu 11 301 -11 22 0 0 0 chr5 85735989 85736011 -113894139 + AT_rich Low_complexity Low_complexity 1 22 0 1305 32 0 0 chr5 85736011 85736167 -113893983 - L1PA5 LINE L1 -11 6143 5988 1681 180 10 78 chr5 85736838 85737233 -113892917 - MLT1B LTR MaLR 0 390 23 1145 167 52 42 chr5 85737542 85737830 -113892320 + MER33 DNA MER1_type 1 291 -33 219 285 24 24 chr5 85739042 85739165 -113890985 + (CTA)n Simple_repeat Simple_repeat 3 125 0 667 249 41 12 chr5 85739198 85739367 -113890783 - MIR SINE MIR -63 199 26 31 58 0 0 chr5 85739669 85739721 -113890429 + AT_rich Low_complexity Low_complexity 1 52 0 857 257 40 18 chr5 85739784 85740191 -113889959 - L1MEc LINE L1 -3681 2534 2170 2017 186 46 137 chr5 85740498 85740666 -113889484 - L1M4c LINE L1 -3228 3504 3322 1848 179 0 6 chr5 85740666 85740979 -113889171 - AluJb SINE Alu 0 312 2 2017 186 46 137 chr5 85740979 85741598 -113888552 - L1M4c LINE L1 -3410 3322 2789 1587 39 0 3 chr5 85741616 85742000 -113888150 - L1PA5 LINE L1 -2 6152 5708 1231 269 85 30 chr5 85742000 85742691 -113887459 - L1M4c LINE L1 -3939 2793 2065 * 6530 259 22 39 chr5 85742684 85744619 -113885531 - L1 LINE L1 -4794 1859 2 278 336 8 0 chr5 85744798 85744923 -113885227 - L1M4c LINE L1 -5029 1705 1541 459 286 135 0 chr5 85745537 85745722 -113884428 - MLT1L LTR MaLR -5 610 401 258 218 0 0 chr5 85746863 85746918 -113883232 - MER116 DNA Mariner -25 55 1 27 49 0 0 chr5 85747592 85747633 -113882517 + AT_rich Low_complexity Low_complexity 1 41 0 409 280 134 52 chr5 85749870 85750102 -113880048 - MIR SINE MIR -6 256 6 21 0 0 0 chr5 85750637 85750658 -113879492 + AT_rich Low_complexity Low_complexity 1 21 0 2131 116 0 47 chr5 85750702 85751020 -113879130 + AluSx SINE Alu 1 303 -9 305 338 40 34 chr5 85751078 85751226 -113878924 + MIR3 SINE MIR 43 191 -17 291 157 0 0 chr5 85751454 85751505 -113878645 + (TTTA)n Simple_repeat Simple_repeat 1 51 0 646 221 87 0 chr5 85751506 85751655 -113878495 - FAM SINE Alu -23 162 1 28 29 0 0 chr5 85752015 85752050 -113878100 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 85752087 85752111 -113878039 + AT_rich Low_complexity Low_complexity 1 24 0 1914 171 0 3 chr5 85752148 85752458 -113877692 + AluJb SINE Alu 1 309 -3 7988 162 15 20 chr5 85752480 85754980 -113875170 + L1MA4 LINE L1 3809 6296 -4 26 64 0 0 chr5 85754996 85755043 -113875107 + AT_rich Low_complexity Low_complexity 1 47 0 316 218 136 36 chr5 85755140 85755250 -113874900 - AluJo SINE Alu -70 232 112 25 83 0 0 chr5 85755645 85755705 -113874445 + AT_rich Low_complexity Low_complexity 1 60 0 299 392 39 26 chr5 85756226 85756379 -113873771 - L2 LINE L2 -16 3256 3102 200 188 24 118 chr5 85756545 85756630 -113873520 - L2 LINE L2 -264 3008 2932 2475 58 0 0 chr5 85756646 85756941 -113873209 + AluY SINE Alu 1 295 -16 1677 155 0 53 chr5 85756978 85757282 -113872868 + AluJo SINE Alu 5 292 -20 1971 121 7 23 chr5 85758052 85758357 -113871793 + AluSx SINE Alu 1 300 -12 239 203 34 0 chr5 85758652 85758709 -113871441 + MER112 DNA MER1_type 9 67 -193 2463 121 19 87 chr5 85758709 85759180 -113870970 - Tigger2 DNA MER2_type 0 2718 2280 379 155 0 0 chr5 85759191 85759249 -113870901 - Tigger2 DNA MER2_type -2656 62 5 315 0 0 0 chr5 85759262 85759297 -113870853 + (TG)n Simple_repeat Simple_repeat 2 36 0 1045 156 0 17 chr5 85759532 85759711 -113870439 - FRAM SINE Alu -1 175 1 493 264 219 6 chr5 85759870 85760048 -113870102 - MIR SINE MIR -2 260 45 1560 189 81 14 chr5 85760357 85760716 -113869434 - MLT1B LTR MaLR 0 390 8 21 36 0 0 chr5 85761174 85761202 -113868948 + AT_rich Low_complexity Low_complexity 1 28 0 535 315 144 27 chr5 85761285 85761952 -113868198 - L1MEc LINE L1 -5532 864 120 213 279 10 96 chr5 85762401 85762505 -113867645 + L3 LINE CR1 552 646 -931 757 194 0 0 chr5 85764380 85764514 -113865636 + MER1B DNA MER1_type 1 134 -163 565 111 0 44 chr5 85764513 85764603 -113865547 + MER1B DNA MER1_type 244 329 0 * 25 51 0 0 chr5 85767002 85767041 -113863109 + AT_rich Low_complexity Low_complexity 1 39 0 419 300 0 0 chr5 85767528 85767638 -113862512 - L2 LINE L2 -7 3306 3197 190 162 54 0 chr5 85768229 85768266 -113861884 + L2 LINE L2 3274 3312 -1 2282 78 30 0 chr5 85768352 85768647 -113861503 + AluSg SINE Alu 1 304 -6 22 94 0 0 chr5 85769683 85769747 -113860403 + AT_rich Low_complexity Low_complexity 1 64 0 247 238 163 12 chr5 85769792 85769872 -113860278 - MIR SINE MIR -137 125 34 210 393 0 0 chr5 85770321 85770433 -113859717 - L2 LINE L2 -457 2857 2746 189 0 0 0 chr5 85770435 85770456 -113859694 + (TTGG)n Simple_repeat Simple_repeat 2 22 0 210 118 0 0 chr5 85770587 85770621 -113859529 + (TG)n Simple_repeat Simple_repeat 2 35 0 201 167 0 0 chr5 85771174 85771210 -113858940 + T-rich Low_complexity Low_complexity 1 36 0 2341 101 0 0 chr5 85771906 85772214 -113857936 + AluSq SINE Alu 3 310 -3 22 0 0 0 chr5 85773501 85773523 -113856627 + AT_rich Low_complexity Low_complexity 1 22 0 583 267 34 6 chr5 85773947 85774123 -113856027 + MIR SINE MIR 80 260 -2 6929 62 5 2 chr5 85774377 85775296 -113854854 + L1PA7 LINE L1 5230 6150 -4 1450 206 61 13 chr5 85776576 85776970 -113853180 + Charlie1 DNA MER1_type 2343 2755 -6 330 311 0 22 chr5 85777463 85777553 -113852597 - L2 LINE L2 -36 3236 3149 511 228 11 0 chr5 85778732 85778824 -113851326 + MIR3 SINE MIR 88 180 -28 429 285 22 15 chr5 85779200 85779337 -113850813 - MIR SINE MIR -49 213 76 28 0 0 0 chr5 85779689 85779717 -113850433 + AT_rich Low_complexity Low_complexity 1 28 0 7707 20 0 0 chr5 85779942 85781088 -113849062 - L1PA2 LINE L1 0 6155 5011 23 54 0 0 chr5 85781517 85781554 -113848596 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 85781576 85781604 -113848546 + AT_rich Low_complexity Low_complexity 1 28 0 368 244 41 24 chr5 85781617 85781740 -113848410 - L1ME4a LINE L1 0 6121 5997 229 179 54 18 chr5 85782002 85782058 -113848092 - L1ME LINE L1 -538 5583 5526 24 32 0 0 chr5 85783458 85783489 -113846661 + AT_rich Low_complexity Low_complexity 1 31 0 627 270 149 40 chr5 85784485 85784833 -113845317 + MLT1J LTR MaLR 72 457 -54 197 333 104 59 chr5 85785057 85785279 -113844871 - L2 LINE L2 -530 2784 2553 322 301 0 0 chr5 85786369 85786452 -113843698 - L2 LINE L2 -28 3285 3203 591 314 70 51 chr5 85786858 85786896 -113843254 + L2 LINE L2 2393 2429 -885 3466 103 39 16 chr5 85786896 85787411 -113842739 - MER1A DNA MER1_type 0 527 1 591 314 70 51 chr5 85787411 85787744 -113842406 + L2 LINE L2 2429 2771 -543 192 77 0 0 chr5 85787868 85787894 -113842256 + (TA)n Simple_repeat Simple_repeat 2 27 0 1475 117 0 0 chr5 85787894 85788090 -113842060 - AluSg/x SINE Alu -20 290 95 229 337 62 49 chr5 85789237 85789480 -113840670 - L3 LINE CR1 -320 1257 1012 6709 73 13 5 chr5 85789519 85791024 -113839126 - L1PA8 LINE L1 -12 6160 4650 331 259 247 0 chr5 85791082 85791240 -113838910 + MIR SINE MIR 59 255 -7 872 290 158 61 chr5 85791512 85792397 -113837753 - L2 LINE L2 -3 3310 2315 2704 0 0 3 chr5 85792397 85792695 -113837455 - AluYa5 SINE Alu -14 297 1 872 290 158 61 chr5 85792695 85792859 -113837291 - L2 LINE L2 -998 2315 2168 980 188 35 52 chr5 85793119 85793407 -113836743 + Tigger5 DNA MER2_type 1 2230 -93 2236 164 5 23 chr5 85793407 85793796 -113836354 + MSTC LTR MaLR 1 382 -46 376 152 30 0 chr5 85794024 85794090 -113836060 + Tigger5 DNA MER2_type 2255 2322 -1 823 242 47 17 chr5 85794298 85794659 -113835491 + MLT1I LTR MaLR 1 406 -3 830 171 19 32 chr5 85795476 85795634 -113834516 - MSTD LTR MaLR 0 396 241 1971 113 3 50 chr5 85795803 85796121 -113834029 + AluSx SINE Alu 1 303 -9 32 0 0 0 chr5 85796122 85796154 -113833996 + AT_rich Low_complexity Low_complexity 1 32 0 253 61 20 20 chr5 85796154 85796203 -113833947 + (TATAA)n Simple_repeat Simple_repeat 1 49 0 180 0 0 0 chr5 85796438 85796458 -113833692 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 716 178 32 16 chr5 85797725 85797908 -113832242 - MLT1A1 LTR MaLR -215 150 1 213 366 21 21 chr5 85798187 85798280 -113831870 + MIR3 SINE MIR 1 93 -115 292 286 124 22 chr5 85798339 85798517 -113831633 + L2 LINE L2 2639 2834 -480 276 319 71 18 chr5 85798677 85798790 -113831360 + MER102b DNA MER1_type 187 305 -36 441 250 196 0 chr5 85799319 85799467 -113830683 + L1ME LINE L1 5596 5772 -349 2304 71 3 0 chr5 85799661 85799967 -113830183 + AluY SINE Alu 1 307 0 332 161 97 65 chr5 85800033 85800157 -113829993 + L1ME4a LINE L1 5994 6121 0 276 239 275 14 chr5 85800307 85800445 -113829705 - MIR3 SINE MIR -26 182 9 225 0 0 0 chr5 85801152 85801177 -113828973 + (A)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr5 85801603 85801624 -113828526 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 85801969 85802006 -113828144 + AT_rich Low_complexity Low_complexity 1 37 0 1966 144 12 3 chr5 85803547 85803866 -113826284 - MLT2C1 LTR ERVL -75 322 1 2450 224 64 18 chr5 85804820 85805584 -113824566 - L1MEd LINE L1 -2923 3206 2408 4241 212 52 18 chr5 85805598 85807321 -113822829 - L1MCb LINE L1 -4740 1824 40 34 89 0 0 chr5 85807466 85807556 -113822594 + AT_rich Low_complexity Low_complexity 1 90 0 328 317 72 24 chr5 85808287 85808454 -113821696 + MIR3 SINE MIR 30 204 -4 189 107 0 0 chr5 85808967 85808995 -113821155 + (TGGA)n Simple_repeat Simple_repeat 3 30 0 23 54 0 0 chr5 85808997 85809034 -113821116 + AT_rich Low_complexity Low_complexity 1 37 0 336 64 0 0 chr5 85809040 85809087 -113821063 + (TG)n Simple_repeat Simple_repeat 2 48 0 22 70 0 0 chr5 85810118 85810161 -113819989 + AT_rich Low_complexity Low_complexity 1 43 0 222 191 0 0 chr5 85810516 85810563 -113819587 + T-rich Low_complexity Low_complexity 1 47 0 236 270 68 88 chr5 85810736 85810884 -113819266 + L2 LINE L2 3169 3313 0 398 264 108 0 chr5 85812182 85812311 -113817839 + MER103 DNA DNA 17 159 -7 382 335 105 17 chr5 85812493 85812789 -113817361 - L2 LINE L2 -99 3214 2893 237 196 0 0 chr5 85812802 85812853 -113817297 + (CA)n Simple_repeat Simple_repeat 2 52 0 691 298 25 13 chr5 85812868 85813103 -113817047 - L2 LINE L2 -481 2833 2596 28 0 0 0 chr5 85813673 85813701 -113816449 + AT_rich Low_complexity Low_complexity 1 28 0 505 299 142 19 chr5 85813729 85813997 -113816153 + L1M4 LINE L1 3119 3419 -2727 296 313 25 6 chr5 85814135 85814295 -113815855 + L1M4 LINE L1 3657 3819 -2327 22 35 0 0 chr5 85814716 85814745 -113815405 + AT_rich Low_complexity Low_complexity 1 29 0 334 308 0 0 chr5 85815157 85815248 -113814902 - MIR SINE MIR -105 157 67 530 262 56 28 chr5 85815535 85815787 -113814363 - L1MEd LINE L1 -3712 2417 2159 799 295 73 38 chr5 85816161 85817174 -113812976 - L1MEd LINE L1 -4653 1657 561 318 26 0 0 chr5 85817642 85817681 -113812469 + (TG)n Simple_repeat Simple_repeat 2 40 0 6960 48 9 1 chr5 85817686 85819093 -113811057 - L1PA7 LINE L1 0 6154 4740 4384 119 34 0 chr5 85819095 85819751 -113810399 - L1P3 LINE L1 -5776 685 8 597 257 27 0 chr5 85819856 85820004 -113810146 - MIR SINE MIR 0 262 111 2367 92 0 0 chr5 85820035 85820338 -113809812 + AluSx SINE Alu 1 303 -9 1103 113 38 0 chr5 85821282 85821442 -113808708 - AluSg/x SINE Alu -10 302 137 953 152 84 0 chr5 85822206 85822384 -113807766 - L1MC2 LINE L1 -12 6332 6140 268 214 143 32 chr5 85822477 85822603 -113807547 + MER103 DNA DNA 8 147 -19 186 191 0 0 chr5 85823317 85823359 -113806791 + (CATA)n Simple_repeat Simple_repeat 3 44 0 212 113 75 38 chr5 85823965 85824018 -113806132 + (CAGAA)n Simple_repeat Simple_repeat 5 59 0 2231 90 40 0 chr5 85826107 85826406 -113803744 + AluY SINE Alu 1 311 0 189 0 0 0 chr5 85826407 85826428 -113803722 + (TA)n Simple_repeat Simple_repeat 1 21 0 2445 33 27 10 chr5 85826586 85826886 -113803264 + AluY SINE Alu 1 305 -6 196 241 56 0 chr5 85827122 85827176 -113802974 - L2 LINE L2 -73 3240 3184 21 0 0 0 chr5 85827569 85827590 -113802560 + AT_rich Low_complexity Low_complexity 1 21 0 1827 219 28 34 chr5 85827713 85828221 -113801929 + MLT1D LTR MaLR 1 505 0 1403 156 21 17 chr5 85828324 85828613 -113801537 + L1MA4 LINE L1 6007 6296 -4 546 139 82 0 chr5 85828614 85828736 -113801414 + Charlie2 DNA MER1_type 2366 2497 -365 23 48 0 48 chr5 85828942 85829005 -113801145 + AT_rich Low_complexity Low_complexity 1 60 0 222 118 0 0 chr5 85830165 85830199 -113799951 + (T)n Simple_repeat Simple_repeat 1 34 0 537 98 0 12 chr5 85830613 85830695 -113799455 + Tigger1 DNA MER2_type 1230 1310 -1108 560 293 122 14 chr5 85830695 85830989 -113799161 + L2 LINE L2 2846 3171 -142 27 0 0 0 chr5 85831130 85831157 -113798993 + AT_rich Low_complexity Low_complexity 1 27 0 11177 139 37 1 chr5 85831589 85833391 -113796759 + Tigger1 DNA MER2_type 1 1868 -550 27896 22 0 0 chr5 85833391 85837474 -113792676 + L1PA2 LINE L1 2073 6155 0 31 0 0 0 chr5 85837474 85837505 -113792645 + AT_rich Low_complexity Low_complexity 1 31 0 3117 159 19 22 chr5 85837505 85837908 -113792242 + Tigger1 DNA MER2_type 1838 2240 -178 2167 107 3 0 chr5 85837908 85838198 -113791952 - AluSg SINE Alu -5 305 15 3117 159 19 22 chr5 85838198 85838377 -113791773 + Tigger1 DNA MER2_type 2240 2418 0 318 306 36 45 chr5 85839493 85839569 -113790581 - L2 LINE L2 -27 3245 3169 1567 211 79 55 chr5 85839569 85840062 -113790088 + MLT1D LTR MaLR 1 505 0 318 306 36 45 chr5 85840062 85840096 -113790054 - L2 LINE L2 -103 3169 3136 5141 90 16 9 chr5 85842394 85843127 -113787023 - L1PA11 LINE L1 0 6174 5437 2117 157 0 3 chr5 85843128 85843505 -113786645 - L1PA11 LINE L1 -765 5381 5006 241 88 0 0 chr5 85843527 85843561 -113786589 - L1PA11 LINE L1 -2169 3977 3944 1547 191 98 11 chr5 85844161 85844538 -113785612 - L1ME1 LINE L1 0 6166 5757 668 186 60 0 chr5 85844595 85844762 -113785388 + L1MA9 LINE L1 6135 6311 -1 569 276 30 38 chr5 85844963 85845086 -113785064 + L1ME LINE L1 4083 4205 -1941 2887 46 6 0 chr5 85845086 85845437 -113784713 - THE1A LTR MaLR -2 353 1 569 276 30 38 chr5 85845437 85845578 -113784572 + L1ME LINE L1 4205 4345 -1801 1050 269 79 45 chr5 85845741 85846040 -113784110 + L1ME LINE L1 4628 4916 -1230 655 203 0 43 chr5 85846040 85846178 -113783972 - FLAM_A SINE Alu -1 132 1 1050 269 79 45 chr5 85846178 85846629 -113783521 + L1ME LINE L1 4916 5403 -743 1445 236 137 26 chr5 85846630 85847176 -113782974 + L1MC4 LINE L1 7280 7886 -156 265 323 10 0 chr5 85847252 85847351 -113782799 + L1ME LINE L1 5465 5564 -600 484 252 7 29 chr5 85848504 85848643 -113781507 + L1ME4a LINE L1 5497 5632 -532 369 0 0 0 chr5 85849331 85849372 -113780778 + (CA)n Simple_repeat Simple_repeat 2 42 0 203 318 27 82 chr5 85849849 85849959 -113780191 - L2 LINE L2 -219 3053 2950 * 297 266 80 18 chr5 85849955 85850068 -113780082 + MIR SINE MIR 23 142 -66 2344 94 0 0 chr5 85850875 85851172 -113778978 - AluSg SINE Alu -13 297 1 473 286 86 57 chr5 85851586 85851922 -113778228 + L1ME4a LINE L1 5776 6121 0 26 0 0 0 chr5 85852313 85852339 -113777811 + AT_rich Low_complexity Low_complexity 1 26 0 284 333 163 0 chr5 85852667 85852802 -113777348 + L2 LINE L2 3116 3272 0 1046 246 101 37 chr5 85854391 85854891 -113775259 + MLT1G LTR MaLR 12 590 0 243 349 46 51 chr5 85855016 85855211 -113774939 - L2 LINE L2 -210 3062 2869 23 54 0 0 chr5 85855595 85855632 -113774518 + AT_rich Low_complexity Low_complexity 1 37 0 21 71 0 0 chr5 85856254 85856296 -113773854 + AT_rich Low_complexity Low_complexity 1 42 0 1976 82 0 11 chr5 85856464 85856743 -113773407 + L1PA7 LINE L1 5878 6153 -1 438 185 0 49 chr5 85856800 85856881 -113773269 - MER45 DNA AcHobo -90 88 12 256 277 15 0 chr5 85857027 85857092 -113773058 + L2 LINE L2 3230 3295 -18 1617 194 38 127 chr5 85857374 85857927 -113772223 + MLT1D LTR MaLR 2 505 0 245 239 56 0 chr5 85858419 85858490 -113771660 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 224 243 29 186 chr5 85858779 85858919 -113771231 + MIR SINE MIR 3 120 -142 310 296 114 62 chr5 85860717 85861102 -113769048 + L2 LINE L2 2013 2417 -897 297 0 0 0 chr5 85861242 85861275 -113768875 + (CA)n Simple_repeat Simple_repeat 1 33 0 1289 268 105 17 chr5 85861301 85861358 -113768792 - L1ME3A LINE L1 -220 5950 5899 1525 147 3 101 chr5 85861358 85861665 -113768485 - AluJo SINE Alu -22 290 14 1289 268 105 17 chr5 85861665 85862190 -113767960 - L1ME3A LINE L1 -271 5899 5317 538 281 86 8 chr5 85862210 85862477 -113767673 - L1ME3A LINE L1 -863 5283 4996 186 103 0 0 chr5 85863060 85863089 -113767061 + (TG)n Simple_repeat Simple_repeat 2 30 0 201 250 0 36 chr5 85863289 85863345 -113766805 - L2 LINE L2 -2 3270 3217 270 287 103 0 chr5 85863377 85863464 -113766686 - MIR3 SINE MIR -24 184 89 2214 128 122 8 chr5 85864396 85864780 -113765370 - MSTA LTR MaLR 0 428 1 8237 171 88 4 chr5 85864786 85866292 -113763858 - MSTA-int LTR MaLR -6 1645 14 730 132 12 2 chr5 85866305 85866436 -113763714 - MSTA LTR MaLR -225 139 1 213 224 20 20 chr5 85866592 85866641 -113763509 - L2 LINE L2 -5 3267 3219 5922 110 32 23 chr5 85866875 85868071 -113762079 - L1PA16 LINE L1 -9 6157 4951 1550 170 189 8 chr5 85868071 85868430 -113761720 + MSTB LTR MaLR 3 426 0 5922 110 32 23 chr5 85868430 85868511 -113761639 - L1PA16 LINE L1 -1215 4951 4872 463 333 43 11 chr5 85869117 85869303 -113760847 - MIR SINE MIR -50 212 21 980 289 144 83 chr5 85871100 85872570 -113757580 + L2 LINE L2 1792 3313 0 1817 146 11 4 chr5 85872747 85873047 -113757103 - AluSx SINE Alu 0 302 1 30 45 0 0 chr5 85873197 85873241 -113756909 + AT_rich Low_complexity Low_complexity 1 44 0 235 241 0 0 chr5 85873407 85873465 -113756685 + (TA)n Simple_repeat Simple_repeat 1 58 0 193 345 0 0 chr5 85874193 85874248 -113755902 - L2 LINE L2 -5 3267 3213 355 288 72 0 chr5 85874274 85874385 -113755765 - L2 LINE L2 -4 3309 3191 22 35 0 0 chr5 85876944 85876973 -113753177 + AT_rich Low_complexity Low_complexity 1 29 0 535 245 156 86 chr5 85877633 85878017 -113752133 + MLT1H LTR MaLR 138 548 -1 273 331 86 14 chr5 85878116 85878291 -113751859 + MIR SINE MIR 11 239 -23 1521 128 21 0 chr5 85878720 85878954 -113751196 - AluSq SINE Alu 0 313 75 207 0 0 0 chr5 85879404 85879427 -113750723 + (A)n Simple_repeat Simple_repeat 1 23 0 353 267 78 100 chr5 85880039 85880219 -113749931 - L2 LINE L2 -18 3254 3079 539 156 10 0 chr5 85883350 85883446 -113746704 + MSTD LTR MaLR 289 385 -11 1146 312 107 18 chr5 85883453 85884226 -113745924 + L2 LINE L2 2460 3311 -2 210 239 22 0 chr5 85884767 85884813 -113745337 + L2 LINE L2 1881 1927 -1387 1264 112 0 22 chr5 85884822 85885001 -113745149 - AluSq SINE Alu -138 175 1 326 319 145 5 chr5 85885269 85885476 -113744674 + MIR SINE MIR 8 243 -19 4756 127 7 5 chr5 85886351 85887093 -113743057 - L1PA16 LINE L1 -2 6164 5422 433 361 53 70 chr5 85888115 85888530 -113741620 + L2 LINE L2 2811 3218 -54 365 314 62 44 chr5 85888572 85888846 -113741304 - L2 LINE L2 -1278 2036 1758 23 0 0 0 chr5 85889286 85889309 -113740841 + AT_rich Low_complexity Low_complexity 1 23 0 1045 210 65 73 chr5 85890663 85891048 -113739102 - MER113 DNA MER1_type? -54 467 86 2022 128 53 36 chr5 85891272 85891630 -113738520 + THE1B LTR MaLR 1 364 0 331 285 31 39 chr5 85895055 85895185 -113734965 + L1ME LINE L1 5476 5604 -517 825 282 68 19 chr5 85895407 85895716 -113734434 - LTR33A LTR ERVL -160 363 40 915 129 0 21 chr5 85896484 85896624 -113733526 + FLAM_C SINE Alu 1 137 -6 711 280 118 12 chr5 85896630 85897055 -113733095 + HAL1 LINE L1 993 1462 -1045 317 236 157 39 chr5 85897909 85898087 -113732063 + HAL1b LINE L1 746 944 -404 290 262 283 14 chr5 85898087 85898232 -113731918 + MER5A DNA MER1_type 4 187 -2 367 230 37 131 chr5 85898243 85898434 -113731716 + MER5B DNA MER1_type 2 174 -4 310 320 52 13 chr5 85898646 85898799 -113731351 + L1ME LINE L1 5617 5775 -346 1447 271 62 38 chr5 85898874 85899373 -113730777 + MLT1J LTR MaLR 1 511 0 8251 222 41 25 chr5 85899449 85899818 -113730332 + L1MB2 LINE L1 2573 2935 -3236 2058 112 3 14 chr5 85899818 85900114 -113730036 + AluSq SINE Alu 3 295 -18 8251 222 41 25 chr5 85900114 85900652 -113729498 + L1MB2 LINE L1 2935 3463 -2708 2821 13 0 0 chr5 85900652 85900961 -113729189 + AluYa5 SINE Alu 1 309 -2 8251 222 41 25 chr5 85900961 85903534 -113726616 + L1MB2 LINE L1 3463 6167 -4 1268 26 7 0 chr5 85903583 85903737 -113726413 + L1PA4 LINE L1 5997 6151 -4 28 0 0 0 chr5 85903860 85903888 -113726262 + AT_rich Low_complexity Low_complexity 1 28 0 284 106 0 0 chr5 85905234 85905281 -113724869 - AluSc SINE Alu -1 298 252 233 197 15 0 chr5 85905384 85905450 -113724700 + GA-rich Low_complexity Low_complexity 3 69 0 22 35 0 0 chr5 85905663 85905692 -113724458 + AT_rich Low_complexity Low_complexity 1 29 0 377 189 40 0 chr5 85906765 85906839 -113723311 + L2 LINE L2 3237 3313 0 628 284 42 38 chr5 85906937 85907198 -113722952 - MIR SINE MIR 0 262 1 418 243 81 32 chr5 85907407 85907592 -113722558 + L1MD3 LINE L1 5636 5829 -1979 400 338 32 13 chr5 85908124 85908278 -113721872 + MIR SINE MIR 3 159 -103 28 61 0 0 chr5 85908506 85908555 -113721595 + AT_rich Low_complexity Low_complexity 1 49 0 198 0 0 0 chr5 85908984 85909006 -113721144 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 434 369 75 14 chr5 85909486 85909600 -113720550 + L2 LINE L2 2973 3079 -193 1311 215 151 43 chr5 85909600 85910069 -113720081 - MLT2B1 LTR ERVL 0 520 1 434 369 75 14 chr5 85910069 85910233 -113719917 + L2 LINE L2 3079 3268 -4 4675 194 130 126 chr5 85910346 85911423 -113718727 + L1MD3 LINE L1 5826 6898 -1097 6086 141 66 32 chr5 85911423 85911706 -113718444 - Tigger3b DNA MER2_type -1798 1230 958 2267 101 0 3 chr5 85911706 85912003 -113718147 - AluSx SINE Alu -15 297 2 6086 141 66 32 chr5 85912003 85912908 -113717242 - Tigger3b DNA MER2_type -2070 958 1 4675 194 130 126 chr5 85912908 85913004 -113717146 + L1MD3 LINE L1 6898 6992 -1003 2290 102 3 0 chr5 85913004 85913308 -113716842 + AluSp SINE Alu 1 305 -8 4675 194 130 126 chr5 85913308 85913626 -113716524 + L1MD3 LINE L1 6992 7307 -688 540 151 179 9 chr5 85913626 85913732 -113716418 + MLT1F1 LTR MaLR 2 125 -442 4675 194 130 126 chr5 85913732 85914285 -113715865 + L1MD3 LINE L1 7307 7984 -11 656 326 69 45 chr5 85914300 85914412 -113715738 - LTR67 LTR ERVL -75 482 374 1706 160 57 24 chr5 85914412 85914743 -113715407 + MER2 DNA MER2_type 1 342 -2 656 326 69 45 chr5 85914743 85915093 -113715057 - LTR67 LTR ERVL -183 374 9 189 171 0 0 chr5 85915344 85915379 -113714771 + A-rich Low_complexity Low_complexity 1 35 0 7583 26 1 0 chr5 85915507 85917075 -113713075 + L1PA4 LINE L1 4584 6152 -3 592 296 82 0 chr5 85918041 85918247 -113711903 - MIR SINE MIR -3 259 37 461 321 206 4 chr5 85918588 85918831 -113711319 - MLT1J2 LTR MaLR -44 406 115 34 0 0 0 chr5 85919302 85919336 -113710814 + AT_rich Low_complexity Low_complexity 1 34 0 703 217 124 12 chr5 85919639 85919800 -113710350 + MIR SINE MIR 16 194 -68 245 184 0 20 chr5 85919790 85919839 -113710311 - MIR SINE MIR -67 195 148 * 272 297 0 14 chr5 85919840 85919914 -113710236 + MIR SINE MIR 189 261 -1 1226 208 24 48 chr5 85920131 85920453 -113709697 + AluJo SINE Alu 1 315 0 250 208 21 0 chr5 85920468 85920516 -113709634 - L2 LINE L2 -4 3309 3261 546 255 51 41 chr5 85920518 85920714 -113709436 + MIR SINE MIR 65 262 0 23 0 0 0 chr5 85920809 85920832 -113709318 + AT_rich Low_complexity Low_complexity 1 23 0 294 266 46 69 chr5 85920880 85921053 -113709097 - MER112 DNA MER1_type -86 174 6 518 254 127 52 chr5 85922225 85922438 -113707712 + MIR SINE MIR 19 247 -15 431 346 22 27 chr5 85922689 85922874 -113707276 + MIR SINE MIR 64 247 -15 652 274 19 24 chr5 85923826 85924038 -113706112 - MIR SINE MIR 0 262 52 6847 140 45 2 chr5 85924167 85925347 -113704803 - Tigger3b DNA MER2_type 0 1231 1 272 282 24 24 chr5 85926022 85926146 -113704004 + MLT1L LTR MaLR 474 597 -18 23783 132 24 16 chr5 85926172 85931033 -113699117 + L1PA10 LINE L1 1287 6164 -4 221 222 0 0 chr5 85932814 85932859 -113697291 - MIR SINE MIR -121 141 97 383 164 14 27 chr5 85932881 85932954 -113697196 + MER58C DNA MER1_type 1 72 -143 317 293 0 0 chr5 85932984 85933066 -113697084 - L1MC4 LINE L1 -1347 6695 6614 314 245 0 82 chr5 85932990 85933088 -113697062 + L1MC4 LINE L1 6614 6703 -1339 * 548 230 0 0 chr5 85933119 85933219 -113696931 + MER58C DNA MER1_type 116 215 0 1168 259 47 45 chr5 85933222 85933604 -113696546 - MLT1I LTR MaLR -14 395 13 379 125 0 0 chr5 85933775 85933831 -113696319 + THE1C LTR MaLR 1 56 -372 1097 104 52 36 chr5 85933836 85934029 -113696121 + THE1C LTR MaLR 180 375 0 324 237 32 13 chr5 85934044 85934200 -113695950 + (TA)n Simple_repeat Simple_repeat 2 160 0 23 54 0 0 chr5 85934598 85934635 -113695515 + AT_rich Low_complexity Low_complexity 1 37 0 241 308 0 15 chr5 85934825 85934890 -113695260 - MIR3 SINE MIR -18 190 127 193 303 13 53 chr5 85937999 85938075 -113692075 - L2 LINE L2 0 3313 3241 706 325 60 74 chr5 85938085 85938596 -113691554 + L2 LINE L2 2474 2991 -281 1980 126 75 29 chr5 85938596 85938944 -113691206 + THE1B LTR MaLR 1 364 0 706 325 60 74 chr5 85938944 85939037 -113691113 + L2 LINE L2 2991 3084 -188 2074 160 119 13 chr5 85939037 85939424 -113690726 + MSTA LTR MaLR 1 428 0 706 325 60 74 chr5 85939424 85939630 -113690520 + L2 LINE L2 3084 3272 0 779 152 64 0 chr5 85940531 85940656 -113689494 + FLAM_C SINE Alu 1 133 0 290 321 43 50 chr5 85940948 85941250 -113688900 + L1MCc LINE L1 153 452 -5971 569 324 35 9 chr5 85941602 85941945 -113688205 + L1MCc LINE L1 1129 1480 -4943 550 306 96 7 chr5 85942019 85942499 -113687651 - L1ME3A LINE L1 -281 6283 5741 308 268 0 0 chr5 85942510 85942592 -113687558 - L1ME3A LINE L1 -846 5694 5613 816 288 68 14 chr5 85942599 85943023 -113687127 - L1ME3A LINE L1 -4484 2237 1791 337 259 54 0 chr5 85943012 85943124 -113687026 - L1ME3A LINE L1 -4670 1870 1753 * 225 289 13 0 chr5 85943154 85943230 -113686920 - L1ME3A LINE L1 -4982 1548 1472 559 287 150 10 chr5 85943255 85943555 -113686595 - L1ME3A LINE L1 -6031 690 349 2208 123 3 0 chr5 85944364 85944664 -113685486 + AluSx SINE Alu 1 301 -11 2253 108 0 0 chr5 85944904 85945199 -113684951 - AluSg SINE Alu -15 295 1 1659 195 6 10 chr5 85946110 85946423 -113683727 - AluJo SINE Alu 0 312 1 248 366 23 42 chr5 85947307 85947483 -113682667 + MIR3 SINE MIR 29 201 -7 297 0 0 0 chr5 85948894 85948927 -113681223 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 1087 227 107 39 chr5 85949683 85950114 -113680036 + MLT1C LTR MaLR 8 467 0 1196 186 33 102 chr5 85950119 85950511 -113679639 - MLT1A1 LTR MaLR 0 365 1 2386 85 3 0 chr5 85950768 85951062 -113679088 + AluSp SINE Alu 1 295 -18 199 211 0 70 chr5 85951471 85951528 -113678622 + L2 LINE L2 3261 3313 0 2088 113 0 48 chr5 85951549 85951860 -113678290 - AluSq SINE Alu -17 296 1 783 226 67 57 chr5 85951999 85952296 -113677854 - MER102b DNA MER1_type -15 326 27 318 292 26 26 chr5 85952607 85952720 -113677430 + MIR SINE MIR 94 206 -56 261 83 0 0 chr5 85953143 85953179 -113676971 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 202 278 19 0 chr5 85953186 85953240 -113676910 - L2 LINE L2 -20 3252 3198 27 62 0 0 chr5 85954283 85954331 -113675819 + AT_rich Low_complexity Low_complexity 1 48 0 2346 82 3 3 chr5 85954428 85954731 -113675419 - AluY SINE Alu -4 307 5 4503 83 25 43 chr5 85954943 85955619 -113674531 + SVA Other Other 723 1386 0 2147 128 0 3 chr5 85955903 85956209 -113673941 - AluSx SINE Alu -7 305 1 207 0 0 0 chr5 85956876 85956899 -113673251 + (CA)n Simple_repeat Simple_repeat 2 24 0 265 242 21 11 chr5 85957222 85957317 -113672833 + (TA)n Simple_repeat Simple_repeat 2 97 0 343 292 6 56 chr5 85957317 85957495 -113672655 + L1ME4a LINE L1 5897 6065 -56 652 196 27 14 chr5 85957773 85957920 -113672230 - MER63A DNA MER1_type 0 210 62 563 186 0 0 chr5 85957920 85958017 -113672133 - Tigger7 DNA MER2_type -1 2490 2394 1292 197 48 0 chr5 85958020 85958269 -113671881 - Tigger7 DNA MER2_type -2224 263 3 1494 197 9 50 chr5 85959291 85959611 -113670539 - AluJo SINE Alu -5 307 1 700 266 0 19 chr5 85960403 85960610 -113669540 + L1MEc LINE L1 45 247 -6149 1919 223 87 19 chr5 85960613 85961232 -113668918 + L1ME1 LINE L1 5489 6149 -17 2098 105 3 18 chr5 85961254 85961540 -113668610 + AluSq SINE Alu 11 292 -21 524 200 7 0 chr5 85961545 85961690 -113668460 + (TA)n Simple_repeat Simple_repeat 1 146 0 701 100 8 46 chr5 85961690 85961820 -113668330 - L1MB3 LINE L1 -3 6180 6056 659 246 9 88 chr5 85961992 85962220 -113667930 - MIR SINE MIR -13 249 40 249 281 52 21 chr5 85962362 85962458 -113667692 - L2 LINE L2 0 3313 3215 192 277 326 7 chr5 85964305 85964446 -113665704 + MIR SINE MIR 75 260 -2 227 213 0 0 chr5 85964451 85964498 -113665652 + (TTA)n Simple_repeat Simple_repeat 3 49 0 1756 181 19 9 chr5 85966187 85966714 -113663436 - L1M4 LINE L1 -562 5616 5086 387 352 8 8 chr5 85967015 85967140 -113663010 - MER91A DNA MER1_type -52 144 20 37389 31 22 89 chr5 85967265 85973435 -113656715 - L1P2 LINE L1 -402 5753 7 293 296 68 25 chr5 85974468 85974630 -113655520 + MER102b DNA MER1_type 163 331 -10 387 0 0 0 chr5 85974739 85974782 -113655368 + (TC)n Simple_repeat Simple_repeat 2 44 0 279 0 0 0 chr5 85974781 85974812 -113655338 + (TA)n Simple_repeat Simple_repeat 1 31 0 * 1104 264 70 12 chr5 85975358 85975703 -113654447 + LTR16C LTR ERVL 127 491 0 22 35 0 0 chr5 85975862 85975891 -113654259 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 85976424 85976446 -113653704 + AT_rich Low_complexity Low_complexity 1 22 0 211 317 99 20 chr5 85976524 85976625 -113653525 + L2 LINE L2 3197 3305 -8 23 33 0 0 chr5 85977608 85977638 -113652512 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 85977928 85977950 -113652200 + AT_rich Low_complexity Low_complexity 1 22 0 268 236 45 67 chr5 85979322 85979411 -113650739 + MIR SINE MIR 62 148 -114 197 252 90 49 chr5 85979559 85979641 -113650509 + MIR3 SINE MIR 70 154 -54 205 182 0 23 chr5 85981273 85981317 -113648833 + CT-rich Low_complexity Low_complexity 2 44 0 215 254 14 14 chr5 85983075 85983146 -113647004 + CT-rich Low_complexity Low_complexity 2 72 0 285 266 28 37 chr5 85983807 85983916 -113646234 + GA-rich Low_complexity Low_complexity 2 109 0 216 0 0 0 chr5 85984468 85984492 -113645658 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 215 146 24 0 chr5 85986288 85986329 -113643821 + (TG)n Simple_repeat Simple_repeat 2 43 0 27 73 0 0 chr5 85986568 85986623 -113643527 + AT_rich Low_complexity Low_complexity 1 55 0 1027 284 17 72 chr5 85987390 85987562 -113642588 + L1MC4a LINE L1 5314 5494 -668 2076 116 27 13 chr5 85987562 85987863 -113642287 - AluSq SINE Alu -7 306 2 1027 284 17 72 chr5 85987863 85988356 -113641794 + L1MC4a LINE L1 5494 5931 -231 417 263 203 32 chr5 85988364 85988645 -113641505 - L2 LINE L2 0 3313 2985 622 301 47 12 chr5 85989507 85989763 -113640387 - MER102a DNA MER1_type 0 330 66 233 281 0 0 chr5 85990276 85990333 -113639817 + LTR11 LTR ERV 424 480 -204 311 365 61 17 chr5 85990562 85990743 -113639407 - MIR SINE MIR -56 206 18 638 62 146 0 chr5 85990859 85990955 -113639195 - AluY SINE Alu -8 303 194 368 267 9 17 chr5 85991624 85991740 -113638410 - MLT1L LTR MaLR -5 610 496 706 297 57 34 chr5 85991813 85992167 -113637983 - MLT1L LTR MaLR -225 390 29 261 286 122 41 chr5 85992336 85992434 -113637716 - MIR SINE MIR -84 124 19 1860 192 59 102 chr5 85993998 85994534 -113635616 + MLT2B3 LTR ERVL 1 512 -42 207 0 0 0 chr5 85994534 85994557 -113635593 + (TG)n Simple_repeat Simple_repeat 2 24 0 1860 192 59 102 chr5 85994557 85994599 -113635551 + MLT2B3 LTR ERVL 512 554 0 287 281 76 35 chr5 85995532 85995703 -113634447 + L1M3c LINE L1 958 1135 -5963 1471 308 27 11 chr5 85996457 85997006 -113633144 + L1M3c LINE L1 1614 2171 -4997 1330 148 140 28 chr5 85997197 85997534 -113632616 - Tigger3(Golem) DNA MER2_type -13 3016 1 2712 250 77 37 chr5 85997534 85999201 -113630949 + L1MA9 LINE L1 2284 4043 -3522 * 2779 223 29 19 chr5 85999195 85999415 -113630735 + L1MA9 LINE L1 5513 5729 -1836 2331 114 0 0 chr5 85999415 85999721 -113630429 + AluSx SINE Alu 1 306 -6 2779 223 29 19 chr5 85999721 86000232 -113629918 + L1MA9 LINE L1 5729 6251 -1314 * 2900 159 25 72 chr5 86000224 86000909 -113629241 + L1MA9 LINE L1 7075 7727 -4 278 26 26 0 chr5 86001254 86001293 -113628857 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 31891 48 1 1 chr5 86001300 86006170 -113623980 - L1PA2 LINE L1 0 6155 1287 272 282 24 24 chr5 86006196 86006320 -113623830 - MLT1L LTR MaLR -18 597 474 6817 140 45 2 chr5 86006995 86008176 -113621974 + Tigger3b DNA MER2_type 1 1231 0 440 256 19 44 chr5 86008318 86008478 -113621672 + MIR SINE MIR 61 216 -46 515 244 190 24 chr5 86008735 86008940 -113621210 - MIR SINE MIR -21 241 3 987 108 0 0 chr5 86008986 86009116 -113621034 + AluSp/q SINE Alu 171 300 -13 751 280 53 38 chr5 86009117 86009435 -113620715 - L2 LINE L2 -534 2780 2458 1447 144 3 109 chr5 86009516 86009829 -113620321 + AluJo SINE Alu 5 284 -28 189 0 0 0 chr5 86009836 86009857 -113620293 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 223 227 15 45 chr5 86009979 86010045 -113620105 + L2 LINE L2 3209 3272 0 1316 180 6 93 chr5 86011575 86011886 -113618264 + AluJb SINE Alu 5 288 -24 452 250 0 0 chr5 86012050 86012142 -113618008 + MIR3 SINE MIR 117 208 0 220 296 127 0 chr5 86015248 86015319 -113614831 + L2 LINE L2 3234 3313 0 265 330 0 10 chr5 86017436 86017539 -113612611 - MIR SINE MIR -63 199 98 203 125 25 0 chr5 86017994 86018034 -113612116 + GA-rich Low_complexity Low_complexity 1 41 0 2226 101 10 0 chr5 86019163 86019460 -113610690 - AluSx SINE Alu -12 300 1 2740 77 3 0 chr5 86019559 86019911 -113610239 - THE1A LTR MaLR 0 355 3 11637 91 4 1 chr5 86019913 86021488 -113608662 - THE1A-int LTR MaLR 0 1580 1 2688 84 3 3 chr5 86021488 86021843 -113608307 - THE1A LTR MaLR 0 355 1 871 212 0 22 chr5 86023646 86023825 -113606325 + FAM SINE Alu 1 175 0 496 53 26 13 chr5 86023830 86023906 -113606244 + (GAAA)n Simple_repeat Simple_repeat 4 80 0 232 204 20 0 chr5 86024757 86024806 -113605344 - L2 LINE L2 -3 3310 3261 1918 84 16 0 chr5 86025637 86025886 -113604264 + AluSg SINE Alu 27 279 -31 837 97 0 0 chr5 86025918 86026031 -113604119 - AluSg/x SINE Alu -11 301 189 304 332 19 68 chr5 86026061 86026266 -113603884 - MER91A DNA MER1_type -1 195 1 25 0 0 0 chr5 86026345 86026370 -113603780 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr5 86028837 86028866 -113601284 + AT_rich Low_complexity Low_complexity 1 29 0 264 59 0 0 chr5 86029200 86029234 -113600916 + (TG)n Simple_repeat Simple_repeat 2 35 0 2036 111 6 41 chr5 86029234 86029541 -113600609 - AluSq SINE Alu -15 298 1 321 353 157 10 chr5 86030141 86030447 -113599703 - L3b LINE CR1 -131 1452 1102 2357 63 0 30 chr5 86030733 86030902 -113599248 + AluY SINE Alu 1 159 -152 309 68 0 0 chr5 86030902 86030946 -113599204 + (CCCTAA)n Simple_repeat Simple_repeat 1 44 0 2357 63 0 30 chr5 86030946 86031077 -113599073 + AluY SINE Alu 159 292 -19 189 254 90 15 chr5 86032036 86032103 -113598047 + MIR3 SINE MIR 6 77 -131 25 51 0 0 chr5 86032997 86033036 -113597114 + AT_rich Low_complexity Low_complexity 1 39 0 549 55 0 0 chr5 86039278 86039351 -113590799 + (CCTA)n Simple_repeat Simple_repeat 2 74 0 2288 89 0 0 chr5 86040713 86041005 -113589145 - AluSg SINE Alu -18 292 1 414 134 0 0 chr5 86043757 86043824 -113586326 + (CA)n Simple_repeat Simple_repeat 2 68 0 248 325 13 0 chr5 86044043 86044120 -113586030 - MER2 DNA MER2_type 0 345 268 861 141 61 94 chr5 86044179 86044392 -113585758 - MER2 DNA MER2_type -138 207 2 217 323 21 0 chr5 86044394 86044487 -113585663 + MIR SINE MIR 72 166 -96 206 268 0 0 chr5 86044583 86044624 -113585526 + L2 LINE L2 3210 3250 -22 696 236 47 0 chr5 86047510 86047658 -113582492 + FRAM SINE Alu 1 154 -22 484 236 187 6 chr5 86047821 86048003 -113582147 + L1MA9 LINE L1 6056 6270 -42 232 300 17 0 chr5 86048419 86048479 -113581671 + L2 LINE L2 3210 3270 -2 21 0 0 0 chr5 86050412 86050433 -113579717 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 86051555 86051584 -113578566 + AT_rich Low_complexity Low_complexity 1 29 0 180 77 0 0 chr5 86052099 86052125 -113578025 + (GAA)n Simple_repeat Simple_repeat 1 26 0 392 311 8 8 chr5 86057936 86058055 -113572095 - MIR SINE MIR -142 120 2 23 54 0 0 chr5 86059782 86059819 -113570331 + AT_rich Low_complexity Low_complexity 1 37 0 1487 150 55 12 chr5 86061425 86061678 -113568472 + AluJo SINE Alu 7 270 -42 577 220 104 17 chr5 86062189 86062362 -113567788 - MER5A DNA MER1_type -1 188 1 215 300 95 26 chr5 86062371 86062561 -113567589 - L2 LINE L2 -556 2758 2556 771 176 10 36 chr5 86062661 86062854 -113567296 + MER53 DNA DNA 1 188 -1 343 221 69 69 chr5 86064150 86064281 -113565869 - L2 LINE L2 -8 3305 3175 348 304 18 27 chr5 86064366 86064478 -113565672 - MIR SINE MIR -80 128 18 2419 91 0 0 chr5 86065555 86065863 -113564287 + AluSq SINE Alu 1 308 -5 2112 125 3 3 chr5 86066183 86066495 -113563655 + AluSx SINE Alu 1 312 0 210 37 0 0 chr5 86067592 86067619 -113562531 + (CA)n Simple_repeat Simple_repeat 2 28 0 27 49 0 0 chr5 86067652 86067693 -113562457 + AT_rich Low_complexity Low_complexity 1 41 0 242 273 109 0 chr5 86068545 86068655 -113561495 + MER113 DNA MER1_type? 399 520 -1 298 194 42 14 chr5 86068716 86068788 -113561362 + MER116 DNA Mariner 2 75 -5 680 208 0 0 chr5 86069130 86069255 -113560895 - FLAM_C SINE Alu -8 125 1 225 207 121 95 chr5 86070060 86070176 -113559974 - MIR SINE MIR -69 139 21 373 256 138 31 chr5 86070658 86070818 -113559332 + MER5B DNA MER1_type 2 178 0 541 309 64 20 chr5 86071074 86071283 -113558867 - MIR SINE MIR -29 233 18 308 329 118 60 chr5 86074289 86074776 -113555374 + L2 LINE L2 2717 3272 0 31 0 0 0 chr5 86079124 86079155 -113550995 + AT_rich Low_complexity Low_complexity 1 31 0 321 100 0 0 chr5 86080325 86080375 -113549775 + (TG)n Simple_repeat Simple_repeat 1 50 0 2122 106 20 13 chr5 86080901 86081203 -113548947 - AluSq SINE Alu -9 304 1 2156 96 3 10 chr5 86082239 86082542 -113547608 - AluSg SINE Alu -8 302 2 641 284 102 46 chr5 86083684 86084254 -113545896 - L1ME4a LINE L1 -11 6110 5509 672 273 19 14 chr5 86084344 86084553 -113545597 - L2 LINE L2 -10 3303 3094 21 0 0 0 chr5 86085763 86085784 -113544366 + AT_rich Low_complexity Low_complexity 1 21 0 342 0 0 0 chr5 86087798 86087836 -113542314 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2222 99 3 0 chr5 86087846 86088130 -113542020 - AluSc SINE Alu -24 285 1 447 300 40 40 chr5 86088166 86088366 -113541784 + Charlie8 DNA MER1_type 75 274 -2143 6010 134 84 58 chr5 86088392 86089593 -113540557 - Ricksha_b DNA DNA -13 1241 9 971 210 9 31 chr5 86090478 86090702 -113539448 - MER20 DNA MER1_type 0 219 1 2024 253 63 24 chr5 86091204 86092057 -113538093 - L1ME3 LINE L1 -211 5951 5023 2935 111 74 10 chr5 86092057 86092545 -113537605 + LTR44 LTR ERV1 1 519 0 2024 253 63 24 chr5 86092545 86092846 -113537304 - L1ME3 LINE L1 -1139 5023 4735 2458 116 39 0 chr5 86093042 86093423 -113536727 + L1PA13 LINE L1 5767 6162 -1 21 82 0 0 chr5 86093882 86093931 -113536219 + AT_rich Low_complexity Low_complexity 1 49 0 243 0 0 0 chr5 86094161 86094188 -113535962 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2240 102 0 3 chr5 86094190 86094485 -113535665 - AluSc SINE Alu -15 294 1 325 295 201 7 chr5 86097465 86097614 -113532536 - MIR SINE MIR -25 237 60 374 289 70 0 chr5 86097727 86097841 -113532309 - L2 LINE L2 -1 3312 3191 2300 234 93 9 chr5 86099152 86100072 -113530078 - Charlie2 DNA MER1_type 0 2862 1865 250 233 78 147 chr5 86100076 86100205 -113529945 - Charlie2 DNA MER1_type -2473 309 190 731 229 46 11 chr5 86100214 86100389 -113529761 + MER5A DNA MER1_type 4 184 -5 381 252 163 0 chr5 86100396 86100531 -113529619 - Charlie2 DNA MER1_type -2581 201 45 468 307 16 16 chr5 86101046 86101173 -113528977 - L2 LINE L2 -5 3267 3141 189 349 56 24 chr5 86101521 86101647 -113528503 + L2 LINE L2 2618 2747 -567 453 310 122 23 chr5 86101947 86102393 -113527757 + LTR33 LTR ERVL 18 519 -2 573 291 8 8 chr5 86104836 86104970 -113525180 + L2 LINE L2 3137 3270 -2 439 306 22 8 chr5 86104996 86105130 -113525020 - MIR SINE MIR -101 161 26 2310 98 0 3 chr5 86105214 86105521 -113524629 + AluSc SINE Alu 1 306 -3 183 162 0 0 chr5 86106325 86106362 -113523788 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 2204 110 3 0 chr5 86107075 86107367 -113522783 + AluSx SINE Alu 1 293 -19 365 172 0 0 chr5 86108141 86108205 -113521945 + MER5B DNA MER1_type 115 178 0 636 224 147 0 chr5 86108214 86108370 -113521780 - MER5A DNA MER1_type -1 188 10 634 268 36 0 chr5 86108387 86108555 -113521595 - MER5A DNA MER1_type 0 189 16 222 271 21 0 chr5 86108711 86108759 -113521391 - L2 LINE L2 -504 2810 2762 246 183 70 70 chr5 86108940 86109011 -113521139 - MIR SINE MIR -86 176 106 24 32 0 0 chr5 86109651 86109682 -113520468 + AT_rich Low_complexity Low_complexity 1 31 0 419 169 18 32 chr5 86109766 86110058 -113520092 + (TTATA)n Simple_repeat Simple_repeat 1 287 0 1093 271 258 33 chr5 86110615 86111450 -113518700 + L2 LINE L2 1962 3056 -257 2035 126 7 29 chr5 86111450 86111759 -113518391 - AluSx SINE Alu -10 302 1 1093 271 258 33 chr5 86111759 86111819 -113518331 + L2 LINE L2 3056 3101 -212 301 235 15 0 chr5 86111814 86111882 -113518268 + L2 LINE L2 3245 3313 0 * 686 301 83 62 chr5 86112019 86112454 -113517696 - L2 LINE L2 -1 3312 2869 663 300 49 5 chr5 86112479 86112702 -113517448 + MIR SINE MIR 1 233 -29 1570 142 112 0 chr5 86112702 86112962 -113517188 - MLT1A1 LTR MaLR 0 365 77 25 0 0 0 chr5 86113322 86113347 -113516803 + AT_rich Low_complexity Low_complexity 1 25 0 647 214 41 0 chr5 86114348 86114493 -113515657 + L1MEc LINE L1 45 195 -6201 180 293 0 85 chr5 86114588 86114670 -113515480 + MIR3 SINE MIR 5 79 -129 513 323 32 48 chr5 86114795 86115043 -113515107 - L1MEd LINE L1 -4934 1136 893 198 407 12 0 chr5 86115134 86115220 -113514930 + MIR SINE MIR 157 243 -19 2079 110 3 7 chr5 86115229 86115530 -113514620 - AluSx SINE Alu -12 300 1 305 226 52 26 chr5 86115804 86115919 -113514231 - L1MEd LINE L1 -5170 900 783 225 0 0 0 chr5 86115940 86115965 -113514185 + (TC)n Simple_repeat Simple_repeat 2 26 0 230 285 146 24 chr5 86116584 86116707 -113513443 - L1MEd LINE L1 -5860 210 73 1350 278 63 67 chr5 86116766 86117428 -113512722 + L2 LINE L2 1820 2479 -835 21 0 0 0 chr5 86117726 86117747 -113512403 + AT_rich Low_complexity Low_complexity 1 21 0 1303 81 152 0 chr5 86118053 86118251 -113511899 + MER30 DNA MER1_type 3 230 0 284 243 43 0 chr5 86118318 86118388 -113511762 + MIR SINE MIR 71 143 -65 470 247 170 41 chr5 86118441 86118635 -113511515 - MIR SINE MIR -32 230 12 395 89 0 0 chr5 86118693 86118749 -113511401 + MLT2B1 LTR ERVL 2 57 -463 872 226 63 106 chr5 86118750 86119117 -113511033 - MLT1A1 LTR MaLR -12 353 3 1474 198 133 24 chr5 86119119 86119458 -113510692 + MLT2B1 LTR ERVL 47 422 -98 432 0 0 0 chr5 86119463 86119511 -113510639 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 2036 125 0 0 chr5 86119571 86119851 -113510299 - AluSx SINE Alu -32 280 1 237 261 166 13 chr5 86120542 86120699 -113509451 - MIR3 SINE MIR -6 202 22 1621 217 58 14 chr5 86120773 86121207 -113508943 + MLT1C LTR MaLR 15 467 0 2228 108 3 0 chr5 86121318 86121614 -113508536 + AluSg SINE Alu 1 297 -13 420 269 38 44 chr5 86122238 86122398 -113507752 + MIR SINE MIR 49 207 -55 1394 174 99 4 chr5 86122422 86122675 -113507475 + AluJb SINE Alu 11 287 -25 22 0 0 0 chr5 86123063 86123085 -113507065 + AT_rich Low_complexity Low_complexity 1 22 0 488 110 28 9 chr5 86123431 86123540 -113506610 + (TA)n Simple_repeat Simple_repeat 2 112 0 22 0 0 0 chr5 86123948 86123970 -113506180 + AT_rich Low_complexity Low_complexity 1 22 0 2286 113 0 0 chr5 86124550 86124860 -113505290 + AluSx SINE Alu 1 310 -2 2862 3 0 0 chr5 86125157 86125465 -113504685 - AluYa5 SINE Alu -3 308 1 726 271 51 19 chr5 86125634 86125848 -113504302 + LTR16A LTR ERVL 69 289 -161 1962 194 22 0 chr5 86125850 86126205 -113503945 + MLT1A1 LTR MaLR 1 363 -2 8092 215 32 29 chr5 86126213 86127935 -113502215 + MLT1A1-int LTR MaLR 7 1735 0 1744 186 33 36 chr5 86127941 86128301 -113501849 + MLT1A1 LTR MaLR 7 365 0 421 264 139 0 chr5 86128316 86128445 -113501705 + LTR16A LTR ERVL 301 447 -3 856 180 10 88 chr5 86128747 86128941 -113501209 + MER97b DNA MER1_type? 1 179 -874 182 341 61 0 chr5 86129127 86129209 -113500941 + L2 LINE L2 3185 3271 -1 1572 148 46 33 chr5 86129385 86129441 -113500709 + MER34C LTR ERV1 1 55 -530 1873 193 64 25 chr5 86129441 86129881 -113500269 - LOR1b LTR ERV1 -2 459 3 1572 148 46 33 chr5 86129881 86130128 -113500022 + MER34C LTR ERV1 55 308 -277 218 304 20 39 chr5 86130128 86130230 -113499920 + MER91 DNA MER1_type 40 139 -57 474 320 20 30 chr5 86130641 86130838 -113499312 + MIR SINE MIR 56 250 -12 218 369 43 78 chr5 86132058 86132340 -113497810 - L2 LINE L2 -48 3224 2953 1808 156 67 25 chr5 86132354 86132714 -113497436 + THE1C LTR MaLR 1 375 0 236 100 25 0 chr5 86132861 86132901 -113497249 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr5 86135166 86135195 -113494955 + AT_rich Low_complexity Low_complexity 1 29 0 882 152 0 67 chr5 86135885 86136049 -113494101 + FRAM SINE Alu 1 153 -13 24 0 0 0 chr5 86136061 86136085 -113494065 + AT_rich Low_complexity Low_complexity 1 24 0 393 274 105 0 chr5 86137203 86137327 -113492823 + MER39 LTR ERV1 1 137 -570 * 1284 179 34 30 chr5 86137324 86137666 -113492484 + MER39 LTR ERV1 307 707 0 2573 122 2 80 chr5 86137781 86137984 -113492166 + L1MB3 LINE L1 5428 5645 -538 2076 101 0 0 chr5 86137984 86138251 -113491899 + AluSq SINE Alu 29 295 -18 2573 122 2 80 chr5 86138251 86138548 -113491602 + L1MB3 LINE L1 5645 5889 -294 737 215 9 80 chr5 86138548 86138845 -113491305 + MSTD LTR MaLR 1 265 -100 876 306 42 25 chr5 86138852 86139260 -113490890 + HERV16 LTR ERVL 139 553 -4443 1251 312 28 15 chr5 86139296 86139757 -113490393 + HERV16 LTR ERVL 746 1212 -3784 1234 319 93 17 chr5 86139797 86140490 -113489660 + HERV16 LTR ERVL 2334 3080 -1916 645 279 70 10 chr5 86140484 86140685 -113489465 + HERV16 LTR ERVL 3325 3537 -2117 * 417 349 48 20 chr5 86140747 86140999 -113489151 + HERV16 LTR ERVL 3662 3920 -1844 960 285 117 20 chr5 86141055 86141406 -113488744 + HERV16 LTR ERVL 3984 4368 -1286 3531 111 25 22 chr5 86144081 86144631 -113485519 + MER41A LTR ERV1 3 554 0 213 159 0 0 chr5 86145342 86145386 -113484764 + (ATG)n Simple_repeat Simple_repeat 2 45 0 288 278 10 41 chr5 86145410 86145507 -113484643 - MIR SINE MIR -15 247 154 238 241 36 71 chr5 86145861 86145973 -113484177 + MER20B DNA MER1_type 64 171 -612 2151 58 4 0 chr5 86146099 86146373 -113483777 + AluY SINE Alu 1 275 -36 1032 32 0 0 chr5 86146374 86146498 -113483652 + (GAAA)n Simple_repeat Simple_repeat 2 125 0 2009 133 0 3 chr5 86146719 86147044 -113483106 - AluSx SINE Alu 0 324 1 264 59 0 0 chr5 86147097 86147131 -113483019 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2818 46 3 0 chr5 86147131 86147477 -113482673 - L1PA7 LINE L1 -16 6138 5792 2132 148 81 4 chr5 86147761 86148350 -113481800 + MER39 LTR ERV1 11 707 0 24 67 0 0 chr5 86149519 86149564 -113480586 + AT_rich Low_complexity Low_complexity 1 45 0 294 222 16 0 chr5 86149744 86149807 -113480343 - MIR SINE MIR 0 262 199 547 321 53 19 chr5 86149813 86150022 -113480128 + MIR SINE MIR 3 218 -44 433 295 57 75 chr5 86150027 86150254 -113479896 - MIR SINE MIR -39 223 1 208 128 43 21 chr5 86150485 86150532 -113479618 + CT-rich Low_complexity Low_complexity 1 48 0 513 213 77 65 chr5 86151052 86151207 -113478943 + MER5B DNA MER1_type 1 157 -21 30 0 0 0 chr5 86156183 86156213 -113473937 + AT_rich Low_complexity Low_complexity 1 30 0 952 198 8 67 chr5 86157714 86157936 -113472214 + MER58A DNA MER1_type 1 210 -2210 1691 138 3 93 chr5 86157936 86158270 -113471880 + AluSx SINE Alu 1 304 -8 952 198 8 67 chr5 86158270 86158285 -113471865 + MER58A DNA MER1_type 210 224 0 829 203 7 0 chr5 86158351 86158489 -113471661 + MER45A DNA AcHobo 1 139 -39 829 152 0 0 chr5 86158514 86158646 -113471504 - FLAM_C SINE Alu -1 132 1 279 208 0 0 chr5 86158646 86158694 -113471456 + MER45A DNA AcHobo 131 178 0 1447 105 16 85 chr5 86160238 86160485 -113469665 - MER30 DNA MER1_type 0 230 1 333 0 0 0 chr5 86163289 86163326 -113466824 + (TA)n Simple_repeat Simple_repeat 2 38 0 525 249 33 17 chr5 86163934 86164115 -113466035 + L1MC5 LINE L1 7726 7909 -52 194 309 32 75 chr5 86164437 86164531 -113465619 + MIR SINE MIR 16 105 -157 2107 67 0 0 chr5 86164881 86165136 -113465014 - AluY SINE Alu -2 309 55 231 143 0 0 chr5 86165257 86165313 -113464837 - MER113 DNA MER1_type? -298 223 168 268 253 44 33 chr5 86165460 86165551 -113464599 - MIR SINE MIR -97 111 20 511 330 98 5 chr5 86169012 86169236 -113460914 + MIR SINE MIR 3 247 -15 252 0 0 0 chr5 86169774 86169802 -113460348 + (TG)n Simple_repeat Simple_repeat 2 29 0 2241 126 0 0 chr5 86170302 86170611 -113459539 + AluSx SINE Alu 1 309 -3 2251 90 0 7 chr5 86171343 86171644 -113458506 - AluSq SINE Alu -3 310 12 24 0 0 0 chr5 86172053 86172077 -113458073 + AT_rich Low_complexity Low_complexity 1 24 0 705 97 90 15 chr5 86172170 86172304 -113457846 - L1MB4 LINE L1 -6 6174 6031 2424 88 0 0 chr5 86173249 86173545 -113456605 + AluSx SINE Alu 1 296 -16 538 250 43 7 chr5 86175040 86175180 -113454970 + MIR SINE MIR 99 243 -19 244 239 46 18 chr5 86175424 86175533 -113454617 + (TCTA)n Simple_repeat Simple_repeat 4 115 0 2523 55 3 0 chr5 86175694 86176001 -113454149 - AluY SINE Alu -3 308 1 307 317 67 10 chr5 86176168 86176274 -113453876 + MIR SINE MIR 16 124 -84 1295 111 0 0 chr5 86176289 86176461 -113453689 - AluSq SINE Alu -141 172 1 424 315 43 31 chr5 86177394 86177648 -113452502 - Charlie8 DNA MER1_type -2160 257 1 1178 337 80 28 chr5 86177650 86178572 -113451578 + L2 LINE L2 2094 3061 -252 2025 145 0 0 chr5 86178645 86178935 -113451215 - AluSx SINE Alu -17 295 6 23 33 0 0 chr5 86178939 86178969 -113451181 + AT_rich Low_complexity Low_complexity 1 30 0 301 278 82 31 chr5 86181287 86181384 -113448766 + L2 LINE L2 3134 3235 -37 553 275 129 53 chr5 86182337 86182693 -113447457 - L2 LINE L2 -4 3309 2927 330 311 25 25 chr5 86182661 86182783 -113447367 + MIR3 SINE MIR 86 207 -1 * 231 305 24 37 chr5 86182812 86182894 -113447256 - L2 LINE L2 -3 3310 3230 345 217 14 0 chr5 86182953 86183022 -113447128 - L2 LINE L2 0 3313 3244 1986 143 13 0 chr5 86183478 86183779 -113446371 + AluSx SINE Alu 1 305 -7 613 235 38 9 chr5 86184033 86184206 -113445944 - MIR SINE MIR -36 226 53 216 0 0 0 chr5 86184947 86184971 -113445179 + (TG)n Simple_repeat Simple_repeat 1 24 0 2224 87 0 0 chr5 86184971 86185246 -113444904 - AluSg SINE Alu -33 277 3 186 43 0 0 chr5 86185246 86185269 -113444881 + (TTTC)n Simple_repeat Simple_repeat 3 25 0 327 340 160 5 chr5 86189988 86190176 -113439974 - MIR SINE MIR -1 261 45 306 241 0 0 chr5 86190402 86190510 -113439640 + (CA)n Simple_repeat Simple_repeat 1 108 0 264 309 145 7 chr5 86191436 86191588 -113438562 - MIR SINE MIR -79 183 11 201 313 0 0 chr5 86191926 86191974 -113438176 + MIR SINE MIR 117 164 -98 698 165 44 51 chr5 86192173 86192331 -113437819 + MER5A DNA MER1_type 33 189 0 270 0 0 0 chr5 86192476 86192506 -113437644 + (TG)n Simple_repeat Simple_repeat 2 31 0 247 343 36 29 chr5 86194024 86194164 -113435986 + MIR3 SINE MIR 67 207 -1 27 62 0 0 chr5 86195725 86195773 -113434377 + AT_rich Low_complexity Low_complexity 1 48 0 1057 192 15 0 chr5 86195776 86195979 -113434171 - AluJb SINE Alu -20 292 87 28 0 0 0 chr5 86196716 86196744 -113433406 + AT_rich Low_complexity Low_complexity 1 28 0 270 316 134 36 chr5 86198740 86198997 -113431153 - L2 LINE L2 -192 3080 2798 253 222 167 0 chr5 86199475 86199529 -113430621 + L2 LINE L2 3188 3250 -63 267 300 0 0 chr5 86199595 86199655 -113430495 - MER91 DNA MER1_type -79 61 2 267 31 0 0 chr5 86202927 86202959 -113427191 + (T)n Simple_repeat Simple_repeat 1 32 0 1911 118 42 0 chr5 86204191 86204480 -113425670 + AluSq SINE Alu 1 301 -12 1789 145 0 50 chr5 86204487 86204805 -113425345 + AluJo SINE Alu 1 302 -10 2609 39 3 7 chr5 86204807 86205117 -113425033 + AluY SINE Alu 1 309 -2 1114 201 54 20 chr5 86205117 86205415 -113424735 + L1MB2 LINE L1 5828 6135 -36 4937 200 72 123 chr5 86206523 86208001 -113422149 + L1M4 LINE L1 2315 3620 -2526 2332 87 0 3 chr5 86208001 86208289 -113421861 - AluSx SINE Alu -25 287 1 4937 200 72 123 chr5 86208289 86209249 -113420901 + L1M4 LINE L1 3620 4628 -1518 896 87 29 12 chr5 86209359 86209532 -113420618 + (TGGA)n Simple_repeat Simple_repeat 1 176 0 283 183 17 46 chr5 86209532 86209707 -113420443 + (GACTG)n Simple_repeat Simple_repeat 4 173 0 * 1095 143 4 11 chr5 86209703 86209967 -113420183 + (TGGA)n Simple_repeat Simple_repeat 1 263 0 186 268 0 18 chr5 86210412 86210468 -113419682 + L2 LINE L2 2992 3046 -226 1981 149 0 34 chr5 86210888 86211209 -113418941 + AluSx SINE Alu 1 310 -2 2366 101 3 3 chr5 86211219 86211527 -113418623 + AluSx SINE Alu 1 308 -4 2197 75 0 28 chr5 86211527 86211845 -113418305 + AluY SINE Alu 1 309 -2 14404 116 14 11 chr5 86212505 86214799 -113415351 + L1P LINE L1 2300 4601 -1545 9653 65 1 0 chr5 86214910 86216916 -113413234 + L1PA7 LINE L1 4146 6151 -3 21 100 0 0 chr5 86216993 86217063 -113413087 + AT_rich Low_complexity Low_complexity 1 70 0 344 337 37 27 chr5 86219238 86219425 -113410725 + MER5A DNA MER1_type 1 189 0 484 244 67 8 chr5 86219778 86219897 -113410253 + MER63 DNA MER1_type 2 753 -309 230 297 27 14 chr5 86219897 86219971 -113410179 + MER63 DNA MER1_type 979 1053 -8 1156 222 122 47 chr5 86220863 86221224 -113408926 + MLT1B LTR MaLR 3 390 0 579 300 39 35 chr5 86221310 86221567 -113408583 - MIR SINE MIR 0 262 5 1292 203 64 84 chr5 86221678 86222082 -113408068 - MSTD LTR MaLR 0 396 1 2308 238 103 9 chr5 86222093 86222656 -113407494 - MSTD-int LTR MaLR -13 1722 1107 2673 184 4 10 chr5 86222690 86223197 -113406953 + MER41B LTR ERV1 130 466 -12 1048 169 37 66 chr5 86223482 86223979 -113406171 + MER66-int LTR ERV1 594 1143 -5533 709 200 16 0 chr5 86224024 86224149 -113406001 + MER66-int LTR ERV1 1302 1428 -5248 1430 176 55 19 chr5 86224150 86224457 -113405693 + MER66-int LTR ERV1 1220 1537 -249 1407 141 124 20 chr5 86224444 86224798 -113405352 + MER66-int LTR ERV1 1647 2037 -6083 * 1858 79 12 4 chr5 86224906 86225146 -113405004 + AluY SINE Alu 59 300 -11 184 378 24 0 chr5 86225198 86225280 -113404870 - L3 LINE CR1 -73 1504 1421 812 226 108 0 chr5 86225295 86225481 -113404669 + MER20 DNA MER1_type 14 219 0 498 260 0 0 chr5 86225582 86225686 -113404464 + MLT1K LTR MaLR 125 228 -360 2046 110 14 14 chr5 86225727 86226060 -113404090 + AluSx SINE Alu 1 312 0 640 228 9 0 chr5 86226167 86226281 -113403869 + FLAM_C SINE Alu 2 116 -27 2385 60 0 3 chr5 86226296 86226605 -113403545 - AluY SINE Alu 0 308 1 877 191 0 7 chr5 86226630 86226777 -113403373 + FRAM SINE Alu 1 138 -38 369 0 0 0 chr5 86226785 86226826 -113403324 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 323 177 5 215 chr5 86226826 86226923 -113403227 + MLT1K LTR MaLR 330 371 -217 1944 160 0 6 chr5 86226923 86227236 -113402914 + AluSx SINE Alu 1 311 -1 323 177 5 215 chr5 86227236 86227324 -113402826 + MLT1K LTR MaLR 371 476 -112 429 68 0 17 chr5 86227324 86227383 -113402767 + Alu SINE Alu 240 297 -15 445 156 0 26 chr5 86227447 86227524 -113402626 + U3 snRNA snRNA 1 75 -142 24 0 0 0 chr5 86227524 86227548 -113402602 + AT_rich Low_complexity Low_complexity 1 24 0 207 100 0 0 chr5 86227593 86227623 -113402527 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1766 175 0 0 chr5 86227632 86227900 -113402250 - AluJb SINE Alu -44 268 1 32 26 0 0 chr5 86227900 86227939 -113402211 + AT_rich Low_complexity Low_complexity 1 39 0 931 83 16 0 chr5 86227943 86228064 -113402086 - FRAM SINE Alu -32 144 22 534 278 83 38 chr5 86228168 86228434 -113401716 - L2 LINE L2 -4 3309 3032 2324 110 3 3 chr5 86228441 86228751 -113401399 + AluSx SINE Alu 1 310 -2 2254 125 0 3 chr5 86228769 86229080 -113401070 + AluSx SINE Alu 1 310 -2 196 118 20 20 chr5 86230798 86230849 -113399301 + A-rich Low_complexity Low_complexity 6 56 0 1180 198 8 17 chr5 86231011 86231249 -113398901 + ERVL LTR ERVL 2436 2671 -3093 604 239 54 70 chr5 86231254 86231533 -113398617 - MLT1B LTR MaLR -2 388 102 210 37 0 0 chr5 86231533 86231560 -113398590 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2140 96 10 7 chr5 86231562 86231853 -113398297 - AluSq SINE Alu -21 292 1 1088 135 4 4 chr5 86231853 86232087 -113398063 + (TCCA)n Simple_repeat Simple_repeat 1 234 0 799 265 125 50 chr5 86232101 86232478 -113397672 - L2 LINE L2 -40 3273 2869 1019 139 12 18 chr5 86232603 86232769 -113397381 - AluSg/x SINE Alu -16 294 130 1997 113 0 4 chr5 86232769 86233035 -113397115 - AluSx SINE Alu -45 267 3 341 229 229 18 chr5 86233275 86233384 -113396766 + MIR SINE MIR 29 160 -102 857 151 75 0 chr5 86233390 86233536 -113396614 + AluJb SINE Alu 137 293 -19 905 147 14 0 chr5 86233721 86233864 -113396286 - FRAM SINE Alu -30 146 2 2060 132 3 10 chr5 86233868 86234179 -113395971 - AluJo SINE Alu -3 309 1 233 309 67 20 chr5 86234189 86234338 -113395812 - L1MC4a LINE L1 -1862 5946 5791 872 147 0 0 chr5 86234405 86234541 -113395609 + FLAM_C SINE Alu 1 136 -7 308 119 0 0 chr5 86234557 86234599 -113395551 + Alu SINE Alu 1 42 -258 2435 49 0 3 chr5 86234656 86234987 -113395163 + AluY SINE Alu 1 330 0 527 236 82 3 chr5 86235005 86235164 -113394986 + MIR SINE MIR 60 232 -30 1174 168 16 0 chr5 86235166 86235356 -113394794 - Tigger3(Golem) DNA MER2_type 0 3029 2837 2331 96 6 13 chr5 86235387 86235699 -113394451 - AluSx SINE Alu 0 312 3 1744 149 35 14 chr5 86235737 86236026 -113394124 - AluJb SINE Alu -13 299 5 647 253 26 81 chr5 86236098 86236437 -113393713 - L1MC4a LINE L1 -840 5519 5298 2052 121 0 0 chr5 86236437 86236717 -113393433 - AluSx SINE Alu -14 298 19 647 253 26 81 chr5 86236717 86236749 -113393401 - L1MC4a LINE L1 -1061 5298 5266 231 350 0 68 chr5 86236754 86236857 -113393293 + MIR SINE MIR 51 146 -116 1971 122 7 0 chr5 86236877 86237196 -113392954 + AluSx SINE Alu 1 321 0 281 349 24 16 chr5 86237202 86237328 -113392822 + MIR SINE MIR 136 262 0 769 234 105 112 chr5 86237374 86237425 -113392725 - MLT1J2 LTR MaLR 0 450 400 1793 152 3 17 chr5 86237425 86237727 -113392423 + AluJo SINE Alu 2 299 -13 2241 120 3 0 chr5 86237727 86238035 -113392115 + AluSg SINE Alu 1 309 -1 769 234 105 112 chr5 86238035 86238297 -113391853 - MLT1J2 LTR MaLR -49 401 137 2051 91 50 27 chr5 86238297 86238594 -113391556 - AluSp SINE Alu -9 304 1 769 234 105 112 chr5 86238594 86238705 -113391445 - MLT1J2 LTR MaLR -313 137 27 2018 135 0 10 chr5 86238798 86239087 -113391063 + AluJo SINE Alu 1 286 -26 188 156 22 0 chr5 86239292 86239319 -113390831 + (CATTC)n Simple_repeat Simple_repeat 5 35 -15 2386 93 0 0 chr5 86239319 86239619 -113390531 - AluSx SINE Alu -12 300 1 188 156 22 0 chr5 86239619 86239636 -113390514 + (CATTC)n Simple_repeat Simple_repeat 35 50 0 533 278 115 9 chr5 86239709 86239986 -113390164 + L2 LINE L2 2720 3017 -296 901 173 7 7 chr5 86240004 86240156 -113389994 - AluJo/FRAM SINE Alu -12 290 141 2202 103 13 0 chr5 86240156 86240456 -113389694 - AluSp SINE Alu -9 304 1 1801 92 60 35 chr5 86240760 86241043 -113389107 + AluSx SINE Alu 1 290 -22 1167 166 0 34 chr5 86241279 86241514 -113388636 + AluJo SINE Alu 86 312 0 2009 109 13 3 chr5 86242342 86242646 -113387504 + AluSx SINE Alu 1 307 -5 1991 113 20 13 chr5 86243344 86243644 -113386506 - AluSx SINE Alu -10 302 1 202 188 0 0 chr5 86243700 86243732 -113386418 - L2 LINE L2 -19 3294 3263 791 137 8 0 chr5 86243811 86243935 -113386215 - AluJo SINE Alu -178 134 10 203 299 46 23 chr5 86243955 86244042 -113386108 - MIR SINE MIR -142 120 32 188 33 0 33 chr5 86247170 86247200 -113382950 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 774 147 0 0 chr5 86247200 86247316 -113382834 - FLAM_C SINE Alu -26 117 2 24 0 0 0 chr5 86247401 86247425 -113382725 + AT_rich Low_complexity Low_complexity 1 24 0 1725 162 28 0 chr5 86247429 86247713 -113382437 + AluJo SINE Alu 5 296 -16 273 204 51 19 chr5 86247739 86247896 -113382254 + (TA)n Simple_repeat Simple_repeat 2 163 0 732 130 65 8 chr5 86248067 86248190 -113381960 - L1PA8A LINE L1 0 6131 6002 312 259 105 43 chr5 86248321 86248483 -113381667 + L2 LINE L2 2733 2904 -410 2018 78 22 0 chr5 86248505 86248776 -113381374 - AluSc SINE Alu -15 294 18 1094 149 0 17 chr5 86248931 86249112 -113381038 - AluJb SINE Alu 0 312 135 333 283 123 0 chr5 86249151 86249289 -113380861 + L2 LINE L2 2919 3073 -240 2137 108 7 0 chr5 86249295 86249600 -113380550 + AluSp SINE Alu 5 311 -2 190 0 32 32 chr5 86249650 86249681 -113380469 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1123 119 42 0 chr5 86249710 86249762 -113380388 - AluSx SINE Alu -133 179 131 210 37 0 0 chr5 86249762 86249789 -113380361 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 1123 119 42 0 chr5 86249789 86249904 -113380246 - AluSx SINE Alu -181 131 5 2194 92 0 29 chr5 86249915 86250231 -113379919 - AluSx SINE Alu -5 307 1 234 225 99 63 chr5 86250278 86250420 -113379730 + L2 LINE L2 3160 3306 -7 383 302 82 42 chr5 86250436 86250746 -113379404 - L2 LINE L2 -205 3108 2781 2198 92 3 0 chr5 86250746 86251041 -113379109 - AluSx SINE Alu -16 296 1 333 325 0 38 chr5 86251055 86251212 -113378938 - MIR SINE MIR -74 188 38 666 199 94 73 chr5 86251391 86251582 -113378568 + MER20 DNA MER1_type 1 195 -24 2115 84 10 17 chr5 86251586 86251721 -113378429 + AluSx SINE Alu 1 135 -177 2345 82 0 9 chr5 86251721 86252036 -113378114 + AluSx SINE Alu 1 312 0 2115 84 10 17 chr5 86252036 86252197 -113377953 + AluSx SINE Alu 135 295 -17 854 276 143 13 chr5 86252760 86253137 -113377013 + MLT1J2 LTR MaLR 25 450 0 2062 130 0 3 chr5 86253298 86253605 -113376545 + AluSx SINE Alu 5 310 -2 709 250 27 104 chr5 86253719 86253809 -113376341 - MIR SINE MIR -21 241 146 2146 112 0 3 chr5 86253809 86254113 -113376037 - AluSq SINE Alu -10 303 1 709 250 27 104 chr5 86254113 86254131 -113376019 - MIR SINE MIR -116 146 128 1697 155 3 41 chr5 86254131 86254447 -113375703 - AluJb SINE Alu -8 304 1 709 250 27 104 chr5 86254447 86254597 -113375553 - MIR SINE MIR -134 128 2 1981 126 7 0 chr5 86254680 86254992 -113375158 - AluSx SINE Alu 0 314 1 222 86 0 29 chr5 86255428 86255463 -113374687 + MIR SINE MIR 117 150 -112 2196 99 0 35 chr5 86255534 86255846 -113374304 - AluSx SINE Alu -5 307 7 936 153 29 24 chr5 86255852 86256022 -113374128 - FAM SINE Alu -2 173 3 565 276 91 27 chr5 86256106 86256327 -113373823 - L2 LINE L2 -4 3309 3075 1072 162 0 63 chr5 86256342 86256501 -113373649 - AluJo SINE Alu -20 292 149 2001 133 0 10 chr5 86256501 86256809 -113373341 - AluSx SINE Alu -7 305 1 1072 162 0 63 chr5 86256809 86256871 -113373279 - AluJo SINE Alu -163 149 85 2233 108 0 0 chr5 86257094 86257399 -113372751 + AluSx SINE Alu 1 305 -7 584 332 100 34 chr5 86258219 86258789 -113371361 - L2 LINE L2 -7 3306 2685 1501 170 18 21 chr5 86259969 86260252 -113369898 - AluJo SINE Alu -30 282 1 725 229 45 67 chr5 86260284 86260338 -113369812 - MIR SINE MIR -6 256 202 1607 94 111 4 chr5 86260338 86260605 -113369545 - AluSq SINE Alu 0 308 16 725 229 45 67 chr5 86260605 86260772 -113369378 - MIR SINE MIR -60 202 39 271 128 0 0 chr5 86260852 86260891 -113369259 - MIR SINE MIR -60 148 110 1431 90 15 0 chr5 86261127 86261328 -113368822 + AluSx SINE Alu 30 233 -79 683 263 0 7 chr5 86261331 86261483 -113368667 + AluJo/FRAM SINE Alu 137 287 -15 1922 114 41 3 chr5 86261691 86261981 -113368169 + AluSx SINE Alu 1 301 -11 363 297 17 0 chr5 86261981 86262099 -113368051 - L2 LINE L2 -687 2627 2508 312 271 52 10 chr5 86262105 86262201 -113367949 - L2 LINE L2 0 3313 3214 1740 144 0 0 chr5 86262228 86262492 -113367658 + AluJo SINE Alu 4 267 -45 1875 120 37 3 chr5 86262501 86262800 -113367350 + AluSx SINE Alu 3 311 -1 2255 95 10 0 chr5 86262800 86263103 -113367047 + AluSp SINE Alu 1 307 -6 2184 77 40 3 chr5 86263103 86263400 -113366750 + AluY SINE Alu 1 309 -2 528 94 0 31 chr5 86263403 86263499 -113366651 + (GGAA)n Simple_repeat Simple_repeat 4 96 0 856 248 94 17 chr5 86263574 86264085 -113366065 - L2 LINE L2 -224 3089 2526 11209 127 59 35 chr5 86264603 86266991 -113363159 - L1P3 LINE L1 -3947 2514 8 27 0 0 0 chr5 86267080 86267107 -113363043 + AT_rich Low_complexity Low_complexity 1 27 0 248 276 46 26 chr5 86267629 86267781 -113362369 + L1MC/D LINE L1 5668 5822 -1986 250 294 56 35 chr5 86267832 86268029 -113362121 + HAL1b LINE L1 712 912 -436 449 262 106 7 chr5 86268853 86268994 -113361156 - MIR SINE MIR -3 259 105 3452 229 60 52 chr5 86269068 86270121 -113360029 + L1M4 LINE L1 -248 812 -5468 815 246 26 5 chr5 86270122 86270313 -113359837 + AluJo SINE Alu 118 312 0 307 0 0 44 chr5 86270313 86270358 -113359792 + (GGAA)n Simple_repeat Simple_repeat 4 46 0 2815 237 63 42 chr5 86270358 86271270 -113358880 + L1M4 LINE L1 824 1715 -4667 1808 131 69 3 chr5 86271270 86271560 -113358590 + AluSq SINE Alu 2 310 -3 2815 237 63 42 chr5 86271560 86272950 -113357200 + L1M4 LINE L1 1715 3295 -3087 1585 81 47 4 chr5 86272950 86273214 -113356936 + AluY SINE Alu 40 313 0 2815 237 63 42 chr5 86273214 86273246 -113356904 + L1M4 LINE L1 3295 3325 -3057 3602 239 47 24 chr5 86273905 86275045 -113355105 + L1M4 LINE L1 3309 4475 -1907 1365 209 45 57 chr5 86275050 86275385 -113354765 - MLT1E3 LTR MaLR -196 428 98 605 154 0 39 chr5 86275445 86275549 -113354601 - MLT1E3 LTR MaLR -524 100 1 2114 108 3 0 chr5 86275904 86276199 -113353951 + AluSg SINE Alu 3 298 -12 896 256 25 21 chr5 86276202 86276444 -113353706 + MIR SINE MIR 19 261 -1 359 353 206 26 chr5 86276458 86277153 -113352997 - L2 LINE L2 -656 2658 1839 462 319 83 26 chr5 86277725 86277954 -113352196 - MIR SINE MIR 0 262 21 728 174 8 17 chr5 86278027 86278175 -113351975 + L1MA9 LINE L1 6008 6141 -165 1420 119 0 9 chr5 86278833 86279076 -113351074 + AluY SINE Alu 80 311 0 2026 140 3 0 chr5 86279742 86280050 -113350100 + AluSx SINE Alu 1 309 -3 2128 125 0 0 chr5 86280124 86280427 -113349723 - AluSg SINE Alu -7 303 1 22 0 0 0 chr5 86280858 86280880 -113349270 + AT_rich Low_complexity Low_complexity 1 22 0 5536 33 3 0 chr5 86282482 86283126 -113347024 + L1PA5 LINE L1 5493 6138 -16 244 94 38 0 chr5 86283128 86283181 -113346969 + (TA)n Simple_repeat Simple_repeat 2 56 0 315 0 0 0 chr5 86283183 86283218 -113346932 + (TC)n Simple_repeat Simple_repeat 2 36 0 243 0 0 0 chr5 86283217 86283244 -113346906 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 2383 133 23 0 chr5 86283691 86284045 -113346105 - THE1B LTR MaLR -2 362 1 10343 107 34 38 chr5 86284045 86285631 -113344519 - THE1B-int LTR MaLR 0 1580 1 1610 96 0 0 chr5 86285631 86285840 -113344310 - THE1B LTR MaLR 0 364 156 8030 113 11 4 chr5 86285841 86286967 -113343183 + L1P3 LINE L1 2 1135 -4740 5108 75 1 19 chr5 86286968 86287657 -113342493 + L1PA8A LINE L1 5454 6130 -1 365 83 0 0 chr5 86287663 86287711 -113342439 - THE1B LTR MaLR -194 170 123 1715 159 20 0 chr5 86287763 86288065 -113342085 - AluSx SINE Alu -3 309 2 261 83 0 0 chr5 86288513 86288549 -113341601 + (A)n Simple_repeat Simple_repeat 1 36 0 187 361 134 0 chr5 86289744 86289841 -113340309 - L2 LINE L2 -12 3260 3151 2026 117 0 25 chr5 86289962 86290279 -113339871 - AluSg SINE Alu -1 309 1 721 215 0 0 chr5 86290321 86290470 -113339680 + L1MA8 LINE L1 6124 6272 -19 2009 91 65 0 chr5 86290881 86291144 -113339006 + AluSg SINE Alu 1 319 0 261 51 0 26 chr5 86291144 86291183 -113338967 + (TAAAA)n Simple_repeat Simple_repeat 2 140 0 186 43 0 0 chr5 86291860 86291883 -113338267 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 6696 70 30 0 chr5 86291883 86292933 -113337217 - L1PA7 LINE L1 0 6154 5097 1321 111 0 55 chr5 86293226 86293443 -113336707 + L1PA8A LINE L1 5923 6127 -4 2310 89 3 0 chr5 86293635 86293928 -113336222 + AluSc SINE Alu 2 295 -14 211 231 58 0 chr5 86293976 86294028 -113336122 + MIR SINE MIR 39 93 -169 433 227 8 34 chr5 86294067 86294186 -113335964 - L2 LINE L2 -9 3304 3189 21 0 0 0 chr5 86294222 86294243 -113335907 + AT_rich Low_complexity Low_complexity 1 21 0 370 147 40 0 chr5 86295404 86295479 -113334671 - MER116 DNA Mariner -2 78 1 204 241 24 24 chr5 86295569 86295652 -113334498 + (TTATA)n Simple_repeat Simple_repeat 5 87 0 21 36 0 0 chr5 86295722 86295750 -113334400 + AT_rich Low_complexity Low_complexity 1 28 0 2020 142 90 0 chr5 86295845 86296211 -113333939 - MER57A LTR ERV1 -4 399 1 363 287 158 76 chr5 86297656 86298249 -113331901 + L1M2 LINE L1 580 1407 -5442 408 20 0 0 chr5 86298473 86298522 -113331628 + (TG)n Simple_repeat Simple_repeat 1 49 0 249 98 0 0 chr5 86299320 86299361 -113330789 + (CA)n Simple_repeat Simple_repeat 1 41 0 184 360 0 0 chr5 86301934 86301984 -113328166 - L2 LINE L2 -20 3293 3244 2328 110 0 0 chr5 86303212 86303513 -113326637 - AluSx SINE Alu -11 301 1 343 190 0 0 chr5 86304209 86304267 -113325883 - L2 LINE L2 0 3272 3215 205 247 280 65 chr5 86304678 86304771 -113325379 - L2 LINE L2 -23 3249 3137 384 279 143 53 chr5 86306445 86306803 -113323347 - L2 LINE L2 -797 2517 2128 228 253 53 13 chr5 86306902 86306977 -113323173 + L2 LINE L2 3190 3267 -5 453 158 53 26 chr5 86307452 86307566 -113322584 - MER53 DNA DNA -72 117 1 253 327 39 19 chr5 86308344 86308448 -113321702 + L2 LINE L2 2281 2386 -928 348 291 9 0 chr5 86308474 86308584 -113321566 + MER94 DNA DNA 7 117 -17 22 0 0 0 chr5 86308592 86308614 -113321536 + AT_rich Low_complexity Low_complexity 1 22 0 219 385 12 35 chr5 86308830 86308999 -113321151 + L2 LINE L2 1126 1290 -2024 541 335 186 38 chr5 86309194 86309287 -113320863 + L2 LINE L2 1557 1635 -1679 2025 145 0 0 chr5 86309287 86309591 -113320559 - AluSx SINE Alu -8 304 1 541 335 186 38 chr5 86309591 86310596 -113319554 + L2 LINE L2 1635 2817 -497 679 149 0 0 chr5 86310645 86310759 -113319391 + L1PA16 LINE L1 6044 6157 -9 30 0 0 0 chr5 86310764 86310794 -113319356 + AT_rich Low_complexity Low_complexity 1 30 0 1753 122 94 11 chr5 86311105 86311391 -113318759 + AluSg SINE Alu 1 310 0 17565 180 16 27 chr5 86311538 86314842 -113315308 - L1PA14 LINE L1 -1 7598 4355 2246 119 10 0 chr5 86314842 86315152 -113314998 - AluSq SINE Alu 0 313 1 17565 180 16 27 chr5 86315152 86316716 -113313434 - L1PA14 LINE L1 -3244 4355 2775 626 115 115 0 chr5 86316716 86316812 -113313338 - U6 snRNA snRNA 0 107 1 310 261 41 36 chr5 86316826 86317023 -113313127 + L1MDb LINE L1 1149 1353 -5063 398 274 104 54 chr5 86317030 86317248 -113312902 + L1MDb LINE L1 1211 1417 -1370 1564 178 104 0 chr5 86317248 86317518 -113312632 + AluSx SINE Alu 1 298 -14 398 274 104 54 chr5 86317518 86317601 -113312549 + L1MDb LINE L1 1417 1771 -1016 279 0 0 0 chr5 86318301 86318332 -113311818 + (TG)n Simple_repeat Simple_repeat 2 32 0 1880 94 49 4 chr5 86318338 86318604 -113311546 - AluSx SINE Alu -34 278 1 746 289 60 46 chr5 86318727 86319011 -113311139 - L3 LINE CR1 -17 1560 1273 200 250 100 0 chr5 86319026 86319086 -113311064 - L3 LINE CR1 -740 837 772 2145 98 0 7 chr5 86320046 86320331 -113309819 - AluSc SINE Alu -10 299 17 21 71 0 0 chr5 86321226 86321268 -113308882 + AT_rich Low_complexity Low_complexity 1 42 0 377 276 57 83 chr5 86321434 86321626 -113308524 + MIR SINE MIR 30 216 -46 4606 253 54 46 chr5 86322069 86322531 -113307619 - L1MEc LINE L1 -3926 2470 2013 1895 165 34 3 chr5 86322531 86322859 -113307291 + MER44D DNA MER2_type 1 608 -1 4606 253 54 46 chr5 86322859 86324007 -113306143 - L1MEc LINE L1 -4383 2013 836 213 39 0 0 chr5 86324007 86324033 -113306117 + (TTA)n Simple_repeat Simple_repeat 2 27 0 4606 253 54 46 chr5 86324033 86324571 -113305579 - L1MEc LINE L1 -5560 836 304 254 294 54 0 chr5 86426457 86426549 -113203601 - MIR SINE MIR -70 192 96 201 256 0 23 chr5 86427797 86427840 -113202310 + L2 LINE L2 3223 3264 -8 426 243 87 0 chr5 86428126 86428229 -113201921 + MIR SINE MIR 87 198 -64 1716 189 7 0 chr5 86428556 86428863 -113201287 + AluJb SINE Alu 3 311 -1 30 45 0 0 chr5 86430361 86430405 -113199745 + AT_rich Low_complexity Low_complexity 1 44 0 24 77 0 0 chr5 86430622 86430674 -113199476 + AT_rich Low_complexity Low_complexity 1 52 0 309 195 17 93 chr5 86430952 86431070 -113199080 - L1ME LINE L1 -299 5822 5714 22 35 0 0 chr5 86431240 86431269 -113198881 + AT_rich Low_complexity Low_complexity 1 29 0 2232 124 35 10 chr5 86431272 86431668 -113198482 - L1MA5A LINE L1 0 6297 5892 324 0 0 0 chr5 86431770 86431806 -113198344 + (TA)n Simple_repeat Simple_repeat 1 36 0 297 0 0 0 chr5 86432167 86432200 -113197950 + (TA)n Simple_repeat Simple_repeat 1 33 0 311 344 77 32 chr5 86432435 86432656 -113197494 - HAL1 LINE L1 -1205 1302 1072 1384 176 38 11 chr5 86432786 86433048 -113197102 - AluJo SINE Alu -8 304 36 181 261 225 65 chr5 86433512 86433650 -113196500 + L2 LINE L2 3149 3308 -5 542 101 0 0 chr5 86435318 86435397 -113194753 - MADE1 DNA Mariner -1 79 1 21 0 0 0 chr5 86435991 86436012 -113194138 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 86436272 86436295 -113193855 + AT_rich Low_complexity Low_complexity 1 23 0 243 313 12 0 chr5 86436302 86436382 -113193768 - L3b LINE CR1 -213 1370 1290 300 328 16 38 chr5 86437968 86438151 -113191999 - L1M4 LINE L1 -2104 4042 3864 26 0 0 0 chr5 86438277 86438303 -113191847 + AT_rich Low_complexity Low_complexity 1 26 0 836 277 58 13 chr5 86438346 86438725 -113191425 - L1ME3A LINE L1 -245 5925 5530 437 307 58 9 chr5 86438798 86439023 -113191127 - L1M4 LINE L1 -2325 3821 3586 275 303 119 46 chr5 86439500 86440557 -113189593 + L1ME LINE L1 4101 5234 -912 645 312 72 34 chr5 86440673 86441087 -113189063 + L1ME LINE L1 5383 5812 -358 192 40 0 0 chr5 86441753 86441778 -113188372 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2762 204 16 45 chr5 86441847 86441948 -113188202 + L1M4 LINE L1 4134 4236 -1910 1701 125 12 0 chr5 86441948 86442188 -113187962 + AluSc SINE Alu 22 264 -45 236 91 23 0 chr5 86442193 86442237 -113187913 + (TA)n Simple_repeat Simple_repeat 1 45 0 2762 204 16 45 chr5 86442237 86442812 -113187338 + L1M4 LINE L1 4240 4796 -1350 211 283 0 0 chr5 86442813 86442866 -113187284 + (TATG)n Simple_repeat Simple_repeat 2 54 0 23 86 0 0 chr5 86443817 86443875 -113186275 + AT_rich Low_complexity Low_complexity 1 58 0 262 277 182 7 chr5 86444175 86444323 -113185827 - MIR SINE MIR 0 262 89 446 319 12 38 chr5 86444376 86444536 -113185614 + MER91A DNA MER1_type 4 159 -37 186 43 0 0 chr5 86445253 86445276 -113184874 + (T)n Simple_repeat Simple_repeat 1 23 0 272 120 20 0 chr5 86446443 86446493 -113183657 + (CA)n Simple_repeat Simple_repeat 1 51 0 32 91 0 0 chr5 86447260 86447348 -113182802 + AT_rich Low_complexity Low_complexity 1 88 0 217 326 133 8 chr5 86447869 86447991 -113182159 + MIR3 SINE MIR 57 193 -15 389 305 202 27 chr5 86448070 86448441 -113181709 - L2 LINE L2 -10 3262 2827 265 240 177 0 chr5 86448587 86448683 -113181467 + MIR3 SINE MIR 91 203 -5 285 29 0 0 chr5 86449388 86449422 -113180728 + (TA)n Simple_repeat Simple_repeat 1 34 0 33 66 0 0 chr5 86449872 86449933 -113180217 + AT_rich Low_complexity Low_complexity 1 61 0 24 0 0 0 chr5 86450257 86450281 -113179869 + AT_rich Low_complexity Low_complexity 1 24 0 1878 255 75 16 chr5 86451173 86451729 -113178421 + MLT1E LTR MaLR 1 589 -4 2178 130 0 0 chr5 86451735 86452042 -113178108 + AluSc SINE Alu 1 307 -2 2080 114 4 0 chr5 86452127 86452458 -113177692 + AluSx SINE Alu 1 332 0 41 48 0 0 chr5 86454365 86454427 -113175723 + AT_rich Low_complexity Low_complexity 1 62 0 852 221 0 0 chr5 86454696 86454868 -113175282 - AluJb SINE Alu -7 305 134 399 41 0 0 chr5 86456667 86456716 -113173434 + (CA)n Simple_repeat Simple_repeat 2 50 0 193 289 13 128 chr5 86458157 86458313 -113171837 - L2 LINE L2 -115 3157 3020 416 279 179 14 chr5 86458342 86458482 -113171668 + MER5A DNA MER1_type 27 189 0 334 338 143 53 chr5 86458484 86459164 -113170986 - L2 LINE L2 -261 3011 2269 12780 173 52 27 chr5 86459210 86462212 -113167938 + L1M1 LINE L1 2 3517 -4048 7040 174 50 45 chr5 86462229 86462576 -113167574 + L1M1 LINE L1 4132 4476 -3089 1903 119 16 47 chr5 86462576 86462894 -113167256 - AluSq SINE Alu -5 308 1 7040 174 50 45 chr5 86462894 86464243 -113165907 + L1M1 LINE L1 4476 5836 -1729 1425 304 34 32 chr5 86464238 86465044 -113165106 + L1PA12 LINE L1 1559 2221 -5360 * 11728 217 21 23 chr5 86465045 86467611 -113162539 + L1MA3 LINE L1 1837 4406 -1899 303 28 0 0 chr5 86467611 86467647 -113162503 + (TAA)n Simple_repeat Simple_repeat 1 36 0 11728 217 21 23 chr5 86467647 86467857 -113162293 + L1MA3 LINE L1 4406 4615 -1690 1991 143 38 30 chr5 86467857 86467876 -113162274 + L1PA15 LINE L1 5795 5812 -353 432 37 0 0 chr5 86467876 86467930 -113162220 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 1991 143 38 30 chr5 86467930 86468275 -113161875 + L1PA15 LINE L1 5812 6162 -3 11728 217 21 23 chr5 86468275 86469974 -113160176 + L1MA3 LINE L1 4615 6305 0 231 36 0 0 chr5 86470328 86470356 -113159794 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1906 135 7 4 chr5 86470363 86470644 -113159506 - AluSx SINE Alu -30 282 1 266 309 64 0 chr5 86471492 86471586 -113158564 - MIR SINE MIR -86 176 77 1150 302 103 28 chr5 86472757 86473622 -113156528 + L2 LINE L2 2373 3308 -5 187 318 32 71 chr5 86473784 86473910 -113156240 + MIR SINE MIR 78 198 -64 23 0 0 0 chr5 86474587 86474610 -113155540 + AT_rich Low_complexity Low_complexity 1 23 0 250 177 16 32 chr5 86474707 86474769 -113155381 + (TA)n Simple_repeat Simple_repeat 2 62 0 241 349 12 0 chr5 86475128 86475211 -113154939 - L2 LINE L2 -5 3308 3225 2039 108 4 0 chr5 86475898 86476203 -113153947 + AluSg SINE Alu 2 307 0 1596 127 4 8 chr5 86477427 86477687 -113152463 - L1PA14 LINE L1 -9 6152 5894 1698 165 43 14 chr5 86478014 86478365 -113151785 + MER46B DNA MER2_type 1 236 0 273 301 7 77 chr5 86478445 86478588 -113151562 + MIR SINE MIR 20 152 -110 6625 30 2 0 chr5 86480300 86481088 -113149062 + L1PA4 LINE L1 5366 6155 0 180 0 0 0 chr5 86481608 86481628 -113148522 + (A)n Simple_repeat Simple_repeat 1 20 0 2795 201 55 1 chr5 86482602 86483255 -113146895 - L1MA4A LINE L1 -2830 3316 2629 3433 186 9 27 chr5 86483270 86484063 -113146087 + L1MA4A LINE L1 3322 4288 -1858 2490 143 38 28 chr5 86484079 86484583 -113145567 + L1MA4A LINE L1 5793 6301 -2 422 250 0 9 chr5 86484670 86484786 -113145364 + L1MA9 LINE L1 6176 6290 -22 229 328 69 46 chr5 86485958 86486089 -113144061 - L2 LINE L2 0 3272 3139 592 357 0 29 chr5 86486184 86486461 -113143689 - MLT1L LTR MaLR -18 597 329 340 284 78 0 chr5 86486550 86486666 -113143484 - MLT1L LTR MaLR -339 276 152 192 300 0 17 chr5 86486667 86486727 -113143423 + MIR SINE MIR 77 135 -73 1157 159 5 5 chr5 86486746 86486935 -113143215 + Charlie3 DNA MER1_type 1 189 -2521 * 1886 94 16 0 chr5 86486929 86487183 -113142967 + Charlie3 DNA MER1_type 2445 2702 -8 533 236 20 92 chr5 86487571 86487766 -113142384 + MER5A DNA MER1_type 9 189 0 1420 171 7 40 chr5 86488371 86488646 -113141504 + AluJb SINE Alu 31 296 -16 423 0 0 0 chr5 86489084 86489131 -113141019 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 481 322 28 17 chr5 86489766 86489943 -113140207 + L2 LINE L2 2595 2773 -541 250 356 78 11 chr5 86489975 86490065 -113140085 + MIR SINE MIR 32 127 -135 198 71 0 0 chr5 86490113 86490141 -113140009 + (CA)n Simple_repeat Simple_repeat 2 29 0 316 308 15 0 chr5 86490210 86490340 -113139810 + (TA)n Simple_repeat Simple_repeat 2 133 0 2152 115 53 34 chr5 86490374 86490526 -113139624 + THE1B LTR MaLR 1 149 -215 2169 96 7 0 chr5 86490526 86490834 -113139316 + AluY SINE Alu 1 310 0 2152 115 53 34 chr5 86490834 86491036 -113139114 + THE1B LTR MaLR 149 364 0 364 347 24 42 chr5 86491218 86491431 -113138719 + L3 LINE CR1 940 1148 -429 2254 150 5 13 chr5 86492415 86492808 -113137342 - MLT1B LTR MaLR 0 390 1 1109 241 14 28 chr5 86493064 86493350 -113136800 + MLT1A1 LTR MaLR 84 365 0 1813 153 29 19 chr5 86494978 86495286 -113134864 + AluSx SINE Alu 1 311 -1 226 355 85 26 chr5 86496177 86496366 -113133784 - MIR SINE MIR -30 232 33 21 57 0 0 chr5 86496908 86496943 -113133207 + AT_rich Low_complexity Low_complexity 1 35 0 268 352 83 70 chr5 86497185 86497569 -113132581 + L2 LINE L2 2881 3269 -3 300 379 0 0 chr5 86497961 86498056 -113132094 - MIR SINE MIR -56 152 58 422 333 102 6 chr5 86498551 86498728 -113131422 + MER91A DNA MER1_type 1 194 -2 1094 144 0 48 chr5 86499533 86499720 -113130430 - AluSg/x SINE Alu 0 312 135 308 346 120 14 chr5 86500447 86500664 -113129486 - MIR SINE MIR -3 259 20 296 222 30 118 chr5 86501211 86501356 -113128794 + MER53 DNA DNA 1 125 -64 239 53 0 26 chr5 86501356 86501394 -113128756 + (TAAAA)n Simple_repeat Simple_repeat 1 37 0 296 222 30 118 chr5 86501394 86501451 -113128699 + MER53 DNA DNA 125 185 -4 591 278 159 4 chr5 86501509 86501736 -113128414 - MIR SINE MIR 0 262 1 22 56 0 0 chr5 86501997 86502033 -113128117 + AT_rich Low_complexity Low_complexity 1 36 0 203 83 0 62 chr5 86502033 86502081 -113128069 + (TA)n Simple_repeat Simple_repeat 1 45 0 1917 162 3 0 chr5 86502400 86502709 -113127441 + AluJb SINE Alu 1 310 -2 278 311 44 77 chr5 86502765 86502948 -113127202 - MER5A DNA MER1_type -6 183 7 221 81 0 27 chr5 86503098 86503135 -113127015 + (TA)n Simple_repeat Simple_repeat 2 37 0 230 262 48 0 chr5 86503136 86503220 -113126930 - L1MC4 LINE L1 -1340 6702 6615 186 174 0 0 chr5 86503222 86503268 -113126882 + (TA)n Simple_repeat Simple_repeat 1 46 0 2145 116 3 0 chr5 86503833 86504127 -113126023 - AluSx SINE Alu -17 295 1 2504 64 3 0 chr5 86505437 86505763 -113124387 - L1PA8 LINE L1 -1 6171 5845 345 285 32 6 chr5 86505773 86505931 -113124219 + MER103 DNA DNA 4 165 -1 1924 166 8 33 chr5 86506473 86506834 -113123316 - THE1A LTR MaLR -3 352 1 21 36 0 0 chr5 86507353 86507381 -113122769 + AT_rich Low_complexity Low_complexity 1 28 0 2608 43 3 0 chr5 86511463 86511768 -113118382 + AluY SINE Alu 1 306 -5 43063 50 2 3 chr5 86511883 86518024 -113112126 + L1PA5 LINE L1 11 6148 -6 342 303 41 33 chr5 86519334 86519456 -113110694 - L2 LINE L2 0 3272 3150 474 346 39 57 chr5 86519744 86519894 -113110256 - L2 LINE L2 -466 2848 2697 204 67 0 0 chr5 86519894 86519924 -113110226 + (CA)n Simple_repeat Simple_repeat 2 31 0 474 346 39 57 chr5 86519924 86520157 -113109993 - L2 LINE L2 -617 2697 2472 185 350 43 0 chr5 86520176 86520293 -113109857 - L2 LINE L2 -1209 2105 1984 215 339 115 54 chr5 86520382 86520512 -113109638 - L2 LINE L2 -3 3269 3132 1609 190 3 7 chr5 86520663 86520952 -113109198 + AluJo SINE Alu 1 288 -24 213 132 0 0 chr5 86520952 86520990 -113109160 + (GGAGA)n Simple_repeat Simple_repeat 1 38 0 234 154 0 0 chr5 86522614 86522653 -113107497 - L2 LINE L2 -19 3253 3215 699 243 54 5 chr5 86523121 86523306 -113106844 + MIR SINE MIR 66 259 -3 31 0 0 0 chr5 86527053 86527084 -113103066 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 86527129 86527151 -113102999 + AT_rich Low_complexity Low_complexity 1 22 0 2478 73 0 0 chr5 86527378 86527678 -113102472 + AluY SINE Alu 1 300 -11 23 33 0 0 chr5 86530234 86530264 -113099886 + AT_rich Low_complexity Low_complexity 1 30 0 422 316 128 5 chr5 86530903 86531090 -113099060 + MIR SINE MIR 50 259 -3 3004 177 27 58 chr5 86531220 86532069 -113098081 + LTR1 LTR ERV1 2 785 0 378 0 0 0 chr5 86532151 86532193 -113097957 + (TG)n Simple_repeat Simple_repeat 2 43 0 320 246 44 98 chr5 86533036 86533219 -113096931 + L1MC4a LINE L1 1292 1464 -5076 241 225 113 0 chr5 86533378 86533449 -113096701 + L1MC4a LINE L1 5151 5229 -1311 647 303 64 53 chr5 86533819 86534348 -113095802 + L1MC4a LINE L1 5689 6223 -1979 276 239 15 0 chr5 86534349 86534416 -113095734 + GA-rich Low_complexity Low_complexity 2 69 0 12777 28 0 0 chr5 86534617 86536905 -113093245 + L1PA3 LINE L1 3866 6153 -2 216 0 0 0 chr5 86537006 86537030 -113093120 + (TTC)n Simple_repeat Simple_repeat 2 25 0 2074 123 3 0 chr5 86537034 86537319 -113092831 - AluSx SINE Alu -26 286 1 300 70 0 0 chr5 86537431 86537474 -113092676 + (CA)n Simple_repeat Simple_repeat 1 43 0 213 65 0 0 chr5 86537490 86537521 -113092629 + (TA)n Simple_repeat Simple_repeat 1 31 0 5478 199 26 39 chr5 86537521 86538854 -113091296 - Charlie1a DNA MER1_type -106 1349 34 2246 125 19 30 chr5 86538920 86539287 -113090863 - THE1B LTR MaLR 0 364 2 264 185 12 25 chr5 86539323 86539404 -113090746 + CT-rich Low_complexity Low_complexity 2 81 0 274 236 179 41 chr5 86539503 86539681 -113090469 + L1ME LINE L1 5407 5619 -543 2688 229 106 16 chr5 86540362 86541090 -113089060 + MER21B LTR ERV1 48 840 -23 2269 38 0 86 chr5 86541544 86541858 -113088292 + AluY SINE Alu 13 299 -12 21 0 0 0 chr5 86544170 86544191 -113085959 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr5 86544653 86544685 -113085465 + AT_rich Low_complexity Low_complexity 1 32 0 306 316 20 35 chr5 86545080 86545231 -113084919 + MIR SINE MIR 40 188 -65 9122 126 41 19 chr5 86546652 86548148 -113082002 - L1P3 LINE L1 -4923 1538 10 406 271 141 67 chr5 86548272 86548633 -113081517 - MLT1J LTR MaLR -18 493 106 232 283 110 72 chr5 86548729 86548966 -113081184 - MIR SINE MIR -15 247 2 218 294 184 57 chr5 86549153 86549381 -113080769 - L2 LINE L2 -34 3279 3023 189 259 121 0 chr5 86549372 86549430 -113080720 + L2 LINE L2 3249 3313 0 * 210 321 9 55 chr5 86550960 86551069 -113079081 + L2 LINE L2 2562 2665 -649 192 386 0 0 chr5 86551082 86551152 -113078998 - L2 LINE L2 -3 3269 3200 375 329 75 25 chr5 86551995 86552156 -113077994 + MER5A DNA MER1_type 21 189 0 2317 97 0 6 chr5 86552206 86552517 -113077633 + AluSc SINE Alu 1 309 0 561 253 121 25 chr5 86552695 86552893 -113077257 + MIR SINE MIR 44 260 -2 243 315 145 30 chr5 86554992 86555192 -113074958 - L2 LINE L2 -219 3053 2831 2009 145 0 0 chr5 86555199 86555496 -113074654 - AluSg SINE Alu -11 299 3 28 0 0 0 chr5 86556629 86556657 -113073493 + AT_rich Low_complexity Low_complexity 1 28 0 10492 102 48 1 chr5 86556781 86558290 -113071860 + THE1B-int LTR MaLR 1 1580 0 2253 107 30 35 chr5 86558290 86558656 -113071494 + THE1B LTR MaLR 1 364 0 192 324 139 0 chr5 86559117 86559225 -113070925 + L2 LINE L2 3150 3272 0 30 0 0 0 chr5 86559305 86559335 -113070815 + AT_rich Low_complexity Low_complexity 1 30 0 1599 191 31 6 chr5 86560138 86560495 -113069655 + L1PA13 LINE L1 2823 3188 -2958 516 47 0 0 chr5 86560493 86560557 -113069593 - L1PA7 LINE L1 -1751 4395 4332 * 6596 80 15 7 chr5 86560557 86562272 -113067878 + L1PA7 LINE L1 4408 6150 -4 267 301 39 29 chr5 86562805 86562908 -113067242 + MIR SINE MIR 86 189 -73 9517 187 8 21 chr5 86562910 86564145 -113066005 + L1PA13 LINE L1 3168 4418 -1745 228 35 0 0 chr5 86564145 86564174 -113065976 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9517 187 8 21 chr5 86564174 86565943 -113064207 + L1PA13 LINE L1 4418 6163 0 24 32 0 0 chr5 86565962 86565993 -113064157 + AT_rich Low_complexity Low_complexity 1 31 0 195 278 56 0 chr5 86568702 86568756 -113061394 + L2 LINE L2 3242 3298 -15 22 0 0 0 chr5 86568919 86568941 -113061209 + AT_rich Low_complexity Low_complexity 1 22 0 26 64 0 0 chr5 86568948 86568995 -113061155 + AT_rich Low_complexity Low_complexity 1 47 0 36 40 0 0 chr5 86569273 86569323 -113060827 + AT_rich Low_complexity Low_complexity 1 50 0 25 51 0 0 chr5 86569808 86569847 -113060303 + AT_rich Low_complexity Low_complexity 1 39 0 2137 120 0 0 chr5 86570765 86571081 -113059069 + AluSx SINE Alu 1 316 0 213 350 70 10 chr5 86571590 86571690 -113058460 + L2 LINE L2 3201 3306 -7 1911 136 152 11 chr5 86572457 86572832 -113057318 + MSTA LTR MaLR 1 428 0 648 330 112 0 chr5 86573033 86573318 -113056832 - L2 LINE L2 -12 3301 2985 224 366 155 19 chr5 86573513 86573945 -113056205 - L2 LINE L2 -357 2957 2467 198 0 0 0 chr5 86575690 86575712 -113054438 + (T)n Simple_repeat Simple_repeat 1 22 0 193 292 42 14 chr5 86576264 86576336 -113053814 + L3 LINE CR1 1503 1576 -1 214 333 42 33 chr5 86576444 86576564 -113053586 + L2 LINE L2 3171 3291 -22 2614 32 0 10 chr5 86578562 86578871 -113051279 - AluY SINE Alu -5 306 1 290 337 0 11 chr5 86580205 86580294 -113049856 + MIR SINE MIR 34 121 -141 645 214 40 40 chr5 86580304 86580477 -113049673 + MER5B DNA MER1_type 1 173 -5 216 0 0 0 chr5 86580754 86580778 -113049372 + (T)n Simple_repeat Simple_repeat 1 24 0 372 22 0 0 chr5 86583076 86583121 -113047029 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 193 362 17 60 chr5 86583417 86583533 -113046617 + L2 LINE L2 3137 3247 -25 394 246 123 65 chr5 86583867 86583903 -113046247 - MIR SINE MIR -72 190 158 1192 35 0 0 chr5 86583903 86584048 -113046102 - L1PA5 LINE L1 0 6154 6010 394 246 123 65 chr5 86584048 86584149 -113046001 - MIR SINE MIR -104 158 45 227 154 0 58 chr5 86584369 86584421 -113045729 - L2 LINE L2 0 3313 3265 1387 237 115 5 chr5 86587873 86588283 -113041867 - Charlie4a DNA MER1_type -3 505 51 23 0 0 0 chr5 86591229 86591252 -113038898 + AT_rich Low_complexity Low_complexity 1 23 0 238 367 89 68 chr5 86591629 86591866 -113038284 + L2 LINE L2 2971 3212 -60 23 33 0 0 chr5 86592432 86592462 -113037688 + AT_rich Low_complexity Low_complexity 1 30 0 301 303 105 67 chr5 86592704 86592942 -113037208 - MIR SINE MIR -10 252 6 586 326 51 17 chr5 86593025 86593261 -113036889 + MIR SINE MIR 1 244 -18 2043 118 0 16 chr5 86593492 86593796 -113036354 + AluSx SINE Alu 1 299 -13 472 61 98 6 chr5 86593821 86593984 -113036166 + (TA)n Simple_repeat Simple_repeat 2 179 0 376 103 85 0 chr5 86594005 86594170 -113035980 + (TA)n Simple_repeat Simple_repeat 1 179 0 25 0 0 0 chr5 86594170 86594195 -113035955 + AT_rich Low_complexity Low_complexity 1 25 0 200 111 0 28 chr5 86594499 86594535 -113035615 + (TTTG)n Simple_repeat Simple_repeat 4 38 0 1694 136 42 55 chr5 86594921 86595230 -113034920 + AluSx SINE Alu 3 307 -5 24 32 0 0 chr5 86595328 86595359 -113034791 + AT_rich Low_complexity Low_complexity 1 31 0 198 0 0 0 chr5 86595375 86595397 -113034753 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 21 0 0 0 chr5 86596299 86596320 -113033830 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 86597491 86597529 -113032621 + AT_rich Low_complexity Low_complexity 1 38 0 275 286 107 9 chr5 86597731 86597843 -113032307 + MIR3 SINE MIR 14 136 -72 618 173 63 16 chr5 86598278 86598405 -113031745 - FLAM_C SINE Alu 0 133 1 208 250 0 0 chr5 86598715 86598759 -113031391 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 390 42 0 0 chr5 86598759 86598807 -113031343 + (CA)n Simple_repeat Simple_repeat 2 49 0 191 357 42 49 chr5 86599879 86600022 -113030128 + L2 LINE L2 3121 3262 -10 2064 131 3 0 chr5 86600536 86600827 -113029323 + AluSg SINE Alu 1 292 -18 336 64 0 0 chr5 86600883 86600930 -113029220 + (GGGA)n Simple_repeat Simple_repeat 1 47 0 21 0 0 0 chr5 86600963 86600984 -113029166 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 86602802 86602839 -113027311 + AT_rich Low_complexity Low_complexity 1 37 0 318 154 39 29 chr5 86603012 86603116 -113027034 + (TA)n Simple_repeat Simple_repeat 2 106 0 202 58 0 96 chr5 86603141 86603193 -113026957 + (GAA)n Simple_repeat Simple_repeat 1 47 0 381 43 0 0 chr5 86603486 86603533 -113026617 + (TA)n Simple_repeat Simple_repeat 2 48 0 534 16 0 0 chr5 86603534 86603597 -113026553 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 351 317 7 35 chr5 86605640 86605782 -113024368 - MER5B DNA MER1_type -40 138 1 434 145 0 12 chr5 86605821 86605904 -113024246 + (TTCC)n Simple_repeat Simple_repeat 1 82 0 184 273 65 39 chr5 86606789 86606866 -113023284 - L2 LINE L2 -202 3070 2992 370 110 171 0 chr5 86607354 86607436 -113022714 + MER53 DNA DNA 94 189 0 762 264 92 22 chr5 86607742 86607969 -113022181 - MIR SINE MIR -12 250 8 268 276 83 0 chr5 86608464 86608620 -113021530 - L1ME3A LINE L1 -14 6156 5988 628 255 130 56 chr5 86608722 86609114 -113021036 - L1ME3A LINE L1 -216 5954 5534 278 188 0 218 chr5 86610478 86610643 -113019507 + L1ME1 LINE L1 35 163 -6233 2230 268 119 23 chr5 86610654 86611707 -113018443 + L1ME1 LINE L1 241 1394 -5002 299 219 184 0 chr5 86611765 86611879 -113018271 + L1ME1 LINE L1 4965 5099 -1116 824 242 35 17 chr5 86611888 86612780 -113017370 + L1ME1 LINE L1 5218 6231 -4 396 59 0 0 chr5 86612836 86612887 -113017263 + (CA)n Simple_repeat Simple_repeat 1 51 0 2222 106 0 19 chr5 86613496 86613808 -113016342 - AluSg SINE Alu -4 306 1 21 57 0 0 chr5 86614473 86614508 -113015642 + AT_rich Low_complexity Low_complexity 1 35 0 1723 122 9 101 chr5 86614881 86615218 -113014932 - AluSx SINE Alu -6 306 1 1066 89 0 0 chr5 86615218 86615353 -113014797 - AluSq/x SINE Alu -178 135 1 414 298 116 25 chr5 86615608 86615895 -113014255 - MLT1H LTR MaLR -114 295 22 516 287 177 45 chr5 86616245 86616284 -113013866 - HAL1 LINE L1 -592 1915 1883 2276 101 3 0 chr5 86616284 86616590 -113013560 - AluSx SINE Alu -5 307 1 516 287 177 45 chr5 86616590 86617528 -113012622 - HAL1 LINE L1 -624 1883 809 982 37 60 0 chr5 86618787 86618921 -113011229 + L1PA13 LINE L1 6018 6159 -4 191 100 0 25 chr5 86619081 86619121 -113011029 + (TATG)n Simple_repeat Simple_repeat 2 40 0 333 215 51 62 chr5 86621129 86621324 -113008826 - Charlie7 DNA MER1_type -3 2609 2417 * 714 261 104 36 chr5 86621314 86621670 -113008480 - Charlie7 DNA MER1_type -1888 724 345 328 353 22 7 chr5 86622070 86622206 -113007944 + L2 LINE L2 3175 3312 -1 528 37 0 37 chr5 86622325 86622407 -113007743 + (TTTCC)n Simple_repeat Simple_repeat 2 80 0 2372 125 30 8 chr5 86622409 86622808 -113007342 - L1PB1 LINE L1 0 6151 5744 303 255 222 0 chr5 86623312 86623465 -113006685 - MER115 DNA AcHobo -2 691 505 928 336 17 3 chr5 86623618 86623913 -113006237 - MER115 DNA AcHobo -394 299 1 23 0 0 0 chr5 86625654 86625677 -113004473 + AT_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr5 86625921 86625950 -113004200 + AT_rich Low_complexity Low_complexity 1 29 0 274 320 0 20 chr5 86625972 86626072 -113004078 - L2 LINE L2 -4 3309 3212 220 300 0 0 chr5 86626228 86626288 -113003862 - L2 LINE L2 -4 3309 3250 222 175 32 32 chr5 86627888 86627951 -113002199 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 1009 305 56 47 chr5 86628036 86628803 -113001347 - L2 LINE L2 0 3313 2523 270 212 0 45 chr5 86628818 86628884 -113001266 - L2 LINE L2 -1505 1809 1747 221 355 0 0 chr5 86628898 86628974 -113001176 + CT-rich Low_complexity Low_complexity 2 77 0 403 264 138 63 chr5 86630229 86630562 -112999588 + L2 LINE L2 2526 2883 -431 3437 189 38 13 chr5 86630783 86631498 -112998652 - L1MD2 LINE L1 -24 6335 5603 430 252 39 16 chr5 86631516 86631643 -112998507 + L2 LINE L2 3182 3311 -2 38 0 0 0 chr5 86632329 86632367 -112997783 + AT_rich Low_complexity Low_complexity 1 38 0 2008 125 4 0 chr5 86632368 86632649 -112997501 - AluSq SINE Alu -31 282 1 248 310 88 23 chr5 86633293 86633304 -112996846 + MER5A DNA MER1_type 4 13 -176 974 207 6 0 chr5 86633304 86633478 -112996672 + MER5B DNA MER1_type 1 175 -3 248 310 88 23 chr5 86633478 86633637 -112996513 + MER5A DNA MER1_type 13 185 -4 1767 184 7 7 chr5 86633854 86634188 -112995962 + AluJo SINE Alu 1 312 0 558 117 0 0 chr5 86634271 86634348 -112995802 + LTR32 LTR ERVL 9 85 -386 1202 181 26 18 chr5 86634363 86634590 -112995560 + LTR32 LTR ERVL 243 471 0 1241 273 38 11 chr5 86634592 86634958 -112995192 + HERVL32 LTR ERVL 16 391 -3027 1575 244 29 37 chr5 86635033 86635487 -112994663 + HERVL32 LTR ERVL 652 1101 -2317 1574 247 40 34 chr5 86635561 86636030 -112994120 + HERVL32 LTR ERVL 1240 1711 -1707 402 192 181 82 chr5 86636019 86636201 -112993949 + HERVL32 LTR ERVL 2350 2549 -869 * 360 268 48 42 chr5 86636180 86636348 -112993802 + PRIMA41-int LTR ERV1 6297 6465 -1291 * 596 231 93 11 chr5 86636324 86636506 -112993644 + HERVL32 LTR ERVL 3221 3417 -1 234 100 0 75 chr5 86636508 86636548 -112993602 + LTR32 LTR ERVL 14 50 -421 * 1121 188 45 18 chr5 86636546 86636769 -112993381 + LTR32 LTR ERVL 243 471 0 329 278 111 32 chr5 86637337 86637463 -112992687 - MER5A DNA MER1_type 0 189 54 520 68 83 0 chr5 86637736 86637869 -112992281 + (TA)n Simple_repeat Simple_repeat 2 145 0 321 172 0 0 chr5 86638277 86638341 -112991809 + (TG)n Simple_repeat Simple_repeat 2 65 0 25 0 0 0 chr5 86638357 86638382 -112991768 + AT_rich Low_complexity Low_complexity 1 25 0 4013 172 60 5 chr5 86638469 86639295 -112990855 + L1MC2 LINE L1 5463 6334 -10 423 287 174 1 chr5 86639733 86639879 -112990271 - MER5A DNA MER1_type -1 188 9 288 371 10 0 chr5 86640192 86640289 -112989861 - MIR SINE MIR -145 117 20 185 313 98 27 chr5 86641194 86641306 -112988844 + L2 LINE L2 2965 3084 -188 291 364 68 18 chr5 86641645 86641865 -112988285 + L3 LINE CR1 1345 1575 -2 806 319 33 0 chr5 86642184 86642425 -112987725 + MIR SINE MIR 1 249 -13 1810 155 23 19 chr5 86643694 86643820 -112986330 + AluJb SINE Alu 1 125 -187 279 0 0 0 chr5 86643820 86643851 -112986299 + (CA)n Simple_repeat Simple_repeat 2 32 0 1810 155 23 19 chr5 86643851 86644034 -112986116 + AluJb SINE Alu 125 311 -1 234 332 62 44 chr5 86644626 86644852 -112985298 - MIR SINE MIR -13 249 20 21 0 0 0 chr5 86644995 86645016 -112985134 + AT_rich Low_complexity Low_complexity 1 21 0 295 268 24 12 chr5 86645017 86645099 -112985051 - MIR3 SINE MIR -1 207 125 2028 114 4 4 chr5 86645369 86645690 -112984460 + AluSq SINE Alu 4 324 0 803 255 74 9 chr5 86649761 86649992 -112980158 - MLT1C LTR MaLR -16 451 206 1828 155 54 59 chr5 86650088 86650475 -112979675 + MLT1B LTR MaLR 5 389 -1 204 273 25 83 chr5 86650638 86650759 -112979391 - L2 LINE L2 -3177 137 24 24 32 0 0 chr5 86651018 86651049 -112979101 + AT_rich Low_complexity Low_complexity 1 31 0 333 208 0 0 chr5 86652076 86652148 -112978002 + (TA)n Simple_repeat Simple_repeat 1 72 0 300 364 71 0 chr5 86654189 86654329 -112975821 - L2 LINE L2 -6 3266 3117 277 290 229 45 chr5 86654699 86655009 -112975141 - L2 LINE L2 -609 2705 2339 245 240 0 0 chr5 86657614 86657664 -112972486 + L2 LINE L2 2485 2534 -780 583 254 95 141 chr5 86657760 86658213 -112971937 + L2 LINE L2 2878 3309 -4 462 164 0 0 chr5 86658425 86658498 -112971652 + U6 snRNA snRNA 1 73 -34 441 359 16 64 chr5 86658805 86658990 -112971160 - L2 LINE L2 -177 3095 2930 1593 125 8 0 chr5 86658990 86659230 -112970920 + AluSc SINE Alu 68 309 0 441 359 16 64 chr5 86659230 86659431 -112970719 - L2 LINE L2 -342 2930 2721 462 303 26 0 chr5 86660066 86660218 -112969932 + MER113 DNA MER1_type? 366 521 0 639 48 0 0 chr5 86661733 86661816 -112968334 + L1PA4 LINE L1 6066 6148 -7 31 26 0 0 chr5 86661934 86661972 -112968178 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 86663477 86663507 -112966643 + AT_rich Low_complexity Low_complexity 1 30 0 707 259 89 34 chr5 86663569 86663862 -112966288 + MLT1I LTR MaLR 6 314 -95 190 320 176 36 chr5 86664090 86664312 -112965838 - L2 LINE L2 -817 2497 2245 22 0 0 0 chr5 86665855 86665877 -112964273 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr5 86666030 86666078 -112964072 + AT_rich Low_complexity Low_complexity 1 48 0 25 0 0 0 chr5 86666340 86666365 -112963785 + AT_rich Low_complexity Low_complexity 1 25 0 1736 152 7 17 chr5 86666468 86666758 -112963392 - AluJb SINE Alu -25 287 1 7789 24 0 0 chr5 86667064 86668011 -112962139 - L1PA3 LINE L1 -2604 3542 2596 15318 28 0 13 chr5 86668011 86669940 -112960210 + L1PA3 LINE L1 3562 5473 -682 2835 16 0 0 chr5 86669940 86670256 -112959894 + AluYb8 SINE Alu 1 316 -2 15318 28 0 13 chr5 86670256 86670929 -112959221 + L1PA3 LINE L1 5473 6153 -2 278 277 36 36 chr5 86671040 86671152 -112958998 + L2 LINE L2 3141 3252 -20 192 93 0 70 chr5 86671175 86671218 -112958932 + MER5C DNA MER1_type 272 311 -13 384 180 23 133 chr5 86672512 86672640 -112957510 + MLT1C LTR MaLR 1 114 -391 1934 164 105 18 chr5 86672643 86673034 -112957116 + MSTB1 LTR MaLR 3 427 -5 995 256 46 26 chr5 86673045 86673396 -112956754 + MLT1C LTR MaLR 110 467 0 189 107 0 0 chr5 86673560 86673588 -112956562 + (TC)n Simple_repeat Simple_repeat 1 28 0 358 198 32 71 chr5 86673726 86673852 -112956298 + MLT1D LTR MaLR 94 214 -291 968 238 142 32 chr5 86675818 86676129 -112954021 + MER2 DNA MER2_type 1 345 0 1869 147 3 10 chr5 86676262 86676562 -112953588 - AluSx SINE Alu -14 298 1 719 294 163 56 chr5 86676632 86676800 -112953350 - L2 LINE L2 0 3313 3164 2384 62 3 0 chr5 86676800 86677092 -112953058 - AluY SINE Alu -16 295 3 719 294 163 56 chr5 86677092 86677760 -112952390 - L2 LINE L2 -149 3164 2364 234 375 0 10 chr5 86678069 86678173 -112951977 + MIR SINE MIR 46 148 -114 349 278 49 35 chr5 86678364 86678508 -112951642 - MIR SINE MIR -41 221 76 1870 178 31 29 chr5 86678902 86679256 -112950894 + MLT2C1 LTR ERVL 1 358 -39 426 20 0 0 chr5 86679256 86679307 -112950843 + (CA)n Simple_repeat Simple_repeat 2 52 0 1870 178 31 29 chr5 86679307 86679335 -112950815 + MLT2C1 LTR ERVL 358 384 -13 648 128 32 24 chr5 86679977 86680102 -112950048 + L1 LINE L1 8 133 -7432 * 4057 116 120 10 chr5 86680099 86680790 -112949360 + L1 LINE L1 1099 1865 -5700 577 221 0 0 chr5 86680781 86680912 -112949238 + L1 LINE L1 4235 4365 -3200 * 5430 105 69 22 chr5 86680909 86681805 -112948345 + L1MA3 LINE L1 5367 6304 -1 22 70 0 0 chr5 86682576 86682619 -112947531 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr5 86682747 86682788 -112947362 + AT_rich Low_complexity Low_complexity 1 41 0 1775 212 49 4 chr5 86684206 86684711 -112945439 - L1M2 LINE L1 -743 5403 4955 * 3418 180 52 12 chr5 86684710 86685436 -112944714 + L1MA9 LINE L1 5519 6273 -39 273 350 0 17 chr5 86686336 86686453 -112943697 - MARNA DNA Mariner -386 200 86 21 0 0 0 chr5 86686963 86686984 -112943166 + AT_rich Low_complexity Low_complexity 1 21 0 27 49 0 0 chr5 86687566 86687607 -112942543 + AT_rich Low_complexity Low_complexity 1 41 0 4845 130 26 2 chr5 86688744 86689592 -112940558 + L1PA16 LINE L1 5254 6156 -10 595 148 79 0 chr5 86689606 86689707 -112940443 - MER33 DNA MER1_type -215 109 1 30 45 0 0 chr5 86690874 86690918 -112939232 + AT_rich Low_complexity Low_complexity 1 44 0 222 304 38 13 chr5 86691435 86691514 -112938636 + GA-rich Low_complexity Low_complexity 4 84 0 2331 93 3 0 chr5 86691947 86692248 -112937902 - AluSp SINE Alu -11 302 1 324 0 0 0 chr5 86692305 86692341 -112937809 + (TG)n Simple_repeat Simple_repeat 1 36 0 205 260 286 0 chr5 86692534 86692611 -112937539 + MER5B DNA MER1_type 2 100 -78 298 333 60 0 chr5 86693454 86693571 -112936579 - MIR SINE MIR -53 209 86 287 320 131 13 chr5 86694759 86694912 -112935238 + MER5A DNA MER1_type 13 183 -6 604 305 63 63 chr5 86695167 86695597 -112934553 + MLT1L LTR MaLR 168 597 -18 512 295 8 16 chr5 86697069 86697198 -112932952 + L2 LINE L2 3140 3267 -5 249 33 0 0 chr5 86699687 86699717 -112930433 + (TG)n Simple_repeat Simple_repeat 2 31 0 23 33 0 0 chr5 86700194 86700224 -112929926 + AT_rich Low_complexity Low_complexity 1 30 0 690 298 101 8 chr5 86700661 86700909 -112929241 - L3 LINE CR1 -295 1282 1012 577 76 0 0 chr5 86700981 86701060 -112929090 - L1PA5 LINE L1 -2 6152 6074 441 51 0 5 chr5 86701060 86701111 -112929039 + L1P1 LINE L1 5687 5737 -418 31 26 0 0 chr5 86701686 86701724 -112928426 + AT_rich Low_complexity Low_complexity 1 38 0 1708 133 91 16 chr5 86701972 86702281 -112927869 + MER1B DNA MER1_type 4 335 -2 829 224 9 67 chr5 86703417 86703479 -112926671 - MIR SINE MIR -30 232 168 2379 49 0 39 chr5 86703479 86703786 -112926364 + AluY SINE Alu 1 295 -16 829 224 9 67 chr5 86703786 86703933 -112926217 - MIR SINE MIR -94 168 35 1901 165 14 0 chr5 86704056 86704353 -112925797 + AluJb SINE Alu 1 301 -11 1685 145 11 35 chr5 86705847 86706129 -112924021 - AluSx SINE Alu -37 275 1 1057 140 123 0 chr5 86706328 86706499 -112923651 + MER1B DNA MER1_type 33 224 -73 394 189 0 14 chr5 86706497 86706571 -112923579 + MER1B DNA MER1_type 261 333 0 * 183 295 51 64 chr5 86707257 86707335 -112922815 - L3 LINE CR1 -1317 260 184 28 61 0 0 chr5 86707426 86707475 -112922675 + AT_rich Low_complexity Low_complexity 1 49 0 202 229 21 0 chr5 86709230 86709278 -112920872 + (ATAAG)n Simple_repeat Simple_repeat 2 50 0 23 33 0 0 chr5 86709379 86709409 -112920741 + AT_rich Low_complexity Low_complexity 1 30 0 317 234 91 0 chr5 86709571 86709648 -112920502 + L2 LINE L2 3230 3313 0 818 308 120 52 chr5 86709671 86710473 -112919677 + L2 LINE L2 1790 2645 -669 690 105 15 15 chr5 86710912 86711045 -112919105 + (TCTA)n Simple_repeat Simple_repeat 2 134 0 233 317 49 37 chr5 86711062 86711144 -112919006 + L2 LINE L2 3189 3271 -1 631 95 11 0 chr5 86711353 86711448 -112918702 + AluS SINE Alu 1 96 -216 2062 134 0 13 chr5 86712641 86712955 -112917195 - AluSg SINE Alu 0 310 1 2304 81 0 10 chr5 86713750 86714059 -112916091 + AluY SINE Alu 1 306 -5 281 354 10 10 chr5 86714614 86714713 -112915437 - L2 LINE L2 -1 3271 3173 31 102 0 0 chr5 86715325 86715433 -112914717 + AT_rich Low_complexity Low_complexity 1 108 0 560 303 110 9 chr5 86716098 86716326 -112913824 + MLT1H LTR MaLR 40 290 -259 187 182 23 136 chr5 86717140 86717228 -112912922 - L3 LINE CR1 -251 1326 1249 183 222 0 44 chr5 86717358 86717403 -112912747 - L2 LINE L2 -365 2907 2865 489 181 22 0 chr5 86717623 86717761 -112912389 + (TCTA)n Simple_repeat Simple_repeat 3 143 0 451 360 159 34 chr5 86717772 86718361 -112911789 - L2 LINE L2 -25 3247 2594 244 258 16 0 chr5 86719333 86719395 -112910755 + G-rich Low_complexity Low_complexity 5 67 0 519 301 10 74 chr5 86719709 86720008 -112910142 - LTR16B LTR ERVL -12 452 173 2137 91 52 0 chr5 86720507 86720793 -112909357 - AluY SINE Alu -8 303 3 236 370 22 7 chr5 86721799 86721937 -112908213 - L2 LINE L2 -251 3021 2882 497 169 95 61 chr5 86723684 86723832 -112906318 + MER5B DNA MER1_type 1 153 -25 226 229 16 33 chr5 86723838 86723899 -112906251 + GA-rich Low_complexity Low_complexity 2 61 0 1983 150 7 3 chr5 86724196 86724503 -112905647 - AluSx SINE Alu 0 312 5 303 356 64 23 chr5 86724553 86725007 -112905143 - L2 LINE L2 0 3272 1774 236 256 47 23 chr5 86725145 86725231 -112904919 + MIR SINE MIR 170 257 -5 1728 159 13 32 chr5 86725494 86725802 -112904348 + AluSx SINE Alu 1 302 -10 220 287 178 49 chr5 86725863 86726110 -112904040 - L2 LINE L2 -1967 1347 1069 500 326 32 32 chr5 86728427 86728645 -112901505 - MIR SINE MIR -13 249 32 1952 121 3 3 chr5 86729391 86729703 -112900447 + AluSx SINE Alu 1 312 0 21 36 0 0 chr5 86730490 86730518 -112899632 + AT_rich Low_complexity Low_complexity 1 28 0 242 327 44 5 chr5 86730710 86730913 -112899237 - L1MC/D LINE L1 -316 5805 5667 368 231 39 39 chr5 86731554 86731710 -112898440 + L1ME4a LINE L1 5964 6119 -2 283 281 74 59 chr5 86732170 86732305 -112897845 - MIR SINE MIR -31 231 95 185 167 0 0 chr5 86732464 86732500 -112897650 - L2 LINE L2 -1 3312 3277 24 53 0 0 chr5 86732568 86732606 -112897544 + AT_rich Low_complexity Low_complexity 1 38 0 1650 51 0 0 chr5 86732751 86732946 -112897204 + AluY SINE Alu 87 281 -30 413 19 19 0 chr5 86732949 86733003 -112897147 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 22 0 0 0 chr5 86733683 86733705 -112896445 + AT_rich Low_complexity Low_complexity 1 22 0 32 0 0 0 chr5 86733851 86733883 -112896267 + AT_rich Low_complexity Low_complexity 1 32 0 186 189 54 0 chr5 86733987 86734024 -112896126 - MIR SINE MIR -2 260 222 276 291 121 0 chr5 86734071 86734212 -112895938 - MIR SINE MIR -59 203 46 511 287 128 20 chr5 86734910 86735105 -112895045 + MIR SINE MIR 26 241 -21 1777 168 23 0 chr5 86735628 86735932 -112894218 - AluJo SINE Alu -1 311 1 480 93 0 0 chr5 86736267 86736342 -112893808 + (CA)n Simple_repeat Simple_repeat 2 76 0 347 347 58 23 chr5 86736494 86736667 -112893483 - MIR3 SINE MIR -5 203 25 2068 105 0 24 chr5 86738105 86738399 -112891751 - AluSg SINE Alu -20 290 4 1211 185 31 13 chr5 86738670 86738988 -112891162 + MLT1A1 LTR MaLR 1 355 -10 216 316 234 19 chr5 86740496 86740654 -112889496 + MIR SINE MIR 60 251 -11 620 302 9 47 chr5 86742106 86742201 -112887949 + MIR SINE MIR 56 153 -109 1541 174 43 26 chr5 86742201 86742506 -112887644 + AluJo SINE Alu 1 310 -2 620 302 9 47 chr5 86742506 86742625 -112887525 + MIR SINE MIR 153 262 0 225 281 49 12 chr5 86743303 86743385 -112886765 - L1MC5 LINE L1 -66 7895 7811 2168 102 0 32 chr5 86743386 86743701 -112886449 - AluSg SINE Alu -5 305 1 512 308 141 27 chr5 86743906 86744345 -112885805 - L1ME3 LINE L1 -264 5898 5410 341 291 132 23 chr5 86745320 86745585 -112884565 + L2 LINE L2 2292 2585 -729 198 222 178 89 chr5 86746970 86747060 -112883090 + L2 LINE L2 3209 3306 -7 2997 234 75 5 chr5 86749197 86749978 -112880172 + L2 LINE L2 1909 2744 -570 706 294 121 41 chr5 86750120 86750484 -112879666 + L2 LINE L2 2921 3313 0 201 176 0 0 chr5 86750669 86750703 -112879447 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 410 326 60 22 chr5 86751562 86751878 -112878272 + LTR16A LTR ERVL 25 352 -98 468 216 347 5 chr5 86751998 86752188 -112877962 + MER34 LTR ERV1 11 265 -277 620 258 79 11 chr5 86752231 86752421 -112877729 + MER34 LTR ERV1 339 541 -1 676 172 6 6 chr5 86753185 86753365 -112876785 + (TA)n Simple_repeat Simple_repeat 1 180 0 260 160 20 0 chr5 86753523 86753573 -112876577 + MER3 DNA MER1_type 39 89 -120 * 297 73 12 158 chr5 86753537 86753619 -112876531 - MER3 DNA MER1_type -5 204 135 302 191 0 0 chr5 86753663 86753726 -112876424 + MLT1A1 LTR MaLR 328 390 0 642 272 67 5 chr5 86754784 86754979 -112875171 - MIR SINE MIR -51 211 5 2503 71 0 7 chr5 86755621 86755930 -112874220 + AluY SINE Alu 1 307 -4 225 154 0 0 chr5 86756058 86756097 -112874053 + (CATA)n Simple_repeat Simple_repeat 1 39 0 28 0 0 0 chr5 86756136 86756164 -112873986 + AT_rich Low_complexity Low_complexity 1 28 0 426 241 175 18 chr5 86756244 86756410 -112873740 - MIR SINE MIR -2 260 69 21 82 0 0 chr5 86756695 86756744 -112873406 + AT_rich Low_complexity Low_complexity 1 49 0 26 50 0 0 chr5 86756980 86757020 -112873130 + AT_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr5 86757143 86757168 -112872982 + AT_rich Low_complexity Low_complexity 1 25 0 321 330 65 40 chr5 86757457 86757657 -112872493 + MIR SINE MIR 53 257 -5 626 158 17 0 chr5 86758156 86758276 -112871874 - L1PA10 LINE L1 -975 5171 5050 2185 113 20 14 chr5 86758276 86758415 -112871735 + L1PA10 LINE L1 5172 5309 -859 2253 100 13 0 chr5 86758415 86758714 -112871436 + AluY SINE Alu 1 303 -8 2185 113 20 14 chr5 86758714 86759019 -112871131 + L1PA10 LINE L1 5309 5619 -549 3945 71 39 24 chr5 86759020 86759611 -112870539 - LTR14B LTR ERVK -2 606 7 3898 78 33 0 chr5 86759614 86760153 -112869997 + L1PA10 LINE L1 5610 6166 -2 367 311 220 11 chr5 86760168 86760531 -112869619 + L2 LINE L2 1819 2257 -1057 327 274 41 20 chr5 86761104 86761250 -112868900 - HAL1 LINE L1 -342 2165 2017 183 80 0 0 chr5 86761256 86761281 -112868869 + (TATG)n Simple_repeat Simple_repeat 2 26 0 1466 236 44 45 chr5 86761508 86762013 -112868137 - MLT1D LTR MaLR -1 504 1 354 80 0 0 chr5 86762429 86762479 -112867671 + (CA)n Simple_repeat Simple_repeat 2 51 0 2380 97 7 0 chr5 86762513 86762822 -112867328 + AluSp SINE Alu 1 311 -2 2411 97 0 0 chr5 86763812 86764122 -112866028 - AluY SINE Alu -1 310 1 21 100 0 0 chr5 86765143 86765213 -112864937 + AT_rich Low_complexity Low_complexity 1 70 0 471 18 0 0 chr5 86765335 86765391 -112864759 + (TG)n Simple_repeat Simple_repeat 1 56 0 308 283 6 31 chr5 86765439 86765598 -112864552 - L1ME4a LINE L1 -205 5916 5762 2082 117 0 3 chr5 86767120 86767466 -112862684 + AluSg SINE Alu 1 345 0 293 307 7 4 chr5 86768354 86768504 -112861646 + MIR SINE MIR 49 262 0 286 352 117 22 chr5 86769420 86769650 -112860500 - L2 LINE L2 -464 2850 2599 21 0 0 0 chr5 86770328 86770349 -112859801 + AT_rich Low_complexity Low_complexity 1 21 0 240 143 0 0 chr5 86770811 86770853 -112859297 + (T)n Simple_repeat Simple_repeat 1 42 0 5413 31 5 1 chr5 86770867 86771513 -112858637 - L1PA3 LINE L1 -1 6154 5507 1078 265 85 11 chr5 86772254 86772691 -112857459 - L1ME3 LINE L1 -3 6159 5691 246 62 0 0 chr5 86772831 86772863 -112857287 + (T)n Simple_repeat Simple_repeat 1 32 0 2069 68 0 51 chr5 86773624 86773971 -112856179 + AluY SINE Alu 2 333 0 251 337 21 0 chr5 86774051 86774146 -112856004 - MIR SINE MIR -73 135 39 233 297 0 40 chr5 86774857 86774931 -112855219 - L2 LINE L2 -4 3268 3198 1835 160 3 7 chr5 86775236 86775529 -112854621 + AluJo SINE Alu 1 292 -20 1258 201 29 29 chr5 86775542 86775744 -112854406 - L1MD2 LINE L1 -27 6332 6128 1483 176 120 0 chr5 86775744 86776011 -112854139 - AluJb SINE Alu -13 299 1 1258 201 29 29 chr5 86776011 86776122 -112854028 - L1MD2 LINE L1 -230 6129 6019 312 133 100 0 chr5 86776124 86776184 -112853966 - MLT1A1 LTR MaLR 0 374 309 36 40 0 0 chr5 86776188 86776238 -112853912 + AT_rich Low_complexity Low_complexity 1 50 0 1640 193 19 6 chr5 86776238 86776549 -112853601 - MLT1A1 LTR MaLR -50 315 1 2447 166 85 57 chr5 86776550 86777329 -112852821 - L1MD1 LINE L1 -225 6017 5236 629 219 29 85 chr5 86777330 86777651 -112852499 + MLT1A1 LTR MaLR 1 293 -81 323 24 0 0 chr5 86777751 86777793 -112852357 + L1P LINE L1 2728 2769 -3377 * 14109 83 8 12 chr5 86777785 86779901 -112850249 - L1P LINE L1 -3215 2931 826 916 209 134 81 chr5 86780539 86781060 -112849090 + MLT1H LTR MaLR 1 549 0 280 280 17 59 chr5 86781724 86781842 -112848308 + MER77 LTR ERV1 66 178 -427 494 284 84 42 chr5 86781859 86782169 -112847981 + MER21B LTR ERV1 126 448 -415 240 204 43 75 chr5 86783030 86783123 -112847027 + MLT1I LTR MaLR 318 407 -2 308 308 60 8 chr5 86783287 86783404 -112846746 + L3 LINE CR1 1454 1576 -1 543 242 39 0 chr5 86784014 86784142 -112846008 + MIR SINE MIR 65 197 -65 270 304 188 0 chr5 86784930 86785042 -112845108 - MIR SINE MIR -108 154 22 189 0 0 0 chr5 86785948 86785969 -112844181 + (TC)n Simple_repeat Simple_repeat 2 22 0 766 59 0 0 chr5 86785972 86786073 -112844077 - L1PA8 LINE L1 -2 6170 6070 2216 102 0 0 chr5 86786716 86787033 -112843117 + AluSx SINE Alu 1 317 0 7264 35 15 1 chr5 86787656 86789343 -112840807 + L1PA3 LINE L1 4480 6155 0 1970 125 43 0 chr5 86789536 86789815 -112840335 - AluSg SINE Alu -19 291 1 1720 164 24 17 chr5 86791425 86791739 -112838411 + AluJo SINE Alu 1 312 0 186 43 0 0 chr5 86791797 86791820 -112838330 + (A)n Simple_repeat Simple_repeat 1 23 0 359 244 0 0 chr5 86792737 86792819 -112837331 + L2 LINE L2 1783 1864 -1450 1722 128 142 0 chr5 86792838 86793182 -112836968 - L1MB3 LINE L1 -1 6182 5790 288 224 201 8 chr5 86793358 86793492 -112836658 - MER3 DNA MER1_type -19 190 31 15159 55 71 17 chr5 86793623 86795975 -112834175 - L1P LINE L1 -3667 2479 1 4259 35 2 2 chr5 86796330 86796847 -112833303 - L1PA4 LINE L1 -2 6153 5637 278 299 37 52 chr5 86796947 86797081 -112833069 - MIR SINE MIR -49 213 82 2218 106 12 26 chr5 86797712 86798053 -112832097 - MER1B DNA MER1_type 0 337 2 893 233 20 76 chr5 86798169 86798525 -112831625 + MER46C DNA MER2_type 2 337 -1 2007 128 10 7 chr5 86798979 86799276 -112830874 + AluSc SINE Alu 3 300 -9 2227 88 35 0 chr5 86799648 86799933 -112830217 + AluSx SINE Alu 1 295 -17 230 91 0 114 chr5 86800753 86800797 -112829353 - L1MA9 LINE L1 -1 6311 6273 1817 163 0 14 chr5 86800920 86801214 -112828936 + AluJo SINE Alu 1 290 -22 788 201 7 97 chr5 86801702 86802001 -112828149 - L1MDa LINE L1 -1695 4731 4460 10143 169 9 19 chr5 86802003 86805034 -112825116 - L1PB1 LINE L1 0 6867 3860 5319 148 46 2 chr5 86805953 86807533 -112822617 - L1PB1 LINE L1 -2962 3900 2253 1203 141 0 29 chr5 86809099 86809305 -112820845 - AluJb SINE Alu -20 292 93 491 200 142 17 chr5 86810099 86810219 -112819931 - MIR SINE MIR -82 180 46 506 248 147 19 chr5 86810292 86810449 -112819701 + MER5A DNA MER1_type 10 186 -3 1558 221 79 20 chr5 86810567 86810920 -112819230 + MLT1A2 LTR MaLR 1 374 0 5218 202 48 9 chr5 86811068 86812846 -112817304 - L1MDa LINE L1 -2522 3904 2054 692 251 17 11 chr5 86813596 86813771 -112816379 - MER5B DNA MER1_type 0 178 3 433 213 253 13 chr5 86813887 86814037 -112816113 + MIR SINE MIR 69 254 -8 3828 25 23 5 chr5 86815368 86815808 -112814342 - LTR7 LTR ERV1 -2 448 1 1094 159 6 11 chr5 86816373 86816555 -112813595 + MER20 DNA MER1_type 1 181 -38 1180 98 7 0 chr5 86816555 86816708 -112813442 + AluSx SINE Alu 1 154 -158 241 264 0 0 chr5 86816779 86816832 -112813318 - L2 LINE L2 0 3272 3220 244 160 93 27 chr5 86816930 86817005 -112813145 - L1MB7 LINE L1 0 6184 6105 192 135 0 0 chr5 86817199 86817236 -112812914 + (T)n Simple_repeat Simple_repeat 1 37 0 298 303 56 12 chr5 86817939 86818101 -112812049 + L2 LINE L2 3105 3273 -40 362 302 139 74 chr5 86822750 86823622 -112806528 - L1M2 LINE L1 -5734 1115 451 2514 67 0 19 chr5 86824452 86824766 -112805384 - AluSg SINE Alu -2 308 1 216 327 29 0 chr5 86831025 86831129 -112799021 + GA-rich Low_complexity Low_complexity 2 108 0 243 0 0 0 chr5 86833139 86833166 -112796984 + (TG)n Simple_repeat Simple_repeat 2 28 0 3094 89 5 0 chr5 86834805 86835208 -112794942 + L1PA7 LINE L1 5750 6154 0 231 275 181 58 chr5 86835371 86835509 -112794641 + MER5A DNA MER1_type 29 183 -6 299 265 90 27 chr5 86835915 86836138 -112794012 - L1M4 LINE L1 -2107 4039 3803 480 315 50 1 chr5 86836144 86836382 -112793768 - L1MDa LINE L1 -4443 1983 1732 9716 222 74 12 chr5 86836416 86837094 -112793056 + L1MB3 LINE L1 1 636 -5746 251 54 27 0 chr5 86837094 86837131 -112793019 + (TAA)n Simple_repeat Simple_repeat 2 39 0 9716 222 74 12 chr5 86837131 86840082 -112790068 + L1MB3 LINE L1 636 3857 -2525 4441 200 15 26 chr5 86840087 86840967 -112789183 + L1MB3 LINE L1 5287 6161 -258 1763 198 51 46 chr5 86840967 86841361 -112788789 + MSTD LTR MaLR 1 396 0 4441 200 15 26 chr5 86841361 86841615 -112788535 + L1MB3 LINE L1 6161 6416 -3 308 293 34 20 chr5 86841623 86841770 -112788380 - L1MDa LINE L1 -4879 1547 1399 600 317 78 83 chr5 86841908 86842056 -112788094 - L1MDa LINE L1 -4968 1448 1301 1525 176 19 7 chr5 86842056 86842363 -112787787 - L1MA9 LINE L1 0 6312 6002 600 317 78 83 chr5 86842363 86842923 -112787227 - L1MDa LINE L1 -5115 1301 744 22 35 0 0 chr5 86844190 86844219 -112785931 + AT_rich Low_complexity Low_complexity 1 29 0 5606 32 0 0 chr5 86844602 86845218 -112784932 - SVA Other Other 0 1386 771 24 53 0 0 chr5 86845437 86845475 -112784675 + AT_rich Low_complexity Low_complexity 1 38 0 274 311 94 39 chr5 86845984 86846150 -112784000 + MIR SINE MIR 56 231 -31 905 135 58 13 chr5 86846150 86846306 -112783844 + MER5B DNA MER1_type 1 163 -15 2093 144 0 3 chr5 86846410 86846722 -112783428 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr5 86847184 86847206 -112782944 + AT_rich Low_complexity Low_complexity 1 22 0 34 24 0 0 chr5 86847391 86847432 -112782718 + AT_rich Low_complexity Low_complexity 1 41 0 265 329 87 20 chr5 86847774 86847923 -112782227 - MIR3 SINE MIR -6 202 44 22 35 0 0 chr5 86848063 86848092 -112782058 + AT_rich Low_complexity Low_complexity 1 29 0 592 92 0 0 chr5 86848101 86848177 -112781973 + U3 snRNA snRNA 1 76 -141 14606 78 9 0 chr5 86848177 86850133 -112780017 + L1P2 LINE L1 1558 3531 -2615 9949 85 10 0 chr5 86850143 86851687 -112778463 + L1P2 LINE L1 3974 5529 -625 2335 33 40 13 chr5 86851687 86851987 -112778163 + AluY SINE Alu 1 308 -3 276 30 0 0 chr5 86851991 86852024 -112778126 + (A)n Simple_repeat Simple_repeat 1 33 0 2785 100 5 12 chr5 86853630 86854029 -112776121 + THE1C-int LTR MaLR 1184 1579 -1 2496 103 19 5 chr5 86854030 86854400 -112775750 + THE1C LTR MaLR 1 375 0 21 36 0 0 chr5 86854415 86854443 -112775707 + AT_rich Low_complexity Low_complexity 1 28 0 1688 178 3 14 chr5 86854796 86855089 -112775061 + AluJo SINE Alu 1 290 -22 21 0 0 0 chr5 86856009 86856030 -112774120 + AT_rich Low_complexity Low_complexity 1 21 0 2039 105 24 14 chr5 86856777 86857073 -112773077 - AluSq SINE Alu -14 299 1 504 350 132 36 chr5 86858221 86858467 -112771683 - L2 LINE L2 -4 3309 3088 1583 209 16 38 chr5 86858467 86858840 -112771310 - MLT1A1 LTR MaLR 0 365 1 504 350 132 36 chr5 86858840 86859411 -112770739 - L2 LINE L2 -225 3088 2404 257 276 48 67 chr5 86859586 86859691 -112770459 - MIR SINE MIR -122 140 38 453 327 31 31 chr5 86859715 86859874 -112770276 + MER91A DNA MER1_type 12 170 -26 201 314 95 48 chr5 86859873 86859978 -112770172 + MER91A DNA MER1_type 86 195 -1 * 250 241 109 51 chr5 86860946 86861083 -112769067 + MLT1H LTR MaLR 112 256 -293 222 184 0 0 chr5 86861178 86861216 -112768934 + CT-rich Low_complexity Low_complexity 4 41 0 689 237 18 24 chr5 86861513 86861682 -112768468 + MER45A DNA AcHobo 1 168 -10 647 282 59 23 chr5 86861831 86862054 -112768096 + MIR SINE MIR 18 246 -16 671 238 132 0 chr5 86862972 86863161 -112766989 + MIR SINE MIR 13 226 -36 288 0 0 0 chr5 86863217 86863249 -112766901 + (TC)n Simple_repeat Simple_repeat 2 33 0 247 134 61 0 chr5 86863249 86863331 -112766819 + (TA)n Simple_repeat Simple_repeat 1 87 0 409 246 87 0 chr5 86863994 86864120 -112766030 - L2 LINE L2 -9 3304 3168 2792 174 16 16 chr5 86864695 86865046 -112765104 + L1PB4 LINE L1 5605 5958 -198 312 69 328 0 chr5 86865046 86865104 -112765046 - MADE1 DNA Mariner -3 77 1 2792 174 16 16 chr5 86865104 86865304 -112764846 + L1PB4 LINE L1 5957 6156 0 479 203 62 8 chr5 86867049 86867177 -112762973 + MER3 DNA MER1_type 36 123 -86 1281 216 22 3 chr5 86867182 86867544 -112762606 + MER3 DNA MER1_type 2243 2611 0 1013 49 0 56 chr5 86868851 86868995 -112761155 - AluSg/x SINE Alu -2 310 175 699 193 93 0 chr5 86868995 86869145 -112761005 - MER58B DNA MER1_type -10 331 168 21 36 0 0 chr5 86869222 86869250 -112760900 + AT_rich Low_complexity Low_complexity 1 28 0 676 312 93 41 chr5 86869392 86869735 -112760415 + MLT1K LTR MaLR 204 564 -24 601 322 52 15 chr5 86870890 86871157 -112758993 - LTR16C LTR ERVL -82 409 133 22 0 0 0 chr5 86871302 86871324 -112758826 + AT_rich Low_complexity Low_complexity 1 22 0 302 260 73 0 chr5 86872509 86872632 -112757518 - L1ME4a LINE L1 -223 5898 5767 873 300 4 4 chr5 86872734 86872964 -112757186 - MIR SINE MIR -26 236 7 288 342 100 0 chr5 86873056 86873246 -112756904 - L1ME4a LINE L1 -2237 5571 5363 1195 199 31 37 chr5 86873591 86873917 -112756233 - MER33 DNA MER1_type 0 324 1 196 327 0 0 chr5 86874191 86874246 -112755904 + MIR SINE MIR 49 103 -105 262 264 154 0 chr5 86874346 86874437 -112755713 + MIR SINE MIR 79 183 -79 311 232 0 61 chr5 86874506 86874588 -112755562 + MIR3 SINE MIR 123 199 -9 4956 154 24 20 chr5 86874642 86875642 -112754508 + L1PB4 LINE L1 5152 6155 -1 21 57 0 0 chr5 86875683 86875718 -112754432 + AT_rich Low_complexity Low_complexity 1 35 0 210 349 0 12 chr5 86876182 86876265 -112753885 + MIR SINE MIR 64 145 -117 2202 115 0 0 chr5 86877217 86877512 -112752638 + AluSx SINE Alu 1 295 -17 23 33 0 0 chr5 86877516 86877546 -112752604 + AT_rich Low_complexity Low_complexity 1 30 0 3491 127 3 6 chr5 86877757 86878812 -112751338 - L1P3 LINE L1 -4428 2033 784 1263 189 108 29 chr5 86879230 86879573 -112750577 - MLT1D LTR MaLR -135 370 1 182 152 61 0 chr5 86879676 86879709 -112750441 + L2 LINE L2 1993 2027 -1287 264 59 0 0 chr5 86879724 86879758 -112750392 + (T)n Simple_repeat Simple_repeat 1 34 0 1971 141 21 0 chr5 86879776 86880066 -112750084 - AluSq SINE Alu -16 297 2 2077 139 3 0 chr5 86880449 86880750 -112749400 + AluSx SINE Alu 1 302 -10 367 309 74 36 chr5 86881223 86881435 -112748715 - MARNA DNA Mariner -160 426 195 2418 76 0 22 chr5 86881435 86881752 -112748398 - AluY SINE Alu -1 310 1 367 309 74 36 chr5 86881752 86881875 -112748275 - MARNA DNA Mariner -391 195 78 306 0 0 0 chr5 86884232 86884266 -112745884 + (CA)n Simple_repeat Simple_repeat 2 35 0 22 70 0 0 chr5 86886042 86886085 -112744065 + AT_rich Low_complexity Low_complexity 1 43 0 1836 86 37 0 chr5 86886184 86886427 -112743723 + AluSc SINE Alu 44 295 -14 272 256 70 23 chr5 86887232 86887318 -112742832 - MIR SINE MIR -116 146 57 360 223 47 108 chr5 86887433 86887581 -112742569 + MLT1E2 LTR MaLR 1 139 -487 32 57 0 0 chr5 86887628 86887681 -112742469 + AT_rich Low_complexity Low_complexity 1 53 0 523 327 65 20 chr5 86888775 86889023 -112741127 - MIR SINE MIR 0 262 4 28 0 0 0 chr5 86889086 86889114 -112741036 + AT_rich Low_complexity Low_complexity 1 28 0 191 222 0 28 chr5 86889158 86889194 -112740956 - L2 LINE L2 -36 3236 3202 279 175 0 0 chr5 86889201 86889258 -112740892 + (CACCAT)n Simple_repeat Simple_repeat 6 62 0 383 260 80 0 chr5 86889274 86889374 -112740776 - MIR SINE MIR -37 225 118 246 185 15 15 chr5 86889867 86889932 -112740218 + L1M4 LINE L1 3713 3777 -2369 537 101 0 38 chr5 86890243 86890322 -112739828 - AluJ/FRAM SINE Alu -19 293 218 1804 156 0 7 chr5 86890465 86890753 -112739397 + AluSx SINE Alu 1 286 -26 345 306 49 21 chr5 86890784 86890928 -112739222 + L2 LINE L2 3162 3309 -4 945 148 0 13 chr5 86890934 86891083 -112739067 + L1MB3 LINE L1 57 203 -6225 3147 183 33 21 chr5 86891129 86892171 -112737979 + L1MB3 LINE L1 4966 6015 -448 314 205 12 0 chr5 86892171 86892254 -112737896 + (CATATA)n Simple_repeat Simple_repeat 3 86 0 1831 169 16 40 chr5 86892354 86892727 -112737423 + L1MB3 LINE L1 6092 6455 -8 207 0 0 0 chr5 86893868 86893891 -112736259 + (CATG)n Simple_repeat Simple_repeat 1 23 0 595 272 22 103 chr5 86893901 86894213 -112735937 - L2 LINE L2 -12 3301 3015 333 253 13 0 chr5 86894256 86894335 -112735815 + L1MC4 LINE L1 6624 6703 -1339 306 211 42 0 chr5 86894311 86894382 -112735768 + L1M4c LINE L1 1995 2068 -4358 * 21 0 0 0 chr5 86894386 86894407 -112735743 + AT_rich Low_complexity Low_complexity 1 21 0 271 256 133 0 chr5 86894837 86894927 -112735223 + L2 LINE L2 871 972 -2342 205 277 121 0 chr5 86895126 86895209 -112734941 + L3b LINE CR1 1104 1196 -387 1353 308 87 15 chr5 86895925 86896522 -112733628 + L2 LINE L2 358 997 -2317 182 343 148 28 chr5 86897254 86897362 -112732788 + MIR SINE MIR 34 154 -108 1602 128 52 115 chr5 86897580 86897937 -112732213 + THE1C LTR MaLR 1 332 -43 2290 108 0 0 chr5 86897937 86898242 -112731908 - AluSc SINE Alu -4 305 1 1602 128 52 115 chr5 86898242 86898284 -112731866 + THE1C LTR MaLR 332 375 0 418 271 313 0 chr5 86899026 86899218 -112730932 + MIR SINE MIR 3 254 -8 2208 42 67 7 chr5 86900017 86900300 -112729850 + AluY SINE Alu 1 300 -11 22 35 0 0 chr5 86900703 86900732 -112729418 + AT_rich Low_complexity Low_complexity 1 29 0 225 296 0 0 chr5 86901986 86902040 -112728110 + GA-rich Low_complexity Low_complexity 4 57 0 24 0 0 0 chr5 86903904 86903928 -112726222 + AT_rich Low_complexity Low_complexity 1 24 0 218 104 21 42 chr5 86906423 86906471 -112723679 + (TTTTTA)n Simple_repeat Simple_repeat 2 48 0 401 310 111 84 chr5 86906723 86907271 -112722879 + L1M2 LINE L1 841 1403 -5446 34 24 0 0 chr5 86907636 86907677 -112722473 + GC_rich Low_complexity Low_complexity 1 41 0 24 32 0 0 chr5 86907885 86907916 -112722234 + GC_rich Low_complexity Low_complexity 1 31 0 284 148 16 0 chr5 86907934 86907995 -112722155 + CT-rich Low_complexity Low_complexity 1 62 0 417 123 0 0 chr5 86908788 86908853 -112721297 + (T)n Simple_repeat Simple_repeat 1 65 0 192 77 0 0 chr5 86909173 86909199 -112720951 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 30 0 0 0 chr5 86910142 86910172 -112719978 + AT_rich Low_complexity Low_complexity 1 30 0 498 267 20 14 chr5 86910393 86910539 -112719611 - MER103 DNA DNA -3 163 17 219 182 0 23 chr5 86910634 86910678 -112719472 + A-rich Low_complexity Low_complexity 3 45 0 1588 172 29 61 chr5 86910702 86911079 -112719071 + MLT1A1 LTR MaLR 1 365 0 279 290 129 57 chr5 86911143 86911336 -112718814 + MIR SINE MIR 30 236 -26 629 242 81 0 chr5 86911616 86911765 -112718385 + MLT1E2 LTR MaLR 466 626 0 382 331 24 0 chr5 86911771 86911898 -112718252 - MIR SINE MIR -105 157 28 531 279 43 67 chr5 86911912 86912166 -112717984 - MIR SINE MIR -8 254 7 186 341 34 0 chr5 86912366 86912454 -112717696 + L2 LINE L2 2879 2969 -303 275 238 0 16 chr5 86913118 86913181 -112716969 + (TATG)n Simple_repeat Simple_repeat 3 64 0 873 293 110 8 chr5 86913303 86913702 -112716448 - L1MC/D LINE L1 -2055 5753 5314 335 313 104 34 chr5 86914081 86914378 -112715772 - L1MC/D LINE L1 -1217 4929 4612 367 307 88 56 chr5 86914438 86914551 -112715599 - L1MC/D LINE L1 -1710 4436 4328 333 100 0 0 chr5 86914551 86914601 -112715549 + (TG)n Simple_repeat Simple_repeat 1 50 0 367 307 88 56 chr5 86914601 86914829 -112715321 - L1MC/D LINE L1 -1818 4328 4084 33 43 0 0 chr5 86915837 86915884 -112714266 + AT_rich Low_complexity Low_complexity 1 47 0 453 156 229 9 chr5 86916838 86916947 -112713203 - FLAM_C SINE Alu -10 133 1 1854 157 13 0 chr5 86917212 86917517 -112712633 + AluY SINE Alu 1 309 -2 27 62 0 0 chr5 86918236 86918284 -112711866 + AT_rich Low_complexity Low_complexity 1 48 0 2352 157 65 0 chr5 86918809 86919211 -112710939 - MSTC LTR MaLR 0 428 1 1940 94 0 0 chr5 86920056 86920312 -112709838 + AluY SINE Alu 37 292 -19 517 263 71 67 chr5 86921284 86921524 -112708626 - MER102a DNA MER1_type -16 314 74 499 283 7 0 chr5 86921852 86921990 -112708160 + L1ME4a LINE L1 5521 5659 -462 324 262 74 27 chr5 86922080 86922229 -112707921 + L1ME4a LINE L1 5708 5863 -258 343 317 76 80 chr5 86922530 86922950 -112707200 - L1MC/D LINE L1 -2041 5767 5348 1776 158 17 13 chr5 86922950 86923248 -112706902 - AluJb SINE Alu -13 299 1 343 317 76 80 chr5 86923248 86923303 -112706847 - L1MC/D LINE L1 -2460 5348 5294 25 31 0 0 chr5 86923382 86923414 -112706736 + AT_rich Low_complexity Low_complexity 1 32 0 207 330 93 17 chr5 86924196 86924314 -112705836 - L2 LINE L2 -4 3268 3142 348 305 52 60 chr5 86924656 86924925 -112705225 - MLT1K LTR MaLR -11 577 311 407 305 153 26 chr5 86925412 86925644 -112704506 + L1ME4a LINE L1 5570 5852 -269 1837 151 0 7 chr5 86925644 86925935 -112704215 - AluSx SINE Alu -3 309 21 407 305 153 26 chr5 86925935 86926010 -112704140 + L1ME4a LINE L1 5852 5916 -205 26 30 0 0 chr5 86926141 86926174 -112703976 + AT_rich Low_complexity Low_complexity 1 33 0 532 337 53 5 chr5 86926813 86927003 -112703147 - MIR3 SINE MIR -8 200 2 342 260 70 0 chr5 86927132 86927232 -112702918 + MIR SINE MIR 74 180 -82 2145 138 0 3 chr5 86927638 86927950 -112702200 - AluSx SINE Alu -1 311 1 332 315 102 0 chr5 86928480 86928607 -112701543 + L3 LINE CR1 1331 1470 -107 21 95 0 0 chr5 86928900 86928963 -112701187 + AT_rich Low_complexity Low_complexity 1 63 0 38 51 0 0 chr5 86929261 86929320 -112700830 + AT_rich Low_complexity Low_complexity 1 59 0 194 337 0 36 chr5 86929463 86929546 -112700604 + MIR3 SINE MIR 83 162 -46 604 288 119 48 chr5 86930102 86930574 -112699576 + MLT1H LTR MaLR 41 590 -5 218 269 0 108 chr5 86931357 86931450 -112698700 + L2 LINE L2 3188 3270 -2 240 187 0 77 chr5 86932289 86932380 -112697770 + A-rich Low_complexity Low_complexity 2 85 0 2188 106 0 10 chr5 86932436 86932739 -112697411 + AluSq SINE Alu 1 300 -13 23 68 0 0 chr5 86932789 86932833 -112697317 + AT_rich Low_complexity Low_complexity 1 44 0 306 206 0 16 chr5 86933254 86933317 -112696833 + L1MC4 LINE L1 7981 8042 0 572 142 19 0 chr5 86934403 86934509 -112695641 + CT-rich Low_complexity Low_complexity 4 111 0 1396 196 15 7 chr5 86934521 86934791 -112695359 - AluJo SINE Alu -36 276 5 316 235 76 76 chr5 86934983 86935102 -112695048 + MLT1I LTR MaLR 281 531 -18 1731 234 42 40 chr5 86935102 86935598 -112694552 + MLT1D LTR MaLR 1 497 -8 2054 104 0 4 chr5 86935949 86936261 -112693889 + AluSc SINE Alu 1 311 0 1723 236 20 15 chr5 86936600 86936998 -112693152 + MLT2D LTR ERVL 7 406 -8 1040 304 84 41 chr5 86937129 86937882 -112692268 + HAL1 LINE L1 446 1230 -1277 3652 121 28 20 chr5 86937889 86938525 -112691625 - L1MA3 LINE L1 -10 6295 5655 6463 229 78 12 chr5 86938528 86940289 -112689861 - L1PA3 LINE L1 0 6155 4135 1910 147 0 7 chr5 86940289 86940582 -112689568 + AluJb SINE Alu 1 291 -21 6463 229 78 12 chr5 86940582 86941589 -112688561 - L1PA3 LINE L1 -2020 4135 3196 * 6734 41 30 1 chr5 86941585 86942414 -112687736 - L1PA5 LINE L1 -1 6153 5301 1123 170 36 22 chr5 86942439 86942663 -112687487 + L1M1 LINE L1 924 1150 -6415 * 3401 194 14 49 chr5 86942657 86943357 -112686793 - L1M1 LINE L1 -6788 777 102 210 37 0 0 chr5 86943360 86943387 -112686763 + (T)n Simple_repeat Simple_repeat 1 27 0 721 293 51 33 chr5 86943506 86943957 -112686193 + HAL1 LINE L1 1261 1719 -788 2965 217 11 81 chr5 86944062 86944818 -112685332 - L1M1 LINE L1 -6851 714 12 1990 280 64 50 chr5 86944817 86945898 -112684252 + HAL1 LINE L1 1217 2320 -187 * 2553 55 0 3 chr5 86945898 86946210 -112683940 + AluY SINE Alu 1 311 0 1990 280 64 50 chr5 86946210 86946401 -112683749 + HAL1 LINE L1 2320 2507 0 185 229 21 0 chr5 86946524 86946572 -112683578 - L2 LINE L2 0 3313 3265 27 62 0 0 chr5 86947355 86947403 -112682747 + AT_rich Low_complexity Low_complexity 1 48 0 826 249 17 0 chr5 86947662 86947843 -112682307 - MER5A DNA MER1_type 0 189 6 455 255 9 9 chr5 86947953 86948059 -112682091 - MER5A DNA MER1_type -83 106 1 1385 185 29 13 chr5 86948359 86948673 -112681477 - MER33 DNA MER1_type -1 323 5 194 377 85 0 chr5 86949068 86949174 -112680976 - L2 LINE L2 -6 3307 3193 22 56 0 0 chr5 86949425 86949461 -112680689 + AT_rich Low_complexity Low_complexity 1 36 0 549 263 43 47 chr5 86949915 86950170 -112679980 + MER34B LTR ERV1 293 546 -19 1742 160 0 0 chr5 86950528 86950796 -112679354 + AluSx SINE Alu 1 268 -44 207 0 0 0 chr5 86950804 86950827 -112679323 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 22 56 0 0 chr5 86950936 86950972 -112679178 + AT_rich Low_complexity Low_complexity 1 36 0 401 193 23 11 chr5 86951131 86951219 -112678931 - MER34C LTR ERV1 -27 558 470 326 93 0 0 chr5 86951420 86951463 -112678687 - LTR40b LTR ERVL -231 231 189 625 103 0 0 chr5 86951464 86951551 -112678599 - L1PA16 LINE L1 -43 6123 6037 5604 187 55 8 chr5 86951691 86952692 -112677458 - L1PBb LINE L1 -4205 1999 1047 7139 48 6 0 chr5 86952692 86953934 -112676216 - L1PA6 LINE L1 -4 6150 4904 5604 187 55 8 chr5 86953934 86954873 -112675277 - L1PBb LINE L1 -5157 1047 5 3240 303 46 31 chr5 86954895 86956474 -112673676 - L1PBa LINE L1 -5259 1604 3 778 173 8 0 chr5 86956557 86956684 -112673466 - FLAM_A SINE Alu -5 128 1 22 0 0 0 chr5 86956690 86956712 -112673438 + AT_rich Low_complexity Low_complexity 1 22 0 237 299 65 9 chr5 86958812 86958919 -112671231 + L2 LINE L2 3155 3267 -46 1582 214 3 3 chr5 86959422 86959708 -112670442 + MLT1A1 LTR MaLR 1 286 -79 4477 173 65 49 chr5 86959708 86960762 -112669388 + MER11C LTR ERVK 1 1071 0 440 200 0 0 chr5 86960762 86960847 -112669303 + MLT1A1 LTR MaLR 281 365 0 21 36 0 0 chr5 86960853 86960881 -112669269 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr5 86960923 86960948 -112669202 + AT_rich Low_complexity Low_complexity 1 25 0 35 24 0 0 chr5 86961741 86961783 -112668367 + AT_rich Low_complexity Low_complexity 1 42 0 472 196 114 76 chr5 86961894 86962078 -112668072 + L1MC2 LINE L1 37 164 -5881 6351 129 11 46 chr5 86962127 86963248 -112666902 - Tigger1 DNA MER2_type 0 2418 1338 2823 113 18 2 chr5 86963248 86963682 -112666468 - Tigger1 DNA MER2_type -1390 1028 588 1108 199 14 5 chr5 86963675 86963886 -112666264 + Tigger1 DNA MER2_type 179 391 -2027 * 736 182 30 0 chr5 86963890 86964022 -112666128 - Tigger1 DNA MER2_type 0 2418 2283 1576 234 20 42 chr5 86964050 86964504 -112665646 + L1MC2 LINE L1 399 842 -5203 1264 192 17 7 chr5 86964503 86964794 -112665356 + L1MC2 LINE L1 1845 2138 -4426 * 1277 227 59 15 chr5 86964826 86965216 -112664934 + L1MC2 LINE L1 2229 2636 -3928 5990 237 44 19 chr5 86965255 86968527 -112661623 + L1MC2 LINE L1 3356 6738 -24 2272 106 0 3 chr5 86968558 86968869 -112661281 + AluSq SINE Alu 1 310 -3 478 29 0 29 chr5 86969538 86969608 -112660542 + (GA)n Simple_repeat Simple_repeat 2 69 0 2104 93 7 0 chr5 86970277 86970557 -112659593 - AluSg SINE Alu -5 305 24 325 304 65 22 chr5 86972090 86972239 -112657911 - MIR SINE MIR -72 190 38 330 269 45 106 chr5 86973304 86973568 -112656582 + L2 LINE L2 3066 3313 0 386 250 145 24 chr5 86974989 86975113 -112655037 + L3b LINE CR1 1343 1481 -102 1651 305 24 16 chr5 86975574 86976154 -112653996 + L1MA7 LINE L1 11 618 -4732 2147 65 0 11 chr5 86976178 86976455 -112653695 + AluY SINE Alu 2 275 -36 2565 283 52 50 chr5 86976603 86978932 -112651218 + L1MA7 LINE L1 684 2654 -3696 2291 162 13 0 chr5 86978932 86979328 -112650822 - HSMAR2 DNA Mariner -1 1301 901 1613 150 14 95 chr5 86979354 86979721 -112650429 - L1MC3 LINE L1 -7 7778 7442 1107 188 19 0 chr5 86979758 86979966 -112650184 - L1PA16 LINE L1 -20 6146 5935 533 96 0 0 chr5 86979966 86980039 -112650111 - HSMAR2 DNA Mariner -1163 139 67 292 169 46 0 chr5 86980092 86980157 -112649993 - HSMAR2 DNA Mariner -1230 72 5 12134 204 25 18 chr5 86980159 86982102 -112648048 + L1MA7 LINE L1 2653 4704 -1791 1561 63 5 27 chr5 86982102 86982325 -112647825 + L1PA6 LINE L1 5935 6152 -2 12134 204 25 18 chr5 86982325 86984124 -112646026 + L1MA7 LINE L1 4704 6489 -6 1620 187 14 7 chr5 86984212 86984506 -112645644 - AluJb SINE Alu -16 296 1 514 306 61 58 chr5 86984638 86984917 -112645233 - MLT1J LTR MaLR -89 422 140 2329 164 33 21 chr5 86984917 86985344 -112644806 - MSTB1 LTR MaLR 0 432 1 514 306 61 58 chr5 86985344 86985460 -112644690 - MLT1J LTR MaLR -371 140 26 29 47 0 0 chr5 86985870 86985913 -112644237 + AT_rich Low_complexity Low_complexity 1 43 0 25 99 0 0 chr5 86987301 86987382 -112642768 + AT_rich Low_complexity Low_complexity 1 81 0 326 220 64 43 chr5 86987752 86987893 -112642257 + L1ME4a LINE L1 5974 6117 -4 224 267 86 67 chr5 86988032 86988137 -112642013 - L2 LINE L2 -5 3267 3161 363 292 22 29 chr5 86988353 86988490 -112641660 + L3 LINE CR1 1190 1325 -252 294 284 49 0 chr5 86989710 86989791 -112640359 - L2 LINE L2 -4 3309 3225 1505 326 105 9 chr5 86989832 86990107 -112640043 - L2 LINE L2 -1818 1496 1249 2202 110 0 0 chr5 86990107 86990417 -112639733 - AluSx SINE Alu -2 310 1 1505 326 105 9 chr5 86990417 86990887 -112639263 - L2 LINE L2 -2065 1249 680 310 395 17 17 chr5 86993247 86993419 -112636731 - MIR3 SINE MIR -21 187 16 1340 214 120 40 chr5 86993498 86993932 -112636218 - MLT1D LTR MaLR 0 626 23 891 224 58 89 chr5 86994221 86994539 -112635611 + MLT2D LTR ERVL 92 399 -65 194 0 39 0 chr5 86994539 86994565 -112635585 + (TC)n Simple_repeat Simple_repeat 2 28 0 891 224 58 89 chr5 86994565 86994607 -112635543 + MLT2D LTR ERVL 399 441 -23 250 64 85 64 chr5 86994623 86994670 -112635480 + MLT2D LTR ERVL 367 414 0 252 130 0 0 chr5 86995629 86995675 -112634475 + (T)n Simple_repeat Simple_repeat 1 46 0 7807 10 11 0 chr5 86995679 86996781 -112633369 - L1PA2 LINE L1 -4 6151 5046 262 301 10 78 chr5 86997671 86997774 -112632376 - MIR SINE MIR -92 116 21 218 317 29 29 chr5 86999005 86999109 -112631041 - L2 LINE L2 -273 2999 2896 2315 146 19 3 chr5 86999109 86999472 -112630678 - THE1C LTR MaLR 0 375 7 302 309 129 71 chr5 86999624 87000003 -112630147 - L2 LINE L2 -565 2749 2349 204 152 30 30 chr5 87002588 87002654 -112627496 + (TATAA)n Simple_repeat Simple_repeat 5 70 0 231 167 0 74 chr5 87002786 87002840 -112627310 + L2 LINE L2 3223 3272 0 217 196 0 22 chr5 87003717 87003763 -112626387 + (TTA)n Simple_repeat Simple_repeat 1 45 0 1732 77 158 0 chr5 87004495 87004755 -112625395 + AluY SINE Alu 1 301 0 22 0 0 0 chr5 87005143 87005165 -112624985 + AT_rich Low_complexity Low_complexity 1 22 0 410 322 60 0 chr5 87005226 87005375 -112624775 + MIR SINE MIR 45 202 -60 235 0 0 54 chr5 87005927 87005964 -112624186 + (CAA)n Simple_repeat Simple_repeat 2 36 0 306 313 31 0 chr5 87006167 87006263 -112623887 - MLT1H LTR MaLR -89 460 362 431 244 164 17 chr5 87007322 87007528 -112622622 - MLT1H LTR MaLR -261 288 1 865 244 134 16 chr5 87007826 87008207 -112621943 + HAL1 LINE L1 1373 1798 -709 198 0 0 0 chr5 87008235 87008257 -112621893 + (GA)n Simple_repeat Simple_repeat 1 22 0 22 70 0 0 chr5 87008827 87008870 -112621280 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr5 87008884 87008912 -112621238 + AT_rich Low_complexity Low_complexity 1 28 0 229 260 40 90 chr5 87009139 87009239 -112620911 + L2 LINE L2 3219 3313 0 22 0 0 0 chr5 87009652 87009674 -112620476 + AT_rich Low_complexity Low_complexity 1 22 0 536 246 16 16 chr5 87010489 87010611 -112619539 - L2 LINE L2 -6 3307 3186 313 319 172 0 chr5 87011010 87011126 -112619024 + L2 LINE L2 3136 3271 -1 827 260 27 18 chr5 87012843 87013066 -112617084 + MER63B DNA MER1_type 4 228 -208 907 244 31 14 chr5 87013075 87013388 -112616762 + MLT1A2 LTR MaLR 8 374 0 281 171 43 0 chr5 87013388 87013457 -112616693 + MER63B DNA MER1_type 226 297 -139 593 303 111 67 chr5 87013516 87013995 -112616155 + L2 LINE L2 2181 2680 -634 560 292 36 44 chr5 87014007 87014257 -112615893 - MIR SINE MIR -3 259 12 750 279 33 66 chr5 87014419 87014902 -112615248 - MLT1C LTR MaLR 0 467 1 559 331 90 26 chr5 87014923 87015234 -112614916 + L2 LINE L2 2850 3180 -133 199 274 96 41 chr5 87018078 87018151 -112611999 + MIR SINE MIR 22 98 -164 308 129 0 228 chr5 87018167 87018268 -112611882 - L1MA3 LINE L1 0 6305 6228 584 203 68 0 chr5 87018327 87018460 -112611690 - MIR SINE MIR 0 262 121 370 170 14 35 chr5 87018668 87018809 -112611341 + CT-rich Low_complexity Low_complexity 1 138 0 218 264 55 66 chr5 87018931 87019022 -112611128 - L2 LINE L2 -42 3230 3141 1631 152 69 36 chr5 87019032 87019395 -112610755 - THE1C LTR MaLR 0 375 1 21 36 0 0 chr5 87020135 87020163 -112609987 + AT_rich Low_complexity Low_complexity 1 28 0 2487 192 43 77 chr5 87020528 87021127 -112609023 - MLT1E1 LTR MaLR -9 645 67 1567 160 28 0 chr5 87021505 87021755 -112608395 - AluJb SINE Alu -20 292 36 2180 105 10 13 chr5 87021950 87022263 -112607887 + AluSx SINE Alu 1 312 0 29 60 0 0 chr5 87022385 87022435 -112607715 + AT_rich Low_complexity Low_complexity 1 50 0 25 65 0 0 chr5 87022480 87022526 -112607624 + AT_rich Low_complexity Low_complexity 1 46 0 284 281 94 0 chr5 87022944 87023040 -112607110 + MIR SINE MIR 22 126 -136 21 0 0 0 chr5 87023127 87023148 -112607002 + AT_rich Low_complexity Low_complexity 1 21 0 2356 41 0 0 chr5 87023592 87023882 -112606268 + L1PA4 LINE L1 5864 6153 -2 457 267 82 0 chr5 87024580 87024715 -112605435 + MIR SINE MIR 65 210 -52 220 146 24 0 chr5 87024792 87024833 -112605317 + (TAA)n Simple_repeat Simple_repeat 2 43 0 422 296 148 35 chr5 87025057 87025287 -112604863 - MIR SINE MIR 0 262 7 2074 119 0 26 chr5 87025804 87026107 -112604043 - AluSx SINE Alu -17 295 1 1127 300 37 13 chr5 87026214 87026591 -112603559 + LTR40b LTR ERVL 3 388 -74 2615 160 38 57 chr5 87026592 87026942 -112603208 - MLT2B1 LTR ERVL -5 515 177 3784 149 19 39 chr5 87026942 87027691 -112602459 - MER50 LTR ERV1 0 734 1 2615 160 38 57 chr5 87027691 87027865 -112602285 - MLT2B1 LTR ERVL -343 177 1 314 137 0 0 chr5 87027888 87027939 -112602211 + LTR40a LTR ERVL 469 519 0 32 81 0 0 chr5 87029414 87029488 -112600662 + AT_rich Low_complexity Low_complexity 1 74 0 272 309 0 0 chr5 87029593 87029661 -112600489 - L2 LINE L2 -19 3253 3186 259 266 40 60 chr5 87030418 87030617 -112599533 + L1MC/D LINE L1 4076 4270 -1876 1084 270 84 40 chr5 87031154 87031639 -112598511 + L1MC/D LINE L1 5281 5787 -560 1244 182 8 151 chr5 87033217 87033568 -112596582 + MER70B LTR ERVL 1 301 -277 367 189 122 0 chr5 87033583 87033657 -112596493 + MER70B LTR ERVL 494 576 -2 206 79 0 53 chr5 87034508 87034546 -112595604 + (TATATG)n Simple_repeat Simple_repeat 5 40 0 2069 143 15 9 chr5 87035202 87035537 -112594613 - MER7A DNA MER2_type -1 345 11 296 102 20 0 chr5 87035540 87035589 -112594561 + (TA)n Simple_repeat Simple_repeat 2 51 0 285 301 12 0 chr5 87036447 87036530 -112593620 + HERVL40 LTR ERVL 5447 5530 0 1554 258 43 31 chr5 87036533 87037044 -112593106 + LTR40a LTR ERVL 3 519 0 18671 191 26 10 chr5 87037062 87041335 -112588815 - L1PA13 LINE L1 -3 6811 2067 2178 122 3 0 chr5 87041335 87041639 -112588511 + AluSc SINE Alu 1 305 -4 18671 191 26 10 chr5 87041639 87043740 -112586410 - L1PA13 LINE L1 -4747 2067 1 246 382 12 6 chr5 87043778 87043943 -112586207 + MIR SINE MIR 97 262 0 25 0 0 0 chr5 87044259 87044284 -112585866 + AT_rich Low_complexity Low_complexity 1 25 0 2080 192 23 34 chr5 87045682 87046119 -112584031 + MSTB1 LTR MaLR 1 432 0 32 26 0 0 chr5 87047194 87047233 -112582917 + AT_rich Low_complexity Low_complexity 1 39 0 1710 89 126 11 chr5 87047518 87047787 -112582363 + AluSg SINE Alu 9 308 -2 21 0 0 0 chr5 87047812 87047833 -112582317 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 87048495 87048524 -112581626 + AT_rich Low_complexity Low_complexity 1 29 0 1069 244 125 26 chr5 87048685 87049142 -112581008 + MLT1H LTR MaLR 1 574 -16 1274 314 61 51 chr5 87049160 87049784 -112580366 - MER115 DNA AcHobo -63 630 1 879 277 43 29 chr5 87049988 87050471 -112579679 - L1MEd LINE L1 -3525 2690 2201 468 287 131 36 chr5 87050478 87051423 -112578727 - L1MEd LINE L1 -4163 2233 1120 300 250 25 58 chr5 87051621 87051741 -112578409 - L1MEd LINE L1 -5492 904 789 28 0 0 0 chr5 87053640 87053668 -112576482 + AT_rich Low_complexity Low_complexity 1 28 0 242 372 34 14 chr5 87054557 87054705 -112575445 + L3 LINE CR1 1254 1404 -173 7051 112 7 2 chr5 87054978 87056046 -112574104 + L1MA1 LINE L1 5230 6302 0 26 0 0 0 chr5 87056046 87056072 -112574078 + AT_rich Low_complexity Low_complexity 1 26 0 195 309 94 40 chr5 87056195 87056344 -112573806 + MIR SINE MIR 1 157 -105 24 0 0 0 chr5 87056611 87056635 -112573515 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr5 87057783 87057813 -112572337 + AT_rich Low_complexity Low_complexity 1 30 0 275 241 164 79 chr5 87058237 87058859 -112571291 - L1MC5 LINE L1 -26 7935 7261 232 176 80 56 chr5 87059000 87059125 -112571025 - L1MC5 LINE L1 -743 7218 7091 1085 92 92 0 chr5 87059147 87059300 -112570850 + AluSx SINE Alu 1 167 -145 2092 118 3 0 chr5 87059309 87059614 -112570536 - AluSg SINE Alu -4 306 1 637 259 45 91 chr5 87059803 87060155 -112569995 + L1ME1 LINE L1 5826 6161 -5 307 322 27 40 chr5 87061201 87061350 -112568800 - MIR SINE MIR -64 198 52 24 0 0 0 chr5 87062453 87062477 -112567673 + AT_rich Low_complexity Low_complexity 1 24 0 2127 95 4 0 chr5 87063071 87063345 -112566805 + AluSx SINE Alu 6 280 -32 240 35 0 0 chr5 87063346 87063375 -112566775 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1299 176 0 72 chr5 87063395 87063674 -112566476 + AluJo SINE Alu 11 269 -43 1022 67 30 12 chr5 87063677 87063841 -112566309 + (GAAAA)n Simple_repeat Simple_repeat 3 169 0 4855 52 0 0 chr5 87063841 87064432 -112565718 + LTR10C LTR ERV1 1 591 0 285 146 0 0 chr5 87064432 87064480 -112565670 + (GGGA)n Simple_repeat Simple_repeat 1 48 0 271 250 0 0 chr5 87065067 87065119 -112565031 + MLT1C LTR MaLR 416 467 0 22 0 0 0 chr5 87065224 87065246 -112564904 + AT_rich Low_complexity Low_complexity 1 22 0 4489 148 5 12 chr5 87065246 87065548 -112564602 - L1MA4 LINE L1 0 6300 5997 1978 135 154 0 chr5 87065548 87065919 -112564231 + MSTA LTR MaLR 1 428 0 4489 148 5 12 chr5 87065919 87066418 -112563732 - L1MA4 LINE L1 -303 5997 5505 578 291 95 82 chr5 87066445 87066807 -112563343 - MLT1G1 LTR MaLR -183 412 1 205 354 137 0 chr5 87067777 87067938 -112562212 - L2 LINE L2 -173 3140 2958 1798 228 50 9 chr5 87068111 87068555 -112561595 - MLT1C LTR MaLR 0 467 6 307 276 134 15 chr5 87069076 87069210 -112560940 + MIR SINE MIR 99 248 -14 447 239 75 55 chr5 87070020 87070193 -112559957 + MIR3 SINE MIR 7 185 -23 2076 112 3 0 chr5 87070306 87070593 -112559557 + AluSx SINE Alu 1 288 -24 195 42 0 0 chr5 87070609 87070633 -112559517 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 201 398 42 31 chr5 87070823 87071014 -112559136 - MIR3 SINE MIR -6 202 10 3708 275 79 72 chr5 87071016 87071615 -112558535 + L2 LINE L2 1356 1949 -1364 1036 156 142 108 chr5 87071615 87071772 -112558378 + MLT1A1 LTR MaLR 1 151 -214 1934 121 28 7 chr5 87071772 87072097 -112558053 - AluSq SINE Alu 0 313 2 1036 156 142 108 chr5 87072097 87072292 -112557858 + MLT1A1 LTR MaLR 151 365 0 3708 275 79 72 chr5 87072292 87073140 -112557010 + L2 LINE L2 1949 2834 -479 1744 141 65 49 chr5 87073140 87073509 -112556641 + THE1C LTR MaLR 1 375 0 3708 275 79 72 chr5 87073509 87073842 -112556308 + L2 LINE L2 2834 3163 -150 28 48 0 0 chr5 87073850 87073892 -112556258 + AT_rich Low_complexity Low_complexity 1 42 0 194 416 22 0 chr5 87073929 87074018 -112556132 + L2 LINE L2 3155 3245 -27 2508 210 59 17 chr5 87074025 87074616 -112555534 + MLT1E3 LTR MaLR 9 624 0 21 36 0 0 chr5 87074888 87074916 -112555234 + AT_rich Low_complexity Low_complexity 1 28 0 2323 72 0 33 chr5 87074947 87075254 -112554896 - AluY SINE Alu -14 297 1 1759 125 4 0 chr5 87075313 87075553 -112554597 + AluSx SINE Alu 35 275 -37 187 54 54 0 chr5 87075558 87075595 -112554555 + A-rich Low_complexity Low_complexity 2 40 0 214 197 26 26 chr5 87076261 87076337 -112553813 + (TA)n Simple_repeat Simple_repeat 1 76 0 331 308 33 0 chr5 87077417 87077508 -112552642 + MIR3 SINE MIR 110 203 -5 358 100 0 0 chr5 87077977 87078027 -112552123 - L1PA8 LINE L1 -10 6162 6113 2551 91 5 3 chr5 87078027 87078607 -112551543 + L1PA8A LINE L1 5029 5609 -522 8352 150 19 8 chr5 87078869 87081150 -112549000 - L1PA11 LINE L1 -1 6173 3871 250 283 333 11 chr5 87082391 87082571 -112547579 + MIR SINE MIR 25 262 0 286 126 69 58 chr5 87082935 87083022 -112547128 + L1MA8 LINE L1 6198 6285 -6 24 0 0 0 chr5 87085599 87085623 -112544527 + AT_rich Low_complexity Low_complexity 1 24 0 55 0 0 0 chr5 87085644 87085699 -112544451 + AT_rich Low_complexity Low_complexity 1 55 0 4009 146 27 17 chr5 87085922 87086620 -112543530 - MER50 LTR ERV1 -29 705 1 1689 254 55 43 chr5 87086633 87087053 -112543097 - MLT1E LTR MaLR -2 591 162 2747 179 6 32 chr5 87087053 87087107 -112543043 - MLT2B2 LTR ERVL 0 515 461 405 0 0 0 chr5 87087107 87087152 -112542998 + (CA)n Simple_repeat Simple_repeat 2 46 0 2747 179 6 32 chr5 87087152 87087623 -112542527 - MLT2B2 LTR ERVL -54 461 4 1689 254 55 43 chr5 87087623 87087734 -112542416 - MLT1E LTR MaLR -431 162 54 1020 175 0 0 chr5 87087901 87088061 -112542089 + FRAM SINE Alu 1 158 -18 1892 149 3 0 chr5 87088135 87088424 -112541726 + AluJb SINE Alu 3 292 -20 200 200 0 0 chr5 87088518 87088558 -112541592 + T-rich Low_complexity Low_complexity 1 40 0 183 213 149 0 chr5 87089755 87089802 -112540348 + L2 LINE L2 78 131 -3183 23 33 0 0 chr5 87091191 87091221 -112538929 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr5 87092356 87092393 -112537757 + AT_rich Low_complexity Low_complexity 1 37 0 230 294 79 8 chr5 87092443 87092569 -112537581 - MLT1J LTR MaLR -28 483 349 21 36 0 0 chr5 87092952 87092980 -112537170 + AT_rich Low_complexity Low_complexity 1 28 0 23 68 0 0 chr5 87093024 87093068 -112537082 + AT_rich Low_complexity Low_complexity 1 44 0 226 301 36 0 chr5 87094326 87094409 -112535741 + L2 LINE L2 982 1067 -2247 225 200 71 29 chr5 87095273 87095343 -112534807 + MSTB LTR MaLR 2 74 -352 966 172 83 8 chr5 87095517 87095853 -112534297 + MSTB1 LTR MaLR 1 426 0 283 306 36 18 chr5 87096020 87096131 -112534019 - MIR3 SINE MIR -49 159 47 219 36 0 0 chr5 87096680 87096708 -112533442 + (TA)n Simple_repeat Simple_repeat 2 29 0 3921 194 78 15 chr5 87097071 87097851 -112532299 + MER21B LTR ERV1 2 830 -33 2198 101 0 0 chr5 87098216 87098512 -112531638 + AluY SINE Alu 1 296 -15 22 88 0 0 chr5 87098940 87098997 -112531153 + AT_rich Low_complexity Low_complexity 1 57 0 560 286 51 143 chr5 87099584 87100109 -112530041 - L2 LINE L2 -443 2871 2395 224 167 69 28 chr5 87101032 87101104 -112529046 + L2 LINE L2 2296 2370 -944 2046 125 0 7 chr5 87102817 87103112 -112527038 + AluSx SINE Alu 1 293 -19 25 0 0 0 chr5 87103222 87103247 -112526903 + AT_rich Low_complexity Low_complexity 1 25 0 2345 27 23 1 chr5 87103536 87103829 -112526321 - L1PA3 LINE L1 -87 6068 5765 26 30 0 0 chr5 87103846 87103879 -112526271 + AT_rich Low_complexity Low_complexity 1 33 0 639 201 0 0 chr5 87105881 87106015 -112524135 + (TA)n Simple_repeat Simple_repeat 1 134 0 24 53 0 0 chr5 87106145 87106183 -112523967 + AT_rich Low_complexity Low_complexity 1 38 0 4035 171 30 11 chr5 87106321 87107253 -112522897 - L1MC1 LINE L1 -351 5982 5023 1092 214 28 72 chr5 87107252 87107464 -112522686 + L1MC3 LINE L1 4660 4849 -1297 * 1480 143 110 37 chr5 87107464 87107737 -112522413 - AluJo SINE Alu -19 293 1 1092 214 28 72 chr5 87107737 87107912 -112522238 + L1MC3 LINE L1 4849 5030 -1116 339 349 73 23 chr5 87107961 87108222 -112521928 - L1M4 LINE L1 -2529 3617 3344 442 355 32 8 chr5 87108340 87108591 -112521559 - LTR16B LTR ERVL 0 464 208 1694 119 85 31 chr5 87108925 87109218 -112520932 + AluSq SINE Alu 5 313 0 2036 119 0 31 chr5 87109228 87109548 -112520602 + AluSx SINE Alu 1 311 0 2208 198 67 8 chr5 87109818 87110655 -112519495 + L1MC3 LINE L1 5353 6335 -9 282 123 35 35 chr5 87110865 87110922 -112519228 - MLT2B3 LTR ERVL 0 520 464 697 149 31 0 chr5 87110922 87111083 -112519067 + (TA)n Simple_repeat Simple_repeat 1 166 0 2356 200 70 25 chr5 87111103 87111587 -112518563 - MLT2B3 LTR ERVL -48 506 1 1399 222 147 6 chr5 87112355 87112702 -112517448 - MSTD LTR MaLR 0 396 1 482 312 7 0 chr5 87112910 87113048 -112517102 - MER82 DNA MER2_type -1 652 514 2390 76 0 3 chr5 87113142 87113443 -112516707 + AluSg1 SINE Alu 1 300 -9 22 70 0 0 chr5 87113686 87113729 -112516421 + AT_rich Low_complexity Low_complexity 1 43 0 4303 166 10 3 chr5 87113733 87114606 -112515544 - L1MA7 LINE L1 -11 6280 5296 242 239 14 14 chr5 87115162 87115233 -112514917 + GA-rich Low_complexity Low_complexity 1 71 0 22 35 0 0 chr5 87117207 87117236 -112512914 + AT_rich Low_complexity Low_complexity 1 29 0 2429 66 0 7 chr5 87117483 87117784 -112512366 - AluY SINE Alu -12 299 1 483 132 13 0 chr5 87118755 87118831 -112511319 + MADE1 DNA Mariner 4 80 0 24 53 0 0 chr5 87118874 87118912 -112511238 + AT_rich Low_complexity Low_complexity 1 38 0 251 234 32 0 chr5 87119669 87119793 -112510357 + (TA)n Simple_repeat Simple_repeat 2 129 0 216 67 0 0 chr5 87120538 87120568 -112509582 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 204 40 0 0 chr5 87120619 87120644 -112509506 + (TAAAAA)n Simple_repeat Simple_repeat 2 26 0 22 0 0 0 chr5 87122742 87122764 -112507386 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr5 87123337 87123365 -112506785 + AT_rich Low_complexity Low_complexity 1 28 0 209 333 0 0 chr5 87123446 87123515 -112506635 + MIR SINE MIR 74 142 -120 10640 200 27 16 chr5 87123798 87123813 -112506337 + L1M1 LINE L1 3524 3537 -4028 3394 62 2 7 chr5 87123813 87124263 -112505887 + LTR7 LTR ERV1 1 448 -2 10640 200 27 16 chr5 87124263 87126694 -112503456 + L1M1 LINE L1 3537 6010 -1555 655 141 87 0 chr5 87127302 87127451 -112502699 + L1M1 LINE L1 3390 3551 -4014 16883 95 34 29 chr5 87127451 87130671 -112499479 + HERVH LTR ERV1 5 2995 -4718 976 120 7 0 chr5 87130650 87130800 -112499350 + HERVH LTR ERV1 3140 3290 -4423 * 3331 123 0 6 chr5 87130790 87131295 -112498855 + HERVH LTR ERV1 3492 3993 -3720 4304 140 9 1 chr5 87131297 87131954 -112498196 + HERVH LTR ERV1 4488 5149 -2564 1173 138 84 0 chr5 87131955 87132158 -112497992 + HERVH LTR ERV1 5600 5819 -1894 902 118 98 0 chr5 87132156 87132309 -112497841 + HERVH LTR ERV1 7322 7489 -224 * 277 249 46 17 chr5 87132741 87132914 -112497236 + (TA)n Simple_repeat Simple_repeat 1 178 0 269 301 88 8 chr5 87133578 87133962 -112496188 - L1MEc LINE L1 -4912 1484 1000 186 43 0 0 chr5 87134010 87134033 -112496117 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 425 232 0 7 chr5 87134371 87134509 -112495641 + (TA)n Simple_repeat Simple_repeat 2 138 0 41 82 0 0 chr5 87134577 87134674 -112495476 + AT_rich Low_complexity Low_complexity 1 97 0 2396 33 0 0 chr5 87138693 87138967 -112491183 + AluY SINE Alu 35 308 -3 655 178 70 24 chr5 87139866 87140127 -112490023 - MSTB LTR MaLR -58 368 59 531 288 4 96 chr5 87140970 87141199 -112488951 + MIR SINE MIR 6 213 -49 30 27 0 0 chr5 87142586 87142623 -112487527 + AT_rich Low_complexity Low_complexity 1 37 0 26 82 0 0 chr5 87142829 87142890 -112487260 + AT_rich Low_complexity Low_complexity 1 61 0 6500 201 72 40 chr5 87143619 87145275 -112484875 - MER52A LTR ERV1 0 1755 46 333 188 16 0 chr5 87146298 87146362 -112483788 + L1M2 LINE L1 5714 5778 -513 2068 122 20 10 chr5 87146746 87147049 -112483101 + AluSq SINE Alu 1 306 -7 894 141 12 8 chr5 87147107 87147364 -112482786 + CT-rich Low_complexity Low_complexity 1 258 0 30 0 0 0 chr5 87148342 87148372 -112481778 + AT_rich Low_complexity Low_complexity 1 30 0 3406 208 45 17 chr5 87148393 87149200 -112480950 - L1MA9 LINE L1 -39 6273 5445 1301 239 142 0 chr5 87151694 87152109 -112478041 - L1MEc LINE L1 -5587 809 336 3869 166 10 38 chr5 87152123 87152904 -112477246 + LTR1 LTR ERV1 27 785 0 904 276 27 34 chr5 87152917 87153210 -112476940 - L1MEc LINE L1 -6068 328 38 556 271 26 20 chr5 87153753 87153904 -112476246 - MIR SINE MIR -5 257 106 2187 71 47 3 chr5 87154739 87155035 -112475115 + AluY SINE Alu 1 309 -2 260 116 47 0 chr5 87155433 87155476 -112474674 + MER105 DNA DNA 155 199 -5 24 53 0 0 chr5 87155628 87155666 -112474484 + AT_rich Low_complexity Low_complexity 1 38 0 470 221 63 34 chr5 87155960 87156105 -112474045 + MIR SINE MIR 13 161 -47 461 332 55 13 chr5 87156317 87156552 -112473598 + L3 LINE CR1 1331 1575 -2 201 330 61 9 chr5 87157690 87157805 -112472345 - MIR SINE MIR -24 238 118 2259 95 9 16 chr5 87159716 87160031 -112470119 - AluSp SINE Alu 0 313 1 362 355 6 0 chr5 87161342 87161514 -112468636 + ERVL LTR ERVL 5172 5344 -420 1642 148 97 13 chr5 87163457 87163768 -112466382 - MER1B DNA MER1_type 0 337 1 223 363 20 65 chr5 87163929 87164130 -112466020 - L2 LINE L2 -274 2998 2807 778 189 0 0 chr5 87164638 87164770 -112465380 - FLAM_C SINE Alu -11 132 1 201 355 75 9 chr5 87165661 87165768 -112464382 - L2 LINE L2 -17 3255 3142 315 247 111 12 chr5 87166068 87166230 -112463920 + L1M4 LINE L1 3230 3407 -2739 26 0 0 0 chr5 87166352 87166378 -112463772 + AT_rich Low_complexity Low_complexity 1 26 0 438 353 96 41 chr5 87166797 87167307 -112462843 + L2 LINE L2 2329 2866 -448 527 326 43 13 chr5 87167351 87167581 -112462569 + L2 LINE L2 2148 2384 -930 193 189 54 0 chr5 87167633 87167670 -112462480 - MIR SINE MIR -62 146 108 320 338 64 67 chr5 87167840 87168201 -112461949 - MLT1K LTR MaLR -221 367 8 25 65 0 0 chr5 87168449 87168495 -112461655 + AT_rich Low_complexity Low_complexity 1 46 0 734 297 74 38 chr5 87168799 87169190 -112460960 + MLT1I LTR MaLR 1 405 -4 25 65 0 0 chr5 87171587 87171633 -112458517 + AT_rich Low_complexity Low_complexity 1 46 0 246 165 22 110 chr5 87172712 87172785 -112457365 - L2 LINE L2 -108 3205 3140 2239 97 0 3 chr5 87172785 87173083 -112457067 + AluSp SINE Alu 6 302 -11 246 165 22 110 chr5 87173083 87173100 -112457050 - L2 LINE L2 -173 3140 3123 2748 147 37 26 chr5 87174388 87174879 -112455271 + MER21A LTR ERV1 427 922 -9 3163 133 14 4 chr5 87174893 87175383 -112454767 + MER21A-int LTR ERV1 4 498 -3693 2102 133 136 5 chr5 87175384 87175760 -112454390 + MSTA LTR MaLR 4 428 0 8387 177 12 35 chr5 87175762 87177369 -112452781 + MSTA-int LTR MaLR 3 1572 -8 1813 163 134 11 chr5 87177371 87177752 -112452398 + MSTA LTR MaLR 1 428 0 1340 153 34 34 chr5 87177770 87178005 -112452145 + MER21A-int LTR ERV1 498 732 -3459 * 13001 135 49 20 chr5 87178003 87179165 -112450985 + MER21A-int LTR ERV1 1919 3046 -1145 2222 118 0 0 chr5 87179165 87179469 -112450681 - AluSx SINE Alu -8 304 1 13001 135 49 20 chr5 87179469 87180515 -112449635 + MER21A-int LTR ERV1 3046 4191 0 1222 165 86 1 chr5 87180551 87180963 -112449187 + MER21A LTR ERV1 28 494 -369 24 53 0 0 chr5 87181274 87181312 -112448838 + AT_rich Low_complexity Low_complexity 1 38 0 266 263 81 0 chr5 87181597 87181696 -112448454 - MER115 DNA AcHobo -9 684 578 1525 178 11 3 chr5 87181806 87182092 -112448058 + L1PB4 LINE L1 5855 6142 -14 22 0 0 0 chr5 87182119 87182141 -112448009 + AT_rich Low_complexity Low_complexity 1 22 0 1256 250 82 25 chr5 87182168 87182850 -112447300 - L1M4 LINE L1 -740 5438 4720 190 333 21 0 chr5 87183838 87183886 -112446264 - L2 LINE L2 -86 3186 3138 481 318 154 0 chr5 87184955 87185175 -112444975 + L2 LINE L2 2880 3133 -180 6744 65 8 0 chr5 87186570 87187827 -112442323 - L1PA5 LINE L1 0 6154 4892 16320 175 42 18 chr5 87187840 87190876 -112439274 + L1M1 LINE L1 146 3257 -4308 2795 252 114 29 chr5 87190985 87191054 -112439096 - Zaphod DNA AcHobo -279 3752 3690 1532 146 60 4 chr5 87191054 87191335 -112438815 + L1MA9 LINE L1 6016 6312 0 2795 252 114 29 chr5 87191335 87192431 -112437719 - Zaphod DNA AcHobo -341 3690 2473 339 25 0 0 chr5 87192431 87192471 -112437679 + (CA)n Simple_repeat Simple_repeat 1 40 0 2795 252 114 29 chr5 87192471 87192543 -112437607 - Zaphod DNA AcHobo -1558 2473 2409 1574 268 98 17 chr5 87192538 87192813 -112437337 - Zaphod DNA AcHobo -3243 788 537 * 4228 26 6 0 chr5 87192813 87193318 -112436832 + L1PA4 LINE L1 5648 6155 0 1574 268 98 17 chr5 87193318 87193584 -112436566 - Zaphod DNA AcHobo -3494 537 203 269 356 29 19 chr5 87193634 87193738 -112436412 - MIR SINE MIR -72 136 32 1976 113 44 17 chr5 87193978 87194271 -112435879 - AluSx SINE Alu -11 301 1 240 279 66 16 chr5 87194320 87194381 -112435769 + MIR SINE MIR 20 83 -125 445 322 57 0 chr5 87194572 87194749 -112435401 + MER5A DNA MER1_type 3 189 0 21 36 0 0 chr5 87196049 87196077 -112434073 + AT_rich Low_complexity Low_complexity 1 28 0 819 300 50 32 chr5 87196274 87196651 -112433499 - MER93a LTR ERV1 0 402 19 21 95 0 0 chr5 87196719 87196782 -112433368 + AT_rich Low_complexity Low_complexity 1 63 0 22 0 0 0 chr5 87196911 87196933 -112433217 + AT_rich Low_complexity Low_complexity 1 22 0 30 69 0 39 chr5 87197382 87197484 -112432666 + AT_rich Low_complexity Low_complexity 1 98 0 23 33 0 0 chr5 87197553 87197583 -112432567 + AT_rich Low_complexity Low_complexity 1 30 0 1131 220 24 103 chr5 87198860 87199238 -112430912 - MLT1A1 LTR MaLR -17 348 1 32 0 0 0 chr5 87201511 87201543 -112428607 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 87201916 87201937 -112428213 + AT_rich Low_complexity Low_complexity 1 21 0 1334 104 0 6 chr5 87201943 87202125 -112428025 - AluSp SINE Alu -132 181 1 5221 215 25 26 chr5 87202214 87203540 -112426610 + L1 LINE L1 3975 5298 -848 40 0 0 0 chr5 87203712 87203752 -112426398 + AT_rich Low_complexity Low_complexity 1 40 0 2235 41 41 14 chr5 87205359 87205652 -112424498 + AluY SINE Alu 1 301 -10 2022 117 6 22 chr5 87205918 87206235 -112423915 + AluSx SINE Alu 1 312 0 3259 155 10 2 chr5 87207356 87207879 -112422271 + MER1A DNA MER1_type 1 527 0 918 188 78 0 chr5 87208797 87208989 -112421161 - L1PA16 LINE L1 -19 6147 5941 21 36 0 0 chr5 87210001 87210029 -112420121 + AT_rich Low_complexity Low_complexity 1 28 0 649 243 70 16 chr5 87210486 87210671 -112419479 + LTR16B LTR ERVL 270 464 0 294 337 41 49 chr5 87210821 87211186 -112418964 + ERVL LTR ERVL 5010 5371 -393 1063 272 167 10 chr5 87211329 87211719 -112418431 + LTR16B LTR ERVL 12 462 -2 344 307 13 40 chr5 87211725 87211875 -112418275 + LTR16C LTR ERVL 274 419 -72 1011 241 61 4 chr5 87211881 87212276 -112417874 + MLT1F1 LTR MaLR 1 567 0 732 183 0 7 chr5 87212340 87212477 -112417673 + Tigger1 DNA MER2_type 11 146 -2272 * 1243 153 9 14 chr5 87212475 87212698 -112417452 + Tigger1 DNA MER2_type 2197 2418 0 432 198 21 10 chr5 87212733 87212829 -112417321 - MLT1E LTR MaLR 0 593 497 280 294 37 0 chr5 87212838 87212947 -112417203 + (CATA)n Simple_repeat Simple_repeat 3 115 0 23 33 0 0 chr5 87212981 87213011 -112417139 + AT_rich Low_complexity Low_complexity 1 30 0 1732 176 0 3 chr5 87213666 87213955 -112416195 + AluJo SINE Alu 1 288 -24 578 325 84 4 chr5 87214152 87214389 -112415761 - MIR SINE MIR -4 258 3 276 303 0 18 chr5 87215033 87215142 -112415008 - L1M LINE L1 -2446 5362 5256 23 0 0 0 chr5 87215228 87215251 -112414899 + AT_rich Low_complexity Low_complexity 1 23 0 2052 125 3 7 chr5 87215477 87215780 -112414370 + AluSq SINE Alu 3 304 -9 22 0 0 0 chr5 87216606 87216628 -112413522 + AT_rich Low_complexity Low_complexity 1 22 0 32 0 0 0 chr5 87217859 87217891 -112412259 + AT_rich Low_complexity Low_complexity 1 32 0 1891 88 20 0 chr5 87218409 87218660 -112411490 - AluSp SINE Alu -3 310 55 203 348 0 0 chr5 87218918 87218987 -112411163 - L2 LINE L2 -19 3294 3226 2565 170 18 31 chr5 87219220 87219767 -112410383 - L1MA8 LINE L1 0 6291 5752 210 196 22 65 chr5 87220679 87220771 -112409379 + (AAATG)n Simple_repeat Simple_repeat 4 91 0 396 330 5 24 chr5 87221111 87221317 -112408833 + HAL1b LINE L1 339 540 -808 26 50 0 0 chr5 87221702 87221742 -112408408 + AT_rich Low_complexity Low_complexity 1 40 0 385 302 60 92 chr5 87221797 87222050 -112408100 + L1M4 LINE L1 2115 2375 -3771 1740 225 112 72 chr5 87222050 87222844 -112407306 - LTR1B LTR ERV1 0 826 1 385 302 60 92 chr5 87222844 87222865 -112407285 + L1M4 LINE L1 2375 2395 -3751 2459 55 0 3 chr5 87222865 87223174 -112406976 + AluY SINE Alu 1 308 -3 385 302 60 92 chr5 87223174 87223554 -112406596 + L1M4 LINE L1 2395 2749 -3397 575 50 30 10 chr5 87223554 87223655 -112406495 + (TA)n Simple_repeat Simple_repeat 2 104 0 695 276 166 46 chr5 87223684 87224203 -112405947 + MLT2F LTR ERVL 55 635 -28 613 256 35 77 chr5 87224274 87224586 -112405564 + MLT1G1 LTR MaLR 5 303 -227 * 674 262 162 42 chr5 87224581 87224773 -112405377 + MLT1G1 LTR MaLR 412 595 0 202 351 30 46 chr5 87226276 87226407 -112403743 - L2 LINE L2 -12 3260 3132 1048 154 0 0 chr5 87277729 87277911 -112352239 - L1M1 LINE L1 -823 5480 5299 2971 219 18 1 chr5 87277939 87278607 -112351543 - L1M1 LINE L1 -1024 5122 4444 1347 164 36 72 chr5 87278617 87278921 -112351229 - MER82 DNA MER2_type -155 498 206 444 156 0 13 chr5 87279021 87279098 -112351052 - MSTB1 LTR MaLR -354 78 3 221 0 35 0 chr5 87279099 87279128 -112351022 + (TCTA)n Simple_repeat Simple_repeat 3 32 0 22 0 0 0 chr5 87279165 87279187 -112350963 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 87279362 87279397 -112350753 + AT_rich Low_complexity Low_complexity 1 35 0 265 200 0 0 chr5 87280333 87280388 -112349762 - L1MCa LINE L1 -5480 946 892 27 0 0 0 chr5 87280788 87280815 -112349335 + AT_rich Low_complexity Low_complexity 1 27 0 30 59 0 0 chr5 87281800 87281851 -112348299 + AT_rich Low_complexity Low_complexity 1 51 0 2194 148 33 18 chr5 87281953 87282346 -112347804 + MSTB1 LTR MaLR 34 432 0 204 40 0 0 chr5 87282357 87282382 -112347768 + (CA)n Simple_repeat Simple_repeat 2 26 0 223 263 88 12 chr5 87283058 87283138 -112347012 - MIR SINE MIR -48 214 129 47 0 0 0 chr5 87283156 87283203 -112346947 + AT_rich Low_complexity Low_complexity 1 47 0 316 331 115 0 chr5 87283671 87283801 -112346349 - L1MCa LINE L1 -6117 490 346 873 194 31 5 chr5 87283846 87284037 -112346113 + THE1C LTR MaLR 180 375 0 21 36 0 0 chr5 87284340 87284368 -112345782 + AT_rich Low_complexity Low_complexity 1 28 0 203 127 70 28 chr5 87284593 87284664 -112345486 + (TATAA)n Simple_repeat Simple_repeat 2 75 0 289 164 27 0 chr5 87284668 87284741 -112345409 + (TAA)n Simple_repeat Simple_repeat 2 76 0 3946 51 0 0 chr5 87284859 87285346 -112344804 + L1PA5 LINE L1 5667 6153 -1 548 268 41 86 chr5 87285363 87285583 -112344567 - L2 LINE L2 -5 3308 3099 805 319 14 18 chr5 87286146 87286428 -112343722 + MLT1I LTR MaLR 104 384 -25 25 31 0 0 chr5 87286485 87286517 -112343633 + AT_rich Low_complexity Low_complexity 1 32 0 3240 213 33 8 chr5 87287371 87288089 -112342061 - L1MB3 LINE L1 -3 6180 5445 6885 25 1 1 chr5 87289529 87290724 -112339426 + L1PA4 LINE L1 4864 6058 -97 588 127 164 0 chr5 87290824 87290934 -112339216 + L1MA5 LINE L1 5639 5766 -534 276 122 0 0 chr5 87290963 87291004 -112339146 + 5S rRNA rRNA 12 52 -69 4379 80 5 0 chr5 87291004 87291576 -112338574 + HERVL-A2 LTR ERVL 1642 2216 -3438 22596 97 11 1 chr5 87291590 87294647 -112335503 + HERVL-A2 LTR ERVL 2565 5654 0 3050 103 11 35 chr5 87294647 87295111 -112335039 + MLT2A2 LTR ERVL 1 453 0 2380 179 13 51 chr5 87295172 87295704 -112334446 + L1MA5 LINE L1 5789 6300 0 27 29 0 0 chr5 87295710 87295744 -112334406 + AT_rich Low_complexity Low_complexity 1 34 0 2104 120 0 3 chr5 87296024 87296334 -112333816 - AluSx SINE Alu 0 309 1 367 369 75 4 chr5 87296348 87296589 -112333561 + L2 LINE L2 2708 2965 -349 2235 127 14 11 chr5 87296592 87296953 -112333197 + THE1B LTR MaLR 1 362 -2 10438 107 37 5 chr5 87296955 87298485 -112331665 + THE1B-int LTR MaLR 1 1580 0 2538 118 3 6 chr5 87298487 87298850 -112331300 + THE1B LTR MaLR 3 364 0 1419 282 60 54 chr5 87299339 87300190 -112329960 + HAL1 LINE L1 1356 2211 -296 711 261 38 57 chr5 87300401 87300665 -112329485 - MLT1I LTR MaLR -58 351 93 211 266 234 0 chr5 87300912 87301006 -112329144 - MIR SINE MIR -56 206 91 224 209 0 0 chr5 87301064 87301107 -112329043 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 1747 141 3 39 chr5 87302295 87302601 -112327549 - AluSx SINE Alu -17 295 1 1821 141 18 3 chr5 87302678 87302962 -112327188 - AluSx SINE Alu -24 288 1 222 250 25 0 chr5 87303841 87303921 -112326229 + (TA)n Simple_repeat Simple_repeat 1 82 0 2345 110 0 0 chr5 87304037 87304345 -112325805 + AluSx SINE Alu 2 309 -3 24 32 0 0 chr5 87305428 87305459 -112324691 + AT_rich Low_complexity Low_complexity 1 31 0 22 56 0 0 chr5 87306042 87306078 -112324072 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 87306199 87306228 -112323922 + AT_rich Low_complexity Low_complexity 1 29 0 515 337 47 0 chr5 87306636 87306826 -112323324 + MIR SINE MIR 30 228 -34 335 300 8 17 chr5 87306844 87306964 -112323186 + CT-rich Low_complexity Low_complexity 3 121 0 1825 86 0 0 chr5 87307253 87307497 -112322653 + L1PA7 LINE L1 5885 6128 -26 240 145 29 29 chr5 87307498 87307567 -112322583 + (TA)n Simple_repeat Simple_repeat 1 69 0 475 117 18 47 chr5 87308965 87309136 -112321014 + (TA)n Simple_repeat Simple_repeat 2 167 0 834 228 102 73 chr5 87309318 87309621 -112320529 - MLT1D LTR MaLR -193 312 1 180 0 0 0 chr5 87309729 87309749 -112320401 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 354 169 0 0 chr5 87310913 87310978 -112319172 + CT-rich Low_complexity Low_complexity 3 67 0 4325 99 21 152 chr5 87311844 87313372 -112316778 - pTR5 LTR ERV1 -1 2605 1523 308 321 0 0 chr5 87314014 87314095 -112316055 + GA-rich Low_complexity Low_complexity 4 84 0 870 191 12 0 chr5 87314262 87314430 -112315720 - L1MC1 LINE L1 -1 6332 6163 1053 289 42 9 chr5 87314436 87314885 -112315265 - L1M4 LINE L1 -2399 3747 3284 2104 187 29 0 chr5 87315819 87316204 -112313946 - MER57A LTR ERV1 0 403 8 4758 55 2 0 chr5 87316566 87317151 -112312999 + LTR10C LTR ERV1 1 586 -5 58 15 0 0 chr5 87317186 87317251 -112312899 + AT_rich Low_complexity Low_complexity 1 65 0 238 302 172 26 chr5 87317620 87317812 -112312338 - HAL1 LINE L1 -1795 712 493 2122 117 3 7 chr5 87318085 87318394 -112311756 + AluSx SINE Alu 1 308 -4 257 120 0 40 chr5 87318535 87318585 -112311565 + FLAM_A SINE Alu 86 133 0 660 251 0 6 chr5 87318602 87318765 -112311385 + AluJo SINE Alu 120 281 -31 22 0 0 0 chr5 87320393 87320415 -112309735 + AT_rich Low_complexity Low_complexity 1 22 0 1205 220 164 7 chr5 87321823 87322128 -112308022 - MLT1A1 LTR MaLR -12 353 1 7411 37 1 0 chr5 87323155 87324756 -112305394 + L1PA4 LINE L1 4550 6151 -4 189 211 0 0 chr5 87324840 87324892 -112305258 + (TTA)n Simple_repeat Simple_repeat 2 53 0 185 265 0 0 chr5 87325138 87325187 -112304963 - L2 LINE L2 0 3313 3265 345 47 0 0 chr5 87325711 87325754 -112304396 + (CA)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr5 87325793 87325814 -112304336 + AT_rich Low_complexity Low_complexity 1 21 0 241 252 279 0 chr5 87327588 87327699 -112302451 + HsTC2 DNA Tc2 2 143 -1755 1047 205 111 52 chr5 87327715 87328120 -112302030 + HsTC2 DNA Tc2 1292 1896 -2 2491 143 24 43 chr5 87329021 87329482 -112300668 + Tigger4(Zombi) DNA MER2_type 2280 2731 0 28 48 0 0 chr5 87329998 87330040 -112300110 + AT_rich Low_complexity Low_complexity 1 42 0 30 0 0 0 chr5 87330334 87330364 -112299786 + AT_rich Low_complexity Low_complexity 1 30 0 1811 169 43 9 chr5 87331436 87331761 -112298389 + MER7A DNA MER2_type 1 334 -12 902 94 87 0 chr5 87332392 87332541 -112297609 + MER30 DNA MER1_type 2 163 -67 2065 117 0 7 chr5 87332551 87332858 -112297292 + L1PA11 LINE L1 5870 6174 0 550 163 0 0 chr5 87332938 87333024 -112297126 + MER30 DNA MER1_type 145 230 0 22 70 0 0 chr5 87333639 87333682 -112296468 + AT_rich Low_complexity Low_complexity 1 43 0 506 286 92 18 chr5 87333768 87333995 -112296155 + MIR SINE MIR 18 261 -1 1691 121 0 0 chr5 87334167 87334399 -112295751 + AluSx SINE Alu 36 267 -45 263 141 16 0 chr5 87334414 87334478 -112295672 + (TA)n Simple_repeat Simple_repeat 1 65 0 446 314 47 50 chr5 87335422 87335680 -112294470 + MIR SINE MIR 6 262 0 689 180 21 58 chr5 87335852 87336041 -112294109 - MER53 DNA DNA -6 183 2 342 183 0 0 chr5 87336273 87336344 -112293806 + (TA)n Simple_repeat Simple_repeat 2 72 0 347 373 111 27 chr5 87338466 87338917 -112291233 - L2 LINE L2 -424 2890 2402 1479 206 30 0 chr5 87339033 87339329 -112290821 - AluJb SINE Alu -7 305 1 1680 155 6 31 chr5 87340016 87340333 -112289817 - AluSq SINE Alu -4 309 1 24 0 0 0 chr5 87340409 87340433 -112289717 + AT_rich Low_complexity Low_complexity 1 24 0 509 293 30 15 chr5 87341236 87341434 -112288716 - L1MEd LINE L1 -5914 205 5 183 329 123 0 chr5 87341707 87341780 -112288370 + L2 LINE L2 3191 3272 0 323 356 11 35 chr5 87342439 87342613 -112287537 + MIR3 SINE MIR 9 178 -30 332 294 20 48 chr5 87343698 87343844 -112286306 - MIR SINE MIR 0 262 121 23 68 0 0 chr5 87344352 87344396 -112285754 + AT_rich Low_complexity Low_complexity 1 44 0 975 152 22 48 chr5 87344576 87344806 -112285344 - L1MA6 LINE L1 0 6300 6077 1989 191 19 35 chr5 87344806 87345235 -112284915 + MSTB LTR MaLR 1 422 -4 1836 173 9 0 chr5 87345240 87345558 -112284592 + MSTB-int LTR MaLR 2 322 -1329 328 155 0 0 chr5 87345558 87345616 -112284534 + MSTB-int LTR MaLR 429 486 -1165 1296 211 23 4 chr5 87345723 87345984 -112284166 + MSTB LTR MaLR 161 426 0 471 179 0 0 chr5 87346151 87346235 -112283915 + MSTB-int LTR MaLR 1318 1401 -250 644 332 84 14 chr5 87346256 87346602 -112283548 + MLT1J2 LTR MaLR 64 433 -17 648 234 127 10 chr5 87346660 87346865 -112283285 - MIR SINE MIR -31 231 3 23 0 0 0 chr5 87348408 87348431 -112281719 + AT_rich Low_complexity Low_complexity 1 23 0 2176 124 0 0 chr5 87349622 87349921 -112280229 - AluSq SINE Alu -14 299 1 6643 148 45 57 chr5 87350099 87350879 -112279271 - L1MA3 LINE L1 -120 7604 6816 2205 83 0 0 chr5 87350879 87351168 -112278982 - AluY SINE Alu -22 289 1 6643 148 45 57 chr5 87351168 87351306 -112278844 - L1MA3 LINE L1 -908 6816 6678 2214 97 17 26 chr5 87351306 87351656 -112278494 - L1PA13 LINE L1 -3 6160 5814 6643 148 45 57 chr5 87351656 87353287 -112276863 - L1MA3 LINE L1 -1046 6678 4246 3793 184 13 16 chr5 87353289 87353980 -112276170 - L1MA3 LINE L1 -6864 701 13 369 0 0 0 chr5 87354208 87354249 -112275901 + (TG)n Simple_repeat Simple_repeat 2 42 0 375 295 62 0 chr5 87355114 87355226 -112274924 + MIR SINE MIR 13 131 -131 261 0 0 0 chr5 87355344 87355373 -112274777 + (TTA)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr5 87355535 87355556 -112274594 + AT_rich Low_complexity Low_complexity 1 21 0 2144 112 0 0 chr5 87355844 87356129 -112274021 - AluSx SINE Alu -18 294 10 22 0 0 0 chr5 87356304 87356326 -112273824 + AT_rich Low_complexity Low_complexity 1 22 0 673 292 10 10 chr5 87356399 87356608 -112273542 - MER63A DNA MER1_type 0 210 2 230 279 31 70 chr5 87356652 87356850 -112273300 + L1MC/D LINE L1 5561 5750 -609 180 250 0 0 chr5 87357126 87357174 -112272976 + (CATATA)n Simple_repeat Simple_repeat 2 49 0 295 255 21 28 chr5 87357184 87357325 -112272825 + (TA)n Simple_repeat Simple_repeat 1 140 0 382 301 118 28 chr5 87357706 87357995 -112272155 + L1ME4a LINE L1 5535 5849 -272 428 303 96 46 chr5 87358054 87358377 -112271773 + L2 LINE L2 2375 2713 -601 394 382 24 76 chr5 87358484 87358772 -112271378 + L2 LINE L2 2979 3251 -21 424 363 63 8 chr5 87358979 87359216 -112270934 - MIR SINE MIR -11 251 2 21 0 0 0 chr5 87359675 87359696 -112270454 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 87360582 87360611 -112269539 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr5 87360769 87360807 -112269343 + AT_rich Low_complexity Low_complexity 1 38 0 1561 211 46 55 chr5 87361114 87361648 -112268502 - MER67C LTR ERV1 -8 506 18 1109 124 20 15 chr5 87362070 87362271 -112267879 - L1MA5A LINE L1 -1 6296 6095 27 0 0 0 chr5 87362807 87362834 -112267316 + AT_rich Low_complexity Low_complexity 1 27 0 274 338 123 15 chr5 87363116 87363320 -112266830 + MIR SINE MIR 37 262 0 27 0 0 0 chr5 87364038 87364065 -112266085 + AT_rich Low_complexity Low_complexity 1 27 0 18187 173 36 31 chr5 87364651 87366760 -112263390 - L1MA2 LINE L1 0 7723 5626 2160 83 0 7 chr5 87366760 87367036 -112263114 - AluY SINE Alu -37 274 1 18187 173 36 31 chr5 87367036 87370844 -112259306 - L1MA2 LINE L1 -2097 5626 1748 207 0 0 0 chr5 87370844 87370867 -112259283 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 18187 173 36 31 chr5 87370867 87372613 -112257537 - L1MA2 LINE L1 -5975 1748 12 2400 116 28 3 chr5 87373053 87373406 -112256744 - THE1B LTR MaLR -2 362 1 332 333 66 53 chr5 87374351 87375035 -112255115 + L1M4 LINE L1 3720 4412 -1734 572 144 126 36 chr5 87376396 87376507 -112253643 + FLAM_C SINE Alu 11 131 -12 282 141 14 70 chr5 87376777 87376848 -112253302 - L1PA16 LINE L1 0 6166 6100 3786 180 47 22 chr5 87376851 87377884 -112252266 - L1PA16 LINE L1 -105 6061 5002 3004 208 12 10 chr5 87377884 87378568 -112251582 + L1PA16 LINE L1 4313 4997 -1149 429 298 25 6 chr5 87378809 87378967 -112251183 - MIR SINE MIR -36 226 66 515 368 12 0 chr5 87379476 87379639 -112250511 - L3 LINE CR1 -10 1567 1403 638 73 10 83 chr5 87380077 87380269 -112249881 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 348 163 0 193 chr5 87380346 87380481 -112249669 - L1MB4 LINE L1 -2 6178 6070 190 387 0 24 chr5 87380831 87380955 -112249195 + L2 LINE L2 3193 3313 0 864 373 29 5 chr5 87381388 87381763 -112248387 + LTR16C LTR ERVL 97 480 -11 2329 265 73 9 chr5 87381910 87383222 -112246928 + L1MC3 LINE L1 655 2243 -4502 845 207 144 3 chr5 87383220 87383519 -112246631 + L1MC3 LINE L1 2197 2537 -4027 * 348 24 0 0 chr5 87383522 87383563 -112246587 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 5580 146 27 2 chr5 87383563 87384725 -112245425 - L1PB2 LINE L1 -11 6140 4954 1795 222 3 0 chr5 87384719 87385097 -112245053 + L1 LINE L1 3931 4309 -1837 * 252 0 0 0 chr5 87385185 87385213 -112244937 + (TG)n Simple_repeat Simple_repeat 2 29 0 230 290 0 0 chr5 87385213 87385275 -112244875 + (CATA)n Simple_repeat Simple_repeat 2 63 0 2231 88 0 25 chr5 87385638 87385957 -112244193 - AluY SINE Alu 0 311 1 1411 211 3 6 chr5 87386264 87386586 -112243564 + L1 LINE L1 4446 4766 -1380 * 5968 251 63 26 chr5 87386580 87389981 -112240169 + L1MC3 LINE L1 3034 5821 -743 329 175 0 0 chr5 87389988 87390051 -112240099 + L1MC3 LINE L1 7582 7644 -559 1402 224 86 2 chr5 87390056 87390090 -112240060 + L1MC3 LINE L1 7758 7788 -415 378 0 0 0 chr5 87390090 87390132 -112240018 + (CA)n Simple_repeat Simple_repeat 1 42 0 1402 224 86 2 chr5 87390132 87390494 -112239656 + L1MC3 LINE L1 7788 8187 -16 21 36 0 0 chr5 87390575 87390603 -112239547 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 87390657 87390686 -112239464 + AT_rich Low_complexity Low_complexity 1 29 0 699 265 6 12 chr5 87391051 87391217 -112238933 - MLT1C LTR MaLR 0 467 303 422 215 0 0 chr5 87391285 87391364 -112238786 - L1MC2 LINE L1 -348 5996 5918 764 169 60 132 chr5 87391368 87391634 -112238516 - MLT1C LTR MaLR -220 247 1 308 241 35 7 chr5 87391737 87391878 -112238272 + (TA)n Simple_repeat Simple_repeat 2 146 0 1811 238 17 4 chr5 87392335 87392806 -112237344 - L1 LINE L1 -2442 3704 3228 1299 196 7 0 chr5 87392800 87393075 -112237075 + L1 LINE L1 3706 3982 -2164 * 6034 123 8 8 chr5 87393066 87394631 -112235519 + L1PA13 LINE L1 4451 6163 0 5471 202 22 9 chr5 87394635 87395836 -112234314 + L1PA16 LINE L1 3984 5167 -999 2385 119 14 27 chr5 87395836 87396205 -112233945 + THE1B LTR MaLR 1 364 0 9367 127 69 1 chr5 87396205 87397685 -112232465 + THE1B-int LTR MaLR 1 1580 0 2487 111 11 0 chr5 87397686 87398045 -112232105 + THE1B LTR MaLR 2 364 0 5471 202 22 9 chr5 87398045 87398995 -112231155 + L1PA16 LINE L1 5166 6166 0 420 310 57 48 chr5 87399428 87399657 -112230493 + L1ME4a LINE L1 5721 5951 -170 28 48 0 0 chr5 87399760 87399802 -112230348 + AT_rich Low_complexity Low_complexity 1 42 0 1602 213 46 3 chr5 87399814 87400138 -112230012 - MER2 DNA MER2_type -7 338 1 25 51 0 0 chr5 87400990 87401029 -112229121 + AT_rich Low_complexity Low_complexity 1 39 0 28 48 0 0 chr5 87401123 87401165 -112228985 + AT_rich Low_complexity Low_complexity 1 42 0 595 251 131 11 chr5 87401274 87401465 -112228685 - MER20 DNA MER1_type -5 214 1 226 247 236 0 chr5 87401526 87401615 -112228535 + MIR SINE MIR 153 262 0 195 214 0 0 chr5 87401650 87401692 -112228458 + MIR3 SINE MIR 160 201 -7 28 29 0 0 chr5 87401997 87402032 -112228118 + AT_rich Low_complexity Low_complexity 1 35 0 693 330 90 63 chr5 87402129 87402965 -112227185 - HERV16 LTR ERVL -1964 3032 2234 2010 200 77 56 chr5 87403066 87403502 -112226648 + MLT2B2 LTR ERVL 26 474 -41 288 91 0 0 chr5 87403502 87403546 -112226604 + (TG)n Simple_repeat Simple_repeat 1 44 0 2010 200 77 56 chr5 87403546 87403589 -112226561 + MLT2B2 LTR ERVL 474 515 0 312 298 41 16 chr5 87403600 87403721 -112226429 - HERV16 LTR ERVL -3264 2221 2098 305 366 118 24 chr5 87403758 87404089 -112226061 - HERV16 LTR ERVL -2944 2052 1691 257 422 23 7 chr5 87404121 87404427 -112225723 - HERV16 LTR ERVL -4122 1642 1332 265 312 13 0 chr5 87405083 87405160 -112224990 + LTR16C LTR ERVL 317 394 -97 232 97 0 0 chr5 87405544 87405575 -112224575 - MLT2B1 LTR ERVL 0 520 490 363 78 0 0 chr5 87405575 87405626 -112224524 + (CA)n Simple_repeat Simple_repeat 2 52 0 180 82 41 20 chr5 87405707 87405756 -112224394 + (TATAA)n Simple_repeat Simple_repeat 5 54 0 1182 240 4 4 chr5 87405838 87406063 -112224087 - MER8 DNA MER2_type -13 226 2 * 1768 233 66 22 chr5 87406063 87406517 -112223633 - MLT2B1 LTR ERVL -46 474 1 285 266 31 0 chr5 87406571 87406635 -112223515 - HERV16 LTR ERVL -4930 66 1 582 352 46 36 chr5 87406682 87407120 -112223030 - LTR16C LTR ERVL -49 442 1 23 33 0 0 chr5 87407179 87407209 -112222941 + AT_rich Low_complexity Low_complexity 1 30 0 922 126 0 0 chr5 87408287 87408437 -112221713 + AluSg/x SINE Alu 158 307 0 1376 150 0 0 chr5 87408818 87409044 -112221106 + Tigger4(Zombi) DNA MER2_type 2506 2731 0 23 0 0 0 chr5 87409879 87409902 -112220248 + AT_rich Low_complexity Low_complexity 1 23 0 411 349 59 47 chr5 87409925 87410263 -112219887 + L2 LINE L2 2882 3223 -90 2177 190 20 78 chr5 87410496 87411101 -112219049 + MER101B LTR ERV1 1 570 0 213 39 0 0 chr5 87411176 87411202 -112218948 + (T)n Simple_repeat Simple_repeat 1 26 0 1520 171 67 23 chr5 87412883 87413229 -112216921 + MER46B DNA MER2_type 1 236 0 24 32 0 0 chr5 87416156 87416187 -112213963 + AT_rich Low_complexity Low_complexity 1 31 0 302 373 92 15 chr5 87416463 87416801 -112213349 + L1ME LINE L1 141 504 -5701 2184 184 35 16 chr5 87416809 87417239 -112212911 - MER101B LTR ERV1 0 570 133 1120 216 35 28 chr5 87417249 87417504 -112212646 - AluJo SINE Alu -53 259 3 734 178 7 7 chr5 87417510 87417645 -112212505 - MER101B LTR ERV1 -435 135 1 963 76 0 15 chr5 87417687 87417818 -112212332 - AluSg/x SINE Alu -13 299 171 389 299 47 33 chr5 87418236 87418447 -112211703 + L1ME LINE L1 1311 1524 -4872 569 318 90 41 chr5 87418463 87419221 -112210929 + L1ME LINE L1 1574 2368 -4028 9628 174 16 13 chr5 87419252 87421121 -112209029 + L1PA13 LINE L1 3117 4990 -1156 5346 125 19 14 chr5 87421131 87421600 -112208550 + L1PA13 LINE L1 5266 5731 -432 2118 166 28 14 chr5 87421600 87421956 -112208194 + THE1B LTR MaLR 4 364 0 11021 102 18 1 chr5 87421956 87423510 -112206640 + THE1B-int LTR MaLR 1 1580 0 2129 146 39 17 chr5 87423510 87423866 -112206284 + THE1B LTR MaLR 1 364 0 5346 125 19 14 chr5 87423866 87424283 -112205867 + L1PA13 LINE L1 5730 6160 -3 237 65 0 0 chr5 87424495 87424526 -112205624 + (GA)n Simple_repeat Simple_repeat 2 32 0 558 316 24 24 chr5 87425259 87425465 -112204685 + MLT1I LTR MaLR 63 268 -141 348 271 102 80 chr5 87425599 87425976 -112204174 + L1ME LINE L1 5315 5701 -420 341 136 17 0 chr5 87426243 87426302 -112203848 + MSTA LTR MaLR 1 60 -368 6335 235 29 56 chr5 87426467 87428546 -112201604 + L1 LINE L1 3287 5309 -837 764 119 9 0 chr5 87428655 87428764 -112201386 + MSTA LTR MaLR 319 428 0 325 309 81 0 chr5 87429566 87429689 -112200461 + MER94 DNA DNA 2 134 0 1144 206 114 36 chr5 87430022 87430382 -112199768 + MLT1B LTR MaLR 1 388 -2 600 241 16 73 chr5 87430428 87430619 -112199531 + MLT1A1 LTR MaLR 1 180 -185 281 217 15 1 chr5 87430713 87430787 -112199363 + MSTD LTR MaLR 328 394 -2 536 259 16 65 chr5 87430814 87430999 -112199151 - MLT1I LTR MaLR -203 206 31 600 138 9 37 chr5 87431472 87431581 -112198569 + 7SLRNA srpRNA srpRNA 213 318 -2 203 261 0 0 chr5 87431582 87431628 -112198522 + A-rich Low_complexity Low_complexity 5 50 0 423 0 0 0 chr5 87432037 87432084 -112198066 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2187 108 0 3 chr5 87432193 87432499 -112197651 + AluSx SINE Alu 1 305 -7 23 0 0 0 chr5 87433574 87433597 -112196553 + AT_rich Low_complexity Low_complexity 1 23 0 41 0 0 0 chr5 87433615 87433656 -112196494 + AT_rich Low_complexity Low_complexity 1 41 0 21 36 0 0 chr5 87434307 87434335 -112195815 + AT_rich Low_complexity Low_complexity 1 28 0 565 297 7 0 chr5 87434565 87434720 -112195430 + MER63A DNA MER1_type 53 208 -2 1742 254 99 45 chr5 87435047 87436431 -112193719 - L1ME2 LINE L1 -16 6217 4750 1105 276 84 61 chr5 87436453 87437628 -112192522 - L1ME2 LINE L1 -2697 3518 2317 28 91 0 0 chr5 87437685 87437762 -112192388 + AT_rich Low_complexity Low_complexity 1 77 0 616 285 85 32 chr5 87437770 87438446 -112191704 - L1ME2 LINE L1 -4986 1219 629 1742 162 69 11 chr5 87438562 87438925 -112191225 - L1PB1 LINE L1 -3 6148 5759 224 111 78 33 chr5 87438930 87439020 -112191130 + (TTATA)n Simple_repeat Simple_repeat 4 97 0 285 29 0 0 chr5 87439060 87439094 -112191056 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 3458 113 17 11 chr5 87439095 87439711 -112190439 - L1PB1 LINE L1 -371 5780 5162 2517 210 23 5 chr5 87439681 87440286 -112189864 + L1MA4 LINE L1 4090 4705 -1441 * 605 277 93 18 chr5 87440692 87440970 -112189180 - LTR43 LTR ERV1 -124 478 180 483 393 71 20 chr5 87441901 87442511 -112187639 + L2 LINE L2 2399 3041 -231 3298 209 28 11 chr5 87443196 87444432 -112185718 + L1MA4 LINE L1 4770 6026 -274 2195 107 0 7 chr5 87444434 87444743 -112185407 + AluSx SINE Alu 1 307 -5 869 212 0 12 chr5 87445466 87445636 -112184514 - FRAM SINE Alu -8 168 1 550 254 123 11 chr5 87447385 87447669 -112182481 + L1ME3A LINE L1 2247 2562 -3584 2795 16 0 0 chr5 87447717 87448030 -112182120 + AluYb8 SINE Alu 1 313 -5 23 0 0 0 chr5 87448104 87448127 -112182023 + AT_rich Low_complexity Low_complexity 1 23 0 720 299 80 20 chr5 87448297 87448957 -112181193 + L1ME3A LINE L1 2931 3630 -2516 2440 54 0 19 chr5 87448957 87449270 -112180880 - AluY SINE Alu -4 307 1 287 304 103 41 chr5 87449420 87449844 -112180306 + MLT1G1 LTR MaLR 64 595 0 1027 266 105 36 chr5 87449906 87450372 -112179778 + L1ME3A LINE L1 5673 6170 0 390 346 78 8 chr5 87450387 87450644 -112179506 + L1ME3A LINE L1 4677 4951 -1195 360 339 74 35 chr5 87450654 87450884 -112179266 + L1ME3A LINE L1 5810 6048 -122 28 48 0 0 chr5 87451948 87451990 -112178160 + AT_rich Low_complexity Low_complexity 1 42 0 4634 126 31 0 chr5 87452269 87453007 -112177143 + L1PA15 LINE L1 5400 6160 -5 27 0 0 0 chr5 87453247 87453274 -112176876 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr5 87454095 87454117 -112176033 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 261 57 0 0 chr5 87456325 87456360 -112173790 + (TG)n Simple_repeat Simple_repeat 1 35 0 29 28 0 0 chr5 87457091 87457127 -112173023 + AT_rich Low_complexity Low_complexity 1 36 0 514 300 64 27 chr5 87457131 87457351 -112172799 - MIR SINE MIR -26 236 9 198 333 121 0 chr5 87457358 87457424 -112172726 - L2 LINE L2 -61 3211 3138 26 0 0 0 chr5 87457834 87457860 -112172290 + AT_rich Low_complexity Low_complexity 1 26 0 887 51 8 0 chr5 87458300 87458418 -112171732 - L1PA4 LINE L1 -3 6152 6034 21 57 0 0 chr5 87459333 87459368 -112170782 + AT_rich Low_complexity Low_complexity 1 35 0 239 288 34 0 chr5 87459683 87459742 -112170408 - MIR3 SINE MIR -43 165 105 29 0 0 0 chr5 87461911 87461940 -112168210 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 87462533 87462561 -112167589 + AT_rich Low_complexity Low_complexity 1 28 0 210 330 93 0 chr5 87464277 87464395 -112165755 + L2 LINE L2 3120 3248 -65 29 0 0 0 chr5 87464438 87464467 -112165683 + AT_rich Low_complexity Low_complexity 1 29 0 1948 162 0 0 chr5 87465274 87465582 -112164568 - AluSx SINE Alu -4 308 1 1601 169 3 24 chr5 87465796 87466150 -112164000 - AluJo SINE Alu 0 348 1 387 0 0 0 chr5 87466297 87466340 -112163810 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 247 200 31 15 chr5 87467092 87467157 -112162993 + MLT1L LTR MaLR 545 610 -5 21 0 0 0 chr5 87467359 87467380 -112162770 + AT_rich Low_complexity Low_complexity 1 21 0 1785 282 74 29 chr5 87467566 87468574 -112161576 + L1MEc LINE L1 742 1818 -4578 216 0 0 0 chr5 87468574 87468598 -112161552 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1785 282 74 29 chr5 87468598 87468839 -112161311 + L1MEc LINE L1 1818 2047 -4349 1038 457 3 0 chr5 87468839 87469139 -112161011 + AluJb SINE Alu 2 302 0 816 311 72 27 chr5 87470234 87470678 -112159472 + LTR16B LTR ERVL 1 464 0 540 294 38 42 chr5 87472019 87472284 -112157866 + Charlie8 DNA MER1_type 3 266 -2151 2119 132 7 0 chr5 87472445 87472755 -112157395 - AluSq SINE Alu -1 312 1 1585 169 4 18 chr5 87473219 87473492 -112156658 + AluJb SINE Alu 4 272 -40 2084 183 27 19 chr5 87473568 87473978 -112156172 - MSTB LTR MaLR -13 413 1 195 212 192 40 chr5 87474067 87474166 -112155984 - MIR SINE MIR -50 212 99 543 238 221 0 chr5 87474181 87474353 -112155797 - MLT1J1 LTR MaLR -236 210 1 21 0 0 0 chr5 87475803 87475824 -112154326 + AT_rich Low_complexity Low_complexity 1 21 0 222 35 0 0 chr5 87477239 87477249 -112152901 + (GA)n Simple_repeat Simple_repeat 2 11 -19 1933 93 10 31 chr5 87477249 87477377 -112152773 + AluSc SINE Alu 1 130 -179 1677 92 0 13 chr5 87477377 87477665 -112152485 + AluY SINE Alu 77 311 0 1933 93 10 31 chr5 87477665 87477827 -112152323 + AluSc SINE Alu 130 285 -24 222 35 0 0 chr5 87477827 87477845 -112152305 + (GA)n Simple_repeat Simple_repeat 10 30 0 371 260 0 29 chr5 87477847 87477939 -112152211 + GA-rich Low_complexity Low_complexity 1 94 -317 1460 116 151 8 chr5 87477939 87478190 -112151960 + AluSg1 SINE Alu 6 292 -17 371 260 0 29 chr5 87478190 87478271 -112151879 + GA-rich Low_complexity Low_complexity 94 411 0 742 134 0 43 chr5 87478273 87478460 -112151690 + (GGGA)n Simple_repeat Simple_repeat 1 179 0 307 238 0 33 chr5 87478481 87478603 -112151547 + GA-rich Low_complexity Low_complexity 3 120 0 201 322 74 41 chr5 87478805 87478926 -112151224 + L2 LINE L2 3184 3308 -5 1854 188 31 121 chr5 87479082 87479741 -112150409 - LTR9 LTR ERV1 0 612 18 260 328 8 15 chr5 87479990 87480121 -112150029 - L1MEc LINE L1 -3594 2621 2492 1664 208 22 19 chr5 87480147 87480508 -112149642 - MLT1A1 LTR MaLR 0 365 4 739 277 43 12 chr5 87480510 87480763 -112149387 - LTR33A LTR ERVL -6 517 257 328 250 129 89 chr5 87481034 87481097 -112149053 - L1MEc LINE L1 -3962 2434 2375 2433 65 0 7 chr5 87481097 87481407 -112148743 - AluY SINE Alu -3 308 1 328 250 129 89 chr5 87481407 87481623 -112148527 - L1MEc LINE L1 -4021 2375 2144 27 29 0 0 chr5 87481813 87481847 -112148303 + AT_rich Low_complexity Low_complexity 1 34 0 32 101 0 0 chr5 87482027 87482136 -112148014 + AT_rich Low_complexity Low_complexity 1 109 0 396 179 104 19 chr5 87482842 87482948 -112147202 + L1PB4 LINE L1 2938 3052 -3094 7372 128 41 14 chr5 87483050 87485670 -112144480 + L1PA4 LINE L1 3465 6154 -1 2949 191 62 10 chr5 87485675 87486943 -112143207 + L1PB4 LINE L1 4474 5791 -365 258 287 11 0 chr5 87486922 87487016 -112143134 - L1MC4 LINE L1 -1334 6708 6614 * 239 89 0 0 chr5 87487038 87487083 -112143067 - L1M2 LINE L1 -502 5789 5745 218 189 0 0 chr5 87487083 87487120 -112143030 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 1386 182 28 32 chr5 87487149 87487492 -112142658 + L1PB4 LINE L1 5767 6121 -34 347 220 11 0 chr5 87487492 87487583 -112142567 + (TA)n Simple_repeat Simple_repeat 1 92 0 500 176 98 0 chr5 87487591 87487693 -112142457 - L1M2 LINE L1 -521 5791 5680 * 1972 252 81 37 chr5 87487689 87488819 -112141331 + L1M4 LINE L1 2235 3367 -2848 798 261 91 49 chr5 87488826 87489477 -112140673 + L1ME2 LINE L1 2463 3140 -3006 * 1248 275 43 15 chr5 87489458 87489924 -112140226 + L1ME2 LINE L1 5677 6155 -9 1027 222 23 119 chr5 87490112 87490508 -112139642 - MLT1A1 LTR MaLR -6 359 2 22 0 0 0 chr5 87490566 87490588 -112139562 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 87490914 87490942 -112139208 + AT_rich Low_complexity Low_complexity 1 28 0 4721 162 52 28 chr5 87491190 87492340 -112137810 - L1MA6 LINE L1 -1 6299 5130 3524 207 35 7 chr5 87492334 87493155 -112136995 + L1M4 LINE L1 4318 5161 -1054 * 1169 164 23 27 chr5 87495584 87495846 -112134304 - L1MA6 LINE L1 -3 6297 6037 23 0 0 0 chr5 87495877 87495900 -112134250 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr5 87496189 87496224 -112133926 + AT_rich Low_complexity Low_complexity 1 35 0 2106 104 0 41 chr5 87496583 87496899 -112133251 - AluSq SINE Alu -9 304 2 574 231 75 0 chr5 87497265 87497425 -112132725 + L1M4 LINE L1 5478 5649 -604 1719 135 0 15 chr5 87498099 87498366 -112131784 - AluSq SINE Alu -15 298 36 22 0 0 0 chr5 87498451 87498473 -112131677 + AT_rich Low_complexity Low_complexity 1 22 0 5275 196 188 21 chr5 87498620 87499893 -112130257 + MER52A LTR ERV1 271 1755 0 1658 181 35 0 chr5 87499893 87500168 -112129982 + MER1B DNA MER1_type 55 339 0 458 221 15 133 chr5 87500178 87500373 -112129777 - L1ME2 LINE L1 -285 5879 5708 609 187 13 13 chr5 87500837 87500992 -112129158 + CT-rich Low_complexity Low_complexity 2 156 0 311 254 0 0 chr5 87501239 87501302 -112128848 + MIR SINE MIR 83 145 -63 256 219 0 0 chr5 87502461 87502525 -112127625 + L1MC4 LINE L1 6640 6703 -1339 2446 249 60 52 chr5 87502537 87503369 -112126781 - L1ME2 LINE L1 -581 5585 4738 2053 120 0 20 chr5 87503369 87503669 -112126481 - AluSg SINE Alu -16 294 1 2446 249 60 52 chr5 87503669 87504377 -112125773 - L1ME2 LINE L1 -1428 4738 4037 2991 187 72 0 chr5 87504383 87504940 -112125210 + LTR31 LTR ERV1 8 604 -15 276 253 30 84 chr5 87504946 87505112 -112125038 - L1ME2 LINE L1 -2116 4030 3874 1954 141 17 0 chr5 87505325 87505615 -112124535 + AluSq SINE Alu 1 295 -18 23 0 0 0 chr5 87505720 87505743 -112124407 + AT_rich Low_complexity Low_complexity 1 23 0 1955 152 0 0 chr5 87506366 87506655 -112123495 - AluSx SINE Alu -19 293 5 24 0 0 0 chr5 87506687 87506711 -112123439 + AT_rich Low_complexity Low_complexity 1 24 0 303 299 60 24 chr5 87506909 87507076 -112123074 - L1M4 LINE L1 -805 5341 5169 25 31 0 0 chr5 87507655 87507687 -112122463 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr5 87507887 87507915 -112122235 + AT_rich Low_complexity Low_complexity 1 28 0 3548 227 42 21 chr5 87507918 87509211 -112120939 - L1MB7 LINE L1 -13 6171 4856 279 0 0 0 chr5 87509216 87509247 -112120903 + (TG)n Simple_repeat Simple_repeat 2 32 0 30 45 0 0 chr5 87509247 87509291 -112120859 + AT_rich Low_complexity Low_complexity 1 44 0 229 261 0 0 chr5 87510908 87510954 -112119196 + (TG)n Simple_repeat Simple_repeat 2 47 0 2457 120 11 8 chr5 87511013 87511387 -112118763 + THE1C LTR MaLR 1 375 0 2563 267 83 15 chr5 87511440 87512223 -112117927 - MER21B LTR ERV1 -9 854 19 380 272 0 22 chr5 87512245 87512337 -112117813 - MER21B LTR ERV1 -773 90 1 217 232 71 0 chr5 87514638 87514694 -112115456 - L2 LINE L2 -4 3268 3209 280 231 137 143 chr5 87515095 87515212 -112114938 - MER5A DNA MER1_type 0 189 72 2165 117 0 3 chr5 87515212 87515510 -112114640 - AluSx SINE Alu -13 299 3 280 231 137 143 chr5 87515510 87515574 -112114576 - MER5A DNA MER1_type -117 72 9 192 125 0 0 chr5 87515744 87515776 -112114374 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 1935 187 52 48 chr5 87516386 87516847 -112113303 + MER66B LTR ERV1 24 486 0 4744 184 32 24 chr5 87516863 87517269 -112112881 + L1MA9 LINE L1 4591 4992 -1320 2674 111 0 5 chr5 87517269 87517646 -112112504 - THE1C LTR MaLR 0 375 1 4744 184 32 24 chr5 87517646 87518947 -112111203 + L1MA9 LINE L1 4992 6312 0 235 329 13 0 chr5 87519192 87519271 -112110879 + L1ME1 LINE L1 4751 4830 -1316 818 172 19 0 chr5 87519393 87519550 -112110600 - L1MA3 LINE L1 -197 6108 5949 * 2770 281 42 24 chr5 87519548 87520733 -112109417 + L1ME1 LINE L1 4964 6331 -3 1171 303 63 18 chr5 87520821 87521451 -112108699 + L1MC4a LINE L1 5287 5945 -1863 1048 268 18 43 chr5 87521481 87521880 -112108270 + L1MA9 LINE L1 5886 6274 -38 361 239 127 35 chr5 87521895 87522092 -112108058 + L1MC4a LINE L1 5974 6188 -1620 227 192 0 0 chr5 87522527 87522579 -112107571 + T-rich Low_complexity Low_complexity 1 52 0 7506 33 0 0 chr5 87522581 87524184 -112105966 - L1PA4 LINE L1 -3 6152 4550 1205 220 164 7 chr5 87525211 87525516 -112104634 + MLT1A1 LTR MaLR 1 353 -12 22 0 0 0 chr5 87526923 87526945 -112103205 + AT_rich Low_complexity Low_complexity 1 22 0 584 241 129 35 chr5 87527671 87527968 -112102182 - MLT1E LTR MaLR -113 480 157 2230 81 0 3 chr5 87527968 87528266 -112101884 - AluY SINE Alu -14 297 1 584 241 129 35 chr5 87528266 87528312 -112101838 - MLT1E LTR MaLR -436 157 117 6758 227 23 26 chr5 87528317 87530192 -112099958 + L1MA9 LINE L1 2315 4184 -1962 30 45 0 0 chr5 87630530 87630574 -111999576 + AT_rich Low_complexity Low_complexity 1 44 0 29 28 0 0 chr5 87630900 87630936 -111999214 + AT_rich Low_complexity Low_complexity 1 36 0 30 27 0 0 chr5 87631908 87631945 -111998205 + AT_rich Low_complexity Low_complexity 1 37 0 3876 223 38 18 chr5 87632550 87633806 -111996344 + L1MA9 LINE L1 4965 6244 -68 498 196 19 9 chr5 87633945 87634052 -111996098 + MLT1B LTR MaLR 283 390 0 350 287 31 63 chr5 87634058 87634281 -111995869 - L1MEc LINE L1 -4023 2373 2158 25 31 0 0 chr5 87634523 87634555 -111995595 + AT_rich Low_complexity Low_complexity 1 32 0 2827 230 161 8 chr5 87635049 87635865 -111994285 - THE1B-int LTR MaLR -693 958 2 1811 165 31 11 chr5 87635867 87636224 -111993926 - THE1B LTR MaLR 0 364 1 629 216 47 7 chr5 87636392 87636540 -111993610 + L1MCa LINE L1 269 422 -6004 204 111 0 0 chr5 87636553 87636589 -111993561 + (A)n Simple_repeat Simple_repeat 1 36 0 1742 218 103 8 chr5 87636612 87637195 -111992955 + L1MC3 LINE L1 7125 7784 -1 26 64 0 0 chr5 87637310 87637357 -111992793 + AT_rich Low_complexity Low_complexity 1 47 0 213 113 19 38 chr5 87638613 87638666 -111991484 + (TA)n Simple_repeat Simple_repeat 2 53 0 872 218 8 21 chr5 87638932 87639171 -111990979 - AluJb SINE Alu -72 240 5 210 37 0 0 chr5 87639398 87639425 -111990725 + (CA)n Simple_repeat Simple_repeat 2 28 0 227 24 0 98 chr5 87639432 87639473 -111990677 + (GA)n Simple_repeat Simple_repeat 2 38 0 1633 165 7 0 chr5 87639473 87639752 -111990398 - AluSp SINE Alu -30 283 3 3725 259 4 12 chr5 87640203 87641350 -111988800 + L1P LINE L1 4210 5347 -799 1353 261 30 87 chr5 87641505 87642409 -111987741 + L1MB7 LINE L1 4315 5175 -971 1533 223 79 13 chr5 87642438 87642819 -111987331 + MLT2D LTR ERVL 9 414 0 582 230 24 49 chr5 87642824 87643079 -111987071 + L1MB7 LINE L1 5175 5427 -753 347 167 15 0 chr5 87643091 87643157 -111986993 + L1MB7 LINE L1 5889 5955 -229 6120 234 19 8 chr5 87643324 87644623 -111985527 + L1PA12 LINE L1 889 2201 -5380 2142 266 28 16 chr5 87644725 87645363 -111984787 - L1M3f LINE L1 -4673 655 10 26 50 0 0 chr5 87645903 87645943 -111984207 + AT_rich Low_complexity Low_complexity 1 40 0 250 284 45 0 chr5 87647213 87647301 -111982849 - MIR SINE MIR -19 243 152 29 0 0 0 chr5 87647481 87647510 -111982640 + AT_rich Low_complexity Low_complexity 1 29 0 1276 218 55 25 chr5 87647563 87647925 -111982225 + Charlie1b DNA MER1_type 151 523 0 230 260 0 0 chr5 87649065 87649115 -111981035 - L1PA12 LINE L1 -7521 60 11 183 184 0 0 chr5 87649707 87649745 -111980405 + (TA)n Simple_repeat Simple_repeat 1 38 0 31 26 0 0 chr5 87650579 87650617 -111979533 + AT_rich Low_complexity Low_complexity 1 38 0 23 78 0 0 chr5 87651613 87651664 -111978486 + AT_rich Low_complexity Low_complexity 1 51 0 315 354 50 11 chr5 87651839 87652020 -111978130 - MIR SINE MIR -1 261 74 22 0 0 0 chr5 87652055 87652077 -111978073 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 87652339 87652360 -111977790 + AT_rich Low_complexity Low_complexity 1 21 0 820 166 73 13 chr5 87652492 87652643 -111977507 - AluJb SINE Alu -22 290 131 36 62 0 0 chr5 87653889 87653953 -111976197 + AT_rich Low_complexity Low_complexity 1 64 0 242 355 58 13 chr5 87654118 87654273 -111975877 - MIR SINE MIR -1 261 100 1720 176 27 52 chr5 87656566 87656970 -111973180 + MSTD LTR MaLR 1 394 -2 24 32 0 0 chr5 87657319 87657350 -111972800 + AT_rich Low_complexity Low_complexity 1 31 0 243 279 15 0 chr5 87657847 87657915 -111972235 + L1M4 LINE L1 2403 2471 -3675 9697 201 35 24 chr5 87657917 87660424 -111969726 + L1PA15 LINE L1 2840 5319 -846 1990 133 0 0 chr5 87660424 87660703 -111969447 + AluSx SINE Alu 1 279 -33 241 80 20 20 chr5 87660704 87660754 -111969396 + (TAAAA)n Simple_repeat Simple_repeat 1 50 0 9697 201 35 24 chr5 87660754 87661388 -111968762 + L1PA15 LINE L1 5319 6018 -147 2117 136 0 3 chr5 87661388 87661698 -111968452 + AluSg SINE Alu 2 310 0 9697 201 35 24 chr5 87661698 87661848 -111968302 + L1PA15 LINE L1 6018 6165 0 396 274 35 17 chr5 87661947 87662177 -111967973 + L1M4 LINE L1 3256 3489 -2657 1866 225 18 12 chr5 87662197 87662597 -111967553 + L1MCa LINE L1 21 422 -6004 2194 194 189 11 chr5 87662613 87663241 -111966909 + L1MC3 LINE L1 7031 7770 -15 767 245 113 9 chr5 87663249 87663567 -111966583 + MER119 DNA MER1_type 232 582 -1 365 238 50 30 chr5 87663595 87663696 -111966454 + Charlie1b DNA MER1_type 1 103 -420 29 0 0 0 chr5 87663716 87663745 -111966405 + AT_rich Low_complexity Low_complexity 1 29 0 1447 214 53 23 chr5 87663767 87664160 -111965990 + Charlie1b DNA MER1_type 119 523 0 255 61 0 0 chr5 87665415 87665448 -111964702 + (TG)n Simple_repeat Simple_repeat 2 34 0 2058 119 3 0 chr5 87665448 87665733 -111964417 - AluSq SINE Alu -27 286 1 188 318 0 0 chr5 87666531 87666575 -111963575 - L2 LINE L2 -17 3255 3212 2058 127 3 16 chr5 87666837 87667152 -111962998 + AluSp SINE Alu 1 311 -2 21 95 0 0 chr5 87668211 87668274 -111961876 + AT_rich Low_complexity Low_complexity 1 63 0 390 84 56 70 chr5 87669695 87669766 -111960384 - MSTA LTR MaLR -2 426 357 991 149 11 28 chr5 87669766 87669947 -111960203 + AluSg/x SINE Alu 133 310 0 522 143 0 0 chr5 87669949 87670040 -111960110 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 189 0 0 0 chr5 87670074 87670095 -111960055 + (GAAAA)n Simple_repeat Simple_repeat 2 22 0 1975 153 42 8 chr5 87670095 87670444 -111959706 - MSTA LTR MaLR -64 364 1 291 73 55 0 chr5 87671787 87671842 -111958308 + (TA)n Simple_repeat Simple_repeat 2 59 0 2107 95 17 20 chr5 87673133 87673427 -111956723 - AluSc SINE Alu -11 298 6 266 196 21 41 chr5 87674851 87674948 -111955202 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 34 79 0 0 chr5 87675150 87675226 -111954924 + AT_rich Low_complexity Low_complexity 1 76 0 198 0 0 0 chr5 87677427 87677449 -111952701 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 2252 153 25 5 chr5 87677491 87677896 -111952254 - L1MA2 LINE L1 0 6304 5892 27 0 0 0 chr5 87678054 87678081 -111952069 + AT_rich Low_complexity Low_complexity 1 27 0 779 306 118 35 chr5 87678233 87678866 -111951284 - L1ME3A LINE L1 -174 6065 5380 234 326 66 38 chr5 87679048 87679336 -111950814 - L1ME3A LINE L1 -1052 5163 4868 3112 291 82 38 chr5 87679682 87682751 -111947399 - L1MEc LINE L1 -1497 4718 1541 401 359 29 47 chr5 87682752 87683028 -111947122 - L1MEc LINE L1 -4910 1307 1037 361 306 111 30 chr5 87683192 87683341 -111946809 - L1MEc LINE L1 -5474 922 752 1785 151 11 0 chr5 87683341 87683612 -111946538 - AluSx SINE Alu -3 309 36 361 306 111 30 chr5 87683612 87683661 -111946489 - L1MEc LINE L1 -5644 752 708 913 180 6 60 chr5 87683686 87683869 -111946281 - AluJo SINE Alu -53 259 87 303 372 105 40 chr5 87684047 87684324 -111945826 - L1MEc LINE L1 -6042 354 60 27 0 0 0 chr5 87684351 87684378 -111945772 + AT_rich Low_complexity Low_complexity 1 27 0 221 356 27 0 chr5 87685036 87685109 -111945041 - MIR SINE MIR -154 108 34 23 86 0 0 chr5 87686415 87686473 -111943677 + AT_rich Low_complexity Low_complexity 1 58 0 420 274 126 91 chr5 87687022 87687252 -111942898 + MIR SINE MIR 5 242 -20 30 0 0 0 chr5 87687291 87687321 -111942829 + AT_rich Low_complexity Low_complexity 1 30 0 2813 3 0 0 chr5 87687450 87687756 -111942394 + AluYa5 SINE Alu 1 306 -5 21 0 0 0 chr5 87690073 87690094 -111940056 + AT_rich Low_complexity Low_complexity 1 21 0 226 315 0 63 chr5 87691520 87691663 -111938487 + MER94 DNA DNA 1 134 0 1810 141 30 30 chr5 87691775 87692074 -111938076 + AluSx SINE Alu 1 299 -13 244 219 16 0 chr5 87692233 87692297 -111937853 - L1ME2 LINE L1 -15 6149 6085 1895 203 45 0 chr5 87692368 87692727 -111937423 + MER52A LTR ERV1 1381 1755 0 2574 138 69 19 chr5 87692727 87693250 -111936900 - Tigger3(Golem) DNA MER2_type -203 2826 2278 525 256 0 45 chr5 87693221 87693262 -111936888 - Tigger3(Golem) DNA MER2_type -1103 128 87 * 2123 67 24 34 chr5 87693262 87693559 -111936591 - AluY SINE Alu -17 294 1 525 256 0 45 chr5 87693559 87693650 -111936500 - Tigger3(Golem) DNA MER2_type -1144 87 2 271 211 0 0 chr5 87694169 87694221 -111935929 - MIR SINE MIR -50 212 161 1795 136 17 3 chr5 87694244 87694531 -111935619 - AluSx SINE Alu -21 291 1 1384 230 7 7 chr5 87694597 87694897 -111935253 + AluJo SINE Alu 6 305 -7 2102 132 0 0 chr5 87694995 87695290 -111934860 + AluSx SINE Alu 1 295 -17 423 321 43 7 chr5 87695640 87695780 -111934370 - MIR SINE MIR -114 148 4 2192 57 0 21 chr5 87696803 87697181 -111932969 - AluY SINE Alu 0 381 10 21 57 0 0 chr5 87697837 87697872 -111932278 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr5 87699067 87699102 -111931048 + AT_rich Low_complexity Low_complexity 1 35 0 2441 51 0 3 chr5 87699187 87699498 -111930652 + AluY SINE Alu 1 310 -1 833 318 52 4 chr5 87700005 87700272 -111929878 - L2 LINE L2 -684 2630 2351 34 0 0 0 chr5 87701061 87701095 -111929055 + AT_rich Low_complexity Low_complexity 1 34 0 22 56 0 0 chr5 87701117 87701153 -111928997 + AT_rich Low_complexity Low_complexity 1 36 0 2331 134 63 5 chr5 87701210 87701620 -111928530 - MER61C LTR ERV1 0 434 1 4166 215 34 13 chr5 87701674 87703140 -111927010 + L1MA9 LINE L1 4779 6274 -38 428 305 111 18 chr5 87703733 87703959 -111926191 - MIR SINE MIR -8 254 8 201 262 131 0 chr5 87704159 87704220 -111925930 + L2 LINE L2 3203 3271 -1 3434 188 29 1 chr5 87704289 87704979 -111925171 - MER67C LTR ERV1 -1 709 1 300 271 35 0 chr5 87705063 87705148 -111925002 + MIR3 SINE MIR 90 177 -31 240 35 0 0 chr5 87705465 87705494 -111924656 + (CA)n Simple_repeat Simple_repeat 2 30 0 192 40 0 0 chr5 87706016 87706041 -111924109 + (TG)n Simple_repeat Simple_repeat 2 26 0 756 236 23 14 chr5 87706655 87706875 -111923275 - L1MB4 LINE L1 -1 6179 5958 390 121 15 0 chr5 87706914 87706980 -111923170 - L1MB4 LINE L1 -229 5955 5889 727 178 31 58 chr5 87706992 87707247 -111922903 - L1MB4 LINE L1 -753 5427 5175 1755 212 79 5 chr5 87707252 87707630 -111922520 - MLT2D LTR ERVL 0 414 9 2051 228 38 81 chr5 87707673 87708559 -111921591 - L1MB4 LINE L1 -984 5162 4315 191 421 28 0 chr5 87708632 87708739 -111921411 + L3 LINE CR1 1437 1546 -31 198 0 0 0 chr5 87708950 87708972 -111921178 + (TG)n Simple_repeat Simple_repeat 1 22 0 195 42 0 0 chr5 87708971 87708995 -111921155 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 271 292 144 58 chr5 87709563 87709820 -111920330 + LTR33 LTR ERVL 9 287 -234 261 336 23 0 chr5 87710888 87711019 -111919131 - MER94 DNA DNA 0 134 1 249 280 120 0 chr5 87711081 87711181 -111918969 - MER53 DNA DNA -75 114 3 21 0 0 0 chr5 87711306 87711327 -111918823 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr5 87711368 87711408 -111918742 + AT_rich Low_complexity Low_complexity 1 40 0 2030 109 3 24 chr5 87711408 87711702 -111918448 - AluSx SINE Alu -24 288 1 21 0 0 0 chr5 87712471 87712492 -111917658 + AT_rich Low_complexity Low_complexity 1 21 0 3798 147 13 2 chr5 87712546 87713164 -111916986 - L1PA13 LINE L1 -3 6160 5536 1864 171 7 0 chr5 87713788 87714098 -111916052 - AluSx SINE Alu 0 312 1 1322 227 44 27 chr5 87714289 87714655 -111915495 + MLT2D LTR ERVL 1 520 -34 24 0 0 0 chr5 87716423 87716447 -111913703 + AT_rich Low_complexity Low_complexity 1 24 0 1908 124 7 0 chr5 87716794 87717077 -111913073 + AluSg SINE Alu 24 308 -2 581 230 136 19 chr5 87718226 87718439 -111911711 + MIR SINE MIR 1 238 -24 181 349 0 0 chr5 87718406 87718469 -111911681 + L2 LINE L2 3251 3313 0 * 22 56 0 0 chr5 87720439 87720475 -111909675 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 87720660 87720683 -111909467 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr5 87721627 87721665 -111908485 + AT_rich Low_complexity Low_complexity 1 38 0 182 382 75 54 chr5 87721887 87722128 -111908022 - L2 LINE L2 -21 3251 3006 24 53 0 0 chr5 87722992 87723030 -111907120 + AT_rich Low_complexity Low_complexity 1 38 0 2180 146 22 0 chr5 87724437 87724793 -111905357 + THE1B LTR MaLR 1 364 0 4117 212 152 4 chr5 87724795 87725759 -111904391 + THE1B-int LTR MaLR 3 1108 -543 964 211 10 10 chr5 87725760 87725954 -111904196 + AluJb SINE Alu 92 285 -27 370 109 0 0 chr5 87726104 87726159 -111903991 - L1MC3 LINE L1 -1225 6560 6506 3729 203 129 2 chr5 87726214 87726331 -111903819 + L1MC3 LINE L1 6724 6825 -960 279 0 0 0 chr5 87726331 87726362 -111903788 + (CA)n Simple_repeat Simple_repeat 2 32 0 3729 203 129 2 chr5 87726362 87727179 -111902971 + L1MC3 LINE L1 6825 7777 -8 1815 253 38 26 chr5 87727197 87727699 -111902451 + LTR53 LTR ERVL 1 508 -11 478 339 73 34 chr5 87728596 87728802 -111901348 + L2 LINE L2 917 1144 -2170 2236 104 3 40 chr5 87728802 87729178 -111900972 + THE1B LTR MaLR 3 364 0 478 339 73 34 chr5 87729178 87729325 -111900825 + L2 LINE L2 1144 1284 -2030 315 224 0 0 chr5 87729346 87729404 -111900746 - MLT1I LTR MaLR -2 407 350 183 80 0 0 chr5 87729413 87729438 -111900712 + (CAAAAA)n Simple_repeat Simple_repeat 3 27 0 510 213 142 7 chr5 87729731 87729886 -111900264 - MER53 DNA DNA -13 176 1 213 94 0 0 chr5 87730444 87730476 -111899674 + (T)n Simple_repeat Simple_repeat 1 32 0 188 313 73 52 chr5 87730537 87730633 -111899517 + L2 LINE L2 3173 3270 -2 1046 165 15 5 chr5 87731925 87732125 -111898025 - L1PA15 LINE L1 0 6165 5964 2098 103 7 0 chr5 87733276 87733557 -111896593 + AluSp SINE Alu 1 283 -30 372 59 0 0 chr5 87733557 87733608 -111896542 + (TC)n Simple_repeat Simple_repeat 2 52 0 214 231 0 0 chr5 87733609 87733648 -111896502 + (TG)n Simple_repeat Simple_repeat 2 40 0 187 152 0 0 chr5 87733675 87733708 -111896442 - MIR SINE MIR -10 252 220 221 393 28 9 chr5 87733747 87733854 -111896296 - MIR SINE MIR -137 125 17 1828 159 10 3 chr5 87733861 87734163 -111895987 + AluSx SINE Alu 1 304 -8 963 76 8 0 chr5 87735530 87735661 -111894489 + L1MA1 LINE L1 5863 5994 -308 1534 138 131 4 chr5 87735856 87736116 -111894034 - AluSx SINE Alu -8 294 2 31 0 0 0 chr5 87736164 87736195 -111893955 + AT_rich Low_complexity Low_complexity 1 31 0 277 342 27 34 chr5 87736434 87736583 -111893567 + L1MC/D LINE L1 5444 5591 -2217 23 54 0 0 chr5 87736752 87736789 -111893361 + AT_rich Low_complexity Low_complexity 1 37 0 29 0 0 0 chr5 87737481 87737510 -111892640 + AT_rich Low_complexity Low_complexity 1 29 0 1534 138 131 4 chr5 87737557 87737817 -111892333 + AluSx SINE Alu 2 294 -8 407 314 101 21 chr5 87739184 87739471 -111890679 + L2 LINE L2 1740 2049 -1265 7811 16 1 0 chr5 87739472 87740450 -111889700 - L1HS LINE L1 0 6155 5177 1598 26 0 0 chr5 87740448 87740641 -111889509 + L1HS LINE L1 4985 5177 -969 * 511 234 7 26 chr5 87741687 87741841 -111888309 + L1M4 LINE L1 2933 3083 -3063 439 296 56 36 chr5 87741848 87742044 -111888106 - MLT1J LTR MaLR -309 202 3 495 343 137 4 chr5 87742267 87742544 -111887606 - L2 LINE L2 -2 3311 2998 4002 240 50 16 chr5 87742772 87743144 -111887006 - L1MB2 LINE L1 -2 6169 5811 324 0 0 0 chr5 87743144 87743180 -111886970 + (TA)n Simple_repeat Simple_repeat 2 37 0 4002 240 50 16 chr5 87743180 87744956 -111885194 - L1MB2 LINE L1 -360 5811 3938 954 232 58 4 chr5 87744953 87745194 -111884956 - L1 LINE L1 -2082 4064 3811 * 306 0 0 0 chr5 87745353 87745387 -111884763 + (TG)n Simple_repeat Simple_repeat 1 34 0 195 281 0 31 chr5 87745452 87745516 -111884634 + MIR SINE MIR 96 157 -105 4126 212 40 39 chr5 87745607 87746718 -111883432 - L1MC3 LINE L1 0 7785 6673 1252 264 5 26 chr5 87746827 87747345 -111882805 + L1MA6 LINE L1 2035 2695 -4154 677 190 19 6 chr5 87747629 87747790 -111882360 + L1MA6 LINE L1 5480 5646 -1202 2710 182 50 47 chr5 87747804 87748233 -111881917 + L1MA6 LINE L1 5598 6024 -978 2075 134 13 7 chr5 87748233 87748540 -111881610 + AluSp SINE Alu 1 309 -4 2710 182 50 47 chr5 87748540 87749149 -111881001 + L1MA6 LINE L1 6024 6642 -360 901 220 60 114 chr5 87749170 87749856 -111880294 + MER52A LTR ERV1 663 1450 -305 647 270 0 0 chr5 87749880 87750043 -111880107 + MER52A LTR ERV1 1593 1755 0 1442 198 11 36 chr5 87750049 87750407 -111879743 + L1MA6 LINE L1 6651 6999 -3 48 60 0 0 chr5 87750562 87750645 -111879505 + AT_rich Low_complexity Low_complexity 1 83 0 1222 229 75 27 chr5 87750841 87751213 -111878937 + MLT1B LTR MaLR 1 390 0 1579 168 34 0 chr5 87751390 87751652 -111878498 + AluJb SINE Alu 5 275 -37 288 0 0 0 chr5 87751661 87751693 -111878457 + (TAA)n Simple_repeat Simple_repeat 2 33 0 414 241 80 37 chr5 87751943 87752130 -111878020 + L1ME LINE L1 919 1113 -5092 1702 169 55 0 chr5 87752218 87752333 -111877817 + AluJo SINE Alu 3 110 -202 288 0 0 0 chr5 87752333 87752365 -111877785 + (CA)n Simple_repeat Simple_repeat 2 33 0 1702 169 55 0 chr5 87752365 87752539 -111877611 + AluJo SINE Alu 110 308 -4 240 331 24 12 chr5 87752773 87752939 -111877211 + HAL1 LINE L1 1426 1593 -914 25 31 0 0 chr5 87753103 87753135 -111877015 + AT_rich Low_complexity Low_complexity 1 32 0 381 325 66 16 chr5 87753357 87753600 -111876550 + L1ME LINE L1 2119 2373 -4023 1177 245 73 45 chr5 87753606 87754055 -111876095 - MLT1C LTR MaLR 0 467 6 375 248 116 0 chr5 87754060 87754181 -111875969 - MLT1C-int LTR MaLR 0 1371 1237 254 311 73 7 chr5 87754253 87754542 -111875608 + L1ME LINE L1 3241 3548 -2667 2458 164 80 0 chr5 87754602 87755160 -111874990 + L1MA9 LINE L1 5146 5742 -570 537 186 24 1 chr5 87755233 87755459 -111874691 + L1MA9 LINE L1 6020 6308 -4 707 272 88 42 chr5 87755521 87755696 -111874454 + L1ME LINE L1 3604 3769 -2446 378 0 0 0 chr5 87755696 87755738 -111874412 + (TG)n Simple_repeat Simple_repeat 1 42 0 1835 143 0 4 chr5 87755738 87756018 -111874132 - AluSx SINE Alu -33 279 1 707 272 88 42 chr5 87756018 87756316 -111873834 + L1ME LINE L1 3768 4100 -2115 21 0 0 0 chr5 87757159 87757180 -111872970 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 87757236 87757260 -111872890 + AT_rich Low_complexity Low_complexity 1 24 0 1467 158 3 87 chr5 87757264 87757587 -111872563 - AluJb SINE Alu -15 297 2 21 82 0 0 chr5 87757692 87757741 -111872409 + AT_rich Low_complexity Low_complexity 1 49 0 1375 146 126 3 chr5 87757802 87758096 -111872054 - L1MA8 LINE L1 -8 6283 5954 6339 170 45 33 chr5 87758202 87758879 -111871271 - L1MA4 LINE L1 -296 6186 5519 1594 194 0 14 chr5 87758879 87759173 -111870977 - AluJo SINE Alu -22 290 1 6339 170 45 33 chr5 87759173 87760603 -111869547 - L1MA4 LINE L1 -963 5519 4032 7588 29 0 1 chr5 87760611 87762116 -111868034 - L1PA3 LINE L1 0 6155 4653 3626 23 0 0 chr5 87762116 87762544 -111867606 + L1PA3 LINE L1 4221 4648 -1498 2388 208 47 18 chr5 87762589 87763244 -111866906 - L1MA4 LINE L1 -2344 3984 3311 391 86 0 0 chr5 87763461 87763519 -111866631 - L1PA16 LINE L1 -9 6157 6100 1159 258 42 67 chr5 87763522 87763791 -111866359 - L1MA4 LINE L1 -3005 3323 3049 2035 105 0 36 chr5 87763791 87764095 -111866055 + AluSc SINE Alu 3 295 -14 1159 258 42 67 chr5 87764095 87764487 -111865663 - L1MA4 LINE L1 -3279 3049 2678 35 78 0 0 chr5 87764528 87764605 -111865545 + AT_rich Low_complexity Low_complexity 1 77 0 1219 240 37 31 chr5 87764606 87765174 -111864976 - L1MA4 LINE L1 -3653 2675 2095 * 6053 213 43 11 chr5 87765164 87766737 -111863413 - L1MA4 LINE L1 -4065 1263 3 26 50 0 0 chr5 87767267 87767307 -111862843 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr5 87768066 87768087 -111862063 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 87768222 87768257 -111861893 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr5 87768577 87768607 -111861543 + AT_rich Low_complexity Low_complexity 1 30 0 286 258 86 43 chr5 87769056 87769149 -111861001 - MER5A DNA MER1_type -84 105 9 210 212 136 30 chr5 87770535 87770601 -111859549 + L3 LINE CR1 643 715 -862 345 198 0 0 chr5 87771182 87771273 -111858877 + (CA)n Simple_repeat Simple_repeat 2 92 0 290 115 19 0 chr5 87771855 87771907 -111858243 + (TA)n Simple_repeat Simple_repeat 1 53 0 444 327 27 0 chr5 87772796 87772946 -111857204 + MIR SINE MIR 79 232 -30 2143 117 0 0 chr5 87772980 87773354 -111856796 + AluSx SINE Alu 1 374 0 208 302 0 0 chr5 87774195 87774238 -111855912 - MIR SINE MIR -213 49 7 3273 236 41 5 chr5 87775839 87776793 -111853357 - L1 LINE L1 -2820 3326 2339 580 167 0 0 chr5 87776789 87776891 -111853259 + L1MA6 LINE L1 5812 5913 -387 * 785 243 33 0 chr5 87776915 87777125 -111853025 + L1MA6 LINE L1 6084 6300 0 26 30 0 0 chr5 87778017 87778050 -111852100 + AT_rich Low_complexity Low_complexity 1 33 0 1743 224 65 25 chr5 87778288 87779221 -111850929 + L1MC2 LINE L1 2 900 -5007 1917 219 28 176 chr5 87779222 87779824 -111850326 + MLT2B3 LTR ERVL 1 513 -2 2902 213 198 16 chr5 87779836 87780933 -111849217 + L1MC2 LINE L1 948 2244 -4182 3294 258 71 43 chr5 87780956 87782529 -111847621 + L1MC2 LINE L1 2463 4080 -2346 4429 212 49 37 chr5 87782534 87784041 -111846109 + L1MC2 LINE L1 4275 5762 -862 2776 10 0 0 chr5 87784041 87784347 -111845803 + AluYa5 SINE Alu 1 306 -5 4429 212 49 37 chr5 87784347 87784443 -111845707 + L1MC2 LINE L1 5762 5855 -769 2040 137 26 37 chr5 87784443 87784822 -111845328 + THE1C LTR MaLR 1 375 0 4429 212 49 37 chr5 87784822 87785516 -111844634 + L1MC2 LINE L1 5855 6598 -26 285 359 47 16 chr5 87786062 87786190 -111843960 - L2 LINE L2 -3 3269 3138 22 0 0 0 chr5 87786522 87786544 -111843606 + AT_rich Low_complexity Low_complexity 1 22 0 831 199 6 24 chr5 87786649 87786815 -111843335 + Tigger1 DNA MER2_type 1 163 -2255 * 1076 170 42 24 chr5 87786796 87787008 -111843142 + Tigger1 DNA MER2_type 2202 2417 -1 2117 98 0 11 chr5 87787635 87787922 -111842228 + AluSx SINE Alu 14 297 -15 3858 26 2 0 chr5 87788548 87789003 -111841147 + L1PA3 LINE L1 5700 6155 0 683 245 137 54 chr5 87789187 87789522 -111840628 - MLT1A2 LTR MaLR -11 363 1 12306 196 15 8 chr5 87790743 87790772 -111839378 - L1PA14 LINE L1 -3 7596 7569 1854 144 174 8 chr5 87790772 87791139 -111839011 - MSTA LTR MaLR 0 428 1 12306 196 15 8 chr5 87791139 87794548 -111835602 - L1PA14 LINE L1 -30 7569 4145 15941 156 109 3 chr5 87794548 87797264 -111832886 - L1PA14 LINE L1 -4566 3015 11 234 208 0 0 chr5 87797837 87797890 -111832260 + (TA)n Simple_repeat Simple_repeat 2 54 0 33 56 0 0 chr5 87798723 87798777 -111831373 + AT_rich Low_complexity Low_complexity 1 54 0 30 45 0 0 chr5 87799084 87799128 -111831022 + AT_rich Low_complexity Low_complexity 1 44 0 300 220 90 0 chr5 87799855 87799955 -111830195 - MER5C DNA MER1_type -50 274 166 22 0 0 0 chr5 87800416 87800438 -111829712 + AT_rich Low_complexity Low_complexity 1 22 0 235 281 16 0 chr5 87800603 87800667 -111829483 - MIR3 SINE MIR -18 190 126 586 276 136 71 chr5 87800715 87801244 -111828906 + MLT1H LTR MaLR 8 528 -27 198 0 0 0 chr5 87801500 87801522 -111828628 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7168 33 0 0 chr5 87801522 87802374 -111827776 - L1PA3 LINE L1 -18 6137 5286 11479 26 3 1 chr5 87802374 87803751 -111826399 + L1PA3 LINE L1 3930 5308 -838 30 0 0 0 chr5 87805108 87805138 -111825012 + AT_rich Low_complexity Low_complexity 1 30 0 279 376 89 19 chr5 87805706 87806030 -111824120 + HAL1 LINE L1 271 617 -1890 252 246 0 0 chr5 87806073 87806130 -111824020 + (CA)n Simple_repeat Simple_repeat 2 58 0 641 301 134 42 chr5 87806154 87806991 -111823159 + HAL1 LINE L1 657 1570 -937 202 61 61 0 chr5 87807039 87807072 -111823078 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 328 331 128 40 chr5 87807094 87807197 -111822953 + HAL1 LINE L1 1631 1724 -783 2314 107 0 3 chr5 87807197 87807506 -111822644 + AluSx SINE Alu 1 308 -4 328 331 128 40 chr5 87807506 87807653 -111822497 + HAL1 LINE L1 1724 1903 -604 21 36 0 0 chr5 87807773 87807801 -111822349 + AT_rich Low_complexity Low_complexity 1 28 0 1450 198 29 10 chr5 87808038 87808351 -111821799 - L1MC1 LINE L1 -1 6332 6014 280 279 101 34 chr5 87808690 87808898 -111821252 - L1MEc LINE L1 -4640 1756 1535 245 250 0 0 chr5 87809208 87809264 -111820886 + CT-rich Low_complexity Low_complexity 1 56 0 1198 249 50 29 chr5 87809775 87810117 -111820033 + MLT1A1 LTR MaLR 1 349 -16 2216 135 0 0 chr5 87811254 87811565 -111818585 - AluSq SINE Alu -2 311 1 922 214 46 53 chr5 87811939 87812243 -111817907 + L1MA9 LINE L1 5760 6061 -251 * 33449 66 8 2 chr5 87812240 87818360 -111811790 + L1PA5 LINE L1 3 6151 -3 1267 156 26 26 chr5 87818360 87818427 -111811723 + L1MA9 LINE L1 6044 6110 -202 2935 194 27 10 chr5 87818427 87819021 -111811129 - MER6A DNA MER2_type -1 604 1 1267 156 26 26 chr5 87819021 87819220 -111810930 + L1MA9 LINE L1 6109 6312 0 1697 366 35 12 chr5 87819674 87820527 -111809623 + HERVL LTR ERVL 689 1561 -3435 1911 344 76 25 chr5 87820577 87822263 -111807887 + HERVL LTR ERVL 1708 3487 -2167 760 335 32 67 chr5 87822454 87823312 -111806838 + HERVL LTR ERVL 4125 4951 -703 22 0 0 0 chr5 87824210 87824232 -111805918 + AT_rich Low_complexity Low_complexity 1 22 0 274 326 43 0 chr5 87825679 87825771 -111804379 + MER5A DNA MER1_type 9 104 -85 675 315 103 35 chr5 87826491 87826917 -111803233 + LTR33 LTR ERVL 54 508 -13 523 284 30 6 chr5 87827121 87827290 -111802860 - MER97b DNA MER1_type? -875 178 6 474 297 77 26 chr5 87827574 87827992 -111802158 - L1M4 LINE L1 -1701 4445 4007 276 30 0 0 chr5 87828152 87828185 -111801965 + (CA)n Simple_repeat Simple_repeat 2 34 0 432 290 116 54 chr5 87828750 87829157 -111800993 - L1M4 LINE L1 -2880 3266 2835 23 78 0 0 chr5 87829826 87829877 -111800273 + AT_rich Low_complexity Low_complexity 1 51 0 336 94 0 0 chr5 87831382 87831435 -111798715 + (TG)n Simple_repeat Simple_repeat 2 54 0 271 59 0 0 chr5 87831761 87831795 -111798355 - U2 snRNA snRNA -154 34 1 21 0 0 0 chr5 87832326 87832347 -111797803 + AT_rich Low_complexity Low_complexity 1 21 0 1768 163 180 45 chr5 87832353 87832802 -111797348 + LTR54 LTR ERV1 1 510 0 523 311 43 30 chr5 87832818 87832932 -111797218 + LTR23-int LTR ERV1 1917 2028 -4303 2261 224 40 74 chr5 87832932 87833676 -111796474 - MER72 LTR ERV1 0 722 4 523 311 43 30 chr5 87833676 87833796 -111796354 + LTR23-int LTR ERV1 2028 2154 -4177 279 287 11 21 chr5 87833952 87834046 -111796104 + LTR23-int LTR ERV1 2106 2198 -4133 367 284 0 11 chr5 87834431 87834526 -111795624 + LTR23-int LTR ERV1 2449 2542 -3789 942 184 4 78 chr5 87834597 87834841 -111795309 + LTR23-int LTR ERV1 617 842 -6695 490 271 68 1 chr5 87834943 87835109 -111795041 + LTR23-int LTR ERV1 853 2630 -3701 9730 268 40 42 chr5 87835211 87835278 -111794872 - L1PA12 LINE L1 -1908 5676 5610 2046 123 7 27 chr5 87835278 87835579 -111794571 - AluSq SINE Alu -18 295 1 9730 268 40 42 chr5 87835579 87841206 -111788944 - L1PA12 LINE L1 -1974 5610 1 3385 231 82 49 chr5 87841222 87841841 -111788309 + LTR23-int LTR ERV1 2472 3069 -1802 2096 129 0 28 chr5 87841841 87842158 -111787992 - AluSx SINE Alu -4 308 1 1497 208 17 17 chr5 87842159 87842457 -111787693 - AluJo SINE Alu -11 301 4 3385 231 82 49 chr5 87842457 87843589 -111786561 + LTR23-int LTR ERV1 3068 3817 -1054 181 269 92 67 chr5 87843589 87843708 -111786442 - L3 LINE CR1 -211 1366 1245 588 304 12 6 chr5 87843717 87843885 -111786265 + LTR23-int LTR ERV1 3935 4103 -768 1889 270 38 12 chr5 87844082 87844579 -111785571 + LTR23-int LTR ERV1 6635 7144 -393 1226 167 65 4 chr5 87844579 87844886 -111785264 + LTR54 LTR ERV1 1 381 -129 1291 61 5 77 chr5 87844906 87845102 -111785048 + LTR9B LTR ERV1 1 182 -462 3004 137 17 4 chr5 87846159 87846628 -111783522 + LTR9B LTR ERV1 170 644 0 204 345 62 26 chr5 87847139 87847252 -111782898 - L2 LINE L2 -237 3035 2919 1600 266 48 50 chr5 87847596 87848235 -111781915 + L1MCb LINE L1 15 652 -5393 923 196 59 5 chr5 87848236 87848455 -111781695 + LTR8 LTR ERV1 1 231 -460 2368 63 0 32 chr5 87848461 87848776 -111781374 + AluY SINE Alu 1 305 -6 882 319 58 9 chr5 87848785 87849111 -111781039 + LTR8 LTR ERV1 350 691 0 365 293 22 67 chr5 87849111 87849336 -111780814 + L1MCb LINE L1 650 864 -5181 481 307 27 0 chr5 87849341 87849491 -111780659 - LTR52 LTR ERVL -2 419 266 1248 220 42 31 chr5 87849494 87849956 -111780194 - LTR29 LTR ERV1 -2 642 137 260 292 21 21 chr5 87849961 87850057 -111780093 - MER34 LTR ERV1 -446 96 1 784 253 64 8 chr5 87850057 87850306 -111779844 - LTR52 LTR ERVL -153 268 6 2832 238 75 47 chr5 87850335 87851701 -111778449 + L1MCb LINE L1 897 2223 -4522 2173 108 10 0 chr5 87851701 87851997 -111778153 + AluSc SINE Alu 1 299 -10 1315 55 0 16 chr5 87852000 87852183 -111777967 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2832 238 75 47 chr5 87852183 87852345 -111777805 + L1MCb LINE L1 2224 2717 -4028 2171 158 7 32 chr5 87852351 87852756 -111777394 + L1PA13 LINE L1 5758 6152 -11 5217 272 41 23 chr5 87852820 87855151 -111774999 + L1MCb LINE L1 2687 5059 -1505 6800 71 1 0 chr5 87855300 87856442 -111773708 + L1PA7 LINE L1 5013 6151 -3 1001 281 65 70 chr5 87856478 87857282 -111772868 + L1MCc LINE L1 807 1602 -4900 2174 185 78 37 chr5 87857326 87857797 -111772353 + MLT2B1 LTR ERVL 1 493 -27 377 257 74 55 chr5 87857923 87858001 -111772149 - L1M4 LINE L1 -3012 3134 3059 2151 122 3 0 chr5 87858001 87858295 -111771855 - AluSp SINE Alu -18 295 1 377 257 74 55 chr5 87858295 87858473 -111771677 - L1M4 LINE L1 -3087 3059 2873 3689 254 52 55 chr5 87858473 87859906 -111770244 + L1MC4a LINE L1 6379 7807 -1 886 110 0 24 chr5 87860148 87860275 -111769875 - AluSg/x SINE Alu -19 293 170 607 235 150 7 chr5 87860655 87860808 -111769342 + MER5A DNA MER1_type 1 175 -14 2192 115 0 0 chr5 87860864 87861168 -111768982 - AluSc SINE Alu -5 304 1 336 290 30 0 chr5 87861757 87861857 -111768293 + MER63 DNA MER1_type 959 1061 -1 24 0 0 0 chr5 87862618 87862642 -111767508 + AT_rich Low_complexity Low_complexity 1 24 0 418 315 111 21 chr5 87863213 87863600 -111766550 + L1ME4a LINE L1 5446 5867 -254 273 111 0 0 chr5 87863704 87863749 -111766401 + MER57B LTR ERV1 390 434 0 4788 129 22 2 chr5 87863750 87864591 -111765559 + MER57B-int LTR ERV1 2 859 -5087 * 16971 128 41 21 chr5 87864559 87869086 -111761064 + MER57B-int LTR ERV1 1530 7150 -387 682 125 23 31 chr5 87869086 87869214 -111760936 + LTR54B LTR ERV1 5 131 -367 1373 95 116 45 chr5 87869214 87869456 -111760694 + MER57B-int LTR ERV1 7279 7537 0 2529 149 14 0 chr5 87869456 87869880 -111760270 + MER57B LTR ERV1 1 430 -4 1619 239 101 29 chr5 87869888 87870748 -111759402 + L1MDb LINE L1 756 1680 -4702 299 54 0 0 chr5 87870781 87870818 -111759332 - MER57B LTR ERV1 -292 142 106 349 187 57 6 chr5 87870835 87870950 -111759200 + (TA)n Simple_repeat Simple_repeat 1 109 -325 523 80 13 0 chr5 87870950 87871025 -111759125 - MADE1 DNA Mariner -2 78 3 349 187 57 6 chr5 87871025 87871248 -111758902 + (TA)n Simple_repeat Simple_repeat 109 434 0 3643 264 80 32 chr5 87871257 87873026 -111757124 + L1MD2 LINE L1 896 1772 -4610 6607 60 43 0 chr5 87873026 87874079 -111756071 - L1PA7 LINE L1 -3 6151 5089 3643 264 80 32 chr5 87874079 87876680 -111753470 + L1MD2 LINE L1 1772 4246 -2136 2075 211 20 10 chr5 87876682 87877270 -111752880 + L1M2 LINE L1 4850 5441 -743 * 4224 160 27 1 chr5 87877269 87878198 -111751952 - L1PB2 LINE L1 -195 5956 5008 776 194 21 0 chr5 87878198 87878384 -111751766 + L1MA7 LINE L1 6102 6291 0 33 73 0 0 chr5 87878496 87878564 -111751586 + AT_rich Low_complexity Low_complexity 1 68 0 870 263 116 35 chr5 87878579 87879150 -111751000 + L1MD2 LINE L1 4194 4810 -1572 3217 241 33 62 chr5 87879157 87879346 -111750804 + L1MD2 LINE L1 5203 5396 -1199 1989 148 138 5 chr5 87879346 87879724 -111750426 + MSTA LTR MaLR 1 428 0 3217 241 33 62 chr5 87879724 87880883 -111749267 + L1MD2 LINE L1 5396 6505 -90 611 343 85 7 chr5 87881101 87881538 -111748612 - L1MC4a LINE L1 -1893 5915 5445 2210 152 56 2 chr5 87881703 87882097 -111748053 + MSTA LTR MaLR 1 415 -13 28 29 0 0 chr5 87882467 87882502 -111747648 + AT_rich Low_complexity Low_complexity 1 35 0 207 69 0 0 chr5 87883457 87883486 -111746664 + (CA)n Simple_repeat Simple_repeat 2 30 0 255 228 69 30 chr5 87884090 87884191 -111745959 + MER65A LTR ERV1 24 128 -317 681 353 113 12 chr5 87884940 87885340 -111744810 + LTR16B LTR ERVL 13 452 -12 21 36 0 0 chr5 87885549 87885577 -111744573 + AT_rich Low_complexity Low_complexity 1 28 0 24 77 0 0 chr5 87885662 87885714 -111744436 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 87885808 87885829 -111744321 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 87885885 87885907 -111744243 + AT_rich Low_complexity Low_complexity 1 22 0 409 340 47 14 chr5 87885987 87886202 -111743948 + L1ME LINE L1 197 418 -5652 295 302 19 71 chr5 87886305 87886517 -111743633 + L1ME LINE L1 489 689 -5381 1883 39 0 0 chr5 87886548 87886780 -111743370 + L1PA5 LINE L1 5923 6154 0 578 307 50 38 chr5 87886811 87887341 -111742809 + L1ME LINE L1 873 1579 -4668 1703 249 43 31 chr5 87887664 87888251 -111741899 + L1MD1 LINE L1 5648 6241 -1 361 241 36 0 chr5 87888438 87888550 -111741600 + L1M4 LINE L1 4164 4279 -1867 319 300 31 130 chr5 87888550 87888903 -111741247 - L1ME LINE L1 -524 5638 5321 22 56 0 0 chr5 87888946 87888982 -111741168 + AT_rich Low_complexity Low_complexity 1 36 0 824 158 89 46 chr5 87889324 87889588 -111740562 + MLT1A1 LTR MaLR 2 365 0 12345 193 72 10 chr5 87889649 87894262 -111735888 - L1PBa LINE L1 -1274 5588 694 998 262 90 8 chr5 87894289 87894656 -111735494 - L1PBa LINE L1 -6461 402 6 189 147 0 0 chr5 87895121 87895155 -111734995 + (T)n Simple_repeat Simple_repeat 1 34 0 25 31 0 0 chr5 87895361 87895393 -111734757 + AT_rich Low_complexity Low_complexity 1 32 0 576 233 23 0 chr5 87895907 87896036 -111734114 - MER58B DNA MER1_type -12 329 198 1067 226 77 62 chr5 87896057 87896447 -111733703 + MSTD LTR MaLR 1 396 0 278 358 37 5 chr5 87896762 87896949 -111733201 - HAL1 LINE L1 -846 1661 1469 1318 237 60 44 chr5 87896962 87897459 -111732691 + MLT1D LTR MaLR 1 505 0 22 35 0 0 chr5 87898018 87898047 -111732103 + AT_rich Low_complexity Low_complexity 1 29 0 288 284 176 14 chr5 87899250 87899398 -111730752 - MIR SINE MIR 0 262 91 1340 244 13 21 chr5 87900529 87900902 -111729248 - MLT1A2 LTR MaLR -4 370 1 245 192 13 103 chr5 87900991 87901069 -111729081 + L2 LINE L2 3243 3313 0 746 336 24 4 chr5 87901100 87901350 -111728800 + MIR SINE MIR 5 259 -3 1868 158 0 16 chr5 87901523 87901834 -111728316 - AluSx SINE Alu 0 312 7 33 43 0 0 chr5 87902567 87902614 -111727536 + AT_rich Low_complexity Low_complexity 1 47 0 47 86 0 0 chr5 87902932 87903049 -111727101 + AT_rich Low_complexity Low_complexity 1 117 0 22 70 0 0 chr5 87904578 87904621 -111725529 + AT_rich Low_complexity Low_complexity 1 43 0 1946 152 119 16 chr5 87904939 87905327 -111724823 + MSTA LTR MaLR 1 428 0 3405 163 21 63 chr5 87905331 87906041 -111724109 + MSTA-int LTR MaLR 6 685 -895 25 0 0 0 chr5 87907815 87907840 -111722310 + AT_rich Low_complexity Low_complexity 1 25 0 292 247 52 10 chr5 87907949 87908046 -111722104 - L1ME LINE L1 -435 5729 5629 1090 219 38 82 chr5 87908134 87908500 -111721650 - MLT2D LTR ERVL -64 350 1 230 184 122 0 chr5 87908753 87908802 -111721348 + MLT2D LTR ERVL 298 352 -62 348 24 0 0 chr5 87908817 87908858 -111721292 + (TG)n Simple_repeat Simple_repeat 2 42 0 192 200 0 0 chr5 87908870 87908910 -111721240 + (CA)n Simple_repeat Simple_repeat 2 41 0 273 214 0 0 chr5 87908956 87909012 -111721138 + L1ME LINE L1 5625 5680 -484 187 253 0 80 chr5 87909373 87909448 -111720702 - L2 LINE L2 -2721 593 525 429 232 36 0 chr5 87912321 87912433 -111717717 - L1ME LINE L1 -415 5818 5703 530 259 35 26 chr5 87912483 87912715 -111717435 - L1ME LINE L1 -668 5563 5330 * 964 118 0 0 chr5 87912712 87912847 -111717303 - L1P3 LINE L1 -6317 144 10 348 276 98 31 chr5 87912864 87913027 -111717123 - L1ME LINE L1 -4023 2373 2200 315 281 129 0 chr5 87913052 87913191 -111716959 - L1ME LINE L1 -4257 2139 1983 21 0 0 0 chr5 87913857 87913878 -111716272 + AT_rich Low_complexity Low_complexity 1 21 0 4341 248 34 33 chr5 87913914 87915237 -111714913 - L1MC3 LINE L1 -583 7202 5879 21 0 0 0 chr5 87915243 87915264 -111714886 + AT_rich Low_complexity Low_complexity 1 21 0 1325 200 33 11 chr5 87915264 87915539 -111714611 - AluJb SINE Alu -25 287 7 1641 219 18 3 chr5 87915545 87915928 -111714222 - L1MC3 LINE L1 -456 5888 5500 816 200 13 0 chr5 87916082 87916237 -111713913 + L1MC/D LINE L1 5493 5649 -2136 234 193 0 0 chr5 87916337 87916394 -111713756 + (TA)n Simple_repeat Simple_repeat 2 58 0 324 167 56 37 chr5 87916691 87916853 -111713297 + (TATAA)n Simple_repeat Simple_repeat 5 169 0 229 195 60 27 chr5 87916784 87916933 -111713217 + (TTATA)n Simple_repeat Simple_repeat 1 154 0 * 203 188 21 0 chr5 87917190 87917238 -111712912 + (TG)n Simple_repeat Simple_repeat 2 50 0 263 203 14 0 chr5 87917262 87917331 -111712819 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 213 94 0 0 chr5 87917803 87917835 -111712315 + (TG)n Simple_repeat Simple_repeat 2 33 0 215 197 91 0 chr5 87918069 87918135 -111712015 - MIR SINE MIR -99 163 92 43 35 0 0 chr5 87919313 87919370 -111710780 + AT_rich Low_complexity Low_complexity 1 57 0 21 36 0 0 chr5 87919638 87919666 -111710484 + AT_rich Low_complexity Low_complexity 1 28 0 338 249 66 88 chr5 87921703 87922068 -111708082 + L1MC5 LINE L1 7505 7861 -100 227 241 52 0 chr5 87922114 87922172 -111707978 - MIR SINE MIR -30 232 172 1089 209 25 17 chr5 87922172 87922407 -111707743 + AluJo SINE Alu 1 237 -75 24 0 0 0 chr5 87922418 87922442 -111707708 + AT_rich Low_complexity Low_complexity 1 24 0 412 173 62 0 chr5 87922442 87922523 -111707627 - MIR SINE MIR -76 186 101 22 0 0 0 chr5 87923881 87923903 -111706247 + AT_rich Low_complexity Low_complexity 1 22 0 2003 178 22 0 chr5 87924014 87924385 -111705765 + L1PA16 LINE L1 5788 6166 0 24 32 0 0 chr5 87924395 87924426 -111705724 + AT_rich Low_complexity Low_complexity 1 31 0 1776 271 67 50 chr5 87926028 87926734 -111703416 - L1ME3A LINE L1 -9 6161 5436 1174 150 12 43 chr5 87926734 87926777 -111703373 - L1MA9 LINE L1 -6 6306 6263 1690 74 0 5 chr5 87926777 87926993 -111703157 + AluSc SINE Alu 84 298 -11 1174 150 12 43 chr5 87926993 87927202 -111702948 - L1MA9 LINE L1 -49 6263 6062 1776 271 67 50 chr5 87927202 87927362 -111702788 - L1ME3A LINE L1 -734 5436 5280 22 35 0 0 chr5 87927886 87927915 -111702235 + AT_rich Low_complexity Low_complexity 1 29 0 253 291 138 31 chr5 87929840 87930101 -111700049 + Tigger8 DNA MER2_type 223 511 -155 2476 293 75 42 chr5 87931681 87932137 -111698013 + L1M1 LINE L1 65 504 -7061 550 112 0 0 chr5 87932137 87932226 -111697924 - L1PB1 LINE L1 0 6151 6063 2476 293 75 42 chr5 87932226 87933423 -111696727 + L1M1 LINE L1 504 2432 -5133 1534 235 52 18 chr5 87934683 87935186 -111694964 + L1M1 LINE L1 2417 2936 -4629 7044 177 59 24 chr5 87935198 87936637 -111693513 + L1MA4 LINE L1 3 1390 -5225 1729 179 127 16 chr5 87936637 87937022 -111693128 - MSTA LTR MaLR 0 428 1 8590 160 16 35 chr5 87937023 87938630 -111691520 - MSTA-int LTR MaLR -1 1579 3 1660 177 145 16 chr5 87938632 87939011 -111691139 - MSTA LTR MaLR 0 428 1 7044 177 59 24 chr5 87939011 87939763 -111690387 + L1MA4 LINE L1 1390 2114 -4501 188 86 29 0 chr5 87939763 87939798 -111690352 + (TA)n Simple_repeat Simple_repeat 1 36 0 180 0 0 0 chr5 87939797 87939817 -111690333 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 7044 177 59 24 chr5 87939798 87940804 -111689346 + L1MA4 LINE L1 2114 6492 -123 * 19282 166 6 12 chr5 87940802 87940975 -111689175 + L1P3 LINE L1 1039 1212 -5249 216 67 0 0 chr5 87940975 87941005 -111689145 + (CAA)n Simple_repeat Simple_repeat 1 30 0 19282 166 6 12 chr5 87941005 87944483 -111685667 + L1P3 LINE L1 1212 4729 -1732 4815 190 71 9 chr5 87944602 87945739 -111684411 + L1MC1 LINE L1 5121 6320 -13 677 124 0 8 chr5 87945858 87945979 -111684171 + (TTCC)n Simple_repeat Simple_repeat 3 122 0 21 36 0 0 chr5 87946424 87946452 -111683698 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 87947183 87947212 -111682938 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 87947579 87947621 -111682529 + AT_rich Low_complexity Low_complexity 1 42 0 20172 175 24 17 chr5 87948334 87952580 -111677570 + L1M1 LINE L1 12 4286 -3279 267 205 12 48 chr5 87952665 87952748 -111677402 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 31 26 0 0 chr5 87953326 87953364 -111676786 + AT_rich Low_complexity Low_complexity 1 38 0 206 81 27 0 chr5 87953982 87954019 -111676131 + (CA)n Simple_repeat Simple_repeat 1 38 0 499 225 38 4 chr5 87954267 87954407 -111675743 + L1MA10 LINE L1 6174 6325 0 438 276 83 70 chr5 87954556 87954857 -111675293 - L2 LINE L2 -764 2550 2246 31 92 0 0 chr5 87955137 87955224 -111674926 + AT_rich Low_complexity Low_complexity 1 87 0 456 272 0 32 chr5 87955589 87955714 -111674436 - L2 LINE L2 0 3313 3193 365 278 51 51 chr5 87955879 87956055 -111674095 + L1MC4 LINE L1 7712 7887 -155 206 229 0 21 chr5 87956261 87956309 -111673841 + GA-rich Low_complexity Low_complexity 2 48 0 455 282 123 73 chr5 87957479 87957699 -111672451 + MIR SINE MIR 11 241 -21 198 0 0 0 chr5 87959611 87959633 -111670517 + (CATATA)n Simple_repeat Simple_repeat 2 23 0 1561 178 37 55 chr5 87959644 87960026 -111670124 - THE1C LTR MaLR 0 375 1 8726 147 62 10 chr5 87960026 87961528 -111668622 - THE1C-int LTR MaLR 0 1580 1 1558 170 75 92 chr5 87961530 87961928 -111668222 - THE1C LTR MaLR -2 373 3 407 151 0 27 chr5 87961936 87962009 -111668141 - THE1C LTR MaLR -301 74 4 21 57 0 0 chr5 87962403 87962438 -111667712 + AT_rich Low_complexity Low_complexity 1 35 0 474 294 56 33 chr5 87963048 87963228 -111666922 + MIR SINE MIR 1 184 -78 2182 126 132 5 chr5 87963958 87964338 -111665812 - MSTA LTR MaLR 0 428 1 2628 204 50 2 chr5 87965879 87966438 -111663712 - L1MC2 LINE L1 -3 6341 5756 1510 260 99 23 chr5 87966436 87966931 -111663219 - L1MCa LINE L1 -3040 3386 2809 * 2036 148 80 3 chr5 87966931 87967296 -111662854 + L1PA15 LINE L1 5773 6165 0 1510 260 99 23 chr5 87967296 87967574 -111662576 - L1MCa LINE L1 -3617 2809 2554 670 262 81 16 chr5 87967608 87968101 -111662049 - L1MCa LINE L1 -4002 2605 2043 181 194 48 0 chr5 87968151 87968316 -111661834 + (TA)n Simple_repeat Simple_repeat 1 173 0 * 306 209 26 0 chr5 87968215 87968490 -111661660 + (TA)n Simple_repeat Simple_repeat 1 282 0 28 0 0 0 chr5 87968491 87968519 -111661631 + AT_rich Low_complexity Low_complexity 1 28 0 412 346 45 21 chr5 87969175 87969418 -111660732 - MIR SINE MIR 0 262 14 25 65 0 0 chr5 87969677 87969723 -111660427 + AT_rich Low_complexity Low_complexity 1 46 0 26 30 0 0 chr5 87969826 87969859 -111660291 + AT_rich Low_complexity Low_complexity 1 33 0 628 295 121 58 chr5 87970518 87970881 -111659269 + LTR16B LTR ERVL 1 386 -78 859 238 62 21 chr5 87970939 87971004 -111659146 - L1MC2 LINE L1 -421 5745 5684 321 100 0 0 chr5 87971004 87971054 -111659096 + (TG)n Simple_repeat Simple_repeat 1 50 0 859 238 62 21 chr5 87971054 87971228 -111658922 - L1MC2 LINE L1 -482 5684 5496 374 35 35 47 chr5 87971232 87971317 -111658833 + (TA)n Simple_repeat Simple_repeat 1 84 0 280 182 84 0 chr5 87971351 87971494 -111658656 + (TA)n Simple_repeat Simple_repeat 2 156 0 21 0 0 0 chr5 87971539 87971560 -111658590 + AT_rich Low_complexity Low_complexity 1 21 0 440 295 47 16 chr5 87971658 87971848 -111658302 - L1ME1 LINE L1 -5 6161 5966 1036 275 51 13 chr5 87971858 87972171 -111657979 - LTR53 LTR ERVL 0 519 195 1311 229 86 63 chr5 87972358 87972590 -111657560 - L1ME1 LINE L1 -273 5893 5668 186 43 0 0 chr5 87972590 87972613 -111657537 + (TG)n Simple_repeat Simple_repeat 1 23 0 1311 229 86 63 chr5 87972613 87972680 -111657470 - L1ME1 LINE L1 -498 5668 5604 891 74 0 16 chr5 87972680 87972802 -111657348 - L1PA8 LINE L1 -6 6166 6047 1311 229 86 63 chr5 87972802 87972978 -111657172 - L1ME1 LINE L1 -562 5604 5406 21 36 0 0 chr5 87972986 87973014 -111657136 + AT_rich Low_complexity Low_complexity 1 28 0 255 170 0 0 chr5 87973352 87973399 -111656751 + HAL1b LINE L1 746 792 -556 216 328 49 25 chr5 87973670 87973792 -111656358 - MIR SINE MIR -6 256 132 517 279 64 41 chr5 87974286 87974331 -111655819 + MER58A DNA MER1_type 1 43 -2377 198 71 0 0 chr5 87974331 87974359 -111655791 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 517 279 64 41 chr5 87974359 87974532 -111655618 + MER58A DNA MER1_type 43 224 0 213 39 0 0 chr5 87975049 87975075 -111655075 + (CAA)n Simple_repeat Simple_repeat 2 27 0 452 280 92 23 chr5 87976963 87977181 -111652969 - LTR50 LTR ERVL -55 740 508 1004 254 81 104 chr5 87977602 87978256 -111651894 - L1MC4 LINE L1 -139 7903 7265 336 78 250 0 chr5 87978256 87978320 -111651830 + MADE1 DNA Mariner 1 80 0 683 239 84 31 chr5 87978344 87978426 -111651724 - L1MC4 LINE L1 -954 7088 7012 1934 192 33 33 chr5 87978426 87978854 -111651296 - MSTC LTR MaLR 0 428 1 683 239 84 31 chr5 87978854 87978997 -111651153 - L1MC4 LINE L1 -1030 7012 6851 302 346 0 16 chr5 87979309 87979436 -111650714 + L1M4 LINE L1 3623 3747 -2399 324 276 143 62 chr5 87979512 87980238 -111649912 + L1M4 LINE L1 3784 4568 -1578 310 333 43 5 chr5 87980334 87980520 -111649630 + L1M4 LINE L1 4759 4951 -1195 182 206 16 0 chr5 87980612 87980675 -111649475 + (TA)n Simple_repeat Simple_repeat 2 65 0 698 262 0 0 chr5 87980721 87980912 -111649238 - L1MA5 LINE L1 -172 6128 5938 180 176 0 0 chr5 87980962 87980996 -111649154 + (TA)n Simple_repeat Simple_repeat 1 34 0 26 74 0 0 chr5 87981003 87981057 -111649093 + AT_rich Low_complexity Low_complexity 1 54 0 1568 185 17 14 chr5 87981523 87981879 -111648271 + L1MA5 LINE L1 5938 6294 -6 21 0 0 0 chr5 87981879 87981900 -111648250 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 87982177 87982200 -111647950 + AT_rich Low_complexity Low_complexity 1 23 0 30270 50 35 11 chr5 87982297 87986306 -111643844 + L1P LINE L1 3 4107 -2039 292 196 0 22 chr5 87986414 87986506 -111643644 + L1MC4 LINE L1 6614 6703 -1339 3481 31 5 0 chr5 87986509 87986927 -111643223 - L1PA5 LINE L1 -12 6142 5723 29 0 0 0 chr5 87987430 87987459 -111642691 + AT_rich Low_complexity Low_complexity 1 29 0 28 79 0 0 chr5 87987691 87987754 -111642396 + AT_rich Low_complexity Low_complexity 1 63 0 286 246 31 15 chr5 87988044 87988174 -111641976 + (TA)n Simple_repeat Simple_repeat 2 133 0 31 0 0 0 chr5 87988249 87988280 -111641870 + AT_rich Low_complexity Low_complexity 1 31 0 537 159 73 20 chr5 87988288 87988439 -111641711 + MER53 DNA DNA 24 182 -7 21 57 0 0 chr5 87988557 87988592 -111641558 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr5 87989199 87989241 -111640909 + AT_rich Low_complexity Low_complexity 1 42 0 621 293 84 21 chr5 87989392 87989603 -111640547 + MIR SINE MIR 7 236 -26 1999 142 43 68 chr5 87989603 87990046 -111640104 - MSTB1 LTR MaLR 0 432 1 621 293 84 21 chr5 87990046 87990073 -111640077 + MIR SINE MIR 236 260 -2 411 318 102 19 chr5 87990126 87990462 -111639688 - L1MC4a LINE L1 -302 5819 5491 600 288 55 31 chr5 87990604 87990896 -111639254 + Charlie2b DNA MER1_type 359 657 -2125 4590 102 23 41 chr5 87991843 87992549 -111637601 - HSMAR1 DNA Mariner -1 1286 594 1035 234 35 36 chr5 87992610 87992909 -111637241 - MLT2B2 LTR ERVL -40 480 137 348 83 0 0 chr5 87993117 87993165 -111636985 + (A)n Simple_repeat Simple_repeat 1 48 0 2495 99 3 22 chr5 87994120 87994482 -111635668 + THE1A LTR MaLR 1 355 0 4943 104 1 78 chr5 87994482 87995300 -111634850 + THE1A-int LTR MaLR 1 755 -825 704 161 0 0 chr5 87995307 87995419 -111634731 + THE1A LTR MaLR 244 355 0 716 191 159 26 chr5 87995586 87995775 -111634375 + MER20 DNA MER1_type 2 215 -4 270 175 0 0 chr5 87996261 87996301 -111633849 + L1PA8A LINE L1 1 40 -6747 1520 121 28 0 chr5 87996301 87996550 -111633600 + L1PA13 LINE L1 5906 6161 -2 304 282 0 0 chr5 87996550 87996628 -111633522 + MIR SINE MIR 185 262 0 449 130 0 19 chr5 87996630 87996738 -111633412 + (TTC)n Simple_repeat Simple_repeat 3 108 0 342 254 62 98 chr5 87997647 87997923 -111632227 + MLT1J LTR MaLR 229 494 -17 28536 144 13 54 chr5 87997991 88004566 -111625584 + L1PA8A LINE L1 658 6779 -3 30 69 0 0 chr5 88004844 88004902 -111625248 + AT_rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr5 88005238 88005260 -111624890 + AT_rich Low_complexity Low_complexity 1 22 0 2162 95 0 11 chr5 88006141 88006457 -111623693 - AluSc SINE Alu 0 313 1 22 0 0 0 chr5 88006466 88006488 -111623662 + AT_rich Low_complexity Low_complexity 1 22 0 2249 146 41 21 chr5 88007088 88007507 -111622643 + MSTA LTR MaLR 1 427 -1 303 325 27 79 chr5 88007867 88008236 -111621914 + L2 LINE L2 1981 2330 -984 1719 153 43 10 chr5 88008316 88008616 -111621534 - AluJo SINE Alu 0 312 3 239 309 8 89 chr5 88008703 88008826 -111621324 + L2 LINE L2 3199 3311 -2 338 280 128 16 chr5 88008941 88009066 -111621084 + MER58C DNA MER1_type 28 166 -49 279 79 0 0 chr5 88009066 88009104 -111621046 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 255 222 22 22 chr5 88009104 88009194 -111620956 + L1MC4 LINE L1 6614 6703 -1339 231 204 0 0 chr5 88009194 88009243 -111620907 + (TA)n Simple_repeat Simple_repeat 1 49 0 235 238 16 16 chr5 88009279 88009342 -111620808 - MER91B DNA MER1_type -127 63 1 272 303 239 0 chr5 88010786 88010941 -111619209 - MIR SINE MIR -6 256 65 241 65 65 16 chr5 88010945 88011007 -111619143 + (TA)n Simple_repeat Simple_repeat 1 65 0 180 111 0 0 chr5 88011247 88011274 -111618876 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1007 251 40 42 chr5 88011421 88011691 -111618459 - L1MB8 LINE L1 -37 6141 5871 1370 226 22 103 chr5 88011691 88012236 -111617914 + MLT1D LTR MaLR 3 503 -2 1007 251 40 42 chr5 88012236 88012319 -111617831 - L1MB8 LINE L1 -307 5871 5789 814 200 176 4 chr5 88012324 88012768 -111617382 - L1MB8 LINE L1 -572 5590 5077 * 2364 267 42 24 chr5 88012767 88013714 -111616436 - L1MB8 LINE L1 -2094 4052 3089 512 325 48 44 chr5 88013734 88014029 -111616121 - ERVL LTR ERVL -1505 4259 3964 22 35 0 0 chr5 88014654 88014683 -111615467 + AT_rich Low_complexity Low_complexity 1 29 0 340 261 35 0 chr5 88016054 88016196 -111613954 + (TA)n Simple_repeat Simple_repeat 1 147 0 615 318 11 80 chr5 88018560 88018704 -111611446 + LTR16C LTR ERVL 71 223 -268 1208 251 114 11 chr5 88018704 88019063 -111611087 + MSTD LTR MaLR 1 396 0 615 318 11 80 chr5 88019063 88019270 -111610880 + LTR16C LTR ERVL 223 398 -93 21 36 0 0 chr5 88019590 88019618 -111610532 + AT_rich Low_complexity Low_complexity 1 28 0 355 350 24 11 chr5 88019671 88020062 -111610088 - ERVL LTR ERVL -2404 3081 2657 366 23 0 0 chr5 88020847 88020890 -111609260 + (TC)n Simple_repeat Simple_repeat 2 44 0 23 0 0 0 chr5 88022048 88022071 -111608079 + AT_rich Low_complexity Low_complexity 1 23 0 1512 188 54 20 chr5 88022599 88022950 -111607200 - MLT1B LTR MaLR 0 390 28 238 361 150 0 chr5 88024179 88024312 -111605838 + MIR SINE MIR 32 184 -78 8013 110 5 3 chr5 88024449 88026427 -111603723 - L1PA7 LINE L1 -5 6149 4174 10112 33 0 0 chr5 88026530 88028523 -111601627 + L1PA3 LINE L1 4162 6155 0 33 0 0 0 chr5 88028523 88028556 -111601594 + AT_rich Low_complexity Low_complexity 1 33 0 1937 102 0 4 chr5 88029207 88029462 -111600688 + AluSg SINE Alu 1 254 -56 1696 173 0 20 chr5 88030036 88030337 -111599813 + AluJb SINE Alu 1 295 -17 23 33 0 0 chr5 88030569 88030599 -111599551 + AT_rich Low_complexity Low_complexity 1 30 0 275 105 0 0 chr5 88030794 88030832 -111599318 - LTR18B LTR ERVL -317 297 260 * 698 149 8 22 chr5 88030824 88030958 -111599192 - LTR18B LTR ERVL -153 461 330 227 286 0 0 chr5 88030974 88031030 -111599120 + CT-rich Low_complexity Low_complexity 1 56 0 1692 161 3 28 chr5 88033737 88034028 -111596122 - AluJo SINE Alu -22 290 7 296 278 37 47 chr5 88035199 88035390 -111594760 + MER117 DNA MER1_type 8 196 -1 22 35 0 0 chr5 88036597 88036626 -111593524 + AT_rich Low_complexity Low_complexity 1 29 0 196 385 10 10 chr5 88036791 88036887 -111593263 - MIR3 SINE MIR -50 158 63 300 258 26 13 chr5 88037306 88037457 -111592693 + (TATAA)n Simple_repeat Simple_repeat 2 154 0 316 109 0 0 chr5 88038655 88038701 -111591449 + MSTB LTR MaLR 381 426 0 2104 232 63 30 chr5 88038710 88039404 -111590746 - L1MC4a LINE L1 -1495 6313 5597 359 214 0 24 chr5 88039563 88039647 -111590503 + MER77 LTR ERV1 57 138 -467 1395 275 40 11 chr5 88039818 88040562 -111589588 - L1MEc LINE L1 -3068 3780 2996 283 241 0 0 chr5 88040593 88040672 -111589478 - L1MEc LINE L1 -4580 2449 2371 355 241 54 9 chr5 88041633 88041745 -111588405 + MER20B DNA MER1_type 43 159 -624 583 294 29 15 chr5 88041806 88042078 -111588072 + MARNA DNA Mariner 168 443 -143 2172 126 131 8 chr5 88043011 88043392 -111586758 - MSTA LTR MaLR 0 428 1 393 287 84 18 chr5 88044328 88044495 -111585655 + MIR3 SINE MIR 17 194 -14 32 26 0 0 chr5 88044888 88044927 -111585223 + AT_rich Low_complexity Low_complexity 1 39 0 330 306 147 6 chr5 88047320 88047490 -111582660 - MIR SINE MIR -18 244 51 686 165 0 104 chr5 88047884 88048048 -111582102 - MER58A DNA MER1_type 0 147 1 670 309 51 8 chr5 88048252 88048488 -111581662 - MIR SINE MIR 0 262 17 1423 196 47 36 chr5 88049051 88049352 -111580798 - AluJo SINE Alu -8 304 1 288 254 0 0 chr5 88050134 88050201 -111579949 + (CCG)n Simple_repeat Simple_repeat 1 67 0 494 288 112 101 chr5 88050279 88050736 -111579414 - L1 LINE L1 -5472 1377 927 180 0 0 0 chr5 88050736 88050756 -111579394 + (CAG)n Simple_repeat Simple_repeat 2 21 0 494 288 112 101 chr5 88050756 88051411 -111578739 - L1 LINE L1 -5922 927 387 320 290 119 72 chr5 88051428 88051721 -111578429 + L1M2 LINE L1 663 969 -5880 23 0 0 0 chr5 88052034 88052057 -111578093 + AT_rich Low_complexity Low_complexity 1 23 0 5204 55 1 35 chr5 88053969 88054714 -111575436 + L1P LINE L1 4 723 -5423 9987 115 8 7 chr5 88055025 88056660 -111573490 + L1P LINE L1 3139 4775 -1371 9922 38 1 26 chr5 88056762 88058162 -111571988 - L1P LINE L1 -2362 3784 2419 377 103 0 0 chr5 88058270 88058328 -111571822 - MER51A LTR ERV1 -576 58 1 49 60 0 0 chr5 88058345 88058429 -111571721 + AT_rich Low_complexity Low_complexity 1 84 0 235 138 95 43 chr5 88058470 88058586 -111571564 + (ATATG)n Simple_repeat Simple_repeat 5 126 0 233 125 18 0 chr5 88058684 88058740 -111571410 + (TA)n Simple_repeat Simple_repeat 1 57 0 189 0 0 0 chr5 88058889 88058910 -111571240 + (CA)n Simple_repeat Simple_repeat 2 22 0 23 0 0 0 chr5 88059910 88059933 -111570217 + AT_rich Low_complexity Low_complexity 1 23 0 182 218 0 18 chr5 88060370 88060425 -111569725 + (TA)n Simple_repeat Simple_repeat 1 54 0 1184 137 0 0 chr5 88060425 88060608 -111569542 + THE1B LTR MaLR 2 184 -180 896 223 65 34 chr5 88062456 88062779 -111567371 - MER58B DNA MER1_type -8 333 1 1571 100 4 0 chr5 88063016 88063245 -111566905 - MER51B LTR ERV1 0 377 148 3793 128 10 0 chr5 88063345 88063922 -111566228 + THE1B-int LTR MaLR 998 1580 0 2128 156 5 35 chr5 88063924 88064297 -111565853 + THE1B LTR MaLR 3 364 0 316 336 0 26 chr5 88064842 88064958 -111565192 + MIR3 SINE MIR 96 208 0 387 0 0 0 chr5 88065411 88065454 -111564696 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 256 139 47 0 chr5 88065454 88065497 -111564653 - MER41-int LTR ERV1 -1578 4368 4324 264 0 0 0 chr5 88065497 88065538 -111564612 - L1PA2 LINE L1 0 6155 6115 29097 39 1 3 chr5 88065638 88069487 -111560663 - L1P LINE L1 -1478 4668 700 25 51 0 0 chr5 88070336 88070375 -111559775 + AT_rich Low_complexity Low_complexity 1 39 0 14079 152 55 24 chr5 88070981 88073616 -111556534 + Tigger2 DNA MER2_type 1 2718 0 2702 22 0 6 chr5 88074852 88075165 -111554985 - AluY SINE Alu 0 311 1 210 150 0 0 chr5 88075332 88075372 -111554778 + (TC)n Simple_repeat Simple_repeat 2 41 0 220 26 26 26 chr5 88077230 88077268 -111552882 + (TTTTTA)n Simple_repeat Simple_repeat 4 41 0 290 183 14 0 chr5 88078688 88078759 -111551391 + (TATATG)n Simple_repeat Simple_repeat 2 73 0 217 141 30 61 chr5 88078767 88078866 -111551284 + (TA)n Simple_repeat Simple_repeat 2 97 0 269 115 57 25 chr5 88078883 88079005 -111551145 + (TA)n Simple_repeat Simple_repeat 2 127 0 230 164 45 18 chr5 88079076 88079186 -111550964 + (TA)n Simple_repeat Simple_repeat 1 113 0 358 127 33 44 chr5 88079203 88079384 -111550766 + (TA)n Simple_repeat Simple_repeat 2 180 0 321 200 0 0 chr5 88079454 88079519 -111550631 - MER74A LTR ERVL -197 361 297 748 240 222 13 chr5 88079577 88079802 -111550348 + AluJo SINE Alu 3 274 -38 2081 106 29 66 chr5 88079833 88080211 -111549939 - THE1B LTR MaLR 0 364 1 263 335 158 29 chr5 88081277 88081357 -111548793 + L2 LINE L2 2808 2876 -437 2165 59 4 0 chr5 88081357 88081629 -111548521 - AluY SINE Alu 0 311 39 263 335 158 29 chr5 88081629 88081966 -111548184 + L2 LINE L2 2876 3279 -34 238 206 14 41 chr5 88083393 88083466 -111546684 + L1ME2 LINE L1 3876 3946 -2200 279 140 0 0 chr5 88083468 88083518 -111546632 + (CTG)n Simple_repeat Simple_repeat 2 51 0 617 276 115 18 chr5 88083564 88084016 -111546134 + L1ME2 LINE L1 3965 4460 -1686 4354 177 44 7 chr5 88084022 88084948 -111545202 + L1PB4 LINE L1 5195 6154 -2 1919 282 62 40 chr5 88084968 88085083 -111545067 + L1ME2 LINE L1 4466 4577 -1587 1752 130 21 7 chr5 88085083 88085368 -111544782 - AluSx SINE Alu -23 289 1 1919 282 62 40 chr5 88085368 88085969 -111544181 + L1ME2 LINE L1 4577 5163 -1001 731 196 0 15 chr5 88085969 88086102 -111544048 - FLAM_C SINE Alu 0 133 3 1919 282 62 40 chr5 88086102 88086267 -111543883 + L1ME2 LINE L1 5163 5323 -841 1968 192 69 15 chr5 88086267 88086673 -111543477 + MSTA LTR MaLR 1 428 0 1919 282 62 40 chr5 88086673 88087442 -111542708 + L1ME2 LINE L1 5323 6154 -10 1581 179 82 17 chr5 88087627 88087979 -111542171 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr5 88088074 88088095 -111542055 + AT_rich Low_complexity Low_complexity 1 21 0 1724 117 39 3 chr5 88088335 88088618 -111541532 - L1MA1 LINE L1 0 6302 6010 23 68 0 0 chr5 88089128 88089172 -111540978 + AT_rich Low_complexity Low_complexity 1 44 0 290 287 107 33 chr5 88090054 88090204 -111539946 + MLT1K LTR MaLR 228 388 -200 624 225 31 6 chr5 88091240 88091400 -111538750 - L1MB7 LINE L1 -19 6663 6500 * 3202 254 65 92 chr5 88091394 88093734 -111536416 - L1MB7 LINE L1 -702 5980 3524 2728 258 97 15 chr5 88093740 88094624 -111535526 - L1MB7 LINE L1 -5585 957 1 264 308 45 15 chr5 88096137 88096270 -111533880 - MIR SINE MIR -27 235 99 228 290 94 7 chr5 88096774 88096912 -111533238 - L1MC/D LINE L1 -1893 5915 5766 228 154 0 0 chr5 88096991 88097030 -111533120 - L1MC/D LINE L1 -395 5769 5731 2000 142 0 19 chr5 88097110 88097428 -111532722 - AluSx SINE Alu 0 312 1 1596 196 21 0 chr5 88097476 88097756 -111532394 + AluSx SINE Alu 1 286 -26 578 302 74 5 chr5 88098062 88098277 -111531873 - MIR SINE MIR -24 238 9 1779 242 69 22 chr5 88098445 88098994 -111531156 + MER90 LTR ERV1 1 575 0 1010 154 12 0 chr5 88099106 88099275 -111530875 - L1PA16 LINE L1 -166 6000 5830 603 136 48 0 chr5 88099264 88099374 -111530776 + L1ME LINE L1 5722 5842 -279 * 1502 177 46 40 chr5 88099657 88100030 -111530120 - THE1C LTR MaLR 0 375 1 4577 141 23 12 chr5 88100030 88100783 -111529367 - THE1C-int LTR MaLR 0 1580 820 2751 253 5 0 chr5 88100850 88101523 -111528627 - L1P LINE L1 -2979 3167 2492 9467 189 27 8 chr5 88101544 88102056 -111528094 + L1PA13 LINE L1 3184 3685 -2478 1459 197 63 41 chr5 88102056 88102421 -111527729 + THE1C LTR MaLR 1 373 -2 9467 189 27 8 chr5 88102421 88104821 -111525329 + L1PA13 LINE L1 3685 6156 -7 26 82 0 0 chr5 88104987 88105048 -111525102 + AT_rich Low_complexity Low_complexity 1 61 0 27 0 0 0 chr5 88105431 88105458 -111524692 + AT_rich Low_complexity Low_complexity 1 27 0 1846 141 0 10 chr5 88105458 88105748 -111524402 - AluSq SINE Alu -26 287 1 290 293 73 47 chr5 88106205 88106396 -111523754 - L1ME3 LINE L1 -7 6155 5960 297 148 37 0 chr5 88106405 88106486 -111523664 + (TA)n Simple_repeat Simple_repeat 2 85 0 315 206 41 0 chr5 88106595 88106668 -111523482 - L1ME3 LINE L1 -197 5967 5892 341 204 113 63 chr5 88106928 88107070 -111523080 - MER104 DNA Tc2 -4 176 28 261 0 0 0 chr5 88107431 88107460 -111522690 + (CA)n Simple_repeat Simple_repeat 2 30 0 358 196 20 39 chr5 88108295 88108397 -111521753 - L1MC4 LINE L1 -3 8039 7940 333 0 0 0 chr5 88108397 88108434 -111521716 + (TG)n Simple_repeat Simple_repeat 2 38 0 25 0 0 0 chr5 88109809 88109834 -111520316 + AT_rich Low_complexity Low_complexity 1 25 0 281 311 59 59 chr5 88109841 88110063 -111520087 + L3 LINE CR1 626 847 -730 180 111 0 0 chr5 88110130 88110157 -111519993 + (TA)n Simple_repeat Simple_repeat 1 27 0 210 361 70 6 chr5 88110413 88110571 -111519579 + L3 LINE CR1 1156 1323 -254 237 351 18 60 chr5 88111171 88111339 -111518811 + MER5A DNA MER1_type 29 189 0 1230 208 105 6 chr5 88111690 88112003 -111518147 - MER2 DNA MER2_type 0 344 1 446 297 19 32 chr5 88112054 88112209 -111517941 - MER58A DNA MER1_type 0 153 1 485 234 55 0 chr5 88112934 88113062 -111517088 + MLT1D LTR MaLR 369 503 -2 515 278 157 67 chr5 88113107 88114124 -111516026 + L1M4 LINE L1 2166 3274 -2872 21 36 0 0 chr5 88114652 88114680 -111515470 + AT_rich Low_complexity Low_complexity 1 28 0 685 228 71 0 chr5 88114915 88115112 -111515038 - L1MEc LINE L1 -5602 1119 909 469 266 131 30 chr5 88115171 88115310 -111514840 - L1M4 LINE L1 -714 5470 5346 1989 131 0 19 chr5 88115310 88115622 -111514528 - AluSx SINE Alu -6 306 1 469 266 131 30 chr5 88115622 88115876 -111514274 - L1M4 LINE L1 -838 5346 5039 2134 116 0 10 chr5 88115893 88116203 -111513947 - AluSx SINE Alu -1 311 5 24 67 0 0 chr5 88116822 88116867 -111513283 + AT_rich Low_complexity Low_complexity 1 45 0 270 341 44 15 chr5 88118099 88118234 -111511916 - MIR SINE MIR -123 139 1 359 241 175 22 chr5 88119763 88119900 -111510250 + MIR SINE MIR 102 259 -3 283 208 78 0 chr5 88122012 88122089 -111508061 - L1MD3 LINE L1 -11 7984 7902 231 254 114 127 chr5 88122731 88122951 -111507199 - L1MEc LINE L1 -6211 329 113 27 0 0 0 chr5 88122957 88122984 -111507166 + AT_rich Low_complexity Low_complexity 1 27 0 1533 183 6 26 chr5 88123510 88123821 -111506329 + AluJb SINE Alu 1 305 -7 826 339 58 78 chr5 88124030 88124856 -111505294 - L2 LINE L2 -1703 1611 802 342 230 159 0 chr5 88124858 88124971 -111505179 + MER3 DNA MER1_type 3 133 -76 1988 252 59 41 chr5 88124994 88125827 -111504323 - L1ME1 LINE L1 -5 6161 5314 333 259 88 24 chr5 88125797 88126002 -111504148 - L1ME1 LINE L1 -1073 5073 4856 * 29035 116 13 28 chr5 88126256 88132548 -111497602 + L1PA7 LINE L1 183 6469 0 1820 161 79 8 chr5 88132518 88132898 -111497252 + L1P4 LINE L1 5590 5996 -485 * 572 211 39 64 chr5 88132903 88133059 -111497091 - MER2 DNA MER2_type -192 153 2 707 233 28 0 chr5 88133060 88133236 -111496914 + L1MA9 LINE L1 6095 6275 -37 247 284 37 0 chr5 88134127 88134208 -111495942 + GA-rich Low_complexity Low_complexity 5 88 0 16468 69 9 0 chr5 88134287 88136568 -111493582 - L1P2 LINE L1 -670 5484 3186 454 369 47 0 chr5 88136692 88136947 -111493203 - L1M4b LINE L1 -6516 343 77 15625 145 25 30 chr5 88136957 88139727 -111490423 + L1P LINE L1 11 2766 -3380 198 0 0 0 chr5 88139750 88139772 -111490378 + (TAA)n Simple_repeat Simple_repeat 2 23 0 262 278 34 91 chr5 88139786 88139848 -111490302 + MIR SINE MIR 41 105 -157 1741 177 3 0 chr5 88139848 88140157 -111489993 + AluSx SINE Alu 1 310 0 262 278 34 91 chr5 88140157 88140269 -111489881 + MIR SINE MIR 105 206 -56 275 241 13 25 chr5 88140317 88140396 -111489754 - L1M4b LINE L1 -6771 88 11 44 56 0 0 chr5 88140676 88140748 -111489402 + AT_rich Low_complexity Low_complexity 1 72 0 338 374 23 38 chr5 88140944 88141209 -111488941 + MIR SINE MIR 2 262 0 876 109 129 14 chr5 88141996 88142143 -111488007 - THE1C LTR MaLR -211 164 1 13570 192 22 12 chr5 88142143 88144182 -111485968 - L1MA2 LINE L1 -38 7685 5668 1409 217 58 28 chr5 88144182 88144546 -111485604 - THE1C LTR MaLR 0 375 1 9246 143 12 36 chr5 88144546 88146163 -111483987 - THE1C-int LTR MaLR 0 1580 3 1541 171 76 57 chr5 88146165 88146533 -111483617 - THE1C LTR MaLR 0 375 1 13570 192 22 12 chr5 88146533 88147237 -111482913 - L1MA2 LINE L1 -2055 5668 4973 360 0 0 0 chr5 88147237 88147277 -111482873 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 13570 192 22 12 chr5 88147277 88148789 -111481361 - L1MA2 LINE L1 -2750 4973 3386 261 224 0 30 chr5 88148796 88148863 -111481287 + L1M1 LINE L1 1287 1351 -6214 1395 167 8 0 chr5 88148904 88149149 -111481001 + L1M1 LINE L1 1960 2206 -5359 * 5911 218 18 14 chr5 88149146 88150405 -111479745 - L1MA2 LINE L1 -6284 1281 17 25 31 0 0 chr5 88150830 88150862 -111479288 + AT_rich Low_complexity Low_complexity 1 32 0 683 224 134 0 chr5 88151119 88151320 -111478830 + MER5C DNA MER1_type 57 284 -40 240 273 123 26 chr5 88151808 88151962 -111478188 - L1M4 LINE L1 -1347 4799 4631 24 0 0 0 chr5 88152208 88152232 -111477918 + AT_rich Low_complexity Low_complexity 1 24 0 828 222 23 0 chr5 88155475 88155646 -111474504 - MER58A DNA MER1_type -8 216 42 2196 78 0 0 chr5 88155772 88156073 -111474077 - AluY SINE Alu 0 301 1 285 333 0 0 chr5 88156148 88156241 -111473909 - MLT1-int LTR MaLR -843 528 436 872 342 63 40 chr5 88156559 88157082 -111473068 - MLT1H1 LTR MaLR -7 548 14 32 26 0 0 chr5 88157226 88157265 -111472885 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr5 88157920 88157941 -111472209 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 88158108 88158136 -111472014 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 88159513 88159535 -111470615 + AT_rich Low_complexity Low_complexity 1 22 0 501 115 0 13 chr5 88159710 88159788 -111470362 - MADE1 DNA Mariner 0 80 4 42 48 0 0 chr5 88159927 88159990 -111470160 + AT_rich Low_complexity Low_complexity 1 63 0 294 29 0 0 chr5 88161083 88161118 -111469032 + (TG)n Simple_repeat Simple_repeat 2 36 0 907 280 60 16 chr5 88161666 88162030 -111468120 - L1ME2 LINE L1 -53 6111 5732 268 316 74 37 chr5 88162034 88162224 -111467926 - Charlie2 DNA MER1_type -2504 278 82 25 0 0 0 chr5 88162884 88162909 -111467241 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 88162958 88162986 -111467164 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr5 88163302 88163344 -111466806 + AT_rich Low_complexity Low_complexity 1 42 0 1111 261 38 51 chr5 88163542 88163937 -111466213 + MLT1B LTR MaLR 1 390 0 191 361 0 0 chr5 88165593 88165654 -111464496 - L2 LINE L2 -30 3283 3223 212 383 100 36 chr5 88165768 88166316 -111463834 - L2 LINE L2 -337 2977 2395 212 310 106 9 chr5 88166466 88166579 -111463571 + MIR SINE MIR 17 140 -122 3419 33 3 0 chr5 88166585 88167100 -111463050 - L1P2 LINE L1 -673 5482 4967 300 316 103 19 chr5 88167117 88167272 -111462878 - L1MEc LINE L1 -5479 917 750 380 358 81 10 chr5 88167445 88167839 -111462311 - L1MEc LINE L1 -5915 481 60 191 361 0 0 chr5 88169566 88169627 -111460523 - L2 LINE L2 -30 3283 3223 219 368 105 47 chr5 88169743 88170294 -111459856 - L2 LINE L2 -337 2977 2395 212 310 106 9 chr5 88170447 88170560 -111459590 + MIR SINE MIR 17 140 -122 3342 21 7 0 chr5 88170566 88171056 -111459094 - L1P2 LINE L1 -673 5482 4990 3224 35 2 26 chr5 88171056 88171512 -111458638 + L1PA4 LINE L1 5727 6174 0 210 105 0 0 chr5 88172407 88172445 -111457705 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 213 305 229 34 chr5 88172726 88172988 -111457162 - L2 LINE L2 -1279 2035 1723 27 29 0 0 chr5 88173054 88173088 -111457062 + AT_rich Low_complexity Low_complexity 1 34 0 33 25 0 0 chr5 88173422 88173462 -111456688 + AT_rich Low_complexity Low_complexity 1 40 0 13594 186 27 20 chr5 88173737 88176479 -111453671 - L1MA3 LINE L1 0 7724 5002 212 0 36 0 chr5 88176479 88176507 -111453643 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 13594 186 27 20 chr5 88176507 88176576 -111453574 - L1MA3 LINE L1 -2722 5002 4935 2675 32 0 0 chr5 88176576 88176887 -111453263 - AluY SINE Alu 0 311 1 13594 186 27 20 chr5 88176887 88179283 -111450867 - L1MA3 LINE L1 -2789 4935 2101 2667 184 76 6 chr5 88179278 88179790 -111450360 - L1MA3 LINE L1 -6996 569 22 * 36 40 0 0 chr5 88181228 88181278 -111448872 + AT_rich Low_complexity Low_complexity 1 50 0 4327 178 56 19 chr5 88181278 88182451 -111447699 - L1PBa LINE L1 -3038 3824 2612 300 369 9 0 chr5 88182451 88182562 -111447588 - MIR SINE MIR -77 185 74 1608 244 55 34 chr5 88183182 88183657 -111446493 + L1MC/D LINE L1 695 1179 -5230 784 183 37 0 chr5 88183656 88183820 -111446330 + L1MA7 LINE L1 5871 6040 -251 * 649 129 38 0 chr5 88183849 88183981 -111446169 + L1MA7 LINE L1 6154 6290 -1 694 282 57 19 chr5 88184045 88184417 -111445733 + L1MC/D LINE L1 4529 4914 -1492 1880 71 4 4 chr5 88184431 88184671 -111445479 + AluSp SINE Alu 1 240 -73 27 81 0 0 chr5 88185185 88185247 -111444903 + AT_rich Low_complexity Low_complexity 1 62 0 1895 165 30 30 chr5 88187084 88187483 -111442667 - L1MA6 LINE L1 -3 6297 5899 234 352 55 20 chr5 88187686 88187885 -111442265 + L1MC/D LINE L1 5644 5849 -532 243 256 73 12 chr5 88187958 88188040 -111442110 + L1MC/D LINE L1 5953 6039 -2029 23 68 0 0 chr5 88188931 88188975 -111441175 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr5 88189170 88189198 -111440952 + AT_rich Low_complexity Low_complexity 1 28 0 858 203 0 0 chr5 88189314 88189477 -111440673 + L1PA16 LINE L1 6002 6164 -2 26 0 0 0 chr5 88189647 88189673 -111440477 + AT_rich Low_complexity Low_complexity 1 26 0 266 49 0 24 chr5 88189909 88189950 -111440200 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr5 88190472 88190500 -111439650 + AT_rich Low_complexity Low_complexity 1 28 0 755 298 118 43 chr5 88191810 88191993 -111438157 + LTR50 LTR ERVL 3 171 -624 198 0 0 0 chr5 88191993 88192015 -111438135 + (TTA)n Simple_repeat Simple_repeat 3 24 0 2336 103 0 46 chr5 88192015 88192342 -111437808 - L1PA7 LINE L1 -18 6136 5826 2352 63 3 10 chr5 88192342 88192641 -111437509 - AluY SINE Alu -14 297 1 2336 103 0 46 chr5 88192641 88192683 -111437467 - L1PA7 LINE L1 -328 5826 5784 755 298 118 43 chr5 88192683 88192937 -111437213 + LTR50 LTR ERVL 170 474 -321 1125 274 72 40 chr5 88192951 88193450 -111436700 - LTR40a LTR ERVL -2 517 3 837 230 57 90 chr5 88193452 88193884 -111436266 - HERVL40 LTR ERVL 0 5530 2715 25 31 0 0 chr5 88194084 88194116 -111436034 + AT_rich Low_complexity Low_complexity 1 32 0 421 278 68 9 chr5 88194596 88194759 -111435391 - HERVL40 LTR ERVL -673 4659 2202 799 303 47 8 chr5 88194874 88195128 -111435022 - HERVL40 LTR ERVL -1127 4403 4140 1505 287 58 21 chr5 88195203 88195976 -111434174 - HERVL40 LTR ERVL -1847 3683 2851 27 73 0 0 chr5 88196164 88196219 -111433931 + AT_rich Low_complexity Low_complexity 1 55 0 2785 100 2 2 chr5 88196303 88196703 -111433447 - L1PA11 LINE L1 -6 6168 5769 * 14858 44 10 0 chr5 88196700 88199320 -111430830 - L1PA5 LINE L1 -2 6152 3513 2593 102 5 13 chr5 88199322 88199705 -111430445 - L1PA11 LINE L1 -395 5779 5400 15384 123 33 5 chr5 88199820 88203134 -111427016 + L1PA8 LINE L1 2754 6161 -11 419 324 81 7 chr5 88203150 88203422 -111426728 + L1ME LINE L1 5511 5802 -319 186 214 34 0 chr5 88203916 88204005 -111426145 + (TA)n Simple_repeat Simple_repeat 1 92 0 305 209 0 44 chr5 88204007 88204098 -111426052 - L1MC4 LINE L1 -1342 6700 6614 302 218 26 0 chr5 88204030 88204108 -111426042 + L1MC4 LINE L1 6624 6703 -1339 * 270 206 0 0 chr5 88204108 88204171 -111425979 + (TA)n Simple_repeat Simple_repeat 2 64 0 24 32 0 0 chr5 88206182 88206213 -111423937 + AT_rich Low_complexity Low_complexity 1 31 0 358 265 68 20 chr5 88206607 88206754 -111423396 + MLT1K LTR MaLR 434 587 -1 180 312 21 54 chr5 88207395 88207488 -111422662 + L3 LINE CR1 430 519 -1058 1923 131 0 24 chr5 88207664 88207985 -111422165 + AluSq SINE Alu 1 314 0 1468 198 7 14 chr5 88208696 88208826 -111421324 + AluJb SINE Alu 7 136 -178 2214 98 3 7 chr5 88208826 88209131 -111421019 + AluY SINE Alu 1 304 -7 1468 198 7 14 chr5 88209131 88209310 -111420840 + AluJb SINE Alu 136 314 0 201 74 0 0 chr5 88209364 88209391 -111420759 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 765 214 26 7 chr5 88209392 88209546 -111420604 - FAM SINE Alu -23 162 6 182 407 57 7 chr5 88209657 88209797 -111420353 - L2 LINE L2 -474 2840 2694 22 56 0 0 chr5 88210502 88210538 -111419612 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 88210686 88210710 -111419440 + AT_rich Low_complexity Low_complexity 1 24 0 23 97 0 0 chr5 88211126 88211198 -111418952 + AT_rich Low_complexity Low_complexity 1 72 0 925 279 49 42 chr5 88211223 88211376 -111418774 - LTR38 LTR ERV1 0 556 406 2125 106 10 0 chr5 88211376 88211677 -111418473 - AluY SINE Alu -7 304 1 925 279 49 42 chr5 88211677 88211928 -111418222 - LTR38 LTR ERV1 -150 406 149 712 197 0 0 chr5 88212029 88212156 -111417994 + FLAM_C SINE Alu 5 131 -2 785 206 41 12 chr5 88212166 88212336 -111417814 + AluJb SINE Alu 92 266 -46 239 53 0 26 chr5 88212347 88212385 -111417765 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 488 124 4 9 chr5 88212604 88212687 -111417463 - MER50-int LTR ERV1 -1103 6315 5729 1796 175 16 3 chr5 88212712 88213020 -111417130 - AluJb SINE Alu 0 312 1 468 191 17 78 chr5 88213045 88213160 -111416990 - MER50-int LTR ERV1 -2283 5837 5730 * 1225 135 27 39 chr5 88213144 88213403 -111416747 + LTR49-int LTR ERV1 5504 5759 -572 2203 91 17 7 chr5 88213405 88213701 -111416449 - AluY SINE Alu -12 299 1 390 94 0 0 chr5 88213703 88213756 -111416394 - MSTA LTR MaLR -375 53 1 4469 191 35 17 chr5 88213945 88214818 -111415332 - MER4D LTR ERV1 -14 889 1 7254 152 58 68 chr5 88214819 88216180 -111413970 - MER4D-int LTR ERV1 0 6758 5413 2386 55 13 19 chr5 88216180 88216492 -111413658 + AluY SINE Alu 1 310 -1 7254 152 58 68 chr5 88216492 88216771 -111413379 - MER4D-int LTR ERV1 -1345 5413 5133 * 8523 139 6 23 chr5 88216750 88217518 -111412632 - MER4D-int LTR ERV1 -1870 4888 4151 2152 86 4 0 chr5 88217518 88217835 -111412315 - AluSp SINE Alu 0 322 5 8523 139 6 23 chr5 88217835 88218478 -111411672 - MER4D-int LTR ERV1 -2607 4151 3499 4038 159 24 14 chr5 88218478 88218737 -111411413 + MER50 LTR ERV1 1 256 -478 2086 124 10 0 chr5 88218737 88219043 -111411107 + AluSq SINE Alu 1 309 -4 4038 159 24 14 chr5 88219043 88219487 -111410663 + MER50 LTR ERV1 256 711 -23 4801 171 38 38 chr5 88219489 88220565 -111409585 - MER4D-int LTR ERV1 -3257 3501 1192 757 251 83 40 chr5 88220667 88221065 -111409085 + LTR38B LTR ERV1 177 591 -19 1001 201 39 26 chr5 88221754 88221983 -111408167 - LTR29 LTR ERV1 -1 621 390 * 1238 168 86 48 chr5 88221968 88222283 -111407867 - LTR49 LTR ERV1 -268 327 1 205 277 0 0 chr5 88222386 88222433 -111407717 + MIR3 SINE MIR 137 183 -25 2976 176 43 67 chr5 88222857 88223562 -111406588 + LTR8 LTR ERV1 2 689 -2 21 0 0 0 chr5 88224335 88224356 -111405794 + AT_rich Low_complexity Low_complexity 1 21 0 807 157 0 15 chr5 88224423 88224557 -111405593 + AluJ SINE Alu 1 132 -170 257 163 0 0 chr5 88224557 88224598 -111405552 + AluJ SINE Alu 134 174 -128 1998 217 143 28 chr5 88224598 88225247 -111404903 - MER50 LTR ERV1 0 734 11 311 172 0 0 chr5 88225253 88225311 -111404839 + AluJ SINE Alu 171 228 -74 2278 104 0 0 chr5 88226371 88226670 -111403480 - AluSx SINE Alu -13 299 1 26 0 0 0 chr5 88229271 88229297 -111400853 + AT_rich Low_complexity Low_complexity 1 26 0 692 301 66 54 chr5 88229455 88230064 -111400086 - L1MEc LINE L1 -5736 660 45 21 0 0 0 chr5 88231851 88231872 -111398278 + AT_rich Low_complexity Low_complexity 1 21 0 1201 171 5 5 chr5 88231872 88232077 -111398073 - AluJb SINE Alu -27 285 81 27 81 0 0 chr5 88232340 88232402 -111397748 + AT_rich Low_complexity Low_complexity 1 62 0 1190 99 154 6 chr5 88233152 88233334 -111396816 - AluSg SINE Alu -101 209 1 256 319 169 0 chr5 88233338 88233504 -111396646 - MIR SINE MIR -56 206 13 1855 336 64 22 chr5 88233864 88234062 -111396088 - L2 LINE L2 -1318 1996 1808 189 0 0 0 chr5 88234062 88234083 -111396067 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1855 336 64 22 chr5 88234083 88234717 -111395433 - L2 LINE L2 -1506 1808 1129 417 233 63 25 chr5 88234794 88234953 -111395197 - MIR SINE MIR -34 228 64 521 325 12 0 chr5 88235352 88235512 -111394638 + L2 LINE L2 2061 2222 -1092 471 340 14 19 chr5 88235698 88235910 -111394240 - MLT1I LTR MaLR -196 213 3 714 291 102 59 chr5 88235913 88235974 -111394176 + L2 LINE L2 2213 2270 -1044 1973 115 3 48 chr5 88235974 88236286 -111393864 - AluSx SINE Alu -12 300 3 714 291 102 59 chr5 88236286 88236598 -111393552 + L2 LINE L2 2270 2602 -712 2691 106 46 28 chr5 88236803 88237210 -111392940 - L1P4 LINE L1 -403 5762 5345 1840 160 7 7 chr5 88237210 88237522 -111392628 + AluSg SINE Alu 2 310 0 2691 106 46 28 chr5 88237522 88237550 -111392600 - L1P4 LINE L1 -820 5345 5319 2363 132 19 3 chr5 88237550 88237921 -111392229 + L1PA15 LINE L1 5788 6165 0 292 290 50 10 chr5 88237939 88238039 -111392111 + L2 LINE L2 2857 2960 -353 1145 219 8 16 chr5 88238040 88238296 -111391854 + L1MD3 LINE L1 7415 7668 -327 22 0 0 0 chr5 88238369 88238391 -111391759 + AT_rich Low_complexity Low_complexity 1 22 0 226 312 138 64 chr5 88238799 88239017 -111391133 - L2 LINE L2 -2032 1282 1049 1812 116 16 0 chr5 88239363 88239613 -111390537 + AluSg SINE Alu 43 296 -14 2008 211 15 25 chr5 88239629 88240037 -111390113 - MSTB LTR MaLR -8 418 15 1337 180 93 13 chr5 88240039 88240350 -111389800 + MER44D DNA MER2_type 2 607 -2 182 350 75 33 chr5 88242014 88242134 -111388016 + MIR SINE MIR 20 144 -118 1673 195 32 85 chr5 88242305 88242518 -111387632 + MLT1C LTR MaLR 1 224 -243 2267 91 0 3 chr5 88242518 88242816 -111387334 + AluSg SINE Alu 2 298 -12 1673 195 32 85 chr5 88242816 88243095 -111387055 + MLT1C LTR MaLR 224 467 0 364 159 43 0 chr5 88243610 88243679 -111386471 - MIR SINE MIR -1 261 190 297 294 55 43 chr5 88244255 88244418 -111385732 + MIR3 SINE MIR 44 208 0 34 42 0 0 chr5 88245183 88245231 -111384919 + AT_rich Low_complexity Low_complexity 1 48 0 1820 132 0 37 chr5 88245284 88245580 -111384570 + AluSq SINE Alu 1 285 -28 460 313 105 81 chr5 88245588 88245871 -111384279 - L1MEd LINE L1 -4862 1257 982 2441 181 34 11 chr5 88245871 88246397 -111383753 - MER34 LTR ERV1 0 542 5 460 313 105 81 chr5 88246397 88246742 -111383408 - L1MEd LINE L1 -5137 982 614 254 313 0 0 chr5 88246820 88246884 -111383266 - L1MEd LINE L1 -5616 503 440 3297 199 68 17 chr5 88246975 88247852 -111382298 - L1MB4 LINE L1 -1 6179 5258 1069 235 70 83 chr5 88247856 88248668 -111381482 - LTR1B LTR ERV1 0 1020 130 437 127 0 0 chr5 88248667 88248730 -111381420 - Tigger4(Zombi) DNA MER2_type -2668 63 1 * 276 175 0 35 chr5 88248730 88248786 -111381364 - MLT1A1 LTR MaLR -311 54 1 3405 237 53 23 chr5 88248786 88250396 -111379754 - L1M4c LINE L1 -3921 2725 983 241 273 30 10 chr5 88250425 88250524 -111379626 - L1M4c LINE L1 -5622 920 820 552 334 55 60 chr5 88250641 88251329 -111378821 - L1M4c LINE L1 -5844 698 14 351 113 0 0 chr5 88251548 88251601 -111378549 + (TG)n Simple_repeat Simple_repeat 2 54 0 258 116 0 0 chr5 88251606 88251649 -111378501 + (TCTCTG)n Simple_repeat Simple_repeat 4 46 0 2189 112 0 10 chr5 88251876 88252189 -111377961 - AluSx SINE Alu -2 310 1 533 97 9 12 chr5 88252557 88252784 -111377366 - AluSc SINE Alu -16 293 1 23 33 0 0 chr5 88252943 88252973 -111377177 + AT_rich Low_complexity Low_complexity 1 30 0 234 294 43 0 chr5 88253516 88253608 -111376542 - MLT1H LTR MaLR 0 549 454 1781 188 139 5 chr5 88253612 88253985 -111376165 - MSTA LTR MaLR -5 423 1 8026 198 27 9 chr5 88253985 88255606 -111374544 - MSTA-int LTR MaLR 0 1651 1 1907 150 120 30 chr5 88255606 88255999 -111374151 - MSTA LTR MaLR 0 428 1 401 279 108 58 chr5 88256094 88256390 -111373760 - MLT1H LTR MaLR -116 293 1 308 218 116 20 chr5 88258477 88258624 -111371526 + L1M4 LINE L1 2147 2307 -3839 698 240 81 4 chr5 88258630 88258888 -111371262 - Charlie1 DNA MER1_type 0 2761 2484 21 0 0 0 chr5 88258903 88258924 -111371226 + AT_rich Low_complexity Low_complexity 1 21 0 528 329 14 40 chr5 88259607 88259829 -111370321 + MIR SINE MIR 47 262 0 450 141 32 17 chr5 88260705 88260989 -111369161 + (TATAA)n Simple_repeat Simple_repeat 1 288 0 522 62 94 0 chr5 88260989 88261149 -111369001 + (TA)n Simple_repeat Simple_repeat 2 176 0 2729 178 39 2 chr5 88261152 88261686 -111368464 - Tigger1 DNA MER2_type -276 2142 1589 5480 118 33 10 chr5 88261687 88262655 -111367495 + L1PA14 LINE L1 5173 6160 -1 1179 164 5 0 chr5 88262666 88262861 -111367289 - Tigger1 DNA MER2_type -1171 1247 1052 * 1286 171 32 0 chr5 88262858 88263109 -111367041 - Tigger1 DNA MER2_type -1761 657 399 2221 177 20 7 chr5 88263521 88263927 -111366223 - Tigger1 DNA MER2_type -2005 413 3 22 56 0 0 chr5 88264086 88264122 -111366028 + AT_rich Low_complexity Low_complexity 1 36 0 3814 151 11 0 chr5 88264134 88264764 -111365386 - L1PA16 LINE L1 -16 6150 5514 1182 225 8 48 chr5 88264766 88264889 -111365261 - L1P LINE L1 -2939 3207 3081 2251 104 0 3 chr5 88264889 88265197 -111364953 - AluSc SINE Alu -2 307 1 1182 225 8 48 chr5 88265197 88265428 -111364722 - L1P LINE L1 -3065 3081 2867 25 0 0 0 chr5 88265448 88265473 -111364677 + AT_rich Low_complexity Low_complexity 1 25 0 289 219 96 0 chr5 88265483 88265556 -111364594 + MIR SINE MIR 125 204 -58 249 267 44 0 chr5 88265706 88265796 -111364354 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 2425 154 18 23 chr5 88266226 88266662 -111363488 + Tigger2a DNA MER2_type 1 434 0 495 167 110 10 chr5 88266694 88266814 -111363336 + MLT1E3 LTR MaLR 80 204 -420 670 258 122 61 chr5 88266961 88267875 -111362275 + L1MCc LINE L1 1226 2418 -4564 27 29 0 0 chr5 88267886 88267920 -111362230 + AT_rich Low_complexity Low_complexity 1 34 0 299 246 138 36 chr5 88268180 88268318 -111361832 - LTR50 LTR ERVL -119 676 525 6093 138 17 12 chr5 88268318 88269400 -111360750 + L1MA3 LINE L1 5219 6305 0 1248 248 91 22 chr5 88269528 88269935 -111360215 - LTR68 LTR ERV1 -5 735 301 711 262 84 23 chr5 88270071 88270244 -111359906 - LTR68 LTR ERV1 -461 279 83 1655 218 11 16 chr5 88270244 88270611 -111359539 + MLT1A1 LTR MaLR 1 365 0 711 262 84 23 chr5 88270611 88270700 -111359450 - LTR68 LTR ERV1 -657 83 1 822 251 89 37 chr5 88270752 88270955 -111359195 - LTR50 LTR ERVL -452 343 115 762 86 94 8 chr5 88270955 88271083 -111359067 - MER85 DNA T2_type 0 139 1 822 251 89 37 chr5 88271083 88271205 -111358945 - LTR50 LTR ERVL -680 115 1 24 32 0 0 chr5 88271329 88271360 -111358790 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr5 88271459 88271489 -111358661 + AT_rich Low_complexity Low_complexity 1 30 0 2212 63 0 54 chr5 88271981 88272296 -111357854 - AluY SINE Alu -13 298 1 571 271 108 20 chr5 88272426 88272721 -111357429 - LTR52 LTR ERVL -100 321 1 24 0 0 0 chr5 88273139 88273163 -111356987 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr5 88273177 88273204 -111356946 + AT_rich Low_complexity Low_complexity 1 27 0 224 302 203 22 chr5 88273825 88274057 -111356093 - L2 LINE L2 -816 2498 2225 1719 204 51 6 chr5 88274135 88274487 -111355663 + L1MCa LINE L1 22 389 -6037 329 254 45 9 chr5 88274488 88274598 -111355552 + LTR33 LTR ERVL 394 507 -14 21 0 0 0 chr5 88275300 88275321 -111354829 + AT_rich Low_complexity Low_complexity 1 21 0 833 379 48 14 chr5 88275754 88276398 -111353752 + HERVL LTR ERVL 1619 2284 -3480 461 396 18 0 chr5 88276425 88276698 -111353452 + HERVL LTR ERVL 2472 2749 -3015 1495 304 49 41 chr5 88276716 88277304 -111352846 - MLT2F LTR ERVL -70 593 1 1133 349 87 8 chr5 88277309 88277943 -111352207 + HERVL LTR ERVL 3177 3860 -1904 645 373 7 7 chr5 88277952 88278231 -111351919 + HERVL LTR ERVL 3961 4239 -1525 324 334 44 23 chr5 88278265 88278498 -111351652 + HERVL LTR ERVL 4281 4569 -1195 889 223 42 132 chr5 88278498 88278907 -111351243 - MLT1A2 LTR MaLR -2 372 1 324 334 44 23 chr5 88278907 88279032 -111351118 + HERVL LTR ERVL 4569 4690 -1074 26 0 0 0 chr5 88279093 88279119 -111351031 + AT_rich Low_complexity Low_complexity 1 26 0 465 19 0 0 chr5 88279237 88279291 -111350859 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 238 174 29 58 chr5 88280582 88280651 -111349499 + T-rich Low_complexity Low_complexity 3 69 0 23 33 0 0 chr5 88280872 88280902 -111349248 + AT_rich Low_complexity Low_complexity 1 30 0 2058 106 35 0 chr5 88281054 88281338 -111348812 - AluSg SINE Alu -16 294 1 2341 114 5 8 chr5 88281607 88281985 -111348165 - L1PB1 LINE L1 -2 6149 5773 21 0 0 0 chr5 88281985 88282006 -111348144 + AT_rich Low_complexity Low_complexity 1 21 0 11316 197 31 6 chr5 88282018 88282033 -111348117 - L1PB1 LINE L1 -358 5793 5780 431 15 59 0 chr5 88282033 88282101 -111348049 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 11316 197 31 6 chr5 88282101 88285187 -111344963 - L1PB1 LINE L1 -371 5780 2611 197 393 29 58 chr5 88286003 88286176 -111343974 + L2 LINE L2 3097 3264 -8 959 186 21 5 chr5 88287842 88288030 -111342120 + AluJo SINE Alu 89 279 -33 26 64 0 0 chr5 88288251 88288298 -111341852 + AT_rich Low_complexity Low_complexity 1 47 0 233 372 85 0 chr5 88288327 88288421 -111341729 - L2 LINE L2 -34 3279 3178 26 98 0 0 chr5 88288486 88288568 -111341582 + AT_rich Low_complexity Low_complexity 1 82 0 25 0 0 0 chr5 88288632 88288657 -111341493 + AT_rich Low_complexity Low_complexity 1 25 0 189 147 0 0 chr5 88290047 88290081 -111340069 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 681 98 41 0 chr5 88290111 88290234 -111339916 + CT-rich Low_complexity Low_complexity 4 131 0 215 268 10 0 chr5 88290924 88291021 -111339129 + (TA)n Simple_repeat Simple_repeat 1 98 0 186 209 0 0 chr5 88292298 88292341 -111337809 + (TA)n Simple_repeat Simple_repeat 2 44 0 228 86 0 0 chr5 88292991 88293026 -111337124 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1006 367 77 18 chr5 88293253 88294512 -111335638 + MERVL LTR ERVL 1867 3208 -2277 1538 216 21 13 chr5 88294618 88294943 -111335207 + MLT1A1 LTR MaLR 23 365 0 297 339 68 31 chr5 88295003 88295195 -111334955 + MERVL LTR ERVL 3580 3778 -1876 275 304 52 17 chr5 88296216 88296331 -111333819 - MIR3 SINE MIR -14 194 76 391 271 36 0 chr5 88296332 88296472 -111333678 + MER103 DNA DNA 7 151 -15 451 221 44 9 chr5 88296692 88296805 -111333345 + L1M1 LINE L1 18 134 -7431 * 9025 173 32 3 chr5 88296803 88298351 -111331799 + L1M1 LINE L1 793 2384 -5181 493 348 153 35 chr5 88299574 88300117 -111330033 + L2 LINE L2 1835 2441 -873 499 204 10 0 chr5 88300162 88300265 -111329885 + MLT1D LTR MaLR 402 505 0 1413 207 113 9 chr5 88300649 88300978 -111329172 - MLT1A1 LTR MaLR 0 365 3 420 316 52 43 chr5 88301075 88301306 -111328844 + MIR SINE MIR 30 262 0 1000 240 20 55 chr5 88302469 88302723 -111327427 - MLT1A1 LTR MaLR 0 365 121 704 269 34 10 chr5 88302714 88303030 -111327120 - MLT1A1 LTR MaLR -4 361 2 * 516 193 23 40 chr5 88303030 88303154 -111326996 - MLT1A1 LTR MaLR -232 133 1 372 354 42 29 chr5 88303241 88303609 -111326541 - LTR16C LTR ERVL 0 491 89 313 352 59 44 chr5 88304248 88304654 -111325496 - L1M4 LINE L1 -2324 3822 3411 21 0 0 0 chr5 88304790 88304811 -111325339 + AT_rich Low_complexity Low_complexity 1 21 0 1315 194 84 15 chr5 88305164 88305524 -111324626 - MER67C LTR ERV1 -242 272 16 330 320 52 79 chr5 88307679 88308045 -111322105 - L1M4 LINE L1 -3622 2524 2169 220 299 149 0 chr5 88308239 88308326 -111321824 - L2 LINE L2 -24 3289 3190 293 262 33 74 chr5 88308661 88308783 -111321367 + MER21B LTR ERV1 567 683 -180 589 232 12 172 chr5 88308813 88309132 -111321018 + MLT1A1 LTR MaLR 3 270 -95 2105 96 0 7 chr5 88309246 88309527 -111320623 - AluSg SINE Alu -31 279 1 362 302 120 44 chr5 88309529 88309754 -111320396 - L1ME3A LINE L1 -297 5873 5632 252 273 55 36 chr5 88309762 88309872 -111320278 - L1ME3A LINE L1 -580 5582 5471 455 268 83 57 chr5 88309948 88310213 -111319937 - L1ME3A LINE L1 -763 5383 5112 22 0 0 0 chr5 88312473 88312495 -111317655 + AT_rich Low_complexity Low_complexity 1 22 0 351 292 153 51 chr5 88313034 88313506 -111316644 - L1MC/D LINE L1 -1991 5817 5298 29 47 0 0 chr5 88313737 88313780 -111316370 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr5 88314233 88314262 -111315888 + AT_rich Low_complexity Low_complexity 1 29 0 847 53 0 68 chr5 88316054 88316186 -111313964 - AluSq/x SINE Alu -182 130 8 534 284 32 27 chr5 88316196 88316569 -111313581 + L1M4 LINE L1 2790 3164 -2982 215 200 0 0 chr5 88316676 88316711 -111313439 + MER5A DNA MER1_type 132 166 -23 592 252 28 8 chr5 88317775 88318300 -111311850 - L1M4 LINE L1 -708 5476 4827 525 287 24 12 chr5 88318301 88318465 -111311685 - L1M4 LINE L1 -1994 4152 3987 1479 152 4 0 chr5 88318473 88318703 -111311447 + THE1B LTR MaLR 3 233 -131 194 191 0 15 chr5 88318852 88318920 -111311230 + CT-rich Low_complexity Low_complexity 2 68 0 3814 71 0 22 chr5 88319150 88319686 -111310464 - L1PA4 LINE L1 -141 6014 5491 1295 192 22 32 chr5 88319693 88320006 -111310144 - AluJo SINE Alu -2 310 1 280 326 67 34 chr5 88320211 88320389 -111309761 + MER89-int LTR ERV1 6305 6488 -313 1163 153 26 22 chr5 88320637 88320866 -111309284 + L1MA8 LINE L1 6056 6285 -6 1754 116 8 8 chr5 88320981 88321240 -111308910 + AluSg SINE Alu 37 295 -15 2162 110 10 7 chr5 88323206 88323516 -111306634 + AluSx SINE Alu 2 312 0 252 188 0 47 chr5 88324903 88324967 -111305183 + L1MA2 LINE L1 6244 6304 0 203 200 0 0 chr5 88325697 88325732 -111304418 + (TA)n Simple_repeat Simple_repeat 1 35 0 555 73 0 24 chr5 88327389 88327504 -111302646 - L1PA6 LINE L1 0 6154 6069 1286 242 33 22 chr5 88327526 88327696 -111302454 + MLT1A2 LTR MaLR 1 168 -206 267 31 0 0 chr5 88327696 88327728 -111302422 + (TC)n Simple_repeat Simple_repeat 1 32 0 1286 242 33 22 chr5 88327728 88327925 -111302225 + MLT1A2 LTR MaLR 168 372 -2 2304 174 17 9 chr5 88328228 88328688 -111301462 + L1MA3 LINE L1 5767 6230 -75 257 303 20 10 chr5 88329100 88329199 -111300951 + MLT1J LTR MaLR 406 505 -6 180 0 0 0 chr5 88329804 88329824 -111300326 + (A)n Simple_repeat Simple_repeat 1 20 0 1702 185 0 7 chr5 88329828 88330131 -111300019 + AluJb SINE Alu 1 301 -11 270 0 0 0 chr5 88330207 88330237 -111299913 + (TTA)n Simple_repeat Simple_repeat 2 31 0 270 56 0 0 chr5 88330773 88330793 -111299357 + (TG)n Simple_repeat Simple_repeat 1 56 0 270 56 0 0 chr5 88330793 88330829 -111299321 + (TG)n Simple_repeat Simple_repeat 1 36 0 208 355 13 0 chr5 88332396 88332472 -111297678 + MIR3 SINE MIR 125 201 -7 1148 230 112 20 chr5 88333334 88333638 -111296512 + MER44D DNA MER2_type 1 602 -7 240 94 0 172 chr5 88334815 88334845 -111295305 - MLT2B3 LTR ERVL 0 520 505 1545 175 61 19 chr5 88334845 88335205 -111294945 + THE1C LTR MaLR 1 375 0 240 94 0 172 chr5 88335205 88335238 -111294912 - MLT2B3 LTR ERVL -15 505 468 215 102 34 34 chr5 88335238 88335297 -111294853 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 2398 220 30 18 chr5 88335297 88335806 -111294344 - MLT2B3 LTR ERVL -39 515 1 35 63 0 0 chr5 88335842 88335905 -111294245 + AT_rich Low_complexity Low_complexity 1 63 0 911 267 77 34 chr5 88336268 88336642 -111293508 + MER110A LTR ERV1 40 429 -39 960 273 105 24 chr5 88336642 88337012 -111293138 - MER57B LTR ERV1 -1 433 34 541 241 116 20 chr5 88337846 88338045 -111292105 + L1ME2 LINE L1 5931 6148 -16 194 321 73 18 chr5 88339957 88340066 -111290084 + L2 LINE L2 3199 3313 0 5141 208 29 8 chr5 88340726 88341782 -111288368 + L1M1 LINE L1 7 1085 -6480 255 371 48 8 chr5 88341784 88341908 -111288242 - MER5A DNA MER1_type -1 188 60 33 0 0 0 chr5 88342650 88342683 -111287467 + AT_rich Low_complexity Low_complexity 1 33 0 212 0 36 0 chr5 88343642 88343670 -111286480 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4990 212 25 7 chr5 88343671 88345063 -111285087 + L1PA15-16 LINE L1 10 1654 -5195 211 133 96 12 chr5 88345085 88345251 -111284899 + (TA)n Simple_repeat Simple_repeat 1 180 0 254 75 96 11 chr5 88345309 88345403 -111284747 + (TA)n Simple_repeat Simple_repeat 1 102 0 51 17 0 0 chr5 88345539 88345597 -111284553 + AT_rich Low_complexity Low_complexity 1 58 0 213 211 42 0 chr5 88345597 88345668 -111284482 + (TA)n Simple_repeat Simple_repeat 1 74 0 7312 193 9 24 chr5 88345689 88346953 -111283197 + L1PA15-16 LINE L1 1666 2896 -3953 2180 112 3 10 chr5 88346953 88347257 -111282893 + AluSp SINE Alu 3 304 -9 7312 193 9 24 chr5 88347257 88347877 -111282273 + L1PA15-16 LINE L1 2896 3524 -3325 3518 237 37 34 chr5 88347980 88349032 -111281118 + L1 LINE L1 3903 4957 -1892 2920 234 99 36 chr5 88349033 88350138 -111280012 - L1M4c LINE L1 -4502 2144 971 235 288 97 108 chr5 88350286 88350700 -111279450 - L1M4c LINE L1 -5766 776 372 1631 194 3 10 chr5 88350700 88351010 -111279140 - AluJb SINE Alu -4 308 1 235 288 97 108 chr5 88351010 88351376 -111278774 - L1M4c LINE L1 -6170 372 4 25 83 0 0 chr5 88352157 88352217 -111277933 + AT_rich Low_complexity Low_complexity 1 60 0 198 0 0 0 chr5 88353227 88353249 -111276901 + (TG)n Simple_repeat Simple_repeat 1 22 0 2051 183 51 47 chr5 88353567 88354059 -111276091 - LTR1 LTR ERV1 -291 494 1 24 53 0 0 chr5 88354127 88354165 -111275985 + AT_rich Low_complexity Low_complexity 1 38 0 6207 243 29 54 chr5 88354296 88357981 -111272169 + L1PA12 LINE L1 1 4120 -3464 526 238 19 0 chr5 88358235 88358395 -111271755 - L1M4 LINE L1 -2091 4553 4391 1226 256 35 22 chr5 88358427 88359022 -111271128 - L1M4 LINE L1 -2689 3955 3353 382 270 0 18 chr5 88359005 88359116 -111271034 - L1M4 LINE L1 -6420 122 14 * 28 61 0 0 chr5 88359404 88359453 -111270697 + AT_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr5 88359755 88359780 -111270370 + AT_rich Low_complexity Low_complexity 1 25 0 2182 55 0 4 chr5 88360795 88361066 -111269084 + AluY SINE Alu 39 308 -3 414 257 162 26 chr5 88361474 88361739 -111268411 + L1ME3A LINE L1 2647 2947 -3199 1045 316 56 21 chr5 88362032 88362786 -111267364 + L1ME3A LINE L1 5166 5955 -215 645 251 75 6 chr5 88362856 88363134 -111267016 - L1M4 LINE L1 -1299 4847 4535 358 237 0 0 chr5 88363335 88363411 -111266739 + HAL1 LINE L1 1562 1637 -870 450 208 30 0 chr5 88363933 88364034 -111266116 + L1MC2 LINE L1 6240 6343 -1 283 303 26 13 chr5 88364040 88364192 -111265958 + L1M4 LINE L1 2511 2664 -3482 1133 259 48 23 chr5 88414412 88414849 -111215301 + L1ME LINE L1 388 835 -5235 2100 176 52 28 chr5 88414993 88415493 -111214657 + L1 LINE L1 4847 5358 -788 6235 101 13 6 chr5 88415503 88416975 -111213175 + L1PA8 LINE L1 4692 6170 -2 29 0 0 0 chr5 88419353 88419382 -111210768 + AT_rich Low_complexity Low_complexity 1 29 0 1584 159 66 24 chr5 88419596 88419885 -111210265 + AluJb SINE Alu 1 301 -11 337 286 26 32 chr5 88421384 88421538 -111208612 + LTR16C LTR ERVL 339 491 0 2234 90 0 6 chr5 88421838 88422149 -111208001 - AluY SINE Alu -2 309 1 218 295 213 16 chr5 88422621 88422743 -111207407 + L2 LINE L2 3168 3313 0 188 0 74 0 chr5 88424684 88424711 -111205439 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 336 190 0 0 chr5 88425071 88425150 -111205000 + (TA)n Simple_repeat Simple_repeat 1 79 0 210 71 0 0 chr5 88425151 88425179 -111204971 + (GA)n Simple_repeat Simple_repeat 1 28 0 27 29 0 0 chr5 88426019 88426053 -111204097 + AT_rich Low_complexity Low_complexity 1 34 0 2331 47 0 20 chr5 88426542 88426843 -111203307 + AluY SINE Alu 1 295 -16 25 31 0 0 chr5 88426976 88427008 -111203142 + AT_rich Low_complexity Low_complexity 1 32 0 26 82 0 0 chr5 88427289 88427350 -111202800 + AT_rich Low_complexity Low_complexity 1 61 0 204 40 0 0 chr5 88428322 88428347 -111201803 + (CA)n Simple_repeat Simple_repeat 2 26 0 985 0 0 0 chr5 88428922 88429043 -111201107 - L1P LINE L1 -771 5384 5264 6499 26 1 0 chr5 88429043 88429808 -111200342 + L1PA3 LINE L1 5390 6155 0 39 0 0 0 chr5 88429808 88429847 -111200303 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr5 88430382 88430419 -111199731 + AT_rich Low_complexity Low_complexity 1 37 0 338 313 156 33 chr5 88431845 88432056 -111198094 - MIR SINE MIR -25 237 1 27 92 0 0 chr5 88432528 88432604 -111197546 + AT_rich Low_complexity Low_complexity 1 76 0 1624 184 58 64 chr5 88433018 88433453 -111196697 + MSTB1 LTR MaLR 1 432 0 348 331 121 16 chr5 88433750 88433998 -111196152 + L2 LINE L2 2628 2901 -413 1189 251 15 96 chr5 88434011 88434264 -111195886 - L1MEc LINE L1 -3345 3081 2809 240 35 0 0 chr5 88434264 88434293 -111195857 - Alu SINE Alu -14 287 259 1189 251 15 96 chr5 88434293 88434538 -111195612 - L1MEc LINE L1 -3617 2809 2632 2256 78 0 34 chr5 88434538 88434858 -111195292 - AluY SINE Alu -2 309 1 1189 251 15 96 chr5 88434858 88435113 -111195037 - L1MEc LINE L1 -3794 2632 2358 694 171 17 0 chr5 88435116 88435233 -111194917 - AluSg/x SINE Alu -18 294 176 389 206 0 0 chr5 88435258 88435350 -111194800 - L1MEc LINE L1 -4089 2337 2246 240 154 49 0 chr5 88435428 88435551 -111194599 + (TA)n Simple_repeat Simple_repeat 1 129 0 712 40 34 46 chr5 88435562 88435737 -111194413 + (TA)n Simple_repeat Simple_repeat 2 174 0 1001 297 76 26 chr5 88435737 88436475 -111193675 - L1MEc LINE L1 -4231 2240 1470 997 247 31 17 chr5 88436485 88436776 -111193374 - L1MEc LINE L1 -6130 296 2 1681 130 86 53 chr5 88436792 88437153 -111192997 + THE1C LTR MaLR 2 374 -1 25 0 0 0 chr5 88438235 88438260 -111191890 + AT_rich Low_complexity Low_complexity 1 25 0 273 75 0 0 chr5 88439056 88439096 -111191054 + (GTTTG)n Simple_repeat Simple_repeat 5 44 0 539 301 0 0 chr5 88439648 88439791 -111190359 + MLT1F LTR MaLR 10 152 -390 198 367 42 17 chr5 88439996 88440116 -111190034 - L2 LINE L2 -8 3305 3183 13228 85 5 6 chr5 88440167 88442813 -111187337 + L1PA6 LINE L1 3480 6143 -11 820 335 148 34 chr5 88442873 88444265 -111185885 + L2 LINE L2 1744 3312 -1 248 325 35 79 chr5 88444523 88444726 -111185424 + MIR SINE MIR 35 228 -34 277 329 81 0 chr5 88445214 88445363 -111184787 + MIR SINE MIR 102 262 0 21 0 0 0 chr5 88446773 88446794 -111183356 + AT_rich Low_complexity Low_complexity 1 21 0 761 278 132 39 chr5 88446991 88447430 -111182720 - MLT1H1 LTR MaLR -2 553 74 1948 97 35 0 chr5 88447433 88447723 -111182427 + L1MA3 LINE L1 5549 5848 -457 253 282 14 0 chr5 88447723 88447794 -111182356 - MLT1H1 LTR MaLR -483 72 1 327 171 11 23 chr5 88447998 88448086 -111182064 + GA-rich Low_complexity Low_complexity 1 87 0 2066 131 3 0 chr5 88449131 88449436 -111180714 - AluSx SINE Alu -6 306 1 21 0 0 0 chr5 88449436 88449457 -111180693 + AT_rich Low_complexity Low_complexity 1 21 0 448 265 0 0 chr5 88450229 88450331 -111179819 - L1PA16 LINE L1 -24 6142 6041 510 17 0 0 chr5 88451597 88451656 -111178494 + (TG)n Simple_repeat Simple_repeat 2 60 0 292 339 31 8 chr5 88451870 88451997 -111178153 + L3 LINE CR1 714 843 -734 188 416 0 0 chr5 88452434 88452523 -111177627 + L2 LINE L2 3225 3313 0 1823 194 156 2 chr5 88453758 88454187 -111175963 - LTR44 LTR ERV1 0 519 25 183 307 27 13 chr5 88454310 88454385 -111175765 - L2 LINE L2 -544 2770 2695 219 69 0 0 chr5 88455286 88455315 -111174835 + (TG)n Simple_repeat Simple_repeat 2 30 0 200 366 40 20 chr5 88456886 88456987 -111173163 + MIR3 SINE MIR 76 178 -30 27987 96 11 10 chr5 88457596 88460077 -111170073 - L1PA7 LINE L1 -8 6461 3983 288 0 0 0 chr5 88460077 88460109 -111170041 + (TA)n Simple_repeat Simple_repeat 2 33 0 * 567 0 0 0 chr5 88460108 88460171 -111169979 + (TG)n Simple_repeat Simple_repeat 2 64 0 27987 96 11 10 chr5 88460109 88462619 -111167531 - L1PA7 LINE L1 -2486 3983 1532 550 87 98 11 chr5 88462631 88462723 -111167427 - L1PA7 LINE L1 -5608 853 754 2130 114 3 25 chr5 88462773 88463090 -111167060 + AluY SINE Alu 1 310 -1 22 35 0 0 chr5 88463185 88463214 -111166936 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr5 88463585 88463614 -111166536 + AT_rich Low_complexity Low_complexity 1 29 0 271 334 179 45 chr5 88464300 88464680 -111165470 + L2 LINE L2 2882 3312 -1 24 103 0 0 chr5 88465654 88465741 -111164409 + AT_rich Low_complexity Low_complexity 1 87 0 305 250 83 35 chr5 88465803 88465947 -111164203 - HAL1 LINE L1 -107 2400 2250 22 56 0 0 chr5 88465981 88466017 -111164133 + AT_rich Low_complexity Low_complexity 1 36 0 253 297 52 32 chr5 88466798 88466953 -111163197 - HAL1 LINE L1 -853 1654 1497 2229 166 14 22 chr5 88469682 88470127 -111160023 + HSMAR2 DNA Mariner 855 1295 -7 311 332 48 65 chr5 88470200 88470429 -111159721 - HAL1 LINE L1 -2281 226 2 33 25 0 0 chr5 88470450 88470490 -111159660 + AT_rich Low_complexity Low_complexity 1 40 0 182 345 67 42 chr5 88472632 88472751 -111157399 + L2 LINE L2 3138 3259 -13 186 43 0 0 chr5 88472759 88472782 -111157368 + (TGGA)n Simple_repeat Simple_repeat 4 26 0 447 304 51 101 chr5 88475192 88475587 -111154563 - MLT1I LTR MaLR -14 395 21 2511 207 35 27 chr5 88475656 88476285 -111153865 - LTR27 LTR ERV1 0 636 3 195 267 133 15 chr5 88476285 88476420 -111153730 - MIR SINE MIR -26 236 86 2548 32 0 22 chr5 88476803 88477114 -111153036 + AluY SINE Alu 1 304 -7 23 54 0 0 chr5 88477181 88477218 -111152932 + AT_rich Low_complexity Low_complexity 1 37 0 34 42 0 0 chr5 88477272 88477320 -111152830 + AT_rich Low_complexity Low_complexity 1 48 0 26 30 0 0 chr5 88477366 88477399 -111152751 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 88477466 88477487 -111152663 + AT_rich Low_complexity Low_complexity 1 21 0 400 270 137 37 chr5 88477529 88477799 -111152351 - L1ME3A LINE L1 -264 5906 5610 1930 179 16 3 chr5 88477955 88478336 -111151814 + L1MC1 LINE L1 5947 6332 -1 234 128 0 0 chr5 88479025 88479064 -111151086 + (TG)n Simple_repeat Simple_repeat 2 40 0 207 0 0 0 chr5 88481176 88481199 -111148951 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1895 124 0 0 chr5 88481202 88481459 -111148691 - AluSx SINE Alu -23 289 33 2113 186 221 58 chr5 88481644 88482462 -111147688 + LTR28 LTR ERV1 1 1019 -1 1430 256 31 79 chr5 88482498 88483374 -111146776 - L1MC5 LINE L1 -433 7528 6695 1340 191 66 0 chr5 88483497 88483754 -111146396 - AluSx SINE Alu -9 303 30 1021 246 99 8 chr5 88483792 88484186 -111145964 + L1M4 LINE L1 3942 4371 -1775 * 2915 246 62 75 chr5 88484179 88484753 -111145397 + L1MC3 LINE L1 5919 6499 -1286 2013 123 3 10 chr5 88484753 88485054 -111145096 + AluSx SINE Alu 1 299 -13 2915 246 62 75 chr5 88485054 88485731 -111144419 + L1MC3 LINE L1 6499 7153 -632 971 235 12 24 chr5 88485741 88485992 -111144158 + L1ME2 LINE L1 5828 6075 -89 300 53 0 0 chr5 88485994 88486032 -111144118 + (TA)n Simple_repeat Simple_repeat 2 39 0 799 211 61 24 chr5 88486052 88486299 -111143851 - L1MD3 LINE L1 -878 7117 6862 275 127 16 0 chr5 88486377 88486440 -111143710 + (TA)n Simple_repeat Simple_repeat 1 64 0 22 70 0 0 chr5 88487230 88487273 -111142877 + AT_rich Low_complexity Low_complexity 1 43 0 1837 167 22 40 chr5 88487971 88488342 -111141808 + THE1B LTR MaLR 1 364 0 11005 106 5 9 chr5 88488342 88489929 -111140221 + THE1B-int LTR MaLR 1 1580 0 1794 161 33 42 chr5 88489938 88490299 -111139851 + THE1B LTR MaLR 1 358 -6 1232 204 31 97 chr5 88490299 88490691 -111139459 + MLT1B LTR MaLR 22 387 -3 643 213 59 96 chr5 88490815 88491233 -111138917 - MLT1D LTR MaLR -3 623 1 5672 224 47 10 chr5 88491469 88494058 -111136092 - L1MC1 LINE L1 -179 6154 3478 1812 143 0 41 chr5 88494147 88494441 -111135709 - AluSq SINE Alu -31 282 1 893 236 22 99 chr5 88494441 88494793 -111135357 - MER67C LTR ERV1 -245 269 4 706 186 50 0 chr5 88494793 88494933 -111135217 + FRAM SINE Alu 1 146 -30 489 76 0 0 chr5 88494996 88495062 -111135088 + (CA)n Simple_repeat Simple_repeat 1 66 0 29 0 0 0 chr5 88495132 88495161 -111134989 + AT_rich Low_complexity Low_complexity 1 29 0 1248 243 10 14 chr5 88496131 88496427 -111133723 - AluJo SINE Alu -7 295 1 2507 182 22 0 chr5 88499446 88499908 -111130242 + MER101 LTR ERV1 1 472 -2 22 35 0 0 chr5 88500950 88500979 -111129171 + AT_rich Low_complexity Low_complexity 1 29 0 1871 160 128 8 chr5 88501772 88502154 -111127996 + MSTA LTR MaLR 1 428 0 331 247 11 0 chr5 88502808 88502897 -111127253 + L1MC4 LINE L1 6614 6703 -1339 192 77 0 0 chr5 88502897 88502923 -111127227 + (TA)n Simple_repeat Simple_repeat 2 27 0 613 215 7 7 chr5 88504754 88504889 -111125261 + MER67C LTR ERV1 269 403 -307 308 206 0 0 chr5 88505046 88505114 -111125036 + MER67A LTR ERV1 476 543 0 214 175 0 0 chr5 88506856 88506896 -111123254 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 27 29 0 0 chr5 88508157 88508191 -111121959 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr5 88508199 88508221 -111121929 + AT_rich Low_complexity Low_complexity 1 22 0 193 326 63 21 chr5 88508227 88508322 -111121828 - L2 LINE L2 -16 3297 3199 22 0 0 0 chr5 88508964 88508986 -111121164 + AT_rich Low_complexity Low_complexity 1 22 0 27 81 0 0 chr5 88509845 88509907 -111120243 + AT_rich Low_complexity Low_complexity 1 62 0 1910 111 7 4 chr5 88510627 88510898 -111119252 - AluSp SINE Alu -41 272 1 26 0 0 0 chr5 88512332 88512358 -111117792 + AT_rich Low_complexity Low_complexity 1 26 0 412 176 0 0 chr5 88512570 88512638 -111117512 + MSTD LTR MaLR 43 110 -286 574 224 9 0 chr5 88512645 88512752 -111117398 + MSTD LTR MaLR 230 337 -59 770 251 0 11 chr5 88513447 88513622 -111116528 - MLT1F1 LTR MaLR 0 567 395 397 258 67 72 chr5 88513700 88513894 -111116256 - MLT1F1 LTR MaLR -343 211 7 279 0 0 0 chr5 88513971 88514002 -111116148 + (TG)n Simple_repeat Simple_repeat 2 32 0 2161 89 26 3 chr5 88514029 88514331 -111115819 + AluY SINE Alu 1 309 -2 668 242 0 0 chr5 88514703 88514823 -111115327 + FLAM_C SINE Alu 1 120 -23 243 146 0 0 chr5 88514826 88514867 -111115283 + (T)n Simple_repeat Simple_repeat 1 41 0 758 201 0 34 chr5 88514867 88514977 -111115173 + FRAM SINE Alu 1 101 -211 2508 148 13 0 chr5 88514977 88515375 -111114775 - MER57A LTR ERV1 0 403 1 758 201 0 34 chr5 88515375 88515413 -111114737 + FRAM SINE Alu 101 139 -37 294 50 0 0 chr5 88515413 88515453 -111114697 + (TC)n Simple_repeat Simple_repeat 2 41 0 27 0 0 0 chr5 88515453 88515480 -111114670 + AT_rich Low_complexity Low_complexity 1 27 0 36 77 0 0 chr5 88515563 88515641 -111114509 + AT_rich Low_complexity Low_complexity 1 78 0 230 297 94 55 chr5 88515871 88515999 -111114151 - MIR3 SINE MIR -1 207 75 2068 118 0 0 chr5 88517903 88518209 -111111941 + AluSc SINE Alu 1 306 -3 294 269 128 51 chr5 88518352 88518508 -111111642 + MER63A DNA MER1_type 43 210 0 338 197 8 94 chr5 88519004 88519121 -111111029 + L1MDa LINE L1 1508 1614 -4926 1874 286 60 41 chr5 88519231 88520982 -111109168 + L1MDa LINE L1 1250 3073 -3467 268 207 12 12 chr5 88521152 88521234 -111108916 + (TA)n Simple_repeat Simple_repeat 2 83 0 631 341 20 12 chr5 88521238 88521490 -111108660 + LTR16C LTR ERVL 13 266 -225 25 0 0 0 chr5 88521712 88521737 -111108413 + AT_rich Low_complexity Low_complexity 1 25 0 1857 100 0 8 chr5 88521914 88522163 -111107987 - AluSg SINE Alu -16 294 48 181 222 86 74 chr5 88522699 88522780 -111107370 + L3 LINE CR1 923 1004 -573 * 187 261 92 15 chr5 88522759 88522824 -111107326 - MIR SINE MIR -173 89 20 276 303 25 82 chr5 88522959 88523081 -111107069 - MIR SINE MIR -122 140 26 26 0 0 0 chr5 88523161 88523187 -111106963 + AT_rich Low_complexity Low_complexity 1 26 0 243 0 0 0 chr5 88524297 88524324 -111105826 + (A)n Simple_repeat Simple_repeat 1 27 0 26 50 0 0 chr5 88525087 88525127 -111105023 + AT_rich Low_complexity Low_complexity 1 40 0 4293 112 26 7 chr5 88525249 88525936 -111104214 + L1PA12 LINE L1 5469 6168 0 24 0 0 0 chr5 88526279 88526303 -111103847 + AT_rich Low_complexity Low_complexity 1 24 0 6497 46 1 2 chr5 88526324 88527126 -111103024 - L1PA5 LINE L1 -1 6153 5353 2350 31 0 0 chr5 88527126 88527416 -111102734 + L1PA5 LINE L1 5055 5344 -802 273 148 0 37 chr5 88527416 88527470 -111102680 + MIR SINE MIR 81 132 -130 3006 93 20 11 chr5 88527602 88527643 -111102507 - MLT2A1 LTR ERVL 0 444 405 261 0 0 0 chr5 88527643 88527672 -111102478 + (TG)n Simple_repeat Simple_repeat 2 30 0 3006 93 20 11 chr5 88527672 88528070 -111102080 - MLT2A1 LTR ERVL -39 405 1 697 204 28 0 chr5 88528216 88528358 -111101792 + LTR40a LTR ERVL 374 519 0 944 254 28 94 chr5 88528359 88529039 -111101111 + HERVL40 LTR ERVL 1 722 -4808 704 270 92 0 chr5 88529040 88529236 -111100914 - MER58A DNA MER1_type 0 224 11 286 242 15 0 chr5 88529520 88529586 -111100564 + HERVL40 LTR ERVL 1021 1087 -4443 1131 38 0 0 chr5 88529774 88529905 -111100245 - AluY SINE Alu -180 131 1 551 270 36 109 chr5 88529962 88530107 -111100043 - L1MEd LINE L1 -5735 384 230 2025 82 46 36 chr5 88530107 88530413 -111099737 + AluSc SINE Alu 1 309 0 551 270 36 109 chr5 88530413 88530660 -111099490 - L1MEd LINE L1 -5889 230 21 368 331 91 11 chr5 88531768 88531943 -111098207 - ERVL LTR ERVL -2367 3397 3209 342 318 57 6 chr5 88532097 88532273 -111097877 - ERVL LTR ERVL -2683 2971 2787 459 274 40 84 chr5 88532830 88533177 -111096973 + L1MDb LINE L1 748 1079 -5330 1748 219 126 82 chr5 88533177 88534016 -111096134 - LTR28 LTR ERV1 0 1020 1 630 241 55 35 chr5 88534016 88534273 -111095877 + L1MDb LINE L1 1078 1339 -5057 1092 261 35 65 chr5 88534281 88534683 -111095467 - LTR40b LTR ERVL -59 403 14 21 57 0 0 chr5 88536466 88536501 -111093649 + AT_rich Low_complexity Low_complexity 1 35 0 365 323 31 26 chr5 88536945 88537137 -111093013 - LTR16C LTR ERVL -36 455 263 28 71 0 0 chr5 88537804 88537860 -111092290 + AT_rich Low_complexity Low_complexity 1 56 0 460 325 62 66 chr5 88537938 88538375 -111091775 - MLT1J LTR MaLR -53 458 24 214 340 85 25 chr5 88540127 88540362 -111089788 + L2 LINE L2 1752 2000 -1314 278 369 21 14 chr5 88540512 88540653 -111089497 + L2 LINE L2 2158 2299 -1015 1929 271 34 27 chr5 88540668 88541365 -111088785 + L1ME1 LINE L1 5442 6143 -23 1578 194 42 17 chr5 88541539 88541895 -111088255 - MLT1A1 LTR MaLR 0 365 1 329 303 10 0 chr5 88542827 88542926 -111087224 + MLT1K LTR MaLR 365 464 -124 2392 60 3 0 chr5 88543918 88544220 -111085930 + AluY SINE Alu 1 303 -8 323 296 86 18 chr5 88545280 88545500 -111084650 + L1MC4a LINE L1 4860 5094 -1052 3917 142 23 22 chr5 88545762 88546488 -111083662 - Tigger3b DNA MER2_type -1 1230 504 2318 153 39 61 chr5 88546641 88547132 -111083018 - Tigger3b DNA MER2_type -751 480 1 22 0 0 0 chr5 88547132 88547154 -111082996 + AT_rich Low_complexity Low_complexity 1 22 0 390 323 118 26 chr5 88547158 88547656 -111082494 + L1MC4a LINE L1 5373 5916 -1892 1262 153 0 15 chr5 88547668 88547903 -111082247 - AluJb SINE Alu 0 317 86 1779 124 44 22 chr5 88548084 88548359 -111081791 + AluSx SINE Alu 21 301 -11 35 54 0 0 chr5 88548417 88548473 -111081677 + AT_rich Low_complexity Low_complexity 1 56 0 27 49 0 0 chr5 88548818 88548859 -111081291 + AT_rich Low_complexity Low_complexity 1 41 0 2133 131 54 20 chr5 88548998 88549349 -111080801 + THE1B LTR MaLR 1 363 -1 495 319 99 5 chr5 88549409 88549622 -111080528 - MIR SINE MIR -24 238 6 26 30 0 0 chr5 88550225 88550258 -111079892 + AT_rich Low_complexity Low_complexity 1 33 0 29 47 0 0 chr5 88550849 88550892 -111079258 + AT_rich Low_complexity Low_complexity 1 43 0 1558 222 35 35 chr5 88550893 88551267 -111078883 - MLT1A2 LTR MaLR 0 374 1 637 161 9 142 chr5 88552844 88553062 -111077088 - MER53 DNA DNA 0 189 1 198 0 0 0 chr5 88554049 88554071 -111076079 + (T)n Simple_repeat Simple_repeat 1 22 0 428 244 167 6 chr5 88554606 88554762 -111075388 + MIR SINE MIR 79 259 -3 2760 161 9 4 chr5 88555354 88555807 -111074343 + MER66B LTR ERV1 27 481 -5 215 161 107 0 chr5 88555822 88555878 -111074272 + MIR SINE MIR 119 180 -82 1599 131 33 18 chr5 88555911 88556186 -111073964 + L1PB4 LINE L1 5876 6154 -2 1886 267 49 50 chr5 88556401 88557278 -111072872 - L1M4 LINE L1 -1954 4192 3317 438 283 121 69 chr5 88557320 88557740 -111072410 + L1M4 LINE L1 2928 3369 -2777 304 265 130 5 chr5 88557740 88557925 -111072225 + L1M4 LINE L1 2756 2963 -3183 * 1917 85 19 3 chr5 88557921 88558228 -111071922 - L1P LINE L1 -2849 3297 2986 6172 55 27 9 chr5 88558228 88559040 -111071110 + L1PA7 LINE L1 5326 6154 0 180 0 0 0 chr5 88560154 88560174 -111069976 + (GA)n Simple_repeat Simple_repeat 1 20 0 26 74 0 0 chr5 88560576 88560630 -111069520 + AT_rich Low_complexity Low_complexity 1 54 0 366 274 0 69 chr5 88561127 88561229 -111068921 + MIR SINE MIR 5 99 -163 5529 97 2 5 chr5 88561318 88562119 -111068031 + L1PB1 LINE L1 5286 6084 -67 349 351 35 6 chr5 88562473 88562644 -111067506 - LTR16A LTR ERVL -179 271 96 447 237 8 34 chr5 88562866 88562984 -111067166 - MLT1C LTR MaLR -352 115 1 241 195 39 52 chr5 88562988 88563065 -111067085 - L1MCc LINE L1 -6100 323 248 531 103 0 86 chr5 88563068 88563184 -111066966 - MLT2A1 LTR ERVL 0 444 339 4417 119 63 70 chr5 88563565 88564441 -111065709 + MER4D LTR ERV1 1 870 -2 21 43 0 22 chr5 88565055 88565081 -111065069 + AT_rich Low_complexity Low_complexity 1 27 -18 1975 144 0 0 chr5 88565081 88565373 -111064777 + AluJb SINE Alu 3 294 -18 21 43 0 22 chr5 88565373 88565392 -111064758 + AT_rich Low_complexity Low_complexity 27 45 0 22 35 0 0 chr5 88565417 88565446 -111064704 + AT_rich Low_complexity Low_complexity 1 29 0 477 90 0 0 chr5 88565931 88565998 -111064152 + (TG)n Simple_repeat Simple_repeat 1 67 0 1073 115 0 0 chr5 88566355 88566511 -111063639 + AluSg/x SINE Alu 154 309 -1 465 349 10 10 chr5 88566540 88566732 -111063418 - MIR SINE MIR 0 262 71 413 115 128 0 chr5 88566922 88567000 -111063150 - AluSg/x SINE Alu -6 303 216 253 176 11 44 chr5 88567277 88567408 -111062742 + (TA)n Simple_repeat Simple_repeat 1 126 0 321 82 0 0 chr5 88568045 88568094 -111062056 + (TG)n Simple_repeat Simple_repeat 2 50 0 221 376 161 17 chr5 88568306 88568710 -111061440 - L2 LINE L2 -457 2857 2396 2332 80 10 10 chr5 88569242 88569553 -111060597 + AluSp SINE Alu 1 311 -2 181 111 0 0 chr5 88570156 88570183 -111059967 + L2 LINE L2 3268 3294 -19 291 362 17 17 chr5 88570614 88570730 -111059420 + L2 LINE L2 3134 3249 -23 320 307 66 7 chr5 88571119 88571256 -111058894 + HAL1b LINE L1 432 576 -772 23 54 0 0 chr5 88571384 88571421 -111058729 + AT_rich Low_complexity Low_complexity 1 37 0 472 207 14 76 chr5 88571727 88571872 -111058278 + MLT2C1 LTR ERVL 260 395 -2 957 189 0 0 chr5 88571947 88572106 -111058044 - FRAM SINE Alu -6 160 2 214 246 0 0 chr5 88573047 88573104 -111057046 + (CA)n Simple_repeat Simple_repeat 2 58 0 1695 150 13 41 chr5 88573726 88573895 -111056255 - AluJo SINE Alu -5 307 150 2146 124 7 0 chr5 88573895 88574202 -111055948 - AluSx SINE Alu -3 309 1 1695 150 13 41 chr5 88574202 88574346 -111055804 - AluJo SINE Alu -162 150 3 21 0 0 0 chr5 88574378 88574399 -111055751 + AT_rich Low_complexity Low_complexity 1 21 0 230 86 29 0 chr5 88574409 88574444 -111055706 - MLT2C1 LTR ERVL 0 397 362 1153 196 55 110 chr5 88574504 88574679 -111055471 - MLT2C1 LTR ERVL -54 343 197 2044 74 0 60 chr5 88574679 88574978 -111055172 - AluY SINE Alu -30 281 1 1153 196 55 110 chr5 88574978 88575165 -111054985 - MLT2C1 LTR ERVL -200 197 1 218 278 146 44 chr5 88578098 88578303 -111051847 - L2 LINE L2 -100 3213 2988 2020 189 57 11 chr5 88578551 88578990 -111051160 - MER65C LTR ERV1 -2 459 1 29 28 0 0 chr5 88578994 88579030 -111051120 + AT_rich Low_complexity Low_complexity 1 36 0 1283 185 140 50 chr5 88579033 88579390 -111050760 - MLT1B LTR MaLR 0 390 2 1999 124 0 0 chr5 88580024 88580299 -111049851 + AluSg SINE Alu 35 309 -1 228 111 0 0 chr5 88580470 88580506 -111049644 + (CATTT)n Simple_repeat Simple_repeat 5 40 0 1423 176 0 4 chr5 88580614 88580852 -111049298 - AluJo SINE Alu -62 250 14 1958 149 3 16 chr5 88581636 88581952 -111048198 - AluSx SINE Alu 0 312 1 1589 205 11 6 chr5 88582789 88583201 -111046949 - MER65C LTR ERV1 0 461 1 23 0 0 0 chr5 88583314 88583337 -111046813 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr5 88583664 88583695 -111046455 + AT_rich Low_complexity Low_complexity 1 31 0 220 310 0 58 chr5 88584566 88584653 -111045497 - L2 LINE L2 0 3313 3232 650 308 99 37 chr5 88585201 88585688 -111044462 + LTR33 LTR ERVL 1 517 -4 230 0 33 0 chr5 88586278 88586308 -111043842 + (TA)n Simple_repeat Simple_repeat 2 32 0 2092 92 0 33 chr5 88586311 88586617 -111043533 - AluSg SINE Alu -14 296 1 1283 238 145 27 chr5 88587040 88587523 -111042627 - MLT1F LTR MaLR 0 542 3 21 36 0 0 chr5 88588283 88588311 -111041839 + AT_rich Low_complexity Low_complexity 1 28 0 242 329 49 61 chr5 88588512 88588676 -111041474 - L2 LINE L2 -759 2555 2394 23 0 0 0 chr5 88588740 88588763 -111041387 + AT_rich Low_complexity Low_complexity 1 23 0 1453 211 3 14 chr5 88588849 88589138 -111041012 + AluJb SINE Alu 1 286 -26 248 0 31 0 chr5 88589143 88589175 -111040975 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 1348 197 52 22 chr5 88589579 88589848 -111040302 + AluJo SINE Alu 1 277 -35 478 278 152 0 chr5 88590456 88590607 -111039543 - LTR16A1 LTR ERVL 0 457 284 198 150 0 0 chr5 88590660 88590700 -111039450 + (T)n Simple_repeat Simple_repeat 1 40 0 193 304 184 30 chr5 88590825 88591026 -111039124 + L2 LINE L2 2470 2701 -613 22 0 0 0 chr5 88591046 88591068 -111039082 + AT_rich Low_complexity Low_complexity 1 22 0 245 246 31 15 chr5 88591314 88591379 -111038771 + MIR SINE MIR 83 148 -114 556 248 62 71 chr5 88591817 88592027 -111038123 - MER63A DNA MER1_type -1 209 2 3157 98 2 5 chr5 88593485 88593932 -111036218 - L1PA11 LINE L1 0 6174 5729 5032 136 1 3 chr5 88593943 88594723 -111035427 + L1P LINE L1 3608 4386 -1760 6721 23 2 0 chr5 88594724 88595511 -111034639 - L1PA3 LINE L1 0 6155 5367 4625 27 7 0 chr5 88595510 88596071 -111034079 + L1P LINE L1 4267 4831 -1315 * 1992 71 32 0 chr5 88597269 88597521 -111032629 + AluY SINE Alu 40 299 -12 1743 140 43 0 chr5 88599485 88599764 -111030386 + AluSx SINE Alu 1 291 -21 1405 208 73 0 chr5 88600026 88600314 -111029836 + AluSx SINE Alu 1 309 -3 272 49 49 0 chr5 88600319 88600360 -111029790 + (GAAA)n Simple_repeat Simple_repeat 4 46 0 2373 70 3 6 chr5 88600407 88600719 -111029431 - AluY SINE Alu 0 311 1 2418 58 10 7 chr5 88600724 88601034 -111029116 - AluY SINE Alu 0 311 1 23 33 0 0 chr5 88601280 88601310 -111028840 + AT_rich Low_complexity Low_complexity 1 30 0 2292 242 79 33 chr5 88601360 88603369 -111026781 + L1MEc LINE L1 37 6368 -4 362 287 156 18 chr5 88603421 88603588 -111026562 + MIR SINE MIR 72 261 -1 3540 182 39 45 chr5 88603588 88604367 -111025783 + LTR1 LTR ERV1 1 774 -11 685 276 76 53 chr5 88604541 88604882 -111025268 - L2 LINE L2 -83 3230 2882 474 252 27 0 chr5 88605669 88605780 -111024370 - L2 LINE L2 0 3313 3200 5179 219 104 25 chr5 88655780 88657038 -110973112 - L1PA13 LINE L1 -5429 1358 2 245 423 22 22 chr5 88657569 88657706 -110972444 + L2 LINE L2 3099 3235 -37 436 280 14 14 chr5 88658943 88659086 -110971064 + MIR SINE MIR 90 232 -30 24 67 0 0 chr5 88659201 88659246 -110970904 + AT_rich Low_complexity Low_complexity 1 45 0 333 172 0 0 chr5 88659370 88659428 -110970722 - MER57A LTR ERV1 -343 60 3 226 163 0 61 chr5 88660567 88660616 -110969534 + A-rich Low_complexity Low_complexity 2 47 0 225 197 14 56 chr5 88660655 88660726 -110969424 + A-rich Low_complexity Low_complexity 4 71 0 231 345 9 36 chr5 88660792 88660902 -110969248 + LTR16B LTR ERVL 26 132 -332 1743 148 78 33 chr5 88661153 88661512 -110968638 - THE1C LTR MaLR 0 375 1 185 329 0 55 chr5 88661814 88661887 -110968263 - L2 LINE L2 -18 3254 3186 199 381 62 11 chr5 88662062 88662238 -110967912 - L2 LINE L2 -414 2900 2716 620 323 58 0 chr5 88662533 88662759 -110967391 + MIR SINE MIR 14 252 -10 216 0 0 0 chr5 88663555 88663579 -110966571 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 341 258 132 6 chr5 88664151 88664333 -110965817 + L1MEc LINE L1 1266 1470 -4926 320 0 0 0 chr5 88664987 88665023 -110965127 - tRNA-Gly-GGC tRNA tRNA -37 37 2 1314 65 0 0 chr5 88665023 88665191 -110964959 + L1PA5 LINE L1 5979 6146 -8 4788 174 30 7 chr5 88665208 88666553 -110963597 + L1P4 LINE L1 4304 5681 -485 207 0 0 0 chr5 88666559 88666582 -110963568 + (TA)n Simple_repeat Simple_repeat 1 23 0 291 28 0 0 chr5 88666698 88666734 -110963416 + (CA)n Simple_repeat Simple_repeat 2 37 0 1084 208 19 5 chr5 88666840 88667052 -110963098 - MLT2D LTR ERVL -117 297 83 3048 37 5 47 chr5 88667052 88667461 -110962689 - L1PA4 LINE L1 -384 5771 5380 2035 28 16 0 chr5 88667461 88667715 -110962435 + L1PA4 LINE L1 5776 6033 -122 1228 238 67 3 chr5 88667857 88668185 -110961965 - L1MC/D LINE L1 -1963 5822 5474 1012 187 5 0 chr5 88668730 88668939 -110961211 - L1MA7 LINE L1 0 6291 6082 341 235 10 10 chr5 88668940 88669042 -110961108 + MER95 LTR ERV 330 431 0 1379 205 44 3 chr5 88669411 88669586 -110960564 - AluJo SINE Alu -7 305 112 234 0 0 0 chr5 88669586 88669612 -110960538 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1379 205 44 3 chr5 88669612 88669729 -110960421 - AluJo SINE Alu -200 112 1 340 313 49 43 chr5 88669733 88670270 -110959880 - L1MEd LINE L1 -4760 1550 971 29 0 0 0 chr5 88670296 88670325 -110959825 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr5 88670697 88670733 -110959417 + AT_rich Low_complexity Low_complexity 1 36 0 913 197 22 0 chr5 88670983 88671166 -110958984 + L1P LINE L1 1608 1794 -4352 6837 169 68 0 chr5 88671201 88672911 -110957239 - L1P4 LINE L1 -501 6313 4490 1763 174 84 21 chr5 88672908 88673452 -110956698 - L1P4 LINE L1 -4352 2445 1835 * 249 316 59 22 chr5 88673942 88674078 -110956072 - MLT1I LTR MaLR -18 391 251 1949 165 0 21 chr5 88674088 88674421 -110955729 - MER1B DNA MER1_type 0 339 14 304 262 126 19 chr5 88674417 88674520 -110955630 - MLT1I LTR MaLR -178 231 118 * 226 302 81 12 chr5 88675694 88675780 -110954370 - MIR SINE MIR -170 92 1 647 133 19 0 chr5 88676776 88676881 -110953269 - THE1B LTR MaLR -257 107 1 2638 197 15 52 chr5 88676883 88677534 -110952616 + L1 LINE L1 3873 4499 -1647 1095 155 52 41 chr5 88677535 88677729 -110952421 + THE1B LTR MaLR 98 293 -71 895 154 19 19 chr5 88678585 88678747 -110951403 - AluJb SINE Alu -19 293 132 213 363 53 35 chr5 88678802 88678915 -110951235 + L2 LINE L2 3199 3313 0 46 19 0 0 chr5 88679236 88679289 -110950861 + AT_rich Low_complexity Low_complexity 1 53 0 533 42 96 24 chr5 88679289 88679456 -110950694 + (TA)n Simple_repeat Simple_repeat 2 180 0 21 0 0 0 chr5 88679629 88679650 -110950500 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr5 88680102 88680132 -110950018 + AT_rich Low_complexity Low_complexity 1 30 0 369 345 23 23 chr5 88681415 88681592 -110948558 + MER5B DNA MER1_type 1 177 -1 493 347 45 29 chr5 88681748 88681990 -110948160 - MIR SINE MIR -6 256 11 247 342 0 0 chr5 88682732 88682811 -110947339 - L2 LINE L2 -8 3264 3186 486 195 16 124 chr5 88683376 88683561 -110946589 - LTR41 LTR ERVL -10 763 599 608 283 98 18 chr5 88684009 88684285 -110945865 - LTR41 LTR ERVL -475 298 1 27 62 0 0 chr5 88684687 88684735 -110945415 + AT_rich Low_complexity Low_complexity 1 48 0 189 0 0 0 chr5 88686354 88686375 -110943775 + (CA)n Simple_repeat Simple_repeat 2 22 0 206 294 15 44 chr5 88686440 88686508 -110943642 - L2 LINE L2 0 3313 3248 23 54 0 0 chr5 88686653 88686690 -110943460 + AT_rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr5 88686788 88686824 -110943326 + AT_rich Low_complexity Low_complexity 1 36 0 1505 223 35 55 chr5 88687617 88688016 -110942134 + MSTD LTR MaLR 4 394 -2 27 29 0 0 chr5 88688243 88688277 -110941873 + AT_rich Low_complexity Low_complexity 1 34 0 1048 176 131 28 chr5 88688366 88688726 -110941424 - MSTC LTR MaLR 0 428 1 553 204 221 17 chr5 88688732 88688913 -110941237 - MSTC-int LTR MaLR -6 1729 1512 1059 158 69 5 chr5 88688921 88689124 -110941026 - Tigger1 DNA MER2_type -1 2417 2202 885 185 0 6 chr5 88689113 88689270 -110940880 - Tigger1 DNA MER2_type -2261 157 2 * 5164 249 40 49 chr5 88689271 88690790 -110939360 - MSTC-int LTR MaLR -229 1506 2 1338 177 182 35 chr5 88690792 88691165 -110938985 - MSTC LTR MaLR 0 428 1 580 214 77 139 chr5 88691251 88691682 -110938468 - MLT1J LTR MaLR -105 406 3 289 295 0 13 chr5 88691707 88691785 -110938365 + CT-rich Low_complexity Low_complexity 2 78 0 22 0 0 0 chr5 88691968 88691990 -110938160 + AT_rich Low_complexity Low_complexity 1 22 0 1955 126 44 0 chr5 88693095 88693388 -110936762 + AluSx SINE Alu 1 306 -6 23 78 0 0 chr5 88693578 88693629 -110936521 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr5 88693941 88693962 -110936188 + AT_rich Low_complexity Low_complexity 1 21 0 255 333 54 108 chr5 88694337 88694577 -110935573 + L2 LINE L2 3019 3245 -27 1783 284 56 18 chr5 88695205 88695772 -110934378 - MER77 LTR ERV1 -9 596 53 381 331 71 16 chr5 88696174 88696723 -110933427 + L1ME3A LINE L1 4734 5312 -834 2889 159 35 2 chr5 88696723 88697270 -110932880 + L1MA4 LINE L1 5736 6300 0 599 315 77 7 chr5 88697345 88697643 -110932507 + L1ME3A LINE L1 5353 5671 -499 235 304 125 0 chr5 88697761 88697873 -110932277 + L1ME3A LINE L1 5995 6120 -50 32 26 0 0 chr5 88697883 88697922 -110932228 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr5 88697964 88697994 -110932156 + AT_rich Low_complexity Low_complexity 1 30 0 309 59 3 0 chr5 88698033 88698078 -110932072 - MLT2B2 LTR ERVL -8 507 411 2025 164 22 68 chr5 88698113 88698390 -110931760 - Tigger2a DNA MER2_type -2275 433 182 5272 55 53 0 chr5 88698390 88699075 -110931075 + L1PA5 LINE L1 5434 6154 0 2025 164 22 68 chr5 88699075 88699241 -110930909 - Tigger2a DNA MER2_type -2526 182 10 1477 217 0 10 chr5 88699758 88700053 -110930097 + AluJb SINE Alu 1 292 -20 252 0 0 0 chr5 88700146 88700174 -110929976 + (TC)n Simple_repeat Simple_repeat 1 28 0 252 0 0 0 chr5 88700173 88700201 -110929949 + (CA)n Simple_repeat Simple_repeat 1 28 0 23 54 0 0 chr5 88700213 88700250 -110929900 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 88700789 88700810 -110929340 + AT_rich Low_complexity Low_complexity 1 21 0 229 291 134 52 chr5 88700974 88701146 -110929004 + MIR SINE MIR 64 249 -13 249 91 36 18 chr5 88702245 88702300 -110927850 + (TAA)n Simple_repeat Simple_repeat 2 57 0 226 261 92 0 chr5 88702328 88702393 -110927757 + MIR SINE MIR 92 162 -100 224 250 25 50 chr5 88702817 88702897 -110927253 - L2 LINE L2 -5 3308 3231 21 0 0 0 chr5 88702907 88702928 -110927222 + AT_rich Low_complexity Low_complexity 1 21 0 384 362 117 25 chr5 88703834 88704116 -110926034 + HAL1 LINE L1 239 546 -1961 546 90 0 13 chr5 88704119 88704197 -110925953 + MADE1 DNA Mariner 4 80 0 1832 300 124 26 chr5 88704221 88705401 -110924749 + HAL1 LINE L1 628 1922 -585 276 279 91 7 chr5 88705467 88705621 -110924529 + HAL1 LINE L1 2055 2221 -286 207 0 0 0 chr5 88705720 88705743 -110924407 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 210 37 0 0 chr5 88705742 88705769 -110924381 + (CA)n Simple_repeat Simple_repeat 1 27 0 1251 230 12 0 chr5 88705865 88706117 -110924033 - MLT1D LTR MaLR 0 505 251 216 0 0 0 chr5 88706284 88706308 -110923842 + (A)n Simple_repeat Simple_repeat 1 24 0 1203 226 39 116 chr5 88706972 88707020 -110923130 - MLT2B1 LTR ERVL 0 520 470 598 25 25 0 chr5 88707020 88707100 -110923050 + (TAGA)n Simple_repeat Simple_repeat 3 84 0 1203 226 39 116 chr5 88707100 88707614 -110922536 - MLT2B1 LTR ERVL -50 470 1 22 0 0 0 chr5 88707776 88707798 -110922352 + AT_rich Low_complexity Low_complexity 1 22 0 358 226 0 87 chr5 88707976 88708091 -110922059 - MLT1D LTR MaLR -341 164 60 * 563 235 7 47 chr5 88708083 88708232 -110921918 - MLT1E2 LTR MaLR -482 144 2 508 251 111 34 chr5 88708442 88708677 -110921473 + HAL1 LINE L1 2255 2507 0 261 0 0 0 chr5 88708921 88708950 -110921200 + (TA)n Simple_repeat Simple_repeat 2 30 0 908 196 51 28 chr5 88710140 88710354 -110919796 + MER20 DNA MER1_type 1 219 0 215 294 24 95 chr5 88710929 88710983 -110919167 + L2 LINE L2 3156 3212 -60 2266 102 0 0 chr5 88710983 88711286 -110918864 + AluSq SINE Alu 1 303 -10 215 294 24 95 chr5 88711286 88711357 -110918793 + L2 LINE L2 3212 3272 0 670 175 7 13 chr5 88711600 88711754 -110918396 + GA-rich Low_complexity Low_complexity 4 156 0 1830 261 176 72 chr5 88711914 88713127 -110917023 + Charlie2b DNA MER1_type 78 1416 -1366 490 218 73 0 chr5 88713882 88714006 -110916144 + MER8 DNA MER2_type 45 177 -62 289 225 0 50 chr5 88714036 88714116 -110916034 - Tigger2a DNA MER2_type -358 76 1 339 191 0 0 chr5 88714345 88714413 -110915737 + (TATG)n Simple_repeat Simple_repeat 2 69 0 5075 39 16 0 chr5 88714416 88715037 -110915113 - L1PA7 LINE L1 -17 6137 5507 256 194 229 97 chr5 88716865 88717040 -110913110 + MIR SINE MIR 63 260 -2 2061 81 0 52 chr5 88717145 88717453 -110912697 - AluY SINE Alu -6 305 14 253 188 29 0 chr5 88717825 88717894 -110912256 + (TA)n Simple_repeat Simple_repeat 1 71 0 23 0 0 0 chr5 88717949 88717972 -110912178 + AT_rich Low_complexity Low_complexity 1 23 0 1361 158 8 11 chr5 88718496 88718761 -110911389 - L1MB7 LINE L1 -19 6165 5902 225 395 30 52 chr5 88718910 88719044 -110911106 + MER5A DNA MER1_type 38 179 -10 270 0 0 0 chr5 88719157 88719187 -110910963 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 30 45 0 0 chr5 88719290 88719334 -110910816 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr5 88719526 88719549 -110910601 + AT_rich Low_complexity Low_complexity 1 23 0 476 47 109 36 chr5 88722312 88722647 -110907503 + (CTATA)n Simple_repeat Simple_repeat 1 359 0 303 238 6 49 chr5 88722651 88722815 -110907335 + (TA)n Simple_repeat Simple_repeat 2 158 0 378 362 41 15 chr5 88722868 88723064 -110907086 - L2 LINE L2 -941 2373 2173 26 30 0 0 chr5 88724641 88724674 -110905476 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 88724739 88724769 -110905381 + AT_rich Low_complexity Low_complexity 1 30 0 228 250 88 38 chr5 88725101 88725181 -110904969 + L2 LINE L2 3229 3312 -1 568 26 26 0 chr5 88726342 88726420 -110903730 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 340 277 31 69 chr5 88726786 88726876 -110903274 - L2 LINE L2 0 3313 3230 1989 138 0 10 chr5 88726876 88727174 -110902976 + AluSx SINE Alu 5 299 -13 340 277 31 69 chr5 88727174 88727242 -110902908 - L2 LINE L2 -83 3230 3161 253 372 189 0 chr5 88727614 88727805 -110902345 + MIR SINE MIR 2 228 -34 387 89 0 0 chr5 88728058 88728114 -110902036 + (TA)n Simple_repeat Simple_repeat 2 57 0 1215 164 19 10 chr5 88729138 88729345 -110900805 + AluJo SINE Alu 1 209 -103 1872 226 66 47 chr5 88729602 88730134 -110900016 - MLT2B3 LTR ERVL -12 542 1 192 40 0 0 chr5 88731571 88731596 -110898554 + (A)n Simple_repeat Simple_repeat 1 25 0 1585 171 7 46 chr5 88732360 88732665 -110897485 + AluJo SINE Alu 5 297 -15 625 286 96 18 chr5 88733184 88733404 -110896746 - MIR SINE MIR 0 262 26 252 365 0 10 chr5 88733444 88733540 -110896610 - MIR SINE MIR -71 191 97 641 238 149 0 chr5 88733553 88733734 -110896416 - MER3 DNA MER1_type 0 209 2 10925 37 0 1 chr5 88734522 88735860 -110894290 - L1PA3 LINE L1 -1643 4503 3168 7795 18 0 0 chr5 88735860 88737512 -110892638 + L1PA3 LINE L1 4504 6155 0 636 196 98 0 chr5 88738021 88738184 -110891966 + L1MA9 LINE L1 5998 6176 -136 250 171 71 0 chr5 88738192 88738262 -110891888 + L1MA9 LINE L1 6228 6302 -10 545 210 185 58 chr5 88740449 88740654 -110889496 - MIR SINE MIR -27 235 5 242 195 46 69 chr5 88741040 88741127 -110889023 - MLT1E1 LTR MaLR 0 624 540 1336 195 33 66 chr5 88741130 88741533 -110888617 - MLT2B3 LTR ERVL 0 554 167 808 227 128 91 chr5 88741635 88742018 -110888132 - MLT1E1 LTR MaLR -204 450 54 33 43 0 0 chr5 88742068 88742115 -110888035 + AT_rich Low_complexity Low_complexity 1 47 0 306 0 0 0 chr5 88742298 88742332 -110887818 + (TG)n Simple_repeat Simple_repeat 1 34 0 23 54 0 0 chr5 88742630 88742667 -110887483 + AT_rich Low_complexity Low_complexity 1 37 0 505 306 42 7 chr5 88742697 88742841 -110887309 - MIR SINE MIR -111 151 3 599 297 90 68 chr5 88743481 88743980 -110886170 - LTR67 LTR ERVL -4 553 44 713 233 6 13 chr5 88744025 88744184 -110885966 + L1PB4 LINE L1 5999 6156 0 192 214 71 0 chr5 88744292 88744348 -110885802 + MIR SINE MIR 201 260 -2 380 164 82 0 chr5 88745704 88745777 -110884373 + L1PB4 LINE L1 6076 6154 -2 2306 114 29 0 chr5 88747101 88747443 -110882707 - Tigger1 DNA MER2_type -3 2415 2064 430 97 0 3 chr5 88747443 88747619 -110882531 + AluSg SINE Alu 1 230 -79 257 272 29 0 chr5 88749111 88749214 -110880936 + (TA)n Simple_repeat Simple_repeat 2 107 0 256 286 0 0 chr5 88750236 88750306 -110879844 + T-rich Low_complexity Low_complexity 1 70 0 234 394 53 0 chr5 88750311 88750443 -110879707 + L2 LINE L2 2384 2522 -792 236 304 99 14 chr5 88750674 88750840 -110879310 - MIR SINE MIR -59 203 25 1346 242 44 26 chr5 88751193 88751582 -110878568 + MSTD LTR MaLR 1 396 0 1063 267 98 38 chr5 88752077 88752504 -110877646 - MER77 LTR ERV1 -8 597 145 417 250 114 14 chr5 88752522 88752662 -110877488 - MER77 LTR ERV1 -396 209 56 1340 180 31 58 chr5 88753294 88753399 -110876751 + AluJo SINE Alu 19 125 -187 2087 85 0 44 chr5 88753399 88753694 -110876456 - AluSp SINE Alu -16 297 16 1340 180 31 58 chr5 88753694 88753882 -110876268 + AluJo SINE Alu 125 304 -8 21 0 0 0 chr5 88754365 88754386 -110875764 + AT_rich Low_complexity Low_complexity 1 21 0 2906 115 8 0 chr5 88754573 88754973 -110875177 + MLT2A1 LTR ERVL 1 403 -41 182 147 42 32 chr5 88754979 88755074 -110875076 + (TA)n Simple_repeat Simple_repeat 2 97 0 474 18 0 0 chr5 88755088 88755143 -110875007 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 280 30 0 0 chr5 88755143 88755176 -110874974 + MLT2A1 LTR ERVL 404 436 -8 36874 81 16 2 chr5 88755180 88759979 -110870171 + HERVL-A1 LTR ERVL 1 4865 -789 1862 200 29 31 chr5 88759980 88760430 -110869720 + LTR2 LTR ERV1 1 449 0 3496 238 45 42 chr5 88760430 88761814 -110868336 + HERVE LTR ERV1 1 1582 -6441 13924 186 27 25 chr5 88761815 88764491 -110865659 + HERVE LTR ERV1 2936 5617 -2196 3091 193 2 0 chr5 88764546 88765085 -110865065 + HERVE LTR ERV1 6356 6895 -1 1794 194 67 28 chr5 88765085 88765288 -110864862 + LTR2 LTR ERV1 1 195 -254 204 40 0 0 chr5 88765288 88765313 -110864837 + (TTCTG)n Simple_repeat Simple_repeat 1 25 0 1794 194 67 28 chr5 88765313 88765541 -110864609 + LTR2 LTR ERV1 195 449 0 1683 105 46 0 chr5 88765541 88765779 -110864371 + HERVL LTR ERVL 4863 5111 -543 1219 131 1 7 chr5 88765780 88765975 -110864175 - pTR5 LTR ERV1 -2046 392 66 364 204 31 20 chr5 88765975 88766073 -110864077 - LTR30 LTR ERV1 -80 642 544 4400 127 151 36 chr5 88766073 88767079 -110863071 - pTR5 LTR ERV1 -413 2025 743 4143 75 20 2 chr5 88767068 88767614 -110862536 + HERVL-A1 LTR ERVL 5098 5653 -1 * 3130 91 0 0 chr5 88767615 88768022 -110862128 + MLT2A1 LTR ERVL 1 407 -37 377 68 14 82 chr5 88768039 88768112 -110862038 + MLT2A1 LTR ERVL 377 444 0 735 143 143 0 chr5 88768218 88768365 -110861785 + L1MB3 LINE L1 6016 6183 0 24 32 0 0 chr5 88768641 88768672 -110861478 + AT_rich Low_complexity Low_complexity 1 31 0 425 278 165 10 chr5 88768958 88769152 -110860998 - MER58A DNA MER1_type 0 224 1 24 32 0 0 chr5 88769986 88770017 -110860133 + AT_rich Low_complexity Low_complexity 1 31 0 1852 135 0 31 chr5 88770353 88770642 -110859508 + AluSx SINE Alu 18 297 -15 526 295 62 68 chr5 88771883 88772208 -110857942 + LTR16A1 LTR ERVL 127 449 -8 360 0 0 0 chr5 88774060 88774100 -110856050 + (TG)n Simple_repeat Simple_repeat 2 41 0 202 122 20 20 chr5 88774192 88774241 -110855909 + (TA)n Simple_repeat Simple_repeat 1 49 0 204 40 0 0 chr5 88774367 88774392 -110855758 + (TA)n Simple_repeat Simple_repeat 2 26 0 2368 267 90 17 chr5 88775606 88776802 -110853348 - L1M4 LINE L1 -1166 4980 3697 189 240 40 0 chr5 88776916 88776966 -110853184 - L2 LINE L2 0 3272 3221 * 325 326 105 22 chr5 88776934 88777115 -110853035 - MIR SINE MIR -14 248 53 2264 112 12 79 chr5 88777120 88777523 -110852627 - MER51B LTR ERV1 -1 376 1 1939 155 17 0 chr5 88777656 88777952 -110852198 + AluSx SINE Alu 1 301 -11 1462 192 152 7 chr5 88778536 88778969 -110851181 - LTR54B LTR ERV1 -2 496 1 26 50 0 0 chr5 88779387 88779427 -110850723 + AT_rich Low_complexity Low_complexity 1 40 0 1662 153 56 47 chr5 88779620 88779959 -110850191 - MER2 DNA MER2_type -2 342 1 207 261 0 0 chr5 88780139 88780185 -110849965 + L2 LINE L2 3268 3313 0 330 313 112 0 chr5 88780930 88781064 -110849086 + MIR SINE MIR 8 156 -106 498 323 76 48 chr5 88781170 88781486 -110848664 + MLT1I LTR MaLR 72 396 -13 231 234 0 0 chr5 88781647 88781694 -110848456 + MIR SINE MIR 206 252 -10 26 0 0 0 chr5 88782231 88782257 -110847893 + AT_rich Low_complexity Low_complexity 1 26 0 443 323 85 71 chr5 88782642 88783066 -110847084 - L2 LINE L2 -4 3309 2880 196 343 77 29 chr5 88783094 88783301 -110846849 - L2 LINE L2 -635 2679 2463 223 280 53 0 chr5 88783368 88783443 -110846707 - MIR SINE MIR 0 262 184 451 295 72 48 chr5 88783460 88783648 -110846502 - MIR SINE MIR -47 215 27 2279 129 0 9 chr5 88783866 88784207 -110845943 + MER7A DNA MER2_type 10 345 -1 358 287 11 0 chr5 88784251 88784345 -110845805 + L1ME3A LINE L1 5982 6076 -94 24 53 0 0 chr5 88784438 88784476 -110845674 + AT_rich Low_complexity Low_complexity 1 38 0 239 242 0 0 chr5 88784607 88784669 -110845481 - L2 LINE L2 -1329 1985 1924 539 241 0 28 chr5 88784987 88785128 -110845022 + MLT1E LTR MaLR 455 591 -2 1077 202 12 57 chr5 88785304 88785551 -110844599 + MER8 DNA MER2_type 3 238 -1 213 121 0 0 chr5 88786757 88786790 -110843360 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 4302 150 13 21 chr5 88786850 88786967 -110843183 + L1PA16 LINE L1 5309 5425 -729 192 77 0 0 chr5 88786967 88786993 -110843157 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4302 150 13 21 chr5 88786993 88787704 -110842446 + L1PA16 LINE L1 5425 6154 0 226 364 20 20 chr5 88787889 88787988 -110842162 - LTR67 LTR ERVL -367 190 92 1591 26 10 0 chr5 88788277 88788471 -110841679 - L1PA3 LINE L1 -1 6154 5959 5227 222 48 127 chr5 88790572 88790928 -110839222 - L1MC/D LINE L1 -743 5797 5414 405 0 0 0 chr5 88790928 88790973 -110839177 + (TG)n Simple_repeat Simple_repeat 2 46 0 5227 222 48 127 chr5 88790973 88793851 -110836299 - L1MC/D LINE L1 -1126 5414 2915 4010 155 15 16 chr5 88794031 88794768 -110835382 - L1PB4 LINE L1 -2 6154 5419 2214 260 98 55 chr5 88794780 88795066 -110835084 - L1MC/D LINE L1 -4226 2314 2042 1784 176 0 3 chr5 88795066 88795356 -110834794 - AluJb SINE Alu -23 289 1 2214 260 98 55 chr5 88795356 88795639 -110834511 - L1MC/D LINE L1 -4498 2042 1773 192 40 0 0 chr5 88795639 88795664 -110834486 + (TG)n Simple_repeat Simple_repeat 1 25 0 2214 260 98 55 chr5 88795664 88795980 -110834170 - L1MC/D LINE L1 -4767 1773 1472 1687 206 3 41 chr5 88795980 88796369 -110833781 + MLT1A2 LTR MaLR 1 374 0 2214 260 98 55 chr5 88796369 88796696 -110833454 - L1MC/D LINE L1 -5068 1472 1048 775 176 0 0 chr5 88796724 88796855 -110833295 - FLAM_C SINE Alu -2 131 1 335 264 55 0 chr5 88798618 88798709 -110831441 + MLT1E2 LTR MaLR 3 98 -528 265 211 0 0 chr5 88798715 88798772 -110831378 + MLT1E2 LTR MaLR 568 624 -2 636 265 16 47 chr5 88798793 88799050 -110831100 + L1MC4a LINE L1 5638 5886 -1922 319 21 42 0 chr5 88799617 88799665 -110830485 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 206 158 0 26 chr5 88799773 88799811 -110830339 + GA-rich Low_complexity Low_complexity 2 38 0 350 340 57 60 chr5 88801421 88801816 -110828334 - L2 LINE L2 -219 3053 2657 27 29 0 0 chr5 88802908 88802942 -110827208 + AT_rich Low_complexity Low_complexity 1 34 0 1512 184 8 0 chr5 88803179 88803446 -110826704 - AluJo SINE Alu -14 298 30 2114 110 3 7 chr5 88803830 88804129 -110826021 + AluSq SINE Alu 1 298 -15 189 107 0 0 chr5 88804179 88804207 -110825943 + (A)n Simple_repeat Simple_repeat 1 28 0 697 65 0 0 chr5 88804468 88804560 -110825590 - L1PA10 LINE L1 -1 6167 6076 1312 96 0 0 chr5 88804561 88804739 -110825411 + L1PA10 LINE L1 5707 5884 -284 337 332 35 0 chr5 88804752 88804885 -110825265 - MIR SINE MIR -57 151 16 256 353 0 52 chr5 88804936 88805052 -110825098 - MIR SINE MIR -106 156 47 456 136 0 0 chr5 88805345 88805411 -110824739 + L1MC1 LINE L1 6237 6302 -31 509 232 65 16 chr5 88805702 88805887 -110824263 - MER95 LTR ERV 0 431 238 2243 78 7 0 chr5 88806035 88806342 -110823808 + AluY SINE Alu 1 309 -2 418 317 0 0 chr5 88806720 88806824 -110823326 + MIR SINE MIR 1 104 -158 262 189 49 90 chr5 88806936 88807058 -110823092 + LTR33A LTR ERVL 407 523 0 524 261 220 0 chr5 88807505 88807746 -110822404 + L2 LINE L2 2253 2546 -768 676 303 61 33 chr5 88807880 88808240 -110821910 + L2 LINE L2 2935 3304 -9 23 92 0 0 chr5 88808820 88808885 -110821265 + AT_rich Low_complexity Low_complexity 1 65 0 294 289 93 0 chr5 88808948 88809045 -110821105 - MIR SINE MIR -75 187 82 249 363 134 23 chr5 88809288 88809459 -110820691 - MIR SINE MIR -70 192 3 521 71 14 0 chr5 88810515 88810585 -110819565 + AluSp SINE Alu 67 137 -176 39444 48 51 1 chr5 88810585 88816440 -110813710 + L1HS LINE L1 1 6154 -1 24 0 0 0 chr5 88816440 88816464 -110813686 + AT_rich Low_complexity Low_complexity 1 24 0 1086 226 45 40 chr5 88816649 88816858 -110813292 - L1 LINE L1 -3002 3144 2931 2444 62 0 0 chr5 88816858 88817163 -110812987 - AluY SINE Alu -6 305 1 1086 226 45 40 chr5 88817163 88817333 -110812817 - L1 LINE L1 -3215 2931 2763 509 152 0 19 chr5 88818223 88818328 -110811822 + L1MA3 LINE L1 4404 4506 -1640 3461 191 22 31 chr5 88819739 88821336 -110808814 + L1MA3 LINE L1 4487 6043 -262 1522 222 55 8 chr5 88821080 88821441 -110808709 + L1PB4 LINE L1 5776 6153 -3 * 299 366 116 53 chr5 88822444 88822857 -110807293 - L2 LINE L2 -6 3266 2828 2356 80 0 0 chr5 88822862 88823163 -110806987 + AluY SINE Alu 1 301 -10 1228 279 200 65 chr5 88823469 88824043 -110806107 + MLT1E3 LTR MaLR 3 624 0 1735 189 0 60 chr5 88825215 88825581 -110804569 - MLT1C LTR MaLR -123 344 1 22 0 0 0 chr5 88826812 88826834 -110803316 + AT_rich Low_complexity Low_complexity 1 22 0 1567 217 135 23 chr5 88826835 88827360 -110802790 + L1MC4 LINE L1 7317 7900 -142 915 223 5 29 chr5 88878191 88878397 -110751753 + MER20 DNA MER1_type 1 201 -18 6428 71 6 3 chr5 88878494 88879354 -110750796 + L1PA7 LINE L1 5287 6148 -6 200 125 0 25 chr5 88879364 88879404 -110750746 + (TA)n Simple_repeat Simple_repeat 2 40 0 413 242 16 17 chr5 88879435 88879577 -110750573 + L1ME1 LINE L1 6034 6332 -2 1965 203 0 0 chr5 88879602 88879947 -110750203 + L1MA4A LINE L1 47 391 -6458 1071 217 5 0 chr5 88879937 88880140 -110750010 + L1MA4A LINE L1 1348 1551 -5298 * 1726 193 40 16 chr5 88880135 88880508 -110749642 + L1MA4A LINE L1 3367 3748 -3100 2401 138 33 0 chr5 88880508 88880869 -110749281 + MSTA LTR MaLR 1 373 -55 9672 175 22 13 chr5 88880869 88883757 -110746393 + L1MA4A LINE L1 4098 7005 0 209 284 95 26 chr5 88883813 88883929 -110746221 - L2 LINE L2 0 3313 3190 460 228 176 7 chr5 88884098 88884234 -110745916 - MIR SINE MIR -71 191 33 426 111 97 0 chr5 88884605 88884677 -110745473 + MLT1J2 LTR MaLR 354 432 -18 2671 91 13 8 chr5 88885538 88885911 -110744239 - THE1C LTR MaLR 0 375 1 2081 74 13 58 chr5 88886303 88886615 -110743535 - AluSc SINE Alu -11 298 1 982 102 0 0 chr5 88886615 88886742 -110743408 - AluSg1 SINE Alu -182 127 1 327 169 78 13 chr5 88887150 88887227 -110742923 - MARNA DNA Mariner -222 364 283 773 94 34 8 chr5 88887449 88887566 -110742584 + THE1C LTR MaLR 104 223 -152 778 209 27 0 chr5 88887569 88887756 -110742394 - MER69 DNA AcHobo -184 2342 2151 2409 82 3 0 chr5 88887850 88888156 -110741994 - AluSc SINE Alu -2 307 1 2762 266 82 45 chr5 88888197 88889105 -110741045 + L1MC4 LINE L1 6667 7639 -403 1790 137 46 80 chr5 88889105 88889493 -110740657 - THE1C LTR MaLR 0 375 1 2762 266 82 45 chr5 88889493 88889902 -110740248 + L1MC4 LINE L1 7639 8032 -10 30 0 0 0 chr5 88889903 88889933 -110740217 + AT_rich Low_complexity Low_complexity 1 30 0 202 257 38 0 chr5 88889933 88890038 -110740112 + (TA)n Simple_repeat Simple_repeat 2 110 0 2516 172 17 2 chr5 88890056 88890474 -110739676 + MSTB LTR MaLR 3 426 0 1999 172 11 3 chr5 88890494 88890848 -110739302 - L1PB4 LINE L1 -4 6152 5796 216 163 0 0 chr5 88890862 88890905 -110739245 + (TA)n Simple_repeat Simple_repeat 2 44 0 8006 179 22 12 chr5 88890905 88893070 -110737080 - L1PB4 LINE L1 -365 5791 3600 2428 101 19 29 chr5 88893562 88893940 -110736210 - THE1C LTR MaLR 0 375 2 192 77 0 0 chr5 88893941 88893967 -110736183 + (CA)n Simple_repeat Simple_repeat 1 26 0 717 256 24 43 chr5 88894060 88894271 -110735879 + MIR SINE MIR 1 207 -55 220 213 0 0 chr5 88894606 88894653 -110735497 - L2 LINE L2 0 3313 3267 468 257 109 28 chr5 88895744 88895988 -110734162 - MLT1H1 LTR MaLR 0 555 286 212 163 0 20 chr5 88896016 88896065 -110734085 + CT-rich Low_complexity Low_complexity 3 50 0 931 255 59 5 chr5 88896099 88896380 -110733770 - MLT1H1 LTR MaLR -298 292 2 931 254 18 5 chr5 88897076 88897296 -110732854 - MLT1H1 LTR MaLR -11 544 322 2583 43 0 0 chr5 88897334 88897634 -110732516 - AluY SINE Alu -11 300 1 180 0 0 0 chr5 88898110 88898130 -110732020 + (A)n Simple_repeat Simple_repeat 1 20 0 438 218 13 0 chr5 88898331 88898409 -110731741 - MER90 LTR ERV1 -2 612 534 1263 221 82 0 chr5 88898464 88898767 -110731383 - MER90 LTR ERV1 -242 333 6 2224 61 44 10 chr5 88900066 88900363 -110729787 + AluSx SINE Alu 1 307 -5 504 275 190 14 chr5 88901026 88901237 -110728913 - MIR SINE MIR 0 262 15 409 191 36 12 chr5 88901541 88901625 -110728525 + MER20 DNA MER1_type 1 86 -133 2025 116 0 11 chr5 88903355 88903640 -110726510 + AluSc SINE Alu 1 282 -27 1035 222 144 41 chr5 88904014 88904383 -110725767 - MLT2D LTR ERVL -7 407 1 2043 127 13 3 chr5 88904855 88905162 -110724988 + AluSg SINE Alu 1 310 0 1134 204 106 11 chr5 88905516 88905790 -110724360 - AluJo SINE Alu -2 300 1 291 250 38 0 chr5 88906694 88906774 -110723376 - MLT1L LTR MaLR -532 83 1 337 288 129 7 chr5 88907366 88907505 -110722645 + MLT1I LTR MaLR 244 399 -10 268 284 57 0 chr5 88908111 88908199 -110721951 + L2 LINE L2 3220 3312 -1 267 206 27 27 chr5 88908536 88908609 -110721541 + MER116 DNA Mariner 2 74 -6 693 219 62 40 chr5 88910134 88910358 -110719792 - L1ME2 LINE L1 -13 6151 5923 22 0 0 0 chr5 88910358 88910380 -110719770 + AT_rich Low_complexity Low_complexity 1 22 0 206 354 81 10 chr5 88910686 88910785 -110719365 + L2 LINE L2 3163 3268 -4 231 36 0 0 chr5 88912050 88912078 -110718072 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 447 19 0 0 chr5 88912077 88912129 -110718021 + (GA)n Simple_repeat Simple_repeat 2 53 0 310 107 18 89 chr5 88912129 88912185 -110717965 - Alu SINE Alu -29 271 227 1056 259 93 71 chr5 88912274 88912642 -110717508 - L2 LINE L2 -382 2932 2550 1769 216 111 27 chr5 88912642 88912696 -110717454 - MLT2B1 LTR ERVL 0 520 472 614 13 13 0 chr5 88912696 88912771 -110717379 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 1769 216 111 27 chr5 88912771 88913194 -110716956 - MLT2B1 LTR ERVL -48 472 3 1056 259 93 71 chr5 88913194 88913288 -110716862 - L2 LINE L2 -764 2550 2460 249 270 63 36 chr5 88913290 88913401 -110716749 - MIR SINE MIR -113 149 36 2374 87 0 0 chr5 88914327 88914637 -110715513 + AluY SINE Alu 1 310 -1 394 167 56 0 chr5 88915130 88915202 -110714948 + MSTC LTR MaLR 1 76 -352 * 415 143 0 0 chr5 88915200 88915263 -110714887 - MSTC LTR MaLR -365 63 1 * 1322 240 135 36 chr5 88915263 88915654 -110714496 - LTR68 LTR ERV1 -310 430 1 296 261 81 125 chr5 88915665 88915960 -110714190 - MLT1I LTR MaLR -38 371 90 1858 190 25 6 chr5 88916227 88916585 -110713565 - MLT1A1 LTR MaLR 0 365 1 2347 93 0 0 chr5 88916608 88916908 -110713242 + AluY SINE Alu 1 300 -11 3179 219 12 6 chr5 88917284 88917933 -110712217 + MER82 DNA MER2_type 1 653 0 418 300 21 29 chr5 88917995 88918135 -110712015 + L3 LINE CR1 1438 1576 -1 231 36 0 0 chr5 88918544 88918572 -110711578 + (CA)n Simple_repeat Simple_repeat 1 28 0 375 23 0 0 chr5 88918613 88918657 -110711493 + (CA)n Simple_repeat Simple_repeat 1 44 0 200 378 51 0 chr5 88918820 88918918 -110711232 + L2 LINE L2 3202 3304 -9 1597 168 47 10 chr5 88918942 88919239 -110710911 + AluJo SINE Alu 1 308 -4 507 196 72 29 chr5 88919465 88919603 -110710547 + MLT1F1 LTR MaLR 1 144 -451 670 254 96 39 chr5 88919634 88920010 -110710140 + MLT1F1 LTR MaLR 152 553 -14 765 282 245 20 chr5 88923159 88923946 -110706204 + L2 LINE L2 2184 3196 -117 353 280 40 32 chr5 88923950 88924075 -110706075 - MIR3 SINE MIR -23 185 60 1707 183 169 0 chr5 88925283 88925649 -110704501 + MSTA LTR MaLR 1 428 0 9439 163 13 15 chr5 88925649 88927303 -110702847 + MSTA-int LTR MaLR 1 1651 0 1942 199 81 2 chr5 88927303 88927700 -110702450 + MSTA LTR MaLR 1 428 0 182 296 39 90 chr5 88927850 88928083 -110702067 - L2 LINE L2 -179 3093 2873 557 355 134 8 chr5 88928141 88928626 -110701524 - L2 LINE L2 -534 2780 2235 487 309 0 8 chr5 88929416 88929542 -110700608 - L2 LINE L2 -4 3309 3185 667 147 22 96 chr5 88929856 88929992 -110700158 + FLAM_A SINE Alu 1 126 -7 327 229 25 16 chr5 88930070 88930192 -110699958 + L1MC4 LINE L1 7128 7250 -792 263 320 10 10 chr5 88930212 88930312 -110699838 + L1MC4 LINE L1 7358 7457 -585 444 299 58 48 chr5 88930369 88930867 -110699283 + L1MC5 LINE L1 7313 7815 -146 1615 192 3 25 chr5 88932437 88932754 -110697396 + AluJo SINE Alu 1 310 -2 248 257 110 9 chr5 88932799 88932908 -110697242 + L1ME1 LINE L1 4792 4911 -1235 2876 217 55 31 chr5 88932921 88934035 -110696115 + L1ME1 LINE L1 4973 6128 -38 234 263 53 18 chr5 88934382 88934439 -110695711 - MER5A DNA MER1_type -81 108 50 288 0 0 0 chr5 88935267 88935299 -110694851 + (CA)n Simple_repeat Simple_repeat 2 33 0 30 27 0 0 chr5 88936759 88936796 -110693354 + AT_rich Low_complexity Low_complexity 1 37 0 2494 65 0 0 chr5 88936803 88937112 -110693038 + AluY SINE Alu 1 309 -2 279 0 0 0 chr5 88937112 88937143 -110693007 + (TA)n Simple_repeat Simple_repeat 1 31 0 513 248 61 0 chr5 88937160 88937350 -110692800 + L1ME1 LINE L1 5651 5860 -304 428 255 54 16 chr5 88937437 88937621 -110692529 - L1MC/D LINE L1 -2320 5488 5298 459 297 79 84 chr5 88937750 88938309 -110691841 - L1MC/D LINE L1 -1022 5124 4569 19396 140 21 10 chr5 88940393 88944504 -110685646 - L1PA11 LINE L1 -2 6172 2028 751 122 0 0 chr5 88944504 88944611 -110685539 - U6 snRNA snRNA 0 107 1 359 216 102 0 chr5 88945576 88945664 -110684486 + Charlie2 DNA MER1_type 54 150 -2632 354 284 17 0 chr5 88945732 88945848 -110684302 + Charlie2 DNA MER1_type 1896 2013 -849 273 149 179 0 chr5 88945911 88945978 -110684172 + Charlie2 DNA MER1_type 2534 2612 -250 2072 68 89 0 chr5 88946778 88947058 -110683092 + AluSx SINE Alu 1 305 -7 928 296 53 24 chr5 88947374 88947752 -110682398 + MLT1I LTR MaLR 1 389 -20 397 222 26 51 chr5 88947872 88947989 -110682161 - L2 LINE L2 -8 3264 3151 * 427 328 61 88 chr5 88947978 88948240 -110681910 - L3 LINE CR1 -1287 290 36 429 192 0 160 chr5 88949606 88949762 -110680388 - MER45A DNA AcHobo 0 178 48 220 306 16 0 chr5 88949786 88949848 -110680302 - MER5A DNA MER1_type -74 115 53 1884 173 46 0 chr5 88950195 88950518 -110679632 + MER7A DNA MER2_type 1 336 -10 30 0 0 0 chr5 88950767 88950797 -110679353 + AT_rich Low_complexity Low_complexity 1 30 0 3619 178 56 50 chr5 88951243 88952088 -110678062 + MER21A LTR ERV1 16 912 -19 1039 78 35 0 chr5 88952284 88952425 -110677725 - MLT2A2 LTR ERVL 0 453 308 * 1241 65 0 0 chr5 88952423 88952577 -110677573 + THE1C LTR MaLR 222 375 0 6469 128 37 10 chr5 88954589 88956033 -110674117 + L1MA3 LINE L1 4823 6305 0 22 0 0 0 chr5 88956033 88956055 -110674095 + AT_rich Low_complexity Low_complexity 1 22 0 2041 172 11 3 chr5 88956687 88957035 -110673115 - LTR57 LTR ERVL 0 411 61 25 0 0 0 chr5 88957149 88957174 -110672976 + AT_rich Low_complexity Low_complexity 1 25 0 288 302 47 23 chr5 88959368 88959497 -110670653 + MIR3 SINE MIR 13 144 -64 224 314 0 0 chr5 88959530 88959581 -110670569 - MIR3 SINE MIR -48 160 110 1656 156 0 57 chr5 88960173 88960487 -110669663 - AluJb SINE Alu -16 296 1 608 307 119 23 chr5 88962644 88963115 -110667035 + L2 LINE L2 2648 3171 -142 798 290 125 48 chr5 88963289 88963976 -110666174 - L2 LINE L2 -16 3297 2532 530 15 15 0 chr5 88964378 88964445 -110665705 + (TA)n Simple_repeat Simple_repeat 2 69 0 23 0 0 0 chr5 88964903 88964926 -110665224 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr5 88965653 88965676 -110664474 + (TTATA)n Simple_repeat Simple_repeat 4 26 0 1970 184 19 3 chr5 88965878 88966237 -110663913 + MLT1A1 LTR MaLR 1 365 0 249 309 145 40 chr5 88966237 88966389 -110663761 + MIR SINE MIR 51 218 -44 439 368 90 4 chr5 88966446 88966680 -110663470 + MIR SINE MIR 8 261 -1 28 71 0 0 chr5 88966812 88966868 -110663282 + AT_rich Low_complexity Low_complexity 1 56 0 2107 149 77 19 chr5 88966920 88967349 -110662801 + L1MA8 LINE L1 5831 6284 -7 509 322 28 6 chr5 88967453 88967630 -110662520 + L3 LINE CR1 1393 1573 -4 312 280 32 11 chr5 88967644 88967737 -110662413 + L3 LINE CR1 948 1042 -535 905 207 122 33 chr5 88967773 88968204 -110661946 - MER69 DNA AcHobo -3 2523 2024 1038 246 166 6 chr5 88968254 88968615 -110661535 - MER69 DNA AcHobo -798 428 10 1310 288 35 16 chr5 88968667 88969039 -110661111 + L3 LINE CR1 1165 1543 -34 370 259 315 5 chr5 88969474 88969671 -110660479 + MIR SINE MIR 2 259 -3 474 183 153 8 chr5 88970781 88970912 -110659238 - MLT1K LTR MaLR 0 588 439 795 244 39 6 chr5 88971168 88971348 -110658802 - MER5A DNA MER1_type -3 186 1 408 274 53 9 chr5 88971912 88972025 -110658125 + MER5B DNA MER1_type 7 124 -54 11594 177 48 31 chr5 88973445 88974269 -110655881 - Tigger4(Zombi) DNA MER2_type 0 2731 1923 2337 84 0 0 chr5 88974269 88974579 -110655571 - AluY SINE Alu -1 310 1 11594 177 48 31 chr5 88974579 88976435 -110653715 - Tigger4(Zombi) DNA MER2_type -808 1923 4 1157 152 35 26 chr5 88978954 88979185 -110650965 + Tigger1 DNA MER2_type 2186 2418 0 30 27 0 0 chr5 88982558 88982595 -110647555 + AT_rich Low_complexity Low_complexity 1 37 0 241 289 0 0 chr5 88983029 88983081 -110647069 - MIR SINE MIR -5 257 206 197 32 0 32 chr5 88983794 88983825 -110646325 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 180 309 113 62 chr5 88984897 88984994 -110645156 + MIR SINE MIR 46 147 -115 3836 31 0 0 chr5 88985694 88986142 -110644008 + L1PA3 LINE L1 5695 6142 -13 2085 29 0 0 chr5 88986142 88986169 -110643981 + L1PA4 LINE L1 5695 6169 0 5815 105 22 13 chr5 88986818 88988221 -110641929 - L1PA11 LINE L1 -2 6172 4771 2490 103 43 0 chr5 88988338 88988687 -110641463 - THE1B LTR MaLR 0 364 1 275 288 144 0 chr5 88991057 88991189 -110638961 + MIR SINE MIR 82 232 -30 21 0 0 0 chr5 88991529 88991550 -110638600 + AT_rich Low_complexity Low_complexity 1 21 0 203 184 0 0 chr5 88992092 88992130 -110638020 + L2 LINE L2 3276 3313 0 220 242 61 30 chr5 88992802 88992901 -110637249 + L2 LINE L2 3117 3218 -95 2115 129 35 27 chr5 88993825 88994197 -110635953 + THE1C LTR MaLR 1 375 0 307 125 0 111 chr5 88995071 88995143 -110635007 - L1MC4 LINE L1 -1339 6703 6640 611 181 181 13 chr5 88997341 88997496 -110632654 - MER5A DNA MER1_type 0 189 9 236 236 67 45 chr5 88997711 88997800 -110632350 - L2 LINE L2 -42 3230 3140 337 266 11 0 chr5 88998108 88998202 -110631948 + MARNA DNA Mariner 140 234 -352 1514 195 14 14 chr5 88998706 88998998 -110631152 - AluJb SINE Alu -20 292 1 222 323 247 0 chr5 88999075 88999168 -110630982 + L2 LINE L2 3147 3262 -10 238 325 0 44 chr5 88999587 88999701 -110630449 + CT-rich Low_complexity Low_complexity 2 110 0 5236 23 2 0 chr5 89000315 89000928 -110629222 - L1PA3 LINE L1 0 6155 5542 311 253 280 13 chr5 89000954 89001104 -110629046 + MIR SINE MIR 15 204 -58 463 128 20 69 chr5 89002652 89002754 -110627396 - L1MA7 LINE L1 0 6291 6195 308 291 109 43 chr5 89002966 89003176 -110626974 - L1MC4a LINE L1 -1732 6076 5853 266 295 110 48 chr5 89003198 89003382 -110626768 - L1MC4a LINE L1 -2026 5782 5580 1275 170 129 44 chr5 89003382 89003699 -110626451 + MER2 DNA MER2_type 1 344 0 266 295 110 48 chr5 89003699 89003741 -110626409 - L1MC4a LINE L1 -2228 5580 5542 2134 162 72 8 chr5 89003797 89004199 -110625951 - MSTA LTR MaLR 0 428 1 2112 125 10 3 chr5 89004709 89005020 -110625130 - AluSp SINE Alu 0 313 1 5069 121 51 70 chr5 89005487 89005751 -110624399 - L1MA4A LINE L1 -5 7360 7092 2480 57 0 0 chr5 89005751 89006052 -110624098 - AluY SINE Alu -10 301 1 5069 121 51 70 chr5 89006052 89006260 -110623890 - L1MA4A LINE L1 -273 7092 6882 2294 76 3 3 chr5 89006260 89006577 -110623573 + AluY SINE Alu 1 317 0 5069 121 51 70 chr5 89006577 89007149 -110623001 - L1MA4A LINE L1 -483 6882 6334 41151 64 5 2 chr5 89007194 89013323 -110616827 - L1PA5 LINE L1 0 6154 1 9545 204 35 27 chr5 89013324 89015814 -110614336 - L1MA4A LINE L1 -866 6342 3833 2166 190 16 7 chr5 89015828 89016322 -110613828 + L1PA15 LINE L1 4808 5307 -848 4851 149 20 6 chr5 89016403 89017237 -110612913 + L1PA15 LINE L1 5314 6159 -6 * 1435 195 6 80 chr5 89017237 89017550 -110612600 - AluJo SINE Alu -22 290 1 5221 171 15 45 chr5 89017550 89019179 -110610971 - L1MA4A LINE L1 -3359 3849 2255 3327 139 33 4 chr5 89019179 89019691 -110610459 - MER1A DNA MER1_type 0 527 1 5221 171 15 45 chr5 89019691 89019741 -110610409 - L1MA4A LINE L1 -4953 2255 2205 3723 233 18 14 chr5 89019731 89020592 -110609558 - L1MA4A LINE L1 -6145 1064 2 * 363 89 0 0 chr5 89020838 89020894 -110609256 + (GA)n Simple_repeat Simple_repeat 1 56 0 1769 190 68 77 chr5 89022015 89022472 -110607678 - MLT1C LTR MaLR 0 467 15 730 220 61 23 chr5 89022491 89022855 -110607295 + LTR16A1 LTR ERVL 1 418 -39 1621 207 51 53 chr5 89022855 89023138 -110607012 + MLT1D LTR MaLR 1 284 -221 2205 136 70 36 chr5 89023138 89023505 -110606645 + MSTB LTR MaLR 1 385 -41 2175 123 0 3 chr5 89023505 89023798 -110606352 - AluSq SINE Alu -21 292 1 2205 136 70 36 chr5 89023798 89023842 -110606308 + MSTB LTR MaLR 385 426 0 1621 207 51 53 chr5 89023842 89024031 -110606119 + MLT1D LTR MaLR 284 472 -33 316 308 192 19 chr5 89024160 89024374 -110605776 + MIR SINE MIR 8 258 -4 206 325 50 25 chr5 89024709 89024789 -110605361 + MER5A DNA MER1_type 7 88 -101 32 57 0 0 chr5 89025175 89025228 -110604922 + AT_rich Low_complexity Low_complexity 1 53 0 37 62 0 0 chr5 89025534 89025599 -110604551 + AT_rich Low_complexity Low_complexity 1 65 0 520 304 35 18 chr5 89027048 89027219 -110602931 - MER5A DNA MER1_type -1 188 15 520 304 35 18 chr5 89028202 89028373 -110601777 - MER5A DNA MER1_type -1 188 15 1017 301 106 10 chr5 89031276 89031722 -110598428 - MLT1H LTR MaLR -3 546 14 2106 70 16 79 chr5 89032845 89033160 -110596990 - AluY SINE Alu -16 295 1 1103 150 12 0 chr5 89034576 89034749 -110595401 - AluSg/x SINE Alu -8 304 130 42 36 0 0 chr5 89034750 89034806 -110595344 + AT_rich Low_complexity Low_complexity 1 56 0 18790 33 1 2 chr5 89034806 89038062 -110592088 - L1PA3 LINE L1 -2 6153 2902 819 144 0 0 chr5 89038062 89038173 -110591977 - AluSq/x SINE Alu -197 116 6 271 378 22 17 chr5 89040122 89040302 -110589848 - L2 LINE L2 -581 2733 2553 3230 107 15 2 chr5 89040851 89041329 -110588821 - L1PB1 LINE L1 0 6151 5668 2001 148 10 0 chr5 89041561 89041864 -110588286 - AluSx SINE Alu -6 306 1 303 323 0 53 chr5 89042056 89042170 -110587980 + MIR SINE MIR 27 140 -68 371 215 13 13 chr5 89042227 89042306 -110587844 + MER63 DNA MER1_type 979 1057 -4 2548 124 45 38 chr5 89043136 89043579 -110586571 + MER83 LTR ERV1 3 448 0 327 217 61 26 chr5 89044585 89044700 -110585450 + LTR37B LTR ERV1 6 124 -344 216 200 0 0 chr5 89044971 89045016 -110585134 + (TA)n Simple_repeat Simple_repeat 2 46 0 1759 181 4 0 chr5 89045081 89045362 -110584788 + AluJb SINE Alu 1 282 -30 198 244 0 0 chr5 89046285 89046326 -110583824 + L2 LINE L2 3265 3305 -8 587 132 47 39 chr5 89047011 89047140 -110583010 - L1MA9 LINE L1 -157 6155 6026 258 266 138 28 chr5 89047355 89047464 -110582686 - MIR SINE MIR -64 144 24 3976 154 15 34 chr5 89047471 89048212 -110581938 - LTR8A LTR ERV1 0 727 1 208 278 113 87 chr5 89048530 89048645 -110581505 - MIR SINE MIR -62 146 29 191 396 30 10 chr5 89049202 89049303 -110580847 + MIR3 SINE MIR 54 156 -52 5029 177 81 0 chr5 89051300 89052215 -110577935 - MSTA-int LTR MaLR -662 989 1 2536 140 39 5 chr5 89052215 89052629 -110577521 - MSTA LTR MaLR 0 428 1 966 197 5 21 chr5 89052630 89052823 -110577327 - L1M3 LINE L1 -411 5757 5568 304 316 21 0 chr5 89052859 89052954 -110577196 - MIR SINE MIR -119 143 47 2184 126 0 3 chr5 89053023 89053349 -110576801 - AluSc SINE Alu 0 325 1 555 283 45 47 chr5 89053476 89053866 -110576284 - MER57A LTR ERV1 0 403 44 362 368 38 8 chr5 89054390 89054523 -110575627 + L2 LINE L2 3136 3272 0 33615 109 11 32 chr5 89054889 89061162 -110568988 - L1PA7 LINE L1 -5 6149 12 527 239 125 22 chr5 89061458 89061588 -110568562 + MER3 DNA MER1_type 2 158 -51 180 0 0 0 chr5 89061588 89061608 -110568542 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 527 239 125 22 chr5 89061608 89061661 -110568489 + MER3 DNA MER1_type 158 204 -5 198 0 0 0 chr5 89061679 89061701 -110568449 + (TA)n Simple_repeat Simple_repeat 2 23 0 5354 172 11 21 chr5 89061701 89062811 -110567339 - L1 LINE L1 -841 5305 4207 1992 134 3 0 chr5 89062853 89063165 -110566985 - AluSx SINE Alu 0 313 1 5388 153 20 16 chr5 89063165 89064124 -110566026 + L1MA4 LINE L1 5335 6297 -3 498 282 116 47 chr5 89064378 89064889 -110565261 - L1MEd LINE L1 -867 1623 976 198 0 0 0 chr5 89065123 89065145 -110565005 + (TTTTTA)n Simple_repeat Simple_repeat 3 24 0 621 266 36 126 chr5 89065790 89066178 -110563972 - MLT1A1 LTR MaLR -12 353 1 21 57 0 0 chr5 89066196 89066231 -110563919 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 89066772 89066793 -110563357 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 89067655 89067690 -110562460 + AT_rich Low_complexity Low_complexity 1 35 0 323 179 26 34 chr5 89068189 89068306 -110561844 + (TATG)n Simple_repeat Simple_repeat 1 116 0 423 0 0 0 chr5 89069262 89069309 -110560841 + (CA)n Simple_repeat Simple_repeat 2 48 0 2191 101 7 0 chr5 89070068 89070354 -110559796 - AluSg SINE Alu -21 289 2 262 262 0 0 chr5 89070736 89070797 -110559353 - MER92C LTR ERV1 -3 551 491 258 261 45 0 chr5 89071473 89071561 -110558589 + L1MEd LINE L1 925 1016 -5103 2152 65 61 0 chr5 89071673 89071989 -110558161 + AluSp SINE Alu 1 333 0 308 280 206 28 chr5 89072004 89072290 -110557860 + HAL1 LINE L1 1297 1633 -874 1324 229 43 24 chr5 89072772 89073147 -110557003 - L1MC4a LINE L1 -111 7697 7316 1239 170 170 4 chr5 89073147 89073417 -110556733 + MER7A DNA MER2_type 2 314 -32 5824 220 65 43 chr5 89073446 89075486 -110554664 - L1MC4a LINE L1 -700 7108 5024 1437 81 25 0 chr5 89076234 89076432 -110553718 - L1PA7 LINE L1 0 6154 5952 2141 257 54 48 chr5 89076652 89078211 -110551939 - L1MC4a LINE L1 -869 5277 4490 1437 81 25 0 chr5 89078238 89078436 -110551714 - L1PA7 LINE L1 0 6154 5952 281 269 0 51 chr5 89078555 89078727 -110551423 - MIR SINE MIR -32 230 11 2030 155 60 0 chr5 89079014 89079350 -110550800 + MSTB1 LTR MaLR 76 431 -1 228 213 16 16 chr5 89080526 89080587 -110549563 + GA-rich Low_complexity Low_complexity 3 63 0 316 274 107 71 chr5 89082012 89082153 -110547997 - MIR3 SINE MIR -3 205 56 1909 79 23 0 chr5 89082153 89082418 -110547732 - L1PA13 LINE L1 -1 6162 5892 316 274 107 71 chr5 89082418 89082444 -110547706 - MIR3 SINE MIR -152 56 32 399 192 48 29 chr5 89083199 89083303 -110546847 + MIR SINE MIR 48 153 -109 1106 113 4 22 chr5 89083390 89083576 -110546574 - MER34B LTR ERV1 -395 170 1 29 0 0 0 chr5 89083584 89083613 -110546537 + AT_rich Low_complexity Low_complexity 1 29 0 321 376 43 0 chr5 89083730 89083871 -110546279 + L2 LINE L2 3126 3272 0 25 31 0 0 chr5 89083877 89083909 -110546241 + AT_rich Low_complexity Low_complexity 1 32 0 185 330 57 11 chr5 89085058 89085146 -110545004 - MIR SINE MIR -112 150 59 1330 223 223 1 chr5 89087126 89087519 -110542631 - MLT1F1 LTR MaLR -14 553 53 374 167 45 0 chr5 89087543 89087609 -110542541 - MER8 DNA MER2_type -1 238 170 274 216 0 0 chr5 89087751 89087802 -110542348 - MER2 DNA MER2_type -267 78 28 30 59 0 0 chr5 89087809 89087860 -110542290 + AT_rich Low_complexity Low_complexity 1 51 0 402 252 228 0 chr5 89088228 89088351 -110541799 - MER5A DNA MER1_type -30 159 9 180 0 0 0 chr5 89088792 89088812 -110541338 + (CATGC)n Simple_repeat Simple_repeat 5 24 0 1111 265 90 67 chr5 89089904 89090428 -110539722 - MER21B LTR ERV1 -196 667 132 364 269 8 46 chr5 89090471 89090601 -110539549 - MER77 LTR ERV1 -417 188 64 6208 162 29 23 chr5 89092255 89093692 -110536458 + L1MA4 LINE L1 4122 5583 -717 2200 117 10 0 chr5 89093692 89094001 -110536149 + AluSx SINE Alu 1 312 0 6208 162 29 23 chr5 89094001 89094721 -110535429 + L1MA4 LINE L1 5583 6297 -3 247 213 32 0 chr5 89096061 89096155 -110533995 + (CATA)n Simple_repeat Simple_repeat 2 98 0 245 200 0 0 chr5 89096211 89096256 -110533894 - MIR SINE MIR -34 228 184 523 214 0 0 chr5 89096311 89096409 -110533741 - AluJb SINE Alu -25 287 190 495 183 206 0 chr5 89096938 89097069 -110533081 - MER20 DNA MER1_type -61 158 1 190 343 0 0 chr5 89097957 89098030 -110532120 + L3 LINE CR1 400 472 -1105 1271 194 50 12 chr5 89098069 89098327 -110531823 + L1MC1 LINE L1 6066 6333 0 922 311 121 30 chr5 89098445 89099049 -110531101 + L3 LINE CR1 630 1288 -289 969 245 21 9 chr5 89099786 89100019 -110530131 - L1MB1 LINE L1 0 6168 5933 224 196 22 0 chr5 89101468 89101514 -110528636 - L2 LINE L2 -6 3307 3261 388 281 120 6 chr5 89101766 89101933 -110528217 + MIR SINE MIR 11 196 -66 2553 46 0 0 chr5 89102391 89102698 -110527452 - AluY SINE Alu -4 307 1 2436 57 7 0 chr5 89102862 89103159 -110526991 + AluSp SINE Alu 4 302 -11 230 88 0 0 chr5 89103164 89103198 -110526952 - HSMAR1 DNA Mariner -1253 34 1 1010 327 53 30 chr5 89103913 89104549 -110525601 + L1MC4a LINE L1 5255 5905 -1903 285 233 31 94 chr5 89104770 89104929 -110525221 + L1ME4a LINE L1 5973 6121 0 204 97 0 0 chr5 89105075 89105106 -110525044 + (T)n Simple_repeat Simple_repeat 1 31 0 569 74 0 0 chr5 89105143 89105224 -110524926 - L1PA13 LINE L1 -3 6160 6080 6428 25 8 0 chr5 89105224 89105979 -110524171 - L1PA4 LINE L1 -3 6152 5392 3336 32 1 0 chr5 89105976 89106406 -110523744 + L1P LINE L1 4978 5411 -740 * 187 292 62 0 chr5 89106614 89106662 -110523488 - L2 LINE L2 -6 3266 3216 201 360 110 30 chr5 89106793 89106993 -110523157 - L2 LINE L2 -166 3106 2891 257 261 90 54 chr5 89107040 89107151 -110522999 + L2 LINE L2 3136 3250 -22 22 0 0 0 chr5 89107428 89107450 -110522700 + AT_rich Low_complexity Low_complexity 1 22 0 719 279 142 16 chr5 89107455 89107942 -110522208 - HAL1 LINE L1 -322 2185 1638 5699 228 65 15 chr5 89107942 89109997 -110520153 - L1ME LINE L1 -529 5706 3549 1140 117 15 10 chr5 89110301 89110497 -110519653 - L1MA4A LINE L1 -205 6098 5902 272 298 32 0 chr5 89110504 89110628 -110519522 - L1ME LINE L1 -2799 3416 3289 235 195 0 0 chr5 89110807 89110848 -110519302 - HAL1 LINE L1 -1618 889 849 657 203 0 0 chr5 89111203 89111321 -110518829 - Tigger1 DNA MER2_type 0 2418 2301 1128 173 9 42 chr5 89111322 89111536 -110518614 + AluJb SINE Alu 87 293 -19 12217 132 42 51 chr5 89111536 89113843 -110516307 - Tigger1 DNA MER2_type -109 2309 25 239 324 121 6 chr5 89113954 89114127 -110516023 - HAL1 LINE L1 -2313 194 2 28 29 0 0 chr5 89114516 89114551 -110515599 + AT_rich Low_complexity Low_complexity 1 35 0 1318 213 9 60 chr5 89115449 89115764 -110514386 + AluJb SINE Alu 1 299 -13 948 196 6 0 chr5 89115926 89116094 -110514056 - FAM SINE Alu -5 44 1 21 0 0 0 chr5 89116683 89116704 -110513446 + AT_rich Low_complexity Low_complexity 1 21 0 545 245 12 61 chr5 89116717 89116880 -110513270 - L2 LINE L2 -1 3312 3158 21 57 0 0 chr5 89116887 89116922 -110513228 + AT_rich Low_complexity Low_complexity 1 35 0 1880 298 37 29 chr5 89117079 89117996 -110512154 - L1ME LINE L1 -5454 942 19 225 0 0 0 chr5 89118618 89118643 -110511507 + (T)n Simple_repeat Simple_repeat 1 25 0 1330 184 78 105 chr5 89119206 89119520 -110510630 - MLT1C LTR MaLR -2 465 167 1728 178 3 7 chr5 89119520 89119807 -110510343 - AluJo SINE Alu -25 287 2 1330 184 78 105 chr5 89119807 89119969 -110510181 - MLT1C LTR MaLR -300 167 2 2063 148 33 6 chr5 89120036 89120401 -110509749 - L1PA16 LINE L1 -5 6161 5787 526 298 13 19 chr5 89120557 89120715 -110509435 - MIR SINE MIR -93 169 13 570 179 76 21 chr5 89120715 89120860 -110509290 - Charlie4a DNA MER1_type -2 506 354 275 173 53 27 chr5 89120885 89120960 -110509190 - MER116 DNA Mariner -3 77 1 * 1075 205 93 0 chr5 89120960 89121227 -110508923 - Charlie4a DNA MER1_type -175 333 42 749 270 28 24 chr5 89122692 89122903 -110507247 + MIR SINE MIR 51 262 0 2299 62 3 7 chr5 89123180 89123471 -110506679 + AluY SINE Alu 1 290 -21 365 328 102 51 chr5 89123857 89124037 -110506113 - L2 LINE L2 -926 2388 2219 1063 240 20 86 chr5 89124037 89124433 -110505717 - MLT1A2 LTR MaLR -4 370 1 365 328 102 51 chr5 89124433 89124599 -110505551 - L2 LINE L2 -1095 2219 2013 2756 13 0 0 chr5 89124599 89124908 -110505242 + AluY SINE Alu 1 309 -2 365 328 102 51 chr5 89124908 89124993 -110505157 - L2 LINE L2 -1301 2013 1934 1686 178 13 22 chr5 89125013 89125327 -110504823 + AluJo SINE Alu 1 311 -1 239 374 24 0 chr5 89125711 89125794 -110504356 - MIR SINE MIR -78 130 46 528 16 0 0 chr5 89126313 89126374 -110503776 + (TAG)n Simple_repeat Simple_repeat 2 62 0 376 233 128 0 chr5 89126418 89126504 -110503646 + MER5A DNA MER1_type 93 189 0 1934 88 7 11 chr5 89126925 89127208 -110502942 - L1PA14 LINE L1 -3 7596 7315 532 138 43 0 chr5 89127215 89127309 -110502841 + AluJ/FRAM SINE Alu 214 311 -1 11379 206 118 19 chr5 89127557 89128438 -110501712 - L1PA14 LINE L1 -302 7297 6505 3818 33 26 0 chr5 89128438 89128929 -110501221 + L1PA4 LINE L1 5649 6152 -3 11379 206 118 19 chr5 89128929 89132464 -110497686 - L1PA14 LINE L1 -1094 6505 2386 7266 144 14 24 chr5 89132566 89133799 -110496351 - L1PA14 LINE L1 -5219 2362 1143 327 39 0 116 chr5 89185009 89185164 -110444986 + (TA)n Simple_repeat Simple_repeat 2 138 0 187 96 24 96 chr5 89185190 89185357 -110444793 + (TA)n Simple_repeat Simple_repeat 1 155 0 426 37 31 94 chr5 89185391 89185582 -110444568 + (TA)n Simple_repeat Simple_repeat 1 179 0 199 103 82 31 chr5 89185615 89185712 -110444438 + (CTATA)n Simple_repeat Simple_repeat 2 103 0 210 113 84 42 chr5 89185731 89185802 -110444348 + (CTATA)n Simple_repeat Simple_repeat 2 75 0 261 84 31 94 chr5 89185805 89185996 -110444154 + (TA)n Simple_repeat Simple_repeat 1 179 0 308 390 17 17 chr5 89186247 89186365 -110443785 + MIR SINE MIR 8 125 -137 646 193 8 0 chr5 89188364 89188483 -110441667 - FLAM_A SINE Alu -13 120 1 222 376 128 0 chr5 89189433 89189582 -110440568 - MIR3 SINE MIR -29 179 12 354 151 0 0 chr5 89189606 89189679 -110440471 + CT-rich Low_complexity Low_complexity 1 73 0 415 101 0 14 chr5 89189824 89189893 -110440257 - L1PA4 LINE L1 -1264 4882 4815 7459 26 8 6 chr5 89189893 89191160 -110438990 + L1PA4 LINE L1 4887 6155 0 22 0 0 0 chr5 89191160 89191182 -110438968 + AT_rich Low_complexity Low_complexity 1 22 0 197 163 20 0 chr5 89191744 89191793 -110438357 + (TA)n Simple_repeat Simple_repeat 2 51 0 1119 179 0 6 chr5 89191864 89192068 -110438082 - AluSg/x SINE Alu 0 308 106 194 385 21 0 chr5 89192437 89192533 -110437617 - MIR SINE MIR -63 145 48 2740 13 0 0 chr5 89195329 89195628 -110434522 - AluY SINE Alu -12 299 1 23 0 0 0 chr5 89195630 89195653 -110434497 + AT_rich Low_complexity Low_complexity 1 23 0 1863 156 7 7 chr5 89196354 89196683 -110433467 - AluSx SINE Alu 0 312 1 414 0 0 0 chr5 89197366 89197412 -110432738 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 592 254 0 0 chr5 89198596 89198714 -110431436 + MER45A DNA AcHobo 61 178 0 180 0 0 0 chr5 89198883 89198903 -110431247 + (A)n Simple_repeat Simple_repeat 1 20 0 516 233 158 0 chr5 89199748 89199894 -110430256 - MIR SINE MIR -6 256 88 505 133 0 0 chr5 89199995 89200070 -110430080 - AluJ/FLAM SINE Alu -237 75 1 25 51 0 0 chr5 89200220 89200259 -110429891 + AT_rich Low_complexity Low_complexity 1 39 0 2147 132 22 24 chr5 89200938 89201308 -110428842 + THE1C LTR MaLR 5 373 -2 1298 237 92 119 chr5 89201468 89202034 -110428116 - L1ME3A LINE L1 -8 6162 5629 12184 184 24 5 chr5 89202034 89205328 -110424822 - L1PA15 LINE L1 -5 6160 2814 1298 237 92 119 chr5 89205328 89205686 -110424464 - L1ME3A LINE L1 -541 5629 5263 * 5708 162 34 9 chr5 89205682 89206680 -110423470 - L1MA4A LINE L1 -3 7002 5964 270 56 0 0 chr5 89206680 89206716 -110423434 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 5708 162 34 9 chr5 89206716 89207320 -110422830 - L1MA4A LINE L1 -1041 5964 5376 2836 202 19 0 chr5 89207338 89207854 -110422296 - L1MA4A LINE L1 -6321 528 3 1144 257 111 14 chr5 89207854 89208341 -110421809 - L1ME3A LINE L1 -870 5276 4743 210 150 0 0 chr5 89208430 89208470 -110421680 + (TG)n Simple_repeat Simple_repeat 1 40 0 2129 140 0 0 chr5 89209026 89209333 -110420817 + AluSx SINE Alu 1 307 -5 1603 112 4 22 chr5 89209333 89209595 -110420555 + L1MA5A LINE L1 6035 6293 -4 1039 309 69 17 chr5 89209781 89210189 -110419961 - LTR16A LTR ERVL -2 448 20 584 343 14 9 chr5 89210693 89210909 -110419241 - ERVL LTR ERVL -772 4992 4776 684 246 45 5 chr5 89211030 89211229 -110418921 + L1MB7 LINE L1 5958 6183 -1 265 364 16 0 chr5 89211229 89211350 -110418800 - ERVL LTR ERVL -1120 4644 4522 2174 53 107 0 chr5 89211555 89211836 -110418314 + AluY SINE Alu 1 311 0 735 271 0 38 chr5 89211850 89212060 -110418090 - ERVL LTR ERVL -1458 4306 4105 313 333 13 19 chr5 89212272 89212428 -110417722 - ERVL LTR ERVL -1716 3769 3615 1855 239 29 18 chr5 89212541 89212985 -110417165 + L1M4 LINE L1 277 725 -5817 404 117 0 52 chr5 89213014 89213091 -110417059 + L1MB7 LINE L1 6103 6175 -9 703 228 107 61 chr5 89213139 89213402 -110416748 + L1ME3 LINE L1 5865 6139 -23 402 242 17 25 chr5 89213449 89213569 -110416581 - MER112 DNA MER1_type -137 123 5 1682 191 0 7 chr5 89213728 89214026 -110416124 + AluJb SINE Alu 1 296 -16 3939 174 27 14 chr5 89214044 89214755 -110415395 - MER72 LTR ERV1 0 722 3 2364 175 30 124 chr5 89214870 89215546 -110414604 + LTR9 LTR ERV1 1 612 0 21 36 0 0 chr5 89215780 89215808 -110414342 + AT_rich Low_complexity Low_complexity 1 28 0 261 146 0 0 chr5 89215860 89215908 -110414242 + (TATG)n Simple_repeat Simple_repeat 3 50 0 21 0 0 0 chr5 89216224 89216245 -110413905 + AT_rich Low_complexity Low_complexity 1 21 0 879 239 47 39 chr5 89217074 89217329 -110412821 - LTR40b LTR ERVL 0 462 206 2570 261 40 39 chr5 89217329 89217657 -110412493 - ERVL LTR ERVL -1338 4192 3866 1975 147 3 0 chr5 89217657 89217950 -110412200 + AluSg SINE Alu 1 294 -16 2570 261 40 39 chr5 89217950 89218363 -110411787 - ERVL LTR ERVL -1664 3866 3450 1177 266 20 39 chr5 89218382 89218993 -110411157 - ERVL LTR ERVL -2222 3308 2662 412 245 20 33 chr5 89219100 89219251 -110410899 - ERVL LTR ERVL -3936 1594 1446 780 296 28 0 chr5 89219697 89219913 -110410237 - ERVL LTR ERVL -4383 1147 926 1617 227 69 23 chr5 89220226 89220658 -110409492 - LTR40c LTR ERVL -13 452 1 688 281 45 29 chr5 89220660 89220902 -110409248 - MIR SINE MIR -10 252 7 832 165 0 0 chr5 89221427 89221554 -110408596 - FLAM_C SINE Alu -16 127 1 196 211 0 58 chr5 89221747 89221799 -110408351 - L2 LINE L2 -3 3269 3221 28 79 0 0 chr5 89221907 89221970 -110408180 + AT_rich Low_complexity Low_complexity 1 63 0 21 36 0 0 chr5 89222006 89222034 -110408116 + AT_rich Low_complexity Low_complexity 1 28 0 201 74 0 0 chr5 89222211 89222238 -110407912 + (T)n Simple_repeat Simple_repeat 1 27 0 212 244 76 46 chr5 89223697 89223828 -110406322 + MIR SINE MIR 86 220 -42 21 57 0 0 chr5 89223875 89223910 -110406240 + AT_rich Low_complexity Low_complexity 1 35 0 2031 157 0 0 chr5 89225400 89225712 -110404438 + AluSx SINE Alu 1 312 0 630 266 48 48 chr5 89225792 89226040 -110404110 + MIR SINE MIR 12 259 -3 2514 21 0 0 chr5 89226525 89226814 -110403336 + L1PA4 LINE L1 5865 6153 -2 262 330 0 37 chr5 89227182 89227291 -110402859 + LTR67 LTR ERVL 407 511 -46 1849 176 57 49 chr5 89227294 89227326 -110402824 - MLT2D LTR ERVL -8 406 376 387 60 0 0 chr5 89227326 89227376 -110402774 + (TG)n Simple_repeat Simple_repeat 2 51 0 1849 176 57 49 chr5 89227376 89227730 -110402420 - MLT2D LTR ERVL -38 376 17 309 373 76 7 chr5 89227773 89227974 -110402176 - MIR SINE MIR -50 212 2 201 311 0 0 chr5 89228683 89228728 -110401422 + L2 LINE L2 2605 2649 -665 574 364 42 11 chr5 89229054 89229318 -110400832 + L2 LINE L2 973 1244 -2070 1150 291 168 44 chr5 89229325 89230080 -110400070 + L2 LINE L2 1720 2568 -746 484 295 21 155 chr5 89230193 89230403 -110399747 + L2 LINE L2 2817 3053 -260 2132 97 3 21 chr5 89230403 89230691 -110399459 - AluSq SINE Alu -30 283 1 484 295 21 155 chr5 89230691 89231042 -110399108 + L2 LINE L2 3053 3303 -10 1038 278 56 30 chr5 89231068 89231406 -110398744 + MLT1I LTR MaLR 57 403 -6 1129 229 41 18 chr5 89231954 89232308 -110397842 + MSTD LTR MaLR 3 396 0 2146 161 6 11 chr5 89233776 89234129 -110396021 + MLT1A1 LTR MaLR 3 353 -12 1144 215 151 0 chr5 89234388 89234686 -110395464 - MER2 DNA MER2_type -1 343 1 1338 207 32 43 chr5 89236558 89236906 -110393244 - MER2 DNA MER2_type 0 344 1 324 120 0 0 chr5 89236928 89236978 -110393172 + (TG)n Simple_repeat Simple_repeat 2 51 0 278 313 71 40 chr5 89237006 89237156 -110392994 + MIR SINE MIR 32 183 -76 24 0 0 0 chr5 89237211 89237235 -110392915 + AT_rich Low_complexity Low_complexity 1 24 0 285 29 0 0 chr5 89237625 89237659 -110392491 + (TC)n Simple_repeat Simple_repeat 1 34 0 553 327 143 32 chr5 89237697 89238159 -110391991 + L2 LINE L2 2455 2967 -347 344 329 19 26 chr5 89238388 89238543 -110391607 + L2 LINE L2 2952 3105 -208 949 326 206 21 chr5 89239869 89241162 -110388988 + L2 LINE L2 1163 2695 -619 1424 165 8 8 chr5 89241894 89242154 -110387996 + AluSq SINE Alu 54 313 0 21 57 0 0 chr5 89243289 89243324 -110386826 + AT_rich Low_complexity Low_complexity 1 35 0 934 173 0 0 chr5 89243986 89244136 -110386014 + AluSq/x SINE Alu 1 150 -162 223 266 128 11 chr5 89244138 89244232 -110385918 + MIR SINE MIR 49 153 -109 933 316 47 39 chr5 89244475 89244960 -110385190 + MLT1J LTR MaLR 2 490 -21 180 343 79 7 chr5 89245028 89245168 -110384982 - L2 LINE L2 -575 2739 2590 1576 266 31 22 chr5 89245586 89246044 -110384106 - LTR40b LTR ERVL 0 462 1 206 325 95 56 chr5 89246200 89246326 -110383824 - L2 LINE L2 -8 3264 3134 361 336 92 59 chr5 89246791 89247213 -110382937 + MLT1K LTR MaLR 147 582 -6 294 345 0 0 chr5 89247261 89247348 -110382802 + L3 LINE CR1 1483 1569 -8 707 319 55 8 chr5 89249099 89249337 -110380813 - MIR SINE MIR 0 262 14 312 341 6 37 chr5 89250051 89250215 -110379935 + MIR3 SINE MIR 47 205 -3 400 241 46 0 chr5 89250316 89250424 -110379726 - MER94 DNA DNA -21 113 1 2743 166 20 20 chr5 89250473 89251016 -110379134 + L1MC1 LINE L1 5662 6204 -129 714 219 7 0 chr5 89251490 89251636 -110378514 + MER46B DNA MER2_type 1 22 -214 2392 95 0 0 chr5 89251653 89251957 -110378193 + AluSc SINE Alu 1 304 -5 6078 111 10 13 chr5 89251957 89252895 -110377255 + L1MA3 LINE L1 5369 6303 -2 41 48 0 0 chr5 89252901 89252963 -110377187 + AT_rich Low_complexity Low_complexity 1 62 0 184 271 68 0 chr5 89253834 89253893 -110376257 + MIR SINE MIR 125 187 -75 24 32 0 0 chr5 89253929 89253960 -110376190 + AT_rich Low_complexity Low_complexity 1 31 0 764 294 79 44 chr5 89254103 89254508 -110375642 + MLT1K LTR MaLR 123 541 -47 910 205 6 0 chr5 89255611 89255782 -110374368 - AluJb SINE Alu -7 305 134 450 314 59 43 chr5 89255807 89256052 -110374098 + L1MC4a LINE L1 5654 5896 -245 268 105 32 57 chr5 89256839 89256963 -110373187 + (TA)n Simple_repeat Simple_repeat 2 122 0 527 101 16 58 chr5 89256976 89257164 -110372986 + (TA)n Simple_repeat Simple_repeat 1 180 0 39 0 0 0 chr5 89257164 89257203 -110372947 + AT_rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr5 89257372 89257401 -110372749 + AT_rich Low_complexity Low_complexity 1 29 0 339 266 46 9 chr5 89257570 89257679 -110372471 - L2 LINE L2 -1 3312 3200 2552 30 17 3 chr5 89258469 89258771 -110371379 - AluY SINE Alu -5 306 1 223 336 62 7 chr5 89259504 89259650 -110370500 - L3b LINE CR1 -169 1414 1261 27 29 0 0 chr5 89259833 89259867 -110370283 + AT_rich Low_complexity Low_complexity 1 34 0 325 226 60 0 chr5 89260442 89260526 -110369624 + L1MC4 LINE L1 6615 6703 -1339 807 224 6 0 chr5 89260527 89260683 -110369467 - FRAM SINE Alu -17 159 3 467 266 20 106 chr5 89262092 89262381 -110367769 + MER113 DNA MER1_type? 199 454 -67 1664 161 3 33 chr5 89262381 89262680 -110367470 + AluJo SINE Alu 1 290 -22 467 266 20 106 chr5 89262680 89262740 -110367410 + MER113 DNA MER1_type? 454 518 -3 2863 94 8 8 chr5 89263484 89264203 -110365947 - L1P4 LINE L1 -526 5637 4918 560 291 20 0 chr5 89264205 89264353 -110365797 - L1PA15-16 LINE L1 -5376 1473 1323 2420 43 40 3 chr5 89264751 89265050 -110365100 + AluY SINE Alu 2 311 0 567 0 0 0 chr5 89265063 89265126 -110365024 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 285 341 6 55 chr5 89265137 89265301 -110364849 - L1PA15-16 LINE L1 -5996 854 699 3432 224 54 29 chr5 89265683 89266556 -110363594 - L1PA15-16 LINE L1 -5946 903 9 385 290 42 5 chr5 89266561 89266775 -110363375 - L1M4 LINE L1 -2852 3294 3073 1061 220 140 48 chr5 89266786 89267164 -110362986 - MLT1C LTR MaLR -50 576 6 3509 115 2 17 chr5 89267288 89267820 -110362330 - L1PB2 LINE L1 0 6151 5628 4238 148 20 7 chr5 89267822 89268518 -110361632 + MER50 LTR ERV1 7 711 -23 4158 163 28 32 chr5 89268520 89269752 -110360398 - L1PB2 LINE L1 -517 5634 4407 20545 149 59 61 chr5 89269763 89271050 -110359100 - L1PA10 LINE L1 -1 6482 5194 1741 179 11 0 chr5 89271050 89271335 -110358815 - AluSx SINE Alu -24 288 1 20545 149 59 61 chr5 89271335 89275590 -110354560 - L1PA10 LINE L1 -1289 5194 892 12715 132 27 28 chr5 89325593 89327264 -110302886 - Tigger1 DNA MER2_type -243 2175 503 1907 129 0 30 chr5 89327264 89327559 -110302591 + AluSx SINE Alu 1 286 -26 533 42 14 0 chr5 89327559 89327631 -110302519 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 12715 132 27 28 chr5 89327631 89328136 -110302014 - Tigger1 DNA MER2_type -1913 505 1 456 301 54 23 chr5 89328242 89328501 -110301649 + L1MC4a LINE L1 4733 4999 -1147 564 264 35 56 chr5 89328597 89329064 -110301086 - L1ME LINE L1 -660 5502 5036 22 35 0 0 chr5 89329102 89329131 -110301019 + AT_rich Low_complexity Low_complexity 1 29 0 1873 113 92 0 chr5 89329221 89329505 -110300645 - AluSq SINE Alu -3 310 1 959 302 101 7 chr5 89329643 89330070 -110300080 + L1MC4a LINE L1 5404 5870 -1938 914 134 109 40 chr5 89330101 89330303 -110299847 - L1MA9 LINE L1 -49 6263 6048 * 1874 172 118 3 chr5 89330282 89330655 -110299495 + L1MA9 LINE L1 5696 6111 -201 2402 84 0 0 chr5 89330911 89331207 -110298943 + AluY SINE Alu 1 296 -15 30 0 0 0 chr5 89331236 89331266 -110298884 + AT_rich Low_complexity Low_complexity 1 30 0 895 274 20 4 chr5 89332964 89333209 -110296941 - MIR SINE MIR 0 262 14 1851 155 13 10 chr5 89333620 89333929 -110296221 - AluJb SINE Alu 0 312 3 2134 99 13 16 chr5 89334626 89334930 -110295220 - AluSg1 SINE Alu -6 303 1 408 88 0 0 chr5 89335028 89335085 -110295065 + (CA)n Simple_repeat Simple_repeat 2 58 0 28 0 0 0 chr5 89335264 89335292 -110294858 + AT_rich Low_complexity Low_complexity 1 28 0 2430 88 0 0 chr5 89336022 89336329 -110293821 + AluY SINE Alu 1 307 -4 1700 162 3 28 chr5 89337077 89337361 -110292789 - AluJo SINE Alu -34 278 2 192 158 0 0 chr5 89338338 89338376 -110291774 + (TG)n Simple_repeat Simple_repeat 2 39 0 2109 153 26 123 chr5 89338377 89338879 -110291271 + Tigger3b DNA MER2_type 1 453 -778 2663 119 50 205 chr5 89338950 89339158 -110290992 + Tigger3b DNA MER2_type 435 674 -2354 2665 7 0 0 chr5 89339158 89339446 -110290704 + AluYa5 SINE Alu 22 309 -2 2663 119 50 205 chr5 89339446 89339662 -110290488 + Tigger3b DNA MER2_type 674 922 -2106 226 71 24 24 chr5 89339662 89339704 -110290446 + (CTCA)n Simple_repeat Simple_repeat 1 42 0 2663 119 50 205 chr5 89339704 89340220 -110289930 + Tigger3b DNA MER2_type 922 1230 -1 1900 156 41 38 chr5 89340331 89340601 -110289549 + MER47A DNA MER2_type 1 274 -2049 2214 102 3 0 chr5 89340601 89340886 -110289264 - AluSg SINE Alu -24 286 1 1900 156 41 38 chr5 89340886 89340980 -110289170 + MER47A DNA MER2_type 274 366 0 21 36 0 0 chr5 89341637 89341665 -110288485 + AT_rich Low_complexity Low_complexity 1 28 0 2080 125 0 3 chr5 89342479 89342767 -110287383 + AluSx SINE Alu 22 308 -4 541 307 78 0 chr5 89342990 89343182 -110286968 + MIR SINE MIR 41 247 -15 188 214 24 0 chr5 89343434 89343476 -110286674 - L2 LINE L2 -8 3264 3222 966 254 35 113 chr5 89346225 89346800 -110283350 + MLT1H LTR MaLR 20 549 0 41715 63 3 1 chr5 89346998 89353143 -110277007 + L1PA5 LINE L1 1 6154 0 6735 11 0 0 chr5 89353744 89354508 -110275642 - L1PA3 LINE L1 -123 6032 5269 987 26 0 0 chr5 89354509 89354626 -110275524 + L1PA2 LINE L1 6038 6154 -1 21 36 0 0 chr5 89354647 89354675 -110275475 + AT_rich Low_complexity Low_complexity 1 28 0 2223 111 0 13 chr5 89355180 89355495 -110274655 + AluSq SINE Alu 1 311 -2 216 0 0 0 chr5 89355550 89355574 -110274576 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr5 89358178 89358207 -110271943 + AT_rich Low_complexity Low_complexity 1 29 0 43 20 0 0 chr5 89358852 89358902 -110271248 + AT_rich Low_complexity Low_complexity 1 50 0 489 384 59 17 chr5 89359694 89360155 -110269995 + L2 LINE L2 1745 2224 -1090 367 282 137 0 chr5 89360176 89360293 -110269857 + L2 LINE L2 3180 3312 -1 198 400 11 0 chr5 89360294 89360384 -110269766 + L2 LINE L2 2229 2319 -995 393 259 90 30 chr5 89360891 89361057 -110269093 + L2 LINE L2 3124 3299 -14 2380 77 10 7 chr5 89361184 89361494 -110268656 + AluSq SINE Alu 3 313 0 396 0 0 0 chr5 89361494 89361538 -110268612 + (TA)n Simple_repeat Simple_repeat 2 45 0 300 287 115 16 chr5 89362239 89362361 -110267789 - L2 LINE L2 0 3272 3139 788 242 0 0 chr5 89362368 89362521 -110267629 + AluJb SINE Alu 137 289 -23 800 221 13 0 chr5 89363280 89363434 -110266716 - FRAM SINE Alu -20 156 1 265 311 29 19 chr5 89365336 89365439 -110264711 - 7SK RNA RNA -89 104 1 1861 142 18 0 chr5 89365657 89365939 -110264211 + AluSx SINE Alu 1 287 -25 401 291 100 28 chr5 89366479 89366730 -110263420 + L2 LINE L2 3006 3274 -39 425 320 31 8 chr5 89367645 89367773 -110262377 - L2 LINE L2 -4 3268 3138 535 269 71 38 chr5 89367930 89368142 -110262008 - LTR33A LTR ERVL -92 431 213 2872 62 8 3 chr5 89368360 89368734 -110261416 + L1PA5 LINE L1 5776 6151 -3 180 111 0 0 chr5 89368738 89368765 -110261385 + (A)n Simple_repeat Simple_repeat 1 27 0 233 213 85 0 chr5 89368893 89368940 -110261210 + L2 LINE L2 3262 3312 -1 2081 123 0 3 chr5 89369030 89369323 -110260827 + AluSp SINE Alu 3 294 -19 257 289 72 47 chr5 89370841 89370992 -110259158 + MIR SINE MIR 2 162 -46 332 106 0 0 chr5 89371313 89371360 -110258790 + FRAM/FAM SINE Alu 34 80 -95 688 150 23 23 chr5 89371360 89371493 -110258657 - AluJo SINE Alu -55 257 125 425 270 45 56 chr5 89371536 89371714 -110258436 + MER5A DNA MER1_type 4 179 -10 869 198 11 32 chr5 89372238 89372333 -110257817 + MER5A DNA MER1_type 1 92 -97 1648 151 86 38 chr5 89372333 89372705 -110257445 - MLT1B LTR MaLR 0 390 1 869 198 11 32 chr5 89372705 89372796 -110257354 + MER5A DNA MER1_type 92 183 -6 2317 104 0 3 chr5 89374008 89374315 -110255835 + AluSg SINE Alu 1 306 -4 238 265 122 31 chr5 89375441 89375539 -110254611 - L2 LINE L2 -15 3257 3151 3522 135 9 7 chr5 89376496 89377045 -110253105 + MER44D DNA MER2_type 1 605 0 1076 138 6 0 chr5 89378315 89378475 -110251675 - AluJb SINE Alu -16 296 136 21 36 0 0 chr5 89378829 89378857 -110251293 + AT_rich Low_complexity Low_complexity 1 28 0 1397 205 51 0 chr5 89380710 89380964 -110249186 + Tigger7 DNA MER2_type 1 267 -466 2202 91 0 4 chr5 89380971 89381246 -110248904 + AluSc SINE Alu 1 274 -35 243 0 0 0 chr5 89381255 89381282 -110248868 + (CAA)n Simple_repeat Simple_repeat 2 28 0 454 162 0 27 chr5 89381283 89381357 -110248793 + Tigger7 DNA MER2_type 2499 2570 -17 2060 72 0 0 chr5 89381401 89381664 -110248486 - AluY SINE Alu -1 310 48 1936 111 68 37 chr5 89382508 89382859 -110247291 + THE1B LTR MaLR 3 364 0 348 191 29 0 chr5 89382996 89383064 -110247086 + L2 LINE L2 3205 3274 -39 564 284 181 10 chr5 89383090 89383294 -110246856 - MIR SINE MIR -21 241 3 302 215 0 118 chr5 89384143 89384236 -110245914 + L2 LINE L2 3231 3312 -1 1492 307 111 23 chr5 89384360 89385279 -110244871 + L2 LINE L2 2307 3313 0 27 0 0 0 chr5 89386835 89386862 -110243288 + AT_rich Low_complexity Low_complexity 1 27 0 242 315 33 16 chr5 89386862 89387046 -110243104 + L1MC/D LINE L1 5621 5807 -2001 1858 150 21 0 chr5 89388895 89389175 -110240975 + AluJo SINE Alu 1 286 -26 856 289 65 18 chr5 89389600 89390012 -110240138 + LTR16C LTR ERVL 1 491 0 240 35 0 0 chr5 89392217 89392246 -110237904 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2121 71 0 32 chr5 89392249 89392530 -110237620 - AluSc SINE Alu -37 272 1 23 0 0 29 chr5 89392804 89392822 -110237328 + AT_rich Low_complexity Low_complexity 1 19 -14 4359 112 20 1 chr5 89392822 89393477 -110236673 + L1PA16 LINE L1 5491 6157 -9 23 0 0 29 chr5 89393477 89393492 -110236658 + AT_rich Low_complexity Low_complexity 19 33 0 343 303 91 15 chr5 89393696 89393970 -110236180 - L1ME LINE L1 -301 5820 5526 313 365 81 33 chr5 89394721 89395250 -110234900 - L2 LINE L2 -276 3037 2483 3659 116 36 22 chr5 89395401 89396004 -110234146 - Tigger3(Golem) DNA MER2_type -1 3028 2417 186 71 0 0 chr5 89396004 89396032 -110234118 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 689 167 0 0 chr5 89396032 89396140 -110234010 - FLAM_C SINE Alu -23 120 13 571 164 31 16 chr5 89396140 89396268 -110233882 - Tigger3(Golem) DNA MER2_type -623 2406 2277 501 169 79 0 chr5 89396259 89396348 -110233802 - Tigger3(Golem) DNA MER2_type -2921 108 13 * 5971 110 27 1 chr5 89396348 89397621 -110232529 + L1PA13 LINE L1 4862 6159 -4 2090 142 45 26 chr5 89397785 89398166 -110231984 - MLT1B LTR MaLR 0 390 3 1263 45 0 0 chr5 89398229 89398386 -110231764 + L1PA4 LINE L1 5993 6149 -6 1494 209 10 16 chr5 89398688 89398994 -110231156 + AluJo SINE Alu 1 304 -8 280 340 30 10 chr5 89399861 89399961 -110230189 - MIR SINE MIR -71 137 36 234 91 0 0 chr5 89399966 89399999 -110230151 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 21 0 0 0 chr5 89400284 89400305 -110229845 + AT_rich Low_complexity Low_complexity 1 21 0 208 315 70 28 chr5 89401624 89401767 -110228383 - L2 LINE L2 -2 3311 3163 716 211 5 72 chr5 89401865 89402059 -110228091 + MER58B DNA MER1_type 1 181 -160 951 205 38 14 chr5 89402074 89402284 -110227866 - AluJo SINE Alu -14 298 84 848 193 20 0 chr5 89402286 89402436 -110227714 + MER58B DNA MER1_type 174 326 -15 675 190 0 0 chr5 89403618 89403755 -110226395 + GA-rich Low_complexity Low_complexity 3 139 0 2640 51 0 0 chr5 89404664 89404975 -110225175 - AluY SINE Alu 0 311 1 276 30 0 0 chr5 89405639 89405672 -110224478 + (TC)n Simple_repeat Simple_repeat 1 33 0 2374 93 0 19 chr5 89405917 89406229 -110223921 + AluSx SINE Alu 1 306 -6 13945 135 17 15 chr5 89406433 89407590 -110222560 - L1PA11 LINE L1 0 6489 5336 2216 85 27 3 chr5 89407590 89407885 -110222265 - AluY SINE Alu -9 302 1 13945 135 17 15 chr5 89407885 89409924 -110220226 - L1PA11 LINE L1 -1153 5336 3278 990 191 12 32 chr5 89409926 89410172 -110219978 + L1P LINE L1 1978 2218 -3928 4569 243 24 59 chr5 89410177 89410634 -110219516 - L1PA11 LINE L1 -4128 2333 1861 183 42 0 0 chr5 89410634 89410658 -110219492 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1842 130 26 4 chr5 89410662 89410931 -110219219 - AluSx SINE Alu -37 275 1 4569 243 24 59 chr5 89410931 89412463 -110217687 - L1PA11 LINE L1 -4603 1858 446 2055 93 10 35 chr5 89412463 89412759 -110217391 + AluSc SINE Alu 1 290 -19 983 117 6 17 chr5 89412759 89412938 -110217212 + (TA)n Simple_repeat Simple_repeat 1 177 0 2055 93 10 35 chr5 89412938 89412952 -110217198 + AluSc SINE Alu 290 303 -6 4569 243 24 59 chr5 89412952 89413375 -110216775 - L1PA11 LINE L1 -6015 446 10 1843 163 14 0 chr5 89413491 89413786 -110216364 + AluJb SINE Alu 10 308 -4 24 0 0 0 chr5 89415016 89415040 -110215110 + AT_rich Low_complexity Low_complexity 1 24 0 561 307 53 18 chr5 89415370 89415595 -110214555 + MIR SINE MIR 29 261 -1 283 322 34 25 chr5 89416089 89416207 -110213943 + L2 LINE L2 3194 3312 -1 2003 141 3 0 chr5 89416346 89416637 -110213513 - AluSx SINE Alu -20 292 1 1324 152 101 51 chr5 89419359 89419635 -110210515 + AluSx SINE Alu 1 290 -22 2552 51 3 6 chr5 89420058 89420369 -110209781 - AluY SINE Alu -1 310 1 29 28 0 0 chr5 89420782 89420818 -110209332 + AT_rich Low_complexity Low_complexity 1 36 0 2367 97 7 0 chr5 89420906 89421214 -110208936 - AluSg SINE Alu 0 310 1 21 0 0 0 chr5 89422460 89422481 -110207669 + AT_rich Low_complexity Low_complexity 1 21 0 2010 131 13 13 chr5 89422609 89422921 -110207229 - AluJb SINE Alu 0 312 1 24 0 0 0 chr5 89423070 89423094 -110207056 + AT_rich Low_complexity Low_complexity 1 24 0 538 325 15 10 chr5 89423424 89423621 -110206529 - LTR33 LTR ERVL -321 200 3 356 342 40 33 chr5 89423766 89423918 -110206232 - L2 LINE L2 -8 3264 3112 369 276 89 24 chr5 89423927 89424050 -110206100 + L2 LINE L2 3181 3311 -2 21 57 0 0 chr5 89424369 89424404 -110205746 + AT_rich Low_complexity Low_complexity 1 35 0 2372 80 7 0 chr5 89424548 89424850 -110205300 - AluY SINE Alu -7 304 1 330 234 131 0 chr5 89425231 89425338 -110204812 + L1M LINE L1 5269 5389 -781 639 209 72 32 chr5 89425540 89425818 -110204332 + L1MC5 LINE L1 7619 7907 -54 379 274 154 39 chr5 89426742 89426978 -110203172 - MIR SINE MIR 0 262 4 257 286 33 44 chr5 89427216 89427307 -110202843 - MIR3 SINE MIR 0 208 119 2159 84 0 40 chr5 89428048 89428347 -110201803 + AluSc SINE Alu 7 293 -16 2334 91 0 0 chr5 89428530 89428826 -110201324 - AluSg1 SINE Alu -13 296 1 33 94 0 0 chr5 89430118 89430214 -110199936 + AT_rich Low_complexity Low_complexity 1 96 0 33 20 0 20 chr5 89430905 89430927 -110199223 + AT_rich Low_complexity Low_complexity 1 22 -28 2112 99 21 0 chr5 89430927 89431209 -110198941 + AluSx SINE Alu 1 288 -24 33 20 0 20 chr5 89431209 89431237 -110198913 + AT_rich Low_complexity Low_complexity 22 50 0 1791 117 3 91 chr5 89432606 89432934 -110197216 - AluSx SINE Alu 0 301 1 21 36 0 0 chr5 89433209 89433237 -110196913 + AT_rich Low_complexity Low_complexity 1 28 0 1060 294 42 28 chr5 89434186 89434613 -110195537 + L2 LINE L2 2783 3218 -95 701 229 110 78 chr5 89434674 89435254 -110194896 - L1MC5 LINE L1 -71 7890 7292 346 233 113 31 chr5 89435221 89435380 -110194770 - L1MC4 LINE L1 -547 7495 7324 * 2027 139 0 10 chr5 89435744 89436039 -110194111 - AluSx SINE Alu -20 292 1 1727 275 125 47 chr5 89436046 89437027 -110193123 - L1MC4a LINE L1 -884 6924 5824 2124 114 3 23 chr5 89437027 89437335 -110192815 + AluY SINE Alu 1 302 -9 1727 275 125 47 chr5 89437335 89437598 -110192552 - L1MC4a LINE L1 -1984 5824 5583 3239 169 52 19 chr5 89438451 89439125 -110191025 + LTR28 LTR ERV1 1 636 0 669 261 79 56 chr5 89439360 89439575 -110190575 + MLT1F LTR MaLR 3 222 -320 1947 146 0 0 chr5 89439890 89440196 -110189954 - AluSg SINE Alu 0 306 1 278 298 92 0 chr5 89440262 89440403 -110189747 + L1ME4a LINE L1 3808 3961 -2185 473 229 6 0 chr5 89440460 89440617 -110189533 + (TA)n Simple_repeat Simple_repeat 2 159 0 319 353 0 0 chr5 89440630 89440763 -110189387 + L1ME4a LINE L1 4029 4161 -1985 659 292 70 59 chr5 89440836 89441579 -110188571 + L1ME4a LINE L1 4185 4935 -1211 1449 189 34 4 chr5 89441667 89441931 -110188219 + AluJo SINE Alu 3 274 -38 315 191 0 0 chr5 89441932 89441995 -110188155 + GA-rich Low_complexity Low_complexity 3 65 0 1680 132 37 112 chr5 89442162 89442477 -110187673 + THE1C LTR MaLR 1 281 -94 800 169 0 22 chr5 89442477 89442613 -110187537 + FLAM_C SINE Alu 1 133 0 1680 132 37 112 chr5 89442613 89442700 -110187450 + THE1C LTR MaLR 281 373 -2 246 293 111 11 chr5 89442799 89442980 -110187170 + L1ME4a LINE L1 5280 5478 -684 2023 91 0 4 chr5 89443006 89443270 -110186880 + AluSg SINE Alu 1 263 -47 309 317 21 48 chr5 89443296 89443441 -110186709 + L1ME3A LINE L1 5727 5867 -303 452 305 48 29 chr5 89443685 89443856 -110186294 + MIR SINE MIR 6 180 -82 2302 90 0 0 chr5 89443856 89444144 -110186006 - AluSx SINE Alu -24 288 1 452 305 48 29 chr5 89444144 89444203 -110185947 + MIR SINE MIR 180 236 -26 519 71 35 0 chr5 89444299 89444384 -110185766 + (TG)n Simple_repeat Simple_repeat 1 88 0 207 0 0 0 chr5 89445038 89445061 -110185089 + (CA)n Simple_repeat Simple_repeat 2 24 0 216 200 22 0 chr5 89445190 89445235 -110184915 + MIR SINE MIR 108 153 -109 801 256 45 138 chr5 89445505 89446040 -110184110 - L2 LINE L2 0 3313 2829 200 269 19 0 chr5 89446525 89446577 -110183573 - MIR3 SINE MIR -48 160 108 731 237 30 50 chr5 89447878 89448178 -110181972 + L1ME4a LINE L1 5507 5800 -321 367 232 0 30 chr5 89448273 89448372 -110181778 + L1ME4a LINE L1 5969 6064 -57 490 278 174 9 chr5 89448670 89448900 -110181250 + LTR16A1 LTR ERVL 190 457 0 1011 355 64 40 chr5 89449205 89450253 -110179897 + L2 LINE L2 2013 3082 -190 255 336 95 22 chr5 89450384 89450521 -110179629 + L2 LINE L2 3125 3271 -1 275 232 207 12 chr5 89452596 89452678 -110177472 - L2 LINE L2 -1 3271 3174 667 290 126 4 chr5 89453192 89453423 -110176727 - MIR SINE MIR -3 259 1 903 224 29 136 chr5 89453723 89454142 -110176008 - MLT1A2 LTR MaLR 0 374 1 358 283 28 0 chr5 89454866 89454972 -110175178 + MER81 DNA DNA 1 109 -5 583 189 25 8 chr5 89455202 89455324 -110174826 + MER96B DNA MER1_type? 285 408 -9 465 287 134 30 chr5 89455631 89455833 -110174317 + MIR SINE MIR 6 228 -34 2169 94 37 0 chr5 89456111 89456410 -110173740 - AluSg SINE Alu 0 310 1 381 291 113 7 chr5 89457319 89457460 -110172690 - MIR3 SINE MIR -20 188 33 285 319 28 50 chr5 89458034 89458175 -110171975 + L2 LINE L2 2923 3060 -212 756 296 45 29 chr5 89458476 89458790 -110171360 - LTR16C LTR ERVL -93 398 80 249 57 0 0 chr5 89459050 89459085 -110171065 + (TC)n Simple_repeat Simple_repeat 1 35 0 224 30 30 0 chr5 89459085 89459118 -110171032 + (TA)n Simple_repeat Simple_repeat 1 34 0 279 0 0 0 chr5 89459122 89459153 -110170997 + (CA)n Simple_repeat Simple_repeat 2 32 0 1994 133 0 0 chr5 89459333 89459611 -110170539 - AluSx SINE Alu -34 278 1 1862 164 24 3 chr5 89459795 89460093 -110170057 + AluJo SINE Alu 1 304 -8 234 299 69 7 chr5 89460280 89460424 -110169726 - L1M4 LINE L1 -3292 2854 2702 2134 114 0 13 chr5 89460964 89461272 -110168878 + AluSx SINE Alu 1 304 -8 453 195 12 0 chr5 89461421 89461503 -110168647 - AluJ/FLAM SINE Alu -229 83 1 29300 97 4 16 chr5 89461715 89466852 -110163298 - L1PA6 LINE L1 -2 6467 1396 712 96 0 0 chr5 89466833 89466927 -110163223 - L1PA6 LINE L1 -6364 97 4 * 2381 91 0 0 chr5 89467128 89467425 -110162725 - AluSc SINE Alu -12 297 1 1878 147 17 0 chr5 89467973 89468266 -110161884 - AluSx SINE Alu -14 298 1 250 47 31 47 chr5 89468733 89468797 -110161353 + (TAAAAA)n Simple_repeat Simple_repeat 3 65 0 256 240 0 0 chr5 89469146 89469196 -110160954 - L2 LINE L2 0 3313 3264 213 168 56 19 chr5 89469313 89469420 -110160730 + (CATATA)n Simple_repeat Simple_repeat 4 114 0 21 82 0 0 chr5 89469439 89469488 -110160662 + AT_rich Low_complexity Low_complexity 1 49 0 276 65 22 0 chr5 89469601 89469647 -110160503 - L1PB2 LINE L1 -2 6149 6103 262 200 0 0 chr5 89469647 89469692 -110160458 - U2 snRNA snRNA -143 45 1 5746 148 16 6 chr5 89469694 89471529 -110158621 - L1PB2 LINE L1 -47 6104 4254 22 0 0 0 chr5 89471621 89471643 -110158507 + AT_rich Low_complexity Low_complexity 1 22 0 537 246 25 0 chr5 89471674 89471792 -110158358 - L2 LINE L2 -2 3311 3191 485 253 93 31 chr5 89472369 89472531 -110157619 - MIR SINE MIR -1 261 90 26 30 0 0 chr5 89472952 89472985 -110157165 + AT_rich Low_complexity Low_complexity 1 33 0 309 360 9 0 chr5 89474377 89474488 -110155662 - MIR3 SINE MIR -27 181 70 250 233 121 0 chr5 89474535 89474651 -110155499 + MER113 DNA MER1_type? 1 130 -391 11848 113 14 61 chr5 89474669 89480902 -110149248 - L1PA7 LINE L1 -11 6143 13 918 208 87 82 chr5 89480919 89481298 -110148852 + MER113 DNA MER1_type? 141 521 0 21 40 0 40 chr5 89481352 89481383 -110148767 + AT_rich Low_complexity Low_complexity 1 31 -17 2249 74 3 20 chr5 89481383 89481679 -110148471 + AluY SINE Alu 1 291 -20 21 40 0 40 chr5 89481679 89481697 -110148453 + AT_rich Low_complexity Low_complexity 31 48 0 846 228 147 54 chr5 89482207 89482541 -110147609 + MLT1A1 LTR MaLR 1 365 0 21 0 0 0 chr5 89482719 89482740 -110147410 + AT_rich Low_complexity Low_complexity 1 21 0 347 318 75 40 chr5 89482780 89482953 -110147197 + MIR SINE MIR 20 198 -64 2329 81 0 53 chr5 89483187 89483373 -110146777 - AluSx SINE Alu -6 306 143 2159 110 3 0 chr5 89483373 89483672 -110146478 - AluSg SINE Alu -10 300 1 2329 81 0 53 chr5 89483672 89483806 -110146344 - AluSx SINE Alu -169 143 3 2295 90 6 13 chr5 89484080 89484392 -110145758 + AluSg SINE Alu 1 310 0 219 36 0 0 chr5 89484440 89484468 -110145682 + (TG)n Simple_repeat Simple_repeat 2 29 0 244 293 10 50 chr5 89484801 89484900 -110145250 + MER5A DNA MER1_type 2 96 -93 410 218 14 92 chr5 89484900 89485042 -110145108 + MLT1D LTR MaLR 1 131 -495 751 145 24 0 chr5 89485043 89485167 -110144983 + AluJb SINE Alu 1 127 -185 1578 185 51 24 chr5 89485173 89485547 -110144603 + MLT1D LTR MaLR 116 501 -4 228 341 11 11 chr5 89485559 89485650 -110144500 + MER5A DNA MER1_type 99 189 0 2117 113 3 3 chr5 89486418 89486711 -110143439 - AluSx SINE Alu -15 297 5 1169 190 54 16 chr5 89486743 89487001 -110143149 + L1MC3 LINE L1 6530 6797 -988 1337 249 69 48 chr5 89487002 89487120 -110143030 + MLT1D LTR MaLR 1 115 -390 693 221 0 0 chr5 89487120 89487247 -110142903 - FLAM_C SINE Alu -5 128 2 1337 249 69 48 chr5 89487247 89487452 -110142698 + MLT1D LTR MaLR 115 232 -273 1605 144 40 25 chr5 89487452 89487729 -110142421 + AluJb SINE Alu 11 291 -21 1337 249 69 48 chr5 89487729 89488009 -110142141 + MLT1D LTR MaLR 232 505 0 3346 162 128 94 chr5 89488009 89488295 -110141855 + L1MC3 LINE L1 6794 7069 -716 302 287 11 0 chr5 89488295 89488382 -110141768 + MLT1F1 LTR MaLR 35 122 -445 3346 162 128 94 chr5 89488382 89488967 -110141183 + L1MC3 LINE L1 7069 7784 -1 1347 205 16 69 chr5 89489506 89489882 -110140268 + MLT1A2 LTR MaLR 19 374 0 2062 320 202 38 chr5 89489958 89491696 -110138454 - L2 LINE L2 -1 3312 1075 1755 167 3 58 chr5 89491696 89492025 -110138125 - AluJo SINE Alu 0 312 2 2062 320 202 38 chr5 89492025 89492638 -110137512 - L2 LINE L2 -2238 1075 564 438 107 33 16 chr5 89492721 89492842 -110137308 + (TA)n Simple_repeat Simple_repeat 2 124 0 1463 270 79 7 chr5 89493073 89493643 -110136507 - Charlie7 DNA MER1_type -278 2334 1724 528 204 0 28 chr5 89493651 89493759 -110136391 - AluJb SINE Alu -18 294 190 274 178 0 0 chr5 89493759 89493804 -110136346 - AluJb SINE Alu -68 234 190 1431 197 0 0 chr5 89493804 89494038 -110136112 - AluJb SINE Alu -78 234 1 2093 192 69 69 chr5 89494397 89494432 -110135718 - MLT2B1 LTR ERVL 0 520 486 606 51 13 0 chr5 89494432 89494510 -110135640 + MADE1 DNA Mariner 1 79 -1 2093 192 69 69 chr5 89494510 89494645 -110135505 - MLT2B1 LTR ERVL -34 486 352 4349 207 26 7 chr5 89494645 89495491 -110134659 + MER21B LTR ERV1 1 862 -1 2093 192 69 69 chr5 89495491 89495839 -110134311 - MLT2B1 LTR ERVL -167 353 1 234 298 12 0 chr5 89496133 89496217 -110133933 - Charlie7 DNA MER1_type -1030 1582 1498 3424 145 39 7 chr5 89496238 89496823 -110133327 + MER6A DNA MER2_type 1 604 -1 430 301 72 34 chr5 89496834 89497043 -110133107 - Charlie7 DNA MER1_type -2274 338 122 1532 56 31 0 chr5 89497525 89497721 -110132429 + L1PB1 LINE L1 5947 6148 -3 22 35 0 0 chr5 89497849 89497878 -110132272 + AT_rich Low_complexity Low_complexity 1 29 0 645 172 30 0 chr5 89498149 89498283 -110131867 + L1 LINE L1 3667 3804 -2342 397 197 22 78 chr5 89498283 89498458 -110131692 - FLAM SINE Alu -24 109 47 3007 191 53 6 chr5 89498465 89499433 -110130717 + L1 LINE L1 3795 4844 -1302 649 266 100 26 chr5 89499629 89499831 -110130319 - L1P5 LINE L1 -720 5434 5248 1517 161 93 62 chr5 89499831 89500185 -110129965 + MLT1A1 LTR MaLR 1 365 0 649 266 100 26 chr5 89500185 89500581 -110129569 - L1P5 LINE L1 -906 5248 4789 255 276 123 12 chr5 89500803 89500966 -110129184 - L1M4 LINE L1 -1905 4241 4061 291 329 91 31 chr5 89500986 89501372 -110128778 - L1M4 LINE L1 -2328 3818 3410 21 57 0 0 chr5 89501570 89501605 -110128545 + AT_rich Low_complexity Low_complexity 1 35 0 538 151 0 0 chr5 89501824 89501910 -110128240 - AluJ/FLAM SINE Alu -226 86 1 22 0 0 0 chr5 89501910 89501932 -110128218 + AT_rich Low_complexity Low_complexity 1 22 0 34 55 0 0 chr5 89502028 89502083 -110128067 + AT_rich Low_complexity Low_complexity 1 55 0 469 278 52 29 chr5 89502598 89502771 -110127379 - MLT1J2 LTR MaLR -271 179 3 4657 185 18 1 chr5 89502916 89503736 -110126414 - MER6 DNA MER2_type 0 865 32 1739 184 3 0 chr5 89503783 89504065 -110126085 - AluSx SINE Alu -29 283 1 252 229 28 37 chr5 89504076 89504185 -110125965 - L1M4 LINE L1 -3891 2255 2148 320 149 0 0 chr5 89504678 89504725 -110125425 + AluS SINE Alu 14 60 -243 599 268 19 57 chr5 89504730 89504939 -110125211 - MLT1J1 LTR MaLR -42 404 204 351 155 0 17 chr5 89504950 89505008 -110125142 - L1MC4a LINE L1 -440 7368 7312 * 1367 191 90 116 chr5 89505005 89505538 -110124612 + L1MC4a LINE L1 7290 7808 0 638 270 84 72 chr5 89506357 89506716 -110123434 - MLT1J1 LTR MaLR -3 443 81 241 274 155 0 chr5 89506760 89506844 -110123306 - MLT1J1 LTR MaLR -347 99 3 183 100 0 0 chr5 89507309 89507339 -110122811 + (TG)n Simple_repeat Simple_repeat 1 30 0 2012 145 10 7 chr5 89507353 89507663 -110122487 - AluSx SINE Alu -1 311 1 345 314 75 13 chr5 89507955 89508114 -110122036 + MIR SINE MIR 24 192 -70 185 195 0 49 chr5 89509027 89509068 -110121082 + L3b LINE CR1 1538 1576 -7 235 241 157 24 chr5 89509313 89509396 -110120754 + L2 LINE L2 3186 3279 -34 2726 176 65 32 chr5 89509415 89510010 -110120140 + MLT1E3 LTR MaLR 8 622 -2 2282 113 0 0 chr5 89510016 89510325 -110119825 + AluSg SINE Alu 2 310 0 182 206 0 0 chr5 89510333 89510367 -110119783 + L2 LINE L2 3267 3300 -13 210 37 0 0 chr5 89510368 89510395 -110119755 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr5 89510547 89510575 -110119575 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr5 89511375 89511395 -110118755 + (A)n Simple_repeat Simple_repeat 1 20 0 509 113 0 0 chr5 89511395 89511466 -110118684 + FLAM SINE Alu 57 127 -16 2055 240 60 45 chr5 89511485 89511641 -110118509 + L1ME3A LINE L1 5485 5637 -533 1624 176 10 41 chr5 89511641 89511936 -110118214 - AluJb SINE Alu -24 288 3 2055 240 60 45 chr5 89511936 89512429 -110117721 + L1ME3A LINE L1 5637 6144 -26 384 88 0 0 chr5 89512650 89512707 -110117443 + (CA)n Simple_repeat Simple_repeat 1 57 0 342 98 0 0 chr5 89512859 89512910 -110117240 + (CA)n Simple_repeat Simple_repeat 1 51 0 229 217 0 0 chr5 89513286 89513332 -110116818 - MLT1E3 LTR MaLR 0 624 579 26 50 0 0 chr5 89513414 89513454 -110116696 + AT_rich Low_complexity Low_complexity 1 40 0 1115 114 9 91 chr5 89513454 89513674 -110116476 - L1PA10 LINE L1 -4 6164 5963 2824 171 288 11 chr5 89513699 89513938 -110116212 - MER52A LTR ERV1 0 1278 1106 1722 74 4 29 chr5 89513938 89514181 -110115969 - AluSg/x SINE Alu -6 306 70 2824 171 288 11 chr5 89514181 89514942 -110115208 - MER52A LTR ERV1 -172 1106 44 2026 113 0 23 chr5 89515228 89515529 -110114621 - AluY SINE Alu -17 294 1 2290 74 20 7 chr5 89515531 89515827 -110114323 - AluSg SINE Alu -10 300 1 21 0 0 0 chr5 89515999 89516020 -110114130 + AT_rich Low_complexity Low_complexity 1 21 0 190 321 49 0 chr5 89516484 89516565 -110113585 - MIR SINE MIR -1 261 177 1011 274 125 20 chr5 89516613 89517116 -110113034 + L1MEd LINE L1 1 556 -5563 435 265 139 5 chr5 89517239 89517454 -110112696 - L1MEc LINE L1 -3746 2469 2226 * 811 292 80 30 chr5 89517447 89517810 -110112340 - L1MEc LINE L1 -5979 417 37 716 238 72 50 chr5 89517819 89518138 -110112012 + L1MEd LINE L1 622 947 -5172 2155 117 7 0 chr5 89519916 89520207 -110109943 + AluSx SINE Alu 5 297 -15 647 71 27 49 chr5 89520207 89520391 -110109759 + (TA)n Simple_repeat Simple_repeat 1 180 0 482 135 34 28 chr5 89520421 89520599 -110109551 + (TA)n Simple_repeat Simple_repeat 2 180 0 714 65 76 12 chr5 89520620 89521089 -110109061 + (TA)n Simple_repeat Simple_repeat 1 498 0 1147 99 0 0 chr5 89521849 89522000 -110108150 - AluSc SINE Alu -1 308 158 23 0 0 0 chr5 89522084 89522107 -110108043 + AT_rich Low_complexity Low_complexity 1 23 0 42 36 0 0 chr5 89522221 89522277 -110107873 + AT_rich Low_complexity Low_complexity 1 56 0 2360 97 3 0 chr5 89522424 89522734 -110107416 + AluSp SINE Alu 1 311 -2 390 229 56 69 chr5 89523192 89523336 -110106814 - MIR SINE MIR -120 142 1 281 261 0 81 chr5 89523460 89523571 -110106579 + L2 LINE L2 3156 3257 -56 191 269 128 26 chr5 89524002 89524080 -110106070 + MIR SINE MIR 131 216 -46 1592 155 0 76 chr5 89524298 89524485 -110105665 - AluJo SINE Alu -15 297 142 2040 123 7 0 chr5 89524485 89524770 -110105380 + AluSx SINE Alu 1 287 -25 1592 155 0 76 chr5 89524770 89524899 -110105251 - AluJo SINE Alu -170 142 5 408 203 0 13 chr5 89525010 89525088 -110105062 + Tigger5 DNA MER2_type 2 78 -2245 230 211 18 35 chr5 89525088 89525145 -110105005 - Tigger5 DNA MER2_type -3 2320 2265 * 321 130 19 37 chr5 89525098 89525152 -110104998 + Tigger5 DNA MER2_type 2271 2323 0 1252 306 63 15 chr5 89525210 89525668 -110104482 + LTR16C LTR ERVL 12 491 0 1796 163 7 3 chr5 89525687 89526013 -110104137 - AluJb SINE Alu 0 312 1 34 24 0 0 chr5 89527126 89527167 -110102983 + AT_rich Low_complexity Low_complexity 1 41 0 383 75 0 0 chr5 89527808 89527861 -110102289 - Alu SINE Alu 0 301 249 819 61 0 0 chr5 89527861 89527959 -110102191 - AluY SINE Alu -213 98 1 222 370 34 0 chr5 89529014 89529133 -110101017 + L3 LINE CR1 1444 1566 -11 505 157 307 0 chr5 89529357 89529497 -110100653 - MER5A DNA MER1_type -1 188 6 24 0 0 0 chr5 89530733 89530757 -110099393 + GC_rich Low_complexity Low_complexity 1 24 0 265 254 14 14 chr5 89530784 89530855 -110099295 + CT-rich Low_complexity Low_complexity 3 73 0 306 294 104 60 chr5 89531166 89531435 -110098715 - L1M2 LINE L1 -5715 1134 854 2494 73 0 0 chr5 89582625 89582926 -110047224 + AluSx SINE Alu 1 301 -11 2130 107 3 39 chr5 89583002 89583312 -110046838 - AluSx SINE Alu -13 299 1 333 0 0 0 chr5 89583312 89583349 -110046801 + (T)n Simple_repeat Simple_repeat 1 37 0 2171 82 3 0 chr5 89583623 89583931 -110046219 + AluSp SINE Alu 2 310 0 2073 84 25 50 chr5 89584120 89584441 -110045709 - AluSq SINE Alu 0 313 1 394 130 29 0 chr5 89584442 89584511 -110045639 - L1MC1 LINE L1 -6 6327 6257 1977 114 21 0 chr5 89584537 89584827 -110045323 + AluSq SINE Alu 1 296 -17 787 237 112 43 chr5 89585050 89585282 -110044868 + MIR SINE MIR 2 249 -13 22 56 0 0 chr5 89585416 89585452 -110044698 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 89585978 89586002 -110044148 + AT_rich Low_complexity Low_complexity 1 24 0 504 280 37 78 chr5 89586267 89586351 -110043799 + MER102b DNA MER1_type 33 119 -1309 2296 103 7 0 chr5 89586351 89586661 -110043489 - AluSx SINE Alu 0 312 1 504 280 37 78 chr5 89586661 89586872 -110043278 + MER102b DNA MER1_type 119 316 -25 371 243 75 0 chr5 89587975 89588082 -110042068 - MLT1G1 LTR MaLR 0 595 481 2062 119 24 0 chr5 89588239 89588533 -110041617 - AluSg SINE Alu -9 301 1 237 237 0 17 chr5 89588659 89588718 -110041432 - MLT1F LTR MaLR -437 105 48 253 255 20 0 chr5 89589575 89589626 -110040524 - MIR SINE MIR -113 95 44 26 30 0 0 chr5 89589655 89589688 -110040462 + AT_rich Low_complexity Low_complexity 1 33 0 288 298 190 8 chr5 89589710 89589831 -110040319 - MIR SINE MIR -9 253 111 1347 213 47 14 chr5 89589978 89590339 -110039811 + MLT1B LTR MaLR 18 390 0 3987 176 49 66 chr5 89590864 89590930 -110039220 - L1MD2 LINE L1 -2 6357 6291 2322 60 30 30 chr5 89590930 89591231 -110038919 + AluY SINE Alu 1 301 -10 3987 176 49 66 chr5 89591231 89591628 -110038522 - L1MD2 LINE L1 -68 6291 5889 1890 161 3 0 chr5 89591628 89591913 -110038237 + AluJo SINE Alu 1 286 -26 3987 176 49 66 chr5 89591913 89592415 -110037735 - L1MD2 LINE L1 -470 5889 5380 1950 196 83 57 chr5 89592415 89592955 -110037195 - MLT2B3 LTR ERVL 0 554 1 3987 176 49 66 chr5 89592955 89592974 -110037176 - L1MD2 LINE L1 -979 5380 5362 2184 134 7 0 chr5 89592974 89593279 -110036871 - AluSx SINE Alu -5 307 1 3987 176 49 66 chr5 89593279 89593389 -110036761 - L1MD2 LINE L1 -997 5362 5278 1194 130 5 0 chr5 89593419 89593603 -110036547 - AluY SINE Alu -8 303 119 1637 163 46 0 chr5 89593603 89593910 -110036240 - L1M3 LINE L1 -367 5816 5496 811 62 0 200 chr5 89593910 89594070 -110036080 - AluSp/q SINE Alu -14 299 172 1002 159 81 37 chr5 89594070 89594240 -110035910 - L1M3 LINE L1 -677 5503 5342 2308 111 0 0 chr5 89594240 89594547 -110035603 - AluSx SINE Alu -5 307 1 1002 159 81 37 chr5 89594547 89594766 -110035384 - L1M3 LINE L1 -838 5342 5099 * 2293 201 98 24 chr5 89594750 89595498 -110034652 - L1MDa LINE L1 -4378 2028 1226 1228 130 89 33 chr5 89595514 89595784 -110034366 - L1MA8 LINE L1 -4 6287 6003 189 94 0 0 chr5 89595797 89595829 -110034321 + (T)n Simple_repeat Simple_repeat 1 32 0 930 175 67 26 chr5 89595832 89596100 -110034050 - L1MDa LINE L1 -5201 1208 930 292 229 110 28 chr5 89596142 89596251 -110033899 - L1ME4a LINE L1 -21 6100 5983 380 246 135 24 chr5 89596310 89596436 -110033714 - MIR SINE MIR -120 142 3 579 206 137 8 chr5 89596756 89596887 -110033263 - MER6B DNA MER2_type -55 155 8 2254 82 0 4 chr5 89597700 89598032 -110032118 - AluSc SINE Alu 0 332 2 2343 109 0 3 chr5 89598273 89598585 -110031565 - AluSx SINE Alu -1 311 1 1760 116 8 11 chr5 89598665 89598933 -110031217 - AluSx SINE Alu -8 304 38 287 239 99 86 chr5 89599070 89599313 -110030837 + MER112 DNA MER1_type 4 249 -11 412 181 0 36 chr5 89599388 89599471 -110030679 + MER112 DNA MER1_type 2 81 -179 287 157 45 22 chr5 89599476 89599565 -110030585 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 515 130 0 71 chr5 89599583 89599767 -110030383 + (TA)n Simple_repeat Simple_repeat 2 172 0 1450 244 233 27 chr5 89600310 89601083 -110029067 - L1MC4 LINE L1 -2 8040 7109 1754 187 7 0 chr5 89601167 89601472 -110028678 - AluJb SINE Alu -5 307 1 4409 172 80 1 chr5 89601906 89602767 -110027383 - L1MC1 LINE L1 -6 6607 5679 1549 177 18 18 chr5 89602812 89603094 -110027056 + AluJb SINE Alu 1 282 -30 1942 143 82 26 chr5 89603108 89603485 -110026665 + MSTB LTR MaLR 29 426 0 9985 198 94 26 chr5 89603487 89605742 -110024408 - L1MC1 LINE L1 -743 5683 3581 1451 218 48 0 chr5 89605742 89606036 -110024114 - 7SLRNA srpRNA srpRNA -12 308 1 9985 198 94 26 chr5 89606036 89607054 -110023096 - L1MC1 LINE L1 -2845 3581 2633 190 70 0 47 chr5 89607054 89607097 -110023053 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1517 178 15 26 chr5 89607101 89607371 -110022779 - AluJb SINE Alu -42 270 4 9985 198 94 26 chr5 89607371 89607385 -110022765 - L1MC1 LINE L1 -3795 2631 2619 2040 146 0 0 chr5 89607385 89607679 -110022471 - AluSx SINE Alu -18 294 1 9985 198 94 26 chr5 89607679 89609674 -110020476 - L1MC1 LINE L1 -3807 2619 41 2548 58 0 13 chr5 89609690 89610002 -110020148 + AluY SINE Alu 1 308 -3 234 268 72 43 chr5 89610501 89610569 -110019581 - MER103 DNA DNA -9 157 92 932 48 81 0 chr5 89610569 89610693 -110019457 - MER85 DNA T2_type -2 137 4 234 268 72 43 chr5 89610693 89610762 -110019388 - MER103 DNA DNA -74 92 16 560 196 0 9 chr5 89611099 89611211 -110018939 - L1MA9 LINE L1 -38 6274 6164 234 0 0 0 chr5 89611211 89611237 -110018913 + (TG)n Simple_repeat Simple_repeat 1 26 0 662 126 0 36 chr5 89611250 89611361 -110018789 - U6 snRNA snRNA 0 107 1 1406 173 3 44 chr5 89611649 89611944 -110018206 + AluJo SINE Alu 1 283 -29 614 212 0 36 chr5 89611947 89612084 -110018066 + FLAM_A SINE Alu 1 132 -1 2248 245 52 50 chr5 89612905 89613160 -110016990 - L1ME3A LINE L1 -6 6233 5980 1116 124 124 0 chr5 89613160 89613369 -110016781 - MER46A DNA MER2_type 0 236 2 2248 245 52 50 chr5 89613369 89613982 -110016168 - L1ME3A LINE L1 -259 5980 5363 535 252 53 65 chr5 89614171 89614417 -110015733 - L1ME3A LINE L1 -18 6152 5910 374 289 64 0 chr5 89614428 89614584 -110015566 - L1ME3A LINE L1 -1035 5180 5015 228 250 59 0 chr5 89614642 89614710 -110015440 - L1ME3A LINE L1 -1300 4915 4844 743 261 171 16 chr5 89614753 89615298 -110014852 - L1ME3A LINE L1 -2839 3376 2748 599 275 98 62 chr5 89615343 89615396 -110014754 - L1ME3A LINE L1 -3716 2499 2449 2106 119 23 3 chr5 89615396 89615699 -110014451 - AluSq SINE Alu -4 309 1 599 275 98 62 chr5 89615699 89616035 -110014115 - L1ME3A LINE L1 -3766 2449 2126 2034 135 3 0 chr5 89616035 89616331 -110013819 - AluSx SINE Alu -15 297 1 599 275 98 62 chr5 89616331 89616767 -110013383 - L1ME3A LINE L1 -4089 2126 1707 5800 102 38 2 chr5 89616767 89618191 -110011959 + L1PA13 LINE L1 4694 6163 0 599 275 98 62 chr5 89618191 89618392 -110011758 - L1ME3A LINE L1 -4508 1707 1259 1639 158 3 34 chr5 89618434 89618732 -110011418 - AluJo SINE Alu -23 289 1 882 48 0 0 chr5 89618924 89619055 -110011095 + AluY SINE Alu 181 311 0 227 239 109 11 chr5 89619234 89619326 -110010824 - L1M4 LINE L1 -2856 3290 3190 250 212 0 30 chr5 89620166 89620232 -110009918 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 1599 165 55 0 chr5 89620268 89620541 -110009609 + MER7A DNA MER2_type 58 343 -3 659 274 42 55 chr5 89620693 89621003 -110009147 - L2 LINE L2 0 3313 3008 232 266 168 0 chr5 89621056 89621169 -110008981 - L1MC/D LINE L1 -1980 5828 5697 3569 189 62 63 chr5 89622250 89622960 -110007190 + Charlie1a DNA MER1_type 30 740 -2021 2923 198 34 20 chr5 89622960 89623555 -110006595 - MER77 LTR ERV1 -2 603 1 3569 189 62 63 chr5 89623555 89623781 -110006369 + Charlie1a DNA MER1_type 740 965 -490 1234 203 49 12 chr5 89623795 89624140 -110006010 + Charlie1a DNA MER1_type 1078 1435 -20 246 376 28 93 chr5 89625107 89625447 -110004703 - L2 LINE L2 -27 3245 2933 2378 88 0 16 chr5 89625447 89625764 -110004386 + AluSp SINE Alu 1 312 -1 246 376 28 93 chr5 89625764 89625822 -110004328 - L2 LINE L2 -339 2933 2873 931 171 195 69 chr5 89626728 89627107 -110003043 - MSTC LTR MaLR -1 427 1 2071 142 0 0 chr5 89628446 89628742 -110001408 - AluSx SINE Alu -15 297 2 194 343 27 0 chr5 89628962 89629035 -110001115 + MIR3 SINE MIR 121 195 -13 1983 159 0 0 chr5 89629195 89629496 -110000654 - AluJb SINE Alu -11 301 1 257 247 0 65 chr5 89629742 89629819 -110000331 - L2 LINE L2 -13 3300 3229 1999 141 146 8 chr5 89629927 89630303 -109999847 - MSTA LTR MaLR 0 428 1 9434 133 14 38 chr5 89630307 89631917 -109998233 - MSTA-int LTR MaLR -6 1574 3 1898 152 149 11 chr5 89631919 89632295 -109997855 - MSTA LTR MaLR 0 428 1 1897 180 71 96 chr5 89632775 89633557 -109996593 - MER21A LTR ERV1 0 931 62 1855 146 89 32 chr5 89633557 89633723 -109996427 + MSTB LTR MaLR 1 156 -270 1962 149 6 56 chr5 89633723 89634078 -109996072 + MER1B DNA MER1_type 1 337 0 1855 146 89 32 chr5 89634078 89634280 -109995870 + MSTB LTR MaLR 156 390 -36 365 65 0 0 chr5 89634293 89634339 -109995811 - MER21A LTR ERV1 -865 66 21 254 371 72 19 chr5 89634394 89634715 -109995435 - L2 LINE L2 -837 2477 2140 275 231 0 31 chr5 89634839 89634904 -109995246 + L2 LINE L2 3249 3311 -2 468 371 47 35 chr5 89635281 89635599 -109994551 + L2 LINE L2 2916 3237 -35 222 283 0 0 chr5 89636191 89636237 -109993913 + (CA)n Simple_repeat Simple_repeat 2 47 0 27 0 0 0 chr5 89636502 89636529 -109993621 + AT_rich Low_complexity Low_complexity 1 27 0 2667 84 11 24 chr5 89636541 89636921 -109993229 - THE1C LTR MaLR 0 375 1 1503 206 7 3 chr5 89637535 89637831 -109992319 - AluJb SINE Alu -15 297 1 907 216 83 37 chr5 89638645 89638886 -109991264 - MIR SINE MIR -6 256 5 2163 117 0 7 chr5 89639243 89639543 -109990607 + AluSx SINE Alu 1 298 -14 195 279 59 15 chr5 89639593 89639661 -109990489 + L3 LINE CR1 1503 1573 -4 24 0 0 0 chr5 89640296 89640320 -109989830 + AT_rich Low_complexity Low_complexity 1 24 0 1629 189 10 7 chr5 89640729 89641025 -109989125 + AluJb SINE Alu 6 302 -10 237 349 0 0 chr5 89645571 89645637 -109984513 + Charlie1a DNA MER1_type 1 66 -1389 1788 152 118 55 chr5 89645657 89646091 -109984059 - MLT2B1 LTR ERVL -59 461 1 4560 181 109 18 chr5 89646091 89646445 -109983705 + Charlie1a DNA MER1_type 60 380 -2381 1968 157 7 0 chr5 89646445 89646745 -109983405 - AluSx SINE Alu -10 302 1 4560 181 109 18 chr5 89646745 89646983 -109983167 + Charlie1a DNA MER1_type 380 595 -2166 2161 114 7 0 chr5 89646983 89647289 -109982861 - AluSq SINE Alu -5 308 1 4560 181 109 18 chr5 89647289 89647935 -109982215 + Charlie1a DNA MER1_type 595 1441 -14 21 71 0 0 chr5 89648037 89648079 -109982071 + AT_rich Low_complexity Low_complexity 1 42 0 235 377 32 13 chr5 89649297 89649451 -109980699 - MIR SINE MIR -100 162 6 28 29 0 0 chr5 89649491 89649526 -109980624 + AT_rich Low_complexity Low_complexity 1 35 0 1896 133 0 30 chr5 89649904 89650065 -109980085 - AluSx SINE Alu -21 291 142 288 0 0 0 chr5 89650065 89650097 -109980053 + (TA)n Simple_repeat Simple_repeat 1 32 0 1896 133 0 30 chr5 89650097 89650235 -109979915 - AluSx SINE Alu -170 142 1 249 300 100 14 chr5 89650855 89650925 -109979225 - MIR SINE MIR -110 98 23 283 302 107 40 chr5 89651112 89651337 -109978813 + L3 LINE CR1 761 1000 -577 583 198 25 8 chr5 89651570 89651691 -109978459 + L2 LINE L2 3191 3313 0 27 49 0 0 chr5 89652789 89652830 -109977320 + AT_rich Low_complexity Low_complexity 1 41 0 21 71 0 0 chr5 89652896 89652938 -109977212 + AT_rich Low_complexity Low_complexity 1 42 0 2021 151 3 0 chr5 89653711 89654022 -109976128 - AluSx SINE Alu 0 312 1 229 297 0 54 chr5 89654022 89654096 -109976054 - Charlie8 DNA MER1_type -1 2416 2347 351 152 13 51 chr5 89654323 89654402 -109975748 - Charlie8 DNA MER1_type -2226 191 116 21 0 0 0 chr5 89654424 89654445 -109975705 + AT_rich Low_complexity Low_complexity 1 21 0 269 333 87 55 chr5 89654783 89655002 -109975148 + L2 LINE L2 2504 2729 -585 4888 148 54 11 chr5 89655007 89655877 -109974273 + L1MA3 LINE L1 5371 6277 -28 22 0 0 0 chr5 89655908 89655930 -109974220 + AT_rich Low_complexity Low_complexity 1 22 0 1621 162 26 49 chr5 89656074 89656382 -109973768 - AluJo SINE Alu -11 301 1 686 164 7 36 chr5 89656567 89656707 -109973443 - AluJo SINE Alu -176 136 1 311 286 186 19 chr5 89656970 89657131 -109973019 - L3 LINE CR1 -39 1538 1351 13122 139 44 25 chr5 89662573 89664737 -109965413 + Tigger1 DNA MER2_type 1 2218 -200 1460 191 61 0 chr5 89664737 89665015 -109965135 - AluJo SINE Alu -6 306 12 13122 139 44 25 chr5 89665015 89665220 -109964930 + Tigger1 DNA MER2_type 2218 2417 -1 499 237 93 0 chr5 89665243 89665361 -109964789 + L2 LINE L2 3183 3311 -2 222 204 37 0 chr5 89665564 89665618 -109964532 + (TA)n Simple_repeat Simple_repeat 2 57 0 1687 102 0 0 chr5 89665851 89666077 -109964073 + AluY SINE Alu 75 300 -11 497 227 106 7 chr5 89666641 89666782 -109963368 - MIR SINE MIR -11 251 97 * 1107 311 144 19 chr5 89666769 89667529 -109962621 + L2 LINE L2 2440 3306 -7 3171 211 133 61 chr5 89668023 89668478 -109961672 - Looper DNA T2_type -9 1549 1128 2003 102 11 7 chr5 89668478 89668763 -109961387 - AluSq SINE Alu -13 300 15 3171 211 133 61 chr5 89668763 89669444 -109960706 - Looper DNA T2_type -430 1128 286 628 244 150 5 chr5 89669444 89669637 -109960513 - MER58A DNA MER1_type 0 224 4 3171 211 133 61 chr5 89669637 89669936 -109960214 - Looper DNA T2_type -1272 286 10 252 86 0 0 chr5 89671236 89671271 -109958879 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 359 204 159 15 chr5 89672791 89672923 -109957227 + MER103 DNA DNA 7 157 -9 23 0 0 0 chr5 89674121 89674144 -109956006 + AT_rich Low_complexity Low_complexity 1 23 0 1309 174 35 39 chr5 89675175 89675486 -109954664 + AluJo SINE Alu 3 312 0 466 284 138 86 chr5 89676141 89676931 -109953219 - L1MEd LINE L1 -4747 1649 786 246 246 53 44 chr5 89677257 89677371 -109952779 - L1MEd LINE L1 -5924 281 167 1942 124 0 0 chr5 89728379 89728652 -109901498 - AluSx SINE Alu -1 311 39 201 39 0 0 chr5 89729355 89729381 -109900769 + (CA)n Simple_repeat Simple_repeat 1 26 0 389 136 12 49 chr5 89730051 89730132 -109900018 + MER31A LTR ERV1 1 78 -388 743 145 0 92 chr5 89730151 89730303 -109899847 - Tigger5 DNA MER2_type 0 2323 2186 * 1026 183 102 0 chr5 89730302 89730488 -109899662 - Tigger5 DNA MER2_type -2118 205 1 * 1322 187 41 35 chr5 89730488 89730845 -109899305 + MER31A LTR ERV1 94 471 -14 582 216 35 29 chr5 89730852 89731023 -109899127 + MIR SINE MIR 91 262 0 325 283 159 9 chr5 89731660 89731773 -109898377 - MER5A DNA MER1_type -1 188 59 547 224 146 18 chr5 89731790 89731955 -109898195 - MER5A DNA MER1_type -2 187 2 668 209 88 39 chr5 89732361 89732543 -109897607 + MER58B DNA MER1_type 1 191 -150 869 214 65 123 chr5 89732677 89733018 -109897132 - MLT2B1 LTR ERVL -67 347 27 4017 154 63 22 chr5 89733020 89733784 -109896366 - ERVL-B1 LTR ERVL -6 5758 4964 836 69 0 0 chr5 89733801 89733902 -109896248 - U6 snRNA snRNA -6 101 1 3103 150 14 27 chr5 89733907 89734426 -109895724 - ERVL-B1 LTR ERVL -820 4944 4433 6043 206 39 25 chr5 89734442 89735702 -109894448 - ERVL-B1 LTR ERVL -4315 1449 173 1063 223 94 87 chr5 89735727 89736131 -109894019 - MLT2B1 LTR ERVL -56 408 2 875 178 0 31 chr5 89736138 89736301 -109893849 + MER58B DNA MER1_type 180 337 -4 265 354 208 0 chr5 89736314 89736458 -109893692 - MER5A DNA MER1_type -1 188 15 2176 117 0 0 chr5 89736678 89736976 -109893174 - AluSq SINE Alu -15 298 1 2072 93 20 27 chr5 89737817 89738117 -109892033 - AluSx SINE Alu -14 298 1 255 373 39 42 chr5 89738637 89738670 -109891480 + L2 LINE L2 2648 2680 -634 361 298 22 39 chr5 89738670 89738851 -109891299 + MER5B DNA MER1_type 1 178 0 255 373 39 42 chr5 89738851 89739101 -109891049 + L2 LINE L2 2680 2930 -384 1174 171 60 12 chr5 89739635 89739886 -109890264 - ORSL DNA AcHobo 0 275 13 6880 41 11 5 chr5 89740216 89741386 -109888764 - L1PA7 LINE L1 0 6154 4963 2053 82 0 0 chr5 89741388 89741667 -109888483 - L1P LINE L1 -1078 5068 4790 2757 31 0 0 chr5 89742389 89742743 -109887407 + L1PA3 LINE L1 5817 6170 0 250 323 46 15 chr5 89742873 89743003 -109887147 + MLT1K LTR MaLR 192 325 -263 254 118 0 0 chr5 89743423 89743457 -109886693 - U2 snRNA snRNA -154 34 1 485 188 188 0 chr5 89743458 89743570 -109886580 - FLAM_A SINE Alu 0 133 1 465 194 10 48 chr5 89743581 89743684 -109886466 - MER31A LTR ERV1 -28 457 359 32 26 0 0 chr5 89743709 89743748 -109886402 + AT_rich Low_complexity Low_complexity 1 39 0 1157 213 39 16 chr5 89744060 89744318 -109885832 - LTR40a LTR ERVL 0 519 256 1798 185 19 27 chr5 89745883 89746251 -109883899 + MLT1A1 LTR MaLR 1 365 0 271 300 89 45 chr5 89746735 89746921 -109883229 - MIR SINE MIR -65 197 8 225 357 31 10 chr5 89747511 89747609 -109882541 + MIR SINE MIR 1 100 -162 25 31 0 0 chr5 89748008 89748040 -109882110 + AT_rich Low_complexity Low_complexity 1 32 0 314 189 9 0 chr5 89748675 89748781 -109881369 + (CA)n Simple_repeat Simple_repeat 2 108 0 503 219 89 16 chr5 89750344 89750467 -109879683 + MER5B DNA MER1_type 1 132 -46 464 266 45 81 chr5 89750536 89750689 -109879461 - L1MC4 LINE L1 -108 7934 7777 1611 130 57 70 chr5 89750689 89750990 -109879160 + AluSx SINE Alu 1 297 -15 464 266 45 81 chr5 89750990 89751170 -109878980 - L1MC4 LINE L1 -265 7777 7613 22 0 0 0 chr5 89751172 89751194 -109878956 + AT_rich Low_complexity Low_complexity 1 22 0 6628 155 21 25 chr5 89751315 89752792 -109877358 - L1MA8 LINE L1 -5 6286 4804 221 56 0 28 chr5 89752792 89752828 -109877322 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 6628 155 21 25 chr5 89752828 89752847 -109877303 - L1MA8 LINE L1 -1487 4804 4786 2040 86 0 4 chr5 89752847 89753114 -109877036 - AluY SINE Alu -45 266 1 6628 155 21 25 chr5 89753114 89753867 -109876283 - L1MA8 LINE L1 -1505 4786 4047 273 331 97 24 chr5 89754408 89754532 -109875618 + L2 LINE L2 3139 3271 -1 2024 123 0 3 chr5 89754625 89754918 -109875232 + AluSg1 SINE Alu 3 294 -15 13681 131 39 4 chr5 89754972 89757165 -109872985 - Tigger1 DNA MER2_type 0 2418 150 25 65 0 0 chr5 89757174 89757220 -109872930 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr5 89757279 89757314 -109872836 + AT_rich Low_complexity Low_complexity 1 35 0 250 326 0 61 chr5 89757769 89757867 -109872283 - L2 LINE L2 -167 3105 3014 304 346 8 31 chr5 89757987 89758117 -109872033 - L2 LINE L2 -1 3271 3145 576 333 47 18 chr5 89758153 89758495 -109871655 - L2 LINE L2 -508 2806 2455 5350 50 4 4 chr5 89758500 89759206 -109870944 - L1P LINE L1 -4410 1736 1031 648 348 59 10 chr5 89759490 89759886 -109870264 - LTR16B LTR ERVL -76 388 1 22 0 0 0 chr5 89760879 89760901 -109869249 + AT_rich Low_complexity Low_complexity 1 22 0 552 209 101 0 chr5 89761025 89761154 -109868996 + MLT1F1 LTR MaLR 1 142 -425 788 250 43 5 chr5 89761390 89761578 -109868572 + MIR SINE MIR 60 254 -8 27 29 0 0 chr5 89761602 89761636 -109868514 + AT_rich Low_complexity Low_complexity 1 34 0 1533 135 19 10 chr5 89761636 89762009 -109868141 - L1P4 LINE L1 -670 5496 5115 194 0 39 0 chr5 89762009 89762035 -109868115 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1533 135 19 10 chr5 89762035 89762056 -109868094 - L1P4 LINE L1 -1051 5115 5096 3804 108 73 5 chr5 89762064 89762668 -109867482 + L1PA16 LINE L1 5513 6157 -9 225 132 0 0 chr5 89766167 89766205 -109863945 + (T)n Simple_repeat Simple_repeat 1 38 0 812 171 77 43 chr5 89767750 89768038 -109862112 - MER33 DNA MER1_type 0 363 10 243 380 42 78 chr5 89769118 89769479 -109860671 - L2 LINE L2 0 3272 2925 1735 169 40 3 chr5 89769491 89769792 -109860358 - AluJb SINE Alu 0 312 1 280 225 12 0 chr5 89770745 89770825 -109859325 + (TA)n Simple_repeat Simple_repeat 2 82 0 494 307 10 16 chr5 89770937 89771129 -109859021 + LTR16C LTR ERVL 287 477 -14 2043 144 73 14 chr5 89771463 89771831 -109858319 - MLT1B LTR MaLR 0 390 1 1297 268 60 41 chr5 89772075 89773075 -109857075 - L1ME3A LINE L1 -232 5938 4915 599 164 8 8 chr5 89773153 89773287 -109856863 - L1MA4A LINE L1 0 7005 6872 3550 143 14 8 chr5 89773292 89774380 -109855770 - L1PB1 LINE L1 -2 6149 4868 * 6444 189 13 1 chr5 89774378 89775640 -109854510 + L1PB1 LINE L1 3591 4867 -1279 * 10598 174 34 13 chr5 89775639 89778729 -109851421 - L1MA4A LINE L1 -117 6888 3729 9402 83 8 5 chr5 89778738 89780830 -109849320 - L1PA7 LINE L1 0 6154 4054 1267 266 16 3 chr5 89780830 89781153 -109848997 - L1MA4A LINE L1 -6513 336 10 26 88 0 0 chr5 89781484 89781552 -109848598 + AT_rich Low_complexity Low_complexity 1 68 0 2586 56 0 18 chr5 89781552 89781893 -109848257 - L1PA7 LINE L1 -2 6152 5818 311 327 13 53 chr5 89781913 89782063 -109848087 - MIR3 SINE MIR -35 173 30 1979 141 13 0 chr5 89782730 89783036 -109847114 + AluSx SINE Alu 3 312 0 685 186 107 29 chr5 89783328 89783639 -109846511 - LTR54B LTR ERV1 -131 367 1 1439 239 63 7 chr5 89783641 89784056 -109846094 - L1MEc LINE L1 -1140 5075 4638 1168 135 62 97 chr5 89784058 89784398 -109845752 - MER33 DNA MER1_type -6 318 1 2752 228 52 33 chr5 89784495 89785050 -109845100 - L1MEc LINE L1 -1689 4526 3944 2379 56 10 13 chr5 89785050 89785356 -109844794 - AluY SINE Alu -6 305 1 2752 228 52 33 chr5 89785356 89785771 -109844379 - L1MEc LINE L1 -2271 3944 3538 29463 125 17 50 chr5 89785780 89792167 -109837983 + L1PA8 LINE L1 5 6172 0 3282 258 52 9 chr5 89792231 89793373 -109836777 - L1MEc LINE L1 -2685 3530 2339 509 226 210 22 chr5 89794016 89794197 -109835953 + MIR SINE MIR 48 262 0 227 307 34 23 chr5 89794191 89794279 -109835871 + MIR SINE MIR 66 154 -108 * 281 366 7 7 chr5 89794401 89794543 -109835607 + L2 LINE L2 734 875 -2439 3494 115 40 14 chr5 89794988 89795561 -109834589 + Tigger1 DNA MER2_type 1722 2309 -109 1240 206 45 15 chr5 89795638 89795905 -109834245 - AluJo SINE Alu -22 290 16 782 155 0 0 chr5 89795908 89796024 -109834126 + Tigger1 DNA MER2_type 2301 2416 -2 1449 259 82 37 chr5 89796025 89796566 -109833584 - L1MEc LINE L1 -4033 2363 1781 2000 119 10 3 chr5 89796566 89796861 -109833289 - AluSx SINE Alu -15 297 1 1449 259 82 37 chr5 89796861 89797029 -109833121 - L1MEc LINE L1 -4615 1781 1622 * 3047 188 69 17 chr5 89797019 89797667 -109832483 - L1MA10 LINE L1 -1 6333 5652 3155 46 8 0 chr5 89797669 89798062 -109832088 - L1PA7 LINE L1 0 6154 5759 23054 90 10 2 chr5 89798065 89801638 -109828512 - L1PA7 LINE L1 -981 5165 1577 7573 103 20 9 chr5 89801636 89802836 -109827314 + L1PA7 LINE L1 683 1890 -4571 * 11458 209 33 49 chr5 89802805 89805635 -109824515 - L1M2 LINE L1 -615 5933 3059 2156 115 7 0 chr5 89805635 89805931 -109824219 - AluSp SINE Alu -15 298 1 11458 209 33 49 chr5 89805931 89806044 -109824106 - L1M2 LINE L1 -3489 3059 2946 201 39 0 0 chr5 89806044 89806070 -109824080 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1717 181 0 7 chr5 89806077 89806354 -109823796 - AluSx SINE Alu -35 277 3 11458 209 33 49 chr5 89806354 89807301 -109822849 - L1M2 LINE L1 -3608 2940 2092 726 199 15 0 chr5 89807393 89807524 -109822626 - FLAM_A SINE Alu 0 133 1 542 299 48 11 chr5 89807646 89807833 -109822317 - L1M2 LINE L1 -5132 1181 988 2288 107 21 48 chr5 89807871 89808245 -109821905 + THE1B LTR MaLR 1 364 0 551 250 75 0 chr5 89808659 89808779 -109821371 - L1M2 LINE L1 -5752 561 433 1840 214 35 35 chr5 89808779 89809297 -109820853 + L1PB4 LINE L1 2346 2863 -3986 * 5614 186 48 13 chr5 89809291 89811060 -109819090 + L1PB4 LINE L1 4675 6531 -327 405 0 0 0 chr5 89811060 89811105 -109819045 + (CA)n Simple_repeat Simple_repeat 2 46 0 5614 186 48 13 chr5 89811105 89811446 -109818704 + L1PB4 LINE L1 6531 6858 0 451 295 90 6 chr5 89811830 89811986 -109818164 - MIR SINE MIR -38 224 56 310 309 49 60 chr5 89812226 89812491 -109817659 - MLT1K LTR MaLR -15 573 312 1888 173 158 174 chr5 89812548 89813577 -109816573 + LTR28 LTR ERV1 8 1020 0 301 261 63 111 chr5 89813590 89813797 -109816353 - MLT1K LTR MaLR -348 240 44 1989 137 45 17 chr5 89816534 89816892 -109813258 + L1PA16 LINE L1 5798 6165 -1 21 0 0 0 chr5 89817015 89817036 -109813114 + AT_rich Low_complexity Low_complexity 1 21 0 34 55 0 0 chr5 89818216 89818271 -109811879 + AT_rich Low_complexity Low_complexity 1 55 0 2014 135 0 7 chr5 89818271 89818560 -109811590 - AluSx SINE Alu -25 287 1 246 176 0 0 chr5 89819213 89819264 -109810886 + A-rich Low_complexity Low_complexity 1 51 0 2504 241 37 15 chr5 89819375 89819818 -109810332 + L1MB5 LINE L1 3976 4444 -1702 3075 165 21 12 chr5 89819818 89820333 -109809817 + MLT2B1 LTR ERVL 1 520 0 2504 241 37 15 chr5 89820333 89820644 -109809506 + L1MB5 LINE L1 4444 4747 -1399 502 154 0 0 chr5 89820644 89820722 -109809428 + U3 snRNA snRNA 1 78 -139 14004 181 17 11 chr5 89820725 89823420 -109806730 + L1P LINE L1 1996 4709 -1437 2179 132 0 0 chr5 89823420 89823724 -109806426 + AluSc SINE Alu 1 304 -5 14004 181 17 11 chr5 89823724 89823778 -109806372 + L1P LINE L1 4709 4761 -1385 3650 115 0 4 chr5 89823778 89824291 -109805859 + MER9 LTR ERVK 1 511 0 43083 66 2 4 chr5 89824291 89829573 -109800577 + HERVK9 LTR ERVK 1 5270 -646 16857 58 0 0 chr5 89829573 89832533 -109797617 + L1PA5 LINE L1 3199 6153 -1 43083 66 2 4 chr5 89832533 89832687 -109797463 + HERVK9 LTR ERVK 5270 5423 -493 1238 65 12 12 chr5 89832687 89832857 -109797293 + MER9 LTR ERVK 295 464 -47 3358 82 62 0 chr5 89832862 89833313 -109796837 + HERVK9 LTR ERVK 5438 5916 0 3661 102 4 4 chr5 89833313 89833822 -109796328 + MER9 LTR ERVK 1 509 -2 1636 192 27 84 chr5 89833825 89834347 -109795803 + L1MB5 LINE L1 4757 5248 -898 1165 230 40 0 chr5 89834345 89834720 -109795430 + L1MB5 LINE L1 5711 6136 -38 * 423 358 153 11 chr5 89834922 89835288 -109794862 + HAL1 LINE L1 1115 1532 -975 281 221 42 11 chr5 89835511 89835606 -109794544 + (TA)n Simple_repeat Simple_repeat 2 99 0 2013 154 0 6 chr5 89835693 89836005 -109794145 + AluSx SINE Alu 1 310 -2 302 293 61 10 chr5 89836484 89836682 -109793468 + L1M4 LINE L1 2183 2390 -3756 361 281 41 18 chr5 89837074 89837295 -109792855 + L1M4 LINE L1 2792 3017 -3129 198 0 0 0 chr5 89837542 89837564 -109792586 + (TATG)n Simple_repeat Simple_repeat 4 25 0 859 114 15 0 chr5 89837690 89837821 -109792329 - MER50 LTR ERV1 -24 710 578 308 169 0 42 chr5 89837814 89837885 -109792265 - MER50 LTR ERV1 -260 474 407 * 1583 146 4 8 chr5 89837891 89838138 -109792012 - MER50 LTR ERV1 -488 246 1 302 240 70 40 chr5 89838333 89838433 -109791717 + L1M4 LINE L1 3872 3974 -2172 1702 181 0 20 chr5 89838821 89839119 -109791031 - AluJb SINE Alu -18 294 3 2834 286 45 30 chr5 89839166 89840105 -109790045 + MER45C DNA AcHobo 1 953 0 1959 137 13 13 chr5 89840165 89840471 -109789679 - AluSx SINE Alu -6 306 1 1549 124 4 0 chr5 89840794 89841036 -109789114 + MER46B DNA MER2_type 119 236 0 318 26 0 0 chr5 89841256 89841295 -109788855 + (CA)n Simple_repeat Simple_repeat 2 40 0 734 179 110 29 chr5 89841557 89841730 -109788420 - MER90 LTR ERV1 -6 569 383 682 212 114 33 chr5 89841750 89841934 -109788216 - MER90 LTR ERV1 -415 199 1 1770 117 94 47 chr5 89842758 89843056 -109787094 + AluSx SINE Alu 1 312 0 637 196 11 17 chr5 89843241 89843420 -109786730 + CT-rich Low_complexity Low_complexity 3 180 0 222 146 0 49 chr5 89844950 89844991 -109785159 + (TCCC)n Simple_repeat Simple_repeat 3 41 0 637 304 74 39 chr5 89845756 89846092 -109784058 + LTR16C LTR ERVL 142 489 -2 260 281 169 0 chr5 89846472 89846561 -109783589 - L2 LINE L2 0 3272 3169 * 416 176 130 56 chr5 89846530 89846638 -109783512 + MIR SINE MIR 135 250 -12 881 73 16 0 chr5 89846810 89846933 -109783217 + L1PA4 LINE L1 6027 6151 -4 33 0 0 0 chr5 89846933 89846966 -109783184 + AT_rich Low_complexity Low_complexity 1 33 0 389 66 96 18 chr5 89846966 89847133 -109783017 + (TA)n Simple_repeat Simple_repeat 1 180 0 73 0 0 0 chr5 89847133 89847206 -109782944 + AT_rich Low_complexity Low_complexity 1 73 0 318 175 0 100 chr5 89847317 89847397 -109782753 - L2 LINE L2 0 3313 3242 308 169 42 28 chr5 89847674 89847745 -109782405 + Charlie8 DNA MER1_type 152 223 -2194 1630 278 80 73 chr5 89847758 89848739 -109781411 - HAL1 LINE L1 -357 2150 1177 207 0 0 0 chr5 89848739 89848762 -109781388 + (CTG)n Simple_repeat Simple_repeat 1 23 0 1630 278 80 73 chr5 89848762 89848995 -109781155 - HAL1 LINE L1 -1330 1177 947 1138 51 23 17 chr5 89848995 89849171 -109780979 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 1630 278 80 73 chr5 89849171 89849507 -109780643 - HAL1 LINE L1 -1560 947 588 285 98 0 0 chr5 89849621 89849662 -109780488 + (TG)n Simple_repeat Simple_repeat 1 41 0 547 329 75 24 chr5 89849727 89850170 -109779980 - L2 LINE L2 -208 3105 2641 386 274 120 0 chr5 89851574 89851691 -109778459 + MER94 DNA DNA 3 133 -1 24 32 0 0 chr5 89851793 89851824 -109778326 + AT_rich Low_complexity Low_complexity 1 31 0 251 211 0 13 chr5 89851916 89851992 -109778158 + (TA)n Simple_repeat Simple_repeat 2 76 0 292 111 0 0 chr5 89852175 89852220 -109777930 + L2 LINE L2 3268 3312 -1 344 301 0 0 chr5 89852297 89852380 -109777770 - L3 LINE CR1 -802 775 693 23 33 0 0 chr5 89853301 89853331 -109776819 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 89853825 89853846 -109776304 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 89855659 89855683 -109774467 + AT_rich Low_complexity Low_complexity 1 24 0 861 260 95 76 chr5 89858152 89858890 -109771260 + L2 LINE L2 2565 3312 -1 238 250 38 0 chr5 89859191 89859271 -109770879 + CT-rich Low_complexity Low_complexity 2 84 0 25 75 0 0 chr5 89860410 89860463 -109769687 + AT_rich Low_complexity Low_complexity 1 53 0 4384 50 2 0 chr5 89861325 89861865 -109768285 - L1PA5 LINE L1 -1 6153 5613 1627 182 3 7 chr5 89861879 89862187 -109767963 - L1 LINE L1 -1867 4279 3973 625 302 118 43 chr5 89862281 89862653 -109767497 + L2 LINE L2 2616 3016 -297 2095 30 0 0 chr5 89862678 89863251 -109766899 - L1PA4 LINE L1 0 6155 5493 * 3895 27 0 16 chr5 89863248 89863826 -109766324 + L1PA4 LINE L1 4917 5485 -670 424 289 155 50 chr5 89863882 89864165 -109765985 - L1M4 LINE L1 -1523 4623 4371 2069 127 0 0 chr5 89864165 89864456 -109765694 - AluSq SINE Alu -22 291 1 424 289 155 50 chr5 89864456 89864650 -109765500 - L1M4 LINE L1 -1775 4371 4096 744 242 160 13 chr5 89865535 89865766 -109764384 - LTR16A1 LTR ERVL 0 457 193 473 316 146 45 chr5 89865865 89866014 -109764136 - L1 LINE L1 -1127 5019 4886 180 0 0 0 chr5 89866014 89866034 -109764116 + (TA)n Simple_repeat Simple_repeat 2 21 0 473 316 146 45 chr5 89866034 89866418 -109763732 - L1 LINE L1 -1260 4886 4432 1789 260 37 0 chr5 89866709 89867144 -109763006 - ERVL LTR ERVL -954 4810 4360 2300 107 19 26 chr5 89867145 89867511 -109762639 - THE1C LTR MaLR -10 422 1 9691 126 51 10 chr5 89867511 89869028 -109761122 - THE1C-int LTR MaLR 0 1580 1 2379 128 19 16 chr5 89869028 89869402 -109760748 - THE1C LTR MaLR 0 375 1 1023 270 45 9 chr5 89869450 89869883 -109760267 - ERVL LTR ERVL -1458 4196 3658 251 302 148 30 chr5 89870798 89870967 -109759183 + MIR SINE MIR 57 245 -17 1748 254 54 32 chr5 89871132 89871778 -109758372 - L1MC4 LINE L1 -145 7897 7238 1715 226 98 26 chr5 89871779 89872102 -109758048 - L1MC4 LINE L1 -963 7079 6700 2497 235 34 21 chr5 89872102 89872728 -109757422 + LTR27 LTR ERV1 3 636 0 1715 226 98 26 chr5 89872728 89872945 -109757205 - L1MC4 LINE L1 -1342 6700 6500 272 242 61 67 chr5 89873502 89873667 -109756483 - L1MEd LINE L1 -5940 179 16 441 147 29 0 chr5 89875251 89875319 -109754831 + MER5A DNA MER1_type 15 84 -105 11177 101 7 2 chr5 89875757 89878169 -109751981 - L1PA7 LINE L1 -3 6466 4040 10000 107 10 6 chr5 89878169 89879678 -109750472 - L1P LINE L1 -2147 3999 2485 * 11697 115 8 5 chr5 89879671 89881363 -109748787 - L1PA7 LINE L1 -4758 1703 8 22 56 0 0 chr5 89881552 89881588 -109748562 + AT_rich Low_complexity Low_complexity 1 36 0 220 359 0 16 chr5 89881623 89881687 -109748463 + MER91 DNA MER1_type 127 189 -1 573 330 121 47 chr5 89883030 89883475 -109746675 - L2 LINE L2 -8 3305 2828 1048 244 66 41 chr5 89883623 89883987 -109746163 + MLT1A2 LTR MaLR 1 373 -1 1543 329 137 21 chr5 89884042 89885159 -109744991 - L2 LINE L2 -1144 2170 925 23 0 0 0 chr5 89885318 89885341 -109744809 + AT_rich Low_complexity Low_complexity 1 23 0 198 368 0 0 chr5 89885403 89885471 -109744679 - MIR SINE MIR -115 147 80 586 257 65 19 chr5 89885548 89885879 -109744271 - MLT1J2 LTR MaLR -64 386 7 2136 75 0 44 chr5 89886258 89886594 -109743556 - AluY SINE Alu 0 323 1 731 267 118 41 chr5 89887530 89887922 -109742228 - MLT1J1 LTR MaLR 0 409 17 294 161 36 18 chr5 89888219 89888275 -109741875 + MLT1D LTR MaLR 1 57 -448 1438 179 92 31 chr5 89888289 89888614 -109741536 + MLT1D LTR MaLR 159 503 -2 241 241 51 0 chr5 89888616 89888695 -109741455 - MER69B DNA AcHobo -230 996 914 42 65 0 0 chr5 89888695 89888772 -109741378 + AT_rich Low_complexity Low_complexity 1 77 0 1464 301 57 0 chr5 89888772 89889264 -109740886 - MER69B DNA AcHobo -329 897 378 4362 155 33 44 chr5 89889333 89890325 -109739825 + MER11C LTR ERVK 1 1070 -1 493 306 40 45 chr5 89890326 89890548 -109739602 - MER69B DNA AcHobo -956 270 50 662 224 0 8 chr5 89891906 89892031 -109738119 - FLAM_A SINE Alu -9 124 1 1136 287 92 71 chr5 89892715 89893392 -109736758 + MER21B LTR ERV1 24 714 -149 182 306 145 0 chr5 89893440 89893502 -109736648 - L2 LINE L2 -61 3211 3141 282 172 11 92 chr5 89893810 89893897 -109736253 - MER116 DNA Mariner 0 80 1 1858 176 52 49 chr5 89895051 89895437 -109734713 - MLT1B LTR MaLR -3 387 1 606 303 101 38 chr5 89896577 89896894 -109733256 + HAL1b LINE L1 13 349 -999 276 347 14 7 chr5 89896909 89897053 -109733097 + HAL1b LINE L1 465 609 -739 2765 83 13 3 chr5 89897202 89897586 -109732564 + L1PA8A LINE L1 5744 6131 0 195 314 151 0 chr5 89897868 89897954 -109732196 + MIR SINE MIR 43 141 -67 264 276 0 0 chr5 89898015 89898073 -109732077 + GA-rich Low_complexity Low_complexity 2 59 0 3258 123 69 9 chr5 89898196 89898750 -109731400 - L1PA14 LINE L1 -2 6159 5573 313 326 37 47 chr5 89898855 89899070 -109731080 - L1M4 LINE L1 -2994 3152 2940 7537 172 33 47 chr5 89899258 89899435 -109730715 - L1MA4 LINE L1 0 6171 5993 2369 85 3 3 chr5 89899435 89899742 -109730408 - AluSc SINE Alu -2 307 1 7537 172 33 47 chr5 89899742 89900621 -109729529 - L1MA4 LINE L1 -178 5993 5103 2370 93 3 3 chr5 89900621 89900932 -109729218 - AluSp SINE Alu -2 311 1 7537 172 33 47 chr5 89900932 89902359 -109727791 - L1MA4 LINE L1 -1068 5103 3643 2646 120 46 37 chr5 89902371 89902429 -109727721 - MLT2A1 LTR ERVL -7 437 381 450 94 0 0 chr5 89902429 89902493 -109727657 + (TA)n Simple_repeat Simple_repeat 1 64 0 2646 120 46 37 chr5 89902493 89902867 -109727283 - MLT2A1 LTR ERVL -63 381 1 43666 90 6 5 chr5 89902867 89903318 -109726832 - HERVL-A1-A2 LTR ERVL 0 5654 5205 216 0 0 0 chr5 89903318 89903342 -109726808 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 43666 90 6 5 chr5 89903342 89908541 -109721609 - HERVL-A1-A2 LTR ERVL -449 5205 1 3101 106 39 14 chr5 89908541 89908983 -109721167 - MLT2A2 LTR ERVL 0 453 1 2418 143 11 3 chr5 89908983 89909340 -109720810 - THE1B LTR MaLR -3 361 1 10375 122 36 28 chr5 89909340 89910907 -109719243 - THE1B-int LTR MaLR 0 1580 1 2741 117 3 16 chr5 89910907 89911276 -109718874 - THE1B LTR MaLR 0 364 1 252 59 0 0 chr5 89911352 89911386 -109718764 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 5573 129 31 12 chr5 89911387 89912300 -109717850 - L1PA14 LINE L1 -2 6159 5231 8417 240 66 30 chr5 89912307 89916162 -109713988 - L1PA12 LINE L1 -3891 3693 10 4893 219 35 19 chr5 89916175 89918142 -109712008 - L1M4 LINE L1 -2577 4988 2949 383 249 263 34 chr5 89969405 89969610 -109660540 - MIR SINE MIR -9 253 2 1923 109 0 30 chr5 89971467 89971771 -109658379 - AluSx SINE Alu -17 295 1 3661 167 20 22 chr5 89971777 89972488 -109657662 + L1MB3 LINE L1 5468 6176 -7 294 282 103 0 chr5 89972840 89972957 -109657193 - MLT1I LTR MaLR -244 165 37 231 202 293 0 chr5 89973349 89973448 -109656702 + MLT1I LTR MaLR 1 128 -281 21 82 0 0 chr5 89973698 89973747 -109656403 + AT_rich Low_complexity Low_complexity 1 49 0 1502 213 62 37 chr5 89974078 89974482 -109655668 + MLT1C LTR MaLR 41 461 -6 2488 55 0 0 chr5 89976229 89976557 -109653593 + AluY SINE Alu 1 328 0 285 200 100 64 chr5 89976662 89976772 -109653378 - MLT1J1 LTR MaLR -329 117 4 284 106 0 0 chr5 89977439 89977486 -109652664 - L1PA8 LINE L1 0 6172 6126 305 256 23 16 chr5 89977587 89977716 -109652434 + Charlie2 DNA MER1_type 2591 2720 -142 7595 27 5 0 chr5 89977727 89978876 -109651274 + L1PA4 LINE L1 5000 6152 -3 473 177 21 0 chr5 89978928 89979024 -109651126 + Charlie2 DNA MER1_type 2732 2829 -33 1058 251 106 42 chr5 89979212 89979730 -109650420 + MLT1H1 LTR MaLR 1 551 -4 274 324 0 0 chr5 89980261 89980329 -109649821 - MIR SINE MIR -164 98 31 2690 113 18 5 chr5 89980581 89980667 -109649483 + L1PB1 LINE L1 5708 5791 -360 387 0 0 0 chr5 89980667 89980710 -109649440 + (CA)n Simple_repeat Simple_repeat 2 44 0 2690 113 18 5 chr5 89980710 89981058 -109649092 + L1PB1 LINE L1 5791 6148 -3 330 320 0 0 chr5 89981106 89981209 -109648941 - L1MC4 LINE L1 -1326 6716 6614 849 185 46 7 chr5 89982268 89982419 -109647731 + FRAM SINE Alu 1 151 -25 1078 71 0 155 chr5 89982431 89982657 -109647493 + AluSc SINE Alu 1 191 -118 223 167 42 21 chr5 89982816 89982864 -109647286 + (TAA)n Simple_repeat Simple_repeat 2 50 0 345 188 78 5 chr5 89983787 89983894 -109646256 - L1MC5 LINE L1 0 8042 7813 626 198 89 108 chr5 89985907 89986165 -109643985 - LTR8 LTR ERV1 -474 253 1 1730 259 111 24 chr5 89986165 89987194 -109642956 - L1MDb LINE L1 -4536 1870 783 1646 191 27 0 chr5 89988013 89988349 -109641801 - L1MB2 LINE L1 -1 6170 5826 1200 122 25 20 chr5 89988353 89988550 -109641600 + THE1B LTR MaLR 14 211 -153 998 275 12 22 chr5 89988650 89989046 -109641104 - LTR16B LTR ERVL -99 365 5 225 386 57 14 chr5 89989094 89989234 -109640916 - L2 LINE L2 -209 3063 2918 201 286 143 0 chr5 89989588 89989686 -109640464 - L2 LINE L2 -1 3312 3201 951 149 26 16 chr5 89989740 89989934 -109640216 - L1MD3 LINE L1 -32 7963 7768 2513 102 3 3 chr5 89989944 89990306 -109639844 - L1PB1 LINE L1 -6 6145 5784 716 124 18 0 chr5 89990306 89990419 -109639731 + L1PB1 LINE L1 5677 5791 -360 1112 110 58 0 chr5 89990433 89990606 -109639544 + L1P5 LINE L1 5462 5644 -507 288 65 152 0 chr5 89990604 89990650 -109639500 - L1MC3 LINE L1 -214 7571 7519 * 628 178 5 2 chr5 89992327 89992453 -109637697 - LTR1 LTR ERV1 -663 122 1 1806 199 65 97 chr5 89992459 89993088 -109637062 - LTR8A LTR ERV1 -118 609 1 1953 261 101 26 chr5 89993088 89994133 -109636017 - L1MDb LINE L1 -4536 1870 783 25 0 0 0 chr5 89994947 89994972 -109635178 + AT_rich Low_complexity Low_complexity 1 25 0 3487 201 77 12 chr5 89994972 89995294 -109634856 - L1MB1 LINE L1 -5 6163 5863 2295 110 22 25 chr5 89995294 89995659 -109634491 + THE1B LTR MaLR 1 364 0 3487 201 77 12 chr5 89995659 89995704 -109634446 - L1MB1 LINE L1 -305 5863 5822 195 42 0 0 chr5 89995704 89995728 -109634422 + (TA)n Simple_repeat Simple_repeat 2 25 0 3487 201 77 12 chr5 89995728 89996253 -109633897 - L1MB1 LINE L1 -346 5822 5212 488 279 69 45 chr5 89996265 89996555 -109633595 - HAL1 LINE L1 -965 1542 1246 180 97 0 0 chr5 89996975 89997006 -109633144 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 707 185 15 7 chr5 89997148 89997283 -109632867 - MER2 DNA MER2_type -1 344 209 297 191 103 16 chr5 89997324 89997450 -109632700 + L1ME4a LINE L1 5982 6118 -3 796 122 46 0 chr5 89997750 89997881 -109632269 - MER2 DNA MER2_type -145 200 64 736 252 113 33 chr5 89999011 89999522 -109630628 - L1ME4a LINE L1 -3 6118 5567 23 33 0 0 chr5 90000652 90000682 -109629468 + AT_rich Low_complexity Low_complexity 1 30 0 558 276 14 77 chr5 90001062 90001283 -109628867 - LTR16A1 LTR ERVL -3 454 248 324 229 53 84 chr5 90001408 90001539 -109628611 - HERVL LTR ERVL -1452 4202 4076 1657 278 152 30 chr5 90001560 90002291 -109627859 - L2 LINE L2 -913 2401 1582 2078 143 0 6 chr5 90002491 90002805 -109627345 + AluSx SINE Alu 1 312 0 230 320 48 30 chr5 90003020 90003251 -109626899 - HAL1b LINE L1 -276 1072 838 1789 213 166 8 chr5 90003251 90003739 -109626411 + MLT1F1 LTR MaLR 3 567 0 29 0 0 0 chr5 90003752 90003781 -109626369 + AT_rich Low_complexity Low_complexity 1 29 0 353 239 46 37 chr5 90003834 90003943 -109626207 - HAL1b LINE L1 -807 541 432 576 210 0 0 chr5 90004008 90004127 -109626023 - L1MC3 LINE L1 -1 7784 7666 276 360 80 15 chr5 90004184 90004448 -109625702 - L2 LINE L2 -1092 2222 1942 485 345 77 43 chr5 90004961 90005428 -109624722 - L1MEd LINE L1 -5104 1015 533 647 141 11 40 chr5 90005709 90005886 -109624264 + CT-rich Low_complexity Low_complexity 3 174 0 187 170 19 19 chr5 90005904 90005957 -109624193 + CT-rich Low_complexity Low_complexity 4 56 0 1565 161 15 15 chr5 90005959 90006233 -109623917 - AluJb SINE Alu -38 274 1 643 219 103 0 chr5 90006330 90006476 -109623674 - MER69A DNA AcHobo -16 161 1 33 73 0 0 chr5 90007097 90007165 -109622985 + AT_rich Low_complexity Low_complexity 1 68 0 23 0 0 0 chr5 90007617 90007640 -109622510 + AT_rich Low_complexity Low_complexity 1 23 0 294 216 0 0 chr5 90008292 90008366 -109621784 + (CA)n Simple_repeat Simple_repeat 1 74 0 652 314 65 16 chr5 90008761 90009009 -109621141 + MIR SINE MIR 3 262 0 191 391 45 15 chr5 90009625 90009758 -109620392 - L2 LINE L2 -2614 700 564 1328 86 0 32 chr5 90010643 90010829 -109619321 + AluSq SINE Alu 1 180 -133 702 76 0 34 chr5 90011017 90011136 -109619014 + AluY SINE Alu 175 289 -22 1184 137 0 0 chr5 90011136 90011319 -109618831 + AluSp SINE Alu 121 303 -10 198 0 0 0 chr5 90011625 90011647 -109618503 + (T)n Simple_repeat Simple_repeat 1 22 0 559 282 137 16 chr5 90012252 90012507 -109617643 - MER102b DNA MER1_type -4 337 52 25 0 0 0 chr5 90013561 90013586 -109616564 + AT_rich Low_complexity Low_complexity 1 25 0 423 0 0 0 chr5 90017257 90017304 -109612846 + (TA)n Simple_repeat Simple_repeat 1 47 0 234 191 0 0 chr5 90018390 90018437 -109611713 + (CATATA)n Simple_repeat Simple_repeat 5 51 0 686 273 68 24 chr5 90019758 90020290 -109609860 - L1M4 LINE L1 -2461 3685 3131 231 196 0 20 chr5 90020313 90020364 -109609786 + MIR3 SINE MIR 156 205 -3 22 35 0 0 chr5 90020560 90020589 -109609561 + AT_rich Low_complexity Low_complexity 1 29 0 4563 195 37 5 chr5 90022622 90023325 -109606825 + L1MB2 LINE L1 4930 5688 -483 1668 194 58 3 chr5 90023325 90023650 -109606500 + MER2 DNA MER2_type 1 343 -1 4563 195 37 5 chr5 90023650 90024150 -109606000 + L1MB2 LINE L1 5688 6170 -1 23 0 0 0 chr5 90024581 90024604 -109605546 + AT_rich Low_complexity Low_complexity 1 23 0 380 291 18 0 chr5 90025726 90025836 -109604314 - MIR SINE MIR -10 252 141 312 330 11 0 chr5 90026060 90026151 -109603999 - MIR SINE MIR -111 151 60 360 286 12 0 chr5 90026573 90026657 -109603493 - L2 LINE L2 0 3313 3229 31 26 0 0 chr5 90028133 90028171 -109601979 + AT_rich Low_complexity Low_complexity 1 38 0 207 326 0 0 chr5 90028195 90028244 -109601906 - L2 LINE L2 -42 3271 3223 520 312 79 66 chr5 90028384 90028762 -109601388 + MLT1J LTR MaLR 92 474 -37 230 322 23 11 chr5 90029551 90029638 -109600512 - L2 LINE L2 0 3313 3226 756 339 50 14 chr5 90029953 90030390 -109599760 - L2 LINE L2 -376 2938 2486 222 175 50 88 chr5 90031672 90031752 -109598398 - MIR SINE MIR -61 201 125 329 287 22 52 chr5 90031868 90032004 -109598146 + L3 LINE CR1 1326 1457 -120 2021 246 47 39 chr5 90032963 90033630 -109596520 + L1ME1 LINE L1 5490 6161 -5 180 0 0 0 chr5 90034320 90034340 -109595810 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 734 208 143 0 chr5 90034801 90034955 -109595195 + MER45A DNA AcHobo 2 177 -1 506 252 94 0 chr5 90034998 90035125 -109595025 + MIR SINE MIR 123 261 -1 22 0 0 0 chr5 90035260 90035282 -109594868 + AT_rich Low_complexity Low_complexity 1 22 0 684 164 39 0 chr5 90035386 90035514 -109594636 + MER67D LTR ERV1 1 133 -381 2775 143 25 2 chr5 90035514 90035989 -109594161 - L1P4 LINE L1 -396 5770 5285 3156 135 37 0 chr5 90035989 90036523 -109593627 + L1PA16 LINE L1 5612 6166 0 1472 189 92 71 chr5 90036537 90036917 -109593233 + MER67D LTR ERV1 127 514 0 509 294 105 29 chr5 90036942 90037180 -109592970 + MIR SINE MIR 5 260 -2 213 370 68 35 chr5 90037249 90037560 -109592590 + L2 LINE L2 2578 2898 -416 452 303 29 29 chr5 90038127 90038302 -109591848 - MIR SINE MIR -71 191 17 440 154 125 67 chr5 90038741 90038781 -109591369 + MER81 DNA DNA 4 40 -74 1958 173 22 6 chr5 90038781 90039140 -109591010 - MLT1A1 LTR MaLR 0 365 1 440 154 125 67 chr5 90039140 90039203 -109590947 + MER81 DNA DNA 40 113 -1 2051 114 7 23 chr5 90039304 90039603 -109590547 + AluSx SINE Alu 1 294 -18 195 409 26 39 chr5 90039700 90039854 -109590296 + L2 LINE L2 3112 3263 -9 22 56 0 0 chr5 90040319 90040355 -109589795 + AT_rich Low_complexity Low_complexity 1 36 0 39 22 0 0 chr5 90040634 90040680 -109589470 + AT_rich Low_complexity Low_complexity 1 46 0 12699 207 42 18 chr5 90040689 90042339 -109587811 - L1MB1 LINE L1 -65 6339 4730 2207 102 0 16 chr5 90042339 90042643 -109587507 - AluY SINE Alu -12 299 1 12699 207 42 18 chr5 90042643 90043738 -109586412 - L1MB1 LINE L1 -1674 4730 3663 706 174 0 36 chr5 90043738 90043876 -109586274 - FLAM_A SINE Alu 0 133 1 2229 98 0 3 chr5 90043880 90044177 -109585973 - AluSc SINE Alu -13 296 1 12699 207 42 18 chr5 90044177 90045414 -109584736 - L1MB1 LINE L1 -2743 3661 2251 10891 125 13 2 chr5 90045408 90047867 -109582283 - L1PA10 LINE L1 -78 6405 3928 * 7321 41 5 0 chr5 90047868 90049263 -109580887 - L1PA5 LINE L1 -1 6153 4756 12974 47 4 1 chr5 90049264 90050909 -109579241 + L1PA5 LINE L1 3100 4749 -1397 11048 179 25 68 chr5 90050904 90053414 -109576736 - L1PA10 LINE L1 -2523 3938 1323 * 360 0 0 0 chr5 90053414 90053454 -109576696 + (TA)n Simple_repeat Simple_repeat 2 41 0 2412 105 0 0 chr5 90053457 90053770 -109576380 - AluSp SINE Alu 0 313 1 11048 179 25 68 chr5 90053770 90054730 -109575420 - L1PA10 LINE L1 -5140 1321 618 1649 252 8 8 chr5 90054811 90055196 -109574954 - L1PA10 LINE L1 -5490 385 1 525 154 0 38 chr5 90055361 90055472 -109574678 - THE1C LTR MaLR -82 293 197 1948 243 68 15 chr5 90055498 90056083 -109574067 - L1M3d LINE L1 -4600 1291 676 409 282 97 71 chr5 90056248 90056520 -109573630 - L1M3d LINE L1 -5266 625 201 589 301 52 0 chr5 90056776 90056949 -109573201 + MIR SINE MIR 79 260 -2 321 310 63 76 chr5 90056969 90057272 -109572878 - L1ME LINE L1 -315 5806 5508 835 286 48 37 chr5 90057339 90057713 -109572437 + MLT1J1 LTR MaLR 9 386 -60 1310 192 91 88 chr5 90057743 90058132 -109572018 + Charlie4a DNA MER1_type 17 409 -1552 1354 133 24 0 chr5 90058132 90058342 -109571808 + L1PB4 LINE L1 5941 6155 -1 1310 192 91 88 chr5 90058342 90058427 -109571723 + Charlie4a DNA MER1_type 409 492 -16 316 321 40 58 chr5 90059377 90059601 -109570549 + MIR SINE MIR 14 233 -29 711 112 0 0 chr5 90060091 90060198 -109569952 + (TA)n Simple_repeat Simple_repeat 2 108 0 202 267 12 23 chr5 90060831 90060917 -109569233 + (TAA)n Simple_repeat Simple_repeat 1 85 0 2135 129 0 0 chr5 90060956 90061251 -109568899 - AluSx SINE Alu -17 295 1 23 33 0 0 chr5 90061569 90061599 -109568551 + AT_rich Low_complexity Low_complexity 1 30 0 780 319 93 32 chr5 90061844 90062305 -109567845 + L2 LINE L2 2821 3309 -4 27 0 0 0 chr5 90063751 90063778 -109566372 + AT_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr5 90064640 90064674 -109565476 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr5 90064848 90064871 -109565279 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 90065131 90065159 -109564991 + AT_rich Low_complexity Low_complexity 1 28 0 218 282 48 48 chr5 90065913 90066016 -109564134 - MIR3 SINE MIR -14 194 92 186 370 63 8 chr5 90066957 90067084 -109563066 + MIR SINE MIR 8 141 -121 5291 71 10 9 chr5 90067322 90068012 -109562138 - LTR8 LTR ERV1 0 691 1 44165 71 38 15 chr5 90068012 90068671 -109561479 - HUERS-P1 LTR ERV1 0 6263 5620 1971 149 0 26 chr5 90068671 90068979 -109561171 + AluSq SINE Alu 1 300 -13 44165 71 38 15 chr5 90068979 90070836 -109559314 - HUERS-P1 LTR ERV1 -643 5620 3806 2054 149 0 0 chr5 90070836 90071132 -109559018 - AluSg SINE Alu -14 296 1 44165 71 38 15 chr5 90071132 90071956 -109558194 - HUERS-P1 LTR ERV1 -2457 3806 3002 2345 82 0 29 chr5 90071956 90072271 -109557879 - AluY SINE Alu 0 311 6 44165 71 38 15 chr5 90072271 90075051 -109555099 - HUERS-P1 LTR ERV1 -3261 3002 3 5262 79 12 0 chr5 90075053 90075736 -109554414 - LTR8 LTR ERV1 0 691 1 2200 121 3 0 chr5 90077083 90077390 -109552760 - AluSp SINE Alu -5 308 1 332 296 30 15 chr5 90077726 90077925 -109552225 + L1ME3A LINE L1 5737 5938 -232 22 35 0 0 chr5 90078251 90078280 -109551870 + AT_rich Low_complexity Low_complexity 1 29 0 362 288 86 58 chr5 90080181 90080647 -109549503 - L1ME4a LINE L1 -26 6095 5617 341 327 87 33 chr5 90080674 90081025 -109549125 - L1ME4a LINE L1 -743 5403 5175 242 295 85 55 chr5 90081125 90081654 -109548496 - L1ME4a LINE L1 -1094 5052 4508 908 226 55 29 chr5 90081853 90082054 -109548096 - MER33 DNA MER1_type -2262 323 110 2303 92 7 0 chr5 90082054 90082348 -109547802 + AluSc SINE Alu 1 296 -13 908 226 55 29 chr5 90082348 90082456 -109547694 - MER33 DNA MER1_type -2475 110 6 941 289 101 35 chr5 90082975 90083066 -109547084 + L2 LINE L2 2453 2537 -776 2300 95 0 3 chr5 90083066 90083360 -109546790 + AluSq SINE Alu 1 293 -20 941 289 101 35 chr5 90083360 90084025 -109546125 + L2 LINE L2 2537 3311 -2 766 269 63 14 chr5 90084329 90084552 -109545598 + MIR SINE MIR 29 262 0 216 197 15 45 chr5 90087428 90087494 -109542656 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 190 286 133 31 chr5 90090174 90090272 -109539878 + MIR SINE MIR 37 144 -64 220 274 20 0 chr5 90092526 90092577 -109537573 + MIR3 SINE MIR 103 154 -54 1871 153 28 0 chr5 90093353 90093641 -109536509 - AluSx SINE Alu -12 300 5 486 235 221 7 chr5 90094679 90094828 -109535322 - MER5A DNA MER1_type 0 189 9 23 0 0 0 chr5 90096114 90096137 -109534013 + AT_rich Low_complexity Low_complexity 1 23 0 234 325 122 0 chr5 90096535 90096658 -109533492 + MIR3 SINE MIR 44 181 -27 334 295 147 28 chr5 90096827 90097056 -109533094 + MIR SINE MIR 7 259 -3 2219 137 65 87 chr5 90097091 90097564 -109532586 - MER101 LTR ERV1 -1 473 11 187 286 82 0 chr5 90097615 90097664 -109532486 + MIR SINE MIR 38 90 -118 735 178 31 0 chr5 90097703 90097832 -109532318 - FLAM_A SINE Alu 0 133 1 21 57 0 0 chr5 90098126 90098161 -109531989 + AT_rich Low_complexity Low_complexity 1 35 0 248 238 16 5 chr5 90098959 90099033 -109531117 - MER102b DNA MER1_type -6 335 276 182 250 0 15 chr5 90099538 90099606 -109530544 + GA-rich Low_complexity Low_complexity 2 68 0 180 111 0 0 chr5 90099965 90099992 -109530158 + (T)n Simple_repeat Simple_repeat 1 27 0 190 286 54 88 chr5 90100724 90100871 -109529279 - L2 LINE L2 -1330 1984 1843 198 88 0 88 chr5 90101064 90101098 -109529052 + L2 LINE L2 3227 3257 -15 205 216 20 20 chr5 90101204 90101255 -109528895 + MIR SINE MIR 110 160 -102 3106 256 91 35 chr5 90101339 90102683 -109527467 - L2 LINE L2 -3 3310 1894 1322 292 36 50 chr5 90102687 90103183 -109526967 - L2 LINE L2 -2809 505 17 200 200 125 0 chr5 90103972 90104012 -109526138 - L2 LINE L2 -5 3308 3264 799 298 16 8 chr5 90104314 90104559 -109525591 + MIR SINE MIR 16 262 0 187 338 59 91 chr5 90104620 90104839 -109525311 - L2 LINE L2 -93 3179 2968 612 294 91 17 chr5 90105875 90106106 -109524044 + MIR SINE MIR 15 262 0 486 212 73 60 chr5 90106627 90106778 -109523372 + MER5A DNA MER1_type 37 189 0 235 250 83 0 chr5 90108568 90108628 -109521522 + MIR SINE MIR 186 250 -12 506 295 191 9 chr5 90108876 90109086 -109521064 + MIR SINE MIR 8 255 -7 21 0 0 0 chr5 90109520 90109541 -109520609 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr5 90110006 90110045 -109520105 + AT_rich Low_complexity Low_complexity 1 39 0 5102 153 47 27 chr5 90110045 90110169 -109519981 - L1MA7 LINE L1 -5 6286 6166 279 0 0 0 chr5 90110169 90110200 -109519950 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1919 91 24 28 chr5 90110200 90110487 -109519663 - AluSq SINE Alu -27 286 1 5102 153 47 27 chr5 90110487 90111516 -109518634 - L1MA7 LINE L1 -124 6167 5111 1386 133 40 0 chr5 90111542 90111791 -109518359 + L1MA2 LINE L1 6046 6304 0 608 118 105 46 chr5 90111822 90111975 -109518175 + L1MA8 LINE L1 6119 6280 -11 3001 189 33 3 chr5 90111994 90112606 -109517544 - L1MA7 LINE L1 -1043 5103 4474 916 265 4 17 chr5 90113077 90113311 -109516839 - MIR SINE MIR -24 238 8 2552 53 3 0 chr5 90115236 90115559 -109514591 - L1PA8 LINE L1 -2 6170 5847 1012 296 79 25 chr5 90116507 90116986 -109513164 + L2 LINE L2 2809 3313 0 277 349 47 47 chr5 90117019 90117251 -109512899 + MIR SINE MIR 8 239 -23 22 0 0 0 chr5 90117289 90117311 -109512839 + AT_rich Low_complexity Low_complexity 1 22 0 1748 151 19 32 chr5 90118581 90118893 -109511257 - MER1B DNA MER1_type 0 339 32 327 49 0 0 chr5 90118922 90118963 -109511187 + (TG)n Simple_repeat Simple_repeat 2 42 0 499 361 24 5 chr5 90119103 90119311 -109510839 - MIR SINE MIR -50 212 1 32 0 0 0 chr5 90120966 90120998 -109509152 + AT_rich Low_complexity Low_complexity 1 32 0 230 330 37 28 chr5 90122091 90122200 -109507950 + L2 LINE L2 3192 3301 -12 26 30 0 0 chr5 90123384 90123417 -109506733 + AT_rich Low_complexity Low_complexity 1 33 0 26 0 0 0 chr5 90123521 90123547 -109506603 + AT_rich Low_complexity Low_complexity 1 26 0 219 244 39 77 chr5 90125156 90125234 -109504916 - MIR SINE MIR -64 198 124 26 0 0 0 chr5 90125383 90125409 -109504741 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr5 90126907 90126931 -109503219 + AT_rich Low_complexity Low_complexity 1 24 0 227 356 10 10 chr5 90127439 90127540 -109502610 - MIR SINE MIR -1 261 161 294 208 0 0 chr5 90127567 90127615 -109502535 - MIR SINE MIR -179 83 36 238 331 38 45 chr5 90127905 90128038 -109502112 + L2 LINE L2 3182 3313 0 665 273 68 89 chr5 90129072 90129398 -109500752 - MER102b DNA MER1_type -12 329 11 191 61 30 0 chr5 90129845 90129878 -109500272 + (TTTAA)n Simple_repeat Simple_repeat 3 36 0 2025 118 3 3 chr5 90129878 90130166 -109499984 - AluSg SINE Alu -22 288 1 399 290 94 0 chr5 90131048 90131186 -109498964 + MIR SINE MIR 34 184 -78 523 0 30 0 chr5 90132053 90132120 -109498030 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 22 80 0 0 chr5 90133076 90133126 -109497024 + AT_rich Low_complexity Low_complexity 1 50 0 21 57 0 0 chr5 90133612 90133647 -109496503 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 90137048 90137076 -109493074 + AT_rich Low_complexity Low_complexity 1 28 0 221 156 44 0 chr5 90138358 90138403 -109491747 + A-rich Low_complexity Low_complexity 5 51 0 334 263 11 0 chr5 90138583 90138678 -109491472 + GA-rich Low_complexity Low_complexity 4 99 0 28 48 0 0 chr5 90140715 90140757 -109489393 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr5 90142420 90142445 -109487705 + AT_rich Low_complexity Low_complexity 1 25 0 267 206 11 22 chr5 90142685 90142777 -109487373 + GA-rich Low_complexity Low_complexity 2 92 0 318 50 0 0 chr5 90142839 90142879 -109487271 + (A)n Simple_repeat Simple_repeat 1 40 0 31 26 0 0 chr5 90143416 90143454 -109486696 + AT_rich Low_complexity Low_complexity 1 38 0 29 47 0 0 chr5 90143573 90143616 -109486534 + AT_rich Low_complexity Low_complexity 1 43 0 23 54 0 0 chr5 90143649 90143686 -109486464 + AT_rich Low_complexity Low_complexity 1 37 0 863 300 93 48 chr5 90145868 90146342 -109483808 + MARNA DNA Mariner 79 573 -13 201 176 0 0 chr5 90150839 90150873 -109479277 + GA-rich Low_complexity Low_complexity 3 36 0 1704 166 0 40 chr5 90151836 90152137 -109478013 - AluJo SINE Alu -21 291 3 1569 193 10 10 chr5 90152762 90152897 -109477253 + AluJb SINE Alu 1 135 -177 2211 113 3 7 chr5 90152897 90153207 -109476943 + AluSp SINE Alu 1 309 -4 1569 193 10 10 chr5 90153207 90153372 -109476778 + AluJb SINE Alu 134 301 -11 535 237 195 19 chr5 90153467 90153682 -109476468 + MIR SINE MIR 10 262 0 869 138 15 8 chr5 90154843 90154973 -109475177 + FLAM_C SINE Alu 3 133 -10 243 242 0 32 chr5 90156111 90156173 -109473977 + (CATATA)n Simple_repeat Simple_repeat 4 63 0 2084 133 7 0 chr5 90156352 90156653 -109473497 + AluSp SINE Alu 1 303 -10 330 254 87 32 chr5 90158375 90158501 -109471649 - MIR SINE MIR -10 252 120 2010 150 0 10 chr5 90158589 90158903 -109471247 - AluSx SINE Alu 0 312 2 982 281 51 26 chr5 90159199 90159551 -109470599 - L1MEc LINE L1 -5725 671 311 2210 264 56 32 chr5 90159551 90159582 -109470568 + L1MC4 LINE L1 737 766 -5630 795 139 0 0 chr5 90159582 90159728 -109470422 + FLAM_C SINE Alu 2 147 0 2210 264 56 32 chr5 90159728 90160674 -109469476 + L1MC4 LINE L1 766 1740 -4656 4982 219 76 92 chr5 90160686 90163235 -109466915 + L1MC4 LINE L1 3226 5813 -420 856 140 0 0 chr5 90163235 90163371 -109466779 - L1PB1 LINE L1 0 6151 6016 2059 186 9 9 chr5 90163379 90163809 -109466341 - L1MA4 LINE L1 -4 6296 5867 4982 219 76 92 chr5 90163809 90164275 -109465875 + L1MC4 LINE L1 5820 6233 0 548 174 0 70 chr5 90164974 90165089 -109465061 + AluSq/x SINE Alu 1 107 -206 482 306 61 4 chr5 90165583 90165828 -109464322 - L1ME4a LINE L1 -279 5842 5584 24 32 0 0 chr5 90166061 90166092 -109464058 + AT_rich Low_complexity Low_complexity 1 31 0 343 258 86 7 chr5 90166186 90166337 -109463813 - L1ME1 LINE L1 -8 6158 5996 * 1373 208 72 41 chr5 90166330 90166791 -109463359 - L1ME1 LINE L1 -506 5658 5186 753 258 79 7 chr5 90166896 90167187 -109462963 - L1ME1 LINE L1 -968 5178 4867 4638 251 40 24 chr5 90167200 90169205 -109460945 + L1PA13 LINE L1 2 2466 -4331 251 200 275 17 chr5 90169288 90169408 -109460742 - L1PA15-16 LINE L1 -3929 2920 2770 11931 228 14 7 chr5 90169408 90172269 -109457881 - L1PA15 LINE L1 -1070 5076 2198 5298 151 35 20 chr5 90172270 90173365 -109456785 + L1PA15 LINE L1 5058 6165 0 23 0 0 0 chr5 90173367 90173390 -109456760 + AT_rich Low_complexity Low_complexity 1 23 0 1384 215 83 8 chr5 90173390 90173776 -109456374 - L1M4 LINE L1 -1271 4875 4461 376 301 129 5 chr5 90173972 90174181 -109455969 - MARNA DNA Mariner -111 475 241 180 400 0 13 chr5 90174345 90174420 -109455730 + MIR SINE MIR 45 118 -90 213 324 14 54 chr5 90174447 90174521 -109455629 - MER5B DNA MER1_type -60 118 48 222 347 21 42 chr5 90174536 90174631 -109455519 + L3b LINE CR1 1488 1580 -3 23 33 0 0 chr5 90175522 90175552 -109454598 + AT_rich Low_complexity Low_complexity 1 30 0 986 157 132 15 chr5 90176314 90176511 -109453639 - AluJo SINE Alu -11 301 82 25 0 0 0 chr5 90178078 90178103 -109452047 + AT_rich Low_complexity Low_complexity 1 25 0 204 40 0 0 chr5 90181540 90181565 -109448585 + (CACG)n Simple_repeat Simple_repeat 2 26 0 2062 138 76 15 chr5 90184258 90184599 -109445551 - THE1B LTR MaLR -2 362 1 10467 107 38 3 chr5 90184599 90186126 -109444024 - THE1B-int LTR MaLR 0 1580 1 2133 128 76 15 chr5 90186126 90186469 -109443681 - THE1B LTR MaLR 0 364 1 427 250 173 6 chr5 90186651 90186819 -109443331 - L2 LINE L2 -773 2541 2346 199 302 48 0 chr5 90186942 90187005 -109443145 - MIR SINE MIR 0 262 197 264 294 0 0 chr5 90187024 90187092 -109443058 + MLT1J LTR MaLR 131 198 -313 27 29 0 0 chr5 90187416 90187450 -109442700 + AT_rich Low_complexity Low_complexity 1 34 0 727 291 85 0 chr5 90189172 90189395 -109440755 + MIR SINE MIR 19 260 -2 4024 154 35 17 chr5 90189487 90189871 -109440279 - L1MA4A LINE L1 0 6303 5927 2493 129 3 3 chr5 90189871 90190234 -109439916 - THE1B LTR MaLR -1 363 1 4024 154 35 17 chr5 90190234 90190623 -109439527 - L1MA4A LINE L1 -376 5927 5516 278 93 0 0 chr5 90190623 90190661 -109439489 + L1P LINE L1 4182 4220 -1922 321 102 0 0 chr5 90190661 90190710 -109439440 + L1PA8 LINE L1 6120 6168 -4 11557 226 49 40 chr5 90190727 90195844 -109434306 - L1 LINE L1 -1520 5328 3 477 293 110 57 chr5 90196963 90197280 -109432870 + LTR16C LTR ERVL 158 491 0 279 322 110 27 chr5 90197346 90197492 -109432658 + MIR3 SINE MIR 42 199 -9 282 234 62 0 chr5 90201605 90201669 -109428481 + MIR SINE MIR 122 189 -73 323 286 52 37 chr5 90201850 90202078 -109428072 + MLT1K LTR MaLR 257 557 -31 22 0 0 0 chr5 90202871 90202893 -109427257 + AT_rich Low_complexity Low_complexity 1 22 0 2406 74 0 10 chr5 90205663 90205973 -109424177 - AluSg1 SINE Alu -2 307 1 203 269 96 0 chr5 90205998 90206050 -109424100 - MIR SINE MIR -110 152 96 632 204 79 17 chr5 90207021 90207212 -109422938 + MIR SINE MIR 53 262 0 210 316 51 8 chr5 90207227 90207344 -109422806 + MIR SINE MIR 87 208 -54 294 351 29 17 chr5 90207417 90207591 -109422559 + L2 LINE L2 734 909 -2405 665 34 22 11 chr5 90207646 90207735 -109422415 - L1PA7 LINE L1 0 6154 6065 754 269 107 66 chr5 90207824 90208423 -109421727 + L1MB7 LINE L1 269 1224 -5635 9254 216 77 29 chr5 90208467 90210140 -109420010 + L1MB7 LINE L1 3049 4640 -2355 3176 38 15 0 chr5 90210140 90210531 -109419619 - L1PA7 LINE L1 0 6154 5758 9254 216 77 29 chr5 90210531 90210823 -109419327 + L1MB7 LINE L1 4640 4916 -2079 2575 51 0 6 chr5 90210823 90211136 -109419014 + AluY SINE Alu 1 311 0 9254 216 77 29 chr5 90211136 90212525 -109417625 + L1MB7 LINE L1 4916 6569 -426 1924 190 23 19 chr5 90212742 90213173 -109416977 + L1MB7 LINE L1 6563 6995 0 1002 199 93 9 chr5 90213371 90213587 -109416563 - MLT1E2 LTR MaLR -8 497 264 5477 143 16 8 chr5 90213594 90214670 -109415480 - L1PB3 LINE L1 -3 6151 5068 4512 194 7 6 chr5 90214672 90215640 -109414510 + L1PB3 LINE L1 4091 5059 -1087 1026 228 92 43 chr5 90215653 90215934 -109414216 - MLT1E2 LTR MaLR -331 295 1 2078 94 0 35 chr5 90216114 90216402 -109413748 + AluSq SINE Alu 27 304 -9 1649 149 195 11 chr5 90216474 90216639 -109413511 + MSTA LTR MaLR 17 150 -278 204 40 0 0 chr5 90216639 90216664 -109413486 + (TC)n Simple_repeat Simple_repeat 1 25 0 1649 149 195 11 chr5 90216664 90216846 -109413304 + MSTA LTR MaLR 150 428 0 317 292 25 17 chr5 90218027 90218147 -109412003 - MER5B DNA MER1_type -56 122 2 1194 46 7 0 chr5 90218207 90218359 -109411791 - AluY SINE Alu -2 309 157 221 309 89 8 chr5 90220156 90220279 -109409871 - L2 LINE L2 -223 3049 2917 837 273 19 5 chr5 90220505 90220721 -109409429 - MIR SINE MIR -25 237 19 181 222 56 42 chr5 90220757 90220829 -109409321 - L2 LINE L2 -508 2806 2734 23 33 0 0 chr5 90221831 90221861 -109408289 + AT_rich Low_complexity Low_complexity 1 30 0 2167 124 7 0 chr5 90224549 90224848 -109405302 + AluSx SINE Alu 1 301 -11 262 259 134 18 chr5 90225204 90225316 -109404834 - MIR SINE MIR -88 174 50 29 47 0 0 chr5 90228190 90228233 -109401917 + AT_rich Low_complexity Low_complexity 1 43 0 423 262 60 33 chr5 90229651 90229834 -109400316 + L2 LINE L2 3105 3292 -21 773 229 39 0 chr5 90230354 90230507 -109399643 - MER63A DNA MER1_type -2 208 50 1755 180 38 32 chr5 90231184 90231556 -109398594 - MLT1A2 LTR MaLR 0 374 1 318 308 35 14 chr5 90232609 90232752 -109397398 - MER117 DNA MER1_type -50 147 2 477 380 60 22 chr5 90233170 90233538 -109396612 + L1MEd LINE L1 446 827 -5292 702 304 30 21 chr5 90233565 90233802 -109396348 - MIR SINE MIR -21 241 3 922 207 122 30 chr5 90233821 90233973 -109396177 - MIR SINE MIR -3 259 76 2022 191 8 14 chr5 90233973 90234340 -109395810 - MLT1A1 LTR MaLR 0 365 1 922 207 122 30 chr5 90234340 90234424 -109395726 - MIR SINE MIR -186 76 1 377 297 34 54 chr5 90234434 90234730 -109395420 + L1MEd LINE L1 2240 2529 -3600 271 175 0 88 chr5 90236256 90236313 -109393837 - L1M4 LINE L1 -2593 3553 3502 17240 59 6 2 chr5 90236314 90239342 -109390808 - L1PA5 LINE L1 -2 6152 3118 450 0 0 0 chr5 90240463 90240513 -109389637 + (TAA)n Simple_repeat Simple_repeat 2 51 0 694 209 0 0 chr5 90241981 90242110 -109388040 - FLAM_C SINE Alu -9 134 6 725 195 37 12 chr5 90242645 90242809 -109387341 + L1MA7 LINE L1 5877 6044 -247 356 248 0 18 chr5 90243313 90243422 -109386728 + L1MA9 LINE L1 6160 6266 -46 181 314 20 0 chr5 90243828 90243879 -109386271 + L3 LINE CR1 1491 1542 -35 2732 243 71 82 chr5 90243985 90244585 -109385565 + L1MC4 LINE L1 6725 7330 -665 318 85 0 0 chr5 90244585 90244632 -109385518 - MADE1 DNA Mariner -33 47 1 2732 243 71 82 chr5 90244632 90245328 -109384822 + L1MC4 LINE L1 7330 7995 0 270 220 57 99 chr5 90245442 90245583 -109384567 + MER103 DNA DNA 17 151 -15 385 316 29 47 chr5 90245856 90245899 -109384251 - MIR SINE MIR -94 168 126 1414 77 5 0 chr5 90245899 90246095 -109384055 + L1MA1 LINE L1 6106 6302 0 385 316 29 47 chr5 90246095 90246222 -109383928 - MIR SINE MIR -136 126 1 205 175 0 25 chr5 90247626 90247666 -109382484 + CT-rich Low_complexity Low_complexity 5 43 0 314 205 0 41 chr5 90247723 90247942 -109382208 + AluJo SINE Alu 2 302 0 230 183 28 0 chr5 90248356 90248427 -109381723 - HAL1b LINE L1 -6 1342 1270 332 331 82 51 chr5 90248451 90248708 -109381442 - L1ME4a LINE L1 -158 5963 5699 3484 163 24 15 chr5 90248733 90249390 -109380760 + L1MB3 LINE L1 5520 6182 -1 269 213 0 0 chr5 90249413 90249474 -109380676 - L1P LINE L1 -743 5411 5351 230 307 76 48 chr5 90251139 90251390 -109378760 - L1ME LINE L1 -247 5874 5617 196 148 0 37 chr5 90251453 90251507 -109378643 + (TATG)n Simple_repeat Simple_repeat 3 54 0 33 56 0 0 chr5 90251804 90251858 -109378292 + AT_rich Low_complexity Low_complexity 1 54 0 282 270 6 50 chr5 90252279 90252438 -109377712 + GA-rich Low_complexity Low_complexity 3 154 0 295 356 68 14 chr5 90254225 90254371 -109375779 - MIR3 SINE MIR -51 157 4 334 280 104 48 chr5 90254590 90254711 -109375439 + MIR SINE MIR 26 139 -123 2179 107 3 0 chr5 90254711 90255001 -109375149 + AluSx SINE Alu 4 294 -18 334 280 104 48 chr5 90255001 90255115 -109375035 + MIR SINE MIR 139 261 -1 4462 233 26 8 chr5 90258944 90260362 -109369788 + L1PA13 LINE L1 1319 2781 -4016 709 200 0 14 chr5 90260362 90260502 -109369648 + AluSq/x SINE Alu 1 138 -175 6138 171 33 40 chr5 90260729 90262015 -109368135 + L1P LINE L1 11 1287 -4859 1758 149 16 7 chr5 90262117 90262426 -109367724 + MSTA-int LTR MaLR 1340 1651 0 2121 141 96 15 chr5 90262426 90262822 -109367328 + MSTA LTR MaLR 1 428 0 7378 157 15 131 chr5 90262822 90264569 -109365581 - L1PA15-16 LINE L1 -5019 1830 286 10997 99 4 4 chr5 90264671 90266168 -109363982 - THE1B-int LTR MaLR -83 1497 1 2164 116 51 25 chr5 90266168 90266523 -109363627 - THE1B LTR MaLR 0 364 1 317 254 103 27 chr5 90266532 90266756 -109363394 - L1M4 LINE L1 -1750 4396 4156 482 138 0 12 chr5 90266898 90266978 -109363172 - L1PA16 LINE L1 -71 6095 6017 * 7340 196 25 10 chr5 90266966 90269477 -109360673 - L1PA15-16 LINE L1 -2457 4392 1827 2088 143 114 5 chr5 90269477 90269863 -109360287 + MSTA LTR MaLR 1 428 0 6324 226 72 47 chr5 90269865 90271403 -109358747 + MSTA-int LTR MaLR 3 1579 -1 1740 114 129 33 chr5 90271404 90271736 -109358414 + THE1B LTR MaLR 1 364 0 1765 272 114 18 chr5 90271739 90273255 -109356895 + L1ME3 LINE L1 4420 6091 -71 1099 294 62 65 chr5 90273255 90274046 -109356104 + L2 LINE L2 2536 3313 0 329 287 30 79 chr5 90274027 90274191 -109355959 - L2 LINE L2 0 3313 3158 * 25 31 0 0 chr5 90274408 90274440 -109355710 + AT_rich Low_complexity Low_complexity 1 32 0 265 253 200 0 chr5 90275079 90275174 -109354976 - MIR SINE MIR -40 222 109 360 297 65 22 chr5 90275241 90275379 -109354771 + MIR3 SINE MIR 3 146 -62 245 229 0 14 chr5 90275507 90275577 -109354573 + CT-rich Low_complexity Low_complexity 4 72 0 224 209 0 0 chr5 90275638 90275681 -109354469 + T-rich Low_complexity Low_complexity 4 46 0 21 0 0 0 chr5 90276022 90276043 -109354107 + AT_rich Low_complexity Low_complexity 1 21 0 2384 102 6 6 chr5 90276043 90276397 -109353753 - L1PB1 LINE L1 -1 6150 5797 378 85 0 0 chr5 90276397 90276456 -109353694 + (TA)n Simple_repeat Simple_repeat 2 60 0 367 258 67 17 chr5 90277721 90277899 -109352251 + L1MEd LINE L1 1 187 -5932 474 268 66 15 chr5 90278430 90278675 -109351475 + L1ME LINE L1 5255 5513 -651 798 196 0 0 chr5 90279077 90279215 -109350935 - FLAM_C SINE Alu -5 138 1 1053 279 78 14 chr5 90281765 90282277 -109347873 + L1M4 LINE L1 3577 4121 -2025 1246 136 123 47 chr5 90282302 90282538 -109347612 + L1PA16 LINE L1 2 255 -6594 12275 210 29 9 chr5 90282638 90284329 -109345821 + L1PA16 LINE L1 2854 4509 -2360 2111 163 80 8 chr5 90284329 90284727 -109345423 + MSTA LTR MaLR 1 427 -1 12275 210 29 9 chr5 90284727 90286966 -109343184 + L1PA16 LINE L1 4509 6869 0 294 29 0 0 chr5 90287000 90287035 -109343115 + (A)n Simple_repeat Simple_repeat 1 35 0 455 261 119 84 chr5 90287222 90287601 -109342549 + MLT1J1 LTR MaLR 51 442 -4 22 0 0 0 chr5 90288342 90288364 -109341786 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 90289707 90289729 -109340421 + AT_rich Low_complexity Low_complexity 1 22 0 2472 63 0 0 chr5 90290987 90291290 -109338860 - AluY SINE Alu -8 303 1 598 41 0 93 chr5 90291716 90291843 -109338307 - L1PA2 LINE L1 0 6155 6068 567 234 143 7 chr5 90292478 90292632 -109337518 - MER69A DNA AcHobo 0 177 3 363 240 42 0 chr5 90294737 90294833 -109335317 - MIR SINE MIR -32 230 131 1741 135 5 137 chr5 90295137 90295499 -109334651 - MLT1B LTR MaLR -2 388 92 1884 151 13 10 chr5 90295499 90295810 -109334340 - AluJb SINE Alu 0 312 1 1741 135 5 137 chr5 90295810 90295885 -109334265 - MLT1B LTR MaLR -298 92 9 594 252 0 0 chr5 90298112 90298235 -109331915 + Charlie2b DNA MER1_type 28 150 -2632 223 259 0 0 chr5 90298309 90298363 -109331787 + (CATA)n Simple_repeat Simple_repeat 3 56 0 898 309 68 28 chr5 90298376 90298803 -109331347 + Charlie2b DNA MER1_type 227 670 -2112 1948 226 83 24 chr5 90298861 90299836 -109330314 + Charlie2a DNA MER1_type 1474 2604 -258 972 191 38 120 chr5 90299854 90300221 -109329929 - L1ME3A LINE L1 -6 6164 5828 306 250 20 0 chr5 90300240 90300340 -109329810 + Charlie2a DNA MER1_type 2694 2795 -67 209 280 0 0 chr5 90300348 90300398 -109329752 + MIR SINE MIR 100 149 -113 1964 105 10 0 chr5 90300411 90300784 -109329366 - L1P5 LINE L1 -614 5537 5161 1375 81 10 5 chr5 90300785 90300983 -109329167 + L1P5 LINE L1 5561 5759 -392 2084 110 17 0 chr5 90301949 90302248 -109327902 - AluSq SINE Alu -9 304 1 422 247 118 56 chr5 90302750 90302928 -109327222 - L2 LINE L2 0 3313 3125 287 239 0 0 chr5 90303120 90303187 -109326963 - MER116 DNA Mariner -13 67 1 287 333 56 80 chr5 90303187 90303526 -109326624 - L2 LINE L2 -549 2765 2435 2570 97 11 3 chr5 90304320 90304681 -109325469 - THE1B LTR MaLR 0 364 1 28 0 0 0 chr5 90305441 90305469 -109324681 + AT_rich Low_complexity Low_complexity 1 28 0 614 273 156 72 chr5 90305479 90306227 -109323923 - L1ME4a LINE L1 -1 6120 5310 582 299 76 47 chr5 90307686 90307880 -109322270 - MLT1K LTR MaLR -15 573 365 1276 269 115 7 chr5 90307880 90308297 -109321853 - LTR40b LTR ERVL 0 462 1 582 299 76 47 chr5 90308297 90308403 -109321747 - MLT1K LTR MaLR -223 365 264 312 355 9 0 chr5 90309087 90309197 -109320953 + MIR SINE MIR 31 141 -67 1353 243 75 64 chr5 90311116 90311585 -109318565 + L1M2b LINE L1 7 480 -6729 * 3751 215 29 8 chr5 90311582 90313016 -109317134 + L1M2b LINE L1 2401 3866 -3342 449 104 8 0 chr5 90313013 90313087 -109317063 - L1MC/D LINE L1 -824 5479 5417 * 303 286 7 34 chr5 90313091 90313238 -109316912 - MSTB1-int LTR MaLR -1284 367 225 1414 208 45 22 chr5 90313750 90314106 -109316044 - MSTB1-int LTR MaLR -1285 366 3 2334 158 18 32 chr5 90314108 90314546 -109315604 - MSTB1 LTR MaLR 0 432 1 509 128 0 11 chr5 90314546 90314640 -109315510 + L1MA5 LINE L1 6205 6297 -3 29 47 0 0 chr5 90314640 90314683 -109315467 + AT_rich Low_complexity Low_complexity 1 43 0 2538 253 57 48 chr5 90314912 90317172 -109312978 + L1M3e LINE L1 1 2962 -4144 2010 144 0 7 chr5 90317178 90317484 -109312666 + AluSc SINE Alu 1 304 -5 22 99 0 0 chr5 90317488 90317559 -109312591 + AT_rich Low_complexity Low_complexity 1 71 0 28665 78 9 3 chr5 90318226 90322986 -109307164 - L1PA6 LINE L1 -3 6151 1362 529 168 9 9 chr5 90323109 90323222 -109306928 + CT-rich Low_complexity Low_complexity 1 113 0 1600 158 47 20 chr5 90323222 90323520 -109306630 - AluJo SINE Alu -6 306 1 442 290 131 0 chr5 90325182 90325358 -109304792 - MIR SINE MIR 0 262 64 411 349 23 0 chr5 90326628 90326760 -109303390 - L2 LINE L2 -1 3271 3137 233 246 0 31 chr5 90326832 90326897 -109303253 + GA-rich Low_complexity Low_complexity 4 66 0 210 184 163 0 chr5 90332276 90332325 -109297825 - L2 LINE L2 0 3272 3216 22 0 0 0 chr5 90333054 90333076 -109297074 + AT_rich Low_complexity Low_complexity 1 22 0 240 345 45 9 chr5 90333722 90333832 -109296318 - L3b LINE CR1 -355 1228 1115 206 368 125 0 chr5 90334218 90334354 -109295796 + MIR SINE MIR 64 216 -46 26 30 0 0 chr5 90334376 90334409 -109295741 + AT_rich Low_complexity Low_complexity 1 33 0 23 68 0 0 chr5 90334917 90334961 -109295189 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr5 90335230 90335252 -109294898 + AT_rich Low_complexity Low_complexity 1 22 0 1033 202 0 0 chr5 90338531 90338704 -109291446 - FAM SINE Alu -2 173 1 234 256 78 128 chr5 90338770 90338950 -109291200 + MER5B DNA MER1_type 2 172 -6 192 382 36 0 chr5 90339809 90339919 -109290231 - L3 LINE CR1 -336 1241 1128 206 316 63 0 chr5 90340590 90340669 -109289481 - MIR SINE MIR -63 199 116 2211 107 24 0 chr5 90341239 90341537 -109288613 - AluSx SINE Alu -7 305 1 242 56 28 0 chr5 90341778 90341814 -109288336 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 989 193 0 27 chr5 90393097 90393284 -109236866 - AluJo SINE Alu -126 186 5 2520 79 0 0 chr5 90393700 90394005 -109236145 - AluSg SINE Alu -1 309 5 258 150 17 17 chr5 90394011 90394071 -109236079 + L1MB8 LINE L1 6049 6108 -70 254 134 213 0 chr5 90394118 90394183 -109235967 + L1MB8 LINE L1 6101 6179 -5 1420 143 54 36 chr5 90394294 90394573 -109235577 - L1M2 LINE L1 -692 5608 5325 1229 142 10 20 chr5 90394573 90394724 -109235426 - AluJb SINE Alu -26 286 136 2167 108 3 7 chr5 90394724 90395030 -109235120 - AluSq SINE Alu -8 305 1 1229 142 10 20 chr5 90395030 90395082 -109235068 - AluJb SINE Alu -176 136 85 1182 133 38 5 chr5 90395084 90395295 -109234855 - L1M2 LINE L1 -817 5329 5112 21 0 0 0 chr5 90396437 90396458 -109233692 + GC_rich Low_complexity Low_complexity 1 21 0 287 307 73 40 chr5 90397917 90398067 -109232083 - MARNA DNA Mariner -410 176 22 1863 121 0 29 chr5 90398131 90398438 -109231712 + AluSq SINE Alu 1 298 -15 1870 163 17 0 chr5 90398746 90399040 -109231110 - AluJb SINE Alu -13 299 1 275 240 193 20 chr5 90399076 90399226 -109230924 + LTR33 LTR ERVL 342 517 -4 2286 107 3 0 chr5 90399464 90399763 -109230387 + AluSx SINE Alu 1 300 -12 2021 128 7 3 chr5 90399802 90400092 -109230058 + AluSx SINE Alu 1 291 -21 1477 111 14 5 chr5 90400099 90400306 -109229844 + AluSq SINE Alu 2 210 -103 1210 68 0 0 chr5 90400407 90400553 -109229597 + AluY SINE Alu 156 301 -10 913 200 0 22 chr5 90400556 90400736 -109229414 + FRAM SINE Alu 1 40 0 864 21 0 0 chr5 90401518 90401612 -109228538 + L1PA2 LINE L1 6054 6147 -8 27 0 0 0 chr5 90401612 90401639 -109228511 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 90401787 90401808 -109228342 + AT_rich Low_complexity Low_complexity 1 21 0 2293 56 13 46 chr5 90401948 90402254 -109227896 - AluY SINE Alu -15 296 1 548 307 0 0 chr5 90402297 90402434 -109227716 + MIR SINE MIR 56 192 -70 23 87 0 0 chr5 90402445 90402491 -109227659 + AT_rich Low_complexity Low_complexity 1 46 0 408 20 0 0 chr5 90402533 90402582 -109227568 + (TTA)n Simple_repeat Simple_repeat 1 49 0 1326 85 11 6 chr5 90402582 90402758 -109227392 - AluSg/x SINE Alu -32 280 104 364 163 3 0 chr5 90402758 90402828 -109227322 - Alu SINE Alu -252 56 2 834 122 8 0 chr5 90402842 90402965 -109227185 - AluSg/x SINE Alu -17 293 170 708 214 181 33 chr5 90403068 90403505 -109226645 + Charlie2 DNA MER1_type 2034 2604 -258 1011 191 38 120 chr5 90403523 90403890 -109226260 - L1ME3A LINE L1 -6 6164 5828 324 198 27 45 chr5 90403892 90404003 -109226147 + Charlie2 DNA MER1_type 2681 2789 -73 201 280 0 0 chr5 90404017 90404067 -109226083 + MIR SINE MIR 100 149 -113 2023 105 10 0 chr5 90404080 90404453 -109225697 - L1P5 LINE L1 -614 5537 5161 1451 80 5 5 chr5 90404454 90404653 -109225497 + L1P5 LINE L1 5561 5759 -392 303 28 0 0 chr5 90404653 90404689 -109225461 + (TA)n Simple_repeat Simple_repeat 2 37 0 9164 57 4 0 chr5 90404834 90406000 -109224150 + L1PA5 LINE L1 2390 3560 -2586 13179 39 0 2 chr5 90406000 90408276 -109221874 + L1PA5 LINE L1 3876 6151 -3 950 333 25 33 chr5 90408277 90408676 -109221474 + HERV16 LTR ERVL 2769 3202 -1900 317 215 0 15 chr5 90409021 90409086 -109221064 - MIR3 SINE MIR -34 174 111 950 257 90 53 chr5 90409558 90410158 -109219992 - L1MEd LINE L1 -4961 1158 537 256 382 24 34 chr5 90410250 90410543 -109219607 - L1MEd LINE L1 -5731 388 99 236 30 30 0 chr5 90410551 90410584 -109219566 + (TTG)n Simple_repeat Simple_repeat 3 36 0 674 254 103 0 chr5 90410717 90410882 -109219268 + MIR SINE MIR 60 241 -21 22 35 0 0 chr5 90410889 90410918 -109219232 + AT_rich Low_complexity Low_complexity 1 29 0 453 319 0 14 chr5 90412534 90412675 -109217475 + L3 LINE CR1 1317 1455 -122 2157 100 6 6 chr5 90413059 90413378 -109216772 + L1PB1 LINE L1 5832 6150 -1 21 0 0 0 chr5 90413378 90413399 -109216751 + AT_rich Low_complexity Low_complexity 1 21 0 224 209 0 0 chr5 90413740 90413783 -109216367 + A-rich Low_complexity Low_complexity 4 46 0 215 226 0 16 chr5 90413852 90413914 -109216236 + GA-rich Low_complexity Low_complexity 4 64 0 360 297 65 22 chr5 90414042 90414180 -109215970 - MIR3 SINE MIR -62 146 3 265 253 200 0 chr5 90414247 90414342 -109215808 + MIR SINE MIR 109 222 -40 25 31 0 0 chr5 90414981 90415013 -109215137 + AT_rich Low_complexity Low_complexity 1 32 0 329 287 30 79 chr5 90415230 90415394 -109214756 + L2 LINE L2 3158 3313 0 * 1099 294 62 65 chr5 90415375 90416166 -109213984 - L2 LINE L2 0 3313 2536 1855 271 116 16 chr5 90416173 90417680 -109212470 - L1ME3A LINE L1 -83 6070 4403 1819 114 123 33 chr5 90417683 90418017 -109212133 - THE1B LTR MaLR 0 364 1 7566 107 6 4 chr5 90418018 90419079 -109211071 - THE1B-int LTR MaLR -1 1579 517 362 280 80 0 chr5 90419183 90419333 -109210817 - L1M4 LINE L1 -816 5330 5169 367 258 67 17 chr5 90419782 90419960 -109210190 - L1ME3A LINE L1 -5932 187 1 248 333 57 0 chr5 90420595 90420700 -109209450 - LTR16A LTR ERVL -100 350 240 238 220 17 17 chr5 90420825 90420884 -109209266 - LTR16A1 LTR ERVL -356 101 43 953 340 18 9 chr5 90421285 90421626 -109208524 + LTR16A LTR ERVL 17 360 -90 2654 164 6 43 chr5 90421627 90422097 -109208053 + MLT2B2 LTR ERVL 1 453 -62 598 305 81 5 chr5 90422159 90422382 -109207768 + HERV16-B2 LTR ERVL 5 244 -4752 355 116 9 7 chr5 90422554 90422786 -109207364 + AluSc SINE Alu 1 294 -5 1376 322 61 12 chr5 90423032 90423977 -109206173 + ERVL LTR ERVL 1750 2811 -2761 15965 94 13 1 chr5 90423981 90426182 -109203968 + L1P LINE L1 2 2229 -3917 295 267 48 14 chr5 90426324 90426471 -109203679 + L1MDa LINE L1 1777 2024 -877 25 51 0 0 chr5 90426657 90426696 -109203454 + AT_rich Low_complexity Low_complexity 1 39 0 1763 230 50 6 chr5 90426738 90427243 -109202907 - L1M4 LINE L1 -770 5376 4850 44144 41 2 1 chr5 90427244 90433036 -109197114 + L1P2 LINE L1 1 5799 -356 1347 147 0 0 chr5 90433149 90433346 -109196804 + MLT1C LTR MaLR 271 467 0 186 361 26 57 chr5 90434046 90434240 -109195910 + L2 LINE L2 3046 3233 -39 23 68 0 0 chr5 90435467 90435511 -109194639 + AT_rich Low_complexity Low_complexity 1 44 0 311 0 26 0 chr5 90437151 90437190 -109192960 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr5 90437286 90437307 -109192843 + AT_rich Low_complexity Low_complexity 1 21 0 2299 82 17 0 chr5 90437310 90437604 -109192546 + AluY SINE Alu 1 299 -12 2492 202 15 0 chr5 90437675 90438224 -109191926 - L1PB1 LINE L1 -1059 5087 4531 * 3627 115 15 8 chr5 90438223 90438907 -109191243 + L1PB1 LINE L1 5104 5792 -359 315 198 10 73 chr5 90438917 90439013 -109191137 - L1MC4 LINE L1 -1339 6703 6614 223 218 0 18 chr5 90439015 90439070 -109191080 + (TA)n Simple_repeat Simple_repeat 1 54 0 2435 103 11 0 chr5 90439071 90439430 -109190720 + L1PB1 LINE L1 5785 6147 -4 21 57 0 0 chr5 90441664 90441699 -109188451 + AT_rich Low_complexity Low_complexity 1 35 0 2764 192 54 70 chr5 90442091 90442519 -109187631 - L1ME1 LINE L1 -5 6161 5749 2294 96 7 0 chr5 90442519 90442822 -109187328 - AluSp SINE Alu -8 305 1 2764 192 54 70 chr5 90442822 90443139 -109187011 - L1ME1 LINE L1 -417 5749 5428 318 258 11 22 chr5 90443151 90443240 -109186910 - HERV16 LTR ERVL -2331 2665 2578 476 152 36 36 chr5 90443252 90443364 -109186786 - L1ME1 LINE L1 -782 5460 5349 235 237 59 42 chr5 90443396 90443514 -109186636 + MLT1L LTR MaLR 496 615 0 296 382 68 25 chr5 90443646 90443926 -109186224 + L2 LINE L2 2584 2875 -439 254 169 0 42 chr5 90444227 90444298 -109185852 - Charlie4 DNA MER1_type -1700 261 194 798 196 0 0 chr5 90444942 90445080 -109185070 - FLAM_C SINE Alu -5 138 1 1053 279 78 14 chr5 90447630 90448142 -109182008 + L1M4 LINE L1 3577 4121 -2025 16660 178 24 60 chr5 90448167 90450186 -109179964 + L1PA15-16 LINE L1 2 2091 -4758 2201 138 88 15 chr5 90450186 90450585 -109179565 - MSTA LTR MaLR 0 428 1 8173 195 24 16 chr5 90450585 90452224 -109177926 - MSTA-int LTR MaLR 0 1651 1 2088 143 114 5 chr5 90452224 90452610 -109177540 - MSTA LTR MaLR 0 428 1 16660 178 24 60 chr5 90452610 90455112 -109175038 + L1PA15-16 LINE L1 2088 4383 -2466 910 134 0 7 chr5 90455112 90455254 -109174896 + L1PA16 LINE L1 6017 6157 -9 317 254 103 27 chr5 90455268 90455492 -109174658 + L1M4 LINE L1 4156 4396 -1750 2184 118 48 25 chr5 90455501 90455857 -109174293 + THE1B LTR MaLR 1 364 0 4052 91 4 5 chr5 90455857 90456420 -109173730 + THE1B-int LTR MaLR 1 562 -1018 2227 141 114 0 chr5 90456644 90457020 -109173130 - MSTB LTR MaLR -4 422 4 3059 216 19 35 chr5 90457225 90458003 -109172147 + L1MA9 LINE L1 5509 6274 -38 242 120 50 20 chr5 90458005 90458105 -109172045 + (TA)n Simple_repeat Simple_repeat 1 103 0 43 35 0 0 chr5 90458105 90458162 -109171988 + AT_rich Low_complexity Low_complexity 1 57 0 24 0 0 0 chr5 90458246 90458270 -109171880 + AT_rich Low_complexity Low_complexity 1 24 0 304 150 80 80 chr5 90458428 90458528 -109171622 - Charlie7 DNA MER1_type -1 2611 2512 387 273 203 4 chr5 90458538 90458765 -109171385 - Charlie7 DNA MER1_type -1929 683 412 1261 201 129 33 chr5 90458879 90459212 -109170938 - MLT1A1 LTR MaLR 0 365 1 735 193 15 0 chr5 90459441 90459576 -109170574 - MSTA LTR MaLR 0 396 260 225 0 0 0 chr5 90459586 90459611 -109170539 + (A)n Simple_repeat Simple_repeat 1 25 0 * 3455 144 23 9 chr5 90459610 90460179 -109169971 - L1PA15 LINE L1 -13 6152 5576 5440 127 24 9 chr5 90459612 90460693 -109169457 - L1PA15 LINE L1 -15 6150 5052 706 217 102 66 chr5 90460732 90460976 -109169174 - MSTA LTR MaLR -138 258 6 211 388 10 20 chr5 90461277 90461375 -109168775 - L2 LINE L2 -18 3295 3199 1120 184 77 0 chr5 90461955 90462162 -109167988 - MER58A DNA MER1_type 0 224 2 425 252 107 59 chr5 90462303 90462573 -109167577 - L1ME4a LINE L1 -93 6028 5746 645 271 83 61 chr5 90463137 90463541 -109166609 - MLT1J LTR MaLR -36 475 15 273 128 0 0 chr5 90463950 90463997 -109166153 + (TC)n Simple_repeat Simple_repeat 2 48 0 266 311 28 57 chr5 90464017 90464194 -109165956 + MIR SINE MIR 90 261 -1 2029 118 4 0 chr5 90464661 90464981 -109165169 - AluSx SINE Alu 0 323 3 751 102 16 0 chr5 90465535 90465663 -109164487 + (TC)n Simple_repeat Simple_repeat 2 131 0 1487 235 148 13 chr5 90467244 90467691 -109162459 + MLT1H LTR MaLR 43 549 0 5008 228 34 79 chr5 90467925 90469581 -109160569 + L1MC4a LINE L1 6003 7592 -216 2119 143 57 14 chr5 90469581 90469930 -109160220 + THE1B LTR MaLR 1 364 0 5008 228 34 79 chr5 90469930 90470138 -109160012 + L1MC4a LINE L1 7592 7808 0 216 390 11 0 chr5 90470571 90470666 -109159484 - L2 LINE L2 -26 3287 3192 237 33 0 0 chr5 90470936 90470966 -109159184 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 3269 180 35 13 chr5 90470969 90471651 -109158499 - L1MB1 LINE L1 0 6168 5472 259 226 0 0 chr5 90471651 90471704 -109158446 + L1M2 LINE L1 5099 5151 -995 676 103 71 16 chr5 90471805 90471931 -109158219 + L1M2 LINE L1 5353 5485 -827 1269 182 5 0 chr5 90472459 90472668 -109157482 + MER2 DNA MER2_type 1 210 -135 336 306 49 42 chr5 90472784 90472928 -109157222 + L3 LINE CR1 1224 1368 -209 1442 253 66 58 chr5 90472936 90473419 -109156731 - MLT1J LTR MaLR -15 496 10 1452 166 11 32 chr5 90473465 90473749 -109156401 - MLT1B LTR MaLR 0 390 113 7974 157 6 16 chr5 90473751 90475977 -109154173 - L1PB2 LINE L1 -9 6142 3944 2553 53 0 0 chr5 90475977 90476278 -109153872 + AluY SINE Alu 1 301 -10 7974 157 6 16 chr5 90476278 90476544 -109153606 - L1PB2 LINE L1 -2207 3944 3677 608 183 0 32 chr5 90476545 90476671 -109153479 - MLT1B LTR MaLR -265 125 4 2945 141 11 12 chr5 90477263 90478006 -109152144 + L1MA6 LINE L1 4988 5730 -570 1847 125 139 12 chr5 90478116 90478460 -109151690 + L1MA6 LINE L1 5907 6294 -6 431 269 50 30 chr5 90478524 90478614 -109151536 - L1MC4 LINE L1 -51 7991 7904 219 69 0 0 chr5 90478614 90478643 -109151507 + (CA)n Simple_repeat Simple_repeat 2 30 0 431 269 50 30 chr5 90478643 90478849 -109151301 - L1MC4 LINE L1 -138 7904 7689 360 242 97 57 chr5 90479321 90479445 -109150705 + L2 LINE L2 3185 3313 0 515 285 56 0 chr5 90480670 90480814 -109149336 + MIR SINE MIR 10 161 -101 320 276 79 54 chr5 90480972 90481235 -109148915 + MLT1L LTR MaLR 231 615 0 361 295 0 11 chr5 90481235 90481330 -109148820 + MIR SINE MIR 140 233 -29 23 0 0 0 chr5 90481387 90481410 -109148740 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 90481784 90481805 -109148345 + AT_rich Low_complexity Low_complexity 1 21 0 207 139 0 0 chr5 90483005 90483041 -109147109 + (CA)n Simple_repeat Simple_repeat 1 36 0 1889 142 80 20 chr5 90483722 90484074 -109146076 - THE1C LTR MaLR -2 373 1 21 36 0 0 chr5 90486473 90486501 -109143649 + AT_rich Low_complexity Low_complexity 1 28 0 42044 39 24 2 chr5 90488545 90494564 -109135586 + L1PA2 LINE L1 2 6155 0 21 89 0 0 chr5 90495294 90495350 -109134800 + AT_rich Low_complexity Low_complexity 1 56 0 3623 172 7 28 chr5 90495989 90496693 -109133457 + L1PB4 LINE L1 5467 6155 -1 240 262 16 0 chr5 90496827 90496888 -109133262 + L2 LINE L2 2990 3051 -221 228 333 95 0 chr5 90497051 90497156 -109132994 - L2 LINE L2 -43 3229 3115 44 46 0 0 chr5 90497310 90497375 -109132775 + AT_rich Low_complexity Low_complexity 1 65 0 7641 261 92 31 chr5 90497464 90502869 -109127281 + L1MA4A LINE L1 10 5079 -1926 2048 96 30 4 chr5 90502869 90503140 -109127010 + AluSg SINE Alu 1 278 -32 216 0 0 0 chr5 90503142 90503166 -109126984 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 7641 261 92 31 chr5 90503166 90503894 -109126256 + L1MA4A LINE L1 5079 5761 -1244 189 0 0 0 chr5 90503894 90503915 -109126235 + (CA)n Simple_repeat Simple_repeat 2 22 0 7641 261 92 31 chr5 90503915 90504031 -109126119 + L1MA4A LINE L1 5761 6611 -394 854 167 0 0 chr5 90504035 90504167 -109125983 + AluSx SINE Alu 5 136 -177 2075 141 0 0 chr5 90504167 90504464 -109125686 + AluSx SINE Alu 1 297 -15 467 118 12 0 chr5 90504466 90504551 -109125599 + (TA)n Simple_repeat Simple_repeat 2 87 0 189 0 0 0 chr5 90504554 90504575 -109125575 + (CA)n Simple_repeat Simple_repeat 2 22 0 1169 133 0 0 chr5 90504576 90504741 -109125409 + AluSx SINE Alu 133 297 -15 910 190 21 9 chr5 90504741 90505075 -109125075 + L1MA4A LINE L1 6601 6999 -6 14380 173 7 11 chr5 90505085 90508133 -109122017 + L1PA14 LINE L1 1 3314 -4270 2409 108 30 25 chr5 90508133 90508495 -109121655 - THE1B LTR MaLR 0 364 1 14380 173 7 11 chr5 90508495 90509226 -109120924 + L1PA14 LINE L1 3314 4047 -3537 2390 137 8 0 chr5 90509230 90509589 -109120561 + THE1B LTR MaLR 3 364 0 7825 117 66 61 chr5 90509589 90511172 -109118978 + THE1B-int LTR MaLR 1 1580 0 2340 125 9 5 chr5 90511172 90511517 -109118633 + THE1B LTR MaLR 1 442 -15 13474 190 21 1 chr5 90511517 90515054 -109115096 + L1PA14 LINE L1 4045 7596 -3 471 226 44 19 chr5 90515174 90515333 -109114817 - MER103 DNA DNA 0 166 4 307 220 55 46 chr5 90515361 90515470 -109114680 + L1MC4 LINE L1 1954 2063 -4363 344 232 15 10 chr5 90515480 90515584 -109114566 + L1MC4 LINE L1 1995 6983 -1339 213 333 176 0 chr5 90515913 90516015 -109114135 + MIR3 SINE MIR 71 190 -18 236 132 0 0 chr5 90516058 90516096 -109114054 + tRNA-Gly-GGA tRNA tRNA 1 38 -37 410 278 65 18 chr5 90517403 90517572 -109112578 - MER5B DNA MER1_type -1 177 1 344 222 68 60 chr5 90518115 90518232 -109111918 - L1ME4a LINE L1 -15 6106 5989 309 26 0 0 chr5 90518328 90518366 -109111784 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 1610 104 5 9 chr5 90518378 90518600 -109111550 - AluSx SINE Alu -53 259 39 594 316 130 44 chr5 90518604 90519466 -109110684 - L1ME4a LINE L1 -278 5843 4911 26 30 0 0 chr5 90519644 90519677 -109110473 + AT_rich Low_complexity Low_complexity 1 33 0 2750 203 59 20 chr5 90520160 90520755 -109109395 + MLT1E3 LTR MaLR 7 624 0 21 57 0 0 chr5 90522422 90522457 -109107693 + AT_rich Low_complexity Low_complexity 1 35 0 578 282 27 0 chr5 90523173 90523322 -109106828 - MIR SINE MIR -43 219 67 202 198 22 44 chr5 90523555 90523646 -109106504 + A-rich Low_complexity Low_complexity 3 91 0 307 289 41 0 chr5 90523712 90523809 -109106341 + MER94 DNA DNA 1 101 -33 21 0 0 0 chr5 90526391 90526412 -109103738 + AT_rich Low_complexity Low_complexity 1 21 0 444 104 0 0 chr5 90526462 90526529 -109103621 + (CA)n Simple_repeat Simple_repeat 2 68 0 23 0 0 0 chr5 90529605 90529628 -109100522 + AT_rich Low_complexity Low_complexity 1 23 0 190 164 36 0 chr5 90530077 90530132 -109100018 + (TG)n Simple_repeat Simple_repeat 2 58 0 24 0 0 0 chr5 90530881 90530905 -109099245 + AT_rich Low_complexity Low_complexity 1 24 0 206 299 88 29 chr5 90532014 90532151 -109097999 - L2 LINE L2 -22 3291 3147 253 277 83 51 chr5 90532175 90532333 -109097817 - MIR3 SINE MIR -80 128 13 268 284 88 62 chr5 90533185 90533379 -109096771 + MLT2F LTR ERVL 30 228 -435 * 758 283 108 3 chr5 90533377 90533663 -109096487 + MLT2F LTR ERVL 348 663 0 959 240 94 51 chr5 90533677 90533759 -109096391 + MLT1A1 LTR MaLR 1 78 -287 2289 121 27 21 chr5 90533759 90534132 -109096018 + THE1C LTR MaLR 1 375 0 959 240 94 51 chr5 90534132 90534399 -109095751 + MLT1A1 LTR MaLR 78 365 0 1783 214 48 3 chr5 90534543 90534922 -109095228 + MSTD LTR MaLR 1 396 0 710 245 19 39 chr5 90534961 90535169 -109094981 - MIR SINE MIR -58 204 1 305 193 14 14 chr5 90535194 90535277 -109094873 - MLT1J2 LTR MaLR -18 428 309 416 216 10 10 chr5 90535371 90535468 -109094682 - MLT1J2 LTR MaLR -275 175 79 2022 287 145 54 chr5 90535770 90536348 -109093802 - HAL1 LINE L1 -611 1896 1372 327 25 0 0 chr5 90536348 90536388 -109093762 + (TC)n Simple_repeat Simple_repeat 1 40 0 1714 166 4 0 chr5 90536389 90536667 -109093483 - AluJb SINE Alu -33 279 1 2022 287 145 54 chr5 90536667 90536978 -109093172 - HAL1 LINE L1 -1135 1372 1091 195 42 0 0 chr5 90536978 90537002 -109093148 + (TC)n Simple_repeat Simple_repeat 1 24 0 2022 287 145 54 chr5 90537002 90537842 -109092308 - HAL1 LINE L1 -1416 1091 6 277 345 109 8 chr5 90537851 90537970 -109092180 + L2 LINE L2 3123 3253 -19 3337 101 11 0 chr5 90538058 90538533 -109091617 - L1PA13 LINE L1 -4 6159 5680 895 86 5 183 chr5 90538535 90538732 -109091418 + L1P4 LINE L1 5563 5724 -444 259 301 98 24 chr5 90539719 90539842 -109090308 - L2 LINE L2 -17 3296 3165 269 316 170 51 chr5 90539946 90540398 -109089752 - L2 LINE L2 -350 2964 2459 1284 145 20 35 chr5 90540398 90540653 -109089497 + L1MB2 LINE L1 5906 6156 -15 1930 182 17 6 chr5 90540825 90541183 -109088967 + MLT1A1 LTR MaLR 4 365 0 26 0 0 0 chr5 90541361 90541387 -109088763 + AT_rich Low_complexity Low_complexity 1 26 0 2095 97 39 0 chr5 90542189 90542468 -109087682 + AluY SINE Alu 1 290 -21 8239 30 2 0 chr5 90542545 90544293 -109085857 + L1PA4 LINE L1 4403 6152 -3 24 0 0 0 chr5 90544293 90544317 -109085833 + AT_rich Low_complexity Low_complexity 1 24 0 637 265 76 25 chr5 90545867 90546154 -109083996 + MLT1I LTR MaLR 102 448 -2 456 51 0 0 chr5 90548220 90548279 -109081871 + (A)n Simple_repeat Simple_repeat 1 59 0 1182 211 155 29 chr5 90548791 90549166 -109080984 - MLT1D LTR MaLR 0 505 84 213 132 0 0 chr5 90550106 90550144 -109080006 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 296 268 137 60 chr5 90550239 90550407 -109079743 - MIR SINE MIR -53 209 29 558 281 41 31 chr5 90551382 90551578 -109078572 + MLT1L LTR MaLR 197 394 -221 295 271 34 17 chr5 90551633 90551751 -109078399 + MLT1L LTR MaLR 489 608 -7 1634 175 0 14 chr5 90551830 90552127 -109078023 - AluJo SINE Alu 0 312 20 194 313 88 40 chr5 90552675 90552902 -109077248 - L2 LINE L2 -831 2483 2246 264 312 87 39 chr5 90553012 90553243 -109076907 - MIR SINE MIR -14 248 7 2150 118 150 5 chr5 90553797 90554171 -109075979 - MSTA LTR MaLR 0 428 1 251 333 38 30 chr5 90554268 90554400 -109075750 - L2 LINE L2 -2 3270 3138 31792 111 19 63 chr5 90555847 90561483 -109068667 + L1P LINE L1 12 5401 -745 2473 60 30 15 chr5 90561445 90561776 -109068374 - L1PA7 LINE L1 -301 5853 5518 * 2618 143 26 5 chr5 90561967 90562386 -109067764 + MSTA LTR MaLR 1 428 0 811 229 109 0 chr5 90563259 90563451 -109066699 - MER58A DNA MER1_type -11 213 1 25 51 0 0 chr5 90564280 90564319 -109065831 + AT_rich Low_complexity Low_complexity 1 39 0 222 263 88 0 chr5 90564323 90564380 -109065770 + L2 LINE L2 3234 3295 -18 213 250 194 16 chr5 90565011 90565135 -109065015 + MER5A DNA MER1_type 44 189 0 521 305 132 18 chr5 90565219 90565658 -109064492 + MARNA DNA Mariner 50 538 -48 1925 148 146 11 chr5 90566020 90566397 -109063753 - MSTA LTR MaLR 0 428 1 8638 146 18 43 chr5 90566397 90568009 -109062141 - MSTA-int LTR MaLR 0 1580 10 47 86 0 0 chr5 90568040 90568157 -109061993 + AT_rich Low_complexity Low_complexity 1 117 0 1514 176 178 22 chr5 90568171 90568360 -109061790 - MSTA LTR MaLR 0 428 270 189 0 0 0 chr5 90568360 90568381 -109061769 + (GA)n Simple_repeat Simple_repeat 1 21 0 1514 176 178 22 chr5 90568381 90568561 -109061589 - MSTA LTR MaLR -158 270 1 309 302 79 40 chr5 90568782 90568908 -109061242 + MIR SINE MIR 3 133 -129 216 158 0 0 chr5 90568956 90568994 -109061156 + (TTG)n Simple_repeat Simple_repeat 1 38 0 1089 210 17 0 chr5 90569009 90569242 -109060908 - Tigger2a DNA MER2_type -1 443 207 1533 196 7 24 chr5 90569242 90569533 -109060617 + AluJo SINE Alu 6 291 -21 825 115 44 9 chr5 90569538 90569764 -109060386 + GA-rich Low_complexity Low_complexity 1 234 0 968 156 63 55 chr5 90569764 90570001 -109060149 - Tigger2a DNA MER2_type -195 239 1 291 340 19 0 chr5 90570066 90570172 -109059978 - L2 LINE L2 -248 3024 2917 385 259 223 0 chr5 90570569 90570708 -109059442 + MIR SINE MIR 84 253 -9 187 405 0 0 chr5 90571092 90571171 -109058979 + MIR SINE MIR 33 111 -97 677 316 6 63 chr5 90571171 90571414 -109058736 + MIR SINE MIR 10 235 -27 252 246 88 79 chr5 90571430 90571544 -109058606 + MIR SINE MIR 98 212 -50 2364 88 0 28 chr5 90572513 90572831 -109057319 - AluY SINE Alu 0 311 3 24 0 0 0 chr5 90573732 90573756 -109056394 + AT_rich Low_complexity Low_complexity 1 24 0 2521 74 0 6 chr5 90574510 90574822 -109055328 + AluY SINE Alu 1 310 -1 1564 218 27 17 chr5 90574832 90575244 -109054906 + L1ME1 LINE L1 5730 6145 -21 191 296 0 42 chr5 90575337 90575408 -109054742 + L2 LINE L2 2992 3059 -213 2139 82 21 0 chr5 90575639 90575921 -109054229 - AluSg SINE Alu -22 288 1 209 192 0 58 chr5 90576237 90576289 -109053861 + L2 LINE L2 3264 3312 -1 214 148 0 56 chr5 90577209 90577263 -109052887 + (GGA)n Simple_repeat Simple_repeat 1 51 0 204 40 0 0 chr5 90577331 90577356 -109052794 + (GGGGA)n Simple_repeat Simple_repeat 3 27 0 287 48 0 24 chr5 90577626 90577668 -109052482 + (CCCCCG)n Simple_repeat Simple_repeat 2 42 0 378 0 0 0 chr5 90578093 90578135 -109052015 + (CA)n Simple_repeat Simple_repeat 1 42 0 213 94 0 0 chr5 90578354 90578386 -109051764 + (CA)n Simple_repeat Simple_repeat 2 33 0 200 118 29 0 chr5 90578565 90578599 -109051551 + (CA)n Simple_repeat Simple_repeat 2 36 0 198 143 0 0 chr5 90578776 90578811 -109051339 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 183 129 0 0 chr5 90580037 90580068 -109050082 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 23 0 0 0 chr5 90580942 90580965 -109049185 + AT_rich Low_complexity Low_complexity 1 23 0 611 307 17 39 chr5 90585164 90585395 -109044755 - MIR SINE MIR -34 228 3 436 274 111 58 chr5 90585557 90585783 -109044367 + MIR SINE MIR 25 262 0 197 232 54 0 chr5 90585999 90586055 -109044095 - L2 LINE L2 -70 3243 3185 320 276 107 68 chr5 90586218 90586544 -109043606 - HAL1 LINE L1 0 2507 2169 1132 297 80 28 chr5 90586996 90587894 -109042256 - HAL1 LINE L1 -604 1903 959 230 273 55 44 chr5 90587992 90588175 -109041975 - HAL1 LINE L1 -1559 948 764 265 374 28 0 chr5 90589271 90589378 -109040772 + L2 LINE L2 3160 3269 -3 342 0 0 0 chr5 90592272 90592310 -109037840 + (TG)n Simple_repeat Simple_repeat 1 38 0 308 278 61 9 chr5 90594023 90594138 -109036012 + MER20 DNA MER1_type 99 219 0 1536 160 20 108 chr5 90594445 90594845 -109035305 + MLT1A1 LTR MaLR 1 365 0 432 185 93 0 chr5 90595064 90595172 -109034978 + L1MC4 LINE L1 6960 7077 -965 1334 245 101 58 chr5 90595192 90595499 -109034651 + L1MC4 LINE L1 7256 7549 -493 2212 87 0 0 chr5 90595499 90595776 -109034374 + AluSc SINE Alu 1 277 -32 225 0 0 0 chr5 90595776 90595801 -109034349 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1334 245 101 58 chr5 90595801 90596108 -109034042 + L1MC4 LINE L1 7548 7897 -145 222 37 0 0 chr5 90596112 90596139 -109034011 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 268 200 0 0 chr5 90596144 90596199 -109033951 + L1MD3 LINE L1 7926 7980 -15 372 380 37 21 chr5 90596209 90596396 -109033754 - L2 LINE L2 -12 3260 3071 2303 102 3 0 chr5 90596580 90596883 -109033267 + AluSp SINE Alu 3 306 -7 3605 240 57 6 chr5 90597051 90597784 -109032366 - L1PA15 LINE L1 0 6165 5395 236 311 118 22 chr5 90597821 90597956 -109032194 - MIR SINE MIR -56 206 59 182 304 71 45 chr5 90598473 90598585 -109031565 - MIR SINE MIR -60 202 88 7245 48 0 0 chr5 90598839 90599762 -109030388 - L1PA5 LINE L1 -5 6149 5227 632 211 59 0 chr5 90600293 90600361 -109029789 - MER69 DNA AcHobo 0 2526 2463 2345 87 0 3 chr5 90600361 90600661 -109029489 + AluSc SINE Alu 1 299 -10 632 211 59 0 chr5 90600661 90600796 -109029354 - MER69 DNA AcHobo -63 2463 2311 793 246 61 23 chr5 90600804 90601068 -109029082 - MER69 DNA AcHobo -776 450 177 284 333 104 15 chr5 90601738 90601873 -109028277 + L2 LINE L2 3126 3272 0 58 90 0 0 chr5 90602808 90602964 -109027186 + AT_rich Low_complexity Low_complexity 1 156 0 18437 90 15 6 chr5 90603037 90606586 -109023564 - L1PA7 LINE L1 0 6469 2880 10807 117 31 26 chr5 90606593 90608550 -109021600 - L1PA7 LINE L1 -4464 1997 2 1730 209 86 30 chr5 90608550 90609052 -109021098 - MER44D DNA MER2_type -17 588 4 4253 187 36 27 chr5 90609055 90609662 -109020488 - L1MC3 LINE L1 -26 7782 7172 2268 108 7 7 chr5 90609662 90609968 -109020182 + AluSq SINE Alu 1 306 -7 4253 187 36 27 chr5 90609968 90610424 -109019726 - L1MC3 LINE L1 -636 7172 6722 309 178 47 15 chr5 90610431 90610518 -109019632 + AluSc SINE Alu 210 276 -23 1699 164 3 3 chr5 90610565 90610875 -109019275 - L1MC3 LINE L1 -1867 5918 5609 3449 106 11 23 chr5 90610883 90611403 -109018747 - L1PA11 LINE L1 0 6174 5661 1547 195 11 3 chr5 90611403 90611685 -109018465 + AluJb SINE Alu 1 312 0 232 36 0 0 chr5 90611685 90611713 -109018437 + (TAA)n Simple_repeat Simple_repeat 2 180 0 2309 38 67 32 chr5 90611743 90612058 -109018092 - LTR17 LTR ERV1 -454 326 1 2021 68 0 0 chr5 90612058 90612310 -109017840 - HERV17 LTR ERV1 0 8626 8375 3574 78 43 21 chr5 90612340 90612854 -109017296 - LTR17 LTR ERV1 0 780 256 2310 67 3 0 chr5 90612854 90613151 -109016999 - L1P4 LINE L1 -498 5676 5379 933 182 18 6 chr5 90613162 90613332 -109016818 - L1MC3 LINE L1 -2187 5598 5427 27 29 0 0 chr5 90614301 90614335 -109015815 + AT_rich Low_complexity Low_complexity 1 34 0 934 213 171 35 chr5 90614417 90614792 -109015358 - L1ME3A LINE L1 -1 6169 5744 456 279 114 0 chr5 90614840 90615041 -109015109 - L1ME LINE L1 -374 5796 5573 736 262 169 46 chr5 90615204 90615746 -109014404 - L1ME LINE L1 -671 5493 5019 801 41 179 0 chr5 90615746 90615869 -109014281 + L1MA3 LINE L1 6160 6304 -1 736 262 169 46 chr5 90615869 90616244 -109013906 - L1ME LINE L1 -1145 5019 4452 713 44 142 18 chr5 90616518 90616631 -109013519 + L1MA3 LINE L1 6178 6304 -1 2604 279 103 24 chr5 90616645 90618044 -109012106 - L1MC3 LINE L1 -1288 4858 3349 1248 129 31 13 chr5 90618046 90618271 -109011879 - MER46A DNA MER2_type -6 230 2 2265 224 60 29 chr5 90618549 90618810 -109011340 - L1ME2 LINE L1 -14 6150 5890 529 271 161 36 chr5 90618810 90619256 -109010894 - L1MA7 LINE L1 -404 5887 5386 2724 226 105 44 chr5 90619434 90619959 -109010191 + L1MEc LINE L1 196 688 -5708 6663 145 51 0 chr5 90619959 90621129 -109009021 - Tigger3b DNA MER2_type 0 1231 2 2724 226 105 44 chr5 90621129 90621574 -109008576 + L1MEc LINE L1 688 1225 -5171 1410 222 222 30 chr5 90622136 90622367 -109007783 - L1ME2 LINE L1 -744 5402 5217 1691 109 106 0 chr5 90622367 90622652 -109007498 + AluSx SINE Alu 1 312 0 1410 222 222 30 chr5 90622652 90623062 -109007088 - L1ME2 LINE L1 -929 5217 4636 465 222 127 11 chr5 90623223 90623412 -109006738 - L1ME2 LINE L1 -1599 4547 4337 252 290 97 11 chr5 90623493 90623679 -109006471 - L1MC3 LINE L1 -2885 3261 3060 347 261 63 0 chr5 90623737 90623879 -109006271 - L1MC3 LINE L1 -3211 2935 2785 2022 129 0 36 chr5 90623896 90624205 -109005945 - AluSq SINE Alu -13 300 3 289 219 53 70 chr5 90624207 90624321 -109005829 - L1MC3 LINE L1 -3312 2834 2723 355 42 21 0 chr5 90624321 90624369 -109005781 + MLT2A1 LTR ERVL 1 49 -395 840 188 11 21 chr5 90624411 90624597 -109005553 - LTR2 LTR ERV1 0 449 266 289 254 17 92 chr5 90624593 90624766 -109005384 - LTR2 LTR ERV1 -289 160 1 * 379 162 0 0 chr5 90624766 90624840 -109005310 - Harlequin LTR ERV1 -1 6895 6822 328 229 0 0 chr5 90624836 90624897 -109005253 - Harlequin LTR ERV1 -1369 5527 5467 * 538 176 0 0 chr5 90624899 90624990 -109005160 - HERVE LTR ERV1 -1808 6005 5915 11702 68 9 1 chr5 90625027 90626520 -109003630 - HERVE LTR ERV1 -1991 5822 4318 324 259 0 0 chr5 90627034 90627115 -109003035 + L1M3d LINE L1 2 82 -5809 496 234 21 50 chr5 90627149 90627290 -109002860 + L2 LINE L2 3175 3311 -2 2464 53 3 3 chr5 90627466 90627769 -109002381 + AluY SINE Alu 1 303 -8 393 22 0 0 chr5 90627772 90627818 -109002332 + (TA)n Simple_repeat Simple_repeat 1 46 0 183 42 0 0 chr5 90628016 90628040 -109002110 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3263 187 13 3 chr5 90629776 90630413 -108999737 - L1PA16 LINE L1 -6 6160 5518 343 302 18 41 chr5 90630425 90630594 -108999556 + MARNA DNA Mariner 316 480 -106 33 0 0 0 chr5 90631135 90631168 -108998982 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 90634002 90634023 -108996127 + AT_rich Low_complexity Low_complexity 1 21 0 855 135 8 0 chr5 90634096 90634222 -108995928 + FLAM_C SINE Alu 1 127 -16 284 333 95 24 chr5 90637179 90637347 -108992803 + MIR SINE MIR 77 256 -6 626 277 81 1 chr5 90637806 90638004 -108992146 - MIR SINE MIR -10 252 40 395 264 66 54 chr5 90638141 90638399 -108991751 + L1MC4 LINE L1 7741 8001 -41 330 349 40 14 chr5 90638967 90639177 -108990973 - MIR SINE MIR -27 235 21 495 0 0 0 chr5 90639533 90639588 -108990562 + (TA)n Simple_repeat Simple_repeat 2 56 0 42 86 0 0 chr5 90641164 90641269 -108988881 + AT_rich Low_complexity Low_complexity 1 105 0 22 0 0 0 chr5 90641731 90641753 -108988397 + AT_rich Low_complexity Low_complexity 1 22 0 180 219 333 31 chr5 90643698 90643794 -108986356 - MIR SINE MIR -6 256 132 221 0 35 0 chr5 90643809 90643838 -108986312 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2215 89 0 10 chr5 90643843 90643978 -108986172 + AluSq SINE Alu 1 136 -177 2210 76 3 0 chr5 90643978 90644268 -108985882 + AluY SINE Alu 2 292 -19 2215 89 0 10 chr5 90644268 90644436 -108985714 + AluSq SINE Alu 136 301 -12 312 266 55 18 chr5 90644460 90644569 -108985581 - MIR SINE MIR -137 125 13 1214 168 48 0 chr5 90644708 90644917 -108985233 - MER46B DNA MER2_type -142 94 1 541 298 50 11 chr5 90645807 90645988 -108984162 + MIR SINE MIR 1 188 -74 22 56 0 0 chr5 90646139 90646175 -108983975 + AT_rich Low_complexity Low_complexity 1 36 0 615 295 172 42 chr5 90646225 90646672 -108983478 + HAL1 LINE L1 355 859 -1648 832 213 76 15 chr5 90646678 90646875 -108983275 - MER58C DNA MER1_type -1 214 6 203 263 0 13 chr5 90647018 90647094 -108983056 + (TA)n Simple_repeat Simple_repeat 2 76 0 1145 228 130 45 chr5 90647095 90647260 -108982890 + HAL1 LINE L1 980 1130 -1377 2043 101 13 41 chr5 90647260 90647578 -108982572 + AluSq SINE Alu 3 311 -2 1145 228 130 45 chr5 90647578 90648122 -108982028 + HAL1 LINE L1 1130 1749 -758 1580 185 14 4 chr5 90648326 90648607 -108981543 + AluSx SINE Alu 1 284 -28 33 43 0 0 chr5 90649085 90649132 -108981018 + AT_rich Low_complexity Low_complexity 1 47 0 1485 191 42 17 chr5 90651757 90652045 -108978105 + AluJo SINE Alu 1 295 -17 362 271 138 108 chr5 90652519 90652888 -108977262 + HAL1 LINE L1 5 384 -2123 982 171 0 6 chr5 90652889 90653047 -108977103 + FRAM SINE Alu 1 155 -21 430 224 274 22 chr5 90653052 90653275 -108976875 + HAL1 LINE L1 10 288 -2219 245 156 22 0 chr5 90653462 90653507 -108976643 + HAL1 LINE L1 443 488 -2019 1042 235 61 121 chr5 90653529 90654044 -108976106 + HAL1 LINE L1 775 1278 -1229 252 191 0 0 chr5 90654044 90654086 -108976064 - 5S rRNA rRNA -79 42 1 1042 235 61 121 chr5 90654086 90654264 -108975886 + HAL1 LINE L1 1278 1465 -1042 489 150 30 10 chr5 90654285 90654486 -108975664 + AluJb SINE Alu 1 301 -11 1104 292 85 20 chr5 90654486 90654934 -108975216 + HAL1 LINE L1 1481 1957 -550 583 277 60 31 chr5 90654942 90655344 -108974806 + HAL1 LINE L1 1240 2424 -83 909 218 184 42 chr5 90655451 90655809 -108974341 + HAL1 LINE L1 1549 1957 -550 377 247 75 7 chr5 90655851 90655997 -108974153 + HAL1 LINE L1 2057 2212 -295 332 279 123 28 chr5 90656031 90656210 -108973940 + HAL1 LINE L1 2309 2504 -3 240 35 0 0 chr5 90656503 90656532 -108973618 + (A)n Simple_repeat Simple_repeat 1 29 0 1801 129 73 0 chr5 90657020 90657292 -108972858 + AluSx SINE Alu 4 295 -17 1587 171 0 0 chr5 90657898 90658149 -108972001 - AluJb SINE Alu -61 251 1 222 320 154 39 chr5 90658957 90659113 -108971037 + MIR SINE MIR 63 236 -26 2432 66 0 7 chr5 90659387 90659691 -108970459 + AluY SINE Alu 1 302 -9 368 276 141 29 chr5 90659983 90660153 -108969997 + MER5A DNA MER1_type 1 189 0 22 35 0 0 chr5 90660197 90660226 -108969924 + AT_rich Low_complexity Low_complexity 1 29 0 2137 153 25 55 chr5 90660454 90660741 -108969409 + Tigger2a DNA MER2_type 1 272 -2436 2561 52 0 0 chr5 90660741 90661048 -108969102 - AluY SINE Alu -4 307 1 2137 153 25 55 chr5 90661048 90661199 -108968951 + Tigger2a DNA MER2_type 272 426 -8 542 198 10 0 chr5 90662275 90662371 -108967779 - FLAM_A SINE Alu -45 97 1 923 200 19 65 chr5 90662616 90662831 -108967319 + AluJo SINE Alu 1 205 -107 710 232 0 7 chr5 90662832 90662970 -108967180 + AluJb SINE Alu 145 281 -31 430 254 60 67 chr5 90663024 90663229 -108966921 + MIR SINE MIR 7 216 -46 185 359 0 26 chr5 90663623 90663701 -108966449 - MIR3 SINE MIR -5 203 128 309 268 56 28 chr5 90663777 90663919 -108966231 - MIR3 SINE MIR -24 184 39 617 229 0 0 chr5 90665548 90665666 -108964484 - FLAM_C SINE Alu -15 118 1 1273 239 40 3 chr5 90665696 90665997 -108964153 + AluJb SINE Alu 1 312 0 350 217 389 5 chr5 90666010 90666231 -108963919 + L1MC5 LINE L1 7602 7907 -54 1605 257 107 64 chr5 90666513 90667221 -108962929 + MER21B LTR ERV1 1 739 -124 211 308 56 28 chr5 90667254 90667361 -108962789 + L2 LINE L2 3195 3304 -9 2887 168 61 80 chr5 90667501 90668160 -108961990 + MER82 DNA MER2_type 2 647 -6 2281 93 0 3 chr5 90668352 90668653 -108961497 - AluY SINE Alu -11 300 1 575 325 167 7 chr5 90668856 90669424 -108960726 - L2 LINE L2 0 3313 2647 406 340 170 0 chr5 90669425 90669672 -108960478 - L2 LINE L2 -792 2522 2234 333 359 127 6 chr5 90670079 90670260 -108959890 - L2 LINE L2 -1935 1379 1177 889 155 0 0 chr5 90670562 90670691 -108959459 + FLAM_C SINE Alu 1 129 -14 1283 228 28 25 chr5 90671150 90671514 -108958636 + MLT1A1 LTR MaLR 1 365 0 23 0 0 0 chr5 90672509 90672532 -108957618 + AT_rich Low_complexity Low_complexity 1 23 0 254 289 105 26 chr5 90672814 90672928 -108957222 + MIR SINE MIR 29 151 -111 572 276 68 105 chr5 90672936 90673364 -108956786 + MLT1J2 LTR MaLR 4 415 -35 686 215 33 31 chr5 90673753 90674011 -108956139 + MER2 DNA MER2_type 20 320 -25 21 36 0 0 chr5 90675528 90675556 -108954594 + AT_rich Low_complexity Low_complexity 1 28 0 612 170 0 9 chr5 90676338 90676444 -108953706 + FLAM_C SINE Alu 25 129 -14 1285 112 34 15 chr5 90676922 90677127 -108953023 - MER2 DNA MER2_type -136 209 1 523 308 140 48 chr5 90677425 90678137 -108952013 + L2 LINE L2 1217 1994 -1320 574 310 5 27 chr5 90678284 90678471 -108951679 + MIR SINE MIR 1 183 -79 252 202 32 21 chr5 90678753 90678847 -108951303 + L1M LINE L1 5284 5378 -2430 5887 105 10 44 chr5 90678862 90680870 -108949280 - L1PA15 LINE L1 -6 6159 4198 21 0 0 0 chr5 90681350 90681371 -108948779 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 90681970 90681992 -108948158 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 90682225 90682260 -108947890 + AT_rich Low_complexity Low_complexity 1 35 0 3943 189 86 55 chr5 90683890 90685465 -108944685 - HUERS-P1 LTR ERV1 -3387 2559 767 3029 178 67 17 chr5 90685461 90685948 -108944202 - HUERS-P1 LTR ERV1 -4466 1480 1019 * 345 47 0 0 chr5 90685948 90685991 -108944159 + (GA)n Simple_repeat Simple_repeat 2 44 0 3029 178 67 17 chr5 90685991 90686175 -108943975 - HUERS-P1 LTR ERV1 -4927 1019 14 313 200 117 67 chr5 90686206 90686326 -108943824 - HUERS-P1 LTR ERV1 -5603 660 535 1776 181 77 156 chr5 90686653 90687442 -108942708 - LTR8A LTR ERV1 0 727 1 316 160 30 170 chr5 90687642 90687742 -108942408 + L2 LINE L2 3227 3312 -1 21 36 0 0 chr5 90687807 90687835 -108942315 + AT_rich Low_complexity Low_complexity 1 28 0 217 324 35 42 chr5 90689405 90689547 -108940603 - L2 LINE L2 -571 2743 2603 28 0 0 0 chr5 90689769 90689797 -108940353 + AT_rich Low_complexity Low_complexity 1 28 0 1552 179 16 44 chr5 90690330 90690649 -108939501 + AluJo SINE Alu 1 310 -2 396 160 27 0 chr5 90691272 90691347 -108938803 + MER116 DNA Mariner 4 80 0 1547 153 36 14 chr5 90692771 90693076 -108937074 + AluSx SINE Alu 3 313 0 26 0 0 0 chr5 90693138 90693164 -108936986 + AT_rich Low_complexity Low_complexity 1 26 0 296 287 105 30 chr5 90693269 90693409 -108936741 + MIR3 SINE MIR 48 199 -9 618 272 68 28 chr5 90695688 90695928 -108934222 + MIR SINE MIR 11 261 -1 1410 199 68 10 chr5 90696216 90696508 -108933642 - AluJo SINE Alu -3 309 1 3362 197 54 20 chr5 90696827 90697174 -108932976 + L1MC1 LINE L1 4264 4598 -1735 231 36 0 0 chr5 90697174 90697202 -108932948 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 3362 197 54 20 chr5 90697202 90698682 -108931468 + L1MC1 LINE L1 4598 6315 -18 420 314 204 4 chr5 90698948 90699203 -108930947 + L2 LINE L2 3006 3311 -2 7014 53 11 10 chr5 90699975 90700888 -108929262 + L1PA8 LINE L1 5254 6167 -5 242 273 0 0 chr5 90700943 90700998 -108929152 + MER5A DNA MER1_type 132 186 -3 2096 138 0 40 chr5 90701042 90701389 -108928761 - MER1B DNA MER1_type 0 337 5 249 345 79 22 chr5 90702259 90702398 -108927752 - MIR3 SINE MIR -1 207 61 346 221 86 57 chr5 90702902 90703042 -108927108 + MIR3 SINE MIR 43 186 -22 2188 178 75 56 chr5 90703364 90703988 -108926162 + MER92B LTR ERV1 1 636 0 419 88 59 20 chr5 90705535 90705637 -108924513 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 183 42 0 0 chr5 90706274 90706298 -108923852 + (T)n Simple_repeat Simple_repeat 1 24 0 1757 188 0 0 chr5 90707809 90708097 -108922053 + AluJb SINE Alu 1 288 -24 1450 162 42 82 chr5 90708110 90708487 -108921663 + MLT1A1 LTR MaLR 4 365 0 210 37 0 0 chr5 90708626 90708653 -108921497 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1809 156 11 0 chr5 90708664 90708947 -108921203 + AluSx SINE Alu 12 297 -15 484 382 79 12 chr5 90709363 90709889 -108920261 - L2 LINE L2 -38 3234 2674 263 272 63 80 chr5 90709911 90710032 -108920118 - L1MEd LINE L1 -4136 2174 2052 702 193 0 0 chr5 90710032 90710151 -108919999 - 5S rRNA rRNA -2 119 1 263 272 63 80 chr5 90710151 90710316 -108919834 - L1MEd LINE L1 -4258 2052 1893 426 264 139 48 chr5 90710479 90711255 -108918895 - L1MEd LINE L1 -4633 1677 788 34 55 0 0 chr5 90711315 90711370 -108918780 + AT_rich Low_complexity Low_complexity 1 55 0 748 191 0 8 chr5 90711839 90711970 -108918180 + FLAM_C SINE Alu 2 131 -2 272 267 247 20 chr5 90712466 90712721 -108917429 + L1ME3A LINE L1 3850 4162 -1984 2250 120 133 0 chr5 90712801 90713177 -108916973 + MSTA LTR MaLR 1 426 -2 658 243 101 25 chr5 90713183 90713549 -108916601 + L1ME3A LINE L1 4307 4700 -1446 1480 203 72 57 chr5 90713561 90714020 -108916130 + L1MB8 LINE L1 5711 6176 -2 369 280 60 28 chr5 90714106 90714324 -108915826 + L1ME3A LINE L1 4860 5084 -1062 1414 203 77 88 chr5 90715029 90715651 -108914499 + L1MC5 LINE L1 6751 7365 -596 1113 217 308 8 chr5 90715855 90716242 -108913908 - MLT1F LTR MaLR 0 542 40 611 281 90 79 chr5 90716284 90716907 -108913243 - MLT1F1-int LTR MaLR -41 1330 701 570 217 7 14 chr5 90717167 90717305 -108912845 - FLAM_C SINE Alu -6 137 1 698 288 32 21 chr5 90717306 90717591 -108912559 - MLT1F1-int LTR MaLR -814 557 270 276 322 70 0 chr5 90717596 90717739 -108912411 - MLT1F1-int LTR MaLR -1217 154 2 1430 240 120 42 chr5 90717740 90718173 -108911977 - MLT1F1 LTR MaLR 0 567 64 2237 139 59 17 chr5 90718173 90718582 -108911568 + MSTB LTR MaLR 1 426 0 1430 240 120 42 chr5 90718582 90718652 -108911498 - MLT1F1 LTR MaLR -503 64 1 768 198 139 8 chr5 90718713 90718971 -108911179 + L1MC5 LINE L1 7608 7899 -62 2332 177 55 10 chr5 90718977 90719482 -108910668 - Tigger7 DNA MER2_type -4 2483 4 435 209 17 9 chr5 90719522 90719637 -108910513 + L1ME3A LINE L1 5175 5290 -856 533 253 147 7 chr5 90719756 90720171 -108909979 + L1ME3A LINE L1 5430 5930 -240 464 200 82 0 chr5 90720357 90720467 -108909683 - MER94 DNA DNA -14 120 2 25 75 0 0 chr5 90720545 90720598 -108909552 + AT_rich Low_complexity Low_complexity 1 53 0 772 259 60 0 chr5 90720723 90720939 -108909211 - MIR SINE MIR -27 235 7 1651 209 70 14 chr5 90720955 90721396 -108908754 - Charlie4a DNA MER1_type -6 502 37 1860 148 3 26 chr5 90721667 90721971 -108908179 + AluJb SINE Alu 1 297 -15 1435 169 100 7 chr5 90722603 90723037 -108907113 + LTR54 LTR ERV1 1 496 -2 240 289 62 0 chr5 90723056 90723153 -108906997 + MIR SINE MIR 112 214 -48 623 240 138 44 chr5 90723704 90724000 -108906150 + MLT1D LTR MaLR 8 331 -174 308 137 3 26 chr5 90724172 90724233 -108905917 - MLT2B1 LTR ERVL 0 520 395 1053 210 36 36 chr5 90724353 90724634 -108905516 + MER93b LTR ERV1 89 369 -4 585 12 37 0 chr5 90724635 90724717 -108905433 + (TAGA)n Simple_repeat Simple_repeat 1 85 0 2038 211 95 17 chr5 90724718 90725183 -108904967 - MLT2B3 LTR ERVL -53 501 1 867 322 110 22 chr5 90725768 90726212 -108903938 + L3 LINE CR1 241 723 -854 338 271 158 6 chr5 90726635 90726812 -108903338 + L1ME LINE L1 5526 5729 -392 442 280 59 116 chr5 90727252 90727673 -108902477 + L3 LINE CR1 1128 1524 -53 241 276 92 31 chr5 90727699 90727797 -108902353 + MIR3 SINE MIR 98 201 -7 2013 139 0 3 chr5 90727872 90728167 -108901983 + AluSx SINE Alu 1 294 -18 3088 208 63 13 chr5 90728275 90728978 -108901172 + L1MD2 LINE L1 5395 6132 -227 723 167 17 0 chr5 90729228 90729348 -108900802 - FLAM_C SINE Alu -7 126 5 3730 154 68 4 chr5 90729433 90729942 -108900208 + Tigger3b DNA MER2_type 1 567 -2461 2279 69 0 0 chr5 90729942 90730217 -108899933 - AluY SINE Alu -14 297 23 3730 154 68 4 chr5 90730217 90730396 -108899754 + Tigger3b DNA MER2_type 567 733 -498 7814 142 44 50 chr5 90730397 90730862 -108899288 + L1MA4 LINE L1 3769 4235 -2065 1637 161 7 21 chr5 90730862 90731141 -108899009 + AluJo SINE Alu 5 279 -33 7814 142 44 50 chr5 90731141 90732392 -108897758 + L1MA4 LINE L1 4235 5492 -808 723 174 167 0 chr5 90732392 90732530 -108897620 + FAM SINE Alu 5 165 -10 7814 142 44 50 chr5 90732530 90732636 -108897514 + L1MA4 LINE L1 5492 5597 -703 1839 141 59 0 chr5 90732636 90732906 -108897244 + AluSx SINE Alu 1 286 -26 7814 142 44 50 chr5 90732906 90733631 -108896519 + L1MA4 LINE L1 5597 6290 -10 3068 124 48 14 chr5 90733638 90734153 -108895997 + Tigger3b DNA MER2_type 700 1232 0 1683 168 17 31 chr5 90734443 90734735 -108895415 + AluJb SINE Alu 11 298 -14 471 280 55 95 chr5 90734820 90735220 -108894930 + MLT1I LTR MaLR 19 402 -7 2131 123 0 0 chr5 90735506 90735837 -108894313 - AluSq SINE Alu 0 331 1 37 0 0 0 chr5 90735862 90735899 -108894251 + AT_rich Low_complexity Low_complexity 1 37 0 749 172 8 0 chr5 90735899 90736021 -108894129 - FLAM_C SINE Alu -20 123 1 1209 274 77 22 chr5 90736066 90736467 -108893683 - LTR16A LTR ERVL -13 437 15 225 178 0 0 chr5 90736525 90736570 -108893580 + (CACCAT)n Simple_repeat Simple_repeat 5 49 0 325 190 10 90 chr5 90736570 90736670 -108893480 - MIR SINE MIR -11 251 160 535 252 0 53 chr5 90737434 90737565 -108892585 + MLT1F LTR MaLR 1 124 -418 1378 163 38 13 chr5 90737573 90737812 -108892338 + MLT1F LTR MaLR 298 542 0 1941 140 7 0 chr5 90737904 90738190 -108891960 - AluSx SINE Alu -24 288 1 503 355 51 68 chr5 90738403 90738603 -108891547 + L2 LINE L2 2544 2746 -526 1739 160 36 7 chr5 90738603 90738884 -108891266 + AluJo SINE Alu 1 289 -23 503 355 51 68 chr5 90738884 90739428 -108890722 + L2 LINE L2 2746 3272 0 547 272 109 15 chr5 90739472 90739674 -108890476 + MIR SINE MIR 31 251 -11 268 152 22 0 chr5 90741792 90741838 -108888312 - L1ME LINE L1 -600 5570 5524 794 273 21 11 chr5 90741857 90742226 -108887924 - L1ME LINE L1 -715 5455 5080 25211 103 12 9 chr5 90742236 90745943 -108884207 + L1P LINE L1 11 3726 -2420 * 36861 58 3 1 chr5 90745938 90750625 -108879525 - L1P LINE L1 -1448 4698 3 268 314 13 72 chr5 90751067 90751220 -108878930 + L2 LINE L2 2558 2701 -613 963 193 0 6 chr5 90751237 90751408 -108878742 + FAM SINE Alu 1 41 -8 1655 248 75 38 chr5 90751427 90751965 -108878185 + L2 LINE L2 2733 3286 -27 291 54 0 0 chr5 90751994 90752031 -108878119 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 243 273 104 0 chr5 90752309 90752386 -108877764 - MIR3 SINE MIR -32 176 92 1606 112 61 91 chr5 90752812 90753020 -108877130 + MER4B LTR ERV1 289 485 -125 2192 117 0 3 chr5 90753020 90753320 -108876830 + AluSx SINE Alu 1 299 -13 1606 112 61 91 chr5 90753320 90753441 -108876709 + MER4B LTR ERV1 485 608 -2 4390 146 26 50 chr5 90753443 90754936 -108875214 - L1MA5A LINE L1 -211 6086 4630 724 172 8 22 chr5 90754937 90755071 -108875079 + FLAM_C SINE Alu 2 133 0 186 167 0 0 chr5 90755071 90755107 -108875043 + GA-rich Low_complexity Low_complexity 1 36 0 322 197 127 0 chr5 90755125 90755196 -108874954 - L1MA5A LINE L1 -1508 4638 4559 983 178 6 0 chr5 90755223 90755403 -108874747 - AluJb SINE Alu 0 309 129 1870 149 36 13 chr5 90755406 90755708 -108874442 - AluJb SINE Alu -2 310 2 24 0 0 0 chr5 90758009 90758033 -108872117 + AT_rich Low_complexity Low_complexity 1 24 0 481 274 126 26 chr5 90758183 90758373 -108871777 + MIR SINE MIR 13 221 -41 1861 152 7 3 chr5 90758472 90758775 -108871375 - AluJb SINE Alu -8 304 1 24 32 0 0 chr5 90759565 90759596 -108870554 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 90759828 90759857 -108870293 + AT_rich Low_complexity Low_complexity 1 29 0 2540 44 0 0 chr5 90759862 90760158 -108869992 + AluY SINE Alu 1 296 -15 472 224 0 17 chr5 90760602 90760718 -108869432 + MSTD LTR MaLR 1 114 -282 253 150 0 0 chr5 90760704 90760744 -108869406 + MSTD LTR MaLR 357 396 0 * 213 39 0 0 chr5 90760786 90760812 -108869338 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2306 92 10 0 chr5 90760850 90761143 -108869007 + AluSc SINE Alu 1 296 -13 21 82 0 0 chr5 90761665 90761714 -108868436 + AT_rich Low_complexity Low_complexity 1 49 0 1067 162 0 17 chr5 90761834 90762013 -108868137 - FRAM SINE Alu -6 170 1 5427 164 19 45 chr5 90762404 90762906 -108867244 - L1MA9 LINE L1 0 6312 5798 224 30 30 0 chr5 90762906 90762939 -108867211 + (TG)n Simple_repeat Simple_repeat 1 34 0 5427 164 19 45 chr5 90762939 90763431 -108866719 - L1MA9 LINE L1 -514 5798 5348 1406 203 39 4 chr5 90763431 90763712 -108866438 - AluJo SINE Alu -17 295 5 5427 164 19 45 chr5 90763712 90764201 -108865949 - L1MA9 LINE L1 -964 5348 4848 249 209 0 0 chr5 90764495 90764562 -108865588 + (CA)n Simple_repeat Simple_repeat 1 67 0 310 330 0 9 chr5 90765439 90765545 -108864605 + L1MC5 LINE L1 7809 7913 -48 787 199 0 0 chr5 90765746 90765877 -108864273 + FLAM_C SINE Alu 1 131 -2 592 229 50 75 chr5 90766497 90766737 -108863413 + L1MA9 LINE L1 6041 6274 -38 24 0 0 0 chr5 90766742 90766766 -108863384 + AT_rich Low_complexity Low_complexity 1 24 0 1059 265 105 12 chr5 90766975 90767307 -108862843 - MLT1J2 LTR MaLR -4 446 84 1506 204 0 4 chr5 90767423 90767693 -108862457 + AluJo SINE Alu 1 269 -43 490 285 110 40 chr5 90767732 90767960 -108862190 + MIR SINE MIR 8 251 -11 229 288 41 0 chr5 90767961 90768034 -108862116 + MIR SINE MIR 185 260 -2 4370 159 35 35 chr5 90768692 90769011 -108861139 - L1MD1 LINE L1 -5 6631 6313 1916 139 0 36 chr5 90769011 90769314 -108860836 + AluSx SINE Alu 1 292 -20 4370 159 35 35 chr5 90769314 90769649 -108860501 - L1MD1 LINE L1 -323 6313 5974 2666 14 0 0 chr5 90769649 90769940 -108860210 + AluY SINE Alu 15 305 -6 4370 159 35 35 chr5 90769940 90770223 -108859927 - L1MD1 LINE L1 -661 5975 5693 438 165 0 47 chr5 90770239 90770324 -108859826 - FLAM SINE Alu -14 129 49 11368 25 0 0 chr5 90770324 90771665 -108858485 - L1PA3 LINE L1 -968 5178 3838 7485 25 1 1 chr5 90771665 90772658 -108857492 + L1PA3 LINE L1 5184 6155 0 294 269 0 3 chr5 90772659 90772737 -108857413 - AluJ/FLAM SINE Alu -240 62 1 1515 216 72 89 chr5 90772741 90773449 -108856701 - L1MD1 LINE L1 -854 5686 4991 342 100 0 0 chr5 90773449 90773499 -108856651 + L1M1 LINE L1 2141 2190 -5375 285 114 0 0 chr5 90773499 90773543 -108856607 - L1M1 LINE L1 -5331 2234 2191 14637 153 22 21 chr5 90773552 90776353 -108853797 + L1M1 LINE L1 2193 5039 -2685 229 32 0 0 chr5 90776353 90776384 -108853766 - MADE1 DNA Mariner -12 68 38 14637 153 22 21 chr5 90776384 90778524 -108851626 + L1M1 LINE L1 5039 7176 -548 588 59 24 0 chr5 90778668 90778753 -108851397 + L1MA3 LINE L1 6218 6304 -1 22 0 0 0 chr5 90778754 90778776 -108851374 + AT_rich Low_complexity Low_complexity 1 22 0 3791 216 66 48 chr5 90778793 90779325 -108850825 - L1MD1 LINE L1 -1814 4726 4205 1947 148 10 7 chr5 90779325 90779635 -108850515 + AluSx SINE Alu 1 311 -1 3791 216 66 48 chr5 90779635 90780367 -108849783 - L1MD1 LINE L1 -2335 4205 3432 2180 125 0 3 chr5 90780367 90780672 -108849478 - AluSq SINE Alu -9 304 1 3791 216 66 48 chr5 90780672 90780791 -108849359 - L1MD1 LINE L1 -3108 3432 3317 * 4363 252 49 29 chr5 90780779 90781054 -108849096 - L1MD1 LINE L1 -5358 1182 914 1636 186 22 26 chr5 90781054 90781366 -108848784 + AluJo SINE Alu 1 311 -1 4363 252 49 29 chr5 90781366 90782247 -108847903 - L1MD1 LINE L1 -5626 914 2 2297 99 0 0 chr5 90782431 90782734 -108847416 - AluSg1 SINE Alu -5 304 2 24 0 0 0 chr5 90782845 90782869 -108847281 + AT_rich Low_complexity Low_complexity 1 24 0 1730 52 0 0 chr5 90784360 90784572 -108845578 - L1PA5 LINE L1 -4 6150 5939 8924 79 23 5 chr5 90785149 90786392 -108843758 - L1P LINE L1 -3311 2835 1570 6977 54 7 1 chr5 90786392 90787969 -108842181 + L1PA6 LINE L1 4581 6140 -14 2088 259 78 13 chr5 90788421 90789167 -108840983 + HAL1 LINE L1 1338 2131 -376 854 185 105 8 chr5 90789158 90789491 -108840659 - L1M4 LINE L1 -3796 2848 2484 * 4804 275 54 32 chr5 90789632 90789979 -108840171 - L1M4 LINE L1 -4480 2249 1911 2302 64 4 0 chr5 90789979 90790259 -108839891 + AluY SINE Alu 7 287 -24 4804 275 54 32 chr5 90790259 90790604 -108839546 - L1M4 LINE L1 -4818 1911 1575 2189 129 3 0 chr5 90790604 90790907 -108839243 - AluSx SINE Alu -8 304 1 4804 275 54 32 chr5 90790907 90791978 -108838172 - L1M4 LINE L1 -5154 1575 320 * 5853 183 11 11 chr5 90791975 90792458 -108837692 - L1MC1 LINE L1 0 6333 5851 1900 156 0 32 chr5 90792458 90792772 -108837378 - AluSx SINE Alu -8 304 1 5853 183 11 11 chr5 90792772 90793585 -108836565 - L1MC1 LINE L1 -482 5851 5036 490 212 38 130 chr5 90793588 90793772 -108836378 - MER21B LTR ERV1 -672 191 25 2029 148 54 39 chr5 90793803 90794234 -108835916 - MLT2B1 LTR ERVL -121 433 1 233 298 32 11 chr5 90795171 90795265 -108834885 + HAL1 LINE L1 1691 1786 -721 210 37 0 0 chr5 90795302 90795329 -108834821 + (GA)n Simple_repeat Simple_repeat 1 27 0 954 241 80 41 chr5 90795330 90795820 -108834330 + HAL1 LINE L1 1887 2395 -112 2623 187 19 60 chr5 90795923 90796132 -108834018 - L1MC3 LINE L1 0 7785 7569 1901 160 10 0 chr5 90796132 90796420 -108833730 - AluSx SINE Alu -21 291 1 2623 187 19 60 chr5 90796420 90796847 -108833303 - L1MC3 LINE L1 -216 7569 7175 24 0 0 0 chr5 90797949 90797973 -108832177 + AT_rich Low_complexity Low_complexity 1 24 0 2141 189 46 100 chr5 90798242 90798735 -108831415 - MER92B LTR ERV1 0 636 187 4694 36 0 0 chr5 90798735 90799291 -108830859 - L1PA5 LINE L1 -6 6148 5593 2141 189 46 100 chr5 90799291 90799469 -108830681 - MER92B LTR ERV1 -449 187 1 216 260 96 0 chr5 90799594 90799667 -108830483 - L2 LINE L2 -667 2647 2568 287 344 0 11 chr5 90800454 90800544 -108829606 - L2 LINE L2 -1 3271 3183 558 232 110 0 chr5 90800677 90800832 -108829318 + MER58C DNA MER1_type 44 215 0 207 0 0 0 chr5 90800931 90800954 -108829196 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 336 266 156 0 chr5 90801208 90801317 -108828833 - MIR SINE MIR -56 206 81 3397 136 25 14 chr5 90802244 90802794 -108827356 + MER41D LTR ERV1 2 557 0 204 125 0 0 chr5 90802880 90802912 -108827238 + (A)n Simple_repeat Simple_repeat 1 32 0 571 201 73 18 chr5 90802912 90803076 -108827074 - L1MC2 LINE L1 -13 6331 6159 24 0 0 0 chr5 90803321 90803345 -108826805 + AT_rich Low_complexity Low_complexity 1 24 0 323 262 12 0 chr5 90803566 90803650 -108826500 + MLT1L LTR MaLR 531 615 0 228 67 0 0 chr5 90805084 90805114 -108825036 + (CA)n Simple_repeat Simple_repeat 1 30 0 414 216 183 26 chr5 90808633 90808786 -108821364 + MER5B DNA MER1_type 1 177 -1 321 115 39 0 chr5 90809208 90809286 -108820864 + (TA)n Simple_repeat Simple_repeat 2 82 0 7770 164 32 30 chr5 90809306 90810372 -108819778 + L1MC3 LINE L1 5351 6424 -1361 2034 203 13 13 chr5 90810372 90810767 -108819383 + MSTD LTR MaLR 2 396 0 7770 164 32 30 chr5 90810767 90811258 -108818892 + L1MC3 LINE L1 6424 6912 -873 676 162 0 0 chr5 90811260 90811371 -108818779 - MSTA LTR MaLR -84 344 234 577 265 110 0 chr5 90811382 90811582 -108818568 + MARNA DNA Mariner 309 530 -56 1874 256 86 90 chr5 90811720 90812970 -108817180 - HAL1 LINE L1 0 2507 1263 436 208 217 0 chr5 90812974 90813080 -108817070 + MLT1E LTR MaLR 3 131 -462 3091 65 12 0 chr5 90813088 90813504 -108816646 + L1P LINE L1 4912 5332 -814 663 153 22 29 chr5 90813504 90813641 -108816509 + SVA Other Other 488 623 -763 272 271 0 0 chr5 90813641 90813700 -108816450 - HAL1 LINE L1 -2448 59 1 410 264 114 41 chr5 90814512 90814758 -108815392 + L2 LINE L2 3002 3265 -48 275 336 93 0 chr5 90814738 90814878 -108815272 + L2 LINE L2 2918 3070 -243 * 425 314 31 6 chr5 90814898 90815057 -108815093 - LTR67 LTR ERVL -8 549 387 210 262 0 0 chr5 90815152 90815236 -108814914 + GA-rich Low_complexity Low_complexity 2 85 0 337 281 31 31 chr5 90815259 90815355 -108814795 - LTR67 LTR ERVL -339 218 123 217 266 117 47 chr5 90815452 90815523 -108814627 + L2 LINE L2 3086 3151 -162 23 0 0 0 chr5 90815523 90815546 -108814604 + AT_rich Low_complexity Low_complexity 1 23 0 217 266 117 47 chr5 90815546 90815580 -108814570 + L2 LINE L2 3151 3222 -91 939 202 41 53 chr5 90815580 90815789 -108814361 - MLT1E2 LTR MaLR -2 503 293 2224 123 0 16 chr5 90815789 90816106 -108814044 - AluSx SINE Alu 0 312 1 939 202 41 53 chr5 90816106 90816255 -108813895 - MLT1E2 LTR MaLR -212 293 144 1879 162 0 0 chr5 90816255 90816602 -108813548 - AluSx SINE Alu 0 347 1 567 209 104 9 chr5 90816605 90816720 -108813430 - FLAM_A SINE Alu -7 126 1 939 202 41 53 chr5 90816720 90816809 -108813341 - MLT1E2 LTR MaLR -363 142 2 224 256 146 0 chr5 90816813 90816895 -108813255 + L2 LINE L2 3219 3312 -1 2701 65 12 0 chr5 90817024 90817364 -108812786 + LTR14A LTR ERVK 1 344 0 1861 155 7 13 chr5 90817803 90818113 -108812037 + AluJb SINE Alu 1 308 -4 402 125 16 0 chr5 90920178 90920242 -108709908 - AluS SINE Alu -218 85 21 1716 70 0 24 chr5 90920359 90920572 -108709578 + AluY SINE Alu 82 289 -22 363 279 99 19 chr5 90921096 90921257 -108708893 - L2 LINE L2 -67 3246 3073 276 220 0 0 chr5 90921553 90921612 -108708538 + MLT1A2 LTR MaLR 308 366 -8 270 184 171 0 chr5 90923645 90923721 -108706429 + L2 LINE L2 3217 3305 -8 189 107 0 0 chr5 90924444 90924472 -108705678 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 5454 127 19 44 chr5 90925704 90925904 -108704246 + Tigger1 DNA MER2_type 1 204 -2214 2386 95 0 13 chr5 90925904 90926208 -108703942 + AluSx SINE Alu 1 300 -12 5454 127 19 44 chr5 90926208 90926383 -108703767 + Tigger1 DNA MER2_type 204 382 -2036 306 0 0 0 chr5 90926383 90926417 -108703733 + (TC)n Simple_repeat Simple_repeat 1 34 0 5454 127 19 44 chr5 90926417 90926912 -108703238 + Tigger1 DNA MER2_type 382 848 -1570 2117 103 10 33 chr5 90926912 90927214 -108702936 + AluSg SINE Alu 1 295 -15 5454 127 19 44 chr5 90927214 90927299 -108702851 + Tigger1 DNA MER2_type 848 934 -1484 617 158 9 0 chr5 90927406 90927520 -108702630 + AluSg/x SINE Alu 191 305 -7 791 268 160 14 chr5 90927677 90928102 -108702048 + L2 LINE L2 2827 3313 0 2264 106 14 0 chr5 90928652 90928944 -108701206 + AluSx SINE Alu 3 298 -14 295 269 39 0 chr5 90928961 90929074 -108701076 - MLT1J LTR MaLR -306 179 22 546 262 133 29 chr5 90929263 90929473 -108700677 + MIR SINE MIR 19 250 -12 2271 125 23 0 chr5 90929614 90929919 -108700231 - AluSx SINE Alu 0 312 1 276 315 57 26 chr5 90930007 90930197 -108699953 - MIR SINE MIR -19 189 3 327 85 0 0 chr5 90930332 90930379 -108699771 + (TCC)n Simple_repeat Simple_repeat 3 49 0 508 314 98 31 chr5 90930993 90931052 -108699098 - L2 LINE L2 -566 2748 2694 2278 108 3 0 chr5 90931052 90931347 -108698803 + AluSx SINE Alu 1 296 -16 508 314 98 31 chr5 90931347 90931644 -108698506 - L2 LINE L2 -620 2694 2368 270 270 90 0 chr5 90932081 90932170 -108697980 - MER91A DNA MER1_type 0 196 100 195 42 0 0 chr5 90932359 90932383 -108697767 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2138 128 0 0 chr5 90932385 90932666 -108697484 - AluSx SINE Alu -31 281 1 310 295 189 39 chr5 90932862 90933249 -108696901 - L2 LINE L2 -1253 2061 1617 427 293 179 0 chr5 90933425 90933565 -108696585 - MER5A DNA MER1_type 0 189 25 694 268 111 41 chr5 90933571 90933959 -108696191 + HAL1 LINE L1 1219 1633 -874 995 209 8 51 chr5 90935094 90935328 -108694822 - MER58A DNA MER1_type 0 224 1 281 257 204 9 chr5 90935447 90935560 -108694590 - MIR SINE MIR -2 260 126 1961 181 34 28 chr5 90937496 90938045 -108692105 + MLT2A2 LTR ERVL 1 554 0 1466 225 10 6 chr5 90938351 90938662 -108691488 + AluJo SINE Alu 1 312 0 200 248 89 81 chr5 90939653 90939813 -108690337 + MIR SINE MIR 28 190 -72 629 239 109 30 chr5 90940120 90940321 -108689829 - MIR SINE MIR -4 258 42 2205 106 7 13 chr5 90940335 90940638 -108689512 - AluSx SINE Alu -11 301 1 1038 201 42 17 chr5 90941618 90941857 -108688293 - ORSL DNA AcHobo 0 275 31 189 0 0 0 chr5 90942480 90942501 -108687649 + (CCG)n Simple_repeat Simple_repeat 2 22 0 203 184 0 20 chr5 90943830 90943879 -108686271 + G-rich Low_complexity Low_complexity 3 50 0 489 294 14 7 chr5 90945106 90945252 -108684898 - MIR3 SINE MIR -10 198 52 610 291 37 33 chr5 90946360 90946615 -108683535 + MIR SINE MIR 4 262 0 328 267 121 18 chr5 90946749 90946914 -108683236 + MER5A DNA MER1_type 8 189 0 248 300 33 0 chr5 90947936 90947996 -108682154 - L3 LINE CR1 -95 1482 1421 200 67 67 0 chr5 90948669 90948699 -108681451 + MIR SINE MIR 114 145 -63 1728 110 0 0 chr5 90948725 90948952 -108681198 + AluSq SINE Alu 1 227 -86 708 181 27 4 chr5 90949421 90949691 -108680459 + CT-rich Low_complexity Low_complexity 1 276 0 222 211 0 0 chr5 90949723 90949761 -108680389 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 920 233 126 34 chr5 90949832 90950358 -108679792 + MLT1H1 LTR MaLR 1 552 -3 243 311 183 52 chr5 90950361 90950689 -108679461 - L2 LINE L2 -98 3174 2804 185 222 0 0 chr5 90950936 90950972 -108679178 + MIR SINE MIR 83 118 -90 548 264 25 41 chr5 90951488 90951685 -108678465 + MIR SINE MIR 69 262 0 297 219 16 0 chr5 90952726 90952790 -108677360 - L2 LINE L2 -1 3312 3248 696 291 105 16 chr5 90952802 90953060 -108677090 - MLT1L LTR MaLR -6 609 329 613 265 35 48 chr5 90953339 90953415 -108676735 + LTR33 LTR ERVL 2 77 -444 2133 110 23 7 chr5 90953415 90953715 -108676435 - AluSx SINE Alu -7 305 1 613 265 35 48 chr5 90953715 90953868 -108676282 + LTR33 LTR ERVL 77 228 -293 401 318 58 6 chr5 90954617 90954790 -108675360 - MIR SINE MIR -76 186 5 464 0 18 0 chr5 90956389 90956445 -108673705 + (CAAAG)n Simple_repeat Simple_repeat 1 57 0 182 258 50 121 chr5 90956618 90956800 -108673350 + L2 LINE L2 2924 3092 -180 382 298 30 24 chr5 90956888 90957056 -108673094 - MIR SINE MIR -15 247 79 320 225 14 0 chr5 90957071 90957142 -108673008 + MER63 DNA MER1_type 675 746 -90 311 261 23 11 chr5 90957129 90957217 -108672933 + MER63 DNA MER1_type 957 1045 -15 * 247 283 50 10 chr5 90957263 90957362 -108672788 + L2 LINE L2 3211 3313 0 216 154 0 0 chr5 90957783 90957835 -108672315 + (TG)n Simple_repeat Simple_repeat 2 53 0 706 197 0 36 chr5 90958524 90958661 -108671489 + MER45A DNA AcHobo 46 177 -1 226 259 17 0 chr5 90958662 90958720 -108671430 - MER5A DNA MER1_type -35 154 96 513 210 0 0 chr5 90959040 90959140 -108671010 + FRAM SINE Alu 4 103 -73 230 336 0 25 chr5 90959697 90959819 -108670331 + L1P LINE L1 4901 5019 -1127 311 368 42 45 chr5 90959821 90960201 -108669949 + L1ME LINE L1 5016 5394 -752 353 319 64 28 chr5 90960256 90960397 -108669753 - L1MC/D LINE L1 -1994 5814 5669 313 276 54 69 chr5 90960553 90960611 -108669539 - MIR SINE MIR 0 262 205 2061 112 42 7 chr5 90960611 90960896 -108669254 - AluSx SINE Alu -17 295 1 313 276 54 69 chr5 90960896 90961040 -108669110 - MIR SINE MIR -57 205 63 1418 150 122 12 chr5 90961957 90962254 -108667896 - AluSx SINE Alu 0 325 1 480 271 38 33 chr5 90962289 90962499 -108667651 + L1ME LINE L1 5566 5776 -345 9028 125 14 25 chr5 90962805 90963958 -108666192 + Tigger1 DNA MER2_type 947 2082 -336 2629 65 3 0 chr5 90963958 90964266 -108665884 + AluSp SINE Alu 1 309 -4 9028 125 14 25 chr5 90964266 90964597 -108665553 + Tigger1 DNA MER2_type 2082 2415 -3 257 380 69 9 chr5 90964647 90964863 -108665287 - MIR SINE MIR -2 260 32 654 262 49 27 chr5 90965247 90965430 -108664720 - MIR SINE MIR -33 229 43 1637 200 12 52 chr5 90965493 90965893 -108664257 - MLT1B LTR MaLR -6 384 1 193 261 9 9 chr5 90967081 90967192 -108662958 + (TG)n Simple_repeat Simple_repeat 2 112 0 328 230 5 43 chr5 90967207 90967394 -108662756 + (TG)n Simple_repeat Simple_repeat 1 180 0 182 255 11 0 chr5 90967420 90967514 -108662636 + (TG)n Simple_repeat Simple_repeat 2 96 0 336 335 0 0 chr5 90967545 90967777 -108662373 + (TG)n Simple_repeat Simple_repeat 1 232 0 351 303 0 43 chr5 90967876 90968061 -108662089 + (TATG)n Simple_repeat Simple_repeat 4 180 0 * 438 328 0 16 chr5 90968044 90968284 -108661866 + (TG)n Simple_repeat Simple_repeat 1 236 0 984 205 19 0 chr5 90968431 90968636 -108661514 - LTR16A1 LTR ERVL -2 455 247 326 303 11 39 chr5 90968945 90969123 -108661027 + (TATG)n Simple_repeat Simple_repeat 4 176 0 2181 164 11 11 chr5 90969639 90969993 -108660157 - MLT1A1 LTR MaLR -2 363 10 188 276 26 95 chr5 90970328 90970444 -108659706 + MIR SINE MIR 152 259 -3 217 254 32 0 chr5 90970989 90971052 -108659098 + GA-rich Low_complexity Low_complexity 6 70 0 360 220 57 144 chr5 90971473 90971737 -108658413 - L1ME4a LINE L1 -23 6098 5858 280 300 94 29 chr5 90972390 90972560 -108657590 - MIR SINE MIR -24 238 58 281 350 24 8 chr5 90973762 90973885 -108656265 + L1ME LINE L1 5558 5682 -439 2002 183 35 87 chr5 90974073 90974555 -108655595 - LTR32 LTR ERVL 0 471 15 299 235 15 0 chr5 90974554 90974622 -108655528 - MER3 DNA MER1_type -136 73 5 * 341 345 0 14 chr5 90974635 90974777 -108655373 + L2 LINE L2 2656 2795 -519 199 269 0 0 chr5 90974848 90974900 -108655250 + L2 LINE L2 2926 2977 -336 521 344 42 0 chr5 90975351 90975540 -108654610 + L2 LINE L2 3075 3271 -1 249 283 80 116 chr5 90976357 90976608 -108653542 - L2 LINE L2 -31 3241 3000 2285 151 70 7 chr5 90976623 90977026 -108653124 - MSTA LTR MaLR 0 428 1 8316 166 7 12 chr5 90977026 90978423 -108651727 - MSTA-int LTR MaLR 0 1580 181 785 238 21 143 chr5 90978509 90978930 -108651220 + L2 LINE L2 2943 3312 -1 226 259 35 35 chr5 90979573 90979658 -108650492 - MIR SINE MIR -111 151 67 329 316 44 20 chr5 90979694 90979944 -108650206 + L2 LINE L2 1720 1975 -1339 360 250 10 19 chr5 90979969 90980073 -108650077 + L2 LINE L2 2971 3073 -199 324 337 23 0 chr5 90980073 90980159 -108649991 + L2 LINE L2 3225 3312 -1 232 414 0 0 chr5 90980221 90980320 -108649830 + L2 LINE L2 3139 3237 -35 240 267 17 0 chr5 90980345 90980405 -108649745 - MIR SINE MIR -190 72 12 746 187 161 0 chr5 90980458 90980613 -108649537 - MER5A DNA MER1_type -6 183 4 228 164 0 49 chr5 90981060 90981121 -108649029 + (CAGAGA)n Simple_repeat Simple_repeat 4 61 0 657 281 12 6 chr5 90981530 90981697 -108648453 - MIR SINE MIR -26 236 69 856 231 205 32 chr5 90981732 90981775 -108648375 + MLT1H LTR MaLR 109 143 -406 604 36 12 12 chr5 90981775 90981859 -108648291 + (CAATA)n Simple_repeat Simple_repeat 1 84 0 856 231 205 32 chr5 90981859 90982191 -108647959 + MLT1H LTR MaLR 143 549 0 387 278 178 18 chr5 90982391 90982752 -108647398 + L2 LINE L2 2565 3011 -261 1003 177 6 142 chr5 90982783 90983094 -108647056 - L1ME2 LINE L1 -11 6153 5885 1534 226 77 25 chr5 90983457 90983936 -108646214 + MLT1D LTR MaLR 1 504 -1 2486 138 39 2 chr5 90984208 90984621 -108645529 - MSTA LTR MaLR 0 428 1 342 0 0 0 chr5 90984906 90984944 -108645206 + (CA)n Simple_repeat Simple_repeat 1 38 0 213 39 0 0 chr5 90984971 90984997 -108645153 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 1697 114 0 0 chr5 90985045 90985282 -108644868 - AluSx SINE Alu -75 237 1 186 43 0 0 chr5 90985716 90985739 -108644411 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 195 345 138 0 chr5 90985742 90985858 -108644292 - L2 LINE L2 -15 3257 3126 615 236 107 14 chr5 90986418 90986634 -108643516 + MER106A DNA MER1_type 1 236 0 1362 197 84 38 chr5 90986907 90987278 -108642872 + MLT1C LTR MaLR 73 460 -7 2323 88 0 0 chr5 90988176 90988484 -108641666 + AluY SINE Alu 2 309 -2 216 97 0 0 chr5 90988899 90988930 -108641220 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 1804 244 66 45 chr5 90989576 90990155 -108639995 - MLT1E LTR MaLR -2 591 1 224 217 100 17 chr5 90990326 90990386 -108639764 - L2 LINE L2 -181 3091 3027 849 278 101 6 chr5 90990666 90991011 -108639139 - MLT1J2 LTR MaLR 0 450 73 798 255 0 32 chr5 90991756 90991972 -108638178 + MER3 DNA MER1_type 1 209 0 1031 162 16 16 chr5 90992146 90992337 -108637813 + AluSg/x SINE Alu 121 311 -1 1812 137 0 3 chr5 90992347 90992631 -108637519 + AluJb SINE Alu 1 283 -29 366 267 9 9 chr5 90992653 90992758 -108637392 - MER5A DNA MER1_type -81 108 4 604 300 22 6 chr5 90993253 90993433 -108636717 - MIR SINE MIR -38 224 42 201 74 0 0 chr5 90993807 90993834 -108636316 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 243 268 331 16 chr5 90994059 90994186 -108635964 + MLT1K LTR MaLR 258 424 -164 279 268 85 0 chr5 90995676 90995758 -108634392 + MIR SINE MIR 57 145 -117 208 146 0 104 chr5 90996311 90996359 -108633791 - L3 LINE CR1 -3 1574 1532 311 257 174 0 chr5 90997293 90997402 -108632748 - MER94 DNA DNA -3 131 4 304 223 76 83 chr5 90997779 90997936 -108632214 + MER117 DNA MER1_type 1 156 -41 877 108 0 0 chr5 90998439 90998568 -108631582 + L1PA6 LINE L1 6026 6154 0 2112 95 3 25 chr5 90999131 90999448 -108630702 + AluSg SINE Alu 1 310 0 2261 97 0 3 chr5 90999448 90999746 -108630404 + AluSg SINE Alu 1 297 -13 988 250 105 43 chr5 91000284 91000676 -108629474 - LTR16C LTR ERVL -1 490 75 1571 138 0 52 chr5 91001835 91002103 -108628047 - AluSx SINE Alu -58 254 1 1859 235 32 14 chr5 91002103 91002605 -108627545 - L1ME LINE L1 -361 5803 5293 422 152 45 20 chr5 91002679 91002925 -108627225 + (CA)n Simple_repeat Simple_repeat 1 252 0 335 284 37 9 chr5 91003224 91003333 -108626817 + L2 LINE L2 3161 3272 0 * 398 308 174 38 chr5 91003315 91003763 -108626387 - L2 LINE L2 -1 3312 2804 417 260 101 39 chr5 91003770 91003978 -108626172 + MER112 DNA MER1_type 8 228 -32 393 158 79 13 chr5 91003993 91004069 -108626081 - L2 LINE L2 -528 2786 2706 785 250 103 36 chr5 91004069 91004485 -108625665 - L1MC5 LINE L1 -10 7951 7508 1670 223 59 24 chr5 91004535 91004575 -108625575 - L1ME2 LINE L1 -9 6950 6913 1403 154 116 0 chr5 91004575 91004842 -108625308 + AluJo SINE Alu 1 298 -14 1670 223 59 24 chr5 91004842 91005295 -108624855 - L1ME2 LINE L1 -46 6913 6440 * 3754 281 87 43 chr5 91005293 91005839 -108624311 - L1ME2 LINE L1 -1436 5505 4984 1961 125 0 0 chr5 91005839 91006140 -108624010 - AluSc SINE Alu 0 301 1 3754 281 87 43 chr5 91006140 91006488 -108623662 - L1ME2 LINE L1 -1957 4984 4653 2047 113 0 0 chr5 91006488 91006823 -108623327 + AluSx SINE Alu 1 335 0 3754 281 87 43 chr5 91006823 91007642 -108622508 - L1ME2 LINE L1 -2288 4653 3714 4824 164 29 36 chr5 91007642 91007796 -108622354 + L1MA4 LINE L1 5141 5295 -1005 198 0 0 0 chr5 91007796 91007818 -108622332 + (GAAAA)n Simple_repeat Simple_repeat 1 22 0 4824 164 29 36 chr5 91007818 91008828 -108621322 + L1MA4 LINE L1 5295 6293 -7 669 247 59 16 chr5 91008859 91009114 -108621036 - L1ME2 LINE L1 -3215 3726 3461 633 157 0 64 chr5 91009219 91009296 -108620854 + L1PB3 LINE L1 6023 6089 -65 2130 101 0 0 chr5 91009296 91009584 -108620566 - AluSg SINE Alu -22 288 1 633 157 0 64 chr5 91009584 91009646 -108620504 + L1PB3 LINE L1 6089 6153 -1 2418 277 64 59 chr5 91009660 91010698 -108619452 - L1ME2 LINE L1 -4047 3075 1814 1851 160 6 13 chr5 91010698 91011011 -108619139 - AluSx SINE Alu -1 311 1 2418 277 64 59 chr5 91011011 91011563 -108618587 - L1ME2 LINE L1 -5308 1814 1266 311 89 18 0 chr5 91011607 91011663 -108618487 + (TATAA)n Simple_repeat Simple_repeat 1 57 0 263 99 64 47 chr5 91011712 91011884 -108618266 + (TA)n Simple_repeat Simple_repeat 1 175 0 228 302 81 0 chr5 91011948 91012034 -108618116 - L1ME2 LINE L1 -5202 1221 1129 1864 103 0 11 chr5 91012373 91012645 -108617505 + AluSc SINE Alu 35 303 -6 270 246 49 82 chr5 91012756 91012878 -108617272 - L1ME2 LINE L1 -6278 145 28 263 286 14 0 chr5 91013196 91013266 -108616884 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 204 193 0 140 chr5 91013359 91013416 -108616734 + L2 LINE L2 3265 3313 0 343 244 35 0 chr5 91013959 91014045 -108616105 + MIR SINE MIR 103 191 -71 2023 143 157 5 chr5 91014581 91014951 -108615199 - MSTA LTR MaLR -2 426 1 207 228 35 18 chr5 91015402 91015459 -108614691 + GA-rich Low_complexity Low_complexity 1 58 0 301 335 132 25 chr5 91016576 91016773 -108613377 + MIR SINE MIR 21 238 -24 372 379 23 5 chr5 91016773 91016992 -108613158 + L1M4 LINE L1 3232 3454 -2692 519 212 18 0 chr5 91017001 91017114 -108613036 - LTR33A LTR ERVL -3 520 406 756 277 70 30 chr5 91017180 91017451 -108612699 - LTR33A LTR ERVL -239 284 3 324 340 38 22 chr5 91017491 91017676 -108612474 + L1M4 LINE L1 3545 3732 -2414 855 193 0 0 chr5 91017677 91017827 -108612323 + FRAM SINE Alu 1 150 -26 436 308 10 5 chr5 91017841 91018039 -108612111 + L1M4 LINE L1 3758 3956 -2190 1114 213 72 61 chr5 91018189 91018550 -108611600 + MLT1A1 LTR MaLR 1 365 0 736 328 71 21 chr5 91018648 91019489 -108610661 + L1M4 LINE L1 3971 4853 -1293 * 972 186 0 70 chr5 91019472 91019714 -108610436 - L1MA7 LINE L1 -186 6105 5881 1663 104 0 0 chr5 91019772 91019992 -108610158 - AluSc SINE Alu -89 220 1 1868 129 28 40 chr5 91020011 91020337 -108609813 - MER47A DNA MER2_type 0 366 45 365 254 87 24 chr5 91020570 91020696 -108609454 - HERV16 LTR ERVL -4848 148 15 809 187 55 39 chr5 91020723 91020868 -108609282 + MER5A DNA MER1_type 2 152 -37 1583 188 3 16 chr5 91020868 91021171 -108608979 - AluJo SINE Alu -11 301 3 809 187 55 39 chr5 91021171 91021207 -108608943 + MER5A DNA MER1_type 152 186 -3 1265 250 40 56 chr5 91021210 91021654 -108608496 - LTR16A1 LTR ERVL -16 441 5 230 258 124 21 chr5 91021795 91021892 -108608258 + MIR SINE MIR 110 216 -46 428 322 68 17 chr5 91021986 91022163 -108607987 - L1ME LINE L1 -531 5639 5454 343 351 35 28 chr5 91022170 91022465 -108607685 + L1ME3A LINE L1 5665 5962 -208 2172 116 3 0 chr5 91022656 91022959 -108607191 + AluSx SINE Alu 1 304 -8 23 33 0 0 chr5 91023016 91023046 -108607104 + AT_rich Low_complexity Low_complexity 1 30 0 186 382 116 28 chr5 91023120 91023481 -108606669 - L2 LINE L2 -50 3222 2830 786 174 76 17 chr5 91023786 91023958 -108606192 - MER5A DNA MER1_type -1 188 7 221 332 230 28 chr5 91024343 91024560 -108605590 - L2 LINE L2 -18 3254 2994 477 342 70 0 chr5 91025651 91025894 -108604256 - MIR SINE MIR -1 261 2 330 235 24 12 chr5 91025969 91026054 -108604096 + MIR SINE MIR 60 145 -117 2292 42 0 14 chr5 91026059 91026374 -108603776 - AluY SINE Alu 0 311 1 531 186 179 26 chr5 91026764 91026920 -108603230 - MER104 DNA MER2_type 0 180 1 361 229 0 19 chr5 91026920 91027025 -108603125 - MIR SINE MIR -2 260 158 785 236 0 22 chr5 91028149 91028197 -108601953 - MER45A DNA AcHobo -1403 178 130 2216 122 0 0 chr5 91028197 91028508 -108601642 + AluSx SINE Alu 2 312 0 785 236 0 22 chr5 91028508 91028641 -108601509 - MER45A DNA AcHobo -1451 130 1 210 318 0 0 chr5 91028648 91028714 -108601436 + MIR SINE MIR 84 149 -59 410 303 8 16 chr5 91029010 91029132 -108601018 + MIR SINE MIR 25 145 -117 392 286 191 0 chr5 91029411 91029558 -108600592 + MER5A DNA MER1_type 14 188 -1 1594 140 58 38 chr5 91029637 91029929 -108600221 - AluSx SINE Alu -14 298 1 570 228 47 13 chr5 91030803 91030952 -108599198 + MIR SINE MIR 81 234 -28 182 333 27 75 chr5 91031036 91031183 -108598967 - L2 LINE L2 -213 3059 2920 2148 225 81 56 chr5 91032144 91033077 -108597073 - L1ME LINE L1 -4817 1263 297 4469 178 60 18 chr5 91033116 91033925 -108596225 - L1MB5 LINE L1 -7 6167 5394 1826 169 0 0 chr5 91033925 91034215 -108595935 - AluJb SINE Alu -10 302 13 4469 178 60 18 chr5 91034215 91034248 -108595902 - L1MB5 LINE L1 -780 5394 5364 207 0 0 0 chr5 91034248 91034271 -108595879 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4469 178 60 18 chr5 91034271 91034786 -108595364 - L1MB5 LINE L1 -810 5364 4749 657 299 19 42 chr5 91034793 91034955 -108595195 - L1ME LINE L1 -5809 261 106 2211 125 0 0 chr5 91034955 91035259 -108594891 - AluSx SINE Alu -8 304 1 657 299 19 42 chr5 91035259 91035357 -108594793 - L1ME LINE L1 -5964 106 7 241 386 57 0 chr5 91036687 91036775 -108593375 - L3b LINE CR1 -26 1557 1465 353 143 0 197 chr5 91036800 91037023 -108593127 + (TCCCC)n Simple_repeat Simple_repeat 1 179 0 241 208 0 0 chr5 91037116 91037164 -108592986 - L2 LINE L2 -1 3271 3224 332 279 7 0 chr5 91038075 91038370 -108591780 + (TG)n Simple_repeat Simple_repeat 1 297 0 393 351 12 12 chr5 91038793 91038961 -108591189 + MIR3 SINE MIR 34 201 -7 180 244 0 22 chr5 91039070 91039115 -108591035 - MIR SINE MIR -8 254 211 896 199 23 0 chr5 91039147 91039318 -108590832 - L1PA16 LINE L1 -1 6165 5991 342 175 0 0 chr5 91039783 91039863 -108590287 + C-rich Low_complexity Low_complexity 1 80 0 279 91 0 0 chr5 91040169 91040213 -108589937 - L1PA16 LINE L1 -182 5984 5941 259 331 51 46 chr5 91040366 91040810 -108589340 - L2 LINE L2 -172 3100 2649 215 253 221 0 chr5 91041656 91041751 -108588399 + MIR SINE MIR 123 238 -24 2081 103 0 0 chr5 91041765 91042083 -108588067 - AluSg SINE Alu 0 318 1 202 205 0 0 chr5 91043483 91043522 -108586628 + GA-rich Low_complexity Low_complexity 2 40 0 321 223 22 3 chr5 91043856 91044102 -108586048 + (CA)n Simple_repeat Simple_repeat 1 250 0 1242 274 239 20 chr5 91045044 91045861 -108584289 + L2 LINE L2 1637 2632 -682 2667 236 16 21 chr5 91045883 91045977 -108584173 + L1MC3 LINE L1 7107 7200 -585 2272 94 0 0 chr5 91045977 91046274 -108583876 + AluSq SINE Alu 1 297 -16 2667 236 16 21 chr5 91046274 91046849 -108583301 + L1MC3 LINE L1 7200 7773 -12 306 308 103 0 chr5 91046876 91046993 -108583157 + L2 LINE L2 2705 2833 -481 263 345 0 34 chr5 91047226 91047345 -108582805 + L2 LINE L2 3199 3313 0 270 342 124 25 chr5 91048040 91048242 -108581908 + MIR SINE MIR 20 241 -21 272 363 63 44 chr5 91048875 91049145 -108581005 - L2 LINE L2 -3 3269 2995 517 271 88 6 chr5 91050905 91051086 -108579064 + MIR SINE MIR 35 230 -32 461 188 28 3 chr5 91051542 91051695 -108578455 + MER20 DNA MER1_type 3 208 -11 1923 133 7 0 chr5 91051695 91051995 -108578155 + AluSx SINE Alu 1 302 0 372 261 27 18 chr5 91052472 91052583 -108577567 + MIR SINE MIR 18 129 -79 1211 226 120 77 chr5 91052610 91052676 -108577474 - MLT1C LTR MaLR 0 467 405 2211 100 0 0 chr5 91052676 91052976 -108577174 + AluSx SINE Alu 1 300 -12 1211 226 120 77 chr5 91052976 91053352 -108576798 - MLT1C LTR MaLR -62 405 6 2389 77 0 0 chr5 91053400 91053697 -108576453 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr5 91053697 91053718 -108576432 + AT_rich Low_complexity Low_complexity 1 21 0 184 240 14 48 chr5 91055065 91055157 -108574993 + CT-rich Low_complexity Low_complexity 2 89 -53 2127 102 6 16 chr5 91055157 91055470 -108574680 - AluSx SINE Alu -1 311 2 184 240 14 48 chr5 91055470 91055523 -108574627 + CT-rich Low_complexity Low_complexity 89 142 0 236 351 45 8 chr5 91055816 91055950 -108574200 - MIR3 SINE MIR -50 158 20 317 373 16 0 chr5 91056649 91056775 -108573375 + MIR SINE MIR 62 189 -73 2522 56 0 0 chr5 91056776 91057081 -108573069 + AluY SINE Alu 1 305 -6 266 302 99 0 chr5 91057304 91057409 -108572741 - MIR SINE MIR -61 147 33 215 171 0 0 chr5 91058274 91058315 -108571835 - MIR SINE MIR -118 144 104 203 86 0 29 chr5 91059482 91059517 -108570633 + (TCC)n Simple_repeat Simple_repeat 2 35 0 384 336 7 34 chr5 91059568 91059714 -108570436 - L2 LINE L2 -1 3312 3171 479 189 0 38 chr5 91059770 91059955 -108570195 + (TG)n Simple_repeat Simple_repeat 1 178 0 279 228 19 19 chr5 91059967 91060125 -108570025 + (TG)n Simple_repeat Simple_repeat 2 159 0 198 103 0 0 chr5 91060214 91060243 -108569907 + (TC)n Simple_repeat Simple_repeat 2 30 0 465 333 47 0 chr5 91060654 91060846 -108569304 + MIR SINE MIR 48 248 -14 441 234 0 138 chr5 91063051 91063269 -108566881 - MER53 DNA DNA -1 188 1 854 169 13 7 chr5 91063328 91063482 -108566668 - LTR32 LTR ERVL 0 471 317 2119 95 7 0 chr5 91063503 91063817 -108566333 + AluSq SINE Alu 1 316 0 1646 187 33 3 chr5 91063856 91064156 -108565994 - LTR32 LTR ERVL -119 352 44 385 273 10 0 chr5 91064801 91064900 -108565250 - MER113 DNA MER1_type? -109 412 313 340 288 34 17 chr5 91065148 91065266 -108564884 - MIR SINE MIR -114 148 29 211 308 49 56 chr5 91065680 91065823 -108564327 + MIR SINE MIR 3 144 -118 689 146 146 122 chr5 91065961 91066166 -108563984 - MER20 DNA MER1_type -6 213 4 787 192 0 117 chr5 91066177 91066304 -108563846 - MER5A DNA MER1_type 0 189 95 2138 92 3 46 chr5 91066304 91066630 -108563520 - AluSp SINE Alu -1 312 1 787 192 0 117 chr5 91066630 91066716 -108563434 - MER5A DNA MER1_type -94 95 1 348 308 192 0 chr5 91067662 91067834 -108562316 - MIR SINE MIR -35 227 23 274 267 0 67 chr5 91067837 91067942 -108562208 + MIR SINE MIR 119 216 -46 299 300 20 10 chr5 91068537 91068637 -108561513 - MIR SINE MIR -6 256 156 402 302 50 7 chr5 91068838 91068977 -108561173 - MIR SINE MIR -116 146 2 278 308 22 0 chr5 91069215 91069306 -108560844 + MER5A DNA MER1_type 68 160 -29 492 169 102 17 chr5 91069451 91069569 -108560581 + MIR SINE MIR 4 131 -131 418 325 12 25 chr5 91069943 91070103 -108560047 - MIR3 SINE MIR -22 186 29 333 259 60 78 chr5 91070812 91070928 -108559222 - MIR SINE MIR -66 142 29 565 345 17 53 chr5 91071438 91071795 -108558355 - L2 LINE L2 -52 3220 2877 486 261 15 23 chr5 91073410 91073498 -108556652 - MER45 DNA AcHobo -2 1579 1491 797 182 87 65 chr5 91073498 91073541 -108556609 + MER46A DNA MER2_type 1 42 -2689 1412 145 83 47 chr5 91073541 91073817 -108556333 + AluJb SINE Alu 2 287 -25 797 182 87 65 chr5 91073817 91074004 -108556146 + MER46A DNA MER2_type 42 236 0 486 261 15 23 chr5 91074004 91074045 -108556105 - MER45 DNA AcHobo -90 1491 1451 * 1089 175 33 0 chr5 91074033 91074216 -108555934 - MER45 DNA AcHobo -851 189 1 1640 158 63 27 chr5 91074559 91074713 -108555437 - MLT1B LTR MaLR -43 347 200 2205 112 0 3 chr5 91074713 91075027 -108555123 - AluSq SINE Alu 0 313 1 1640 158 63 27 chr5 91075027 91075207 -108554943 - MLT1B LTR MaLR -190 200 1 950 201 52 43 chr5 91076224 91076358 -108553792 - MLT1D LTR MaLR 0 486 355 2235 98 0 16 chr5 91076358 91076664 -108553486 + AluSx SINE Alu 1 301 -11 950 201 52 43 chr5 91076664 91076959 -108553191 - MLT1D LTR MaLR -131 355 1 376 300 27 0 chr5 91076960 91077070 -108553080 - MIR SINE MIR -106 156 44 378 318 31 0 chr5 91077252 91077381 -108552769 + L2 LINE L2 3138 3270 -2 239 256 47 35 chr5 91078906 91078992 -108551158 + L2 LINE L2 3096 3182 -90 622 316 45 20 chr5 91079023 91079267 -108550883 - MIR SINE MIR -9 253 4 237 271 17 0 chr5 91079278 91079337 -108550813 + L2 LINE L2 3213 3272 0 251 273 62 70 chr5 91079508 91079636 -108550514 - MIR SINE MIR -108 154 28 461 257 69 42 chr5 91080468 91080612 -108549538 - L2 LINE L2 -4 3309 3162 925 286 86 37 chr5 91080783 91081293 -108548857 - L2 LINE L2 -411 2903 2369 364 296 165 24 chr5 91082019 91082347 -108547803 - L2 LINE L2 0 3313 2940 1117 104 0 25 chr5 91083489 91083652 -108546498 + AluSg/x SINE Alu 136 294 -18 294 313 119 11 chr5 91083985 91084161 -108545989 + MIR SINE MIR 60 254 -8 234 156 0 0 chr5 91084164 91084209 -108545941 + (CACCAT)n Simple_repeat Simple_repeat 1 45 0 319 319 0 42 chr5 91085019 91085138 -108545012 - MER5B DNA MER1_type 0 178 65 228 212 0 71 chr5 91085228 91085313 -108544837 + AluS SINE Alu 1 79 -224 367 295 90 36 chr5 91085770 91085832 -108544318 - MLT1J1 LTR MaLR -33 413 356 2022 133 10 0 chr5 91085832 91086140 -108544010 - AluSq SINE Alu -2 311 1 367 295 90 36 chr5 91086140 91086343 -108543807 - MLT1J1 LTR MaLR -90 356 84 676 221 84 21 chr5 91086478 91086668 -108543482 - MER20 DNA MER1_type -17 202 1 258 303 64 9 chr5 91087035 91087144 -108543006 - MIR3 SINE MIR 0 208 94 2017 99 7 11 chr5 91087400 91087727 -108542423 - AluSp SINE Alu 0 326 1 207 0 0 0 chr5 91087740 91087763 -108542387 + (A)n Simple_repeat Simple_repeat 1 23 0 2283 100 3 0 chr5 91088405 91088715 -108541435 + AluSx SINE Alu 1 311 -1 385 270 84 102 chr5 91088717 91088943 -108541207 + MIR SINE MIR 20 241 -21 892 219 260 94 chr5 91089109 91089444 -108540706 - L1ME LINE L1 -4869 1211 933 2228 170 50 29 chr5 91089444 91089861 -108540289 - MSTB LTR MaLR 0 426 1 8147 227 19 10 chr5 91089861 91091498 -108538652 - MSTB-int LTR MaLR 0 1651 1 2015 190 43 31 chr5 91091498 91091546 -108538604 - MSTB LTR MaLR 0 426 380 333 0 0 0 chr5 91091546 91091583 -108538567 + (CA)n Simple_repeat Simple_repeat 2 38 0 2015 190 43 31 chr5 91091583 91091782 -108538368 - MSTB LTR MaLR -46 380 169 2199 100 3 7 chr5 91091782 91092092 -108538058 + AluSc SINE Alu 1 309 0 2015 190 43 31 chr5 91092092 91092264 -108537886 - MSTB LTR MaLR -257 169 1 892 219 260 94 chr5 91092264 91093019 -108537131 - L1ME LINE L1 -5146 934 10 2256 107 0 0 chr5 91093052 91093360 -108536790 - AluSx SINE Alu -4 308 1 958 163 157 6 chr5 91093560 91093738 -108536412 + MER3 DNA MER1_type 1 205 -4 1245 178 51 72 chr5 91093829 91094121 -108536029 + AluJb SINE Alu 1 286 -16 551 196 150 0 chr5 91094439 91094572 -108535578 - MIR SINE MIR -25 237 85 335 306 8 0 chr5 91094621 91094742 -108535408 + (CA)n Simple_repeat Simple_repeat 1 122 0 183 267 0 0 chr5 91094756 91094831 -108535319 + (CA)n Simple_repeat Simple_repeat 1 75 0 203 322 17 0 chr5 91096145 91096204 -108533946 - L2 LINE L2 0 3272 3213 609 309 49 21 chr5 91096215 91096458 -108533692 + MIR SINE MIR 4 253 -9 239 256 47 35 chr5 91096489 91096575 -108533575 - L2 LINE L2 -90 3182 3096 356 259 9 45 chr5 91098055 91098167 -108531983 - MIR SINE MIR -3 259 152 * 719 230 69 46 chr5 91098164 91098381 -108531769 + MIR SINE MIR 5 226 -36 1392 162 46 56 chr5 91098381 91098683 -108531467 + AluJb SINE Alu 1 299 -13 470 218 0 0 chr5 91098703 91098790 -108531360 - MIR SINE MIR -100 162 76 484 151 0 0 chr5 91100059 91100132 -108530018 + THE1C LTR MaLR 301 373 -2 191 349 47 0 chr5 91100720 91100806 -108529344 - MIR SINE MIR 0 262 173 739 162 0 8 chr5 91101127 91101244 -108528906 - FLAM_C SINE Alu -26 117 2 233 272 158 44 chr5 91101349 91101463 -108528687 - MIR SINE MIR -73 189 63 218 314 0 0 chr5 91102438 91102508 -108527642 + L2 LINE L2 3203 3272 0 359 300 51 25 chr5 91102830 91102991 -108527159 + MIR SINE MIR 15 177 -85 386 291 0 10 chr5 91103639 91103742 -108526408 + MIR SINE MIR 59 160 -102 459 0 0 0 chr5 91103827 91103878 -108526272 + (TG)n Simple_repeat Simple_repeat 2 52 0 477 283 73 44 chr5 91104031 91104346 -108525804 + L1MC4 LINE L1 7719 8042 0 506 282 86 34 chr5 91104436 91104645 -108525505 + MLT1K LTR MaLR 82 301 -287 303 173 0 0 chr5 91104945 91105026 -108525124 + (TG)n Simple_repeat Simple_repeat 1 81 0 * 396 103 0 0 chr5 91105025 91105083 -108525067 + (GA)n Simple_repeat Simple_repeat 1 58 0 938 77 0 0 chr5 91105105 91105222 -108524928 + AluY SINE Alu 1 117 -194 2210 59 0 4 chr5 91105323 91105594 -108524556 + AluY SINE Alu 21 290 -21 331 382 0 7 chr5 91105607 91105751 -108524399 - MIR SINE MIR -110 152 10 441 215 20 3 chr5 91105964 91106087 -108524063 - MER5A DNA MER1_type -62 116 4 2346 94 0 0 chr5 91106381 91106688 -108523462 + AluSx SINE Alu 1 307 -5 264 318 11 0 chr5 91106986 91107074 -108523076 - AluSp/q SINE Alu 0 303 215 1333 173 16 0 chr5 91107538 91107792 -108522358 - AluSq SINE Alu -55 258 1 180 111 0 0 chr5 91107803 91107830 -108522320 + (TTA)n Simple_repeat Simple_repeat 3 29 0 471 256 15 51 chr5 91109071 91109208 -108520942 - MIR SINE MIR -85 177 46 201 95 0 48 chr5 91109402 91109444 -108520706 + (TG)n Simple_repeat Simple_repeat 1 40 0 352 191 67 22 chr5 91109716 91109805 -108520345 + MER5A DNA MER1_type 16 108 -81 651 285 91 14 chr5 91110544 91110895 -108519255 + L1MC4a LINE L1 5796 6173 -1635 336 361 39 20 chr5 91111255 91111456 -108518694 - MIR SINE MIR -34 228 20 933 161 0 0 chr5 91112112 91112261 -108517889 + FRAM SINE Alu 25 173 -3 1877 104 15 4 chr5 91112755 91113015 -108517135 - AluSx SINE Alu -23 289 27 221 318 0 0 chr5 91113218 91113284 -108516866 + MIR SINE MIR 92 157 -105 1672 234 94 64 chr5 91113704 91114280 -108515870 - MLT1G1 LTR MaLR -2 593 1 335 256 28 133 chr5 91114280 91114391 -108515759 - MIR SINE MIR -60 202 122 754 173 39 0 chr5 91114391 91114518 -108515632 + FLAM_C SINE Alu 2 133 0 335 256 28 133 chr5 91114518 91114617 -108515533 - MIR SINE MIR -140 122 14 2124 107 7 3 chr5 91115184 91115494 -108514656 - AluSq SINE Alu -2 311 1 252 340 75 7 chr5 91115566 91115713 -108514437 - L2 LINE L2 -1006 2308 2152 252 211 180 124 chr5 91115918 91115976 -108514174 - MER5B DNA MER1_type -8 170 117 1519 167 133 0 chr5 91115976 91116239 -108513911 + AluJo SINE Alu 3 300 -2 252 211 180 124 chr5 91116239 91116341 -108513809 - MER5B DNA MER1_type -61 117 1 622 191 93 37 chr5 91116575 91116737 -108513413 - MLT1C LTR MaLR -291 176 6 304 318 48 8 chr5 91116843 91116969 -108513181 - MIR SINE MIR -62 146 16 381 327 138 14 chr5 91117648 91117865 -108512285 + MIR SINE MIR 16 259 -3 268 238 234 59 chr5 91118050 91118353 -108511797 + L2 LINE L2 2253 2608 -706 187 331 95 67 chr5 91118444 91118803 -108511347 + L2 LINE L2 2595 2963 -351 1671 114 0 4 chr5 91119638 91119875 -108510275 - AluSx SINE Alu -76 236 1 249 200 84 42 chr5 91119875 91119970 -108510180 + MER96B DNA MER1_type? 319 417 0 2259 92 7 0 chr5 91121082 91121388 -108508762 + AluSx SINE Alu 1 308 -4 196 358 0 0 chr5 91121533 91121600 -108508550 - MIR SINE MIR -103 159 93 285 188 26 51 chr5 91122446 91122563 -108507587 + A-rich Low_complexity Low_complexity 3 116 0 1653 123 28 31 chr5 91122620 91122938 -108507212 - THE1B LTR MaLR -27 337 21 301 294 24 0 chr5 91123668 91123753 -108506397 - MIR3 SINE MIR -49 159 73 2195 108 3 3 chr5 91124026 91124332 -108505818 - AluSx SINE Alu -4 308 3 400 350 0 0 chr5 91125202 91125382 -108504768 + (TG)n Simple_repeat Simple_repeat 1 180 0 378 0 0 0 chr5 91125616 91125658 -108504492 + (TG)n Simple_repeat Simple_repeat 1 42 0 429 355 71 6 chr5 91127099 91127268 -108502882 - MIR SINE MIR -12 250 71 343 286 68 15 chr5 91127728 91127861 -108502289 + MIR3 SINE MIR 20 159 -49 344 158 0 37 chr5 91128012 91128094 -108502056 + CT-rich Low_complexity Low_complexity 4 82 0 324 361 0 0 chr5 91128782 91128879 -108501271 + polypurine Low_complexity Low_complexity 4 100 0 2287 117 0 0 chr5 91128898 91129207 -108500943 + AluSx SINE Alu 1 309 -3 223 307 94 31 chr5 91129218 91129345 -108500805 - L2 LINE L2 -219 3053 2919 522 324 69 16 chr5 91129766 91130013 -108500137 + MIR SINE MIR 2 261 -1 204 158 0 0 chr5 91130013 91130051 -108500099 + (CAT)n Simple_repeat Simple_repeat 1 38 0 288 278 199 7 chr5 91130167 91130318 -108499832 - L3 LINE CR1 -84 1493 1314 1880 123 3 47 chr5 91131113 91131430 -108498720 + AluY SINE Alu 1 303 -8 632 249 26 57 chr5 91131432 91131625 -108498525 + MIR SINE MIR 28 214 -48 441 248 64 9 chr5 91132523 91132649 -108497501 - MIR SINE MIR -62 146 16 486 263 8 12 chr5 91132971 91133120 -108497030 + MIR SINE MIR 34 145 -63 305 308 75 38 chr5 91133461 91133620 -108496530 + MIR SINE MIR 47 211 -51 707 238 75 0 chr5 91133762 91133922 -108496228 - MER96 DNA MER1_type 0 175 4 740 277 121 43 chr5 91134901 91135420 -108494730 - L2 LINE L2 0 3313 2774 715 220 71 6 chr5 91135887 91136055 -108494095 - MER5A DNA MER1_type -10 179 1 418 265 124 27 chr5 91137978 91138125 -108492025 - MIR SINE MIR -63 145 5 220 200 36 0 chr5 91138630 91138685 -108491465 - MIR SINE MIR -117 91 35 250 333 22 0 chr5 91140534 91140624 -108489526 + MIR3 SINE MIR 83 174 -34 292 325 25 0 chr5 91140684 91140804 -108489346 + L2 LINE L2 2933 3055 -217 187 237 0 0 chr5 91141253 91141291 -108488859 - L2 LINE L2 -227 3045 3008 2102 186 10 33 chr5 91141364 91141763 -108488387 - MLT1B LTR MaLR 0 390 1 181 338 50 0 chr5 91141808 91141888 -108488262 - L2 LINE L2 -21 3251 3168 421 327 20 20 chr5 91142541 91142691 -108487459 + MIR SINE MIR 34 183 -79 498 287 0 0 chr5 91143211 91143340 -108486810 - MER63 DNA MER1_type -76 760 6 422 289 108 16 chr5 91143464 91143658 -108486492 - MIR SINE MIR -33 229 18 222 261 90 54 chr5 91144650 91144761 -108485389 - L2 LINE L2 0 3313 3199 362 85 17 0 chr5 91144778 91144837 -108485313 + (GGA)n Simple_repeat Simple_repeat 3 62 0 181 340 75 0 chr5 91146509 91146603 -108483547 - L2 LINE L2 -5 3267 3167 872 171 39 60 chr5 91146610 91146841 -108483309 - MER20 DNA MER1_type 0 219 6 264 355 0 0 chr5 91147359 91147435 -108482715 - L2 LINE L2 0 3313 3238 546 151 12 0 chr5 91147995 91148081 -108482069 - AluJ/FLAM SINE Alu -225 87 1 314 343 41 50 chr5 91148375 91148516 -108481634 + L2 LINE L2 2581 2721 -593 1029 271 52 12 chr5 91148516 91148844 -108481306 - MER58B DNA MER1_type 0 341 1 314 343 41 50 chr5 91148844 91148944 -108481206 + L2 LINE L2 2721 2820 -494 923 171 6 0 chr5 91149271 91149446 -108480704 + MLT1C LTR MaLR 1 176 -291 821 186 0 0 chr5 91149456 91149585 -108480565 + FLAM_C SINE Alu 3 131 -12 718 255 78 8 chr5 91149611 91149854 -108480296 + MLT1C LTR MaLR 207 466 -1 25 0 0 0 chr5 91150394 91150419 -108479731 + AT_rich Low_complexity Low_complexity 1 25 0 991 105 0 0 chr5 91150565 91150698 -108479452 + AluSx SINE Alu 1 133 -179 1020 156 0 0 chr5 91150706 91150886 -108479264 + (TA)n Simple_repeat Simple_repeat 1 180 0 312 27 0 0 chr5 91150886 91150923 -108479227 + (CA)n Simple_repeat Simple_repeat 1 37 0 1083 136 34 11 chr5 91150923 91151099 -108479051 + AluSx SINE Alu 125 304 -8 458 321 72 5 chr5 91151320 91151513 -108478637 + MIR SINE MIR 9 214 -48 2012 128 17 3 chr5 91152116 91152414 -108477736 - AluSx SINE Alu -10 302 1 967 232 49 15 chr5 91152437 91152704 -108477446 - MLT2B2 LTR ERVL 0 515 240 233 224 158 62 chr5 91153803 91153959 -108476191 - MIR SINE MIR -94 168 2 575 283 88 4 chr5 91154711 91154937 -108475213 - MIR SINE MIR 0 262 18 188 179 0 26 chr5 91155075 91155114 -108475036 - L2 LINE L2 -7 3306 3269 206 295 53 42 chr5 91155314 91155409 -108474741 + MIR SINE MIR 65 160 -102 866 140 0 22 chr5 91155667 91155803 -108474347 + FLAM_C SINE Alu 1 133 0 1705 134 11 14 chr5 91155814 91156089 -108474061 + AluSx SINE Alu 39 312 0 1712 179 21 0 chr5 91156662 91156953 -108473197 - AluSx SINE Alu -15 297 1 890 243 65 4 chr5 91157732 91158008 -108472142 + MLT1C LTR MaLR 1 293 -174 261 284 93 10 chr5 91158231 91158425 -108471725 + MLT1C LTR MaLR 239 448 -19 203 308 64 0 chr5 91158784 91158862 -108471288 - MIR SINE MIR -60 148 66 207 333 75 21 chr5 91159567 91159660 -108470490 - MIR SINE MIR -78 184 87 329 335 87 19 chr5 91159981 91160142 -108470008 + MIR SINE MIR 39 210 -52 321 168 93 1 chr5 91160876 91160960 -108469190 - MER69 DNA AcHobo -24 2502 64 317 273 20 20 chr5 91161135 91161234 -108468916 + MIR3 SINE MIR 109 207 -1 489 344 50 21 chr5 91162318 91162597 -108467553 + L2 LINE L2 2986 3272 0 429 223 13 6 chr5 91162597 91162754 -108467396 + (TGGA)n Simple_repeat Simple_repeat 2 159 0 302 325 66 30 chr5 91162802 91162968 -108467182 - MIR3 SINE MIR -36 172 1 267 31 0 0 chr5 91163201 91163233 -108466917 + (CA)n Simple_repeat Simple_repeat 1 32 0 482 159 0 118 chr5 91163903 91164073 -108466077 - AluJb SINE Alu -74 238 89 404 277 0 0 chr5 91164429 91164523 -108465627 + MLT1H LTR MaLR 71 164 -385 466 198 11 1 chr5 91166037 91166134 -108464016 + MIR SINE MIR 51 148 -60 303 365 41 18 chr5 91166682 91166852 -108463298 + MIR3 SINE MIR 25 198 -10 912 216 42 28 chr5 91167771 91167984 -108462166 + MER20 DNA MER1_type 4 219 0 363 105 0 0 chr5 91168108 91168165 -108461985 + (TG)n Simple_repeat Simple_repeat 1 57 0 547 254 96 23 chr5 91168665 91168842 -108461308 - MIR SINE MIR -12 250 61 285 328 108 10 chr5 91169329 91169375 -108460775 + L2 LINE L2 1882 1922 -1392 2031 134 0 10 chr5 91169375 91169688 -108460462 - AluSx SINE Alu -2 310 1 285 328 108 10 chr5 91169688 91169845 -108460305 + L2 LINE L2 1922 2105 -1209 337 306 41 25 chr5 91170194 91170390 -108459760 + L2 LINE L2 2644 2842 -472 324 306 132 0 chr5 91170952 91171096 -108459054 + MIR SINE MIR 31 193 -69 313 203 0 54 chr5 91171923 91171997 -108458153 + L2 LINE L2 3156 3225 -47 1035 247 149 22 chr5 91172560 91173010 -108457140 + LTR33A LTR ERVL 11 517 -6 391 311 196 15 chr5 91173785 91174241 -108455909 + L2 LINE L2 2682 3272 0 353 278 78 42 chr5 91175409 91175509 -108454641 + MIR SINE MIR 47 142 -120 1634 130 207 30 chr5 91175509 91175871 -108454279 + MSTB LTR MaLR 1 426 0 353 278 78 42 chr5 91175871 91175961 -108454189 + MIR SINE MIR 142 244 -18 275 227 41 41 chr5 91176335 91176432 -108453718 - MIR3 SINE MIR -1 207 111 256 246 108 60 chr5 91176694 91176842 -108453308 + MIR3 SINE MIR 2 155 -53 252 272 68 39 chr5 91176889 91176992 -108453158 - MIR3 SINE MIR -2 206 101 183 42 0 0 chr5 91177582 91177606 -108452544 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 328 269 41 88 chr5 91177648 91177819 -108452331 - MIR3 SINE MIR -51 157 8 319 323 169 0 chr5 91178102 91178232 -108451918 + L2 LINE L2 3121 3272 0 192 286 32 0 chr5 91179012 91179075 -108451075 - MIR SINE MIR -62 146 82 480 270 20 14 chr5 91179284 91179432 -108450718 + MIR SINE MIR 12 160 -102 267 376 13 34 chr5 91180097 91180246 -108449904 - L2 LINE L2 0 3313 3168 1037 227 123 24 chr5 91180358 91180732 -108449418 - MLT1C LTR MaLR -17 450 40 212 338 12 12 chr5 91181017 91181097 -108449053 + MIR3 SINE MIR 101 180 -28 508 299 39 0 chr5 91182023 91182177 -108447973 + MIR SINE MIR 70 229 -33 1265 177 28 45 chr5 91182727 91182779 -108447371 - L1MB5 LINE L1 0 6174 6123 1911 141 7 3 chr5 91182779 91183070 -108447080 + AluJo SINE Alu 13 304 -8 1265 177 28 45 chr5 91183070 91183305 -108446845 - L1MB5 LINE L1 -51 6123 5892 365 308 38 0 chr5 91183464 91183597 -108446553 + MIR3 SINE MIR 30 167 -41 347 287 154 5 chr5 91184386 91184574 -108445576 + MIR SINE MIR 34 249 -13 512 261 152 38 chr5 91185653 91185864 -108444286 - MIR SINE MIR 0 262 28 214 179 0 71 chr5 91185895 91185951 -108444199 - MIR3 SINE MIR -11 197 146 1955 204 64 31 chr5 91186406 91186858 -108443292 - MLT1C LTR MaLR 0 467 1 273 350 39 0 chr5 91186928 91187031 -108443119 - L2 LINE L2 -2 3270 3164 344 297 91 8 chr5 91188168 91188346 -108441804 - MIR SINE MIR -37 225 34 298 265 33 66 chr5 91188895 91189046 -108441104 + MIR SINE MIR 67 212 -50 1272 312 57 38 chr5 91190240 91191330 -108438820 - L1MC4a LINE L1 -743 5403 4816 2306 114 29 0 chr5 91293036 91293378 -108336772 - Tigger1 DNA MER2_type -3 2415 2064 264 88 6 27 chr5 91293378 91293548 -108336602 + AluSg SINE Alu 1 223 -79 27 29 0 0 chr5 91294213 91294247 -108335903 + AT_rich Low_complexity Low_complexity 1 34 0 1493 182 7 7 chr5 91294484 91294753 -108335397 - AluJo SINE Alu -14 298 30 2146 110 3 7 chr5 91295138 91295437 -108334713 + AluSq SINE Alu 1 298 -15 183 80 0 0 chr5 91295487 91295512 -108334638 + (A)n Simple_repeat Simple_repeat 1 25 0 321 146 45 11 chr5 91295777 91295866 -108334284 - L1PA10 LINE L1 0 6168 6077 361 49 0 98 chr5 91296335 91296417 -108333733 + L1PA2 LINE L1 6082 6155 0 4276 152 13 23 chr5 91297048 91297759 -108332391 - L1PA16 LINE L1 0 6155 5428 192 77 0 0 chr5 91297759 91297785 -108332365 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4276 152 13 23 chr5 91297785 91297904 -108332246 - L1PA16 LINE L1 -727 5428 5309 213 121 0 0 chr5 91297964 91297997 -108332153 + (T)n Simple_repeat Simple_repeat 1 33 0 358 321 76 9 chr5 91298462 91298688 -108331462 + L1MC/D LINE L1 5472 5712 -509 212 31 62 0 chr5 91299087 91299119 -108331031 + A-rich Low_complexity Low_complexity 3 36 0 469 260 98 29 chr5 91299518 91299691 -108330459 - MIR SINE MIR -70 192 8 1106 228 42 55 chr5 91300638 91300866 -108329284 + L1MC4 LINE L1 6698 6921 -1121 252 77 0 0 chr5 91300866 91300905 -108329245 + (TAA)n Simple_repeat Simple_repeat 2 40 0 1106 228 42 55 chr5 91300905 91301057 -108329093 + L1MC4 LINE L1 6921 7073 -969 2857 183 43 28 chr5 91301057 91301593 -108328557 - MLT2B3 LTR ERVL -10 544 1 400 235 29 37 chr5 91301597 91301733 -108328417 + L1MC4 LINE L1 7101 7235 -807 2097 249 73 25 chr5 91301775 91302461 -108327689 + L1MC4 LINE L1 7324 8042 0 1357 245 144 71 chr5 91302799 91303451 -108326699 - Charlie2b DNA MER1_type -2005 777 78 571 82 0 21 chr5 91303681 91303778 -108326372 + (TTCC)n Simple_repeat Simple_repeat 4 98 0 216 294 24 95 chr5 91304021 91304092 -108326058 - L2 LINE L2 0 3272 3212 2286 106 0 0 chr5 91304092 91304395 -108325755 - AluSq SINE Alu -10 303 1 216 294 24 95 chr5 91304395 91304449 -108325701 - L2 LINE L2 -60 3212 3156 247 325 155 16 chr5 91305720 91305914 -108324236 + MIR SINE MIR 36 256 -6 289 222 145 43 chr5 91306218 91306335 -108323815 - MLT1L LTR MaLR -335 280 152 450 280 120 0 chr5 91306451 91306601 -108323549 + MIR SINE MIR 21 188 -74 696 200 22 16 chr5 91307365 91307550 -108322600 - MER53 DNA DNA 0 189 4 1238 164 19 10 chr5 91307731 91307938 -108322212 + AluJo SINE Alu 1 209 -103 1894 226 66 47 chr5 91308195 91308727 -108321423 - MLT2B3 LTR ERVL -12 542 1 1620 153 56 53 chr5 91310578 91310919 -108319231 - MER2 DNA MER2_type -2 342 1 207 261 0 0 chr5 91311099 91311145 -108319005 + L2 LINE L2 3268 3313 0 345 319 104 0 chr5 91311890 91312025 -108318125 + MIR SINE MIR 8 156 -106 468 322 76 50 chr5 91312132 91312449 -108317701 + MLT1I LTR MaLR 72 396 -13 231 234 0 0 chr5 91312609 91312656 -108317494 + MIR SINE MIR 206 252 -10 26 0 0 0 chr5 91313194 91313220 -108316930 + AT_rich Low_complexity Low_complexity 1 26 0 2775 110 37 19 chr5 91313440 91313592 -108316558 - L1P5 LINE L1 -442 6425 6277 3958 49 6 2 chr5 91313592 91314080 -108316070 - LTR2B LTR ERV1 0 490 1 2775 110 37 19 chr5 91314080 91314486 -108315664 - L1P5 LINE L1 -590 6277 5857 * 5440 126 19 17 chr5 91314483 91315442 -108314708 - L1P5 LINE L1 -4657 2206 1102 504 0 0 0 chr5 91316347 91316403 -108313747 + (TA)n Simple_repeat Simple_repeat 2 57 0 36 23 0 0 chr5 91316473 91316516 -108313634 + AT_rich Low_complexity Low_complexity 1 43 0 348 250 52 87 chr5 91316787 91316959 -108313191 - L3 LINE CR1 -9 1568 1403 437 266 175 19 chr5 91319162 91319316 -108310834 + MER5B DNA MER1_type 1 178 0 1826 190 0 3 chr5 91319601 91319912 -108310238 + AluSx SINE Alu 1 310 -2 2249 186 109 4 chr5 91319918 91320397 -108309753 + L1MA5A LINE L1 5484 6012 -285 1345 191 66 41 chr5 91320397 91320763 -108309387 + THE1C LTR MaLR 1 375 0 3846 199 37 3 chr5 91320763 91321539 -108308611 + THE1C-int LTR MaLR 1 803 -848 28 0 0 0 chr5 91322833 91322861 -108307289 + AT_rich Low_complexity Low_complexity 1 28 0 970 204 50 99 chr5 91322913 91323116 -108307034 + MLT2C1 LTR ERVL 13 224 -173 423 0 0 0 chr5 91323116 91323163 -108306987 + (CA)n Simple_repeat Simple_repeat 2 48 0 261 0 0 0 chr5 91323162 91323191 -108306959 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 970 204 50 99 chr5 91323163 91323330 -108306820 + MLT2C1 LTR ERVL 224 338 -59 487 107 24 0 chr5 91323330 91323414 -108306736 + (TCTA)n Simple_repeat Simple_repeat 3 88 0 712 150 25 0 chr5 91323471 91323591 -108306559 + MLT1-int LTR MaLR 4 126 -1245 21 89 0 0 chr5 91323814 91323870 -108306280 + AT_rich Low_complexity Low_complexity 1 56 0 250 335 127 47 chr5 91323921 91324133 -108306017 - L3 LINE CR1 -2 1575 1347 212 291 18 0 chr5 91324128 91324183 -108305967 - MIR SINE MIR -59 149 94 * 275 329 117 12 chr5 91324368 91324608 -108305542 + MLT1K LTR MaLR 204 468 -120 790 271 118 47 chr5 91325117 91325934 -108304216 - HAL1 LINE L1 -750 1757 4 282 29 0 0 chr5 91326232 91326267 -108303883 + (TG)n Simple_repeat Simple_repeat 1 35 0 8580 28 40 0 chr5 91326567 91328340 -108301810 + L1PA5 LINE L1 4346 6153 -1 5358 216 50 13 chr5 91328863 91331315 -108298835 + L1M2 LINE L1 1894 4433 -2415 621 223 112 1 chr5 91331431 91331694 -108298456 - MLT1E1 LTR MaLR -288 366 56 33 43 0 0 chr5 91331746 91331793 -108298357 + AT_rich Low_complexity Low_complexity 1 47 0 306 0 0 0 chr5 91331976 91332010 -108298140 + (TG)n Simple_repeat Simple_repeat 1 34 0 23 54 0 0 chr5 91332308 91332345 -108297805 + AT_rich Low_complexity Low_complexity 1 37 0 511 306 42 7 chr5 91332375 91332519 -108297631 - MIR SINE MIR -111 151 3 452 299 90 68 chr5 91333159 91333658 -108296492 - LTR67 LTR ERVL -4 553 44 521 255 21 7 chr5 91333703 91333844 -108296306 + L1PB4 LINE L1 5999 6141 -15 1014 138 0 0 chr5 91334155 91334307 -108295843 + AluSp/q SINE Alu 158 309 -4 1315 91 69 13 chr5 91335400 91335632 -108294518 - Tigger3(Golem) DNA MER2_type -321 2708 2464 948 178 183 0 chr5 91335629 91335826 -108294324 - Tigger3(Golem) DNA MER2_type -2796 233 1 * 284 343 19 0 chr5 91336500 91336608 -108293542 - MER58A DNA MER1_type 0 110 1 24 32 0 0 chr5 91337442 91337473 -108292677 + AT_rich Low_complexity Low_complexity 1 31 0 1864 135 0 31 chr5 91337808 91338097 -108292053 + AluSx SINE Alu 18 297 -15 415 313 58 54 chr5 91339374 91339668 -108290482 + LTR16A1 LTR ERVL 161 455 -2 3218 240 45 42 chr5 91339772 91341085 -108289065 + HERVE LTR ERV1 73 1582 -6441 6349 147 3 15 chr5 91341086 91342159 -108287991 + HERVE LTR ERV1 2936 3995 -3818 484 370 87 22 chr5 91342419 91342957 -108287193 - L1 LINE L1 -1114 5032 4460 489 269 90 54 chr5 91342962 91343408 -108286742 + LTR37B LTR ERV1 7 468 0 299 295 48 24 chr5 91343450 91343657 -108286493 - L1 LINE L1 -1727 4419 4208 206 271 0 17 chr5 91343829 91343888 -108286262 - MIR SINE MIR -52 210 153 297 0 0 0 chr5 91344533 91344566 -108285584 + (CA)n Simple_repeat Simple_repeat 2 34 0 887 240 77 10 chr5 91344679 91344887 -108285263 + MER58A DNA MER1_type 2 223 -1 326 337 60 16 chr5 91345028 91345280 -108284870 - L1ME LINE L1 -503 5618 5356 20769 30 1 0 chr5 91345645 91348265 -108281885 - L1P LINE L1 -1784 4362 1741 1808 165 17 11 chr5 91348383 91348740 -108281410 - THE1C-int LTR MaLR -1221 359 1 1797 112 133 24 chr5 91348740 91349078 -108281072 - THE1C LTR MaLR 0 375 1 214 295 74 42 chr5 91349086 91349181 -108280969 + MIR SINE MIR 36 133 -75 389 356 89 5 chr5 91350322 91350524 -108279626 + MIR SINE MIR 44 262 0 1640 139 51 53 chr5 91350800 91351175 -108278975 - THE1C LTR MaLR 0 375 2 1638 176 44 16 chr5 91351413 91351776 -108278374 + LTR52 LTR ERVL 1 373 -48 2842 213 26 23 chr5 91351779 91352550 -108277600 - L1 LINE L1 -924 5938 5166 256 363 134 23 chr5 91353569 91353740 -108276410 + MIR SINE MIR 3 192 -70 278 289 93 0 chr5 91353983 91354080 -108276070 + MIR SINE MIR 82 187 -75 23 92 0 0 chr5 91354143 91354208 -108275942 + AT_rich Low_complexity Low_complexity 1 65 0 681 303 61 33 chr5 91354791 91355151 -108274999 - L2 LINE L2 -9 3304 2935 529 261 220 0 chr5 91355285 91355526 -108274624 - L2 LINE L2 -768 2546 2253 206 207 17 17 chr5 91355552 91355610 -108274540 + (TAAA)n Simple_repeat Simple_repeat 2 59 0 3414 75 20 2 chr5 91355820 91356316 -108273834 - HERVL LTR ERVL -42 5612 5108 * 4211 128 150 34 chr5 91356315 91357321 -108272829 + pTR5 LTR ERV1 743 2025 -413 332 204 31 20 chr5 91357321 91357419 -108272731 + LTR30 LTR ERV1 544 642 -80 1154 131 1 7 chr5 91357419 91357614 -108272536 + pTR5 LTR ERV1 66 392 -2046 1594 105 46 0 chr5 91357615 91357853 -108272297 - HERVL LTR ERVL -543 5111 4863 1785 194 67 28 chr5 91357853 91358081 -108272069 - LTR2 LTR ERV1 0 449 231 204 40 0 0 chr5 91358081 91358106 -108272044 + (CAGAA)n Simple_repeat Simple_repeat 1 25 0 1785 194 67 28 chr5 91358106 91358309 -108271841 - LTR2 LTR ERV1 -218 231 1 2914 193 2 0 chr5 91358309 91358848 -108271302 - Harlequin LTR ERV1 -1 6895 6356 6412 210 40 10 chr5 91358863 91360503 -108269647 - Harlequin LTR ERV1 -2170 4726 4032 7654 177 33 21 chr5 91361144 91362863 -108267287 - L1PBa LINE L1 -2451 4411 2715 1817 111 93 29 chr5 91362863 91363142 -108267008 - AluSp SINE Alu -16 297 1 7654 177 33 21 chr5 91363142 91363512 -108266638 - L1PBa LINE L1 -4147 2715 2351 4543 133 50 5 chr5 91363512 91364258 -108265892 + MER4E LTR ERV1 1 779 0 7654 177 33 21 chr5 91364258 91365250 -108264900 - L1PBa LINE L1 -4511 2351 1292 309 143 0 0 chr5 91365255 91365304 -108264846 - L1PBa LINE L1 -5721 1142 1094 1181 183 16 0 chr5 91365308 91365554 -108264596 - L1PBa LINE L1 -5817 1046 797 3840 142 6 5 chr5 91365655 91366302 -108263848 - LTR17 LTR ERV1 -132 648 1 325 223 157 41 chr5 91366302 91366380 -108263770 - L2 LINE L2 -361 2953 2855 216 97 0 0 chr5 91366380 91366411 -108263739 + (GAGTG)n Simple_repeat Simple_repeat 4 34 0 325 223 157 41 chr5 91366411 91366453 -108263697 - L2 LINE L2 -459 2855 2819 1497 307 88 37 chr5 91367144 91367562 -108262588 - L2 LINE L2 -5 3308 2913 207 100 0 0 chr5 91367562 91367592 -108262558 + (GAGTG)n Simple_repeat Simple_repeat 1 30 0 1497 307 88 37 chr5 91367592 91368280 -108261870 - L2 LINE L2 -400 2913 2137 1515 203 26 57 chr5 91368781 91369166 -108260984 + MLT1F LTR MaLR 16 388 -154 1975 115 3 32 chr5 91369184 91369498 -108260652 + AluY SINE Alu 2 306 -5 245 194 229 97 chr5 91369603 91369778 -108260372 - MIR SINE MIR -2 260 63 232 308 0 29 chr5 91370414 91370518 -108259632 + CT-rich Low_complexity Low_complexity 5 105 0 2437 51 0 0 chr5 91371069 91371364 -108258786 + AluY SINE Alu 1 295 -16 573 269 41 20 chr5 91371957 91372154 -108257996 + MLT1H LTR MaLR 23 223 -326 198 103 0 0 chr5 91372681 91372710 -108257440 + (TG)n Simple_repeat Simple_repeat 2 30 0 403 204 28 28 chr5 91372896 91373004 -108257146 + MLT1L LTR MaLR 501 608 -7 1137 267 24 20 chr5 91373229 91373570 -108256580 - MER93a LTR ERV1 0 402 61 521 215 11 0 chr5 91373875 91373968 -108256182 + MER5B DNA MER1_type 53 146 -32 225 274 97 0 chr5 91374000 91374062 -108256088 + MER5A DNA MER1_type 97 164 -25 366 304 7 14 chr5 91574296 91574434 -108055716 + MLT1L LTR MaLR 477 613 -2 241 316 13 0 chr5 91574453 91574529 -108055621 + L2 LINE L2 3195 3271 -1 3641 63 0 0 chr5 91574700 91575161 -108054989 + L1PA8 LINE L1 5709 6169 -3 342 270 159 16 chr5 91577595 91577721 -108052429 + L2 LINE L2 3129 3272 0 1172 187 41 29 chr5 91578758 91578867 -108051283 + MER33 DNA MER1_type 4 110 -2475 2190 88 0 32 chr5 91578867 91579175 -108050975 - AluY SINE Alu -13 298 1 1172 187 41 29 chr5 91579175 91579380 -108050770 + MER33 DNA MER1_type 110 322 -2 1574 78 5 23 chr5 91580652 91580870 -108049280 + AluSg/x SINE Alu 87 300 -12 2538 202 50 45 chr5 91582889 91583563 -108046587 - L1MD2 LINE L1 -13 6346 5669 349 250 87 11 chr5 91583581 91583673 -108046477 + L2 LINE L2 3174 3272 0 27 0 0 0 chr5 91583851 91583878 -108046272 + AT_rich Low_complexity Low_complexity 1 27 0 1457 259 124 26 chr5 91583945 91584517 -108045633 + L1MEc LINE L1 35 662 -5734 1526 227 74 71 chr5 91584885 91584934 -108045216 + L1MC5 LINE L1 6563 6610 -1351 252 100 0 0 chr5 91584934 91584974 -108045176 + (CA)n Simple_repeat Simple_repeat 2 41 0 1526 227 74 71 chr5 91584974 91585588 -108044562 + L1MC5 LINE L1 6610 7239 -722 1722 221 49 34 chr5 91585625 91586218 -108043932 + L1MC5 LINE L1 7315 7916 -45 23 68 0 0 chr5 91587037 91587081 -108043069 + AT_rich Low_complexity Low_complexity 1 44 0 2146 117 7 0 chr5 91587327 91587656 -108042494 - AluSq SINE Alu 0 313 1 1029 173 0 6 chr5 91588150 91588329 -108041821 - MER3 DNA MER1_type -78 131 1 267 190 0 0 chr5 91588372 91588430 -108041720 + (TA)n Simple_repeat Simple_repeat 2 59 0 39 80 0 0 chr5 91592018 91592106 -108038044 + AT_rich Low_complexity Low_complexity 1 88 0 29 0 0 0 chr5 91592219 91592248 -108037902 + AT_rich Low_complexity Low_complexity 1 29 0 24 91 0 0 chr5 91593009 91593075 -108037075 + AT_rich Low_complexity Low_complexity 1 66 0 21 0 0 0 chr5 91593957 91593978 -108036172 + AT_rich Low_complexity Low_complexity 1 21 0 277 382 0 10 chr5 91595825 91595927 -108034223 + MIR SINE MIR 21 121 -87 22 0 0 0 chr5 91596347 91596369 -108033781 + AT_rich Low_complexity Low_complexity 1 22 0 347 250 134 0 chr5 91597402 91597514 -108032636 - MER5A DNA MER1_type -28 161 35 222 37 0 0 chr5 91598437 91598464 -108031686 + (TG)n Simple_repeat Simple_repeat 2 28 0 240 154 0 0 chr5 91598535 91598587 -108031563 + GA-rich Low_complexity Low_complexity 2 53 0 304 282 38 46 chr5 91600318 91600449 -108029701 - MIR SINE MIR -1 261 132 565 294 123 4 chr5 91600789 91601017 -108029133 + MARNA DNA Mariner 281 535 -51 614 316 28 8 chr5 91601084 91601337 -108028813 + MIR SINE MIR 2 259 -3 31 0 0 0 chr5 91601804 91601835 -108028315 + AT_rich Low_complexity Low_complexity 1 31 0 618 123 14 4 chr5 91601885 91602106 -108028044 + AluSx SINE Alu 1 310 0 463 256 31 38 chr5 91602984 91603144 -108027006 - MIR SINE MIR -41 221 63 37 23 0 0 chr5 91603373 91603417 -108026733 + AT_rich Low_complexity Low_complexity 1 44 0 197 100 50 0 chr5 91603558 91603598 -108026552 + A-rich Low_complexity Low_complexity 2 43 0 2377 60 0 41 chr5 91603698 91604014 -108026136 + AluY SINE Alu 1 303 -8 312 303 0 30 chr5 91604524 91604623 -108025527 + MIR3 SINE MIR 87 182 -26 186 43 0 0 chr5 91604726 91604749 -108025401 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 901 164 6 18 chr5 91604776 91604941 -108025209 + MER3 DNA MER1_type 1 163 -46 302 280 102 8 chr5 91608894 91609012 -108021138 - MIR SINE MIR -63 145 17 186 103 0 0 chr5 91609077 91609106 -108021044 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 28 61 0 0 chr5 91609444 91609493 -108020657 + AT_rich Low_complexity Low_complexity 1 49 0 191 276 26 40 chr5 91609623 91609699 -108020451 + L2 LINE L2 663 737 -2577 425 65 0 16 chr5 91612046 91612108 -108018042 + (TCC)n Simple_repeat Simple_repeat 1 61 0 224 260 14 0 chr5 91612119 91612192 -108017958 + (CG)n Simple_repeat Simple_repeat 2 75 0 21 0 0 0 chr5 91613251 91613272 -108016878 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr5 91616003 91616035 -108014115 + AT_rich Low_complexity Low_complexity 1 32 0 201 74 0 0 chr5 91619330 91619357 -108010793 + (A)n Simple_repeat Simple_repeat 1 27 0 22 70 0 0 chr5 91620545 91620588 -108009562 + AT_rich Low_complexity Low_complexity 1 43 0 270 0 0 0 chr5 91621682 91621712 -108008438 + (A)n Simple_repeat Simple_repeat 1 30 0 198 71 0 0 chr5 91622344 91622372 -108007778 + (TG)n Simple_repeat Simple_repeat 2 29 0 428 289 91 12 chr5 91622553 91622795 -108007355 + MIR SINE MIR 1 261 -1 23 0 0 0 chr5 91623027 91623050 -108007100 + AT_rich Low_complexity Low_complexity 1 23 0 267 174 0 0 chr5 91623377 91623423 -108006727 + L2 LINE L2 3268 3313 0 183 42 0 0 chr5 91624043 91624067 -108006083 + (TAA)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr5 91625169 91625190 -108004960 + AT_rich Low_complexity Low_complexity 1 21 0 534 70 0 0 chr5 91626089 91626160 -108003990 + (TA)n Simple_repeat Simple_repeat 2 72 0 778 220 68 55 chr5 91627825 91628061 -108002089 - MIR SINE MIR -4 258 20 2462 61 0 3 chr5 91629216 91629526 -108000624 + AluY SINE Alu 1 309 -2 1146 212 17 55 chr5 91630219 91630350 -107999800 + AluJo SINE Alu 5 139 -163 1998 102 31 14 chr5 91630350 91630644 -107999506 + AluSx SINE Alu 1 299 -13 1146 212 17 55 chr5 91630644 91630805 -107999345 + AluJo SINE Alu 139 286 -16 297 205 26 0 chr5 91630805 91630922 -107999228 + (TA)n Simple_repeat Simple_repeat 1 120 0 348 325 60 0 chr5 91630929 91631046 -107999104 - MER5B DNA MER1_type -53 125 2 1555 145 24 98 chr5 91631055 91631070 -107999080 + L1MA7 LINE L1 5770 5785 -506 830 150 7 0 chr5 91631070 91631223 -107998927 - L1MA6 LINE L1 0 6300 6147 1555 145 24 98 chr5 91631223 91631282 -107998868 + L1MA7 LINE L1 5785 5847 -444 2054 124 0 25 chr5 91631282 91631597 -107998553 + AluSx SINE Alu 1 307 -5 1555 145 24 98 chr5 91631597 91631900 -107998250 + L1MA7 LINE L1 5847 6120 -171 180 77 0 0 chr5 91633081 91633107 -107997043 + (TG)n Simple_repeat Simple_repeat 1 26 0 617 296 6 12 chr5 91634021 91634193 -107995957 - MER5B DNA MER1_type -7 171 1 2012 140 62 8 chr5 91637536 91637892 -107992258 - THE1C LTR MaLR 0 375 1 10103 110 13 49 chr5 91637892 91639532 -107990618 - THE1C-int LTR MaLR 0 1580 1 2191 118 56 8 chr5 91639534 91639890 -107990260 - THE1C LTR MaLR -2 373 1 21 71 0 0 chr5 91640110 91640152 -107989998 + AT_rich Low_complexity Low_complexity 1 42 0 199 330 85 42 chr5 91640672 91640790 -107989360 + L2 LINE L2 3146 3268 -4 1431 226 7 0 chr5 91642189 91642468 -107987682 - AluJo SINE Alu -31 281 1 1382 137 20 131 chr5 91642477 91642820 -107987330 - AluYb8 SINE Alu -2 306 2 26 0 0 0 chr5 91642871 91642897 -107987253 + AT_rich Low_complexity Low_complexity 1 26 0 26 0 0 0 chr5 91643651 91643677 -107986473 + AT_rich Low_complexity Low_complexity 1 26 0 2414 127 38 71 chr5 91643969 91644154 -107985996 - Tigger2a DNA MER2_type -2274 434 244 1649 96 0 0 chr5 91644154 91644372 -107985778 - AluSc SINE Alu -6 303 86 2414 127 38 71 chr5 91644372 91644635 -107985515 - Tigger2a DNA MER2_type -2464 244 1 393 149 0 0 chr5 91644665 91644732 -107985418 + (TG)n Simple_repeat Simple_repeat 2 68 0 564 289 149 0 chr5 91644954 91645155 -107984995 + MIR SINE MIR 7 237 -25 1973 64 4 4 chr5 91645208 91645475 -107984675 + L1PA4 LINE L1 5889 6155 0 21 0 0 0 chr5 91645995 91646016 -107984134 + AT_rich Low_complexity Low_complexity 1 21 0 29 78 0 0 chr5 91646158 91646222 -107983928 + AT_rich Low_complexity Low_complexity 1 64 0 2397 76 0 0 chr5 91646238 91646539 -107983611 - AluSg SINE Alu -9 301 1 193 239 70 99 chr5 91646869 91646940 -107983210 + MIR SINE MIR 156 224 -38 2074 114 3 3 chr5 91649042 91649339 -107980811 + AluSx SINE Alu 1 297 -15 1095 92 92 0 chr5 91649505 91649657 -107980493 + AluSc SINE Alu 125 290 -19 394 331 0 42 chr5 91651047 91651189 -107978961 + MIR SINE MIR 18 153 -109 2249 80 0 20 chr5 91651304 91651604 -107978546 + AluSc SINE Alu 5 298 -11 431 250 54 9 chr5 91653563 91653675 -107976475 + L2 LINE L2 3197 3313 0 1806 182 10 0 chr5 91653875 91654182 -107975968 - AluJo SINE Alu -2 310 1 697 304 81 26 chr5 91655039 91655384 -107974766 + L3b LINE CR1 1218 1581 -2 324 64 0 0 chr5 91656040 91656087 -107974063 + (GA)n Simple_repeat Simple_repeat 2 48 0 244 303 13 0 chr5 91656632 91656708 -107973442 + GA-rich Low_complexity Low_complexity 2 78 0 769 170 31 0 chr5 91657376 91657523 -107972627 + MIR SINE MIR 64 217 -45 216 0 0 0 chr5 91657755 91657779 -107972371 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 322 275 173 30 chr5 91657785 91657963 -107972187 - MIR3 SINE MIR -3 205 2 198 0 0 0 chr5 91658384 91658406 -107971744 + (T)n Simple_repeat Simple_repeat 1 22 0 2271 106 0 3 chr5 91659577 91659879 -107970271 - AluSq SINE Alu -12 301 1 24 0 0 0 chr5 91660432 91660456 -107969694 + AT_rich Low_complexity Low_complexity 1 24 0 308 341 18 55 chr5 91660542 91660706 -107969444 - MIR SINE MIR -71 191 34 * 496 300 72 52 chr5 91660672 91660979 -107969171 + L2 LINE L2 2961 3273 -40 278 360 33 47 chr5 91665403 91665614 -107964536 - MIR SINE MIR -29 233 26 361 324 97 60 chr5 91665812 91666182 -107963968 - L2 LINE L2 -6 3266 2883 186 164 15 45 chr5 91668194 91668261 -107961889 + GA-rich Low_complexity Low_complexity 2 66 0 21 0 0 0 chr5 91671768 91671789 -107958361 + AT_rich Low_complexity Low_complexity 1 21 0 2423 130 33 51 chr5 91673410 91673901 -107956249 - L1MA3 LINE L1 0 6305 5824 1214 191 84 43 chr5 91673921 91674220 -107955930 + AluJb SINE Alu 1 311 -1 23 0 0 0 chr5 91675198 91675221 -107954929 + AT_rich Low_complexity Low_complexity 1 23 0 33 25 0 0 chr5 91675384 91675424 -107954726 + AT_rich Low_complexity Low_complexity 1 40 0 904 240 32 5 chr5 91675548 91675765 -107954385 - MER58A DNA MER1_type -1 223 1 228 336 164 14 chr5 91675868 91676102 -107954048 - L2 LINE L2 -223 3049 2783 814 258 51 39 chr5 91676286 91676542 -107953608 + MIR SINE MIR 2 260 -2 191 240 104 31 chr5 91677108 91677204 -107952946 + MER5C DNA MER1_type 211 313 -11 1491 142 35 0 chr5 91677239 91677499 -107952651 - L1MA5A LINE L1 -3 6294 6026 21 71 0 0 chr5 91678693 91678735 -107951415 + AT_rich Low_complexity Low_complexity 1 42 0 225 0 0 0 chr5 91678985 91679010 -107951140 + (A)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr5 91681703 91681726 -107948424 + AT_rich Low_complexity Low_complexity 1 23 0 188 282 77 27 chr5 91682655 91682789 -107947361 + MIR SINE MIR 16 156 -52 538 218 26 51 chr5 91683443 91683599 -107946551 - MIR SINE MIR -56 206 55 1372 317 214 14 chr5 91683952 91684895 -107945255 - L3 LINE CR1 -1 1576 445 211 279 59 15 chr5 91686005 91686073 -107944077 + L2 LINE L2 3227 3297 -16 411 300 79 0 chr5 91687790 91687930 -107942220 - MIR SINE MIR -6 256 106 1482 188 7 33 chr5 91687942 91688246 -107941904 + AluJo SINE Alu 1 296 -16 391 338 27 7 chr5 91688524 91688672 -107941478 - L2 LINE L2 -5 3308 3158 249 33 0 0 chr5 91689623 91689653 -107940497 + (A)n Simple_repeat Simple_repeat 1 30 0 207 257 95 86 chr5 91691135 91691240 -107938910 - L3 LINE CR1 -87 1490 1385 434 15 0 62 chr5 91691640 91691729 -107938421 - L1PA2 LINE L1 0 6155 6091 1688 180 0 7 chr5 91692726 91693009 -107937141 + AluJb SINE Alu 1 281 -31 250 231 0 0 chr5 91693193 91693245 -107936905 + MIR3 SINE MIR 108 159 -49 2031 114 21 0 chr5 91693689 91693979 -107936171 + AluY SINE Alu 1 296 -15 435 52 0 0 chr5 91695543 91695601 -107934549 + (TG)n Simple_repeat Simple_repeat 1 58 0 231 136 15 30 chr5 91695601 91695667 -107934483 + GA-rich Low_complexity Low_complexity 2 66 0 30438 96 10 13 chr5 91696083 91701814 -107928336 + L1PA7 LINE L1 724 6458 -11 235 283 151 19 chr5 91701929 91702035 -107928115 - L2 LINE L2 -1 3271 3152 411 363 60 58 chr5 91702056 91702522 -107927628 + L2 LINE L2 2805 3271 -1 1035 192 5 24 chr5 91702683 91702891 -107927259 - MER3 DNA MER1_type -5 204 1 2016 56 25 32 chr5 91758774 91759058 -107871092 + AluSg SINE Alu 1 282 -28 2480 84 0 0 chr5 91760546 91760855 -107869295 - AluSc SINE Alu 0 309 1 1319 181 75 18 chr5 91760913 91761194 -107868956 - L1ME2 LINE L1 -2 6162 5866 1369 199 3 64 chr5 91761638 91761935 -107868215 - AluJo SINE Alu -33 279 1 342 304 30 42 chr5 91763454 91763633 -107866517 - MER5A DNA MER1_type 0 189 1 911 295 67 19 chr5 91764109 91764347 -107865803 + LTR16A LTR ERVL 1 259 -191 2718 167 50 15 chr5 91764347 91764803 -107865347 + MER70A LTR ERVL 1 472 0 911 295 67 19 chr5 91764803 91764876 -107865274 + LTR16A LTR ERVL 259 327 -123 29 60 0 0 chr5 91765263 91765313 -107864837 + AT_rich Low_complexity Low_complexity 1 50 0 260 202 0 96 chr5 91765925 91766029 -107864121 + AluSq SINE Alu 94 187 -116 624 296 64 94 chr5 91766734 91767350 -107862800 - L2 LINE L2 -1 3271 2665 1271 107 179 5 chr5 91767350 91767546 -107862604 - MER30 DNA MER1_type 0 230 1 624 296 64 94 chr5 91767546 91767645 -107862505 - L2 LINE L2 -607 2665 2565 23 0 0 0 chr5 91770869 91770892 -107859258 + AT_rich Low_complexity Low_complexity 1 23 0 2592 64 0 0 chr5 91771083 91771394 -107858756 + AluY SINE Alu 1 311 0 362 215 51 63 chr5 91771542 91771700 -107858450 + MER103 DNA DNA 11 166 0 258 152 65 0 chr5 91771739 91771785 -107858365 + L2 LINE L2 3223 3271 -1 2149 98 0 0 chr5 91771970 91772244 -107857906 - AluSg SINE Alu -10 300 27 29 0 0 0 chr5 91772244 91772273 -107857877 + AT_rich Low_complexity Low_complexity 1 29 0 214 326 0 22 chr5 91773669 91773758 -107856392 + GA-rich Low_complexity Low_complexity 5 91 0 21 36 0 0 chr5 91774274 91774302 -107855848 + AT_rich Low_complexity Low_complexity 1 28 0 215 231 0 0 chr5 91775234 91775286 -107854864 + T-rich Low_complexity Low_complexity 2 53 0 213 205 0 0 chr5 91776530 91776569 -107853581 + (CA)n Simple_repeat Simple_repeat 1 39 0 285 29 0 0 chr5 91781894 91781928 -107848222 + (CTG)n Simple_repeat Simple_repeat 3 36 0 249 280 0 0 chr5 91782329 91782404 -107847746 + (TA)n Simple_repeat Simple_repeat 2 76 0 228 254 30 0 chr5 91782421 91782488 -107847662 + L1MC4 LINE L1 6638 6706 -1336 * 239 286 0 31 chr5 91782429 91782527 -107847623 - L1MC4 LINE L1 -1330 6712 6618 21 36 0 0 chr5 91782734 91782762 -107847388 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr5 91783058 91783079 -107847071 + (A)n Simple_repeat Simple_repeat 1 21 0 215 336 103 0 chr5 91785402 91785509 -107844641 - MIR SINE MIR -58 204 87 269 207 134 0 chr5 91785747 91785829 -107844321 - MIR SINE MIR -123 139 47 205 364 98 0 chr5 91786735 91786867 -107843283 + MIR3 SINE MIR 7 151 -57 338 236 245 0 chr5 91786948 91787054 -107843096 + LTR16C LTR ERVL 355 486 -5 1682 167 38 115 chr5 91787092 91787513 -107842637 + MLT1C LTR MaLR 3 380 -87 1555 136 35 49 chr5 91787513 91787800 -107842350 - AluJb SINE Alu -14 298 16 1682 167 38 115 chr5 91787800 91787882 -107842268 + MLT1C LTR MaLR 380 467 0 841 191 27 37 chr5 91788110 91788298 -107841852 - MER5A DNA MER1_type 0 189 4 1239 223 4 0 chr5 91788563 91788837 -107841313 - L1PB4 LINE L1 -1 6155 5881 509 155 0 0 chr5 91788840 91788924 -107841226 - AluJ/FLAM SINE Alu -228 84 1 382 280 13 60 chr5 91789103 91789253 -107840897 - MIR SINE MIR -6 256 114 366 308 8 23 chr5 91789366 91789499 -107840651 - MER94 DNA DNA -2 132 2 497 365 51 38 chr5 91789530 91789900 -107840250 + L2 LINE L2 2895 3269 -3 376 303 152 5 chr5 91790226 91790424 -107839726 + MIR SINE MIR 36 262 0 232 152 0 22 chr5 91790701 91790747 -107839403 - LTR16A1 LTR ERVL 0 457 413 41 66 0 0 chr5 91791769 91791845 -107838305 + AT_rich Low_complexity Low_complexity 1 76 0 790 295 90 16 chr5 91791899 91792265 -107837885 - MLT1I LTR MaLR -16 393 1 27 62 0 0 chr5 91792336 91792384 -107837766 + AT_rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr5 91792691 91792714 -107837436 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 91792772 91792801 -107837349 + AT_rich Low_complexity Low_complexity 1 29 0 317 328 115 35 chr5 91793029 91793203 -107836947 + MIR SINE MIR 37 224 -38 352 254 58 43 chr5 91793416 91793554 -107836596 - MER112 DNA MER1_type -1 259 120 37 0 0 0 chr5 91793608 91793645 -107836505 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr5 91793742 91793766 -107836384 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr5 91796934 91796957 -107833193 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 747 129 0 0 chr5 91797038 91797154 -107832996 + L1MA4 LINE L1 6179 6294 -6 662 0 54 0 chr5 91797254 91797347 -107832803 + (TAGA)n Simple_repeat Simple_repeat 3 100 0 268 303 10 71 chr5 91797923 91798022 -107832128 + MIR SINE MIR 43 135 -73 277 103 0 0 chr5 91798096 91798135 -107832015 - MLT2F LTR ERVL 0 663 625 36 23 0 0 chr5 91798151 91798194 -107831956 + AT_rich Low_complexity Low_complexity 1 43 0 275 192 13 0 chr5 91798337 91798415 -107831735 + (TA)n Simple_repeat Simple_repeat 2 80 0 395 206 0 0 chr5 91798511 91798584 -107831566 - MLT2F LTR ERVL -587 76 4 186 43 0 0 chr5 91800154 91800177 -107829973 + (CTTG)n Simple_repeat Simple_repeat 2 24 0 278 365 74 46 chr5 91800291 91800771 -107829379 - L2 LINE L2 -79 3193 2708 250 165 177 51 chr5 91802754 91802833 -107827317 - L2 LINE L2 0 3272 3184 294 203 8 119 chr5 91803344 91803462 -107826688 + MIR3 SINE MIR 91 195 -13 355 282 51 99 chr5 91803770 91804043 -107826107 - MIR SINE MIR 0 262 3 21 0 0 0 chr5 91804068 91804089 -107826061 + AT_rich Low_complexity Low_complexity 1 21 0 519 120 65 0 chr5 91804853 91804945 -107825205 + MER113 DNA MER1_type? 296 393 -128 1717 121 0 0 chr5 91804951 91805243 -107824907 - AluSx SINE Alu 0 335 44 228 125 0 0 chr5 91806560 91806592 -107823558 + (GGAAA)n Simple_repeat Simple_repeat 2 33 0 324 229 0 0 chr5 91806599 91806682 -107823468 + GA-rich Low_complexity Low_complexity 2 84 0 306 132 0 0 chr5 91806673 91806726 -107823424 + (GAA)n Simple_repeat Simple_repeat 3 55 0 * 1034 63 0 53 chr5 91806731 91806920 -107823230 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 200 167 0 83 chr5 91806920 91806945 -107823205 + polypurine Low_complexity Low_complexity 1 22 -22 1628 182 0 20 chr5 91806945 91807241 -107822909 + AluJo SINE Alu 3 292 -20 200 167 0 83 chr5 91807241 91807263 -107822887 + polypurine Low_complexity Low_complexity 22 44 0 584 295 17 55 chr5 91807450 91807611 -107822539 - MIR SINE MIR -26 236 85 1523 168 177 0 chr5 91807611 91807921 -107822229 - MLT1A1 LTR MaLR 0 365 1 584 295 17 55 chr5 91807921 91807996 -107822154 - MIR SINE MIR -177 85 9 2003 165 28 6 chr5 91808209 91808566 -107821584 - MLT1A1 LTR MaLR 0 365 1 30 45 0 0 chr5 91809244 91809288 -107820862 + AT_rich Low_complexity Low_complexity 1 44 0 230 231 0 19 chr5 91810817 91810869 -107819281 + MLT1K LTR MaLR 462 512 -76 21 0 0 0 chr5 91811608 91811629 -107818521 + AT_rich Low_complexity Low_complexity 1 21 0 342 280 39 33 chr5 91812280 91812584 -107817566 + L1P4 LINE L1 5275 5596 -680 233 257 29 0 chr5 91812587 91812657 -107817493 + L1ME LINE L1 5630 5701 -420 484 220 27 85 chr5 91813281 91813504 -107816646 + L1MC5 LINE L1 7701 7910 -51 460 268 82 37 chr5 91813818 91814061 -107816089 + L1ME LINE L1 5508 5761 -360 261 285 311 11 chr5 91814131 91814398 -107815752 - L2 LINE L2 -9 3304 2958 2393 80 3 10 chr5 91814582 91814895 -107815255 - AluY SINE Alu 0 311 1 2132 87 3 21 chr5 91815392 91815703 -107814447 + AluSx SINE Alu 1 306 0 314 311 48 19 chr5 91815776 91815879 -107814271 - L2 LINE L2 -18 3295 3190 2251 118 0 3 chr5 91815927 91816240 -107813910 - AluSx SINE Alu 0 312 1 434 179 26 0 chr5 91816256 91816334 -107813816 - L2 LINE L2 -4 3309 3230 1632 186 3 28 chr5 91816395 91816708 -107813442 + AluJb SINE Alu 1 306 0 213 94 0 0 chr5 91818416 91818448 -107811702 + (TG)n Simple_repeat Simple_repeat 2 33 0 726 256 19 47 chr5 91818621 91818832 -107811318 + MER63A DNA MER1_type 2 206 -4 293 207 0 0 chr5 91819795 91819853 -107810297 - MLT1G LTR MaLR -2 588 531 402 239 128 0 chr5 91819975 91820092 -107810058 - FLAM_C SINE Alu -1 132 1 474 326 19 13 chr5 91820121 91820304 -107809846 - MLT1H1 LTR MaLR -286 304 113 431 19 0 0 chr5 91820311 91820363 -107809787 + MADE1 DNA Mariner 29 80 0 1605 184 3 16 chr5 91820434 91820738 -107809412 - AluJo SINE Alu -2 310 11 426 224 8 37 chr5 91820763 91820784 -107809366 - L1MA10 LINE L1 -38 6296 6276 2796 220 71 10 chr5 91820784 91821669 -107808481 - L1ME1 LINE L1 -45 6190 5250 3638 184 68 63 chr5 91821680 91822652 -107807498 - L1MD2 LINE L1 -12 6230 5254 4397 259 98 19 chr5 91822663 91824355 -107805795 - L1ME1 LINE L1 -4533 1863 40 2551 85 31 0 chr5 91824408 91824760 -107805390 + L1PA7 LINE L1 5792 6154 0 229 222 49 25 chr5 91824864 91824945 -107805205 - MIR SINE MIR -49 213 131 348 287 23 11 chr5 91824946 91825033 -107805117 + L2 LINE L2 3190 3277 -36 325 344 47 0 chr5 91825056 91825184 -107804966 - MIR SINE MIR -128 134 1 4083 174 57 38 chr5 91825231 91826047 -107804103 + L1MB2 LINE L1 4899 5743 -428 2388 123 33 6 chr5 91826047 91826412 -107803738 - THE1C LTR MaLR 0 375 1 4083 174 57 38 chr5 91826412 91826850 -107803300 + L1MB2 LINE L1 5743 6171 0 2164 123 3 3 chr5 91827565 91827866 -107802284 - AluSx SINE Alu -11 301 1 258 332 36 77 chr5 91827973 91828169 -107801981 + MIR3 SINE MIR 21 208 0 485 250 50 7 chr5 91828243 91828383 -107801767 - MLT1L LTR MaLR -4 611 466 642 238 116 50 chr5 91828427 91828746 -107801404 - MLT1L LTR MaLR -239 376 37 538 217 17 17 chr5 91831037 91831152 -107798998 + MER94 DNA DNA 20 134 0 22 20 8 0 chr5 91833639 91833709 -107796441 + AT_rich Low_complexity Low_complexity 1 29 0 330 67 0 0 chr5 91834183 91834228 -107795922 + (CA)n Simple_repeat Simple_repeat 2 46 0 344 328 51 23 chr5 91834863 91835040 -107795110 + MIR SINE MIR 51 232 -30 245 292 18 35 chr5 91837886 91837999 -107792151 + GA-rich Low_complexity Low_complexity 5 115 0 23 0 0 0 chr5 91838744 91838767 -107791383 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 91840141 91840162 -107789988 + AT_rich Low_complexity Low_complexity 1 21 0 200 255 39 0 chr5 91840180 91840231 -107789919 - L2 LINE L2 -4 3309 3257 22 111 0 0 chr5 91841439 91841538 -107788612 + AT_rich Low_complexity Low_complexity 1 99 0 237 274 0 66 chr5 91848863 91848969 -107781181 + CT-rich Low_complexity Low_complexity 3 101 0 189 0 0 0 chr5 91851352 91851373 -107778777 + (A)n Simple_repeat Simple_repeat 1 21 0 314 344 25 43 chr5 91851925 91852088 -107778062 + MIR SINE MIR 59 218 -44 648 291 40 89 chr5 91853120 91853228 -107776922 + MLT1I LTR MaLR 63 175 -234 2231 104 0 3 chr5 91853228 91853526 -107776624 + AluSg1 SINE Alu 1 297 -12 648 291 40 89 chr5 91853526 91853765 -107776385 + MLT1I LTR MaLR 175 393 -16 1150 222 9 0 chr5 91853765 91853981 -107776169 + Charlie1b DNA MER1_type 1 218 -305 1709 193 36 25 chr5 91853988 91854350 -107775800 + MLT1A2 LTR MaLR 9 374 0 819 197 66 38 chr5 91854350 91854630 -107775520 + Charlie1b DNA MER1_type 233 520 -3 215 299 31 79 chr5 91855240 91855367 -107774783 + L2 LINE L2 3134 3254 -18 348 337 104 20 chr5 91855871 91856073 -107774077 - MIR SINE MIR -38 224 6 851 96 0 0 chr5 91856586 91856701 -107773449 - L1PA7 LINE L1 -4 6150 6036 212 304 0 0 chr5 91857472 91857518 -107772632 + L2 LINE L2 3182 3227 -86 285 271 118 0 chr5 91857817 91857902 -107772248 + MIR SINE MIR 1 95 -167 21 57 0 0 chr5 91857980 91858015 -107772135 + AT_rich Low_complexity Low_complexity 1 35 0 2168 113 3 3 chr5 91858740 91859033 -107771117 - AluSx SINE Alu -19 293 1 229 327 18 26 chr5 91859413 91859526 -107770624 + MER5A DNA MER1_type 9 120 -69 355 306 43 8 chr5 91859640 91859819 -107770331 + MIR SINE MIR 2 237 -25 280 189 19 0 chr5 91859825 91859878 -107770272 + MER5A DNA MER1_type 136 189 0 245 289 21 84 chr5 91860442 91860552 -107769598 + L2 LINE L2 2328 2423 -891 6753 45 4 0 chr5 91860552 91861378 -107768772 + L1PA5 LINE L1 5324 6152 -2 245 289 21 84 chr5 91861378 91861457 -107768693 + L2 LINE L2 2423 2505 -809 352 304 30 42 chr5 91861859 91862038 -107768112 - MER5A DNA MER1_type 0 189 1 1513 262 47 27 chr5 91862514 91862752 -107767398 + LTR16A LTR ERVL 1 252 -198 2545 162 50 15 chr5 91862752 91863208 -107766942 + MER70A LTR ERVL 1 472 0 1513 262 47 27 chr5 91863208 91863370 -107766780 + LTR16A LTR ERVL 252 409 -41 246 303 82 31 chr5 91863400 91863921 -107766229 + HAL1 LINE L1 961 1508 -999 1505 201 74 39 chr5 91863944 91864307 -107765843 - MLT1D LTR MaLR -129 376 1 216 328 67 97 chr5 91864642 91865117 -107765033 + L2 LINE L2 2812 3272 0 270 0 0 0 chr5 91865224 91865254 -107764896 + (CA)n Simple_repeat Simple_repeat 2 31 0 542 296 0 31 chr5 91865668 91865827 -107764323 + MER5B DNA MER1_type 24 177 -1 249 190 52 35 chr5 91868940 91868998 -107761152 - MIR3 SINE MIR -25 183 125 399 287 28 0 chr5 91869303 91869411 -107760739 + L2 LINE L2 3199 3309 -4 371 363 94 48 chr5 91869469 91869713 -107760437 + L2 LINE L2 2473 2704 -568 1450 219 141 18 chr5 91869713 91870161 -107759989 - MLT1D LTR MaLR -2 503 1 371 363 94 48 chr5 91870161 91870597 -107759553 + L2 LINE L2 2704 3192 -80 305 23 0 23 chr5 91870597 91870640 -107759510 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 371 363 94 48 chr5 91870640 91870725 -107759425 + L2 LINE L2 3192 3272 0 22 0 0 0 chr5 91871921 91871943 -107758207 + AT_rich Low_complexity Low_complexity 1 22 0 342 0 0 0 chr5 91872669 91872707 -107757443 + (TG)n Simple_repeat Simple_repeat 2 39 0 1882 131 44 7 chr5 91873107 91873422 -107756728 + AluSx SINE Alu 1 325 0 927 227 45 33 chr5 91873567 91873809 -107756341 + MIR SINE MIR 2 246 -16 874 205 62 66 chr5 91874002 91874246 -107755904 + MIR SINE MIR 11 253 -9 210 315 246 14 chr5 91875386 91875735 -107754415 + L2 LINE L2 2071 2500 -814 353 229 179 105 chr5 91875808 91876190 -107753960 + MLT1H1 LTR MaLR 138 553 -2 197 211 18 0 chr5 91876413 91876470 -107753680 + GA-rich Low_complexity Low_complexity 3 60 0 499 264 88 6 chr5 91877778 91877937 -107752213 + MIR SINE MIR 16 187 -75 882 251 0 0 chr5 91877974 91878153 -107751997 + MER5A DNA MER1_type 1 179 -10 394 285 82 48 chr5 91878137 91878344 -107751806 + MIR SINE MIR 49 262 0 * 313 294 0 0 chr5 91878351 91878419 -107751731 - L2 LINE L2 -42 3230 3163 21424 171 13 40 chr5 91878464 91885106 -107745044 + L1PA11 LINE L1 13 7612 0 860 288 115 26 chr5 91885123 91885772 -107744378 - L2 LINE L2 -136 3177 2461 278 227 120 27 chr5 91885872 91885947 -107744203 + MIR SINE MIR 51 132 -76 437 82 0 14 chr5 91886071 91886144 -107744006 + L1P LINE L1 4678 4749 -1397 376 327 124 41 chr5 91886582 91886848 -107743302 + L2 LINE L2 2551 2838 -476 595 234 8 0 chr5 91886867 91886995 -107743155 - L2 LINE L2 -372 2942 2814 234 288 0 0 chr5 91887269 91887328 -107742822 - L2 LINE L2 0 3272 3214 191 349 0 0 chr5 91888794 91888857 -107741293 - MIR3 SINE MIR -35 173 111 301 313 134 9 chr5 91889504 91889616 -107740534 - L2 LINE L2 -1 3271 3146 243 0 0 0 chr5 91890076 91890103 -107740047 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 22 0 0 0 chr5 91890433 91890455 -107739695 + AT_rich Low_complexity Low_complexity 1 22 0 438 86 0 0 chr5 91892188 91892246 -107737904 - Charlie3 DNA MER1_type 0 2710 2653 2423 74 3 3 chr5 91892643 91892954 -107737196 - AluY SINE Alu 0 311 1 243 193 0 18 chr5 91893148 91893205 -107736945 + L1MDa LINE L1 1871 1926 -4614 339 98 0 0 chr5 91893329 91893380 -107736770 + MADE1 DNA Mariner 2 52 -28 1360 258 27 48 chr5 91893444 91893882 -107736268 + L2 LINE L2 2350 2778 -536 1071 99 0 0 chr5 91893882 91894023 -107736127 + AluSp/q SINE Alu 172 312 -1 1156 230 135 60 chr5 91894023 91894536 -107735614 + L2 LINE L2 2769 3313 0 21 0 0 0 chr5 91895720 91895741 -107734409 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr5 91895964 91895989 -107734161 + (A)n Simple_repeat Simple_repeat 1 25 0 425 302 49 49 chr5 91896157 91896362 -107733788 + MIR3 SINE MIR 4 208 0 219 200 0 33 chr5 91896799 91896859 -107733291 + T-rich Low_complexity Low_complexity 4 61 0 2485 56 0 0 chr5 91897212 91897516 -107732634 + AluY SINE Alu 1 304 -7 453 313 37 18 chr5 91897591 91897808 -107732342 + LTR16A LTR ERVL 59 279 -171 281 238 59 10 chr5 91897807 91897908 -107732242 + LTR16A LTR ERVL 369 491 0 * 309 325 48 32 chr5 91897978 91898166 -107731984 + MER117 DNA MER1_type 7 197 0 486 234 16 16 chr5 91898528 91898652 -107731498 + MLT1K LTR MaLR 462 585 -3 578 327 109 9 chr5 91899150 91899370 -107730780 - MIR SINE MIR 0 262 21 1904 176 40 6 chr5 91900315 91900668 -107729482 + MLT1A1 LTR MaLR 1 365 0 1655 164 167 14 chr5 91900924 91901108 -107729042 + MSTA LTR MaLR 1 155 -273 198 0 0 0 chr5 91901108 91901130 -107729020 + (TC)n Simple_repeat Simple_repeat 1 22 0 1655 164 167 14 chr5 91901130 91901316 -107728834 + MSTA LTR MaLR 155 428 0 190 311 0 0 chr5 91901532 91901577 -107728573 - L2 LINE L2 -38 3234 3190 1209 162 46 11 chr5 91901580 91901864 -107728286 - MER33 DNA MER1_type -14 310 17 1738 184 58 66 chr5 91901946 91902478 -107727672 - L1MC5 LINE L1 -737 7224 6697 183 80 0 0 chr5 91902488 91902513 -107727637 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1972 138 43 0 chr5 91902513 91902795 -107727355 - AluSg SINE Alu -16 294 1 282 331 30 35 chr5 91902820 91902989 -107727161 - L2 LINE L2 -1203 2111 1944 1206 276 186 23 chr5 91902992 91903568 -107726582 + L2 LINE L2 2116 2785 -529 695 236 82 64 chr5 91903585 91903827 -107726323 + L1MDa LINE L1 34 287 -6253 312 91 0 0 chr5 91903827 91903871 -107726279 + (CA)n Simple_repeat Simple_repeat 1 44 0 695 236 82 64 chr5 91903871 91904005 -107726145 + L1MDa LINE L1 287 417 -6123 3290 212 60 13 chr5 91904252 91905344 -107724806 + L1MDa LINE L1 908 2025 -4515 629 305 48 4 chr5 91905406 91905655 -107724495 + MLT1L LTR MaLR 339 598 -17 325 230 209 88 chr5 91905689 91905745 -107724405 + L1ME4a LINE L1 5635 5683 -438 2290 108 0 0 chr5 91905745 91906052 -107724098 + AluSx SINE Alu 1 307 -5 325 230 209 88 chr5 91906052 91906234 -107723916 + L1ME4a LINE L1 5683 5902 -219 225 277 102 7 chr5 91906244 91906381 -107723769 + L1ME4a LINE L1 5969 6118 -3 459 0 0 0 chr5 91906548 91906599 -107723551 + (TG)n Simple_repeat Simple_repeat 2 52 0 4439 166 100 91 chr5 91906816 91907506 -107722644 + L1MC3 LINE L1 5838 6520 -1265 7072 50 52 21 chr5 91907506 91909105 -107721045 + SVA Other Other 1 1372 -14 4439 166 100 91 chr5 91909105 91909467 -107720683 + L1MC3 LINE L1 6520 6910 -875 339 25 0 0 chr5 91909467 91909507 -107720643 + (CA)n Simple_repeat Simple_repeat 2 41 0 4439 166 100 91 chr5 91909507 91909742 -107720408 + L1MC3 LINE L1 6910 7141 -644 * 36200 88 5 6 chr5 91909739 91915887 -107714263 - L1PA6 LINE L1 -4 6150 13 3325 181 12 1 chr5 91915897 91916550 -107713600 + L1MC3 LINE L1 7125 7784 -1 235 313 170 27 chr5 91916693 91916805 -107713345 + MIR3 SINE MIR 66 193 -15 211 359 23 23 chr5 91916816 91916944 -107713206 + MIR3 SINE MIR 58 185 -23 414 272 8 32 chr5 91917045 91917170 -107712980 + L2 LINE L2 3192 3313 0 450 298 23 47 chr5 91917733 91917904 -107712246 + MER5A DNA MER1_type 1 167 -22 25 0 0 0 chr5 91918064 91918089 -107712061 + AT_rich Low_complexity Low_complexity 1 25 0 1962 130 25 0 chr5 91918401 91918678 -107711472 - AluSx SINE Alu -17 295 12 1587 184 3 44 chr5 91918812 91919127 -107711023 - AluJo SINE Alu -10 302 1 352 314 95 9 chr5 91919777 91919882 -107710268 + L2 LINE L2 3149 3262 -10 2642 178 16 12 chr5 91920127 91920189 -107709961 - MLT2B1 LTR ERVL -5 515 455 2076 94 0 7 chr5 91920189 91920475 -107709675 + AluY SINE Alu 1 284 -27 540 0 0 0 chr5 91920475 91920535 -107709615 + (TA)n Simple_repeat Simple_repeat 2 61 0 2642 178 16 12 chr5 91920535 91920977 -107709173 - MLT2B1 LTR ERVL -64 456 8 2344 91 0 19 chr5 91921054 91921362 -107708788 + AluSg SINE Alu 2 303 -7 459 328 46 13 chr5 91921951 91922189 -107707961 + L1MC/D LINE L1 5526 5771 -2037 448 244 0 0 chr5 91922239 91922358 -107707792 - L1PB4 LINE L1 -1 6155 6037 2194 87 31 0 chr5 91922775 91923061 -107707089 - AluSq SINE Alu -18 295 1 207 228 140 0 chr5 91923628 91923685 -107706465 + L2 LINE L2 3186 3250 -22 686 299 54 96 chr5 91923890 91924371 -107705779 + L2 LINE L2 2834 3294 -19 263 261 0 14 chr5 91924536 91924605 -107705545 + MIR SINE MIR 120 187 -75 1925 163 3 0 chr5 91924705 91924994 -107705156 + AluJb SINE Alu 1 290 -22 1518 220 0 23 chr5 91925102 91925411 -107704739 + AluJo SINE Alu 1 302 -10 279 0 0 0 chr5 91926694 91926725 -107703425 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 502 104 0 0 chr5 91927475 91927542 -107702608 + AluS SINE Alu 3 69 -244 220 324 0 14 chr5 91928401 91928475 -107701675 + MIR SINE MIR 151 223 -39 23 33 0 0 chr5 91929338 91929368 -107700782 + AT_rich Low_complexity Low_complexity 1 30 0 1916 129 15 0 chr5 91929829 91930101 -107700049 + AluSq SINE Alu 1 276 -37 2890 194 31 84 chr5 91930109 91930715 -107699435 + L1ME1 LINE L1 4904 5420 -746 1905 169 0 3 chr5 91930715 91931010 -107699140 + AluSx SINE Alu 1 294 -18 2890 194 31 84 chr5 91931010 91931630 -107698520 + L1ME1 LINE L1 5420 6071 -95 916 267 62 23 chr5 91931647 91931954 -107698196 + ERVL LTR ERVL 5094 5412 -352 1818 272 65 22 chr5 91931979 91932581 -107697569 - ERVL LTR ERVL -755 5009 4382 1072 278 61 16 chr5 91932649 91932962 -107697188 - ERVL LTR ERVL -1489 4275 3949 2455 167 0 0 chr5 91933035 91933418 -107696732 + MLT1B LTR MaLR 3 385 -5 1217 312 38 44 chr5 91933612 91934244 -107695906 - ERVL LTR ERVL -4317 1447 820 388 343 48 45 chr5 91934299 91934567 -107695583 - ERVL LTR ERVL -5050 612 336 184 243 136 129 chr5 91936123 91936263 -107693887 + MER5B DNA MER1_type 1 141 -37 21 36 0 0 chr5 91936305 91936333 -107693817 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr5 91936473 91936509 -107693641 + AT_rich Low_complexity Low_complexity 1 36 0 323 185 15 15 chr5 91937355 91937420 -107692730 + MIR SINE MIR 157 221 -41 1486 161 16 170 chr5 91937482 91937912 -107692238 + MLT1A1 LTR MaLR 2 365 0 277 274 147 0 chr5 91938935 91939037 -107691113 + MIR SINE MIR 105 221 -41 925 224 22 14 chr5 91940225 91940448 -107689702 - AluJo SINE Alu -7 305 81 869 184 60 60 chr5 91940498 91940715 -107689435 + AluJo SINE Alu 4 220 -92 736 190 0 0 chr5 91941385 91941501 -107688649 - FLAM_A SINE Alu -15 127 12 258 164 0 45 chr5 91941548 91941615 -107688535 + FLAM SINE Alu 70 133 0 2309 89 16 13 chr5 91941652 91941966 -107688184 + L1PB1 LINE L1 5827 6141 -10 1449 121 27 136 chr5 91941966 91942304 -107687846 - AluYb8 SINE Alu -17 301 1 298 287 228 12 chr5 91942600 91942767 -107687383 + L2 LINE L2 3008 3210 -103 624 296 64 93 chr5 91943693 91943792 -107686358 + L2 LINE L2 2565 2665 -607 1271 107 179 5 chr5 91943792 91943988 -107686162 + MER30 DNA MER1_type 1 230 0 624 296 64 93 chr5 91943988 91944603 -107685547 + L2 LINE L2 2665 3271 -1 2195 116 0 0 chr5 91945025 91945335 -107684815 - AluSx SINE Alu 0 312 3 22 56 0 0 chr5 91946509 91946545 -107683605 + AT_rich Low_complexity Low_complexity 1 36 0 495 234 0 28 chr5 91946892 91946999 -107683151 - L2 LINE L2 0 3313 3210 27 0 0 0 chr5 91953085 91953112 -107677038 + AT_rich Low_complexity Low_complexity 1 27 0 28 61 0 0 chr5 91954628 91954677 -107675473 + AT_rich Low_complexity Low_complexity 1 49 0 201 147 0 0 chr5 91960055 91960089 -107670061 + (CAG)n Simple_repeat Simple_repeat 2 35 0 189 0 0 0 chr5 91964912 91964933 -107665217 + (CCA)n Simple_repeat Simple_repeat 3 23 0 23 0 0 0 chr5 91965165 91965188 -107664962 + GC_rich Low_complexity Low_complexity 1 23 0 311 312 0 0 chr5 91965935 91966044 -107664106 + T-rich Low_complexity Low_complexity 1 109 0 297 0 0 0 chr5 91966389 91966422 -107663728 + (TG)n Simple_repeat Simple_repeat 1 33 0 221 83 28 0 chr5 91967604 91967640 -107662510 + (CA)n Simple_repeat Simple_repeat 2 38 0 893 42 8 0 chr5 91968601 91968719 -107661431 + (TCC)n Simple_repeat Simple_repeat 2 120 0 24 0 0 0 chr5 91969300 91969324 -107660826 + AT_rich Low_complexity Low_complexity 1 24 0 283 264 0 0 chr5 91970760 91970832 -107659318 + C-rich Low_complexity Low_complexity 1 72 0 196 146 21 21 chr5 91971094 91971142 -107659008 + GA-rich Low_complexity Low_complexity 1 48 0 423 132 0 0 chr5 91972338 91972406 -107657744 + (T)n Simple_repeat Simple_repeat 1 68 0 202 278 0 15 chr5 91973529 91973662 -107656488 + (TA)n Simple_repeat Simple_repeat 2 132 0 21 0 0 0 chr5 91974525 91974546 -107655604 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 91974647 91974668 -107655482 + AT_rich Low_complexity Low_complexity 1 21 0 293 0 27 0 chr5 91975590 91975627 -107654523 + (TG)n Simple_repeat Simple_repeat 2 39 0 384 77 0 0 chr5 91976262 91976314 -107653836 + (TG)n Simple_repeat Simple_repeat 2 53 0 387 0 0 0 chr5 91977040 91977083 -107653067 + (TC)n Simple_repeat Simple_repeat 2 44 0 202 109 31 47 chr5 91977134 91977198 -107652952 + GA-rich Low_complexity Low_complexity 4 66 0 264 59 0 0 chr5 91977261 91977295 -107652855 + (GGA)n Simple_repeat Simple_repeat 2 35 0 396 0 0 0 chr5 91977829 91977873 -107652277 + (TG)n Simple_repeat Simple_repeat 2 45 0 207 0 0 0 chr5 91978404 91978427 -107651723 + (CA)n Simple_repeat Simple_repeat 2 24 0 189 0 0 0 chr5 91982647 91982668 -107647482 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 258 32 0 0 chr5 91982698 91982729 -107647421 + (CA)n Simple_repeat Simple_repeat 2 32 0 2453 52 16 19 chr5 91987153 91987512 -107642638 + AluSg SINE Alu 1 358 0 410 312 32 69 chr5 91988214 91988432 -107641718 - MIR SINE MIR -4 258 49 300 276 11 11 chr5 91989441 91989528 -107640622 + CT-rich Low_complexity Low_complexity 1 87 0 338 292 231 15 chr5 91990652 91990977 -107639173 + L2 LINE L2 2847 3241 -72 272 231 25 8 chr5 91991944 91992065 -107638085 + CT-rich Low_complexity Low_complexity 4 126 0 694 265 27 11 chr5 91993310 91993495 -107636655 + MIR SINE MIR 53 240 -22 2407 121 55 36 chr5 91993650 91994070 -107636080 + MSTA LTR MaLR 1 428 0 885 148 7 0 chr5 91995151 91995286 -107634864 + FRAM SINE Alu 39 174 -2 2085 97 7 0 chr5 91995714 91996017 -107634133 - AluSx SINE Alu 0 305 1 21 0 0 0 chr5 91996031 91996052 -107634098 + AT_rich Low_complexity Low_complexity 1 21 0 1237 77 16 6 chr5 91997038 91997220 -107632930 + L1PB1 LINE L1 5843 6026 -125 29 90 0 0 chr5 91997222 91997300 -107632850 + AT_rich Low_complexity Low_complexity 1 78 0 1880 155 6 32 chr5 91997305 91997621 -107632529 + AluJo SINE Alu 1 308 -4 1904 157 3 7 chr5 91997794 91998088 -107632062 + AluSx SINE Alu 1 293 -19 379 289 10 0 chr5 91998584 91998681 -107631469 - L2 LINE L2 0 3313 3216 4717 276 49 10 chr5 91998682 92000139 -107630011 - HERVL40 LTR ERVL -1273 4257 2745 620 277 43 26 chr5 92000328 92000559 -107629591 - HERVL40 LTR ERVL -3934 1596 1362 619 233 40 7 chr5 92001009 92001159 -107628991 - HERVL40 LTR ERVL -4441 1089 935 1454 226 41 25 chr5 92001467 92001835 -107628315 - LTR40c LTR ERVL -25 440 67 805 142 4 2 chr5 92001836 92002071 -107628079 + AluSx SINE Alu 1 271 -39 334 209 0 0 chr5 92002093 92002160 -107627990 - LTR40c LTR ERVL -398 67 1 29 60 0 0 chr5 92002204 92002254 -107627896 + AT_rich Low_complexity Low_complexity 1 50 0 229 157 0 39 chr5 92002419 92002470 -107627680 + L1MC4 LINE L1 6654 6702 -1340 290 283 186 7 chr5 92002538 92002683 -107627467 - MIR SINE MIR -77 185 15 24 53 0 0 chr5 92002701 92002739 -107627411 + AT_rich Low_complexity Low_complexity 1 38 0 234 175 35 18 chr5 92003254 92003311 -107626839 + (TATATG)n Simple_repeat Simple_repeat 1 58 0 2499 81 0 0 chr5 92004300 92004609 -107625541 - AluSc SINE Alu 0 309 1 1201 182 75 14 chr5 92004667 92004947 -107625203 - L1ME2 LINE L1 -2 6162 5866 1592 196 4 11 chr5 92005391 92005672 -107624478 - AluJo SINE Alu -33 279 1 2147 96 9 40 chr5 92006636 92006958 -107623192 - AluSx SINE Alu 0 312 1 439 256 35 50 chr5 92007016 92007215 -107622935 - L1MC4a LINE L1 -1858 5950 5755 443 237 7 44 chr5 92009235 92009370 -107620780 - MER45 DNA AcHobo 0 1581 1452 * 573 222 71 101 chr5 92009357 92009555 -107620595 - MER45 DNA AcHobo -1389 192 1 200 360 140 0 chr5 92009730 92009844 -107620306 + L2 LINE L2 3143 3272 0 24 0 0 0 chr5 92012651 92012675 -107617475 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 92013102 92013123 -107617027 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr5 92013945 92013981 -107616169 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr5 92014241 92014266 -107615884 + AT_rich Low_complexity Low_complexity 1 25 0 26 0 0 0 chr5 92014281 92014307 -107615843 + AT_rich Low_complexity Low_complexity 1 26 0 27 0 0 0 chr5 92020775 92020802 -107609348 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 92021995 92022016 -107608134 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 92023832 92023854 -107606296 + AT_rich Low_complexity Low_complexity 1 22 0 300 27 0 0 chr5 92026879 92026916 -107603234 + (T)n Simple_repeat Simple_repeat 1 37 0 2927 6 0 0 chr5 92028530 92028846 -107601304 + AluYb8 SINE Alu 1 316 -2 196 308 15 0 chr5 92030652 92030717 -107599433 + MIR SINE MIR 196 261 -1 * 736 244 27 50 chr5 92030703 92030924 -107599226 - MIR SINE MIR -45 217 2 21 36 0 0 chr5 92031489 92031517 -107598633 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr5 92031769 92031811 -107598339 + AT_rich Low_complexity Low_complexity 1 42 0 339 25 0 0 chr5 92032569 92032609 -107597541 + (TG)n Simple_repeat Simple_repeat 1 40 0 319 274 19 28 chr5 92032802 92032908 -107597242 - MIR SINE MIR -109 153 49 344 258 0 32 chr5 92033611 92033704 -107596446 - MIR SINE MIR -4 258 169 35 0 0 0 chr5 92035465 92035500 -107594650 + AT_rich Low_complexity Low_complexity 1 35 0 2088 107 7 3 chr5 92036610 92036901 -107593249 + AluSx SINE Alu 1 292 -20 438 303 83 83 chr5 92037477 92037791 -107592359 - L2 LINE L2 -2 3270 2957 1796 151 0 20 chr5 92037866 92038158 -107591992 + AluJo SINE Alu 1 286 -26 423 253 11 0 chr5 92038205 92038300 -107591850 + MIR SINE MIR 89 184 -78 2460 51 0 0 chr5 92041758 92042052 -107588098 + AluY SINE Alu 1 294 -17 1684 160 23 33 chr5 92042217 92042517 -107587633 - AluJb SINE Alu -15 297 1 238 257 0 27 chr5 92042678 92042752 -107587398 - L1MC5 LINE L1 -48 7913 7842 23 0 0 0 chr5 92044367 92044390 -107585760 + GC_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 92045396 92045417 -107584733 + AT_rich Low_complexity Low_complexity 1 21 0 255 31 0 0 chr5 92046425 92046457 -107583693 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 229 204 0 0 chr5 92047170 92047214 -107582936 + MIR SINE MIR 217 260 -2 24 0 0 0 chr5 92047256 92047280 -107582870 + AT_rich Low_complexity Low_complexity 1 24 0 897 232 78 31 chr5 92048688 92049221 -107580929 + L1ME LINE L1 5004 5553 -613 649 295 19 16 chr5 92051622 92051941 -107578209 + L1MD2 LINE L1 4289 4608 -1538 219 36 0 0 chr5 92051951 92051979 -107578171 + (TG)n Simple_repeat Simple_repeat 2 29 0 2919 109 17 0 chr5 92052013 92052739 -107577411 + L1PA8A LINE L1 4942 5675 -456 3320 204 28 47 chr5 92052776 92053831 -107576319 + L1MD2 LINE L1 5079 6116 -243 256 33 0 0 chr5 92053835 92053865 -107576285 - MLT2A1 LTR ERVL -8 436 407 396 59 0 0 chr5 92053865 92053916 -107576234 + (TG)n Simple_repeat Simple_repeat 1 51 0 242 28 0 28 chr5 92053927 92053963 -107576187 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 237 192 41 41 chr5 92053965 92054038 -107576112 - AluSp/q SINE Alu -21 282 210 2759 273 95 29 chr5 92054662 92055261 -107574889 + L1MEc LINE L1 499 1057 -5339 6689 38 12 1 chr5 92055261 92056088 -107574062 + L1PA4 LINE L1 5318 6153 -2 2759 273 95 29 chr5 92056088 92056889 -107573261 + L1MEc LINE L1 1057 2013 -4383 1714 148 3 68 chr5 92056889 92057213 -107572937 - AluSq SINE Alu -10 303 1 2759 273 95 29 chr5 92057213 92057350 -107572800 + L1MEc LINE L1 2013 2139 -4257 654 133 0 9 chr5 92057334 92057447 -107572703 - L1MA7 LINE L1 -141 6150 6039 * 244 210 0 45 chr5 92057592 92057690 -107572460 - L1MB8 LINE L1 -28 6156 6064 23 0 0 0 chr5 92058065 92058088 -107572062 + AT_rich Low_complexity Low_complexity 1 23 0 610 297 59 5 chr5 92059062 92059264 -107570886 + MIR SINE MIR 50 262 0 318 323 50 10 chr5 92061585 92061684 -107568466 - L2 LINE L2 -5 3308 3206 317 208 0 0 chr5 92061865 92061918 -107568232 + MER45 DNA AcHobo 1529 1581 0 575 121 9 95 chr5 92062644 92062760 -107567390 + THE1C LTR MaLR 1 106 -269 1921 118 10 10 chr5 92062831 92063135 -107567015 + THE1C LTR MaLR 72 375 0 22 0 0 0 chr5 92064938 92064960 -107565190 + AT_rich Low_complexity Low_complexity 1 22 0 321 136 358 25 chr5 92064980 92065061 -107565089 + AluJb SINE Alu 195 302 0 1227 181 30 9 chr5 92065228 92065460 -107564690 + L1MB7 LINE L1 5398 5634 -550 823 240 32 0 chr5 92065459 92065680 -107564470 + L1MB7 LINE L1 5879 6106 -78 * 23 0 0 0 chr5 92065980 92066003 -107564147 + AT_rich Low_complexity Low_complexity 1 23 0 221 56 0 28 chr5 92066066 92066102 -107564048 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2023 168 62 74 chr5 92066448 92066683 -107563467 + L1MA9 LINE L1 5789 6025 -287 2149 127 0 3 chr5 92066683 92066997 -107563153 + AluSq SINE Alu 1 313 0 2023 168 62 74 chr5 92066997 92067291 -107562859 + L1MA9 LINE L1 6025 6312 0 2313 83 3 10 chr5 92067565 92067878 -107562272 + AluY SINE Alu 1 311 0 21 57 0 0 chr5 92068127 92068162 -107561988 + AT_rich Low_complexity Low_complexity 1 35 0 348 0 0 0 chr5 92068252 92068294 -107561856 + L1PA6 LINE L1 6109 6150 -4 23 0 0 0 chr5 92068308 92068331 -107561819 + AT_rich Low_complexity Low_complexity 1 23 0 26 64 0 0 chr5 92068372 92068419 -107561731 + AT_rich Low_complexity Low_complexity 1 47 0 209 269 0 0 chr5 92069082 92069134 -107561016 + (CAT)n Simple_repeat Simple_repeat 2 53 0 200 125 25 0 chr5 92069167 92069207 -107560943 + A-rich Low_complexity Low_complexity 3 43 0 991 327 123 20 chr5 92069696 92070377 -107559773 - L1M2b LINE L1 -6332 877 136 550 161 22 79 chr5 92070440 92070583 -107559567 - MSTB2 LTR MaLR -58 380 222 482 321 37 15 chr5 92070979 92071247 -107558903 + L1MC4 LINE L1 6783 7056 -986 988 186 48 90 chr5 92071612 92071902 -107558248 - AluSg SINE Alu -11 299 22 223 96 39 0 chr5 92072344 92072396 -107557754 + (TA)n Simple_repeat Simple_repeat 2 55 0 608 117 43 0 chr5 92073454 92073548 -107556602 - THE1C LTR MaLR 0 375 278 4261 129 53 71 chr5 92073550 92074353 -107555797 - THE1C-int LTR MaLR -789 791 3 2434 101 18 52 chr5 92074355 92074743 -107555407 - THE1C LTR MaLR 0 375 1 266 326 43 0 chr5 92076775 92076867 -107553283 - MIR SINE MIR -14 248 153 5107 60 3 0 chr5 92076896 92077543 -107552607 + L1PA7 LINE L1 5495 6143 -11 278 263 51 25 chr5 92077672 92077790 -107552360 - L1ME4a LINE L1 -13 6108 5988 1061 195 91 0 chr5 92077897 92078068 -107552082 - AluJb SINE Alu 0 313 114 231 36 0 0 chr5 92078068 92078096 -107552054 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1061 195 91 0 chr5 92078096 92078174 -107551976 - AluJb SINE Alu -199 114 44 206 220 0 160 chr5 92078387 92078441 -107551709 + MIR SINE MIR 49 81 -181 552 90 0 0 chr5 92078441 92078519 -107551631 - MADE1 DNA Mariner -2 78 1 206 220 0 160 chr5 92078519 92078564 -107551586 + MIR SINE MIR 81 132 -130 230 330 0 11 chr5 92079774 92079862 -107550288 + (TA)n Simple_repeat Simple_repeat 1 87 0 2538 192 4 17 chr5 92080344 92080866 -107549284 - L1 LINE L1 -885 5261 4747 1987 47 8 0 chr5 92080932 92081185 -107548965 + L1PA4 LINE L1 5895 6149 -6 7203 178 35 3 chr5 92081452 92082952 -107547198 - L1 LINE L1 -1393 4753 3205 1286 195 43 4 chr5 92082952 92083229 -107546921 + L1M2 LINE L1 5512 5799 -513 1729 157 163 0 chr5 92083230 92083590 -107546560 - MSTA LTR MaLR 0 428 6 202 231 15 31 chr5 92083901 92083966 -107546184 + CT-rich Low_complexity Low_complexity 1 64 0 261 290 7 41 chr5 92084039 92084245 -107545905 + CT-rich Low_complexity Low_complexity 1 199 0 200 253 11 23 chr5 92084569 92084656 -107545494 + T-rich Low_complexity Low_complexity 2 87 0 221 83 28 0 chr5 92085775 92085811 -107544339 + (CA)n Simple_repeat Simple_repeat 2 38 0 583 56 11 11 chr5 92086837 92086926 -107543224 + (TCC)n Simple_repeat Simple_repeat 2 90 0 24 0 0 0 chr5 92087508 92087532 -107542618 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 92089694 92089715 -107540435 + AT_rich Low_complexity Low_complexity 1 21 0 748 139 64 17 chr5 92090127 92090299 -107539851 - ORSL DNA AcHobo -27 248 69 2106 117 0 16 chr5 92091010 92091327 -107538823 + AluSx SINE Alu 1 312 0 235 105 26 0 chr5 92091933 92091971 -107538179 + MLT1G LTR MaLR 551 589 -1 425 182 0 0 chr5 92092093 92092170 -107537980 - MLT1D LTR MaLR -175 330 254 1544 84 19 0 chr5 92092306 92092519 -107537631 - L1PA7 LINE L1 -8 6146 5930 759 217 49 27 chr5 92092520 92092704 -107537446 - MLT1D LTR MaLR -317 188 1 4269 185 33 19 chr5 92093267 92094114 -107536036 + MER6 DNA MER2_type 1 859 -6 26 0 0 0 chr5 92094345 92094371 -107535779 + AT_rich Low_complexity Low_complexity 1 26 0 7458 27 7 1 chr5 92097243 92098888 -107531262 + L1PA4 LINE L1 4506 6155 0 22 0 0 0 chr5 92098965 92098987 -107531163 + AT_rich Low_complexity Low_complexity 1 22 0 213 314 63 57 chr5 92099739 92099914 -107530236 - MER5B DNA MER1_type -1 177 2 731 273 21 0 chr5 92101124 92101318 -107528832 + MER63A DNA MER1_type 13 210 0 1279 260 166 20 chr5 92101417 92101903 -107528247 + MLT1E LTR MaLR 13 653 -1 308 252 219 0 chr5 92101903 92102026 -107528124 - MIR SINE MIR -12 250 101 24 0 0 0 chr5 92102730 92102754 -107527396 + AT_rich Low_complexity Low_complexity 1 24 0 358 278 21 7 chr5 92102978 92103122 -107527028 + L1M4 LINE L1 2786 2931 -3215 369 0 0 0 chr5 92103161 92103202 -107526948 + (TG)n Simple_repeat Simple_repeat 2 42 0 766 332 40 32 chr5 92103376 92103752 -107526398 + L2 LINE L2 2376 2754 -560 342 294 159 62 chr5 92103751 92104091 -107526059 + L2 LINE L2 2940 3312 -1 * 242 254 113 21 chr5 92104130 92104272 -107525878 - L1M4 LINE L1 -2642 3504 3350 711 272 65 31 chr5 92104379 92104827 -107525323 - L1M4 LINE L1 -3005 3141 2679 262 283 60 33 chr5 92105252 92105436 -107524714 - L1M4 LINE L1 -1280 4866 4678 1296 334 36 49 chr5 92105438 92106344 -107523806 + L1MCc LINE L1 17 911 -5512 30 59 0 0 chr5 92106620 92106671 -107523479 + AT_rich Low_complexity Low_complexity 1 51 0 23 33 0 0 chr5 92107726 92107756 -107522394 + AT_rich Low_complexity Low_complexity 1 30 0 293 271 28 28 chr5 92108163 92108270 -107521880 - MLT1H LTR MaLR 0 549 443 1575 103 0 5 chr5 92108393 92108606 -107521544 - AluSx SINE Alu -11 301 90 2933 128 14 26 chr5 92108625 92109119 -107521031 - LTR22B LTR ERVK -3 489 2 435 234 0 0 chr5 92109120 92109214 -107520936 - AluSx SINE Alu -217 95 2 2363 126 11 16 chr5 92110865 92111239 -107518911 + THE1C LTR MaLR 4 375 0 9897 120 15 60 chr5 92111240 92112894 -107517256 + THE1C-int LTR MaLR 2 1580 0 2157 125 50 17 chr5 92112896 92113257 -107516893 + THE1C LTR MaLR 3 375 0 1576 208 22 48 chr5 92113528 92113564 -107516586 + MLT1A1 LTR MaLR 13 48 -317 1848 157 3 10 chr5 92113564 92113870 -107516280 - AluSc SINE Alu -5 304 1 1576 208 22 48 chr5 92113870 92114189 -107515961 + MLT1A1 LTR MaLR 48 359 -6 324 197 0 0 chr5 92114894 92114965 -107515185 - L1MA10 LINE L1 -15 6319 6249 1923 100 27 0 chr5 92114967 92115228 -107514922 - THE1C LTR MaLR -107 268 1 226 304 80 54 chr5 92116204 92116316 -107513834 + L2 LINE L2 3158 3272 0 2631 102 3 0 chr5 92117117 92117471 -107512679 - THE1A LTR MaLR 0 355 1 4913 168 107 12 chr5 92117927 92118858 -107511292 - LTR28 LTR ERV1 0 1020 1 220 269 0 26 chr5 92119003 92119081 -107511069 + GA-rich Low_complexity Low_complexity 2 77 0 235 167 21 0 chr5 92119194 92119242 -107510908 + L1PA15-16 LINE L1 2866 2914 -3935 4692 236 56 17 chr5 92119925 92121476 -107508674 + L1PA13 LINE L1 989 2607 -4190 2679 122 46 0 chr5 92121476 92121853 -107508297 + MLT2A1 LTR ERVL 1 400 -44 318 50 0 0 chr5 92121853 92121893 -107508257 + (CA)n Simple_repeat Simple_repeat 1 40 0 2679 122 46 0 chr5 92121893 92121932 -107508218 + MLT2A1 LTR ERVL 400 436 -8 3959 260 39 9 chr5 92121935 92123198 -107506952 + L1PA13 LINE L1 2602 3901 -2896 562 330 76 53 chr5 92123311 92123875 -107506275 + L1ME LINE L1 25 601 -5469 611 75 0 0 chr5 92124497 92124577 -107505573 + MADE1 DNA Mariner 1 80 0 26 0 0 0 chr5 92124655 92124681 -107505469 + AT_rich Low_complexity Low_complexity 1 26 0 342 266 133 70 chr5 92125140 92125426 -107504724 - L2 LINE L2 0 3313 3010 310 51 0 0 chr5 92125516 92125555 -107504595 - L1PA2 LINE L1 -277 5878 5840 2428 24 0 7 chr5 92125555 92125831 -107504319 + L1PA2 LINE L1 5864 6152 -3 279 197 42 0 chr5 92126236 92126307 -107503843 + (CA)n Simple_repeat Simple_repeat 2 75 0 22 0 0 0 chr5 92126935 92126957 -107503193 + AT_rich Low_complexity Low_complexity 1 22 0 951 287 191 25 chr5 92127097 92127578 -107502572 + L2 LINE L2 2119 2679 -635 639 318 88 43 chr5 92128887 92129309 -107500841 + L2 LINE L2 2868 3308 -5 42 36 0 0 chr5 92129437 92129493 -107500657 + AT_rich Low_complexity Low_complexity 1 56 0 1513 254 18 15 chr5 92129712 92130169 -107499981 + L1M4 LINE L1 3812 4269 -1877 24 53 0 0 chr5 92132928 92132966 -107497184 + AT_rich Low_complexity Low_complexity 1 38 0 1787 139 21 4 chr5 92132966 92133247 -107496903 - AluSx SINE Alu -26 286 1 1363 271 58 16 chr5 92133572 92134056 -107496094 + LTR33 LTR ERVL 9 512 -9 364 233 0 11 chr5 92134086 92134176 -107495974 + MER20B DNA MER1_type 1 89 -694 766 271 35 69 chr5 92134181 92134631 -107495519 + L2 LINE L2 2572 3125 -188 227 299 164 8 chr5 92134810 92134944 -107495206 - MIR SINE MIR -37 225 71 1473 154 22 8 chr5 92135721 92135988 -107494162 - L1PB4 LINE L1 -4 6152 5882 302 349 37 0 chr5 92136088 92136197 -107493953 + MIR SINE MIR 40 152 -56 826 176 107 0 chr5 92136491 92136650 -107493500 - MER45A DNA AcHobo 0 178 3 21 71 0 0 chr5 92136806 92136848 -107493302 + AT_rich Low_complexity Low_complexity 1 42 0 2016 148 0 0 chr5 92137189 92137500 -107492650 + AluSx SINE Alu 1 311 -1 2361 98 3 0 chr5 92138760 92139067 -107491083 + AluSp SINE Alu 6 313 0 21 0 0 0 chr5 92139123 92139144 -107491006 + AT_rich Low_complexity Low_complexity 1 21 0 1673 129 50 14 chr5 92141828 92142108 -107488042 - AluSx SINE Alu -22 290 1 23 0 0 0 chr5 92142111 92142134 -107488016 + AT_rich Low_complexity Low_complexity 1 23 0 1681 199 10 7 chr5 92143185 92143491 -107486659 - AluJo SINE Alu -5 307 1 2218 105 3 3 chr5 92144069 92144373 -107485777 + AluSg SINE Alu 3 306 -4 289 271 0 0 chr5 92146693 92146752 -107483398 - L2 LINE L2 -4 3309 3251 303 299 75 116 chr5 92147507 92147852 -107482298 + L2 LINE L2 2941 3271 -1 336 340 57 0 chr5 92148049 92148190 -107481960 + L2 LINE L2 3122 3270 -2 1882 170 0 3 chr5 92149202 92149484 -107480666 - AluSx SINE Alu -31 281 1 202 312 88 24 chr5 92150107 92150232 -107479918 + L2 LINE L2 2353 2485 -829 2399 132 20 3 chr5 92150422 92150779 -107479371 - THE1B LTR MaLR 0 364 2 432 233 50 33 chr5 92152642 92152762 -107477388 + L2 LINE L2 3192 3313 0 2066 40 36 0 chr5 92153875 92154125 -107476025 - AluY SINE Alu -17 294 36 183 320 93 0 chr5 92154477 92154574 -107475576 + L2 LINE L2 3126 3231 -41 22 0 0 0 chr5 92155124 92155146 -107475004 + AT_rich Low_complexity Low_complexity 1 22 0 405 331 75 8 chr5 92155388 92155654 -107474496 - L1M4 LINE L1 -1968 4178 3895 1504 121 62 29 chr5 92155753 92156059 -107474091 - L1MA7 LINE L1 -2 6289 5974 188 178 0 22 chr5 92156164 92156209 -107473941 + GA-rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr5 92156784 92156813 -107473337 + AT_rich Low_complexity Low_complexity 1 29 0 399 285 93 32 chr5 92156829 92157075 -107473075 - MIR SINE MIR 0 262 2 2514 70 0 13 chr5 92157431 92157744 -107472406 - AluY SINE Alu -2 309 1 246 81 0 0 chr5 92159128 92159165 -107470985 + (TG)n Simple_repeat Simple_repeat 2 38 0 2171 128 0 28 chr5 92159392 92159713 -107470437 + AluSx SINE Alu 1 312 0 208 227 0 0 chr5 92160378 92160422 -107469728 + CT-rich Low_complexity Low_complexity 1 44 0 346 278 102 52 chr5 92160892 92161099 -107469051 - MIR SINE MIR -44 218 3 2194 103 0 4 chr5 92161226 92161507 -107468643 + AluSx SINE Alu 1 280 -32 216 0 0 0 chr5 92161508 92161532 -107468618 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 402 161 25 25 chr5 92161545 92161626 -107468524 + FLAM_A SINE Alu 46 126 -16 1806 166 19 7 chr5 92161723 92162030 -107468120 + AluJo SINE Alu 1 311 -1 718 236 127 52 chr5 92162743 92162883 -107467267 - MIR SINE MIR -15 247 82 2467 76 10 13 chr5 92162883 92163197 -107466953 + AluSp SINE Alu 1 313 0 718 236 127 52 chr5 92163197 92163285 -107466865 - MIR SINE MIR -180 82 2 186 364 54 31 chr5 92163345 92163474 -107466676 + L2 LINE L2 3177 3308 -5 366 23 0 0 chr5 92164813 92164856 -107465294 + (CA)n Simple_repeat Simple_repeat 1 43 0 200 159 0 23 chr5 92166211 92166255 -107463895 + (TA)n Simple_repeat Simple_repeat 2 44 0 196 354 0 13 chr5 92166494 92166573 -107463577 + L2 LINE L2 3235 3312 -1 * 206 252 48 117 chr5 92166568 92166671 -107463479 + L2 LINE L2 3209 3304 -9 197 277 76 53 chr5 92166935 92167067 -107463083 - MIR SINE MIR -75 133 53 2039 97 0 57 chr5 92167703 92168046 -107462104 - AluSx SINE Alu 0 326 1 558 152 183 18 chr5 92168100 92168264 -107461886 + MER3 DNA MER1_type 6 196 -13 22 103 0 0 chr5 92168606 92168684 -107461466 + AT_rich Low_complexity Low_complexity 1 78 0 1843 174 3 7 chr5 92168708 92169001 -107461149 - AluJb SINE Alu -17 295 4 244 331 32 0 chr5 92169499 92169623 -107460527 - MER117 DNA MER1_type -29 168 41 322 153 111 28 chr5 92169890 92169962 -107460188 + MER5A DNA MER1_type 29 106 -83 24 0 0 0 chr5 92170153 92170177 -107459973 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr5 92170259 92170290 -107459860 + AT_rich Low_complexity Low_complexity 1 31 0 294 290 0 0 chr5 92170312 92170381 -107459769 - L2 LINE L2 -17 3296 3228 21 57 0 0 chr5 92171333 92171368 -107458782 + AT_rich Low_complexity Low_complexity 1 35 0 964 201 0 24 chr5 92172112 92172321 -107457829 + MER3 DNA MER1_type 1 204 -5 435 366 58 58 chr5 92172482 92172949 -107457201 - L2 LINE L2 -1 3271 2805 285 272 155 0 chr5 92172970 92173073 -107457077 + L2 LINE L2 3152 3270 -2 28613 96 14 13 chr5 92173193 92178904 -107451246 - L1PA7 LINE L1 -11 6458 724 231 136 15 30 chr5 92179320 92179386 -107450764 + CT-rich Low_complexity Low_complexity 2 66 0 396 0 0 0 chr5 92179386 92179430 -107450720 + (CA)n Simple_repeat Simple_repeat 1 44 0 2050 113 21 0 chr5 92181009 92181300 -107448850 - AluY SINE Alu -14 297 1 215 338 90 23 chr5 92181744 92181877 -107448273 - MIR3 SINE MIR -49 159 18 1738 181 0 16 chr5 92181954 92182263 -107447887 - AluJb SINE Alu -8 304 1 430 15 0 62 chr5 92183260 92183349 -107446801 + L1PA2 LINE L1 6091 6155 0 211 257 95 86 chr5 92183748 92183853 -107446297 + L3 LINE CR1 1385 1490 -87 249 33 0 0 chr5 92185335 92185365 -107444785 + (T)n Simple_repeat Simple_repeat 1 30 0 386 338 27 7 chr5 92186316 92186464 -107443686 + L2 LINE L2 3158 3308 -5 470 324 77 49 chr5 92186640 92186734 -107443416 + MIR SINE MIR 3 93 -169 1468 191 6 32 chr5 92186734 92187048 -107443102 - AluJo SINE Alu -6 306 1 470 324 77 49 chr5 92187048 92187200 -107442950 + MIR SINE MIR 93 256 -6 213 279 59 15 chr5 92188917 92188985 -107441165 - L2 LINE L2 -16 3297 3227 1390 317 214 14 chr5 92190093 92191036 -107439114 + L3 LINE CR1 445 1576 -1 532 224 26 51 chr5 92191389 92191545 -107438605 + MIR SINE MIR 55 206 -56 190 358 67 15 chr5 92192195 92192329 -107437821 - MIR3 SINE MIR -52 156 16 23 0 0 0 chr5 92193258 92193281 -107436869 + AT_rich Low_complexity Low_complexity 1 23 0 243 0 0 0 chr5 92195974 92196001 -107434149 + (T)n Simple_repeat Simple_repeat 1 27 0 21 71 0 0 chr5 92196251 92196293 -107433857 + AT_rich Low_complexity Low_complexity 1 42 0 1499 142 35 0 chr5 92197487 92197747 -107432403 + L1MA5A LINE L1 6026 6294 -3 199 240 104 31 chr5 92197782 92197878 -107432272 - MER5C DNA MER1_type -11 313 211 814 258 51 39 chr5 92198444 92198700 -107431450 - MIR SINE MIR -2 260 2 218 336 164 14 chr5 92198884 92199118 -107431032 + L2 LINE L2 2783 3049 -223 904 240 32 5 chr5 92199221 92199438 -107430712 + MER58A DNA MER1_type 1 223 -1 31 26 0 0 chr5 92199562 92199600 -107430550 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr5 92199763 92199786 -107430364 + AT_rich Low_complexity Low_complexity 1 23 0 1214 191 84 43 chr5 92200764 92201063 -107429087 - AluJb SINE Alu -1 311 1 2437 128 33 51 chr5 92201083 92201574 -107428576 + L1MA3 LINE L1 5824 6305 0 21 0 0 0 chr5 92203195 92203216 -107426934 + AT_rich Low_complexity Low_complexity 1 21 0 186 164 15 45 chr5 92206726 92206793 -107423357 + CT-rich Low_complexity Low_complexity 2 66 0 361 324 97 60 chr5 92208670 92209040 -107421110 + L2 LINE L2 2883 3266 -6 278 360 33 47 chr5 92209238 92209449 -107420701 + MIR SINE MIR 26 233 -29 496 300 72 52 chr5 92213942 92214249 -107415901 - L2 LINE L2 -40 3273 2961 308 341 18 55 chr5 92214215 92214379 -107415771 + MIR SINE MIR 34 191 -71 * 24 0 0 0 chr5 92214465 92214489 -107415661 + AT_rich Low_complexity Low_complexity 1 24 0 2280 106 0 3 chr5 92215042 92215345 -107414805 + AluSq SINE Alu 1 302 -11 198 0 0 0 chr5 92216516 92216538 -107413612 + (A)n Simple_repeat Simple_repeat 1 22 0 322 275 173 30 chr5 92216959 92217137 -107413013 + MIR3 SINE MIR 2 205 -3 216 0 0 0 chr5 92217143 92217167 -107412983 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 769 170 31 0 chr5 92217399 92217546 -107412604 - MIR SINE MIR -45 217 64 244 303 13 0 chr5 92218213 92218289 -107411861 + CT-rich Low_complexity Low_complexity 2 78 0 312 94 0 0 chr5 92218834 92218887 -107411263 + (TC)n Simple_repeat Simple_repeat 2 54 0 697 304 81 26 chr5 92219543 92219888 -107410262 - L3b LINE CR1 -2 1581 1218 1792 185 10 0 chr5 92220746 92221054 -107409096 + AluJo SINE Alu 1 311 -1 431 250 54 9 chr5 92221251 92221363 -107408787 - L2 LINE L2 0 3313 3197 2249 80 0 20 chr5 92223327 92223627 -107406523 - AluSc SINE Alu -11 298 5 394 331 0 42 chr5 92223742 92223884 -107406266 - MIR SINE MIR -109 153 18 1068 105 92 0 chr5 92225274 92225426 -107404724 - AluSc SINE Alu -19 290 125 2074 114 3 3 chr5 92225592 92225889 -107404261 - AluSx SINE Alu -15 297 1 193 239 70 99 chr5 92227991 92228062 -107402088 - MIR SINE MIR -38 224 156 2397 76 0 0 chr5 92228391 92228692 -107401458 + AluSg SINE Alu 1 301 -9 29 78 0 0 chr5 92228708 92228772 -107401378 + AT_rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr5 92228914 92228935 -107401215 + AT_rich Low_complexity Low_complexity 1 21 0 1973 64 4 4 chr5 92229455 92229722 -107400428 - L1PA4 LINE L1 0 6155 5889 564 289 149 0 chr5 92229775 92229976 -107400174 - MIR SINE MIR -25 237 7 393 149 0 0 chr5 92230198 92230265 -107399885 + (CA)n Simple_repeat Simple_repeat 2 68 0 2414 127 38 71 chr5 92230295 92230558 -107399592 + Tigger2a DNA MER2_type 1 244 -2464 1664 96 0 0 chr5 92230558 92230778 -107399372 + AluSc SINE Alu 86 305 -4 2414 127 38 71 chr5 92230778 92230963 -107399187 + Tigger2a DNA MER2_type 244 434 0 26 0 0 0 chr5 92231255 92231281 -107398869 + AT_rich Low_complexity Low_complexity 1 26 0 26 0 0 0 chr5 92232035 92232061 -107398089 + AT_rich Low_complexity Low_complexity 1 26 0 1382 137 20 131 chr5 92232112 92232455 -107397695 + AluYb8 SINE Alu 2 306 -2 1431 226 7 0 chr5 92232464 92232743 -107397407 + AluJo SINE Alu 1 281 -31 199 330 85 42 chr5 92234142 92234260 -107395890 - L2 LINE L2 -4 3268 3146 21 71 0 0 chr5 92234780 92234822 -107395328 + AT_rich Low_complexity Low_complexity 1 42 0 2191 118 56 8 chr5 92235042 92235398 -107394752 + THE1C LTR MaLR 1 373 -2 10103 110 13 49 chr5 92235400 92237040 -107393110 + THE1C-int LTR MaLR 1 1580 0 1990 143 62 8 chr5 92237040 92237396 -107392754 + THE1C LTR MaLR 1 375 0 617 296 6 12 chr5 92240739 92240911 -107389239 + MER5B DNA MER1_type 1 171 -7 180 77 0 0 chr5 92241825 92241851 -107388299 + (CA)n Simple_repeat Simple_repeat 1 26 0 1561 146 24 95 chr5 92243034 92243337 -107386813 - L1MA7 LINE L1 -171 6120 5797 2054 124 0 25 chr5 92243337 92243652 -107386498 - AluSx SINE Alu -5 307 1 1561 146 24 95 chr5 92243652 92243710 -107386440 - L1MA7 LINE L1 -494 5797 5784 830 150 7 0 chr5 92243710 92243863 -107386287 + L1MA6 LINE L1 6147 6300 0 1561 146 24 95 chr5 92243863 92243878 -107386272 - L1MA7 LINE L1 -507 5784 5770 348 325 60 0 chr5 92243887 92244004 -107386146 + MER5B DNA MER1_type 2 125 -53 297 205 26 0 chr5 92244011 92244128 -107386022 + (TA)n Simple_repeat Simple_repeat 1 120 0 1146 212 17 55 chr5 92244128 92244289 -107385861 - AluJo SINE Alu -16 286 139 1998 102 31 14 chr5 92244289 92244583 -107385567 - AluSx SINE Alu -13 299 1 1146 212 17 55 chr5 92244583 92244714 -107385436 - AluJo SINE Alu -163 139 5 2462 61 0 3 chr5 92245407 92245717 -107384433 - AluY SINE Alu -2 309 1 778 220 68 55 chr5 92246873 92247109 -107383041 + MIR SINE MIR 20 258 -4 525 32 0 0 chr5 92248774 92248837 -107381313 + (TA)n Simple_repeat Simple_repeat 1 63 0 21 0 0 0 chr5 92249736 92249757 -107380393 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr5 92250859 92250883 -107379267 + (TTA)n Simple_repeat Simple_repeat 1 24 0 267 174 0 0 chr5 92251503 92251549 -107378601 - L2 LINE L2 0 3313 3268 25 0 0 0 chr5 92251882 92251907 -107378243 + AT_rich Low_complexity Low_complexity 1 25 0 428 289 91 12 chr5 92252139 92252381 -107377769 - MIR SINE MIR -1 261 1 198 71 0 0 chr5 92252562 92252590 -107377560 + (CA)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr5 92253222 92253243 -107376907 + (T)n Simple_repeat Simple_repeat 1 21 0 22 70 0 0 chr5 92254337 92254380 -107375770 + AT_rich Low_complexity Low_complexity 1 43 0 192 77 0 0 chr5 92255568 92255594 -107374556 + (T)n Simple_repeat Simple_repeat 1 26 0 30 0 0 0 chr5 92258874 92258904 -107371246 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 92261638 92261659 -107368491 + AT_rich Low_complexity Low_complexity 1 21 0 224 260 14 0 chr5 92262718 92262791 -107367359 + (CG)n Simple_repeat Simple_repeat 2 75 0 425 65 0 16 chr5 92262802 92262864 -107367286 + (GGA)n Simple_repeat Simple_repeat 1 61 0 191 276 26 40 chr5 92265211 92265287 -107364863 - L2 LINE L2 -2577 737 663 28 61 0 0 chr5 92265418 92265467 -107364683 + AT_rich Low_complexity Low_complexity 1 49 0 186 103 0 0 chr5 92265805 92265834 -107364316 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 302 280 102 8 chr5 92265899 92266017 -107364133 + MIR SINE MIR 17 145 -63 901 164 6 18 chr5 92269969 92270134 -107360016 - MER3 DNA MER1_type -46 163 1 186 43 0 0 chr5 92270161 92270184 -107359966 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 312 303 0 30 chr5 92270287 92270386 -107359764 - MIR3 SINE MIR -26 182 87 2377 60 0 41 chr5 92270896 92271212 -107358938 - AluY SINE Alu -8 303 1 197 100 50 0 chr5 92271312 92271352 -107358798 + T-rich Low_complexity Low_complexity 2 43 0 37 23 0 0 chr5 92271493 92271537 -107358613 + AT_rich Low_complexity Low_complexity 1 44 0 463 256 31 38 chr5 92271766 92271926 -107358224 + MIR SINE MIR 63 221 -41 618 108 29 0 chr5 92272804 92272906 -107357244 - AluSx SINE Alu 0 310 206 839 136 0 0 chr5 92272907 92273025 -107357125 - AluSx SINE Alu -195 118 1 31 0 0 0 chr5 92273075 92273106 -107357044 + AT_rich Low_complexity Low_complexity 1 31 0 614 316 28 8 chr5 92273573 92273826 -107356324 - MIR SINE MIR -3 259 2 568 298 123 4 chr5 92273893 92274121 -107356029 - MARNA DNA Mariner -51 535 281 317 275 38 46 chr5 92274461 92274592 -107355558 + MIR SINE MIR 132 261 -1 240 154 0 0 chr5 92276324 92276376 -107353774 + CT-rich Low_complexity Low_complexity 2 53 0 222 37 0 0 chr5 92276447 92276474 -107353676 + (CA)n Simple_repeat Simple_repeat 2 28 0 347 250 134 0 chr5 92277397 92277509 -107352641 + MER5A DNA MER1_type 35 161 -28 22 0 0 0 chr5 92278542 92278564 -107351586 + AT_rich Low_complexity Low_complexity 1 22 0 277 382 0 10 chr5 92278984 92279086 -107351064 - MIR SINE MIR -87 121 21 21 0 0 0 chr5 92280933 92280954 -107349196 + AT_rich Low_complexity Low_complexity 1 21 0 221 193 68 68 chr5 92281981 92282069 -107348081 + MIR SINE MIR 119 206 -56 190 358 67 15 chr5 92282703 92282837 -107347313 - MIR3 SINE MIR -52 156 16 23 0 0 0 chr5 92283767 92283790 -107346360 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr5 92286483 92286506 -107343644 + (T)n Simple_repeat Simple_repeat 1 23 0 21 71 0 0 chr5 92286756 92286798 -107343352 + AT_rich Low_complexity Low_complexity 1 42 0 1464 147 39 0 chr5 92287992 92288251 -107341899 + L1MA5A LINE L1 6026 6294 -3 814 258 51 39 chr5 92288947 92289203 -107340947 - MIR SINE MIR -2 260 2 218 336 164 14 chr5 92289387 92289621 -107340529 + L2 LINE L2 2783 3049 -223 904 240 32 5 chr5 92289724 92289941 -107340209 + MER58A DNA MER1_type 1 223 -1 31 26 0 0 chr5 92290065 92290103 -107340047 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr5 92290266 92290289 -107339861 + AT_rich Low_complexity Low_complexity 1 23 0 1214 191 84 43 chr5 92291267 92291566 -107338584 - AluJb SINE Alu -1 311 1 2423 130 33 51 chr5 92291586 92292077 -107338073 + L1MA3 LINE L1 5824 6305 0 21 0 0 0 chr5 92293703 92293724 -107336426 + AT_rich Low_complexity Low_complexity 1 21 0 186 164 15 45 chr5 92297291 92297358 -107332792 + CT-rich Low_complexity Low_complexity 2 66 0 361 324 97 60 chr5 92299234 92299604 -107330546 + L2 LINE L2 2883 3266 -6 278 360 33 47 chr5 92299802 92300013 -107330137 + MIR SINE MIR 26 233 -29 402 296 82 53 chr5 92304504 92304808 -107325342 - L2 LINE L2 -40 3273 2961 303 356 18 49 chr5 92304775 92304938 -107325212 + MIR SINE MIR 34 191 -71 * 24 0 0 0 chr5 92305024 92305048 -107325102 + AT_rich Low_complexity Low_complexity 1 24 0 2280 106 0 3 chr5 92305601 92305904 -107324246 + AluSq SINE Alu 1 302 -11 198 0 0 0 chr5 92307075 92307097 -107323053 + (A)n Simple_repeat Simple_repeat 1 22 0 307 280 175 30 chr5 92307518 92307695 -107322455 + MIR3 SINE MIR 2 205 -3 216 0 0 0 chr5 92307701 92307725 -107322425 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 20812 74 7 6 chr5 92308087 92310955 -107319195 - L1P LINE L1 -2399 3747 878 433 111 37 37 chr5 92310949 92311030 -107319120 + L1P LINE L1 5050 5130 -1016 * 29 0 0 0 chr5 92311651 92311680 -107318470 + AT_rich Low_complexity Low_complexity 1 29 0 39 80 0 0 chr5 92311793 92311881 -107318269 + AT_rich Low_complexity Low_complexity 1 88 0 285 183 0 0 chr5 92315469 92315529 -107314621 + (TA)n Simple_repeat Simple_repeat 2 61 0 1152 177 0 5 chr5 92315572 92315770 -107314380 + MER3 DNA MER1_type 1 197 -12 2146 117 7 0 chr5 92316291 92316620 -107313530 + AluSq SINE Alu 1 313 0 23 68 0 0 chr5 92316866 92316910 -107313240 + AT_rich Low_complexity Low_complexity 1 44 0 1719 219 49 37 chr5 92317729 92318324 -107311826 - L1MC5 LINE L1 -45 7916 7315 1538 228 74 68 chr5 92318361 92318973 -107311177 - L1MC5 LINE L1 -722 7239 6610 252 100 0 0 chr5 92318973 92319013 -107311137 + (TG)n Simple_repeat Simple_repeat 2 41 0 1538 228 74 68 chr5 92319013 92319062 -107311088 - L1MC5 LINE L1 -1351 6610 6563 1457 259 124 26 chr5 92319430 92320002 -107310148 - L1MEc LINE L1 -5734 662 35 27 0 0 0 chr5 92320069 92320096 -107310054 + AT_rich Low_complexity Low_complexity 1 27 0 349 250 87 11 chr5 92320274 92320366 -107309784 - L2 LINE L2 0 3272 3174 2538 202 50 45 chr5 92320384 92321058 -107309092 + L1MD2 LINE L1 5669 6346 -13 1611 69 5 23 chr5 92323077 92323295 -107306855 - AluSg/x SINE Alu -12 300 87 1172 187 41 29 chr5 92324567 92324772 -107305378 - MER33 DNA MER1_type -2263 322 110 2176 91 0 32 chr5 92324772 92325080 -107305070 + AluY SINE Alu 1 298 -13 1172 187 41 29 chr5 92325080 92325189 -107304961 - MER33 DNA MER1_type -2475 110 4 342 270 159 16 chr5 92326226 92326352 -107303798 - L2 LINE L2 0 3272 3129 3618 65 0 0 chr5 92328786 92329246 -107300904 - L1PA8 LINE L1 -3 6169 5710 214 312 13 13 chr5 92329418 92329495 -107300655 - L2 LINE L2 -1 3271 3195 366 304 7 14 chr5 92329514 92329652 -107300498 - MLT1L LTR MaLR -2 613 477 220 338 126 13 chr5 92329919 92330070 -107300080 - L2 LINE L2 -212 3060 2893 381 200 0 14 chr5 92330186 92330256 -107299894 - FRAM SINE Alu -51 115 47 301 322 127 0 chr5 92330278 92330396 -107299754 + L2 LINE L2 3133 3265 -7 241 290 81 0 chr5 92330642 92330704 -107299446 - L3 LINE CR1 -13 1564 1498 28 29 0 0 chr5 92330818 92330853 -107299297 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 92331598 92331621 -107298529 + AT_rich Low_complexity Low_complexity 1 23 0 297 355 6 41 chr5 92332153 92332322 -107297828 - MIR3 SINE MIR -13 195 33 23 0 0 0 chr5 92332511 92332534 -107297616 + AT_rich Low_complexity Low_complexity 1 23 0 28 86 0 0 chr5 92333667 92333737 -107296413 + AT_rich Low_complexity Low_complexity 1 70 0 220 279 13 13 chr5 92333901 92333980 -107296170 + GA-rich Low_complexity Low_complexity 2 80 0 1904 130 7 7 chr5 92334286 92334579 -107295571 - Tigger3b DNA MER2_type -1 1230 938 5706 96 38 6 chr5 92334721 92335592 -107294558 - Tigger3b DNA MER2_type -297 934 36 289 295 61 12 chr5 92336100 92336218 -107293932 - MIR SINE MIR -67 141 40 1415 142 80 40 chr5 92336219 92336449 -107293701 + MER33 DNA MER1_type 1 247 -2338 2176 114 0 3 chr5 92336449 92336747 -107293403 - AluSq SINE Alu -16 297 1 1415 142 80 40 chr5 92336747 92336818 -107293332 + MER33 DNA MER1_type 247 314 -10 22 35 0 0 chr5 92340060 92340089 -107290061 + AT_rich Low_complexity Low_complexity 1 29 0 507 125 0 0 chr5 92340373 92340453 -107289697 + MADE1 DNA Mariner 1 80 0 422 363 38 52 chr5 92341222 92341489 -107288661 + L2 LINE L2 3004 3266 -6 216 196 0 0 chr5 92345213 92345259 -107284891 + T-rich Low_complexity Low_complexity 1 46 0 289 74 0 93 chr5 92346956 92347010 -107283140 + L2 LINE L2 3264 3312 -1 41 58 0 0 chr5 92347961 92348030 -107282120 + AT_rich Low_complexity Low_complexity 1 69 0 32 26 0 0 chr5 92348652 92348691 -107281459 + AT_rich Low_complexity Low_complexity 1 39 0 2218 93 0 0 chr5 92348710 92349011 -107281139 - AluSg1 SINE Alu 0 301 1 1189 175 13 4 chr5 92349012 92349246 -107280904 - L1MA8 LINE L1 -45 6246 6011 354 61 0 0 chr5 92351090 92351139 -107279011 + (CA)n Simple_repeat Simple_repeat 1 49 0 190 404 50 0 chr5 92353380 92353479 -107276671 + L2 LINE L2 3210 3313 0 254 267 0 0 chr5 92354342 92354402 -107275748 - MLT1L LTR MaLR 0 615 556 265 230 20 0 chr5 92354629 92354729 -107275421 + (TA)n Simple_repeat Simple_repeat 2 103 0 1619 181 7 3 chr5 92354730 92355018 -107275132 - AluSx SINE Alu -23 289 1 246 221 29 44 chr5 92355182 92355250 -107274900 + Alu SINE Alu 215 281 -20 255 376 0 0 chr5 92355371 92355456 -107274694 + MIR SINE MIR 48 132 -130 236 256 103 0 chr5 92356477 92356555 -107273595 - MIR SINE MIR -55 207 122 25 51 0 0 chr5 92359018 92359057 -107271093 + AT_rich Low_complexity Low_complexity 1 39 0 543 56 0 0 chr5 92362490 92362561 -107267589 + (TC)n Simple_repeat Simple_repeat 1 71 0 214 288 27 0 chr5 92364923 92364996 -107265154 - L2 LINE L2 -303 2969 2895 226 132 38 0 chr5 92366061 92366114 -107264036 + (TA)n Simple_repeat Simple_repeat 1 55 0 250 203 94 0 chr5 92366234 92366298 -107263852 - MIR SINE MIR -96 166 97 22 56 0 0 chr5 92366300 92366336 -107263814 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 92367380 92367401 -107262749 + AT_rich Low_complexity Low_complexity 1 21 0 446 224 142 44 chr5 92369090 92369295 -107260855 - MLT1J LTR MaLR -247 264 40 1477 244 0 13 chr5 92369385 92369745 -107260405 + AluJo SINE Alu 1 356 0 186 356 129 0 chr5 92369900 92370001 -107260149 + MIR3 SINE MIR 11 124 -84 2010 111 14 4 chr5 92370136 92370439 -107259711 + AluSx SINE Alu 1 306 0 22 0 0 0 chr5 92371060 92371082 -107259068 + AT_rich Low_complexity Low_complexity 1 22 0 2513 59 0 26 chr5 92371751 92372092 -107258058 + L1PA6 LINE L1 5823 6154 0 211 308 0 15 chr5 92372131 92372196 -107257954 + L2 LINE L2 2242 2305 -1009 369 340 150 36 chr5 92372932 92373528 -107256622 + L2 LINE L2 2601 3272 0 1525 140 159 0 chr5 92373918 92374175 -107255975 + AluSx SINE Alu 1 298 -4 191 308 93 73 chr5 92374923 92375170 -107254980 - L2 LINE L2 -213 3059 2808 540 89 13 0 chr5 92376211 92376290 -107253860 + MADE1 DNA Mariner 1 80 0 336 370 75 57 chr5 92377174 92377561 -107252589 - L2 LINE L2 -10 3262 2869 1412 203 29 21 chr5 92378936 92379241 -107250909 - AluJo SINE Alu 0 307 1 29 47 0 0 chr5 92379282 92379325 -107250825 + AT_rich Low_complexity Low_complexity 1 43 0 1436 213 8 105 chr5 92379727 92379772 -107250378 + MLT1A2 LTR MaLR 1 49 -325 2228 105 7 0 chr5 92379772 92380066 -107250084 + AluSp SINE Alu 1 296 -17 1436 213 8 105 chr5 92380066 92380420 -107249730 + MLT1A2 LTR MaLR 49 361 -13 280 248 10 79 chr5 92380434 92380535 -107249615 - L1ME LINE L1 -532 5638 5545 21 0 0 0 chr5 92381422 92381443 -107248707 + AT_rich Low_complexity Low_complexity 1 21 0 255 61 0 0 chr5 92381747 92381780 -107248370 + (GGGGA)n Simple_repeat Simple_repeat 1 33 0 2010 122 38 0 chr5 92381782 92381896 -107248254 + AluSc SINE Alu 5 113 -196 213 39 0 0 chr5 92381896 92381922 -107248228 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2010 122 38 0 chr5 92381922 92382094 -107248056 + AluSc SINE Alu 113 302 -7 441 248 0 0 chr5 92382107 92382236 -107247914 + GA-rich Low_complexity Low_complexity 2 130 0 234 97 0 0 chr5 92382304 92382335 -107247815 - U2 snRNA snRNA -153 35 5 339 252 82 41 chr5 92382360 92382507 -107247643 + MIR SINE MIR 91 243 -19 303 256 0 0 chr5 92382819 92382897 -107247253 - MER103 DNA DNA -86 80 3 614 286 116 8 chr5 92383775 92384016 -107246134 - L2 LINE L2 0 3313 3047 850 88 0 22 chr5 92384021 92384189 -107245961 + FLAM_C SINE Alu 1 165 0 2453 289 125 38 chr5 92384267 92384827 -107245323 - L2 LINE L2 -259 3054 2544 1296 206 54 68 chr5 92384827 92385195 -107244955 - MLT1A1 LTR MaLR -2 363 1 2453 289 125 38 chr5 92385195 92385998 -107244152 - L2 LINE L2 -769 2544 1572 1288 158 0 14 chr5 92385998 92386213 -107243937 + AluJb SINE Alu 83 294 -18 451 267 68 47 chr5 92386352 92386543 -107243607 - L2 LINE L2 0 3313 3119 275 347 7 41 chr5 92387082 92387229 -107242921 + MIR SINE MIR 35 176 -86 1322 178 12 0 chr5 92387284 92387542 -107242608 + L1MA3 LINE L1 6045 6305 0 253 360 54 9 chr5 92387565 92387676 -107242474 - MIR SINE MIR -130 132 17 307 194 0 42 chr5 92389182 92389254 -107240896 - L1MC4 LINE L1 -1337 6705 6637 231 319 0 0 chr5 92389538 92389607 -107240543 + (TTCA)n Simple_repeat Simple_repeat 1 69 0 195 69 0 0 chr5 92392981 92393010 -107237140 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 2232 125 25 19 chr5 92393351 92393712 -107236438 + THE1B LTR MaLR 1 363 -1 466 163 12 0 chr5 92395893 92395973 -107234177 - Tigger5 DNA MER2_type 0 2323 2243 305 310 0 0 chr5 92396164 92396252 -107233898 + polypyrimidine Low_complexity Low_complexity 1 88 0 305 298 19 50 chr5 92396332 92396493 -107233657 + MIR SINE MIR 33 188 -74 1405 198 62 25 chr5 92396529 92396882 -107233268 + MER47A DNA MER2_type 1 366 0 31311 67 5 4 chr5 92396979 92401163 -107228987 - L1PA5 LINE L1 -1071 5075 888 7023 53 3 3 chr5 92401165 92402281 -107227869 + L1PA5 LINE L1 5050 6165 0 287 348 67 39 chr5 92402393 92402571 -107227579 + MIR3 SINE MIR 20 202 -6 322 316 46 53 chr5 92402836 92402988 -107227162 + MIR3 SINE MIR 23 173 -35 291 54 0 0 chr5 92403242 92403279 -107226871 + (CA)n Simple_repeat Simple_repeat 2 38 0 23 0 0 0 chr5 92405159 92405182 -107224968 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr5 92406697 92406723 -107223427 + (T)n Simple_repeat Simple_repeat 1 26 0 2024 197 80 88 chr5 92406768 92407417 -107222733 + MLT1E1 LTR MaLR 3 646 -8 1553 140 35 73 chr5 92407655 92407969 -107222181 - AluJb SINE Alu -10 302 1 21 0 0 0 chr5 92408174 92408195 -107221955 + AT_rich Low_complexity Low_complexity 1 21 0 656 255 132 56 chr5 92408248 92408765 -107221385 + L1ME4a LINE L1 5545 6100 -21 2169 122 0 19 chr5 92408766 92409085 -107221065 - AluSq SINE Alu 0 313 1 634 300 111 26 chr5 92409271 92409658 -107220492 + Charlie8 DNA MER1_type 2 421 -1996 2440 91 0 0 chr5 92411225 92411554 -107218596 - pTR5 LTR ERV1 -2044 394 66 349 262 10 0 chr5 92411554 92411657 -107218493 - LTR30 LTR ERV1 -80 642 539 4242 138 66 33 chr5 92411657 92412626 -107217524 - pTR5 LTR ERV1 -418 2020 775 279 336 49 62 chr5 92412713 92412939 -107217211 - L2 LINE L2 -181 3091 2869 21 0 0 0 chr5 92413192 92413213 -107216937 + AT_rich Low_complexity Low_complexity 1 21 0 7630 185 30 46 chr5 92413213 92413257 -107216893 - L1MA9 LINE L1 -40 6272 6229 2192 112 0 3 chr5 92413257 92413553 -107216597 + AluSx SINE Alu 1 295 -17 7630 185 30 46 chr5 92413553 92414008 -107216142 - L1MA9 LINE L1 -83 6229 5768 285 29 0 0 chr5 92414008 92414042 -107216108 + (TG)n Simple_repeat Simple_repeat 1 34 0 7630 185 30 46 chr5 92414042 92414226 -107215924 - L1MA9 LINE L1 -544 5768 5583 1591 184 6 41 chr5 92414226 92414542 -107215608 - AluJo SINE Alu -7 305 1 7630 185 30 46 chr5 92414542 92415422 -107214728 - L1MA9 LINE L1 -729 5583 4690 2015 140 0 7 chr5 92415422 92415722 -107214428 - AluSx SINE Alu -14 298 1 7630 185 30 46 chr5 92415722 92416469 -107213681 - L1MA9 LINE L1 -1622 4690 4011 2810 10 0 0 chr5 92416469 92416775 -107213375 + AluYb8 SINE Alu 1 306 -12 7630 185 30 46 chr5 92416775 92417142 -107213008 - L1MA9 LINE L1 -2301 4011 3640 2315 149 14 14 chr5 92417920 92418342 -107211808 - L1MA9 LINE L1 -8 6304 5883 368 329 40 33 chr5 92419588 92419740 -107210410 - MER5B DNA MER1_type -25 153 1 565 259 159 18 chr5 92419994 92420214 -107209936 + L2 LINE L2 3016 3266 -47 26 0 0 0 chr5 92421493 92421519 -107208631 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 92422476 92422504 -107207646 + AT_rich Low_complexity Low_complexity 1 28 0 219 226 0 19 chr5 92423339 92423392 -107206758 - L2 LINE L2 -218 3054 3003 1898 163 7 3 chr5 92426454 92426760 -107203390 + AluJb SINE Alu 1 307 -5 21 0 0 0 chr5 92427021 92427042 -107203108 + AT_rich Low_complexity Low_complexity 1 21 0 210 237 0 0 chr5 92430413 92430451 -107199699 + (TG)n Simple_repeat Simple_repeat 1 38 0 640 227 287 4 chr5 92430769 92431020 -107199130 + MER5C DNA MER1_type 3 324 0 216 149 0 0 chr5 92432034 92432081 -107198069 + (CA)n Simple_repeat Simple_repeat 2 48 0 186 43 0 0 chr5 92433430 92433453 -107196697 + (TA)n Simple_repeat Simple_repeat 2 24 0 855 230 87 4 chr5 92433457 92433709 -107196441 - MER33 DNA MER1_type -47 277 5 2652 89 14 3 chr5 92434448 92434808 -107195342 - THE1B LTR MaLR 0 364 1 10014 110 37 34 chr5 92434808 92436384 -107193766 - THE1B-int LTR MaLR 0 1580 1 2501 124 3 3 chr5 92436384 92436748 -107193402 - THE1B LTR MaLR 0 364 1 798 316 65 23 chr5 92436872 92437350 -107192800 + LTR33A LTR ERVL 26 523 0 451 305 169 0 chr5 92437392 92437605 -107192545 + L3 LINE CR1 262 510 -1067 932 290 95 3 chr5 92437623 92437961 -107192189 + L3 LINE CR1 1208 1576 -1 2467 57 13 0 chr5 92438633 92438932 -107191218 - AluY SINE Alu -8 303 1 517 228 0 0 chr5 92438998 92439090 -107191060 - MER7A DNA MER2_type -5 341 250 * 570 180 0 90 chr5 92439087 92439209 -107190941 - MER7A DNA MER2_type -232 114 6 259 121 35 0 chr5 92439248 92439306 -107190844 + (TGAA)n Simple_repeat Simple_repeat 4 63 0 497 44 15 0 chr5 92441586 92441654 -107188496 + (TC)n Simple_repeat Simple_repeat 2 70 0 195 42 0 0 chr5 92441885 92441909 -107188241 + (CA)n Simple_repeat Simple_repeat 2 25 0 339 315 63 31 chr5 92442035 92442257 -107187893 + MIR SINE MIR 20 248 -14 2115 124 3 3 chr5 92442515 92442814 -107187336 - AluSx SINE Alu -13 299 1 268 258 0 16 chr5 92443324 92443386 -107186764 + MIR SINE MIR 96 156 -106 1484 172 127 24 chr5 92443426 92443764 -107186386 + MLT1A2 LTR MaLR 1 373 -1 291 310 33 31 chr5 92444258 92444367 -107185783 - MIR SINE MIR -62 146 38 236 227 186 31 chr5 92444402 92444457 -107185693 + MER5A DNA MER1_type 55 100 -89 1469 194 0 52 chr5 92444457 92444767 -107185383 - AluJo SINE Alu -18 294 1 236 227 186 31 chr5 92444767 92444808 -107185342 + MER5A DNA MER1_type 100 166 -23 860 159 0 0 chr5 92446174 92446300 -107183850 - FLAM_C SINE Alu -17 126 1 207 100 0 0 chr5 92446342 92446372 -107183778 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 816 205 23 18 chr5 92446962 92447133 -107183017 - FRAM SINE Alu -4 172 1 244 288 144 14 chr5 92447365 92447504 -107182646 - MER117 DNA MER1_type -18 179 23 183 80 0 0 chr5 92447932 92447957 -107182193 + (T)n Simple_repeat Simple_repeat 1 25 0 1766 54 0 0 chr5 92447975 92448197 -107181953 - L1PA5 LINE L1 0 6154 5933 2261 41 0 0 chr5 92448197 92448464 -107181686 + L1P2 LINE L1 5543 5809 -345 749 267 22 47 chr5 92448765 92449024 -107181126 - MIR SINE MIR -5 257 8 343 314 192 13 chr5 92451095 92451251 -107178899 - MIR3 SINE MIR -11 197 14 26 30 0 0 chr5 92452066 92452099 -107178051 + AT_rich Low_complexity Low_complexity 1 33 0 580 241 121 0 chr5 92454066 92454240 -107175910 + MIR SINE MIR 68 262 0 180 0 0 0 chr5 92454686 92454706 -107175444 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 1800 150 3 21 chr5 92455042 92455329 -107174821 + AluJo SINE Alu 5 286 -26 374 291 89 19 chr5 92457628 92457786 -107172364 - MIR SINE MIR -74 188 20 195 310 0 0 chr5 92457948 92458006 -107172144 - L3 LINE CR1 -2 1575 1518 4538 74 22 3 chr5 92458235 92459248 -107170902 + MER11A LTR ERVK 1 1266 0 283 320 151 32 chr5 92459248 92459467 -107170683 - L3 LINE CR1 -309 1268 1024 32 43 0 0 chr5 92460390 92460436 -107169714 + AT_rich Low_complexity Low_complexity 1 46 0 243 0 0 0 chr5 92461986 92462013 -107168137 + (A)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr5 92462060 92462081 -107168069 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 92463464 92463488 -107166662 + AT_rich Low_complexity Low_complexity 1 24 0 491 297 43 27 chr5 92464924 92465109 -107165041 - MIR SINE MIR 0 262 75 244 231 31 0 chr5 92465299 92465364 -107164786 + MIR SINE MIR 87 153 -109 1883 115 39 18 chr5 92465449 92465765 -107164385 + AluSx SINE Alu 6 312 0 193 337 50 10 chr5 92468611 92468712 -107161438 + L2 LINE L2 1765 1869 -1445 * 254 231 286 11 chr5 92468690 92468781 -107161369 + MIR SINE MIR 53 168 -94 217 279 13 13 chr5 92468798 92468877 -107161273 + (TA)n Simple_repeat Simple_repeat 2 80 0 641 335 145 30 chr5 92468999 92469722 -107160428 + L2 LINE L2 1934 2739 -575 257 373 26 85 chr5 92469800 92470106 -107160044 + L2 LINE L2 2919 3206 -66 1915 167 3 3 chr5 92470906 92471218 -107158932 - AluSx SINE Alu 0 312 1 343 199 27 22 chr5 92471504 92471731 -107158419 + (TA)n Simple_repeat Simple_repeat 1 228 0 713 304 31 27 chr5 92472718 92472978 -107157172 + MIR SINE MIR 2 262 0 207 162 0 0 chr5 92473833 92473870 -107156280 + (TG)n Simple_repeat Simple_repeat 1 37 0 398 368 87 13 chr5 92475038 92475269 -107154881 - MIR SINE MIR 0 262 15 1971 133 4 0 chr5 92475746 92476025 -107154125 + AluSx SINE Alu 1 280 -32 513 32 0 0 chr5 92476026 92476089 -107154061 + (CTAA)n Simple_repeat Simple_repeat 2 64 0 379 134 24 0 chr5 92476629 92476711 -107153439 + (TA)n Simple_repeat Simple_repeat 2 85 0 2260 125 0 0 chr5 92476712 92477024 -107153126 - AluSx SINE Alu 0 312 1 22 0 0 0 chr5 92477173 92477195 -107152955 + AT_rich Low_complexity Low_complexity 1 22 0 688 132 9 0 chr5 92477196 92477310 -107152840 - L1MA6 LINE L1 -2 6298 6184 2599 166 18 6 chr5 92477310 92477815 -107152335 - L1 LINE L1 -1360 4786 4276 539 65 11 53 chr5 92478834 92478940 -107151210 + L1 LINE L1 5240 5341 -805 1914 70 7 29 chr5 92479204 92479477 -107150673 - L1PA10 LINE L1 0 6168 5902 852 226 0 15 chr5 92479579 92479778 -107150372 - L1ME1 LINE L1 -5 6161 5966 273 262 143 0 chr5 92479778 92479862 -107150288 - U6 snRNA snRNA 0 107 12 21 57 0 0 chr5 92480765 92480800 -107149350 + AT_rich Low_complexity Low_complexity 1 35 0 234 297 31 0 chr5 92483336 92483400 -107146750 - MIR3 SINE MIR -34 174 109 621 310 115 16 chr5 92483466 92483789 -107146361 + MLT1J2 LTR MaLR 84 438 -12 1828 108 8 0 chr5 92484148 92484398 -107145752 + AluSp SINE Alu 54 305 -8 423 311 170 9 chr5 92484472 92484684 -107145466 + Charlie8 DNA MER1_type 22 267 -2150 308 170 0 0 chr5 92484684 92484737 -107145413 - Ricksha DNA DNA -2344 902 850 508 229 8 25 chr5 92484790 92484908 -107145242 - MLT2B1 LTR ERVL -66 454 339 900 274 32 16 chr5 92485029 92485277 -107144873 - MIR SINE MIR -10 252 1 278 250 15 0 chr5 92486572 92486640 -107143510 + (TA)n Simple_repeat Simple_repeat 2 70 0 1998 224 89 12 chr5 92486876 92487394 -107142756 + Charlie1a DNA MER1_type 6 563 -892 2316 270 52 30 chr5 92487394 92488323 -107141827 - L1M4 LINE L1 -1203 4943 3995 225 275 58 0 chr5 92488711 92488780 -107141370 + L1ME3A LINE L1 5565 5637 -529 534 276 35 31 chr5 92488789 92489043 -107141107 + L1ME3A LINE L1 5693 5947 -223 275 220 0 0 chr5 92489451 92489510 -107140640 + L3 LINE CR1 683 741 -836 26 0 0 0 chr5 92490497 92490523 -107139627 + AT_rich Low_complexity Low_complexity 1 26 0 203 366 36 18 chr5 92493748 92493860 -107136290 + L2 LINE L2 3200 3313 0 395 301 38 22 chr5 92496520 92496703 -107133447 - MER5A DNA MER1_type 0 189 4 21 0 0 0 chr5 92497365 92497386 -107132764 + AT_rich Low_complexity Low_complexity 1 21 0 1464 189 48 63 chr5 92499838 92500234 -107129916 - MLT1B LTR MaLR 0 390 1 277 292 53 84 chr5 92500308 92500427 -107129723 - MLT1I LTR MaLR -26 383 262 947 208 6 0 chr5 92500427 92500600 -107129550 + MER96 DNA MER1_type 2 175 0 277 292 53 84 chr5 92500600 92500764 -107129386 - MLT1I LTR MaLR -147 262 109 376 316 152 31 chr5 92500864 92501120 -107129030 - MLT1H1 LTR MaLR -8 547 255 1387 173 41 62 chr5 92501447 92501816 -107128334 - MLT1A1 LTR MaLR 0 365 5 416 239 210 23 chr5 92503121 92503297 -107126853 - MLT1H1 LTR MaLR 0 555 347 2323 74 34 0 chr5 92504168 92504465 -107125685 + AluY SINE Alu 1 307 -4 383 304 110 17 chr5 92504509 92504746 -107125404 + LTR16C LTR ERVL 233 491 0 33 25 0 0 chr5 92504783 92504823 -107125327 + AT_rich Low_complexity Low_complexity 1 40 0 227 175 0 0 chr5 92504849 92504889 -107125261 + (CAT)n Simple_repeat Simple_repeat 3 42 0 734 166 23 6 chr5 92506936 92507111 -107123039 + CT-rich Low_complexity Low_complexity 2 179 0 209 161 0 0 chr5 92507115 92507146 -107123004 + polypyrimidine Low_complexity Low_complexity 4 34 0 5661 152 8 12 chr5 92507233 92509015 -107121135 - L1PB3 LINE L1 -2 6152 4377 186 71 0 0 chr5 92509192 92509220 -107120930 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 639 269 148 9 chr5 92510242 92510465 -107119685 + MIR SINE MIR 9 262 0 180 0 0 0 chr5 92511181 92511201 -107118949 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2370 68 0 0 chr5 92511317 92511611 -107118539 + AluY SINE Alu 1 294 -17 210 37 0 0 chr5 92511617 92511644 -107118506 + (CA)n Simple_repeat Simple_repeat 2 28 0 302 164 15 0 chr5 92511644 92511705 -107118445 + (TA)n Simple_repeat Simple_repeat 1 62 0 406 323 97 65 chr5 92512193 92512813 -107117337 - L2 LINE L2 -639 2675 2036 1346 192 8 152 chr5 92512870 92512937 -107117213 - MLT2D LTR ERVL -2 412 337 491 0 17 0 chr5 92512937 92512996 -107117154 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 1346 192 8 152 chr5 92512996 92513407 -107116743 - MLT2D LTR ERVL -77 337 3 6199 160 123 72 chr5 92513408 92513659 -107116491 - ERVL-D LTR ERVL -6 5758 5521 270 0 0 0 chr5 92513659 92513689 -107116461 + (CA)n Simple_repeat Simple_repeat 2 31 0 6199 160 123 72 chr5 92513689 92514856 -107115294 - ERVL-D LTR ERVL -243 5521 4267 6368 149 28 33 chr5 92515111 92516310 -107113840 + L1MA2 LINE L1 4119 5318 -986 1832 132 31 3 chr5 92516310 92516598 -107113552 + AluSx SINE Alu 1 296 -16 6368 149 28 33 chr5 92516598 92517581 -107112569 + L1MA2 LINE L1 5318 6304 0 2347 107 0 0 chr5 92518789 92519098 -107111052 + AluSg SINE Alu 1 309 -1 342 234 246 42 chr5 92519537 92519704 -107110446 - MIR SINE MIR -2 260 60 26 30 0 0 chr5 92520628 92520661 -107109489 + AT_rich Low_complexity Low_complexity 1 33 0 24 53 0 0 chr5 92522115 92522153 -107107997 + AT_rich Low_complexity Low_complexity 1 38 0 342 98 0 0 chr5 92523328 92523379 -107106771 + (TG)n Simple_repeat Simple_repeat 2 52 0 213 65 0 0 chr5 92523695 92523726 -107106424 + (CAAAAA)n Simple_repeat Simple_repeat 4 34 0 21 0 0 0 chr5 92524526 92524547 -107105603 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr5 92524668 92524702 -107105448 + AT_rich Low_complexity Low_complexity 1 34 0 989 153 84 0 chr5 92525357 92525547 -107104603 + L1PA16 LINE L1 5951 6156 -10 185 304 0 0 chr5 92527082 92527128 -107103022 - L2 LINE L2 -1 3312 3267 237 146 0 0 chr5 92528150 92528198 -107101952 + (TC)n Simple_repeat Simple_repeat 2 49 0 219 88 0 0 chr5 92528910 92528944 -107101206 + (CA)n Simple_repeat Simple_repeat 2 35 0 22 0 0 0 chr5 92529806 92529828 -107100322 + AT_rich Low_complexity Low_complexity 1 22 0 2262 61 0 0 chr5 92530317 92530597 -107099553 - AluY SINE Alu 0 311 32 26 50 0 0 chr5 92530646 92530686 -107099464 + AT_rich Low_complexity Low_complexity 1 40 0 183 42 0 0 chr5 92530716 92530740 -107099410 + (TC)n Simple_repeat Simple_repeat 2 25 0 * 189 107 0 0 chr5 92530739 92530767 -107099383 + (TG)n Simple_repeat Simple_repeat 1 28 0 207 162 0 0 chr5 92531668 92531705 -107098445 + (TG)n Simple_repeat Simple_repeat 1 37 0 409 368 87 13 chr5 92532874 92533105 -107097045 - MIR SINE MIR 0 262 15 1933 133 4 0 chr5 92533582 92533861 -107096289 + AluSx SINE Alu 1 280 -32 513 32 0 0 chr5 92533862 92533925 -107096225 + (CTAA)n Simple_repeat Simple_repeat 2 64 0 361 138 25 0 chr5 92534465 92534545 -107095605 + (TA)n Simple_repeat Simple_repeat 2 83 0 2234 125 0 0 chr5 92534546 92534858 -107095292 - AluSx SINE Alu 0 312 1 22 0 0 0 chr5 92535007 92535029 -107095121 + AT_rich Low_complexity Low_complexity 1 22 0 694 132 9 0 chr5 92535030 92535144 -107095006 - L1MA6 LINE L1 -2 6298 6184 2642 166 18 6 chr5 92535144 92535649 -107094501 - L1 LINE L1 -1360 4786 4276 545 65 11 53 chr5 92536668 92536774 -107093376 + L1 LINE L1 5240 5341 -805 1897 70 7 29 chr5 92537038 92537311 -107092839 - L1PA10 LINE L1 0 6168 5902 859 226 0 15 chr5 92537413 92537612 -107092538 - L1ME1 LINE L1 -5 6161 5966 275 262 143 0 chr5 92537612 92537696 -107092454 - U6 snRNA snRNA 0 107 12 21 57 0 0 chr5 92538599 92538634 -107091516 + AT_rich Low_complexity Low_complexity 1 35 0 234 297 31 0 chr5 92541170 92541234 -107088916 - MIR3 SINE MIR -34 174 109 603 312 111 15 chr5 92541300 92541624 -107088526 + MLT1J2 LTR MaLR 84 438 -12 1828 108 8 0 chr5 92541983 92542233 -107087917 + AluSp SINE Alu 54 305 -8 423 311 170 9 chr5 92542307 92542519 -107087631 + Charlie8 DNA MER1_type 22 267 -2150 308 170 0 0 chr5 92542519 92542572 -107087578 - Ricksha DNA DNA -1145 901 849 508 229 8 25 chr5 92542625 92542743 -107087407 - MLT2B1 LTR ERVL -66 454 339 900 274 32 16 chr5 92542864 92543112 -107087038 - MIR SINE MIR -10 252 1 278 250 15 0 chr5 92544407 92544475 -107085675 + (TA)n Simple_repeat Simple_repeat 1 69 0 1791 221 99 11 chr5 92544711 92545176 -107084974 + Charlie1a DNA MER1_type 6 511 -944 23 0 0 0 chr5 92545667 92545690 -107084460 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr5 92547205 92547231 -107082919 + (T)n Simple_repeat Simple_repeat 1 26 0 2024 197 80 88 chr5 92547276 92547925 -107082225 + MLT1E1 LTR MaLR 3 646 -8 1553 140 35 73 chr5 92548163 92548477 -107081673 - AluJb SINE Alu -10 302 1 21 0 0 0 chr5 92548682 92548703 -107081447 + AT_rich Low_complexity Low_complexity 1 21 0 656 255 132 56 chr5 92548756 92549273 -107080877 + L1ME4a LINE L1 5545 6100 -21 2169 122 0 19 chr5 92549274 92549593 -107080557 - AluSq SINE Alu 0 313 1 634 300 111 26 chr5 92549779 92550166 -107079984 + Charlie8 DNA MER1_type 2 421 -1996 2440 91 0 0 chr5 92551733 92552062 -107078088 - pTR5 LTR ERV1 -2044 394 66 349 262 10 0 chr5 92552062 92552165 -107077985 - LTR30 LTR ERV1 -80 642 539 4242 138 66 33 chr5 92552165 92553134 -107077016 - pTR5 LTR ERV1 -418 2020 775 279 336 49 62 chr5 92553221 92553447 -107076703 - L2 LINE L2 -181 3091 2869 21 0 0 0 chr5 92553700 92553721 -107076429 + AT_rich Low_complexity Low_complexity 1 21 0 3860 192 28 44 chr5 92553721 92553765 -107076385 - L1MA9 LINE L1 -40 6272 6229 2192 112 0 3 chr5 92553765 92554061 -107076089 + AluSx SINE Alu 1 295 -17 3860 192 28 44 chr5 92554061 92554516 -107075634 - L1MA9 LINE L1 -83 6229 5768 285 29 0 0 chr5 92554516 92554550 -107075600 + (TG)n Simple_repeat Simple_repeat 1 34 0 3860 192 28 44 chr5 92554550 92554734 -107075416 - L1MA9 LINE L1 -544 5768 5583 1591 184 6 41 chr5 92554734 92555050 -107075100 - AluJo SINE Alu -7 305 1 3860 192 28 44 chr5 92555050 92555913 -107074237 - L1MA9 LINE L1 -729 5583 4750 1968 141 3 7 chr5 92555930 92556229 -107073921 - AluSx SINE Alu -14 298 1 24 53 0 0 chr5 92556749 92556787 -107073363 + AT_rich Low_complexity Low_complexity 1 38 0 34 0 0 0 chr5 92557987 92558021 -107072129 + AT_rich Low_complexity Low_complexity 1 34 0 2347 140 33 46 chr5 92559039 92559497 -107070653 - LTR47A LTR ERVL 0 452 1 300 271 73 10 chr5 92560251 92560347 -107069803 + MIR SINE MIR 90 191 -71 24 0 0 0 chr5 92561143 92561167 -107068983 + AT_rich Low_complexity Low_complexity 1 24 0 430 327 90 38 chr5 92562083 92562585 -107067565 + L2 LINE L2 2736 3271 -1 21 0 0 0 chr5 92563133 92563154 -107066996 + AT_rich Low_complexity Low_complexity 1 21 0 216 294 87 22 chr5 92565676 92565768 -107064382 - MER5A DNA MER1_type -38 151 54 185 284 90 0 chr5 92565738 92565805 -107064345 + MER5A DNA MER1_type 117 189 0 * 437 382 103 52 chr5 92566507 92568146 -107062004 + L2 LINE L2 593 2315 -999 549 392 97 14 chr5 92568161 92568535 -107061615 + L2 LINE L2 2568 2910 -362 2288 161 28 35 chr5 92568535 92568964 -107061186 - MSTB LTR MaLR 0 426 1 549 392 97 14 chr5 92568964 92569239 -107060911 + L2 LINE L2 2910 3272 0 503 358 76 51 chr5 92571604 92572132 -107058018 - L2 LINE L2 -557 2757 2217 5558 164 18 14 chr5 92572298 92574047 -107056103 - L1PB3 LINE L1 -3 6151 4395 863 38 0 0 chr5 92574047 92574153 -107055997 - L1PA4 LINE L1 -3 6152 6047 5558 164 18 14 chr5 92574153 92574426 -107055724 - L1PB3 LINE L1 -1759 4395 4125 228 282 87 56 chr5 92574572 92574767 -107055383 - L2 LINE L2 -1139 2175 1975 216 200 0 0 chr5 92576421 92576461 -107053689 + A-rich Low_complexity Low_complexity 2 41 0 34 0 0 0 chr5 92576539 92576573 -107053577 + AT_rich Low_complexity Low_complexity 1 34 0 216 188 62 0 chr5 92577914 92577962 -107052188 - L2 LINE L2 -1 3271 3221 189 74 0 0 chr5 92578870 92578897 -107051253 + (TCTA)n Simple_repeat Simple_repeat 2 28 0 4544 189 38 22 chr5 92578946 92580288 -107049862 - L1MB3 LINE L1 -4 6179 4812 2291 219 147 95 chr5 92580300 92580864 -107049286 - L1MD3 LINE L1 -1 7994 7460 465 225 22 0 chr5 92580864 92580953 -107049197 - MLT1F1 LTR MaLR -442 125 35 2291 219 147 95 chr5 92580953 92581338 -107048812 - L1MD3 LINE L1 -535 7460 6692 27 0 0 0 chr5 92584560 92584587 -107045563 + AT_rich Low_complexity Low_complexity 1 27 0 250 292 8 108 chr5 92585048 92585165 -107044985 + MIR SINE MIR 16 122 -140 2121 123 0 0 chr5 92585165 92585546 -107044604 - AluSp SINE Alu 0 381 1 250 292 8 108 chr5 92585546 92585557 -107044593 + MIR SINE MIR 121 132 -130 6220 124 47 3 chr5 92585560 92586521 -107043629 - L1MA4A LINE L1 -8 6295 5290 216 0 0 0 chr5 92586521 92586545 -107043605 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6220 124 47 3 chr5 92586545 92586615 -107043535 - L1MA4A LINE L1 -1013 5290 5225 207 0 0 0 chr5 92586618 92586641 -107043509 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1920 121 0 64 chr5 92586647 92586944 -107043206 - AluSq SINE Alu -35 278 1 23 33 0 0 chr5 92587204 92587234 -107042916 + AT_rich Low_complexity Low_complexity 1 30 0 362 273 73 36 chr5 92588979 92589144 -107041006 - MIR SINE MIR -90 172 2 537 336 23 53 chr5 92590499 92590764 -107039386 - L2 LINE L2 -1 3271 3015 782 337 58 33 chr5 92591268 92592067 -107038083 - L2 LINE L2 -1 3312 2455 248 312 52 0 chr5 92592888 92592965 -107037185 + MIR SINE MIR 63 143 -65 16705 137 105 93 chr5 92593034 92597003 -107033147 + L1P LINE L1 5 4021 -2125 11375 86 1 0 chr5 92597003 92599374 -107030776 + L1PA7 LINE L1 3763 6150 -4 181 257 0 0 chr5 92599500 92599535 -107030615 - L2 LINE L2 -17 3296 3262 24 0 0 0 chr5 92599552 92599576 -107030574 + AT_rich Low_complexity Low_complexity 1 24 0 1500 128 0 14 chr5 92600003 92600221 -107029929 - AluJb SINE Alu -13 299 85 23 54 0 0 chr5 92601249 92601286 -107028864 + AT_rich Low_complexity Low_complexity 1 37 0 29 28 0 0 chr5 92602297 92602333 -107027817 + AT_rich Low_complexity Low_complexity 1 36 0 1697 162 3 35 chr5 92602377 92602692 -107027458 - AluJo SINE Alu -7 305 1 1620 215 38 10 chr5 92603392 92603843 -107026307 - MLT1E1 LTR MaLR -38 616 50 29 0 0 0 chr5 92603897 92603926 -107026224 + AT_rich Low_complexity Low_complexity 1 29 0 369 121 36 0 chr5 92604316 92604399 -107025751 + (TA)n Simple_repeat Simple_repeat 2 87 0 622 271 129 26 chr5 92604430 92604818 -107025332 + L1ME3A LINE L1 5522 5949 -221 30 0 0 0 chr5 92604829 92604859 -107025291 + AT_rich Low_complexity Low_complexity 1 30 0 2046 148 0 6 chr5 92604859 92605170 -107024980 + AluSc SINE Alu 1 309 0 34 0 0 0 chr5 92605359 92605393 -107024757 + AT_rich Low_complexity Low_complexity 1 34 0 238 333 77 34 chr5 92605849 92605966 -107024184 + MIR SINE MIR 30 151 -111 289 279 0 0 chr5 92605970 92606038 -107024112 - L2 LINE L2 -7 3265 3198 693 313 157 35 chr5 92606043 92606558 -107023592 - MLT1K LTR MaLR -8 580 3 189 368 76 28 chr5 92606585 92606873 -107023277 - L2 LINE L2 -92 3221 2920 398 351 66 19 chr5 92606949 92607160 -107022990 - L2 LINE L2 -483 2831 2611 1038 207 14 31 chr5 92607160 92607317 -107022833 + MER20 DNA MER1_type 2 155 -64 2694 109 55 2 chr5 92607317 92607739 -107022411 + MLT2A1 LTR ERVL 1 444 0 1038 207 14 31 chr5 92607739 92607803 -107022347 + MER20 DNA MER1_type 155 219 0 594 311 109 17 chr5 92607925 92608218 -107021932 - L2 LINE L2 -882 2432 2113 3482 189 76 51 chr5 92608749 92609306 -107020844 + L1MC3 LINE L1 6785 7374 -411 1910 49 0 124 chr5 92609306 92609654 -107020496 + AluY SINE Alu 1 305 -6 3482 189 76 51 chr5 92609654 92609996 -107020154 + L1MC3 LINE L1 7374 7706 -79 332 273 110 32 chr5 92610184 92610338 -107019812 + MIR SINE MIR 47 212 -50 1778 128 34 0 chr5 92612932 92613230 -107016920 - L1MA3 LINE L1 -1 6304 5997 1051 162 26 75 chr5 92613925 92614153 -107015997 + MER20 DNA MER1_type 1 217 -2 362 21 21 0 chr5 92614269 92614316 -107015834 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 21 0 0 0 chr5 92614608 92614629 -107015521 + AT_rich Low_complexity Low_complexity 1 21 0 321 26 0 0 chr5 92614639 92614677 -107015473 + (TG)n Simple_repeat Simple_repeat 2 39 0 201 331 39 62 chr5 92615280 92615410 -107014740 + MIR3 SINE MIR 40 166 -42 650 281 105 46 chr5 92615874 92616453 -107013697 + L2 LINE L2 2684 3305 -8 1791 171 4 0 chr5 92616621 92616931 -107013219 - AluJo SINE Alu 0 311 1 23 33 0 0 chr5 92617175 92617205 -107012945 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr5 92617263 92617294 -107012856 + AT_rich Low_complexity Low_complexity 1 31 0 201 26 79 0 chr5 92617517 92617555 -107012595 + (TA)n Simple_repeat Simple_repeat 2 42 0 4628 29 0 0 chr5 92619063 92619615 -107010535 - L1PA3 LINE L1 -968 5178 4627 * 7691 17 0 0 chr5 92619614 92620562 -107009588 + L1PA3 LINE L1 5185 6132 -23 551 85 12 0 chr5 92620562 92620644 -107009506 + (TAAAG)n Simple_repeat Simple_repeat 3 85 0 619 233 83 59 chr5 92620996 92621249 -107008901 + L2 LINE L2 3040 3298 -15 442 210 61 78 chr5 92621570 92621714 -107008436 - MIR SINE MIR -62 146 5 227 191 0 21 chr5 92622883 92622930 -107007220 + MLT1K LTR MaLR 534 579 -9 2355 101 0 0 chr5 92623385 92623692 -107006458 - AluSc SINE Alu 0 309 3 192 329 29 0 chr5 92623788 92623858 -107006292 + L2 LINE L2 3102 3173 -99 180 0 0 0 chr5 92624655 92624675 -107005475 + (A)n Simple_repeat Simple_repeat 1 20 0 5405 142 30 16 chr5 92625515 92626511 -107003639 - L1MA8 LINE L1 0 7251 6242 1235 161 54 50 chr5 92626511 92626753 -107003397 - AluJo SINE Alu -64 248 6 2940 178 37 13 chr5 92626755 92627372 -107002778 - L1MA8 LINE L1 -886 6220 5589 780 191 17 0 chr5 92627378 92627556 -107002594 - L1MA8 LINE L1 -1743 5363 5183 19834 146 27 8 chr5 92627578 92627903 -107002247 - L1PA8A LINE L1 -35 7515 7197 2117 126 0 22 chr5 92627903 92628220 -107001930 - AluSx SINE Alu -2 310 1 19834 146 27 8 chr5 92628220 92632336 -106997814 - L1PA8A LINE L1 -353 7197 2568 1771 183 3 0 chr5 92632336 92632636 -106997514 - AluSx SINE Alu -9 303 3 19834 146 27 8 chr5 92632636 92632872 -106997278 - L1PA8A LINE L1 -4982 2568 2338 2052 250 59 28 chr5 92632886 92634086 -106996064 - L1MA8 LINE L1 -4567 2470 10 318 318 26 26 chr5 92634094 92634248 -106995902 + MIR SINE MIR 52 205 -57 24 0 0 0 chr5 92634268 92634292 -106995858 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr5 92634379 92634410 -106995740 + AT_rich Low_complexity Low_complexity 1 31 0 296 272 58 87 chr5 92634550 92634723 -106995427 - MIR SINE MIR -87 175 8 2164 123 0 0 chr5 92635485 92635778 -106994372 + AluSx SINE Alu 1 293 -19 545 290 21 43 chr5 92636109 92636295 -106993855 - MER5A DNA MER1_type -1 188 7 3798 178 98 26 chr5 92636693 92637497 -106992653 + MER21B LTR ERV1 1 862 -1 192 349 18 37 chr5 92640249 92640358 -106989792 + MIR SINE MIR 34 140 -122 414 305 18 0 chr5 92640360 92640524 -106989626 + MER104 DNA Tc2 13 179 -1 268 263 162 10 chr5 92640524 92640623 -106989527 + MIR SINE MIR 149 262 0 854 302 46 33 chr5 92690815 92691206 -106938944 - MLT1I LTR MaLR -13 396 1 268 222 33 11 chr5 92691676 92691766 -106938384 - L1MC4 LINE L1 -1339 6703 6612 262 321 99 38 chr5 92692076 92692207 -106937943 - L2 LINE L2 -2 3270 3132 316 320 0 0 chr5 92692257 92692335 -106937815 + L2 LINE L2 2985 3062 -210 1439 103 70 0 chr5 92693414 92693628 -106936522 + MER30 DNA MER1_type 2 230 0 21 36 0 0 chr5 92694039 92694067 -106936083 + AT_rich Low_complexity Low_complexity 1 28 0 589 283 50 0 chr5 92694378 92694576 -106935574 + LTR55 LTR ERV 1 208 -340 281 298 19 0 chr5 92695303 92695407 -106934743 + (TG)n Simple_repeat Simple_repeat 2 107 0 21 0 0 0 chr5 92696056 92696077 -106934073 + AT_rich Low_complexity Low_complexity 1 21 0 467 133 0 12 chr5 92698152 92698235 -106931915 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 808 228 228 35 chr5 92699449 92699826 -106930324 - MLT1J2 LTR MaLR 0 450 1 251 163 0 0 chr5 92700477 92700520 -106929630 + MIR SINE MIR 104 146 -116 243 0 0 0 chr5 92700717 92700744 -106929406 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 213 159 0 0 chr5 92700752 92700796 -106929354 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 27 29 0 0 chr5 92701241 92701275 -106928875 + AT_rich Low_complexity Low_complexity 1 34 0 1541 207 55 25 chr5 92701360 92701723 -106928427 - MLT1B LTR MaLR -16 374 1 604 251 6 69 chr5 92702675 92702850 -106927300 - MER91A DNA MER1_type 0 196 33 225 175 0 25 chr5 92703415 92703455 -106926695 - MER45C DNA AcHobo 0 953 915 570 308 84 5 chr5 92703473 92703687 -106926463 - MER45C DNA AcHobo -333 620 390 325 341 8 16 chr5 92703927 92704050 -106926100 - L2 LINE L2 -5 3308 3187 330 252 47 28 chr5 92705018 92705125 -106925025 + L2 LINE L2 3192 3300 -13 23 0 0 0 chr5 92705126 92705149 -106925001 + AT_rich Low_complexity Low_complexity 1 23 0 515 265 123 23 chr5 92705228 92705447 -106924703 + MIR SINE MIR 15 255 -7 190 314 98 29 chr5 92707397 92707499 -106922651 - MIR SINE MIR -66 142 34 458 330 102 10 chr5 92709430 92709636 -106920514 - MIR SINE MIR -33 229 5 1109 194 75 109 chr5 92709897 92710299 -106919851 + MLT1B LTR MaLR 1 388 -2 1199 81 0 0 chr5 92710837 92710997 -106919153 + L1PA7 LINE L1 5995 6154 0 405 186 175 62 chr5 92712377 92712554 -106917596 - MARNA DNA Mariner -62 524 328 273 292 135 0 chr5 92712564 92712653 -106917497 - L2 LINE L2 -4 3268 3168 296 297 200 13 chr5 92712653 92712808 -106917342 - MARNA DNA Mariner -271 315 132 351 0 0 0 chr5 92713872 92713911 -106916239 + (CA)n Simple_repeat Simple_repeat 1 39 0 342 0 0 0 chr5 92715435 92715473 -106914677 + (CA)n Simple_repeat Simple_repeat 2 39 0 197 304 29 29 chr5 92715651 92715720 -106914430 + L3 LINE CR1 1504 1572 -5 297 0 0 0 chr5 92715814 92715847 -106914303 + (CA)n Simple_repeat Simple_repeat 1 33 0 201 176 0 0 chr5 92718733 92718767 -106911383 + A-rich Low_complexity Low_complexity 1 34 0 810 261 30 26 chr5 92719245 92719479 -106910671 - MIR SINE MIR -26 236 2 181 388 109 15 chr5 92719989 92720190 -106909960 - L2 LINE L2 -249 3023 2804 288 282 88 55 chr5 92720375 92720556 -106909594 - MIR SINE MIR -75 187 1 209 356 72 50 chr5 92721001 92721181 -106908969 + L2 LINE L2 2682 2865 -449 * 215 292 46 0 chr5 92721158 92721223 -106908927 + L2 LINE L2 3246 3313 0 202 226 38 0 chr5 92722184 92722237 -106907913 + GA-rich Low_complexity Low_complexity 5 59 0 208 304 54 0 chr5 92722407 92722463 -106907687 - L2 LINE L2 -1 3312 3254 2377 87 0 7 chr5 92722512 92722821 -106907329 - AluSg1 SINE Alu -2 307 1 230 406 5 39 chr5 92723729 92723936 -106906214 + MIR3 SINE MIR 2 201 -7 262 293 61 0 chr5 92724076 92724158 -106905992 + L2 LINE L2 3185 3271 -1 467 296 148 0 chr5 92724239 92724442 -106905708 + MIR SINE MIR 16 248 -14 234 0 0 0 chr5 92727628 92727654 -106902496 + (T)n Simple_repeat Simple_repeat 1 26 0 304 334 97 74 chr5 92728271 92728791 -106901359 + L2 LINE L2 2742 3272 0 187 385 8 34 chr5 92729298 92729415 -106900735 + MIR SINE MIR 36 149 -59 402 351 75 31 chr5 92729492 92729879 -106900271 + MLT1J2 LTR MaLR 21 424 -22 23 0 0 0 chr5 92730078 92730101 -106900049 + AT_rich Low_complexity Low_complexity 1 23 0 234 296 56 14 chr5 92730116 92730187 -106899963 - MER91 DNA MER1_type 0 190 123 312 313 204 0 chr5 92730989 92731165 -106898985 - MIR SINE MIR -45 217 6 1974 46 0 0 chr5 92731804 92732043 -106898107 - L1PA5 LINE L1 -7 6147 5909 1873 177 28 25 chr5 92732135 92732497 -106897653 + MLT1A1 LTR MaLR 1 363 -2 392 270 0 20 chr5 92732645 92732745 -106897405 - MER94 DNA DNA -2 132 35 1022 279 74 45 chr5 92733071 92733559 -106896591 + MLT1J LTR MaLR 6 507 -4 311 143 0 14 chr5 92736799 92736869 -106893281 + (TC)n Simple_repeat Simple_repeat 2 70 0 376 350 21 31 chr5 92738356 92738550 -106891600 + MIR3 SINE MIR 12 203 -5 1969 144 3 3 chr5 92739644 92739943 -106890207 + AluSx SINE Alu 1 299 -13 603 307 135 21 chr5 92741993 92742377 -106887773 - LTR33 LTR ERVL 0 521 94 905 156 16 21 chr5 92742978 92742991 -106887159 + L1MA10 LINE L1 6144 6156 -178 327 65 0 0 chr5 92742991 92743037 -106887113 + (CA)n Simple_repeat Simple_repeat 2 47 0 905 156 16 21 chr5 92743037 92743215 -106886935 + L1MA10 LINE L1 6156 6334 0 450 333 30 0 chr5 92743433 92743565 -106886585 - L2 LINE L2 0 3272 3137 295 243 19 84 chr5 92748399 92748506 -106881644 - L2 LINE L2 0 3272 3173 589 231 48 29 chr5 92749356 92749527 -106880623 - MER69A DNA AcHobo -2 175 2 189 121 0 0 chr5 92749613 92749646 -106880504 + (TC)n Simple_repeat Simple_repeat 1 33 0 4988 56 3 5 chr5 92750422 92751063 -106879087 - L1PA7 LINE L1 -12 6142 5503 316 339 63 0 chr5 92751183 92751310 -106878840 + L2 LINE L2 3138 3272 0 789 144 8 0 chr5 92751459 92751584 -106878566 - L1MA8 LINE L1 -342 5949 5824 * 1164 157 147 27 chr5 92751582 92751881 -106878269 + L1MA8 LINE L1 5949 6283 -8 25 0 0 0 chr5 92751962 92751987 -106878163 + AT_rich Low_complexity Low_complexity 1 25 0 256 83 0 0 chr5 92753113 92753149 -106877001 - L1ME LINE L1 -340 5826 5791 * 272 61 0 102 chr5 92753117 92753166 -106876984 - L1P5 LINE L1 -326 5825 5782 350 121 34 54 chr5 92753166 92753315 -106876835 + (TA)n Simple_repeat Simple_repeat 1 146 0 393 102 0 0 chr5 92753327 92753386 -106876764 + (TG)n Simple_repeat Simple_repeat 2 60 0 2175 136 3 21 chr5 92753458 92753833 -106876317 - L1PB1 LINE L1 -2 6149 5782 401 107 25 123 chr5 92753862 92754396 -106875754 + (TA)n Simple_repeat Simple_repeat 1 481 0 237 109 38 82 chr5 92754420 92754604 -106875546 + (TA)n Simple_repeat Simple_repeat 2 177 0 390 148 35 35 chr5 92754682 92754851 -106875299 + (TA)n Simple_repeat Simple_repeat 1 169 0 873 110 4 12 chr5 92754851 92754994 -106875156 - L1ME LINE L1 -360 5791 5652 895 230 40 28 chr5 92756470 92756722 -106873428 + MIR SINE MIR 8 262 0 653 184 144 90 chr5 92759215 92759416 -106870734 + AluJo SINE Alu 1 212 -100 2812 76 3 0 chr5 92759630 92759998 -106870152 - L1PA7 LINE L1 -8 6146 5778 210 221 12 47 chr5 92760291 92760377 -106869773 + A-rich Low_complexity Low_complexity 2 84 0 207 203 0 0 chr5 92760393 92760457 -106869693 + A-rich Low_complexity Low_complexity 1 64 0 191 189 21 32 chr5 92760629 92760724 -106869426 + CT-rich Low_complexity Low_complexity 1 94 0 286 330 10 20 chr5 92761593 92761693 -106868457 - MER5A DNA MER1_type -32 157 59 534 305 48 17 chr5 92761883 92762079 -106868071 - LTR33 LTR ERVL -301 220 45 2031 73 3 21 chr5 92762142 92762429 -106867721 - AluY SINE Alu 0 311 30 187 125 25 50 chr5 92762472 92762512 -106867638 - MER5B DNA MER1_type -139 39 1 281 309 118 7 chr5 92762564 92762700 -106867450 - MIR3 SINE MIR -15 193 43 215 254 0 30 chr5 92763211 92763278 -106866872 + MER5B DNA MER1_type 114 178 0 314 295 128 60 chr5 92765759 92765993 -106864157 - MLT1J LTR MaLR -261 250 1 182 390 108 18 chr5 92766693 92767090 -106863060 + L2 LINE L2 2412 2844 -470 1912 132 14 0 chr5 92767298 92767593 -106862557 + AluSx SINE Alu 1 299 -13 1987 168 10 22 chr5 92768272 92768678 -106861472 - L1MA7 LINE L1 -1 6290 5890 2071 113 0 3 chr5 92769797 92770109 -106860041 - AluSx SINE Alu 0 311 1 1152 206 5 0 chr5 92770118 92770341 -106859809 - L1PA16 LINE L1 -21 6145 5922 23 0 0 0 chr5 92770598 92770621 -106859529 + AT_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr5 92771199 92771236 -106858914 + AT_rich Low_complexity Low_complexity 1 37 0 457 273 108 67 chr5 92771324 92771642 -106858508 - L1MC4a LINE L1 -253 5868 5538 225 133 40 13 chr5 92771651 92771726 -106858424 + (TCTA)n Simple_repeat Simple_repeat 1 77 0 315 0 0 0 chr5 92772656 92772691 -106857459 + (CA)n Simple_repeat Simple_repeat 1 35 0 2427 113 39 55 chr5 92772767 92773008 -106857142 - MSTA LTR MaLR 0 428 196 2550 38 3 10 chr5 92773008 92773321 -106856829 - AluY SINE Alu 0 311 1 2427 113 39 55 chr5 92773321 92773514 -106856636 - MSTA LTR MaLR -232 196 1 581 258 81 10 chr5 92773672 92773881 -106856269 + MER113 DNA MER1_type? 85 308 -213 250 336 0 35 chr5 92775253 92775369 -106854781 - L2 LINE L2 -1 3312 3201 * 286 320 76 80 chr5 92775336 92775586 -106854564 + MIR SINE MIR 11 259 -3 245 312 52 45 chr5 92775690 92775844 -106854306 - L2 LINE L2 -153 3119 2965 198 0 0 0 chr5 92775926 92775948 -106854202 + (TTA)n Simple_repeat Simple_repeat 3 24 0 3019 68 0 0 chr5 92775951 92776336 -106853814 - L1PA7 LINE L1 -21 6133 5749 * 3798 67 4 0 chr5 92776331 92777074 -106853076 + L1PA7 LINE L1 4994 5738 -416 185 62 0 31 chr5 92777765 92777797 -106852353 + (TA)n Simple_repeat Simple_repeat 2 32 0 24 32 0 0 chr5 92777903 92777934 -106852216 + AT_rich Low_complexity Low_complexity 1 31 0 294 73 0 0 chr5 92777936 92777977 -106852173 + (CCCTAA)n Simple_repeat Simple_repeat 2 42 0 418 236 162 14 chr5 92778480 92778628 -106851522 + MER104 DNA Tc2 10 179 -1 374 294 137 15 chr5 92778667 92778864 -106851286 - HAL1 LINE L1 -851 1656 1436 200 374 42 33 chr5 92779044 92779258 -106850892 - L2 LINE L2 -2569 745 530 21 36 0 0 chr5 92779500 92779528 -106850622 + AT_rich Low_complexity Low_complexity 1 28 0 3115 216 0 6 chr5 92781018 92781677 -106848473 + L1P LINE L1 4492 5146 -1000 629 167 0 0 chr5 92781677 92781784 -106848366 + L1PA16 LINE L1 6050 6157 -9 1093 298 28 23 chr5 92782643 92783072 -106847078 + LTR16B LTR ERVL 34 464 0 201 293 131 20 chr5 92784296 92784395 -106845755 + L2 LINE L2 3204 3313 0 300 296 49 44 chr5 92785243 92785446 -106844704 - MIR SINE MIR -2 260 57 21 0 0 0 chr5 92785447 92785468 -106844682 + AT_rich Low_complexity Low_complexity 1 21 0 217 333 69 35 chr5 92788446 92788533 -106841617 - MIR SINE MIR -147 115 26 261 231 0 0 chr5 92788720 92788772 -106841378 + MER103 DNA DNA 69 120 -46 22 35 0 0 chr5 92788918 92788947 -106841203 + AT_rich Low_complexity Low_complexity 1 29 0 311 328 103 62 chr5 92789882 92790172 -106839978 - L2 LINE L2 -132 3140 2839 307 341 11 0 chr5 92790364 92790452 -106839698 + L2 LINE L2 3189 3277 -36 276 100 0 0 chr5 92790497 92790537 -106839613 + (TCCA)n Simple_repeat Simple_repeat 4 43 0 197 330 71 35 chr5 92790661 92790858 -106839292 - L2 LINE L2 -1194 2120 1917 677 265 46 23 chr5 92790864 92791083 -106839067 - L1ME2 LINE L1 0 6164 5941 627 304 72 77 chr5 92791191 92791385 -106838765 - L1MEc LINE L1 -5288 1108 914 2272 103 3 0 chr5 92791385 92791686 -106838464 - AluY SINE Alu -9 302 1 627 304 72 77 chr5 92791686 92792397 -106837753 - L1MEc LINE L1 -5482 914 208 1543 86 209 0 chr5 92792431 92792680 -106837470 + L1P5 LINE L1 5464 5763 -388 212 254 0 18 chr5 92793063 92793118 -106837032 + GA-rich Low_complexity Low_complexity 1 54 0 1761 92 0 4 chr5 92793222 92793450 -106836700 - AluY SINE Alu -81 230 4 299 277 127 66 chr5 92793618 92794105 -106836045 - L1MEc LINE L1 -5577 819 303 225 0 0 0 chr5 92794105 92794130 -106836020 + (T)n Simple_repeat Simple_repeat 1 25 0 3615 76 17 1 chr5 92794244 92794421 -106835729 + L1PA12 LINE L1 5452 5625 -543 3615 61 21 0 chr5 92794421 92794896 -106835254 + L1PA12 LINE L1 5684 6168 0 3615 76 17 1 chr5 92794896 92794913 -106835237 + L1PA12 LINE L1 5625 6168 0 398 210 75 113 chr5 92797147 92797333 -106832817 + MIR SINE MIR 71 249 -13 256 363 35 108 chr5 92797404 92797599 -106832551 + L2 LINE L2 2954 3115 -157 1493 228 20 36 chr5 92797599 92798042 -106832108 + MER63B DNA MER1_type 1 436 0 256 363 35 108 chr5 92798042 92798190 -106831960 + L2 LINE L2 3115 3272 0 635 306 73 9 chr5 92798468 92798687 -106831463 - MIR SINE MIR -1 261 29 2718 255 55 46 chr5 92800544 92801290 -106828860 + L1MC/D LINE L1 782 1512 -4894 2360 70 0 0 chr5 92801290 92801574 -106828576 + AluY SINE Alu 1 284 -27 2718 255 55 46 chr5 92801574 92802154 -106827996 + L1MC/D LINE L1 1512 2085 -4321 876 160 0 0 chr5 92802162 92802293 -106827857 + AluSq/x SINE Alu 1 131 -181 514 239 29 90 chr5 92802331 92802443 -106827707 + MLT2B1 LTR ERVL 266 308 -212 1642 207 13 40 chr5 92802443 92802819 -106827331 - MLT1A2 LTR MaLR -4 370 5 514 239 29 90 chr5 92802819 92802933 -106827217 + MLT2B1 LTR ERVL 308 427 -93 1104 260 8 67 chr5 92802972 92803032 -106827118 + L1MC/D LINE L1 2492 2554 -3852 2099 135 0 0 chr5 92803032 92803335 -106826815 + AluSg SINE Alu 1 303 -7 1104 260 8 67 chr5 92803335 92803755 -106826395 + L1MC/D LINE L1 2554 2944 -3462 1244 223 35 7 chr5 92803755 92803921 -106826229 - AluJo SINE Alu -16 296 117 180 0 0 0 chr5 92803921 92803941 -106826209 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1244 223 35 7 chr5 92803941 92804057 -106826093 - AluJo SINE Alu -195 117 6 4443 259 74 48 chr5 92804061 92806189 -106823961 + L1MC/D LINE L1 2935 5117 -1289 1191 245 7 0 chr5 92806201 92806479 -106823671 - L1MB7 LINE L1 -9 6175 5896 1237 164 26 0 chr5 92806485 92806716 -106823434 + L1MD1 LINE L1 6006 6242 0 736 274 80 0 chr5 92806745 92806946 -106823204 - MER20 DNA MER1_type -2 217 1 899 262 14 0 chr5 92807603 92807813 -106822337 + MER58A DNA MER1_type 2 214 -10 215 245 19 0 chr5 92807896 92807949 -106822201 + GA-rich Low_complexity Low_complexity 2 55 0 262 296 155 36 chr5 92809745 92810293 -106819857 + L1MC/D LINE L1 5518 6130 -2125 372 236 110 16 chr5 92811597 92811724 -106818426 - MLT1E1 LTR MaLR -381 273 135 472 284 63 96 chr5 92812530 92812864 -106817286 - LTR16A1 LTR ERVL 0 457 135 1879 147 83 3 chr5 92813302 92813614 -106816536 - MER1B DNA MER1_type 0 337 1 358 196 36 23 chr5 92813767 92813870 -106816280 + MLT1E3 LTR MaLR 64 192 -432 * 866 253 15 15 chr5 92813865 92814067 -106816083 + MLT1E2 LTR MaLR 425 626 0 1325 217 43 89 chr5 92814112 92814641 -106815509 - MLT1D LTR MaLR 0 505 1 4273 214 44 13 chr5 92814654 92815779 -106814371 + L1MA6 LINE L1 2456 3615 -2531 * 5383 158 24 32 chr5 92815778 92817569 -106812581 + L1MA6 LINE L1 4527 6300 0 185 0 0 39 chr5 92817757 92817783 -106812367 + (TTTTA)n Simple_repeat Simple_repeat 4 28 0 226 337 42 11 chr5 92817967 92818062 -106812088 - L2 LINE L2 -32 3240 3143 686 225 6 0 chr5 92818719 92818892 -106811258 + CT-rich Low_complexity Low_complexity 4 177 0 284 0 0 27 chr5 92820186 92820223 -106809927 + (TA)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr5 92822504 92822525 -106807625 + AT_rich Low_complexity Low_complexity 1 21 0 192 329 24 24 chr5 92825527 92825612 -106804538 - L2 LINE L2 -50 3263 3179 200 322 128 38 chr5 92825722 92825933 -106804217 - MIR SINE MIR -29 233 4 * 213 357 0 0 chr5 92825900 92825956 -106804194 - L2 LINE L2 -10 3262 3207 235 346 132 17 chr5 92826542 92826831 -106803319 + L2 LINE L2 803 1124 -2190 495 349 89 26 chr5 92827029 92827533 -106802617 + L2 LINE L2 1535 2070 -1244 2115 131 123 5 chr5 92828788 92829169 -106800981 + MSTA LTR MaLR 1 426 -2 910 274 31 9 chr5 92829435 92829752 -106800398 - L1ME3A LINE L1 -213 5957 5634 243 21 85 43 chr5 92829757 92829804 -106800346 + LTR66 LTR ERVL 390 438 -172 303 188 0 16 chr5 92829807 92829871 -106800279 + L1MC4 LINE L1 6641 6703 -1339 443 280 115 22 chr5 92830972 92831154 -106798996 + MIR SINE MIR 18 216 -46 202 205 0 0 chr5 92831530 92831569 -106798581 + (TATG)n Simple_repeat Simple_repeat 4 42 0 249 244 89 140 chr5 92831855 92832733 -106797417 + L1ME3A LINE L1 2336 3168 -2978 784 281 109 33 chr5 92832803 92834340 -106795810 + L1ME3A LINE L1 4097 5951 -219 1099 246 29 58 chr5 92835229 92835575 -106794575 + MLT1E1 LTR MaLR 312 647 -7 1309 132 21 30 chr5 92837040 92837275 -106792875 - L1MA9 LINE L1 -25 6287 6055 241 262 92 3 chr5 92837629 92837761 -106792389 - MER5A DNA MER1_type 0 189 4 512 344 28 6 chr5 92838364 92838544 -106791606 - MIR SINE MIR -30 232 49 213 269 154 0 chr5 92839145 92839223 -106790927 - L2 LINE L2 0 3313 3224 301 341 143 12 chr5 92841947 92842354 -106787796 + L2 LINE L2 2271 2730 -584 21 57 0 0 chr5 92843554 92843589 -106786561 + AT_rich Low_complexity Low_complexity 1 35 0 3799 196 19 8 chr5 92844143 92844917 -106785233 - L1MA10 LINE L1 -21 6313 5531 21 36 0 0 chr5 92845477 92845505 -106784645 + AT_rich Low_complexity Low_complexity 1 28 0 242 313 61 35 chr5 92846426 92846541 -106783609 - L2 LINE L2 -4 3268 3151 22 70 0 0 chr5 92847088 92847131 -106783019 + AT_rich Low_complexity Low_complexity 1 43 0 694 214 49 126 chr5 92847167 92847517 -106782633 - MLT1G LTR MaLR -30 560 238 227 387 24 0 chr5 92847828 92847952 -106782198 - MLT1-int LTR MaLR -503 868 742 238 346 73 10 chr5 92848283 92848488 -106781662 - MLT1-int LTR MaLR -826 545 328 1409 279 174 13 chr5 92848524 92849065 -106781085 - MLT2E LTR ERVL 0 628 1 600 257 31 71 chr5 92849252 92849295 -106780855 + MIR SINE MIR 8 51 -211 2435 54 0 3 chr5 92849295 92849590 -106780560 - AluY SINE Alu -17 294 1 600 257 31 71 chr5 92849590 92849709 -106780441 + MIR SINE MIR 51 161 -101 1738 214 54 44 chr5 92849709 92850209 -106779941 + MLT1D LTR MaLR 1 505 0 600 257 31 71 chr5 92850209 92850271 -106779879 + MIR SINE MIR 161 224 -38 407 216 0 11 chr5 92850271 92850359 -106779791 + MIR SINE MIR 165 251 -11 286 183 17 0 chr5 92850367 92850427 -106779723 + L1MA8 LINE L1 6206 6266 -25 186 103 0 0 chr5 92850462 92850491 -106779659 + (TA)n Simple_repeat Simple_repeat 1 29 0 249 308 11 44 chr5 92850560 92850651 -106779499 + L2 LINE L2 3216 3303 -10 616 276 26 17 chr5 92850655 92850884 -106779266 - L1ME LINE L1 -440 5681 5486 26 64 0 0 chr5 92852015 92852062 -106778088 + AT_rich Low_complexity Low_complexity 1 47 0 29 28 0 0 chr5 92852665 92852701 -106777449 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 92852750 92852771 -106777379 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 92853799 92853829 -106776321 + AT_rich Low_complexity Low_complexity 1 30 0 185 224 0 20 chr5 92855429 92855478 -106774672 - L2 LINE L2 -4 3309 3262 271 311 25 8 chr5 92855625 92855744 -106774406 + (CATA)n Simple_repeat Simple_repeat 2 122 0 375 23 0 0 chr5 92855769 92855813 -106774337 + (CA)n Simple_repeat Simple_repeat 2 45 0 298 307 92 12 chr5 92855843 92856006 -106774144 + MIR SINE MIR 87 262 0 32 57 0 0 chr5 92856408 92856461 -106773689 + AT_rich Low_complexity Low_complexity 1 53 0 378 42 0 0 chr5 92856781 92856829 -106773321 + (TG)n Simple_repeat Simple_repeat 2 49 0 207 283 208 8 chr5 92858936 92859056 -106771094 + MIR SINE MIR 82 225 -37 317 349 19 73 chr5 92860121 92860639 -106769511 - MLT1J LTR MaLR -19 492 3 227 383 21 11 chr5 92861114 92861208 -106768942 + L2 LINE L2 3160 3254 -18 380 210 102 42 chr5 92862679 92862846 -106767304 - L1MC5 LINE L1 -421 7540 7364 2038 99 80 52 chr5 92862875 92863240 -106766910 + THE1C LTR MaLR 1 375 0 9956 131 31 8 chr5 92863240 92864779 -106765371 + THE1C-int LTR MaLR 1 1575 -5 2206 139 39 3 chr5 92864784 92865144 -106765006 + THE1C LTR MaLR 1 373 -2 357 221 48 91 chr5 92865144 92865352 -106764798 - L1MC5 LINE L1 -631 7330 7132 24 53 0 0 chr5 92866606 92866644 -106763506 + AT_rich Low_complexity Low_complexity 1 38 0 1450 157 0 25 chr5 92867737 92867972 -106762178 - AluSx SINE Alu -52 260 32 2261 104 0 3 chr5 92867980 92868277 -106761873 - AluSc SINE Alu -13 296 1 2504 186 8 2 chr5 92868536 92869019 -106761131 - L1PB2 LINE L1 -1953 4193 3708 * 5851 166 31 8 chr5 92869018 92870917 -106759233 + L1PB2 LINE L1 4208 6151 0 210 177 97 32 chr5 92871110 92871172 -106758978 + L2 LINE L2 2690 2755 -559 562 268 134 35 chr5 92871713 92871974 -106758176 - MLT1I LTR MaLR -23 386 100 23 33 0 0 chr5 92872553 92872583 -106757567 + AT_rich Low_complexity Low_complexity 1 30 0 214 211 0 19 chr5 92874065 92874117 -106756033 + (CATATA)n Simple_repeat Simple_repeat 6 56 0 382 170 58 15 chr5 92874148 92874262 -106755888 + L1MD3 LINE L1 6837 6970 -835 1440 216 76 46 chr5 92874267 92874702 -106755448 - MLT1C LTR MaLR -1 466 19 2566 196 23 78 chr5 92874717 92875577 -106754573 + L1MD3 LINE L1 6962 7995 0 2106 128 0 0 chr5 92875785 92876073 -106754077 - AluSx SINE Alu -24 288 1 25 51 0 0 chr5 92877038 92877077 -106753073 + AT_rich Low_complexity Low_complexity 1 39 0 29 0 0 0 chr5 92878292 92878321 -106751829 + AT_rich Low_complexity Low_complexity 1 29 0 892 177 63 0 chr5 92878706 92878881 -106751269 + L1PA16 LINE L1 5972 6157 -9 408 20 0 0 chr5 92879280 92879329 -106750821 + (CA)n Simple_repeat Simple_repeat 1 49 0 245 330 0 0 chr5 92879598 92879701 -106750449 + HAL1 LINE L1 811 913 -1594 256 286 158 44 chr5 92879741 92880014 -106750136 - L2 LINE L2 -571 2743 2440 225 247 35 0 chr5 92880354 92880439 -106749711 + (TA)n Simple_repeat Simple_repeat 1 88 0 218 359 19 39 chr5 92881394 92881550 -106748600 - MIR SINE MIR -47 215 63 231 264 0 0 chr5 92882911 92882964 -106747186 + GA-rich Low_complexity Low_complexity 1 53 0 1007 290 51 28 chr5 92885092 92885447 -106744703 + MLT1I LTR MaLR 41 403 -6 297 0 0 0 chr5 92885770 92885803 -106744347 + (TG)n Simple_repeat Simple_repeat 2 34 0 22 94 0 0 chr5 92886751 92886815 -106743335 + AT_rich Low_complexity Low_complexity 1 64 0 349 350 74 15 chr5 92887332 92887535 -106742615 - MIR SINE MIR -11 251 37 21 36 0 0 chr5 92887594 92887622 -106742528 + AT_rich Low_complexity Low_complexity 1 28 0 26 64 0 0 chr5 92888662 92888709 -106741441 + AT_rich Low_complexity Low_complexity 1 47 0 233 228 18 0 chr5 92890053 92890110 -106740040 + (CA)n Simple_repeat Simple_repeat 2 59 0 347 246 8 0 chr5 92897138 92897264 -106732886 + (TA)n Simple_repeat Simple_repeat 1 127 0 276 306 118 0 chr5 92898127 92898212 -106731938 + MIR3 SINE MIR 89 183 -25 2072 145 0 16 chr5 92899264 92899581 -106730569 + AluSx SINE Alu 1 312 0 207 0 0 0 chr5 92899901 92899924 -106730226 + (TG)n Simple_repeat Simple_repeat 2 24 0 739 202 0 0 chr5 92900105 92900234 -106729916 + FLAM_C SINE Alu 1 129 -4 300 91 0 0 chr5 92901482 92901526 -106728624 + (GAAA)n Simple_repeat Simple_repeat 2 45 0 2041 133 0 3 chr5 92901653 92901964 -106728186 + AluSq SINE Alu 1 310 0 1514 234 22 8 chr5 92902109 92902477 -106727673 + MLT1A2 LTR MaLR 1 373 -1 365 274 69 46 chr5 92902775 92902950 -106727200 - MIR SINE MIR 0 262 84 276 111 0 0 chr5 92904892 92904937 -106725213 + (TC)n Simple_repeat Simple_repeat 2 46 0 850 289 45 24 chr5 92906376 92906667 -106723483 - MLT1G LTR MaLR -27 563 267 5469 163 28 7 chr5 92906693 92907981 -106722169 + L1PB4 LINE L1 4843 6153 -3 682 273 45 21 chr5 92908029 92908271 -106721879 - MLT1G LTR MaLR -343 252 5 373 351 48 0 chr5 92908441 92908609 -106721541 + MIR SINE MIR 31 206 -56 212 59 29 0 chr5 92908982 92909016 -106721134 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 280 375 82 22 chr5 92909139 92909296 -106720854 - L2 LINE L2 0 3272 3095 1467 66 0 5 chr5 92909296 92909494 -106720656 + L1MA1 LINE L1 6103 6299 -3 280 375 82 22 chr5 92909494 92909568 -106720582 - L2 LINE L2 -177 3095 3027 1259 259 113 5 chr5 92909739 92910137 -106720013 + LTR16A LTR ERVL 10 450 0 22 35 0 0 chr5 92910517 92910546 -106719604 + AT_rich Low_complexity Low_complexity 1 29 0 362 298 57 0 chr5 92911005 92911129 -106719021 - MIR SINE MIR 0 262 132 258 199 23 76 chr5 92917623 92917794 -106712356 + (CACAA)n Simple_repeat Simple_repeat 2 163 0 436 158 61 9 chr5 92925994 92926108 -106704042 + THE1-int LTR MaLR 158 277 -1303 32 26 0 0 chr5 92927006 92927045 -106703105 + AT_rich Low_complexity Low_complexity 1 39 0 473 218 77 47 chr5 92927289 92927459 -106702691 - MLT1G LTR MaLR -6 584 410 264 317 0 0 chr5 92927514 92927596 -106702554 - MLT1H LTR MaLR -293 297 216 276 226 172 0 chr5 92927637 92927730 -106702420 - MLT1H LTR MaLR -355 194 86 24 0 0 0 chr5 92928078 92928102 -106702048 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 92928272 92928294 -106701856 + AT_rich Low_complexity Low_complexity 1 22 0 303 85 0 0 chr5 92929420 92929467 -106700683 + (T)n Simple_repeat Simple_repeat 1 47 0 200 250 18 0 chr5 92930249 92930305 -106699845 + (TA)n Simple_repeat Simple_repeat 2 58 0 434 34 34 0 chr5 92932108 92932167 -106697983 + (TTTC)n Simple_repeat Simple_repeat 2 62 0 259 319 16 12 chr5 92932181 92932343 -106697807 + CT-rich Low_complexity Low_complexity 2 249 0 1708 130 31 10 chr5 92932656 92932948 -106697202 - AluY SINE Alu -13 298 1 216 152 0 65 chr5 92933042 92933088 -106697062 - L2 LINE L2 -1 3312 3270 369 250 31 19 chr5 92933632 92933788 -106696362 - L1MC/D LINE L1 -309 5812 5672 2252 105 3 3 chr5 92933817 92934121 -106696029 - AluSc SINE Alu -5 304 1 760 223 97 10 chr5 92934277 92934483 -106695667 + MIR SINE MIR 37 260 -2 23 78 0 0 chr5 92934606 92934657 -106695493 + AT_rich Low_complexity Low_complexity 1 51 0 312 234 56 19 chr5 92934773 92934880 -106695270 + L1MC4a LINE L1 5568 5678 -443 228 35 0 0 chr5 92935452 92935481 -106694669 + (CAA)n Simple_repeat Simple_repeat 1 29 0 1001 133 18 24 chr5 92936130 92936295 -106693855 - THE1B LTR MaLR 0 364 201 3657 104 51 0 chr5 92936295 92936864 -106693286 - THE1-int LTR MaLR -790 790 193 189 74 0 0 chr5 92938507 92938534 -106691616 + (TG)n Simple_repeat Simple_repeat 2 28 0 592 93 0 54 chr5 92939534 92939663 -106690487 + (GAAA)n Simple_repeat Simple_repeat 2 123 0 391 306 57 0 chr5 92940115 92940239 -106689911 - MIR SINE MIR 0 262 132 23 0 0 0 chr5 92942012 92942035 -106688115 + AT_rich Low_complexity Low_complexity 1 23 0 1984 116 9 31 chr5 92942563 92942882 -106687268 + AluSx SINE Alu 1 312 0 190 261 43 72 chr5 92942903 92942972 -106687178 - MIR SINE MIR -190 72 6 405 240 51 40 chr5 92943041 92943216 -106686934 - L1MC/D LINE L1 -417 5704 5528 23 78 0 0 chr5 92943300 92943351 -106686799 + AT_rich Low_complexity Low_complexity 1 51 0 760 223 97 10 chr5 92943483 92943689 -106686461 - MIR SINE MIR -2 260 37 2328 104 0 3 chr5 92943845 92944153 -106685997 + AluSc SINE Alu 1 307 -2 407 237 19 16 chr5 92944185 92944341 -106685809 + L1MC4a LINE L1 5673 5812 -309 216 152 0 65 chr5 92944889 92944935 -106685215 + L2 LINE L2 3270 3312 -1 2082 129 0 7 chr5 92945030 92945333 -106684817 + AluY SINE Alu 1 301 -10 336 276 95 17 chr5 92945379 92945495 -106684655 + L2 LINE L2 3189 3313 0 377 318 0 58 chr5 92945557 92945711 -106684439 - MIR SINE MIR -93 169 25 275 246 172 75 chr5 92945817 92945951 -106684199 - L2 LINE L2 0 3313 3167 191 271 19 65 chr5 92946087 92946194 -106683956 - L2 LINE L2 -337 2935 2834 282 263 26 0 chr5 92946455 92946531 -106683619 + L3b LINE CR1 1392 1469 -114 234 0 0 0 chr5 92947145 92947171 -106682979 + (TA)n Simple_repeat Simple_repeat 2 27 0 444 285 40 40 chr5 92947217 92947417 -106682733 + MIR SINE MIR 13 212 -50 1222 211 67 21 chr5 92947842 92948126 -106682024 - AluJb SINE Alu -5 297 1 2080 128 0 0 chr5 92949070 92949380 -106680770 - AluSc SINE Alu 0 310 1 260 250 15 0 chr5 92949804 92949872 -106680278 + L1MC/D LINE L1 5775 5843 -1965 747 258 49 66 chr5 92950570 92950857 -106679293 + MLT1J LTR MaLR 227 508 -3 305 289 91 33 chr5 92951298 92951419 -106678731 + MIR SINE MIR 22 149 -113 254 364 20 0 chr5 92951850 92951949 -106678201 - MIR SINE MIR -109 153 53 182 37 37 0 chr5 92951972 92951999 -106678151 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 3897 70 2 0 chr5 92951999 92952498 -106677652 - L1PA7 LINE L1 -16 6138 5639 303 49 0 0 chr5 92952690 92952731 -106677419 + (CA)n Simple_repeat Simple_repeat 2 42 0 2932 6 0 0 chr5 92952749 92953067 -106677083 - AluYb8 SINE Alu 0 318 1 181 255 85 57 chr5 92953242 92953348 -106676802 + L2 LINE L2 3200 3308 -5 22 0 0 0 chr5 92953981 92954003 -106676147 + AT_rich Low_complexity Low_complexity 1 22 0 371 286 25 25 chr5 92954654 92954773 -106675377 - MIR SINE MIR -56 152 34 671 311 38 6 chr5 92954884 92955179 -106674971 + L1ME3A LINE L1 5395 5704 -462 361 290 23 0 chr5 92955180 92955311 -106674839 + L1ME3A LINE L1 5741 5874 -296 1112 216 17 45 chr5 92956522 92956809 -106673341 + AluJb SINE Alu 28 306 -6 248 400 43 9 chr5 92957272 92957387 -106672763 - MIR3 SINE MIR -40 168 50 385 300 9 0 chr5 92957405 92957515 -106672635 - MIR SINE MIR -9 253 143 475 251 152 12 chr5 92958492 92958663 -106671487 + MIR SINE MIR 36 230 -32 21 36 0 0 chr5 92958667 92958695 -106671455 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 92959381 92959402 -106670748 + AT_rich Low_complexity Low_complexity 1 21 0 919 216 47 16 chr5 92961263 92961673 -106668477 + MLT1D LTR MaLR 55 505 0 316 262 45 35 chr5 92962233 92962376 -106667774 + MLT1J2 LTR MaLR 67 213 -196 566 352 63 13 chr5 92963090 92963471 -106666679 + LTR16B LTR ERVL 1 400 -64 399 362 65 19 chr5 92963527 92963850 -106666300 + HERV16 LTR ERVL 51 388 -4608 2351 133 8 3 chr5 92964096 92964458 -106665692 - THE1B LTR MaLR 0 364 1 566 284 19 33 chr5 92964874 92965085 -106665065 + HERV16 LTR ERVL 1145 1352 -3644 764 143 26 32 chr5 92965085 92965239 -106664911 + MLT1B LTR MaLR 1 153 -237 506 312 36 23 chr5 92965356 92965577 -106664573 + HERV16 LTR ERVL 1348 1571 -3425 1821 322 69 20 chr5 92965628 92967528 -106662622 + HERV16 LTR ERVL 1707 3482 -1514 764 223 32 25 chr5 92967560 92967897 -106662253 - LTR52 LTR ERVL -37 384 1 1321 345 89 35 chr5 92968181 92969177 -106660973 + HERV16 LTR ERVL 4029 5107 -378 5968 143 55 22 chr5 92969177 92970368 -106659782 + Tigger3b DNA MER2_type 1 1230 -1 1321 345 89 35 chr5 92970368 92970611 -106659539 + HERV16 LTR ERVL 5107 5335 -150 732 325 51 45 chr5 92970737 92971072 -106659078 + LTR16B LTR ERVL 6 342 -122 321 82 0 0 chr5 92971787 92971836 -106658314 + (A)n Simple_repeat Simple_repeat 1 49 0 537 306 83 43 chr5 92972553 92972877 -106657273 + LTR16B LTR ERVL 6 342 -122 321 82 0 0 chr5 92973579 92973628 -106656522 + (A)n Simple_repeat Simple_repeat 1 49 0 181 309 73 0 chr5 92974163 92974218 -106655932 + MIR SINE MIR 201 259 -3 22 0 0 0 chr5 92974761 92974783 -106655367 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 92974957 92974981 -106655169 + AT_rich Low_complexity Low_complexity 1 24 0 315 312 140 25 chr5 92976073 92976230 -106653920 + MIR3 SINE MIR 3 177 -31 365 276 7 41 chr5 92978582 92978727 -106651423 + L2 LINE L2 3158 3297 -16 254 298 97 78 chr5 92979295 92979798 -106650352 - L2 LINE L2 -767 2547 2035 235 259 50 43 chr5 92980412 92980551 -106649599 + L2 LINE L2 3158 3297 -16 289 347 78 55 chr5 92981050 92981667 -106648483 - L2 LINE L2 -693 2621 1991 201 296 112 24 chr5 92982418 92982543 -106647607 + MIR3 SINE MIR 6 141 -67 21 36 0 0 chr5 92982787 92982815 -106647335 + AT_rich Low_complexity Low_complexity 1 28 0 257 296 130 35 chr5 92983054 92983169 -106646981 - MIR SINE MIR -122 140 15 389 20 0 20 chr5 92983221 92983272 -106646878 + (TG)n Simple_repeat Simple_repeat 2 51 0 207 0 0 0 chr5 92983271 92983294 -106646856 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 4361 117 19 4 chr5 92983346 92984029 -106646121 + L1PB3 LINE L1 5460 6152 -2 466 254 96 68 chr5 92984569 92984746 -106645404 - L2 LINE L2 -4 3309 3128 209 389 0 0 chr5 92985257 92985329 -106644821 + L2 LINE L2 3242 3313 0 2355 163 16 2 chr5 92985401 92985825 -106644325 + L1PA14 LINE L1 3896 4325 -1821 5855 102 18 1 chr5 92985937 92987524 -106642626 + L1PA14 LINE L1 4522 6152 -9 570 217 72 26 chr5 92987585 92987737 -106642413 - MIR SINE MIR -1 261 103 2404 67 0 49 chr5 92990689 92991016 -106639134 - AluY SINE Alu 0 311 1 386 89 0 67 chr5 92993248 92993338 -106636812 + (GAAA)n Simple_repeat Simple_repeat 2 85 0 781 132 22 33 chr5 92993338 92993520 -106636630 + GA-rich Low_complexity Low_complexity 1 180 0 415 319 113 51 chr5 92995382 92995994 -106634156 + L1MC4a LINE L1 5946 6595 -1213 279 225 25 12 chr5 92996007 92996087 -106634063 + L1MC5 LINE L1 6643 6723 -1238 737 304 38 40 chr5 92996565 92997012 -106633138 - MERVL LTR ERVL -875 4610 4165 319 347 65 26 chr5 92997084 92997392 -106632758 - MERVL LTR ERVL -1730 4034 3715 651 168 23 103 chr5 92997416 92997630 -106632520 + L1MC5 LINE L1 7721 7917 -44 488 269 142 46 chr5 92998067 92998522 -106631628 + MLT1G LTR MaLR 1 584 -6 32 26 0 0 chr5 92998768 92998807 -106631343 + AT_rich Low_complexity Low_complexity 1 39 0 1302 88 16 173 chr5 92999737 93000055 -106630095 - THE1C-int LTR MaLR -1312 268 1 2369 135 33 0 chr5 93000055 93000418 -106629732 - THE1C LTR MaLR 0 375 1 24 32 0 0 chr5 93000664 93000695 -106629455 + AT_rich Low_complexity Low_complexity 1 31 0 1940 161 3 0 chr5 93000702 93001006 -106629144 + AluSq SINE Alu 2 306 -7 228 35 0 0 chr5 93001530 93001559 -106628591 + (CAA)n Simple_repeat Simple_repeat 1 29 0 1035 133 12 24 chr5 93002222 93002388 -106627762 - THE1B LTR MaLR 0 364 201 5672 92 22 0 chr5 93002388 93003160 -106626990 - THE1B-int LTR MaLR -790 790 2 2191 154 5 19 chr5 93003161 93003530 -106626620 - THE1B LTR MaLR 0 364 1 418 316 53 0 chr5 93003943 93004076 -106626074 + MIR SINE MIR 20 159 -103 2493 78 0 0 chr5 93004093 93004402 -106625748 + AluY SINE Alu 1 309 -2 877 304 35 16 chr5 93004547 93004916 -106625234 + L1ME1 LINE L1 30 405 -6018 982 260 73 23 chr5 93005174 93005528 -106624622 + L1ME1 LINE L1 902 1273 -5150 2824 251 91 19 chr5 93005537 93006723 -106623427 + L1ME1 LINE L1 3573 4843 -2098 2575 251 45 40 chr5 93006739 93007514 -106622636 + L1ME1 LINE L1 5490 6277 -684 2268 194 74 52 chr5 93007514 93008152 -106621998 + MLT1E1 LTR MaLR 1 652 -2 2575 251 45 40 chr5 93008152 93008838 -106621312 + L1ME1 LINE L1 6277 6958 -3 580 323 143 11 chr5 93008860 93009232 -106620918 - MLT1J2 LTR MaLR -21 429 9 287 238 218 0 chr5 93011347 93011448 -106618702 - L2 LINE L2 -1 3271 3149 238 326 92 80 chr5 93011632 93012022 -106618128 - L2 LINE L2 -342 2972 2578 1635 274 65 30 chr5 93012320 93012893 -106617257 - MLT1E LTR MaLR 0 593 1 380 345 41 7 chr5 93013111 93013256 -106616894 + L2 LINE L2 3107 3256 -16 322 274 63 11 chr5 93013974 93014069 -106616081 + MIR SINE MIR 104 203 -59 186 43 0 0 chr5 93015875 93015898 -106614252 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 821 287 25 8 chr5 93016436 93016673 -106613477 - MIR SINE MIR -8 254 14 399 313 107 0 chr5 93016680 93016830 -106613320 + MARNA DNA Mariner 44 209 -377 204 271 17 0 chr5 93016864 93016923 -106613227 + CT-rich Low_complexity Low_complexity 5 64 0 941 287 85 6 chr5 93017071 93017399 -106612751 + MLT1A1 LTR MaLR 3 356 -9 363 254 88 23 chr5 93017662 93017872 -106612278 + MLT1K LTR MaLR 203 506 -82 375 329 84 28 chr5 93018562 93018811 -106611339 - MER115 DNA AcHobo -425 268 6 246 125 0 0 chr5 93020338 93020386 -106609764 + (T)n Simple_repeat Simple_repeat 1 48 0 22 0 0 0 chr5 93022261 93022283 -106607867 + AT_rich Low_complexity Low_complexity 1 22 0 345 62 0 0 chr5 93022687 93022735 -106607415 + (T)n Simple_repeat Simple_repeat 1 48 0 187 289 0 0 chr5 93023526 93023571 -106606579 - L3 LINE CR1 -860 717 673 22 0 0 0 chr5 93024641 93024663 -106605487 + AT_rich Low_complexity Low_complexity 1 22 0 207 242 65 0 chr5 93025426 93025488 -106604662 - MIR SINE MIR -16 246 181 557 28 14 0 chr5 93027965 93028036 -106602114 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 22 70 0 0 chr5 93028444 93028487 -106601663 + AT_rich Low_complexity Low_complexity 1 43 0 577 179 14 86 chr5 93028794 93028934 -106601216 + FLAM_C SINE Alu 4 133 0 388 215 0 0 chr5 93028942 93029007 -106601143 + AluJ/FRAM SINE Alu 217 281 -21 185 243 103 81 chr5 93029804 93029940 -106600210 - L2 LINE L2 0 3313 3175 1086 215 46 38 chr5 93030919 93031180 -106598970 + Tigger7 DNA MER2_type 2 264 -469 215 228 0 0 chr5 93031182 93031239 -106598911 + A-rich Low_complexity Low_complexity 1 57 0 504 146 34 0 chr5 93031246 93031335 -106598815 + Tigger7 DNA MER2_type 2394 2485 -2 448 272 129 18 chr5 93031843 93032060 -106598090 + MIR SINE MIR 8 248 -14 391 270 84 52 chr5 93032589 93032801 -106597349 - MIR SINE MIR -25 237 20 577 179 14 86 chr5 93034790 93034930 -106595220 + FLAM_C SINE Alu 4 133 0 313 246 0 0 chr5 93034938 93035003 -106595147 + AluJ/FRAM SINE Alu 217 281 -21 262 321 111 12 chr5 93035785 93035947 -106594203 - L2 LINE L2 0 3313 3136 2316 103 3 0 chr5 93036151 93036463 -106593687 + AluSq SINE Alu 1 313 0 1215 219 30 38 chr5 93037442 93037707 -106592443 + Tigger7 DNA MER2_type 2 264 -2223 27 62 0 0 chr5 93037707 93037755 -106592395 + AT_rich Low_complexity Low_complexity 1 48 0 583 174 0 0 chr5 93037774 93037866 -106592284 + Tigger7 DNA MER2_type 2394 2485 -2 380 199 134 70 chr5 93038398 93038613 -106591537 + MIR SINE MIR 15 248 -14 200 295 33 66 chr5 93039137 93039259 -106590891 - MIR SINE MIR -25 237 120 6515 131 33 17 chr5 93090489 93092348 -106537802 + L1MA1 LINE L1 4417 6301 -1 21 36 0 0 chr5 93092349 93092377 -106537773 + AT_rich Low_complexity Low_complexity 1 28 0 608 241 32 89 chr5 93092394 93092488 -106537662 + L1ME LINE L1 1654 1752 -4829 2135 116 3 0 chr5 93092488 93092782 -106537368 + AluSx SINE Alu 1 295 -17 608 241 32 89 chr5 93092782 93093067 -106537083 + L1ME LINE L1 1752 2042 -4539 441 54 27 14 chr5 93093788 93093862 -106536288 + (TG)n Simple_repeat Simple_repeat 2 76 0 294 308 135 0 chr5 93094434 93094619 -106535531 + L1ME LINE L1 1878 2087 -4634 262 310 82 17 chr5 93094976 93095253 -106534897 + L1ME LINE L1 2437 2693 -3847 281 308 42 0 chr5 93096072 93096192 -106533958 + L1ME LINE L1 4867 4991 -1549 21 57 0 0 chr5 93096305 93096340 -106533810 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 93096371 93096392 -106533758 + AT_rich Low_complexity Low_complexity 1 21 0 373 297 184 17 chr5 93096710 93097171 -106532979 + L1ME LINE L1 5659 6216 -299 210 350 81 32 chr5 93098047 93098170 -106531980 + L2 LINE L2 3182 3310 -3 256 324 88 22 chr5 93098183 93098319 -106531831 + MIR SINE MIR 53 197 -65 793 134 0 37 chr5 93099486 93099673 -106530477 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2114 139 0 0 chr5 93099685 93099995 -106530155 - AluSx SINE Alu -2 310 1 21 0 0 0 chr5 93100851 93100872 -106529278 + AT_rich Low_complexity Low_complexity 1 21 0 324 351 30 8 chr5 93102730 93102861 -106527289 - L2 LINE L2 -1 3271 3138 18048 34 3 0 chr5 93104687 93106910 -106523240 - L1P LINE L1 -1951 4195 1967 505 181 79 8 chr5 93108205 93108232 -106521918 - L1MA10 LINE L1 -25 6309 6283 2225 249 66 33 chr5 93108232 93109241 -106520909 - L1ME1 LINE L1 -51 6184 5139 26090 149 11 13 chr5 93109252 93112209 -106517941 - L1PA8A LINE L1 0 6446 3487 351 0 0 0 chr5 93112209 93112248 -106517902 + (TG)n Simple_repeat Simple_repeat 2 40 0 26090 149 11 13 chr5 93112248 93115674 -106514476 - L1PA8A LINE L1 -2959 3487 3 434 198 17 27 chr5 93115673 93115804 -106514346 - L1ME1 LINE L1 -1065 5150 5025 * 695 232 18 18 chr5 93115808 93115972 -106514178 - FRAM SINE Alu -2 174 11 421 47 31 0 chr5 93115999 93116063 -106514087 + (TTTCC)n Simple_repeat Simple_repeat 4 69 0 3511 239 116 25 chr5 93116081 93117375 -106512775 - L1ME1 LINE L1 -1207 5008 3597 425 228 126 29 chr5 93117381 93117432 -106512718 - L1ME1 LINE L1 -5409 987 942 460 128 26 0 chr5 93117432 93117510 -106512640 - MADE1 DNA Mariner 0 80 1 425 228 126 29 chr5 93117510 93117664 -106512486 - L1ME1 LINE L1 -5454 942 762 277 208 62 7 chr5 93117665 93117809 -106512341 + (TA)n Simple_repeat Simple_repeat 1 152 0 36 62 0 0 chr5 93118051 93118115 -106512035 + AT_rich Low_complexity Low_complexity 1 64 0 1327 274 80 80 chr5 93118115 93118235 -106511915 - L1ME1 LINE L1 -5641 755 636 1654 177 58 3 chr5 93118235 93118529 -106511621 - AluJb SINE Alu -1 311 2 1327 274 80 80 chr5 93118529 93119071 -106511079 - L1ME1 LINE L1 -5759 637 93 21 0 0 0 chr5 93119366 93119387 -106510763 + AT_rich Low_complexity Low_complexity 1 21 0 193 286 87 77 chr5 93119695 93119891 -106510259 - MIR SINE MIR -62 200 3 462 254 56 137 chr5 93122088 93122518 -106507632 + MLT1I LTR MaLR 7 401 -8 21 36 0 0 chr5 93123015 93123043 -106507107 + AT_rich Low_complexity Low_complexity 1 28 0 550 356 11 0 chr5 93123551 93123742 -106506408 - MIR SINE MIR -65 197 5 294 333 58 22 chr5 93123967 93124105 -106506045 - MIR3 SINE MIR -36 172 30 337 342 20 7 chr5 93124546 93124695 -106505455 + MIR SINE MIR 100 250 -12 2147 135 92 22 chr5 93124895 93125295 -106504855 + MSTA LTR MaLR 1 428 0 188 340 39 19 chr5 93125389 93125492 -106504658 + L2 LINE L2 2657 2761 -553 21 71 0 0 chr5 93126348 93126390 -106503760 + AT_rich Low_complexity Low_complexity 1 42 0 34 24 0 0 chr5 93126481 93126522 -106503628 + AT_rich Low_complexity Low_complexity 1 41 0 1699 151 7 21 chr5 93127177 93127468 -106502682 - AluJo SINE Alu -13 299 13 2196 106 0 3 chr5 93128368 93128669 -106501481 - AluSg SINE Alu -10 300 1 21 36 0 0 chr5 93129168 93129196 -106500954 + AT_rich Low_complexity Low_complexity 1 28 0 212 303 92 55 chr5 93133071 93133180 -106496970 - L2 LINE L2 -19 3253 3141 460 266 89 101 chr5 93133499 93133894 -106496256 + MLT1J LTR MaLR 79 468 -43 550 334 137 45 chr5 93133971 93135194 -106494956 - L2 LINE L2 0 3272 1821 237 236 28 0 chr5 93135312 93135418 -106494732 + (TA)n Simple_repeat Simple_repeat 2 110 0 234 0 0 0 chr5 93136525 93136551 -106493599 + (A)n Simple_repeat Simple_repeat 1 26 0 2053 97 7 10 chr5 93136566 93136866 -106493284 + AluSp SINE Alu 1 299 -14 299 237 0 0 chr5 93137399 93137458 -106492692 + MER63 DNA MER1_type 684 742 -320 275 275 50 0 chr5 93137468 93137548 -106492602 + MER63 DNA MER1_type 978 1061 0 626 144 17 0 chr5 93137557 93137675 -106492475 + GA-rich Low_complexity Low_complexity 1 120 0 544 305 17 17 chr5 93138495 93138669 -106491481 + MIR SINE MIR 75 248 -14 2167 114 10 0 chr5 93139005 93139311 -106490839 + AluSp SINE Alu 1 309 -4 180 125 0 0 chr5 93139475 93139507 -106490643 + (TAA)n Simple_repeat Simple_repeat 2 33 0 488 286 164 33 chr5 93140529 93140742 -106489408 - MIR SINE MIR -19 243 3 234 62 0 0 chr5 93141182 93141214 -106488936 + (A)n Simple_repeat Simple_repeat 1 32 0 284 301 13 46 chr5 93141533 93141686 -106488464 + HAL1b LINE L1 229 376 -972 535 288 43 39 chr5 93141952 93142233 -106487917 + HAL1b LINE L1 475 756 -592 227 203 16 0 chr5 93143050 93143114 -106487036 + (TAA)n Simple_repeat Simple_repeat 3 67 0 21 36 0 0 chr5 93143495 93143523 -106486627 + AT_rich Low_complexity Low_complexity 1 28 0 473 143 0 0 chr5 93143695 93143779 -106486371 + L1PA16 LINE L1 6080 6163 -3 210 299 29 11 chr5 93143819 93143993 -106486157 + (TA)n Simple_repeat Simple_repeat 2 178 0 263 270 30 0 chr5 93144286 93144386 -106485764 + L1MC4a LINE L1 3532 3634 -2512 1189 321 91 51 chr5 93144452 93145887 -106484263 + L1MC4a LINE L1 3687 5178 -968 23 0 0 0 chr5 93145945 93145968 -106484182 + AT_rich Low_complexity Low_complexity 1 23 0 382 323 45 29 chr5 93145982 93146292 -106483858 + L1MC4a LINE L1 5569 5883 -1925 399 127 0 0 chr5 93146300 93146363 -106483787 + (TG)n Simple_repeat Simple_repeat 2 64 0 21 0 0 0 chr5 93146489 93146510 -106483640 + AT_rich Low_complexity Low_complexity 1 21 0 268 339 103 42 chr5 93146811 93146976 -106483174 + MIR SINE MIR 14 188 -74 225 265 12 60 chr5 93150373 93150456 -106479694 - MIR SINE MIR -65 197 119 284 282 68 0 chr5 93151227 93151330 -106478820 + MIR SINE MIR 57 166 -96 227 346 65 0 chr5 93152152 93152259 -106477891 - MIR SINE MIR -72 190 77 33 0 0 0 chr5 93157300 93157333 -106472817 + AT_rich Low_complexity Low_complexity 1 33 0 741 272 56 36 chr5 93157450 93157700 -106472450 + MIR SINE MIR 8 262 0 279 0 0 0 chr5 93160230 93160261 -106469889 + (TG)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr5 93161209 93161230 -106468920 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr5 93161437 93161492 -106468658 + AT_rich Low_complexity Low_complexity 1 55 0 471 309 115 0 chr5 93161785 93161976 -106468174 - MIR SINE MIR -13 249 37 1806 31 0 9 chr5 93162047 93162273 -106467877 - L1P LINE L1 -1769 4377 4154 1643 211 71 0 chr5 93163075 93163398 -106466752 + MLT1A1 LTR MaLR 10 355 -10 26 0 0 0 chr5 93164499 93164525 -106465625 + AT_rich Low_complexity Low_complexity 1 26 0 2400 77 3 0 chr5 93168406 93168705 -106461445 - AluY SINE Alu -8 303 4 403 294 164 19 chr5 93169841 93170055 -106460095 - MIR SINE MIR -7 255 11 23 86 0 0 chr5 93170362 93170420 -106459730 + AT_rich Low_complexity Low_complexity 1 58 0 22 80 0 0 chr5 93170913 93170963 -106459187 + AT_rich Low_complexity Low_complexity 1 50 0 544 273 86 0 chr5 93171072 93171211 -106458939 + FRAM SINE Alu 1 151 -15 25 0 0 0 chr5 93171375 93171400 -106458750 + AT_rich Low_complexity Low_complexity 1 25 0 252 86 0 0 chr5 93171409 93171444 -106458706 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 2035 103 0 46 chr5 93171447 93171749 -106458401 - AluSq SINE Alu -25 288 1 24 32 0 0 chr5 93172032 93172063 -106458087 + AT_rich Low_complexity Low_complexity 1 31 0 408 77 0 0 chr5 93172068 93172120 -106458030 - Alu SINE Alu -19 292 241 23 0 0 0 chr5 93172170 93172193 -106457957 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 93172509 93172530 -106457620 + (A)n Simple_repeat Simple_repeat 1 21 0 247 302 0 0 chr5 93172545 93172608 -106457542 + GA-rich Low_complexity Low_complexity 4 66 0 1479 223 28 53 chr5 93172927 93173054 -106457096 - L1MB7 LINE L1 -9 6175 6049 2873 239 46 52 chr5 93173054 93175156 -106454994 - L1MC4 LINE L1 -466 6529 4810 2512 106 16 3 chr5 93175159 93175527 -106454623 + THE1C LTR MaLR 3 375 0 1314 219 54 26 chr5 93175542 93175930 -106454220 - L1MC4 LINE L1 -5222 1637 1239 303 273 37 74 chr5 93176173 93176389 -106453761 + L1M4 LINE L1 3729 3936 -2210 359 255 11 0 chr5 93176391 93176485 -106453665 + L1ME3A LINE L1 5857 5951 -219 23 33 0 0 chr5 93176505 93176535 -106453615 + AT_rich Low_complexity Low_complexity 1 30 0 329 256 82 36 chr5 93176548 93176743 -106453407 + L1ME3A LINE L1 5963 6166 -4 374 195 115 9 chr5 93176753 93176866 -106453284 + L1MA10 LINE L1 6210 6334 0 958 248 24 4 chr5 93177963 93178209 -106451941 + MIR SINE MIR 12 262 0 21 0 0 0 chr5 93178279 93178300 -106451850 + AT_rich Low_complexity Low_complexity 1 21 0 2529 110 13 5 chr5 93178336 93178708 -106451442 + THE1C LTR MaLR 1 375 0 24 0 0 0 chr5 93179043 93179067 -106451083 + AT_rich Low_complexity Low_complexity 1 24 0 662 248 31 0 chr5 93179398 93179559 -106450591 + LTR16A1 LTR ERVL 1 166 -291 216 149 0 0 chr5 93179840 93179887 -106450263 + (TG)n Simple_repeat Simple_repeat 1 47 0 186 43 0 0 chr5 93179933 93179956 -106450194 + (CA)n Simple_repeat Simple_repeat 2 24 0 22 70 0 0 chr5 93180257 93180300 -106449850 + AT_rich Low_complexity Low_complexity 1 43 0 28 61 0 0 chr5 93181562 93181611 -106448539 + AT_rich Low_complexity Low_complexity 1 49 0 2038 157 14 0 chr5 93181664 93182015 -106448135 - L1PB3 LINE L1 -7 6147 5792 252 244 47 0 chr5 93182048 93182134 -106448016 + L1MC4 LINE L1 6614 6703 -1339 1099 176 5 34 chr5 93182164 93182369 -106447781 - L1PB3 LINE L1 -375 5779 5581 1942 129 31 67 chr5 93182615 93182972 -106447178 + THE1B LTR MaLR 1 344 -20 25 51 0 0 chr5 93183313 93183352 -106446798 + AT_rich Low_complexity Low_complexity 1 39 0 204 135 0 0 chr5 93184001 93184038 -106446112 + (GA)n Simple_repeat Simple_repeat 1 37 0 2825 231 45 25 chr5 93184044 93185229 -106444921 + L1MCb LINE L1 768 2071 -4493 25814 152 10 16 chr5 93185229 93186430 -106443720 + L1PA8 LINE L1 2 1208 -5279 321 26 0 0 chr5 93186430 93186468 -106443682 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 25814 152 10 16 chr5 93186468 93191734 -106438416 + L1PA8 LINE L1 1208 6487 0 2877 111 73 0 chr5 93191859 93192309 -106437841 + L1PA16 LINE L1 5675 6157 -9 2843 251 51 32 chr5 93192326 93193836 -106436314 + L1MCb LINE L1 2150 3638 -2926 2156 132 0 0 chr5 93193836 93194146 -106436004 + AluSq SINE Alu 3 312 -1 2843 251 51 32 chr5 93194146 93194208 -106435942 + L1MCb LINE L1 3638 3697 -2867 25 31 0 0 chr5 93194955 93194987 -106435163 + AT_rich Low_complexity Low_complexity 1 32 0 180 152 0 0 chr5 93195044 93195077 -106435073 + (TA)n Simple_repeat Simple_repeat 1 33 0 284 231 67 75 chr5 93195232 93195366 -106434784 - MLT1J2 LTR MaLR -214 236 104 1906 201 6 4 chr5 93195658 93196113 -106434037 + MLT2B2 LTR ERVL 1 504 -11 330 287 81 35 chr5 93196113 93196287 -106433863 - L1MC/D LINE L1 -2300 5508 5327 1267 259 37 39 chr5 93196744 93197150 -106433000 - LTR40b LTR ERVL 0 462 58 22 80 0 0 chr5 93197304 93197354 -106432796 + AT_rich Low_complexity Low_complexity 1 50 0 1841 133 85 25 chr5 93197370 93197724 -106432426 - THE1C LTR MaLR 0 375 1 5863 128 1 5 chr5 93197724 93198578 -106431572 - THE1C-int LTR MaLR 0 1580 730 719 130 99 8 chr5 93198583 93198714 -106431436 - THE1C LTR MaLR -232 143 1 2080 145 3 0 chr5 93198947 93199257 -106430893 - AluSq SINE Alu -2 311 1 359 322 100 46 chr5 93199723 93199933 -106430217 + MIR SINE MIR 11 237 -25 911 265 46 22 chr5 93199933 93200257 -106429893 - HsTC2c DNA Tc2 0 729 398 1457 266 66 26 chr5 93200257 93200631 -106429519 - HsTC2c DNA MER2_type 0 729 4 359 322 100 46 chr5 93200631 93200659 -106429491 + MIR SINE MIR 237 262 0 3461 202 50 10 chr5 93200825 93201638 -106428512 + L1MC3 LINE L1 5765 6610 -1175 545 71 0 0 chr5 93201640 93201710 -106428440 + HERV17 LTR ERV1 5950 6019 -2607 266 105 0 0 chr5 93201704 93201742 -106428408 + HERV17 LTR ERV1 7511 7548 -1078 * 2283 82 3 0 chr5 93201732 93202023 -106428127 + HERV17 LTR ERV1 8335 8626 0 5780 90 16 0 chr5 93202023 93202791 -106427359 + LTR17 LTR ERV1 1 780 0 1271 158 57 36 chr5 93202791 93203070 -106427080 - L1MA7 LINE L1 -79 6212 5928 4131 183 55 33 chr5 93203127 93203624 -106426526 + L1MC3 LINE L1 6769 7254 -531 1941 203 21 0 chr5 93203624 93204013 -106426137 + MLT2C1 LTR ERVL 1 397 0 4131 183 55 33 chr5 93204013 93204177 -106425973 + L1MC3 LINE L1 7254 7413 -372 1392 252 20 44 chr5 93204177 93204582 -106425568 + MSTD LTR MaLR 2 396 0 4131 183 55 33 chr5 93204582 93204755 -106425395 + L1MC3 LINE L1 7413 7581 -204 212 0 36 0 chr5 93204755 93204783 -106425367 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1535 200 7 24 chr5 93204785 93205080 -106425070 - AluJo SINE Alu -22 290 1 4131 183 55 33 chr5 93205080 93205228 -106424922 + L1MC3 LINE L1 7581 7777 -8 21 71 0 0 chr5 93205690 93205732 -106424418 + AT_rich Low_complexity Low_complexity 1 42 0 239 325 56 56 chr5 93206983 93207143 -106423007 + MIR SINE MIR 66 225 -37 256 211 0 14 chr5 93207759 93207830 -106422320 + (TTA)n Simple_repeat Simple_repeat 3 72 0 9640 150 52 25 chr5 93208211 93210007 -106420143 + L1PA6 LINE L1 11 1856 -4290 4872 65 1 22 chr5 93210012 93210660 -106419490 - L1PA5 LINE L1 -1 6153 5519 2284 107 0 0 chr5 93210662 93210961 -106419189 + AluY SINE Alu 1 299 -12 21616 79 2 3 chr5 93210961 93214791 -106415359 + L1PA6 LINE L1 2323 6148 -6 239 70 0 23 chr5 93215291 93215334 -106414816 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 333 0 0 0 chr5 93215483 93215520 -106414630 + (TG)n Simple_repeat Simple_repeat 1 37 0 1079 234 78 85 chr5 93215638 93216074 -106414076 - MLT1J2 LTR MaLR -17 433 1 741 262 104 73 chr5 93217165 93217588 -106412562 - MLT1J2 LTR MaLR -14 436 1 922 247 235 34 chr5 93218049 93218522 -106411628 + MLT1E LTR MaLR 26 593 0 318 341 108 7 chr5 93218804 93219036 -106411114 - MIR SINE MIR -3 259 6 7467 30 19 5 chr5 93219082 93220040 -106410110 - L1PA3 LINE L1 -7 6148 5188 269 288 43 4 chr5 93220258 93220375 -106409775 - MIR SINE MIR -63 145 42 236 333 116 31 chr5 93222090 93222219 -106407931 + L2 LINE L2 3173 3312 -1 414 287 126 64 chr5 93224531 93224904 -106405246 + MLT1J LTR MaLR 116 511 0 22 0 0 0 chr5 93226055 93226077 -106404073 + AT_rich Low_complexity Low_complexity 1 22 0 233 218 0 18 chr5 93226094 93226149 -106404001 + (TTCA)n Simple_repeat Simple_repeat 1 54 0 333 0 0 0 chr5 93226600 93226637 -106403513 + (TC)n Simple_repeat Simple_repeat 2 38 0 * 442 68 0 27 chr5 93226636 93226709 -106403441 + (TA)n Simple_repeat Simple_repeat 1 71 0 21 36 0 0 chr5 93228071 93228099 -106402051 + AT_rich Low_complexity Low_complexity 1 28 0 491 211 47 149 chr5 93228504 93228826 -106401324 - L2 LINE L2 -1 3312 3024 4824 231 5 7 chr5 93228978 93230133 -106400017 - L1P LINE L1 -949 5197 4045 1620 179 33 97 chr5 93230434 93230824 -106399326 + MLT1A1 LTR MaLR 1 365 0 216 130 0 0 chr5 93232695 93232741 -106397409 + (A)n Simple_repeat Simple_repeat 1 46 0 364 183 12 12 chr5 93232762 93232844 -106397306 - MLT1E1 LTR MaLR 0 654 573 2047 129 3 7 chr5 93232859 93233203 -106396947 + AluSx SINE Alu 1 312 0 843 240 32 44 chr5 93233203 93233349 -106396801 - MLT1E1 LTR MaLR -406 248 105 1971 138 44 0 chr5 93233349 93233646 -106396504 - AluSx SINE Alu -2 310 1 843 240 32 44 chr5 93233646 93233749 -106396401 - MLT1E1 LTR MaLR -549 105 2 2238 107 0 0 chr5 93233749 93234048 -106396102 - AluSg SINE Alu -11 299 1 956 279 50 26 chr5 93234529 93234906 -106395244 - MLT1I LTR MaLR -23 386 1 258 81 0 0 chr5 93236271 93236308 -106393842 + (TG)n Simple_repeat Simple_repeat 1 37 0 239 248 8 137 chr5 93236369 93236486 -106393664 + MER102a DNA MER1_type 222 323 -7 239 261 174 11 chr5 93236607 93236699 -106393451 + MIR SINE MIR 129 235 -27 180 80 0 240 chr5 93236676 93236726 -106393424 + L2 LINE L2 3217 3254 -18 * 295 316 11 32 chr5 93236762 93236857 -106393293 + MIR SINE MIR 7 99 -163 216 277 53 21 chr5 93238737 93238831 -106391319 - L2 LINE L2 -927 2387 2291 486 246 159 78 chr5 93238836 93239145 -106391005 - MER46C DNA MER2_type -4 334 1 489 241 57 0 chr5 93239439 93239597 -106390553 - L1ME4a LINE L1 -4 6117 5951 530 220 17 17 chr5 93242540 93242658 -106387492 + FLAM_C SINE Alu 1 118 -25 226 250 52 81 chr5 93242783 93242811 -106387339 - HAL1 LINE L1 -31 2476 2449 2172 114 7 0 chr5 93242811 93243109 -106387041 - AluSq SINE Alu -13 300 1 226 250 52 81 chr5 93243109 93243216 -106386934 - HAL1 LINE L1 -58 2449 2345 2017 274 85 43 chr5 93243216 93243520 -106386630 - HAL1 LINE L1 -122 2385 2095 1511 132 21 155 chr5 93243520 93243953 -106386197 + THE1C LTR MaLR 1 375 0 2017 274 85 43 chr5 93243953 93244988 -106385162 - HAL1 LINE L1 -412 2095 990 22 88 0 0 chr5 93246002 93246059 -106384091 + AT_rich Low_complexity Low_complexity 1 57 0 1135 201 4 18 chr5 93247103 93247332 -106382818 + AluJb SINE Alu 87 312 0 227 344 89 0 chr5 93247335 93247425 -106382725 + MIR SINE MIR 42 139 -69 664 295 161 22 chr5 93250420 93250868 -106379282 - MLT1L LTR MaLR -22 593 84 413 346 39 17 chr5 93251654 93251833 -106378317 - MIR SINE MIR -75 187 5 217 286 62 27 chr5 93252155 93252267 -106377883 + L2 LINE L2 2599 2714 -600 244 274 40 125 chr5 93252274 93252520 -106377630 + L1MDa LINE L1 404 1011 -5529 3852 225 81 14 chr5 93252659 93253885 -106376265 + L1MDa LINE L1 1010 2317 -4223 965 309 70 34 chr5 93254021 93254573 -106375577 + L2 LINE L2 2739 3313 0 237 286 55 11 chr5 93256468 93256559 -106373591 - MIR SINE MIR -70 138 44 1530 104 126 0 chr5 93256589 93256859 -106373291 - L1MA5A LINE L1 0 6297 5994 257 345 108 32 chr5 93259409 93259751 -106370399 - L2 LINE L2 -782 2532 2165 299 234 39 0 chr5 93260870 93260947 -106369203 + MER103 DNA DNA 45 124 -42 514 302 55 22 chr5 93261122 93261397 -106368753 + LTR16A1 LTR ERVL 159 442 -15 249 179 0 0 chr5 93261564 93261603 -106368547 - MER115 DNA AcHobo -7 686 648 521 293 169 12 chr5 93261827 93262076 -106368074 - Zaphod DNA AcHobo -3653 378 91 368 40 20 0 chr5 93262076 93262126 -106368024 + (TG)n Simple_repeat Simple_repeat 2 52 0 22 35 0 0 chr5 93264431 93264460 -106365690 + AT_rich Low_complexity Low_complexity 1 29 0 559 176 122 103 chr5 93265031 93265293 -106364857 + L1ME LINE L1 5538 5804 -366 238 290 60 0 chr5 93265298 93265398 -106364752 + Looper DNA T2_type 865 970 -588 * 644 220 69 6 chr5 93265385 93265558 -106364592 + Looper DNA T2_type 1374 1557 -1 13784 141 42 12 chr5 93265585 93266074 -106364076 - Tigger1 DNA MER2_type 0 2418 1945 2388 70 0 0 chr5 93266074 93266373 -106363777 - AluY SINE Alu -12 299 1 13784 141 42 12 chr5 93266373 93268231 -106361919 - Tigger1 DNA MER2_type -473 1945 2 2437 206 31 30 chr5 93268386 93268454 -106361696 + MLT2B2 LTR ERVL 1 67 -448 886 217 159 5 chr5 93268454 93268661 -106361489 + MER8 DNA MER2_type 1 239 0 2437 206 31 30 chr5 93268661 93269101 -106361049 + MLT2B2 LTR ERVL 67 510 -5 1327 226 77 3 chr5 93269499 93269848 -106360302 - MER63 DNA MER1_type -1 1060 686 739 256 132 0 chr5 93269843 93270101 -106360049 - MER63 DNA MER1_type -769 292 1 * 186 43 0 0 chr5 93270519 93270542 -106359608 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 1789 203 27 11 chr5 93270827 93270881 -106359269 - MLT2B2 LTR ERVL 0 554 502 414 0 0 0 chr5 93270881 93270927 -106359223 + (CA)n Simple_repeat Simple_repeat 2 47 0 1789 203 27 11 chr5 93270927 93271325 -106358825 - MLT2B2 LTR ERVL -52 502 1 1974 224 92 12 chr5 93271330 93271829 -106358321 + MER34 LTR ERV1 1 539 -3 2094 119 6 10 chr5 93272313 93272625 -106357525 - AluSx SINE Alu -1 311 1 37 52 0 0 chr5 93274890 93274948 -106355202 + AT_rich Low_complexity Low_complexity 1 58 0 200 114 45 0 chr5 93275196 93275240 -106354910 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 815 263 16 0 chr5 93275839 93276033 -106354117 + MIR SINE MIR 64 260 -2 419 291 8 0 chr5 93276082 93276209 -106353941 + MER94 DNA DNA 6 133 -1 360 302 17 17 chr5 93276284 93276400 -106353750 - MIR3 SINE MIR -5 203 88 197 314 71 0 chr5 93276658 93276728 -106353422 + MER5B DNA MER1_type 84 158 -20 351 228 215 20 chr5 93277321 93277470 -106352680 - MER5B DNA MER1_type 0 178 1 256 291 64 100 chr5 93277582 93277746 -106352404 + MIR SINE MIR 47 203 -59 1697 178 3 34 chr5 93277746 93278066 -106352084 + AluJb SINE Alu 3 312 0 256 291 64 100 chr5 93278066 93278121 -106352029 + MIR SINE MIR 203 258 -4 1881 196 32 8 chr5 93278462 93278521 -106351629 - MLT2B1 LTR ERVL 0 520 464 513 32 0 0 chr5 93278521 93278584 -106351566 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 1881 196 32 8 chr5 93278584 93278983 -106351167 - MLT2B1 LTR ERVL -56 464 1 203 171 0 0 chr5 93279347 93279382 -106350768 + (CATA)n Simple_repeat Simple_repeat 2 36 0 216 111 0 0 chr5 93281084 93281120 -106349030 + (TAG)n Simple_repeat Simple_repeat 2 37 0 2182 267 93 22 chr5 93281314 93282003 -106348147 + L1ME3A LINE L1 4711 5349 -821 1343 232 96 19 chr5 93282003 93282369 -106347781 - MSTD LTR MaLR -2 394 1 2182 267 93 22 chr5 93282369 93283037 -106347113 + L1ME3A LINE L1 5349 6165 -5 303 191 0 0 chr5 93284814 93284877 -106345273 + (TA)n Simple_repeat Simple_repeat 1 63 0 1592 185 3 30 chr5 93284886 93285184 -106344966 - AluJo SINE Alu -22 290 1 837 257 35 67 chr5 93285897 93286212 -106343938 - MLT1I LTR MaLR -14 395 91 221 313 70 23 chr5 93286430 93286558 -106343592 - MIR SINE MIR -48 214 81 24 0 0 0 chr5 93286900 93286924 -106343226 + AT_rich Low_complexity Low_complexity 1 24 0 239 292 39 110 chr5 93287360 93287514 -106342636 - MER5A DNA MER1_type 0 189 47 758 251 27 5 chr5 93288576 93288763 -106341387 - MER20 DNA MER1_type 0 219 29 260 274 226 0 chr5 93289260 93289366 -106340784 + L2 LINE L2 3184 3313 0 1623 173 84 29 chr5 93289375 93289721 -106340429 - MLT1A1 LTR MaLR 0 365 1 1115 112 0 29 chr5 93290652 93290822 -106339328 - AluSg/x SINE Alu -4 308 144 384 324 85 17 chr5 93291119 93291490 -106338660 - MLT1J LTR MaLR -103 408 1 334 255 198 9 chr5 93292150 93292256 -106337894 + L2 LINE L2 3187 3312 -1 207 0 0 0 chr5 93292883 93292906 -106337244 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 185 393 64 23 chr5 93292934 93293107 -106337043 - MIR3 SINE MIR -6 202 23 306 0 0 0 chr5 93293558 93293592 -106336558 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 21 71 0 0 chr5 93294647 93294689 -106335461 + AT_rich Low_complexity Low_complexity 1 42 0 1900 276 263 72 chr5 93295320 93295616 -106334534 - L2 LINE L2 0 3313 3075 189 0 0 0 chr5 93295616 93295637 -106334513 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 1900 276 263 72 chr5 93295637 93295810 -106334340 - L2 LINE L2 -238 3075 2936 1309 201 15 96 chr5 93295810 93296057 -106334093 + MLT1A1 LTR MaLR 1 206 -159 2037 93 8 0 chr5 93296057 93296325 -106333825 + AluSx SINE Alu 34 303 -9 1309 201 15 96 chr5 93296325 93296474 -106333676 + MLT1A1 LTR MaLR 206 365 0 1900 276 263 72 chr5 93296474 93298452 -106331698 - L2 LINE L2 -377 2936 386 31 44 0 0 chr5 93299066 93299111 -106331039 + AT_rich Low_complexity Low_complexity 1 45 0 262 217 167 0 chr5 93299208 93299268 -106330882 - MER58A DNA MER1_type -31 76 7 440 250 18 0 chr5 93299268 93299380 -106330770 + MER96B DNA MER1_type? 296 409 -8 7379 250 48 17 chr5 93299410 93299695 -106330455 + L1MA9 LINE L1 11 286 -5924 2124 123 53 17 chr5 93299695 93300054 -106330096 - THE1C LTR MaLR -3 372 1 7379 250 48 17 chr5 93300054 93304015 -106326135 + L1MA9 LINE L1 286 4104 -2106 4092 198 18 28 chr5 93304031 93305856 -106324294 + L1MA9 LINE L1 4565 6343 -33 499 278 78 78 chr5 93307137 93307483 -106322667 - L2 LINE L2 -97 3216 2871 2160 239 38 12 chr5 93307615 93308193 -106321957 - L1ME1 LINE L1 -4 6162 5570 2149 115 3 3 chr5 93308438 93308734 -106321416 - AluSx SINE Alu -14 298 3 27 0 0 0 chr5 93310252 93310279 -106319871 + AT_rich Low_complexity Low_complexity 1 27 0 2267 53 0 36 chr5 93310283 93310585 -106319565 - AluY SINE Alu -18 293 3 390 337 17 40 chr5 93310896 93311071 -106319079 + MIR SINE MIR 21 191 -71 1388 199 23 30 chr5 93313079 93313381 -106316769 - AluJo SINE Alu -6 306 7 13614 145 28 19 chr5 93313520 93315915 -106314235 - Tigger1 DNA MER2_type -1 2417 1 366 329 133 42 chr5 93315971 93316302 -106313848 + L2 LINE L2 2949 3309 -4 487 325 86 30 chr5 93316736 93317004 -106313146 + L3b LINE CR1 1238 1520 -63 607 307 87 14 chr5 93319186 93319404 -106310746 + MIR SINE MIR 29 262 0 805 210 32 27 chr5 93320122 93320308 -106309842 + MER5A DNA MER1_type 2 188 -1 439 198 207 18 chr5 93322306 93322417 -106307733 + MER5A DNA MER1_type 57 188 -1 398 123 86 12 chr5 93322525 93322606 -106307544 + MER53 DNA DNA 103 189 0 384 311 104 52 chr5 93323239 93323760 -106306390 + L1ME3 LINE L1 461 1008 -5111 409 258 36 16 chr5 93323953 93324147 -106306003 + L1ME3 LINE L1 1176 1373 -4937 1004 306 92 31 chr5 93324325 93325347 -106304803 + L1ME3 LINE L1 3928 5011 -1118 3447 94 0 0 chr5 93325378 93325844 -106304306 - MER41A LTR ERV1 -88 466 1 10237 104 33 6 chr5 93325844 93327358 -106302792 - MER41A-int LTR ERV1 -2 5944 4390 1105 297 86 26 chr5 93327536 93328186 -106301964 + L1ME3 LINE L1 5242 5930 -215 1465 224 4 0 chr5 93328242 93328519 -106301631 + AluJo SINE Alu 3 280 -32 309 51 0 0 chr5 93328525 93328564 -106301586 + (CA)n Simple_repeat Simple_repeat 2 40 0 226 233 50 0 chr5 93329093 93329153 -106300997 - L2 LINE L2 -5 3308 3246 425 293 107 28 chr5 93329396 93329649 -106300501 - MER102b DNA MER1_type 0 341 69 2575 237 23 20 chr5 93329973 93330623 -106299527 + Tigger8 DNA MER2_type 1 652 -14 412 266 14 43 chr5 93331023 93331162 -106298988 - MIR SINE MIR -119 143 9 693 234 93 77 chr5 93332005 93332369 -106297781 + LTR16A1 LTR ERVL 12 381 -76 1229 198 19 129 chr5 93332381 93332791 -106297359 - MLT1A1 LTR MaLR 0 365 1 5987 155 6 19 chr5 93333628 93335338 -106294812 + L1PB1 LINE L1 4096 5780 -371 516 45 0 0 chr5 93335338 93335405 -106294745 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 5987 155 6 19 chr5 93335405 93335764 -106294386 + L1PB1 LINE L1 5780 6142 -9 417 308 141 45 chr5 93336105 93336459 -106293691 - L2 LINE L2 -5 3308 2921 444 295 0 22 chr5 93336585 93336724 -106293426 - MER45C DNA AcHobo -2 951 816 354 176 0 29 chr5 93336969 93337037 -106293113 - MER45C DNA AcHobo -146 807 742 21 0 0 0 chr5 93337397 93337418 -106292732 + AT_rich Low_complexity Low_complexity 1 21 0 267 331 102 13 chr5 93337669 93337826 -106292324 - MIR SINE MIR -89 173 3 704 162 6 98 chr5 93339904 93340077 -106290073 - MER20 DNA MER1_type -36 183 27 362 243 34 57 chr5 93341063 93341215 -106288935 + MLT1J1 LTR MaLR 66 214 -195 1386 117 50 50 chr5 93341744 93342025 -106288125 - MER44D DNA MER2_type -57 552 2 467 257 18 0 chr5 93342925 93343034 -106287116 + MER81 DNA DNA 3 113 -1 23 0 0 0 chr5 93346274 93346297 -106283853 + AT_rich Low_complexity Low_complexity 1 23 0 634 243 124 6 chr5 93346906 93347075 -106283075 + MER5A DNA MER1_type 1 189 0 21 36 0 0 chr5 93347146 93347174 -106282976 + AT_rich Low_complexity Low_complexity 1 28 0 301 289 39 94 chr5 93347191 93347371 -106282779 - MIR SINE MIR -50 212 43 689 250 17 6 chr5 93348912 93349088 -106281062 - MER97a DNA MER1_type? -716 178 1 4648 199 129 44 chr5 93349417 93349570 -106280580 + L1MC4 LINE L1 6475 6614 -1428 441 81 0 0 chr5 93349570 93349632 -106280518 + (TG)n Simple_repeat Simple_repeat 2 63 0 4648 199 129 44 chr5 93349632 93350661 -106279489 + L1MC4 LINE L1 6614 7812 -230 276 30 0 0 chr5 93350661 93350694 -106279456 + (CA)n Simple_repeat Simple_repeat 2 34 0 4648 199 129 44 chr5 93350694 93350947 -106279203 + L1MC4 LINE L1 7812 8042 0 201 320 105 76 chr5 93351292 93351711 -106278439 + L3 LINE CR1 73 503 -1074 183 80 0 0 chr5 93352093 93352118 -106278032 + (TG)n Simple_repeat Simple_repeat 2 26 0 348 266 11 32 chr5 93352182 93352276 -106277874 - L2 LINE L2 -30 3283 3192 277 311 97 17 chr5 93352277 93352515 -106277635 - L1ME4a LINE L1 -218 5903 5647 365 340 67 5 chr5 93352678 93352872 -106277278 - L1ME4a LINE L1 -692 5472 5267 341 359 81 28 chr5 93352893 93352949 -106277201 + L3 LINE CR1 793 845 -732 198 0 0 0 chr5 93352949 93352971 -106277179 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 261 0 0 0 chr5 93352970 93352999 -106277151 + (CA)n Simple_repeat Simple_repeat 1 29 0 341 359 81 28 chr5 93352971 93353338 -106276812 + L3 LINE CR1 845 1209 -368 276 297 135 9 chr5 93353516 93353627 -106276523 + L3 LINE CR1 1318 1442 -135 23 0 0 0 chr5 93354108 93354131 -106276019 + AT_rich Low_complexity Low_complexity 1 23 0 840 287 172 18 chr5 93355132 93355515 -106274635 - L2 LINE L2 -43 3270 2829 296 263 151 78 chr5 93356406 93356585 -106273565 + MIR3 SINE MIR 8 199 -9 1459 203 27 27 chr5 93356923 93357219 -106272931 + MLT1A2 LTR MaLR 68 363 -11 301 24 0 0 chr5 93357369 93357411 -106272739 + L1PA8 LINE L1 6129 6170 -2 22 70 0 0 chr5 93358279 93358322 -106271828 + AT_rich Low_complexity Low_complexity 1 43 0 239 286 0 0 chr5 93358873 93358929 -106271221 + (TA)n Simple_repeat Simple_repeat 2 57 0 629 343 68 0 chr5 93359130 93359349 -106270801 + MIR SINE MIR 20 253 -9 660 341 26 70 chr5 93359671 93359826 -106270324 - L2 LINE L2 -10 3262 3102 1594 316 79 24 chr5 93359826 93360482 -106269668 - MER115 DNA AcHobo 0 693 2 660 341 26 70 chr5 93360482 93360783 -106269367 - L2 LINE L2 -170 3102 2826 1621 154 16 53 chr5 93366116 93366259 -106263891 + AluSx SINE Alu 1 148 -164 297 0 0 0 chr5 93366259 93366292 -106263858 + (TG)n Simple_repeat Simple_repeat 1 33 0 1621 154 16 53 chr5 93366292 93366466 -106263684 + AluSx SINE Alu 148 306 -6 6117 168 32 12 chr5 93367125 93368729 -106261421 - L1MC1 LINE L1 0 6333 4705 669 262 126 44 chr5 93370990 93371418 -106258732 + MLT2C2 LTR ERVL 2 464 0 233 150 67 17 chr5 93371422 93371482 -106258668 + MLT1J2 LTR MaLR 66 128 -322 23 33 0 0 chr5 93372656 93372686 -106257464 + AT_rich Low_complexity Low_complexity 1 30 0 192 111 0 0 chr5 93374479 93374515 -106255635 + (TAAAAA)n Simple_repeat Simple_repeat 6 41 0 21 36 0 0 chr5 93375808 93375836 -106254314 + AT_rich Low_complexity Low_complexity 1 28 0 716 308 14 4 chr5 93375902 93376130 -106254020 + MIR SINE MIR 34 262 0 476 263 158 0 chr5 93377244 93377396 -106252754 + MIR SINE MIR 86 261 -1 586 244 99 89 chr5 93377595 93377988 -106252162 - L2 LINE L2 -624 2690 2294 258 176 0 0 chr5 93378970 93379021 -106251129 + GA-rich Low_complexity Low_complexity 3 53 0 228 238 0 0 chr5 93379597 93379660 -106250490 + L1MA5 LINE L1 6238 6300 0 913 315 114 16 chr5 93382249 93382880 -106247270 + L2 LINE L2 2630 3313 0 341 329 115 16 chr5 93383082 93383334 -106246816 + L3b LINE CR1 1161 1437 -146 338 293 185 31 chr5 93383835 93384057 -106246093 - MIR SINE MIR 0 262 7 393 288 57 31 chr5 93384484 93384713 -106245437 + L1ME4a LINE L1 5561 5795 -326 320 261 142 0 chr5 93384742 93384960 -106245190 + L1ME4a LINE L1 5869 6117 -4 393 330 66 61 chr5 93385372 93385781 -106244369 + L1M4 LINE L1 4823 5233 -913 303 263 64 12 chr5 93385820 93385991 -106244159 + L1P5 LINE L1 5283 5462 -689 180 77 0 0 chr5 93386248 93386274 -106243876 + (CA)n Simple_repeat Simple_repeat 2 27 0 279 0 0 0 chr5 93386568 93386599 -106243551 + (TG)n Simple_repeat Simple_repeat 1 31 0 * 417 20 0 0 chr5 93386598 93386648 -106243502 + (GA)n Simple_repeat Simple_repeat 1 50 0 2053 133 133 13 chr5 93386978 93387360 -106242790 - MSTA LTR MaLR 0 428 1 415 242 17 62 chr5 93387965 93388058 -106242092 - MER117 DNA MER1_type -24 173 90 2261 120 0 0 chr5 93388058 93388358 -106241792 - AluSx SINE Alu -12 300 1 415 242 17 62 chr5 93388358 93388442 -106241708 - MER117 DNA MER1_type -107 90 4 269 250 80 23 chr5 93390284 93390372 -106239778 + MIR SINE MIR 170 262 0 4793 205 75 16 chr5 93390818 93392175 -106237975 + Charlie1 DNA MER1_type 4 2747 -14 2487 73 3 0 chr5 93392177 93392478 -106237672 - AluY SINE Alu -9 302 1 308 309 79 40 chr5 93393563 93393715 -106236435 + MIR3 SINE MIR 10 167 -41 2387 50 40 7 chr5 93394181 93394482 -106235668 - AluY SINE Alu 0 311 1 1660 108 7 35 chr5 93395444 93395587 -106234563 - L1MA9 LINE L1 -9 6303 6170 225 0 0 0 chr5 93395587 93395612 -106234538 + (TG)n Simple_repeat Simple_repeat 2 26 0 1660 108 7 35 chr5 93395612 93395756 -106234394 - L1MA9 LINE L1 -142 6170 6024 21 0 0 0 chr5 93395799 93395820 -106234330 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 93396241 93396265 -106233885 + (T)n Simple_repeat Simple_repeat 1 24 0 1700 323 66 56 chr5 93398309 93400203 -106229947 - HERV16 LTR ERVL -20 5350 3237 1629 316 21 5 chr5 93400400 93401000 -106229150 - HERV16 LTR ERVL -1900 3096 2656 1302 324 92 11 chr5 93401113 93401776 -106228374 - HERV16 LTR ERVL -3266 2498 1782 268 349 55 37 chr5 93401875 93402093 -106228057 - HERV16 LTR ERVL -3429 1567 1346 * 686 269 65 5 chr5 93402091 93402277 -106227873 - HERV16 LTR ERVL -3928 1068 872 376 275 11 0 chr5 93402800 93402813 -106227337 + L2 LINE L2 3222 3233 -80 210 118 0 0 chr5 93402813 93402847 -106227303 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 376 275 11 0 chr5 93402847 93402924 -106227226 + L2 LINE L2 3233 3313 0 2801 175 16 16 chr5 93403092 93403607 -106226543 + MLT2B2 LTR ERVL 1 515 0 277 242 0 22 chr5 93407008 93407099 -106223051 + L1MC4 LINE L1 6615 6703 -1339 180 0 0 0 chr5 93407101 93407121 -106223029 + (CA)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr5 93407186 93407209 -106222941 + AT_rich Low_complexity Low_complexity 1 23 0 11673 143 42 19 chr5 93407985 93410748 -106219402 + L1PB1 LINE L1 951 3777 -3085 7205 180 11 31 chr5 93410860 93413087 -106217063 + L1PB1 LINE L1 4331 6507 -360 303 93 0 0 chr5 93413087 93413130 -106217020 + (TA)n Simple_repeat Simple_repeat 1 43 0 288 0 0 0 chr5 93413133 93413165 -106216985 + (CA)n Simple_repeat Simple_repeat 2 33 0 2148 132 8 11 chr5 93413165 93413522 -106216628 + L1PB1 LINE L1 6507 6862 -5 2155 84 10 14 chr5 93413593 93413889 -106216261 + AluSc SINE Alu 1 295 -14 385 308 49 100 chr5 93415683 93416215 -106213935 + L1M4 LINE L1 2302 2806 -3340 264 247 79 0 chr5 93416345 93416434 -106213716 + L1ME LINE L1 5771 5866 -255 1209 303 82 19 chr5 93417316 93417781 -106212369 + Charlie2b DNA MER1_type 170 663 -2119 1776 254 86 13 chr5 93417854 93418479 -106211671 + Charlie2a DNA MER1_type 1485 2155 -707 1748 157 11 4 chr5 93418482 93418762 -106211388 + AluSx SINE Alu 5 286 -26 326 238 41 17 chr5 93418773 93418945 -106211205 + (TA)n Simple_repeat Simple_repeat 2 177 0 332 253 22 33 chr5 93418945 93419036 -106211114 - L1MC4 LINE L1 -1339 6703 6614 4221 60 16 2 chr5 93419093 93419641 -106210509 + L1PA7 LINE L1 5586 6141 -13 1292 213 84 30 chr5 93419664 93420162 -106209988 + Charlie2a DNA MER1_type 2285 2809 -53 1899 121 17 13 chr5 93420729 93421062 -106209088 - AluSq SINE Alu 0 313 1 571 252 70 58 chr5 93421180 93421422 -106208728 - L1ME3 LINE L1 -31 6131 5887 485 237 53 12 chr5 93421427 93421596 -106208554 + L1M4 LINE L1 5195 5370 -776 24 32 0 0 chr5 93421867 93421898 -106208252 + AT_rich Low_complexity Low_complexity 1 31 0 248 167 0 19 chr5 93422143 93422197 -106207953 + CT-rich Low_complexity Low_complexity 4 56 0 226 343 120 0 chr5 93422345 93422453 -106207697 - L2 LINE L2 -1 3271 3151 42168 38 25 2 chr5 93422453 93428462 -106201688 + L1PA5 LINE L1 2 6154 0 1057 147 0 0 chr5 93428802 93428958 -106201192 - AluSg/x SINE Alu -21 291 136 272 312 93 68 chr5 93429089 93429541 -106200609 + L2 LINE L2 2620 3080 -192 1052 309 61 20 chr5 93429543 93430242 -106199908 - L2 LINE L2 -2 3311 2587 320 342 72 0 chr5 93430318 93430429 -106199721 + L2 LINE L2 3154 3272 0 22585 35 1 0 chr5 93430507 93434033 -106196117 + L1PA2 LINE L1 2630 6153 -2 291 196 63 0 chr5 93434037 93434133 -106196017 - L1ME3 LINE L1 -383 5779 5678 7442 23 0 2 chr5 93436487 93437599 -106192551 + L1HS LINE L1 5010 6118 -37 22 0 0 0 chr5 93438089 93438111 -106192039 + AT_rich Low_complexity Low_complexity 1 22 0 258 313 16 8 chr5 93438161 93438289 -106191861 + L1ME3A LINE L1 3546 3674 -2472 228 211 14 14 chr5 93438310 93438381 -106191769 + L1ME3A LINE L1 4633 4703 -1443 268 297 88 22 chr5 93438420 93438602 -106191548 + L1ME3A LINE L1 4801 4994 -1152 334 274 124 21 chr5 93438603 93438837 -106191313 + L1ME3A LINE L1 4947 5204 -942 450 293 43 40 chr5 93439235 93439539 -106190611 + L1ME3A LINE L1 5623 5940 -230 21 0 0 0 chr5 93439573 93439594 -106190556 + AT_rich Low_complexity Low_complexity 1 21 0 29 28 0 0 chr5 93439863 93439899 -106190251 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr5 93440212 93440242 -106189908 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 93440746 93440769 -106189381 + AT_rich Low_complexity Low_complexity 1 23 0 229 393 39 8 chr5 93441120 93441295 -106188855 + MIR SINE MIR 17 208 -54 338 321 143 0 chr5 93441369 93441509 -106188641 + MIR SINE MIR 47 206 -56 22 35 0 0 chr5 93441645 93441674 -106188476 + AT_rich Low_complexity Low_complexity 1 29 0 852 331 35 39 chr5 93442092 93442628 -106187522 - L2 LINE L2 -34 3279 2750 231 61 0 0 chr5 93444896 93444929 -106185221 + (T)n Simple_repeat Simple_repeat 1 33 0 222 37 0 0 chr5 93445548 93445575 -106184575 + (CA)n Simple_repeat Simple_repeat 2 28 0 279 0 0 0 chr5 93446418 93446449 -106183701 + (T)n Simple_repeat Simple_repeat 1 31 0 339 260 59 77 chr5 93447141 93447310 -106182840 + MER69A DNA AcHobo 9 174 -3 422 295 29 0 chr5 93447741 93447846 -106182304 - MIR SINE MIR -81 181 74 514 278 72 25 chr5 93447918 93448195 -106181955 + L1ME4a LINE L1 5539 5828 -293 24 77 0 0 chr5 93448205 93448257 -106181893 + AT_rich Low_complexity Low_complexity 1 52 0 2057 128 3 3 chr5 93448557 93448855 -106181295 + AluSx SINE Alu 1 298 -14 351 0 0 0 chr5 93449497 93449536 -106180614 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 186 43 0 0 chr5 93449543 93449566 -106180584 + (GA)n Simple_repeat Simple_repeat 1 23 0 24 32 0 0 chr5 93450427 93450458 -106179692 + AT_rich Low_complexity Low_complexity 1 31 0 700 293 24 12 chr5 93451026 93451275 -106178875 + L1ME LINE L1 5384 5635 -527 236 282 165 0 chr5 93451288 93451373 -106178777 + MLT1I LTR MaLR 27 125 -284 368 269 14 38 chr5 93451486 93451674 -106178476 + MLT1I LTR MaLR 272 409 0 412 281 41 25 chr5 93451914 93452035 -106178115 + L2 LINE L2 3191 3313 0 375 310 39 0 chr5 93452260 93452389 -106177761 + MIR SINE MIR 121 254 -8 219 69 0 0 chr5 93452395 93452424 -106177726 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4667 96 7 9 chr5 93452945 93453632 -106176518 + L1PB2 LINE L1 5463 6148 -3 21 36 0 0 chr5 93454638 93454666 -106175484 + AT_rich Low_complexity Low_complexity 1 28 0 7225 169 16 15 chr5 93455524 93457884 -106172266 + L1PB2 LINE L1 3769 6146 -5 21 0 0 0 chr5 93457886 93457907 -106172243 + AT_rich Low_complexity Low_complexity 1 21 0 184 203 228 13 chr5 93458820 93458899 -106171251 - MIR SINE MIR -81 127 32 3538 186 18 18 chr5 93458939 93459659 -106170491 + L1MB7 LINE L1 5447 6166 -18 30080 118 9 61 chr5 93459736 93466227 -106163923 + L1PA7 LINE L1 12 6154 0 1062 244 67 61 chr5 93466229 93466785 -106163365 - MLT1G1 LTR MaLR -52 543 1 194 136 23 0 chr5 93467349 93467393 -106162757 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 481 302 127 29 chr5 93467502 93467879 -106162271 - MLT1J2 LTR MaLR 0 450 37 42534 51 7 0 chr5 93468123 93474222 -106155928 - L1PA4 LINE L1 0 6155 18 330 294 210 5 chr5 93474872 93475086 -106155064 - MIR SINE MIR 0 262 5 1888 134 24 3 chr5 93475116 93475408 -106154742 + AluSx SINE Alu 1 298 -14 237 33 0 0 chr5 93475584 93475614 -106154536 + (TC)n Simple_repeat Simple_repeat 1 30 0 192 40 0 0 chr5 93475613 93475638 -106154512 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 1418 264 68 46 chr5 93478669 93479222 -106150928 + MER77 LTR ERV1 1 601 -4 32 43 0 0 chr5 93480210 93480256 -106149894 + AT_rich Low_complexity Low_complexity 1 46 0 471 371 9 14 chr5 93480973 93481194 -106148956 + MIR SINE MIR 36 255 -7 1891 171 0 7 chr5 93481394 93481699 -106148451 + AluJo SINE Alu 1 303 -9 231 93 19 37 chr5 93481899 93481953 -106148197 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 1997 159 24 39 chr5 93482005 93482392 -106147758 + MLT1B LTR MaLR 1 396 0 704 268 46 54 chr5 93482423 93482684 -106147466 + MIR SINE MIR 1 259 -3 889 245 78 25 chr5 93483038 93483283 -106146867 - MIR SINE MIR -2 260 3 2220 94 7 0 chr5 93483689 93483975 -106146175 + AluY SINE Alu 1 288 -23 2796 138 66 23 chr5 93484438 93484954 -106145196 + LTR64 LTR ERVK 1 538 -20 202 244 0 0 chr5 93485127 93485172 -106144978 + A-rich Low_complexity Low_complexity 1 45 0 206 81 27 0 chr5 93485505 93485542 -106144608 + (TTTTTG)n Simple_repeat Simple_repeat 2 39 0 747 141 178 181 chr5 93485962 93486266 -106143884 + AluSp SINE Alu 1 303 0 816 308 13 4 chr5 93486517 93486751 -106143399 + MIR SINE MIR 21 256 -6 2593 63 0 0 chr5 93487035 93487369 -106142781 - L1PA5 LINE L1 -1169 4977 4644 7269 51 0 1 chr5 93487369 93488519 -106141631 + L1PA5 LINE L1 5006 6154 0 1075 147 0 0 chr5 93488859 93489015 -106141135 - AluSg/x SINE Alu -21 291 136 287 312 93 68 chr5 93489146 93489598 -106140552 + L2 LINE L2 2620 3080 -192 1107 314 58 16 chr5 93489600 93490297 -106139853 - L2 LINE L2 -2 3311 2587 311 342 72 0 chr5 93490373 93490484 -106139666 + L2 LINE L2 3154 3272 0 22659 34 0 0 chr5 93490562 93494088 -106136062 + L1PA3 LINE L1 2630 6152 -3 21 0 0 0 chr5 93494088 93494109 -106136041 + AT_rich Low_complexity Low_complexity 1 21 0 1747 214 37 45 chr5 93494509 93495018 -106135132 - MLT1D LTR MaLR 0 505 1 183 129 0 0 chr5 93495323 93495354 -106134796 + (CA)n Simple_repeat Simple_repeat 2 32 0 345 297 214 19 chr5 93495457 93495780 -106134370 + L1ME4a LINE L1 5481 5866 -255 1199 303 82 19 chr5 93496662 93497127 -106133023 + Charlie2b DNA MER1_type 170 663 -2119 1759 248 96 0 chr5 93497200 93497761 -106132389 + Charlie2a DNA MER1_type 1485 2099 -763 1664 177 7 4 chr5 93497828 93498129 -106132021 + AluSx SINE Alu 5 306 0 321 235 40 13 chr5 93498149 93498298 -106131852 + (TA)n Simple_repeat Simple_repeat 2 154 0 331 253 22 33 chr5 93498298 93498389 -106131761 - L1MC4 LINE L1 -1339 6703 6614 4246 62 16 0 chr5 93498448 93498995 -106131155 + L1PA7 LINE L1 5586 6141 -13 1227 215 84 30 chr5 93499018 93499516 -106130634 + Charlie2a DNA MER1_type 2285 2809 -53 1932 121 17 13 chr5 93500083 93500416 -106129734 - AluSq SINE Alu 0 313 1 555 252 70 58 chr5 93500534 93500776 -106129374 - L1ME3 LINE L1 -31 6131 5887 475 237 53 12 chr5 93500781 93500950 -106129200 + L1M4 LINE L1 5195 5370 -776 24 32 0 0 chr5 93501221 93501252 -106128898 + AT_rich Low_complexity Low_complexity 1 31 0 248 167 0 19 chr5 93501497 93501551 -106128599 + CT-rich Low_complexity Low_complexity 4 56 0 222 343 120 0 chr5 93501699 93501807 -106128343 - L2 LINE L2 -1 3271 3151 25031 29 18 1 chr5 93501807 93507815 -106122335 + L1PA2 LINE L1 2 6153 -2 267 196 63 0 chr5 93507819 93507915 -106122235 - L1ME3 LINE L1 -383 5779 5678 442 273 93 29 chr5 93508973 93509145 -106121005 + MER5A DNA MER1_type 7 189 0 1560 207 138 35 chr5 93509791 93510246 -106119904 - MLT1D LTR MaLR -3 502 1 531 286 148 65 chr5 93510675 93511182 -106118968 + MLT1H LTR MaLR 1 549 0 451 260 79 11 chr5 93511488 93511821 -106118329 + L1ME4a LINE L1 5728 6120 -1 15821 166 30 19 chr5 93512115 93512319 -106117831 + L1MA5A LINE L1 1 201 -6812 2384 78 7 0 chr5 93512319 93512613 -106117537 + AluY SINE Alu 1 296 -15 15821 166 30 19 chr5 93512613 93514245 -106115905 + L1MA5A LINE L1 201 1813 -5200 2860 10 0 0 chr5 93514245 93514555 -106115595 - AluYb8 SINE Alu -8 310 1 15821 166 30 19 chr5 93514555 93517775 -106112375 + L1MA5A LINE L1 1813 5185 -1828 180 0 0 0 chr5 93517775 93517795 -106112355 + (CAA)n Simple_repeat Simple_repeat 2 21 0 15821 166 30 19 chr5 93517795 93519281 -106110869 + L1MA5A LINE L1 5185 6653 -360 2049 110 7 3 chr5 93519178 93519487 -106110663 + L1PB1 LINE L1 6551 6860 -7 * 23 54 0 0 chr5 93519548 93519585 -106110565 + AT_rich Low_complexity Low_complexity 1 37 0 637 256 79 7 chr5 93519590 93519969 -106110181 + L1MC4 LINE L1 6285 6613 -1195 * 1254 229 48 45 chr5 93519967 93520429 -106109721 + L1MC4a LINE L1 7346 7808 0 219 167 0 24 chr5 93521040 93521082 -106109068 + T-rich Low_complexity Low_complexity 5 45 0 355 149 103 0 chr5 93521083 93521170 -106108980 - L1MB2 LINE L1 -1 6170 6075 231 328 45 0 chr5 93522434 93522501 -106107649 + L2 LINE L2 3153 3222 -50 183 200 0 25 chr5 93522817 93522857 -106107293 - L3 LINE CR1 -113 1464 1426 449 345 114 30 chr5 93522907 93523336 -106106814 - L2 LINE L2 -1 3312 2848 232 189 27 0 chr5 93524679 93524753 -106105397 + (TA)n Simple_repeat Simple_repeat 1 76 0 1461 140 18 110 chr5 93525820 93525951 -106104199 + AluJo SINE Alu 4 145 -167 2128 111 40 0 chr5 93525951 93526249 -106103901 + AluSx SINE Alu 1 310 -2 1461 140 18 110 chr5 93526249 93526261 -106103889 + AluJo SINE Alu 145 157 -155 2313 72 0 56 chr5 93526261 93526582 -106103568 + AluY SINE Alu 1 303 -8 1461 140 18 110 chr5 93526582 93526765 -106103385 + AluJo SINE Alu 157 301 -11 25 51 0 0 chr5 93527296 93527335 -106102815 + AT_rich Low_complexity Low_complexity 1 39 0 258 149 0 0 chr5 93529224 93529271 -106100879 - MADE1 DNA Mariner -33 47 1 2621 23 0 7 chr5 93530249 93530551 -106099599 + AluY SINE Alu 1 300 -11 6121 109 15 138 chr5 93531667 93532548 -106097602 - L1P LINE L1 -1649 4497 3509 642 60 0 0 chr5 93532548 93532632 -106097518 - L1PA5 LINE L1 0 6154 6071 6121 109 15 138 chr5 93532632 93532737 -106097413 - L1P LINE L1 -2637 3509 3393 1222 76 19 0 chr5 93532737 93532894 -106097256 - AluY SINE Alu -5 306 147 6121 109 15 138 chr5 93532894 93533156 -106096994 - L1P LINE L1 -2753 3393 3265 598 173 0 0 chr5 93533156 93533260 -106096890 + L1PA8A LINE L1 4502 4605 -1541 6060 83 23 6 chr5 93533264 93534656 -106095494 + L1PA8A LINE L1 4710 6124 -7 462 277 183 23 chr5 93534677 93534977 -106095173 + HAL1 LINE L1 1974 2321 -186 356 227 253 32 chr5 93535666 93535820 -106094330 + MER5A DNA MER1_type 1 188 -1 412 282 36 0 chr5 93535832 93535942 -106094208 + MIR SINE MIR 76 189 -73 31 58 0 0 chr5 93535971 93536023 -106094127 + AT_rich Low_complexity Low_complexity 1 52 0 709 257 6 11 chr5 93537155 93537334 -106092816 - MER5B DNA MER1_type 0 178 1 202 240 20 0 chr5 93537447 93537497 -106092653 + L2 LINE L2 3009 3059 -213 1037 247 0 36 chr5 93537754 93538005 -106092145 + MIR SINE MIR 21 262 0 1951 94 59 17 chr5 93540216 93540504 -106089646 - AluSg SINE Alu -10 300 1 511 165 18 0 chr5 93541780 93541889 -106088261 + CT-rich Low_complexity Low_complexity 3 113 0 207 69 0 0 chr5 93542259 93542288 -106087862 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1966 120 0 55 chr5 93542668 93542976 -106087174 - AluSq SINE Alu -20 293 3 251 328 105 12 chr5 93543150 93543321 -106086829 + L2 LINE L2 2583 2769 -545 5118 123 13 10 chr5 93543425 93544203 -106085947 - LTR17 LTR ERV1 0 780 1 1858 81 0 133 chr5 93545137 93545484 -106084666 + AluSg SINE Alu 10 310 0 219 343 78 0 chr5 93547428 93547530 -106082620 + L2 LINE L2 3151 3260 -12 11417 180 28 12 chr5 93547607 93549796 -106080354 + L1M1 LINE L1 13 2236 -5329 2636 26 0 3 chr5 93550207 93550509 -106079641 + AluY SINE Alu 1 301 -10 6097 109 15 139 chr5 93551625 93552506 -106077644 - L1P LINE L1 -1649 4497 3509 642 60 0 0 chr5 93552506 93552590 -106077560 - L1PA5 LINE L1 0 6154 6071 6097 109 15 139 chr5 93552590 93552695 -106077455 - L1P LINE L1 -2637 3509 3393 1207 82 19 0 chr5 93552695 93552853 -106077297 - AluY SINE Alu -4 307 147 6097 109 15 139 chr5 93552853 93553115 -106077035 - L1P LINE L1 -2753 3393 3265 598 173 0 0 chr5 93553115 93553219 -106076931 + L1PA8A LINE L1 4502 4605 -1541 4159 109 21 2 chr5 93553223 93554137 -106076013 + L1PA8A LINE L1 4710 5637 -494 4930 102 14 1 chr5 93554137 93554849 -106075301 + L1PA10 LINE L1 5444 6164 -4 21 36 0 0 chr5 93555326 93555354 -106074796 + AT_rich Low_complexity Low_complexity 1 28 0 233 29 0 29 chr5 93556105 93556140 -106074010 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 751 325 30 4 chr5 93556994 93557228 -106072922 - MIR SINE MIR -14 248 9 4333 191 21 6 chr5 93557904 93559816 -106070334 + L1PA16 LINE L1 4182 6157 -9 229 402 105 20 chr5 93561478 93561821 -106068329 - L2 LINE L2 -9 3263 2892 743 345 136 17 chr5 93562133 93562788 -106067362 - L2 LINE L2 -805 2509 1777 562 174 9 0 chr5 93562811 93562920 -106067230 + MLT1C LTR MaLR 8 117 -350 * 1268 169 51 18 chr5 93562916 93563189 -106066961 - MLT1C LTR MaLR -185 282 1 39 22 0 0 chr5 93563221 93563267 -106066883 + AT_rich Low_complexity Low_complexity 1 46 0 413 273 15 38 chr5 93563276 93563408 -106066742 - MIR3 SINE MIR -76 132 4 * 442 350 95 48 chr5 93563408 93563910 -106066240 + L2 LINE L2 2734 3266 -6 764 277 89 42 chr5 93564006 93564367 -106065783 + L2 LINE L2 2936 3313 0 2174 119 7 0 chr5 93566029 93566332 -106063818 + AluSx SINE Alu 1 305 -7 350 323 131 45 chr5 93566637 93566835 -106063315 + L2 LINE L2 2566 2780 -534 2228 116 0 7 chr5 93567028 93567331 -106062819 + AluSg SINE Alu 1 301 -9 22 56 0 0 chr5 93567411 93567447 -106062703 + AT_rich Low_complexity Low_complexity 1 36 0 200 188 0 0 chr5 93568038 93568070 -106062080 + polypurine Low_complexity Low_complexity 1 32 0 270 233 42 17 chr5 93569652 93569772 -106060378 + (TA)n Simple_repeat Simple_repeat 1 123 0 249 314 137 34 chr5 93570169 93570344 -106059806 - MIR SINE MIR -36 226 34 261 75 0 25 chr5 93570498 93570538 -106059612 + U6 snRNA snRNA 1 39 -68 350 262 272 5 chr5 93573039 93573241 -106056909 + MIR SINE MIR 1 256 -6 2218 105 0 0 chr5 93573445 93573731 -106056419 - AluSc SINE Alu -23 286 1 287 303 9 9 chr5 93573731 93573840 -106056310 + MIR SINE MIR 148 256 -6 420 329 68 38 chr5 93574110 93574347 -106055803 - MIR SINE MIR -17 245 2 263 228 0 0 chr5 93577241 93577298 -106052852 - L2 LINE L2 -1 3312 3256 414 259 0 0 chr5 93577359 93577444 -106052706 + FRAM/FAM SINE Alu 1 85 -91 191 362 158 20 chr5 93577560 93577806 -106052344 - L2 LINE L2 -671 2643 2364 194 234 128 89 chr5 93578035 93578270 -106051880 - L2 LINE L2 -1220 2094 1851 203 293 61 24 chr5 93578915 93578997 -106051153 + L2 LINE L2 3188 3272 0 22 35 0 0 chr5 93579211 93579240 -106050910 + AT_rich Low_complexity Low_complexity 1 29 0 490 252 211 23 chr5 93581293 93581511 -106048639 - MIR SINE MIR 0 262 4 271 292 21 0 chr5 93581631 93581727 -106048423 + CT-rich Low_complexity Low_complexity 2 99 0 1901 156 3 47 chr5 93581731 93582052 -106048098 - AluJb SINE Alu 0 312 6 944 202 56 146 chr5 93582318 93582729 -106047421 + MLT1A2 LTR MaLR 1 374 0 1479 129 64 131 chr5 93584135 93584508 -106045642 - MER7A DNA MER2_type 0 346 1 6265 175 78 20 chr5 93584508 93585822 -106044328 - MER52A LTR ERV1 0 1755 365 946 172 0 73 chr5 93585820 93586052 -106044098 - MER52A LTR ERV1 -1540 215 1 * 2664 66 9 0 chr5 93586231 93586579 -106043571 - L1PA7 LINE L1 0 6154 5804 204 260 26 39 chr5 93587488 93587565 -106042585 - MIR SINE MIR -51 211 136 209 159 16 0 chr5 93587889 93587952 -106042198 + T-rich Low_complexity Low_complexity 2 65 0 514 16 0 0 chr5 93588222 93588285 -106041865 - HERVL-A2 LTR ERVL -5591 63 1 3276 78 39 0 chr5 93588285 93588721 -106041429 - MLT2A2 LTR ERVL 0 453 1 349 271 0 0 chr5 93589611 93589681 -106040469 + L2 LINE L2 3203 3272 0 209 235 221 0 chr5 93590344 93590412 -106039738 + MIR3 SINE MIR 125 207 -1 522 319 44 62 chr5 93590899 93591172 -106038978 - L2 LINE L2 -8 3264 2997 491 266 21 36 chr5 93591271 93591463 -106038687 + MER5A DNA MER1_type 1 189 0 230 73 24 0 chr5 93592481 93592522 -106037628 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 373 268 76 50 chr5 93592545 93592743 -106037407 + MIR SINE MIR 24 226 -36 262 283 174 87 chr5 93593346 93593483 -106036667 + MIR SINE MIR 1 125 -137 1943 144 24 42 chr5 93593483 93593865 -106036285 + THE1C LTR MaLR 1 375 0 262 283 174 87 chr5 93593865 93593957 -106036193 + MIR SINE MIR 125 250 -12 393 154 0 2 chr5 93594033 93594109 -106036041 - MLT1A1 LTR MaLR -228 137 71 1092 197 20 47 chr5 93594178 93594414 -106035736 + MLT1A1 LTR MaLR 74 302 -63 2008 98 0 4 chr5 93594414 93594690 -106035460 + AluY SINE Alu 21 295 -16 1092 197 20 47 chr5 93594690 93594753 -106035397 + MLT1A1 LTR MaLR 302 365 0 253 90 104 45 chr5 93595188 93595255 -106034895 + (TTTAA)n Simple_repeat Simple_repeat 3 73 0 39648 60 5 0 chr5 93595294 93601408 -106028742 + L1PA5 LINE L1 11 6154 0 241 388 19 0 chr5 93601420 93601523 -106028627 - MIR SINE MIR -111 151 47 573 335 6 11 chr5 93601950 93602129 -106028021 + MER5B DNA MER1_type 1 178 0 302 266 16 0 chr5 93603223 93603287 -106026863 - L2 LINE L2 -7 3265 3201 25928 28 14 1 chr5 93603489 93609526 -106020624 + L1HS LINE L1 1 6155 0 240 35 0 0 chr5 93609539 93609568 -106020582 + (A)n Simple_repeat Simple_repeat 1 29 0 209 300 178 0 chr5 93610395 93610485 -106019665 + MIR SINE MIR 45 150 -112 849 261 110 85 chr5 93610496 93611210 -106018940 + L2 LINE L2 2554 3292 -21 1003 271 113 36 chr5 93611634 93612139 -106018011 + MLT1H1 LTR MaLR 1 544 -11 364 200 0 0 chr5 93612428 93612493 -106017657 + MER58 DNA MER1_type 2356 2420 0 822 258 47 0 chr5 93612833 93613046 -106017104 - MER58A DNA MER1_type 0 224 2 23 68 0 0 chr5 93614836 93614880 -106015270 + AT_rich Low_complexity Low_complexity 1 44 0 787 283 112 27 chr5 93618833 93619208 -106010942 + MLT1I LTR MaLR 1 407 -2 325 224 178 2 chr5 93619488 93619625 -106010525 - MIR SINE MIR -30 178 17 351 0 0 0 chr5 93619965 93620004 -106010146 + (TG)n Simple_repeat Simple_repeat 1 39 0 342 45 0 0 chr5 93621975 93622019 -106008131 + (CA)n Simple_repeat Simple_repeat 1 44 0 772 219 146 5 chr5 93622144 93622336 -106007814 + MER20B DNA MER1_type 1 219 0 1521 162 65 14 chr5 93622380 93622658 -106007492 + AluJb SINE Alu 1 292 -20 450 293 49 53 chr5 93623323 93623548 -106006602 - LTR16B LTR ERVL -236 228 5 181 204 41 41 chr5 93624194 93624243 -106005907 + L3 LINE CR1 1524 1572 -5 486 239 0 2 chr5 93625703 93625814 -106004336 + MLT1J LTR MaLR 51 196 -291 199 279 73 15 chr5 93626728 93626796 -106003354 - L2 LINE L2 0 3272 3201 201 367 132 9 chr5 93626852 93627179 -106002971 + L2 LINE L2 1992 2358 -956 498 314 64 24 chr5 93628043 93628465 -106001685 - LTR67 LTR ERVL -93 464 2 789 296 88 43 chr5 93629383 93630360 -105999790 + HAL1 LINE L1 764 1784 -723 14391 123 41 17 chr5 93630530 93631425 -105998725 + L1PA2 LINE L1 2907 3778 -2377 2294 82 0 36 chr5 93631425 93631730 -105998420 + AluY SINE Alu 1 294 -17 14391 123 41 17 chr5 93631730 93633849 -105996301 + L1PA2 LINE L1 3778 6006 -149 1378 243 94 16 chr5 93683849 93684285 -105945865 + MER20B DNA MER1_type 281 750 -33 2480 80 0 0 chr5 93684293 93684604 -105945546 + AluY SINE Alu 1 311 0 426 299 39 0 chr5 93686951 93687105 -105943045 + MIR SINE MIR 82 241 -21 425 265 15 8 chr5 93687976 93688108 -105942042 + L1PB4 LINE L1 5949 6081 -75 189 333 0 18 chr5 93688812 93688869 -105941281 - L2 LINE L2 -16 3256 3201 182 358 58 0 chr5 93689137 93689257 -105940893 + L2 LINE L2 2919 3045 -227 430 282 36 28 chr5 93690013 93690197 -105939953 + MIR SINE MIR 7 194 -63 341 207 11 23 chr5 93690275 93690362 -105939788 - AluSq SINE Alu -111 192 107 365 232 33 13 chr5 93690510 93690661 -105939489 + (TA)n Simple_repeat Simple_repeat 1 154 0 239 0 32 0 chr5 93690664 93690695 -105939455 + (TAGA)n Simple_repeat Simple_repeat 1 32 0 2571 202 24 24 chr5 93690708 93691238 -105938912 - MLT2B3 LTR ERVL -36 514 1 904 203 0 0 chr5 93691239 93691397 -105938753 + FRAM SINE Alu 1 158 -18 2332 61 40 0 chr5 93691399 93691695 -105938455 + AluY SINE Alu 1 308 -3 369 279 77 101 chr5 93692010 93692681 -105937469 - L1M4 LINE L1 -1821 4325 3670 2138 93 13 7 chr5 93692681 93692981 -105937169 + AluSq SINE Alu 1 302 -11 369 279 77 101 chr5 93692981 93693023 -105937127 - L1M4 LINE L1 -2476 3670 3629 2504 163 54 4 chr5 93694913 93695379 -105934771 + L1MB5 LINE L1 5572 6060 -114 592 151 0 21 chr5 93695379 93695472 -105934678 + AluJ/FLAM SINE Alu 1 91 -221 240 264 0 0 chr5 93695507 93695560 -105934590 - MER113 DNA MER1_type? -9 512 460 1670 174 13 17 chr5 93695686 93695985 -105934165 + AluJo SINE Alu 1 298 -14 548 142 26 18 chr5 93696001 93696114 -105934036 + L1MB3 LINE L1 6070 6183 0 845 255 65 53 chr5 93696576 93696839 -105933311 + L1MC/D LINE L1 5471 5736 -2072 * 3073 173 13 3 chr5 93696817 93697447 -105932703 + L1P4 LINE L1 4728 5363 -783 5782 111 24 9 chr5 93697452 93698476 -105931674 + L1PB2 LINE L1 5100 6137 -14 898 93 0 0 chr5 93698493 93698622 -105931528 + L1P4 LINE L1 5355 5483 -682 716 165 0 15 chr5 93698622 93698755 -105931395 + FLAM_C SINE Alu 1 131 -12 812 246 44 5 chr5 93700566 93700769 -105929381 + MIR SINE MIR 52 262 0 30 0 0 0 chr5 93701011 93701041 -105929109 + AT_rich Low_complexity Low_complexity 1 30 0 645 219 0 8 chr5 93701042 93701165 -105928985 - FLAM_A SINE Alu -11 122 1 21438 39 0 0 chr5 93701329 93703981 -105926169 + L1P LINE L1 1053 3704 -2442 552 83 0 12 chr5 93704082 93704166 -105925984 - AluY SINE Alu -228 83 1 691 252 37 47 chr5 93705198 93705412 -105924738 + MIR SINE MIR 46 257 -5 2145 118 0 0 chr5 93706122 93706410 -105923740 + AluSx SINE Alu 1 288 -24 23 33 0 0 chr5 93706410 93706440 -105923710 + AT_rich Low_complexity Low_complexity 1 30 0 629 295 74 22 chr5 93706580 93706851 -105923299 + MLT1L LTR MaLR 19 303 -312 342 235 314 0 chr5 93706855 93707008 -105923142 + L1MC5 LINE L1 7031 7231 -730 931 243 165 23 chr5 93707159 93707686 -105922464 + L1MC5 LINE L1 7264 7865 -96 1268 224 34 68 chr5 93709667 93710140 -105920010 - MER110A LTR ERV1 0 468 44 2193 162 10 10 chr5 93711362 93711757 -105918393 + L1PA16 LINE L1 5479 5873 -293 1525 118 34 25 chr5 93711757 93711994 -105918156 - THE1C LTR MaLR -136 239 1 568 268 21 5 chr5 93711994 93712216 -105917934 + L1MC4a LINE L1 7568 7967 -28 22 0 0 0 chr5 93712247 93712269 -105917881 + AT_rich Low_complexity Low_complexity 1 22 0 192 125 0 0 chr5 93712569 93712601 -105917549 + (TTA)n Simple_repeat Simple_repeat 3 34 0 180 228 51 76 chr5 93712625 93712704 -105917446 - MIR SINE MIR -87 175 99 2375 50 12 47 chr5 93713175 93713496 -105916654 - AluY SINE Alu -1 310 1 25 0 0 0 chr5 93713658 93713683 -105916467 + AT_rich Low_complexity Low_complexity 1 25 0 439 267 40 13 chr5 93714527 93714677 -105915473 + MLT1L LTR MaLR 460 613 -2 26 0 0 0 chr5 93714708 93714734 -105915416 + AT_rich Low_complexity Low_complexity 1 26 0 32 43 0 0 chr5 93716139 93716185 -105913965 + AT_rich Low_complexity Low_complexity 1 46 0 231 265 102 35 chr5 93716207 93716549 -105913601 + L1ME4a LINE L1 5631 5994 -127 180 0 0 0 chr5 93718150 93718170 -105911980 + (A)n Simple_repeat Simple_repeat 1 20 0 840 322 214 33 chr5 93718287 93719299 -105910851 - L3 LINE CR1 -72 1505 310 1956 145 0 3 chr5 93720101 93720391 -105909759 + AluJb SINE Alu 1 289 -23 53 30 0 0 chr5 93720433 93720500 -105909650 + AT_rich Low_complexity Low_complexity 1 67 0 275 276 23 23 chr5 93721573 93721660 -105908490 + MER5B DNA MER1_type 88 174 -4 860 270 57 20 chr5 93722570 93722870 -105907280 - L1MC/D LINE L1 -2181 5627 5317 44 0 0 0 chr5 93723015 93723059 -105907091 + AT_rich Low_complexity Low_complexity 1 44 0 232 257 179 0 chr5 93723970 93724110 -105906040 - MER34C LTR ERV1 -83 502 338 1625 348 76 13 chr5 93724390 93725385 -105904765 - HERVL LTR ERVL -2878 2776 1719 1176 180 65 13 chr5 93725523 93725950 -105904200 - LTR54 LTR ERV1 0 510 1 322 221 0 0 chr5 93725956 93726024 -105904126 + L1M4 LINE L1 5019 5086 -1060 2158 178 5 15 chr5 93726029 93726434 -105903716 - MER57A LTR ERV1 -2 401 1 549 224 0 22 chr5 93726434 93726568 -105903582 - MER57A-int LTR ERV1 0 7537 7407 860 204 102 49 chr5 93726568 93726853 -105903297 - LTR54 LTR ERV1 -210 300 1 1642 174 25 11 chr5 93726853 93727134 -105903016 - MER57A-int LTR ERV1 -393 7144 6860 265 297 74 61 chr5 93727312 93727483 -105902667 - MIR SINE MIR -66 142 17 276 279 20 112 chr5 93727572 93727769 -105902381 + L3 LINE CR1 963 1141 -436 321 320 100 52 chr5 93728743 93728993 -105901157 + L3 LINE CR1 1307 1568 -9 199 328 140 12 chr5 93729526 93729697 -105900453 - L2 LINE L2 -741 2573 2381 290 98 20 0 chr5 93729940 93729991 -105900159 + (TC)n Simple_repeat Simple_repeat 2 53 0 856 334 83 11 chr5 93730876 93731363 -105898787 + L2 LINE L2 2516 3034 -238 13140 27 0 15 chr5 93731464 93733792 -105896358 + L1PA2 LINE L1 3838 6151 -4 1558 237 45 8 chr5 93733801 93734316 -105895834 + L1MB3 LINE L1 3073 3606 -2540 2535 218 6 20 chr5 93734317 93734812 -105895338 - LTR42 LTR ERVL -7 488 1 2702 180 36 40 chr5 93734812 93735430 -105894720 + L1MB3 LINE L1 3602 4216 -1930 7568 154 21 6 chr5 93735438 93736715 -105893435 - HSMAR2 DNA Mariner -5 1297 2 4652 189 26 35 chr5 93736718 93738703 -105891447 + L1MB3 LINE L1 4220 6183 0 191 111 0 0 chr5 93738735 93738762 -105891388 + (GGA)n Simple_repeat Simple_repeat 3 29 0 702 269 68 26 chr5 93738954 93739188 -105890962 + MIR SINE MIR 9 252 -10 36057 65 10 2 chr5 93740305 93745836 -105884314 + L1PA5 LINE L1 578 6148 -6 726 155 39 8 chr5 93745864 93745993 -105884157 + AluSq/x SINE Alu 1 133 -180 221 250 39 0 chr5 93746831 93746883 -105883267 - MIR3 SINE MIR -28 180 127 321 396 46 38 chr5 93747753 93747993 -105882157 - L2 LINE L2 -51 3221 2980 290 273 13 26 chr5 93748293 93748370 -105881780 + MER20B DNA MER1_type 65 140 -643 341 310 17 9 chr5 93748501 93748617 -105881533 + L2 LINE L2 3160 3276 -37 2182 125 0 0 chr5 93750174 93750471 -105879679 + AluSx SINE Alu 1 297 -15 305 186 14 0 chr5 93751545 93751615 -105878535 + (TA)n Simple_repeat Simple_repeat 2 72 0 212 234 16 16 chr5 93751801 93751865 -105878285 + (TA)n Simple_repeat Simple_repeat 2 65 0 393 75 0 0 chr5 93751872 93751925 -105878225 + (TG)n Simple_repeat Simple_repeat 2 54 0 276 149 0 0 chr5 93751925 93751972 -105878178 + (TA)n Simple_repeat Simple_repeat 2 48 0 518 314 65 6 chr5 93756456 93756625 -105873525 - MIR3 SINE MIR 0 208 30 * 706 241 58 6 chr5 93756621 93756795 -105873355 - MER5A DNA MER1_type -6 183 1 28 29 0 0 chr5 93757477 93757512 -105872638 + AT_rich Low_complexity Low_complexity 1 35 0 333 0 0 0 chr5 93758851 93758888 -105871262 + (TG)n Simple_repeat Simple_repeat 1 37 0 213 39 0 0 chr5 93758887 93758913 -105871237 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 404 259 135 29 chr5 93759656 93759826 -105870324 - MIR3 SINE MIR -7 201 14 1544 156 26 22 chr5 93761334 93761603 -105868547 + AluJo SINE Alu 6 275 -37 264 111 0 0 chr5 93763610 93763655 -105866495 + (TA)n Simple_repeat Simple_repeat 1 45 0 1397 173 0 9 chr5 93764782 93765008 -105865142 - AluJb SINE Alu -88 224 1 270 319 25 25 chr5 93765189 93765346 -105864804 + MER103 DNA DNA 7 163 -3 360 257 79 10 chr5 93765424 93765549 -105864601 - MIR SINE MIR -63 145 45 23 33 0 0 chr5 93766061 93766091 -105864059 + AT_rich Low_complexity Low_complexity 1 30 0 354 279 88 31 chr5 93767127 93767353 -105862797 + LTR16C LTR ERVL 237 475 -16 591 240 98 95 chr5 93767361 93768113 -105862037 - LTR41 LTR ERVL 0 795 25 309 326 87 14 chr5 93768587 93768725 -105861425 + MIR SINE MIR 37 184 -78 276 257 0 81 chr5 93768744 93768818 -105861332 - L2 LINE L2 0 3313 3246 192 305 134 13 chr5 93769271 93769390 -105860760 - MIR SINE MIR -65 143 15 22 0 0 0 chr5 93769558 93769580 -105860570 + AT_rich Low_complexity Low_complexity 1 22 0 290 87 22 0 chr5 93770449 93770495 -105859655 + (CA)n Simple_repeat Simple_repeat 2 48 0 21 57 0 0 chr5 93773822 93773857 -105856293 + AT_rich Low_complexity Low_complexity 1 35 0 408 200 0 0 chr5 93774478 93774573 -105855577 + GA-rich Low_complexity Low_complexity 4 98 0 704 296 45 45 chr5 93774720 93775075 -105855075 - L2 LINE L2 -10 3303 2949 329 295 16 47 chr5 93775282 93775431 -105854719 - MIR3 SINE MIR -23 185 37 232 431 54 0 chr5 93775413 93775580 -105854570 + L2 LINE L2 3091 3266 -6 * 362 257 53 35 chr5 93777140 93777253 -105852897 - MER5B DNA MER1_type -63 115 1 406 294 26 26 chr5 93778144 93778297 -105851853 + MER63A DNA MER1_type 58 210 0 28 95 0 0 chr5 93779737 93779821 -105850329 + AT_rich Low_complexity Low_complexity 1 84 0 1907 96 4 37 chr5 93781656 93781928 -105848222 - AluSq SINE Alu -48 265 3 321 282 50 74 chr5 93781940 93782142 -105848008 - HAL1b LINE L1 -498 850 654 374 299 77 31 chr5 93782165 93782426 -105847724 - HAL1b LINE L1 -776 572 300 423 0 0 0 chr5 93782842 93782889 -105847261 + (TA)n Simple_repeat Simple_repeat 2 48 0 1004 234 22 112 chr5 93783112 93783513 -105846637 - MLT1A1 LTR MaLR 0 365 1 3361 218 52 27 chr5 93783576 93784352 -105845798 - MER21B LTR ERV1 -57 806 12 1089 248 13 0 chr5 93785145 93785379 -105844771 - MIR SINE MIR -20 242 6 34 24 0 0 chr5 93785723 93785764 -105844386 + AT_rich Low_complexity Low_complexity 1 41 0 2293 94 3 0 chr5 93785883 93786182 -105843968 - AluSg SINE Alu -10 300 1 16757 222 52 28 chr5 93786291 93787725 -105842425 - L1PA15 LINE L1 0 7603 6205 236 53 26 0 chr5 93787725 93787763 -105842387 + (TTG)n Simple_repeat Simple_repeat 1 39 0 16757 222 52 28 chr5 93787763 93793152 -105836998 - L1PA15 LINE L1 -1398 6205 598 8076 201 28 36 chr5 93793218 93795268 -105834882 - L1 LINE L1 -1681 5903 3870 26 64 0 0 chr5 93795652 93795699 -105834451 + AT_rich Low_complexity Low_complexity 1 47 0 296 266 8 89 chr5 93795980 93796104 -105834046 + MIR3 SINE MIR 68 181 -27 449 330 81 6 chr5 93796421 93796594 -105833556 + MIR SINE MIR 20 205 -57 348 262 0 12 chr5 93797158 93797242 -105832908 + MER5A DNA MER1_type 9 91 -98 13413 164 29 57 chr5 93797755 93800811 -105829339 + L1M4c LINE L1 13 2959 -3423 2156 122 0 0 chr5 93800811 93801105 -105829045 - AluSx SINE Alu -18 294 1 13413 164 29 57 chr5 93801105 93801458 -105828692 + L1M4c LINE L1 2959 3320 -3062 5948 51 152 9 chr5 93801467 93802323 -105827827 + L1P LINE L1 3 980 -5166 432 262 119 35 chr5 93802460 93802662 -105827488 + L2 LINE L2 2368 2586 -728 270 266 166 36 chr5 93802672 93802811 -105827339 + MER5A DNA MER1_type 33 189 0 * 706 322 126 44 chr5 93802811 93803426 -105826724 + L2 LINE L2 2583 3263 -50 1993 125 32 0 chr5 93803427 93803728 -105826422 + AluSq SINE Alu 1 313 0 46 54 0 0 chr5 93803769 93803843 -105826307 + AT_rich Low_complexity Low_complexity 1 74 0 1462 194 8 0 chr5 93804070 93804333 -105825817 - AluJb SINE Alu -5 307 43 227 209 132 22 chr5 93804765 93804856 -105825294 - Tigger1 DNA MER2_type -1503 915 815 586 313 39 106 chr5 93805239 93805327 -105824823 - L2 LINE L2 -4 3309 3217 1559 202 3 3 chr5 93805327 93805629 -105824521 + AluJo SINE Alu 1 302 0 586 313 39 106 chr5 93805629 93806003 -105824147 - L2 LINE L2 -96 3217 2877 194 281 0 97 chr5 93806084 93806198 -105823952 + MIR SINE MIR 160 262 0 2114 137 0 0 chr5 93806900 93807200 -105822950 + AluSx SINE Alu 1 300 -12 338 318 83 67 chr5 93807326 93807638 -105822512 + L2 LINE L2 2703 3025 -247 2278 98 3 0 chr5 93807638 93807934 -105822216 + AluSp SINE Alu 1 297 -16 338 318 83 67 chr5 93807934 93808114 -105822036 + L2 LINE L2 3025 3201 -71 4180 143 53 6 chr5 93808137 93808838 -105821312 - L1PA16 LINE L1 -9 6157 5424 273 163 61 0 chr5 93808868 93808917 -105821233 - L2 LINE L2 -69 3244 3193 21 0 0 0 chr5 93809072 93809093 -105821057 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr5 93809127 93809160 -105820990 + (TA)n Simple_repeat Simple_repeat 2 34 0 3420 158 34 17 chr5 93809273 93809929 -105820221 - L1MB8 LINE L1 0 6178 5512 1409 191 50 68 chr5 93810056 93810453 -105819697 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr5 93812258 93812280 -105817870 + AT_rich Low_complexity Low_complexity 1 22 0 2360 99 8 30 chr5 93813586 93813882 -105816268 + THE1A LTR MaLR 1 289 -66 2154 104 24 0 chr5 93813882 93814179 -105815971 - AluSg SINE Alu -6 304 1 2360 99 8 30 chr5 93814179 93814245 -105815905 + THE1A LTR MaLR 289 355 0 27 29 0 0 chr5 93814783 93814817 -105815333 + AT_rich Low_complexity Low_complexity 1 34 0 210 71 0 0 chr5 93814831 93814859 -105815291 + (TATAA)n Simple_repeat Simple_repeat 5 32 0 6583 252 65 56 chr5 93817140 93818190 -105811960 - L1M2 LINE L1 -4137 2712 1673 1581 138 0 0 chr5 93818190 93818408 -105811742 - AluSx SINE Alu -90 222 5 6583 252 65 56 chr5 93818408 93819963 -105810187 - L1M2 LINE L1 -5176 1673 84 1212 184 109 67 chr5 93819965 93820296 -105809854 + MLT2B1 LTR ERVL 102 446 -74 296 248 0 18 chr5 93820296 93820409 -105809741 + (TATATG)n Simple_repeat Simple_repeat 3 113 0 227 130 22 22 chr5 93820409 93820455 -105809695 + MLT2B1 LTR ERVL 464 509 -11 360 340 47 24 chr5 93820457 93820682 -105809468 - MIR3 SINE MIR -30 232 2 22 56 0 0 chr5 93821143 93821179 -105808971 + AT_rich Low_complexity Low_complexity 1 36 0 180 0 0 0 chr5 93821372 93821392 -105808758 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 425 241 35 114 chr5 93821394 93821622 -105808528 - L2 LINE L2 -9 3304 3095 316 214 270 0 chr5 93821641 93821730 -105808420 - MER81 DNA DNA -1 113 1 369 252 118 30 chr5 93821784 93821919 -105808231 - L2 LINE L2 -342 2972 2826 2362 106 0 0 chr5 93823437 93823748 -105806402 - AluSx SINE Alu -1 311 1 192 184 0 0 chr5 93823882 93823931 -105806219 + T-rich Low_complexity Low_complexity 1 49 0 237 33 0 0 chr5 93823963 93823993 -105806157 + (CA)n Simple_repeat Simple_repeat 2 31 0 276 299 78 42 chr5 93824036 93824203 -105805947 + MIR SINE MIR 90 262 0 1816 159 10 33 chr5 93825428 93825818 -105804332 + L1MA7 LINE L1 5911 6291 0 399 280 98 33 chr5 93825891 93826105 -105804045 + MLT1L LTR MaLR 382 609 -6 623 319 23 80 chr5 93826356 93826707 -105803443 + L2 LINE L2 2937 3267 -5 21 0 0 0 chr5 93827497 93827518 -105802632 + AT_rich Low_complexity Low_complexity 1 21 0 207 182 45 0 chr5 93828237 93828281 -105801869 + (ATTG)n Simple_repeat Simple_repeat 3 48 0 979 88 0 0 chr5 93828631 93828756 -105801394 + AluY SINE Alu 171 295 -16 218 370 120 28 chr5 93830631 93830955 -105799195 - L2 LINE L2 -8 3264 2911 1811 212 73 24 chr5 93830985 93831452 -105798698 + LTR2B LTR ERV1 1 490 0 369 216 103 41 chr5 93831470 93831567 -105798583 + L2 LINE L2 3208 3310 -3 366 362 38 62 chr5 93831563 93831753 -105798397 - L2 LINE L2 -429 2885 2692 * 568 217 23 34 chr5 93831753 93831928 -105798222 - MER104 DNA MER2_type -3 177 5 366 362 38 62 chr5 93831928 93832160 -105797990 - L2 LINE L2 -622 2692 2473 374 274 9 9 chr5 93832185 93832298 -105797852 - L2 LINE L2 -1017 2297 2185 408 327 96 56 chr5 93832337 93832731 -105797419 - L2 LINE L2 -619 2695 2286 523 360 40 16 chr5 93832846 93833096 -105797054 + MIR SINE MIR 7 262 0 183 240 20 0 chr5 93833166 93833216 -105796934 - L2 LINE L2 -1 3312 3262 1804 111 19 4 chr5 93834190 93834460 -105795690 - L1PA8 LINE L1 -6 6166 5893 26 0 0 0 chr5 93834466 93834492 -105795658 + AT_rich Low_complexity Low_complexity 1 26 0 789 182 0 8 chr5 93835179 93835311 -105794839 + FLAM_A SINE Alu 1 131 -2 571 262 105 71 chr5 93836125 93836449 -105793701 + HAL1 LINE L1 2 336 -2171 779 306 20 30 chr5 93836464 93836765 -105793385 + HAL1 LINE L1 418 715 -1792 487 310 14 78 chr5 93836739 93837087 -105793063 + HAL1 LINE L1 1153 1478 -1029 * 287 327 47 41 chr5 93837322 93837788 -105792362 + L1ME LINE L1 530 1295 -4706 433 209 189 20 chr5 93837801 93837949 -105792201 + HAL1 LINE L1 1739 1911 -596 871 274 74 30 chr5 93837973 93838474 -105791676 + HAL1 LINE L1 1980 2502 -5 1768 162 30 49 chr5 93838841 93839363 -105790787 + MLT2A2 LTR ERVL 31 546 -8 1865 185 0 0 chr5 93839637 93839929 -105790221 + AluJb SINE Alu 1 292 -20 266 191 73 29 chr5 93840281 93840349 -105789801 - MIR3 SINE MIR -13 195 125 2143 193 16 0 chr5 93840354 93840732 -105789418 - LTR39 LTR ERV1 0 783 400 1840 203 54 31 chr5 93840781 93841252 -105788898 - LTR39 LTR ERV1 -390 393 1 2275 243 52 7 chr5 93842747 93843348 -105786802 + L1MEc LINE L1 637 1264 -5561 528 263 86 33 chr5 93843381 93843711 -105786439 + L1MEc LINE L1 1327 1612 -4930 4159 11 0 0 chr5 93894653 93895146 -105735004 - L1P1 LINE L1 -429 5726 5234 * 6417 25 0 0 chr5 93895145 93895908 -105734242 + L1P1 LINE L1 4480 5242 -904 197 119 24 0 chr5 93895990 93896032 -105734118 + GA-rich Low_complexity Low_complexity 1 43 0 1245 163 4 54 chr5 93896277 93896516 -105733634 - AluSx SINE Alu -85 227 1 557 131 0 0 chr5 93896516 93896600 -105733550 + L1 LINE L1 3536 3619 -2527 3785 169 67 1 chr5 93896614 93897402 -105732748 + L1 LINE L1 4122 4961 -1185 1622 126 21 105 chr5 93897405 93897738 -105732412 - AluYb8 SINE Alu -13 305 1 1960 255 123 56 chr5 93897745 93898160 -105731990 - HAL1 LINE L1 -475 2032 1646 2395 76 0 16 chr5 93898160 93898463 -105731687 - AluY SINE Alu -13 298 1 1960 255 123 56 chr5 93898463 93899070 -105731080 - HAL1 LINE L1 -861 1646 941 693 162 70 84 chr5 93899070 93899354 -105730796 - L1MC5 LINE L1 -49 7912 7633 287 174 92 31 chr5 93899690 93899788 -105730362 - L1MC5 LINE L1 -50 7911 7808 1352 173 93 25 chr5 93899798 93900076 -105730074 - AluJo SINE Alu -10 302 6 231 256 54 60 chr5 93900092 93900260 -105729890 - L1MC5 LINE L1 -185 7776 7610 203 256 0 0 chr5 93900266 93900309 -105729841 + CT-rich Low_complexity Low_complexity 3 45 0 682 236 16 62 chr5 93900322 93900580 -105729570 - L1MC5 LINE L1 -385 7576 7331 483 317 42 31 chr5 93900583 93900842 -105729308 - L1M4 LINE L1 -881 5265 5004 2282 97 0 0 chr5 93901122 93901420 -105728730 - AluSp SINE Alu -15 298 1 1869 92 0 4 chr5 93901422 93901672 -105728478 - AluSx SINE Alu -8 304 56 1255 272 29 29 chr5 93901775 93902154 -105727996 - LTR40b LTR ERVL -1 461 83 693 197 0 29 chr5 93902157 93902294 -105727856 - FLAM_A SINE Alu 0 133 1 1917 112 3 46 chr5 93902322 93902626 -105727524 + AluSx SINE Alu 1 291 -21 1304 174 35 19 chr5 93902674 93902932 -105727218 - AluJb SINE Alu -50 262 1 1985 223 46 14 chr5 93902939 93903542 -105726608 + L1MB7 LINE L1 4850 5467 -717 883 217 52 46 chr5 93903550 93903812 -105726338 - MSTD LTR MaLR -13 383 85 2117 96 16 45 chr5 93903812 93904124 -105726026 - AluSq SINE Alu -8 305 3 883 217 52 46 chr5 93904124 93904190 -105725960 - MSTD LTR MaLR -311 85 21 3328 179 48 6 chr5 93904194 93904900 -105725250 + L1MB7 LINE L1 5449 6184 0 434 173 27 13 chr5 93904912 93904987 -105725163 - LTR40a LTR ERVL -443 76 1 29 60 0 0 chr5 93905084 93905134 -105725016 + AT_rich Low_complexity Low_complexity 1 50 0 2323 86 0 0 chr5 93905135 93905426 -105724724 + AluSc SINE Alu 1 291 -18 448 320 51 64 chr5 93905656 93905861 -105724289 - HAL1 LINE L1 -1737 770 569 2172 128 0 0 chr5 93905861 93906159 -105723991 - AluSx SINE Alu -14 298 1 448 320 51 64 chr5 93906159 93906265 -105723885 - HAL1 LINE L1 -1938 569 463 325 186 71 0 chr5 93906288 93906358 -105723792 - MER69 DNA AcHobo -2 2524 2450 * 345 237 6 109 chr5 93906355 93906407 -105723743 - MER69 DNA AcHobo -2379 147 91 1933 159 3 0 chr5 93906407 93906703 -105723447 + AluJb SINE Alu 3 299 -13 345 237 6 109 chr5 93906703 93906806 -105723344 - MER69 DNA AcHobo -2435 91 8 1075 294 13 10 chr5 93906925 93907238 -105722912 - HAL1 LINE L1 -2184 323 10 501 253 91 75 chr5 93907279 93907506 -105722644 - L1ME LINE L1 -593 5571 5349 2121 122 0 3 chr5 93907506 93907801 -105722349 - AluSg SINE Alu -16 294 1 501 253 91 75 chr5 93907801 93907829 -105722321 - L1ME LINE L1 -815 5349 5323 951 234 87 102 chr5 93907829 93908379 -105721771 + MER34 LTR ERV1 1 542 0 501 253 91 75 chr5 93908379 93908430 -105721720 - L1ME LINE L1 -841 5323 5259 414 251 146 28 chr5 93908495 93908782 -105721368 - L1ME LINE L1 -1022 5124 4804 180 214 0 0 chr5 93909699 93909755 -105720395 + (TG)n Simple_repeat Simple_repeat 1 56 0 23 54 0 0 chr5 93910291 93910328 -105719822 + AT_rich Low_complexity Low_complexity 1 37 0 483 262 18 6 chr5 93911763 93911927 -105718223 + MER103 DNA DNA 1 166 0 733 201 147 0 chr5 93912009 93912193 -105717957 + LTR40b LTR ERVL 252 462 0 365 326 11 32 chr5 93912193 93912383 -105717767 + L1MEc LINE L1 1949 2134 -4262 5081 232 65 75 chr5 93912399 93913074 -105717076 + L1MEc LINE L1 2242 2922 -3293 1873 153 0 23 chr5 93913074 93913381 -105716769 - AluSx SINE Alu -12 300 1 5081 232 65 75 chr5 93913381 93914282 -105715868 + L1MEc LINE L1 2922 3790 -2425 1519 175 16 45 chr5 93914282 93914590 -105715560 + AluJo SINE Alu 1 299 -13 5081 232 65 75 chr5 93914590 93915431 -105714719 + L1MEc LINE L1 3790 4637 -1578 692 218 88 47 chr5 93915446 93915582 -105714568 + MER3 DNA MER1_type 4 152 -57 1265 192 78 19 chr5 93915582 93915853 -105714297 - AluJo SINE Alu -13 289 3 692 218 88 47 chr5 93915853 93915909 -105714241 + MER3 DNA MER1_type 152 204 -5 1950 219 77 59 chr5 93915912 93916079 -105714071 + L1MEc LINE L1 4648 4811 -1422 280 86 0 0 chr5 93916079 93916114 -105714036 + U2 snRNA snRNA 1 35 -153 1950 219 77 59 chr5 93916114 93916846 -105713304 + L1MEc LINE L1 4811 5581 -652 * 6549 125 50 3 chr5 93916830 93916846 -105713304 - L1PBa LINE L1 -3449 3413 3399 1925 142 27 0 chr5 93916846 93917142 -105713008 + AluSx SINE Alu 1 304 -8 6549 125 50 3 chr5 93917142 93918614 -105711536 - L1 LINE L1 -3463 3399 1853 2040 212 0 7 chr5 93918613 93919065 -105711085 + L1 LINE L1 3398 3846 -3016 * 1453 108 0 0 chr5 93919071 93919256 -105710894 - AluSx SINE Alu -127 185 1 1355 324 182 46 chr5 93919264 93919663 -105710487 - HAL1 LINE L1 -1229 1278 935 4924 106 62 4 chr5 93919663 93920459 -105709691 + L1MA4 LINE L1 5457 6298 -2 1355 324 182 46 chr5 93920459 93920726 -105709424 - HAL1 LINE L1 -1572 935 706 261 0 0 0 chr5 93920726 93920755 -105709395 + (CA)n Simple_repeat Simple_repeat 1 29 0 1355 324 182 46 chr5 93920755 93921201 -105708949 - HAL1 LINE L1 -1801 706 13 295 291 32 15 chr5 93921984 93922098 -105708052 + MIR SINE MIR 28 141 -67 234 0 0 0 chr5 93925456 93925482 -105704668 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2181 96 20 0 chr5 93925679 93925980 -105704170 - AluSq SINE Alu -6 307 1 738 265 143 52 chr5 93926677 93927020 -105703130 + L2 LINE L2 2932 3305 -8 208 299 88 54 chr5 93927087 93927234 -105702916 - L2 LINE L2 -166 3106 2955 2649 77 36 3 chr5 93927662 93928027 -105702123 - MER51B LTR ERV1 0 377 1 221 250 21 0 chr5 93928078 93928126 -105702024 - MIR3 SINE MIR -3 205 157 249 326 22 0 chr5 93928432 93928524 -105701626 + MIR SINE MIR 58 151 -57 1156 89 76 0 chr5 93928536 93928693 -105701457 - AluSg/x SINE Alu -10 300 132 914 56 0 0 chr5 93928693 93928800 -105701350 + AluSc SINE Alu 21 127 -182 736 253 0 0 chr5 93928800 93928962 -105701188 - MER5B DNA MER1_type -2 176 15 2240 105 0 3 chr5 93929159 93929472 -105700678 + AluSx SINE Alu 1 312 0 243 156 266 0 chr5 93930021 93930085 -105700065 + L2 LINE L2 3231 3311 -2 210 268 21 82 chr5 93930582 93930679 -105699471 - MER5B DNA MER1_type -63 115 25 596 249 26 17 chr5 93930976 93931165 -105698985 + L1MC5 LINE L1 7061 7250 -728 481 188 75 30 chr5 93931304 93931437 -105698713 + L1MC5 LINE L1 7299 7437 -524 427 288 196 7 chr5 93931446 93931599 -105698551 + MER5A DNA MER1_type 8 189 0 345 234 140 22 chr5 93931617 93931974 -105698176 + L1MC5 LINE L1 7452 7880 -81 624 175 26 0 chr5 93932178 93932292 -105697858 + LTR8A LTR ERV1 1 117 -610 4550 107 14 31 chr5 93932293 93932828 -105697322 + LTR8 LTR ERV1 1 523 -168 2338 82 3 10 chr5 93932828 93933134 -105697016 + AluSp SINE Alu 1 304 -9 4550 107 14 31 chr5 93933134 93933301 -105696849 + LTR8 LTR ERV1 523 691 0 1612 104 36 0 chr5 93933492 93933712 -105696438 + AluSx SINE Alu 1 228 -84 37 0 0 0 chr5 93933712 93933749 -105696401 + AT_rich Low_complexity Low_complexity 1 37 0 488 243 99 7 chr5 93934012 93934110 -105696040 - MER5B DNA MER1_type -7 171 53 632 195 98 11 chr5 93934110 93934284 -105695866 - MER5A DNA MER1_type 0 189 1 488 243 99 7 chr5 93934284 93934337 -105695813 - MER5B DNA MER1_type -125 53 6 213 231 115 77 chr5 93934989 93935093 -105695057 + MIR3 SINE MIR 91 198 -10 882 265 141 32 chr5 93936403 93936902 -105693248 + L2 LINE L2 2762 3313 0 22 0 0 0 chr5 93937230 93937252 -105692898 + AT_rich Low_complexity Low_complexity 1 22 0 2559 68 0 0 chr5 93937348 93937659 -105692491 - AluY SINE Alu 0 311 1 21 95 0 0 chr5 93938249 93938312 -105691838 + AT_rich Low_complexity Low_complexity 1 63 0 594 268 61 9 chr5 93938462 93938690 -105691460 - L1ME4a LINE L1 -225 5896 5657 2044 120 10 32 chr5 93939227 93939535 -105690615 - AluSx SINE Alu -11 301 1 2139 138 0 0 chr5 93939794 93940085 -105690065 + AluSx SINE Alu 3 293 -19 1867 138 3 46 chr5 93940350 93940676 -105689474 - AluJo SINE Alu 0 312 1 288 224 26 0 chr5 93940743 93940819 -105689331 + (TA)n Simple_repeat Simple_repeat 2 79 0 4911 195 47 30 chr5 93941452 93942568 -105687582 + Looper DNA T2_type 3 1145 -413 2063 79 76 0 chr5 93942568 93942845 -105687305 + AluY SINE Alu 1 298 -13 4911 195 47 30 chr5 93942845 93942980 -105687170 + Looper DNA T2_type 1145 1276 -282 1062 242 4 0 chr5 93942962 93943210 -105686940 + Looper DNA T2_type 1175 1423 -135 * 1791 153 13 3 chr5 93943211 93943511 -105686639 - AluJb SINE Alu -9 303 1 3884 155 58 61 chr5 93943523 93943679 -105686471 - L1MB7 LINE L1 -1 6183 6028 1836 145 0 29 chr5 93943679 93943989 -105686161 - AluSg SINE Alu -9 301 1 3884 155 58 61 chr5 93943989 93944711 -105685439 - L1MB7 LINE L1 -156 6028 5308 412 128 60 68 chr5 93944759 93944876 -105685274 + Looper DNA T2_type 1443 1558 0 2200 79 11 0 chr5 93945940 93946242 -105683908 - AluY SINE Alu 0 309 5 352 343 130 0 chr5 93946534 93946680 -105683470 - MIR3 SINE MIR -25 183 19 22 0 0 0 chr5 93947146 93947168 -105682982 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 93947606 93947628 -105682522 + AT_rich Low_complexity Low_complexity 1 22 0 1628 188 0 14 chr5 93947802 93948084 -105682066 + AluJb SINE Alu 1 278 -34 1125 176 47 16 chr5 93948275 93948550 -105681600 - L1PA16 LINE L1 -2 6172 5857 398 258 106 15 chr5 93948754 93948886 -105681264 - L2 LINE L2 -5 3308 3165 997 301 84 53 chr5 93948937 93949629 -105680521 - L2 LINE L2 -884 2430 1718 308 140 0 0 chr5 93949669 93949726 -105680424 - L1MB8 LINE L1 -2 6176 6120 22 0 0 0 chr5 93950489 93950511 -105679639 + AT_rich Low_complexity Low_complexity 1 22 0 30 27 0 0 chr5 93952485 93952522 -105677628 + AT_rich Low_complexity Low_complexity 1 37 0 685 264 132 62 chr5 93952558 93953058 -105677092 - L1MC4a LINE L1 -1748 6060 5526 432 340 37 5 chr5 93953090 93953281 -105676869 - MIR SINE MIR 0 262 66 2363 74 0 10 chr5 93954257 93954554 -105675596 + AluY SINE Alu 1 294 -17 23 0 0 0 chr5 93954589 93954612 -105675538 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 93954723 93954752 -105675398 + AT_rich Low_complexity Low_complexity 1 29 0 1860 152 21 0 chr5 93955933 93956216 -105673934 + AluSx SINE Alu 3 291 -21 289 345 0 0 chr5 93956512 93956654 -105673496 + GA-rich Low_complexity Low_complexity 1 142 0 2007 88 15 0 chr5 93958761 93959022 -105671128 + AluSq SINE Alu 1 265 -48 206 245 133 82 chr5 93959042 93959140 -105671010 - L2 LINE L2 -1 3271 3169 403 349 78 67 chr5 93959336 93959919 -105670231 - L2 LINE L2 -5 3267 2678 248 170 142 113 chr5 93959968 93960074 -105670076 + MER20 DNA MER1_type 1 109 -110 1856 48 13 4 chr5 93960141 93960372 -105669778 + AluY SINE Alu 65 297 -14 792 227 62 88 chr5 93960964 93961387 -105668763 - L1MC5 LINE L1 -51 7910 7499 198 320 100 30 chr5 93963259 93963359 -105666791 + MIR SINE MIR 34 140 -68 524 206 0 0 chr5 93964593 93964685 -105665465 + AluJb SINE Alu 140 231 -81 367 143 0 0 chr5 93964689 93964752 -105665398 + AluJb SINE Alu 177 239 -63 198 0 0 0 chr5 93964753 93964775 -105665375 + (CA)n Simple_repeat Simple_repeat 2 23 0 920 152 19 19 chr5 93964963 93965121 -105665029 + FRAM SINE Alu 6 163 -13 23 33 0 0 chr5 93965130 93965160 -105664990 + AT_rich Low_complexity Low_complexity 1 30 0 207 271 0 0 chr5 93966387 93966435 -105663715 + (CA)n Simple_repeat Simple_repeat 1 48 0 24 53 0 0 chr5 93966676 93966714 -105663436 + AT_rich Low_complexity Low_complexity 1 38 0 28 71 0 0 chr5 93968473 93968529 -105661621 + AT_rich Low_complexity Low_complexity 1 56 0 358 235 117 31 chr5 93969904 93970066 -105660084 - MER104 DNA Tc2 0 180 5 689 313 71 58 chr5 93970375 93970641 -105659509 - L2 LINE L2 -828 2486 2225 2244 102 3 0 chr5 93970641 93970935 -105659215 + AluSx SINE Alu 1 295 -17 689 313 71 58 chr5 93970935 93971089 -105659061 - L2 LINE L2 -1089 2225 2055 758 234 96 8 chr5 93971089 93971328 -105658822 + MIR SINE MIR 3 262 0 689 313 71 58 chr5 93971328 93971453 -105658697 - L2 LINE L2 -1259 2055 1933 27 29 0 0 chr5 93971925 93971959 -105658191 + AT_rich Low_complexity Low_complexity 1 34 0 2024 130 128 8 chr5 93972038 93972406 -105657744 + MSTA LTR MaLR 17 428 0 277 250 45 18 chr5 93973074 93973186 -105656964 + Charlie2a DNA MER1_type 1405 1519 -1343 1217 205 75 75 chr5 93973214 93973869 -105656281 + Charlie2a DNA MER1_type 2203 2857 -5 378 280 73 87 chr5 93973976 93974412 -105655738 + L1ME4a LINE L1 5584 6013 -108 2447 56 3 3 chr5 93974591 93974895 -105655255 - AluY SINE Alu -7 304 1 2239 103 0 0 chr5 93975447 93975753 -105654397 - AluSx SINE Alu 0 306 1 34 55 0 0 chr5 93975911 93975966 -105654184 + AT_rich Low_complexity Low_complexity 1 55 0 715 302 139 12 chr5 93976662 93977092 -105653058 - L2 LINE L2 -834 2480 1996 591 182 35 7 chr5 93977214 93977352 -105652798 + Tigger4(Zombi) DNA MER2_type 2 146 -2585 * 2638 113 90 9 chr5 93977350 93977785 -105652365 + Tigger4(Zombi) DNA MER2_type 2262 2731 0 272 89 90 7 chr5 93980444 93980504 -105649646 + MADE1 DNA Mariner 46 80 0 438 254 154 38 chr5 93981513 93981753 -105648397 + L1MC/D LINE L1 5538 5805 -2003 182 269 39 0 chr5 93981822 93981874 -105648276 - L2 LINE L2 -60 3253 3200 180 152 0 0 chr5 93982012 93982045 -105648105 + (CA)n Simple_repeat Simple_repeat 2 34 0 640 259 47 51 chr5 93983624 93983860 -105646290 - L2 LINE L2 0 3313 3079 1040 232 143 9 chr5 93983885 93984200 -105645950 - L2 LINE L2 -380 2934 2578 525 238 66 0 chr5 93985533 93985655 -105644495 + Charlie1a DNA MER1_type 6 135 -1320 629 245 171 53 chr5 93985676 93985870 -105644280 - L2 LINE L2 -466 2848 2618 2363 74 0 32 chr5 93985870 93986181 -105643969 + AluY SINE Alu 4 304 -7 629 245 171 53 chr5 93986181 93986231 -105643919 - L2 LINE L2 -696 2618 2575 2501 183 14 81 chr5 93986243 93986309 -105643841 + Charlie1a DNA MER1_type 266 335 -2426 2118 134 0 0 chr5 93986309 93986607 -105643543 + AluSx SINE Alu 1 298 -14 2501 183 14 81 chr5 93986607 93986816 -105643334 + Charlie1a DNA MER1_type 335 556 -2205 1633 170 21 28 chr5 93986816 93987105 -105643045 + AluJb SINE Alu 1 287 -25 2501 183 14 81 chr5 93987105 93987544 -105642606 + Charlie1a DNA MER1_type 556 933 -522 1081 204 87 117 chr5 93987546 93988016 -105642134 - MER4C LTR ERV1 -4 461 6 1185 163 29 0 chr5 93988020 93988229 -105641921 + Charlie1a DNA MER1_type 928 1142 -313 4957 180 26 26 chr5 93988238 93988741 -105641409 + L1MB5 LINE L1 4263 4764 -1410 1938 173 66 36 chr5 93988741 93989180 -105640970 - LTR47A LTR ERVL 0 452 1 4957 180 26 26 chr5 93989180 93989714 -105640436 + L1MB5 LINE L1 4764 5296 -878 2175 123 3 0 chr5 93989714 93990024 -105640126 + AluY SINE Alu 1 311 0 4957 180 26 26 chr5 93990024 93990879 -105639271 + L1MB5 LINE L1 5296 6174 0 704 123 99 0 chr5 93990879 93991041 -105639109 + Charlie1a DNA MER1_type 1138 1315 -140 2077 133 50 14 chr5 93991383 93991743 -105638407 + THE1C LTR MaLR 1 373 -2 748 251 10 5 chr5 93992077 93992276 -105637874 - L1MC4 LINE L1 -151 7891 7692 2372 84 0 0 chr5 93992280 93992579 -105637571 - AluY SINE Alu -12 299 1 4229 129 50 57 chr5 93992613 93993522 -105636628 - MER4D LTR ERV1 0 866 1 1091 219 3 74 chr5 93993540 93993851 -105636299 - L1MC4 LINE L1 -369 7673 7385 323 302 163 45 chr5 93993854 93994056 -105636094 - MIR SINE MIR -36 226 1 24 32 0 0 chr5 93996005 93996036 -105634114 + AT_rich Low_complexity Low_complexity 1 31 0 306 134 0 175 chr5 93996117 93996214 -105633936 + MER116 DNA Mariner 1 80 0 308 313 153 0 chr5 93999234 93999378 -105630772 - MIR SINE MIR -12 250 85 1171 21 0 0 chr5 93999664 93999805 -105630345 + L1PA4 LINE L1 6014 6154 -1 1469 206 0 24 chr5 94000500 94000649 -105629501 - AluJb SINE Alu -30 282 142 2454 64 0 0 chr5 94000649 94000945 -105629205 - AluY SINE Alu -15 296 1 1469 206 0 24 chr5 94000945 94001082 -105629068 - AluJb SINE Alu -170 142 3 34 0 0 0 chr5 94001505 94001539 -105628611 + AT_rich Low_complexity Low_complexity 1 34 0 1950 155 0 0 chr5 94001620 94001910 -105628240 - AluSx SINE Alu -18 294 5 267 54 0 0 chr5 94002142 94002179 -105627971 + (GA)n Simple_repeat Simple_repeat 2 38 0 255 319 160 0 chr5 94003483 94003577 -105626573 + L2 LINE L2 3160 3268 -4 693 252 71 38 chr5 94003650 94003860 -105626290 + MER58A DNA MER1_type 2 218 -6 186 294 95 48 chr5 94004140 94004266 -105625884 + L2 LINE L2 3171 3302 -11 2564 142 31 9 chr5 94004745 94005168 -105624982 + MSTB1 LTR MaLR 1 432 0 431 149 23 0 chr5 94006124 94006211 -105623939 + CT-rich Low_complexity Low_complexity 2 90 0 976 322 63 34 chr5 94006211 94006720 -105623430 - L2 LINE L2 -19 3294 2772 392 216 97 60 chr5 94008060 94008194 -105621956 - MIR SINE MIR -4 258 120 215 238 0 32 chr5 94008753 94008816 -105621334 + GA-rich Low_complexity Low_complexity 1 61 0 27 73 0 0 chr5 94009496 94009551 -105620599 + AT_rich Low_complexity Low_complexity 1 55 0 25 0 0 0 chr5 94010101 94010126 -105620024 + AT_rich Low_complexity Low_complexity 1 25 0 458 308 33 0 chr5 94010142 94010262 -105619888 + MIR3 SINE MIR 60 183 -25 434 302 149 5 chr5 94010402 94010617 -105619533 - MIR SINE MIR -15 247 2 260 287 103 59 chr5 94011087 94011223 -105618927 - MIR SINE MIR -11 251 110 340 336 0 17 chr5 94011318 94011434 -105618716 - MIR3 SINE MIR -12 196 83 190 398 10 31 chr5 94011587 94011685 -105618465 + L2 LINE L2 3181 3276 -37 7729 215 53 27 chr5 94014604 94014689 -105615461 - L1MB7 LINE L1 -19 6663 6582 2154 110 0 7 chr5 94014689 94014981 -105615169 + AluSq SINE Alu 3 292 -21 7729 215 53 27 chr5 94014981 94017459 -105612691 - L1MB7 LINE L1 -100 6582 4170 2134 101 13 20 chr5 94017459 94017765 -105612385 - AluSx SINE Alu -6 306 3 7729 215 53 27 chr5 94017765 94018654 -105611496 - L1MB7 LINE L1 -2512 4170 3305 1475 249 44 26 chr5 94018654 94019043 -105611107 - MSTD LTR MaLR 0 396 1 7729 215 53 27 chr5 94019043 94019087 -105611063 - L1MB7 LINE L1 -3377 3305 3264 180 0 0 0 chr5 94019087 94019107 -105611043 + (TA)n Simple_repeat Simple_repeat 2 21 0 7729 215 53 27 chr5 94019107 94021747 -105608403 - L1MB7 LINE L1 -3418 3264 9 279 54 0 0 chr5 94022070 94022107 -105608043 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 661 210 1 20 chr5 94022172 94022340 -105607810 + L1P LINE L1 4775 4941 -1205 2093 165 6 0 chr5 94023017 94023363 -105606787 - MER7A DNA MER2_type 0 346 1 3305 187 18 12 chr5 94023576 94024298 -105605852 - L1 LINE L1 -1205 4941 4216 2136 253 11 5 chr5 94024294 94024923 -105605227 - L1 LINE L1 -2486 3660 3028 * 1500 116 5 0 chr5 94024942 94025180 -105604970 - AluSg/x SINE Alu 0 324 86 32646 72 14 37 chr5 94025837 94031504 -105598646 - L1PA6 LINE L1 -11 6143 612 2368 272 5 13 chr5 94031527 94032281 -105597869 - L1P LINE L1 -3129 3017 2270 1325 226 7 24 chr5 94032285 94032581 -105597569 - AluJo SINE Alu -21 291 1 634 235 107 56 chr5 94033688 94033922 -105596228 + MIR SINE MIR 17 262 0 710 274 140 60 chr5 94034141 94034605 -105595545 - MLT1G1 LTR MaLR -20 575 75 211 211 58 19 chr5 94035602 94035654 -105594496 - L3b LINE CR1 -244 1339 1286 232 312 72 0 chr5 94035822 94035947 -105594203 - L1MC4 LINE L1 0 8042 7909 * 639 268 79 44 chr5 94035937 94036521 -105593629 - L1MC5 LINE L1 -218 7743 7249 1352 235 56 66 chr5 94036526 94037214 -105592936 - L1MC4 LINE L1 -765 7196 6546 2121 122 0 10 chr5 94037267 94037570 -105592580 - AluSx SINE Alu -11 301 2 247 151 0 123 chr5 94037748 94037821 -105592329 - L1MC4a LINE L1 -1451 6357 6294 230 282 282 11 chr5 94037889 94038063 -105592087 + L1MC4a LINE L1 5949 6169 -1639 661 231 97 64 chr5 94038086 94038415 -105591735 - L2 LINE L2 -1004 2310 1971 290 228 200 14 chr5 94039528 94039673 -105590477 - L1ME4a LINE L1 -16 6105 5934 25 31 0 0 chr5 94039786 94039818 -105590332 + AT_rich Low_complexity Low_complexity 1 32 0 909 271 116 62 chr5 94039891 94040426 -105589724 - MLT1G LTR MaLR -7 583 20 885 60 45 0 chr5 94040669 94040802 -105589348 - L1MA3 LINE L1 0 6305 6167 2014 136 0 14 chr5 94040821 94041115 -105589035 + AluSx SINE Alu 1 290 -22 527 243 35 80 chr5 94041503 94041729 -105588421 - MIR SINE MIR 0 262 47 3346 51 53 2 chr5 94041756 94042205 -105587945 + L1PB1 LINE L1 5565 6036 -115 881 41 0 32 chr5 94042203 94042326 -105587824 - L1PA6 LINE L1 -991 5155 5037 * 7035 58 1 3 chr5 94042326 94043312 -105586838 + L1PA6 LINE L1 5157 6143 -11 888 104 8 8 chr5 94043322 94043456 -105586694 + L1PB1 LINE L1 6018 6151 0 294 315 0 3 chr5 94043585 94043731 -105586419 - L1MA10 LINE L1 -1 6333 6033 2100 135 46 0 chr5 94043867 94044192 -105585958 + THE1C LTR MaLR 1 340 -35 6691 58 3 49 chr5 94044196 94046104 -105584046 - SVA Other Other -799 1384 1 204 67 0 0 chr5 94046104 94046134 -105584016 + (GGGAGA)n Simple_repeat Simple_repeat 2 31 0 241 158 0 0 chr5 94046134 94046172 -105583978 + THE1C LTR MaLR 387 424 -4 210 150 33 17 chr5 94046967 94047027 -105583123 + GA-rich Low_complexity Low_complexity 3 63 0 326 229 12 24 chr5 94047443 94047526 -105582624 + L2 LINE L2 3232 3313 0 29 0 0 0 chr5 94048522 94048551 -105581599 + AT_rich Low_complexity Low_complexity 1 29 0 4471 63 2 2 chr5 94049422 94049994 -105580156 - L1PA6 LINE L1 -4 6150 5579 2284 92 3 3 chr5 94050218 94050513 -105579637 + AluSp SINE Alu 1 295 -18 253 239 14 134 chr5 94050825 94050967 -105579183 - MIR SINE MIR -73 189 65 2699 161 19 2 chr5 94051575 94052046 -105578104 + L1MC3 LINE L1 7150 7628 -157 323 285 15 36 chr5 94052794 94052931 -105577219 - MIR SINE MIR -80 182 49 220 220 0 0 chr5 94054065 94054115 -105576035 + T-rich Low_complexity Low_complexity 1 50 0 663 244 22 49 chr5 94054297 94054522 -105575628 - Charlie8 DNA MER1_type -2161 256 38 2302 75 0 0 chr5 94055418 94055700 -105574450 + AluSc SINE Alu 24 305 -4 900 241 23 19 chr5 94055893 94056158 -105573992 - LTR37B LTR ERV1 -5 463 198 285 296 30 37 chr5 94056608 94056743 -105573407 - L2 LINE L2 -5 3308 3175 923 268 20 30 chr5 94056997 94057292 -105572858 - HAL1 LINE L1 -634 1873 1582 2798 275 80 70 chr5 94057329 94059122 -105571028 + HAL1 LINE L1 71 1880 -627 35 71 0 0 chr5 94059552 94059622 -105570528 + AT_rich Low_complexity Low_complexity 1 70 0 491 253 121 11 chr5 94060997 94061171 -105568979 - MLT1K LTR MaLR -22 566 374 601 282 80 33 chr5 94062708 94062921 -105567229 + MIR SINE MIR 2 224 -38 596 285 50 22 chr5 94063140 94063319 -105566831 + MER5A DNA MER1_type 1 184 -5 2670 122 30 92 chr5 94066829 94067395 -105562755 - L1MA4 LINE L1 0 6300 5770 2299 105 0 0 chr5 94067562 94067866 -105562284 - AluSg SINE Alu -6 304 1 38 39 0 0 chr5 94069278 94069330 -105560820 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 94069484 94069505 -105560645 + AT_rich Low_complexity Low_complexity 1 21 0 7601 20 8 0 chr5 94069855 94071087 -105559063 - L1PA4 LINE L1 0 6155 4924 213 217 0 0 chr5 94072055 94072101 -105558049 + (ATG)n Simple_repeat Simple_repeat 2 47 0 381 295 36 0 chr5 94072101 94072240 -105557910 - MIR SINE MIR 0 262 119 234 222 0 0 chr5 94072508 94072562 -105557588 + Charlie8 DNA MER1_type 2360 2413 -4 237 325 38 38 chr5 94072596 94072676 -105557474 - MIR3 SINE MIR -123 85 6 2249 104 7 0 chr5 94072991 94073300 -105556850 - AluSx SINE Alu -1 311 1 1677 184 0 4 chr5 94073664 94073967 -105556183 - AluJb SINE Alu 0 307 6 803 240 61 55 chr5 94074309 94074804 -105555346 + L1M4 LINE L1 2908 3405 -2741 2563 187 50 14 chr5 94074820 94075317 -105554833 - MER21B LTR ERV1 -11 852 338 7186 98 0 9 chr5 94075418 94076463 -105553687 + L1P LINE L1 969 2004 -4142 342 213 24 49 chr5 94076563 94076707 -105553443 + L1M4 LINE L1 1537 1780 -4864 1697 177 58 0 chr5 94076707 94077001 -105553149 + AluSx SINE Alu 1 311 -1 342 213 24 49 chr5 94077001 94077018 -105553132 + L1M4 LINE L1 1780 1796 -4848 1978 245 28 48 chr5 94077168 94077330 -105552820 + L1M2b LINE L1 15 179 -7030 2188 149 68 24 chr5 94077330 94077740 -105552410 - MSTA LTR MaLR 0 428 1 1978 245 28 48 chr5 94077740 94078218 -105551932 + L1M2b LINE L1 179 642 -6567 523 308 129 13 chr5 94078825 94079049 -105551101 + MIR SINE MIR 2 251 -11 610 238 64 12 chr5 94080975 94081147 -105549003 + MIR SINE MIR 81 261 -1 1615 185 7 13 chr5 94082271 94082573 -105547577 + AluJb SINE Alu 1 300 -12 23 0 0 0 chr5 94084049 94084072 -105546078 + AT_rich Low_complexity Low_complexity 1 23 0 180 125 0 0 chr5 94084526 94084558 -105545592 + (TA)n Simple_repeat Simple_repeat 2 33 0 486 271 98 30 chr5 94086893 94087188 -105542962 + HAL1 LINE L1 1406 1720 -787 27 0 0 0 chr5 94087863 94087890 -105542260 + AT_rich Low_complexity Low_complexity 1 27 0 1433 199 52 3 chr5 94088562 94088734 -105541416 - AluJo SINE Alu -10 302 109 351 0 0 0 chr5 94088734 94088773 -105541377 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1433 199 52 3 chr5 94088773 94088887 -105541263 - AluJo SINE Alu -203 109 2 405 0 0 0 chr5 94089031 94089076 -105541074 + (TG)n Simple_repeat Simple_repeat 2 46 0 180 200 0 0 chr5 94090361 94090406 -105539744 + T-rich Low_complexity Low_complexity 1 45 0 327 85 0 0 chr5 94091395 94091442 -105538708 + (CA)n Simple_repeat Simple_repeat 2 48 0 21 36 0 0 chr5 94092745 94092773 -105537377 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 94094651 94094672 -105535478 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr5 94097238 94097266 -105532884 + AT_rich Low_complexity Low_complexity 1 28 0 237 260 0 0 chr5 94098462 94098539 -105531611 + (TA)n Simple_repeat Simple_repeat 1 77 0 2355 100 0 0 chr5 94099086 94099395 -105530755 - AluSc SINE Alu 0 309 1 383 146 12 37 chr5 94100726 94100808 -105529342 - L1MC4 LINE L1 -140 7902 7823 267 330 0 0 chr5 94100965 94101065 -105529085 + CT-rich Low_complexity Low_complexity 3 102 0 2153 79 11 0 chr5 94101343 94101609 -105528541 - AluSc SINE Alu -24 285 17 2137 124 0 0 chr5 94101814 94102112 -105528038 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 94102166 94102187 -105527963 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr5 94102193 94102217 -105527933 + (GA)n Simple_repeat Simple_repeat 1 24 0 236 313 0 0 chr5 94102541 94102605 -105527545 - L1ME LINE L1 -496 5625 5562 23 54 0 0 chr5 94102683 94102720 -105527430 + AT_rich Low_complexity Low_complexity 1 37 0 237 108 0 0 chr5 94103029 94103066 -105527084 + (TG)n Simple_repeat Simple_repeat 2 38 0 350 296 78 7 chr5 94103101 94103243 -105526907 - L2 LINE L2 -159 3113 2962 21 57 0 0 chr5 94106320 94106355 -105523795 + AT_rich Low_complexity Low_complexity 1 35 0 1833 265 36 36 chr5 94107376 94108006 -105522144 - L1ME3A LINE L1 -20 6150 5521 306 173 7 194 chr5 94108088 94108227 -105521923 - L1ME4a LINE L1 -16 6105 5993 249 240 124 39 chr5 94108279 94108408 -105521742 - L1ME4a LINE L1 0 6121 5982 1145 201 10 99 chr5 94109453 94109767 -105520383 + AluJo SINE Alu 1 286 -16 22 35 0 0 chr5 94109771 94109800 -105520350 + AT_rich Low_complexity Low_complexity 1 29 0 186 133 0 0 chr5 94109897 94109927 -105520223 + (TG)n Simple_repeat Simple_repeat 2 31 0 181 365 75 0 chr5 94110671 94110778 -105519372 - L2 LINE L2 -1 3312 3198 23 54 0 0 chr5 94110978 94111015 -105519135 + AT_rich Low_complexity Low_complexity 1 37 0 3002 178 68 31 chr5 94111704 94112074 -105518076 + Charlie1 DNA MER1_type 2027 2382 -379 2348 84 10 0 chr5 94112074 94112382 -105517768 + AluY SINE Alu 1 311 0 3002 178 68 31 chr5 94112382 94112720 -105517430 + Charlie1 DNA MER1_type 2382 2761 0 827 117 0 0 chr5 94112911 94113022 -105517128 + FLAM_C SINE Alu 1 111 -32 32 26 0 0 chr5 94113028 94113067 -105517083 + AT_rich Low_complexity Low_complexity 1 39 0 195 254 0 18 chr5 94113260 94113315 -105516835 + L2 LINE L2 3219 3272 0 2509 59 0 13 chr5 94114511 94114816 -105515334 - AluY SINE Alu -10 301 1 42499 37 22 1 chr5 94114934 94120961 -105509189 - L1PA3 LINE L1 0 6155 1 207 182 0 121 chr5 94121604 94121670 -105508480 + L2 LINE L2 2085 2142 -1172 209 206 151 0 chr5 94122246 94122319 -105507831 + L2 LINE L2 2139 2222 -1092 491 282 55 50 chr5 94122336 94122538 -105507612 + L2 LINE L2 2192 2394 -920 447 287 61 22 chr5 94122645 94122826 -105507324 + ERVL LTR ERVL 3756 3943 -1711 584 264 28 24 chr5 94122916 94123100 -105507050 + ERVL LTR ERVL 4083 4313 -1401 782 330 62 26 chr5 94123139 94123608 -105506542 + ERVL LTR ERVL 4377 4862 -902 204 391 97 39 chr5 94124403 94124610 -105505540 + L2 LINE L2 3036 3254 -18 1746 172 53 25 chr5 94125790 94126145 -105504005 - MLT1A1 LTR MaLR 0 365 1 1534 150 89 14 chr5 94127861 94128174 -105501976 + AluJo SINE Alu 12 345 0 481 229 192 21 chr5 94129165 94129405 -105500745 + MER46C DNA MER2_type 2 282 -56 21 0 0 0 chr5 94129468 94129489 -105500661 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 94130753 94130788 -105499362 + AT_rich Low_complexity Low_complexity 1 35 0 311 301 66 44 chr5 94130790 94130814 -105499336 - MIR SINE MIR -65 197 175 1996 201 8 5 chr5 94130814 94131207 -105498943 - MSTD LTR MaLR -2 394 1 311 301 66 44 chr5 94131207 94131318 -105498832 - MIR SINE MIR -87 175 59 21 71 0 0 chr5 94131534 94131576 -105498574 + AT_rich Low_complexity Low_complexity 1 42 0 241 224 212 0 chr5 94132018 94132103 -105498047 - MIR SINE MIR 0 262 160 1940 120 3 21 chr5 94132415 94132706 -105497444 + AluSx SINE Alu 25 310 -2 360 152 0 0 chr5 94134124 94134190 -105495960 + CT-rich Low_complexity Low_complexity 1 66 0 2165 78 11 0 chr5 94134190 94134461 -105495689 - AluSp SINE Alu -11 302 29 602 274 82 57 chr5 94134461 94134778 -105495372 - MLT1I LTR MaLR -73 336 12 959 176 0 12 chr5 94135533 94135698 -105494452 - FRAM SINE Alu -13 163 1 21 57 0 0 chr5 94136578 94136613 -105493537 + AT_rich Low_complexity Low_complexity 1 35 0 1292 185 122 25 chr5 94136825 94137144 -105493006 - MLT1A1 LTR MaLR -15 350 1 384 261 72 0 chr5 94137492 94137603 -105492547 + L2 LINE L2 3187 3305 -8 1837 117 0 8 chr5 94137624 94137881 -105492269 + AluSx SINE Alu 1 255 -57 419 0 0 19 chr5 94137921 94137973 -105492177 + (TAAA)n Simple_repeat Simple_repeat 4 54 0 22 0 0 0 chr5 94138518 94138540 -105491610 + AT_rich Low_complexity Low_complexity 1 22 0 7574 28 8 0 chr5 94138540 94139769 -105490381 - L1PA3 LINE L1 -3 6152 4920 7630 27 6 0 chr5 94139769 94140672 -105489478 + L1PA3 LINE L1 4037 4944 -1202 1887 89 8 8 chr5 94140680 94140948 -105489202 - AluSc SINE Alu 0 298 31 207 0 0 0 chr5 94141656 94141679 -105488471 + (T)n Simple_repeat Simple_repeat 1 23 0 508 350 86 6 chr5 94142609 94142923 -105487227 + MER102b DNA MER1_type 2 340 -1 213 121 0 0 chr5 94143634 94143667 -105486483 + (TA)n Simple_repeat Simple_repeat 2 34 0 2293 117 0 0 chr5 94143701 94144008 -105486142 - AluSq SINE Alu -6 307 1 237 65 0 0 chr5 94144092 94144123 -105486027 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 1342 160 147 39 chr5 94145547 94145854 -105484296 + MER2 DNA MER2_type 6 345 0 28 29 0 0 chr5 94148036 94148071 -105482079 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 94149089 94149114 -105481036 + AT_rich Low_complexity Low_complexity 1 25 0 554 251 63 31 chr5 94149672 94149863 -105480287 + MIR SINE MIR 59 255 -7 249 272 29 58 chr5 94150214 94150336 -105479814 - MIR SINE MIR -28 180 54 385 302 151 19 chr5 94150575 94150787 -105479363 - MIR SINE MIR 0 262 23 456 187 6 111 chr5 94151490 94151661 -105478489 + MER5C DNA MER1_type 172 324 0 228 163 0 0 chr5 94153898 94153941 -105476209 + (TG)n Simple_repeat Simple_repeat 2 44 0 187 333 0 77 chr5 94156287 94156404 -105473746 + L2 LINE L2 2567 2674 -640 21 0 0 0 chr5 94156564 94156585 -105473565 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 94156821 94156842 -105473308 + AT_rich Low_complexity Low_complexity 1 21 0 2276 90 3 0 chr5 94157142 94157431 -105472719 - AluSc SINE Alu -19 290 1 700 282 55 32 chr5 94158225 94158445 -105471705 - MLT1H LTR MaLR -302 247 23 629 163 32 0 chr5 94158766 94158889 -105471261 - L1PA7 LINE L1 -5 6149 6023 180 0 0 0 chr5 94159191 94159211 -105470939 + (TTG)n Simple_repeat Simple_repeat 2 21 0 190 383 28 28 chr5 94160585 94160726 -105469424 - MIR SINE MIR -38 224 84 30 77 0 0 chr5 94160858 94160923 -105469227 + AT_rich Low_complexity Low_complexity 1 65 0 452 297 31 8 chr5 94162259 94162387 -105467763 - MIR SINE MIR -112 150 20 1759 103 23 60 chr5 94164110 94164411 -105465739 - AluSx SINE Alu -22 290 1 21 0 0 0 chr5 94165486 94165507 -105464643 + AT_rich Low_complexity Low_complexity 1 21 0 270 364 49 11 chr5 94165807 94165991 -105464159 - MLT1K LTR MaLR -24 564 374 330 247 48 96 chr5 94166424 94166590 -105463560 - L1MC/D LINE L1 -807 5552 5395 231 200 127 36 chr5 94166663 94166773 -105463377 - L1MC/D LINE L1 -852 5294 5175 33 25 0 0 chr5 94166773 94166813 -105463337 + AT_rich Low_complexity Low_complexity 1 40 0 594 283 82 44 chr5 94167114 94167429 -105462721 - L1MC/D LINE L1 -1332 4814 4488 755 313 58 35 chr5 94167436 94167832 -105462318 - LTR16C LTR ERVL 0 491 87 635 271 72 9 chr5 94168010 94168231 -105461919 + MIR SINE MIR 1 235 -27 550 284 91 35 chr5 94168335 94168677 -105461473 - L1MC/D LINE L1 -1898 4248 3888 766 32 0 0 chr5 94169632 94169725 -105460425 + L1PA5 LINE L1 6059 6151 -3 755 127 0 0 chr5 94169755 94169865 -105460285 - AluSg/x SINE Alu -9 300 191 1974 68 0 38 chr5 94169865 94170128 -105460022 - AluY SINE Alu -58 253 1 909 161 0 7 chr5 94170131 94170274 -105459876 - AluSq/x SINE Alu -171 142 1 2118 182 55 2 chr5 94170292 94170748 -105459402 - L1MB4 LINE L1 0 6180 5701 189 0 0 0 chr5 94170755 94170776 -105459374 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 31 44 0 0 chr5 94171017 94171062 -105459088 + AT_rich Low_complexity Low_complexity 1 45 0 1578 209 75 50 chr5 94171260 94171379 -105458771 - L1ME3 LINE L1 -1 6161 6046 1608 143 64 0 chr5 94171379 94171690 -105458460 + AluSx SINE Alu 1 328 0 1578 209 75 50 chr5 94171690 94172009 -105458141 - L1ME3 LINE L1 -116 6046 5711 30 27 0 0 chr5 94172940 94172977 -105457173 + AT_rich Low_complexity Low_complexity 1 37 0 2213 71 0 0 chr5 94173559 94173916 -105456234 + AluY SINE Alu 14 370 0 1054 313 92 47 chr5 94174486 94174752 -105455398 - L2 LINE L2 -784 2530 2277 2422 63 0 16 chr5 94174752 94175070 -105455080 + AluSp SINE Alu 1 313 0 1054 313 92 47 chr5 94175070 94175732 -105454418 - L2 LINE L2 -1037 2277 1561 23 86 0 0 chr5 94176414 94176472 -105453678 + AT_rich Low_complexity Low_complexity 1 58 0 2023 122 3 0 chr5 94176566 94176852 -105453298 - AluSx SINE Alu -25 287 1 26 0 0 0 chr5 94176930 94176956 -105453194 + AT_rich Low_complexity Low_complexity 1 26 0 1622 317 160 20 chr5 94178235 94178974 -105451176 + L2 LINE L2 1167 1801 -1513 276 30 0 0 chr5 94178974 94179007 -105451143 + (TG)n Simple_repeat Simple_repeat 1 33 0 1622 317 160 20 chr5 94179007 94179418 -105450732 + L2 LINE L2 1801 2478 -836 1167 170 10 5 chr5 94179429 94179635 -105450515 - AluJb SINE Alu -30 282 76 558 364 116 24 chr5 94179636 94179944 -105450206 + L2 LINE L2 2467 2832 -482 576 208 31 0 chr5 94179944 94180074 -105450076 - MER94 DNA DNA 0 134 1 558 364 116 24 chr5 94180074 94180221 -105449929 + L2 LINE L2 2832 2964 -350 191 295 221 0 chr5 94180309 94180404 -105449746 + L2 LINE L2 3155 3270 -43 2102 80 35 3 chr5 94182194 94182480 -105447670 - AluY SINE Alu -16 295 1 24 0 0 0 chr5 94182710 94182734 -105447416 + AT_rich Low_complexity Low_complexity 1 24 0 1908 158 124 16 chr5 94183386 94183772 -105446378 - MSTA LTR MaLR 0 428 1 936 184 52 175 chr5 94184099 94184334 -105445816 - Charlie1b DNA MER1_type -2328 433 171 1160 246 32 18 chr5 94184334 94184618 -105445532 - AluJo SINE Alu -13 289 2 936 184 52 175 chr5 94184618 94184640 -105445510 - Charlie1b DNA MER1_type -2590 171 148 2013 159 48 2 chr5 94184640 94185037 -105445113 - L1MA9 LINE L1 0 6312 5898 936 184 52 175 chr5 94185037 94185257 -105444893 - Charlie1b DNA MER1_type -2613 148 14 185 317 58 19 chr5 94185264 94185368 -105444782 - L2 LINE L2 -550 2764 2657 13670 211 54 24 chr5 94185978 94186905 -105443245 - L1MA7 LINE L1 -2 6493 5595 2010 87 94 0 chr5 94186905 94187181 -105442969 - AluSg SINE Alu -8 302 1 13670 211 54 24 chr5 94187181 94192079 -105438071 - L1MA7 LINE L1 -900 5595 827 1619 282 65 26 chr5 94192782 94193402 -105436748 - L1MA7 LINE L1 -5637 644 1 402 349 58 82 chr5 94194376 94194803 -105435347 - L2 LINE L2 -10 3262 2846 407 260 135 50 chr5 94194973 94195416 -105434734 - L2 LINE L2 -626 2688 2208 2358 87 0 0 chr5 94195795 94196094 -105434056 - AluY SINE Alu -12 299 1 1595 187 26 0 chr5 94196332 94196605 -105433545 - AluJo SINE Alu -32 280 1 23 0 0 0 chr5 94196766 94196789 -105433361 + AT_rich Low_complexity Low_complexity 1 23 0 214 263 0 18 chr5 94198535 94198592 -105431558 + GA-rich Low_complexity Low_complexity 2 57 0 258 243 68 0 chr5 94199058 94199132 -105431018 - MLT1L LTR MaLR -339 276 198 985 273 101 43 chr5 94199144 94199655 -105430495 - L2 LINE L2 0 3313 2771 2730 180 29 16 chr5 94199655 94200210 -105429940 - MER68 LTR ERV1 0 562 1 985 273 101 43 chr5 94200210 94200400 -105429750 - L2 LINE L2 -542 2771 2593 340 240 83 25 chr5 94200400 94200521 -105429629 - L2 LINE L2 -876 2438 2311 1259 184 65 10 chr5 94200595 94200889 -105429261 - MER33 DNA MER1_type 0 324 15 595 268 121 26 chr5 94200979 94201251 -105428899 + L2 LINE L2 2991 3288 -25 203 295 248 0 chr5 94202421 94202526 -105427624 - MIR SINE MIR -61 147 17 284 161 0 0 chr5 94202568 94202624 -105427526 - L1ME4a LINE L1 -5 6116 6061 554 326 128 8 chr5 94203429 94203812 -105426338 - LTR16A LTR ERVL 0 450 22 705 152 69 164 chr5 94204362 94204593 -105425557 - MER58A DNA MER1_type -15 209 1 2751 66 0 3 chr5 94204616 94204978 -105425172 - L1PA13 LINE L1 0 6163 5803 1211 109 0 0 chr5 94204978 94205153 -105424997 + L1PA13 LINE L1 5598 5772 -396 209 194 0 0 chr5 94207985 94208021 -105422129 + GA-rich Low_complexity Low_complexity 1 36 0 299 208 33 17 chr5 94208077 94208197 -105421953 + (TATAA)n Simple_repeat Simple_repeat 2 123 0 22 0 0 0 chr5 94208359 94208381 -105421769 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 94208518 94208540 -105421610 + AT_rich Low_complexity Low_complexity 1 22 0 2203 68 0 4 chr5 94210397 94210678 -105419472 + AluY SINE Alu 24 303 -8 213 258 0 0 chr5 94211660 94211726 -105418424 + CT-rich Low_complexity Low_complexity 3 68 0 2260 104 0 3 chr5 94212007 94212316 -105417834 + AluSc SINE Alu 1 308 -1 2391 84 0 10 chr5 94212316 94212626 -105417524 + AluSg SINE Alu 1 307 -3 750 310 69 35 chr5 94215068 94215500 -105414650 - MLT1J2 LTR MaLR 0 450 1 2745 159 4 0 chr5 94215842 94216296 -105413854 - L1PA16 LINE L1 -1 6165 5710 255 320 41 0 chr5 94216759 94216881 -105413269 - L1PBb LINE L1 -5956 893 767 331 344 122 54 chr5 94217013 94217553 -105412597 - L1PBb LINE L1 -6259 590 14 378 0 0 0 chr5 94217753 94217795 -105412355 + (CA)n Simple_repeat Simple_repeat 1 42 0 788 162 97 0 chr5 94217830 94218015 -105412135 - L1MA4 LINE L1 -6 6294 6092 964 190 5 31 chr5 94218017 94218212 -105411938 - AluJb SINE Alu -3 309 120 32 0 0 0 chr5 94218212 94218244 -105411906 + AT_rich Low_complexity Low_complexity 1 32 0 2358 60 3 3 chr5 94218245 94218529 -105411621 - AluY SINE Alu -24 287 4 189 384 73 12 chr5 94218561 94218725 -105411425 + L2 LINE L2 2358 2531 -783 285 286 44 16 chr5 94219388 94219570 -105410580 + L1M4 LINE L1 4630 4816 -1330 745 334 40 3 chr5 94221106 94221453 -105408697 - LTR16A LTR ERVL 0 450 91 260 243 0 0 chr5 94221616 94221686 -105408464 + LTR16A LTR ERVL 317 386 -64 23 33 0 0 chr5 94221997 94222027 -105408123 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 94222067 94222100 -105408050 + AT_rich Low_complexity Low_complexity 1 33 0 2482 96 8 6 chr5 94222372 94222728 -105407422 - THE1B LTR MaLR -1 363 7 243 0 0 0 chr5 94223013 94223040 -105407110 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 333 339 72 28 chr5 94223607 94223787 -105406363 + MIR SINE MIR 20 207 -55 235 291 45 18 chr5 94224113 94224223 -105405927 + MER103 DNA DNA 3 115 -51 1754 240 22 5 chr5 94224470 94224879 -105405271 - MER82 DNA MER2_type -1 652 237 467 259 61 0 chr5 94224900 94225031 -105405119 + MER82 DNA MER2_type 508 646 -7 2134 120 0 7 chr5 94225216 94225508 -105404642 + AluSx SINE Alu 9 298 -14 25 0 0 0 chr5 94226777 94226802 -105403348 + AT_rich Low_complexity Low_complexity 1 25 0 1768 168 3 7 chr5 94227811 94228096 -105402054 - AluJo SINE Alu -23 289 6 419 270 26 85 chr5 94228545 94228734 -105401416 + MIR SINE MIR 66 243 -19 2071 137 153 5 chr5 94229324 94229697 -105400453 - MSTA LTR MaLR 0 428 1 228 200 0 0 chr5 94230414 94230469 -105399681 + (TG)n Simple_repeat Simple_repeat 1 55 0 221 0 35 0 chr5 94230527 94230556 -105399594 + (TG)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr5 94231592 94231620 -105398530 + AT_rich Low_complexity Low_complexity 1 28 0 1040 217 21 46 chr5 94233016 94233256 -105396894 - AluJo SINE Alu 0 312 79 21 0 0 0 chr5 94234774 94234795 -105395355 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 94234831 94234852 -105395298 + AT_rich Low_complexity Low_complexity 1 21 0 1265 312 102 46 chr5 94236618 94237070 -105393080 - L2 LINE L2 0 3313 2888 7138 52 7 0 chr5 94237070 94238734 -105391416 + L1PA6 LINE L1 4468 6152 -2 1265 312 102 46 chr5 94238734 94239514 -105390636 - L2 LINE L2 -425 2888 1950 2496 77 6 3 chr5 94239902 94240214 -105389936 - AluSq SINE Alu 0 313 1 2319 200 17 9 chr5 94241125 94241165 -105388985 - MLT2C2 LTR ERVL 0 464 426 393 95 0 0 chr5 94241165 94241228 -105388922 + (CA)n Simple_repeat Simple_repeat 2 64 0 2319 200 17 9 chr5 94241228 94241647 -105388503 - MLT2C2 LTR ERVL -38 426 1 456 149 180 37 chr5 94244257 94244418 -105385732 - MER105 DNA DNA -20 184 1 3283 160 25 8 chr5 94244832 94245427 -105384723 - MER6A DNA MER2_type 0 605 1 317 304 62 18 chr5 94246785 94246897 -105383253 - L2 LINE L2 -18 3254 3138 30108 104 19 56 chr5 94247013 94253404 -105376746 + L1PA7 LINE L1 12 6152 -2 1980 109 3 85 chr5 94254514 94254854 -105375296 - AluSx SINE Alu 0 312 1 21 0 0 0 chr5 94255354 94255375 -105374775 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 94255452 94255482 -105374668 + AT_rich Low_complexity Low_complexity 1 30 0 189 171 0 0 chr5 94256315 94256350 -105373800 + (TG)n Simple_repeat Simple_repeat 1 35 0 1937 175 3 0 chr5 94256444 94256752 -105373398 + AluSx SINE Alu 1 309 -3 219 280 0 53 chr5 94257152 94257227 -105372923 - MIR3 SINE MIR -13 195 125 21 36 0 0 chr5 94257423 94257451 -105372699 + AT_rich Low_complexity Low_complexity 1 28 0 2243 103 6 6 chr5 94259163 94259474 -105370676 - AluSx SINE Alu -1 311 1 311 259 25 0 chr5 94259518 94259599 -105370551 - L1MC4 LINE L1 -143 7899 7817 513 234 57 8 chr5 94260612 94260736 -105369414 + MIR SINE MIR 21 150 -112 1535 142 0 4 chr5 94260936 94261161 -105368989 + AluSx SINE Alu 1 224 -88 2256 69 0 33 chr5 94261317 94261620 -105368530 - AluY SINE Alu -16 295 3 549 300 90 14 chr5 94261633 94261660 -105368490 - MIR SINE MIR -21 241 217 450 0 0 0 chr5 94261660 94261710 -105368440 + (CA)n Simple_repeat Simple_repeat 2 51 0 549 300 90 14 chr5 94261710 94261905 -105368245 - MIR SINE MIR -45 217 2 242 280 119 34 chr5 94263998 94264116 -105366034 - L3b LINE CR1 -86 1497 1370 22 0 0 0 chr5 94264223 94264245 -105365905 + AT_rich Low_complexity Low_complexity 1 22 0 2266 88 7 3 chr5 94264311 94264608 -105365542 - AluSg SINE Alu -12 298 1 988 179 17 8 chr5 94264718 94264958 -105365192 - L1MA7 LINE L1 0 6291 6050 21 36 0 0 chr5 94265201 94265229 -105364921 + AT_rich Low_complexity Low_complexity 1 28 0 2556 64 0 6 chr5 94265232 94265545 -105364605 + AluY SINE Alu 1 311 0 1987 154 44 11 chr5 94266820 94267183 -105362967 + THE1C LTR MaLR 1 375 0 540 316 67 9 chr5 94267558 94267783 -105362367 - L2 LINE L2 -1 3312 3075 49 43 0 0 chr5 94268731 94268801 -105361349 + AT_rich Low_complexity Low_complexity 1 70 0 42588 37 21 1 chr5 94268801 94274830 -105355320 - L1PA4 LINE L1 -3 6152 1 5704 36 0 0 chr5 94274830 94275517 -105354633 - L1P LINE L1 -1307 4839 4153 22 0 0 0 chr5 94276419 94276441 -105353709 + AT_rich Low_complexity Low_complexity 1 22 0 227 345 20 14 chr5 94276566 94276714 -105353436 - L1MC4 LINE L1 -1040 7002 6854 647 180 78 63 chr5 94277035 94277241 -105352909 - MER6B DNA MER2_type -1 209 1 2068 148 0 0 chr5 94277321 94277624 -105352526 - AluSx SINE Alu -9 303 1 398 347 119 0 chr5 94278789 94279008 -105351142 + MIR SINE MIR 18 262 0 216 275 188 0 chr5 94279260 94279340 -105350810 - MIR SINE MIR -95 113 19 32 67 0 0 chr5 94280643 94280703 -105349447 + AT_rich Low_complexity Low_complexity 1 60 0 371 379 38 5 chr5 94280875 94281086 -105349064 - L1ME3 LINE L1 -213 5949 5732 1454 244 62 66 chr5 94283108 94283621 -105346529 + MLT2B3 LTR ERVL 5 515 -39 327 213 0 0 chr5 94283634 94283714 -105346436 + (CA)n Simple_repeat Simple_repeat 2 81 0 6880 121 14 27 chr5 94283807 94285627 -105344523 - L1MA3 LINE L1 0 7724 5928 5373 141 118 13 chr5 94285759 94286884 -105343266 - L1MA3 LINE L1 -4699 2866 1624 1730 183 43 8 chr5 94286886 94287280 -105342870 + L1MD1 LINE L1 1680 2087 -4453 4566 176 32 3 chr5 94287281 94288146 -105342004 + L1MD1 LINE L1 5739 6628 -8 1815 134 4 0 chr5 94288698 94288967 -105341183 - AluSx SINE Alu -2 310 41 390 278 88 15 chr5 94289318 94289523 -105340627 - L1ME3A LINE L1 -219 5951 5732 1259 297 106 60 chr5 94289598 94290095 -105340055 + L2 LINE L2 1968 2441 -872 524 196 116 9 chr5 94290095 94290207 -105339943 + FLAM_A SINE Alu 1 124 -9 1259 297 106 60 chr5 94290207 94290541 -105339609 + L2 LINE L2 2441 2758 -555 2188 129 0 0 chr5 94290541 94290851 -105339299 - AluY SINE Alu -1 310 1 1259 297 106 60 chr5 94290851 94291276 -105338874 + L2 LINE L2 2758 3291 -22 231 292 14 28 chr5 94292653 94292725 -105337425 + MIR3 SINE MIR 113 183 -25 29 60 0 0 chr5 94293737 94293787 -105336363 + AT_rich Low_complexity Low_complexity 1 50 0 2015 82 11 32 chr5 94293787 94294066 -105336084 + AluSx SINE Alu 21 293 -19 22 35 0 0 chr5 94294266 94294295 -105335855 + AT_rich Low_complexity Low_complexity 1 29 0 606 299 52 55 chr5 94294345 94295091 -105335059 + L1M4 LINE L1 4491 5234 -912 777 179 33 11 chr5 94295301 94295485 -105334665 + MER53 DNA DNA 2 189 0 331 261 126 0 chr5 94296563 94296674 -105333476 + MIR SINE MIR 93 217 -45 363 331 61 39 chr5 94296696 94297007 -105333143 - L1MCa LINE L1 -4708 1718 1401 1617 81 0 5 chr5 94297791 94298013 -105332137 - pTR5 LTR ERV1 -2046 392 172 305 245 31 20 chr5 94298016 94298114 -105332036 - LTR30 LTR ERV1 -80 642 544 7837 99 57 28 chr5 94298114 94299371 -105330779 - pTR5 LTR ERV1 -413 2025 733 27 49 0 0 chr5 94299916 94299957 -105330193 + AT_rich Low_complexity Low_complexity 1 41 0 1809 176 0 0 chr5 94300739 94301028 -105329122 - AluSq SINE Alu -24 289 1 388 317 21 7 chr5 94301313 94301455 -105328695 - MIR SINE MIR -96 166 23 267 288 0 0 chr5 94302169 94302235 -105327915 + L2 LINE L2 3225 3290 -23 263 194 30 30 chr5 94302331 94302398 -105327752 - L2 LINE L2 -310 2962 2896 423 0 0 0 chr5 94302441 94302488 -105327662 + (TG)n Simple_repeat Simple_repeat 1 47 0 414 0 0 0 chr5 94302487 94302533 -105327617 + (GA)n Simple_repeat Simple_repeat 1 46 0 * 184 348 0 45 chr5 94302943 94303032 -105327118 - L2 LINE L2 -2050 1264 1180 387 287 7 93 chr5 94303877 94304027 -105326123 - MER5A DNA MER1_type -18 171 35 356 274 18 92 chr5 94303882 94304046 -105326104 + MER5A DNA MER1_type 35 186 -3 * 21 0 0 0 chr5 94305569 94305590 -105324560 + AT_rich Low_complexity Low_complexity 1 21 0 240 174 275 0 chr5 94307411 94307480 -105322670 - L2 LINE L2 0 3313 3226 628 324 0 6 chr5 94308025 94308195 -105321955 + MIR SINE MIR 4 172 -90 23 78 0 0 chr5 94308391 94308442 -105321708 + AT_rich Low_complexity Low_complexity 1 51 0 1035 170 0 0 chr5 94309858 94310011 -105320139 - AluJo SINE Alu -159 153 1 393 313 153 25 chr5 94310091 94310366 -105319784 - MLT1L LTR MaLR -112 503 194 550 222 0 19 chr5 94310527 94310635 -105319515 - FLAM_C SINE Alu -32 111 6 208 255 21 0 chr5 94310636 94310683 -105319467 + L2 LINE L2 3266 3313 0 1040 123 43 0 chr5 94310797 94310959 -105319191 - AluSg/x SINE Alu -13 299 131 643 197 25 163 chr5 94311018 94311185 -105318965 + MER3 DNA MER1_type 1 127 -82 1597 119 90 54 chr5 94311185 94311463 -105318687 + AluJo SINE Alu 1 288 -24 643 197 25 163 chr5 94311463 94311534 -105318616 + MER3 DNA MER1_type 127 206 -3 1501 79 5 0 chr5 94311671 94311860 -105318290 - AluSq SINE Alu -19 294 105 403 112 0 101 chr5 94311980 94312069 -105318081 - MADE1 DNA Mariner 0 80 1 29 0 0 0 chr5 94312637 94312666 -105317484 + AT_rich Low_complexity Low_complexity 1 29 0 2276 99 0 0 chr5 94312669 94312973 -105317177 - AluY SINE Alu -7 304 1 294 194 0 0 chr5 94313720 94313787 -105316363 + (CA)n Simple_repeat Simple_repeat 1 67 0 23 54 0 0 chr5 94315501 94315538 -105314612 + AT_rich Low_complexity Low_complexity 1 37 0 205 268 36 0 chr5 94315937 94315993 -105314157 - L2 LINE L2 -257 3056 2999 28 29 0 0 chr5 94316131 94316166 -105313984 + AT_rich Low_complexity Low_complexity 1 35 0 287 272 68 0 chr5 94316191 94316294 -105313856 + L1ME3A LINE L1 6027 6136 -34 399 41 0 0 chr5 94317663 94317712 -105312438 + (TG)n Simple_repeat Simple_repeat 2 50 0 189 214 0 0 chr5 94319550 94319592 -105310558 + (TTG)n Simple_repeat Simple_repeat 2 43 0 692 231 39 0 chr5 94321134 94321290 -105308860 - MIR SINE MIR -94 168 7 529 322 99 13 chr5 94321572 94321805 -105308345 - MIR SINE MIR -4 258 6 22 0 0 0 chr5 94322634 94322656 -105307494 + AT_rich Low_complexity Low_complexity 1 22 0 243 0 0 0 chr5 94323791 94323818 -105306332 + (TG)n Simple_repeat Simple_repeat 2 28 0 278 103 0 0 chr5 94323866 94323905 -105306245 + tRNA-Thr-ACA tRNA tRNA 1 39 -37 249 314 34 51 chr5 94323967 94324085 -105306065 - MIR SINE MIR -75 187 72 188 260 137 41 chr5 94324430 94324503 -105305647 + L2 LINE L2 3136 3215 -57 1140 112 24 68 chr5 94324965 94325170 -105304980 + AluJo SINE Alu 113 308 -4 543 300 114 46 chr5 94325255 94325917 -105304233 + L2 LINE L2 2589 3290 -23 2319 77 17 0 chr5 94325933 94326232 -105303918 + AluY SINE Alu 1 304 -7 811 148 7 84 chr5 94326387 94326542 -105303608 + FRAM SINE Alu 1 142 -34 29 0 0 0 chr5 94329178 94329207 -105300943 + AT_rich Low_complexity Low_complexity 1 29 0 31 0 0 0 chr5 94330987 94331018 -105299132 + AT_rich Low_complexity Low_complexity 1 31 0 1964 132 3 17 chr5 94331018 94331334 -105298816 + AluSx SINE Alu 1 312 0 329 291 266 5 chr5 94331410 94331609 -105298541 - MIR SINE MIR 0 262 12 1363 182 68 11 chr5 94333099 94333363 -105296787 - AluJo SINE Alu -33 279 1 27 29 0 0 chr5 94334159 94334193 -105295957 + AT_rich Low_complexity Low_complexity 1 34 0 1086 193 23 28 chr5 94335461 94335679 -105294471 - MER20 DNA MER1_type -1 218 2 486 283 9 0 chr5 94336117 94336230 -105293920 - MER81 DNA DNA 0 114 1 321 135 0 0 chr5 94337220 94337272 -105292878 + (GGGA)n Simple_repeat Simple_repeat 4 55 0 308 200 0 15 chr5 94337767 94337832 -105292318 + MER5A DNA MER1_type 47 110 -79 925 323 105 38 chr5 94337868 94338937 -105291213 + L2 LINE L2 2164 3301 -12 24 0 0 0 chr5 94340998 94341022 -105289128 + AT_rich Low_complexity Low_complexity 1 24 0 197 267 67 0 chr5 94341441 94341501 -105288649 - L3 LINE CR1 -551 1026 963 645 304 74 8 chr5 94341742 94341985 -105288165 + MIR SINE MIR 2 260 -2 402 288 64 43 chr5 94342026 94342277 -105287873 - L1ME LINE L1 -508 5658 5381 48 0 0 0 chr5 94342513 94342561 -105287589 + AT_rich Low_complexity Low_complexity 1 48 0 392 211 81 62 chr5 94343865 94343911 -105286239 - L1MA10 LINE L1 -3 6331 6286 513 239 63 73 chr5 94343911 94344116 -105286034 - L1ME1 LINE L1 -44 6122 5920 794 137 14 14 chr5 94444159 94444298 -105185852 + MLT1D LTR MaLR 367 505 0 311 310 53 9 chr5 94446698 94446811 -105183339 + MIR SINE MIR 127 244 -18 189 171 0 0 chr5 94447080 94447115 -105183035 + (TA)n Simple_repeat Simple_repeat 1 35 0 502 288 71 42 chr5 94447307 94447547 -105182603 - MIR SINE MIR -2 260 14 24 32 0 0 chr5 94449006 94449037 -105181113 + GC_rich Low_complexity Low_complexity 1 31 0 1109 188 19 10 chr5 94449518 94449725 -105180425 + AluJo SINE Alu 89 297 -15 368 312 87 17 chr5 94449977 94450150 -105180000 - MIR SINE MIR -66 196 12 478 299 39 0 chr5 94450527 94450681 -105179469 - MIR SINE MIR 0 262 103 690 305 24 0 chr5 94450688 94450901 -105179249 - MIR SINE MIR -33 229 12 1847 148 0 49 chr5 94451188 94451512 -105178638 - AluJo SINE Alu -4 308 1 2283 106 7 0 chr5 94451523 94451816 -105178334 - AluSx SINE Alu -17 295 1 279 287 48 104 chr5 94451838 94452089 -105178061 - L2 LINE L2 -5 3267 3031 1205 135 6 0 chr5 94452404 94452567 -105177583 - AluSx SINE Alu -148 164 1 570 265 75 67 chr5 94452572 94452931 -105177219 - L1ME1 LINE L1 -234 5887 5526 283 269 0 0 chr5 94453228 94453295 -105176855 - L2 LINE L2 0 3313 3247 2430 113 0 0 chr5 94454124 94454435 -105175715 + AluSx SINE Alu 1 311 -1 2071 135 3 0 chr5 94454503 94454791 -105175359 + AluSx SINE Alu 7 295 -17 2033 137 3 25 chr5 94454793 94455107 -105175043 + AluSx SINE Alu 1 307 -5 394 107 0 0 chr5 94455107 94455163 -105174987 + L1MA6 LINE L1 6110 6165 -135 2353 69 3 3 chr5 94455285 94455658 -105174492 + AluY SINE Alu 1 373 0 743 108 150 0 chr5 94455878 94455998 -105174152 - FRAM SINE Alu -14 162 25 346 232 3 12 chr5 94456002 94456087 -105174063 - AluJ/FLAM SINE Alu -239 63 1 3254 78 23 2 chr5 94456101 94456519 -105173631 + MER41A LTR ERV1 1 430 -124 2179 125 0 3 chr5 94456519 94456832 -105173318 - AluSx SINE Alu 0 312 1 3254 78 23 2 chr5 94456832 94456851 -105173299 + MER41A LTR ERV1 430 447 -107 965 464 54 0 chr5 94456947 94457227 -105172923 - AluJo SINE Alu -7 295 1 183 283 0 0 chr5 94457310 94457370 -105172780 + CT-rich Low_complexity Low_complexity 1 60 0 1795 161 10 3 chr5 94457373 94457665 -105172485 - AluSx SINE Alu -18 294 1 1985 145 10 0 chr5 94457935 94458224 -105171926 + AluSx SINE Alu 1 292 -20 2294 101 3 3 chr5 94458228 94458534 -105171616 + AluSx SINE Alu 1 306 -6 255 300 138 42 chr5 94459329 94459569 -105170581 - L2 LINE L2 -1973 1341 1079 207 167 0 0 chr5 94459840 94459882 -105170268 + (CA)n Simple_repeat Simple_repeat 2 43 0 299 283 47 0 chr5 94460295 94460401 -105169749 - MIR SINE MIR -65 143 33 258 302 48 24 chr5 94460845 94460971 -105169179 - MIR SINE MIR -51 211 83 1406 149 5 9 chr5 94461051 94461273 -105168877 - AluJo SINE Alu -15 297 77 1511 122 9 0 chr5 94461373 94461629 -105168521 + L1PB2 LINE L1 5918 6175 0 31 0 0 0 chr5 94461636 94461667 -105168483 + AT_rich Low_complexity Low_complexity 1 31 0 299 146 18 0 chr5 94461787 94461842 -105168308 + HY1 scRNA scRNA 56 111 -1 34 18 0 36 chr5 94461842 94461862 -105168288 + AT_rich Low_complexity Low_complexity 1 20 -34 1681 141 91 0 chr5 94461862 94462125 -105168025 + AluSx SINE Alu 1 287 -25 34 18 0 36 chr5 94462125 94462160 -105167990 + AT_rich Low_complexity Low_complexity 20 54 0 196 200 0 0 chr5 94462189 94462229 -105167921 + L2 LINE L2 3264 3303 -10 618 49 0 0 chr5 94462231 94462313 -105167837 + (CA)n Simple_repeat Simple_repeat 1 82 0 1886 118 0 57 chr5 94462390 94462686 -105167464 - AluSp SINE Alu -3 310 32 827 152 0 55 chr5 94462802 94462966 -105167184 - MER21A LTR ERV1 -776 155 1 24 0 0 0 chr5 94463016 94463040 -105167110 + AT_rich Low_complexity Low_complexity 1 24 0 659 284 220 13 chr5 94463046 94463326 -105166824 - HAL1 LINE L1 -542 1965 1744 2153 90 10 32 chr5 94463326 94463675 -105166475 - AluSp SINE Alu 0 313 1 659 284 220 13 chr5 94463675 94463844 -105166306 - HAL1 LINE L1 -763 1744 1423 827 180 0 0 chr5 94463850 94463978 -105166172 - FLAM_C SINE Alu -1 132 5 521 60 0 0 chr5 94464004 94464071 -105166079 - MER41A LTR ERV1 -88 466 400 276 30 0 0 chr5 94464511 94464544 -105165606 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 226 236 0 14 chr5 94465606 94465621 -105164529 - L1MA10 LINE L1 -4 6330 6316 1836 221 61 26 chr5 94465621 94466230 -105163920 - L1ME1 LINE L1 -10 6156 5401 2576 221 44 37 chr5 94466251 94466817 -105163333 - L1ME1 LINE L1 -1716 4430 3854 2181 128 7 0 chr5 94466817 94467114 -105163036 - AluSx SINE Alu -13 299 1 2576 221 44 37 chr5 94467114 94467408 -105162742 - L1ME1 LINE L1 -2292 3854 3564 986 185 0 0 chr5 94467513 94467694 -105162456 + AluJb SINE Alu 128 308 0 1868 118 68 11 chr5 94467912 94468192 -105161958 - AluSx SINE Alu -16 296 1 473 141 0 0 chr5 94468941 94469012 -105161138 + Alu SINE Alu 236 306 -6 186 0 40 0 chr5 94469170 94469195 -105160955 + (TTG)n Simple_repeat Simple_repeat 2 180 0 1677 133 3 63 chr5 94469195 94469496 -105160654 - AluJb SINE Alu -29 283 1 2204 97 33 3 chr5 94469971 94470271 -105159879 + AluSx SINE Alu 1 309 -3 2155 115 0 3 chr5 94470489 94470785 -105159365 + AluSx SINE Alu 1 295 -17 1214 140 19 33 chr5 94470916 94471130 -105159020 - L1PA16 LINE L1 0 6166 5956 331 149 0 0 chr5 94471194 94471241 -105158909 - Alu SINE Alu -253 47 1 349 229 10 83 chr5 94471293 94471389 -105158761 + L2 LINE L2 3225 3313 0 207 88 0 0 chr5 94471960 94471994 -105158156 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2037 133 20 3 chr5 94472603 94472905 -105157245 - AluSx SINE Alu -3 309 3 823 175 39 7 chr5 94472933 94473087 -105157063 - MLT1B LTR MaLR 0 390 232 1339 148 121 164 chr5 94473178 94473697 -105156453 - LTR54B LTR ERV1 -1 497 1 227 269 0 0 chr5 94473724 94473776 -105156374 + T-rich Low_complexity Low_complexity 3 54 0 759 207 0 49 chr5 94473810 94474001 -105156149 + FRAM SINE Alu 10 176 0 873 106 18 193 chr5 94474056 94474273 -105155877 + MER7A DNA MER2_type 32 208 -138 894 163 23 91 chr5 94474273 94474526 -105155624 - MER4A LTR ERV1 0 465 329 2335 111 60 28 chr5 94474526 94474879 -105155271 - THE1B LTR MaLR 0 364 1 894 163 23 91 chr5 94474879 94475061 -105155089 - MER4A LTR ERV1 -136 329 136 1663 172 8 0 chr5 94475230 94475498 -105154652 - AluSx SINE Alu -42 270 1 989 126 0 15 chr5 94475687 94475822 -105154328 - FLAM_C SINE Alu 0 133 1 190 179 36 36 chr5 94475952 94476008 -105154142 + MIR3 SINE MIR 139 194 -14 532 272 78 22 chr5 94476213 94476393 -105153757 + MLT1K LTR MaLR 261 450 -138 832 273 22 28 chr5 94476436 94476693 -105153457 + HAL1 LINE L1 2023 2279 -228 1828 133 104 23 chr5 94476693 94477040 -105153110 + THE1C LTR MaLR 1 375 0 832 273 22 28 chr5 94477040 94477101 -105153049 + HAL1 LINE L1 2279 2339 -168 1885 145 13 33 chr5 94477109 94477413 -105152737 + AluJb SINE Alu 1 298 -14 834 189 0 0 chr5 94477465 94477587 -105152563 + FLAM_C SINE Alu 2 123 -20 1714 251 74 94 chr5 94477624 94477931 -105152219 - HAL1 LINE L1 -1146 1361 1049 1872 167 6 28 chr5 94477931 94478249 -105151901 - AluJb SINE Alu -1 311 1 1714 251 74 94 chr5 94478249 94478329 -105151821 - HAL1 LINE L1 -1458 1049 969 344 59 59 0 chr5 94478329 94478397 -105151753 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 1714 251 74 94 chr5 94478397 94479062 -105151088 - HAL1 LINE L1 -1538 969 329 2004 109 4 0 chr5 94479062 94479327 -105150823 + AluSq SINE Alu 14 279 -34 33 0 0 0 chr5 94479648 94479681 -105150469 + AT_rich Low_complexity Low_complexity 1 33 0 1113 154 0 24 chr5 94479965 94480134 -105150016 + FRAM SINE Alu 1 164 -12 409 264 38 0 chr5 94481183 94481342 -105148808 + (CATATA)n Simple_repeat Simple_repeat 3 167 0 291 247 52 0 chr5 94481348 94481445 -105148705 + L1ME4a LINE L1 6018 6119 -2 452 309 126 21 chr5 94482754 94482945 -105147205 - MLT1J2 LTR MaLR 0 450 240 237 264 189 0 chr5 94483020 94483126 -105147024 - MLT1J2 LTR MaLR -324 126 1 1682 158 14 27 chr5 94483268 94483565 -105146585 - AluJb SINE Alu -19 293 1 1910 156 10 0 chr5 94483802 94484097 -105146053 + AluSx SINE Alu 1 298 -14 26 0 0 0 chr5 94485810 94485836 -105144314 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr5 94485958 94485981 -105144169 + AT_rich Low_complexity Low_complexity 1 23 0 2007 126 27 3 chr5 94486472 94486765 -105143385 + AluSx SINE Alu 1 300 -12 1403 265 88 26 chr5 94487541 94488311 -105141839 + L2 LINE L2 2494 3310 -3 190 316 139 13 chr5 94488317 94488475 -105141675 + MIR SINE MIR 72 249 -13 180 269 0 39 chr5 94488589 94488641 -105141509 + L2 LINE L2 2988 3037 -235 625 130 10 10 chr5 94488668 94488768 -105141382 - FLAM_A SINE Alu -13 129 30 258 235 12 47 chr5 94489201 94489286 -105140864 + L1ME LINE L1 46 127 -5943 636 287 71 56 chr5 94489427 94489645 -105140505 - HAL1 LINE L1 -1478 1029 803 1917 125 42 14 chr5 94489645 94489934 -105140216 + AluJb SINE Alu 1 297 -15 636 287 71 56 chr5 94489934 94490039 -105140111 - HAL1 LINE L1 -1704 803 701 188 99 99 0 chr5 94490043 94490114 -105140036 + (TA)n Simple_repeat Simple_repeat 1 78 0 956 318 74 17 chr5 94490145 94490563 -105139587 - HAL1 LINE L1 -1840 667 226 263 234 51 56 chr5 94490662 94490803 -105139347 - L1MEd LINE L1 -4812 1317 1186 2105 120 7 7 chr5 94490803 94491103 -105139047 - AluSg SINE Alu -10 300 1 263 234 51 56 chr5 94491103 94491123 -105139027 - L1MEd LINE L1 -4943 1186 1167 490 339 65 28 chr5 94491183 94491537 -105138613 - L1MEd LINE L1 -5350 769 403 2137 115 27 3 chr5 94491628 94491924 -105138226 - AluSg SINE Alu -7 303 1 2096 123 0 0 chr5 94492318 94492639 -105137511 + AluSx SINE Alu 1 321 0 297 203 135 14 chr5 94492650 94492724 -105137426 - MLT1J2 LTR MaLR -366 84 2 256 336 58 0 chr5 94493377 94493481 -105136669 + L2 LINE L2 3190 3299 -14 195 100 0 0 chr5 94494717 94494747 -105135403 + (CAA)n Simple_repeat Simple_repeat 2 31 0 842 116 29 22 chr5 94495167 94495305 -105134845 - AluSq/x SINE Alu -173 139 1 2888 165 99 92 chr5 94495305 94496074 -105134076 + MER21A LTR ERV1 139 912 -19 1554 174 83 0 chr5 94496133 94496421 -105133729 - AluJb SINE Alu 0 312 1 2214 130 0 13 chr5 94496430 94496745 -105133405 - AluSx SINE Alu -1 311 1 850 143 0 106 chr5 94497375 94497494 -105132656 + U4 snRNA snRNA 1 100 -45 1815 185 3 0 chr5 94497494 94497791 -105132359 - AluJb SINE Alu -12 300 3 850 143 0 106 chr5 94497791 94497832 -105132318 + U4 snRNA snRNA 100 144 -1 1977 142 0 20 chr5 94498102 94498238 -105131912 + AluJb SINE Alu 1 138 -174 2025 124 0 7 chr5 94498238 94498545 -105131605 + AluSx SINE Alu 1 305 0 1977 142 0 20 chr5 94498545 94498709 -105131441 + AluJb SINE Alu 138 296 -16 1051 162 0 46 chr5 94498827 94499022 -105131128 + FAM SINE Alu 1 175 0 21 71 0 0 chr5 94499229 94499271 -105130879 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 94499297 94499318 -105130832 + AT_rich Low_complexity Low_complexity 1 21 0 1306 110 0 0 chr5 94499377 94499550 -105130600 + AluSq SINE Alu 50 222 -91 6173 22 0 0 chr5 94499972 94500687 -105129463 - L1P LINE L1 -848 5298 4584 6649 7 0 0 chr5 94500687 94501384 -105128766 + L1PA2 LINE L1 5458 6155 0 261 128 0 0 chr5 94501384 94501431 -105128719 - Charlie5 DNA MER1_type -103 2509 2463 679 141 0 0 chr5 94501590 94501689 -105128461 - AluSg/x SINE Alu -1 311 213 2215 122 10 0 chr5 94501972 94502098 -105128052 + AluSx SINE Alu 1 124 -188 189 0 0 0 chr5 94502098 94502119 -105128031 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 2215 122 10 0 chr5 94502119 94502296 -105127854 + AluSx SINE Alu 124 307 -5 1758 234 59 7 chr5 94502403 94502847 -105127303 + MLT1C LTR MaLR 1 467 0 303 234 365 15 chr5 94502928 94503065 -105127085 - MER5A DNA MER1_type -1 188 4 2017 96 65 17 chr5 94503086 94503377 -105126773 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr5 94503378 94503399 -105126751 + AT_rich Low_complexity Low_complexity 1 21 0 2083 117 27 0 chr5 94503409 94503709 -105126441 + AluSg SINE Alu 1 308 -2 794 126 0 0 chr5 94503709 94503812 -105126338 + AluSg/x SINE Alu 134 236 -76 330 87 0 0 chr5 94503958 94504004 -105126146 + (GGA)n Simple_repeat Simple_repeat 2 47 0 940 131 0 29 chr5 94504054 94504191 -105125959 - FLAM_C SINE Alu 0 133 1 1727 178 17 3 chr5 94504568 94504860 -105125290 + AluJb SINE Alu 1 296 -16 201 377 38 28 chr5 94504872 94504978 -105125172 - MER5B DNA MER1_type -65 113 7 23 68 0 0 chr5 94505016 94505060 -105125090 + AT_rich Low_complexity Low_complexity 1 44 0 1760 175 0 9 chr5 94505065 94505380 -105124770 + AluJb SINE Alu 1 312 0 864 160 15 0 chr5 94505388 94505519 -105124631 + FLAM_A SINE Alu 1 133 0 272 283 52 45 chr5 94505704 94505917 -105124233 - MER5A DNA MER1_type -3 186 1 2490 43 30 3 chr5 94506047 94506348 -105123802 - AluY SINE Alu -2 309 1 196 316 40 26 chr5 94507957 94508033 -105122117 - MIR3 SINE MIR -46 162 86 277 143 0 20 chr5 94508386 94508435 -105121715 - MER4A LTR ERV1 -616 48 1 889 154 44 0 chr5 94508435 94508571 -105121579 + Tigger3(Golem) DNA MER2_type 2887 3028 -1 191 364 61 15 chr5 94508920 94509052 -105121098 + L2 LINE L2 3116 3253 -19 638 276 29 53 chr5 94509392 94509638 -105120512 - MIR SINE MIR -15 247 8 240 343 67 9 chr5 94509650 94509755 -105120395 - MIR SINE MIR -116 146 36 1650 178 6 38 chr5 94509933 94510253 -105119897 + AluJb SINE Alu 3 312 0 1121 207 124 0 chr5 94511586 94511861 -105118289 + 7SLRNA srpRNA srpRNA 10 318 -2 730 213 7 0 chr5 94512059 94512200 -105117950 - FLAM_C SINE Alu 0 143 2 31 58 0 0 chr5 94513103 94513155 -105116995 + AT_rich Low_complexity Low_complexity 1 52 0 563 254 124 0 chr5 94513162 94513347 -105116803 - MIR SINE MIR -1 261 54 1293 91 91 0 chr5 94513447 94513644 -105116506 - MER41B LTR ERV1 -417 218 4 1820 138 14 7 chr5 94515062 94515345 -105114805 + AluJb SINE Alu 11 295 -17 660 156 70 189 chr5 94515453 94515475 -105114675 + MER21B LTR ERV1 5 28 -835 2145 132 0 0 chr5 94515475 94515778 -105114372 + AluSx SINE Alu 1 303 -9 660 156 70 189 chr5 94515778 94516025 -105114125 + MER21B LTR ERV1 28 242 -621 2232 89 0 0 chr5 94516076 94516356 -105113794 + AluY SINE Alu 1 280 -31 1344 146 33 0 chr5 94516404 94516616 -105113534 - AluJb SINE Alu -93 219 1 542 224 39 101 chr5 94516620 94516799 -105113351 + MER21B LTR ERV1 298 465 -398 2235 127 7 0 chr5 94516960 94517268 -105112882 + AluSx SINE Alu 1 310 -2 696 231 7 0 chr5 94517353 94517500 -105112650 + MER5A DNA MER1_type 42 189 0 2055 138 3 0 chr5 94517848 94518144 -105112006 + AluSq SINE Alu 1 297 -16 2226 122 0 3 chr5 94518473 94518776 -105111374 + AluSx SINE Alu 1 302 -10 237 252 22 25 chr5 94518970 94519061 -105111089 - MIR SINE MIR -59 149 82 288 359 0 0 chr5 94519407 94519499 -105110651 - L2 LINE L2 0 3313 3222 1858 177 3 0 chr5 94519953 94520253 -105109897 + AluJo SINE Alu 1 301 -11 627 134 10 10 chr5 94520867 94520964 -105109186 - AluSg/x SINE Alu -137 173 77 501 17 0 0 chr5 94521068 94521126 -105109024 + (GGAA)n Simple_repeat Simple_repeat 4 61 0 1593 170 55 24 chr5 94521139 94521428 -105108722 - AluJo SINE Alu -14 298 1 1885 158 0 13 chr5 94521608 94521911 -105108239 + AluSx SINE Alu 1 299 -13 1790 191 96 92 chr5 94522464 94523029 -105107121 - MLT1F1 LTR MaLR 0 567 1 530 325 18 6 chr5 94523325 94523494 -105106656 + MER5B DNA MER1_type 8 178 0 1245 140 72 5 chr5 94524341 94524548 -105105602 - AluSx SINE Alu -91 221 1 207 226 16 32 chr5 94524590 94524652 -105105498 - MIR SINE MIR -111 151 91 242 298 0 32 chr5 94524670 94524764 -105105386 + T-rich Low_complexity Low_complexity 2 92 0 1686 167 67 19 chr5 94526788 94527377 -105102773 + MER39 LTR ERV1 1 706 -1 346 186 69 29 chr5 94527667 94527769 -105102381 + MER39 LTR ERV1 598 703 -4 22 0 0 0 chr5 94527876 94527898 -105102252 + AT_rich Low_complexity Low_complexity 1 22 0 531 317 68 16 chr5 94528399 94528648 -105101502 - MIR SINE MIR 0 262 1 2152 96 3 90 chr5 94528895 94529229 -105100921 + AluSx SINE Alu 2 306 -6 187 235 0 0 chr5 94529498 94529532 -105100618 - MIR SINE MIR -160 102 69 22 0 0 0 chr5 94529877 94529899 -105100251 + AT_rich Low_complexity Low_complexity 1 22 0 1105 94 0 0 chr5 94530399 94530537 -105099613 - AluSq/x SINE Alu -174 138 1 1728 170 51 24 chr5 94531410 94531780 -105098370 + Tigger3b DNA MER2_type 2 381 -850 6106 126 41 8 chr5 94531783 94532341 -105097809 + Tigger1 DNA MER2_type 4 613 -1805 2589 58 0 3 chr5 94532341 94532652 -105097498 + AluY SINE Alu 2 311 0 6106 126 41 8 chr5 94532652 94533108 -105097042 + Tigger1 DNA MER2_type 613 1052 -1366 4650 122 48 1 chr5 94533104 94533867 -105096283 + Tigger1 DNA MER2_type 1569 2367 -51 * 3917 118 35 84 chr5 94533892 94534587 -105095563 + Tigger3b DNA MER2_type 380 1026 -2003 1853 158 6 56 chr5 94534587 94534942 -105095208 - MER1B DNA MER1_type 0 337 1 3917 118 35 84 chr5 94534942 94535107 -105095043 + Tigger3b DNA MER2_type 1026 1198 -34 1872 206 34 64 chr5 94535107 94535505 -105094645 - L1ME2 LINE L1 -90 6074 5665 2222 100 3 7 chr5 94535505 94535805 -105094345 - AluY SINE Alu -12 299 1 1872 206 34 64 chr5 94535805 94536288 -105093862 - L1ME2 LINE L1 -499 5665 5114 1099 251 56 45 chr5 94536291 94536806 -105093344 - L1ME2 LINE L1 -2531 3615 3095 2456 139 9 36 chr5 94536922 94537368 -105092782 - Tigger2a DNA MER2_type 0 434 1 1548 182 54 4 chr5 94537699 94537979 -105092171 - AluJo SINE Alu -18 294 1 744 158 25 0 chr5 94537994 94538114 -105092036 - AluJb SINE Alu -189 123 1 213 103 88 0 chr5 94538170 94538238 -105091912 + (TTAA)n Simple_repeat Simple_repeat 4 77 0 1079 66 0 26 chr5 94538319 94538470 -105091680 - L1PA11 LINE L1 0 6174 6028 7655 120 11 5 chr5 94538470 94538608 -105091542 - L1PA11 LINE L1 -538 5636 5500 2046 123 3 26 chr5 94538608 94538917 -105091233 - AluSq SINE Alu -11 302 1 7655 120 11 5 chr5 94538917 94540315 -105089835 - L1PA11 LINE L1 -674 5500 4090 954 155 16 21 chr5 94540324 94540517 -105089633 - L1MB8 LINE L1 0 6178 5987 309 316 22 22 chr5 94540520 94540656 -105089494 + L1ME LINE L1 5705 5840 -281 305 250 23 45 chr5 94541140 94541228 -105088922 - MER5B DNA MER1_type -3 175 90 1791 167 54 19 chr5 94541496 94541616 -105088534 - MLT1B LTR MaLR -6 384 270 1842 170 3 13 chr5 94541616 94541928 -105088222 - AluJb SINE Alu -3 309 1 1791 167 54 19 chr5 94541928 94542178 -105087972 - MLT1B LTR MaLR -120 270 1 303 259 58 22 chr5 94542749 94542888 -105087262 - MLT1J2 LTR MaLR -238 212 69 1274 202 35 53 chr5 94544292 94544668 -105085482 - MLT1A2 LTR MaLR -4 370 2 758 321 137 9 chr5 94544701 94545016 -105085134 + L2 LINE L2 2622 2976 -338 216 0 0 0 chr5 94545020 94545044 -105085106 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 1558 181 7 11 chr5 94545045 94545326 -105084824 - AluJb SINE Alu -32 280 1 299 273 20 40 chr5 94545418 94545517 -105084633 + L2 LINE L2 3216 3312 -1 576 347 167 14 chr5 94545519 94545945 -105084205 + L2 LINE L2 2208 2698 -616 1417 125 7 139 chr5 94546315 94546654 -105083496 - AluJo SINE Alu 0 320 22 823 208 142 25 chr5 94547458 94547698 -105082452 + MER58 DNA MER1_type 2 269 -72 371 244 184 28 chr5 94547698 94547915 -105082235 + MER112 DNA MER1_type 5 255 -1 362 313 61 37 chr5 94547929 94548092 -105082058 + MER5B DNA MER1_type 7 173 -5 537 259 142 25 chr5 94548106 94548268 -105081882 + MER5A DNA MER1_type 9 189 0 680 214 125 0 chr5 94549377 94549545 -105080605 + MER5A DNA MER1_type 1 189 0 183 42 0 0 chr5 94550260 94550284 -105079866 + (A)n Simple_repeat Simple_repeat 1 24 0 189 329 0 0 chr5 94550662 94550735 -105079415 + L2 LINE L2 2286 2358 -956 1009 169 0 23 chr5 94550735 94550907 -105079243 - FRAM SINE Alu -10 166 1 191 358 86 25 chr5 94551460 94551622 -105078528 + L2 LINE L2 2850 3021 -251 * 424 309 49 60 chr5 94551606 94551871 -105078279 + L2 LINE L2 2804 3065 -207 446 266 58 23 chr5 94551974 94552147 -105078003 - MLT1J2 LTR MaLR -4 446 268 510 252 126 0 chr5 94552178 94552329 -105077821 - MLT1J1 LTR MaLR -272 174 5 2403 68 10 0 chr5 94552468 94552795 -105077355 - AluY SINE Alu 0 311 1 1704 145 66 38 chr5 94552980 94553345 -105076805 + THE1C LTR MaLR 1 375 0 2814 140 11 0 chr5 94553377 94553834 -105076316 - MLT1C LTR MaLR 0 467 6 274 331 33 58 chr5 94554662 94554783 -105075367 - MIR SINE MIR -65 143 26 1938 117 0 35 chr5 94554924 94555253 -105074897 + AluSg SINE Alu 1 319 0 1914 155 3 7 chr5 94555443 94555734 -105074416 + AluSx SINE Alu 1 290 -22 776 154 0 39 chr5 94556012 94556142 -105074008 + FLAM_C SINE Alu 1 125 -8 32 0 0 0 chr5 94556147 94556179 -105073971 + AT_rich Low_complexity Low_complexity 1 32 0 240 310 0 33 chr5 94556576 94556706 -105073444 + CT-rich Low_complexity Low_complexity 1 125 0 211 318 112 19 chr5 94557088 94557195 -105072955 + MER5A DNA MER1_type 1 117 -72 297 226 0 44 chr5 94557283 94557464 -105072686 + (TAA)n Simple_repeat Simple_repeat 2 174 0 183 80 0 0 chr5 94559429 94559454 -105070696 + (CAT)n Simple_repeat Simple_repeat 2 26 0 1861 152 7 36 chr5 94559629 94559722 -105070428 + AluJb SINE Alu 1 95 -217 2239 92 0 0 chr5 94559722 94560123 -105070027 + AluSx SINE Alu 1 401 0 1861 152 7 36 chr5 94560123 94560331 -105069819 + AluJb SINE Alu 95 294 -18 236 125 0 42 chr5 94560685 94560733 -105069417 - MADE1 DNA Mariner 0 80 35 2458 82 0 0 chr5 94560740 94561044 -105069106 + AluSx SINE Alu 1 304 -8 637 155 0 10 chr5 94561051 94561186 -105068964 + FLAM_A SINE Alu 18 151 0 225 263 10 101 chr5 94561317 94561416 -105068734 + L2 LINE L2 3182 3271 -1 351 188 0 14 chr5 94561901 94561970 -105068180 - MIR SINE MIR -119 143 76 2335 115 0 13 chr5 94562010 94562324 -105067826 + AluSx SINE Alu 2 311 -1 795 181 11 64 chr5 94562525 94562649 -105067501 - MER5B DNA MER1_type 0 178 66 2244 107 0 3 chr5 94562649 94562948 -105067202 - AluSc SINE Alu -11 298 1 795 181 11 64 chr5 94562948 94563011 -105067139 - MER5B DNA MER1_type -112 66 1 550 263 0 0 chr5 94563728 94563861 -105066289 - MER94 DNA DNA 0 134 2 296 225 0 0 chr5 94564026 94564106 -105066044 + L1MEc LINE L1 2177 2256 -4140 278 290 32 0 chr5 94564532 94564625 -105065525 + MER94 DNA DNA 39 134 0 402 331 158 25 chr5 94564824 94565186 -105064964 + L3 LINE CR1 1094 1503 -74 1605 157 0 69 chr5 94565186 94565518 -105064632 - AluJb SINE Alu 0 311 1 1512 291 48 25 chr5 94565580 94566140 -105064010 + MLT1K LTR MaLR 16 588 0 21 0 0 0 chr5 94566465 94566486 -105063664 + AT_rich Low_complexity Low_complexity 1 21 0 326 224 0 24 chr5 94566631 94566716 -105063434 - LTR67 LTR ERVL -38 519 437 761 360 40 16 chr5 94567488 94568232 -105061918 - ERVL LTR ERVL -519 5245 4484 1205 183 12 50 chr5 94568293 94568533 -105061617 + Tigger7 DNA MER2_type 1 231 -502 573 90 27 81 chr5 94568537 94568561 -105061589 + Tigger7 DNA MER2_type 2382 2406 -81 2270 116 47 8 chr5 94568561 94568922 -105061228 - THE1C LTR MaLR 0 375 1 10322 109 38 8 chr5 94568922 94570456 -105059694 - THE1C-int LTR MaLR 0 1580 1 2208 113 28 64 chr5 94570456 94570679 -105059471 - THE1C LTR MaLR 0 375 167 2068 120 0 11 chr5 94570679 94570965 -105059185 + AluSx SINE Alu 1 281 -31 204 88 29 0 chr5 94570965 94570999 -105059151 + (TAAA)n Simple_repeat Simple_repeat 2 92 0 2208 113 28 64 chr5 94570999 94571161 -105058989 - THE1C LTR MaLR -208 167 1 573 90 27 81 chr5 94571161 94571245 -105058905 + Tigger7 DNA MER2_type 2403 2486 -1 22 56 0 0 chr5 94571264 94571300 -105058850 + AT_rich Low_complexity Low_complexity 1 36 0 214 338 0 15 chr5 94571300 94571368 -105058782 + L2 LINE L2 3139 3205 -67 199 315 55 60 chr5 94573601 94573801 -105056349 + L2 LINE L2 2220 2418 -896 718 286 28 97 chr5 94574038 94574503 -105055647 - L2 LINE L2 -337 2977 2545 2152 173 65 65 chr5 94575092 94575602 -105054548 - LTR54 LTR ERV1 0 510 1 2062 212 66 53 chr5 94575604 94575662 -105054488 - LTR49-int LTR ERV1 -394 7143 7087 2357 96 0 10 chr5 94575662 94575975 -105054175 + AluSq SINE Alu 1 310 -3 2062 212 66 53 chr5 94575975 94576463 -105053687 - LTR49-int LTR ERV1 -450 7087 6590 260 275 62 12 chr5 94576508 94576588 -105053562 - LTR49-int LTR ERV1 -689 4182 4099 1002 176 18 12 chr5 94576597 94576762 -105053388 + FAM SINE Alu 1 166 -9 437 238 19 9 chr5 94576786 94576891 -105053259 - LTR49-int LTR ERV1 -760 4111 4006 413 232 0 0 chr5 94576891 94576973 -105053177 + FLAM_C SINE Alu 57 138 -5 1070 254 55 39 chr5 94576978 94577285 -105052865 - LTR49-int LTR ERV1 -846 4025 3714 225 232 192 40 chr5 94577286 94577385 -105052765 - LTR37A LTR ERV1 -309 117 4 3127 200 75 89 chr5 94577385 94578142 -105052008 - LTR49-int LTR ERV1 -525 5094 4328 1853 137 18 21 chr5 94578142 94578453 -105051697 - AluSx SINE Alu 0 310 1 3127 200 75 89 chr5 94578453 94579059 -105051091 - LTR49-int LTR ERV1 -1291 4328 3291 1989 146 7 0 chr5 94579060 94579348 -105050802 + AluSx SINE Alu 1 290 -22 800 228 9 76 chr5 94579494 94579718 -105050432 + MER63A DNA MER1_type 2 210 0 612 282 41 28 chr5 94580517 94580690 -105049460 - L1M4 LINE L1 -1537 4609 4429 2151 141 0 0 chr5 94580690 94580995 -105049155 + AluSx SINE Alu 1 305 -7 612 282 41 28 chr5 94580995 94581112 -105049038 - L1M4 LINE L1 -1717 4429 4315 1780 165 4 4 chr5 94581157 94581436 -105048714 - AluJb SINE Alu -8 304 26 648 228 11 26 chr5 94581457 94581646 -105048504 - L1M4 LINE L1 -2166 3980 3795 1555 244 111 17 chr5 94581702 94582124 -105048026 - LTR40b LTR ERVL 0 462 1 653 157 19 0 chr5 94582246 94582354 -105047796 - AluJ SINE Alu -47 265 156 640 185 0 0 chr5 94582347 94582455 -105047695 - AluJ SINE Alu -194 118 11 * 1007 217 101 19 chr5 94582807 94583074 -105047076 + AluSx SINE Alu 1 289 -13 196 109 22 22 chr5 94583125 94583171 -105046979 + A-rich Low_complexity Low_complexity 2 47 0 2244 119 3 3 chr5 94583341 94583653 -105046497 - AluSx SINE Alu 0 312 1 286 237 21 0 chr5 94583657 94583754 -105046396 + CT-rich Low_complexity Low_complexity 2 100 0 238 193 76 84 chr5 94583756 94583787 -105046363 - L2 LINE L2 0 3272 3242 1403 113 80 0 chr5 94583787 94584000 -105046150 + MER30 DNA MER1_type 1 230 0 238 193 76 84 chr5 94584000 94584087 -105046063 - L2 LINE L2 -30 3242 3155 338 221 62 44 chr5 94584114 94584227 -105045923 + L2 LINE L2 3158 3272 0 421 236 96 38 chr5 94585615 94585772 -105044378 + MIR SINE MIR 79 244 -18 2485 72 0 7 chr5 94586232 94586538 -105043612 + AluY SINE Alu 1 304 -7 2538 103 8 0 chr5 94586858 94587218 -105042932 - L1PB2 LINE L1 -283 5868 5506 246 32 0 0 chr5 94587233 94587264 -105042886 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 718 179 0 0 chr5 94587264 94587381 -105042769 - AluSq/x SINE Alu -196 117 1 2199 128 3 0 chr5 94587401 94587706 -105042444 - AluSp SINE Alu -7 306 1 1976 178 55 49 chr5 94587709 94587841 -105042309 - L1PB2 LINE L1 -657 5494 5364 2394 99 3 0 chr5 94587841 94588145 -105042005 - AluSp SINE Alu -8 305 1 1976 178 55 49 chr5 94588145 94588722 -105041428 - L1PB2 LINE L1 -787 5364 4774 1600 161 0 77 chr5 94588959 94589085 -105041065 + AluJo SINE Alu 1 135 -177 2064 117 0 42 chr5 94589085 94589392 -105040758 - AluSx SINE Alu -18 294 1 1600 161 0 77 chr5 94589392 94589588 -105040562 + AluJo SINE Alu 135 298 -14 2083 119 10 10 chr5 94589822 94590124 -105040026 - AluSx SINE Alu -10 302 1 555 261 45 20 chr5 94590396 94590595 -105039555 + L2 LINE L2 2426 2629 -685 35 65 0 22 chr5 94590595 94590635 -105039515 + AT_rich Low_complexity Low_complexity 1 40 -50 2255 107 0 3 chr5 94590635 94590943 -105039207 - AluSg SINE Alu -3 307 1 35 65 0 22 chr5 94590943 94590994 -105039156 + AT_rich Low_complexity Low_complexity 40 90 0 21 0 0 0 chr5 94591029 94591050 -105039100 + AT_rich Low_complexity Low_complexity 1 21 0 500 250 59 7 chr5 94591195 94591347 -105038803 - LTR33 LTR ERVL -2 519 360 250 164 18 0 chr5 94591435 94591490 -105038660 - LTR33 LTR ERVL -454 67 12 2471 60 0 7 chr5 94591594 94591895 -105038255 - AluSp SINE Alu -14 299 1 297 240 52 21 chr5 94592239 94592335 -105037815 - L2 LINE L2 0 3313 3215 1929 121 3 10 chr5 94592417 94592715 -105037435 - AluSx SINE Alu -11 301 6 1031 147 0 16 chr5 94592754 94592944 -105037206 + AluSg/x SINE Alu 122 308 -4 603 256 82 41 chr5 94592948 94593278 -105036872 + L2 LINE L2 2766 3111 -202 2280 89 0 49 chr5 94593278 94593605 -105036545 - AluY SINE Alu 0 311 1 603 256 82 41 chr5 94593605 94593647 -105036503 + L2 LINE L2 3111 3150 -163 711 214 9 81 chr5 94593751 94593961 -105036189 - MIR SINE MIR -24 238 44 223 286 143 8 chr5 94593961 94594080 -105036070 + L2 LINE L2 3178 3312 -1 * 345 211 63 21 chr5 94594079 94594174 -105035976 + MIR SINE MIR 148 246 -16 2156 106 0 3 chr5 94595040 94595343 -105034807 - AluSg SINE Alu 0 302 1 32 75 0 0 chr5 94595391 94595458 -105034692 + AT_rich Low_complexity Low_complexity 1 67 0 198 0 0 0 chr5 94595898 94595920 -105034230 + (CAG)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr5 94596610 94596631 -105033519 + AT_rich Low_complexity Low_complexity 1 21 0 2302 106 3 0 chr5 94596955 94597257 -105032893 - AluSp SINE Alu -10 303 1 1986 131 3 0 chr5 94597542 94597860 -105032290 - AluSx SINE Alu 0 319 1 234 0 0 0 chr5 94597915 94597941 -105032209 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 1148 132 61 5 chr5 94597962 94598159 -105031991 - AluJo SINE Alu -82 230 23 469 333 126 19 chr5 94598357 94598698 -105031452 + L2 LINE L2 2465 2861 -453 1754 168 16 47 chr5 94598698 94599020 -105031130 - AluJo SINE Alu 0 312 1 469 333 126 19 chr5 94599020 94599099 -105031051 + L2 LINE L2 2861 2930 -384 328 288 55 34 chr5 94599236 94599382 -105030768 + MLT1J1 LTR MaLR 13 161 -285 347 194 56 0 chr5 94599527 94599599 -105030551 + L2 LINE L2 3189 3264 -8 331 350 77 7 chr5 94599668 94599811 -105030339 - L2 LINE L2 -4 3268 3116 226 170 0 0 chr5 94599825 94599872 -105030278 + Alu SINE Alu 257 303 0 * 1585 218 49 3 chr5 94599868 94600020 -105030130 - MER82 DNA MER2_type -292 361 218 1858 169 7 3 chr5 94600020 94600328 -105029822 - AluSx SINE Alu -3 309 1 3732 108 57 10 chr5 94600335 94600916 -105029234 + MER4B LTR ERV1 1 608 -2 1585 218 49 3 chr5 94600916 94601099 -105029051 - MER82 DNA MER2_type -440 213 2 1961 159 0 16 chr5 94601132 94601440 -105028710 + AluJb SINE Alu 1 303 -9 893 98 0 0 chr5 94601540 94601663 -105028487 - AluSq/x SINE Alu -180 133 11 798 176 0 14 chr5 94601674 94601816 -105028334 - FLAM_A SINE Alu -2 140 1 497 16 0 0 chr5 94601894 94601957 -105028193 - L1PA2 LINE L1 0 6155 6093 808 139 0 9 chr5 94602487 94602602 -105027548 + AluJb SINE Alu 7 120 -192 268 187 13 13 chr5 94602635 94602710 -105027440 + (TG)n Simple_repeat Simple_repeat 2 76 0 2246 97 10 0 chr5 94602814 94603102 -105027048 + AluSc SINE Alu 1 291 -18 387 277 23 8 chr5 94603120 94603250 -105026900 - MER5A DNA MER1_type -49 140 9 2200 114 0 7 chr5 94603777 94604076 -105026074 + AluSx SINE Alu 1 297 -15 23 0 0 0 chr5 94604079 94604102 -105026048 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr5 94604302 94604328 -105025822 + (TA)n Simple_repeat Simple_repeat 1 26 0 2196 111 3 0 chr5 94604329 94604618 -105025532 - AluSx SINE Alu -22 290 1 1381 259 60 71 chr5 94604622 94604958 -105025192 - L2 LINE L2 -243 3070 2732 2301 113 3 0 chr5 94604958 94605267 -105024883 - AluSx SINE Alu -2 310 1 1381 259 60 71 chr5 94605267 94605319 -105024831 - L2 LINE L2 -581 2732 2681 2593 58 0 0 chr5 94605319 94605628 -105024522 - AluY SINE Alu -2 309 1 1381 259 60 71 chr5 94605628 94605893 -105024257 - L2 LINE L2 -632 2681 2403 693 206 29 69 chr5 94606012 94606216 -105023934 + MIR SINE MIR 37 232 -30 329 183 32 43 chr5 94606402 94606495 -105023655 + AluSg/x SINE Alu 211 302 0 1304 143 0 0 chr5 94606917 94607106 -105023044 - AluSg/x SINE Alu -14 298 110 404 164 0 0 chr5 94607549 94607622 -105022528 + FAM SINE Alu 106 178 -1 2136 142 0 0 chr5 94607746 94608056 -105022094 + AluSq SINE Alu 1 310 -3 400 294 25 6 chr5 94608217 94608377 -105021773 - L2 LINE L2 -622 2692 2530 994 137 58 97 chr5 94608460 94608686 -105021464 - MER20 DNA MER1_type 0 219 3 1451 194 11 11 chr5 94608733 94609006 -105021144 + AluJo SINE Alu 1 273 -39 249 33 0 0 chr5 94609011 94609041 -105021109 + (TC)n Simple_repeat Simple_repeat 1 30 0 903 163 54 0 chr5 94609041 94609188 -105020962 - AluSg/x SINE Alu -25 287 133 1877 149 31 3 chr5 94609193 94609482 -105020668 - AluSx SINE Alu -15 297 1 180 0 0 0 chr5 94609679 94609699 -105020451 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2967 86 261 2 chr5 94609707 94610206 -105019944 - SVA Other Other -437 949 322 859 179 7 7 chr5 94611080 94611225 -105018925 - FRAM SINE Alu -30 146 2 2181 131 0 3 chr5 94611349 94611655 -105018495 - AluSx SINE Alu -7 305 1 1960 125 0 44 chr5 94611850 94612171 -105017979 + AluSx SINE Alu 1 308 0 200 308 39 0 chr5 94612218 94612296 -105017854 + MIR SINE MIR 83 163 -99 506 252 146 32 chr5 94612298 94612544 -105017606 - MLT1L LTR MaLR -186 429 156 2270 93 13 16 chr5 94612557 94612867 -105017283 - AluSc SINE Alu 0 309 1 190 212 71 111 chr5 94613058 94613157 -105016993 - MIR SINE MIR -22 240 146 878 191 6 46 chr5 94613159 94613256 -105016894 - FAM SINE Alu -151 170 71 2035 132 46 62 chr5 94613256 94613329 -105016821 - THE1B LTR MaLR 0 364 291 2309 93 0 7 chr5 94613329 94613630 -105016520 - AluSc SINE Alu -10 299 1 2035 132 46 62 chr5 94613630 94613926 -105016224 - THE1B LTR MaLR -73 291 1 12455 81 5 0 chr5 94613926 94615499 -105014651 - THE1B-int LTR MaLR 0 1580 1 2157 125 54 23 chr5 94615499 94615852 -105014298 - THE1B LTR MaLR 0 364 1 878 191 6 46 chr5 94615852 94615925 -105014225 - FAM SINE Alu -247 74 5 524 283 7 0 chr5 94615931 94616069 -105014081 - MIR SINE MIR -108 154 16 1092 200 38 122 chr5 94616115 94616510 -105013640 + MLT1A1 LTR MaLR 4 365 0 913 191 31 10 chr5 94616659 94616853 -105013297 + AluJ SINE Alu 1 198 -114 532 191 0 11 chr5 94616963 94617057 -105013093 + AluJ SINE Alu 198 290 -22 188 0 74 0 chr5 94617057 94617084 -105013066 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 1490 146 0 0 chr5 94617130 94617349 -105012801 - AluSg/x SINE Alu -12 298 80 573 198 69 125 chr5 94617359 94617591 -105012559 - MER112 DNA MER1_type -34 226 8 258 200 144 22 chr5 94617613 94617703 -105012447 + MER5A DNA MER1_type 9 109 -80 441 0 0 0 chr5 94618004 94618053 -105012097 + (CA)n Simple_repeat Simple_repeat 2 50 0 391 302 88 26 chr5 94618053 94618245 -105011905 + MER102b DNA MER1_type 138 341 0 943 167 0 19 chr5 94618360 94618516 -105011634 + FAM SINE Alu 22 174 -11 1384 136 14 9 chr5 94618519 94618733 -105011417 + MER50 LTR ERV1 497 711 -23 308 249 12 6 chr5 94618732 94618846 -105011304 + MLT1L LTR MaLR 466 605 -10 * 2213 128 68 16 chr5 94618858 94619224 -105010926 + MER50-int LTR ERV1 35 419 -6786 2201 131 0 0 chr5 94619246 94619558 -105010592 + AluSx SINE Alu 1 312 0 510 289 67 19 chr5 94620117 94620325 -105009825 - MLT1K LTR MaLR -10 578 361 384 286 101 24 chr5 94620351 94620519 -105009631 - MLT1L LTR MaLR -270 345 165 2234 119 3 0 chr5 94620752 94621046 -105009104 - AluSp SINE Alu -18 295 1 651 199 2 13 chr5 94621114 94621256 -105008894 - MLT1A2 LTR MaLR 0 405 254 680 252 21 71 chr5 94621798 94621912 -105008238 - MLT1A2 LTR MaLR -106 268 150 2393 97 0 10 chr5 94621912 94622222 -105007928 - AluSx SINE Alu -5 307 1 680 252 21 71 chr5 94622222 94622389 -105007761 - MLT1A2 LTR MaLR -224 150 1 649 147 21 91 chr5 94622686 94622737 -105007413 - FLAM_C SINE Alu -179 133 80 2214 128 0 0 chr5 94622737 94623043 -105007107 - AluSx SINE Alu -6 306 1 649 147 21 91 chr5 94623043 94623134 -105007016 - FLAM_C SINE Alu -232 80 1 251 163 82 0 chr5 94623894 94623943 -105006207 - FLAM_A SINE Alu -14 119 67 535 343 47 17 chr5 94624588 94624824 -105005326 + MIR SINE MIR 4 246 -16 438 20 0 0 chr5 94625614 94625665 -105004485 + (CA)n Simple_repeat Simple_repeat 2 52 0 1908 143 6 58 chr5 94625696 94625830 -105004320 + AluSx SINE Alu 1 140 -172 2331 109 0 0 chr5 94625830 94626142 -105004008 + AluSx SINE Alu 1 312 0 1908 143 6 58 chr5 94626142 94626336 -105003814 + AluSx SINE Alu 140 312 0 186 296 45 57 chr5 94626607 94626695 -105003455 - MIR3 SINE MIR -12 196 110 33 25 0 0 chr5 94626752 94626792 -105003358 + AT_rich Low_complexity Low_complexity 1 40 0 769 145 0 0 chr5 94626792 94626909 -105003241 - FLAM_C SINE Alu -15 118 2 425 197 22 45 chr5 94627077 94627255 -105002895 + T-rich Low_complexity Low_complexity 1 174 0 199 310 141 63 chr5 94627419 94627561 -105002589 - MIR3 SINE MIR -14 194 42 4296 150 24 0 chr5 94627564 94628286 -105001864 - L1PA16 LINE L1 0 6166 5428 271 70 0 0 chr5 94628317 94628360 -105001790 - L1PA16 LINE L1 -723 5443 5401 1152 182 26 93 chr5 94628582 94628884 -105001266 + MLT1C LTR MaLR 1 282 -185 2003 173 62 21 chr5 94628886 94628923 -105001227 - MSTB LTR MaLR -4 453 419 1595 170 0 71 chr5 94628923 94629259 -105000891 + AluJo SINE Alu 1 312 0 2003 173 62 21 chr5 94629259 94629648 -105000502 - MSTB LTR MaLR -38 419 1 605 202 69 35 chr5 94629654 94629827 -105000323 + MLT1C LTR MaLR 285 463 -4 207 69 0 0 chr5 94630304 94630333 -104999817 + (A)n Simple_repeat Simple_repeat 1 29 0 1484 162 53 4 chr5 94630562 94630809 -104999341 - AluJb SINE Alu -45 267 9 2371 77 10 0 chr5 94630866 94631163 -104998987 + AluSx SINE Alu 3 302 -10 2393 98 3 0 chr5 94631967 94632274 -104997876 + AluSx SINE Alu 1 308 -4 248 352 45 0 chr5 94632349 94632437 -104997713 - MER5A DNA MER1_type -90 99 8 1778 161 7 10 chr5 94632570 94632862 -104997288 + AluJb SINE Alu 3 293 -19 829 178 68 6 chr5 94633366 94633529 -104996621 + AluJo SINE Alu 24 196 -116 2067 123 0 0 chr5 94633741 94634017 -104996133 - AluSx SINE Alu -11 301 26 1703 169 20 7 chr5 94634157 94634452 -104995698 + AluJo SINE Alu 2 300 -12 1926 159 3 0 chr5 94634739 94635034 -104995116 + AluJb SINE Alu 1 296 -16 1163 171 24 14 chr5 94635164 94635374 -104994776 + AluJo SINE Alu 3 214 -98 198 0 0 0 chr5 94636549 94636571 -104993579 + (CAA)n Simple_repeat Simple_repeat 3 24 0 29 0 0 0 chr5 94637079 94637108 -104993042 + AT_rich Low_complexity Low_complexity 1 29 0 180 125 0 0 chr5 94637267 94637299 -104992851 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 213 94 0 0 chr5 94637793 94637825 -104992325 + (A)n Simple_repeat Simple_repeat 1 32 0 286 378 58 29 chr5 94639783 94639955 -104990195 + L2 LINE L2 2997 3173 -99 1672 173 37 13 chr5 94641392 94641692 -104988458 + AluJb SINE Alu 1 307 -5 22 0 0 0 chr5 94644321 94644343 -104985807 + AT_rich Low_complexity Low_complexity 1 22 0 357 272 114 44 chr5 94645775 94645933 -104984217 + MIR SINE MIR 10 178 -84 28 61 0 0 chr5 94646250 94646299 -104983851 + AT_rich Low_complexity Low_complexity 1 49 0 204 40 0 0 chr5 94647129 94647154 -104982996 + (CCG)n Simple_repeat Simple_repeat 2 26 0 189 0 0 0 chr5 94650339 94650360 -104979790 + (CCGCG)n Simple_repeat Simple_repeat 1 21 0 21 57 0 0 chr5 94652236 94652271 -104977879 + AT_rich Low_complexity Low_complexity 1 35 0 2086 125 0 3 chr5 94652568 94652863 -104977287 - AluSx SINE Alu -18 294 1 216 0 0 0 chr5 94652885 94652909 -104977241 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 24 0 0 0 chr5 94653591 94653615 -104976535 + AT_rich Low_complexity Low_complexity 1 24 0 359 82 14 110 chr5 94654116 94654189 -104975961 - L1ME4a LINE L1 -82 6039 5974 580 167 0 0 chr5 94654430 94654520 -104975630 + AluJ SINE Alu 200 289 -23 1461 126 133 42 chr5 94654521 94654807 -104975343 - AluSx SINE Alu 0 312 1 4283 126 21 3 chr5 94654992 94655646 -104974504 - L1PA16 LINE L1 -9 6157 5489 2176 122 20 0 chr5 94655646 94655950 -104974200 - AluSx SINE Alu -2 310 1 4283 126 21 3 chr5 94655950 94655970 -104974180 - L1PA16 LINE L1 -677 5489 5471 3252 82 18 2 chr5 94656397 94656850 -104973300 + L1PA13 LINE L1 5701 6160 -3 2026 131 3 16 chr5 94656850 94657163 -104972987 + AluSx SINE Alu 1 309 -3 2216 101 10 13 chr5 94657360 94657666 -104972484 - AluSx SINE Alu -7 305 1 24 0 0 0 chr5 94658271 94658295 -104971855 + AT_rich Low_complexity Low_complexity 1 24 0 1946 116 10 40 chr5 94658496 94658799 -104971351 - AluSq SINE Alu -19 294 1 477 282 153 0 chr5 94659575 94659738 -104970412 - MIR SINE MIR -24 238 51 290 292 135 82 chr5 94659796 94660063 -104970087 + L2 LINE L2 3023 3303 -10 2075 99 3 25 chr5 94660348 94660662 -104969488 + AluSp SINE Alu 1 307 -6 55 50 0 10 chr5 94661095 94661163 -104968987 + AT_rich Low_complexity Low_complexity 1 69 -31 2058 124 3 10 chr5 94661163 94661462 -104968688 - AluSg SINE Alu -13 297 1 55 50 0 10 chr5 94661462 94661494 -104968656 + AT_rich Low_complexity Low_complexity 69 100 0 343 227 128 21 chr5 94661554 94661695 -104968455 - L2 LINE L2 -825 2489 2334 797 258 166 3 chr5 94661759 94662085 -104968065 - L1MC4 LINE L1 -141 7901 7523 540 206 14 41 chr5 94662108 94662160 -104967990 + MER105 DNA DNA 6 58 -146 1460 208 47 98 chr5 94662160 94662708 -104967442 - MLT2B1 LTR ERVL 0 520 1 540 206 14 41 chr5 94662708 94662801 -104967349 + MER105 DNA DNA 58 147 -57 523 249 111 48 chr5 94662840 94663652 -104966498 - L1MC4 LINE L1 -569 7473 6459 1236 129 330 7 chr5 94663909 94664203 -104965947 - MER61B LTR ERV1 -36 389 1 272 340 121 56 chr5 94664347 94664994 -104965156 - L2 LINE L2 -1660 1654 966 2170 125 3 7 chr5 94665377 94665682 -104964468 + AluSx SINE Alu 1 304 -8 2294 97 0 38 chr5 94666998 94667317 -104962833 - AluSg SINE Alu -3 307 1 1749 177 19 35 chr5 94667396 94667764 -104962386 - MLT1A1 LTR MaLR 0 365 4 2053 131 0 0 chr5 94668358 94668667 -104961483 - AluSx SINE Alu 0 311 3 274 311 101 0 chr5 94669572 94669691 -104960459 + MIR SINE MIR 62 192 -70 34 0 0 0 chr5 94669845 94669879 -104960271 + AT_rich Low_complexity Low_complexity 1 34 0 684 175 35 0 chr5 94669879 94669993 -104960157 - FLAM_C SINE Alu -15 118 1 1201 276 59 24 chr5 94671087 94671565 -104958585 - L1MC4a LINE L1 -1785 6023 5520 1256 224 55 21 chr5 94671565 94671855 -104958295 + AluJo SINE Alu 1 300 -12 1201 276 59 24 chr5 94671855 94671955 -104958195 - L1MC4a LINE L1 -2288 5520 5425 287 255 0 51 chr5 94672034 94672132 -104958018 - L1MC4 LINE L1 -151 7891 7799 1139 103 73 44 chr5 94672141 94672265 -104957885 + MER2 DNA MER2_type 1 135 -210 1532 106 60 0 chr5 94672265 94672482 -104957668 + MER30 DNA MER1_type 1 230 0 1139 103 73 44 chr5 94672482 94672561 -104957589 + MER2 DNA MER2_type 135 210 -135 21 57 0 0 chr5 94672561 94672596 -104957554 + AT_rich Low_complexity Low_complexity 1 35 0 1731 242 44 12 chr5 94672661 94673166 -104956984 - L1MC4 LINE L1 -258 7784 7264 1544 269 24 29 chr5 94673204 94673502 -104956648 - L1MC4a LINE L1 -813 6995 6700 2092 126 33 0 chr5 94673502 94673804 -104956346 + AluSx SINE Alu 1 312 0 1544 269 24 29 chr5 94673804 94674059 -104956091 - L1MC4a LINE L1 -1108 6700 6445 557 244 44 58 chr5 94674452 94674677 -104955473 - L2 LINE L2 0 3313 3092 313 286 130 32 chr5 94675024 94675178 -104954972 - MIR SINE MIR -74 188 20 349 301 8 0 chr5 94676174 94676297 -104953853 + MER117 DNA MER1_type 40 163 -34 4548 134 69 36 chr5 94676497 94676572 -104953578 - MER6 DNA MER2_type 0 865 794 2009 119 11 3 chr5 94676572 94676857 -104953293 + AluSx SINE Alu 1 287 -25 4548 134 69 36 chr5 94676857 94677617 -104952533 - MER6 DNA MER2_type -71 794 2 288 187 37 32 chr5 94677989 94678099 -104952051 + MIR SINE MIR 106 262 0 289 206 0 27 chr5 94678194 94678267 -104951883 + L1MC4a LINE L1 5843 5913 -1895 2115 128 6 6 chr5 94678881 94679193 -104950957 - AluJb SINE Alu 0 312 1 610 333 106 16 chr5 94680085 94680254 -104949896 + HAL1 LINE L1 1128 1280 -1227 1983 160 0 0 chr5 94680254 94680561 -104949589 + AluJo SINE Alu 1 307 -5 610 333 106 16 chr5 94680561 94680779 -104949371 + HAL1 LINE L1 1280 1550 -957 766 208 20 61 chr5 94680802 94680999 -104949151 - MIR SINE MIR -51 211 23 336 297 42 17 chr5 94681495 94681734 -104948416 + L1ME LINE L1 4804 5048 -1098 1813 167 13 0 chr5 94681994 94682293 -104947857 + AluJo SINE Alu 1 303 -9 324 318 45 0 chr5 94682336 94682490 -104947660 + L1ME LINE L1 5387 5547 -617 232 255 181 16 chr5 94682530 94682718 -104947432 + L1ME LINE L1 5666 5884 -278 2402 115 0 0 chr5 94682967 94683280 -104946870 - AluSq SINE Alu 0 313 1 2290 92 7 3 chr5 94683652 94683957 -104946193 - AluSx SINE Alu -6 306 1 216 67 0 0 chr5 94684352 94684382 -104945768 + (CAAAC)n Simple_repeat Simple_repeat 2 31 0 234 0 0 0 chr5 94684916 94684942 -104945208 + (CA)n Simple_repeat Simple_repeat 2 27 0 * 309 26 0 0 chr5 94684941 94684979 -104945171 + (TC)n Simple_repeat Simple_repeat 2 39 0 921 296 25 3 chr5 94685475 94685796 -104944354 + MLT1I LTR MaLR 63 390 -19 26 0 0 0 chr5 94686641 94686667 -104943483 + AT_rich Low_complexity Low_complexity 1 26 0 3450 52 0 37 chr5 94687009 94687468 -104942682 + L1PA5 LINE L1 5713 6154 0 1787 156 24 6 chr5 94687985 94688324 -104941826 - L1PA16 LINE L1 -16 6150 5806 248 224 15 90 chr5 94688457 94688524 -104941626 + L2 LINE L2 3229 3290 -23 489 34 0 0 chr5 94688540 94688599 -104941551 + (CA)n Simple_repeat Simple_repeat 2 60 0 631 259 47 10 chr5 94688754 94688947 -104941203 - MIR SINE MIR -10 252 53 183 133 0 0 chr5 94688991 94689021 -104941129 - L2 LINE L2 0 3313 3284 492 312 41 38 chr5 94689091 94689357 -104940793 + L2 LINE L2 2217 2483 -831 530 299 132 51 chr5 94689385 94689856 -104940294 + L2 LINE L2 2805 3313 0 257 284 15 0 chr5 94689956 94690023 -104940127 + L2 LINE L2 3244 3311 -2 1684 186 3 36 chr5 94690217 94690523 -104939627 - AluJo SINE Alu -16 296 1 567 192 100 8 chr5 94690554 94690674 -104939476 + FLAM_C SINE Alu 3 133 -10 355 113 0 0 chr5 94690794 94690847 -104939303 - MER66A LTR ERV1 -140 338 286 2257 109 20 3 chr5 94690943 94691246 -104938904 - AluSx SINE Alu -4 308 1 1683 182 43 3 chr5 94691572 94691896 -104938254 + MER58B DNA MER1_type 1 337 -4 738 230 259 6 chr5 94691973 94692286 -104937864 + LTR16C LTR ERVL 100 491 0 1777 142 0 73 chr5 94693205 94693522 -104936628 + AluJb SINE Alu 1 294 -18 932 102 25 32 chr5 94693523 94693611 -104936539 + L1MA2 LINE L1 6148 6236 -68 2306 136 23 0 chr5 94693611 94693963 -104936187 - THE1B LTR MaLR -2 362 3 932 102 25 32 chr5 94693963 94694031 -104936119 + L1MA2 LINE L1 6236 6303 -1 211 213 0 0 chr5 94694288 94694335 -104935815 + GA-rich Low_complexity Low_complexity 3 49 0 617 261 106 9 chr5 94694335 94694553 -104935597 + MIR SINE MIR 20 258 -4 578 217 80 7 chr5 94694683 94694821 -104935329 - MLT1H1 LTR MaLR -405 150 3 303 297 68 40 chr5 94694828 94694976 -104935174 - MLT1H1-int LTR MaLR -5 1366 1215 911 208 0 12 chr5 94695158 94695326 -104934824 + FAM SINE Alu 1 166 -9 945 242 121 23 chr5 94695385 94695926 -104934224 + MLT1E2 LTR MaLR 1 616 -10 232 283 31 102 chr5 94696538 94696863 -104933287 - MLT1H1-int LTR MaLR -768 603 302 1635 280 35 18 chr5 94697041 94697188 -104932962 - MLT1H1 LTR MaLR 0 555 412 2268 88 0 3 chr5 94697188 94697496 -104932654 + AluY SINE Alu 1 307 0 1635 280 35 18 chr5 94697496 94697893 -104932257 - MLT1H1 LTR MaLR -143 412 1 414 253 45 81 chr5 94698112 94698310 -104931840 + MIR SINE MIR 18 208 -54 489 214 134 55 chr5 94698332 94698533 -104931617 + MER112 DNA MER1_type 28 244 -16 469 242 196 8 chr5 94698783 94699043 -104931107 + MER113 DNA MER1_type? 118 426 -95 649 231 16 71 chr5 94699303 94699365 -104930785 - MER5B DNA MER1_type -6 172 108 2344 62 0 33 chr5 94699365 94699671 -104930479 - AluY SINE Alu -15 296 1 649 231 16 71 chr5 94699671 94699790 -104930360 - MER5B DNA MER1_type -70 108 1 24 32 0 0 chr5 94700070 94700101 -104930049 + AT_rich Low_complexity Low_complexity 1 31 0 1995 91 4 0 chr5 94700104 94700357 -104929793 - AluSg SINE Alu -48 262 9 1607 126 57 68 chr5 94700578 94700944 -104929206 + THE1C LTR MaLR 14 375 0 435 264 164 0 chr5 94701367 94701526 -104928624 + MER69 DNA AcHobo 365 549 -1977 * 887 223 18 19 chr5 94701525 94701907 -104928243 + MER69 DNA AcHobo 2022 2459 -67 2037 148 26 8 chr5 94704118 94704496 -104925654 - MLT1B LTR MaLR -5 385 1 575 246 15 8 chr5 94705155 94705285 -104924865 + FLAM_C SINE Alu 1 131 -12 1667 150 93 32 chr5 94706041 94706321 -104923829 + AluSx SINE Alu 1 297 -15 496 243 41 96 chr5 94706962 94707180 -104922970 + LTR67 LTR ERVL 29 234 -323 611 190 118 24 chr5 94707431 94707642 -104922508 - L1ME1 LINE L1 -18 6148 5918 234 109 16 125 chr5 94707700 94707721 -104922429 + LTR67 LTR ERVL 482 504 -53 664 262 48 28 chr5 94707721 94707973 -104922177 - MIR SINE MIR -2 260 4 234 109 16 125 chr5 94707973 94708015 -104922135 + LTR67 LTR ERVL 504 538 -19 202 277 152 82 chr5 94708295 94708572 -104921578 - L2 LINE L2 -251 3062 2780 235 389 28 19 chr5 94709013 94709121 -104921029 - MIR SINE MIR -66 142 34 885 235 11 11 chr5 94711043 94711218 -104918932 - MER5A DNA MER1_type 0 189 15 2475 88 0 0 chr5 94711218 94711524 -104918626 - AluY SINE Alu -5 306 1 1741 153 3 68 chr5 94711524 94711845 -104918305 - AluJb SINE Alu -12 300 1 894 113 75 6 chr5 94711870 94712029 -104918121 + MER4A LTR ERV1 1 170 -494 1907 128 0 14 chr5 94712046 94712343 -104917807 + MER4A LTR ERV1 372 664 0 25 0 0 0 chr5 94712495 94712520 -104917630 + GC_rich Low_complexity Low_complexity 1 25 0 12990 119 21 4 chr5 94712817 94714767 -104915383 - HUERS-P3 LTR ERV1 -2817 6102 4120 2870 93 39 11 chr5 94715014 94715454 -104914696 + L1PB1 LINE L1 5700 6151 0 1995 198 37 9 chr5 94715627 94716081 -104914069 + MLT1C LTR MaLR 1 467 0 22 0 0 0 chr5 94716273 94716295 -104913855 + AT_rich Low_complexity Low_complexity 1 22 0 444 228 29 131 chr5 94716873 94717079 -104913071 - MER91B DNA MER1_type -4 186 2 758 159 31 18 chr5 94717462 94717625 -104912525 + MSTC LTR MaLR 9 173 -255 21 0 0 0 chr5 94717930 94717951 -104912199 + AT_rich Low_complexity Low_complexity 1 21 0 1032 261 109 12 chr5 94718140 94718663 -104911487 - MLT1G1 LTR MaLR 0 595 3 420 322 23 6 chr5 94719626 94719803 -104910347 - MLT1-int LTR MaLR -795 576 397 259 347 27 7 chr5 94719886 94720033 -104910117 - MLT1-int LTR MaLR -1221 150 1 673 254 188 12 chr5 94720174 94720493 -104909657 - MLT1G1 LTR MaLR -220 375 1 1430 83 23 5 chr5 94720517 94720733 -104909417 + L1MA5A LINE L1 6077 6296 -1 214 315 177 23 chr5 94721270 94721400 -104908750 + L2 LINE L2 3119 3268 -4 21 36 0 0 chr5 94721907 94721935 -104908215 + AT_rich Low_complexity Low_complexity 1 28 0 243 182 23 0 chr5 94721938 94721982 -104908168 + MLT1F LTR MaLR 1 45 -497 1647 235 80 20 chr5 94721995 94722498 -104907652 + MLT1F LTR MaLR 10 542 0 221 179 0 0 chr5 94723751 94723790 -104906360 - L2 LINE L2 -12 3260 3222 774 146 0 0 chr5 94723877 94724000 -104906150 - L1MB3 LINE L1 -7 6176 6054 505 283 82 13 chr5 94724504 94724663 -104905487 - MIR SINE MIR -77 185 16 454 278 52 25 chr5 94724883 94725093 -104905057 - MER91B DNA MER1_type -6 190 1 1794 176 23 43 chr5 94725122 94725520 -104904630 + MLT1B LTR MaLR 1 390 0 217 222 0 32 chr5 94725594 94725657 -104904493 + (CA)n Simple_repeat Simple_repeat 2 62 0 200 286 0 0 chr5 94725669 94725718 -104904432 + GA-rich Low_complexity Low_complexity 2 50 0 26 30 0 0 chr5 94725768 94725801 -104904349 + AT_rich Low_complexity Low_complexity 1 33 0 2100 98 25 0 chr5 94725801 94726078 -104904072 - AluSx SINE Alu -18 294 11 362 261 162 7 chr5 94726167 94726309 -104903841 + L2 LINE L2 3150 3313 0 444 217 56 50 chr5 94726943 94727104 -104903046 - MIR SINE MIR -23 239 78 363 271 29 18 chr5 94727130 94727300 -104902850 - L1ME4a LINE L1 0 6121 5950 2083 104 67 6 chr5 94727327 94727654 -104902496 + MER7A DNA MER2_type 1 345 -1 24 0 0 0 chr5 94727749 94727773 -104902377 + AT_rich Low_complexity Low_complexity 1 24 0 15295 176 17 34 chr5 94727836 94728669 -104901481 + L1PA14 LINE L1 2257 3102 -3059 1744 132 23 0 chr5 94728669 94728926 -104901224 + AluSq SINE Alu 11 273 -40 15295 176 17 34 chr5 94728926 94731162 -104898988 + L1PA14 LINE L1 3102 5373 -788 2524 63 0 0 chr5 94731162 94731461 -104898689 + AluY SINE Alu 1 299 -12 15295 176 17 34 chr5 94731461 94731537 -104898613 + L1PA14 LINE L1 5373 5449 -712 2292 105 0 9 chr5 94731537 94731852 -104898298 + AluSx SINE Alu 1 312 0 15295 176 17 34 chr5 94731852 94732619 -104897531 + L1PA14 LINE L1 5449 6155 -6 2167 113 7 0 chr5 94732722 94733013 -104897137 - AluSx SINE Alu -17 295 3 373 211 10 10 chr5 94733330 94733434 -104896716 + CT-rich Low_complexity Low_complexity 2 105 0 2227 99 0 3 chr5 94733920 94734212 -104895938 - AluSx SINE Alu -21 291 1 23 33 0 0 chr5 94735101 94735131 -104895019 + AT_rich Low_complexity Low_complexity 1 30 0 684 124 62 18 chr5 94735132 94735245 -104894905 - FLAM_C SINE Alu -20 123 6 29 78 0 0 chr5 94735302 94735366 -104894784 + AT_rich Low_complexity Low_complexity 1 64 0 320 266 191 27 chr5 94736004 94736192 -104893958 - L2 LINE L2 -786 2528 2310 207 0 0 0 chr5 94736326 94736349 -104893801 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 236 204 41 0 chr5 94736901 94736950 -104893200 + L3b LINE CR1 1299 1349 -234 188 325 12 12 chr5 94737020 94737100 -104893050 + L3b LINE CR1 1348 1427 -156 333 234 19 65 chr5 94738283 94738390 -104891760 - MIR SINE MIR -9 253 152 961 240 49 0 chr5 94738685 94738910 -104891240 + MIR SINE MIR 16 251 -11 279 293 43 14 chr5 94744627 94744767 -104885383 + L1ME3 LINE L1 5423 5566 -596 373 226 88 29 chr5 94744867 94744969 -104885181 - MER81 DNA DNA -5 109 2 512 289 99 41 chr5 94745068 94745410 -104884740 + L1ME3 LINE L1 5536 5897 -265 28 61 0 0 chr5 94745643 94745692 -104884458 + AT_rich Low_complexity Low_complexity 1 49 0 266 276 86 98 chr5 94745768 94745942 -104884208 - L2 LINE L2 -6 3307 3136 1931 158 3 3 chr5 94745984 94746282 -104883868 + AluSx SINE Alu 3 300 -12 349 256 107 36 chr5 94746314 94746482 -104883668 - L2 LINE L2 -189 3124 2945 2334 71 0 3 chr5 94746761 94747107 -104883043 + AluY SINE Alu 2 346 0 1532 318 125 17 chr5 94747313 94747714 -104882436 + L2 LINE L2 2239 2595 -718 4836 193 47 81 chr5 94747714 94749215 -104880935 + Charlie1a DNA MER1_type 5 1455 0 1532 318 125 17 chr5 94749215 94749771 -104880379 + L2 LINE L2 2595 3311 -2 397 263 91 86 chr5 94750652 94750775 -104879375 - MIR SINE MIR -10 252 126 2312 105 0 0 chr5 94750775 94751071 -104879079 + AluSx SINE Alu 3 298 -14 397 263 91 86 chr5 94751071 94751179 -104878971 - MIR SINE MIR -136 126 20 302 324 164 16 chr5 94752399 94752643 -104877507 + L3 LINE CR1 953 1232 -345 752 287 117 35 chr5 94754041 94754498 -104875652 + MLT1H1 LTR MaLR 65 555 0 264 358 117 30 chr5 94755086 94755385 -104874765 + L2 LINE L2 2858 3182 -131 238 322 14 103 chr5 94755491 94755637 -104874513 + L2 LINE L2 3179 3311 -2 25 0 0 0 chr5 94755928 94755953 -104874197 + AT_rich Low_complexity Low_complexity 1 25 0 288 265 32 37 chr5 94756235 94756364 -104873786 + MLT1I LTR MaLR 20 148 -261 204 333 9 54 chr5 94758341 94758452 -104871698 - MIR3 SINE MIR -3 205 100 195 239 22 0 chr5 94758549 94758595 -104871555 + L2 LINE L2 3267 3313 0 1666 170 32 29 chr5 94758699 94759010 -104871140 - AluJb SINE Alu 0 312 1 1202 158 143 66 chr5 94760596 94760882 -104869268 + AluJo SINE Alu 6 311 0 1177 194 104 123 chr5 94761790 94762270 -104867880 - MLT1D LTR MaLR 0 505 35 209 325 42 67 chr5 94762509 94762629 -104867521 - MER91A DNA MER1_type -12 184 68 2141 136 45 0 chr5 94763475 94763807 -104866343 - MER7A DNA MER2_type 0 346 2 469 307 38 51 chr5 94764024 94764337 -104865813 - MLT1K LTR MaLR -3 585 277 419 224 103 0 chr5 94764515 94764622 -104865528 - MER96B DNA MER1_type? -2 415 298 364 383 74 9 chr5 94765823 94766053 -104864097 - MIR SINE MIR -17 245 1 2128 122 0 0 chr5 94766219 94766514 -104863636 - AluSx SINE Alu -16 296 2 186 288 96 14 chr5 94766871 94766944 -104863206 + L2 LINE L2 1351 1429 -1885 688 205 154 6 chr5 94768547 94768703 -104861447 + MER5A DNA MER1_type 9 187 -2 317 266 156 0 chr5 94770995 94771104 -104859046 - L2 LINE L2 0 3313 3188 348 193 80 0 chr5 94771106 94771194 -104858956 - MIR SINE MIR 0 262 168 414 0 0 0 chr5 94771390 94771436 -104858714 + (CA)n Simple_repeat Simple_repeat 1 46 0 378 348 6 22 chr5 94771595 94771773 -104858377 + MER5A DNA MER1_type 13 187 -2 465 305 46 64 chr5 94772237 94772519 -104857631 - MLT1I LTR MaLR -2 407 131 292 290 86 0 chr5 94773034 94773127 -104857023 - L2 LINE L2 -37 3276 3176 * 295 302 62 0 chr5 94773122 94773218 -104856932 - MIR SINE MIR 0 262 161 249 206 96 0 chr5 94773316 94773389 -104856761 - MER116 DNA Mariner 0 80 1 869 146 7 28 chr5 94773529 94773673 -104856477 - MLT1D LTR MaLR -364 141 1 320 364 30 6 chr5 94773682 94773847 -104856303 - MIR SINE MIR -87 175 7 2346 78 3 0 chr5 94774071 94774367 -104855783 - AluY SINE Alu -11 300 4 1835 168 0 3 chr5 94774508 94774806 -104855344 - AluSx SINE Alu -15 297 1 201 250 23 23 chr5 94774819 94774907 -104855243 + (TA)n Simple_repeat Simple_repeat 1 88 0 2261 101 3 0 chr5 94775324 94775620 -104854530 - AluSq SINE Alu -16 297 1 219 350 105 31 chr5 94775661 94775859 -104854291 - L2 LINE L2 -597 2717 2494 848 34 188 0 chr5 94775859 94775976 -104854174 + MER85 DNA T2_type 1 139 0 219 350 105 31 chr5 94775976 94776034 -104854116 - L2 LINE L2 -820 2494 2442 536 292 93 18 chr5 94777443 94777907 -104852243 - L1ME4a LINE L1 -293 5828 5333 290 34 0 0 chr5 94777969 94778008 -104852142 + L1PA6 LINE L1 6107 6146 -9 316 214 119 12 chr5 94778008 94778092 -104852058 - L1MC4 LINE L1 -1340 6702 6610 492 347 27 0 chr5 94779848 94779998 -104850152 - L2 LINE L2 -3 3269 3116 4282 158 37 14 chr5 94780103 94781063 -104849087 - L1MA8 LINE L1 -181 6110 5127 376 318 133 9 chr5 94781131 94781356 -104848794 - MIR SINE MIR -6 256 1 23 0 0 0 chr5 94781733 94781756 -104848394 + AT_rich Low_complexity Low_complexity 1 23 0 183 42 0 0 chr5 94782875 94782899 -104847251 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 281 195 0 26 chr5 94783174 94783251 -104846899 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 25 0 0 0 chr5 94783335 94783360 -104846790 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 94783469 94783491 -104846659 + AT_rich Low_complexity Low_complexity 1 22 0 1200 287 103 32 chr5 94784259 94784852 -104845298 - L2 LINE L2 -7 3306 2677 1029 301 119 23 chr5 94785103 94785488 -104844662 - MER115 DNA AcHobo 0 693 272 434 330 91 26 chr5 94785488 94785718 -104844432 + LTR16A LTR ERVL 1 245 -205 2026 111 0 21 chr5 94786145 94786465 -104843685 - AluSx SINE Alu 0 314 1 527 280 61 67 chr5 94786617 94787257 -104842893 + L1ME3A LINE L1 4349 4984 -1162 466 104 0 0 chr5 94787282 94787349 -104842801 + AluSg SINE Alu 1 67 -242 1777 98 0 0 chr5 94787415 94787649 -104842501 + AluSg SINE Alu 75 308 -2 349 304 46 36 chr5 94787692 94787886 -104842264 + L1ME3A LINE L1 5078 5273 -873 963 255 67 88 chr5 94787893 94788563 -104841587 + L1ME3A LINE L1 5296 5951 -219 250 330 64 64 chr5 94788843 94789031 -104841119 - MLT1J LTR MaLR -100 411 224 334 275 29 76 chr5 94789252 94789370 -104840780 - HAL1 LINE L1 -809 1698 1589 2664 56 0 0 chr5 94789370 94789709 -104840441 + L1PA13 LINE L1 5824 6162 -1 334 275 29 76 chr5 94789709 94789761 -104840389 - HAL1 LINE L1 -918 1589 1536 21 36 0 0 chr5 94789931 94789959 -104840191 + AT_rich Low_complexity Low_complexity 1 28 0 336 353 62 47 chr5 94790062 94790320 -104839830 - L1MEd LINE L1 -4938 1181 920 329 304 44 62 chr5 94790375 94790648 -104839502 - HAL1 LINE L1 -1429 1078 811 2208 90 0 35 chr5 94791104 94791414 -104838736 + AluSg SINE Alu 1 299 -11 1977 233 44 41 chr5 94791495 94792083 -104838067 - HsTC2a DNA Tc2 -151 593 4 1244 176 109 35 chr5 94794556 94794840 -104835310 - AluJo SINE Alu -7 305 1 314 342 65 33 chr5 94795614 94795798 -104834352 + L2 LINE L2 2838 3027 -245 305 254 0 0 chr5 94795903 94795966 -104834184 + L2 LINE L2 3210 3272 0 2192 118 30 35 chr5 94795979 94796345 -104833805 - THE1B LTR MaLR 0 364 1 1024 326 72 40 chr5 94797510 94798007 -104832143 + MLT1K LTR MaLR 66 578 -10 259 242 0 15 chr5 94798005 94798071 -104832079 + MLT1K LTR MaLR 521 585 -3 * 1909 115 15 0 chr5 94798228 94798498 -104831652 + AluSx SINE Alu 3 276 -36 2179 116 0 0 chr5 94798498 94798789 -104831361 + AluSc SINE Alu 4 295 -14 181 333 0 23 chr5 94800011 94800098 -104830052 + L2 LINE L2 2911 2995 -277 220 231 90 64 chr5 94801525 94801603 -104828547 + L2 LINE L2 3234 3313 0 237 132 0 0 chr5 94802219 94802257 -104827893 + (TA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr5 94803037 94803058 -104827092 + AT_rich Low_complexity Low_complexity 1 21 0 364 311 121 0 chr5 94803414 94803546 -104826604 + L2 LINE L2 3116 3263 -9 * 1064 237 18 0 chr5 94803529 94803748 -104826402 - MIR SINE MIR -6 256 34 328 292 134 12 chr5 94803896 94803971 -104826179 - MIR SINE MIR -5 257 193 321 26 0 0 chr5 94803971 94804009 -104826141 + (TG)n Simple_repeat Simple_repeat 1 38 0 328 292 134 12 chr5 94804009 94804065 -104826085 - MIR SINE MIR -69 193 145 2327 97 0 0 chr5 94804065 94804364 -104825786 + AluSx SINE Alu 1 299 -13 328 292 134 12 chr5 94804364 94804440 -104825710 - MIR SINE MIR -117 145 21 207 0 0 0 chr5 94805405 94805428 -104824722 + (CA)n Simple_repeat Simple_repeat 1 23 0 477 160 59 42 chr5 94805539 94805658 -104824492 - L1MB4 LINE L1 -1 6179 6059 2695 155 43 75 chr5 94805756 94805890 -104824260 - L1MB4 LINE L1 -118 6062 5925 1224 272 28 25 chr5 94805890 94806254 -104823896 + MLT1A1 LTR MaLR 1 365 0 2695 155 43 75 chr5 94806254 94806478 -104823672 - L1MB4 LINE L1 -255 5925 5695 2571 117 5 8 chr5 94806478 94806854 -104823296 + THE1C LTR MaLR 1 375 0 2695 155 43 75 chr5 94806854 94807125 -104823025 - L1MB4 LINE L1 -485 5695 5452 270 0 0 0 chr5 94807553 94807583 -104822567 + (CA)n Simple_repeat Simple_repeat 2 31 0 297 252 108 36 chr5 94808781 94808920 -104821230 - MIR SINE MIR -50 212 64 272 281 0 0 chr5 94809848 94809912 -104820238 - L2 LINE L2 -2 3311 3248 1666 228 43 42 chr5 94809933 94810463 -104819687 - L1M4c LINE L1 -2140 4504 3974 342 98 0 0 chr5 94810479 94810530 -104819620 + (TCC)n Simple_repeat Simple_repeat 1 51 0 792 178 25 136 chr5 94810530 94810772 -104819378 - AluJo SINE Alu -11 301 87 3939 244 50 50 chr5 94810779 94811710 -104818440 - L1M4c LINE L1 -2704 3940 3010 2024 177 57 26 chr5 94811710 94812129 -104818021 - MSTB1 LTR MaLR 0 432 1 3939 244 50 50 chr5 94812129 94812359 -104817791 - L1M4c LINE L1 -3634 3010 2781 6841 67 6 7 chr5 94812359 94813944 -104816206 - L1PA7 LINE L1 0 6154 4571 3939 244 50 50 chr5 94813944 94815240 -104814910 - L1M4c LINE L1 -3863 2781 1371 1069 191 66 48 chr5 94815252 94815524 -104814626 - L1M4c LINE L1 -5346 1196 920 3486 194 9 23 chr5 94815526 94816308 -104813842 + L1 LINE L1 4160 4930 -1216 1664 166 11 55 chr5 94816340 94816702 -104813448 + L1PB4 LINE L1 3581 3926 -2220 * 2602 150 5 2 chr5 94816698 94817124 -104813026 - L1PBa LINE L1 -5043 1820 1394 2322 160 31 8 chr5 94817124 94817506 -104812644 - MSTB LTR MaLR -35 391 1 4612 159 11 12 chr5 94817506 94818332 -104811818 + L1PB4 LINE L1 5332 6156 0 833 159 95 19 chr5 94818345 94818585 -104811565 - MLT2B1 LTR ERVL -164 250 1 1839 164 3 3 chr5 94819504 94819808 -104810342 - AluJb SINE Alu -8 304 1 1866 186 54 77 chr5 94819861 94820303 -104809847 + MLT1C-int LTR MaLR 940 1371 0 1758 219 64 18 chr5 94820308 94820746 -104809404 + MLT1C LTR MaLR 6 463 -4 558 161 6 31 chr5 94821275 94821436 -104808714 + (TA)n Simple_repeat Simple_repeat 1 157 0 214 354 19 86 chr5 94821563 94821772 -104808378 + L2 LINE L2 2964 3158 -114 472 232 18 49 chr5 94821838 94822002 -104808148 - L1MA10 LINE L1 0 6334 6176 24054 67 6 4 chr5 94822077 94828224 -104801926 + L1PA5 LINE L1 1 6154 0 494 228 44 22 chr5 94828448 94828584 -104801566 + MER104 DNA Tc2 1 139 -41 2580 201 34 2 chr5 94828951 94829483 -104800667 + L1PB1 LINE L1 3 551 -6312 4023 129 21 5 chr5 94829507 94830671 -104799479 + L1PB1 LINE L1 607 1971 -4892 14661 198 11 8 chr5 94830685 94830991 -104799159 + L1PB1 LINE L1 2460 2763 -4104 2260 124 31 6 chr5 94830991 94831345 -104798805 - THE1B LTR MaLR -1 363 1 10073 105 38 41 chr5 94831345 94832930 -104797220 - THE1B-int LTR MaLR 0 1580 1 2243 129 28 6 chr5 94832930 94833286 -104796864 - THE1B LTR MaLR 0 364 1 14661 198 11 8 chr5 94833286 94837369 -104792781 + L1PB1 LINE L1 2762 6866 -1 22 0 0 0 chr5 94837461 94837483 -104792667 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr5 94838306 94838347 -104791803 + AT_rich Low_complexity Low_complexity 1 41 0 897 270 87 40 chr5 94839203 94839629 -104790521 + MLT1J1 LTR MaLR 1 446 0 30 27 0 0 chr5 94840132 94840169 -104789981 + AT_rich Low_complexity Low_complexity 1 37 0 890 340 59 23 chr5 94840439 94840963 -104789187 - L2 LINE L2 -464 2850 2308 252 275 29 0 chr5 94841004 94841073 -104789077 - L2 LINE L2 -1001 2313 2243 204 284 37 37 chr5 94841072 94841153 -104788997 - MIR3 SINE MIR -17 191 111 * 799 126 0 15 chr5 94841349 94841484 -104788666 + FLAM_C SINE Alu 1 133 0 616 124 0 0 chr5 94841951 94842040 -104788110 - AluSg/x SINE Alu -23 287 199 2169 128 0 0 chr5 94842447 94842743 -104787407 + AluSx SINE Alu 1 296 -16 864 90 30 0 chr5 94842800 94842938 -104787212 - L1M2 LINE L1 -572 5582 5461 2343 102 26 8 chr5 94842939 94843291 -104786859 + L1P4 LINE L1 5307 5664 -499 1312 190 10 3 chr5 94843393 94843683 -104786467 - L1M2 LINE L1 -755 5391 5100 3212 141 11 11 chr5 94843684 94844251 -104785899 + L1PB3 LINE L1 5622 6188 0 333 200 42 0 chr5 94844953 94845048 -104785102 - L1MA8 LINE L1 -2 6289 6191 328 243 9 65 chr5 94845385 94845492 -104784658 - MER5A DNA MER1_type -69 120 20 456 256 55 24 chr5 94845525 94845689 -104784461 + L1ME3A LINE L1 5843 6011 -159 274 209 75 0 chr5 94846533 94846600 -104783550 - MER20B DNA MER1_type -5 214 143 266 250 24 24 chr5 94847730 94847814 -104782336 + CT-rich Low_complexity Low_complexity 1 84 0 30 27 0 0 chr5 94848116 94848153 -104781997 + AT_rich Low_complexity Low_complexity 1 37 0 2052 204 40 25 chr5 94849060 94849507 -104780643 + MER70A LTR ERVL 1 454 -18 356 214 12 24 chr5 94849598 94849682 -104780468 + AluJ/FLAM SINE Alu 1 83 -219 984 138 0 0 chr5 94849682 94849868 -104780282 + AluSq SINE Alu 139 324 0 1977 148 7 0 chr5 94849882 94850173 -104779977 + AluSx SINE Alu 3 295 -17 478 217 104 0 chr5 94850645 94850760 -104779390 - L1MC1 LINE L1 -2 6331 6205 238 292 76 76 chr5 94851242 94851413 -104778737 - MIR SINE MIR -2 260 90 444 313 28 44 chr5 94851484 94851666 -104778484 - MER20B DNA MER1_type -604 179 1 302 122 20 0 chr5 94851703 94851752 -104778398 - MSTD LTR MaLR -4 392 343 490 305 73 70 chr5 94851876 94852246 -104777904 + LTR67 LTR ERVL 1 371 -186 301 229 0 0 chr5 94852298 94852381 -104777769 - L1ME2 LINE L1 -5 6159 6077 708 190 25 85 chr5 94852405 94852605 -104777545 - MLT1E2 LTR MaLR -434 192 5 1699 230 109 36 chr5 94852609 94852963 -104777187 - L1MEc LINE L1 -3351 3590 3263 1464 178 3 48 chr5 94852963 94853256 -104776894 - AluJb SINE Alu -9 303 24 1699 230 109 36 chr5 94853256 94853540 -104776610 - L1MEc LINE L1 -3678 3263 2905 1356 186 19 40 chr5 94853552 94853874 -104776276 - L1MC1 LINE L1 -3 6330 6016 576 126 0 0 chr5 94853877 94853964 -104776186 - L1MC1 LINE L1 -806 5527 5441 866 178 0 0 chr5 94853965 94854111 -104776039 - AluJb SINE Alu -8 304 159 15331 151 53 50 chr5 94854160 94857195 -104772955 - MER57B-int LTR ERV1 -1329 6208 3160 1539 121 0 31 chr5 94857195 94857418 -104772732 + AluSg/x SINE Alu 89 304 -8 15331 151 53 50 chr5 94857418 94857800 -104772350 - MER57B-int LTR ERV1 -4377 3160 2781 732 138 0 32 chr5 94857796 94857919 -104772231 - MER57B-int LTR ERV1 -4908 2629 2511 * 4377 152 41 18 chr5 94857921 94858763 -104771387 - MER57B-int LTR ERV1 -4377 1452 639 * 6160 116 52 2 chr5 94858755 94859675 -104770475 - MER57B-int LTR ERV1 -6570 967 2 2602 144 16 2 chr5 94859676 94860100 -104770050 - MER57B LTR ERV1 0 434 5 1227 211 15 88 chr5 94860119 94860587 -104769563 - L1MEc LINE L1 -5248 1874 1441 940 267 27 27 chr5 94860588 94860918 -104769232 - L1MEc LINE L1 -5590 1532 1203 492 226 77 5 chr5 94860985 94861180 -104768970 - L1M4 LINE L1 -2658 3488 3280 546 326 94 30 chr5 94861230 94861668 -104768482 - L1MEc LINE L1 -5920 503 38 1984 115 37 57 chr5 94861902 94862285 -104767865 + THE1C LTR MaLR 1 375 0 750 311 57 13 chr5 94863453 94863879 -104766271 + LTR33 LTR ERVL 1 515 -6 297 426 50 8 chr5 94864495 94864737 -104765413 + L2 LINE L2 3016 3267 -5 279 314 50 16 chr5 94864730 94864851 -104765299 - MIR SINE MIR -137 125 1 * 181 250 0 0 chr5 94865982 94866018 -104764132 - MIR3 SINE MIR -5 203 168 245 97 97 0 chr5 94866502 94866605 -104763545 + (TA)n Simple_repeat Simple_repeat 1 113 0 1629 216 13 0 chr5 94866792 94867093 -104763057 - AluJo SINE Alu -7 305 1 924 255 19 11 chr5 94867116 94867432 -104762718 + MLT1A1 LTR MaLR 1 365 0 298 296 77 51 chr5 94868236 94868432 -104761718 + MLT1I LTR MaLR 177 377 -32 1845 175 71 29 chr5 94868456 94868989 -104761161 - MLT2A2 LTR ERVL -2 552 1 1245 137 100 7 chr5 94869037 94869307 -104760843 + L1MA7 LINE L1 5996 6290 -1 556 125 23 0 chr5 94869825 94869913 -104760237 - L1PA16 LINE L1 -200 5966 5877 411 56 0 0 chr5 94869913 94869967 -104760183 + L1PA16 LINE L1 6104 6157 -9 24 0 0 0 chr5 94873844 94873868 -104756282 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 94873963 94873985 -104756165 + AT_rich Low_complexity Low_complexity 1 22 0 273 228 18 0 chr5 94874937 94874994 -104755156 - MIR SINE MIR -101 107 50 237 211 0 0 chr5 94875147 94875199 -104754951 + GA-rich Low_complexity Low_complexity 2 53 0 234 0 0 0 chr5 94875202 94875228 -104754922 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr5 94877443 94877464 -104752686 + AT_rich Low_complexity Low_complexity 1 21 0 193 268 24 0 chr5 94878422 94878463 -104751687 + L2 LINE L2 3137 3178 -94 2028 123 166 0 chr5 94879416 94879783 -104750367 - MSTA LTR MaLR 0 428 1 294 296 21 81 chr5 94880372 94880587 -104749563 - MIR SINE MIR -31 231 32 2502 114 8 16 chr5 94880799 94881177 -104748973 - THE1C LTR MaLR 0 375 1 24 67 0 0 chr5 94881332 94881377 -104748773 + AT_rich Low_complexity Low_complexity 1 45 0 878 285 58 10 chr5 94881696 94882008 -104748142 - L2 LINE L2 0 3313 2987 22 70 0 0 chr5 94883411 94883454 -104746696 + AT_rich Low_complexity Low_complexity 1 43 0 10861 200 42 32 chr5 94884055 94884536 -104745614 - L1MC3 LINE L1 0 7785 7310 1193 167 182 37 chr5 94884536 94884860 -104745290 + MER93b LTR ERV1 1 371 -2 10861 200 42 32 chr5 94884860 94885036 -104745114 - L1MC3 LINE L1 -475 7310 7137 6760 38 7 0 chr5 94885036 94885853 -104744297 + L1PA6 LINE L1 5313 6135 -19 486 0 0 0 chr5 94885853 94885907 -104744243 + (TA)n Simple_repeat Simple_repeat 1 54 0 10861 200 42 32 chr5 94885907 94887180 -104742970 - L1MC3 LINE L1 -648 7137 5878 2891 98 12 9 chr5 94887180 94887600 -104742550 + L1PA12 LINE L1 5746 6166 -2 10861 200 42 32 chr5 94887600 94888860 -104741290 - L1MC3 LINE L1 -1907 5878 4547 4252 141 29 1 chr5 94888860 94889542 -104740608 + L1PA15 LINE L1 5465 6165 0 10861 200 42 32 chr5 94889542 94890152 -104739998 - L1MC3 LINE L1 -3238 4547 3944 1262 297 104 7 chr5 94890197 94890648 -104739502 - L1MCb LINE L1 -5484 561 67 1852 182 45 8 chr5 94890772 94891124 -104739026 + MLT1A1 LTR MaLR 1 365 0 233 275 0 29 chr5 94891628 94891697 -104738453 - MLT1J LTR MaLR -420 91 25 755 244 54 49 chr5 94892392 94892597 -104737553 - MER63A DNA MER1_type 0 210 5 21 57 0 0 chr5 94892851 94892886 -104737264 + AT_rich Low_complexity Low_complexity 1 35 0 1366 205 48 51 chr5 94892891 94893266 -104736884 + MLT1A2 LTR MaLR 1 374 0 283 336 10 0 chr5 94894251 94894355 -104735795 - L2 LINE L2 -234 3038 2934 1027 193 45 130 chr5 94895315 94895714 -104734436 + MLT1A1 LTR MaLR 1 365 0 22 56 0 0 chr5 94897761 94897797 -104732353 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 94898145 94898169 -104731981 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 94899052 94899081 -104731069 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 94899218 94899240 -104730910 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr5 94899379 94899400 -104730750 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 2062 96 6 13 chr5 94899969 94900282 -104729868 + L1MA1 LINE L1 5988 6298 -4 21 36 0 0 chr5 94900282 94900310 -104729840 + AT_rich Low_complexity Low_complexity 1 28 0 29 78 0 0 chr5 94902451 94902515 -104727635 + AT_rich Low_complexity Low_complexity 1 64 0 371 21 21 0 chr5 94903426 94903474 -104726676 + (CAT)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr5 94905397 94905418 -104724732 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr5 94907506 94907527 -104722623 + (CA)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr5 94907651 94907672 -104722478 + AT_rich Low_complexity Low_complexity 1 21 0 24 77 0 0 chr5 94908598 94908650 -104721500 + AT_rich Low_complexity Low_complexity 1 52 0 235 203 8 29 chr5 94908941 94909074 -104721076 + GA-rich Low_complexity Low_complexity 1 130 0 24 32 0 0 chr5 94911464 94911495 -104718655 + AT_rich Low_complexity Low_complexity 1 31 0 307 354 21 0 chr5 94911845 94911941 -104718209 + L2 LINE L2 3170 3267 -5 189 341 85 12 chr5 94912215 94912297 -104717853 + L2 LINE L2 3213 3300 -13 255 79 0 0 chr5 94913098 94913136 -104717014 + (TG)n Simple_repeat Simple_repeat 1 38 0 931 188 151 0 chr5 94913255 94913473 -104716677 + MLT1D LTR MaLR 248 498 -7 1234 157 29 29 chr5 94913481 94913723 -104716427 - MLT1D LTR MaLR -263 242 1 225 252 145 23 chr5 94914180 94914311 -104715839 + HAL1b LINE L1 1200 1346 -2 23 0 0 0 chr5 94914312 94914335 -104715815 + AT_rich Low_complexity Low_complexity 1 23 0 674 116 11 0 chr5 94914452 94914547 -104715603 - MER44D DNA MER2_type 0 705 610 275 269 0 64 chr5 94914545 94914623 -104715527 - MER7A DNA MER2_type -274 74 2 * 26 88 0 0 chr5 94914799 94914867 -104715283 + AT_rich Low_complexity Low_complexity 1 68 0 194 286 18 0 chr5 94915884 94915940 -104714210 + L2 LINE L2 3257 3313 0 364 239 68 0 chr5 94916348 94916436 -104713714 + L2 LINE L2 3199 3292 -21 2237 92 17 0 chr5 94917113 94917406 -104712744 + AluY SINE Alu 1 298 -13 4289 151 17 3 chr5 94917611 94918312 -104711838 + MER50 LTR ERV1 1 711 -23 770 322 111 16 chr5 94918315 94918740 -104711410 + LTR16C LTR ERVL 21 485 -6 33 43 0 0 chr5 94919263 94919310 -104710840 + AT_rich Low_complexity Low_complexity 1 47 0 2887 306 106 68 chr5 94919462 94921445 -104708705 + L1PB4 LINE L1 3 2137 -4725 1327 218 7 20 chr5 94921445 94921739 -104708411 + AluJo SINE Alu 1 290 -22 2887 306 106 68 chr5 94921739 94922688 -104707462 + L1PB4 LINE L1 2137 3049 -3813 7896 177 28 23 chr5 94922690 94924408 -104705742 + L1PB4 LINE L1 4245 5969 -903 1837 136 7 30 chr5 94924408 94924703 -104705447 + AluSx SINE Alu 1 288 -24 7896 177 28 23 chr5 94924703 94925547 -104704603 + L1PB4 LINE L1 5969 6808 -64 4211 59 28 41 chr5 94925548 94926161 -104703989 + MER11A LTR ERVK 1 605 -661 1431 106 18 14 chr5 94926261 94926478 -104703672 + MER11A LTR ERVK 1049 1266 0 288 79 0 0 chr5 94926526 94926564 -104703586 + L1PA16 LINE L1 6101 6138 -28 206 314 86 0 chr5 94926859 94926929 -104703221 - MER5B DNA MER1_type 0 178 103 * 265 300 50 50 chr5 94926861 94926981 -104703169 + MER5A DNA MER1_type 17 136 -53 372 173 27 27 chr5 94927121 94927231 -104702919 - L1M4 LINE L1 -3199 2947 2838 21 57 0 0 chr5 94928036 94928071 -104702079 + AT_rich Low_complexity Low_complexity 1 35 0 253 304 95 53 chr5 94928169 94928412 -104701738 + HAL1 LINE L1 2251 2503 -4 188 65 0 32 chr5 94928654 94928685 -104701465 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 1772 166 0 3 chr5 94928866 94929162 -104700988 - AluJb SINE Alu -17 295 1 314 61 20 0 chr5 94929311 94929360 -104700790 + (GA)n Simple_repeat Simple_repeat 2 51 0 239 143 0 41 chr5 94929537 94929586 -104700564 + L1MA7 LINE L1 6184 6230 -61 1022 271 134 35 chr5 94930078 94930532 -104699618 + LTR33 LTR ERVL 22 520 -1 21 0 0 0 chr5 94931494 94931515 -104698635 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr5 94932275 94932313 -104697837 + AT_rich Low_complexity Low_complexity 1 38 0 278 333 91 15 chr5 94932624 94932756 -104697394 - L2 LINE L2 -5 3267 3126 220 143 143 0 chr5 94933325 94933374 -104696776 - L2 LINE L2 0 3272 3217 334 284 71 60 chr5 94933884 94934067 -104696083 - L2 LINE L2 -460 2854 2670 1543 173 30 24 chr5 94935708 94936003 -104694147 + AluJb SINE Alu 4 300 -12 598 164 9 60 chr5 94936059 94936175 -104693975 + MLT1A2 LTR MaLR 1 110 -264 314 288 61 49 chr5 94938720 94938883 -104691267 - HAL1b LINE L1 -1032 316 152 302 277 76 17 chr5 94938958 94939077 -104691073 - L1ME1 LINE L1 -34 6132 6007 23 0 0 0 chr5 94939608 94939631 -104690519 + AT_rich Low_complexity Low_complexity 1 23 0 225 94 0 0 chr5 94939870 94939902 -104690248 + (T)n Simple_repeat Simple_repeat 1 32 0 10025 146 8 12 chr5 94939913 94941089 -104689061 - L1PA11 LINE L1 0 6174 4995 2342 84 0 13 chr5 94941089 94941400 -104688750 - AluY SINE Alu -3 308 2 10025 146 8 12 chr5 94941400 94942774 -104687376 - L1PA11 LINE L1 -1179 4995 3640 1759 181 9 9 chr5 94942875 94943218 -104686932 - L1PA11 LINE L1 -2477 3669 3327 545 106 39 34 chr5 94944687 94944866 -104685284 + (TA)n Simple_repeat Simple_repeat 1 180 0 1922 117 46 0 chr5 94946013 94946338 -104683812 + L1MA2 LINE L1 5965 6304 0 642 234 60 0 chr5 94946615 94946782 -104683368 - MER45A DNA AcHobo -1 177 1 197 274 0 0 chr5 94947854 94947905 -104682245 - MIR SINE MIR -76 132 82 181 308 128 26 chr5 94948816 94948933 -104681217 - L2 LINE L2 -5 3308 3180 216 345 62 18 chr5 94950365 94950478 -104679672 - L2 LINE L2 -1 3312 3195 1220 201 229 101 chr5 94951194 94951741 -104678409 + MLT1E1 LTR MaLR 1 617 -7 887 225 42 135 chr5 94953173 94953238 -104676912 - MLT1A1 LTR MaLR -2 363 294 1658 103 8 0 chr5 94953238 94953480 -104676670 - L1PB1 LINE L1 -2 6149 5906 887 225 42 135 chr5 94953480 94953814 -104676336 - MLT1A1 LTR MaLR -71 294 1 1878 137 153 24 chr5 94954808 94955187 -104674963 - MSTA LTR MaLR 0 428 1 8338 151 43 36 chr5 94955187 94956747 -104673403 - MSTA-int LTR MaLR -8 1572 3 1768 143 178 22 chr5 94956749 94957119 -104673031 - MSTA LTR MaLR 0 428 1 2482 124 6 0 chr5 94957273 94957635 -104672515 + THE1B LTR MaLR 1 364 0 22 35 0 0 chr5 94957685 94957714 -104672436 + AT_rich Low_complexity Low_complexity 1 29 0 523 314 89 48 chr5 94957740 94958154 -104671996 + L3 LINE CR1 564 994 -583 23 0 0 0 chr5 94958299 94958322 -104671828 + AT_rich Low_complexity Low_complexity 1 23 0 513 32 0 0 chr5 94958478 94958541 -104671609 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 1980 144 105 13 chr5 94958541 94958930 -104671220 - MSTA LTR MaLR -3 425 1 234 205 36 36 chr5 94959194 94959277 -104670873 + (TATAA)n Simple_repeat Simple_repeat 5 87 0 205 255 88 49 chr5 94959611 94959713 -104670437 + L3 LINE CR1 1278 1383 -194 3608 225 15 1 chr5 94959774 94960663 -104669487 - L1PB1 LINE L1 -966 5180 4280 5702 113 12 1 chr5 94960670 94961623 -104668527 + L1PB1 LINE L1 5187 6149 -2 25 0 0 0 chr5 94961623 94961648 -104668502 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr5 94962609 94962641 -104667509 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr5 94962788 94962813 -104667337 + AT_rich Low_complexity Low_complexity 1 25 0 1850 132 76 20 chr5 94963783 94964125 -104666025 - THE1B LTR MaLR -1 363 3 11029 98 15 9 chr5 94964127 94965698 -104664452 - THE1B-int LTR MaLR 0 1580 1 2088 133 51 20 chr5 94965698 94966051 -104664099 - THE1B LTR MaLR 0 364 1 23 54 0 0 chr5 94966618 94966655 -104663495 + AT_rich Low_complexity Low_complexity 1 37 0 741 129 27 7 chr5 94966939 94967086 -104663064 + CT-rich Low_complexity Low_complexity 1 150 0 1954 148 37 28 chr5 94967274 94967626 -104662524 - THE1B LTR MaLR -1 363 9 480 343 76 25 chr5 94968504 94968768 -104661382 - L2 LINE L2 -217 3055 2783 1132 164 5 0 chr5 94968857 94969046 -104661104 - AluSg/x SINE Alu -41 271 82 303 361 68 41 chr5 94969046 94969384 -104660766 - L2 LINE L2 -667 2647 2301 234 128 0 0 chr5 94970208 94970247 -104659903 + (TATG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr5 94970336 94970364 -104659786 + AT_rich Low_complexity Low_complexity 1 28 0 256 361 150 18 chr5 94970887 94971114 -104659036 - L2 LINE L2 -543 2771 2515 413 338 59 23 chr5 94971161 94971465 -104658685 + L1MDb LINE L1 1138 1458 -4938 439 266 71 46 chr5 94971481 94971586 -104658564 + L1MDb LINE L1 1552 1653 -4772 1415 176 53 14 chr5 94971586 94971870 -104658280 - AluJo SINE Alu -17 295 1 439 266 71 46 chr5 94971870 94972046 -104658104 + L1MDb LINE L1 1653 1859 -4566 1160 242 70 42 chr5 94972124 94972477 -104657673 - Charlie6 DNA MER1_type -39 3461 3090 1453 211 94 3 chr5 94972477 94972808 -104657342 + MLT1A1 LTR MaLR 1 361 -4 1160 242 70 42 chr5 94972808 94972925 -104657225 - Charlie6 DNA MER1_type -410 3090 2978 30 27 0 0 chr5 94972928 94972965 -104657185 + AT_rich Low_complexity Low_complexity 1 37 0 200 281 11 22 chr5 94972973 94973062 -104657088 + (CATATA)n Simple_repeat Simple_repeat 5 92 0 1436 225 129 52 chr5 94973070 94973333 -104656817 - L1M4c LINE L1 -4469 2488 2247 2166 120 0 3 chr5 94973333 94973632 -104656518 - AluSx SINE Alu -14 298 1 1436 225 129 52 chr5 94973632 94974025 -104656125 - L1M4c LINE L1 -4710 2247 1745 1764 234 47 28 chr5 94974053 94974522 -104655628 - L1M4c LINE L1 -5446 1413 936 1967 262 42 39 chr5 94974594 94975318 -104654832 - L1M4c LINE L1 -6051 808 3 2135 251 38 74 chr5 94975329 94976502 -104653648 - L1MEc LINE L1 -4049 2347 1218 572 304 34 15 chr5 94976498 94976702 -104653448 - L1MEc LINE L1 -6147 249 42 * 2080 165 64 7 chr5 94977929 94978334 -104651816 - MSTA LTR MaLR 0 428 1 189 74 0 0 chr5 94978538 94978565 -104651585 + (CA)n Simple_repeat Simple_repeat 2 28 0 206 250 132 13 chr5 94978603 94978679 -104651471 + L2 LINE L2 3188 3272 0 6072 191 11 5 chr5 94979007 94980261 -104649889 - L1 LINE L1 -1101 5045 3784 1983 117 31 0 chr5 94980286 94980616 -104649534 - AluY SINE Alu 0 311 1 5950 101 23 2 chr5 94980630 94981687 -104648463 + L1PB1 LINE L1 5068 6151 0 240 303 80 34 chr5 94981723 94982038 -104648112 + L1ME3 LINE L1 3587 3922 -2224 21 36 0 0 chr5 94982039 94982067 -104648083 + AT_rich Low_complexity Low_complexity 1 28 0 512 114 0 11 chr5 94982076 94982164 -104647986 - L1PB4 LINE L1 -2 6154 6068 246 317 48 0 chr5 94982258 94982362 -104647788 + L1ME3 LINE L1 4055 4163 -1983 543 286 102 46 chr5 94983455 94983780 -104646370 + HAL1 LINE L1 168 510 -1997 2188 269 81 6 chr5 94983961 94984693 -104645457 + L1ME3 LINE L1 5359 6145 -17 326 344 16 0 chr5 94984772 94984894 -104645256 + MLT1I LTR MaLR 17 140 -269 905 261 37 25 chr5 94984995 94985317 -104644833 + HAL1 LINE L1 1394 1719 -788 273 328 73 30 chr5 94985396 94985748 -104644402 + MLT1J LTR MaLR 97 505 -6 641 271 8 69 chr5 94985855 94986117 -104644033 + HAL1 LINE L1 2241 2486 -21 932 302 63 46 chr5 94987920 94988053 -104642097 + MLT1J LTR MaLR 1 130 -381 2389 144 18 0 chr5 94988053 94988434 -104641716 + MLT1B LTR MaLR 3 390 0 932 302 63 46 chr5 94988434 94988760 -104641390 + MLT1J LTR MaLR 130 468 -43 289 288 42 68 chr5 94990904 94990947 -104639203 - L2 LINE L2 0 3313 3270 1937 202 71 61 chr5 94990947 94991456 -104638694 + MER67D LTR ERV1 1 514 0 289 288 42 68 chr5 94991456 94991530 -104638620 - L2 LINE L2 -43 3270 3199 1977 128 131 0 chr5 94991603 94991946 -104638204 - MSTA LTR MaLR 0 428 41 564 344 36 50 chr5 94992767 94993130 -104637020 + L2 LINE L2 2930 3287 -26 23 78 0 0 chr5 94994161 94994212 -104635938 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr5 94994433 94994454 -104635696 + AT_rich Low_complexity Low_complexity 1 21 0 1708 186 52 3 chr5 94995095 94995423 -104634727 + MLT1A1 LTR MaLR 21 364 -1 752 314 48 16 chr5 94995704 94995956 -104634194 + MIR SINE MIR 3 262 0 237 305 41 24 chr5 94996014 94996154 -104633996 - MIR3 SINE MIR -64 144 8 2164 113 3 31 chr5 94996297 94996615 -104633535 - AluSx SINE Alu -3 309 1 527 174 0 0 chr5 94996617 94996703 -104633447 - MIR SINE MIR -111 151 66 2352 90 3 3 chr5 94997531 94997843 -104632307 - AluSp SINE Alu 0 313 2 195 42 0 0 chr5 94998183 94998207 -104631943 + (TA)n Simple_repeat Simple_repeat 1 24 0 330 296 37 52 chr5 94998414 94998549 -104631601 + MLT1K LTR MaLR 102 234 -354 787 228 83 19 chr5 94998811 94999162 -104630988 - LTR25 LTR ERV1 -41 753 417 394 140 18 114 chr5 94999338 94999452 -104630698 - MER61E LTR ERV1 -466 103 1 21 36 0 0 chr5 94999849 94999877 -104630273 + AT_rich Low_complexity Low_complexity 1 28 0 2266 91 10 0 chr5 95001106 95001414 -104628736 + AluY SINE Alu 1 311 0 241 155 35 0 chr5 95002578 95002636 -104627514 + (TA)n Simple_repeat Simple_repeat 2 61 0 229 68 45 0 chr5 95002648 95002692 -104627458 + (TG)n Simple_repeat Simple_repeat 1 46 0 270 238 143 38 chr5 95003395 95003500 -104626650 - L2 LINE L2 -25 3288 3173 243 301 108 0 chr5 95003572 95003665 -104626485 - MIR SINE MIR -94 168 66 502 298 54 50 chr5 95003757 95004015 -104626135 + MIR SINE MIR 3 261 -1 2326 57 40 3 chr5 95007548 95007846 -104622304 + AluY SINE Alu 1 309 -2 256 191 0 0 chr5 95007884 95007931 -104622219 - MLT1K LTR MaLR -168 420 374 3293 71 2 11 chr5 95008014 95008466 -104621684 + LTR7 LTR ERV1 1 448 -2 1526 165 75 19 chr5 95008726 95009047 -104621103 + MER44D DNA MER2_type 1 609 0 2545 193 45 12 chr5 95009247 95009807 -104620343 - L1MD3 LINE L1 -14 7981 7404 392 278 78 0 chr5 95009808 95009923 -104620227 - MLT1F1 LTR MaLR -443 124 1 597 229 11 50 chr5 95009924 95010103 -104620047 - L1MD3 LINE L1 -718 7277 7106 210 91 0 0 chr5 95010117 95010150 -104620000 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 25586 119 11 12 chr5 95010159 95015171 -104614979 - L1P3 LINE L1 -1425 5036 8 968 283 43 5 chr5 95015249 95015620 -104614530 + L1MD2 LINE L1 4709 5093 -1053 6905 132 9 11 chr5 95015638 95016992 -104613158 - L1MA1 LINE L1 0 6302 4953 2508 253 47 32 chr5 95016991 95018032 -104612118 + L1MD2 LINE L1 5078 6132 -227 * 24 53 0 0 chr5 95018052 95018090 -104612060 + AT_rich Low_complexity Low_complexity 1 38 0 510 174 104 0 chr5 95018090 95018205 -104611945 - L1MD3 LINE L1 -959 7036 6910 22 0 0 0 chr5 95018310 95018332 -104611818 + AT_rich Low_complexity Low_complexity 1 22 0 201 39 0 0 chr5 95019057 95019083 -104611067 + (TG)n Simple_repeat Simple_repeat 2 27 0 288 347 76 7 chr5 95020486 95020630 -104609520 - MIR SINE MIR -56 206 53 2141 130 0 0 chr5 95020788 95021095 -104609055 + AluSx SINE Alu 3 309 -3 225 0 0 0 chr5 95021204 95021229 -104608921 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 8703 187 50 36 chr5 95021682 95022707 -104607443 - L1MB1 LINE L1 0 6168 5158 741 69 0 0 chr5 95022707 95022809 -104607341 - L1PA13 LINE L1 -2 6161 6060 8703 187 50 36 chr5 95022809 95024944 -104605206 - L1MB1 LINE L1 -1010 5158 2971 301 348 27 51 chr5 95025390 95025646 -104604504 - L1MEc LINE L1 -2157 4058 3809 29060 37 13 1 chr5 95025762 95031790 -104598360 + L1PA3 LINE L1 1 6150 -5 409 229 12 0 chr5 95031937 95032020 -104598130 + L1 LINE L1 4843 4926 -1220 30 27 0 0 chr5 95032221 95032258 -104597892 + AT_rich Low_complexity Low_complexity 1 37 0 373 391 73 19 chr5 95032287 95032734 -104597416 + L1ME LINE L1 5256 5730 -391 823 261 51 83 chr5 95033493 95033888 -104596262 + LTR16A1 LTR ERVL 15 396 -61 300 250 80 0 chr5 95036337 95036437 -104593713 - L1ME LINE L1 -362 5800 5693 1930 159 3 7 chr5 95036462 95036758 -104593392 - AluJb SINE Alu -17 295 1 450 293 3 37 chr5 95037161 95037458 -104592692 - L1MEc LINE L1 -2816 3399 3113 587 284 44 20 chr5 95037534 95037830 -104592320 - L1MEc LINE L1 -3654 2561 2259 239 240 48 64 chr5 95038015 95038140 -104592010 - L1MEc LINE L1 -4655 1741 1619 2443 57 0 0 chr5 95038204 95038501 -104591649 - AluY SINE Alu -14 297 1 188 360 52 37 chr5 95039287 95039423 -104590727 + L2 LINE L2 3160 3297 -16 21 0 0 0 chr5 95043226 95043247 -104586903 + AT_rich Low_complexity Low_complexity 1 21 0 314 322 0 0 chr5 95043374 95043464 -104586686 + MER82 DNA MER2_type 7 96 -557 222 310 42 63 chr5 95043501 95043643 -104586507 - MIR SINE MIR -57 205 67 401 205 12 0 chr5 95043643 95043726 -104586424 + MER82 DNA MER2_type 570 653 0 332 315 27 0 chr5 95043860 95044006 -104586144 - L1ME LINE L1 -908 5238 5089 276 295 108 30 chr5 95044056 95044440 -104585710 - L1ME LINE L1 -1141 5005 4568 1406 270 29 82 chr5 95044440 95045066 -104585084 - MLT1E LTR MaLR 0 593 1 276 295 108 30 chr5 95045066 95045181 -104584969 - L1ME LINE L1 -1578 4568 4463 331 345 35 31 chr5 95045281 95045507 -104584643 - L1ME LINE L1 -1900 4246 4020 2483 216 23 3 chr5 95095578 95096144 -104534006 - L1 LINE L1 -826 5320 4744 1025 172 35 4 chr5 95096148 95096375 -104533775 + L1 LINE L1 4242 4475 -1671 291 283 0 20 chr5 95097693 95097792 -104532358 + (CAGAGA)n Simple_repeat Simple_repeat 3 99 0 236 319 0 0 chr5 95098350 95098419 -104531731 + GA-rich Low_complexity Low_complexity 1 69 0 22 0 0 0 chr5 95098426 95098448 -104531702 + GC_rich Low_complexity Low_complexity 1 22 0 291 54 0 0 chr5 95100213 95100250 -104529900 + (T)n Simple_repeat Simple_repeat 1 37 0 206 121 30 0 chr5 95100257 95100290 -104529860 + GA-rich Low_complexity Low_complexity 2 35 0 1526 185 0 0 chr5 95100555 95100825 -104529325 - AluJb SINE Alu -21 291 22 255 310 142 0 chr5 95101383 95101496 -104528654 + L1ME3A LINE L1 5533 5661 -460 251 236 57 38 chr5 95104360 95104466 -104525684 + L1ME2 LINE L1 6047 6154 -10 1982 219 35 22 chr5 95104518 95105007 -104525143 - MLT1D LTR MaLR -8 497 3 212 178 0 22 chr5 95107685 95107730 -104522420 + GA-rich Low_complexity Low_complexity 3 46 0 3874 86 29 6 chr5 95109718 95110480 -104519670 - L1P3 LINE L1 -593 5579 4805 222 212 0 45 chr5 95114951 95115017 -104515133 + (TATATG)n Simple_repeat Simple_repeat 6 68 0 2246 79 3 3 chr5 95116127 95116431 -104513719 - AluY SINE Alu -7 304 1 518 211 145 20 chr5 95116787 95116939 -104513211 + L1ME3A LINE L1 5706 5876 -294 698 208 127 34 chr5 95117222 95117609 -104512541 + MER31B LTR ERV1 1 543 0 186 66 49 49 chr5 95118913 95118974 -104511176 + GA-rich Low_complexity Low_complexity 2 62 0 218 309 107 0 chr5 95119453 95119537 -104510613 + MIR SINE MIR 40 132 -130 230 189 0 0 chr5 95120050 95120087 -104510063 + L1P LINE L1 4885 4921 -1225 181 343 27 27 chr5 95120348 95120421 -104509729 + MIR3 SINE MIR 109 181 -27 203 302 47 0 chr5 95120767 95120873 -104509277 + (CATA)n Simple_repeat Simple_repeat 4 114 0 360 296 96 7 chr5 95120904 95121039 -104509111 - MIR SINE MIR -51 211 65 290 179 21 21 chr5 95122181 95122276 -104507874 + A-rich Low_complexity Low_complexity 4 98 0 22 0 0 0 chr5 95122629 95122651 -104507499 + AT_rich Low_complexity Low_complexity 1 22 0 1019 196 44 5 chr5 95124663 95124867 -104505283 + MLT1A1 LTR MaLR 154 365 0 518 269 26 6 chr5 95124875 95125031 -104505119 + LTR16A1 LTR ERVL 298 456 -1 837 340 42 11 chr5 95125032 95125479 -104504671 + HERV16 LTR ERVL 1 461 -4535 548 328 53 39 chr5 95125672 95126084 -104504066 + ERVL LTR ERVL 4057 4474 -1290 313 252 122 42 chr5 95126505 95126767 -104503383 + L1ME4a LINE L1 5597 5879 -242 1003 82 7 0 chr5 95127153 95127288 -104502862 + AluSq/x SINE Alu 2 137 -175 1833 131 21 0 chr5 95127288 95127578 -104502572 + AluJb SINE Alu 1 296 -16 23 0 0 0 chr5 95130106 95130129 -104500021 + AT_rich Low_complexity Low_complexity 1 23 0 594 177 9 18 chr5 95133005 95133118 -104497032 + AluJb SINE Alu 201 312 0 1904 169 28 68 chr5 95133150 95133575 -104496575 + MLT2D LTR ERVL 3 410 -4 196 344 197 0 chr5 95133577 95133795 -104496355 - L2 LINE L2 -823 2491 2231 194 352 136 0 chr5 95134636 95134761 -104495389 + MER5A DNA MER1_type 7 148 -41 21 0 0 0 chr5 95134898 95134919 -104495231 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 95135739 95135770 -104494380 + AT_rich Low_complexity Low_complexity 1 31 0 781 104 0 2 chr5 95136645 95136767 -104493383 - LTR12 LTR ERV1 -133 581 49 282 236 0 0 chr5 95136767 95136839 -104493311 - LTR30 LTR ERV1 -98 624 553 1338 133 153 4 chr5 95136840 95137088 -104493062 - LTR12 LTR ERV1 -429 285 1 265 88 0 0 chr5 95137256 95137290 -104492860 + U2 snRNA snRNA 1 34 -154 407 270 0 16 chr5 95137904 95138030 -104492120 + MLT1H LTR MaLR 111 234 -315 2239 92 0 0 chr5 95138718 95139011 -104491139 + AluSg1 SINE Alu 1 293 -16 24 0 0 0 chr5 95139372 95139396 -104490754 + AT_rich Low_complexity Low_complexity 1 24 0 1433 228 19 27 chr5 95139874 95140242 -104489908 + MLT1A1 LTR MaLR 1 365 0 282 29 0 0 chr5 95142377 95142412 -104487738 + (TG)n Simple_repeat Simple_repeat 1 35 0 304 95 0 0 chr5 95145391 95145433 -104484717 - 5S rRNA rRNA -79 42 1 323 333 134 10 chr5 95145437 95145638 -104484512 - MIR SINE MIR -7 255 30 25 31 0 0 chr5 95147437 95147469 -104482681 + AT_rich Low_complexity Low_complexity 1 32 0 269 307 98 31 chr5 95147550 95147713 -104482437 + MLT1L LTR MaLR 48 221 -394 407 328 56 10 chr5 95147724 95147919 -104482231 + MLT1L LTR MaLR 412 615 0 1618 214 14 22 chr5 95148414 95148773 -104481377 + MLT1A1 LTR MaLR 6 361 -4 360 0 0 0 chr5 95149262 95149302 -104480848 + (TG)n Simple_repeat Simple_repeat 2 41 0 209 283 98 22 chr5 95149870 95149962 -104480188 + MIR SINE MIR 77 175 -87 2346 101 0 0 chr5 95150060 95150368 -104479782 + AluSc SINE Alu 1 308 -1 943 193 35 0 chr5 95151663 95151860 -104478290 - L1ME LINE L1 -445 5719 5516 291 325 61 16 chr5 95151896 95152142 -104478008 - L1MDa LINE L1 -981 1920 1571 434 320 82 48 chr5 95152401 95152901 -104477249 - L1MDa LINE L1 -5281 1249 733 22 35 0 0 chr5 95153662 95153691 -104476459 + AT_rich Low_complexity Low_complexity 1 29 0 1508 196 21 10 chr5 95154079 95154370 -104475780 - AluJb SINE Alu -18 294 1 2091 135 21 47 chr5 95154970 95155355 -104474795 + THE1C LTR MaLR 1 375 0 358 209 45 64 chr5 95155493 95155603 -104474547 - MIR SINE MIR -51 211 104 638 110 28 0 chr5 95155703 95155812 -104474338 - L1P LINE L1 -1444 4702 4591 584 135 0 10 chr5 95155799 95155895 -104474255 + L1P LINE L1 4473 4567 -1579 * 24 67 0 0 chr5 95156778 95156823 -104473327 + AT_rich Low_complexity Low_complexity 1 45 0 209 241 17 0 chr5 95161820 95161878 -104468272 + (TA)n Simple_repeat Simple_repeat 2 60 0 229 217 96 24 chr5 95162060 95162143 -104468007 - MER103 DNA DNA -52 114 26 468 299 82 41 chr5 95162584 95162828 -104467322 - MLT1L LTR MaLR 0 615 362 221 325 49 32 chr5 95164095 95164218 -104465932 + MIR SINE MIR 1 125 -137 583 279 45 18 chr5 95165714 95165936 -104464214 - LTR16B LTR ERVL -1 463 236 2004 54 0 8 chr5 95166425 95166684 -104463466 - L1PA8 LINE L1 -7 6165 5909 299 319 43 11 chr5 95166737 95166831 -104463319 + MIR SINE MIR 36 132 -130 723 187 8 8 chr5 95166983 95167117 -104463033 - MLT1D LTR MaLR -352 153 20 396 192 0 0 chr5 95167113 95167186 -104462964 + MLT1D LTR MaLR 284 356 -149 * 2440 164 57 24 chr5 95167859 95168406 -104461744 - L1MA8 LINE L1 -6 6285 5721 1913 140 0 4 chr5 95168811 95169083 -104461067 - AluSx SINE Alu -13 299 29 216 311 14 27 chr5 95170414 95170488 -104459662 + L2 LINE L2 3191 3263 -9 318 26 0 0 chr5 95171394 95171433 -104458717 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr5 95172859 95172880 -104457270 + AT_rich Low_complexity Low_complexity 1 21 0 357 320 17 69 chr5 95174484 95174659 -104455491 - MER5B DNA MER1_type 0 178 13 652 169 0 44 chr5 95174678 95174814 -104455336 - MER5A DNA MER1_type -28 161 32 381 277 244 38 chr5 95175075 95175288 -104454862 - MIR SINE MIR -4 258 2 254 222 0 0 chr5 95175392 95175446 -104454704 - MIR SINE MIR -3 259 206 186 293 114 89 chr5 95175738 95175861 -104454289 - MIR3 SINE MIR -75 133 8 199 160 0 100 chr5 95176105 95176155 -104453995 + MIR SINE MIR 218 262 0 996 121 0 73 chr5 95177779 95177807 -104452343 - AluSq SINE Alu -160 153 125 1942 121 21 7 chr5 95177807 95178096 -104452054 - AluSx SINE Alu -19 293 1 996 121 0 73 chr5 95178096 95178232 -104451918 - AluSq SINE Alu -188 125 1 2206 104 3 0 chr5 95178363 95178660 -104451490 + AluSx SINE Alu 1 298 -14 453 19 0 0 chr5 95178661 95178715 -104451435 + (CA)n Simple_repeat Simple_repeat 2 55 0 2049 123 0 10 chr5 95178937 95179230 -104450920 - AluSx SINE Alu -22 290 1 276 300 173 25 chr5 95179303 95179580 -104450570 - L1ME LINE L1 -342 5779 5462 213 39 0 0 chr5 95180204 95180230 -104449920 + (T)n Simple_repeat Simple_repeat 1 26 0 26 30 0 0 chr5 95180287 95180320 -104449830 + AT_rich Low_complexity Low_complexity 1 33 0 420 355 42 0 chr5 95180454 95180643 -104449507 + MIR SINE MIR 47 243 -19 458 251 227 45 chr5 95182136 95182515 -104447635 - MLT1J2 LTR MaLR 0 450 3 353 342 89 6 chr5 95183615 95183773 -104446377 + MIR SINE MIR 58 228 -34 1935 151 50 0 chr5 95184123 95184442 -104445708 - MER44D DNA MER2_type -4 605 1 285 333 14 22 chr5 95184926 95185064 -104445086 + MIR SINE MIR 76 212 -50 25 31 0 0 chr5 95185180 95185212 -104444938 + AT_rich Low_complexity Low_complexity 1 32 0 33 0 0 0 chr5 95186801 95186834 -104443316 + AT_rich Low_complexity Low_complexity 1 33 0 253 88 66 22 chr5 95186837 95186928 -104443222 + (TA)n Simple_repeat Simple_repeat 2 96 0 193 231 0 0 chr5 95188435 95188474 -104441676 + L2 LINE L2 3275 3313 0 42 86 0 0 chr5 95189607 95189712 -104440438 + AT_rich Low_complexity Low_complexity 1 105 0 456 320 79 42 chr5 95189761 95190142 -104440008 + MLT1I LTR MaLR 1 395 -14 504 307 55 51 chr5 95190357 95190650 -104439500 + LTR16A1 LTR ERVL 163 456 -1 1355 162 50 56 chr5 95191771 95192148 -104438002 - THE1C LTR MaLR 0 375 1 384 288 90 50 chr5 95192221 95192544 -104437606 + L1MC4a LINE L1 5598 5933 -1875 428 298 122 5 chr5 95193198 95193386 -104436764 + MIR SINE MIR 49 258 -4 1669 43 24 0 chr5 95193933 95194141 -104436009 - L1PA8 LINE L1 -233 5939 5727 1685 83 0 12 chr5 95194141 95194377 -104435773 + L1PA8 LINE L1 5932 6168 -4 623 294 126 39 chr5 95194652 95194942 -104435208 + MLT1L LTR MaLR 142 480 -135 2150 98 0 0 chr5 95194942 95195216 -104434934 - AluSg SINE Alu -13 297 24 623 294 126 39 chr5 95195216 95195337 -104434813 + MLT1L LTR MaLR 480 589 -26 2086 109 20 7 chr5 95195347 95195641 -104434509 - AluSx SINE Alu -14 298 1 1216 276 40 33 chr5 95196121 95196545 -104433605 - L2 LINE L2 -871 2443 2017 1804 181 0 0 chr5 95196578 95196871 -104433279 + AluJb SINE Alu 1 293 -19 222 284 47 79 chr5 95196907 95197034 -104433116 + L2 LINE L2 1460 1582 -1732 243 0 0 0 chr5 95197745 95197772 -104432378 + (TG)n Simple_repeat Simple_repeat 1 27 0 775 230 24 16 chr5 95199237 95199485 -104430665 + L1MC5 LINE L1 7665 7914 -47 23 33 0 0 chr5 95200149 95200179 -104429971 + AT_rich Low_complexity Low_complexity 1 30 0 272 356 61 11 chr5 95200402 95200582 -104429568 + L2 LINE L2 2726 2914 -400 195 283 67 17 chr5 95200682 95200742 -104429408 - L2 LINE L2 -19 3253 3191 28 71 0 0 chr5 95200784 95200840 -104429310 + AT_rich Low_complexity Low_complexity 1 56 0 290 268 0 0 chr5 95204866 95204937 -104425213 - MIR SINE MIR -3 259 189 200 357 0 30 chr5 95205497 95205665 -104424485 + A-rich Low_complexity Low_complexity 3 165 0 228 67 0 0 chr5 95206329 95206359 -104423791 + (TG)n Simple_repeat Simple_repeat 2 31 0 383 59 0 0 chr5 95208117 95208168 -104421982 - MADE1 DNA Mariner -27 53 3 417 289 26 7 chr5 95208479 95208631 -104421519 - MER103 DNA DNA -9 157 3 446 314 67 21 chr5 95208749 95208943 -104421207 - MIR SINE MIR -40 222 20 2132 77 24 0 chr5 95209115 95209287 -104420863 - AluY SINE Alu -7 304 121 183 42 0 0 chr5 95209287 95209311 -104420839 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2132 77 24 0 chr5 95209311 95209435 -104420715 - AluY SINE Alu -190 121 1 465 260 192 50 chr5 95209605 95209897 -104420253 + L2 LINE L2 993 1357 -1957 1950 138 0 3 chr5 95209897 95210186 -104419964 - AluSx SINE Alu -24 288 1 465 260 192 50 chr5 95210186 95210289 -104419861 + L2 LINE L2 1357 1444 -1870 1165 306 141 31 chr5 95210289 95210440 -104419710 + L2 LINE L2 1654 1787 -1527 4242 98 4 52 chr5 95210440 95210671 -104419479 - L1MA3 LINE L1 -13 6292 6052 688 197 162 0 chr5 95210671 95210813 -104419337 - FRAM SINE Alu -1 165 1 4242 98 4 52 chr5 95210813 95211278 -104418872 - L1MA3 LINE L1 -253 6052 5629 1165 306 141 31 chr5 95211278 95211826 -104418324 + L2 LINE L2 1787 2430 -884 835 332 79 41 chr5 95212097 95213045 -104417105 - ERVL LTR ERVL -1312 4452 3414 26 30 0 0 chr5 95215054 95215087 -104415063 + AT_rich Low_complexity Low_complexity 1 33 0 259 250 122 26 chr5 95215091 95215247 -104414903 + L1ME1 LINE L1 5698 5868 -253 4660 143 17 28 chr5 95217158 95218122 -104412028 + L1MA2 LINE L1 5376 6304 0 355 289 84 16 chr5 95220190 95220329 -104409821 - MIR SINE MIR -58 150 1 421 279 88 39 chr5 95220448 95220652 -104409498 + MIR SINE MIR 40 253 -9 1105 223 35 0 chr5 95220971 95221200 -104408950 - MER8 DNA MER2_type 0 239 3 378 0 0 0 chr5 95221200 95221242 -104408908 + (TA)n Simple_repeat Simple_repeat 1 42 0 2191 183 41 7 chr5 95221262 95221704 -104408446 + MSTB2 LTR MaLR 1 457 0 226 368 26 8 chr5 95222149 95222266 -104407884 - L2 LINE L2 -504 2810 2692 1978 136 10 3 chr5 95222890 95223184 -104406966 - AluJb SINE Alu -16 296 1 180 0 0 0 chr5 95223307 95223327 -104406823 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 240 98 122 0 chr5 95224210 95224251 -104405899 + AluSc SINE Alu 1 46 -253 4563 122 30 28 chr5 95224251 95225623 -104404527 + pTR5 LTR ERV1 750 2438 0 1816 98 11 11 chr5 95225626 95225892 -104404258 + AluSc SINE Alu 31 296 -13 463 241 9 0 chr5 95225978 95226094 -104404056 + L1ME1 LINE L1 6049 6165 -1 598 254 7 0 chr5 95226104 95226242 -104403908 - L1M4 LINE L1 -6389 153 15 280 205 57 57 chr5 95226236 95226341 -104403809 - L1ME3A LINE L1 -242 5928 5840 * 1361 195 37 14 chr5 95226380 95226677 -104403473 - MER1B DNA MER1_type -8 331 28 1470 264 131 21 chr5 95226778 95227673 -104402477 - L1M4 LINE L1 -2190 3956 2964 380 238 100 12 chr5 95227697 95227857 -104402293 - L1M4 LINE L1 -3603 2543 2370 330 207 129 0 chr5 95227879 95227995 -104402155 + L1M4 LINE L1 5218 5348 -798 711 152 80 0 chr5 95228005 95228156 -104401994 - L1MB4 LINE L1 -1 6179 6017 565 262 24 12 chr5 95228624 95228788 -104401362 - MER5B DNA MER1_type 0 178 13 452 292 41 29 chr5 95229167 95229338 -104400812 + MER5B DNA MER1_type 6 178 0 23 0 0 0 chr5 95229524 95229547 -104400603 + AT_rich Low_complexity Low_complexity 1 23 0 324 0 0 0 chr5 95229878 95229914 -104400236 + (CA)n Simple_repeat Simple_repeat 2 37 0 236 188 72 43 chr5 95230130 95230199 -104399951 - L2 LINE L2 -1 3312 3242 4109 146 15 10 chr5 95230305 95231156 -104398994 + L1MA8 LINE L1 5123 5977 -314 2515 106 13 19 chr5 95232149 95232526 -104397624 - THE1C LTR MaLR 0 375 1 9731 128 17 39 chr5 95232526 95233655 -104396495 - THE1C-int LTR MaLR 0 1580 495 2276 104 3 0 chr5 95233655 95233954 -104396196 - AluY SINE Alu -11 300 1 9731 128 17 39 chr5 95233954 95234439 -104395711 - THE1C-int LTR MaLR -1085 495 1 2214 129 44 22 chr5 95234441 95234806 -104395344 - THE1C LTR MaLR -2 373 1 670 211 111 67 chr5 95234930 95235138 -104395012 + MER20 DNA MER1_type 2 218 -1 3911 196 68 52 chr5 95235330 95236268 -104393882 + LTR28 LTR ERV1 1 953 -67 313 222 74 89 chr5 95236299 95236434 -104393716 + LTR27 LTR ERV1 502 634 -2 22 35 0 0 chr5 95236461 95236490 -104393660 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 95236737 95236760 -104393390 + AT_rich Low_complexity Low_complexity 1 23 0 1286 270 54 16 chr5 95237166 95237595 -104392555 + L1M4 LINE L1 25 469 -5954 1644 250 16 56 chr5 95237747 95238318 -104391832 + L1M4 LINE L1 862 1409 -5014 233 355 45 41 chr5 95238318 95238538 -104391612 - MIR SINE MIR -14 248 28 2569 46 3 0 chr5 95239162 95239468 -104390682 + AluY SINE Alu 1 307 -4 1562 169 69 34 chr5 95239552 95239750 -104390400 - MER46B DNA MER2_type -2495 236 144 1552 153 22 22 chr5 95239750 95240018 -104390132 - AluJo SINE Alu 0 312 45 1562 169 69 34 chr5 95240018 95240168 -104389982 - MER46B DNA MER2_type -2587 144 1 200 122 24 0 chr5 95240456 95240497 -104389653 + (TTTAA)n Simple_repeat Simple_repeat 1 42 0 836 204 32 107 chr5 95240688 95240860 -104389290 + MER33 DNA MER1_type 7 143 -2442 1369 211 14 7 chr5 95240860 95241140 -104389010 - AluJo SINE Alu -30 282 1 836 204 32 107 chr5 95241140 95241305 -104388845 + MER33 DNA MER1_type 143 319 -5 1788 238 71 39 chr5 95241361 95242075 -104388075 + L1M4 LINE L1 2429 3165 -3957 263 250 0 29 chr5 95242072 95242140 -104388010 + L1M4 LINE L1 6448 6513 -456 * 268 186 0 17 chr5 95242195 95242254 -104387896 + L1MCc LINE L1 4693 4750 -2191 2022 123 0 7 chr5 95242263 95242547 -104387603 + AluSx SINE Alu 1 282 -30 252 0 0 0 chr5 95242548 95242576 -104387574 + (TTA)n Simple_repeat Simple_repeat 3 30 0 7578 23 0 0 chr5 95242576 95243986 -104386164 - L1PA3 LINE L1 -18 6137 4728 336 144 2 12 chr5 95243986 95244035 -104386115 + Alu SINE Alu 252 296 -6 3548 236 81 37 chr5 95244039 95244724 -104385426 + L1MCc LINE L1 4759 5412 -1840 282 29 0 0 chr5 95244724 95244759 -104385391 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 3548 236 81 37 chr5 95244759 95245363 -104384787 + L1MCc LINE L1 5412 6136 -1116 5343 135 19 12 chr5 95245363 95246499 -104383651 + L1PA16 LINE L1 5017 6157 -9 3548 236 81 37 chr5 95246499 95246891 -104383259 + L1MCc LINE L1 6136 6509 -743 563 345 59 17 chr5 95246969 95247326 -104382824 + L1MEc LINE L1 41 412 -5984 1737 236 63 32 chr5 95247633 95248204 -104381946 + L1ME LINE L1 4753 5362 -804 1924 138 3 3 chr5 95248204 95248494 -104381656 + AluSx SINE Alu 1 290 -22 1737 236 63 32 chr5 95248494 95248867 -104381283 + L1ME LINE L1 5362 5722 -444 879 291 81 29 chr5 95252709 95253156 -104376994 + MLT1J LTR MaLR 25 494 -17 324 383 33 29 chr5 95256179 95256453 -104373697 + L2 LINE L2 2220 2494 -820 1448 149 20 47 chr5 95256499 95256800 -104373350 + L1PB4 LINE L1 5864 6156 0 25 0 0 0 chr5 95256800 95256825 -104373325 + AT_rich Low_complexity Low_complexity 1 25 0 472 286 33 16 chr5 95257334 95257516 -104372634 + L2 LINE L2 3129 3313 0 414 215 30 68 chr5 95257611 95257720 -104372430 - L1MC4 LINE L1 -2 8040 7928 1484 179 32 67 chr5 95257720 95258095 -104372055 - MLT1A1 LTR MaLR -3 362 1 414 215 30 68 chr5 95258095 95258250 -104371900 - L1MC4 LINE L1 -114 7928 7703 317 318 16 0 chr5 95258297 95258423 -104371727 + MLT1L LTR MaLR 483 610 -5 2421 59 0 16 chr5 95258535 95258842 -104371308 + AluY SINE Alu 1 302 -9 236 357 0 0 chr5 95258855 95258911 -104371239 + L2 LINE L2 3246 3301 -12 279 250 44 0 chr5 95259107 95259175 -104370975 - MIR3 SINE MIR -5 203 133 697 294 5 10 chr5 95259525 95259729 -104370421 + MIR SINE MIR 6 208 -54 13196 143 59 7 chr5 95260093 95262391 -104367759 - Tigger1 DNA MER2_type 0 2418 1 3939 92 15 0 chr5 95263480 95264026 -104366124 - MER41A LTR ERV1 0 554 1 225 0 0 0 chr5 95264429 95264454 -104365696 + (CA)n Simple_repeat Simple_repeat 1 25 0 287 208 0 0 chr5 95265155 95265208 -104364942 - L2 LINE L2 0 3313 3261 25 0 0 0 chr5 95266119 95266144 -104364006 + AT_rich Low_complexity Low_complexity 1 25 0 1631 188 45 18 chr5 95266155 95266536 -104363614 + MER67C LTR ERV1 6 403 -243 369 244 107 8 chr5 95266574 95266705 -104363445 + MER67D LTR ERV1 368 511 -3 7096 51 8 0 chr5 95268873 95269843 -104360307 + L1PA7 LINE L1 5175 6151 -3 335 166 24 19 chr5 95270417 95270509 -104359641 - MLT1G LTR MaLR -9 645 509 301 307 39 43 chr5 95270615 95270841 -104359309 - MLT1G3 LTR MaLR -298 232 31 1871 146 6 19 chr5 95273670 95273985 -104356165 + AluJb SINE Alu 1 311 -1 386 314 109 42 chr5 95274913 95275375 -104354775 - L2 LINE L2 -221 3051 2560 484 146 73 0 chr5 95275416 95275512 -104354638 - MER53 DNA DNA 0 189 87 207 162 0 0 chr5 95275514 95275551 -104354599 + (CA)n Simple_repeat Simple_repeat 2 38 0 376 313 90 0 chr5 95275589 95275755 -104354395 - L2 LINE L2 -892 2422 2242 209 265 0 0 chr5 95278336 95278385 -104351765 - L2 LINE L2 -3 3310 3262 206 354 83 0 chr5 95279409 95279505 -104350645 - L2 LINE L2 0 3313 3210 469 193 25 99 chr5 95282381 95282542 -104347608 - FRAM SINE Alu -17 159 11 830 206 0 7 chr5 95282556 95282711 -104347439 - FRAM SINE Alu -13 163 10 1168 173 89 22 chr5 95282711 95283035 -104347115 - Charlie5 DNA MER1_type -11 2601 2256 329 165 0 62 chr5 95283042 95283139 -104347011 - Charlie5 DNA MER1_type -2489 123 33 581 311 28 11 chr5 95283718 95283895 -104346255 - MIR3 SINE MIR -9 199 20 296 229 9 48 chr5 95284576 95284681 -104345469 + L1MC5 LINE L1 7831 7931 -30 581 374 36 21 chr5 95285859 95286188 -104343962 + MLT1K LTR MaLR 7 340 -248 25 0 0 0 chr5 95286366 95286391 -104343759 + AT_rich Low_complexity Low_complexity 1 25 0 24 53 0 0 chr5 95286477 95286515 -104343635 + AT_rich Low_complexity Low_complexity 1 38 0 259 303 124 0 chr5 95286549 95286638 -104343512 - L2 LINE L2 -27 3245 3146 3452 163 122 17 chr5 95286728 95287476 -104342674 + LTR1B LTR ERV1 1 826 0 430 188 59 0 chr5 95287485 95287586 -104342564 + L1MD3 LINE L1 7879 7985 -10 253 200 14 43 chr5 95288198 95288268 -104341882 + MLT1L LTR MaLR 134 201 -414 257 232 0 29 chr5 95288480 95288549 -104341601 + MLT1L LTR MaLR 429 495 -120 33 43 0 0 chr5 95288656 95288703 -104341447 + AT_rich Low_complexity Low_complexity 1 47 0 2461 103 28 11 chr5 95288761 95289119 -104341031 + THE1B LTR MaLR 1 364 0 1907 184 21 0 chr5 95289448 95289785 -104340365 + MER7A DNA MER2_type 2 343 -3 377 267 20 80 chr5 95293220 95293370 -104336780 - LTR16A1 LTR ERVL -313 144 4 379 303 106 76 chr5 95293748 95294154 -104335996 - L2 LINE L2 0 3313 2896 499 355 73 0 chr5 95294218 95294438 -104335712 - L2 LINE L2 -496 2818 2583 227 217 0 0 chr5 95294866 95294912 -104335238 + T-rich Low_complexity Low_complexity 1 46 0 1485 60 0 15 chr5 95294924 95295125 -104335025 - L1PA5 LINE L1 0 6154 5957 339 62 42 0 chr5 95295225 95295273 -104334877 - L1PA5 LINE L1 -490 5664 5615 * 1756 34 0 0 chr5 95295263 95295472 -104334678 + L1PA5 LINE L1 5412 5620 -534 360 0 0 0 chr5 95295654 95295700 -104334450 + L1PA4 LINE L1 6110 6155 0 211 278 44 33 chr5 95295754 95295844 -104334306 - L2 LINE L2 -1004 2310 2220 21 0 0 0 chr5 95296250 95296271 -104333879 + AT_rich Low_complexity Low_complexity 1 21 0 227 239 42 14 chr5 95296639 95296710 -104333440 + MLT1J LTR MaLR 416 488 -23 2357 63 20 0 chr5 95297781 95298082 -104332068 - AluY SINE Alu -4 307 1 352 323 137 0 chr5 95298442 95298566 -104331584 - MIR3 SINE MIR -16 192 52 194 259 19 19 chr5 95298607 95298661 -104331489 + L2 LINE L2 3219 3272 0 213 154 0 0 chr5 95300040 95300079 -104330071 + (TG)n Simple_repeat Simple_repeat 1 39 0 21 36 0 0 chr5 95304050 95304078 -104326072 + AT_rich Low_complexity Low_complexity 1 28 0 209 231 0 39 chr5 95305012 95305064 -104325086 + CT-rich Low_complexity Low_complexity 5 54 0 183 42 0 0 chr5 95305361 95305385 -104324765 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 983 167 22 11 chr5 95305625 95305805 -104324345 - MER5A DNA MER1_type -7 182 1 221 295 151 14 chr5 95307058 95307197 -104322953 + L2 LINE L2 2230 2387 -927 24 53 0 0 chr5 95307364 95307402 -104322748 + AT_rich Low_complexity Low_complexity 1 38 0 329 351 117 13 chr5 95307529 95307760 -104322390 + L3b LINE CR1 1165 1419 -164 222 360 88 41 chr5 95308400 95308547 -104321603 + L2 LINE L2 3106 3259 -13 205 324 42 0 chr5 95308566 95308637 -104321513 + MER5A DNA MER1_type 59 132 -57 698 241 42 6 chr5 95309072 95309238 -104320912 + MIR3 SINE MIR 37 208 0 367 270 51 56 chr5 95310264 95310487 -104319663 + MIR SINE MIR 33 259 -3 810 294 76 39 chr5 95310978 95311414 -104318736 + LTR33 LTR ERVL 1 452 -69 240 243 0 0 chr5 95311980 95312054 -104318096 + (TA)n Simple_repeat Simple_repeat 2 75 0 5560 167 27 57 chr5 95312100 95313067 -104317083 + L1MC1 LINE L1 4929 5843 -490 1727 197 63 21 chr5 95313067 95313447 -104316703 + MSTD LTR MaLR 1 396 0 5560 167 27 57 chr5 95313447 95313922 -104316228 + L1MC1 LINE L1 5843 6331 -2 609 305 153 37 chr5 95315788 95316468 -104313682 - L2 LINE L2 -4 3309 2545 289 318 0 0 chr5 95317012 95317100 -104313050 - MIR SINE MIR -6 256 169 335 362 41 60 chr5 95317250 95317617 -104312533 - L2 LINE L2 -560 2754 2395 327 176 33 11 chr5 95317617 95317708 -104312442 + GA-rich Low_complexity Low_complexity 3 95 0 2002 200 57 55 chr5 95318253 95318671 -104311479 + MLT1D LTR MaLR 13 429 -76 1070 77 0 0 chr5 95318671 95318814 -104311336 - L1PA8 LINE L1 -2 6170 6028 2002 200 57 55 chr5 95318814 95318836 -104311314 + MLT1D LTR MaLR 429 449 -56 997 198 201 63 chr5 95318836 95319184 -104310966 - MSTD LTR MaLR 0 396 1 2002 200 57 55 chr5 95319184 95319232 -104310918 + MLT1D LTR MaLR 449 503 -2 2141 113 0 0 chr5 95319238 95319531 -104310619 - AluY SINE Alu -18 293 1 209 258 0 32 chr5 95319625 95319687 -104310463 + (TG)n Simple_repeat Simple_repeat 1 60 0 230 212 20 121 chr5 95319687 95319786 -104310364 + L1MC4 LINE L1 6615 6703 -1339 299 229 55 0 chr5 95319786 95319895 -104310255 + (TA)n Simple_repeat Simple_repeat 2 116 0 24 0 0 0 chr5 95321024 95321048 -104309102 + AT_rich Low_complexity Low_complexity 1 24 0 520 339 0 0 chr5 95321725 95321890 -104308260 - MIR SINE MIR -62 200 36 246 381 43 14 chr5 95322127 95322266 -104307884 + MIR SINE MIR 114 256 -6 216 271 0 0 chr5 95322547 95322595 -104307555 + (TATG)n Simple_repeat Simple_repeat 2 49 0 1090 176 5 0 chr5 95323258 95323445 -104306705 + MER5A DNA MER1_type 1 188 -1 1646 205 48 11 chr5 95323551 95323927 -104306223 + MLT1B LTR MaLR 1 390 0 678 233 180 10 chr5 95326072 95326278 -104303872 - MIR SINE MIR -11 251 11 28 0 0 0 chr5 95328005 95328033 -104302117 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr5 95328822 95328849 -104301301 + AT_rich Low_complexity Low_complexity 1 27 0 234 278 0 0 chr5 95329560 95329614 -104300536 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 25 0 0 0 chr5 95329855 95329880 -104300270 + AT_rich Low_complexity Low_complexity 1 25 0 284 289 167 0 chr5 95330652 95330742 -104299408 - MIR3 SINE MIR -92 116 12 1187 220 46 25 chr5 95333053 95333376 -104296774 + L1MB1 LINE L1 4809 5138 -1008 1293 75 0 23 chr5 95333379 95333553 -104296597 + AluY SINE Alu 130 299 -12 4861 162 40 10 chr5 95333553 95333887 -104296263 + L1MB1 LINE L1 5132 5455 -713 249 33 0 0 chr5 95333887 95333917 -104296233 + (GAAAA)n Simple_repeat Simple_repeat 4 33 0 4861 162 40 10 chr5 95333917 95334586 -104295564 + L1MB1 LINE L1 5455 6168 0 1708 158 40 37 chr5 95335424 95335798 -104294352 + THE1C LTR MaLR 1 375 0 9799 124 35 17 chr5 95335798 95337349 -104292801 + THE1C-int LTR MaLR 1 1580 0 1937 145 18 49 chr5 95337349 95337736 -104292414 + THE1C LTR MaLR 1 375 0 199 358 143 16 chr5 95338893 95339326 -104290824 + L2 LINE L2 1783 2270 -1044 243 403 8 0 chr5 95339429 95339548 -104290602 + L2 LINE L2 2439 2558 -756 268 258 16 0 chr5 95340483 95340545 -104289605 + L2 LINE L2 3210 3272 0 762 224 67 6 chr5 95341346 95341525 -104288625 - MIR SINE MIR -12 250 61 426 39 0 0 chr5 95342015 95342067 -104288083 + (TG)n Simple_repeat Simple_repeat 2 53 0 24 0 0 0 chr5 95342779 95342803 -104287347 + AT_rich Low_complexity Low_complexity 1 24 0 619 194 0 0 chr5 95343836 95343934 -104286216 - Tigger7 DNA MER2_type -2 2485 2388 1256 214 8 0 chr5 95343940 95344174 -104285976 - Tigger7 DNA MER2_type -491 242 7 439 135 0 0 chr5 95344556 95344630 -104285520 - L1MA6 LINE L1 0 6300 6227 340 85 0 0 chr5 95344637 95344684 -104285466 + L1 LINE L1 4485 4531 -1615 196 337 84 0 chr5 95345348 95345431 -104284719 + MER5A DNA MER1_type 72 161 -28 1981 98 11 0 chr5 95345730 95345995 -104284155 + AluSp SINE Alu 26 293 -20 207 0 0 0 chr5 95345998 95346021 -104284129 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 39 38 0 0 chr5 95346203 95346256 -104283894 + AT_rich Low_complexity Low_complexity 1 53 0 190 211 0 70 chr5 95346436 95346493 -104283657 - L2 LINE L2 0 3313 3261 24 53 0 0 chr5 95348741 95348779 -104281371 + AT_rich Low_complexity Low_complexity 1 38 0 21 57 0 0 chr5 95349550 95349585 -104280565 + AT_rich Low_complexity Low_complexity 1 35 0 1146 279 98 25 chr5 95349653 95350205 -104279945 - MLT1E LTR MaLR 0 593 2 258 316 53 76 chr5 95352123 95352294 -104277856 + MIR SINE MIR 5 171 -91 531 283 31 38 chr5 95352617 95352776 -104277374 - L2 LINE L2 0 3272 3115 182 347 28 0 chr5 95352940 95353012 -104277138 + MIR SINE MIR 182 255 -7 23 33 0 0 chr5 95353418 95353448 -104276702 + AT_rich Low_complexity Low_complexity 1 30 0 6652 67 1 7 chr5 95353545 95354703 -104275447 + L1PA7 LINE L1 5011 6164 0 2347 78 0 3 chr5 95354902 95355196 -104274954 + AluY SINE Alu 3 295 -16 22 70 0 0 chr5 95355367 95355410 -104274740 + AT_rich Low_complexity Low_complexity 1 43 0 279 167 133 0 chr5 95357227 95357287 -104272863 - L1ME4a LINE L1 -70 6051 5984 25 0 0 0 chr5 95357311 95357336 -104272814 + AT_rich Low_complexity Low_complexity 1 25 0 382 308 73 33 chr5 95357384 95357858 -104272292 - L1ME4a LINE L1 -295 5826 5338 842 258 113 33 chr5 95357859 95358225 -104271925 + MER57A LTR ERV1 4 401 -2 383 176 27 0 chr5 95358785 95358859 -104271291 - MLT1D LTR MaLR 0 505 430 1842 219 34 49 chr5 95358865 95359373 -104270777 - MLT1D LTR MaLR 0 505 6 1972 127 79 9 chr5 95359741 95360081 -104270069 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr5 95360091 95360115 -104270035 + AT_rich Low_complexity Low_complexity 1 24 0 38 0 0 0 chr5 95360322 95360360 -104269790 + AT_rich Low_complexity Low_complexity 1 38 0 654 320 161 25 chr5 95360982 95361565 -104268585 + L1MC/D LINE L1 2377 2880 -3266 2216 74 16 13 chr5 95361565 95361875 -104268275 - AluY SINE Alu 0 311 1 654 320 161 25 chr5 95361875 95362279 -104267871 + L1MC/D LINE L1 2880 3498 -2648 301 246 175 16 chr5 95362496 95362679 -104267471 + L1MC/D LINE L1 3729 3940 -2206 26 30 0 0 chr5 95363036 95363069 -104267081 + AT_rich Low_complexity Low_complexity 1 33 0 251 336 9 0 chr5 95363210 95363317 -104266833 + L1MC/D LINE L1 4491 4598 -1548 1350 276 52 2 chr5 95363830 95364251 -104265899 + L1MC/D LINE L1 5318 5759 -2049 258 32 0 0 chr5 95364409 95364440 -104265710 + (CA)n Simple_repeat Simple_repeat 2 32 0 1945 136 74 3 chr5 95364440 95364763 -104265387 - MER7A DNA MER2_type -2 344 1 1338 98 5 20 chr5 95365216 95365419 -104264731 - AluSg/x SINE Alu -6 306 107 1900 216 75 27 chr5 95365724 95366206 -104263944 - MLT1D LTR MaLR 0 505 1 206 284 0 18 chr5 95366659 95366768 -104263382 + T-rich Low_complexity Low_complexity 4 110 0 276 221 0 0 chr5 95367537 95367614 -104262536 + CT-rich Low_complexity Low_complexity 1 77 0 448 88 12 12 chr5 95368589 95368669 -104261481 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 2284 191 35 19 chr5 95369022 95369509 -104260641 - L1MD3 LINE L1 0 7995 7501 12442 218 36 13 chr5 95369597 95371951 -104258199 - L1PA16 LINE L1 -9 6860 4561 1897 167 0 0 chr5 95371951 95372245 -104257905 - AluSx SINE Alu -18 294 1 12442 218 36 13 chr5 95372245 95372510 -104257640 - L1PA16 LINE L1 -2308 4561 4304 192 40 0 0 chr5 95372510 95372535 -104257615 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 12442 218 36 13 chr5 95372535 95375779 -104254371 - L1PA16 LINE L1 -2565 4304 856 22 35 0 0 chr5 95375925 95375954 -104254196 + AT_rich Low_complexity Low_complexity 1 29 0 251 194 11 86 chr5 95376041 95376134 -104254016 + L1MA4A LINE L1 6204 6289 -14 10691 154 21 2 chr5 95376136 95377880 -104252270 - Tigger4(Zombi) DNA MER2_type -950 1781 5 726 158 15 30 chr5 95378035 95378168 -104251982 + AluJb SINE Alu 5 135 -177 4493 29 0 0 chr5 95378168 95378714 -104251436 - L1PA2 LINE L1 -826 5320 4775 7240 17 0 0 chr5 95378714 95379546 -104250604 + L1PA2 LINE L1 5321 6155 0 2498 36 0 7 chr5 95379896 95380199 -104249951 - AluY SINE Alu -10 301 1 302 274 168 0 chr5 95380218 95380313 -104249837 - MIR SINE MIR -62 146 36 3988 156 52 9 chr5 95380383 95381158 -104248992 - L1MC1 LINE L1 -6 6327 5520 389 70 0 18 chr5 95381258 95381315 -104248835 - L1MC1 LINE L1 -840 5493 5438 1786 57 0 4 chr5 95381315 95381545 -104248605 - L1PA5 LINE L1 -4 6150 5922 982 42 0 0 chr5 95381545 95381663 -104248487 + L1PA5 LINE L1 5807 5924 -230 * 3510 247 57 4 chr5 95381658 95382961 -104247189 - L1MC1 LINE L1 -743 5403 4063 618 307 66 16 chr5 95583306 95583815 -104046335 - MER45C DNA AcHobo -6 947 323 562 235 163 6 chr5 95583852 95584018 -104046132 - MER45C DNA AcHobo -740 213 22 396 237 188 39 chr5 95584019 95584226 -104045924 - MIR SINE MIR -10 252 15 2471 47 16 0 chr5 95584262 95584581 -104045569 + L1PA5 LINE L1 5831 6154 0 337 365 19 13 chr5 95585074 95585230 -104044920 - MIR SINE MIR -88 174 18 272 286 13 0 chr5 95585416 95585493 -104044657 - L2 LINE L2 -15 3298 3221 21 0 0 0 chr5 95586068 95586089 -104044061 + AT_rich Low_complexity Low_complexity 1 21 0 198 71 0 0 chr5 95588606 95588634 -104041516 + (TC)n Simple_repeat Simple_repeat 1 28 0 258 81 0 0 chr5 95588634 95588671 -104041479 + (TA)n Simple_repeat Simple_repeat 1 37 0 30 45 0 0 chr5 95589019 95589063 -104041087 + AT_rich Low_complexity Low_complexity 1 44 0 25 65 0 0 chr5 95591233 95591279 -104038871 + AT_rich Low_complexity Low_complexity 1 46 0 782 204 120 0 chr5 95591281 95591506 -104038644 + L1MD2 LINE L1 6106 6357 -2 369 198 62 12 chr5 95593134 95593215 -104036935 + Zaphod DNA AcHobo 2659 2743 -1288 987 254 60 11 chr5 95593273 95593655 -104036495 + Zaphod DNA AcHobo 3621 4021 -10 2369 130 41 19 chr5 95593700 95594116 -104036034 + MSTA LTR MaLR 1 425 -3 196 286 0 83 chr5 95594271 95594355 -104035795 + L2 LINE L2 3184 3260 -12 1516 82 55 5 chr5 95594418 95594637 -104035513 + MER30 DNA MER1_type 1 230 0 22 94 0 0 chr5 95594904 95594968 -104035182 + AT_rich Low_complexity Low_complexity 1 64 0 1701 186 83 63 chr5 95594998 95595456 -104034694 + MLT1C LTR MaLR 1 467 0 189 0 0 0 chr5 95598255 95598276 -104031874 + (T)n Simple_repeat Simple_repeat 1 21 0 233 53 53 0 chr5 95600099 95600137 -104030013 + T-rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr5 95600747 95600775 -104029375 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 95600997 95601021 -104029129 + AT_rich Low_complexity Low_complexity 1 24 0 24 67 0 0 chr5 95601777 95601822 -104028328 + AT_rich Low_complexity Low_complexity 1 45 0 23 0 0 0 chr5 95601976 95601999 -104028151 + AT_rich Low_complexity Low_complexity 1 23 0 26 82 0 0 chr5 95602229 95602290 -104027860 + AT_rich Low_complexity Low_complexity 1 61 0 2204 98 7 3 chr5 95606396 95606692 -104023458 + AluSp SINE Alu 2 298 -15 2535 217 35 18 chr5 95606820 95607370 -104022780 - MER99 DNA DNA -3 825 261 2631 101 3 8 chr5 95607370 95607736 -104022414 + THE1B LTR MaLR 1 364 0 2535 217 35 18 chr5 95607736 95607808 -104022342 - MER99 DNA DNA -567 261 192 21 82 0 0 chr5 95608179 95608228 -104021922 + AT_rich Low_complexity Low_complexity 1 49 0 366 277 20 0 chr5 95608492 95608593 -104021557 - MER99 DNA DNA -724 104 2 24 32 0 0 chr5 95609233 95609264 -104020886 + AT_rich Low_complexity Low_complexity 1 31 0 651 227 175 52 chr5 95610520 95610714 -104019436 + MER58A DNA MER1_type 1 218 -6 634 313 11 0 chr5 95610731 95610913 -104019237 - MER5A DNA MER1_type -5 184 1 21 0 0 0 chr5 95612233 95612254 -104017896 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr5 95612361 95612399 -104017751 + AT_rich Low_complexity Low_complexity 1 38 0 186 319 143 0 chr5 95612446 95612537 -104017613 + MIR SINE MIR 35 138 -124 21 36 0 0 chr5 95613104 95613132 -104017018 + AT_rich Low_complexity Low_complexity 1 28 0 2290 53 16 16 chr5 95614158 95614462 -104015688 - AluY SINE Alu -7 304 1 26 74 0 0 chr5 95615828 95615882 -104014268 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr5 95619749 95619777 -104010373 + AT_rich Low_complexity Low_complexity 1 28 0 212 328 26 69 chr5 95620357 95620473 -104009677 + L2 LINE L2 3162 3272 0 1535 214 72 3 chr5 95620584 95620681 -104009469 - Charlie1 DNA MER1_type 0 2761 2672 11581 36 1 0 chr5 95620681 95622859 -104007291 + L1PA5 LINE L1 3972 6154 0 1535 214 72 3 chr5 95622859 95623149 -104007001 - Charlie1 DNA MER1_type -89 2672 2347 244 357 14 0 chr5 95623151 95623221 -104006929 - Charlie1 DNA MER1_type -2690 71 1 510 30 0 0 chr5 95623295 95623362 -104006788 + L1PA2 LINE L1 6089 6155 0 378 0 0 0 chr5 95623755 95623797 -104006353 + (TA)n Simple_repeat Simple_repeat 1 42 0 22 0 0 0 chr5 95624073 95624095 -104006055 + AT_rich Low_complexity Low_complexity 1 22 0 517 324 128 12 chr5 95624103 95624511 -104005639 + L1ME3A LINE L1 5431 5885 -285 21 36 0 0 chr5 95624547 95624575 -104005575 + AT_rich Low_complexity Low_complexity 1 28 0 201 147 0 0 chr5 95624869 95624903 -104005247 + (TG)n Simple_repeat Simple_repeat 1 34 0 21 0 0 0 chr5 95627337 95627358 -104002792 + AT_rich Low_complexity Low_complexity 1 21 0 215 327 83 68 chr5 95627855 95628121 -104002029 - L2 LINE L2 -14 3299 3030 539 302 149 0 chr5 95628284 95628499 -104001651 - MIR SINE MIR -10 252 6 2294 99 0 0 chr5 95628569 95628872 -104001278 + AluSc SINE Alu 1 303 -6 364 267 176 24 chr5 95630439 95630649 -103999501 - MIR SINE MIR -14 248 7 211 268 0 18 chr5 95630909 95630965 -103999185 + MIR SINE MIR 99 153 -55 1719 149 51 7 chr5 95632810 95632984 -103997166 - AluJb SINE Alu -2 310 116 450 0 0 0 chr5 95632984 95633034 -103997116 + (TG)n Simple_repeat Simple_repeat 2 51 0 1719 149 51 7 chr5 95633034 95633154 -103996996 - AluJb SINE Alu -196 116 3 272 247 138 11 chr5 95633603 95633710 -103996440 + MIR SINE MIR 50 172 -36 768 247 56 9 chr5 95634273 95634495 -103995655 - MIR SINE MIR -2 260 31 520 352 88 11 chr5 95634640 95634992 -103995158 - L2 LINE L2 -1 3312 2934 230 269 17 25 chr5 95635156 95635275 -103994875 + L1M4 LINE L1 2221 2338 -3808 2114 80 17 14 chr5 95635381 95635670 -103994480 - AluY SINE Alu -21 290 1 801 296 125 16 chr5 95635720 95636617 -103993533 + L1M4 LINE L1 2457 3451 -2695 371 298 107 42 chr5 95636674 95637030 -103993120 - LTR16A1 LTR ERVL -70 387 9 1959 173 35 38 chr5 95637906 95638333 -103991817 + MSTB LTR MaLR 1 426 0 2432 61 0 3 chr5 95638508 95638819 -103991331 - AluY SINE Alu -1 310 1 1904 183 145 24 chr5 95639375 95639675 -103990475 + MLT1C LTR MaLR 1 366 -101 1306 216 85 26 chr5 95639675 95640027 -103990123 - MLT1A2 LTR MaLR -1 373 1 1904 183 145 24 chr5 95640027 95640141 -103990009 + MLT1C LTR MaLR 366 465 -2 325 352 84 40 chr5 95640301 95640551 -103989599 + L2 LINE L2 2695 2955 -359 304 261 67 55 chr5 95640591 95640756 -103989394 + L2 LINE L2 3083 3249 -64 1775 148 178 8 chr5 95641152 95641518 -103988632 - MSTA LTR MaLR 0 428 1 211 178 44 0 chr5 95642665 95642710 -103987440 + (CAAAG)n Simple_repeat Simple_repeat 3 49 0 202 294 0 0 chr5 95642678 95642746 -103987404 + A-rich Low_complexity Low_complexity 1 68 0 * 239 214 36 0 chr5 95644861 95644917 -103985233 + (CATA)n Simple_repeat Simple_repeat 2 59 0 382 325 26 52 chr5 95646950 95647144 -103983006 - MER5A DNA MER1_type 0 189 1 22 0 0 0 chr5 95647285 95647307 -103982843 + AT_rich Low_complexity Low_complexity 1 22 0 230 229 24 36 chr5 95647482 95647648 -103982502 + (TAA)n Simple_repeat Simple_repeat 2 165 0 5865 89 19 41 chr5 95647755 95647958 -103982192 + L1PA10 LINE L1 5288 5494 -674 261 0 0 0 chr5 95647958 95647987 -103982163 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 5865 89 19 41 chr5 95647987 95648680 -103981470 + L1PA10 LINE L1 5494 6164 -4 267 190 0 0 chr5 95648695 95648753 -103981397 + (TA)n Simple_repeat Simple_repeat 2 59 0 274 296 80 0 chr5 95648754 95648879 -103981271 + L1ME LINE L1 5612 5746 -375 25 51 0 0 chr5 95648885 95648924 -103981226 + AT_rich Low_complexity Low_complexity 1 39 0 21 57 0 0 chr5 95649273 95649308 -103980842 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr5 95649412 95649447 -103980703 + AT_rich Low_complexity Low_complexity 1 35 0 227 273 0 0 chr5 95649662 95649717 -103980433 - L1ME LINE L1 -433 5737 5683 21 36 0 0 chr5 95650135 95650163 -103979987 + AT_rich Low_complexity Low_complexity 1 28 0 248 301 144 20 chr5 95651075 95651228 -103978922 - L2 LINE L2 -1077 2237 2066 267 272 58 10 chr5 95652578 95652681 -103977469 + MER103 DNA DNA 21 128 -38 1669 155 0 4 chr5 95653657 95653935 -103976215 - L1PA15 LINE L1 -1 6164 5888 545 208 71 36 chr5 95653939 95654107 -103976043 - L1MC3 LINE L1 -170 7615 7442 4403 111 45 0 chr5 95654121 95654786 -103975364 - L1PA8 LINE L1 0 6172 5478 2875 322 107 22 chr5 95655612 95657362 -103972788 - L2 LINE L2 0 3313 1405 2888 240 26 36 chr5 95657435 95658509 -103971641 - L1ME1 LINE L1 -48 6187 5124 953 229 24 10 chr5 95658506 95658798 -103971352 - L1ME1 LINE L1 -1408 4807 4512 * 4736 261 58 24 chr5 95658876 95662866 -103967284 - L1ME1 LINE L1 -1886 4329 22 469 229 41 0 chr5 95662874 95662996 -103967154 - L2 LINE L2 -1905 1409 1283 967 160 27 0 chr5 95663854 95664042 -103966108 - L1MA7 LINE L1 -1 6290 6098 5459 122 33 20 chr5 95664043 95665135 -103965015 + pTR5 LTR ERV1 743 1999 -439 351 238 32 44 chr5 95665135 95665268 -103964882 + LTR30 LTR ERV1 375 475 -94 1449 106 5 5 chr5 95665268 95665486 -103964664 + pTR5 LTR ERV1 177 394 -2044 897 200 10 26 chr5 95665489 95665684 -103964466 - L1MA7 LINE L1 -186 6105 5914 315 167 0 0 chr5 95668236 95668302 -103961848 + (TG)n Simple_repeat Simple_repeat 2 67 0 192 97 0 0 chr5 95669123 95669154 -103960996 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 216 97 0 0 chr5 95672621 95672652 -103957498 + (T)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr5 95674864 95674885 -103955265 + AT_rich Low_complexity Low_complexity 1 21 0 267 79 0 0 chr5 95675587 95675625 -103954525 + (TC)n Simple_repeat Simple_repeat 1 38 0 211 365 74 15 chr5 95677288 95677559 -103952591 + L2 LINE L2 1222 1508 -1806 225 0 0 0 chr5 95677885 95677910 -103952240 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 270 0 0 0 chr5 95678980 95679010 -103951140 + (TTAAA)n Simple_repeat Simple_repeat 3 32 0 2762 215 53 81 chr5 95680445 95681596 -103948554 + L1MB7 LINE L1 725 1843 -4541 423 255 0 0 chr5 95681614 95681720 -103948430 + L1MB7 LINE L1 4518 4623 -1759 1321 196 80 0 chr5 95681742 95681992 -103948158 - AluJo SINE Alu -30 282 13 3764 211 66 4 chr5 95681995 95683688 -103946462 + L1MB7 LINE L1 4612 6404 -16 401 257 118 26 chr5 95683713 95683865 -103946285 + MLT1I LTR MaLR 244 409 0 865 126 0 0 chr5 95683915 95684042 -103946108 + AluSg/x SINE Alu 147 273 -39 237 276 127 45 chr5 95684998 95685132 -103945018 + L2 LINE L2 2707 2851 -463 272 232 61 37 chr5 95685186 95685268 -103944882 + L2 LINE L2 2969 3052 -261 510 220 95 24 chr5 95686295 95686463 -103943687 - MER104 DNA Tc2 0 180 1 24 0 0 0 chr5 95686496 95686520 -103943630 + AT_rich Low_complexity Low_complexity 1 24 0 286 294 59 0 chr5 95687065 95687167 -103942983 + MIR SINE MIR 81 188 -74 287 250 32 8 chr5 95687229 95687314 -103942836 + (TA)n Simple_repeat Simple_repeat 1 91 -36 2790 88 0 5 chr5 95687314 95687689 -103942461 - THE1C LTR MaLR 0 375 3 287 250 32 8 chr5 95687689 95687727 -103942423 + (TA)n Simple_repeat Simple_repeat 91 127 0 24 67 0 0 chr5 95688975 95689020 -103941130 + AT_rich Low_complexity Low_complexity 1 45 0 241 260 14 0 chr5 95689945 95690018 -103940132 + L2 LINE L2 2203 2276 -1038 745 345 117 33 chr5 95690361 95690731 -103939419 - L2 LINE L2 -146 3167 2830 818 202 22 0 chr5 95690731 95690914 -103939236 + MER53 DNA DNA 1 187 -2 745 345 117 33 chr5 95690914 95691303 -103938847 - L2 LINE L2 -483 2830 2349 1802 244 75 17 chr5 95691303 95691836 -103938314 - L1MB8 LINE L1 -12 6166 5603 577 336 70 0 chr5 95691860 95692101 -103938049 - L2 LINE L2 -998 2316 2059 910 282 112 46 chr5 95692405 95692841 -103937309 - L2 LINE L2 -1415 1899 1435 246 345 25 25 chr5 95692879 95692998 -103937152 - L3 LINE CR1 -98 1479 1361 225 0 0 0 chr5 95693259 95693284 -103936866 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 21 36 0 0 chr5 95695157 95695185 -103934965 + AT_rich Low_complexity Low_complexity 1 28 0 430 288 65 20 chr5 95696861 95697014 -103933136 - MLT1J LTR MaLR -10 501 342 348 250 0 0 chr5 95697050 95697130 -103933020 + MIR SINE MIR 60 139 -123 328 317 0 10 chr5 95697388 95697492 -103932658 + MIR SINE MIR 158 260 -2 680 273 163 32 chr5 95697525 95697807 -103932343 - MLT1J LTR MaLR -190 321 3 189 303 76 0 chr5 95698377 95698443 -103931707 + L2 LINE L2 2917 2987 -285 264 307 120 47 chr5 95698902 95699052 -103931098 + MIR SINE MIR 86 246 -16 432 339 105 25 chr5 95699488 95699727 -103930423 - L3 LINE CR1 -760 817 560 22 0 0 0 chr5 95699727 95699749 -103930401 + AT_rich Low_complexity Low_complexity 1 22 0 386 348 59 37 chr5 95700444 95700849 -103929301 + L2 LINE L2 1928 2341 -973 250 260 29 77 chr5 95700887 95700991 -103929159 - L2 LINE L2 0 3272 3174 238 314 90 70 chr5 95701009 95701400 -103928750 + L2 LINE L2 2678 3073 -199 390 291 7 33 chr5 95701541 95701692 -103928458 + LTR41 LTR ERVL 1 147 -626 363 262 203 23 chr5 95701940 95702196 -103927954 + LTR50 LTR ERVL 494 795 0 406 323 92 0 chr5 95702656 95702820 -103927330 - MLT1J2 LTR MaLR -74 376 198 220 318 56 9 chr5 95703311 95703418 -103926732 - MIR SINE MIR 0 262 151 353 320 88 50 chr5 95703902 95704221 -103925929 + L2 LINE L2 2852 3182 -131 1375 276 127 10 chr5 95704369 95704850 -103925300 - MLT1H1 LTR MaLR -2 553 17 1036 167 23 6 chr5 95705558 95705732 -103924418 + AluJo SINE Alu 71 247 -65 217 225 0 0 chr5 95705755 95705795 -103924355 + MIR SINE MIR 210 249 -13 353 260 10 0 chr5 95706175 95706279 -103923871 - L1ME3A LINE L1 -10 6160 6056 32 0 0 0 chr5 95706286 95706318 -103923832 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5 95707836 95707865 -103922285 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 95707965 95707986 -103922164 + AT_rich Low_complexity Low_complexity 1 21 0 1366 65 38 0 chr5 95708188 95708373 -103921777 + L1PA5 LINE L1 5963 6154 0 30 59 0 0 chr5 95709939 95709990 -103920160 + AT_rich Low_complexity Low_complexity 1 51 0 23 68 0 0 chr5 95710502 95710546 -103919604 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 95710568 95710594 -103919556 + AT_rich Low_complexity Low_complexity 1 26 0 26 98 0 0 chr5 95711820 95711902 -103918248 + AT_rich Low_complexity Low_complexity 1 82 0 284 309 62 0 chr5 95712099 95712196 -103917954 - MIR SINE MIR -6 256 154 308 295 33 55 chr5 95712279 95712462 -103917688 - L2 LINE L2 -15 3298 3120 23 33 0 0 chr5 95712469 95712499 -103917651 + AT_rich Low_complexity Low_complexity 1 30 0 614 268 44 49 chr5 95712913 95713118 -103917032 - MIR SINE MIR -1 261 58 493 326 72 14 chr5 95713390 95713611 -103916539 + MIR SINE MIR 3 236 -26 188 67 33 0 chr5 95713774 95713804 -103916346 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2197 99 0 0 chr5 95714999 95715292 -103914858 - AluSg SINE Alu -17 293 1 467 284 31 0 chr5 95716510 95716637 -103913513 + L2 LINE L2 3169 3299 -14 1335 184 80 27 chr5 95717188 95717524 -103912626 - MLT1A1 LTR MaLR 0 365 12 1598 90 161 4 chr5 95717784 95718039 -103912111 + AluSg1 SINE Alu 1 295 -14 269 352 51 56 chr5 95718149 95718345 -103911805 + MIR3 SINE MIR 12 206 -2 206 136 23 0 chr5 95719951 95719995 -103910155 + CT-rich Low_complexity Low_complexity 4 48 0 1986 62 36 11 chr5 95722582 95722900 -103907250 + AluY SINE Alu 1 325 0 21 0 0 0 chr5 95723196 95723217 -103906933 + AT_rich Low_complexity Low_complexity 1 21 0 1619 139 0 0 chr5 95723359 95723589 -103906561 + AluSx SINE Alu 3 232 -80 6869 63 9 0 chr5 95724053 95724940 -103905210 + L1PA7 LINE L1 5256 6150 -4 25 0 0 0 chr5 95724942 95724967 -103905183 + AT_rich Low_complexity Low_complexity 1 25 0 231 355 33 26 chr5 95725108 95725260 -103904890 - L2 LINE L2 0 3313 3161 412 391 88 16 chr5 95725456 95725829 -103904321 - L2 LINE L2 -455 2859 2460 231 320 40 24 chr5 95727236 95727361 -103902789 - MER94 DNA DNA -7 127 1 22 0 0 0 chr5 95729575 95729597 -103900553 + AT_rich Low_complexity Low_complexity 1 22 0 569 301 10 26 chr5 95730456 95730649 -103899501 + MIR SINE MIR 71 260 -2 369 0 0 0 chr5 95731838 95731879 -103898271 + (CA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr5 95733420 95733441 -103896709 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 95734560 95734591 -103895559 + AT_rich Low_complexity Low_complexity 1 31 0 611 255 78 29 chr5 95735121 95735325 -103894825 - L2 LINE L2 -5 3308 3095 240 35 0 0 chr5 95736011 95736040 -103894110 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr5 95736721 95736742 -103893408 + AT_rich Low_complexity Low_complexity 1 21 0 220 297 110 22 chr5 95737695 95737786 -103892364 - L2 LINE L2 -2 3270 3172 895 133 40 0 chr5 95737899 95738050 -103892100 + L1MA4A LINE L1 6009 6165 -138 227 135 0 0 chr5 95738046 95738083 -103892067 - L1MA4 LINE L1 -71 6229 6193 * 333 163 7 7 chr5 95738071 95738143 -103892007 + L1MA4A LINE L1 6145 6219 -84 553 99 50 0 chr5 95738209 95738310 -103891840 + L1MA4A LINE L1 6193 6298 -5 211 209 0 0 chr5 95738812 95738855 -103891295 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 2213 101 0 7 chr5 95741761 95742059 -103888091 - AluSx SINE Alu -16 296 1 571 261 133 17 chr5 95743205 95743446 -103886704 - L2 LINE L2 0 3313 3045 209 208 14 0 chr5 95743626 95743698 -103886452 + (TA)n Simple_repeat Simple_repeat 2 74 0 30 0 0 0 chr5 95749660 95749690 -103880460 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 95749836 95749859 -103880291 + AT_rich Low_complexity Low_complexity 1 23 0 291 28 0 0 chr5 95749893 95749929 -103880221 + (TG)n Simple_repeat Simple_repeat 2 37 0 243 125 0 0 chr5 95749929 95749969 -103880181 + (TA)n Simple_repeat Simple_repeat 2 41 0 24 67 0 0 chr5 95751263 95751308 -103878842 + AT_rich Low_complexity Low_complexity 1 45 0 3933 293 132 24 chr5 95751443 95753129 -103877021 + L2 LINE L2 1030 2970 -343 1704 140 94 26 chr5 95753129 95753480 -103876670 - THE1C LTR MaLR 0 375 1 3933 293 132 24 chr5 95753480 95753865 -103876285 + L2 LINE L2 2970 3312 -1 27 29 0 0 chr5 95753890 95753924 -103876226 + AT_rich Low_complexity Low_complexity 1 34 0 395 326 36 52 chr5 95754489 95754796 -103875354 + HAL1 LINE L1 623 924 -1583 2221 114 3 0 chr5 95755135 95755442 -103874708 + AluSp SINE Alu 5 312 -1 22 56 0 0 chr5 95755701 95755737 -103874413 + AT_rich Low_complexity Low_complexity 1 36 0 2451 142 34 7 chr5 95755804 95756221 -103873929 - MSTA LTR MaLR 0 428 1 25 51 0 0 chr5 95756314 95756353 -103873797 + AT_rich Low_complexity Low_complexity 1 39 0 244 252 28 23 chr5 95756402 95756524 -103873626 + L1ME LINE L1 179 304 -5901 351 330 45 42 chr5 95757058 95757722 -103872428 + L1ME LINE L1 786 1451 -4945 912 231 84 30 chr5 95757737 95757946 -103872204 + L1ME3A LINE L1 5816 6051 -119 1861 108 16 56 chr5 95757946 95758252 -103871898 - AluSc SINE Alu -11 298 5 912 231 84 30 chr5 95758252 95758375 -103871775 + L1ME3A LINE L1 6051 6166 -4 22 0 0 0 chr5 95758528 95758550 -103871600 + AT_rich Low_complexity Low_complexity 1 22 0 1038 240 117 34 chr5 95759420 95759589 -103870561 + MLT1J LTR MaLR 2 156 -355 2008 135 3 0 chr5 95759589 95759878 -103870272 + AluSx SINE Alu 3 292 -20 1038 240 117 34 chr5 95759878 95760179 -103869971 + MLT1J LTR MaLR 156 511 0 587 271 82 78 chr5 95761372 95761691 -103868459 + MLT1H LTR MaLR 73 396 -153 2114 130 9 32 chr5 95761691 95762036 -103868114 + MER1B DNA MER1_type 1 337 0 587 271 82 78 chr5 95762036 95762189 -103867961 + MLT1H LTR MaLR 396 547 -2 22 0 0 0 chr5 95762934 95762956 -103867194 + AT_rich Low_complexity Low_complexity 1 22 0 548 276 70 58 chr5 95763874 95764131 -103866019 - MER102b DNA MER1_type -1 340 81 219 36 0 0 chr5 95764150 95764178 -103865972 + (CA)n Simple_repeat Simple_repeat 1 28 0 493 229 34 0 chr5 95764314 95764432 -103865718 - MER20 DNA MER1_type -49 170 49 623 275 9 68 chr5 95764477 95764699 -103865451 + MIR SINE MIR 48 256 -6 820 202 111 5 chr5 95765502 95765700 -103864450 + MER20 DNA MER1_type 1 219 0 622 323 78 1 chr5 95765820 95766029 -103864121 + MIR SINE MIR 21 241 -21 26 88 0 0 chr5 95767721 95767789 -103862361 + AT_rich Low_complexity Low_complexity 1 68 0 240 189 38 0 chr5 95767885 95767938 -103862212 + (TCTA)n Simple_repeat Simple_repeat 1 55 0 2628 196 15 15 chr5 95768124 95768671 -103861479 - L1MB2 LINE L1 -27 6144 5598 587 179 14 43 chr5 95768652 95768792 -103861358 - L1MB2 LINE L1 -2155 3991 3856 * 402 69 0 0 chr5 95768806 95768864 -103861286 - L1PA8 LINE L1 0 6172 6115 8601 92 6 2 chr5 95768892 95770139 -103860011 - L1P LINE L1 -2741 3405 2154 21 0 0 0 chr5 95770274 95770295 -103859855 + AT_rich Low_complexity Low_complexity 1 21 0 235 242 123 41 chr5 95770411 95770613 -103859537 - L1 LINE L1 -1512 4634 4407 971 235 55 69 chr5 95770613 95770992 -103859158 - MLT1A2 LTR MaLR 0 374 1 235 242 123 41 chr5 95770992 95771033 -103859117 - L1 LINE L1 -1739 4407 4371 1526 157 4 15 chr5 95771342 95771609 -103858541 + AluSx SINE Alu 1 264 -48 604 133 0 18 chr5 95771624 95771737 -103858413 + (GGAA)n Simple_repeat Simple_repeat 2 112 0 2580 195 11 4 chr5 95772181 95772648 -103857502 + MER70A LTR ERVL 3 472 0 258 218 39 64 chr5 95772715 95772793 -103857357 - L2 LINE L2 -4 3309 3234 198 0 0 0 chr5 95773124 95773146 -103857004 + (GCTTG)n Simple_repeat Simple_repeat 2 23 0 436 304 64 0 chr5 95773848 95773973 -103856177 + L2 LINE L2 3173 3305 -8 4156 87 2 0 chr5 95774149 95774702 -103855448 - MER41A LTR ERV1 0 554 1 186 43 0 0 chr5 95775013 95775036 -103855114 + (TA)n Simple_repeat Simple_repeat 2 24 0 312 222 96 52 chr5 95775218 95775353 -103854797 + MIR SINE MIR 122 262 0 21 36 0 0 chr5 95775442 95775470 -103854680 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 95776346 95776375 -103853775 + AT_rich Low_complexity Low_complexity 1 29 0 31 0 0 0 chr5 95777193 95777224 -103852926 + AT_rich Low_complexity Low_complexity 1 31 0 182 206 143 32 chr5 95777978 95778041 -103852109 - MIR SINE MIR -104 104 35 487 178 0 20 chr5 95778773 95778874 -103851276 + FLAM_A SINE Alu 39 137 -5 33 25 0 0 chr5 95779875 95779915 -103850235 + AT_rich Low_complexity Low_complexity 1 40 0 207 356 103 0 chr5 95779915 95780002 -103850148 - MIR SINE MIR -133 129 34 244 250 16 0 chr5 95780772 95780836 -103849314 + T-rich Low_complexity Low_complexity 1 65 0 445 144 19 19 chr5 95780863 95780967 -103849183 + CT-rich Low_complexity Low_complexity 2 105 0 24 0 0 0 chr5 95781054 95781078 -103849072 + AT_rich Low_complexity Low_complexity 1 24 0 31 44 0 0 chr5 95783943 95783988 -103846162 + AT_rich Low_complexity Low_complexity 1 45 0 340 279 8 70 chr5 95784730 95784859 -103845291 - L2 LINE L2 0 3272 3152 1186 261 37 28 chr5 95784888 95785344 -103844806 - MER90 LTR ERV1 -13 601 65 265 311 133 44 chr5 95785479 95785575 -103844575 - L2 LINE L2 -245 3068 2982 2269 97 0 7 chr5 95785575 95785885 -103844265 + AluSc SINE Alu 2 309 0 265 311 133 44 chr5 95785885 95786103 -103844047 - L2 LINE L2 -331 2982 2740 2032 174 34 8 chr5 95786201 95786581 -103843569 + MLT1B LTR MaLR 1 390 0 404 299 176 15 chr5 95787614 95787875 -103842275 - L2 LINE L2 0 3313 3011 30 27 0 0 chr5 95787917 95787954 -103842196 + AT_rich Low_complexity Low_complexity 1 37 0 506 202 104 127 chr5 95788029 95788202 -103841948 - MER45A DNA AcHobo -9 169 1 221 269 141 26 chr5 95788542 95788620 -103841530 + L2 LINE L2 3138 3224 -48 2033 134 3 3 chr5 95789410 95789709 -103840441 + AluSq SINE Alu 1 299 -14 890 95 17 28 chr5 95789925 95790104 -103840046 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 297 0 0 0 chr5 95790104 95790137 -103840013 + (GGAGA)n Simple_repeat Simple_repeat 1 33 0 2004 106 3 3 chr5 95790575 95790879 -103839271 - AluSg SINE Alu 0 304 1 21 0 0 0 chr5 95791888 95791909 -103838241 + AT_rich Low_complexity Low_complexity 1 21 0 261 367 43 14 chr5 95792454 95792593 -103837557 - L2 LINE L2 -1 3271 3129 320 294 46 18 chr5 95793765 95793874 -103836276 + L2 LINE L2 3200 3311 -2 752 245 167 5 chr5 95794202 95794418 -103835732 + MIR SINE MIR 12 262 0 33 56 0 0 chr5 95794570 95794624 -103835526 + AT_rich Low_complexity Low_complexity 1 54 0 359 325 73 68 chr5 95794993 95795100 -103835050 + L1M4 LINE L1 4885 4990 -1156 1980 148 0 0 chr5 95795100 95795391 -103834759 - AluSx SINE Alu -15 297 7 359 325 73 68 chr5 95795391 95795637 -103834513 + L1M4 LINE L1 4990 5240 -906 261 216 60 67 chr5 95795666 95795800 -103834350 + L1M LINE L1 5270 5402 -768 246 32 0 0 chr5 95796339 95796370 -103833780 + (TG)n Simple_repeat Simple_repeat 2 32 0 1198 249 66 21 chr5 95796445 95796870 -103833280 - L1MB8 LINE L1 -1 6177 5734 330 245 3 8 chr5 95796890 95796975 -103833175 + HAL1b LINE L1 1227 1306 -42 252 198 37 12 chr5 95797349 95797430 -103832720 + (TA)n Simple_repeat Simple_repeat 2 84 0 756 169 84 0 chr5 95797986 95798128 -103832022 - Tigger1 DNA MER2_type -2233 185 32 1993 119 3 23 chr5 95798384 95798694 -103831456 + AluSg SINE Alu 1 304 -6 1551 177 67 51 chr5 95798741 95799131 -103831019 - MSTD LTR MaLR 0 396 1 331 316 151 0 chr5 95800828 95800980 -103829170 + MIR SINE MIR 88 262 0 2204 97 3 3 chr5 95801128 95801436 -103828714 - AluSg SINE Alu -2 308 1 394 271 0 73 chr5 95802873 95803024 -103827126 - MER117 DNA MER1_type -40 157 18 251 225 14 0 chr5 95803245 95803316 -103826834 + GA-rich Low_complexity Low_complexity 2 73 0 2286 197 47 20 chr5 95803347 95803415 -103826735 - MLT1D LTR MaLR 0 505 440 2309 95 0 0 chr5 95803415 95803710 -103826440 + AluSg SINE Alu 3 297 -13 2286 197 47 20 chr5 95803710 95804133 -103826017 - MLT1D LTR MaLR -65 440 1 482 287 36 84 chr5 95804254 95804505 -103825645 + MIR SINE MIR 3 241 -21 45 34 0 0 chr5 95805604 95805663 -103824487 + AT_rich Low_complexity Low_complexity 1 59 0 452 176 24 0 chr5 95806281 95806366 -103823784 + FLAM_A SINE Alu 11 97 -45 222 37 0 0 chr5 95806366 95806393 -103823757 + (GA)n Simple_repeat Simple_repeat 2 28 0 48 98 0 0 chr5 95806413 95806566 -103823584 + AT_rich Low_complexity Low_complexity 1 153 0 370 263 0 0 chr5 95806770 95806850 -103823300 - MER117 DNA MER1_type -117 80 1 252 281 60 78 chr5 95807084 95807301 -103822849 - L2 LINE L2 -4 3309 3097 1300 293 20 45 chr5 95807329 95807886 -103822264 + L1MCb LINE L1 14 556 -5489 941 255 64 13 chr5 95807982 95808280 -103821870 + L1MCb LINE L1 570 882 -5163 756 125 3 7 chr5 95808280 95808399 -103821751 - MSTA LTR MaLR 0 428 314 1015 173 107 29 chr5 95808458 95808715 -103821435 - MSTA LTR MaLR -76 292 46 340 193 23 0 chr5 95808725 95808813 -103821337 + L1MCb LINE L1 877 966 -5079 1148 203 21 63 chr5 95808823 95809158 -103820992 + LTR29 LTR ERV1 12 332 -290 730 174 192 0 chr5 95809221 95809388 -103820762 + LTR51 LTR ERV1 130 328 -343 1004 174 64 38 chr5 95809389 95809624 -103820526 + LTR48B LTR ERV1 404 644 0 1404 199 32 136 chr5 95809626 95809944 -103820206 + LTR48B-int LTR ERV1 1 351 -7186 2996 143 77 63 chr5 95809944 95810275 -103819875 + LTR51 LTR ERV1 1 326 -345 2235 113 0 0 chr5 95810275 95810584 -103819566 - AluY SINE Alu -2 309 1 2996 143 77 63 chr5 95810584 95810914 -103819236 + LTR51 LTR ERV1 326 671 0 1404 199 32 136 chr5 95810914 95811212 -103818938 + LTR48B-int LTR ERV1 351 2064 -5473 333 109 0 0 chr5 95811249 95811295 -103818855 - MER31-int LTR ERV1 -963 3973 3928 2136 262 50 57 chr5 95811326 95812174 -103817976 + LTR48B-int LTR ERV1 448 1289 -5042 350 255 9 19 chr5 95812235 95812341 -103817809 + LTR48B-int LTR ERV1 1288 1392 -4939 192 40 0 0 chr5 95812902 95812927 -103817223 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 953 252 73 8 chr5 95813052 95813298 -103816852 + LTR48B-int LTR ERV1 1792 2053 -4278 * 4721 201 71 59 chr5 95813297 95814878 -103815272 + LTR48B-int LTR ERV1 4858 6167 -164 2359 209 76 20 chr5 95814983 95815573 -103814577 + LTR48B LTR ERV1 2 624 -20 1349 252 110 56 chr5 95815573 95816636 -103813514 + L1MCb LINE L1 1677 2681 -3883 2178 105 0 0 chr5 95816636 95816931 -103813219 + AluSc SINE Alu 6 300 -9 1349 252 110 56 chr5 95816931 95817009 -103813141 + L1MCb LINE L1 2681 2753 -3811 708 194 0 22 chr5 95817009 95817143 -103813007 + FLAM_C SINE Alu 1 131 -2 1349 252 110 56 chr5 95817143 95817585 -103812565 + L1MCb LINE L1 2753 3195 -3369 2979 228 27 35 chr5 95817656 95817722 -103812428 + L1MCb LINE L1 3940 4005 -2559 2333 69 10 0 chr5 95817722 95818027 -103812123 - AluY SINE Alu -3 308 1 2979 228 27 35 chr5 95818027 95818306 -103811844 + L1MCb LINE L1 4005 4285 -2279 1789 204 76 8 chr5 95818306 95818703 -103811447 + MSTB LTR MaLR 1 424 -2 2979 228 27 35 chr5 95818703 95819201 -103810949 + L1MCb LINE L1 4285 4777 -1787 1350 252 47 32 chr5 95819236 95819431 -103810719 - L1M4 LINE L1 -1224 4922 4731 1807 137 14 90 chr5 95819431 95819796 -103810354 - MER1B DNA MER1_type 0 337 1 1350 252 47 32 chr5 95819796 95820132 -103810018 - L1M4 LINE L1 -1415 4731 4383 1284 209 25 9 chr5 95820137 95820453 -103809697 - L1M4 LINE L1 -609 5835 5515 550 158 42 0 chr5 95820457 95820552 -103809598 + MSTC LTR MaLR 1 99 -329 4102 256 88 39 chr5 95820584 95822159 -103807991 + MST-int LTR MaLR 1 1651 0 3089 132 2 0 chr5 95822203 95822681 -103807469 - L1PA13 LINE L1 -8 6155 5677 17196 196 14 10 chr5 95822681 95826274 -103803876 - L1PA13 LINE L1 -1026 5120 1515 4595 230 38 23 chr5 95826278 95827842 -103802308 - L1M4 LINE L1 -1388 5018 3471 5090 182 22 33 chr5 95827863 95828926 -103801224 - MER11C LTR ERVK 0 1071 21 1619 176 11 0 chr5 95828944 95829205 -103800945 - AluJo SINE Alu -48 264 1 2367 228 31 25 chr5 95829213 95829848 -103800302 - L1M4 LINE L1 -2931 3475 2834 2005 142 28 3 chr5 95829848 95830208 -103799942 + L1MA4 LINE L1 5928 6296 -4 2367 228 31 25 chr5 95830208 95830356 -103799794 - L1M4 LINE L1 -3572 2834 2688 597 281 109 30 chr5 95830342 95830709 -103799441 - L1M4 LINE L1 -5241 1168 773 * 1526 153 113 0 chr5 95832138 95832420 -103797730 + MER7A DNA MER2_type 1 312 -34 182 403 75 19 chr5 95832482 95832641 -103797509 - MIR3 SINE MIR -38 170 3 45 75 0 0 chr5 95833536 95833630 -103796520 + AT_rich Low_complexity Low_complexity 1 94 0 30 27 0 0 chr5 95838709 95838746 -103791404 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr5 95840065 95840096 -103790054 + AT_rich Low_complexity Low_complexity 1 31 0 48 18 0 0 chr5 95840198 95840253 -103789897 + AT_rich Low_complexity Low_complexity 1 55 0 270 338 36 36 chr5 95843830 95844032 -103786118 + MIR SINE MIR 19 215 -47 230 231 19 19 chr5 95844976 95845080 -103785070 + GA-rich Low_complexity Low_complexity 3 106 0 209 386 30 0 chr5 95845463 95845564 -103784586 - MIR SINE MIR -65 143 40 184 300 0 0 chr5 95846395 95846445 -103783705 - L2 LINE L2 -9 3304 3255 * 458 288 8 8 chr5 95846443 95846561 -103783589 - MIR SINE MIR -102 160 43 45 0 0 0 chr5 95846816 95846861 -103783289 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr5 95846893 95846915 -103783235 + AT_rich Low_complexity Low_complexity 1 22 0 2529 272 111 6 chr5 95847206 95848074 -103782076 + L1MEc LINE L1 24 982 -5414 226 326 41 0 chr5 95848117 95848215 -103781935 + L1MEc LINE L1 1127 1228 -4990 * 2200 273 17 26 chr5 95848212 95848907 -103781243 + L1ME1 LINE L1 5473 6161 -5 26 30 0 0 chr5 95849290 95849323 -103780827 + AT_rich Low_complexity Low_complexity 1 33 0 243 370 44 15 chr5 95849637 95849772 -103780378 + L2 LINE L2 2619 2757 -557 204 345 129 17 chr5 95849914 95850030 -103780120 - L2 LINE L2 -619 2695 2567 626 224 88 133 chr5 95850207 95850655 -103779495 + MER52A LTR ERV1 1 1232 -130 732 286 79 24 chr5 95850808 95851249 -103778901 - LTR33 LTR ERVL -8 513 3 482 313 56 11 chr5 95851424 95851603 -103778547 + MER5A DNA MER1_type 3 189 0 21 82 0 0 chr5 95852447 95852496 -103777654 + AT_rich Low_complexity Low_complexity 1 49 0 24 32 0 0 chr5 95852598 95852629 -103777521 + AT_rich Low_complexity Low_complexity 1 31 0 469 241 43 75 chr5 95852638 95852825 -103777325 - MIR SINE MIR -16 246 66 211 312 11 43 chr5 95852829 95852922 -103777228 - MIR SINE MIR -121 141 52 21 0 0 0 chr5 95853519 95853540 -103776610 + AT_rich Low_complexity Low_complexity 1 21 0 187 293 79 79 chr5 95853573 95853802 -103776348 - L2 LINE L2 -2462 852 624 3109 149 91 10 chr5 95854589 95855185 -103774965 - LTR9B LTR ERV1 0 644 1 1601 156 4 0 chr5 95855513 95855783 -103774367 + L1PA16 LINE L1 5895 6165 -1 1553 111 18 0 chr5 95856045 95856271 -103773879 - L1PA10 LINE L1 -8 6160 5931 2603 97 58 21 chr5 95856271 95856703 -103773447 + LTR7 LTR ERV1 1 448 -2 16754 98 33 19 chr5 95856705 95859903 -103770247 + HERVH LTR ERV1 1 2995 -4718 937 128 20 0 chr5 95859882 95860030 -103770120 + HERVH LTR ERV1 3140 3290 -4423 * 3354 111 4 6 chr5 95860020 95860523 -103769627 + HERVH LTR ERV1 3492 3993 -3720 4237 139 0 31 chr5 95860525 95861208 -103768942 + HERVH LTR ERV1 4488 5149 -2564 1398 119 18 9 chr5 95861209 95861427 -103768723 + HERVH LTR ERV1 5600 5819 -1894 * 1802 87 62 0 chr5 95861425 95861700 -103768450 + HERVH LTR ERV1 7322 7613 -100 22421 171 49 18 chr5 95861700 95861798 -103768352 - L1PA10 LINE L1 -233 6250 6157 2649 90 58 21 chr5 95861798 95862230 -103767920 + LTR7 LTR ERV1 1 448 -2 22421 171 49 18 chr5 95862230 95867018 -103763132 - L1PA10 LINE L1 -326 6157 1181 207 0 0 0 chr5 95867018 95867041 -103763109 + (TTG)n Simple_repeat Simple_repeat 1 23 0 22421 171 49 18 chr5 95867041 95868251 -103761899 - L1PA10 LINE L1 -5302 1181 10 195 256 0 77 chr5 95868606 95868684 -103761466 + MIR SINE MIR 10 81 -181 276 257 89 30 chr5 95868742 95868843 -103761307 + MIR SINE MIR 104 210 -52 845 230 68 23 chr5 95869719 95869991 -103760159 + MIR SINE MIR 7 259 -3 1554 147 0 0 chr5 95871666 95871904 -103758246 + AluSg/x SINE Alu 72 309 -3 324 244 87 55 chr5 95872334 95872588 -103757562 + L1ME LINE L1 5574 5835 -286 222 231 0 0 chr5 95873012 95873064 -103757086 + T-rich Low_complexity Low_complexity 1 52 0 21 57 0 0 chr5 95874867 95874902 -103755248 + AT_rich Low_complexity Low_complexity 1 35 0 621 308 115 40 chr5 95875193 95875745 -103754405 - L1ME4a LINE L1 -6 6115 5517 858 336 74 24 chr5 95879877 95880416 -103749734 + ERVL LTR ERVL 3694 4259 -1505 195 283 0 0 chr5 95881085 95881131 -103749019 - L3 LINE CR1 -14 1563 1518 334 291 91 9 chr5 95881664 95881774 -103748376 - L2 LINE L2 -3 3310 3192 243 284 60 60 chr5 95887022 95887138 -103743012 + L2 LINE L2 3181 3296 -17 598 95 9 9 chr5 95887187 95887292 -103742858 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 24 32 0 0 chr5 95887485 95887516 -103742634 + AT_rich Low_complexity Low_complexity 1 31 0 284 0 28 0 chr5 95888020 95888056 -103742094 + (GTTTG)n Simple_repeat Simple_repeat 2 38 0 1294 203 13 47 chr5 95889627 95889927 -103740223 - AluJo SINE Alu -22 290 1 723 218 68 0 chr5 95890952 95891099 -103739051 + AluJb SINE Alu 135 291 -21 38 51 0 0 chr5 95893734 95893793 -103736357 + AT_rich Low_complexity Low_complexity 1 59 0 2235 69 69 0 chr5 95895173 95895463 -103734687 - AluY SINE Alu -1 310 1 212 224 13 53 chr5 95895576 95895652 -103734498 + (TATATG)n Simple_repeat Simple_repeat 1 73 0 1486 95 134 24 chr5 95898121 95898374 -103731776 + AluY SINE Alu 1 281 -30 1733 79 0 36 chr5 95898586 95898838 -103731312 + AluSc SINE Alu 66 308 -1 334 200 22 22 chr5 95899105 95899195 -103730955 + LTR67 LTR ERVL 468 557 0 2024 109 14 0 chr5 95899390 95899573 -103730577 - AluSg SINE Alu 0 308 118 405 0 0 0 chr5 95899573 95899618 -103730532 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 2024 109 14 0 chr5 95899618 95899738 -103730412 - AluSg SINE Alu -190 118 1 1152 189 0 34 chr5 95901109 95901361 -103728789 - AluJb SINE Alu 0 329 85 12726 168 28 82 chr5 95901466 95903128 -103727022 - L1MA6 LINE L1 0 6942 5190 1974 170 0 0 chr5 95903128 95903439 -103726711 - AluSx SINE Alu -1 311 1 12726 168 28 82 chr5 95903439 95906257 -103723893 - L1MA6 LINE L1 -1752 5190 2724 573 288 6 6 chr5 95906249 95906419 -103723731 - L1 LINE L1 -3488 2658 2489 * 4418 273 72 61 chr5 95906424 95909410 -103720740 - L1MA6 LINE L1 -4075 2713 3 186 133 0 0 chr5 95909519 95909549 -103720601 + (TCTA)n Simple_repeat Simple_repeat 3 32 0 222 105 0 0 chr5 95910272 95910310 -103719840 + (CA)n Simple_repeat Simple_repeat 1 38 0 1990 85 0 42 chr5 95911013 95911296 -103718854 - AluSg SINE Alu 0 310 40 22 0 0 0 chr5 95914161 95914183 -103715967 + AT_rich Low_complexity Low_complexity 1 22 0 192 77 0 0 chr5 95915384 95915410 -103714740 + (TTA)n Simple_repeat Simple_repeat 2 27 0 283 289 13 13 chr5 95917804 95917880 -103712270 - L2 LINE L2 -4 3268 3193 21 0 0 0 chr5 95919343 95919364 -103710786 + AT_rich Low_complexity Low_complexity 1 21 0 1644 225 78 12 chr5 95920430 95920932 -103709218 - L1M4 LINE L1 -3290 2856 2322 1485 217 121 17 chr5 95921255 95921661 -103708489 + MLT1C LTR MaLR 7 454 -13 788 238 0 6 chr5 95921707 95921871 -103708279 - MLT1A2 LTR MaLR 0 374 212 7695 28 0 0 chr5 95924368 95925938 -103704212 - L1PA3 LINE L1 0 6155 4586 5531 27 6 5 chr5 95925938 95926600 -103703550 + L1PA3 LINE L1 3930 4592 -1554 1916 129 36 0 chr5 95926783 95927061 -103703089 + AluSq SINE Alu 1 288 -25 990 185 0 15 chr5 95927080 95927275 -103702875 + MER63 DNA MER1_type 87 278 -783 2101 235 32 11 chr5 95927323 95927855 -103702295 + MER63 DNA MER1_type 518 1060 0 261 387 57 0 chr5 95928162 95928286 -103701864 - L2 LINE L2 -8 3305 3175 228 286 0 0 chr5 95928851 95928921 -103701229 + MER94 DNA DNA 1 70 -64 489 301 39 29 chr5 95930813 95931019 -103699131 - L2 LINE L2 -908 2406 2199 275 314 196 13 chr5 95932410 95932563 -103697587 + MIR SINE MIR 34 214 -48 2177 110 3 19 chr5 95933625 95933935 -103696215 + AluSx SINE Alu 3 307 -5 867 307 37 79 chr5 95933944 95934400 -103695750 + MER115 DNA AcHobo 11 447 -246 1163 301 55 28 chr5 95935272 95935780 -103694370 - MARNA DNA Mariner -21 565 44 514 274 95 22 chr5 95936081 95936355 -103693795 + L1ME LINE L1 5508 5801 -320 216 0 0 0 chr5 95936505 95936529 -103693621 + (TG)n Simple_repeat Simple_repeat 1 24 0 26 30 0 0 chr5 95937170 95937203 -103692947 + AT_rich Low_complexity Low_complexity 1 33 0 1129 255 92 59 chr5 95937987 95938485 -103691665 - MLT1H1 LTR MaLR 0 555 1 468 179 0 12 chr5 95938778 95938862 -103691288 - AluJ/FLAM SINE Alu -229 83 1 270 0 0 0 chr5 95938924 95938954 -103691196 + (TG)n Simple_repeat Simple_repeat 1 30 0 272 274 215 15 chr5 95938954 95939089 -103691061 + MIR3 SINE MIR 32 193 -15 248 311 76 25 chr5 95939131 95939250 -103690900 + MIR SINE MIR 4 128 -134 230 245 0 0 chr5 95940827 95940876 -103689274 + CT-rich Low_complexity Low_complexity 2 50 0 40 49 0 0 chr5 95941170 95941231 -103688919 + AT_rich Low_complexity Low_complexity 1 61 0 213 235 0 0 chr5 95942545 95942596 -103687554 + A-rich Low_complexity Low_complexity 1 51 0 306 0 0 0 chr5 95942668 95942702 -103687448 + (CA)n Simple_repeat Simple_repeat 2 35 0 222 91 0 0 chr5 95945035 95945068 -103685082 + (TG)n Simple_repeat Simple_repeat 1 33 0 311 254 53 53 chr5 95945995 95946046 -103684104 + MIR SINE MIR 57 107 -155 1961 157 0 7 chr5 95946046 95946345 -103683805 - AluSx SINE Alu -15 297 1 311 254 53 53 chr5 95946345 95946407 -103683743 + MIR SINE MIR 106 170 -92 423 297 90 7 chr5 95946465 95946620 -103683530 - LTR33 LTR ERVL -343 178 11 207 451 40 0 chr5 95946695 95946870 -103683280 - L2 LINE L2 -216 3056 2875 1766 143 72 39 chr5 95947432 95947795 -103682355 - THE1C LTR MaLR 0 375 1 24 32 0 0 chr5 95948232 95948263 -103681887 + AT_rich Low_complexity Low_complexity 1 31 0 245 324 0 14 chr5 95948522 95948596 -103681554 - MIR SINE MIR -137 125 53 28 0 0 0 chr5 95949898 95949926 -103680224 + AT_rich Low_complexity Low_complexity 1 28 0 201 39 0 0 chr5 95950156 95950182 -103679968 + (TA)n Simple_repeat Simple_repeat 2 27 0 25 65 0 0 chr5 95951863 95951909 -103678241 + AT_rich Low_complexity Low_complexity 1 46 0 599 271 90 0 chr5 95953587 95953775 -103676375 + MER63A DNA MER1_type 2 206 -4 304 265 153 0 chr5 95954177 95954275 -103675875 + MER94 DNA DNA 1 113 -21 209 233 0 0 chr5 95955290 95955333 -103674817 + (TA)n Simple_repeat Simple_repeat 2 44 0 198 208 0 0 chr5 95960228 95960276 -103669874 + (TA)n Simple_repeat Simple_repeat 1 48 0 241 236 28 42 chr5 95960277 95960349 -103669801 - L2 LINE L2 0 3272 3202 302 342 111 28 chr5 95960751 95961184 -103668966 - L2 LINE L2 -555 2759 2291 207 0 0 0 chr5 95961187 95961210 -103668940 + (TTG)n Simple_repeat Simple_repeat 2 24 0 776 179 0 8 chr5 95961228 95961362 -103668788 - FLAM_C SINE Alu 0 133 1 207 296 102 61 chr5 95961444 95961542 -103668608 - L2 LINE L2 -47 3266 3165 395 306 8 25 chr5 95962027 95962148 -103668002 - L2 LINE L2 -6 3266 3148 1670 168 52 17 chr5 95962217 95962562 -103667588 - L1MB5 LINE L1 -165 6009 5653 22 0 0 0 chr5 95963900 95963922 -103666228 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 95966246 95966266 -103663884 + (GGATG)n Simple_repeat Simple_repeat 3 22 0 1101 75 0 0 chr5 95969263 95969409 -103660741 + L1PA8 LINE L1 6024 6169 -3 462 361 62 29 chr5 95969654 95970222 -103659928 - L2 LINE L2 -227 3045 2453 636 250 45 112 chr5 95970823 95971199 -103658951 + MLT1J LTR MaLR 100 450 -61 21 0 0 0 chr5 95971227 95971248 -103658902 + AT_rich Low_complexity Low_complexity 1 21 0 596 251 40 40 chr5 95971267 95971442 -103658708 - MIR SINE MIR -13 249 75 2250 103 3 3 chr5 95972230 95972541 -103657609 + AluY SINE Alu 1 311 0 1965 191 128 5 chr5 95973401 95973831 -103656319 - MLT1D LTR MaLR -22 483 1 231 231 8 16 chr5 95975170 95975291 -103654859 + CT-rich Low_complexity Low_complexity 2 121 0 369 43 0 0 chr5 95975291 95975338 -103654812 + (CA)n Simple_repeat Simple_repeat 1 47 0 1509 146 18 15 chr5 95975345 95975619 -103654531 + THE1C LTR MaLR 95 369 -6 297 51 0 0 chr5 95975619 95975658 -103654492 + (CA)n Simple_repeat Simple_repeat 1 39 0 725 225 19 62 chr5 95975800 95976009 -103654141 - L2 LINE L2 0 3313 3114 527 277 18 42 chr5 95976331 95976497 -103653653 + MIR3 SINE MIR 2 163 -45 3623 191 100 25 chr5 95976784 95977574 -103652576 + MER21B LTR ERV1 5 853 -10 13479 30 7 0 chr5 95978575 95980940 -103649210 + L1PA5 LINE L1 3776 6148 -6 183 258 163 68 chr5 95981591 95981781 -103648369 - L2 LINE L2 -2499 815 608 268 309 51 67 chr5 95984102 95984280 -103645870 + MIR3 SINE MIR 3 177 -31 187 380 98 18 chr5 95984976 95985139 -103645011 - L3 LINE CR1 -763 814 639 204 245 19 0 chr5 95985327 95985380 -103644770 + A-rich Low_complexity Low_complexity 6 59 0 562 308 32 16 chr5 95986389 95986639 -103643511 + L3 LINE CR1 517 770 -807 757 226 11 6 chr5 95988115 95988292 -103641858 - MER5B DNA MER1_type 0 178 1 23 33 0 0 chr5 95989117 95989147 -103641003 + AT_rich Low_complexity Low_complexity 1 30 0 1664 211 91 17 chr5 95991322 95991683 -103638467 - MLT1E LTR MaLR 0 593 206 202 170 264 0 chr5 95991810 95991863 -103638287 + MIR SINE MIR 185 251 -11 203 297 31 0 chr5 95991995 95992059 -103638091 - MER5A DNA MER1_type -35 154 89 2910 163 14 9 chr5 95992719 95993285 -103636865 - L1MA7 LINE L1 -1379 4767 4199 * 5251 162 18 38 chr5 95993265 95993577 -103636573 + L1MA7 LINE L1 4750 5067 -1224 1928 166 0 10 chr5 95993577 95993891 -103636259 + AluSx SINE Alu 1 311 -1 5251 162 18 38 chr5 95993891 95995143 -103635007 + L1MA7 LINE L1 5067 6279 -12 415 294 23 73 chr5 95997108 95997285 -103632865 - MIR3 SINE MIR -21 187 20 528 220 17 169 chr5 95997396 95997691 -103632459 - MIR SINE MIR -1 261 12 474 171 9 19 chr5 95997786 95997891 -103632259 + L1MA4 LINE L1 6193 6296 -4 41 0 0 0 chr5 95998841 95998882 -103631268 + AT_rich Low_complexity Low_complexity 1 41 0 686 153 15 23 chr5 95998977 95999108 -103631042 - FLAM_A SINE Alu 0 133 4 200 270 54 40 chr5 96000161 96000235 -103629915 + MIR3 SINE MIR 82 156 -52 38 0 0 0 chr5 96001542 96001580 -103628570 + AT_rich Low_complexity Low_complexity 1 38 0 379 247 206 14 chr5 96002378 96002524 -103627626 + MIR SINE MIR 65 238 -24 323 250 27 135 chr5 96002564 96002712 -103627438 + L2 LINE L2 3182 3313 0 1523 195 0 17 chr5 96003989 96004276 -103625874 + AluJb SINE Alu 1 282 -30 218 148 62 25 chr5 96004418 96004499 -103625651 + (TTATA)n Simple_repeat Simple_repeat 1 84 0 361 227 0 34 chr5 96004505 96004593 -103625557 - MIR SINE MIR -82 180 96 273 236 230 47 chr5 96007189 96007337 -103622813 - MER5B DNA MER1_type 0 178 4 259 330 58 0 chr5 96007407 96007510 -103622640 - L2 LINE L2 -2518 796 688 * 260 289 150 39 chr5 96007501 96007681 -103622469 - L3 LINE CR1 -458 1119 920 209 135 27 0 chr5 96007692 96007729 -103622421 + A-rich Low_complexity Low_complexity 4 41 0 1337 179 34 0 chr5 96007968 96008203 -103621947 - AluJo SINE Alu -69 243 1 3456 140 2 6 chr5 96008296 96008825 -103621325 - MER1A DNA MER1_type 0 527 1 2064 137 52 0 chr5 96009432 96009775 -103620375 + MER46B DNA MER2_type 1 236 0 1218 295 76 20 chr5 96009806 96010447 -103619703 - L1MC4a LINE L1 -1540 6268 5592 410 289 141 32 chr5 96010514 96010568 -103619582 - L1MC4a LINE L1 -2367 3779 3732 1594 205 39 16 chr5 96010568 96010949 -103619201 + MLT1B LTR MaLR 1 390 0 410 289 141 32 chr5 96010949 96011885 -103618265 - L1MC4a LINE L1 -2414 3732 2681 1247 237 68 64 chr5 96012344 96012620 -103617530 - LTR40b LTR ERVL 0 462 182 2469 68 3 0 chr5 96012620 96012928 -103617222 - AluY SINE Alu 0 311 3 1247 237 68 64 chr5 96012928 96013106 -103617044 - LTR40b LTR ERVL -280 182 6 26 50 0 0 chr5 96013351 96013391 -103616759 + AT_rich Low_complexity Low_complexity 1 40 0 246 243 175 42 chr5 96013413 96013602 -103616548 + HAL1b LINE L1 703 916 -432 289 264 43 46 chr5 96013666 96013926 -103616224 + HAL1b LINE L1 761 2411 -96 25 65 0 0 chr5 96014007 96014053 -103616097 + AT_rich Low_complexity Low_complexity 1 46 0 234 324 106 14 chr5 96014589 96014731 -103615419 + MIR SINE MIR 43 197 -65 633 341 83 30 chr5 96014843 96015312 -103614838 - L2 LINE L2 0 3313 2820 354 243 96 52 chr5 96015381 96015517 -103614633 - MIR SINE MIR 0 262 121 306 206 68 0 chr5 96015724 96015797 -103614353 - MIR SINE MIR 0 262 185 203 407 29 26 chr5 96017281 96017554 -103612596 + L2 LINE L2 2098 2371 -943 296 91 23 0 chr5 96017725 96017777 -103612373 - MLT2B2 LTR ERVL -2 513 399 2030 191 47 63 chr5 96017812 96018237 -103611913 - MLT2B1 LTR ERVL -35 485 68 2157 114 79 15 chr5 96018237 96018579 -103611571 + THE1B LTR MaLR 1 364 0 2030 191 47 63 chr5 96018579 96018646 -103611504 - MLT2B1 LTR ERVL -452 68 1 229 242 145 89 chr5 96019352 96019476 -103610674 + MIR SINE MIR 32 162 -100 * 379 264 145 43 chr5 96019461 96019696 -103610454 - L2 LINE L2 -10 3303 3045 245 192 202 61 chr5 96019699 96019798 -103610352 + MIR SINE MIR 149 261 -1 319 311 66 5 chr5 96021134 96021346 -103608804 - L1ME4a LINE L1 -171 5950 5726 216 214 0 0 chr5 96021447 96021489 -103608661 + (TA)n Simple_repeat Simple_repeat 1 42 0 860 257 119 10 chr5 96021539 96021842 -103608308 - MER46C DNA MER2_type -2 336 1 21 36 0 0 chr5 96023172 96023200 -103606950 + AT_rich Low_complexity Low_complexity 1 28 0 43 76 0 0 chr5 96023982 96024074 -103606076 + AT_rich Low_complexity Low_complexity 1 92 0 27 0 0 0 chr5 96024153 96024180 -103605970 + AT_rich Low_complexity Low_complexity 1 27 0 584 313 112 13 chr5 96024210 96024443 -103605707 + MIR SINE MIR 4 259 -3 224 321 113 0 chr5 96024504 96024610 -103605540 + MIR3 SINE MIR 86 203 -5 229 241 102 56 chr5 96025086 96025194 -103604956 + MIR SINE MIR 2 114 -148 3760 183 19 8 chr5 96025245 96025988 -103604162 - L1MB8 LINE L1 -9 6169 5419 417 153 0 0 chr5 96025992 96026064 -103604086 - L1MB8 LINE L1 -903 5243 5172 209 220 0 34 chr5 96026074 96026133 -103604017 + MIR SINE MIR 134 190 -72 24 32 0 0 chr5 96026425 96026456 -103603694 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr5 96027781 96027818 -103602332 + AT_rich Low_complexity Low_complexity 1 37 0 189 0 0 0 chr5 96028039 96028060 -103602090 + (CAAT)n Simple_repeat Simple_repeat 2 22 0 2020 108 0 36 chr5 96030270 96030577 -103599573 - AluSx SINE Alu -13 299 4 412 266 43 53 chr5 96031547 96031829 -103598321 + L1ME4a LINE L1 5691 5969 -152 2465 160 12 2 chr5 96033081 96033500 -103596650 - L1PB4 LINE L1 -139 6017 5595 221 250 0 0 chr5 96033502 96033546 -103596604 + polypyrimidine Low_complexity Low_complexity 3 46 0 2524 43 0 0 chr5 96033637 96033936 -103596214 + AluY SINE Alu 7 305 -6 7521 123 26 9 chr5 96034618 96035829 -103594321 - Tigger3b DNA MER2_type 0 1231 1 205 232 36 0 chr5 96035926 96035982 -103594168 + CT-rich Low_complexity Low_complexity 2 59 0 193 271 21 0 chr5 96037245 96037293 -103592857 - L2 LINE L2 -10 3303 3255 417 227 204 28 chr5 96043077 96043253 -103586897 - MIR SINE MIR 0 262 56 2429 56 13 0 chr5 96043506 96043810 -103586340 - AluY SINE Alu -3 308 1 340 204 0 19 chr5 96043910 96044013 -103586137 + CT-rich Low_complexity Low_complexity 4 104 0 25 0 0 0 chr5 96045002 96045027 -103585123 + AT_rich Low_complexity Low_complexity 1 25 0 2596 251 33 35 chr5 96045118 96045963 -103584187 + L1ME1 LINE L1 5287 6115 -51 23 54 0 0 chr5 96046364 96046401 -103583749 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 96046687 96046708 -103583442 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 96046734 96046755 -103583395 + AT_rich Low_complexity Low_complexity 1 21 0 6988 129 4 6 chr5 96047373 96048789 -103581361 - L1MA2 LINE L1 0 6304 4890 217 284 54 14 chr5 96049581 96049655 -103580495 + L2 LINE L2 3237 3313 0 263 332 2 0 chr5 96049990 96050085 -103580065 + MIR SINE MIR 68 162 -59 576 329 54 42 chr5 96050371 96050947 -103579203 + L2 LINE L2 2690 3272 0 1238 251 62 72 chr5 96051039 96051594 -103578556 + L2 LINE L2 2765 3312 -1 26 0 0 0 chr5 96052249 96052275 -103577875 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 96053605 96053626 -103576524 + AT_rich Low_complexity Low_complexity 1 21 0 407 333 87 7 chr5 96053756 96053906 -103576244 + L2 LINE L2 3108 3269 -3 574 346 44 9 chr5 96054022 96054250 -103575900 + MIR SINE MIR 12 247 -15 1951 141 22 73 chr5 96054555 96054966 -103575184 + MLT1B LTR MaLR 1 390 0 403 317 175 11 chr5 96055071 96055443 -103574707 + MARNA DNA Mariner 8 440 -146 761 261 39 13 chr5 96055896 96056126 -103574024 + MIR SINE MIR 17 252 -10 318 289 123 0 chr5 96057967 96058081 -103572069 - L2 LINE L2 -5 3267 3140 655 262 35 25 chr5 96058126 96058328 -103571822 - MIR SINE MIR 0 262 59 892 101 0 0 chr5 96059501 96059620 -103570530 + AluSc SINE Alu 168 286 -23 193 29 59 0 chr5 96059623 96059657 -103570493 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 2074 108 0 0 chr5 96060408 96060725 -103569425 + AluSc SINE Alu 1 317 0 343 298 157 21 chr5 96062155 96062346 -103567804 + MIR SINE MIR 46 262 0 242 224 141 0 chr5 96063110 96063195 -103566955 + MIR SINE MIR 65 161 -101 248 178 0 0 chr5 96063242 96063287 -103566863 - MER63 DNA MER1_type -38 1023 979 492 219 0 10 chr5 96063287 96063383 -103566767 - MER63 DNA MER1_type -83 753 33 1838 128 46 0 chr5 96064316 96064658 -103565492 + AluSq SINE Alu 1 355 0 30 0 0 0 chr5 96064848 96064878 -103565272 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr5 96065016 96065045 -103565105 + AT_rich Low_complexity Low_complexity 1 29 0 225 305 59 47 chr5 96065118 96065374 -103564776 - L1MC/D LINE L1 -1918 5890 5632 342 363 20 0 chr5 96065424 96065570 -103564580 - MIR SINE MIR -113 149 1 1050 327 50 16 chr5 96065602 96066045 -103564105 + HsTC2a DNA Tc2 31 488 -256 1735 187 45 0 chr5 96066048 96066380 -103563770 - MLT1A1 LTR MaLR 0 365 19 661 227 61 9 chr5 96066394 96066623 -103563527 + HsTC2a DNA Tc2 496 736 -6 263 263 179 11 chr5 96066623 96066718 -103563432 + MIR SINE MIR 150 260 -2 1741 211 9 3 chr5 96067070 96067412 -103562738 + MER2 DNA MER2_type 1 344 0 185 132 26 0 chr5 96069232 96069270 -103560880 + (TG)n Simple_repeat Simple_repeat 2 40 0 452 315 49 12 chr5 96069714 96069876 -103560274 + MIR3 SINE MIR 7 174 -34 1163 235 75 25 chr5 96070364 96070683 -103559467 - MLT1C LTR MaLR 0 467 133 290 276 81 41 chr5 96072091 96072214 -103557936 + L2 LINE L2 3186 3313 0 2373 70 0 10 chr5 96073201 96073515 -103556635 - AluY SINE Alu 0 311 1 1395 22 6 11 chr5 96073620 96073801 -103556349 + (TTC)n Simple_repeat Simple_repeat 1 180 0 215 130 0 43 chr5 96073801 96073847 -103556303 + (TTCTCC)n Simple_repeat Simple_repeat 2 45 0 1935 124 3 33 chr5 96073847 96074154 -103555996 - AluSc SINE Alu -11 298 1 242 171 24 0 chr5 96075521 96075562 -103554588 + HAL1b LINE L1 338 379 -952 180 239 42 56 chr5 96077262 96077333 -103552817 + L2 LINE L2 3016 3085 -187 397 263 223 17 chr5 96079449 96079624 -103550526 - MIR SINE MIR -29 233 23 863 298 4 27 chr5 96079677 96079939 -103550211 + MER102a DNA MER1_type 75 330 0 740 298 95 31 chr5 96080160 96080874 -103549276 + HAL1b LINE L1 427 685 -646 301 321 112 32 chr5 96081305 96081492 -103548658 - MIR3 SINE MIR -4 204 3 7914 188 36 13 chr5 96084815 96086441 -103543709 - L1MC3 LINE L1 -7 7778 6116 658 199 34 20 chr5 96086442 96086588 -103543562 - L1MC3 LINE L1 -1748 6037 5890 515 274 51 66 chr5 96086708 96086905 -103543245 - MLT1D LTR MaLR -309 196 3 4399 228 84 26 chr5 96086907 96088502 -103541648 - L1MCa LINE L1 -2424 4140 2328 2434 64 0 13 chr5 96088502 96088814 -103541336 - AluY SINE Alu -2 309 2 4399 228 84 26 chr5 96088814 96089287 -103540863 - L1MCa LINE L1 -4236 2328 1884 1006 136 0 0 chr5 96089288 96089435 -103540715 - AluSx SINE Alu -12 300 154 533 108 0 0 chr5 96089435 96089509 -103540641 - AluSx SINE Alu -239 74 1 1133 175 24 16 chr5 96089515 96089767 -103540383 - L1MCa LINE L1 -4767 1797 1544 2570 267 47 44 chr5 96089768 96091305 -103538845 - L1MCa LINE L1 -4849 1196 5 195 346 83 49 chr5 96091510 96091834 -103538316 - L2 LINE L2 -74 3198 2864 22 35 0 0 chr5 96093202 96093231 -103536919 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 96095834 96095862 -103534288 + AT_rich Low_complexity Low_complexity 1 28 0 30 83 0 0 chr5 96097973 96098045 -103532105 + AT_rich Low_complexity Low_complexity 1 72 0 23 33 0 0 chr5 96098172 96098202 -103531948 + AT_rich Low_complexity Low_complexity 1 30 0 675 236 74 30 chr5 96098755 96098958 -103531192 - MER58C DNA MER1_type -2 213 2 2211 97 10 0 chr5 96100539 96100837 -103529313 + AluSp SINE Alu 1 301 -12 241 382 56 0 chr5 96101449 96101538 -103528612 + L2 LINE L2 3189 3282 -31 2262 106 0 0 chr5 96101902 96102194 -103527956 + AluSx SINE Alu 1 292 -20 2802 106 36 5 chr5 96102274 96102689 -103527461 + MSTA LTR MaLR 1 428 0 221 320 13 27 chr5 96103593 96103668 -103526482 - MIR SINE MIR -90 118 45 207 239 261 11 chr5 96105822 96105914 -103524236 - MER5A DNA MER1_type -2 187 73 325 295 39 52 chr5 96106310 96106528 -103523622 - L1MC/D LINE L1 -732 5430 5255 504 276 102 58 chr5 96107053 96107485 -103522665 - MLT1H LTR MaLR 0 549 86 2399 61 3 0 chr5 96107485 96107782 -103522368 - AluY SINE Alu -13 298 1 504 276 102 58 chr5 96107782 96107872 -103522278 - MLT1H LTR MaLR -463 86 1 670 318 134 13 chr5 96108013 96108413 -103521737 + L2 LINE L2 2591 3041 -272 1935 143 0 19 chr5 96108413 96108721 -103521429 - MER1B DNA MER1_type 0 339 38 319 228 121 67 chr5 96109993 96110142 -103520008 - MIR SINE MIR 0 262 106 288 127 0 0 chr5 96111103 96111158 -103518992 + (CA)n Simple_repeat Simple_repeat 1 55 0 428 320 39 55 chr5 96112332 96112525 -103517625 + MIR SINE MIR 2 192 -70 1888 153 42 31 chr5 96112525 96112885 -103517265 + THE1B LTR MaLR 1 364 0 428 320 39 55 chr5 96112885 96112947 -103517203 + MIR SINE MIR 192 253 -9 355 359 16 27 chr5 96113291 96113475 -103516675 + MIR SINE MIR 6 187 -75 25 0 0 0 chr5 96114065 96114090 -103516060 + AT_rich Low_complexity Low_complexity 1 25 0 314 314 133 34 chr5 96115585 96116033 -103514117 - L2 LINE L2 -247 3066 2575 1027 139 36 0 chr5 96116104 96116298 -103513852 + L1MA7 LINE L1 6091 6291 0 240 319 146 32 chr5 96116638 96116823 -103513327 + MIR SINE MIR 57 262 0 272 336 37 19 chr5 96117190 96117297 -103512853 - MLT1K LTR MaLR -210 378 270 468 176 235 0 chr5 96117359 96117495 -103512655 + MER105 DNA DNA 36 203 -1 193 413 28 28 chr5 96118844 96119062 -103511088 + L2 LINE L2 2150 2367 -947 1427 263 195 17 chr5 96119118 96119809 -103510341 + L2 LINE L2 1721 2534 -780 696 223 0 0 chr5 96119809 96119930 -103510220 - MER45A DNA AcHobo 0 178 58 837 250 45 5 chr5 96119982 96120206 -103509944 + L2 LINE L2 2545 2777 -537 292 259 148 19 chr5 96120509 96120617 -103509533 + MLT1A1 LTR MaLR 166 287 -78 432 141 14 0 chr5 96120708 96120779 -103509371 + L1MA4A LINE L1 4 75 -6774 15391 181 35 10 chr5 96120834 96123825 -103506325 + L1MA4A LINE L1 325 3241 -3764 1737 171 123 28 chr5 96123825 96124216 -103505934 + MSTA LTR MaLR 1 428 0 15391 181 35 10 chr5 96124216 96127740 -103502410 + L1MA4A LINE L1 3241 6999 -6 1814 155 13 3 chr5 96127961 96128264 -103501886 - AluSx SINE Alu -6 306 1 580 332 85 0 chr5 96128579 96128802 -103501348 - MIR SINE MIR 0 262 21 183 42 0 0 chr5 96130657 96130681 -103499469 + (TA)n Simple_repeat Simple_repeat 2 25 0 410 329 26 13 chr5 96130696 96130851 -103499299 + MIR3 SINE MIR 47 203 -5 26 0 0 0 chr5 96131067 96131093 -103499057 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr5 96131351 96131383 -103498767 + AT_rich Low_complexity Low_complexity 1 32 0 36 40 0 0 chr5 96132179 96132229 -103497921 + AT_rich Low_complexity Low_complexity 1 50 0 392 259 95 34 chr5 96132272 96132419 -103497731 - MIR SINE MIR 0 262 107 1476 124 4 17 chr5 96132902 96133135 -103497015 + AluSq SINE Alu 1 230 -83 382 283 79 40 chr5 96133377 96133681 -103496469 + L1ME4a LINE L1 5654 5969 -152 21 0 0 0 chr5 96133895 96133916 -103496234 + AT_rich Low_complexity Low_complexity 1 21 0 449 323 101 33 chr5 96134147 96134423 -103495727 + MER102b DNA MER1_type 1 295 -46 21 0 0 0 chr5 96135868 96135889 -103494261 + AT_rich Low_complexity Low_complexity 1 21 0 297 339 78 0 chr5 96136579 96136694 -103493456 - L2 LINE L2 0 3272 3149 3152 38 3 5 chr5 96136886 96137278 -103492872 - L1PA4 LINE L1 -3 6152 5762 335 247 97 0 chr5 96138439 96138532 -103491618 + MIR SINE MIR 103 204 -58 246 176 0 0 chr5 96138548 96138599 -103491551 + (ATG)n Simple_repeat Simple_repeat 3 53 0 300 361 104 48 chr5 96138829 96139164 -103490986 + L2 LINE L2 2916 3269 -3 21 0 0 0 chr5 96139316 96139337 -103490813 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 96139393 96139422 -103490728 + AT_rich Low_complexity Low_complexity 1 29 0 1292 119 40 22 chr5 96139754 96139980 -103490170 - MER65A LTR ERV1 -104 341 112 210 120 40 40 chr5 96141220 96141270 -103488880 + A-rich Low_complexity Low_complexity 3 52 0 390 0 83 0 chr5 96141366 96141426 -103488724 + CT-rich Low_complexity Low_complexity 4 68 0 284 230 24 24 chr5 96141598 96141693 -103488457 - MIR3 SINE MIR -9 199 104 453 66 0 0 chr5 96142364 96142425 -103487725 + (CA)n Simple_repeat Simple_repeat 2 62 0 1633 226 84 31 chr5 96143586 96144064 -103486086 - MLT1D LTR MaLR 0 505 3 1187 319 98 50 chr5 96144449 96144577 -103485573 + L2 LINE L2 2205 2325 -988 2489 215 81 14 chr5 96144577 96145144 -103485006 - MER77 LTR ERV1 0 605 1 1187 319 98 50 chr5 96145144 96146066 -103484084 + L2 LINE L2 2325 3313 0 189 0 0 0 chr5 96147116 96147137 -103483013 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 25 31 0 0 chr5 96149127 96149159 -103480991 + AT_rich Low_complexity Low_complexity 1 32 0 199 250 0 0 chr5 96149190 96149234 -103480916 + MIR SINE MIR 216 259 -3 870 331 70 17 chr5 96149339 96149813 -103480337 + L3 LINE CR1 867 1365 -212 206 254 0 99 chr5 96151193 96151264 -103478886 - L2 LINE L2 -8 3305 3242 464 297 47 0 chr5 96151373 96151501 -103478649 + L2 LINE L2 3139 3272 0 26 0 0 0 chr5 96152957 96152983 -103477167 + AT_rich Low_complexity Low_complexity 1 26 0 1952 123 0 4 chr5 96152995 96153264 -103476886 - AluSg SINE Alu -15 295 28 234 0 0 0 chr5 96204263 96204289 -103425861 + (TG)n Simple_repeat Simple_repeat 1 26 0 276 281 215 15 chr5 96204289 96204424 -103425726 + MIR3 SINE MIR 32 193 -15 246 311 76 25 chr5 96204466 96204585 -103425565 + MIR SINE MIR 4 128 -134 230 245 0 0 chr5 96206160 96206209 -103423941 + CT-rich Low_complexity Low_complexity 2 50 0 40 49 0 0 chr5 96206503 96206564 -103423586 + AT_rich Low_complexity Low_complexity 1 61 0 213 235 0 0 chr5 96207967 96208018 -103422132 + A-rich Low_complexity Low_complexity 1 51 0 324 0 0 0 chr5 96208090 96208126 -103422024 + (CA)n Simple_repeat Simple_repeat 2 37 0 222 91 0 0 chr5 96210470 96210503 -103419647 + (TG)n Simple_repeat Simple_repeat 1 33 0 319 254 53 53 chr5 96211430 96211481 -103418669 + MIR SINE MIR 57 107 -155 1932 157 0 7 chr5 96211481 96211780 -103418370 - AluSx SINE Alu -15 297 1 319 254 53 53 chr5 96211780 96211842 -103418308 + MIR SINE MIR 106 170 -92 395 314 46 7 chr5 96211902 96212055 -103418095 - LTR33 LTR ERVL -352 169 11 192 440 38 6 chr5 96212148 96212305 -103417845 - L2 LINE L2 -276 3037 2876 199 183 267 0 chr5 96212351 96212411 -103417739 - L2 LINE L2 -574 2740 2665 189 387 0 0 chr5 96212530 96212592 -103417558 - MIR SINE MIR -156 106 45 27 0 0 0 chr5 96213886 96213913 -103416237 + AT_rich Low_complexity Low_complexity 1 27 0 34 72 0 0 chr5 96214106 96214175 -103415975 + AT_rich Low_complexity Low_complexity 1 69 0 25 65 0 0 chr5 96215549 96215595 -103414555 + AT_rich Low_complexity Low_complexity 1 46 0 1279 117 10 15 chr5 96218042 96218248 -103411902 + AluSg SINE Alu 28 232 -78 191 147 0 29 chr5 96218659 96218693 -103411457 - L2 LINE L2 -100 3213 3181 857 332 70 17 chr5 96219294 96219776 -103410374 - L3 LINE CR1 -212 1365 858 197 250 0 0 chr5 96219873 96219917 -103410233 - MIR SINE MIR -3 259 216 25 31 0 0 chr5 96219948 96219980 -103410170 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr5 96221659 96221680 -103408470 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1228 318 103 48 chr5 96222730 96223652 -103406498 - L2 LINE L2 0 3313 2315 2471 215 81 14 chr5 96223652 96224219 -103405931 + MER77 LTR ERV1 1 605 0 1228 318 103 48 chr5 96224219 96224372 -103405778 - L2 LINE L2 -998 2315 2172 1227 355 35 64 chr5 96224732 96225250 -103404900 + MLT1D LTR MaLR 3 505 0 453 66 0 0 chr5 96226411 96226472 -103403678 + (TG)n Simple_repeat Simple_repeat 2 62 0 1292 119 40 22 chr5 96227329 96227555 -103402595 + MER65A LTR ERV1 112 341 -104 22 35 0 0 chr5 96227887 96227916 -103402234 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 96227972 96227993 -103402157 + AT_rich Low_complexity Low_complexity 1 21 0 300 361 104 48 chr5 96228145 96228480 -103401670 - L2 LINE L2 -3 3269 2916 246 176 0 0 chr5 96228711 96228762 -103401388 + (CAT)n Simple_repeat Simple_repeat 3 53 0 335 247 97 0 chr5 96228778 96228871 -103401279 - MIR SINE MIR -58 204 103 3173 36 3 5 chr5 96229904 96230296 -103399854 + L1PA4 LINE L1 5762 6152 -3 297 339 78 0 chr5 96230488 96230603 -103399547 + L2 LINE L2 3149 3272 0 21 0 0 0 chr5 96231293 96231314 -103398836 + AT_rich Low_complexity Low_complexity 1 21 0 449 323 101 33 chr5 96232758 96233034 -103397116 - MER102b DNA MER1_type -46 295 1 21 0 0 0 chr5 96233265 96233286 -103396864 + AT_rich Low_complexity Low_complexity 1 21 0 382 283 79 40 chr5 96233500 96233804 -103396346 - L1ME4a LINE L1 -152 5969 5654 1476 124 4 17 chr5 96234046 96234279 -103395871 - AluSq SINE Alu -83 230 1 392 259 95 34 chr5 96234762 96234909 -103395241 + MIR SINE MIR 107 262 0 36 40 0 0 chr5 96234952 96235002 -103395148 + AT_rich Low_complexity Low_complexity 1 50 0 25 31 0 0 chr5 96235798 96235830 -103394320 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr5 96236088 96236114 -103394036 + AT_rich Low_complexity Low_complexity 1 26 0 410 329 26 13 chr5 96236330 96236485 -103393665 - MIR3 SINE MIR -5 203 47 183 42 0 0 chr5 96236500 96236524 -103393626 + (TA)n Simple_repeat Simple_repeat 2 25 0 580 332 85 0 chr5 96238379 96238602 -103391548 + MIR SINE MIR 21 262 0 1814 155 13 3 chr5 96238917 96239220 -103390930 + AluSx SINE Alu 1 306 -6 5673 156 35 15 chr5 96239441 96241259 -103388891 - L1MA4A LINE L1 -6 6999 5146 12980 193 34 12 chr5 96241363 96242791 -103387359 - L1MA4A LINE L1 -1981 4867 3471 1737 171 123 28 chr5 96242791 96243182 -103386968 - MSTA LTR MaLR 0 428 1 12980 193 34 12 chr5 96243182 96246179 -103383971 - L1MA4A LINE L1 -3377 3471 325 432 141 14 0 chr5 96246234 96246305 -103383845 - L1MA4A LINE L1 -6774 75 4 292 259 148 19 chr5 96246396 96246504 -103383646 - MLT1A1 LTR MaLR -78 287 166 837 250 45 5 chr5 96246807 96247031 -103383119 - L2 LINE L2 -537 2777 2545 696 223 0 0 chr5 96247083 96247204 -103382946 + MER45A DNA AcHobo 58 178 0 1427 263 195 17 chr5 96247204 96247895 -103382255 - L2 LINE L2 -780 2534 1721 193 413 28 28 chr5 96247951 96248169 -103381981 - L2 LINE L2 -947 2367 2150 455 178 244 0 chr5 96249517 96249652 -103380498 - MER105 DNA DNA -1 203 36 272 336 37 19 chr5 96249713 96249820 -103380330 + MLT1K LTR MaLR 270 378 -210 240 319 146 32 chr5 96250186 96250371 -103379779 - MIR SINE MIR 0 262 57 1027 139 36 0 chr5 96250712 96250906 -103379244 - L1MA7 LINE L1 0 6291 6091 25 0 0 0 chr5 96252624 96252649 -103377501 + AT_rich Low_complexity Low_complexity 1 25 0 355 359 16 27 chr5 96253240 96253424 -103376726 - MIR SINE MIR -75 187 6 397 314 39 62 chr5 96253767 96253829 -103376321 - MIR SINE MIR -9 253 191 1888 153 42 31 chr5 96253829 96254189 -103375961 - THE1B LTR MaLR 0 364 1 397 314 39 62 chr5 96254189 96254384 -103375766 - MIR SINE MIR -71 191 2 288 127 0 0 chr5 96255558 96255613 -103374537 + (TG)n Simple_repeat Simple_repeat 1 55 0 319 228 121 67 chr5 96256574 96256723 -103373427 + MIR SINE MIR 106 262 0 1935 143 0 19 chr5 96257993 96258301 -103371849 + MER1B DNA MER1_type 38 339 0 670 318 134 13 chr5 96258301 96258701 -103371449 - L2 LINE L2 -272 3041 2591 521 275 102 58 chr5 96258842 96258932 -103371218 + MLT1H LTR MaLR 1 86 -463 2399 61 3 0 chr5 96258932 96259229 -103370921 + AluY SINE Alu 1 298 -13 521 275 102 58 chr5 96259229 96259661 -103370489 + MLT1H LTR MaLR 86 549 0 325 295 39 52 chr5 96260186 96260404 -103369746 + L1ME LINE L1 5255 5430 -732 207 239 261 11 chr5 96260800 96260892 -103369258 + MER5A DNA MER1_type 73 187 -2 221 320 13 27 chr5 96263043 96263118 -103367032 + MIR SINE MIR 45 118 -90 2802 106 36 5 chr5 96264022 96264437 -103365713 - MSTA LTR MaLR 0 428 1 2249 110 0 0 chr5 96264517 96264809 -103365341 - AluSx SINE Alu -20 292 1 241 382 56 0 chr5 96265173 96265262 -103364888 - L2 LINE L2 -31 3282 3189 2211 97 10 0 chr5 96265874 96266172 -103363978 - AluSp SINE Alu -12 301 1 675 236 74 30 chr5 96267752 96267955 -103362195 + MER58C DNA MER1_type 2 213 -2 21 36 0 0 chr5 96269812 96269840 -103360310 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 96272286 96272315 -103357835 + AT_rich Low_complexity Low_complexity 1 29 0 195 346 83 49 chr5 96273682 96274006 -103356144 + L2 LINE L2 2864 3198 -74 2570 267 51 45 chr5 96274211 96275748 -103354402 + L1MCa LINE L1 5 1500 -4849 1133 175 24 16 chr5 96275749 96276001 -103354149 + L1MCa LINE L1 1544 1797 -4767 994 131 0 4 chr5 96276007 96276228 -103353922 + AluSx SINE Alu 1 300 -12 4387 254 56 42 chr5 96276229 96276702 -103353448 + L1MCa LINE L1 1884 2349 -4215 2434 64 0 13 chr5 96276702 96277014 -103353136 + AluY SINE Alu 2 309 -2 4387 254 56 42 chr5 96277014 96278608 -103351542 + L1MCa LINE L1 2349 4140 -2424 515 274 51 66 chr5 96278610 96278807 -103351343 + MLT1D LTR MaLR 3 196 -309 628 197 34 27 chr5 96278928 96279075 -103351075 + L1MC3 LINE L1 5890 6037 -1748 7944 186 36 13 chr5 96279076 96280702 -103349448 + L1MC3 LINE L1 6116 7778 -7 301 321 112 32 chr5 96284145 96284332 -103345818 + MIR3 SINE MIR 3 204 -4 740 290 81 28 chr5 96284763 96285477 -103344673 - L1MEd LINE L1 -646 1687 444 863 298 4 27 chr5 96285698 96285960 -103344190 - MER102b DNA MER1_type 0 341 86 397 263 223 17 chr5 96286013 96286188 -103343962 + MIR SINE MIR 23 233 -29 180 239 42 56 chr5 96288304 96288375 -103341775 - L2 LINE L2 -187 3085 3016 318 50 0 0 chr5 96289561 96289601 -103340549 + (GAA)n Simple_repeat Simple_repeat 3 42 0 2351 76 0 10 chr5 96289706 96290020 -103340130 + AluY SINE Alu 1 311 0 290 276 81 41 chr5 96291007 96291130 -103339020 - L2 LINE L2 0 3313 3186 1163 235 75 25 chr5 96292564 96292883 -103337267 + MLT1C LTR MaLR 133 467 0 452 315 49 12 chr5 96293371 96293533 -103336617 - MIR3 SINE MIR -34 174 7 255 206 14 27 chr5 96293952 96294025 -103336125 + (CATA)n Simple_repeat Simple_repeat 4 75 0 1741 211 9 3 chr5 96295249 96295591 -103334559 - MER2 DNA MER2_type 0 344 1 263 263 179 11 chr5 96295943 96296038 -103334112 - MIR SINE MIR -2 260 150 661 227 61 9 chr5 96296038 96296267 -103333883 - HsTC2 DNA Tc2 -6 1892 1652 1735 187 45 0 chr5 96296281 96296613 -103333537 + MLT1A1 LTR MaLR 19 365 0 563 321 61 32 chr5 96296616 96296927 -103333223 - HsTC2 DNA Tc2 -254 1644 1149 492 219 0 10 chr5 96297761 96297857 -103332293 + MER63 DNA MER1_type 33 753 -309 248 178 0 0 chr5 96297857 96297902 -103332248 + MER63 DNA MER1_type 980 1024 -38 242 224 141 0 chr5 96297949 96298034 -103332116 - MIR SINE MIR -101 161 65 343 298 157 21 chr5 96298799 96298990 -103331160 - MIR SINE MIR 0 262 46 193 29 59 0 chr5 96300415 96300449 -103329701 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 892 101 0 0 chr5 96300452 96300571 -103329579 - AluSc SINE Alu -23 286 168 655 262 35 25 chr5 96301646 96301848 -103328302 + MIR SINE MIR 59 262 0 318 289 123 0 chr5 96301893 96302007 -103328143 + L2 LINE L2 3140 3267 -5 761 261 39 13 chr5 96303872 96304102 -103326048 - MIR SINE MIR -10 252 17 379 300 173 11 chr5 96304555 96304832 -103325318 - MARNA DNA Mariner -146 440 119 1522 150 24 88 chr5 96305041 96305382 -103324768 - MLT1B LTR MaLR -71 319 1 574 346 44 9 chr5 96305687 96305915 -103324235 - MIR SINE MIR -15 247 12 407 333 87 7 chr5 96306031 96306181 -103323969 - L2 LINE L2 -3 3269 3108 21 0 0 0 chr5 96306311 96306332 -103323818 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 96307662 96307688 -103322462 + AT_rich Low_complexity Low_complexity 1 26 0 1238 251 62 72 chr5 96308343 96308898 -103321252 - L2 LINE L2 -1 3312 2765 576 329 54 42 chr5 96308990 96309566 -103320584 - L2 LINE L2 0 3272 2690 263 332 2 0 chr5 96309852 96309947 -103320203 - MIR SINE MIR -59 149 68 217 284 54 14 chr5 96310282 96310356 -103319794 - L2 LINE L2 0 3313 3237 6984 129 4 5 chr5 96311225 96312640 -103317510 + L1MA2 LINE L1 4890 6304 0 340 204 0 19 chr5 96313871 96313974 -103316176 + GA-rich Low_complexity Low_complexity 4 104 0 2429 56 13 0 chr5 96314074 96314378 -103315772 + AluY SINE Alu 1 308 -3 417 227 204 28 chr5 96314631 96314807 -103315343 + MIR SINE MIR 56 262 0 193 271 21 0 chr5 96320592 96320640 -103309510 + L2 LINE L2 3255 3303 -10 21 0 0 0 chr5 96321804 96321825 -103308325 + AT_rich Low_complexity Low_complexity 1 21 0 7537 122 26 9 chr5 96322057 96323268 -103306882 + Tigger3b DNA MER2_type 1 1231 0 2528 47 0 0 chr5 96323951 96324252 -103305898 - AluY SINE Alu -4 307 7 221 250 0 0 chr5 96324343 96324387 -103305763 + polypurine Low_complexity Low_complexity 3 46 0 968 169 6 6 chr5 96324389 96324566 -103305584 + L1P5 LINE L1 5595 5771 -385 466 266 43 53 chr5 96325935 96326217 -103303933 - L1MC4a LINE L1 -152 5969 5689 2032 104 0 36 chr5 96327190 96327497 -103302653 + AluSx SINE Alu 4 299 -13 189 0 0 0 chr5 96329752 96329773 -103300377 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 21 57 0 0 chr5 96329994 96330029 -103300121 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 96331353 96331384 -103298766 + AT_rich Low_complexity Low_complexity 1 31 0 375 256 66 16 chr5 96331567 96331688 -103298462 - MIR SINE MIR -2 260 134 417 153 0 0 chr5 96331698 96331770 -103298380 + L1MB8 LINE L1 5172 5243 -903 3762 178 21 11 chr5 96331774 96332517 -103297633 + L1MB8 LINE L1 5419 6169 -9 232 278 83 37 chr5 96332568 96332676 -103297474 - MIR SINE MIR -148 114 2 239 311 113 0 chr5 96333152 96333258 -103296892 - MIR3 SINE MIR -5 203 86 584 313 112 13 chr5 96333319 96333552 -103296598 - MIR SINE MIR -3 259 4 27 0 0 0 chr5 96333582 96333609 -103296541 + AT_rich Low_complexity Low_complexity 1 27 0 43 76 0 0 chr5 96333688 96333780 -103296370 + AT_rich Low_complexity Low_complexity 1 92 0 860 257 119 10 chr5 96334536 96334839 -103295311 + MER46C DNA MER2_type 1 336 -2 216 214 0 0 chr5 96334889 96334931 -103295219 + (TA)n Simple_repeat Simple_repeat 1 42 0 329 307 66 5 chr5 96335032 96335244 -103294906 + L1ME4a LINE L1 5726 5950 -171 243 182 202 61 chr5 96336465 96336564 -103293586 - MIR SINE MIR -1 261 149 379 264 145 43 chr5 96336567 96336802 -103293348 + L2 LINE L2 3045 3303 -10 229 242 145 89 chr5 96336787 96336911 -103293239 - MIR SINE MIR -100 162 32 * 1926 191 46 68 chr5 96337617 96337684 -103292466 + MLT2B1 LTR ERVL 1 68 -452 2130 117 79 15 chr5 96337684 96338026 -103292124 - THE1B LTR MaLR 0 364 1 1926 191 46 68 chr5 96338026 96338454 -103291696 + MLT2B1 LTR ERVL 68 485 -35 282 88 18 0 chr5 96338490 96338540 -103291610 + MLT2B3 LTR ERVL 390 552 -2 203 407 29 26 chr5 96338711 96338984 -103291166 - L2 LINE L2 -943 2371 2098 232 333 51 25 chr5 96440472 96440709 -103189441 + L2 LINE L2 1933 2175 -1139 1756 178 7 19 chr5 96441306 96441615 -103188535 - AluJo SINE Alu -6 306 2 2172 104 3 3 chr5 96441629 96441916 -103188234 - AluSg SINE Alu -23 287 1 237 333 116 48 chr5 96441928 96442075 -103188075 + L2 LINE L2 3116 3272 0 237 65 0 0 chr5 96442440 96442471 -103187679 + (CA)n Simple_repeat Simple_repeat 2 32 0 182 241 69 17 chr5 96443437 96443495 -103186655 - MIR SINE MIR -3 259 199 1181 209 110 52 chr5 96443496 96443841 -103186309 - MLT1A1 LTR MaLR 0 365 1 281 247 0 34 chr5 96443874 96443963 -103186187 + L2 LINE L2 3189 3274 -39 303 256 64 8 chr5 96444090 96444215 -103185935 + MIR SINE MIR 56 187 -75 915 266 53 36 chr5 96444222 96444675 -103185475 - MLT1G1 LTR MaLR -19 576 70 2374 106 48 31 chr5 96444675 96445033 -103185117 + THE1B LTR MaLR 1 364 0 915 266 53 36 chr5 96445033 96445105 -103185045 - MLT1G1 LTR MaLR -525 70 1 685 185 31 0 chr5 96447192 96447322 -103182828 + MER94 DNA DNA 1 134 0 23 0 0 0 chr5 96449631 96449654 -103180496 + AT_rich Low_complexity Low_complexity 1 23 0 730 23 0 0 chr5 96452525 96452613 -103177537 - L1PA7 LINE L1 0 6154 6067 306 50 0 0 chr5 96453531 96453571 -103176579 + (CA)n Simple_repeat Simple_repeat 2 41 0 2882 9 0 0 chr5 96454492 96454807 -103175343 - AluYb8 SINE Alu -3 315 1 22 35 0 0 chr5 96454829 96454858 -103175292 + AT_rich Low_complexity Low_complexity 1 29 0 902 134 23 41 chr5 96455329 96455501 -103174649 + FRAM SINE Alu 1 169 -7 270 310 20 20 chr5 96458035 96458135 -103172015 - L2 LINE L2 0 3313 3214 2532 69 0 0 chr5 96458184 96458490 -103171660 - AluY SINE Alu -5 306 1 413 302 22 22 chr5 96458654 96458756 -103171394 - L3 LINE CR1 -348 1229 1125 2301 73 0 3 chr5 96458756 96459068 -103171082 - AluY SINE Alu 0 311 1 413 302 22 22 chr5 96459068 96459144 -103171006 - L3 LINE CR1 -451 1126 1051 291 202 221 87 chr5 96459625 96459749 -103170401 + MIR SINE MIR 23 129 -133 231 36 0 0 chr5 96459749 96459777 -103170373 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 4155 48 2 6 chr5 96459777 96460293 -103169857 - L1PA5 LINE L1 -16 6138 5625 291 202 221 87 chr5 96460293 96460375 -103169775 + MIR SINE MIR 128 258 -4 292 226 66 38 chr5 96461069 96461175 -103168975 - MIR3 SINE MIR -90 118 10 24 0 0 0 chr5 96462483 96462507 -103167643 + AT_rich Low_complexity Low_complexity 1 24 0 180 163 0 0 chr5 96462524 96462567 -103167583 + (TA)n Simple_repeat Simple_repeat 2 44 0 404 316 19 32 chr5 96463235 96463393 -103166757 + MIR SINE MIR 1 156 -106 481 255 150 0 chr5 96463393 96463546 -103166604 + MIR SINE MIR 53 228 -34 26 0 0 0 chr5 96463903 96463929 -103166221 + AT_rich Low_complexity Low_complexity 1 26 0 772 238 88 65 chr5 96464464 96464555 -103165595 + MLT1J LTR MaLR 135 222 -289 2569 30 0 10 chr5 96464555 96464859 -103165291 + AluY SINE Alu 1 301 -10 772 238 88 65 chr5 96464859 96465074 -103165076 + MLT1J LTR MaLR 222 448 -63 2372 70 0 0 chr5 96465832 96466130 -103164020 + AluY SINE Alu 1 298 -13 262 270 135 9 chr5 96466300 96466411 -103163739 - L2 LINE L2 -1 3312 3188 468 285 130 0 chr5 96467237 96467360 -103162790 + MIR SINE MIR 7 145 -117 2051 99 0 0 chr5 96467756 96468018 -103162132 - AluSg SINE Alu -9 301 40 30 69 0 0 chr5 96468340 96468398 -103161752 + AT_rich Low_complexity Low_complexity 1 58 0 261 0 0 0 chr5 96468501 96468530 -103161620 + (CA)n Simple_repeat Simple_repeat 2 30 0 1849 182 20 96 chr5 96468698 96469242 -103160908 + MLT1D LTR MaLR 3 505 0 26 0 0 0 chr5 96469856 96469882 -103160268 + AT_rich Low_complexity Low_complexity 1 26 0 207 0 0 0 chr5 96471872 96471895 -103158255 + (T)n Simple_repeat Simple_repeat 1 23 0 467 224 72 16 chr5 96472992 96473117 -103157033 - MLT1G LTR MaLR -1 554 423 674 286 33 47 chr5 96473117 96473393 -103156757 - MLT1G LTR MaLR -303 287 16 2276 88 0 42 chr5 96473464 96473772 -103156378 + AluSg SINE Alu 1 295 -15 198 103 0 0 chr5 96473988 96474017 -103156133 + (CTG)n Simple_repeat Simple_repeat 1 29 0 1474 207 85 32 chr5 96474588 96474998 -103155152 + L1MCc LINE L1 30 461 -5962 205 138 0 0 chr5 96475160 96475189 -103154961 + (GAA)n Simple_repeat Simple_repeat 2 30 0 2075 256 109 67 chr5 96475360 96477180 -103152970 + L1MCc LINE L1 655 2772 -4350 1677 156 120 33 chr5 96477560 96477919 -103152231 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr5 96478150 96478172 -103151978 + AT_rich Low_complexity Low_complexity 1 22 0 225 94 0 0 chr5 96478200 96478232 -103151918 + (T)n Simple_repeat Simple_repeat 1 32 0 1776 122 0 0 chr5 96478253 96478490 -103151660 - AluSx SINE Alu -75 237 1 189 315 0 0 chr5 96479162 96479216 -103150934 + MIR SINE MIR 154 207 -55 25 83 0 0 chr5 96479609 96479669 -103150481 + AT_rich Low_complexity Low_complexity 1 60 0 909 229 11 0 chr5 96480274 96480453 -103149697 + MER5A DNA MER1_type 4 184 -5 230 224 92 26 chr5 96480827 96480903 -103149247 + MIR SINE MIR 127 207 -55 1972 158 3 7 chr5 96481940 96482250 -103147900 - AluJb SINE Alu -3 309 1 1069 100 0 0 chr5 96482254 96482394 -103147756 - AluSg/x SINE Alu -3 306 167 1850 136 85 23 chr5 96482455 96482807 -103147343 - THE1C LTR MaLR -1 374 1 656 257 48 24 chr5 96483666 96483872 -103146278 + MIR SINE MIR 15 225 -37 26 50 0 0 chr5 96483879 96483919 -103146231 + AT_rich Low_complexity Low_complexity 1 40 0 349 315 24 17 chr5 96484505 96484665 -103145485 - MIR SINE MIR -46 162 2 268 365 160 10 chr5 96484969 96485257 -103144893 - L2 LINE L2 -562 2752 2422 23 54 0 0 chr5 96485887 96485924 -103144226 + AT_rich Low_complexity Low_complexity 1 37 0 214 312 110 0 chr5 96486006 96486115 -103144035 - L3 LINE CR1 -1 1576 1456 2495 74 0 0 chr5 96487485 96487796 -103142354 - AluY SINE Alu 0 311 1 189 0 0 0 chr5 96489816 96489837 -103140313 + (TAA)n Simple_repeat Simple_repeat 2 22 0 513 289 65 20 chr5 96490596 96490842 -103139308 + L1ME4a LINE L1 5678 5934 -187 37 0 0 0 chr5 96490845 96490882 -103139268 + AT_rich Low_complexity Low_complexity 1 37 0 287 220 53 33 chr5 96490954 96491104 -103139046 + L1ME4a LINE L1 5966 6118 -3 314 268 97 25 chr5 96491713 96491840 -103138310 + MIR SINE MIR 32 159 -49 204 317 173 10 chr5 96492816 96492920 -103137230 + MIR SINE MIR 7 127 -135 274 314 20 20 chr5 96493350 96493452 -103136698 - L3 LINE CR1 -111 1466 1365 3300 40 0 0 chr5 96494128 96494548 -103135602 - L1P LINE L1 -2306 3840 3421 6667 48 1 0 chr5 96494553 96495369 -103134781 + L1PA5 LINE L1 5337 6153 -1 2272 100 3 3 chr5 96495725 96496026 -103134124 - AluSx SINE Alu -11 301 1 326 215 122 28 chr5 96496225 96496332 -103133818 + MIR SINE MIR 72 188 -74 206 263 81 30 chr5 96496368 96496467 -103133683 - L2 LINE L2 -1084 2230 2127 405 254 56 78 chr5 96496714 96496856 -103133294 + MLT1J LTR MaLR 15 192 -293 2055 197 31 54 chr5 96497513 96497588 -103132562 + MLT1D LTR MaLR 1 76 -429 1685 198 22 32 chr5 96497588 96497957 -103132193 + MLT1A1 LTR MaLR 1 365 0 2055 197 31 54 chr5 96497957 96498398 -103131752 + MLT1D LTR MaLR 76 505 0 802 231 122 71 chr5 96499825 96500193 -103129957 - L1MCb LINE L1 -5708 337 1 2338 169 7 11 chr5 96500200 96500373 -103129777 - L1MA6 LINE L1 0 6300 6128 2001 144 42 3 chr5 96500373 96500707 -103129443 + MER7A DNA MER2_type 2 346 0 2338 169 7 11 chr5 96500707 96500971 -103129179 - L1MA6 LINE L1 -172 6128 5865 620 311 62 29 chr5 96501006 96501427 -103128723 - L1M4 LINE L1 -2373 3773 3339 22 56 0 0 chr5 96502168 96502204 -103127946 + AT_rich Low_complexity Low_complexity 1 36 0 210 261 43 58 chr5 96506995 96507064 -103123086 - L2 LINE L2 0 3272 3205 24 0 0 0 chr5 96507253 96507277 -103122873 + AT_rich Low_complexity Low_complexity 1 24 0 25 31 0 0 chr5 96508545 96508577 -103121573 + AT_rich Low_complexity Low_complexity 1 32 0 804 156 16 0 chr5 96511096 96511224 -103118926 + FLAM_A SINE Alu 1 130 -3 199 54 54 0 chr5 96512256 96512293 -103117857 + A-rich Low_complexity Low_complexity 2 40 0 24 0 0 0 chr5 96513867 96513891 -103116259 + AT_rich Low_complexity Low_complexity 1 24 0 670 334 91 49 chr5 96514319 96515232 -103114918 + L2 LINE L2 2007 2957 -357 359 295 49 16 chr5 96515649 96515771 -103114379 + L2 LINE L2 3184 3309 -4 247 250 23 23 chr5 96516999 96517087 -103113063 - L1MC4 LINE L1 0 8042 7955 788 218 37 37 chr5 96517119 96517335 -103112815 - LTR33 LTR ERVL -5 516 301 1733 177 26 3 chr5 96517395 96517690 -103112460 + L1MB2 LINE L1 5824 6129 -42 1995 151 30 48 chr5 96517690 96518087 -103112063 + MLT1B LTR MaLR 1 390 0 1733 177 26 3 chr5 96518087 96518130 -103112020 + L1MB2 LINE L1 6129 6170 -1 213 241 121 0 chr5 96518531 96518589 -103111561 - MIR SINE MIR -108 154 90 1475 171 4 11 chr5 96518923 96519197 -103110953 - L1PA16 LINE L1 0 6166 5895 30 45 0 0 chr5 96519271 96519315 -103110835 + AT_rich Low_complexity Low_complexity 1 44 0 1171 236 53 92 chr5 96519343 96519703 -103110447 - MLT2B1 LTR ERVL -68 346 1 1026 210 71 24 chr5 96519748 96520211 -103109939 - L1MC1 LINE L1 -179 5985 5545 1319 199 0 0 chr5 96520211 96520447 -103109703 + MER46A DNA MER2_type 1 236 0 1026 210 71 24 chr5 96520447 96520899 -103109251 - L1MC1 LINE L1 -619 5545 5055 458 360 19 6 chr5 96522115 96522276 -103107874 - MIR3 SINE MIR -11 197 35 2326 113 88 13 chr5 96522581 96522978 -103107172 + MSTA LTR MaLR 1 427 -1 459 194 0 35 chr5 96523539 96523709 -103106441 + (TA)n Simple_repeat Simple_repeat 2 165 0 1717 189 23 14 chr5 96524107 96524451 -103105699 - MER7A DNA MER2_type 0 346 2 24 32 0 0 chr5 96525344 96525375 -103104775 + AT_rich Low_complexity Low_complexity 1 31 0 2252 219 85 25 chr5 96525699 96526407 -103103743 - L1MC4a LINE L1 -346 5818 5193 294 179 0 0 chr5 96526533 96526589 -103103561 + (TATATG)n Simple_repeat Simple_repeat 2 57 0 185 344 74 33 chr5 96526715 96526837 -103103313 - L2 LINE L2 -9 3263 3137 782 453 53 28 chr5 96526931 96527253 -103102897 - MER2 DNA MER2_type -1 344 15 320 276 0 0 chr5 96527343 96527419 -103102731 - LTR33A LTR ERVL -2 521 446 279 110 137 82 chr5 96527708 96527781 -103102369 - MLT1J LTR MaLR -340 171 95 199 230 207 35 chr5 96528194 96528281 -103101869 - MIR SINE MIR -99 163 62 242 179 18 0 chr5 96528293 96528349 -103101801 + CT-rich Low_complexity Low_complexity 4 60 0 216 0 0 0 chr5 96529575 96529599 -103100551 + (T)n Simple_repeat Simple_repeat 1 24 0 1797 128 32 3 chr5 96531133 96531415 -103098735 + MER7A DNA MER2_type 57 344 -2 192 77 0 0 chr5 96531878 96531904 -103098246 + (GCTTG)n Simple_repeat Simple_repeat 3 28 0 1753 47 0 5 chr5 96532280 96532494 -103097656 + AluY SINE Alu 91 303 -8 189 240 173 13 chr5 96532798 96532873 -103097277 + MIR SINE MIR 175 261 -1 287 105 18 0 chr5 96533003 96533060 -103097090 + (TA)n Simple_repeat Simple_repeat 1 58 0 5780 86 20 2 chr5 96533541 96534346 -103095804 + L1PA14 LINE L1 5334 6152 -9 382 293 160 14 chr5 96535476 96535688 -103094462 + MIR SINE MIR 4 246 -16 260 288 65 77 chr5 96535750 96535920 -103094230 - L2 LINE L2 -1 3271 3104 281 271 86 93 chr5 96535932 96536083 -103094067 + L2 LINE L2 3122 3271 -1 280 320 78 23 chr5 96536108 96536236 -103093914 - L2 LINE L2 -191 3081 2947 691 230 209 5 chr5 96536361 96536552 -103093598 - MIR SINE MIR 0 262 33 1307 244 114 26 chr5 96536575 96537096 -103093054 - L2 LINE L2 -1 3312 2746 3240 228 69 32 chr5 96537834 96539738 -103090412 - L1ME2 LINE L1 -9 6224 4242 183 80 0 0 chr5 96539738 96539763 -103090387 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3240 228 69 32 chr5 96539763 96539974 -103090176 - L1ME2 LINE L1 -1991 4242 4040 1521 291 50 82 chr5 96539980 96541705 -103088445 - L1ME2 LINE L1 -4686 1710 40 297 128 0 0 chr5 96542325 96542372 -103087778 + (CA)n Simple_repeat Simple_repeat 2 48 0 956 172 21 11 chr5 96543225 96543411 -103086739 - Tigger6a DNA MER2_type 0 1083 896 4517 163 31 26 chr5 96543456 96544692 -103085458 + L1PA16 LINE L1 4456 5643 -523 2098 176 45 36 chr5 96544692 96544852 -103085298 + MSTB LTR MaLR 3 160 -266 2307 89 7 0 chr5 96544852 96545144 -103085006 - AluY SINE Alu -17 294 1 2098 176 45 36 chr5 96545144 96545403 -103084747 + MSTB LTR MaLR 160 426 0 4517 163 31 26 chr5 96545403 96545738 -103084412 + L1PA16 LINE L1 5643 5975 -191 * 6926 125 29 9 chr5 96545737 96546668 -103083482 + L1MA3 LINE L1 4125 5036 -1269 2016 116 25 0 chr5 96546668 96546944 -103083206 + AluSx SINE Alu 30 312 0 6926 125 29 9 chr5 96546944 96548150 -103082000 + L1MA3 LINE L1 5036 6305 0 1027 141 70 0 chr5 96548172 96548357 -103081793 + L1PA16 LINE L1 5959 6156 -10 2670 195 179 8 chr5 96548370 96549146 -103081004 - Tigger6a DNA MER2_type -174 909 1 1591 207 17 3 chr5 96549828 96550118 -103080032 - AluJo SINE Alu -18 294 1 804 300 43 23 chr5 96550591 96550848 -103079302 + MIR SINE MIR 1 262 0 468 35 0 0 chr5 96551374 96551432 -103078718 + (TG)n Simple_repeat Simple_repeat 2 59 0 1488 216 19 30 chr5 96551637 96552003 -103078147 + MLT1A1 LTR MaLR 4 365 0 27 29 0 0 chr5 96552814 96552848 -103077302 + AT_rich Low_complexity Low_complexity 1 34 0 562 152 38 0 chr5 96554372 96554477 -103075673 + MER5A DNA MER1_type 4 112 -77 264 314 48 19 chr5 96555265 96555370 -103074780 + L3b LINE CR1 1299 1406 -177 599 259 0 25 chr5 96555571 96555733 -103074417 - MIR SINE MIR -103 159 2 21 82 0 0 chr5 96556868 96556917 -103073233 + AT_rich Low_complexity Low_complexity 1 49 0 29 28 0 0 chr5 96557119 96557155 -103072995 + AT_rich Low_complexity Low_complexity 1 36 0 554 298 67 14 chr5 96557711 96557919 -103072231 + MIR SINE MIR 25 243 -19 1519 186 44 14 chr5 96558848 96559192 -103070958 + L1MB3 LINE L1 5823 6176 -7 1696 186 29 0 chr5 96559262 96559542 -103070608 + AluJb SINE Alu 1 288 -24 216 0 0 0 chr5 96559542 96559566 -103070584 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 14368 192 66 9 chr5 96559777 96560132 -103070018 - L1PB1 LINE L1 -4 6863 6530 668 61 10 0 chr5 96560132 96560230 -103069920 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 14368 192 66 9 chr5 96560230 96566280 -103063870 - L1PB1 LINE L1 -337 6530 81 2314 123 19 16 chr5 96567246 96567620 -103062530 + THE1C LTR MaLR 1 375 0 331 257 103 7 chr5 96567663 96567799 -103062351 - MER46C DNA MER2_type -12 326 178 838 98 8 0 chr5 96567942 96568065 -103062085 + THE1C LTR MaLR 252 375 0 763 229 73 42 chr5 96568108 96568396 -103061754 - MER46C DNA MER2_type -12 326 30 757 139 0 76 chr5 96568489 96568633 -103061517 + FLAM_C SINE Alu 1 133 0 994 246 113 43 chr5 96568679 96569123 -103061027 - L2 LINE L2 -19 3294 2820 201 250 0 0 chr5 96569977 96570021 -103060129 - L2 LINE L2 -19 3294 3251 356 282 28 42 chr5 96570533 96570675 -103059475 - MIR SINE MIR -113 149 10 234 91 0 0 chr5 96573265 96573298 -103056852 + (GA)n Simple_repeat Simple_repeat 2 34 0 2149 185 29 56 chr5 96576279 96576798 -103053352 + MLT1D LTR MaLR 1 505 0 324 0 0 0 chr5 96579570 96579606 -103050544 + (CA)n Simple_repeat Simple_repeat 2 37 0 192 77 0 0 chr5 96580117 96580143 -103050007 + (CA)n Simple_repeat Simple_repeat 2 27 0 310 233 39 87 chr5 96580267 96580370 -103049780 + MIR SINE MIR 152 249 -13 2084 121 30 41 chr5 96581554 96581893 -103048257 + MER1B DNA MER1_type 3 337 0 402 21 0 0 chr5 96584258 96584305 -103045845 + (TG)n Simple_repeat Simple_repeat 1 47 0 378 107 0 0 chr5 96584384 96584440 -103045710 + (TA)n Simple_repeat Simple_repeat 2 57 0 181 79 0 53 chr5 96585298 96585336 -103044814 + (CATATA)n Simple_repeat Simple_repeat 5 40 0 254 315 83 0 chr5 96585474 96585582 -103044568 + MLT1J LTR MaLR 23 139 -372 263 260 100 20 chr5 96586215 96586315 -103043835 - MLT1J LTR MaLR -65 446 339 253 245 306 0 chr5 96586378 96586476 -103043674 + MIR SINE MIR 65 192 -70 273 235 20 0 chr5 96586514 96586565 -103043585 + L2 LINE L2 3244 3295 -18 585 279 83 26 chr5 96587746 96587975 -103042175 - MIR SINE MIR -19 243 2 22 35 0 0 chr5 96588049 96588078 -103042072 + AT_rich Low_complexity Low_complexity 1 29 0 432 243 237 0 chr5 96588111 96588263 -103041887 - MIR SINE MIR -12 250 63 1981 110 4 0 chr5 96589517 96589780 -103040370 + AluSc SINE Alu 17 280 -29 315 0 0 0 chr5 96589783 96589818 -103040332 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 183 289 22 0 chr5 96590028 96590073 -103040077 + L3b LINE CR1 1405 1450 -133 493 287 88 37 chr5 96590180 96590532 -103039618 + L1ME4a LINE L1 5621 5990 -131 825 249 6 0 chr5 96590607 96590772 -103039378 + FAM SINE Alu 1 166 -9 1977 134 17 0 chr5 96591109 96591407 -103038743 + AluSx SINE Alu 1 303 -9 236 216 59 0 chr5 96594909 96594960 -103035190 - L2 LINE L2 -2 3270 3217 258 141 26 51 chr5 96595488 96595566 -103034584 + (TTATA)n Simple_repeat Simple_repeat 4 79 0 227 222 167 0 chr5 96596234 96596324 -103033826 - MLT1H LTR MaLR 0 549 445 686 263 148 42 chr5 96596382 96596759 -103033391 - MLT1H LTR MaLR -128 421 5 443 336 109 50 chr5 96596760 96597117 -103033033 + L2 LINE L2 2890 3267 -5 2119 125 0 26 chr5 96597238 96597542 -103032608 - AluSx SINE Alu -16 296 1 229 132 19 19 chr5 96599099 96599152 -103030998 + GA-rich Low_complexity Low_complexity 1 53 0 288 0 0 0 chr5 96602055 96602087 -103028063 + (CAT)n Simple_repeat Simple_repeat 2 33 0 655 188 0 0 chr5 96604690 96604791 -103025359 - Tigger3(Golem) DNA MER2_type -1 3028 2928 3168 211 129 53 chr5 96605526 96606579 -103023571 - L1MC4 LINE L1 0 8042 6910 497 295 65 20 chr5 96606737 96606937 -103023213 + L2 LINE L2 2855 3063 -250 22 0 0 0 chr5 96608177 96608199 -103021951 + AT_rich Low_complexity Low_complexity 1 22 0 1675 135 42 0 chr5 96608369 96608658 -103021492 + MER33 DNA MER1_type 2 302 -22 264 303 30 0 chr5 96609050 96609116 -103021034 + L2 LINE L2 2290 2357 -957 369 241 109 48 chr5 96609172 96609480 -103020670 + LTR40c LTR ERVL 124 411 -51 429 345 105 19 chr5 96609495 96609820 -103020330 + L2 LINE L2 2344 2696 -618 910 135 0 0 chr5 96610110 96610258 -103019892 + L1MA9 LINE L1 6165 6312 0 2463 41 7 3 chr5 96610490 96610785 -103019365 - AluY SINE Alu -15 296 1 613 312 52 84 chr5 96610892 96611235 -103018915 + L2 LINE L2 2941 3272 0 410 96 14 0 chr5 96611338 96611411 -103018739 + (TC)n Simple_repeat Simple_repeat 1 74 0 1820 202 123 56 chr5 96611434 96611915 -103018235 + MLT2B1 LTR ERVL 8 520 0 723 214 57 38 chr5 96613048 96613258 -103016892 + MER58A DNA MER1_type 2 215 -9 40549 70 5 3 chr5 96613263 96619395 -103010755 + L1PA6 LINE L1 4 6148 -6 1189 210 32 91 chr5 96619776 96620148 -103010002 - MLT2B1 LTR ERVL -64 350 1 373 217 78 121 chr5 96621862 96621970 -103008180 + MER103 DNA DNA 8 108 -58 757 170 92 7 chr5 96621970 96622123 -103008027 + FRAM SINE Alu 1 166 0 373 217 78 121 chr5 96622123 96622180 -103007970 + MER103 DNA DNA 108 166 0 1848 178 0 0 chr5 96622601 96622893 -103007257 - AluJb SINE Alu -20 292 1 2874 271 89 52 chr5 96623425 96625182 -103004968 + L1ME LINE L1 36 1858 -4538 1652 162 12 53 chr5 96625187 96625508 -103004642 + AluJo SINE Alu 3 310 -2 324 227 30 0 chr5 96625592 96625658 -103004492 + MER21B LTR ERV1 1 68 -795 3292 213 14 14 chr5 96625691 96626343 -103003807 + MER21B LTR ERV1 19 670 -193 683 211 158 18 chr5 96626485 96626899 -103003251 + L1ME LINE L1 1974 2496 -3900 285 29 0 0 chr5 96627023 96627057 -103003093 + (CA)n Simple_repeat Simple_repeat 2 35 0 2574 223 50 35 chr5 96627057 96627837 -103002313 + L1ME LINE L1 3969 4760 -1455 23 0 0 0 chr5 96627841 96627864 -103002286 + AT_rich Low_complexity Low_complexity 1 23 0 5442 115 20 48 chr5 96627864 96628768 -103001382 - LTR5 LTR ERVK -90 879 1 694 105 0 0 chr5 96628768 96628863 -103001287 - HERVK LTR ERVK 0 7243 7149 484 114 0 0 chr5 96629072 96629142 -103001008 - HERVK LTR ERVK -1710 5533 5464 * 773 116 0 9 chr5 96629138 96629250 -103000900 - HERVK LTR ERVK -7132 111 1 668 163 54 14 chr5 96629250 96629397 -103000753 - LTR5 LTR ERVK 0 969 817 1317 237 94 38 chr5 96629431 96629917 -103000233 + L1ME LINE L1 4749 5277 -938 2387 100 0 6 chr5 96629917 96630228 -102999922 + AluSx SINE Alu 1 309 -3 1317 237 94 38 chr5 96630228 96630344 -102999806 + L1ME LINE L1 5277 5385 -830 765 203 59 45 chr5 96630430 96630702 -102999448 + L1ME LINE L1 5381 5651 -580 226 130 0 22 chr5 96630706 96630752 -102999398 + L1ME1 LINE L1 6117 6161 -5 293 199 161 68 chr5 96631038 96631199 -102998951 - Charlie8 DNA MER1_type -2139 278 103 6185 82 7 6 chr5 96631857 96632704 -102997446 + L1PA11 LINE L1 5327 6174 0 25 31 0 0 chr5 96632868 96632900 -102997250 + AT_rich Low_complexity Low_complexity 1 32 0 2211 129 42 22 chr5 96633319 96633676 -102996474 + THE1B LTR MaLR 1 364 0 11511 102 6 1 chr5 96633676 96635247 -102994903 + THE1B-int LTR MaLR 1 1580 0 2053 122 102 15 chr5 96635247 96635582 -102994568 + THE1B LTR MaLR 1 364 0 7360 41 2 1 chr5 96636243 96637276 -102992874 + L1PA6 LINE L1 5120 6153 -1 2099 117 0 23 chr5 96637518 96637827 -102992323 - AluSx SINE Alu -10 302 1 1690 141 0 4 chr5 96638110 96638359 -102991791 - AluSx SINE Alu -32 280 33 653 130 0 0 chr5 96638368 96638468 -102991682 + L1P LINE L1 4537 4636 -1510 6960 38 7 0 chr5 96638867 96640200 -102989950 - L1PA6 LINE L1 -1 6153 4790 1842 167 33 6 chr5 96640305 96640641 -102989509 - MER7A DNA MER2_type -1 345 3 206 195 24 0 chr5 96640733 96640774 -102989376 - L3 LINE CR1 -9 1568 1527 216 278 0 56 chr5 96640813 96640885 -102989265 + L2 LINE L2 3246 3313 0 682 216 78 0 chr5 96642433 96642600 -102987550 + L1ME LINE L1 5537 5716 -405 656 256 126 19 chr5 96643145 96643352 -102986798 - MIR SINE MIR -6 256 28 22 56 0 0 chr5 96644530 96644566 -102985584 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr5 96644795 96644821 -102985329 + AT_rich Low_complexity Low_complexity 1 26 0 231 36 0 0 chr5 96644874 96644902 -102985248 + (CA)n Simple_repeat Simple_repeat 2 29 0 22 56 0 0 chr5 96645148 96645184 -102984966 + AT_rich Low_complexity Low_complexity 1 36 0 1777 162 26 87 chr5 96645629 96646018 -102984132 - MLT1A1 LTR MaLR 0 365 1 2399 67 3 3 chr5 96646031 96646330 -102983820 + AluY SINE Alu 1 299 -12 2123 115 7 7 chr5 96649571 96649889 -102980261 - AluSg SINE Alu 0 310 1 477 306 86 34 chr5 96650113 96650437 -102979713 + L1M4c LINE L1 277 617 -6029 3783 228 49 34 chr5 96650561 96653367 -102976783 + L1M4c LINE L1 825 3760 -2884 * 16195 133 11 104 chr5 96653335 96656853 -102973297 + L1PA7 LINE L1 500 3691 -2953 5426 10 0 0 chr5 96656854 96657461 -102972689 + L1PA3 LINE L1 5545 6151 -4 15440 88 9 10 chr5 96657474 96660446 -102969704 + L1PA7 LINE L1 3674 6652 0 1819 125 61 25 chr5 96660446 96660773 -102969377 + Tigger1 DNA MER2_type 2080 2418 0 828 174 0 0 chr5 96661592 96661812 -102968338 + (TGG)n Simple_repeat Simple_repeat 1 220 0 324 318 137 82 chr5 96661812 96662287 -102967863 - L1M2 LINE L1 -5377 1472 972 197 227 0 13 chr5 96662298 96662373 -102967777 + (TGG)n Simple_repeat Simple_repeat 1 74 0 481 155 16 96 chr5 96662538 96662725 -102967425 - L1 LINE L1 -1701 4445 4274 629 212 3 119 chr5 96662913 96663300 -102966850 - L1 LINE L1 -2018 4128 3787 224 111 22 0 chr5 96663301 96663346 -102966804 + (TGG)n Simple_repeat Simple_repeat 1 46 0 5788 209 69 59 chr5 96663379 96663405 -102966745 + L1MC4a LINE L1 3191 3215 -2959 2844 203 9 23 chr5 96663405 96663967 -102966183 + MLT2B3 LTR ERVL 1 554 0 5788 209 69 59 chr5 96663967 96666292 -102963858 + L1MC4a LINE L1 3215 5398 -776 1457 165 72 14 chr5 96666292 96666571 -102963579 + AluSx SINE Alu 1 295 -17 5788 209 69 59 chr5 96666571 96666962 -102963188 + L1MC4a LINE L1 5398 5784 -390 815 183 0 0 chr5 96670035 96670177 -102959973 + FLAM_C SINE Alu 1 142 -1 24 0 0 0 chr5 96670213 96670237 -102959913 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr5 96670839 96670875 -102959275 + AT_rich Low_complexity Low_complexity 1 36 0 14576 116 36 38 chr5 96671252 96672637 -102957513 + Tigger1 DNA MER2_type 1 1386 -1032 1418 154 101 15 chr5 96672637 96672904 -102957246 - AluSx SINE Alu -18 294 5 14576 116 36 38 chr5 96672904 96673309 -102956841 + Tigger1 DNA MER2_type 1386 1790 -628 237 33 0 0 chr5 96673309 96673339 -102956811 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2142 131 0 0 chr5 96673347 96673645 -102956505 - AluSx SINE Alu -14 298 1 14576 116 36 38 chr5 96673645 96674265 -102955885 + Tigger1 DNA MER2_type 1797 2418 0 352 273 93 126 chr5 96674478 96674756 -102955394 + L1ME1 LINE L1 242 510 -5609 379 289 147 26 chr5 96674799 96675290 -102954860 + L1MC4a LINE L1 5821 6370 -1438 2739 170 53 2 chr5 96675485 96675979 -102954171 + MER68 LTR ERV1 44 562 0 241 172 97 43 chr5 96675979 96676072 -102954078 + L1MC5 LINE L1 7422 7519 -442 438 312 77 9 chr5 96676282 96676503 -102953647 + L1ME1 LINE L1 3395 3630 -2499 2708 70 8 14 chr5 96676504 96676860 -102953290 - THE1A LTR MaLR -1 354 1 11274 96 9 11 chr5 96676862 96678442 -102951708 - THE1A-int LTR MaLR -2 1578 1 2381 97 5 46 chr5 96678442 96678812 -102951338 - THE1A LTR MaLR 0 355 1 1784 287 97 36 chr5 96678993 96679316 -102950834 + L1ME1 LINE L1 3773 4075 -2054 2233 99 0 0 chr5 96679316 96679638 -102950512 - AluSq SINE Alu 0 322 1 1784 287 97 36 chr5 96679638 96680680 -102949470 + L1ME1 LINE L1 4075 5223 -906 517 313 161 12 chr5 96680735 96681252 -102948898 + L1ME1 LINE L1 5333 5926 -223 708 193 78 62 chr5 96681266 96681458 -102948692 + MER3 DNA MER1_type 15 209 0 236 161 36 36 chr5 96681414 96681470 -102948680 - MER3 DNA MER1_type -119 90 35 * 22 70 0 0 chr5 96681738 96681781 -102948369 + AT_rich Low_complexity Low_complexity 1 43 0 1805 171 115 43 chr5 96683043 96683435 -102946715 + MLT2B1 LTR ERVL 1 420 -100 5715 115 60 57 chr5 96683461 96683604 -102946546 + Tigger3b DNA MER2_type 1 142 -2886 2153 139 12 18 chr5 96683604 96683943 -102946207 + MER1B DNA MER1_type 1 337 0 5715 115 60 57 chr5 96683943 96684947 -102945203 + Tigger3b DNA MER2_type 142 1231 0 294 146 0 0 chr5 96684947 96684992 -102945158 + MLT2B1 LTR ERVL 471 515 0 5153 134 20 0 chr5 96684995 96685799 -102944351 + L1PA16 LINE L1 5338 6157 -9 460 271 49 35 chr5 96687501 96687645 -102942505 + L2 LINE L2 3168 3313 0 520 279 75 50 chr5 96688479 96688680 -102941470 - MIR SINE MIR -21 241 36 643 184 16 32 chr5 96689944 96690069 -102940081 - FLAM_A SINE Alu -7 126 4 303 316 188 0 chr5 96690407 96690540 -102939610 - MIR SINE MIR -71 191 34 189 241 52 17 chr5 96690549 96690607 -102939543 + MIR SINE MIR 102 161 -101 21 0 0 0 chr5 96690936 96690957 -102939193 + AT_rich Low_complexity Low_complexity 1 21 0 27 35 0 0 chr5 96692431 96692460 -102937690 + AT_rich Low_complexity Low_complexity 1 29 0 547 172 10 68 chr5 96692971 96693163 -102936987 + L1P LINE L1 4742 4922 -1224 6453 85 10 0 chr5 96693881 96695267 -102934883 + L1PA14 LINE L1 4742 6144 -17 12709 107 6 39 chr5 96695455 96697667 -102932483 + L1P3 LINE L1 1 2201 -4260 288 0 0 0 chr5 96698167 96698199 -102931951 + (ATG)n Simple_repeat Simple_repeat 2 33 0 19799 92 7 11 chr5 96700139 96703028 -102927122 + L1P3 LINE L1 2393 5268 -1193 192 327 20 20 chr5 96704044 96704145 -102926005 - L2 LINE L2 -22 3291 3191 3087 204 8 11 chr5 96704636 96704871 -102925279 - L1 LINE L1 -941 5205 4971 2223 123 19 25 chr5 96704871 96705236 -102924914 - THE1B LTR MaLR -1 363 1 3087 204 8 11 chr5 96705236 96705651 -102924499 - L1 LINE L1 -1175 4971 4557 28 0 0 0 chr5 96705971 96705999 -102924151 + AT_rich Low_complexity Low_complexity 1 28 0 672 235 67 0 chr5 96708029 96708178 -102921972 - MIR SINE MIR -1 261 103 717 130 38 2 chr5 96708262 96708502 -102921648 + AluSx SINE Alu 1 295 -17 545 318 40 6 chr5 96708592 96708765 -102921385 - MIR SINE MIR -50 212 34 235 239 9 53 chr5 96709696 96709809 -102920341 + A-rich Low_complexity Low_complexity 2 109 0 8629 142 56 11 chr5 96709955 96711180 -102918970 + L1M2 LINE L1 3677 5009 -1291 2376 109 19 25 chr5 96711180 96711546 -102918604 + THE1B LTR MaLR 1 364 0 8629 142 56 11 chr5 96711546 96712214 -102917936 + L1M2 LINE L1 5009 5646 -654 2314 170 23 0 chr5 96712214 96712603 -102917547 + MER6 DNA MER2_type 1 398 -467 1707 177 7 10 chr5 96712603 96712891 -102917259 + AluJb SINE Alu 1 287 -25 24 0 0 0 chr5 96712891 96712915 -102917235 + AT_rich Low_complexity Low_complexity 1 24 0 1169 177 74 26 chr5 96714901 96715172 -102914978 + MER96B DNA MER1_type? 1 284 -133 21 0 0 0 chr5 96715387 96715408 -102914742 + AT_rich Low_complexity Low_complexity 1 21 0 1014 205 15 10 chr5 96715457 96715662 -102914488 - MER20 DNA MER1_type -12 207 2 522 287 116 57 chr5 96716206 96716749 -102913401 + L1MEd LINE L1 574 1148 -4971 989 219 116 105 chr5 96716774 96717204 -102912946 + HsTC2 DNA Tc2 2 436 -1462 28 48 0 0 chr5 96717220 96717262 -102912888 + AT_rich Low_complexity Low_complexity 1 42 0 2372 84 7 0 chr5 96717751 96718049 -102912101 + AluSc SINE Alu 1 300 -9 338 313 47 33 chr5 96718259 96718409 -102911741 - MLT1I LTR MaLR -14 395 244 556 277 20 20 chr5 96719094 96719243 -102910907 + MIR SINE MIR 7 154 -64 232 178 22 0 chr5 96719702 96719747 -102910403 + L2 LINE L2 3268 3313 0 2232 141 6 3 chr5 96719893 96720234 -102909916 + MLT2C1 LTR ERVL 1 342 -55 189 107 0 0 chr5 96720255 96720283 -102909867 + (TATATG)n Simple_repeat Simple_repeat 5 32 0 314 193 0 0 chr5 96720283 96720340 -102909810 + MLT2C1 LTR ERVL 464 520 0 1992 154 0 28 chr5 96721690 96722008 -102908142 + AluSx SINE Alu 1 309 -3 3057 38 5 3 chr5 96723569 96723941 -102906209 + L1PA7 LINE L1 5782 6154 0 513 253 12 49 chr5 96725853 96726015 -102904135 - L2 LINE L2 0 3313 3158 1498 139 166 0 chr5 96726943 96727202 -102902948 - AluSx SINE Alu 0 302 1 213 327 20 20 chr5 96728465 96728566 -102901584 - L2 LINE L2 -22 3291 3191 2209 169 80 14 chr5 96729915 96730353 -102899797 + MLT1C LTR MaLR 1 467 0 475 276 99 28 chr5 96730768 96730827 -102899323 + MIR SINE MIR 26 79 -183 14416 130 30 16 chr5 96730827 96731765 -102898385 - Tigger1 DNA MER2_type 0 2418 1495 2350 88 0 3 chr5 96731765 96732060 -102898090 - AluSx SINE Alu -7 305 12 14416 130 30 16 chr5 96732060 96733504 -102896646 - Tigger1 DNA MER2_type -923 1495 1 475 276 99 28 chr5 96733504 96733625 -102896525 + MIR SINE MIR 79 219 -43 2070 95 60 0 chr5 96734441 96734725 -102895425 + AluSp SINE Alu 1 301 -12 22 43 0 21 chr5 96734913 96734940 -102895210 + AT_rich Low_complexity Low_complexity 1 28 -18 1904 152 14 0 chr5 96734940 96735237 -102894913 + AluJo SINE Alu 1 301 -11 22 43 0 21 chr5 96735237 96735256 -102894894 + AT_rich Low_complexity Low_complexity 28 46 0 797 172 0 8 chr5 96735515 96735674 -102894476 + FLAM_C SINE Alu 1 158 0 1777 134 0 8 chr5 96735781 96736043 -102894107 - AluJb SINE Alu -52 260 1 2320 103 0 0 chr5 96737270 96737581 -102892569 + AluY SINE Alu 1 311 0 400 296 40 16 chr5 96738815 96738940 -102891210 + MIR3 SINE MIR 3 130 -78 32 43 0 0 chr5 96739129 96739175 -102890975 + AT_rich Low_complexity Low_complexity 1 46 0 496 270 87 31 chr5 96740376 96740698 -102889452 + L1ME4a LINE L1 5543 5882 -239 23 68 0 0 chr5 96741914 96741958 -102888192 + AT_rich Low_complexity Low_complexity 1 44 0 24 32 0 0 chr5 96744486 96744517 -102885633 + GC_rich Low_complexity Low_complexity 1 31 0 213 254 0 30 chr5 96748400 96748467 -102881683 + CT-rich Low_complexity Low_complexity 4 68 0 25 0 0 0 chr5 96750672 96750697 -102879453 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 96753365 96753386 -102876764 + GC_rich Low_complexity Low_complexity 1 21 0 222 215 0 65 chr5 96754335 96754428 -102875722 + CT-rich Low_complexity Low_complexity 4 90 0 22 80 0 0 chr5 96754983 96755033 -102875117 + GC_rich Low_complexity Low_complexity 1 50 0 266 0 0 29 chr5 96755407 96755442 -102874708 + (TC)n Simple_repeat Simple_repeat 1 34 0 905 64 35 6 chr5 96756068 96756241 -102873909 + (TC)n Simple_repeat Simple_repeat 1 178 0 390 180 43 0 chr5 96756243 96756382 -102873768 + CT-rich Low_complexity Low_complexity 1 145 0 180 111 0 0 chr5 96756522 96756549 -102873601 + (A)n Simple_repeat Simple_repeat 1 27 0 276 30 0 0 chr5 96757021 96757054 -102873096 + (TG)n Simple_repeat Simple_repeat 1 33 0 594 87 65 0 chr5 96757522 96757660 -102872490 + CT-rich Low_complexity Low_complexity 2 148 0 240 291 0 0 chr5 96757683 96757738 -102872412 + polypyrimidine Low_complexity Low_complexity 2 56 0 189 0 0 0 chr5 96757786 96757807 -102872343 + (GGA)n Simple_repeat Simple_repeat 3 23 0 228 174 0 22 chr5 96757965 96758011 -102872139 + GA-rich Low_complexity Low_complexity 3 47 0 208 356 26 0 chr5 96758429 96758544 -102871606 + (CCCCAG)n Simple_repeat Simple_repeat 4 121 0 183 100 0 0 chr5 96758573 96758603 -102871547 + (CCG)n Simple_repeat Simple_repeat 1 30 0 249 300 0 10 chr5 96758649 96758749 -102871401 + (CGGG)n Simple_repeat Simple_repeat 3 101 0 26 30 0 0 chr5 96758759 96758792 -102871358 + GC_rich Low_complexity Low_complexity 1 33 0 269 172 16 0 chr5 96759045 96759109 -102871041 + (CGG)n Simple_repeat Simple_repeat 3 67 0 269 87 0 22 chr5 96759159 96759205 -102870945 + (CCCCCT)n Simple_repeat Simple_repeat 4 48 0 24 0 0 0 chr5 96759206 96759230 -102870920 + GC_rich Low_complexity Low_complexity 1 24 0 184 95 0 48 chr5 96759367 96759409 -102870741 + (CGG)n Simple_repeat Simple_repeat 3 42 0 23 0 0 0 chr5 96761289 96761312 -102868838 + AT_rich Low_complexity Low_complexity 1 23 0 26 101 0 0 chr5 96762724 96762813 -102867337 + GC_rich Low_complexity Low_complexity 1 89 0 27 29 0 0 chr5 96762911 96762945 -102867205 + GC_rich Low_complexity Low_complexity 1 34 0 328 82 33 0 chr5 96763044 96763105 -102867045 + (TG)n Simple_repeat Simple_repeat 1 63 0 29 0 0 0 chr5 96766624 96766653 -102863497 + AT_rich Low_complexity Low_complexity 1 29 0 253 333 8 17 chr5 96775940 96776057 -102854093 + GA-rich Low_complexity Low_complexity 1 116 0 254 125 21 0 chr5 96778026 96778074 -102852076 + (CA)n Simple_repeat Simple_repeat 1 49 0 201 74 0 0 chr5 96778845 96778872 -102851278 + (GAA)n Simple_repeat Simple_repeat 2 28 0 537 132 7 44 chr5 96778951 96779087 -102851063 + (TTCC)n Simple_repeat Simple_repeat 2 132 0 315 0 0 0 chr5 96780506 96780541 -102849609 + (CA)n Simple_repeat Simple_repeat 2 36 0 198 71 0 0 chr5 96781026 96781054 -102849096 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 24 0 0 0 chr5 96786369 96786393 -102843757 + GC_rich Low_complexity Low_complexity 1 24 0 4293 141 69 12 chr5 96787048 96787933 -102842217 - Tigger1 DNA MER2_type -1483 935 1 937 185 21 16 chr5 96789080 96789269 -102840881 + AluJo SINE Alu 21 210 -102 1815 139 33 7 chr5 96789310 96789584 -102840566 - AluJb SINE Alu -31 281 1 199 26 0 79 chr5 96790184 96790222 -102839928 + (AGGGGG)n Simple_repeat Simple_repeat 2 36 0 713 306 79 45 chr5 96790434 96791052 -102839098 - L2 LINE L2 -28 3285 2646 328 384 62 31 chr5 96791409 96791893 -102838257 + L2 LINE L2 2345 2843 -471 1203 182 178 8 chr5 96792220 96792462 -102837688 - AluSg SINE Alu -17 283 1 2345 82 10 0 chr5 96792520 96792826 -102837324 + AluSc SINE Alu 1 309 0 2334 103 6 0 chr5 96793163 96793474 -102836676 - AluSq SINE Alu 0 313 1 2070 107 79 0 chr5 96793860 96794140 -102836010 - AluSx SINE Alu -10 302 1 1919 202 0 8 chr5 96794717 96795078 -102835072 + MLT1A1 LTR MaLR 1 358 -7 309 261 0 0 chr5 96795110 96795198 -102834952 - L1M4 LINE L1 -1602 4544 4457 3395 151 20 79 chr5 96795268 96796050 -102834100 - L1MD1 LINE L1 -20 6222 5487 438 213 7 28 chr5 96796021 96796162 -102833988 - L1MD1 LINE L1 -1388 4758 4621 * 1354 255 48 15 chr5 96796178 96796671 -102833479 + MER77 LTR ERV1 41 601 -4 308 272 59 7 chr5 96796724 96796860 -102833290 - L1MD1 LINE L1 -1521 4625 4483 371 249 131 39 chr5 96796866 96796932 -102833218 - L1MD1 LINE L1 -1742 4404 4345 1953 123 3 55 chr5 96796932 96797242 -102832908 + AluSp SINE Alu 1 294 -19 371 249 131 39 chr5 96797242 96797404 -102832746 - L1MD1 LINE L1 -1801 4345 4155 2301 77 0 59 chr5 96798166 96798490 -102831660 + AluSg SINE Alu 1 305 -5 2284 101 0 10 chr5 96798565 96798862 -102831288 + AluSx SINE Alu 1 294 -18 357 24 0 0 chr5 96798957 96798999 -102831151 + (TG)n Simple_repeat Simple_repeat 2 43 0 311 179 54 0 chr5 96799008 96799064 -102831086 + L1MCa LINE L1 2006 2064 -4362 2343 105 0 0 chr5 96799322 96799616 -102830534 + AluSg SINE Alu 2 295 -15 1054 206 14 14 chr5 96800379 96800597 -102829553 - AluJb SINE Alu -7 305 88 1592 144 12 101 chr5 96800597 96800776 -102829374 - AluJo SINE Alu -15 297 158 1992 151 3 7 chr5 96800776 96801075 -102829075 - AluSx SINE Alu -14 298 1 1592 144 12 101 chr5 96801075 96801221 -102828929 - AluJo SINE Alu -154 158 1 2248 114 3 3 chr5 96801889 96802195 -102827955 - AluSp SINE Alu -7 306 1 412 333 61 6 chr5 96802296 96802461 -102827689 - MIR SINE MIR -17 245 72 435 238 67 0 chr5 96802462 96802567 -102827583 + L2 LINE L2 3193 3304 -9 2296 102 0 7 chr5 96803693 96803997 -102826153 + AluSc SINE Alu 1 302 -7 658 206 92 99 chr5 96805234 96805627 -102824523 - L1MC4 LINE L1 -1 8041 7652 2008 128 0 7 chr5 96805645 96805927 -102824223 - AluSg SINE Alu -30 280 1 1975 132 45 0 chr5 96805932 96806220 -102823930 - AluSx SINE Alu -6 306 6 1812 169 0 10 chr5 96806263 96806564 -102823586 + AluJb SINE Alu 2 299 -13 30 27 0 0 chr5 96806565 96806602 -102823548 + AT_rich Low_complexity Low_complexity 1 37 0 349 277 177 0 chr5 96807408 96807538 -102822612 - L1ME4a LINE L1 -27 6094 5942 682 292 60 58 chr5 96807658 96808106 -102822044 + L1ME LINE L1 46 494 -5576 297 125 0 0 chr5 96808551 96808607 -102821543 + (T)n Simple_repeat Simple_repeat 1 56 0 28 29 0 0 chr5 96809260 96809295 -102820855 + AT_rich Low_complexity Low_complexity 1 35 0 258 103 0 0 chr5 96815055 96815094 -102815056 + CER Satellite Satellite 26 64 -32 200 134 30 30 chr5 96817184 96817251 -102812899 + (CCCCG)n Simple_repeat Simple_repeat 3 69 0 28 0 0 0 chr5 96818135 96818163 -102811987 + AT_rich Low_complexity Low_complexity 1 28 0 2771 219 52 10 chr5 96820586 96821302 -102808848 + MER20B DNA MER1_type 1 746 -37 15664 118 9 19 chr5 96822450 96823401 -102806749 - Tigger1 DNA MER2_type 0 2418 1459 2250 106 10 3 chr5 96823401 96823702 -102806448 - AluSg SINE Alu -7 303 1 15664 118 9 19 chr5 96823702 96824015 -102806135 - Tigger1 DNA MER2_type -959 1459 1144 2269 88 34 3 chr5 96824015 96824310 -102805840 - AluSc SINE Alu -5 304 1 15664 118 9 19 chr5 96824310 96825487 -102804663 - Tigger1 DNA MER2_type -1274 1144 1 1040 188 5 16 chr5 96826635 96826827 -102803323 + AluJo SINE Alu 21 210 -102 1884 145 28 10 chr5 96826856 96827146 -102803004 - AluJb SINE Alu -17 295 1 199 26 0 79 chr5 96827746 96827784 -102802366 + (AGGGGG)n Simple_repeat Simple_repeat 2 36 0 675 306 79 45 chr5 96827996 96828614 -102801536 - L2 LINE L2 -28 3285 2646 322 370 68 37 chr5 96828971 96829455 -102800695 + L2 LINE L2 2345 2843 -471 1319 142 179 8 chr5 96829784 96830024 -102800126 - AluSg SINE Alu -19 281 1 2029 107 79 0 chr5 96830410 96830690 -102799460 - AluSx SINE Alu -10 302 1 1889 199 0 8 chr5 96831267 96831628 -102798522 + MLT1A1 LTR MaLR 1 358 -7 296 250 0 0 chr5 96831664 96831748 -102798402 - L1M4 LINE L1 -1606 4540 4457 3299 155 18 79 chr5 96831818 96832591 -102797559 - L1MD1 LINE L1 -20 6222 5497 445 209 7 29 chr5 96832574 96832713 -102797437 - L1MD1 LINE L1 -1390 4756 4621 * 1329 257 48 15 chr5 96832729 96833222 -102796928 + MER77 LTR ERV1 41 601 -4 345 257 0 9 chr5 96833275 96833384 -102796766 - L1MD1 LINE L1 -1521 4625 4518 338 240 135 44 chr5 96833417 96833483 -102796667 - L1MD1 LINE L1 -1742 4404 4345 2095 100 3 55 chr5 96833483 96833793 -102796357 + AluSp SINE Alu 1 294 -19 338 240 135 44 chr5 96833793 96833955 -102796195 - L1MD1 LINE L1 -1801 4345 4155 2243 80 0 59 chr5 96834717 96835041 -102795109 + AluSg SINE Alu 1 305 -5 2245 101 0 10 chr5 96835116 96835413 -102794737 + AluSx SINE Alu 1 294 -18 357 24 0 0 chr5 96835508 96835550 -102794600 + (TG)n Simple_repeat Simple_repeat 2 43 0 306 286 0 22 chr5 96835560 96835651 -102794499 + L1MC4 LINE L1 6614 6702 -1340 2314 105 0 0 chr5 96835909 96836203 -102793947 + AluSg SINE Alu 2 295 -15 1018 191 28 28 chr5 96836969 96837184 -102792966 - AluJb SINE Alu -10 302 88 1568 144 12 101 chr5 96837184 96837363 -102792787 - AluJo SINE Alu -15 297 158 1976 151 3 7 chr5 96837363 96837662 -102792488 - AluSx SINE Alu -14 298 1 1568 144 12 101 chr5 96837662 96837808 -102792342 - AluJo SINE Alu -154 158 1 2248 114 3 3 chr5 96838476 96838782 -102791368 - AluSp SINE Alu -7 306 1 412 333 61 6 chr5 96838883 96839048 -102791102 - MIR SINE MIR -17 245 72 435 238 67 0 chr5 96839049 96839154 -102790996 + L2 LINE L2 3193 3304 -9 2311 99 0 7 chr5 96840280 96840584 -102789566 + AluSc SINE Alu 1 302 -7 658 206 92 99 chr5 96841823 96842216 -102787934 - L1MC4 LINE L1 -1 8041 7652 2008 128 0 7 chr5 96842234 96842516 -102787634 - AluSg SINE Alu -30 280 1 1975 132 45 0 chr5 96842521 96842809 -102787341 - AluSx SINE Alu -6 306 6 1802 170 0 10 chr5 96842852 96843152 -102786998 + AluJb SINE Alu 2 298 -14 30 27 0 0 chr5 96843155 96843192 -102786958 + AT_rich Low_complexity Low_complexity 1 37 0 440 173 106 0 chr5 96844580 96844684 -102785466 + AluSq/x SINE Alu 1 115 -198 362 268 313 17 chr5 96845910 96846089 -102784061 - MIR SINE MIR -16 246 15 181 338 71 39 chr5 96846618 96846691 -102783459 - L2 LINE L2 0 3313 3244 2200 134 0 0 chr5 96846691 96846990 -102783160 - AluSx SINE Alu -13 299 1 181 338 71 39 chr5 96846990 96847070 -102783080 - L2 LINE L2 -69 3244 3155 316 213 0 0 chr5 96847190 96847251 -102782899 - MARNA DNA Mariner -170 416 356 787 183 23 23 chr5 96847251 96847426 -102782724 + MIR SINE MIR 88 262 0 1794 175 45 14 chr5 96847983 96848337 -102781813 + MLT1A1 LTR MaLR 1 365 0 291 311 158 71 chr5 96848418 96848547 -102781603 + L2 LINE L2 2526 2677 -637 2029 158 3 23 chr5 96848547 96848889 -102781261 - MER1B DNA MER1_type -1 336 2 291 311 158 71 chr5 96848889 96848942 -102781208 + L2 LINE L2 2677 2724 -590 309 267 147 0 chr5 96849718 96849834 -102780316 - L1ME4a LINE L1 -47 6074 5942 725 285 52 69 chr5 96849954 96850449 -102779701 + L1ME LINE L1 46 532 -5538 358 214 39 0 chr5 96850607 96850710 -102779440 + L1ME LINE L1 521 627 -5443 1697 268 108 37 chr5 96850843 96851406 -102778744 + L1ME LINE L1 641 1163 -5098 1696 180 10 13 chr5 96851406 96851711 -102778439 + AluJo SINE Alu 1 304 -8 1697 268 108 37 chr5 96851711 96851837 -102778313 + L1ME LINE L1 1163 1279 -4982 1951 152 3 3 chr5 96851837 96852133 -102778017 - AluJb SINE Alu -16 296 1 1697 268 108 37 chr5 96852133 96852830 -102777320 + L1ME LINE L1 1279 2153 -4108 233 207 23 103 chr5 96852825 96852912 -102777238 + L1ME LINE L1 5469 5548 -616 * 240 284 49 0 chr5 96853413 96853494 -102776656 + MER103 DNA DNA 75 159 -7 452 213 88 37 chr5 96853698 96853834 -102776316 + MIR SINE MIR 86 228 -34 2379 58 0 14 chr5 96853945 96854239 -102775911 + AluY SINE Alu 22 311 0 301 200 0 0 chr5 96854294 96854354 -102775796 - MER103 DNA DNA -81 85 26 399 355 20 30 chr5 96854449 96854646 -102775504 - MIR SINE MIR -55 207 13 452 301 62 0 chr5 96854704 96854817 -102775333 - L2 LINE L2 -5 3267 3148 507 295 52 21 chr5 96855663 96855856 -102774294 + MIR SINE MIR 8 206 -56 595 177 90 35 chr5 96856563 96856811 -102773339 + L2 LINE L2 3082 3311 -2 24 32 0 0 chr5 96856942 96856973 -102773177 + AT_rich Low_complexity Low_complexity 1 31 0 367 263 61 0 chr5 96858281 96858380 -102771770 - L2 LINE L2 -14 3258 3154 234 0 0 0 chr5 96859174 96859200 -102770950 + (CATTT)n Simple_repeat Simple_repeat 2 27 0 303 252 0 81 chr5 96859211 96859322 -102770828 - L2 LINE L2 -52 3261 3160 256 318 0 0 chr5 96860384 96860450 -102769700 - L2 LINE L2 -11 3261 3196 198 308 22 44 chr5 96860599 96860690 -102769460 + L2 LINE L2 3184 3272 0 527 301 160 23 chr5 96860829 96861048 -102769102 - MIR SINE MIR -10 252 4 324 344 39 74 chr5 96861736 96861992 -102768158 - L2 LINE L2 -8 3264 3018 1400 87 111 0 chr5 96862253 96862460 -102767690 + MER30 DNA MER1_type 1 230 0 21 36 0 0 chr5 96862480 96862508 -102767642 + AT_rich Low_complexity Low_complexity 1 28 0 1113 221 70 48 chr5 96863500 96863857 -102766293 - MLT1A1 LTR MaLR 0 365 1 1552 177 7 40 chr5 96864763 96865062 -102765088 - AluJo SINE Alu -5 307 19 1639 79 0 0 chr5 96865132 96865335 -102764815 + AluY SINE Alu 84 286 -25 32 0 0 0 chr5 96865335 96865367 -102764783 + AT_rich Low_complexity Low_complexity 1 32 0 1948 158 7 0 chr5 96865529 96865827 -102764323 - AluJb SINE Alu -12 300 1 23 0 0 0 chr5 96867204 96867227 -102762923 + AT_rich Low_complexity Low_complexity 1 23 0 1375 204 56 11 chr5 96868174 96868444 -102761706 - AluJo SINE Alu -30 282 1 22 0 0 0 chr5 96868800 96868822 -102761328 + AT_rich Low_complexity Low_complexity 1 22 0 1669 162 14 7 chr5 96868822 96869106 -102761044 - AluSx SINE Alu -26 286 1 709 309 169 26 chr5 96870658 96871156 -102758994 + L2 LINE L2 2338 2906 -408 2169 107 7 0 chr5 96873016 96873307 -102756843 - AluSc SINE Alu -15 294 2 225 96 19 39 chr5 96874062 96874114 -102756036 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 21 0 0 0 chr5 96875643 96875664 -102754486 + AT_rich Low_complexity Low_complexity 1 21 0 198 283 17 17 chr5 96877321 96877381 -102752769 + MIR3 SINE MIR 126 185 -23 399 292 31 0 chr5 96877461 96877591 -102752559 + L2 LINE L2 3179 3312 -1 2247 105 0 0 chr5 96879174 96879468 -102750682 + AluSx SINE Alu 1 294 -18 25 0 0 0 chr5 96880206 96880231 -102749919 + AT_rich Low_complexity Low_complexity 1 25 0 378 299 0 34 chr5 96881075 96881192 -102748958 - MIR SINE MIR -77 131 19 200 353 59 0 chr5 96881505 96881573 -102748577 + L3b LINE CR1 1510 1581 -2 256 192 39 64 chr5 96881733 96881811 -102748339 + MER103 DNA DNA 68 143 -23 23 33 0 0 chr5 96883204 96883234 -102746916 + AT_rich Low_complexity Low_complexity 1 30 0 429 97 0 0 chr5 96883868 96883940 -102746210 + (CAT)n Simple_repeat Simple_repeat 3 74 0 447 237 34 17 chr5 96884751 96884869 -102745281 + L2 LINE L2 3191 3310 -3 359 297 238 10 chr5 96884920 96885122 -102745028 + MIR SINE MIR 15 262 0 193 247 153 47 chr5 96885148 96885233 -102744917 + L2 LINE L2 3220 3313 0 22 35 0 0 chr5 96885956 96885985 -102744165 + AT_rich Low_complexity Low_complexity 1 29 0 228 239 22 0 chr5 96886706 96886752 -102743398 - MIR SINE MIR -22 240 194 388 329 130 40 chr5 96886969 96887416 -102742734 + L2 LINE L2 650 1136 -2178 305 260 121 31 chr5 96887527 96887934 -102742216 + L1MC/D LINE L1 4989 5426 -743 378 344 90 4 chr5 96887985 96888241 -102741909 + L1MC/D LINE L1 5543 5820 -1988 2411 106 0 0 chr5 96888662 96888974 -102741176 - AluSx SINE Alu 0 312 1 637 360 177 10 chr5 96889307 96889884 -102740266 + L2 LINE L2 2257 2929 -385 325 318 35 0 chr5 96889988 96890073 -102740077 + L2 LINE L2 3162 3249 -23 819 122 0 0 chr5 96890389 96890504 -102739646 - AluSp/q SINE Alu -9 304 190 31114 109 13 56 chr5 96890504 96896892 -102733258 + L1PA7 LINE L1 51 6151 -3 2236 122 0 0 chr5 96897479 96897782 -102732368 + AluSx SINE Alu 1 303 -9 24 53 0 0 chr5 96898506 96898544 -102731606 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr5 96898684 96898707 -102731443 + AT_rich Low_complexity Low_complexity 1 23 0 920 242 114 58 chr5 96898951 96899310 -102730840 - L2 LINE L2 0 3313 2935 404 282 105 48 chr5 96899433 96899557 -102730593 - L2 LINE L2 -3 3269 3139 616 271 28 6 chr5 96899758 96899935 -102730215 - MIR SINE MIR -78 184 4 189 340 117 19 chr5 96902701 96902804 -102727346 + MIR SINE MIR 29 141 -67 278 266 31 0 chr5 96902945 96903009 -102727141 - MIR3 SINE MIR -39 169 104 603 235 53 123 chr5 96903022 96903324 -102726826 + L2 LINE L2 3032 3312 -1 223 271 271 21 chr5 96904010 96904150 -102726000 + MIR SINE MIR 48 222 -40 1400 148 68 42 chr5 96905003 96905267 -102724883 + AluJb SINE Alu 16 286 -26 387 0 0 0 chr5 96906309 96906352 -102723798 + (TG)n Simple_repeat Simple_repeat 2 44 0 2983 179 13 18 chr5 96906669 96907271 -102722879 + L1MB7 LINE L1 5570 6168 -16 2081 113 10 3 chr5 96907285 96907578 -102722572 + AluSc SINE Alu 1 295 -14 32 57 0 0 chr5 96908123 96908176 -102721974 + AT_rich Low_complexity Low_complexity 1 53 0 2274 119 0 0 chr5 96908262 96908574 -102721576 - AluSx SINE Alu 0 312 1 445 219 56 31 chr5 96908664 96908824 -102721326 - L1MC4 LINE L1 -1 8041 7878 2150 132 9 9 chr5 96909094 96909428 -102720722 - MER1B DNA MER1_type 0 337 4 1274 145 59 55 chr5 96909593 96909882 -102720268 + L1MA9 LINE L1 6017 6306 -6 2102 128 3 0 chr5 96910052 96910356 -102719794 + AluSg SINE Alu 1 305 -5 23 33 0 0 chr5 96910358 96910388 -102719762 + AT_rich Low_complexity Low_complexity 1 30 0 216 343 30 10 chr5 96910535 96910634 -102719516 - MIR3 SINE MIR -54 154 54 * 289 211 14 28 chr5 96910633 96910704 -102719446 + MIR SINE MIR 183 252 -10 602 276 15 44 chr5 96910882 96911085 -102719065 + Charlie8 DNA MER1_type 9 205 -2212 23 0 0 0 chr5 96911552 96911575 -102718575 + AT_rich Low_complexity Low_complexity 1 23 0 192 40 0 0 chr5 96911892 96911917 -102718233 + (T)n Simple_repeat Simple_repeat 1 25 0 421 264 33 22 chr5 96912232 96912414 -102717736 + L1M4 LINE L1 12 195 -6347 216 0 0 0 chr5 96912941 96912965 -102717185 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 983 223 54 4 chr5 96913108 96913386 -102716764 + L1M4 LINE L1 4594 4885 -1759 3212 156 18 30 chr5 96913386 96914473 -102715677 + L1M1 LINE L1 4623 5695 -610 22 0 0 0 chr5 96916044 96916066 -102714084 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr5 96917421 96917446 -102712704 + (A)n Simple_repeat Simple_repeat 1 25 0 180 0 0 0 chr5 96918168 96918188 -102711962 + (T)n Simple_repeat Simple_repeat 1 20 0 2317 81 14 0 chr5 96918560 96918856 -102711294 - AluSg SINE Alu -10 300 1 2213 72 24 10 chr5 96918887 96919177 -102710973 + AluY SINE Alu 1 294 -17 189 0 0 0 chr5 96919414 96919435 -102710715 + (CAA)n Simple_repeat Simple_repeat 2 22 0 272 235 148 17 chr5 96920044 96920159 -102709991 - MIR3 SINE MIR -6 202 73 618 337 21 11 chr5 96920874 96921064 -102709086 - L3 LINE CR1 -2 1575 1384 200 133 0 0 chr5 96922429 96922459 -102707691 - MIR3 SINE MIR -29 179 150 23 0 0 0 chr5 96924341 96924364 -102705786 + AT_rich Low_complexity Low_complexity 1 23 0 454 237 40 24 chr5 96925128 96925296 -102704854 - HsTC2 DNA Tc2 -7 1891 4 3195 166 0 4 chr5 96925412 96925925 -102704225 - MER44D DNA MER2_type -39 566 1 515 232 71 35 chr5 96927261 96927459 -102702691 + MLT1K LTR MaLR 379 583 -5 21 0 0 0 chr5 96928074 96928095 -102702055 + AT_rich Low_complexity Low_complexity 1 21 0 203 147 0 0 chr5 96929825 96929859 -102700291 + (TC)n Simple_repeat Simple_repeat 1 34 0 187 231 0 39 chr5 96930067 96930119 -102700031 + L2 LINE L2 3263 3312 -1 2122 134 22 67 chr5 96931867 96932271 -102697879 + MLT1B LTR MaLR 1 386 -4 522 226 24 91 chr5 96933796 96933918 -102696232 - L1ME LINE L1 -346 5775 5677 2190 129 0 0 chr5 96933918 96934227 -102695923 - AluSc SINE Alu 0 309 1 522 226 24 91 chr5 96934227 96934356 -102695794 - L1ME LINE L1 -444 5677 5541 1614 82 19 0 chr5 96935579 96935785 -102694365 - AluSx SINE Alu -102 210 1 5564 184 44 31 chr5 96937498 96939673 -102690477 + L1MB4 LINE L1 3952 6155 -25 616 98 0 0 chr5 96939812 96939894 -102690256 - AluSc SINE Alu -227 82 1 186 43 0 0 chr5 96939971 96939994 -102690156 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 505 308 101 42 chr5 96939995 96940401 -102689749 + L1M4 LINE L1 3059 3488 -2658 577 289 100 13 chr5 96940429 96940730 -102689420 + L1MEd LINE L1 58 384 -5735 343 313 56 34 chr5 96943340 96943519 -102686631 + L2 LINE L2 1819 2001 -1313 256 297 14 0 chr5 96943529 96943603 -102686547 + L2 LINE L2 2221 2295 -1019 2429 84 0 0 chr5 96944161 96944471 -102685679 + AluSg SINE Alu 1 310 0 21 0 0 0 chr5 96947260 96947281 -102682869 + AT_rich Low_complexity Low_complexity 1 21 0 2484 149 39 56 chr5 96948601 96949137 -102681013 - Tigger6 DNA MER2_type 0 1597 1071 1832 188 144 3 chr5 96949116 96949499 -102680651 - Tigger6b DNA MER2_type -1153 444 8 * 454 211 64 0 chr5 96949500 96949609 -102680541 - MIR SINE MIR -15 247 132 324 297 59 34 chr5 96950024 96950142 -102680008 + L2 LINE L2 3193 3313 0 1420 193 20 30 chr5 96950536 96950831 -102679319 - AluJb SINE Alu -20 292 1 22 0 0 0 chr5 96951623 96951645 -102678505 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 96952423 96952452 -102677698 + AT_rich Low_complexity Low_complexity 1 29 0 217 227 0 0 chr5 96954227 96954271 -102675879 - L2 LINE L2 -100 3213 3170 453 282 40 52 chr5 96954272 96954446 -102675704 + L2 LINE L2 3142 3313 0 28 48 0 0 chr5 96955231 96955273 -102674877 + AT_rich Low_complexity Low_complexity 1 42 0 3287 231 84 7 chr5 96955391 96956357 -102673793 + L1PB1 LINE L1 6 1045 -5818 14448 212 10 7 chr5 96956362 96961071 -102669079 + L1PB1 LINE L1 1094 6021 -841 42962 49 4 0 chr5 96961076 96967205 -102662945 + L1PA4 LINE L1 1 6152 -3 5450 104 18 26 chr5 96967195 96967718 -102662432 + L1PB1 LINE L1 6016 6531 -336 * 2479 77 0 0 chr5 96967718 96968029 -102662121 + AluY SINE Alu 1 311 0 5450 104 18 26 chr5 96968029 96968363 -102661787 + L1PB1 LINE L1 6531 6866 -1 435 170 0 43 chr5 96968470 96968611 -102661539 + (TA)n Simple_repeat Simple_repeat 1 135 0 1412 191 16 27 chr5 96968633 96968890 -102661260 - AluJo SINE Alu -58 254 1 25 75 0 0 chr5 96969016 96969069 -102661081 + AT_rich Low_complexity Low_complexity 1 53 0 412 202 24 12 chr5 96969739 96969823 -102660327 + L2 LINE L2 3229 3313 0 12339 23 0 0 chr5 96970248 96972473 -102657677 + L1PA3 LINE L1 3925 6152 -3 1742 192 85 6 chr5 96972508 96972872 -102657278 - MLT1F1 LTR MaLR 0 567 175 2706 244 49 20 chr5 96972886 96973584 -102656566 + ERVL LTR ERVL 4578 5295 -469 3314 150 61 21 chr5 96973584 96973784 -102656366 + Tigger1 DNA MER2_type 2 192 -2226 1353 211 3 57 chr5 96973784 96974082 -102656068 - AluJo SINE Alu -30 282 1 3314 150 61 21 chr5 96974082 96974500 -102655650 + Tigger1 DNA MER2_type 192 645 -1773 2787 190 50 2 chr5 96974479 96974996 -102655154 - MER82 DNA MER2_type -111 542 1 * 234 276 0 0 chr5 96975019 96975077 -102655073 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 289 163 0 0 chr5 96975082 96975131 -102655019 + MLT2F LTR ERVL 613 661 -2 2237 106 0 0 chr5 96976502 96976803 -102653347 + AluSx SINE Alu 1 301 -11 21 36 0 0 chr5 96977048 96977076 -102653074 + AT_rich Low_complexity Low_complexity 1 28 0 1778 24 0 0 chr5 96977121 96977328 -102652822 + L1PA3 LINE L1 5949 6155 0 210 91 0 0 chr5 96977541 96977574 -102652576 + (CA)n Simple_repeat Simple_repeat 2 34 0 369 0 0 0 chr5 96979096 96979137 -102651013 + (TG)n Simple_repeat Simple_repeat 1 41 0 30 59 0 0 chr5 96979972 96980023 -102650127 + AT_rich Low_complexity Low_complexity 1 51 0 192 152 0 0 chr5 96980517 96980550 -102649600 + CT-rich Low_complexity Low_complexity 1 33 0 * 216 67 0 0 chr5 96980547 96980577 -102649573 + (TCCCC)n Simple_repeat Simple_repeat 2 31 0 1897 138 24 3 chr5 96980581 96980878 -102649272 - AluSq SINE Alu -10 303 1 5007 112 22 30 chr5 96981038 96981840 -102648310 - L1PB4 LINE L1 -1 6155 5360 268 261 54 75 chr5 96982242 96982449 -102647701 - MIR SINE MIR 0 262 62 486 333 111 5 chr5 96982640 96982838 -102647312 - MIR SINE MIR 0 262 44 24 0 0 0 chr5 96982916 96982940 -102647210 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 96983103 96983124 -102647026 + AT_rich Low_complexity Low_complexity 1 21 0 291 276 72 66 chr5 96987502 96987654 -102642496 - MIR SINE MIR -65 197 45 629 275 59 31 chr5 96990060 96990282 -102639868 + MIR SINE MIR 8 235 -27 187 273 30 0 chr5 96990915 96990981 -102639169 + MIR SINE MIR 138 205 -57 2567 35 3 58 chr5 96992536 96992882 -102637268 + L1PA3 LINE L1 5829 6155 0 346 263 46 106 chr5 96992915 96993088 -102637062 - MIR SINE MIR -44 218 59 1556 196 0 42 chr5 96993088 96993394 -102636756 - AluJo SINE Alu -11 301 9 346 263 46 106 chr5 96993394 96993437 -102636713 - MIR SINE MIR -203 59 15 355 250 93 9 chr5 96993513 96993621 -102636529 + L2 LINE L2 3196 3312 -1 1254 251 134 8 chr5 96993711 96994106 -102636044 - LTR16A LTR ERVL -5 445 1 4925 126 26 5 chr5 96994151 96995422 -102634728 - L1PBa LINE L1 -4789 2074 634 1184 133 10 0 chr5 96995422 96995618 -102634532 - L1PBa LINE L1 -6663 200 3 293 288 199 0 chr5 96998740 96998886 -102631264 - MIR3 SINE MIR -4 204 30 22 0 0 0 chr5 97000292 97000314 -102629836 + AT_rich Low_complexity Low_complexity 1 22 0 429 20 0 0 chr5 97000522 97000572 -102629578 + (CA)n Simple_repeat Simple_repeat 1 50 0 21 36 0 0 chr5 97001670 97001698 -102628452 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr5 97002252 97002291 -102627859 + AT_rich Low_complexity Low_complexity 1 39 0 1493 62 31 31 chr5 97003641 97003865 -102626285 + L1PA13 LINE L1 5940 6163 0 22 80 0 0 chr5 97006484 97006534 -102623616 + AT_rich Low_complexity Low_complexity 1 50 0 24 32 0 0 chr5 97008942 97008973 -102621177 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 97009194 97009222 -102620928 + AT_rich Low_complexity Low_complexity 1 28 0 734 132 8 23 chr5 97009411 97009540 -102620610 + L1PA15 LINE L1 6034 6160 -5 208 314 116 16 chr5 97010384 97010505 -102619645 + MIR SINE MIR 41 173 -89 1537 199 10 26 chr5 97010545 97010847 -102619303 - AluJb SINE Alu -14 298 2 1198 170 4 94 chr5 97010913 97011178 -102618972 + MIR SINE MIR 1 241 -21 496 252 63 0 chr5 97011808 97011919 -102618231 + MIR SINE MIR 114 231 -31 1046 224 41 37 chr5 97013033 97013301 -102616849 + MLT1A2 LTR MaLR 87 355 -19 2128 184 29 2 chr5 97013301 97013713 -102616437 + MLT1A2-int LTR MaLR 238 660 -1075 784 241 9 11 chr5 97013767 97013959 -102616191 + MLT1A2 LTR MaLR 193 374 0 1783 146 7 17 chr5 97014976 97015270 -102614880 - AluJo SINE Alu -8 304 14 3880 203 58 36 chr5 97016970 97017219 -102612931 + L1MB7 LINE L1 4020 4262 -1965 273 29 0 0 chr5 97017219 97017253 -102612897 + (CA)n Simple_repeat Simple_repeat 2 35 0 3880 203 58 36 chr5 97017253 97018394 -102611756 + L1MB7 LINE L1 4262 5550 -677 762 198 6 17 chr5 97018394 97018566 -102611584 + L1MB7 LINE L1 6002 6171 -13 3880 203 58 36 chr5 97018566 97018624 -102611526 + L1MB7 LINE L1 5550 5605 -622 2597 27 3 0 chr5 97019045 97019345 -102610805 + AluY SINE Alu 1 301 -10 225 65 0 0 chr5 97021444 97021475 -102608675 + (TG)n Simple_repeat Simple_repeat 2 32 0 185 172 16 0 chr5 97022739 97022803 -102607347 + (TA)n Simple_repeat Simple_repeat 2 66 0 24 32 0 0 chr5 97022895 97022926 -102607224 + AT_rich Low_complexity Low_complexity 1 31 0 581 79 0 0 chr5 97023723 97023799 -102606351 - AluSc SINE Alu -201 108 33 1770 173 3 3 chr5 97024154 97024455 -102605695 + AluJo SINE Alu 2 302 -10 22 0 0 0 chr5 97025059 97025081 -102605069 + AT_rich Low_complexity Low_complexity 1 22 0 462 315 28 14 chr5 97025121 97025264 -102604886 + MIR SINE MIR 7 151 -111 298 258 54 11 chr5 97025610 97025703 -102604447 - MIR SINE MIR 0 262 166 845 192 80 112 chr5 97025712 97026113 -102604037 + LTR7 LTR ERV1 63 450 0 5583 204 61 21 chr5 97026613 97027964 -102602186 + Charlie1a DNA MER1_type 1 1405 -50 2269 92 3 0 chr5 97028058 97028361 -102601789 - AluSx SINE Alu -6 306 3 302 343 135 6 chr5 97028382 97028560 -102601590 - MIR SINE MIR -59 203 3 2407 82 0 0 chr5 97028751 97029055 -102601095 + AluY SINE Alu 1 304 -7 1050 160 0 0 chr5 97029261 97029417 -102600733 + FRAM SINE Alu 1 156 -20 903 119 36 6 chr5 97029424 97029592 -102600558 + GA-rich Low_complexity Low_complexity 1 173 0 436 181 24 0 chr5 97030297 97030380 -102599770 + MER21B LTR ERV1 12 96 -767 628 205 39 43 chr5 97030423 97030671 -102599479 + MER21B LTR ERV1 98 445 -418 1699 113 17 0 chr5 97030929 97031167 -102598983 + AluSc SINE Alu 44 285 -24 33 25 0 0 chr5 97031167 97031207 -102598943 + AT_rich Low_complexity Low_complexity 1 40 0 8149 125 18 1 chr5 97031650 97032928 -102597222 - HSMAR2 DNA Mariner -1 1301 2 32 43 0 0 chr5 97033034 97033080 -102597070 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr5 97033543 97033565 -102596585 + AT_rich Low_complexity Low_complexity 1 22 0 367 330 101 77 chr5 97033577 97033804 -102596346 + L2 LINE L2 2199 2419 -895 8898 26 6 1 chr5 97033804 97035640 -102594510 - L1PA4 LINE L1 0 6155 4317 367 330 101 77 chr5 97035640 97035985 -102594165 + L2 LINE L2 2419 2785 -529 2055 138 0 0 chr5 97035992 97036288 -102593862 - AluSx SINE Alu -16 296 1 192 321 71 12 chr5 97036322 97036406 -102593744 + L2 LINE L2 2769 2857 -457 268 348 60 53 chr5 97036517 97036799 -102593351 + L2 LINE L2 2916 3199 -73 251 266 101 47 chr5 97037038 97037207 -102592943 + L1ME3A LINE L1 5962 6139 -31 330 312 80 8 chr5 97037215 97037340 -102592810 + MER94 DNA DNA 1 134 0 213 154 0 0 chr5 97037473 97037512 -102592638 + (TA)n Simple_repeat Simple_repeat 1 39 0 242 109 0 0 chr5 97037518 97037564 -102592586 + LTR66 LTR ERVL 394 439 -171 230 138 0 69 chr5 97037565 97037623 -102592527 - L1MC4 LINE L1 -1350 6692 6639 21 36 0 0 chr5 97038173 97038201 -102591949 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 97038973 97039004 -102591146 + AT_rich Low_complexity Low_complexity 1 31 0 306 50 0 0 chr5 97041507 97041547 -102588603 + (CA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr5 97042781 97042802 -102587348 + AT_rich Low_complexity Low_complexity 1 21 0 267 43 0 0 chr5 97046229 97046275 -102583875 + LTR66 LTR ERVL 394 439 -171 237 111 0 0 chr5 97046245 97046290 -102583860 - LTR66 LTR ERVL -171 439 395 * 3502 125 29 2 chr5 97046640 97047153 -102582997 - MER1A DNA MER1_type 0 527 1 181 316 0 13 chr5 97047154 97047233 -102582917 + L2 LINE L2 2662 2739 -575 858 285 76 13 chr5 97048432 97048790 -102581360 + LTR16A LTR ERVL 16 444 -6 484 257 80 11 chr5 97049257 97049432 -102580718 + L1ME LINE L1 5628 5814 -307 1331 173 9 0 chr5 97049764 97049995 -102580155 - L1PA16 LINE L1 -9 6157 5925 2375 58 7 0 chr5 97051960 97052255 -102577895 - AluY SINE Alu -14 297 1 311 197 26 0 chr5 97052722 97052798 -102577352 + MER116 DNA Mariner 1 78 -2 9654 157 26 40 chr5 97052905 97056169 -102573981 - L1PA15 LINE L1 -4 6161 2912 500 299 109 40 chr5 97056313 97056634 -102573516 + L2 LINE L2 2310 2652 -662 278 301 220 16 chr5 97056601 97056787 -102573363 - MIR SINE MIR -36 226 3 * 962 174 5 64 chr5 97057120 97057338 -102572812 - MER2 DNA MER2_type 0 345 141 1739 279 92 51 chr5 97057553 97058537 -102571613 + HAL1 LINE L1 4 1028 -1479 1396 129 0 52 chr5 97058537 97058769 -102571381 - AluJb SINE Alu -8 304 85 1494 258 123 30 chr5 97058772 97059282 -102570868 + HAL1 LINE L1 1022 1626 -881 1852 173 10 0 chr5 97059282 97059588 -102570562 + AluSx SINE Alu 1 309 -3 1494 258 123 30 chr5 97059588 97059832 -102570318 + HAL1 LINE L1 1626 1846 -661 313 159 130 0 chr5 97060423 97060492 -102569658 - MLT1D LTR MaLR -427 78 1 389 292 0 0 chr5 97060496 97060585 -102569565 + HERV16 LTR ERVL 1016 1104 -3892 339 44 0 0 chr5 97061120 97061165 -102568985 + (CA)n Simple_repeat Simple_repeat 2 46 0 1864 156 10 3 chr5 97061341 97061649 -102568501 + AluJo SINE Alu 1 310 -2 3598 138 29 0 chr5 97061810 97062388 -102567762 - Tigger1 DNA MER2_type -147 2271 1677 31 44 0 0 chr5 97062604 97062649 -102567501 + AT_rich Low_complexity Low_complexity 1 45 0 23 33 0 0 chr5 97062674 97062704 -102567446 + AT_rich Low_complexity Low_complexity 1 30 0 511 315 59 39 chr5 97062747 97063001 -102567149 - MIR SINE MIR -1 261 3 2332 98 0 7 chr5 97063224 97063529 -102566621 + AluSc SINE Alu 2 304 -5 22 0 0 0 chr5 97064713 97064735 -102565415 + AT_rich Low_complexity Low_complexity 1 22 0 553 344 5 0 chr5 97065189 97065375 -102564775 - MIR SINE MIR 0 262 76 23 33 0 0 chr5 97066504 97066534 -102563616 + AT_rich Low_complexity Low_complexity 1 30 0 194 180 40 40 chr5 97066590 97066640 -102563510 - MIR SINE MIR -66 142 93 41835 37 1 51 chr5 97066742 97073224 -102556926 - L1PA3 LINE L1 -3 6152 3 2772 177 6 4 chr5 97073285 97073755 -102556395 - MER68 LTR ERV1 -70 492 22 243 246 45 80 chr5 97074312 97074511 -102555639 + L1M4 LINE L1 4780 4971 -1175 489 316 92 3 chr5 97074561 97074865 -102555285 + L1ME LINE L1 4891 5221 -925 678 294 90 22 chr5 97074874 97075241 -102554909 + L1ME LINE L1 5265 5656 -506 231 36 0 0 chr5 97075365 97075393 -102554757 + (T)n Simple_repeat Simple_repeat 1 28 0 252 59 0 0 chr5 97076680 97076714 -102553436 + (TG)n Simple_repeat Simple_repeat 2 35 0 1159 196 52 62 chr5 97077339 97077630 -102552520 - AluJo SINE Alu -11 291 4 38 22 0 0 chr5 97077889 97077934 -102552216 + AT_rich Low_complexity Low_complexity 1 45 0 239 178 44 0 chr5 97078062 97078107 -102552043 - L2 LINE L2 -6 3307 3261 2285 65 10 0 chr5 97079153 97079444 -102550706 - AluY SINE Alu -17 294 1 489 191 52 9 chr5 97080071 97080186 -102549964 - MER104 DNA Tc2 -55 125 6 186 191 0 0 chr5 97080490 97080537 -102549613 + (CA)n Simple_repeat Simple_repeat 2 48 0 812 244 13 63 chr5 97080591 97080829 -102549321 - MER8 DNA MER2_type -13 226 1 23 0 0 0 chr5 97084120 97084143 -102546007 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr5 97085532 97085582 -102544568 + AT_rich Low_complexity Low_complexity 1 50 0 24 32 0 0 chr5 97085614 97085645 -102544505 + AT_rich Low_complexity Low_complexity 1 31 0 1937 122 58 61 chr5 97085960 97086322 -102543828 + MER46B DNA MER2_type 1 236 0 21 36 0 0 chr5 97087342 97087370 -102542780 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr5 97087996 97088022 -102542128 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 450 307 231 5 chr5 97088539 97088751 -102541399 - MIR SINE MIR 0 262 3 2250 93 0 10 chr5 97090054 97090356 -102539794 + AluSg SINE Alu 1 299 -11 315 0 0 0 chr5 97093433 97093468 -102536682 + (TG)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr5 97095639 97095661 -102534489 + AT_rich Low_complexity Low_complexity 1 22 0 361 272 212 22 chr5 97096210 97096255 -102533895 - MIR SINE MIR -28 234 199 523 192 32 88 chr5 97096255 97096380 -102533770 - FLAM_A SINE Alu -15 118 1 361 272 212 22 chr5 97096380 97096498 -102533652 - MIR SINE MIR -63 199 30 2179 96 3 3 chr5 97096498 97096791 -102533359 - AluSx SINE Alu -19 293 1 361 272 212 22 chr5 97096791 97096810 -102533340 - MIR SINE MIR -232 30 16 439 149 160 0 chr5 97099555 97099649 -102530501 - L2 LINE L2 -10 3303 3195 249 229 14 0 chr5 97099880 97099950 -102530200 + (TA)n Simple_repeat Simple_repeat 1 71 0 298 244 118 59 chr5 97100165 97100284 -102529866 + MIR SINE MIR 66 191 -71 203 314 0 0 chr5 97100734 97100804 -102529346 + A-rich Low_complexity Low_complexity 5 74 0 21 0 0 0 chr5 97101416 97101437 -102528713 + AT_rich Low_complexity Low_complexity 1 21 0 546 57 0 0 chr5 97105156 97105226 -102524924 + (CA)n Simple_repeat Simple_repeat 2 71 0 22 56 0 0 chr5 97106023 97106059 -102524091 + AT_rich Low_complexity Low_complexity 1 36 0 227 200 0 18 chr5 97108516 97108571 -102521579 + A-rich Low_complexity Low_complexity 2 55 0 285 189 0 0 chr5 97110168 97110221 -102519929 - L2 LINE L2 -5 3267 3215 21 0 0 0 chr5 97110870 97110891 -102519259 + AT_rich Low_complexity Low_complexity 1 21 0 343 102 0 0 chr5 97113014 97113063 -102517087 + AluYb8 SINE Alu 86 134 -174 859 20 0 0 chr5 97113063 97113161 -102516989 + AluY SINE Alu 202 299 -12 2425 76 3 20 chr5 97114868 97115211 -102514939 - L1PB1 LINE L1 -8 6143 5807 1049 278 131 20 chr5 97115225 97115721 -102514429 - MLT1L LTR MaLR -56 559 9 413 312 58 25 chr5 97115731 97116058 -102514092 - L1M4 LINE L1 -1439 4707 4370 1240 119 0 0 chr5 97116081 97116258 -102513892 - AluSc SINE Alu -14 295 119 7193 55 0 0 chr5 97116287 97117206 -102512944 - L1PA7 LINE L1 0 6154 5236 240 400 67 7 chr5 97117236 97117371 -102512779 + L2 LINE L2 3125 3267 -5 455 235 10 20 chr5 97117833 97117935 -102512215 + MER63 DNA MER1_type 960 1060 0 1610 204 33 28 chr5 97118088 97118481 -102511669 + L1ME3A LINE L1 5773 6167 -3 2176 116 7 0 chr5 97118615 97118916 -102511234 - AluSq SINE Alu -8 305 3 2616 71 6 0 chr5 97118928 97119280 -102510870 + L1PA8 LINE L1 5817 6170 -2 29 28 0 0 chr5 97119368 97119404 -102510746 + AT_rich Low_complexity Low_complexity 1 36 0 243 241 17 17 chr5 97122229 97122287 -102507863 + CT-rich Low_complexity Low_complexity 3 60 0 2359 63 7 17 chr5 97123669 97123971 -102506179 + AluSp SINE Alu 1 299 -14 1013 235 25 5 chr5 97124387 97124591 -102505559 + Tigger7 DNA MER2_type 2 209 -524 1508 194 47 0 chr5 97126284 97126562 -102503588 - AluJo SINE Alu -21 291 1 3965 143 38 27 chr5 97126683 97127391 -102502759 - Tigger2 DNA MER2_type 0 2718 2003 537 212 0 0 chr5 97127402 97127520 -102502630 + CT-rich Low_complexity Low_complexity 1 118 0 1259 98 0 35 chr5 97127540 97127714 -102502436 - AluSq SINE Alu -144 169 2 13086 120 19 10 chr5 97127714 97129705 -102500445 - Tigger2 DNA MER2_type -707 2011 4 325 343 36 0 chr5 97129748 97129885 -102500265 + MIR SINE MIR 104 245 -17 27 0 0 0 chr5 97130753 97130780 -102499370 + AT_rich Low_complexity Low_complexity 1 27 0 27 0 0 0 chr5 97130848 97130875 -102499275 + AT_rich Low_complexity Low_complexity 1 27 0 434 227 173 27 chr5 97130985 97131135 -102499015 - MER5B DNA MER1_type -6 172 1 558 225 0 47 chr5 97131135 97131264 -102498886 + MER5B DNA MER1_type 56 178 0 2129 108 41 0 chr5 97131380 97131675 -102498475 + AluSx SINE Alu 1 307 -5 1541 192 7 7 chr5 97132209 97132506 -102497644 - AluJo SINE Alu -15 297 1 461 292 69 13 chr5 97132662 97132853 -102497297 + MIR SINE MIR 15 211 -51 338 246 181 76 chr5 97132890 97133061 -102497089 + MIR SINE MIR 12 200 -62 2190 86 0 36 chr5 97133896 97134197 -102495953 + AluSc SINE Alu 1 290 -19 1801 176 33 24 chr5 97134262 97134591 -102495559 + MER2 DNA MER2_type 1 332 -13 26 30 0 0 chr5 97137515 97137548 -102492602 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr5 97139236 97139261 -102490889 + AT_rich Low_complexity Low_complexity 1 25 0 211 229 1 36 chr5 97139273 97139355 -102490795 + A-rich Low_complexity Low_complexity 1 60 0 591 299 139 19 chr5 97139535 97139909 -102490241 - L1MC/D LINE L1 -1984 5824 5406 23 0 0 0 chr5 97140794 97140817 -102489333 + AT_rich Low_complexity Low_complexity 1 23 0 1325 201 77 4 chr5 97140889 97141163 -102488987 + AluJo SINE Alu 1 294 -18 251 178 0 41 chr5 97141163 97141236 -102488914 + G-rich Low_complexity Low_complexity 4 73 0 192 212 0 35 chr5 97141223 97141308 -102488842 + GA-rich Low_complexity Low_complexity 1 82 0 * 336 271 35 83 chr5 97141397 97141626 -102488524 + HAL1 LINE L1 164 381 -2126 1811 113 106 4 chr5 97141735 97142010 -102488140 + AluSx SINE Alu 1 303 -9 1321 246 130 62 chr5 97142125 97143153 -102486997 + HAL1 LINE L1 1072 2169 -338 326 323 62 47 chr5 97143167 97143359 -102486791 + HAL1 LINE L1 2297 2491 -16 276 224 114 55 chr5 97143451 97143652 -102486498 - L1MEd LINE L1 -4917 1202 990 277 324 173 7 chr5 97143666 97143805 -102486345 - L1MEd LINE L1 -5372 747 586 657 198 6 110 chr5 97144000 97144086 -102486064 - FRAM SINE Alu -149 163 70 198 0 0 0 chr5 97144086 97144108 -102486042 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7483 22 8 0 chr5 97144108 97145353 -102484797 - L1PA3 LINE L1 -18 6137 4885 657 198 6 110 chr5 97145353 97145447 -102484703 - FRAM SINE Alu -240 72 1 566 110 33 0 chr5 97145733 97145824 -102484326 - L1MA3 LINE L1 -1 6304 6211 2082 67 0 0 chr5 97145873 97146128 -102484022 + AluSc SINE Alu 19 273 -36 279 54 0 0 chr5 97146130 97146167 -102483983 + (TAA)n Simple_repeat Simple_repeat 1 37 0 4426 104 13 87 chr5 97146168 97146519 -102483631 - L1MA3 LINE L1 -87 6218 5868 3340 200 12 43 chr5 97146519 97146986 -102483164 - L1PA11 LINE L1 -250 5924 5444 1759 123 0 0 chr5 97146986 97147237 -102482913 + AluSx SINE Alu 51 301 -11 2129 123 3 3 chr5 97147239 97147549 -102482601 + AluSg SINE Alu 1 310 0 3340 200 12 43 chr5 97147549 97148333 -102481817 - L1PA11 LINE L1 -731 5443 4719 583 99 33 0 chr5 97148340 97148431 -102481719 + L1MA3 LINE L1 6211 6304 -1 1177 153 0 0 chr5 97148694 97148897 -102481253 + L1 LINE L1 4532 4734 -1412 * 17551 142 40 8 chr5 97148892 97151249 -102478901 - L1M1 LINE L1 -4570 2995 528 356 0 23 0 chr5 97151249 97151293 -102478857 + (CACAG)n Simple_repeat Simple_repeat 4 48 0 17551 142 40 8 chr5 97151293 97151827 -102478323 - L1M1 LINE L1 -7037 528 12 30 0 0 0 chr5 97155548 97155578 -102474572 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr5 97155746 97155776 -102474374 + AT_rich Low_complexity Low_complexity 1 30 0 614 269 50 0 chr5 97155831 97156013 -102474137 - MIR SINE MIR 0 262 72 279 0 0 0 chr5 97156723 97156754 -102473396 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 687 271 14 66 chr5 97156873 97157161 -102472989 + L2 LINE L2 3023 3295 -18 1506 160 8 0 chr5 97158035 97158272 -102471878 + AluJb SINE Alu 57 295 -17 274 330 0 11 chr5 97159943 97160031 -102470119 + L2 LINE L2 3227 3313 0 204 250 83 14 chr5 97160301 97160373 -102469777 - MIR3 SINE MIR -2 206 130 22 0 0 0 chr5 97160712 97160734 -102469416 + AT_rich Low_complexity Low_complexity 1 22 0 1657 258 156 9 chr5 97161586 97162132 -102468018 + MLT1E2 LTR MaLR 1 626 0 247 197 16 0 chr5 97162927 97162988 -102467162 + L1MCa LINE L1 72 133 -6293 3582 205 99 59 chr5 97163873 97165933 -102464217 + L1MCa LINE L1 21 2175 -4251 197 162 27 0 chr5 97166311 97166348 -102463802 - MIR SINE MIR -11 251 214 21 82 0 0 chr5 97167050 97167099 -102463051 + AT_rich Low_complexity Low_complexity 1 49 0 1973 81 0 8 chr5 97167578 97167836 -102462314 - AluY SINE Alu -17 294 39 470 156 0 0 chr5 97167936 97168055 -102462095 + AluSp/q SINE Alu 217 313 0 11726 210 39 42 chr5 97168706 97169229 -102460921 + L1PA16 LINE L1 781 1304 -4919 869 158 0 0 chr5 97169229 97169362 -102460788 + FLAM_C SINE Alu 1 133 0 11726 210 39 42 chr5 97169362 97169383 -102460767 + L1PA16 LINE L1 1304 1324 -4899 1552 186 6 35 chr5 97169383 97169695 -102460455 - AluJo SINE Alu -9 303 1 11726 210 39 42 chr5 97169695 97171468 -102458682 + L1PA16 LINE L1 1324 3101 -3122 2220 100 0 10 chr5 97171468 97171777 -102458373 + AluY SINE Alu 1 306 -5 11726 210 39 42 chr5 97171777 97172872 -102457278 + L1PA16 LINE L1 3101 4198 -2025 1259 158 138 60 chr5 97172872 97173220 -102456930 + THE1C LTR MaLR 1 375 0 11726 210 39 42 chr5 97173220 97173741 -102456409 + L1PA16 LINE L1 4198 4719 -1504 192 40 0 0 chr5 97173741 97173766 -102456384 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 11726 210 39 42 chr5 97173766 97175228 -102454922 + L1PA16 LINE L1 4719 6223 0 1663 164 35 9 chr5 97175266 97175584 -102454566 + L1MA4A LINE L1 5969 6294 -9 799 277 113 30 chr5 97176637 97177326 -102452824 - L1MEd LINE L1 -4734 1576 785 1916 148 3 10 chr5 97177506 97177803 -102452347 - AluJb SINE Alu -15 297 3 43 20 0 0 chr5 97178064 97178114 -102452036 + AT_rich Low_complexity Low_complexity 1 50 0 227 208 19 0 chr5 97178736 97178789 -102451361 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 3253 204 159 45 chr5 97178841 97178963 -102451187 + L1MC4 LINE L1 6675 6782 -1260 1735 182 16 58 chr5 97178963 97179213 -102450937 - MER7A DNA MER2_type -2692 346 116 1859 138 0 7 chr5 97179213 97179489 -102450661 + AluSx SINE Alu 5 278 -34 1735 182 16 58 chr5 97179489 97179601 -102450549 - MER7A DNA MER2_type -2922 116 1 540 0 0 0 chr5 97179608 97179668 -102450482 + (TG)n Simple_repeat Simple_repeat 2 61 0 3253 204 159 45 chr5 97179668 97180638 -102449512 + L1MC4 LINE L1 6787 7900 -142 297 0 0 0 chr5 97181404 97181437 -102448713 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 1077 113 0 7 chr5 97182451 97182602 -102447548 - AluSx SINE Alu -116 196 47 2369 69 3 0 chr5 97182602 97182907 -102447243 - MER41A LTR ERV1 -248 306 1 7074 89 28 3 chr5 97182907 97183892 -102446258 - MER41A-int LTR ERV1 -2 5944 4935 320 62 0 0 chr5 97183992 97184040 -102446110 + AluSx SINE Alu 253 300 -1 1970 92 0 0 chr5 97184057 97184319 -102445831 + MER41A LTR ERV1 293 554 0 251 333 18 0 chr5 97184874 97184985 -102445165 - L2 LINE L2 -215 3057 2945 1627 149 125 146 chr5 97185076 97185700 -102444450 + LTR36 LTR ERV1 1 611 0 2119 114 0 3 chr5 97186113 97186410 -102443740 + AluSx SINE Alu 1 296 -16 272 83 0 0 chr5 97186510 97186546 -102443604 + L1MB1 LINE L1 6130 6165 -3 222 208 0 0 chr5 97186929 97186982 -102443168 + (CATA)n Simple_repeat Simple_repeat 2 54 0 329 231 187 8 chr5 97187651 97187785 -102442365 - L2 LINE L2 -6 3307 3150 318 203 17 0 chr5 97190053 97190112 -102440038 + MER8 DNA MER2_type 179 238 -1 3022 156 6 4 chr5 97190115 97190621 -102439529 - L1MB1 LINE L1 -140 6028 5522 44 35 0 0 chr5 97190806 97190864 -102439286 + AT_rich Low_complexity Low_complexity 1 58 0 23 0 0 0 chr5 97191423 97191446 -102438704 + AT_rich Low_complexity Low_complexity 1 23 0 2586 287 81 29 chr5 97192173 97193951 -102436199 - L1MEc LINE L1 -4269 2127 71 243 0 0 0 chr5 97194015 97194042 -102436108 + (T)n Simple_repeat Simple_repeat 1 27 0 1230 86 2 295 chr5 97194853 97195273 -102434877 + AluSx SINE Alu 1 297 -5 1859 175 0 0 chr5 97195378 97195669 -102434481 - AluJo SINE Alu -13 299 9 2185 103 0 0 chr5 97195690 97195981 -102434169 - AluSg SINE Alu -10 300 10 1943 136 7 10 chr5 97197249 97197558 -102432592 - AluSx SINE Alu -4 308 1 25 51 0 0 chr5 97197744 97197783 -102432367 + AT_rich Low_complexity Low_complexity 1 39 0 387 0 0 0 chr5 97198510 97198553 -102431597 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 180 0 0 0 chr5 97198724 97198744 -102431406 + (TTTAA)n Simple_repeat Simple_repeat 1 20 0 6661 162 31 9 chr5 97199451 97201274 -102428876 - L1MC1 LINE L1 -17 6596 4736 6426 173 40 41 chr5 97201295 97202650 -102427500 - L1MC1 LINE L1 -5072 1354 1 3348 254 57 24 chr5 97203144 97204274 -102425876 + L1MD1 LINE L1 3989 5163 -983 2004 92 0 4 chr5 97204274 97204534 -102425616 + AluY SINE Alu 38 296 -15 3348 254 57 24 chr5 97204534 97204597 -102425553 + L1MD1 LINE L1 5163 5222 -924 1512 203 100 92 chr5 97204601 97205133 -102425017 + MER82 DNA MER2_type 1 536 -117 700 224 13 7 chr5 97205156 97205308 -102424842 - AluSg/x SINE Alu -24 285 133 378 236 34 11 chr5 97205408 97205497 -102424653 - MER5A DNA MER1_type -90 99 9 2004 258 45 36 chr5 97206626 97207464 -102422686 - L1M4 LINE L1 -2580 3566 2721 392 228 10 30 chr5 97207767 97207868 -102422282 + AluY SINE Alu 198 296 -5 1775 207 83 94 chr5 97207935 97208469 -102421681 + MER82 DNA MER2_type 1 528 -125 1882 145 10 19 chr5 97208469 97208780 -102421370 - AluSx SINE Alu -4 308 1 1775 207 83 94 chr5 97208780 97208874 -102421276 + MER82 DNA MER2_type 528 622 -31 4693 180 29 7 chr5 97208891 97209881 -102420269 + L1MD1 LINE L1 5225 6235 -7 812 226 48 71 chr5 97210673 97210765 -102419385 - LTR40a LTR ERVL -2 517 424 2239 117 0 7 chr5 97210765 97211064 -102419086 + AluSx SINE Alu 3 299 -13 812 226 48 71 chr5 97211064 97211223 -102418927 - LTR40a LTR ERVL -95 424 272 601 301 60 0 chr5 97211743 97211959 -102418191 + L2 LINE L2 1981 2209 -1105 * 684 220 14 83 chr5 97211952 97212170 -102417980 + L2 LINE L2 3111 3313 0 403 343 77 36 chr5 97212316 97212733 -102417417 - L2 LINE L2 -934 2380 1947 409 85 17 0 chr5 97212753 97212812 -102417338 + Alu SINE Alu 1 60 -239 194 360 213 22 chr5 97213121 97213346 -102416804 + L2 LINE L2 3004 3271 -1 507 190 91 156 chr5 97213449 97213854 -102416296 - L1MC4a LINE L1 -1672 6136 5758 249 33 0 0 chr5 97213900 97213930 -102416220 + (TCTCCC)n Simple_repeat Simple_repeat 4 33 0 6159 79 21 34 chr5 97213939 97215579 -102414571 + SVA Other Other 1 1385 -1 756 302 125 55 chr5 97216360 97217016 -102413134 + L2 LINE L2 2274 2975 -339 383 224 154 56 chr5 97217322 97217465 -102412685 - MIR SINE MIR -77 185 29 737 157 61 20 chr5 97217656 97217853 -102412297 - Charlie4 DNA MER1_type -7 1954 1750 584 196 98 12 chr5 97217843 97218006 -102412144 - Charlie4 DNA MER1_type -1728 233 57 * 2143 97 35 0 chr5 97218834 97219123 -102411027 + AluY SINE Alu 1 299 -12 602 309 126 0 chr5 97219158 97219404 -102410746 + MLT1H LTR MaLR 203 479 -70 454 198 89 56 chr5 97219443 97219748 -102410402 - LTR45B LTR ERV1 0 595 305 2415 86 0 0 chr5 97219878 97220180 -102409970 - AluSg1 SINE Alu -7 302 1 6524 208 37 5 chr5 97220411 97222941 -102407209 + L1M3f LINE L1 7 2618 -3710 1876 303 58 47 chr5 97222958 97223888 -102406262 + MER21-int LTR ERV1 3526 4465 -2293 404 198 22 0 chr5 97223921 97224012 -102406138 - L1M2 LINE L1 -4312 2537 2445 693 260 53 0 chr5 97224147 97224316 -102405834 + MER21-int LTR ERV1 1669 1846 -2345 442 298 79 72 chr5 97224476 97224510 -102405640 + HERVL LTR ERVL 1871 1903 -3582 2635 104 0 0 chr5 97224510 97224865 -102405285 + THE1A LTR MaLR 1 355 0 442 298 79 72 chr5 97224865 97225166 -102404984 + HERVL LTR ERVL 1903 2703 -2782 1470 77 0 0 chr5 97225242 97225438 -102404712 - L1P LINE L1 -1574 4572 4377 * 3483 102 2 17 chr5 97225436 97225978 -102404172 + L1P LINE L1 4570 5103 -1043 2675 184 103 93 chr5 97226078 97226533 -102403617 - L1MC3 LINE L1 -136 7649 7108 237 189 54 68 chr5 97226533 97226607 -102403543 - MLT1F1 LTR MaLR -443 124 52 2675 184 103 93 chr5 97226607 97226944 -102403206 - L1MC3 LINE L1 -677 7108 6776 375 248 81 86 chr5 97227838 97228048 -102402102 - MIR SINE MIR -46 216 8 692 127 42 17 chr5 97228577 97228695 -102401455 + L1M3 LINE L1 5646 5766 -417 1093 254 58 31 chr5 97228695 97229093 -102401057 + MLT2B1 LTR ERVL 1 408 -56 1849 173 24 19 chr5 97229097 97229468 -102400682 + L1MB3 LINE L1 5810 6182 -1 1964 273 119 43 chr5 97229498 97230665 -102399485 + L1MD2 LINE L1 3 1081 -5315 1945 160 108 8 chr5 97230665 97231052 -102399098 + MSTB LTR MaLR 1 426 0 1964 273 119 43 chr5 97231052 97231235 -102398915 + L1MD2 LINE L1 1081 1249 -5147 2293 104 13 0 chr5 97231235 97231542 -102398608 + AluSx SINE Alu 1 311 -1 1964 273 119 43 chr5 97231542 97231917 -102398233 + L1MD2 LINE L1 1249 1859 -4537 4513 260 46 19 chr5 97231919 97231972 -102398178 + L1MD2 LINE L1 3363 3413 -2802 2144 106 20 0 chr5 97231972 97232264 -102397886 + AluSg SINE Alu 1 298 -12 4513 260 46 19 chr5 97232264 97232851 -102397299 + L1MD2 LINE L1 3413 3983 -2232 2422 77 0 0 chr5 97232851 97233148 -102397002 + AluY SINE Alu 1 297 -14 4513 260 46 19 chr5 97233148 97234166 -102395984 + L1MD2 LINE L1 3983 5066 -1149 14732 183 32 25 chr5 97234170 97237128 -102393022 + L1PB2 LINE L1 2 2939 -3946 1977 160 0 0 chr5 97237128 97237428 -102392722 + AluJb SINE Alu 3 302 -10 14732 183 32 25 chr5 97237428 97238317 -102391833 + L1PB2 LINE L1 2939 3821 -3064 396 0 0 0 chr5 97238317 97238361 -102391789 + (CA)n Simple_repeat Simple_repeat 1 44 0 14732 183 32 25 chr5 97238361 97239879 -102390271 + L1PB2 LINE L1 3821 5327 -1558 469 121 0 0 chr5 97239879 97239945 -102390205 + AluSq SINE Alu 1 66 -247 5134 97 58 7 chr5 97239945 97240687 -102389463 - LTR17 LTR ERV1 0 780 1 1479 93 0 93 chr5 97240687 97240935 -102389215 + AluSq SINE Alu 63 287 -26 459 0 0 0 chr5 97240935 97240986 -102389164 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 14732 183 32 25 chr5 97240986 97242307 -102387843 + L1PB2 LINE L1 5326 6761 -124 2320 120 29 31 chr5 97242006 97242424 -102387726 + L1MA4A LINE L1 6476 6892 -113 * 1204 296 14 0 chr5 97242541 97242906 -102387244 + L1ME1 LINE L1 5467 5836 -330 4011 198 64 26 chr5 97242909 97244024 -102386126 + L1MD2 LINE L1 5049 6218 -210 192 40 0 0 chr5 97244024 97244049 -102386101 + (CA)n Simple_repeat Simple_repeat 2 26 0 4011 198 64 26 chr5 97244049 97244165 -102385985 + L1MD2 LINE L1 6218 6328 -100 378 265 122 20 chr5 97244944 97245091 -102385059 - MIR SINE MIR -70 192 31 210 270 110 70 chr5 97245091 97245191 -102384959 - MIR SINE MIR -152 110 7 1108 268 54 14 chr5 97245362 97245772 -102384378 + L2 LINE L2 1613 2129 -1185 21 0 0 0 chr5 97246047 97246068 -102384082 + AT_rich Low_complexity Low_complexity 1 21 0 590 271 73 21 chr5 97247565 97247757 -102382393 + MIR SINE MIR 61 262 0 334 274 71 18 chr5 97248075 97248188 -102381962 - L2 LINE L2 -4 3309 3191 2243 105 0 0 chr5 97248765 97249061 -102381089 + AluSg SINE Alu 1 296 -14 329 331 63 14 chr5 97250423 97250565 -102379585 + MIR SINE MIR 32 180 -82 273 301 26 35 chr5 97250987 97251100 -102379050 - MIR SINE MIR -65 143 32 23 54 0 0 chr5 97251856 97251893 -102378257 + AT_rich Low_complexity Low_complexity 1 37 0 942 338 72 5 chr5 97252075 97252489 -102377661 + LTR16A LTR ERVL 9 450 0 3821 163 42 30 chr5 97252537 97253338 -102376812 + L1MB7 LINE L1 5244 6049 -135 991 266 65 93 chr5 97254991 97255577 -102374573 + L1ME3A LINE L1 3874 4408 -1738 2134 137 0 3 chr5 97255577 97255890 -102374260 + AluSq SINE Alu 1 312 -1 991 266 65 93 chr5 97255890 97256522 -102373628 + L1ME3A LINE L1 4408 5057 -1089 345 288 182 17 chr5 97256549 97256785 -102373365 + L1ME3A LINE L1 5427 5701 -469 1690 257 117 8 chr5 97256816 97257303 -102372847 - MLT1F LTR MaLR -2 540 1 347 248 67 67 chr5 97257305 97257515 -102372635 + L1ME3A LINE L1 5731 5940 -224 5972 127 38 78 chr5 97257865 97258143 -102372007 + Tigger3b DNA MER2_type 1 289 -2739 2188 108 0 0 chr5 97258143 97258439 -102371711 - AluSq SINE Alu -17 296 1 5972 127 38 78 chr5 97258439 97258852 -102371298 + Tigger3b DNA MER2_type 289 717 -2311 878 160 20 13 chr5 97258852 97259002 -102371148 + FRAM SINE Alu 5 155 -11 5972 127 38 78 chr5 97259002 97259590 -102370560 + Tigger3b DNA MER2_type 717 1229 -2 22 0 0 0 chr5 97259953 97259975 -102370175 + AT_rich Low_complexity Low_complexity 1 22 0 1725 171 33 13 chr5 97259985 97260290 -102369860 + AluJo SINE Alu 1 311 -1 432 0 0 0 chr5 97261626 97261674 -102368476 + (CA)n Simple_repeat Simple_repeat 2 49 0 5258 74 3 0 chr5 97262164 97262896 -102367254 - L1P LINE L1 -1600 4546 3813 21 36 0 0 chr5 97263148 97263176 -102366974 + AT_rich Low_complexity Low_complexity 1 28 0 372 248 134 13 chr5 97263597 97263746 -102366404 - Charlie8 DNA MER1_type -2136 281 115 1215 170 70 43 chr5 97264102 97264332 -102365818 + AluJo SINE Alu 1 236 -76 1196 228 94 12 chr5 97265317 97265659 -102364491 - MLT1A2 LTR MaLR -4 370 1 1970 187 7 37 chr5 97265659 97266087 -102364063 - MLT1A2-int LTR MaLR 0 1735 1321 363 247 0 0 chr5 97266075 97266164 -102363986 - MLT1A2-int LTR MaLR -1281 90 2 * 1342 195 48 51 chr5 97266165 97266540 -102363610 - MLT1A2 LTR MaLR 0 374 1 1209 253 90 32 chr5 97266818 97267261 -102362889 - MER77 LTR ERV1 -6 599 131 2400 269 29 40 chr5 97268712 97269419 -102360731 + L1PA15 LINE L1 1 700 -6087 2315 110 48 20 chr5 97269419 97269773 -102360377 + THE1B LTR MaLR 1 364 0 2400 269 29 40 chr5 97269773 97269859 -102360291 + L1PA15 LINE L1 700 785 -6002 1661 233 16 7 chr5 97269874 97270308 -102359842 + L1PA15 LINE L1 1270 1707 -5080 11881 183 24 7 chr5 97270309 97271375 -102358775 + L1PA14 LINE L1 2780 3827 -2334 2465 78 0 3 chr5 97271375 97271684 -102358466 + AluY SINE Alu 1 308 -3 11881 183 24 7 chr5 97271684 97273991 -102356159 + L1PA14 LINE L1 3827 6160 -1 14237 210 24 11 chr5 97274147 97279063 -102351087 + L1PA15 LINE L1 1722 6692 -124 282 85 21 0 chr5 97279065 97279112 -102351038 + L1PA16 LINE L1 6119 6166 0 22 0 0 0 chr5 97279650 97279672 -102350478 + AT_rich Low_complexity Low_complexity 1 22 0 951 212 67 10 chr5 97280157 97280350 -102349800 - AluJo SINE Alu -108 204 1 2509 73 0 0 chr5 97281304 97281620 -102348530 - AluYb8 SINE Alu -2 316 1 2861 45 21 3 chr5 97281815 97282197 -102347953 + L1P3 LINE L1 5299 5687 -467 387 294 7 7 chr5 97282198 97282334 -102347816 - MER77-int LTR ERV1 -185 4006 3871 3523 55 4 27 chr5 97282334 97282808 -102347342 + L1PA7 LINE L1 5692 6154 0 819 80 0 9 chr5 97283312 97283424 -102346726 + L1PA7 LINE L1 6042 6152 -2 1173 264 50 85 chr5 97283435 97284034 -102346116 + MER21B-int LTR ERV1 2031 2608 -1583 298 300 12 0 chr5 97284080 97284160 -102345990 + MER21B-int LTR ERV1 2613 2693 -1498 1873 138 21 7 chr5 97284160 97284442 -102345708 + AluSq SINE Alu 1 286 -27 533 170 32 0 chr5 97284471 97284565 -102345585 + AluSg/x SINE Alu 186 282 -27 598 312 56 51 chr5 97284703 97285059 -102345091 + MER21B-int LTR ERV1 2819 3176 -1015 323 330 17 0 chr5 97285132 97285247 -102344903 + MER21B-int LTR ERV1 3203 3319 -872 2044 264 44 32 chr5 97285343 97286021 -102344129 + MER21B-int LTR ERV1 3451 4136 -55 1608 167 54 92 chr5 97286471 97286896 -102343254 + MLT2D LTR ERVL 1 409 -5 237 329 38 84 chr5 97287048 97287386 -102342764 - L2 LINE L2 -184 3088 2765 1236 218 8 59 chr5 97287533 97287891 -102342259 - MLT1A2 LTR MaLR -2 372 33 335 238 20 50 chr5 97288143 97288244 -102341906 - LTR27 LTR ERV1 -4 632 535 370 276 0 41 chr5 97288306 97288404 -102341746 - LTR27 LTR ERV1 -93 927 834 1936 203 28 45 chr5 97288442 97289213 -102340937 - LTR27 LTR ERV1 -141 495 3 1688 200 70 32 chr5 97289340 97289575 -102340575 - LTR40c LTR ERVL -5 460 236 3235 178 57 94 chr5 97289575 97290471 -102339679 + MER21B LTR ERV1 1 863 0 1688 200 70 32 chr5 97290471 97290675 -102339475 - LTR40c LTR ERVL -229 236 4 536 271 65 122 chr5 97290996 97291372 -102338778 - L1MC4a LINE L1 -1 8041 7645 1614 181 60 0 chr5 97291372 97291663 -102338487 - AluSx SINE Alu 0 307 1 536 271 65 122 chr5 97291663 97292195 -102337955 - L1MC4a LINE L1 -397 7645 7104 2047 118 92 18 chr5 97292212 97292550 -102337600 - THE1B LTR MaLR -1 363 1 1408 235 51 37 chr5 97292575 97293009 -102337141 - MLT1E2 LTR MaLR -53 573 134 1517 224 80 34 chr5 97293011 97293448 -102336702 + MSTB2 LTR MaLR 1 457 0 2190 267 102 53 chr5 97293450 97294549 -102335601 + MLT-int LTR MaLR 2 1159 -492 2013 159 22 5 chr5 97294583 97294954 -102335196 - MSTA LTR MaLR -51 377 1 901 213 25 71 chr5 97294956 97295238 -102334912 + THE1C-int LTR MaLR 1161 1429 -222 1899 149 41 25 chr5 97295245 97295608 -102334542 + THE1C LTR MaLR 7 375 0 877 149 8 116 chr5 97295609 97295801 -102334349 + MSTB2-int LTR MaLR 1426 1588 -63 2103 129 0 0 chr5 97295801 97296096 -102334054 - AluSx SINE Alu -17 295 1 877 149 8 116 chr5 97296096 97296144 -102334006 + MSTB2-int LTR MaLR 1588 1640 -11 1443 209 111 28 chr5 97296154 97296576 -102333574 + MSTB2 LTR MaLR 1 457 0 485 200 9 9 chr5 97296577 97296687 -102333463 - MLT1E3 LTR MaLR -456 168 59 226 241 24 24 chr5 97296730 97296813 -102333337 - L1MC4 LINE L1 -865 7177 7095 829 240 79 117 chr5 97296850 97297120 -102333030 - L1MC4 LINE L1 -910 7051 6772 2223 144 3 12 chr5 97297120 97297460 -102332690 + MER1B DNA MER1_type 1 337 0 829 240 79 117 chr5 97297460 97297563 -102332587 - L1MC4 LINE L1 -1189 6772 6695 543 31 0 0 chr5 97297563 97297628 -102332522 + (CATATA)n Simple_repeat Simple_repeat 5 69 0 829 240 79 117 chr5 97297628 97297707 -102332443 - L1MC4 LINE L1 -1266 6695 6615 3216 65 0 20 chr5 97297953 97298396 -102331754 + L1PA7 LINE L1 5721 6154 0 425 265 5 15 chr5 97298794 97298990 -102331160 - L1MC4 LINE L1 -2191 5617 5334 361 267 9 9 chr5 97299110 97299215 -102330935 - L1MC5 LINE L1 -1132 6829 6725 266 280 82 35 chr5 97299277 97299534 -102330616 - L1MC4 LINE L1 -1111 5035 4767 251 292 77 0 chr5 97300000 97300065 -102330085 - MIR SINE MIR -107 101 32 4083 87 5 2 chr5 97301562 97302114 -102328036 + MER41A LTR ERV1 1 554 0 294 105 342 0 chr5 97302114 97302190 -102327960 + MER41A-int LTR ERV1 1 102 -7654 6906 109 164 35 chr5 97302200 97302725 -102327425 + MER41A-int LTR ERV1 1 457 -5489 2281 49 7 3 chr5 97302725 97303011 -102327139 - L1PA5 LINE L1 0 6154 5868 6906 109 164 35 chr5 97303011 97303760 -102326390 + MER41A-int LTR ERV1 457 1439 -4507 383 60 0 104 chr5 97303750 97303817 -102326333 + MER41A-int LTR ERV1 1604 1663 -4283 * 5325 102 7 19 chr5 97303817 97304679 -102325471 + MER41A-int LTR ERV1 2764 3615 -2331 1776 70 70 0 chr5 97304686 97304928 -102325222 - AluY SINE Alu -7 304 46 2466 130 10 2 chr5 97305028 97305437 -102324713 + L1MA1 LINE L1 5889 6300 -2 1395 107 23 0 chr5 97305459 97305702 -102324448 - L1P4 LINE L1 -637 5529 5282 1297 98 0 0 chr5 97305704 97305868 -102324282 - AluSg/x SINE Alu -22 290 127 1875 169 21 0 chr5 97305868 97306205 -102323945 - L1M2 LINE L1 -6498 351 8 1659 161 32 0 chr5 97306223 97306539 -102323611 - L1MB2 LINE L1 -43 6128 5803 25 0 0 0 chr5 97306810 97306835 -102323315 + AT_rich Low_complexity Low_complexity 1 25 0 2893 6 0 0 chr5 97307078 97307393 -102322757 + AluYb8 SINE Alu 1 315 -3 26 0 0 0 chr5 97308604 97308630 -102321520 + AT_rich Low_complexity Low_complexity 1 26 0 2031 139 0 7 chr5 97309997 97310300 -102319850 - AluJb SINE Alu 0 312 12 304 323 205 5 chr5 97310837 97311032 -102319118 - MIR SINE MIR -11 251 18 14175 198 4 6 chr5 97312822 97316154 -102313996 - L1P5 LINE L1 -717 5434 2110 226 146 85 12 chr5 97316266 97316348 -102313802 - L1MB2 LINE L1 0 6171 6084 4463 111 16 54 chr5 97316453 97317273 -102312877 - L1MA4A LINE L1 0 6303 5515 10358 155 20 8 chr5 97317274 97319619 -102310531 + L1M1 LINE L1 1880 4276 -3289 2053 125 4 0 chr5 97319619 97319898 -102310252 + AluSx SINE Alu 10 289 -23 10358 155 20 8 chr5 97319898 97320726 -102309424 + L1M1 LINE L1 4276 5092 -2473 7164 144 8 8 chr5 97320734 97322250 -102307900 + L1M1 LINE L1 5403 6917 -743 795 210 46 11 chr5 97322353 97322615 -102307535 + L1ME2 LINE L1 1168 1438 -5092 * 959 246 144 14 chr5 97322592 97323509 -102306641 + L1ME2 LINE L1 1655 6369 -189 1046 288 46 23 chr5 97323509 97323856 -102306294 - L2 LINE L2 -376 2938 2584 25 75 0 0 chr5 97323955 97324008 -102306142 + AT_rich Low_complexity Low_complexity 1 53 0 391 248 55 69 chr5 97324050 97324195 -102305955 - HAL1 LINE L1 -1539 968 826 230 274 44 30 chr5 97324254 97324389 -102305761 - L1MC4 LINE L1 -2 8040 7904 867 261 129 9 chr5 97324743 97325061 -102305089 - MLT1J LTR MaLR 0 511 156 1864 168 27 0 chr5 97325062 97325390 -102304760 - MER7A DNA MER2_type -10 336 2 1060 176 15 30 chr5 97326213 97326412 -102303738 - AluJo SINE Alu 0 312 117 454 33 0 0 chr5 97326988 97327048 -102303102 - L1PB1 LINE L1 -2 6149 6090 34580 99 16 11 chr5 97327048 97327433 -102302717 - L1PA6 LINE L1 -5 6149 5768 2503 77 0 0 chr5 97327433 97327744 -102302406 - AluY SINE Alu 0 311 1 34580 99 16 11 chr5 97327744 97333460 -102296690 - L1PA6 LINE L1 -386 5768 11 4272 125 1 0 chr5 97333463 97334136 -102296014 - L1PB1 LINE L1 -46 6105 5432 21 57 0 0 chr5 97334697 97334732 -102295418 + AT_rich Low_complexity Low_complexity 1 35 0 3413 151 8 84 chr5 97334739 97335510 -102294640 + L1MB3 LINE L1 5349 6060 -123 1219 250 91 24 chr5 97335811 97336043 -102294107 + L2 LINE L2 2869 3084 -229 2227 98 3 3 chr5 97336043 97336349 -102293801 - AluSx SINE Alu -6 306 1 1219 250 91 24 chr5 97336349 97336532 -102293618 + L2 LINE L2 3084 3312 -1 420 209 70 31 chr5 97338605 97338734 -102291416 + L2 LINE L2 3180 3313 0 215 327 80 18 chr5 97338955 97339068 -102291082 - L2 LINE L2 -473 2841 2722 819 148 214 5 chr5 97339126 97339336 -102290814 + L1MC3 LINE L1 7345 7598 -187 660 170 13 44 chr5 97339571 97339730 -102290420 + MLT1G LTR MaLR 431 584 -6 1747 194 15 44 chr5 97340637 97341045 -102289105 + MSTD LTR MaLR 1 396 0 811 224 31 78 chr5 97341427 97341749 -102288401 - MER77 LTR ERV1 -6 599 342 468 173 0 0 chr5 97341753 97341828 -102288322 + MER75 DNA T2_type 1 75 -439 1751 117 94 19 chr5 97341828 97342137 -102288013 + THE1B LTR MaLR 1 332 -32 10322 97 14 1 chr5 97342137 97343612 -102286538 + THE1B-int LTR MaLR 88 1580 0 2060 140 76 12 chr5 97343612 97343954 -102286196 + THE1B LTR MaLR 1 364 0 2854 96 14 2 chr5 97343954 97344391 -102285759 + MER75 DNA T2_type 71 512 -2 1642 308 161 14 chr5 97345303 97346104 -102284046 + L2 LINE L2 1913 2831 -483 2391 176 21 17 chr5 97346337 97346802 -102283348 - MLT1C LTR MaLR 0 467 1 1824 146 25 56 chr5 97347194 97347516 -102282634 + AluJb SINE Alu 1 312 0 1644 232 98 33 chr5 97347610 97347776 -102282374 + L1MCa LINE L1 28 182 -6244 2182 174 54 7 chr5 97347776 97348185 -102281965 - MSTA LTR MaLR 0 428 1 9490 146 22 24 chr5 97348185 97348309 -102281841 - MSTA-int LTR MaLR 0 1651 1528 1778 155 0 0 chr5 97348309 97348561 -102281589 + AluSx SINE Alu 4 255 -57 9490 146 22 24 chr5 97348561 97350090 -102280060 - MSTA-int LTR MaLR -123 1528 1 2047 158 70 32 chr5 97350090 97350502 -102279648 - MSTA LTR MaLR 0 428 1 1644 232 98 33 chr5 97350502 97350884 -102279266 + L1MCa LINE L1 181 614 -5812 1105 176 11 39 chr5 97350894 97351173 -102278977 + L1MCa LINE L1 962 1232 -5194 840 204 27 11 chr5 97351175 97351361 -102278789 + AluSg/x SINE Alu 122 310 0 2533 197 149 14 chr5 97351362 97352293 -102277857 + L1MCa LINE L1 1239 2397 -4210 191 271 24 0 chr5 97352309 97352394 -102277756 + GA-rich Low_complexity Low_complexity 2 88 0 2608 20 26 0 chr5 97352458 97352761 -102277389 - AluYa5 SINE Alu 0 311 1 642 211 0 63 chr5 97353359 97353534 -102276616 + MER58B DNA MER1_type 172 335 -6 704 286 85 9 chr5 97353871 97354095 -102276055 + MIR SINE MIR 21 261 -1 721 265 5 16 chr5 97354420 97354605 -102275545 + MIR SINE MIR 35 217 -45 180 111 0 0 chr5 97354782 97354809 -102275341 + (TATATG)n Simple_repeat Simple_repeat 1 27 0 433 188 11 34 chr5 97355558 97355734 -102274416 + (TA)n Simple_repeat Simple_repeat 2 173 0 350 161 39 26 chr5 97355751 97355906 -102274244 + (TA)n Simple_repeat Simple_repeat 1 157 0 1489 186 49 25 chr5 97357491 97357776 -102272374 - AluJo SINE Alu -20 292 1 181 294 59 0 chr5 97359267 97359318 -102270832 - L2 LINE L2 -2 3270 3217 7524 105 15 9 chr5 97359318 97359599 -102270551 + L1MA1 LINE L1 4572 4850 -1479 2268 95 0 3 chr5 97359599 97359895 -102270255 - AluY SINE Alu -16 295 1 7524 105 15 9 chr5 97359895 97361366 -102268784 + L1MA1 LINE L1 4850 6329 0 2251 70 0 0 chr5 97361688 97361959 -102268191 - AluSx SINE Alu -9 303 33 200 234 62 0 chr5 97362524 97362588 -102267562 - L3b LINE CR1 -391 1192 1125 305 202 40 0 chr5 97363206 97363305 -102266845 + (TA)n Simple_repeat Simple_repeat 1 103 0 1953 126 49 0 chr5 97364483 97364768 -102265382 + AluSx SINE Alu 1 299 -13 632 255 189 19 chr5 97364962 97365174 -102264976 - MIR SINE MIR 0 262 15 2009 73 0 0 chr5 97365239 97365523 -102264627 + AluY SINE Alu 39 322 0 210 196 65 0 chr5 97365917 97365963 -102264187 - MIR SINE MIR -79 129 81 2230 107 54 25 chr5 97366256 97366610 -102263540 + THE1B LTR MaLR 1 364 0 597 272 0 0 chr5 97366651 97366776 -102263374 + L2 LINE L2 3187 3311 -2 388 279 218 0 chr5 97367295 97367442 -102262708 - MIR3 SINE MIR -1 207 29 642 170 116 34 chr5 97367620 97367767 -102262383 - MLT1F LTR MaLR -1 541 383 482 254 52 40 chr5 97367990 97368163 -102261987 + MIR SINE MIR 81 255 -7 29 84 0 0 chr5 97368206 97368277 -102261873 + AT_rich Low_complexity Low_complexity 1 71 0 1149 270 104 62 chr5 97368494 97368976 -102261174 - MLT1G LTR MaLR -93 502 1 24 0 0 0 chr5 97369553 97369577 -102260573 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 97371185 97371207 -102258943 + AT_rich Low_complexity Low_complexity 1 22 0 1809 165 62 65 chr5 97371226 97371644 -102258506 + MSTB1 LTR MaLR 16 432 0 448 287 23 40 chr5 97372993 97373167 -102256983 - L2 LINE L2 -12 3301 3131 585 292 126 35 chr5 97373170 97373653 -102256497 - L1M4 LINE L1 -1645 4501 3975 338 277 72 36 chr5 97373694 97373889 -102256261 - HAL1b LINE L1 -685 663 462 2184 259 61 23 chr5 97373889 97374662 -102255488 + L1MC3 LINE L1 5540 6341 -1444 4273 199 79 14 chr5 97374699 97375790 -102254360 + L1MC4a LINE L1 6609 7770 -38 368 256 41 70 chr5 97375776 97375948 -102254202 - HAL1b LINE L1 -855 493 327 * 1600 208 0 0 chr5 97377444 97377756 -102252394 - AluSx SINE Alu 0 312 1 2201 131 0 0 chr5 97378461 97378773 -102251377 - AluSx SINE Alu 0 312 1 195 318 93 39 chr5 97378971 97379100 -102251050 + L2 LINE L2 3137 3272 0 481 160 13 0 chr5 97379502 97379577 -102250573 + MER21B LTR ERV1 12 87 -776 3018 204 65 60 chr5 97379612 97380381 -102249769 + MER21B LTR ERV1 22 794 -69 189 195 0 0 chr5 97380904 97380945 -102249205 + (CATATA)n Simple_repeat Simple_repeat 4 44 0 400 209 46 78 chr5 97381115 97381268 -102248882 - MLT1H LTR MaLR 0 549 402 225 81 0 27 chr5 97381371 97381408 -102248742 - MLT1H LTR MaLR -395 154 119 360 348 146 0 chr5 97381994 97382158 -102247992 + MIR SINE MIR 20 207 -55 735 234 76 15 chr5 97382186 97382383 -102247767 - MER46C DNA MER2_type -6 332 124 22 0 0 0 chr5 97382474 97382496 -102247654 + AT_rich Low_complexity Low_complexity 1 22 0 2412 74 3 6 chr5 97383627 97383939 -102246211 - AluY SINE Alu 0 311 1 1474 217 36 19 chr5 97384098 97384457 -102245693 + MLT1A1 LTR MaLR 1 365 0 4055 229 42 25 chr5 97384637 97386525 -102243625 - L1ME1 LINE L1 -137 6029 4118 1279 79 0 0 chr5 97386525 97386721 -102243429 - AluY SINE Alu 0 314 119 673 221 168 8 chr5 97386731 97386975 -102243175 - L1ME1 LINE L1 -2019 4127 3845 861 212 57 0 chr5 97389576 97389769 -102240381 - MIR SINE MIR -58 204 1 1003 253 29 4 chr5 97389799 97390040 -102240110 - MIR SINE MIR -2 260 14 187 284 122 52 chr5 97390421 97390692 -102239458 + L2 LINE L2 1987 2276 -1038 431 328 59 10 chr5 97391133 97391344 -102238806 - MIR SINE MIR -28 234 15 23 0 0 0 chr5 97391589 97391612 -102238538 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 97391869 97391894 -102238256 + AT_rich Low_complexity Low_complexity 1 25 0 983 284 109 16 chr5 97392111 97392559 -102237591 + LTR16C LTR ERVL 2 491 0 5822 168 15 6 chr5 97392674 97394641 -102235509 - L1PA15 LINE L1 0 6816 4833 2243 50 10 27 chr5 97394685 97394984 -102235166 + L1PA8 LINE L1 5864 6157 -15 3134 216 25 7 chr5 97395013 97395704 -102234446 - L1PA15 LINE L1 -4749 2038 1336 2293 307 20 38 chr5 97395904 97396719 -102233431 - L1PA15 LINE L1 -5987 800 1 357 24 0 0 chr5 97397162 97397204 -102232946 + (TA)n Simple_repeat Simple_repeat 2 43 0 222 221 33 33 chr5 97397425 97397547 -102232603 + (TATAA)n Simple_repeat Simple_repeat 5 126 0 827 222 0 0 chr5 97397637 97397790 -102232360 - AluJb SINE Alu -28 284 132 298 177 0 22 chr5 97397822 97397927 -102232223 - FLAM_A SINE Alu -2 131 1 2779 132 26 15 chr5 97397927 97398383 -102231767 - MER31A LTR ERV1 -21 464 4 584 347 161 53 chr5 97401002 97401482 -102228668 - HAL1b LINE L1 -73 1275 848 324 0 0 0 chr5 97401482 97401518 -102228632 + (TA)n Simple_repeat Simple_repeat 2 37 0 584 347 161 53 chr5 97401518 97401618 -102228532 - HAL1b LINE L1 -500 848 760 2126 72 40 4 chr5 97401618 97401894 -102228256 - AluY SINE Alu -25 286 1 584 347 161 53 chr5 97401894 97402369 -102227781 - HAL1b LINE L1 -588 760 105 480 279 69 92 chr5 97404697 97405088 -102225062 - L2 LINE L2 -4 3268 2887 531 297 16 38 chr5 97405184 97405369 -102224781 - MER5A DNA MER1_type -2 187 7 1623 260 70 30 chr5 97408727 97409224 -102220926 - LTR40a LTR ERVL -2 517 1 554 255 32 19 chr5 97409252 97409409 -102220741 - MIR SINE MIR -15 247 89 452 323 100 79 chr5 97409458 97410310 -102219840 + L2 LINE L2 2365 3239 -33 789 149 8 15 chr5 97410326 97410460 -102219690 - FLAM_C SINE Alu 0 133 1 246 315 49 7 chr5 97411960 97412103 -102218047 + L2 LINE L2 1932 2080 -1234 473 341 97 35 chr5 97414514 97414886 -102215264 + L2 LINE L2 2869 3263 -9 1016 98 13 26 chr5 97415331 97415484 -102214666 - MER1B DNA MER1_type -4 329 179 1413 175 22 0 chr5 97415525 97415754 -102214396 - MER1B DNA MER1_type -63 234 1 6654 132 39 21 chr5 97415805 97417014 -102213136 - Tigger3b DNA MER2_type 0 1231 2 203 279 0 0 chr5 97418394 97418437 -102211713 - L3 LINE CR1 -14 1563 1521 1139 169 84 11 chr5 97419148 97419409 -102210741 - L1MA9 LINE L1 -38 6274 5995 205 254 36 130 chr5 97419547 97419685 -102210465 - MIR3 SINE MIR -70 138 14 2204 115 3 10 chr5 97420352 97420701 -102209449 - AluSx SINE Alu 0 347 1 1510 206 22 19 chr5 97421721 97422085 -102208065 + MLT1A1 LTR MaLR 1 365 0 4200 53 1 3 chr5 97422136 97422967 -102207183 + L1PA6 LINE L1 4958 5787 -367 7714 23 0 0 chr5 97422967 97423863 -102206287 + L1PA3 LINE L1 5255 6152 -3 2793 69 24 3 chr5 97423906 97424282 -102205868 + L1PA6 LINE L1 5770 6153 -1 442 235 143 36 chr5 97424511 97424707 -102205443 - HAL1 LINE L1 -6 2501 2285 395 258 0 11 chr5 97424846 97424939 -102205211 - MLT1J LTR MaLR -310 201 110 1656 226 144 97 chr5 97425385 97426554 -102203596 - HAL1 LINE L1 -696 1811 588 338 278 122 61 chr5 97426700 97426945 -102203205 - HAL1 LINE L1 -2197 310 51 261 280 84 21 chr5 97428009 97428152 -102201998 + L1ME LINE L1 5672 5823 -298 26 50 0 0 chr5 97429316 97429356 -102200794 + AT_rich Low_complexity Low_complexity 1 40 0 14976 123 16 26 chr5 97430169 97430389 -102199761 + Tigger1 DNA MER2_type 2 223 -2195 2664 26 0 16 chr5 97430389 97430702 -102199448 + AluY SINE Alu 1 308 -3 14976 123 16 26 chr5 97430702 97430761 -102199389 + Tigger1 DNA MER2_type 223 281 -2137 2421 161 26 2 chr5 97430761 97431177 -102198973 - MSTB LTR MaLR 0 426 1 14976 123 16 26 chr5 97431177 97433336 -102196814 + Tigger1 DNA MER2_type 281 2417 -1 306 67 0 0 chr5 97433348 97433393 -102196757 + (TG)n Simple_repeat Simple_repeat 2 46 0 198 336 9 36 chr5 97433699 97433809 -102196341 - L2 LINE L2 -352 2961 2855 269 271 0 0 chr5 97434285 97434344 -102195806 + L1ME2 LINE L1 6087 6145 -19 234 254 71 91 chr5 97434398 97434595 -102195555 + L1MC4 LINE L1 7832 8024 -18 183 80 0 0 chr5 97435029 97435054 -102195096 + (TC)n Simple_repeat Simple_repeat 2 26 0 476 121 0 12 chr5 97438804 97438887 -102191263 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 1857 127 22 0 chr5 97438910 97439177 -102190973 - AluSx SINE Alu -39 273 1 734 256 63 5 chr5 97439264 97439471 -102190679 + MIR SINE MIR 43 261 -1 353 228 282 34 chr5 97439600 97439806 -102190344 + MIR SINE MIR 4 260 -2 1481 173 11 27 chr5 97440611 97440871 -102189279 - AluJo SINE Alu -33 279 24 351 245 182 28 chr5 97440872 97441015 -102189135 + MIR SINE MIR 56 220 -42 245 224 17 0 chr5 97441751 97441809 -102188341 + CT-rich Low_complexity Low_complexity 3 61 0 539 242 0 27 chr5 97442984 97443129 -102187021 - MIR SINE MIR -67 141 3 207 292 58 123 chr5 97443759 97443930 -102186220 + L2 LINE L2 3015 3174 -98 374 153 28 0 chr5 97445141 97445213 -102184937 - MER116 DNA Mariner -6 74 1 780 298 82 93 chr5 97445604 97445677 -102184473 + L2 LINE L2 2832 2904 -409 577 225 166 0 chr5 97445677 97445828 -102184322 - MER45A DNA AcHobo -2 176 1 780 298 82 93 chr5 97445828 97446240 -102183910 + L2 LINE L2 2904 3312 -1 183 235 0 0 chr5 97448674 97448725 -102181425 + (TA)n Simple_repeat Simple_repeat 1 51 0 266 296 14 0 chr5 97450546 97450617 -102179533 + tRNA-Ile-ATT tRNA tRNA 3 74 -3 399 296 46 45 chr5 97450900 97451056 -102179094 - MIR SINE MIR -63 145 28 22 0 0 0 chr5 97451847 97451869 -102178281 + AT_rich Low_complexity Low_complexity 1 22 0 1931 166 19 3 chr5 97451966 97452273 -102177877 - AluJb SINE Alu 0 312 1 208 409 63 0 chr5 97453362 97453521 -102176629 + L3b LINE CR1 1402 1570 -13 182 381 38 9 chr5 97453853 97453958 -102176192 + MER5A DNA MER1_type 38 145 -44 21 71 0 0 chr5 97456033 97456075 -102174075 + AT_rich Low_complexity Low_complexity 1 42 0 29 0 0 0 chr5 97456103 97456132 -102174018 + AT_rich Low_complexity Low_complexity 1 29 0 1725 158 7 14 chr5 97457280 97457572 -102172578 + AluJo SINE Alu 1 290 -22 21 0 0 0 chr5 97457865 97457886 -102172264 + AT_rich Low_complexity Low_complexity 1 21 0 397 326 122 31 chr5 97457888 97458207 -102171943 + L2 LINE L2 2361 2708 -606 793 278 126 44 chr5 97458271 97458972 -102171178 + L1MC4a LINE L1 5173 5403 -743 235 385 20 14 chr5 97459699 97459847 -102170303 + L2 LINE L2 2130 2278 -1036 362 346 41 82 chr5 97460182 97460670 -102169480 + L2 LINE L2 2805 3272 0 2014 136 7 0 chr5 97461046 97461340 -102168810 - AluSx SINE Alu -14 298 3 354 162 68 0 chr5 97461364 97461438 -102168712 + MER116 DNA Mariner 2 80 0 6216 165 90 18 chr5 97461534 97461776 -102168374 + Charlie1a DNA MER1_type 1 224 -2537 2267 93 0 20 chr5 97461776 97462099 -102168051 + AluSx SINE Alu 1 312 0 6216 165 90 18 chr5 97462099 97463212 -102166938 + Charlie1a DNA MER1_type 224 1454 -1 308 336 22 7 chr5 97463472 97463609 -102166541 - L2 LINE L2 -1984 1330 1192 236 200 100 0 chr5 97465179 97465229 -102164921 + L2 LINE L2 3258 3312 -1 180 340 0 0 chr5 97465287 97465340 -102164810 - L2 LINE L2 -5 3308 3256 2081 75 35 23 chr5 97465447 97465792 -102164358 + L1MA3 LINE L1 3314 3662 -3903 * 2999 185 30 0 chr5 97465785 97466417 -102163733 + L1MA3 LINE L1 4269 4919 -2646 1561 183 10 0 chr5 97466411 97466701 -102163449 + L1MA3 LINE L1 6115 6407 -1158 * 1560 191 53 5 chr5 97467348 97467725 -102162425 + L1MA3 LINE L1 6368 6762 -803 2218 122 3 0 chr5 97467725 97468029 -102162121 + AluSx SINE Alu 1 305 -7 4900 85 3 29 chr5 97468030 97468756 -102161394 + L1MA3 LINE L1 7018 7724 0 403 167 0 0 chr5 97469051 97469117 -102161033 - MLT1K LTR MaLR -355 233 168 314 295 0 0 chr5 97469144 97469222 -102160928 + L2 LINE L2 3169 3246 -26 1049 224 11 24 chr5 97469285 97469536 -102160614 + MIR SINE MIR 10 261 -1 902 219 0 0 chr5 97469658 97469841 -102160309 - L1PA16 LINE L1 -9 6157 5975 262 244 213 8 chr5 97469947 97470074 -102160076 + MIR SINE MIR 110 262 0 200 381 48 0 chr5 97470394 97470520 -102159630 + L3b LINE CR1 1366 1497 -86 249 252 99 45 chr5 97470686 97470797 -102159353 - L2 LINE L2 0 3313 3197 388 266 55 39 chr5 97471118 97471246 -102158904 - MLT1K LTR MaLR -332 256 127 254 189 0 19 chr5 97471796 97471849 -102158301 + L2 LINE L2 3262 3313 0 21 0 0 0 chr5 97472223 97472244 -102157906 + AT_rich Low_complexity Low_complexity 1 21 0 33 25 0 0 chr5 97472959 97472999 -102157151 + AT_rich Low_complexity Low_complexity 1 40 0 7021 54 4 11 chr5 97473507 97474551 -102155599 + L1PA8 LINE L1 5134 6171 -1 290 280 7 35 chr5 97475796 97475939 -102154211 + CT-rich Low_complexity Low_complexity 1 139 0 528 354 104 48 chr5 97475940 97476256 -102153894 - L2 LINE L2 -22 3250 2917 334 329 0 32 chr5 97476311 97476466 -102153684 - L2 LINE L2 -584 2730 2581 233 271 0 17 chr5 97476494 97476553 -102153597 - MIR SINE MIR -135 73 16 396 0 0 0 chr5 97477456 97477500 -102152650 + (CA)n Simple_repeat Simple_repeat 2 45 0 570 282 37 6 chr5 97477639 97477802 -102152348 + MER5B DNA MER1_type 1 168 -10 1063 147 57 19 chr5 97477820 97478031 -102152119 - MER20 DNA MER1_type 0 219 1 390 279 107 13 chr5 97478528 97478761 -102151389 + L1M4 LINE L1 4592 4846 -1300 369 296 21 4 chr5 97479521 97479641 -102150509 - MIR SINE MIR -64 144 32 22 35 0 0 chr5 97480347 97480376 -102149774 + AT_rich Low_complexity Low_complexity 1 29 0 590 250 0 8 chr5 97481450 97481574 -102148576 + L2 LINE L2 3191 3313 0 244 337 163 0 chr5 97482680 97482778 -102147372 + L2 LINE L2 3181 3294 -19 1250 192 9 0 chr5 97482799 97483023 -102147127 - AluJo SINE Alu -3 309 84 523 265 108 27 chr5 97483257 97483442 -102146708 + MIR SINE MIR 63 262 0 26 0 0 0 chr5 97484622 97484648 -102145502 + AT_rich Low_complexity Low_complexity 1 26 0 2186 113 3 0 chr5 97485509 97485809 -102144341 + AluSx SINE Alu 1 301 -11 252 86 0 0 chr5 97485921 97485956 -102144194 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 849 191 6 42 chr5 97486013 97486181 -102143969 + AluJo SINE Alu 1 162 -150 31682 106 13 56 chr5 97486401 97490701 -102139449 - L1PA7 LINE L1 -11 6143 2218 2066 122 28 0 chr5 97490701 97490989 -102139161 + AluSg SINE Alu 1 296 -14 31682 106 13 56 chr5 97490989 97493105 -102137045 - L1PA7 LINE L1 -3936 2218 12 2355 195 17 31 chr5 97493114 97493657 -102136493 + MER97b DNA MER1_type? 75 609 -444 2104 133 0 0 chr5 97493827 97494150 -102136000 - AluSx SINE Alu 0 324 2 233 186 18 150 chr5 97494152 97494221 -102135929 + MER97b DNA MER1_type? 936 986 -67 2182 103 0 10 chr5 97494221 97494513 -102135637 + AluSg SINE Alu 2 290 -20 233 186 18 150 chr5 97494513 97494556 -102135594 + MER97b DNA MER1_type? 986 1033 -20 183 42 0 0 chr5 97495466 97495490 -102134660 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1618 157 22 15 chr5 97495492 97495760 -102134390 - AluJo SINE Alu -32 280 11 24 0 0 0 chr5 97496410 97496434 -102133716 + AT_rich Low_complexity Low_complexity 1 24 0 24 77 0 0 chr5 97496658 97496710 -102133440 + AT_rich Low_complexity Low_complexity 1 52 0 36 0 0 0 chr5 97497631 97497667 -102132483 + AT_rich Low_complexity Low_complexity 1 36 0 240 377 69 15 chr5 97497683 97497813 -102132337 - L2 LINE L2 0 3272 3136 28 29 0 0 chr5 97500951 97500986 -102129164 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 97501464 97501486 -102128664 + AT_rich Low_complexity Low_complexity 1 22 0 208 386 7 29 chr5 97503142 97503282 -102126868 + MER5A DNA MER1_type 43 179 -10 199 319 0 14 chr5 97503718 97503787 -102126363 + L2 LINE L2 2780 2847 -467 193 284 147 21 chr5 97504424 97504519 -102125631 - L2 LINE L2 -8 3264 3158 180 308 77 15 chr5 97504587 97504652 -102125498 - L2 LINE L2 -55 3217 3149 180 0 0 0 chr5 97504924 97504944 -102125206 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 184 331 118 24 chr5 97505262 97505389 -102124761 + L2 LINE L2 3133 3271 -1 207 269 118 34 chr5 97505443 97505562 -102124588 - L2 LINE L2 -65 3248 3120 204 53 18 88 chr5 97507471 97507528 -102122622 + (TTTTTG)n Simple_repeat Simple_repeat 1 53 0 22 0 0 0 chr5 97509330 97509352 -102120798 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr5 97513015 97513051 -102117099 + AT_rich Low_complexity Low_complexity 1 36 0 272 325 117 15 chr5 97513827 97514024 -102116126 + MIR SINE MIR 2 218 -44 21 57 0 0 chr5 97514186 97514221 -102115929 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 97514228 97514256 -102115894 + AT_rich Low_complexity Low_complexity 1 28 0 1894 286 137 16 chr5 97515430 97516449 -102113701 + L2 LINE L2 1978 3168 -145 2150 81 24 65 chr5 97516449 97516820 -102113330 - L1MA4A LINE L1 -6 6297 5942 1894 286 137 16 chr5 97516820 97516978 -102113172 + L2 LINE L2 3168 3306 -7 21 36 0 0 chr5 97517569 97517597 -102112553 + AT_rich Low_complexity Low_complexity 1 28 0 675 301 142 0 chr5 97517607 97517826 -102112324 - MIR SINE MIR -3 259 10 34 0 0 0 chr5 97518830 97518864 -102111286 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr5 97519811 97519833 -102110317 + AT_rich Low_complexity Low_complexity 1 22 0 2291 89 0 0 chr5 97523980 97524271 -102105879 + AluSc SINE Alu 1 291 -18 635 279 39 22 chr5 97525450 97525762 -102104388 + HAL1b LINE L1 70 386 -962 243 283 30 76 chr5 97525796 97525994 -102104156 + L1MDa LINE L1 17 205 -6335 1249 182 35 3 chr5 97526052 97526395 -102103755 + L1MA4A LINE L1 5861 6275 -25 2555 237 84 68 chr5 97526422 97527107 -102103043 + L1M4 LINE L1 2570 3242 -2904 1935 136 13 10 chr5 97527107 97527408 -102102742 + AluSq SINE Alu 1 302 -11 2555 237 84 68 chr5 97527408 97528097 -102102053 + L1M4 LINE L1 3242 3967 -2179 2177 105 3 46 chr5 97528119 97528444 -102101706 + AluSx SINE Alu 1 311 -1 6610 71 1 1 chr5 97528484 97529980 -102100170 - L1PA7 LINE L1 0 6154 4656 2744 86 0 3 chr5 97529980 97530362 -102099788 + L1PA7 LINE L1 4265 4645 -1501 863 285 15 8 chr5 97530340 97530607 -102099543 + L1M4 LINE L1 3971 4239 -1907 * 2095 130 0 10 chr5 97530732 97531039 -102099111 - AluSx SINE Alu -8 304 1 255 312 18 9 chr5 97531480 97531589 -102098561 - L1M4 LINE L1 -1539 4607 4498 925 107 0 0 chr5 97532343 97532465 -102097685 + AluSq/x SINE Alu 1 122 -191 4929 57 0 3 chr5 97532517 97533137 -102097013 - L1PA7 LINE L1 -2 6152 5535 500 196 0 0 chr5 97533137 97533234 -102096916 + L1ME3A LINE L1 2676 2772 -3374 500 230 244 19 chr5 97533227 97533436 -102096714 + L1ME1 LINE L1 5790 6045 -121 525 321 138 35 chr5 97533901 97534421 -102095729 - L2 LINE L2 -338 2976 2403 1604 146 27 82 chr5 97534726 97535055 -102095095 + MER7A DNA MER2_type 5 313 -33 1661 161 90 6 chr5 97536363 97536674 -102093476 + MER2 DNA MER2_type 1 337 -8 22 0 0 0 chr5 97537069 97537091 -102093059 + AT_rich Low_complexity Low_complexity 1 22 0 191 35 0 35 chr5 97537676 97537705 -102092445 + (CAT)n Simple_repeat Simple_repeat 3 30 0 2318 74 0 10 chr5 97538167 97538466 -102091684 + AluY SINE Alu 1 296 -15 418 277 99 69 chr5 97538941 97539518 -102090632 + L1ME3A LINE L1 4055 4648 -1498 * 1532 244 110 72 chr5 97539513 97539664 -102090486 + L1ME3A LINE L1 5055 5199 -971 2218 95 3 0 chr5 97539664 97539968 -102090182 + AluY SINE Alu 1 305 -6 1532 244 110 72 chr5 97539968 97540654 -102089496 + L1ME3A LINE L1 5199 5940 -230 3577 157 39 17 chr5 97540654 97541344 -102088806 + L1MB3 LINE L1 5479 6183 0 1532 244 110 72 chr5 97541344 97541585 -102088565 + L1ME3A LINE L1 5940 6170 0 279 366 81 23 chr5 97541705 97541926 -102088224 + MIR SINE MIR 29 262 0 1940 165 98 33 chr5 97541974 97542434 -102087716 - LTR2B LTR ERV1 0 490 1 14422 186 35 49 chr5 97542645 97547142 -102083008 + L1PB1 LINE L1 91 4648 -2219 925 110 0 0 chr5 97547142 97547269 -102082881 - AluSp/q SINE Alu -13 300 174 14422 186 35 49 chr5 97547269 97547588 -102082562 + L1PB1 LINE L1 4648 4970 -1897 180 0 0 0 chr5 97547588 97547608 -102082542 + (CAA)n Simple_repeat Simple_repeat 2 21 0 14422 186 35 49 chr5 97547608 97549339 -102080811 + L1PB1 LINE L1 4970 6867 0 28 29 0 0 chr5 97550630 97550665 -102079485 + AT_rich Low_complexity Low_complexity 1 35 0 5134 110 21 18 chr5 97551057 97551829 -102078321 - MER4E LTR ERV1 -5 774 1 360 241 213 0 chr5 97552203 97552311 -102077839 - MER5A DNA MER1_type 0 189 59 2341 61 3 16 chr5 97552581 97552891 -102077259 + AluY SINE Alu 1 306 -5 2346 80 0 3 chr5 97552977 97553278 -102076872 - AluSc SINE Alu -9 300 1 611 229 59 35 chr5 97555398 97555568 -102074582 - MER5B DNA MER1_type -1 177 4 785 167 0 8 chr5 97555730 97555862 -102074288 + FLAM_C SINE Alu 1 131 -2 191 320 186 13 chr5 97555879 97556035 -102074115 + MIR3 SINE MIR 19 201 -7 231 325 12 24 chr5 97556124 97556207 -102073943 - MER117 DNA MER1_type -1 196 115 4053 104 44 10 chr5 97556602 97557216 -102072934 + MER41B LTR ERV1 1 635 0 291 340 50 0 chr5 97558831 97558931 -102071219 + L2 LINE L2 3136 3240 -32 1362 172 95 26 chr5 97559765 97560038 -102070112 + AluJo SINE Alu 3 294 -18 234 256 70 35 chr5 97560183 97560269 -102069881 - L2 LINE L2 -47 3225 3137 2303 54 0 4 chr5 97560540 97560816 -102069334 - AluY SINE Alu -11 300 26 2474 146 59 83 chr5 97560888 97561513 -102068637 + LTR9 LTR ERV1 3 612 0 4245 130 4 59 chr5 97561721 97562452 -102067698 + LTR8 LTR ERV1 1 691 0 259 331 16 25 chr5 97562735 97562856 -102067294 - MIR SINE MIR 0 262 143 3045 83 17 3 chr5 97562858 97563375 -102066775 - LTR10C LTR ERV1 0 591 1 2117 93 0 4 chr5 97563394 97563674 -102066476 + AluSq SINE Alu 21 299 -14 270 200 39 85 chr5 97564016 97564146 -102066004 + L1ME LINE L1 5696 5819 -302 1583 184 0 4 chr5 97564372 97564633 -102065517 - AluJb SINE Alu -52 260 1 1491 193 38 0 chr5 97565045 97565310 -102064840 + AluJb SINE Alu 1 275 -37 31 0 0 0 chr5 97565315 97565346 -102064804 + AT_rich Low_complexity Low_complexity 1 31 0 248 239 75 0 chr5 97565553 97565620 -102064530 + Charlie8 DNA MER1_type 2346 2417 0 373 278 186 38 chr5 97565753 97566044 -102064106 + HAL1 LINE L1 1220 1553 -954 1386 236 171 8 chr5 97566093 97566571 -102063579 + L1ME1 LINE L1 5582 6137 -29 25 0 0 0 chr5 97566652 97566677 -102063473 + AT_rich Low_complexity Low_complexity 1 25 0 2112 87 0 14 chr5 97566784 97567101 -102063049 + AluY SINE Alu 1 313 0 29 0 0 0 chr5 97567288 97567317 -102062833 + AT_rich Low_complexity Low_complexity 1 29 0 2432 109 11 19 chr5 97567520 97567896 -102062254 - THE1C LTR MaLR -2 373 1 9904 106 39 42 chr5 97567896 97569481 -102060669 - THE1C-int LTR MaLR 0 1580 1 437 114 29 0 chr5 97569481 97569551 -102060599 - THE1C LTR MaLR 0 375 304 2146 87 62 13 chr5 97569591 97569900 -102060250 - THE1C LTR MaLR -50 325 2 24 53 0 0 chr5 97569956 97569994 -102060156 + AT_rich Low_complexity Low_complexity 1 38 0 1376 272 50 41 chr5 97570619 97571078 -102059072 + LTR16B LTR ERVL 1 463 -1 2231 114 7 0 chr5 97571183 97571490 -102058660 - AluY SINE Alu -2 309 1 436 246 54 39 chr5 97572203 97572333 -102057817 + MIR SINE MIR 111 242 -20 252 0 0 0 chr5 97572769 97572797 -102057353 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 6062 114 17 5 chr5 97574267 97576001 -102054149 - L1PA15 LINE L1 -10 6155 4406 2462 84 0 0 chr5 97576001 97576312 -102053838 - AluY SINE Alu 0 311 1 729 320 117 18 chr5 97576565 97577018 -102053132 - L2 LINE L2 0 3313 2816 1159 233 55 21 chr5 97577473 97577799 -102052351 - MER2 DNA MER2_type -8 337 1 23 0 0 0 chr5 97577882 97577905 -102052245 + AT_rich Low_complexity Low_complexity 1 23 0 336 64 0 0 chr5 97579946 97579993 -102050157 + (TG)n Simple_repeat Simple_repeat 2 48 0 186 43 0 0 chr5 97580459 97580482 -102049668 + (CA)n Simple_repeat Simple_repeat 2 24 0 23 33 0 0 chr5 97580829 97580859 -102049291 + AT_rich Low_complexity Low_complexity 1 30 0 364 204 112 20 chr5 97583452 97583550 -102046600 + MER5A DNA MER1_type 3 109 -80 2304 100 7 3 chr5 97583570 97583871 -102046279 + AluSx SINE Alu 1 302 -10 2277 121 0 29 chr5 97584168 97584515 -102045635 - MER1B DNA MER1_type 0 337 1 2943 143 9 4 chr5 97585143 97585603 -102044547 + LTR32 LTR ERVL 10 471 0 245 342 0 13 chr5 97586445 97586524 -102043626 + 7SK RNA RNA 1 78 -115 2251 93 7 17 chr5 97590007 97590309 -102039841 - AluSq SINE Alu -14 299 1 353 299 199 10 chr5 97591207 97591408 -102038742 - MIR SINE MIR -21 241 3 458 270 170 43 chr5 97593066 97593142 -102037008 + L2 LINE L2 2976 3041 -272 194 33 67 0 chr5 97593142 97593172 -102036978 + (CATCT)n Simple_repeat Simple_repeat 1 32 0 458 270 170 43 chr5 97593172 97593395 -102036755 + L2 LINE L2 3041 3313 0 1093 158 112 0 chr5 97593749 97593945 -102036205 - MER20 DNA MER1_type 0 219 2 408 200 0 0 chr5 97594102 97594192 -102035958 + CT-rich Low_complexity Low_complexity 4 93 0 196 264 35 46 chr5 97594763 97594850 -102035300 + L2 LINE L2 3134 3219 -94 273 273 57 11 chr5 97595213 97595301 -102034849 + MIR SINE MIR 161 252 -10 1700 239 91 9 chr5 97595938 97596520 -102033630 - Charlie7 DNA MER1_type -97 2515 1886 2951 260 81 42 chr5 97596539 97597847 -102032303 - Charlie7 DNA MER1_type -1138 1474 116 270 190 0 69 chr5 97597964 97598022 -102032128 + L2 LINE L2 3217 3270 -2 400 260 37 40 chr5 97600119 97600392 -102029758 + L1ME LINE L1 5515 5822 -299 239 133 22 0 chr5 97600529 97600574 -102029576 + CT-rich Low_complexity Low_complexity 3 48 0 24 32 0 0 chr5 97600784 97600815 -102029335 + AT_rich Low_complexity Low_complexity 1 31 0 282 209 0 162 chr5 97600958 97601063 -102029087 + MIR3 SINE MIR 116 203 -5 22 35 0 0 chr5 97601532 97601561 -102028589 + AT_rich Low_complexity Low_complexity 1 29 0 2321 101 0 0 chr5 97602014 97602322 -102027828 - AluSc SINE Alu -1 308 1 2564 234 21 54 chr5 97602624 97603396 -102026754 + L1M4 LINE L1 16 761 -5781 2877 130 54 28 chr5 97603423 97603962 -102026188 + L1MB7 LINE L1 5624 6176 -8 873 255 52 0 chr5 97604034 97604246 -102025904 - MER58A DNA MER1_type 0 224 2 216 0 0 0 chr5 97604426 97604450 -102025700 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 2082 110 25 0 chr5 97604459 97604613 -102025537 - AluSq SINE Alu -25 288 122 243 0 0 0 chr5 97604613 97604640 -102025510 + (TG)n Simple_repeat Simple_repeat 2 28 0 2082 110 25 0 chr5 97604640 97604766 -102025384 - AluSq SINE Alu -191 122 1 3676 255 93 51 chr5 97605346 97607427 -102022723 + L1ME1 LINE L1 55 2222 -4174 3285 234 46 25 chr5 97607423 97607759 -102022391 + L1ME1 LINE L1 4856 5183 -1052 * 2202 110 0 0 chr5 97607759 97608051 -102022099 + AluSg SINE Alu 1 292 -18 3285 234 46 25 chr5 97608051 97608490 -102021660 + L1ME1 LINE L1 5183 5611 -624 2286 103 0 0 chr5 97608490 97608790 -102021360 - AluSc SINE Alu -9 300 1 3285 234 46 25 chr5 97608790 97608881 -102021269 + L1ME1 LINE L1 5611 5699 -536 932 167 109 113 chr5 97608881 97609048 -102021102 - MER8 DNA MER2_type -1 238 71 2155 106 24 0 chr5 97609048 97609341 -102020809 - AluSp SINE Alu -13 300 1 932 167 109 113 chr5 97609341 97609412 -102020738 - MER8 DNA MER2_type -168 71 1 3285 234 46 25 chr5 97609412 97609875 -102020275 + L1ME1 LINE L1 5699 6210 -25 2034 139 43 12 chr5 97610795 97611119 -102019031 + MER1B DNA MER1_type 4 337 0 184 368 13 0 chr5 97611164 97611240 -102018910 + MIR SINE MIR 72 148 -114 24 0 0 0 chr5 97613006 97613030 -102017120 + AT_rich Low_complexity Low_complexity 1 24 0 1107 241 105 58 chr5 97614591 97614973 -102015177 + MLT1K LTR MaLR 3 411 -65 1543 169 22 11 chr5 97614973 97615251 -102014899 - AluJo SINE Alu -16 296 16 1107 241 105 58 chr5 97615251 97615317 -102014833 + MLT1K LTR MaLR 411 472 -4 229 232 0 87 chr5 97615704 97615773 -102014377 - L2 LINE L2 -4 3309 3247 713 199 8 0 chr5 97615881 97616012 -102014138 - MER94 DNA DNA -2 132 1 393 272 19 10 chr5 97616359 97616462 -102013688 - MIR SINE MIR -86 176 73 209 176 0 0 chr5 97616817 97616851 -102013299 + GA-rich Low_complexity Low_complexity 3 36 0 237 132 0 0 chr5 97616890 97616928 -102013222 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 909 207 35 39 chr5 97617186 97617389 -102012761 - MER58A DNA MER1_type -2 222 21 1622 235 47 42 chr5 97618172 97618684 -102011466 + MER39 LTR ERV1 7 702 -5 736 208 127 6 chr5 97620139 97620312 -102009838 + MER39 LTR ERV1 411 604 -103 5333 188 55 7 chr5 97620312 97621538 -102008612 + L1 LINE L1 2680 3964 -2182 521 243 0 0 chr5 97621538 97621649 -102008501 + AluJo/FLAM SINE Alu 1 111 -201 302 143 0 0 chr5 97621650 97621731 -102008419 + Alu SINE Alu 241 321 0 1654 86 45 8 chr5 97621732 97621999 -102008151 - L1M1 LINE L1 -683 5620 5344 1164 200 41 0 chr5 97622000 97622102 -102008048 - AluJo SINE Alu -83 229 133 276 30 0 0 chr5 97622102 97622135 -102008015 + (TTA)n Simple_repeat Simple_repeat 3 35 0 1164 200 41 0 chr5 97622135 97622252 -102007898 - AluJo SINE Alu -179 133 1 3702 138 28 22 chr5 97622252 97622939 -102007211 + L1MA4A LINE L1 5607 6297 -6 389 202 29 19 chr5 97622963 97623067 -102007083 + MER39 LTR ERV1 598 702 -5 376 272 0 22 chr5 97623069 97623161 -102006989 + MER58B DNA MER1_type 252 341 0 1754 183 0 7 chr5 97623334 97623634 -102006516 + AluJo SINE Alu 2 299 -13 12800 155 51 14 chr5 97623787 97624225 -102005925 - L1PA15-16 LINE L1 -3552 3297 2876 459 0 0 0 chr5 97624225 97624276 -102005874 + (TG)n Simple_repeat Simple_repeat 2 52 0 12800 155 51 14 chr5 97624276 97626335 -102003815 - L1PA15-16 LINE L1 -3973 2876 780 306 260 39 0 chr5 97626335 97626412 -102003738 + L2 LINE L2 3234 3313 0 254 258 0 0 chr5 97626590 97626652 -102003498 + MIR SINE MIR 92 153 -109 411 284 47 14 chr5 97627243 97627391 -102002759 - MIR SINE MIR -6 256 104 510 316 115 58 chr5 97627486 97627834 -102002316 - L2 LINE L2 -37 3235 2868 225 206 151 14 chr5 97627824 97627897 -102002253 - MER91B DNA MER1_type -37 153 71 * 380 317 30 30 chr5 97627929 97628131 -102002019 - L2 LINE L2 -435 2879 2678 386 111 0 152 chr5 97628296 97628395 -102001755 + MER5A DNA MER1_type 26 109 -80 778 134 0 0 chr5 97628847 97628966 -102001184 + FLAM_C SINE Alu 23 141 -2 2263 69 22 0 chr5 97629103 97629407 -102000743 - AluY SINE Alu 0 311 2 746 232 107 11 chr5 97629633 97629841 -102000309 + MIR SINE MIR 12 236 -26 1731 206 47 13 chr5 97630637 97631020 -101999130 - MSTD LTR MaLR 0 396 1 6372 87 9 4 chr5 97631208 97633091 -101997059 - L1PA12 LINE L1 0 6168 4261 27 62 0 0 chr5 97633256 97633304 -101996846 + AT_rich Low_complexity Low_complexity 1 48 0 631 257 23 37 chr5 97634245 97634463 -101995687 + MIR SINE MIR 44 258 -4 207 125 0 0 chr5 97635683 97635723 -101994427 + (TC)n Simple_repeat Simple_repeat 2 41 0 444 214 93 104 chr5 97637253 97637435 -101992715 + MER5A DNA MER1_type 1 180 -9 1206 174 90 41 chr5 97637541 97637885 -101992265 + MLT1A1 LTR MaLR 5 365 0 219 321 167 6 chr5 97638856 97639024 -101991126 - L2 LINE L2 -407 2907 2713 195 42 0 0 chr5 97639419 97639443 -101990707 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 216 0 0 0 chr5 97639442 97639466 -101990684 + (CA)n Simple_repeat Simple_repeat 2 25 0 1154 351 28 36 chr5 97639953 97640780 -101989370 + HERVL LTR ERVL 4522 5341 -313 925 116 49 18 chr5 97640947 97641111 -101989039 - THE1C LTR MaLR 0 375 207 246 254 164 9 chr5 97641486 97641596 -101988554 - L2 LINE L2 -1272 2042 1916 943 321 109 56 chr5 97642287 97643585 -101986565 - L2 LINE L2 0 3313 1946 291 294 21 84 chr5 97643593 97643736 -101986414 + L2 LINE L2 3178 3311 -2 2268 97 0 3 chr5 97645879 97646169 -101983981 + AluSx SINE Alu 1 289 -23 284 303 26 13 chr5 97646184 97646336 -101983814 - L1ME4a LINE L1 -14 6107 5954 1087 196 128 45 chr5 97646487 97646824 -101983326 - MLT1A1 LTR MaLR 0 365 1 390 352 82 17 chr5 97646987 97647220 -101982930 + MIR SINE MIR 9 256 -6 610 303 56 17 chr5 97647248 97647582 -101982568 - L1ME4a LINE L1 -238 5883 5536 237 261 0 0 chr5 97648111 97648176 -101981974 + L1ME LINE L1 5629 5693 -428 1967 125 3 47 chr5 97649248 97649569 -101980581 - AluSx SINE Alu -5 307 1 41 21 0 0 chr5 97649983 97650031 -101980119 + AT_rich Low_complexity Low_complexity 1 48 0 445 314 160 69 chr5 97650669 97651436 -101978714 - L2 LINE L2 -473 2841 2005 634 303 61 13 chr5 97652629 97652857 -101977293 + MIR SINE MIR 24 262 0 195 320 72 10 chr5 97653956 97654053 -101976097 + L2 LINE L2 3193 3295 -18 24 32 0 0 chr5 97654827 97654858 -101975292 + AT_rich Low_complexity Low_complexity 1 31 0 2600 170 37 58 chr5 97654893 97655516 -101974634 - L1MB7 LINE L1 -11 6173 5564 29 0 0 0 chr5 97655977 97656006 -101974144 + AT_rich Low_complexity Low_complexity 1 29 0 26 50 0 0 chr5 97659453 97659493 -101970657 + AT_rich Low_complexity Low_complexity 1 40 0 27 29 0 0 chr5 97659709 97659743 -101970407 + AT_rich Low_complexity Low_complexity 1 34 0 204 40 0 0 chr5 97660147 97660172 -101969978 + (A)n Simple_repeat Simple_repeat 1 25 0 2135 65 3 62 chr5 97662537 97662844 -101967306 + AluY SINE Alu 18 306 -5 2220 110 0 3 chr5 97665253 97665554 -101964596 - AluSx SINE Alu -12 300 1 2349 71 3 3 chr5 97668546 97668855 -101961295 + AluY SINE Alu 1 309 -2 24 32 0 0 chr5 97669838 97669869 -101960281 + AT_rich Low_complexity Low_complexity 1 31 0 251 349 32 32 chr5 97670513 97670639 -101959511 + MIR3 SINE MIR 81 206 -2 2178 82 0 3 chr5 97670904 97671186 -101958964 + AluSx SINE Alu 17 297 -15 2135 112 0 3 chr5 97671608 97671922 -101958228 + AluSx SINE Alu 1 313 0 783 266 58 45 chr5 97672270 97672788 -101957362 - LTR33A LTR ERVL 0 523 37 288 0 0 0 chr5 97674534 97674566 -101955584 + (CA)n Simple_repeat Simple_repeat 1 32 0 6557 125 29 4 chr5 97675010 97676133 -101954017 - L1MC2 LINE L1 -7 6337 5188 405 286 69 26 chr5 97676139 97676328 -101953822 + L1MC/D LINE L1 5607 5803 -2005 21 57 0 0 chr5 97677123 97677158 -101952992 + AT_rich Low_complexity Low_complexity 1 35 0 2302 97 0 3 chr5 97679108 97679418 -101950732 - AluSc SINE Alu 0 309 1 609 229 59 35 chr5 97681541 97681711 -101948439 - MER5B DNA MER1_type -1 177 4 795 167 0 8 chr5 97681873 97682005 -101948145 + FLAM_C SINE Alu 1 131 -2 194 320 186 13 chr5 97682022 97682178 -101947972 + MIR SINE MIR 19 201 -7 233 325 12 24 chr5 97682267 97682350 -101947800 - MER117 DNA MER1_type -1 196 115 4086 104 44 10 chr5 97682745 97683359 -101946791 + MER41B LTR ERV1 1 635 0 294 340 50 0 chr5 97685071 97685171 -101944979 + L2 LINE L2 3136 3240 -32 1389 172 95 26 chr5 97686005 97686278 -101943872 + AluJo SINE Alu 3 294 -18 239 256 70 35 chr5 97686423 97686509 -101943641 - L2 LINE L2 -47 3225 3137 2444 49 3 16 chr5 97686780 97687084 -101943066 - AluY SINE Alu -11 300 1 365 241 213 0 chr5 97687354 97687462 -101942688 + MER5A DNA MER1_type 59 189 0 5141 110 21 18 chr5 97687836 97688608 -101941542 + MER4E LTR ERV1 1 774 -5 28 29 0 0 chr5 97689000 97689035 -101941115 + AT_rich Low_complexity Low_complexity 1 35 0 10050 192 63 74 chr5 97690326 97692058 -101938092 - L1PB1 LINE L1 0 6867 5117 180 0 0 0 chr5 97692058 97692078 -101938072 + (TTG)n Simple_repeat Simple_repeat 2 21 0 10050 192 63 74 chr5 97692078 97692397 -101937753 - L1PB1 LINE L1 -1750 5117 4796 944 109 0 0 chr5 97692397 97692525 -101937625 + AluSp/q SINE Alu 174 301 -12 10050 192 63 74 chr5 97692525 97697121 -101933029 - L1PB1 LINE L1 -2071 4796 91 1989 163 98 33 chr5 97697332 97697792 -101932358 + LTR2B LTR ERV1 1 490 0 266 310 86 52 chr5 97697886 97698060 -101932090 - MIR SINE MIR -54 208 29 280 244 58 129 chr5 97698189 97698414 -101931736 - L1ME3A LINE L1 -9 6161 5953 1073 121 65 0 chr5 97698422 97698621 -101931529 - L1MB3 LINE L1 0 6183 5972 21 0 0 0 chr5 97699702 97699723 -101930427 + AT_rich Low_complexity Low_complexity 1 21 0 287 289 56 0 chr5 97699964 97700054 -101930096 - MIR SINE MIR -2 260 166 287 322 13 59 chr5 97700092 97700244 -101929906 - MIR3 SINE MIR -27 181 37 1463 221 129 25 chr5 97701012 97701524 -101928626 + L1MC4 LINE L1 7476 8040 -2 1243 147 10 0 chr5 97703505 97703552 -101926598 + AluJb SINE Alu 85 130 -177 207 0 0 0 chr5 97703552 97703575 -101926575 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1243 147 10 0 chr5 97703575 97703748 -101926402 + AluJb SINE Alu 130 307 0 1110 128 6 0 chr5 97703749 97703913 -101926237 - AluSq SINE Alu -68 245 81 22 35 0 0 chr5 97704116 97704145 -101926005 + AT_rich Low_complexity Low_complexity 1 29 0 22 80 0 0 chr5 97704228 97704278 -101925872 + AT_rich Low_complexity Low_complexity 1 50 0 454 218 83 32 chr5 97704438 97704594 -101925556 - MER103 DNA DNA -1 165 2 300 326 43 28 chr5 97704941 97705082 -101925068 - MER5A DNA MER1_type -3 186 44 * 420 328 8 16 chr5 97704982 97705107 -101925043 + MER5A DNA MER1_type 59 182 -7 2338 109 0 6 chr5 97705276 97705588 -101924562 + AluSx SINE Alu 1 310 -2 266 376 46 0 chr5 97705825 97705934 -101924216 + L2 LINE L2 3158 3271 -1 218 206 14 0 chr5 97706343 97706416 -101923734 + (TA)n Simple_repeat Simple_repeat 1 74 0 237 170 0 38 chr5 97707511 97707564 -101922586 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 495 269 17 0 chr5 97707869 97707988 -101922162 + MIR SINE MIR 4 124 -138 266 309 60 129 chr5 97708056 97708273 -101921877 + L2 LINE L2 3027 3228 -44 2278 83 0 3 chr5 97709161 97709461 -101920689 - AluY SINE Alu -12 299 1 216 0 0 0 chr5 97709988 97710012 -101920138 + (T)n Simple_repeat Simple_repeat 1 24 0 24 0 0 0 chr5 97710566 97710590 -101919560 + AT_rich Low_complexity Low_complexity 1 24 0 1272 221 75 16 chr5 97711787 97712108 -101918042 + MER58B DNA MER1_type 2 341 0 2355 155 0 75 chr5 97712219 97712697 -101917453 + LTR32 LTR ERVL 16 457 -14 305 229 0 0 chr5 97713171 97713232 -101916918 - MIR SINE MIR -139 123 63 284 44 0 44 chr5 97713314 97713359 -101916791 + MADE1 DNA Mariner 38 80 0 806 234 30 0 chr5 97713385 97713552 -101916598 - MER5A DNA MER1_type -9 180 9 203 362 134 13 chr5 97713686 97713910 -101916240 + L2 LINE L2 2619 2869 -445 515 319 142 50 chr5 97715420 97716377 -101913773 - L2 LINE L2 -5 3267 2217 1785 106 87 4 chr5 97716462 97716726 -101913424 - AluSq SINE Alu -24 289 4 438 279 64 35 chr5 97717010 97717182 -101912968 - MIR SINE MIR -58 204 28 247 240 90 20 chr5 97717397 97717497 -101912653 + L1MC4a LINE L1 5539 5645 -476 241 196 54 134 chr5 97717530 97717754 -101912396 + L1MC4a LINE L1 5722 5927 -1881 230 271 0 0 chr5 97717748 97717807 -101912343 + L1ME4a LINE L1 5975 6033 -88 * 198 103 0 0 chr5 97717862 97717891 -101912259 + (CATA)n Simple_repeat Simple_repeat 3 31 0 288 267 84 21 chr5 97718009 97718200 -101911950 + L1ME4a LINE L1 5769 5971 -150 1741 113 0 0 chr5 97718500 97718729 -101911421 + AluSq SINE Alu 1 229 -84 23 0 0 0 chr5 97718760 97718783 -101911367 + AT_rich Low_complexity Low_complexity 1 23 0 1875 151 13 45 chr5 97720995 97721372 -101908778 + MLT1A1 LTR MaLR 1 365 0 2285 98 3 7 chr5 97721404 97721711 -101908439 + AluSp SINE Alu 1 306 -7 2188 98 0 3 chr5 97721771 97722056 -101908094 + AluSq SINE Alu 1 284 -29 875 146 8 0 chr5 97722547 97722677 -101907473 + AluJo/FLAM SINE Alu 3 133 -169 1910 107 14 14 chr5 97722679 97722983 -101907167 + AluSx SINE Alu 1 304 0 22 35 0 0 chr5 97723251 97723280 -101906870 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 97723851 97723875 -101906275 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 97724338 97724360 -101905790 + AT_rich Low_complexity Low_complexity 1 22 0 288 277 0 0 chr5 97724637 97724702 -101905448 + MIR SINE MIR 87 151 -111 213 267 0 0 chr5 97724974 97725019 -101905131 - L3 LINE CR1 -27 1550 1506 243 264 28 28 chr5 97725027 97725099 -101905051 - L3 LINE CR1 -308 1269 1198 2360 91 0 0 chr5 97725575 97725873 -101904277 + AluSx SINE Alu 1 298 -14 365 129 14 0 chr5 97726370 97726440 -101903710 + (CATAG)n Simple_repeat Simple_repeat 3 73 0 2344 44 40 3 chr5 97726587 97726883 -101903267 + AluY SINE Alu 1 307 -4 2229 97 3 3 chr5 97726886 97727184 -101902966 + AluSp SINE Alu 1 298 -15 415 257 139 0 chr5 97727311 97727455 -101902695 + MIR SINE MIR 73 236 -26 278 50 25 0 chr5 97727468 97727508 -101902642 + (TAGA)n Simple_repeat Simple_repeat 1 41 0 215 169 14 0 chr5 97727746 97727817 -101902333 + (TTTAA)n Simple_repeat Simple_repeat 1 72 0 697 216 82 26 chr5 97727917 97728111 -101902039 + MIR SINE MIR 2 206 -56 234 326 69 56 chr5 97728561 97728705 -101901445 + MIR SINE MIR 6 151 -111 185 289 0 0 chr5 97728720 97728765 -101901385 + L2 LINE L2 3216 3260 -12 341 321 7 0 chr5 97729888 97730025 -101900125 + (TA)n Simple_repeat Simple_repeat 1 138 0 283 356 32 19 chr5 97732106 97732319 -101897831 - MIR SINE MIR -32 230 16 30 59 0 0 chr5 97733779 97733830 -101896320 + AT_rich Low_complexity Low_complexity 1 51 0 305 204 51 31 chr5 97734741 97734839 -101895311 + L1ME4a LINE L1 5966 6065 -56 304 291 54 61 chr5 97736779 97736927 -101893223 - L2 LINE L2 -3 3310 3164 219 114 0 0 chr5 97737219 97737254 -101892896 + (TATG)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr5 97737652 97737676 -101892474 + AT_rich Low_complexity Low_complexity 1 24 0 27 73 0 0 chr5 97738019 97738074 -101892076 + AT_rich Low_complexity Low_complexity 1 55 0 896 90 4 57 chr5 97739268 97739550 -101890600 + (TA)n Simple_repeat Simple_repeat 1 266 0 295 189 19 0 chr5 97739944 97739997 -101890153 - L2 LINE L2 -30 3242 3189 2169 114 7 7 chr5 97740056 97740362 -101889788 + AluSq SINE Alu 1 306 -7 767 174 0 0 chr5 97740401 97740516 -101889634 - FLAM_A SINE Alu -18 115 1 192 40 0 0 chr5 97741997 97742022 -101888128 + (TG)n Simple_repeat Simple_repeat 2 26 0 1376 182 20 30 chr5 97742222 97742518 -101887632 - AluJb SINE Alu -19 293 1 273 204 21 21 chr5 97742534 97742627 -101887523 + CT-rich Low_complexity Low_complexity 3 95 0 1296 169 50 33 chr5 97742635 97742877 -101887273 - AluJo SINE Alu -43 269 24 2550 44 0 0 chr5 97743046 97743343 -101886807 - AluY SINE Alu -14 297 1 2358 94 0 0 chr5 97743343 97743640 -101886510 - AluSg SINE Alu -13 297 1 30 0 0 0 chr5 97744613 97744643 -101885507 + AT_rich Low_complexity Low_complexity 1 30 0 3570 145 8 60 chr5 97745176 97745293 -101884857 + MER67C LTR ERV1 4 126 -584 2072 113 58 0 chr5 97745293 97745586 -101884564 + AluSq SINE Alu 1 310 -3 3570 145 8 60 chr5 97745586 97746214 -101883936 + MER67C LTR ERV1 126 710 0 2381 80 10 0 chr5 97747436 97747738 -101882412 + AluY SINE Alu 1 305 -6 813 257 66 56 chr5 97748091 97748410 -101881740 - L2 LINE L2 0 3313 2992 243 190 21 144 chr5 97748458 97748652 -101881498 - MLT1J LTR MaLR -284 162 2 3956 77 45 0 chr5 97748985 97749515 -101880635 + MER41A LTR ERV1 1 554 0 4105 125 36 3 chr5 97749601 97750203 -101879947 + MER41A-int LTR ERV1 1 622 -5324 * 12707 119 27 23 chr5 97750190 97752591 -101877559 + MER41A-int LTR ERV1 1080 4000 -1015 2265 121 0 0 chr5 97752591 97752898 -101877252 + AluSx SINE Alu 1 307 -5 12707 119 27 23 chr5 97752898 97753226 -101876924 + MER41A-int LTR ERV1 4000 4325 -690 1991 164 3 0 chr5 97753228 97753539 -101876611 + AluSx SINE Alu 1 312 0 1197 55 0 0 chr5 97753619 97753764 -101876386 + MER41-int LTR ERV1 5776 5920 -26 3071 69 5 0 chr5 97753815 97754208 -101875942 + MER41A LTR ERV1 159 553 -1 334 275 0 0 chr5 97754690 97754759 -101875391 - HAL1 LINE L1 -2426 81 13 20956 157 35 21 chr5 97754851 97756584 -101873566 + L1M1 LINE L1 14 1722 -5843 225 0 0 0 chr5 97756584 97756609 -101873541 + (GA)n Simple_repeat Simple_repeat 2 26 0 20956 157 35 21 chr5 97756609 97757523 -101872627 + L1M1 LINE L1 1722 2622 -4943 2137 116 0 3 chr5 97757523 97757817 -101872333 + AluSg SINE Alu 2 294 -16 20956 157 35 21 chr5 97757817 97758807 -101871343 + L1M1 LINE L1 2622 3597 -3968 207 0 0 0 chr5 97758807 97758830 -101871320 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 20956 157 35 21 chr5 97758830 97759501 -101870649 + L1M1 LINE L1 3597 4393 -3172 2173 109 0 16 chr5 97759501 97759813 -101870337 + AluSx SINE Alu 6 312 0 20956 157 35 21 chr5 97759813 97760065 -101870085 + L1M1 LINE L1 4393 4640 -2925 1432 93 0 0 chr5 97760063 97760268 -101869882 + L1MA3 LINE L1 5743 5947 -358 * 732 264 0 0 chr5 97760266 97760414 -101869736 + L1M2c LINE L1 710 857 -5992 * 5215 211 48 10 chr5 97760417 97760634 -101869516 + L1M2c LINE L1 1501 1708 -5140 2298 73 3 0 chr5 97760634 97760923 -101869227 + AluY SINE Alu 8 297 -14 5215 211 48 10 chr5 97760923 97762778 -101867372 + L1M2c LINE L1 1708 3646 -3202 2254 160 46 2 chr5 97762778 97763215 -101866935 + L1MA5A LINE L1 5838 6293 -4 2316 98 0 9 chr5 97763223 97763539 -101866611 + AluSq SINE Alu 1 313 0 2152 104 6 22 chr5 97763548 97763866 -101866284 + AluSq SINE Alu 1 313 0 181 265 82 0 chr5 97763874 97763923 -101866227 + MIR3 SINE MIR 138 190 -18 691 228 156 9 chr5 97764729 97764783 -101865367 - MIR SINE MIR -1 261 216 279 0 0 0 chr5 97764783 97764814 -101865336 + (TA)n Simple_repeat Simple_repeat 1 31 0 691 228 156 9 chr5 97764814 97764983 -101865167 - MIR SINE MIR -46 216 5 1070 170 6 0 chr5 97766409 97766580 -101863570 + FAM SINE Alu 1 172 -3 365 263 159 52 chr5 97767008 97767240 -101862910 + L1ME4a LINE L1 5772 6028 -93 4884 112 20 32 chr5 97767356 97767736 -101862414 - MER4E LTR ERV1 0 779 396 2088 136 0 3 chr5 97767736 97768037 -101862113 - AluSx SINE Alu -12 300 1 4884 112 20 32 chr5 97768037 97768444 -101861706 - MER4E LTR ERV1 -383 396 1 2222 122 0 3 chr5 97768728 97769039 -101861111 + AluSg SINE Alu 1 310 0 796 246 0 12 chr5 97769184 97769355 -101860795 - FRAM SINE Alu -8 168 1 414 117 0 0 chr5 97770062 97770122 -101860028 + MSTC LTR MaLR 369 428 0 313 180 101 0 chr5 97770421 97770510 -101859640 + MER112 DNA MER1_type 74 171 -89 368 193 64 46 chr5 97770857 97770966 -101859184 + MER5A DNA MER1_type 1 111 -78 655 290 104 14 chr5 97771636 97771857 -101858293 - MIR SINE MIR 0 262 22 216 312 26 26 chr5 97772154 97772231 -101857919 + MER5A DNA MER1_type 2 78 -111 360 257 0 0 chr5 97772236 97772306 -101857844 - MER5A DNA MER1_type -111 78 9 556 249 129 76 chr5 97772313 97772350 -101857800 + MIR SINE MIR 16 50 -212 2141 102 3 7 chr5 97772350 97772643 -101857507 - AluSg SINE Alu -16 294 3 556 249 129 76 chr5 97772643 97772830 -101857320 + MIR SINE MIR 50 252 -10 2794 16 0 0 chr5 97774020 97774331 -101855819 + AluYa5 SINE Alu 1 311 0 1982 89 44 4 chr5 97775663 97775829 -101854321 - AluSg SINE Alu -15 295 112 186 71 0 0 chr5 97775829 97775857 -101854293 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1982 89 44 4 chr5 97775857 97775960 -101854190 - AluSg SINE Alu -198 112 15 180 349 223 17 chr5 97776398 97776636 -101853514 + L2 LINE L2 1774 2060 -1254 1555 171 52 11 chr5 97776723 97777009 -101853141 - AluJb SINE Alu -14 298 1 21 36 0 0 chr5 97777015 97777043 -101853107 + AT_rich Low_complexity Low_complexity 1 28 0 5990 80 6 3 chr5 97777126 97777903 -101852247 + LTR17 LTR ERV1 1 780 0 1339 197 91 42 chr5 97778339 97778766 -101851384 + MER39 LTR ERV1 260 707 0 2405 132 118 2 chr5 97778872 97779297 -101850853 + LTR24C LTR ERV1 162 635 0 186 340 20 10 chr5 97779298 97779398 -101850752 + L2 LINE L2 2211 2311 -1003 2668 152 113 8 chr5 97779427 97779947 -101850203 + LTR49 LTR ERV1 1 575 -20 614 177 91 91 chr5 97780080 97780255 -101849895 + MER58C DNA MER1_type 41 215 0 2037 206 101 84 chr5 97780479 97781194 -101848956 + MER21B LTR ERV1 15 741 -122 231 298 36 12 chr5 97781684 97781768 -101848382 + MIR3 SINE MIR 121 206 -2 21 0 0 0 chr5 97782508 97782529 -101847621 + AT_rich Low_complexity Low_complexity 1 21 0 2262 73 0 54 chr5 97782667 97782980 -101847170 + AluY SINE Alu 1 296 -15 1983 113 7 14 chr5 97783284 97783576 -101846574 - AluSq SINE Alu -7 306 17 1061 129 53 6 chr5 97783821 97783992 -101846158 - AluJo SINE Alu -11 301 123 295 57 0 0 chr5 97784064 97784099 -101846051 + (TG)n Simple_repeat Simple_repeat 1 35 0 387 0 0 0 chr5 97784149 97784192 -101845958 + (TG)n Simple_repeat Simple_repeat 1 43 0 628 211 0 0 chr5 97784195 97784309 -101845841 - AluJo SINE Alu -186 116 3 698 125 71 0 chr5 97784317 97784429 -101845721 - MER57A LTR ERV1 -275 128 9 434 148 49 25 chr5 97784485 97784607 -101845543 + T-rich Low_complexity Low_complexity 5 129 0 * 597 71 53 0 chr5 97784582 97784695 -101845455 + CT-rich Low_complexity Low_complexity 2 120 0 763 164 8 15 chr5 97784706 97784840 -101845310 - AluJo SINE Alu -169 133 1 201 250 66 66 chr5 97784840 97784916 -101845234 + L2 LINE L2 2636 2711 -603 2107 118 7 0 chr5 97784953 97785249 -101844901 - AluSq SINE Alu -15 298 1 1957 127 11 0 chr5 97785357 97785797 -101844353 - L1MA7 LINE L1 -2 6289 5739 23 54 0 0 chr5 97786066 97786103 -101844047 + AT_rich Low_complexity Low_complexity 1 37 0 2175 225 44 21 chr5 97786296 97786927 -101843223 + MER114 LTR ERV 3 648 0 34 42 0 0 chr5 97791218 97791266 -101838884 + AT_rich Low_complexity Low_complexity 1 48 0 36169 100 16 11 chr5 97792605 97798733 -101831417 + L1PA6 LINE L1 1 6153 -1 455 239 0 54 chr5 97798745 97798875 -101831275 - MER5A DNA MER1_type -50 139 17 260 250 88 67 chr5 97798932 97799216 -101830934 - L1M4 LINE L1 -1458 4688 4399 2193 117 0 16 chr5 97799550 97799858 -101830292 - AluSx SINE Alu -9 303 1 2557 111 11 3 chr5 97801262 97801623 -101828527 - THE1B LTR MaLR 0 364 1 2422 96 3 0 chr5 97801623 97801947 -101828203 - THE1B-int LTR MaLR 0 1580 1256 5442 159 19 4 chr5 97804457 97805566 -101824584 - THE1B-int LTR MaLR -312 1268 192 * 6053 186 16 4 chr5 97805561 97806774 -101823376 - L1P LINE L1 -897 5249 4022 882 239 42 15 chr5 97806774 97807104 -101823046 + L1ME LINE L1 2676 3014 -3132 3042 137 6 28 chr5 97807179 97807196 -101822954 - L1M2 LINE L1 -499 5801 5785 6135 129 56 41 chr5 97807196 97808408 -101821742 - Tigger3b DNA MER2_type -1 1230 1 3042 137 6 28 chr5 97808408 97808936 -101821214 - L1M2 LINE L1 -515 5785 5268 1373 229 68 5 chr5 97808939 97809349 -101820801 + L1ME LINE L1 4851 5286 -860 216 229 57 29 chr5 97809392 97809462 -101820688 - L2 LINE L2 -556 2758 2687 808 171 55 0 chr5 97809521 97809685 -101820465 + L1ME LINE L1 5275 5447 -727 292 149 15 45 chr5 97809687 97809754 -101820396 - L1M4 LINE L1 -1538 4608 4544 * 521 139 30 13 chr5 97809743 97809849 -101820301 + L1ME LINE L1 5445 5550 -571 259 212 55 27 chr5 97809887 97810033 -101820117 + (TTATA)n Simple_repeat Simple_repeat 4 153 0 248 159 45 0 chr5 97810221 97810265 -101819885 - MSTB LTR MaLR 0 426 381 18308 189 18 20 chr5 97810266 97811632 -101818518 + L1PA12 LINE L1 931 2298 -5286 2396 80 0 7 chr5 97811632 97811931 -101818219 + AluY SINE Alu 1 297 -14 18308 189 18 20 chr5 97811931 97812015 -101818135 + L1PA12 LINE L1 2298 2381 -5203 1797 104 47 161 chr5 97812015 97812396 -101817754 + THE1C LTR MaLR 1 331 -44 2206 122 0 0 chr5 97812396 97812691 -101817459 - AluSg SINE Alu -15 295 1 1797 104 47 161 chr5 97812691 97812732 -101817418 + THE1C LTR MaLR 331 375 0 18308 189 18 20 chr5 97812732 97813844 -101816306 + L1PA12 LINE L1 2381 3494 -4090 1945 128 0 25 chr5 97813844 97814161 -101815989 + AluSx SINE Alu 11 320 0 18308 189 18 20 chr5 97814161 97816201 -101813949 + L1PA12 LINE L1 3494 6304 -1280 678 182 20 0 chr5 97816198 97816346 -101813804 + L1PA12 LINE L1 6614 6764 -820 * 1284 192 102 0 chr5 97816346 97816601 -101813549 - MSTB LTR MaLR -75 351 71 199 292 73 21 chr5 97816630 97816726 -101813424 + L2 LINE L2 3182 3282 -31 576 275 22 7 chr5 97816745 97816883 -101813267 + Charlie1a DNA MER1_type 8 147 -1308 1713 149 52 0 chr5 97816905 97817208 -101812942 + AluSx SINE Alu 1 317 0 1792 211 37 49 chr5 97817213 97817724 -101812426 - MLT1D LTR MaLR 0 505 1 260 191 157 22 chr5 97817724 97817813 -101812337 + Charlie1a DNA MER1_type 212 312 -1143 963 176 0 0 chr5 97817813 97817991 -101812159 - AluSx SINE Alu 0 312 135 370 101 29 0 chr5 97818010 97818079 -101812071 + (TA)n Simple_repeat Simple_repeat 1 71 0 765 159 0 8 chr5 97818079 97818205 -101811945 - AluSx SINE Alu -188 125 1 3869 167 52 31 chr5 97818252 97819145 -101811005 + Charlie1a DNA MER1_type 545 1455 0 846 143 0 0 chr5 97819284 97819410 -101810740 + AluSg/x SINE Alu 176 301 -11 2232 98 9 29 chr5 97819715 97820031 -101810119 + AluSx SINE Alu 1 310 -2 210 143 0 0 chr5 97820133 97820168 -101809982 + (A)n Simple_repeat Simple_repeat 1 35 0 2160 102 10 13 chr5 97820180 97820485 -101809665 + AluSx SINE Alu 1 304 -8 183 42 0 0 chr5 97820486 97820510 -101809640 + (TA)n Simple_repeat Simple_repeat 1 24 0 244 36 0 0 chr5 97821334 97821362 -101808788 - AluY SINE Alu -259 44 17 1738 163 23 20 chr5 97821362 97821668 -101808482 + AluJo SINE Alu 1 307 -5 826 280 37 26 chr5 97822042 97822313 -101807837 + LTR16B LTR ERVL 189 462 -2 635 225 91 67 chr5 97822319 97822528 -101807622 - MIR SINE MIR -25 237 24 299 265 89 12 chr5 97822633 97822755 -101807395 - MIR SINE MIR -64 144 42 1796 142 3 20 chr5 97822901 97823196 -101806954 - AluSx SINE Alu -22 290 1 482 304 81 25 chr5 97823277 97823438 -101806712 + MER91A DNA MER1_type 21 190 -6 259 192 39 0 chr5 97823463 97823515 -101806635 + MER91A DNA MER1_type 131 184 -6 334 331 45 7 chr5 97823614 97823768 -101806382 + L1ME4a LINE L1 5574 5733 -388 638 270 132 16 chr5 97823773 97824084 -101806066 + L1ME4a LINE L1 5773 6119 -2 361 293 158 6 chr5 97824601 97824765 -101805385 - MIR SINE MIR 0 262 74 332 252 0 58 chr5 97824943 97825046 -101805104 - MIR3 SINE MIR 0 208 112 523 279 58 6 chr5 97825097 97825269 -101804881 + MIR SINE MIR 7 187 -75 21 0 0 0 chr5 97825417 97825438 -101804712 + AT_rich Low_complexity Low_complexity 1 21 0 457 200 0 0 chr5 97825524 97825604 -101804546 - AluJ/FRAM SINE Alu -16 296 217 346 257 43 0 chr5 97825662 97825732 -101804418 - AluJ/FLAM SINE Alu -228 74 2 391 292 0 0 chr5 97825733 97825822 -101804328 - L2 LINE L2 -18 3295 3207 201 74 0 0 chr5 97826228 97826255 -101803895 + (CA)n Simple_repeat Simple_repeat 2 28 0 365 336 51 37 chr5 97826620 97826837 -101803313 + MIR SINE MIR 5 224 -38 2097 88 21 3 chr5 97829586 97829869 -101800281 - AluSx SINE Alu -15 297 10 24 32 0 0 chr5 97830757 97830788 -101799362 + AT_rich Low_complexity Low_complexity 1 31 0 446 303 97 12 chr5 97830958 97831123 -101799027 + MIR SINE MIR 26 204 -58 249 33 0 0 chr5 97831582 97831612 -101798538 + (CA)n Simple_repeat Simple_repeat 2 31 0 283 194 71 31 chr5 97832263 97832361 -101797789 + L1ME4a LINE L1 5995 6096 -25 28 71 0 0 chr5 97832414 97832470 -101797680 + AT_rich Low_complexity Low_complexity 1 56 0 2335 66 7 26 chr5 97834603 97834907 -101795243 + AluY SINE Alu 1 298 -13 2401 87 3 6 chr5 97835068 97835380 -101794770 - AluSx SINE Alu -1 311 1 2401 67 3 0 chr5 97835670 97835968 -101794182 + AluY SINE Alu 1 299 -12 315 0 0 0 chr5 97837283 97837318 -101792832 + (TA)n Simple_repeat Simple_repeat 1 35 0 2252 74 10 14 chr5 97837530 97837827 -101792323 - AluSq SINE Alu -17 296 1 2134 111 24 0 chr5 97837835 97838133 -101792017 - AluSg SINE Alu -5 305 1 24 32 0 0 chr5 97838978 97839009 -101791141 + AT_rich Low_complexity Low_complexity 1 31 0 861 160 0 0 chr5 97839559 97839690 -101790460 + AluJo SINE Alu 1 131 -171 21 57 0 0 chr5 97839894 97839929 -101790221 + AT_rich Low_complexity Low_complexity 1 35 0 1648 257 30 26 chr5 97840959 97841528 -101788622 - L1ME2 LINE L1 -16 6352 5782 710 169 8 16 chr5 97841529 97841653 -101788497 + AluJo SINE Alu 1 123 -189 246 62 0 0 chr5 97841653 97841685 -101788465 + (T)n Simple_repeat Simple_repeat 1 32 0 567 171 9 9 chr5 97841692 97841797 -101788353 + AluJo SINE Alu 131 235 -77 291 156 31 31 chr5 97841801 97841865 -101788285 - L1ME2 LINE L1 -588 5780 5717 1640 188 129 11 chr5 97841865 97842313 -101787837 - L1ME2 LINE L1 -1263 5087 4587 484 207 33 80 chr5 97842318 97842393 -101787757 - L1ME2 LINE L1 -2220 4130 4053 2104 92 41 3 chr5 97842393 97842688 -101787462 - AluY SINE Alu -5 306 1 2174 101 13 7 chr5 97842688 97842986 -101787164 - AluSp SINE Alu -13 300 1 484 207 33 80 chr5 97842986 97843122 -101787028 - L1ME2 LINE L1 -2295 4055 3928 * 1111 249 67 6 chr5 97843120 97843481 -101786669 + L1M4 LINE L1 3986 4368 -1778 854 208 119 16 chr5 97843491 97843803 -101786347 - L1ME2 LINE L1 -2947 3403 3060 239 288 12 0 chr5 97843841 97843921 -101786229 - L1ME2 LINE L1 -3621 2729 2649 1710 164 63 30 chr5 97843983 97844887 -101785263 - L1MA8 LINE L1 -262 6029 5002 3613 251 68 53 chr5 97844892 97846410 -101783740 - L1ME2 LINE L1 -3784 2566 1334 2132 142 0 7 chr5 97846410 97846719 -101783431 - AluSx SINE Alu -5 307 1 3613 251 68 53 chr5 97846719 97847465 -101782685 - L1ME2 LINE L1 -5016 1334 601 1858 261 57 58 chr5 97847551 97847868 -101782282 - L1M3b LINE L1 -5541 740 423 2336 81 7 7 chr5 97847868 97848177 -101781973 - AluY SINE Alu -2 309 1 1858 261 57 58 chr5 97848177 97848477 -101781673 - L1M3b LINE L1 -5858 423 124 705 260 143 53 chr5 97848491 97848737 -101781413 - L1MCc LINE L1 -3935 3187 2965 2196 123 3 0 chr5 97848737 97849039 -101781111 - AluSx SINE Alu -9 303 1 705 260 143 53 chr5 97849039 97849246 -101780904 - L1MCc LINE L1 -4157 2965 2693 1836 118 255 11 chr5 97849246 97849603 -101780547 - Tigger2 DNA MER2_type 0 2718 2275 1170 257 87 35 chr5 97849621 97850854 -101779296 - L1MCc LINE L1 -4420 2702 1182 765 191 337 28 chr5 97850892 97851180 -101778970 + MSTD LTR MaLR 20 396 0 981 309 70 42 chr5 97851180 97851708 -101778442 - L1MCc LINE L1 -5237 1186 644 1993 282 36 10 chr5 97851765 97852378 -101777772 - L1MCc LINE L1 -5778 645 17 21 36 0 0 chr5 97852458 97852486 -101777664 + AT_rich Low_complexity Low_complexity 1 28 0 652 323 24 110 chr5 97853667 97854627 -101775523 + L2 LINE L2 2392 3262 -10 713 269 119 40 chr5 97854764 97855184 -101774966 + MLT1L LTR MaLR 161 613 -2 1490 171 40 11 chr5 97855673 97855947 -101774203 + AluJo SINE Alu 1 282 -30 203 343 15 15 chr5 97856057 97856124 -101774026 - L2 LINE L2 -13 3300 3234 260 292 123 39 chr5 97856400 97856554 -101773596 + MIR SINE MIR 20 186 -76 572 285 43 24 chr5 97856574 97856781 -101773369 - MIR SINE MIR -10 252 42 2152 117 0 0 chr5 97858189 97858479 -101771671 - AluSg SINE Alu -20 290 1 21 36 0 0 chr5 97859661 97859689 -101770461 + AT_rich Low_complexity Low_complexity 1 28 0 2240 61 0 7 chr5 97860062 97860339 -101769811 - AluY SINE Alu -13 298 24 2005 149 38 20 chr5 97860683 97861025 -101769125 + MER7A DNA MER2_type 1 346 0 32 0 0 0 chr5 97861556 97861588 -101768562 + AT_rich Low_complexity Low_complexity 1 32 0 2291 105 0 10 chr5 97861698 97862004 -101768146 - AluSc SINE Alu -6 303 1 709 196 15 144 chr5 97862211 97862538 -101767612 - L1ME LINE L1 -370 5800 5516 2337 98 3 0 chr5 97862545 97862852 -101767298 - AluSp SINE Alu -5 308 1 1702 175 7 3 chr5 97863584 97863875 -101766275 + AluSq SINE Alu 1 292 -21 192 158 0 0 chr5 97864071 97864109 -101766041 + A-rich Low_complexity Low_complexity 1 38 0 8317 192 46 89 chr5 97864673 97868124 -101762026 - L1 LINE L1 -1032 6176 3159 261 0 0 0 chr5 97868124 97868153 -101761997 + (TTG)n Simple_repeat Simple_repeat 2 30 0 8317 192 46 89 chr5 97868153 97871183 -101758967 - L1 LINE L1 -4049 3159 1 2207 115 0 6 chr5 97871216 97871529 -101758621 - AluSx SINE Alu -1 311 1 203 161 0 0 chr5 97873010 97873041 -101757109 - MIR SINE MIR -112 150 120 2116 115 0 3 chr5 97873053 97873339 -101756811 + AluSx SINE Alu 1 285 -27 1258 167 0 0 chr5 97874004 97874202 -101755948 - AluJo SINE Alu -30 282 85 815 238 6 12 chr5 97874483 97874643 -101755507 + MER8 DNA MER2_type 2 160 -79 192 235 0 0 chr5 97874814 97874848 -101755302 - MIR SINE MIR -112 150 117 363 113 0 0 chr5 97874857 97874910 -101755240 + Alu SINE Alu 1 53 -248 365 174 29 14 chr5 97874976 97875045 -101755105 - Tigger2 DNA MER2_type -2648 70 1 2170 102 0 14 chr5 97875160 97875454 -101754696 + AluSg SINE Alu 1 290 -20 196 256 205 0 chr5 97876142 97876220 -101753930 + L2 LINE L2 2890 2983 -289 1848 152 0 30 chr5 97876333 97876636 -101753514 - AluSx SINE Alu -18 294 1 207 0 0 0 chr5 97876645 97876668 -101753482 + (T)n Simple_repeat Simple_repeat 1 23 0 285 313 61 10 chr5 97876831 97876930 -101753220 - L2 LINE L2 0 3272 3169 187 363 87 56 chr5 97877037 97877359 -101752791 + L2 LINE L2 2525 2856 -458 1704 154 31 7 chr5 97877426 97877734 -101752416 - AluJb SINE Alu 0 312 6 262 212 12 12 chr5 97877746 97877831 -101752319 + CT-rich Low_complexity Low_complexity 1 85 0 1371 160 21 114 chr5 97877838 97878025 -101752125 - AluJo SINE Alu -1 301 157 2104 109 7 13 chr5 97878025 97878327 -101751823 - AluSx SINE Alu -12 300 1 1371 160 21 114 chr5 97878327 97878471 -101751679 - AluJo SINE Alu -145 157 1 199 349 95 0 chr5 97878636 97878699 -101751451 + L2 LINE L2 3200 3268 -4 401 263 51 8 chr5 97879191 97879309 -101750841 - MER3 DNA MER1_type -1 208 86 25 31 0 0 chr5 97880027 97880059 -101750091 + AT_rich Low_complexity Low_complexity 1 32 0 29 28 0 0 chr5 97881048 97881084 -101749066 + AT_rich Low_complexity Low_complexity 1 36 0 263 264 0 0 chr5 97881323 97881395 -101748755 + T-rich Low_complexity Low_complexity 1 72 0 296 275 34 53 chr5 97881497 97881704 -101748446 - L1MEd LINE L1 -3211 2918 2716 243 146 0 0 chr5 97882121 97882162 -101747988 + (TC)n Simple_repeat Simple_repeat 2 42 0 338 304 101 63 chr5 97882213 97882719 -101747431 - L1MEd LINE L1 -5063 1056 532 1659 167 0 53 chr5 97883084 97883407 -101746743 + AluJo SINE Alu 1 306 -6 365 288 90 0 chr5 97884601 97884712 -101745438 - MIR SINE MIR -68 140 20 198 0 0 0 chr5 97885596 97885618 -101744532 + (T)n Simple_repeat Simple_repeat 1 22 0 2490 51 0 0 chr5 97887616 97887911 -101742239 - AluY SINE Alu -16 295 1 24 0 0 0 chr5 97887967 97887991 -101742159 + AT_rich Low_complexity Low_complexity 1 24 0 290 249 239 10 chr5 97888792 97888997 -101741153 - L1ME4a LINE L1 -52 6069 5818 1836 143 10 19 chr5 97889003 97889310 -101740840 + AluJo SINE Alu 3 306 -6 2059 122 3 7 chr5 97890819 97891122 -101739028 - AluSx SINE Alu -10 302 1 2659 22 0 0 chr5 97891188 97891500 -101738650 - L1PA3 LINE L1 0 6155 5844 266 111 22 0 chr5 97891589 97891634 -101738516 + Alu SINE Alu 248 293 -8 271 182 45 15 chr5 97891671 97891737 -101738413 + MER4-int LTR ERV1 1089 1156 -5442 212 338 13 0 chr5 97892443 97892520 -101737630 - L3b LINE CR1 -172 1411 1334 836 224 17 0 chr5 97892544 97892718 -101737432 - MER58A DNA MER1_type -21 203 27 246 327 136 9 chr5 97892719 97892939 -101737211 - L3b LINE CR1 -234 1349 1102 240 263 74 32 chr5 97892997 97893092 -101737058 - L2 LINE L2 -1 3271 3173 185 238 63 32 chr5 97893224 97893287 -101736863 + L3 LINE CR1 1293 1357 -220 2466 72 0 0 chr5 97894108 97894415 -101735735 + AluY SINE Alu 1 307 -4 705 190 172 0 chr5 97894591 97894754 -101735396 - MER20 DNA MER1_type -4 215 25 1310 40 0 0 chr5 97895391 97895541 -101734609 + AluSc SINE Alu 146 295 -14 245 287 19 9 chr5 97895664 97895772 -101734378 + CT-rich Low_complexity Low_complexity 3 111 0 1866 66 93 4 chr5 97896469 97896755 -101733395 - AluY SINE Alu 0 309 1 905 186 0 0 chr5 97896918 97897063 -101733087 + FAM SINE Alu 13 157 -28 1614 179 23 7 chr5 97897106 97897437 -101732713 + AluJo SINE Alu 1 312 0 40 0 0 0 chr5 97897639 97897679 -101732471 + AT_rich Low_complexity Low_complexity 1 40 0 260 27 27 0 chr5 97900613 97900650 -101729500 + (TG)n Simple_repeat Simple_repeat 2 39 0 31 26 0 0 chr5 97901567 97901605 -101728545 + AT_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr5 97905295 97905329 -101724821 + AT_rich Low_complexity Low_complexity 1 34 0 2149 149 10 29 chr5 97910042 97910450 -101719700 - L1MA6 LINE L1 -10 6290 5891 24 53 0 0 chr5 97910638 97910676 -101719474 + AT_rich Low_complexity Low_complexity 1 38 0 718 200 25 0 chr5 97910708 97910828 -101719322 + FLAM_A SINE Alu 1 123 -10 189 74 0 0 chr5 97913305 97913332 -101716818 + (T)n Simple_repeat Simple_repeat 1 27 0 21 36 0 0 chr5 97914264 97914292 -101715858 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 97918818 97918840 -101711310 + AT_rich Low_complexity Low_complexity 1 22 0 230 294 226 0 chr5 97921779 97921881 -101708269 + MIR SINE MIR 22 146 -62 21 0 0 0 chr5 97922671 97922692 -101707458 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 97923866 97923888 -101706262 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 97924025 97924055 -101706095 + AT_rich Low_complexity Low_complexity 1 30 0 234 0 0 0 chr5 97925055 97925081 -101705069 + (A)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr5 97926432 97926460 -101703690 + AT_rich Low_complexity Low_complexity 1 28 0 9332 116 22 39 chr5 97926861 97928420 -101701730 + L1PA10 LINE L1 3783 5329 -839 2190 113 0 3 chr5 97928420 97928712 -101701438 - AluSq SINE Alu -22 291 1 9332 116 22 39 chr5 97928712 97929534 -101700616 + L1PA10 LINE L1 5329 6164 -4 2361 75 16 0 chr5 97929539 97929844 -101700306 + AluSp SINE Alu 1 310 -3 363 252 258 26 chr5 97930579 97930730 -101699420 - MIR SINE MIR -67 195 10 185 246 15 0 chr5 97933550 97933615 -101696535 + GA-rich Low_complexity Low_complexity 1 66 0 23 33 0 0 chr5 97933830 97933860 -101696290 + AT_rich Low_complexity Low_complexity 1 30 0 1799 164 17 20 chr5 97933946 97934238 -101695912 - AluJo SINE Alu -21 291 1 320 194 0 129 chr5 97934319 97934412 -101695738 - MER2 DNA MER2_type -259 86 6 543 250 107 36 chr5 97935395 97935591 -101694559 + MIR SINE MIR 51 260 -2 205 294 65 54 chr5 97935734 97935826 -101694324 - MIR SINE MIR -57 205 113 320 232 158 32 chr5 97936389 97936484 -101693666 - MIR SINE MIR -61 147 41 302 317 124 14 chr5 97938241 97938386 -101691764 + MIR SINE MIR 96 256 -6 407 211 0 0 chr5 97938576 97938647 -101691503 - L2 LINE L2 0 3313 3243 610 188 107 148 chr5 97938832 97939264 -101690886 - LTR33A LTR ERVL -19 504 91 749 288 108 67 chr5 97939342 97939864 -101690286 - L2 LINE L2 -339 2975 2421 1798 155 36 0 chr5 97939864 97940142 -101690008 - AluJo SINE Alu -24 288 1 749 288 108 67 chr5 97940142 97940250 -101689900 - L2 LINE L2 -893 2421 2319 270 69 52 0 chr5 97940602 97940660 -101689490 + (CA)n Simple_repeat Simple_repeat 2 62 0 491 33 0 0 chr5 97940941 97941001 -101689149 - MER30B DNA MER1_type -127 63 4 251 236 18 0 chr5 97941079 97941134 -101689016 + MIR SINE MIR 205 260 -2 22 35 0 0 chr5 97941494 97941523 -101688627 + AT_rich Low_complexity Low_complexity 1 29 0 1355 111 69 5 chr5 97941917 97942133 -101688017 - MER30 DNA MER1_type 0 230 1 2207 132 3 40 chr5 97942229 97942608 -101687542 + MLT1A1 LTR MaLR 1 365 0 34 0 0 0 chr5 97942640 97942674 -101687476 + AT_rich Low_complexity Low_complexity 1 34 0 2394 90 0 3 chr5 97943374 97943684 -101686466 + AluSg SINE Alu 1 309 -1 193 293 69 0 chr5 97944144 97944202 -101685948 - L2 LINE L2 -28 3244 3183 1155 181 5 5 chr5 97944240 97944433 -101685717 - AluJo SINE Alu -104 208 16 1084 257 32 35 chr5 97944454 97944859 -101685291 - L1MC4a LINE L1 -1870 5938 5535 1207 206 23 9 chr5 97945050 97945268 -101684882 - AluJb SINE Alu -91 221 1 231 278 63 146 chr5 97945608 97945813 -101684337 + MIR SINE MIR 2 189 -73 1871 148 21 0 chr5 97945900 97946183 -101683967 + AluJb SINE Alu 3 291 -21 321 315 19 19 chr5 97946572 97946680 -101683470 - L2 LINE L2 -19 3294 3187 1077 201 5 14 chr5 97946681 97946895 -101683255 - AluJo SINE Alu -15 297 86 1924 137 0 10 chr5 97947377 97947670 -101682480 - AluSx SINE Alu -22 290 1 236 304 43 43 chr5 97948195 97948310 -101681840 + L2 LINE L2 2941 3055 -217 2255 113 0 10 chr5 97949348 97949659 -101680491 - AluSx SINE Alu -4 308 1 183 167 0 56 chr5 97950575 97950611 -101679539 - L2 LINE L2 -212 3060 3027 698 284 20 5 chr5 97951496 97951700 -101678450 + MIR SINE MIR 49 255 -7 22 0 0 0 chr5 97951888 97951910 -101678240 + AT_rich Low_complexity Low_complexity 1 22 0 800 194 0 0 chr5 97951912 97952046 -101678104 - AluJb SINE Alu -178 134 1 195 274 179 12 chr5 97952539 97952623 -101677527 - L2 LINE L2 -4 3309 3212 21 0 0 0 chr5 97952832 97952853 -101677297 + AT_rich Low_complexity Low_complexity 1 21 0 337 224 13 0 chr5 97953243 97953319 -101676831 - Charlie8 DNA MER1_type -2216 201 125 2556 59 0 7 chr5 97953323 97953630 -101676520 - AluY SINE Alu -6 305 1 1487 159 88 25 chr5 97953661 97953834 -101676316 - AluJb SINE Alu -11 301 102 198 0 0 0 chr5 97953834 97953856 -101676294 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1487 159 88 25 chr5 97953856 97953965 -101676185 - AluJb SINE Alu -210 102 1 2146 100 3 23 chr5 97954202 97954501 -101675649 - AluSx SINE Alu -19 293 1 182 217 130 0 chr5 97954602 97954648 -101675502 + MIR SINE MIR 49 100 -162 234 270 63 0 chr5 97955327 97955390 -101674760 + L2 LINE L2 3244 3310 -3 345 321 138 30 chr5 97955456 97955817 -101674333 - MLT1L LTR MaLR -21 594 195 406 141 35 59 chr5 97957000 97957085 -101673065 - MIR SINE MIR -62 200 118 901 226 55 5 chr5 97957124 97957323 -101672827 - MER58A DNA MER1_type -15 209 1 2004 147 3 0 chr5 97957500 97957792 -101672358 + AluSq SINE Alu 1 293 -20 2415 112 0 0 chr5 97959064 97959376 -101670774 + AluSx SINE Alu 1 312 0 545 293 20 14 chr5 97959521 97959668 -101670482 - MIR SINE MIR -88 174 27 734 262 91 42 chr5 97960186 97960472 -101669678 + MLT1I LTR MaLR 105 404 -5 2083 36 12 0 chr5 97961549 97961799 -101668351 + L1PA3 LINE L1 5892 6144 -11 342 0 0 0 chr5 97961800 97961838 -101668312 + (TA)n Simple_repeat Simple_repeat 2 39 0 325 244 165 16 chr5 97962178 97962305 -101667845 - MER5A DNA MER1_type -6 183 38 420 214 86 17 chr5 97962466 97962583 -101667567 + MER94 DNA DNA 7 131 -3 379 325 147 33 chr5 97964938 97965729 -101664421 + L2 LINE L2 1566 2446 -868 756 185 201 5 chr5 97965801 97965990 -101664160 - MIR SINE MIR -35 227 2 563 266 158 10 chr5 97966650 97966853 -101663297 + MIR SINE MIR 2 234 -28 185 306 47 35 chr5 97967354 97967439 -101662711 + L2 LINE L2 3187 3272 0 871 174 84 13 chr5 97968004 97968159 -101661991 + FRAM SINE Alu 1 166 0 201 74 0 0 chr5 97969589 97969616 -101660534 + (A)n Simple_repeat Simple_repeat 1 27 0 1917 144 14 3 chr5 97970384 97970676 -101659474 - AluJo SINE Alu -17 295 1 708 279 78 58 chr5 97971355 97971844 -101658306 + MLT1G1 LTR MaLR 1 529 -20 260 333 51 36 chr5 97971853 97971991 -101658159 + MIR SINE MIR 27 166 -96 250 294 37 68 chr5 97972479 97972642 -101657508 + MIR SINE MIR 59 216 -46 419 365 63 37 chr5 97972668 97973227 -101656923 + L2 LINE L2 2437 3081 -191 823 294 132 10 chr5 97973619 97973908 -101656242 - MLT1I LTR MaLR 0 409 86 15080 163 31 16 chr5 97974174 97975119 -101655031 + L1MA4 LINE L1 2234 3163 -3137 2181 114 0 3 chr5 97975119 97975416 -101654734 + AluSq SINE Alu 11 306 -7 15080 163 31 16 chr5 97975416 97975654 -101654496 + L1MA4 LINE L1 3163 3396 -2904 2041 118 0 7 chr5 97975654 97975942 -101654208 + AluSq SINE Alu 1 286 -27 3403 51 5 2 chr5 97975942 97976376 -101653774 + L1PA5 LINE L1 5720 6154 0 15080 163 31 16 chr5 97976376 97979190 -101650960 + L1MA4 LINE L1 3395 6295 -5 455 286 117 21 chr5 97979611 97979901 -101650249 + Charlie4 DNA MER1_type 452 769 -1192 1473 135 30 30 chr5 97981459 97981726 -101648424 - MLT1D LTR MaLR 0 505 239 684 194 11 74 chr5 97982146 97982321 -101647829 - MLT1D LTR MaLR -462 164 1 553 288 35 12 chr5 97982541 97982711 -101647439 + MIR3 SINE MIR 29 202 -6 1934 213 97 30 chr5 97983139 97983246 -101646904 + MLT1E3 LTR MaLR 3 101 -523 2609 99 8 6 chr5 97983246 97983609 -101646541 - THE1B LTR MaLR 0 364 1 2885 6 0 0 chr5 97983618 97983929 -101646221 + AluYa5 SINE Alu 1 311 0 1934 213 97 30 chr5 97983929 97984431 -101645719 + MLT1E3 LTR MaLR 108 622 -2 294 87 29 14 chr5 97985605 97985674 -101644476 + (TA)n Simple_repeat Simple_repeat 2 71 0 303 28 0 0 chr5 97987613 97987649 -101642501 + (TG)n Simple_repeat Simple_repeat 2 37 0 21 57 0 0 chr5 97989466 97989501 -101640649 + AT_rich Low_complexity Low_complexity 1 35 0 296 229 0 0 chr5 97991023 97991084 -101639066 + L2 LINE L2 3252 3312 -1 504 205 60 0 chr5 97991766 97991883 -101638267 + MIR SINE MIR 137 260 -2 21 0 0 0 chr5 97991931 97991952 -101638198 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr5 97995266 97995309 -101634841 + AT_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr5 97996088 97996124 -101634026 + AT_rich Low_complexity Low_complexity 1 36 0 466 267 134 51 chr5 97997284 97997304 -101632846 - MIR SINE MIR -12 250 233 1699 55 5 5 chr5 97997304 97997521 -101632629 - AluY SINE Alu -8 303 87 466 267 134 51 chr5 97997521 97997717 -101632433 - MIR SINE MIR -29 233 16 228 344 117 0 chr5 97999429 97999557 -101630593 + L2 LINE L2 3125 3267 -5 3179 151 84 3 chr5 97999762 98000358 -101629792 + MER73 LTR ERVL 1 644 0 2021 100 3 82 chr5 98000682 98001001 -101629149 + AluSx SINE Alu 1 294 -18 913 163 0 0 chr5 98001044 98001191 -101628959 + FRAM SINE Alu 5 151 -15 355 187 271 52 chr5 98002568 98002723 -101627427 - MER53 DNA DNA 0 189 1 433 300 0 50 chr5 98004303 98004463 -101625687 + MIR SINE MIR 100 251 -11 455 263 60 8 chr5 98004656 98004789 -101625361 + MIR SINE MIR 12 151 -111 383 169 57 0 chr5 98006241 98006365 -101623785 + (TA)n Simple_repeat Simple_repeat 1 131 0 238 320 64 39 chr5 98007403 98007481 -101622669 - L2 LINE L2 -56 3216 3137 191 362 29 0 chr5 98009613 98009682 -101620468 + MIR SINE MIR 77 147 -61 411 283 71 18 chr5 98009690 98009842 -101620308 + MIR SINE MIR 38 188 -51 33 100 0 0 chr5 98010629 98010739 -101619411 + AT_rich Low_complexity Low_complexity 1 110 0 554 229 36 54 chr5 98010808 98010974 -101619176 + L2 LINE L2 3151 3313 0 527 319 105 30 chr5 98011386 98011690 -101618460 - L3 LINE CR1 -189 1388 1062 21 0 0 0 chr5 98011881 98011902 -101618248 + AT_rich Low_complexity Low_complexity 1 21 0 407 295 109 0 chr5 98013079 98013235 -101616915 + MIR SINE MIR 2 174 -88 236 254 15 15 chr5 98013491 98013558 -101616592 + MLT1H LTR MaLR 1 67 -482 591 211 178 6 chr5 98013683 98013863 -101616287 + MLT1H LTR MaLR 339 549 0 326 353 35 13 chr5 98013883 98014090 -101616060 + MIR SINE MIR 3 212 -42 2322 61 7 0 chr5 98014121 98014429 -101615721 - AluY SINE Alu 0 310 1 21 36 0 0 chr5 98014439 98014467 -101615683 + AT_rich Low_complexity Low_complexity 1 28 0 1949 145 0 3 chr5 98015036 98015325 -101614825 + AluJo SINE Alu 1 288 -24 295 234 151 13 chr5 98015421 98015559 -101614591 - MIR SINE MIR -61 147 5 442 291 39 39 chr5 98017328 98017507 -101612643 + MER20 DNA MER1_type 20 198 -21 234 176 0 0 chr5 98022147 98022198 -101607952 + A-rich Low_complexity Low_complexity 1 51 0 994 165 13 0 chr5 98022321 98022479 -101607671 + FAM SINE Alu 13 172 -13 2328 204 72 40 chr5 98022486 98022588 -101607562 + L1MB7 LINE L1 4991 5088 -1078 261 0 0 0 chr5 98022588 98022617 -101607533 + (TC)n Simple_repeat Simple_repeat 2 30 0 2328 204 72 40 chr5 98022617 98023322 -101606828 + L1MB7 LINE L1 5088 5818 -348 602 155 46 18 chr5 98023326 98023563 -101606587 + AluJ SINE Alu 22 300 -12 875 173 75 0 chr5 98023568 98023774 -101606376 + L1MB7 LINE L1 5828 6049 -125 524 196 0 0 chr5 98023764 98023866 -101606284 + L1MB8 LINE L1 6067 6168 -10 * 206 293 17 26 chr5 98025854 98025970 -101604180 + (TATATG)n Simple_repeat Simple_repeat 5 119 0 31 0 0 0 chr5 98026209 98026240 -101603910 + AT_rich Low_complexity Low_complexity 1 31 0 2134 81 7 21 chr5 98026814 98027139 -101603011 + AluSg SINE Alu 1 321 0 1151 281 95 12 chr5 98027537 98027936 -101602214 + MLT1K LTR MaLR 44 475 -113 252 324 56 0 chr5 98028048 98028156 -101601994 + MER5B DNA MER1_type 64 177 -1 2004 113 3 11 chr5 98028770 98029122 -101601028 - AluSx SINE Alu 0 350 1 560 297 68 5 chr5 98030572 98030791 -101599359 - MIR SINE MIR -9 253 21 359 261 76 45 chr5 98031288 98031357 -101598793 - MIR SINE MIR 0 262 197 1207 232 0 8 chr5 98031357 98031598 -101598552 + MER8 DNA MER2_type 1 239 0 359 261 76 45 chr5 98031598 98031685 -101598465 - MIR SINE MIR -65 197 101 261 77 26 0 chr5 98031685 98031724 -101598426 - MADE1 DNA Mariner 0 80 41 20688 94 8 15 chr5 98031758 98035576 -101594574 - L1PA7 LINE L1 -7 6462 2665 12371 104 20 64 chr5 98036423 98039116 -101591034 - L1PA7 LINE L1 -3783 2678 8 267 50 25 0 chr5 98039136 98039176 -101590974 + MADE1 DNA Mariner 40 80 0 190 231 264 2 chr5 98039181 98039264 -101590886 - MIR SINE MIR -110 98 9 24 0 0 0 chr5 98040094 98040118 -101590032 + AT_rich Low_complexity Low_complexity 1 24 0 342 0 0 0 chr5 98042301 98042339 -101587811 + (CA)n Simple_repeat Simple_repeat 2 39 0 2115 113 22 19 chr5 98044497 98044808 -101585342 - AluSq SINE Alu -1 312 1 327 320 59 7 chr5 98044951 98045104 -101585046 - MIR SINE MIR -14 248 88 213 221 295 25 chr5 98045170 98045292 -101584858 + MIR SINE MIR 94 248 -14 2322 71 0 0 chr5 98045414 98045719 -101584431 + AluY SINE Alu 1 305 0 1375 95 0 0 chr5 98045719 98045898 -101584252 + AluSg/x SINE Alu 131 309 -3 841 298 4 28 chr5 98046757 98046787 -101583363 + MIR SINE MIR 3 32 -230 1975 140 0 10 chr5 98046787 98047095 -101583055 + AluJo SINE Alu 1 305 -7 841 298 4 28 chr5 98047095 98047312 -101582838 + MIR SINE MIR 32 244 -18 228 310 0 42 chr5 98048352 98048423 -101581727 + L2 LINE L2 3246 3313 0 23 0 0 0 chr5 98049259 98049282 -101580868 + AT_rich Low_complexity Low_complexity 1 23 0 537 312 101 0 chr5 98049413 98049602 -101580548 + MIR SINE MIR 49 256 -6 288 269 57 29 chr5 98050300 98050413 -101579737 + MIR SINE MIR 21 146 -62 180 256 93 0 chr5 98050680 98050723 -101579427 + MIR SINE MIR 199 245 -17 22 56 0 0 chr5 98052753 98052789 -101577361 + AT_rich Low_complexity Low_complexity 1 36 0 226 317 42 60 chr5 98052964 98053131 -101577019 + MER117 DNA MER1_type 3 166 -31 2324 103 3 0 chr5 98053712 98054023 -101576127 + AluSx SINE Alu 1 312 0 220 256 0 64 chr5 98054486 98054564 -101575586 + T-rich Low_complexity Low_complexity 2 74 0 186 214 0 24 chr5 98054599 98054641 -101575509 + MER5B DNA MER1_type 1 41 -137 5593 126 21 20 chr5 98054641 98054830 -101575320 + L1PA15 LINE L1 5115 5302 -863 2326 126 20 3 chr5 98054830 98055188 -101574962 - THE1B LTR MaLR 0 364 1 5593 126 21 20 chr5 98055188 98055224 -101574926 + L1PA15 LINE L1 5302 5336 -829 1838 164 3 22 chr5 98055224 98055542 -101574608 - AluJb SINE Alu 0 312 1 5593 126 21 20 chr5 98055542 98056344 -101573806 + L1PA15 LINE L1 5336 6143 -22 241 302 0 35 chr5 98056357 98056443 -101573707 + MER5B DNA MER1_type 29 111 -67 371 145 12 0 chr5 98056454 98056537 -101573613 + (TG)n Simple_repeat Simple_repeat 1 84 0 730 253 22 6 chr5 98056586 98056768 -101573382 + MER5A DNA MER1_type 1 185 -4 215 243 432 0 chr5 98056804 98056915 -101573235 + MER5A DNA MER1_type 31 189 0 333 0 0 0 chr5 98057338 98057375 -101572775 + (TG)n Simple_repeat Simple_repeat 2 38 0 222 37 0 0 chr5 98057374 98057401 -101572749 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 28 48 0 0 chr5 98058465 98058507 -101571643 + AT_rich Low_complexity Low_complexity 1 42 0 273 353 20 0 chr5 98059111 98059213 -101570937 + L2 LINE L2 2946 3049 -223 21 0 0 0 chr5 98064333 98064354 -101565796 + AT_rich Low_complexity Low_complexity 1 21 0 239 278 200 0 chr5 98068368 98068458 -101561692 + MIR3 SINE MIR 96 203 -5 1681 148 30 0 chr5 98068984 98069289 -101560861 + L1MA5 LINE L1 5985 6298 -2 675 148 58 97 chr5 98070378 98070533 -101559617 + MER106B DNA MER1_type 1 149 -910 836 189 57 11 chr5 98075469 98075644 -101554506 + MIR SINE MIR 80 262 0 246 381 41 0 chr5 98075927 98076024 -101554126 - L2 LINE L2 -22 3250 3150 266 0 29 0 chr5 98078645 98078679 -101551471 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 23 33 0 0 chr5 98078811 98078841 -101551309 + AT_rich Low_complexity Low_complexity 1 30 0 230 71 0 48 chr5 98079927 98079969 -101550181 + (GAAA)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr5 98084126 98084154 -101545996 + AT_rich Low_complexity Low_complexity 1 28 0 997 254 169 26 chr5 98084657 98085359 -101544791 - L2 LINE L2 -1 3312 2501 270 353 12 0 chr5 98086621 98086706 -101543444 - L2 LINE L2 -86 3186 3101 563 225 121 6 chr5 98088173 98088346 -101541804 - MER20B DNA MER1_type -2 781 589 811 262 110 71 chr5 98088347 98088914 -101541236 - L2 LINE L2 0 3313 2737 517 263 129 30 chr5 98088946 98089178 -101540972 - MER20B DNA MER1_type -528 255 1 664 157 151 6 chr5 98089186 98089352 -101540798 - Charlie1 DNA MER1_type 0 2761 2572 1004 199 6 0 chr5 98089356 98089527 -101540623 - Charlie1 DNA MER1_type -2585 176 5 474 328 64 42 chr5 98090300 98090565 -101539585 - L3 LINE CR1 -1 1576 1306 292 325 78 19 chr5 98090741 98090895 -101539255 + LTR67 LTR ERVL 99 261 -296 229 234 31 0 chr5 98091019 98091083 -101539067 + LTR67 LTR ERVL 442 507 -50 255 297 0 22 chr5 98091143 98091234 -101538916 - L3 LINE CR1 -286 1291 1203 632 247 22 91 chr5 98091257 98091488 -101538662 + MIR SINE MIR 48 262 0 185 246 53 18 chr5 98091569 98091626 -101538524 - L3 LINE CR1 -454 1123 1065 734 344 141 12 chr5 98091693 98092196 -101537954 - L3 LINE CR1 -630 947 380 186 189 0 0 chr5 98094754 98094791 -101535359 + CT-rich Low_complexity Low_complexity 2 38 0 23 0 0 0 chr5 98097489 98097512 -101532638 + AT_rich Low_complexity Low_complexity 1 23 0 2163 99 0 10 chr5 98098997 98099290 -101530860 + AluSg1 SINE Alu 1 290 -19 297 0 0 0 chr5 98099441 98099474 -101530676 + (CA)n Simple_repeat Simple_repeat 1 33 0 1292 217 36 30 chr5 98099691 98099995 -101530155 - AluJo SINE Alu -6 306 1 369 0 0 0 chr5 98101438 98101479 -101528671 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 234 304 49 39 chr5 98106426 98106528 -101523622 + MER102a DNA MER1_type 228 330 0 341 333 49 7 chr5 98106528 98106672 -101523478 - MIR3 SINE MIR -56 152 3 1467 147 35 73 chr5 98106741 98107054 -101523096 - AluJb SINE Alu -11 301 1 1965 139 0 27 chr5 98107060 98107355 -101522795 - AluSx SINE Alu -25 287 1 987 157 20 20 chr5 98107369 98107566 -101522584 - L1PA14 LINE L1 -9 6152 5956 376 254 16 40 chr5 98108448 98108574 -101521576 + MIR SINE MIR 18 140 -68 254 333 167 0 chr5 98109970 98110072 -101520078 + L2 LINE L2 3138 3256 -16 181 294 88 0 chr5 98110239 98110307 -101519843 - L2 LINE L2 0 3313 3240 310 302 47 16 chr5 98110392 98110520 -101519630 + MIR SINE MIR 21 147 -65 2448 99 8 8 chr5 98110747 98111111 -101519039 - THE1B LTR MaLR 0 364 1 1935 252 122 29 chr5 98111510 98112275 -101517875 + Charlie7 DNA MER1_type 26 861 -1751 306 280 136 32 chr5 98113927 98114052 -101516098 + MIR SINE MIR 14 151 -111 3133 272 95 21 chr5 98114507 98115893 -101514257 - L2 LINE L2 -11 3302 1815 1951 133 0 3 chr5 98115893 98116193 -101513957 + AluJb SINE Alu 1 299 -13 22 35 0 0 chr5 98116331 98116360 -101513790 + AT_rich Low_complexity Low_complexity 1 29 0 210 300 0 50 chr5 98117727 98117787 -101512363 - L2 LINE L2 -100 3172 3116 26 0 0 0 chr5 98118209 98118235 -101511915 + AT_rich Low_complexity Low_complexity 1 26 0 229 263 35 0 chr5 98119635 98119692 -101510458 - MIR SINE MIR -63 145 87 233 303 22 0 chr5 98119801 98119890 -101510260 + L1MC4 LINE L1 6613 6703 -1339 294 194 0 0 chr5 98119891 98119953 -101510197 + (TA)n Simple_repeat Simple_repeat 1 62 0 2027 150 129 3 chr5 98121023 98121403 -101508747 + MSTA LTR MaLR 1 428 0 229 233 10 58 chr5 98121443 98121546 -101508604 + (TTA)n Simple_repeat Simple_repeat 2 99 0 521 263 39 39 chr5 98121564 98121720 -101508430 - MIR SINE MIR -14 248 93 1992 95 0 28 chr5 98121868 98122151 -101507999 + AluSc SINE Alu 35 309 0 334 306 81 25 chr5 98122166 98122326 -101507824 - MIR SINE MIR -19 243 75 52 41 0 0 chr5 98122775 98122848 -101507302 + AT_rich Low_complexity Low_complexity 1 73 0 1390 137 39 143 chr5 98123393 98123729 -101506421 - AluJo SINE Alu 0 302 2 209 198 111 62 chr5 98124857 98124938 -101505212 - MIR SINE MIR -72 190 106 206 226 65 0 chr5 98125993 98126055 -101504095 + MIR SINE MIR 67 132 -130 792 224 17 6 chr5 98126393 98126567 -101503583 + MER5A DNA MER1_type 8 183 -6 204 320 60 10 chr5 98127171 98127271 -101502879 - MER5B DNA MER1_type -72 106 2 383 332 10 0 chr5 98128546 98128680 -101501470 - MIR SINE MIR -63 145 11 2212 60 3 3 chr5 98130151 98130479 -101499671 + AluY SINE Alu 1 328 0 2107 103 7 3 chr5 98132186 98132478 -101497672 - AluSp SINE Alu -20 293 1 216 0 0 0 chr5 98132688 98132712 -101497438 + (A)n Simple_repeat Simple_repeat 1 24 0 219 219 0 0 chr5 98134874 98134915 -101495235 + (CAA)n Simple_repeat Simple_repeat 2 42 0 2443 59 0 3 chr5 98135095 98135398 -101494752 - AluY SINE Alu -9 302 1 204 158 0 0 chr5 98136344 98136382 -101493768 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 306 0 0 0 chr5 98137899 98137933 -101492217 + (CA)n Simple_repeat Simple_repeat 2 35 0 46 62 0 0 chr5 98139870 98139951 -101490199 + AT_rich Low_complexity Low_complexity 1 81 0 2375 102 0 0 chr5 98139957 98140262 -101489888 - AluSx SINE Alu -6 306 2 225 0 0 0 chr5 98141903 98141928 -101488222 + (A)n Simple_repeat Simple_repeat 1 25 0 222 150 0 0 chr5 98143062 98143102 -101487048 + (CAT)n Simple_repeat Simple_repeat 2 41 0 27 49 0 0 chr5 98143874 98143915 -101486235 + AT_rich Low_complexity Low_complexity 1 41 0 22 56 0 0 chr5 98147246 98147282 -101482868 + AT_rich Low_complexity Low_complexity 1 36 0 760 342 58 48 chr5 98147673 98148417 -101481733 + L2 LINE L2 2499 3253 -19 21 82 0 0 chr5 98149932 98149981 -101480169 + AT_rich Low_complexity Low_complexity 1 49 0 273 233 44 22 chr5 98150212 98150302 -101479848 - L1MC4 LINE L1 -1337 6705 6614 209 180 20 0 chr5 98150305 98150355 -101479795 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 243 319 88 9 chr5 98151237 98151350 -101478800 - L3b LINE CR1 -59 1524 1403 202 287 57 82 chr5 98151712 98151834 -101478316 + L2 LINE L2 3186 3304 -9 470 291 153 32 chr5 98152770 98153148 -101477002 - L2 LINE L2 -86 3227 2804 552 311 53 19 chr5 98153218 98153427 -101476723 - L2 LINE L2 0 3313 3098 194 323 55 67 chr5 98154598 98154762 -101475388 - MIR SINE MIR -50 212 51 197 348 135 0 chr5 98154798 98154887 -101475263 - L2 LINE L2 -8 3305 3205 681 259 127 47 chr5 98155197 98155820 -101474330 - L2 LINE L2 0 3313 1957 207 0 0 0 chr5 98157242 98157265 -101472885 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 456 19 0 0 chr5 98157264 98157317 -101472833 + (GA)n Simple_repeat Simple_repeat 2 54 0 1478 161 7 29 chr5 98157324 98157597 -101472553 - AluJo SINE Alu -34 278 12 338 270 36 133 chr5 98158345 98158541 -101471609 - MER5B DNA MER1_type -1 177 1 25 65 0 0 chr5 98159811 98159857 -101470293 + AT_rich Low_complexity Low_complexity 1 46 0 310 195 0 39 chr5 98160185 98160313 -101469837 + (TA)n Simple_repeat Simple_repeat 1 123 0 2178 82 24 3 chr5 98160360 98160652 -101469498 + AluY SINE Alu 1 298 -13 1093 224 0 12 chr5 98160654 98160895 -101469255 - L1PB4 LINE L1 -7 6149 5912 2025 148 0 0 chr5 98161578 98161882 -101468268 + AluSx SINE Alu 1 304 -8 26 64 0 0 chr5 98163198 98163245 -101466905 + AT_rich Low_complexity Low_complexity 1 47 0 843 154 16 35 chr5 98163284 98163486 -101466664 + L1PB4 LINE L1 5597 5801 -355 313 217 11 65 chr5 98163486 98163578 -101466572 - L1MC4 LINE L1 -1342 6700 6614 * 336 292 11 0 chr5 98163538 98163627 -101466523 + L1MC4 LINE L1 6614 6703 -1339 329 255 0 21 chr5 98163580 98163674 -101466476 - L1MC4 LINE L1 -1337 6705 6614 * 981 150 0 0 chr5 98163715 98163895 -101466255 + (TA)n Simple_repeat Simple_repeat 1 180 0 2099 153 14 8 chr5 98163895 98164244 -101465906 + L1PB4 LINE L1 5790 6143 -13 31963 110 10 56 chr5 98164658 98171116 -101459034 + L1PA7 LINE L1 9 6153 -1 331 352 10 2 chr5 98171116 98171236 -101458914 - MIR SINE MIR -80 128 9 395 372 37 5 chr5 98171337 98171528 -101458622 - L3b LINE CR1 -117 1466 1270 696 200 47 0 chr5 98171541 98171691 -101458459 - L1PB1 LINE L1 -794 5352 5196 * 2741 137 11 7 chr5 98171683 98172135 -101458015 + L1PB1 LINE L1 5342 5795 -356 210 114 43 57 chr5 98172135 98172190 -101457960 + (TA)n Simple_repeat Simple_repeat 1 56 -13 2658 72 13 16 chr5 98172190 98172565 -101457585 + L1PB1 LINE L1 5777 6150 -1 210 114 43 57 chr5 98172565 98172579 -101457571 + (TA)n Simple_repeat Simple_repeat 56 69 0 877 236 12 79 chr5 98172629 98172883 -101457267 - MLT1A1 LTR MaLR -128 237 1 2885 169 28 12 chr5 98172883 98173875 -101456275 - L1M2 LINE L1 -546 6726 5707 * 2910 231 36 30 chr5 98173870 98174941 -101455209 - L1M2 LINE L1 -3320 3786 2711 719 254 41 62 chr5 98174937 98175279 -101454871 - L1M2 LINE L1 -6432 598 2 * 1071 207 52 95 chr5 98175381 98175748 -101454402 + MLT1A1 LTR MaLR 11 361 -4 206 311 50 85 chr5 98175778 98175938 -101454212 - MIR SINE MIR -98 164 12 382 208 148 0 chr5 98176091 98176192 -101453958 - MIR SINE MIR -74 188 73 2376 86 0 0 chr5 98176201 98176503 -101453647 + AluY SINE Alu 1 302 -9 395 272 190 26 chr5 98176993 98177188 -101452962 - MIR SINE MIR -4 258 32 361 273 93 20 chr5 98177908 98178058 -101452092 + MER103 DNA DNA 1 161 -5 22 35 0 0 chr5 98179628 98179657 -101450493 + AT_rich Low_complexity Low_complexity 1 29 0 234 289 33 11 chr5 98180784 98180874 -101449276 + MIR3 SINE MIR 85 176 -32 23 33 0 0 chr5 98180995 98181025 -101449125 + AT_rich Low_complexity Low_complexity 1 30 0 341 298 48 54 chr5 98181396 98181564 -101448586 + MLT1J2 LTR MaLR 281 447 -3 328 249 114 83 chr5 98182019 98182212 -101447938 + MLT1J LTR MaLR 1 199 -312 22 0 0 0 chr5 98182321 98182343 -101447807 + AT_rich Low_complexity Low_complexity 1 22 0 211 283 0 0 chr5 98182745 98182791 -101447359 + L2 LINE L2 3227 3272 0 325 285 23 54 chr5 98182793 98182923 -101447227 - MIR SINE MIR -109 153 28 249 271 155 70 chr5 98183176 98183305 -101446845 + L2 LINE L2 3172 3311 -2 618 283 96 12 chr5 98183505 98183745 -101446405 + MIR SINE MIR 3 262 0 22 0 0 0 chr5 98183808 98183830 -101446320 + AT_rich Low_complexity Low_complexity 1 22 0 1492 197 11 14 chr5 98183958 98184242 -101445908 + AluJo SINE Alu 7 289 -23 24 32 0 0 chr5 98184326 98184357 -101445793 + AT_rich Low_complexity Low_complexity 1 31 0 1271 199 0 92 chr5 98184894 98185210 -101444940 + MLT1A2 LTR MaLR 1 287 -87 13301 94 12 2 chr5 98185311 98187240 -101442910 + L1P LINE L1 2494 4442 -1704 299 170 0 0 chr5 98187344 98187391 -101442759 + MLT1A2 LTR MaLR 320 366 -8 190 273 167 0 chr5 98187695 98187761 -101442389 + L2 LINE L2 3232 3308 -5 1387 129 5 0 chr5 98188047 98188248 -101441902 + AluSg/x SINE Alu 91 292 -20 198 0 0 0 chr5 98188318 98188340 -101441810 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 5383 165 42 7 chr5 98188592 98190659 -101439491 + L1MB1 LINE L1 3961 6167 -1 701 258 104 47 chr5 98191315 98191679 -101438471 + MLT1J1 LTR MaLR 62 446 0 218 235 98 150 chr5 98192106 98192259 -101437891 - L3 LINE CR1 -1 1576 1432 835 263 217 9 chr5 98193237 98193704 -101436446 - L2 LINE L2 0 3313 2760 24 77 0 0 chr5 98194000 98194052 -101436098 + AT_rich Low_complexity Low_complexity 1 52 0 1782 245 91 28 chr5 98194241 98194404 -101435746 + MLT1E2 LTR MaLR 1 152 -474 1946 128 17 7 chr5 98194404 98194702 -101435448 + AluSx SINE Alu 11 311 -1 1782 245 91 28 chr5 98194702 98195148 -101435002 + MLT1E2 LTR MaLR 152 624 -2 665 226 0 0 chr5 98195311 98195426 -101434724 + FLAM_C SINE Alu 1 115 -18 372 119 0 0 chr5 98195427 98195486 -101434664 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 378 271 41 8 chr5 98195602 98195724 -101434426 - MLT1J LTR MaLR -383 128 3 276 290 123 75 chr5 98195765 98196058 -101434092 - L3 LINE CR1 -174 1403 1097 2138 128 0 3 chr5 98198292 98198598 -101431552 - AluSx SINE Alu -7 305 1 1160 227 123 7 chr5 98198644 98198952 -101431198 + MER2 DNA MER2_type 1 344 0 356 272 0 0 chr5 98198952 98199033 -101431117 - MIR SINE MIR -16 246 166 2090 125 46 27 chr5 98200486 98200854 -101429296 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr5 98200866 98200896 -101429254 + AT_rich Low_complexity Low_complexity 1 30 0 831 137 0 0 chr5 98200896 98201013 -101429137 - FLAM_C SINE Alu -21 122 6 518 147 181 9 chr5 98201109 98201225 -101428925 - MLT1E1 LTR MaLR -3 590 488 498 224 0 0 chr5 98201239 98201324 -101428826 + MER21B LTR ERV1 12 96 -767 3144 235 46 11 chr5 98201331 98202096 -101428054 + MER21B LTR ERV1 19 810 -53 1474 222 202 3 chr5 98202123 98202552 -101427598 - MLT1E1 LTR MaLR -140 514 1 2319 84 0 10 chr5 98203393 98203692 -101426458 + AluSq SINE Alu 15 310 -3 279 93 0 0 chr5 98204066 98204109 -101426041 + (ATG)n Simple_repeat Simple_repeat 3 45 0 307 290 60 0 chr5 98204122 98204222 -101425928 - MIR SINE MIR -20 242 137 476 276 108 47 chr5 98204268 98204682 -101425468 + LTR16C LTR ERVL 1 489 -2 236 269 46 56 chr5 98205418 98205526 -101424624 + LTR40b LTR ERVL 203 309 -153 246 282 14 0 chr5 98205530 98205601 -101424549 - LTR68 LTR ERV1 -668 72 1 2260 145 34 28 chr5 98206594 98207141 -101423009 + MLT2A2 LTR ERVL 1 553 -1 800 172 0 0 chr5 98207178 98207300 -101422850 - MER5A DNA MER1_type -2 187 66 21 36 0 0 chr5 98207945 98207973 -101422177 + AT_rich Low_complexity Low_complexity 1 28 0 1857 145 62 3 chr5 98208397 98208721 -101421429 + MER2 DNA MER2_type 2 344 0 557 207 18 0 chr5 98209035 98209146 -101421004 - L1MC1 LINE L1 -13 6320 6208 1022 222 163 0 chr5 98209168 98209438 -101420712 + LTR48 LTR ERV1 70 383 -404 305 241 9 46 chr5 98209622 98209730 -101420420 + MER39 LTR ERV1 601 704 -3 541 188 10 0 chr5 98209737 98209838 -101420312 - L1MC1 LINE L1 -113 6220 6119 1459 219 3 0 chr5 98210691 98210978 -101419172 + LTR51 LTR ERV1 227 514 -157 269 230 14 14 chr5 98211639 98211713 -101418437 + MER31-int LTR ERV1 3656 3729 -1207 5021 141 63 3 chr5 98212119 98213003 -101417147 + Tigger3b DNA MER2_type 1 938 -293 1814 153 70 25 chr5 98213003 98213362 -101416788 + THE1C LTR MaLR 1 375 0 10061 105 32 44 chr5 98213362 98214961 -101415189 + THE1C-int LTR MaLR 1 1580 0 2092 106 70 25 chr5 98214961 98215320 -101414830 + THE1C LTR MaLR 1 375 0 1809 157 14 0 chr5 98215320 98215613 -101414537 + Tigger3b DNA MER2_type 933 1229 -2 978 140 112 17 chr5 98215745 98215923 -101414227 + MSTA LTR MaLR 234 428 0 8958 181 27 3 chr5 98215923 98217530 -101412620 + MSTA-int LTR MaLR 1 1646 -5 1691 161 138 34 chr5 98217539 98217924 -101412226 + MSTA LTR MaLR 4 428 0 2208 131 64 13 chr5 98217924 98218297 -101411853 - MER6A DNA MER2_type -212 393 2 293 185 22 43 chr5 98218322 98218414 -101411736 - L1MC4 LINE L1 -1339 6703 6614 210 222 0 0 chr5 98218414 98218468 -101411682 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 441 208 10 20 chr5 98218936 98219037 -101411113 + MER94 DNA DNA 27 126 -8 2444 84 65 11 chr5 98219038 98219394 -101410756 - THE1C LTR MaLR 0 375 1 236 316 21 11 chr5 98219409 98219504 -101410646 + L1MEd LINE L1 129 224 -5895 236 330 97 22 chr5 98220153 98220380 -101409770 + MER41B LTR ERV1 158 401 -234 1047 179 64 61 chr5 98220655 98220951 -101409199 + MLT1C LTR MaLR 1 297 -170 247 315 14 0 chr5 98421089 98421162 -101208988 - MIR SINE MIR -102 106 33 188 350 50 67 chr5 98421306 98421426 -101208724 - L2 LINE L2 -2 3270 3153 24 32 0 0 chr5 98421997 98422028 -101208122 + AT_rich Low_complexity Low_complexity 1 31 0 1567 181 29 4 chr5 98422028 98422309 -101207841 - AluJo SINE Alu -24 288 1 416 39 0 0 chr5 98423235 98423286 -101206864 - AluY SINE Alu -17 294 244 238 307 57 11 chr5 98423720 98423808 -101206342 - L2 LINE L2 -5 3267 3176 340 160 0 0 chr5 98424017 98424067 -101206083 - AluJo SINE Alu -30 272 223 1099 165 11 0 chr5 98424067 98424249 -101205901 - AluJo SINE Alu -128 184 1 624 250 42 47 chr5 98424528 98424764 -101205386 + MER112 DNA MER1_type 2 236 -24 272 323 43 38 chr5 98424903 98425089 -101205061 - L2 LINE L2 -816 2498 2312 231 222 32 0 chr5 98425416 98425479 -101204671 + L1ME3A LINE L1 5755 5819 -343 276 160 0 0 chr5 98425503 98425553 -101204597 + L1ME3A LINE L1 5893 5942 -228 22 0 0 0 chr5 98425584 98425606 -101204544 + AT_rich Low_complexity Low_complexity 1 22 0 733 230 148 72 chr5 98427164 98427637 -101202513 - L1ME4a LINE L1 -136 5985 5477 22 35 0 0 chr5 98427909 98427938 -101202212 + AT_rich Low_complexity Low_complexity 1 29 0 234 0 0 0 chr5 98428928 98428954 -101201196 + (T)n Simple_repeat Simple_repeat 1 26 0 797 279 45 0 chr5 98429396 98429618 -101200532 - MIR SINE MIR -10 252 21 180 97 0 0 chr5 98430940 98430971 -101199179 + (T)n Simple_repeat Simple_repeat 1 31 0 250 278 70 164 chr5 98431129 98431196 -101198954 - L2 LINE L2 -8 3264 3192 2409 78 0 0 chr5 98431196 98431491 -101198659 + AluSg SINE Alu 1 295 -15 250 278 70 164 chr5 98431491 98431765 -101198385 - L2 LINE L2 -80 3192 2955 396 302 0 9 chr5 98432904 98433010 -101197140 + (TATATG)n Simple_repeat Simple_repeat 1 105 0 284 271 0 44 chr5 98433138 98433319 -101196831 + (TATG)n Simple_repeat Simple_repeat 4 176 0 257 275 0 45 chr5 98433357 98433535 -101196615 + (TATG)n Simple_repeat Simple_repeat 4 173 0 235 231 0 0 chr5 98433536 98433588 -101196562 + L1MC4 LINE L1 6653 6704 -1338 502 265 159 0 chr5 98433592 98433762 -101196388 + L2 LINE L2 2417 2613 -701 422 226 47 19 chr5 98433776 98433882 -101196268 + L2 LINE L2 3205 3313 0 21 0 0 0 chr5 98434420 98434441 -101195709 + AT_rich Low_complexity Low_complexity 1 21 0 303 177 81 0 chr5 98435161 98435223 -101194927 - MER103 DNA DNA -89 77 11 622 251 51 17 chr5 98435334 98435509 -101194641 - L2 LINE L2 -5 3308 3128 192 254 198 71 chr5 98435523 98435649 -101194501 + MIR3 SINE MIR 42 183 -25 23 33 0 0 chr5 98436353 98436383 -101193767 + AT_rich Low_complexity Low_complexity 1 30 0 853 160 0 0 chr5 98437698 98437829 -101192321 - FLAM_C SINE Alu -2 131 1 702 185 266 0 chr5 98437873 98438046 -101192104 - MER20 DNA MER1_type 0 219 1 2273 79 10 0 chr5 98438570 98438860 -101191290 + AluY SINE Alu 1 293 -18 294 176 0 0 chr5 98439715 98439766 -101190384 - L2 LINE L2 0 3313 3263 221 344 57 25 chr5 98440268 98440390 -101189760 - L2 LINE L2 -13 3259 3134 1494 67 0 39 chr5 98440421 98440681 -101189469 + AluSg/x SINE Alu 98 309 0 198 324 105 19 chr5 98441637 98441742 -101188408 - L2 LINE L2 0 3313 3200 186 43 0 0 chr5 98442037 98442060 -101188090 + (A)n Simple_repeat Simple_repeat 1 23 0 742 199 55 20 chr5 98442598 98442799 -101187351 - MER3 DNA MER1_type 0 209 2 312 321 191 30 chr5 98442799 98442967 -101187183 - MIR3 SINE MIR -2 206 12 370 326 205 35 chr5 98444252 98445464 -101184686 + L2 LINE L2 1814 3271 -1 2354 80 3 0 chr5 98445538 98445825 -101184325 + AluSc SINE Alu 1 288 -21 1838 159 30 0 chr5 98446071 98446366 -101183784 - AluJb SINE Alu -8 304 1 31 0 0 0 chr5 98446541 98446572 -101183578 + AT_rich Low_complexity Low_complexity 1 31 0 453 265 88 19 chr5 98449034 98449249 -101180901 - L3b LINE CR1 -247 1336 1107 2253 83 0 33 chr5 98449291 98449593 -101180557 + AluSc SINE Alu 1 292 -17 421 254 40 16 chr5 98449854 98449980 -101180170 - MIR SINE MIR 0 262 134 259 255 78 69 chr5 98450726 98450828 -101179322 + MIR3 SINE MIR 95 197 -11 209 271 21 0 chr5 98452420 98452468 -101177682 - L2 LINE L2 -73 3199 3151 300 282 127 0 chr5 98452614 98452724 -101177426 + MIR SINE MIR 117 240 -22 204 40 0 0 chr5 98453568 98453593 -101176557 + (TTGG)n Simple_repeat Simple_repeat 2 26 0 180 0 0 0 chr5 98453639 98453659 -101176491 + (TA)n Simple_repeat Simple_repeat 2 21 0 204 111 0 0 chr5 98455645 98455681 -101174469 + (TA)n Simple_repeat Simple_repeat 1 36 0 524 272 68 12 chr5 98455787 98455949 -101174201 + MER5B DNA MER1_type 8 178 0 361 265 10 0 chr5 98455973 98456075 -101174075 - MIR SINE MIR 0 262 160 443 229 115 0 chr5 98456630 98456752 -101173398 - L2 LINE L2 0 3313 3178 1121 286 43 54 chr5 98456945 98457408 -101172742 - L2 LINE L2 -798 2516 2059 2282 97 0 37 chr5 98457408 98457729 -101172421 + AluSg SINE Alu 1 309 -1 1121 286 43 54 chr5 98457729 98457825 -101172325 - L2 LINE L2 -1255 2059 1963 1863 156 10 29 chr5 98457856 98458170 -101171980 + AluJb SINE Alu 5 312 0 1477 194 28 0 chr5 98458886 98459134 -101171016 + Tigger7 DNA MER2_type 1 255 -478 417 178 0 0 chr5 98459132 98459205 -101170945 - Tigger7 DNA MER2_type -407 326 254 * 1892 134 38 3 chr5 98459217 98459530 -101170620 + MER44D DNA MER2_type 227 605 0 458 281 59 49 chr5 98460250 98460453 -101169697 - MIR3 SINE MIR -3 205 1 224 159 58 0 chr5 98461912 98461981 -101168169 + T-rich Low_complexity Low_complexity 4 76 0 2005 88 44 7 chr5 98466682 98466955 -101163195 - AluSq SINE Alu -17 296 14 2412 63 0 3 chr5 98467251 98467550 -101162600 + AluY SINE Alu 1 298 -13 2234 111 0 0 chr5 98468489 98468786 -101161364 + AluSx SINE Alu 1 297 -15 522 221 131 14 chr5 98470857 98471002 -101159148 + MIR SINE MIR 74 235 -27 326 255 248 0 chr5 98471187 98471328 -101158822 - MER104 DNA Tc2 0 180 5 726 238 95 19 chr5 98471501 98471711 -101158439 - L1MC/D LINE L1 -2054 5754 5529 342 263 11 21 chr5 98474161 98474256 -101155894 + MER5A DNA MER1_type 96 189 0 588 169 129 8 chr5 98476174 98476298 -101153852 - MIR SINE MIR -111 151 13 490 330 43 66 chr5 98477643 98478085 -101152065 + L2 LINE L2 2841 3272 0 2129 146 113 20 chr5 98478256 98478391 -101151759 + MSTB LTR MaLR 1 122 -304 198 0 0 0 chr5 98478391 98478413 -101151737 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 2129 146 113 20 chr5 98478413 98478667 -101151483 + MSTB LTR MaLR 122 426 0 277 255 111 7 chr5 98479010 98479163 -101150987 + MIR SINE MIR 9 177 -85 2317 80 0 46 chr5 98479451 98479776 -101150374 - AluSg SINE Alu 0 310 1 190 286 0 0 chr5 98481843 98481892 -101148258 - L2 LINE L2 -44 3228 3180 2590 48 0 7 chr5 98482848 98483157 -101146993 - AluY SINE Alu -4 307 1 2109 127 0 0 chr5 98483303 98483603 -101146547 + AluSx SINE Alu 1 300 -12 760 203 6 19 chr5 98484200 98484358 -101145792 + MER5A DNA MER1_type 6 161 -28 551 243 8 39 chr5 98484373 98484549 -101145601 + MER5B DNA MER1_type 15 175 -3 2269 94 3 3 chr5 98484665 98484962 -101145188 - AluY SINE Alu -14 297 1 2240 91 7 7 chr5 98485211 98485508 -101144642 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 98485634 98485655 -101144495 + AT_rich Low_complexity Low_complexity 1 21 0 1682 185 104 53 chr5 98486274 98486668 -101143482 - MLT1F1 LTR MaLR -10 557 144 379 237 85 8 chr5 98487015 98487133 -101143017 - L2 LINE L2 0 3313 3187 728 227 91 54 chr5 98487187 98487429 -101142721 - MIR SINE MIR -5 257 7 2079 134 13 0 chr5 98487584 98487882 -101142268 + AluSx SINE Alu 1 302 -10 296 111 0 74 chr5 98487894 98487975 -101142175 + (GGAAA)n Simple_repeat Simple_repeat 1 75 0 846 164 89 0 chr5 98488416 98488562 -101141588 - FRAM SINE Alu -2 174 16 261 309 0 0 chr5 98489040 98489121 -101141029 + MIR SINE MIR 176 256 -6 2001 149 7 0 chr5 98489227 98489523 -101140627 + AluSx SINE Alu 1 298 -14 191 152 22 0 chr5 98491001 98491047 -101139103 + (TA)n Simple_repeat Simple_repeat 1 47 0 614 126 151 34 chr5 98491536 98491549 -101138601 - FLAM_C SINE Alu -169 133 123 1835 122 80 11 chr5 98491549 98491835 -101138315 - AluSx SINE Alu -2 310 5 225 0 0 0 chr5 98491836 98491861 -101138289 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 614 126 151 34 chr5 98491861 98491964 -101138186 - FLAM_C SINE Alu -178 124 1 1467 203 135 27 chr5 98492404 98492515 -101137635 + Charlie4a DNA MER1_type 25 123 -1838 2118 174 25 50 chr5 98492515 98492758 -101137392 - MSTB1 LTR MaLR 0 432 203 2224 93 17 7 chr5 98492758 98493047 -101137103 - AluSq SINE Alu -21 292 1 2118 174 25 50 chr5 98493047 98493246 -101136904 - MSTB1 LTR MaLR -229 203 1 1467 203 135 27 chr5 98493246 98493548 -101136602 + Charlie4a DNA MER1_type 123 483 -25 2197 116 0 3 chr5 98494608 98494911 -101135239 + AluSq SINE Alu 1 302 -11 201 213 21 0 chr5 98495159 98495206 -101134944 + (TA)n Simple_repeat Simple_repeat 2 49 0 320 198 0 12 chr5 98496949 98497030 -101133120 + (TA)n Simple_repeat Simple_repeat 2 81 0 202 114 29 0 chr5 98500013 98500048 -101130102 + (CA)n Simple_repeat Simple_repeat 1 36 0 2337 96 30 0 chr5 98500061 98500363 -101129787 - AluSq SINE Alu -2 311 1 620 258 10 38 chr5 98503070 98503279 -101126871 - MIR SINE MIR 0 262 60 213 39 0 0 chr5 98503960 98503986 -101126164 + (A)n Simple_repeat Simple_repeat 1 26 0 1325 167 29 58 chr5 98504834 98505146 -101125004 + L1MC2 LINE L1 6041 6343 -1 2491 70 0 3 chr5 98505741 98506043 -101124107 + AluY SINE Alu 1 301 -10 228 215 103 93 chr5 98506302 98506388 -101123762 + L2 LINE L2 3153 3242 -30 1505 230 104 46 chr5 98506388 98506909 -101123241 + MLT1H1 LTR MaLR 5 555 0 228 215 103 93 chr5 98506909 98506929 -101123221 + L2 LINE L2 3242 3260 -12 282 116 0 0 chr5 98506929 98506972 -101123178 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 420 286 77 108 chr5 98507043 98507564 -101122586 + LTR67 LTR ERVL 2 506 -51 968 109 36 0 chr5 98507678 98507815 -101122335 + AluSg/x SINE Alu 154 295 -14 6922 108 141 121 chr5 98508368 98510030 -101120120 - pTR5 LTR ERV1 0 2438 743 2147 125 10 0 chr5 98510642 98510937 -101119213 + AluSx SINE Alu 1 298 -14 27 62 0 0 chr5 98510974 98511022 -101119128 + AT_rich Low_complexity Low_complexity 1 48 0 281 246 0 29 chr5 98511306 98511375 -101118775 - MIR SINE MIR -24 238 172 258 105 0 0 chr5 98511410 98511448 -101118702 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 2102 135 0 0 chr5 98511504 98511800 -101118350 + AluSx SINE Alu 1 296 -16 433 245 184 20 chr5 98512199 98512346 -101117804 - MIR SINE MIR -79 183 13 24 53 0 0 chr5 98512399 98512437 -101117713 + AT_rich Low_complexity Low_complexity 1 38 0 477 339 56 15 chr5 98512946 98513288 -101116862 - MARNA DNA Mariner -228 358 3 2175 110 0 0 chr5 98514737 98515027 -101115123 - AluSx SINE Alu -22 290 1 254 211 99 0 chr5 98515211 98515282 -101114868 - MIR3 SINE MIR -48 160 83 1908 137 51 43 chr5 98515331 98515703 -101114447 + THE1C LTR MaLR 1 375 0 603 284 71 9 chr5 98516360 98516585 -101113565 - MLT1K LTR MaLR -27 561 323 261 0 0 0 chr5 98517169 98517198 -101112952 + (T)n Simple_repeat Simple_repeat 1 29 0 359 318 61 20 chr5 98517542 98517787 -101112363 - MIR SINE MIR -6 256 2 266 224 13 26 chr5 98519603 98519679 -101110471 + L1ME LINE L1 5748 5822 -299 2112 89 34 0 chr5 98520289 98520582 -101109568 + AluSc SINE Alu 1 303 -6 391 232 42 0 chr5 98521572 98521667 -101108483 - MER5B DNA MER1_type -74 104 6 2126 127 0 13 chr5 98523631 98523947 -101106203 - AluSx SINE Alu 0 312 1 198 71 0 0 chr5 98525228 98525256 -101104894 + (TC)n Simple_repeat Simple_repeat 1 28 0 209 244 58 0 chr5 98525616 98525702 -101104448 + (TA)n Simple_repeat Simple_repeat 1 91 0 1730 62 9 0 chr5 98526103 98526328 -101103822 + AluSc SINE Alu 74 300 -9 301 224 8 149 chr5 98527389 98527523 -101102627 - L1MC/D LINE L1 -2016 5792 5678 320 277 173 79 chr5 98529386 98529588 -101100562 - L1MC4a LINE L1 -1872 5936 5716 201 268 0 0 chr5 98530225 98530266 -101099884 + MIR3 SINE MIR 141 181 -27 392 295 60 18 chr5 98530320 98530486 -101099664 + MIR SINE MIR 21 193 -69 448 305 50 58 chr5 98530654 98530763 -101099387 + MLT1L LTR MaLR 3 111 -504 7747 26 5 0 chr5 98530763 98531765 -101098385 + L1PA3 LINE L1 5150 6155 0 448 305 50 58 chr5 98531765 98531914 -101098236 + MLT1L LTR MaLR 111 259 -356 356 317 29 0 chr5 98532111 98532215 -101097935 + MIR SINE MIR 154 260 -2 214 334 121 86 chr5 98532937 98533251 -101096899 + L2 LINE L2 2945 3269 -3 320 326 121 58 chr5 98533279 98533636 -101096514 - L2 LINE L2 -52 3220 2887 2829 128 2 34 chr5 98533636 98533986 -101096164 - MER61B LTR ERV1 0 425 90 2001 109 0 11 chr5 98533986 98534271 -101095879 - AluSq SINE Alu -3 310 29 2829 128 2 34 chr5 98534271 98534356 -101095794 - MER61B LTR ERV1 -335 90 4 320 326 121 58 chr5 98534356 98534470 -101095680 - L2 LINE L2 -385 2887 2782 1924 121 7 0 chr5 98534470 98534778 -101095372 - AluSg SINE Alu 0 310 1 320 326 121 58 chr5 98534778 98535494 -101094656 - L2 LINE L2 -490 2782 1936 2558 49 0 0 chr5 98535556 98535860 -101094290 + AluY SINE Alu 1 304 -7 587 282 65 25 chr5 98537528 98537773 -101092377 - MER102a DNA MER1_type 0 330 76 311 281 109 8 chr5 98539107 98539235 -101090915 + MIR3 SINE MIR 35 175 -33 714 203 17 51 chr5 98539766 98539889 -101090261 + MER5B DNA MER1_type 1 118 -60 1922 112 52 0 chr5 98539889 98540176 -101089974 - AluSq SINE Alu -9 304 3 714 203 17 51 chr5 98540176 98540229 -101089921 + MER5B DNA MER1_type 118 171 -7 1756 126 100 0 chr5 98540305 98540576 -101089574 - AluSq SINE Alu -15 298 1 1867 138 7 3 chr5 98540636 98540932 -101089218 - AluJo SINE Alu -5 307 11 2431 62 3 0 chr5 98541089 98541394 -101088756 - AluY SINE Alu -5 306 1 1036 156 35 20 chr5 98541542 98541741 -101088409 - L1MCa LINE L1 -4507 1919 1718 1286 242 114 28 chr5 98541741 98542428 -101087722 - L2 LINE L2 -13 3300 2552 1685 164 0 4 chr5 98543605 98543880 -101086270 - AluJb SINE Alu -38 274 1 753 280 170 19 chr5 98544706 98545167 -101084983 - L2 LINE L2 -5 3308 2750 218 262 0 0 chr5 98547386 98547428 -101082722 - MER91 DNA MER1_type 0 140 99 2068 118 0 0 chr5 98547768 98548057 -101082093 + AluSg SINE Alu 1 289 -21 496 185 31 31 chr5 98548921 98549051 -101081099 - HAL1 LINE L1 -628 1879 1750 4834 155 23 41 chr5 98549085 98550058 -101080092 - LTR5 LTR ERVK -14 955 1 504 285 26 57 chr5 98550164 98550357 -101079793 - MLT1J LTR MaLR -312 199 13 566 248 22 15 chr5 98550408 98550545 -101079605 - HAL1 LINE L1 -1616 891 754 698 252 168 19 chr5 98550555 98550661 -101079489 + L2 LINE L2 3013 3102 -211 1602 145 6 86 chr5 98550661 98550999 -101079151 - AluSx SINE Alu -1 311 1 698 252 168 19 chr5 98550999 98551154 -101078996 + L2 LINE L2 3102 3313 0 301 309 141 16 chr5 98551177 98551368 -101078782 - HAL1 LINE L1 -1762 745 531 1861 163 0 3 chr5 98553219 98553520 -101076630 - AluSx SINE Alu -12 300 1 22 70 0 0 chr5 98553650 98553693 -101076457 + AT_rich Low_complexity Low_complexity 1 43 0 968 92 7 65 chr5 98554021 98554174 -101075976 + AluSx SINE Alu 32 175 -137 1805 135 3 52 chr5 98554617 98554753 -101075397 + AluSx SINE Alu 1 142 -170 2172 92 0 13 chr5 98554753 98555059 -101075091 + AluSx SINE Alu 1 302 -10 1805 135 3 52 chr5 98555059 98555249 -101074901 + AluSx SINE Alu 142 311 -1 292 241 46 0 chr5 98555384 98555471 -101074679 + MER103 DNA DNA 68 158 -8 2383 138 3 6 chr5 98555619 98555982 -101074168 + MLT1A1 LTR MaLR 4 365 0 441 294 117 52 chr5 98556082 98556544 -101073606 - Tigger4(Zombi) DNA MER2_type -1042 1689 1198 210 191 0 0 chr5 98556572 98556614 -101073536 + CT-rich Low_complexity Low_complexity 2 43 0 250 324 72 24 chr5 98556716 98556841 -101073309 + MIR SINE MIR 27 156 -106 21 36 0 0 chr5 98556841 98556869 -101073281 + AT_rich Low_complexity Low_complexity 1 28 0 343 279 171 0 chr5 98557329 98557469 -101072681 + MIR SINE MIR 28 191 -71 651 276 52 30 chr5 98557489 98557721 -101072429 - MIR SINE MIR -11 251 15 185 333 0 0 chr5 98558171 98558222 -101071928 - L2 LINE L2 -7 3265 3215 1727 144 56 0 chr5 98558432 98558716 -101071434 + AluSx SINE Alu 1 300 -12 3042 200 45 10 chr5 98559647 98560263 -101069887 - LTR9B LTR ERV1 0 644 7 763 167 5 176 chr5 98560769 98560929 -101069221 + MER5A DNA MER1_type 5 191 2 2356 73 3 0 chr5 98560929 98561232 -101068918 - AluSp SINE Alu -9 304 1 657 197 8 8 chr5 98561236 98561363 -101068787 - FLAM_A SINE Alu -6 127 1 763 167 5 176 chr5 98561363 98561419 -101068731 + MER5A DNA MER1_type 124 188 -1 2034 218 60 17 chr5 98561502 98561970 -101068180 - MLT1D LTR MaLR -17 488 1 22 0 0 0 chr5 98562534 98562556 -101067594 + AT_rich Low_complexity Low_complexity 1 22 0 450 224 121 146 chr5 98562570 98563016 -101067134 + LTR8A LTR ERV1 1 435 -292 201 334 36 94 chr5 98563669 98563977 -101066173 - L2 LINE L2 -38 3234 2945 2147 111 3 0 chr5 98565953 98566251 -101063899 - AluSq SINE Alu -14 299 1 815 213 44 0 chr5 98567115 98567275 -101062875 - MER45A DNA AcHobo -11 167 1 482 260 34 83 chr5 98568117 98568253 -101061897 - HAL1 LINE L1 -290 2217 2093 2361 91 0 7 chr5 98568253 98568561 -101061589 - AluSc SINE Alu -3 306 1 482 260 34 83 chr5 98568561 98568628 -101061522 - HAL1 LINE L1 -414 2093 2024 373 43 0 0 chr5 98568639 98568685 -101061465 + (TTTTC)n Simple_repeat Simple_repeat 5 150 0 1239 71 0 0 chr5 98568685 98568840 -101061310 - AluY SINE Alu -30 281 127 251 265 59 0 chr5 98568996 98569064 -101061086 - HAL1 LINE L1 -731 1776 1705 1099 89 6 0 chr5 98569066 98569224 -101060926 + MER41B LTR ERV1 1 159 -476 1356 124 0 69 chr5 98569226 98569444 -101060706 + AluSx SINE Alu 1 203 -109 341 219 80 22 chr5 98570057 98570194 -101059956 - Charlie8 DNA MER1_type -2158 259 115 694 147 0 17 chr5 98571063 98571179 -101058971 - FLAM_A SINE Alu -6 136 23 204 200 0 0 chr5 98571343 98571388 -101058762 + CT-rich Low_complexity Low_complexity 6 50 0 2088 154 28 39 chr5 98573037 98573499 -101056651 - L1MB4 LINE L1 -4 6176 5720 2452 60 0 10 chr5 98575468 98575767 -101054383 - AluY SINE Alu -15 296 1 371 278 110 35 chr5 98575902 98576129 -101054021 + L3 LINE CR1 545 788 -789 269 340 32 0 chr5 98576133 98576227 -101053923 + L3 LINE CR1 893 989 -588 33 56 0 0 chr5 98577029 98577083 -101053067 + AT_rich Low_complexity Low_complexity 1 54 0 936 129 8 0 chr5 98577457 98577633 -101052517 - FLAM_C SINE Alu 0 177 1 2109 113 3 10 chr5 98577656 98578008 -101052142 + AluSc SINE Alu 1 350 0 271 281 167 9 chr5 98578024 98578138 -101052012 - L3b LINE CR1 -101 1482 1351 1217 113 5 54 chr5 98578194 98578242 -101051908 - L1MB3 LINE L1 -3 6180 6131 2443 78 0 7 chr5 98578242 98578550 -101051600 - AluY SINE Alu -5 306 1 1217 113 5 54 chr5 98578550 98578722 -101051428 - L1MB3 LINE L1 -52 6131 5971 2056 126 11 0 chr5 98579220 98579506 -101050644 - AluSx SINE Alu -23 289 1 246 418 16 0 chr5 98581691 98581813 -101048337 - L2 LINE L2 -9 3263 3140 1794 187 3 11 chr5 98582594 98582941 -101047209 - MER2 DNA MER2_type 0 344 1 1911 158 3 10 chr5 98582944 98583242 -101046908 - AluSx SINE Alu -16 296 1 282 365 50 6 chr5 98584242 98584401 -101045749 - MIR SINE MIR -51 211 46 35 41 0 0 chr5 98584592 98584641 -101045509 + AT_rich Low_complexity Low_complexity 1 49 0 1984 161 3 0 chr5 98584641 98584952 -101045198 - AluSx SINE Alu 0 312 1 26 0 0 0 chr5 98585231 98585257 -101044893 + AT_rich Low_complexity Low_complexity 1 26 0 509 110 0 12 chr5 98585509 98585591 -101044559 - MER46A DNA MER2_type 0 236 156 294 95 0 0 chr5 98585642 98585684 -101044466 + (TA)n Simple_repeat Simple_repeat 1 42 0 802 218 0 0 chr5 98585720 98585867 -101044283 - MER46A DNA MER2_type -88 148 2 538 249 159 63 chr5 98586296 98586895 -101043255 + L1ME4a LINE L1 5457 6112 -9 281 288 45 27 chr5 98587476 98587587 -101042563 - MIR SINE MIR -56 152 40 21 71 0 0 chr5 98590123 98590165 -101039985 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr5 98592615 98592639 -101037511 + AT_rich Low_complexity Low_complexity 1 24 0 27 29 0 0 chr5 98592707 98592741 -101037409 + AT_rich Low_complexity Low_complexity 1 34 0 1965 148 27 0 chr5 98593447 98593744 -101036406 + AluSx SINE Alu 1 305 -7 1840 150 29 0 chr5 98593860 98594140 -101036010 - AluSx SINE Alu -24 288 1 204 182 0 0 chr5 98594436 98594480 -101035670 + T-rich Low_complexity Low_complexity 1 44 0 1916 62 0 66 chr5 98595117 98595437 -101034713 + AluY SINE Alu 1 299 -12 370 329 175 0 chr5 98595440 98595583 -101034567 - MIR3 SINE MIR -11 197 30 1674 179 11 4 chr5 98596989 98597268 -101032882 + AluJb SINE Alu 1 281 -31 252 0 0 0 chr5 98597268 98597296 -101032854 + (CA)n Simple_repeat Simple_repeat 1 28 0 251 295 47 39 chr5 98598299 98598428 -101031722 + L2 LINE L2 2599 2728 -586 365 189 95 0 chr5 98598513 98598587 -101031563 + MIR SINE MIR 38 118 -90 401 188 52 10 chr5 98598934 98599030 -101031120 + MER63A DNA MER1_type 111 210 0 540 229 33 60 chr5 98599330 98599513 -101030637 + MER5B DNA MER1_type 1 178 0 1822 105 0 0 chr5 98599539 98599777 -101030373 + AluSg/x SINE Alu 73 310 0 697 163 8 4 chr5 98600233 98600376 -101029774 - L1MB1 LINE L1 -8 6160 6036 368 260 197 8 chr5 98602276 98602403 -101027747 + MER5A DNA MER1_type 39 189 0 4399 149 13 8 chr5 98604328 98605124 -101025026 + L1MB3 LINE L1 5380 6179 -4 27 29 0 0 chr5 98605782 98605816 -101024334 + AT_rich Low_complexity Low_complexity 1 34 0 290 247 0 12 chr5 98605816 98605897 -101024253 + MER116 DNA Mariner 1 80 0 1791 122 69 0 chr5 98606984 98607275 -101022875 - AluSx SINE Alu 0 311 3 22 35 0 0 chr5 98607654 98607683 -101022467 + AT_rich Low_complexity Low_complexity 1 29 0 583 255 71 64 chr5 98607702 98607838 -101022312 - L1MC4 LINE L1 -11 8031 7897 369 102 0 0 chr5 98607838 98607897 -101022253 + (CA)n Simple_repeat Simple_repeat 2 60 0 583 255 71 64 chr5 98607897 98607948 -101022202 - L1MC4 LINE L1 -145 7897 7848 2365 60 0 20 chr5 98607948 98608249 -101021901 - AluY SINE Alu -14 297 3 583 255 71 64 chr5 98608249 98608495 -101021655 - L1MC4 LINE L1 -194 7848 7594 386 260 39 19 chr5 98608533 98608637 -101021513 + MER5A DNA MER1_type 1 106 -83 254 297 66 0 chr5 98608567 98608658 -101021492 - MER5A DNA MER1_type -22 167 71 * 191 179 26 26 chr5 98608640 98608679 -101021471 + MER5A DNA MER1_type 151 189 0 * 2907 117 61 13 chr5 98609078 98609555 -101020595 + L1PA15 LINE L1 5653 6152 -13 757 200 0 15 chr5 98609619 98609754 -101020396 - FLAM_A SINE Alu 0 133 1 2093 245 50 38 chr5 98609989 98610509 -101019641 - MER115 DNA AcHobo 0 693 162 1061 191 10 14 chr5 98610509 98610718 -101019432 + MER3 DNA MER1_type 2 209 0 2093 245 50 38 chr5 98610718 98610882 -101019268 - MER115 DNA AcHobo -531 162 1 225 300 14 0 chr5 98611168 98611238 -101018912 + GA-rich Low_complexity Low_complexity 2 72 0 23 0 0 0 chr5 98612436 98612459 -101017691 + AT_rich Low_complexity Low_complexity 1 23 0 950 270 32 45 chr5 98613661 98614102 -101016048 - LTR16A LTR ERVL 0 450 16 384 283 28 0 chr5 98614283 98614389 -101015761 - MIR3 SINE MIR -34 174 66 614 221 18 0 chr5 98615868 98615981 -101014169 + FLAM_A SINE Alu 1 115 -18 1945 152 0 7 chr5 98616002 98616312 -101013838 - AluJb SINE Alu -4 308 1 353 320 133 86 chr5 98616568 98616905 -101013245 - L2 LINE L2 -1 3271 2919 612 207 17 6 chr5 98617029 98617096 -101013054 + GA-rich Low_complexity Low_complexity 3 68 -110 1989 152 7 3 chr5 98617096 98617392 -101012758 + AluSx SINE Alu 1 297 -15 612 207 17 6 chr5 98617392 98617498 -101012652 + GA-rich Low_complexity Low_complexity 68 178 0 2422 81 3 0 chr5 98618005 98618315 -101011835 - AluY SINE Alu 0 311 1 367 279 11 70 chr5 98618338 98618625 -101011525 + HAL1 LINE L1 1001 1270 -1237 1224 247 102 5 chr5 98618876 98619317 -101010833 + L1MC4 LINE L1 6699 7182 -860 770 281 44 85 chr5 98619580 98620085 -101010065 + L1MC4 LINE L1 6699 7182 -860 747 202 16 0 chr5 98620218 98620347 -101009803 + FLAM_A SINE Alu 3 133 0 597 214 9 129 chr5 98620369 98620520 -101009630 + L1MC4 LINE L1 7613 7702 -340 2380 97 0 0 chr5 98620520 98620829 -101009321 - AluY SINE Alu -2 309 1 597 214 9 129 chr5 98620829 98621018 -101009132 + L1MC4 LINE L1 7702 7912 -130 180 293 0 0 chr5 98621128 98621169 -101008981 - L2 LINE L2 -587 2727 2687 1088 225 161 10 chr5 98621211 98621509 -101008641 + MER69 DNA AcHobo 1 343 -2183 284 348 110 37 chr5 98621836 98622178 -101007972 - L2 LINE L2 -1046 2268 1874 2010 157 67 13 chr5 98622178 98622554 -101007596 - MSTD LTR MaLR 0 396 1 284 348 110 37 chr5 98622554 98622728 -101007422 - L2 LINE L2 -1440 1874 1714 1417 208 15 15 chr5 98622749 98623139 -101007011 + L1ME3 LINE L1 5586 6066 -96 686 300 131 24 chr5 98623346 98623843 -101006307 + L2 LINE L2 1765 2314 -1000 337 267 84 59 chr5 98623910 98624112 -101006038 + L1 LINE L1 4110 4316 -1830 2252 110 121 23 chr5 98624360 98624750 -101005400 - MSTA LTR MaLR 0 428 1 256 250 49 42 chr5 98625026 98625170 -101004980 + L1 LINE L1 4378 4522 -1624 1935 213 41 55 chr5 98625170 98625737 -101004413 - MLT1G LTR MaLR 0 590 32 1719 125 8 4 chr5 98625956 98626212 -101003938 + HERVS71 LTR ERV1 1893 2149 -6829 24 0 0 0 chr5 98626512 98626536 -101003614 + AT_rich Low_complexity Low_complexity 1 24 0 457 277 102 11 chr5 98626544 98626721 -101003429 - L1MEd LINE L1 -5469 650 458 255 257 0 79 chr5 98626924 98627025 -101003125 - L1MEd LINE L1 -5924 195 103 238 29 44 7 chr5 98627064 98627109 -101003041 - L1PA4 LINE L1 0 6155 6113 508 344 96 52 chr5 98627262 98627283 -101002867 - L2 LINE L2 -1 3271 3252 2416 74 7 0 chr5 98627283 98627579 -101002571 + AluSq SINE Alu 1 298 -15 508 344 96 52 chr5 98627579 98627941 -101002209 - L2 LINE L2 -20 3252 2871 647 328 170 28 chr5 98627972 98628892 -101001258 - L2 LINE L2 -1638 1676 627 8123 86 0 1 chr5 98629092 98630183 -100999967 - HERVS71 LTR ERV1 -1819 7159 6070 3353 111 6 0 chr5 98630182 98631020 -100999130 - HERVS71 LTR ERV1 -3305 5673 4803 * 8543 94 11 2 chr5 98631002 98632220 -100997930 - HERVS71 LTR ERV1 -5742 3236 2008 255 219 21 42 chr5 98632334 98632430 -100997720 + L1ME3 LINE L1 6068 6161 -1 22 0 0 0 chr5 98632447 98632469 -100997681 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 98633346 98633368 -100996782 + AT_rich Low_complexity Low_complexity 1 22 0 1527 179 4 8 chr5 98634062 98634330 -100995820 - AluSx SINE Alu -45 267 1 616 304 73 24 chr5 98636042 98636289 -100993861 - MIR SINE MIR -1 261 3 21 36 0 0 chr5 98637404 98637432 -100992718 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 98639034 98639057 -100991093 + GC_rich Low_complexity Low_complexity 1 23 0 1528 186 38 9 chr5 98640275 98640620 -100989530 + L1MB2 LINE L1 5755 6109 -62 4120 111 21 2 chr5 98640904 98641527 -100988623 - MER41B LTR ERV1 0 635 1 215 265 38 143 chr5 98641702 98641940 -100988210 - L2 LINE L2 -218 3054 2842 336 282 77 0 chr5 98642004 98642121 -100988029 + MLT1J1 LTR MaLR 6 131 -315 353 278 99 14 chr5 98642150 98642375 -100987775 + MLT1J2 LTR MaLR 193 436 -14 2211 251 103 67 chr5 98643144 98644536 -100985614 + Charlie7 DNA MER1_type 35 1477 -1135 25 0 0 0 chr5 98644605 98644630 -100985520 + AT_rich Low_complexity Low_complexity 1 25 0 721 241 43 23 chr5 98644836 98645093 -100985057 - L1ME3A LINE L1 -219 5951 5690 609 190 121 0 chr5 98645164 98645280 -100984870 - FLAM_A SINE Alu -3 130 1 732 208 14 0 chr5 98645308 98645452 -100984698 - MIR SINE MIR -25 237 92 964 83 0 0 chr5 98645476 98645596 -100984554 + AluSq SINE Alu 56 175 -138 283 266 16 0 chr5 98645599 98645663 -100984487 - MIR SINE MIR -183 79 15 1152 230 187 27 chr5 98645664 98646337 -100983813 + Charlie7 DNA MER1_type 1832 2612 0 188 35 35 0 chr5 98646621 98646650 -100983500 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1383 102 0 23 chr5 98646876 98647091 -100983059 - MER30 DNA MER1_type -1 229 20 2102 92 21 0 chr5 98647407 98647691 -100982459 + AluSg SINE Alu 1 290 -20 629 314 143 55 chr5 98650878 98651962 -100978188 + L2 LINE L2 498 1676 -1638 399 271 160 27 chr5 98652226 98652435 -100977715 - L1ME3A LINE L1 0 6170 5934 498 257 56 14 chr5 98652440 98652584 -100977566 + LTR33 LTR ERVL 13 162 -359 191 111 0 28 chr5 98652681 98652717 -100977433 + (TG)n Simple_repeat Simple_repeat 2 36 0 281 292 34 0 chr5 98652717 98652806 -100977344 + (CATATA)n Simple_repeat Simple_repeat 4 95 0 1574 174 25 16 chr5 98652807 98653116 -100977034 - MLT2D LTR ERVL -41 479 74 2309 108 90 0 chr5 98653144 98653478 -100976672 - THE1B LTR MaLR 0 364 1 4379 88 2 3 chr5 98653478 98654089 -100976061 - THE1B-int LTR MaLR 0 1580 971 1041 279 149 21 chr5 98654109 98654852 -100975298 - L1ME3A LINE L1 -647 5517 4620 2295 98 0 0 chr5 98654852 98655148 -100975002 - AluSc SINE Alu -13 296 1 1041 279 149 21 chr5 98655148 98655330 -100974820 - L1ME3A LINE L1 -1544 4620 4463 663 313 140 25 chr5 98655393 98656001 -100974149 + L2 LINE L2 1637 2314 -1000 337 267 84 59 chr5 98656068 98656270 -100973880 + L1 LINE L1 4110 4316 -1830 2261 108 121 23 chr5 98656518 98656906 -100973244 - MSTA LTR MaLR 0 428 3 1012 176 64 147 chr5 98657731 98657849 -100972301 + MLT1A2 LTR MaLR 1 127 -247 1819 148 3 72 chr5 98657849 98658167 -100971983 + AluJb SINE Alu 1 296 -16 1012 176 64 147 chr5 98658167 98658456 -100971694 + MLT1A2 LTR MaLR 127 374 0 189 0 0 0 chr5 98658459 98658480 -100971670 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 246 105 0 0 chr5 98659026 98659064 -100971086 + (TG)n Simple_repeat Simple_repeat 1 38 0 2037 148 0 3 chr5 98659460 98659765 -100970385 - AluSx SINE Alu -8 304 1 197 311 148 0 chr5 98659817 98659878 -100970272 + L2 LINE L2 3198 3267 -5 1712 193 0 16 chr5 98660212 98660523 -100969627 - AluJo SINE Alu -6 306 1 236 340 122 13 chr5 98660566 98660722 -100969428 + MIR SINE MIR 3 175 -87 29 60 0 0 chr5 98661638 98661688 -100968462 + AT_rich Low_complexity Low_complexity 1 50 0 281 222 125 0 chr5 98661954 98662026 -100968124 - MIR3 SINE MIR 0 208 128 763 199 19 0 chr5 98662226 98662387 -100967763 + L1MD2 LINE L1 6095 6258 -101 879 120 8 0 chr5 98662387 98662512 -100967638 + AluSq/x SINE Alu 1 126 -187 2171 122 0 0 chr5 98662516 98662810 -100967340 + AluSg SINE Alu 1 294 -16 23 0 0 0 chr5 98662873 98662896 -100967254 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 98662957 98662978 -100967172 + AT_rich Low_complexity Low_complexity 1 21 0 203 374 32 0 chr5 98663092 98663215 -100966935 + L2 LINE L2 2199 2325 -989 * 292 246 0 0 chr5 98663190 98663255 -100966895 + L2 LINE L2 3249 3313 0 761 261 59 10 chr5 98663724 98663927 -100966223 - MIR SINE MIR -16 246 34 21 36 0 0 chr5 98664244 98664272 -100965878 + AT_rich Low_complexity Low_complexity 1 28 0 1535 176 64 87 chr5 98665012 98665461 -100964689 + Charlie1 DNA MER1_type 1556 1994 -767 278 264 0 11 chr5 98665461 98665548 -100964602 + MLT1F1 LTR MaLR 1 86 -481 1161 195 72 58 chr5 98665736 98666084 -100964066 + MLT1F1 LTR MaLR 213 565 -2 734 168 68 6 chr5 98666084 98666233 -100963917 + Charlie1 DNA MER1_type 2116 2274 -487 1216 189 104 29 chr5 98666234 98666514 -100963636 - AluJo SINE Alu -6 306 6 1382 201 22 6 chr5 98666519 98666823 -100963327 + Charlie1 DNA MER1_type 2272 2580 -181 2011 209 75 28 chr5 98666823 98667364 -100962786 - MLT1F1 LTR MaLR 0 567 1 655 177 0 55 chr5 98667364 98667487 -100962663 + Charlie1 DNA MER1_type 2608 2722 -39 2034 121 7 0 chr5 98667487 98667790 -100962360 - AluSx SINE Alu 0 305 1 655 177 0 55 chr5 98667790 98667828 -100962322 + Charlie1 DNA MER1_type 2722 2761 0 469 228 42 39 chr5 98668189 98668390 -100961760 - MER34 LTR ERV1 -321 244 1 1703 170 3 3 chr5 98668938 98669226 -100960924 - AluJo SINE Alu -22 290 3 24 32 0 0 chr5 98669353 98669384 -100960766 + AT_rich Low_complexity Low_complexity 1 31 0 886 293 77 20 chr5 98669562 98670016 -100960134 - L1ME3A LINE L1 -202 5968 5489 498 324 88 40 chr5 98670022 98670476 -100959674 + L1M4 LINE L1 2475 2950 -3196 430 312 84 35 chr5 98670970 98671518 -100958632 + L1M4 LINE L1 3687 4261 -1885 446 276 9 77 chr5 98671589 98671810 -100958340 + L1M4 LINE L1 4735 4940 -1206 1701 50 0 0 chr5 98671875 98672075 -100958075 - AluY SINE Alu -13 298 99 238 294 0 0 chr5 98672323 98672391 -100957759 - L1MC5 LINE L1 -573 7388 7321 473 297 28 0 chr5 98672400 98672545 -100957605 - L1MC4 LINE L1 -568 7474 7326 * 948 283 74 8 chr5 98672544 98672897 -100957253 - L1MC4a LINE L1 -898 6910 6535 2266 146 58 5 chr5 98672912 98673358 -100956792 - L1PA13 LINE L1 0 6163 5694 3952 140 12 22 chr5 98674233 98674560 -100955590 - L1PB4 LINE L1 -5 6151 5822 1378 191 27 38 chr5 98674560 98674853 -100955297 + AluJo SINE Alu 1 290 -22 3952 140 12 22 chr5 98674853 98675191 -100954959 - L1PB4 LINE L1 -334 5822 5493 453 262 48 0 chr5 98675192 98675318 -100954832 - L2 LINE L2 -15 3298 3167 2135 113 10 13 chr5 98676972 98677281 -100952869 + AluSx SINE Alu 3 310 -2 220 311 0 39 chr5 98677360 98677463 -100952687 + MIR SINE MIR 158 256 -6 381 271 70 32 chr5 98677932 98678099 -100952051 - MIR SINE MIR -33 175 1 2326 74 0 0 chr5 98679271 98679575 -100950575 + AluY SINE Alu 1 304 0 399 321 140 55 chr5 98681436 98682400 -100947750 - L2 LINE L2 -11 3261 2217 2390 59 0 3 chr5 98682910 98683213 -100946937 + AluY SINE Alu 1 302 -9 2161 130 0 0 chr5 98684705 98685013 -100945137 - AluSx SINE Alu -4 308 1 603 300 98 52 chr5 98685766 98686133 -100944017 - L2 LINE L2 -2 3311 2928 1085 267 55 50 chr5 98686163 98686564 -100943586 - L2 LINE L2 -449 2865 2463 831 106 0 0 chr5 98686726 98686849 -100943301 + L1PB1 LINE L1 6029 6151 0 2089 133 10 0 chr5 98686988 98687288 -100942862 + AluSq SINE Alu 3 305 -8 1128 298 80 48 chr5 98688295 98688859 -100941291 - MLT1K LTR MaLR -3 585 4 2132 110 17 0 chr5 98689076 98689375 -100940775 + AluSx SINE Alu 9 312 0 667 207 45 129 chr5 98689627 98689936 -100940214 - LTR40b LTR ERVL -5 457 175 213 94 0 0 chr5 98689986 98690018 -100940132 + (GA)n Simple_repeat Simple_repeat 1 32 0 394 192 242 17 chr5 98690118 98690238 -100939912 - LTR40a LTR ERVL -372 147 1 671 299 173 33 chr5 98690658 98691139 -100939011 - L1MEd LINE L1 -5469 650 103 248 29 44 7 chr5 98691179 98691224 -100938926 - L1PA4 LINE L1 0 6155 6113 500 338 105 53 chr5 98691377 98691398 -100938752 - L2 LINE L2 -1 3271 3253 2396 74 7 0 chr5 98691398 98691694 -100938456 + AluSq SINE Alu 1 298 -15 500 338 105 53 chr5 98691694 98692071 -100938079 - L2 LINE L2 -19 3253 2852 2483 121 52 5 chr5 98694964 98695369 -100934781 - MSTA LTR MaLR -1 427 4 363 291 10 0 chr5 98696039 98696142 -100934008 + MIR SINE MIR 155 258 -4 626 204 204 27 chr5 98696255 98696475 -100933675 - L1ME3A LINE L1 0 6170 5912 415 315 72 49 chr5 98696577 98696807 -100933343 - MIR SINE MIR -27 235 2 765 286 48 20 chr5 98696836 98697084 -100933066 + MIR SINE MIR 2 256 -6 2178 109 20 0 chr5 98697119 98697413 -100932737 - AluSq SINE Alu -13 300 1 3174 146 17 31 chr5 98697434 98698038 -100932112 + L1MA6 LINE L1 5703 6297 -3 21 36 0 0 chr5 98699550 98699578 -100930572 + AT_rich Low_complexity Low_complexity 1 28 0 2266 229 100 46 chr5 98699632 98700542 -100929608 - L1ME3A LINE L1 -53 6117 5115 682 149 7 92 chr5 98700542 98700683 -100929467 + FLAM_A SINE Alu 1 129 -4 2266 229 100 46 chr5 98700683 98701076 -100929074 - L1ME3A LINE L1 -1055 5115 4744 222 118 0 0 chr5 98701250 98701284 -100928866 + (TG)n Simple_repeat Simple_repeat 2 35 0 245 222 12 25 chr5 98701284 98701365 -100928785 + L1ME3 LINE L1 4625 4704 -1442 513 335 162 27 chr5 98701671 98702400 -100927750 - L2 LINE L2 -1019 2295 1469 261 271 75 23 chr5 98702573 98702706 -100927444 - MLT1L LTR MaLR -24 591 452 * 2300 156 3 0 chr5 98702703 98703061 -100927089 + MLT1A1 LTR MaLR 7 365 0 21 36 0 0 chr5 98704857 98704885 -100925265 + AT_rich Low_complexity Low_complexity 1 28 0 366 193 83 55 chr5 98706268 98706413 -100923737 + L1MC5 LINE L1 7774 7922 -39 39 0 0 0 chr5 98706442 98706481 -100923669 + AT_rich Low_complexity Low_complexity 1 39 0 393 262 99 23 chr5 98707534 98707706 -100922444 - MER5A DNA MER1_type -1 188 4 36 82 0 0 chr5 98708156 98708241 -100921909 + AT_rich Low_complexity Low_complexity 1 85 0 646 290 41 31 chr5 98708320 98708610 -100921540 - L1MC4a LINE L1 -1923 5885 5593 24 32 0 0 chr5 98708671 98708702 -100921448 + AT_rich Low_complexity Low_complexity 1 31 0 2198 98 3 0 chr5 98709204 98709489 -100920661 - AluSx SINE Alu -26 286 1 747 273 125 129 chr5 98709912 98710857 -100919293 - L2 LINE L2 -279 3034 2093 1604 164 18 21 chr5 98711413 98711699 -100918451 + AluJo SINE Alu 4 288 -24 2521 68 0 0 chr5 98711982 98712289 -100917861 - AluY SINE Alu -4 307 1 1156 241 167 12 chr5 98713216 98713863 -100916287 + L1ME3 LINE L1 5188 5951 -211 198 0 0 0 chr5 98714191 98714213 -100915937 + (A)n Simple_repeat Simple_repeat 1 22 0 187 296 68 11 chr5 98715219 98715307 -100914843 - MIR SINE MIR -26 236 144 544 235 179 17 chr5 98715595 98715774 -100914376 + MIR SINE MIR 36 243 -19 2422 61 3 3 chr5 98716679 98716976 -100913174 + AluSp SINE Alu 1 297 -16 602 218 21 85 chr5 98717440 98717628 -100912522 + MER5B DNA MER1_type 1 176 -2 304 157 0 0 chr5 98718959 98719010 -100911140 + L2 LINE L2 2201 2251 -1063 484 242 38 66 chr5 98719100 98719409 -100910741 + MLT1J2 LTR MaLR 105 421 -29 417 315 22 34 chr5 98719433 98719611 -100910539 + L2 LINE L2 2315 2490 -824 623 158 0 0 chr5 98719623 98719718 -100910432 + MER68 LTR ERV1 1 95 -467 1538 162 44 3 chr5 98719737 98720149 -100910001 - LTR32 LTR ERVL 0 471 12 1108 236 128 35 chr5 98720169 98720575 -100909575 + MER68 LTR ERV1 117 560 -2 388 299 51 0 chr5 98720578 98720695 -100909455 + L2 LINE L2 2487 2609 -705 509 200 9 55 chr5 98721473 98721583 -100908567 + MER69B DNA AcHobo 17 121 -1105 21 0 0 0 chr5 98721605 98721626 -100908524 + AT_rich Low_complexity Low_complexity 1 21 0 936 215 17 9 chr5 98721679 98722020 -100908130 - L1MC4 LINE L1 -154 7888 7477 1881 218 233 11 chr5 98722281 98723132 -100907018 + MER69B DNA AcHobo 105 1181 -45 265 143 0 0 chr5 98724511 98724553 -100905597 - MER103 DNA DNA -79 87 46 708 260 94 83 chr5 98724578 98725097 -100905053 + L1MC4 LINE L1 7493 8017 -25 2326 104 3 0 chr5 98725524 98725832 -100904318 - AluSx SINE Alu -3 309 1 23 33 0 0 chr5 98725964 98725994 -100904156 + AT_rich Low_complexity Low_complexity 1 30 0 1108 279 44 9 chr5 98726255 98726570 -100903580 + MLT1K LTR MaLR 261 586 -2 872 229 0 0 chr5 98726626 98726783 -100903367 + AluJo SINE Alu 1 157 -155 805 147 9 0 chr5 98726794 98726910 -100903240 + FLAM_C SINE Alu 2 118 -15 2499 237 48 0 chr5 98727812 98728352 -100901798 + MLT1G LTR MaLR 25 590 0 314 188 62 12 chr5 98728355 98728435 -100901715 - MLT1L LTR MaLR -531 84 1 231 114 0 0 chr5 98728506 98728541 -100901609 + (A)n Simple_repeat Simple_repeat 1 35 0 1589 188 35 7 chr5 98728786 98729074 -100901076 + AluJb SINE Alu 1 296 -16 368 241 83 35 chr5 98729085 98729230 -100900920 - MLT1J LTR MaLR -30 481 330 3698 143 72 42 chr5 98729239 98729452 -100900698 - MER50 LTR ERV1 -23 711 506 7503 43 0 0 chr5 98729452 98730297 -100899853 + L1PA5 LINE L1 5310 6154 0 3698 143 72 42 chr5 98730297 98730773 -100899377 - MER50 LTR ERV1 -228 506 1 435 241 51 65 chr5 98730858 98731035 -100899115 - MLT1J2 LTR MaLR -248 198 18 449 306 12 18 chr5 98731307 98731477 -100898673 + MIR SINE MIR 92 260 -2 2399 156 63 0 chr5 98731483 98731861 -100898289 - MER93a LTR ERV1 0 402 1 192 211 132 0 chr5 98732089 98732127 -100898023 - MIR SINE MIR -145 63 21 415 227 223 27 chr5 98732177 98732397 -100897753 - MLT1H LTR MaLR -4 545 283 2709 120 50 26 chr5 98732608 98732984 -100897166 + MSTA LTR MaLR 1 389 -39 2326 94 7 0 chr5 98732984 98733282 -100896868 - AluSp SINE Alu -13 300 1 2709 120 50 26 chr5 98733282 98733323 -100896827 + MSTA LTR MaLR 389 428 0 10403 154 32 3 chr5 98733323 98734928 -100895222 + MSTA-int LTR MaLR 1 1651 0 2653 129 25 39 chr5 98734928 98735362 -100894788 + MSTA LTR MaLR 1 428 0 848 215 0 0 chr5 98735644 98735802 -100894348 + FRAM SINE Alu 1 158 -18 785 296 77 57 chr5 98736080 98736678 -100893472 - MLT1L LTR MaLR -4 611 2 383 353 36 12 chr5 98736909 98737076 -100893074 - MIR SINE MIR -90 172 2 1471 217 92 36 chr5 98738313 98738612 -100891538 + MLT1L LTR MaLR 148 478 -137 3368 136 9 38 chr5 98738612 98739142 -100891008 - MLT2B2 LTR ERVL 0 515 1 1471 217 92 36 chr5 98739142 98739256 -100890894 + MLT1L LTR MaLR 478 584 -31 490 305 103 90 chr5 98739616 98739993 -100890157 + L2 LINE L2 2891 3272 0 410 205 13 0 chr5 98740235 98740313 -100889837 - L2 LINE L2 -9 3304 3226 308 274 100 97 chr5 98741717 98742016 -100888134 + L1M2 LINE L1 1092 1391 -5458 27 29 0 0 chr5 98742190 98742224 -100887926 + GC_rich Low_complexity Low_complexity 1 34 0 204 40 0 0 chr5 98742240 98742265 -100887885 + (CGG)n Simple_repeat Simple_repeat 2 26 0 317 277 128 88 chr5 98742283 98742626 -100887524 + L1M2 LINE L1 560 916 -5933 196 175 25 25 chr5 98744555 98744595 -100885555 + L2 LINE L2 3014 3053 -219 2062 155 3 0 chr5 98744771 98745081 -100885069 - AluJo SINE Alu -1 311 1 1531 261 123 37 chr5 98745088 98745842 -100884308 - HAL1 LINE L1 -4 2503 1685 1540 231 84 25 chr5 98745922 98746411 -100883739 - HAL1 LINE L1 -637 1870 1353 598 305 74 15 chr5 98746412 98746681 -100883469 - L1MC4 LINE L1 -379 7663 7379 717 282 105 18 chr5 98746881 98747304 -100882846 - L1ME4a LINE L1 -204 5917 5446 3029 168 51 36 chr5 98747330 98747974 -100882176 - L1MB7 LINE L1 -19 6165 5512 2449 251 91 65 chr5 98747967 98748262 -100881888 - L1MCc LINE L1 -4536 2499 2213 * 1483 121 178 11 chr5 98748262 98748526 -100881624 - AluSg1 SINE Alu -1 308 1 2449 251 91 65 chr5 98748526 98748584 -100881566 - L1MCc LINE L1 -4822 2213 2158 1667 144 0 0 chr5 98748584 98748820 -100881330 - AluSx SINE Alu -76 236 1 2449 251 91 65 chr5 98748820 98750117 -100880033 - L1MCc LINE L1 -4877 2158 658 1462 251 79 39 chr5 98750131 98750701 -100879449 - L1MCc LINE L1 -5814 609 17 1635 190 7 3 chr5 98751031 98751320 -100878830 + AluJo SINE Alu 1 290 -22 433 303 69 49 chr5 98751561 98751911 -100878239 - L1ME4a LINE L1 -1383 4763 4407 1197 154 0 30 chr5 98751911 98752112 -100878038 + AluJb SINE Alu 85 279 -33 255 61 0 0 chr5 98752117 98752150 -100878000 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 1887 117 30 4 chr5 98752236 98752501 -100877649 - AluSq SINE Alu -41 272 1 529 170 252 54 chr5 98752712 98752756 -100877394 + MER5B DNA MER1_type 2 36 -142 2179 80 18 0 chr5 98752756 98753032 -100877118 - AluSx SINE Alu -11 301 21 529 170 252 54 chr5 98753032 98753134 -100877016 + MER5B DNA MER1_type 36 177 -1 1126 155 57 21 chr5 98753149 98753343 -100876807 + MER58A DNA MER1_type 10 210 -14 5290 124 30 4 chr5 98753344 98754174 -100875976 + L1MA5 LINE L1 5427 6278 -22 1856 101 3 110 chr5 98754174 98754523 -100875627 - AluSp SINE Alu 0 315 1 2291 110 0 0 chr5 98754664 98754963 -100875187 + AluSx SINE Alu 1 299 -13 1282 256 100 43 chr5 98755055 98755751 -100874399 - L2 LINE L2 -4 3309 2550 207 211 0 0 chr5 98756207 98756245 -100873905 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 198 273 21 119 chr5 98756610 98756753 -100873397 - MER5B DNA MER1_type -8 170 42 346 250 110 106 chr5 98756782 98757092 -100873058 + L1MC4a LINE L1 4444 4751 -1370 1766 199 0 0 chr5 98757092 98757403 -100872747 + AluJb SINE Alu 1 311 -1 346 250 110 106 chr5 98757403 98757708 -100872442 + L1MC4a LINE L1 4751 5053 -1068 2009 75 94 0 chr5 98757708 98757975 -100872175 + AluY SINE Alu 1 292 -19 346 250 110 106 chr5 98757975 98758056 -100872094 + L1MC4a LINE L1 5053 5132 -989 320 65 0 0 chr5 98758056 98758102 -100872048 - L1MA7 LINE L1 -3 6288 6243 346 250 110 106 chr5 98758102 98758656 -100871494 + L1MC4a LINE L1 5132 5662 -459 247 200 85 108 chr5 98758691 98758821 -100871329 + HAL1 LINE L1 2381 2507 0 2196 115 3 0 chr5 98759182 98759478 -100870672 - AluSc SINE Alu -12 297 1 1530 175 191 28 chr5 98760774 98761197 -100868953 - LTR54B LTR ERV1 -6 492 1 533 272 110 6 chr5 98761513 98761686 -100868464 + MIR SINE MIR 19 209 -53 595 278 51 43 chr5 98762382 98762616 -100867534 + MIR SINE MIR 26 261 -1 244 318 71 0 chr5 98762709 98762863 -100867287 + MER103 DNA DNA 2 166 0 1377 254 95 15 chr5 98763955 98764588 -100865562 - L2 LINE L2 -42 3271 2585 602 240 22 68 chr5 98765123 98765201 -100864949 - MIR SINE MIR -4 258 178 2387 89 0 0 chr5 98765201 98765494 -100864656 - AluSx SINE Alu -19 293 1 602 240 22 68 chr5 98765494 98765639 -100864511 - MIR SINE MIR -84 178 5 273 241 126 11 chr5 98767055 98767142 -100863008 - MER94 DNA DNA -33 101 5 4719 98 33 16 chr5 98767263 98767997 -100862153 - L1PA16 LINE L1 -3 6163 5418 476 302 101 17 chr5 98768010 98768240 -100861910 - L1ME LINE L1 -350 5771 5562 2419 85 3 0 chr5 98768240 98768545 -100861605 - AluY SINE Alu -4 307 2 476 302 101 17 chr5 98768545 98768782 -100861368 - L1ME LINE L1 -559 5562 5265 2047 125 0 3 chr5 98770259 98770556 -100859594 + AluSc SINE Alu 1 296 -13 283 143 0 18 chr5 98770710 98770766 -100859384 + HsTC2 DNA Tc2 5 59 -1839 314 361 4 39 chr5 98772721 98772981 -100857169 + L2 LINE L2 2818 3068 -204 5323 65 21 11 chr5 98773126 98773832 -100856318 + L1PA10 LINE L1 5454 6166 -2 654 293 128 0 chr5 98773833 98774099 -100856051 - L2 LINE L2 -93 3220 2921 2361 82 0 0 chr5 98774121 98774413 -100855737 - AluSc SINE Alu -6 303 12 255 236 56 56 chr5 98774447 98774519 -100855631 + L2 LINE L2 3191 3262 -10 2158 81 50 0 chr5 98774584 98774867 -100855283 + AluSg SINE Alu 1 297 -13 2270 87 3 0 chr5 98775182 98775468 -100854682 - AluSx SINE Alu -12 300 14 5907 87 37 26 chr5 98777288 98778085 -100852065 - L1PB1 LINE L1 -2 6149 5332 2149 104 4 0 chr5 98778085 98778364 -100851786 - AluSq SINE Alu -20 293 14 5907 87 37 26 chr5 98778364 98778553 -100851597 - L1PB1 LINE L1 -819 5332 5147 4575 176 72 24 chr5 98778609 98779642 -100850508 + Tigger6a DNA MER2_type 1 1082 -1 22 103 0 0 chr5 98781153 98781231 -100848919 + AT_rich Low_complexity Low_complexity 1 78 0 717 195 13 40 chr5 98783059 98783208 -100846942 + Charlie1 DNA MER1_type 1 145 -2616 258 96 0 0 chr5 98783483 98783532 -100846618 + MER5A DNA MER1_type 4 52 -137 1746 128 44 53 chr5 98783532 98783853 -100846297 + THE1B LTR MaLR 47 364 0 1609 188 0 27 chr5 98784653 98784946 -100845204 + AluJo SINE Alu 6 290 -22 1036 92 0 0 chr5 98786370 98786501 -100843649 - AluSq/x SINE Alu -180 133 3 2262 101 3 3 chr5 98786609 98786905 -100843245 + AluSc SINE Alu 1 296 -13 7925 132 26 28 chr5 98786916 98789378 -100840772 + L1MA3 LINE L1 3851 6305 0 404 267 20 62 chr5 98789519 98789665 -100840485 + L2 LINE L2 3170 3309 -4 23 0 0 0 chr5 98789741 98789764 -100840386 + AT_rich Low_complexity Low_complexity 1 23 0 937 191 32 16 chr5 98790009 98790198 -100839952 - MER20 DNA MER1_type 0 219 28 2453 54 0 0 chr5 98790313 98790609 -100839541 - AluY SINE Alu -15 296 1 301 311 107 8 chr5 98790735 98790857 -100839293 - MIR3 SINE MIR -6 202 69 21 36 0 0 chr5 98791527 98791555 -100838595 + AT_rich Low_complexity Low_complexity 1 28 0 361 250 29 19 chr5 98791688 98791792 -100838358 - L2 LINE L2 -5 3308 3204 2258 98 0 3 chr5 98792025 98792322 -100837828 + AluSg SINE Alu 1 296 -14 279 197 74 177 chr5 98792370 98792573 -100837577 - MIR SINE MIR 0 262 81 234 292 56 29 chr5 98792571 98792676 -100837474 - MIR SINE MIR -78 130 20 * 839 313 116 20 chr5 98792733 98793174 -100836976 - L2 LINE L2 -338 2976 2494 1311 219 117 28 chr5 98793342 98793771 -100836379 - MLT1C LTR MaLR 0 467 1 183 129 0 0 chr5 98793816 98793847 -100836303 + (CAT)n Simple_repeat Simple_repeat 2 32 0 2662 178 70 9 chr5 98793940 98794468 -100835682 - MER68 LTR ERV1 -1 561 2 310 296 14 92 chr5 98794487 98794629 -100835521 - MIR SINE MIR -124 138 8 254 265 83 48 chr5 98795343 98795509 -100834641 - MIR SINE MIR -38 224 51 261 311 67 0 chr5 98795791 98795876 -100834274 + MIR SINE MIR 22 115 -93 228 281 45 22 chr5 98795946 98796035 -100834115 - MIR SINE MIR -53 209 119 718 261 141 14 chr5 98797372 98797648 -100832502 - L2 LINE L2 -15 3298 2988 236 233 33 0 chr5 98797663 98797723 -100832427 - L2 LINE L2 -966 2348 2287 908 121 38 0 chr5 98797727 98797859 -100832291 + AluJo SINE Alu 5 141 -171 189 218 36 0 chr5 98797862 98797917 -100832233 - L2 LINE L2 -1027 2287 2231 1261 266 92 59 chr5 98798061 98798722 -100831428 - L2 LINE L2 -966 2348 1666 2321 109 0 0 chr5 98798828 98799132 -100831018 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr5 98800856 98800877 -100829273 + AT_rich Low_complexity Low_complexity 1 21 0 2069 132 14 0 chr5 98800877 98801173 -100828977 - AluSx SINE Alu -12 300 1 4273 157 60 23 chr5 98801192 98801997 -100828153 - L1MB8 LINE L1 -6 6983 6145 2259 102 0 16 chr5 98801997 98802302 -100827848 + AluY SINE Alu 1 300 -11 4273 157 60 23 chr5 98802302 98802326 -100827824 - L1MB8 LINE L1 -844 6145 6123 * 4502 221 49 66 chr5 98802323 98803631 -100826519 - L1MB8 LINE L1 -1062 5895 4567 711 237 52 17 chr5 98803631 98803804 -100826346 + MER8 DNA MER2_type 1 179 -60 4502 221 49 66 chr5 98803804 98803944 -100826206 - L1MB8 LINE L1 -2390 4567 4426 2366 73 7 3 chr5 98803944 98804246 -100825904 - AluSq SINE Alu -10 303 1 4502 221 49 66 chr5 98804246 98804788 -100825362 - L1MB8 LINE L1 -2531 4426 3900 2344 220 66 49 chr5 98804768 98805341 -100824809 - L1MB8 LINE L1 -6271 588 6 * 426 277 146 32 chr5 98805624 98805877 -100824273 + L1MC4a LINE L1 6428 6709 -1099 * 434 191 20 61 chr5 98805871 98806018 -100824132 + L1MC4 LINE L1 6860 7000 -1042 32 0 0 0 chr5 98806033 98806065 -100824085 + AT_rich Low_complexity Low_complexity 1 32 0 2539 58 0 3 chr5 98806065 98806377 -100823773 - AluY SINE Alu 0 311 1 739 283 113 30 chr5 98806507 98806772 -100823378 + LTR16A LTR ERVL 105 391 -59 243 216 14 54 chr5 98807527 98807601 -100822549 - MER112 DNA MER1_type -182 78 8 257 267 47 0 chr5 98858141 98858227 -100771923 + L1ME4a LINE L1 5845 5934 -187 31 58 0 0 chr5 98858352 98858404 -100771746 + AT_rich Low_complexity Low_complexity 1 52 0 1408 192 211 36 chr5 98858902 98859267 -100770883 - MER69 DNA AcHobo -797 429 1 3559 142 63 36 chr5 98859629 98860744 -100769406 + L1MA9 LINE L1 5043 6274 -38 369 0 0 0 chr5 98861109 98861150 -100769000 + (CA)n Simple_repeat Simple_repeat 2 42 0 374 290 0 9 chr5 98861234 98861341 -100768809 - L2 LINE L2 -50 3263 3158 339 302 79 12 chr5 98862565 98862725 -100767425 + MIR SINE MIR 3 174 -62 2222 105 0 0 chr5 98863535 98863841 -100766309 - AluSc SINE Alu -3 306 1 1983 94 22 11 chr5 98863966 98864278 -100765872 - AluSc SINE Alu 0 316 2 2022 72 33 4 chr5 98864522 98864830 -100765320 - AluSx SINE Alu 0 316 1 567 218 47 18 chr5 98865166 98865336 -100764814 - MER104 DNA Tc2 -3 177 3 27 62 0 0 chr5 98865947 98865995 -100764155 + AT_rich Low_complexity Low_complexity 1 48 0 494 294 170 22 chr5 98866196 98866430 -100763720 - L1MC4a LINE L1 -1940 5868 5670 402 21 0 0 chr5 98866430 98866477 -100763673 + (TA)n Simple_repeat Simple_repeat 2 48 0 494 294 170 22 chr5 98866477 98866647 -100763503 - L1MC4a LINE L1 -2138 5670 5404 913 179 6 6 chr5 98867075 98867231 -100762919 + FRAM SINE Alu 1 153 -23 27 87 0 0 chr5 98868430 98868499 -100761651 + AT_rich Low_complexity Low_complexity 1 69 0 2180 249 66 67 chr5 98868654 98869806 -100760344 + L1MC4a LINE L1 4987 5403 -743 301 288 139 13 chr5 98870059 98870380 -100759770 + L1M4 LINE L1 3914 4276 -1870 204 244 0 0 chr5 98871050 98871091 -100759059 + L2 LINE L2 3228 3268 -4 189 0 0 0 chr5 98874739 98874760 -100755390 + (A)n Simple_repeat Simple_repeat 1 21 0 289 296 9 61 chr5 98875580 98875695 -100754455 + MER5B DNA MER1_type 63 171 -7 26 0 0 0 chr5 98876490 98876516 -100753634 + AT_rich Low_complexity Low_complexity 1 26 0 794 195 27 0 chr5 98877295 98877444 -100752706 - MER58B DNA MER1_type -16 325 173 355 249 213 27 chr5 98878919 98879139 -100751011 - MIR SINE MIR -7 255 1 2340 73 7 0 chr5 98879208 98879509 -100750641 + AluSq SINE Alu 5 307 -6 233 304 116 89 chr5 98879870 98880320 -100749830 - L3 LINE CR1 0 1577 1116 574 235 94 66 chr5 98880355 98880568 -100749582 + LTR34 LTR ERV1 473 691 -8 389 152 89 0 chr5 98880889 98880968 -100749182 - Tigger5 DNA MER2_type 0 2323 2238 359 143 0 18 chr5 98880979 98881035 -100749115 - Tigger5 DNA MER2_type -2268 55 1 195 301 44 0 chr5 98881241 98881326 -100748824 - MIR SINE MIR -63 145 79 186 71 0 0 chr5 98883439 98883467 -100746683 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 274 338 31 25 chr5 98883609 98883769 -100746381 + L3b LINE CR1 1305 1465 -118 241 323 35 75 chr5 98883849 98884050 -100746100 + L2 LINE L2 2809 3001 -271 21 36 0 0 chr5 98884184 98884212 -100745938 + AT_rich Low_complexity Low_complexity 1 28 0 955 232 46 79 chr5 98885504 98885871 -100744279 - L2 LINE L2 -9 3304 2950 1087 284 173 65 chr5 98886386 98887897 -100742253 - L2 LINE L2 -1604 1710 38 192 352 0 0 chr5 98888441 98888495 -100741655 - L2 LINE L2 -32 3240 3187 1967 163 51 20 chr5 98888584 98888976 -100741174 - MER65C LTR ERV1 -48 413 10 227 271 250 0 chr5 98889629 98889725 -100740425 - MIR3 SINE MIR -52 156 37 23 0 0 0 chr5 98890287 98890310 -100739840 + AT_rich Low_complexity Low_complexity 1 23 0 752 127 22 0 chr5 98890717 98890851 -100739299 + L1MA9 LINE L1 6166 6302 -10 2014 119 10 7 chr5 98892132 98892425 -100737725 - AluSx SINE Alu -18 294 1 2255 92 3 0 chr5 98892458 98892763 -100737387 + AluSp SINE Alu 2 307 0 24 53 0 0 chr5 98892784 98892822 -100737328 + AT_rich Low_complexity Low_complexity 1 38 0 571 133 105 0 chr5 98893112 98893255 -100736895 - L1MC/D LINE L1 -2555 5440 5283 3858 79 25 108 chr5 98893263 98893868 -100736282 - L1PB1 LINE L1 -1 6150 5615 2183 117 3 3 chr5 98893868 98894168 -100735982 - AluSx SINE Alu -12 300 1 3858 79 25 108 chr5 98894168 98894294 -100735856 - L1PB1 LINE L1 -536 5615 5480 217 238 0 0 chr5 98895022 98895064 -100735086 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 371 241 0 0 chr5 98895065 98895144 -100735006 - L2 LINE L2 0 3313 3235 345 258 93 43 chr5 98895859 98896133 -100734017 + MARNA DNA Mariner 172 517 -69 2536 36 10 0 chr5 98897916 98898218 -100731932 + AluY SINE Alu 1 305 -6 2467 212 122 66 chr5 98899538 98900066 -100730084 + L1MC5 LINE L1 6745 7242 -719 1882 133 38 14 chr5 98900066 98900359 -100729791 + AluSx SINE Alu 1 300 -12 2467 212 122 66 chr5 98900359 98900981 -100729169 + L1MC5 LINE L1 7242 7914 -47 1231 154 3 77 chr5 98901648 98901972 -100728178 + AluSx SINE Alu 1 300 -2 625 162 0 0 chr5 98905148 98905247 -100724903 - U6 snRNA snRNA -8 99 1 2548 37 0 3 chr5 98906184 98906483 -100723667 - AluY SINE Alu -13 298 1 207 337 0 35 chr5 98906485 98906549 -100723601 + MIR SINE MIR 93 153 -109 370 318 85 0 chr5 98906549 98906678 -100723472 - MER91C DNA MER1_type 0 140 1 237 267 53 0 chr5 98906678 98906753 -100723397 + MIR SINE MIR 151 229 -33 515 243 176 16 chr5 98906960 98907096 -100723054 - HAL1b LINE L1 0 1348 1235 359 98 16 0 chr5 98907096 98907157 -100722993 + (TA)n Simple_repeat Simple_repeat 1 62 0 515 243 176 16 chr5 98907157 98907333 -100722817 - HAL1b LINE L1 -113 1235 986 1319 269 75 30 chr5 98907495 98908150 -100722000 - HAL1b LINE L1 -551 797 114 24 0 0 0 chr5 98908402 98908426 -100721724 + AT_rich Low_complexity Low_complexity 1 24 0 692 270 97 8 chr5 98908537 98908774 -100721376 - HAL1 LINE L1 -2225 282 25 22 0 0 0 chr5 98908784 98908806 -100721344 + AT_rich Low_complexity Low_complexity 1 22 0 250 87 43 0 chr5 98908936 98908982 -100721168 + (TCTG)n Simple_repeat Simple_repeat 1 48 0 180 0 0 0 chr5 98909681 98909701 -100720449 + (T)n Simple_repeat Simple_repeat 1 20 0 1050 127 57 0 chr5 98910596 98910753 -100719397 + AluSg/x SINE Alu 129 294 -16 440 319 25 4 chr5 98910764 98911005 -100719145 + L1M4 LINE L1 2722 2967 -3179 * 856 240 68 47 chr5 98911002 98911340 -100718810 + L1ME3A LINE L1 5821 6165 -5 519 276 11 23 chr5 98911878 98912052 -100718098 - MIR SINE MIR -18 244 73 353 329 43 61 chr5 98912276 98912440 -100717710 + MIR3 SINE MIR 34 194 -14 326 219 24 12 chr5 98912649 98912731 -100717419 - MER5A DNA MER1_type -106 83 1 31 58 0 0 chr5 98912769 98912821 -100717329 + AT_rich Low_complexity Low_complexity 1 52 0 1585 178 66 14 chr5 98913146 98913433 -100716717 + AluJo SINE Alu 1 302 -10 30 0 0 0 chr5 98914207 98914237 -100715913 + AT_rich Low_complexity Low_complexity 1 30 0 358 352 44 0 chr5 98914460 98914619 -100715531 + MIR SINE MIR 59 224 -38 308 296 240 34 chr5 98914744 98914923 -100715227 + MIR SINE MIR 41 256 -6 2107 113 3 13 chr5 98915200 98915509 -100714641 - AluY SINE Alu -5 306 1 4311 106 30 32 chr5 98915756 98916447 -100713703 - LTR8 LTR ERV1 -1 690 1 1748 131 12 17 chr5 98917062 98917404 -100712746 + MER61C LTR ERV1 1 434 0 1126 283 82 22 chr5 98917795 98918248 -100711902 - L2 LINE L2 0 3313 2834 309 323 32 0 chr5 98919886 98920010 -100710140 + L3 LINE CR1 1173 1300 -277 269 254 127 32 chr5 98920172 98920298 -100709852 + L3 LINE CR1 1277 1414 -163 2346 76 0 13 chr5 98920801 98921105 -100709045 - AluSg SINE Alu -10 300 1 2220 101 0 14 chr5 98921621 98921918 -100708232 - AluSq SINE Alu -20 293 1 2029 81 3 97 chr5 98922290 98922610 -100707540 - AluSg SINE Alu -20 290 1 193 269 34 94 chr5 98922956 98923105 -100707045 - MIR SINE MIR -9 253 114 328 317 49 36 chr5 98924388 98924532 -100705618 - MER20B DNA MER1_type -22 197 52 23 92 0 0 chr5 98926633 98926698 -100703452 + AT_rich Low_complexity Low_complexity 1 65 0 2263 117 99 10 chr5 98927125 98927518 -100702632 - MSTA LTR MaLR 0 428 1 2598 40 0 0 chr5 98927742 98928039 -100702111 + AluY SINE Alu 1 297 -14 22 0 0 0 chr5 98929601 98929623 -100700527 + AT_rich Low_complexity Low_complexity 1 22 0 494 318 14 0 chr5 98929997 98930145 -100700005 - L1MEd LINE L1 -5448 671 522 353 292 77 99 chr5 98930187 98930349 -100699801 - L1MEd LINE L1 -5738 381 228 2281 104 0 7 chr5 98930349 98930656 -100699494 + AluSx SINE Alu 1 305 -7 353 292 77 99 chr5 98930656 98930805 -100699345 - L1MEd LINE L1 -5891 228 77 482 285 146 6 chr5 98930806 98930964 -100699186 - MER5A DNA MER1_type 0 189 10 38 39 0 0 chr5 98932825 98932877 -100697273 + AT_rich Low_complexity Low_complexity 1 52 0 269 275 134 74 chr5 98933917 98933977 -100696173 - MIR3 SINE MIR -6 202 147 2850 6 0 3 chr5 98933977 98934289 -100695861 - AluYa5 SINE Alu 0 311 1 269 275 134 74 chr5 98934289 98934377 -100695773 - MIR3 SINE MIR -61 147 45 2460 64 0 3 chr5 98935846 98936143 -100694007 + AluY SINE Alu 1 296 -15 344 146 39 0 chr5 98936143 98936246 -100693904 + (TA)n Simple_repeat Simple_repeat 1 107 0 21 36 0 0 chr5 98936747 98936775 -100693375 + AT_rich Low_complexity Low_complexity 1 28 0 2007 171 56 21 chr5 98936867 98937353 -100692797 - L1MCa LINE L1 -3947 2479 1977 * 1262 183 175 8 chr5 98937358 98937609 -100692541 - AluJo SINE Alu -19 293 1 14920 191 40 9 chr5 98937609 98939295 -100690855 - L1 LINE L1 -3879 2969 1149 2973 86 40 7 chr5 98939295 98939725 -100690425 - MLT2A1 LTR ERVL 0 444 1 14920 191 40 9 chr5 98939725 98940902 -100689248 - L1 LINE L1 -5699 1149 10 890 255 108 10 chr5 98940920 98941226 -100688924 + L1M4 LINE L1 3536 3871 -2275 724 224 47 80 chr5 98941229 98941528 -100688622 + L1ME1 LINE L1 5873 6161 -5 2001 160 0 0 chr5 98941998 98942304 -100687846 + AluJo SINE Alu 1 306 -6 533 291 52 39 chr5 98942358 98942588 -100687562 - MIR SINE MIR -1 261 29 1678 231 120 46 chr5 98942732 98943560 -100686590 - L1M4 LINE L1 -1512 4634 3746 355 228 54 0 chr5 98945253 98945345 -100684805 - MIR SINE MIR 0 262 166 224 227 0 0 chr5 98945465 98945509 -100684641 + MIR SINE MIR 59 102 -160 263 309 21 10 chr5 98945938 98946035 -100684115 + L1PA12 LINE L1 2085 2182 -5399 3248 235 43 49 chr5 98946279 98946553 -100683597 + L1PA12 LINE L1 2182 2456 -5128 2604 107 51 10 chr5 98946553 98946964 -100683186 - MSTA LTR MaLR 0 428 1 3248 235 43 49 chr5 98946964 98947904 -100682246 + L1PA12 LINE L1 2456 3387 -4197 4919 118 70 24 chr5 98947904 98948620 -100681530 + L1PA16 LINE L1 4771 5453 -713 1704 184 20 7 chr5 98948620 98948924 -100681226 + AluJb SINE Alu 1 308 -4 4919 118 70 24 chr5 98948924 98949561 -100680589 + L1PA16 LINE L1 5453 6166 0 766 188 113 0 chr5 98950178 98950338 -100679812 + MER45A DNA AcHobo 1 178 0 2542 40 0 3 chr5 98951963 98952261 -100677889 + AluY SINE Alu 1 297 -14 359 314 29 35 chr5 98952624 98952796 -100677354 + L3 LINE CR1 800 970 -607 394 326 44 0 chr5 98953964 98954099 -100676051 + MIR SINE MIR 122 262 0 521 135 0 0 chr5 98954770 98954844 -100675306 + Tigger4(Zombi) DNA MER2_type 1 74 -2657 1557 238 28 45 chr5 98956284 98956754 -100673396 + LTR40b LTR ERVL 1 462 0 2074 122 3 16 chr5 98957026 98957330 -100672820 + AluSx SINE Alu 1 300 -12 222 349 9 57 chr5 98958732 98958838 -100671312 + MER5A DNA MER1_type 88 188 -1 2425 85 0 7 chr5 98959572 98959877 -100670273 - AluSp SINE Alu -10 303 1 21 57 0 0 chr5 98961341 98961376 -100668774 + AT_rich Low_complexity Low_complexity 1 35 0 320 202 191 0 chr5 98961426 98961510 -100668640 + MLT1D LTR MaLR 1 100 -405 2237 32 46 11 chr5 98962102 98962382 -100667768 - AluY SINE Alu -13 298 9 235 242 210 73 chr5 98963333 98963457 -100666693 - MIR SINE MIR -17 245 105 537 276 241 0 chr5 98964794 98964997 -100665153 + MIR SINE MIR 1 252 -10 487 254 59 0 chr5 98965016 98965134 -100665016 - MIR SINE MIR -92 170 46 498 306 25 0 chr5 98965979 98966139 -100664011 + L2 LINE L2 2212 2375 -939 535 289 22 109 chr5 98966149 98966506 -100663644 + L2 LINE L2 2636 2961 -353 232 222 77 51 chr5 98967075 98967192 -100662958 - L1ME3 LINE L1 -2 6160 6041 1208 274 81 31 chr5 98967902 98968381 -100661769 - L2 LINE L2 0 3313 2811 306 238 12 0 chr5 98969420 98969500 -100660650 - MER103 DNA DNA 0 166 86 254 196 0 0 chr5 98969559 98969615 -100660535 + Ricksha DNA DNA 26 81 -1965 * 674 116 83 8 chr5 98969613 98969734 -100660416 + Ricksha DNA DNA 372 501 -2745 10304 138 47 59 chr5 98969736 98971819 -100658331 + Ricksha DNA DNA 1189 3246 0 3166 130 36 5 chr5 98971959 98972513 -100657637 + Ricksha DNA DNA 2284 2854 0 283 266 16 0 chr5 98973012 98973076 -100657074 - L2 LINE L2 -45 3227 3163 228 189 0 19 chr5 98973077 98973130 -100657020 + (TA)n Simple_repeat Simple_repeat 2 53 0 247 309 0 25 chr5 98973745 98973826 -100656324 - MLT1L LTR MaLR -536 79 1 1325 164 18 51 chr5 98974198 98974288 -100655862 - MER33 DNA MER1_type -2266 319 228 2036 127 0 0 chr5 98974288 98974596 -100655554 + AluSx SINE Alu 1 308 0 1325 164 18 51 chr5 98974596 98974842 -100655308 - MER33 DNA MER1_type -2357 228 1 639 316 53 18 chr5 98974934 98975162 -100654988 - MIR SINE MIR -4 258 23 209 159 23 0 chr5 98975602 98975646 -100654504 + CT-rich Low_complexity Low_complexity 2 46 0 686 216 105 0 chr5 98975646 98975799 -100654351 + MLT1F1 LTR MaLR 188 356 -211 524 151 32 0 chr5 98975796 98975889 -100654261 + MLT1F1 LTR MaLR 468 563 -4 * 318 167 0 0 chr5 98976288 98976348 -100653802 + (TG)n Simple_repeat Simple_repeat 2 61 0 276 30 0 0 chr5 98976441 98976474 -100653676 + (TG)n Simple_repeat Simple_repeat 2 34 0 967 246 79 14 chr5 98977086 98977366 -100652784 + LTR16A LTR ERVL 16 313 -137 655 215 7 0 chr5 98977434 98977569 -100652581 + LTR16A LTR ERVL 310 445 -5 461 281 85 53 chr5 98978054 98978396 -100651754 + L1MEd LINE L1 685 1037 -5082 351 286 256 30 chr5 98978647 98978850 -100651300 + L2 LINE L2 2645 2893 -421 651 231 45 25 chr5 98978857 98979056 -100651094 + L2 LINE L2 3105 3307 -6 736 292 138 30 chr5 98979842 98980249 -100649901 + MLT1L LTR MaLR 152 602 -13 435 245 28 49 chr5 98980487 98980630 -100649520 + MER5A DNA MER1_type 50 189 0 29 28 0 0 chr5 98981218 98981254 -100648896 + AT_rich Low_complexity Low_complexity 1 36 0 311 246 0 15 chr5 98982841 98982906 -100647244 + MIR SINE MIR 20 83 -125 23 0 0 0 chr5 98983076 98983099 -100647051 + AT_rich Low_complexity Low_complexity 1 23 0 2101 186 14 14 chr5 98983099 98983275 -100646875 + MLT1C LTR MaLR 1 176 -291 540 45 0 0 chr5 98983275 98983342 -100646808 + (TATG)n Simple_repeat Simple_repeat 4 70 0 2101 186 14 14 chr5 98983342 98983600 -100646550 + MLT1C LTR MaLR 175 435 -32 236 271 82 12 chr5 98983675 98983760 -100646390 - MIR SINE MIR -61 201 111 398 301 181 5 chr5 98984835 98985034 -100645116 + L2 LINE L2 2854 3087 -226 2086 124 0 0 chr5 98985290 98985612 -100644538 - AluSx SINE Alu 0 322 1 23 0 0 0 chr5 98986349 98986372 -100643778 + AT_rich Low_complexity Low_complexity 1 23 0 452 261 42 34 chr5 98986808 98986927 -100643223 - MIR3 SINE MIR -49 159 40 2433 65 0 13 chr5 98988284 98988592 -100641558 - AluY SINE Alu -7 304 1 27 0 0 0 chr5 98989483 98989510 -100640640 + AT_rich Low_complexity Low_complexity 1 27 0 253 254 17 0 chr5 98990091 98990150 -100640000 - MIR SINE MIR -67 141 82 492 232 191 6 chr5 98990156 98990324 -100639826 - MIR SINE MIR -1 261 63 6637 45 11 1 chr5 98991240 98992108 -100638042 - L1PA7 LINE L1 -2 6152 5276 663 307 24 28 chr5 98993220 98993471 -100636679 + MIR SINE MIR 13 262 0 1101 250 65 34 chr5 98993724 98993774 -100636376 + MSTD LTR MaLR 1 48 -348 2372 100 0 0 chr5 98993774 98994074 -100636076 - AluY SINE Alu -11 300 1 1101 250 65 34 chr5 98994074 98994360 -100635790 + MSTD LTR MaLR 48 353 -43 2100 141 0 0 chr5 98994360 98994651 -100635499 - AluSx SINE Alu -21 291 1 1101 250 65 34 chr5 98994651 98994697 -100635453 + MSTD LTR MaLR 353 396 0 339 278 62 10 chr5 98994933 98995030 -100635120 + MER91B DNA MER1_type 27 128 -62 1694 156 3 0 chr5 98995135 98995418 -100634732 + Tigger3(Golem) DNA MER2_type 29 312 -2717 6761 146 41 55 chr5 98995418 98996354 -100633796 - L1MA5 LINE L1 -6 6294 5346 2210 133 0 0 chr5 98996354 98996656 -100633494 - AluSx SINE Alu -9 303 2 6761 146 41 55 chr5 98996656 98997898 -100632252 - L1MA5 LINE L1 -954 5346 4036 842 109 58 0 chr5 98997898 98998036 -100632114 - Tigger3(Golem) DNA MER2_type -659 2370 2225 6761 146 41 55 chr5 98998036 98998324 -100631826 - L1MA5 LINE L1 -2264 4036 3745 735 105 92 7 chr5 98998390 98998542 -100631608 + Tigger3(Golem) DNA MER2_type 2304 2468 -561 1736 143 40 30 chr5 98998642 98998971 -100631179 + Tigger3(Golem) DNA MER2_type 2697 3028 -1 296 279 162 30 chr5 98999226 98999420 -100630730 - MIR SINE MIR -13 249 31 514 291 69 49 chr5 98999630 98999877 -100630273 + MIR SINE MIR 5 256 -6 2438 248 64 139 chr5 99000354 99001076 -100629074 + L2 LINE L2 1074 1848 -1465 1059 198 96 66 chr5 99001076 99001232 -100628918 + MLT1A2 LTR MaLR 1 151 -223 1844 149 20 30 chr5 99001232 99001533 -100628617 + AluJb SINE Alu 1 298 -14 1059 198 96 66 chr5 99001533 99001739 -100628411 + MLT1A2 LTR MaLR 151 374 0 2438 248 64 139 chr5 99001739 99003278 -100626872 + L2 LINE L2 1848 3157 -156 3515 85 12 0 chr5 99003278 99003758 -100626392 - LTR19A LTR ERV1 0 486 1 2438 248 64 139 chr5 99003758 99003891 -100626259 + L2 LINE L2 3157 3298 -15 343 181 134 47 chr5 99004968 99005095 -100625055 - MIR SINE MIR -10 252 115 409 244 144 50 chr5 99005279 99005459 -100624691 - L2 LINE L2 0 3313 3117 247 228 62 95 chr5 99006477 99006802 -100623348 - L1ME4a LINE L1 -157 5964 5651 1040 95 85 11 chr5 99006814 99007116 -100623034 + THE1C LTR MaLR 1 375 0 503 313 97 15 chr5 99007189 99007528 -100622622 + L1ME3 LINE L1 5562 5928 -193 2123 128 7 10 chr5 99008559 99008841 -100621309 + AluSq SINE Alu 1 283 -30 270 0 0 0 chr5 99008841 99008871 -100621279 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 2123 128 7 10 chr5 99008871 99008885 -100621265 + AluSq SINE Alu 283 296 -17 464 265 13 7 chr5 99008929 99009080 -100621070 + L1ME3 LINE L1 5998 6149 -13 1290 180 25 8 chr5 99011019 99011264 -100618886 + L1PB1 LINE L1 5 253 -6777 256 301 21 38 chr5 99011341 99011527 -100618623 + MLT1K LTR MaLR 404 586 -2 22 0 0 0 chr5 99011755 99011777 -100618373 + AT_rich Low_complexity Low_complexity 1 22 0 307 301 31 68 chr5 99011843 99012006 -100618144 - L1MC4 LINE L1 -1338 6704 6548 2074 155 34 47 chr5 99012098 99012668 -100617482 - MLT2A2 LTR ERVL -8 546 3 320 167 167 0 chr5 99013819 99013885 -100616265 - MER81 DNA DNA -6 108 32 355 256 137 75 chr5 99016216 99016334 -100613816 + L1ME4a LINE L1 5710 5819 -302 1219 206 11 21 chr5 99016334 99016615 -100613535 + L1PB4 LINE L1 5873 6150 -6 355 256 137 75 chr5 99016615 99016882 -100613268 + L1ME4a LINE L1 5819 6119 -2 417 316 9 0 chr5 99017028 99017142 -100613008 + MIR SINE MIR 39 153 -55 14226 195 26 8 chr5 99017151 99020633 -100609517 + L1PB1 LINE L1 252 3668 -3443 207 0 0 0 chr5 99020633 99020656 -100609494 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 14226 195 26 8 chr5 99020656 99023606 -100606544 + L1PB1 LINE L1 3668 7110 -1 809 191 19 0 chr5 99023837 99023994 -100606156 - MER5A DNA MER1_type -1 188 29 410 0 0 20 chr5 99024061 99024112 -100606038 + (TC)n Simple_repeat Simple_repeat 1 50 0 548 196 14 36 chr5 99024194 99024546 -100605604 + GA-rich Low_complexity Low_complexity 1 344 0 186 43 0 0 chr5 99024737 99024760 -100605390 + (TCCC)n Simple_repeat Simple_repeat 4 26 0 7001 48 15 1 chr5 99027387 99028507 -100601643 + L1PA5 LINE L1 5024 6154 0 631 279 91 42 chr5 99029993 99030280 -100599870 - MLT1K LTR MaLR -160 428 128 563 226 48 60 chr5 99030480 99030648 -100599502 - MER5B DNA MER1_type -7 171 6 198 0 0 0 chr5 99031006 99031028 -100599122 + (A)n Simple_repeat Simple_repeat 1 22 0 954 223 39 48 chr5 99031976 99032313 -100597837 + L1MC5 LINE L1 6974 7307 -654 322 203 36 7 chr5 99032326 99032464 -100597686 + (TCTA)n Simple_repeat Simple_repeat 1 142 0 796 237 47 43 chr5 99032467 99033007 -100597143 + L1MC5 LINE L1 7307 7878 -83 1089 199 87 21 chr5 99033038 99033324 -100596826 + LTR52 LTR ERVL 1 305 -116 235 277 40 81 chr5 99033312 99033460 -100596690 + MER21B LTR ERV1 567 708 -155 * 686 219 20 98 chr5 99033854 99034100 -100596050 - L2 LINE L2 0 3313 3087 630 268 32 0 chr5 99034161 99034318 -100595832 + MER45A DNA AcHobo 17 178 0 207 308 42 28 chr5 99034319 99034462 -100595688 - L2 LINE L2 -300 2972 2828 2048 122 46 68 chr5 99034538 99034906 -100595244 - THE1B LTR MaLR -4 360 1 326 281 200 0 chr5 99035911 99036046 -100594104 - MIR SINE MIR -12 250 89 891 288 115 20 chr5 99036818 99037217 -100592933 + L2 LINE L2 2873 3309 -4 573 306 64 14 chr5 99038511 99038808 -100591342 + MLT1K LTR MaLR 154 465 -123 829 239 92 26 chr5 99039172 99039478 -100590672 - MLT1J2 LTR MaLR -124 326 1 262 314 20 39 chr5 99039591 99039693 -100590457 - MIR SINE MIR -117 145 46 342 196 14 105 chr5 99039717 99039755 -100590395 + MER113 DNA MER1_type? 1 41 -480 1763 186 105 19 chr5 99039755 99040185 -100589965 + MLT1C LTR MaLR 1 467 0 342 196 14 105 chr5 99040185 99040289 -100589861 + MER113 DNA MER1_type? 41 130 -391 5105 33 0 0 chr5 99040904 99041503 -100588647 + L1PA4 LINE L1 5546 6144 -11 11302 40 9 8 chr5 99042440 99043664 -100586486 - L1P2 LINE L1 -609 5545 4319 2529 36 0 13 chr5 99043664 99043970 -100586180 + AluY SINE Alu 1 302 -9 11302 40 9 8 chr5 99043970 99044369 -100585781 - L1P2 LINE L1 -1835 4319 3922 7828 72 3 2 chr5 99044367 99045486 -100584664 + L1P LINE L1 2577 3696 -2450 * 28927 42 1 1 chr5 99045587 99049357 -100580793 - L1P LINE L1 -940 5206 1436 2309 108 3 0 chr5 99049723 99050020 -100580130 - AluSx SINE Alu -14 298 1 626 279 92 17 chr5 99050020 99050368 -100579782 - L1MC4a LINE L1 -1902 5906 5533 409 285 51 15 chr5 99050401 99050538 -100579612 - MIR SINE MIR -75 187 46 236 289 156 0 chr5 99050819 99050909 -100579241 - MIR SINE MIR -155 107 4 2296 99 0 0 chr5 99051867 99052183 -100577967 + AluSc SINE Alu 1 316 0 559 289 103 20 chr5 99052849 99053053 -100577097 - MIR SINE MIR 0 262 42 1375 197 56 83 chr5 99053053 99053536 -100576614 - MLT1D LTR MaLR 0 505 36 390 224 112 0 chr5 99054661 99054777 -100575373 - MLT1H LTR MaLR 0 549 421 568 247 156 13 chr5 99054843 99055112 -100575038 - MLT1H LTR MaLR -274 275 1 2131 182 88 4 chr5 99055144 99055601 -100574549 - MLT1D LTR MaLR -5 500 6 318 253 0 0 chr5 99055962 99056061 -100574089 + CT-rich Low_complexity Low_complexity 2 100 0 1991 126 58 30 chr5 99056122 99056487 -100573663 - THE1C LTR MaLR 0 375 1 198 336 41 8 chr5 99056885 99057007 -100573143 - L2 LINE L2 -2469 845 720 21 57 0 0 chr5 99057167 99057202 -100572948 + AT_rich Low_complexity Low_complexity 1 35 0 1602 145 40 47 chr5 99057544 99057841 -100572309 - AluJb SINE Alu -7 305 11 1989 150 10 65 chr5 99057988 99058374 -100571776 - MLT1A1 LTR MaLR 0 365 1 1424 167 16 82 chr5 99058695 99059081 -100571069 + MER67C LTR ERV1 1 389 -241 2290 123 0 0 chr5 99059267 99059575 -100570575 + AluSg SINE Alu 3 310 0 1070 199 86 33 chr5 99059635 99059745 -100570405 - L1P LINE L1 -976 5170 5067 1555 89 36 18 chr5 99059745 99059970 -100570180 - MER30 DNA MER1_type 0 230 2 1070 199 86 33 chr5 99059970 99060160 -100569990 - L1P LINE L1 -1079 5067 4854 3203 169 10 5 chr5 99060161 99060763 -100569387 + L1PB4 LINE L1 5549 6153 -3 407 221 0 0 chr5 99061037 99061123 -100569027 - MLT1K LTR MaLR -20 568 483 405 275 8 42 chr5 99061151 99061271 -100568879 - L2 LINE L2 -9 3304 3189 676 268 65 77 chr5 99061300 99061718 -100568432 - MLT1K LTR MaLR -145 443 31 717 243 110 0 chr5 99061752 99061925 -100568225 + MIR SINE MIR 9 200 -62 242 214 0 18 chr5 99062155 99062211 -100567939 - MLT1K LTR MaLR -532 56 2 260 363 0 0 chr5 99062349 99062440 -100567710 + MIR3 SINE MIR 102 192 -16 35 0 0 0 chr5 99062461 99062496 -100567654 + AT_rich Low_complexity Low_complexity 1 35 0 1506 256 110 45 chr5 99062499 99063049 -100567101 - HAL1 LINE L1 -10 2497 1875 1301 143 155 23 chr5 99063049 99063314 -100566836 - AluJo SINE Alu -2 300 1 1506 256 110 45 chr5 99063314 99063583 -100566567 - HAL1 LINE L1 -632 1875 1625 2603 225 114 88 chr5 99063584 99063615 -100566535 - HAL1 LINE L1 -1030 1477 1448 707 212 69 37 chr5 99063615 99063832 -100566318 - MER58A DNA MER1_type 0 224 1 2603 225 114 88 chr5 99063832 99064369 -100565781 - HAL1 LINE L1 -1059 1448 926 2112 118 7 0 chr5 99064369 99064658 -100565492 - AluSx SINE Alu -21 291 1 2603 225 114 88 chr5 99064658 99065506 -100564644 - HAL1 LINE L1 -1581 926 23 284 313 23 0 chr5 99065683 99065811 -100564339 - L1ME LINE L1 -377 5744 5614 2365 99 0 0 chr5 99066172 99066476 -100563674 - AluSg SINE Alu -6 304 1 358 343 99 6 chr5 99066746 99066918 -100563232 - MIR SINE MIR -74 188 1 238 355 13 0 chr5 99067659 99067735 -100562415 + L3 LINE CR1 1498 1574 -3 489 306 57 18 chr5 99067786 99068015 -100562135 + MIR SINE MIR 14 251 -11 213 194 28 14 chr5 99068122 99068194 -100561956 + GA-rich Low_complexity Low_complexity 1 73 0 216 275 367 0 chr5 99068848 99068968 -100561182 - MIR SINE MIR -21 241 78 2258 107 23 71 chr5 99069686 99070016 -100560134 + THE1C LTR MaLR 1 311 -64 2093 145 0 3 chr5 99070016 99070327 -100559823 + AluSx SINE Alu 1 310 -2 2258 107 23 71 chr5 99070327 99070390 -100559760 + THE1C LTR MaLR 311 375 0 966 182 27 16 chr5 99071588 99071775 -100558375 + MER5A DNA MER1_type 1 189 0 530 227 31 0 chr5 99071915 99072043 -100558107 - MER94 DNA DNA -2 132 1 21 0 0 0 chr5 99072564 99072585 -100557565 + AT_rich Low_complexity Low_complexity 1 21 0 623 257 0 20 chr5 99072594 99072746 -100557404 - MIR3 SINE MIR -21 187 39 3203 158 7 4 chr5 99073462 99074012 -100556138 - L1PA16 LINE L1 -16 6150 5599 1928 134 22 0 chr5 99074076 99074450 -100555700 - L1PA16 LINE L1 -557 5599 5219 21 0 0 0 chr5 99074630 99074651 -100555499 + AT_rich Low_complexity Low_complexity 1 21 0 200 324 69 55 chr5 99074851 99074996 -100555154 - MIR3 SINE MIR -28 180 34 21 71 0 0 chr5 99075067 99075109 -100555041 + AT_rich Low_complexity Low_complexity 1 42 0 831 272 8 51 chr5 99075995 99076252 -100553898 - MIR SINE MIR -11 251 6 290 319 32 0 chr5 99076236 99076330 -100553820 - L2 LINE L2 -25 3247 3151 * 3294 147 51 137 chr5 99076747 99077670 -100552480 - MER21A LTR ERV1 -17 914 71 306 98 0 66 chr5 99077780 99077841 -100552309 - MER21A LTR ERV1 -861 70 14 794 186 0 0 chr5 99078954 99079083 -100551067 - FLAM_A SINE Alu 0 133 5 1619 184 3 12 chr5 99080462 99080789 -100549361 + L1MA9 LINE L1 5979 6302 -10 475 275 35 18 chr5 99080943 99081114 -100549036 + MER5A DNA MER1_type 16 189 0 529 228 60 48 chr5 99081393 99081560 -100548590 - MIR SINE MIR -47 215 47 22 70 0 0 chr5 99081641 99081684 -100548466 + AT_rich Low_complexity Low_complexity 1 43 0 312 288 14 50 chr5 99081818 99081957 -100548193 + L2 LINE L2 1877 2010 -1304 432 234 47 0 chr5 99082242 99082349 -100547801 - L2 LINE L2 -4 3309 3198 240 35 0 0 chr5 99082349 99082378 -100547772 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1637 133 36 42 chr5 99082384 99082721 -100547429 - L1MA8 LINE L1 -19 6272 5938 1457 159 0 0 chr5 99082731 99082976 -100547174 - L1MA8 LINE L1 -425 5866 5622 1858 263 118 54 chr5 99082977 99083554 -100546596 - L2 LINE L2 -111 3202 2565 1656 176 7 33 chr5 99083554 99083860 -100546290 + AluJo SINE Alu 6 303 -9 1858 263 118 54 chr5 99083860 99084105 -100546045 - L2 LINE L2 -748 2565 2337 378 306 36 26 chr5 99084112 99084305 -100545845 + L2 LINE L2 3115 3309 -4 5552 146 20 15 chr5 99084645 99085830 -100544320 + L1MA6 LINE L1 5107 6295 -5 434 302 34 7 chr5 99086447 99086596 -100543554 - MIR SINE MIR -10 252 100 285 244 47 63 chr5 99086598 99086725 -100543425 + L2 LINE L2 3189 3313 0 21 57 0 0 chr5 99087048 99087083 -100543067 + AT_rich Low_complexity Low_complexity 1 35 0 646 323 81 61 chr5 99087143 99088093 -100542057 - L1M4 LINE L1 -1495 4651 3683 312 250 125 40 chr5 99088257 99088433 -100541717 - L1ME LINE L1 -447 5723 5533 299 219 65 30 chr5 99088588 99088757 -100541393 - L1ME LINE L1 -798 5348 5174 482 170 60 0 chr5 99088885 99088985 -100541165 + Charlie1 DNA MER1_type 2631 2736 -25 1654 151 89 19 chr5 99089377 99089749 -100540401 - Charlie1b DNA MER1_type -125 398 1 225 234 117 11 chr5 99089749 99089843 -100540307 + LTR33 LTR ERVL 416 519 -2 3349 114 61 51 chr5 99090516 99090840 -100539310 - MER4B LTR ERV1 0 610 276 2008 149 20 0 chr5 99090840 99091142 -100539008 + AluSx SINE Alu 1 308 -4 3349 114 61 51 chr5 99091142 99091421 -100538729 - MER4B LTR ERV1 -334 276 1 1583 237 58 50 chr5 99092943 99093506 -100536644 + MLT1E2 LTR MaLR 1 564 -62 2104 112 0 3 chr5 99093506 99093811 -100536339 - L1MC1 LINE L1 0 6333 6030 1583 237 58 50 chr5 99093811 99093875 -100536275 + MLT1E2 LTR MaLR 564 626 0 329 298 107 12 chr5 99093937 99094105 -100536045 - MLT1L LTR MaLR -84 531 348 619 271 156 32 chr5 99094187 99094501 -100535649 + MLT1J LTR MaLR 1 353 -158 670 216 114 71 chr5 99094952 99095249 -100534901 - LTR16C LTR ERVL 0 491 182 393 337 74 12 chr5 99095493 99095656 -100534494 - MIR3 SINE MIR -3 205 33 365 254 61 18 chr5 99096639 99096753 -100533397 + MIR SINE MIR 34 152 -56 192 244 22 0 chr5 99096807 99096852 -100533298 + L2 LINE L2 2486 2531 -783 943 177 6 0 chr5 99096861 99097019 -100533131 - FRAM SINE Alu -7 159 1 1058 278 53 55 chr5 99097019 99097541 -100532609 + L2 LINE L2 2514 3030 -283 200 289 58 0 chr5 99097797 99097849 -100532301 + L2 LINE L2 3010 3064 -208 1171 222 132 16 chr5 99099153 99099540 -100530610 - L1MD2 LINE L1 -10 6349 5918 219 210 177 0 chr5 99099635 99099697 -100530453 - MIR SINE MIR -28 234 162 1069 262 54 71 chr5 99099727 99100106 -100530044 + L2 LINE L2 2708 3083 -230 858 139 67 17 chr5 99100106 99100286 -100529864 + MER53 DNA DNA 1 189 0 1069 262 54 71 chr5 99100286 99100502 -100529648 + L2 LINE L2 3083 3301 -12 231 88 0 0 chr5 99101752 99101786 -100528364 + (CCG)n Simple_repeat Simple_repeat 3 36 0 338 98 0 16 chr5 99101816 99101877 -100528273 + (GGA)n Simple_repeat Simple_repeat 1 60 0 21 0 0 0 chr5 99101983 99102004 -100528146 + GC_rich Low_complexity Low_complexity 1 21 0 207 259 0 0 chr5 99102328 99102382 -100527768 + CT-rich Low_complexity Low_complexity 2 55 0 482 282 174 14 chr5 99104303 99104516 -100525634 - MIR SINE MIR -6 256 10 2379 90 3 0 chr5 99107473 99107772 -100522378 - AluSp SINE Alu -13 300 1 2217 70 0 11 chr5 99109466 99109785 -100520365 - AluY SINE Alu 0 316 1 2345 91 13 0 chr5 99109895 99110202 -100519948 + AluSq SINE Alu 1 311 -2 986 185 144 38 chr5 99110650 99110942 -100519208 + MER33 DNA MER1_type 2 324 0 703 285 53 7 chr5 99110966 99111247 -100518903 - MER102a DNA MER1_type -9 321 28 241 315 80 66 chr5 99111446 99111567 -100518583 - L2 LINE L2 -1444 1870 1752 2291 66 0 0 chr5 99111567 99111841 -100518309 + AluY SINE Alu 37 310 -1 241 315 80 66 chr5 99111841 99112157 -100517993 - L2 LINE L2 -1562 1752 1427 30 77 0 0 chr5 99114686 99114751 -100515399 + AT_rich Low_complexity Low_complexity 1 65 0 2204 128 0 0 chr5 99115523 99115821 -100514329 - AluSx SINE Alu -14 298 1 736 231 140 5 chr5 99116004 99116225 -100513925 - MIR SINE MIR 0 262 12 330 269 84 72 chr5 99116571 99116738 -100513412 - MIR SINE MIR -57 205 37 521 329 92 17 chr5 99117272 99117512 -100512638 - MIR SINE MIR 0 262 5 1906 188 107 19 chr5 99117551 99118019 -100512131 - LTR22 LTR ERVK 0 509 1 278 180 141 118 chr5 99121438 99121693 -100508457 - MLT1K LTR MaLR -16 572 312 229 286 135 23 chr5 99121764 99121897 -100508253 - MLT1K LTR MaLR -386 202 55 392 257 201 0 chr5 99122629 99122773 -100507377 + MIR SINE MIR 87 259 -3 28 0 0 0 chr5 99123660 99123688 -100506462 + AT_rich Low_complexity Low_complexity 1 28 0 652 255 88 50 chr5 99124321 99124705 -100505445 + LTR16A LTR ERVL 22 420 -30 362 271 33 7 chr5 99125497 99125648 -100504502 + L1ME LINE L1 5634 5788 -333 4407 79 5 24 chr5 99125670 99126292 -100503858 - LTR66 LTR ERVL 0 610 1 7313 58 1 4 chr5 99126293 99127699 -100502451 - HERVL66 LTR ERVL -1 4328 2807 5583 153 34 20 chr5 99127740 99128638 -100501512 - L1MC3 LINE L1 -8 7777 6861 471 35 0 0 chr5 99128638 99128695 -100501455 + (TG)n Simple_repeat Simple_repeat 2 58 0 5583 153 34 20 chr5 99128695 99128871 -100501279 - L1MC3 LINE L1 -924 6861 6689 24 32 0 0 chr5 99129119 99129150 -100501000 + AT_rich Low_complexity Low_complexity 1 31 0 844 226 81 0 chr5 99129784 99130018 -100500132 - LTR33A LTR ERVL -2 521 269 272 264 0 14 chr5 99130259 99130331 -100499819 + CT-rich Low_complexity Low_complexity 2 72 0 366 299 47 0 chr5 99131164 99131271 -100498879 - L2 LINE L2 -5 3267 3156 475 198 163 70 chr5 99131369 99131596 -100498554 + MER112 DNA MER1_type 1 248 -12 809 241 65 26 chr5 99132002 99132234 -100497916 + MIR SINE MIR 14 254 -8 906 222 31 73 chr5 99133820 99133882 -100496268 + MIR SINE MIR 13 76 -186 4039 123 25 24 chr5 99133882 99134589 -100495561 + MER67C LTR ERV1 3 710 0 906 222 31 73 chr5 99134589 99134787 -100495363 + MIR SINE MIR 76 262 0 726 315 122 38 chr5 99135040 99135544 -100494606 + L2 LINE L2 2762 3312 -1 427 362 31 18 chr5 99135752 99135976 -100494174 - MIR SINE MIR -32 230 4 1101 260 57 0 chr5 99135998 99136298 -100493852 - LTR40b LTR ERVL 0 462 146 10778 67 18 0 chr5 99136323 99138524 -100491626 - L1PA6 LINE L1 -6 6148 3922 8626 70 2 2 chr5 99138524 99139741 -100490409 + L1P LINE L1 2579 3796 -2350 * 14272 126 33 22 chr5 99139736 99142250 -100487900 - L1PA6 LINE L1 -3569 2577 37 283 183 0 0 chr5 99142267 99142327 -100487823 - L1ME LINE L1 -379 5785 5726 431 278 80 21 chr5 99142373 99142560 -100487590 - LTR40a LTR ERVL -321 198 1 336 309 124 86 chr5 99142566 99143041 -100487109 + L2 LINE L2 2394 2886 -428 1331 234 46 37 chr5 99143578 99144032 -100486118 - L1ME1 LINE L1 -5 6161 5704 183 313 0 31 chr5 99145358 99145422 -100484728 + L2 LINE L2 3252 3313 0 213 39 0 0 chr5 99145566 99145592 -100484558 + (GA)n Simple_repeat Simple_repeat 1 26 0 196 400 210 0 chr5 99145847 99145947 -100484203 - L2 LINE L2 -15 3257 3137 27 73 0 0 chr5 99146383 99146438 -100483712 + AT_rich Low_complexity Low_complexity 1 55 0 249 52 0 172 chr5 99149106 99149164 -100480986 + MADE1 DNA Mariner 33 80 0 428 297 94 9 chr5 99149500 99149712 -100480438 - MLT1L LTR MaLR -33 582 353 275 347 94 40 chr5 99149971 99150248 -100479902 + L3b LINE CR1 1245 1536 -47 342 250 22 22 chr5 99150422 99150514 -100479636 - MER5A DNA MER1_type -7 182 91 565 247 31 19 chr5 99150515 99150677 -100479473 - MLT1E2 LTR MaLR -2 624 461 392 188 12 0 chr5 99150679 99150764 -100479386 - L1MEc LINE L1 -1879 4336 4251 261 149 0 0 chr5 99150873 99150920 -100479230 - L1PA12 LINE L1 -2 6166 6120 2675 215 53 17 chr5 99150957 99151831 -100478319 - L1MEc LINE L1 -1938 4277 3373 284 289 89 26 chr5 99151839 99152029 -100478121 + LTR68 LTR ERV1 7 208 -532 243 265 114 23 chr5 99152129 99152261 -100477889 + LTR68 LTR ERV1 289 432 -308 3251 230 34 41 chr5 99152429 99152859 -100477291 - L1MEc LINE L1 -2856 3359 2928 2474 73 0 3 chr5 99152859 99153162 -100476988 + AluY SINE Alu 1 302 -9 3251 230 34 41 chr5 99153162 99153768 -100476382 - L1MEc LINE L1 -3287 2928 2319 1972 92 4 4 chr5 99153768 99154030 -100476120 + AluY SINE Alu 39 300 -11 3251 230 34 41 chr5 99154030 99154341 -100475809 - L1MEc LINE L1 -3896 2319 2053 1035 226 28 0 chr5 99154341 99154553 -100475597 + MER20 DNA MER1_type 2 219 0 3251 230 34 41 chr5 99154553 99154864 -100475286 - L1MEc LINE L1 -4162 2053 1741 561 285 12 70 chr5 99154869 99155125 -100475025 - L1MEc LINE L1 -6120 276 36 183 80 0 0 chr5 99155125 99155150 -100475000 + (TA)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr5 99155328 99155351 -100474799 + AT_rich Low_complexity Low_complexity 1 23 0 906 70 86 0 chr5 99155761 99155889 -100474261 - MER85 DNA T2_type 0 139 1 708 241 66 0 chr5 99156046 99156212 -100473938 + MIR SINE MIR 13 189 -73 317 280 8 0 chr5 99156212 99156330 -100473820 + (TA)n Simple_repeat Simple_repeat 2 120 0 2094 85 44 0 chr5 99156733 99157005 -100473145 - AluSg SINE Alu -16 294 11 229 338 0 0 chr5 99157204 99157275 -100472875 + L2 LINE L2 2717 2787 -527 2822 108 19 14 chr5 99157466 99157892 -100472258 - MSTA LTR MaLR 0 428 1 246 32 0 0 chr5 99157990 99158021 -100472129 + (TC)n Simple_repeat Simple_repeat 2 32 0 195 398 51 20 chr5 99158536 99158634 -100471516 + L2 LINE L2 3079 3179 -93 23 0 0 0 chr5 99160163 99160186 -100469964 + AT_rich Low_complexity Low_complexity 1 23 0 919 94 94 35 chr5 99160319 99160490 -100469660 + L1PB1 LINE L1 5970 6150 -1 1942 162 0 10 chr5 99161681 99161984 -100468166 + AluJb SINE Alu 1 300 -12 285 29 0 0 chr5 99162994 99163028 -100467122 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 1979 147 3 0 chr5 99163035 99163321 -100466829 - AluJb SINE Alu -25 287 1 1154 214 43 36 chr5 99163360 99163641 -100466509 + MLT2D LTR ERVL 91 373 -41 778 196 8 107 chr5 99164084 99164272 -100465878 + MLT1J LTR MaLR 5 141 -309 640 199 26 33 chr5 99164279 99164430 -100465720 + MLT1J LTR MaLR 288 437 -74 24 32 0 0 chr5 99166198 99166229 -100463921 + AT_rich Low_complexity Low_complexity 1 31 0 1005 231 107 43 chr5 99166958 99167091 -100463059 + MER113 DNA MER1_type? 5 128 -393 2536 57 0 3 chr5 99167091 99167391 -100462759 - AluY SINE Alu -12 299 1 1005 231 107 43 chr5 99167391 99167496 -100462654 + MER113 DNA MER1_type? 128 225 -296 1987 185 6 0 chr5 99167496 99167842 -100462308 + MER7A DNA MER2_type 1 346 0 1005 231 107 43 chr5 99167842 99168087 -100462063 + MER113 DNA MER1_type? 225 520 -1 212 237 17 34 chr5 99168168 99168227 -100461923 - L2 LINE L2 -61 3252 3195 24 32 0 0 chr5 99168732 99168763 -100461387 + AT_rich Low_complexity Low_complexity 1 31 0 279 327 0 0 chr5 99170824 99170934 -100459216 + A-rich Low_complexity Low_complexity 1 110 0 14037 35 1 0 chr5 99171469 99173930 -100456220 - L1PA4 LINE L1 -2 6153 3686 22064 155 19 16 chr5 99173944 99177168 -100452982 + L1M1 LINE L1 13 3258 -4307 1798 117 12 0 chr5 99177168 99177439 -100452711 + AluSx SINE Alu 32 305 0 22064 155 19 16 chr5 99177439 99179165 -100450985 + L1M1 LINE L1 3258 4978 -2587 743 83 0 0 chr5 99179174 99179282 -100450868 - L1PB1 LINE L1 0 6151 6044 482 134 12 0 chr5 99179289 99179371 -100450779 + L1M1 LINE L1 5946 6028 -1537 495 138 3 11 chr5 99179376 99179468 -100450682 - L1PB1 LINE L1 -292 5859 5767 847 125 20 3 chr5 99179486 99179644 -100450506 - L1M1 LINE L1 -360 5791 5651 * 5022 92 24 44 chr5 99179637 99180465 -100449685 - L1PB1 LINE L1 -107 6044 5234 * 9685 139 30 13 chr5 99180464 99183192 -100446958 + L1MA3 LINE L1 3543 6305 0 24 0 0 0 chr5 99184503 99184527 -100445623 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 99186982 99187006 -100443144 + AT_rich Low_complexity Low_complexity 1 24 0 18904 37 3 0 chr5 99188090 99191184 -100438966 - L1PA3 LINE L1 0 6155 3059 17488 39 1 2 chr5 99191184 99193348 -100436802 + L1PA3 LINE L1 889 3050 -3096 213 323 65 25 chr5 99194111 99194312 -100435838 - L2 LINE L2 -1231 2083 1875 353 297 146 0 chr5 99194471 99194624 -100435526 + MIR SINE MIR 21 202 -60 2093 118 0 3 chr5 99194730 99195017 -100435133 + AluSq SINE Alu 1 286 -27 864 89 0 0 chr5 99195069 99195192 -100434958 + (TC)n Simple_repeat Simple_repeat 1 123 0 304 240 27 0 chr5 99195365 99195440 -100434710 - L2 LINE L2 0 3313 3237 2245 95 0 10 chr5 99196288 99196583 -100433567 + AluSc SINE Alu 4 295 -14 328 85 0 0 chr5 99196665 99196712 -100433438 - L1MB8 LINE L1 -5 6173 6127 5249 181 44 36 chr5 99196713 99198782 -100431368 - L1MB8 LINE L1 -134 6044 3960 271 326 11 0 chr5 99198792 99198881 -100431269 + L2 LINE L2 2946 3035 -237 335 257 115 0 chr5 99199708 99199821 -100430329 - MLT1D LTR MaLR -379 126 1 278 289 15 101 chr5 99200004 99200093 -100430057 + HAL1 LINE L1 1245 1340 -1167 2216 122 0 3 chr5 99200093 99200404 -100429746 + AluSx SINE Alu 1 310 -2 278 289 15 101 chr5 99200404 99200578 -100429572 + HAL1 LINE L1 1340 1475 -1032 2585 201 16 45 chr5 99200578 99201149 -100429001 - MLT2B3 LTR ERVL 0 554 1 278 289 15 101 chr5 99201149 99201220 -100428930 + HAL1 LINE L1 1475 1551 -956 2337 103 3 0 chr5 99201317 99201629 -100428521 + AluSq SINE Alu 1 313 0 529 230 171 7 chr5 99201743 99201895 -100428255 - MER5A DNA MER1_type -3 186 10 400 336 22 15 chr5 99201940 99202077 -100428073 - MER5A DNA MER1_type 0 189 52 4808 165 75 10 chr5 99202176 99202913 -100427237 - L1MA6 LINE L1 -21 6279 5592 2308 110 0 0 chr5 99202913 99203222 -100426928 - AluSx SINE Alu -3 309 1 2182 116 0 10 chr5 99203222 99203524 -100426626 - AluSx SINE Alu -12 300 2 4808 165 75 10 chr5 99203524 99203767 -100426383 - L1MA6 LINE L1 -707 5593 5237 185 233 100 17 chr5 99204419 99204479 -100425671 + L3 LINE CR1 161 225 -1352 1911 143 55 0 chr5 99204484 99204816 -100425334 - MER47A DNA MER2_type -16 350 1 253 192 0 0 chr5 99204928 99204980 -100425170 + L1MC4 LINE L1 6652 6703 -1339 341 275 7 21 chr5 99204980 99204997 -100425153 + (TA)n Simple_repeat Simple_repeat 2 18 -123 1931 170 24 3 chr5 99204997 99205332 -100424818 - MER2 DNA MER2_type -1 343 2 341 275 7 21 chr5 99205332 99205456 -100424694 + (TA)n Simple_repeat Simple_repeat 18 141 0 361 280 115 40 chr5 99205501 99205803 -100424347 - L1MC4a LINE L1 -586 5773 5576 448 268 119 21 chr5 99206617 99206811 -100423339 + MIR SINE MIR 8 220 -42 338 187 5 215 chr5 99208756 99208864 -100421286 + MIR SINE MIR 37 82 -180 1606 162 49 39 chr5 99208864 99209172 -100420978 - AluJo SINE Alu -1 311 1 338 187 5 215 chr5 99209172 99209272 -100420878 + MIR SINE MIR 82 201 -61 21 36 0 0 chr5 99209749 99209777 -100420373 + AT_rich Low_complexity Low_complexity 1 28 0 373 127 99 0 chr5 99211794 99211865 -100418285 + L1MA3 LINE L1 6033 6110 -195 2554 195 36 45 chr5 99213644 99214089 -100416061 - L1ME1 LINE L1 -6 6160 5746 2499 180 56 4 chr5 99214089 99214589 -100415561 - L1MD2 LINE L1 -15 6344 5819 2554 195 36 45 chr5 99214589 99215060 -100415090 - L1ME1 LINE L1 -420 5746 5272 5303 84 55 10 chr5 99215078 99215402 -100414748 - L1MA2 LINE L1 0 6304 5996 2086 127 0 3 chr5 99215402 99215701 -100414449 + AluY SINE Alu 2 299 -12 5303 84 55 10 chr5 99215701 99216187 -100413963 - L1MA2 LINE L1 -308 5996 5457 2290 201 149 128 chr5 99216191 99216977 -100413173 - L1ME1 LINE L1 -1272 4874 4106 660 130 0 9 chr5 99216977 99217085 -100413065 - AluSx SINE Alu -3 309 203 207 0 0 0 chr5 99217086 99217109 -100413041 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2030 116 22 0 chr5 99217109 99217385 -100412765 - AluSg SINE Alu -28 282 1 1494 136 9 0 chr5 99217386 99217599 -100412551 - AluSx SINE Alu -97 215 1 2290 201 149 128 chr5 99217599 99217965 -100412185 - L1ME1 LINE L1 -2040 4106 3577 3554 145 22 75 chr5 99217965 99218695 -100411455 - LTR8 LTR ERV1 0 691 1 2290 201 149 128 chr5 99218695 99218802 -100411348 - L1ME1 LINE L1 -2569 3577 3474 1565 213 44 101 chr5 99218814 99218931 -100411219 - L1MD2 LINE L1 -473 5691 5569 2061 55 0 0 chr5 99218931 99219185 -100410965 - L1PA7 LINE L1 0 6154 5901 1565 213 44 101 chr5 99219185 99220055 -100410095 - L1MD2 LINE L1 -595 5569 4755 1943 95 4 19 chr5 99220055 99220319 -100409831 - AluSg SINE Alu -11 299 40 1565 213 44 101 chr5 99220319 99220396 -100409754 - L1MD2 LINE L1 -1409 4755 4675 4998 204 22 6 chr5 99220420 99221481 -100408669 - Tigger6a DNA MER2_type -4 1079 2 2686 292 83 32 chr5 99221528 99222817 -100407333 - L2 LINE L2 -159 3154 1793 9743 130 150 34 chr5 99222834 99224680 -100405470 - L1PBa LINE L1 -3543 3319 1045 377 132 0 0 chr5 99224680 99224733 -100405417 + AluS SINE Alu 231 283 -19 9743 130 150 34 chr5 99224733 99225065 -100405085 - L1PBa LINE L1 -5817 1045 753 496 362 41 8 chr5 99225071 99225317 -100404833 + L2 LINE L2 1959 2212 -1102 1027 140 149 32 chr5 99225320 99225541 -100404609 + Tigger6 DNA MER2_type 81 327 -1270 240 282 0 0 chr5 99225651 99225722 -100404428 + Tigger3(Golem) DNA MER2_type 1441 1511 -1518 384 253 10 10 chr5 99225800 99225899 -100404251 + MLT2D LTR ERVL 268 366 -48 25 31 0 0 chr5 99225922 99225954 -100404196 + AT_rich Low_complexity Low_complexity 1 32 0 237 161 54 18 chr5 99225954 99226010 -100404140 + MLT2D LTR ERVL 349 406 -8 1352 68 0 0 chr5 99226065 99226227 -100403923 + AluY SINE Alu 130 291 -20 1233 164 78 43 chr5 99226243 99226499 -100403651 - AluJb SINE Alu -12 300 36 2060 133 0 0 chr5 99226572 99226857 -100403293 - AluSx SINE Alu -27 285 1 212 250 156 16 chr5 99226863 99226927 -100403223 + L2 LINE L2 3232 3304 -9 762 250 14 19 chr5 99228309 99228521 -100401629 - MIR SINE MIR 0 262 52 897 235 101 123 chr5 99228525 99229443 -100400707 - HAL1 LINE L1 -832 1675 778 232 224 0 0 chr5 99230372 99230421 -100399729 - L2 LINE L2 -1 3312 3264 37080 54 8 4 chr5 99230649 99236182 -100393968 + L1PA5 LINE L1 607 6153 -1 2456 64 3 0 chr5 99236233 99236529 -100393621 + AluY SINE Alu 1 297 -14 2844 196 27 17 chr5 99236930 99237527 -100392623 - L1P LINE L1 -5507 639 37 299 183 0 0 chr5 99237544 99237604 -100392546 - L1ME LINE L1 -379 5785 5726 488 273 80 21 chr5 99237650 99237837 -100392313 - LTR40a LTR ERVL -321 198 1 304 309 124 88 chr5 99237843 99238319 -100391831 + L2 LINE L2 2394 2886 -428 1458 234 46 37 chr5 99238856 99239310 -100390840 - L1ME1 LINE L1 -5 6161 5704 186 313 0 31 chr5 99240636 99240700 -100389450 + L2 LINE L2 3252 3313 0 213 39 0 0 chr5 99240844 99240870 -100389280 + (GA)n Simple_repeat Simple_repeat 1 26 0 196 400 210 0 chr5 99241125 99241225 -100388925 - L2 LINE L2 -15 3257 3137 27 73 0 0 chr5 99241661 99241716 -100388434 + AT_rich Low_complexity Low_complexity 1 55 0 265 52 0 172 chr5 99244384 99244442 -100385708 + MADE1 DNA Mariner 33 80 0 494 297 94 9 chr5 99244778 99244990 -100385160 - MLT1L LTR MaLR -33 582 353 280 347 94 40 chr5 99245249 99245526 -100384624 + L3b LINE CR1 1245 1536 -47 343 250 22 22 chr5 99245700 99245792 -100384358 - MER5A DNA MER1_type -7 182 91 615 253 30 18 chr5 99245793 99245959 -100384191 - MLT1E2 LTR MaLR -2 624 457 398 205 12 0 chr5 99245959 99246053 -100384097 - L1MEc LINE L1 -1881 4334 4239 273 149 0 0 chr5 99246151 99246198 -100383952 - L1PA12 LINE L1 -2 6166 6120 2909 215 53 17 chr5 99246235 99247109 -100383041 - L1MEc LINE L1 -1938 4277 3373 376 265 97 88 chr5 99247117 99247539 -100382611 + LTR68 LTR ERV1 7 432 -308 3532 230 34 41 chr5 99247707 99248137 -100382013 - L1MEc LINE L1 -2856 3359 2928 2463 73 0 3 chr5 99248137 99248440 -100381710 + AluY SINE Alu 1 302 -9 3532 230 34 41 chr5 99248440 99249046 -100381104 - L1MEc LINE L1 -3287 2928 2319 1964 92 4 4 chr5 99249046 99249308 -100380842 + AluY SINE Alu 39 300 -11 3532 230 34 41 chr5 99249308 99249619 -100380531 - L1MEc LINE L1 -3896 2319 2053 1039 226 28 0 chr5 99249619 99249831 -100380319 + MER20 DNA MER1_type 2 219 0 3532 230 34 41 chr5 99249831 99250142 -100380008 - L1MEc LINE L1 -4162 2053 1741 638 285 12 70 chr5 99250147 99250403 -100379747 - L1MEc LINE L1 -6120 276 36 183 80 0 0 chr5 99250403 99250428 -100379722 + (TA)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr5 99250606 99250629 -100379521 + AT_rich Low_complexity Low_complexity 1 23 0 907 70 86 0 chr5 99251039 99251167 -100378983 - MER85 DNA T2_type 0 139 1 706 241 66 0 chr5 99251324 99251490 -100378660 + MIR SINE MIR 13 189 -73 240 236 0 0 chr5 99251522 99251577 -100378573 + L1MC4 LINE L1 6648 6702 -1340 183 129 0 0 chr5 99251581 99251612 -100378538 + (TATATG)n Simple_repeat Simple_repeat 6 36 0 2085 85 44 0 chr5 99252011 99252283 -100377867 - AluSg SINE Alu -16 294 11 228 338 0 0 chr5 99252482 99252553 -100377597 + L2 LINE L2 2717 2787 -527 2822 108 19 14 chr5 99252744 99253170 -100376980 - MSTA LTR MaLR 0 428 1 210 37 0 0 chr5 99253268 99253295 -100376855 + (TC)n Simple_repeat Simple_repeat 2 28 0 195 398 51 20 chr5 99253810 99253908 -100376242 + L2 LINE L2 3079 3179 -93 23 0 0 0 chr5 99255437 99255460 -100374690 + AT_rich Low_complexity Low_complexity 1 23 0 919 94 94 35 chr5 99255593 99255764 -100374386 + L1PB1 LINE L1 5970 6150 -1 1950 161 0 10 chr5 99256955 99257259 -100372891 + AluJb SINE Alu 1 301 -11 285 29 0 0 chr5 99258269 99258303 -100371847 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 1979 147 3 0 chr5 99258310 99258596 -100371554 - AluJb SINE Alu -25 287 1 1154 214 43 36 chr5 99258635 99258916 -100371234 + MLT2D LTR ERVL 91 373 -41 778 196 8 107 chr5 99259359 99259547 -100370603 + MLT1J LTR MaLR 5 141 -309 640 199 26 33 chr5 99259554 99259705 -100370445 + MLT1J LTR MaLR 288 437 -74 24 32 0 0 chr5 99261473 99261504 -100368646 + AT_rich Low_complexity Low_complexity 1 31 0 1005 231 107 43 chr5 99262233 99262366 -100367784 + MER113 DNA MER1_type? 5 128 -393 2536 57 0 3 chr5 99262366 99262666 -100367484 - AluY SINE Alu -12 299 1 1005 231 107 43 chr5 99262666 99262771 -100367379 + MER113 DNA MER1_type? 128 225 -296 1987 185 6 0 chr5 99262771 99263117 -100367033 + MER7A DNA MER2_type 1 346 0 1005 231 107 43 chr5 99263117 99263362 -100366788 + MER113 DNA MER1_type? 225 520 -1 212 237 17 34 chr5 99263443 99263502 -100366648 - L2 LINE L2 -61 3252 3195 24 32 0 0 chr5 99264007 99264038 -100366112 + AT_rich Low_complexity Low_complexity 1 31 0 279 327 0 0 chr5 99266099 99266209 -100363941 + A-rich Low_complexity Low_complexity 1 110 0 18904 37 3 0 chr5 99266744 99269829 -100360321 - L1PA4 LINE L1 -2 6153 3059 17472 39 1 2 chr5 99269829 99271993 -100358157 + L1PA4 LINE L1 889 3050 -3096 213 323 65 25 chr5 99272756 99272957 -100357193 - L2 LINE L2 -1231 2083 1875 353 297 146 0 chr5 99273116 99273269 -100356881 + MIR SINE MIR 21 202 -60 2093 118 0 3 chr5 99273375 99273662 -100356488 + AluSq SINE Alu 1 286 -27 864 89 0 0 chr5 99273714 99273837 -100356313 + (TC)n Simple_repeat Simple_repeat 1 123 0 304 240 27 0 chr5 99274010 99274085 -100356065 - L2 LINE L2 0 3313 3237 2245 95 0 10 chr5 99274933 99275228 -100354922 + AluSc SINE Alu 4 295 -14 328 85 0 0 chr5 99275310 99275357 -100354793 - L1MB8 LINE L1 -5 6173 6127 5279 181 44 36 chr5 99275358 99277426 -100352724 - L1MB8 LINE L1 -134 6044 3960 271 326 11 0 chr5 99277436 99277525 -100352625 + L2 LINE L2 2946 3035 -237 335 257 115 0 chr5 99278352 99278465 -100351685 - MLT1D LTR MaLR -379 126 1 278 289 15 101 chr5 99278648 99278737 -100351413 + HAL1 LINE L1 1245 1340 -1167 2228 119 0 3 chr5 99278737 99279048 -100351102 + AluSx SINE Alu 1 310 -2 278 289 15 101 chr5 99279048 99279222 -100350928 + HAL1 LINE L1 1340 1475 -1032 2585 201 16 45 chr5 99279222 99279793 -100350357 - MLT2B3 LTR ERVL 0 554 1 278 289 15 101 chr5 99279793 99279864 -100350286 + HAL1 LINE L1 1475 1551 -956 2338 103 3 0 chr5 99279961 99280301 -100349849 + AluSq SINE Alu 1 341 0 529 230 171 7 chr5 99280408 99280560 -100349590 - MER5A DNA MER1_type -3 186 10 400 336 22 15 chr5 99280605 99280742 -100349408 - MER5A DNA MER1_type 0 189 52 4808 165 75 10 chr5 99280841 99281578 -100348572 - L1MA6 LINE L1 -21 6279 5592 2405 94 0 0 chr5 99281578 99281887 -100348263 - AluSx SINE Alu -3 309 1 2182 116 0 10 chr5 99281887 99282189 -100347961 - AluSx SINE Alu -12 300 2 4808 165 75 10 chr5 99282189 99282432 -100347718 - L1MA6 LINE L1 -707 5593 5237 185 233 100 17 chr5 99283084 99283144 -100347006 + L3 LINE CR1 161 225 -1352 1911 143 55 0 chr5 99283149 99283481 -100346669 - MER47A DNA MER2_type -16 350 1 253 192 0 0 chr5 99283593 99283645 -100346505 + L1MC4 LINE L1 6652 6703 -1339 341 275 7 21 chr5 99283645 99283662 -100346488 + (TA)n Simple_repeat Simple_repeat 2 18 -123 1931 170 24 3 chr5 99283662 99283997 -100346153 - MER2 DNA MER2_type -1 343 2 341 275 7 21 chr5 99283997 99284121 -100346029 + (TA)n Simple_repeat Simple_repeat 18 141 0 361 280 115 40 chr5 99284166 99284468 -100345682 - L1MC4a LINE L1 -586 5773 5576 448 268 119 21 chr5 99285282 99285476 -100344674 + MIR SINE MIR 8 220 -42 338 187 5 215 chr5 99287421 99287529 -100342621 + MIR SINE MIR 37 82 -180 1606 162 49 39 chr5 99287529 99287837 -100342313 - AluJo SINE Alu -1 311 1 338 187 5 215 chr5 99287837 99287937 -100342213 + MIR SINE MIR 82 201 -61 21 36 0 0 chr5 99288414 99288442 -100341708 + AT_rich Low_complexity Low_complexity 1 28 0 373 127 99 0 chr5 99290459 99290530 -100339620 + L1MA3 LINE L1 6033 6110 -195 2573 194 36 45 chr5 99292309 99292754 -100337396 - L1ME1 LINE L1 -6 6160 5746 2499 180 56 4 chr5 99292754 99293254 -100336896 - L1MD2 LINE L1 -15 6344 5819 2573 194 36 45 chr5 99293254 99293725 -100336425 - L1ME1 LINE L1 -420 5746 5272 5303 84 55 10 chr5 99293743 99294067 -100336083 - L1MA2 LINE L1 0 6304 5996 2086 127 0 3 chr5 99294067 99294366 -100335784 + AluY SINE Alu 2 299 -12 5303 84 55 10 chr5 99294366 99294852 -100335298 - L1MA2 LINE L1 -308 5996 5457 2290 201 149 128 chr5 99294856 99295642 -100334508 - L1ME1 LINE L1 -1272 4874 4106 660 130 0 9 chr5 99295642 99295750 -100334400 - AluSx SINE Alu -3 309 203 207 0 0 0 chr5 99295751 99295774 -100334376 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2030 116 22 0 chr5 99295774 99296050 -100334100 - AluSg SINE Alu -28 282 1 1494 136 9 0 chr5 99296051 99296264 -100333886 - AluSx SINE Alu -97 215 1 2290 201 149 128 chr5 99296264 99296630 -100333520 - L1ME1 LINE L1 -2040 4106 3577 3554 145 22 75 chr5 99296630 99297360 -100332790 - LTR8 LTR ERV1 0 691 1 2290 201 149 128 chr5 99297360 99297467 -100332683 - L1ME1 LINE L1 -2569 3577 3474 1565 213 44 101 chr5 99297479 99297596 -100332554 - L1MD2 LINE L1 -473 5691 5569 2061 55 0 0 chr5 99297596 99297850 -100332300 - L1PA7 LINE L1 0 6154 5901 1565 213 44 101 chr5 99297850 99298720 -100331430 - L1MD2 LINE L1 -595 5569 4755 1951 98 4 15 chr5 99298720 99298985 -100331165 - AluY SINE Alu -10 301 40 1565 213 44 101 chr5 99298985 99299062 -100331088 - L1MD2 LINE L1 -1409 4755 4675 4998 204 22 6 chr5 99299086 99300147 -100330003 - Tigger6a DNA MER2_type -4 1079 2 2668 291 84 32 chr5 99300194 99301482 -100328668 - L2 LINE L2 -159 3154 1793 9743 130 150 34 chr5 99301499 99303345 -100326805 - L1PBa LINE L1 -3543 3319 1045 377 132 0 0 chr5 99303345 99303398 -100326752 + AluS SINE Alu 230 282 -19 9743 130 150 34 chr5 99303398 99303730 -100326420 - L1PBa LINE L1 -5817 1045 753 496 362 41 8 chr5 99303736 99303982 -100326168 + L2 LINE L2 1959 2212 -1102 1027 140 149 32 chr5 99303985 99304206 -100325944 + Tigger6 DNA MER2_type 81 327 -1270 240 282 0 0 chr5 99304316 99304387 -100325763 + Tigger3(Golem) DNA MER2_type 1441 1511 -1518 384 253 10 10 chr5 99304465 99304564 -100325586 + MLT2D LTR ERVL 268 366 -48 25 31 0 0 chr5 99304587 99304619 -100325531 + AT_rich Low_complexity Low_complexity 1 32 0 237 161 54 18 chr5 99304619 99304675 -100325475 + MLT2D LTR ERVL 349 406 -8 1352 68 0 0 chr5 99304730 99304892 -100325258 + AluY SINE Alu 130 291 -20 1362 144 78 43 chr5 99304908 99305164 -100324986 - AluSx SINE Alu -12 300 36 2081 138 0 0 chr5 99305225 99305522 -100324628 - AluSx SINE Alu -15 297 1 212 250 156 16 chr5 99305528 99305592 -100324558 + L2 LINE L2 3232 3304 -9 754 250 14 19 chr5 99306974 99307186 -100322964 - MIR SINE MIR 0 262 52 906 238 99 122 chr5 99307190 99308109 -100322041 - HAL1 LINE L1 -832 1675 778 232 224 0 0 chr5 99309038 99309087 -100321063 - L2 LINE L2 -1 3312 3264 37091 53 8 4 chr5 99309314 99314848 -100315302 + L1PA5 LINE L1 607 6154 0 2482 63 3 0 chr5 99314900 99315199 -100314951 + AluY SINE Alu 1 300 -11 308 93 0 0 chr5 99316460 99316503 -100313647 + MADE1 DNA Mariner 1 43 -37 653 287 149 37 chr5 99316640 99316988 -100313162 + MLT1J2 LTR MaLR 54 440 -6 575 124 22 195 chr5 99317013 99317239 -100312911 + MER53 DNA DNA 2 188 -1 294 266 75 32 chr5 99317916 99318010 -100312140 - MIR3 SINE MIR -45 163 66 204 245 0 0 chr5 99318510 99318559 -100311591 - L2 LINE L2 -16 3256 3208 27 49 0 0 chr5 99318715 99318756 -100311394 + AT_rich Low_complexity Low_complexity 1 41 0 319 307 115 26 chr5 99319620 99319812 -100310338 + L2 LINE L2 2140 2348 -966 628 197 7 44 chr5 99319896 99320033 -100310117 + MIR SINE MIR 3 134 -128 5900 131 27 7 chr5 99320042 99321239 -100308911 - L1MA7 LINE L1 0 6291 5068 22 35 0 0 chr5 99321241 99321270 -100308880 + AT_rich Low_complexity Low_complexity 1 29 0 301 213 133 0 chr5 99321286 99321361 -100308789 + MIR SINE MIR 178 262 0 338 315 160 33 chr5 99321517 99321971 -100308179 + L2 LINE L2 2583 3083 -189 277 308 136 24 chr5 99322036 99322205 -100307945 - MER5A DNA MER1_type -1 188 1 216 303 22 56 chr5 99322205 99322290 -100307860 + L2 LINE L2 3182 3263 -9 27 29 0 0 chr5 99322801 99322835 -100307315 + AT_rich Low_complexity Low_complexity 1 34 0 1670 130 63 46 chr5 99322837 99323121 -100307029 - AluJb SINE Alu -17 295 7 1185 196 23 0 chr5 99323797 99324016 -100306134 - MER58A DNA MER1_type 0 224 1 189 273 0 0 chr5 99324228 99324272 -100305878 + MIR SINE MIR 86 129 -133 1309 248 96 65 chr5 99325472 99326044 -100304106 - MLT1E LTR MaLR -3 590 1 34 72 0 0 chr5 99326948 99327017 -100303133 + AT_rich Low_complexity Low_complexity 1 69 0 259 341 0 12 chr5 99327278 99327363 -100302787 - MIR3 SINE MIR -14 194 111 1707 153 79 20 chr5 99328353 99328707 -100301443 - THE1C LTR MaLR 0 375 1 2339 129 41 59 chr5 99330257 99330486 -100299664 + Tigger2a DNA MER2_type 1 220 -2488 1816 138 33 0 chr5 99330486 99330614 -100299536 + AluSx SINE Alu 1 123 -189 333 0 0 0 chr5 99330614 99330651 -100299499 + (TA)n Simple_repeat Simple_repeat 1 37 0 1816 138 33 0 chr5 99330651 99330798 -100299352 + AluSx SINE Alu 123 285 -27 2339 129 41 59 chr5 99330798 99331010 -100299140 + Tigger2a DNA MER2_type 220 434 0 871 343 25 8 chr5 99331663 99332062 -100298088 + L1PA16 LINE L1 10 415 -7166 14601 214 23 13 chr5 99332731 99334407 -100295743 + L1PA16 LINE L1 2203 3861 -3743 2184 82 4 4 chr5 99334407 99334724 -100295426 + AluY SINE Alu 1 317 0 14601 214 23 13 chr5 99334724 99338367 -100291783 + L1PA16 LINE L1 3861 7587 -17 26 0 0 0 chr5 99338957 99338983 -100291167 + AT_rich Low_complexity Low_complexity 1 26 0 198 236 0 0 chr5 99340046 99340101 -100290049 + GA-rich Low_complexity Low_complexity 3 57 0 2374 49 3 67 chr5 99340888 99341217 -100288933 - AluY SINE Alu -3 308 1 210 369 135 0 chr5 99341929 99342040 -100288110 - L2 LINE L2 0 3272 3147 221 267 30 50 chr5 99343445 99343546 -100286604 + MIR3 SINE MIR 104 202 -6 553 306 126 5 chr5 99344346 99344568 -100285582 - MIR SINE MIR -11 251 3 560 265 15 0 chr5 99344991 99345134 -100285016 + MIR SINE MIR 45 188 -62 240 300 8 33 chr5 99345226 99345346 -100284804 + CT-rich Low_complexity Low_complexity 3 119 0 2831 83 72 12 chr5 99345959 99346378 -100283772 - MLT2A1 LTR ERVL 0 444 1 333 0 0 0 chr5 99346764 99346801 -100283349 + (T)n Simple_repeat Simple_repeat 1 37 0 22 0 0 0 chr5 99346944 99346966 -100283184 + AT_rich Low_complexity Low_complexity 1 22 0 735 208 181 65 chr5 99347022 99347421 -100282729 + MLT1H LTR MaLR 105 549 0 1569 164 54 48 chr5 99347976 99348115 -100282035 + MER44D DNA MER2_type 2 139 -2352 2066 107 55 3 chr5 99348115 99348404 -100281746 - AluSg SINE Alu -6 304 1 1569 164 54 48 chr5 99348404 99348600 -100281550 + MER44D DNA MER2_type 139 609 0 202 312 67 90 chr5 99348879 99349235 -100280915 - L2 LINE L2 -51 3221 2874 742 267 94 16 chr5 99349652 99349959 -100280191 - MARNA DNA Mariner -217 369 39 618 256 9 57 chr5 99349985 99350196 -100279954 - L2 LINE L2 0 3313 3113 2245 132 52 14 chr5 99350914 99351278 -100278872 + MLT1B LTR MaLR 13 390 0 2475 163 63 51 chr5 99351531 99351833 -100278317 - MLT2B2 LTR ERVL 0 515 203 2164 117 0 3 chr5 99351833 99352131 -100278019 + AluSx SINE Alu 1 297 -15 2475 163 63 51 chr5 99352131 99352337 -100277813 - MLT2B2 LTR ERVL -312 203 1 2931 164 31 43 chr5 99352926 99353547 -100276603 - L1MB8 LINE L1 0 6178 5566 195 384 32 32 chr5 99353658 99353877 -100276273 + L2 LINE L2 2626 2844 -470 576 345 91 19 chr5 99356020 99356382 -100273768 - L2 LINE L2 -1 3312 2925 327 122 0 0 chr5 99357314 99357363 -100272787 - MLT2B1 LTR ERVL 0 520 472 2457 68 0 0 chr5 99357845 99358137 -100272013 + AluY SINE Alu 1 292 -19 14919 171 24 13 chr5 99358516 99360487 -100269663 - L1MA3 LINE L1 0 7724 5775 2446 81 0 0 chr5 99360487 99360795 -100269355 - AluY SINE Alu -3 308 1 14919 171 24 13 chr5 99360795 99361598 -100268552 - L1MA3 LINE L1 -1949 5775 4982 2454 59 0 16 chr5 99361598 99361901 -100268249 - AluY SINE Alu -13 298 1 14919 171 24 13 chr5 99361901 99363546 -100266604 - L1MA3 LINE L1 -2742 4982 3253 6405 94 4 11 chr5 99363546 99363563 -100266587 - L1PA10 LINE L1 -12 6156 6140 405 98 0 0 chr5 99363563 99363624 -100266526 - L1PA10 LINE L1 -2 6166 6106 6405 94 4 11 chr5 99363624 99364376 -100265774 - L1PA10 LINE L1 -28 6140 5392 2206 65 0 4 chr5 99364376 99364651 -100265499 - AluY SINE Alu -5 306 33 6405 94 4 11 chr5 99364651 99364826 -100265324 - L1PA10 LINE L1 -776 5392 5217 3363 139 4 5 chr5 99364832 99365384 -100264766 + L1P LINE L1 4228 4778 -1368 * 18386 155 31 19 chr5 99365380 99368587 -100261563 - L1MA3 LINE L1 -4308 3257 11 376 260 17 28 chr5 99369007 99369184 -100260966 + MER104 DNA MER2_type 5 179 -1 608 266 192 24 chr5 99371182 99371521 -100258629 - MLT1J2 LTR MaLR 0 450 55 23 0 0 0 chr5 99372851 99372874 -100257276 + AT_rich Low_complexity Low_complexity 1 23 0 1009 34 0 0 chr5 99373819 99373937 -100256213 + L1PA10 LINE L1 6041 6158 -10 21 71 0 0 chr5 99374316 99374358 -100255792 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr5 99374600 99374635 -100255515 + AT_rich Low_complexity Low_complexity 1 35 0 348 242 42 50 chr5 99375044 99375164 -100254986 + L2 LINE L2 3187 3305 -8 700 268 66 71 chr5 99375188 99375580 -100254570 - MLT1K LTR MaLR -3 585 196 308 157 20 0 chr5 99376588 99376639 -100253511 + MIR SINE MIR 32 83 -179 389 327 62 31 chr5 99378231 99378457 -100251693 + L2 LINE L2 2745 2977 -337 23 33 0 0 chr5 99378459 99378489 -100251661 + AT_rich Low_complexity Low_complexity 1 30 0 38 0 0 0 chr5 99378646 99378684 -100251466 + AT_rich Low_complexity Low_complexity 1 38 0 539 296 73 0 chr5 99378685 99378882 -100251268 - MIR SINE MIR 0 262 54 181 286 0 0 chr5 99379261 99379303 -100250847 - L2 LINE L2 -28 3244 3203 1508 250 117 0 chr5 99379307 99379743 -100250407 - MLT1H LTR MaLR 0 549 63 202 323 16 0 chr5 99379804 99379866 -100250284 - L2 LINE L2 -71 3201 3139 23 0 0 0 chr5 99380549 99380572 -100249578 + AT_rich Low_complexity Low_complexity 1 23 0 416 242 42 0 chr5 99380771 99380866 -100249284 - L1MC4 LINE L1 -1146 6896 6798 307 202 16 81 chr5 99381170 99381294 -100248856 - L1M4 LINE L1 -849 5297 5182 9076 28 0 0 chr5 99381506 99383356 -100246794 - L1PA3 LINE L1 -1 6154 4305 22 56 0 0 chr5 99383645 99383681 -100246469 + AT_rich Low_complexity Low_complexity 1 36 0 527 311 190 43 chr5 99383917 99384636 -100245514 + L2 LINE L2 2405 3232 -81 27 49 0 0 chr5 99384657 99384698 -100245452 + AT_rich Low_complexity Low_complexity 1 41 0 2811 19 0 0 chr5 99386469 99386780 -100243370 + AluY SINE Alu 1 311 0 1751 241 128 26 chr5 99387599 99388131 -100242019 - MLT1G1 LTR MaLR -3 592 7 248 289 105 95 chr5 99388156 99388471 -100241679 - MLT1G1-int LTR MaLR -25 1346 1029 196 106 85 0 chr5 99389065 99389112 -100241038 + CT-rich Low_complexity Low_complexity 1 51 0 1659 94 3 77 chr5 99389116 99389413 -100240737 - L1MA5 LINE L1 -2 6298 6024 485 311 14 63 chr5 99389503 99389853 -100240297 - MLT1G1-int LTR MaLR -794 577 245 1221 224 62 55 chr5 99389946 99390453 -100239697 - MLT1G LTR MaLR 0 549 1 326 47 0 0 chr5 99390814 99390857 -100239293 + MADE1 DNA Mariner 1 43 -37 268 388 0 0 chr5 99391598 99391683 -100238467 - MIR SINE MIR -176 86 2 944 277 21 4 chr5 99392870 99393112 -100237038 + MIR SINE MIR 10 255 -7 545 243 61 44 chr5 99393172 99393353 -100236797 + MIR SINE MIR 51 234 -28 459 275 61 81 chr5 99394203 99394450 -100235700 + MER102b DNA MER1_type 96 337 -4 189 0 0 0 chr5 99395420 99395441 -100234709 + (CAT)n Simple_repeat Simple_repeat 3 23 0 772 275 102 54 chr5 99395701 99396421 -100233729 + L1ME1 LINE L1 5114 5925 -241 205 200 20 20 chr5 99397307 99397357 -100232793 + CT-rich Low_complexity Low_complexity 2 51 0 30 0 0 0 chr5 99397526 99397556 -100232594 + AT_rich Low_complexity Low_complexity 1 30 0 249 308 42 0 chr5 99397883 99398003 -100232147 - L1ME LINE L1 -361 5809 5685 416 298 60 79 chr5 99398028 99398343 -100231807 - MLT1K LTR MaLR -109 479 171 25 51 0 0 chr5 99398633 99398672 -100231478 + AT_rich Low_complexity Low_complexity 1 39 0 404 258 83 108 chr5 99398708 99398948 -100231202 - L2 LINE L2 -86 3227 2994 1150 197 102 3 chr5 99398962 99399257 -100230893 + MER33 DNA MER1_type 1 324 0 206 32 32 0 chr5 99400626 99400657 -100229493 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 42 0 0 0 chr5 99402038 99402080 -100228070 + AT_rich Low_complexity Low_complexity 1 42 0 477 286 43 70 chr5 99402914 99403099 -100227051 - MIR SINE MIR -79 183 4 375 23 0 0 chr5 99403725 99403769 -100226381 + (TGGA)n Simple_repeat Simple_repeat 3 46 0 2494 58 0 0 chr5 99404020 99404314 -100225836 + AluY SINE Alu 1 294 -17 1499 130 133 32 chr5 99405497 99405805 -100224345 + MER44D DNA MER2_type 1 609 0 260 211 39 0 chr5 99406470 99406522 -100223628 - L2 LINE L2 -259 3054 3001 443 336 0 8 chr5 99406700 99406834 -100223316 - MIR3 SINE MIR -11 197 65 351 297 6 73 chr5 99407533 99407988 -100222162 - MER5A DNA MER1_type -1 188 35 2276 72 0 17 chr5 99407656 99407947 -100222203 - AluSg SINE Alu -10 300 15 258 301 13 83 chr5 99407947 99408005 -100222145 + MER5A DNA MER1_type 122 183 -6 2266 59 0 0 chr5 99408780 99409051 -100221099 + AluY SINE Alu 34 304 -7 316 317 63 28 chr5 99409051 99409189 -100220961 + MIR3 SINE MIR 8 145 -63 288 0 0 0 chr5 99409678 99409710 -100220440 + (CA)n Simple_repeat Simple_repeat 1 32 0 260 211 39 0 chr5 99410319 99410371 -100219779 - L2 LINE L2 -259 3054 3001 219 235 59 0 chr5 99410406 99410457 -100219693 + MIR SINE MIR 175 228 -34 2323 86 0 17 chr5 99411789 99412091 -100218059 + AluY SINE Alu 1 297 -14 217 89 44 0 chr5 99413465 99413510 -100216640 + CT-rich Low_complexity Low_complexity 1 47 0 1542 132 52 46 chr5 99413797 99414122 -100216028 + L1MA7 LINE L1 5958 6284 -7 34 24 0 0 chr5 99414154 99414195 -100215955 + AT_rich Low_complexity Low_complexity 1 41 0 1954 133 30 3 chr5 99414359 99414697 -100215453 - L1MA6 LINE L1 0 6300 5954 1720 165 7 7 chr5 99414697 99414976 -100215174 + MER1B DNA MER1_type 2 280 -59 4221 148 26 4 chr5 99414986 99416018 -100214132 - L1MA6 LINE L1 -344 5956 4903 1145 278 51 16 chr5 99416046 99416535 -100213615 - L1M4 LINE L1 -2008 4138 3633 30 0 0 0 chr5 99416625 99416655 -100213495 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr5 99417945 99417976 -100212174 + AT_rich Low_complexity Low_complexity 1 31 0 1219 173 0 10 chr5 99417976 99418184 -100211966 + AluJb SINE Alu 83 288 -24 2054 132 3 3 chr5 99418676 99418986 -100211164 + AluJo SINE Alu 3 312 0 559 295 75 21 chr5 99419804 99420045 -100210105 + MIR SINE MIR 7 260 -2 2776 10 0 0 chr5 99420057 99420361 -100209789 + AluYa5 SINE Alu 1 304 -7 1591 174 35 0 chr5 99420683 99420965 -100209185 - Tigger3(Golem) DNA MER2_type -2737 292 1 269 230 14 14 chr5 99421371 99421445 -100208705 - MER31-int LTR ERV1 -1207 3729 3656 1442 223 3 0 chr5 99422106 99422393 -100207757 - LTR51 LTR ERV1 -157 514 227 553 178 10 0 chr5 99423246 99423347 -100206803 + L1MC1 LINE L1 6119 6220 -113 408 219 45 45 chr5 99423354 99423509 -100206641 - MER39 LTR ERV1 -3 704 550 961 219 76 21 chr5 99423525 99423763 -100206387 - LTR48 LTR ERV1 -404 383 133 557 207 18 0 chr5 99423818 99423929 -100206221 + L1MC1 LINE L1 6208 6320 -13 1857 145 62 3 chr5 99424243 99424567 -100205583 - MER2 DNA MER2_type 0 344 2 23 33 0 0 chr5 99424989 99425019 -100205131 + AT_rich Low_complexity Low_complexity 1 30 0 800 172 0 0 chr5 99425664 99425786 -100204364 + MER5A DNA MER1_type 66 187 -2 2260 145 34 28 chr5 99425823 99426370 -100203780 - MLT2A2 LTR ERVL -1 553 1 246 282 14 0 chr5 99427178 99427249 -100202901 + LTR68 LTR ERV1 1 72 -668 236 269 46 56 chr5 99427253 99427361 -100202789 - LTR40b LTR ERVL -153 309 203 476 273 108 47 chr5 99428097 99428511 -100201639 - LTR16C LTR ERVL -2 489 1 307 290 60 0 chr5 99428557 99428657 -100201493 + MIR SINE MIR 137 242 -20 279 93 0 0 chr5 99428670 99428713 -100201437 + (CAT)n Simple_repeat Simple_repeat 3 45 0 2333 84 0 7 chr5 99429087 99429386 -100200764 - AluSq SINE Alu -2 311 15 1455 215 207 7 chr5 99430227 99430656 -100199494 + MLT1E1 LTR MaLR 1 514 -140 3131 237 46 11 chr5 99430683 99431448 -100198702 - MER21B LTR ERV1 -53 810 19 498 224 0 0 chr5 99431455 99431540 -100198610 - MER21B LTR ERV1 -767 96 12 518 165 31 6 chr5 99431563 99431670 -100198480 + MLT1E LTR MaLR 436 590 -3 831 137 0 0 chr5 99431766 99431883 -100198267 + FLAM_C SINE Alu 6 122 -21 23 33 0 0 chr5 99431883 99431913 -100198237 + AT_rich Low_complexity Low_complexity 1 30 0 2090 125 46 27 chr5 99431925 99432293 -100197857 + THE1C LTR MaLR 1 375 0 180 0 0 0 chr5 99432375 99432395 -100197755 + (A)n Simple_repeat Simple_repeat 1 20 0 356 272 0 0 chr5 99433746 99433827 -100196323 + MIR SINE MIR 166 246 -16 1160 227 123 7 chr5 99433827 99434135 -100196015 - MER2 DNA MER2_type 0 344 1 2167 124 0 3 chr5 99434181 99434487 -100195663 + AluSx SINE Alu 1 305 -7 276 290 123 75 chr5 99436721 99437014 -100193136 + L3 LINE CR1 1097 1403 -174 378 271 41 8 chr5 99437055 99437177 -100192973 + MLT1J LTR MaLR 3 128 -383 321 118 0 0 chr5 99437293 99437344 -100192806 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 665 226 0 0 chr5 99437345 99437460 -100192690 - FLAM_C SINE Alu -18 115 1 1798 241 91 24 chr5 99437623 99438070 -100192080 - MLT1E2 LTR MaLR -2 624 134 1953 127 17 7 chr5 99438070 99438369 -100191781 - AluSx SINE Alu 0 312 11 1798 241 91 24 chr5 99438369 99438457 -100191693 - MLT1E2 LTR MaLR -492 134 53 898 275 0 3 chr5 99438664 99438991 -100191159 + AluYa5 SINE Alu 1 326 0 264 59 0 0 chr5 99439425 99439459 -100190691 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 1850 112 0 8 chr5 99439459 99439710 -100190440 - AluSx SINE Alu -63 249 1 189 147 0 0 chr5 99440659 99440693 -100189457 + (TTCTC)n Simple_repeat Simple_repeat 2 35 0 3230 141 22 7 chr5 99440819 99441366 -100188784 - L1PA16 LINE L1 -3 6163 5609 204 259 115 50 chr5 99441833 99441985 -100188165 - MIR SINE MIR -71 191 37 216 167 0 0 chr5 99443501 99443537 -100186613 + (TG)n Simple_repeat Simple_repeat 2 37 0 560 333 46 17 chr5 99444499 99444736 -100185414 - MIR SINE MIR -5 257 14 597 253 236 6 chr5 99444802 99444984 -100185166 + MIR SINE MIR 37 260 -2 1624 121 11 45 chr5 99445334 99445598 -100184552 + AluSx SINE Alu 46 300 -12 184 313 0 21 chr5 99446146 99446194 -100183956 + MIR SINE MIR 56 102 -106 222 290 48 0 chr5 99446872 99446934 -100183216 + MER5A DNA MER1_type 116 180 -9 243 111 0 0 chr5 99447930 99447966 -100182184 - MER53 DNA DNA -1 188 153 317 260 106 41 chr5 99448028 99448151 -100181999 - MER5A DNA MER1_type -56 133 3 2232 113 23 0 chr5 99448349 99448695 -100181455 - L1PA15 LINE L1 0 6165 5812 22 0 0 0 chr5 99448744 99448766 -100181384 + AT_rich Low_complexity Low_complexity 1 22 0 1961 210 80 16 chr5 99449242 99449681 -100180469 - MLT1C LTR MaLR 0 467 1 505 156 21 130 chr5 99449996 99450188 -100179962 + MER53 DNA DNA 8 178 -11 380 297 59 8 chr5 99453319 99453437 -100176713 - L2 LINE L2 -2 3311 3188 215 289 0 0 chr5 99453558 99453603 -100176547 - L2 LINE L2 -95 3177 3133 853 271 45 4 chr5 99454328 99454575 -100175575 - MIR SINE MIR -5 257 1 1058 303 152 32 chr5 99454938 99455860 -100174290 - L2 LINE L2 -2 3311 2291 663 289 74 58 chr5 99457239 99457672 -100172478 + L1MC4a LINE L1 5474 5913 -1895 240 86 0 0 chr5 99459051 99459086 -100171064 + (T)n Simple_repeat Simple_repeat 1 35 0 417 320 70 6 chr5 99459086 99459242 -100170908 + MIR SINE MIR 18 183 -79 793 301 93 27 chr5 99459297 99459736 -100170414 - MLT1K LTR MaLR -16 572 105 1997 141 0 22 chr5 99459934 99460246 -100169904 - AluSx SINE Alu -7 305 1 231 36 0 0 chr5 99460493 99460521 -100169629 + (T)n Simple_repeat Simple_repeat 1 28 0 417 259 9 9 chr5 99461265 99461373 -100168777 - MIR SINE MIR -48 214 107 301 357 26 19 chr5 99461424 99461578 -100168572 - MIR3 SINE MIR -23 185 31 185 194 0 0 chr5 99461708 99461739 -100168411 + MIR SINE MIR 119 149 -59 1297 168 57 24 chr5 99461792 99462089 -100168061 - L1MC3 LINE L1 -541 7244 6938 1980 134 13 13 chr5 99462509 99462816 -100167334 - AluSq SINE Alu -6 307 1 350 254 142 40 chr5 99462844 99463119 -100167031 - L1ME4a LINE L1 -11 6110 5808 21 0 0 0 chr5 99464661 99464682 -100165468 + AT_rich Low_complexity Low_complexity 1 21 0 13685 227 41 11 chr5 99464685 99470242 -100159908 - L1PA16 LINE L1 -27 6196 395 216 313 17 61 chr5 99471015 99471130 -100159020 - MIR SINE MIR -63 145 36 2150 89 14 0 chr5 99471229 99471520 -100158630 - AluSg SINE Alu -15 295 1 574 219 23 16 chr5 99472130 99472258 -100157892 - MER94 DNA DNA -5 129 1 419 277 69 102 chr5 99473666 99473771 -100156379 - ERVL LTR ERVL -607 5157 5050 2862 108 36 6 chr5 99473771 99474245 -100155905 + L1MA3 LINE L1 5818 6305 0 419 277 69 102 chr5 99474245 99474442 -100155708 - ERVL LTR ERVL -714 5050 4865 281 181 0 133 chr5 99474559 99474642 -100155508 - MER5B DNA MER1_type -9 169 98 3498 214 35 0 chr5 99475020 99475721 -100154429 - L1 LINE L1 -1193 4953 4166 270 0 0 0 chr5 99475721 99475751 -100154399 + (TG)n Simple_repeat Simple_repeat 2 31 0 3498 214 35 0 chr5 99475751 99476087 -100154063 - L1 LINE L1 -1980 4166 3843 1636 194 6 6 chr5 99476101 99476436 -100153714 + L1 LINE L1 4954 5288 -858 503 298 35 6 chr5 99477584 99477755 -100152395 + MER117 DNA MER1_type 16 191 -6 483 57 143 0 chr5 99478145 99478215 -100151935 - MADE1 DNA Mariner 0 80 1 233 308 122 37 chr5 99478488 99479062 -100151088 + L1MC/D LINE L1 4012 4634 -1512 316 116 0 0 chr5 99479062 99479105 -100151045 - MIR SINE MIR -5 257 215 651 233 102 11 chr5 99479150 99479326 -100150824 - MIR SINE MIR -35 227 36 471 319 167 36 chr5 99479363 99480005 -100150145 + L1MC/D LINE L1 4658 5383 -763 289 266 32 9 chr5 99480682 99480804 -100149346 + L1MC/D LINE L1 5470 5590 -531 232 188 31 16 chr5 99480857 99480921 -100149229 + L1MC/D LINE L1 5731 5795 -2013 1431 193 65 12 chr5 99480949 99481270 -100148880 + L1MA9 LINE L1 5972 6309 -3 22 35 0 0 chr5 99482067 99482096 -100148054 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 99482399 99482427 -100147723 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr5 99482876 99482903 -100147247 + AT_rich Low_complexity Low_complexity 1 27 0 783 169 8 0 chr5 99484086 99484216 -100145934 + FLAM_C SINE Alu 3 133 -10 1514 258 18 31 chr5 99484539 99485151 -100144999 + L1MC4a LINE L1 5674 6326 -1482 14751 111 18 62 chr5 99485153 99486118 -100144032 - Tigger1 DNA MER2_type 0 2418 1412 1435 211 20 10 chr5 99486118 99486421 -100143729 - AluJo SINE Alu -6 306 1 14751 111 18 62 chr5 99486421 99487981 -100142169 - Tigger1 DNA MER2_type -1006 1412 4 3840 191 71 59 chr5 99487998 99488594 -100141556 + L1MC4a LINE L1 6340 6956 -852 1853 156 140 8 chr5 99488594 99488972 -100141178 - MSTA LTR MaLR 0 428 1 3840 191 71 59 chr5 99488972 99489460 -100140690 + L1MC4a LINE L1 6956 7437 -371 369 323 124 25 chr5 99489466 99489748 -100140402 + Charlie8 DNA MER1_type 181 490 -1927 191 363 102 19 chr5 99489983 99490198 -100139952 - L2 LINE L2 -644 2670 2438 292 271 8 68 chr5 99490596 99490714 -100139436 + MIR SINE MIR 8 118 -144 512 163 66 133 chr5 99490726 99490922 -100139228 + MER53 DNA DNA 7 189 0 342 239 88 33 chr5 99491159 99491296 -100138854 - MLT1C LTR MaLR 0 467 248 540 95 0 0 chr5 99491296 99491380 -100138770 + (TC)n Simple_repeat Simple_repeat 1 84 0 692 210 8 0 chr5 99491389 99491513 -100138637 - FRAM SINE Alu -48 128 4 1048 186 82 57 chr5 99491517 99491834 -100138316 - MLT1C LTR MaLR -142 325 1 236 330 97 22 chr5 99492109 99492336 -100137814 - MER41B LTR ERV1 -234 401 158 236 316 21 11 chr5 99492985 99493080 -100137070 - L1MEd LINE L1 -5895 224 129 2459 82 65 11 chr5 99493095 99493451 -100136699 + THE1C LTR MaLR 1 375 0 441 208 10 20 chr5 99493452 99493553 -100136597 - MER94 DNA DNA -8 126 27 210 222 0 0 chr5 99494021 99494075 -100136075 + (CATATA)n Simple_repeat Simple_repeat 2 55 0 293 185 22 43 chr5 99494075 99494167 -100135983 + L1MC4 LINE L1 6614 6703 -1339 2188 134 64 13 chr5 99494192 99494565 -100135585 + MER6A DNA MER2_type 2 393 -212 1719 155 137 41 chr5 99494565 99494953 -100135197 - MSTA LTR MaLR 0 428 4 8998 180 27 2 chr5 99494962 99496568 -100133582 - MSTA-int LTR MaLR -5 1646 1 978 140 112 17 chr5 99496568 99496746 -100133404 - MSTA LTR MaLR 0 428 234 1809 157 14 0 chr5 99496878 99497171 -100132979 - Tigger3(Golem) DNA MER2_type -3 3026 2730 2092 106 70 25 chr5 99497171 99497530 -100132620 - THE1C LTR MaLR 0 375 1 10061 105 32 44 chr5 99497530 99499129 -100131021 - THE1C-int LTR MaLR 0 1580 1 1820 153 70 25 chr5 99499129 99499488 -100130662 - THE1C LTR MaLR 0 375 1 * 2945 122 83 6 chr5 99499488 99500011 -100130139 - Tigger3(Golem) DNA MER2_type -293 2736 2172 201 154 0 26 chr5 99700585 99700624 -99929526 + CT-rich Low_complexity Low_complexity 2 39 0 356 317 29 0 chr5 99702924 99703028 -99927122 - MIR SINE MIR -2 260 154 448 305 50 58 chr5 99703225 99703374 -99926776 - MLT1L LTR MaLR -356 259 111 7741 26 16 0 chr5 99703374 99704375 -99925775 - L1PA3 LINE L1 -1 6154 5150 448 305 50 58 chr5 99704375 99704484 -99925666 - MLT1L LTR MaLR -504 111 3 392 295 60 18 chr5 99704652 99704818 -99925332 - MIR SINE MIR -69 193 21 201 268 0 0 chr5 99704872 99704913 -99925237 - MIR3 SINE MIR -27 181 141 320 277 173 79 chr5 99705550 99705752 -99924398 + L1MC4a LINE L1 5716 5936 -1872 301 224 8 149 chr5 99707615 99707749 -99922401 + L1MC/D LINE L1 5678 5792 -2016 1730 62 9 0 chr5 99708810 99709035 -99921115 - AluSc SINE Alu -9 300 74 209 244 58 0 chr5 99709436 99709522 -99920628 + (TA)n Simple_repeat Simple_repeat 2 92 0 198 71 0 0 chr5 99709882 99709910 -99920240 + (GA)n Simple_repeat Simple_repeat 1 28 0 198 71 0 0 chr5 99710564 99710592 -99919558 + (GA)n Simple_repeat Simple_repeat 1 28 0 2126 127 0 13 chr5 99711873 99712189 -99917961 + AluSx SINE Alu 1 312 0 391 232 42 0 chr5 99714153 99714248 -99915902 + MER5B DNA MER1_type 6 104 -74 2112 89 34 0 chr5 99715238 99715531 -99914619 - AluSc SINE Alu -6 303 1 265 224 13 26 chr5 99716143 99716219 -99913931 - L1ME LINE L1 -299 5822 5748 463 318 61 20 chr5 99718035 99718280 -99911870 + MIR SINE MIR 2 256 -6 270 0 0 0 chr5 99718622 99718652 -99911498 + (A)n Simple_repeat Simple_repeat 1 30 0 617 284 71 9 chr5 99719236 99719461 -99910689 + MLT1K LTR MaLR 323 561 -27 1906 137 51 43 chr5 99720118 99720490 -99909660 - THE1C LTR MaLR 0 375 1 283 211 99 0 chr5 99720539 99720610 -99909540 + MIR3 SINE MIR 83 160 -48 2052 110 0 0 chr5 99720794 99721084 -99909066 + AluSx SINE Alu 1 290 -22 465 339 56 15 chr5 99722533 99722875 -99907275 + MARNA DNA Mariner 3 358 -228 24 53 0 0 chr5 99723384 99723422 -99906728 + AT_rich Low_complexity Low_complexity 1 38 0 492 250 178 20 chr5 99723470 99723622 -99906528 + MIR SINE MIR 8 183 -79 1983 135 0 0 chr5 99724021 99724317 -99905833 - AluSx SINE Alu -16 296 1 258 105 0 0 chr5 99724373 99724411 -99905739 + (TCCA)n Simple_repeat Simple_repeat 2 39 0 314 289 22 22 chr5 99724446 99724536 -99905614 + MIR SINE MIR 172 261 -1 27 62 0 0 chr5 99724799 99724847 -99905303 + AT_rich Low_complexity Low_complexity 1 48 0 2029 125 10 0 chr5 99724884 99725180 -99904970 - AluSx SINE Alu -13 299 1 7095 107 141 122 chr5 99725792 99727455 -99902695 + pTR5 LTR ERV1 743 2438 0 912 109 36 0 chr5 99728008 99728145 -99902005 - AluSg/x SINE Alu -14 295 154 450 286 77 108 chr5 99728259 99728780 -99901370 - LTR67 LTR ERVL -51 506 2 282 116 0 0 chr5 99728851 99728894 -99901256 + (TCCA)n Simple_repeat Simple_repeat 4 46 0 266 215 103 93 chr5 99728894 99728914 -99901236 - L2 LINE L2 -12 3260 3242 1517 230 104 46 chr5 99728914 99729435 -99900715 - MLT1H1 LTR MaLR 0 555 5 266 215 103 93 chr5 99729435 99729521 -99900629 - L2 LINE L2 -30 3242 3153 2360 70 0 3 chr5 99729780 99730082 -99900068 - AluY SINE Alu -10 301 1 1308 167 29 58 chr5 99730677 99730989 -99899161 - L1MC2 LINE L1 -1 6343 6041 213 39 0 0 chr5 99731837 99731863 -99898287 + (T)n Simple_repeat Simple_repeat 1 26 0 196 281 61 12 chr5 99732055 99732137 -99898013 - MIR SINE MIR -162 100 15 720 258 10 38 chr5 99732544 99732753 -99897397 + MIR SINE MIR 60 262 0 2219 96 30 0 chr5 99735457 99735760 -99894390 + AluSq SINE Alu 1 312 -1 202 114 29 0 chr5 99735773 99735808 -99894342 + (TG)n Simple_repeat Simple_repeat 1 36 0 197 332 53 30 chr5 99735982 99736110 -99894040 - MIR SINE MIR -64 144 23 320 198 0 12 chr5 99738791 99738872 -99891278 + (TA)n Simple_repeat Simple_repeat 2 81 0 201 213 21 0 chr5 99740615 99740662 -99889488 + (TA)n Simple_repeat Simple_repeat 2 49 0 2076 116 0 3 chr5 99740910 99741213 -99888937 - AluSq SINE Alu -11 302 1 1448 201 135 27 chr5 99742273 99742575 -99887575 - Charlie4a DNA MER1_type -1478 483 123 2117 173 25 52 chr5 99742575 99742774 -99887376 + MSTB1 LTR MaLR 1 204 -228 2087 94 17 7 chr5 99742774 99743062 -99887088 + AluSq SINE Alu 1 291 -22 2117 173 25 52 chr5 99743062 99743306 -99886844 + MSTB1 LTR MaLR 204 432 0 1448 201 135 27 chr5 99743306 99743417 -99886733 - Charlie4a DNA MER1_type -1838 123 25 622 126 151 34 chr5 99743857 99743960 -99886190 + FLAM_C SINE Alu 1 90 -212 225 0 0 0 chr5 99743960 99743985 -99886165 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1744 126 81 7 chr5 99743986 99744271 -99885879 + AluSx SINE Alu 5 310 -2 622 126 151 34 chr5 99744271 99744284 -99885866 + FLAM_C SINE Alu 89 133 -169 191 152 22 0 chr5 99744773 99744819 -99885331 + (TA)n Simple_repeat Simple_repeat 2 48 0 1883 149 7 0 chr5 99746297 99746593 -99883557 - AluSx SINE Alu -14 298 1 287 268 106 70 chr5 99746699 99746841 -99883309 - MIR SINE MIR -6 256 110 846 164 89 0 chr5 99747258 99747404 -99882746 + FRAM SINE Alu 16 174 -2 296 111 0 74 chr5 99747845 99747926 -99882224 + (TTTCC)n Simple_repeat Simple_repeat 1 75 0 1953 134 13 0 chr5 99747938 99748236 -99881914 - AluSx SINE Alu -10 302 1 832 227 91 54 chr5 99748391 99748633 -99881517 + MIR SINE MIR 7 257 -5 434 237 85 8 chr5 99748687 99748805 -99881345 + L2 LINE L2 3187 3313 0 1692 185 104 53 chr5 99749152 99749546 -99880604 + MLT1F1 LTR MaLR 144 557 -10 21 0 0 0 chr5 99750165 99750186 -99879964 + AT_rich Low_complexity Low_complexity 1 21 0 2204 91 7 7 chr5 99750312 99750609 -99879541 + AluSx SINE Alu 1 297 -15 2239 94 3 3 chr5 99750858 99751155 -99878995 + AluY SINE Alu 1 297 -14 601 243 8 39 chr5 99751271 99751447 -99878703 - MER5B DNA MER1_type -3 175 15 337 292 21 56 chr5 99751445 99751589 -99878561 + MER5A DNA MER1_type 28 166 -23 * 812 203 6 19 chr5 99751462 99751620 -99878530 - MER5A DNA MER1_type -28 161 6 2083 127 0 0 chr5 99752217 99752517 -99877633 - AluSx SINE Alu -12 300 1 2507 49 0 7 chr5 99752663 99752969 -99877181 + AluY SINE Alu 1 304 -7 212 263 40 40 chr5 99753923 99753999 -99876151 + L2 LINE L2 3221 3296 -17 209 331 39 39 chr5 99755149 99755279 -99874871 - MIR SINE MIR -112 150 21 2294 80 0 46 chr5 99756041 99756366 -99873784 + AluSg SINE Alu 1 310 0 351 262 192 5 chr5 99756593 99756807 -99873343 - MIR SINE MIR 0 262 9 2036 158 107 20 chr5 99757150 99757406 -99872744 - MSTB LTR MaLR 0 426 123 198 0 0 0 chr5 99757406 99757428 -99872722 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 2036 158 107 20 chr5 99757428 99757563 -99872587 - MSTB LTR MaLR -303 123 1 628 330 43 66 chr5 99757734 99758176 -99871974 - L2 LINE L2 0 3272 2841 627 236 236 5 chr5 99759510 99759722 -99870428 + MIR SINE MIR 2 262 0 376 263 11 21 chr5 99761563 99761658 -99868492 - MER5A DNA MER1_type 0 189 96 651 238 95 19 chr5 99764043 99764253 -99865897 + L1MC/D LINE L1 5529 5754 -2054 276 255 248 0 chr5 99764426 99764567 -99865583 + MER104 DNA Tc2 5 180 0 524 221 131 14 chr5 99764752 99764897 -99865253 - MIR SINE MIR -27 235 74 2248 111 0 0 chr5 99766969 99767266 -99862884 - AluSx SINE Alu -15 297 1 2410 63 0 3 chr5 99768205 99768504 -99861646 - AluY SINE Alu -13 298 1 2013 88 44 7 chr5 99768800 99769073 -99861077 + AluSq SINE Alu 14 296 -17 224 159 58 0 chr5 99773775 99773844 -99856306 + A-rich Low_complexity Low_complexity 4 76 0 469 281 59 49 chr5 99775304 99775507 -99854643 + MIR3 SINE MIR 1 205 -3 1784 134 38 3 chr5 99776227 99776540 -99853610 - MER44D DNA MER2_type 0 605 227 392 178 0 0 chr5 99776552 99776625 -99853525 + Tigger7 DNA MER2_type 254 326 -2161 * 1388 194 28 0 chr5 99776623 99776871 -99853279 - Tigger7 DNA MER2_type -478 255 1 1892 156 10 29 chr5 99777587 99777901 -99852249 - AluJb SINE Alu 0 312 5 1132 286 43 54 chr5 99777932 99778028 -99852122 + L2 LINE L2 1963 2059 -1255 2263 97 3 38 chr5 99778028 99778348 -99851802 - AluSg SINE Alu -1 309 1 1132 286 43 54 chr5 99778348 99778811 -99851339 + L2 LINE L2 2059 2516 -798 443 229 115 0 chr5 99779004 99779126 -99851024 + L2 LINE L2 3178 3313 0 364 265 10 0 chr5 99779681 99779783 -99850367 + MIR SINE MIR 160 262 0 531 272 68 12 chr5 99779807 99779969 -99850181 - MER5B DNA MER1_type 0 178 8 204 111 0 0 chr5 99780075 99780111 -99850039 + (TA)n Simple_repeat Simple_repeat 1 36 0 180 0 0 0 chr5 99782097 99782117 -99848033 + (TA)n Simple_repeat Simple_repeat 2 21 0 204 40 0 0 chr5 99782163 99782188 -99847962 + (CCAA)n Simple_repeat Simple_repeat 2 26 0 308 282 127 0 chr5 99783032 99783142 -99847008 - MIR SINE MIR -22 240 117 214 271 21 0 chr5 99783288 99783336 -99846814 + L2 LINE L2 3151 3199 -73 255 255 78 69 chr5 99784929 99785031 -99845119 - MIR3 SINE MIR -11 197 95 423 254 40 16 chr5 99785777 99785903 -99844247 + MIR SINE MIR 134 262 0 2269 83 0 33 chr5 99786164 99786466 -99843684 - AluSc SINE Alu -17 292 1 464 265 88 19 chr5 99786508 99786723 -99843427 + L3b LINE CR1 1107 1336 -247 31 0 0 0 chr5 99789186 99789217 -99840933 + AT_rich Low_complexity Low_complexity 1 31 0 1856 159 30 0 chr5 99789392 99789687 -99840463 + AluJb SINE Alu 1 304 -8 2358 80 3 0 chr5 99789933 99790220 -99839930 - AluSc SINE Alu -21 288 1 423 326 205 35 chr5 99790294 99791506 -99838644 - L2 LINE L2 -1 3271 1814 314 321 191 30 chr5 99792791 99792959 -99837191 + MIR3 SINE MIR 12 206 -2 731 199 55 20 chr5 99792959 99793160 -99836990 + MER3 DNA MER1_type 2 209 0 186 43 0 0 chr5 99793698 99793721 -99836429 + (T)n Simple_repeat Simple_repeat 1 23 0 192 324 105 19 chr5 99794015 99794120 -99836030 + L2 LINE L2 3200 3313 0 1504 67 0 39 chr5 99795076 99795336 -99834814 - AluSg/x SINE Alu 0 309 98 232 344 57 25 chr5 99795367 99795489 -99834661 + L2 LINE L2 3134 3259 -13 289 176 0 0 chr5 99795991 99796042 -99834108 + L2 LINE L2 3263 3313 0 2280 79 10 0 chr5 99796895 99797185 -99832965 - AluY SINE Alu -18 293 1 708 185 266 0 chr5 99797709 99797882 -99832268 + MER20 DNA MER1_type 1 219 0 861 160 0 0 chr5 99797926 99798057 -99832093 + FLAM_C SINE Alu 1 131 -2 23 33 0 0 chr5 99799372 99799402 -99830748 + AT_rich Low_complexity Low_complexity 1 30 0 199 256 200 64 chr5 99800106 99800231 -99829919 - MIR3 SINE MIR -25 183 42 572 249 64 17 chr5 99800245 99800418 -99829732 + L2 LINE L2 3128 3308 -5 284 177 81 0 chr5 99800529 99800591 -99829559 + MER103 DNA DNA 11 77 -89 21 0 0 0 chr5 99801311 99801332 -99828818 + AT_rich Low_complexity Low_complexity 1 21 0 422 226 47 19 chr5 99801870 99801976 -99828174 - L2 LINE L2 0 3313 3205 511 265 159 0 chr5 99801990 99802160 -99827990 - L2 LINE L2 -701 2613 2417 260 274 4 40 chr5 99802187 99802445 -99827705 + (CATA)n Simple_repeat Simple_repeat 1 248 0 270 255 0 58 chr5 99802457 99802645 -99827505 + (CATA)n Simple_repeat Simple_repeat 4 180 0 267 278 70 164 chr5 99803795 99804069 -99826081 + L2 LINE L2 2955 3192 -80 2420 78 0 0 chr5 99804069 99804364 -99825786 - AluSg SINE Alu -15 295 1 267 278 70 164 chr5 99804364 99804431 -99825719 + L2 LINE L2 3192 3264 -8 180 97 0 0 chr5 99804589 99804620 -99825530 + (A)n Simple_repeat Simple_repeat 1 31 0 804 279 45 0 chr5 99805941 99806163 -99823987 + MIR SINE MIR 21 252 -10 234 0 0 0 chr5 99806604 99806630 -99823520 + (A)n Simple_repeat Simple_repeat 1 26 0 22 35 0 0 chr5 99807620 99807649 -99822501 + AT_rich Low_complexity Low_complexity 1 29 0 683 227 150 11 chr5 99808040 99808313 -99821837 + L1ME4a LINE L1 5575 5885 -236 22 0 0 0 chr5 99809953 99809975 -99820175 + AT_rich Low_complexity Low_complexity 1 22 0 263 160 0 0 chr5 99810006 99810056 -99820094 - L1ME3A LINE L1 -228 5942 5893 276 323 43 38 chr5 99810470 99810656 -99819494 + L2 LINE L2 2312 2498 -816 561 250 42 47 chr5 99810795 99811031 -99819119 - MER112 DNA MER1_type -24 236 2 320 164 9 2 chr5 99811311 99811543 -99818607 + AluJo SINE Alu 1 272 -30 242 307 57 11 chr5 99811752 99811840 -99818310 + L2 LINE L2 3176 3267 -5 419 39 0 0 chr5 99812274 99812325 -99817825 + AluY SINE Alu 244 294 -17 1595 181 29 4 chr5 99813250 99813531 -99816619 + AluJo SINE Alu 1 288 -24 24 32 0 0 chr5 99813531 99813562 -99816588 + AT_rich Low_complexity Low_complexity 1 31 0 196 350 50 67 chr5 99814133 99814253 -99815897 + L2 LINE L2 3153 3270 -2 249 315 14 0 chr5 99814397 99814470 -99815680 + MIR SINE MIR 33 106 -102 23 33 0 0 chr5 99815502 99815532 -99814618 + AT_rich Low_complexity Low_complexity 1 30 0 23 68 0 0 chr5 99817171 99817215 -99812935 + AT_rich Low_complexity Low_complexity 1 44 0 821 120 0 70 chr5 99817947 99818089 -99812061 + FLAM_C SINE Alu 1 132 -1 192 306 0 0 chr5 99820171 99820220 -99809930 - L3 LINE CR1 -2 1575 1527 428 296 43 48 chr5 99822269 99822499 -99807651 - MIR SINE MIR -14 248 20 2375 57 20 0 chr5 99822963 99823262 -99806888 + AluY SINE Alu 1 305 -6 379 248 217 19 chr5 99824651 99824812 -99805338 - MIR SINE MIR -18 244 52 21 0 0 0 chr5 99825153 99825174 -99804976 + AT_rich Low_complexity Low_complexity 1 21 0 600 73 0 0 chr5 99825681 99825763 -99804387 + (TA)n Simple_repeat Simple_repeat 1 82 0 2114 103 3 7 chr5 99825897 99826219 -99803931 + AluY SINE Alu 1 321 0 980 282 116 13 chr5 99826468 99826840 -99803310 - L2 LINE L2 -559 2755 2346 3180 97 2 2 chr5 99826840 99827285 -99802865 + L1PA15 LINE L1 5718 6162 -3 952 286 182 7 chr5 99827478 99827911 -99802239 - L2 LINE L2 -964 2350 1842 361 362 0 14 chr5 99827969 99828110 -99802040 + L2 LINE L2 3133 3271 -1 2048 80 24 103 chr5 99829210 99829549 -99800601 - AluYb8 SINE Alu -6 312 1 342 351 58 0 chr5 99829581 99829752 -99800398 + L2 LINE L2 2555 2735 -579 195 42 0 0 chr5 99830321 99830345 -99799805 + (GGAA)n Simple_repeat Simple_repeat 4 27 0 190 256 0 0 chr5 99831230 99831269 -99798881 - L2 LINE L2 -773 2541 2503 23 33 0 0 chr5 99833701 99833731 -99796419 + AT_rich Low_complexity Low_complexity 1 30 0 191 219 24 0 chr5 99834883 99834924 -99795226 + MIR SINE MIR 218 259 -3 210 71 0 0 chr5 99835320 99835348 -99794802 + (TG)n Simple_repeat Simple_repeat 2 29 0 509 296 147 70 chr5 99836102 99836734 -99793416 + L1M2 LINE L1 566 1246 -5603 216 0 0 0 chr5 99837312 99837336 -99792814 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 216 158 0 0 chr5 99838518 99838556 -99791594 + T-rich Low_complexity Low_complexity 1 38 0 555 276 48 65 chr5 99839856 99840193 -99789957 - MER102b DNA MER1_type 0 341 11 186 133 0 0 chr5 99840737 99840767 -99789383 + (TTA)n Simple_repeat Simple_repeat 2 31 0 666 247 26 0 chr5 99842071 99842278 -99787872 + FAM SINE Alu 1 75 0 2727 93 5 8 chr5 99842278 99842654 -99787496 + THE1C LTR MaLR 1 375 0 278 269 150 10 chr5 99842695 99842850 -99787300 - MIR SINE MIR -50 212 42 289 311 48 42 chr5 99843962 99844129 -99786021 - L2 LINE L2 -446 2868 2701 207 388 42 39 chr5 99844368 99844680 -99785470 - L2 LINE L2 -706 2608 2296 2520 224 55 29 chr5 99846362 99846763 -99783387 - L1ME1 LINE L1 -115 6051 5662 1407 181 101 17 chr5 99846763 99847050 -99783100 - AluJo SINE Alu -1 311 1 2520 224 55 29 chr5 99847050 99847698 -99782452 - L1ME1 LINE L1 -504 5662 4980 714 203 78 26 chr5 99848323 99848555 -99781595 - L1ME1 LINE L1 -1162 4984 4741 279 104 0 0 chr5 99848815 99848863 -99781287 + (CA)n Simple_repeat Simple_repeat 1 48 0 629 205 16 8 chr5 99850115 99850242 -99779908 - MER5A DNA MER1_type -6 183 56 200 323 0 31 chr5 99851354 99851419 -99778731 - L3 LINE CR1 -3 1574 1512 527 221 10 0 chr5 99851713 99851817 -99778333 + MIR SINE MIR 38 142 -120 1252 236 64 30 chr5 99851940 99852270 -99777880 - MLT1A1 LTR MaLR -2 363 23 5858 108 14 0 chr5 99852460 99853504 -99776646 - L1PA13 LINE L1 0 6163 5111 316 250 29 29 chr5 99853941 99854081 -99776069 - L1ME4a LINE L1 -27 6094 5955 2004 145 0 0 chr5 99854651 99854972 -99775178 + AluSx SINE Alu 1 321 0 1973 267 88 13 chr5 99855289 99856146 -99774004 - MER45C DNA AcHobo -1 952 1 557 231 210 0 chr5 99856243 99856386 -99773764 - MER5A DNA MER1_type 0 189 17 2278 88 0 3 chr5 99856409 99856706 -99773444 + AluSc SINE Alu 1 296 -13 350 175 50 0 chr5 99856709 99856789 -99773361 - L1MC4 LINE L1 -1 8041 7958 23 33 0 0 chr5 99856909 99856939 -99773211 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr5 99857127 99857150 -99773000 + (TG)n Simple_repeat Simple_repeat 2 24 0 567 174 0 37 chr5 99857150 99857259 -99772891 - L1MD2 LINE L1 -227 6132 6028 441 250 155 0 chr5 99857307 99857455 -99772695 + MIR SINE MIR 73 243 -19 23 33 0 0 chr5 99857655 99857685 -99772465 + AT_rich Low_complexity Low_complexity 1 30 0 336 228 11 22 chr5 99857853 99857945 -99772205 + L1ME3A LINE L1 5860 5950 -220 267 257 200 40 chr5 99858008 99858183 -99771967 + L1ME3A LINE L1 5962 6164 -6 232 328 0 0 chr5 99858918 99858979 -99771171 + L2 LINE L2 3245 3305 -8 21 36 0 0 chr5 99859435 99859463 -99770687 + AT_rich Low_complexity Low_complexity 1 28 0 576 204 182 11 chr5 99859544 99859842 -99770308 + MER33 DNA MER1_type 1 335 -28 1842 178 0 6 chr5 99859845 99860159 -99769991 + AluJo SINE Alu 1 312 0 259 277 45 71 chr5 99861983 99862095 -99768055 + MIR3 SINE MIR 47 155 -53 439 263 52 17 chr5 99862243 99862377 -99767773 + MER5B DNA MER1_type 50 176 -2 503 255 33 39 chr5 99862385 99862538 -99767612 + MIR SINE MIR 19 170 -92 1040 181 70 20 chr5 99862594 99862793 -99767357 - MER3 DNA MER1_type 0 209 1 204 97 0 0 chr5 99863182 99863213 -99766937 + (TG)n Simple_repeat Simple_repeat 1 31 0 741 316 4 22 chr5 99863417 99863645 -99766505 + MIR SINE MIR 29 252 -10 21 0 0 0 chr5 99864091 99864112 -99766038 + AT_rich Low_complexity Low_complexity 1 21 0 41 0 0 0 chr5 99864928 99864969 -99765181 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr5 99865258 99865279 -99764871 + AT_rich Low_complexity Low_complexity 1 21 0 872 215 12 0 chr5 99865555 99865718 -99764432 - FRAM SINE Alu -1 165 1 352 226 73 73 chr5 99865732 99865896 -99764254 - L1ME LINE L1 -400 5721 5558 1382 102 94 28 chr5 99866222 99866308 -99763842 + L1MA4A LINE L1 6023 6102 -201 2160 134 0 3 chr5 99866308 99866621 -99763529 - AluSx SINE Alu 0 312 1 1382 102 94 28 chr5 99866621 99866788 -99763362 + L1MA4A LINE L1 6102 6293 -10 367 282 17 81 chr5 99866820 99866994 -99763156 + L1ME1 LINE L1 7 169 -5901 364 225 0 11 chr5 99867031 99867120 -99763030 + L1ME1 LINE L1 4455 4542 -1538 2658 160 26 36 chr5 99867146 99867676 -99762474 + L1MD3 LINE L1 7471 7995 0 312 212 24 0 chr5 99867664 99867749 -99762401 + L1ME1 LINE L1 4548 4634 -1446 * 2916 203 74 57 chr5 99867821 99868192 -99761958 + L1ME1 LINE L1 4656 5019 -1081 873 186 106 10 chr5 99868192 99868391 -99761759 + MER20 DNA MER1_type 1 218 -1 2916 203 74 57 chr5 99868391 99869444 -99760706 + L1ME1 LINE L1 5019 6090 -10 244 235 0 0 chr5 99870638 99870689 -99759461 + MLT1K LTR MaLR 153 203 -385 293 286 77 90 chr5 99870837 99871071 -99759079 + LTR67 LTR ERVL 64 294 -263 668 281 11 0 chr5 99871469 99871654 -99758496 - MER5A DNA MER1_type 0 189 3 256 369 127 13 chr5 99872494 99872651 -99757499 + L2 LINE L2 3003 3177 -95 207 0 0 0 chr5 99872779 99872802 -99757348 + (T)n Simple_repeat Simple_repeat 1 23 0 308 188 0 0 chr5 99872939 99873003 -99757147 - L1MB8 LINE L1 0 6178 6115 5019 130 18 0 chr5 99873084 99873871 -99756279 - L1PB4 LINE L1 -8 6148 5348 2973 209 50 28 chr5 99873898 99874183 -99755967 - L1MB7 LINE L1 -120 6064 5787 1493 210 25 4 chr5 99874183 99874459 -99755691 - AluJo SINE Alu -30 282 1 2973 209 50 28 chr5 99874459 99875298 -99754852 - L1MB7 LINE L1 -397 5787 4906 311 318 136 19 chr5 99875798 99875952 -99754198 + MIR3 SINE MIR 10 181 -27 300 233 33 0 chr5 99875965 99876025 -99754125 - L2 LINE L2 -1 3271 3210 238 319 0 14 chr5 99877016 99877088 -99753062 - LTR67 LTR ERVL -3 554 484 * 685 270 103 70 chr5 99877030 99877459 -99752691 - MLT1K LTR MaLR -19 569 127 1783 160 0 20 chr5 99877771 99878064 -99752086 + AluJo SINE Alu 3 289 -23 2532 54 3 0 chr5 99878075 99878373 -99751777 + AluY SINE Alu 3 301 -10 509 174 20 0 chr5 99879165 99879263 -99750887 + L1MC4 LINE L1 7796 7895 -147 1468 278 102 4 chr5 99879619 99880140 -99750010 + HAL1 LINE L1 1317 1888 -619 245 249 129 40 chr5 99880266 99880467 -99749683 + HAL1 LINE L1 2289 2507 0 431 129 79 50 chr5 99880520 99880621 -99749529 + L1MC3 LINE L1 7682 7785 0 1251 92 55 46 chr5 99881081 99881299 -99748851 + MER30 DNA MER1_type 1 220 -10 22 0 0 0 chr5 99881646 99881668 -99748482 + AT_rich Low_complexity Low_complexity 1 22 0 853 183 0 37 chr5 99882267 99882431 -99747719 + MLT1A2 LTR MaLR 4 161 -213 2876 0 0 3 chr5 99882439 99882782 -99747368 + AluYa5 SINE Alu 1 342 0 1126 171 0 6 chr5 99882809 99882985 -99747165 + MLT1A2 LTR MaLR 189 363 -11 474 348 5 54 chr5 99883348 99883552 -99746598 + MLT1K LTR MaLR 82 275 -313 5812 167 23 6 chr5 99883632 99885126 -99745024 - L1PA16 LINE L1 0 6166 4633 1977 143 0 20 chr5 99885126 99885427 -99744723 - AluSx SINE Alu -17 295 1 5812 167 23 6 chr5 99885427 99885935 -99744215 - L1PA16 LINE L1 -1533 4633 4135 238 318 159 0 chr5 99885935 99886067 -99744083 + MLT1K LTR MaLR 422 574 -14 760 316 36 7 chr5 99886082 99886360 -99743790 + L3 LINE CR1 685 970 -607 345 249 207 16 chr5 99886367 99886560 -99743590 - L1M4 LINE L1 -1331 4815 4586 278 260 50 20 chr5 99887253 99887353 -99742797 + MIR3 SINE MIR 101 203 -5 304 250 176 29 chr5 99887577 99887713 -99742437 + MLT1H LTR MaLR 96 251 -298 21 0 0 0 chr5 99888123 99888144 -99742006 + AT_rich Low_complexity Low_complexity 1 21 0 476 239 65 27 chr5 99888157 99888341 -99741809 - L1MC4a LINE L1 -1901 5907 5717 6794 126 59 8 chr5 99888355 99889497 -99740653 - Tigger3b DNA MER2_type 0 1231 32 182 286 0 54 chr5 99889701 99889757 -99740393 + L2 LINE L2 3037 3089 -183 501 298 38 19 chr5 99889763 99889921 -99740229 - MIR SINE MIR -29 233 73 341 287 66 7 chr5 99890318 99890454 -99739696 - MIR SINE MIR -46 216 73 748 238 12 83 chr5 99890487 99890694 -99739456 - MIR SINE MIR -26 236 49 1279 208 32 55 chr5 99890694 99891098 -99739052 + MLT2C1 LTR ERVL 3 397 0 748 238 12 83 chr5 99891098 99891142 -99739008 - MIR SINE MIR -213 49 3 2446 88 0 0 chr5 99891645 99891951 -99738199 - AluY SINE Alu -5 306 1 21 57 0 0 chr5 99892551 99892586 -99737564 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 99892690 99892715 -99737435 + AT_rich Low_complexity Low_complexity 1 25 0 464 215 169 23 chr5 99894833 99895010 -99735140 - MIR SINE MIR -58 204 2 3193 107 48 42 chr5 99895201 99895724 -99734426 + MER1A DNA MER1_type 2 527 0 21 0 0 0 chr5 99896118 99896139 -99734011 + AT_rich Low_complexity Low_complexity 1 21 0 2375 74 0 3 chr5 99896262 99896559 -99733591 - AluY SINE Alu -15 296 1 1769 196 12 3 chr5 99896700 99897041 -99733109 - MER2 DNA MER2_type 0 344 1 2024 131 19 33 chr5 99897459 99897818 -99732332 - MLT2C1 LTR ERVL 0 397 44 1659 191 16 35 chr5 99899941 99900313 -99729837 - MLT1A1 LTR MaLR 0 365 1 389 293 161 41 chr5 99900339 99900656 -99729494 - L2 LINE L2 -24 3289 2935 1531 177 71 15 chr5 99900768 99901034 -99729116 + AluJb SINE Alu 5 285 -27 2358 217 48 35 chr5 99901298 99901741 -99728409 + Zaphod DNA AcHobo 169 625 -3406 1226 182 149 45 chr5 99901741 99902010 -99728140 + AluJo SINE Alu 2 298 -14 2358 217 48 35 chr5 99902010 99902233 -99727917 + Zaphod DNA AcHobo 625 844 -3187 3049 247 61 64 chr5 99902235 99903836 -99726314 + Zaphod DNA AcHobo 974 2569 -1462 451 256 76 46 chr5 99905491 99905943 -99724207 - MLT1H LTR MaLR 0 549 21 362 241 173 9 chr5 99906362 99906582 -99723568 - L2 LINE L2 -201 3112 2857 3307 206 72 14 chr5 99909182 99910147 -99720003 + Zaphod DNA AcHobo 3010 4030 -1 612 226 9 0 chr5 99910526 99910641 -99719509 + FLAM_C SINE Alu 7 122 -21 183 80 0 0 chr5 99910989 99911014 -99719136 + (A)n Simple_repeat Simple_repeat 1 25 0 1797 237 160 2 chr5 99911511 99911979 -99718171 - MLT1F LTR MaLR 0 542 1 192 295 147 58 chr5 99912106 99912330 -99717820 + MIR SINE MIR 13 256 -6 6455 131 23 33 chr5 99912554 99913745 -99716405 + L1M2 LINE L1 4112 5307 -984 837 169 0 0 chr5 99913745 99913875 -99716275 + FLAM_A SINE Alu 1 130 -3 6455 131 23 33 chr5 99913875 99914215 -99715935 + L1M2 LINE L1 5307 5649 -642 285 29 0 0 chr5 99914215 99914249 -99715901 + (CA)n Simple_repeat Simple_repeat 1 34 0 2379 149 25 20 chr5 99914285 99914775 -99715375 - L1MA8 LINE L1 -63 6228 5737 419 132 35 0 chr5 99914783 99914897 -99715253 + (TA)n Simple_repeat Simple_repeat 1 118 0 36 53 0 0 chr5 99914901 99914958 -99715192 + AT_rich Low_complexity Low_complexity 1 57 0 258 221 15 0 chr5 99914960 99915028 -99715122 + L1MA8 LINE L1 6217 6285 -6 184 324 42 14 chr5 99915187 99915258 -99714892 + MER5B DNA MER1_type 57 129 -49 258 56 0 0 chr5 99915484 99915520 -99714630 + (TG)n Simple_repeat Simple_repeat 2 37 0 346 245 59 83 chr5 99915787 99915991 -99714159 + L1MC4a LINE L1 5842 6040 -1768 245 239 15 30 chr5 99916196 99916263 -99713887 - L2 LINE L2 -1 3271 3206 551 255 51 108 chr5 99917396 99917866 -99712284 - MLT1F LTR MaLR 0 542 100 3446 171 75 37 chr5 99917879 99918111 -99712039 + L1MC3 LINE L1 6891 7113 -672 14262 82 2 1 chr5 99918111 99920843 -99709307 - L1PA7 LINE L1 -2 6152 3421 3446 171 75 37 chr5 99920843 99921465 -99708685 + L1MC3 LINE L1 7113 7777 -8 281 259 91 115 chr5 99921576 99922090 -99708060 + MLT1K LTR MaLR 76 577 -11 203 277 72 12 chr5 99922222 99922305 -99707845 + MIR SINE MIR 175 262 0 531 307 91 17 chr5 99922409 99922650 -99707500 + MIR SINE MIR 4 262 0 22 80 0 0 chr5 99922771 99922821 -99707329 + AT_rich Low_complexity Low_complexity 1 50 0 481 258 181 69 chr5 99923311 99923660 -99706490 - MLT1L LTR MaLR -223 392 5 1716 220 52 71 chr5 99923862 99923925 -99706225 + L1ME3A LINE L1 5524 5587 -583 1837 165 35 49 chr5 99923925 99924295 -99705855 + MLT1A1 LTR MaLR 1 365 0 1716 220 52 71 chr5 99924295 99924812 -99705338 + L1ME3A LINE L1 5587 6093 -77 2430 93 0 0 chr5 99924812 99925123 -99705027 + AluSq SINE Alu 1 311 -2 1716 220 52 71 chr5 99925123 99925190 -99704960 + L1ME3A LINE L1 6093 6160 -10 306 230 210 0 chr5 99925229 99925329 -99704821 - L2 LINE L2 -3 3310 3190 474 272 184 7 chr5 99925401 99925548 -99704602 - MIR SINE MIR -88 174 2 713 261 69 42 chr5 99925554 99925957 -99704193 - L2 LINE L2 -116 3197 2786 2959 59 0 0 chr5 99926431 99926786 -99703364 - THE1A LTR MaLR 0 355 1 548 319 84 58 chr5 99927367 99927796 -99702354 - L2 LINE L2 0 3272 2833 271 333 0 0 chr5 99927802 99927871 -99702279 - L2 LINE L2 -1 3312 3244 474 323 56 77 chr5 99927898 99928236 -99701914 - L2 LINE L2 -560 2754 2424 181 332 118 70 chr5 99929165 99930314 -99699836 - L2 LINE L2 -714 2600 1398 22 35 0 0 chr5 99930655 99930684 -99699466 + AT_rich Low_complexity Low_complexity 1 29 0 260 268 126 52 chr5 99931482 99931792 -99698358 + L1ME3A LINE L1 5691 6023 -147 28 0 0 0 chr5 99931859 99931887 -99698263 + AT_rich Low_complexity Low_complexity 1 28 0 497 280 140 9 chr5 99932169 99932383 -99697767 - L1MC/D LINE L1 -2144 5664 5423 1075 164 6 0 chr5 99932887 99933064 -99697086 - MER5B DNA MER1_type 0 178 1 842 212 6 12 chr5 99933989 99934159 -99695991 - FAM SINE Alu -6 169 1 218 186 0 23 chr5 99934340 99934383 -99695767 + MIR SINE MIR 112 153 -109 258 272 80 40 chr5 99934595 99934720 -99695430 + MIR SINE MIR 83 212 -50 190 245 20 0 chr5 99935029 99935078 -99695072 - L3 LINE CR1 -568 1009 960 264 279 54 45 chr5 99936123 99936234 -99693916 - MIR3 SINE MIR -15 193 82 1671 175 92 14 chr5 99936669 99937029 -99693121 - MER57A LTR ERV1 -15 388 1 1352 306 142 5 chr5 99937059 99937651 -99692499 - L3 LINE CR1 -167 1410 738 765 318 71 22 chr5 99937853 99938262 -99691888 + LTR16A LTR ERVL 16 444 -6 471 315 70 0 chr5 99938350 99938550 -99691600 + HERV16 LTR ERVL 117 330 -4666 3978 286 52 25 chr5 99939017 99940522 -99689628 + HERV16 LTR ERVL 1675 3247 -2058 1258 201 64 69 chr5 99940522 99940914 -99689236 - MLT1B LTR MaLR 0 390 1 3978 286 52 25 chr5 99940914 99941070 -99689080 + HERV16 LTR ERVL 3247 3397 -1908 479 336 106 25 chr5 99941177 99941386 -99688764 + HERV16 LTR ERVL 3605 3796 -1968 303 28 0 0 chr5 99941386 99941422 -99688728 + (TG)n Simple_repeat Simple_repeat 2 37 0 479 336 106 25 chr5 99941422 99941694 -99688456 + HERV16 LTR ERVL 3796 4125 -1639 809 346 66 9 chr5 99941719 99942679 -99687471 + HERV16 LTR ERVL 4253 5327 -336 1232 266 38 26 chr5 99942876 99943301 -99686849 + LTR16A LTR ERVL 7 436 -14 633 280 115 0 chr5 99943431 99943631 -99686519 - MIR SINE MIR -39 223 1 25 0 0 0 chr5 99945021 99945046 -99685104 + AT_rich Low_complexity Low_complexity 1 25 0 368 258 16 149 chr5 99945062 99945256 -99684894 + L1ME3 LINE L1 5988 6155 -7 26 0 0 0 chr5 99946385 99946411 -99683739 + AT_rich Low_complexity Low_complexity 1 26 0 1743 162 10 34 chr5 99946411 99946708 -99683442 - AluJo SINE Alu -22 290 1 17489 81 7 5 chr5 100047251 100049683 -99580467 - L1P LINE L1 -1439 4707 2271 1716 211 67 16 chr5 100049783 100050158 -99579992 + MLT1F LTR MaLR 149 542 0 393 22 0 0 chr5 100050689 100050735 -99579415 + (TG)n Simple_repeat Simple_repeat 1 46 0 264 205 0 103 chr5 100051298 100051376 -99578774 + MER5B DNA MER1_type 32 101 -77 243 122 24 0 chr5 100051570 100051611 -99578539 - tRNA-Met-e tRNA tRNA -33 42 1 382 189 31 34 chr5 100051623 100051806 -99578344 + MLT1K LTR MaLR 372 588 0 291 177 51 101 chr5 100051935 100052014 -99578136 + MER91C DNA MER1_type 36 110 -30 2200 96 13 3 chr5 100052123 100052424 -99577726 - AluSq SINE Alu -9 304 1 2190 97 0 7 chr5 100052620 100052908 -99577242 - AluSx SINE Alu -26 286 1 521 239 45 49 chr5 100054652 100054899 -99575251 + L1ME4a LINE L1 5874 6119 -2 315 289 0 0 chr5 100057332 100057422 -99572728 + MIR SINE MIR 148 237 -25 2224 102 0 23 chr5 100057806 100058154 -99571996 + AluSq SINE Alu 1 313 0 587 118 44 44 chr5 100058620 100058756 -99571394 - L1MA7 LINE L1 -1 6290 6155 4070 207 25 14 chr5 100058777 100059837 -99570313 - L1 LINE L1 -809 5573 4503 533 160 0 19 chr5 100059837 100059943 -99570207 - MSTA LTR MaLR 0 428 325 1389 156 100 7 chr5 100060061 100060331 -99569819 - MSTA LTR MaLR -133 295 1 8833 146 17 38 chr5 100060333 100061942 -99568208 - MSTA-int LTR MaLR -2 1578 3 1857 159 154 5 chr5 100061944 100062315 -99567835 - MSTA LTR MaLR 0 428 3 486 172 26 17 chr5 100062316 100062432 -99567718 - L1 LINE L1 -1874 4508 4392 * 30001 106 7 25 chr5 100062425 100068867 -99561283 - L1PA7 LINE L1 -3 6466 11 7793 203 35 24 chr5 100068866 100071206 -99558944 - L1 LINE L1 -1969 4413 2043 * 844 217 26 0 chr5 100071791 100071980 -99558170 - MER105 DNA DNA -10 194 1 1851 240 42 31 chr5 100072456 100073005 -99557145 + MLT1H1 LTR MaLR 1 555 0 2163 121 0 40 chr5 100074034 100074357 -99555793 + AluSx SINE Alu 1 310 -2 932 208 22 53 chr5 100075711 100075796 -99554354 - MIR SINE MIR -21 241 155 2573 144 41 5 chr5 100075796 100076207 -99553943 - MSTB LTR MaLR 0 426 1 932 208 22 53 chr5 100076207 100076347 -99553803 - MIR SINE MIR -107 155 23 887 152 4 140 chr5 100077980 100078223 -99551927 - MER20 DNA MER1_type -8 211 2 584 301 85 7 chr5 100078435 100078588 -99551562 - MIR3 SINE MIR -27 181 17 497 284 35 24 chr5 100080574 100080743 -99549407 - MIR3 SINE MIR -17 191 21 1775 181 4 0 chr5 100081763 100082064 -99548086 + AluSx SINE Alu 2 303 0 573 72 21 21 chr5 100082199 100082296 -99547854 + (TTTC)n Simple_repeat Simple_repeat 2 98 0 1986 168 0 0 chr5 100082310 100082619 -99547531 - AluJb SINE Alu -3 309 1 558 333 39 99 chr5 100083131 100083624 -99546526 + L2 LINE L2 2808 3270 -2 808 293 16 23 chr5 100083874 100084130 -99546020 + MIR SINE MIR 8 261 -1 571 235 59 0 chr5 100084232 100084385 -99545765 - MER105 DNA DNA -17 187 26 183 146 73 55 chr5 100084681 100084736 -99545414 + L2 LINE L2 2167 2222 -1092 531 69 0 0 chr5 100085199 100085271 -99544879 + (TC)n Simple_repeat Simple_repeat 1 72 0 292 82 82 0 chr5 100086985 100087034 -99543116 + MER116 DNA Mariner 5 57 -23 225 98 171 0 chr5 100087057 100087098 -99543052 + MER116 DNA Mariner 33 80 0 186 255 0 0 chr5 100087830 100087881 -99542269 - MIR3 SINE MIR -9 199 149 275 189 57 29 chr5 100088008 100088092 -99542058 - MIR3 SINE MIR -52 156 76 29 60 0 0 chr5 100089255 100089305 -99540845 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr5 100089329 100089353 -99540797 + AT_rich Low_complexity Low_complexity 1 24 0 194 208 125 42 chr5 100090642 100090714 -99539436 + MIR SINE MIR 64 141 -67 22 0 0 0 chr5 100090808 100090830 -99539320 + AT_rich Low_complexity Low_complexity 1 22 0 185 219 110 41 chr5 100090841 100090914 -99539236 + L2 LINE L2 1337 1414 -1900 976 329 127 31 chr5 100091903 100093081 -99537069 + L2 LINE L2 1615 2904 -410 209 261 0 0 chr5 100093629 100093675 -99536475 + MIR SINE MIR 32 77 -131 582 264 121 22 chr5 100098397 100098761 -99531389 + MER113 DNA MER1_type? 48 447 -74 780 222 27 5 chr5 100099163 100099348 -99530802 - MER5A DNA MER1_type 0 189 1 943 223 175 9 chr5 100099577 100099909 -99530241 + HsTC2 DNA Tc2 1 387 -1511 386 224 88 6 chr5 100099911 100100081 -99530069 + Charlie2 DNA MER1_type 2675 2858 -4 711 258 19 4 chr5 100100333 100100649 -99529501 + HsTC2 DNA Tc2 374 1896 -2 258 309 224 19 chr5 100100651 100100861 -99529289 + L2 LINE L2 3061 3313 0 1181 245 142 32 chr5 100102857 100103294 -99526856 - MLT1E LTR MaLR -107 486 2 682 351 63 27 chr5 100103299 100103709 -99526441 - L2 LINE L2 -688 2626 2202 720 353 94 18 chr5 100103753 100104713 -99525437 - HERVL LTR ERVL -850 4804 3808 570 270 112 65 chr5 100105287 100105949 -99524201 - L2 LINE L2 -1305 2009 1317 366 332 93 28 chr5 100106074 100106321 -99523829 - L2 LINE L2 -2856 458 196 189 0 0 0 chr5 100106399 100106420 -99523730 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr5 100106600 100106621 -99523529 + AT_rich Low_complexity Low_complexity 1 21 0 2532 133 123 92 chr5 100107320 100107964 -99522186 - MER4A LTR ERV1 0 664 1 883 268 49 31 chr5 100108531 100108856 -99521294 + MLT1I LTR MaLR 67 397 -12 1913 133 191 8 chr5 100109946 100110308 -99519842 + MSTA LTR MaLR 1 428 0 1407 267 44 35 chr5 100110524 100110671 -99519479 + L2 LINE L2 2233 2377 -937 2534 190 11 65 chr5 100110671 100111214 -99518936 + MLT2B2 LTR ERVL 1 514 -1 1407 267 44 35 chr5 100111214 100111546 -99518604 + L2 LINE L2 2377 2716 -598 305 219 116 52 chr5 100111562 100111717 -99518433 - HAL1 LINE L1 -13 2494 2330 481 196 18 36 chr5 100111743 100111855 -99518295 - MER104 DNA Tc2 -70 110 1 360 220 63 6 chr5 100111875 100112034 -99518116 + (TA)n Simple_repeat Simple_repeat 2 169 0 207 0 0 0 chr5 100112102 100112125 -99518025 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 22 35 0 0 chr5 100112142 100112171 -99517979 + AT_rich Low_complexity Low_complexity 1 29 0 29482 115 9 57 chr5 100112279 100112969 -99517181 - L1PA8 LINE L1 -2 6170 5449 2167 119 0 0 chr5 100112969 100113263 -99516887 - AluSc SINE Alu -15 294 1 29482 115 9 57 chr5 100113263 100119051 -99511099 - L1PA8 LINE L1 -723 5449 12 39874 62 3 1 chr5 100119104 100125242 -99504908 - L1PA5 LINE L1 -2 6152 1 810 263 179 51 chr5 100125291 100125487 -99504663 - HAL1 LINE L1 -330 2177 2008 2284 111 0 3 chr5 100125487 100125793 -99504357 + AluSq SINE Alu 1 305 -8 810 263 179 51 chr5 100125793 100126288 -99503862 - HAL1 LINE L1 -499 2008 1397 31 88 0 0 chr5 100126396 100126476 -99503674 + AT_rich Low_complexity Low_complexity 1 80 0 797 287 87 36 chr5 100126565 100127036 -99503114 - HAL1 LINE L1 -1509 998 504 575 268 52 5 chr5 100127044 100127238 -99502912 + L2 LINE L2 3098 3300 -13 40 21 0 0 chr5 100127394 100127441 -99502709 + AT_rich Low_complexity Low_complexity 1 47 0 190 268 0 155 chr5 100127443 100127540 -99502610 - MIR SINE MIR -73 135 54 210 273 172 30 chr5 100127545 100127644 -99502506 - L2 LINE L2 -36 3277 3165 343 310 57 70 chr5 100128835 100128993 -99501157 + L2 LINE L2 3116 3271 -1 311 282 218 11 chr5 100129274 100129448 -99500702 - MIR SINE MIR -6 256 47 1358 150 0 9 chr5 100131004 100131217 -99498933 - AluJo SINE Alu -1 311 101 354 330 72 55 chr5 100131844 100132374 -99497776 + LTR67 LTR ERVL 12 550 -7 180 0 0 0 chr5 100132686 100132706 -99497444 + (TG)n Simple_repeat Simple_repeat 2 21 0 491 250 10 115 chr5 100132760 100132815 -99497335 - L1ME4a LINE L1 -30 6091 6032 2017 169 15 13 chr5 100132815 100133169 -99496981 + MLT2C1 LTR ERVL 1 358 -39 366 85 0 0 chr5 100133169 100133228 -99496922 + (TA)n Simple_repeat Simple_repeat 2 60 0 2017 169 15 13 chr5 100133228 100133269 -99496881 + MLT2C1 LTR ERVL 358 397 0 491 250 10 115 chr5 100133269 100133329 -99496821 - L1ME4a LINE L1 -89 6032 5967 213 39 0 0 chr5 100133329 100133355 -99496795 + (TTTTC)n Simple_repeat Simple_repeat 5 30 0 491 250 10 115 chr5 100133355 100133400 -99496750 - L1ME4a LINE L1 -154 5967 5919 6240 141 26 61 chr5 100133400 100133701 -99496449 + Tigger3b DNA MER2_type 1 311 -2717 2075 153 3 0 chr5 100133701 100134009 -99496141 - AluSx SINE Alu -3 309 1 6240 141 26 61 chr5 100134009 100134983 -99495167 + Tigger3b DNA MER2_type 311 1231 0 491 250 10 115 chr5 100134983 100135132 -99495018 - L1ME4a LINE L1 -202 5919 5813 3172 140 11 56 chr5 100135132 100135775 -99494375 + L1MA9 LINE L1 5698 6311 -1 327 272 88 0 chr5 100135912 100136048 -99494102 - L1ME4a LINE L1 -478 5643 5496 325 319 58 37 chr5 100136129 100136317 -99493833 - L1ME4a LINE L1 -177 5944 5753 235 247 67 0 chr5 100136330 100136419 -99493731 - L1ME4a LINE L1 -439 5682 5588 5392 197 74 13 chr5 100137329 100138700 -99491450 + Charlie1a DNA MER1_type 1 1454 -1 381 292 36 54 chr5 100139532 100139700 -99490450 + MIR SINE MIR 65 229 -33 330 273 11 11 chr5 100139787 100139875 -99490275 - L2 LINE L2 0 3313 3226 221 320 0 90 chr5 100139878 100139978 -99490172 + L2 LINE L2 3205 3295 -18 479 277 0 0 chr5 100139988 100140100 -99490050 - MIR SINE MIR -88 174 63 367 319 159 66 chr5 100140236 100140716 -99489434 - L2 LINE L2 -10 3262 2700 2088 99 3 7 chr5 100140716 100140999 -99489151 - AluSc SINE Alu -10 299 18 367 319 159 66 chr5 100140999 100141242 -99488908 - L2 LINE L2 -572 2700 2481 185 333 29 0 chr5 100141457 100141526 -99488624 + L3 LINE CR1 1502 1572 -5 298 250 15 0 chr5 100141640 100141708 -99488442 + MER94 DNA DNA 66 134 0 313 269 79 4 chr5 100142672 100142790 -99487360 + MIR SINE MIR 5 141 -67 536 255 21 94 chr5 100143183 100143375 -99486775 + MIR SINE MIR 23 200 -62 556 271 56 90 chr5 100143902 100143953 -99486197 - MIR SINE MIR 0 262 211 2185 127 3 0 chr5 100143953 100144261 -99485889 + AluSq SINE Alu 2 310 -3 556 271 56 90 chr5 100144261 100144475 -99485675 - MIR SINE MIR -51 211 6 1933 186 27 25 chr5 100146164 100146652 -99483498 + L1MA9 LINE L1 5782 6270 -42 189 107 0 0 chr5 100146652 100146680 -99483470 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 1864 163 10 0 chr5 100146928 100147223 -99482927 + AluJb SINE Alu 1 298 -14 351 263 285 0 chr5 100148992 100149171 -99480979 - Charlie8 DNA MER1_type -2187 230 1 292 319 114 6 chr5 100150788 100150954 -99479196 + MIR SINE MIR 35 218 -44 216 283 19 0 chr5 100151462 100151515 -99478635 - L2 LINE L2 -31 3282 3229 190 262 78 58 chr5 100151706 100151809 -99478341 + MIR SINE MIR 112 216 -46 2841 78 3 0 chr5 100152701 100153071 -99477079 + L1PA7 LINE L1 5777 6147 -7 183 292 124 11 chr5 100153354 100153443 -99476707 - L3b LINE CR1 -95 1488 1390 2293 100 0 3 chr5 100153553 100153852 -99476298 + AluSx SINE Alu 1 298 -14 206 206 0 0 chr5 100154911 100154945 -99475205 + L2 LINE L2 3203 3236 -36 42 82 0 0 chr5 100155168 100155266 -99474884 + AT_rich Low_complexity Low_complexity 1 98 0 233 169 258 81 chr5 100156870 100156994 -99473156 + MER104 DNA Tc2 1 146 -34 193 279 135 58 chr5 100157976 100158080 -99472070 - L2 LINE L2 -10 3262 3151 2656 45 0 0 chr5 100158080 100158390 -99471760 + AluY SINE Alu 1 310 -1 562 251 45 86 chr5 100158873 100159140 -99471010 + L2 LINE L2 3041 3296 -17 1984 207 146 18 chr5 100159458 100160068 -99470082 + MER76 LTR ERV 1 688 0 1432 61 0 0 chr5 100160539 100160720 -99469430 - L1PA5 LINE L1 0 6154 5974 197 308 58 0 chr5 100160975 100161027 -99469123 - L3 LINE CR1 -9 1568 1514 261 330 10 94 chr5 100161509 100161712 -99468438 + MER5A DNA MER1_type 4 189 0 * 265 287 11 127 chr5 100161540 100161721 -99468429 - MER5A DNA MER1_type -23 166 7 486 305 102 25 chr5 100161981 100162217 -99467933 + MIR SINE MIR 9 262 0 1139 156 0 0 chr5 100162793 100162966 -99467184 + AluSg/x SINE Alu 131 303 -9 520 230 53 9 chr5 100163436 100163549 -99466601 - MIR3 SINE MIR -49 159 42 311 346 84 28 chr5 100164241 100164527 -99465623 + L1ME LINE L1 4914 5215 -931 791 263 48 24 chr5 100164572 100164929 -99465221 + L1ME LINE L1 5329 5701 -420 246 202 242 20 chr5 100166212 100166311 -99463839 + MIR SINE MIR 48 168 -94 949 159 0 0 chr5 100169077 100169228 -99460922 - AluSx SINE Alu -6 304 154 458 159 148 0 chr5 100169289 100169377 -99460773 - AluSx SINE Alu -168 145 45 207 0 0 0 chr5 100170026 100170049 -99460101 + (T)n Simple_repeat Simple_repeat 1 23 0 2227 117 0 3 chr5 100170791 100171091 -99459059 + AluSx SINE Alu 1 299 -13 2423 47 0 66 chr5 100171110 100171429 -99458721 + AluY SINE Alu 1 298 -13 576 170 20 0 chr5 100171429 100171529 -99458621 + MIR SINE MIR 59 160 -102 840 272 36 0 chr5 100171548 100171772 -99458378 - MIR SINE MIR -29 233 2 244 289 165 10 chr5 100171894 100171991 -99458159 + MIR3 SINE MIR 43 154 -54 685 270 249 8 chr5 100172410 100172803 -99457347 + LTR33 LTR ERVL 12 499 -22 375 297 0 11 chr5 100173556 100173647 -99456503 + MIR SINE MIR 16 105 -157 283 254 0 0 chr5 100173676 100173739 -99456411 + MIR SINE MIR 197 259 -3 400 255 80 45 chr5 100174849 100175049 -99455101 + MLT1K LTR MaLR 375 581 -7 183 80 0 0 chr5 100176239 100176264 -99453886 + (CAT)n Simple_repeat Simple_repeat 2 26 0 181 95 24 24 chr5 100176560 100176602 -99453548 + (TA)n Simple_repeat Simple_repeat 1 42 0 28 48 0 0 chr5 100176633 100176675 -99453475 + AT_rich Low_complexity Low_complexity 1 42 0 285 29 0 0 chr5 100176687 100176721 -99453429 + (TC)n Simple_repeat Simple_repeat 2 35 0 611 254 105 6 chr5 100176722 100176903 -99453247 - MIR SINE MIR -58 204 6 35 24 0 0 chr5 100177039 100177081 -99453069 + AT_rich Low_complexity Low_complexity 1 42 0 261 292 30 65 chr5 100177388 100177556 -99452594 - MIR SINE MIR -38 224 63 468 153 0 0 chr5 100178010 100178095 -99452055 + GA-rich Low_complexity Low_complexity 2 86 0 207 0 0 0 chr5 100179269 100179292 -99450858 + (A)n Simple_repeat Simple_repeat 1 23 0 605 256 32 0 chr5 100179485 100179610 -99450540 - MIR3 SINE MIR -11 197 69 605 313 78 5 chr5 100181677 100181894 -99448256 + MIR SINE MIR 12 244 -18 2157 114 0 0 chr5 100181952 100182233 -99447917 + AluSq SINE Alu 1 281 -32 739 29 20 10 chr5 100182234 100182336 -99447814 + (GAAA)n Simple_repeat Simple_repeat 2 104 0 214 244 89 0 chr5 100184686 100184731 -99445419 - L3 LINE CR1 -24 1553 1505 200 274 0 0 chr5 100186069 100186120 -99444030 + L2 LINE L2 3263 3313 0 22 70 0 0 chr5 100186199 100186242 -99443908 + AT_rich Low_complexity Low_complexity 1 43 0 2127 108 9 12 chr5 100186706 100187030 -99443120 - L1PA13 LINE L1 0 6163 5841 201 108 0 0 chr5 100191863 100191900 -99438250 + (TTTTTG)n Simple_repeat Simple_repeat 4 40 0 644 211 161 6 chr5 100194869 100195030 -99435120 + MER5A DNA MER1_type 4 189 0 813 296 103 26 chr5 100195086 100195434 -99434716 - L3 LINE CR1 -132 1445 1071 1915 221 58 22 chr5 100195473 100196025 -99434125 - L1MC4a LINE L1 0 7808 7237 1060 298 69 11 chr5 100196456 100196893 -99433257 + HAL1 LINE L1 2 463 -2044 252 282 24 48 chr5 100197252 100197376 -99432774 + Charlie8 DNA MER1_type 53 173 -2244 236 250 0 0 chr5 100197523 100197579 -99432571 + Charlie8 DNA MER1_type 2344 2399 -18 589 263 149 10 chr5 100198198 100198392 -99431758 + MIR SINE MIR 19 239 -23 225 346 67 10 chr5 100199281 100199385 -99430765 - MIR SINE MIR -106 156 47 475 286 180 0 chr5 100199455 100199633 -99430517 + MIR SINE MIR 53 262 0 191 258 90 56 chr5 100199902 100199991 -99430159 - MER5A DNA MER1_type -48 141 50 186 43 0 0 chr5 100200050 100200073 -99430077 + (CTG)n Simple_repeat Simple_repeat 2 24 0 448 269 19 12 chr5 100200078 100200238 -99429912 + CT-rich Low_complexity Low_complexity 2 162 0 338 224 122 10 chr5 100200869 100200967 -99429183 - MER5B DNA MER1_type 0 178 70 702 293 89 71 chr5 100201851 100202445 -99427705 - HAL1 LINE L1 -1412 1095 491 501 181 0 11 chr5 100202551 100202645 -99427505 + FRAM SINE Alu 7 99 -77 1511 179 3 36 chr5 100203116 100203418 -99426732 - AluJb SINE Alu -20 292 1 213 182 0 0 chr5 100204712 100204767 -99425383 + (CA)n Simple_repeat Simple_repeat 1 55 0 267 31 0 0 chr5 100205666 100205698 -99424452 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 223 317 0 0 chr5 100205698 100205758 -99424392 - L2 LINE L2 -13 3300 3241 339 228 93 47 chr5 100206197 100206390 -99423760 - HAL1 LINE L1 -23 2484 2283 1013 172 14 29 chr5 100206506 100206797 -99423353 + MER1B DNA MER1_type 1 339 0 1542 256 130 25 chr5 100206797 100207261 -99422889 - HAL1 LINE L1 -358 2149 1735 3073 130 24 64 chr5 100207261 100207852 -99422298 + L1PB4 LINE L1 5585 6151 -5 1542 256 130 25 chr5 100207852 100208151 -99421999 - HAL1 LINE L1 -772 1735 1306 286 227 14 149 chr5 100208414 100208555 -99421595 + L2 LINE L2 3151 3272 0 6985 57 4 2 chr5 100208620 100209911 -99420239 + L1PA7 LINE L1 4862 6154 0 2828 28 0 0 chr5 100209926 100210244 -99419906 + AluYb8 SINE Alu 1 318 0 441 306 106 0 chr5 100211476 100211656 -99418494 - MIR SINE MIR -62 200 2 928 217 204 11 chr5 100211980 100212362 -99417788 - MER113 DNA MER1_type? -23 498 43 277 330 167 24 chr5 100212920 100213214 -99416936 + L2 LINE L2 2929 3264 -49 451 281 28 6 chr5 100213402 100213580 -99416570 - Charlie8 DNA MER1_type -2190 227 46 247 319 159 9 chr5 100213866 100213979 -99416171 - L2 LINE L2 0 3272 3143 2669 92 16 3 chr5 100213992 100214361 -99415789 + THE1C LTR MaLR 1 374 -1 1080 322 69 22 chr5 100214408 100214902 -99415248 + L2 LINE L2 2461 2977 -337 1523 216 9 0 chr5 100215329 100215649 -99414501 + MER58B DNA MER1_type 1 323 -18 1562 69 9 9 chr5 100217608 100217824 -99412326 + L1PA8 LINE L1 5955 6170 -2 3114 175 50 20 chr5 100218120 100218827 -99411323 - L1MB7 LINE L1 0 6184 5457 24 32 0 0 chr5 100218951 100218982 -99411168 + AT_rich Low_complexity Low_complexity 1 31 0 259 216 0 0 chr5 100219188 100219239 -99410911 - L1M4 LINE L1 -671 5507 5457 24 32 0 0 chr5 100219362 100219393 -99410757 + AT_rich Low_complexity Low_complexity 1 31 0 315 319 7 28 chr5 100219873 100220014 -99410136 + L2 LINE L2 3160 3297 -16 320 236 106 57 chr5 100220129 100220252 -99409898 + MIR SINE MIR 134 262 0 1883 151 46 32 chr5 100220369 100220739 -99409411 + THE1C LTR MaLR 1 375 0 1143 266 45 58 chr5 100222479 100223204 -99406946 - L1M4 LINE L1 -1369 4777 4063 607 197 0 0 chr5 100223204 100223336 -99406814 - L1MA4 LINE L1 -2 6298 6167 1143 266 45 58 chr5 100223336 100223470 -99406680 - L1M4 LINE L1 -2083 4063 3929 3255 243 68 60 chr5 100223472 100225283 -99404867 - L1MC4a LINE L1 -743 5403 4867 4046 132 23 21 chr5 100225368 100226067 -99404083 + L1PB3 LINE L1 5448 6147 -7 194 91 30 0 chr5 100227468 100227501 -99402649 + GA-rich Low_complexity Low_complexity 2 35 0 309 214 43 0 chr5 100227509 100227579 -99402571 + L1MC4 LINE L1 6630 6702 -1340 210 71 0 0 chr5 100227876 100227904 -99402246 + (CA)n Simple_repeat Simple_repeat 1 28 0 507 17 0 0 chr5 100229453 100229513 -99400637 + (TG)n Simple_repeat Simple_repeat 1 60 0 332 264 11 0 chr5 100229990 100230077 -99400073 - MER117 DNA MER1_type -1 196 109 440 202 10 50 chr5 100230121 100230220 -99399930 + L2 LINE L2 3218 3312 -1 1135 215 95 31 chr5 100230531 100230921 -99399229 - MLT1C LTR MaLR -36 431 17 217 370 25 12 chr5 100230927 100231008 -99399142 - L2 LINE L2 -91 3181 3100 424 290 45 75 chr5 100231150 100231574 -99398576 - MLT1J LTR MaLR -100 411 1 227 323 123 28 chr5 100231591 100231811 -99398339 - L2 LINE L2 -241 3031 2791 502 271 184 5 chr5 100231813 100232031 -99398119 - LTR67 LTR ERVL 0 557 301 21 0 0 0 chr5 100234642 100234663 -99395487 + AT_rich Low_complexity Low_complexity 1 21 0 423 0 0 0 chr5 100234782 100234829 -99395321 + (CA)n Simple_repeat Simple_repeat 2 48 0 183 156 0 0 chr5 100235011 100235043 -99395107 + (CA)n Simple_repeat Simple_repeat 1 32 0 314 224 147 17 chr5 100237112 100237165 -99392985 - L2 LINE L2 0 3313 3268 2096 128 0 0 chr5 100237165 100237463 -99392687 - AluSc SINE Alu -11 298 1 314 224 147 17 chr5 100237463 100237525 -99392625 - L2 LINE L2 -45 3268 3183 665 327 168 30 chr5 100237560 100238681 -99391469 - L2 LINE L2 -252 3020 1726 238 178 22 0 chr5 100240624 100240669 -99389481 - L3 LINE CR1 -403 1174 1129 196 337 45 22 chr5 100241065 100241154 -99388996 + L2 LINE L2 3178 3268 -4 230 287 96 32 chr5 100241544 100241638 -99388512 - MIR SINE MIR -142 120 21 22 56 0 0 chr5 100243146 100243182 -99386968 + AT_rich Low_complexity Low_complexity 1 36 0 342 294 38 25 chr5 100244728 100244888 -99385262 + MER20B DNA MER1_type 3 164 -619 259 287 58 0 chr5 100247070 100247157 -99382993 + MER91C DNA MER1_type 1 92 -48 1977 257 97 37 chr5 100248004 100248057 -99382093 + L1ME3A LINE L1 4568 4616 -1554 345 82 0 0 chr5 100248057 100248106 -99382044 + (TG)n Simple_repeat Simple_repeat 2 50 0 1977 257 97 37 chr5 100248106 100248924 -99381226 + L1ME3A LINE L1 4616 5570 -600 2641 31 0 19 chr5 100248924 100249241 -99380909 + AluY SINE Alu 1 311 0 1977 257 97 37 chr5 100249241 100249855 -99380295 + L1ME3A LINE L1 5570 6145 -25 1897 137 18 0 chr5 100251477 100251790 -99378360 + AluSx SINE Alu 1 318 0 2191 75 7 29 chr5 100252556 100252862 -99377288 + AluY SINE Alu 1 299 -12 2750 65 3 0 chr5 100252972 100253343 -99376807 - L1PA8 LINE L1 0 6172 5801 3940 60 2 0 chr5 100252975 100253477 -99376673 - L1PA8 LINE L1 -3 6169 5667 227 170 11 75 chr5 100253882 100253976 -99376174 + T-rich Low_complexity Low_complexity 4 91 0 216 221 250 0 chr5 100254397 100254465 -99375685 - MIR SINE MIR -87 175 91 7486 33 0 0 chr5 100254585 100256189 -99373961 - L1PA4 LINE L1 -4 6151 4548 245 257 71 0 chr5 100256679 100256749 -99373401 + LTR16A LTR ERVL 326 400 -50 252 86 0 0 chr5 100256751 100256786 -99373364 + (A)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr5 100256821 100256844 -99373306 + AT_rich Low_complexity Low_complexity 1 23 0 3042 129 28 6 chr5 100256984 100257512 -99372638 - Tigger1 DNA MER2_type -3 2415 1876 * 3248 124 45 18 chr5 100257491 100258063 -99372087 - Tigger1 DNA MER2_type -1830 588 1 514 288 90 28 chr5 100258219 100258507 -99371643 - MLT1L LTR MaLR -143 472 167 303 272 34 27 chr5 100259106 100259253 -99370897 + L1M4 LINE L1 2295 2442 -3704 979 192 227 18 chr5 100259471 100259757 -99370393 + MER7A DNA MER2_type 2 345 -1 50 71 0 0 chr5 100260128 100260227 -99369923 + AT_rich Low_complexity Low_complexity 1 99 0 468 0 0 0 chr5 100260336 100260388 -99369762 + (TTTC)n Simple_repeat Simple_repeat 3 54 0 367 280 80 22 chr5 100260781 100261006 -99369144 - L1MC/D LINE L1 -2256 5552 5315 1771 248 55 14 chr5 100262339 100262904 -99367246 - L1ME1 LINE L1 -5 6161 5574 1310 86 6 0 chr5 100263052 100263226 -99366924 + AluSg/x SINE Alu 132 306 -4 364 259 134 0 chr5 100263849 100263961 -99366189 + L2 LINE L2 3186 3312 -1 2087 214 45 38 chr5 100264045 100264624 -99365526 - MER76 LTR ERV -25 663 81 252 306 60 67 chr5 100264678 100264962 -99365188 - L2 LINE L2 -81 3232 2951 378 0 0 0 chr5 100265712 100265754 -99364396 + (TTA)n Simple_repeat Simple_repeat 2 43 0 789 176 0 0 chr5 100265755 100265880 -99364270 - FLAM_C SINE Alu -16 127 3 390 278 111 11 chr5 100265936 100266116 -99364034 + MIR SINE MIR 20 217 -45 584 298 38 43 chr5 100266532 100266767 -99363383 + MIR SINE MIR 6 239 -23 494 276 80 23 chr5 100268271 100268659 -99361491 + L1MC5 LINE L1 7498 7907 -54 2393 69 3 0 chr5 100268868 100269159 -99360991 - AluSc SINE Alu -13 296 5 595 303 16 21 chr5 100269682 100269870 -99360280 + L2 LINE L2 3126 3312 -1 272 307 26 35 chr5 100269985 100270099 -99360051 - MER5A DNA MER1_type -28 161 49 190 204 23 0 chr5 100270183 100270227 -99359923 + L2 LINE L2 3269 3313 0 212 302 135 8 chr5 100270837 100270963 -99359187 + MIR3 SINE MIR 67 208 0 497 259 103 22 chr5 100270963 100271187 -99358963 - L2 LINE L2 -37 3276 3035 289 203 40 27 chr5 100271384 100271458 -99358692 - Charlie8 DNA MER1_type -2237 180 106 1907 205 30 22 chr5 100271474 100271933 -99358217 - MLT1C LTR MaLR -2 465 3 280 217 98 33 chr5 100272066 100272158 -99357992 + L2 LINE L2 3194 3291 -22 183 80 0 0 chr5 100272163 100272188 -99357962 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 1763 154 3 21 chr5 100272448 100272772 -99357378 - AluSx SINE Alu 0 319 1 536 272 75 6 chr5 100273308 100273481 -99356669 + LTR33A LTR ERVL 4 188 -335 184 325 50 0 chr5 100274584 100274664 -99355486 - MIR3 SINE MIR -6 202 119 274 310 11 0 chr5 100274700 100274787 -99355363 - MER81 DNA DNA 0 114 27 818 298 16 27 chr5 100275564 100275822 -99354328 - MIR SINE MIR 0 262 8 1916 248 113 24 chr5 100276372 100276521 -99353629 + L1ME3A LINE L1 5317 5451 -719 2669 28 0 19 chr5 100276521 100276838 -99353312 + AluY SINE Alu 1 311 0 1916 248 113 24 chr5 100276838 100277449 -99352701 + L1ME3A LINE L1 5451 6145 -25 1889 140 18 0 chr5 100279071 100279384 -99350766 + AluSx SINE Alu 1 318 0 2262 72 7 26 chr5 100280150 100280454 -99349696 + AluY SINE Alu 1 298 -13 3960 58 2 0 chr5 100280567 100281069 -99349081 - L1PA8 LINE L1 -3 6169 5667 227 170 11 75 chr5 100281474 100281568 -99348582 + T-rich Low_complexity Low_complexity 4 91 0 216 221 250 0 chr5 100281989 100282057 -99348093 - MIR SINE MIR -87 175 91 7452 35 0 0 chr5 100282177 100283781 -99346369 - L1PA4 LINE L1 -4 6151 4548 245 257 71 0 chr5 100284271 100284341 -99345809 + LTR16A LTR ERVL 326 400 -50 252 86 0 0 chr5 100284343 100284378 -99345772 + (A)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr5 100284413 100284436 -99345714 + AT_rich Low_complexity Low_complexity 1 23 0 3040 129 28 6 chr5 100284576 100285104 -99345046 - Tigger1 DNA MER2_type -3 2415 1876 * 3225 126 45 18 chr5 100285083 100285655 -99344495 - Tigger1 DNA MER2_type -1830 588 1 489 292 90 28 chr5 100285811 100286099 -99344051 - MLT1L LTR MaLR -143 472 167 303 272 34 27 chr5 100286698 100286845 -99343305 + L1M4 LINE L1 2295 2442 -3704 995 189 227 18 chr5 100287063 100287349 -99342801 + MER7A DNA MER2_type 2 345 -1 50 71 0 0 chr5 100287720 100287819 -99342331 + AT_rich Low_complexity Low_complexity 1 99 0 324 0 0 0 chr5 100287928 100287964 -99342186 + (TTTC)n Simple_repeat Simple_repeat 3 38 0 367 280 80 22 chr5 100288357 100288582 -99341568 - L1MC/D LINE L1 -2256 5552 5315 1763 248 63 14 chr5 100289915 100290488 -99339662 - L1ME1 LINE L1 -5 6161 5561 1310 86 6 0 chr5 100290628 100290802 -99339348 + AluSg/x SINE Alu 134 308 -4 364 259 134 0 chr5 100291425 100291537 -99338613 + L2 LINE L2 3186 3312 -1 2070 211 50 42 chr5 100291621 100292199 -99337951 - MER76 LTR ERV -25 663 81 252 306 60 67 chr5 100292253 100292537 -99337613 - L2 LINE L2 -81 3232 2951 243 0 0 0 chr5 100293287 100293314 -99336836 + (TTA)n Simple_repeat Simple_repeat 2 28 0 775 184 0 0 chr5 100293315 100293440 -99336710 - FLAM_C SINE Alu -16 127 3 390 278 111 11 chr5 100293496 100293676 -99336474 + MIR SINE MIR 20 217 -45 584 298 38 43 chr5 100294092 100294327 -99335823 + MIR SINE MIR 6 239 -23 17645 36 8 3 chr5 100294944 100297869 -99332281 + L1PA4 LINE L1 3223 6155 0 2387 82 9 0 chr5 100297890 100298221 -99331929 + L1PA7 LINE L1 5815 6148 -6 242 200 14 0 chr5 100298245 100298289 -99331861 + (TA)n Simple_repeat Simple_repeat 2 49 -23 2786 13 0 0 chr5 100298289 100298594 -99331556 - AluY SINE Alu -6 305 1 242 200 14 0 chr5 100298594 100298619 -99331531 + (TA)n Simple_repeat Simple_repeat 49 72 0 180 0 0 0 chr5 100298690 100298710 -99331440 + (CA)n Simple_repeat Simple_repeat 1 20 0 1247 266 37 30 chr5 100298791 100299358 -99330792 + L1MC4a LINE L1 5293 5863 -1945 1319 213 42 64 chr5 100299363 100299889 -99330261 + MER39 LTR ERV1 15 707 0 1894 139 36 0 chr5 100301137 100301417 -99328733 + AluJb SINE Alu 1 290 -22 30 27 0 0 chr5 100301529 100301566 -99328584 + AT_rich Low_complexity Low_complexity 1 37 0 252 0 0 0 chr5 100301578 100301606 -99328544 + (TG)n Simple_repeat Simple_repeat 2 29 0 664 161 18 42 chr5 100301753 100301921 -99328229 + L1MA6 LINE L1 6137 6300 0 24 32 0 0 chr5 100303284 100303315 -99326835 + AT_rich Low_complexity Low_complexity 1 31 0 188 65 0 32 chr5 100303401 100303432 -99326718 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 2377 110 0 0 chr5 100304783 100305092 -99325058 + AluSx SINE Alu 1 309 -3 24 0 0 0 chr5 100305887 100305911 -99324239 + AT_rich Low_complexity Low_complexity 1 24 0 272 362 72 22 chr5 100306622 100306760 -99323390 + L2 LINE L2 3124 3268 -4 615 252 144 64 chr5 100308139 100308452 -99321698 + L2 LINE L2 2976 3313 0 458 281 38 46 chr5 100308485 100308705 -99321445 - MIR SINE MIR -19 243 25 2367 86 0 0 chr5 100308706 100308997 -99321153 - AluSx SINE Alu -17 295 5 566 225 25 65 chr5 100309815 100309849 -99320301 - L1ME2 LINE L1 -9 6155 6121 1879 149 3 33 chr5 100309849 100310150 -99320000 + AluJo SINE Alu 1 292 -20 566 225 25 65 chr5 100310150 100310315 -99319835 - L1ME2 LINE L1 -43 6121 5964 948 293 39 32 chr5 100310970 100311380 -99318770 - MLT1J LTR MaLR -94 417 5 607 241 87 98 chr5 100313455 100313998 -99316152 - MER34C LTR ERV1 -19 566 30 1174 186 46 63 chr5 100314096 100314786 -99315364 - MER4A LTR ERV1 0 685 2 206 143 20 41 chr5 100314967 100315016 -99315134 + (TAA)n Simple_repeat Simple_repeat 2 49 0 602 309 59 42 chr5 100315345 100315581 -99314569 - MIR SINE MIR -1 261 22 240 157 20 0 chr5 100316752 100316803 -99313347 - L1MA9 LINE L1 -1 6311 6260 1922 146 52 22 chr5 100316951 100317313 -99312837 + THE1C LTR MaLR 3 375 0 581 301 107 45 chr5 100317315 100317519 -99312631 - L2 LINE L2 -7 3306 3069 204 40 0 0 chr5 100317519 100317544 -99312606 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 581 301 107 45 chr5 100317544 100317695 -99312455 - L2 LINE L2 -244 3069 2929 421 309 140 16 chr5 100317777 100318020 -99312130 - L2 LINE L2 -979 2335 2063 232 249 20 122 chr5 100318062 100318139 -99312011 + HAL1 LINE L1 6 89 -2418 1670 190 0 20 chr5 100318139 100318439 -99311711 - AluJb SINE Alu -14 298 5 232 249 20 122 chr5 100318439 100318558 -99311592 + HAL1 LINE L1 89 182 -2325 1485 252 45 97 chr5 100318869 100319324 -99310826 + HAL1 LINE L1 745 1222 -1285 671 183 0 25 chr5 100319324 100319444 -99310706 + FLAM_A SINE Alu 3 119 -14 1485 252 45 97 chr5 100319444 100319787 -99310363 + HAL1 LINE L1 1222 1485 -1022 2061 115 3 65 chr5 100319787 100319918 -99310232 + AluJb SINE Alu 5 143 -169 2106 131 3 0 chr5 100319918 100320209 -99309941 + AluSq SINE Alu 1 292 -21 2061 115 3 65 chr5 100320209 100320400 -99309750 + AluJb SINE Alu 143 307 -5 1485 252 45 97 chr5 100320400 100320575 -99309575 + HAL1 LINE L1 1485 1668 -839 3868 217 25 25 chr5 100320754 100321753 -99308397 + Charlie1a DNA MER1_type 6 1004 -451 2029 116 8 0 chr5 100321755 100322085 -99308065 + AluSg SINE Alu 23 539 -33 1058 98 6 22 chr5 100322085 100322268 -99307882 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2029 116 8 0 chr5 100322268 100322303 -99307847 + AluSg SINE Alu 539 572 0 231 198 12 37 chr5 100322303 100322384 -99307766 + HAL1 LINE L1 2074 2152 -355 319 306 88 36 chr5 100322405 100322598 -99307552 + HAL1b LINE L1 733 935 -413 310 140 158 79 chr5 100322666 100322830 -99307320 + HAL1 LINE L1 2226 2402 -105 322 165 0 88 chr5 100322854 100322913 -99307237 - MER53 DNA DNA 0 189 139 2650 36 0 0 chr5 100322913 100323220 -99306930 - AluY SINE Alu -4 307 1 322 165 0 88 chr5 100323220 100323251 -99306899 - MER53 DNA DNA -50 139 107 180 0 0 0 chr5 100323379 100323399 -99306751 + (T)n Simple_repeat Simple_repeat 1 20 0 2201 117 0 3 chr5 100323418 100323717 -99306433 + AluSq SINE Alu 1 298 -15 334 286 45 20 chr5 100323717 100323916 -99306234 - L2 LINE L2 -1319 1995 1792 22 0 0 0 chr5 100326007 100326029 -99304121 + AT_rich Low_complexity Low_complexity 1 22 0 459 268 35 10 chr5 100326657 100326855 -99303295 - L1MEc LINE L1 -3677 2538 2336 715 169 14 7 chr5 100326880 100327022 -99303128 - L1MC2 LINE L1 -222 6122 5980 1633 242 98 22 chr5 100327085 100327758 -99302392 - L1MEc LINE L1 -4046 2350 1627 847 167 65 0 chr5 100327777 100327963 -99302187 - L1MC2 LINE L1 -10 6334 6137 3462 188 39 33 chr5 100327963 100328783 -99301367 - L1MC3 LINE L1 -191 7663 6839 4172 184 41 46 chr5 100328795 100329371 -99300779 - L1MC3 LINE L1 -743 5472 4894 2460 53 7 3 chr5 100329371 100329673 -99300477 + AluY SINE Alu 1 303 -8 4172 184 41 46 chr5 100329673 100330110 -99300040 - L1MC3 LINE L1 -1321 4894 5228 6165 58 10 0 chr5 100330110 100330900 -99299250 + L1PA8 LINE L1 5372 6169 -3 4172 184 41 46 chr5 100330900 100331860 -99298290 - L1MC3 LINE L1 -986 5229 4265 1088 229 82 3 chr5 100331852 100332378 -99297772 + L1MEc LINE L1 2134 2733 -3874 * 936 224 19 5 chr5 100332403 100332608 -99297542 - L1MC3 LINE L1 -6154 242 35 3619 298 38 11 chr5 100332721 100334130 -99296020 - ERVL LTR ERVL -1245 4519 2989 670 340 44 6 chr5 100334126 100334479 -99295671 - ERVL LTR ERVL -2245 2751 2456 * 1991 220 72 34 chr5 100334479 100335010 -99295140 - MLT2B3 LTR ERVL 0 554 4 1126 304 45 34 chr5 100335013 100336093 -99294057 - ERVL LTR ERVL -3266 2498 1347 229 220 50 110 chr5 100336096 100336196 -99293954 + MER53 DNA DNA 1 94 -95 24 32 0 0 chr5 100336736 100336767 -99293383 + AT_rich Low_complexity Low_complexity 1 31 0 33915 104 11 10 chr5 100336770 100342582 -99287568 + L1PA7 LINE L1 13 5829 -325 41116 44 6 1 chr5 100342583 100348710 -99281440 + L1PA4 LINE L1 1 6155 0 2369 85 9 0 chr5 100348730 100349061 -99281089 + L1PA7 LINE L1 5815 6148 -6 197 139 23 0 chr5 100349085 100349128 -99281022 + (TA)n Simple_repeat Simple_repeat 2 45 0 2798 13 3 0 chr5 100349131 100349441 -99280709 - AluY SINE Alu 0 311 1 198 0 0 0 chr5 100349537 100349559 -99280591 + (CA)n Simple_repeat Simple_repeat 1 22 0 1254 266 37 30 chr5 100349641 100350208 -99279942 + L1MC4a LINE L1 5293 5863 -1945 1316 207 88 66 chr5 100350227 100350739 -99279411 + MER39 LTR ERV1 51 707 0 1894 139 36 0 chr5 100351989 100352269 -99277881 + AluJb SINE Alu 1 290 -22 30 27 0 0 chr5 100352381 100352418 -99277732 + AT_rich Low_complexity Low_complexity 1 37 0 396 0 0 0 chr5 100352430 100352474 -99277676 + (TG)n Simple_repeat Simple_repeat 2 45 0 646 167 18 42 chr5 100352621 100352789 -99277361 + L1MA6 LINE L1 6137 6300 0 24 32 0 0 chr5 100354153 100354184 -99275966 + AT_rich Low_complexity Low_complexity 1 31 0 188 65 0 32 chr5 100354270 100354301 -99275849 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 2352 111 0 0 chr5 100355652 100355958 -99274192 + AluSx SINE Alu 1 306 -6 232 175 0 25 chr5 100356690 100356730 -99273420 + MIR SINE MIR 37 75 -187 24 0 0 0 chr5 100356754 100356778 -99273372 + AT_rich Low_complexity Low_complexity 1 24 0 272 362 72 22 chr5 100357489 100357627 -99272523 + L2 LINE L2 3124 3268 -4 615 252 144 64 chr5 100359006 100359319 -99270831 + L2 LINE L2 2976 3313 0 458 281 38 46 chr5 100359352 100359572 -99270578 - MIR SINE MIR -19 243 25 2377 86 0 0 chr5 100359573 100359865 -99270285 - AluSx SINE Alu -16 296 5 1253 206 44 34 chr5 100360681 100360715 -99269435 - L1ME2 LINE L1 -9 6415 6383 1860 152 3 33 chr5 100360715 100361017 -99269133 + AluJo SINE Alu 1 293 -19 1253 206 44 34 chr5 100361017 100361370 -99268780 - L1ME2 LINE L1 -41 6383 6024 6472 221 86 78 chr5 100361381 100361969 -99268181 - L1ME2 LINE L1 -816 5590 5008 189 0 0 0 chr5 100361969 100361990 -99268160 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 6472 221 86 78 chr5 100361990 100362657 -99267493 - L1ME2 LINE L1 -1398 5008 4348 1657 184 0 0 chr5 100362657 100362935 -99267215 - AluJb SINE Alu -5 307 30 6472 221 86 78 chr5 100362935 100363363 -99266787 - L1ME2 LINE L1 -2058 4348 3925 189 0 0 0 chr5 100363363 100363384 -99266766 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 1947 151 0 0 chr5 100363386 100363665 -99266485 - AluSx SINE Alu -32 280 2 6472 221 86 78 chr5 100363665 100363852 -99266298 - L1ME2 LINE L1 -2481 3925 3741 2202 92 13 9 chr5 100363852 100364167 -99265983 - L1PA10 LINE L1 -11 6157 5842 6472 221 86 78 chr5 100364167 100364893 -99265257 - L1ME2 LINE L1 -2665 3741 3022 253 83 0 0 chr5 100364893 100364929 -99265221 + MADE1 DNA Mariner 1 36 -44 6472 221 86 78 chr5 100364929 100365560 -99264590 - L1ME2 LINE L1 -3384 3022 2296 2644 240 58 33 chr5 100365593 100366817 -99263333 - L1ME2 LINE L1 -5253 1156 9 25 0 0 0 chr5 100367217 100367242 -99262908 + AT_rich Low_complexity Low_complexity 1 25 0 416 263 167 6 chr5 100367524 100367680 -99262470 - MER5A DNA MER1_type 0 189 9 237 381 24 32 chr5 100367688 100367814 -99262336 + L3 LINE CR1 1043 1167 -410 1557 191 92 3 chr5 100367815 100368150 -99262000 + MLT1A1 LTR MaLR 1 365 0 402 285 101 24 chr5 100368276 100368606 -99261544 + L1ME LINE L1 5348 5706 -415 2355 63 0 3 chr5 100368628 100368943 -99261207 + AluY SINE Alu 1 314 0 276 344 128 44 chr5 100368989 100369169 -99260981 + L3 LINE CR1 1368 1562 -15 31 44 0 0 chr5 100369748 100369793 -99260357 + AT_rich Low_complexity Low_complexity 1 45 0 580 308 46 38 chr5 100370436 100370676 -99259474 + MIR SINE MIR 21 262 0 252 189 14 68 chr5 100370889 100370963 -99259187 - MIR SINE MIR -120 88 19 1951 156 15 24 chr5 100371079 100371419 -99258731 - MER1B DNA MER1_type 0 337 1 896 211 255 9 chr5 100371543 100372090 -99258060 - LTR50 LTR ERVL -19 776 3 582 215 26 91 chr5 100373015 100373223 -99256927 - MIR SINE MIR -2 260 62 496 313 72 32 chr5 100373829 100374078 -99256072 - MIR SINE MIR -2 260 2 2533 81 0 0 chr5 100375217 100375524 -99254626 - AluSc SINE Alu -2 307 1 413 152 203 0 chr5 100377193 100377272 -99252878 + MER5A DNA MER1_type 12 106 -83 33 43 0 0 chr5 100377868 100377915 -99252235 + AT_rich Low_complexity Low_complexity 1 47 0 3264 120 42 6 chr5 100378219 100378768 -99251382 - LTR24B LTR ERV1 -7 569 1 494 276 80 23 chr5 100380010 100380398 -99249752 + L1MC5 LINE L1 7498 7907 -54 2393 69 3 0 chr5 100380607 100380898 -99249252 - AluSc SINE Alu -13 296 5 595 303 16 21 chr5 100381420 100381608 -99248542 + L2 LINE L2 3126 3312 -1 270 330 28 9 chr5 100381723 100381832 -99248318 - MER5A DNA MER1_type -28 161 51 190 204 23 0 chr5 100381921 100381965 -99248185 + L2 LINE L2 3269 3313 0 212 302 135 8 chr5 100382575 100382701 -99247449 + MIR3 SINE MIR 67 208 0 497 259 103 22 chr5 100382701 100382925 -99247225 - L2 LINE L2 -37 3276 3035 289 203 40 27 chr5 100383122 100383196 -99246954 - Charlie8 DNA MER1_type -2248 169 95 1913 207 30 22 chr5 100383212 100383671 -99246479 - MLT1C LTR MaLR -2 465 3 280 217 98 33 chr5 100383804 100383896 -99246254 + L2 LINE L2 3194 3291 -22 183 80 0 0 chr5 100383901 100383926 -99246224 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 1763 154 3 21 chr5 100384186 100384510 -99245640 - AluSx SINE Alu 0 319 1 197 33 33 0 chr5 100384776 100384806 -99245344 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 256 309 45 81 chr5 100384821 100385044 -99245106 + MLT1J LTR MaLR 242 456 -55 536 272 75 6 chr5 100385062 100385235 -99244915 + LTR33A LTR ERVL 4 188 -335 26 0 0 0 chr5 100386300 100386326 -99243824 + AT_rich Low_complexity Low_complexity 1 26 0 184 325 50 0 chr5 100387222 100387302 -99242848 - MIR3 SINE MIR -6 202 119 274 310 11 0 chr5 100387338 100387425 -99242725 - MER81 DNA DNA 0 114 27 818 298 16 27 chr5 100388202 100388460 -99241690 - MIR SINE MIR 0 262 8 1626 92 6 160 chr5 100388892 100389217 -99240933 + AluSg1 SINE Alu 21 295 -14 1961 164 0 0 chr5 100389753 100390046 -99240104 - AluSx SINE Alu -19 293 1 227 330 44 0 chr5 100390502 100390593 -99239557 + L2 LINE L2 2258 2352 -962 585 170 0 0 chr5 100390626 100390767 -99239383 + (TG)n Simple_repeat Simple_repeat 1 141 0 310 238 238 0 chr5 100391245 100391350 -99238800 + L2 LINE L2 3134 3263 -9 344 274 58 47 chr5 100391358 100391548 -99238602 + L2 LINE L2 2703 2894 -420 2266 79 10 3 chr5 100391976 100392267 -99237883 + AluY SINE Alu 1 293 -18 1671 164 7 20 chr5 100393455 100393748 -99236402 + AluSx SINE Alu 1 289 -23 2518 65 0 3 chr5 100394095 100394405 -99235745 - AluY SINE Alu -2 309 1 399 284 61 20 chr5 100394454 100394651 -99235499 + L2 LINE L2 2855 3059 -213 1094 210 5 0 chr5 100394721 100394921 -99235229 + MER45B DNA AcHobo 1 201 -839 1185 214 54 16 chr5 100394964 100395277 -99234873 + MLT1A1 LTR MaLR 30 354 -11 3147 217 63 6 chr5 100395284 100396081 -99234069 + MER45B DNA AcHobo 195 1036 -4 2262 180 40 30 chr5 100397395 100397894 -99232256 + MLT1D LTR MaLR 1 504 -1 1269 174 50 50 chr5 100398121 100398443 -99231707 - MLT1B LTR MaLR -68 322 1 232 339 0 0 chr5 100399233 100399295 -99230855 + polypurine Low_complexity Low_complexity 2 63 0 1353 199 113 66 chr5 100399964 100400461 -99229689 + MLT2B1 LTR ERVL 1 520 0 222 37 0 0 chr5 100401307 100401334 -99228816 + (A)n Simple_repeat Simple_repeat 1 27 0 201 333 0 0 chr5 100402439 100402502 -99227648 + CT-rich Low_complexity Low_complexity 4 66 0 5184 144 89 64 chr5 100403499 100404955 -99225195 + pTR5 LTR ERV1 769 2438 0 326 284 0 0 chr5 100404958 100405025 -99225125 - MER81 DNA DNA -44 70 4 400 323 65 13 chr5 100405037 100405192 -99224958 + MIR SINE MIR 63 225 -37 210 71 0 0 chr5 100405418 100405446 -99224704 + (T)n Simple_repeat Simple_repeat 1 28 0 1951 168 61 2 chr5 100405457 100405823 -99224327 + MER47B DNA MER2_type 28 415 -3 520 290 36 114 chr5 100406398 100406498 -99223652 - MLT1J LTR MaLR 0 511 405 2306 152 19 19 chr5 100406498 100406873 -99223277 - THE1C LTR MaLR 0 375 1 520 290 36 114 chr5 100406873 100407102 -99223048 - MLT1J LTR MaLR -106 405 236 2333 104 0 0 chr5 100407102 100407410 -99222740 - AluSg SINE Alu -2 308 1 520 290 36 114 chr5 100407410 100407603 -99222547 - MLT1J LTR MaLR -275 236 29 2298 102 0 7 chr5 100408903 100409197 -99220953 - AluSg SINE Alu -18 292 1 1448 201 42 11 chr5 100409748 100410032 -99220118 - AluJb SINE Alu -19 293 1 265 238 150 0 chr5 100410474 100410554 -99219596 + L1ME4a LINE L1 5974 6065 -56 342 80 0 0 chr5 100411294 100411344 -99218806 + (TC)n Simple_repeat Simple_repeat 1 50 0 314 254 90 33 chr5 100411462 100411584 -99218566 + MIR SINE MIR 16 144 -64 964 290 50 35 chr5 100411762 100412158 -99217992 + LTR16B LTR ERVL 43 444 -20 283 309 168 40 chr5 100412457 100412903 -99217247 + L2 LINE L2 2809 3311 -2 200 344 40 40 chr5 100413181 100413332 -99216818 + MIR SINE MIR 35 185 -77 316 271 26 86 chr5 100414577 100414728 -99215422 + MIR SINE MIR 15 156 -106 325 67 0 22 chr5 100414959 100415004 -99215146 + MSTD LTR MaLR 1 44 -352 1230 215 131 31 chr5 100415111 100415432 -99214718 + MSTD LTR MaLR 44 396 0 531 295 146 18 chr5 100416101 100416430 -99213720 - L2 LINE L2 -2 3311 2941 2234 108 3 0 chr5 100416538 100416833 -99213317 + AluSx SINE Alu 1 296 -16 1528 40 0 0 chr5 100416865 100417039 -99213111 - AluY SINE Alu -137 174 1 2297 189 70 94 chr5 100417040 100417233 -99212917 - L1M4 LINE L1 -505 5669 5473 234 0 0 0 chr5 100417233 100417259 -99212891 + (TTA)n Simple_repeat Simple_repeat 3 28 0 2297 189 70 94 chr5 100417259 100418190 -99211960 - L1M4 LINE L1 -701 5473 4591 2197 115 0 16 chr5 100418190 100418504 -99211646 - AluSq SINE Alu -4 309 1 2297 189 70 94 chr5 100418504 100418739 -99211411 - L1M4 LINE L1 -1583 4591 4352 254 325 106 38 chr5 100420655 100420920 -99209230 - L3b LINE CR1 -8 1575 1293 415 292 83 14 chr5 100421260 100421404 -99208746 + MIR SINE MIR 102 255 -7 182 164 91 18 chr5 100421446 100421501 -99208649 + MIR SINE MIR 103 161 -101 23 78 0 0 chr5 100421854 100421905 -99208245 + AT_rich Low_complexity Low_complexity 1 51 0 585 250 176 6 chr5 100422415 100422591 -99207559 - MIR SINE MIR -26 236 31 2258 119 0 0 chr5 100423352 100423664 -99206486 + AluSx SINE Alu 1 312 0 1041 214 70 51 chr5 100425806 100426180 -99203970 - LTR16A LTR ERVL -69 381 1 22 0 0 0 chr5 100426494 100426516 -99203634 + AT_rich Low_complexity Low_complexity 1 22 0 267 289 111 24 chr5 100426799 100427007 -99203143 + L2 LINE L2 2812 3037 -235 358 264 157 8 chr5 100427443 100427564 -99202586 + L2 LINE L2 3173 3311 -2 2135 116 0 23 chr5 100427773 100428074 -99202076 - AluSq SINE Alu -15 298 5 1028 241 4 29 chr5 100428088 100428333 -99201817 - MIR SINE MIR -21 241 3 1324 140 29 86 chr5 100428542 100428702 -99201448 + L1MB8 LINE L1 5883 6018 -160 2021 130 10 17 chr5 100428702 100428837 -99201313 + AluSx SINE Alu 3 137 -175 2236 117 0 0 chr5 100428837 100429144 -99201006 + AluSc SINE Alu 1 307 -2 2021 130 10 17 chr5 100429144 100429309 -99200841 + AluSx SINE Alu 137 301 -11 1324 140 29 86 chr5 100429309 100429462 -99200688 + L1MB8 LINE L1 6018 6178 0 24 32 0 0 chr5 100429662 100429693 -99200457 + AT_rich Low_complexity Low_complexity 1 31 0 2308 198 42 49 chr5 100429764 100429937 -99200213 - L1MD3 LINE L1 -15 7980 7807 2206 105 7 3 chr5 100429937 100430241 -99199909 + AluSx SINE Alu 1 305 -7 2308 198 42 49 chr5 100430241 100430637 -99199513 - L1MD3 LINE L1 -188 7807 7415 235 182 18 36 chr5 100430637 100430692 -99199458 - MLT1F1 LTR MaLR -437 130 77 25 31 0 0 chr5 100430845 100430877 -99199273 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 100430922 100430943 -99199207 + AT_rich Low_complexity Low_complexity 1 21 0 40 59 0 0 chr5 100431082 100431150 -99199000 + AT_rich Low_complexity Low_complexity 1 68 0 831 291 77 45 chr5 100431333 100431471 -99198679 - L2 LINE L2 -52 3261 3129 2125 111 10 0 chr5 100431471 100431760 -99198390 + AluSq SINE Alu 1 292 -21 831 291 77 45 chr5 100431760 100432023 -99198127 - L2 LINE L2 -184 3129 2847 747 143 20 54 chr5 100432138 100432285 -99197865 - MER65A LTR ERV1 0 445 304 * 3993 126 54 29 chr5 100432273 100432761 -99197389 - Tigger3b DNA MER2_type -2323 705 194 1818 165 7 3 chr5 100432761 100433064 -99197086 - AluJo SINE Alu -8 304 1 3993 126 54 29 chr5 100433064 100433260 -99196890 - Tigger3b DNA MER2_type -2834 194 4 212 330 87 37 chr5 100433924 100434142 -99196008 - L2 LINE L2 -703 2611 2383 400 271 68 27 chr5 100434306 100434482 -99195668 - MIR SINE MIR -56 152 3 193 167 28 0 chr5 100435119 100435155 -99194995 - MER5B DNA MER1_type -2 176 140 385 313 87 20 chr5 100435236 100435462 -99194688 + MIR SINE MIR 5 240 -22 989 160 16 52 chr5 100435808 100436002 -99194148 + MER5A DNA MER1_type 2 188 -1 2412 58 0 0 chr5 100436009 100436301 -99193849 + AluY SINE Alu 4 295 -16 2710 142 53 0 chr5 100436827 100437279 -99192871 - L1MA6 LINE L1 -1 6299 5824 423 190 61 129 chr5 100437279 100437442 -99192708 + MIR SINE MIR 48 199 -63 2548 147 34 27 chr5 100437474 100437644 -99192506 + MER65A LTR ERV1 1 168 -277 2383 123 131 13 chr5 100437644 100438025 -99192125 - MSTA LTR MaLR -2 426 1 2548 147 34 27 chr5 100438025 100438296 -99191854 + MER65A LTR ERV1 168 445 0 388 291 191 0 chr5 100438410 100438551 -99191599 - MER5A DNA MER1_type 0 189 22 685 114 0 0 chr5 100438862 100438967 -99191183 + THE1B-int LTR MaLR 1476 1580 0 2336 121 8 91 chr5 100438967 100439364 -99190786 + THE1B LTR MaLR 1 364 0 6267 184 62 3 chr5 100439364 100439922 -99190228 + L1PA16 LINE L1 3835 4358 -1808 192 77 0 0 chr5 100439922 100439948 -99190202 + (CA)n Simple_repeat Simple_repeat 1 26 0 6267 184 62 3 chr5 100439948 100441593 -99188557 + L1PA16 LINE L1 4358 6166 0 261 163 0 0 chr5 100441852 100441901 -99188249 + (CATA)n Simple_repeat Simple_repeat 2 50 0 1144 255 81 14 chr5 100442003 100442435 -99187715 - L1M4 LINE L1 -1299 4847 4387 588 269 57 10 chr5 100442441 100442634 -99187516 - MIR SINE MIR -58 204 3 183 212 0 0 chr5 100442808 100442841 -99187309 - MER5A DNA MER1_type -86 103 71 243 232 182 10 chr5 100442979 100443078 -99187072 - MIR SINE MIR -78 184 69 214 241 19 0 chr5 100443071 100443125 -99187025 - MER5A DNA MER1_type -132 57 3 * 2140 154 36 14 chr5 100443965 100444322 -99185828 + MER47A DNA MER2_type 2 366 0 3230 96 25 14 chr5 100444794 100445234 -99184916 - MLT2A2 LTR ERVL -8 445 1 372 345 8 60 chr5 100445489 100445724 -99184426 - MIR SINE MIR -31 231 9 432 97 0 0 chr5 100445757 100445819 -99184331 + (CA)n Simple_repeat Simple_repeat 2 63 0 2487 76 0 10 chr5 100446512 100446826 -99183324 + AluY SINE Alu 1 311 0 5127 146 91 68 chr5 100447344 100448822 -99181328 + pTR5 LTR ERV1 743 2438 0 314 299 0 0 chr5 100448825 100448892 -99181258 - MER81 DNA DNA -44 70 4 400 323 65 13 chr5 100448904 100449059 -99181091 + MIR SINE MIR 63 225 -37 1951 168 61 2 chr5 100449320 100449686 -99180464 + MER47B DNA MER2_type 28 415 -3 520 290 36 114 chr5 100450261 100450361 -99179789 - MLT1J LTR MaLR 0 511 405 2306 152 19 19 chr5 100450361 100450736 -99179414 - THE1C LTR MaLR 0 375 1 520 290 36 114 chr5 100450736 100450965 -99179185 - MLT1J LTR MaLR -106 405 236 2337 104 0 0 chr5 100450965 100451273 -99178877 - AluSg SINE Alu -2 308 1 520 290 36 114 chr5 100451273 100451466 -99178684 - MLT1J LTR MaLR -275 236 29 2434 85 0 7 chr5 100451863 100452169 -99177981 - AluSg SINE Alu -6 304 1 1448 201 42 11 chr5 100452720 100453004 -99177146 - AluJb SINE Alu -19 293 1 255 228 165 0 chr5 100453446 100453525 -99176625 + L1ME4a LINE L1 5974 6065 -56 342 80 0 0 chr5 100454265 100454315 -99175835 + (TC)n Simple_repeat Simple_repeat 1 50 0 909 298 45 30 chr5 100454761 100455157 -99174993 + LTR16B LTR ERVL 43 444 -20 23 0 0 0 chr5 100457788 100457811 -99172339 + AT_rich Low_complexity Low_complexity 1 23 0 2514 43 0 3 chr5 100458270 100458573 -99171577 - AluY SINE Alu -9 302 1 790 251 25 15 chr5 100459734 100459933 -99170217 + MIR SINE MIR 24 224 -38 32 26 0 0 chr5 100459964 100460003 -99170147 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr5 100460127 100460148 -99170002 + AT_rich Low_complexity Low_complexity 1 21 0 25 95 0 0 chr5 100460580 100460654 -99169496 + AT_rich Low_complexity Low_complexity 1 74 0 33 73 0 0 chr5 100460662 100460730 -99169420 + AT_rich Low_complexity Low_complexity 1 68 0 2259 94 0 13 chr5 100460909 100461218 -99168932 + AluSq SINE Alu 1 305 -8 2673 26 3 0 chr5 100461975 100462280 -99167870 + AluYb8 SINE Alu 2 307 -11 221 276 48 9 chr5 100462576 100462681 -99167469 + L2 LINE L2 3119 3227 -86 1872 125 4 7 chr5 100462739 100463046 -99167104 + AluSg1 SINE Alu 1 306 0 278 314 71 24 chr5 100463150 100463319 -99166831 - MIR SINE MIR 0 262 86 22 35 0 0 chr5 100463548 100463577 -99166573 + AT_rich Low_complexity Low_complexity 1 29 0 573 312 23 9 chr5 100464124 100464339 -99165811 - MIR SINE MIR -24 238 21 251 367 110 0 chr5 100465649 100465758 -99164392 - MIR SINE MIR -140 122 2 1406 212 49 35 chr5 100466262 100466668 -99163482 + MLT1C LTR MaLR 56 467 0 274 240 67 67 chr5 100467327 100467431 -99162719 - MIR SINE MIR -56 206 103 1049 135 0 0 chr5 100467439 100467587 -99162563 - AluSq/x SINE Alu -164 148 1 257 0 0 29 chr5 100468040 100468074 -99162076 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 303 242 117 33 chr5 100468396 100468516 -99161634 - MER103 DNA DNA -19 147 18 1534 224 3 0 chr5 100469004 100469298 -99160852 - AluJo SINE Alu -15 297 3 25 0 0 0 chr5 100469304 100469329 -99160821 + AT_rich Low_complexity Low_complexity 1 25 0 363 277 45 45 chr5 100469543 100469698 -99160452 + L2 LINE L2 968 1122 -2192 861 203 66 119 chr5 100469728 100470071 -99160079 - MLT1A1 LTR MaLR -55 341 1 23 0 0 0 chr5 100470213 100470236 -99159914 + AT_rich Low_complexity Low_complexity 1 23 0 1740 179 3 3 chr5 100470504 100470805 -99159345 - AluJo SINE Alu -10 302 2 363 23 0 0 chr5 100470881 100470925 -99159225 + (CA)n Simple_repeat Simple_repeat 2 45 0 23 0 0 0 chr5 100471299 100471322 -99158828 + AT_rich Low_complexity Low_complexity 1 23 0 245 186 0 0 chr5 100473059 100473118 -99157032 + L1MC4 LINE L1 6647 6705 -1337 25 65 0 0 chr5 100473367 100473413 -99156737 + AT_rich Low_complexity Low_complexity 1 46 0 1931 192 11 0 chr5 100473641 100474006 -99156144 - L1MB7 LINE L1 -199 5985 5617 1530 138 53 7 chr5 100474146 100474428 -99155722 - Tigger2 DNA MER2_type -2423 295 1 1735 174 7 3 chr5 100474739 100475044 -99155106 - AluSx SINE Alu -6 306 1 221 191 0 0 chr5 100475553 100475595 -99154555 + L2 LINE L2 3269 3310 -3 220 261 250 0 chr5 100476206 100476294 -99153856 + MIR SINE MIR 81 190 -72 24 53 0 0 chr5 100476445 100476483 -99153667 + AT_rich Low_complexity Low_complexity 1 38 0 298 295 74 0 chr5 100476830 100476925 -99153225 - MER5A DNA MER1_type -87 102 1 187 261 78 33 chr5 100476941 100477094 -99153056 - MER5C DNA MER1_type -38 286 127 34 84 0 0 chr5 100477414 100477497 -99152653 + AT_rich Low_complexity Low_complexity 1 83 0 27 29 0 0 chr5 100479460 100479494 -99150656 + AT_rich Low_complexity Low_complexity 1 34 0 452 135 0 0 chr5 100480221 100480295 -99149855 - L1MB5 LINE L1 -9 6165 6092 27 0 0 0 chr5 100482226 100482253 -99147897 + AT_rich Low_complexity Low_complexity 1 27 0 216 0 0 0 chr5 100482953 100482977 -99147173 + (T)n Simple_repeat Simple_repeat 1 24 0 461 129 14 0 chr5 100482983 100483053 -99147097 - AluJ/FLAM SINE Alu -241 71 1 2188 80 0 17 chr5 100483731 100484064 -99146086 + AluY SINE Alu 1 328 0 217 239 28 0 chr5 100484390 100484461 -99145689 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 604 208 121 64 chr5 100484496 100484669 -99145481 + MER20 DNA MER1_type 37 219 0 2236 89 3 26 chr5 100485235 100485538 -99144612 + AluSc SINE Alu 1 296 -13 489 199 84 8 chr5 100486478 100486609 -99143541 - MLT1C LTR MaLR -326 141 1 347 343 49 7 chr5 100486966 100487109 -99143041 - L2 LINE L2 -8 3264 3116 213 39 0 0 chr5 100487111 100487137 -99143013 + (CATA)n Simple_repeat Simple_repeat 4 29 0 218 288 72 58 chr5 100487266 100487405 -99142745 - L2 LINE L2 -159 3154 3014 284 273 100 27 chr5 100487896 100488006 -99142144 + MIR3 SINE MIR 84 201 -7 1582 163 102 3 chr5 100489164 100489477 -99140673 - L1MC1 LINE L1 0 6333 5990 438 312 63 25 chr5 100489838 100490075 -99140075 - L1MCc LINE L1 -5049 1374 1129 425 306 61 10 chr5 100490691 100490887 -99139263 - L1MCc LINE L1 -6192 231 26 222 204 0 0 chr5 100491157 100491206 -99138944 + T-rich Low_complexity Low_complexity 4 52 0 33 25 0 0 chr5 100491526 100491566 -99138584 + AT_rich Low_complexity Low_complexity 1 40 0 368 219 38 57 chr5 100491719 100491824 -99138326 + MLT1K LTR MaLR 371 473 -115 301 279 57 33 chr5 100492212 100492334 -99137816 + MER103 DNA DNA 3 127 -39 665 301 159 78 chr5 100492407 100493197 -99136953 + L2 LINE L2 766 1665 -1649 405 0 0 0 chr5 100493197 100493242 -99136908 + (TG)n Simple_repeat Simple_repeat 1 45 0 665 301 159 78 chr5 100493242 100493509 -99136641 + L2 LINE L2 1665 1909 -1405 1798 198 64 15 chr5 100493609 100494262 -99135888 - L1M4 LINE L1 -543 5631 4951 239 0 0 31 chr5 100494262 100494294 -99135856 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 427 200 0 0 chr5 100494296 100494376 -99135774 - AluJb SINE Alu -196 116 37 24 0 0 0 chr5 100497354 100497378 -99132772 + AT_rich Low_complexity Low_complexity 1 24 0 1975 124 20 3 chr5 100497379 100497677 -99132473 + AluSg SINE Alu 1 303 -7 665 161 34 0 chr5 100497677 100497795 -99132355 - AluJo/FLAM SINE Alu -190 122 1 255 162 0 0 chr5 100497799 100497836 -99132314 - tRNA-Leu-CTT tRNA tRNA -48 37 1 438 316 78 35 chr5 100499585 100499980 -99130170 + L1ME LINE L1 5380 5791 -379 23 33 0 0 chr5 100499980 100500010 -99130140 + AT_rich Low_complexity Low_complexity 1 30 0 1885 122 3 0 chr5 100500500 100500794 -99129356 + L1P4 LINE L1 3718 4012 -2134 6100 128 14 19 chr5 100500797 100501786 -99128364 + L1PA7 LINE L1 10 993 -5468 8778 93 8 1 chr5 100501786 100501957 -99128193 + L1PA7 LINE L1 4407 4575 -1894 1933 59 4 48 chr5 100501957 100502227 -99127923 - AluY SINE Alu -13 298 41 8778 93 8 1 chr5 100502227 100504122 -99126028 + L1PA7 LINE L1 4575 6467 -2 8534 126 19 1 chr5 100504125 100505653 -99124497 + L1P4 LINE L1 3996 5548 -620 528 124 0 0 chr5 100505708 100505813 -99124337 + (TCTCCC)n Simple_repeat Simple_repeat 1 105 0 9688 208 21 21 chr5 100505914 100506647 -99123503 - L1 LINE L1 -978 5168 4436 2359 102 0 0 chr5 100506647 100506951 -99123199 + AluSq SINE Alu 1 304 -9 9688 208 21 21 chr5 100506951 100507007 -99123143 - L1 LINE L1 -1710 4436 4381 216 0 0 0 chr5 100507007 100507031 -99123119 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 9688 208 21 21 chr5 100507031 100508611 -99121539 - L1 LINE L1 -1764 4382 2798 21 57 0 0 chr5 100508879 100508914 -99121236 + AT_rich Low_complexity Low_complexity 1 35 0 224 151 0 19 chr5 100510509 100510562 -99119588 + (TA)n Simple_repeat Simple_repeat 2 53 0 200 309 0 0 chr5 100511279 100511334 -99118816 - L3b LINE CR1 -339 1244 1190 23 0 0 0 chr5 100511347 100511370 -99118780 + AT_rich Low_complexity Low_complexity 1 23 0 6980 54 5 51 chr5 100511370 100512462 -99117688 - SVA Other Other -723 1375 432 225 197 158 13 chr5 100513065 100513141 -99117009 + MIR SINE MIR 104 190 -72 377 283 189 0 chr5 100513202 100513308 -99116842 + L2 LINE L2 3147 3272 0 375 235 113 17 chr5 100514154 100514269 -99115881 - L2 LINE L2 -1 3312 3187 6231 143 8 7 chr5 100515639 100517026 -99113124 - L1PB1 LINE L1 -2 6149 4760 2135 132 28 25 chr5 100517026 100517389 -99112761 + THE1B LTR MaLR 1 364 0 6231 143 8 7 chr5 100517389 100517465 -99112685 - L1PB1 LINE L1 -1391 4760 4686 2156 116 3 13 chr5 100517529 100517832 -99112318 - AluSq SINE Alu -13 300 1 237 278 143 60 chr5 100518056 100518272 -99111878 - L2 LINE L2 -2498 816 583 255 229 0 0 chr5 100518368 100518416 -99111734 + L2 LINE L2 3254 3301 -12 2416 248 21 12 chr5 100518737 100519343 -99110807 + L1ME3A LINE L1 5559 6170 0 312 27 0 0 chr5 100519399 100519436 -99110714 + (TG)n Simple_repeat Simple_repeat 2 38 0 1886 119 55 0 chr5 100520358 100520651 -99109499 + AluSx SINE Alu 1 309 -3 282 325 12 25 chr5 100520897 100521060 -99109090 + GA-rich Low_complexity Low_complexity 3 163 0 202 175 25 0 chr5 100522006 100522046 -99108104 - L2 LINE L2 -4 3309 3269 296 318 11 11 chr5 100522154 100522242 -99107908 + MIR3 SINE MIR 8 95 -113 2728 115 16 5 chr5 100522413 100522838 -99107312 + L1M1 LINE L1 5327 5756 -547 341 297 95 27 chr5 100522884 100523032 -99107118 - MIR SINE MIR -31 231 74 24 53 0 0 chr5 100523256 100523294 -99106856 + AT_rich Low_complexity Low_complexity 1 38 0 524 45 0 0 chr5 100524184 100524251 -99105899 - L1MB2 LINE L1 -36 6135 6069 21 0 0 0 chr5 100525670 100525691 -99104459 + AT_rich Low_complexity Low_complexity 1 21 0 262 307 9 77 chr5 100525767 100526002 -99104148 + L2 LINE L2 2190 2488 -826 1174 153 0 0 chr5 100526050 100526220 -99103930 + AluJb SINE Alu 121 290 -22 697 308 65 22 chr5 100527444 100527766 -99102384 + L2 LINE L2 2978 3313 0 240 266 21 173 chr5 100527764 100528001 -99102149 - MIR SINE MIR -13 249 49 * 2212 129 3 0 chr5 100528405 100528714 -99101436 + AluSx SINE Alu 1 310 -2 28 0 0 0 chr5 100529189 100529217 -99100933 + AT_rich Low_complexity Low_complexity 1 28 0 183 268 0 0 chr5 100529247 100529288 -99100862 - L2 LINE L2 -4 3309 3269 194 308 84 63 chr5 100529404 100529547 -99100603 - L2 LINE L2 -230 3083 2938 358 250 30 10 chr5 100529629 100529729 -99100421 - L2 LINE L2 -381 2932 2831 346 292 107 18 chr5 100530615 100530783 -99099367 - MIR SINE MIR -40 222 40 2395 97 0 0 chr5 100531502 100531810 -99098340 - AluSg SINE Alu -2 308 1 446 259 7 36 chr5 100532129 100532268 -99097882 - LTR27 LTR ERV1 -2 634 500 2148 170 155 50 chr5 100532279 100532605 -99097545 - LTR28 LTR ERV1 -421 599 309 2241 119 7 0 chr5 100532605 100532908 -99097242 + AluSx SINE Alu 2 306 -6 2148 170 155 50 chr5 100532908 100533123 -99097027 - LTR28 LTR ERV1 -711 309 1 2076 120 7 10 chr5 100533231 100533530 -99096620 + AluSx SINE Alu 1 298 -14 255 295 29 23 chr5 100533645 100533818 -99096332 + L1M4 LINE L1 2975 3148 -2998 220 296 127 0 chr5 100534133 100534204 -99095946 + L2 LINE L2 3234 3313 0 265 330 0 10 chr5 100536324 100536427 -99093723 - MIR SINE MIR -63 199 98 4526 207 36 11 chr5 100536621 100538000 -99092150 - L1M4 LINE L1 -547 5637 4226 203 125 25 0 chr5 100539005 100539045 -99091105 + GA-rich Low_complexity Low_complexity 1 41 0 2234 101 10 0 chr5 100540174 100540472 -99089678 - AluSx SINE Alu -11 301 1 2740 77 3 0 chr5 100540571 100540923 -99089227 - THE1A LTR MaLR 0 355 3 11693 91 2 1 chr5 100540925 100542503 -99087647 - THE1A-int LTR MaLR 0 1580 1 2688 84 3 3 chr5 100542503 100542858 -99087292 - THE1A LTR MaLR 0 355 1 871 212 0 22 chr5 100544662 100544841 -99085309 + FAM SINE Alu 1 175 0 481 42 28 14 chr5 100544846 100544918 -99085232 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 232 204 20 0 chr5 100545769 100545818 -99084332 - L2 LINE L2 -3 3310 3261 1918 84 16 0 chr5 100546649 100546898 -99083252 + AluSg SINE Alu 27 279 -31 837 97 0 0 chr5 100546930 100547043 -99083107 - AluSg/x SINE Alu -11 301 189 304 332 19 68 chr5 100547073 100547278 -99082872 - MER91A DNA MER1_type -1 195 1 26 0 0 0 chr5 100547357 100547383 -99082767 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr5 100549849 100549878 -99080272 + AT_rich Low_complexity Low_complexity 1 29 0 228 67 0 0 chr5 100550212 100550242 -99079908 + (TG)n Simple_repeat Simple_repeat 2 31 0 2036 111 6 41 chr5 100550242 100550549 -99079601 - AluSq SINE Alu -15 298 1 321 353 157 10 chr5 100551149 100551455 -99078695 - L3b LINE CR1 -131 1452 1102 2359 63 0 30 chr5 100551741 100551910 -99078240 + AluY SINE Alu 1 159 -152 309 68 0 0 chr5 100551910 100551954 -99078196 + (CCCTAA)n Simple_repeat Simple_repeat 1 44 0 2359 63 0 30 chr5 100551954 100552085 -99078065 + AluY SINE Alu 159 292 -19 189 254 90 15 chr5 100553044 100553111 -99077039 + MIR3 SINE MIR 6 77 -131 30 45 0 0 chr5 100554005 100554049 -99076101 + AT_rich Low_complexity Low_complexity 1 44 0 621 49 0 0 chr5 100560291 100560372 -99069778 + (CCTA)n Simple_repeat Simple_repeat 2 82 0 2313 86 0 0 chr5 100561734 100562026 -99068124 - AluSg SINE Alu -18 292 1 270 176 0 0 chr5 100564772 100564823 -99065327 + (CA)n Simple_repeat Simple_repeat 2 52 0 248 325 13 0 chr5 100565042 100565119 -99065031 - MER2 DNA MER2_type 0 345 268 861 141 61 94 chr5 100565177 100565390 -99064760 - MER2 DNA MER2_type -138 207 2 217 301 32 11 chr5 100565392 100565485 -99064665 + MIR SINE MIR 72 166 -96 206 268 0 0 chr5 100565581 100565622 -99064528 + L2 LINE L2 3210 3250 -22 696 236 47 0 chr5 100568345 100568493 -99061657 + FRAM SINE Alu 1 154 -22 484 236 187 6 chr5 100568656 100568838 -99061312 + L1MA9 LINE L1 6056 6270 -42 232 300 17 0 chr5 100569253 100569313 -99060837 + L2 LINE L2 3210 3270 -2 21 0 0 0 chr5 100571243 100571264 -99058886 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 100572386 100572415 -99057735 + AT_rich Low_complexity Low_complexity 1 29 0 180 77 0 0 chr5 100572930 100572956 -99057194 + (GAA)n Simple_repeat Simple_repeat 1 26 0 392 311 8 8 chr5 100578728 100578847 -99051303 - MIR SINE MIR -142 120 2 23 54 0 0 chr5 100580562 100580599 -99049551 + AT_rich Low_complexity Low_complexity 1 37 0 1538 155 56 4 chr5 100582204 100582455 -99047695 + AluJb SINE Alu 7 270 -42 577 220 104 17 chr5 100582966 100583139 -99047011 - MER5A DNA MER1_type -1 188 1 215 300 95 26 chr5 100583147 100583337 -99046813 - L2 LINE L2 -556 2758 2556 827 174 11 21 chr5 100583437 100583627 -99046523 + MER53 DNA DNA 1 188 -1 343 221 69 69 chr5 100584923 100585054 -99045096 - L2 LINE L2 -8 3305 3175 348 304 18 27 chr5 100585139 100585251 -99044899 - MIR SINE MIR -80 128 18 2387 92 0 0 chr5 100586328 100586632 -99043518 + AluSq SINE Alu 1 304 -9 2166 125 0 3 chr5 100586952 100587265 -99042885 + AluSx SINE Alu 1 312 0 210 37 0 0 chr5 100588363 100588390 -99041760 + (CA)n Simple_repeat Simple_repeat 2 28 0 27 49 0 0 chr5 100588423 100588464 -99041686 + AT_rich Low_complexity Low_complexity 1 41 0 242 273 109 0 chr5 100589316 100589426 -99040724 + MER113 DNA MER1_type? 399 520 -1 298 194 42 14 chr5 100589487 100589559 -99040591 + MER116 DNA Mariner 2 75 -5 680 208 0 0 chr5 100589901 100590026 -99040124 - FLAM_C SINE Alu -8 125 1 225 207 121 95 chr5 100590831 100590947 -99039203 - MIR SINE MIR -69 139 21 373 256 138 31 chr5 100591429 100591589 -99038561 + MER5B DNA MER1_type 2 178 0 541 309 64 20 chr5 100591845 100592054 -99038096 - MIR SINE MIR -29 233 18 308 343 128 60 chr5 100595194 100595547 -99034603 + L2 LINE L2 2896 3272 0 31 0 0 0 chr5 100599901 100599932 -99030218 + AT_rich Low_complexity Low_complexity 1 31 0 357 93 0 0 chr5 100601102 100601156 -99028994 + (TG)n Simple_repeat Simple_repeat 1 54 0 2122 106 20 13 chr5 100601682 100601984 -99028166 - AluSq SINE Alu -9 304 1 2156 96 3 10 chr5 100603020 100603323 -99026827 - AluSg SINE Alu -8 302 2 21 0 0 0 chr5 100603854 100603875 -99026275 + AT_rich Low_complexity Low_complexity 1 21 0 641 284 102 46 chr5 100604471 100605041 -99025109 - L1ME4a LINE L1 -11 6110 5509 672 273 19 14 chr5 100605131 100605340 -99024810 - L2 LINE L2 -10 3303 3094 21 0 0 0 chr5 100606550 100606571 -99023579 + AT_rich Low_complexity Low_complexity 1 21 0 342 0 0 0 chr5 100608585 100608623 -99021527 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2222 99 3 0 chr5 100608633 100608917 -99021233 - AluSc SINE Alu -24 285 1 447 300 40 40 chr5 100608953 100609153 -99020997 + Charlie8 DNA MER1_type 75 274 -2143 6061 134 83 57 chr5 100609179 100610381 -99019769 - Ricksha_b DNA DNA -13 1241 9 2024 253 63 24 chr5 100611724 100612577 -99017573 - L1ME3 LINE L1 -211 5951 5023 2962 109 74 10 chr5 100612577 100613065 -99017085 + LTR44 LTR ERV1 1 519 0 2024 253 63 24 chr5 100613065 100613366 -99016784 - L1ME3 LINE L1 -1139 5023 4735 2458 116 39 0 chr5 100613562 100613943 -99016207 + L1PA13 LINE L1 5767 6162 -1 21 82 0 0 chr5 100614402 100614451 -99015699 + AT_rich Low_complexity Low_complexity 1 49 0 243 0 0 0 chr5 100614681 100614708 -99015442 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2240 102 0 3 chr5 100614710 100615005 -99015145 - AluSc SINE Alu -15 294 1 240 35 0 0 chr5 100616764 100616793 -99013357 + (A)n Simple_repeat Simple_repeat 1 29 0 336 281 106 45 chr5 100617999 100618164 -99011986 - MIR SINE MIR -25 237 50 374 289 70 0 chr5 100618261 100618375 -99011775 - L2 LINE L2 -1 3312 3191 2232 234 95 10 chr5 100619686 100620606 -99009544 - Charlie2 DNA MER1_type 0 2862 1865 256 234 78 141 chr5 100620610 100620738 -99009412 - Charlie2 DNA MER1_type -2473 309 190 731 229 46 11 chr5 100620747 100620922 -99009228 + MER5A DNA MER1_type 4 184 -5 398 244 163 0 chr5 100620929 100621064 -99009086 - Charlie2 DNA MER1_type -2581 201 45 468 307 16 16 chr5 100621579 100621706 -99008444 - L2 LINE L2 -5 3267 3141 189 349 56 24 chr5 100622054 100622180 -99007970 + L2 LINE L2 2618 2747 -567 277 221 118 0 chr5 100622476 100622544 -99007606 + LTR33 LTR ERVL 18 93 -428 434 308 52 19 chr5 100622711 100622922 -99007228 + LTR33 LTR ERVL 302 519 -2 573 291 8 8 chr5 100625369 100625503 -99004647 + L2 LINE L2 3137 3270 -2 439 306 22 8 chr5 100625529 100625663 -99004487 - MIR SINE MIR -101 161 26 2350 93 0 3 chr5 100625748 100626058 -99004092 + AluSc SINE Alu 1 309 0 183 162 0 0 chr5 100626871 100626908 -99003242 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 2204 110 3 0 chr5 100627618 100627910 -99002240 + AluSx SINE Alu 1 293 -19 365 172 0 0 chr5 100628687 100628751 -99001399 + MER5B DNA MER1_type 115 178 0 636 224 147 0 chr5 100628760 100628916 -99001234 - MER5A DNA MER1_type -1 188 10 640 277 0 0 chr5 100628933 100629081 -99001069 - MER5A DNA MER1_type 0 189 42 222 271 21 0 chr5 100629257 100629305 -99000845 - L2 LINE L2 -504 2810 2762 253 229 84 48 chr5 100629474 100629557 -99000593 - MIR SINE MIR -71 191 106 22 0 0 0 chr5 100630197 100630219 -98999931 + AT_rich Low_complexity Low_complexity 1 22 0 419 169 18 32 chr5 100630316 100630608 -98999542 + (TTATA)n Simple_repeat Simple_repeat 1 287 0 1117 271 330 18 chr5 100631166 100631999 -98998151 + L2 LINE L2 1962 3048 -265 1309 135 18 36 chr5 100632001 100632223 -98997927 - AluSx SINE Alu -17 295 78 555 106 24 0 chr5 100632324 100632409 -98997741 - AluSx SINE Alu -226 87 1 303 235 15 0 chr5 100632464 100632532 -98997618 + L2 LINE L2 3245 3313 0 686 301 83 62 chr5 100632669 100633104 -98997046 - L2 LINE L2 -1 3312 2869 663 300 49 5 chr5 100633129 100633352 -98996798 + MIR SINE MIR 1 233 -29 1570 142 112 0 chr5 100633352 100633612 -98996538 - MLT1A1 LTR MaLR 0 365 77 25 0 0 0 chr5 100633972 100633997 -98996153 + AT_rich Low_complexity Low_complexity 1 25 0 647 214 41 0 chr5 100634998 100635143 -98995007 + L1MEc LINE L1 45 195 -6201 180 293 0 85 chr5 100635238 100635320 -98994830 + MIR3 SINE MIR 5 79 -129 513 323 32 48 chr5 100635445 100635693 -98994457 - L1MEd LINE L1 -4934 1136 893 198 407 12 0 chr5 100635784 100635870 -98994280 + MIR SINE MIR 157 243 -19 2079 110 3 7 chr5 100635879 100636180 -98993970 - AluSx SINE Alu -12 300 1 305 226 52 26 chr5 100636454 100636569 -98993581 - L1MEd LINE L1 -5170 900 783 243 0 0 0 chr5 100636590 100636617 -98993533 + (TC)n Simple_repeat Simple_repeat 2 28 0 246 276 146 24 chr5 100637236 100637359 -98992791 - L1MEd LINE L1 -5860 210 73 1352 279 61 64 chr5 100637418 100638077 -98992073 + L2 LINE L2 1820 2476 -838 21 0 0 0 chr5 100638378 100638399 -98991751 + AT_rich Low_complexity Low_complexity 1 21 0 1310 91 147 0 chr5 100638705 100638903 -98991247 + MER30 DNA MER1_type 3 229 -1 597 64 0 0 chr5 100639367 100639445 -98990705 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 218 232 36 18 chr5 100641476 100641532 -98988618 + L2 LINE L2 3253 3309 -4 1888 151 0 43 chr5 100642401 100642726 -98987424 + AluJo SINE Alu 2 312 0 1297 112 89 22 chr5 100642815 100643039 -98987111 - Tigger3(Golem) DNA MER2_type -41 2988 2750 1047 32 0 0 chr5 100643148 100643272 -98986878 - L1PA7 LINE L1 -280 5874 5751 318 148 19 0 chr5 100644522 100644576 -98985574 - MLT1G1 LTR MaLR -533 62 8 565 159 152 0 chr5 100644594 100644732 -98985418 - MER5C DNA MER1_type 0 324 166 497 113 113 31 chr5 100645349 100645446 -98984704 + Tigger4(Zombi) DNA MER2_type 2626 2730 -1 202 200 18 36 chr5 100646023 100646078 -98984072 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 1929 146 21 0 chr5 100646214 100646502 -98983648 + AluSx SINE Alu 1 294 -18 593 140 49 5 chr5 100646525 100646729 -98983421 + L1MA4A LINE L1 6007 6280 -23 822 219 6 6 chr5 100646736 100646900 -98983250 + U1 snRNA snRNA 1 164 -1 279 0 0 0 chr5 100647759 100647790 -98982360 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1524 167 58 0 chr5 100647793 100648051 -98982099 - AluJo SINE Alu -31 281 9 21 0 0 0 chr5 100648066 100648087 -98982063 + AT_rich Low_complexity Low_complexity 1 21 0 2015 119 3 7 chr5 100648423 100648709 -98981441 - AluSx SINE Alu -23 289 5 285 77 0 0 chr5 100648845 100648884 -98981266 + MADE1 DNA Mariner 2 40 -40 21 0 0 0 chr5 100649733 100649754 -98980396 + AT_rich Low_complexity Low_complexity 1 21 0 865 218 130 35 chr5 100649868 100650129 -98980021 - L2 LINE L2 0 3313 3028 2440 227 142 48 chr5 100650140 100650951 -98979199 - L2 LINE L2 -544 2770 1884 378 162 0 44 chr5 100650951 100651019 -98979131 - AluS SINE Alu -238 65 1 432 257 151 11 chr5 100651153 100651332 -98978818 - L2 LINE L2 -1458 1856 1653 2302 85 6 22 chr5 100651660 100651978 -98978172 - AluSp SINE Alu 0 313 1 2040 112 3 27 chr5 100655628 100655922 -98974228 + AluSx SINE Alu 1 287 -25 24 85 0 0 chr5 100656161 100656220 -98973930 + AT_rich Low_complexity Low_complexity 1 59 0 1518 208 131 8 chr5 100656592 100657032 -98973118 - MLT2B2 LTR ERVL 0 554 1 2299 86 0 49 chr5 100658306 100658631 -98971519 - AluSq SINE Alu -4 309 1 1812 174 7 0 chr5 100658659 100658953 -98971197 + AluJo SINE Alu 1 296 -16 290 261 23 11 chr5 100660070 100660158 -98969992 + MIR SINE MIR 172 260 -2 575 265 94 6 chr5 100661609 100661779 -98968371 + MIR SINE MIR 48 232 -30 22416 138 23 25 chr5 100662650 100669561 -98960589 + L1MA3 LINE L1 17 6926 -798 1722 157 6 72 chr5 100669561 100669880 -98960270 + AluJb SINE Alu 1 298 -14 22416 138 23 25 chr5 100669880 100670679 -98959471 + L1MA3 LINE L1 6926 7724 0 704 145 22 72 chr5 100670839 100670977 -98959173 + FLAM_A SINE Alu 2 132 -1 25 0 0 0 chr5 100671564 100671589 -98958561 + AT_rich Low_complexity Low_complexity 1 25 0 527 65 0 26 chr5 100671623 100671700 -98958450 + L1MA1 LINE L1 5776 5850 -452 1399 189 0 0 chr5 100671715 100671948 -98958202 - AluJo SINE Alu -79 233 1 180 320 103 0 chr5 100672143 100672221 -98957929 - MIR SINE MIR -63 145 60 1813 122 0 0 chr5 100675119 100675356 -98954794 - AluSx SINE Alu -75 237 1 2338 93 7 3 chr5 100676136 100676446 -98953704 - AluSx SINE Alu 0 312 2 376 242 180 31 chr5 100676686 100676847 -98953303 - MIR3 SINE MIR -4 204 20 2705 73 18 42 chr5 100677345 100677383 -98952767 + THE1C LTR MaLR 1 38 -337 2357 93 0 3 chr5 100677383 100677683 -98952467 - AluSx SINE Alu -11 301 3 2705 73 18 42 chr5 100677683 100678028 -98952122 + THE1C LTR MaLR 38 375 0 1998 157 0 0 chr5 100678482 100678782 -98951368 + AluJb SINE Alu 1 300 -12 1743 146 25 54 chr5 100679050 100679365 -98950785 + AluJo SINE Alu 1 306 -6 1953 151 0 0 chr5 100679425 100679709 -98950441 - AluJb SINE Alu -28 284 1 243 103 0 0 chr5 100682592 100682631 -98947519 + (CA)n Simple_repeat Simple_repeat 2 40 0 642 239 149 50 chr5 100683563 100683785 -98946365 - MIR SINE MIR -17 245 2 1285 168 17 4 chr5 100683833 100684065 -98946085 - MER46A DNA MER2_type 0 236 2 203 286 79 24 chr5 100686269 100686395 -98943755 + L2 LINE L2 3173 3305 -8 2257 121 0 6 chr5 100686999 100687313 -98942837 - AluSx SINE Alu 0 312 1 2095 115 3 0 chr5 100688431 100688718 -98941432 + AluSq SINE Alu 2 289 -24 23 0 0 0 chr5 100689009 100689032 -98941118 + AT_rich Low_complexity Low_complexity 1 23 0 731 238 218 0 chr5 100689413 100689619 -98940531 - MIR SINE MIR 0 262 12 208 333 88 44 chr5 100690571 100690685 -98939465 + L2 LINE L2 3119 3237 -35 319 347 20 0 chr5 100690688 100690835 -98939315 - MER117 DNA MER1_type -47 150 1 441 271 133 12 chr5 100693201 100693367 -98936783 + MIR SINE MIR 20 205 -57 430 261 181 22 chr5 100693416 100693554 -98936596 - MER5A DNA MER1_type -7 182 23 619 315 168 46 chr5 100693710 100694744 -98935406 - L2 LINE L2 -399 2915 1756 2449 72 7 3 chr5 100695916 100696221 -98933929 + AluY SINE Alu 5 310 -1 197 358 98 24 chr5 100696595 100696718 -98933432 + L3 LINE CR1 1120 1251 -326 406 285 37 49 chr5 100696728 100696974 -98933176 - MLT1K LTR MaLR -16 572 330 225 265 29 0 chr5 100697086 100697154 -98932996 - MLT1K LTR MaLR -514 74 5 876 343 35 0 chr5 100697159 100697477 -98932673 + L3 LINE CR1 1246 1574 -3 33 0 0 0 chr5 100697872 100697905 -98932245 + AT_rich Low_complexity Low_complexity 1 33 0 21 57 0 0 chr5 100698019 100698054 -98932096 + AT_rich Low_complexity Low_complexity 1 35 0 287 360 30 0 chr5 100699163 100699263 -98930887 - L2 LINE L2 -540 2774 2672 272 269 160 32 chr5 100700174 100700330 -98929820 + L3 LINE CR1 707 882 -695 770 265 123 84 chr5 100701070 100701583 -98928567 + HAL1 LINE L1 845 1377 -1130 322 325 149 0 chr5 100701768 100701962 -98928188 + L1M4 LINE L1 3185 3407 -2739 252 175 32 16 chr5 100701962 100702025 -98928125 + L1MD3 LINE L1 7921 7984 -11 280 320 109 75 chr5 100702105 100702546 -98927604 + L2 LINE L2 2813 3268 -4 201 39 0 0 chr5 100702970 100702996 -98927154 + (TTTTTG)n Simple_repeat Simple_repeat 1 26 0 210 118 0 0 chr5 100703991 100704025 -98926125 + (GA)n Simple_repeat Simple_repeat 2 35 0 22 70 0 0 chr5 100704115 100704158 -98925992 + AT_rich Low_complexity Low_complexity 1 43 0 210 191 0 0 chr5 100706139 100706186 -98923964 + A-rich Low_complexity Low_complexity 1 47 0 705 177 133 13 chr5 100707939 100708097 -98922053 + MER69A DNA AcHobo 1 177 0 253 240 93 93 chr5 100708142 100708325 -98921825 + MER5A DNA MER1_type 7 189 0 837 194 8 0 chr5 100708498 100708632 -98921518 - AluJo SINE Alu -176 136 2 196 250 0 0 chr5 100709087 100709127 -98921023 + MIR SINE MIR 80 119 -143 766 271 39 28 chr5 100709154 100709409 -98920741 + MIR SINE MIR 2 259 -3 1936 188 96 98 chr5 100709449 100709991 -98920159 - MLT1F LTR MaLR 0 542 2 180 0 0 0 chr5 100710031 100710051 -98920099 + (T)n Simple_repeat Simple_repeat 1 20 0 274 290 89 83 chr5 100711662 100711831 -98918319 - L2 LINE L2 -86 3186 3017 2191 101 3 25 chr5 100712106 100712423 -98917727 + AluSp SINE Alu 1 310 -3 4177 87 15 32 chr5 100712682 100713271 -98916879 + L1PB2 LINE L1 5572 6150 -1 1966 126 14 0 chr5 100713301 100713586 -98916564 + AluJo SINE Alu 5 293 -19 222 326 32 32 chr5 100714009 100714104 -98916046 - MIR3 SINE MIR -7 201 107 823 231 148 0 chr5 100714736 100714939 -98915211 - MIR SINE MIR -19 243 11 424 292 79 22 chr5 100718236 100718414 -98911736 - MIR SINE MIR 0 262 75 29 0 0 0 chr5 100718771 100718800 -98911350 + AT_rich Low_complexity Low_complexity 1 29 0 2618 61 0 0 chr5 100718855 100719166 -98910984 - AluY SINE Alu 0 311 1 486 276 66 56 chr5 100719288 100719484 -98910666 + MIR SINE MIR 51 248 -14 468 307 106 21 chr5 100719724 100719913 -98910237 + MIR SINE MIR 20 224 -38 890 149 156 0 chr5 100721346 100721500 -98908650 - MER45A DNA AcHobo 0 178 1 808 191 0 6 chr5 100721530 100721692 -98908458 + MER96B DNA MER1_type? 10 170 -247 26 0 0 0 chr5 100721911 100721937 -98908213 + AT_rich Low_complexity Low_complexity 1 26 0 558 148 99 10 chr5 100721937 100722038 -98908112 - FLAM_A SINE Alu -6 136 27 1828 166 3 0 chr5 100722998 100723294 -98906856 - AluSx SINE Alu -15 297 1 789 200 23 0 chr5 100724116 100724246 -98905904 - FLAM_A SINE Alu 0 133 1 1547 138 22 3 chr5 100724711 100725152 -98904998 - LTR54 LTR ERV1 0 510 2 544 291 77 42 chr5 100725355 100725639 -98904511 - L1MC4a LINE L1 -152 5969 5674 955 133 0 15 chr5 100729215 100729350 -98900800 - FLAM_C SINE Alu 0 133 1 25 0 0 0 chr5 100729808 100729833 -98900317 + AT_rich Low_complexity Low_complexity 1 25 0 227 319 28 0 chr5 100730537 100730609 -98899541 - Charlie4 DNA MER1_type -4 1957 1884 952 201 29 6 chr5 100731506 100731680 -98898470 + MER5B DNA MER1_type 1 178 0 384 276 86 20 chr5 100731950 100732102 -98898048 + MER5A DNA MER1_type 28 189 0 2407 128 19 30 chr5 100733562 100733930 -98896220 - THE1B LTR MaLR 0 364 1 246 281 21 42 chr5 100734359 100734455 -98895695 + MARNA DNA Mariner 128 221 -365 950 262 130 65 chr5 100734629 100735137 -98895013 - MLT1K LTR MaLR -4 584 44 180 281 35 35 chr5 100735148 100735205 -98894945 + L3b LINE CR1 1416 1472 -111 587 268 115 21 chr5 100735300 100735535 -98894615 + MARNA DNA Mariner 322 578 -8 309 114 57 11 chr5 100736614 100736676 -98893474 + (TA)n Simple_repeat Simple_repeat 1 70 -22 2279 115 56 14 chr5 100736676 100737033 -98893117 + THE1C LTR MaLR 4 375 0 309 114 57 11 chr5 100737033 100737058 -98893092 + (TA)n Simple_repeat Simple_repeat 70 92 0 1906 180 39 65 chr5 100737063 100737681 -98892469 + pTR5 LTR ERV1 744 1345 -1093 3672 119 276 23 chr5 100737696 100738352 -98891798 + LTR12 LTR ERV1 5 826 0 303 312 126 47 chr5 100739112 100739159 -98890991 + L1MC4a LINE L1 5446 5488 -2320 2295 75 0 0 chr5 100739159 100739438 -98890712 + AluY SINE Alu 18 296 -15 303 312 126 47 chr5 100739438 100739708 -98890442 + L1MC4a LINE L1 5488 5804 -2004 1104 142 206 53 chr5 100739708 100739989 -98890161 + MER33 DNA MER1_type 1 324 0 303 312 126 47 chr5 100739989 100740074 -98890076 + L1MC4a LINE L1 5804 5881 -1927 420 228 18 53 chr5 100740929 100741043 -98889107 - MER34 LTR ERV1 0 542 433 270 259 0 0 chr5 100741124 100741178 -98888972 - MER34 LTR ERV1 -124 418 365 275 136 0 0 chr5 100741437 100741481 -98888669 + MADE1 DNA Mariner 1 44 -36 840 84 0 76 chr5 100741517 100741648 -98888502 - L1MA3 LINE L1 0 6305 6185 705 154 146 0 chr5 100741784 100741907 -98888243 - FAM SINE Alu -44 141 1 288 0 0 0 chr5 100742204 100742236 -98887914 + (CA)n Simple_repeat Simple_repeat 1 32 0 198 0 0 0 chr5 100742236 100742258 -98887892 + (A)n Simple_repeat Simple_repeat 1 22 0 3079 125 9 2 chr5 100742784 100743215 -98886935 - MER57B LTR ERV1 0 434 1 2465 116 165 54 chr5 100744236 100744867 -98885283 + Tigger3(Golem) DNA MER2_type 1 3029 0 1841 174 27 0 chr5 100745223 100745522 -98884628 - AluJb SINE Alu -5 307 1 689 221 32 17 chr5 100746406 100746578 -98883572 - MIR SINE MIR -25 237 63 545 264 157 6 chr5 100746632 100746791 -98883359 - MER5A DNA MER1_type 0 189 7 425 288 104 34 chr5 100747357 100747557 -98882593 - MIR SINE MIR -32 230 20 339 298 0 11 chr5 100747601 100747695 -98882455 + MIR SINE MIR 34 126 -136 260 330 37 69 chr5 100747720 100747908 -98882242 - L2 LINE L2 -218 3054 2873 201 309 95 48 chr5 100747918 100748044 -98882106 + L2 LINE L2 3182 3313 0 1452 193 68 34 chr5 100748112 100748434 -98881716 - MLT1A2 LTR MaLR -37 337 5 2457 50 0 3 chr5 100748504 100748803 -98881347 - AluY SINE Alu -10 301 4 4324 181 57 21 chr5 100749119 100749915 -98880235 - LTR1B LTR ERV1 0 826 3 1017 277 127 16 chr5 100750927 100751313 -98878837 + L2 LINE L2 2883 3311 -2 2644 128 10 12 chr5 100751389 100751702 -98878448 - MER57A LTR ERV1 -4 399 86 2516 144 36 0 chr5 100751702 100752091 -98878059 + MER57A LTR ERV1 1 403 0 2644 128 10 12 chr5 100752091 100752177 -98877973 - MER57A LTR ERV1 -317 86 1 1991 146 0 16 chr5 100752626 100752941 -98877209 + AluJo SINE Alu 1 310 -2 484 281 0 0 chr5 100753084 100753198 -98876952 - MER5B DNA MER1_type 0 178 65 442 257 46 105 chr5 100753315 100753596 -98876554 + L1MEc LINE L1 812 1009 -5196 1727 176 10 17 chr5 100753596 100753897 -98876253 - AluJb SINE Alu -1 311 13 442 257 46 105 chr5 100753897 100753988 -98876162 + L1MEc LINE L1 1009 1104 -5101 2278 157 82 3 chr5 100753994 100754382 -98875768 - MSTB LTR MaLR -7 419 1 330 26 0 0 chr5 100755767 100755806 -98874344 + (T)n Simple_repeat Simple_repeat 1 39 0 201 129 0 0 chr5 100757770 100757801 -98872349 + (C)n Simple_repeat Simple_repeat 1 31 0 2406 83 0 3 chr5 100758366 100758666 -98871484 - AluSq SINE Alu -14 299 1 257 263 13 0 chr5 100759691 100759767 -98870383 + MER103 DNA DNA 84 160 -6 363 270 51 56 chr5 100761362 100761540 -98868610 + Charlie8 DNA MER1_type 2 178 -2239 272 309 171 8 chr5 100761799 100762051 -98868099 + L1MEd LINE L1 359 651 -5468 365 284 21 7 chr5 100762053 100762194 -98867956 + L1MEd LINE L1 2671 2813 -3316 15622 147 53 7 chr5 100762217 100765429 -98864721 + L1PB1 LINE L1 1 3360 -3502 303 254 0 0 chr5 100766305 100766443 -98863707 + GA-rich Low_complexity Low_complexity 1 138 0 11182 179 17 15 chr5 100768168 100771418 -98858732 + L1PB1 LINE L1 3343 6592 -275 1159 177 0 0 chr5 100772805 100772980 -98857170 + FAM SINE Alu 1 175 0 1771 197 82 25 chr5 100774239 100774717 -98855433 - MLT1D LTR MaLR 0 505 1 203 318 30 0 chr5 100775310 100775376 -98854774 + L2 LINE L2 3245 3312 -1 470 207 45 18 chr5 100775540 100775651 -98854499 + MER81 DNA DNA 1 114 0 973 250 4 13 chr5 100776123 100776359 -98853791 + Charlie1a DNA MER1_type 17 250 -1205 411 176 22 11 chr5 100776401 100776492 -98853658 - L1M4 LINE L1 -6113 429 338 1166 204 35 11 chr5 100776511 100776771 -98853379 - L1M4 LINE L1 -6275 267 2 2164 115 0 7 chr5 100776845 100777149 -98853001 - AluSq SINE Alu -11 302 1 561 68 0 0 chr5 100777866 100777940 -98852210 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 221 232 36 18 chr5 100779971 100780027 -98850123 + L2 LINE L2 3253 3309 -4 1899 151 0 46 chr5 100780896 100781221 -98848929 + AluJo SINE Alu 2 311 -1 3272 102 124 16 chr5 100781310 100781949 -98848201 - Tigger3(Golem) DNA MER2_type -41 2988 2281 363 167 0 0 chr5 100781946 100782006 -98848144 - Tigger3(Golem) DNA MER2_type -2921 108 49 * 196 271 0 71 chr5 100782548 100782618 -98847532 + MIR3 SINE MIR 128 192 -16 401 248 47 23 chr5 100783174 100783303 -98846847 - MIR SINE MIR -32 230 99 337 351 40 0 chr5 100783622 100783770 -98846380 + Tigger8 DNA MER2_type 22 175 -491 351 301 67 16 chr5 100783935 100784128 -98846022 + Tigger8 DNA MER2_type 408 610 -56 705 194 6 35 chr5 100785009 100785179 -98844971 + MER20 DNA MER1_type 31 195 -24 222 189 0 0 chr5 100786232 100786269 -98843881 + polypurine Low_complexity Low_complexity 2 38 0 211 308 0 13 chr5 100787853 100787931 -98842219 + (TA)n Simple_repeat Simple_repeat 2 78 0 21 36 0 0 chr5 100788110 100788138 -98842012 + AT_rich Low_complexity Low_complexity 1 28 0 180 97 0 0 chr5 100788426 100788457 -98841693 + (A)n Simple_repeat Simple_repeat 1 31 0 2100 131 27 0 chr5 100790943 100791241 -98838909 - AluSx SINE Alu -6 306 1 446 0 0 18 chr5 100792174 100792229 -98837921 + (CA)n Simple_repeat Simple_repeat 1 54 0 186 43 0 0 chr5 100792228 100792251 -98837899 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 46 19 0 0 chr5 100792697 100792750 -98837400 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr5 100793542 100793563 -98836587 + AT_rich Low_complexity Low_complexity 1 21 0 2473 82 0 0 chr5 100795473 100795778 -98834372 - AluY SINE Alu -6 305 1 449 231 279 43 chr5 100796666 100796874 -98833276 - MIR SINE MIR -5 257 1 382 273 64 86 chr5 100796914 100797181 -98832969 + L1ME4a LINE L1 5704 5964 -157 190 385 53 41 chr5 100798512 100798681 -98831469 - L2 LINE L2 0 3272 3102 206 244 0 122 chr5 100798748 100798830 -98831320 - L3 LINE CR1 -14 1563 1492 4059 138 45 9 chr5 100798934 100799296 -98830854 + L1MB2 LINE L1 5443 5791 -380 2239 131 0 0 chr5 100799296 100799608 -98830542 + AluSx SINE Alu 1 312 0 4059 138 45 9 chr5 100799608 100799942 -98830208 + L1MB2 LINE L1 5791 6164 -7 2139 32 0 0 chr5 100799961 100800213 -98829937 + L1PA3 LINE L1 5904 6155 0 2057 139 10 0 chr5 100800621 100800930 -98829220 + AluSx SINE Alu 1 312 0 380 239 72 75 chr5 100801470 100801776 -98828374 - L1MC4 LINE L1 0 8042 7738 2320 91 3 3 chr5 100802031 100802329 -98827821 - AluY SINE Alu -13 298 1 28 0 0 0 chr5 100803446 100803474 -98826676 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 100803691 100803717 -98826433 + AT_rich Low_complexity Low_complexity 1 26 0 1636 219 114 17 chr5 100804704 100805125 -98825025 + MLT1C LTR MaLR 6 467 0 1286 255 71 15 chr5 100805171 100805950 -98824200 + L1ME LINE L1 4899 5761 -409 500 297 162 5 chr5 100806319 100806504 -98823646 + MIR SINE MIR 31 244 -18 253 274 16 0 chr5 100806530 100806592 -98823558 - L2 LINE L2 -2 3270 3208 552 43 0 0 chr5 100806880 100806949 -98823201 + L1PA5 LINE L1 6081 6149 -5 185 328 0 0 chr5 100806955 100807013 -98823137 - MIR3 SINE MIR -41 167 110 21 36 0 0 chr5 100808217 100808245 -98821905 + AT_rich Low_complexity Low_complexity 1 28 0 539 301 37 105 chr5 100809367 100809719 -98820431 - L2 LINE L2 -3 3269 2942 310 266 168 0 chr5 100810233 100810346 -98819804 + L2 LINE L2 3174 3305 -8 21 0 0 0 chr5 100810420 100810441 -98819709 + AT_rich Low_complexity Low_complexity 1 21 0 1778 162 10 32 chr5 100811320 100811634 -98818516 + AluJo SINE Alu 1 307 -5 223 191 24 0 chr5 100812636 100812678 -98817472 + GA-rich Low_complexity Low_complexity 2 44 0 22 56 0 0 chr5 100812869 100812905 -98817245 + AT_rich Low_complexity Low_complexity 1 36 0 552 284 52 48 chr5 100813567 100813796 -98816354 - L2 LINE L2 -187 3085 2856 2380 53 42 0 chr5 100813902 100814187 -98815963 + AluY SINE Alu 5 301 -10 2165 141 0 3 chr5 100814198 100814511 -98815639 + AluJo SINE Alu 1 312 0 822 253 65 4 chr5 100815331 100815576 -98814574 - MIR SINE MIR 0 262 3 21 0 0 0 chr5 100816460 100816481 -98813669 + AT_rich Low_complexity Low_complexity 1 21 0 35 78 0 0 chr5 100816781 100816858 -98813292 + AT_rich Low_complexity Low_complexity 1 77 0 2260 117 3 0 chr5 100818315 100818615 -98811535 - AluSg SINE Alu -7 303 3 226 323 0 0 chr5 100818662 100818727 -98811423 - Charlie8 DNA MER1_type -992 1425 1361 229 267 50 0 chr5 100820210 100820270 -98809880 + L2 LINE L2 3247 3309 -4 3371 257 108 38 chr5 100820401 100820684 -98809466 + L2 LINE L2 1597 1859 -1455 2195 99 3 0 chr5 100820684 100820992 -98809158 - AluSq SINE Alu 0 309 1 3371 257 108 38 chr5 100820992 100821954 -98808196 + L2 LINE L2 1859 2931 -383 3293 151 49 0 chr5 100821987 100822517 -98807633 - MER68 LTR ERV1 -6 556 1 830 298 73 30 chr5 100822517 100822886 -98807264 + L2 LINE L2 2929 3313 0 186 196 109 0 chr5 100823337 100823383 -98806767 + L2 LINE L2 2319 2369 -945 342 352 111 34 chr5 100823530 100823908 -98806242 + L2 LINE L2 2554 2960 -354 218 333 160 20 chr5 100825619 100825769 -98804381 - L3 LINE CR1 -1 1576 1406 21 36 0 0 chr5 100826110 100826138 -98804012 + AT_rich Low_complexity Low_complexity 1 28 0 30 27 0 0 chr5 100826636 100826673 -98803477 + AT_rich Low_complexity Low_complexity 1 37 0 1732 166 27 14 chr5 100827028 100827323 -98802827 + AluJo SINE Alu 1 299 -13 2121 128 0 0 chr5 100827734 100828022 -98802128 - AluSc SINE Alu -21 288 1 427 270 70 0 chr5 100828549 100828664 -98801486 + MIR SINE MIR 60 182 -80 3023 88 3 10 chr5 100831069 100831934 -98798216 + L1PB1 LINE L1 5181 6147 -4 822 220 122 14 chr5 100832100 100832314 -98797836 + MIR SINE MIR 26 262 0 512 91 80 4 chr5 100833405 100833632 -98796518 + (TA)n Simple_repeat Simple_repeat 1 244 0 280 302 62 21 chr5 100833635 100833731 -98796419 - MIR SINE MIR -148 114 15 217 225 0 0 chr5 100833808 100833848 -98796302 + (CA)n Simple_repeat Simple_repeat 1 40 0 1282 161 53 86 chr5 100833949 100834241 -98795909 + AluJo SINE Alu 13 296 -16 1951 106 7 7 chr5 100834241 100834524 -98795626 + AluSg SINE Alu 28 310 0 1282 161 53 86 chr5 100834524 100834535 -98795615 + AluJo SINE Alu 296 306 -6 215 229 49 16 chr5 100834673 100834734 -98795416 + GA-rich Low_complexity Low_complexity 2 64 0 207 275 25 38 chr5 100834841 100834921 -98795229 - L2 LINE L2 -188 3084 3006 728 168 7 14 chr5 100835763 100835906 -98794244 + MER3 DNA MER1_type 52 193 -16 25 31 0 0 chr5 100837479 100837511 -98792639 + AT_rich Low_complexity Low_complexity 1 32 0 4870 61 41 5 chr5 100838122 100838759 -98791391 + PABL_A LTR ERV1 1 660 0 2120 127 0 3 chr5 100839108 100839408 -98790742 + AluSx SINE Alu 3 301 -11 287 293 103 60 chr5 100839654 100839770 -98790380 + MIR3 SINE MIR 15 135 -73 24 0 0 0 chr5 100839850 100839874 -98790276 + AT_rich Low_complexity Low_complexity 1 24 0 640 323 52 12 chr5 100840620 100840871 -98789279 + MIR SINE MIR 2 262 0 23 0 0 0 chr5 100841914 100841937 -98788213 + AT_rich Low_complexity Low_complexity 1 23 0 906 304 59 4 chr5 100844027 100844300 -98785850 + MER115 DNA AcHobo 29 316 -377 422 303 65 49 chr5 100844770 100844955 -98785195 - MIR SINE MIR -55 207 20 302 252 304 0 chr5 100845220 100845355 -98784795 + MER5A DNA MER1_type 14 189 0 26 0 0 0 chr5 100846087 100846113 -98784037 + AT_rich Low_complexity Low_complexity 1 26 0 956 199 114 27 chr5 100846992 100847289 -98782861 + MER5C DNA MER1_type 2 324 0 202 313 70 79 chr5 100847307 100847534 -98782616 - L2 LINE L2 -693 2621 2397 348 248 204 9 chr5 100847678 100847791 -98782359 + MIR SINE MIR 52 186 -76 450 315 182 48 chr5 100847794 100848644 -98781506 - L2 LINE L2 -1029 2285 1322 1422 165 4 4 chr5 100849105 100849342 -98780808 + MER2 DNA MER2_type 1 237 -108 230 327 136 9 chr5 100850065 100850279 -98779871 + L1MEc LINE L1 464 704 -6121 228 309 32 32 chr5 100850414 100850602 -98779548 + L1MEc LINE L1 936 1123 -5702 1883 255 115 44 chr5 100850808 100851467 -98778683 + L1MEc LINE L1 1044 1654 -4990 351 0 0 0 chr5 100851467 100851506 -98778644 + (CA)n Simple_repeat Simple_repeat 2 40 0 1883 255 115 44 chr5 100851506 100852734 -98777416 + L1MEc LINE L1 1654 3316 -3328 192 77 0 0 chr5 100852734 100852760 -98777390 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 1883 255 115 44 chr5 100852760 100853155 -98776995 + L1MEc LINE L1 3316 3681 -2963 807 183 0 0 chr5 100855422 100855553 -98774597 + FLAM_C SINE Alu 2 132 -1 244 231 51 39 chr5 100856227 100856305 -98773845 - MIR SINE MIR -66 196 118 405 0 0 0 chr5 100856370 100856415 -98773735 + (CA)n Simple_repeat Simple_repeat 2 46 0 1656 199 0 11 chr5 100856423 100856709 -98773441 - AluJo SINE Alu -29 283 1 21 89 0 0 chr5 100857354 100857410 -98772740 + AT_rich Low_complexity Low_complexity 1 56 0 334 150 50 38 chr5 100857716 100857796 -98772354 - L1MA4 LINE L1 -194 6106 6026 1154 116 26 0 chr5 100857796 100857981 -98772169 + L1MA4 LINE L1 6101 6295 -5 378 232 209 8 chr5 100858200 100858463 -98771687 + L1ME4a LINE L1 5581 5896 -225 34 42 0 0 chr5 100858549 100858597 -98771553 + AT_rich Low_complexity Low_complexity 1 48 0 1996 162 19 36 chr5 100858743 100859163 -98770987 + L1MA6 LINE L1 5883 6295 -5 877 291 58 38 chr5 100859210 100859656 -98770494 + MLT1H LTR MaLR 83 537 -12 704 102 0 0 chr5 100860167 100860265 -98769885 + HY3 scRNA scRNA 2 99 -2 243 125 0 0 chr5 100860266 100860306 -98769844 + (A)n Simple_repeat Simple_repeat 1 40 0 768 198 176 5 chr5 100860312 100860499 -98769651 + MIR SINE MIR 31 249 -13 285 232 205 21 chr5 100860536 100860654 -98769496 - MIR SINE MIR -54 154 28 749 148 111 26 chr5 100861130 100861319 -98768831 - MER2 DNA MER2_type -137 208 4 23 0 0 0 chr5 100861529 100861552 -98768598 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 100862631 100862653 -98767497 + AT_rich Low_complexity Low_complexity 1 22 0 2433 97 3 0 chr5 100862686 100862996 -98767154 + AluSx SINE Alu 1 311 -1 22 35 0 0 chr5 100863522 100863551 -98766599 + AT_rich Low_complexity Low_complexity 1 29 0 1313 185 97 27 chr5 100863762 100863838 -98766312 + MLT1D LTR MaLR 107 176 -329 2031 101 11 0 chr5 100863838 100864106 -98766044 + AluSc SINE Alu 39 309 0 1313 185 97 27 chr5 100864106 100864402 -98765748 + MLT1D LTR MaLR 176 505 0 1580 241 128 36 chr5 100864941 100865071 -98765079 + L1ME1 LINE L1 331 448 -5632 1898 179 54 54 chr5 100865071 100865574 -98764576 - MLT1D LTR MaLR -2 503 1 1580 241 128 36 chr5 100865574 100866399 -98763751 + L1ME1 LINE L1 448 1339 -4741 1367 135 0 5 chr5 100866399 100866606 -98763544 - AluSg/x SINE Alu -23 289 84 1665 211 113 59 chr5 100866736 100867285 -98762865 + L1ME1 LINE L1 5188 5777 -323 2193 118 0 13 chr5 100867285 100867591 -98762559 - AluSx SINE Alu -10 302 1 1665 211 113 59 chr5 100867591 100867681 -98762469 + L1ME1 LINE L1 5777 5861 -239 2681 36 0 0 chr5 100867850 100868159 -98761991 + AluY SINE Alu 1 309 -2 1017 116 0 0 chr5 100868159 100868314 -98761836 + (TA)n Simple_repeat Simple_repeat 1 155 0 189 0 0 0 chr5 100868313 100868334 -98761816 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 1931 177 81 15 chr5 100870489 100870969 -98759181 + Charlie1b DNA MER1_type 6 517 -6 1321 233 0 37 chr5 100871348 100871377 -98758773 + MLT1B LTR MaLR 28 57 -333 2348 48 3 48 chr5 100871377 100871686 -98758464 + AluY SINE Alu 2 296 -15 1321 233 0 37 chr5 100871686 100872033 -98758117 + MLT1B LTR MaLR 57 390 0 187 394 0 0 chr5 100872802 100872868 -98757282 + L2 LINE L2 3188 3253 -19 180 111 0 0 chr5 100872992 100873019 -98757131 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 196 235 0 98 chr5 100873119 100873170 -98756980 - L2 LINE L2 -16 3256 3211 1759 129 52 89 chr5 100873368 100873717 -98756433 - MER1B DNA MER1_type -1 336 1 236 287 117 21 chr5 100873981 100874075 -98756075 - MIR SINE MIR -159 103 1 2346 96 0 0 chr5 100874516 100874819 -98755331 + AluSx SINE Alu 1 303 -9 23 0 0 0 chr5 100875195 100875218 -98754932 + AT_rich Low_complexity Low_complexity 1 23 0 3864 127 16 111 chr5 100877107 100877509 -98752641 + MER4D LTR ERV1 1 439 -464 1761 157 13 46 chr5 100877509 100877815 -98752335 - AluJo SINE Alu -11 301 6 3864 127 16 111 chr5 100877815 100878076 -98752074 + MER4D LTR ERV1 439 580 -323 2113 124 3 10 chr5 100878076 100878375 -98751775 + AluSx SINE Alu 12 308 -4 3864 127 16 111 chr5 100878375 100878672 -98751478 + MER4D LTR ERV1 580 903 0 1675 152 42 0 chr5 100879353 100879617 -98750533 + AluJb SINE Alu 5 279 -33 1635 67 0 0 chr5 100880051 100880261 -98749889 - L1PA5 LINE L1 -2 6152 5943 2270 86 3 17 chr5 100880264 100880565 -98749585 - AluSx SINE Alu -15 297 1 35 0 0 0 chr5 100881439 100881474 -98748676 + AT_rich Low_complexity Low_complexity 1 35 0 3085 124 25 27 chr5 100881558 100882080 -98748070 + MER1A DNA MER1_type 9 529 0 195 343 104 8 chr5 100882191 100882325 -98747825 + MIR SINE MIR 85 231 -31 2279 99 24 0 chr5 100883427 100883721 -98746429 + AluSx SINE Alu 1 301 -11 201 250 62 0 chr5 100883757 100883805 -98746345 + MER5A DNA MER1_type 88 138 -51 327 308 109 60 chr5 100886701 100887003 -98743147 + L1M2 LINE L1 785 1101 -5748 203 279 16 16 chr5 100888474 100888535 -98741615 + L2 LINE L2 2728 2788 -526 793 287 108 29 chr5 100888562 100888980 -98741170 + L2 LINE L2 2863 3313 0 1276 82 0 101 chr5 100889646 100889854 -98740296 + AluSg/x SINE Alu 120 306 -6 239 284 97 45 chr5 100890377 100890511 -98739639 - MIR3 SINE MIR -43 165 25 268 338 98 4 chr5 100891076 100891301 -98738849 - MLT1L LTR MaLR -6 609 364 357 290 28 0 chr5 100891349 100891456 -98738694 - MLT1L LTR MaLR -341 274 165 2790 112 164 35 chr5 100891460 100891610 -98738540 + LTR35 LTR ERV1 1 130 -488 1815 191 0 0 chr5 100891610 100891909 -98738241 + AluJo SINE Alu 1 299 -13 2790 112 164 35 chr5 100891909 100892305 -98737845 + LTR35 LTR ERV1 130 618 0 4083 127 75 1 chr5 100892432 100893101 -98737049 - MER72 LTR ERV1 0 722 5 24 32 0 0 chr5 100893239 100893270 -98736880 + AT_rich Low_complexity Low_complexity 1 31 0 710 134 0 0 chr5 100893299 100893411 -98736739 - MER4E LTR ERV1 0 779 668 720 177 6 116 chr5 100893413 100893594 -98736556 + AluSg/x SINE Alu 152 312 0 386 95 32 0 chr5 100893596 100893659 -98736491 + GA-rich Low_complexity Low_complexity 3 67 0 3330 162 69 5 chr5 100893710 100894378 -98735772 - MER50 LTR ERV1 -23 711 1 701 263 6 6 chr5 100894378 100894549 -98735601 - MLT1C LTR MaLR -12 455 285 1345 137 14 0 chr5 100894578 100894797 -98735353 - MLT1C LTR MaLR -245 222 1 4186 163 12 70 chr5 100894846 100894878 -98735272 + L1MB8 LINE L1 5171 5203 -975 1659 155 68 4 chr5 100894878 100895166 -98734984 + AluSx SINE Alu 1 305 0 4186 163 12 70 chr5 100895166 100895303 -98734847 + L1MB8 LINE L1 5203 5346 -832 2338 57 0 0 chr5 100895303 100895582 -98734568 + AluY SINE Alu 23 301 -10 4186 163 12 70 chr5 100895582 100895950 -98734200 + L1MB8 LINE L1 5346 5734 -444 1922 146 4 0 chr5 100895950 100896255 -98733895 + AluJb SINE Alu 1 306 0 4186 163 12 70 chr5 100896255 100896779 -98733371 + L1MB8 LINE L1 5734 6175 -3 2301 91 13 0 chr5 100896856 100897154 -98732996 + AluY SINE Alu 1 302 -9 415 308 68 14 chr5 100897388 100897534 -98732616 - MER5A DNA MER1_type -10 179 26 765 242 103 9 chr5 100897644 100897867 -98732283 + MIR SINE MIR 19 262 0 2164 104 10 13 chr5 100898168 100898467 -98731683 + AluSq SINE Alu 1 298 -15 2447 80 0 0 chr5 100899342 100899653 -98730497 - AluY SINE Alu 0 311 1 1454 196 53 20 chr5 100899797 100900098 -98730052 + AluJo SINE Alu 1 311 -1 2482 58 0 0 chr5 100900734 100901042 -98729108 - AluY SINE Alu -3 308 1 340 256 97 11 chr5 100901680 100901856 -98728294 + L1MEd LINE L1 10 200 -5919 1755 146 27 10 chr5 100902737 100903031 -98727119 - AluJb SINE Alu -13 299 1 21 36 0 0 chr5 100903356 100903384 -98726766 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr5 100905104 100905124 -98725026 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 2483 81 0 0 chr5 100905126 100905436 -98724714 - AluY SINE Alu -1 310 1 1624 176 30 3 chr5 100905640 100905764 -98724386 + AluJb SINE Alu 1 120 -192 180 0 0 0 chr5 100905764 100905784 -98724366 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1624 176 30 3 chr5 100905784 100905954 -98724196 + AluJb SINE Alu 120 303 -9 305 300 70 0 chr5 100906113 100906213 -98723937 - MIR SINE MIR -62 146 40 2322 57 0 24 chr5 100906303 100906600 -98723550 + AluY SINE Alu 11 300 -11 2331 113 0 0 chr5 100906805 100907115 -98723035 - AluSg SINE Alu 0 310 1 226 323 91 0 chr5 100907123 100907236 -98722914 + MIR SINE MIR 51 184 -24 296 153 20 51 chr5 100907648 100907746 -98722404 - Charlie7 DNA MER1_type 0 2612 2518 2233 100 0 16 chr5 100907747 100908057 -98722093 + AluSp SINE Alu 1 305 -8 41 72 0 0 chr5 100908100 100908183 -98721967 + AT_rich Low_complexity Low_complexity 1 83 0 180 0 0 0 chr5 100908887 100908907 -98721243 + (TG)n Simple_repeat Simple_repeat 1 20 0 180 77 0 0 chr5 100908907 100908933 -98721217 + (GA)n Simple_repeat Simple_repeat 2 27 0 2490 48 6 6 chr5 100910837 100911148 -98719002 - AluY SINE Alu 0 311 1 1626 167 75 10 chr5 100911159 100911452 -98718698 - AluJb SINE Alu 0 312 1 21 0 0 0 chr5 100911543 100911564 -98718586 + AT_rich Low_complexity Low_complexity 1 21 0 416 296 126 10 chr5 100911786 100911992 -98718158 - MIR SINE MIR -28 234 5 310 237 13 13 chr5 100912115 100912191 -98717959 + L2 LINE L2 3197 3272 -41 2030 152 3 0 chr5 100912775 100913072 -98717078 - AluSx SINE Alu -14 298 1 949 223 15 5 chr5 100914218 100914415 -98715735 + MIR SINE MIR 52 250 -12 2267 105 0 3 chr5 100915160 100915456 -98714694 - AluSq SINE Alu -18 295 1 2192 87 14 0 chr5 100915997 100916302 -98713848 - AluSq SINE Alu 0 313 5 1780 135 0 4 chr5 100916490 100916749 -98713401 + AluJo SINE Alu 3 260 -52 393 188 0 0 chr5 100916781 100916861 -98713289 + GA-rich Low_complexity Low_complexity 2 81 0 187 220 60 0 chr5 100916873 100916923 -98713227 + MIR SINE MIR 1 53 -209 673 189 31 0 chr5 100916983 100917110 -98713040 + FLAM_C SINE Alu 3 133 0 1708 166 78 0 chr5 100917170 100917454 -98712696 - AluSx SINE Alu -6 306 1 351 306 104 33 chr5 100917929 100918112 -98712038 - MIR SINE MIR -2 260 65 419 270 112 49 chr5 100919066 100919333 -98710817 - MER102b DNA MER1_type -2 339 56 498 287 66 36 chr5 100920221 100920388 -98709762 - MIR SINE MIR -78 184 13 275 24 0 49 chr5 100921846 100921887 -98708263 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1871 135 50 7 chr5 100922091 100922372 -98707778 + AluSx SINE Alu 1 293 -19 251 321 130 14 chr5 100923814 100923955 -98706195 + MIR SINE MIR 28 140 -68 1727 127 62 49 chr5 100924288 100924596 -98705554 - AluSx SINE Alu 0 312 1 1996 141 3 0 chr5 100924819 100925141 -98705009 - AluSx SINE Alu 0 312 1 28 0 0 0 chr5 100925329 100925357 -98704793 + AT_rich Low_complexity Low_complexity 1 28 0 194 328 23 70 chr5 100925661 100925789 -98704361 - L2 LINE L2 -235 3037 2916 200 333 85 26 chr5 100926997 100927150 -98703000 - MIR SINE MIR -71 191 30 22 35 0 0 chr5 100928388 100928417 -98701733 + AT_rich Low_complexity Low_complexity 1 29 0 334 347 201 8 chr5 100928849 100929318 -98700832 - L2 LINE L2 0 3272 2718 542 240 136 0 chr5 100929987 100930141 -98700009 - MIR SINE MIR -2 260 86 377 85 0 17 chr5 100931461 100931520 -98698630 + (TG)n Simple_repeat Simple_repeat 2 59 0 358 225 0 0 chr5 100931530 100931619 -98698531 - L1MC4 LINE L1 -1340 6702 6614 265 250 23 0 chr5 100931541 100931629 -98698521 + L1MC4 LINE L1 6614 6703 -1339 * 234 130 0 0 chr5 100931651 100931697 -98698453 + LTR66 LTR ERVL 394 439 -171 2226 129 18 6 chr5 100932547 100932879 -98697271 + MER1B DNA MER1_type 1 336 -1 309 51 0 0 chr5 100933189 100933228 -98696922 + (TG)n Simple_repeat Simple_repeat 2 40 0 605 312 102 0 chr5 100934514 100934729 -98695421 - MIR SINE MIR -8 254 18 2296 100 7 0 chr5 100934903 100935212 -98694938 - AluSq SINE Alu -2 311 1 2257 112 3 0 chr5 100935457 100935752 -98694398 + AluSx SINE Alu 2 297 -15 29 0 0 0 chr5 100935818 100935847 -98694303 + AT_rich Low_complexity Low_complexity 1 29 0 303 203 0 0 chr5 100935917 100935981 -98694169 + (TATG)n Simple_repeat Simple_repeat 2 65 0 228 286 25 17 chr5 100936037 100936156 -98693994 + L1ME4a LINE L1 5946 6065 -56 257 378 8 8 chr5 100936892 100937011 -98693139 - MIR SINE MIR -122 140 22 1592 128 0 13 chr5 100938269 100938503 -98691647 + AluSg/x SINE Alu 75 305 -7 268 314 47 12 chr5 100938543 100938629 -98691521 + MER5A DNA MER1_type 40 128 -61 337 288 196 26 chr5 100938653 100938806 -98691344 + MER5A DNA MER1_type 11 189 0 432 0 0 0 chr5 100938973 100939021 -98691129 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 200 336 14 0 chr5 100939509 100939586 -98690564 - MIR SINE MIR -72 136 59 579 267 62 13 chr5 100939728 100939953 -98690197 - LTR16A1 LTR ERVL -55 402 167 686 267 75 63 chr5 100941043 100941537 -98688613 + MLT1J LTR MaLR 1 500 -11 1021 285 174 22 chr5 100941620 100942308 -98687842 + L2 LINE L2 2453 3296 -17 1546 159 76 21 chr5 100943809 100944098 -98686052 - AluJo SINE Alu -7 305 1 2199 126 7 0 chr5 100944101 100944410 -98685740 - AluSx SINE Alu -1 311 1 636 209 0 0 chr5 100944413 100944528 -98685622 - FLAM_A SINE Alu -12 130 16 609 283 53 35 chr5 100945350 100945576 -98684574 + MIR SINE MIR 29 258 -4 245 316 15 138 chr5 100945716 100945781 -98684369 - MIR3 SINE MIR -21 187 116 2176 126 0 0 chr5 100945781 100946083 -98684067 + AluSx SINE Alu 1 302 -10 245 316 15 138 chr5 100946083 100946213 -98683937 - MIR3 SINE MIR -92 116 16 2019 166 0 3 chr5 100947491 100947804 -98682346 - AluJb SINE Alu 0 312 1 186 296 108 72 chr5 100947866 100948089 -98682061 + L2 LINE L2 2581 2811 -503 780 145 0 0 chr5 100948847 100948978 -98681172 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 722 280 65 40 chr5 100949011 100949336 -98680814 + L2 LINE L2 2981 3313 0 206 31 0 31 chr5 100949346 100949378 -98680772 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 217 277 46 0 chr5 100949722 100949787 -98680363 + L2 LINE L2 3246 3313 0 2228 100 10 0 chr5 100949858 100950149 -98680001 - AluSx SINE Alu -18 294 1 1647 179 0 0 chr5 100950434 100950697 -98679453 - AluJb SINE Alu -6 306 44 581 160 0 0 chr5 100950697 100950791 -98679359 - AluSg/x SINE Alu -6 306 213 2226 246 45 36 chr5 100951611 100952384 -98677766 + L1MEc LINE L1 7 786 -5610 2224 184 68 4 chr5 100952400 100952872 -98677278 - MER90 LTR ERV1 -44 570 69 238 262 48 0 chr5 100953097 100953181 -98676969 - L1ME LINE L1 -5978 92 5 747 237 38 27 chr5 100954244 100954430 -98675720 + MER5A DNA MER1_type 1 188 -1 513 309 40 10 chr5 100954430 100954631 -98675519 + MIR SINE MIR 8 214 -48 367 216 274 0 chr5 100954693 100954822 -98675328 + MLT1G LTR MaLR 2 124 -431 470 219 38 38 chr5 100954877 100954946 -98675204 - MER63A DNA MER1_type -1513 175 107 2121 129 0 3 chr5 100954946 100955265 -98674885 - AluSx SINE Alu 0 318 1 470 219 38 38 chr5 100955265 100955354 -98674796 - MER63A DNA MER1_type -1580 108 16 860 245 83 29 chr5 100955378 100955725 -98674425 + MLT1G LTR MaLR 143 582 -8 2099 132 7 0 chr5 100955750 100956045 -98674105 + AluSx SINE Alu 1 297 -15 26 0 0 0 chr5 100958430 100958456 -98671694 + AT_rich Low_complexity Low_complexity 1 26 0 1754 159 10 38 chr5 100960768 100961057 -98669093 + AluJo SINE Alu 1 281 -31 595 260 136 38 chr5 100961226 100961461 -98668689 + MIR SINE MIR 5 262 0 369 322 47 0 chr5 100962120 100962269 -98667881 - LTR67 LTR ERVL -336 221 66 181 276 69 35 chr5 100962331 100962418 -98667732 + L2 LINE L2 2969 3058 -214 378 245 29 20 chr5 100962452 100962554 -98667596 + L2 LINE L2 3208 3310 -3 27 49 0 0 chr5 100962620 100962661 -98667489 + AT_rich Low_complexity Low_complexity 1 41 0 2066 105 36 0 chr5 100962703 100963005 -98667145 + AluSx SINE Alu 1 312 0 304 296 56 9 chr5 100963371 100963479 -98666671 - MIR SINE MIR -66 142 30 432 55 0 0 chr5 100963950 100964005 -98666145 + (TG)n Simple_repeat Simple_repeat 1 55 0 2025 108 73 0 chr5 100964560 100964848 -98665302 + AluSq SINE Alu 1 309 -4 696 276 12 12 chr5 100965354 100965524 -98664626 + MIR SINE MIR 5 174 -88 188 75 0 50 chr5 100965534 100965574 -98664576 + (TTTTTA)n Simple_repeat Simple_repeat 5 42 0 850 251 36 112 chr5 100965591 100966010 -98664140 - L2 LINE L2 -5 3267 2881 270 0 0 0 chr5 100966661 100966691 -98663459 + (TC)n Simple_repeat Simple_repeat 2 31 0 2353 109 0 3 chr5 100966708 100967019 -98663131 - AluSg SINE Alu 0 310 1 409 215 56 37 chr5 100968803 100968910 -98661240 - MIR SINE MIR -38 224 116 26 64 0 0 chr5 100970860 100970907 -98659243 + AT_rich Low_complexity Low_complexity 1 47 0 192 77 0 0 chr5 100970963 100970989 -98659161 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr5 100972195 100972216 -98657934 + AT_rich Low_complexity Low_complexity 1 21 0 760 105 32 0 chr5 100972289 100972413 -98657737 - L1MA7 LINE L1 0 6291 6164 13208 181 26 8 chr5 100972414 100974706 -98655444 - L1M2 LINE L1 -743 5403 3186 2121 143 0 6 chr5 100974706 100975020 -98655130 + AluSx SINE Alu 1 312 0 13208 181 26 8 chr5 100975020 100975747 -98654403 - L1M2 LINE L1 -2960 3186 2473 2127 117 10 32 chr5 100975790 100976098 -98654052 - AluSx SINE Alu -11 301 1 243 209 15 0 chr5 100976253 100976320 -98653830 - HAL1b LINE L1 -656 692 625 494 226 240 0 chr5 100976385 100976531 -98653619 + MER5A DNA MER1_type 9 189 0 700 228 0 33 chr5 100976539 100976723 -98653427 - MER5B DNA MER1_type 0 178 1 203 276 17 17 chr5 100976840 100976898 -98653252 + MER5A DNA MER1_type 131 188 -1 * 221 322 34 0 chr5 100976898 100976956 -98653194 - L2 LINE L2 -2027 1287 1228 410 240 96 0 chr5 100977242 100977367 -98652783 - MIR3 SINE MIR -5 203 67 2011 151 0 3 chr5 100977521 100977819 -98652331 + AluSx SINE Alu 1 297 -15 23 33 0 0 chr5 100978596 100978626 -98651524 + AT_rich Low_complexity Low_complexity 1 30 0 231 224 0 0 chr5 100978786 100978835 -98651315 - MER63 DNA MER1_type -3 1059 1011 3347 138 52 9 chr5 100978878 100979404 -98650746 - LTR39 LTR ERV1 0 783 232 4368 102 28 2 chr5 100979404 100980022 -98650128 + MER51A LTR ERV1 1 634 0 3347 138 52 9 chr5 100980022 100980039 -98650111 - LTR39 LTR ERV1 -551 232 217 5851 121 20 5 chr5 100980059 100981263 -98648887 + L1PB1 LINE L1 4938 6151 0 192 152 0 0 chr5 100981290 100981323 -98648827 + A-rich Low_complexity Low_complexity 1 33 0 1198 97 24 89 chr5 100981323 100981570 -98648580 - LTR39 LTR ERV1 -552 231 1 268 211 70 0 chr5 100981570 100981627 -98648523 - MER63 DNA MER1_type -315 747 687 389 253 82 35 chr5 100981990 100982053 -98648097 + MER5B DNA MER1_type 1 60 -118 2578 65 0 0 chr5 100982053 100982362 -98647788 + AluSc SINE Alu 1 309 0 389 253 82 35 chr5 100982362 100982468 -98647682 + MER5B DNA MER1_type 60 178 0 397 309 114 53 chr5 100982952 100983503 -98646647 - L2 LINE L2 -5 3308 2723 1192 249 81 88 chr5 100983521 100984215 -98645935 + MER21B LTR ERV1 24 712 -151 225 0 0 0 chr5 100984221 100984246 -98645904 + (TG)n Simple_repeat Simple_repeat 2 26 0 1800 180 123 75 chr5 100984839 100985593 -98644557 + LTR1B LTR ERV1 1 981 -39 2457 184 119 53 chr5 100985720 100986555 -98643595 - Charlie2 DNA MER1_type -35 2827 1924 2291 109 0 31 chr5 100986555 100986877 -98643273 + AluSx SINE Alu 1 312 0 2457 184 119 53 chr5 100986877 100986953 -98643197 - Charlie2 DNA MER1_type -938 1924 1855 360 291 78 30 chr5 100986988 100987256 -98642894 - Charlie2 DNA MER1_type -2497 285 5 244 333 31 0 chr5 100988052 100988148 -98642002 - MER5A DNA MER1_type -2 187 89 246 307 140 0 chr5 100988643 100988757 -98641393 - MIR SINE MIR -83 179 50 1299 113 21 0 chr5 100989236 100989422 -98640728 - AluSc SINE Alu -2 307 118 180 323 11 75 chr5 100989428 100989521 -98640629 + L2 LINE L2 3166 3252 -20 1451 211 56 12 chr5 100989889 100990231 -98639919 - MLT1A1 LTR MaLR -8 357 1 187 265 15 29 chr5 100990420 100990488 -98639662 - MIR3 SINE MIR -5 203 137 900 218 98 36 chr5 100991564 100991640 -98638510 - MER8 DNA MER2_type 0 239 169 2633 111 39 5 chr5 100991640 100992054 -98638096 + MSTA LTR MaLR 1 428 0 900 218 98 36 chr5 100992054 100992202 -98637948 - MER8 DNA MER2_type -70 169 1 479 275 110 58 chr5 100992375 100992720 -98637430 - L1ME3 LINE L1 -214 5948 5586 303 325 24 16 chr5 100993030 100993153 -98636997 - L1MEd LINE L1 -5994 125 2 24 0 0 0 chr5 100993326 100993350 -98636800 + AT_rich Low_complexity Low_complexity 1 24 0 2229 105 0 3 chr5 100993916 100994211 -98635939 + AluSc SINE Alu 6 299 -10 24 67 0 0 chr5 100994595 100994640 -98635510 + AT_rich Low_complexity Low_complexity 1 45 0 1891 133 7 14 chr5 100995369 100995677 -98634473 - AluSx SINE Alu 0 306 1 249 276 86 0 chr5 100997060 100997118 -98633032 - L2 LINE L2 -21 3251 3189 423 250 0 0 chr5 100997456 100997540 -98632610 - L2 LINE L2 -5 3267 3184 1619 212 13 3 chr5 100997544 100997922 -98632228 + L1M4 LINE L1 2620 3001 -3145 190 219 24 0 chr5 100997922 100997963 -98632187 - L2 LINE L2 -83 3189 3148 23 55 0 18 chr5 100997980 100998000 -98632150 + AT_rich Low_complexity Low_complexity 1 20 -34 1870 135 31 10 chr5 100998000 100998289 -98631861 - AluJb SINE Alu -17 295 1 23 55 0 18 chr5 100998289 100998323 -98631827 + AT_rich Low_complexity Low_complexity 20 54 0 450 314 208 7 chr5 100998347 100998651 -98631499 - L2 LINE L2 -231 3082 2707 2841 186 17 2 chr5 100998847 100999364 -98630786 + Tigger7 DNA MER2_type 1 525 -208 390 192 0 0 chr5 100999358 100999431 -98630719 + Tigger7 DNA MER2_type 2496 2568 -19 * 484 320 40 0 chr5 100999531 100999681 -98630469 - L2 LINE L2 -609 2705 2550 2128 235 63 19 chr5 100999716 101000283 -98629867 + MLT1E LTR MaLR 1 592 -1 347 135 0 0 chr5 101000291 101000343 -98629807 + THE1C LTR MaLR 320 371 -4 804 161 0 0 chr5 101000343 101000461 -98629689 - FLAM_C SINE Alu -15 118 1 465 90 0 0 chr5 101000465 101000532 -98629618 - MLT2B1 LTR ERVL -453 67 1 1929 179 21 30 chr5 101001704 101002134 -98628016 + MLT2D LTR ERVL 1 512 -8 246 81 0 0 chr5 101003525 101003562 -98626588 + (CA)n Simple_repeat Simple_repeat 1 37 0 2234 78 0 3 chr5 101003825 101004155 -98625995 + AluSc SINE Alu 1 329 0 431 255 138 60 chr5 101005125 101005545 -98624605 + LTR67 LTR ERVL 98 550 -7 374 186 0 0 chr5 101005758 101005828 -98624322 + LTR33 LTR ERVL 4 73 -448 787 176 55 41 chr5 101006113 101006323 -98623827 - MER61D LTR ERV1 -12 741 337 186 254 0 0 chr5 101007100 101007167 -98622983 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 189 314 12 47 chr5 101007167 101007253 -98622897 + MER5A DNA MER1_type 85 167 -22 2238 103 0 0 chr5 101007353 101007644 -98622506 + AluSp SINE Alu 21 311 -2 723 203 8 0 chr5 101008653 101008781 -98621369 + MLT1E LTR MaLR 1 129 -464 710 237 148 50 chr5 101008770 101009057 -98621093 + MLT1E LTR MaLR 266 622 -2 * 2197 104 3 3 chr5 101009366 101009663 -98620487 - AluSc SINE Alu -12 297 1 262 254 0 100 chr5 101010865 101010995 -98619155 + L1P LINE L1 5310 5426 -740 458 289 86 11 chr5 101011396 101011583 -98618567 - MLT1K LTR MaLR -35 553 353 267 235 78 43 chr5 101011587 101011702 -98618448 + MIR SINE MIR 94 212 -50 21 0 0 0 chr5 101011912 101011933 -98618217 + AT_rich Low_complexity Low_complexity 1 21 0 231 195 0 0 chr5 101012472 101012513 -98617637 + MLT1I LTR MaLR 109 149 -260 307 290 117 68 chr5 101012521 101012683 -98617467 + MIR SINE MIR 86 255 -7 207 0 0 0 chr5 101013136 101013159 -98616991 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 4128 97 16 0 chr5 101013670 101014215 -98615935 + MER41A LTR ERV1 1 554 0 612 0 0 0 chr5 101014775 101014843 -98615307 + (CA)n Simple_repeat Simple_repeat 2 69 0 278 295 0 27 chr5 101015278 101015390 -98614760 + G-rich Low_complexity Low_complexity 2 110 0 305 0 50 0 chr5 101016034 101016074 -98614076 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 812 41 0 0 chr5 101016313 101016411 -98613739 + AluSg/x SINE Alu 205 302 -7 268 270 270 7 chr5 101016476 101016624 -98613526 + MIR SINE MIR 76 262 0 183 214 24 0 chr5 101017626 101017668 -98612482 + MER5B DNA MER1_type 7 49 -129 429 283 26 26 chr5 101017720 101017833 -98612317 - MER5B DNA MER1_type -59 119 7 2332 101 3 0 chr5 101018073 101018369 -98611781 - AluSc SINE Alu -12 297 1 460 187 22 90 chr5 101018707 101018841 -98611309 + LTR67 LTR ERVL 431 555 -2 1455 240 53 12 chr5 101019923 101020340 -98609810 - MLT1C LTR MaLR 0 467 34 24 53 0 0 chr5 101020632 101020670 -98609480 + AT_rich Low_complexity Low_complexity 1 38 0 372 247 108 18 chr5 101020736 101021125 -98609025 - L1ME4a LINE L1 -294 5827 5319 2478 70 0 0 chr5 101021153 101021451 -98608699 - AluSg SINE Alu 0 310 13 1921 153 0 19 chr5 101021545 101021859 -98608291 - AluJb SINE Alu 0 312 5 2245 124 7 0 chr5 101023870 101024177 -98605973 + AluSx SINE Alu 1 309 -3 764 197 8 0 chr5 101024330 101024462 -98605688 + FLAM_C SINE Alu 1 133 0 2511 73 0 0 chr5 101024702 101025002 -98605148 - AluY SINE Alu -11 300 1 346 133 0 0 chr5 101025229 101025289 -98604861 + L1MB7 LINE L1 6109 6168 -16 1579 152 4 8 chr5 101025381 101025637 -98604513 - AluJb SINE Alu -31 281 27 408 154 37 206 chr5 101025891 101025948 -98604202 - MER81 DNA DNA 0 114 92 1352 164 62 66 chr5 101025948 101026252 -98603898 + AluJo SINE Alu 3 305 -7 408 154 37 206 chr5 101026252 101026330 -98603820 - MER81 DNA DNA -22 92 2 225 293 103 86 chr5 101026377 101026551 -98603599 + MIR3 SINE MIR 17 193 -15 523 283 143 16 chr5 101027044 101027358 -98602792 - L1MEd LINE L1 -5215 904 551 358 270 48 40 chr5 101027367 101027493 -98602657 - L1MEd LINE L1 -5725 394 268 1929 151 3 28 chr5 101028558 101028875 -98601275 + AluJb SINE Alu 4 312 0 205 154 19 77 chr5 101031240 101031292 -98598858 - L2 LINE L2 0 3313 3265 551 209 99 113 chr5 101031364 101031718 -98598432 + Charlie8 DNA MER1_type 46 394 -2023 314 218 0 26 chr5 101031729 101031807 -98598343 + Charlie8 DNA MER1_type 2339 2414 -3 633 260 178 10 chr5 101033120 101033328 -98596822 - MIR SINE MIR -15 247 5 2269 108 0 0 chr5 101033549 101033845 -98596305 - AluSx SINE Alu -16 296 1 483 208 56 1 chr5 101035017 101035136 -98595014 - L1MC4 LINE L1 -1 8041 7880 195 100 0 0 chr5 101035142 101035172 -98594978 + (TC)n Simple_repeat Simple_repeat 2 31 0 * 270 206 0 0 chr5 101035171 101035234 -98594916 + (TA)n Simple_repeat Simple_repeat 2 64 0 232 203 16 16 chr5 101035234 101035298 -98594852 + LTR66 LTR ERVL 398 461 -149 2105 202 19 47 chr5 101035370 101035487 -98594663 - L1MC4 LINE L1 -122 7920 7801 2308 97 0 0 chr5 101035487 101035795 -98594355 + AluSq SINE Alu 1 308 -5 2105 202 19 47 chr5 101035795 101036206 -98593944 - L1MC4 LINE L1 -241 7801 7407 256 322 52 17 chr5 101036356 101036471 -98593679 + L2 LINE L2 3153 3271 -1 23 33 0 0 chr5 101038166 101038196 -98591954 + AT_rich Low_complexity Low_complexity 1 30 0 1961 116 42 0 chr5 101038554 101038839 -98591311 - AluSx SINE Alu -15 297 1 333 0 0 0 chr5 101039188 101039225 -98590925 + (TG)n Simple_repeat Simple_repeat 2 38 0 2367 60 7 3 chr5 101040737 101041035 -98589115 + AluY SINE Alu 1 299 -12 199 299 90 0 chr5 101042008 101042075 -98588075 + MIR SINE MIR 84 156 -106 28 61 0 0 chr5 101042621 101042670 -98587480 + AT_rich Low_complexity Low_complexity 1 49 0 677 266 207 16 chr5 101043780 101044084 -98586066 - L2 LINE L2 -36 3277 2916 660 299 128 32 chr5 101044145 101044899 -98585251 + L2 LINE L2 2454 3296 -17 279 257 57 0 chr5 101045006 101045076 -98585074 - MIR SINE MIR -116 146 73 431 271 141 27 chr5 101047085 101047522 -98582628 + LTR33 LTR ERVL 23 521 0 32 0 0 0 chr5 101049405 101049437 -98580713 + AT_rich Low_complexity Low_complexity 1 32 0 256 259 19 0 chr5 101052011 101052065 -98578085 - L3 LINE CR1 -5 1572 1518 3467 190 52 23 chr5 101052765 101053550 -98576600 + L1MA9 LINE L1 5467 6274 -38 562 252 109 81 chr5 101054002 101054323 -98575827 - L2 LINE L2 -2 3270 2941 1894 144 3 7 chr5 101054641 101054926 -98575224 + AluJb SINE Alu 1 284 -28 184 259 52 17 chr5 101055412 101055470 -98574680 + MIR SINE MIR 197 256 -6 207 0 0 0 chr5 101057673 101057696 -98572454 + (T)n Simple_repeat Simple_repeat 1 23 0 583 295 53 11 chr5 101058636 101058826 -98571324 + MIR SINE MIR 65 262 0 190 327 115 18 chr5 101059060 101059173 -98570977 - MIR3 SINE MIR -76 132 9 192 200 0 0 chr5 101059641 101059681 -98570469 + (CA)n Simple_repeat Simple_repeat 2 41 0 229 218 103 0 chr5 101061006 101061084 -98569066 - L1ME LINE L1 -383 5781 5696 232 323 11 11 chr5 101061111 101061204 -98568946 - L1ME LINE L1 -2217 5591 5499 22 80 0 0 chr5 101062624 101062674 -98567476 + AT_rich Low_complexity Low_complexity 1 50 0 302 223 85 0 chr5 101064588 101064682 -98565468 - MER103 DNA DNA -48 118 17 2096 145 0 0 chr5 101065036 101065346 -98564804 + AluSg SINE Alu 1 310 0 261 222 62 62 chr5 101066020 101066101 -98564049 - L2 LINE L2 -34 3279 3199 1207 157 48 22 chr5 101066376 101066606 -98563544 + MER46A DNA MER2_type 1 236 0 1972 145 13 7 chr5 101067656 101067966 -98562184 - AluJo SINE Alu 0 312 1 322 233 121 58 chr5 101069655 101069725 -98560425 - MER112 DNA MER1_type -35 225 161 1838 177 0 20 chr5 101069725 101070025 -98560125 + AluJb SINE Alu 1 294 -18 288 0 0 0 chr5 101070032 101070064 -98560086 + (TG)n Simple_repeat Simple_repeat 2 33 0 322 233 121 58 chr5 101070064 101070191 -98559959 - MER112 DNA MER1_type -104 156 7 207 0 0 0 chr5 101070431 101070454 -98559696 + (A)n Simple_repeat Simple_repeat 1 23 0 327 271 75 9 chr5 101071556 101071663 -98558487 + MIR SINE MIR 117 230 -32 22 0 0 0 chr5 101072118 101072140 -98558010 + AT_rich Low_complexity Low_complexity 1 22 0 528 276 17 11 chr5 101072622 101072796 -98557354 + MIR SINE MIR 88 262 0 862 214 51 17 chr5 101072946 101073124 -98557026 + MER5A DNA MER1_type 6 189 0 1775 171 3 0 chr5 101073159 101073481 -98556669 + AluJb SINE Alu 1 323 0 871 228 40 28 chr5 101075002 101075252 -98554898 + MIR SINE MIR 9 261 -1 424 230 74 37 chr5 101076844 101077013 -98553137 + MIR SINE MIR 7 186 -62 232 231 39 0 chr5 101077670 101077722 -98552428 - MIR SINE MIR -5 257 204 2819 85 0 0 chr5 101078417 101078781 -98551369 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr5 101079652 101079676 -98550474 + AT_rich Low_complexity Low_complexity 1 24 0 1689 152 21 95 chr5 101082332 101082752 -98547398 + MLT1B LTR MaLR 2 390 0 328 298 67 0 chr5 101083503 101083607 -98546543 - L1ME3A LINE L1 -224 5946 5836 228 292 50 8 chr5 101083810 101083930 -98546220 - L1ME3A LINE L1 -676 5490 5366 250 223 141 0 chr5 101083931 101084052 -98546098 - L1ME3A LINE L1 -808 5338 5201 2256 106 0 10 chr5 101084052 101084355 -98545795 - AluSx SINE Alu -12 300 1 2265 114 0 0 chr5 101084676 101084966 -98545184 - AluSx SINE Alu -22 290 1 216 0 0 0 chr5 101085476 101085500 -98544650 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1769 142 55 68 chr5 101085798 101086178 -98543972 + THE1C LTR MaLR 1 375 0 183 184 0 61 chr5 101086503 101086552 -98543598 + L2 LINE L2 3190 3235 -78 21 36 0 0 chr5 101086896 101086924 -98543226 + AT_rich Low_complexity Low_complexity 1 28 0 290 292 94 0 chr5 101087010 101087106 -98543044 - MIR SINE MIR -111 151 47 190 291 128 12 chr5 101087682 101087768 -98542382 + MIR SINE MIR 20 115 -147 325 324 0 9 chr5 101087992 101088103 -98542047 + CT-rich Low_complexity Low_complexity 5 114 0 190 315 92 31 chr5 101088124 101088254 -98541896 + L2 LINE L2 2281 2418 -896 351 185 148 0 chr5 101088281 101088362 -98541788 - MER96 DNA MER1_type? -28 147 55 1964 87 4 0 chr5 101089110 101089362 -98540788 - AluSp SINE Alu -11 302 50 1403 12 0 0 chr5 101090183 101090352 -98539798 - L1PA2 LINE L1 -1117 5029 4861 7681 20 0 6 chr5 101090352 101091529 -98538621 + L1PA2 LINE L1 5002 6155 0 780 253 109 11 chr5 101092403 101092668 -98537482 - MER102a DNA MER1_type -12 318 28 2480 50 0 3 chr5 101094231 101094534 -98535616 + AluY SINE Alu 1 302 -9 22 35 0 0 chr5 101095260 101095289 -98534861 + AT_rich Low_complexity Low_complexity 1 29 0 230 114 0 23 chr5 101095527 101095571 -98534579 + (GAAA)n Simple_repeat Simple_repeat 4 46 0 23 0 0 0 chr5 101096934 101096957 -98533193 + AT_rich Low_complexity Low_complexity 1 23 0 489 259 46 0 chr5 101097431 101097562 -98532588 - MIR SINE MIR -44 218 82 344 212 150 53 chr5 101097682 101097795 -98532355 - MIR SINE MIR -79 183 60 1937 134 29 0 chr5 101098153 101098459 -98531691 - AluJo SINE Alu 0 314 1 21 40 0 40 chr5 101098493 101098525 -98531625 + AT_rich Low_complexity Low_complexity 1 32 -16 1868 159 3 7 chr5 101098525 101098821 -98531329 + AluJo SINE Alu 1 295 -17 21 40 0 40 chr5 101098821 101098838 -98531312 + AT_rich Low_complexity Low_complexity 32 48 0 25 75 0 0 chr5 101098926 101098979 -98531171 + AT_rich Low_complexity Low_complexity 1 53 0 1636 162 45 0 chr5 101099746 101099864 -98530286 + AluJo SINE Alu 4 115 -194 273 29 0 0 chr5 101099864 101099898 -98530252 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1636 162 45 0 chr5 101099898 101100073 -98530077 + AluJo SINE Alu 115 309 0 297 344 195 5 chr5 101100530 101100725 -98529425 + MIR SINE MIR 31 262 0 283 305 0 24 chr5 101100742 101100824 -98529326 + MIR SINE MIR 18 97 -111 191 237 0 0 chr5 101100894 101100932 -98529218 + L2 LINE L2 3216 3253 -19 364 339 9 0 chr5 101102847 101102962 -98527188 - L2 LINE L2 -14 3299 3184 1341 161 0 0 chr5 101103551 101103750 -98526400 + AluJo SINE Alu 5 203 -109 1138 99 31 0 chr5 101104451 101104613 -98525537 - L1PA15 LINE L1 -2 6163 5997 312 204 193 23 chr5 101104799 101104887 -98525263 + MIR SINE MIR 49 151 -111 189 260 99 127 chr5 101104971 101105304 -98524846 + L2 LINE L2 2553 2896 -417 581 238 58 58 chr5 101105304 101105565 -98524585 + MIR SINE MIR 2 262 0 189 260 99 127 chr5 101105565 101105642 -98524508 + L2 LINE L2 2896 2974 -339 200 287 122 26 chr5 101106079 101106194 -98523956 + MIR SINE MIR 89 214 -48 313 311 17 17 chr5 101106421 101106540 -98523610 + L2 LINE L2 3195 3313 0 621 311 57 0 chr5 101107376 101107569 -98522581 - MIR SINE MIR -34 228 25 209 318 109 0 chr5 101108531 101108641 -98521509 + MIR3 SINE MIR 75 196 -12 511 335 80 13 chr5 101108698 101108937 -98521213 + MIR SINE MIR 8 262 0 2153 121 7 3 chr5 101109019 101109316 -98520834 - AluSx SINE Alu -14 298 1 2162 132 0 3 chr5 101109577 101109880 -98520270 + AluSc SINE Alu 1 302 -7 1703 174 13 29 chr5 101110380 101110690 -98519460 + AluJb SINE Alu 2 306 -6 488 231 87 0 chr5 101110699 101110803 -98519347 + MIR SINE MIR 15 127 -135 389 249 58 69 chr5 101111360 101111549 -98518601 + MIR SINE MIR 73 259 -3 21 36 0 0 chr5 101113504 101113532 -98516618 + AT_rich Low_complexity Low_complexity 1 28 0 341 360 84 26 chr5 101113779 101114162 -98515988 + L1MEd LINE L1 389 793 -5326 244 154 0 0 chr5 101114162 101114201 -98515949 + AluJb SINE Alu 1 39 -263 1743 151 0 7 chr5 101114258 101114530 -98515620 + AluJb SINE Alu 42 311 -1 329 273 17 34 chr5 101114547 101114723 -98515427 + L1MEd LINE L1 908 1080 -5039 1764 106 0 4 chr5 101115380 101115615 -98514535 + AluSc SINE Alu 58 291 -18 228 302 124 16 chr5 101117153 101117282 -98512868 + MIR SINE MIR 120 262 0 23 0 0 0 chr5 101117318 101117341 -98512809 + AT_rich Low_complexity Low_complexity 1 23 0 1763 148 25 44 chr5 101117653 101117970 -98512180 - AluJo SINE Alu -1 311 1 250 237 34 0 chr5 101119334 101119393 -98510757 + MIR SINE MIR 89 149 -113 27 49 0 0 chr5 101120248 101120289 -98509861 + GC_rich Low_complexity Low_complexity 1 41 0 436 197 63 14 chr5 101120663 101120805 -98509345 + L1MC4 LINE L1 7017 7165 -877 27 0 0 0 chr5 101120805 101120832 -98509318 + AT_rich Low_complexity Low_complexity 1 27 0 2234 102 3 3 chr5 101121187 101121482 -98508668 - AluSx SINE Alu -15 297 3 2111 118 7 3 chr5 101121780 101122076 -98508074 + AluSx SINE Alu 1 297 -15 212 256 55 85 chr5 101122207 101122371 -98507779 - MER5B DNA MER1_type -2 176 18 479 265 161 12 chr5 101122404 101122566 -98507584 + MER5A DNA MER1_type 4 189 0 301 269 19 37 chr5 101122903 101123011 -98507139 - MIR3 SINE MIR -51 157 52 498 314 139 22 chr5 101123181 101123678 -98506472 + LTR67 LTR ERVL 3 557 0 209 356 0 0 chr5 101123722 101123809 -98506341 + MIR3 SINE MIR 113 199 -9 232 323 61 24 chr5 101124472 101124636 -98505514 - L2 LINE L2 -1148 2166 1997 380 292 146 11 chr5 101125122 101125300 -98504850 - MIR SINE MIR -12 250 49 1878 97 4 26 chr5 101125823 101126090 -98504060 - AluSg SINE Alu -12 298 38 1885 136 3 63 chr5 101126137 101126453 -98503697 - AluJb SINE Alu -15 297 1 383 289 150 12 chr5 101126584 101126757 -98503393 + MIR SINE MIR 47 243 -19 254 228 0 87 chr5 101126849 101126941 -98503209 - MIR SINE MIR -1 261 178 259 286 205 0 chr5 101127460 101127621 -98502529 + L1ME LINE L1 5520 5713 -408 483 255 153 31 chr5 101127756 101127952 -98502198 - MIR SINE MIR -41 221 2 248 300 69 12 chr5 101127954 101128114 -98502036 + L1ME LINE L1 5748 5916 -205 2138 80 22 0 chr5 101128345 101128652 -98501498 - AluY SINE Alu 0 313 1 229 216 135 14 chr5 101129383 101129457 -98500693 - MIR3 SINE MIR -45 163 81 972 321 82 27 chr5 101130067 101130544 -98499606 - L2 LINE L2 0 3313 2811 376 298 64 14 chr5 101131230 101131371 -98498779 + MIR SINE MIR 56 203 -59 518 136 0 0 chr5 101131627 101131715 -98498435 - L1MEc LINE L1 -5670 726 639 408 136 0 102 chr5 101131751 101131839 -98498311 + Tigger3(Golem) DNA MER2_type 2 80 -2949 410 176 27 0 chr5 101131972 101132046 -98498104 + Tigger3(Golem) DNA MER2_type 2921 2996 -33 2181 134 7 0 chr5 101132478 101132783 -98497367 + AluSx SINE Alu 1 307 -5 536 274 59 0 chr5 101133257 101133392 -98496758 + MIR SINE MIR 3 145 -117 210 167 24 0 chr5 101134002 101134044 -98496106 + (CA)n Simple_repeat Simple_repeat 2 44 0 452 247 106 47 chr5 101134422 101134657 -98495493 - L1ME4a LINE L1 -259 5862 5614 1373 215 25 14 chr5 101135637 101135991 -98494159 + MER31B LTR ERV1 1 358 -108 339 138 147 95 chr5 101135991 101136107 -98494043 + MER31-int LTR ERV1 3759 3880 -1056 596 161 8 8 chr5 101136115 101136233 -98493917 + MER31A LTR ERV1 365 482 -3 180 179 0 0 chr5 101137032 101137071 -98493079 + A-rich Low_complexity Low_complexity 1 39 0 534 288 26 37 chr5 101137123 101137314 -98492836 + MER5A DNA MER1_type 1 189 0 186 71 0 0 chr5 101137939 101137967 -98492183 + (TA)n Simple_repeat Simple_repeat 2 29 0 2188 122 0 23 chr5 101138136 101138440 -98491710 + AluSx SINE Alu 1 297 -15 797 260 29 33 chr5 101138711 101138953 -98491197 - MIR SINE MIR 0 262 22 1829 130 86 9 chr5 101140805 101141120 -98489030 - MER44D DNA MER2_type 0 609 1 2821 0 0 0 chr5 101141254 101141556 -98488594 - AluYa5 SINE Alu -9 302 1 413 266 42 21 chr5 101141557 101141749 -98488401 + HAL1b LINE L1 315 510 -838 298 209 35 52 chr5 101142515 101142630 -98487520 + L1ME4a LINE L1 5960 6072 -49 2390 92 0 19 chr5 101142634 101142950 -98487200 - AluSg SINE Alu 0 310 1 871 201 38 0 chr5 101143859 101144018 -98486132 + AluJb SINE Alu 135 299 -13 2151 108 0 16 chr5 101144150 101144456 -98485694 - AluSc SINE Alu -8 301 1 364 256 0 0 chr5 101145170 101145260 -98484890 + MER57A LTR ERV1 300 389 -14 2139 98 51 3 chr5 101145951 101146247 -98483903 - AluSg SINE Alu 0 310 1 21 0 0 0 chr5 101147236 101147257 -98482893 + AT_rich Low_complexity Low_complexity 1 21 0 1606 126 43 0 chr5 101148060 101148337 -98481813 - L1MA6 LINE L1 0 6300 6012 228 67 0 0 chr5 101148681 101148711 -98481439 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1186 227 56 40 chr5 101149343 101149739 -98480411 + MER93a LTR ERV1 1 402 0 2198 125 10 0 chr5 101150287 101150592 -98479558 - AluSx SINE Alu -4 308 1 458 192 77 15 chr5 101150614 101150744 -98479406 - L1MC4 LINE L1 0 8042 7905 261 57 0 0 chr5 101150767 101150802 -98479348 + (GA)n Simple_repeat Simple_repeat 2 36 0 197 429 45 0 chr5 101151340 101151473 -98478677 - MIR SINE MIR -6 256 118 2268 118 3 0 chr5 101152224 101152530 -98477620 + AluSg SINE Alu 1 307 -3 22 0 0 0 chr5 101152638 101152660 -98477490 + AT_rich Low_complexity Low_complexity 1 22 0 339 252 8 32 chr5 101152660 101152783 -98477367 + L1MB8 LINE L1 6023 6142 -36 546 270 40 17 chr5 101152999 101153173 -98476977 - MER5B DNA MER1_type 0 178 1 230 193 0 35 chr5 101153952 101154009 -98476141 + LTR33 LTR ERVL 116 170 -351 745 169 169 20 chr5 101154071 101154272 -98475878 + LTR33A LTR ERVL 266 496 -27 326 310 101 13 chr5 101154338 101154496 -98475654 + MIR SINE MIR 85 256 -6 216 135 0 0 chr5 101154849 101154886 -98475264 + (TG)n Simple_repeat Simple_repeat 1 37 0 2168 85 0 7 chr5 101154975 101155290 -98474860 - AluY SINE Alu 0 313 1 212 0 36 0 chr5 101156735 101156763 -98473387 + (TG)n Simple_repeat Simple_repeat 2 30 0 393 287 13 0 chr5 101157018 101157227 -98472923 + (TA)n Simple_repeat Simple_repeat 1 211 0 387 127 0 0 chr5 101157232 101157295 -98472855 + (TG)n Simple_repeat Simple_repeat 2 64 0 1415 184 18 25 chr5 101157514 101157840 -98472310 + MER33 DNA MER1_type 1 324 0 689 142 9 0 chr5 101158460 101158566 -98471584 + FLAM_C SINE Alu 1 107 -36 453 238 0 18 chr5 101158606 101158774 -98471376 + (TA)n Simple_repeat Simple_repeat 2 166 0 224 211 0 0 chr5 101158829 101158867 -98471283 + L2 LINE L2 3265 3302 -11 189 175 0 0 chr5 101159257 101159297 -98470853 + CT-rich Low_complexity Low_complexity 1 40 0 303 293 122 91 chr5 101159969 101160648 -98469502 + L1M2 LINE L1 684 1383 -5466 227 30 0 30 chr5 101160674 101160707 -98469443 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 1727 135 32 42 chr5 101161577 101161889 -98468261 - AluSx SINE Alu -3 309 1 205 315 37 56 chr5 101162526 101162634 -98467516 - L2 LINE L2 -17 3255 3150 2060 123 0 3 chr5 101163196 101163488 -98466662 + AluSx SINE Alu 6 296 -16 2072 142 30 6 chr5 101163648 101163986 -98466164 + Tigger1 DNA MER2_type 1 346 -2072 695 273 15 38 chr5 101164109 101164376 -98465774 + MIR SINE MIR 2 262 0 2215 102 0 7 chr5 101164911 101165206 -98464944 - AluSx SINE Alu -19 293 1 389 231 26 34 chr5 101166805 101166922 -98463228 + MER112 DNA MER1_type 1 116 -144 323 237 85 34 chr5 101167223 101167341 -98462809 + MER112 DNA MER1_type 137 260 0 327 306 115 25 chr5 101167442 101167599 -98462551 - L3b LINE CR1 -120 1463 1293 298 324 16 39 chr5 101168618 101168696 -98461454 + A-rich Low_complexity Low_complexity 2 80 -99 2302 106 3 10 chr5 101168696 101169008 -98461142 + AluSg SINE Alu 1 310 0 298 324 16 39 chr5 101169008 101169111 -98461039 + A-rich Low_complexity Low_complexity 80 179 0 387 284 116 0 chr5 101169414 101169569 -98460581 - MIR SINE MIR -43 219 47 358 279 71 19 chr5 101170896 101171050 -98459100 + MIR SINE MIR 15 176 -86 345 282 141 77 chr5 101171091 101171481 -98458669 + HAL1 LINE L1 20 434 -2073 331 274 92 46 chr5 101171502 101171655 -98458495 + HAL1 LINE L1 1168 1327 -1180 353 21 0 21 chr5 101172372 101172419 -98457731 + (CA)n Simple_repeat Simple_repeat 1 46 0 379 350 43 28 chr5 101172664 101172990 -98457160 - MLT1I LTR MaLR -8 401 71 658 262 84 15 chr5 101173046 101173248 -98456902 + MIR SINE MIR 46 261 -1 217 278 134 21 chr5 101173426 101173523 -98456627 - MIR SINE MIR -64 144 37 351 221 13 0 chr5 101174006 101174083 -98456067 - MER116 DNA Mariner -2 78 1 297 289 41 21 chr5 101174164 101174261 -98455889 - L2 LINE L2 -5 3308 3210 298 276 11 23 chr5 101174309 101174396 -98455754 + MIR SINE MIR 21 106 -156 249 33 0 0 chr5 101174402 101174432 -98455718 + (CA)n Simple_repeat Simple_repeat 1 30 0 1298 190 48 101 chr5 101175254 101175649 -98454501 - MLT1B LTR MaLR -16 374 1 23 0 0 0 chr5 101176344 101176367 -98453783 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr5 101176506 101176533 -98453617 + AT_rich Low_complexity Low_complexity 1 27 0 1126 288 67 30 chr5 101176594 101177163 -98452987 - L1MC4a LINE L1 -1875 5933 5344 29 47 0 0 chr5 101177350 101177393 -98452757 + AT_rich Low_complexity Low_complexity 1 43 0 27 29 0 0 chr5 101177565 101177599 -98452551 + AT_rich Low_complexity Low_complexity 1 34 0 537 332 128 31 chr5 101177744 101178190 -98451960 - L2 LINE L2 -5 3308 2820 989 206 24 4 chr5 101178961 101179214 -98450936 + L1MD3 LINE L1 7730 7987 -8 717 213 173 13 chr5 101179503 101179728 -98450422 - MER63 DNA MER1_type 0 1062 802 1379 310 62 51 chr5 101179953 101180482 -98449668 + L2 LINE L2 2179 2701 -612 2550 232 40 15 chr5 101180482 101181089 -98449061 + MLT1E3 LTR MaLR 3 624 0 1379 310 62 51 chr5 101181089 101181648 -98448502 + L2 LINE L2 2701 3283 -30 1546 97 0 0 chr5 101183886 101184113 -98446037 + L1PA13 LINE L1 5935 6161 -2 264 272 136 0 chr5 101184274 101184421 -98445729 - L1M4b LINE L1 -2102 4855 4689 25 31 0 0 chr5 101184427 101184459 -98445691 + AT_rich Low_complexity Low_complexity 1 32 0 843 281 118 46 chr5 101184679 101185641 -98444509 - L1M4b LINE L1 -2583 4374 3306 363 44 0 0 chr5 101185641 101185686 -98444464 + (CA)n Simple_repeat Simple_repeat 2 46 0 843 281 118 46 chr5 101185686 101185929 -98444221 - L1M4b LINE L1 -3651 3306 3082 344 268 149 31 chr5 101185966 101186203 -98443947 - L1M4b LINE L1 -3989 2968 2733 344 88 18 0 chr5 101186601 101186658 -98443492 + (TG)n Simple_repeat Simple_repeat 2 59 0 33 43 0 0 chr5 101186885 101186932 -98443218 + AT_rich Low_complexity Low_complexity 1 47 0 7287 39 10 1 chr5 101186932 101188503 -98441647 - L1PA4 LINE L1 -11 6144 4564 288 154 0 0 chr5 101189025 101189077 -98441073 + (TA)n Simple_repeat Simple_repeat 2 53 0 277 289 94 6 chr5 101189767 101189926 -98440224 - Charlie7 DNA MER1_type 0 2612 2440 478 235 60 42 chr5 101191272 101191489 -98438661 + L1MDa LINE L1 1441 1661 -4879 355 167 179 0 chr5 101191515 101191593 -98438557 + MLT1G LTR MaLR 478 569 -21 3474 119 47 2 chr5 101191623 101192160 -98437990 - L1PA11 LINE L1 -7 6167 5607 1659 191 88 116 chr5 101192160 101192318 -98437832 + L1MDa LINE L1 1649 1810 -4730 2193 123 3 0 chr5 101192318 101192628 -98437522 + AluSx SINE Alu 2 312 0 1659 191 88 116 chr5 101192628 101193450 -98436700 + L1MDa LINE L1 1810 2601 -3939 359 316 46 0 chr5 101193514 101193666 -98436484 + MER58 DNA MER1_type 2 160 -181 1151 58 19 19 chr5 101193672 101193827 -98436323 + AluY SINE Alu 1 155 -156 181 241 14 121 chr5 101194152 101194359 -98435791 - L2 LINE L2 -2593 721 537 385 304 146 23 chr5 101194364 101194624 -98435526 - L2 LINE L2 -2959 355 64 13276 62 11 2 chr5 101194752 101196546 -98433604 - L1P LINE L1 -3166 2980 1170 5903 82 1 22 chr5 101196539 101197472 -98432678 + L1P LINE L1 2966 3878 -2268 * 25 51 0 0 chr5 101197618 101197657 -98432493 + AT_rich Low_complexity Low_complexity 1 39 0 1535 268 55 62 chr5 101197692 101197828 -98432322 - L1M4b LINE L1 -4543 2416 2281 1615 224 70 0 chr5 101197828 101198198 -98431952 - MSTD LTR MaLR 0 396 1 1535 268 55 62 chr5 101198198 101198873 -98431277 - L1M4b LINE L1 -4678 2281 1603 207 0 0 0 chr5 101198873 101198896 -98431254 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 2301 76 6 38 chr5 101198897 101199239 -98430911 - L1PA7 LINE L1 -11 6143 5813 3021 147 16 8 chr5 101199245 101199748 -98430402 - L1PA16 LINE L1 -10 6156 5650 1535 268 55 62 chr5 101199748 101200135 -98430015 - L1M4b LINE L1 -5361 1598 1205 3815 117 56 72 chr5 101200400 101201613 -98428537 + pTR5 LTR ERV1 67 2438 0 489 286 55 14 chr5 101203171 101203391 -98426759 + L1M4 LINE L1 4106 4334 -1812 1335 263 94 22 chr5 101203684 101204366 -98425784 + L1 LINE L1 3043 3773 -2373 496 216 8 16 chr5 101204377 101204502 -98425648 + L1MB8 LINE L1 5833 5956 -222 45 34 0 0 chr5 101204916 101204975 -98425175 + AT_rich Low_complexity Low_complexity 1 59 0 231 36 0 0 chr5 101205025 101205053 -98425097 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2112 104 14 7 chr5 101207152 101207449 -98422701 - AluSc SINE Alu -10 299 1 277 263 13 0 chr5 101208474 101208550 -98421600 + MER103 DNA DNA 84 160 -6 1536 56 0 15 chr5 101208758 101208955 -98421195 + L1PA7 LINE L1 5945 6138 -16 652 25 67 0 chr5 101208959 101209078 -98421072 + (TA)n Simple_repeat Simple_repeat 1 127 0 260 217 0 12 chr5 101209111 101209194 -98420956 + (TA)n Simple_repeat Simple_repeat 2 83 0 24 0 0 0 chr5 101209913 101209937 -98420213 + AT_rich Low_complexity Low_complexity 1 24 0 2471 94 0 0 chr5 101210026 101210334 -98419816 + AluSc SINE Alu 1 308 -1 427 277 100 42 chr5 101211234 101211500 -98418650 + L2 LINE L2 2709 3001 -312 214 274 0 0 chr5 101211528 101211579 -98418571 - L2 LINE L2 0 3313 3263 378 198 245 0 chr5 101213095 101213201 -98416949 - MIR SINE MIR -33 229 98 22 35 0 0 chr5 101213545 101213574 -98416576 + AT_rich Low_complexity Low_complexity 1 29 0 2264 61 10 7 chr5 101214747 101215042 -98415108 - AluY SINE Alu -15 296 1 192 325 136 18 chr5 101215084 101215253 -98414897 - MIR SINE MIR -16 246 58 340 224 29 17 chr5 101217275 101217449 -98412701 + CT-rich Low_complexity Low_complexity 3 178 0 394 269 6 39 chr5 101217467 101217649 -98412501 + T-rich Low_complexity Low_complexity 2 177 0 430 318 144 57 chr5 101218055 101218435 -98411715 + L2 LINE L2 2343 2689 -624 2357 80 0 0 chr5 101218435 101218723 -98411427 - AluY SINE Alu -23 288 1 430 318 144 57 chr5 101218723 101219225 -98410925 + L2 LINE L2 2689 3311 -2 3566 149 24 56 chr5 101219755 101220098 -98410052 - L1P LINE L1 -3966 2180 1828 2344 115 0 0 chr5 101220098 101220410 -98409740 - AluSx SINE Alu 0 312 1 3566 149 24 56 chr5 101220410 101220803 -98409347 - L1P LINE L1 -4318 1828 1467 2712 293 45 34 chr5 101221222 101222137 -98408013 - L1M4b LINE L1 -5923 936 12 201 338 28 41 chr5 101223289 101223434 -98406716 + MIR SINE MIR 26 168 -94 294 221 39 10 chr5 101223609 101223713 -98406437 + (TA)n Simple_repeat Simple_repeat 2 108 0 264 267 120 26 chr5 101223753 101223944 -98406206 + L1ME2 LINE L1 4907 5115 -1031 364 198 2 50 chr5 101223969 101224066 -98406084 + AluJ/FLAM SINE Alu 2 73 -229 516 282 78 16 chr5 101224066 101224311 -98405839 + L1ME2 LINE L1 5752 6011 -153 586 194 29 0 chr5 101224326 101224465 -98405685 + L1MA10 LINE L1 6175 6317 -17 1707 139 20 0 chr5 101224647 101224899 -98405251 + AluSq SINE Alu 1 257 -56 189 74 0 0 chr5 101225353 101225380 -98404770 + (TATAA)n Simple_repeat Simple_repeat 5 31 0 1869 206 18 21 chr5 101226451 101226888 -98403262 + L1P3 LINE L1 31 466 -5409 262 193 25 76 chr5 101226924 101227043 -98403107 + A-rich Low_complexity Low_complexity 4 116 0 287 261 22 44 chr5 101227101 101227281 -98402869 + A-rich Low_complexity Low_complexity 2 177 0 1248 137 201 8 chr5 101230695 101230929 -98399221 + AluSg1 SINE Alu 1 279 -30 217 67 22 22 chr5 101231983 101232028 -98398122 + (CA)n Simple_repeat Simple_repeat 1 45 0 182 288 137 75 chr5 101232766 101232912 -98397238 + MIR3 SINE MIR 3 157 -51 242 317 16 32 chr5 101234241 101234364 -98395786 - MER20B DNA MER1_type -605 178 58 273 321 43 14 chr5 101234555 101234695 -98395455 + L2 LINE L2 2982 3125 -188 830 217 182 45 chr5 101235070 101235383 -98394767 + MSTB2 LTR MaLR 42 397 -60 8834 195 25 5 chr5 101235395 101237028 -98393122 + L1MA2 LINE L1 425 2089 -5476 444 236 29 21 chr5 101237204 101237344 -98392806 + AluSg/x SINE Alu 156 296 -13 3366 186 12 16 chr5 101237346 101239944 -98390206 + L1MA2 LINE L1 4848 7557 -16 447 12 75 0 chr5 101239951 101240031 -98390119 + (TA)n Simple_repeat Simple_repeat 2 87 0 330 87 0 0 chr5 101240098 101240144 -98390006 + (TA)n Simple_repeat Simple_repeat 2 47 0 24 0 0 0 chr5 101240861 101240885 -98389265 + AT_rich Low_complexity Low_complexity 1 24 0 2471 94 0 0 chr5 101240974 101241282 -98388868 + AluSc SINE Alu 1 308 -1 427 289 138 35 chr5 101242165 101242433 -98387717 + L2 LINE L2 2709 3002 -270 954 154 0 0 chr5 101244101 101244244 -98385906 - AluSg/x SINE Alu -14 296 154 630 154 19 0 chr5 101244350 101244454 -98385696 - AluSp SINE Alu -205 108 3 260 128 0 0 chr5 101244490 101244537 -98385613 - L1MA4A LINE L1 -23 6280 6234 4727 122 16 3 chr5 101244557 101245310 -98384840 - L1MA4A LINE L1 -180 6123 5361 951 236 75 79 chr5 101246206 101246676 -98383474 - MLT1D LTR MaLR 0 505 1 324 353 32 0 chr5 101246971 101247127 -98383023 + ERVL LTR ERVL 3212 3372 -2392 766 313 93 33 chr5 101247166 101247680 -98382470 + ERVL LTR ERVL 3425 3969 -1685 227 83 0 0 chr5 101247685 101247721 -98382429 - Charlie3 DNA MER1_type -2674 36 1 498 331 0 0 chr5 101247740 101247906 -98382244 + LTR16A LTR ERVL 285 450 0 4876 128 27 70 chr5 101248343 101248567 -98381583 - L1PB1 LINE L1 -132 6735 6503 291 54 0 0 chr5 101248567 101248604 -98381546 + (TG)n Simple_repeat Simple_repeat 2 38 0 2412 78 0 3 chr5 101248611 101248907 -98381243 - AluY SINE Alu -16 295 1 4876 128 27 70 chr5 101248907 101250056 -98380094 - L1PB1 LINE L1 -370 6497 5428 5808 183 14 11 chr5 101250065 101250285 -98379865 - L1PB1 LINE L1 -2738 4124 3906 2458 82 0 0 chr5 101250285 101250590 -98379560 - AluY SINE Alu -6 305 1 5808 183 14 11 chr5 101250590 101251691 -98378459 - L1PB1 LINE L1 -2956 3906 2801 * 7529 114 38 11 chr5 101251689 101253890 -98376260 - L1PB1 LINE L1 -4425 2438 34 878 171 166 0 chr5 101255205 101255410 -98374740 - L1MA7 LINE L1 -1 6290 6052 3071 144 19 21 chr5 101255443 101255976 -98374174 - L1PA16 LINE L1 -9 6157 5626 552 287 68 73 chr5 101256072 101256578 -98373572 + MLT1J LTR MaLR 5 450 0 719 231 120 43 chr5 101257306 101257803 -98372347 - LTR50 LTR ERVL -3 792 121 5758 200 59 32 chr5 101258412 101259949 -98370201 + L1M4 LINE L1 3605 5182 -964 665 205 58 6 chr5 101259921 101260077 -98370073 + L1MD3 LINE L1 7309 7472 -523 * 360 85 0 0 chr5 101260082 101260129 -98370021 - MSTA LTR MaLR -4 424 378 814 123 0 0 chr5 101260129 101260251 -98369899 - AluSp/q SINE Alu -13 300 179 2162 133 40 13 chr5 101260255 101260631 -98369519 - MSTA LTR MaLR -42 386 1 2100 181 68 42 chr5 101260632 101261136 -98369014 + L1MD3 LINE L1 7471 7987 -8 22 0 0 0 chr5 101261544 101261566 -98368584 + AT_rich Low_complexity Low_complexity 1 22 0 305 218 135 53 chr5 101261755 101261888 -98368262 + L1ME4a LINE L1 5974 6117 -4 344 293 40 0 chr5 101262940 101263039 -98367111 + MIR SINE MIR 143 245 -17 * 395 335 110 8 chr5 101263025 101263279 -98366871 - L2 LINE L2 -386 2928 2649 273 230 29 72 chr5 101264107 101264246 -98365904 + L1MC5 LINE L1 7725 7857 -104 943 164 58 39 chr5 101264582 101264789 -98365361 - MER20 DNA MER1_type -7 212 2 21 0 0 0 chr5 101264863 101264884 -98365266 + AT_rich Low_complexity Low_complexity 1 21 0 6040 149 10 9 chr5 101264898 101266706 -98363444 - L1PB1 LINE L1 0 6867 5061 1863 129 46 27 chr5 101266697 101267107 -98363043 - L1PB1 LINE L1 -4755 2108 1691 * 3690 220 63 7 chr5 101267208 101268109 -98362041 - L1PB1 LINE L1 -5906 957 6 30 27 0 0 chr5 101268163 101268200 -98361950 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr5 101268446 101268470 -98361680 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 101269354 101269378 -98360772 + AT_rich Low_complexity Low_complexity 1 24 0 1286 123 9 28 chr5 101269503 101269642 -98360508 - L1PA10 LINE L1 0 6168 6033 2537 97 109 7 chr5 101269642 101270045 -98360105 - MLT2A1 LTR ERVL 0 444 1 1286 123 9 28 chr5 101270045 101270117 -98360033 - L1PA10 LINE L1 -135 6033 5961 2833 137 2 4 chr5 101270217 101270706 -98359444 + L1P LINE L1 3028 3515 -2631 466 296 88 47 chr5 101270811 101270974 -98359176 + L2 LINE L2 2996 3176 -137 1456 174 48 70 chr5 101270974 101271347 -98358803 + MLT1A1 LTR MaLR 1 365 0 466 296 88 47 chr5 101271347 101271457 -98358693 + L2 LINE L2 3176 3280 -33 408 70 0 0 chr5 101271615 101271672 -98358478 - Alu SINE Alu -15 296 240 784 289 62 16 chr5 101271807 101272063 -98358087 + Charlie8 DNA MER1_type 20 287 -2130 357 182 52 0 chr5 101272567 101272644 -98357506 - MER96 DNA MER1_type? -4 171 91 1251 172 52 9 chr5 101272671 101272903 -98357247 + AluJo SINE Alu 39 280 -32 431 0 37 0 chr5 101272903 101272957 -98357193 + (TAAAA)n Simple_repeat Simple_repeat 5 60 0 25 0 0 0 chr5 101273124 101273149 -98357001 + AT_rich Low_complexity Low_complexity 1 25 0 2240 255 31 18 chr5 101273157 101273933 -98356217 - L1MEc LINE L1 -4929 1467 682 17621 33 2 1 chr5 101273943 101276835 -98353315 - L1PA4 LINE L1 -2 6153 3247 452 36 0 0 chr5 101276835 101276890 -98353260 + L1PA4 LINE L1 3201 3255 -2891 211 147 85 194 chr5 101276907 101277036 -98353114 - L2 LINE L2 -1251 2063 1949 22 0 0 0 chr5 101277623 101277645 -98352505 + AT_rich Low_complexity Low_complexity 1 22 0 42 36 0 0 chr5 101277717 101277773 -98352377 + AT_rich Low_complexity Low_complexity 1 56 0 1256 182 14 76 chr5 101277774 101277990 -98352160 - AluJo SINE Alu -39 273 78 3112 27 0 0 chr5 101277990 101278356 -98351794 - L1PA4 LINE L1 -1 6154 5789 1256 182 14 76 chr5 101278356 101278430 -98351720 - AluJo SINE Alu -234 78 1 308 291 23 28 chr5 101278597 101278742 -98351408 + MIR SINE MIR 45 191 -62 29 60 0 0 chr5 101280224 101280274 -98349876 + AT_rich Low_complexity Low_complexity 1 50 0 2076 117 0 10 chr5 101281373 101281671 -98348479 + AluSx SINE Alu 1 295 -17 269 196 0 0 chr5 101281753 101281799 -98348351 + MER69 DNA AcHobo 1 46 -131 799 210 110 11 chr5 101281826 101282107 -98348043 + MER69 DNA AcHobo 2164 2472 -54 22 35 0 0 chr5 101282292 101282321 -98347829 + AT_rich Low_complexity Low_complexity 1 29 0 698 209 146 29 chr5 101282970 101283176 -98346974 + MIR SINE MIR 33 262 0 1810 197 31 14 chr5 101283244 101283599 -98346551 - MLT1A1 LTR MaLR 0 365 5 1568 160 0 57 chr5 101284344 101284644 -98345506 - MER50 LTR ERV1 -19 715 433 1429 114 17 30 chr5 101284632 101284869 -98345281 - MER50 LTR ERV1 -500 234 1 * 406 229 78 33 chr5 101285522 101285675 -98344475 - MLT1E3 LTR MaLR -179 445 286 318 123 123 0 chr5 101285674 101285731 -98344419 + MLT1E3 LTR MaLR 561 624 0 * 294 275 0 25 chr5 101285967 101286047 -98344103 + MLT1K LTR MaLR 217 294 -294 42602 52 2 5 chr5 101287333 101293499 -98336651 - L1PA6 LINE L1 0 6154 8 1842 158 63 37 chr5 101293828 101294207 -98335943 - MLT1B LTR MaLR 0 390 2 191 161 0 0 chr5 101294918 101294949 -98335201 - L2 LINE L2 -2 3270 3240 311 282 169 8 chr5 101296000 101296124 -98334026 - L2 LINE L2 -2 3311 3168 43 20 0 0 chr5 101296124 101296174 -98333976 + AT_rich Low_complexity Low_complexity 1 50 0 353 205 0 120 chr5 101296846 101296963 -98333187 - MER46C DNA MER2_type 0 338 236 1995 137 7 0 chr5 101297059 101297352 -98332798 - AluSx SINE Alu -17 295 1 2401 72 0 28 chr5 101297937 101298257 -98331893 - AluY SINE Alu 0 311 1 393 22 0 0 chr5 101300103 101300149 -98330001 + (CA)n Simple_repeat Simple_repeat 2 47 0 6196 86 11 3 chr5 101301525 101302412 -98327738 + L1PA12 LINE L1 5273 6168 0 185 290 32 16 chr5 101303386 101303448 -98326702 - L2 LINE L2 -80 3233 3171 1176 109 119 10 chr5 101303470 101303671 -98326479 - MSTA LTR MaLR -2 426 204 934 123 127 106 chr5 101304271 101304563 -98325587 - MSTA LTR MaLR -130 298 1 23 33 0 0 chr5 101305098 101305128 -98325022 + AT_rich Low_complexity Low_complexity 1 30 0 373 283 0 0 chr5 101305642 101305734 -98324416 + MIR SINE MIR 60 151 -111 19435 170 35 32 chr5 101306649 101308188 -98321962 + L1M1 LINE L1 19 1551 -6014 1666 199 0 13 chr5 101308188 101308495 -98321655 - AluJb SINE Alu -9 303 1 19435 170 35 32 chr5 101308495 101313000 -98317150 + L1M1 LINE L1 1551 6076 -1489 1656 121 52 0 chr5 101313558 101313830 -98316320 - AluSx SINE Alu -16 296 11 1705 112 18 25 chr5 101313843 101314128 -98316022 - AluSx SINE Alu -9 303 21 208 203 0 94 chr5 101314226 101314290 -98315860 + L2 LINE L2 3218 3275 -38 582 287 45 78 chr5 101314640 101315379 -98314771 + HERVI LTR ERV1 4860 5573 -2212 579 268 120 25 chr5 101316364 101317055 -98313095 + L1M4 LINE L1 2717 3507 -2639 1913 108 3 32 chr5 101317055 101317369 -98312781 + AluSc SINE Alu 1 305 -4 307 273 80 7 chr5 101318523 101318673 -98311477 + L2 LINE L2 1951 2111 -1203 4957 177 51 14 chr5 101318933 101320048 -98310102 - L1P LINE L1 -1931 4215 3059 186 43 0 0 chr5 101320475 101320498 -98309652 + (A)n Simple_repeat Simple_repeat 1 23 0 1831 199 13 28 chr5 101320592 101320988 -98309162 + MLT1B LTR MaLR 1 390 0 249 307 28 84 chr5 101320988 101321041 -98309109 - MIR SINE MIR -68 194 140 1916 124 0 23 chr5 101321041 101321348 -98308802 - AluSc SINE Alu -9 300 1 249 307 28 84 chr5 101321348 101321462 -98308688 - MIR SINE MIR -122 140 34 1972 156 58 73 chr5 101321984 101322575 -98307575 - L1 LINE L1 -1350 4796 4215 1314 178 29 0 chr5 101322573 101322848 -98307302 + L1 LINE L1 4761 5043 -1103 * 837 98 144 16 chr5 101322849 101323043 -98307107 + AluY SINE Alu 1 219 -92 2276 80 0 10 chr5 101323884 101324185 -98305965 - AluSx SINE Alu -14 298 1 465 103 0 0 chr5 101324233 101324301 -98305849 + (TA)n Simple_repeat Simple_repeat 2 69 0 289 269 131 8 chr5 101324390 101324520 -98305630 + MIR SINE MIR 73 218 -44 809 293 60 84 chr5 101324916 101325458 -98304692 - L2 LINE L2 -249 3064 2553 2163 87 31 3 chr5 101325458 101325745 -98304405 + AluSc SINE Alu 1 295 -14 809 293 60 84 chr5 101325745 101326018 -98304132 - L2 LINE L2 -760 2553 2275 203 293 0 66 chr5 101327277 101327383 -98302767 + GA-rich Low_complexity Low_complexity 3 101 0 609 315 6 22 chr5 101328156 101328337 -98301813 + MER45A DNA AcHobo 1 178 0 5191 92 6 22 chr5 101328787 101329730 -98300420 + L1P2 LINE L1 4631 5558 -596 264 284 23 23 chr5 101330949 101331037 -98299113 - MIR SINE MIR -120 142 55 505 310 52 74 chr5 101334764 101335548 -98294602 + BaEV-int LTR ERV1 5281 6047 -602 247 308 39 31 chr5 101337003 101337133 -98293017 + L2 LINE L2 2715 2845 -469 244 208 52 21 chr5 101337279 101337375 -98292775 + L2 LINE L2 3078 3176 -137 357 82 0 0 chr5 101337666 101337715 -98292435 + (TA)n Simple_repeat Simple_repeat 1 49 0 944 186 25 69 chr5 101337812 101338173 -98291977 - L1MB8 LINE L1 -245 5933 5589 1091 188 18 45 chr5 101340089 101340312 -98289838 + MER20 DNA MER1_type 1 217 -2 262 260 110 75 chr5 101343105 101343251 -98286899 + MIR3 SINE MIR 31 181 -27 473 171 160 107 chr5 101343316 101343609 -98286541 - MER33 DNA MER1_type 0 363 2 297 0 0 0 chr5 101343706 101343739 -98286411 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 24 32 0 0 chr5 101343972 101344003 -98286147 + AT_rich Low_complexity Low_complexity 1 31 0 204 152 0 43 chr5 101344435 101344481 -98285669 + (AGGTG)n Simple_repeat Simple_repeat 1 44 0 23 0 0 0 chr5 101345633 101345656 -98284494 + AT_rich Low_complexity Low_complexity 1 23 0 216 0 0 0 chr5 101346061 101346085 -98284065 + (TTA)n Simple_repeat Simple_repeat 1 24 0 586 289 65 22 chr5 101346092 101346324 -98283826 - MIR SINE MIR -15 247 6 887 216 13 31 chr5 101346724 101346951 -98283199 - L1MC2 LINE L1 -250 6094 5872 809 234 56 21 chr5 101346947 101346973 -98283177 - L1MEc LINE L1 -4467 1985 1961 * 1996 138 6 6 chr5 101346973 101347284 -98282866 + AluSq SINE Alu 1 311 -2 809 234 56 21 chr5 101347284 101347542 -98282608 - L1MEc LINE L1 -4491 1961 1692 1668 94 33 0 chr5 101347552 101347797 -98282353 + AluSq SINE Alu 7 259 -54 1652 142 36 7 chr5 101348574 101348849 -98281301 + AluSx SINE Alu 1 283 -29 511 298 29 57 chr5 101349464 101349709 -98280441 - MIR SINE MIR 0 262 25 788 187 35 18 chr5 101349894 101350065 -98280085 - MER5B DNA MER1_type -4 174 1 393 231 29 29 chr5 101350210 101350314 -98279836 + MER5A DNA MER1_type 9 112 -77 203 356 67 31 chr5 101350474 101350668 -98279482 - L2 LINE L2 -492 2822 2622 434 236 201 6 chr5 101351785 101351959 -98278191 + Charlie8 DNA MER1_type 69 276 -2141 277 267 70 0 chr5 101352625 101352711 -98277439 + L2 LINE L2 3222 3313 0 1885 134 10 13 chr5 101354199 101354512 -98275638 + AluSx SINE Alu 1 312 0 990 50 8 0 chr5 101354923 101355044 -98275106 - AluY SINE Alu -189 122 1 333 259 14 129 chr5 101355182 101355274 -98274876 + MIR SINE MIR 66 136 -126 1572 194 3 31 chr5 101355274 101355568 -98274582 + AluJb SINE Alu 1 286 -26 333 259 14 129 chr5 101355568 101355622 -98274528 + MIR SINE MIR 136 195 -67 2079 103 10 33 chr5 101355684 101355986 -98274164 + AluSc SINE Alu 1 295 -14 292 263 10 50 chr5 101356117 101356216 -98273934 + LTR67 LTR ERVL 396 490 -67 742 170 43 7 chr5 101356363 101356504 -98273646 - AluJo SINE Alu -165 147 2 223 143 18 18 chr5 101357797 101357853 -98272297 + GA-rich Low_complexity Low_complexity 3 58 0 482 101 71 6 chr5 101358397 101358565 -98271585 + (TA)n Simple_repeat Simple_repeat 2 180 0 233 233 116 62 chr5 101358578 101358630 -98271520 - L1MA10 LINE L1 -24 6310 6259 868 239 41 102 chr5 101358630 101358876 -98271274 - L1ME2 LINE L1 -65 6099 5892 521 30 0 0 chr5 101358876 101358942 -98271208 - L1PA2 LINE L1 0 6155 6090 868 239 41 102 chr5 101358942 101359156 -98270994 - L1ME2 LINE L1 -272 5892 5667 312 313 2 72 chr5 101359355 101359543 -98270607 - MIR3 SINE MIR -61 147 9 256 293 12 12 chr5 101360051 101360133 -98270017 + CT-rich Low_complexity Low_complexity 3 84 0 582 284 52 64 chr5 101360892 101361142 -98269008 + MIR SINE MIR 10 256 -6 1016 175 27 54 chr5 101361519 101361742 -98268408 - MER20 DNA MER1_type -2 217 1 338 296 216 6 chr5 101364180 101364356 -98265794 - MIR SINE MIR -15 247 35 2236 92 0 30 chr5 101364435 101364739 -98265411 + AluSx SINE Alu 6 300 -12 395 303 109 29 chr5 101367223 101367398 -98262752 - MIR SINE MIR -48 214 26 8193 167 25 42 chr5 101368123 101369491 -98260659 - L1 LINE L1 -856 6709 5380 861 150 8 23 chr5 101369491 101369624 -98260526 - FLAM_C SINE Alu -2 131 1 8193 167 25 42 chr5 101369624 101370094 -98260056 - L1 LINE L1 -2185 5380 4903 6927 145 96 29 chr5 101372118 101373323 -98256827 - L1 LINE L1 -4802 2763 1451 1231 217 25 4 chr5 101373323 101373604 -98256546 + AluJb SINE Alu 1 287 -25 6927 145 96 29 chr5 101373604 101373791 -98256359 - L1 LINE L1 -6114 1451 1278 231 361 0 0 chr5 101374282 101374354 -98255796 - MIR SINE MIR -75 133 62 280 272 32 154 chr5 101374432 101374678 -98255472 + MIR SINE MIR 47 262 0 303 214 110 20 chr5 101375619 101375768 -98254382 - HAL1b LINE L1 -6 6115 1194 2120 124 13 0 chr5 101376506 101376813 -98253337 + AluSx SINE Alu 1 311 -1 1619 187 55 71 chr5 101377182 101377616 -98252534 - MLT1E3 LTR MaLR -197 427 1 230 281 11 0 chr5 101377632 101377721 -98252429 - L1MC4 LINE L1 -1338 6704 6615 201 203 47 0 chr5 101377946 101378010 -98252140 + (CTTTG)n Simple_repeat Simple_repeat 2 68 0 1141 204 61 25 chr5 101378758 101379200 -98250950 - L1 LINE L1 -2790 4775 4318 4638 155 18 25 chr5 101379238 101380139 -98250011 - L1 LINE L1 -4101 3464 2571 8032 17 22 6 chr5 101380141 101381565 -98248585 - L1PA3 LINE L1 0 6155 4716 7767 33 31 0 chr5 101381565 101382573 -98247577 + L1PA3 LINE L1 3658 4696 -1450 559 157 265 0 chr5 101382571 101382598 -98247552 - L1 LINE L1 -4977 2588 2569 * 261 75 0 0 chr5 101382598 101382638 -98247512 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 559 157 265 0 chr5 101382638 101382757 -98247393 - L1 LINE L1 -4996 2569 2403 9354 159 48 30 chr5 101382898 101385541 -98244609 - L1MA2 LINE L1 -295 6009 3319 1947 129 6 29 chr5 101385541 101385852 -98244298 - AluSx SINE Alu 0 312 9 9354 159 48 30 chr5 101385852 101385934 -98244216 - L1MA2 LINE L1 -2985 3319 3240 32186 47 8 5 chr5 101386034 101390085 -98240065 - L1P LINE L1 -2082 4064 4 2438 78 0 3 chr5 101390245 101390553 -98239597 + AluY SINE Alu 1 307 -4 38207 65 15 8 chr5 101391378 101396593 -98233557 - L1P LINE L1 -884 5262 13 22 70 0 0 chr5 101396606 101396649 -98233501 + AT_rich Low_complexity Low_complexity 1 43 0 255 326 22 23 chr5 101396997 101397143 -98233007 - LTR16A1 LTR ERVL 0 457 304 643 138 0 0 chr5 101397557 101397644 -98232506 - AluJ/FLAM SINE Alu -223 89 3 612 253 83 29 chr5 101397683 101398249 -98231901 - L1ME LINE L1 -474 5696 5108 5645 78 13 4 chr5 101398258 101398940 -98231210 - LTR12 LTR ERV1 0 688 1 54137 87 12 8 chr5 101398940 101406840 -98223310 - HERV9 LTR ERV1 0 8399 382 1502 98 123 13 chr5 101406840 101407076 -98223074 - HERV9 LTR ERV1 -8137 262 1 6736 73 8 17 chr5 101407077 101407909 -98222241 - LTR12 LTR ERV1 -1 825 1 373 280 116 43 chr5 101408070 101408181 -98221969 - L1ME LINE L1 -1304 4842 4741 2051 139 144 3 chr5 101408181 101408555 -98221595 - MSTA LTR MaLR -1 427 1 373 280 116 43 chr5 101408555 101408772 -98221378 - L1ME LINE L1 -1405 4741 4490 549 223 33 8 chr5 101408875 101408996 -98221154 + L2 LINE L2 3190 3313 0 307 325 106 29 chr5 101409254 101409500 -98220650 - L1ME LINE L1 -2066 4080 3816 206 64 0 85 chr5 101409794 101409841 -98220309 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 207 167 42 0 chr5 101410040 101410088 -98220062 + A-rich Low_complexity Low_complexity 3 52 0 486 328 65 0 chr5 101410415 101410616 -98219534 + LTR33 LTR ERVL 255 468 -53 1609 118 14 38 chr5 101410842 101411130 -98219020 + L1MA2 LINE L1 6024 6304 0 2025 158 85 36 chr5 101411586 101412035 -98218115 + HSMAR2 DNA Mariner 1 471 -831 * 3983 108 111 3 chr5 101412010 101412649 -98217501 + HSMAR2 DNA Mariner 595 1302 0 24 0 0 0 chr5 101412994 101413018 -98217132 + AT_rich Low_complexity Low_complexity 1 24 0 3532 211 50 32 chr5 101415047 101415854 -98214296 - MER21B LTR ERV1 -9 854 34 1665 195 160 12 chr5 101415900 101416300 -98213850 - MLT1D LTR MaLR -46 459 1 23 0 0 0 chr5 101416799 101416822 -98213328 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 101417235 101417256 -98212894 + (TTA)n Simple_repeat Simple_repeat 1 21 0 713 311 51 4 chr5 101417260 101417495 -98212655 - MIR SINE MIR -11 251 6 23 97 0 0 chr5 101418486 101418558 -98211592 + AT_rich Low_complexity Low_complexity 1 72 0 194 150 25 0 chr5 101418600 101418640 -98211510 + CT-rich Low_complexity Low_complexity 4 44 0 7851 169 23 1 chr5 101418641 101420385 -98209765 - L1PA13 LINE L1 -1 6813 5024 294 29 0 0 chr5 101420385 101420420 -98209730 + (TG)n Simple_repeat Simple_repeat 1 35 0 7851 169 23 1 chr5 101420420 101420939 -98209211 - L1PA13 LINE L1 -1790 5024 4518 11325 164 24 82 chr5 101421053 101424356 -98205794 - L1PA13 LINE L1 -2243 4554 1439 1700 87 8 8 chr5 101424359 101424612 -98205538 + L1MA4A LINE L1 6047 6299 -4 575 214 162 13 chr5 101424613 101424842 -98205308 + L1MEc LINE L1 814 1076 -5320 204 184 13 40 chr5 101424912 101424988 -98205162 + (TATG)n Simple_repeat Simple_repeat 2 75 0 1582 207 34 14 chr5 101425079 101425437 -98204713 - MLT2D LTR ERVL -49 365 1 453 229 77 18 chr5 101425437 101425607 -98204543 + L1MEc LINE L1 1074 1253 -5143 863 331 107 45 chr5 101425608 101425701 -98204449 + L2 LINE L2 1922 2008 -1306 2511 71 0 0 chr5 101425701 101426011 -98204139 - AluY SINE Alu -1 310 1 863 331 107 45 chr5 101426011 101426733 -98203417 + L2 LINE L2 2008 2787 -527 291 114 0 0 chr5 101427023 101427067 -98203083 + (T)n Simple_repeat Simple_repeat 1 44 0 416 323 102 36 chr5 101427178 101427481 -98202669 + L2 LINE L2 2594 2916 -398 2278 147 23 33 chr5 101427603 101428310 -98201840 + L1P4 LINE L1 4950 5651 -523 212 309 143 0 chr5 101428339 101428365 -98201785 + L2 LINE L2 1780 1801 -1513 360 0 0 0 chr5 101428365 101428405 -98201745 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 212 309 143 0 chr5 101428405 101428504 -98201646 + L2 LINE L2 1801 1923 -1391 857 226 77 0 chr5 101428800 101429097 -98201053 - MER33 DNA MER1_type -4 320 1 1572 131 128 16 chr5 101429308 101429613 -98200537 + MER44D DNA MER2_type 1 609 0 2014 145 3 0 chr5 101431619 101431915 -98198235 - AluSg SINE Alu -13 297 1 2840 176 65 10 chr5 101432009 101432105 -98198045 - L1MA4 LINE L1 -7 6149 6054 1404 199 46 173 chr5 101432105 101432960 -98197190 - L1PA2 LINE L1 -95 6060 5315 13102 196 30 10 chr5 101432968 101436832 -98193318 - L1PA14 LINE L1 -10 6151 2221 1423 75 0 0 chr5 101436845 101437018 -98193132 - AluY SINE Alu -10 301 129 1407 199 58 24 chr5 101437019 101437430 -98192720 - L1MA4 LINE L1 -817 5329 4905 1149 192 122 58 chr5 101437724 101438067 -98192083 - MLT1A1 LTR MaLR 0 365 1 450 279 29 0 chr5 101438516 101438688 -98191462 - MER104 DNA Tc2 0 180 4 201 74 0 0 chr5 101438997 101439024 -98191126 + (A)n Simple_repeat Simple_repeat 1 27 0 24 0 0 0 chr5 101439130 101439154 -98190996 + AT_rich Low_complexity Low_complexity 1 24 0 387 306 81 0 chr5 101439255 101439415 -98190735 + MIR SINE MIR 89 261 -1 372 264 54 108 chr5 101439642 101439809 -98190341 + MIR SINE MIR 20 177 -85 14984 207 97 71 chr5 101439925 101442272 -98187878 - L1MA3 LINE L1 -14 6291 4008 804 164 0 22 chr5 101442272 101442406 -98187744 - FLAM_C SINE Alu -2 131 1 14984 207 97 71 chr5 101442406 101446182 -98183968 - L1MA3 LINE L1 -2297 4008 1 23 0 0 0 chr5 101447694 101447717 -98182433 + AT_rich Low_complexity Low_complexity 1 23 0 21517 170 21 11 chr5 101447780 101451103 -98179047 + L1M1 LINE L1 5 3291 -4274 2025 127 75 23 chr5 101451103 101451449 -98178701 - THE1B LTR MaLR 0 364 1 11222 106 8 1 chr5 101451449 101453019 -98177131 - THE1B-int LTR MaLR 0 1580 1 2007 143 79 18 chr5 101453019 101453362 -98176788 - THE1B LTR MaLR 0 364 1 21517 170 21 11 chr5 101453362 101454608 -98175542 + L1M1 LINE L1 3290 4621 -2944 1994 60 0 42 chr5 101454612 101454897 -98175253 + L1P LINE L1 2083 2355 -3791 4928 118 47 40 chr5 101454899 101455844 -98174306 - L1MA1 LINE L1 -62 6240 5290 744 217 30 4 chr5 101455970 101456200 -98173950 - L1 LINE L1 -3012 4553 4318 4504 157 17 24 chr5 101456238 101457139 -98173011 - L1 LINE L1 -4101 3464 2571 7181 23 13 3 chr5 101457141 101458568 -98171582 - L1PA3 LINE L1 0 6155 4716 * 8371 31 0 0 chr5 101458566 101459607 -98170543 + L1PA3 LINE L1 3656 4696 -1450 261 75 0 0 chr5 101459632 101459672 -98170478 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 5373 194 41 74 chr5 101459672 101461622 -98168528 - L1 LINE L1 -5027 2538 17 2134 117 10 0 chr5 101461646 101461946 -98168204 - AluSg SINE Alu -7 303 1 2646 164 95 34 chr5 101461997 101462557 -98167593 - LTR9 LTR ERV1 -18 594 1 24 32 0 0 chr5 101462590 101462621 -98167529 + AT_rich Low_complexity Low_complexity 1 31 0 6591 54 3 0 chr5 101462697 101463985 -98166165 - L1PA5 LINE L1 0 6154 4830 4335 120 250 72 chr5 101463985 101465311 -98164839 + pTR5 LTR ERV1 744 2438 0 31157 71 6 2 chr5 101465312 101469681 -98160469 - L1P LINE L1 -1310 4836 448 33068 78 6 1 chr5 101469833 101474487 -98155663 - L1P LINE L1 -1457 4689 13 22 70 0 0 chr5 101474500 101474543 -98155607 + AT_rich Low_complexity Low_complexity 1 43 0 609 138 0 0 chr5 101475451 101475538 -98154612 - AluJ/FLAM SINE Alu -223 89 3 448 266 87 29 chr5 101475577 101476136 -98154014 - L1ME LINE L1 -474 5696 5113 5435 67 1 27 chr5 101476148 101476854 -98153296 - LTR12 LTR ERV1 0 688 1 51314 86 9 8 chr5 101476854 101484779 -98145371 - HERV9 LTR ERV1 0 8399 382 1355 114 14 14 chr5 101484779 101484999 -98145151 - HERV9 LTR ERV1 -8137 262 43 6301 77 6 17 chr5 101485016 101485850 -98144300 - LTR12 LTR ERV1 -1 825 1 298 280 116 43 chr5 101486011 101486122 -98144028 - L1ME LINE L1 -1304 4842 4741 2062 139 144 3 chr5 101486122 101486496 -98143654 - MSTA LTR MaLR -1 427 1 298 280 116 43 chr5 101486496 101486713 -98143437 - L1ME LINE L1 -1405 4741 4490 549 223 33 8 chr5 101486816 101486937 -98143213 + L2 LINE L2 3190 3313 0 206 64 0 85 chr5 101487733 101487780 -98142370 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 207 167 42 0 chr5 101487985 101488033 -98142117 + A-rich Low_complexity Low_complexity 3 52 0 458 311 94 8 chr5 101488348 101488615 -98141535 + LTR33 LTR ERVL 230 519 -2 565 294 9 23 chr5 101489252 101489470 -98140680 + L1ME LINE L1 5428 5642 -522 297 289 100 34 chr5 101490202 101490441 -98139709 - MLT1L LTR MaLR -360 255 1 2268 102 7 0 chr5 101490856 101491149 -98139001 - AluSx SINE Alu -16 296 2 238 227 76 0 chr5 101491227 101491293 -98138857 - HAL1 LINE L1 -20 2487 2417 204 200 107 27 chr5 101491336 101491411 -98138739 + MER91C DNA MER1_type 38 118 -22 571 286 69 61 chr5 101491426 101492079 -98138071 - HAL1 LINE L1 -133 2374 1717 305 336 112 8 chr5 101492114 101492239 -98137911 - L2 LINE L2 -211 3061 2924 1472 169 48 4 chr5 101492401 101492649 -98137501 + AluJb SINE Alu 41 299 -13 325 333 78 50 chr5 101492733 101493132 -98137018 - L2 LINE L2 -609 2705 2296 216 0 0 0 chr5 101493990 101494014 -98136136 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 345 186 0 0 chr5 101494423 101494482 -98135668 - L2 LINE L2 0 3313 3255 216 0 0 0 chr5 101496197 101496221 -98133929 + (GA)n Simple_repeat Simple_repeat 1 24 0 17563 94 15 2 chr5 101496397 101499777 -98130373 - L1PA7 LINE L1 0 6154 2740 7348 40 0 12 chr5 101499797 101501206 -98128944 - L1PA4 LINE L1 -5 6150 4750 7859 124 4 0 chr5 101501206 101502469 -98127681 - L1PA7 LINE L1 -3394 2752 1485 13264 184 27 15 chr5 101502569 101504801 -98125349 - L1M1 LINE L1 -720 7001 4718 2075 125 3 26 chr5 101504801 101505112 -98125038 - AluSx SINE Alu 0 312 9 13264 184 27 15 chr5 101505112 101506279 -98123871 - L1M1 LINE L1 -3003 4718 3566 * 15985 194 23 30 chr5 101506262 101512373 -98117777 - L1PA13 LINE L1 -12 7589 711 15055 166 35 62 chr5 101512476 101513126 -98117024 - L1M1 LINE L1 -4411 3154 2488 950 59 0 0 chr5 101513126 101513244 -98116906 - AluY SINE Alu -7 304 187 15055 166 35 62 chr5 101513244 101515704 -98114446 - L1M1 LINE L1 -5077 2488 15 11393 136 35 22 chr5 101515908 101516917 -98113233 - Tigger1 DNA MER2_type -4 2414 1420 6862 61 7 6 chr5 101516917 101517867 -98112283 + L1PA7 LINE L1 5203 6154 0 11393 136 35 22 chr5 101517867 101518392 -98111758 - Tigger1 DNA MER2_type -998 1420 846 2058 144 0 0 chr5 101518392 101518691 -98111459 - AluSc SINE Alu -10 299 1 11393 136 35 22 chr5 101518691 101519083 -98111067 - Tigger1 DNA MER2_type -1572 846 461 2038 196 13 0 chr5 101519085 101519468 -98110682 + L1P LINE L1 3943 4330 -1816 195 338 108 0 chr5 101519476 101519550 -98110600 + L2 LINE L2 3231 3312 -1 23 54 0 0 chr5 101520429 101520466 -98109684 + AT_rich Low_complexity Low_complexity 1 37 0 1242 290 119 13 chr5 101521095 101521951 -98108199 - L2 LINE L2 0 3313 2367 443 295 0 0 chr5 101522064 101522176 -98107974 + MER63A DNA MER1_type 94 205 -5 862 181 6 35 chr5 101523165 101523336 -98106814 + MER3 DNA MER1_type 44 209 0 605 263 26 0 chr5 101523350 101523502 -98106648 + MER105 DNA DNA 8 163 -41 839 247 26 37 chr5 101523545 101523816 -98106334 - L1ME3 LINE L1 -133 6029 5762 555 247 133 0 chr5 101523805 101524084 -98106066 - L1M4 LINE L1 -2725 3421 3106 * 21 0 0 0 chr5 101524133 101524154 -98105996 + AT_rich Low_complexity Low_complexity 1 21 0 267 318 95 16 chr5 101524189 101524315 -98105835 - L2 LINE L2 0 3272 3137 793 174 0 8 chr5 101524340 101524472 -98105678 + FLAM_A SINE Alu 1 131 -2 1940 102 51 0 chr5 101526623 101526898 -98103252 + AluSg SINE Alu 16 304 -6 2264 82 3 55 chr5 101527501 101527831 -98102319 + AluSp SINE Alu 1 313 0 1648 94 20 4 chr5 101527920 101528174 -98101976 + L1PA15-16 LINE L1 1781 2038 -4811 * 8020 231 26 4 chr5 101528171 101530247 -98099903 + L1 LINE L1 2955 5076 -1773 1379 58 6 0 chr5 101530249 101530423 -98099727 + L1PA10 LINE L1 5990 6164 -4 4698 116 24 40 chr5 101530424 101530481 -98099669 + L1PA16 LINE L1 5384 5440 -726 1544 137 59 23 chr5 101530481 101530737 -98099413 + AluSx SINE Alu 24 288 -24 2354 64 3 0 chr5 101530747 101531067 -98099083 + AluY SINE Alu 1 321 0 4698 116 24 40 chr5 101531067 101531793 -98098357 + L1PA16 LINE L1 5449 6166 0 353 380 114 15 chr5 101531917 101532395 -98097755 + L1ME LINE L1 5255 5778 -386 298 271 102 55 chr5 101532768 101533023 -98097127 - HAL1 LINE L1 -13 2494 2228 1092 163 69 100 chr5 101533023 101533396 -98096754 + MLT2B1 LTR ERVL 1 378 -36 827 25 17 17 chr5 101533396 101533516 -98096634 + (TCTA)n Simple_repeat Simple_repeat 2 121 0 1092 163 69 100 chr5 101533516 101533552 -98096598 + MLT2B1 LTR ERVL 378 414 0 340 313 96 42 chr5 101533739 101534052 -98096098 - MLT1L LTR MaLR -81 534 205 461 213 92 62 chr5 101534057 101534329 -98095821 - HAL1 LINE L1 -1271 1236 957 2007 153 26 46 chr5 101534446 101534837 -98095313 - MLT1B LTR MaLR -5 385 3 1489 270 40 14 chr5 101535123 101535545 -98094605 - LTR16A LTR ERVL 0 450 18 559 253 81 20 chr5 101536698 101536896 -98093254 + MER112 DNA MER1_type 51 260 0 359 218 75 68 chr5 101537750 101537883 -98092267 + MER103 DNA DNA 13 146 -20 413 311 66 7 chr5 101538004 101538155 -98091995 - MIR SINE MIR -80 182 23 183 85 64 21 chr5 101538522 101538569 -98091581 + T-rich Low_complexity Low_complexity 3 51 0 7771 20 20 0 chr5 101538574 101539726 -98090424 - L1PA3 LINE L1 0 6155 4996 25 83 0 0 chr5 101539908 101539968 -98090182 + AT_rich Low_complexity Low_complexity 1 60 0 511 311 89 21 chr5 101540579 101540814 -98089336 - MIR SINE MIR 0 262 12 28 0 0 0 chr5 101541007 101541035 -98089115 + AT_rich Low_complexity Low_complexity 1 28 0 380 288 50 56 chr5 101541296 101541494 -98088656 + MER117 DNA MER1_type 1 197 0 2226 123 0 0 chr5 101542511 101542820 -98087330 - AluY SINE Alu -2 309 1 316 304 22 0 chr5 101542924 101543016 -98087134 - LTR67 LTR ERVL -36 521 428 326 223 68 19 chr5 101543042 101543145 -98087005 + L1MC5 LINE L1 7423 7530 -431 281 285 30 67 chr5 101543232 101543397 -98086753 + L1ME3A LINE L1 5959 6117 -53 314 225 142 58 chr5 101544285 101544405 -98085745 + MLT1K LTR MaLR 443 572 -16 239 322 26 0 chr5 101544878 101544993 -98085157 + MLT1E-int LTR MaLR 1254 1371 0 780 180 21 25 chr5 101544993 101545183 -98084967 + MLT1E LTR MaLR 1 186 -356 429 224 0 0 chr5 101545393 101545478 -98084672 - MLT2F LTR ERVL -576 87 3 469 230 32 0 chr5 101545481 101545607 -98084543 - L1MC5 LINE L1 -873 7088 6959 * 2694 179 26 19 chr5 101545599 101546180 -98083970 - L1MC3 LINE L1 0 7785 7201 240 302 35 12 chr5 101546194 101546280 -98083870 - MLT1F1 LTR MaLR -443 124 37 330 148 0 0 chr5 101546281 101546335 -98083815 - L1MC3 LINE L1 -687 7098 7045 2186 93 3 3 chr5 101546338 101546627 -98083523 - AluSg SINE Alu -15 295 7 2012 213 13 30 chr5 101546675 101547121 -98083029 - L1MC3 LINE L1 -1767 6018 5579 2064 187 84 22 chr5 101547121 101547571 -98082579 + MER66A LTR ERV1 1 478 0 2012 213 13 30 chr5 101547571 101547588 -98082562 - L1MC3 LINE L1 -2206 5579 5563 6838 177 50 31 chr5 101547591 101549562 -98080588 + MER66A-int LTR ERV1 67 2162 -4514 5193 232 84 72 chr5 101549532 101551661 -98078489 + MER66A-int LTR ERV1 2315 4469 -2207 * 1681 209 60 6 chr5 101551661 101552025 -98078125 + MER66A LTR ERV1 95 478 0 791 152 58 0 chr5 101552025 101552163 -98077987 - L1MC3 LINE L1 -2204 5581 5436 2146 198 71 48 chr5 101552169 101552729 -98077421 - MER34C LTR ERV1 -12 573 1 4067 229 36 29 chr5 101552731 101552808 -98077342 - L1MC3 LINE L1 -746 5400 5325 1407 230 91 62 chr5 101552808 101553434 -98076716 - LTR48B LTR ERV1 0 644 1 4067 229 36 29 chr5 101553434 101554762 -98075388 - L1MC3 LINE L1 -821 5325 4019 2106 183 128 81 chr5 101554762 101554970 -98075180 + LTR8A LTR ERV1 1 198 -529 3612 53 0 2 chr5 101554970 101555419 -98074731 - LTR7 LTR ERV1 -2 448 1 2106 183 128 81 chr5 101555419 101555903 -98074247 + LTR8A LTR ERV1 198 726 -1 1689 211 126 21 chr5 101555912 101556484 -98073666 - L1MC3 LINE L1 -2133 4013 3382 2528 214 118 1 chr5 101556497 101557151 -98072999 + LTR48 LTR ERV1 22 751 -36 1967 251 21 9 chr5 101557194 101557863 -98072287 - L1MC3 LINE L1 -2767 3379 2703 321 360 7 60 chr5 101557899 101558049 -98072101 + L2 LINE L2 3115 3256 -16 1190 232 112 3 chr5 101558315 101558600 -98071550 + MSTB2 LTR MaLR 1 316 -141 206 318 95 54 chr5 101559552 101559700 -98070450 + MIR SINE MIR 59 212 -50 21 0 0 0 chr5 101560179 101560200 -98069950 + AT_rich Low_complexity Low_complexity 1 21 0 263 332 49 104 chr5 101561063 101561370 -98068780 - L2 LINE L2 -50 3222 2933 183 342 132 26 chr5 101561408 101561598 -98068552 - L2 LINE L2 -467 2847 2638 2346 211 65 147 chr5 101561606 101563487 -98066663 - MER52A LTR ERV1 0 1755 29 2744 122 104 52 chr5 101563487 101564073 -98066077 + pTR5 LTR ERV1 1231 2025 -413 308 268 10 0 chr5 101564074 101564171 -98065979 + LTR30 LTR ERV1 545 642 -80 1543 74 0 9 chr5 101564174 101564390 -98065760 + pTR5 LTR ERV1 172 385 -2053 660 258 13 0 chr5 101564391 101564542 -98065608 - MER52A LTR ERV1 -1228 527 375 * 721 208 40 104 chr5 101564532 101564782 -98065368 - MER52A LTR ERV1 -1520 235 2 308 323 16 31 chr5 101565080 101565207 -98064943 + MIR3 SINE MIR 44 168 -40 1529 134 11 4 chr5 101565275 101565543 -98064607 + L1MA5A LINE L1 6023 6292 -5 22 35 0 0 chr5 101566541 101566570 -98063580 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr5 101569641 101569673 -98060477 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 101570025 101570053 -98060097 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 101570720 101570743 -98059407 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 101570989 101571021 -98059129 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr5 101571212 101571242 -98058908 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5 101571443 101571471 -98058679 + AT_rich Low_complexity Low_complexity 1 28 0 181 280 80 0 chr5 101571471 101571521 -98058629 - L2 LINE L2 -4 3268 3215 234 329 14 0 chr5 101572457 101572527 -98057623 + L2 LINE L2 3201 3271 -1 359 161 0 25 chr5 101573177 101573258 -98056892 + CT-rich Low_complexity Low_complexity 4 82 0 288 0 0 0 chr5 101573575 101573607 -98056543 + (CA)n Simple_repeat Simple_repeat 2 33 0 1641 81 9 9 chr5 101573676 101573899 -98056251 - AluSg/x SINE Alu -4 308 86 22 56 0 0 chr5 101574500 101574536 -98055614 + AT_rich Low_complexity Low_complexity 1 36 0 301 218 83 115 chr5 101574826 101574982 -98055168 + MIR SINE MIR 41 191 -71 777 240 29 0 chr5 101575363 101575538 -98054612 + LTR16C LTR ERVL 310 489 -2 316 383 24 0 chr5 101575739 101575906 -98054244 - L2 LINE L2 -235 3037 2867 1633 292 57 57 chr5 101576533 101577115 -98053035 + MER115 DNA AcHobo 111 692 -1 829 204 12 12 chr5 101578774 101578936 -98051214 - FRAM SINE Alu -14 162 1 275 237 76 51 chr5 101579359 101579477 -98050673 - LTR50 LTR ERVL -633 162 42 2859 304 65 21 chr5 101579566 101580708 -98049442 - ERVL LTR ERVL -2428 3336 2145 985 205 15 10 chr5 101580807 101581002 -98049148 - LTR52 LTR ERVL -9 412 217 3394 113 30 69 chr5 101581012 101581425 -98048725 - L1MA8 LINE L1 -118 6173 5792 3952 54 104 0 chr5 101581425 101581964 -98048186 - L1PA6 LINE L1 -1 6153 5559 3394 113 30 69 chr5 101581964 101582190 -98047960 - L1MA8 LINE L1 -499 5792 5559 718 195 130 20 chr5 101582191 101582391 -98047759 - LTR52 LTR ERVL -199 222 1 24 0 0 0 chr5 101582663 101582687 -98047463 + AT_rich Low_complexity Low_complexity 1 24 0 266 333 0 9 chr5 101583146 101583260 -98046890 - ERVL LTR ERVL -4496 1158 1046 1682 186 84 43 chr5 101583348 101583790 -98046360 - L1ME1 LINE L1 -133 6033 5574 328 314 88 6 chr5 101583835 101583994 -98046156 - ERVL LTR ERVL -4719 1045 874 368 279 140 44 chr5 101585527 101585776 -98044374 + MER102a DNA MER1_type 45 330 0 22 0 0 0 chr5 101587338 101587360 -98042790 + AT_rich Low_complexity Low_complexity 1 22 0 519 254 8 67 chr5 101587428 101587562 -98042588 + MIR SINE MIR 2 127 -135 236 260 40 70 chr5 101588226 101588326 -98041824 + L2 LINE L2 2595 2691 -623 1713 180 0 10 chr5 101588386 101588686 -98041464 - AluJo SINE Alu 0 312 16 233 356 153 28 chr5 101589500 101589820 -98040330 + L2 LINE L2 2947 3306 -7 25 0 0 0 chr5 101589849 101589874 -98040276 + AT_rich Low_complexity Low_complexity 1 25 0 29 28 0 0 chr5 101590340 101590376 -98039774 + AT_rich Low_complexity Low_complexity 1 36 0 295 295 0 25 chr5 101591141 101591263 -98038887 + L1MA9 LINE L1 6156 6274 -38 195 339 18 36 chr5 101592956 101593068 -98037082 + MIR SINE MIR 83 192 -70 208 378 82 30 chr5 101593115 101593250 -98036900 + L2 LINE L2 3129 3270 -2 465 332 18 62 chr5 101593300 101593526 -98036624 - L2 LINE L2 0 3272 3057 308 267 111 47 chr5 101593730 101593902 -98036248 + L2 LINE L2 3123 3305 -8 184 216 27 0 chr5 101594795 101594832 -98035318 + L2 LINE L2 3268 3305 -8 26 50 0 0 chr5 101595428 101595468 -98034682 + AT_rich Low_complexity Low_complexity 1 40 0 276 30 0 0 chr5 101597030 101597063 -98033087 + (TG)n Simple_repeat Simple_repeat 1 33 0 183 80 0 0 chr5 101597063 101597088 -98033062 + (GA)n Simple_repeat Simple_repeat 2 26 0 1367 200 62 25 chr5 101597149 101597469 -98032681 - MLT1A2 LTR MaLR -42 332 1 203 132 53 0 chr5 101597517 101597555 -98032595 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 555 242 118 0 chr5 101598343 101598496 -98031654 + MER112 DNA MER1_type 89 259 -1 817 163 0 0 chr5 101599528 101599657 -98030493 + FLAM_C SINE Alu 3 131 -2 13274 149 15 14 chr5 101599781 101602049 -98028101 - L1PA12 LINE L1 -4266 3318 1039 6339 87 13 0 chr5 101602049 101603503 -98026647 + L1PA14 LINE L1 4718 6158 -3 378 233 68 14 chr5 101603504 101603650 -98026500 - HAL1b LINE L1 -17 1331 1178 2022 125 0 0 chr5 101603927 101604207 -98025943 + AluSg SINE Alu 1 280 -30 253 299 110 29 chr5 101604235 101604516 -98025634 + L1ME4a LINE L1 5694 5997 -124 386 326 68 24 chr5 101605387 101605662 -98024488 + MER90 LTR ERV1 302 563 -12 1575 269 23 5 chr5 101606468 101606854 -98023296 - L1PA12 LINE L1 -6152 1429 1037 * 2976 175 13 21 chr5 101606852 101607890 -98022260 + L1P4 LINE L1 4718 5738 -423 276 30 0 0 chr5 101608903 101608936 -98021214 + (TG)n Simple_repeat Simple_repeat 1 33 0 189 107 0 0 chr5 101608936 101608964 -98021186 + (GA)n Simple_repeat Simple_repeat 2 29 0 434 242 0 24 chr5 101609031 101609155 -98020995 - MLT1A2 LTR MaLR -53 321 201 545 195 8 23 chr5 101610426 101610554 -98019596 - LTR52 LTR ERVL -77 344 219 2252 193 28 47 chr5 101610566 101610980 -98019170 - L1MA8 LINE L1 -118 6173 5773 1754 161 3 6 chr5 101610980 101611310 -98018840 - L1PA6 LINE L1 0 6154 5826 2252 193 28 47 chr5 101611310 101611512 -98018638 - L1MA8 LINE L1 -518 5773 5569 1380 99 14 26 chr5 101611662 101611927 -98018223 + pTR5 LTR ERV1 170 581 -133 568 255 14 0 chr5 101611927 101612072 -98018078 - MER52A LTR ERV1 -1234 521 375 * 606 215 40 108 chr5 101612062 101612313 -98017837 - MER52A LTR ERV1 -1520 235 2 313 315 16 31 chr5 101612613 101612740 -98017410 + MIR3 SINE MIR 44 168 -40 1011 213 12 4 chr5 101612808 101613061 -98017089 + L1MA5A LINE L1 6023 6277 -20 2297 236 19 43 chr5 101613233 101614489 -98015661 - MER66-int LTR ERV1 -2542 4134 2809 378 57 0 0 chr5 101614689 101614742 -98015408 + (TC)n Simple_repeat Simple_repeat 1 53 0 782 329 53 8 chr5 101614742 101615234 -98014916 - L1MC/D LINE L1 -2012 5796 5283 303 300 60 76 chr5 101615246 101615616 -98014534 - L1MC/D LINE L1 -877 5269 4906 458 251 33 87 chr5 101616165 101616348 -98013802 + L2 LINE L2 3098 3270 -2 1957 219 107 35 chr5 101617653 101618397 -98011753 + MER52A LTR ERV1 1 900 -855 205 278 37 0 chr5 101619567 101619621 -98010529 - MIR SINE MIR -11 251 196 259 247 21 43 chr5 101619877 101619970 -98010180 + L3 LINE CR1 1171 1261 -316 222 118 0 0 chr5 101620021 101620055 -98010095 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 224 281 0 0 chr5 101620156 101620220 -98009930 + L3 LINE CR1 1269 1332 -245 3659 292 30 16 chr5 101621034 101622899 -98007251 + L1 LINE L1 2252 4143 -2003 330 253 149 29 chr5 101623013 101623187 -98006963 - LTR52 LTR ERVL -226 195 1 24 0 0 0 chr5 101623463 101623487 -98006663 + AT_rich Low_complexity Low_complexity 1 24 0 955 229 77 28 chr5 101624193 101624520 -98005630 - L1ME2 LINE L1 -169 5995 5653 557 213 96 21 chr5 101624761 101624949 -98005201 - L1M3 LINE L1 -568 5615 5414 278 323 168 19 chr5 101624969 101625130 -98005020 - MIR SINE MIR -60 202 18 207 300 71 0 chr5 101625332 101625402 -98004748 - L2 LINE L2 -1 3312 3238 872 182 23 18 chr5 101626694 101626914 -98003236 + L1MA10 LINE L1 6112 6332 -2 893 252 31 42 chr5 101627093 101627379 -98002771 + MLT1E2 LTR MaLR 325 607 -19 24 0 0 0 chr5 101628232 101628256 -98001894 + AT_rich Low_complexity Low_complexity 1 24 0 41 48 0 0 chr5 101628402 101628464 -98001686 + AT_rich Low_complexity Low_complexity 1 62 0 2254 144 8 8 chr5 101629211 101629586 -98000564 + THE1C LTR MaLR 1 375 0 222 91 0 0 chr5 101630184 101630217 -97999933 + (CA)n Simple_repeat Simple_repeat 2 34 0 293 244 122 0 chr5 101631234 101631316 -97998834 + L2 LINE L2 3180 3271 -1 503 293 12 18 chr5 101631750 101631917 -97998233 - LTR33 LTR ERVL -306 215 50 252 360 43 7 chr5 101632042 101632181 -97997969 - L2 LINE L2 -2 3311 3168 22 56 0 0 chr5 101632656 101632692 -97997458 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 101634079 101634103 -97996047 + AT_rich Low_complexity Low_complexity 1 24 0 551 331 21 0 chr5 101634916 101635158 -97994992 - L1ME LINE L1 -379 5791 5545 195 247 10 124 chr5 101635169 101635266 -97994884 + MER5B DNA MER1_type 19 104 -74 2480 135 202 89 chr5 101635273 101636419 -97993731 - pTR5 LTR ERV1 0 2438 1028 2116 109 0 0 chr5 101636641 101636924 -97993226 - AluSg SINE Alu -25 285 3 21 0 0 0 chr5 101638020 101638041 -97992109 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr5 101638191 101638222 -97991928 + AT_rich Low_complexity Low_complexity 1 31 0 4375 173 50 0 chr5 101638546 101639479 -97990671 - L1 LINE L1 -960 5186 4207 3995 197 12 26 chr5 101639478 101640451 -97989699 + L1MA4 LINE L1 5333 6292 -8 * 345 24 0 0 chr5 101640520 101640562 -97989588 + (TG)n Simple_repeat Simple_repeat 1 42 0 196 281 37 104 chr5 101641553 101641688 -97988462 + MIR SINE MIR 21 146 -116 1983 164 13 26 chr5 101641688 101642067 -97988083 + MLT1B LTR MaLR 1 374 -16 198 0 0 0 chr5 101643251 101643273 -97986877 + (T)n Simple_repeat Simple_repeat 1 22 0 180 0 0 0 chr5 101643768 101643788 -97986362 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 194 268 0 0 chr5 101645317 101645358 -97984792 - L2 LINE L2 -17 3296 3256 2858 118 0 26 chr5 101645395 101645862 -97984288 + L1MA4A LINE L1 5844 6298 -5 350 316 104 9 chr5 101646306 101646569 -97983581 + L2 LINE L2 2635 2919 -353 270 217 17 0 chr5 101646714 101646774 -97983376 + MLT1L LTR MaLR 131 191 -424 567 311 79 32 chr5 101647172 101647513 -97982637 + L2 LINE L2 2952 3308 -5 479 143 0 22 chr5 101647772 101647863 -97982287 + AluY SINE Alu 18 106 -205 239 257 43 29 chr5 101649380 101649450 -97980700 - MIR SINE MIR -20 242 172 346 263 0 0 chr5 101650221 101650297 -97979853 - MIR SINE MIR -67 141 66 188 345 46 0 chr5 101650313 101650400 -97979750 + L2 LINE L2 3223 3313 0 1810 165 0 34 chr5 101650962 101651319 -97978831 + L1MA4A LINE L1 5954 6298 -5 321 322 46 58 chr5 101651760 101652027 -97978123 + L2 LINE L2 2659 2919 -353 246 263 116 0 chr5 101652137 101652232 -97977918 + MLT1L LTR MaLR 86 191 -424 620 321 79 29 chr5 101652630 101652970 -97977180 + L2 LINE L2 2952 3308 -5 188 362 14 0 chr5 101652971 101653040 -97977110 - MIR SINE MIR -187 75 6 2312 67 0 0 chr5 101653229 101653511 -97976639 + AluY SINE Alu 18 299 -12 1085 131 63 10 chr5 101654008 101654214 -97975936 - Tigger1 DNA MER2_type 0 2418 2202 830 171 6 13 chr5 101654203 101654361 -97975789 - Tigger1 DNA MER2_type -2261 157 1 * 526 292 129 0 chr5 101654466 101654637 -97975513 + MIR SINE MIR 14 206 -56 529 234 156 22 chr5 101654639 101654908 -97975242 - MER5C DNA MER1_type -1 323 19 999 102 0 22 chr5 101655235 101655372 -97974778 - AluSq/x SINE Alu -178 134 1 285 238 99 59 chr5 101655577 101655678 -97974472 + MIR SINE MIR 66 170 -92 2421 62 3 3 chr5 101656030 101656334 -97973816 + AluY SINE Alu 1 304 -7 2504 85 0 0 chr5 101656915 101657220 -97972930 - AluSq SINE Alu 0 313 9 283 360 149 21 chr5 101657451 101657740 -97972410 - L2 LINE L2 -739 2575 2250 25 31 0 0 chr5 101657849 101657881 -97972269 + AT_rich Low_complexity Low_complexity 1 32 0 1981 147 36 29 chr5 101657881 101658297 -97971853 - L1MA3 LINE L1 0 6305 5887 24 0 0 0 chr5 101658305 101658329 -97971821 + AT_rich Low_complexity Low_complexity 1 24 0 211 24 122 0 chr5 101658339 101658380 -97971770 + T-rich Low_complexity Low_complexity 2 47 0 9847 25 1 0 chr5 101658384 101660323 -97969827 - L1PA3 LINE L1 0 6155 4216 5486 56 1 3 chr5 101662274 101662967 -97967183 - L1PA6 LINE L1 0 6154 5463 1063 51 0 0 chr5 101662970 101663108 -97967042 + L1PA6 LINE L1 5326 5463 -691 305 274 36 101 chr5 101663700 101663783 -97966367 - L1ME4a LINE L1 -73 6048 5961 2211 122 3 0 chr5 101663783 101664078 -97966072 - AluSg SINE Alu -14 296 1 305 274 36 101 chr5 101664078 101664213 -97965937 - L1ME4a LINE L1 -160 5961 5844 1582 150 8 0 chr5 101664507 101664754 -97965396 + AluJb SINE Alu 64 312 0 554 54 54 0 chr5 101664837 101664911 -97965239 + MADE1 DNA Mariner 1 78 -2 227 346 39 0 chr5 101665001 101665079 -97965071 + MIR3 SINE MIR 123 203 -5 505 188 10 0 chr5 101665218 101665314 -97964836 + MER81 DNA DNA 1 97 -17 25 51 0 0 chr5 101665509 101665548 -97964602 + AT_rich Low_complexity Low_complexity 1 39 0 1300 197 60 65 chr5 101665756 101666126 -97964024 - MLT1A2 LTR MaLR -4 370 3 180 0 0 0 chr5 101666935 101666955 -97963195 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 316 322 13 92 chr5 101668345 101668572 -97961578 + HAL1 LINE L1 2252 2460 -47 249 356 0 19 chr5 101669838 101669942 -97960208 + MIR SINE MIR 46 147 -61 874 242 49 58 chr5 101670492 101670706 -97959444 - MLT1E LTR MaLR -270 323 112 2114 117 19 32 chr5 101670706 101671022 -97959128 + AluSx SINE Alu 1 312 0 874 242 49 58 chr5 101671022 101671133 -97959017 - MLT1E LTR MaLR -481 112 1 820 160 0 0 chr5 101671493 101671624 -97958526 + FAM SINE Alu 40 170 -15 649 246 176 17 chr5 101673985 101674342 -97955808 - LTR16A1 LTR ERVL 0 457 44 519 308 44 38 chr5 101674348 101674591 -97955559 - MIR SINE MIR 0 262 16 401 355 85 34 chr5 101674832 101675105 -97955045 + L2 LINE L2 2806 3114 -199 227 0 91 0 chr5 101675105 101675138 -97955012 + T-rich Low_complexity Low_complexity 1 36 0 401 355 85 34 chr5 101675138 101675334 -97954816 + L2 LINE L2 3114 3299 -14 22 0 0 0 chr5 101676204 101676226 -97953924 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 101676377 101676399 -97953751 + AT_rich Low_complexity Low_complexity 1 22 0 1912 203 0 11 chr5 101676965 101677334 -97952816 + MLT1A1 LTR MaLR 1 365 0 298 258 0 0 chr5 101677702 101677768 -97952382 - L2 LINE L2 -1 3312 3247 289 314 0 20 chr5 101680197 101680299 -97949851 + L3 LINE CR1 1162 1261 -316 339 167 0 0 chr5 101680318 101680384 -97949766 + (TGAA)n Simple_repeat Simple_repeat 1 66 0 230 268 14 0 chr5 101680477 101680548 -97949602 + L3 LINE CR1 1261 1332 -245 245 210 14 14 chr5 101681715 101681838 -97948312 + GA-rich Low_complexity Low_complexity 1 123 0 749 320 6 35 chr5 101682564 101682665 -97947485 + L1MEc LINE L1 37 139 -6257 2292 123 0 0 chr5 101682665 101682974 -97947176 + AluSx SINE Alu 1 309 -3 749 320 6 35 chr5 101682974 101683213 -97946937 + L1MEc LINE L1 139 367 -6029 257 151 19 0 chr5 101683228 101683281 -97946869 + GA-rich Low_complexity Low_complexity 1 54 0 307 289 35 71 chr5 101683292 101683489 -97946661 + L1MEc LINE L1 416 605 -5791 43 76 0 0 chr5 101683668 101683760 -97946390 + AT_rich Low_complexity Low_complexity 1 92 0 315 0 0 0 chr5 101683984 101684019 -97946131 + (CA)n Simple_repeat Simple_repeat 2 36 0 23 33 0 0 chr5 101684804 101684834 -97945316 + AT_rich Low_complexity Low_complexity 1 30 0 1887 140 38 32 chr5 101686170 101686512 -97943638 + THE1B LTR MaLR 21 364 0 480 209 0 0 chr5 101686514 101686600 -97943550 - MER20 DNA MER1_type -132 87 2 29 28 0 0 chr5 101686962 101686998 -97943152 + AT_rich Low_complexity Low_complexity 1 36 0 1033 271 98 31 chr5 101687234 101687918 -97942232 + L1MEc LINE L1 1371 2100 -4296 1840 130 28 0 chr5 101687918 101688241 -97941909 - MER52-int LTR ERV1 -2563 4974 4643 1709 142 17 31 chr5 101688233 101688585 -97941565 - MER52-int LTR ERV1 -3255 4282 3936 * 2752 144 51 31 chr5 101688594 101689345 -97940805 - MER52-int LTR ERV1 -3580 2381 1416 718 129 32 45 chr5 101689347 101689502 -97940648 - MER52-int LTR ERV1 -4804 1142 990 4931 153 19 22 chr5 101689564 101690498 -97939652 - MER52-int LTR ERV1 -5413 1792 717 9536 143 4 3 chr5 101690498 101692000 -97938150 - MER52-int LTR ERV1 -3890 3201 1698 1741 252 24 42 chr5 101692116 101692190 -97937960 - MER52-int LTR ERV1 -6520 571 497 1949 132 0 0 chr5 101692190 101692486 -97937664 - AluY SINE Alu -15 296 1 1741 252 24 42 chr5 101692486 101692818 -97937332 - MER52-int LTR ERV1 -6594 497 175 1070 263 7 10 chr5 101692818 101693111 -97937039 - AluY SINE Alu -8 293 2 1741 252 24 42 chr5 101693111 101693279 -97936871 - MER52-int LTR ERV1 -6916 175 6 705 82 0 0 chr5 101693477 101693574 -97936576 - AluY SINE Alu -214 97 1 894 199 6 0 chr5 101693574 101693745 -97936405 - MER52-int LTR ERV1 -6916 175 4 6439 198 116 25 chr5 101693747 101695315 -97934835 - MER52A LTR ERV1 0 1755 46 228 244 122 12 chr5 101696284 101696366 -97933784 + L1MEc LINE L1 2719 2809 -3406 3399 191 18 1 chr5 101696467 101697149 -97933001 - MER52A-int LTR ERV1 -4701 2390 1698 3416 134 19 21 chr5 101697265 101697339 -97932811 - MER52A-int LTR ERV1 -6520 571 498 2502 64 0 0 chr5 101697339 101697635 -97932515 - AluY SINE Alu -15 296 1 3416 134 19 21 chr5 101697635 101697957 -97932193 - MER52A-int LTR ERV1 -6593 498 174 2352 99 0 0 chr5 101697957 101698260 -97931890 - AluY SINE Alu -8 303 1 3416 134 19 21 chr5 101698260 101698431 -97931719 - MER52A-int LTR ERV1 -6917 174 4 6480 208 27 27 chr5 101698433 101700002 -97930148 - MER52A LTR ERV1 0 1755 46 1670 221 76 48 chr5 101700723 101701424 -97928726 + L1M4 LINE L1 2450 3169 -2977 361 260 136 59 chr5 101701632 101701801 -97928349 - MIR SINE MIR -61 201 20 29 90 0 0 chr5 101702460 101702538 -97927612 + AT_rich Low_complexity Low_complexity 1 78 0 442 282 27 77 chr5 101703382 101703602 -97926548 - L1ME3A LINE L1 0 6170 5962 605 189 97 120 chr5 101703696 101703766 -97926384 - L1MC5 LINE L1 -433 7528 7458 2112 100 57 13 chr5 101703766 101704065 -97926085 - AluSx SINE Alu 0 312 1 605 189 97 120 chr5 101704065 101704262 -97925888 - L1MC5 LINE L1 -503 7458 7270 360 0 0 0 chr5 101704262 101704302 -97925848 + (TTCA)n Simple_repeat Simple_repeat 2 41 0 605 189 97 120 chr5 101704302 101704415 -97925735 - L1MC5 LINE L1 -691 7270 7156 1507 213 103 106 chr5 101705010 101705078 -97925072 - L1MC5 LINE L1 -433 7528 7461 1870 126 57 20 chr5 101705078 101705379 -97924771 - AluSx SINE Alu 0 312 1 1507 213 103 106 chr5 101705379 101705576 -97924574 - L1MC5 LINE L1 -500 7461 7265 360 0 0 0 chr5 101705576 101705616 -97924534 + (TTCA)n Simple_repeat Simple_repeat 2 41 0 1507 213 103 106 chr5 101705616 101705780 -97924370 - L1MC5 LINE L1 -696 7265 7102 2247 98 3 7 chr5 101705780 101706087 -97924063 + AluSg SINE Alu 1 306 -4 1507 213 103 106 chr5 101706087 101706691 -97923459 - L1MC5 LINE L1 -859 7102 6488 1024 326 56 34 chr5 101706983 101707569 -97922581 - HAL1b LINE L1 -703 645 47 366 288 28 23 chr5 101709164 101709294 -97920856 - MIR SINE MIR -61 147 30 436 295 67 117 chr5 101710207 101710593 -97919557 + L2 LINE L2 2904 3270 -2 297 0 0 0 chr5 101710633 101710666 -97919484 + (CA)n Simple_repeat Simple_repeat 2 34 0 22 56 0 0 chr5 101711014 101711050 -97919100 + AT_rich Low_complexity Low_complexity 1 36 0 249 363 40 8 chr5 101711537 101711661 -97918489 + L2 LINE L2 3184 3311 -2 841 261 133 43 chr5 101711772 101712217 -97917933 + LTR33 LTR ERVL 35 519 -2 769 287 0 64 chr5 101712730 101712981 -97917169 - MIR SINE MIR -25 237 3 191 345 63 14 chr5 101713618 101713760 -97916390 - L2 LINE L2 -1293 2021 1873 242 172 35 23 chr5 101713791 101713878 -97916272 + (TAA)n Simple_repeat Simple_repeat 3 90 0 24 0 0 0 chr5 101714009 101714033 -97916117 + AT_rich Low_complexity Low_complexity 1 24 0 733 168 0 0 chr5 101714456 101714587 -97915563 - L1PB2 LINE L1 -9 6142 6012 5669 119 11 8 chr5 101714793 101715814 -97914336 - L1MA1 LINE L1 -178 6124 5101 6967 194 120 20 chr5 101716478 101718074 -97912076 - MER52A LTR ERV1 0 1755 1 1665 203 47 44 chr5 101718862 101719247 -97910903 + MSTD LTR MaLR 11 396 0 311 315 57 68 chr5 101720852 101721220 -97908930 + L1MA4 LINE L1 4942 5305 -841 352 365 82 12 chr5 101721941 101722111 -97908039 + MIR3 SINE MIR 20 201 -7 21 0 0 0 chr5 101722274 101722295 -97907855 + AT_rich Low_complexity Low_complexity 1 21 0 271 343 84 56 chr5 101722615 101722936 -97907214 - L2 LINE L2 -446 2868 2539 1157 137 32 14 chr5 101726121 101726340 -97903810 + L1MA10 LINE L1 6112 6334 0 181 304 101 74 chr5 101726371 101726519 -97903631 - L2 LINE L2 -38 3275 3124 1338 223 24 24 chr5 101726519 101726811 -97903339 + MLT1E2 LTR MaLR 325 616 -10 1213 267 110 46 chr5 101727911 101728391 -97901759 + MLT1J LTR MaLR 1 511 0 312 293 9 26 chr5 101728681 101728797 -97901353 + CT-rich Low_complexity Low_complexity 4 117 0 395 268 24 16 chr5 101730673 101730796 -97899354 + L2 LINE L2 3147 3270 -2 2280 88 0 0 chr5 101731584 101731867 -97898283 - AluSg SINE Alu -25 285 3 22 35 0 0 chr5 101732431 101732460 -97897690 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 101732962 101732983 -97897167 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr5 101733133 101733164 -97896986 + AT_rich Low_complexity Low_complexity 1 31 0 413 328 39 33 chr5 101733570 101733750 -97896400 - MER5A DNA MER1_type -2 187 7 3812 210 16 28 chr5 101734064 101735020 -97895130 + L1MA4 LINE L1 5349 6292 -8 345 24 0 0 chr5 101735089 101735131 -97895019 + (TG)n Simple_repeat Simple_repeat 1 42 0 235 332 104 64 chr5 101735529 101735857 -97894293 - LTR16C LTR ERVL 0 491 151 249 292 106 9 chr5 101736271 101736384 -97893766 + L1MEd LINE L1 10 133 -5986 * 395 277 66 35 chr5 101736365 101736727 -97893423 + L1ME LINE L1 5118 5496 -674 809 307 111 17 chr5 101736732 101737208 -97892942 + MER34 LTR ERV1 1 521 -21 312 214 83 24 chr5 101737220 101737304 -97892846 + L1ME LINE L1 5508 5596 -574 464 239 132 83 chr5 101737304 101737617 -97892533 + MER34 LTR ERV1 1 364 -221 345 239 22 11 chr5 101737754 101737846 -97892304 + MER34 LTR ERV1 450 542 0 244 220 3 0 chr5 101737849 101737903 -97892247 + L1ME LINE L1 5596 5650 -480 292 111 375 14 chr5 101737903 101737975 -97892175 + MER4A LTR ERV1 1 98 -566 1422 144 3 48 chr5 101737975 101738280 -97891870 + MER4A LTR ERV1 261 610 -54 265 286 39 13 chr5 101739576 101739653 -97890497 + MIR SINE MIR 5 83 -179 1148 182 102 88 chr5 101739924 101740276 -97889874 - MSTD LTR MaLR 0 396 40 399 68 0 0 chr5 101740279 101740338 -97889812 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 42677 34 21 1 chr5 101740340 101746358 -97883792 - L1PA2 LINE L1 -13 6142 2 248 172 17 0 chr5 101746473 101746531 -97883619 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 364 299 162 44 chr5 101747828 101748032 -97882118 + MIR SINE MIR 16 243 -19 205 313 100 0 chr5 101748095 101748175 -97881975 + MER5A DNA MER1_type 97 184 -5 2385 102 0 0 chr5 101748512 101748817 -97881333 - AluSq SINE Alu 0 313 9 215 358 23 52 chr5 101749177 101749350 -97880800 - MIR3 SINE MIR -39 169 2 306 0 0 0 chr5 101749492 101749526 -97880624 + (CA)n Simple_repeat Simple_repeat 2 35 0 2143 101 0 3 chr5 101749853 101750141 -97880009 + AluY SINE Alu 3 289 -22 180 163 0 0 chr5 101750950 101750993 -97879157 + (CAT)n Simple_repeat Simple_repeat 1 43 0 230 229 133 0 chr5 101752373 101752456 -97877694 - L1ME LINE L1 -206 5915 5822 325 312 77 64 chr5 101752553 101752864 -97877286 - L1ME4a LINE L1 -158 5963 5649 15428 19 5 0 chr5 101752871 101755021 -97875129 - L1P1 LINE L1 -427 5728 3567 4688 9 4 0 chr5 101755013 101755544 -97874606 + L1HS LINE L1 5623 6155 0 * 238 225 25 25 chr5 101755678 101755798 -97874352 + T-rich Low_complexity Low_complexity 3 122 0 1138 301 113 29 chr5 101756404 101757232 -97872918 + L2 LINE L2 2414 3311 -2 1966 114 54 0 chr5 101757320 101757600 -97872550 + AluSq SINE Alu 1 295 -18 1425 233 121 13 chr5 101757809 101758265 -97871885 - MLT1D LTR MaLR 0 505 1 2334 201 42 12 chr5 101759212 101759730 -97870420 - L1MB2 LINE L1 -45 6126 5593 1420 189 16 70 chr5 101759725 101760095 -97870055 - L1MA4 LINE L1 -4 6296 5947 * 706 205 95 15 chr5 101760108 101760308 -97869842 - L1MB2 LINE L1 -568 5615 5400 316 304 174 25 chr5 101760315 101760476 -97869674 - MIR SINE MIR -60 202 18 226 286 71 0 chr5 101760678 101760748 -97869402 - L2 LINE L2 -1 3312 3238 419 312 61 26 chr5 101761387 101761662 -97868488 - MER90 LTR ERV1 -12 563 302 210 366 81 24 chr5 101761863 101762158 -97867992 + L2 LINE L2 2554 2865 -449 42 36 0 0 chr5 101762224 101762280 -97867870 + AT_rich Low_complexity Low_complexity 1 56 0 1537 174 0 42 chr5 101762382 101762696 -97867454 - AluJb SINE Alu 0 314 13 279 325 25 74 chr5 101762895 101763058 -97867092 + L2 LINE L2 3141 3295 -18 199 167 0 0 chr5 101764694 101764724 -97865426 + MER5B DNA MER1_type 4 33 -145 2811 107 8 6 chr5 101764798 101765161 -97864989 - THE1B LTR MaLR 0 364 1 1830 255 50 32 chr5 101765190 101765746 -97864404 - L1ME3A LINE L1 -60 6110 5545 237 235 10 122 chr5 101765757 101765855 -97864295 + MER5B DNA MER1_type 19 105 -73 4504 114 105 127 chr5 101765861 101767300 -97862850 - pTR5 LTR ERV1 0 2438 743 367 346 62 0 chr5 101767378 101767508 -97862642 - MIR3 SINE MIR -66 142 5 1040 217 6 0 chr5 101767645 101767820 -97862330 - MER45A DNA AcHobo 0 178 3 604 221 179 36 chr5 101819428 101819623 -97810527 + MER58A DNA MER1_type 2 224 0 24 53 0 0 chr5 101820308 101820346 -97809804 + AT_rich Low_complexity Low_complexity 1 38 0 798 229 0 6 chr5 101820522 101820679 -97809471 - FAM SINE Alu -19 156 1 490 286 118 20 chr5 101820774 101820976 -97809174 - MIR SINE MIR 0 262 39 481 284 51 55 chr5 101821152 101821406 -97808744 - MIR SINE MIR -2 260 8 327 65 0 0 chr5 101821947 101821993 -97808157 + (TC)n Simple_repeat Simple_repeat 1 46 0 279 0 0 0 chr5 101821993 101822024 -97808126 + (TG)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr5 101823146 101823167 -97806983 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr5 101823986 101824022 -97806128 + AT_rich Low_complexity Low_complexity 1 36 0 388 91 0 0 chr5 101824071 101824137 -97806013 - L1MA7 LINE L1 0 6877 6812 13764 189 29 24 chr5 101824141 101828053 -97802097 - L1MA7 LINE L1 -129 6748 2820 13702 150 19 28 chr5 101828067 101830500 -97799650 - Tigger1 DNA MER2_type -1 2417 7 288 0 0 0 chr5 101830523 101830555 -97799595 + (TG)n Simple_repeat Simple_repeat 1 32 0 2053 104 4 0 chr5 101830555 101830834 -97799316 - AluSp SINE Alu -33 280 1 526 224 76 5 chr5 101830834 101831026 -97799124 - L1MA7 LINE L1 -3930 2802 2586 31 68 0 0 chr5 101831026 101831085 -97799065 + AT_rich Low_complexity Low_complexity 1 59 0 3087 83 9 0 chr5 101831085 101831517 -97798633 - L1PA8 LINE L1 -3 6169 5734 9767 104 25 2 chr5 101831517 101833346 -97796804 + L1PA8 LINE L1 3853 5722 -450 9661 256 52 24 chr5 101833368 101835706 -97794444 - L1MA7 LINE L1 -4158 2574 789 1981 131 29 0 chr5 101835706 101836009 -97794141 + AluSg SINE Alu 1 311 0 9661 256 52 24 chr5 101836009 101836820 -97793330 - L1MA7 LINE L1 -5943 789 2 748 161 75 87 chr5 101837572 101837826 -97792324 + Charlie5 DNA MER1_type 2333 2583 -29 1764 186 52 6 chr5 101838337 101838686 -97791464 + MLT1A1 LTR MaLR 1 365 0 887 159 59 12 chr5 101838984 101839154 -97790996 - L1M2 LINE L1 -513 5778 5601 256 149 117 11 chr5 101839148 101839242 -97790908 - L1M2 LINE L1 -2838 3308 3205 * 7374 191 11 17 chr5 101839237 101841363 -97788787 + L1PA16 LINE L1 3684 5794 -372 519 17 0 0 chr5 101841363 101841423 -97788727 + (TG)n Simple_repeat Simple_repeat 1 60 0 7374 191 11 17 chr5 101841423 101841790 -97788360 + L1PA16 LINE L1 5794 6162 -4 858 232 12 0 chr5 101841792 101841956 -97788194 - MLT1D LTR MaLR -335 170 5 243 322 43 84 chr5 101843009 101843332 -97786818 - MLT1K LTR MaLR -137 451 142 21 36 0 0 chr5 101843493 101843521 -97786629 + AT_rich Low_complexity Low_complexity 1 28 0 231 339 153 0 chr5 101844982 101845100 -97785050 - MIR3 SINE MIR -11 197 62 391 346 74 59 chr5 101845214 101845619 -97784531 - L2 LINE L2 -534 2780 2370 273 119 0 0 chr5 101845741 101845783 -97784367 + (TA)n Simple_repeat Simple_repeat 2 43 0 288 262 103 28 chr5 101846082 101846227 -97783923 + MLT1J LTR MaLR 355 510 -1 234 345 71 9 chr5 101846250 101846363 -97783787 + L2 LINE L2 3163 3282 -31 199 376 0 43 chr5 101846690 101846807 -97783343 - MIR SINE MIR -57 151 40 24 53 0 0 chr5 101847747 101847785 -97782365 + AT_rich Low_complexity Low_complexity 1 38 0 194 229 0 0 chr5 101848144 101848179 -97781971 - MIR SINE MIR -11 251 217 266 307 158 0 chr5 101848203 101848317 -97781833 - MIR SINE MIR -13 249 118 1764 239 49 38 chr5 101848401 101849008 -97781142 + L1MC4 LINE L1 6783 7396 -646 981 351 30 5 chr5 101849028 101849430 -97780720 + LTR16A LTR ERVL 21 432 -18 579 255 54 16 chr5 101849431 101849615 -97780535 + L1MC4 LINE L1 7373 7563 -479 342 0 0 0 chr5 101850338 101850376 -97779774 + (TG)n Simple_repeat Simple_repeat 1 38 0 * 546 29 0 0 chr5 101850375 101850443 -97779707 + (GA)n Simple_repeat Simple_repeat 1 68 0 2137 104 7 0 chr5 101851034 101851322 -97778828 + AluSg SINE Alu 3 292 -18 27 73 0 0 chr5 101851874 101851929 -97778221 + AT_rich Low_complexity Low_complexity 1 55 0 180 77 0 0 chr5 101852085 101852111 -97778039 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 3414 37 2 0 chr5 101852112 101852522 -97777628 - L1PA4 LINE L1 -8 6147 5737 3921 22 22 2 chr5 101852522 101853174 -97776976 + L1PA4 LINE L1 5076 5738 -417 338 335 199 6 chr5 101853475 101853636 -97776514 - MER91A DNA MER1_type 0 196 5 14574 215 19 31 chr5 101853693 101859294 -97770856 - L1PA15 LINE L1 0 6816 1323 23 0 0 0 chr5 101861442 101861465 -97768685 + AT_rich Low_complexity Low_complexity 1 23 0 2256 75 3 7 chr5 101861714 101862033 -97768117 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 101862425 101862446 -97767704 + AT_rich Low_complexity Low_complexity 1 21 0 374 302 63 0 chr5 101862701 101862827 -97767323 - MIR SINE MIR -56 206 73 270 0 0 0 chr5 101865338 101865368 -97764782 + (CA)n Simple_repeat Simple_repeat 2 31 0 207 0 0 0 chr5 101865368 101865391 -97764759 + (TA)n Simple_repeat Simple_repeat 1 23 0 2166 108 0 7 chr5 101865529 101865824 -97764326 - AluSg SINE Alu -17 293 1 351 279 82 8 chr5 101865933 101866055 -97764095 - L2 LINE L2 -1 3312 3182 195 383 47 9 chr5 101866091 101866198 -97763952 + MIR SINE MIR 39 149 -59 191 301 114 57 chr5 101866757 101866933 -97763217 - L2 LINE L2 -460 2854 2669 6686 18 0 0 chr5 101866947 101867720 -97762430 + L1P LINE L1 4074 4846 -1300 599 226 167 16 chr5 101867823 101868075 -97762075 + Charlie4a DNA MER1_type 95 384 -124 341 290 59 29 chr5 101868252 101868452 -97761698 - L1 LINE L1 -2643 3503 3296 441 196 46 0 chr5 101868499 101868701 -97761449 - L1MA9 LINE L1 -32 6280 5936 233 192 152 20 chr5 101868706 101868857 -97761293 - L1 LINE L1 -2856 3290 3120 7776 19 0 0 chr5 101870903 101872518 -97757632 + L1PA2 LINE L1 4541 6155 0 646 257 22 56 chr5 101872800 101873054 -97757096 - L1ME1 LINE L1 -5 6161 5921 1531 189 47 0 chr5 101873519 101873643 -97756507 + AluJo SINE Alu 1 118 -194 189 0 0 0 chr5 101873643 101873664 -97756486 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1531 189 47 0 chr5 101873664 101873814 -97756336 + AluJo SINE Alu 118 288 -24 1866 136 0 0 chr5 101873991 101874255 -97755895 - AluSx SINE Alu -13 299 36 635 209 151 0 chr5 101874535 101874674 -97755476 - AluJb SINE Alu -19 293 134 422 340 25 6 chr5 101876089 101876248 -97753902 + MIR SINE MIR 20 181 -81 483 286 81 22 chr5 101876256 101876441 -97753709 - MIR SINE MIR -59 203 8 2231 176 49 5 chr5 101876519 101876929 -97753221 - MSTA LTR MaLR 0 428 1 236 289 26 86 chr5 101878886 101879038 -97751112 - L2 LINE L2 -55 3258 3116 257 360 133 32 chr5 101879992 101880270 -97749880 - L2 LINE L2 -162 3110 2805 673 194 24 0 chr5 101880303 101880427 -97749723 - L1PA16 LINE L1 -16 6150 6024 7823 16 0 0 chr5 101880460 101881942 -97748208 - L1PA3 LINE L1 0 6155 4674 4218 153 16 1 chr5 101881943 101882653 -97747497 - L1PA16 LINE L1 -139 6027 5308 2309 213 21 0 chr5 101882653 101883188 -97746962 + L1PA16 LINE L1 4748 5293 -853 652 319 133 56 chr5 101883205 101884338 -97745812 - L2 LINE L2 -512 2802 1582 189 291 146 57 chr5 101886014 101886172 -97743978 + MIR SINE MIR 52 223 -39 218 393 28 9 chr5 101886305 101886412 -97743738 - L2 LINE L2 -16 3256 3148 4397 168 69 0 chr5 101886528 101887372 -97742778 - L1MC1 LINE L1 -7 6326 5425 31 44 0 0 chr5 101887662 101887707 -97742443 + AT_rich Low_complexity Low_complexity 1 45 0 325 249 2 25 chr5 101887880 101888000 -97742150 + L1MC5 LINE L1 7832 8032 -10 388 340 29 46 chr5 101888161 101888356 -97741794 - L2 LINE L2 -1046 2268 2075 2218 105 0 7 chr5 101888356 101888671 -97741479 + AluSc SINE Alu 1 313 0 388 340 29 46 chr5 101888671 101888715 -97741435 - L2 LINE L2 -1239 2075 2032 394 359 26 43 chr5 101889291 101889392 -97740758 - MIR SINE MIR -2 260 159 984 99 0 0 chr5 101889392 101889533 -97740617 - L1MA1 LINE L1 0 6302 6162 394 359 26 43 chr5 101889533 101889665 -97740485 - MIR SINE MIR -103 159 31 885 217 68 3 chr5 101890689 101891057 -97739093 + L1 LINE L1 2230 2782 -3364 357 182 4 4 chr5 101891050 101891121 -97739029 + L1 LINE L1 2491 2561 -3585 * 5374 122 31 19 chr5 101891203 101892557 -97737593 - L1PA12 LINE L1 -8 6160 4823 2205 67 46 0 chr5 101892557 101892841 -97737309 - AluY SINE Alu -14 297 1 5374 122 31 19 chr5 101892841 101892906 -97737244 - L1PA12 LINE L1 -1345 4823 4760 933 251 0 0 chr5 101892914 101893125 -97737025 + L1 LINE L1 2555 2765 -3381 931 240 159 29 chr5 101893129 101893537 -97736613 + L1MA8 LINE L1 5814 6274 -17 1563 271 67 57 chr5 101893681 101893917 -97736233 + L2 LINE L2 2308 2540 -774 1903 179 28 8 chr5 101893917 101894275 -97735875 + MLT1A1 LTR MaLR 1 365 0 1563 271 67 57 chr5 101894275 101894665 -97735485 + L2 LINE L2 2540 2940 -374 1428 183 62 33 chr5 101895542 101895666 -97734484 + AluJo SINE Alu 4 123 -183 459 0 0 0 chr5 101895666 101895717 -97734433 + (CA)n Simple_repeat Simple_repeat 2 52 0 1428 183 62 33 chr5 101895717 101895887 -97734263 + AluJo SINE Alu 123 306 0 25 31 0 0 chr5 101896800 101896832 -97733318 + AT_rich Low_complexity Low_complexity 1 32 0 2166 59 0 0 chr5 101898125 101898429 -97731721 + AluY SINE Alu 29 332 0 1318 143 18 0 chr5 101898581 101898805 -97731345 + L1MB3 LINE L1 5955 6182 -1 32 67 0 0 chr5 101899397 101899457 -97730693 + AT_rich Low_complexity Low_complexity 1 60 0 1788 148 50 4 chr5 101899462 101899623 -97730527 - AluJo SINE Alu -21 291 110 372 22 0 0 chr5 101899623 101899668 -97730482 + (TG)n Simple_repeat Simple_repeat 2 46 0 1788 148 50 4 chr5 101899668 101899784 -97730366 - AluJo SINE Alu -202 110 1 2325 106 3 3 chr5 101900352 101900664 -97729486 - AluSx SINE Alu 0 312 1 270 301 16 24 chr5 101901783 101901906 -97728244 + MLT1L LTR MaLR 493 614 -1 286 311 98 0 chr5 101903183 101903305 -97726845 + MIR SINE MIR 53 186 -76 181 306 0 59 chr5 101903316 101903401 -97726749 - L3 LINE CR1 -856 721 642 3782 30 13 2 chr5 101903977 101904438 -97725712 - L1PA4 LINE L1 -3 6152 5687 280 311 13 53 chr5 101904762 101904913 -97725237 - L1ME LINE L1 -440 5681 5537 276 315 21 39 chr5 101905289 101905477 -97724673 + MIR SINE MIR 17 194 -66 22 0 0 0 chr5 101906592 101906614 -97723536 + AT_rich Low_complexity Low_complexity 1 22 0 764 271 28 9 chr5 101906796 101907010 -97723140 - MER20 DNA MER1_type 0 219 2 330 328 43 9 chr5 101907127 101907243 -97722907 + MER5B DNA MER1_type 2 121 -57 695 241 82 0 chr5 101907528 101907698 -97722452 + MER5A DNA MER1_type 3 186 -3 843 306 114 37 chr5 101908335 101908537 -97721613 - L2 LINE L2 -591 2723 2538 1855 170 3 19 chr5 101908537 101908849 -97721301 - AluJo SINE Alu -5 307 1 843 306 114 37 chr5 101908849 101909209 -97720941 - L2 LINE L2 -776 2538 2118 1251 203 20 106 chr5 101910986 101911452 -97718698 + MLT2B1 LTR ERVL 3 515 0 5948 95 2 12 chr5 101912478 101913725 -97716425 - L1PA13 LINE L1 0 6163 4899 7725 178 6 35 chr5 101913726 101915332 -97714818 + L1P LINE L1 3273 4831 -1315 243 374 58 0 chr5 101915767 101915906 -97714244 + MIR SINE MIR 100 246 -16 236 326 51 31 chr5 101915930 101916028 -97714122 - L2 LINE L2 -1 3312 3213 958 141 0 0 chr5 101917921 101918063 -97712087 - MER57A LTR ERV1 -174 229 88 37841 50 3 0 chr5 101918079 101923651 -97706499 - L1PA4 LINE L1 -3 6152 567 189 350 0 0 chr5 101924245 101924325 -97705825 + MIR SINE MIR 183 262 0 231 340 95 15 chr5 101924437 101924699 -97705451 + L1M2 LINE L1 2 284 -6565 5471 123 14 22 chr5 101925130 101926317 -97703833 + L1PA15 LINE L1 4320 5470 -695 189 0 0 0 chr5 101926317 101926338 -97703812 + (CAA)n Simple_repeat Simple_repeat 2 22 0 5471 123 14 22 chr5 101926338 101927022 -97703128 + L1PA15 LINE L1 5470 6158 -7 244 266 31 62 chr5 101927036 101927164 -97702986 - L1ME LINE L1 -303 5818 5695 838 275 38 0 chr5 101927632 101927843 -97702307 - MER20 DNA MER1_type 0 219 1 214 50 50 0 chr5 101928340 101928380 -97701770 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 649 325 48 30 chr5 101928420 101928688 -97701462 - LTR33 LTR ERVL -169 352 80 1259 242 44 0 chr5 101928728 101929067 -97701083 - L1ME LINE L1 -743 5403 5050 187 258 70 102 chr5 101930082 101930210 -97699940 + L3 LINE CR1 89 212 -1365 615 351 71 59 chr5 101931450 101932164 -97697986 - L2 LINE L2 -1 3271 2538 337 219 76 21 chr5 101933519 101933632 -97696518 + MIR SINE MIR 25 146 -68 526 274 127 11 chr5 101933649 101933875 -97696275 - MIR SINE MIR -11 251 3 186 103 0 0 chr5 101934068 101934097 -97696053 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 649 266 20 82 chr5 101934097 101934186 -97695964 - L2 LINE L2 -7 3306 3213 3355 124 11 18 chr5 101934186 101934750 -97695400 + L1MA3 LINE L1 5746 6305 0 649 266 20 82 chr5 101934750 101934964 -97695186 - L2 LINE L2 -100 3213 3022 233 339 6 29 chr5 101935612 101935783 -97694367 + T-rich Low_complexity Low_complexity 4 170 0 461 339 90 45 chr5 101935783 101936205 -97693945 - L2 LINE L2 -15 3298 2858 2216 156 3 0 chr5 101937125 101937484 -97692666 + MER46B DNA MER2_type 1 235 -1 2096 166 3 0 chr5 101937871 101938215 -97691935 + MER7A DNA MER2_type 4 346 0 6495 205 25 9 chr5 101938248 101939518 -97690632 + L1MA2 LINE L1 11 1301 -6264 * 28093 101 44 4 chr5 101939517 101944502 -97685648 - L1PA6 LINE L1 -225 6244 1042 9537 186 31 31 chr5 101944493 101947883 -97682267 + L1MA2 LINE L1 2345 5832 -1891 * 1288 88 0 0 chr5 101947883 101948054 -97682096 - AluY SINE Alu 0 311 141 9537 186 31 31 chr5 101948054 101949947 -97680203 + L1MA2 LINE L1 5832 7723 0 191 343 40 45 chr5 101949969 101950170 -97679980 - L2 LINE L2 -911 2403 2204 572 226 7 0 chr5 101950377 101950532 -97679618 + CT-rich Low_complexity Low_complexity 2 157 0 2053 136 33 31 chr5 101952535 101952895 -97677255 - THE1B LTR MaLR -1 363 3 22 35 0 0 chr5 101953086 101953115 -97677035 + AT_rich Low_complexity Low_complexity 1 29 0 2447 73 0 0 chr5 101954121 101954423 -97675727 - AluY SINE Alu -9 302 1 25541 53 7 1 chr5 101956821 101962925 -97667225 - L1PA4 LINE L1 -1 6154 1 351 0 0 0 chr5 101963082 101963121 -97667029 + (CA)n Simple_repeat Simple_repeat 1 39 0 25 20 0 59 chr5 101964062 101964113 -97666037 + AT_rich Low_complexity Low_complexity 1 48 0 275 324 14 34 chr5 101964254 101964402 -97665748 - MER5A DNA MER1_type -44 145 1 5159 169 35 38 chr5 101964486 101965569 -97664581 - L1MC3 LINE L1 0 7785 6706 1354 196 50 45 chr5 101965655 101965785 -97664365 - Charlie1 DNA MER1_type -7 2754 2626 2097 107 36 0 chr5 101965785 101966066 -97664084 - AluSx SINE Alu -21 291 1 1354 196 50 45 chr5 101966066 101966379 -97663771 - Charlie1 DNA MER1_type -135 2626 2309 742 262 12 0 chr5 101966376 101966544 -97663606 - Charlie1 DNA MER1_type -2591 170 1 * 505 303 46 29 chr5 101968001 101968176 -97661974 + MER5B DNA MER1_type 1 178 0 2328 96 0 3 chr5 101968247 101968559 -97661591 + AluY SINE Alu 1 311 0 273 29 0 0 chr5 101968844 101968878 -97661272 + (CA)n Simple_repeat Simple_repeat 2 35 0 232 269 148 0 chr5 101969119 101969227 -97660923 + MIR SINE MIR 61 184 -78 203 348 0 14 chr5 101969511 101969580 -97660570 - MIR SINE MIR -160 102 35 361 276 65 0 chr5 101969629 101969752 -97660398 - MIR SINE MIR -56 206 76 245 271 53 0 chr5 101970781 101970870 -97659280 + Charlie8 DNA MER1_type 231 2417 0 2067 287 53 33 chr5 101971193 101972011 -97658139 - L2 LINE L2 -234 3079 2237 238 268 94 14 chr5 101972020 101972158 -97657992 - L1MEd LINE L1 -5041 1890 1742 2387 59 7 0 chr5 101972758 101973048 -97657102 - AluY SINE Alu -11 300 9 540 269 87 19 chr5 101973456 101973664 -97656486 + L1M4b LINE L1 11 232 -6627 417 256 70 39 chr5 101974178 101974307 -97655843 - MLT1H LTR MaLR -195 354 222 235 276 57 9 chr5 101975638 101975743 -97654407 - MLT-int LTR MaLR -1624 111 2 407 268 70 28 chr5 101976552 101976694 -97653456 + MIR SINE MIR 103 250 -12 180 77 0 0 chr5 101979970 101979996 -97650154 + (TC)n Simple_repeat Simple_repeat 1 26 0 331 328 90 15 chr5 101980147 101980281 -97649869 + L1ME3A LINE L1 6004 6147 -23 1583 176 7 14 chr5 101981893 101982182 -97647968 + AluJo SINE Alu 3 289 -23 189 0 0 0 chr5 101982183 101982204 -97647946 + (TTAAA)n Simple_repeat Simple_repeat 5 25 0 32 43 0 0 chr5 101982251 101982297 -97647853 + AT_rich Low_complexity Low_complexity 1 46 0 404 295 133 28 chr5 101983352 101983637 -97646513 - L1MC/D LINE L1 -2088 5720 5406 2067 119 7 0 chr5 101983748 101984050 -97646100 + AluSg SINE Alu 1 304 -6 339 313 38 0 chr5 101984285 101984445 -97645705 - L1MEd LINE L1 -5001 1422 1257 2176 118 3 0 chr5 101984512 101984816 -97645334 - AluSx SINE Alu -7 305 1 31 0 0 0 chr5 101985582 101985613 -97644537 + AT_rich Low_complexity Low_complexity 1 31 0 335 300 99 24 chr5 101985821 101986318 -97643832 - L1MC/D LINE L1 -1111 5035 4502 2451 65 0 3 chr5 101986496 101986803 -97643347 - AluY SINE Alu -5 306 1 534 266 41 33 chr5 101986967 101987238 -97642912 - L1MC/D LINE L1 -2043 4103 3831 244 285 69 0 chr5 101987273 101987417 -97642733 - L1MC/D LINE L1 -2398 3748 3595 506 112 34 22 chr5 101987515 101987693 -97642457 + (TA)n Simple_repeat Simple_repeat 1 180 0 491 112 58 0 chr5 101987706 101987967 -97642183 + (TA)n Simple_repeat Simple_repeat 1 276 0 204 204 37 0 chr5 102039331 102039385 -97590765 + A-rich Low_complexity Low_complexity 4 59 0 249 350 0 0 chr5 102041367 102041504 -97588646 + A-rich Low_complexity Low_complexity 1 137 0 27 0 0 0 chr5 102042048 102042075 -97588075 + AT_rich Low_complexity Low_complexity 1 27 0 273 278 9 17 chr5 102043753 102043868 -97586282 + GA-rich Low_complexity Low_complexity 2 115 0 227 320 0 0 chr5 102048378 102048453 -97581697 + (CATA)n Simple_repeat Simple_repeat 4 78 0 21 0 0 0 chr5 102050737 102050758 -97579392 + AT_rich Low_complexity Low_complexity 1 21 0 218 331 125 29 chr5 102051532 102051668 -97578482 + L2 LINE L2 3122 3270 -2 185 286 0 0 chr5 102052968 102053017 -97577133 - L2 LINE L2 0 3313 3265 2110 102 75 36 chr5 102053199 102053560 -97576590 + THE1C LTR MaLR 1 375 0 238 244 126 30 chr5 102054315 102054450 -97575700 - L2 LINE L2 -982 2332 2185 581 310 55 5 chr5 102056418 102056643 -97573507 + MIR SINE MIR 28 262 0 257 382 20 0 chr5 102056888 102056990 -97573160 + MIR3 SINE MIR 99 202 -6 287 335 68 25 chr5 102057172 102057333 -97572817 + L2 LINE L2 3104 3271 -1 746 235 80 32 chr5 102057393 102057644 -97572506 - L1ME LINE L1 -473 5691 5429 1244 228 95 15 chr5 102057775 102058175 -97571975 - L1ME LINE L1 -865 5281 4850 24 77 0 0 chr5 102059297 102059349 -97570801 + AT_rich Low_complexity Low_complexity 1 52 0 28 86 0 0 chr5 102059813 102059883 -97570267 + AT_rich Low_complexity Low_complexity 1 70 0 35 24 0 0 chr5 102060455 102060497 -97569653 + AT_rich Low_complexity Low_complexity 1 42 0 2493 247 102 55 chr5 102060870 102061266 -97568884 - L1M4 LINE L1 -591 5587 5211 1977 142 3 19 chr5 102061266 102061582 -97568568 - AluSp SINE Alu -2 311 1 2493 247 102 55 chr5 102061582 102062023 -97568127 - L1M4 LINE L1 -967 5211 4792 1744 179 68 3 chr5 102062023 102062363 -97567787 + MLT1A1 LTR MaLR 1 362 -3 2493 247 102 55 chr5 102062363 102063054 -97567096 - L1M4 LINE L1 -1386 4792 3986 23 33 0 0 chr5 102063225 102063255 -97566895 + AT_rich Low_complexity Low_complexity 1 30 0 696 192 24 0 chr5 102063808 102063933 -97566217 - FLAM_C SINE Alu -5 128 1 23 33 0 0 chr5 102064102 102064132 -97566018 + AT_rich Low_complexity Low_complexity 1 30 0 223 244 26 17 chr5 102065809 102065924 -97564226 + (TA)n Simple_repeat Simple_repeat 1 116 0 650 251 53 79 chr5 102066389 102066692 -97563458 + MLT1I LTR MaLR 115 409 0 266 68 45 0 chr5 102068703 102068747 -97561403 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 291 28 0 0 chr5 102068897 102068933 -97561217 + (TG)n Simple_repeat Simple_repeat 2 37 0 2141 117 0 23 chr5 102068996 102069305 -97560845 - AluSx SINE Alu -10 302 1 209 376 86 26 chr5 102069397 102069514 -97560636 + L2 LINE L2 3182 3305 -8 1505 246 114 9 chr5 102070148 102070603 -97559547 + MLT1D LTR MaLR 1 503 -2 252 289 72 12 chr5 102071009 102071092 -97559058 - L3 LINE CR1 -120 1457 1370 2236 77 0 10 chr5 102071118 102071418 -97558732 + AluY SINE Alu 1 297 -14 192 273 0 0 chr5 102073049 102073093 -97557057 + MIR SINE MIR 94 137 -125 255 297 108 9 chr5 102074000 102074111 -97556039 - MIR SINE MIR -30 232 111 198 0 0 0 chr5 102074513 102074535 -97555615 + (CA)n Simple_repeat Simple_repeat 1 22 0 24 0 0 0 chr5 102074717 102074741 -97555409 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr5 102074995 102075015 -97555135 + (TC)n Simple_repeat Simple_repeat 1 20 0 1656 229 78 34 chr5 102075420 102075892 -97554258 - MLT1D LTR MaLR -1 504 12 311 241 83 0 chr5 102075962 102076096 -97554054 - L1ME LINE L1 -303 5818 5666 976 224 158 25 chr5 102076165 102076558 -97553592 - Charlie2 DNA MER1_type -562 2300 1856 560 291 80 29 chr5 102076593 102076868 -97553282 - Charlie2 DNA MER1_type -2567 295 7 510 234 71 88 chr5 102079038 102079277 -97550873 - MIR SINE MIR 0 262 28 257 211 0 0 chr5 102079664 102079721 -97550429 + MLT1G1 LTR MaLR 6 62 -533 1613 216 70 16 chr5 102080848 102081288 -97548862 + MLT1C LTR MaLR 4 467 0 1054 252 21 0 chr5 102081343 102081581 -97548569 + MIR SINE MIR 8 250 -12 2034 133 0 10 chr5 102082600 102082893 -97547257 - AluSx SINE Alu -22 290 1 191 298 0 18 chr5 102083009 102083066 -97547084 - MIR SINE MIR -13 249 194 3700 133 14 20 chr5 102083123 102083762 -97546388 - MER41B LTR ERV1 0 635 1 21 0 0 0 chr5 102083769 102083790 -97546360 + AT_rich Low_complexity Low_complexity 1 21 0 519 234 28 80 chr5 102084634 102085023 -97545127 - L1MC5 LINE L1 -44 7917 7549 1345 129 40 13 chr5 102085142 102085366 -97544784 + MER30 DNA MER1_type 1 230 0 443 265 48 32 chr5 102085796 102085985 -97544165 - HAL1 LINE L1 -26 2481 2290 216 273 71 50 chr5 102086580 102086679 -97543471 - MIR3 SINE MIR -3 205 105 237 331 123 13 chr5 102087411 102087565 -97542585 + MIR3 SINE MIR 34 204 -4 1138 153 28 0 chr5 102087863 102088040 -97542110 + AluJo SINE Alu 87 268 -44 251 137 0 20 chr5 102088142 102088193 -97541957 + (GAAA)n Simple_repeat Simple_repeat 2 51 0 398 264 72 77 chr5 102089057 102089265 -97540885 - MIR SINE MIR -48 214 8 24 32 0 0 chr5 102089939 102089970 -97540180 + AT_rich Low_complexity Low_complexity 1 31 0 490 310 82 78 chr5 102090029 102090580 -97539570 - L1MC4a LINE L1 -30 6091 5539 335 265 52 147 chr5 102090591 102090724 -97539426 - MIR SINE MIR -3 259 115 2464 68 3 0 chr5 102090724 102091034 -97539116 - AluY SINE Alu 0 311 1 1985 129 3 25 chr5 102091044 102091361 -97538789 - AluSx SINE Alu -2 310 1 335 265 52 147 chr5 102091361 102091488 -97538662 - MIR SINE MIR -156 106 14 225 245 0 0 chr5 102094141 102094194 -97535956 - L1MD3 LINE L1 -1324 6671 6619 289 316 73 0 chr5 102094392 102094528 -97535622 + MIR3 SINE MIR 39 184 -24 523 174 11 0 chr5 102094988 102095080 -97535070 + MLT1A1 LTR MaLR 1 93 -281 873 188 13 0 chr5 102095080 102095234 -97534916 + MLT1A1 LTR MaLR 210 365 0 514 281 174 34 chr5 102095393 102095628 -97534522 - MLT1H1 LTR MaLR -287 268 1 1804 164 12 88 chr5 102095975 102096397 -97533753 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr5 102097842 102097863 -97532287 + AT_rich Low_complexity Low_complexity 1 21 0 321 245 132 28 chr5 102098091 102098197 -97531953 - L2 LINE L2 -2 3270 3154 368 233 68 68 chr5 102098202 102098305 -97531845 - L2 LINE L2 -2 3270 3168 2860 148 82 21 chr5 102099055 102099614 -97530536 + LTR59 LTR ERV1 1 593 -4 1716 93 26 19 chr5 102099938 102100207 -97529943 - L1PB2 LINE L1 -2 6149 5879 685 130 0 0 chr5 102100207 102100307 -97529843 - L1PB2 LINE L1 -499 5652 5553 2863 134 19 0 chr5 102100339 102100713 -97529437 + MER57B LTR ERV1 1 385 -49 7453 38 0 0 chr5 102100713 102102078 -97528072 - L1PA4 LINE L1 0 6155 4791 2863 134 19 0 chr5 102102078 102102129 -97528021 + MER57B LTR ERV1 385 434 0 206 208 19 19 chr5 102102733 102102745 -97527405 + L2 LINE L2 3261 3272 -41 194 81 27 0 chr5 102102745 102102782 -97527368 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 206 208 19 19 chr5 102102782 102102822 -97527328 + L2 LINE L2 3271 3313 0 371 232 26 0 chr5 102103072 102103227 -97526923 + (TA)n Simple_repeat Simple_repeat 2 160 0 28 29 0 0 chr5 102103245 102103280 -97526870 + AT_rich Low_complexity Low_complexity 1 35 0 1853 271 29 27 chr5 102103570 102104117 -97526033 + MER77 LTR ERV1 54 601 -4 273 273 52 0 chr5 102104338 102104415 -97525735 + MIR SINE MIR 4 84 -178 346 365 102 31 chr5 102104753 102105145 -97525005 - L2 LINE L2 0 3313 2894 1939 117 6 41 chr5 102107128 102107445 -97522705 + AluSx SINE Alu 1 306 -6 263 48 0 24 chr5 102108656 102108698 -97521452 + (TA)n Simple_repeat Simple_repeat 1 41 0 317 211 0 51 chr5 102108894 102109069 -97521081 + (TA)n Simple_repeat Simple_repeat 1 166 0 250 180 76 29 chr5 102109076 102109248 -97520902 + (CTATA)n Simple_repeat Simple_repeat 1 180 0 * 320 93 0 122 chr5 102109174 102109379 -97520771 + (TA)n Simple_repeat Simple_repeat 1 180 0 507 168 176 34 chr5 102110790 102110909 -97519241 - MSTA LTR MaLR -45 383 248 8608 158 19 39 chr5 102110934 102112543 -97517607 + MSTA-int LTR MaLR 3 1580 0 2002 156 119 8 chr5 102112543 102112928 -97517222 + MSTA LTR MaLR 1 428 0 5013 224 85 31 chr5 102112928 102114183 -97515967 - L1M4 LINE L1 -524 5660 4473 1785 184 3 3 chr5 102114183 102114493 -97515657 - AluJo SINE Alu -2 310 1 5013 224 85 31 chr5 102114493 102114640 -97515510 - L1M4 LINE L1 -1711 4473 4335 2184 72 55 0 chr5 102114640 102114930 -97515220 - AluY SINE Alu -5 306 1 5013 224 85 31 chr5 102114930 102115528 -97514622 - L1M4 LINE L1 -1849 4335 3559 2450 83 3 6 chr5 102115536 102115849 -97514301 + AluSp SINE Alu 1 312 -1 23 0 0 0 chr5 102116003 102116026 -97514124 + AT_rich Low_complexity Low_complexity 1 23 0 180 182 0 0 chr5 102116299 102116343 -97513807 + (CAGAGA)n Simple_repeat Simple_repeat 3 46 0 23 33 0 0 chr5 102117101 102117131 -97513019 + AT_rich Low_complexity Low_complexity 1 30 0 258 296 0 0 chr5 102117617 102117698 -97512452 - L1ME LINE L1 -529 5592 5512 731 313 32 11 chr5 102118702 102119050 -97511100 - L1ME3A LINE L1 -272 5898 5544 599 289 34 6 chr5 102120166 102120370 -97509780 - L1ME2 LINE L1 0 6162 5954 365 306 58 19 chr5 102120378 102120584 -97509566 - HAL1 LINE L1 -2281 226 13 26 30 0 0 chr5 102120607 102120640 -97509510 + AT_rich Low_complexity Low_complexity 1 33 0 2347 38 45 0 chr5 102120822 102121109 -97509041 - AluY SINE Alu -11 300 1 21 0 0 0 chr5 102121343 102121364 -97508786 + AT_rich Low_complexity Low_complexity 1 21 0 2300 41 4 0 chr5 102122107 102122375 -97507775 + AluY SINE Alu 30 298 -13 234 0 0 0 chr5 102122489 102122515 -97507635 + (TCCCC)n Simple_repeat Simple_repeat 1 26 0 1087 234 0 5 chr5 102122516 102122730 -97507420 - AluJo SINE Alu -16 296 84 7039 48 15 10 chr5 102122883 102123853 -97506297 - L1PA6 LINE L1 -1 6153 5200 23 33 0 0 chr5 102124133 102124163 -97505987 + AT_rich Low_complexity Low_complexity 1 30 0 198 103 0 0 chr5 102124932 102124961 -97505189 + (A)n Simple_repeat Simple_repeat 1 29 0 4827 133 19 19 chr5 102125019 102125851 -97504299 - L1PA13 LINE L1 0 6163 5332 211 212 0 45 chr5 102127023 102127089 -97503061 + T-rich Low_complexity Low_complexity 2 64 0 300 356 0 0 chr5 102127231 102127335 -97502815 - L2 LINE L2 -9 3304 3201 612 262 53 5 chr5 102127426 102127613 -97502537 + MIR SINE MIR 65 260 -2 749 297 23 35 chr5 102127871 102128127 -97502023 + LTR16C LTR ERVL 1 253 -238 2002 142 119 13 chr5 102128131 102128330 -97501820 + MSTA LTR MaLR 1 178 -250 285 29 0 0 chr5 102128330 102128364 -97501786 + (TC)n Simple_repeat Simple_repeat 1 34 0 2002 142 119 13 chr5 102128364 102128551 -97501599 + MSTA LTR MaLR 178 428 0 7482 163 8 38 chr5 102128553 102129913 -97500237 + MSTA-int LTR MaLR 3 1322 -258 1040 172 102 19 chr5 102129915 102130130 -97500020 + MSTA LTR MaLR 194 426 -2 464 330 79 9 chr5 102130132 102130347 -97499803 + LTR16C LTR ERVL 253 482 -9 311 373 71 16 chr5 102130462 102130717 -97499433 - HAL1b LINE L1 -994 354 86 14377 99 5 20 chr5 102131427 102133581 -97496569 + HERVH LTR ERV1 865 2985 -4728 970 126 25 0 chr5 102133567 102133726 -97496424 + HERVH LTR ERV1 3128 3290 -4423 * 6447 131 4 22 chr5 102133716 102135476 -97494674 + HERVH LTR ERV1 3492 6012 -1818 1206 115 46 18 chr5 102135473 102135690 -97494460 + HERVH LTR ERV1 5597 5819 -1894 * 2368 78 62 13 chr5 102135690 102136062 -97494088 + HERVH LTR ERV1 7324 7713 0 2618 70 122 5 chr5 102136062 102136463 -97493687 + LTR7 LTR ERV1 1 448 -2 265 288 112 48 chr5 102136465 102136590 -97493560 - L2 LINE L2 -21 3292 3160 1825 93 0 0 chr5 102136592 102136818 -97493332 + AluSc SINE Alu 3 228 -81 713 360 72 12 chr5 102136992 102137395 -97492755 - LTR16A LTR ERVL -23 427 1 211 136 34 0 chr5 102138269 102138328 -97491822 + (TA)n Simple_repeat Simple_repeat 2 62 0 219 287 103 11 chr5 102138779 102138866 -97491284 + L2 LINE L2 2220 2314 -1000 682 231 0 0 chr5 102139582 102139716 -97490434 + HERVH LTR ERV1 5016 5149 -2564 1341 114 43 0 chr5 102139717 102139928 -97490222 + HERVH LTR ERV1 5600 5819 -1894 693 86 0 0 chr5 102140654 102140747 -97489403 + AluSg/x SINE Alu 209 301 -9 737 144 85 5 chr5 102140752 102141031 -97489119 - THE1C LTR MaLR -35 340 1 969 198 178 16 chr5 102141217 102141492 -97488658 - AluJb SINE Alu 0 314 1 1265 199 31 28 chr5 102141516 102141843 -97488307 - L1MA8 LINE L1 -4 6287 5960 27 29 0 0 chr5 102142437 102142471 -97487679 + AT_rich Low_complexity Low_complexity 1 34 0 222 200 0 0 chr5 102142576 102142616 -97487534 + (CA)n Simple_repeat Simple_repeat 2 41 0 595 289 13 0 chr5 102143248 102143404 -97486746 - Charlie8 DNA MER1_type -2141 276 119 1710 184 3 0 chr5 102143584 102143899 -97486251 + AluJo SINE Alu 1 316 0 338 80 0 0 chr5 102144250 102144300 -97485850 + L1PA6 LINE L1 6101 6150 -4 22 0 0 0 chr5 102144473 102144495 -97485655 + AT_rich Low_complexity Low_complexity 1 22 0 335 108 0 135 chr5 102145026 102145100 -97485050 + MADE1 DNA Mariner 17 80 0 23 0 0 0 chr5 102146043 102146066 -97484084 + AT_rich Low_complexity Low_complexity 1 23 0 1730 170 154 19 chr5 102146288 102146665 -97483485 + MSTA LTR MaLR 1 428 0 240 143 0 0 chr5 102147849 102147891 -97482259 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 971 193 0 6 chr5 102147893 102148069 -97482081 - FRAM SINE Alu 0 176 2 191 348 8 42 chr5 102148445 102148563 -97481587 - L3 LINE CR1 -394 1183 1070 1587 179 40 81 chr5 102148999 102149396 -97480754 - MLT2D LTR ERVL 0 414 34 200 289 36 12 chr5 102149930 102150013 -97480137 - MER5A DNA MER1_type 0 189 105 759 117 0 0 chr5 102150259 102150397 -97479753 - AluSp/q SINE Alu 0 309 172 250 270 0 50 chr5 102150634 102150660 -97479490 + U2 snRNA snRNA 11 37 -151 1847 144 34 3 chr5 102150660 102150987 -97479163 + MER44D DNA MER2_type 2 608 -1 250 270 0 50 chr5 102150987 102151060 -97479090 + U2 snRNA snRNA 37 105 -83 375 317 153 15 chr5 102152891 102153093 -97477057 - MIR SINE MIR -13 249 20 880 142 34 7 chr5 102153549 102153697 -97476453 + FAM SINE Alu 23 174 -11 298 106 45 30 chr5 102154702 102154768 -97475382 + L1MB3 LINE L1 6110 6176 -7 28 29 0 0 chr5 102154768 102154803 -97475347 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr5 102155151 102155183 -97474967 + AT_rich Low_complexity Low_complexity 1 32 0 262 193 12 12 chr5 102156015 102156098 -97474052 + CT-rich Low_complexity Low_complexity 4 86 0 5379 116 7 12 chr5 102156176 102157018 -97473132 + L1PB2 LINE L1 5307 6144 -7 314 151 0 19 chr5 102157165 102157218 -97472932 - 5S rRNA rRNA -69 52 1 28189 52 3 1 chr5 102157756 102163899 -97466251 + L1PA4 LINE L1 1 6151 -4 362 247 45 0 chr5 102164521 102164610 -97465540 + MIR SINE MIR 138 230 -32 26 30 0 0 chr5 102165288 102165321 -97464829 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 102166449 102166470 -97463680 + AT_rich Low_complexity Low_complexity 1 21 0 186 348 0 0 chr5 102166588 102166657 -97463493 + L2 LINE L2 2574 2642 -672 1741 225 22 45 chr5 102166958 102167446 -97462704 + MLT1D LTR MaLR 21 497 -8 270 297 116 22 chr5 102168445 102168583 -97461567 + MER5B DNA MER1_type 28 178 0 261 0 0 0 chr5 102169564 102169593 -97460557 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 2388 81 0 0 chr5 102169668 102169963 -97460187 + AluSg SINE Alu 1 295 -15 826 258 18 18 chr5 102170066 102170287 -97459863 + L1MD1 LINE L1 166 386 -6154 325 336 61 57 chr5 102170323 102170552 -97459598 + L1MD1 LINE L1 498 727 -5813 235 278 186 0 chr5 102170834 102170931 -97459219 + L1MD1 LINE L1 575 689 -5851 6762 232 47 24 chr5 102171151 102174368 -97455782 + L1MD1 LINE L1 3349 6636 0 319 267 117 33 chr5 102174491 102174611 -97455539 - MIR SINE MIR -41 221 92 6810 68 5 0 chr5 102174728 102175813 -97454337 + L1PA7 LINE L1 5064 6152 -2 216 258 31 10 chr5 102176474 102176571 -97453579 + (TA)n Simple_repeat Simple_repeat 1 99 0 218 335 6 51 chr5 102177012 102177170 -97452980 + C-rich Low_complexity Low_complexity 6 156 0 447 19 0 0 chr5 102177596 102177648 -97452502 + (CTA)n Simple_repeat Simple_repeat 2 53 0 22 0 0 0 chr5 102178394 102178416 -97451734 + AT_rich Low_complexity Low_complexity 1 22 0 665 307 146 28 chr5 102178774 102179553 -97450597 + L2 LINE L2 2435 3313 0 245 148 148 0 chr5 102179651 102179705 -97450445 - MER45R DNA AcHobo -609 972 911 4281 202 86 83 chr5 102179751 102181326 -97448824 - MER45R DNA AcHobo -2 1579 1 922 106 106 0 chr5 102181404 102181555 -97448595 - L1MC2 LINE L1 -184 6160 5994 2234 110 0 7 chr5 102181866 102182174 -97447976 - AluSq SINE Alu -7 306 1 219 231 19 0 chr5 102182218 102182270 -97447880 + L2 LINE L2 3219 3271 -1 195 69 0 0 chr5 102182446 102182475 -97447675 + (CA)n Simple_repeat Simple_repeat 1 29 0 24 77 0 0 chr5 102183097 102183149 -97447001 + AT_rich Low_complexity Low_complexity 1 52 0 25 0 0 0 chr5 102183623 102183648 -97446502 + AT_rich Low_complexity Low_complexity 1 25 0 1711 178 7 3 chr5 102184895 102185193 -97444957 - AluJo SINE Alu -13 299 1 248 348 44 22 chr5 102188874 102189009 -97441141 - MIR3 SINE MIR -66 142 5 25835 56 5 8 chr5 102189035 102192382 -97437768 + L1PA4 LINE L1 3 3339 -2807 16806 38 1 0 chr5 102192663 102195491 -97434659 + L1PA4 LINE L1 3321 6152 -3 3207 93 14 5 chr5 102195620 102196060 -97434090 - MLT2A1 LTR ERVL 0 444 1 43231 75 12 10 chr5 102196060 102201705 -97428445 - HERVL-A1-A1 LTR ERVL 0 5654 1 3352 73 7 22 chr5 102201705 102202156 -97427994 - MLT2A1 LTR ERVL 0 444 1 302 388 50 0 chr5 102202216 102202337 -97427813 - L2 LINE L2 -9 3263 3137 23 0 0 0 chr5 102202389 102202412 -97427738 + AT_rich Low_complexity Low_complexity 1 23 0 402 333 64 35 chr5 102202796 102203186 -97426964 + L1ME LINE L1 5396 5805 -365 195 129 0 0 chr5 102203215 102203246 -97426904 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr5 102203507 102203531 -97426619 + AT_rich Low_complexity Low_complexity 1 24 0 30 27 0 0 chr5 102203542 102203579 -97426571 + AT_rich Low_complexity Low_complexity 1 37 0 403 316 107 20 chr5 102203605 102204102 -97426048 + L1ME2 LINE L1 3860 4399 -1747 330 26 0 0 chr5 102204398 102204437 -97425713 + (CA)n Simple_repeat Simple_repeat 2 40 0 311 329 44 52 chr5 102204449 102204701 -97425449 + L1ME2 LINE L1 4774 5023 -1123 352 276 56 77 chr5 102204717 102205003 -97425147 + L1ME2 LINE L1 4995 5274 -872 295 325 105 32 chr5 102205031 102205563 -97424587 + L1ME2 LINE L1 5311 5881 -283 28 79 0 0 chr5 102205888 102205951 -97424199 + AT_rich Low_complexity Low_complexity 1 63 0 4399 151 11 12 chr5 102206024 102206889 -97423261 + L1PA15 LINE L1 4746 5684 -481 1978 109 20 23 chr5 102206889 102207192 -97422958 + AluSx SINE Alu 1 302 -10 4399 151 11 12 chr5 102207192 102207673 -97422477 + L1PA15 LINE L1 5684 6164 -1 326 255 43 32 chr5 102207844 102207938 -97422212 - MER5B DNA MER1_type 0 178 84 183 349 16 0 chr5 102208294 102208357 -97421793 - MER5A DNA MER1_type -100 89 26 261 239 56 0 chr5 102208463 102208534 -97421616 + L1MC4 LINE L1 7824 7898 -144 259 176 15 15 chr5 102208551 102208619 -97421531 + GA-rich Low_complexity Low_complexity 1 68 0 844 203 7 0 chr5 102209087 102209240 -97420910 - FRAM SINE Alu -25 151 1 264 286 41 31 chr5 102209283 102209381 -97420769 - MER94 DNA DNA 0 134 36 629 316 61 55 chr5 102209728 102210187 -97419963 + L2 LINE L2 2852 3313 0 383 324 14 28 chr5 102210145 102210287 -97419863 + MIR SINE MIR 15 154 -108 * 21 0 0 0 chr5 102210296 102210317 -97419833 + AT_rich Low_complexity Low_complexity 1 21 0 269 349 57 47 chr5 102211978 102212170 -97417980 + MIR3 SINE MIR 2 195 -13 287 321 131 7 chr5 102212318 102212455 -97417695 - MIR3 SINE MIR -18 190 37 285 333 25 0 chr5 102212869 102212950 -97417200 - L2 LINE L2 -52 3220 3138 23 92 0 0 chr5 102212955 102213020 -97417130 + AT_rich Low_complexity Low_complexity 1 65 0 289 193 0 23 chr5 102213583 102213671 -97416479 + GA-rich Low_complexity Low_complexity 3 88 0 21 36 0 0 chr5 102215588 102215616 -97414534 + AT_rich Low_complexity Low_complexity 1 28 0 11611 168 161 15 chr5 102216669 102219004 -97411146 + L1MA3 LINE L1 12 2687 -4878 10101 163 30 12 chr5 102219012 102222109 -97408041 + L1MA3 LINE L1 4564 7714 -10 27 62 0 0 chr5 102222128 102222176 -97407974 + AT_rich Low_complexity Low_complexity 1 48 0 875 297 105 20 chr5 102223713 102224171 -97405979 - L1MC/D LINE L1 -1987 5821 5325 26 30 0 0 chr5 102224614 102224647 -97405503 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr5 102224805 102224827 -97405323 + AT_rich Low_complexity Low_complexity 1 22 0 214 273 45 0 chr5 102225368 102225434 -97404716 + MIR3 SINE MIR 138 206 -2 334 293 69 63 chr5 102227129 102227736 -97402414 + L1MB7 LINE L1 4408 5018 -1128 4533 164 37 17 chr5 102227841 102228060 -97402090 + L1MA8 LINE L1 5381 5594 -697 1682 204 3 0 chr5 102228060 102228369 -97401781 + AluJb SINE Alu 1 310 -2 4533 164 37 17 chr5 102228369 102229038 -97401112 + L1MA8 LINE L1 5594 6287 -4 21 36 0 0 chr5 102229039 102229067 -97401083 + AT_rich Low_complexity Low_complexity 1 28 0 718 177 0 8 chr5 102229517 102229641 -97400509 - AluJb SINE Alu -185 127 5 404 116 0 29 chr5 102229650 102229719 -97400431 - AluJo SINE Alu -14 298 232 * 507 252 6 31 chr5 102229715 102229874 -97400276 - AluJo SINE Alu -157 155 1 321 290 35 38 chr5 102229947 102230214 -97399936 + L1MB7 LINE L1 5679 5945 -239 429 231 17 26 chr5 102231484 102231601 -97398549 - MLT1K LTR MaLR -3 585 470 635 194 75 40 chr5 102231651 102231852 -97398298 + MER3 DNA MER1_type 1 208 -1 263 312 95 21 chr5 102231977 102232121 -97398029 - MLT1L LTR MaLR -345 243 118 21 0 0 0 chr5 102232717 102232738 -97397412 + AT_rich Low_complexity Low_complexity 1 21 0 198 286 0 0 chr5 102232966 102233015 -97397135 - L2 LINE L2 0 3313 3265 2086 104 76 20 chr5 102233197 102233552 -97396598 + THE1C LTR MaLR 1 375 0 383 370 119 24 chr5 102233628 102234325 -97395825 - L2 LINE L2 -367 2947 2185 748 259 99 52 chr5 102236189 102236608 -97393542 + MLT1F1 LTR MaLR 5 439 -128 269 51 26 0 chr5 102236633 102236672 -97393478 + (GA)n Simple_repeat Simple_repeat 1 40 0 365 253 24 0 chr5 102236675 102236758 -97393392 + MLT1F1 LTR MaLR 459 543 -50 472 328 50 8 chr5 102237617 102237858 -97392292 - L3b LINE CR1 -85 1498 1248 302 322 55 35 chr5 102238081 102238280 -97391870 - L3 LINE CR1 -272 1305 1103 208 74 56 56 chr5 102238479 102238533 -97391617 + (TTATA)n Simple_repeat Simple_repeat 4 57 0 312 268 67 134 chr5 102238744 102239057 -97391093 - MER77 LTR ERV1 -261 344 53 4490 282 87 15 chr5 102239066 102241206 -97388944 - L1MEc LINE L1 -4080 2316 22 1200 176 52 40 chr5 102241493 102241743 -97388407 + AluJo SINE Alu 1 253 -59 1953 125 45 23 chr5 102241931 102242284 -97387866 + THE1C LTR MaLR 15 375 0 22 35 0 0 chr5 102242361 102242390 -97387760 + AT_rich Low_complexity Low_complexity 1 29 0 2093 121 6 13 chr5 102242747 102243061 -97387089 + AluSx SINE Alu 1 312 0 369 352 19 6 chr5 102243174 102243336 -97386814 + MIR SINE MIR 25 188 -74 584 329 42 8 chr5 102243663 102243900 -97386250 - MIR SINE MIR -16 246 2 22 0 0 0 chr5 102244411 102244433 -97385717 + AT_rich Low_complexity Low_complexity 1 22 0 1622 50 31 22 chr5 102244837 102245059 -97385091 + L1PA5 LINE L1 5931 6154 0 5949 111 85 8 chr5 102245449 102246463 -97383687 + HERVH LTR ERV1 562 1653 -6060 1047 158 6 6 chr5 102246563 102246734 -97383416 - AluSp SINE Alu -142 171 1 515 119 63 168 chr5 102248151 102248294 -97381856 - MER20 DNA MER1_type -70 149 22 1798 173 16 0 chr5 102248786 102249092 -97381058 - AluJb SINE Alu -1 311 1 23 33 0 0 chr5 102249683 102249713 -97380437 + AT_rich Low_complexity Low_complexity 1 30 0 438 369 86 4 chr5 102250231 102250475 -97379675 + L2 LINE L2 2714 2977 -337 239 175 0 0 chr5 102250474 102250514 -97379636 + L2 LINE L2 3274 3313 0 * 2594 58 0 0 chr5 102250891 102251199 -97378951 - AluY SINE Alu -3 308 1 24 0 0 0 chr5 102251218 102251242 -97378908 + AT_rich Low_complexity Low_complexity 1 24 0 253 323 146 6 chr5 102251586 102251750 -97378400 + MIR SINE MIR 57 243 -19 181 106 43 128 chr5 102251937 102251984 -97378166 + L2 LINE L2 3224 3266 -6 603 190 93 4 chr5 102252698 102252852 -97377298 + L1MB1 LINE L1 6027 6167 -1 24 0 0 0 chr5 102252852 102252876 -97377274 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr5 102254277 102254304 -97375846 + AT_rich Low_complexity Low_complexity 1 27 0 216 0 0 0 chr5 102254538 102254562 -97375588 + (A)n Simple_repeat Simple_repeat 1 24 0 264 167 0 0 chr5 102257297 102257345 -97372805 + A-rich Low_complexity Low_complexity 1 48 0 209 374 11 11 chr5 102257348 102257439 -97372711 + MIR3 SINE MIR 110 200 -8 1556 141 25 94 chr5 102258042 102258404 -97371746 - MER1B DNA MER1_type 0 337 1 620 263 5 63 chr5 102259547 102259737 -97370413 + MLT1F LTR MaLR 4 182 -360 2137 115 0 22 chr5 102259786 102260100 -97370050 - AluSg SINE Alu -3 307 1 270 313 9 62 chr5 102260108 102260220 -97369930 + L2 LINE L2 3136 3241 -31 1773 162 52 27 chr5 102260316 102260644 -97369506 + MER1B DNA MER1_type 2 337 0 487 256 8 8 chr5 102260695 102260816 -97369334 + L1P LINE L1 1 121 -6025 1424 304 67 23 chr5 102460830 102461517 -97168633 - HERV16 LTR ERVL -2667 2329 1613 791 304 14 3 chr5 102461794 102462087 -97168063 - HERV16 LTR ERVL -3770 1226 931 761 238 15 29 chr5 102462122 102462328 -97167822 + MLT1B LTR MaLR 188 390 0 423 197 0 7 chr5 102463396 102463533 -97166617 + CT-rich Low_complexity Low_complexity 1 136 0 463 202 9 26 chr5 102463746 102463860 -97166290 - L1ME1 LINE L1 -7 6159 6048 3367 40 0 0 chr5 102463869 102464272 -97165878 - L1PA3 LINE L1 -3 6152 5750 475 84 14 0 chr5 102467525 102467596 -97162554 + THE1A LTR MaLR 284 355 0 357 311 184 26 chr5 102469248 102469515 -97160635 + L2 LINE L2 3005 3313 0 2291 61 10 3 chr5 102470015 102470312 -97159838 - AluY SINE Alu -12 299 1 902 171 38 80 chr5 102471168 102471431 -97158719 - L1MA8 LINE L1 -5 6286 6035 * 2216 151 3 3 chr5 102471427 102471818 -97158332 + L1MA6 LINE L1 5637 6027 -273 306 369 48 16 chr5 102472608 102472795 -97157355 - MIR3 SINE MIR -2 206 14 6867 129 24 6 chr5 102472807 102473833 -97156317 + L1PA8A LINE L1 4247 5315 -816 2181 88 10 7 chr5 102473833 102474140 -97156010 + AluY SINE Alu 1 308 -3 6867 129 24 6 chr5 102474140 102474973 -97155177 + L1PA8A LINE L1 5315 6131 0 33320 47 1 2 chr5 102475522 102479841 -97150309 - L1P LINE L1 -1828 4318 3 247 313 15 0 chr5 102479841 102479908 -97150242 - AluJ/FLAM SINE Alu -233 69 2 184 250 12 60 chr5 102480263 102480347 -97149803 - MER5C DNA MER1_type -204 120 41 604 338 59 0 chr5 102480429 102480648 -97149502 - MIR SINE MIR 0 262 31 201 162 0 0 chr5 102480703 102480740 -97149410 + A-rich Low_complexity Low_complexity 1 37 0 1413 156 11 25 chr5 102482106 102482381 -97147769 + THE1A LTR MaLR 1 271 -84 216 158 0 0 chr5 102482389 102482427 -97147723 + T-rich Low_complexity Low_complexity 1 38 0 6958 224 25 22 chr5 102483690 102485679 -97144471 - L1 LINE L1 -1773 4373 2380 1600 164 65 35 chr5 102485680 102485939 -97144211 - MSTC LTR MaLR -62 356 94 1833 155 7 3 chr5 102485939 102486235 -97143915 - AluSx SINE Alu -15 297 1 1600 164 65 35 chr5 102486235 102486322 -97143828 - MSTC LTR MaLR -324 94 11 307 304 32 0 chr5 102486726 102486884 -97143266 - MER103 DNA DNA -1 165 3 503 302 108 55 chr5 102488682 102488757 -97141393 + L2 LINE L2 2950 3020 -293 1881 185 42 17 chr5 102488757 102489113 -97141037 - MLT1A1 LTR MaLR 0 365 1 503 302 108 55 chr5 102489113 102489381 -97140769 + L2 LINE L2 3020 3311 -2 701 215 40 6 chr5 102489563 102489740 -97140410 + MER58A DNA MER1_type 42 224 0 1766 171 18 0 chr5 102490063 102490344 -97139806 - AluJb SINE Alu -26 286 1 227 351 11 0 chr5 102490448 102490542 -97139608 + L2 LINE L2 2565 2659 -655 563 260 53 0 chr5 102490572 102490722 -97139428 - MER5A DNA MER1_type -1 188 31 469 279 100 13 chr5 102491332 102491561 -97138589 + L1ME LINE L1 5522 5770 -351 264 319 43 0 chr5 102492176 102492270 -97137880 + MIR SINE MIR 2 99 -163 246 198 0 74 chr5 102492371 102492452 -97137698 - L1MD3 LINE L1 -1997 5998 5924 1006 228 40 5 chr5 102492453 102492851 -97137299 + L1ME LINE L1 5144 5554 -608 1957 133 34 57 chr5 102493338 102493722 -97136428 - THE1C LTR MaLR 0 375 1 1479 172 40 7 chr5 102493903 102494176 -97135974 + AluJb SINE Alu 12 293 -19 2272 150 6 3 chr5 102494375 102494736 -97135414 + THE1B LTR MaLR 1 362 -2 3957 113 5 5 chr5 102494736 102495389 -97134761 - L1PA8 LINE L1 -905 5241 4589 6577 73 15 13 chr5 102495390 102495955 -97134195 + L1PA8 LINE L1 5254 5823 -349 2263 125 0 0 chr5 102495955 102496266 -97133884 + AluSx SINE Alu 1 311 -1 6577 73 15 13 chr5 102496266 102496614 -97133536 + L1PA8 LINE L1 5823 6169 -3 5607 198 77 59 chr5 102496765 102497841 -97132309 + L1MC3 LINE L1 6016 7211 -574 320 234 0 13 chr5 102497841 102497918 -97132232 + MLT1F1 LTR MaLR 49 124 -443 5607 198 77 59 chr5 102497918 102498495 -97131655 + L1MC3 LINE L1 7211 7776 -9 21 36 0 0 chr5 102498719 102498747 -97131403 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 102500061 102500084 -97130066 + AT_rich Low_complexity Low_complexity 1 23 0 272 27 27 0 chr5 102500445 102500482 -97129668 + (TG)n Simple_repeat Simple_repeat 1 38 0 300 53 0 0 chr5 102502032 102502070 -97128080 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 356 322 50 35 chr5 102502841 102503040 -97127110 + MIR SINE MIR 20 221 -41 185 321 0 0 chr5 102503582 102503635 -97126515 + L2 LINE L2 3007 3059 -213 273 255 142 0 chr5 102503938 102504044 -97126106 + MLT1J2 LTR MaLR 40 160 -290 433 277 36 0 chr5 102504355 102504492 -97125658 + LTR16A LTR ERVL 297 438 -12 1786 41 0 0 chr5 102504547 102504766 -97125384 + L1PA5 LINE L1 5929 6147 -7 232 214 0 0 chr5 102504950 102504992 -97125158 + MIR SINE MIR 113 154 -108 279 79 0 0 chr5 102505117 102505155 -97124995 + (CCA)n Simple_repeat Simple_repeat 1 38 0 2070 132 71 13 chr5 102507457 102507851 -97122299 - MSTA LTR MaLR -11 417 1 1130 274 131 12 chr5 102507851 102508521 -97121629 + L2 LINE L2 2551 3312 -1 320 378 64 20 chr5 102509070 102509274 -97120876 - L3 LINE CR1 -2 1575 1363 207 308 203 21 chr5 102510184 102510327 -97119823 + MIR3 SINE MIR 30 198 -10 332 297 67 19 chr5 102510634 102510843 -97119307 + LTR33 LTR ERVL 298 516 -5 232 196 20 0 chr5 102511491 102511542 -97118608 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 350 275 178 74 chr5 102511809 102512118 -97118032 + L2 LINE L2 2937 3277 -36 29 0 0 0 chr5 102512124 102512153 -97117997 + AT_rich Low_complexity Low_complexity 1 29 0 196 212 59 47 chr5 102512201 102512286 -97117864 - L2 LINE L2 -229 3084 2999 907 220 43 0 chr5 102512506 102512715 -97117435 + MER20 DNA MER1_type 2 219 0 512 223 11 0 chr5 102512921 102513015 -97117135 - Tigger7 DNA MER2_type 0 2587 2493 822 207 0 4 chr5 102513019 102513206 -97116944 - Tigger7 DNA MER2_type -2220 267 1 1547 212 128 0 chr5 102513251 102513596 -97116554 - MSTD LTR MaLR -7 389 1 1981 169 17 15 chr5 102513851 102514317 -97115833 - L1MB1 LINE L1 -2 6166 5731 249 180 0 0 chr5 102514317 102514367 -97115783 + (CA)n Simple_repeat Simple_repeat 1 50 0 4586 174 42 13 chr5 102514424 102515367 -97114783 - L1MA8 LINE L1 -1 6290 5320 2133 152 0 27 chr5 102515376 102515744 -97114406 - L1PB3 LINE L1 -8 6146 5789 180 176 0 0 chr5 102515744 102515778 -97114372 + (TG)n Simple_repeat Simple_repeat 2 35 0 912 127 0 7 chr5 102515783 102515925 -97114225 - L1PB3 LINE L1 -363 5791 5651 367 141 59 35 chr5 102515908 102515993 -97114157 - L1M3 LINE L1 -526 5808 5722 * 21 36 0 0 chr5 102516850 102516878 -97113272 + AT_rich Low_complexity Low_complexity 1 28 0 2388 151 82 44 chr5 102517024 102517377 -97112773 - L1MC2 LINE L1 -9 6335 5952 2286 66 42 0 chr5 102517377 102517666 -97112484 - AluY SINE Alu -10 301 1 2388 151 82 44 chr5 102517666 102517861 -97112289 - L1MC2 LINE L1 -392 5952 5766 233 297 0 0 chr5 102518476 102518550 -97111600 + (TA)n Simple_repeat Simple_repeat 2 75 0 200 288 14 27 chr5 102522232 102522305 -97107845 - L2 LINE L2 -13 3259 3188 2433 146 25 37 chr5 102522451 102522884 -97107266 - MSTA LTR MaLR 0 428 1 207 69 0 0 chr5 102524464 102524493 -97105657 + (TTTTTA)n Simple_repeat Simple_repeat 6 34 0 6468 249 62 52 chr5 102524517 102527570 -97102580 - L1ME1 LINE L1 -2 6959 3997 1820 166 3 0 chr5 102527570 102527883 -97102267 - AluSx SINE Alu 0 314 1 6468 249 62 52 chr5 102527883 102528321 -97101829 - L1ME1 LINE L1 -2964 3997 3565 359 326 78 59 chr5 102528324 102528711 -97101439 - L1ME1 LINE L1 -5212 1211 818 871 302 93 43 chr5 102529434 102529874 -97100276 - LTR16B LTR ERVL -2 462 1 258 179 0 0 chr5 102531231 102531270 -97098880 - MER2 DNA MER2_type -305 40 2 2193 226 53 29 chr5 102531271 102531927 -97098223 + L1MD2 LINE L1 5688 6359 0 321 289 154 0 chr5 102531927 102532031 -97098119 - MER5B DNA MER1_type -54 124 5 231 195 24 0 chr5 102532181 102532222 -97097928 - MER2 DNA MER2_type -292 53 12 259 226 0 0 chr5 102532222 102532275 -97097875 + L1MC/D LINE L1 5688 5740 -619 218 306 10 41 chr5 102533049 102533147 -97097003 - L2 LINE L2 -241 3031 2937 23 0 0 0 chr5 102534246 102534269 -97095881 + AT_rich Low_complexity Low_complexity 1 23 0 260 255 38 94 chr5 102534812 102534918 -97095232 - MER5B DNA MER1_type -1 177 78 3457 129 13 15 chr5 102536619 102537146 -97093004 - MER1A DNA MER1_type -1 526 1 22 0 0 0 chr5 102538828 102538850 -97091300 + AT_rich Low_complexity Low_complexity 1 22 0 627 246 55 22 chr5 102540028 102540211 -97089939 + MER5A DNA MER1_type 1 189 0 1504 181 29 7 chr5 102540828 102541104 -97089046 + AluJo SINE Alu 1 282 -30 452 143 12 0 chr5 102541108 102541192 -97088958 + GA-rich Low_complexity Low_complexity 3 87 0 202 200 0 0 chr5 102542637 102542672 -97087478 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr5 102543745 102543767 -97086383 + AT_rich Low_complexity Low_complexity 1 22 0 306 349 24 8 chr5 102544606 102544732 -97085418 - MIR3 SINE MIR -2 206 79 263 403 36 60 chr5 102545278 102545526 -97084624 - L2 LINE L2 -25 3247 3006 406 313 54 9 chr5 102545848 102545960 -97084190 - L2 LINE L2 0 3313 3197 251 158 40 66 chr5 102547618 102547694 -97082456 + L1MB3 LINE L1 6110 6183 0 429 278 111 11 chr5 102547745 102547925 -97082225 + MIR SINE MIR 52 249 -13 2311 144 48 20 chr5 102548448 102548886 -97081264 + LTR7 LTR ERV1 1 450 0 17616 181 23 24 chr5 102548887 102550017 -97080133 + HERVH LTR ERV1 2 1132 -6581 2422 76 3 13 chr5 102550017 102550331 -97079819 - AluY SINE Alu 0 311 1 17616 181 23 24 chr5 102550331 102552887 -97077263 + HERVH LTR ERV1 1132 3993 -3720 3391 167 2 2 chr5 102552904 102553486 -97076664 + HERVH LTR ERV1 3994 4548 -3171 2496 168 2 5 chr5 102553481 102553915 -97076235 + HERVH LTR ERV1 6516 6948 -765 * 335 109 0 78 chr5 102553901 102553965 -97076185 + HERVH LTR ERV1 7655 7713 0 * 3481 124 7 9 chr5 102553966 102554506 -97075644 + HERVH LTR ERV1 7173 7711 -2 2147 136 0 0 chr5 102554506 102554808 -97075342 + AluY SINE Alu 1 302 -9 2324 149 38 23 chr5 102554816 102555259 -97074891 + LTR7 LTR ERV1 1 450 0 2018 137 76 17 chr5 102555318 102555662 -97074488 - THE1B LTR MaLR 0 364 1 11594 101 6 1 chr5 102555667 102557233 -97072917 - THE1B-int LTR MaLR -6 1574 1 2030 145 72 17 chr5 102557233 102557578 -97072572 - THE1B LTR MaLR 0 364 1 1124 299 107 16 chr5 102557702 102558067 -97072083 - LTR16A LTR ERVL 0 450 53 192 360 0 0 chr5 102559100 102559150 -97071000 - MIR SINE MIR -157 105 56 34 24 0 0 chr5 102559319 102559360 -97070790 + AT_rich Low_complexity Low_complexity 1 41 0 24 0 0 0 chr5 102559552 102559576 -97070574 + AT_rich Low_complexity Low_complexity 1 24 0 2064 118 31 3 chr5 102559936 102560224 -97069926 - AluSx SINE Alu -16 296 1 22 35 0 0 chr5 102560428 102560457 -97069693 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr5 102560536 102560566 -97069584 + AT_rich Low_complexity Low_complexity 1 30 0 1085 80 0 53 chr5 102560598 102560748 -97069402 + AluSg/x SINE Alu 152 293 -19 24 67 0 0 chr5 102561305 102561350 -97068800 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr5 102561703 102561725 -97068425 + AT_rich Low_complexity Low_complexity 1 22 0 1973 244 15 54 chr5 102561990 102562584 -97067566 + L1MA8 LINE L1 467 1037 -6452 13281 184 69 31 chr5 102562628 102565088 -97065062 + L1MA8 LINE L1 3062 5759 -1951 2100 108 3 3 chr5 102565088 102565383 -97064767 + AluSx SINE Alu 1 295 -17 13281 184 69 31 chr5 102565383 102566949 -97063201 + L1MA8 LINE L1 5759 7264 -446 305 263 120 113 chr5 102567112 102567553 -97062597 + HAL1b LINE L1 292 735 -613 22 0 0 0 chr5 102567572 102567594 -97062556 + AT_rich Low_complexity Low_complexity 1 22 0 227 317 49 89 chr5 102567786 102568032 -97062118 + L1MC4 LINE L1 6493 6728 -1314 205 316 0 0 chr5 102568653 102568710 -97061440 - MIR SINE MIR -108 154 98 1997 107 7 0 chr5 102570112 102570383 -97059767 - AluSx SINE Alu -39 273 1 21 57 0 0 chr5 102570723 102570758 -97059392 + AT_rich Low_complexity Low_complexity 1 35 0 229 329 31 31 chr5 102571900 102572061 -97058089 - MLT1J2 LTR MaLR -23 427 267 480 280 220 10 chr5 102572531 102572731 -97057419 + MIR SINE MIR 8 249 -13 214 419 59 5 chr5 102572767 102572918 -97057232 + L2 LINE L2 2744 2908 -406 219 69 0 0 chr5 102572918 102572947 -97057203 + (TTGG)n Simple_repeat Simple_repeat 4 32 0 214 419 59 5 chr5 102572947 102572981 -97057169 + L2 LINE L2 2908 2939 -375 2360 87 0 3 chr5 102573195 102573504 -97056646 + AluSp SINE Alu 1 308 -5 317 262 146 10 chr5 102573530 102573633 -97056517 - MIR SINE MIR -143 119 3 8628 44 0 1 chr5 102574011 102575853 -97054297 + L1PA3 LINE L1 4311 6152 -3 22 0 0 0 chr5 102575853 102575875 -97054275 + AT_rich Low_complexity Low_complexity 1 22 0 300 174 0 0 chr5 102575891 102575937 -97054213 + FAM SINE Alu 56 101 -74 12464 184 30 57 chr5 102575941 102580120 -97050030 + L1MA4 LINE L1 6 4033 -2449 328 88 12 175 chr5 102580120 102580200 -97049950 + MADE1 DNA Mariner 9 75 -5 12464 184 30 57 chr5 102580200 102582229 -97047921 + L1MA4 LINE L1 4033 6115 -367 1102 211 91 46 chr5 102582296 102582712 -97047438 - Charlie1b DNA MER1_type -57 466 32 234 91 0 0 chr5 102583903 102583936 -97046214 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2238 88 0 3 chr5 102584073 102584387 -97045763 - AluSp SINE Alu 0 313 1 839 184 112 72 chr5 102584527 102584777 -97045373 + ORSL DNA AcHobo 1 260 -15 5186 250 41 34 chr5 102584780 102587976 -97042174 - L1PA13 LINE L1 -3125 3672 41 191 288 68 27 chr5 102588948 102589021 -97041129 + L2 LINE L2 3148 3223 -49 646 144 9 0 chr5 102589258 102589369 -97040781 + L1PA15 LINE L1 6045 6156 -9 203 348 85 25 chr5 102589826 102589944 -97040206 + L2 LINE L2 3147 3271 -1 601 263 59 12 chr5 102590022 102590358 -97039792 + L1MC5 LINE L1 7250 7509 -452 528 283 72 43 chr5 102590405 102590681 -97039469 + L1MC5 LINE L1 7609 7892 -69 229 274 48 12 chr5 102590697 102590781 -97039369 + MIR SINE MIR 175 261 -1 421 268 30 30 chr5 102590858 102591022 -97039128 + L1ME LINE L1 867 1030 -5901 551 267 57 22 chr5 102591537 102591828 -97038322 + L1ME LINE L1 1300 1532 -4891 23 33 0 0 chr5 102591829 102591859 -97038291 + AT_rich Low_complexity Low_complexity 1 30 0 1394 192 31 27 chr5 102593019 102593311 -97036839 + AluJo SINE Alu 1 293 -19 624 180 0 0 chr5 102593449 102593571 -97036579 + L1PB4 LINE L1 6032 6153 -3 310 335 94 16 chr5 102595224 102595409 -97034741 - MIR SINE MIR -63 145 1 595 295 132 0 chr5 102595782 102595972 -97034178 - MIR SINE MIR 0 262 48 4706 154 38 54 chr5 102596602 102598485 -97031665 - L1MA8 LINE L1 -86 6205 4353 1888 256 62 7 chr5 102598542 102599137 -97031013 - L1MEc LINE L1 -5341 1055 428 866 229 133 35 chr5 102599143 102599623 -97030527 + L1ME LINE L1 556 1082 -4988 243 147 0 59 chr5 102599623 102599691 -97030459 - LTR66 LTR ERVL -152 458 395 243 170 0 0 chr5 102599738 102599785 -97030365 + (TA)n Simple_repeat Simple_repeat 1 47 0 35 0 0 0 chr5 102599828 102599863 -97030287 + AT_rich Low_complexity Low_complexity 1 35 0 938 235 94 35 chr5 102599869 102600295 -97029855 + L1ME LINE L1 1129 1579 -4501 740 250 0 28 chr5 102601473 102601649 -97028501 - MER45A DNA AcHobo 0 178 8 838 326 53 27 chr5 102602463 102603325 -97026825 - L1ME3A LINE L1 -290 5880 4999 329 318 19 9 chr5 102603563 102603670 -97026480 + L3 LINE CR1 1374 1481 -96 506 262 0 60 chr5 102605568 102605717 -97024433 - MIR SINE MIR -17 245 106 239 292 62 0 chr5 102607349 102607414 -97022736 + L1MC4 LINE L1 5743 5811 -1997 253 250 80 0 chr5 102607421 102607509 -97022641 - L1MC4 LINE L1 -1334 6708 6614 230 282 35 0 chr5 102607435 102607520 -97022630 + L1MC4 LINE L1 6615 6702 -1340 * 209 136 0 23 chr5 102607521 102607565 -97022585 + (TA)n Simple_repeat Simple_repeat 2 44 0 25 0 0 0 chr5 102607975 102608000 -97022150 + AT_rich Low_complexity Low_complexity 1 25 0 5950 156 16 1 chr5 102608429 102609492 -97020658 - L1MA3 LINE L1 -8 7716 6638 258 163 0 0 chr5 102609490 102609539 -97020611 - L1P LINE L1 -1463 4683 4635 * 2029 93 66 18 chr5 102609536 102609870 -97020280 - L1M1 LINE L1 -4981 2584 2235 1105 213 35 16 chr5 102609859 102610113 -97020037 - L1M1 LINE L1 -7294 271 13 * 19559 173 23 37 chr5 102610111 102614341 -97015809 - L1MA3 LINE L1 -3313 4252 116 1427 213 7 11 chr5 102614341 102614628 -97015522 - AluJb SINE Alu -25 287 2 19559 173 23 37 chr5 102614628 102614727 -97015423 - L1MA3 LINE L1 -7449 116 17 327 25 0 0 chr5 102615763 102615803 -97014347 + (CA)n Simple_repeat Simple_repeat 2 41 0 417 324 50 17 chr5 102615956 102616135 -97014015 - MIR3 SINE MIR -6 202 18 188 253 162 40 chr5 102617343 102617442 -97012708 - MIR SINE MIR 0 262 152 578 255 61 26 chr5 102620472 102620703 -97009447 + MER112 DNA MER1_type 1 239 -21 28 29 0 0 chr5 102621283 102621318 -97008832 + AT_rich Low_complexity Low_complexity 1 35 0 31 0 6 0 chr5 102621370 102621435 -97008715 + AT_rich Low_complexity Low_complexity 1 31 0 4125 151 46 17 chr5 102621846 102622619 -97007531 - Ricksha DNA DNA -8 3243 2445 8093 24 1 1 chr5 102622619 102623514 -97006636 + L1PA3 LINE L1 5261 6155 0 4125 151 46 17 chr5 102623514 102623548 -97006602 - Ricksha DNA DNA -806 2445 2413 * 4955 129 14 20 chr5 102623537 102624327 -97005823 - Ricksha DNA DNA -774 2472 1688 298 70 47 0 chr5 102624326 102624369 -97005781 - Ricksha DNA DNA -2962 284 240 * 673 206 99 0 chr5 102624361 102624502 -97005648 - Ricksha_a DNA DNA -1025 156 2 1881 253 57 25 chr5 102624692 102625205 -97004945 - MLT1F LTR MaLR -13 529 1 185 313 76 35 chr5 102626222 102626366 -97003784 + MIR SINE MIR 12 161 -101 246 229 31 0 chr5 102626938 102627034 -97003116 + (TA)n Simple_repeat Simple_repeat 1 99 0 315 0 0 0 chr5 102627034 102627069 -97003081 + (TG)n Simple_repeat Simple_repeat 2 36 0 1079 187 0 0 chr5 102628260 102628442 -97001708 - MLT1F1 LTR MaLR 0 567 386 398 281 67 22 chr5 102628770 102628905 -97001245 - MLT1F1 LTR MaLR -250 317 177 285 207 0 0 chr5 102628907 102628994 -97001156 + GA-rich Low_complexity Low_complexity 2 88 0 2258 163 18 135 chr5 102629442 102629669 -97000481 + MLT1D LTR MaLR 1 253 -252 2410 96 0 0 chr5 102629669 102629972 -97000178 + AluSg SINE Alu 1 303 -7 2258 163 18 135 chr5 102629972 102630316 -96999834 + MLT1D LTR MaLR 253 505 0 189 0 0 0 chr5 102631302 102631323 -96998827 + (A)n Simple_repeat Simple_repeat 1 21 0 2723 88 25 22 chr5 102633303 102633666 -96996484 + THE1B LTR MaLR 1 364 0 1042 183 17 0 chr5 102634055 102634230 -96995920 - MER45A DNA AcHobo 0 178 1 216 333 29 75 chr5 102685365 102685539 -96944611 + MIR SINE MIR 47 212 -50 286 287 11 11 chr5 102686189 102686276 -96943874 - MLT1J2 LTR MaLR 0 450 364 322 169 67 45 chr5 102686410 102686499 -96943651 - MLT1J2 LTR MaLR -296 154 64 942 300 70 5 chr5 102687836 102688239 -96941911 + LTR16B LTR ERVL 35 463 -1 1796 335 49 13 chr5 102688285 102689330 -96940820 + HERV16 LTR ERVL 104 1185 -3811 2386 301 63 38 chr5 102689774 102690296 -96939854 + HERV16 LTR ERVL 1854 2362 -2634 2065 136 12 35 chr5 102690296 102690641 -96939509 - MER1B DNA MER1_type 0 337 1 2386 301 63 38 chr5 102690641 102691950 -96938200 + HERV16 LTR ERVL 2362 3555 -1441 4003 137 49 80 chr5 102691959 102692769 -96937381 + LTR1 LTR ERV1 1 785 0 533 250 29 58 chr5 102692778 102693018 -96937132 + HERV16 LTR ERVL 3323 3555 -1441 796 329 35 37 chr5 102693052 102693569 -96936581 + HERV16 LTR ERVL 3878 4393 -1371 2522 123 0 2 chr5 102693580 102693979 -96936171 + L1PA4 LINE L1 5388 5785 -380 7723 173 35 8 chr5 102694056 102694562 -96935588 + L1PBa LINE L1 1398 1889 -4973 2132 45 0 4 chr5 102694562 102694829 -96935321 + L1PA4 LINE L1 5887 6152 -3 7723 173 35 8 chr5 102694829 102697459 -96932691 + L1PBa LINE L1 1889 4617 -2245 1145 51 13 0 chr5 102697457 102697614 -96932536 - L1PA8A LINE L1 -242 5889 5731 * 2584 111 45 76 chr5 102697614 102697720 -96932430 + L1PB1 LINE L1 5678 5786 -365 214 29 57 0 chr5 102697720 102697755 -96932395 + (TA)n Simple_repeat Simple_repeat 1 37 0 2584 111 45 76 chr5 102697755 102698134 -96932016 + L1PB1 LINE L1 5786 6149 -2 2318 121 54 0 chr5 102698139 102698510 -96931640 + L1PA15 LINE L1 5775 6165 0 227 352 0 0 chr5 102700033 102700104 -96930046 - L2 LINE L2 -217 3055 2985 251 246 49 66 chr5 102700171 102700293 -96929857 + MIR SINE MIR 95 214 -48 251 374 108 7 chr5 102700501 102700640 -96929510 - L2 LINE L2 -4 3268 3116 286 128 0 0 chr5 102701394 102701441 -96928709 + MADE1 DNA Mariner 1 47 -33 389 323 20 26 chr5 102701683 102701878 -96928272 - MLT1I LTR MaLR -197 212 19 1920 95 7 22 chr5 102703493 102703767 -96926383 + AluSc SINE Alu 30 299 -10 24 0 0 0 chr5 102704109 102704133 -96926017 + AT_rich Low_complexity Low_complexity 1 24 0 1395 105 37 77 chr5 102704538 102704863 -96925287 - L1MA9 LINE L1 0 6312 6001 487 360 11 6 chr5 102705234 102705409 -96924741 - MIR SINE MIR -42 220 45 985 228 61 9 chr5 102705853 102706081 -96924069 + MIR SINE MIR 2 241 -21 520 312 74 0 chr5 102707356 102707571 -96922579 - MIR SINE MIR 0 262 32 180 341 30 30 chr5 102707824 102707956 -96922194 - L2 LINE L2 -335 2978 2847 679 250 11 6 chr5 102708333 102708509 -96921641 + MER5B DNA MER1_type 1 177 -1 4869 85 12 0 chr5 102708947 102709603 -96920547 + L1PA11 LINE L1 5508 6171 -3 2816 10 0 0 chr5 102710100 102710405 -96919745 + AluY SINE Alu 1 305 -6 593 285 32 95 chr5 102711113 102711429 -96918721 - L2 LINE L2 0 3272 2977 24 53 0 0 chr5 102713014 102713052 -96917098 + AT_rich Low_complexity Low_complexity 1 38 0 2180 95 0 14 chr5 102713754 102714049 -96916101 + AluSx SINE Alu 11 301 -11 283 367 39 8 chr5 102714395 102714523 -96915627 - L2 LINE L2 -3 3310 3179 375 23 0 0 chr5 102715782 102715826 -96914324 + (CA)n Simple_repeat Simple_repeat 1 44 0 30 0 0 0 chr5 102716017 102716047 -96914103 + AT_rich Low_complexity Low_complexity 1 30 0 2029 147 0 7 chr5 102716775 102717075 -96913075 + AluSx SINE Alu 1 298 -14 423 335 21 5 chr5 102717234 102717428 -96912722 - MER117 DNA MER1_type 0 197 1 501 280 8 0 chr5 102717545 102717663 -96912487 + MER58A DNA MER1_type 1 119 0 1404 104 14 0 chr5 102718020 102718240 -96911910 - L1MA5 LINE L1 0 6300 6078 2067 133 30 33 chr5 102718301 102718669 -96911481 - L1MA5 LINE L1 -224 6076 5710 770 191 162 15 chr5 102720401 102720605 -96909545 + MIR SINE MIR 12 245 -17 209 207 0 52 chr5 102720913 102720971 -96909179 + A-rich Low_complexity Low_complexity 1 55 0 427 353 22 16 chr5 102721772 102721956 -96908194 - MER5A DNA MER1_type -3 186 2 192 392 31 8 chr5 102722419 102722549 -96907601 - L2 LINE L2 -467 2847 2715 469 304 80 0 chr5 102722789 102722927 -96907223 - L2 LINE L2 -5 3308 3160 564 226 190 62 chr5 102723043 102723269 -96906881 + Charlie8 DNA MER1_type 1 255 -2162 281 312 0 0 chr5 102723343 102723420 -96906730 + Charlie8 DNA MER1_type 2339 2415 -2 269 272 107 70 chr5 102723681 102723953 -96906197 + L2 LINE L2 2951 3232 -40 188 322 0 0 chr5 102724540 102724599 -96905551 - MIR SINE MIR -128 134 76 34 0 0 0 chr5 102724898 102724932 -96905218 + AT_rich Low_complexity Low_complexity 1 34 0 326 249 24 160 chr5 102725678 102725891 -96904259 + MER5A DNA MER1_type 1 184 -5 298 301 36 0 chr5 102726000 102726083 -96904067 - L2 LINE L2 -46 3267 3182 28 29 0 0 chr5 102727360 102727395 -96902755 + AT_rich Low_complexity Low_complexity 1 35 0 208 296 0 0 chr5 102728158 102728212 -96901938 + L3 LINE CR1 1220 1273 -304 287 313 102 0 chr5 102728262 102728390 -96901760 - MIR SINE MIR -15 247 107 1041 259 170 53 chr5 102728447 102729043 -96901107 + L2 LINE L2 2394 3050 -263 1895 123 4 11 chr5 102729204 102729473 -96900677 - AluSx SINE Alu -45 267 1 1233 156 83 0 chr5 102729713 102729931 -96900219 + MER46A DNA MER2_type 1 236 0 36 0 0 0 chr5 102730067 102730103 -96900047 + AT_rich Low_complexity Low_complexity 1 36 0 700 249 124 0 chr5 102730789 102730990 -96899160 + MLT2E LTR ERVL 1 226 -402 190 143 0 71 chr5 102731499 102731555 -96898595 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 620 204 30 8 chr5 102731555 102731687 -96898463 - MER4C LTR ERV1 0 465 331 615 159 114 182 chr5 102731743 102732101 -96898049 - MER4C LTR ERV1 -122 343 10 226 185 46 15 chr5 102732101 102732166 -96897984 + (TA)n Simple_repeat Simple_repeat 1 67 0 203 162 0 0 chr5 102732165 102732202 -96897948 + GA-rich Low_complexity Low_complexity 2 38 0 * 281 320 44 84 chr5 102732242 102732586 -96897564 + L2 LINE L2 2938 3267 -5 198 219 0 0 chr5 102732802 102732843 -96897307 - MER5B DNA MER1_type -7 171 131 1722 133 37 14 chr5 102732907 102733035 -96897115 + AluSq SINE Alu 3 126 -187 2155 116 3 0 chr5 102733035 102733329 -96896821 + AluSg SINE Alu 1 295 -15 1722 133 37 14 chr5 102733329 102733494 -96896656 + AluSq SINE Alu 126 303 -10 26 30 0 0 chr5 102733755 102733788 -96896362 + AT_rich Low_complexity Low_complexity 1 33 0 2247 116 0 7 chr5 102734267 102734570 -96895580 + AluSx SINE Alu 1 301 -11 2192 109 3 0 chr5 102735214 102735507 -96894643 + AluY SINE Alu 1 294 -17 7037 152 18 20 chr5 102735979 102736200 -96893950 + L1PB1 LINE L1 3754 3974 -2177 7668 18 3 4 chr5 102736200 102737126 -96893024 + L1PA3 LINE L1 5231 6155 0 7037 152 18 20 chr5 102737126 102739312 -96890838 + L1PB1 LINE L1 3974 6148 -3 254 48 71 0 chr5 102739394 102739436 -96890714 + CT-rich Low_complexity Low_complexity 5 49 0 219 36 0 0 chr5 102739438 102739466 -96890684 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 748 231 0 0 chr5 102739467 102739610 -96890540 - FRAM SINE Alu -33 143 1 1321 212 59 59 chr5 102740955 102741049 -96889101 - MER39 LTR ERV1 -59 648 555 2262 115 3 0 chr5 102741049 102741353 -96888797 + AluSx SINE Alu 1 305 -7 1321 212 59 59 chr5 102741353 102741710 -96888440 - MER39 LTR ERV1 -152 555 9 216 0 0 0 chr5 102741876 102741900 -96888250 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 603 253 100 4 chr5 102742382 102742605 -96887545 + L1MC4 LINE L1 6439 6689 -1325 25 0 0 0 chr5 102742609 102742634 -96887516 + AT_rich Low_complexity Low_complexity 1 25 0 2701 96 11 8 chr5 102745197 102745571 -96884579 + THE1C LTR MaLR 1 375 0 6335 174 24 22 chr5 102745885 102746874 -96883276 - L1PA13 LINE L1 -14 6149 5163 2146 112 3 3 chr5 102746874 102747168 -96882982 - AluSc SINE Alu -14 295 2 6335 174 24 22 chr5 102747168 102748263 -96881887 - L1PA13 LINE L1 -1000 5163 4056 1926 139 24 3 chr5 102748461 102748755 -96881395 + AluSx SINE Alu 1 300 -12 34 24 0 0 chr5 102748932 102748973 -96881177 + AT_rich Low_complexity Low_complexity 1 41 0 1373 243 0 7 chr5 102749148 102749432 -96880718 + AluJo SINE Alu 1 282 -30 10168 88 2 5 chr5 102749440 102751631 -96878519 + L1PA7 LINE L1 3953 6148 -6 2228 110 3 0 chr5 102751708 102752016 -96878134 - AluSp SINE Alu -4 309 1 279 0 0 0 chr5 102753700 102753731 -96876419 + (TC)n Simple_repeat Simple_repeat 1 31 0 3894 35 0 0 chr5 102755589 102756079 -96874071 + L1PA3 LINE L1 5679 6168 0 2119 126 0 10 chr5 102757641 102757943 -96872207 + AluSx SINE Alu 1 299 -13 811 196 0 0 chr5 102758777 102758910 -96871240 - FLAM_C SINE Alu 0 133 1 881 226 41 36 chr5 102758911 102759132 -96871018 + MLT1J1 LTR MaLR 36 257 -189 898 269 25 4 chr5 102759850 102760095 -96870055 + MIR SINE MIR 13 262 0 1904 169 7 0 chr5 102760891 102761192 -96868958 + AluSx SINE Alu 1 303 -9 769 164 0 0 chr5 102761235 102761357 -96868793 - FLAM_C SINE Alu -21 122 1 198 294 63 71 chr5 102761767 102761893 -96868257 + MIR SINE MIR 132 256 -6 1754 161 23 13 chr5 102761948 102762253 -96867897 + AluJb SINE Alu 5 312 0 22 35 0 0 chr5 102764040 102764069 -96866081 + AT_rich Low_complexity Low_complexity 1 29 0 2889 217 23 19 chr5 102764477 102765127 -96865023 - MER82 DNA MER2_type 0 653 1 1098 62 0 0 chr5 102767109 102767434 -96862716 + AluSp SINE Alu 3 327 0 2231 221 98 75 chr5 102767480 102768617 -96861533 + L1MEc LINE L1 163 1322 -4893 1246 236 42 2 chr5 102768598 102768944 -96861206 + L1MEc LINE L1 1535 1853 -861 * 6385 127 17 25 chr5 102768964 102769979 -96860171 + L1P LINE L1 11 1017 -5129 7542 54 3 10 chr5 102769979 102771041 -96859109 + L1PA5 LINE L1 5099 6154 0 462 243 232 33 chr5 102771149 102771598 -96858552 + L1MEc LINE L1 2187 2724 -3491 266 343 12 23 chr5 102771624 102771796 -96858354 + L1ME LINE L1 1540 1709 -4687 21 0 0 0 chr5 102772040 102772061 -96858089 + AT_rich Low_complexity Low_complexity 1 21 0 323 304 59 33 chr5 102772232 102772502 -96857648 + L1ME LINE L1 2288 2564 -3651 22 0 0 0 chr5 102773498 102773520 -96856630 + AT_rich Low_complexity Low_complexity 1 22 0 303 336 37 0 chr5 102773650 102773757 -96856393 + L2 LINE L2 3155 3265 -7 25395 160 12 25 chr5 102773836 102779177 -96850973 + L1PA10 LINE L1 10 5411 -1072 2256 114 3 0 chr5 102779177 102779474 -96850676 + AluSx SINE Alu 5 302 -10 25395 160 12 25 chr5 102779474 102780524 -96849626 + L1PA10 LINE L1 5411 6472 -11 255 31 0 0 chr5 102780526 102780558 -96849592 + (CAGG)n Simple_repeat Simple_repeat 2 33 0 247 328 217 11 chr5 102780598 102780778 -96849372 + MLT1K LTR MaLR 12 228 -360 293 328 48 32 chr5 102781260 102781385 -96848765 + L2 LINE L2 3121 3247 -25 315 305 108 6 chr5 102781451 102781618 -96848532 + MIR SINE MIR 76 259 -3 1574 135 88 117 chr5 102782125 102782196 -96847954 - THE1C LTR MaLR 0 375 304 1849 153 25 0 chr5 102782196 102782477 -96847673 + AluSx SINE Alu 1 288 -24 1574 135 88 117 chr5 102782477 102782791 -96847359 - THE1C LTR MaLR -71 304 1 23 54 0 0 chr5 102783287 102783324 -96846826 + AT_rich Low_complexity Low_complexity 1 37 0 2053 116 0 44 chr5 102783641 102783959 -96846191 - AluSx SINE Alu -8 304 1 1549 159 159 85 chr5 102784101 102784536 -96845614 - MLT1C LTR MaLR 0 467 1 798 189 0 8 chr5 102784548 102784680 -96845470 - FLAM_C SINE Alu -2 131 1 1067 171 0 0 chr5 102785458 102785633 -96844517 + FRAM SINE Alu 1 175 -1 477 206 29 20 chr5 102785936 102786038 -96844112 - FLAM_A SINE Alu -23 119 17 12772 125 14 37 chr5 102786177 102788314 -96841836 + HERVH LTR ERV1 906 2992 -4721 2844 152 2 0 chr5 102788300 102788747 -96841403 + HERVH LTR ERV1 3140 3587 -4126 * 365 61 0 0 chr5 102788752 102788801 -96841349 + HERVH LTR ERV1 3841 3889 -3824 3083 156 33 44 chr5 102788976 102789636 -96840514 - HERVH LTR ERV1 -7059 654 2 1509 166 114 68 chr5 102789641 102790069 -96840081 - LTR7 LTR ERV1 -2 448 1 1972 164 38 25 chr5 102790069 102790407 -96839743 - MSTA-int LTR MaLR -1280 371 26 2119 140 0 7 chr5 102790407 102790714 -96839436 - AluSx SINE Alu -7 305 1 1972 164 38 25 chr5 102790714 102790741 -96839409 - MSTA-int LTR MaLR -1625 26 1 2100 157 96 15 chr5 102790743 102791137 -96839013 - MSTA LTR MaLR -2 426 1 287 289 92 38 chr5 102791145 102791384 -96838766 + L1ME4a LINE L1 5676 5927 -194 932 210 72 14 chr5 102791605 102791881 -96838269 + L1MC4a LINE L1 6986 7277 -531 316 305 35 23 chr5 102792074 102792248 -96837902 - L2 LINE L2 -34 3279 3104 2088 211 113 105 chr5 102792369 102793287 -96836863 + L1ME1 LINE L1 5151 6055 -111 2042 118 31 3 chr5 102793287 102793574 -96836576 - AluSx SINE Alu -17 295 1 2088 211 113 105 chr5 102793574 102793672 -96836478 + L1ME1 LINE L1 6055 6151 -15 429 316 97 4 chr5 102793689 102793936 -96836214 - L2 LINE L2 -1357 1957 1688 709 269 65 40 chr5 102793940 102794312 -96835838 + L1ME LINE L1 4414 4794 -1352 1557 288 95 43 chr5 102794317 102794910 -96835240 + ERVL LTR ERVL 1821 2450 -3204 2309 100 0 0 chr5 102794910 102795211 -96834939 - AluSx SINE Alu -11 301 1 1557 288 95 43 chr5 102795211 102795441 -96834709 + ERVL LTR ERVL 2450 2667 -2987 2794 308 106 70 chr5 102795489 102797114 -96833036 + ERVL LTR ERVL 2826 4509 -1255 4036 200 37 20 chr5 102797116 102797420 -96832730 + Charlie1a DNA MER1_type 2 299 -2462 789 206 0 0 chr5 102797420 102797546 -96832604 - FLAM_A SINE Alu -7 126 1 4036 200 37 20 chr5 102797546 102798134 -96832016 + Charlie1a DNA MER1_type 299 909 -546 216 0 0 0 chr5 102798387 102798411 -96831739 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2141 88 11 0 chr5 102798418 102798691 -96831459 - AluSq SINE Alu -35 278 3 762 104 130 0 chr5 102799232 102799347 -96830803 + THE1B LTR MaLR 1 130 -234 1341 113 39 30 chr5 102799468 102799699 -96830451 + THE1B LTR MaLR 132 364 0 2233 107 3 0 chr5 102799750 102800041 -96830109 + AluSx SINE Alu 1 292 -20 410 270 13 69 chr5 102800075 102800234 -96829916 + L1ME LINE L1 5515 5664 -457 1345 183 42 0 chr5 102800242 102800482 -96829668 - MSTB LTR MaLR 0 426 177 1028 159 59 0 chr5 102800482 102800652 -96829498 + AluSc SINE Alu 121 300 -9 650 204 130 0 chr5 102800656 102800818 -96829332 - MSTB LTR MaLR -245 183 1 6115 183 50 31 chr5 102800823 102802078 -96828072 - MSTB-int LTR MaLR -6 1645 366 1494 165 111 67 chr5 102802078 102802509 -96827641 - LTR7 LTR ERV1 0 450 1 3652 113 5 26 chr5 102802513 102803078 -96827072 - HERVH LTR ERV1 -4 7709 7157 1524 173 31 3 chr5 102803048 102803337 -96826813 - HERVH LTR ERV1 -1670 6043 5747 * 6549 102 15 4 chr5 102803337 102804272 -96825878 - HERVH LTR ERV1 -2297 4232 3962 823 140 15 0 chr5 102804308 102804444 -96825706 - HERVH LTR ERV1 -3720 3993 3856 201 74 0 0 chr5 102805387 102805414 -96824736 + (CCG)n Simple_repeat Simple_repeat 3 29 0 219 222 0 19 chr5 102805491 102805545 -96824605 + (CCG)n Simple_repeat Simple_repeat 2 54 0 823 167 7 0 chr5 102806662 102806800 -96823350 - FLAM_C SINE Alu -2 141 3 2296 114 0 3 chr5 102808828 102809135 -96821015 - AluSx SINE Alu -6 306 1 423 214 37 4 chr5 102809199 102809295 -96820855 - MER2 DNA MER2_type -139 100 4 200 352 93 67 chr5 102809900 102810244 -96819906 - L2 LINE L2 -4 3268 2916 2058 109 30 20 chr5 102810822 102811124 -96819026 + AluY SINE Alu 1 305 -6 376 253 133 25 chr5 102811739 102811897 -96818253 - MER5B DNA MER1_type -3 175 1 719 214 9 86 chr5 102812005 102812225 -96817925 + MER20 DNA MER1_type 17 219 0 1422 236 98 11 chr5 102812481 102813042 -96817108 + L1ME3 LINE L1 5534 6155 -7 795 75 28 0 chr5 102813231 102813338 -96816812 - HY1 scRNA scRNA -1 111 2 228 333 0 0 chr5 102813344 102813404 -96816746 + MIR SINE MIR 47 106 -156 1499 120 113 55 chr5 102813831 102814122 -96816028 - MER46B DNA MER2_type 0 236 54 477 185 0 43 chr5 102814123 102814215 -96815935 + FLAM_A SINE Alu 47 134 -8 239 140 160 0 chr5 102814215 102814265 -96815885 - MER46B DNA MER2_type -303 58 1 246 272 320 0 chr5 102814265 102814368 -96815782 - MIR SINE MIR -108 154 19 274 180 16 16 chr5 102814512 102814573 -96815577 + MLT1K LTR MaLR 522 582 -6 423 330 105 67 chr5 102815828 102815989 -96814161 - L2 LINE L2 -14 3299 3146 603 220 0 53 chr5 102815989 102816121 -96814029 + FLAM_A SINE Alu 1 125 -8 423 330 105 67 chr5 102816121 102816405 -96813745 - L2 LINE L2 -167 3146 2837 29 0 0 0 chr5 102816417 102816446 -96813704 + AT_rich Low_complexity Low_complexity 1 29 0 676 313 90 46 chr5 102817063 102817618 -96812532 + L2 LINE L2 2625 3210 -103 309 322 79 42 chr5 102817998 102818318 -96811832 + MLT1L LTR MaLR 121 443 -172 654 165 66 8 chr5 102818451 102818572 -96811578 - FLAM_A SINE Alu -5 128 1 376 252 41 87 chr5 102818647 102818865 -96811285 + HAL1 LINE L1 2266 2473 -34 324 304 133 25 chr5 102819588 102819746 -96810404 + MER91A DNA MER1_type 19 193 -3 263 276 63 24 chr5 102819881 102820008 -96810142 - MER94 DNA DNA 0 134 3 1129 201 119 29 chr5 102820700 102821043 -96809107 - MLT1A2 LTR MaLR 0 374 1 21 0 0 0 chr5 102821092 102821113 -96809037 + AT_rich Low_complexity Low_complexity 1 21 0 918 289 95 19 chr5 102821162 102821532 -96808618 - HERV16 LTR ERVL -2472 2524 2127 * 1855 297 47 27 chr5 102821529 102821707 -96808443 - HERV16 LTR ERVL -2787 2209 2036 511 84 0 36 chr5 102821707 102821790 -96808360 - MADE1 DNA Mariner 0 80 1 1855 297 47 27 chr5 102821790 102822888 -96807262 - HERV16 LTR ERVL -2960 2036 843 2446 71 0 0 chr5 102823486 102823783 -96806367 - AluY SINE Alu -14 297 1 2694 208 108 77 chr5 102823916 102824752 -96805398 + MER21B LTR ERV1 1 862 -1 974 163 42 0 chr5 102824762 102824928 -96805222 - MLT1A1 LTR MaLR -15 350 178 1777 92 0 0 chr5 102824930 102825157 -96804993 - AluSq SINE Alu -14 299 73 * 2579 56 0 3 chr5 102825155 102825461 -96804689 - AluY SINE Alu -6 305 1 1919 116 3 3 chr5 102825462 102825755 -96804395 + L1PB1 LINE L1 5859 6151 0 1544 176 9 56 chr5 102825796 102826115 -96804035 - AluJo SINE Alu -4 308 5 2178 113 0 3 chr5 102826196 102826489 -96803661 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr5 102826629 102826651 -96803499 + AT_rich Low_complexity Low_complexity 1 22 0 382 179 43 51 chr5 102827049 102827166 -96802984 + MER112 DNA MER1_type 141 256 -4 521 236 257 0 chr5 102827173 102827313 -96802837 + MER5A DNA MER1_type 14 189 0 363 274 43 102 chr5 102827372 102827558 -96802592 + MIR SINE MIR 88 262 0 25 31 0 0 chr5 102827810 102827842 -96802308 + AT_rich Low_complexity Low_complexity 1 32 0 640 226 42 42 chr5 102828070 102828260 -96801890 + L1MB8 LINE L1 5983 6172 -6 232 291 47 55 chr5 102828353 102828480 -96801670 + L2 LINE L2 3120 3245 -68 213 323 118 0 chr5 102828557 102828650 -96801500 + MIR SINE MIR 153 256 -6 585 165 39 0 chr5 102830825 102830928 -96799222 + U6 snRNA snRNA 1 107 0 1368 138 47 44 chr5 102830928 102831283 -96798867 + L1PA16 LINE L1 5781 6166 0 706 216 107 91 chr5 102831814 102832184 -96797966 + L1MC5 LINE L1 7311 7673 -288 1762 161 0 11 chr5 102832184 102832469 -96797681 - AluJb SINE Alu -28 284 3 706 216 107 91 chr5 102832469 102832623 -96797527 + L1MC5 LINE L1 7673 7849 -112 1946 167 0 0 chr5 102832623 102832935 -96797215 + AluSx SINE Alu 1 312 0 706 216 107 91 chr5 102832935 102833017 -96797133 + L1MC5 LINE L1 7849 7928 -33 228 247 55 14 chr5 102834127 102834200 -96795950 + MIR SINE MIR 85 160 -102 22 35 0 0 chr5 102834776 102834805 -96795345 + AT_rich Low_complexity Low_complexity 1 29 0 303 295 98 72 chr5 102835144 102835337 -96794813 + MIR SINE MIR 48 245 -17 564 238 157 27 chr5 102835412 102835597 -96794553 - MER58C DNA MER1_type -3 212 4 2250 105 3 0 chr5 102835921 102836215 -96793935 - AluSp SINE Alu -18 295 1 473 236 132 11 chr5 102836375 102836557 -96793593 + L1MC5 LINE L1 7723 7926 -35 2003 123 25 3 chr5 102836569 102836853 -96793297 + AluSx SINE Alu 6 295 -17 986 158 23 12 chr5 102837019 102837190 -96792960 + AluJb SINE Alu 1 173 -139 429 153 0 0 chr5 102837190 102837262 -96792888 + AluS SINE Alu 223 294 -17 495 273 5 66 chr5 102838110 102838308 -96791842 + L2 LINE L2 3124 3309 -4 194 302 19 0 chr5 102838387 102838440 -96791710 - MIR3 SINE MIR -3 205 152 21 36 0 0 chr5 102839720 102839748 -96790402 + AT_rich Low_complexity Low_complexity 1 28 0 192 219 49 0 chr5 102841015 102841138 -96789012 + (TA)n Simple_repeat Simple_repeat 2 130 0 643 279 92 39 chr5 102841665 102842371 -96787779 + L1MC4 LINE L1 7120 7853 -189 821 192 40 23 chr5 102842692 102842869 -96787281 + MER5A DNA MER1_type 1 180 -9 6420 87 25 0 chr5 102843473 102844795 -96785355 - L1PA8 LINE L1 0 6172 4826 1202 83 12 6 chr5 102844797 102844966 -96785184 - L1PA8 LINE L1 -1458 4688 4519 651 144 0 10 chr5 102844967 102845071 -96785079 + FLAM_C SINE Alu 25 127 -16 196 337 23 0 chr5 102845270 102845356 -96784794 + MIR SINE MIR 146 233 -29 617 311 18 18 chr5 102845393 102845612 -96784538 - MIR SINE MIR -22 240 22 333 0 0 0 chr5 102845648 102845685 -96784465 + (TTA)n Simple_repeat Simple_repeat 3 39 0 38 22 0 0 chr5 102845732 102845777 -96784373 + AT_rich Low_complexity Low_complexity 1 45 0 452 126 11 23 chr5 102846109 102846196 -96783954 + MER53 DNA DNA 95 180 -9 884 145 50 50 chr5 102847917 102848138 -96782012 - L1MA7 LINE L1 -2 6289 6069 885 237 86 67 chr5 102848518 102848948 -96781202 + HAL1 LINE L1 98 535 -1972 * 1539 262 182 26 chr5 102848940 102849823 -96780327 + HAL1 LINE L1 1486 2506 -1 3293 173 5 0 chr5 102849960 102850538 -96779612 - L1PA16 LINE L1 -1 6165 5585 640 219 17 0 chr5 102850579 102850698 -96779452 + FLAM_A SINE Alu 1 121 -12 331 351 21 0 chr5 102850830 102850924 -96779226 + L2 LINE L2 3139 3234 -38 306 180 33 0 chr5 102851134 102851195 -96778955 + L1MA4A LINE L1 5898 5960 -343 313 125 0 0 chr5 102851224 102851272 -96778878 + FLAM SINE Alu 64 111 -22 462 216 9 27 chr5 102851276 102851387 -96778763 - L1PA12 LINE L1 -6823 758 650 29 0 0 0 chr5 102851463 102851492 -96778658 + AT_rich Low_complexity Low_complexity 1 29 0 8291 209 27 13 chr5 102851522 102853435 -96776715 + L1P LINE L1 931 2870 -3276 5511 122 1 48 chr5 102853413 102854367 -96775783 + L1PA11 LINE L1 5265 6173 -1 * 3693 174 17 10 chr5 102854358 102855136 -96775014 + L1MA9 LINE L1 5193 5978 -334 * 1231 126 38 17 chr5 102855153 102855391 -96774759 + L1MA9 LINE L1 6070 6312 0 2518 130 48 22 chr5 102855453 102855907 -96774243 - L1MA4 LINE L1 -7 6293 5828 894 239 65 47 chr5 102856444 102856783 -96773367 - L1ME3A LINE L1 -5 6165 5821 440 319 25 4 chr5 102856780 102857021 -96773129 - L1MDb LINE L1 -3179 3203 2958 * 531 95 253 0 chr5 102857032 102857127 -96773023 - AluY SINE Alu -16 295 177 575 282 86 11 chr5 102857128 102857592 -96772558 - L1MDb LINE L1 -3429 2953 2455 42285 37 22 3 chr5 102857601 102863637 -96766513 + L1PA3 LINE L1 1 6155 0 286 264 9 28 chr5 102863640 102863746 -96766404 - L1MDb LINE L1 -3913 2469 2366 476 279 98 64 chr5 102863769 102864127 -96766023 - L1MDb LINE L1 -4132 2431 2062 27 29 0 0 chr5 102864130 102864164 -96765986 + AT_rich Low_complexity Low_complexity 1 34 0 289 284 160 21 chr5 102864214 102864373 -96765777 - L1MDb LINE L1 -4634 1929 1737 189 0 0 0 chr5 102864373 102864394 -96765756 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 289 284 160 21 chr5 102864394 102864428 -96765722 - L1MDb LINE L1 -4826 1737 1709 257 300 90 26 chr5 102864431 102864945 -96765205 - L1MDb LINE L1 -4852 1532 1031 24 32 0 0 chr5 102865613 102865644 -96764506 + AT_rich Low_complexity Low_complexity 1 31 0 1850 112 63 4 chr5 102865841 102866110 -96764040 - AluSp SINE Alu -25 288 4 199 331 118 24 chr5 102866839 102866966 -96763184 + L3 LINE CR1 1435 1573 -4 786 221 25 72 chr5 102867100 102867335 -96762815 - MER58A DNA MER1_type 0 224 1 1100 291 108 28 chr5 102867571 102868073 -96762077 + MER77 LTR ERV1 58 599 -6 768 328 81 33 chr5 102868484 102869002 -96761148 + L3 LINE CR1 934 1476 -101 293 330 20 0 chr5 102869013 102869113 -96761037 - L2 LINE L2 0 3313 3212 681 318 100 55 chr5 102869254 102869880 -96760270 + L2 LINE L2 2653 3313 0 197 250 125 0 chr5 102869880 102869936 -96760214 + L3 LINE CR1 1496 1558 -19 326 133 133 13 chr5 102870253 102870328 -96759822 - Charlie5 DNA MER1_type -27 2585 2502 369 207 0 0 chr5 102870421 102870503 -96759647 + (TA)n Simple_repeat Simple_repeat 1 82 0 526 132 16 47 chr5 102870550 102870679 -96759471 - Charlie5 DNA MER1_type -55 2557 2433 * 747 170 14 7 chr5 102870677 102870824 -96759326 - Charlie5 DNA MER1_type -2447 165 18 2386 116 8 8 chr5 102871101 102871456 -96758694 - THE1A LTR MaLR 0 355 1 221 154 0 0 chr5 102871703 102871744 -96758406 + (CATA)n Simple_repeat Simple_repeat 1 41 0 1872 174 3 0 chr5 102871951 102872255 -96757895 + AluJb SINE Alu 1 305 -7 21 0 0 0 chr5 102872306 102872327 -96757823 + AT_rich Low_complexity Low_complexity 1 21 0 339 195 288 8 chr5 102872342 102872460 -96757690 - MIR SINE MIR 0 262 112 1379 222 5 64 chr5 102872573 102872961 -96757189 + MLT1A1 LTR MaLR 1 365 0 228 306 88 5 chr5 102874763 102874897 -96755253 - MIR SINE MIR -62 146 3 202 316 43 43 chr5 102875105 102875244 -96754906 - L3 LINE CR1 -1111 466 328 21 82 0 0 chr5 102876261 102876310 -96753840 + AT_rich Low_complexity Low_complexity 1 49 0 688 250 67 33 chr5 102877080 102877320 -96752830 - MIR SINE MIR -8 254 7 937 217 16 0 chr5 102877338 102877522 -96752628 - MER5A DNA MER1_type 0 189 3 331 350 0 17 chr5 102878939 102879056 -96751094 - MIR3 SINE MIR -93 115 1 270 0 0 0 chr5 102879810 102879840 -96750310 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 2363 95 0 3 chr5 102879928 102880234 -96749916 - AluSg SINE Alu -5 305 1 252 0 0 0 chr5 102881485 102881513 -96748637 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 2204 63 3 0 chr5 102882734 102883019 -96747131 - L1PA7 LINE L1 0 6154 5869 4590 71 23 6 chr5 102883019 102883844 -96746306 + L1PA7 LINE L1 5059 5892 -262 322 260 171 25 chr5 102885798 102886079 -96744071 - L1ME4a LINE L1 -260 5861 5540 24 53 0 0 chr5 102886179 102886217 -96743933 + AT_rich Low_complexity Low_complexity 1 38 0 207 0 0 0 chr5 102888792 102888815 -96741335 + (A)n Simple_repeat Simple_repeat 1 23 0 2374 178 60 2 chr5 102889569 102890048 -96740102 - L1PB4 LINE L1 0 6156 5650 635 206 20 20 chr5 102891073 102891219 -96738931 - L1PA16 LINE L1 -93 6073 5928 244 310 105 7 chr5 102891300 102891404 -96738746 - MIR SINE MIR -68 140 37 263 246 92 0 chr5 102891500 102891565 -96738585 - L2 LINE L2 -2 3270 3200 184 275 55 46 chr5 102892365 102892474 -96737676 + MIR SINE MIR 124 233 -29 682 213 0 0 chr5 102893187 102893309 -96736841 + FLAM_A SINE Alu 1 122 -11 21 0 0 0 chr5 102893311 102893332 -96736818 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 102893701 102893724 -96736426 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 102895234 102895258 -96734892 + AT_rich Low_complexity Low_complexity 1 24 0 214 267 100 0 chr5 102895258 102895310 -96734840 - L2 LINE L2 -12 3260 3203 246 298 94 24 chr5 102895310 102895486 -96734664 + MER5B DNA MER1_type 1 184 -5 564 183 9 17 chr5 102895714 102895829 -96734321 + MLT1I LTR MaLR 293 406 -3 193 262 33 0 chr5 102895969 102896030 -96734120 - MIR SINE MIR -2 260 198 * 611 321 16 64 chr5 102896024 102896311 -96733839 - L2 LINE L2 -323 2990 2719 4807 198 43 19 chr5 102897239 102898294 -96731856 + Tigger6a DNA MER2_type 2 1081 -2 296 258 90 18 chr5 102898768 102898935 -96731215 + L1ME4a LINE L1 5931 6109 -12 446 286 84 0 chr5 102899507 102899661 -96730489 - MIR SINE MIR -14 248 82 277 261 0 15 chr5 102900625 102900690 -96729460 - MIR SINE MIR 0 262 199 2248 154 8 6 chr5 102901089 102901452 -96728698 + THE1B LTR MaLR 1 364 0 7371 38 1 1 chr5 102901461 102902931 -96727219 + L1PA4 LINE L1 4684 6154 -1 414 275 147 44 chr5 102903108 102903381 -96726769 + L1ME4a LINE L1 5818 6118 -3 464 265 116 17 chr5 102903851 102904032 -96726118 + L1MB8 LINE L1 5980 6178 0 794 207 53 6 chr5 102904148 102904317 -96725833 - MER45A DNA AcHobo -1 177 1 979 283 79 50 chr5 102904996 102905639 -96724511 - L1M4 LINE L1 -936 5210 4549 * 7152 43 1 0 chr5 102905637 102906501 -96723649 + L1PA5 LINE L1 5288 6152 -2 601 249 28 17 chr5 102906615 102906796 -96723354 - L1M4 LINE L1 -1894 4252 4070 386 196 29 0 chr5 102906823 102906906 -96723244 - L1ME LINE L1 -568 5602 5518 431 331 29 17 chr5 102908202 102908377 -96721773 + MIR3 SINE MIR 19 195 -13 498 299 82 26 chr5 102908825 102909019 -96721131 - L2 LINE L2 -1 3312 3108 193 266 310 6 chr5 102909093 102909251 -96720899 - L2 LINE L2 -339 2975 2770 2534 153 19 16 chr5 102909336 102909761 -96720389 + MSTB LTR MaLR 1 426 0 638 292 83 51 chr5 102910488 102910710 -96719440 + L1MC4 LINE L1 7140 7354 -688 2435 116 25 0 chr5 102910710 102911064 -96719086 + THE1B LTR MaLR 2 364 0 10359 106 47 7 chr5 102911064 102912583 -96717567 + THE1B-int LTR MaLR 1 1580 0 2168 148 34 0 chr5 102912583 102912935 -96717215 + THE1B LTR MaLR 1 364 0 638 292 83 51 chr5 102912935 102913121 -96717029 + L1MC4 LINE L1 7353 7563 -479 3249 160 28 15 chr5 102913130 102914122 -96716028 + L1PB4 LINE L1 4788 5791 -365 319 224 10 10 chr5 102914122 102914220 -96715930 + (TA)n Simple_repeat Simple_repeat 1 98 0 207 69 0 0 chr5 102914249 102914278 -96715872 + (CA)n Simple_repeat Simple_repeat 2 30 0 46 19 0 0 chr5 102914291 102914344 -96715806 + AT_rich Low_complexity Low_complexity 1 53 0 2238 134 14 0 chr5 102914404 102914761 -96715389 + L1PB4 LINE L1 5792 6153 -3 871 239 35 75 chr5 102914830 102915168 -96714982 + L1MC4 LINE L1 7608 7925 -117 182 37 37 0 chr5 102915168 102915195 -96714955 + (TAGA)n Simple_repeat Simple_repeat 4 31 0 871 239 35 75 chr5 102915195 102915307 -96714843 + L1MC4 LINE L1 7925 8040 -2 1765 189 0 13 chr5 102917314 102917615 -96712535 + AluJo SINE Alu 1 297 -15 313 307 139 0 chr5 102917906 102918043 -96712107 - MIR SINE MIR 0 262 107 194 267 0 0 chr5 102918650 102918695 -96711455 + L2 LINE L2 3267 3311 -2 294 282 0 0 chr5 102918925 102918996 -96711154 - MIR SINE MIR -8 254 184 396 348 38 27 chr5 102919221 102919405 -96710745 - MIR SINE MIR -54 208 23 2128 72 4 0 chr5 102920177 102920453 -96709697 + L1PA8 LINE L1 5887 6163 -9 24 0 0 0 chr5 102920453 102920477 -96709673 + AT_rich Low_complexity Low_complexity 1 24 0 181 327 0 0 chr5 102921346 102921398 -96708752 - L2 LINE L2 -8 3264 3213 2142 100 30 7 chr5 102922203 102922504 -96707646 + AluSq SINE Alu 1 308 -5 180 0 0 0 chr5 102922867 102922887 -96707263 + (A)n Simple_repeat Simple_repeat 1 20 0 479 253 142 11 chr5 102923193 102923383 -96706767 - MIR SINE MIR 0 262 48 666 301 49 53 chr5 102923384 102923816 -96706334 - MLT1K LTR MaLR 0 588 159 22 0 0 0 chr5 102926461 102926483 -96703667 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr5 102927358 102927385 -96702765 + AT_rich Low_complexity Low_complexity 1 27 0 1117 181 5 5 chr5 102927386 102927596 -96702554 - L1MB2 LINE L1 -3 6168 5959 1442 167 32 16 chr5 102927596 102927900 -96702250 - L1MA4 LINE L1 -2 6298 5982 191 0 103 0 chr5 102927943 102927972 -96702178 + A-rich Low_complexity Low_complexity 2 33 0 413 332 75 70 chr5 102928047 102928141 -96702009 - L2 LINE L2 -1 3312 3220 2429 72 7 3 chr5 102928141 102928447 -96701703 + AluY SINE Alu 1 307 -4 413 332 75 70 chr5 102928447 102928925 -96701225 - L2 LINE L2 -93 3220 2727 2010 116 10 7 chr5 102929155 102929458 -96700692 - AluSx SINE Alu -8 304 1 435 276 89 8 chr5 102929581 102929704 -96700446 + L2 LINE L2 3122 3254 -18 2056 132 32 106 chr5 102930086 102930579 -96699571 + L1MA6 LINE L1 5844 6300 0 256 98 39 20 chr5 102932135 102932186 -96697964 - L1MC4 LINE L1 -2 8040 7989 1116 290 60 16 chr5 102932196 102932631 -96697519 - L1MC4 LINE L1 -143 7899 7446 2008 236 84 24 chr5 102932633 102933312 -96696838 - L1MC4 LINE L1 -720 7322 6444 205 188 31 31 chr5 102935344 102935408 -96694742 + (TATG)n Simple_repeat Simple_repeat 3 66 0 1835 149 33 3 chr5 102936029 102936330 -96693820 + AluSx SINE Alu 1 310 -2 258 331 89 12 chr5 102936838 102937007 -96693143 + LTR16C LTR ERVL 308 489 -2 557 293 12 59 chr5 102937036 102937289 -96692861 + L1M4 LINE L1 2929 3169 -2977 1609 199 0 19 chr5 102937289 102937401 -96692749 + AluJo SINE Alu 1 114 -198 1733 121 127 27 chr5 102937401 102937732 -96692418 - THE1B LTR MaLR 0 364 1 1609 199 0 19 chr5 102937732 102937931 -96692219 + AluJo SINE Alu 114 306 -6 8102 154 32 21 chr5 102937936 102938659 -96691491 + L1MA5 LINE L1 3787 4501 -1799 1951 120 102 0 chr5 102938659 102938942 -96691208 + AluSx SINE Alu 1 312 0 8102 154 32 21 chr5 102938942 102940705 -96689445 + L1MA5 LINE L1 4501 6300 0 1108 234 70 55 chr5 102940722 102941107 -96689043 + L1ME1 LINE L1 5718 6108 -58 325 295 33 0 chr5 102941178 102941300 -96688850 + MIR SINE MIR 136 261 -1 21 0 0 0 chr5 102941577 102941598 -96688552 + AT_rich Low_complexity Low_complexity 1 21 0 268 231 45 128 chr5 102943750 102943906 -96686244 + MIR SINE MIR 119 261 -1 665 123 19 0 chr5 102944149 102944255 -96685895 + AluY SINE Alu 191 298 -13 306 293 134 55 chr5 102944333 102944497 -96685653 + L2 LINE L2 3096 3272 0 24 53 0 0 chr5 102944566 102944604 -96685546 + AT_rich Low_complexity Low_complexity 1 38 0 202 150 0 25 chr5 102947271 102947311 -96682839 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 541 97 0 0 chr5 102947393 102947504 -96682646 + AluY SINE Alu 211 321 0 1072 151 0 0 chr5 102949981 102950167 -96679983 + MER53 DNA DNA 4 189 0 904 233 0 28 chr5 102951204 102951419 -96678731 - MER3 DNA MER1_type 0 209 1 549 278 30 0 chr5 102951697 102951830 -96678320 + MIR SINE MIR 28 164 -98 319 229 16 0 chr5 102951854 102951915 -96678235 - MER91B DNA MER1_type -127 63 2 291 250 12 12 chr5 102951927 102952011 -96678139 + MIR SINE MIR 175 258 -4 236 315 55 0 chr5 102952087 102952160 -96677990 + MER81 DNA DNA 4 80 -34 270 136 0 0 chr5 102952527 102952571 -96677579 + (T)n Simple_repeat Simple_repeat 1 44 0 1335 203 74 30 chr5 102953199 102953377 -96676773 - AluJo SINE Alu -3 309 111 270 0 0 0 chr5 102953377 102953407 -96676743 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1335 203 74 30 chr5 102953407 102953524 -96676626 - AluJo SINE Alu -201 111 1 200 333 131 0 chr5 102954508 102954607 -96675543 + MIR SINE MIR 37 148 -60 258 295 0 0 chr5 102955579 102955640 -96674510 - L2 LINE L2 -1 3271 3211 1378 247 133 18 chr5 102955834 102955956 -96674194 + L1MC4a LINE L1 6443 6550 -1258 473 47 16 0 chr5 102955956 102956020 -96674130 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 1378 247 133 18 chr5 102956020 102956444 -96673706 + L1MC4a LINE L1 6550 7052 -756 2408 205 83 18 chr5 102957095 102957748 -96672402 + L1MC4 LINE L1 7143 7837 -205 831 48 0 0 chr5 102960400 102960503 -96669647 + L1PA4 LINE L1 6042 6144 -11 21 0 0 0 chr5 102960503 102960524 -96669626 + AT_rich Low_complexity Low_complexity 1 21 0 228 222 0 0 chr5 102960917 102960989 -96669161 + (CA)n Simple_repeat Simple_repeat 1 72 0 1952 135 14 3 chr5 102961282 102961579 -96668571 + AluSx SINE Alu 3 302 -10 388 348 219 21 chr5 102962094 102962468 -96667682 - L2 LINE L2 0 3272 2825 1470 181 0 76 chr5 102962875 102963190 -96666960 + AluJo SINE Alu 13 303 -9 340 238 123 25 chr5 102963892 102964014 -96666136 + MIR SINE MIR 36 169 -93 976 379 37 29 chr5 102964330 102965248 -96664902 + ERVL LTR ERVL 4335 5259 -505 592 39 13 0 chr5 102965261 102965338 -96664812 - MLT1A2 LTR MaLR -15 413 336 689 225 97 66 chr5 102965460 102965749 -96664401 - MLT1A2 LTR MaLR -76 298 1 272 298 39 44 chr5 102966334 102966515 -96663635 + LTR16C LTR ERVL 289 468 -23 189 0 0 0 chr5 102968470 102968491 -96661659 + (A)n Simple_repeat Simple_repeat 1 21 0 985 283 24 0 chr5 102969139 102969386 -96660764 + MIR SINE MIR 10 262 0 1819 63 30 0 chr5 102969679 102969916 -96660234 - L1PA5 LINE L1 0 6154 5911 555 54 0 14 chr5 102969850 102969924 -96660226 - L1PA5 LINE L1 -178 5976 5904 253 299 55 8 chr5 102969943 102970070 -96660080 - L1ME LINE L1 -472 5649 5517 1610 203 14 0 chr5 102970741 102971037 -96659113 + AluJo SINE Alu 1 300 -12 412 246 266 44 chr5 102971158 102971406 -96658744 - L2 LINE L2 0 3313 3011 7401 236 69 53 chr5 102971413 102971576 -96658574 + L1MA2 LINE L1 6 165 -7400 2551 61 0 0 chr5 102971576 102971886 -96658264 - AluY SINE Alu -1 310 1 7401 236 69 53 chr5 102971886 102971951 -96658199 + L1MA2 LINE L1 165 228 -7337 2335 91 0 7 chr5 102971951 102972248 -96657902 - AluSq SINE Alu -16 297 3 7401 236 69 53 chr5 102972248 102973669 -96656481 + L1MA2 LINE L1 228 988 -6577 1827 131 6 56 chr5 102973669 102973989 -96656161 + AluSg SINE Alu 1 304 -6 7401 236 69 53 chr5 102973989 102975124 -96655026 + L1MA2 LINE L1 988 2104 -5461 2198 266 39 19 chr5 102975124 102976083 -96654067 + L1P3 LINE L1 5 1048 -4827 5447 123 10 11 chr5 102976090 102977230 -96652920 + L1P4 LINE L1 4465 5604 -564 * 5496 180 47 15 chr5 102977223 102979216 -96650934 + L1MA2 LINE L1 2868 4925 -2640 25645 139 10 28 chr5 102979216 102985725 -96644425 + L1PA8A LINE L1 3 6446 0 8961 168 16 18 chr5 102985720 102988357 -96641793 + L1MA2 LINE L1 4914 7538 -185 * 337 150 0 80 chr5 102988481 102988581 -96641569 + L1MA2 LINE L1 6066 6157 -147 1589 82 51 0 chr5 102988581 102988831 -96641319 + L1MA2 LINE L1 6035 6303 -1 240 191 0 0 chr5 102989185 102989227 -96640923 - L2 LINE L2 -4 3309 3268 263 343 0 0 chr5 102989423 102989525 -96640625 + LTR48B LTR ERV1 1 102 -542 * 880 227 47 114 chr5 102989503 102989975 -96640175 + MER39 LTR ERV1 265 704 -3 23 0 0 0 chr5 102992581 102992604 -96637546 + AT_rich Low_complexity Low_complexity 1 23 0 21023 102 6 45 chr5 102992841 102996279 -96633871 + L1PA7 LINE L1 2098 5401 -745 2758 34 0 0 chr5 102996279 102996602 -96633548 + L1PA5 LINE L1 5828 6154 0 6040 65 0 0 chr5 102996605 102997374 -96632776 + L1PA7 LINE L1 5385 6153 -1 568 160 27 96 chr5 102997758 102997885 -96632265 + L1M2 LINE L1 2864 2975 -3171 606 180 57 0 chr5 102997885 102997975 -96632175 + L1MA3 LINE L1 6175 6275 -30 503 42 0 14 chr5 102997975 102998046 -96632104 + (TA)n Simple_repeat Simple_repeat 2 71 0 606 180 57 0 chr5 102998046 102998077 -96632073 + L1MA3 LINE L1 6275 6303 -2 568 160 27 96 chr5 102998077 102998137 -96632013 + L1M2 LINE L1 2975 3038 -3108 1673 144 0 15 chr5 102998138 102998401 -96631749 + AluSp SINE Alu 1 259 -54 347 65 39 52 chr5 102998429 102998506 -96631644 + (GGAA)n Simple_repeat Simple_repeat 3 78 0 5857 196 51 29 chr5 102998506 103000027 -96630123 + L1M2 LINE L1 3031 4708 -1583 1412 208 63 0 chr5 103000027 103000311 -96629839 + AluJo SINE Alu 1 302 -10 5857 196 51 29 chr5 103000311 103001376 -96628774 + L1M2 LINE L1 4708 5748 -543 333 217 17 9 chr5 103001376 103001491 -96628659 + (TG)n Simple_repeat Simple_repeat 2 117 0 747 166 7 7 chr5 103001541 103001680 -96628470 - L1MB1 LINE L1 -274 5915 5777 19899 177 22 56 chr5 103001805 103005358 -96624792 - L1PA12 LINE L1 -193 7413 3305 2443 93 3 0 chr5 103005358 103005668 -96624482 - AluSp SINE Alu -2 311 1 19899 177 22 56 chr5 103005668 103007836 -96622314 - L1PA12 LINE L1 -4301 3305 1065 1857 218 54 33 chr5 103007838 103008358 -96621792 + MLT2A2 LTR ERVL 3 554 0 4722 153 27 22 chr5 103008358 103009141 -96621009 - L1PA12 LINE L1 -6788 793 7 2046 107 10 33 chr5 103011072 103011372 -96618778 - AluSc SINE Alu -11 298 6 1181 147 10 0 chr5 103011527 103011724 -96618426 + L1PBa LINE L1 1 199 -6664 * 10648 149 50 17 chr5 103011718 103015505 -96614645 + L1PBa LINE L1 626 4682 -2180 7034 54 3 10 chr5 103015513 103016444 -96613706 + L1PA5 LINE L1 5229 6154 0 444 225 225 38 chr5 103016552 103017005 -96613145 + L1M4 LINE L1 2118 2655 -3491 248 351 6 23 chr5 103017031 103017202 -96612948 + L1MEc LINE L1 1540 1707 -4689 21 0 0 0 chr5 103017447 103017468 -96612682 + AT_rich Low_complexity Low_complexity 1 21 0 290 282 47 24 chr5 103017639 103017909 -96612241 + L1MEc LINE L1 2288 2564 -3651 22 0 0 0 chr5 103018905 103018927 -96611223 + AT_rich Low_complexity Low_complexity 1 22 0 310 336 37 0 chr5 103019057 103019164 -96610986 + L2 LINE L2 3155 3265 -7 24265 157 10 21 chr5 103019243 103024590 -96605560 + L1PA10 LINE L1 10 5412 -1071 2256 114 3 0 chr5 103024590 103024887 -96605263 + AluSx SINE Alu 5 302 -10 24265 157 10 21 chr5 103024887 103025937 -96604213 + L1PA10 LINE L1 5412 6472 -11 255 31 0 0 chr5 103025939 103025971 -96604179 + (CAGG)n Simple_repeat Simple_repeat 2 33 0 296 330 214 6 chr5 103026011 103026193 -96603957 + MLT1K LTR MaLR 12 231 -357 293 328 48 32 chr5 103026687 103026812 -96603338 + L2 LINE L2 3121 3247 -25 315 305 108 6 chr5 103026878 103027045 -96603105 + MIR SINE MIR 76 259 -3 1556 137 88 117 chr5 103027552 103027623 -96602527 - THE1C LTR MaLR 0 375 304 1849 153 25 0 chr5 103027623 103027904 -96602246 + AluSx SINE Alu 1 288 -24 1556 137 88 117 chr5 103027904 103028218 -96601932 - THE1C LTR MaLR -71 304 1 409 333 82 0 chr5 103028965 103029172 -96600978 - L3 LINE CR1 -140 1437 1214 580 323 114 42 chr5 103029180 103029654 -96600496 - L2 LINE L2 -2 3311 2804 2949 78 92 5 chr5 103029685 103030097 -96600053 - LTR7 LTR ERV1 -2 448 1 184 388 19 25 chr5 103030219 103030379 -96599771 - L3 LINE CR1 -439 1138 980 606 230 108 7 chr5 103030467 103030615 -96599535 + MER5B DNA MER1_type 1 163 -15 527 290 155 0 chr5 103030647 103030802 -96599348 - MER5A DNA MER1_type -2 187 9 1049 132 35 96 chr5 103030823 103031020 -96599130 - MER5A DNA MER1_type -4 185 1 287 291 122 65 chr5 103033000 103033230 -96596920 + L3 LINE CR1 584 826 -751 2552 62 0 0 chr5 103033546 103033850 -96596300 + AluY SINE Alu 1 304 -7 291 283 52 99 chr5 103033927 103033980 -96596170 + MIR SINE MIR 3 57 -205 2424 110 21 43 chr5 103033980 103034352 -96595798 + THE1B LTR MaLR 1 364 0 291 283 52 99 chr5 103034352 103034510 -96595640 + MIR SINE MIR 57 204 -58 233 257 43 14 chr5 103035572 103035642 -96594508 + L2 LINE L2 2301 2372 -942 245 88 0 0 chr5 103035642 103035676 -96594474 + MER92B LTR ERV1 1 34 -602 363 150 0 0 chr5 103035895 103035955 -96594195 + MER92C LTR ERV1 491 550 -4 1715 151 42 45 chr5 103035998 103036309 -96593841 - AluJb SINE Alu 0 312 3 1810 285 50 26 chr5 103036309 103037200 -96592950 + L2 LINE L2 2414 3311 -2 4684 191 32 9 chr5 103038025 103039445 -96590705 - L1MB1 LINE L1 0 6168 4717 205 309 119 0 chr5 103039481 103039565 -96590585 + MIR SINE MIR 91 184 -78 25 31 0 0 chr5 103039599 103039631 -96590519 + AT_rich Low_complexity Low_complexity 1 32 0 324 303 189 30 chr5 103039766 103040002 -96590148 + L2 LINE L2 2889 3086 -227 2236 117 7 0 chr5 103040002 103040309 -96589841 - AluSx SINE Alu -3 309 1 324 303 189 30 chr5 103040309 103040438 -96589712 + L2 LINE L2 3086 3312 -1 378 0 0 0 chr5 103041717 103041759 -96588391 + (TG)n Simple_repeat Simple_repeat 2 43 0 289 239 124 18 chr5 103041867 103041980 -96588170 + L2 LINE L2 3188 3312 -1 718 198 0 0 chr5 103042614 103042730 -96587420 - FLAM_A SINE Alu -13 129 14 2272 103 10 3 chr5 103043265 103043575 -96586575 + AluSq SINE Alu 1 312 -1 1274 136 23 0 chr5 103043760 103043974 -96586176 + L1MA8 LINE L1 6067 6285 -6 1635 187 4 0 chr5 103043985 103044263 -96585887 - AluJo SINE Alu -23 289 11 586 91 0 124 chr5 103047831 103047952 -96582198 + MER50 LTR ERV1 499 604 -130 328 242 206 86 chr5 103050962 103051301 -96578849 + L1M2 LINE L1 541 920 -5929 22 0 0 0 chr5 103051638 103051660 -96578490 + GC_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 103053507 103053531 -96576619 + AT_rich Low_complexity Low_complexity 1 24 0 2492 72 3 0 chr5 103053951 103054258 -96575892 + AluSp SINE Alu 1 308 -5 225 297 22 77 chr5 103054687 103054778 -96575372 + MIR SINE MIR 58 143 -119 28 0 0 0 chr5 103055200 103055228 -96574922 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr5 103055464 103055489 -96574661 + AT_rich Low_complexity Low_complexity 1 25 0 233 351 0 26 chr5 103055526 103055640 -96574510 - MIR3 SINE MIR -9 199 89 21 0 0 0 chr5 103056412 103056433 -96573717 + AT_rich Low_complexity Low_complexity 1 21 0 1460 171 3 115 chr5 103069596 103069936 -96560214 + AluJo SINE Alu 1 302 0 21 71 0 0 chr5 103070918 103070960 -96559190 + AT_rich Low_complexity Low_complexity 1 42 0 27 0 0 0 chr5 103071167 103071194 -96558956 + AT_rich Low_complexity Low_complexity 1 27 0 286 109 43 0 chr5 103071578 103071624 -96558526 - MER116 DNA Mariner 0 80 33 1904 145 43 23 chr5 103074206 103074510 -96555640 - AluJb SINE Alu -2 310 1 2092 113 20 7 chr5 103075223 103075515 -96554635 + AluSx SINE Alu 1 296 -16 485 305 59 30 chr5 103076569 103076805 -96553345 + MIR SINE MIR 2 244 -18 22 0 0 30 chr5 103077857 103077876 -96552274 + AT_rich Low_complexity Low_complexity 1 20 -12 2369 92 0 0 chr5 103077876 103078182 -96551968 - AluSc SINE Alu -3 306 1 22 0 0 30 chr5 103078182 103078195 -96551955 + AT_rich Low_complexity Low_complexity 20 32 0 194 250 105 26 chr5 103078941 103079017 -96551133 + MIR SINE MIR 174 255 -7 979 284 60 54 chr5 103079053 103079589 -96550561 + L2 LINE L2 2245 2783 -531 1399 229 82 26 chr5 103079592 103080093 -96550057 + L1MC4 LINE L1 7508 7802 -6 501 253 313 13 chr5 103080151 103080467 -96549683 + L2 LINE L2 2855 3265 -48 282 160 0 0 chr5 103080488 103080538 -96549612 + GA-rich Low_complexity Low_complexity 3 52 0 216 182 45 0 chr5 103080781 103080825 -96549325 - L2 LINE L2 -16 3297 3252 302 300 54 54 chr5 103080845 103080975 -96549175 - MIR SINE MIR -76 132 3 330 360 44 0 chr5 103081571 103081685 -96548465 - L2 LINE L2 -4 3268 3150 290 264 74 8 chr5 103081851 103081972 -96548178 - MLT1F1 LTR MaLR -108 459 331 11204 156 56 30 chr5 103082342 103082705 -96547445 + L1MA5A LINE L1 2488 2840 -3457 1593 159 93 14 chr5 103082705 103082994 -96547156 + AluJo SINE Alu 1 312 0 11204 156 56 30 chr5 103082994 103084439 -96545711 + L1MA5A LINE L1 2840 4246 -2051 2345 105 3 0 chr5 103084439 103084744 -96545406 + AluSp SINE Alu 1 306 -7 11204 156 56 30 chr5 103084744 103086493 -96543657 + L1MA5A LINE L1 4246 6148 -149 1418 183 52 42 chr5 103086493 103086799 -96543351 + AluJo SINE Alu 1 309 -3 11204 156 56 30 chr5 103086799 103086859 -96543291 + L1MA5A LINE L1 6148 6205 -92 296 175 16 0 chr5 103086897 103086960 -96543190 + (TATG)n Simple_repeat Simple_repeat 4 67 0 1820 156 3 7 chr5 103086963 103087246 -96542904 - AluJo SINE Alu -30 282 1 24 32 0 0 chr5 103087246 103087277 -96542873 + AT_rich Low_complexity Low_complexity 1 31 0 1028 204 0 0 chr5 103088116 103088292 -96541858 - AluJo/FRAM SINE Alu -6 306 131 755 201 5 62 chr5 103088292 103088486 -96541664 - AluJo SINE Alu -121 191 9 999 218 122 55 chr5 103089447 103089718 -96540432 - AluJb SINE Alu -13 289 1 458 231 128 0 chr5 103090214 103090331 -96539819 - MIR SINE MIR -26 236 105 1697 179 0 3 chr5 103090384 103090669 -96539481 + AluJb SINE Alu 1 284 -28 180 0 0 0 chr5 103090672 103090692 -96539458 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 259 175 136 29 chr5 103090734 103090837 -96539313 + HAL1 LINE L1 2284 2397 -110 369 0 0 0 chr5 103090873 103090914 -96539236 + (TG)n Simple_repeat Simple_repeat 2 42 0 1895 56 0 0 chr5 103091634 103091866 -96538284 + SVA Other Other 1149 1380 -6 426 254 52 72 chr5 103092527 103092874 -96537276 + L1M4 LINE L1 4817 5156 -990 339 227 47 81 chr5 103093202 103093296 -96536854 + L1MEd LINE L1 1073 1160 -4959 1941 72 247 0 chr5 103093296 103093588 -96536562 + THE1B LTR MaLR 1 364 0 339 227 47 81 chr5 103093588 103093665 -96536485 + L1MEd LINE L1 1160 1238 -4881 12616 185 32 26 chr5 103093834 103094711 -96535439 + L1PB1 LINE L1 1029 1899 -4968 226 59 29 0 chr5 103094711 103094745 -96535405 - MADE1 DNA Mariner -45 35 1 12616 185 32 26 chr5 103094745 103098848 -96531302 + L1PB1 LINE L1 1899 6100 -767 2853 7 0 0 chr5 103098848 103099156 -96530994 + AluY SINE Alu 1 308 -3 12616 185 32 26 chr5 103099156 103099929 -96530221 + L1PB1 LINE L1 6100 6867 0 237 94 0 0 chr5 103100258 103100290 -96529860 - MLT1A2 LTR MaLR 0 374 343 1268 232 55 15 chr5 103100610 103100938 -96529212 + MER58B DNA MER1_type 1 341 0 1669 138 13 69 chr5 103101659 103101964 -96528186 - AluJo SINE Alu -20 292 5 1992 267 56 38 chr5 103102256 103102844 -96527306 + HAL1 LINE L1 1562 2175 -332 1670 188 14 0 chr5 103102844 103103131 -96527019 - AluJb SINE Alu -18 294 4 1992 267 56 38 chr5 103103131 103103471 -96526679 + HAL1 LINE L1 2175 2507 0 240 130 0 0 chr5 103103553 103103599 -96526551 + (TA)n Simple_repeat Simple_repeat 1 46 0 588 202 36 73 chr5 103103732 103103831 -96526319 + Charlie2 DNA MER1_type 2605 2706 -156 3321 89 16 7 chr5 103103831 103104278 -96525872 - MLT2A2 LTR ERVL -2 451 1 588 202 36 73 chr5 103104278 103104426 -96525724 + Charlie2 DNA MER1_type 2706 2843 -19 258 292 80 51 chr5 103104958 103105095 -96525055 + MIR SINE MIR 3 143 -119 9756 195 15 7 chr5 103105113 103108012 -96522138 + L1PA13 LINE L1 1183 4113 -2684 2026 65 0 14 chr5 103108012 103108282 -96521868 + L1PA13 LINE L1 5890 6162 -1 2128 74 78 0 chr5 103108315 103108598 -96521552 + AluY SINE Alu 1 305 -6 210 260 18 142 chr5 103109071 103109240 -96520910 + L2 LINE L2 1633 1780 -1534 749 180 0 8 chr5 103109243 103109371 -96520779 + FLAM_C SINE Alu 1 127 -16 449 313 47 33 chr5 103109409 103109620 -96520530 + L2 LINE L2 1773 1986 -1328 472 223 107 8 chr5 103109754 103109875 -96520275 + FLAM_C SINE Alu 1 133 -10 2299 64 0 14 chr5 103109896 103110191 -96519959 + AluY SINE Alu 1 291 -20 27 87 0 0 chr5 103110198 103110267 -96519883 + AT_rich Low_complexity Low_complexity 1 69 0 737 202 0 0 chr5 103110363 103110492 -96519658 + FLAM_C SINE Alu 1 129 -4 376 337 50 0 chr5 103111624 103111805 -96518345 - L2 LINE L2 -976 2338 2149 2464 132 3 3 chr5 103111807 103112171 -96517979 - THE1B LTR MaLR 0 364 1 283 261 34 0 chr5 103112362 103112450 -96517700 + MLT1L LTR MaLR 102 192 -423 211 146 36 0 chr5 103112451 103112506 -96517644 + (TA)n Simple_repeat Simple_repeat 2 58 0 441 0 0 0 chr5 103112523 103112572 -96517578 + (CA)n Simple_repeat Simple_repeat 2 50 0 235 276 0 0 chr5 103112576 103112634 -96517516 + MLT1L LTR MaLR 217 274 -341 386 254 224 5 chr5 103112677 103112878 -96517272 + MLT1L LTR MaLR 357 601 -14 186 254 18 0 chr5 103112908 103112963 -96517187 - L2 LINE L2 -1320 1994 1939 1608 234 41 26 chr5 103113105 103113145 -96517005 - MLT2F LTR ERVL -18 645 607 432 0 0 0 chr5 103113145 103113193 -96516957 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 1608 234 41 26 chr5 103113193 103113738 -96516412 - MLT2F LTR ERVL -56 607 3 239 316 94 17 chr5 103114333 103114450 -96515700 + MIR3 SINE MIR 70 195 -13 1746 144 86 14 chr5 103114688 103114979 -96515171 - AluSx SINE Alu 0 312 1 321 247 40 122 chr5 103115193 103115671 -96514479 + L1M4 LINE L1 5285 5656 -528 2402 95 0 0 chr5 103115906 103116212 -96513938 + AluSx SINE Alu 1 306 -6 357 259 179 23 chr5 103116334 103116597 -96513553 + HAL1b LINE L1 279 582 -766 27 62 0 0 chr5 103116766 103116814 -96513336 + GC_rich Low_complexity Low_complexity 1 48 0 546 151 109 0 chr5 103116882 103117001 -96513149 - MER61C LTR ERV1 -198 236 105 3388 128 17 15 chr5 103117026 103117811 -96512339 - MER61C-int LTR ERV1 0 6934 3504 1091 53 0 0 chr5 103117811 103117942 -96512208 - AluSp/q SINE Alu -2 311 181 8489 160 48 17 chr5 103117949 103119731 -96510419 - MER61C-int LTR ERV1 -764 5182 3347 5485 117 59 108 chr5 103119769 103119934 -96510216 - MER61C-int LTR ERV1 -391 4826 4654 2448 75 0 0 chr5 103119934 103120227 -96509923 - AluY SINE Alu -18 293 1 5485 117 59 108 chr5 103120227 103120439 -96509711 - MER61C-int LTR ERV1 -563 4654 4433 2170 100 28 0 chr5 103120439 103120728 -96509422 + AluSx SINE Alu 1 297 -15 5485 117 59 108 chr5 103120728 103122748 -96507402 - MER61C-int LTR ERV1 -784 4433 379 2198 100 7 7 chr5 103122748 103123039 -96507111 - AluSq SINE Alu -22 291 1 5485 117 59 108 chr5 103123039 103123169 -96506981 - MER61C-int LTR ERV1 -4838 379 244 437 237 22 79 chr5 103123455 103123594 -96506556 - MER61C-int LTR ERV1 -5068 149 19 1725 130 102 12 chr5 103123610 103123932 -96506218 - MER61C LTR ERV1 0 434 84 5256 154 60 32 chr5 103123961 103125145 -96505005 + L1MC1 LINE L1 5096 6305 -28 1809 141 32 7 chr5 103125151 103125434 -96504716 + AluJo SINE Alu 3 292 -20 325 238 63 66 chr5 103125457 103125644 -96504506 + L1ME1 LINE L1 3163 3351 -2795 2096 212 71 101 chr5 103125661 103126384 -96503766 + L1ME1 LINE L1 3941 4684 -1462 2248 79 3 7 chr5 103126384 103126676 -96503474 - AluSg SINE Alu -19 291 1 2096 212 71 101 chr5 103126676 103126903 -96503247 + L1ME1 LINE L1 4684 4856 -1290 600 242 0 8 chr5 103126903 103127035 -96503115 + FLAM_A SINE Alu 1 131 -2 2096 212 71 101 chr5 103127035 103127186 -96502964 + L1ME1 LINE L1 4856 5010 -1136 383 108 0 0 chr5 103127186 103127242 -96502908 + AluJb SINE Alu 211 260 -42 1301 219 84 6 chr5 103127245 103127565 -96502585 + L1ME1 LINE L1 5793 6137 -29 671 172 0 39 chr5 103127783 103127911 -96502239 + FLAM_A SINE Alu 2 124 -9 186 359 39 13 chr5 103128176 103128254 -96501896 + MER5B DNA MER1_type 94 173 -5 602 273 172 36 chr5 103128425 103128687 -96501463 - L2 LINE L2 -40 3273 2961 2903 6 0 0 chr5 103128687 103129005 -96501145 - AluYb8 SINE Alu 0 318 1 602 273 172 36 chr5 103129005 103129050 -96501100 - L2 LINE L2 -352 2961 2924 1874 145 24 0 chr5 103129165 103129454 -96500696 - AluSx SINE Alu -16 296 1 208 263 18 0 chr5 103129496 103129553 -96500597 - L2 LINE L2 -954 2360 2303 30 27 0 0 chr5 103129710 103129747 -96500403 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr5 103130978 103131010 -96499140 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 103131671 103131693 -96498457 + AT_rich Low_complexity Low_complexity 1 22 0 39 22 0 0 chr5 103136041 103136087 -96494063 + AT_rich Low_complexity Low_complexity 1 46 0 2622 199 126 10 chr5 103136363 103137062 -96493088 - L1MC4a LINE L1 0 7808 7029 407 181 0 11 chr5 103137773 103137867 -96492283 + L1MA9 LINE L1 6211 6303 -9 198 333 30 15 chr5 103138175 103138241 -96491909 + MIR SINE MIR 38 104 -104 294 292 0 42 chr5 103138251 103138347 -96491803 + MER96 DNA MER1_type? 83 174 -1 1261 138 40 49 chr5 103138722 103138947 -96491203 - AluSc SINE Alu -86 223 1 21 0 0 0 chr5 103139025 103139046 -96491104 + AT_rich Low_complexity Low_complexity 1 21 0 1671 166 4 0 chr5 103139049 103139327 -96490823 + AluSx SINE Alu 30 308 -4 21 36 0 0 chr5 103139683 103139711 -96490439 + AT_rich Low_complexity Low_complexity 1 28 0 1573 149 33 60 chr5 103141543 103141845 -96488305 + AluJb SINE Alu 1 294 -18 650 264 109 10 chr5 103142031 103142224 -96487926 - L2 LINE L2 -4 3309 3098 683 314 102 37 chr5 103142301 103142626 -96487524 - L2 LINE L2 -337 2977 2632 284 0 0 27 chr5 103143254 103143291 -96486859 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 232 222 14 14 chr5 103143829 103143901 -96486249 + (TA)n Simple_repeat Simple_repeat 2 73 0 226 234 0 0 chr5 103144142 103144189 -96485961 - MIR SINE MIR -40 222 176 195 178 44 0 chr5 103144204 103144249 -96485901 - MIR SINE MIR -215 47 1 216 198 25 25 chr5 103144258 103144339 -96485811 + (TAAA)n Simple_repeat Simple_repeat 1 81 0 752 218 152 33 chr5 103144453 103144696 -96485454 + MER5C DNA MER1_type 52 323 -1 1366 184 12 64 chr5 103144870 103144941 -96485209 + AluJb SINE Alu 1 74 -238 1944 119 23 20 chr5 103144941 103145243 -96484907 - AluSx SINE Alu -7 305 3 1366 184 12 64 chr5 103145243 103145497 -96484653 + AluJb SINE Alu 74 309 -3 378 356 0 0 chr5 103146160 103146337 -96483813 + T-rich Low_complexity Low_complexity 1 177 0 270 0 0 0 chr5 103146768 103146798 -96483352 + (CA)n Simple_repeat Simple_repeat 1 30 0 22 35 0 0 chr5 103147198 103147227 -96482923 + AT_rich Low_complexity Low_complexity 1 29 0 270 0 0 0 chr5 103148513 103148543 -96481607 + (A)n Simple_repeat Simple_repeat 1 30 0 23 33 0 0 chr5 103148597 103148627 -96481523 + AT_rich Low_complexity Low_complexity 1 30 0 1096 183 60 4 chr5 103148658 103148909 -96481241 + L1MA4 LINE L1 6024 6288 -12 1630 160 7 25 chr5 103149988 103150269 -96479881 - AluJo SINE Alu -34 278 3 23 33 0 0 chr5 103150274 103150304 -96479846 + AT_rich Low_complexity Low_complexity 1 30 0 246 265 29 0 chr5 103150423 103150491 -96479659 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 1768 116 0 44 chr5 103151597 103151872 -96478278 + AluSx SINE Alu 37 299 -13 331 299 152 8 chr5 103153881 103154030 -96476120 + L1ME4a LINE L1 5564 5690 -431 1575 205 0 17 chr5 103154030 103154328 -96475822 + AluJb SINE Alu 1 293 -19 331 299 152 8 chr5 103154328 103154422 -96475728 + L1ME4a LINE L1 5690 5842 -279 878 294 115 21 chr5 103154965 103155445 -96474705 + L1MCc LINE L1 11 535 -5888 448 229 0 0 chr5 103155534 103155630 -96474520 + MER96B DNA MER1_type? 1 96 -321 226 159 203 0 chr5 103155679 103155748 -96474402 + MER96B DNA MER1_type? 191 273 -144 1109 253 62 11 chr5 103155750 103156095 -96474055 + L1M4 LINE L1 2732 3109 -3037 1791 185 3 6 chr5 103156095 103156408 -96473742 + AluJb SINE Alu 1 312 0 1109 253 62 11 chr5 103156408 103156533 -96473617 + L1M4 LINE L1 3109 3226 -2920 436 175 134 0 chr5 103156526 103156623 -96473527 + L1M4 LINE L1 3603 3712 -2434 * 230 300 29 0 chr5 103157317 103157387 -96472763 + MIR SINE MIR 176 247 -15 272 314 29 22 chr5 103157417 103157554 -96472596 + L2 LINE L2 2573 2710 -604 216 250 0 0 chr5 103157567 103157615 -96472535 + L2 LINE L2 3261 3308 -5 255 247 39 52 chr5 103157931 103158008 -96472142 - L2 LINE L2 0 3313 3238 216 0 0 0 chr5 103158397 103158421 -96471729 + (T)n Simple_repeat Simple_repeat 1 24 0 1293 164 0 0 chr5 103158657 103158865 -96471285 - AluJb SINE Alu -15 297 90 187 346 58 29 chr5 103158875 103158979 -96471171 - MIR SINE MIR -64 144 38 28 0 0 0 chr5 103160203 103160231 -96469919 + AT_rich Low_complexity Low_complexity 1 28 0 1804 122 24 7 chr5 103160674 103160970 -96469180 + L1PB1 LINE L1 5566 5866 -285 324 0 0 0 chr5 103160971 103161007 -96469143 + (TA)n Simple_repeat Simple_repeat 2 37 0 1376 93 127 0 chr5 103161007 103161212 -96468938 - AluSg/x SINE Alu -7 303 73 2542 56 0 3 chr5 103161212 103161518 -96468632 - AluY SINE Alu -6 305 1 1920 116 3 3 chr5 103161518 103161812 -96468338 + L1PB1 LINE L1 5858 6151 0 1547 172 9 56 chr5 103161853 103162172 -96467978 - AluJo SINE Alu -4 308 5 2155 109 0 3 chr5 103162253 103162546 -96467604 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr5 103162686 103162708 -96467442 + AT_rich Low_complexity Low_complexity 1 22 0 419 148 57 11 chr5 103163136 103163224 -96466926 + MER112 DNA MER1_type 165 256 -4 518 236 257 0 chr5 103163231 103163371 -96466779 + MER5A DNA MER1_type 14 189 0 364 274 43 102 chr5 103163430 103163616 -96466534 + MIR SINE MIR 88 262 0 25 31 0 0 chr5 103163868 103163900 -96466250 + AT_rich Low_complexity Low_complexity 1 32 0 649 226 42 42 chr5 103164128 103164318 -96465832 + L1MB8 LINE L1 5983 6172 -6 236 291 47 55 chr5 103164411 103164538 -96465612 + L2 LINE L2 3120 3245 -68 219 323 118 0 chr5 103164615 103164708 -96465442 + MIR SINE MIR 153 256 -6 583 165 39 0 chr5 103166875 103166978 -96463172 + U6 snRNA snRNA 1 107 0 1364 138 47 44 chr5 103166978 103167333 -96462817 + L1PA16 LINE L1 5781 6166 0 757 216 107 91 chr5 103167864 103168234 -96461916 + L1MC5 LINE L1 7311 7673 -288 1725 165 0 11 chr5 103168234 103168519 -96461631 - AluSx SINE Alu -28 284 3 757 216 107 91 chr5 103168519 103168673 -96461477 + L1MC5 LINE L1 7673 7849 -112 1916 167 0 0 chr5 103168673 103168985 -96461165 + AluSx SINE Alu 1 312 0 757 216 107 91 chr5 103168985 103169067 -96461083 + L1MC5 LINE L1 7849 7928 -33 229 247 55 14 chr5 103170177 103170250 -96459900 + MIR SINE MIR 85 160 -102 22 35 0 0 chr5 103170826 103170855 -96459295 + AT_rich Low_complexity Low_complexity 1 29 0 306 295 98 72 chr5 103171194 103171387 -96458763 + MIR SINE MIR 48 245 -17 566 238 157 27 chr5 103171462 103171647 -96458503 - MER58C DNA MER1_type -3 212 4 2216 105 3 0 chr5 103171971 103172265 -96457885 - AluSp SINE Alu -18 295 1 491 236 132 11 chr5 103172425 103172607 -96457543 + L1MC5 LINE L1 7723 7926 -35 1977 123 25 3 chr5 103172619 103172903 -96457247 + AluSx SINE Alu 6 295 -17 969 158 23 12 chr5 103173069 103173240 -96456910 + AluJb SINE Alu 1 173 -139 423 153 0 0 chr5 103173240 103173312 -96456838 + AluS SINE Alu 224 295 -17 36 23 0 0 chr5 103175341 103175384 -96454766 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr5 103175602 103175631 -96454519 + AT_rich Low_complexity Low_complexity 1 29 0 1071 213 119 44 chr5 103176184 103176503 -96453647 + MER2 DNA MER2_type 2 344 0 2412 84 0 0 chr5 103177145 103177453 -96452697 + AluY SINE Alu 1 308 -3 1961 129 0 39 chr5 103177586 103177896 -96452254 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 103178887 103178908 -96451242 + AT_rich Low_complexity Low_complexity 1 21 0 195 129 0 0 chr5 103180965 103180996 -96449154 + (CTG)n Simple_repeat Simple_repeat 2 32 0 26 0 0 0 chr5 103182777 103182803 -96447347 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 103183500 103183521 -96446629 + AT_rich Low_complexity Low_complexity 1 21 0 245 184 41 0 chr5 103183633 103183682 -96446468 - L2 LINE L2 -1 3312 3262 227 245 19 0 chr5 103184077 103184130 -96446020 + L2 LINE L2 3246 3299 -14 2344 91 3 0 chr5 103184449 103184756 -96445394 + AluSp SINE Alu 1 308 -5 328 200 96 9 chr5 103184756 103184861 -96445289 + L1MC4 LINE L1 5816 5933 -1875 281 215 108 0 chr5 103186120 103186213 -96443937 - L1MC5 LINE L1 -52 7909 7807 27 49 0 0 chr5 103186266 103186307 -96443843 + AT_rich Low_complexity Low_complexity 1 41 0 1661 245 109 97 chr5 103186379 103188057 -96442093 - L1MC5 LINE L1 -542 7419 5673 2350 251 68 39 chr5 103188137 103188290 -96441860 + L1MC4 LINE L1 6763 6910 -1132 279 0 0 0 chr5 103188290 103188321 -96441829 + (TA)n Simple_repeat Simple_repeat 2 32 0 2350 251 68 39 chr5 103188321 103189036 -96441114 + L1MC4 LINE L1 6910 7656 -386 23 0 0 0 chr5 103189203 103189226 -96440924 + AT_rich Low_complexity Low_complexity 1 23 0 1787 162 3 7 chr5 103189533 103189840 -96440310 + AluSx SINE Alu 3 308 0 1714 164 7 20 chr5 103190333 103190625 -96439525 + AluJo SINE Alu 2 289 -23 27 0 0 0 chr5 103190829 103190856 -96439294 + AT_rich Low_complexity Low_complexity 1 27 0 718 255 58 95 chr5 103191095 103191413 -96438737 + MLT1J LTR MaLR 1 269 -177 363 232 152 0 chr5 103192204 103192303 -96437847 + MER112 DNA MER1_type 1 114 -146 289 238 12 62 chr5 103192846 103193006 -96437144 + L1MC5 LINE L1 7766 7917 -44 1965 146 7 3 chr5 103193054 103193355 -96436795 + AluSq SINE Alu 1 302 -11 2336 102 3 0 chr5 103193410 103193714 -96436436 + AluSp SINE Alu 4 308 -5 2374 63 0 10 chr5 103195204 103195503 -96434647 - AluY SINE Alu -15 296 1 2046 102 44 0 chr5 103195630 103195923 -96434227 + AluSc SINE Alu 1 306 -3 3046 230 118 91 chr5 103196325 103197374 -96432776 + L1MC3 LINE L1 6025 7044 -741 236 198 47 81 chr5 103197374 103197460 -96432690 + MLT1H LTR MaLR 80 162 -387 3046 230 118 91 chr5 103197460 103197655 -96432495 + L1MC3 LINE L1 7044 7232 -553 2188 124 0 7 chr5 103197655 103197962 -96432188 + AluSx SINE Alu 1 305 -7 3046 230 118 91 chr5 103197962 103198182 -96431968 + L1MC3 LINE L1 7232 7617 -168 26 30 0 0 chr5 103198183 103198216 -96431934 + AT_rich Low_complexity Low_complexity 1 33 0 321 284 0 0 chr5 103198229 103198317 -96431833 + MIR SINE MIR 123 210 -52 526 230 200 0 chr5 103198547 103198682 -96431468 - MER5A DNA MER1_type -12 177 16 2015 111 10 17 chr5 103199012 103199309 -96430841 + AluSg SINE Alu 1 295 -15 2168 117 0 3 chr5 103199848 103200148 -96430002 + AluSx SINE Alu 1 299 -13 2097 75 34 17 chr5 103200561 103200855 -96429295 - AluSp SINE Alu -14 299 1 1528 170 47 29 chr5 103201116 103201417 -96428733 + AluJb SINE Alu 1 306 0 2225 110 0 7 chr5 103201836 103202144 -96428006 + AluSx SINE Alu 1 306 -6 526 291 60 60 chr5 103202316 103202404 -96427746 - MIR SINE MIR -1 261 174 656 222 0 22 chr5 103202404 103202539 -96427611 - FLAM_C SINE Alu -1 132 1 526 291 60 60 chr5 103202539 103202701 -96427449 - MIR SINE MIR -87 175 11 912 170 112 0 chr5 103202896 103203084 -96427066 + MER3 DNA MER1_type 1 209 0 21 36 0 0 chr5 103203683 103203711 -96426439 + AT_rich Low_complexity Low_complexity 1 28 0 379 273 130 90 chr5 103205179 103205765 -96424385 + L1M2 LINE L1 709 1248 -5601 201 74 0 0 chr5 103205946 103205973 -96424177 + (CCG)n Simple_repeat Simple_repeat 3 29 0 243 226 0 0 chr5 103206047 103206100 -96424050 + (CCG)n Simple_repeat Simple_repeat 2 54 0 758 167 7 0 chr5 103207214 103207352 -96422798 - FLAM_C SINE Alu -2 141 3 2279 114 0 3 chr5 103209380 103209687 -96420463 - AluSx SINE Alu -6 306 1 423 214 37 4 chr5 103209751 103209847 -96420303 - MER2 DNA MER2_type -139 100 4 252 355 93 67 chr5 103210452 103210796 -96419354 - L2 LINE L2 -4 3268 2916 2047 113 30 20 chr5 103211374 103211676 -96418474 + AluY SINE Alu 1 305 -6 388 253 133 25 chr5 103212291 103212449 -96417701 - MER5B DNA MER1_type -3 175 1 712 214 9 86 chr5 103212557 103212777 -96417373 + MER20 DNA MER1_type 17 219 0 1373 237 97 9 chr5 103213033 103213592 -96416558 + L1ME3 LINE L1 5534 6153 -9 736 75 28 0 chr5 103213783 103213890 -96416260 - HY1 scRNA scRNA -1 111 2 235 333 0 0 chr5 103213896 103213956 -96416194 + MIR SINE MIR 47 106 -156 1446 120 113 55 chr5 103214383 103214674 -96415476 - MER46B DNA MER2_type 0 236 54 441 185 0 43 chr5 103214675 103214767 -96415383 + FLAM_A SINE Alu 47 134 -8 233 140 160 0 chr5 103214767 103214817 -96415333 - MER46B DNA MER2_type -303 58 1 254 272 320 0 chr5 103214817 103214920 -96415230 - MIR SINE MIR -108 154 19 265 180 16 16 chr5 103215064 103215125 -96415025 + MLT1K LTR MaLR 522 582 -6 426 330 105 67 chr5 103216380 103216541 -96413609 - L2 LINE L2 -14 3299 3146 551 220 0 53 chr5 103216541 103216673 -96413477 + FLAM_A SINE Alu 1 125 -8 426 330 105 67 chr5 103216673 103216957 -96413193 - L2 LINE L2 -167 3146 2837 29 0 0 0 chr5 103216969 103216998 -96413152 + AT_rich Low_complexity Low_complexity 1 29 0 675 314 90 46 chr5 103217615 103218170 -96411980 + L2 LINE L2 2625 3210 -103 309 322 79 42 chr5 103218550 103218870 -96411280 + MLT1L LTR MaLR 121 443 -172 654 165 66 8 chr5 103219003 103219124 -96411026 - FLAM_A SINE Alu -5 128 1 376 252 41 87 chr5 103219199 103219417 -96410733 + HAL1 LINE L1 2266 2473 -34 324 304 133 25 chr5 103220140 103220298 -96409852 + MER91A DNA MER1_type 19 193 -3 301 273 55 23 chr5 103220433 103220561 -96409589 - MER94 DNA DNA 0 134 3 1152 198 119 29 chr5 103221253 103221596 -96408554 - MLT1A2 LTR MaLR 0 374 1 21 0 0 0 chr5 103221645 103221666 -96408484 + AT_rich Low_complexity Low_complexity 1 21 0 918 289 95 19 chr5 103221715 103222085 -96408065 - HERV16 LTR ERVL -2472 2524 2127 * 1957 294 48 33 chr5 103222082 103222260 -96407890 - HERV16 LTR ERVL -2787 2209 2035 495 73 12 37 chr5 103222260 103222342 -96407808 - MADE1 DNA Mariner 0 80 1 1957 294 48 33 chr5 103222342 103223447 -96406703 - HERV16 LTR ERVL -2961 2035 843 2422 74 0 0 chr5 103224045 103224342 -96405808 - AluY SINE Alu -14 297 1 2694 208 108 77 chr5 103224475 103225311 -96404839 + MER21B LTR ERV1 1 862 -1 1403 143 111 66 chr5 103225315 103225489 -96404661 - MLT1A1 LTR MaLR -8 459 294 2386 88 3 0 chr5 103225489 103225786 -96404364 - AluSp SINE Alu -14 299 2 1403 143 111 66 chr5 103225786 103225947 -96404203 - MLT1A1 LTR MaLR -173 294 6 2040 123 0 4 chr5 103226079 103226356 -96403794 + AluSx SINE Alu 1 276 -36 281 327 45 55 chr5 103226379 103226599 -96403551 - LTR16B LTR ERVL -210 254 37 335 294 55 41 chr5 103226668 103226814 -96403336 + HAL1 LINE L1 267 414 -2093 284 182 0 0 chr5 103226831 103226886 -96403264 + MER58 DNA MER1_type 181 235 -106 2064 145 0 3 chr5 103226919 103227229 -96402921 - AluJb SINE Alu -3 309 1 1051 189 37 0 chr5 103227353 103227570 -96402580 - MER63B DNA MER1_type -203 233 9 1769 139 80 40 chr5 103227588 103227683 -96402467 + MLT1B LTR MaLR 1 91 -299 2201 126 0 7 chr5 103227683 103227985 -96402165 + AluSx SINE Alu 1 300 -12 1769 139 80 40 chr5 103227985 103228262 -96401888 + MLT1B LTR MaLR 91 388 -2 771 185 0 0 chr5 103228341 103228460 -96401690 + FLAM_C SINE Alu 1 119 -14 198 0 0 0 chr5 103228484 103228506 -96401644 + (CAA)n Simple_repeat Simple_repeat 3 24 0 705 156 35 81 chr5 103228569 103228742 -96401408 + MER63 DNA MER1_type 694 858 -203 216 303 0 79 chr5 103228776 103228852 -96401298 - L3 LINE CR1 -1466 111 42 2155 117 0 10 chr5 103229111 103229410 -96400740 + AluSx SINE Alu 1 296 -16 880 191 103 46 chr5 103229594 103229934 -96400216 + MSTD LTR MaLR 1 396 0 29 28 0 0 chr5 103230226 103230262 -96399888 + AT_rich Low_complexity Low_complexity 1 36 0 199 102 20 20 chr5 103230331 103230380 -96399770 + (TA)n Simple_repeat Simple_repeat 1 49 0 34 0 0 0 chr5 103230423 103230457 -96399693 + AT_rich Low_complexity Low_complexity 1 34 0 3219 65 30 7 chr5 103230517 103230951 -96399199 - MLT2A1 LTR ERVL 0 444 1 897 184 50 11 chr5 103231295 103231474 -96398676 - AluJo SINE Alu -7 305 120 25 0 0 0 chr5 103232437 103232462 -96397688 + AT_rich Low_complexity Low_complexity 1 25 0 7685 20 1 0 chr5 103232462 103234079 -96396071 - L1PA4 LINE L1 -5 6150 4535 325 310 9 17 chr5 103234495 103234611 -96395539 + MIR3 SINE MIR 85 199 -9 200 213 66 33 chr5 103234882 103234943 -96395207 + MIR SINE MIR 191 253 -9 * 249 114 0 0 chr5 103234910 103234945 -96395205 + L2 LINE L2 3267 3301 -12 451 113 0 0 chr5 103234948 103235019 -96395131 + L1MB7 LINE L1 6091 6161 -23 205 185 56 0 chr5 103235124 103235178 -96394972 + A-rich Low_complexity Low_complexity 3 59 0 839 169 0 0 chr5 103235218 103235342 -96394808 + AluJo/FLAM SINE Alu 1 124 -188 1853 167 0 0 chr5 103235342 103235624 -96394526 - AluJb SINE Alu -30 282 1 2315 74 3 7 chr5 103235758 103236055 -96394095 + AluSq SINE Alu 1 296 -17 1334 189 25 42 chr5 103236202 103236488 -96393662 + AluJo SINE Alu 14 294 -18 2294 118 0 0 chr5 103236757 103237063 -96393087 - AluSx SINE Alu -6 306 1 380 328 42 0 chr5 103237117 103237236 -96392914 - MIR3 SINE MIR -21 187 64 261 0 0 0 chr5 103237477 103237506 -96392644 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2089 132 0 0 chr5 103237509 103237798 -96392352 - AluSq SINE Alu -24 289 1 282 56 0 0 chr5 103238216 103238252 -96391898 + (CA)n Simple_repeat Simple_repeat 2 37 0 739 228 70 36 chr5 103238360 103238703 -96391447 + LTR16A LTR ERVL 73 449 -1 436 328 83 55 chr5 103238903 103238972 -96391178 + L2 LINE L2 2108 2174 -1140 750 189 0 0 chr5 103238972 103239099 -96391051 + FLAM_C SINE Alu 1 127 -6 436 328 83 55 chr5 103239099 103239426 -96390724 + L2 LINE L2 2174 2515 -799 300 250 125 0 chr5 103239834 103239898 -96390252 - L2 LINE L2 -54 3259 3188 2320 68 7 7 chr5 103241373 103241666 -96388484 + AluSp SINE Alu 1 293 -20 351 238 119 24 chr5 103242014 103242140 -96388010 + L2 LINE L2 3002 3139 -174 258 238 20 119 chr5 103242160 103242311 -96387839 - L1MC5 LINE L1 -77 7884 7749 294 272 87 10 chr5 103242318 103242421 -96387729 + L2 LINE L2 3147 3257 -56 1804 187 10 3 chr5 103242483 103242793 -96387357 - AluJb SINE Alu 0 312 1 280 231 15 15 chr5 103242793 103242858 -96387292 + L2 LINE L2 3249 3313 0 365 171 13 27 chr5 103242904 103242978 -96387172 - MLT1A2 LTR MaLR 0 376 312 1753 196 25 32 chr5 103242978 103243511 -96386639 - L1MB1 LINE L1 -1804 4342 3842 1969 143 37 12 chr5 103243518 103243923 -96386227 + L1MB1 LINE L1 4353 4767 -1379 4519 167 23 13 chr5 103243951 103245128 -96385022 + L1MB1 LINE L1 4973 6167 -1 484 336 58 58 chr5 103245506 103245922 -96384228 + MLT1K LTR MaLR 3 418 -170 593 263 165 18 chr5 103245924 103246148 -96384002 - MIR SINE MIR -5 257 1 280 233 27 100 chr5 103246205 103246287 -96383863 + MLT1K LTR MaLR 405 473 -115 2176 102 3 3 chr5 103246287 103246581 -96383569 - AluSg SINE Alu -16 294 1 280 233 27 100 chr5 103246581 103246648 -96383502 + MLT1K LTR MaLR 473 543 -45 234 284 45 45 chr5 103247304 103247459 -96382691 + L1ME2 LINE L1 5078 5232 -914 1745 166 0 14 chr5 103247543 103247833 -96382317 + AluJb SINE Alu 27 312 0 748 289 138 25 chr5 103247837 103248007 -96382143 + L1ME2 LINE L1 5330 5480 -684 1513 161 36 66 chr5 103248007 103248311 -96381839 + AluJo SINE Alu 1 295 -17 748 289 138 25 chr5 103248311 103248736 -96381414 + L1ME2 LINE L1 5480 5992 -172 305 288 92 0 chr5 103249101 103249254 -96380896 + MIR SINE MIR 47 213 -49 23 0 0 0 chr5 103249346 103249369 -96380781 + AT_rich Low_complexity Low_complexity 1 23 0 858 143 0 15 chr5 103249388 103249521 -96380629 - FLAM_C SINE Alu 0 133 3 2082 128 0 14 chr5 103249555 103249852 -96380298 - AluSx SINE Alu -19 293 1 932 181 0 30 chr5 103250245 103250411 -96379739 + AluJo SINE Alu 1 161 -151 517 161 17 35 chr5 103250437 103250611 -96379539 + GA-rich Low_complexity Low_complexity 1 171 0 458 189 0 0 chr5 103250629 103250724 -96379426 - AluJ/FRAM SINE Alu -1 311 217 619 194 47 16 chr5 103250762 103250891 -96379259 - FLAM_A SINE Alu 0 133 1 2075 124 44 102 chr5 103252163 103252204 -96377946 - MSTB LTR MaLR -1 425 383 1862 152 17 10 chr5 103252204 103252493 -96377657 + AluJb SINE Alu 4 294 -18 347 0 23 0 chr5 103252499 103252542 -96377608 + (GA)n Simple_repeat Simple_repeat 1 44 0 2075 124 44 102 chr5 103252542 103252944 -96377206 - MSTB LTR MaLR -48 378 1 1485 180 29 63 chr5 103255404 103255720 -96374430 - AluJo SINE Alu -7 305 1 776 159 0 36 chr5 103255722 103255860 -96374290 - FLAM_A SINE Alu 0 133 1 242 206 0 0 chr5 103255863 103255926 -96374224 + T-rich Low_complexity Low_complexity 2 64 0 1804 160 0 37 chr5 103255958 103256116 -96374034 - AluJb SINE Alu -23 289 146 435 38 0 0 chr5 103256116 103256169 -96373981 + (TA)n Simple_repeat Simple_repeat 1 53 0 1804 160 0 37 chr5 103256169 103256310 -96373840 - AluJb SINE Alu -166 146 1 768 169 0 8 chr5 103256313 103256437 -96373713 - FLAM_A SINE Alu -10 123 1 25 0 0 0 chr5 103256444 103256469 -96373681 + AT_rich Low_complexity Low_complexity 1 25 0 1268 202 74 61 chr5 103256571 103256725 -96373425 + MSTD LTR MaLR 1 152 -244 2085 126 24 3 chr5 103256725 103257019 -96373131 + AluSx SINE Alu 1 300 -12 1268 202 74 61 chr5 103257019 103257255 -96372895 + MSTD LTR MaLR 152 396 0 874 132 0 0 chr5 103257365 103257486 -96372664 - FLAM_C SINE Alu -22 121 1 4274 155 66 34 chr5 103257898 103259038 -96371112 + L1MA8 LINE L1 5115 6291 0 216 300 221 36 chr5 103259155 103259295 -96370855 + L2 LINE L2 3107 3272 0 711 188 0 0 chr5 103259343 103259455 -96370695 + FLAM_A SINE Alu 4 115 -18 990 177 0 6 chr5 103259785 103259960 -96370190 - FRAM SINE Alu -3 173 1 312 224 37 65 chr5 103259976 103260083 -96370067 + HAL1 LINE L1 143 246 -2261 1265 268 131 69 chr5 103260195 103260900 -96369250 + HAL1 LINE L1 408 1221 -1286 637 164 62 23 chr5 103260900 103261028 -96369122 + AluJo SINE Alu 1 133 -169 1265 268 131 69 chr5 103261028 103261537 -96368613 + HAL1 LINE L1 1221 1697 -810 2078 121 20 10 chr5 103261544 103261841 -96368309 + AluSx SINE Alu 1 300 -12 800 179 19 19 chr5 103261846 103262002 -96368148 + AluJo SINE Alu 136 291 -21 21 0 0 0 chr5 103262002 103262023 -96368127 + AT_rich Low_complexity Low_complexity 1 21 0 308 310 10 70 chr5 103262228 103262428 -96367722 + HAL1 LINE L1 1979 2166 -341 375 321 54 36 chr5 103262483 103262704 -96367446 + HAL1 LINE L1 2283 2507 0 634 289 39 90 chr5 103262784 103263076 -96367074 - LTR16B LTR ERVL 0 464 204 2311 92 0 0 chr5 103263076 103263389 -96366761 + AluSx SINE Alu 1 313 0 634 289 39 90 chr5 103263389 103263583 -96366567 - LTR16B LTR ERVL -260 204 2 183 341 24 0 chr5 103263666 103263748 -96366402 + MIR SINE MIR 110 193 -69 326 276 29 9 chr5 103263910 103264015 -96366135 + MLT1I LTR MaLR 100 206 -203 2002 131 7 36 chr5 103264171 103264476 -96365674 - AluSx SINE Alu -16 296 1 7265 19 6 1 chr5 103264654 103265503 -96364647 + L1PA3 LINE L1 5302 6154 -1 25 0 0 0 chr5 103265503 103265528 -96364622 + AT_rich Low_complexity Low_complexity 1 25 0 897 184 50 11 chr5 103266491 103266670 -96363480 + AluJo SINE Alu 120 305 -7 3219 65 30 7 chr5 103267014 103267448 -96362702 + MLT2A1 LTR ERVL 1 444 0 34 0 0 0 chr5 103267508 103267542 -96362608 + AT_rich Low_complexity Low_complexity 1 34 0 199 102 20 20 chr5 103267585 103267634 -96362516 + (TA)n Simple_repeat Simple_repeat 2 50 0 29 28 0 0 chr5 103267703 103267739 -96362411 + AT_rich Low_complexity Low_complexity 1 36 0 880 191 103 46 chr5 103268031 103268371 -96361779 - MSTD LTR MaLR 0 396 1 2155 117 0 10 chr5 103268555 103268854 -96361296 - AluSx SINE Alu -16 296 1 216 303 0 79 chr5 103269113 103269189 -96360961 + L3 LINE CR1 42 111 -1466 711 157 35 76 chr5 103269223 103269395 -96360755 - MER63 DNA MER1_type -203 858 694 198 0 0 0 chr5 103269458 103269480 -96360670 + (TTG)n Simple_repeat Simple_repeat 3 24 0 771 185 0 0 chr5 103269504 103269623 -96360527 - FLAM_C SINE Alu -14 119 1 622 171 0 43 chr5 103269804 103269921 -96360229 + AluJo SINE Alu 50 161 -151 517 161 17 35 chr5 103269947 103270121 -96360029 + GA-rich Low_complexity Low_complexity 1 171 0 458 189 0 0 chr5 103270139 103270234 -96359916 - AluJ/FRAM SINE Alu -1 311 217 619 194 47 16 chr5 103270273 103270402 -96359748 - FLAM_A SINE Alu 0 133 1 2075 124 44 102 chr5 103271674 103271715 -96358435 - MSTB LTR MaLR -1 425 383 1862 152 17 10 chr5 103271715 103272004 -96358146 + AluJb SINE Alu 4 294 -18 455 0 18 0 chr5 103272010 103272065 -96358085 + (GA)n Simple_repeat Simple_repeat 1 56 0 2075 124 44 102 chr5 103272065 103272467 -96357683 - MSTB LTR MaLR -48 378 1 1454 184 29 63 chr5 103274927 103275242 -96354908 - AluJo SINE Alu -8 304 1 776 159 0 36 chr5 103275244 103275382 -96354768 - FLAM_A SINE Alu 0 133 1 242 206 0 0 chr5 103275385 103275448 -96354702 + T-rich Low_complexity Low_complexity 2 64 0 1846 164 0 14 chr5 103275480 103275638 -96354512 - AluJb SINE Alu -23 289 135 504 48 0 0 chr5 103275638 103275701 -96354449 + (TA)n Simple_repeat Simple_repeat 2 64 0 1846 164 0 14 chr5 103275701 103275835 -96354315 - AluJb SINE Alu -177 135 1 768 169 0 8 chr5 103275838 103275962 -96354188 - FLAM_A SINE Alu -10 123 1 25 0 0 0 chr5 103275969 103275994 -96354156 + AT_rich Low_complexity Low_complexity 1 25 0 296 130 0 0 chr5 103276406 103276452 -96353698 - AluJ/FLAM SINE Alu -240 62 17 3938 130 18 3 chr5 103276452 103277112 -96353038 + L1PB4 LINE L1 5461 6130 -26 1392 186 21 45 chr5 103277113 103277404 -96352746 + AluJb SINE Alu 6 289 -23 24 0 0 0 chr5 103277456 103277480 -96352670 + AT_rich Low_complexity Low_complexity 1 24 0 1060 157 55 71 chr5 103277735 103277990 -96352160 - AluSx SINE Alu -9 303 53 24 32 0 0 chr5 103277999 103278030 -96352120 + AT_rich Low_complexity Low_complexity 1 31 0 2278 91 0 19 chr5 103278085 103278392 -96351758 - AluSg SINE Alu -8 302 2 3773 97 16 9 chr5 103278481 103279057 -96351093 + L1PA13 LINE L1 5564 6143 -20 2220 94 6 9 chr5 103279230 103279558 -96350592 + L1PA13 LINE L1 5818 6144 -19 1347 52 6 0 chr5 103279577 103279749 -96350401 + L1PA8 LINE L1 5997 6169 -3 1756 198 0 3 chr5 103280396 103280699 -96349451 + AluJb SINE Alu 1 302 -10 2608 172 30 38 chr5 103281055 103281612 -96348538 + MLT2B3 LTR ERVL 2 554 0 2178 133 3 0 chr5 103281809 103282118 -96348032 + AluSq SINE Alu 1 310 -3 662 252 178 0 chr5 103282168 103282382 -96347768 - MIR SINE MIR 0 262 11 1794 176 3 10 chr5 103283343 103283639 -96346511 - AluJo SINE Alu -18 294 1 2349 99 3 0 chr5 103284080 103284382 -96345768 + AluSx SINE Alu 1 303 -9 351 298 175 32 chr5 103284466 103284718 -96345432 - L2 LINE L2 -831 2483 2196 315 268 63 55 chr5 103285233 103285360 -96344790 - MER5A DNA MER1_type -6 183 56 243 286 50 79 chr5 103285255 103285395 -96344755 + MER5A DNA MER1_type 38 173 -16 * 1373 244 82 0 chr5 103285486 103285937 -96344213 + Charlie4a DNA MER1_type 17 504 -4 208 320 74 16 chr5 103286181 103286303 -96343847 - MIR SINE MIR -41 221 93 396 313 17 0 chr5 103287812 103287927 -96342223 + MER5B DNA MER1_type 4 120 -58 2465 77 0 3 chr5 103287933 103288233 -96341917 - AluSq SINE Alu -13 300 2 463 285 94 21 chr5 103288680 103288915 -96341235 + L1ME4a LINE L1 5800 6051 -70 4445 142 13 4 chr5 103288939 103289701 -96340449 - L1PB4 LINE L1 0 6156 5388 802 135 38 8 chr5 103290480 103290613 -96339537 - AluJo SINE Alu -175 137 1 308 298 125 18 chr5 103291818 103291986 -96338164 - Charlie8 DNA MER1_type -2177 240 55 932 243 21 32 chr5 103292023 103292303 -96337847 + L1MC/D LINE L1 5506 5782 -2026 742 226 23 34 chr5 103292463 103292640 -96337510 - FAM SINE Alu 0 175 1 251 282 0 0 chr5 103292692 103292770 -96337380 + (TA)n Simple_repeat Simple_repeat 2 79 0 199 311 66 0 chr5 103292775 103292836 -96337314 + L2 LINE L2 3208 3272 0 192 77 0 0 chr5 103292872 103292898 -96337252 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1715 181 11 3 chr5 103292898 103293185 -96336965 - AluJo SINE Alu -23 289 1 332 271 129 36 chr5 103293357 103293456 -96336694 + MIR SINE MIR 49 166 -96 2063 114 10 0 chr5 103293456 103293745 -96336405 + AluSx SINE Alu 1 292 -20 332 271 129 36 chr5 103293745 103293785 -96336365 + MIR SINE MIR 166 201 -61 216 135 0 0 chr5 103293787 103293824 -96336326 + (TA)n Simple_repeat Simple_repeat 1 37 0 1627 184 30 0 chr5 103294473 103294744 -96335406 - AluJb SINE Alu -29 283 5 1845 164 3 0 chr5 103294758 103295056 -96335094 - AluSq SINE Alu -14 299 1 2124 120 3 22 chr5 103295581 103295898 -96334252 + AluSx SINE Alu 1 311 -1 22 35 0 0 chr5 103296570 103296599 -96333551 + AT_rich Low_complexity Low_complexity 1 29 0 2002 150 7 7 chr5 103296915 103297215 -96332935 - AluSx SINE Alu -12 300 1 534 167 33 0 chr5 103297873 103297993 -96332157 - L1MC4 LINE L1 0 8042 7919 306 316 18 18 chr5 103298208 103298322 -96331828 + L3 LINE CR1 1456 1569 -8 503 331 141 29 chr5 103299974 103300421 -96329729 + L2 LINE L2 1128 1624 -1690 181 368 0 0 chr5 103300801 103300877 -96329273 + L2 LINE L2 1895 1970 -1344 207 0 0 0 chr5 103352122 103352145 -96278005 + (A)n Simple_repeat Simple_repeat 1 23 0 5876 115 11 6 chr5 103353119 103354416 -96275734 + L1PA10 LINE L1 4825 6126 -42 897 78 16 8 chr5 103354418 103354546 -96275604 + L1PA10 LINE L1 6024 6152 -16 20039 59 4 2 chr5 103354981 103357660 -96272490 + L1P2 LINE L1 2788 5472 -682 2820 28 0 0 chr5 103357902 103358220 -96271930 - AluYb8 SINE Alu 0 318 1 2343 113 0 0 chr5 103359601 103359910 -96270240 - AluSg1 SINE Alu 0 309 1 755 274 30 0 chr5 103360218 103360419 -96269731 + MIR SINE MIR 51 257 -5 300 289 67 72 chr5 103361105 103361299 -96268851 - MLT1L LTR MaLR -418 197 5 22 0 0 0 chr5 103361552 103361574 -96268576 + AT_rich Low_complexity Low_complexity 1 22 0 415 203 62 23 chr5 103361645 103361773 -96268377 - L1MC4 LINE L1 -140 7902 7770 906 191 6 6 chr5 103361773 103361935 -96268215 - FRAM SINE Alu -17 159 1 3086 207 81 86 chr5 103361935 103363021 -96267129 - L1MC4 LINE L1 -263 7779 6699 1911 183 101 46 chr5 103363280 103363756 -96266394 - MLT1D LTR MaLR -3 502 1 534 284 61 57 chr5 103363927 103364130 -96266020 - MLT1K LTR MaLR -125 463 257 1561 151 43 33 chr5 103364130 103364429 -96265721 + AluJo SINE Alu 1 302 -10 534 284 61 57 chr5 103364429 103364454 -96265696 - MLT1K LTR MaLR -331 257 234 31 82 0 0 chr5 103364605 103364678 -96265472 + AT_rich Low_complexity Low_complexity 1 73 0 29 28 0 0 chr5 103364732 103364768 -96265382 + AT_rich Low_complexity Low_complexity 1 36 0 5937 107 0 3 chr5 103367477 103368604 -96261546 - L1PA13 LINE L1 -2 6161 5029 1601 194 0 23 chr5 103368876 103369180 -96260970 + AluJb SINE Alu 2 298 -14 515 286 95 11 chr5 103369295 103369578 -96260572 + L2 LINE L2 1665 1971 -1343 603 284 182 15 chr5 103369599 103369934 -96260216 + Charlie7 DNA MER1_type 24 414 -2198 14699 45 3 0 chr5 103369963 103372536 -96257614 - L1PA5 LINE L1 -4 6150 3566 7190 67 21 0 chr5 103372536 103373524 -96256626 + L1P LINE L1 2331 3339 -2807 1558 149 82 25 chr5 103374415 103374770 -96255380 + THE1C LTR MaLR 1 375 0 248 320 102 28 chr5 103376274 103376668 -96253482 + L1ME4a LINE L1 5605 6027 -94 353 291 116 30 chr5 103377277 103377476 -96252674 + MIR SINE MIR 3 218 -44 1878 209 114 28 chr5 103377498 103377996 -96252154 + MLT1F LTR MaLR 2 542 0 204 40 0 0 chr5 103378132 103378157 -96251993 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1738 146 7 11 chr5 103378157 103378438 -96251712 - AluSx SINE Alu -32 280 1 493 258 71 26 chr5 103378877 103379032 -96251118 + MIR SINE MIR 101 262 0 400 327 0 0 chr5 103379266 103379367 -96250783 + MIR3 SINE MIR 105 205 -3 227 79 26 0 chr5 103379639 103379677 -96250473 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 210 37 0 0 chr5 103379945 103379972 -96250178 + (A)n Simple_repeat Simple_repeat 1 27 0 32 26 0 0 chr5 103383021 103383060 -96247090 + AT_rich Low_complexity Low_complexity 1 39 0 244 306 188 0 chr5 103384793 103384878 -96245272 + MIR3 SINE MIR 72 172 -36 203 250 0 0 chr5 103385490 103385534 -96244616 + L3 LINE CR1 1528 1571 -6 609 268 78 59 chr5 103385617 103386005 -96244145 - MLT1J2 LTR MaLR -3 447 3 908 252 72 31 chr5 103386507 103386856 -96243294 + MLT1G1 LTR MaLR 72 434 -161 246 226 0 0 chr5 103387106 103387159 -96242991 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 183 222 25 99 chr5 103388013 103388094 -96242056 - L3 LINE CR1 -887 690 616 252 0 0 0 chr5 103388267 103388295 -96241855 + (TC)n Simple_repeat Simple_repeat 1 28 0 2269 67 0 3 chr5 103388324 103388640 -96241510 + AluY SINE Alu 1 315 0 315 329 72 29 chr5 103388656 103388863 -96241287 + MLT1J LTR MaLR 99 314 -197 1206 157 20 47 chr5 103388995 103389321 -96240829 + AluY SINE Alu 3 301 0 592 322 46 38 chr5 103389325 103389691 -96240459 + MLT1J LTR MaLR 99 467 -44 266 318 34 0 chr5 103390136 103390224 -96239926 + L2 LINE L2 3182 3272 0 1060 160 34 19 chr5 103390443 103390649 -96239501 + MER3 DNA MER1_type 1 209 0 269 26 26 0 chr5 103390867 103390905 -96239245 + (CA)n Simple_repeat Simple_repeat 2 40 0 2370 173 53 95 chr5 103391208 103391424 -96238726 - L1 LINE L1 -1463 4683 4460 186 43 0 0 chr5 103391424 103391447 -96238703 + (TA)n Simple_repeat Simple_repeat 2 24 0 2155 122 13 0 chr5 103391447 103391750 -96238400 - AluSx SINE Alu -5 307 1 2370 173 53 95 chr5 103391750 103392280 -96237870 - L1 LINE L1 -1684 4462 3967 358 316 0 0 chr5 103392342 103392437 -96237713 + MIR SINE MIR 168 262 0 1197 224 83 68 chr5 103392701 103393003 -96237147 - L1ME2 LINE L1 -1 6163 5850 1836 145 45 0 chr5 103393003 103393292 -96236858 + AluSx SINE Alu 3 304 -8 1197 224 83 68 chr5 103393292 103393485 -96236665 - L1ME2 LINE L1 -314 5850 5661 645 173 55 24 chr5 103393511 103393638 -96236512 - FLAM_A SINE Alu -2 131 1 7329 167 44 57 chr5 103393638 103395300 -96234850 - L1MCa LINE L1 -4764 1662 22 310 169 31 0 chr5 103395303 103395368 -96234782 - L1ME2 LINE L1 -473 5691 5625 936 201 26 5 chr5 103395433 103395622 -96234528 - MLT1A2 LTR MaLR 0 374 182 219 186 0 0 chr5 103395656 103395699 -96234451 + GA-rich Low_complexity Low_complexity 3 45 0 809 229 18 6 chr5 103395718 103395888 -96234262 - MLT1A2 LTR MaLR -202 172 1 1396 200 0 33 chr5 103396099 103396399 -96233751 + MLT1A1 LTR MaLR 1 290 -75 4368 216 24 8 chr5 103396399 103397286 -96232864 - L1M1 LINE L1 -6647 918 18 5947 162 13 3 chr5 103397289 103398884 -96231266 - L1P4 LINE L1 -378 5787 4182 21 0 0 0 chr5 103398903 103398924 -96231226 + AT_rich Low_complexity Low_complexity 1 21 0 1796 226 42 48 chr5 103400098 103400639 -96229511 + MLT1F LTR MaLR 5 542 0 1736 154 90 3 chr5 103401012 103401323 -96228827 + MLT2C1 LTR ERVL 4 341 -56 236 146 36 0 chr5 103401326 103401381 -96228769 + (TG)n Simple_repeat Simple_repeat 2 58 0 230 150 0 0 chr5 103401385 103401425 -96228725 + MLT2C1 LTR ERVL 358 397 0 266 205 39 26 chr5 103401466 103401544 -96228606 + MLT1J LTR MaLR 110 188 -323 2092 130 3 0 chr5 103401549 103401848 -96228302 - AluSx SINE Alu -12 300 1 345 285 32 51 chr5 103401976 103402134 -96228016 - MLT1K LTR MaLR -2 586 432 644 279 37 62 chr5 103402188 103402460 -96227690 - MLT1K LTR MaLR -319 269 5 1579 164 13 52 chr5 103402976 103403281 -96226869 + AluJb SINE Alu 1 293 -19 23 0 0 0 chr5 103403507 103403530 -96226620 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr5 103403676 103403724 -96226426 + AT_rich Low_complexity Low_complexity 1 48 0 2305 83 0 23 chr5 103404153 103404454 -96225696 - AluSg SINE Alu -16 294 1 358 292 42 0 chr5 103404746 103404842 -96225308 + MIR SINE MIR 35 134 -128 1337 231 107 59 chr5 103406648 103407142 -96223008 - MLT2B1 LTR ERVL 0 520 3 2420 234 63 12 chr5 103408913 103409912 -96220238 - L1MC4 LINE L1 -138 7904 6958 195 42 0 0 chr5 103409912 103409936 -96220214 + (CATATA)n Simple_repeat Simple_repeat 5 28 0 8193 124 11 11 chr5 103409939 103411238 -96218912 + HSMAR2 DNA Mariner 2 1299 -3 2420 234 63 12 chr5 103411238 103411319 -96218831 - L1MC4 LINE L1 -1085 6957 6882 1575 196 3 29 chr5 103411319 103411630 -96218520 - AluJb SINE Alu -9 303 1 2420 234 63 12 chr5 103411630 103411719 -96218431 - L1MC4 LINE L1 -1160 6882 6511 985 147 98 4 chr5 103411735 103411960 -96218190 - L1MA8 LINE L1 -1 6290 6045 22 35 0 0 chr5 103411991 103412020 -96218130 + AT_rich Low_complexity Low_complexity 1 29 0 1785 248 38 58 chr5 103412503 103413107 -96217043 + MLT1E LTR MaLR 2 593 0 254 280 11 21 chr5 103413218 103413311 -96216839 + GA-rich Low_complexity Low_complexity 2 93 0 348 278 28 21 chr5 103413386 103413530 -96216620 - L1MC5 LINE L1 -861 7100 6956 609 295 100 8 chr5 103413601 103413852 -96216298 - L1MC4a LINE L1 -977 6831 6558 918 258 59 124 chr5 103413910 103414483 -96215667 - MER77 LTR ERV1 -11 594 111 469 265 14 41 chr5 103414466 103414613 -96215537 - MER77 LTR ERV1 -403 202 60 * 1003 286 51 33 chr5 103414887 103415317 -96214833 - MLT1J1 LTR MaLR -8 438 1 223 281 0 35 chr5 103415549 103415606 -96214544 + L2 LINE L2 3215 3269 -3 1319 73 0 0 chr5 103416253 103416430 -96213720 - L1PA4 LINE L1 0 6155 5979 4375 27 21 0 chr5 103416636 103417159 -96212991 - L1PA4 LINE L1 -3 6152 5619 259 50 0 0 chr5 103417625 103417665 -96212485 - L1MA3 LINE L1 0 6305 6266 561 337 30 10 chr5 103418593 103418795 -96211355 + MIR SINE MIR 47 252 -10 213 255 0 0 chr5 103419474 103419521 -96210629 + L2 LINE L2 3221 3267 -5 1914 111 0 4 chr5 103420030 103420291 -96209859 + AluSq SINE Alu 1 260 -53 692 64 0 11 chr5 103420355 103420449 -96209701 - L1PB2 LINE L1 -41 6110 6018 321 307 93 21 chr5 103420557 103420697 -96209453 + MIR SINE MIR 41 190 -72 264 329 268 9 chr5 103421503 103421716 -96208434 + L2 LINE L2 19 286 -3028 500 268 21 0 chr5 103421790 103421932 -96208218 + LTR65 LTR ERV1 21 165 -504 449 261 33 49 chr5 103422059 103422278 -96207872 + LTR65 LTR ERV1 396 663 -6 4704 264 91 92 chr5 103422285 103423238 -96206912 + L2 LINE L2 286 1238 -2076 2015 161 57 12 chr5 103423238 103423642 -96206508 - L1MB3 LINE L1 -2 6181 5760 4704 264 91 92 chr5 103423642 103424941 -96205209 + L2 LINE L2 1238 2537 -777 780 284 78 44 chr5 103424978 103425299 -96204851 + L2 LINE L2 2982 3313 0 391 301 142 35 chr5 103425433 103425659 -96204491 - MIR SINE MIR -2 260 11 524 208 92 8 chr5 103426543 103426663 -96203487 - FLAM_A SINE Alu -3 130 1 774 180 145 0 chr5 103427297 103427497 -96202653 - L1M4 LINE L1 -3316 2830 2602 1460 201 84 89 chr5 103427498 103427890 -96202260 - MLT1C LTR MaLR 0 390 1 431 189 0 63 chr5 103427921 103428032 -96202118 - L1M4 LINE L1 -3579 2567 2464 366 272 65 5 chr5 103428132 103428316 -96201834 - L1M4 LINE L1 -3692 2454 2260 25 31 0 0 chr5 103428689 103428721 -96201429 + AT_rich Low_complexity Low_complexity 1 32 0 1339 243 84 100 chr5 103431013 103431078 -96199072 - Charlie7 DNA MER1_type 0 2612 2547 1895 146 35 0 chr5 103431078 103431366 -96198784 + AluSx SINE Alu 1 298 -14 1339 243 84 100 chr5 103431366 103432096 -96198054 - Charlie7 DNA MER1_type -65 2547 1841 2147 123 13 0 chr5 103432096 103432398 -96197752 + AluSx SINE Alu 1 306 -6 1339 243 84 100 chr5 103432398 103432806 -96197344 - Charlie7 DNA MER1_type -771 1841 1428 271 239 162 14 chr5 103432914 103433056 -96197094 - Charlie7 DNA MER1_type -2445 167 5 500 332 0 62 chr5 103433070 103433263 -96196887 - MER5A DNA MER1_type -2 187 7 2029 147 39 9 chr5 103434497 103434868 -96195282 + L1MA3 LINE L1 5063 5460 -844 2017 155 14 11 chr5 103434868 103435222 -96194928 + THE1A LTR MaLR 1 355 0 2029 147 39 9 chr5 103435222 103435397 -96194753 + L1MA3 LINE L1 5460 5628 -676 6563 49 134 65 chr5 103435397 103436490 -96193660 - MER11A LTR ERVK 0 1266 1 3849 116 71 2 chr5 103436490 103437122 -96193028 + L1MA3 LINE L1 5623 6298 -7 3232 136 15 8 chr5 103437139 103438227 -96191923 + L1MC1 LINE L1 5188 6332 -1 19100 98 16 25 chr5 103438422 103440757 -96189393 + L1P LINE L1 11 2316 -3830 216 0 0 0 chr5 103440757 103440781 -96189369 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 19100 98 16 25 chr5 103440781 103441303 -96188847 + L1P LINE L1 2316 2841 -3305 306 319 107 6 chr5 103442602 103442771 -96187379 - MIR SINE MIR -40 222 37 1694 161 29 0 chr5 103442913 103443239 -96186911 - AluSx SINE Alu 0 334 1 4793 123 7 3 chr5 103444165 103444891 -96185259 + L1PB3 LINE L1 5423 6151 -3 341 241 106 59 chr5 103444992 103445162 -96184988 - HAL1 LINE L1 -2 2505 2328 1970 153 10 0 chr5 103445172 103445473 -96184677 - AluSx SINE Alu -8 304 1 1490 207 81 54 chr5 103445513 103445992 -96184158 + MLT1D LTR MaLR 6 497 -8 2582 257 106 75 chr5 103446003 103446400 -96183750 - HAL1 LINE L1 -220 2287 1904 198 0 0 0 chr5 103446409 103446431 -96183719 + (TTAAA)n Simple_repeat Simple_repeat 1 22 0 2503 102 16 26 chr5 103446431 103446802 -96183348 - L1PA10 LINE L1 -18 6150 5782 2582 257 106 75 chr5 103446802 103448370 -96181780 - HAL1 LINE L1 -603 1904 260 613 259 13 29 chr5 103448737 103448976 -96181174 - L1ME3A LINE L1 -205 5965 5731 189 226 0 0 chr5 103450528 103450581 -96179569 + T-rich Low_complexity Low_complexity 3 55 0 522 201 64 35 chr5 103452317 103452523 -96177627 - MER58 DNA MER1_type 0 2420 2 21 36 0 0 chr5 103453739 103453767 -96176383 + AT_rich Low_complexity Low_complexity 1 28 0 409 153 34 191 chr5 103453951 103454160 -96175990 + MER104 DNA Tc2 2 177 -3 535 113 245 0 chr5 103454639 103454745 -96175405 + FLAM_C SINE Alu 1 132 -1 189 347 0 53 chr5 103454840 103454915 -96175235 - L2 LINE L2 -260 3012 2942 661 11 0 43 chr5 103454985 103455078 -96175072 + L1PA4 LINE L1 6067 6155 0 198 0 0 0 chr5 103456051 103456073 -96174077 + (TG)n Simple_repeat Simple_repeat 2 23 0 252 339 0 69 chr5 103457698 103457828 -96172322 - MLT1K LTR MaLR -453 135 15 227 229 86 38 chr5 103458614 103458719 -96171431 - L1ME3A LINE L1 0 6170 6061 24 53 0 0 chr5 103459450 103459488 -96170662 + AT_rich Low_complexity Low_complexity 1 38 0 180 286 51 31 chr5 103459504 103459602 -96170548 - L2 LINE L2 -923 2391 2292 682 198 25 13 chr5 103459618 103459775 -96170375 + L1MA8 LINE L1 6129 6287 -4 191 286 0 0 chr5 103460040 103460089 -96170061 - MIR SINE MIR -30 232 184 1337 176 11 22 chr5 103461516 103461783 -96168367 - L1PB4 LINE L1 -2 6154 5891 14699 45 3 0 chr5 103462111 103464687 -96165463 - L1PA5 LINE L1 -8 6146 3566 8591 64 17 0 chr5 103464687 103465851 -96164299 + L1P LINE L1 2331 3514 -2632 297 29 0 0 chr5 103465925 103465959 -96164191 + U2 snRNA snRNA 1 34 -154 22 35 0 0 chr5 103466054 103466083 -96164067 + AT_rich Low_complexity Low_complexity 1 29 0 555 308 106 55 chr5 103466328 103466779 -96163371 - MLT1J LTR MaLR -35 476 3 219 36 0 0 chr5 103467162 103467190 -96162960 + (TTA)n Simple_repeat Simple_repeat 3 30 0 6327 38 5 1 chr5 103467190 103467952 -96162198 - L1PA3 LINE L1 -18 6137 5373 437 54 0 0 chr5 103469672 103469728 -96160422 - L1PA3 LINE L1 -1043 5103 5048 4129 100 25 5 chr5 103470985 103471613 -96158537 - L1MA2 LINE L1 0 6304 5664 21 0 0 0 chr5 103473175 103473196 -96156954 + AT_rich Low_complexity Low_complexity 1 21 0 2395 77 7 0 chr5 103473436 103473734 -96156416 + AluSg SINE Alu 1 300 -10 1264 211 233 28 chr5 103474081 103474525 -96155625 - SATR1 Satellite Satellite -2 534 1 898 185 203 122 chr5 103474548 103474976 -96155174 - SATR1 Satellite Satellite -1 469 7 1244 191 278 13 chr5 103475001 103475755 -96154395 - SATR1 Satellite Satellite -2 954 1 1100 222 198 48 chr5 103475784 103476826 -96153324 - SATR1 Satellite Satellite -2 1198 1 2424 163 115 15 chr5 103476870 103480157 -96149993 - SATR1 Satellite Satellite 0 3616 1 2335 172 118 1 chr5 103480186 103481119 -96149031 - SATR1 Satellite Satellite 0 1042 1 2419 153 119 12 chr5 103481137 103484845 -96145305 - SATR1 Satellite Satellite -3 4103 1 2377 166 138 0 chr5 103484878 103485868 -96144282 - SATR1 Satellite Satellite 0 1126 1 1873 192 126 14 chr5 103485896 103486318 -96143832 - SATR1 Satellite Satellite 0 470 2 2364 165 101 25 chr5 103486343 103488484 -96141666 - SATR1 Satellite Satellite 0 2305 1 2318 176 114 2 chr5 103488511 103489535 -96140615 - SATR1 Satellite Satellite -2 1138 1 2229 177 105 9 chr5 103489568 103490895 -96139255 - SATR1 Satellite Satellite 0 1454 1 2192 175 114 22 chr5 103490923 103491512 -96138638 - SATR1 Satellite Satellite 0 643 1 2422 172 106 3 chr5 103491544 103492795 -96137355 - SATR1 Satellite Satellite 0 1379 1 2421 168 109 22 chr5 103492813 103496300 -96133850 - SATR1 Satellite Satellite 0 3788 1 2603 170 104 15 chr5 103496330 103505242 -96124908 - SATR1 Satellite Satellite 0 9702 1 2422 165 111 4 chr5 103505269 103507567 -96122583 - SATR1 Satellite Satellite 0 2542 1 2443 177 107 4 chr5 103507595 103509454 -96120696 - SATR1 Satellite Satellite -1 2049 1 2328 209 144 74 chr5 103509484 103511007 -96119143 + SATR1 Satellite Satellite 1 2059 -230 2438 88 194 3 chr5 103511007 103511383 -96118767 + LTR7 LTR ERV1 1 448 -2 2328 209 144 74 chr5 103511383 103511583 -96118567 + SATR1 Satellite Satellite 2059 2244 -45 2403 185 140 37 chr5 103511616 103514931 -96115219 + SATR1 Satellite Satellite 1 3657 -3 2377 170 110 16 chr5 103514943 103516496 -96113654 + SATR1 Satellite Satellite 1 1698 -110 5263 183 29 5 chr5 103516496 103517927 -96112223 + L1PA15 LINE L1 4713 6164 -1 2407 282 52 5 chr5 103518613 103518876 -96111274 - L2 LINE L2 -531 2783 2534 2445 77 0 3 chr5 103518876 103519187 -96110963 - AluY SINE Alu -1 310 1 2407 282 52 5 chr5 103519187 103519671 -96110479 - L2 LINE L2 -780 2534 2001 1699 209 14 14 chr5 103519687 103520041 -96110109 - MLT1A1 LTR MaLR -11 354 1 4778 256 81 45 chr5 103520090 103520571 -96109579 - L2 LINE L2 -1491 1823 1361 1678 152 4 0 chr5 103520571 103520839 -96109311 + AluSx SINE Alu 40 308 0 4778 256 81 45 chr5 103520839 103520928 -96109222 - L2 LINE L2 -1953 1361 1277 3152 179 70 2 chr5 103520928 103521454 -96108696 - MER68 LTR ERV1 0 562 1 4778 256 81 45 chr5 103521454 103522606 -96107544 - L2 LINE L2 -2037 1277 36 25 51 0 0 chr5 103522878 103522917 -96107233 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr5 103523170 103523194 -96106956 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 103523612 103523633 -96106517 + AT_rich Low_complexity Low_complexity 1 21 0 445 262 0 10 chr5 103524072 103524175 -96105975 + MIR SINE MIR 41 142 -120 253 226 48 0 chr5 103525556 103525618 -96104532 - Charlie8 DNA MER1_type -1009 1408 1344 387 268 9 73 chr5 103525737 103525941 -96104209 - MIR SINE MIR -41 221 30 180 276 218 0 chr5 103526006 103526093 -96104057 - L2 LINE L2 0 3313 3208 2516 140 3 8 chr5 103526097 103526461 -96103689 - THE1B LTR MaLR 0 364 3 25 65 0 0 chr5 103526900 103526946 -96103204 + AT_rich Low_complexity Low_complexity 1 46 0 1138 232 49 81 chr5 103528316 103528506 -96101644 + MLT1C LTR MaLR 1 196 -271 744 192 8 23 chr5 103528506 103528636 -96101514 + FLAM_A SINE Alu 3 130 -3 1138 232 49 81 chr5 103528636 103528876 -96101274 + MLT1C LTR MaLR 196 417 -50 29 0 0 0 chr5 103530900 103530929 -96099221 + AT_rich Low_complexity Low_complexity 1 29 0 2810 7 0 0 chr5 103530936 103531240 -96098910 + AluY SINE Alu 1 304 -7 232 208 0 19 chr5 103531842 103531895 -96098255 + L2 LINE L2 3262 3313 0 21 71 0 0 chr5 103531905 103531947 -96098203 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr5 103532063 103532088 -96098062 + AT_rich Low_complexity Low_complexity 1 25 0 15631 172 50 11 chr5 103532108 103532453 -96097697 - L1PB1 LINE L1 -3 6864 6534 390 42 0 0 chr5 103532453 103532501 -96097649 + (TG)n Simple_repeat Simple_repeat 2 49 0 15631 172 50 11 chr5 103532501 103533744 -96096406 - L1PB1 LINE L1 -333 6534 5342 181 0 69 0 chr5 103533744 103533773 -96096377 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 15631 172 50 11 chr5 103533773 103538746 -96091404 - L1PB1 LINE L1 -1525 5342 1 234 297 36 43 chr5 103539794 103539932 -96090218 + MIR SINE MIR 72 208 -54 1278 149 67 12 chr5 103540099 103540354 -96089796 - L1PA11 LINE L1 0 6174 5906 518 235 65 71 chr5 103540539 103540761 -96089389 - L1ME4a LINE L1 -237 5884 5663 2156 124 24 0 chr5 103540761 103541091 -96089059 + L1PA15 LINE L1 5819 6156 -9 518 235 65 71 chr5 103541091 103541192 -96088958 - L1ME4a LINE L1 -458 5663 5563 5056 94 15 9 chr5 103541721 103542469 -96087681 + L1MA2 LINE L1 5553 6304 0 256 328 0 0 chr5 103542569 103542636 -96087514 + L2 LINE L2 3244 3310 -3 314 305 23 8 chr5 103542690 103542818 -96087332 + L1ME4a LINE L1 5974 6103 -18 221 56 0 28 chr5 103543538 103543574 -96086576 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1781 208 59 4 chr5 103543682 103544154 -96085996 - L1 LINE L1 -1736 4234 3737 6724 198 35 12 chr5 103544195 103546081 -96084069 + L1PA15-16 LINE L1 1 1715 -5134 2170 122 0 0 chr5 103546081 103546377 -96083773 + AluSx SINE Alu 1 296 -16 6724 198 35 12 chr5 103546377 103546591 -96083559 + L1PA15-16 LINE L1 1715 1923 -4926 8050 201 27 56 chr5 103546594 103548332 -96081818 - L1P4 LINE L1 -439 5722 3935 2147 142 25 0 chr5 103548332 103548686 -96081464 + L1PA13 LINE L1 5796 6163 0 8050 201 27 56 chr5 103548686 103549815 -96080335 - L1P4 LINE L1 -2226 3935 2951 405 0 0 0 chr5 103549815 103549860 -96080290 + (TG)n Simple_repeat Simple_repeat 2 46 0 8050 201 27 56 chr5 103549860 103549997 -96080153 - L1P4 LINE L1 -3210 2951 2812 674 160 0 0 chr5 103549998 103550104 -96080046 - AluSx SINE Alu -13 299 194 1055 113 0 0 chr5 103550105 103550246 -96079904 - AluSx SINE Alu -171 141 1 1117 268 36 34 chr5 103550246 103550717 -96079433 - L1 LINE L1 -3325 2645 2174 1608 196 50 14 chr5 103550733 103551152 -96078998 - L1 LINE L1 -2514 3632 3199 * 2468 265 86 16 chr5 103551151 103552645 -96077505 - L1 LINE L1 -3969 2001 371 1569 301 26 23 chr5 103552662 103553390 -96076760 - L1 LINE L1 -5379 512 10 23 0 0 0 chr5 103554665 103554688 -96075462 + AT_rich Low_complexity Low_complexity 1 23 0 208 278 216 10 chr5 103554947 103555044 -96075106 + MIR SINE MIR 97 213 -49 2503 147 31 5 chr5 103555165 103555580 -96074570 + MSTB LTR MaLR 1 426 0 8180 181 37 41 chr5 103555580 103555935 -96074215 + MSTB-int LTR MaLR 1 356 -1295 2804 22 0 12 chr5 103555935 103556255 -96073895 - AluYb8 SINE Alu -2 316 1 8180 181 37 41 chr5 103556255 103557550 -96072600 + MSTB-int LTR MaLR 356 1645 -6 1332 195 17 0 chr5 103557556 103557797 -96072353 + MSTB LTR MaLR 1 245 -181 462 65 0 78 chr5 103557791 103557868 -96072282 + MSTB LTR MaLR 356 426 0 * 181 260 73 62 chr5 103558365 103558461 -96071689 + MIR SINE MIR 1 97 -165 1838 161 3 16 chr5 103558512 103558823 -96071327 - AluSx SINE Alu -5 307 1 363 297 11 0 chr5 103559188 103559279 -96070871 - MIR SINE MIR -114 148 57 257 294 95 142 chr5 103559496 103559867 -96070283 + L2 LINE L2 2255 2591 -723 392 69 0 0 chr5 103559867 103559925 -96070225 + L1PA6 LINE L1 6096 6153 -1 257 294 95 142 chr5 103559925 103560132 -96070018 + L2 LINE L2 2591 2806 -508 224 352 83 37 chr5 103560423 103560531 -96069619 + L2 LINE L2 3141 3253 -19 263 323 30 53 chr5 103560674 103560807 -96069343 + MIR SINE MIR 77 206 -56 331 213 0 13 chr5 103560964 103561039 -96069111 + L2 LINE L2 3189 3262 -51 29 28 0 0 chr5 103561249 103561285 -96068865 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr5 103561353 103561388 -96068762 + AT_rich Low_complexity Low_complexity 1 35 0 357 100 71 14 chr5 103561539 103561609 -96068541 - L1MA8 LINE L1 -354 5937 5864 * 770 218 69 11 chr5 103561598 103561786 -96068364 + L1MA9 LINE L1 6062 6260 -52 197 32 0 32 chr5 103561786 103561817 -96068333 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 202 230 40 81 chr5 103562865 103562939 -96067211 - L2 LINE L2 -18 3254 3184 51 31 0 0 chr5 103563425 103563490 -96066660 + AT_rich Low_complexity Low_complexity 1 65 0 303 271 135 15 chr5 103563582 103563715 -96066435 - MIR SINE MIR -14 248 100 402 113 0 0 chr5 103563715 103563777 -96066373 - AluSp/q SINE Alu -18 295 234 214 333 13 26 chr5 103563777 103563855 -96066295 - MIR SINE MIR -149 113 37 39 0 0 0 chr5 103565138 103565177 -96064973 + AT_rich Low_complexity Low_complexity 1 39 0 1114 142 0 0 chr5 103566041 103566196 -96063954 - FRAM SINE Alu -25 151 1 369 242 38 23 chr5 103566259 103566391 -96063759 + MER94 DNA DNA 1 134 0 600 233 18 43 chr5 103566504 103566667 -96063483 + MLT1F1 LTR MaLR 1 159 -434 886 240 82 19 chr5 103566912 103567179 -96062971 + MLT1F1 LTR MaLR 284 567 0 311 279 74 58 chr5 103567227 103567592 -96062558 - L1M4 LINE L1 -1830 4316 3946 29 70 0 0 chr5 103567669 103567726 -96062424 + AT_rich Low_complexity Low_complexity 1 57 0 2154 134 0 0 chr5 103568426 103568733 -96061417 + AluSx SINE Alu 1 307 -5 2438 81 0 0 chr5 103569078 103569386 -96060764 + AluSq SINE Alu 1 308 -5 21 36 0 0 chr5 103570667 103570695 -96059455 + AT_rich Low_complexity Low_complexity 1 28 0 219 43 43 22 chr5 103571100 103571146 -96059004 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 7509 25 1 1 chr5 103571151 103572032 -96058118 - L1PA3 LINE L1 -21 6134 5254 27 29 0 0 chr5 103572426 103572460 -96057690 + AT_rich Low_complexity Low_complexity 1 34 0 323 336 35 14 chr5 103572460 103572603 -96057547 + MIR3 SINE MIR 42 187 -21 415 290 95 35 chr5 103572819 103573019 -96057131 + MIR SINE MIR 8 219 -43 235 316 68 51 chr5 103573658 103573835 -96056315 - MLT1J2 LTR MaLR -8 442 263 185 220 34 102 chr5 103575298 103575357 -96054793 - L2 LINE L2 -34 3279 3225 28 0 0 0 chr5 103576067 103576095 -96054055 + AT_rich Low_complexity Low_complexity 1 28 0 221 339 0 0 chr5 103576552 103576611 -96053539 + polypurine Low_complexity Low_complexity 3 61 0 225 196 0 0 chr5 103576640 103576691 -96053459 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 306 0 0 0 chr5 103576844 103576878 -96053272 + (CA)n Simple_repeat Simple_repeat 1 34 0 1201 232 0 12 chr5 103577121 103577367 -96052783 - AluJo SINE Alu -59 253 11 2073 237 37 2 chr5 103577379 103577889 -96052261 + L1 LINE L1 2555 3082 -3064 2182 59 0 0 chr5 103577890 103578163 -96051987 - L1P LINE L1 -1154 4992 4720 2295 59 0 0 chr5 103578163 103578468 -96051682 + L1P LINE L1 5000 5304 -842 * 6892 32 0 16 chr5 103578465 103579335 -96050815 - L1PA3 LINE L1 -71 6084 5229 258 0 0 0 chr5 103579331 103579366 -96050784 + L1PA3 LINE L1 6118 6152 -3 * 27 0 0 0 chr5 103579366 103579393 -96050757 + AT_rich Low_complexity Low_complexity 1 27 0 1194 99 58 5 chr5 103579419 103579610 -96050540 + L1PB1 LINE L1 5950 6150 -1 1030 167 35 53 chr5 103579629 103579883 -96050267 + L1MB8 LINE L1 5934 6334 0 7071 40 2 0 chr5 103579888 103580747 -96049403 + L1PA5 LINE L1 5293 6153 -1 324 152 30 0 chr5 103580741 103580807 -96049343 + L1M LINE L1 5272 5339 -2446 6349 152 81 152 chr5 103580813 103582048 -96048102 + L1 LINE L1 3073 4366 -1780 1183 232 63 4 chr5 103582048 103582202 -96047948 - AluJo SINE Alu -21 291 115 261 0 0 0 chr5 103582202 103582231 -96047919 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1183 232 63 4 chr5 103582231 103582330 -96047820 - AluJo SINE Alu -197 115 23 6349 152 81 152 chr5 103582330 103582973 -96047177 + L1 LINE L1 4366 5053 -1093 1714 131 0 7 chr5 103633759 103634034 -95996116 - L1PB1 LINE L1 -3 6148 5876 264 307 39 31 chr5 103635995 103636122 -95994028 + L2 LINE L2 2112 2239 -1075 680 292 90 82 chr5 103636658 103637024 -95993126 + LTR16A LTR ERVL 68 436 -14 186 292 0 21 chr5 103637100 103637148 -95993002 - L2 LINE L2 -87 3185 3139 29 0 0 0 chr5 103637689 103637718 -95992432 + AT_rich Low_complexity Low_complexity 1 29 0 526 340 47 0 chr5 103637718 103637909 -95992241 + L2 LINE L2 2552 2751 -563 26 0 0 0 chr5 103637922 103637948 -95992202 + AT_rich Low_complexity Low_complexity 1 26 0 563 291 49 45 chr5 103638553 103638797 -95991353 + HERVL LTR ERVL 5210 5454 -200 12021 27 1 15 chr5 103639465 103641711 -95988439 - L1PA2 LINE L1 -1 6154 3929 31 76 0 0 chr5 103641999 103642065 -95988085 + AT_rich Low_complexity Low_complexity 1 66 0 1677 88 5 0 chr5 103642176 103642392 -95987758 + AluY SINE Alu 66 282 -29 31 26 0 0 chr5 103642888 103642926 -95987224 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 103643288 103643318 -95986832 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 103643424 103643446 -95986704 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr5 103643500 103643529 -95986621 + AT_rich Low_complexity Low_complexity 1 29 0 2176 82 10 10 chr5 103646098 103646391 -95983759 + AluY SINE Alu 1 293 -18 22 0 0 0 chr5 103647691 103647713 -95982437 + AT_rich Low_complexity Low_complexity 1 22 0 294 194 0 0 chr5 103647997 103648064 -95982086 + (CA)n Simple_repeat Simple_repeat 1 67 0 396 111 0 0 chr5 103648162 103648225 -95981925 + (CA)n Simple_repeat Simple_repeat 1 63 0 2136 176 39 7 chr5 103649107 103649522 -95980628 - MSTA LTR MaLR 0 428 1 4358 182 1 8 chr5 103649522 103650292 -95979858 - MSTA-int LTR MaLR 0 1580 816 2149 138 46 42 chr5 103650293 103650710 -95979440 - MSTA LTR MaLR -11 417 1 226 260 40 32 chr5 103650901 103651066 -95979084 + T-rich Low_complexity Low_complexity 1 166 0 34 55 0 0 chr5 103651900 103651955 -95978195 + AT_rich Low_complexity Low_complexity 1 55 0 605 359 121 12 chr5 103651959 103652388 -95977762 + L2 LINE L2 2838 3313 0 26 0 0 0 chr5 103652483 103652509 -95977641 + AT_rich Low_complexity Low_complexity 1 26 0 229 191 15 29 chr5 103652674 103652742 -95977408 + A-rich Low_complexity Low_complexity 2 68 0 757 198 6 6 chr5 103653086 103653248 -95976902 - L1P LINE L1 -1013 5133 4972 634 114 0 0 chr5 103653250 103653338 -95976812 + HUERS-P2 LTR ERV1 2997 3084 -4 597 161 0 18 chr5 103653341 103653453 -95976697 + LTR1 LTR ERV1 1 110 -675 498 244 65 16 chr5 103653680 103653941 -95976209 + L1MA10 LINE L1 5894 6334 0 220 235 0 51 chr5 103653950 103654048 -95976102 + A-rich Low_complexity Low_complexity 2 94 0 1215 252 14 39 chr5 103654573 103654989 -95975161 - L1MDa LINE L1 -4501 2039 1634 198 330 57 45 chr5 103655958 103656046 -95974104 - L2 LINE L2 -2 3311 3223 288 205 39 0 chr5 103656446 103656524 -95973626 - LTR37A LTR ERV1 -19 407 327 6232 209 46 78 chr5 103656585 103658397 -95971753 - MER52A LTR ERV1 0 1755 1 889 236 0 0 chr5 103658562 103658740 -95971410 - AluJb SINE Alu -1 311 134 640 234 159 4 chr5 103658740 103658967 -95971183 - LTR37B LTR ERV1 -4 464 203 2634 16 3 3 chr5 103659622 103659933 -95970217 - L1PA3 LINE L1 0 6155 5845 2772 11 0 3 chr5 103659933 103660434 -95969716 + L1P1 LINE L1 5079 5578 -577 1974 85 99 0 chr5 103661680 103661962 -95968188 - AluY SINE Alu -1 310 1 2023 119 7 3 chr5 103664109 103664403 -95965747 + AluSc SINE Alu 1 295 -14 403 255 35 0 chr5 103664418 103664559 -95965591 + L1MEc LINE L1 1864 2009 -4387 262 302 31 10 chr5 103664558 103664654 -95965496 + L1M4 LINE L1 4015 4112 -2034 * 1903 191 65 31 chr5 103664681 103665095 -95965055 - MSTA LTR MaLR 0 428 1 306 335 159 26 chr5 103665435 103665662 -95964488 + L1MEd LINE L1 417 673 -5446 27 49 0 0 chr5 103666552 103666593 -95963557 + AT_rich Low_complexity Low_complexity 1 41 0 4567 177 76 20 chr5 103666876 103667962 -95962188 - L1MC1 LINE L1 0 6333 5188 243 217 0 0 chr5 103668354 103668414 -95961736 + (TA)n Simple_repeat Simple_repeat 1 60 0 2016 83 3 45 chr5 103668883 103669195 -95960955 + AluSg SINE Alu 2 300 -10 375 340 91 26 chr5 103669317 103669582 -95960568 + L2 LINE L2 3027 3308 -5 614 98 0 0 chr5 103669723 103669815 -95960335 - L1PA6 LINE L1 -1 6153 6062 1033 253 53 24 chr5 103671535 103671915 -95958235 - L1ME3 LINE L1 -94 6068 5678 643 260 61 11 chr5 103671947 103672128 -95958022 + MIR SINE MIR 2 191 -71 8637 158 13 34 chr5 103673258 103674837 -95955313 - Tigger2 DNA MER2_type -14 2704 1159 1369 223 40 38 chr5 103674945 103675340 -95954810 - Tigger2 DNA MER2_type -2322 396 1 1180 191 122 7 chr5 103676477 103676771 -95953379 + L1MC/D LINE L1 5282 5609 -735 497 124 0 11 chr5 103677028 103677117 -95953033 + (TTCC)n Simple_repeat Simple_repeat 3 90 0 280 219 47 0 chr5 103677261 103677325 -95952825 - L1MA1 LINE L1 -1 6301 6235 643 325 41 19 chr5 103677325 103677737 -95952413 - L1ME3 LINE L1 -2071 5737 5317 242 260 0 0 chr5 103678367 103678417 -95951733 - L2 LINE L2 -1 3271 3222 * 263 192 244 26 chr5 103678415 103678493 -95951657 - MIR SINE MIR -60 148 54 227 232 0 0 chr5 103678887 103678943 -95951207 + L1MC4 LINE L1 6647 6702 -1340 207 0 0 0 chr5 103678962 103678985 -95951165 + (GA)n Simple_repeat Simple_repeat 2 24 0 26 98 0 0 chr5 103679492 103679574 -95950576 + AT_rich Low_complexity Low_complexity 1 82 0 436 86 0 0 chr5 103680223 103680281 -95949869 - L1PA3 LINE L1 -2900 3246 3189 17382 39 0 2 chr5 103680281 103683200 -95946950 + L1PA3 LINE L1 3240 6154 -1 1260 156 11 151 chr5 103683781 103684139 -95946011 - Tigger2 DNA MER2_type 0 2718 2411 300 260 60 0 chr5 103684239 103684339 -95945811 + L1MD3 LINE L1 6789 6894 -1101 691 239 21 16 chr5 103684344 103684532 -95945618 + L1MD3 LINE L1 7092 7280 -715 431 212 0 12 chr5 103684564 103684649 -95945501 + MLT1F1 LTR MaLR 42 125 -442 1417 209 49 136 chr5 103684649 103684835 -95945315 + L1MD3 LINE L1 7404 7605 -390 1786 179 0 0 chr5 103684835 103685143 -95945007 + AluJb SINE Alu 1 308 -4 1417 209 49 136 chr5 103685143 103685594 -95944556 + L1MD3 LINE L1 7605 7985 -10 21 0 0 0 chr5 103685671 103685692 -95944458 + AT_rich Low_complexity Low_complexity 1 21 0 1893 269 26 17 chr5 103687464 103688114 -95942036 - L1MEc LINE L1 -3229 3712 3057 932 291 80 12 chr5 103688133 103688662 -95941488 - L1MEc LINE L1 -3856 3085 2560 286 278 66 73 chr5 103688669 103688971 -95941179 - L1MEc LINE L1 -6103 320 21 570 15 0 0 chr5 103689110 103689177 -95940973 + (CA)n Simple_repeat Simple_repeat 2 68 0 1740 138 46 87 chr5 103689275 103689666 -95940484 - THE1C LTR MaLR 0 375 1 257 259 0 62 chr5 103690038 103690119 -95940031 - MLT1L LTR MaLR -304 311 236 21 0 0 0 chr5 103690481 103690502 -95939648 + AT_rich Low_complexity Low_complexity 1 21 0 813 303 92 20 chr5 103691436 103691836 -95938314 - ERVL LTR ERVL -709 5055 4627 1822 323 53 26 chr5 103691915 103693020 -95937130 - ERVL LTR ERVL -1092 4393 3236 1290 298 95 29 chr5 103693382 103693969 -95936181 + MLT1E2 LTR MaLR 1 626 0 298 295 26 73 chr5 103694013 103694074 -95936076 - MLT1H LTR MaLR -280 269 207 1082 203 17 17 chr5 103694074 103694310 -95935840 - MER46A DNA MER2_type 0 236 1 298 295 26 73 chr5 103694310 103694482 -95935668 - MLT1H LTR MaLR -342 207 47 1257 201 8 25 chr5 103694763 103695007 -95935143 - MER74C LTR ERVL 0 460 221 1332 220 25 52 chr5 103695081 103695449 -95934701 + MLT1A1 LTR MaLR 8 365 0 551 338 35 56 chr5 103696036 103696462 -95933688 + MLT1K LTR MaLR 143 559 -29 24 32 0 0 chr5 103697033 103697064 -95933086 + AT_rich Low_complexity Low_complexity 1 31 0 1559 194 21 4 chr5 103697445 103697724 -95932426 - AluJo SINE Alu -26 286 3 184 282 136 0 chr5 103699129 103699239 -95930911 + MIR SINE MIR 97 221 -41 287 353 7 65 chr5 103699269 103699422 -95930728 + MIR SINE MIR 18 161 -101 582 256 8 8 chr5 103700873 103700998 -95929152 + MER8 DNA MER2_type 6 130 -109 352 239 0 0 chr5 103700992 103701063 -95929087 - Tigger2 DNA MER2_type -2644 74 4 * 24 77 0 0 chr5 103701714 103701766 -95928384 + AT_rich Low_complexity Low_complexity 1 52 0 239 288 99 18 chr5 103703541 103703652 -95926498 - MIR SINE MIR -17 245 126 865 223 135 9 chr5 103703814 103703963 -95926187 - AluJo SINE Alu -20 292 103 306 67 0 0 chr5 103703963 103704008 -95926142 + (TG)n Simple_repeat Simple_repeat 2 46 0 865 223 135 9 chr5 103704008 103704087 -95926063 - AluJo SINE Alu -209 103 35 746 293 96 18 chr5 103704167 103704730 -95925420 - L1M4 LINE L1 -1578 4568 3962 258 286 13 13 chr5 103704734 103704811 -95925339 - MLT2F LTR ERVL -553 110 34 243 308 68 45 chr5 103704841 103704974 -95925176 + L2 LINE L2 3137 3272 0 544 256 137 19 chr5 103705796 103706058 -95924092 - LTR50 LTR ERVL 0 795 503 401 248 55 9 chr5 103706135 103706244 -95923906 - LTR50 LTR ERVL -681 114 1 27 0 0 0 chr5 103706277 103706304 -95923846 + AT_rich Low_complexity Low_complexity 1 27 0 342 282 52 60 chr5 103706429 103706681 -95923469 - L1ME4a LINE L1 -233 5888 5639 1092 162 86 0 chr5 103707126 103707360 -95922790 + Tigger2 DNA MER2_type 1 254 -2464 * 4734 166 30 7 chr5 103707359 103708222 -95921928 + Tigger2 DNA MER2_type 1560 2442 -276 23 54 0 0 chr5 103709430 103709467 -95920683 + AT_rich Low_complexity Low_complexity 1 37 0 26 0 0 0 chr5 103709631 103709657 -95920493 + AT_rich Low_complexity Low_complexity 1 26 0 712 181 0 15 chr5 103710105 103710238 -95919912 - FLAM_C SINE Alu 0 133 3 28 0 0 0 chr5 103710468 103710496 -95919654 + AT_rich Low_complexity Low_complexity 1 28 0 27 81 0 0 chr5 103710542 103710604 -95919546 + AT_rich Low_complexity Low_complexity 1 62 0 24 32 0 0 chr5 103710702 103710733 -95919417 + AT_rich Low_complexity Low_complexity 1 31 0 334 294 68 68 chr5 103710760 103711070 -95919080 - L1MC4a LINE L1 -1906 5902 5593 1363 198 99 0 chr5 103711369 103711723 -95918427 - Charlie5 DNA MER1_type 0 2624 2236 517 143 98 0 chr5 103711725 103711837 -95918313 - Charlie5 DNA MER1_type -2488 124 2 2251 63 0 10 chr5 103713534 103713835 -95916315 + AluY SINE Alu 1 298 -13 2059 111 95 50 chr5 103715178 103715600 -95914550 - MSTA LTR MaLR -8 375 1 599 215 0 30 chr5 103715608 103715743 -95914407 + MER92C LTR ERV1 255 385 -169 562 221 50 43 chr5 103715903 103716043 -95914107 + MER92C LTR ERV1 411 551 -3 1572 191 27 3 chr5 103716240 103716570 -95913580 + L1MA3 LINE L1 5966 6303 -2 238 188 16 16 chr5 103717380 103717444 -95912706 + L1MD3 LINE L1 7803 7866 -129 31 0 0 0 chr5 103717910 103717941 -95912209 + AT_rich Low_complexity Low_complexity 1 31 0 266 326 43 28 chr5 103718272 103718413 -95911737 + L1ME LINE L1 462 604 -5926 502 247 57 59 chr5 103719264 103719643 -95910507 + L1ME LINE L1 1021 1406 -5134 2797 157 10 10 chr5 103719657 103720140 -95910010 + L1PA16 LINE L1 5558 6040 -126 2287 49 3 29 chr5 103720140 103720448 -95909702 + AluY SINE Alu 1 300 -11 261 0 0 0 chr5 103720548 103720577 -95909573 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 390 206 0 82 chr5 103720625 103720722 -95909428 + MSTD LTR MaLR 235 323 -73 207 0 0 0 chr5 103721035 103721058 -95909092 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3333 135 20 2 chr5 103721645 103722340 -95907810 + L1MA9 LINE L1 5225 5950 -220 2121 197 11 11 chr5 103722337 103722789 -95907361 + L1P LINE L1 4842 5293 -853 * 3397 235 54 15 chr5 103722773 103724308 -95905842 + L1MB7 LINE L1 4593 6184 0 388 279 112 84 chr5 103724330 103724864 -95905286 - MLT1H LTR MaLR 0 549 1 30 0 0 0 chr5 103725045 103725075 -95905075 + AT_rich Low_complexity Low_complexity 1 30 0 24 53 0 0 chr5 103725303 103725341 -95904809 + AT_rich Low_complexity Low_complexity 1 38 0 2713 264 76 23 chr5 103726228 103727176 -95902974 + L1MCb LINE L1 1 998 -5047 263 174 22 0 chr5 103727181 103727227 -95902923 + AluS SINE Alu 15 61 -242 268 299 51 17 chr5 103727228 103727345 -95902805 + L1ME3A LINE L1 5526 5646 -524 508 284 131 36 chr5 103727422 103727757 -95902393 + L1ME3A LINE L1 5782 6148 -22 2148 125 0 0 chr5 103728003 103728299 -95901851 + AluSc SINE Alu 1 296 -13 830 252 141 28 chr5 103728398 103728458 -95901692 - MER58B DNA MER1_type -2079 341 289 2423 124 8 3 chr5 103728458 103728820 -95901330 + THE1B LTR MaLR 1 364 0 830 252 141 28 chr5 103728820 103729049 -95901101 - MER58B DNA MER1_type -2131 289 19 3126 32 3 0 chr5 103729199 103729576 -95900574 - L1PA3 LINE L1 -8 6147 5770 1724 19 14 5 chr5 103729576 103729787 -95900363 - L1PA2 LINE L1 -2 6153 5939 32806 26 0 0 chr5 103729887 103734896 -95895254 - L1PA2 LINE L1 -180 5975 967 5715 60 5 9 chr5 103734898 103735670 -95894480 - L1PA2 LINE L1 -5370 776 8 5372 22 0 0 chr5 103735672 103736712 -95893438 - L1P1 LINE L1 -368 5787 4748 422 279 9 0 chr5 103738643 103738754 -95891396 - MIR SINE MIR -86 176 65 4504 204 31 37 chr5 103738878 103741058 -95889092 - L1MA10 LINE L1 -5 6329 4161 1390 219 13 54 chr5 103741054 103741442 -95888708 + L1 LINE L1 3746 4117 -2029 * 25 0 0 0 chr5 103742028 103742053 -95888097 + AT_rich Low_complexity Low_complexity 1 25 0 4536 51 18 2 chr5 103742141 103742746 -95887404 - L1PA3 LINE L1 0 6155 5541 27 29 0 0 chr5 103743192 103743226 -95886924 + AT_rich Low_complexity Low_complexity 1 34 0 404 326 103 29 chr5 103743432 103743916 -95886234 + Tigger8 DNA MER2_type 37 556 -110 1663 152 37 0 chr5 103744385 103744682 -95885468 - L1M1 LINE L1 -739 5561 5254 3214 146 33 2 chr5 103744707 103745290 -95884860 + L1MA4 LINE L1 5696 6296 -4 384 136 0 12 chr5 103745311 103745392 -95884758 + L1M2 LINE L1 5352 5431 -860 482 129 12 0 chr5 103746311 103746396 -95883754 + L1PA16 LINE L1 6072 6157 -9 423 352 59 18 chr5 103746673 103747055 -95883095 + HERV16 LTR ERVL 3144 3466 -1530 1093 241 15 33 chr5 103747132 103747402 -95882748 + MLT1B LTR MaLR 1 265 -125 24 0 0 0 chr5 103747759 103747783 -95882367 + AT_rich Low_complexity Low_complexity 1 24 0 203 313 55 55 chr5 103749340 103749468 -95880682 - L3 LINE CR1 -157 1420 1293 353 267 0 0 chr5 103750049 103750124 -95880026 - L2 LINE L2 -11 3302 3228 466 271 36 5 chr5 103750263 103750484 -95879666 + L1ME3 LINE L1 4367 4594 -1552 709 191 27 21 chr5 103750788 103750976 -95879174 + MER53 DNA DNA 1 189 0 889 266 153 26 chr5 103750977 103751446 -95878704 + L1ME3 LINE L1 5634 6162 0 21 89 0 0 chr5 103751591 103751647 -95878503 + AT_rich Low_complexity Low_complexity 1 56 0 345 198 37 0 chr5 103751866 103751947 -95878203 - L1 LINE L1 -1659 5906 5823 4828 184 43 21 chr5 103751952 103753619 -95876531 - L1 LINE L1 -2814 4751 3043 2102 314 66 40 chr5 103753618 103755105 -95875045 - L1PA12 LINE L1 -5501 2080 546 * 1307 271 32 15 chr5 103755154 103755560 -95874590 - L1PA12 LINE L1 -7166 415 3 2723 249 52 57 chr5 103755588 103756871 -95873279 - L1M4 LINE L1 -1896 4250 2974 4778 47 3 0 chr5 103756941 103757522 -95872628 - L1PA5 LINE L1 -2 6152 5570 3122 36 1 0 chr5 103757522 103758080 -95872070 + L1PA5 LINE L1 5008 5566 -588 605 272 56 0 chr5 103758937 103759117 -95871033 - MER63A DNA MER1_type -20 190 1 2833 140 5 5 chr5 103759947 103760396 -95869754 - L1PA16 LINE L1 -9 6157 5709 3515 263 143 47 chr5 103760600 103761755 -95868395 + L1MC3 LINE L1 5708 6751 -1034 198 0 0 0 chr5 103761755 103761777 -95868373 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 3515 263 143 47 chr5 103761777 103761899 -95868251 + L1MC3 LINE L1 6751 6860 -925 370 158 0 0 chr5 103761899 103761956 -95868194 + MLT1F1 LTR MaLR 46 102 -465 3515 263 143 47 chr5 103761956 103762502 -95867648 + L1MC3 LINE L1 6860 7768 -17 324 96 78 0 chr5 103763731 103763846 -95866304 + (TA)n Simple_repeat Simple_repeat 1 124 0 24 0 0 0 chr5 103763927 103763951 -95866199 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 103763977 103764006 -95866144 + AT_rich Low_complexity Low_complexity 1 29 0 3551 211 45 57 chr5 103764078 103765054 -95865096 + MER45B DNA AcHobo 73 1036 -4 471 307 61 6 chr5 103765133 103765296 -95864854 + MIR SINE MIR 1 172 -90 209 401 30 0 chr5 103765705 103765837 -95864313 + L3 LINE CR1 1382 1517 -60 3705 165 11 19 chr5 103766385 103767130 -95863020 - L1MA4 LINE L1 -1118 5028 4290 * 4276 184 83 32 chr5 103767121 103767742 -95862408 + L1MA4 LINE L1 5020 5608 -692 2419 93 0 0 chr5 103767742 103768053 -95862097 + AluY SINE Alu 1 311 0 4276 184 83 32 chr5 103768053 103768385 -95861765 + L1MA4 LINE L1 5608 5922 -378 1727 161 91 24 chr5 103768385 103768726 -95861424 + THE1B LTR MaLR 1 364 0 11145 95 22 2 chr5 103768726 103770275 -95859875 + THE1B-int LTR MaLR 1 1580 0 1814 149 92 21 chr5 103770275 103770611 -95859539 + THE1B LTR MaLR 1 360 -4 4276 184 83 32 chr5 103770611 103770879 -95859271 + L1MA4 LINE L1 5921 6293 -7 431 51 0 11 chr5 103771696 103771761 -95858389 - MLT2A1 LTR ERVL 0 444 392 213 182 0 0 chr5 103771761 103771816 -95858334 + (TA)n Simple_repeat Simple_repeat 2 56 0 2704 98 11 0 chr5 103771816 103772182 -95857968 - MLT2A1 LTR ERVL -40 404 35 399 73 0 0 chr5 103772183 103772238 -95857912 - HERVL LTR ERVL -838 4816 4762 24 32 0 0 chr5 103772252 103772283 -95857867 + AT_rich Low_complexity Low_complexity 1 31 0 30 58 0 14 chr5 103772399 103772437 -95857713 + AT_rich Low_complexity Low_complexity 1 39 -29 2151 111 3 0 chr5 103772437 103772725 -95857425 - AluSp SINE Alu -24 289 1 30 58 0 14 chr5 103772725 103772755 -95857395 + AT_rich Low_complexity Low_complexity 39 68 0 2596 208 18 55 chr5 103773392 103773960 -95856190 - MLT2B3 LTR ERVL 0 554 8 1368 175 100 63 chr5 103774110 103774459 -95855691 + MLT1A1 LTR MaLR 4 365 0 22 0 0 0 chr5 103775702 103775724 -95854426 + AT_rich Low_complexity Low_complexity 1 22 0 264 196 4 0 chr5 103776279 103776348 -95853802 - Alu SINE Alu -3 299 238 21 36 0 0 chr5 103777068 103777096 -95853054 + AT_rich Low_complexity Low_complexity 1 28 0 900 296 56 32 chr5 103777256 103777753 -95852397 - L1M4 LINE L1 -1943 4203 3695 255 167 0 0 chr5 103778249 103778285 -95851865 + L1MEd LINE L1 594 629 -5490 434 113 0 0 chr5 103778829 103778891 -95851259 + MSTB2 LTR MaLR 3 64 -393 1847 168 126 11 chr5 103778894 103779274 -95850876 + MSTA LTR MaLR 5 428 0 8330 159 8 72 chr5 103779276 103779828 -95850322 + MSTA-int LTR MaLR 3 589 -991 183 42 0 0 chr5 103779828 103779852 -95850298 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8330 159 8 72 chr5 103779852 103780985 -95849165 + MSTA-int LTR MaLR 589 1580 0 593 167 246 36 chr5 103780985 103781123 -95849027 + MSTA LTR MaLR 1 167 -197 648 160 160 0 chr5 103781125 103781256 -95848894 + MSTA LTR MaLR 277 428 0 1544 220 103 19 chr5 103781256 103781624 -95848526 + MSTB2 LTR MaLR 59 457 0 304 267 102 59 chr5 103781819 103782387 -95847763 + L1ME3A LINE L1 5530 6165 -5 1259 222 7 42 chr5 103782451 103782757 -95847393 + AluJo SINE Alu 3 297 -15 21 36 0 0 chr5 103782870 103782898 -95847252 + AT_rich Low_complexity Low_complexity 1 28 0 4435 180 75 16 chr5 103782934 103783930 -95846220 + L1MC1 LINE L1 5273 6322 -11 271 194 119 0 chr5 103784616 103784683 -95845467 + MER21A LTR ERV1 179 253 -678 2726 164 48 40 chr5 103784706 103785231 -95844919 + MER21A LTR ERV1 384 915 -16 2395 142 5 3 chr5 103785231 103785605 -95844545 - THE1C LTR MaLR 0 375 1 2726 164 48 40 chr5 103785605 103785623 -95844527 + MER21A LTR ERV1 915 931 0 666 234 135 42 chr5 103786003 103786418 -95843732 - MLT1D LTR MaLR 0 467 23 322 302 29 110 chr5 103786530 103786838 -95843312 - L1ME LINE L1 -5603 467 185 208 259 0 26 chr5 103786838 103786954 -95843196 + GA-rich Low_complexity Low_complexity 1 113 0 250 315 27 9 chr5 103786954 103787065 -95843085 - L1ME LINE L1 -5868 202 90 21 0 0 0 chr5 103788452 103788473 -95841677 + AT_rich Low_complexity Low_complexity 1 21 0 47 74 0 8 chr5 103788885 103788970 -95841180 + AT_rich Low_complexity Low_complexity 1 86 -34 2239 73 0 10 chr5 103788970 103789258 -95840892 + AluY SINE Alu 1 285 -26 47 74 0 8 chr5 103789258 103789293 -95840857 + AT_rich Low_complexity Low_complexity 86 120 0 1162 258 35 0 chr5 103789358 103789614 -95840536 + Tigger7 DNA MER2_type 3 267 -466 555 170 10 40 chr5 103789613 103789713 -95840437 + Tigger7 DNA MER2_type 2490 2586 -1 * 368 281 55 37 chr5 103790053 103790217 -95839933 + MLT1E LTR MaLR 72 238 -355 1089 143 63 0 chr5 103790242 103790277 -95839873 + AluSg/x SINE Alu 87 118 -194 337 65 16 16 chr5 103790277 103790339 -95839811 + (CAAAA)n Simple_repeat Simple_repeat 5 66 0 1089 143 63 0 chr5 103790339 103790492 -95839658 + AluSg/x SINE Alu 118 287 -25 2215 65 48 0 chr5 103790616 103790908 -95839242 - AluY SINE Alu -5 306 1 21 36 0 0 chr5 103791044 103791072 -95839078 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 103792179 103792209 -95837941 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5 103792554 103792582 -95837568 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 103792784 103792805 -95837345 + AT_rich Low_complexity Low_complexity 1 21 0 267 233 20 0 chr5 103792937 103793044 -95837106 + AluJ/FRAM SINE Alu 225 323 0 858 223 91 18 chr5 103793288 103793508 -95836642 - Charlie1a DNA MER1_type -1215 240 5 23 33 0 0 chr5 103793720 103793750 -95836400 + AT_rich Low_complexity Low_complexity 1 30 0 539 280 40 53 chr5 103793819 103794044 -95836106 + MIR SINE MIR 14 235 -27 2513 190 65 56 chr5 103795000 103795646 -95834504 - MER67C LTR ERV1 0 710 59 300 203 0 14 chr5 103797223 103797292 -95832858 - L1MC5 LINE L1 -198 7763 7696 215 358 101 0 chr5 103798409 103798518 -95831632 + L2 LINE L2 3190 3309 -4 22 35 0 0 chr5 103799454 103799483 -95830667 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 103799656 103799677 -95830473 + AT_rich Low_complexity Low_complexity 1 21 0 3694 135 132 1 chr5 103799677 103800344 -95829806 - L1PA15 LINE L1 -7 6158 5405 726 192 32 5 chr5 103800358 103800512 -95829638 - MER61D LTR ERV1 -26 475 338 1358 176 4 7 chr5 103800987 103801259 -95828891 - L1PA15 LINE L1 -746 5400 5130 308 134 30 15 chr5 103801256 103801323 -95828827 - L1 LINE L1 -2385 3761 3694 * 344 294 209 7 chr5 103801408 103801561 -95828589 - MIR SINE MIR -69 193 10 21 36 0 0 chr5 103803429 103803457 -95826693 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 103803480 103803506 -95826644 + AT_rich Low_complexity Low_complexity 1 26 0 543 83 21 10 chr5 103804238 103804334 -95825816 + (GAAA)n Simple_repeat Simple_repeat 2 98 0 23 0 0 0 chr5 103804691 103804714 -95825436 + AT_rich Low_complexity Low_complexity 1 23 0 270 0 0 0 chr5 103805195 103805225 -95824925 + (A)n Simple_repeat Simple_repeat 1 30 0 221 57 29 0 chr5 103805472 103805507 -95824643 + (TC)n Simple_repeat Simple_repeat 1 36 0 359 323 132 19 chr5 103805671 103805928 -95824222 + L1MEd LINE L1 1354 1639 -4891 28702 126 27 58 chr5 103805933 103812219 -95817931 + L1PA7 LINE L1 12 6106 -48 312 292 42 33 chr5 103812236 103812356 -95817794 + L1MEd LINE L1 1604 1724 -4816 198 71 0 0 chr5 103812617 103812645 -95817505 + (CA)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr5 103813475 103813497 -95816653 + AT_rich Low_complexity Low_complexity 1 22 0 1967 126 65 0 chr5 103814492 103814817 -95815333 - L1PA16 LINE L1 0 6166 5821 198 71 0 0 chr5 103814869 103814897 -95815253 + (TG)n Simple_repeat Simple_repeat 1 28 0 1527 40 20 10 chr5 103815093 103815291 -95814859 - L1PA3 LINE L1 -1 6154 5955 22 0 0 0 chr5 103815379 103815401 -95814749 + AT_rich Low_complexity Low_complexity 1 22 0 225 364 23 8 chr5 103815423 103815552 -95814598 - L1MC4 LINE L1 -612 7430 7300 23 0 0 0 chr5 103816113 103816136 -95814014 + AT_rich Low_complexity Low_complexity 1 23 0 460 231 15 22 chr5 103817628 103817762 -95812388 - L1 LINE L1 -801 5345 5213 3392 188 57 7 chr5 103817780 103818627 -95811523 + L1MA4A LINE L1 3324 5273 -873 3361 172 79 18 chr5 103818638 103819343 -95810807 + L1MA4A LINE L1 5551 6298 -5 23 54 0 0 chr5 103819462 103819499 -95810651 + AT_rich Low_complexity Low_complexity 1 37 0 455 0 18 0 chr5 103820427 103820482 -95809668 + (TTTTG)n Simple_repeat Simple_repeat 5 60 0 1731 158 4 0 chr5 103820487 103820759 -95809391 - AluSg SINE Alu -37 273 1 1912 271 52 29 chr5 103820915 103821527 -95808623 + L1MA8 LINE L1 466 1091 -6398 3885 223 80 83 chr5 103821529 103824025 -95806125 + L1MA8 LINE L1 1970 4416 -3149 2052 199 19 21 chr5 103824025 103824452 -95805698 + MSTC LTR MaLR 3 428 0 3885 223 80 83 chr5 103824452 103825236 -95804914 + L1MA8 LINE L1 4416 5201 -2364 2310 201 8 12 chr5 103825241 103825754 -95804396 - L1MA4 LINE L1 -1103 5043 4533 3860 180 109 53 chr5 103825755 103826271 -95803879 + L1MA4 LINE L1 5048 5534 -766 2818 13 0 0 chr5 103826271 103826586 -95803564 + AluYb8 SINE Alu 1 315 -3 3860 180 109 53 chr5 103826586 103827266 -95802884 + L1MA4 LINE L1 5534 6291 -9 6102 195 31 49 chr5 103827291 103829938 -95800212 + L1MA8 LINE L1 5195 7709 -1 21 36 0 0 chr5 103829984 103830012 -95800138 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 103830441 103830464 -95799686 + AT_rich Low_complexity Low_complexity 1 23 0 201 361 49 16 chr5 103832449 103832571 -95797579 + MER5B DNA MER1_type 12 137 -41 1305 183 113 82 chr5 103833017 103833230 -95796920 + MSTA LTR MaLR 1 206 -222 258 32 0 0 chr5 103833230 103833261 -95796889 + (TC)n Simple_repeat Simple_repeat 1 31 0 1305 183 113 82 chr5 103833261 103833462 -95796688 + MSTA LTR MaLR 206 428 0 7436 156 33 68 chr5 103833466 103835100 -95795050 + MSTA-int LTR MaLR 5 1580 0 1180 193 210 10 chr5 103835107 103835407 -95794743 + MSTA LTR MaLR 8 367 -61 2226 101 0 3 chr5 103835899 103836196 -95793954 - AluSq SINE Alu -17 296 1 243 380 62 16 chr5 103836258 103836516 -95793634 + L2 LINE L2 2200 2469 -845 200 430 0 7 chr5 103836744 103836879 -95793271 + L2 LINE L2 2946 3079 -193 1612 241 57 24 chr5 103837132 103837642 -95792508 + MER90 LTR ERV1 7 533 -81 264 291 35 12 chr5 103837861 103837947 -95792203 - MIR SINE MIR -51 211 124 21 0 0 0 chr5 103838673 103838694 -95791456 + AT_rich Low_complexity Low_complexity 1 21 0 835 211 153 60 chr5 103838936 103839342 -95790808 + MER39 LTR ERV1 20 593 -114 237 258 56 34 chr5 103839346 103839435 -95790715 + MER34C LTR ERV1 495 585 0 411 306 59 28 chr5 103840467 103840859 -95789291 + L1M4 LINE L1 2754 3157 -2989 183 159 16 32 chr5 103841129 103841192 -95788958 + (TA)n Simple_repeat Simple_repeat 2 63 0 294 202 45 39 chr5 103841265 103841443 -95788707 + (TA)n Simple_repeat Simple_repeat 1 179 0 688 186 31 12 chr5 103842545 103842706 -95787444 + L1MA9 LINE L1 5938 6101 -211 28 48 0 0 chr5 103842706 103842748 -95787402 + AT_rich Low_complexity Low_complexity 1 42 0 1119 146 17 52 chr5 103842748 103842981 -95787169 + L1MA9 LINE L1 6088 6312 0 3283 208 31 68 chr5 103843078 103844101 -95786049 - L1 LINE L1 -758 5388 4404 996 242 34 6 chr5 103844075 103844402 -95785748 - L1 LINE L1 -1658 4488 4153 * 6787 156 18 13 chr5 103845744 103846955 -95783195 - HSMAR2 DNA Mariner -7 1295 79 23 33 0 0 chr5 103846955 103846985 -95783165 + AT_rich Low_complexity Low_complexity 1 30 0 353 174 70 0 chr5 103846985 103847071 -95783079 - HSMAR2 DNA Mariner -1197 105 14 27 0 0 0 chr5 103847766 103847793 -95782357 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 103848680 103848701 -95781449 + AT_rich Low_complexity Low_complexity 1 21 0 1426 216 18 42 chr5 103848889 103849274 -95780876 + L1MA9 LINE L1 5705 6080 -232 2009 88 0 0 chr5 103849288 103849562 -95780588 - L1PA14 LINE L1 -1 6160 5887 283 336 20 20 chr5 103849910 103850056 -95780094 + MIR SINE MIR 61 206 -56 243 0 0 0 chr5 103850503 103850530 -95779620 + (CA)n Simple_repeat Simple_repeat 2 28 0 399 21 0 0 chr5 103850653 103850701 -95779449 + (TG)n Simple_repeat Simple_repeat 1 48 0 27 0 0 0 chr5 103850977 103851004 -95779146 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr5 103851564 103851587 -95778563 + AT_rich Low_complexity Low_complexity 1 23 0 757 204 28 11 chr5 103851756 103851932 -95778218 - L1MD3 LINE L1 -86 7909 7731 23 0 0 0 chr5 103852175 103852198 -95777952 + AT_rich Low_complexity Low_complexity 1 23 0 336 111 0 0 chr5 103852325 103852379 -95777771 + (TG)n Simple_repeat Simple_repeat 1 54 0 561 324 91 29 chr5 103852918 103853258 -95776892 + ERVL LTR ERVL 4536 4896 -868 1538 206 76 33 chr5 103853421 103853818 -95776332 + MLT1D LTR MaLR 92 505 0 225 256 58 0 chr5 103855340 103855426 -95774724 + L1MC4 LINE L1 6613 6703 -1339 318 269 168 30 chr5 103855968 103856135 -95774015 + L1ME1 LINE L1 5959 6148 -18 23 33 0 0 chr5 103857005 103857035 -95773115 + AT_rich Low_complexity Low_complexity 1 30 0 731 169 17 0 chr5 103857321 103857439 -95772711 + FRAM SINE Alu 1 119 -57 1537 155 57 65 chr5 103857444 103857811 -95772339 + THE1B LTR MaLR 1 364 0 10545 110 3 51 chr5 103857811 103858672 -95771478 + THE1B-int LTR MaLR 1 748 -832 18427 33 0 0 chr5 103858672 103861700 -95768450 + L1PA3 LINE L1 3168 6195 0 10545 110 3 51 chr5 103861700 103862496 -95767654 + THE1B-int LTR MaLR 748 1580 0 1897 154 27 41 chr5 103862496 103862865 -95767285 + THE1B LTR MaLR 1 364 0 1566 213 9 0 chr5 103863171 103863495 -95766655 + MER47A DNA MER2_type 7 333 -33 4756 199 99 2 chr5 103863495 103864460 -95765690 - LTR28 LTR ERV1 0 1020 21 462 248 18 0 chr5 103865278 103865387 -95764763 + MER20 DNA MER1_type 108 218 -1 823 187 42 12 chr5 103865796 103865962 -95764188 - FRAM SINE Alu -4 172 2 466 294 128 74 chr5 103866009 103866305 -95763845 + LTR16C LTR ERVL 180 491 0 1037 198 20 15 chr5 103867768 103867970 -95762180 + AluJb SINE Alu 89 291 -21 22 35 0 0 chr5 103868116 103868145 -95762005 + AT_rich Low_complexity Low_complexity 1 29 0 1411 207 10 33 chr5 103868928 103869227 -95760923 + AluJo SINE Alu 1 292 -20 22 25 0 25 chr5 103869342 103869363 -95760787 + AT_rich Low_complexity Low_complexity 1 22 -17 1742 177 3 0 chr5 103869363 103869662 -95760488 - AluJb SINE Alu 0 312 13 22 25 0 25 chr5 103869662 103869680 -95760470 + AT_rich Low_complexity Low_complexity 22 39 0 1449 297 76 16 chr5 103870723 103871340 -95758810 + L1MEc LINE L1 134 787 -5609 584 313 158 11 chr5 103871380 103871664 -95758486 - L1MEc LINE L1 -6029 367 42 1418 264 66 69 chr5 103871936 103872245 -95757905 + L1MC4 LINE L1 6476 6784 -1258 2230 185 35 30 chr5 103872245 103872704 -95757446 - LOR1b LTR ERV1 0 461 1 1418 264 66 69 chr5 103872704 103873091 -95757059 + L1MC4 LINE L1 6784 7170 -872 264 181 28 28 chr5 103873085 103873157 -95756993 - L1PA14 LINE L1 -1088 5058 4987 * 5338 141 19 2 chr5 103873157 103874210 -95755940 + L1PA14 LINE L1 5089 6159 -2 245 241 46 35 chr5 103874213 103874300 -95755850 + L1MC4a LINE L1 7102 7189 -619 1899 210 153 57 chr5 103874311 103874996 -95755154 + LTR1B LTR ERV1 1 751 -75 736 267 34 23 chr5 103875115 103875381 -95754769 + L1MC4 LINE L1 7290 7558 -484 692 211 8 110 chr5 103875402 103875648 -95754502 + L1MC4 LINE L1 7782 8002 -40 35 49 0 37 chr5 103875656 103875738 -95754412 + AT_rich Low_complexity Low_complexity 1 79 0 34 0 0 0 chr5 103876120 103876154 -95753996 + AT_rich Low_complexity Low_complexity 1 34 0 280 392 64 27 chr5 103876159 103876455 -95753695 + L2 LINE L2 2825 3131 -182 26 0 0 0 chr5 103876669 103876695 -95753455 + AT_rich Low_complexity Low_complexity 1 26 0 261 128 0 0 chr5 103876943 103876990 -95753160 + (T)n Simple_repeat Simple_repeat 1 47 0 12137 23 0 7 chr5 103876994 103879206 -95750944 - L1PA2 LINE L1 -1 6154 3953 307 93 0 0 chr5 103879206 103879249 -95750901 + L1PA2 LINE L1 3917 3959 -2187 303 28 0 0 chr5 103879482 103879518 -95750632 + (CA)n Simple_repeat Simple_repeat 1 36 0 415 286 48 0 chr5 103881699 103881825 -95748325 + MLT1E1 LTR MaLR 139 270 -384 7989 128 14 3 chr5 103882621 103883790 -95746360 - HSMAR1 DNA Mariner -105 1182 2 256 312 57 51 chr5 103883838 103883995 -95746155 + L2 LINE L2 3147 3304 -9 226 275 0 38 chr5 103884091 103884171 -95745979 + GA-rich Low_complexity Low_complexity 1 77 0 184 146 146 0 chr5 103884576 103884617 -95745533 - L2 LINE L2 -16 3297 3251 272 325 98 8 chr5 103884745 103884868 -95745282 + L2 LINE L2 2594 2727 -587 564 315 79 50 chr5 103885253 103885282 -95744868 - L1MB2 LINE L1 -72 6099 6072 1364 167 6 85 chr5 103885282 103885611 -95744539 - AluJo SINE Alu -5 307 5 564 315 79 50 chr5 103885611 103885653 -95744497 - L1MB2 LINE L1 -99 6072 5700 1472 224 90 57 chr5 103885653 103886224 -95743926 - L1ME2 LINE L1 -148 6018 5452 1915 160 0 0 chr5 103886256 103886563 -95743587 - AluSx SINE Alu -5 307 1 848 260 52 10 chr5 103886563 103886871 -95743279 + L1M4 LINE L1 4604 4924 -1222 2324 269 137 52 chr5 103886880 103887430 -95742720 - L1MEc LINE L1 -2439 3776 3274 2325 62 0 3 chr5 103887430 103887741 -95742409 - AluY SINE Alu 0 311 3 2324 269 137 52 chr5 103887741 103889494 -95740656 - L1MEc LINE L1 -2941 3274 1671 312 48 0 0 chr5 103889494 103889536 -95740614 + (TC)n Simple_repeat Simple_repeat 1 42 0 1549 196 7 25 chr5 103889536 103889821 -95740329 - AluJb SINE Alu -32 280 1 2324 269 137 52 chr5 103889821 103890971 -95739179 - L1MEc LINE L1 -4543 1672 53 261 163 0 0 chr5 103891234 103891283 -95738867 + (TGAA)n Simple_repeat Simple_repeat 1 49 0 2181 108 16 3 chr5 103891678 103891983 -95738167 - AluSg SINE Alu 0 310 2 1449 136 9 0 chr5 103892007 103892228 -95737922 - AluSq SINE Alu -14 299 77 1994 40 28 0 chr5 103892326 103892578 -95737572 + L1PA4 LINE L1 5894 6152 -3 22 0 0 0 chr5 103892966 103892988 -95737162 + AT_rich Low_complexity Low_complexity 1 22 0 2068 197 29 2 chr5 103893760 103894181 -95735969 + MSTB1 LTR MaLR 1 432 0 198 191 0 0 chr5 103895356 103895398 -95734752 + (CA)n Simple_repeat Simple_repeat 2 43 0 2552 170 30 9 chr5 103895861 103896396 -95733754 - L1MA8 LINE L1 -5 6286 5741 22 0 0 0 chr5 103896817 103896839 -95733311 + AT_rich Low_complexity Low_complexity 1 22 0 195 100 0 0 chr5 103897379 103897409 -95732741 + (TAA)n Simple_repeat Simple_repeat 2 31 0 306 370 13 19 chr5 103897895 103898049 -95732101 + L1MDa LINE L1 851 1003 -5369 262 228 62 5 chr5 103898102 103898250 -95731900 + L1MDa LINE L1 1597 1880 -863 21 0 0 0 chr5 103898686 103898707 -95731443 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 103899719 103899742 -95730408 + AT_rich Low_complexity Low_complexity 1 23 0 235 309 108 58 chr5 103899862 103900001 -95730149 + MER5A DNA MER1_type 37 182 -7 203 400 30 7 chr5 103900433 103900568 -95729582 + MIR SINE MIR 57 194 -68 23 33 0 0 chr5 103901126 103901156 -95728994 + AT_rich Low_complexity Low_complexity 1 30 0 21 71 0 0 chr5 103901262 103901304 -95728846 + AT_rich Low_complexity Low_complexity 1 42 0 24 53 0 0 chr5 103902856 103902894 -95727256 + AT_rich Low_complexity Low_complexity 1 38 0 12888 142 18 16 chr5 103904828 103906968 -95723182 + Tigger1 DNA MER2_type 1 2144 -274 1377 141 53 13 chr5 103906968 103907195 -95722955 - THE1B LTR MaLR 0 364 129 685 154 140 7 chr5 103907202 103907345 -95722805 - LOR1a LTR ERV1 -147 350 189 660 201 22 0 chr5 103907340 103907479 -95722671 - LOR1b LTR ERV1 -319 142 1 * 257 250 0 0 chr5 103907532 103907584 -95722566 - ERVL LTR ERVL -3510 2254 2203 180 141 0 183 chr5 103907584 103907655 -95722495 + L3 LINE CR1 804 861 -716 475 365 30 23 chr5 103907680 103907984 -95722166 - ERVL LTR ERVL -2974 2022 1717 551 248 99 80 chr5 103908129 103908445 -95721705 + Charlie4a DNA MER1_type 2 331 -1630 1958 150 0 0 chr5 103908445 103908738 -95721412 - AluSx SINE Alu -8 304 12 551 248 99 80 chr5 103908738 103908896 -95721254 + Charlie4a DNA MER1_type 331 485 -23 2125 142 82 17 chr5 103910804 103911206 -95718944 - MSTA LTR MaLR 0 428 1 24 53 0 0 chr5 103912081 103912119 -95718031 + AT_rich Low_complexity Low_complexity 1 38 0 24 67 0 0 chr5 103912743 103912788 -95717362 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 30 chr5 103913110 103913125 -95717025 + AT_rich Low_complexity Low_complexity 1 15 -17 1337 114 19 0 chr5 103913125 103913335 -95716815 - L1PA13 LINE L1 -3 6160 5947 22 0 0 30 chr5 103913335 103913352 -95716798 + AT_rich Low_complexity Low_complexity 15 32 0 22 70 0 0 chr5 103913621 103913664 -95716486 + AT_rich Low_complexity Low_complexity 1 43 0 258 235 15 0 chr5 103913687 103913755 -95716395 + (TA)n Simple_repeat Simple_repeat 2 70 0 222 333 67 29 chr5 103914845 103914950 -95715200 + L2 LINE L2 3151 3259 -13 229 317 0 0 chr5 103915390 103915450 -95714700 - MIR SINE MIR -115 147 88 1366 233 42 0 chr5 103915451 103915923 -95714227 + L1MC/D LINE L1 5008 5495 -743 668 163 41 0 chr5 103915933 103916056 -95714094 - MLT2B1 LTR ERVL -392 128 1 2110 119 3 0 chr5 103916059 103916353 -95713797 + AluSq SINE Alu 3 297 -16 683 151 26 40 chr5 103916358 103916510 -95713640 + L1MC2 LINE L1 6180 6329 -15 243 0 0 0 chr5 103916520 103916547 -95713603 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 1770 217 87 27 chr5 103916978 103917495 -95712655 - LTR10A LTR ERV1 -61 548 1 502 202 53 0 chr5 103917495 103917609 -95712541 - L1MA9 LINE L1 -46 6266 6147 22 0 0 0 chr5 103917968 103917990 -95712160 + AT_rich Low_complexity Low_complexity 1 22 0 2110 192 56 23 chr5 103918427 103918912 -95711238 - L1MA8 LINE L1 -5 6286 5786 3486 154 12 2 chr5 103918912 103919490 -95710660 - Tigger4(Zombi) DNA MER2_type 0 2731 2148 1196 199 22 4 chr5 103919485 103919716 -95710434 - Tigger4(Zombi) DNA MER2_type -2496 235 1 * 2888 158 20 8 chr5 103919716 103920381 -95709769 - L1MA8 LINE L1 -504 5787 5113 2048 128 0 0 chr5 103920488 103920785 -95709365 - AluSx SINE Alu -7 305 9 200 354 15 0 chr5 103921344 103921409 -95708741 - L2 LINE L2 -3 3310 3245 2178 101 0 3 chr5 103921914 103922211 -95707939 - AluSx SINE Alu -14 298 3 3513 224 34 55 chr5 103922223 103923299 -95706851 - L1MD2 LINE L1 -2 6357 5304 286 250 10 10 chr5 103923316 103923416 -95706734 - L1MD2 LINE L1 -3307 2839 2740 1403 200 11 14 chr5 103923476 103923800 -95706350 - AluJb SINE Alu 0 323 1 22 0 0 0 chr5 103924615 103924637 -95705513 + AT_rich Low_complexity Low_complexity 1 22 0 493 322 109 0 chr5 103924774 103924985 -95705165 + LTR16A LTR ERVL 203 436 -14 25 99 0 0 chr5 103925247 103925328 -95704822 + AT_rich Low_complexity Low_complexity 1 81 0 2389 34 13 3 chr5 103925810 103926108 -95704042 - AluY SINE Alu -10 301 1 219 154 0 0 chr5 103926208 103926247 -95703903 + (TTG)n Simple_repeat Simple_repeat 2 40 0 2109 79 18 0 chr5 103926470 103926749 -95703401 - AluY SINE Alu -27 284 1 248 388 45 0 chr5 103927166 103927300 -95702850 + L2 LINE L2 2915 3054 -259 257 255 53 32 chr5 103927639 103927733 -95702417 + MIR SINE MIR 120 215 -47 28 48 0 0 chr5 103928141 103928183 -95701967 + AT_rich Low_complexity Low_complexity 1 42 0 22 56 0 0 chr5 103928480 103928516 -95701634 + AT_rich Low_complexity Low_complexity 1 36 0 198 0 0 0 chr5 103928919 103928941 -95701209 + (A)n Simple_repeat Simple_repeat 1 22 0 829 329 38 29 chr5 103929913 103930357 -95699793 + LTR16A LTR ERVL 1 448 -2 21 36 0 0 chr5 103931286 103931314 -95698836 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 103931562 103931583 -95698567 + AT_rich Low_complexity Low_complexity 1 21 0 439 325 136 16 chr5 103931858 103932101 -95698049 - L3 LINE CR1 -338 1239 968 207 0 0 0 chr5 103932266 103932289 -95697861 + (TAGA)n Simple_repeat Simple_repeat 4 26 0 459 205 162 0 chr5 103932289 103932406 -95697744 - AluJo SINE Alu -176 136 1 1624 113 17 0 chr5 103932518 103932748 -95697402 - AluSg/x SINE Alu -12 298 65 5250 187 22 4 chr5 103934714 103935811 -95694339 + L1PA13 LINE L1 2273 3389 -2757 8519 146 9 19 chr5 103935817 103938194 -95691956 + L1PA13 LINE L1 3806 6156 -7 227 321 0 12 chr5 103938885 103938966 -95691184 + L2 LINE L2 3187 3266 -6 2408 112 5 35 chr5 103939143 103939518 -95690632 + THE1B LTR MaLR 1 364 0 257 330 10 0 chr5 103939523 103939623 -95690527 + L1ME3A LINE L1 5792 5892 -278 605 265 46 23 chr5 103939634 103939853 -95690297 + L1ME3A LINE L1 5935 6158 -12 696 256 50 20 chr5 103941023 103941222 -95688928 + L1MA1 LINE L1 231 435 -7130 16479 179 21 16 chr5 103941224 103942350 -95687800 + L1MA1 LINE L1 636 1755 -5810 258 32 0 0 chr5 103942350 103942381 -95687769 + (GA)n Simple_repeat Simple_repeat 2 32 0 16479 179 21 16 chr5 103942381 103944045 -95686105 + L1MA1 LINE L1 1755 3409 -4156 1962 152 23 0 chr5 103944045 103944348 -95685802 + AluSx SINE Alu 1 310 -2 16479 179 21 16 chr5 103944348 103946037 -95684113 + L1MA1 LINE L1 3409 5139 -2426 5143 127 19 8 chr5 103946037 103946889 -95683261 + L1MA1 LINE L1 6860 7720 -1 16479 179 21 16 chr5 103946889 103946903 -95683247 + L1MA1 LINE L1 5139 5151 -2414 2434 263 70 32 chr5 103947474 103948232 -95681918 - L1M2b LINE L1 -6407 802 16 277 286 62 9 chr5 103948490 103948602 -95681548 + MER63 DNA MER1_type 674 791 -271 348 43 0 0 chr5 103949125 103949171 -95680979 + (CA)n Simple_repeat Simple_repeat 2 47 0 2312 112 0 0 chr5 103949217 103949529 -95680621 - AluSq SINE Alu 0 313 2 22 56 0 0 chr5 103950517 103950553 -95679597 + AT_rich Low_complexity Low_complexity 1 36 0 31 58 0 0 chr5 103951891 103951943 -95678207 + AT_rich Low_complexity Low_complexity 1 52 0 2011 151 0 10 chr5 103952460 103952765 -95677385 - AluSx SINE Alu -5 307 6 231 61 0 0 chr5 103952867 103952900 -95677250 + (GA)n Simple_repeat Simple_repeat 2 34 0 24 32 0 0 chr5 103952970 103953001 -95677149 + AT_rich Low_complexity Low_complexity 1 31 0 1294 324 195 12 chr5 103954451 103955381 -95674769 + L2 LINE L2 1855 2954 -360 1514 179 66 66 chr5 103955399 103955778 -95674372 + MSTD LTR MaLR 1 379 -17 608 283 85 28 chr5 103955799 103956046 -95674104 + L2 LINE L2 3001 3261 -52 426 298 123 0 chr5 103956477 103956729 -95673421 + Charlie7 DNA MER1_type 401 683 -1929 310 336 15 0 chr5 103956879 103957010 -95673140 + Charlie7 DNA MER1_type 885 1017 -1595 280 271 42 72 chr5 103957459 103957695 -95672455 + Charlie7 DNA MER1_type 1632 1860 -752 1057 239 41 30 chr5 103957713 103958249 -95671901 - L1ME LINE L1 -652 5514 4963 334 266 47 90 chr5 103958249 103958527 -95671623 + L1ME LINE L1 4421 4686 -1460 244 143 29 0 chr5 103958836 103958906 -95671244 + (TA)n Simple_repeat Simple_repeat 1 72 0 214 189 95 0 chr5 103958918 103959066 -95671084 + (TA)n Simple_repeat Simple_repeat 1 162 0 699 224 26 0 chr5 103959226 103959378 -95670772 - AluJb SINE Alu -23 289 134 338 359 47 9 chr5 103959430 103959750 -95670400 + L1ME LINE L1 5386 5717 -453 605 305 57 3 chr5 103960208 103960575 -95669575 + L1ME LINE L1 4862 5248 -898 552 247 161 7 chr5 103960684 103960976 -95669174 + L1ME LINE L1 5377 5713 -457 893 300 89 36 chr5 103960977 103961927 -95668223 - L1MCc LINE L1 -4369 2753 1587 871 253 69 0 chr5 103961919 103962152 -95667998 - L1MCc LINE L1 -5209 1214 966 * 27 62 0 0 chr5 103962322 103962370 -95667780 + AT_rich Low_complexity Low_complexity 1 48 0 2438 54 0 3 chr5 103962834 103963128 -95667022 - AluY SINE Alu -18 293 1 2132 102 7 7 chr5 103963318 103963611 -95666539 + AluSg SINE Alu 9 301 -9 1836 140 21 0 chr5 103963827 103964112 -95666038 + AluSx SINE Alu 12 302 -10 24 53 0 0 chr5 103965728 103965766 -95664384 + AT_rich Low_complexity Low_complexity 1 38 0 864 127 61 12 chr5 103966075 103966240 -95663910 - L1MC3 LINE L1 -1861 5924 5752 277 224 144 32 chr5 103966333 103966458 -95663692 + L1M4 LINE L1 5044 5182 -964 1010 291 155 5 chr5 103966463 103966909 -95663241 - MLT1E2 LTR MaLR -3 623 111 316 284 47 8 chr5 103967034 103967161 -95662989 - MLT1E2-int LTR MaLR 0 1371 1240 311 233 61 110 chr5 103967376 103967539 -95662611 - MLT1E2-int LTR MaLR -275 1096 942 21 0 0 0 chr5 103967598 103967619 -95662531 + AT_rich Low_complexity Low_complexity 1 21 0 442 174 0 0 chr5 103967699 103967768 -95662382 - AluSg/x SINE Alu -27 282 214 239 391 17 0 chr5 103967805 103967920 -95662230 - MLT1E2-int LTR MaLR -563 808 692 1398 261 29 70 chr5 103968028 103968642 -95661508 - MLT1E2-int LTR MaLR -768 603 15 1288 273 61 25 chr5 103968710 103969154 -95660996 - MLT1E2 LTR MaLR -30 596 137 356 222 33 11 chr5 103969234 103969324 -95660826 + MLT1C LTR MaLR 344 435 -32 3446 164 11 18 chr5 103969355 103970511 -95659639 + L1PA14 LINE L1 4712 5864 -297 192 263 0 18 chr5 103972542 103972599 -95657551 - MIR3 SINE MIR -5 203 148 2037 141 10 13 chr5 103972694 103973006 -95657144 - AluJo SINE Alu -1 311 1 1308 115 0 0 chr5 103973016 103973190 -95656960 - AluSg/x SINE Alu 0 312 139 400 172 92 23 chr5 103973190 103973277 -95656873 + AluSg/x SINE Alu 197 289 -23 472 141 0 13 chr5 103973626 103973704 -95656446 - AluJb SINE Alu -179 133 57 1240 256 69 32 chr5 103975018 103975580 -95654570 - MER69 DNA AcHobo -28 2498 1916 1095 156 9 165 chr5 103975849 103976182 -95653968 - AluJo SINE Alu -31 281 1 231 328 61 8 chr5 103976333 103976464 -95653686 - MER69 DNA AcHobo -2171 355 218 1450 187 64 65 chr5 103976487 103977004 -95653146 - MER67C LTR ERV1 -28 486 1 294 376 162 16 chr5 103977250 103977700 -95652450 + L2 LINE L2 2451 2966 -348 311 296 10 20 chr5 103977756 103977854 -95652296 - L1M LINE L1 -743 5419 5323 25 0 0 0 chr5 103977990 103978015 -95652135 + AT_rich Low_complexity Low_complexity 1 25 0 211 343 45 0 chr5 103978333 103978400 -95651750 - L2 LINE L2 -23 3290 3221 183 114 0 0 chr5 103978477 103978512 -95651638 + (TA)n Simple_repeat Simple_repeat 2 36 0 2032 302 164 13 chr5 103978541 103979626 -95650524 - L2 LINE L2 -685 2629 1381 1975 220 77 67 chr5 103979921 103980030 -95650120 + MER82 DNA MER2_type 79 185 -468 2075 116 0 40 chr5 103980030 103980332 -95649818 + AluSx SINE Alu 1 290 -22 1975 220 77 67 chr5 103980332 103980791 -95649359 + MER82 DNA MER2_type 185 653 0 260 313 30 30 chr5 103980978 103981112 -95649038 + MLT1H LTR MaLR 29 162 -387 914 158 17 57 chr5 103981453 103981630 -95648520 - FAM SINE Alu -8 41 1 446 244 71 8 chr5 103981683 103981810 -95648340 + MLT1G1 LTR MaLR 5 139 -456 2282 123 25 6 chr5 103981909 103982266 -95647884 + THE1B LTR MaLR 1 364 0 9449 105 63 44 chr5 103982267 103983810 -95646340 + THE1B-int LTR MaLR 2 1574 -6 1289 113 49 5 chr5 103983817 103984020 -95646130 + THE1B LTR MaLR 3 214 -150 744 177 15 0 chr5 103984029 103984159 -95645991 - FLAM_C SINE Alu -1 132 1 626 137 0 0 chr5 103984161 103984263 -95645887 - AluSp/q SINE Alu -2 311 210 225 0 0 0 chr5 103987291 103987316 -95642834 + (T)n Simple_repeat Simple_repeat 1 25 0 281 250 115 19 chr5 103988315 103988419 -95641731 + L2 LINE L2 3104 3217 -96 1735 161 68 0 chr5 103988425 103988735 -95641415 + MER2 DNA MER2_type 1 331 -14 1209 119 106 0 chr5 103988728 103988946 -95641204 + L1MA6 LINE L1 6056 6296 -4 23 33 0 0 chr5 103988962 103988992 -95641158 + AT_rich Low_complexity Low_complexity 1 30 0 1327 191 46 39 chr5 103989229 103989273 -95640877 + MLT1A2 LTR MaLR 1 43 -353 2247 87 3 13 chr5 103989273 103989573 -95640577 + AluY SINE Alu 1 297 -14 1327 191 46 39 chr5 103989573 103989854 -95640296 + MLT1A2 LTR MaLR 43 341 -55 727 124 15 36 chr5 103989985 103990122 -95640028 + AluY SINE Alu 163 296 -15 1482 225 14 29 chr5 103990122 103990397 -95639753 + MLT1A2 LTR MaLR 34 305 -69 2051 144 30 0 chr5 103990397 103990695 -95639455 - AluJb SINE Alu -3 309 3 1482 225 14 29 chr5 103990695 103990765 -95639385 + MLT1A2 LTR MaLR 305 374 0 978 194 24 10 chr5 103990785 103990929 -95639221 + MER3 DNA MER1_type 1 150 -59 2471 77 0 0 chr5 103990929 103991239 -95638911 - AluY SINE Alu -1 310 1 978 194 24 10 chr5 103991239 103991300 -95638850 + MER3 DNA MER1_type 150 209 0 29 47 0 0 chr5 103991847 103991890 -95638260 + AT_rich Low_complexity Low_complexity 1 43 0 956 225 144 38 chr5 103992629 103993240 -95636910 + LTR41 LTR ERVL 1 761 -12 441 256 0 85 chr5 103994247 103994366 -95635784 + MIR3 SINE MIR 12 115 -93 2413 81 0 0 chr5 103994366 103994663 -95635487 - AluSg SINE Alu -13 297 1 441 256 0 85 chr5 103994663 103994707 -95635443 + MIR3 SINE MIR 115 161 -47 293 256 96 40 chr5 103994761 103994886 -95635264 + MIR SINE MIR 105 236 -26 2319 74 0 0 chr5 103995053 103995338 -95634812 + AluY SINE Alu 1 285 -26 234 0 0 0 chr5 103995338 103995364 -95634786 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2289 75 0 0 chr5 103995875 103996157 -95633993 + AluY SINE Alu 1 282 -29 787 224 51 20 chr5 103996417 103996613 -95633537 - MER58C DNA MER1_type -3 212 11 684 289 50 0 chr5 103996730 103996948 -95633202 - L1MC/D LINE L1 -2090 5718 5490 2150 128 0 0 chr5 103996977 103997274 -95632876 + AluSx SINE Alu 1 297 -15 323 277 70 12 chr5 103997339 103997511 -95632639 - L1MC/D LINE L1 -670 5496 5317 659 204 105 30 chr5 103997886 103998674 -95631476 + L1ME1 LINE L1 5204 6204 -5 180 0 0 0 chr5 103998725 103998745 -95631405 + (A)n Simple_repeat Simple_repeat 1 20 0 2127 108 20 0 chr5 103998843 103999138 -95631012 + AluSx SINE Alu 1 301 -11 680 279 24 49 chr5 103999311 103999558 -95630592 - MIR SINE MIR -13 249 9 23 0 0 0 chr5 104000028 104000051 -95630099 + AT_rich Low_complexity Low_complexity 1 23 0 485 249 16 60 chr5 104000365 104000550 -95629600 - L2 LINE L2 -140 3173 2997 3818 86 2 4 chr5 104000690 104001202 -95628948 + MER9 LTR ERVK 1 511 0 314 313 95 114 chr5 104001617 104001803 -95628347 + L3 LINE CR1 421 609 -968 2319 102 0 0 chr5 104001803 104002106 -95628044 + AluSq SINE Alu 5 307 -6 314 313 95 114 chr5 104002106 104002331 -95627819 + L3 LINE CR1 609 824 -753 2076 131 0 0 chr5 104002347 104002671 -95627479 - AluSc SINE Alu 0 309 1 784 241 39 20 chr5 104002839 104003042 -95627108 - MER3 DNA MER1_type -1 208 2 2317 100 3 0 chr5 104003184 104003493 -95626657 + AluSp SINE Alu 1 310 -3 276 175 0 0 chr5 104003498 104003561 -95626589 + (CA)n Simple_repeat Simple_repeat 2 64 0 350 219 55 0 chr5 104003570 104003643 -95626507 + MER58C DNA MER1_type 138 214 -1 1748 198 67 82 chr5 104003758 104004082 -95626068 + L1MC3 LINE L1 6382 6709 -1076 4371 48 4 2 chr5 104004082 104004627 -95625523 + L1PA7 LINE L1 5598 6143 -11 1748 198 67 82 chr5 104004627 104004745 -95625405 + L1MC3 LINE L1 6709 6827 -958 2133 103 7 0 chr5 104004745 104005053 -95625097 - AluSq SINE Alu 0 312 3 1748 198 67 82 chr5 104005053 104005193 -95624957 + L1MC3 LINE L1 6827 6957 -828 249 264 22 33 chr5 104005220 104005311 -95624839 + MLT1F1 LTR MaLR 36 125 -442 1995 186 94 11 chr5 104005365 104005812 -95624338 + L1MD3 LINE L1 7506 7989 -6 1238 223 49 88 chr5 104005871 104006417 -95623733 + L1MC4 LINE L1 6625 7117 -844 13077 49 8 0 chr5 104006417 104008833 -95621317 - L1PA5 LINE L1 0 6154 3726 430 51 0 0 chr5 104008833 104008892 -95621258 + L1PA5 LINE L1 3674 3732 -2414 * 907 293 15 15 chr5 104008883 104009218 -95620932 + L1MC4 LINE L1 7096 7430 -612 1920 144 11 57 chr5 104009288 104009641 -95620509 + MER1B DNA MER1_type 1 337 0 2057 137 0 13 chr5 104009717 104010032 -95620118 + AluJb SINE Alu 1 311 -1 2355 97 0 6 chr5 104010297 104010608 -95619542 - AluSx SINE Alu -3 309 1 1979 129 7 0 chr5 104010618 104010904 -95619246 - AluSx SINE Alu -24 288 1 22 0 0 0 chr5 104011240 104011262 -95618888 + AT_rich Low_complexity Low_complexity 1 22 0 1994 118 57 0 chr5 104011855 104012135 -95618015 + AluSx SINE Alu 1 296 -16 2183 112 10 0 chr5 104012141 104012444 -95617706 + AluSp SINE Alu 1 306 -7 2019 133 10 3 chr5 104012639 104012941 -95617209 - AluSx SINE Alu -8 304 1 199 306 27 27 chr5 104013270 104013381 -95616769 + L2 LINE L2 1441 1551 -1763 223 250 240 30 chr5 104013447 104013547 -95616603 + L2 LINE L2 3184 3304 -9 2094 120 3 0 chr5 104013836 104014127 -95616023 + AluSx SINE Alu 1 292 -20 269 345 68 40 chr5 104015991 104016240 -95613910 + L2 LINE L2 2888 3143 -129 423 0 0 0 chr5 104016538 104016585 -95613565 + (TG)n Simple_repeat Simple_repeat 2 48 0 200 159 45 0 chr5 104016590 104016634 -95613516 + GA-rich Low_complexity Low_complexity 1 46 0 226 206 16 63 chr5 104016701 104016764 -95613386 + Charlie8 DNA MER1_type 1360 1419 -998 577 240 182 22 chr5 104016978 104017253 -95612897 + MER46C DNA MER2_type 7 325 -13 1475 191 7 13 chr5 104017402 104017706 -95612444 + AluJo SINE Alu 6 307 -5 23 0 0 0 chr5 104018878 104018901 -95611249 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 104019236 104019261 -95610889 + AT_rich Low_complexity Low_complexity 1 25 0 34 93 0 0 chr5 104020235 104020332 -95609818 + AT_rich Low_complexity Low_complexity 1 97 0 380 310 131 9 chr5 104020397 104020732 -95609418 - L1ME4a LINE L1 -220 5901 5526 339 293 111 34 chr5 104021463 104021815 -95608335 + HAL1 LINE L1 779 1157 -1350 231 292 122 60 chr5 104021972 104022342 -95607808 + HAL1 LINE L1 1394 1786 -721 609 69 0 0 chr5 104022588 104022675 -95607475 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 7732 23 0 0 chr5 104022738 104023666 -95606484 - L1PA3 LINE L1 0 6155 5228 3191 24 0 0 chr5 104023666 104024044 -95606106 + L1PA3 LINE L1 4848 5225 -921 22 0 0 0 chr5 104024343 104024365 -95605785 + AT_rich Low_complexity Low_complexity 1 22 0 1373 266 58 15 chr5 104024495 104024957 -95605193 + MER110 LTR ERV1 1 482 -9 1825 228 69 57 chr5 104025066 104025459 -95604691 + L1MB3 LINE L1 680 1087 -5772 2402 101 31 17 chr5 104025459 104025816 -95604334 - THE1B LTR MaLR 0 364 3 1825 228 69 57 chr5 104025816 104026128 -95604022 + L1MB3 LINE L1 1087 1394 -5465 938 209 159 40 chr5 104026155 104026432 -95603718 + MLT1A1 LTR MaLR 56 365 0 981 265 41 64 chr5 104026433 104026946 -95603204 + L1MB3 LINE L1 1386 1882 -4973 2312 106 0 0 chr5 104026946 104027249 -95602901 - AluSg SINE Alu -7 303 1 981 265 41 64 chr5 104027249 104027387 -95602763 + L1MB3 LINE L1 1882 2022 -4833 1272 253 84 5 chr5 104027405 104027808 -95602342 + L1MB3 LINE L1 5498 5932 -1025 339 286 10 41 chr5 104027843 104027941 -95602209 - L2 LINE L2 -45 3227 3133 229 216 20 0 chr5 104028125 104028176 -95601974 - L1MD3 LINE L1 -232 7763 7712 * 3336 98 10 2 chr5 104028159 104028649 -95601501 - L1P5 LINE L1 -377 5774 5281 * 5087 200 6 29 chr5 104028646 104029838 -95600312 - L1 LINE L1 -1447 4699 3535 2299 107 6 3 chr5 104029838 104030183 -95599967 + L1PB1 LINE L1 5804 6150 -1 3302 219 69 12 chr5 104030197 104031222 -95598928 + L1MB3 LINE L1 5917 6994 0 4579 153 36 34 chr5 104031277 104032170 -95597980 - Ricksha DNA DNA 0 3251 2357 729 193 14 0 chr5 104032187 104032332 -95597818 - Ricksha DNA DNA -1107 147 1 1689 189 17 8 chr5 104032887 104033242 -95596908 + L1MB8 LINE L1 5814 6171 -7 256 300 50 10 chr5 104033362 104033462 -95596688 - LTR67 LTR ERVL -30 527 424 2109 135 11 45 chr5 104033613 104033990 -95596160 - THE1B LTR MaLR 0 364 1 265 306 176 18 chr5 104034516 104034856 -95595294 - L1 LINE L1 -3050 3096 2703 676 204 66 56 chr5 104035017 104035213 -95594937 + L1ME1 LINE L1 5964 6161 -5 1687 241 68 8 chr5 104035470 104035868 -95594282 - MER54A LTR ERVL -2 899 478 315 49 0 0 chr5 104037149 104037190 -95592960 + (TG)n Simple_repeat Simple_repeat 2 42 0 346 161 0 0 chr5 104038148 104038210 -95591940 + L1MB3 LINE L1 6084 6145 -38 330 231 26 0 chr5 104038211 104038289 -95591861 + L1MC4 LINE L1 6624 6703 -1339 252 143 0 0 chr5 104038303 104038345 -95591805 + (CA)n Simple_repeat Simple_repeat 2 43 0 247 335 118 13 chr5 104039847 104039999 -95590151 - MIR SINE MIR -3 259 92 291 289 72 12 chr5 104040236 104040319 -95589831 - MER5A DNA MER1_type -48 141 54 473 307 26 33 chr5 104041359 104041512 -95588638 - MIR SINE MIR -110 152 1 232 324 99 18 chr5 104041808 104041919 -95588231 + L2 LINE L2 3189 3308 -5 1973 142 3 0 chr5 104041974 104042262 -95587888 + AluSg SINE Alu 10 298 -12 1530 37 0 5 chr5 104042370 104042558 -95587592 + L1PA3 LINE L1 5969 6155 0 2056 156 8 54 chr5 104043211 104043262 -95586888 - L1PB3 LINE L1 0 6154 6102 1613 152 7 11 chr5 104043262 104043539 -95586611 + AluJb SINE Alu 23 298 -14 2056 156 8 54 chr5 104043539 104043877 -95586273 - L1PB3 LINE L1 -52 6102 5783 296 143 18 0 chr5 104043881 104043937 -95586213 + (CA)n Simple_repeat Simple_repeat 2 58 0 633 97 21 0 chr5 104043937 104044030 -95586120 - L1PB3 LINE L1 -365 5789 5695 699 288 27 5 chr5 104044838 104045022 -95585128 - MIR SINE MIR -67 195 8 38 51 0 0 chr5 104045122 104045181 -95584969 + AT_rich Low_complexity Low_complexity 1 59 0 4328 63 2 2 chr5 104045468 104046024 -95584126 - L1PA7 LINE L1 -6 6148 5593 215 163 0 20 chr5 104046365 104046414 -95583736 + A-rich Low_complexity Low_complexity 6 53 0 2362 76 0 3 chr5 104047222 104047523 -95582627 - AluY SINE Alu -11 300 1 191 437 23 0 chr5 104047716 104047890 -95582260 + L2 LINE L2 2554 2731 -583 191 386 112 9 chr5 104047931 104048154 -95581996 + L2 LINE L2 2809 3054 -218 411 21 0 0 chr5 104048863 104048911 -95581239 + (TG)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr5 104049024 104049045 -95581105 + AT_rich Low_complexity Low_complexity 1 21 0 2534 231 33 12 chr5 104049181 104049849 -95580301 - L1MC3 LINE L1 -722 7063 6382 1784 136 79 0 chr5 104050432 104050711 -95579439 + AluSq SINE Alu 1 301 -12 332 328 135 16 chr5 104050973 104051217 -95578933 + L3 LINE CR1 1296 1568 -9 1006 179 109 47 chr5 104051613 104051870 -95578280 - AluJo SINE Alu -31 281 9 321 336 31 16 chr5 104052306 104052434 -95577716 - L2 LINE L2 0 3313 3184 221 53 53 0 chr5 104053272 104053310 -95576840 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2878 23 9 0 chr5 104053310 104053653 -95576497 - L1PA3 LINE L1 -10 6145 5800 1045 200 17 21 chr5 104054142 104054254 -95575896 - L1M3 LINE L1 -398 5770 5659 2062 138 3 0 chr5 104054254 104054551 -95575599 - AluSq SINE Alu -15 298 1 1045 200 17 21 chr5 104054551 104054720 -95575430 - L1M3 LINE L1 -509 5659 5476 21 0 0 0 chr5 104054798 104054819 -95575331 + AT_rich Low_complexity Low_complexity 1 21 0 319 305 63 11 chr5 104056197 104056292 -95573858 - L2 LINE L2 -4 3268 3169 450 240 52 0 chr5 104056525 104056621 -95573529 + L2 LINE L2 3208 3308 -5 2131 252 40 51 chr5 104056634 104057325 -95572825 + L1M4 LINE L1 15 698 -5844 896 188 4 109 chr5 104057430 104057686 -95572464 - MLT1A1 LTR MaLR -124 241 13 24 53 0 0 chr5 104058008 104058046 -95572104 + AT_rich Low_complexity Low_complexity 1 38 0 309 89 0 0 chr5 104059170 104059215 -95570935 + (TG)n Simple_repeat Simple_repeat 2 46 0 2207 169 18 2 chr5 104060759 104061155 -95568995 + L1MB7 LINE L1 5544 5945 -239 2014 173 19 6 chr5 104061165 104061524 -95568626 - L1PB4 LINE L1 -11 6145 5782 228 152 0 0 chr5 104061551 104061597 -95568553 - LTR66 LTR ERVL -171 439 394 2766 148 36 40 chr5 104061597 104061954 -95568196 - L1PB4 LINE L1 -368 5788 5429 1717 158 40 30 chr5 104061954 104062251 -95567899 - AluSx SINE Alu -12 300 1 2766 148 36 40 chr5 104062251 104062570 -95567580 - L1PB4 LINE L1 -727 5429 5110 566 192 0 0 chr5 104062558 104062657 -95567493 + L1MB5 LINE L1 5777 5875 -299 * 452 202 52 40 chr5 104062656 104062829 -95567321 - L1M3 LINE L1 -754 5392 5218 * 1683 171 98 20 chr5 104063027 104063384 -95566766 + L1M2 LINE L1 5398 5782 -530 270 0 0 0 chr5 104063384 104063414 -95566736 + (CA)n Simple_repeat Simple_repeat 2 31 0 736 361 97 35 chr5 104063645 104064367 -95565783 - L2 LINE L2 -337 2977 2211 1864 312 118 35 chr5 104064929 104065179 -95564971 - HAL1 LINE L1 -479 2028 1800 2266 92 0 0 chr5 104065179 104065473 -95564677 - AluSg SINE Alu -6 304 11 1864 312 118 35 chr5 104065473 104066842 -95563308 - HAL1 LINE L1 -707 1800 274 2141 150 77 26 chr5 104066999 104067467 -95562683 - LTR22B LTR ERVK 0 492 1 228 67 0 0 chr5 104067893 104067923 -95562227 + (TA)n Simple_repeat Simple_repeat 1 30 0 418 311 96 49 chr5 104069123 104069409 -95560741 - L1ME3A LINE L1 -215 5955 5643 669 197 34 103 chr5 104069409 104069643 -95560507 - MER20 DNA MER1_type 0 219 2 418 311 96 49 chr5 104069643 104069761 -95560389 - L1ME3A LINE L1 -527 5643 5532 733 211 35 75 chr5 104070070 104070297 -95559853 + MER20 DNA MER1_type 2 219 0 267 288 0 0 chr5 104070297 104070370 -95559780 + L1ME LINE L1 5649 5721 -449 2379 160 22 26 chr5 104070530 104070938 -95559212 - L1MA10 LINE L1 -10 6324 5917 1919 202 215 79 chr5 104070938 104071836 -95558314 + LTR28 LTR ERV1 1 1020 0 2379 160 22 26 chr5 104071836 104071890 -95558260 - L1MA10 LINE L1 -417 5917 5864 2292 228 69 21 chr5 104071994 104072809 -95557341 + L1M4 LINE L1 937 1790 -4831 22 94 0 0 chr5 104072809 104072873 -95557277 + AT_rich Low_complexity Low_complexity 1 64 0 2021 238 59 20 chr5 104072883 104073228 -95556922 + L1M4 LINE L1 2959 3289 -3355 2171 106 50 34 chr5 104073228 104073586 -95556564 + THE1B LTR MaLR 1 364 0 2021 238 59 20 chr5 104073586 104073954 -95556196 + L1M4 LINE L1 3289 3700 -2944 395 200 0 0 chr5 104073948 104074023 -95556127 + L1M4 LINE L1 5203 5277 -1367 * 1160 246 17 3 chr5 104074108 104074396 -95555754 + L1M4 LINE L1 5284 5575 -1069 7248 199 101 35 chr5 104074428 104076074 -95554076 + MER52A LTR ERV1 1 1755 0 1278 228 15 15 chr5 104076428 104076752 -95553398 + L1MA9 LINE L1 5813 6136 -176 334 234 64 11 chr5 104076788 104076882 -95553268 + L1MA9 LINE L1 6130 6228 -84 3094 183 37 3 chr5 104076883 104077457 -95552693 + MER6A DNA MER2_type 1 593 -12 204 231 0 0 chr5 104077458 104077510 -95552640 + (TA)n Simple_repeat Simple_repeat 2 53 0 456 301 90 74 chr5 104078699 104078780 -95551370 - MIR SINE MIR 0 262 184 186 43 0 0 chr5 104078780 104078803 -95551347 + (TG)n Simple_repeat Simple_repeat 2 24 0 456 301 90 74 chr5 104078803 104078977 -95551173 - MIR SINE MIR -78 184 3 2120 122 10 0 chr5 104079104 104079398 -95550752 - AluSx SINE Alu -15 297 1 244 338 91 34 chr5 104079882 104080267 -95549883 + L2 LINE L2 1606 2012 -1302 188 139 0 23 chr5 104081507 104081550 -95548600 + (CAAAAA)n Simple_repeat Simple_repeat 4 45 0 283 303 20 30 chr5 104082031 104082130 -95548020 + L2 LINE L2 2953 3050 -222 1431 197 48 24 chr5 104082888 104083177 -95546973 + AluJo SINE Alu 3 298 -14 21 71 0 0 chr5 104083621 104083663 -95546487 + AT_rich Low_complexity Low_complexity 1 42 0 840 210 6 0 chr5 104084096 104084253 -95545897 - FRAM SINE Alu -18 158 1 2874 73 0 15 chr5 104084565 104084962 -95545188 - L1PA6 LINE L1 0 6154 5764 590 257 17 46 chr5 104084962 104085137 -95545013 - L1PA13 LINE L1 -5849 938 769 3959 164 16 27 chr5 104085137 104087835 -95542315 + L1PA13 LINE L1 3388 6160 -3 397 316 146 6 chr5 104088424 104088582 -95541568 - MER5A DNA MER1_type 0 189 10 41 36 0 0 chr5 104089853 104089908 -95540242 + AT_rich Low_complexity Low_complexity 1 55 0 22 56 0 0 chr5 104090007 104090043 -95540107 + AT_rich Low_complexity Low_complexity 1 36 0 411 113 0 0 chr5 104090757 104090819 -95539331 + (TTCCC)n Simple_repeat Simple_repeat 1 62 0 1723 135 38 0 chr5 104090923 104091189 -95538961 - AluJb SINE Alu -36 276 1 246 62 0 0 chr5 104091723 104091755 -95538395 + (TCTA)n Simple_repeat Simple_repeat 4 35 0 212 57 0 29 chr5 104093090 104093125 -95537025 + (CA)n Simple_repeat Simple_repeat 1 34 0 24 0 0 0 chr5 104094688 104094712 -95535438 + AT_rich Low_complexity Low_complexity 1 24 0 3796 141 81 9 chr5 104095152 104095831 -95534319 - L1PB4 LINE L1 -1 6858 6131 288 281 12 0 chr5 104095861 104095943 -95534207 - L1ME3A LINE L1 -281 5889 5807 755 263 116 14 chr5 104095962 104096247 -95533903 - L1ME2 LINE L1 0 6164 5851 2403 188 52 2 chr5 104096252 104096693 -95533457 + LTR45 LTR ERV1 1 463 -62 29 0 0 0 chr5 104096693 104096722 -95533428 + AT_rich Low_complexity Low_complexity 1 29 0 1009 48 0 16 chr5 104096741 104096866 -95533284 - L1PA6 LINE L1 -7 6147 6025 2702 204 44 19 chr5 104096866 104097666 -95532484 - L1PB4 LINE L1 -743 6106 5334 45148 38 1 2 chr5 104097669 104103833 -95526317 + L1PA3 LINE L1 8 6167 0 10368 232 25 26 chr5 104103837 104104632 -95525518 - L1PB4 LINE L1 -1510 5339 4545 2303 108 3 0 chr5 104104632 104104937 -95525213 - AluSx SINE Alu -6 306 1 10368 232 25 26 chr5 104104937 104108475 -95521675 - L1PB4 LINE L1 -2304 4545 1167 261 0 0 0 chr5 104109063 104109092 -95521058 + (A)n Simple_repeat Simple_repeat 1 29 0 672 137 0 0 chr5 104113758 104113860 -95516290 + AluSp/q SINE Alu 210 311 -2 811 177 15 0 chr5 104113862 104113992 -95516158 + FLAM_C SINE Alu 1 132 -1 1308 113 49 5 chr5 104114001 104114204 -95515946 - THE1B LTR MaLR -150 214 3 9496 102 65 45 chr5 104114211 104115753 -95514397 - THE1B-int LTR MaLR -6 1574 2 2473 120 25 6 chr5 104115754 104116111 -95514039 - THE1B LTR MaLR 0 364 1 449 244 71 8 chr5 104116210 104116337 -95513813 - MLT1G1 LTR MaLR -456 139 5 917 158 17 57 chr5 104116390 104116567 -95513583 + FAM SINE Alu 1 41 -8 260 313 30 30 chr5 104116908 104117042 -95513108 - MLT1H LTR MaLR -387 162 29 2116 214 135 58 chr5 104117234 104117690 -95512460 - MER82 DNA MER2_type 0 653 137 2116 115 0 39 chr5 104117690 104117995 -95512155 - AluSx SINE Alu -19 293 1 2116 214 135 58 chr5 104117995 104118144 -95512006 - MER82 DNA MER2_type -516 137 1 2232 98 0 7 chr5 104118327 104118622 -95511528 - AluSx SINE Alu -18 294 2 1612 96 32 0 chr5 104118623 104118940 -95511210 - L1P4 LINE L1 -676 5485 5161 2654 11 0 0 chr5 104119355 104119640 -95510510 + AluYa5 SINE Alu 17 301 -10 1804 110 0 55 chr5 104119751 104120041 -95510109 + AluSx SINE Alu 39 312 0 2224 120 0 0 chr5 104120064 104120365 -95509785 + AluSg SINE Alu 1 301 -9 23 0 0 0 chr5 104120618 104120641 -95509509 + GC_rich Low_complexity Low_complexity 1 23 0 243 0 0 0 chr5 104120661 104120688 -95509462 + (A)n Simple_repeat Simple_repeat 1 27 0 473 16 33 0 chr5 104121133 104121194 -95508956 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 1530 153 39 64 chr5 104121202 104121353 -95508797 - AluJo SINE Alu -37 275 133 1956 130 11 0 chr5 104121353 104121638 -95508512 + AluSx SINE Alu 1 288 -24 1530 153 39 64 chr5 104121638 104121768 -95508382 - AluJo SINE Alu -179 133 1 2092 117 7 23 chr5 104122931 104123104 -95507046 - AluSx SINE Alu 0 302 135 1720 158 0 58 chr5 104123104 104123279 -95506871 - AluJb SINE Alu -19 293 142 2302 104 7 3 chr5 104123279 104123587 -95506563 - AluSc SINE Alu 0 309 1 1720 158 0 58 chr5 104123587 104123722 -95506428 - AluJb SINE Alu -170 142 1 2092 117 7 23 chr5 104123722 104123855 -95506295 - AluSx SINE Alu -167 135 1 2032 123 9 28 chr5 104124442 104124760 -95505390 + AluSx SINE Alu 1 312 0 287 284 155 39 chr5 104124804 104124959 -95505191 + L2 LINE L2 2938 3110 -162 1320 166 54 86 chr5 104124979 104125173 -95504977 - AluJo SINE Alu -7 305 123 1680 138 29 14 chr5 104125173 104125449 -95504701 - AluSg SINE Alu -30 280 1 1320 166 54 86 chr5 104125449 104125568 -95504582 - AluJo SINE Alu -189 123 2 2050 148 3 0 chr5 104125997 104126308 -95503842 - AluSx SINE Alu 0 312 1 2274 104 10 0 chr5 104127633 104127940 -95502210 + AluSp SINE Alu 2 311 -2 530 248 168 25 chr5 104129186 104129355 -95500795 - L1MC5 LINE L1 -49 7912 7768 2610 111 19 6 chr5 104129355 104129714 -95500436 - THE1B LTR MaLR 0 364 1 530 248 168 25 chr5 104129714 104129943 -95500207 - L1MC5 LINE L1 -193 7768 7457 11192 214 36 17 chr5 104129995 104132756 -95497394 + L1PA16 LINE L1 2262 4971 -1195 4340 70 8 0 chr5 104132756 104133301 -95496849 + L1PA6 LINE L1 5616 6164 0 11192 214 36 17 chr5 104133301 104133820 -95496330 + L1PA16 LINE L1 4971 5479 -687 1321 172 117 76 chr5 104133820 104134110 -95496040 + AluJb SINE Alu 1 302 0 11192 214 36 17 chr5 104134110 104134667 -95495483 + L1PA16 LINE L1 5479 6165 -1 21 57 0 0 chr5 104134844 104134879 -95495271 + AT_rich Low_complexity Low_complexity 1 35 0 941 290 86 21 chr5 104134947 104135375 -95494775 - L1MC4a LINE L1 -1893 5915 5460 187 396 27 13 chr5 104138211 104138360 -95491790 + L2 LINE L2 3122 3272 0 1174 260 106 95 chr5 104138721 104139100 -95491050 - LTR41 LTR ERVL -1 772 399 3716 146 83 39 chr5 104139100 104139772 -95490378 - MER44D DNA MER2_type 0 705 4 1174 260 106 95 chr5 104139772 104140153 -95489997 - LTR41 LTR ERVL -374 399 3 258 362 39 8 chr5 104140292 104140419 -95489731 - L2 LINE L2 -610 2704 2574 2168 117 0 13 chr5 104140513 104140820 -95489330 + AluSq SINE Alu 10 312 -1 244 0 0 0 chr5 104141147 104141174 -95488976 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2142 127 0 0 chr5 104141174 104141466 -95488684 - AluSx SINE Alu -20 292 1 840 323 48 22 chr5 104141890 104142302 -95487848 + LTR16B LTR ERVL 42 464 0 387 307 22 45 chr5 104142303 104142482 -95487668 + MIR SINE MIR 31 205 -57 32 26 0 0 chr5 104143154 104143193 -95486957 + AT_rich Low_complexity Low_complexity 1 39 0 27 29 0 0 chr5 104143228 104143262 -95486888 + AT_rich Low_complexity Low_complexity 1 34 0 765 218 137 98 chr5 104143353 104143699 -95486451 - MER41C LTR ERV1 0 554 178 2328 85 0 7 chr5 104143699 104144004 -95486146 + AluY SINE Alu 3 305 -6 765 218 137 98 chr5 104144004 104144190 -95485960 - MER41C LTR ERV1 -376 178 1 2115 99 3 0 chr5 104145684 104145968 -95484182 + AluSg SINE Alu 22 306 -4 1525 204 3 14 chr5 104145975 104146297 -95483853 - AluJo SINE Alu 0 319 1 769 254 46 40 chr5 104146372 104146699 -95483451 - L1MB7 LINE L1 -30 6154 5826 4120 98 83 11 chr5 104146711 104147353 -95482797 - LTR12 LTR ERV1 0 688 1 595 248 72 52 chr5 104147397 104147704 -95482446 - pTR5 LTR ERV1 -1383 1055 743 1725 202 83 5 chr5 104147731 104148127 -95482023 - L1MB7 LINE L1 -355 5811 5385 23 0 0 0 chr5 104148127 104148150 -95482000 + AT_rich Low_complexity Low_complexity 1 23 0 530 209 6 87 chr5 104148165 104148272 -95481878 - L1MB7 LINE L1 -1436 4710 4620 1798 172 0 0 chr5 104148272 104148580 -95481570 - AluJb SINE Alu 0 308 1 530 209 6 87 chr5 104148580 104148643 -95481507 - L1MB7 LINE L1 -1526 4620 4553 507 282 29 29 chr5 104150003 104150173 -95479977 - MER5A DNA MER1_type -13 176 7 607 248 68 94 chr5 104151298 104151426 -95478724 - L1MC5 LINE L1 -864 7097 6967 4940 86 7 10 chr5 104151426 104152115 -95478035 - L1PA13 LINE L1 -1 6162 5476 607 248 68 94 chr5 104152115 104152401 -95477749 - L1MC5 LINE L1 -994 6967 6694 21 0 0 0 chr5 104152519 104152540 -95477610 + AT_rich Low_complexity Low_complexity 1 21 0 207 343 0 14 chr5 104152978 104153051 -95477099 - MIR SINE MIR -109 153 82 2139 108 0 27 chr5 104153651 104153947 -95476203 - AluSg SINE Alu -16 294 7 2172 131 0 0 chr5 104153964 104154270 -95475880 - AluSg SINE Alu -4 306 1 181 273 0 0 chr5 104156022 104156066 -95474084 + L2 LINE L2 3217 3260 -12 696 142 17 34 chr5 104156413 104156589 -95473561 + CT-rich Low_complexity Low_complexity 3 175 0 302 292 71 39 chr5 104156950 104157104 -95473046 + MLT2E LTR ERVL 53 211 -417 207 330 70 0 chr5 104157433 104157548 -95472602 - MIR SINE MIR -114 148 26 229 290 0 0 chr5 104157978 104158047 -95472103 + T-rich Low_complexity Low_complexity 1 69 0 236 200 0 0 chr5 104159314 104159364 -95470786 + (TAA)n Simple_repeat Simple_repeat 1 50 0 208 338 92 28 chr5 104159901 104160043 -95470107 + MIR SINE MIR 61 211 -51 22 0 0 0 chr5 104161731 104161753 -95468397 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 104162847 104162876 -95467274 + AT_rich Low_complexity Low_complexity 1 29 0 305 226 17 70 chr5 104162879 104162994 -95467156 + L1MC4 LINE L1 6595 6703 -1339 300 275 11 22 chr5 104163003 104163094 -95467056 + L1MC4 LINE L1 6614 6703 -1339 218 103 0 26 chr5 104163098 104163137 -95467013 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 318 200 44 44 chr5 104163138 104163228 -95466922 + L1MC4 LINE L1 6614 6703 -1339 247 172 0 31 chr5 104163228 104163292 -95466858 + (TA)n Simple_repeat Simple_repeat 2 63 0 312 253 0 53 chr5 104163297 104163392 -95466758 + L1MC4 LINE L1 6614 6703 -1339 24 0 0 0 chr5 104164077 104164101 -95466049 + AT_rich Low_complexity Low_complexity 1 24 0 255 259 17 0 chr5 104165508 104165566 -95464584 + MER69 DNA AcHobo 26 84 -93 338 266 211 0 chr5 104165586 104165714 -95464436 + MER5A DNA MER1_type 35 189 0 255 281 56 34 chr5 104166059 104166148 -95464002 + Charlie8 DNA MER1_type 1 91 -2326 742 276 74 21 chr5 104166300 104166543 -95463607 - MIR SINE MIR -3 259 4 23 33 0 0 chr5 104167068 104167098 -95463052 + AT_rich Low_complexity Low_complexity 1 30 0 1788 166 22 11 chr5 104167161 104167516 -95462634 - L1MA4 LINE L1 -6 6294 5936 3106 158 26 4 chr5 104167516 104168056 -95462094 - L1PA15 LINE L1 -6 6159 5604 365 159 0 0 chr5 104168057 104168120 -95462030 - L1PA15 LINE L1 -33 6132 6070 313 94 0 38 chr5 104168113 104168166 -95461984 - L1MA4 LINE L1 -602 5702 5652 * 392 341 16 0 chr5 104168359 104168485 -95461665 + LTR16C LTR ERVL 69 196 -295 266 315 142 24 chr5 104169004 104169131 -95461019 + L2 LINE L2 2831 2972 -341 * 693 266 68 88 chr5 104169128 104169725 -95460425 - L2 LINE L2 -1 3312 2736 * 792 246 97 52 chr5 104169720 104170049 -95460101 + L2 LINE L2 2966 3309 -4 575 346 66 18 chr5 104170079 104170414 -95459736 - L2 LINE L2 -2120 1194 844 854 47 0 0 chr5 104171237 104171344 -95458806 - L1P LINE L1 -1460 4686 4580 * 7912 26 1 0 chr5 104171343 104172276 -95457874 + L1P LINE L1 3648 4581 -1565 6030 157 22 3 chr5 104173490 104175182 -95454968 + L1PB1 LINE L1 4427 6147 -4 22 70 0 0 chr5 104175786 104175829 -95454321 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr5 104175861 104175886 -95454264 + AT_rich Low_complexity Low_complexity 1 25 0 607 315 32 19 chr5 104176546 104176762 -95453388 - MIR SINE MIR -3 259 41 1464 55 21 1 chr5 104177925 104178123 -95452027 - L1PA3 LINE L1 -259 5896 5717 2369 25 0 0 chr5 104178123 104178392 -95451758 + L1PA3 LINE L1 5881 6155 0 3432 133 2 16 chr5 104179126 104179643 -95450507 - MER1A DNA MER1_type -19 510 1 449 229 10 0 chr5 104179970 104180066 -95450084 - MER81 DNA DNA -3 111 15 232 200 0 55 chr5 104180697 104180752 -95449398 - MIR3 SINE MIR -6 202 151 332 355 0 0 chr5 104180844 104180968 -95449182 + MIR3 SINE MIR 67 190 -18 247 191 32 16 chr5 104182292 104182355 -95447795 - HsTC2 DNA Tc2 -1833 65 2 1210 126 19 48 chr5 104183819 104184090 -95446060 - L1MA5 LINE L1 -5 6295 6033 7170 41 4 0 chr5 104184103 104185586 -95444564 - L1PA4 LINE L1 -5 6150 4666 1247 63 0 0 chr5 104185586 104185745 -95444405 + L1P LINE L1 4474 4632 -1514 * 1458 157 0 36 chr5 104185740 104186014 -95444136 - L1MA5 LINE L1 -255 6045 5782 304 256 24 12 chr5 104186014 104186096 -95444054 + (TATG)n Simple_repeat Simple_repeat 2 84 0 247 65 0 0 chr5 104186096 104186142 -95444008 + LTR66 LTR ERVL 394 439 -171 3001 136 8 28 chr5 104186142 104186335 -95443815 - L1MA5 LINE L1 -512 5788 5593 5298 201 29 8 chr5 104186335 104188346 -95441804 - L1PA15 LINE L1 -4 6161 4126 3001 136 8 28 chr5 104188346 104188736 -95441414 - L1MA5 LINE L1 -707 5593 5217 558 198 66 0 chr5 104188737 104188858 -95441292 - L1MA5 LINE L1 -1089 5057 4929 203 393 41 16 chr5 104189563 104189685 -95440465 - MER5A DNA MER1_type -3 186 62 6568 79 4 12 chr5 104190533 104191201 -95438949 - L1PA7 LINE L1 -7 6147 5475 1913 127 6 51 chr5 104191201 104191517 -95438633 - AluSx SINE Alu -10 302 1 6568 79 4 12 chr5 104191517 104192562 -95437588 - L1PA7 LINE L1 -679 5475 4448 2007 138 6 28 chr5 104193004 104193367 -95436783 + THE1A LTR MaLR 1 355 0 252 0 0 0 chr5 104194316 104194344 -95435806 + (TTG)n Simple_repeat Simple_repeat 3 30 0 198 91 0 0 chr5 104195346 104195379 -95434771 + (TC)n Simple_repeat Simple_repeat 2 34 0 232 330 20 50 chr5 104195753 104195853 -95434297 + L2 LINE L2 3176 3272 0 33 43 0 0 chr5 104196471 104196518 -95433632 + AT_rich Low_complexity Low_complexity 1 47 0 30 59 0 0 chr5 104196684 104196735 -95433415 + AT_rich Low_complexity Low_complexity 1 51 0 1735 196 103 46 chr5 104197244 104197719 -95432431 - MER67D LTR ERV1 0 514 13 397 341 37 6 chr5 104199343 104199507 -95430643 - MIR SINE MIR -72 190 22 262 308 240 0 chr5 104200098 104200202 -95429948 + MER5A DNA MER1_type 61 189 0 182 376 0 17 chr5 104200257 104200374 -95429776 + MER5B DNA MER1_type 4 118 -60 1506 268 41 70 chr5 104201323 104201883 -95428267 - MLT1E LTR MaLR 0 593 50 636 170 111 0 chr5 104202310 104202445 -95427705 - MLT1E-int LTR MaLR -784 587 438 420 178 0 14 chr5 104202448 104202521 -95427629 - MER8 DNA MER2_type 0 239 168 420 200 55 0 chr5 104202522 104202605 -95427545 - MER8 DNA MER2_type -142 97 12 562 275 56 0 chr5 104202606 104202907 -95427243 - MLT1E-int LTR MaLR -937 434 2 895 205 183 44 chr5 104202908 104203137 -95427013 - MLT1E LTR MaLR 0 593 364 598 279 45 50 chr5 104203148 104203370 -95426780 + MLT1E3 LTR MaLR 266 486 -138 623 243 168 14 chr5 104203487 104203701 -95426449 + MIR SINE MIR 5 251 -11 2124 129 3 3 chr5 104204187 104204490 -95425660 - AluSx SINE Alu -9 303 1 26 0 0 0 chr5 104206107 104206133 -95424017 + AT_rich Low_complexity Low_complexity 1 26 0 1693 296 55 64 chr5 104206141 104207169 -95422981 - L1MCc LINE L1 -5358 1065 48 369 62 0 0 chr5 104207845 104207893 -95422257 + (CA)n Simple_repeat Simple_repeat 1 48 0 1043 163 81 0 chr5 104207893 104208102 -95422048 - Tigger5 DNA MER2_type -2 2321 2096 1629 266 76 66 chr5 104208103 104208360 -95421790 + L1ME2 LINE L1 3596 3849 -2297 287 163 0 0 chr5 104208360 104208403 -95421747 - 5S rRNA rRNA -78 43 1 1629 266 76 66 chr5 104208403 104209140 -95421010 + L1ME2 LINE L1 3849 4643 -1503 802 188 73 41 chr5 104209185 104209403 -95420747 + MLT1A1 LTR MaLR 1 225 -140 1808 277 65 14 chr5 104209424 104210066 -95420084 + L1ME2 LINE L1 5482 6156 -8 11818 191 78 21 chr5 104210147 104211256 -95418894 + L1MA1 LINE L1 7 1051 -6514 2728 13 0 0 chr5 104211256 104211557 -95418593 + AluY SINE Alu 1 301 -10 11818 191 78 21 chr5 104211557 104212921 -95417229 + L1MA1 LINE L1 1051 2621 -4944 7212 44 0 1 chr5 104212923 104214445 -95415705 - L1PA5 LINE L1 -2 6152 4634 1414 62 0 0 chr5 104214445 104214623 -95415527 + L1PA5 LINE L1 4454 4631 -1515 7338 43 4 1 chr5 104214646 104215571 -95414579 - L1PA5 LINE L1 -3106 3040 2113 * 10729 169 110 16 chr5 104215569 104215804 -95414346 + L1MA1 LINE L1 2625 2836 -4885 183 100 0 0 chr5 104215804 104215834 -95414316 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 10729 169 110 16 chr5 104215834 104216050 -95414100 + L1MA1 LINE L1 2836 3030 -4691 1771 180 3 0 chr5 104216050 104216355 -95413795 + AluJb SINE Alu 1 306 -6 10729 169 110 16 chr5 104216355 104218127 -95412023 + L1MA1 LINE L1 3030 4633 -3088 7604 29 0 1 chr5 104218127 104219122 -95411028 + L1PA3 LINE L1 5158 6152 -3 10729 169 110 16 chr5 104219122 104219776 -95410374 + L1MA1 LINE L1 4633 5224 -2497 315 0 0 0 chr5 104219776 104219811 -95410339 + (CA)n Simple_repeat Simple_repeat 2 36 0 10729 169 110 16 chr5 104219811 104220092 -95410058 + L1MA1 LINE L1 5224 5477 -2244 1967 163 0 0 chr5 104220092 104220393 -95409757 + AluSq SINE Alu 1 301 -12 10729 169 110 16 chr5 104220393 104220761 -95409389 + L1MA1 LINE L1 5477 5809 -1912 4695 29 2 0 chr5 104220761 104221311 -95408839 + L1PA3 LINE L1 5597 6152 -3 10729 169 110 16 chr5 104221311 104222435 -95407715 + L1MA1 LINE L1 5809 7721 0 269 254 42 28 chr5 104222861 104222932 -95407218 - L1MEd LINE L1 -5446 673 602 2022 138 10 0 chr5 104223676 104223967 -95406183 + AluSx SINE Alu 1 294 -18 22 0 0 0 chr5 104224141 104224163 -95405987 + AT_rich Low_complexity Low_complexity 1 22 0 185 328 31 0 chr5 104224575 104224639 -95405511 - L2 LINE L2 -5 3308 3243 532 341 121 39 chr5 104224680 104225444 -95404706 - L2 LINE L2 0 3272 2449 21 36 0 0 chr5 104226138 104226166 -95403984 + AT_rich Low_complexity Low_complexity 1 28 0 389 277 10 0 chr5 104227444 104227545 -95402605 - LTR16C LTR ERVL 0 491 390 12858 167 28 10 chr5 104227853 104229403 -95400747 - Tigger1 DNA MER2_type -30 2388 780 2733 10 0 0 chr5 104229403 104229705 -95400445 - AluYb8 SINE Alu -16 302 1 12858 167 28 10 chr5 104229705 104230500 -95399650 - Tigger1 DNA MER2_type -1638 780 1 2130 41 0 4 chr5 104230901 104231169 -95398981 - L1PA4 LINE L1 -3 6152 5886 349 326 30 7 chr5 104232890 104233025 -95397125 + L2 LINE L2 3168 3305 -8 39 60 0 0 chr5 104235028 104235095 -95395055 + AT_rich Low_complexity Low_complexity 1 67 0 273 136 136 0 chr5 104235213 104235272 -95394878 - MLT1B LTR MaLR 0 390 324 1498 161 69 72 chr5 104235315 104235664 -95394486 - MLT1B LTR MaLR -42 348 1 359 333 8 8 chr5 104235822 104235954 -95394196 - Charlie8 DNA MER1_type -2285 132 1 26 30 0 0 chr5 104236119 104236152 -95393998 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 104237283 104237304 -95392846 + AT_rich Low_complexity Low_complexity 1 21 0 561 317 121 56 chr5 104237664 104237745 -95392405 + LTR16A LTR ERVL 90 164 -286 1502 84 44 35 chr5 104237745 104237971 -95392179 + MER30 DNA MER1_type 3 230 0 561 317 121 56 chr5 104237971 104238211 -95391939 + LTR16A LTR ERVL 164 432 -18 868 231 54 161 chr5 104238235 104238677 -95391473 + L1MD2 LINE L1 5840 6234 -8 195 294 65 76 chr5 104238834 104239018 -95391132 + L3b LINE CR1 1288 1469 -114 343 262 48 78 chr5 104239458 104239664 -95390486 + L1MC/D LINE L1 5277 5476 -2332 1914 216 33 26 chr5 104239832 104240286 -95389864 - MSTB2 LTR MaLR 0 457 1 239 172 35 17 chr5 104240319 104240377 -95389773 + GA-rich Low_complexity Low_complexity 1 59 0 344 145 0 13 chr5 104240377 104240453 -95389697 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 2963 195 34 130 chr5 104241516 104242712 -95387438 + L1 LINE L1 4254 5334 -812 1195 148 36 0 chr5 104242690 104242913 -95387237 + L1MB2 LINE L1 5257 5487 -846 * 654 165 9 0 chr5 104242914 104243023 -95387127 + MLT2A2 LTR ERVL 183 292 -161 275 119 24 0 chr5 104243026 104243068 -95387082 + L1MC1 LINE L1 6260 6302 -31 1708 206 23 5 chr5 104243076 104243460 -95386690 + L1MB2 LINE L1 5777 6167 -4 201 245 0 19 chr5 104243585 104243638 -95386512 + GA-rich Low_complexity Low_complexity 1 52 0 23 54 0 0 chr5 104244745 104244782 -95385368 + AT_rich Low_complexity Low_complexity 1 37 0 1992 164 17 55 chr5 104244834 104244933 -95385217 + MLT1B LTR MaLR 3 104 -286 1936 125 17 47 chr5 104244933 104245293 -95384857 + L1MA2 LINE L1 5956 6304 0 1992 164 17 55 chr5 104245293 104245596 -95384554 + MLT1B LTR MaLR 104 390 0 1284 151 65 140 chr5 104245636 104245987 -95384163 - MER7A DNA MER2_type -22 324 2 1786 280 62 32 chr5 104246049 104246838 -95383312 - L1ME3A LINE L1 -66 6104 5292 232 184 41 0 chr5 104247858 104247907 -95382243 - L1ME LINE L1 -499 5671 5621 230 350 73 91 chr5 104250264 104250550 -95379600 - L2 LINE L2 -38 3234 2954 312 404 13 9 chr5 104250639 104250864 -95379286 - L2 LINE L2 -452 2862 2637 2235 134 89 2 chr5 104251140 104251534 -95378616 - MSTA LTR MaLR 0 428 1 7872 189 19 36 chr5 104251534 104253214 -95376936 - MSTA-int LTR MaLR 0 1651 2 1445 149 145 4 chr5 104253215 104253491 -95376659 - MSTA LTR MaLR 0 428 114 900 119 62 12 chr5 104253559 104253719 -95376431 - L1PA7 LINE L1 0 6154 5987 788 242 92 61 chr5 104254214 104254639 -95375511 + MLT1E LTR MaLR 3 534 -59 420 214 27 54 chr5 104254943 104255055 -95375095 + MLT1E LTR MaLR 485 593 0 242 218 0 0 chr5 104255113 104255168 -95374982 - L1ME3 LINE L1 -26 6136 6082 583 314 48 7 chr5 104255224 104255660 -95374490 - L1M4 LINE L1 -2576 3570 3117 251 320 57 46 chr5 104256026 104256387 -95373763 - L1ME LINE L1 -5937 268 34 912 269 95 50 chr5 104256453 104256969 -95373181 - MLT1F1 LTR MaLR -15 552 14 238 301 67 87 chr5 104256979 104257325 -95372825 - MLT1F1-int LTR MaLR -5 1730 1392 5322 154 42 6 chr5 104257389 104258354 -95371796 - L1MA5 LINE L1 0 6300 5302 318 336 0 35 chr5 104259165 104259308 -95370842 - MLT1H1-int LTR MaLR -1224 147 10 742 302 128 43 chr5 104259358 104259803 -95370347 - MLT1H1 LTR MaLR -72 495 11 1669 159 164 16 chr5 104260448 104260820 -95369330 - MSTA LTR MaLR 0 428 2 342 179 13 13 chr5 104260820 104260898 -95369252 - MSTA-int LTR MaLR 0 1651 1574 2549 114 5 5 chr5 104260898 104261283 -95368867 - MSTA-int LTR MaLR -1193 387 3 1957 169 120 5 chr5 104261285 104261669 -95368481 - MSTA LTR MaLR 0 428 1 540 300 58 51 chr5 104261759 104262032 -95368118 + L1MEc LINE L1 1264 1534 -4862 1928 120 4 4 chr5 104262032 104262306 -95367844 + AluSc SINE Alu 1 274 -35 280 0 24 24 chr5 104262306 104262347 -95367803 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 540 300 58 51 chr5 104262347 104262522 -95367628 + L1MEc LINE L1 1533 1716 -4680 1508 132 4 4 chr5 104262523 104262751 -95367399 + AluSg/x SINE Alu 82 309 -1 11387 191 17 11 chr5 104262788 104266257 -95363893 + L1P4 LINE L1 1 4308 -3276 6053 163 26 12 chr5 104266246 104267571 -95362579 + L1P4 LINE L1 5367 6809 -790 * 2115 96 0 0 chr5 104267571 104267843 -95362307 + AluY SINE Alu 1 272 -39 6053 163 26 12 chr5 104267843 104268146 -95362004 + L1P4 LINE L1 6809 7106 -493 403 166 19 4 chr5 104268259 104268425 -95361725 + AluJb SINE Alu 64 296 -16 387 0 0 0 chr5 104269640 104269683 -95360467 + (TG)n Simple_repeat Simple_repeat 2 44 0 394 348 105 38 chr5 104269684 104270075 -95360075 + L2 LINE L2 2249 2665 -649 314 345 114 44 chr5 104270143 104270459 -95359691 + L2 LINE L2 2624 2961 -353 192 371 162 29 chr5 104271051 104271366 -95358784 + L2 LINE L2 2916 3272 0 929 292 104 25 chr5 104273795 104274226 -95355924 - L2 LINE L2 0 3313 2849 338 109 0 0 chr5 104274895 104274950 -95355200 - L1P LINE L1 -815 5340 5286 5518 112 9 1 chr5 104274950 104275766 -95354384 + L1PA13 LINE L1 5342 6163 0 659 255 16 35 chr5 104275890 104276155 -95353995 + MER31B LTR ERV1 20 390 -76 296 229 12 12 chr5 104276126 104276209 -95353941 + MER67D LTR ERV1 431 513 -1 * 22 0 0 0 chr5 104276778 104276800 -95353350 + AT_rich Low_complexity Low_complexity 1 22 0 816 256 39 138 chr5 104277585 104278120 -95352030 - L2 LINE L2 -1 3312 2831 356 240 47 101 chr5 104278276 104278405 -95351745 + L2 LINE L2 3151 3272 0 307 277 79 0 chr5 104278406 104278507 -95351643 + L1ME3A LINE L1 6054 6162 -8 49 43 0 0 chr5 104278533 104278603 -95351547 + AT_rich Low_complexity Low_complexity 1 70 0 25 0 0 0 chr5 104278686 104278711 -95351439 + AT_rich Low_complexity Low_complexity 1 25 0 213 313 12 25 chr5 104280039 104280119 -95350031 - L2 LINE L2 -5 3308 3230 28 48 0 0 chr5 104280294 104280336 -95349814 + AT_rich Low_complexity Low_complexity 1 42 0 548 289 20 20 chr5 104280423 104280572 -95349578 - MIR SINE MIR -102 160 12 24 0 0 0 chr5 104280770 104280794 -95349356 + AT_rich Low_complexity Low_complexity 1 24 0 4745 46 0 2 chr5 104281225 104281809 -95348341 - L1PA4 LINE L1 -1 6154 5572 961 278 45 21 chr5 104282188 104282569 -95347581 - L1M4 LINE L1 -875 5271 4882 6421 31 0 8 chr5 104282674 104283442 -95346708 - L1PA3 LINE L1 -7 6148 5387 519 84 0 0 chr5 104283832 104283903 -95346247 - L1PA5 LINE L1 -2 6152 6082 2245 105 0 10 chr5 104283983 104284297 -95345853 - AluSx SINE Alu -1 311 1 960 126 0 35 chr5 104284707 104285083 -95345067 + (TA)n Simple_repeat Simple_repeat 1 362 0 24 0 0 0 chr5 104285766 104285790 -95344360 + AT_rich Low_complexity Low_complexity 1 24 0 253 259 17 0 chr5 104287197 104287255 -95342895 + MER69 DNA AcHobo 26 84 -93 337 266 211 0 chr5 104287275 104287403 -95342747 + MER5A DNA MER1_type 35 189 0 258 281 56 34 chr5 104287748 104287837 -95342313 + Charlie8 DNA MER1_type 1 91 -2326 748 276 74 21 chr5 104287989 104288232 -95341918 - MIR SINE MIR -3 259 4 23 33 0 0 chr5 104288757 104288787 -95341363 + AT_rich Low_complexity Low_complexity 1 30 0 1715 171 31 11 chr5 104288850 104289202 -95340948 - L1MA4 LINE L1 -6 6294 5936 3059 155 30 4 chr5 104289202 104289740 -95340410 - L1PA15 LINE L1 -6 6159 5604 344 175 0 0 chr5 104289741 104289804 -95340346 - L1PA15 LINE L1 -33 6132 6070 315 94 0 38 chr5 104289797 104289850 -95340300 - L1MA4 LINE L1 -602 5702 5652 * 391 341 16 0 chr5 104290043 104290169 -95339981 + LTR16C LTR ERVL 69 196 -295 256 318 151 24 chr5 104290687 104290813 -95339337 + L2 LINE L2 2832 2973 -341 * 684 275 67 99 chr5 104290810 104291407 -95338743 - L2 LINE L2 -1 3312 2736 * 788 249 97 55 chr5 104291402 104291732 -95338418 + L2 LINE L2 2966 3309 -4 563 375 62 8 chr5 104291739 104292096 -95338054 - L2 LINE L2 -2095 1219 844 21 57 0 0 chr5 104294027 104294062 -95336088 + AT_rich Low_complexity Low_complexity 1 35 0 1778 165 19 10 chr5 104294385 104294694 -95335456 - AluJb SINE Alu 0 312 1 2243 83 42 0 chr5 104295167 104295455 -95334695 - AluSx SINE Alu -12 300 1 1989 139 13 3 chr5 104298553 104298862 -95331288 + AluSx SINE Alu 1 312 0 1734 162 60 0 chr5 104299201 104299485 -95330665 + AluSq SINE Alu 1 301 -12 718 199 38 0 chr5 104299823 104300009 -95330141 - L1MA3 LINE L1 -2 6303 6111 2038 180 17 19 chr5 104301952 104302363 -95327787 + MSTA LTR MaLR 19 428 0 1376 217 0 25 chr5 104302615 104302901 -95327249 - AluJb SINE Alu -33 279 1 519 244 30 30 chr5 104302901 104303036 -95327114 - LTR64 LTR ERVK -19 539 405 24 0 0 0 chr5 104303070 104303094 -95327056 + AT_rich Low_complexity Low_complexity 1 24 0 201 231 0 46 chr5 104303437 104303502 -95326648 + A-rich Low_complexity Low_complexity 4 65 0 267 241 14 36 chr5 104304118 104304206 -95325944 + MLT1J LTR MaLR 64 144 -306 323 184 64 55 chr5 104304331 104304440 -95325710 + LTR33A LTR ERVL 407 516 -7 21 0 0 0 chr5 104304768 104304789 -95325361 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr5 104304842 104304886 -95325264 + AT_rich Low_complexity Low_complexity 1 44 0 1773 44 4 0 chr5 104306090 104306317 -95323833 - L1PA4 LINE L1 0 6155 5928 473 261 6 13 chr5 104306401 104306558 -95323592 - L1MD2 LINE L1 -10 6349 6194 531 244 77 18 chr5 104306571 104306739 -95323411 - L1MD2 LINE L1 -218 6141 5964 2314 72 7 3 chr5 104307153 104307444 -95322706 + AluSp SINE Alu 3 294 -19 1358 96 0 0 chr5 104307506 104307694 -95322456 - L1PB1 LINE L1 -2 6149 5962 504 157 25 35 chr5 104307734 104307910 -95322240 + (TA)n Simple_repeat Simple_repeat 2 177 -18 1987 140 14 0 chr5 104307910 104308202 -95321948 + AluSx SINE Alu 2 297 -15 504 157 25 35 chr5 104308202 104308221 -95321929 + (TA)n Simple_repeat Simple_repeat 177 195 0 421 125 14 0 chr5 104308284 104308356 -95321794 - L1MB5 LINE L1 -8 6166 6094 338 309 67 62 chr5 104308447 104308852 -95321298 + MLT1H1 LTR MaLR 95 518 -37 21 0 0 0 chr5 104309602 104309623 -95320527 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 104309820 104309844 -95320306 + AT_rich Low_complexity Low_complexity 1 24 0 355 261 39 0 chr5 104310085 104310215 -95319935 - L1ME4a LINE L1 -244 5877 5743 3443 229 106 75 chr5 104310387 104311664 -95318486 - Zaphod DNA AcHobo -4 3992 2757 1365 148 4 0 chr5 104311664 104311894 -95318256 + L1MA7 LINE L1 6061 6291 0 3443 229 106 75 chr5 104311894 104312607 -95317543 - Zaphod DNA AcHobo -1239 2757 539 10506 34 1 0 chr5 104312635 104314666 -95315484 - L1PA3 LINE L1 -4 6151 4119 7629 24 1 0 chr5 104314668 104315723 -95314427 + L1PA3 LINE L1 5100 6155 0 2134 114 26 20 chr5 104315834 104316186 -95313964 + L1PA14 LINE L1 5808 6161 0 773 223 0 13 chr5 104316458 104316635 -95313515 + FRAM SINE Alu 1 166 0 210 167 0 0 chr5 104316921 104316957 -95313193 + (TA)n Simple_repeat Simple_repeat 2 37 0 361 85 0 0 chr5 104316958 104317005 -95313145 - Alu SINE Alu -8 294 248 25 0 0 0 chr5 104317841 104317866 -95312284 + AT_rich Low_complexity Low_complexity 1 25 0 28 29 0 0 chr5 104318124 104318159 -95311991 + AT_rich Low_complexity Low_complexity 1 35 0 1969 219 80 10 chr5 104321031 104321694 -95308456 - L1MCb LINE L1 -4853 1192 754 260 319 18 9 chr5 104321683 104321796 -95308354 - L1ME4a LINE L1 -511 5659 5546 * 205 373 91 16 chr5 104322349 104322601 -95307549 - L3 LINE CR1 -7 1570 1300 1745 243 38 7 chr5 104326937 104327356 -95302794 - MLT1C LTR MaLR 0 467 36 3451 222 77 50 chr5 104327432 104327709 -95302441 - MLT1C-int LTR MaLR -13 1358 1090 2019 131 0 10 chr5 104327709 104328007 -95302143 - AluSx SINE Alu -17 295 1 3451 222 77 50 chr5 104328007 104328617 -95301533 - MLT1C-int LTR MaLR -281 1090 310 1808 179 0 0 chr5 104328617 104328902 -95301248 + AluJb SINE Alu 3 287 -25 3451 222 77 50 chr5 104328902 104329198 -95300952 - MLT1C-int LTR MaLR -1061 310 23 673 193 33 20 chr5 104329227 104329377 -95300773 - MLT1C LTR MaLR -315 152 1 1297 256 69 32 chr5 104330998 104331560 -95298590 - MER69 DNA AcHobo -28 2498 1916 1069 156 9 165 chr5 104331829 104332162 -95297988 - AluJo SINE Alu -31 281 1 233 328 61 8 chr5 104332313 104332444 -95297706 - MER69 DNA AcHobo -2171 355 218 1496 187 62 63 chr5 104332467 104332984 -95297166 - MER67C LTR ERV1 -28 486 1 306 373 162 16 chr5 104333230 104333680 -95296470 + L2 LINE L2 2451 2966 -348 225 283 11 22 chr5 104333739 104333831 -95296319 - L1ME4a LINE L1 -746 5416 5326 25 0 0 0 chr5 104333970 104333995 -95296155 + AT_rich Low_complexity Low_complexity 1 25 0 211 343 45 0 chr5 104334313 104334380 -95295770 - L2 LINE L2 -23 3290 3221 210 164 0 0 chr5 104334457 104334512 -95295638 + (TA)n Simple_repeat Simple_repeat 2 56 0 2138 274 144 119 chr5 104334541 104337016 -95293134 - L2 LINE L2 -685 2629 92 361 370 0 15 chr5 104337405 104337540 -95292610 + MIR SINE MIR 12 144 -118 8235 193 9 4 chr5 104337540 104339155 -95290995 - L1PA14 LINE L1 -949 5197 3575 1273 119 36 0 chr5 104339151 104339419 -95290731 + L1PA14 LINE L1 5193 5470 -691 * 3967 129 18 18 chr5 104339419 104340102 -95290048 - L1PA13 LINE L1 -5 6158 5476 4382 128 12 0 chr5 104340106 104340795 -95289355 + L1PA14 LINE L1 5460 6156 -5 249 305 93 25 chr5 104340865 104340983 -95289167 - MIR SINE MIR -19 243 118 291 266 0 0 chr5 104341324 104341403 -95288747 - L1MC4 LINE L1 -1340 6702 6624 213 39 0 0 chr5 104341403 104341429 -95288721 + (TG)n Simple_repeat Simple_repeat 2 27 0 27 0 0 0 chr5 104341694 104341721 -95288429 + AT_rich Low_complexity Low_complexity 1 27 0 388 311 194 10 chr5 104341956 104342162 -95287988 + MIR SINE MIR 3 246 -16 209 314 86 37 chr5 104342628 104342849 -95287301 - MIR SINE MIR -20 242 5 29 0 0 0 chr5 104343784 104343813 -95286337 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 104344517 104344540 -95285610 + AT_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr5 104345236 104345273 -95284877 + AT_rich Low_complexity Low_complexity 1 37 0 365 331 74 7 chr5 104347038 104347186 -95282964 + L3 LINE CR1 1129 1286 -291 22 56 0 0 chr5 104347358 104347394 -95282756 + AT_rich Low_complexity Low_complexity 1 36 0 41 66 0 0 chr5 104348130 104348206 -95281944 + AT_rich Low_complexity Low_complexity 1 76 0 31 76 0 0 chr5 104349808 104349874 -95280276 + AT_rich Low_complexity Low_complexity 1 66 0 43711 43 1 1 chr5 104350579 104356735 -95273415 - L1PA4 LINE L1 -3 6152 1 183 284 54 68 chr5 104357313 104357387 -95272763 + MIR SINE MIR 169 241 -21 22 0 0 0 chr5 104357670 104357692 -95272458 + AT_rich Low_complexity Low_complexity 1 22 0 288 29 0 0 chr5 104358350 104358384 -95271766 + MER57A LTR ERV1 1 34 -369 * 635 162 17 17 chr5 104358376 104358493 -95271657 + MER57B LTR ERV1 318 434 0 213 335 116 17 chr5 104359168 104359341 -95270809 - MIR SINE MIR -71 191 2 328 299 0 30 chr5 104359973 104360137 -95270013 + (CATATA)n Simple_repeat Simple_repeat 3 161 0 267 79 0 0 chr5 104360138 104360176 -95269974 + (CA)n Simple_repeat Simple_repeat 1 38 0 267 284 0 14 chr5 104360382 104360456 -95269694 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 408 330 20 35 chr5 104360461 104360674 -95269476 - MLT2B1 LTR ERVL -63 491 276 724 290 37 37 chr5 104360853 104361285 -95268865 + MLT1H LTR MaLR 3 549 0 1808 141 30 69 chr5 104361650 104361984 -95268166 + MER1B DNA MER1_type 19 339 0 238 273 0 13 chr5 104363375 104363452 -95266698 + LTR33A LTR ERVL 446 521 -2 310 343 75 33 chr5 104363496 104363709 -95266441 - L2 LINE L2 -453 2861 2640 7621 203 28 14 chr5 104364397 104366548 -95263602 + L1PA16 LINE L1 3576 5756 -410 2771 156 109 25 chr5 104366548 104367114 -95263036 - LTR18B LTR ERVL 0 614 1 7621 203 28 14 chr5 104367114 104367279 -95262871 + L1PA16 LINE L1 5756 5917 -249 201 361 49 16 chr5 104367498 104367620 -95262530 + MER5B DNA MER1_type 12 137 -41 1297 180 113 84 chr5 104368069 104368282 -95261868 + MSTA LTR MaLR 1 206 -222 294 29 0 0 chr5 104368282 104368317 -95261833 + (TC)n Simple_repeat Simple_repeat 1 35 0 1297 180 113 84 chr5 104368317 104368519 -95261631 + MSTA LTR MaLR 206 428 0 7430 157 34 62 chr5 104368523 104370145 -95260005 + MSTA-int LTR MaLR 5 1580 0 1148 197 210 10 chr5 104370152 104370452 -95259698 + MSTA LTR MaLR 8 367 -61 2189 108 0 3 chr5 104370944 104371241 -95258909 - AluSq SINE Alu -17 296 1 243 380 62 16 chr5 104371303 104371561 -95258589 + L2 LINE L2 2200 2469 -845 200 430 0 7 chr5 104371790 104371925 -95258225 + L2 LINE L2 2946 3079 -193 1618 244 59 24 chr5 104372178 104372687 -95257463 + MER90 LTR ERV1 7 533 -81 243 0 0 0 chr5 104372783 104372810 -95257340 + (CA)n Simple_repeat Simple_repeat 2 28 0 252 302 35 12 chr5 104372914 104373000 -95257150 - MIR SINE MIR -51 211 124 200 333 88 20 chr5 104373637 104373739 -95256411 + L2 LINE L2 3190 3298 -15 820 213 153 60 chr5 104373989 104374395 -95255755 + MER39 LTR ERV1 20 593 -114 237 258 56 34 chr5 104374399 104374488 -95255662 + MER34C LTR ERV1 495 585 0 211 343 45 0 chr5 104375438 104375505 -95254645 + L2 LINE L2 3221 3290 -23 25 0 0 0 chr5 104375824 104375849 -95254301 + AT_rich Low_complexity Low_complexity 1 25 0 294 384 171 11 chr5 104376139 104376496 -95253654 - L2 LINE L2 -348 2966 2553 1285 259 70 30 chr5 104376624 104377185 -95252965 + MER69 DNA AcHobo 1916 2498 -28 469 141 0 13 chr5 104378501 104378579 -95251571 + AluJb SINE Alu 57 133 -179 415 161 92 23 chr5 104378928 104379015 -95251135 - AluSg/x SINE Alu -23 287 195 1308 110 0 0 chr5 104379015 104379188 -95250962 + AluSg/x SINE Alu 139 311 -1 12826 35 0 1 chr5 104379301 104380866 -95249284 + L1P LINE L1 1481 3044 -3102 278 270 11 108 chr5 104381016 104381201 -95248949 - L2 LINE L2 0 3313 3147 586 286 185 17 chr5 104381365 104381827 -95248323 - MLT1G1 LTR MaLR -6 543 1 285 293 120 23 chr5 104381832 104381965 -95248185 - MLT1G1-int LTR MaLR -6 1365 1220 429 219 8 21 chr5 104382019 104382129 -95248021 - MLT1G1 LTR MaLR -293 302 150 303 71 0 0 chr5 104382144 104382186 -95247964 + (CA)n Simple_repeat Simple_repeat 1 42 0 238 246 0 18 chr5 104382224 104382281 -95247869 - MLT1G1 LTR MaLR -491 64 9 376 185 8 101 chr5 104383440 104383559 -95246591 - MER3 DNA MER1_type 0 209 102 22 0 0 0 chr5 104383868 104383890 -95246260 + AT_rich Low_complexity Low_complexity 1 22 0 5700 28 0 0 chr5 104384226 104384898 -95245252 - L1P LINE L1 -1393 4753 4082 5415 30 7 0 chr5 104384886 104386002 -95244148 + L1PA3 LINE L1 4714 5839 -316 * 2844 13 0 0 chr5 104386444 104386762 -95243388 - AluYb8 SINE Alu 0 318 1 347 313 90 35 chr5 104386924 104387269 -95242881 - L1MEc LINE L1 -5219 1177 814 350 235 0 0 chr5 104387450 104387512 -95242638 - MER58A DNA MER1_type 0 224 163 441 293 0 0 chr5 104387512 104387618 -95242532 - MER58A DNA MER1_type 0 107 2 376 358 67 8 chr5 104388239 104388493 -95241657 + L1MC4a LINE L1 4448 4716 -1430 693 169 0 8 chr5 104388901 104389025 -95241125 - FLAM_C SINE Alu -20 123 1 464 288 130 27 chr5 104389352 104389651 -95240499 + L1MC4a LINE L1 5632 5961 -1847 472 292 155 0 chr5 104389982 104390143 -95240007 + MER5A DNA MER1_type 4 189 0 24 0 0 0 chr5 104390234 104390258 -95239892 + AT_rich Low_complexity Low_complexity 1 24 0 4076 154 43 58 chr5 104391113 104391682 -95238468 + L1PB4 LINE L1 5223 5799 -357 228 67 0 0 chr5 104391682 104391712 -95238438 + (CA)n Simple_repeat Simple_repeat 2 31 0 4076 154 43 58 chr5 104391712 104391866 -95238284 + L1PB4 LINE L1 5799 5954 -202 2043 107 0 4 chr5 104391866 104392177 -95237973 + AluSc SINE Alu 1 310 0 4076 154 43 58 chr5 104392177 104392395 -95237755 + L1PB4 LINE L1 5954 6154 -2 2247 99 0 0 chr5 104392478 104392771 -95237379 + AluSg SINE Alu 1 293 -17 211 274 0 0 chr5 104394534 104394585 -95235565 + (TG)n Simple_repeat Simple_repeat 2 52 0 1247 192 0 66 chr5 104394627 104394898 -95235252 + AluJb SINE Alu 1 253 -59 411 244 11 0 chr5 104395208 104395298 -95234852 - MER3 DNA MER1_type -118 91 1 195 162 0 0 chr5 104395392 104395429 -95234721 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 24 91 0 0 chr5 104395468 104395534 -95234616 + AT_rich Low_complexity Low_complexity 1 66 0 1002 175 24 14 chr5 104396645 104396856 -95233294 - L1MA4 LINE L1 0 6300 6088 2097 63 0 24 chr5 104397722 104398042 -95232108 - AluY SINE Alu 0 313 1 211 361 48 39 chr5 104398048 104398256 -95231894 + L2 LINE L2 2667 2876 -438 367 331 46 8 chr5 104398744 104398874 -95231276 + LTR16A LTR ERVL 34 168 -282 282 322 26 20 chr5 104398991 104399143 -95231007 + HERV16 LTR ERVL 3608 3760 -1236 2173 85 0 0 chr5 104399438 104399720 -95230430 - AluY SINE Alu -29 282 1 820 123 0 0 chr5 104400283 104400397 -95229753 - AluSg/x SINE Alu -8 301 188 2268 97 10 0 chr5 104400548 104400856 -95229294 + AluSp SINE Alu 3 313 0 25 0 0 0 chr5 104401774 104401799 -95228351 + AT_rich Low_complexity Low_complexity 1 25 0 210 287 181 0 chr5 104402002 104402096 -95228054 - MIR SINE MIR -84 178 68 501 253 165 22 chr5 104402114 104402283 -95227867 - L1MC5 LINE L1 -49 7912 7768 2420 121 8 6 chr5 104402283 104402646 -95227504 - THE1B LTR MaLR 0 364 1 501 253 165 22 chr5 104402646 104402876 -95227274 - L1MC5 LINE L1 -193 7768 7456 10211 233 45 29 chr5 104402927 104405683 -95224467 + L1 LINE L1 2258 5068 -1078 3986 77 8 0 chr5 104405683 104406206 -95223944 + L1PA6 LINE L1 5616 6142 -12 10211 233 45 29 chr5 104406206 104406395 -95223755 + L1 LINE L1 5068 5252 -894 8763 55 0 8 chr5 104406495 104407624 -95222526 - L1P LINE L1 -5021 1125 6 1136 216 132 51 chr5 104407739 104408138 -95222012 - MLT1E1 LTR MaLR 0 654 117 630 273 44 11 chr5 104408843 104409026 -95221124 + MLT1H LTR MaLR 359 547 -2 245 200 29 29 chr5 104409044 104409114 -95221036 + L1MCa LINE L1 1996 2065 -4361 29 78 0 0 chr5 104409782 104409846 -95220304 + AT_rich Low_complexity Low_complexity 1 64 0 21 57 0 0 chr5 104410510 104410545 -95219605 + AT_rich Low_complexity Low_complexity 1 35 0 312 120 0 0 chr5 104411003 104411053 -95219097 - L1MA4 LINE L1 -5 6295 6246 22 35 0 0 chr5 104411211 104411240 -95218910 + AT_rich Low_complexity Low_complexity 1 29 0 1739 167 28 0 chr5 104411241 104411528 -95218622 + L1M4c LINE L1 20 314 -6070 3024 201 60 12 chr5 104411536 104412356 -95217794 + L1M4c LINE L1 641 1499 -4885 490 138 11 0 chr5 104412356 104412443 -95217707 + L1M1 LINE L1 5706 5793 -510 2566 173 45 37 chr5 104412503 104413104 -95217046 + L1M4c LINE L1 1762 2367 -4017 1981 143 21 16 chr5 104413104 104413482 -95216668 + L1MB3 LINE L1 5800 6179 -4 1724 140 43 16 chr5 104413482 104413804 -95216346 + L1MA3 LINE L1 5627 5957 -348 255 344 113 25 chr5 104415683 104415843 -95214307 - MIR3 SINE MIR -1 207 34 2168 120 12 9 chr5 104416027 104416368 -95213782 + LTR19C LTR ERV1 1 342 -437 11010 186 34 41 chr5 104416376 104420472 -95209678 + HUERS-P3b LTR ERV1 3076 6994 -2 4654 111 45 44 chr5 104420476 104420658 -95209492 + LTR19C LTR ERV1 1 181 -598 2622 26 3 0 chr5 104420658 104420964 -95209186 + AluY SINE Alu 1 307 -4 4654 111 45 44 chr5 104420964 104421559 -95208591 + LTR19C LTR ERV1 181 779 0 363 129 0 0 chr5 104421779 104421841 -95208309 - HERV9 LTR ERV1 -8284 115 54 538 143 0 0 chr5 104421857 104421941 -95208209 - LTR12 LTR ERV1 -130 584 501 746 131 28 71 chr5 104422236 104422462 -95207688 + LTR12 LTR ERV1 1 277 -437 311 214 0 36 chr5 104422462 104422546 -95207604 + LTR30 LTR ERV1 544 624 -98 703 171 34 0 chr5 104422546 104422663 -95207487 + LTR12 LTR ERV1 362 482 -232 196 371 0 14 chr5 104423058 104423128 -95207022 - L2 LINE L2 -75 3197 3129 2147 121 0 0 chr5 104423583 104423888 -95206262 + AluSg SINE Alu 1 305 -5 345 100 0 0 chr5 104424683 104424733 -95205417 + (TCCC)n Simple_repeat Simple_repeat 4 53 0 223 270 0 0 chr5 104424738 104424801 -95205349 + T-rich Low_complexity Low_complexity 1 63 0 746 283 158 7 chr5 104427182 104427614 -95202536 + LTR50 LTR ERVL 74 653 -142 288 179 36 0 chr5 104427758 104427814 -95202336 + MER94 DNA DNA 77 134 0 221 277 15 15 chr5 104428052 104428117 -95202033 + L2 LINE L2 2693 2757 -557 213 421 68 0 chr5 104428249 104428382 -95201768 + L2 LINE L2 3116 3257 -15 22 35 0 0 chr5 104429771 104429800 -95200350 + AT_rich Low_complexity Low_complexity 1 29 0 486 91 0 11 chr5 104429848 104429936 -95200214 - L1PA13 LINE L1 -3 6160 6074 455 374 137 20 chr5 104430191 104430635 -95199515 + L2 LINE L2 2338 2833 -481 186 111 0 0 chr5 104430906 104430933 -95199217 + MIR SINE MIR 115 141 -67 24 85 0 0 chr5 104431164 104431223 -95198927 + AT_rich Low_complexity Low_complexity 1 59 0 28 61 0 0 chr5 104431251 104431300 -95198850 + AT_rich Low_complexity Low_complexity 1 49 0 182 375 62 18 chr5 104432217 104432329 -95197821 + MIR SINE MIR 10 126 -136 2287 229 16 32 chr5 104432614 104433177 -95196973 + MLT2B3 LTR ERVL 1 554 0 331 232 0 0 chr5 104434055 104434137 -95196013 + L1MC4a LINE L1 5398 5479 -2329 496 324 44 31 chr5 104434179 104434497 -95195653 + L1MC4a LINE L1 5620 5941 -1867 1445 225 41 12 chr5 104434926 104435264 -95194886 + MSTB1 LTR MaLR 84 431 -1 282 436 40 26 chr5 104435272 104435545 -95194605 + L2 LINE L2 2949 3225 -47 265 259 49 25 chr5 104435643 104435724 -95194426 + L1ME4a LINE L1 5508 5590 -531 201 323 0 0 chr5 104435724 104435786 -95194364 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 301 337 66 18 chr5 104435889 104436055 -95194095 + L1ME4a LINE L1 5718 5891 -230 2140 145 0 0 chr5 104436581 104436892 -95193258 + AluSx SINE Alu 1 311 -1 295 343 28 37 chr5 104437366 104437474 -95192676 + L2 LINE L2 3164 3270 -2 316 162 60 8 chr5 104437782 104437899 -95192251 + (TA)n Simple_repeat Simple_repeat 2 124 0 238 198 22 22 chr5 104438158 104438249 -95191901 + (TATAA)n Simple_repeat Simple_repeat 3 93 0 2708 10 0 0 chr5 104438719 104439019 -95191131 - AluYa5 SINE Alu -11 300 1 2087 242 93 15 chr5 104439060 104439671 -95190479 - MER76 LTR ERV -29 659 1 22 0 0 0 chr5 104440733 104440755 -95189395 + AT_rich Low_complexity Low_complexity 1 22 0 324 0 0 0 chr5 104441884 104441920 -95188230 + (TC)n Simple_repeat Simple_repeat 2 37 0 267 31 0 0 chr5 104441919 104441951 -95188199 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 204 97 0 0 chr5 104443004 104443035 -95187115 + (TG)n Simple_repeat Simple_repeat 2 32 0 4703 197 26 4 chr5 104444144 104445127 -95185023 - L1M2 LINE L1 -1781 4365 3361 4598 181 23 23 chr5 104445122 104446224 -95183926 + L1M2 LINE L1 4357 5468 -743 * 29 0 0 0 chr5 104448026 104448055 -95182095 + AT_rich Low_complexity Low_complexity 1 29 0 386 343 93 40 chr5 104448258 104448655 -95181495 - L3 LINE CR1 -712 865 448 39 0 0 0 chr5 104449008 104449047 -95181103 + AT_rich Low_complexity Low_complexity 1 39 0 217 240 0 0 chr5 104449152 104449202 -95180948 + L3 LINE CR1 646 695 -882 22 0 0 0 chr5 104449287 104449309 -95180841 + AT_rich Low_complexity Low_complexity 1 22 0 17901 36 3 0 chr5 104451190 104454138 -95176012 - L1PA3 LINE L1 -1 6154 3198 6041 130 29 7 chr5 104454238 104455384 -95174766 + L1PB1 LINE L1 4977 6147 -4 22 70 0 0 chr5 104455988 104456031 -95174119 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr5 104456063 104456088 -95174062 + AT_rich Low_complexity Low_complexity 1 25 0 597 319 32 19 chr5 104456748 104456964 -95173186 - MIR SINE MIR -3 259 41 1464 55 21 1 chr5 104458127 104458325 -95171825 - L1PA3 LINE L1 -259 5896 5717 2298 29 0 4 chr5 104458325 104458595 -95171555 + L1PA3 LINE L1 5881 6155 0 3389 135 2 16 chr5 104459328 104459845 -95170305 - MER1A DNA MER1_type -19 510 1 444 229 10 0 chr5 104460172 104460268 -95169882 - MER81 DNA DNA -3 111 15 232 200 0 55 chr5 104460899 104460954 -95169196 - MIR3 SINE MIR -6 202 151 328 355 0 0 chr5 104461046 104461170 -95168980 + MIR3 SINE MIR 67 190 -18 249 191 32 16 chr5 104462494 104462557 -95167593 - HsTC2 DNA Tc2 -1833 65 2 1521 132 4 4 chr5 104464019 104464284 -95165866 - L1MA5A LINE L1 -3 6294 6030 * 7350 42 4 0 chr5 104464282 104465769 -95164381 - L1PA4 LINE L1 0 6155 4666 1237 63 0 0 chr5 104465770 104465928 -95164222 + L1P LINE L1 4475 4632 -1514 * 1459 157 0 36 chr5 104465923 104466197 -95163953 - L1MA5 LINE L1 -255 6045 5782 304 256 24 12 chr5 104466197 104466279 -95163871 + (TATG)n Simple_repeat Simple_repeat 2 84 0 249 67 0 0 chr5 104466279 104466324 -95163826 + LTR66 LTR ERVL 394 438 -172 1613 219 29 6 chr5 104466523 104466870 -95163280 - MLT1A1 LTR MaLR 0 365 11 3113 225 64 55 chr5 104466881 104467267 -95162883 - MLT1A1-int LTR MaLR -1 1370 989 1752 191 0 0 chr5 104467267 104467566 -95162584 - AluSx SINE Alu -13 299 1 3113 225 64 55 chr5 104467566 104468460 -95161690 - MLT1A1-int LTR MaLR -382 989 16 741 187 40 14 chr5 104468460 104468736 -95161414 - MLT1A1 LTR MaLR -2 426 1 2469 89 0 0 chr5 104469040 104469353 -95160797 + AluSq SINE Alu 1 313 0 30 0 0 0 chr5 104469831 104469861 -95160289 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr5 104470123 104470162 -95159988 + AT_rich Low_complexity Low_complexity 1 39 0 302 265 20 20 chr5 104471121 104471219 -95158931 + MER88 LTR ERVL 79 176 -288 * 1182 275 77 26 chr5 104471137 104471592 -95158558 - MER74B LTR ERVL -75 547 70 411 261 63 28 chr5 104472156 104472298 -95157852 - HERV16 LTR ERVL -4291 705 559 3043 127 19 0 chr5 104472301 104472774 -95157376 - L1PA15 LINE L1 -3 6162 5681 903 132 0 0 chr5 104472786 104472922 -95157228 - L1PA15 LINE L1 -13 6152 6017 267 374 27 14 chr5 104472954 104473173 -95156977 - HERV16 LTR ERVL -4445 551 330 636 344 91 10 chr5 104473497 104473904 -95156246 - LTR16A1 LTR ERVL -2 455 16 188 307 53 13 chr5 104474549 104474624 -95155526 - L2 LINE L2 -55 3258 3181 214 324 81 18 chr5 104474994 104475105 -95155045 - MIR SINE MIR -14 248 131 508 194 24 6 chr5 104475816 104475986 -95154164 + (TA)n Simple_repeat Simple_repeat 2 174 0 22 0 0 0 chr5 104479322 104479344 -95150806 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 104479354 104479379 -95150771 + AT_rich Low_complexity Low_complexity 1 25 0 199 278 153 0 chr5 104479942 104480014 -95150136 + L2 LINE L2 3188 3270 -2 517 185 11 0 chr5 104481441 104481533 -95148617 + L1PA14 LINE L1 6 98 -7483 5974 177 5 25 chr5 104481533 104483522 -95146628 + L1PA14 LINE L1 5609 7594 -5 272 345 12 0 chr5 104483850 104483934 -95146216 - L2 LINE L2 -1 3312 3228 1745 164 35 57 chr5 104483937 104484309 -95145841 - THE1B LTR MaLR 0 364 1 186 333 14 14 chr5 104484599 104484668 -95145482 - L2 LINE L2 -508 2806 2738 424 340 91 43 chr5 104484742 104484838 -95145312 - L2 LINE L2 -775 2539 2449 1129 272 83 3 chr5 104484838 104485176 -95144974 + MLT1A1 LTR MaLR 1 365 0 424 340 91 43 chr5 104485176 104485452 -95144698 - L2 LINE L2 -865 2449 2149 261 146 0 0 chr5 104485663 104485711 -95144439 + (TA)n Simple_repeat Simple_repeat 1 48 0 194 62 31 0 chr5 104485710 104485742 -95144408 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 * 21 0 0 0 chr5 104485884 104485905 -95144245 + AT_rich Low_complexity Low_complexity 1 21 0 6465 234 52 65 chr5 104485933 104488319 -95141831 + Charlie6 DNA MER1_type 150 2592 -908 449 271 77 13 chr5 104488319 104488474 -95141676 + L1ME3A LINE L1 36 200 -6196 1152 257 39 3 chr5 104488488 104488819 -95141331 + L1ME3A LINE L1 485 827 -5569 * 9359 183 20 3 chr5 104488816 104490639 -95139511 - L1P3 LINE L1 -1910 4551 2697 3408 200 32 21 chr5 104490633 104491542 -95138608 - L1P3 LINE L1 -4511 1940 1017 * 6331 106 1 8 chr5 104491542 104493468 -95136682 + L1PA12 LINE L1 4246 6168 0 3408 200 32 21 chr5 104493468 104493482 -95136668 - L1P3 LINE L1 -5434 1017 1005 733 283 155 5 chr5 104493471 104493870 -95136280 + L1ME3A LINE L1 814 1272 -5124 * 209 356 23 0 chr5 104493946 104494033 -95136117 + GA-rich Low_complexity Low_complexity 4 92 0 258 32 0 0 chr5 104494184 104494215 -95135935 + (TG)n Simple_repeat Simple_repeat 2 32 0 1011 256 34 3 chr5 104494288 104494612 -95135538 + L1ME3A LINE L1 4544 4877 -1338 2142 108 7 0 chr5 104495785 104496080 -95134070 - AluSg SINE Alu -13 297 1 359 229 110 77 chr5 104497404 104497621 -95132529 + HERVL66 LTR ERVL 868 3332 -2153 305 322 65 35 chr5 104498514 104498744 -95131406 + MER21-int LTR ERV1 2942 3178 -1013 788 311 59 13 chr5 104498847 104499306 -95130844 + L1ME3A LINE L1 5565 6044 -195 203 378 14 0 chr5 104499391 104499465 -95130685 - MIR SINE MIR -186 76 2 577 276 97 88 chr5 104499867 104500364 -95129786 - MLT1H1 LTR MaLR 0 555 55 3099 241 83 37 chr5 104501230 104501660 -95128490 + L1M4 LINE L1 8 417 -6125 180 0 0 0 chr5 104501660 104501680 -95128470 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 3099 241 83 37 chr5 104501680 104502214 -95127936 + L1M4 LINE L1 417 1016 -5526 1786 42 0 0 chr5 104502279 104502496 -95127654 - L1PA4 LINE L1 -2 6153 5937 1263 14 14 0 chr5 104502496 104502643 -95127507 + L1PA4 LINE L1 5785 5933 -222 619 238 8 0 chr5 104502643 104502769 -95127381 - FLAM_A SINE Alu -10 132 6 552 249 41 0 chr5 104502778 104502947 -95127203 - L1M4 LINE L1 -2392 3754 3579 * 1858 197 77 25 chr5 104502943 104503460 -95126690 + L1MB7 LINE L1 5628 6171 -13 1087 189 71 50 chr5 104503520 104503801 -95126349 - MER46B DNA MER2_type 0 236 75 8799 206 36 16 chr5 104503902 104505154 -95124996 - L1P LINE L1 -921 5225 3999 2163 94 20 7 chr5 104505154 104505453 -95124697 - AluSc SINE Alu -6 303 1 8799 206 36 16 chr5 104505453 104505705 -95124445 - L1P LINE L1 -2147 3999 3753 525 32 0 0 chr5 104505705 104505768 -95124382 + (TG)n Simple_repeat Simple_repeat 1 63 0 8799 206 36 16 chr5 104505768 104506291 -95123859 - L1P LINE L1 -2393 3753 3157 27 0 0 0 chr5 104506383 104506410 -95123740 + AT_rich Low_complexity Low_complexity 1 27 0 1438 232 3 0 chr5 104506411 104506704 -95123446 - AluJo SINE Alu -16 296 3 4500 122 44 4 chr5 104506949 104507671 -95122479 + L1PA16 LINE L1 5403 6153 -13 474 348 5 54 chr5 104507770 104507974 -95122176 - MLT1K LTR MaLR -313 275 82 1126 171 0 6 chr5 104508337 104508513 -95121637 - MLT1A2 LTR MaLR -11 363 189 205 191 48 0 chr5 104508540 104508603 -95121547 + T-rich Low_complexity Low_complexity 6 71 0 1434 83 14 19 chr5 104508609 104508825 -95121325 - AluY SINE Alu -23 288 74 192 286 0 0 chr5 104510107 104510156 -95119994 + MIR3 SINE MIR 154 202 -6 773 227 24 76 chr5 104561469 104561720 -95068430 - MLT1A1 LTR MaLR -120 245 8 1240 205 8 25 chr5 104561794 104562038 -95068112 + MER74C LTR ERVL 221 460 0 282 274 12 48 chr5 104562319 104562490 -95067660 + MLT1H LTR MaLR 47 179 -230 354 282 45 0 chr5 104562491 104562601 -95067549 + MER46A DNA MER2_type 1 115 -121 12225 93 5 5 chr5 104562705 104564396 -95065754 + Harlequin LTR ERV1 3265 4954 -3445 1168 124 72 66 chr5 104564389 104564737 -95065413 + Harlequin LTR ERV1 840 1189 -5707 * 341 258 11 48 chr5 104564739 104564925 -95065225 + (CATA)n Simple_repeat Simple_repeat 2 180 0 * 400 250 11 43 chr5 104564798 104564982 -95065168 + (TA)n Simple_repeat Simple_repeat 2 179 0 1005 158 48 0 chr5 104565135 104565300 -95064850 - LTR12 LTR ERV1 -228 486 314 38 0 0 0 chr5 104565300 104565338 -95064812 + AT_rich Low_complexity Low_complexity 1 38 0 2295 63 0 3 chr5 104565855 104566163 -95063987 + AluY SINE Alu 2 308 0 46 19 0 0 chr5 104566436 104566489 -95063661 + AT_rich Low_complexity Low_complexity 1 53 0 592 139 9 19 chr5 104568261 104568369 -95061781 + L1MA2 LINE L1 6194 6300 -4 189 0 0 0 chr5 104568686 104568707 -95061443 + (CA)n Simple_repeat Simple_repeat 2 22 0 691 252 0 0 chr5 104568779 104568938 -95061212 + MER89 LTR ERV1 167 325 -234 21 0 0 0 chr5 104571254 104571275 -95058875 + AT_rich Low_complexity Low_complexity 1 21 0 626 321 30 30 chr5 104571434 104571696 -95058454 - MLT1H1 LTR MaLR -288 267 6 186 328 0 0 chr5 104572641 104572702 -95057448 + L2 LINE L2 2309 2369 -945 2176 100 0 7 chr5 104573065 104573366 -95056784 - AluY SINE Alu -12 299 1 23 33 0 0 chr5 104574267 104574297 -95055853 + AT_rich Low_complexity Low_complexity 1 30 0 1792 102 4 8 chr5 104574451 104574705 -95055445 - AluSx SINE Alu -10 302 50 502 244 53 60 chr5 104577584 104577883 -95052267 + L1MDb LINE L1 1044 1340 -5203 3289 154 8 30 chr5 104577977 104578460 -95051690 + L1PA16 LINE L1 5558 6027 -139 2355 77 0 3 chr5 104578460 104578772 -95051378 + AluY SINE Alu 1 311 0 3289 154 8 30 chr5 104578772 104578878 -95051272 + L1PA16 LINE L1 6027 6134 -32 1369 243 22 31 chr5 104579081 104579530 -95050620 + L1MDb LINE L1 1595 2039 -4501 220 235 0 51 chr5 104580055 104580153 -95049997 + T-rich Low_complexity Low_complexity 2 94 0 498 242 34 7 chr5 104580162 104580180 -95049970 - L1MA10 LINE L1 0 6334 6317 475 247 107 29 chr5 104580180 104580423 -95049727 - L1ME3 LINE L1 -7 6155 5894 597 161 0 18 chr5 104580650 104580762 -95049388 - LTR1 LTR ERV1 -675 110 1 634 114 0 0 chr5 104580765 104580853 -95049297 - HUERS-P2 LTR ERV1 -4 3084 2997 757 198 6 6 chr5 104580855 104581017 -95049133 + L1P LINE L1 4972 5133 -1013 230 155 0 70 chr5 104581363 104581434 -95048716 + T-rich Low_complexity Low_complexity 4 69 0 26 0 0 0 chr5 104581595 104581621 -95048529 + AT_rich Low_complexity Low_complexity 1 26 0 594 361 121 12 chr5 104581716 104582145 -95048005 - L2 LINE L2 0 3313 2838 34 55 0 0 chr5 104582149 104582204 -95047946 + AT_rich Low_complexity Low_complexity 1 55 0 254 329 37 12 chr5 104582807 104582889 -95047261 - MIR SINE MIR -158 104 21 4580 176 76 20 chr5 104582988 104584074 -95046076 + L1MC1 LINE L1 5188 6333 0 21 36 0 0 chr5 104584138 104584166 -95045984 + AT_rich Low_complexity Low_complexity 1 28 0 27 49 0 0 chr5 104584358 104584399 -95045751 + AT_rich Low_complexity Low_complexity 1 41 0 306 335 159 26 chr5 104585292 104585519 -95044631 - L1MEd LINE L1 -5446 673 417 1903 191 65 31 chr5 104585859 104586273 -95043877 + MSTA LTR MaLR 1 428 0 262 302 31 10 chr5 104586300 104586396 -95043754 - L1M4 LINE L1 -2034 4112 4015 * 403 255 35 0 chr5 104586395 104586536 -95043614 - L1MEc LINE L1 -4387 2009 1864 2103 110 7 3 chr5 104586551 104586852 -95043298 - AluSc SINE Alu -7 302 1 4550 76 80 2 chr5 104588309 104588944 -95041206 + LTR12 LTR ERV1 3 687 -1 29 60 0 0 chr5 104589134 104589184 -95040966 + AT_rich Low_complexity Low_complexity 1 50 0 1792 90 4 0 chr5 104589311 104589545 -95040605 + AluY SINE Alu 66 300 -11 31 26 0 0 chr5 104590022 104590060 -95040090 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 104590422 104590452 -95039698 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 104590558 104590580 -95039570 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr5 104590634 104590663 -95039487 + AT_rich Low_complexity Low_complexity 1 29 0 1959 89 99 0 chr5 104592687 104592969 -95037181 + AluY SINE Alu 1 310 -1 2762 13 0 3 chr5 104594214 104594716 -95035434 - L1P1 LINE L1 -577 5578 5078 2632 16 3 3 chr5 104594716 104595026 -95035124 + L1PA3 LINE L1 5845 6155 0 198 330 57 45 chr5 104596508 104596596 -95033554 - L2 LINE L2 -2 3311 3223 288 205 39 0 chr5 104596996 104597074 -95033076 - LTR37A LTR ERV1 -19 407 327 6300 206 46 78 chr5 104597135 104598947 -95031203 - MER52A LTR ERV1 0 1755 1 882 237 0 0 chr5 104599116 104599293 -95030857 - AluJb SINE Alu -2 310 134 640 234 159 4 chr5 104599293 104599520 -95030630 - LTR37B LTR ERV1 -4 464 203 2187 78 10 10 chr5 104600054 104600347 -95029803 - AluY SINE Alu -18 293 1 21 0 0 0 chr5 104602761 104602782 -95027368 + AT_rich Low_complexity Low_complexity 1 21 0 257 259 0 62 chr5 104603144 104603225 -95026925 + MLT1L LTR MaLR 236 311 -304 1740 138 46 87 chr5 104603597 104603988 -95026162 + THE1C LTR MaLR 1 375 0 480 18 0 0 chr5 104604089 104604146 -95026004 + (TG)n Simple_repeat Simple_repeat 2 58 0 304 275 66 73 chr5 104604285 104604587 -95025563 + L1MCc LINE L1 21 320 -6103 956 275 51 61 chr5 104604594 104605343 -95024807 + L1MCc LINE L1 2560 3265 -3676 1393 263 27 18 chr5 104605445 104605886 -95024264 + L1MCc LINE L1 3268 3712 -3229 21 0 0 0 chr5 104607659 104607680 -95022470 + AT_rich Low_complexity Low_complexity 1 21 0 1416 210 49 136 chr5 104607757 104608208 -95021942 - L1MD3 LINE L1 -10 7985 7605 1786 179 0 0 chr5 104608208 104608516 -95021634 - AluJb SINE Alu -4 308 1 1416 210 49 136 chr5 104608516 104608702 -95021448 - L1MD3 LINE L1 -390 7605 7404 431 212 0 12 chr5 104608702 104608787 -95021363 - MLT1F1 LTR MaLR -442 125 42 691 239 21 16 chr5 104608819 104609007 -95021143 - L1MD3 LINE L1 -715 7280 7092 766 265 61 11 chr5 104609016 104609312 -95020838 - L1MC3 LINE L1 -923 6862 6609 290 250 0 0 chr5 104609313 104609377 -95020773 + (TATATG)n Simple_repeat Simple_repeat 1 64 0 544 240 175 42 chr5 104609389 104609738 -95020412 + MER57A LTR ERV1 65 394 -9 2041 131 0 0 chr5 104611152 104611443 -95018707 - AluSx SINE Alu -21 291 1 189 311 94 38 chr5 104611782 104611888 -95018262 - L2 LINE L2 -5 3267 3156 922 95 22 0 chr5 104613155 104613292 -95016858 - L1MA4A LINE L1 -5 6298 6159 495 0 0 0 chr5 104613670 104613725 -95016425 + (TA)n Simple_repeat Simple_repeat 2 56 0 418 321 10 56 chr5 104614085 104614281 -95015869 + MIR3 SINE MIR 21 207 -1 587 200 23 79 chr5 104614320 104614551 -95015599 - MER69 DNA AcHobo 0 2526 2 1714 131 0 7 chr5 104615924 104616199 -95013951 + L1PB1 LINE L1 5876 6148 -3 2833 140 5 5 chr5 104617111 104617560 -95012590 + L1PA16 LINE L1 5709 6157 -9 619 267 56 0 chr5 104618390 104618570 -95011580 + MER63A DNA MER1_type 1 190 -20 3158 32 2 0 chr5 104619428 104619987 -95010163 - L1PA5 LINE L1 -588 5566 5007 4778 47 3 0 chr5 104619987 104620567 -95009583 + L1PA5 LINE L1 5570 6152 -2 2881 246 51 56 chr5 104620637 104621920 -95008230 + L1M4 LINE L1 2974 4250 -1896 1307 271 32 15 chr5 104621948 104622354 -95007796 + L1PA12 LINE L1 3 415 -7166 2132 311 67 65 chr5 104622394 104623893 -95006257 + L1PA12 LINE L1 555 2080 -5501 * 4810 185 43 20 chr5 104623888 104625554 -95004596 + L1M1 LINE L1 3043 4751 -2814 345 198 37 0 chr5 104625559 104625640 -95004510 + L1M1 LINE L1 5823 5906 -1659 21 89 0 0 chr5 104625859 104625915 -95004235 + AT_rich Low_complexity Low_complexity 1 56 0 889 266 153 26 chr5 104626060 104626529 -95003621 - L1ME3 LINE L1 0 6162 5634 709 191 27 21 chr5 104626530 104626718 -95003432 - MER53 DNA DNA 0 189 1 463 262 41 9 chr5 104627022 104627243 -95002907 - L1ME3 LINE L1 -1552 4594 4367 353 267 0 0 chr5 104627382 104627457 -95002693 + L2 LINE L2 3228 3302 -11 203 313 55 55 chr5 104628038 104628166 -95001984 + L3 LINE CR1 1293 1420 -157 601 224 22 38 chr5 104629729 104629912 -95000238 - L1MD3 LINE L1 -13 7982 7803 1589 188 27 3 chr5 104630722 104631052 -94999098 - L1MA3 LINE L1 -2 6303 5966 562 221 50 43 chr5 104631249 104631389 -94998761 - MER92C LTR ERV1 -3 551 411 599 215 0 30 chr5 104631549 104631684 -94998466 - MER92C LTR ERV1 -169 385 255 2163 109 87 52 chr5 104631692 104632036 -94998114 + MSTA LTR MaLR 1 362 -66 189 0 0 0 chr5 104632036 104632057 -94998093 + (TG)n Simple_repeat Simple_repeat 2 22 0 2163 109 87 52 chr5 104632057 104632115 -94998035 + MSTA LTR MaLR 362 417 -11 2251 63 0 10 chr5 104633461 104633762 -94996388 - AluY SINE Alu -13 298 1 543 134 98 0 chr5 104635459 104635571 -94994579 + Charlie5 DNA MER1_type 2 124 -2488 1363 198 99 0 chr5 104635573 104635927 -94994223 + Charlie5 DNA MER1_type 2236 2624 0 354 290 68 68 chr5 104636226 104636536 -94993614 + L1MC4a LINE L1 5593 5902 -1906 24 32 0 0 chr5 104636563 104636594 -94993556 + AT_rich Low_complexity Low_complexity 1 31 0 27 81 0 0 chr5 104636692 104636754 -94993396 + AT_rich Low_complexity Low_complexity 1 62 0 28 0 0 0 chr5 104636800 104636828 -94993322 + AT_rich Low_complexity Low_complexity 1 28 0 712 181 0 15 chr5 104637058 104637191 -94992959 + FLAM_C SINE Alu 3 133 0 26 0 0 0 chr5 104637636 104637662 -94992488 + AT_rich Low_complexity Low_complexity 1 26 0 23 54 0 0 chr5 104637826 104637863 -94992287 + AT_rich Low_complexity Low_complexity 1 37 0 25 65 0 0 chr5 104639164 104639210 -94990940 + AT_rich Low_complexity Low_complexity 1 46 0 13768 26 0 2 chr5 104639745 104642197 -94987953 + L1PA2 LINE L1 3727 6155 0 657 264 61 32 chr5 104642865 104643111 -94987039 - ERVL LTR ERVL -267 5497 5245 848 304 89 20 chr5 104643146 104643550 -94986600 - ERVL LTR ERVL -706 5058 4627 1822 322 54 26 chr5 104643629 104644734 -94985416 - ERVL LTR ERVL -1092 4393 3236 1259 299 95 31 chr5 104645096 104645684 -94984466 + MLT1E2 LTR MaLR 1 626 0 498 149 0 43 chr5 104645789 104645883 -94984267 - Tigger4(Zombi) DNA MER2_type 0 2731 2642 551 338 35 56 chr5 104646611 104647037 -94983113 + MLT1K LTR MaLR 143 559 -29 24 32 0 0 chr5 104647608 104647639 -94982511 + AT_rich Low_complexity Low_complexity 1 31 0 1559 194 21 4 chr5 104648020 104648299 -94981851 - AluJo SINE Alu -26 286 3 24 32 0 0 chr5 104649777 104649808 -94980342 + AT_rich Low_complexity Low_complexity 1 31 0 266 326 43 28 chr5 104650136 104650277 -94979873 + L1ME LINE L1 2 144 -5926 23 86 0 0 chr5 104652299 104652357 -94977793 + AT_rich Low_complexity Low_complexity 1 58 0 249 333 13 0 chr5 104652810 104652888 -94977262 + L2 LINE L2 3235 3313 0 203 59 0 29 chr5 104653333 104653367 -94976783 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 3900 28 0 0 chr5 104653367 104653825 -94976325 - L1PA3 LINE L1 -24 6131 5674 682 319 127 3 chr5 104654368 104654691 -94975459 - L2 LINE L2 -461 2853 2491 325 276 9 29 chr5 104654716 104654821 -94975329 - MLT1K LTR MaLR -485 103 1 3232 151 39 29 chr5 104655542 104655870 -94974280 + Tigger3b DNA MER2_type 7 345 -2683 180 0 0 0 chr5 104655870 104655890 -94974260 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3232 151 39 29 chr5 104655890 104656185 -94973965 + Tigger3b DNA MER2_type 345 636 -595 485 138 0 0 chr5 104656425 104656512 -94973638 - L1PA15 LINE L1 0 6165 6079 3086 131 36 51 chr5 104656512 104656540 -94973610 + Tigger3b DNA MER2_type 644 671 -2358 1686 140 87 36 chr5 104656540 104656897 -94973253 + THE1C LTR MaLR 1 375 0 3086 131 36 51 chr5 104656897 104657461 -94972689 + Tigger3b DNA MER2_type 671 1229 -3 1727 186 24 0 chr5 104657954 104658250 -94971900 + AluJb SINE Alu 1 303 -9 5716 173 31 1 chr5 104658383 104659623 -94970527 - L1MA4 LINE L1 -6 6294 5021 439 83 14 14 chr5 104659615 104659687 -94970463 + L1 LINE L1 4290 4361 -1785 * 207 0 0 0 chr5 104659687 104659710 -94970440 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1302 191 8 25 chr5 104659712 104659953 -94970197 + AluJo SINE Alu 1 237 -75 778 357 22 13 chr5 104661327 104661638 -94968512 + MER115 DNA AcHobo 1 314 -379 391 276 115 84 chr5 104661664 104661925 -94968225 + MER115 DNA AcHobo 387 655 -38 325 236 81 49 chr5 104662023 104662146 -94968004 + L1ME LINE L1 3516 3642 -2504 27 81 0 0 chr5 104662146 104662208 -94967942 + AT_rich Low_complexity Low_complexity 1 62 0 1168 257 84 26 chr5 104662789 104663018 -94967132 + L1ME LINE L1 4665 4879 -1285 2301 94 3 3 chr5 104663018 104663327 -94966823 - AluSq SINE Alu -4 309 1 1168 257 84 26 chr5 104663327 104664001 -94966149 + L1ME LINE L1 4879 5638 -526 325 167 51 26 chr5 104664085 104664163 -94965987 + L1ME LINE L1 5672 5751 -411 316 73 127 0 chr5 104664700 104664755 -94965395 - L1P LINE L1 -2409 3737 3676 2492 51 0 0 chr5 104664755 104665068 -94965082 + L1PA7 LINE L1 5840 6153 -1 2068 100 21 0 chr5 104665084 104665480 -94964670 + AluSq SINE Alu 1 402 0 249 173 47 11 chr5 104666648 104666754 -94963396 + L1MA1 LINE L1 6198 6302 0 389 308 57 19 chr5 104667115 104667274 -94962876 - MIR SINE MIR -50 212 48 1217 237 112 53 chr5 104667289 104667762 -94962388 - MLT1D LTR MaLR 0 505 5 236 216 90 54 chr5 104668659 104668770 -94961380 + MIR3 SINE MIR 42 156 -52 766 224 18 35 chr5 104668772 104668942 -94961208 - MER5A DNA MER1_type -1 188 22 1696 192 30 0 chr5 104671685 104672018 -94958132 - MER2 DNA MER2_type -1 343 1 1556 180 3 29 chr5 104672521 104672827 -94957323 - AluJb SINE Alu -11 301 4 662 110 0 10 chr5 104673708 104673808 -94956342 + HY3 scRNA scRNA 1 99 -2 221 333 167 0 chr5 104674578 104674728 -94955422 + MIR SINE MIR 86 260 -2 195 429 0 0 chr5 104675180 104675271 -94954879 - MIR SINE MIR -78 130 40 4807 189 35 34 chr5 104675285 104676341 -94953809 - Tigger6a DNA MER2_type -3 1080 24 830 354 60 12 chr5 104676530 104677198 -94952952 - L2 LINE L2 -92 3221 2527 180 77 0 0 chr5 104677598 104677624 -94952526 + (CGGGGG)n Simple_repeat Simple_repeat 5 30 0 21 0 0 0 chr5 104679579 104679600 -94950550 + AT_rich Low_complexity Low_complexity 1 21 0 7039 210 128 9 chr5 104681391 104682960 -94947190 + MER52A LTR ERV1 1 1755 0 592 319 121 49 chr5 104683094 104683442 -94946708 - LTR16B LTR ERVL -91 373 1 235 242 94 31 chr5 104684130 104684258 -94945892 + L1MDa LINE L1 1647 1782 -4758 638 247 6 41 chr5 104684743 104684913 -94945237 - MER20 DNA MER1_type -1 218 55 301 259 88 48 chr5 104684927 104685074 -94945076 + L1MDa LINE L1 2434 2586 -3954 34 24 0 0 chr5 104685531 104685572 -94944578 + AT_rich Low_complexity Low_complexity 1 41 0 580 324 45 25 chr5 104686051 104686295 -94943855 + L2 LINE L2 17 265 -3049 5488 197 156 33 chr5 104686361 104687859 -94942291 - MER52A LTR ERV1 0 1755 1 183 313 0 75 chr5 104687985 104688052 -94942098 + L2 LINE L2 405 466 -2848 1416 274 58 23 chr5 104688104 104688622 -94941528 + MLT1F LTR MaLR 7 542 0 767 304 37 71 chr5 104688623 104688742 -94941408 + L2 LINE L2 507 629 -2685 1121 258 56 3 chr5 104688742 104689029 -94941121 - AluJo SINE Alu 0 302 1 767 304 37 71 chr5 104689029 104689317 -94940833 + L2 LINE L2 629 900 -2414 279 0 0 0 chr5 104689414 104689445 -94940705 + (A)n Simple_repeat Simple_repeat 1 31 0 951 340 113 14 chr5 104689445 104689965 -94940185 + L2 LINE L2 2033 2604 -710 253 333 22 66 chr5 104690043 104690226 -94939924 + L2 LINE L2 2976 3150 -163 21153 83 2 6 chr5 104690294 104694043 -94936107 - L1PA7 LINE L1 -3 6151 2416 224 336 104 0 chr5 104694052 104694177 -94935973 + L2 LINE L2 3159 3296 -17 435 281 66 53 chr5 104694272 104694574 -94935576 + L1MDa LINE L1 3478 3783 -2757 26 0 0 0 chr5 104694581 104694607 -94935543 + AT_rich Low_complexity Low_complexity 1 26 0 1135 275 62 0 chr5 104697129 104697529 -94932621 - L1MC/D LINE L1 -2031 5777 5353 1890 185 5 40 chr5 104698488 104698916 -94931234 - MLT2D LTR ERVL 0 414 2 440 317 68 6 chr5 104698989 104699150 -94931000 + L1MCc LINE L1 1065 1235 -5188 534 300 30 19 chr5 104699172 104699435 -94930715 + L1MCc LINE L1 1147 1412 -5011 357 296 76 60 chr5 104699528 104699910 -94930240 - L1MCc LINE L1 -6019 404 17 476 191 0 0 chr5 104699974 104700058 -94930092 + FLAM_A SINE Alu 42 125 -17 316 298 62 19 chr5 104700079 104700443 -94929707 - L1MEd LINE L1 -4811 1776 1360 346 252 70 0 chr5 104700566 104700681 -94929469 - L1MEd LINE L1 -5172 1237 1115 1176 263 127 35 chr5 104702107 104702563 -94927587 + MLT1D LTR MaLR 1 498 -7 1722 174 23 20 chr5 104702590 104702970 -94927180 - LOR1b LTR ERV1 0 461 1 3407 120 39 2 chr5 104705289 104705797 -94924353 + MER1A DNA MER1_type 1 527 0 241 77 0 0 chr5 104707427 104707466 -94922684 + Alu SINE Alu 260 298 -2 249 256 0 26 chr5 104709014 104709092 -94921058 + L1MCc LINE L1 1736 1811 -5120 2406 65 0 3 chr5 104709273 104709583 -94920567 + AluY SINE Alu 1 309 -2 300 273 8 31 chr5 104709692 104709820 -94920330 + L1M1 LINE L1 2816 3016 -4625 1065 294 22 56 chr5 104709860 104710305 -94919845 - MLT1F LTR MaLR -110 432 3 693 242 159 44 chr5 104710350 104710739 -94919411 + L1MC4a LINE L1 5400 5833 -1975 22 99 0 0 chr5 104711427 104711498 -94918652 + AT_rich Low_complexity Low_complexity 1 71 0 232 312 74 42 chr5 104711840 104712029 -94918121 - L1M4 LINE L1 -1947 4199 4005 2265 82 0 13 chr5 104712191 104712495 -94917655 - AluY SINE Alu -11 300 1 811 149 56 5 chr5 104712508 104712691 -94917459 + MER61C LTR ERV1 1 175 -259 808 141 81 20 chr5 104712690 104712839 -94917311 + MER61D LTR ERV1 343 500 -1 * 1044 152 48 0 chr5 104713035 104713200 -94916950 + AluSx SINE Alu 1 173 -139 25 0 0 0 chr5 104713229 104713254 -94916896 + AT_rich Low_complexity Low_complexity 1 25 0 28 0 0 0 chr5 104713523 104713551 -94916599 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr5 104713591 104713628 -94916522 + AT_rich Low_complexity Low_complexity 1 37 0 1958 118 0 43 chr5 104714224 104714528 -94915622 + AluY SINE Alu 1 291 -20 574 305 76 77 chr5 104714551 104715107 -94915043 - L2 LINE L2 -198 3115 2556 1068 217 114 4 chr5 104715145 104715417 -94914733 + AluSx SINE Alu 1 302 0 28 29 0 0 chr5 104715870 104715905 -94914245 + AT_rich Low_complexity Low_complexity 1 35 0 301 181 38 9 chr5 104716229 104716334 -94913816 + (TA)n Simple_repeat Simple_repeat 1 108 0 261 291 68 10 chr5 104716923 104717026 -94913124 - MIR SINE MIR -39 223 115 754 258 39 0 chr5 104717672 104717850 -94912300 - MER5A DNA MER1_type -2 187 3 276 59 0 0 chr5 104717869 104717903 -94912247 - L1P3 LINE L1 -687 5485 5452 11417 163 38 62 chr5 104717907 104720916 -94909234 + L1MA3 LINE L1 1489 4568 -3156 216 0 0 0 chr5 104720916 104720940 -94909210 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 11417 163 38 62 chr5 104720940 104724126 -94906024 + L1MA3 LINE L1 4568 7828 104 2036 102 0 14 chr5 104724126 104724409 -94905741 + AluSx SINE Alu 3 281 -31 180 0 0 0 chr5 104724413 104724433 -94905717 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 11417 163 38 62 chr5 104724433 104724622 -94905528 + L1MA3 LINE L1 7525 7717 -7 1492 224 43 20 chr5 104724618 104725010 -94905140 + L1MB7 LINE L1 5773 6173 -11 * 602 321 93 19 chr5 104725234 104725900 -94904250 + L1M4 LINE L1 4056 4770 -1376 308 248 30 15 chr5 104726725 104726858 -94903292 + (CAGAGA)n Simple_repeat Simple_repeat 2 136 0 1100 158 0 0 chr5 104726896 104727073 -94903077 - MER7A DNA MER2_type -171 175 1 24 85 0 0 chr5 104727418 104727477 -94902673 + AT_rich Low_complexity Low_complexity 1 59 0 220 196 0 0 chr5 104727692 104727738 -94902412 + (CAAT)n Simple_repeat Simple_repeat 2 47 0 213 412 24 19 chr5 104728062 104728273 -94901877 + MIR SINE MIR 46 257 -5 186 360 23 12 chr5 104729227 104729313 -94900837 - L2 LINE L2 -50 3222 3136 210 139 0 0 chr5 104729482 104729518 -94900632 + (TG)n Simple_repeat Simple_repeat 1 36 0 275 49 24 0 chr5 104729723 104729764 -94900386 + (CA)n Simple_repeat Simple_repeat 2 43 0 183 42 0 0 chr5 104730287 104730311 -94899839 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 195 42 0 0 chr5 104730310 104730334 -94899816 + (CA)n Simple_repeat Simple_repeat 1 24 0 371 255 0 21 chr5 104731299 104731393 -94898757 - L2 LINE L2 -1 3312 3221 266 358 0 74 chr5 104731430 104731606 -94898544 - L2 LINE L2 -308 3005 2843 24 0 0 0 chr5 104732350 104732374 -94897776 + AT_rich Low_complexity Low_complexity 1 24 0 216 328 44 55 chr5 104733357 104733540 -94896610 - MIR SINE MIR -66 196 16 198 284 85 50 chr5 104734122 104734263 -94895887 + L2 LINE L2 3124 3269 -44 233 318 0 16 chr5 104735316 104735379 -94894771 - MIR3 SINE MIR -141 67 6 1750 316 127 7 chr5 104744852 104745627 -94884523 + L2 LINE L2 1762 2629 -685 264 197 28 0 chr5 104745635 104745706 -94884444 + (TA)n Simple_repeat Simple_repeat 2 74 0 202 358 45 0 chr5 104745783 104745850 -94884300 + L2 LINE L2 3221 3290 -23 25 0 0 0 chr5 104746169 104746194 -94883956 + AT_rich Low_complexity Low_complexity 1 25 0 299 387 158 11 chr5 104746484 104746934 -94883216 - L2 LINE L2 -348 2966 2451 1508 189 63 58 chr5 104747180 104747695 -94882455 + MER67C LTR ERV1 1 486 -28 252 321 61 8 chr5 104747718 104747849 -94882301 + MER69 DNA AcHobo 218 355 -2171 735 148 11 197 chr5 104748000 104748264 -94881886 + AluJo SINE Alu 1 215 -97 3127 227 5 6 chr5 104848318 104849115 -94781035 + L1 LINE L1 3913 4708 -1438 * 3550 131 5 8 chr5 104849112 104849822 -94780328 + L1P5 LINE L1 5084 5791 -360 321 267 0 22 chr5 104849822 104849912 -94780238 + L1MC4 LINE L1 6615 6702 -1340 2603 82 8 24 chr5 104849912 104849923 -94780227 + L1PB1 LINE L1 5782 5792 -359 255 31 0 0 chr5 104849923 104849955 -94780195 + (CA)n Simple_repeat Simple_repeat 2 33 0 2603 82 8 24 chr5 104849955 104850319 -94779831 + L1PB1 LINE L1 5792 6151 0 1600 234 0 0 chr5 104850334 104850676 -94779474 + L1 LINE L1 2377 2718 -3428 21 0 0 0 chr5 104850756 104850777 -94779373 + AT_rich Low_complexity Low_complexity 1 21 0 440 96 110 0 chr5 104850862 104850935 -94779215 - L1MA6 LINE L1 -182 6118 6038 972 123 41 6 chr5 104850938 104851109 -94779041 + L1MA6 LINE L1 6118 6294 -6 180 77 0 0 chr5 104851636 104851662 -94778488 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 1866 172 16 29 chr5 104851834 104852218 -94777932 + L1PB4 LINE L1 5777 6155 -1 4430 102 15 1 chr5 104852618 104853266 -94776884 - L1PA11 LINE L1 -1 6173 5517 346 91 73 0 chr5 104853294 104853349 -94776801 - L1PA11 LINE L1 -1972 4174 4116 * 23286 51 11 2 chr5 104853344 104856451 -94773699 - L1P4 LINE L1 -659 5515 2384 1642 234 67 13 chr5 104856631 104857157 -94772993 - L1 LINE L1 -2964 3884 3331 4178 254 51 45 chr5 104857170 104859369 -94770781 - L1 LINE L1 -3681 3167 1182 1163 340 53 37 chr5 104859626 104860270 -94769880 - L1 LINE L1 -6133 716 63 266 267 13 0 chr5 104860344 104860419 -94769731 + (TA)n Simple_repeat Simple_repeat 2 77 0 300 111 0 0 chr5 104860423 104860468 -94769682 + (TG)n Simple_repeat Simple_repeat 2 46 0 1494 176 48 0 chr5 104860471 104860598 -94769552 - AluJo SINE Alu -45 267 148 270 0 0 0 chr5 104860598 104860628 -94769522 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1494 176 48 0 chr5 104860628 104860750 -94769400 - AluJo SINE Alu -164 148 6 241 227 0 40 chr5 104862273 104862348 -94767802 + T-rich Low_complexity Low_complexity 5 76 0 324 0 0 0 chr5 104862782 104862818 -94767332 + (TG)n Simple_repeat Simple_repeat 2 37 0 6666 122 154 86 chr5 104863136 104864725 -94765425 - pTR5 LTR ERV1 0 2438 741 249 286 0 0 chr5 104864880 104864950 -94765200 + MLT1K LTR MaLR 485 554 -34 388 212 8 17 chr5 104866085 104866203 -94763947 + CT-rich Low_complexity Low_complexity 4 120 0 183 284 15 60 chr5 104866326 104866393 -94763757 - MIR SINE MIR -71 137 74 557 241 14 21 chr5 104868269 104868414 -94761736 + MER69 DNA AcHobo 4 147 -2379 824 246 0 17 chr5 104869252 104869431 -94760719 + MLT1H LTR MaLR 12 187 -362 285 231 46 0 chr5 104869573 104869638 -94760512 + MLT1H LTR MaLR 482 549 0 194 274 0 83 chr5 104870199 104870283 -94759867 - MIR SINE MIR -67 195 119 258 330 55 18 chr5 104870540 104870813 -94759337 + L1M4 LINE L1 3812 4094 -2052 388 211 26 0 chr5 104870850 104870926 -94759224 + MER96 DNA MER1_type? 87 164 -11 494 275 79 44 chr5 104872504 104872631 -94757519 + MIR SINE MIR 23 163 -99 1942 149 14 3 chr5 104872631 104872926 -94757224 - AluSx SINE Alu -14 298 1 494 275 79 44 chr5 104872926 104873027 -94757123 + MIR SINE MIR 163 259 -3 24 0 0 0 chr5 104874093 104874117 -94756033 + AT_rich Low_complexity Low_complexity 1 24 0 305 180 0 0 chr5 104874793 104874843 -94755307 - L1MC4 LINE L1 -1339 6703 6654 22 0 0 0 chr5 104875134 104875156 -94754994 + AT_rich Low_complexity Low_complexity 1 22 0 34898 80 7 28 chr5 104875196 104881091 -94749059 + L1PA6 LINE L1 385 6148 -6 23 33 0 0 chr5 104881100 104881130 -94749020 + AT_rich Low_complexity Low_complexity 1 30 0 238 289 79 0 chr5 104882585 104882661 -94747489 + L2 LINE L2 3232 3313 0 348 320 10 0 chr5 104882821 104882921 -94747229 + MIR SINE MIR 45 145 -63 22 0 0 0 chr5 104882960 104882982 -94747168 + AT_rich Low_complexity Low_complexity 1 22 0 267 380 47 56 chr5 104883234 104883468 -94746682 - L2 LINE L2 -841 2473 2242 33 0 0 0 chr5 104884388 104884421 -94745729 + AT_rich Low_complexity Low_complexity 1 33 0 1726 198 5 49 chr5 104884463 104884517 -94745633 - MLT1A1 LTR MaLR -12 353 298 2056 118 7 0 chr5 104884517 104884830 -94745320 - AluSg SINE Alu 0 315 1 1726 198 5 49 chr5 104884830 104885143 -94745007 - MLT1A1 LTR MaLR -67 298 1 319 124 73 19 chr5 104885396 104885466 -94744684 - MLT1A2 LTR MaLR 0 374 297 7821 71 5 4 chr5 104885980 104886986 -94743164 - LTR13 LTR ERVK 0 1007 1 2301 70 39 0 chr5 104887657 104887943 -94742207 + AluY SINE Alu 1 297 -14 236 287 89 20 chr5 104889730 104889831 -94740319 - MIR SINE MIR -51 211 104 280 353 29 17 chr5 104890433 104890606 -94739544 - L2 LINE L2 -944 2370 2196 38 0 0 0 chr5 104890716 104890754 -94739396 + AT_rich Low_complexity Low_complexity 1 38 0 7684 24 0 0 chr5 104890754 104891984 -94738166 - L1PA3 LINE L1 -3 6152 4927 344 299 40 62 chr5 104892180 104892238 -94737912 + MER5B DNA MER1_type 6 64 -114 180 0 0 0 chr5 104892238 104892258 -94737892 + (CAAAT)n Simple_repeat Simple_repeat 1 20 0 344 299 40 62 chr5 104892258 104892376 -94737774 + MER5B DNA MER1_type 64 178 0 202 350 181 17 chr5 104892478 104892943 -94737207 + L2 LINE L2 2340 2880 -434 580 254 89 64 chr5 104894737 104895017 -94735133 + L2 LINE L2 3026 3312 -1 1413 245 80 36 chr5 104895359 104895891 -94734259 + L1ME LINE L1 5213 5756 -410 504 304 70 9 chr5 104896293 104896507 -94733643 - L2 LINE L2 0 3313 3087 251 316 42 11 chr5 104896911 104897006 -94733144 - L3 LINE CR1 -1399 178 81 328 310 68 36 chr5 104897038 104897207 -94732943 + MIR SINE MIR 20 190 -60 271 321 18 54 chr5 104897222 104897334 -94732816 - MER5B DNA MER1_type -70 108 1 851 267 167 12 chr5 104898566 104898974 -94731176 - L1ME3A LINE L1 -4 6166 5696 2432 60 3 28 chr5 104898976 104899295 -94730855 - AluY SINE Alu 0 311 1 4357 226 47 32 chr5 104899328 104901416 -94728734 - L1MB7 LINE L1 -286 5898 3777 4438 227 27 17 chr5 104901429 104903251 -94726899 - L1MC2 LINE L1 -25 6319 4480 2321 77 7 3 chr5 104903251 104903549 -94726601 - AluY SINE Alu -12 299 1 4438 227 27 17 chr5 104903549 104903737 -94726413 - L1MC2 LINE L1 -1864 4480 4295 1589 142 23 3 chr5 104903992 104904299 -94725851 + L1PA16 LINE L1 5814 6156 -10 27 29 0 0 chr5 104904409 104904443 -94725707 + AT_rich Low_complexity Low_complexity 1 34 0 23 54 0 0 chr5 104904481 104904518 -94725632 + AT_rich Low_complexity Low_complexity 1 37 0 990 132 38 6 chr5 104904682 104904841 -94725309 - MSTB LTR MaLR -102 324 161 447 259 93 56 chr5 104905304 104905466 -94724684 - MIR SINE MIR -49 213 46 2154 120 0 9 chr5 104905777 104906093 -94724057 - AluSp SINE Alu 0 313 1 605 209 41 77 chr5 104906700 104906896 -94723254 + MER63A DNA MER1_type 1 189 -21 963 232 81 18 chr5 104906941 104907226 -94722924 - MER58B DNA MER1_type -1 340 38 367 264 61 41 chr5 104907490 104907687 -94722463 + MER112 DNA MER1_type 1 201 -59 332 298 34 34 chr5 104908515 104908693 -94721457 + MIR SINE MIR 29 206 -56 598 346 55 24 chr5 104909836 104910377 -94719773 - L1ME3 LINE L1 -309 5853 5296 236 312 78 23 chr5 104910408 104910882 -94719268 - L1ME3 LINE L1 -905 5241 4742 730 354 83 28 chr5 104910930 104911433 -94718717 - L3 LINE CR1 -41 1536 1006 320 419 52 16 chr5 104912495 104912686 -94717464 - L2 LINE L2 0 3272 3075 2095 85 0 39 chr5 104913910 104914215 -94715935 - AluSg SINE Alu -17 293 1 215 179 45 15 chr5 104915613 104915627 -94714523 + A-rich Low_complexity Low_complexity 2 14 -56 771 153 0 30 chr5 104915627 104915758 -94714392 + FLAM_C SINE Alu 1 127 -6 215 179 45 15 chr5 104915758 104915810 -94714340 + A-rich Low_complexity Low_complexity 14 70 0 23 0 0 0 chr5 104915868 104915891 -94714259 + AT_rich Low_complexity Low_complexity 1 23 0 2030 107 21 0 chr5 104916568 104916693 -94713457 + AluY SINE Alu 1 122 -189 279 0 0 0 chr5 104916693 104916724 -94713426 + (CA)n Simple_repeat Simple_repeat 2 32 0 2030 107 21 0 chr5 104916724 104916888 -94713262 + AluY SINE Alu 122 296 -15 610 289 76 5 chr5 104918140 104918351 -94711799 - MIR SINE MIR -8 254 29 205 239 0 0 chr5 104918630 104918676 -94711474 - L2 LINE L2 -10 3303 3258 448 344 78 9 chr5 104920288 104920506 -94709644 + MIR SINE MIR 22 254 -8 2438 147 23 0 chr5 104920519 104920907 -94709243 - MSTB1 LTR MaLR -35 397 1 2307 46 0 0 chr5 104922008 104922319 -94707831 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 104923402 104923423 -94706727 + AT_rich Low_complexity Low_complexity 1 21 0 318 257 40 20 chr5 104923794 104923895 -94706255 + L2 LINE L2 3168 3270 -2 213 341 92 60 chr5 104924044 104924361 -94705789 + L2 LINE L2 155 481 -2833 440 348 101 35 chr5 104924561 104924986 -94705164 + L2 LINE L2 517 969 -2345 184 326 20 0 chr5 104925005 104925054 -94705096 + MIR SINE MIR 21 70 -192 543 340 123 47 chr5 104926002 104927021 -94703129 + L2 LINE L2 1583 2678 -636 22 35 0 0 chr5 104927849 104927878 -94702272 + AT_rich Low_complexity Low_complexity 1 29 0 312 120 0 0 chr5 104928523 104928573 -94701577 - L1MA4 LINE L1 -5 6295 6246 22 35 0 0 chr5 104928731 104928760 -94701390 + AT_rich Low_complexity Low_complexity 1 29 0 1739 167 28 0 chr5 104928761 104929048 -94701102 + L1M4c LINE L1 20 314 -6070 3053 200 60 12 chr5 104929056 104929876 -94700274 + L1M4c LINE L1 641 1499 -4885 490 138 11 0 chr5 104929876 104929963 -94700187 + L1M1 LINE L1 5706 5793 -510 2566 173 45 37 chr5 104930023 104930624 -94699526 + L1M4c LINE L1 1762 2367 -4017 1981 143 21 16 chr5 104930624 104931002 -94699148 + L1MB3 LINE L1 5800 6179 -4 2640 157 30 10 chr5 104931002 104931493 -94698657 + L1MA3 LINE L1 5627 6127 -178 348 24 0 0 chr5 104931493 104931534 -94698616 + (TTA)n Simple_repeat Simple_repeat 2 42 0 807 105 0 0 chr5 104931537 104931651 -94698499 - AluSg/x SINE Alu -30 280 167 1680 162 0 44 chr5 104931911 104932226 -94697924 + AluSx SINE Alu 1 301 -11 1201 71 0 0 chr5 104932539 104932693 -94697457 - L1PA7 LINE L1 0 6154 6001 2675 194 37 50 chr5 104932868 104934330 -94695820 - L1PB1 LINE L1 -1 6150 4774 1031 234 44 35 chr5 104934326 104934720 -94695430 + L1M2 LINE L1 1542 2029 -4819 * 2062 122 0 0 chr5 104934746 104935033 -94695117 + AluSx SINE Alu 4 290 -22 804 203 0 16 chr5 104935051 104935233 -94694917 - L1MA4 LINE L1 -19 6281 6103 496 308 85 15 chr5 104935350 104935610 -94694540 - L1MEc LINE L1 -4638 2484 2207 280 279 29 19 chr5 104935610 104935714 -94694436 - L1MEc LINE L1 -5135 1288 1184 732 164 0 30 chr5 104937345 104937479 -94692671 + FLAM_C SINE Alu 1 130 -13 23 0 0 0 chr5 104937713 104937736 -94692414 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 104937957 104938001 -94692149 + AT_rich Low_complexity Low_complexity 1 44 0 495 256 60 15 chr5 104938122 104938255 -94691895 + MER5A DNA MER1_type 1 139 -50 681 247 42 12 chr5 104938376 104938542 -94691608 + MER5B DNA MER1_type 8 178 0 2552 52 0 0 chr5 104938975 104939280 -94690870 + AluY SINE Alu 1 305 -6 450 306 49 71 chr5 104939523 104940030 -94690120 + L1MEc LINE L1 2158 2614 -3601 213 115 39 19 chr5 104940898 104940950 -94689200 + (TATAA)n Simple_repeat Simple_repeat 4 56 0 1084 129 12 6 chr5 104941027 104941198 -94688952 + L1M1 LINE L1 5438 5609 -693 208 200 22 0 chr5 104941690 104941735 -94688415 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 303 338 0 7 chr5 104941998 104942134 -94688016 - HAL1 LINE L1 -994 1513 1379 1099 168 11 0 chr5 104943825 104944010 -94686140 + L1MC1 LINE L1 5426 5612 -721 930 45 0 0 chr5 104944022 104944134 -94686016 - L1PA3 LINE L1 -3 6152 6041 3739 135 48 57 chr5 104944134 104944877 -94685273 + L1MC1 LINE L1 5595 6331 -2 24 32 0 0 chr5 104945667 104945698 -94684452 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 104946365 104946386 -94683764 + AT_rich Low_complexity Low_complexity 1 21 0 960 284 122 33 chr5 104947160 104947579 -94682571 + MLT1F LTR MaLR 85 540 -2 6022 200 33 31 chr5 104947671 104948446 -94681704 + L1MA9 LINE L1 3789 4561 -1751 1963 152 48 22 chr5 104948446 104948801 -94681349 - THE1B LTR MaLR 0 364 1 11126 110 6 2 chr5 104948801 104950375 -94679775 - THE1B-int LTR MaLR 0 1580 1 2016 129 47 44 chr5 104950375 104950738 -94679412 - THE1B LTR MaLR 0 364 1 6022 200 33 31 chr5 104950738 104952084 -94678066 + L1MA9 LINE L1 4560 5932 -380 273 232 188 18 chr5 104952203 104952315 -94677835 + MIR SINE MIR 96 226 -36 24 0 0 0 chr5 104952554 104952578 -94677572 + AT_rich Low_complexity Low_complexity 1 24 0 185 320 0 27 chr5 104952831 104952906 -94677244 - L2 LINE L2 -259 3054 2982 28 29 0 0 chr5 104953280 104953315 -94676835 + AT_rich Low_complexity Low_complexity 1 35 0 303 234 78 0 chr5 104953770 104953847 -94676303 - L1MC4 LINE L1 -1347 6695 6613 755 181 0 5 chr5 104953854 104954293 -94675857 + (TA)n Simple_repeat Simple_repeat 1 436 0 35 24 0 0 chr5 104954294 104954336 -94675814 + AT_rich Low_complexity Low_complexity 1 42 0 720 156 0 0 chr5 104954336 104954516 -94675634 + (TA)n Simple_repeat Simple_repeat 1 180 0 2131 98 3 7 chr5 104955276 104955562 -94674588 - AluSx SINE Alu -13 299 15 24 32 0 0 chr5 104955947 104955978 -94674172 + AT_rich Low_complexity Low_complexity 1 31 0 330 263 0 40 chr5 104957834 104957933 -94672217 - MLT2E LTR ERVL -2 626 532 259 112 90 0 chr5 104958405 104958456 -94671694 - MLT2A1 LTR ERVL 0 520 389 538 65 59 30 chr5 104958470 104958639 -94671511 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 2755 74 22 30 chr5 104958873 104959279 -94670871 - MLT2A1 LTR ERVL -41 403 1 2280 103 0 10 chr5 104960025 104960326 -94669824 + AluSx SINE Alu 2 299 -13 781 218 143 70 chr5 104960326 104960595 -94669555 - MER65B LTR ERV1 -19 512 264 2171 81 0 0 chr5 104960595 104960916 -94669234 + AluY SINE Alu 15 335 0 781 218 143 70 chr5 104960916 104961056 -94669094 - MER65B LTR ERV1 -267 264 1 383 310 99 54 chr5 104961056 104961672 -94668478 - MER65B-int LTR ERV1 -8 4863 4220 253 308 19 9 chr5 104962021 104962128 -94668022 - MER51-int LTR ERV1 -1287 6529 6422 21 57 0 0 chr5 104963939 104963974 -94666176 + AT_rich Low_complexity Low_complexity 1 35 0 7599 90 6 7 chr5 104964135 104965220 -94664930 + L1P LINE L1 3991 5073 -1073 1925 210 48 26 chr5 104965218 104965563 -94664587 - L1ME1 LINE L1 -334 5832 5496 * 203 79 26 0 chr5 104965563 104965601 -94664549 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2204 82 7 0 chr5 104965602 104965881 -94664269 - AluSp SINE Alu -32 281 1 1925 210 48 26 chr5 104965881 104966028 -94664122 - L1ME1 LINE L1 -669 5497 5327 413 366 68 10 chr5 104966824 104967223 -94662927 + L1MEc LINE L1 385 806 -5915 6663 65 12 0 chr5 104967570 104968743 -94661407 + L1PA7 LINE L1 4967 6151 -3 465 295 45 33 chr5 104968808 104969237 -94660913 + L1MEc LINE L1 1272 1700 -4840 253 243 14 0 chr5 104969237 104969311 -94660839 + (TAA)n Simple_repeat Simple_repeat 3 77 0 1177 201 0 64 chr5 104969667 104969950 -94660200 + MLT1B LTR MaLR 3 267 -123 1087 276 123 20 chr5 104969970 104970467 -94659683 - L1ME1 LINE L1 -205 5961 5414 798 273 55 3 chr5 104970452 104970741 -94659409 - L1ME1 LINE L1 -1009 5137 4834 * 25 0 0 0 chr5 104972897 104972922 -94657228 + AT_rich Low_complexity Low_complexity 1 25 0 631 262 98 52 chr5 104973017 104973453 -94656697 + MLT1H LTR MaLR 56 544 -5 255 61 0 0 chr5 104973453 104973486 -94656664 + (CA)n Simple_repeat Simple_repeat 2 34 0 211 274 0 32 chr5 104973764 104973826 -94656324 + MIR SINE MIR 81 140 -122 224 128 0 64 chr5 104973860 104973907 -94656243 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 24 67 0 0 chr5 104974049 104974094 -94656056 + AT_rich Low_complexity Low_complexity 1 45 0 9996 29 1 0 chr5 104974941 104976930 -94653220 - L1PA3 LINE L1 -3 6152 4193 23 33 0 0 chr5 104976947 104976977 -94653173 + AT_rich Low_complexity Low_complexity 1 30 0 2468 316 50 44 chr5 104977101 104978689 -94651461 + L1PBa LINE L1 2 1599 -5264 * 5080 192 65 21 chr5 104978688 104981002 -94649148 + L1PBb LINE L1 16 2450 -3753 324 172 0 16 chr5 104981000 104981064 -94649086 + L1PB1 LINE L1 11 73 -6790 * 10878 205 25 21 chr5 104981056 104983909 -94646241 + L1PB1 LINE L1 928 4011 -2851 2137 129 0 0 chr5 104983909 104984221 -94645929 + AluSx SINE Alu 1 312 0 10878 205 25 21 chr5 104984221 104985637 -94644513 + L1PB1 LINE L1 4011 5419 -1443 5936 96 16 16 chr5 104985639 104986341 -94643809 + L1PB1 LINE L1 5800 6501 -366 1014 146 0 0 chr5 104986341 104986512 -94643638 + (TA)n Simple_repeat Simple_repeat 2 172 0 255 31 0 0 chr5 104986511 104986543 -94643607 + (CA)n Simple_repeat Simple_repeat 2 33 0 * 5936 96 16 16 chr5 104986512 104986908 -94643242 + L1PB1 LINE L1 6500 6867 0 1577 234 0 0 chr5 104986923 104987265 -94642885 + L1 LINE L1 2377 2718 -3428 21 0 0 0 chr5 104987345 104987366 -94642784 + AT_rich Low_complexity Low_complexity 1 21 0 436 96 110 0 chr5 104987451 104987524 -94642626 - L1MA6 LINE L1 -182 6118 6038 963 123 41 6 chr5 104987527 104987698 -94642452 + L1MA6 LINE L1 6118 6294 -6 180 77 0 0 chr5 104988225 104988251 -94641899 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 1868 172 16 29 chr5 104988423 104988807 -94641343 + L1PB4 LINE L1 5777 6155 -1 4524 99 14 1 chr5 104989207 104989856 -94640294 - L1PA11 LINE L1 -1 6173 5517 346 91 73 0 chr5 104989884 104989939 -94640211 - L1PA11 LINE L1 -1972 4174 4116 * 9007 187 73 6 chr5 104989934 104992722 -94637428 - L1P4 LINE L1 -659 5515 2373 276 330 23 0 chr5 104992734 104992822 -94637328 - L2 LINE L2 -46 3267 3178 317 330 29 0 chr5 104993277 104993380 -94636770 + L2 LINE L2 2366 2471 -843 489 293 31 52 chr5 104993493 104993684 -94636466 + MER5A DNA MER1_type 2 188 -1 1136 183 50 109 chr5 104994882 104995309 -94634841 - MER67C LTR ERV1 -28 486 112 2578 47 19 0 chr5 104995309 104995631 -94634519 - L1PA5 LINE L1 -5 6149 5822 1136 183 50 109 chr5 104995631 104995732 -94634418 - MER67C LTR ERV1 -402 112 7 189 339 70 17 chr5 104997048 104997163 -94632987 + L2 LINE L2 3193 3313 0 21 0 0 0 chr5 104997186 104997207 -94632943 + AT_rich Low_complexity Low_complexity 1 21 0 268 221 158 0 chr5 104997442 104997569 -94632581 + MER113 DNA MER1_type? 37 183 -338 325 248 0 79 chr5 104997592 104997693 -94632457 + Charlie1 DNA MER1_type 1 93 -2668 1776 184 52 79 chr5 104997709 104998252 -94631898 + Charlie1 DNA MER1_type 2207 2734 -27 477 184 70 9 chr5 104998357 104998471 -94631679 + MER113 DNA MER1_type? 331 451 -70 210 118 0 0 chr5 104999208 104999242 -94630908 + (TA)n Simple_repeat Simple_repeat 2 35 0 345 323 24 48 chr5 104999274 104999398 -94630752 + L2 LINE L2 3191 3311 -2 368 280 126 28 chr5 104999887 105000030 -94630120 - L2 LINE L2 -1 3312 3156 354 290 123 19 chr5 105000219 105000381 -94629769 - MIR SINE MIR -2 260 82 366 281 70 0 chr5 105001000 105001114 -94629036 - L2 LINE L2 -2 3311 3190 202 313 71 30 chr5 105002702 105002801 -94627349 + L2 LINE L2 3168 3270 -2 371 359 107 13 chr5 105003045 105003354 -94626796 + L2 LINE L2 2412 2749 -565 309 149 0 0 chr5 105003354 105003401 -94626749 - MER3 DNA MER1_type 0 209 163 804 146 0 0 chr5 105003413 105003523 -94626627 + FLAM_C SINE Alu 3 112 -31 231 232 0 45 chr5 105003528 105003640 -94626510 + (TATATG)n Simple_repeat Simple_repeat 2 108 0 715 259 0 24 chr5 105003647 105003817 -94626333 + FRAM SINE Alu 2 167 -9 1556 148 0 0 chr5 105003885 105004114 -94626036 - AluJb SINE Alu -80 232 4 614 193 9 0 chr5 105004117 105004226 -94625924 - MER3 DNA MER1_type -97 112 3 822 161 0 7 chr5 105004292 105004435 -94625715 - AluSg/x SINE Alu -15 297 156 938 219 51 33 chr5 105004779 105004994 -94625156 + AluJo SINE Alu 1 219 -93 381 121 36 0 chr5 105005108 105005191 -94624959 + GA-rich Low_complexity Low_complexity 1 86 0 266 299 88 78 chr5 105006737 105007135 -94623015 - MLT1I LTR MaLR -4 405 4 664 255 97 97 chr5 105008641 105008982 -94621168 - MLT1L LTR MaLR -236 379 39 359 320 165 16 chr5 105009278 105009472 -94620678 + MIR SINE MIR 18 240 -22 327 243 27 0 chr5 105009640 105009751 -94620399 + (TA)n Simple_repeat Simple_repeat 1 114 0 22 0 0 0 chr5 105011110 105011132 -94619018 + AT_rich Low_complexity Low_complexity 1 22 0 477 319 71 70 chr5 105011191 105011737 -94618413 - L2 LINE L2 0 3272 2733 833 308 49 62 chr5 105011899 105012315 -94617835 + LTR16B LTR ERVL 1 412 -52 1780 185 20 57 chr5 105012315 105012720 -94617430 - MLT1B LTR MaLR 0 390 1 833 308 49 62 chr5 105012720 105012771 -94617379 + LTR16B LTR ERVL 412 462 -2 25 0 0 0 chr5 105014229 105014254 -94615896 + AT_rich Low_complexity Low_complexity 1 25 0 2125 111 17 3 chr5 105015009 105015306 -94614844 - AluSg SINE Alu -7 303 3 411 267 158 0 chr5 105015390 105015468 -94614682 + MER58C DNA MER1_type 1 65 -2355 266 87 22 0 chr5 105015468 105015514 -94614636 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 411 267 158 0 chr5 105015514 105015600 -94614550 + MER58C DNA MER1_type 65 191 -24 36015 40 2 7 chr5 105015629 105020934 -94609216 - L1PA4 LINE L1 -1 6154 863 315 255 51 76 chr5 105021689 105021846 -94608304 - L2 LINE L2 -47 3266 3114 833 233 11 11 chr5 105021955 105022144 -94608006 - MER5A DNA MER1_type 0 189 1 390 304 80 22 chr5 105022165 105022303 -94607847 - MER5B DNA MER1_type -22 156 11 33 30 0 45 chr5 105022672 105022738 -94607412 + AT_rich Low_complexity Low_complexity 1 63 0 22 0 0 0 chr5 105023094 105023116 -94607034 + AT_rich Low_complexity Low_complexity 1 22 0 887 73 0 0 chr5 105023122 105023245 -94606905 - L1PA13 LINE L1 -6 6157 6035 348 94 0 0 chr5 105023278 105023331 -94606819 + (TG)n Simple_repeat Simple_repeat 1 53 0 225 191 32 16 chr5 105023750 105023813 -94606337 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 5928 238 38 14 chr5 105023938 105024570 -94605580 + L1MA9 LINE L1 2221 2836 -3310 1819 197 95 3 chr5 105024570 105024961 -94605189 + MSTA LTR MaLR 2 428 0 5928 238 38 14 chr5 105024961 105025995 -94604155 + L1MA9 LINE L1 2836 3928 -2218 3384 187 10 72 chr5 105026006 105026450 -94603700 + L1MA9 LINE L1 5131 5601 -711 2462 135 3 3 chr5 105026450 105026814 -94603336 - THE1B LTR MaLR 0 364 1 3384 187 10 72 chr5 105026814 105026840 -94603310 + L1MA9 LINE L1 5601 5627 -685 350 42 21 0 chr5 105026840 105026888 -94603262 + (TA)n Simple_repeat Simple_repeat 2 50 0 3384 187 10 72 chr5 105026888 105027472 -94602678 + L1MA9 LINE L1 5627 6312 0 265 320 98 16 chr5 105027973 105028055 -94602095 - L2 LINE L2 0 3313 3216 204 40 0 0 chr5 105028055 105028080 -94602070 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 265 320 98 16 chr5 105028080 105028119 -94602031 - L2 LINE L2 -97 3216 3182 336 257 29 44 chr5 105028230 105028366 -94601784 - L1MC4 LINE L1 0 8042 7909 2406 259 63 102 chr5 105028415 105030305 -94599845 - L1MC4a LINE L1 -378 7430 5614 341 232 32 72 chr5 105030385 105030510 -94599640 - L2 LINE L2 0 3313 3194 228 143 0 0 chr5 105030510 105030552 -94599598 + (TA)n Simple_repeat Simple_repeat 2 43 0 314 214 23 122 chr5 105031299 105031430 -94598720 + MLT1E2 LTR MaLR 28 145 -481 1181 242 69 75 chr5 105031499 105032111 -94598039 - L1MC4a LINE L1 -2101 4045 3438 236 247 0 7 chr5 105032241 105032391 -94597759 + (TA)n Simple_repeat Simple_repeat 1 149 0 21 57 0 0 chr5 105032791 105032826 -94597324 + AT_rich Low_complexity Low_complexity 1 35 0 203 175 0 0 chr5 105032904 105032944 -94597206 + T-rich Low_complexity Low_complexity 1 40 0 7656 25 0 0 chr5 105032949 105034183 -94595967 - L1PA2 LINE L1 0 6155 4922 3959 25 0 0 chr5 105034183 105034656 -94595494 + L1P LINE L1 4400 4872 -1274 2152 124 3 0 chr5 105034879 105035186 -94594964 - AluSx SINE Alu -4 308 1 206 277 84 36 chr5 105035661 105035744 -94594406 - MIR SINE MIR -100 162 76 2527 48 0 0 chr5 105035959 105036268 -94593882 - L1PA5 LINE L1 -9 6145 5837 2505 35 0 0 chr5 105036268 105036584 -94593566 + L1P LINE L1 5027 5342 -804 270 281 12 12 chr5 105037236 105037318 -94592832 - MLT1L LTR MaLR -386 229 148 42 40 0 14 chr5 105037799 105037813 -94592337 + AT_rich Low_complexity Low_complexity 1 14 -59 564 124 0 0 chr5 105037813 105037910 -94592240 + L1MA4 LINE L1 6201 6297 -3 42 40 0 14 chr5 105037910 105037969 -94592181 + AT_rich Low_complexity Low_complexity 14 73 0 189 344 0 43 chr5 105039359 105039452 -94590698 + L2 LINE L2 3184 3272 0 1704 262 91 20 chr5 105040045 105040124 -94590026 - HsTC2c DNA Tc2 -1203 695 623 1981 140 0 10 chr5 105040124 105040424 -94589726 - AluSq SINE Alu -16 297 1 1704 262 91 20 chr5 105040424 105040993 -94589157 - HsTC2c DNA Tc2 -1275 623 1 3103 80 40 0 chr5 105041021 105041448 -94588702 - MLT2A1 LTR ERVL 0 444 1 2050 112 0 3 chr5 105041602 105041928 -94588222 - AluSq SINE Alu 0 325 1 554 151 0 0 chr5 105042169 105042255 -94587895 + AluS SINE Alu 1 86 -227 21 95 0 0 chr5 105043278 105043341 -94586809 + AT_rich Low_complexity Low_complexity 1 63 0 15591 155 19 12 chr5 105043571 105046118 -94584032 - Tigger2 DNA MER2_type -2 2716 147 2129 122 0 0 chr5 105046118 105046412 -94583738 - AluSx SINE Alu -18 294 1 15591 155 19 12 chr5 105046412 105046561 -94583589 - Tigger2 DNA MER2_type -2571 147 1 220 323 198 10 chr5 105047697 105047793 -94582357 + MIR SINE MIR 13 126 -136 653 373 76 6 chr5 105047891 105048245 -94581905 - MLT1I LTR MaLR -6 403 25 261 0 0 0 chr5 105048323 105048352 -94581798 + (TA)n Simple_repeat Simple_repeat 1 29 0 425 295 12 30 chr5 105048368 105048534 -94581616 - Charlie8 DNA MER1_type -2167 250 88 2673 7 0 0 chr5 105048540 105048835 -94581315 + AluY SINE Alu 1 295 -16 21 0 0 0 chr5 105048927 105048948 -94581202 + AT_rich Low_complexity Low_complexity 1 21 0 2248 95 7 3 chr5 105049025 105049319 -94580831 + AluSc SINE Alu 1 295 -14 384 276 35 41 chr5 105049382 105049527 -94580623 - MARNA DNA Mariner -415 171 28 1465 106 20 0 chr5 105051307 105051505 -94578645 + AluSg/x SINE Alu 74 275 -35 22 0 0 0 chr5 105052388 105052410 -94577740 + AT_rich Low_complexity Low_complexity 1 22 0 186 348 26 26 chr5 105052415 105052530 -94577620 - MER5B DNA MER1_type -63 115 1 505 292 35 7 chr5 105052706 105052850 -94577300 - MIR SINE MIR -49 213 66 21 36 0 0 chr5 105053357 105053385 -94576765 + AT_rich Low_complexity Low_complexity 1 28 0 855 206 71 93 chr5 105053660 105054264 -94575886 - MER67C LTR ERV1 -4 510 1 274 235 25 0 chr5 105054347 105054428 -94575722 - L1MC4 LINE L1 -1346 6696 6614 289 113 56 0 chr5 105054428 105054499 -94575651 + (TCTA)n Simple_repeat Simple_repeat 1 75 0 359 278 0 0 chr5 105054504 105054594 -94575556 - L1MC4 LINE L1 -1339 6703 6614 951 125 0 0 chr5 105054597 105054828 -94575322 + (TA)n Simple_repeat Simple_repeat 1 232 0 216 0 0 0 chr5 105055138 105055162 -94574988 + (T)n Simple_repeat Simple_repeat 1 24 0 265 273 65 13 chr5 105056041 105056118 -94574032 - MLT1J LTR MaLR -202 309 229 774 285 114 88 chr5 105056149 105056683 -94573467 - MLT1F LTR MaLR 0 595 2 232 284 14 0 chr5 105057759 105057833 -94572317 - MLT1-int LTR MaLR -878 493 419 371 287 29 50 chr5 105057889 105058031 -94572119 - MLT1H1 LTR MaLR -383 172 36 229 219 47 0 chr5 105058092 105058156 -94571994 - MLT1L LTR MaLR -339 276 210 261 363 82 25 chr5 105060121 105060366 -94569784 + MIR SINE MIR 1 259 -3 725 332 73 70 chr5 105060706 105061666 -94568484 - L2 LINE L2 -8 3305 2341 1387 160 3 102 chr5 105061666 105061979 -94568171 + AluJb SINE Alu 1 282 -30 725 332 73 70 chr5 105061979 105062123 -94568027 - L2 LINE L2 -972 2341 2199 719 336 68 22 chr5 105062383 105062827 -94567323 - L2 LINE L2 -1107 2207 1744 683 46 0 11 chr5 105062882 105062969 -94567181 + AluSp/q SINE Alu 211 296 -17 324 148 161 0 chr5 105062996 105063077 -94567073 - L1P LINE L1 -810 5356 5263 1084 153 79 13 chr5 105063079 105063308 -94566842 + L1PA16 LINE L1 5923 6166 0 4775 106 0 9 chr5 105064323 105065009 -94565141 - L1PA8A LINE L1 -1 6130 5451 2069 112 16 26 chr5 105066085 105066398 -94563752 + AluSg SINE Alu 1 310 0 326 303 87 46 chr5 105066627 105066736 -94563414 - L1MC/D LINE L1 -1992 5816 5694 3512 204 23 63 chr5 105066736 105067746 -94562404 + LTR5 LTR ERVK 1 969 0 326 303 87 46 chr5 105067746 105067831 -94562319 - L1MC/D LINE L1 -2114 5694 5614 329 285 99 47 chr5 105068455 105068627 -94561523 - MLT1J1 LTR MaLR -146 300 120 2151 173 47 9 chr5 105068746 105069168 -94560982 + HSMAR2 DNA Mariner 2 439 -863 473 210 60 0 chr5 105069168 105069268 -94560882 + HSMAR2 DNA Mariner 874 979 -323 1962 155 0 7 chr5 105069446 105069756 -94560394 + AluSg SINE Alu 1 308 -2 9092 199 28 2 chr5 105069782 105072224 -94557926 - L1PA13 LINE L1 -1 6162 3645 291 85 0 0 chr5 105072224 105072271 -94557879 + (TG)n Simple_repeat Simple_repeat 2 48 0 9092 199 28 2 chr5 105072271 105072592 -94557558 - L1PA13 LINE L1 -2518 3645 3334 2937 149 31 23 chr5 105074084 105074607 -94555543 + MER1A DNA MER1_type 1 527 0 1131 291 62 40 chr5 105074899 105075352 -94554798 - L2 LINE L2 -769 2545 2083 223 337 11 22 chr5 105075401 105075490 -94554660 + MIR SINE MIR 23 110 -152 219 306 80 83 chr5 105075511 105075825 -94554325 + L2 LINE L2 2982 3294 -19 333 102 0 0 chr5 105076181 105076240 -94553910 + (CA)n Simple_repeat Simple_repeat 1 59 0 34 55 0 0 chr5 105077013 105077068 -94553082 + AT_rich Low_complexity Low_complexity 1 55 0 363 296 49 31 chr5 105077162 105077324 -94552826 - ERVL LTR ERVL -2769 2995 2831 2579 216 11 7 chr5 105077349 105077895 -94552255 + L1PA13 LINE L1 1369 1916 -4871 443 273 36 14 chr5 105077917 105078056 -94552094 - ERVL LTR ERVL -3426 2228 2087 409 269 93 9 chr5 105079006 105079177 -94550973 - LTR16C LTR ERVL 0 491 274 201 39 0 0 chr5 105080109 105080135 -94550015 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 363 310 43 22 chr5 105080171 105080400 -94549750 + L1M4 LINE L1 5191 5426 -743 1260 233 56 59 chr5 105080447 105080820 -94549330 + MLT1D LTR MaLR 134 505 0 226 214 29 35 chr5 105081995 105082168 -94547982 + (TA)n Simple_repeat Simple_repeat 1 172 0 203 253 0 13 chr5 105082207 105082282 -94547868 + (TA)n Simple_repeat Simple_repeat 2 75 0 743 72 0 0 chr5 105083437 105083534 -94546616 + AluY SINE Alu 198 294 -17 1410 162 31 0 chr5 105083910 105084284 -94545866 + L1M2 LINE L1 5105 5487 -743 338 351 0 11 chr5 105085227 105085321 -94544829 - MER91A DNA MER1_type -99 97 5 297 126 68 29 chr5 105085572 105085675 -94544475 + (TA)n Simple_repeat Simple_repeat 1 107 0 26 0 0 0 chr5 105085744 105085770 -94544380 + AT_rich Low_complexity Low_complexity 1 26 0 235 167 30 0 chr5 105086089 105086155 -94543995 + (TA)n Simple_repeat Simple_repeat 2 69 0 294 73 0 0 chr5 105086155 105086196 -94543954 + (CA)n Simple_repeat Simple_repeat 2 42 0 30 0 0 0 chr5 105087565 105087595 -94542555 + AT_rich Low_complexity Low_complexity 1 30 0 318 214 18 54 chr5 105087767 105087879 -94542271 + (TA)n Simple_repeat Simple_repeat 1 108 0 24 32 0 0 chr5 105087923 105087954 -94542196 + AT_rich Low_complexity Low_complexity 1 31 0 395 309 47 26 chr5 105088187 105088378 -94541772 - MLT1I LTR MaLR -139 270 76 603 324 69 39 chr5 105088500 105088907 -94541243 + L2 LINE L2 1851 2269 -1045 6774 63 16 0 chr5 105089065 105089737 -94540413 - L1PA7 LINE L1 -2 6152 5493 2137 131 3 0 chr5 105089737 105090042 -94540108 - AluSp SINE Alu -7 306 1 6774 63 16 0 chr5 105090042 105090794 -94539356 - L1PA7 LINE L1 -661 5493 4727 4666 107 9 0 chr5 105090794 105091478 -94538672 + L1PA7 LINE L1 4029 4718 -1428 760 339 71 19 chr5 105091478 105091856 -94538294 + L2 LINE L2 2458 2855 -459 22 70 0 0 chr5 105092031 105092074 -94538076 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr5 105092735 105092776 -94537374 + AT_rich Low_complexity Low_complexity 1 41 0 246 374 9 0 chr5 105092915 105093022 -94537128 - L2 LINE L2 -92 3221 3114 188 366 44 44 chr5 105093285 105093468 -94536682 - L2 LINE L2 -572 2742 2560 37 39 0 0 chr5 105094001 105094052 -94536098 + AT_rich Low_complexity Low_complexity 1 51 0 222 283 22 22 chr5 105095296 105095388 -94534762 - MIR SINE MIR -99 163 72 234 350 48 10 chr5 105096115 105096218 -94533932 + L2 LINE L2 3188 3294 -19 2411 84 7 0 chr5 105096704 105097012 -94533138 - AluSq SINE Alu -3 310 1 545 138 0 0 chr5 105097190 105097270 -94532880 + FRAM SINE Alu 22 101 -75 958 240 100 17 chr5 105099269 105099658 -94530492 + MER39 LTR ERV1 1 583 -124 794 183 104 0 chr5 105099828 105099992 -94530158 + MER61A LTR ERV1 1 181 -162 310 54 0 0 chr5 105100009 105100046 -94530104 - MER61-int LTR ERV1 -2425 2792 2756 17214 100 17 10 chr5 105100059 105102830 -94527320 + MER61A-int LTR ERV1 2383 5216 -1 1835 151 54 21 chr5 105102831 105103163 -94526987 + MER61A LTR ERV1 1 343 0 1132 195 38 104 chr5 105103364 105103759 -94526391 + MLT2D LTR ERVL 5 373 -41 347 300 0 0 chr5 105103762 105103852 -94526298 - L1MC4 LINE L1 -1339 6703 6614 239 137 0 20 chr5 105103862 105103913 -94526237 - LTR66 LTR ERVL -171 439 390 256 109 0 109 chr5 105103947 105104002 -94526148 + MLT2B1 LTR ERVL 458 506 -14 1288 78 0 39 chr5 105105312 105105492 -94524658 - AluY SINE Alu -7 304 132 411 257 47 125 chr5 105105627 105106185 -94523965 + L1MC4a LINE L1 7258 7683 -125 293 232 0 14 chr5 105106388 105106457 -94523693 - MER69 DNA AcHobo -1 2525 2458 1344 7 0 0 chr5 105106458 105106610 -94523540 + L1HS LINE L1 6004 6155 0 22 56 0 0 chr5 105106620 105106656 -94523494 + AT_rich Low_complexity Low_complexity 1 36 0 828 267 38 65 chr5 105106768 105107139 -94523011 - LTR16A LTR ERVL -76 374 14 405 252 9 0 chr5 105107662 105107769 -94522381 - MER69 DNA AcHobo -268 2258 2151 638 247 21 0 chr5 105107801 105107991 -94522159 - MER69 DNA AcHobo -444 2082 1889 686 282 86 9 chr5 105107993 105108213 -94521937 - MER69 DNA AcHobo -2083 443 207 281 234 31 0 chr5 105108208 105108272 -94521878 - MER69 DNA AcHobo -2458 68 3 * 2270 95 0 0 chr5 105110592 105110888 -94519262 + AluSc SINE Alu 1 296 -13 600 282 13 0 chr5 105110896 105111045 -94519105 + MER63A DNA MER1_type 60 210 0 21 36 0 0 chr5 105111568 105111596 -94518554 + AT_rich Low_complexity Low_complexity 1 28 0 1372 200 20 27 chr5 105111799 105112094 -94518056 - THE1B LTR MaLR 0 364 72 1982 122 7 10 chr5 105112132 105112428 -94517722 + AluSx SINE Alu 1 295 -17 593 223 8 0 chr5 105113618 105113739 -94516411 + L1M4 LINE L1 7 128 -6414 364 306 66 37 chr5 105113897 105114168 -94515982 - L1M4 LINE L1 -1538 4608 4330 345 372 30 25 chr5 105114387 105114586 -94515564 - MIR3 SINE MIR -3 205 6 22 70 0 0 chr5 105116808 105116851 -94513299 + AT_rich Low_complexity Low_complexity 1 43 0 3534 157 26 41 chr5 105117266 105118143 -94512007 + pTR5 LTR ERV1 6 277 -437 247 265 31 20 chr5 105118143 105118241 -94511909 + LTR30 LTR ERV1 544 642 -80 2340 101 3 0 chr5 105118241 105118567 -94511583 + pTR5 LTR ERV1 66 392 -2046 297 286 24 24 chr5 105118616 105118700 -94511450 + L2 LINE L2 3187 3270 -2 255 291 246 0 chr5 105119722 105119832 -94510318 + MER91C DNA MER1_type 1 137 -3 288 313 81 0 chr5 105120236 105120335 -94509815 + L2 LINE L2 3116 3222 -50 9109 45 3 0 chr5 105120493 105121625 -94508525 - L1P LINE L1 -1779 4367 3232 2725 92 0 13 chr5 105123602 105123982 -94506168 - THE1C LTR MaLR 0 375 1 2430 153 30 0 chr5 105125153 105125552 -94504598 - MSTA LTR MaLR 0 428 18 4728 177 33 5 chr5 105125562 105126409 -94503741 - MSTA-int LTR MaLR -5 1646 776 279 0 0 0 chr5 105126423 105126454 -94503696 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1959 118 0 11 chr5 105126455 105126735 -94503415 - AluSc SINE Alu -32 277 1 1125 158 0 5 chr5 105126747 105126937 -94503213 - MSTA LTR MaLR -239 189 1 428 324 65 16 chr5 105127290 105127475 -94502675 - MIR SINE MIR -43 219 26 1630 175 19 25 chr5 105128639 105128953 -94501197 + AluJb SINE Alu 1 312 0 288 284 124 47 chr5 105129110 105129279 -94500871 + MIR SINE MIR 32 213 -49 30 59 0 0 chr5 105129580 105129631 -94500519 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr5 105129840 105129862 -94500288 + AT_rich Low_complexity Low_complexity 1 22 0 665 288 59 14 chr5 105130168 105130387 -94499763 - MIR SINE MIR -26 236 8 25 0 0 0 chr5 105130644 105130669 -94499481 + AT_rich Low_complexity Low_complexity 1 25 0 25 83 0 0 chr5 105130783 105130843 -94499307 + AT_rich Low_complexity Low_complexity 1 60 0 1305 181 15 0 chr5 105131080 105131350 -94498800 - L1MA4 LINE L1 -4 6296 6023 218 231 19 0 chr5 105131763 105131815 -94498335 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 7456 31 2 1 chr5 105132025 105133710 -94496440 + L1PA4 LINE L1 4468 6154 -1 411 267 158 0 chr5 105133739 105133825 -94496325 - MER58C DNA MER1_type -2229 191 120 266 87 22 0 chr5 105133825 105133871 -94496279 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 411 267 158 0 chr5 105133871 105133949 -94496201 - MER58C DNA MER1_type -2300 120 1 2113 118 16 3 chr5 105134032 105134336 -94495814 + AluSg SINE Alu 3 310 0 25 0 0 0 chr5 105135083 105135108 -94495042 + AT_rich Low_complexity Low_complexity 1 25 0 220 217 0 0 chr5 105135546 105135592 -94494558 + (CATATA)n Simple_repeat Simple_repeat 5 50 0 833 308 49 62 chr5 105136564 105136615 -94493535 - LTR16B LTR ERVL -2 462 412 1780 185 20 57 chr5 105136615 105137020 -94493130 + MLT1B LTR MaLR 1 390 0 833 308 49 62 chr5 105137020 105137436 -94492714 - LTR16B LTR ERVL -52 412 1 507 314 68 76 chr5 105137598 105138145 -94492005 + L2 LINE L2 2733 3272 0 22 0 0 0 chr5 105138204 105138226 -94491924 + AT_rich Low_complexity Low_complexity 1 22 0 327 243 27 0 chr5 105139585 105139696 -94490454 + (TA)n Simple_repeat Simple_repeat 1 114 0 329 323 164 20 chr5 105139864 105140059 -94490091 - MIR SINE MIR -22 240 18 657 288 59 14 chr5 105140468 105140687 -94489463 - MIR SINE MIR -26 236 8 25 0 0 0 chr5 105140944 105140969 -94489181 + AT_rich Low_complexity Low_complexity 1 25 0 25 83 0 0 chr5 105141083 105141143 -94489007 + AT_rich Low_complexity Low_complexity 1 60 0 1305 181 15 0 chr5 105141380 105141650 -94488500 - L1MA4 LINE L1 -4 6296 6023 7020 60 18 1 chr5 105142324 105143995 -94486155 + L1PA5 LINE L1 4468 6153 -1 976 97 0 8 chr5 105144230 105144364 -94485786 + AluSq/x SINE Alu 1 133 -180 24 67 0 0 chr5 105145065 105145110 -94485040 + AT_rich Low_complexity Low_complexity 1 45 0 655 264 54 16 chr5 105145260 105145518 -94484632 - MER20B DNA MER1_type -2 781 514 1138 167 13 13 chr5 105145637 105145864 -94484286 + L1PA16 LINE L1 5940 6166 0 1489 173 40 14 chr5 105146053 105146364 -94483786 - AluJb SINE Alu 0 318 1 432 0 0 0 chr5 105146517 105146565 -94483585 + (TG)n Simple_repeat Simple_repeat 1 48 0 460 305 119 13 chr5 105146574 105146892 -94483258 - MER20B DNA MER1_type -258 525 174 22 35 0 0 chr5 105147516 105147545 -94482605 + AT_rich Low_complexity Low_complexity 1 29 0 395 209 9 0 chr5 105147578 105147688 -94482462 + (TA)n Simple_repeat Simple_repeat 1 111 0 659 320 35 86 chr5 105148869 105149185 -94480965 - MLT1K LTR MaLR -1 587 303 805 74 16 0 chr5 105149185 105149307 -94480843 + (GA)n Simple_repeat Simple_repeat 1 124 0 659 320 35 86 chr5 105149307 105149480 -94480670 - MLT1K LTR MaLR -285 303 123 4212 181 57 42 chr5 105150149 105151133 -94479017 - L1MA6 LINE L1 -6 6294 5326 234 0 0 0 chr5 105151133 105151159 -94478991 + (ATG)n Simple_repeat Simple_repeat 3 28 0 2176 116 3 7 chr5 105151169 105151470 -94478680 - AluSq SINE Alu -13 300 1 4212 181 57 42 chr5 105151470 105151498 -94478652 - L1MA6 LINE L1 -982 5318 5254 3561 214 54 8 chr5 105151491 105152483 -94477667 - L1MA6 LINE L1 -2115 4031 2994 * 526 298 66 18 chr5 105152775 105153003 -94477147 + MIR SINE MIR 11 249 -13 204 125 0 0 chr5 105153688 105153720 -94476430 + (T)n Simple_repeat Simple_repeat 1 32 0 300 282 111 39 chr5 105154095 105154329 -94475821 - L1ME4a LINE L1 -11 6110 5860 329 343 7 0 chr5 105154542 105154688 -94475462 - L1ME4a LINE L1 -453 5668 5522 1271 296 27 24 chr5 105154800 105155351 -94474799 - L1PA13 LINE L1 -4852 2729 2177 332 315 103 0 chr5 105155573 105155738 -94474412 - L1PA13 LINE L1 -5280 2294 2088 789 411 48 14 chr5 105155816 105156383 -94473767 - L1PA13 LINE L1 -6200 1374 789 33 66 0 0 chr5 105156664 105156725 -94473425 + AT_rich Low_complexity Low_complexity 1 61 0 192 262 16 0 chr5 105157299 105157360 -94472790 + L2 LINE L2 3190 3251 -62 2250 113 3 0 chr5 105157386 105157697 -94472453 - AluSq SINE Alu -1 312 1 254 28 0 28 chr5 105158667 105158703 -94471447 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 29 60 0 0 chr5 105160483 105160533 -94469617 + AT_rich Low_complexity Low_complexity 1 50 0 6708 154 15 23 chr5 105160824 105162908 -94467242 - L1PA13 LINE L1 -4 6159 4084 263 211 0 0 chr5 105162909 105162961 -94467189 - L1PA13 LINE L1 -2657 3489 3438 3933 154 0 3 chr5 105163112 105163754 -94466396 - L1P LINE L1 -2069 4077 3438 200 259 17 35 chr5 105163851 105163909 -94466241 + MIR SINE MIR 99 155 -107 1957 200 40 21 chr5 105164789 105165209 -94464941 - MSTC LTR MaLR 0 428 1 29 60 0 0 chr5 105165437 105165487 -94464663 + AT_rich Low_complexity Low_complexity 1 50 0 1854 266 57 18 chr5 105165522 105166014 -94464136 + LTR40a LTR ERVL 7 517 -2 2230 104 0 3 chr5 105166059 105166358 -94463792 - AluSx SINE Alu -14 298 1 336 372 22 0 chr5 105166364 105166501 -94463649 - MIR SINE MIR -121 141 2 958 264 40 79 chr5 105166975 105167419 -94462731 + MLT1K LTR MaLR 122 548 -40 26 50 0 0 chr5 105167654 105167694 -94462456 + AT_rich Low_complexity Low_complexity 1 40 0 1399 164 38 67 chr5 105167732 105168105 -94462045 + L1MA8 LINE L1 5928 6289 -2 198 91 0 0 chr5 105168900 105168933 -94461217 + (CA)n Simple_repeat Simple_repeat 2 34 0 428 300 26 73 chr5 105170764 105170954 -94459196 + MIR SINE MIR 3 178 -84 1143 242 138 37 chr5 105170954 105171412 -94458738 + MLT1D LTR MaLR 2 505 0 428 300 26 73 chr5 105171412 105171494 -94458656 + MIR SINE MIR 178 262 0 349 337 91 30 chr5 105171565 105171764 -94458386 - MIR SINE MIR -12 250 40 1543 239 66 68 chr5 105172055 105172707 -94457443 + MLT1E1 LTR MaLR 4 654 0 411 224 0 0 chr5 105174551 105174658 -94455492 + (TA)n Simple_repeat Simple_repeat 2 108 0 495 211 19 0 chr5 105174694 105174850 -94455300 + (TA)n Simple_repeat Simple_repeat 1 159 0 204 179 0 0 chr5 105174884 105174923 -94455227 + (TA)n Simple_repeat Simple_repeat 1 39 0 289 149 30 0 chr5 105175025 105175092 -94455058 + (TA)n Simple_repeat Simple_repeat 1 69 0 26 30 0 0 chr5 105175112 105175145 -94455005 + AT_rich Low_complexity Low_complexity 1 33 0 449 94 72 0 chr5 105175145 105175283 -94454867 + (TA)n Simple_repeat Simple_repeat 1 148 0 310 164 58 0 chr5 105175296 105175400 -94454750 + (TA)n Simple_repeat Simple_repeat 1 110 0 209 316 25 0 chr5 105175838 105175917 -94454233 + CT-rich Low_complexity Low_complexity 2 82 0 227 407 26 0 chr5 105175919 105176032 -94454118 - L2 LINE L2 -3 3269 3154 279 290 0 0 chr5 105176297 105176366 -94453784 + L2 LINE L2 3201 3269 -3 24 0 0 0 chr5 105176535 105176559 -94453591 + AT_rich Low_complexity Low_complexity 1 24 0 1676 61 0 0 chr5 105177278 105177492 -94452658 + AluY SINE Alu 97 310 -1 2235 266 39 15 chr5 105178679 105179543 -94450607 + L1M4 LINE L1 4312 5196 -950 945 98 0 182 chr5 105179558 105179794 -94450356 + 7SK RNA RNA 1 193 0 28777 38 19 7 chr5 105179977 105183830 -94446320 + L1P1 LINE L1 1631 5520 -635 1698 148 52 24 chr5 105236684 105236975 -94393175 - AluJo SINE Alu -13 299 1 2439 72 0 7 chr5 105237026 105237330 -94392820 + AluY SINE Alu 1 302 -9 615 253 13 7 chr5 105237453 105237607 -94392543 - MIR SINE MIR -105 157 3 449 161 183 0 chr5 105237608 105237701 -94392449 - Tigger4(Zombi) DNA MER2_type 0 2731 2622 1052 149 0 0 chr5 105237706 105237867 -94392283 + AluSg/x SINE Alu 138 298 -12 537 130 11 11 chr5 105237867 105237959 -94392191 - Tigger4(Zombi) DNA MER2_type -95 2636 2545 949 208 0 0 chr5 105237959 105238118 -94392032 - AluJb SINE Alu -20 292 134 1135 216 65 85 chr5 105238167 105238616 -94391534 - MER21B LTR ERV1 -125 738 299 1583 203 10 0 chr5 105239666 105239962 -94390188 + AluJo SINE Alu 1 299 -13 228 35 0 0 chr5 105240149 105240178 -94389972 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 24 53 0 0 chr5 105240806 105240844 -94389306 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 105241012 105241034 -94389116 + AT_rich Low_complexity Low_complexity 1 22 0 282 289 33 0 chr5 105241698 105241850 -94388300 + (TA)n Simple_repeat Simple_repeat 1 157 0 297 0 0 0 chr5 105241850 105241883 -94388267 + (CA)n Simple_repeat Simple_repeat 2 34 0 477 267 19 6 chr5 105241904 105242065 -94388085 + L1ME2 LINE L1 5089 5251 -895 284 174 58 29 chr5 105242067 105242136 -94388014 - MADE1 DNA Mariner 0 80 10 488 227 21 19 chr5 105242144 105242384 -94387766 + L1ME2 LINE L1 5255 5549 -615 273 29 0 0 chr5 105242386 105242420 -94387730 + (CA)n Simple_repeat Simple_repeat 2 35 0 910 259 98 42 chr5 105242427 105242929 -94387221 + L1ME2 LINE L1 5618 6147 -17 315 23 23 0 chr5 105242957 105243000 -94387150 + L1P LINE L1 3669 3712 -2434 2881 32 3 0 chr5 105243003 105243343 -94386807 + L1P LINE L1 3981 4321 -1825 2357 46 0 0 chr5 105244425 105244736 -94385414 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 105245819 105245840 -94384310 + AT_rich Low_complexity Low_complexity 1 21 0 318 257 40 20 chr5 105246203 105246304 -94383846 + L2 LINE L2 3168 3270 -2 213 360 82 50 chr5 105246453 105246770 -94383380 + L2 LINE L2 155 481 -2833 343 338 121 38 chr5 105246970 105247316 -94382834 + L2 LINE L2 517 891 -2423 226 196 59 0 chr5 105247558 105247609 -94382541 - MIR SINE MIR -90 172 119 271 258 0 0 chr5 105247745 105247807 -94382343 + Charlie5 DNA MER1_type 1 62 -2550 617 288 49 56 chr5 105247843 105248149 -94382001 - HERV16 LTR ERVL -4432 564 261 237 248 153 58 chr5 105248338 105248475 -94381675 - LTR16A LTR ERVL 0 450 301 1033 364 37 23 chr5 105248680 105249070 -94381080 + ERVL LTR ERVL 3121 3527 -2237 1391 252 37 3 chr5 105249070 105249419 -94380731 - MLT1A1 LTR MaLR -4 361 1 1033 364 37 23 chr5 105249419 105249736 -94380414 + ERVL LTR ERVL 3527 3838 -1926 1731 340 74 23 chr5 105249903 105250352 -94379798 + ERVL LTR ERVL 4055 4480 -1284 192 40 0 0 chr5 105250352 105250377 -94379773 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1731 340 74 23 chr5 105250377 105251096 -94379054 + ERVL LTR ERVL 4480 5282 -482 485 304 70 9 chr5 105251364 105251578 -94378572 - L2 LINE L2 0 3313 3087 251 316 42 11 chr5 105251982 105252077 -94378073 - L3 LINE CR1 -1399 178 81 328 310 68 36 chr5 105252109 105252278 -94377872 + MIR SINE MIR 20 190 -60 271 321 18 54 chr5 105252293 105252405 -94377745 - MER5B DNA MER1_type -70 108 1 851 267 167 12 chr5 105253637 105254045 -94376105 - L1ME3A LINE L1 -4 6166 5696 2384 63 3 31 chr5 105254046 105254363 -94375787 - AluY SINE Alu -2 309 2 4338 227 47 31 chr5 105254397 105256483 -94373667 - L1MB7 LINE L1 -286 5898 3777 4438 227 27 17 chr5 105256496 105258318 -94371832 - L1MC2 LINE L1 -25 6319 4480 2307 81 7 3 chr5 105258318 105258616 -94371534 - AluY SINE Alu -12 299 1 4438 227 27 17 chr5 105258616 105258804 -94371346 - L1MC2 LINE L1 -1864 4480 4295 1589 148 29 4 chr5 105259059 105259362 -94370788 + L1PA16 LINE L1 5814 6151 -10 27 29 0 0 chr5 105259476 105259510 -94370640 + AT_rich Low_complexity Low_complexity 1 34 0 23 54 0 0 chr5 105259548 105259585 -94370565 + AT_rich Low_complexity Low_complexity 1 37 0 990 132 38 6 chr5 105259749 105259908 -94370242 - MSTB LTR MaLR -102 324 161 402 270 16 15 chr5 105260410 105260545 -94369605 - MIR SINE MIR -40 168 43 2185 120 0 9 chr5 105260852 105261168 -94368982 - AluSp SINE Alu 0 313 1 600 209 41 77 chr5 105261775 105261971 -94368179 + MER63A DNA MER1_type 1 189 -21 947 232 81 18 chr5 105262016 105262301 -94367849 - MER58B DNA MER1_type -1 340 38 367 225 7 56 chr5 105262620 105262762 -94367388 + MER112 DNA MER1_type 67 201 -59 310 303 34 34 chr5 105263591 105263769 -94366381 + MIR SINE MIR 29 206 -56 544 338 59 28 chr5 105264912 105265453 -94364697 - L1ME3 LINE L1 -309 5853 5296 719 322 74 22 chr5 105265458 105265958 -94364192 - L1ME3 LINE L1 -879 5267 4742 731 352 83 28 chr5 105266006 105266509 -94363641 - L3 LINE CR1 -41 1536 1006 313 419 52 16 chr5 105267571 105267762 -94362388 - L2 LINE L2 0 3272 3075 2136 85 0 39 chr5 105268986 105269291 -94360859 - AluSg SINE Alu -17 293 1 215 179 45 15 chr5 105270689 105270703 -94359447 + A-rich Low_complexity Low_complexity 2 14 -56 774 160 0 30 chr5 105270703 105270834 -94359316 + FLAM_C SINE Alu 1 127 -6 215 179 45 15 chr5 105270834 105270886 -94359264 + A-rich Low_complexity Low_complexity 14 70 0 23 0 0 0 chr5 105270944 105270967 -94359183 + AT_rich Low_complexity Low_complexity 1 23 0 2091 106 14 0 chr5 105271645 105271770 -94358380 + AluY SINE Alu 1 123 -188 243 0 0 0 chr5 105271770 105271797 -94358353 + (CA)n Simple_repeat Simple_repeat 2 28 0 2091 106 14 0 chr5 105271797 105271963 -94358187 + AluY SINE Alu 123 296 -15 597 294 76 5 chr5 105273215 105273426 -94356724 - MIR SINE MIR -8 254 29 203 239 0 0 chr5 105273705 105273751 -94356399 - L2 LINE L2 -10 3303 3258 438 349 78 9 chr5 105275363 105275581 -94354569 + MIR SINE MIR 22 254 -8 2460 147 23 0 chr5 105275594 105275982 -94354168 - MSTB1 LTR MaLR -35 397 1 2357 46 0 0 chr5 105277083 105277394 -94352756 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 105278477 105278498 -94351652 + AT_rich Low_complexity Low_complexity 1 21 0 318 257 40 20 chr5 105278861 105278962 -94351188 + L2 LINE L2 3168 3270 -2 213 360 82 50 chr5 105279111 105279428 -94350722 + L2 LINE L2 155 481 -2833 437 348 101 35 chr5 105279628 105280053 -94350097 + L2 LINE L2 517 969 -2345 215 340 0 0 chr5 105280072 105280122 -94350028 + MIR SINE MIR 21 70 -192 545 332 128 52 chr5 105281070 105282089 -94348061 + L2 LINE L2 1583 2678 -636 22 35 0 0 chr5 105282917 105282946 -94347204 + AT_rich Low_complexity Low_complexity 1 29 0 580 254 89 64 chr5 105283603 105283883 -94346267 - L2 LINE L2 -1 3312 3026 218 337 93 19 chr5 105285677 105285882 -94344268 - L2 LINE L2 -434 2880 2661 344 299 40 62 chr5 105286244 105286362 -94343788 - MER5B DNA MER1_type 0 178 64 180 0 0 0 chr5 105286362 105286382 -94343768 + (ATTTG)n Simple_repeat Simple_repeat 1 20 0 344 299 40 62 chr5 105286382 105286440 -94343710 - MER5B DNA MER1_type -114 64 6 7685 24 0 4 chr5 105286636 105287950 -94342200 + L1PA3 LINE L1 4927 6236 0 280 353 29 17 chr5 105288014 105288187 -94341963 + L2 LINE L2 2196 2370 -944 236 287 89 20 chr5 105288788 105288889 -94341261 + MIR SINE MIR 104 211 -51 2301 70 39 0 chr5 105290675 105290961 -94339189 - AluY SINE Alu -14 297 1 7833 70 5 4 chr5 105291632 105292638 -94337512 + LTR13 LTR ERVK 1 1007 0 319 124 73 19 chr5 105293151 105293221 -94336929 + MLT1A2 LTR MaLR 297 374 0 22 0 0 0 chr5 105293256 105293278 -94336872 + AT_rich Low_complexity Low_complexity 1 22 0 1726 198 5 49 chr5 105293476 105293789 -94336361 + MLT1A1 LTR MaLR 1 298 -67 2100 111 7 0 chr5 105293789 105294102 -94336048 + AluSg SINE Alu 1 315 0 1726 198 5 49 chr5 105294102 105294156 -94335994 + MLT1A1 LTR MaLR 298 353 -12 33 0 0 0 chr5 105294198 105294231 -94335919 + AT_rich Low_complexity Low_complexity 1 33 0 267 380 47 56 chr5 105295151 105295385 -94334765 + L2 LINE L2 2242 2473 -841 22 0 0 0 chr5 105295637 105295659 -94334491 + AT_rich Low_complexity Low_complexity 1 22 0 348 320 10 0 chr5 105295698 105295798 -94334352 - MIR SINE MIR -63 145 45 238 289 79 0 chr5 105295958 105296034 -94334116 - L2 LINE L2 0 3313 3232 243 317 211 28 chr5 105298180 105298644 -94331506 - L2 LINE L2 -624 2690 2142 13251 144 30 43 chr5 105298999 105299130 -94331020 - Tigger1 DNA MER2_type -6 2412 2281 2098 142 3 29 chr5 105299130 105299474 -94330676 + MER1B DNA MER1_type 3 337 0 13251 144 30 43 chr5 105299474 105300452 -94329698 - Tigger1 DNA MER2_type -137 2281 1292 1542 207 0 11 chr5 105300452 105300727 -94329423 - AluJo SINE Alu -26 286 15 13251 144 30 43 chr5 105300727 105300784 -94329366 - Tigger1 DNA MER2_type -1126 1292 1236 11588 78 11 1 chr5 105300784 105302085 -94328065 + L1PA7 LINE L1 3742 5028 -1126 955 8 33 0 chr5 105302085 105302207 -94327943 + (TTCC)n Simple_repeat Simple_repeat 1 126 0 8275 81 104 38 chr5 105302208 105303454 -94326696 + SVA Other Other 58 1386 0 11588 78 11 1 chr5 105303454 105304563 -94325587 + L1PA7 LINE L1 5027 6152 -2 13251 144 30 43 chr5 105304563 105304586 -94325564 - Tigger1 DNA MER2_type -1182 1236 1214 1497 183 69 14 chr5 105304586 105304875 -94325275 + AluJb SINE Alu 1 305 -7 13251 144 30 43 chr5 105304875 105306125 -94324025 - Tigger1 DNA MER2_type -1204 1214 1 22 56 0 0 chr5 105306477 105306513 -94323637 + AT_rich Low_complexity Low_complexity 1 36 0 970 273 143 20 chr5 105309594 105310097 -94320053 - L2 LINE L2 -1 3312 2752 6552 192 126 30 chr5 105310736 105312215 -94317935 + MER52A LTR ERV1 43 1755 0 321 258 96 60 chr5 105312288 105312455 -94317695 - L2 LINE L2 -4 3309 3137 1276 237 35 77 chr5 105312646 105313195 -94316955 + MER39 LTR ERV1 1 707 0 225 314 0 0 chr5 105313596 105313682 -94316468 + L1ME LINE L1 5782 5867 -303 228 196 59 0 chr5 105313962 105314013 -94316137 - MIR SINE MIR -90 172 119 270 258 0 0 chr5 105314149 105314211 -94315939 + Charlie5 DNA MER1_type 1 62 -2550 624 288 49 56 chr5 105314247 105314553 -94315597 - HERV16 LTR ERVL -4432 564 261 238 248 153 58 chr5 105314742 105314879 -94315271 - LTR16A LTR ERVL 0 450 301 1037 364 37 23 chr5 105315084 105315474 -94314676 + ERVL LTR ERVL 3121 3527 -2237 1385 252 37 3 chr5 105315474 105315823 -94314327 - MLT1A1 LTR MaLR -4 361 1 1037 364 37 23 chr5 105315823 105316140 -94314010 + ERVL LTR ERVL 3527 3838 -1926 808 346 70 33 chr5 105316307 105316756 -94313394 + ERVL LTR ERVL 4055 4541 -1223 192 40 0 0 chr5 105316756 105316781 -94313369 + (TTG)n Simple_repeat Simple_repeat 2 26 0 808 346 70 33 chr5 105316781 105317027 -94313123 + ERVL LTR ERVL 4541 4776 -988 853 338 54 20 chr5 105317053 105317500 -94312650 + ERVL LTR ERVL 4821 5282 -482 482 320 86 34 chr5 105317944 105318213 -94311937 + LTR16C LTR ERVL 209 491 0 2177 127 21 34 chr5 105319206 105319584 -94310566 - THE1C LTR MaLR 0 375 3 2238 68 0 39 chr5 105321468 105321801 -94308349 - AluY SINE Alu 0 311 1 694 324 62 0 chr5 105322464 105322674 -94307476 + MIR SINE MIR 15 237 -25 238 237 21 32 chr5 105324822 105324915 -94305235 + (TA)n Simple_repeat Simple_repeat 1 92 0 29 60 0 0 chr5 105325615 105325665 -94304485 + AT_rich Low_complexity Low_complexity 1 50 0 2259 107 3 3 chr5 105326194 105326503 -94303647 + AluSx SINE Alu 3 311 -1 198 0 0 0 chr5 105326983 105327005 -94303145 + (CA)n Simple_repeat Simple_repeat 2 23 0 27 29 0 0 chr5 105327220 105327254 -94302896 + AT_rich Low_complexity Low_complexity 1 34 0 21 57 0 0 chr5 105327664 105327699 -94302451 + AT_rich Low_complexity Low_complexity 1 35 0 2292 62 28 0 chr5 105327922 105328210 -94301940 + AluY SINE Alu 1 296 -15 235 257 119 9 chr5 105332195 105332304 -94297846 - L1ME4a LINE L1 -3 6118 5998 22 0 0 0 chr5 105332406 105332428 -94297722 + AT_rich Low_complexity Low_complexity 1 22 0 474 88 0 0 chr5 105332428 105332496 -94297654 + (TTCC)n Simple_repeat Simple_repeat 1 68 0 534 125 0 0 chr5 105333511 105333591 -94296559 - MADE1 DNA Mariner 0 80 1 2054 94 0 88 chr5 105333958 105334288 -94295862 - AluSg SINE Alu -9 301 1 486 271 60 83 chr5 105334969 105335187 -94294963 - MIR SINE MIR -13 249 37 254 309 73 15 chr5 105336097 105336233 -94293917 - MIR SINE MIR -46 216 73 596 219 9 0 chr5 105336506 105336620 -94293530 + MER63A DNA MER1_type 88 202 -8 192 354 0 0 chr5 105336910 105336958 -94293192 + L2 LINE L2 3217 3264 -8 244 350 0 39 chr5 105337069 105337172 -94292978 + MIR SINE MIR 56 154 -108 262 123 18 0 chr5 105337494 105337551 -94292599 - L1MA8 LINE L1 -6 6285 6228 3662 105 12 23 chr5 105339692 105339893 -94290257 + MER41A LTR ERV1 1 203 -351 2116 58 0 0 chr5 105339893 105340191 -94289959 + AluY SINE Alu 22 319 0 3662 105 12 23 chr5 105340191 105340547 -94289603 + MER41A LTR ERV1 203 554 0 1558 203 10 0 chr5 105341801 105342097 -94288053 + AluJo SINE Alu 1 299 -13 228 35 0 0 chr5 105342284 105342313 -94287837 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 24 53 0 0 chr5 105342941 105342979 -94287171 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 105343147 105343169 -94286981 + AT_rich Low_complexity Low_complexity 1 22 0 282 289 33 0 chr5 105343832 105343984 -94286166 + (TA)n Simple_repeat Simple_repeat 1 157 0 243 0 0 0 chr5 105343984 105344011 -94286139 + (CA)n Simple_repeat Simple_repeat 2 28 0 2584 30 3 0 chr5 105346652 105346951 -94283199 + AluY SINE Alu 1 300 -11 788 312 50 0 chr5 105347240 105347458 -94282692 + MIR SINE MIR 13 241 -21 27 0 0 0 chr5 105348815 105348842 -94281308 + AT_rich Low_complexity Low_complexity 1 27 0 32 0 0 0 chr5 105349212 105349244 -94280906 + AT_rich Low_complexity Low_complexity 1 32 0 298 330 52 17 chr5 105350183 105350298 -94279852 + L2 LINE L2 3154 3272 0 543 307 118 0 chr5 105350499 105350711 -94279439 + MIR SINE MIR 26 262 0 368 351 127 22 chr5 105350724 105351040 -94279110 + L2 LINE L2 2924 3272 0 209 250 18 0 chr5 105351134 105351190 -94278960 + (TA)n Simple_repeat Simple_repeat 1 57 0 2052 191 55 0 chr5 105351587 105351991 -94278159 + MSTB LTR MaLR 1 426 0 784 258 98 4 chr5 105353180 105353405 -94276745 - MIR SINE MIR -15 247 2 324 0 0 0 chr5 105354019 105354055 -94276095 + (CA)n Simple_repeat Simple_repeat 2 37 0 652 239 44 34 chr5 105354574 105354779 -94275371 - MER63A DNA MER1_type -3 207 1 367 373 54 11 chr5 105355145 105355405 -94274745 - Charlie8 DNA MER1_type -2145 272 2 749 185 8 0 chr5 105356016 105356146 -94274004 - FLAM_C SINE Alu -8 135 5 21 0 0 0 chr5 105356193 105356214 -94273936 + AT_rich Low_complexity Low_complexity 1 21 0 239 310 84 43 chr5 105356835 105356968 -94273182 + MIR3 SINE MIR 32 169 -39 35 41 0 0 chr5 105357007 105357056 -94273094 + AT_rich Low_complexity Low_complexity 1 49 0 267 267 0 0 chr5 105357326 105357386 -94272764 + (TATATG)n Simple_repeat Simple_repeat 4 63 0 2005 111 99 31 chr5 105358380 105358733 -94271417 + MER51B LTR ERV1 1 377 0 189 0 0 0 chr5 105359459 105359480 -94270670 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 39 38 0 0 chr5 105362392 105362445 -94267705 + AT_rich Low_complexity Low_complexity 1 53 0 23 0 0 0 chr5 105362806 105362829 -94267321 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 105364961 105364984 -94265166 + AT_rich Low_complexity Low_complexity 1 23 0 333 223 40 29 chr5 105365349 105365524 -94264626 + (TA)n Simple_repeat Simple_repeat 2 178 0 22 0 0 0 chr5 105365577 105365599 -94264551 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 105365782 105365804 -94264346 + AT_rich Low_complexity Low_complexity 1 22 0 348 235 25 8 chr5 105365858 105365977 -94264173 + (TA)n Simple_repeat Simple_repeat 1 121 0 1863 122 3 49 chr5 105366523 105366850 -94263300 + AluSx SINE Alu 1 312 0 510 122 0 0 chr5 105367071 105367145 -94263005 + MADE1 DNA Mariner 1 74 -6 21 71 0 0 chr5 105367164 105367206 -94262944 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr5 105367451 105367481 -94262669 + AT_rich Low_complexity Low_complexity 1 30 0 188 182 23 0 chr5 105367801 105367845 -94262305 + (TA)n Simple_repeat Simple_repeat 2 46 0 2208 111 0 7 chr5 105367975 105368281 -94261869 - AluSx SINE Alu -8 304 1 27 49 0 0 chr5 105368296 105368337 -94261813 + AT_rich Low_complexity Low_complexity 1 41 0 26 30 0 0 chr5 105368389 105368422 -94261728 + AT_rich Low_complexity Low_complexity 1 33 0 361 332 100 5 chr5 105368422 105368635 -94261515 + L1MC4a LINE L1 5707 5944 -220 26 0 0 0 chr5 105368939 105368965 -94261185 + AT_rich Low_complexity Low_complexity 1 26 0 2066 135 0 3 chr5 105369132 105369443 -94260707 - AluSx SINE Alu -2 310 1 2276 81 0 0 chr5 105371295 105371616 -94258534 + AluY SINE Alu 1 321 0 21 36 0 0 chr5 105374228 105374256 -94255894 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 105374374 105374403 -94255747 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr5 105376690 105376723 -94253427 + AT_rich Low_complexity Low_complexity 1 33 0 185 304 71 0 chr5 105376869 105376925 -94253225 - L2 LINE L2 -3 3310 3251 292 294 39 0 chr5 105377588 105377690 -94252460 - MIR SINE MIR -93 169 64 195 42 0 0 chr5 105378174 105378198 -94251952 + (CA)n Simple_repeat Simple_repeat 2 25 0 28 48 0 0 chr5 105378569 105378611 -94251539 + AT_rich Low_complexity Low_complexity 1 42 0 1755 129 3 14 chr5 105379380 105379695 -94250455 - AluSx SINE Alu 0 312 1 581 285 102 11 chr5 105379703 105379889 -94250261 - MIR SINE MIR -14 248 46 205 125 50 0 chr5 105380305 105380345 -94249805 + GA-rich Low_complexity Low_complexity 3 44 0 23 0 0 0 chr5 105380507 105380530 -94249620 + AT_rich Low_complexity Low_complexity 1 23 0 2449 71 0 3 chr5 105381286 105381597 -94248553 + AluY SINE Alu 1 310 -1 229 296 114 11 chr5 105381633 105381721 -94248429 + L2 LINE L2 3161 3257 -15 21 36 0 0 chr5 105381835 105381863 -94248287 + AT_rich Low_complexity Low_complexity 1 28 0 306 0 0 0 chr5 105383572 105383606 -94246544 + (CA)n Simple_repeat Simple_repeat 1 34 0 656 258 16 38 chr5 105383636 105383822 -94246328 - MIR SINE MIR -59 203 22 203 294 44 88 chr5 105385695 105385855 -94244295 + L2 LINE L2 2933 3085 -187 3572 47 2 0 chr5 105386842 105387286 -94242864 - L1PA5 LINE L1 -1 6153 5709 259 303 11 11 chr5 105387398 105387487 -94242663 - L1ME LINE L1 -515 5606 5518 1243 163 58 33 chr5 105389201 105389438 -94240712 - L1MA6 LINE L1 0 6300 6054 1996 144 60 8 chr5 105389438 105389791 -94240359 + THE1C LTR MaLR 1 371 -4 1243 163 58 33 chr5 105389791 105389829 -94240321 - L1MA6 LINE L1 -246 6054 6018 180 0 0 0 chr5 105389869 105389889 -94240261 + (A)n Simple_repeat Simple_repeat 1 20 0 413 272 184 0 chr5 105389943 105390090 -94240060 - MER5A DNA MER1_type -7 182 9 284 219 18 35 chr5 105391490 105391566 -94238584 + CT-rich Low_complexity Low_complexity 2 77 -36 1653 177 3 39 chr5 105391566 105391877 -94238273 - AluJb SINE Alu -12 300 1 284 219 18 35 chr5 105391877 105391914 -94238236 + CT-rich Low_complexity Low_complexity 77 113 0 2096 113 10 0 chr5 105395181 105395472 -94234678 - AluSp SINE Alu -19 294 1 230 157 0 20 chr5 105397063 105397114 -94233036 + CT-rich Low_complexity Low_complexity 4 53 0 358 308 105 47 chr5 105397156 105397500 -94232650 - L2 LINE L2 -12 3301 2938 686 315 69 0 chr5 105397600 105397816 -94232334 - L2 LINE L2 -622 2692 2462 2199 128 11 3 chr5 105398641 105398993 -94231157 + THE1A LTR MaLR 1 355 0 11157 101 9 6 chr5 105398993 105400568 -94229582 + THE1A-int LTR MaLR 1 1580 0 2293 125 14 3 chr5 105400568 105400919 -94229231 + THE1A LTR MaLR 1 355 0 25 65 0 0 chr5 105402425 105402471 -94227679 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr5 105403053 105403074 -94227076 + AT_rich Low_complexity Low_complexity 1 21 0 334 273 0 30 chr5 105404243 105404342 -94225808 + MLT1J LTR MaLR 1 96 -415 180 0 0 0 chr5 105407000 105407020 -94223130 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 267 259 0 0 chr5 105408787 105408841 -94221309 + MIR SINE MIR 38 91 -117 1824 86 12 0 chr5 105409750 105410006 -94220144 + L1PA8 LINE L1 5911 6169 -3 280 302 123 22 chr5 105411118 105411297 -94218853 - Charlie8 DNA MER1_type -2136 281 85 3063 188 44 6 chr5 105413053 105413714 -94216436 + L1MA7 LINE L1 5600 6285 -6 573 159 0 0 chr5 105415204 105415292 -94214858 + FLAM_A SINE Alu 34 121 -21 23 0 0 0 chr5 105416193 105416216 -94213934 + AT_rich Low_complexity Low_complexity 1 23 0 185 0 40 0 chr5 105417755 105417780 -94212370 + (TGGGGG)n Simple_repeat Simple_repeat 2 27 0 278 113 0 38 chr5 105420429 105420482 -94209668 + (CATA)n Simple_repeat Simple_repeat 4 54 0 223 137 20 20 chr5 105421082 105421133 -94209017 + GA-rich Low_complexity Low_complexity 3 53 0 218 313 47 118 chr5 105422112 105422563 -94207587 - L2 LINE L2 -5 3267 2849 267 122 0 0 chr5 105422728 105422777 -94207373 + (A)n Simple_repeat Simple_repeat 1 49 0 4902 198 33 39 chr5 105423567 105425273 -94204877 - L1MC1 LINE L1 -1 6332 4642 2848 23 0 17 chr5 105425273 105425624 -94204526 - L1PA4 LINE L1 -3 6152 5808 4902 198 33 39 chr5 105425624 105425923 -94204227 - L1MC1 LINE L1 -1691 4642 4343 1881 187 20 28 chr5 105425985 105426380 -94203770 - MLT2D LTR ERVL -14 400 9 2287 78 0 0 chr5 105428911 105429231 -94200919 - AluY SINE Alu 0 320 1 697 289 113 30 chr5 105429544 105429907 -94200243 - L2 LINE L2 0 3313 2921 636 337 149 36 chr5 105430085 105430856 -94199294 - L2 LINE L2 -2083 1231 374 32 43 0 0 chr5 105430970 105431016 -94199134 + AT_rich Low_complexity Low_complexity 1 46 0 370 294 74 74 chr5 105431149 105431448 -94198702 - MLT1I LTR MaLR -32 377 79 1897 108 0 79 chr5 105432359 105432664 -94197486 + AluSc SINE Alu 16 296 -13 10934 57 3 2 chr5 105432991 105435181 -94194969 - L1PA5 LINE L1 0 6154 3981 372 42 0 0 chr5 105435181 105435229 -94194921 - L1PA5 LINE L1 -2430 3716 3669 910 259 98 42 chr5 105435257 105435759 -94194391 - L1ME2 LINE L1 -17 6147 5618 273 29 0 0 chr5 105435766 105435800 -94194350 + (TG)n Simple_repeat Simple_repeat 2 35 0 488 227 21 19 chr5 105435802 105436042 -94194108 - L1ME2 LINE L1 -615 5549 5255 296 171 43 29 chr5 105436050 105436120 -94194030 + MADE1 DNA Mariner 10 80 0 2090 274 45 25 chr5 105436122 105436304 -94193846 - L1ME2 LINE L1 -895 5251 5074 279 0 0 0 chr5 105436304 105436335 -94193815 + (TG)n Simple_repeat Simple_repeat 2 32 0 2090 274 45 25 chr5 105436335 105437117 -94193033 - L1ME2 LINE L1 -1072 5074 4268 13542 188 22 27 chr5 105437124 105439304 -94190846 - L1P5 LINE L1 -370 6497 4308 221 0 35 0 chr5 105439304 105439333 -94190817 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 13542 188 22 27 chr5 105439333 105442375 -94187775 - L1P5 LINE L1 -2559 4308 1101 1681 197 39 28 chr5 105442532 105442893 -94187257 + MLT1A1 LTR MaLR 1 365 0 983 319 31 17 chr5 105443346 105443700 -94186450 - LTR16A LTR ERVL -19 431 73 365 340 32 27 chr5 105444095 105444280 -94185870 - HERV16 LTR ERVL -2005 3480 3295 383 318 16 0 chr5 105444537 105444666 -94185484 - HERV16 LTR ERVL -3207 1789 1659 476 407 26 3 chr5 105444698 105445003 -94185147 - HERV16 LTR ERVL -3447 1549 1238 1198 153 25 0 chr5 105445343 105445539 -94184611 + MER2 DNA MER2_type 1 201 -144 319 270 68 0 chr5 105445575 105445649 -94184501 + MER2 DNA MER2_type 267 345 0 993 309 54 51 chr5 105445855 105446483 -94183667 - HERV16 LTR ERVL -4329 667 38 607 360 37 4 chr5 105446526 105446768 -94183382 - LTR16A LTR ERVL -11 439 190 40367 73 4 2 chr5 105447081 105453227 -94176923 - L1PA5 LINE L1 0 6154 2 4588 181 23 37 chr5 105454653 105455656 -94174494 - L1MA9 LINE L1 0 6312 5324 2518 194 35 28 chr5 105455659 105456235 -94173915 + L1MA9 LINE L1 4726 5305 -841 31 26 0 0 chr5 105456325 105456363 -94173787 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr5 105456401 105456430 -94173720 + AT_rich Low_complexity Low_complexity 1 29 0 796 247 69 86 chr5 105456891 105457302 -94172848 + MLT2C2 LTR ERVL 66 464 0 22 56 0 0 chr5 105457758 105457794 -94172356 + AT_rich Low_complexity Low_complexity 1 36 0 249 324 65 43 chr5 105458306 105458491 -94171659 + L1MEc LINE L1 289 477 -5919 253 294 24 12 chr5 105458733 105458818 -94171332 + MER58 DNA MER1_type 169 254 -2166 227 242 0 76 chr5 105458832 105458898 -94171252 + MER58 DNA MER1_type 2359 2419 -1 526 272 89 50 chr5 105458915 105459477 -94170673 + L1MEc LINE L1 692 1275 -5121 1947 104 62 24 chr5 105459491 105459779 -94170371 - AluSx SINE Alu -13 299 1 32 26 0 0 chr5 105459918 105459957 -94170193 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 105460070 105460092 -94170058 + AT_rich Low_complexity Low_complexity 1 22 0 347 261 23 34 chr5 105460356 105460442 -94169708 + (CATATA)n Simple_repeat Simple_repeat 2 87 -88 1808 165 54 12 chr5 105460442 105460775 -94169375 - MER7A DNA MER2_type -1 345 1 347 261 23 34 chr5 105460775 105460864 -94169286 + (CATATA)n Simple_repeat Simple_repeat 87 175 0 1688 126 112 7 chr5 105461830 105462108 -94168042 - AluSg SINE Alu -3 307 1 2072 108 7 7 chr5 105462356 105462652 -94167498 - AluSq SINE Alu 0 313 18 38 22 0 0 chr5 105462909 105462954 -94167196 + AT_rich Low_complexity Low_complexity 1 45 0 2074 129 0 0 chr5 105462954 105463234 -94166916 - AluSg SINE Alu -24 286 7 245 202 61 10 chr5 105463519 105463618 -94166532 + (TA)n Simple_repeat Simple_repeat 2 105 0 229 133 50 0 chr5 105463625 105463685 -94166465 + CT-rich Low_complexity Low_complexity 2 64 0 351 306 75 29 chr5 105464169 105464342 -94165808 - MLT1H LTR MaLR -366 183 3 889 204 69 56 chr5 105465147 105465466 -94164684 - MER33 DNA MER1_type 0 324 2 188 410 19 29 chr5 105465512 105465617 -94164533 + L2 LINE L2 3156 3259 -13 22 0 0 0 chr5 105466827 105466849 -94163301 + AT_rich Low_complexity Low_complexity 1 22 0 517 334 52 29 chr5 105467992 105468336 -94161814 + LTR16A LTR ERVL 85 436 -14 207 0 0 0 chr5 105468475 105468498 -94161652 + (T)n Simple_repeat Simple_repeat 1 23 0 954 103 0 0 chr5 105468865 105468991 -94161159 + AluSg/x SINE Alu 169 294 -18 315 0 0 0 chr5 105469002 105469037 -94161113 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1431 251 63 0 chr5 105469625 105470019 -94160131 - L1ME1 LINE L1 -165 6001 5583 778 257 17 0 chr5 105470023 105470198 -94159952 - MSTD LTR MaLR 0 396 219 286 232 14 0 chr5 105470198 105470267 -94159883 - L1M2 LINE L1 -669 5643 5574 2029 202 26 5 chr5 105470267 105470649 -94159501 - MSTB LTR MaLR 0 426 37 230 102 0 102 chr5 105470677 105470726 -94159424 - L1M2 LINE L1 -2745 5297 5254 1604 220 93 12 chr5 105470754 105471172 -94158978 + L1MA8 LINE L1 2008 2459 -5106 560 125 67 58 chr5 105471165 105471178 -94158972 + L1MA5A LINE L1 5793 5804 -493 * 1643 194 0 3 chr5 105471178 105471462 -94158688 + AluJb SINE Alu 1 283 -29 560 125 67 58 chr5 105471462 105471568 -94158582 + L1MA5A LINE L1 5804 5913 -384 1543 138 64 51 chr5 105471568 105471879 -94158271 + THE1B LTR MaLR 1 315 -49 935 211 39 4 chr5 105471880 105472136 -94158014 + L1MA8 LINE L1 2419 2683 -4882 * 1766 223 15 93 chr5 105472133 105472865 -94157285 - L1M1 LINE L1 -4205 3360 2686 1001 231 43 5 chr5 105472866 105473074 -94157076 + L1M1 LINE L1 302 517 -7048 1147 95 28 22 chr5 105473074 105473253 -94156897 + MER30 DNA MER1_type 1 180 -50 10862 184 31 28 chr5 105473271 105474980 -94155170 + L1M1 LINE L1 510 2228 -5337 2123 126 0 0 chr5 105474980 105475274 -94154876 + AluSx SINE Alu 8 301 -11 10862 184 31 28 chr5 105475274 105475656 -94154494 + L1M1 LINE L1 2228 2607 -4958 6049 194 21 14 chr5 105475651 105477531 -94152619 + L1M1 LINE L1 3150 5049 -2516 * 3752 102 15 20 chr5 105477532 105478131 -94152019 + L1MA1 LINE L1 5701 6296 -6 4416 181 65 1 chr5 105478142 105479080 -94151070 + L1MA8 LINE L1 4668 5665 -1900 2706 208 11 0 chr5 105479081 105479654 -94150496 - L1 LINE L1 -2298 3848 3270 * 5265 185 36 24 chr5 105479649 105481555 -94148595 + L1MA8 LINE L1 5665 7596 -114 450 0 0 0 chr5 105481555 105481605 -94148545 + (TTATA)n Simple_repeat Simple_repeat 1 50 0 5265 185 36 24 chr5 105481605 105481717 -94148433 + L1MA8 LINE L1 7596 7705 -5 24 32 0 0 chr5 105481721 105481752 -94148398 + AT_rich Low_complexity Low_complexity 1 31 0 580 349 101 33 chr5 105481900 105482815 -94147335 + L2 LINE L2 1614 2590 -724 203 333 149 0 chr5 105483138 105483279 -94146871 + L2 LINE L2 2915 3076 -196 236 321 109 95 chr5 105483401 105483817 -94146333 - LTR33 LTR ERVL -95 428 39 251 337 71 0 chr5 105483866 105483964 -94146186 + L2 LINE L2 3168 3272 0 202 268 28 0 chr5 105483981 105484052 -94146098 + (TA)n Simple_repeat Simple_repeat 1 73 0 231 270 0 16 chr5 105484489 105484552 -94145598 - MIR3 SINE MIR -1 207 146 242 264 0 0 chr5 105484707 105484760 -94145390 + CT-rich Low_complexity Low_complexity 5 57 0 192 40 0 0 chr5 105485300 105485325 -94144825 + (TGG)n Simple_repeat Simple_repeat 1 25 0 413 66 16 0 chr5 105487297 105487358 -94142792 + (TG)n Simple_repeat Simple_repeat 2 63 0 462 260 28 72 chr5 105488191 105488372 -94141778 + MLT1D LTR MaLR 24 196 -309 10784 173 23 51 chr5 105488379 105490718 -94139432 + L1M1 LINE L1 1676 3846 -3719 3256 113 2 0 chr5 105490718 105491170 -94138980 + MLT2A2 LTR ERVL 1 453 0 10784 173 23 51 chr5 105491170 105492911 -94137239 + L1M1 LINE L1 3846 5634 -1931 215 175 18 0 chr5 105493048 105493105 -94137045 + (TG)n Simple_repeat Simple_repeat 1 58 0 468 264 31 6 chr5 105493608 105493771 -94136379 - L1MD3 LINE L1 -11 7984 7818 1554 264 98 43 chr5 105494162 105494230 -94135920 - L1MEc LINE L1 -2724 3658 3595 1977 111 14 3 chr5 105494230 105494518 -94135632 + AluSq SINE Alu 9 299 -14 1554 264 98 43 chr5 105494518 105494616 -94135534 - L1MEc LINE L1 -2787 3595 3504 7224 41 16 0 chr5 105494616 105495618 -94134532 - L1PA4 LINE L1 -2 6153 5147 1554 264 98 43 chr5 105495618 105496098 -94134052 - L1MEc LINE L1 -2878 3504 3052 2426 70 0 0 chr5 105496098 105496399 -94133751 - AluY SINE Alu -10 301 1 1554 264 98 43 chr5 105496399 105496988 -94133162 - L1MEc LINE L1 -3330 3052 2497 1334 185 45 51 chr5 105496988 105497301 -94132849 - AluJb SINE Alu 0 312 2 1554 264 98 43 chr5 105497301 105497887 -94132263 - L1MEc LINE L1 -3885 2497 1800 312 261 25 50 chr5 105498044 105498205 -94131945 - L1MEc LINE L1 -4944 1440 1284 * 703 312 108 23 chr5 105498202 105498458 -94131692 - L1MEc LINE L1 -5931 632 399 216 67 0 0 chr5 105498458 105498488 -94131662 + (CA)n Simple_repeat Simple_repeat 2 31 0 703 312 108 23 chr5 105498488 105498596 -94131554 - L1MEc LINE L1 -6164 399 231 3230 183 40 62 chr5 105498596 105499398 -94130752 + LTR1 LTR ERV1 1 784 -1 703 312 108 23 chr5 105499398 105499420 -94130730 - L1MEc LINE L1 -6332 231 212 367 232 72 55 chr5 105499424 105499605 -94130545 - L1MEc LINE L1 -4167 2229 2046 3603 98 35 13 chr5 105499610 105500041 -94130109 - MER41A LTR ERV1 -1 553 106 6409 104 25 29 chr5 105500041 105501014 -94129136 - LTR5 LTR ERVK 0 969 1 3603 98 35 13 chr5 105501014 105501123 -94129027 - MER41A LTR ERV1 -448 106 1 2621 93 58 21 chr5 105501285 105501717 -94128433 - LTR7 LTR ERV1 -2 448 1 2498 84 45 13 chr5 105501717 105502097 -94128053 - HERVH LTR ERV1 0 7713 7322 1297 122 23 14 chr5 105502095 105502316 -94127834 - HERVH LTR ERV1 -1894 5819 5597 * 2986 129 0 21 chr5 105502313 105502943 -94127207 - HERVH LTR ERV1 -2564 5149 4488 1396 92 0 0 chr5 105502945 105503140 -94127010 - HERVH LTR ERV1 -3720 3993 3799 2401 75 6 0 chr5 105503292 105503610 -94126540 - HERVH LTR ERV1 -7393 320 1 2617 93 58 21 chr5 105503612 105504044 -94126106 - LTR7 LTR ERV1 -2 448 1 614 322 91 45 chr5 105504045 105504639 -94125511 - L1MEc LINE L1 -4598 1798 1232 2256 88 3 0 chr5 105504639 105504935 -94125215 - AluY SINE Alu -14 297 1 614 322 91 45 chr5 105504935 105506008 -94124142 - L1MEc LINE L1 -5164 1232 55 2206 188 69 43 chr5 105506280 105506832 -94123318 - LTR1B LTR ERV1 0 826 261 1968 97 0 48 chr5 105506992 105507310 -94122840 + AluSx SINE Alu 11 314 0 6343 201 40 54 chr5 105508263 105510043 -94120107 + L1MC3 LINE L1 4985 5288 -858 2290 131 28 17 chr5 105510043 105510403 -94119747 + THE1B LTR MaLR 1 364 0 6343 201 40 54 chr5 105510403 105510518 -94119632 + L1MC3 LINE L1 5288 5403 -743 1768 194 27 5 chr5 105510526 105510927 -94119223 + L1MC3 LINE L1 7355 7764 -21 1520 163 68 7 chr5 105513732 105514027 -94116123 - AluSq SINE Alu 0 313 1 1583 211 7 60 chr5 105515488 105515906 -94114244 + L1MC2 LINE L1 5821 6216 -128 23 68 0 0 chr5 105516232 105516276 -94113874 + AT_rich Low_complexity Low_complexity 1 44 0 439 184 64 18 chr5 105516362 105516471 -94113679 + FRAM SINE Alu 1 40 0 376 159 0 14 chr5 105516471 105516540 -94113610 - LTR33A LTR ERVL -28 495 428 8916 205 40 81 chr5 105516554 105521649 -94108501 + L1M1 LINE L1 15 5591 -1974 789 103 8 0 chr5 105521649 105521766 -94108384 - MSTA LTR MaLR -310 118 1 180 0 0 0 chr5 105521786 105521806 -94108344 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1995 273 32 19 chr5 105521822 105522654 -94107496 + L1MD1 LINE L1 3190 4032 -2114 2570 208 77 30 chr5 105522656 105523345 -94106805 + L1MD1 LINE L1 5235 5959 -283 1184 196 26 107 chr5 105523357 105523776 -94106374 - LTR5 LTR ERVK -14 955 571 7499 27 4 1 chr5 105523776 105525431 -94104719 + L1PA4 LINE L1 4489 6155 0 2676 179 28 9 chr5 105525436 105525978 -94104172 - LTR5 LTR ERVK -417 552 1 1123 209 25 0 chr5 105525981 105526259 -94103891 + L1MD1 LINE L1 5958 6242 0 1663 246 132 35 chr5 105526623 105527221 -94102929 + MLT2F LTR ERVL 8 663 0 2395 172 71 23 chr5 105527235 105527753 -94102397 - MER67A LTR ERV1 0 543 1 207 264 38 0 chr5 105529260 105529313 -94100837 - L2 LINE L2 -84 3229 3175 241 288 82 0 chr5 105529575 105529648 -94100502 - MER5A DNA MER1_type -80 109 31 28 71 0 0 chr5 105529687 105529743 -94100407 + AT_rich Low_complexity Low_complexity 1 56 0 7831 118 43 22 chr5 105529813 105531418 -94098732 - HERVH LTR ERV1 -5967 1746 354 27 29 0 0 chr5 105531626 105531660 -94098490 + AT_rich Low_complexity Low_complexity 1 34 0 279 342 25 0 chr5 105532914 105532993 -94097157 + MIR SINE MIR 5 85 -177 4684 191 26 14 chr5 105533481 105533549 -94096601 - L1MA8 LINE L1 -2 6289 6223 1520 196 77 12 chr5 105533549 105533876 -94096274 - MER7A DNA MER2_type 0 346 1 4684 191 26 14 chr5 105533876 105535582 -94094568 - L1MA8 LINE L1 -68 6223 4501 33 25 0 0 chr5 105537470 105537510 -94092640 + AT_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr5 105538538 105538563 -94091587 + AT_rich Low_complexity Low_complexity 1 25 0 250 348 43 22 chr5 105538749 105538887 -94091263 + MIR SINE MIR 64 204 -58 14483 29 0 0 chr5 105539255 105541753 -94088397 + L1PA3 LINE L1 3659 6155 0 1394 179 58 69 chr5 105543562 105543941 -94086209 - THE1C LTR MaLR 0 375 1 7445 141 33 7 chr5 105543941 105545265 -94084885 - THE1C-int LTR MaLR 0 1645 182 1449 235 132 51 chr5 105545266 105545933 -94084217 + MER50 LTR ERV1 14 734 0 1080 124 16 16 chr5 105545938 105546124 -94084026 - THE1C-int LTR MaLR -1394 186 1 1541 166 63 74 chr5 105546124 105546503 -94083647 - THE1C LTR MaLR 0 375 1 891 148 43 19 chr5 105546583 105546745 -94083405 + THE1C LTR MaLR 1 166 -209 4664 237 76 23 chr5 105546747 105548122 -94082028 + L1P LINE L1 1667 3113 -3033 771 238 146 0 chr5 105548308 105548493 -94081657 - MLT1F1 LTR MaLR -351 216 5 739 272 51 78 chr5 105548521 105549033 -94081117 - L1MC5 LINE L1 -852 7109 6636 285 145 0 65 chr5 105549217 105549279 -94080871 + MADE1 DNA Mariner 23 80 0 2212 107 0 3 chr5 105549918 105550217 -94079933 - AluSg SINE Alu -12 298 1 1664 146 25 97 chr5 105550409 105550578 -94079572 - MSTB1 LTR MaLR -13 419 288 6910 64 2 2 chr5 105550578 105551532 -94078618 + L1PA7 LINE L1 5193 6146 -8 1664 146 25 97 chr5 105551532 105551724 -94078426 - MSTB1 LTR MaLR -144 288 84 426 314 73 25 chr5 105551732 105552006 -94078144 - L1MC5 LINE L1 -2226 5582 5296 21 36 0 0 chr5 105552134 105552162 -94077988 + AT_rich Low_complexity Low_complexity 1 28 0 365 287 83 82 chr5 105552335 105552934 -94077216 - L1MC5 LINE L1 -1299 4847 4248 272 376 6 0 chr5 105552953 105553110 -94077040 - L1P LINE L1 -1941 4205 4048 1839 43 47 20 chr5 105553138 105553393 -94076757 + AluY SINE Alu 1 262 -49 22 0 0 0 chr5 105553479 105553501 -94076649 + AT_rich Low_complexity Low_complexity 1 22 0 429 36 0 0 chr5 105554860 105554915 -94075235 + (TG)n Simple_repeat Simple_repeat 2 56 0 341 303 87 41 chr5 105555129 105555324 -94074826 + MIR SINE MIR 30 233 -29 22 56 0 0 chr5 105556465 105556501 -94073649 + AT_rich Low_complexity Low_complexity 1 36 0 545 179 0 110 chr5 105558533 105558730 -94071420 + MER51A LTR ERV1 453 637 -3 294 164 98 0 chr5 105558734 105558795 -94071355 + MER51A-int LTR ERV1 2 68 -7748 359 227 0 13 chr5 105559026 105559101 -94071049 + MER51A-int LTR ERV1 708 781 -7035 277 316 0 0 chr5 105559501 105559596 -94070554 + HUERS-P3 LTR ERV1 2106 2200 -6719 307 278 38 81 chr5 105559796 105560116 -94070034 + HUERS-P3 LTR ERV1 2082 2387 -5369 520 322 67 33 chr5 105560866 105561250 -94068900 + HUERS-P3 LTR ERV1 2900 3152 -3502 200 328 0 30 chr5 105561857 105561924 -94068226 + MER5A DNA MER1_type 104 168 -21 416 315 22 17 chr5 105562530 105562708 -94067442 - LTR16A1 LTR ERVL -4 453 275 416 258 24 16 chr5 105562753 105562877 -94067273 - LTR16A1 LTR ERVL -332 125 1 2243 205 60 21 chr5 105563004 105563584 -94066566 - L1MA10 LINE L1 -360 5952 5350 1443 203 51 17 chr5 105563581 105563771 -94066379 + L1MA10 LINE L1 5967 6149 -185 * 189 0 0 0 chr5 105563771 105563792 -94066358 + (CA)n Simple_repeat Simple_repeat 2 22 0 1443 203 51 17 chr5 105563792 105563955 -94066195 + L1MA10 LINE L1 6149 6332 -2 204 182 0 45 chr5 105563975 105564019 -94066131 + GA-rich Low_complexity Low_complexity 2 43 0 2693 7 0 0 chr5 105564702 105564997 -94065153 + AluYa5 SINE Alu 17 311 0 999 275 13 9 chr5 105565432 105565665 -94064485 + Tigger5 DNA MER2_type 6 239 -2084 * 1174 154 47 17 chr5 105565655 105565889 -94064261 + Tigger5 DNA MER2_type 2083 2323 0 1160 281 64 11 chr5 105566290 105566760 -94063390 - L1M4 LINE L1 -2012 4134 3640 25463 30 1 0 chr5 105566778 105570640 -94059510 - L1PA4 LINE L1 -3 6152 2289 39650 37 1 2 chr5 105570763 105576174 -94053976 - L1PA4 LINE L1 -230 5925 519 2582 185 38 6 chr5 105576407 105577229 -94052921 - L1M1 LINE L1 -505 7219 6364 * 4601 198 39 28 chr5 105577226 105578287 -94051863 - L1M1 LINE L1 -4570 2995 1924 250 105 0 0 chr5 105578640 105578678 -94051472 + L1MA1 LINE L1 6177 6214 -88 207 175 0 0 chr5 105578775 105578832 -94051318 + (TA)n Simple_repeat Simple_repeat 2 58 0 21 0 0 0 chr5 105580116 105580137 -94050013 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 105580370 105580392 -94049758 + AT_rich Low_complexity Low_complexity 1 22 0 191 0 103 0 chr5 105581543 105581572 -94048578 + (CATAA)n Simple_repeat Simple_repeat 2 33 0 203 200 0 33 chr5 105582735 105582795 -94047355 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 490 176 17 17 chr5 105582892 105583011 -94047139 + (CATATA)n Simple_repeat Simple_repeat 2 120 0 21 0 0 0 chr5 105583454 105583475 -94046675 + AT_rich Low_complexity Low_complexity 1 21 0 1391 0 0 0 chr5 105583475 105583630 -94046520 - L1PA5 LINE L1 -11 6143 5989 21 0 0 0 chr5 105585368 105585389 -94044761 + AT_rich Low_complexity Low_complexity 1 21 0 1996 243 75 77 chr5 105585527 105585662 -94044488 + L1MD3 LINE L1 6360 6494 -1501 1988 147 50 17 chr5 105585662 105586023 -94044127 - THE1C LTR MaLR 0 375 3 1996 243 75 77 chr5 105586023 105586784 -94043366 + L1MD3 LINE L1 6494 7254 -741 405 281 25 0 chr5 105586793 105586914 -94043236 + MLT1F1 LTR MaLR 1 124 -443 759 269 42 4 chr5 105586914 105587152 -94042998 + L1MD3 LINE L1 7404 7650 -345 642 255 69 27 chr5 105587901 105588089 -94042061 - MER3 DNA MER1_type -4 205 10 1815 225 39 86 chr5 105588394 105588940 -94041210 + MLT2B1 LTR ERVL 1 520 0 1071 245 77 25 chr5 105588940 105589495 -94040655 + ERVL-B1-B1 LTR ERVL 1 631 -5133 918 170 0 26 chr5 105589507 105589660 -94040490 - FRAM SINE Alu -19 157 9 733 298 31 9 chr5 105589671 105589896 -94040254 + ERVL-B1-B1 LTR ERVL 649 878 -4886 * 6851 189 22 26 chr5 105589893 105591218 -94038932 + ERVL-B1-B1 LTR ERVL 1526 2845 -2919 7509 191 24 6 chr5 105591325 105592700 -94037450 + ERVL-B1-B1 LTR ERVL 3044 4443 -1321 1073 146 0 0 chr5 105592700 105592851 -94037299 + AluSq SINE Alu 139 289 -24 1149 173 7 88 chr5 105592853 105593136 -94037014 + ERVL-B1-B1 LTR ERVL 5499 5758 -6 2241 194 82 25 chr5 105593137 105593578 -94036572 + MLT2B1 LTR ERVL 3 476 -44 423 0 0 0 chr5 105593578 105593625 -94036525 + (CA)n Simple_repeat Simple_repeat 2 48 0 2241 194 82 25 chr5 105593625 105593673 -94036477 + MLT2B1 LTR ERVL 476 520 0 27 49 0 0 chr5 105594132 105594173 -94035977 + AT_rich Low_complexity Low_complexity 1 41 0 919 195 0 96 chr5 105594306 105594643 -94035507 - MLT1C LTR MaLR 0 467 2 1681 69 0 5 chr5 105594650 105594867 -94035283 - AluY SINE Alu -17 294 79 207 0 0 0 chr5 105595502 105595525 -94034625 + (CA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr5 105595844 105595866 -94034284 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 105596158 105596179 -94033971 + AT_rich Low_complexity Low_complexity 1 21 0 267 173 0 0 chr5 105596437 105596489 -94033661 + CT-rich Low_complexity Low_complexity 4 55 0 21 0 0 0 chr5 105596937 105596958 -94033192 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr5 105598607 105598639 -94031511 + AT_rich Low_complexity Low_complexity 1 32 0 201 250 0 0 chr5 105599854 105599914 -94030236 + T-rich Low_complexity Low_complexity 6 65 0 232 202 20 91 chr5 105599962 105600061 -94030089 - L1MC4 LINE L1 -1336 6706 6615 275 310 7 7 chr5 105600781 105600926 -94029224 + (TATATG)n Simple_repeat Simple_repeat 2 146 0 1695 171 64 3 chr5 105600945 105601291 -94028859 - L1PB4 LINE L1 -1 6155 5789 180 217 0 0 chr5 105601300 105601346 -94028804 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 274 140 40 0 chr5 105601360 105601410 -94028740 + L1M2 LINE L1 5782 5833 -458 239 318 47 0 chr5 105601478 105601563 -94028587 - L1MC4 LINE L1 -1340 6702 6614 241 313 24 0 chr5 105601568 105601651 -94028499 - L1MC4 LINE L1 -1344 6698 6614 241 279 63 0 chr5 105601684 105601763 -94028387 - L1MC4 LINE L1 -1344 6698 6615 403 447 0 0 chr5 105601766 105601927 -94028223 + (CGTG)n Simple_repeat Simple_repeat 1 161 0 195 184 0 0 chr5 105601927 105601965 -94028185 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 328 270 0 22 chr5 105601969 105602058 -94028092 - L1MC4 LINE L1 -1342 6700 6614 2068 159 3 9 chr5 105602064 105602398 -94027752 - THE1B LTR MaLR -32 332 1 278 177 53 106 chr5 105602399 105602512 -94027638 - L1MC4 LINE L1 -1322 6720 6614 264 304 0 0 chr5 105602504 105602596 -94027554 + L1MC4 LINE L1 6614 6705 -1337 * 280 272 0 22 chr5 105602566 105602658 -94027492 - L1MC4 LINE L1 -1339 6703 6614 477 122 0 0 chr5 105602661 105602735 -94027415 + L1MC1 LINE L1 6254 6327 -6 243 0 0 0 chr5 105602820 105602847 -94027303 + (TG)n Simple_repeat Simple_repeat 2 28 0 201 39 0 0 chr5 105604897 105604923 -94025227 + (A)n Simple_repeat Simple_repeat 1 26 0 381 289 16 25 chr5 105605133 105605254 -94024896 - MLT1G3 LTR MaLR -231 299 180 2011 109 10 32 chr5 105605254 105605566 -94024584 + AluSx SINE Alu 1 305 -7 1885 110 42 0 chr5 105605713 105605977 -94024173 + AluSx SINE Alu 1 275 -37 233 29 29 0 chr5 105605995 105606029 -94024121 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 229 305 67 81 chr5 105606104 105606314 -94023836 - MLT1-int LTR MaLR -24 1347 1141 373 317 96 12 chr5 105606677 105606844 -94023306 - MLT1-int LTR MaLR -499 872 692 333 296 10 0 chr5 105607186 105607284 -94022866 - MLT1-int LTR MaLR -850 521 423 409 301 44 0 chr5 105607546 105607682 -94022468 - MLT1G3 LTR MaLR 0 595 454 704 334 58 3 chr5 105607703 105608046 -94022104 - MLT1G3 LTR MaLR -194 336 1 23 0 0 0 chr5 105608327 105608350 -94021800 + AT_rich Low_complexity Low_complexity 1 23 0 557 261 116 5 chr5 105608524 105608739 -94021411 + L1ME2 LINE L1 4731 4969 -1177 275 183 17 0 chr5 105608807 105608867 -94021283 - L1MA2 LINE L1 -197 6107 6047 1130 81 0 6 chr5 105608867 105609027 -94021123 + L1MA2 LINE L1 6144 6302 -2 2485 49 0 0 chr5 105609167 105609474 -94020676 + AluY SINE Alu 1 307 -4 24 77 0 0 chr5 105609489 105609541 -94020609 + AT_rich Low_complexity Low_complexity 1 52 0 1585 254 40 69 chr5 105609564 105610494 -94019656 + L1ME2 LINE L1 5239 6144 -20 1452 221 13 8 chr5 105610504 105610879 -94019271 - L1MB5 LINE L1 -9 6165 5789 1585 221 25 19 chr5 105610880 105611247 -94018903 + MLT2D LTR ERVL 1 369 -45 471 101 0 0 chr5 105611249 105611328 -94018822 + (TCTA)n Simple_repeat Simple_repeat 2 80 0 243 215 0 0 chr5 105611330 105611395 -94018755 + (TA)n Simple_repeat Simple_repeat 2 66 0 1179 201 82 16 chr5 105611415 105611719 -94018431 - L1MB5 LINE L1 -715 5618 5295 882 113 53 7 chr5 105611731 105611881 -94018269 - L1MA1 LINE L1 -1 6301 6145 548 149 97 0 chr5 105611881 105611995 -94018155 + L1MA1 LINE L1 5958 6082 -220 * 1650 241 79 104 chr5 105611989 105612938 -94017212 - L1MB5 LINE L1 -838 5308 4384 5201 138 7 45 chr5 105612945 105614024 -94016126 + L1PB3 LINE L1 5117 6154 0 1547 204 16 13 chr5 105614024 105614402 -94015748 - L1MCa LINE L1 -3998 2566 2188 289 217 0 0 chr5 105614436 105614496 -94015654 - L1 LINE L1 -1565 4581 4522 24 0 0 0 chr5 105614517 105614541 -94015609 + AT_rich Low_complexity Low_complexity 1 24 0 685 226 16 73 chr5 105614541 105614789 -94015361 + L1MCa LINE L1 1062 1295 -5131 * 1759 213 108 51 chr5 105614785 105616700 -94013450 - L1MCa LINE L1 -4395 2169 1 233 226 0 19 chr5 105618714 105618767 -94011383 + L2 LINE L2 3262 3313 0 1643 109 0 0 chr5 105619863 105620092 -94010058 - AluSx SINE Alu -83 229 1 637 63 21 0 chr5 105620237 105620332 -94009818 + (TA)n Simple_repeat Simple_repeat 1 97 0 22 0 0 0 chr5 105621237 105621259 -94008891 + AT_rich Low_complexity Low_complexity 1 22 0 950 269 54 54 chr5 105621935 105622325 -94007825 - MLT1B LTR MaLR 0 390 1 1573 292 22 22 chr5 105622325 105622825 -94007325 - MLT1B-int LTR MaLR 0 1735 1236 20333 28 0 0 chr5 105622991 105626204 -94003946 - L1PA2 LINE L1 -2 6153 2941 926 206 40 0 chr5 105626353 105626576 -94003574 + L1MA7 LINE L1 6045 6276 -15 605 297 78 10 chr5 105626602 105626895 -94003255 + L1M4 LINE L1 3497 3809 -2337 407 309 79 44 chr5 105626967 105627219 -94002931 + L1M4 LINE L1 2 262 -6280 262 171 13 13 chr5 105627395 105627471 -94002679 + (TA)n Simple_repeat Simple_repeat 2 77 0 206 128 26 0 chr5 105627499 105627538 -94002612 + (TG)n Simple_repeat Simple_repeat 2 41 0 2350 231 18 28 chr5 105627640 105628349 -94001801 + L1M4 LINE L1 1438 2139 -4507 1864 258 42 60 chr5 105628367 105629314 -94000836 + L1M4 LINE L1 3387 4316 -2328 312 256 85 23 chr5 105629416 105629592 -94000558 - L1M4 LINE L1 -1603 4543 4357 2103 108 4 0 chr5 105629712 105630036 -94000114 - AluSq SINE Alu 0 313 17 511 331 96 21 chr5 105630079 105630454 -93999696 - L1M4 LINE L1 -2044 4102 3700 28 48 0 0 chr5 105630718 105630760 -93999390 + AT_rich Low_complexity Low_complexity 1 42 0 562 255 65 44 chr5 105630779 105631076 -93999074 - L1ME2 LINE L1 -44 6120 5816 571 268 154 13 chr5 105631078 105631805 -93998345 - L1ME2 LINE L1 -546 5618 4909 609 144 58 10 chr5 105631915 105632019 -93998131 - MER2 DNA MER2_type -236 109 1 574 215 155 62 chr5 105632806 105633142 -93997008 + L1ME LINE L1 5272 5631 -531 545 320 10 35 chr5 105633153 105633353 -93996797 - MER63A DNA MER1_type -7 203 9 583 226 49 12 chr5 105633363 105633527 -93996623 + L1ME LINE L1 5623 5792 -374 351 166 36 22 chr5 105633578 105633717 -93996433 + (CATATA)n Simple_repeat Simple_repeat 2 142 0 370 258 21 0 chr5 105633717 105633810 -93996340 - L1MC4 LINE L1 -1341 6701 6607 842 282 93 35 chr5 105634016 105635071 -93995079 - L1ME3A LINE L1 -271 5899 4781 295 359 32 19 chr5 105635419 105635575 -93994575 + MIR SINE MIR 57 214 -48 222 136 0 23 chr5 105635748 105635792 -93994358 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 5038 35 2 0 chr5 105635800 105636419 -93993731 - L1PA4 LINE L1 -865 5281 4662 * 5725 30 36 0 chr5 105636417 105637116 -93993034 + L1PA4 LINE L1 5279 6002 -153 21 0 0 0 chr5 105637239 105637260 -93992890 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr5 105637378 105637426 -93992724 + AT_rich Low_complexity Low_complexity 1 48 0 274 146 0 0 chr5 105637956 105637997 -93992153 - AluY SINE Alu -56 245 205 214 356 14 0 chr5 105639223 105639296 -93990854 - L2 LINE L2 -39 3274 3201 21 0 0 0 chr5 105641336 105641357 -93988793 + AT_rich Low_complexity Low_complexity 1 21 0 1927 130 32 49 chr5 105642078 105642448 -93987702 + THE1B LTR MaLR 1 364 0 11258 99 8 1 chr5 105642450 105644017 -93986133 + THE1B-int LTR MaLR 3 1580 0 1315 154 15 121 chr5 105644017 105644301 -93985849 + THE1A LTR MaLR 1 233 -122 1599 104 13 9 chr5 105644301 105644532 -93985618 + AluSg/x SINE Alu 79 310 0 1315 154 15 121 chr5 105644532 105644644 -93985506 + THE1A LTR MaLR 233 355 0 524 238 108 108 chr5 105645562 105645673 -93984477 + L1MC3 LINE L1 5332 5442 -800 1774 164 67 25 chr5 105645673 105646033 -93984117 + THE1C LTR MaLR 1 375 0 8811 149 8 48 chr5 105646036 105647678 -93982472 + THE1C-int LTR MaLR 4 1580 0 1619 149 77 44 chr5 105647678 105648041 -93982109 + THE1C LTR MaLR 1 375 0 524 238 108 108 chr5 105648041 105648758 -93981392 + L1MC3 LINE L1 5442 6079 -163 23 0 0 0 chr5 105648808 105648831 -93981319 + AT_rich Low_complexity Low_complexity 1 23 0 873 305 17 51 chr5 105648919 105649270 -93980880 + L1M3 LINE L1 421 759 -5544 1063 154 0 0 chr5 105649385 105649554 -93980596 + AluSq SINE Alu 145 313 0 273 196 18 0 chr5 105649557 105649613 -93980537 + L1M4 LINE L1 3037 3093 -3053 * 37669 91 8 7 chr5 105649607 105655758 -93974392 + L1PA6 LINE L1 2 6154 0 713 239 29 55 chr5 105655753 105656096 -93974054 + L1M4 LINE L1 3073 3406 -2740 * 220 379 11 0 chr5 105656099 105656186 -93973964 + MIR SINE MIR 64 151 -57 4895 186 7 3 chr5 105656489 105657439 -93972711 - L1P LINE L1 -1178 4968 4015 2689 234 6 8 chr5 105657435 105658096 -93972054 + L1P LINE L1 2228 2887 -3259 * 4011 270 91 37 chr5 105658634 105658721 -93971429 + L1M3 LINE L1 811 892 -5490 181 57 57 0 chr5 105658721 105658756 -93971394 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4011 270 91 37 chr5 105658756 105659941 -93970209 + L1M3 LINE L1 892 2011 -4371 1666 182 63 122 chr5 105659941 105660530 -93969620 + MLT2B3 LTR ERVL 1 554 0 4011 270 91 37 chr5 105660530 105661115 -93969035 + L1M3 LINE L1 2011 2563 -3819 237 33 0 0 chr5 105661115 105661145 -93969005 + (TG)n Simple_repeat Simple_repeat 2 31 0 4011 270 91 37 chr5 105661145 105662942 -93967208 + L1M3 LINE L1 2563 4600 -1782 1066 170 5 18 chr5 105662937 105663155 -93966995 + L1M3 LINE L1 5589 5803 -767 * 292 200 158 21 chr5 105663545 105663640 -93966510 - L1ME3 LINE L1 -1 6161 6054 331 237 49 41 chr5 105663659 105663849 -93966301 - L1P5 LINE L1 -700 5451 5254 1537 229 3 3 chr5 105664292 105664597 -93965553 - MLT1A1 LTR MaLR 0 365 61 296 392 90 14 chr5 105664634 105664978 -93965172 - L3 LINE CR1 -119 1458 1089 217 339 76 8 chr5 105665303 105665421 -93964729 - L3 LINE CR1 -201 1376 1251 24 0 0 0 chr5 105665579 105665603 -93964547 + AT_rich Low_complexity Low_complexity 1 24 0 28 29 0 0 chr5 105666188 105666223 -93963927 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 105667468 105667499 -93962651 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr5 105668029 105668070 -93962080 + AT_rich Low_complexity Low_complexity 1 41 0 957 185 6 0 chr5 105668071 105668228 -93961922 - FRAM SINE Alu -8 158 1 27 49 0 0 chr5 105668489 105668530 -93961620 + AT_rich Low_complexity Low_complexity 1 41 0 1339 199 168 5 chr5 105669071 105669465 -93960685 - MLT2B1 LTR ERVL 0 515 3 209 238 0 0 chr5 105669646 105669688 -93960462 + T-rich Low_complexity Low_complexity 1 42 0 2193 118 0 10 chr5 105670104 105670410 -93959740 + AluSq SINE Alu 1 303 -10 1096 248 35 55 chr5 105670411 105670810 -93959340 - L1ME3A LINE L1 -20 6150 5760 631 144 0 8 chr5 105670809 105670927 -93959223 + L1PA10 LINE L1 5928 6044 -124 * 233 0 62 0 chr5 105671185 105671217 -93958933 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 217 87 87 0 chr5 105671332 105671378 -93958772 + T-rich Low_complexity Low_complexity 1 50 0 1822 208 29 3 chr5 105672139 105672519 -93957631 + MLT1B LTR MaLR 1 390 0 5662 145 9 4 chr5 105672862 105673961 -93956189 - L1PB2 LINE L1 -1 6150 5048 6702 229 27 25 chr5 105674062 105676354 -93953796 - L1 LINE L1 -2337 3809 1508 3803 178 11 27 chr5 105676510 105677445 -93952705 - L1PB4 LINE L1 -153 6003 5081 1788 115 0 0 chr5 105677541 105677785 -93952365 - AluSx SINE Alu -68 244 1 1787 158 49 25 chr5 105678734 105679100 -93951050 + THE1C LTR MaLR 1 375 0 859 220 19 14 chr5 105680537 105680746 -93949404 - MER67C LTR ERV1 -2 708 499 1118 222 90 21 chr5 105680753 105681087 -93949063 - MER67C LTR ERV1 -330 380 24 2472 221 60 11 chr5 105681362 105682058 -93948092 + Charlie5 DNA MER1_type 1367 2096 -516 348 24 0 0 chr5 105682289 105682330 -93947820 + (CA)n Simple_repeat Simple_repeat 2 42 0 351 260 123 84 chr5 105683773 105683805 -93946345 - MER5B DNA MER1_type -15 163 134 1281 206 57 7 chr5 105683805 105684086 -93946064 - AluJo SINE Alu -4 298 4 351 260 123 84 chr5 105684086 105684207 -93945943 - MER5B DNA MER1_type -44 134 4 668 250 191 72 chr5 105685062 105685301 -93944849 - L1ME2 LINE L1 0 6164 5955 2068 100 27 20 chr5 105685301 105685601 -93944549 - AluSx SINE Alu -10 302 1 668 250 191 72 chr5 105685601 105685817 -93944333 - L1ME2 LINE L1 -209 5955 5766 234 0 0 0 chr5 105685817 105685843 -93944307 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 668 250 191 72 chr5 105685843 105686009 -93944141 - L1ME2 LINE L1 -398 5766 5468 22 80 0 0 chr5 105686248 105686298 -93943852 + AT_rich Low_complexity Low_complexity 1 50 0 353 325 31 35 chr5 105686893 105687182 -93942968 - L1ME2 LINE L1 -1124 5022 4735 534 330 73 42 chr5 105687202 105688154 -93941996 - L1ME2 LINE L1 -1495 4651 3670 3338 198 100 48 chr5 105688180 105689585 -93940565 + L1MA6 LINE L1 4812 6294 -6 475 168 109 0 chr5 105689595 105689696 -93940454 + L1MA9 LINE L1 6163 6274 -38 23 0 0 0 chr5 105689718 105689741 -93940409 + AT_rich Low_complexity Low_complexity 1 23 0 2004 129 29 58 chr5 105690617 105690996 -93939154 - THE1C LTR MaLR -7 368 1 1914 158 72 28 chr5 105691024 105691455 -93938695 - LTR7 LTR ERV1 0 450 1 21 57 0 0 chr5 105692003 105692038 -93938112 + AT_rich Low_complexity Low_complexity 1 35 0 2059 114 7 10 chr5 105692464 105692770 -93937380 - AluSc SINE Alu -4 305 1 189 0 0 0 chr5 105694337 105694358 -93935792 + (A)n Simple_repeat Simple_repeat 1 21 0 * 393 147 32 0 chr5 105694357 105694452 -93935698 + (TA)n Simple_repeat Simple_repeat 2 99 0 323 194 56 28 chr5 105695346 105695454 -93934696 - L1M4 LINE L1 -1484 4662 4552 2579 161 2 0 chr5 105696153 105696594 -93933556 - L1PA13 LINE L1 -1 6162 5721 1353 139 0 5 chr5 105696594 105696810 -93933340 - L1PA13 LINE L1 -298 5865 5651 5730 185 23 8 chr5 105696912 105698035 -93932115 - L1PBb LINE L1 -5058 1146 7 2602 239 2 18 chr5 105698005 105698607 -93931543 - L1PBa LINE L1 -5223 981 390 * 13535 174 28 1 chr5 105698607 105701521 -93928629 - L1PA11 LINE L1 0 7612 4570 459 52 0 0 chr5 105701521 105701579 -93928571 + (TG)n Simple_repeat Simple_repeat 2 59 0 13535 174 28 1 chr5 105701579 105702006 -93928144 - L1PA11 LINE L1 -3042 4570 4156 6825 60 0 1 chr5 105702031 105703725 -93926425 - L1PA7 LINE L1 0 6154 4451 6711 239 9 17 chr5 105703725 105705497 -93924653 - L1PA11 LINE L1 -3423 4161 2404 204 40 0 0 chr5 105705499 105705524 -93924626 + (TTG)n Simple_repeat Simple_repeat 3 27 0 3638 229 34 30 chr5 105705524 105706429 -93923721 - L1PA11 LINE L1 -6671 910 2 3163 264 46 22 chr5 105706432 105707468 -93922682 - L1PBa LINE L1 -5800 1063 3 9205 253 9 16 chr5 105707806 105709857 -93920293 + L1M2 LINE L1 2 1973 -4680 5203 209 26 42 chr5 105709985 105711335 -93918815 + L1M2 LINE L1 4596 5924 -808 1084 230 22 17 chr5 105711339 105711569 -93918581 + AluJb SINE Alu 11 241 -71 481 163 12 0 chr5 105711571 105711657 -93918493 + L1M2 LINE L1 5961 6047 -830 237 67 0 0 chr5 105711855 105711885 -93918265 + LTR6A LTR ERV1 73 102 -462 341 277 14 0 chr5 105712041 105712141 -93918009 + L1MC/D LINE L1 611 906 -5740 212 196 20 0 chr5 105712219 105712270 -93917880 + T-rich Low_complexity Low_complexity 3 54 0 859 223 39 59 chr5 105712279 105712584 -93917566 + L1MC/D LINE L1 817 1115 -5427 584 246 0 8 chr5 105712602 105712736 -93917414 + MLT1A1 LTR MaLR 1 133 -232 189 121 0 0 chr5 105712768 105712801 -93917349 + (TC)n Simple_repeat Simple_repeat 2 34 0 277 246 0 14 chr5 105712862 105712931 -93917219 + MLT1A1 LTR MaLR 186 253 -112 * 671 231 14 0 chr5 105712926 105713073 -93917077 + MLT1A1 LTR MaLR 215 363 -2 359 268 69 21 chr5 105713075 105713277 -93916873 + L1MC/D LINE L1 1150 1353 -5193 4962 204 8 8 chr5 105713377 105714431 -93915719 + L1P LINE L1 2965 4018 -2128 2045 138 0 3 chr5 105714682 105714979 -93915171 - AluSx SINE Alu -11 301 6 203 308 132 57 chr5 105716033 105716260 -93913890 - MIR SINE MIR -12 250 7 1824 159 128 13 chr5 105717422 105717806 -93912344 + MSTA LTR MaLR 1 428 0 8332 192 33 9 chr5 105717806 105719409 -93910741 + MSTA-int LTR MaLR 1 1579 -1 2360 152 54 5 chr5 105719410 105719818 -93910332 + MSTA LTR MaLR 1 428 0 27 73 0 0 chr5 105720003 105720058 -93910092 + AT_rich Low_complexity Low_complexity 1 55 0 1310 250 131 30 chr5 105721558 105722094 -93908056 - MER63C DNA MER1_type -178 752 163 42152 35 24 2 chr5 105722094 105728110 -93902040 + L1PA2 LINE L1 1 6150 -5 367 228 15 59 chr5 105728110 105728246 -93901904 - MER63C DNA MER1_type -754 176 47 617 296 69 37 chr5 105728312 105729122 -93901028 + L1MC/D LINE L1 2618 3453 -3191 636 326 76 25 chr5 105729504 105729900 -93900250 + L1PBa LINE L1 39 454 -6409 4447 250 51 44 chr5 105729964 105731784 -93898366 + L1 LINE L1 1865 3704 -2442 213 65 0 0 chr5 105731784 105731815 -93898335 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 4447 250 51 44 chr5 105731815 105731856 -93898294 + L1 LINE L1 3704 3743 -2403 2780 223 71 13 chr5 105731851 105732669 -93897481 + L1 LINE L1 4140 5004 -1142 * 1112 175 5 0 chr5 105732784 105732973 -93897177 + L1PB4 LINE L1 5961 6150 -6 304 291 51 79 chr5 105733031 105733285 -93896865 + L1MC/D LINE L1 3618 3864 -2780 31 26 0 0 chr5 105733434 105733472 -93896678 + AT_rich Low_complexity Low_complexity 1 38 0 38 22 0 0 chr5 105733545 105733590 -93896560 + AT_rich Low_complexity Low_complexity 1 45 0 868 295 107 45 chr5 105733639 105734844 -93895306 + L1MC/D LINE L1 4319 5598 -1046 204 217 50 0 chr5 105734962 105735022 -93895128 + (CATA)n Simple_repeat Simple_repeat 2 64 0 306 277 40 0 chr5 105735028 105735129 -93895021 + L1ME3A LINE L1 5587 5691 -479 271 288 141 47 chr5 105735277 105735596 -93894554 + L1ME3A LINE L1 5788 6136 -34 24 32 0 0 chr5 105737318 105737349 -93892801 + AT_rich Low_complexity Low_complexity 1 31 0 303 288 73 68 chr5 105737370 105737589 -93892561 + L1ME4a LINE L1 5716 5935 -186 24 0 0 0 chr5 105737706 105737730 -93892420 + AT_rich Low_complexity Low_complexity 1 24 0 36 62 0 0 chr5 105737882 105737946 -93892204 + AT_rich Low_complexity Low_complexity 1 64 0 22 70 0 0 chr5 105738184 105738227 -93891923 + AT_rich Low_complexity Low_complexity 1 43 0 304 329 62 33 chr5 105738293 105738630 -93891520 + L1MC/D LINE L1 5755 6101 -2205 25 31 0 0 chr5 105738632 105738664 -93891486 + AT_rich Low_complexity Low_complexity 1 32 0 3776 82 2 2 chr5 105738721 105739236 -93890914 - L1PA8 LINE L1 -6 6166 5652 4834 34 2 4 chr5 105739426 105740039 -93890111 - L1PA15-16 LINE L1 -3354 3495 2887 211 262 16 0 chr5 105740070 105740131 -93890019 + L2 LINE L2 2184 2245 -1069 2086 159 0 23 chr5 105740179 105740525 -93889625 + MER7A DNA MER2_type 2 337 -9 2037 201 114 11 chr5 105740921 105741481 -93888669 - MLT1A2-int LTR MaLR -636 735 1 734 290 58 71 chr5 105741481 105741765 -93888385 - MLT1A2 LTR MaLR 0 374 95 2012 123 17 10 chr5 105741765 105742057 -93888093 - AluSx SINE Alu -18 294 1 734 290 58 71 chr5 105742057 105742151 -93887999 - MLT1A2 LTR MaLR -279 95 1 409 337 90 64 chr5 105742570 105742970 -93887180 - L2 LINE L2 -591 2723 2300 2043 161 0 23 chr5 105742970 105743323 -93886827 - MER7A DNA MER2_type -2 344 2 409 337 90 64 chr5 105743323 105743545 -93886605 - L2 LINE L2 -1014 2300 2085 24 67 0 0 chr5 105743755 105743800 -93886350 + AT_rich Low_complexity Low_complexity 1 45 0 23 0 0 0 chr5 105744069 105744092 -93886058 + AT_rich Low_complexity Low_complexity 1 23 0 2248 139 34 0 chr5 105744181 105744533 -93885617 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr5 105744830 105744851 -93885299 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr5 105746694 105746749 -93883401 + AT_rich Low_complexity Low_complexity 1 55 0 366 195 26 0 chr5 105746888 105746965 -93883185 - MLT1H1 LTR MaLR -17 538 460 378 326 71 5 chr5 105747156 105747352 -93882798 - MLT1H LTR MaLR -338 211 3 983 242 24 60 chr5 105747760 105748088 -93882062 - L1MA7 LINE L1 -5 6286 5969 2035 139 22 33 chr5 105748088 105748456 -93881694 - THE1B LTR MaLR 0 364 1 10223 114 52 1 chr5 105748456 105749960 -93880190 - THE1B-int LTR MaLR 0 1580 1 2100 139 19 30 chr5 105749962 105750328 -93879822 - THE1B LTR MaLR -2 362 1 780 199 30 0 chr5 105750329 105750495 -93879655 - L1MA7 LINE L1 -317 5974 5804 184 244 128 35 chr5 105751258 105751344 -93878806 - MIR SINE MIR -56 152 59 314 286 36 18 chr5 105752232 105752344 -93877806 - L2 LINE L2 -1 3312 3199 319 328 124 27 chr5 105752391 105752577 -93877573 + MLT1K LTR MaLR 189 392 -196 26 0 0 0 chr5 105753007 105753033 -93877117 + AT_rich Low_complexity Low_complexity 1 26 0 525 161 76 0 chr5 105753226 105753344 -93876806 - L1MA9 LINE L1 -1 6311 6185 5629 22 0 0 chr5 105753731 105754666 -93875484 - L1P1 LINE L1 -498 5657 4723 24 32 0 0 chr5 105754673 105754704 -93875446 + AT_rich Low_complexity Low_complexity 1 31 0 35 63 0 0 chr5 105754817 105754880 -93875270 + AT_rich Low_complexity Low_complexity 1 63 0 2303 86 35 1 chr5 105755186 105755553 -93874597 - L1PA13 LINE L1 -558 5610 5228 3520 112 2 13 chr5 105755553 105756091 -93874059 + L1PA13 LINE L1 5629 6160 -3 2303 86 35 1 chr5 105756091 105756116 -93874034 - L1P4 LINE L1 -940 5228 5205 365 308 89 43 chr5 105757204 105757723 -93872427 + MLT1F LTR MaLR 22 583 -7 30 69 0 0 chr5 105757918 105757976 -93872174 + AT_rich Low_complexity Low_complexity 1 58 0 3123 186 29 5 chr5 105758788 105759451 -93870699 - L1PB4 LINE L1 -2 6154 5476 1216 161 5 23 chr5 105759452 105759623 -93870527 - AluSg/x SINE Alu -7 305 137 2190 114 3 0 chr5 105759623 105759922 -93870228 - AluSx SINE Alu -12 300 1 1216 161 5 23 chr5 105759922 105759967 -93870183 - AluSg/x SINE Alu -175 137 93 2789 218 8 11 chr5 105811533 105812149 -93818001 + L1MC3 LINE L1 7003 7616 -169 327 25 0 0 chr5 105812714 105812754 -93817396 + (CA)n Simple_repeat Simple_repeat 2 41 0 736 377 65 15 chr5 105813333 105814033 -93816117 + L2 LINE L2 2579 3312 -1 2290 176 27 35 chr5 105814470 105814953 -93815197 - Tigger1 DNA MER2_type 0 2418 1940 398 313 29 50 chr5 105814962 105815202 -93814948 + L2 LINE L2 2921 3155 -158 213 39 0 0 chr5 105815206 105815232 -93814918 + (TG)n Simple_repeat Simple_repeat 1 26 0 411 38 0 0 chr5 105815492 105815545 -93814605 + (TG)n Simple_repeat Simple_repeat 1 53 0 315 311 108 7 chr5 105815657 105815805 -93814345 + MIR SINE MIR 97 259 -3 367 316 123 18 chr5 105817111 105817339 -93812811 + MIR SINE MIR 9 260 -2 26 0 0 0 chr5 105817431 105817457 -93812693 + AT_rich Low_complexity Low_complexity 1 26 0 24 32 0 0 chr5 105817996 105818027 -93812123 + AT_rich Low_complexity Low_complexity 1 31 0 274 352 117 4 chr5 105818339 105818569 -93811581 + MIR SINE MIR 6 261 -1 9006 24 0 1 chr5 105819206 105821044 -93809106 + L1PA2 LINE L1 4311 6151 -4 21 0 0 0 chr5 105821675 105821696 -93808454 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 105821767 105821796 -93808354 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 105821851 105821875 -93808275 + AT_rich Low_complexity Low_complexity 1 24 0 430 229 17 34 chr5 105822345 105822463 -93807687 + L1MD3 LINE L1 7730 7845 -150 694 278 67 16 chr5 105822515 105822889 -93807261 + MER69 DNA AcHobo 2134 2526 0 435 348 71 9 chr5 105823625 105823835 -93806315 + MIR SINE MIR 10 232 -30 1626 263 78 16 chr5 105824895 105825561 -93804589 - L1MC4 LINE L1 -131 7911 7205 613 250 46 37 chr5 105825581 105825797 -93804353 - L1MA9 LINE L1 -63 6249 6032 562 164 29 0 chr5 105825807 105825911 -93804239 - L1MA9 LINE L1 -293 5896 5790 798 260 170 25 chr5 105825912 105826277 -93803873 - L1MC4 LINE L1 -890 7152 6735 198 128 0 0 chr5 105826313 105826352 -93803798 + (TA)n Simple_repeat Simple_repeat 2 40 0 361 246 0 57 chr5 105826365 105826700 -93803450 + (CATATA)n Simple_repeat Simple_repeat 1 315 0 369 177 0 59 chr5 105826701 105826974 -93803176 + (TA)n Simple_repeat Simple_repeat 1 256 0 215 256 0 26 chr5 105827092 105827170 -93802980 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 304 278 93 33 chr5 105827415 105827566 -93802584 + MIR SINE MIR 37 196 -66 24 0 0 0 chr5 105827566 105827590 -93802560 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 105828119 105828147 -93802003 + AT_rich Low_complexity Low_complexity 1 28 0 593 237 65 32 chr5 105828772 105828958 -93801192 - MLT1E2 LTR MaLR 0 626 435 24 53 0 0 chr5 105829419 105829457 -93800693 + AT_rich Low_complexity Low_complexity 1 38 0 395 296 0 0 chr5 105829929 105830064 -93800086 + (TA)n Simple_repeat Simple_repeat 2 136 0 267 93 0 19 chr5 105830065 105830119 -93800031 + LTR66 LTR ERVL 388 440 -170 237 288 0 0 chr5 105830120 105830186 -93799964 + (TATATG)n Simple_repeat Simple_repeat 6 71 0 500 200 23 0 chr5 105830187 105830362 -93799788 + (TA)n Simple_repeat Simple_repeat 1 179 0 2451 85 122 8 chr5 105831044 105831446 -93798704 + LTR7 LTR ERV1 1 448 -2 11417 125 52 63 chr5 105831448 105832548 -93797602 + HERVH LTR ERV1 216 1327 -6386 184 297 109 22 chr5 105832548 105832686 -93797464 + L2 LINE L2 2433 2582 -732 11417 125 52 63 chr5 105832686 105834133 -93796017 + HERVH LTR ERV1 1327 2987 -4726 644 145 138 53 chr5 105834105 105834257 -93795893 + HERVH LTR ERV1 3126 3290 -4423 * 3374 107 4 6 chr5 105834247 105834750 -93795400 + HERVH LTR ERV1 3492 3993 -3720 4176 143 18 1 chr5 105834752 105835403 -93794747 + HERVH LTR ERV1 4488 5149 -2564 1401 125 19 0 chr5 105835404 105835620 -93794530 + HERVH LTR ERV1 5600 5819 -1894 * 2155 106 57 14 chr5 105835618 105835987 -93794163 + HERVH LTR ERV1 7322 7706 -7 2652 85 98 5 chr5 105835993 105836403 -93793747 + LTR7 LTR ERV1 1 448 -2 22 0 0 0 chr5 105837613 105837635 -93792515 + AT_rich Low_complexity Low_complexity 1 22 0 398 308 53 45 chr5 105838085 105838332 -93791818 - MIR SINE MIR -13 249 1 2368 84 3 3 chr5 105838771 105839079 -93791071 + AluSx SINE Alu 1 308 -4 6171 225 97 40 chr5 105839549 105840145 -93790005 - L1MC3 LINE L1 -20 7765 7204 5228 159 10 18 chr5 105840145 105841055 -93789095 + MER4D LTR ERV1 1 903 0 6171 225 97 40 chr5 105841055 105841178 -93788972 - L1MC3 LINE L1 -581 7204 7089 306 87 0 0 chr5 105841178 105841224 -93788926 + (TG)n Simple_repeat Simple_repeat 2 47 0 6171 225 97 40 chr5 105841224 105841999 -93788151 - L1MC3 LINE L1 -696 7089 6359 192 77 0 0 chr5 105841999 105842025 -93788125 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6171 225 97 40 chr5 105842025 105842657 -93787493 - L1MC3 LINE L1 -1426 6359 5516 1460 214 24 66 chr5 105842681 105843031 -93787119 + L1MD1 LINE L1 5787 6114 -128 1843 118 10 26 chr5 105843031 105843336 -93786814 + L1PB4 LINE L1 5850 6149 -7 1460 214 24 66 chr5 105843336 105843453 -93786697 + L1MD1 LINE L1 6114 6234 -8 27 0 0 0 chr5 105844658 105844685 -93785465 + AT_rich Low_complexity Low_complexity 1 27 0 28 0 0 0 chr5 105844893 105844921 -93785229 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 105845224 105845246 -93784904 + AT_rich Low_complexity Low_complexity 1 22 0 465 312 64 16 chr5 105845663 105845913 -93784237 - MLT1C LTR MaLR 0 467 206 255 250 60 0 chr5 105845917 105846001 -93784149 - L1ME3 LINE L1 -129 6033 5945 2913 267 34 7 chr5 105846241 105846971 -93783179 + L1PA15 LINE L1 6 755 -6032 * 3834 230 19 1 chr5 105846963 105847798 -93782352 + L1PA15 LINE L1 1232 2081 -4706 * 8530 200 21 15 chr5 105847796 105850596 -93779554 + L1PA15 LINE L1 4006 6815 -1 1031 225 73 45 chr5 105850856 105851211 -93778939 - MLT1A1 LTR MaLR 0 365 1 25 0 0 0 chr5 105851399 105851424 -93778726 + AT_rich Low_complexity Low_complexity 1 25 0 513 332 47 9 chr5 105851976 105852190 -93777960 + MIR SINE MIR 30 251 -11 484 239 55 49 chr5 105853082 105853245 -93776905 - MIR SINE MIR -4 258 95 221 169 17 0 chr5 105854018 105854077 -93776073 + (TA)n Simple_repeat Simple_repeat 2 61 0 2171 151 52 27 chr5 105854412 105854817 -93775333 - MSTA LTR MaLR -12 416 2 2214 250 48 55 chr5 105855399 105856992 -93773158 + L1MCb LINE L1 37 1715 -4851 691 224 52 37 chr5 105857028 105857296 -93772854 + L1MCb LINE L1 3195 3466 -3098 582 217 69 6 chr5 105857341 105857442 -93772708 - L1M3d LINE L1 -4658 1233 1115 207 0 0 0 chr5 105857442 105857465 -93772685 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 582 217 69 6 chr5 105857465 105857538 -93772612 - L1M3d LINE L1 -4776 1115 1048 342 263 151 14 chr5 105857554 105857839 -93772311 + L1MCb LINE L1 3488 3811 -2753 * 3053 215 44 49 chr5 105857832 105859139 -93771011 + L1MB1 LINE L1 5042 6281 -10 529 134 118 0 chr5 105859163 105859290 -93770860 + L1MCa LINE L1 1867 2008 -4418 448 234 99 7 chr5 105859300 105859573 -93770577 + L1MCa LINE L1 2064 2402 -4024 868 233 98 73 chr5 105859574 105860025 -93770125 + MLT1C LTR MaLR 4 465 -2 3080 186 86 4 chr5 105860030 105860706 -93769444 + MLT1C-int LTR MaLR 3 733 -638 397 177 51 0 chr5 105860707 105860786 -93769364 + MLT1B LTR MaLR 308 390 0 513 238 8 0 chr5 105860800 105860922 -93769228 + L1MCa LINE L1 3883 4005 -2421 231 194 45 0 chr5 105861255 105861322 -93768828 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 649 317 15 0 chr5 105861831 105862033 -93768117 - MIR SINE MIR 0 262 58 267 157 0 0 chr5 105862083 105862134 -93768016 + (CTATG)n Simple_repeat Simple_repeat 4 54 0 1453 254 38 13 chr5 105862149 105862601 -93767549 + MLT1C LTR MaLR 1 463 -4 216 348 0 0 chr5 105862863 105862932 -93767218 - MIR SINE MIR -76 132 64 24 67 0 0 chr5 105863041 105863086 -93767064 + AT_rich Low_complexity Low_complexity 1 45 0 4071 207 47 11 chr5 105863977 105864808 -93765342 + MER21B LTR ERV1 1 861 -2 993 266 76 82 chr5 105865593 105866492 -93763658 + L1MC/D LINE L1 1077 2020 -4896 2204 124 8 11 chr5 105866629 105866985 -93763165 + THE1A LTR MaLR 1 355 0 10658 118 8 6 chr5 105866985 105868563 -93761587 + THE1A-int LTR MaLR 1 1580 0 2069 154 8 11 chr5 105868563 105868919 -93761231 + THE1A LTR MaLR 1 355 0 408 214 40 75 chr5 105868985 105869186 -93760964 + L1MC/D LINE L1 5305 5498 -1443 * 1274 261 56 14 chr5 105869174 105869694 -93760456 + L1MC4a LINE L1 6950 7491 -317 1824 147 53 44 chr5 105869694 105869901 -93760249 + THE1B LTR MaLR 1 214 -150 1913 204 19 55 chr5 105869901 105870376 -93759774 - LTR22A LTR ERVK 0 458 1 1824 147 53 44 chr5 105870376 105870529 -93759621 + THE1B LTR MaLR 214 364 0 10847 115 11 0 chr5 105870529 105872092 -93758058 + THE1B-int LTR MaLR 1 1580 0 1871 124 40 119 chr5 105872092 105872487 -93757663 + THE1B LTR MaLR 1 364 0 1092 223 48 16 chr5 105872489 105872803 -93757347 + L1MD3 LINE L1 7662 7985 -10 4249 165 24 12 chr5 105872881 105873682 -93756468 + L1PB4 LINE L1 5343 6152 -4 22 0 0 0 chr5 105873682 105873704 -93756446 + AT_rich Low_complexity Low_complexity 1 22 0 352 328 92 33 chr5 105874229 105874588 -93755562 + MLT1G1 LTR MaLR 28 396 -194 432 206 22 0 chr5 105874639 105874731 -93755419 + MLT1G1 LTR MaLR 500 593 -2 682 47 0 12 chr5 105875017 105875103 -93755047 - MER4E LTR ERV1 -28 738 654 557 321 55 32 chr5 105875450 105875924 -93754226 + L1MC/D LINE L1 5551 6035 -906 225 274 39 64 chr5 105875947 105876151 -93753999 + L1MC/D LINE L1 6088 6286 -2317 1718 231 157 5 chr5 105876161 105876771 -93753379 + LTR50 LTR ERVL 3 705 -90 35 0 0 0 chr5 105877518 105877553 -93752597 + AT_rich Low_complexity Low_complexity 1 35 0 227 257 14 0 chr5 105878088 105878158 -93751992 + L1MEc LINE L1 110 180 -6216 * 1236 290 45 10 chr5 105878156 105878770 -93751380 + L1MEc LINE L1 666 1258 -4957 1464 290 134 10 chr5 105878775 105879640 -93750510 + L1M4 LINE L1 4196 5167 -979 694 341 20 26 chr5 105879609 105879961 -93750189 + L1MC4a LINE L1 12 361 -6035 * 257 0 30 0 chr5 105879961 105879994 -93750156 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1099 296 45 22 chr5 105880021 105880559 -93749591 + L1MC4a LINE L1 473 1022 -5374 679 143 57 97 chr5 105881807 105881982 -93748168 + FRAM SINE Alu 8 175 -1 705 280 110 43 chr5 105881987 105882662 -93747488 + L1MC4a LINE L1 997 1716 -4680 424 259 94 20 chr5 105882779 105882980 -93747170 + L1MC4a LINE L1 1701 1916 -4480 229 210 32 0 chr5 105882978 105883040 -93747110 + L1MC4a LINE L1 4372 4435 -1780 * 1802 238 61 74 chr5 105883119 105884053 -93746097 + L1MC4a LINE L1 4457 5378 -837 346 335 26 7 chr5 105885636 105885791 -93744359 + L1MC4a LINE L1 5781 5938 -1939 206 307 27 13 chr5 105887077 105887152 -93742998 - MIR3 SINE MIR -1 207 132 1316 186 106 8 chr5 105887173 105887437 -93742713 + AluJb SINE Alu 1 290 -22 297 308 25 8 chr5 105889446 105889566 -93740584 - MER91B DNA MER1_type -29 161 40 195 114 0 0 chr5 105890021 105890056 -93740094 + (TG)n Simple_repeat Simple_repeat 1 35 0 464 213 0 0 chr5 105890467 105890561 -93739589 - FLAM_A SINE Alu -15 127 34 191 36 36 0 chr5 105890728 105890756 -93739394 + (TTG)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr5 105890821 105890842 -93739308 + AT_rich Low_complexity Low_complexity 1 21 0 2278 194 17 65 chr5 105891187 105891728 -93738422 - MLT2B2 LTR ERVL 0 515 1 524 227 97 0 chr5 105892143 105892297 -93737853 + ORSL DNA AcHobo 2 170 -105 266 371 9 0 chr5 105892544 105892649 -93737501 - MIR SINE MIR -108 154 49 21 0 0 0 chr5 105892978 105892999 -93737151 + AT_rich Low_complexity Low_complexity 1 21 0 3053 62 3 0 chr5 105893004 105893393 -93736757 - L1PA7 LINE L1 -122 6032 5643 208 244 0 0 chr5 105894573 105894618 -93735532 + (CATATA)n Simple_repeat Simple_repeat 1 45 0 24 53 0 0 chr5 105894723 105894761 -93735389 + AT_rich Low_complexity Low_complexity 1 38 0 267 79 0 0 chr5 105895574 105895612 -93734538 + (TG)n Simple_repeat Simple_repeat 1 38 0 2021 113 3 0 chr5 105896660 105896971 -93733179 + AluSq SINE Alu 1 312 0 236 326 12 23 chr5 105897408 105897494 -93732656 + MIR SINE MIR 31 115 -147 210 291 25 0 chr5 105897534 105897613 -93732537 + (TA)n Simple_repeat Simple_repeat 2 82 0 460 104 13 13 chr5 105897944 105898021 -93732129 + MADE1 DNA Mariner 1 77 -3 257 71 0 24 chr5 105898024 105898066 -93732084 - MADE1 DNA Mariner -39 41 1 221 95 0 24 chr5 105898664 105898706 -93731444 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 5588 19 0 0 chr5 105898710 105899347 -93730803 - L1PA3 LINE L1 0 6155 5519 5959 21 0 1 chr5 105899347 105900192 -93729958 + L1PA3 LINE L1 4693 5535 -620 5921 194 14 19 chr5 105900173 105901518 -93728632 - L1 LINE L1 -1349 4797 3460 * 1815 229 20 13 chr5 105901515 105902014 -93728136 + L1P LINE L1 4841 5341 -810 * 258 105 0 0 chr5 105902211 105902249 -93727901 + (T)n Simple_repeat Simple_repeat 1 38 0 1514 271 68 33 chr5 105902592 105903160 -93726990 + L1MC2 LINE L1 3577 4173 -1973 186 43 0 0 chr5 105903160 105903183 -93726967 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1514 271 68 33 chr5 105903183 105903272 -93726878 + L1MC2 LINE L1 4173 4257 -1889 1032 261 58 55 chr5 105903288 105903636 -93726514 + L1PB4 LINE L1 10 358 -6491 464 321 28 87 chr5 105904281 105904568 -93725582 + L1PB4 LINE L1 793 1062 -5787 10836 231 52 35 chr5 105904865 105905831 -93724319 + L1PB4 LINE L1 1115 2063 -4795 2060 85 48 27 chr5 105905831 105906126 -93724024 - AluY SINE Alu -8 303 3 10836 231 52 35 chr5 105906126 105907766 -93722384 + L1PB4 LINE L1 2063 3674 -3184 270 0 0 0 chr5 105907766 105907796 -93722354 + (TAA)n Simple_repeat Simple_repeat 1 30 0 10836 231 52 35 chr5 105907796 105908930 -93721220 + L1PB4 LINE L1 3674 4787 -2071 2044 142 0 0 chr5 105908930 105909226 -93720924 - AluSx SINE Alu -16 296 1 10836 231 52 35 chr5 105909226 105911003 -93719147 + L1PB4 LINE L1 4787 6843 -15 4170 230 55 27 chr5 105911073 105913031 -93717119 + L1MC2 LINE L1 4319 6334 -10 1947 120 3 40 chr5 105915562 105915888 -93714262 + AluSx SINE Alu 1 312 0 21 0 0 0 chr5 105917889 105917910 -93712240 + AT_rich Low_complexity Low_complexity 1 21 0 1161 266 66 44 chr5 105918746 105919200 -93710950 - MLT1C LTR MaLR 0 467 4 537 137 74 0 chr5 105919633 105919728 -93710422 + MSTD LTR MaLR 1 102 -294 282 106 0 0 chr5 105919760 105919807 -93710343 + (CA)n Simple_repeat Simple_repeat 2 48 0 343 345 51 15 chr5 105920932 105921129 -93709021 + L1ME LINE L1 5581 5784 -337 21 71 0 0 chr5 105921251 105921293 -93708857 + AT_rich Low_complexity Low_complexity 1 42 0 713 192 14 132 chr5 105922392 105922497 -93707653 + MER7A DNA MER2_type 1 66 -2972 2308 81 0 31 chr5 105922497 105922818 -93707332 - AluY SINE Alu 0 311 1 713 192 14 132 chr5 105922818 105922931 -93707219 + MER7A DNA MER2_type 66 191 -155 275 93 0 0 chr5 105922923 105922966 -93707184 - Tigger3(Golem) DNA MER2_type -201 2828 2786 * 474 132 0 0 chr5 105923015 105923083 -93707067 + Tigger3(Golem) DNA MER2_type 2853 2920 -109 788 265 47 71 chr5 105924061 105924567 -93705583 + MER34 LTR ERV1 3 496 -46 21 36 0 0 chr5 105925205 105925233 -93704917 + AT_rich Low_complexity Low_complexity 1 28 0 525 194 7 101 chr5 105925437 105925576 -93704574 + MER34B LTR ERV1 1 126 -439 180 152 0 0 chr5 105926271 105926304 -93703846 + (TATG)n Simple_repeat Simple_repeat 1 33 0 289 296 104 52 chr5 105927440 105927690 -93702460 + LTR33 LTR ERVL 116 378 -143 22 56 0 0 chr5 105928164 105928200 -93701950 + AT_rich Low_complexity Low_complexity 1 36 0 1317 202 35 47 chr5 105928986 105929374 -93700776 - MER67C LTR ERV1 0 514 146 207 139 0 0 chr5 105929374 105929410 -93700740 + (A)n Simple_repeat Simple_repeat 1 36 0 461 213 118 0 chr5 105929417 105929553 -93700597 - MER67D LTR ERV1 -357 157 6 252 264 35 11 chr5 105930058 105930145 -93700005 - MLT1J LTR MaLR -45 466 378 22 35 0 0 chr5 105930829 105930858 -93699292 + AT_rich Low_complexity Low_complexity 1 29 0 234 284 30 0 chr5 105931081 105931148 -93699002 - MIR SINE MIR -119 143 75 38 22 0 0 chr5 105931277 105931322 -93698828 + AT_rich Low_complexity Low_complexity 1 45 0 201 176 0 0 chr5 105932298 105932332 -93697818 + (TA)n Simple_repeat Simple_repeat 1 34 0 7013 47 6 0 chr5 105932547 105933465 -93696685 - L1PA5 LINE L1 0 6154 5222 1202 149 9 9 chr5 105933466 105933681 -93696469 + L1PB1 LINE L1 5923 6137 -14 1456 164 62 27 chr5 105934004 105934327 -93695823 + AluSx SINE Alu 1 312 0 257 262 24 71 chr5 105935140 105935266 -93694884 + L2 LINE L2 3148 3267 -46 26 30 0 0 chr5 105935372 105935405 -93694745 + AT_rich Low_complexity Low_complexity 1 33 0 7031 206 30 5 chr5 105935414 105938018 -93692132 - L1PA16 LINE L1 -10 6156 3496 684 227 7 7 chr5 105938401 105938542 -93691608 + MLT2F LTR ERVL 1 141 -522 597 235 30 70 chr5 105938551 105938751 -93691399 + MLT1E3 LTR MaLR 51 242 -382 241 182 23 0 chr5 105938838 105938882 -93691268 + MLT2F LTR ERVL 479 523 -140 232 184 0 118 chr5 105938925 105939001 -93691149 + MLT2C2 LTR ERVL 343 409 -55 729 54 18 18 chr5 105939001 105939113 -93691037 + (TAGA)n Simple_repeat Simple_repeat 2 113 0 3442 95 4 0 chr5 105939116 105939590 -93690560 - THE1B-int LTR MaLR -1103 477 2 2077 143 48 31 chr5 105939591 105939949 -93690201 - THE1B LTR MaLR 0 364 1 28 29 0 0 chr5 105940109 105940144 -93690006 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 105940438 105940459 -93689691 + AT_rich Low_complexity Low_complexity 1 21 0 319 297 24 72 chr5 105940896 105941145 -93689005 + L1MC4a LINE L1 5645 5881 -1927 206 308 77 0 chr5 105943877 105943981 -93686169 + L2 LINE L2 3200 3311 -2 267 327 51 19 chr5 105944837 105944993 -93685157 + L1M3de LINE L1 1806 1966 -4687 1102 282 28 14 chr5 105945115 105945540 -93684610 + L1ME3 LINE L1 5653 6083 -79 927 163 184 84 chr5 105946259 105946591 -93683559 - MLT1A1 LTR MaLR 0 365 1 610 24 24 0 chr5 105947749 105947833 -93682317 + (TCTA)n Simple_repeat Simple_repeat 3 88 0 21 0 0 0 chr5 105948464 105948485 -93681665 + AT_rich Low_complexity Low_complexity 1 21 0 226 224 24 0 chr5 105948628 105948713 -93681437 + (TA)n Simple_repeat Simple_repeat 2 88 0 180 291 0 18 chr5 105948713 105948768 -93681382 - MIR SINE MIR -70 138 85 341 251 25 115 chr5 105948774 105949009 -93681141 - L2 LINE L2 0 3313 3100 1497 235 68 19 chr5 105949016 105949502 -93680648 + L1ME3A LINE L1 4378 4887 -1259 450 0 0 0 chr5 105949506 105949556 -93680594 + (TA)n Simple_repeat Simple_repeat 2 51 0 679 253 21 11 chr5 105949692 105949952 -93680198 + L1ME3A LINE L1 5663 5925 -241 32 43 0 0 chr5 105949992 105950038 -93680112 + AT_rich Low_complexity Low_complexity 1 46 0 2795 229 87 4 chr5 105950047 105950751 -93679399 - L1MA5 LINE L1 -30 6270 5509 3110 104 7 0 chr5 105950753 105951184 -93678966 + MER57B LTR ERV1 1 434 0 3988 159 17 6 chr5 105951184 105951833 -93678317 + MER57B-int LTR ERV1 1 656 -6881 6415 128 44 11 chr5 105951854 105952263 -93677887 + MER57B-int LTR ERV1 932 1326 -4620 195 42 0 0 chr5 105952263 105952287 -93677863 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6415 128 44 11 chr5 105952287 105953023 -93677127 + MER57B-int LTR ERV1 1326 2037 -3909 189 0 0 0 chr5 105953023 105953044 -93677106 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 6415 128 44 11 chr5 105953044 105953732 -93676418 + MER57B-int LTR ERV1 2037 2930 -3016 300 296 0 17 chr5 105953735 105953850 -93676300 + L1ME3A LINE L1 6058 6170 0 2346 112 67 33 chr5 105953862 105954343 -93675807 + PABL_A-int LTR ERV1 1833 2590 -2425 959 139 0 0 chr5 105954348 105954492 -93675658 + MER57B LTR ERV1 291 434 0 885 157 41 12 chr5 105954492 105954664 -93675486 - L1MA5 LINE L1 -781 5510 5334 506 224 112 18 chr5 105954660 105954830 -93675320 + L1ME1 LINE L1 5976 6161 -5 * 578 354 138 16 chr5 105955122 105955616 -93674534 - L2 LINE L2 -410 2904 2351 545 237 44 7 chr5 105956516 105956651 -93673499 - MER58B DNA MER1_type -15 326 187 3761 174 27 7 chr5 105956661 105957619 -93672531 - L1MA4 LINE L1 -323 5977 5001 287 237 0 17 chr5 105957619 105957678 -93672472 - MER58B DNA MER1_type -283 58 1 180 111 0 0 chr5 105957948 105957975 -93672175 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 378 61 0 0 chr5 105958091 105958140 -93672010 + (TG)n Simple_repeat Simple_repeat 2 50 0 940 246 29 0 chr5 105958279 105958486 -93671664 - MER20 DNA MER1_type 0 219 7 693 202 8 0 chr5 105958638 105958767 -93671383 - FLAM_A SINE Alu -3 130 1 28 0 0 0 chr5 105958767 105958795 -93671355 + AT_rich Low_complexity Low_complexity 1 28 0 286 79 0 0 chr5 105958997 105959035 -93671115 - L1M1 LINE L1 -686 5616 5579 1223 70 0 0 chr5 105959036 105959194 -93670956 + L1MA1 LINE L1 6141 6298 -4 227 241 105 78 chr5 105960404 105960595 -93669555 + L1ME4a LINE L1 5800 5995 -126 324 281 69 34 chr5 105961130 105961356 -93668794 + L1ME4a LINE L1 5576 5817 -315 454 288 96 39 chr5 105961443 105961724 -93668426 + L1ME4a LINE L1 5823 6119 -2 446 336 73 69 chr5 105963015 105963509 -93666641 + L2 LINE L2 2014 2509 -805 12126 197 51 14 chr5 105963522 105967410 -93662740 + L1PB2 LINE L1 2118 6149 -2 899 311 97 27 chr5 105967411 105967884 -93662266 + L2 LINE L2 2546 3047 -266 322 284 65 76 chr5 105968414 105968689 -93661461 - Tigger8 DNA MER2_type -349 317 46 23 33 0 0 chr5 105969729 105969759 -93660391 + AT_rich Low_complexity Low_complexity 1 30 0 608 174 0 26 chr5 105969858 105969973 -93660177 - FLAM_C SINE Alu -1 142 31 293 291 75 93 chr5 105970394 105970452 -93659698 - MLT1K LTR MaLR -323 265 207 2073 141 48 20 chr5 105970452 105970806 -93659344 - THE1B LTR MaLR 0 364 1 293 291 75 93 chr5 105970806 105971015 -93659135 - MLT1K LTR MaLR -381 207 3 1199 210 14 38 chr5 105971357 105971647 -93658503 + AluJo SINE Alu 9 291 -21 304 362 0 17 chr5 105972189 105972305 -93657845 - MIR3 SINE MIR -10 198 85 332 189 27 0 chr5 105973649 105973723 -93656427 + L1M4 LINE L1 3155 3230 -2916 5232 223 71 28 chr5 105973729 105974119 -93656031 + L1MC3 LINE L1 6254 6625 -1160 1914 195 14 0 chr5 105974119 105974478 -93655672 - MLT1A1 LTR MaLR 0 365 2 5232 223 71 28 chr5 105974478 105975544 -93654606 + L1MC3 LINE L1 6625 7774 -11 1676 234 81 33 chr5 105975545 105976190 -93653960 - L1MCb LINE L1 -4851 1194 569 24 0 0 0 chr5 105976293 105976317 -93653833 + AT_rich Low_complexity Low_complexity 1 24 0 1012 211 84 0 chr5 105976426 105976687 -93653463 - L1MA9 LINE L1 0 6312 6030 615 287 88 41 chr5 105976696 105977229 -93652921 - L1M4 LINE L1 -4969 1573 1016 448 175 13 32 chr5 105977797 105977951 -93652199 + (TA)n Simple_repeat Simple_repeat 1 151 0 311 221 12 0 chr5 105977970 105978056 -93652094 + (TA)n Simple_repeat Simple_repeat 2 88 0 823 240 32 29 chr5 105979050 105979296 -93650854 - L1MC3 LINE L1 -367 7418 7172 227 313 0 15 chr5 105979302 105979369 -93650781 - MLT1F1 LTR MaLR -465 102 37 304 219 79 0 chr5 105979370 105979484 -93650666 - L1MC3 LINE L1 -687 7098 6976 255 31 0 0 chr5 105981780 105981812 -93648338 + (CA)n Simple_repeat Simple_repeat 1 32 0 22 35 0 0 chr5 105982531 105982560 -93647590 + AT_rich Low_complexity Low_complexity 1 29 0 231 297 16 0 chr5 105982713 105982777 -93647373 + MLT1L LTR MaLR 193 257 -358 22 0 0 0 chr5 105983531 105983553 -93646597 + AT_rich Low_complexity Low_complexity 1 22 0 201 147 0 0 chr5 105983597 105983631 -93646519 + (T)n Simple_repeat Simple_repeat 1 34 0 414 0 0 0 chr5 105983990 105984036 -93646114 + (CA)n Simple_repeat Simple_repeat 1 46 0 308 24 0 24 chr5 105985600 105985642 -93644508 + (TAA)n Simple_repeat Simple_repeat 2 42 0 288 0 0 0 chr5 105986189 105986221 -93643929 + (TG)n Simple_repeat Simple_repeat 1 32 0 182 150 25 0 chr5 105986225 105986265 -93643885 + GA-rich Low_complexity Low_complexity 2 42 0 256 372 51 29 chr5 105986809 105986946 -93643204 + L2 LINE L2 3174 3313 0 2434 63 0 22 chr5 105987323 105987640 -93642510 - AluY SINE Alu -1 310 1 223 231 0 0 chr5 105988573 105988612 -93641538 + polypurine Low_complexity Low_complexity 1 39 0 247 215 9 75 chr5 105989482 105989589 -93640561 + LTR67 LTR ERVL 458 557 0 628 286 68 0 chr5 105990057 105990249 -93639901 - MER58A DNA MER1_type -18 206 2 1814 144 18 0 chr5 105991160 105991444 -93638706 + AluSx SINE Alu 21 309 -3 757 158 24 0 chr5 105991697 105991824 -93638326 - L1PA16 LINE L1 -9 6157 6028 31 88 0 0 chr5 105991919 105991999 -93638151 + AT_rich Low_complexity Low_complexity 1 80 0 620 52 0 103 chr5 105992101 105992198 -93637952 + MER11B LTR ERVK 710 796 -440 821 215 121 18 chr5 105992440 105992663 -93637487 - MLT1D LTR MaLR -33 472 227 1792 225 61 9 chr5 105994458 105994902 -93635248 + MLT1C LTR MaLR 1 467 0 1625 252 57 30 chr5 105995160 105995710 -93634440 - MER77 LTR ERV1 -11 594 60 318 260 169 26 chr5 105995915 105996069 -93634081 - MLT1L LTR MaLR -128 487 312 250 246 16 0 chr5 105996135 105996196 -93633954 - MLT1J LTR MaLR -344 167 106 215 243 68 40 chr5 105996480 105996554 -93633596 + MIR SINE MIR 73 148 -114 21 0 0 0 chr5 105999011 105999032 -93631118 + AT_rich Low_complexity Low_complexity 1 21 0 2222 165 109 7 chr5 105999050 105999499 -93630651 + LOR1a LTR ERV1 1 495 -2 23 0 0 0 chr5 106000212 106000235 -93629915 + AT_rich Low_complexity Low_complexity 1 23 0 218 250 19 0 chr5 106002933 106002985 -93627165 - MIR SINE MIR -121 141 89 26262 47 3 6 chr5 106003529 106007683 -93622467 - L1PA5 LINE L1 -6 6148 2008 14698 87 7 0 chr5 106007686 106009659 -93620491 + L1PA5 LINE L1 1 1987 -4159 180 194 0 0 chr5 106009673 106009704 -93620446 - MIR SINE MIR -114 94 64 1462 204 136 16 chr5 106009758 106010140 -93620010 - MSTA LTR MaLR 0 428 1 2393 179 11 24 chr5 106010568 106011037 -93619113 + MLT1C LTR MaLR 5 467 0 2208 99 0 7 chr5 106011989 106012291 -93617859 + AluSq SINE Alu 1 300 -13 292 143 0 0 chr5 106013333 106013375 -93616775 + MER52-int LTR ERV1 4843 4884 -2207 4500 258 19 12 chr5 106013417 106014629 -93615521 - MER61D-int LTR ERV1 -5747 1249 29 682 235 39 9 chr5 106014642 106014849 -93615301 - MER61D LTR ERV1 -18 750 338 514 298 0 0 chr5 106016126 106016267 -93613883 - L2 LINE L2 0 3313 3173 375 210 116 29 chr5 106016267 106016405 -93613745 - L1MCa LINE L1 -4979 1447 1298 5346 209 18 32 chr5 106016415 106017911 -93612239 + L1PA13 LINE L1 1169 2660 -4137 5765 140 9 15 chr5 106017929 106018996 -93611154 + L1PA15 LINE L1 5104 6165 0 653 278 106 27 chr5 106019179 106019549 -93610601 + L1M4 LINE L1 4219 4643 -1503 378 0 0 0 chr5 106019549 106019591 -93610559 + (TA)n Simple_repeat Simple_repeat 1 42 0 653 278 106 27 chr5 106019591 106019738 -93610412 + L1M4 LINE L1 4643 4777 -1369 276 302 10 0 chr5 106019770 106019866 -93610284 + L1M4 LINE L1 4842 4938 -1208 539 237 68 23 chr5 106019923 106020142 -93610008 + L1M4 LINE L1 5164 5392 -754 * 3221 191 52 81 chr5 106020126 106020323 -93609827 + L1MB8 LINE L1 5188 5389 -789 2444 78 0 0 chr5 106020323 106020630 -93609520 + AluY SINE Alu 1 307 -4 3221 191 52 81 chr5 106020630 106021475 -93608675 + L1MB8 LINE L1 5389 6177 -1 389 274 34 0 chr5 106021493 106021610 -93608540 + L1ME1 LINE L1 6010 6130 -36 243 250 0 0 chr5 106022148 106022216 -93607934 + (CATA)n Simple_repeat Simple_repeat 3 70 0 4699 144 18 1 chr5 106022294 106023058 -93607092 + L1PA14 LINE L1 5385 6161 0 550 236 8 41 chr5 106023193 106023316 -93606834 - MER58A DNA MER1_type 0 119 1 28 48 0 0 chr5 106023898 106023940 -93606210 + AT_rich Low_complexity Low_complexity 1 42 0 27 0 0 0 chr5 106024374 106024401 -93605749 + AT_rich Low_complexity Low_complexity 1 27 0 25 31 0 0 chr5 106024434 106024466 -93605684 + AT_rich Low_complexity Low_complexity 1 32 0 292 296 11 11 chr5 106025479 106025567 -93604583 + MER5A DNA MER1_type 9 96 -93 228 375 62 9 chr5 106025607 106025719 -93604431 - L2 LINE L2 -17 3255 3138 39 50 0 0 chr5 106026008 106026068 -93604082 + AT_rich Low_complexity Low_complexity 1 60 0 1436 252 60 51 chr5 106026083 106026745 -93603405 - L1MC4 LINE L1 -77 7965 7298 27 73 0 0 chr5 106026786 106026841 -93603309 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr5 106026909 106026930 -93603220 + AT_rich Low_complexity Low_complexity 1 21 0 2170 86 4 0 chr5 106027047 106027361 -93602789 - AluSc SINE Alu 0 318 4 23 33 0 0 chr5 106028865 106028895 -93601255 + AT_rich Low_complexity Low_complexity 1 30 0 215 256 0 0 chr5 106029216 106029259 -93600891 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 628 333 81 60 chr5 106029376 106029856 -93600294 - MLT1H LTR MaLR 0 549 60 3005 143 91 43 chr5 106030016 106030674 -93599476 - L1MA8 LINE L1 -8 6283 5594 1863 144 97 37 chr5 106031254 106031656 -93598494 + MSTA LTR MaLR 3 428 0 805 278 81 96 chr5 106031675 106032217 -93597933 + MLT1G3 LTR MaLR 39 521 -9 407 311 8 8 chr5 106032406 106032538 -93597612 - LTR33 LTR ERVL -389 132 1 28 0 0 0 chr5 106032831 106032859 -93597291 + AT_rich Low_complexity Low_complexity 1 28 0 43422 44 1 0 chr5 106034071 106040208 -93589942 + L1PA4 LINE L1 6 6151 -4 2232 228 93 9 chr5 106040228 106040964 -93589186 + L1ME2 LINE L1 5239 6042 -122 194 79 0 26 chr5 106041168 106041206 -93588944 + (TTTTA)n Simple_repeat Simple_repeat 1 37 0 24 0 0 0 chr5 106041284 106041308 -93588842 + AT_rich Low_complexity Low_complexity 1 24 0 4250 132 6 30 chr5 106041380 106042113 -93588037 + L1PA13 LINE L1 5446 6160 -3 4422 181 38 13 chr5 106043980 106045436 -93584714 + L1MA9 LINE L1 4169 5805 -507 306 0 0 0 chr5 106045436 106045470 -93584680 + (CA)n Simple_repeat Simple_repeat 2 35 0 4422 181 38 13 chr5 106045470 106045925 -93584225 + L1MA9 LINE L1 5805 6247 -65 1765 74 0 0 chr5 106045938 106046168 -93583982 + L1PA8 LINE L1 5942 6171 -1 338 147 59 0 chr5 106046169 106046237 -93583913 + L1MA9 LINE L1 6241 6312 0 253 335 222 9 chr5 106046727 106046939 -93583211 + MIR SINE MIR 6 262 0 358 315 37 0 chr5 106047016 106047124 -93583026 + LTR16A LTR ERVL 29 140 -310 204 111 0 0 chr5 106047415 106047451 -93582699 + (TAAAA)n Simple_repeat Simple_repeat 4 39 0 1134 286 97 18 chr5 106047864 106048585 -93581565 + Charlie2 DNA MER1_type 1856 2633 -229 483 291 100 22 chr5 106049595 106049866 -93580284 + MER110 LTR ERV1 166 457 -34 305 341 0 14 chr5 106050813 106051140 -93579010 + A-rich Low_complexity Low_complexity 1 322 0 210 238 37 37 chr5 106051108 106051272 -93578878 + (CAAGA)n Simple_repeat Simple_repeat 2 165 0 * 311 262 151 29 chr5 106051273 106051479 -93578671 + L1 LINE L1 3072 3302 -2844 380 0 0 0 chr5 106051641 106051686 -93578464 + MADE1 DNA Mariner 36 80 0 393 129 0 0 chr5 106051907 106051977 -93578173 + (TG)n Simple_repeat Simple_repeat 1 70 0 420 169 0 0 chr5 106052284 106052361 -93577789 + (TG)n Simple_repeat Simple_repeat 2 78 0 25 51 0 0 chr5 106053609 106053648 -93576502 + AT_rich Low_complexity Low_complexity 1 39 0 2324 67 6 22 chr5 106053743 106054059 -93576091 - AluY SINE Alu 0 311 1 223 231 0 0 chr5 106054982 106055021 -93575129 + polypurine Low_complexity Low_complexity 1 39 0 232 208 19 75 chr5 106055887 106055993 -93574157 + LTR67 LTR ERVL 458 557 0 647 281 68 0 chr5 106056461 106056653 -93573497 - MER58A DNA MER1_type -18 206 2 1782 148 18 0 chr5 106057568 106057852 -93572298 + AluSx SINE Alu 21 309 -3 741 165 24 0 chr5 106058105 106058232 -93571918 - L1PA16 LINE L1 -9 6157 6028 31 88 0 0 chr5 106058326 106058406 -93571744 + AT_rich Low_complexity Low_complexity 1 80 0 4346 153 19 3 chr5 106058456 106059202 -93570948 - L1PA16 LINE L1 -154 6012 5255 2060 233 29 4 chr5 106059217 106059774 -93570376 + L1PA16 LINE L1 4670 5240 -906 25 0 0 0 chr5 106060763 106060788 -93569362 + AT_rich Low_complexity Low_complexity 1 25 0 5413 203 8 14 chr5 106061199 106063206 -93566944 - L1PA13 LINE L1 -3 6160 4154 28 0 0 0 chr5 106063237 106063265 -93566885 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr5 106064003 106064039 -93566111 + AT_rich Low_complexity Low_complexity 1 36 0 536 200 8 0 chr5 106064052 106064182 -93565968 + GA-rich Low_complexity Low_complexity 2 132 0 195 286 57 0 chr5 106065750 106065820 -93564330 + MIR SINE MIR 78 151 -111 29 98 0 0 chr5 106065868 106065960 -93564190 + AT_rich Low_complexity Low_complexity 1 92 0 263 260 120 24 chr5 106066651 106066859 -93563291 + L1ME1 LINE L1 1860 2087 -4453 23 0 0 0 chr5 106066863 106066886 -93563264 + AT_rich Low_complexity Low_complexity 1 23 0 2108 141 12 0 chr5 106066987 106067328 -93562822 - L1PA12 LINE L1 -105 6063 5719 307 130 26 78 chr5 106067325 106067343 -93562807 + L1PA13 LINE L1 6090 6107 -56 * 2304 133 83 8 chr5 106067343 106067741 -93562409 - MSTA LTR MaLR 0 428 1 307 130 26 78 chr5 106067741 106067799 -93562351 + L1PA13 LINE L1 6107 6162 -1 211 267 33 0 chr5 106067808 106067868 -93562282 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 1497 279 50 15 chr5 106067911 106069395 -93560755 + L1ME1 LINE L1 4919 6555 -5 394 347 36 19 chr5 106069531 106069703 -93560447 + MER5B DNA MER1_type 1 186 -3 213 94 0 0 chr5 106069714 106069746 -93560404 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2383 238 64 49 chr5 106069768 106070730 -93559420 + L1ME1 LINE L1 5189 6163 -3 23 33 0 0 chr5 106070836 106070866 -93559284 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr5 106073728 106073764 -93556386 + AT_rich Low_complexity Low_complexity 1 36 0 1395 147 27 0 chr5 106074294 106074519 -93555631 - AluSg/x SINE Alu -14 298 68 5833 174 72 7 chr5 106074519 106076453 -93553697 - L1PBa LINE L1 -4470 2393 188 406 212 12 0 chr5 106076465 106076550 -93553600 - L1PBa LINE L1 -6742 121 36 1570 101 0 0 chr5 106077390 106077597 -93552553 + AluSq SINE Alu 101 307 -6 296 286 45 38 chr5 106077647 106077691 -93552459 + MERVL LTR ERVL 4199 4241 -1244 966 222 145 22 chr5 106077691 106078015 -93552135 - THE1B LTR MaLR 0 364 1 296 286 45 38 chr5 106078015 106078103 -93552047 + MERVL LTR ERVL 4241 4332 -1153 26 0 0 0 chr5 106078274 106078300 -93551850 + AT_rich Low_complexity Low_complexity 1 26 0 2117 108 0 0 chr5 106078476 106078754 -93551396 - AluSg SINE Alu -7 303 26 277 259 34 75 chr5 106078993 106079140 -93551010 + MERVL LTR ERVL 4555 4695 -301 262 343 110 16 chr5 106079432 106079677 -93550473 + LTR16A LTR ERVL 24 291 -159 939 314 73 24 chr5 106080754 106081166 -93548984 - L1MDa LINE L1 -4411 2129 1739 1802 216 51 5 chr5 106081166 106081579 -93548571 + MSTB1 LTR MaLR 1 432 0 939 314 73 24 chr5 106081579 106082009 -93548141 - L1MDa LINE L1 -4801 1739 1245 253 57 0 0 chr5 106082036 106082071 -93548079 - L1M2 LINE L1 -487 5825 5791 698 150 30 162 chr5 106082081 106082315 -93547835 + L1M2 LINE L1 5534 5736 -555 1867 210 140 13 chr5 106082474 106082891 -93547259 + MLT2B2 LTR ERVL 1 482 -33 563 62 12 0 chr5 106082891 106082971 -93547179 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 1867 210 140 13 chr5 106082971 106083010 -93547140 + MLT2B2 LTR ERVL 482 515 0 1674 212 85 16 chr5 106083629 106084054 -93546096 - MLT1C LTR MaLR 0 467 14 24 32 0 0 chr5 106084667 106084698 -93545452 + AT_rich Low_complexity Low_complexity 1 31 0 1959 133 3 3 chr5 106084706 106085020 -93545130 + AluSx SINE Alu 1 314 0 224 302 0 0 chr5 106085727 106085790 -93544360 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 23 33 0 0 chr5 106086393 106086423 -93543727 + AT_rich Low_complexity Low_complexity 1 30 0 587 323 54 22 chr5 106088101 106088324 -93541826 + MLT1I LTR MaLR 4 233 -176 1816 242 29 50 chr5 106088788 106089442 -93540708 + L1M4 LINE L1 4661 5300 -846 2393 202 38 30 chr5 106089883 106090741 -93539409 + L1ME1 LINE L1 4661 5515 -743 1019 94 72 33 chr5 106090741 106090922 -93539228 + MSTA LTR MaLR 1 188 -240 672 282 89 19 chr5 106090924 106091240 -93538910 + L1ME1 LINE L1 5827 6164 -2 609 316 28 23 chr5 106091338 106091553 -93538597 - MIR SINE MIR -29 233 18 1181 168 23 119 chr5 106091706 106091799 -93538351 - L1MA7 LINE L1 -8 6283 6183 814 241 0 0 chr5 106091799 106091965 -93538185 - FAM SINE Alu -9 166 1 1181 168 23 119 chr5 106091965 106092216 -93537934 - L1MA7 LINE L1 -108 6183 5972 259 237 0 118 chr5 106092236 106092329 -93537821 + L2 LINE L2 3227 3308 -5 265 344 10 21 chr5 106094392 106094488 -93535662 - L2 LINE L2 -27 3245 3151 8906 161 53 65 chr5 106094669 106095391 -93534759 + Tigger2 DNA MER2_type 2 730 -1988 2028 139 3 0 chr5 106095391 106095692 -93534458 + AluSx SINE Alu 11 312 0 8906 161 53 65 chr5 106095692 106096140 -93534010 + Tigger2 DNA MER2_type 730 1181 -1537 2304 99 0 0 chr5 106096140 106096443 -93533707 + AluY SINE Alu 1 303 -8 1780 133 3 77 chr5 106096451 106096788 -93533362 + AluSx SINE Alu 1 312 0 8906 161 53 65 chr5 106096788 106097606 -93532544 + Tigger2 DNA MER2_type 1188 1978 -740 2437 183 8 2 chr5 106097607 106098028 -93532122 + MSTB LTR MaLR 1 390 0 7115 190 63 20 chr5 106098028 106098438 -93531712 + MSTB-int LTR MaLR 1 392 -1259 2361 96 3 0 chr5 106098438 106098750 -93531400 + AluSp SINE Alu 1 313 0 7115 190 63 20 chr5 106098750 106099806 -93530344 + MSTB-int LTR MaLR 392 1530 -121 4895 130 122 119 chr5 106099828 106101251 -93528899 + pTR5 LTR ERV1 31 558 -156 518 177 16 24 chr5 106101252 106101376 -93528774 + MSTB-int LTR MaLR 1527 1649 -2 2273 189 9 28 chr5 106101378 106101766 -93528384 + MSTB LTR MaLR 1 382 -44 2184 87 3 17 chr5 106101766 106102064 -93528086 - AluY SINE Alu -17 294 1 2273 189 9 28 chr5 106102064 106102108 -93528042 + MSTB LTR MaLR 382 425 -1 4006 150 32 31 chr5 106102108 106102773 -93527377 + Tigger2 DNA MER2_type 1979 2642 -76 1587 208 11 0 chr5 106102773 106103052 -93527098 + AluJo SINE Alu 1 282 -30 189 74 0 0 chr5 106103055 106103082 -93527068 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 4006 150 32 31 chr5 106103082 106103151 -93526999 + Tigger2 DNA MER2_type 2643 2718 0 24 53 0 0 chr5 106103176 106103214 -93526936 + AT_rich Low_complexity Low_complexity 1 38 0 279 0 0 0 chr5 106103526 106103557 -93526593 + (TG)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr5 106104188 106104210 -93525940 + AT_rich Low_complexity Low_complexity 1 22 0 6722 68 12 2 chr5 106104213 106105098 -93525052 - L1PA7 LINE L1 -7 6147 5254 22 35 0 0 chr5 106106191 106106220 -93523930 + AT_rich Low_complexity Low_complexity 1 29 0 5342 103 21 13 chr5 106106556 106107345 -93522805 + MER11B LTR ERVK 1 796 -440 780 224 121 18 chr5 106107587 106107810 -93522340 - MLT1D LTR MaLR -33 472 227 1824 223 61 9 chr5 106109602 106110046 -93520104 + MLT1C LTR MaLR 1 467 0 3920 34 6 0 chr5 106110839 106111308 -93518842 - L1PA3 LINE L1 0 6155 5684 40 0 0 36 chr5 106111613 106111633 -93518517 + AT_rich Low_complexity Low_complexity 1 20 -33 1746 212 0 0 chr5 106111633 106111940 -93518210 + 7SLRNA srpRNA srpRNA 1 307 -13 40 0 0 36 chr5 106111940 106111974 -93518176 + AT_rich Low_complexity Low_complexity 20 53 0 247 184 0 0 chr5 106113000 106113049 -93517101 - L1MB8 LINE L1 0 6178 6130 198 143 0 0 chr5 106114109 106114144 -93516006 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 330 391 0 9 chr5 106114148 106114258 -93515892 - L2 LINE L2 -1 3271 3163 202 296 42 14 chr5 106114712 106114783 -93515367 - L2 LINE L2 0 3313 3241 513 242 86 19 chr5 106115171 106115427 -93514723 - L1M4 LINE L1 -3764 2382 2110 333 345 36 31 chr5 106115594 106115788 -93514362 - L1ME LINE L1 -419 5702 5508 8907 32 5 0 chr5 106115804 106117650 -93512500 - L1PA4 LINE L1 -2 6153 4301 35 54 0 0 chr5 106118065 106118121 -93512029 + AT_rich Low_complexity Low_complexity 1 56 0 13116 60 2 6 chr5 106118448 106120140 -93510010 - L1P LINE L1 -3771 2375 690 11195 50 7 4 chr5 106120136 106121600 -93508550 + L1P LINE L1 2360 3827 -2319 * 2183 78 0 7 chr5 106121953 106122281 -93507869 - AluY SINE Alu 0 329 4 524 237 115 0 chr5 106123888 106124027 -93506123 - MIR SINE MIR -20 242 88 3531 196 32 7 chr5 106125434 106126124 -93504026 - MER39 LTR ERV1 0 707 1 272 322 122 24 chr5 106126247 106126452 -93503698 - MIR SINE MIR -6 256 32 805 259 60 81 chr5 106126594 106126985 -93503165 - MER34 LTR ERV1 -23 519 140 2056 158 61 17 chr5 106126985 106127395 -93502755 + MSTA LTR MaLR 1 428 0 805 259 60 81 chr5 106127395 106127533 -93502617 - MER34 LTR ERV1 -402 140 1 987 228 34 62 chr5 106127791 106128146 -93502004 + L1ME1 LINE L1 5725 6069 -97 462 18 0 0 chr5 106128172 106128227 -93501923 + (TG)n Simple_repeat Simple_repeat 2 56 0 304 143 196 0 chr5 106128328 106128384 -93501766 - MER89 LTR ERV1 -73 486 420 34 42 0 0 chr5 106128384 106128432 -93501718 + AT_rich Low_complexity Low_complexity 1 48 0 2401 25 0 0 chr5 106128673 106128953 -93501197 - L1PA3 LINE L1 0 6155 5876 4594 19 0 0 chr5 106128953 106129480 -93500670 + L1PA3 LINE L1 5335 5861 -294 258 386 35 7 chr5 106130424 106130569 -93499581 + MIR SINE MIR 19 167 -95 750 245 33 28 chr5 106130578 106130790 -93499360 - MIR SINE MIR -10 252 40 23 0 0 0 chr5 106132263 106132286 -93497864 + AT_rich Low_complexity Low_complexity 1 23 0 297 0 0 0 chr5 106132403 106132436 -93497714 + (TG)n Simple_repeat Simple_repeat 2 34 0 26 0 0 0 chr5 106133817 106133843 -93496307 + AT_rich Low_complexity Low_complexity 1 26 0 2436 211 71 22 chr5 106133886 106134171 -93495979 + MER77 LTR ERV1 1 271 -334 2469 72 0 3 chr5 106134171 106134476 -93495674 + AluY SINE Alu 1 304 -7 2436 211 71 22 chr5 106134476 106134767 -93495383 + MER77 LTR ERV1 271 605 0 24 0 0 0 chr5 106135478 106135502 -93494648 + AT_rich Low_complexity Low_complexity 1 24 0 1653 238 81 33 chr5 106135605 106136146 -93494004 - MLT1F1 LTR MaLR 0 567 1 250 274 144 20 chr5 106136393 106136594 -93493556 - L1MEd LINE L1 -4906 1213 988 1179 213 0 0 chr5 106136894 106137096 -93493054 - LTR47B LTR ERVL 0 443 242 274 350 10 0 chr5 106137196 106137293 -93492857 + L2 LINE L2 573 670 -2644 637 259 95 48 chr5 106137854 106138233 -93491917 + L1ME3 LINE L1 4754 5150 -996 1351 273 117 25 chr5 106138252 106138916 -93491234 + L1ME3 LINE L1 5255 5981 -181 5562 222 50 19 chr5 106138919 106139802 -93490348 - L1 LINE L1 -1672 4474 3518 1619 203 0 7 chr5 106139802 106140102 -93490048 - AluJo SINE Alu -10 302 5 5562 222 50 19 chr5 106140102 106140827 -93489323 - L1 LINE L1 -2628 3518 2817 1865 212 26 2 chr5 106140830 106141254 -93488896 + L1MB1 LINE L1 4479 4912 -1234 431 125 9 45 chr5 106141283 106141395 -93488755 + (TA)n Simple_repeat Simple_repeat 1 108 0 1637 211 18 20 chr5 106141400 106141793 -93488357 + L1MB1 LINE L1 5771 6162 -6 211 216 0 0 chr5 106141979 106142016 -93488134 + (TATG)n Simple_repeat Simple_repeat 4 40 0 22 56 0 0 chr5 106142138 106142174 -93487976 + AT_rich Low_complexity Low_complexity 1 36 0 1563 208 69 10 chr5 106142175 106142583 -93487567 - L1MC/D LINE L1 -466 5845 5414 1308 237 75 71 chr5 106142579 106143102 -93487048 + L1MD2 LINE L1 5816 6340 -19 * 29 70 0 0 chr5 106143766 106143823 -93486327 + AT_rich Low_complexity Low_complexity 1 57 0 348 64 0 0 chr5 106144062 106144109 -93486041 + (TA)n Simple_repeat Simple_repeat 2 48 0 736 263 25 32 chr5 106144567 106144852 -93485298 - L1MC/D LINE L1 -2400 3815 3533 479 355 111 43 chr5 106145597 106146355 -93483795 - L2 LINE L2 -954 2360 1552 28 29 0 0 chr5 106147163 106147198 -93482952 + AT_rich Low_complexity Low_complexity 1 35 0 339 287 27 27 chr5 106147611 106147761 -93482389 - L1MC/D LINE L1 -4534 1862 1713 328 321 51 69 chr5 106147763 106148096 -93482054 - HAL1 LINE L1 -1219 1288 962 18796 98 5 2 chr5 106148138 106150866 -93479284 - L1P LINE L1 -978 5168 2432 3005 93 2 0 chr5 106150862 106151258 -93478892 - L1P3 LINE L1 -6061 400 4 * 1791 160 17 130 chr5 106151258 106151734 -93478416 + LTR38B LTR ERV1 189 610 0 1459 271 27 0 chr5 106152223 106152626 -93477524 + L1ME LINE L1 5333 5746 -420 348 267 33 73 chr5 106152732 106152882 -93477268 - MIR SINE MIR 0 262 119 1671 228 41 43 chr5 106153159 106153598 -93476552 + LTR47B LTR ERVL 1 438 -5 306 318 41 94 chr5 106155129 106155447 -93474703 + LTR57-int LTR ERVL 1494 1794 -4253 1055 333 33 31 chr5 106155660 106156206 -93473944 + LTR57-int LTR ERVL 1851 2397 -2946 279 286 322 38 chr5 106156213 106156369 -93473781 - MER52A LTR ERV1 -5 1750 1640 2872 80 3 5 chr5 106156369 106156745 -93473405 - THE1C LTR MaLR 0 375 1 279 286 322 38 chr5 106156745 106157014 -93473136 - MER52A LTR ERV1 -115 1640 1204 * 1015 238 256 58 chr5 106156992 106157618 -93472532 - LTR28 LTR ERV1 -270 750 1 1894 132 0 0 chr5 106157688 106157945 -93472205 + AluSx SINE Alu 20 276 -36 2413 97 0 0 chr5 106159044 106159353 -93470797 + AluSc SINE Alu 1 309 0 478 309 54 22 chr5 106159627 106159947 -93470203 + LTR57-int LTR ERVL 3801 4669 -985 272 228 0 63 chr5 106160737 106160816 -93469334 + MER4-int LTR ERV1 4185 4258 -2340 1999 54 0 4 chr5 106160962 106161201 -93468949 + AluY SINE Alu 53 290 -21 1034 165 43 0 chr5 106161361 106161549 -93468601 - L1PA13 LINE L1 0 6163 5968 238 318 114 42 chr5 106161621 106161857 -93468293 + MIR SINE MIR 10 262 0 38 22 0 0 chr5 106162230 106162275 -93467875 + AT_rich Low_complexity Low_complexity 1 45 0 237 159 0 0 chr5 106162276 106162320 -93467830 + (TA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr5 106162648 106162669 -93467481 + AT_rich Low_complexity Low_complexity 1 21 0 11645 100 2 1 chr5 106162878 106164455 -93465695 + THE1A-int LTR MaLR 2 1580 0 1994 112 19 70 chr5 106164455 106164829 -93465321 + THE1A LTR MaLR 1 355 0 12857 34 2 2 chr5 106164882 106167204 -93462946 + L1PA4 LINE L1 3832 6152 -3 5608 217 122 73 chr5 106167364 106167711 -93462439 + L1MDa LINE L1 17 346 -6194 1840 152 37 35 chr5 106167711 106168085 -93462065 - THE1C LTR MaLR 0 375 1 5608 217 122 73 chr5 106168085 106169605 -93460545 + L1MDa LINE L1 346 2054 -4486 273 143 0 0 chr5 106169605 106169647 -93460503 - MLT1E2 LTR MaLR -535 91 50 5608 217 122 73 chr5 106169647 106169983 -93460167 + L1MDa LINE L1 2054 2372 -4168 26 93 0 0 chr5 106169984 106170059 -93460091 + AT_rich Low_complexity Low_complexity 1 75 0 43 20 0 0 chr5 106170151 106170201 -93459949 + AT_rich Low_complexity Low_complexity 1 50 0 1398 217 39 14 chr5 106170271 106170557 -93459593 + AluJo SINE Alu 1 293 -19 1969 126 0 0 chr5 106170562 106170832 -93459318 + AluSg SINE Alu 1 270 -40 429 36 0 0 chr5 106170832 106170887 -93459263 + (TC)n Simple_repeat Simple_repeat 2 56 0 376 223 25 0 chr5 106170908 106171029 -93459121 - L1M4 LINE L1 -1720 4426 4303 227 217 22 0 chr5 106171236 106171282 -93458868 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 775 363 22 49 chr5 106171282 106171734 -93458416 + L1MD1 LINE L1 396 835 -6234 1272 270 51 11 chr5 106171754 106172365 -93457785 + L1M3 LINE L1 4065 4699 -1447 275 214 0 18 chr5 106172366 106172422 -93457728 + L1MD1 LINE L1 960 1014 -6084 2202 282 63 29 chr5 106173189 106174720 -93455430 + L1MD1 LINE L1 1491 2777 -4390 305 153 0 0 chr5 106174721 106174780 -93455370 + L1MA4 LINE L1 6147 6205 -95 800 244 10 10 chr5 106174780 106174973 -93455177 + MLT1A1 LTR MaLR 171 363 -2 8121 204 36 26 chr5 106174999 106179218 -93450932 + L1MA8 LINE L1 3293 7542 -168 1579 166 17 42 chr5 106179218 106179530 -93450620 - AluJo SINE Alu 0 305 1 8121 204 36 26 chr5 106179530 106179681 -93450469 + L1MA8 LINE L1 7542 7690 -20 930 256 100 4 chr5 106179721 106180277 -93449873 + L1M3 LINE L1 4715 5379 -801 266 0 29 0 chr5 106180277 106180311 -93449839 + (TA)n Simple_repeat Simple_repeat 1 35 0 930 256 100 4 chr5 106180311 106180385 -93449765 + L1M3 LINE L1 5379 5445 -735 * 2846 238 68 50 chr5 106180379 106181994 -93448156 + L1MD1 LINE L1 4836 6493 -743 193 128 43 0 chr5 106181994 106182041 -93448109 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 401 239 11 23 chr5 106182069 106182157 -93447993 + MER21B LTR ERV1 1 87 -776 806 251 33 24 chr5 106182214 106182425 -93447725 + MER21B LTR ERV1 98 310 -553 992 241 71 47 chr5 106182429 106182671 -93447479 + MER21B LTR ERV1 459 713 -150 252 0 0 0 chr5 106182671 106182699 -93447451 + (AATTG)n Simple_repeat Simple_repeat 2 29 0 992 241 71 47 chr5 106182699 106182796 -93447354 + MER21B LTR ERV1 713 806 -57 282 132 0 0 chr5 106182822 106182875 -93447275 + (TTG)n Simple_repeat Simple_repeat 2 54 0 1443 187 49 94 chr5 106182879 106183345 -93446805 + L1MD1 LINE L1 6510 6954 -309 1110 224 21 0 chr5 106183704 106183941 -93446209 - MER54A LTR ERVL 0 901 660 1081 122 84 142 chr5 106184666 106185118 -93445032 + MSTA LTR MaLR 3 428 0 204 188 0 0 chr5 106185280 106185349 -93444801 + CT-rich Low_complexity Low_complexity 2 70 0 2057 224 119 15 chr5 106185488 106186100 -93444050 + L1MDa LINE L1 737 1412 -5128 421 171 0 24 chr5 106186122 106186204 -93443946 + MER66B LTR ERV1 407 486 0 1561 248 70 44 chr5 106187936 106188437 -93441713 + LTR55 LTR ERV 4 517 -31 26 30 0 0 chr5 106188592 106188625 -93441525 + AT_rich Low_complexity Low_complexity 1 33 0 457 228 176 7 chr5 106190450 106190586 -93439564 - MIR SINE MIR -71 191 33 427 111 97 0 chr5 106190957 106191029 -93439121 + MLT1J2 LTR MaLR 354 432 -18 2238 118 3 9 chr5 106193081 106193428 -93436722 + L1PB4 LINE L1 5447 5791 -365 216 163 0 0 chr5 106193428 106193471 -93436679 + (TA)n Simple_repeat Simple_repeat 1 43 0 2009 172 11 3 chr5 106193485 106193839 -93436311 + L1PB4 LINE L1 5796 6152 -4 1487 170 21 4 chr5 106193859 106194100 -93436050 - MSTB LTR MaLR 0 426 182 1432 194 21 24 chr5 106194934 106195316 -93434834 + L1 LINE L1 4487 4867 -1279 372 346 68 5 chr5 106196772 106196977 -93433173 - L3b LINE CR1 -78 1505 1288 228 365 104 0 chr5 106196991 106197087 -93433063 + L2 LINE L2 3167 3272 0 633 223 44 123 chr5 106197167 106197508 -93432642 + MER46C DNA MER2_type 8 321 -17 299 277 47 47 chr5 106198393 106198646 -93431504 + L1ME4a LINE L1 5295 5547 -617 296 155 43 35 chr5 106198695 106198811 -93431339 + (TA)n Simple_repeat Simple_repeat 1 117 0 216 0 0 0 chr5 106198822 106198846 -93431304 + (CA)n Simple_repeat Simple_repeat 2 25 0 377 258 126 14 chr5 106198846 106199078 -93431072 + L1ME4a LINE L1 5598 5857 -264 446 338 54 18 chr5 106200642 106200864 -93429286 + L2 LINE L2 2129 2358 -956 324 351 16 37 chr5 106200893 106201081 -93429069 + L2 LINE L2 2521 2704 -610 533 261 37 0 chr5 106201210 106201371 -93428779 - L2 LINE L2 -1410 1904 1738 960 159 16 11 chr5 106202309 106202491 -93427659 - LTR2 LTR ERV1 0 449 267 2119 114 3 29 chr5 106203952 106204267 -93425883 - AluSq SINE Alu -6 307 1 396 310 48 7 chr5 106206431 106206576 -93423574 + MIR SINE MIR 102 252 -10 1450 152 51 87 chr5 106206701 106207090 -93423060 + THE1C LTR MaLR 1 375 0 2084 280 47 38 chr5 106207091 106207952 -93422198 - L1MC4 LINE L1 -442 7600 6733 27 87 0 0 chr5 106208492 106208561 -93421589 + AT_rich Low_complexity Low_complexity 1 69 0 200 224 0 20 chr5 106208567 106208616 -93421534 + (TATATG)n Simple_repeat Simple_repeat 5 52 0 5214 159 18 19 chr5 106209787 106210779 -93419371 - L1MA4A LINE L1 0 6303 5313 2172 106 14 17 chr5 106210922 106211272 -93418878 - THE1C LTR MaLR -26 349 1 2045 74 13 58 chr5 106211664 106211976 -93418174 - AluSc SINE Alu -11 298 1 979 97 0 0 chr5 106211976 106212100 -93418050 - AluSg1 SINE Alu -182 127 4 960 231 89 14 chr5 106212531 106212586 -93417564 + LTR16A1 LTR ERVL 1 50 -407 1284 216 26 92 chr5 106212586 106213086 -93417064 + MLT1C LTR MaLR 1 467 0 960 231 89 14 chr5 106213086 106213375 -93416775 + LTR16A1 LTR ERVL 50 457 0 202 262 0 0 chr5 106213616 106213658 -93416492 + (TA)n Simple_repeat Simple_repeat 1 42 0 195 42 0 0 chr5 106213679 106213703 -93416447 + (TA)n Simple_repeat Simple_repeat 1 24 0 2319 107 3 8 chr5 106213764 106214119 -93416031 + L1PA13 LINE L1 5793 6145 -18 650 269 50 83 chr5 106214119 106214207 -93415943 - L2 LINE L2 -777 2537 2448 878 227 20 5 chr5 106214207 106214410 -93415740 + MER3 DNA MER1_type 2 207 -2 650 269 50 83 chr5 106214410 106214719 -93415431 - L2 LINE L2 -866 2448 2153 1502 123 23 0 chr5 106214773 106214993 -93415157 - AluSg/x SINE Alu -4 308 84 449 147 127 13 chr5 106216009 106216166 -93413984 - AluSg/x SINE Alu -25 284 110 1897 155 0 3 chr5 106216906 106217209 -93412941 - AluJb SINE Alu -10 302 1 221 359 97 28 chr5 106217214 106217431 -93412719 + L2 LINE L2 2828 3059 -213 570 67 0 0 chr5 106218137 106218212 -93411938 + (GGAA)n Simple_repeat Simple_repeat 4 78 0 23 33 0 0 chr5 106218843 106218873 -93411277 + AT_rich Low_complexity Low_complexity 1 30 0 2409 58 7 0 chr5 106218883 106219177 -93410973 + AluY SINE Alu 1 296 -15 23 0 0 0 chr5 106220039 106220062 -93410088 + AT_rich Low_complexity Low_complexity 1 23 0 571 265 13 0 chr5 106220275 106220426 -93409724 - MLT1L LTR MaLR -32 583 431 338 274 204 47 chr5 106220515 106220770 -93409380 - MLT1L LTR MaLR -301 314 20 320 154 19 66 chr5 106221079 106221403 -93408747 + (TA)n Simple_repeat Simple_repeat 1 308 0 1345 171 65 3 chr5 106221405 106221715 -93408435 - L1MA8 LINE L1 -2 6289 5961 2264 112 0 0 chr5 106221986 106222291 -93407859 + AluSx SINE Alu 3 307 -5 345 308 15 0 chr5 106222983 106223113 -93407037 + L1M4 LINE L1 4093 4224 -1922 6702 40 5 3 chr5 106223117 106223973 -93406177 + L1PA5 LINE L1 5223 6080 -74 3007 183 20 34 chr5 106224092 106225279 -93404871 + L1MA3 LINE L1 4898 6043 -262 1522 222 55 8 chr5 106225023 106225384 -93404766 + L1PB4 LINE L1 5776 6153 -3 * 22 0 0 0 chr5 106226525 106226547 -93403603 + AT_rich Low_complexity Low_complexity 1 22 0 2037 112 10 14 chr5 106226600 106226894 -93403256 - AluSx SINE Alu -19 293 1 245 316 50 36 chr5 106227082 106227221 -93402929 - L3 LINE CR1 -183 1394 1254 197 329 25 13 chr5 106227241 106227320 -93402830 - MIR3 SINE MIR -23 185 106 23 0 0 0 chr5 106227550 106227573 -93402577 + AT_rich Low_complexity Low_complexity 1 23 0 2339 127 32 0 chr5 106227839 106228240 -93401910 - L1PA15 LINE L1 -306 5859 5446 24 0 0 0 chr5 106228311 106228335 -93401815 + AT_rich Low_complexity Low_complexity 1 24 0 194 79 0 26 chr5 106228412 106228450 -93401700 + (TAAAA)n Simple_repeat Simple_repeat 1 37 0 1805 230 118 13 chr5 106228628 106229362 -93400788 - L1ME2 LINE L1 -112 6052 5239 6677 49 11 1 chr5 106229382 106230239 -93399911 - L1PA4 LINE L1 -4 6151 5287 231 250 12 71 chr5 106230424 106230508 -93399642 - LTR2 LTR ERV1 -368 81 3 1622 205 40 0 chr5 106230512 106230834 -93399316 - Harlequin LTR ERV1 -3 6893 6559 8280 136 2 0 chr5 106230837 106232041 -93398109 - Harlequin LTR ERV1 -2073 5740 4535 1427 153 5 0 chr5 106232041 106232263 -93397887 - Harlequin LTR ERV1 -3559 4254 4032 258 239 34 23 chr5 106232499 106232587 -93397563 - MLT2E LTR ERVL -34 594 506 2433 71 0 0 chr5 106233307 106233618 -93396532 + AluY SINE Alu 1 311 0 194 296 113 70 chr5 106233625 106233740 -93396410 - L2 LINE L2 -17 3255 3136 458 265 12 42 chr5 106233853 106234019 -93396131 + LTR2 LTR ERV1 3 163 -286 750 224 11 11 chr5 106234023 106234206 -93395944 + LTR2 LTR ERV1 267 449 0 2073 146 13 28 chr5 106234206 106234604 -93395546 + Harlequin LTR ERV1 1 392 -6504 423 155 19 19 chr5 106234966 106235069 -93395081 - L1 LINE L1 -1640 4506 4404 23 92 0 0 chr5 106235604 106235669 -93394481 + AT_rich Low_complexity Low_complexity 1 65 0 286 289 93 0 chr5 106235732 106235829 -93394321 - MIR SINE MIR -75 187 82 253 363 134 23 chr5 106236072 106236243 -93393907 - MIR SINE MIR -70 192 3 525 71 14 0 chr5 106237298 106237368 -93392782 + AluSp SINE Alu 67 137 -176 7710 54 122 6 chr5 106237368 106238435 -93391715 + L1P LINE L1 1 1191 -4955 5042 102 129 134 chr5 106238560 106240072 -93390078 + pTR5 LTR ERV1 741 2438 0 1745 118 8 0 chr5 106240074 106240320 -93389830 + HERVE LTR ERV1 631 878 -6935 * 6730 137 8 5 chr5 106240307 106241329 -93388821 + HERVE LTR ERV1 3001 4025 -3788 27 29 0 0 chr5 106243324 106243358 -93386792 + AT_rich Low_complexity Low_complexity 1 34 0 1798 84 10 71 chr5 106243481 106243623 -93386527 + AluSx SINE Alu 1 115 -197 2034 138 0 0 chr5 106243623 106243919 -93386231 + AluSx SINE Alu 1 296 -16 1798 84 10 71 chr5 106243919 106244085 -93386065 + AluSx SINE Alu 115 290 -22 2155 117 0 9 chr5 106245706 106246022 -93384128 + AluSq SINE Alu 1 313 0 505 195 153 9 chr5 106247331 106247485 -93382665 + MSTB1 LTR MaLR 1 199 -231 604 176 92 0 chr5 106247485 106247604 -93382546 + FLAM_C SINE Alu 1 130 -13 1186 159 52 17 chr5 106247604 106247836 -93382314 + MSTB1 LTR MaLR 193 432 0 450 309 243 10 chr5 106248807 106249608 -93380542 - L2 LINE L2 -3 3310 2309 280 318 32 16 chr5 106249668 106249794 -93380356 - L1ME LINE L1 -475 5646 5519 180 295 148 74 chr5 106249941 106249977 -93380173 - MIR3 SINE MIR -21 187 155 2091 109 0 50 chr5 106249977 106250299 -93379851 + AluSg SINE Alu 1 306 -4 180 295 148 74 chr5 106250299 106250384 -93379766 - MIR3 SINE MIR -53 155 57 26 74 0 0 chr5 106250729 106250783 -93379367 + AT_rich Low_complexity Low_complexity 1 54 0 2181 111 0 7 chr5 106252246 106252553 -93377597 + AluSx SINE Alu 1 305 -7 405 123 0 0 chr5 106252559 106252624 -93377526 + (TG)n Simple_repeat Simple_repeat 2 66 0 289 278 42 14 chr5 106252671 106252743 -93377407 - MER5A DNA MER1_type -73 116 43 267 146 0 0 chr5 106252907 106252948 -93377202 + Alu SINE Alu 248 288 -13 459 113 0 0 chr5 106252967 106253038 -93377112 + (TG)n Simple_repeat Simple_repeat 2 72 0 289 278 42 14 chr5 106253085 106253157 -93376993 - MER5A DNA MER1_type -73 116 43 234 304 0 0 chr5 106253877 106253933 -93376217 + L2 LINE L2 3250 3305 -8 183 261 225 27 chr5 106254915 106255026 -93375124 + MIR SINE MIR 122 254 -8 221 232 0 80 chr5 106255422 106255560 -93374590 + (CATA)n Simple_repeat Simple_repeat 2 128 0 23 33 0 0 chr5 106255731 106255761 -93374389 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr5 106255990 106256027 -93374123 + AT_rich Low_complexity Low_complexity 1 37 0 8508 223 51 34 chr5 106256073 106257338 -93372812 - L1MD1 LINE L1 -326 6310 5068 1678 155 120 23 chr5 106257338 106257680 -93372470 + THE1C LTR MaLR 1 375 0 8508 223 51 34 chr5 106257680 106258868 -93371282 - L1MD1 LINE L1 -1568 5068 3901 587 90 0 0 chr5 106258868 106258946 -93371204 + MADE1 DNA Mariner 1 78 -2 8508 223 51 34 chr5 106258946 106260461 -93369689 - L1MD1 LINE L1 -2735 3901 2297 2591 253 112 22 chr5 106260454 106261261 -93368889 - L1MD1 LINE L1 -5498 1042 164 * 424 321 55 44 chr5 106261357 106261650 -93368500 + ERVL LTR ERVL 4900 5195 -569 333 323 74 37 chr5 106262133 106262430 -93367720 + ERVL LTR ERVL 4888 5195 -569 331 229 31 31 chr5 106264640 106264736 -93365414 + Zaphod DNA AcHobo 3936 4031 0 1074 161 31 0 chr5 106264873 106265065 -93365085 + MER2 DNA MER2_type 12 209 -136 529 167 0 0 chr5 106265096 106265174 -93364976 + MER2 DNA MER2_type 268 345 0 751 304 72 28 chr5 106265462 106265890 -93364260 - HAL1b LINE L1 -806 542 96 1876 144 40 3 chr5 106266116 106266414 -93363736 - AluSx SINE Alu -3 309 1 395 297 154 21 chr5 106267341 106267671 -93362479 + L1MC/D LINE L1 5299 5672 -2136 33 25 0 0 chr5 106267741 106267781 -93362369 + AT_rich Low_complexity Low_complexity 1 40 0 13820 217 31 25 chr5 106269079 106272406 -93357744 + L1MA5 LINE L1 1438 4815 -2033 2352 115 0 0 chr5 106272406 106272719 -93357431 - AluSq SINE Alu 0 313 1 13820 217 31 25 chr5 106272719 106273992 -93356158 + L1MA5 LINE L1 4815 6079 -769 3045 170 18 13 chr5 106273998 106274599 -93355551 + L1MA5 LINE L1 6394 6997 -5 28 48 0 0 chr5 106275599 106275641 -93354509 + AT_rich Low_complexity Low_complexity 1 42 0 256 289 0 88 chr5 106275861 106275975 -93354175 - MIR SINE MIR 0 262 159 400 217 0 0 chr5 106276386 106276455 -93353695 + AluJ/FLAM SINE Alu 1 69 -243 917 188 19 0 chr5 106276455 106276609 -93353541 + AluJo/FRAM SINE Alu 137 293 -9 2208 121 3 0 chr5 106277651 106277958 -93352192 - AluSx SINE Alu -4 308 1 339 29 87 0 chr5 106278689 106278758 -93351392 + (TA)n Simple_repeat Simple_repeat 1 75 0 198 103 0 0 chr5 106278912 106278941 -93351209 + (CA)n Simple_repeat Simple_repeat 1 29 0 212 256 12 0 chr5 106278946 106279032 -93351118 + (TA)n Simple_repeat Simple_repeat 2 88 0 244 208 0 0 chr5 106279033 106279086 -93351064 + (CA)n Simple_repeat Simple_repeat 2 54 0 346 353 86 25 chr5 106279906 106280184 -93349966 - HAL1b LINE L1 -814 534 240 33 0 0 0 chr5 106280194 106280227 -93349923 + AT_rich Low_complexity Low_complexity 1 33 0 206 32 32 0 chr5 106280312 106280343 -93349807 + (TG)n Simple_repeat Simple_repeat 2 33 0 1349 168 0 5 chr5 106281250 106281470 -93348680 + AluJb SINE Alu 82 300 -12 190 368 26 0 chr5 106282159 106282235 -93347915 - L2 LINE L2 -4 3268 3191 2008 141 7 0 chr5 106282860 106283165 -93346985 - AluSx SINE Alu -5 307 1 2229 148 3 19 chr5 106284185 106284550 -93345600 - Tigger1 DNA MER2_type 0 2418 2060 1363 200 43 40 chr5 106284548 106284873 -93345277 - Tigger1 DNA MER2_type -2092 326 1 * 28 42 0 56 chr5 106285118 106285138 -93345012 + AT_rich Low_complexity Low_complexity 1 21 -47 1677 148 24 7 chr5 106285138 106285258 -93344892 - L1PA16 LINE L1 -9 6157 6041 2297 102 7 0 chr5 106285258 106285562 -93344588 - AluSx SINE Alu -6 306 1 1677 148 24 7 chr5 106285562 106285732 -93344418 - L1PA16 LINE L1 -125 6041 5862 28 42 0 56 chr5 106285732 106285783 -93344367 + AT_rich Low_complexity Low_complexity 21 68 0 32 75 0 0 chr5 106286169 106286236 -93343914 + AT_rich Low_complexity Low_complexity 1 67 0 410 199 22 39 chr5 106286926 106287107 -93343043 + CT-rich Low_complexity Low_complexity 2 179 0 896 155 0 0 chr5 106287482 106287611 -93342539 - FRAM SINE Alu -15 161 33 402 331 64 81 chr5 106287910 106288093 -93342057 + L2 LINE L2 2813 2998 -274 2008 117 11 0 chr5 106288093 106288375 -93341775 - AluSx SINE Alu -22 290 6 402 331 64 81 chr5 106288375 106288659 -93341491 + L2 LINE L2 2998 3272 0 256 315 33 22 chr5 106288789 106288881 -93341269 + MIR3 SINE MIR 98 190 -18 501 250 104 0 chr5 106288892 106289036 -93341114 + MER20 DNA MER1_type 33 191 -28 208 237 31 82 chr5 106289082 106289179 -93340971 + L2 LINE L2 3143 3234 -79 1215 179 30 17 chr5 106289716 106289950 -93340200 + MER8 DNA MER2_type 2 238 -1 21 82 0 0 chr5 106290068 106290117 -93340033 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr5 106290614 106290636 -93339514 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr5 106291141 106291165 -93338985 + (A)n Simple_repeat Simple_repeat 1 24 0 303 83 0 0 chr5 106292452 106292500 -93337650 - L1PA13 LINE L1 -4 6159 6112 5964 208 40 1 chr5 106292526 106293887 -93336263 - L1 LINE L1 -2600 4965 3551 8892 163 26 11 chr5 106293887 106294880 -93335270 - L1 LINE L1 -4264 3301 2325 2117 117 0 10 chr5 106294880 106295180 -93334970 - AluSx SINE Alu -15 297 1 8892 163 26 11 chr5 106295180 106297254 -93332896 - L1 LINE L1 -5240 2325 79 3627 189 31 10 chr5 106297290 106298063 -93332087 - L1 LINE L1 -1460 4686 3898 514 267 47 27 chr5 106298889 106299039 -93331111 - MIR3 SINE MIR -33 175 23 219 304 22 0 chr5 106299223 106299315 -93330835 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 23 33 0 0 chr5 106300408 106300438 -93329712 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr5 106300726 106300761 -93329389 + AT_rich Low_complexity Low_complexity 1 35 0 1328 192 3 34 chr5 106301454 106301745 -93328405 - AluJb SINE Alu -13 299 18 509 86 0 12 chr5 106302434 106302515 -93327635 + (CA)n Simple_repeat Simple_repeat 2 81 0 1838 151 55 19 chr5 106303202 106303527 -93326623 - MER1B DNA MER1_type 0 337 1 495 211 96 80 chr5 106305736 106305935 -93324215 - L1MC4a LINE L1 -1 7807 7606 1837 201 133 99 chr5 106305936 106306695 -93323455 + LTR1B LTR ERV1 1 981 -39 351 276 48 0 chr5 106306782 106306887 -93323263 - L1MC4a LINE L1 -207 7601 7492 968 295 29 26 chr5 106306898 106307317 -93322833 - MLT1F1 LTR MaLR -11 556 93 2046 221 107 12 chr5 106307552 106308213 -93321937 - L1MC4a LINE L1 -313 7495 6772 631 247 50 0 chr5 106308259 106308436 -93321714 - L1MC4a LINE L1 -1191 6594 6411 1965 214 22 99 chr5 106308440 106308682 -93321468 - MLT1E2 LTR MaLR -1 625 366 1850 176 111 3 chr5 106308682 106309068 -93321082 + MSTA LTR MaLR 1 428 0 1965 214 22 99 chr5 106309068 106309504 -93320646 - MLT1E2 LTR MaLR -260 366 1 369 274 38 70 chr5 106309562 106309748 -93320402 + L1M4 LINE L1 12 191 -6668 1740 158 10 20 chr5 106309758 106310061 -93320089 + AluJb SINE Alu 11 310 -2 1821 269 62 33 chr5 106310347 106311416 -93318734 + L1M4 LINE L1 1318 2409 -4550 1694 196 30 45 chr5 106311470 106311940 -93318210 + L1M4 LINE L1 5742 6204 -753 289 299 55 39 chr5 106311948 106312046 -93318104 + L1MC4a LINE L1 6627 6729 -1079 213 65 0 0 chr5 106312046 106312077 -93318073 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 289 299 55 39 chr5 106312077 106312105 -93318045 + L1MC4a LINE L1 6729 6755 -1053 207 0 0 0 chr5 106312294 106312317 -93317833 + (CAA)n Simple_repeat Simple_repeat 2 24 0 233 346 12 0 chr5 106313302 106313383 -93316767 + MER5B DNA MER1_type 11 92 -86 253 259 0 0 chr5 106313385 106313439 -93316711 - MER5B DNA MER1_type -124 54 1 855 180 6 0 chr5 106314287 106314448 -93315702 - FRAM SINE Alu -16 160 1 367 257 217 7 chr5 106314627 106314779 -93315371 - MIR SINE MIR -58 204 21 210 118 0 0 chr5 106314981 106315015 -93315135 + (A)n Simple_repeat Simple_repeat 1 34 0 4366 150 25 14 chr5 106316082 106316844 -93313306 - Tigger1 DNA MER2_type 0 2418 1649 1975 119 44 107 chr5 106316846 106317276 -93312874 - Tigger1 DNA MER2_type -1055 1363 961 6391 161 14 8 chr5 106317277 106319432 -93310718 + L1PB1 LINE L1 3988 6151 0 1099 101 18 101 chr5 106319462 106319736 -93310414 - Tigger1 DNA MER2_type -1442 976 640 3498 114 13 6 chr5 106319751 106320275 -93309875 + Tigger1 DNA MER2_type 279 806 -1612 1327 171 25 8 chr5 106320273 106320518 -93309632 - Tigger1 DNA MER2_type -2169 249 1 * 198 333 29 36 chr5 106321331 106321469 -93308681 + L2 LINE L2 2301 2437 -877 1512 208 55 72 chr5 106321985 106322529 -93307621 - MER67C LTR ERV1 0 514 9 2493 52 7 0 chr5 106323193 106323500 -93306650 - AluY SINE Alu -2 309 1 1736 120 67 0 chr5 106324075 106324358 -93305792 + AluSg SINE Alu 1 302 -8 1901 260 52 11 chr5 106324433 106324967 -93305183 - MER119 DNA MER1_type 0 583 28 3236 173 54 19 chr5 106324967 106325651 -93304499 + MER67C LTR ERV1 1 708 -2 392 256 45 83 chr5 106325916 106326182 -93303968 + HAL1 LINE L1 2252 2507 0 237 65 0 0 chr5 106327549 106327580 -93302570 + (TG)n Simple_repeat Simple_repeat 2 32 0 4508 171 15 17 chr5 106327582 106328469 -93301681 - L1MA9 LINE L1 -162 6150 5266 213 274 0 0 chr5 106328469 106328553 -93301597 + (TA)n Simple_repeat Simple_repeat 2 85 0 1839 164 0 0 chr5 106328575 106328862 -93301288 - AluSx SINE Alu -25 287 1 3047 203 12 8 chr5 106328863 106329514 -93300636 - L1MA9 LINE L1 -870 5276 4623 * 7810 18 0 0 chr5 106329511 106330413 -93299737 - L1PA2 LINE L1 0 6155 5254 13125 30 1 1 chr5 106329513 106331853 -93298297 - L1PA2 LINE L1 -2 6153 3813 3641 30 0 0 chr5 106331853 106332282 -93297868 + L1PA2 LINE L1 3402 3830 -2316 5459 190 46 82 chr5 106332282 106332583 -93297567 - L1MA9 LINE L1 -1510 4636 4326 1891 149 7 29 chr5 106332583 106332891 -93297259 + AluSx SINE Alu 1 301 -11 5459 190 46 82 chr5 106332891 106333682 -93296468 - L1MA9 LINE L1 -1820 4326 3623 10068 129 14 0 chr5 106333682 106336034 -93294116 - L1PA10 LINE L1 -11 6157 3779 5459 190 46 82 chr5 106336034 106336643 -93293507 - L1MA9 LINE L1 -2523 3623 2994 447 135 14 0 chr5 106336993 106337067 -93293083 + MADE1 DNA Mariner 6 80 0 2986 80 3 0 chr5 106337469 106337858 -93292292 + HERVFH19I LTR ERV1 7330 7719 0 2318 123 173 5 chr5 106337858 106338274 -93291876 + LTR19A LTR ERV1 1 486 0 199 300 191 18 chr5 106339249 106339359 -93290791 - MIR SINE MIR -32 230 102 1157 99 0 0 chr5 106339779 106339940 -93290210 + HERVFH19I LTR ERV1 7477 7637 -82 21 36 0 0 chr5 106341161 106341189 -93288961 + AT_rich Low_complexity Low_complexity 1 28 0 6824 162 27 31 chr5 106342010 106344233 -93285917 + L1PA6 LINE L1 11 2030 -4116 324 0 0 0 chr5 106344233 106344269 -93285881 + (T)n Simple_repeat Simple_repeat 1 36 0 3269 13 0 0 chr5 106344272 106344644 -93285506 - L1HS LINE L1 0 6155 5784 * 40299 36 27 1 chr5 106344642 106349596 -93280554 - L1P LINE L1 -1063 5083 3 1251 117 0 0 chr5 106349599 106349787 -93280363 + L1PA6 LINE L1 2019 2206 -3940 9843 83 6 2 chr5 106349788 106351974 -93278176 + L1PA6 LINE L1 3989 6146 -8 947 192 61 14 chr5 106352941 106353155 -93276995 + MER58A DNA MER1_type 1 224 0 255 31 0 0 chr5 106354125 106354157 -93275993 + (TG)n Simple_repeat Simple_repeat 1 32 0 616 337 42 0 chr5 106354240 106354430 -93275720 + L2 LINE L2 1068 1265 -2049 270 335 95 13 chr5 106354434 106354592 -93275558 - L2 LINE L2 -1658 1656 1486 * 481 313 48 24 chr5 106354590 106354839 -93275311 + L2 LINE L2 1284 1538 -1776 2111 130 75 20 chr5 106354921 106355266 -93274884 - THE1B LTR MaLR 0 364 1 1412 247 3 3 chr5 106355408 106355712 -93274438 + MLT1A1 LTR MaLR 62 365 0 291 168 69 59 chr5 106355833 106355934 -93274216 + MER113 DNA MER1_type? 5 106 -415 1829 214 16 5 chr5 106356110 106356479 -93273671 + MLT2C1 LTR ERVL 17 389 -8 2010 140 10 3 chr5 106356932 106357239 -93272911 + AluSx SINE Alu 1 309 -3 498 256 8 16 chr5 106357251 106357380 -93272770 + HsTC2 DNA Tc2 1211 1338 -560 1287 156 4 72 chr5 106357381 106357799 -93272351 - L1M2 LINE L1 -743 5403 5078 1695 178 103 58 chr5 106357799 106358278 -93271872 + LTR10A LTR ERV1 1 548 -61 2612 234 25 3 chr5 106358291 106358944 -93271206 - L1M2 LINE L1 -1065 5081 4415 9997 132 67 18 chr5 106359112 106361190 -93268960 + L1P3 LINE L1 5 2177 -4284 669 131 0 0 chr5 106361191 106361298 -93268852 + L1PA7 LINE L1 6048 6154 0 322 317 12 49 chr5 106361357 106361521 -93268629 - L1MC/D LINE L1 -2149 5659 5502 2784 3 0 0 chr5 106361727 106362027 -93268123 + AluYa5 SINE Alu 1 300 -11 234 200 18 18 chr5 106362503 106362558 -93267592 + GA-rich Low_complexity Low_complexity 1 55 0 2164 125 6 10 chr5 106362676 106362988 -93267162 + AluSx SINE Alu 1 311 -1 1521 214 45 22 chr5 106364457 106364812 -93265338 + MLT1B LTR MaLR 25 387 -3 379 246 27 9 chr5 106365025 106365135 -93265015 - L1ME3A LINE L1 -15 6155 6044 498 210 86 43 chr5 106365272 106365551 -93264599 - L1M4 LINE L1 -1324 4822 4498 1491 154 68 17 chr5 106365566 106365859 -93264291 - L1PB4 LINE L1 -72 6084 5777 189 132 0 0 chr5 106365903 106365941 -93264209 + (CA)n Simple_repeat Simple_repeat 2 39 0 9688 119 20 2 chr5 106365974 106367377 -93262773 - THE1A-int LTR MaLR -151 1429 2 2189 126 22 25 chr5 106367378 106367734 -93262416 - THE1A LTR MaLR 0 355 1 1816 211 28 23 chr5 106367739 106368170 -93261980 - L1MD2 LINE L1 -282 6077 5645 30 0 0 0 chr5 106368189 106368219 -93261931 + AT_rich Low_complexity Low_complexity 1 30 0 723 275 108 46 chr5 106368444 106369685 -93260465 - L1ME3A LINE L1 -442 5728 4457 2594 146 40 47 chr5 106369788 106369831 -93260319 - Tigger3(Golem) DNA MER2_type -1 3027 2985 221 0 35 0 chr5 106369831 106369860 -93260290 + (CAGAT)n Simple_repeat Simple_repeat 4 33 0 2594 146 40 47 chr5 106369860 106370343 -93259807 - Tigger3(Golem) DNA MER2_type -43 2985 2505 1281 165 37 9 chr5 106370343 106370606 -93259544 - AluJb SINE Alu 0 328 60 1020 144 53 0 chr5 106370606 106370814 -93259336 - Tigger3(Golem) DNA MER2_type -530 2499 2281 425 272 39 0 chr5 106370811 106370914 -93259236 - Tigger3(Golem) DNA MER2_type -2921 108 2 * 1986 149 3 0 chr5 106370953 106371249 -93258901 - AluSx SINE Alu -15 297 1 26 30 0 0 chr5 106371439 106371472 -93258678 + AT_rich Low_complexity Low_complexity 1 33 0 1480 221 100 17 chr5 106371483 106371954 -93258196 - L1MC3 LINE L1 -23 7762 7253 25582 53 10 3 chr5 106371972 106376132 -93254018 - L1PA4 LINE L1 0 6549 2360 2022 133 0 26 chr5 106376132 106376440 -93253710 - AluSx SINE Alu -10 302 3 25582 53 10 3 chr5 106376440 106376597 -93253553 - L1PA4 LINE L1 -4189 2360 2206 945 233 33 4 chr5 106376595 106376870 -93253280 - L1MDa LINE L1 -4366 2591 2309 * 522 320 71 21 chr5 106376903 106377371 -93252779 - MLT1H LTR MaLR 0 549 1 6033 91 27 4 chr5 106378441 106379286 -93250864 - L1PA13 LINE L1 -5 6158 5334 228 35 0 0 chr5 106379286 106379315 -93250835 + (TG)n Simple_repeat Simple_repeat 2 30 0 6033 91 27 4 chr5 106379315 106380303 -93249847 - L1PA13 LINE L1 -829 5334 4294 2209 127 0 10 chr5 106382042 106382356 -93247794 - AluSx SINE Alu -1 311 1 7825 95 99 83 chr5 106382658 106384328 -93245822 - pTR5 LTR ERV1 0 2438 741 243 287 59 10 chr5 106386281 106386382 -93243768 + MIR SINE MIR 156 261 -1 4144 206 85 17 chr5 106386696 106387776 -93242374 - L1MDa LINE L1 -5221 1638 485 543 207 0 87 chr5 106387776 106387926 -93242224 + MLT1A1 LTR MaLR 1 137 -228 568 121 0 22 chr5 106387926 106388017 -93242133 - MER4A LTR ERV1 0 664 576 1193 139 10 51 chr5 106388117 106388405 -93241745 - MER4A LTR ERV1 -69 595 261 540 144 21 10 chr5 106388405 106388502 -93241648 - MER4A LTR ERV1 -566 98 1 * 906 210 68 14 chr5 106388502 106388720 -93241430 + MLT1A1 LTR MaLR 134 363 -2 1556 266 71 9 chr5 106388723 106389174 -93240976 - L1MDa LINE L1 -6371 488 10 4159 109 58 6 chr5 106389278 106389932 -93240218 - L1PA13 LINE L1 0 6163 5476 * 7136 47 0 0 chr5 106389927 106391072 -93239078 - L1PA6 LINE L1 0 6154 5002 1396 110 64 0 chr5 106391079 106391408 -93238742 - L1PA13 LINE L1 -698 5463 5119 519 283 69 17 chr5 106391419 106391592 -93238558 - MIR SINE MIR -71 191 10 658 314 52 4 chr5 106391599 106391828 -93238322 + MIR SINE MIR 23 262 0 422 256 107 0 chr5 106392164 106392285 -93237865 + HERV16 LTR ERVL 708 841 -4155 1324 243 111 14 chr5 106392286 106392710 -93237440 - MLT1D LTR MaLR 0 505 41 860 191 71 63 chr5 106392701 106392953 -93237197 + MLT1B LTR MaLR 121 374 -16 * 1554 171 151 3 chr5 106392953 106393298 -93236852 + MSTD LTR MaLR 1 396 0 932 305 49 33 chr5 106393658 106394048 -93236102 + LTR16A LTR ERVL 5 404 -46 2416 47 3 13 chr5 106394048 106394349 -93235801 + AluY SINE Alu 1 298 -13 932 305 49 33 chr5 106394349 106394387 -93235763 + LTR16A LTR ERVL 404 440 -10 37 23 0 0 chr5 106395239 106395283 -93234867 + AT_rich Low_complexity Low_complexity 1 44 0 740 171 47 0 chr5 106395363 106395533 -93234617 + L1MA8 LINE L1 6113 6290 -1 183 353 35 0 chr5 106396474 106396559 -93233591 - L2 LINE L2 0 3313 3226 294 355 128 25 chr5 106396593 106397059 -93233091 - L2 LINE L2 -162 3110 2590 184 344 13 84 chr5 106397186 106397340 -93232810 - L2 LINE L2 -1 3271 3129 389 250 0 0 chr5 106397784 106397868 -93232282 + L1PA15 LINE L1 4548 4631 -1515 5281 137 28 6 chr5 106397911 106398937 -93231213 + L1PA15 LINE L1 5120 6165 0 2123 78 0 0 chr5 106400265 106400548 -93229602 + L1PA14 LINE L1 5870 6152 -9 671 96 0 0 chr5 106400792 106400886 -93229264 - AluY SINE Alu -12 299 206 1588 36 0 0 chr5 106401367 106401561 -93228589 - L1PA4 LINE L1 0 6155 5962 528 105 42 0 chr5 106401808 106401903 -93228247 + L1PA14 LINE L1 6054 6152 -9 671 96 0 0 chr5 106402151 106402245 -93227905 - AluY SINE Alu -12 299 206 1558 36 0 5 chr5 106402726 106402921 -93227229 - L1PA4 LINE L1 0 6155 5962 279 122 0 0 chr5 106403130 106403179 -93226971 + (T)n Simple_repeat Simple_repeat 1 49 0 12201 19 0 0 chr5 106403180 106405447 -93224703 - L1HS LINE L1 -3 6152 3886 16446 20 0 0 chr5 106405547 106408103 -93222047 - L1HS LINE L1 -229 5926 3370 24659 29 1 0 chr5 106408203 106411311 -93218839 + L1P LINE L1 1973 5083 -1063 3089 14 3 0 chr5 106411309 106411680 -93218470 + L1HS LINE L1 5784 6155 0 * 315 0 0 0 chr5 106411682 106411717 -93218433 + (A)n Simple_repeat Simple_repeat 1 35 0 6171 156 14 14 chr5 106411717 106412903 -93217247 - L1P LINE L1 -4115 2031 847 26801 42 41 4 chr5 106413003 106416645 -93213505 - L1P LINE L1 -2371 3775 1 631 122 0 0 chr5 106416860 106416950 -93213200 + 5S rRNA rRNA 1 90 -31 538 305 47 37 chr5 106418454 106418861 -93211289 + L1MCc LINE L1 20 430 -5993 898 221 37 55 chr5 106419038 106419501 -93210649 + L1MC/D LINE L1 5124 5570 -746 6162 181 52 41 chr5 106419558 106419975 -93210175 + L1MCc LINE L1 536 947 -5994 1920 121 3 31 chr5 106419975 106420265 -93209885 + AluSp SINE Alu 1 282 -31 6162 181 52 41 chr5 106420265 106420292 -93209858 + L1MCc LINE L1 947 972 -5969 261 83 0 0 chr5 106420292 106420328 -93209822 + (CA)n Simple_repeat Simple_repeat 2 37 0 6162 181 52 41 chr5 106420328 106421399 -93208751 + L1MCc LINE L1 972 2069 -4872 * 6621 221 37 72 chr5 106421395 106423385 -93206765 + L1MCc LINE L1 3001 4877 -2064 2253 137 8 3 chr5 106423385 106423742 -93206408 - L1PB2 LINE L1 -2 6149 5791 6621 221 37 72 chr5 106423742 106424412 -93205738 + L1MCc LINE L1 4877 5569 -1372 1175 219 26 69 chr5 106424430 106424850 -93205300 + L1MA9 LINE L1 5873 6274 -38 545 269 25 10 chr5 106424868 106425065 -93205085 + L1MC4 LINE L1 7251 7450 -592 274 298 14 7 chr5 106425064 106425205 -93204945 + L1MC4 LINE L1 7751 7892 -150 * 23 33 0 0 chr5 106425244 106425274 -93204876 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 106425391 106425413 -93204737 + AT_rich Low_complexity Low_complexity 1 22 0 21 82 0 0 chr5 106425540 106425589 -93204561 + AT_rich Low_complexity Low_complexity 1 49 0 197 174 0 22 chr5 106426136 106426182 -93203968 + GA-rich Low_complexity Low_complexity 4 48 0 303 214 43 57 chr5 106427152 106427292 -93202858 + MER113 DNA MER1_type? 9 146 -375 2241 120 0 0 chr5 106427293 106427594 -93202556 + AluSx SINE Alu 1 301 -11 275 299 73 34 chr5 106427772 106427949 -93202201 + MIR SINE MIR 78 261 -1 21 57 0 0 chr5 106428077 106428112 -93202038 + AT_rich Low_complexity Low_complexity 1 35 0 1569 236 109 7 chr5 106429075 106429533 -93200617 - MLT1D LTR MaLR 0 505 1 304 255 85 21 chr5 106429757 106429851 -93200299 - MIR SINE MIR -162 100 1 224 296 0 0 chr5 106430052 106430106 -93200044 + GA-rich Low_complexity Low_complexity 1 54 0 622 316 50 24 chr5 106430198 106430405 -93199745 - HERV16 LTR ERVL -3027 1969 1750 2703 76 3 3 chr5 106430405 106430760 -93199390 - THE1A LTR MaLR 0 355 1 622 316 50 24 chr5 106430760 106430849 -93199301 - HERV16 LTR ERVL -3246 1750 1665 240 228 43 33 chr5 106431108 106431200 -93198950 + L1MC4a LINE L1 7728 7807 -1 1958 149 23 13 chr5 106431530 106431839 -93198311 + AluSx SINE Alu 1 312 0 510 167 0 0 chr5 106432475 106432559 -93197591 + AluJb SINE Alu 205 288 -24 1231 259 21 9 chr5 106432560 106432892 -93197258 - MER63B DNA MER1_type -100 336 1 1503 191 118 21 chr5 106432977 106433359 -93196791 - L1PA12 LINE L1 -7087 494 76 * 8858 37 0 0 chr5 106433358 106434477 -93195673 - L1PA5 LINE L1 -2661 3485 2367 15346 46 9 1 chr5 106434477 106437144 -93193006 + L1PA5 LINE L1 3473 6147 -7 231 188 0 0 chr5 106437165 106437213 -93192937 + (TA)n Simple_repeat Simple_repeat 2 49 0 262 311 0 0 chr5 106437271 106437345 -93192805 - L1MCa LINE L1 -4570 1856 1783 428 195 0 12 chr5 106437373 106437455 -93192695 - L1PA12 LINE L1 -7492 89 9 539 72 0 36 chr5 106439230 106439313 -93190837 - MADE1 DNA Mariner 0 80 1 744 226 13 74 chr5 106439395 106439625 -93190525 + MLT1A1 LTR MaLR 13 228 -137 16421 176 37 13 chr5 106439625 106442689 -93187461 + L1M1 LINE L1 27 3163 -4402 3828 226 48 12 chr5 106442697 106443704 -93186446 + L1M1 LINE L1 3604 4646 -2919 623 224 103 32 chr5 106443704 106443860 -93186290 + MLT1A1 LTR MaLR 206 372 -2 325 289 217 7 chr5 106444369 106444521 -93185629 + MIR3 SINE MIR 19 202 -6 599 251 73 24 chr5 106445410 106445713 -93184437 + L1ME2 LINE L1 5834 6164 0 5466 278 41 11 chr5 106445800 106446929 -93183221 + L1M4b LINE L1 12 1200 -5659 1593 219 64 0 chr5 106446929 106447272 -93182878 + MLT1A1 LTR MaLR 1 365 0 5466 278 41 11 chr5 106447272 106447647 -93182503 + L1M4b LINE L1 1200 1562 -5297 1030 195 49 146 chr5 106447667 106448057 -93182093 + LTR28 LTR ERV1 395 745 -81 22 35 0 0 chr5 106448416 106448445 -93181705 + AT_rich Low_complexity Low_complexity 1 29 0 4487 51 50 2 chr5 106448479 106449461 -93180689 + MER11A LTR ERVK 1 1266 0 24 32 0 0 chr5 106450969 106451000 -93179150 + AT_rich Low_complexity Low_complexity 1 31 0 2598 168 65 8 chr5 106451496 106452020 -93178130 + L1MB4 LINE L1 5589 6142 -38 200 275 0 14 chr5 106452328 106452397 -93177753 + GA-rich Low_complexity Low_complexity 1 68 0 187 250 0 0 chr5 106452555 106452595 -93177555 - L2 LINE L2 -1 3312 3273 22 0 0 0 chr5 106453058 106453080 -93177070 + AT_rich Low_complexity Low_complexity 1 22 0 2652 83 17 0 chr5 106454394 106454743 -93175407 + THE1A LTR MaLR 1 355 0 6567 100 26 2 chr5 106454743 106455664 -93174486 + THE1A-int LTR MaLR 1 943 -637 1581 88 42 0 chr5 106455668 106455883 -93174267 + THE1A LTR MaLR 132 355 0 21 36 0 0 chr5 106456409 106456437 -93173713 + AT_rich Low_complexity Low_complexity 1 28 0 548 259 62 19 chr5 106457447 106457772 -93172378 + L1ME LINE L1 520 858 -5212 280 289 0 13 chr5 106457780 106457856 -93172294 + L1PA13 LINE L1 884 958 -6616 465 323 22 9 chr5 106457896 106458218 -93171932 + L1PA13 LINE L1 2177 2440 -5141 2376 216 29 16 chr5 106458218 106458731 -93171419 + L1M4 LINE L1 22 541 -7024 657 223 18 6 chr5 106458715 106458881 -93171269 + L1ME LINE L1 2391 2558 -3522 * 376 211 211 0 chr5 106458887 106459048 -93171102 + L1M4 LINE L1 3749 3943 -3622 398 391 52 42 chr5 106462066 106462373 -93167777 - L2 LINE L2 -4 3268 2959 447 332 40 35 chr5 106462437 106462636 -93167514 - L2 LINE L2 -494 2820 2621 16405 215 29 20 chr5 106463232 106464014 -93166136 - L1PA15 LINE L1 -5 6820 6047 1678 94 0 0 chr5 106464014 106464226 -93165924 + AluSg/x SINE Alu 84 295 -15 16405 215 29 20 chr5 106464226 106466049 -93164101 - L1PA15 LINE L1 -778 6047 4242 1927 131 87 32 chr5 106466049 106466393 -93163757 + THE1B LTR MaLR 2 364 0 16405 215 29 20 chr5 106466393 106468918 -93161232 - L1PA15 LINE L1 -2583 4242 1534 2060 151 3 0 chr5 106468918 106469223 -93160927 - AluSg SINE Alu -4 306 1 16405 215 29 20 chr5 106469223 106470771 -93159379 - L1PA15 LINE L1 -5291 1534 2 32 26 0 0 chr5 106472307 106472346 -93157804 + AT_rich Low_complexity Low_complexity 1 39 0 872 250 42 9 chr5 106472825 106473041 -93157109 - MLT1J2 LTR MaLR -226 224 2 22 88 0 0 chr5 106473515 106473572 -93156578 + AT_rich Low_complexity Low_complexity 1 57 0 381 260 41 7 chr5 106474580 106474726 -93155424 - MER103 DNA DNA -8 158 8 267 296 84 21 chr5 106475127 106475269 -93154881 + MIR SINE MIR 99 249 -13 21 0 0 0 chr5 106475771 106475792 -93154358 + AT_rich Low_complexity Low_complexity 1 21 0 776 178 7 13 chr5 106477423 106477575 -93152575 - L1PA16 LINE L1 -4 6162 6012 207 0 0 0 chr5 106479181 106479204 -93150946 + (T)n Simple_repeat Simple_repeat 1 23 0 243 272 25 49 chr5 106479400 106479481 -93150669 + L2 LINE L2 3231 3309 -4 347 307 0 0 chr5 106481291 106481379 -93148771 + CT-rich Low_complexity Low_complexity 3 90 0 3429 141 9 2 chr5 106481627 106482188 -93147962 + MER34B LTR ERV1 1 565 0 1042 216 112 54 chr5 106482413 106483074 -93147076 - LTR41 LTR ERVL -9 764 1 34 24 0 0 chr5 106484653 106484694 -93145456 + AT_rich Low_complexity Low_complexity 1 41 0 255 250 13 22 chr5 106485773 106485875 -93144275 - MLT1K LTR MaLR -28 587 482 4661 159 37 35 chr5 106485876 106486744 -93143406 - MER52A LTR ERV1 0 1755 886 1477 156 17 0 chr5 106486846 106487077 -93143073 + Tigger2 DNA MER2_type 2484 2718 0 24 0 0 0 chr5 106487077 106487101 -93143049 + AT_rich Low_complexity Low_complexity 1 24 0 1017 263 50 18 chr5 106487553 106487831 -93142319 + Charlie1a DNA MER1_type 1 287 -1168 225 250 0 0 chr5 106487833 106487885 -93142265 + FLAM SINE Alu 82 133 0 3658 170 31 6 chr5 106487991 106488895 -93141255 - L1PA12 LINE L1 -4177 3407 2478 2465 199 4 2 chr5 106488892 106489389 -93140761 + L1P LINE L1 3974 4471 -1675 * 2957 242 64 15 chr5 106489489 106490627 -93139523 - L1PBb LINE L1 -4331 1872 583 580 271 20 68 chr5 106491816 106492067 -93138083 - MIR SINE MIR -20 242 4 289 254 154 31 chr5 106492797 106492927 -93137223 + MER69 DNA AcHobo 1 146 -1080 233 197 239 14 chr5 106493387 106493458 -93136692 - L1ME3A LINE L1 -5 6165 6079 398 295 142 21 chr5 106493583 106493773 -93136377 + L3 LINE CR1 486 698 -879 2269 166 7 22 chr5 106494147 106494594 -93135556 + L1MA7 LINE L1 5852 6291 0 2652 179 9 51 chr5 106494828 106495381 -93134769 - MER52A LTR ERV1 0 1755 1226 30 27 0 0 chr5 106496128 106496165 -93133985 + AT_rich Low_complexity Low_complexity 1 37 0 690 234 7 0 chr5 106496301 106496455 -93133695 - L1 LINE L1 -1355 4791 4637 222 297 178 10 chr5 106496455 106496556 -93133594 - MIR SINE MIR -142 120 3 439 341 71 0 chr5 106496946 106497128 -93133022 - MIR SINE MIR -31 231 37 241 152 0 0 chr5 106497247 106497293 -93132857 + LTR66 LTR ERVL 394 439 -171 261 244 24 0 chr5 106497293 106497375 -93132775 + L1MC4 LINE L1 6620 6703 -1339 2069 236 34 6 chr5 106497455 106497993 -93132157 - L1MA10 LINE L1 0 6334 5782 312 269 39 19 chr5 106498004 106498108 -93132042 + L1MC4 LINE L1 6614 6719 -1323 312 109 0 55 chr5 106498108 106498163 -93131987 - L1M3 LINE L1 -375 5793 5742 8323 193 33 8 chr5 106498180 106500153 -93129997 + L1M2 LINE L1 3486 5508 -757 1708 320 80 7 chr5 106500593 106501331 -93128819 - L2 LINE L2 -511 2803 2012 1269 190 93 11 chr5 106501480 106501749 -93128401 + AluJo SINE Alu 1 291 -11 437 321 67 53 chr5 106502991 106503666 -93126484 + PABL_B-int LTR ERV1 3506 4077 -3045 648 355 107 23 chr5 106506681 106507534 -93122616 + L2 LINE L2 2388 3312 -1 299 256 68 30 chr5 106507535 106507668 -93122482 + MIR SINE MIR 125 262 0 2184 112 25 33 chr5 106509036 106509403 -93120747 - THE1B LTR MaLR 0 364 1 222 417 46 20 chr5 106509510 106509661 -93120489 - L2 LINE L2 -17 3255 3101 254 341 22 11 chr5 106509682 106509773 -93120377 + MER5B DNA MER1_type 11 102 -76 1434 174 4 0 chr5 106509884 106510131 -93120019 + L1M2 LINE L1 5518 5765 -526 24 0 0 0 chr5 106511215 106511239 -93118911 + AT_rich Low_complexity Low_complexity 1 24 0 1951 130 17 7 chr5 106512127 106512419 -93117731 - AluSg SINE Alu -15 295 1 230 54 0 27 chr5 106513048 106513085 -93117065 + (TTTTA)n Simple_repeat Simple_repeat 1 36 0 3814 31 0 0 chr5 106513085 106513358 -93116792 - L1PA4 LINE L1 -24 6131 5859 602 275 46 0 chr5 106513358 106513576 -93116574 - L1MD3 LINE L1 -2137 5858 5631 5516 195 35 6 chr5 106515258 106516693 -93113457 - L1MC1 LINE L1 0 6333 4858 270 0 0 0 chr5 106517012 106517042 -93113108 + (TG)n Simple_repeat Simple_repeat 2 31 0 43 0 0 0 chr5 106517070 106517113 -93113037 + AT_rich Low_complexity Low_complexity 1 43 0 2154 102 0 13 chr5 106517724 106518027 -93112123 + AluSg SINE Alu 1 299 -11 9955 156 29 28 chr5 106518497 106520297 -93109853 - Tigger2 DNA MER2_type 0 2718 917 1663 148 33 7 chr5 106520294 106520564 -93109586 + Tigger2 DNA MER2_type 468 744 -1974 * 244 349 142 0 chr5 106521215 106521321 -93108829 + MIR3 SINE MIR 70 190 -18 730 82 0 0 chr5 106522463 106522561 -93107589 + L1PB3 LINE L1 6052 6149 -5 570 195 16 0 chr5 106522563 106522691 -93107459 - L1 LINE L1 -844 5302 5173 4112 106 48 3 chr5 106522696 106523346 -93106804 + L1PB2 LINE L1 5467 6145 -6 187 359 20 23 chr5 106523470 106523604 -93106546 + MER5B DNA MER1_type 20 163 -26 319 296 72 36 chr5 106524057 106524280 -93105870 + L2 LINE L2 3013 3243 -70 1379 163 14 0 chr5 106524581 106524827 -93105323 + AluSx SINE Alu 58 306 0 2423 117 0 9 chr5 106524831 106525174 -93104976 - THE1C LTR MaLR -35 340 1 864 232 18 14 chr5 106525976 106526196 -93103954 + L1ME LINE L1 3616 3836 -2310 * 1096 173 76 50 chr5 106526192 106526269 -93103881 + L1ME LINE L1 5378 5452 -714 2473 48 0 13 chr5 106526269 106526581 -93103569 + AluY SINE Alu 1 308 -3 1096 173 76 50 chr5 106526581 106526780 -93103370 + L1ME LINE L1 5452 5661 -505 215 301 39 58 chr5 106526896 106526999 -93103151 - MIR SINE MIR -105 157 57 484 217 25 0 chr5 106527215 106527335 -93102815 - L1MC3 LINE L1 -8 7777 7655 268 274 128 0 chr5 106527360 106527477 -93102673 - L1MCb LINE L1 -5344 701 570 855 296 73 53 chr5 106527558 106528105 -93102045 - L1MCb LINE L1 -5482 563 6 354 296 53 26 chr5 106528135 106528287 -93101863 - L2 LINE L2 0 3313 3158 1163 130 40 85 chr5 106528535 106528758 -93101392 + AluJo SINE Alu 82 294 -18 3700 221 75 23 chr5 106528758 106529878 -93100272 + Charlie1a DNA MER1_type 276 1453 -2 185 290 81 16 chr5 106529911 106529973 -93100177 + L2 LINE L2 2608 2673 -641 192 143 0 0 chr5 106531012 106531040 -93099110 - L3 LINE CR1 -324 1253 1226 198 103 0 0 chr5 106532203 106532232 -93097918 + (T)n Simple_repeat Simple_repeat 1 29 0 1519 217 111 10 chr5 106532377 106532792 -93097358 - MER31B LTR ERV1 -9 457 1 22 0 0 0 chr5 106532944 106532966 -93097184 + AT_rich Low_complexity Low_complexity 1 22 0 267 240 0 39 chr5 106533997 106534126 -93096024 + GA-rich Low_complexity Low_complexity 2 125 0 216 170 0 64 chr5 106534330 106534377 -93095773 + polypyrimidine Low_complexity Low_complexity 1 44 0 713 231 21 29 chr5 106535415 106535657 -93094493 - L1MB5 LINE L1 -229 5945 5706 410 239 80 46 chr5 106535457 106535695 -93094455 - L1PB2 LINE L1 -253 5898 5653 * 22 35 0 0 chr5 106536093 106536122 -93094028 + AT_rich Low_complexity Low_complexity 1 29 0 1700 184 6 0 chr5 106537131 106537447 -93092703 - L1MB1 LINE L1 -20 6148 5831 3000 183 5 38 chr5 106537522 106538328 -93091822 - L1MB1 LINE L1 -324 5844 5063 1081 202 40 0 chr5 106538428 106538681 -93091469 + L1 LINE L1 4263 4525 -1621 23 0 0 0 chr5 106539284 106539307 -93090843 + AT_rich Low_complexity Low_complexity 1 23 0 209 388 31 10 chr5 106540196 106540294 -93089856 + L2 LINE L2 2559 2658 -656 587 311 79 53 chr5 106540614 106541070 -93089080 - MLT1H LTR MaLR 0 549 82 270 225 36 27 chr5 106541083 106541194 -93088956 - L1MB1 LINE L1 -2722 3424 3313 250 282 0 0 chr5 106542064 106542142 -93088008 + L1MC4 LINE L1 6615 6692 -1350 23 33 0 0 chr5 106542160 106542190 -93087960 + AT_rich Low_complexity Low_complexity 1 30 0 52 41 0 0 chr5 106542219 106542292 -93087858 + AT_rich Low_complexity Low_complexity 1 73 0 198 307 13 13 chr5 106542864 106542939 -93087211 - L2 LINE L2 -19 3294 3220 596 251 0 37 chr5 106542956 106543119 -93087031 - L2 LINE L2 -1023 2291 2135 1874 317 116 5 chr5 106543127 106543984 -93086166 - L2 LINE L2 -2331 983 32 267 276 231 30 chr5 106544401 106544535 -93085615 - MER5A DNA MER1_type 0 189 29 186 43 0 0 chr5 106545100 106545123 -93085027 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 232 232 0 53 chr5 106545399 106545494 -93084656 + L1MC4 LINE L1 6614 6703 -1339 945 179 6 6 chr5 106545558 106545731 -93084419 - FRAM SINE Alu -10 166 1 229 328 0 0 chr5 106545835 106545902 -93084248 - L1 LINE L1 -2004 4142 4076 28 0 0 0 chr5 106545922 106545950 -93084200 + AT_rich Low_complexity Low_complexity 1 28 0 261 0 0 0 chr5 106546188 106546217 -93083933 + (TG)n Simple_repeat Simple_repeat 1 29 0 445 354 33 69 chr5 106546515 106546877 -93083273 - MLT1K LTR MaLR 0 588 240 256 212 15 15 chr5 106547002 106547068 -93083082 + A-rich Low_complexity Low_complexity 4 69 0 288 172 0 0 chr5 106547281 106547339 -93082811 + (CA)n Simple_repeat Simple_repeat 1 58 0 543 170 0 16 chr5 106548349 106548747 -93081403 + (TA)n Simple_repeat Simple_repeat 1 391 0 301 264 47 38 chr5 106548747 106548853 -93081297 - L1MC4 LINE L1 -1323 6719 6613 * 357 276 26 35 chr5 106548758 106548874 -93081276 + L1MC4 LINE L1 6614 6728 -1314 2025 129 7 0 chr5 106549142 106549444 -93080706 - AluSx SINE Alu -5 307 4 369 0 0 0 chr5 106550781 106550822 -93079328 + (TG)n Simple_repeat Simple_repeat 2 42 0 24 0 0 0 chr5 106550828 106550852 -93079298 + AT_rich Low_complexity Low_complexity 1 24 0 42 20 0 0 chr5 106550899 106550948 -93079202 + AT_rich Low_complexity Low_complexity 1 49 0 1908 120 57 0 chr5 106551029 106551312 -93078838 + AluSc SINE Alu 1 299 -10 22 70 0 0 chr5 106551863 106551906 -93078244 + AT_rich Low_complexity Low_complexity 1 43 0 9511 83 4 26 chr5 106551906 106553827 -93076323 - L1PA7 LINE L1 -13 6141 4252 2194 125 3 0 chr5 106553827 106554139 -93076011 - AluSp SINE Alu 0 313 1 9511 83 4 26 chr5 106554139 106554360 -93075790 - L1PA7 LINE L1 -1902 4252 4028 22 56 0 0 chr5 106554657 106554693 -93075457 + AT_rich Low_complexity Low_complexity 1 36 0 3277 106 4 2 chr5 106554990 106555481 -93074669 - L1PA7 LINE L1 -2119 4027 3536 4299 168 56 26 chr5 106557261 106558140 -93072010 - L1MA9 LINE L1 -7 6305 5401 1005 237 22 9 chr5 106559703 106559935 -93070215 + L1MC1 LINE L1 6099 6333 0 23 0 0 0 chr5 106560020 106560043 -93070107 + AT_rich Low_complexity Low_complexity 1 23 0 530 269 34 23 chr5 106560414 106560589 -93069561 - MIR SINE MIR -18 244 68 306 0 0 0 chr5 106560615 106560649 -93069501 + (TA)n Simple_repeat Simple_repeat 2 35 0 240 100 0 0 chr5 106560990 106561030 -93069120 + (TC)n Simple_repeat Simple_repeat 1 40 0 2524 49 10 0 chr5 106561145 106561451 -93068699 - AluY SINE Alu -2 309 1 210 237 26 13 chr5 106561608 106561684 -93068466 + (TA)n Simple_repeat Simple_repeat 2 78 0 240 232 18 0 chr5 106561825 106561881 -93068269 + MER34 LTR ERV1 3 59 -483 196 233 70 47 chr5 106561951 106562037 -93068113 - MER5C DNA MER1_type -1 323 236 1104 212 73 25 chr5 106562376 106562405 -93067745 - MSTB1 LTR MaLR 0 432 406 1792 150 11 75 chr5 106562405 106562765 -93067385 + MER1B DNA MER1_type 1 337 0 1104 212 73 25 chr5 106562765 106563009 -93067141 - MSTB1 LTR MaLR -26 406 146 265 320 10 58 chr5 106562998 106563101 -93067049 + MLT1G LTR MaLR 193 290 -300 * 22 56 0 0 chr5 106563677 106563713 -93066437 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 106563851 106563872 -93066278 + AT_rich Low_complexity Low_complexity 1 21 0 219 69 0 0 chr5 106564977 106565006 -93065144 + (CA)n Simple_repeat Simple_repeat 2 30 0 2234 278 39 16 chr5 106565038 106565776 -93064374 + Charlie1a DNA MER1_type 1 755 -700 2169 122 28 22 chr5 106566649 106567011 -93063139 - THE1B LTR MaLR 0 364 1 22 35 0 0 chr5 106567722 106567751 -93062399 + AT_rich Low_complexity Low_complexity 1 29 0 1606 248 23 44 chr5 106567788 106568216 -93061934 + MLT1E2 LTR MaLR 2 420 -206 4378 63 3 0 chr5 106568320 106568888 -93061262 + L1PA7 LINE L1 5585 6154 0 188 342 40 0 chr5 106570742 106570818 -93059332 + L2 LINE L2 3000 3078 -235 1581 209 40 8 chr5 106570991 106571345 -93058805 - MLT1A1 LTR MaLR 0 365 1 26 50 0 0 chr5 106571553 106571593 -93058557 + AT_rich Low_complexity Low_complexity 1 40 0 200 229 0 0 chr5 106571721 106571756 -93058394 - MIR SINE MIR -16 246 212 827 197 134 36 chr5 106571994 106572217 -93057933 - AluJo SINE Alu -67 245 1 6317 127 133 116 chr5 106573181 106574848 -93055302 + pTR5 LTR ERV1 743 2438 0 30 59 0 0 chr5 106575452 106575503 -93054647 + AT_rich Low_complexity Low_complexity 1 51 0 240 241 0 81 chr5 106575680 106575767 -93054383 - LTR33A LTR ERVL -23 500 421 180 186 159 88 chr5 106575769 106575882 -93054268 - L2 LINE L2 -1277 2037 1917 2729 195 25 60 chr5 106576421 106577155 -93052995 + MER67C LTR ERV1 3 710 0 188 125 62 0 chr5 106577299 106577363 -93052787 + (TA)n Simple_repeat Simple_repeat 1 68 0 3934 139 17 16 chr5 106577415 106578060 -93052090 - MER39B LTR ERV1 -2 651 6 30 27 0 0 chr5 106578368 106578405 -93051745 + AT_rich Low_complexity Low_complexity 1 37 0 32 67 0 0 chr5 106578506 106578566 -93051584 + AT_rich Low_complexity Low_complexity 1 60 0 1817 164 0 7 chr5 106579443 106579756 -93050394 - AluSx SINE Alu 0 311 1 1616 231 27 8 chr5 106579868 106580240 -93049910 + MER57B LTR ERV1 1 379 -55 6144 70 6 16 chr5 106580261 106581073 -93049077 + HERVL-A1 LTR ERVL 4851 5654 0 2765 96 3 8 chr5 106581073 106581459 -93048691 + MLT2A1 LTR ERVL 1 384 -60 424 17 50 0 chr5 106581460 106581520 -93048630 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 199 113 38 0 chr5 106581540 106581593 -93048557 + (TA)n Simple_repeat Simple_repeat 1 55 0 411 73 0 0 chr5 106581634 106581689 -93048461 + MLT2A1 LTR ERVL 399 453 0 754 352 25 16 chr5 106581858 106582420 -93047730 + PABL_B-int LTR ERV1 2571 3137 -3985 300 143 0 0 chr5 106582585 106582634 -93047516 + MLT1E2 LTR MaLR 576 624 -2 254 378 7 40 chr5 106584309 106584460 -93045690 - L2 LINE L2 -22 3291 3146 711 82 20 0 chr5 106585522 106585620 -93044530 - L1PA13 LINE L1 -19 6144 6045 303 93 0 0 chr5 106585692 106585706 -93044444 + (CA)n Simple_repeat Simple_repeat 1 57 0 303 93 0 0 chr5 106585706 106585749 -93044401 + (CA)n Simple_repeat Simple_repeat 2 44 0 4211 96 30 2 chr5 106585884 106586489 -93043661 - L1PA14 LINE L1 -2 6159 5538 289 296 0 11 chr5 106587523 106587611 -93042539 - MIR SINE MIR -115 147 61 295 307 97 40 chr5 106587825 106588001 -93042149 - MIR SINE MIR -12 250 65 792 284 85 16 chr5 106588128 106588491 -93041659 + L1MC4 LINE L1 7494 7881 -161 31256 109 12 62 chr5 106588609 106592915 -93037235 - L1PA7 LINE L1 0 6154 2278 512 44 0 0 chr5 106592915 106592983 -93037167 - L1PA2 LINE L1 0 6155 6088 31256 109 12 62 chr5 106592983 106595144 -93035006 - L1PA7 LINE L1 -3876 2278 12 221 348 121 14 chr5 106595508 106595649 -93034501 - MER5A DNA MER1_type 0 189 34 189 171 0 0 chr5 106595868 106595903 -93034247 + (CA)n Simple_repeat Simple_repeat 2 36 0 1875 169 79 105 chr5 106595990 106596457 -93033693 - MLT2B2 LTR ERVL -60 455 1 22 70 0 0 chr5 106597416 106597459 -93032691 + AT_rich Low_complexity Low_complexity 1 43 0 279 0 0 0 chr5 106598243 106598274 -93031876 + (CA)n Simple_repeat Simple_repeat 2 32 0 267 31 0 0 chr5 106598273 106598305 -93031845 + (TA)n Simple_repeat Simple_repeat 2 33 0 * 1204 196 4 31 chr5 106598314 106598574 -93031576 - AluJo SINE Alu -45 267 15 260 280 0 13 chr5 106598618 106598693 -93031457 + L2 LINE L2 1708 1781 -1533 346 115 67 39 chr5 106598836 106598940 -93031210 + CT-rich Low_complexity Low_complexity 4 110 0 25 51 0 0 chr5 106599716 106599755 -93030395 + AT_rich Low_complexity Low_complexity 1 39 0 29 47 0 0 chr5 106600060 106600103 -93030047 + AT_rich Low_complexity Low_complexity 1 43 0 309 165 130 35 chr5 106600234 106600349 -93029801 - L1MB8 LINE L1 -3 6175 6050 391 267 79 0 chr5 106600356 106600457 -93029693 - MER81 DNA DNA -5 109 1 309 220 120 20 chr5 106600500 106600600 -93029550 - L1M4 LINE L1 -1624 4522 4413 2536 58 0 0 chr5 106601233 106601541 -93028609 - AluY SINE Alu -3 308 1 18069 53 2 10 chr5 106652710 106655103 -92975047 - L1P LINE L1 -1766 4380 2008 14753 86 7 0 chr5 106655106 106657079 -92973071 + L1P LINE L1 1 1987 -4159 180 194 0 0 chr5 106657093 106657124 -92973026 - MIR SINE MIR -114 94 64 1444 207 136 16 chr5 106657178 106657560 -92972590 - MSTA LTR MaLR 0 428 1 2365 181 11 24 chr5 106657988 106658457 -92971693 + MLT1C LTR MaLR 5 467 0 2208 99 0 7 chr5 106659409 106659711 -92970439 + AluSq SINE Alu 1 300 -13 292 143 0 0 chr5 106660753 106660795 -92969355 + MER52-int LTR ERV1 4843 4884 -2207 4500 258 19 12 chr5 106660837 106662049 -92968101 - MER61D-int LTR ERV1 -5747 1249 29 682 235 39 9 chr5 106662062 106662269 -92967881 - MER61D LTR ERV1 -18 750 338 514 298 0 0 chr5 106663544 106663685 -92966465 - L2 LINE L2 0 3313 3173 375 210 116 29 chr5 106663685 106663823 -92966327 - L1MCa LINE L1 -4979 1447 1298 5346 209 18 32 chr5 106663833 106665329 -92964821 + L1PA13 LINE L1 1169 2660 -4137 5765 140 9 15 chr5 106665347 106666414 -92963736 + L1PA15 LINE L1 5104 6165 0 653 278 106 27 chr5 106666597 106666967 -92963183 + L1M4 LINE L1 4219 4643 -1503 378 0 0 0 chr5 106666967 106667009 -92963141 + (TA)n Simple_repeat Simple_repeat 1 42 0 653 278 106 27 chr5 106667009 106667156 -92962994 + L1M4 LINE L1 4643 4777 -1369 276 302 10 0 chr5 106667188 106667284 -92962866 + L1M4 LINE L1 4842 4938 -1208 539 237 68 23 chr5 106667341 106667560 -92962590 + L1M4 LINE L1 5164 5392 -754 * 3240 189 52 80 chr5 106667544 106667741 -92962409 + L1MB8 LINE L1 5188 5389 -789 2394 85 0 0 chr5 106667741 106668046 -92962104 + AluY SINE Alu 1 305 -6 3240 189 52 80 chr5 106668046 106668890 -92961260 + L1MB8 LINE L1 5389 6177 -1 389 274 34 0 chr5 106668908 106669025 -92961125 + L1ME1 LINE L1 6010 6130 -36 811 320 103 16 chr5 106669404 106669829 -92960321 + L2 LINE L2 209 670 -2644 678 259 95 48 chr5 106670390 106670769 -92959381 + L1ME3 LINE L1 4754 5150 -996 1394 273 117 25 chr5 106670788 106671452 -92958698 + L1ME3 LINE L1 5255 5981 -181 5687 223 50 19 chr5 106671455 106672338 -92957812 - L1 LINE L1 -1672 4474 3518 1600 203 0 7 chr5 106672338 106672638 -92957512 - AluJo SINE Alu -10 302 5 5687 223 50 19 chr5 106672638 106673363 -92956787 - L1 LINE L1 -2628 3518 2817 1898 212 26 2 chr5 106673366 106673790 -92956360 + L1MB1 LINE L1 4479 4912 -1234 431 125 9 45 chr5 106673818 106673930 -92956220 + (TA)n Simple_repeat Simple_repeat 1 108 0 1638 211 18 20 chr5 106673935 106674328 -92955822 + L1MB1 LINE L1 5771 6162 -6 211 216 0 0 chr5 106674514 106674551 -92955599 + (TATG)n Simple_repeat Simple_repeat 4 40 0 22 56 0 0 chr5 106674673 106674709 -92955441 + AT_rich Low_complexity Low_complexity 1 36 0 1596 208 69 10 chr5 106674710 106675118 -92955032 - L1MC/D LINE L1 -466 5845 5414 1336 237 75 71 chr5 106675114 106675637 -92954513 + L1MD2 LINE L1 5816 6340 -19 * 29 70 0 0 chr5 106676301 106676358 -92953792 + AT_rich Low_complexity Low_complexity 1 57 0 348 64 0 0 chr5 106676597 106676644 -92953506 + (TA)n Simple_repeat Simple_repeat 2 48 0 1132 277 40 44 chr5 106677102 106677827 -92952323 - L1MC/D LINE L1 -2400 3815 3094 35 54 0 0 chr5 106678064 106678120 -92952030 + AT_rich Low_complexity Low_complexity 1 56 0 13020 59 2 6 chr5 106678447 106680135 -92950015 - L1PA4 LINE L1 -3771 2375 694 24143 39 2 0 chr5 106680135 106683916 -92946234 + L1PA4 LINE L1 2360 6153 -2 335 345 36 31 chr5 106683932 106684126 -92946024 + L1ME LINE L1 5508 5702 -419 536 242 86 19 chr5 106684293 106684549 -92945601 + L1M4 LINE L1 2110 2382 -3764 202 296 42 14 chr5 106684937 106685008 -92945142 + L2 LINE L2 3241 3313 0 252 184 0 0 chr5 106686068 106686117 -92944033 - L1MB8 LINE L1 0 6178 6130 198 143 0 0 chr5 106687177 106687212 -92942938 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 461 368 83 64 chr5 106687216 106688913 -92941237 - L2 LINE L2 -1 3271 1552 28 29 0 0 chr5 106689721 106689756 -92940394 + AT_rich Low_complexity Low_complexity 1 35 0 352 287 27 27 chr5 106690169 106690319 -92939831 - L1MC/D LINE L1 -4534 1862 1713 333 321 51 69 chr5 106690321 106690654 -92939496 - HAL1 LINE L1 -1219 1288 962 18812 98 5 2 chr5 106690696 106693424 -92936726 - L1P LINE L1 -978 5168 2432 2954 93 2 0 chr5 106693420 106693816 -92936334 - L1P3 LINE L1 -6061 400 4 * 1780 160 17 130 chr5 106693816 106694292 -92935858 + LTR38B LTR ERV1 189 610 0 2474 250 30 32 chr5 106694781 106695520 -92934630 + L1ME1 LINE L1 5333 6069 -97 462 18 0 0 chr5 106695546 106695601 -92934549 + (TG)n Simple_repeat Simple_repeat 2 56 0 304 143 196 0 chr5 106695702 106695758 -92934392 - MER89 LTR ERV1 -73 486 420 27 62 0 0 chr5 106695758 106695806 -92934344 + AT_rich Low_complexity Low_complexity 1 48 0 2312 29 4 4 chr5 106696049 106696329 -92933821 - L1PA3 LINE L1 0 6155 5876 4580 19 0 0 chr5 106696329 106696856 -92933294 + L1PA3 LINE L1 5335 5861 -294 268 386 35 7 chr5 106697800 106697945 -92932205 + MIR SINE MIR 19 167 -95 749 245 33 28 chr5 106697954 106698166 -92931984 - MIR SINE MIR -10 252 40 23 0 0 0 chr5 106699639 106699662 -92930488 + AT_rich Low_complexity Low_complexity 1 23 0 297 0 0 0 chr5 106699779 106699812 -92930338 + (TG)n Simple_repeat Simple_repeat 2 34 0 2141 78 0 7 chr5 106701025 106701353 -92928797 - AluY SINE Alu 0 329 4 533 237 115 0 chr5 106702960 106703099 -92927051 - MIR SINE MIR -20 242 88 3506 196 32 7 chr5 106704506 106705196 -92924954 - MER39 LTR ERV1 0 707 1 284 322 122 24 chr5 106705319 106705524 -92924626 - MIR SINE MIR -6 256 32 797 258 60 83 chr5 106705666 106706057 -92924093 - MER34 LTR ERV1 -23 519 142 2030 158 61 17 chr5 106706057 106706467 -92923683 + MSTA LTR MaLR 1 428 0 797 258 60 83 chr5 106706467 106706606 -92923544 - MER34 LTR ERV1 -400 142 1 3904 34 6 0 chr5 106707239 106707708 -92922442 - L1PA3 LINE L1 0 6155 5684 40 0 0 36 chr5 106708013 106708033 -92922117 + AT_rich Low_complexity Low_complexity 1 20 -33 1722 212 0 0 chr5 106708033 106708340 -92921810 + 7SLRNA srpRNA srpRNA 1 307 -13 40 0 0 36 chr5 106708340 106708374 -92921776 + AT_rich Low_complexity Low_complexity 20 53 0 1889 140 0 20 chr5 106708675 106708994 -92921156 - AluSx SINE Alu 0 312 7 1164 164 75 0 chr5 106709077 106709291 -92920859 + MER30 DNA MER1_type 1 230 0 2414 52 0 3 chr5 106709379 106709670 -92920480 + AluY SINE Alu 1 290 -21 1031 165 43 0 chr5 106709830 106710018 -92920132 - L1PA13 LINE L1 0 6163 5968 246 318 114 42 chr5 106710090 106710326 -92919824 + MIR SINE MIR 10 262 0 38 22 0 0 chr5 106710699 106710744 -92919406 + AT_rich Low_complexity Low_complexity 1 45 0 237 159 0 0 chr5 106710745 106710789 -92919361 + (TA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr5 106711117 106711138 -92919012 + AT_rich Low_complexity Low_complexity 1 21 0 11529 100 2 1 chr5 106711347 106712924 -92917226 + THE1A-int LTR MaLR 2 1580 0 1976 112 19 70 chr5 106712924 106713298 -92916852 + THE1A LTR MaLR 1 355 0 12805 34 2 2 chr5 106713351 106715674 -92914476 + L1PA4 LINE L1 3832 6152 -3 5675 220 121 72 chr5 106715834 106716181 -92913969 + L1MDa LINE L1 17 346 -6194 1825 152 37 35 chr5 106716181 106716555 -92913595 - THE1C LTR MaLR 0 375 1 5675 220 121 72 chr5 106716555 106718075 -92912075 + L1MDa LINE L1 346 2054 -4486 275 143 0 0 chr5 106718075 106718117 -92912033 - MLT1E2 LTR MaLR -535 91 50 5675 220 121 72 chr5 106718117 106718453 -92911697 + L1MDa LINE L1 2054 2372 -4168 26 93 0 0 chr5 106718454 106718529 -92911621 + AT_rich Low_complexity Low_complexity 1 75 0 43 20 0 0 chr5 106718621 106718671 -92911479 + AT_rich Low_complexity Low_complexity 1 50 0 1381 217 39 14 chr5 106718741 106719027 -92911123 + AluJo SINE Alu 1 293 -19 1933 126 0 0 chr5 106719032 106719302 -92910848 + AluSg SINE Alu 1 270 -40 429 36 0 0 chr5 106719302 106719357 -92910793 + (TC)n Simple_repeat Simple_repeat 2 56 0 382 223 25 0 chr5 106719378 106719499 -92910651 - L1M4 LINE L1 -1720 4426 4303 227 217 22 0 chr5 106719500 106719546 -92910604 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 767 365 22 49 chr5 106719546 106719998 -92910152 + L1MD1 LINE L1 396 835 -6234 1340 270 51 11 chr5 106720018 106720629 -92909521 + L1M3 LINE L1 4065 4699 -1447 277 214 0 18 chr5 106720630 106720686 -92909464 + L1MD1 LINE L1 960 1014 -6084 2292 283 63 29 chr5 106721453 106722984 -92907166 + L1MD1 LINE L1 1491 2777 -4390 309 153 0 0 chr5 106722985 106723044 -92907106 + L1MA4 LINE L1 6147 6205 -95 804 244 10 10 chr5 106723044 106723237 -92906913 + MLT1A1 LTR MaLR 171 363 -2 11871 208 35 28 chr5 106723263 106727482 -92902668 + L1MA8 LINE L1 3293 7541 -169 1579 166 17 42 chr5 106727482 106727794 -92902356 - AluJo SINE Alu 0 305 1 11871 208 35 28 chr5 106727794 106727945 -92902205 + L1MA8 LINE L1 7541 7690 -20 930 256 100 4 chr5 106727985 106728541 -92901609 + L1M3 LINE L1 4715 5379 -801 266 0 29 0 chr5 106728541 106728575 -92901575 + (TA)n Simple_repeat Simple_repeat 2 36 0 930 256 100 4 chr5 106728575 106728649 -92901501 + L1M3 LINE L1 5379 5445 -735 * 2846 238 68 50 chr5 106728643 106730258 -92899892 + L1MD1 LINE L1 4836 6493 -743 193 128 43 0 chr5 106730258 106730305 -92899845 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 401 239 11 23 chr5 106730333 106730421 -92899729 + MER21B LTR ERV1 1 87 -776 806 251 33 24 chr5 106730478 106730689 -92899461 + MER21B LTR ERV1 98 310 -553 992 241 71 47 chr5 106730693 106730935 -92899215 + MER21B LTR ERV1 459 713 -150 252 0 0 0 chr5 106730935 106730963 -92899187 + (AATTG)n Simple_repeat Simple_repeat 2 29 0 992 241 71 47 chr5 106730963 106731060 -92899090 + MER21B LTR ERV1 713 806 -57 282 132 0 0 chr5 106731086 106731139 -92899011 + (TTG)n Simple_repeat Simple_repeat 2 54 0 1443 187 49 94 chr5 106731143 106731609 -92898541 + L1MD1 LINE L1 6510 6954 -309 1799 223 54 0 chr5 106731968 106732359 -92897791 - MER54A LTR ERVL 0 901 490 713 287 60 0 chr5 106732697 106732913 -92897237 - MIR SINE MIR -21 241 13 356 267 33 73 chr5 106733113 106733263 -92896887 - MIR SINE MIR 0 262 119 1679 228 41 43 chr5 106733540 106733979 -92896171 + LTR47B LTR ERVL 1 438 -5 1067 338 47 53 chr5 106735510 106736587 -92893563 + LTR57-int LTR ERVL 1494 2397 -2946 371 232 14 42 chr5 106736594 106736750 -92893400 - MER52A LTR ERV1 -5 1750 1603 2872 80 3 5 chr5 106736750 106737126 -92893024 - THE1C LTR MaLR 0 375 1 412 298 126 61 chr5 106737133 106737395 -92892755 - MER52A LTR ERV1 -273 1482 1204 * 1015 238 256 58 chr5 106737373 106737999 -92892151 - LTR28 LTR ERV1 -270 750 1 1894 132 0 0 chr5 106738069 106738326 -92891824 + AluSx SINE Alu 20 276 -36 432 37 0 0 chr5 106738332 106738386 -92891764 + (TAAAA)n Simple_repeat Simple_repeat 2 55 0 279 336 73 7 chr5 106738386 106738523 -92891627 + LTR57-int LTR ERVL 2609 2754 -3293 2413 97 0 0 chr5 106739426 106739735 -92890415 + AluSc SINE Alu 1 309 0 450 322 60 34 chr5 106739829 106740329 -92889821 + LTR57-int LTR ERVL 3619 4669 -985 291 228 0 63 chr5 106741119 106741198 -92888952 + LOR1-int LTR ERV1 3978 4258 -2340 1702 216 10 60 chr5 106741212 106741628 -92888522 + LTR47B LTR ERVL 49 443 0 250 274 144 20 chr5 106741928 106742129 -92888021 + L1MEd LINE L1 988 1213 -4906 1653 238 81 33 chr5 106742376 106742917 -92887233 + MLT1F1 LTR MaLR 1 567 0 24 0 0 0 chr5 106743020 106743044 -92887106 + AT_rich Low_complexity Low_complexity 1 24 0 2436 211 71 22 chr5 106743755 106744046 -92886104 - MER77 LTR ERV1 0 605 330 2469 72 0 3 chr5 106744046 106744351 -92885799 - AluY SINE Alu -7 304 1 2436 211 71 22 chr5 106744351 106744636 -92885514 - MER77 LTR ERV1 -275 330 1 26 0 0 0 chr5 106744679 106744705 -92885445 + AT_rich Low_complexity Low_complexity 1 26 0 852 286 115 47 chr5 106746622 106747108 -92883042 + L2 LINE L2 950 1468 -1846 891 217 24 25 chr5 106747251 106747487 -92882663 - L1MD2 LINE L1 0 6359 6004 3538 192 65 22 chr5 106747871 106748704 -92881446 - L1MC3 LINE L1 -23 8180 7312 5312 274 53 34 chr5 106748712 106751576 -92878574 - L1MC3 LINE L1 -747 5817 3341 739 203 14 0 chr5 106751597 106751735 -92878415 + BC200 scRNA scRNA 1 140 -60 689 294 80 11 chr5 106751746 106752123 -92878027 - L1MC3 LINE L1 -3239 3325 2923 287 291 119 18 chr5 106752232 106752430 -92877720 - L1MC3 LINE L1 -5836 341 92 204 291 0 0 chr5 106752644 106752699 -92877451 - L3b LINE CR1 0 1583 1529 1685 142 189 9 chr5 106754154 106754492 -92875658 - MSTA LTR MaLR -29 399 1 287 197 98 0 chr5 106755441 106755502 -92874648 + LTR43 LTR ERV1 222 288 -314 732 62 0 0 chr5 106756046 106756142 -92874008 + AluY SINE Alu 207 302 -9 1970 70 4 8 chr5 106756142 106756399 -92873751 + AluY SINE Alu 40 295 -16 359 56 19 0 chr5 106756885 106756939 -92873211 + (TG)n Simple_repeat Simple_repeat 2 56 0 563 257 41 50 chr5 106757560 106757778 -92872372 - MER58A DNA MER1_type 0 224 9 194 180 11 34 chr5 106757914 106758003 -92872147 + (TA)n Simple_repeat Simple_repeat 1 87 0 185 78 39 39 chr5 106758028 106758079 -92872071 + (TA)n Simple_repeat Simple_repeat 2 52 0 1112 210 112 19 chr5 106758122 106758389 -92871761 - MSTA LTR MaLR -136 292 1 9106 150 6 38 chr5 106758389 106760020 -92870130 - MSTA-int LTR MaLR 0 1580 3 1845 161 130 16 chr5 106760022 106760406 -92869744 - MSTA LTR MaLR 0 428 1 284 214 0 10 chr5 106760444 106760542 -92869608 + (TA)n Simple_repeat Simple_repeat 1 97 0 812 251 70 24 chr5 106760621 106760952 -92869198 - L1MC4 LINE L1 -672 7370 7025 307 259 44 48 chr5 106760982 106761210 -92868940 - L1ME LINE L1 -5284 921 695 2257 81 10 3 chr5 106761247 106761545 -92868605 + AluY SINE Alu 1 300 -11 313 392 51 26 chr5 106761730 106762041 -92868109 - L1ME LINE L1 -5937 459 141 23 54 0 0 chr5 106762141 106762178 -92867972 + AT_rich Low_complexity Low_complexity 1 37 0 200 152 30 61 chr5 106762446 106762512 -92867638 + A-rich Low_complexity Low_complexity 2 65 0 2083 94 47 0 chr5 106762682 106762958 -92867192 + AluSq SINE Alu 1 289 -24 346 317 89 48 chr5 106763476 106763747 -92866403 + L1ME4a LINE L1 5840 6121 0 2255 193 39 15 chr5 106763781 106764238 -92865912 + MER70A LTR ERVL 1 468 -4 2614 55 0 0 chr5 106765626 106765935 -92864215 - AluY SINE Alu -2 309 1 1770 160 3 10 chr5 106767684 106767977 -92862173 + AluSx SINE Alu 10 300 -12 489 47 0 0 chr5 106767989 106768053 -92862097 + (CA)n Simple_repeat Simple_repeat 2 65 0 27 29 0 0 chr5 106768144 106768178 -92861972 + AT_rich Low_complexity Low_complexity 1 34 0 1888 133 3 18 chr5 106768903 106769212 -92860938 + AluSx SINE Alu 1 305 0 21 0 0 0 chr5 106770579 106770600 -92859550 + AT_rich Low_complexity Low_complexity 1 21 0 460 364 44 44 chr5 106771238 106771603 -92858547 + MLT1K LTR MaLR 146 510 -78 6390 66 5 3 chr5 106772473 106773325 -92856825 - L1P LINE L1 -3316 2830 1978 838 74 0 16 chr5 106773325 106773446 -92856704 + L1PA5 LINE L1 6036 6154 0 1218 154 58 162 chr5 106774512 106774888 -92855262 - MER1B DNA MER1_type 0 337 1 2861 16 0 0 chr5 106775204 106775519 -92854631 + AluYb8 SINE Alu 1 315 -3 402 304 120 5 chr5 106777213 106777430 -92852720 + MIR SINE MIR 15 256 -6 2561 40 0 3 chr5 106777533 106777835 -92852315 - AluY SINE Alu -10 301 1 28 29 0 0 chr5 106777983 106778018 -92852132 + AT_rich Low_complexity Low_complexity 1 35 0 325 357 45 13 chr5 106780320 106780477 -92849673 - L2 LINE L2 0 3272 3111 32 0 0 0 chr5 106781764 106781796 -92848354 + AT_rich Low_complexity Low_complexity 1 32 0 2142 107 17 0 chr5 106781931 106782230 -92847920 - AluSq SINE Alu -8 305 2 186 115 58 0 chr5 106783418 106783470 -92846680 + (TA)n Simple_repeat Simple_repeat 1 55 0 21 0 0 0 chr5 106783855 106783876 -92846274 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 106784723 106784751 -92845399 + AT_rich Low_complexity Low_complexity 1 28 0 1941 142 14 0 chr5 106785122 106785417 -92844733 - AluSx SINE Alu -13 299 1 180 297 78 31 chr5 106785645 106785709 -92844441 + MIR SINE MIR 45 111 -97 214 162 0 0 chr5 106786094 106786131 -92844019 + GA-rich Low_complexity Low_complexity 2 38 0 35 24 0 0 chr5 106788977 106789019 -92841131 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr5 106789162 106789191 -92840959 + AT_rich Low_complexity Low_complexity 1 29 0 231 226 16 0 chr5 106789242 106789304 -92840846 + (TATATG)n Simple_repeat Simple_repeat 3 65 0 2481 148 24 2 chr5 106790708 106791133 -92839017 - MER57B LTR ERV1 0 434 1 25 0 0 0 chr5 106792600 106792625 -92837525 + AT_rich Low_complexity Low_complexity 1 25 0 1964 125 14 0 chr5 106792891 106793216 -92836934 + AluSq SINE Alu 1 329 0 192 77 0 0 chr5 106795055 106795081 -92835069 + (GA)n Simple_repeat Simple_repeat 1 26 0 66 25 0 0 chr5 106796681 106796761 -92833389 + AT_rich Low_complexity Low_complexity 1 80 0 1129 259 125 30 chr5 106799360 106799801 -92830349 - MLT1E LTR MaLR 0 593 111 2028 109 29 26 chr5 106799935 106800247 -92829903 + AluSq SINE Alu 1 313 0 21 0 0 0 chr5 106800356 106800377 -92829773 + AT_rich Low_complexity Low_complexity 1 21 0 200 360 97 52 chr5 106801070 106801514 -92828636 + L2 LINE L2 2808 3271 -1 394 325 48 16 chr5 106803115 106803160 -92826990 - MIR SINE MIR -49 213 171 1028 199 58 0 chr5 106803160 106803366 -92826784 + MER20 DNA MER1_type 1 218 -1 394 325 48 16 chr5 106803366 106803508 -92826642 - MIR SINE MIR -91 171 20 201 315 203 14 chr5 106804699 106804842 -92825308 - MIR3 SINE MIR -7 201 32 222 314 139 12 chr5 106806039 106806125 -92824025 + MIR SINE MIR 21 117 -145 339 141 39 0 chr5 106806746 106806824 -92823326 + CT-rich Low_complexity Low_complexity 2 82 0 1672 142 56 8 chr5 106806830 106807097 -92823053 - AluSx SINE Alu -32 280 1 201 39 0 0 chr5 106808059 106808085 -92822065 + (TA)n Simple_repeat Simple_repeat 2 27 0 297 236 264 7 chr5 106808199 106808323 -92821827 - MIR3 SINE MIR -62 146 15 697 321 22 48 chr5 106808694 106809111 -92821039 - L1PA12 LINE L1 -7169 412 7 1980 96 3 34 chr5 106809145 106809464 -92820686 + AluY SINE Alu 1 310 0 369 300 14 36 chr5 106809502 106809642 -92820508 + L2 LINE L2 3159 3295 -18 213 282 12 12 chr5 106809650 106809735 -92820415 + GA-rich Low_complexity Low_complexity 3 87 0 591 275 51 126 chr5 106810139 106810685 -92819465 + MLT1H1 LTR MaLR 45 549 -6 1807 156 20 0 chr5 106811447 106811742 -92818408 - AluSx SINE Alu -11 301 1 965 207 74 25 chr5 106813674 106813959 -92816191 - MER33 DNA MER1_type -22 302 4 2323 182 33 14 chr5 106814407 106814923 -92815227 - L1MA9 LINE L1 0 6312 5787 36 70 0 0 chr5 106814927 106814998 -92815152 + AT_rich Low_complexity Low_complexity 1 71 0 301 343 172 0 chr5 106816533 106816667 -92813483 - MER5A DNA MER1_type -1 188 32 2033 160 47 59 chr5 106816692 106817116 -92813034 + MSTA LTR MaLR 10 428 0 849 337 48 22 chr5 106817256 106817669 -92812481 + MLT1K LTR MaLR 122 545 -43 26 30 0 0 chr5 106818076 106818109 -92812041 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 106818472 106818495 -92811655 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 106818545 106818570 -92811580 + AT_rich Low_complexity Low_complexity 1 25 0 297 250 31 0 chr5 106819422 106819486 -92810664 + L2 LINE L2 3188 3253 -19 269 51 26 0 chr5 106820307 106820346 -92809804 + (TA)n Simple_repeat Simple_repeat 2 41 0 1996 144 0 3 chr5 106820952 106821251 -92808899 + AluSx SINE Alu 1 298 -14 1231 228 70 14 chr5 106821550 106821835 -92808315 - AluJo SINE Alu -1 301 1 333 0 0 0 chr5 106823168 106823205 -92806945 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1094 151 146 155 chr5 106823724 106824156 -92805994 + MSTA LTR MaLR 1 428 0 194 192 19 0 chr5 106824491 106824543 -92805607 + T-rich Low_complexity Low_complexity 2 54 0 25 51 0 0 chr5 106824651 106824690 -92805460 + AT_rich Low_complexity Low_complexity 1 39 0 213 39 0 0 chr5 106825468 106825494 -92804656 + (TA)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr5 106825494 106825516 -92804634 + AT_rich Low_complexity Low_complexity 1 22 0 6027 153 57 23 chr5 106825518 106826705 -92803445 + Tigger3b DNA MER2_type 3 1230 -1 25 31 0 0 chr5 106826931 106826963 -92803187 + AT_rich Low_complexity Low_complexity 1 32 0 379 200 12 0 chr5 106827428 106827508 -92802642 + Tigger3(Golem) DNA MER2_type 2381 2461 -568 288 322 35 23 chr5 106827848 106827935 -92802215 + L2 LINE L2 3153 3240 -32 378 376 103 40 chr5 106828145 106828544 -92801606 - L2 LINE L2 -13 3259 2836 22 35 0 0 chr5 106828949 106828978 -92801172 + AT_rich Low_complexity Low_complexity 1 29 0 725 300 79 28 chr5 106829292 106829685 -92800465 - MLT1L LTR MaLR -180 435 23 219 130 14 58 chr5 106829732 106829801 -92800349 + (TATAA)n Simple_repeat Simple_repeat 3 68 0 1606 183 126 28 chr5 106829887 106830275 -92799875 - MSTA LTR MaLR 0 428 3 184 274 68 0 chr5 106830412 106830485 -92799665 + MIR SINE MIR 173 250 -12 19069 187 16 3 chr5 106830946 106833385 -92796765 - L1PA13 LINE L1 0 7601 5195 222 62 0 0 chr5 106833385 106833417 -92796733 + (TTG)n Simple_repeat Simple_repeat 3 34 0 19069 187 16 3 chr5 106833417 106835802 -92794348 - L1PA13 LINE L1 -2406 5195 2714 2039 173 39 0 chr5 106835791 106836149 -92794001 - L1PA13 LINE L1 -7209 372 1 * 2129 191 20 8 chr5 106836234 106836632 -92793518 - MER49 LTR ERV1 0 923 521 28775 89 7 8 chr5 106836638 106842775 -92787375 - L1PA6 LINE L1 -18 6136 13 2652 130 108 21 chr5 106842777 106843247 -92786903 - MER49 LTR ERV1 -412 511 1 680 289 140 18 chr5 106843439 106843775 -92786375 - LTR40c LTR ERVL -70 395 19 28 48 0 0 chr5 106843984 106844026 -92786124 + AT_rich Low_complexity Low_complexity 1 42 0 743 225 60 22 chr5 106845187 106845369 -92784781 + MER5A DNA MER1_type 1 189 0 206 157 0 20 chr5 106845656 106845707 -92784443 + T-rich Low_complexity Low_complexity 5 54 0 354 276 90 45 chr5 106846228 106846384 -92783766 + MIR SINE MIR 89 251 -11 265 246 14 0 chr5 106846692 106846761 -92783389 - MLT1I LTR MaLR -328 81 12 2846 22 0 0 chr5 106847375 106847693 -92782457 + AluYb8 SINE Alu 1 318 0 405 244 70 45 chr5 106847792 106847948 -92782202 + MLT1I LTR MaLR 249 408 -1 299 271 21 21 chr5 106848133 106848273 -92781877 - MER104 DNA Tc2 -1 179 40 708 323 17 9 chr5 106848418 106848751 -92781399 + MLT1H1 LTR MaLR 9 391 -204 242 234 97 95 chr5 106848799 106848909 -92781241 + MLT1H LTR MaLR 410 514 -35 180 0 0 0 chr5 106849093 106849113 -92781037 + (GA)n Simple_repeat Simple_repeat 1 20 0 2109 110 0 3 chr5 106849214 106849506 -92780644 - AluSg SINE Alu -19 291 1 1003 295 55 6 chr5 106849564 106849889 -92780261 - MER93a LTR ERV1 -1 401 61 707 262 88 39 chr5 106850144 106850449 -92779701 + LTR52 LTR ERVL 1 320 -101 22 0 0 0 chr5 106850547 106850569 -92779581 + AT_rich Low_complexity Low_complexity 1 22 0 460 216 0 52 chr5 106850569 106850685 -92779465 - MER3 DNA MER1_type 0 209 100 749 278 51 29 chr5 106850716 106851206 -92778944 + L1M4 LINE L1 2669 3169 -2977 340 169 34 22 chr5 106851185 106851274 -92778876 + L1MEc LINE L1 2300 2389 -4007 * 606 148 123 26 chr5 106851286 106851441 -92778709 + L1MB7 LINE L1 6015 6184 0 312 155 0 82 chr5 106851554 106851651 -92778499 - L1MA7 LINE L1 0 6291 6203 765 294 83 52 chr5 106851664 106851943 -92778207 + L1MEc LINE L1 3293 3562 -2653 2105 118 0 3 chr5 106851943 106852262 -92777888 + AluSp SINE Alu 1 318 0 765 294 83 52 chr5 106852262 106852439 -92777711 + L1MEc LINE L1 3562 3732 -2483 294 29 0 0 chr5 106852439 106852474 -92777676 + (TAA)n Simple_repeat Simple_repeat 2 36 0 765 294 83 52 chr5 106852474 106852663 -92777487 + L1MEc LINE L1 3732 3961 -2254 319 360 7 29 chr5 106853141 106853280 -92776870 + MIR3 SINE MIR 9 144 -64 252 86 0 0 chr5 106853308 106853343 -92776807 + (TA)n Simple_repeat Simple_repeat 1 35 0 21 0 0 0 chr5 106853610 106853631 -92776519 + AT_rich Low_complexity Low_complexity 1 21 0 242 262 0 0 chr5 106853730 106853791 -92776359 + L1ME LINE L1 5584 5644 -477 263 318 45 27 chr5 106854052 106854162 -92775988 - L2 LINE L2 -4 3309 3198 231 36 0 0 chr5 106854248 106854276 -92775874 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 252 221 266 18 chr5 106855218 106855331 -92774819 + LTR40a LTR ERVL 1 141 -378 332 378 40 0 chr5 106855878 106856026 -92774124 - L2 LINE L2 -583 2731 2578 195 354 91 0 chr5 106856138 106856237 -92773913 - L2 LINE L2 0 3272 3165 537 353 57 49 chr5 106856243 106856750 -92773400 - LTR33 LTR ERVL -10 511 1 186 103 0 0 chr5 106857023 106857052 -92773098 + (CA)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr5 106857065 106857089 -92773061 + AT_rich Low_complexity Low_complexity 1 24 0 1667 171 0 4 chr5 106857143 106857418 -92772732 + AluJb SINE Alu 35 308 -4 2014 172 32 30 chr5 106857461 106857925 -92772225 + L1MA7 LINE L1 5825 6289 -2 25 51 0 0 chr5 106858095 106858134 -92772016 + AT_rich Low_complexity Low_complexity 1 39 0 292 329 127 11 chr5 106861103 106861480 -92768670 + L1MC4a LINE L1 5506 5926 -1882 249 119 0 0 chr5 106861482 106861524 -92768626 + (CA)n Simple_repeat Simple_repeat 1 42 0 676 219 57 10 chr5 106861524 106861716 -92768434 - HsTC2a DNA Tc2 -6 736 536 5219 109 25 14 chr5 106861841 106862645 -92767505 - L1PA13 LINE L1 -1 6162 5350 3144 194 12 5 chr5 106862656 106863317 -92766833 + L1PA13 LINE L1 4665 5330 -816 615 310 80 22 chr5 106863318 106863679 -92766471 - HsTC2a DNA Tc2 -360 384 3 481 284 97 59 chr5 106864083 106864403 -92765747 - L2 LINE L2 -1905 1409 1078 2572 43 3 0 chr5 106865068 106865373 -92764777 + AluY SINE Alu 1 306 -5 218 116 23 0 chr5 106865494 106865537 -92764613 + (ATG)n Simple_repeat Simple_repeat 2 45 0 27 0 0 0 chr5 106865794 106865821 -92764329 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 106867893 106867914 -92762236 + AT_rich Low_complexity Low_complexity 1 21 0 1558 131 92 53 chr5 106867953 106868313 -92761837 - THE1C LTR MaLR 0 375 2 2036 215 69 22 chr5 106868369 106868885 -92761265 + L1MA9 LINE L1 999 1548 -4593 5170 140 29 11 chr5 106868885 106870611 -92759539 - L1PA15 LINE L1 -1 6164 4407 2036 215 69 22 chr5 106870611 106870689 -92759461 + L1MA9 LINE L1 1548 1621 -4520 1922 211 17 42 chr5 106870745 106871271 -92758879 + L1MA9 LINE L1 4275 4787 -1423 624 222 7 20 chr5 106871270 106871423 -92758727 + L1MA9 LINE L1 5955 6105 -271 * 29 28 0 0 chr5 106871655 106871691 -92758459 + AT_rich Low_complexity Low_complexity 1 36 0 1633 183 0 0 chr5 106871747 106872031 -92758119 - L1MA9 LINE L1 -371 5941 5658 4991 141 68 11 chr5 106873475 106874381 -92755769 - Tigger3b DNA MER2_type 0 1231 274 526 209 0 19 chr5 106874378 106874483 -92755667 - Tigger3b DNA MER2_type -1128 103 1 * 1677 200 54 78 chr5 106874542 106875006 -92755144 + MLT2B3 LTR ERVL 8 460 -94 276 185 0 0 chr5 106875155 106875209 -92754941 + (CA)n Simple_repeat Simple_repeat 2 55 0 372 171 0 0 chr5 106875229 106875299 -92754851 + MLT2B3 LTR ERVL 451 520 0 408 359 24 12 chr5 106875333 106875500 -92754650 - MLT1J LTR MaLR -176 335 167 234 380 49 0 chr5 106876065 106876207 -92753943 + LTR67 LTR ERVL 113 261 -296 186 43 0 0 chr5 106878003 106878026 -92752124 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1699 173 39 15 chr5 106878026 106878361 -92751789 - MER2 DNA MER2_type 0 344 2 802 212 7 0 chr5 106878997 106879148 -92751002 + MLT1B LTR MaLR 239 390 0 296 326 11 0 chr5 106879286 106879378 -92750772 + L2 LINE L2 2968 3060 -253 244 245 92 92 chr5 106879357 106879455 -92750695 + L2 LINE L2 3174 3271 -1 * 812 222 228 147 chr5 106880162 106880947 -92749203 + MER52A LTR ERV1 663 1511 -244 243 246 107 49 chr5 106880948 106881070 -92749080 + MER52A LTR ERV1 1627 1755 0 1971 156 132 5 chr5 106881319 106881697 -92748453 + MSTA LTR MaLR 3 428 0 651 225 25 19 chr5 106881819 106882405 -92747745 + LTR68 LTR ERV1 1 740 0 653 303 41 22 chr5 106882490 106882804 -92747346 + HAL1b LINE L1 245 564 -784 257 359 48 0 chr5 106882920 106883087 -92747063 + HAL1b LINE L1 448 622 -726 265 279 101 32 chr5 106883132 106883290 -92746860 + L1ME LINE L1 5492 5660 -461 282 105 0 0 chr5 106883491 106883529 -92746621 - HERVL18 LTR ERVL -2398 3649 3612 914 113 45 0 chr5 106883582 106883759 -92746391 - L1MA8 LINE L1 -4 6287 6103 1046 117 0 61 chr5 106883759 106883952 -92746198 + L1MA2 LINE L1 6113 6297 -7 2129 166 44 5 chr5 106883962 106884372 -92745778 - L1MA8 LINE L1 -174 6117 5692 1221 259 98 9 chr5 106884372 106884700 -92745450 - LTR18A LTR ERVL 0 357 1 2051 181 0 0 chr5 106884701 106885027 -92745123 - HERVL18 LTR ERVL 0 6047 5722 * 16669 170 18 6 chr5 106885008 106888719 -92741431 - HERVL18 LTR ERVL -2170 3877 1 1238 218 109 56 chr5 106888725 106888803 -92741347 - LTR18A LTR ERVL 0 357 285 2449 75 3 0 chr5 106888803 106889110 -92741040 + AluY SINE Alu 1 308 -3 1238 218 109 56 chr5 106889110 106889370 -92740780 - LTR18A LTR ERVL -72 285 1 212 175 79 0 chr5 106890288 106890351 -92739799 + (TATAA)n Simple_repeat Simple_repeat 4 71 0 965 230 34 0 chr5 106890427 106890631 -92739519 + Tigger2 DNA MER2_type 2508 2718 0 223 373 36 0 chr5 106890755 106890865 -92739285 + MIR3 SINE MIR 72 185 -23 29 28 0 0 chr5 106891100 106891136 -92739014 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr5 106891173 106891203 -92738947 + AT_rich Low_complexity Low_complexity 1 30 0 255 253 11 11 chr5 106892248 106892339 -92737811 + (TA)n Simple_repeat Simple_repeat 1 91 0 2832 152 7 2 chr5 106892762 106893224 -92736926 - L1PA15 LINE L1 -11 6154 5691 253 160 13 40 chr5 106893224 106893299 -92736851 + L1 LINE L1 4980 5052 -1094 2070 115 7 0 chr5 106893608 106893896 -92736254 + AluSg SINE Alu 1 290 -20 1732 186 16 43 chr5 106894030 106894311 -92735839 - MER46B DNA MER2_type -2495 236 -51 2406 111 31 6 chr5 106894311 106894664 -92735486 - THE1B LTR MaLR 0 364 3 5776 162 85 119 chr5 106894666 106896374 -92733776 - THE1B-int LTR MaLR 0 1651 3 2220 132 40 3 chr5 106896376 106896725 -92733425 - THE1B LTR MaLR 0 364 3 1732 186 16 43 chr5 106896725 106896808 -92733342 - MER46B DNA MER2_type -2646 85 1 2016 126 50 28 chr5 106897343 106897707 -92732443 + THE1C LTR MaLR 1 372 -3 324 48 0 0 chr5 106897707 106897749 -92732401 + (CA)n Simple_repeat Simple_repeat 2 43 0 328 282 32 6 chr5 106898953 106899109 -92731041 + (TA)n Simple_repeat Simple_repeat 2 161 0 1986 73 0 0 chr5 106899972 106900270 -92729880 - AluY SINE Alu 0 334 37 181 316 18 18 chr5 106900532 106900589 -92729561 - L2 LINE L2 -74 3239 3183 264 215 21 11 chr5 106900622 106900715 -92729435 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 238 228 26 16 chr5 106901546 106901746 -92728404 + CT-rich Low_complexity Low_complexity 1 202 0 198 0 0 0 chr5 106901826 106901848 -92728302 + (CAGTA)n Simple_repeat Simple_repeat 5 26 0 240 234 125 16 chr5 106901891 106901955 -92728195 - L2 LINE L2 -2 3311 3241 301 287 97 81 chr5 106902345 106902603 -92727547 - L2 LINE L2 -902 2412 2151 74 73 0 0 chr5 106902656 106902807 -92727343 + AT_rich Low_complexity Low_complexity 1 151 0 202 140 20 20 chr5 106902842 106902892 -92727258 + (TA)n Simple_repeat Simple_repeat 2 51 0 31 0 0 0 chr5 106902900 106902931 -92727219 + AT_rich Low_complexity Low_complexity 1 31 0 6280 205 74 10 chr5 106903128 106904671 -92725479 + L1 LINE L1 3275 4915 -1231 980 160 35 0 chr5 106904671 106904840 -92725310 + AluSg/x SINE Alu 137 311 -1 4783 126 21 37 chr5 106904841 106905656 -92724494 + L1PA16 LINE L1 5324 6125 -41 23 33 0 0 chr5 106906300 106906330 -92723820 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr5 106909955 106909978 -92720172 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 271 362 92 19 chr5 106911668 106911875 -92718275 - L2 LINE L2 -220 3052 2831 21 36 0 0 chr5 106912355 106912383 -92717767 + AT_rich Low_complexity Low_complexity 1 28 0 532 306 58 27 chr5 106912476 106912734 -92717416 + Charlie8 DNA MER1_type 7 272 -2145 866 221 20 5 chr5 106912861 106913056 -92717094 - MER105 DNA DNA -5 199 2 222 191 0 0 chr5 106913639 106913686 -92716464 + (CA)n Simple_repeat Simple_repeat 2 48 0 303 180 38 60 chr5 106913688 106913871 -92716279 + (TA)n Simple_repeat Simple_repeat 1 179 0 1555 173 221 8 chr5 106913924 106914277 -92715873 + MSTA LTR MaLR 1 428 0 1086 128 53 5 chr5 106914277 106914465 -92715685 + MSTA-int LTR MaLR 1 197 -1454 7775 156 14 34 chr5 106914892 106916275 -92713875 + MSTA-int LTR MaLR 194 1548 -32 1166 193 135 59 chr5 106916825 106917157 -92712993 - MSTD LTR MaLR 0 396 85 1553 171 20 0 chr5 106917157 106917409 -92712741 - AluJo SINE Alu -55 257 1 1166 193 135 59 chr5 106917409 106917486 -92712664 - MSTD LTR MaLR -311 85 15 5111 229 112 34 chr5 106917489 106919095 -92711055 - MSTD-int LTR MaLR 0 1735 4 1012 209 212 30 chr5 106919099 106919434 -92710716 - MSTD LTR MaLR 0 396 1 10061 155 6 4 chr5 106919463 106921954 -92708196 - L1PA10 LINE L1 -16 6152 3646 1892 137 15 30 chr5 106921975 106922312 -92707838 - THE1C LTR MaLR -43 332 1 953 137 0 0 chr5 106922312 106922458 -92707692 + L1P LINE L1 3501 3646 -2500 1158 124 22 44 chr5 106923606 106923783 -92706367 + L1MA8 LINE L1 6062 6234 -57 4174 94 5 3 chr5 106923783 106924386 -92705764 + L1PA7 LINE L1 5539 6143 -11 1158 124 22 44 chr5 106924386 106924433 -92705717 + L1MA8 LINE L1 6234 6281 -10 234 62 0 0 chr5 106924639 106924671 -92705479 + (TG)n Simple_repeat Simple_repeat 1 32 0 24 96 0 0 chr5 106925191 106925264 -92704886 + AT_rich Low_complexity Low_complexity 1 73 0 5539 217 45 16 chr5 106926066 106928316 -92701834 - L1MC1 LINE L1 -1 6332 4028 355 231 0 0 chr5 106928628 106928719 -92701431 + L1MA8 LINE L1 6201 6291 0 2203 100 0 13 chr5 106929226 106929536 -92700614 - AluSc SINE Alu -3 306 1 5510 109 8 0 chr5 106929540 106930340 -92699810 + L1PA13 LINE L1 5355 6160 -3 330 316 45 24 chr5 106930369 106930660 -92699490 - L1M4 LINE L1 -967 5179 4883 499 124 26 88 chr5 106930693 106930806 -92699344 + MER53 DNA DNA 23 128 -61 25 31 0 0 chr5 106930829 106930861 -92699289 + AT_rich Low_complexity Low_complexity 1 32 0 918 223 73 27 chr5 106931107 106931479 -92698671 - MER3 DNA MER1_type 0 2624 2236 446 250 32 0 chr5 106931482 106931606 -92698544 - MER3 DNA MER1_type -41 168 41 2309 61 0 51 chr5 106931810 106932123 -92698027 - AluY SINE Alu -14 297 1 193 226 151 0 chr5 106932303 106932356 -92697794 + MIR3 SINE MIR 148 208 0 4229 191 131 15 chr5 106932728 106934214 -92695936 + MER52A LTR ERV1 1 1755 0 1191 113 0 0 chr5 106934247 106934415 -92695735 - L1P LINE L1 -4303 1843 1676 7032 60 4 2 chr5 106934415 106935656 -92694494 + L1PA8 LINE L1 4926 6168 -4 25 75 0 0 chr5 106936068 106936121 -92694029 + AT_rich Low_complexity Low_complexity 1 53 0 2039 132 7 0 chr5 106937045 106937348 -92692802 - AluSp SINE Alu -8 305 1 407 331 66 25 chr5 106938332 106938574 -92691576 - MIR SINE MIR 0 262 11 1584 184 37 76 chr5 106938576 106938984 -92691166 + MLT2C1 LTR ERVL 6 397 0 26 0 0 0 chr5 106940337 106940363 -92689787 + AT_rich Low_complexity Low_complexity 1 26 0 230 318 23 31 chr5 106940374 106940503 -92689647 + Charlie8 DNA MER1_type 61 188 -2229 23 33 0 0 chr5 106940878 106940908 -92689242 + AT_rich Low_complexity Low_complexity 1 30 0 193 374 37 31 chr5 106941790 106941953 -92688197 + MIR SINE MIR 48 211 -51 24 0 0 0 chr5 106942421 106942445 -92687705 + AT_rich Low_complexity Low_complexity 1 24 0 337 229 89 67 chr5 106942675 106942854 -92687296 + L3 LINE CR1 1242 1424 -153 1012 274 51 34 chr5 106943874 106944287 -92685863 - LTR52 LTR ERVL -1 420 1 850 279 9 14 chr5 106944287 106944502 -92685648 - LTR52-int LTR ERVL 0 3556 3343 2554 298 49 14 chr5 106944551 106945587 -92684563 - LTR52-int LTR ERVL -216 3340 2093 449 283 55 20 chr5 106945622 106945856 -92684294 - LTR52-int LTR ERVL -1393 2163 1916 200 360 61 26 chr5 106946174 106946288 -92683862 - MIR SINE MIR -73 135 18 189 0 0 0 chr5 106946554 106946575 -92683575 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 2535 45 0 13 chr5 106947044 106947353 -92682797 + AluY SINE Alu 1 305 -6 590 84 28 84 chr5 106947584 106947691 -92682459 - MSTD LTR MaLR -1 395 295 714 381 36 6 chr5 106948057 106948419 -92681731 + L1M3c LINE L1 1 373 -5768 1139 246 92 7 chr5 106948696 106949107 -92681043 + L1M3c LINE L1 904 1349 -4792 222 143 24 0 chr5 106949689 106949731 -92680419 + L2 LINE L2 3230 3272 0 508 180 30 0 chr5 106950159 106950259 -92679891 + MSTC LTR MaLR 67 169 -259 937 156 16 11 chr5 106950305 106950491 -92679659 - L1MA2 LINE L1 0 6304 6118 3335 191 39 12 chr5 106950592 106951583 -92678567 - L1P4 LINE L1 -595 5570 4525 333 356 51 6 chr5 106951921 106952098 -92678052 + MIR SINE MIR 69 253 -9 2067 121 10 10 chr5 106952199 106952497 -92677653 - AluSx SINE Alu -14 298 1 24 0 0 0 chr5 106952949 106952973 -92677177 + AT_rich Low_complexity Low_complexity 1 24 0 270 0 0 0 chr5 106954235 106954265 -92675885 + (CA)n Simple_repeat Simple_repeat 1 30 0 337 358 104 10 chr5 106956323 106956482 -92673668 + L1MEc LINE L1 1435 1578 -4818 1140 199 42 83 chr5 106956482 106956868 -92673282 + MLT1A2 LTR MaLR 1 370 -4 337 358 104 10 chr5 106956868 106956996 -92673154 + L1MEc LINE L1 1578 1749 -4647 2030 189 31 11 chr5 106957260 106957704 -92672446 - L1MC3 LINE L1 0 7785 7333 190 304 0 0 chr5 106958286 106958332 -92671818 - L2 LINE L2 -12 3260 3215 402 21 0 0 chr5 106959045 106959092 -92671058 + (TG)n Simple_repeat Simple_repeat 1 47 0 665 147 59 7 chr5 106960038 106960174 -92669976 + MER67D LTR ERV1 1 143 -371 614 142 18 0 chr5 106960284 106960397 -92669753 + CT-rich Low_complexity Low_complexity 3 117 0 1750 146 44 0 chr5 106960401 106960696 -92669454 - AluSx SINE Alu 0 312 5 2496 260 89 43 chr5 106960703 106962328 -92667822 - L1ME LINE L1 -505 5661 3964 1959 199 36 21 chr5 106962954 106963421 -92666729 + L1MB5 LINE L1 5694 6167 -7 28 0 0 0 chr5 106963435 106963463 -92666687 + AT_rich Low_complexity Low_complexity 1 28 0 228 35 0 0 chr5 106964728 106964757 -92665393 + (TG)n Simple_repeat Simple_repeat 1 29 0 692 157 0 0 chr5 106965353 106965468 -92664682 + L1PA15-16 LINE L1 2568 2682 -4167 22110 34 4 1 chr5 106965570 106968304 -92661846 - L1P LINE L1 -1004 5142 2402 504 147 53 0 chr5 106968345 106968440 -92661710 + LTR23 LTR ERV1 335 434 -3 388 259 63 49 chr5 106968488 106968631 -92661519 + MIR SINE MIR 81 225 -37 364 285 32 16 chr5 106969043 106969166 -92660984 - L3 LINE CR1 -112 1465 1341 1330 193 0 77 chr5 106969846 106970172 -92659978 - L1MD2 LINE L1 -14 6345 6045 549 137 112 142 chr5 106970245 106970478 -92659672 + L1ME1 LINE L1 4859 5084 -1062 1512 253 34 66 chr5 106970545 106970768 -92659382 + L1ME1 LINE L1 5574 5803 -363 2326 90 0 0 chr5 106970768 106971079 -92659071 + AluY SINE Alu 1 311 0 1512 253 34 66 chr5 106971079 106971449 -92658701 + L1ME1 LINE L1 5803 6148 -18 402 299 82 26 chr5 106971551 106971819 -92658331 + L1M4 LINE L1 4995 5277 -869 1136 273 38 84 chr5 106972801 106973146 -92657004 - LTR40a LTR ERVL 0 519 206 3090 141 10 10 chr5 106973146 106973643 -92656507 - LOR1a LTR ERV1 0 497 1 1136 273 38 84 chr5 106973643 106973831 -92656319 - LTR40a LTR ERVL -313 206 11 185 188 0 0 chr5 106974135 106974167 -92655983 + MIR SINE MIR 159 190 -72 31 44 0 0 chr5 106974180 106974225 -92655925 + AT_rich Low_complexity Low_complexity 1 45 0 4895 127 16 52 chr5 106974225 106975155 -92654995 - L1PB1 LINE L1 -1 6150 5254 3110 237 13 1 chr5 106975166 106975934 -92654216 + L1PB1 LINE L1 4457 5233 -913 383 333 18 29 chr5 106975962 106976133 -92654017 + MER5A DNA MER1_type 16 184 -5 5079 22 0 0 chr5 106976723 106977312 -92652838 + L1PA3 LINE L1 5567 6155 0 41 78 0 0 chr5 106977666 106977756 -92652394 + AT_rich Low_complexity Low_complexity 1 90 0 1091 102 0 0 chr5 106978721 106978878 -92651272 - L1PA7 LINE L1 0 6154 5998 1854 259 107 27 chr5 106978878 106980532 -92649618 - L1MB8 LINE L1 -17 6161 4351 * 2713 178 65 9 chr5 106980517 106981089 -92649061 - L1MA8 LINE L1 0 6291 5688 1535 151 23 13 chr5 106981086 106981391 -92648759 - L1MA8 LINE L1 -1264 4882 4575 * 490 216 32 0 chr5 106981519 106981644 -92648506 - L1MA8 LINE L1 -1543 4603 4475 5843 75 14 4 chr5 106981650 106982437 -92647713 - L1PA8 LINE L1 0 6172 5378 5327 184 69 23 chr5 106982418 106983762 -92646388 - L1MA8 LINE L1 -1661 4485 3080 * 2317 187 62 0 chr5 106983762 106984216 -92645934 + Tigger1 DNA MER2_type 1831 2312 -106 4578 198 32 21 chr5 106984217 106985035 -92645115 - L1PA15 LINE L1 -2 6163 5355 2072 120 7 10 chr5 106985035 106985334 -92644816 + AluSq SINE Alu 3 300 -13 4578 198 32 21 chr5 106985334 106986359 -92643791 - L1PA15 LINE L1 -810 5355 4286 * 5064 247 32 11 chr5 106986347 106987863 -92642287 - L1 LINE L1 -2464 3682 2136 3404 155 25 13 chr5 106988056 106988228 -92641922 - LTR38B LTR ERV1 -8 602 434 2315 102 0 3 chr5 106988228 106988542 -92641608 + AluSq SINE Alu 1 313 0 3404 155 25 13 chr5 106988542 106988964 -92641186 - LTR38B LTR ERV1 -176 434 1 257 289 26 70 chr5 106989209 106989323 -92640827 - MIR SINE MIR -77 131 23 22 35 0 0 chr5 106989419 106989448 -92640702 + AT_rich Low_complexity Low_complexity 1 29 0 416 247 0 0 chr5 106989560 106989641 -92640509 + MLT1D LTR MaLR 1 81 -424 600 297 49 29 chr5 106989738 106990088 -92640062 - HAL1b LINE L1 -744 604 248 323 273 203 7 chr5 106992602 106992745 -92637405 - L2 LINE L2 -5 3267 3116 539 258 13 7 chr5 106993915 106994066 -92636084 - MER119 DNA MER1_type -3 580 429 933 254 71 32 chr5 106994070 106994381 -92635769 - MER119 DNA MER1_type -255 328 6 1116 251 84 12 chr5 106995124 106995459 -92634691 - MLT1C LTR MaLR 0 467 109 2031 121 0 17 chr5 106995659 106995957 -92634193 + AluSg SINE Alu 1 293 -17 643 182 0 0 chr5 106996330 106996429 -92633721 - FLAM_A SINE Alu -23 119 21 1198 289 35 19 chr5 106997749 106998116 -92632034 + LTR16B LTR ERVL 92 464 0 14699 153 37 28 chr5 106999787 106999985 -92630165 + Tigger2 DNA MER2_type 3 198 -2520 2020 132 28 0 chr5 106999985 107000274 -92629876 + AluSx SINE Alu 2 298 -14 14699 153 37 28 chr5 107000274 107001169 -92628981 + Tigger2 DNA MER2_type 198 1083 -1635 2111 112 16 3 chr5 107001169 107001474 -92628676 + AluSc SINE Alu 1 309 0 14699 153 37 28 chr5 107001474 107003065 -92627085 + Tigger2 DNA MER2_type 1083 2712 -6 237 146 0 0 chr5 107003249 107003297 -92626853 + (TA)n Simple_repeat Simple_repeat 1 48 0 269 269 39 67 chr5 107003362 107003466 -92626684 + MER91B DNA MER1_type 79 179 -11 30 59 0 0 chr5 107003467 107003518 -92626632 + AT_rich Low_complexity Low_complexity 1 51 0 1959 126 14 7 chr5 107003995 107004289 -92625861 + AluSx SINE Alu 1 296 -16 6083 108 3 24 chr5 107004400 107005576 -92624574 - L1PA14 LINE L1 0 6161 5023 2089 123 3 0 chr5 107005576 107005868 -92624282 - AluSx SINE Alu -17 295 3 6083 108 3 24 chr5 107005868 107006675 -92623475 - L1PA14 LINE L1 -1138 5023 4201 7154 32 1 0 chr5 107006961 107007810 -92622340 - L1PA3 LINE L1 0 6155 5306 408 316 143 15 chr5 107007991 107008327 -92621823 + L1ME4a LINE L1 5482 5860 -261 28 29 0 0 chr5 107008327 107008362 -92621788 + AT_rich Low_complexity Low_complexity 1 35 0 190 333 14 0 chr5 107009414 107009483 -92620667 - MIR3 SINE MIR -14 194 125 262 222 0 0 chr5 107010934 107010997 -92619153 + (TA)n Simple_repeat Simple_repeat 1 63 0 506 33 0 0 chr5 107011198 107011259 -92618891 - L1P LINE L1 -1198 4948 4888 7477 32 1 1 chr5 107011259 107012499 -92617651 + L1PA3 LINE L1 4914 6153 -2 905 191 79 30 chr5 107012528 107012795 -92617355 - LTR56 LTR ERV1 -163 282 3 24 0 0 0 chr5 107012965 107012989 -92617161 + AT_rich Low_complexity Low_complexity 1 24 0 195 222 0 0 chr5 107013045 107013090 -92617060 + CT-rich Low_complexity Low_complexity 3 47 0 2179 196 71 25 chr5 107014316 107014795 -92615355 + MLT1D LTR MaLR 1 501 -4 7558 29 0 0 chr5 107015075 107016093 -92614057 + L1PA3 LINE L1 5133 6150 -5 256 223 124 58 chr5 107016655 107016776 -92613374 - L1ME LINE L1 -480 5641 5513 1278 93 0 0 chr5 107016887 107017070 -92613080 + L1MA2 LINE L1 6121 6303 -1 227 200 0 0 chr5 107017073 107017123 -92613027 + A-rich Low_complexity Low_complexity 1 50 0 203 172 52 0 chr5 107018570 107018628 -92611522 + (TA)n Simple_repeat Simple_repeat 2 62 0 479 271 25 0 chr5 107018724 107018846 -92611304 + FLAM_A SINE Alu 1 125 -8 4833 216 62 25 chr5 107018978 107020405 -92609745 + L1MC3 LINE L1 5101 5403 -743 3706 212 46 17 chr5 107020419 107021309 -92608841 + L1MC3 LINE L1 6745 7660 -125 196 291 55 55 chr5 107021924 107022034 -92608116 + L3 LINE CR1 1396 1505 -72 185 260 20 20 chr5 107022243 107022293 -92607857 + L3b LINE CR1 1528 1577 -6 21 82 0 0 chr5 107022387 107022436 -92607714 + AT_rich Low_complexity Low_complexity 1 49 0 1261 353 231 0 chr5 107023137 107023562 -92606588 - L1MA9 LINE L1 -141 6171 5649 252 133 44 0 chr5 107023606 107023651 -92606499 - L1MA9 LINE L1 -852 5482 5436 1465 137 33 83 chr5 107023683 107023983 -92606167 - AluJb SINE Alu -19 293 9 1637 181 56 40 chr5 107024032 107024408 -92605742 - L1PA16 LINE L1 -16 6150 5769 13106 225 21 39 chr5 107024428 107026829 -92603321 - L1PA16 LINE L1 0 7604 5160 853 114 7 29 chr5 107026829 107026969 -92603181 - L1PA14 LINE L1 -9 6152 6016 13106 225 21 39 chr5 107026969 107030057 -92600093 - L1PA16 LINE L1 -2444 5160 2182 595 372 41 40 chr5 107030510 107031118 -92599032 - L1PA16 LINE L1 -6177 1397 789 1002 196 15 5 chr5 107031127 107031326 -92598824 - L1P4 LINE L1 -384 5782 5582 2012 184 62 13 chr5 107031326 107031710 -92598440 + MSTB LTR MaLR 1 403 -23 1281 171 31 18 chr5 107031710 107031938 -92598212 + MER1B DNA MER1_type 1 231 -66 280 246 101 45 chr5 107032038 107032217 -92597933 + MER67D LTR ERV1 13 201 -313 1704 167 21 9 chr5 107032271 107032601 -92597549 + L1MA9 LINE L1 5977 6310 -2 284 218 0 0 chr5 107032642 107032697 -92597453 + MER3 DNA MER1_type 36 90 -119 * 1078 147 30 20 chr5 107032664 107032861 -92597289 - MER3 DNA MER1_type -10 199 1 1154 180 21 17 chr5 107033021 107033254 -92596896 + MER67C LTR ERV1 170 403 -307 290 271 203 8 chr5 107033264 107033397 -92596753 + MER67D LTR ERV1 356 514 0 327 252 61 9 chr5 107033402 107033517 -92596633 - L1MCa LINE L1 -6304 122 2 * 774 277 83 41 chr5 107033511 107033675 -92596475 + L1M4 LINE L1 2610 2766 -3380 2060 132 3 3 chr5 107033675 107033979 -92596171 + AluSc SINE Alu 1 304 -5 774 277 83 41 chr5 107033979 107034036 -92596114 + L1M4 LINE L1 2766 2819 -3327 2231 88 0 0 chr5 107034036 107034351 -92595799 + AluY SINE Alu 1 315 0 774 277 83 41 chr5 107034351 107034610 -92595540 + L1M4 LINE L1 2819 3112 -3034 393 284 0 0 chr5 107035580 107035675 -92594475 + MER34 LTR ERV1 144 238 -304 742 228 76 19 chr5 107035709 107035920 -92594230 + MER34 LTR ERV1 320 542 0 198 308 51 13 chr5 107036092 107036170 -92593980 + MIR3 SINE MIR 125 205 -3 344 291 20 61 chr5 107037288 107037436 -92592714 - L2 LINE L2 -1 3312 3171 22 0 0 0 chr5 107037555 107037577 -92592573 + AT_rich Low_complexity Low_complexity 1 22 0 21 82 0 0 chr5 107037770 107037819 -92592331 + AT_rich Low_complexity Low_complexity 1 49 0 3238 186 2 3 chr5 107037861 107038467 -92591683 - MER6A DNA MER2_type 0 605 1 1801 178 28 50 chr5 107038657 107039056 -92591094 - MLT1B LTR MaLR 0 390 1 226 188 0 31 chr5 107039059 107039123 -92591027 + CT-rich Low_complexity Low_complexity 2 63 0 20075 75 7 2 chr5 107039598 107043575 -92586575 - L1PA6 LINE L1 0 6154 2147 2016 143 0 0 chr5 107043647 107043948 -92586202 - AluSx SINE Alu -11 301 1 22 80 0 0 chr5 107043991 107044041 -92586109 + AT_rich Low_complexity Low_complexity 1 50 0 855 292 61 39 chr5 107044755 107044919 -92585231 - LTR33A LTR ERVL 0 523 364 3272 175 46 11 chr5 107044919 107045588 -92584562 - L1MA9 LINE L1 -1 6311 5619 855 292 61 39 chr5 107045588 107045934 -92584216 - LTR33A LTR ERVL -159 364 2 12762 174 26 17 chr5 107046364 107049691 -92580459 - L1MA2 LINE L1 -382 5922 2561 1385 198 0 4 chr5 107049694 107049932 -92580218 + MSTC LTR MaLR 192 428 0 1600 263 70 46 chr5 107049944 107051105 -92579045 + L1M1 LINE L1 1126 2423 -3959 2321 93 0 0 chr5 107051105 107051406 -92578744 + AluY SINE Alu 1 301 -10 1600 263 70 46 chr5 107051406 107051598 -92578552 + L1M1 LINE L1 2423 2609 -3773 686 233 18 2 chr5 107051602 107051773 -92578377 + MLT1A1 LTR MaLR 211 365 0 2549 215 31 23 chr5 107051773 107052471 -92577679 + L1M1 LINE L1 3858 4561 -1821 932 249 42 75 chr5 107052487 107052932 -92577218 + L1M3f LINE L1 14 554 -4774 7217 42 7 2 chr5 107053004 107053952 -92576198 + L1PA7 LINE L1 5200 6151 -3 26 0 0 0 chr5 107053952 107053978 -92576172 + AT_rich Low_complexity Low_complexity 1 26 0 30 27 0 0 chr5 107054849 107054886 -92575264 + AT_rich Low_complexity Low_complexity 1 37 0 2038 138 19 26 chr5 107056610 107056988 -92573162 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr5 107057512 107057542 -92572608 + AT_rich Low_complexity Low_complexity 1 30 0 554 307 39 79 chr5 107057809 107058190 -92571960 - MLT1I LTR MaLR -24 385 20 12579 199 44 23 chr5 107058304 107059525 -92570625 + L1PA13 LINE L1 1 1194 -5620 212 59 29 0 chr5 107059525 107059559 -92570591 + (CTG)n Simple_repeat Simple_repeat 2 36 0 12579 199 44 23 chr5 107059559 107061115 -92569035 + L1PA13 LINE L1 1194 2715 -4099 12579 200 20 1 chr5 107061115 107062590 -92567560 + L1PA13 LINE L1 3108 4553 -2261 2229 78 0 39 chr5 107062590 107062897 -92567253 + AluY SINE Alu 1 295 -16 12579 200 20 1 chr5 107062897 107065106 -92565044 + L1PA13 LINE L1 4553 6812 -2 12579 199 44 23 chr5 107065106 107065137 -92565013 + L1PA13 LINE L1 2715 6812 -2 1119 166 10 10 chr5 107066579 107066778 -92563372 - MLT1C LTR MaLR 0 467 269 1869 109 17 17 chr5 107066802 107067104 -92563046 + L1PA14 LINE L1 5859 6160 -1 374 284 0 0 chr5 107067230 107067339 -92562811 - L1M4 LINE L1 -3755 2889 2781 453 249 107 5 chr5 107067390 107067587 -92562563 - L1M4 LINE L1 -4834 1708 1492 1576 274 84 40 chr5 107068188 107068946 -92561204 + L1ME1 LINE L1 5327 6118 -48 1189 219 0 5 chr5 107069090 107069305 -92560845 + MER8 DNA MER2_type 1 214 -25 21 36 0 0 chr5 107069614 107069642 -92560508 + AT_rich Low_complexity Low_complexity 1 28 0 324 318 92 73 chr5 107069816 107070253 -92559897 - L2 LINE L2 -47 3266 2822 192 208 19 57 chr5 107070675 107070728 -92559422 - L3b LINE CR1 -184 1399 1349 2402 57 0 0 chr5 107070780 107071078 -92559072 + AluY SINE Alu 1 298 -13 22 35 0 0 chr5 107071242 107071271 -92558879 + AT_rich Low_complexity Low_complexity 1 29 0 5348 137 46 69 chr5 107171600 107172035 -92458115 + L1M1 LINE L1 2211 2654 -4911 2120 133 7 0 chr5 107172035 107172343 -92457807 + AluSx SINE Alu 1 310 -2 5348 137 46 69 chr5 107172343 107173142 -92457008 + L1M1 LINE L1 2654 3417 -4148 293 250 98 53 chr5 107174704 107174836 -92455314 + MIR SINE MIR 48 185 -77 1527 161 76 10 chr5 107174917 107175208 -92454942 - AluJb SINE Alu -2 310 1 428 178 42 51 chr5 107175264 107175382 -92454768 + MER112 DNA MER1_type 31 147 -113 446 240 32 32 chr5 107175383 107175508 -92454642 + L2 LINE L2 3176 3300 -13 2113 124 0 0 chr5 107175612 107175921 -92454229 - AluSx SINE Alu 0 309 1 2506 84 62 0 chr5 107176102 107176457 -92453693 + MER51B LTR ERV1 1 377 0 676 282 14 38 chr5 107177368 107177655 -92452495 + HAL1b LINE L1 275 554 -794 507 179 0 0 chr5 107177931 107178009 -92452141 - MER2 DNA MER2_type 0 345 268 1074 161 31 0 chr5 107178040 107178232 -92451918 - MER2 DNA MER2_type -136 209 12 331 229 31 31 chr5 107178369 107178465 -92451685 - Zaphod DNA AcHobo 0 4031 3936 7503 27 0 0 chr5 107180045 107181305 -92448845 - L1PA3 LINE L1 -15 6140 4880 414 351 14 67 chr5 107181366 107181574 -92448576 - MER115 DNA AcHobo -318 375 179 677 310 40 35 chr5 107181725 107182344 -92447806 + L1ME3 LINE L1 5255 5890 -280 277 333 39 32 chr5 107182660 107182816 -92447334 - MLT1L LTR MaLR -416 199 43 389 332 62 42 chr5 107182936 107183134 -92447016 - L2 LINE L2 -831 2483 2275 2299 100 0 0 chr5 107183134 107183425 -92446725 + AluY SINE Alu 5 295 -16 389 332 62 42 chr5 107183425 107183533 -92446617 - L2 LINE L2 -1039 2275 2171 359 269 51 102 chr5 107183695 107183911 -92446239 - HAL1b LINE L1 -1140 208 4 1922 144 37 3 chr5 107184037 107184336 -92445814 - AluSx SINE Alu -3 309 1 403 298 155 18 chr5 107185264 107185593 -92444557 + L1MC/D LINE L1 5299 5672 -2136 33 25 0 0 chr5 107185663 107185703 -92444447 + AT_rich Low_complexity Low_complexity 1 40 0 4016 192 16 33 chr5 107187002 107187961 -92442189 + L1M2 LINE L1 1438 2379 -4470 183 261 225 27 chr5 107188346 107188457 -92441693 + MIR SINE MIR 122 254 -8 221 232 0 80 chr5 107188853 107188991 -92441159 + (CATA)n Simple_repeat Simple_repeat 2 128 0 23 33 0 0 chr5 107189162 107189192 -92440958 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr5 107189421 107189458 -92440692 + AT_rich Low_complexity Low_complexity 1 37 0 8440 223 51 34 chr5 107189504 107190769 -92439381 - L1MD1 LINE L1 -326 6310 5069 1678 155 120 23 chr5 107190769 107191111 -92439039 + THE1C LTR MaLR 1 375 0 8440 223 51 34 chr5 107191111 107192297 -92437853 - L1MD1 LINE L1 -1567 5069 3905 587 90 0 0 chr5 107192297 107192375 -92437775 + MADE1 DNA Mariner 1 78 -2 8440 223 51 34 chr5 107192375 107193889 -92436261 - L1MD1 LINE L1 -2731 3905 2297 2616 251 112 22 chr5 107193882 107194689 -92435461 - L1MD1 LINE L1 -5498 1042 164 * 424 321 55 44 chr5 107194785 107195078 -92435072 + ERVL LTR ERVL 4900 5195 -569 445 78 52 0 chr5 107195720 107195797 -92434353 + GA-rich Low_complexity Low_complexity 4 84 0 365 342 72 54 chr5 107195771 107196367 -92433783 - L2 LINE L2 -1209 2105 1499 * 1077 62 0 0 chr5 107196536 107196664 -92433486 + AluSg SINE Alu 3 130 -180 2511 62 7 0 chr5 107196667 107196976 -92433174 + AluY SINE Alu 1 311 0 488 279 107 37 chr5 107197994 107198336 -92431814 - MLT1J LTR MaLR -80 535 60 219 36 0 0 chr5 107198336 107198364 -92431786 + (CAA)n Simple_repeat Simple_repeat 2 29 0 488 279 107 37 chr5 107198364 107198429 -92431721 - MLT1J LTR MaLR -555 60 1 1404 175 58 8 chr5 107198612 107198869 -92431281 + AluJb SINE Alu 27 296 -16 339 322 20 20 chr5 107199194 107199343 -92430807 - MIR SINE MIR 0 262 114 34 0 0 0 chr5 107199908 107199942 -92430208 + AT_rich Low_complexity Low_complexity 1 34 0 36 23 0 0 chr5 107200143 107200186 -92429964 + AT_rich Low_complexity Low_complexity 1 43 0 351 286 91 36 chr5 107200341 107200531 -92429619 - L1ME3A LINE L1 -225 5945 5736 2502 51 0 0 chr5 107200531 107200826 -92429324 - AluY SINE Alu -16 295 1 351 286 91 36 chr5 107200826 107200887 -92429263 - L1ME3A LINE L1 -434 5736 5680 215 157 20 0 chr5 107200928 107200979 -92429171 + (CATA)n Simple_repeat Simple_repeat 1 52 0 5031 198 80 10 chr5 107201061 107202161 -92427989 + L1 LINE L1 15 1191 -6374 4799 200 15 3 chr5 107202284 107203537 -92426613 + L1 LINE L1 3387 4656 -2909 2886 180 6 0 chr5 107203530 107204080 -92426070 + L1 LINE L1 6104 6656 -909 * 334 141 31 0 chr5 107204812 107204876 -92425274 + MLT1D LTR MaLR 440 505 0 274 257 122 0 chr5 107204966 107205040 -92425110 + MLT1I LTR MaLR 71 153 -256 553 43 0 0 chr5 107205600 107205670 -92424480 - L1PA5 LINE L1 -6 6148 6079 1653 202 113 44 chr5 107205938 107206442 -92423708 + LTR55 LTR ERV 1 539 -9 1565 182 16 35 chr5 107206631 107206949 -92423201 - AluJo SINE Alu 0 312 1 380 277 95 34 chr5 107207067 107207215 -92422935 + MIR SINE MIR 2 158 -104 396 164 0 0 chr5 107207224 107207291 -92422859 - MLT1F LTR MaLR 0 567 501 * 626 266 51 0 chr5 107207286 107207463 -92422687 - MLT1F LTR MaLR -12 530 345 11414 32 5 1 chr5 107207614 107209607 -92420543 - L1PA3 LINE L1 -161 5994 3997 4253 41 0 0 chr5 107209604 107210119 -92420031 + L1P LINE L1 3559 4073 -2073 * 3057 203 106 39 chr5 107210114 107211310 -92418840 + L1MB2 LINE L1 4892 6169 -2 * 3544 175 68 48 chr5 107211833 107212014 -92418136 - MER21A LTR ERV1 -9 922 746 2058 130 20 20 chr5 107212014 107212369 -92417781 - THE1A LTR MaLR 0 355 1 10916 104 13 3 chr5 107212369 107213933 -92416217 - THE1A-int LTR MaLR 0 1580 1 2224 111 20 11 chr5 107213933 107214285 -92415865 - THE1A LTR MaLR 0 355 1 3544 175 68 48 chr5 107214285 107214957 -92415193 - MER21A LTR ERV1 -184 747 9 216 162 0 0 chr5 107214957 107214994 -92415156 + (TG)n Simple_repeat Simple_repeat 2 38 0 1915 190 20 0 chr5 107215239 107215597 -92414553 - MER47A DNA MER2_type 0 366 2 21 0 0 0 chr5 107215858 107215879 -92414271 + AT_rich Low_complexity Low_complexity 1 21 0 409 227 57 23 chr5 107216606 107216694 -92413456 + Tigger3(Golem) DNA MER2_type 1 91 -2938 * 3993 116 27 147 chr5 107216693 107216865 -92413285 + Tigger3(Golem) DNA MER2_type 1925 2116 -913 1591 169 95 0 chr5 107216865 107217149 -92413001 + AluSx SINE Alu 1 311 -1 3993 116 27 147 chr5 107217149 107217947 -92412203 + Tigger3(Golem) DNA MER2_type 2116 2778 -251 571 131 180 41 chr5 107217948 107218070 -92412080 + Tigger3(Golem) DNA MER2_type 2889 3027 -2 504 128 108 39 chr5 107218213 107218315 -92411835 - Tigger3(Golem) DNA MER2_type -2 3027 2919 2243 173 90 34 chr5 107218335 107218833 -92411317 - Tigger3(Golem) DNA MER2_type -2503 526 1 586 199 0 0 chr5 107219000 107219127 -92411023 - L1P LINE L1 -807 5349 5223 1428 132 13 0 chr5 107219127 107219355 -92410795 + L1P4 LINE L1 5388 5618 -547 27 29 0 0 chr5 107220317 107220351 -92409799 + AT_rich Low_complexity Low_complexity 1 34 0 1240 144 7 78 chr5 107220474 107220611 -92409539 + AluSx SINE Alu 1 111 -201 1953 139 3 0 chr5 107220611 107220906 -92409244 + AluSx SINE Alu 1 296 -16 1240 144 7 78 chr5 107220906 107221039 -92409111 + AluSx SINE Alu 111 252 -60 2128 117 0 9 chr5 107222694 107223010 -92407140 + AluSq SINE Alu 1 313 0 505 195 153 9 chr5 107224319 107224473 -92405677 + MSTB1 LTR MaLR 1 199 -231 594 176 92 0 chr5 107224473 107224592 -92405558 + FLAM_C SINE Alu 1 130 -13 1174 159 52 17 chr5 107224592 107224824 -92405326 + MSTB1 LTR MaLR 193 432 0 295 312 252 12 chr5 107225795 107226128 -92404022 - L2 LINE L2 -3 3310 2898 492 294 193 14 chr5 107226171 107226596 -92403554 - L2 LINE L2 -505 2809 2309 286 318 32 16 chr5 107226656 107226782 -92403368 - L1ME LINE L1 -475 5646 5519 185 295 148 74 chr5 107226929 107226965 -92403185 - MIR3 SINE MIR -21 187 155 2054 109 0 50 chr5 107226965 107227286 -92402864 + AluSg SINE Alu 1 305 -5 185 295 148 74 chr5 107227286 107227371 -92402779 - MIR3 SINE MIR -53 155 57 26 74 0 0 chr5 107227716 107227770 -92402380 + AT_rich Low_complexity Low_complexity 1 54 0 2200 112 0 0 chr5 107229233 107229536 -92400614 + AluSx SINE Alu 1 303 -9 402 134 0 0 chr5 107229546 107229613 -92400537 + (TG)n Simple_repeat Simple_repeat 2 68 0 291 278 42 14 chr5 107229660 107229732 -92400418 - MER5A DNA MER1_type -73 116 43 235 304 0 0 chr5 107230452 107230508 -92399642 + L2 LINE L2 3250 3305 -8 300 53 0 0 chr5 107231110 107231148 -92399002 + (TA)n Simple_repeat Simple_repeat 1 38 0 212 77 26 0 chr5 107232556 107232595 -92397555 + (CA)n Simple_repeat Simple_repeat 2 41 0 26 0 0 0 chr5 107233991 107234017 -92396133 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr5 107234045 107234074 -92396076 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr5 107234831 107234869 -92395281 + AT_rich Low_complexity Low_complexity 1 38 0 1421 169 117 11 chr5 107234869 107235142 -92395008 - AluJb SINE Alu -10 302 1 1292 176 69 0 chr5 107235144 107235389 -92394761 - AluJo SINE Alu -16 296 35 579 304 50 45 chr5 107236115 107236555 -92393595 + L1ME2 LINE L1 1094 1535 -4888 * 763 305 66 46 chr5 107236539 107237126 -92393024 + L1ME2 LINE L1 1857 2455 -4667 391 307 69 27 chr5 107237222 107237627 -92392523 + L1ME2 LINE L1 3130 3555 -3386 1043 252 83 54 chr5 107237633 107237716 -92392434 + L1ME2 LINE L1 6411 6490 -469 1642 189 3 0 chr5 107237716 107238002 -92392148 + AluJo SINE Alu 1 287 -25 1043 252 83 54 chr5 107238002 107238414 -92391736 + L1ME2 LINE L1 6490 6920 -39 258 153 0 0 chr5 107238466 107238525 -92391625 + (TA)n Simple_repeat Simple_repeat 1 59 0 1233 172 0 10 chr5 107238532 107238735 -92391415 - AluJb SINE Alu -39 273 73 37 76 0 0 chr5 107238832 107238911 -92391239 + AT_rich Low_complexity Low_complexity 1 79 0 1337 25 0 0 chr5 107239023 107239180 -92390970 + L1PA4 LINE L1 5769 5925 -230 482 184 0 11 chr5 107239180 107239267 -92390883 - AluJb SINE Alu -226 86 1 796 252 92 28 chr5 107239278 107239603 -92390547 - L1ME3A LINE L1 -72 6098 5753 2020 142 3 0 chr5 107239603 107239912 -92390238 - AluSq SINE Alu -1 312 3 1636 265 107 11 chr5 107239915 107240936 -92389214 - L1ME3A LINE L1 -777 5387 4263 392 222 43 43 chr5 107240939 107241056 -92389094 + L1ME3A LINE L1 6046 6162 -8 836 238 0 30 chr5 107241450 107241652 -92388498 + MER3 DNA MER1_type 13 208 -1 5170 202 54 11 chr5 107241786 107243714 -92386436 - L1MA8 LINE L1 -7 7703 5667 387 205 6 30 chr5 107243718 107243884 -92386266 + (TA)n Simple_repeat Simple_repeat 2 163 0 219 171 24 0 chr5 107243901 107243942 -92386208 + (TATATG)n Simple_repeat Simple_repeat 5 46 0 4783 212 28 10 chr5 107243942 107245110 -92385040 - L1MA8 LINE L1 -1903 5662 4474 2661 234 56 76 chr5 107245107 107245730 -92384420 - L1MA8 LINE L1 -3949 3616 2982 * 556 90 13 0 chr5 107245730 107245808 -92384342 - MER51B LTR ERV1 -83 294 216 2661 234 56 76 chr5 107245808 107246653 -92383497 - L1MA8 LINE L1 -4583 2982 2295 662 188 0 83 chr5 107246653 107246806 -92383344 - FLAM_A SINE Alu 0 142 2 2661 234 56 76 chr5 107246806 107246948 -92383202 - L1MA8 LINE L1 -5270 2295 2152 1953 266 113 51 chr5 107246956 107247973 -92382177 - L1MA8 LINE L1 -5950 1539 460 183 261 0 22 chr5 107247998 107248044 -92382106 - MER5A DNA MER1_type -107 82 38 254 412 0 0 chr5 107248617 107248736 -92381414 - MIR3 SINE MIR -5 203 85 220 211 268 0 chr5 107248809 107248880 -92381270 - L2 LINE L2 -2 3311 3222 884 194 72 0 chr5 107249171 107249351 -92380799 - AluJ SINE Alu 0 312 120 194 389 97 6 chr5 107250390 107250719 -92379431 + L2 LINE L2 2344 2702 -612 650 168 8 32 chr5 107250751 107250876 -92379274 - AluJ SINE Alu -180 122 1 605 203 0 8 chr5 107252225 107252343 -92377807 + LTR33 LTR ERVL 14 130 -391 305 299 37 15 chr5 107252508 107252642 -92377508 + LTR33 LTR ERVL 385 521 0 23 33 0 0 chr5 107252780 107252810 -92377340 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr5 107253110 107253136 -92377014 + AT_rich Low_complexity Low_complexity 1 26 0 459 331 131 58 chr5 107253691 107254360 -92375790 + L2 LINE L2 2346 3071 -201 221 164 18 36 chr5 107255292 107255347 -92374803 + (CATAT)n Simple_repeat Simple_repeat 2 55 0 719 274 66 16 chr5 107255361 107255679 -92374471 + L1MC4a LINE L1 5717 6050 -1758 7270 40 1 0 chr5 107255860 107256744 -92373406 - L1PA4 LINE L1 -4 6151 5267 4746 39 0 0 chr5 107256844 107257849 -92372301 - L1PA5 LINE L1 -329 5825 4821 227 356 43 12 chr5 107257939 107258102 -92372048 - L1M4 LINE L1 -1487 4659 4492 417 256 26 0 chr5 107258163 107258280 -92371870 - L1MD2 LINE L1 -17 6342 6223 694 230 149 28 chr5 107258283 107258531 -92371619 - MSTC LTR MaLR -130 298 21 234 359 62 20 chr5 107259459 107259654 -92370496 + L2 LINE L2 2312 2514 -800 2022 107 21 3 chr5 107259663 107259952 -92370198 - AluSx SINE Alu -18 294 1 21 0 0 0 chr5 107260579 107260600 -92369550 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr5 107261419 107261442 -92368708 + (TG)n Simple_repeat Simple_repeat 2 24 0 584 234 35 86 chr5 107261663 107261953 -92368197 - ORSL DNA AcHobo 0 275 1 21 36 0 0 chr5 107262271 107262299 -92367851 + AT_rich Low_complexity Low_complexity 1 28 0 1015 301 72 42 chr5 107262318 107263107 -92367043 - L2 LINE L2 0 3313 2497 691 322 129 12 chr5 107263146 107263401 -92366749 - LTR33 LTR ERVL -236 285 1 1246 304 76 16 chr5 107263438 107263951 -92366199 - L2 LINE L2 -2293 1021 478 1396 250 88 0 chr5 107263951 107264279 -92365871 - MSTD LTR MaLR 0 396 40 644 266 96 0 chr5 107264401 107264619 -92365531 + MER46C DNA MER2_type 2 240 -98 333 316 21 0 chr5 107264755 107264850 -92365300 - L2 LINE L2 -2 3311 3215 233 181 24 36 chr5 107264887 107264970 -92365180 + (TTTA)n Simple_repeat Simple_repeat 3 84 0 255 223 43 53 chr5 107265104 107265198 -92364952 - L1ME LINE L1 -459 5662 5570 2208 98 0 35 chr5 107265212 107265529 -92364621 + AluY SINE Alu 1 306 -5 1090 269 109 37 chr5 107266227 107267502 -92362648 + L1MEc LINE L1 1544 2935 -3605 398 277 56 45 chr5 107267513 107267946 -92362204 + L1MEc LINE L1 789 1188 -5017 244 254 45 0 chr5 107267962 107268029 -92362121 + MLT1E3 LTR MaLR 1 70 -584 2432 148 33 35 chr5 107268049 107268535 -92361615 + MER66B LTR ERV1 2 486 0 1576 289 29 26 chr5 107268566 107269019 -92361131 + MLT1E3 LTR MaLR 140 593 -31 1482 141 67 37 chr5 107269019 107269318 -92360832 - MER44D DNA MER2_type 0 609 32 265 252 102 27 chr5 107269423 107269570 -92360580 + L1MEc LINE L1 1282 1439 -4776 235 235 49 25 chr5 107269611 107269692 -92360458 + L1MEc LINE L1 1545 1627 -4588 22 56 0 0 chr5 107270457 107270493 -92359657 + AT_rich Low_complexity Low_complexity 1 36 0 2206 122 228 18 chr5 107270982 107271433 -92358717 - MER52C LTR ERV1 0 1278 733 315 49 0 0 chr5 107272222 107272263 -92357887 + (TG)n Simple_repeat Simple_repeat 2 42 0 1836 166 0 0 chr5 107272272 107272561 -92357589 - AluJb SINE Alu -23 289 1 1190 72 0 30 chr5 107272576 107272743 -92357407 + MER4E LTR ERV1 1 162 -617 1686 191 0 16 chr5 107272862 107273176 -92356974 + AluJb SINE Alu 4 312 0 35 63 0 0 chr5 107273311 107273374 -92356776 + AT_rich Low_complexity Low_complexity 1 63 0 525 214 83 0 chr5 107273636 107273781 -92356369 - L1MA10 LINE L1 -1 6333 6177 385 217 132 33 chr5 107273807 107273959 -92356191 - L1ME1 LINE L1 -132 6270 6104 1341 246 86 10 chr5 107273971 107274697 -92355453 - L1ME1 LINE L1 -484 5918 5138 5429 204 21 15 chr5 107274701 107274996 -92355154 + L1PB4 LINE L1 4074 4366 -1790 1748 167 0 3 chr5 107274996 107275283 -92354867 + AluSq SINE Alu 1 286 -27 5429 204 21 15 chr5 107275283 107275296 -92354854 + L1PB4 LINE L1 4366 4377 -1779 318 26 0 0 chr5 107275296 107275335 -92354815 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 5429 204 21 15 chr5 107275335 107276722 -92353428 + L1PB4 LINE L1 4377 5788 -368 192 97 0 0 chr5 107276722 107276753 -92353397 + (TA)n Simple_repeat Simple_repeat 1 31 0 5429 204 21 15 chr5 107276753 107277124 -92353026 + L1PB4 LINE L1 5788 6155 -1 1415 257 76 25 chr5 107277132 107278095 -92352055 - L1ME1 LINE L1 -3386 2996 1931 431 219 10 0 chr5 107278195 107278291 -92351859 - L1ME1 LINE L1 -4603 1960 1864 1438 98 31 18 chr5 107278293 107278517 -92351633 + AluSq SINE Alu 69 295 -18 548 280 88 34 chr5 107278524 107278702 -92351448 - L1ME1 LINE L1 -4725 1659 1492 209 81 0 27 chr5 107278702 107278739 -92351411 + (TATATG)n Simple_repeat Simple_repeat 2 37 0 548 280 88 34 chr5 107278739 107279092 -92351058 - L1ME1 LINE L1 -4892 1492 1179 233 333 52 47 chr5 107279597 107279810 -92350340 - L1ME1 LINE L1 -5855 517 304 210 171 0 0 chr5 107281080 107281121 -92349029 + GA-rich Low_complexity Low_complexity 3 43 0 12834 127 6 28 chr5 107281354 107284508 -92345642 + L1P3 LINE L1 27 3176 -3285 2011 131 17 7 chr5 107284757 107285054 -92345096 + AluSx SINE Alu 1 300 -12 219 204 0 0 chr5 107285085 107285139 -92345011 + (TA)n Simple_repeat Simple_repeat 1 54 0 40 87 0 0 chr5 107285429 107285532 -92344618 + AT_rich Low_complexity Low_complexity 1 103 0 1701 197 25 29 chr5 107285566 107285925 -92344225 + MLT2C1 LTR ERVL 1 472 -48 1708 93 19 8 chr5 107285965 107286223 -92343927 - L1PB2 LINE L1 0 6151 5891 506 291 26 7 chr5 107286347 107286498 -92343652 + MIR SINE MIR 47 200 -62 420 294 61 29 chr5 107286536 107286781 -92343369 + Charlie2 DNA MER1_type 72 324 -2538 548 205 55 0 chr5 107286787 107286914 -92343236 + Charlie2 DNA MER1_type 1856 1989 -873 30 45 0 0 chr5 107286998 107287042 -92343108 + AT_rich Low_complexity Low_complexity 1 44 0 687 234 120 5 chr5 107287067 107287251 -92342899 - MLT1G1 LTR MaLR -390 205 1 406 275 18 9 chr5 107287876 107287985 -92342165 - MER81 DNA DNA 0 114 5 417 204 48 34 chr5 107288134 107288281 -92341869 + LTR37B LTR ERV1 1 149 -319 512 214 51 74 chr5 107288400 107288657 -92341493 + LTR37B LTR ERV1 205 455 -13 286 379 118 6 chr5 107289929 107290098 -92340052 + L2 LINE L2 2860 3047 -225 2076 102 18 0 chr5 107290424 107290707 -92339443 + AluSg SINE Alu 5 292 -18 2409 69 0 7 chr5 107291048 107291353 -92338797 - AluY SINE Alu -8 303 1 23 0 0 0 chr5 107291833 107291856 -92338294 + AT_rich Low_complexity Low_complexity 1 23 0 1939 183 83 21 chr5 107292013 107292445 -92337705 + MER31B LTR ERV1 2 460 -6 2099 131 53 0 chr5 107292717 107293054 -92337096 - THE1A LTR MaLR 0 355 1 11686 97 1 1 chr5 107293054 107294633 -92335517 - THE1A-int LTR MaLR 0 1580 1 1701 122 131 25 chr5 107294633 107294954 -92335196 - THE1A LTR MaLR 0 355 1 1832 137 0 76 chr5 107295206 107295535 -92334615 + AluSc SINE Alu 1 304 -5 416 321 63 0 chr5 107295821 107295980 -92334170 - MIR SINE MIR -31 231 63 322 236 39 55 chr5 107296900 107297027 -92333123 + L1ME LINE L1 5684 5808 -313 579 332 57 9 chr5 107297195 107297424 -92332726 - L1MCc LINE L1 -5345 1078 839 645 280 50 5 chr5 107297755 107297955 -92332195 - L1MCc LINE L1 -6038 385 177 2838 220 68 65 chr5 107298058 107299322 -92330828 + L1ME1 LINE L1 4755 6005 -161 1933 133 0 4 chr5 107299322 107299600 -92330550 + AluSq SINE Alu 1 277 -36 2838 220 68 65 chr5 107299600 107299758 -92330392 + L1ME1 LINE L1 6005 6161 -5 254 283 0 0 chr5 107299761 107299814 -92330336 + polypurine Low_complexity Low_complexity 3 55 0 1271 258 93 38 chr5 107299814 107300341 -92329809 + L1MC4 LINE L1 7482 8037 -5 259 130 22 0 chr5 107300386 107300432 -92329718 + L1M4 LINE L1 4501 4547 -1599 244 337 143 0 chr5 107300705 107300803 -92329347 - L2 LINE L2 0 3272 3161 192 291 51 74 chr5 107301148 107301323 -92328827 - L2 LINE L2 -1532 1782 1612 2908 163 22 81 chr5 107301598 107302330 -92327820 + LTR8 LTR ERV1 1 689 -2 246 32 0 0 chr5 107303297 107303328 -92326822 + (CAA)n Simple_repeat Simple_repeat 2 32 0 428 242 63 99 chr5 107304008 107304231 -92325919 + L1MCc LINE L1 17 231 -6192 366 202 0 32 chr5 107304331 107304425 -92325725 - MLT1A2 LTR MaLR -95 279 189 558 208 62 101 chr5 107304492 107304670 -92325480 - MLT1A2 LTR MaLR -217 173 3 183 156 0 0 chr5 107305628 107305660 -92324490 + GA-rich Low_complexity Low_complexity 3 34 0 344 122 0 0 chr5 107306979 107307028 -92323122 + LTR40a LTR ERVL 1 49 -470 21 36 0 0 chr5 107307146 107307174 -92322976 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 107307892 107307920 -92322230 + AT_rich Low_complexity Low_complexity 1 28 0 252 143 0 0 chr5 107307946 107307988 -92322162 + (TG)n Simple_repeat Simple_repeat 2 43 0 395 318 127 23 chr5 107308265 107308438 -92321712 + MIR SINE MIR 1 191 -71 1704 168 17 14 chr5 107308806 107309098 -92321052 - AluJo SINE Alu -19 293 1 403 315 101 60 chr5 107309453 107309850 -92320300 + MLT1K LTR MaLR 158 570 -18 956 301 0 0 chr5 107310135 107310371 -92319779 + MIR SINE MIR 18 253 -9 2328 80 13 3 chr5 107310394 107310696 -92319454 - AluY SINE Alu -6 305 1 24 32 0 0 chr5 107310738 107310769 -92319381 + AT_rich Low_complexity Low_complexity 1 31 0 230 274 72 139 chr5 107311496 107311704 -92318446 - MIR SINE MIR -25 237 44 393 293 58 32 chr5 107312058 107312246 -92317904 + LTR16C LTR ERVL 296 488 -3 302 337 101 0 chr5 107312916 107313085 -92317065 - MIR SINE MIR 0 262 77 962 208 0 6 chr5 107313610 107313788 -92316362 - MER5B DNA MER1_type -1 177 1 417 260 31 0 chr5 107314582 107314678 -92315472 - MER90 LTR ERV1 0 575 477 8374 154 4 39 chr5 107315351 107316958 -92313192 + L1P LINE L1 3316 4865 -1281 924 135 6 6 chr5 107316958 107317113 -92313037 + L1PA13 LINE L1 6008 6163 0 199 349 0 60 chr5 107317138 107317221 -92312929 + L2 LINE L2 3232 3309 -4 22 56 0 0 chr5 107318287 107318323 -92311827 + AT_rich Low_complexity Low_complexity 1 36 0 665 319 113 44 chr5 107318862 107319411 -92310739 + MLT1K LTR MaLR 2 588 0 219 146 0 0 chr5 107319592 107319633 -92310517 + (TATG)n Simple_repeat Simple_repeat 4 44 0 243 0 0 0 chr5 107321196 107321223 -92308927 + (GA)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr5 107321591 107321614 -92308536 + AT_rich Low_complexity Low_complexity 1 23 0 783 222 6 19 chr5 107322289 107322451 -92307699 + FRAM SINE Alu 1 160 -6 344 45 0 0 chr5 107324346 107324390 -92305760 - L1PA5 LINE L1 -1523 4623 4580 * 7244 39 9 6 chr5 107324388 107325798 -92304352 + L1PA5 LINE L1 4619 6152 -2 774 144 102 24 chr5 107325811 107325992 -92304158 + L1MC1 LINE L1 5932 6130 -36 874 136 111 6 chr5 107325994 107326156 -92303994 + L1MB3 LINE L1 6005 6183 0 885 151 65 0 chr5 107326169 107326354 -92303796 + L1MC2 LINE L1 6136 6332 -12 1981 81 0 8 chr5 107326356 107326616 -92303534 - AluY SINE Alu -15 296 39 192 432 0 0 chr5 107326879 107326960 -92303190 + L2 LINE L2 3156 3236 -36 657 268 33 6 chr5 107327235 107327418 -92302732 + L1ME1 LINE L1 5952 6139 -27 1356 214 33 3 chr5 107327821 107328124 -92302026 - L1ME LINE L1 -558 5608 5297 * 2495 257 67 71 chr5 107328119 107329115 -92301035 - L1M4b LINE L1 -5455 1404 349 921 290 57 0 chr5 107329135 107329397 -92300753 - L1M4b LINE L1 -6563 296 20 2713 171 2 25 chr5 107330710 107331195 -92298955 + MLT2B2 LTR ERVL 2 475 -40 305 98 0 0 chr5 107331222 107331263 -92298887 - MLT2B2 LTR ERVL 0 515 475 1994 235 39 66 chr5 107331973 107332683 -92297467 - LTR8 LTR ERV1 0 691 1 255 283 117 50 chr5 107332752 107332872 -92297278 + MIR SINE MIR 3 130 -132 903 263 31 12 chr5 107333081 107333336 -92296814 + MIR SINE MIR 3 262 0 21 57 0 0 chr5 107333598 107333633 -92296517 + AT_rich Low_complexity Low_complexity 1 35 0 943 230 100 125 chr5 107333728 107334112 -92296038 + MER39 LTR ERV1 5 537 -170 2246 114 0 0 chr5 107334112 107334411 -92295739 + AluSx SINE Alu 1 299 -13 943 230 100 125 chr5 107334411 107334578 -92295572 + MER39 LTR ERV1 537 707 0 324 0 0 0 chr5 107335569 107335605 -92294545 + (TG)n Simple_repeat Simple_repeat 1 36 0 609 276 10 26 chr5 107335820 107336012 -92294138 + LTR41 LTR ERVL 2 190 -583 435 203 40 160 chr5 107336282 107336582 -92293568 + LTR41 LTR ERVL 503 766 -7 26 50 0 0 chr5 107337030 107337070 -92293080 + AT_rich Low_complexity Low_complexity 1 40 0 1775 182 27 32 chr5 107337090 107337463 -92292687 + MLT1A2 LTR MaLR 4 374 0 269 356 93 50 chr5 107337536 107337814 -92292336 + L2 LINE L2 2910 3199 -73 649 172 103 29 chr5 107339517 107339691 -92290459 - L1M4 LINE L1 -1460 4686 4500 1694 234 62 49 chr5 107339692 107340405 -92289745 - L1M4 LINE L1 -1839 4307 3586 344 194 0 0 chr5 107340431 107340493 -92289657 - L1PA6 LINE L1 -5 6149 6088 4283 110 3 0 chr5 107340494 107341094 -92289056 - L1P LINE L1 -5534 612 11 824 207 0 17 chr5 107341112 107341286 -92288864 - L1MCa LINE L1 -5304 1122 952 1599 139 133 7 chr5 107341286 107341595 -92288555 + MSTA LTR MaLR 1 348 -80 4199 123 113 76 chr5 107341595 107342995 -92287155 + pTR5 LTR ERV1 66 2438 0 595 129 0 0 chr5 107342995 107343080 -92287070 + MSTA LTR MaLR 344 428 0 5864 138 29 19 chr5 107343106 107344143 -92286007 - L1MA6 LINE L1 0 6300 5254 243 288 0 25 chr5 107344161 107344241 -92285909 + MLT2E LTR ERVL 58 135 -493 1436 233 114 12 chr5 107347061 107347649 -92282501 - MER114 LTR ERV 0 648 1 2082 226 59 49 chr5 107347662 107348209 -92281941 - MER77 LTR ERV1 0 605 65 388 0 0 0 chr5 107348209 107348252 -92281898 + (TTTA)n Simple_repeat Simple_repeat 2 160 0 2159 106 7 0 chr5 107348252 107348535 -92281615 - AluSp SINE Alu -1 327 1 2082 226 59 49 chr5 107348535 107348583 -92281567 - MER77 LTR ERV1 -539 66 3 24 32 0 0 chr5 107348712 107348743 -92281407 + AT_rich Low_complexity Low_complexity 1 31 0 2134 96 10 7 chr5 107348847 107349138 -92281012 - AluSx SINE Alu -20 292 1 377 336 39 19 chr5 107349557 107349765 -92280385 + ERVL LTR ERVL 465 676 -4978 350 280 40 0 chr5 107350125 107350225 -92279925 + ERVL LTR ERVL 3736 3839 -1925 1452 318 39 15 chr5 107350316 107350929 -92279221 + ERVL LTR ERVL 4028 4655 -1109 275 330 21 0 chr5 107351067 107351161 -92278989 + ERVL LTR ERVL 5307 5402 -362 239 184 0 20 chr5 107351190 107351239 -92278911 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 216 97 0 0 chr5 107352294 107352325 -92277825 + (CAG)n Simple_repeat Simple_repeat 1 31 0 23 68 0 0 chr5 107352722 107352766 -92277384 + AT_rich Low_complexity Low_complexity 1 44 0 256 270 14 0 chr5 107353545 107353619 -92276531 + L1MEc LINE L1 116 190 -6206 1389 276 144 6 chr5 107353636 107354084 -92276066 - L2 LINE L2 -2009 1305 766 1951 144 141 8 chr5 107354084 107354460 -92275690 - MSTA LTR MaLR 0 428 3 1389 276 144 6 chr5 107354460 107354559 -92275591 - L2 LINE L2 -2548 766 682 206 284 0 30 chr5 107355204 107355278 -92274872 + (CATATA)n Simple_repeat Simple_repeat 1 71 0 435 214 188 0 chr5 107355335 107355447 -92274703 - FLAM_A SINE Alu 0 133 1 8698 197 73 25 chr5 107356192 107356804 -92273346 - L1MB3 LINE L1 -19 6164 5583 242 28 0 28 chr5 107356804 107356840 -92273310 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8698 197 73 25 chr5 107356840 107359133 -92271017 - L1MB3 LINE L1 -600 5583 3118 766 282 38 56 chr5 107359516 107359803 -92270347 + LTR33 LTR ERVL 1 282 -239 493 314 47 6 chr5 107359832 107360001 -92270149 + LTR33 LTR ERVL 344 519 -2 2804 153 2 0 chr5 107360659 107361102 -92269048 + L1PBa LINE L1 1162 1605 -5258 * 14352 61 6 3 chr5 107361091 107362973 -92267177 + L1P LINE L1 3162 5049 -1097 5103 200 11 5 chr5 107362970 107364092 -92266058 + L1PBa LINE L1 2929 4057 -2805 * 1063 191 39 5 chr5 107364102 107364306 -92265844 + THE1B LTR MaLR 1 211 -153 851 220 37 11 chr5 107364307 107364498 -92265652 - AluJo SINE Alu -12 300 105 5992 107 18 1 chr5 107364543 107365717 -92264433 + L1PA12 LINE L1 4975 6166 -2 553 331 35 11 chr5 107365772 107366032 -92264118 + ERVL LTR ERVL 5064 5329 -435 851 292 66 36 chr5 107366199 107366531 -92263619 - LTR16C LTR ERVL -27 464 123 1078 324 51 22 chr5 107366783 107367231 -92262919 + LTR33 LTR ERVL 1 461 -60 252 238 86 9 chr5 107367315 107367420 -92262730 - L1M4 LINE L1 -825 5321 5209 5360 152 35 34 chr5 107367535 107367825 -92262325 - L1PB1 LINE L1 0 6151 5863 2402 82 3 0 chr5 107367825 107368131 -92262019 - AluSp SINE Alu -6 307 1 5360 152 35 34 chr5 107368131 107369871 -92260279 - L1PB1 LINE L1 -288 5863 4129 737 327 114 25 chr5 107369900 107370530 -92259620 - L1M4 LINE L1 -1082 5064 4379 486 0 0 0 chr5 107370780 107370834 -92259316 + (TA)n Simple_repeat Simple_repeat 2 55 0 1476 204 6 35 chr5 107372290 107372604 -92257546 - AluJo SINE Alu -5 307 3 687 217 53 0 chr5 107372921 107373073 -92257077 - MER3 DNA MER1_type -49 160 1 768 201 97 0 chr5 107373244 107373398 -92256752 + FRAM SINE Alu 3 171 -5 1460 244 39 15 chr5 107373430 107373836 -92256314 - L1MD3 LINE L1 -170 7825 7410 635 219 7 27 chr5 107373839 107373985 -92256165 - MLT1E LTR MaLR -450 143 1 522 334 161 26 chr5 107374178 107374284 -92255866 - L2 LINE L2 -105 3208 3118 198 71 0 0 chr5 107374284 107374312 -92255838 + (TG)n Simple_repeat Simple_repeat 1 28 0 522 334 161 26 chr5 107374312 107374623 -92255527 - L2 LINE L2 -195 3118 2736 2448 229 78 17 chr5 107374660 107375607 -92254543 - L1MC4 LINE L1 -5 8037 6976 237 365 69 7 chr5 107375673 107375818 -92254332 - L2 LINE L2 -664 2650 2497 241 118 0 0 chr5 107375824 107375858 -92254292 - MLT2D LTR ERVL -8 389 356 285 128 0 0 chr5 107375858 107375905 -92254245 + (TC)n Simple_repeat Simple_repeat 1 47 0 204 40 0 0 chr5 107375905 107375930 -92254220 + (TG)n Simple_repeat Simple_repeat 2 26 0 1536 166 35 54 chr5 107375930 107376303 -92253847 - MLT2D LTR ERVL -48 366 1 12005 36 3 0 chr5 107377283 107378745 -92251405 - L1P LINE L1 -958 5188 3722 246 32 0 0 chr5 107379553 107379584 -92250566 + (TA)n Simple_repeat Simple_repeat 2 32 0 449 295 49 0 chr5 107380100 107380283 -92249867 + L1M4 LINE L1 16 207 -6335 1468 253 75 91 chr5 107380459 107381194 -92248956 + L1M4 LINE L1 487 1209 -5333 1111 176 131 5 chr5 107381216 107381438 -92248712 - AluJb SINE Alu -2 310 61 1761 278 46 47 chr5 107382702 107383413 -92246737 + L1PA12 LINE L1 8 1793 -5788 1680 173 14 10 chr5 107383513 107383808 -92246342 + AluJb SINE Alu 13 308 -4 1239 233 106 48 chr5 107383996 107384429 -92245721 + MLT1J LTR MaLR 41 498 -13 252 308 68 15 chr5 107384471 107384604 -92245546 + L2 LINE L2 2677 2816 -498 481 293 94 45 chr5 107384625 107384891 -92245259 + L2 LINE L2 3003 3281 -32 619 268 82 11 chr5 107384913 107385096 -92245054 - MIR SINE MIR -3 259 64 409 219 84 8 chr5 107385196 107385269 -92244881 - L1ME1 LINE L1 -4 6162 6075 2982 192 20 12 chr5 107385269 107385869 -92244281 + MER6A DNA MER2_type 1 605 0 409 219 84 8 chr5 107385869 107385914 -92244236 - L1ME1 LINE L1 -91 6075 6035 1932 119 39 53 chr5 107386884 107387221 -92242929 + MER1B DNA MER1_type 3 334 -5 336 361 107 0 chr5 107387727 107387896 -92242254 - L3 LINE CR1 -3 1574 1388 260 204 0 0 chr5 107387900 107387954 -92242196 - Charlie1b DNA MER1_type -4 519 466 185 0 0 39 chr5 107387982 107388008 -92242142 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1065 160 125 150 chr5 107388008 107388488 -92241662 - Charlie1b DNA MER1_type -50 473 6 578 353 79 13 chr5 107388492 107388872 -92241278 - L3 LINE CR1 -181 1396 992 476 329 127 14 chr5 107389060 107389352 -92240798 + MLT1J2 LTR MaLR 1 325 -125 811 128 0 183 chr5 107389413 107389648 -92240502 - 7SK RNA RNA 0 193 2 260 335 20 81 chr5 107389678 107389875 -92240275 - L3 LINE CR1 -967 610 426 370 257 173 12 chr5 107389878 107390127 -92240023 - L1MEc LINE L1 -2491 3724 3436 * 1769 232 63 70 chr5 107390096 107390196 -92239954 - L1MEc LINE L1 -3930 2466 2367 198 0 0 0 chr5 107390196 107390218 -92239932 + (TTG)n Simple_repeat Simple_repeat 2 23 0 1913 137 7 0 chr5 107390223 107390500 -92239650 - AluSx SINE Alu -33 279 1 1769 232 63 70 chr5 107390500 107391232 -92238918 - L1MEc LINE L1 -4033 2363 1634 687 274 69 25 chr5 107391237 107391482 -92238668 - L1MEc LINE L1 -5871 525 270 1817 128 26 35 chr5 107391599 107391912 -92238238 - AluSx SINE Alu -2 310 1 15820 222 24 20 chr5 107392122 107393563 -92236587 + L1PA15 LINE L1 1577 3010 -4594 2424 63 0 0 chr5 107393563 107393847 -92236303 + AluY SINE Alu 10 293 -18 15820 222 24 20 chr5 107393847 107396187 -92233963 + L1PA15 LINE L1 3010 5620 -1984 2093 117 7 3 chr5 107396187 107396485 -92233665 + AluSg SINE Alu 1 299 -11 15820 222 24 20 chr5 107396485 107398477 -92231673 + L1PA15 LINE L1 5620 7601 -3 2188 112 3 3 chr5 107400020 107400323 -92229827 - AluY SINE Alu -8 303 1 1105 55 0 0 chr5 107400323 107400451 -92229699 - AluSg SINE Alu -176 134 7 280 241 84 0 chr5 107400609 107400692 -92229458 + MER5A DNA MER1_type 98 187 -2 361 340 77 0 chr5 107400750 107400906 -92229244 - MIR SINE MIR -14 248 81 180 77 0 0 chr5 107400912 107400938 -92229212 + (CA)n Simple_repeat Simple_repeat 1 26 0 24 32 0 0 chr5 107401228 107401259 -92228891 + AT_rich Low_complexity Low_complexity 1 31 0 255 160 19 66 chr5 107401329 107401435 -92228715 + A-rich Low_complexity Low_complexity 5 105 0 451 274 101 30 chr5 107401521 107401849 -92228301 + L1ME LINE L1 4483 4833 -1313 522 227 94 0 chr5 107402455 107402583 -92227567 - MLT1G1 LTR MaLR -7 588 449 2192 138 104 5 chr5 107402585 107403021 -92227129 - MER1A DNA MER1_type 0 529 1 493 269 200 40 chr5 107403021 107403280 -92226870 - MLT1G1 LTR MaLR -171 359 57 381 316 86 37 chr5 107403383 107403692 -92226458 + L1ME LINE L1 5508 5820 -301 277 23 23 23 chr5 107404308 107404351 -92225799 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 22 56 0 0 chr5 107404438 107404474 -92225676 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 107404693 107404722 -92225428 + AT_rich Low_complexity Low_complexity 1 29 0 279 272 120 70 chr5 107404956 107405298 -92224852 - L1MC4a LINE L1 -1893 5915 5557 699 219 94 5 chr5 107405641 107405927 -92224223 - HERVL68 LTR ERVL -35 5495 2796 473 326 62 26 chr5 107405823 107406130 -92224020 - MER89-int LTR ERV1 -309 6492 6175 * 2672 312 75 47 chr5 107406298 107407345 -92222805 - HERVL68 LTR ERVL -2650 2880 1790 2301 91 3 3 chr5 107407345 107407642 -92222508 - AluSp SINE Alu -14 299 3 2672 312 75 47 chr5 107407642 107407839 -92222311 - HERVL68 LTR ERVL -3740 1790 1600 24 53 0 0 chr5 107407860 107407898 -92222252 + AT_rich Low_complexity Low_complexity 1 38 0 385 254 9 53 chr5 107408002 107408116 -92222034 - HERVL68 LTR ERVL -4854 676 568 635 321 1 29 chr5 107408157 107408549 -92221601 - HERVL68 LTR ERVL -4960 570 223 1103 260 44 14 chr5 107408611 107408907 -92221243 - LTR40a LTR ERVL -5 514 210 439 217 156 27 chr5 107409045 107409273 -92220877 + L1MEc LINE L1 2232 2443 -3772 384 187 53 0 chr5 107409256 107409331 -92220819 + L1PA13 LINE L1 1672 1750 -5037 * 1264 187 25 16 chr5 107409326 107414654 -92215496 + L1PA13 LINE L1 1210 6802 -12 1984 139 13 10 chr5 107414991 107415294 -92214856 + AluSx SINE Alu 1 304 -8 219 69 0 0 chr5 107415294 107415323 -92214827 + (TA)n Simple_repeat Simple_repeat 1 29 0 2905 168 6 2 chr5 107415336 107415841 -92214309 - L1MC3 LINE L1 -66 7719 7213 244 213 12 25 chr5 107416009 107416089 -92214061 + T-rich Low_complexity Low_complexity 6 84 0 16513 95 4 2 chr5 107416090 107419051 -92211099 - L1PA8 LINE L1 -228 5944 2976 858 207 25 4 chr5 107419154 107419396 -92210754 - L1 LINE L1 -1590 4556 4310 1084 135 10 10 chr5 107419399 107419592 -92210558 - L1PB2 LINE L1 0 6793 6601 3630 71 0 2 chr5 107419604 107420071 -92210079 - L1PA6 LINE L1 -11 6143 5678 36111 96 12 9 chr5 107420073 107425283 -92204867 - L1PA6 LINE L1 -918 5228 1 14043 223 14 8 chr5 107425281 107429703 -92200447 - L1PB2 LINE L1 -177 6616 2087 * 1427 197 10 2 chr5 107429706 107430142 -92200008 + L1PBa LINE L1 1 981 -5223 21571 147 19 7 chr5 107430161 107430866 -92199284 + MER41-int LTR ERV1 1 696 -7060 306 0 0 0 chr5 107430866 107430900 -92199250 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 21571 147 19 7 chr5 107430900 107433636 -92196514 + MER41-int LTR ERV1 696 3484 -4272 600 64 0 0 chr5 107433639 107433760 -92196390 - AluY SINE Alu 0 325 205 712 164 45 0 chr5 107433861 107433995 -92196155 - AluSg/x SINE Alu -39 271 132 2399 92 0 0 chr5 107433995 107434298 -92195852 - AluSg SINE Alu -7 303 1 4420 188 29 8 chr5 107434311 107435152 -92194998 + MER41-int LTR ERV1 3494 4351 -3405 21755 117 16 7 chr5 107435239 107438474 -92191676 + MER41-int LTR ERV1 4358 7620 -136 1357 137 0 0 chr5 107438478 107438675 -92191475 + MER41C LTR ERV1 69 265 -289 694 222 7 0 chr5 107438756 107438891 -92191259 + L1PBb LINE L1 164 299 -5905 1955 161 18 9 chr5 107438910 107439240 -92190910 + MER41-int LTR ERV1 1 333 -5613 1040 189 64 4 chr5 107439345 107439626 -92190524 - L1M4c LINE L1 -3629 2753 2456 1543 199 44 95 chr5 107439632 107440063 -92190087 - MER47B DNA MER2_type -9 409 1 4933 164 54 17 chr5 107440063 107440276 -92189874 - L1M4 LINE L1 -3927 2457 2253 227 79 26 0 chr5 107440276 107440314 -92189836 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 4933 164 54 17 chr5 107440314 107441136 -92189014 - L1M4 LINE L1 -4131 2253 1384 * 7014 191 20 24 chr5 107441125 107442619 -92187531 - L1M4c LINE L1 -4768 1616 129 765 316 55 4 chr5 107442961 107443214 -92186936 + LTR16C LTR ERVL 212 477 -14 1218 295 60 56 chr5 107443487 107444437 -92185713 + L1MEd LINE L1 364 1317 -4888 329 253 10 10 chr5 107444645 107444744 -92185406 + L1MEd LINE L1 1576 1674 -4722 214 314 14 0 chr5 107444889 107444959 -92185191 + (TAG)n Simple_repeat Simple_repeat 2 72 0 545 317 15 10 chr5 107445334 107445539 -92184611 + L2 LINE L2 3106 3311 -2 1110 114 20 60 chr5 107445780 107445981 -92184169 + L1PA16 LINE L1 5734 5926 -240 1831 136 49 0 chr5 107446024 107446310 -92183840 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr5 107446311 107446333 -92183817 + (GA)n Simple_repeat Simple_repeat 1 22 0 488 280 151 31 chr5 107446438 107446690 -92183460 + MLT1J2 LTR MaLR 37 344 -65 2175 151 27 14 chr5 107446690 107447060 -92183090 - THE1C LTR MaLR 0 375 1 488 280 151 31 chr5 107447060 107447136 -92183014 + MLT1J2 LTR MaLR 344 409 0 6731 73 8 0 chr5 107447960 107449184 -92180966 - L1PA7 LINE L1 -4 6150 4921 223 95 16 79 chr5 107450297 107450360 -92179790 + (TTA)n Simple_repeat Simple_repeat 1 59 0 26 0 0 0 chr5 107450393 107450419 -92179731 + AT_rich Low_complexity Low_complexity 1 26 0 2195 138 97 5 chr5 107452065 107452457 -92177693 - MSTA LTR MaLR 0 428 1 2985 156 76 0 chr5 107452684 107453235 -92176915 + L1PA16 LINE L1 5564 6156 -10 1891 142 3 17 chr5 107453839 107454134 -92176016 + AluJo SINE Alu 1 291 -21 6799 152 31 3 chr5 107455369 107457328 -92172822 + L1PA11 LINE L1 4190 6174 0 303 204 34 27 chr5 107457404 107457551 -92172599 + (TA)n Simple_repeat Simple_repeat 1 148 0 1103 198 68 0 chr5 107457884 107458121 -92172029 - L1MB7 LINE L1 -22 6162 5910 5595 208 26 14 chr5 107458124 107460222 -92169928 + L1MA4 LINE L1 1 2171 -4157 2586 100 14 3 chr5 107460222 107460582 -92169568 + THE1B LTR MaLR 1 364 0 5595 208 26 14 chr5 107460582 107461395 -92168755 + L1MA4 LINE L1 2171 2973 -3355 13284 171 57 21 chr5 107461400 107463203 -92166947 - L1MA2 LINE L1 0 7723 5987 180 0 0 0 chr5 107463203 107463223 -92166927 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 13284 171 57 21 chr5 107463223 107464493 -92165657 - L1MA2 LINE L1 -1736 5987 4765 307 23 68 0 chr5 107464493 107464537 -92165613 + MADE1 DNA Mariner 34 80 0 13284 171 57 21 chr5 107464537 107465383 -92164767 - L1MA2 LINE L1 -2958 4765 3606 200 57 0 29 chr5 107465383 107465418 -92164732 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 13284 171 57 21 chr5 107465418 107465634 -92164516 - L1MA2 LINE L1 -4117 3606 3399 334 60 80 0 chr5 107465634 107465684 -92164466 - MLT2A2 LTR ERVL 0 453 400 180 152 0 0 chr5 107465685 107465718 -92164432 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 273 70 18 18 chr5 107465721 107465778 -92164372 + LTR66 LTR ERVL 383 439 -171 * 2066 167 70 19 chr5 107465768 107466229 -92163921 - MLT2A2 LTR ERVL -40 514 6 1894 75 0 19 chr5 107466234 107466502 -92163648 - HERVL-A2 LTR ERVL 0 5654 5392 1246 196 28 12 chr5 107466542 107466797 -92163353 - L1MA2 LINE L1 -7294 271 13 * 11361 182 26 30 chr5 107466795 107467333 -92162817 + L1MA4 LINE L1 2961 3500 -2982 277 127 0 55 chr5 107467333 107467388 -92162762 + MADE1 DNA Mariner 3 54 -26 11361 182 26 30 chr5 107467388 107470332 -92159818 + L1MA4 LINE L1 3500 6476 -6 3014 186 22 49 chr5 107470342 107470983 -92159167 - L1MB7 LINE L1 -262 5922 5330 3350 155 70 5 chr5 107470983 107471455 -92158695 - L1MA7 LINE L1 -2 6289 5764 270 0 0 0 chr5 107471455 107471485 -92158665 + (TG)n Simple_repeat Simple_repeat 2 31 0 3350 155 70 5 chr5 107471485 107471645 -92158505 - L1MA7 LINE L1 -527 5764 5616 3014 186 22 49 chr5 107471645 107472234 -92157916 - L1MB7 LINE L1 -854 5330 4727 23 33 0 0 chr5 107472247 107472277 -92157873 + AT_rich Low_complexity Low_complexity 1 30 0 550 314 38 17 chr5 107472277 107472592 -92157558 - L1MC5 LINE L1 -885 6978 6614 22 70 0 0 chr5 107472892 107472935 -92157215 + AT_rich Low_complexity Low_complexity 1 43 0 1410 206 35 0 chr5 107473233 107473520 -92156630 - AluJo SINE Alu -15 297 1 275 279 22 84 chr5 107473604 107473962 -92156188 - L1MB7 LINE L1 -1469 4677 4342 1996 124 0 0 chr5 107474040 107474339 -92155811 - AluSx SINE Alu 0 307 9 504 125 23 0 chr5 107474351 107474439 -92155711 - L1MD1 LINE L1 -6 6236 6147 931 204 41 56 chr5 107475833 107476152 -92153998 - MER33 DNA MER1_type -6 318 5 21 36 0 0 chr5 107476476 107476504 -92153646 + AT_rich Low_complexity Low_complexity 1 28 0 800 235 66 14 chr5 107476522 107476735 -92153415 - MER58A DNA MER1_type 0 224 1 28 29 0 0 chr5 107477285 107477320 -92152830 + AT_rich Low_complexity Low_complexity 1 35 0 362 274 133 34 chr5 107478235 107478592 -92151558 - MLT1J LTR MaLR 0 488 127 255 326 75 101 chr5 107478686 107479293 -92150857 - L2 LINE L2 0 3272 2683 227 158 0 0 chr5 107479346 107479384 -92150766 - L2 LINE L2 -8 3305 3268 185 250 19 0 chr5 107482081 107482133 -92148017 - L2 LINE L2 0 3272 3220 401 314 72 24 chr5 107482335 107482542 -92147608 + MIR SINE MIR 11 227 -35 341 316 158 5 chr5 107482584 107482793 -92147357 - MIR SINE MIR -2 260 20 30 0 0 0 chr5 107483752 107483782 -92146368 + AT_rich Low_complexity Low_complexity 1 30 0 1959 211 9 3 chr5 107485160 107485541 -92144609 + MLT2D LTR ERVL 1 481 -39 283 200 36 9 chr5 107485546 107485656 -92144494 + (TA)n Simple_repeat Simple_repeat 2 114 0 310 371 75 29 chr5 107486431 107486711 -92143439 + L3 LINE CR1 3 295 -1282 26 50 0 0 chr5 107486742 107486782 -92143368 + AT_rich Low_complexity Low_complexity 1 40 0 580 330 72 0 chr5 107487027 107487236 -92142914 + MIR SINE MIR 2 225 -37 191 269 28 120 chr5 107487276 107487384 -92142766 + L2 LINE L2 3137 3234 -38 2251 114 5 62 chr5 107488421 107488618 -92141532 - THE1B LTR MaLR 0 364 197 1630 140 0 0 chr5 107488618 107488875 -92141275 - AluSg SINE Alu 0 302 46 2251 114 5 62 chr5 107488875 107489062 -92141088 - THE1B LTR MaLR -167 197 1 11156 105 9 1 chr5 107489062 107490629 -92139521 - THE1B-int LTR MaLR 0 1580 1 2087 142 8 32 chr5 107490629 107491002 -92139148 - THE1B LTR MaLR 0 364 1 920 203 106 36 chr5 107491634 107491935 -92138215 - MER5C DNA MER1_type -1 323 2 284 311 168 31 chr5 107492019 107492180 -92137970 + MIR3 SINE MIR 23 205 -3 360 374 52 12 chr5 107492462 107492711 -92137439 + L3b LINE CR1 1246 1504 -79 297 270 84 47 chr5 107493830 107494045 -92136105 - L1ME4a LINE L1 -68 6036 5814 412 345 28 33 chr5 107494249 107494608 -92135542 - L1ME4a LINE L1 -305 5799 5443 415 291 58 0 chr5 107494837 107495026 -92135124 - L1ME4a LINE L1 -3597 2532 2333 380 288 55 12 chr5 107495079 107495242 -92134908 - L1ME4a LINE L1 -3942 2187 2018 21 71 0 0 chr5 107495405 107495447 -92134703 + AT_rich Low_complexity Low_complexity 1 42 0 327 206 41 41 chr5 107495579 107495676 -92134474 - HAL1 LINE L1 -840 1667 1571 370 280 159 18 chr5 107495773 107496051 -92134099 - L1MEd LINE L1 -4893 1226 1014 768 273 114 51 chr5 107496088 107496597 -92133553 + MLT1H LTR MaLR 5 545 -4 773 247 0 28 chr5 107497538 107497716 -92132434 + MER5B DNA MER1_type 6 178 0 24 0 0 29 chr5 107498848 107498870 -92131280 + AT_rich Low_complexity Low_complexity 1 23 -11 7289 175 2 7 chr5 107498870 107500979 -92129171 - L1PA14 LINE L1 -3 6158 4041 24 0 0 29 chr5 107500979 107500991 -92129159 + AT_rich Low_complexity Low_complexity 23 34 0 423 324 113 14 chr5 107501641 107501854 -92128296 - MIR SINE MIR -1 261 28 2201 112 3 0 chr5 107502127 107502432 -92127718 + AluSp SINE Alu 1 306 -7 1246 109 11 0 chr5 107502432 107502606 -92127544 + AluSq SINE Alu 134 309 -4 204 355 77 41 chr5 107502942 107503111 -92127039 - L2 LINE L2 -2 3270 3096 207 204 0 41 chr5 107503171 107503220 -92126930 - L2 LINE L2 -2 3311 3265 2550 57 0 0 chr5 107503337 107503634 -92126516 + AluY SINE Alu 4 300 -11 761 237 6 12 chr5 107503700 107503873 -92126277 - MIR SINE MIR -42 220 49 848 219 22 0 chr5 107504040 107504223 -92125927 - MER5A DNA MER1_type -1 188 2 190 286 170 35 chr5 107504306 107504477 -92125673 + L2 LINE L2 2301 2494 -820 184 189 27 0 chr5 107504496 107504533 -92125617 - L2 LINE L2 -5 3267 3230 608 294 69 29 chr5 107504607 107504852 -92125298 - MER110 LTR ERV1 -70 421 167 464 229 111 7 chr5 107506587 107506731 -92123419 - Charlie8 DNA MER1_type -2162 255 97 205 222 0 19 chr5 107506731 107506785 -92123365 + A-rich Low_complexity Low_complexity 5 57 0 183 409 66 21 chr5 107506846 107507088 -92123062 + L2 LINE L2 2808 3060 -212 202 225 0 0 chr5 107507424 107507464 -92122686 + L2 LINE L2 3263 3302 -11 8082 165 30 7 chr5 107507567 107509127 -92121023 + L1 LINE L1 3151 4746 -1400 21 0 0 0 chr5 107509357 107509378 -92120772 + AT_rich Low_complexity Low_complexity 1 21 0 12157 174 10 8 chr5 107510295 107511024 -92119126 - L1P LINE L1 -1973 4173 3447 683 83 0 0 chr5 107511024 107511120 -92119030 - L1PA7 LINE L1 0 6154 6059 12157 174 10 8 chr5 107511120 107511881 -92118269 - L1P LINE L1 -2699 3447 2689 2166 148 19 8 chr5 107511881 107512252 -92117898 + THE1C LTR MaLR 1 375 0 12157 174 10 8 chr5 107512252 107513016 -92117134 - L1P LINE L1 -3457 2689 1914 22 88 0 0 chr5 107514478 107514535 -92115615 + AT_rich Low_complexity Low_complexity 1 57 0 267 79 0 0 chr5 107516284 107516322 -92113828 + (CA)n Simple_repeat Simple_repeat 1 38 0 228 246 203 0 chr5 107516790 107516859 -92113291 + L2 LINE L2 3230 3312 -1 209 370 19 19 chr5 107517129 107517237 -92112913 + L2 LINE L2 2706 2813 -501 341 26 0 0 chr5 107517244 107517283 -92112867 + (T)n Simple_repeat Simple_repeat 1 39 0 6730 117 27 25 chr5 107517418 107517735 -92112415 + L1MA2 LINE L1 5019 5334 -970 2274 109 6 6 chr5 107517735 107518047 -92112103 + AluSx SINE Alu 1 312 0 6730 117 27 25 chr5 107518047 107519001 -92111149 + L1MA2 LINE L1 5334 6298 -6 390 307 36 64 chr5 107519119 107519399 -92110751 - MLT1L LTR MaLR -2 613 238 312 70 0 0 chr5 107519921 107519964 -92110186 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 364 305 71 14 chr5 107520110 107520251 -92109899 - L3b LINE CR1 -332 1251 1103 1593 172 24 10 chr5 107521202 107521519 -92108631 + AluJo SINE Alu 1 312 0 375 304 95 30 chr5 107521731 107521899 -92108251 - MIR SINE MIR -30 232 54 572 324 27 58 chr5 107521949 107522279 -92107871 + L2 LINE L2 2124 2443 -871 321 291 25 76 chr5 107522568 107522726 -92107424 + L2 LINE L2 2653 2802 -512 734 238 91 12 chr5 107523319 107523571 -92106579 + MER5C DNA MER1_type 53 324 0 281 254 0 32 chr5 107525226 107525289 -92104861 - 7SK RNA RNA -128 65 5 2923 121 5 2 chr5 107525644 107526073 -92104077 - MER57B LTR ERV1 -4 430 1 196 228 127 38 chr5 107527445 107527524 -92102626 + MIR3 SINE MIR 123 208 0 32 67 0 0 chr5 107527526 107527586 -92102564 + AT_rich Low_complexity Low_complexity 1 60 0 1054 171 0 11 chr5 107527592 107527767 -92102383 - AluJb SINE Alu -17 295 123 319 273 31 31 chr5 107528218 107528346 -92101804 + L1ME LINE L1 272 399 -5671 2135 110 0 13 chr5 107528516 107528816 -92101334 + AluY SINE Alu 1 296 -15 419 279 55 40 chr5 107528889 107529377 -92100773 + L1ME LINE L1 565 960 -5018 2455 119 3 31 chr5 107530156 107530542 -92099608 - THE1C LTR MaLR 0 375 1 28 61 0 0 chr5 107530648 107530697 -92099453 + AT_rich Low_complexity Low_complexity 1 49 0 23 33 0 0 chr5 107531947 107531977 -92098173 + AT_rich Low_complexity Low_complexity 1 30 0 189 411 36 27 chr5 107534930 107535154 -92094996 - L2 LINE L2 -221 3092 2867 694 196 12 52 chr5 107535419 107535592 -92094558 + FRAM SINE Alu 1 166 0 753 303 76 10 chr5 107537417 107537707 -92092443 + LTR16C LTR ERVL 182 490 -1 372 360 100 5 chr5 107538241 107538441 -92091709 + MIR SINE MIR 23 241 -21 290 291 197 8 chr5 107538474 107538591 -92091559 - L2 LINE L2 -1 3271 3133 31 26 0 0 chr5 107538593 107538631 -92091519 + AT_rich Low_complexity Low_complexity 1 38 0 27 0 0 0 chr5 107538672 107538699 -92091451 + AT_rich Low_complexity Low_complexity 1 27 0 5496 108 11 37 chr5 107539865 107540752 -92089398 - L1PB1 LINE L1 -2 6149 5286 2461 216 35 5 chr5 107540749 107541368 -92088782 + L1 LINE L1 2862 3499 -2647 * 2028 61 0 4 chr5 107541380 107541657 -92088493 - L1PA5 LINE L1 -814 5332 5057 6806 38 0 0 chr5 107541657 107542462 -92087688 + L1PA5 LINE L1 5333 6139 -15 7711 210 25 15 chr5 107542622 107543522 -92086628 + L1 LINE L1 3485 4375 -1771 279 0 0 0 chr5 107543522 107543553 -92086597 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 7711 210 25 15 chr5 107543553 107544033 -92086117 + L1 LINE L1 4375 4888 -1258 1896 150 0 32 chr5 107544033 107544347 -92085803 + AluSx SINE Alu 1 304 -8 7711 210 25 15 chr5 107544347 107544763 -92085387 + L1 LINE L1 4888 5299 -847 200 33 0 33 chr5 107544949 107544979 -92085171 + (TTG)n Simple_repeat Simple_repeat 3 31 0 384 296 99 33 chr5 107545414 107545566 -92084584 - MIR3 SINE MIR -36 172 11 328 371 48 22 chr5 107545612 107545841 -92084309 - MIR SINE MIR 0 262 28 355 333 107 49 chr5 107545898 107546123 -92084027 + L2 LINE L2 2549 2786 -528 23 0 0 0 chr5 107546174 107546197 -92083953 + AT_rich Low_complexity Low_complexity 1 23 0 2558 58 0 0 chr5 107546303 107546614 -92083536 - AluY SINE Alu 0 311 1 547 262 6 0 chr5 107546807 107546979 -92083171 + L1M4 LINE L1 3806 3978 -2168 318 50 0 0 chr5 107547368 107547408 -92082742 + (CA)n Simple_repeat Simple_repeat 2 41 0 2414 175 13 15 chr5 107548123 107548585 -92081565 - MER65C LTR ERV1 0 461 1 186 302 19 0 chr5 107548851 107548904 -92081246 - MIR SINE MIR 0 262 209 635 262 58 0 chr5 107548942 107549114 -92081036 - MIR SINE MIR -35 227 46 1168 42 0 0 chr5 107549149 107549293 -92080857 - L1PA4 LINE L1 0 6155 6012 1871 22 4 4 chr5 107549570 107549795 -92080355 - L1PA4 LINE L1 -247 5908 5684 305 24 0 0 chr5 107549795 107549833 -92080317 + L1PA2 LINE L1 6111 6151 -4 240 100 0 0 chr5 107549842 107549882 -92080268 + (A)n Simple_repeat Simple_repeat 1 40 0 8913 159 53 6 chr5 107549981 107552711 -92077439 + L1M1 LINE L1 6 2981 -4584 2880 175 20 77 chr5 107552737 107553319 -92076831 + L1M1 LINE L1 3264 3715 -3850 222 91 0 0 chr5 107553319 107553352 -92076798 + (TA)n Simple_repeat Simple_repeat 1 33 0 2880 175 20 77 chr5 107553352 107554045 -92076105 + L1M1 LINE L1 3715 4446 -3119 270 0 0 0 chr5 107554179 107554209 -92075941 + (A)n Simple_repeat Simple_repeat 1 30 0 585 263 140 11 chr5 107555485 107555664 -92074486 - MIR SINE MIR -5 257 56 988 251 115 21 chr5 107555946 107556276 -92073874 + MER69 DNA AcHobo 27 387 -839 1437 261 86 47 chr5 107556333 107556805 -92073345 + MER69 DNA AcHobo 492 999 -1527 4505 139 23 30 chr5 107556805 107557596 -92072554 + LTR1 LTR ERV1 1 785 0 1437 261 86 47 chr5 107557596 107557786 -92072364 + MER69 DNA AcHobo 999 1180 -1346 736 164 47 18 chr5 107557786 107557957 -92072193 + MER69 DNA AcHobo 2347 2522 -4 659 277 96 60 chr5 107558913 107559278 -92070872 + MLT1J2 LTR MaLR 61 438 -12 209 269 0 19 chr5 107563277 107563329 -92066821 - L2 LINE L2 -14 3299 3249 465 278 107 11 chr5 107563425 107563612 -92066538 - MIR SINE MIR -26 236 32 239 259 48 96 chr5 107564191 107564357 -92065793 - MIR SINE MIR -46 216 59 2277 106 0 3 chr5 107565397 107565699 -92064451 - AluSg SINE Alu -9 301 1 22 56 0 0 chr5 107565761 107565797 -92064353 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 107565990 107566013 -92064137 + AT_rich Low_complexity Low_complexity 1 23 0 211 26 0 53 chr5 107566455 107566493 -92063657 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 287 172 0 17 chr5 107567110 107567168 -92062982 + MLT1A1 LTR MaLR 3 59 -306 40520 35 22 2 chr5 107567181 107573209 -92056941 + L1PA2 LINE L1 3 6155 0 1253 168 4 12 chr5 107573209 107573496 -92056654 + MLT1A1 LTR MaLR 44 365 0 25 31 0 0 chr5 107573901 107573933 -92056217 + AT_rich Low_complexity Low_complexity 1 32 0 377 311 137 19 chr5 107574793 107575005 -92055145 + MIR SINE MIR 20 256 -6 1173 226 81 31 chr5 107576719 107577078 -92053072 + MLT1B LTR MaLR 14 390 0 1631 189 32 53 chr5 107578491 107578871 -92051279 + MLT2B1 LTR ERVL 149 520 0 219 69 0 0 chr5 107578890 107578919 -92051231 + (T)n Simple_repeat Simple_repeat 1 29 0 1205 14 0 0 chr5 107578920 107579059 -92051091 - LTR2B LTR ERV1 -44 446 308 41764 40 2 2 chr5 107579066 107583370 -92046780 - L1PA4 LINE L1 -8 6147 1840 2768 16 0 3 chr5 107583370 107583681 -92046469 + AluYa5 SINE Alu 1 310 -1 41764 40 2 2 chr5 107583681 107585519 -92044631 - L1PA4 LINE L1 -4315 1840 4 386 297 78 8 chr5 107587507 107587635 -92042515 - L2 LINE L2 -2 3270 3134 993 150 18 0 chr5 107588622 107588789 -92041361 + MER84 LTR ERVI 338 507 0 5057 110 13 4 chr5 107588789 107588845 -92041305 + MER84-int LTR ERV1 1 55 -4899 1955 74 0 30 chr5 107588845 107589150 -92041000 - AluY SINE Alu 0 314 18 5057 110 13 4 chr5 107589150 107589864 -92040286 + MER84-int LTR ERV1 55 779 -4175 * 12147 94 9 14 chr5 107589863 107591652 -92038498 + MER84-int LTR ERV1 894 2672 -2282 981 90 0 2 chr5 107591655 107591909 -92038241 - AluY SINE Alu -8 303 1 3517 110 6 4 chr5 107591916 107592443 -92037707 + MER84-int LTR ERV1 4427 4954 0 815 165 66 11 chr5 107592443 107592770 -92037380 + MER84 LTR ERVI 1 427 -80 386 307 37 103 chr5 107592963 107593341 -92036809 + L2 LINE L2 2819 3171 -101 395 247 117 19 chr5 107593592 107593735 -92036415 + MIR SINE MIR 3 154 -68 2242 121 0 0 chr5 107593735 107594042 -92036108 + AluSx SINE Alu 1 307 -5 449 317 50 12 chr5 107594251 107594412 -92035738 - MIR SINE MIR -76 186 20 2078 134 10 0 chr5 107595604 107595941 -92034209 + AluSx SINE Alu 1 312 0 198 171 0 0 chr5 107596678 107596719 -92033431 + T-rich Low_complexity Low_complexity 1 41 0 741 226 198 28 chr5 107599496 107599735 -92030415 - L2 LINE L2 -252 3061 2864 436 275 8 0 chr5 107599735 107599866 -92030284 + MER94 DNA DNA 3 134 0 741 226 198 28 chr5 107599866 107599979 -92030171 - L2 LINE L2 -449 2864 2655 254 312 37 37 chr5 107600403 107600512 -92029638 - MER5B DNA MER1_type -68 110 2 628 200 7 12 chr5 107600726 107600874 -92029276 + MSTD LTR MaLR 1 134 -265 930 194 29 11 chr5 107601141 107601345 -92028805 + MSTD LTR MaLR 218 396 0 258 258 11 0 chr5 107601365 107601374 -92028776 + (TA)n Simple_repeat Simple_repeat 2 9 -82 1495 186 51 61 chr5 107601374 107601766 -92028384 - MLT1B LTR MaLR 0 390 3 258 258 11 0 chr5 107601766 107601845 -92028305 + (TA)n Simple_repeat Simple_repeat 9 91 0 435 355 42 0 chr5 107602600 107602766 -92027384 - MIR3 SINE MIR -5 203 31 221 305 137 11 chr5 107603287 107603382 -92026768 - MIR SINE MIR -3 259 153 648 291 154 22 chr5 107603526 107603928 -92026222 - MLT1K LTR MaLR 0 588 134 1657 205 0 0 chr5 107604433 107604731 -92025419 + AluJo SINE Alu 1 298 -14 186 323 67 61 chr5 107604766 107604930 -92025220 - L2 LINE L2 -162 3110 2946 227 390 136 6 chr5 107605098 107605421 -92024729 - L2 LINE L2 -581 2733 2369 2431 123 28 14 chr5 107605631 107605990 -92024160 + THE1B LTR MaLR 1 364 0 829 70 0 129 chr5 107606073 107606244 -92023906 - L1PA13 LINE L1 0 6163 6015 404 296 117 38 chr5 107607179 107607496 -92022654 + MLT1L LTR MaLR 166 507 -108 2438 48 0 0 chr5 107608291 107608583 -92021567 + AluY SINE Alu 1 292 -19 742 245 154 0 chr5 107608583 107608791 -92021359 + MIR SINE MIR 22 261 -1 204 303 141 20 chr5 107608988 107609087 -92021063 - L2 LINE L2 -1 3312 3202 1039 100 35 12 chr5 107611650 107611820 -92018330 - MER30 DNA MER1_type -56 174 1 2252 244 37 11 chr5 107612577 107613123 -92017027 + REP3 LTR ERV 3 562 0 22 0 0 0 chr5 107613429 107613451 -92016699 + AT_rich Low_complexity Low_complexity 1 22 0 665 264 31 0 chr5 107615292 107615455 -92014695 + MER20 DNA MER1_type 1 168 -51 1501 195 5 100 chr5 107615713 107616113 -92014037 - MLT1A1 LTR MaLR -2 363 2 297 200 0 0 chr5 107617863 107617918 -92012232 - L2 LINE L2 -3 3269 3215 388 357 0 0 chr5 107618200 107618326 -92011824 - MIR SINE MIR -52 210 85 527 277 100 45 chr5 107618517 107618737 -92011413 - MIR SINE MIR -15 247 16 248 395 151 14 chr5 107618763 107619318 -92010832 - L2 LINE L2 -472 2842 2212 194 304 218 30 chr5 107619344 107619811 -92010339 - L2 LINE L2 -1220 2094 1540 649 206 14 36 chr5 107619961 107620187 -92009963 + L1MC4a LINE L1 5265 5487 -688 318 250 23 11 chr5 107620214 107620302 -92009848 + L1MC4a LINE L1 5562 5650 -2158 22 0 0 0 chr5 107620333 107620355 -92009795 + AT_rich Low_complexity Low_complexity 1 22 0 453 254 184 18 chr5 107620437 107620838 -92009312 + L1MC4a LINE L1 5666 6133 -1675 268 282 0 14 chr5 107621806 107621877 -92008273 + MIR3 SINE MIR 132 201 -7 1260 210 78 52 chr5 107622850 107623236 -92006914 - MSTD LTR MaLR 0 396 1 1424 184 11 21 chr5 107623374 107623656 -92006494 + AluJo SINE Alu 12 290 -22 309 209 22 55 chr5 107623667 107623758 -92006392 + MER104 DNA Tc2 58 145 -35 2698 173 18 8 chr5 107623947 107624445 -92005705 + MLT1D LTR MaLR 3 505 0 228 241 35 26 chr5 107624655 107624771 -92005379 + L1MC4 LINE L1 7923 8039 -3 871 188 0 5 chr5 107625027 107625224 -92004926 + L1MA4 LINE L1 6101 6296 -4 248 350 44 35 chr5 107626363 107626589 -92003561 + L2 LINE L2 1209 1436 -1878 2682 94 3 21 chr5 107627023 107627405 -92002745 - THE1C LTR MaLR 0 375 1 827 299 21 0 chr5 107627882 107628116 -92002034 - MIR SINE MIR -11 251 13 21 57 0 0 chr5 107628383 107628418 -92001732 + AT_rich Low_complexity Low_complexity 1 35 0 2048 133 3 0 chr5 107630091 107630376 -91999774 + AluSx SINE Alu 1 286 -26 207 146 0 0 chr5 107630719 107630760 -91999390 + (TG)n Simple_repeat Simple_repeat 2 42 0 793 203 24 56 chr5 107630960 107631211 -91998939 - Charlie1b DNA MER1_type -191 332 90 241 200 17 0 chr5 107632151 107632211 -91997939 + (TA)n Simple_repeat Simple_repeat 1 61 0 496 310 12 33 chr5 107632216 107632458 -91997692 - L1ME3A LINE L1 -270 5900 5664 579 258 58 81 chr5 107632568 107632828 -91997322 - MIR SINE MIR -3 259 6 248 224 40 13 chr5 107633114 107633190 -91996960 - MLT1K LTR MaLR -7 581 504 513 84 0 0 chr5 107633210 107633281 -91996869 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 1165 224 7 7 chr5 107633281 107633575 -91996575 + L1MD1 LINE L1 2505 2798 -3348 319 198 59 30 chr5 107633571 107633672 -91996478 + L1MD1 LINE L1 4515 4618 -1528 * 4149 180 70 4 chr5 107633732 107634636 -91995514 + L1MD1 LINE L1 5279 6241 -1 2351 78 0 0 chr5 107634645 107634938 -91995212 + AluSg SINE Alu 1 293 -17 266 247 0 0 chr5 107634945 107635018 -91995132 - Charlie1 DNA MER1_type -58 2703 2631 24 0 0 0 chr5 107635067 107635091 -91995059 + AT_rich Low_complexity Low_complexity 1 24 0 4717 214 53 18 chr5 107635098 107636459 -91993691 - Charlie1a DNA MER1_type -43 1412 5 362 278 9 35 chr5 107636463 107636578 -91993572 + L2 LINE L2 3202 3313 0 893 199 0 47 chr5 107636584 107636755 -91993395 + FRAM SINE Alu 1 163 -3 334 288 43 43 chr5 107637412 107637575 -91992575 + MIR SINE MIR 50 212 -50 24 0 0 0 chr5 107637691 107637715 -91992435 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr5 107638770 107638800 -91991350 + AT_rich Low_complexity Low_complexity 1 30 0 222 293 60 35 chr5 107639383 107639499 -91990651 - L3 LINE CR1 -4 1573 1455 3355 139 9 19 chr5 107639935 107640466 -91989684 + MER1A DNA MER1_type 2 527 0 712 239 146 10 chr5 107640658 107640967 -91989183 + L1ME3A LINE L1 5551 5901 -269 247 282 55 55 chr5 107641128 107641238 -91988912 + L1ME3A LINE L1 5955 6064 -106 200 99 69 30 chr5 107641305 107641406 -91988744 + (TA)n Simple_repeat Simple_repeat 2 106 0 1838 256 61 20 chr5 107642082 107642672 -91987478 - MLT1E2 LTR MaLR 0 626 13 341 297 115 18 chr5 107643731 107643896 -91986254 - MIR3 SINE MIR -3 205 25 654 220 17 69 chr5 107645495 107645668 -91984482 - MER5B DNA MER1_type -13 165 2 22 0 0 0 chr5 107647364 107647386 -91982764 + AT_rich Low_complexity Low_complexity 1 22 0 3808 109 231 76 chr5 107647834 107649150 -91981000 + pTR5 LTR ERV1 743 2438 0 207 0 0 0 chr5 107649387 107649410 -91980740 + (CA)n Simple_repeat Simple_repeat 2 24 0 347 250 134 71 chr5 107651019 107651287 -91978863 + L1M2 LINE L1 679 963 -5886 543 176 0 0 chr5 107652626 107652711 -91977439 + AluJb SINE Alu 207 291 -21 2045 120 10 3 chr5 107652984 107653276 -91976874 + AluSg SINE Alu 1 294 -16 1785 164 20 23 chr5 107653699 107653998 -91976152 + AluJb SINE Alu 3 300 -12 333 47 0 0 chr5 107654007 107654050 -91976100 + (T)n Simple_repeat Simple_repeat 1 43 0 411 335 37 16 chr5 107654561 107654752 -91975398 + MIR SINE MIR 65 259 -3 22 56 0 0 chr5 107654806 107654842 -91975308 + AT_rich Low_complexity Low_complexity 1 36 0 467 331 26 7 chr5 107654891 107655045 -91975105 - L2 LINE L2 0 3272 3116 25 31 0 0 chr5 107655045 107655077 -91975073 + AT_rich Low_complexity Low_complexity 1 32 0 207 306 71 20 chr5 107655177 107655275 -91974875 - L2 LINE L2 -200 3072 2970 865 241 59 53 chr5 107655301 107655621 -91974529 - MER102b DNA MER1_type -18 323 2 321 296 69 21 chr5 107655752 107655941 -91974209 - L2 LINE L2 -584 2730 2533 1496 239 61 20 chr5 107655955 107656399 -91973751 + LTR40b LTR ERVL 1 462 0 995 143 10 46 chr5 107656399 107656595 -91973555 - MER3 DNA MER1_type -20 189 1 554 303 103 59 chr5 107659274 107659426 -91970724 - L2 LINE L2 -1 3271 3127 210 71 0 0 chr5 107659426 107659454 -91970696 + (CAA)n Simple_repeat Simple_repeat 3 30 0 554 303 103 59 chr5 107659454 107659978 -91970172 - L2 LINE L2 -145 3127 2550 958 291 30 81 chr5 107660050 107660545 -91969605 - L2 LINE L2 -1 3312 2843 287 291 81 34 chr5 107661183 107661331 -91968819 + MIR SINE MIR 64 218 -44 1802 167 115 12 chr5 107661516 107661935 -91968215 - MLT1C LTR MaLR -2 465 4 3539 122 8 2 chr5 107662047 107662571 -91967579 - MER1A DNA MER1_type 0 527 1 243 61 0 0 chr5 107662864 107662897 -91967253 + (T)n Simple_repeat Simple_repeat 1 33 0 399 268 0 18 chr5 107663804 107663916 -91966234 - MIR SINE MIR -128 134 25 231 304 13 25 chr5 107663926 107664005 -91966145 + MIR SINE MIR 168 245 -17 21 36 0 0 chr5 107664120 107664148 -91966002 + AT_rich Low_complexity Low_complexity 1 28 0 9409 138 26 19 chr5 107664148 107666812 -91963338 - L1MA3 LINE L1 0 6305 3623 729 231 21 66 chr5 107667934 107668176 -91961974 + MIR SINE MIR 32 262 0 257 304 98 0 chr5 107668185 107668287 -91961863 - MIR SINE MIR -44 218 107 1331 189 109 23 chr5 107669274 107669576 -91960574 - MER58B DNA MER1_type -1 340 13 4249 92 27 11 chr5 107669662 107670294 -91959856 - L1PA14 LINE L1 -1 6160 5519 221 283 29 26 chr5 107670312 107670486 -91959664 + MIR SINE MIR 2 220 -42 453 287 77 98 chr5 107670561 107671104 -91959046 - L1M4 LINE L1 -753 5393 4862 6649 72 13 0 chr5 107671267 107672565 -91957585 - L1PA10 LINE L1 -1 6167 4861 554 162 36 0 chr5 107672584 107672695 -91957455 - L1MB2 LINE L1 -7 6164 6050 357 350 55 20 chr5 107673177 107673377 -91956773 + L2 LINE L2 3017 3223 -90 200 204 0 23 chr5 107673380 107673424 -91956726 + MIR SINE MIR 215 257 -5 520 233 8 15 chr5 107675029 107675162 -91954988 - MER20B DNA MER1_type -4 779 648 222 171 0 0 chr5 107675162 107675203 -91954947 + (TA)n Simple_repeat Simple_repeat 2 42 0 954 182 14 23 chr5 107675203 107675417 -91954733 - MER20B DNA MER1_type -131 652 441 2693 73 88 24 chr5 107675451 107675826 -91954324 + MLT2A1 LTR ERVL 1 406 -38 453 81 0 0 chr5 107675826 107675888 -91954262 + (TA)n Simple_repeat Simple_repeat 2 63 0 2693 73 88 24 chr5 107675888 107675922 -91954228 + MLT2A1 LTR ERVL 406 436 -8 1066 219 52 0 chr5 107675925 107676135 -91954015 + Tigger7 DNA MER2_type 43 263 -287 571 204 0 0 chr5 107676139 107676237 -91953913 + Tigger7 DNA MER2_type 2390 2487 0 1109 273 81 24 chr5 107676237 107676655 -91953495 - MER20B DNA MER1_type -341 442 1 1160 155 33 24 chr5 107676665 107676687 -91953463 - MER20B DNA MER1_type -3 216 196 944 61 15 0 chr5 107676687 107676818 -91953332 + (TTTC)n Simple_repeat Simple_repeat 4 136 0 1160 155 33 24 chr5 107676818 107677008 -91953142 - MER20B DNA MER1_type -23 196 2 189 345 167 6 chr5 107677359 107677533 -91952617 - MIR3 SINE MIR -3 205 4 21 0 0 0 chr5 107677551 107677572 -91952578 + AT_rich Low_complexity Low_complexity 1 21 0 566 248 103 39 chr5 107677741 107677975 -91952175 - MIR SINE MIR -2 260 12 210 171 0 0 chr5 107678630 107678671 -91951479 + CT-rich Low_complexity Low_complexity 1 41 0 315 0 0 0 chr5 107678671 107678706 -91951444 + (TG)n Simple_repeat Simple_repeat 2 36 0 347 140 0 0 chr5 107679108 107679158 -91950992 - MER45 DNA AcHobo 0 1581 1532 413 133 86 57 chr5 107679162 107679267 -91950883 + MER53 DNA DNA 4 111 -78 364 246 167 0 chr5 107679282 107679408 -91950742 - Charlie2 DNA MER1_type -861 2001 1855 596 283 185 11 chr5 107679409 107679685 -91950465 - Charlie2 DNA MER1_type -2457 325 2 294 315 75 45 chr5 107679782 107679849 -91950301 + L2 LINE L2 2736 2799 -514 2395 55 10 0 chr5 107679849 107680138 -91950012 - AluY SINE Alu -19 292 1 294 315 75 45 chr5 107680138 107680344 -91949806 + L2 LINE L2 2799 3017 -296 180 293 17 17 chr5 107680484 107680542 -91949608 + L2 LINE L2 3155 3212 -60 235 235 49 39 chr5 107680640 107680742 -91949408 - MIR SINE MIR -10 252 150 210 122 122 20 chr5 107680866 107680915 -91949235 - MER5A DNA MER1_type 0 189 136 453 45 45 0 chr5 107681007 107681073 -91949077 - L1PA8 LINE L1 -2 6170 6102 756 224 22 28 chr5 107681113 107681292 -91948858 + MER5A DNA MER1_type 12 189 0 636 288 83 18 chr5 107682143 107682372 -91947778 + MIR SINE MIR 19 262 0 21 0 0 0 chr5 107682853 107682874 -91947276 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 107684162 107684185 -91945965 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 107684505 107684527 -91945623 + AT_rich Low_complexity Low_complexity 1 22 0 3295 153 7 2 chr5 107685208 107685764 -91944386 + L1MB3 LINE L1 5621 6179 -4 22 0 0 0 chr5 107685955 107685977 -91944173 + AT_rich Low_complexity Low_complexity 1 22 0 269 281 0 0 chr5 107685977 107686034 -91944116 + L2 LINE L2 3209 3265 -7 215 313 31 0 chr5 107686295 107686359 -91943791 - MIR SINE MIR -92 170 105 989 269 94 46 chr5 107686744 107687306 -91942844 - L1ME4a LINE L1 -23 6098 5510 26 50 0 0 chr5 107687379 107687419 -91942731 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 107687584 107687607 -91942543 + AT_rich Low_complexity Low_complexity 1 23 0 1611 158 20 24 chr5 107689189 107689481 -91940669 + AluJb SINE Alu 1 291 -21 21 0 0 0 chr5 107689957 107689978 -91940172 + AT_rich Low_complexity Low_complexity 1 21 0 1975 143 3 3 chr5 107690850 107691158 -91938992 + AluJb SINE Alu 1 308 -4 665 290 23 6 chr5 107692689 107692865 -91937285 + MIR SINE MIR 69 247 -15 29 0 0 0 chr5 107693269 107693298 -91936852 + AT_rich Low_complexity Low_complexity 1 29 0 233 401 52 6 chr5 107695371 107695543 -91934607 + MIR SINE MIR 4 183 -79 304 202 34 11 chr5 107695661 107695750 -91934400 - MER117 DNA MER1_type -106 91 1 321 324 36 0 chr5 107695916 107696027 -91934123 + L2 LINE L2 2226 2340 -974 659 302 73 53 chr5 107696040 107696398 -91933752 + L2 LINE L2 2864 3228 -85 539 263 26 13 chr5 107696411 107696567 -91933583 - MIR SINE MIR -81 181 24 22 35 0 0 chr5 107696927 107696956 -91933194 + AT_rich Low_complexity Low_complexity 1 29 0 2773 7 0 16 chr5 107697715 107698025 -91932125 - AluY SINE Alu -6 305 1 21 0 0 0 chr5 107698540 107698561 -91931589 + AT_rich Low_complexity Low_complexity 1 21 0 370 237 163 0 chr5 107698721 107698856 -91931294 - MIR SINE MIR -1 261 105 1205 167 5 28 chr5 107698858 107699073 -91931077 + AluJo SINE Alu 81 290 -22 831 48 0 0 chr5 107699073 107699177 -91930973 + (GGAA)n Simple_repeat Simple_repeat 3 106 0 21 71 0 0 chr5 107699673 107699715 -91930435 + AT_rich Low_complexity Low_complexity 1 42 0 2251 117 3 0 chr5 107701000 107701309 -91928841 - AluSg SINE Alu 0 310 1 206 309 0 12 chr5 107702465 107702549 -91927601 + (TA)n Simple_repeat Simple_repeat 1 83 0 686 136 45 38 chr5 107705177 107705309 -91924841 + FLAM_C SINE Alu 1 133 0 2339 77 10 0 chr5 107706490 107706788 -91923362 + AluSp SINE Alu 1 301 -12 2159 171 44 38 chr5 107707094 107707592 -91922558 - MLT1D LTR MaLR -2 503 3 222 37 0 0 chr5 107710538 107710565 -91919585 + (TC)n Simple_repeat Simple_repeat 2 28 0 301 229 12 36 chr5 107710567 107710650 -91919500 + L1MC4 LINE L1 6624 6704 -1338 192 326 0 0 chr5 107711118 107711167 -91918983 - L2 LINE L2 -18 3295 3247 184 114 86 0 chr5 107712364 107712399 -91917751 - L2 LINE L2 -94 3219 3182 1450 271 152 25 chr5 107712445 107713038 -91917112 + L2 LINE L2 1745 2412 -902 414 285 144 4 chr5 107713039 107713309 -91916841 - L1ME4a LINE L1 -104 6017 5710 720 273 58 97 chr5 107713328 107713342 -91916808 + L2 LINE L2 2573 2586 -727 1233 211 19 22 chr5 107713342 107713665 -91916485 + MER33 DNA MER1_type 2 323 -1 720 273 58 97 chr5 107713665 107714286 -91915864 + L2 LINE L2 2586 3239 -74 195 333 210 28 chr5 107714610 107714901 -91915249 + L2 LINE L2 2929 3272 0 254 225 12 12 chr5 107715421 107715501 -91914649 + (TA)n Simple_repeat Simple_repeat 2 81 0 22 70 0 0 chr5 107716093 107716136 -91914014 + AT_rich Low_complexity Low_complexity 1 43 0 701 218 198 25 chr5 107717622 107717824 -91912326 - MIR SINE MIR -2 260 24 4530 166 33 20 chr5 107717835 107718701 -91911449 - MER6 DNA MER2_type -26 839 -35 25 0 0 0 chr5 107720874 107720899 -91909251 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 107721221 107721242 -91908908 + AT_rich Low_complexity Low_complexity 1 21 0 271 361 28 7 chr5 107721548 107721692 -91908458 + MIR SINE MIR 20 166 -96 1084 201 19 5 chr5 107721694 107721903 -91908247 + AluJo SINE Alu 89 300 -12 289 327 77 0 chr5 107721980 107722084 -91908066 + MIR SINE MIR 47 158 -104 28 29 0 0 chr5 107722188 107722223 -91907927 + AT_rich Low_complexity Low_complexity 1 35 0 1018 142 114 24 chr5 107723211 107723422 -91906728 + MER46A DNA MER2_type 5 234 -2 2181 4 0 0 chr5 107723705 107723942 -91906208 - AluYb8 SINE Alu 0 318 82 1625 181 0 30 chr5 107724094 107724398 -91905752 + AluSx SINE Alu 1 295 -17 467 247 129 12 chr5 107724555 107724725 -91905425 + MIR SINE MIR 67 256 -6 650 164 18 0 chr5 107724956 107725066 -91905084 - FLAM_A SINE Alu -8 134 23 213 264 126 0 chr5 107725067 107725154 -91904996 + MIR SINE MIR 164 261 -1 2454 68 0 10 chr5 107725401 107725711 -91904439 - AluY SINE Alu -4 307 1 279 0 0 0 chr5 107726922 107726953 -91903197 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 339 316 0 21 chr5 107727138 107727233 -91902917 - MIR3 SINE MIR -114 94 2 198 0 0 0 chr5 107727911 107727933 -91902217 + (TC)n Simple_repeat Simple_repeat 1 22 0 1599 144 111 3 chr5 107728415 107728721 -91901429 - MER44D DNA MER2_type 0 609 1 23 33 0 0 chr5 107728729 107728759 -91901391 + AT_rich Low_complexity Low_complexity 1 30 0 380 306 69 73 chr5 107728868 107729129 -91901021 + MIR SINE MIR 2 261 -1 1106 249 83 34 chr5 107730380 107730883 -91899267 - L2 LINE L2 -4 3309 2787 268 310 11 11 chr5 107730883 107730970 -91899180 - L2 LINE L2 -634 2680 2594 771 201 0 0 chr5 107732432 107732571 -91897579 - FLAM_C SINE Alu -2 141 3 376 235 162 37 chr5 107732733 107732869 -91897281 - L2 LINE L2 -2 3311 3159 351 0 0 0 chr5 107732902 107732941 -91897209 + (GA)n Simple_repeat Simple_repeat 1 39 0 24 0 0 0 chr5 107734602 107734626 -91895524 + AT_rich Low_complexity Low_complexity 1 24 0 388 259 75 34 chr5 107735051 107735198 -91894952 - L1ME3A LINE L1 -3 6167 6015 1246 118 0 0 chr5 107735430 107735600 -91894550 + AluSg/x SINE Alu 134 303 -9 968 310 43 2 chr5 107735697 107736091 -91894059 + L1M4 LINE L1 3753 4162 -1984 628 307 63 21 chr5 107736572 107736991 -91893159 - MLT1J LTR MaLR 0 511 19 351 0 0 0 chr5 107737448 107737487 -91892663 + (CA)n Simple_repeat Simple_repeat 2 40 0 303 322 153 42 chr5 107737709 107738135 -91892015 + L1M4 LINE L1 4560 5032 -1114 198 0 0 0 chr5 107738247 107738269 -91891881 + (TA)n Simple_repeat Simple_repeat 2 23 0 2249 122 48 20 chr5 107738312 107738666 -91891484 + THE1B LTR MaLR 1 364 0 3248 187 83 4 chr5 107739376 107740317 -91889833 + L1MD2 LINE L1 4950 5969 -390 747 159 16 0 chr5 107740314 107740440 -91889710 + L1MD2 LINE L1 6209 6336 -23 * 1732 135 4 11 chr5 107740440 107740707 -91889443 + AluJo SINE Alu 18 282 -30 31 26 0 0 chr5 107740709 107740747 -91889403 + AT_rich Low_complexity Low_complexity 1 38 0 333 247 39 0 chr5 107740782 107740859 -91889291 - MIR SINE MIR -136 126 47 426 229 257 0 chr5 107741046 107741190 -91888960 - MER5A DNA MER1_type 0 189 9 267 349 133 9 chr5 107742390 107742608 -91887542 + L2 LINE L2 2829 3073 -199 1768 104 0 0 chr5 107743254 107743484 -91886666 + AluSq SINE Alu 58 287 -26 225 250 19 0 chr5 107744168 107744220 -91885930 + CT-rich Low_complexity Low_complexity 2 54 0 270 319 35 26 chr5 107744576 107744689 -91885461 + HAL1 LINE L1 798 911 -1596 1244 261 67 35 chr5 107744717 107745266 -91884884 + HAL1 LINE L1 1082 1648 -859 1032 234 124 33 chr5 107745292 107745315 -91884835 + HAL1 LINE L1 2047 2067 -440 2412 68 6 6 chr5 107745315 107745626 -91884524 + AluY SINE Alu 1 311 0 1032 234 124 33 chr5 107745626 107746021 -91884129 + HAL1 LINE L1 2067 2503 -4 207 315 55 0 chr5 107746151 107746224 -91883926 - L2 LINE L2 -3 3269 3193 604 213 73 13 chr5 107746569 107746719 -91883431 - MLT1I LTR MaLR -154 255 97 25 65 0 0 chr5 107748354 107748400 -91881750 + AT_rich Low_complexity Low_complexity 1 46 0 27 0 0 0 chr5 107748707 107748734 -91881416 + AT_rich Low_complexity Low_complexity 1 27 0 736 284 41 5 chr5 107750076 107750294 -91879856 + MIR SINE MIR 37 262 0 180 0 0 0 chr5 107752738 107752758 -91877392 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 632 246 50 6 chr5 107753267 107753446 -91876704 - Charlie8 DNA MER1_type -2132 285 99 893 246 78 4 chr5 107753639 107753871 -91876279 + MIR SINE MIR 14 262 0 597 249 166 28 chr5 107753972 107754189 -91875961 + MIR SINE MIR 16 262 0 1302 160 33 0 chr5 107754338 107754550 -91875600 + MER20 DNA MER1_type 1 219 0 24 0 0 0 chr5 107754683 107754707 -91875443 + AT_rich Low_complexity Low_complexity 1 24 0 6167 137 68 25 chr5 107754878 107755376 -91874774 + Tigger3b DNA MER2_type 1 476 -2552 324 0 0 0 chr5 107755376 107755412 -91874738 + (TG)n Simple_repeat Simple_repeat 2 37 0 6167 137 68 25 chr5 107755412 107756093 -91874057 + Tigger3b DNA MER2_type 476 1230 -1 248 196 0 0 chr5 107756425 107756471 -91873679 + L1MC4 LINE L1 6894 6939 -1103 1706 152 0 18 chr5 107756471 107756747 -91873403 + AluJb SINE Alu 31 301 -11 2319 217 44 26 chr5 107756753 107756899 -91873251 + L1MC4 LINE L1 7285 7427 -615 1976 210 135 6 chr5 107756899 107757379 -91872771 + MLT1F LTR MaLR 1 542 0 2319 217 44 26 chr5 107757379 107757884 -91872266 + L1MC4 LINE L1 7427 8037 -5 1994 159 0 0 chr5 107757928 107758230 -91871920 + AluJb SINE Alu 1 302 -10 344 251 55 47 chr5 107758267 107758502 -91871648 - L1MC/D LINE L1 -387 5734 5610 343 272 158 0 chr5 107758592 107758706 -91871444 + L2 LINE L2 3171 3302 -11 860 243 96 0 chr5 107758722 107758940 -91871210 - MIR SINE MIR -20 242 4 23 33 0 0 chr5 107759030 107759060 -91871090 + AT_rich Low_complexity Low_complexity 1 30 0 32 67 0 0 chr5 107759720 107759780 -91870370 + AT_rich Low_complexity Low_complexity 1 60 0 21 0 0 0 chr5 107759796 107759817 -91870333 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 107760174 107760195 -91869955 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 107760204 107760226 -91869924 + (TA)n Simple_repeat Simple_repeat 2 23 0 22 70 0 0 chr5 107763003 107763046 -91867104 + AT_rich Low_complexity Low_complexity 1 43 0 271 383 80 6 chr5 107765131 107765306 -91864844 + MLT1K LTR MaLR 81 268 -320 249 188 75 50 chr5 107766395 107766475 -91863675 - MIR3 SINE MIR -14 194 113 292 250 143 50 chr5 107767198 107767338 -91862812 + MIR SINE MIR 99 251 -11 335 60 60 0 chr5 107767728 107767795 -91862355 + (TA)n Simple_repeat Simple_repeat 1 71 0 1240 118 5 0 chr5 107768941 107769128 -91861022 + L1PA15 LINE L1 5977 6164 -1 287 353 43 0 chr5 107769637 107769776 -91860374 + MER117 DNA MER1_type 2 146 -51 189 269 0 19 chr5 107770098 107770150 -91860000 - MIR SINE MIR -102 160 110 22 70 0 0 chr5 107770612 107770655 -91859495 + AT_rich Low_complexity Low_complexity 1 43 0 492 333 38 24 chr5 107770812 107771069 -91859081 - MIR SINE MIR -10 252 2 1724 173 3 3 chr5 107771220 107771533 -91858617 - AluJo SINE Alu 0 313 1 650 243 129 25 chr5 107771697 107771899 -91858251 - MER58A DNA MER1_type -1 223 1 1007 319 16 24 chr5 107772114 107772566 -91857584 + L2 LINE L2 2398 2845 -469 2356 197 25 11 chr5 107772587 107773082 -91857068 - MER67A LTR ERV1 0 661 1 648 243 61 0 chr5 107773104 107773252 -91856898 + MIR SINE MIR 54 210 -52 1761 148 17 10 chr5 107773787 107774085 -91856065 + AluJo SINE Alu 1 300 -12 4745 109 107 14 chr5 107774253 107774958 -91855192 + Tigger3b DNA MER2_type 1 640 -2389 2406 67 0 13 chr5 107774958 107775270 -91854880 - AluY SINE Alu -3 308 1 4745 109 107 14 chr5 107775270 107775421 -91854729 + Tigger3b DNA MER2_type 640 776 -2253 2136 119 132 26 chr5 107775421 107775808 -91854342 + MSTA LTR MaLR 1 428 0 4745 109 107 14 chr5 107775808 107776037 -91854113 + Tigger3b DNA MER2_type 776 1231 -1 1714 192 0 0 chr5 107776037 107776334 -91853816 + AluJo SINE Alu 1 297 -15 331 320 95 61 chr5 107776411 107776886 -91853264 + L1ME LINE L1 2676 3166 -2980 22 0 0 0 chr5 107777136 107777158 -91852992 + AT_rich Low_complexity Low_complexity 1 22 0 258 32 0 0 chr5 107777158 107777189 -91852961 + (CA)n Simple_repeat Simple_repeat 2 32 0 387 267 61 38 chr5 107777313 107777576 -91852574 + L1ME LINE L1 5351 5618 -503 6842 153 25 6 chr5 107777724 107778085 -91852065 - L1PB1 LINE L1 0 6151 5798 531 0 0 0 chr5 107778085 107778144 -91852006 + (TA)n Simple_repeat Simple_repeat 1 59 0 6842 153 25 6 chr5 107778144 107780027 -91850123 - L1PB1 LINE L1 -353 5798 3870 233 323 0 43 chr5 107782840 107782933 -91847217 + L2 LINE L2 3182 3270 -2 347 234 26 0 chr5 107783025 107783102 -91847048 + L2 LINE L2 3182 3260 -12 1621 198 68 24 chr5 107783125 107783539 -91846611 + MSTB1 LTR MaLR 1 432 0 465 350 41 0 chr5 107783745 107783942 -91846208 + L2 LINE L2 2850 3054 -218 21 36 0 0 chr5 107784870 107784898 -91845252 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 107785011 107785039 -91845111 + AT_rich Low_complexity Low_complexity 1 28 0 1581 271 55 2 chr5 107785132 107785604 -91844546 + LTR33 LTR ERVL 1 497 -24 799 206 59 52 chr5 107786062 107786334 -91843816 - L1MC5 LINE L1 -476 7485 7212 368 256 77 32 chr5 107786393 107786549 -91843601 - L1MC5 LINE L1 -733 7228 7066 1571 255 29 38 chr5 107788018 107788497 -91841653 + MLT1L LTR MaLR 139 613 -2 928 316 129 15 chr5 107790400 107791005 -91839145 + L2 LINE L2 1973 2646 -668 376 284 84 21 chr5 107791306 107791496 -91838654 + L2 LINE L2 3112 3313 0 201 341 98 8 chr5 107792320 107792443 -91837707 + L3 LINE CR1 933 1066 -511 221 284 211 0 chr5 107792504 107792599 -91837551 - L2 LINE L2 -8 3305 3191 502 211 0 16 chr5 107793426 107793554 -91836596 - L1MA9 LINE L1 -38 6274 6149 239 319 49 42 chr5 107794877 107795021 -91835129 + MIR SINE MIR 47 191 -71 228 143 0 0 chr5 107795074 107795116 -91835034 + (TCCCC)n Simple_repeat Simple_repeat 2 43 0 706 257 139 58 chr5 107795712 107796295 -91833855 - MER67B LTR ERV1 0 661 32 201 213 0 0 chr5 107797866 107797913 -91832237 + GA-rich Low_complexity Low_complexity 3 49 0 240 233 23 9 chr5 107799658 107799754 -91830396 - MIR SINE MIR -19 189 90 216 250 0 0 chr5 107801717 107801761 -91828389 + (TG)n Simple_repeat Simple_repeat 2 45 0 591 265 174 9 chr5 107802529 107802748 -91827402 + MIR SINE MIR 1 255 -7 6205 23 0 0 chr5 107803285 107804511 -91825639 - L1PA2 LINE L1 -283 5872 4647 2053 44 0 0 chr5 107804511 107804762 -91825388 + L1PA2 LINE L1 5905 6155 0 21 0 0 0 chr5 107804762 107804783 -91825367 + AT_rich Low_complexity Low_complexity 1 21 0 202 290 43 29 chr5 107805684 107805753 -91824397 + MER5B DNA MER1_type 109 178 0 22 35 0 0 chr5 107807222 107807251 -91822899 + AT_rich Low_complexity Low_complexity 1 29 0 219 346 96 38 chr5 107807873 107808113 -91822037 + L2 LINE L2 2084 2337 -977 183 316 0 51 chr5 107808609 107808688 -91821462 + L2 LINE L2 3180 3254 -59 24 0 0 0 chr5 107809252 107809276 -91820874 + AT_rich Low_complexity Low_complexity 1 24 0 883 197 69 0 chr5 107810282 107810470 -91819680 + L1PA16 LINE L1 5950 6150 -16 418 344 68 21 chr5 107810613 107810850 -91819300 - MIR SINE MIR -14 248 3 227 381 57 0 chr5 107810939 107811044 -91819106 - L2 LINE L2 -7 3265 3155 329 308 45 45 chr5 107812119 107812252 -91817898 + MIR3 SINE MIR 73 205 -3 345 108 39 20 chr5 107812660 107812762 -91817388 + (TA)n Simple_repeat Simple_repeat 1 104 0 2065 131 7 3 chr5 107812762 107813067 -91817083 - AluSx SINE Alu -6 306 1 21 71 0 0 chr5 107813856 107813898 -91816252 + AT_rich Low_complexity Low_complexity 1 42 0 25 51 0 0 chr5 107814497 107814536 -91815614 + AT_rich Low_complexity Low_complexity 1 39 0 563 328 8 29 chr5 107816152 107816390 -91813760 + MIR SINE MIR 1 233 -29 436 298 18 0 chr5 107816410 107816524 -91813626 - L2 LINE L2 0 3313 3198 237 178 119 6 chr5 107818023 107818108 -91812042 + MIR SINE MIR 20 121 -87 34 42 0 0 chr5 107818200 107818248 -91811902 + AT_rich Low_complexity Low_complexity 1 48 0 245 363 40 66 chr5 107818537 107818810 -91811340 - L2 LINE L2 -359 2955 2690 261 169 19 136 chr5 107869659 107869813 -91760337 - LTR49-int LTR ERV1 -1913 4685 4550 375 219 8 73 chr5 107870187 107870310 -91759840 - LTR49-int LTR ERV1 -3674 3084 2970 * 497 210 14 53 chr5 107870283 107870546 -91759604 - LTR49-int LTR ERV1 -2021 3592 1554 28 0 0 0 chr5 107870708 107870736 -91759414 + AT_rich Low_complexity Low_complexity 1 28 0 20220 32 1 1 chr5 107870736 107873961 -91756189 - L1PA4 LINE L1 -11 6144 2921 214 242 30 0 chr5 107875366 107875432 -91754718 + (TA)n Simple_repeat Simple_repeat 1 68 0 1457 46 92 32 chr5 107875764 107875981 -91754169 - MER30 DNA MER1_type 0 230 1 183 42 0 0 chr5 107876068 107876092 -91754058 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 181 216 198 81 chr5 107876143 107876254 -91753896 - L2 LINE L2 -11 3302 3179 205 346 43 49 chr5 107876437 107876622 -91753528 - L2 LINE L2 -337 2977 2794 354 272 220 16 chr5 107876923 107877114 -91753036 + MIR SINE MIR 32 261 -1 282 29 0 0 chr5 107877801 107877836 -91752314 + (TC)n Simple_repeat Simple_repeat 1 35 0 2008 118 38 0 chr5 107878209 107878498 -91751652 + AluSx SINE Alu 3 302 -10 395 185 11 0 chr5 107878500 107878592 -91751558 + (TA)n Simple_repeat Simple_repeat 1 93 0 363 127 0 0 chr5 107878592 107878647 -91751503 + Alu SINE Alu 243 297 -4 26 0 0 0 chr5 107878647 107878673 -91751477 + AT_rich Low_complexity Low_complexity 1 26 0 253 291 0 25 chr5 107878691 107878770 -91751380 + MIR SINE MIR 180 256 -6 884 252 93 3 chr5 107880599 107880889 -91749261 - MER46C DNA MER2_type -1 337 22 474 293 131 48 chr5 107881227 107881685 -91748465 - L1MC4a LINE L1 -1837 5971 5476 287 336 24 16 chr5 107881799 107881924 -91748226 + MER5A DNA MER1_type 1 126 -63 2465 187 107 72 chr5 107881927 107882784 -91747366 - MER63C DNA MER1_type -8 922 1 216 288 0 15 chr5 107882784 107882850 -91747300 + MER5A DNA MER1_type 120 184 -5 303 320 0 6 chr5 107883642 107883747 -91746403 - MIR3 SINE MIR -41 167 64 25 31 0 0 chr5 107885889 107885921 -91744229 + AT_rich Low_complexity Low_complexity 1 32 0 435 38 0 0 chr5 107886215 107886268 -91743882 + (CA)n Simple_repeat Simple_repeat 2 54 0 229 90 45 45 chr5 107886532 107886621 -91743529 + (TA)n Simple_repeat Simple_repeat 2 90 0 353 182 81 0 chr5 107886926 107887025 -91743125 + L1ME3A LINE L1 6059 6165 -5 243 0 0 0 chr5 107887937 107887964 -91742186 + (A)n Simple_repeat Simple_repeat 1 27 0 1796 148 46 3 chr5 107888691 107888975 -91741175 - AluJb SINE Alu -16 296 1 362 277 6 107 chr5 107889724 107889883 -91740267 + MIR3 SINE MIR 61 203 -5 209 308 0 13 chr5 107891178 107891256 -91738894 - MIR SINE MIR 0 262 186 228 193 18 53 chr5 107891491 107891605 -91738545 + (TA)n Simple_repeat Simple_repeat 2 111 0 1471 215 91 59 chr5 107893061 107893516 -91736634 - MLT1F1 LTR MaLR 0 567 128 1914 85 15 11 chr5 107893516 107893787 -91736363 + L1PB1 LINE L1 5880 6151 0 1471 215 91 59 chr5 107893787 107893894 -91736256 - MLT1F1 LTR MaLR -439 128 25 1782 206 45 13 chr5 107893894 107894292 -91735858 - MLT2D LTR ERVL -3 411 1 1471 215 91 59 chr5 107894292 107894318 -91735832 - MLT1F1 LTR MaLR -542 25 1 24 53 0 0 chr5 107894617 107894655 -91735495 + AT_rich Low_complexity Low_complexity 1 38 0 264 77 0 0 chr5 107896728 107896767 -91733383 + (TG)n Simple_repeat Simple_repeat 2 40 0 672 175 49 0 chr5 107896839 107896982 -91733168 + L1 LINE L1 3852 4001 -2145 21 0 0 0 chr5 107897638 107897659 -91732491 + AT_rich Low_complexity Low_complexity 1 21 0 187 321 92 55 chr5 107898180 107898398 -91731752 + L3b LINE CR1 1116 1341 -242 2427 161 30 39 chr5 107899608 107900058 -91730092 + L1MA7 LINE L1 5724 6170 -121 1889 122 3 77 chr5 107900058 107900385 -91729765 + AluSq SINE Alu 1 303 -10 2427 161 30 39 chr5 107900385 107900492 -91729658 + L1MA7 LINE L1 6170 6276 -15 1550 103 16 8 chr5 107900492 107900727 -91729423 - L1PB2 LINE L1 -1 6150 5906 28 48 0 0 chr5 107900847 107900889 -91729261 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 107901119 107901140 -91729010 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 107901596 107901619 -91728531 + AT_rich Low_complexity Low_complexity 1 23 0 204 235 0 20 chr5 107901633 107901684 -91728466 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 180 217 22 0 chr5 107901816 107901862 -91728288 - L2 LINE L2 -1 3312 3266 286 325 24 0 chr5 107902548 107902674 -91727476 + (TATATG)n Simple_repeat Simple_repeat 3 131 0 217 173 58 0 chr5 107903373 107903425 -91726725 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 2220 107 3 7 chr5 107903842 107904150 -91726000 - AluSg SINE Alu -2 308 2 23 33 0 0 chr5 107905750 107905780 -91724370 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 107907795 107907816 -91722334 + AT_rich Low_complexity Low_complexity 1 21 0 215 164 29 39 chr5 107910119 107910223 -91719927 + (TA)n Simple_repeat Simple_repeat 2 104 0 21 36 0 0 chr5 107910915 107910943 -91719207 + AT_rich Low_complexity Low_complexity 1 28 0 294 281 50 19 chr5 107911035 107911195 -91718955 - L1ME4a LINE L1 -157 5964 5800 324 0 0 0 chr5 107911489 107911525 -91718625 + (CA)n Simple_repeat Simple_repeat 2 37 0 2205 98 0 23 chr5 107914043 107914349 -91715801 - AluSx SINE Alu -13 299 1 422 281 185 6 chr5 107914673 107914851 -91715299 + MIR SINE MIR 53 262 0 386 284 78 0 chr5 107914912 107915028 -91715122 - MER94 DNA DNA -9 125 1 3922 56 4 0 chr5 107915068 107915570 -91714580 + L1PA7 LINE L1 5644 6147 -7 438 288 99 41 chr5 107916021 107916264 -91713886 - L2 LINE L2 -943 2371 2115 709 228 28 38 chr5 107916534 107916745 -91713405 - MER3 DNA MER1_type 0 209 1 2125 121 7 0 chr5 107917123 107917429 -91712721 - AluSx SINE Alu -2 310 3 21 0 0 0 chr5 107917492 107917513 -91712637 + AT_rich Low_complexity Low_complexity 1 21 0 186 301 82 71 chr5 107917568 107917751 -91712399 - MIR SINE MIR -1 261 77 256 267 178 20 chr5 107917836 107917937 -91712213 - L2 LINE L2 -253 3060 2944 481 185 0 0 chr5 107918533 107918614 -91711536 + AluSg/x SINE Alu 201 281 -28 1801 176 0 0 chr5 107918663 107918953 -91711197 - AluJo SINE Alu -22 290 1 339 318 7 27 chr5 107921905 107922053 -91708097 + MER5A DNA MER1_type 4 148 -41 402 115 0 0 chr5 107924015 107924076 -91706074 + (CA)n Simple_repeat Simple_repeat 2 62 0 709 287 49 20 chr5 107924144 107924388 -91705762 + MIR SINE MIR 2 252 -10 385 264 104 8 chr5 107925281 107925406 -91704744 - MIR SINE MIR -124 138 2 384 59 0 0 chr5 107925409 107925460 -91704690 + (CA)n Simple_repeat Simple_repeat 1 51 0 24 53 0 0 chr5 107927220 107927258 -91702892 + AT_rich Low_complexity Low_complexity 1 38 0 10993 209 51 22 chr5 107928369 107929510 -91700640 + L1MA4A LINE L1 815 1921 -4927 1779 141 17 20 chr5 107929510 107929808 -91700342 + AluSx SINE Alu 1 297 -15 10993 209 51 22 chr5 107929808 107933004 -91697146 + L1MA4A LINE L1 1921 5283 -1565 2383 97 36 30 chr5 107933004 107933366 -91696784 + THE1B LTR MaLR 1 364 0 10993 209 51 22 chr5 107933366 107933413 -91696737 + L1MA4A LINE L1 5283 5327 -1521 3424 144 62 2 chr5 107933413 107934017 -91696133 + L1MA4A LINE L1 6346 6998 -7 228 347 27 0 chr5 107934853 107934928 -91695222 + L2 LINE L2 3187 3263 -9 697 143 50 6 chr5 107934947 107935108 -91695042 + GA-rich Low_complexity Low_complexity 4 171 0 1606 183 10 21 chr5 107935579 107935868 -91694282 + AluJb SINE Alu 1 286 -26 383 0 0 21 chr5 107936147 107936195 -91693955 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 452 285 104 0 chr5 107937446 107937590 -91692560 - MIR SINE MIR -102 160 2 280 346 25 50 chr5 107940315 107940474 -91689676 - MLT1K LTR MaLR -344 244 90 1225 321 167 15 chr5 107940568 107941354 -91688796 - L3 LINE CR1 -37 1540 636 195 322 51 42 chr5 107941362 107941480 -91688670 - L3 LINE CR1 -1213 364 246 270 375 44 0 chr5 107941918 107942054 -91688096 + MIR SINE MIR 32 173 -89 26 0 0 0 chr5 107942421 107942447 -91687703 + AT_rich Low_complexity Low_complexity 1 26 0 1396 174 32 12 chr5 107943724 107943977 -91686173 + AluJb SINE Alu 36 293 -19 21 57 0 0 chr5 107945047 107945082 -91685068 + AT_rich Low_complexity Low_complexity 1 35 0 484 148 144 0 chr5 107945082 107945207 -91684943 + L1MD1 LINE L1 6102 6359 0 1948 101 37 13 chr5 107945329 107945627 -91684523 - THE1C LTR MaLR 0 375 71 8594 125 14 35 chr5 107945627 107946998 -91683152 - THE1C-int LTR MaLR -236 1344 3 2418 90 17 39 chr5 107947000 107947357 -91682793 - THE1C LTR MaLR 0 375 27 24 0 0 0 chr5 107947407 107947431 -91682719 + AT_rich Low_complexity Low_complexity 1 24 0 280 0 0 0 chr5 107947459 107947490 -91682660 - THE1C LTR MaLR -344 31 1 303 71 0 0 chr5 107948457 107948499 -91681651 + (CA)n Simple_repeat Simple_repeat 2 43 0 226 250 375 0 chr5 107949171 107949299 -91680851 - MER5A DNA MER1_type 0 189 14 294 208 0 0 chr5 107949752 107949805 -91680345 - MER5B DNA MER1_type -2 176 124 393 147 13 0 chr5 107949810 107949885 -91680265 - L1M LINE L1 -904 5387 5312 1032 120 11 0 chr5 107949885 107950042 -91680108 + L1MA7 LINE L1 6105 6281 -10 215 279 128 23 chr5 107950045 107950131 -91680019 - MER5B DNA MER1_type -73 105 11 23 33 0 0 chr5 107951377 107951407 -91678743 + AT_rich Low_complexity Low_complexity 1 30 0 1570 186 33 35 chr5 107951818 107952184 -91677966 - MLT1A1 LTR MaLR 0 365 1 1609 180 3 11 chr5 107952359 107952686 -91677464 - AluJb SINE Alu 0 327 3 492 302 87 0 chr5 107952991 107953117 -91677033 + MIR3 SINE MIR 53 189 -19 450 53 0 0 chr5 107953617 107953674 -91676476 + (CA)n Simple_repeat Simple_repeat 1 57 0 21 57 0 0 chr5 107954692 107954727 -91675423 + AT_rich Low_complexity Low_complexity 1 35 0 879 146 38 0 chr5 107954763 107954921 -91675229 - L1MA7 LINE L1 -9 6282 6119 21 36 0 0 chr5 107955285 107955313 -91674837 + AT_rich Low_complexity Low_complexity 1 28 0 31 26 0 0 chr5 107956470 107956508 -91673642 + AT_rich Low_complexity Low_complexity 1 38 0 28 0 0 0 chr5 107957210 107957238 -91672912 + AT_rich Low_complexity Low_complexity 1 28 0 1640 72 7 65 chr5 107957238 107957516 -91672634 - L1MA2 LINE L1 0 6304 6043 426 53 0 0 chr5 107957798 107957855 -91672295 + (CA)n Simple_repeat Simple_repeat 1 57 0 6553 125 17 11 chr5 107957868 107959026 -91671124 - L1MA2 LINE L1 -295 6009 4832 2428 70 0 7 chr5 107959026 107959326 -91670824 + AluY SINE Alu 1 298 -13 6553 125 17 11 chr5 107959326 107960069 -91670081 - L1MA2 LINE L1 -1472 4832 4095 312 354 0 0 chr5 107960137 107960216 -91669934 - L2 LINE L2 -5 3267 3189 215 296 102 23 chr5 107961535 107961623 -91668527 - MIR SINE MIR -152 110 16 189 0 0 0 chr5 107963606 107963627 -91666523 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 1680 122 174 10 chr5 107965251 107965539 -91664611 - MER1B DNA MER1_type -2 335 1 210 235 12 86 chr5 107965553 107965634 -91664516 - MER5A DNA MER1_type -1 188 114 * 237 311 123 9 chr5 107965598 107965704 -91664446 + MER5A DNA MER1_type 50 167 -22 196 258 65 32 chr5 107966764 107966826 -91663324 - L2 LINE L2 -3 3269 3206 24 0 0 0 chr5 107967300 107967324 -91662826 + AT_rich Low_complexity Low_complexity 1 24 0 522 265 130 11 chr5 107967532 107967717 -91662433 - MIR SINE MIR -54 208 2 306 165 243 48 chr5 107970184 107970287 -91659863 + MIR SINE MIR 129 251 -11 642 266 37 27 chr5 107971090 107971278 -91658872 - MIR SINE MIR -72 190 1 561 252 79 14 chr5 107972171 107972359 -91657791 + MIR SINE MIR 67 261 -1 290 314 67 0 chr5 107973046 107973151 -91656999 + L2 LINE L2 3202 3313 0 293 209 0 0 chr5 107973434 107973501 -91656649 + MER116 DNA Mariner 3 69 -11 281 296 148 9 chr5 107973593 107973701 -91656449 - L2 LINE L2 -1 3312 3190 24 0 0 0 chr5 107974197 107974221 -91655929 + AT_rich Low_complexity Low_complexity 1 24 0 559 292 89 25 chr5 107974235 107974437 -91655713 - MIR SINE MIR 0 262 48 24 0 0 0 chr5 107975190 107975214 -91654936 + AT_rich Low_complexity Low_complexity 1 24 0 325 194 16 0 chr5 107976525 107976587 -91653563 + AluJ/FLAM SINE Alu 1 63 -239 706 172 9 0 chr5 107976588 107976704 -91653446 + AluJo/FRAM SINE Alu 176 292 -20 452 292 45 51 chr5 107977149 107977327 -91652823 - MER5B DNA MER1_type -1 177 1 468 292 34 28 chr5 107977869 107978047 -91652103 - MER5A DNA MER1_type -7 182 4 311 295 166 0 chr5 107980067 107980206 -91649944 - MLT1K LTR MaLR -76 512 351 6470 165 122 58 chr5 107980217 107981739 -91648411 - MER52A LTR ERV1 -136 1619 1 363 286 90 11 chr5 107981745 107981858 -91648292 - MLT1K LTR MaLR -236 352 219 2416 174 26 7 chr5 107981858 107982282 -91647868 - MSTB1 LTR MaLR 0 432 1 363 286 90 11 chr5 107982282 107982346 -91647804 - MLT1K LTR MaLR -369 219 161 333 198 36 130 chr5 107982916 107983108 -91647042 - L1MC4 LINE L1 0 8042 7869 1351 282 95 11 chr5 107983193 107983898 -91646252 - L1MC4 LINE L1 -166 7876 7113 701 0 0 0 chr5 107985204 107985338 -91644812 + L1PA3 LINE L1 6067 6200 0 2679 3 0 77 chr5 107985554 107985891 -91644259 + AluYa5 SINE Alu 1 311 0 493 226 24 0 chr5 107986234 107986358 -91643792 - L1M4 LINE L1 -868 5278 5152 223 237 0 0 chr5 107986372 107986431 -91643719 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 282 277 24 0 chr5 107986431 107986514 -91643636 - MLT1K LTR MaLR -157 431 347 212 216 31 41 chr5 107987496 107987593 -91642557 + (TAGA)n Simple_repeat Simple_repeat 1 96 0 193 378 96 0 chr5 107988132 107988267 -91641883 - L2 LINE L2 -2 3311 3164 2498 136 33 14 chr5 107988368 107988788 -91641362 + MSTA LTR MaLR 1 428 0 854 172 0 0 chr5 107989266 107989417 -91640733 - MSTB2 LTR MaLR 0 457 307 807 175 11 74 chr5 107989479 107989823 -91640327 - MER57A LTR ERV1 0 403 1 727 182 0 28 chr5 107989824 107989967 -91640183 - MER57A-int LTR ERV1 -2 7535 7397 365 208 66 0 chr5 107989967 107990073 -91640077 - LTR54B LTR ERV1 -160 338 226 717 129 26 0 chr5 107990137 107990253 -91639897 - LTR54B LTR ERV1 -379 119 1 3995 203 17 31 chr5 107990253 107991061 -91639089 - MER57A-int LTR ERV1 -393 7144 6349 1796 168 16 10 chr5 107991061 107991365 -91638785 + AluJb SINE Alu 1 306 -6 3995 203 17 31 chr5 107991365 107991491 -91638659 - MER57A-int LTR ERV1 -1188 6349 6223 263 257 14 0 chr5 107991445 107991515 -91638635 - MER70-int LTR ERVL -805 4218 4148 * 1656 185 33 14 chr5 107991849 107991927 -91638223 - MER57A-int LTR ERV1 -768 6180 6105 204 67 0 0 chr5 107991927 107991957 -91638193 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1656 185 33 14 chr5 107991957 107992307 -91637843 - MER57A-int LTR ERV1 -843 6105 3950 2683 171 2 19 chr5 107992651 107993173 -91636977 - MER57A-int LTR ERV1 -1716 5821 5309 40224 39 22 1 chr5 107993187 107999203 -91630947 + L1PA2 LINE L1 13 6155 0 3127 216 60 54 chr5 107999236 108000054 -91630096 - MER57A-int LTR ERV1 -1498 4744 3932 210 71 0 0 chr5 108000054 108000082 -91630068 + (TTA)n Simple_repeat Simple_repeat 2 29 0 3127 216 60 54 chr5 108000082 108000641 -91629509 - MER57A-int LTR ERV1 -2310 3932 1554 28 0 0 0 chr5 108000803 108000831 -91629319 + AT_rich Low_complexity Low_complexity 1 28 0 7531 45 0 1 chr5 108000831 108002529 -91627621 - L1PA4 LINE L1 -11 6144 4450 228 245 0 0 chr5 108002665 108002714 -91627436 + MER34 LTR ERV1 1 49 -493 1761 151 58 7 chr5 108002783 108003075 -91627075 - AluSx SINE Alu -5 307 1 755 206 86 14 chr5 108003307 108003516 -91626634 - MER34C LTR ERV1 -207 378 155 2513 104 94 10 chr5 108003752 108004155 -91625995 + MER41B LTR ERV1 1 437 -198 2015 129 50 15 chr5 108004154 108004494 -91625656 - THE1B LTR MaLR -12 352 1 * 1100 142 10 19 chr5 108004494 108004699 -91625451 + MER41B LTR ERV1 433 635 0 2909 224 30 56 chr5 108004699 108005542 -91624608 - MER57A-int LTR ERV1 -6712 825 5 600 174 18 0 chr5 108005546 108005655 -91624495 - MER57A LTR ERV1 0 403 293 1221 149 53 11 chr5 108005655 108005917 -91624233 + L1MB7 LINE L1 5898 6170 -14 207 105 0 26 chr5 108007328 108007366 -91622784 + (TTTTTG)n Simple_repeat Simple_repeat 1 37 0 2375 269 57 9 chr5 108007422 108008163 -91621987 + L2 LINE L2 2258 3032 -281 338 280 64 23 chr5 108008163 108008381 -91621769 - L1ME3A LINE L1 -270 5900 5674 241 330 98 0 chr5 108008407 108008610 -91621540 - L1ME3A LINE L1 -559 5611 5389 252 263 21 53 chr5 108008709 108008804 -91621346 - LTR33 LTR ERVL -132 389 298 435 291 16 66 chr5 108008837 108009019 -91621131 - LTR33 LTR ERVL -304 217 45 2236 111 12 12 chr5 108009019 108009362 -91620788 + THE1C LTR MaLR 1 343 -32 180 0 0 0 chr5 108009372 108009392 -91620758 + (TAA)n Simple_repeat Simple_repeat 2 21 0 316 299 104 8 chr5 108009476 108009610 -91620540 - L1ME3A LINE L1 -1880 4266 4120 713 238 67 33 chr5 108009742 108009952 -91620198 + MER58A DNA MER1_type 2 218 -6 460 264 74 43 chr5 108009987 108010150 -91620000 + LTR33 LTR ERVL 3 170 -351 321 256 48 87 chr5 108010459 108010689 -91619461 - L1ME3A LINE L1 -2380 3766 3546 2183 125 0 6 chr5 108010966 108011299 -91618851 - AluSx SINE Alu 0 333 3 311 246 87 26 chr5 108011301 108011496 -91618654 - L1ME3A LINE L1 -2972 3174 2968 336 130 101 14 chr5 108011499 108011568 -91618582 - L1MB8 LINE L1 -1 6177 6103 3175 162 38 22 chr5 108011587 108012253 -91617897 - L1MB4 LINE L1 0 6180 5505 935 210 56 102 chr5 108012253 108012439 -91617711 - LTR8A LTR ERV1 -1 726 533 2325 109 0 6 chr5 108012439 108012751 -91617399 - AluSg SINE Alu 0 310 1 935 210 56 102 chr5 108012751 108013025 -91617125 - LTR8A LTR ERV1 -194 533 287 285 185 179 55 chr5 108013197 108013345 -91616805 - MER87 LTR ERV1 -395 146 1 961 145 105 61 chr5 108013345 108013616 -91616534 - L1MB4 LINE L1 -671 5509 5232 1790 182 3 3 chr5 108013662 108013964 -91616186 - AluJb SINE Alu -10 302 1 26 50 0 0 chr5 108014130 108014170 -91615980 + AT_rich Low_complexity Low_complexity 1 40 0 375 256 116 16 chr5 108015118 108015247 -91614903 + L2 LINE L2 3172 3313 0 227 346 65 9 chr5 108015542 108015649 -91614501 + MER115 DNA AcHobo 9 121 -572 604 250 260 0 chr5 108015797 108016001 -91614149 + MER115 DNA AcHobo 420 676 -17 1972 102 49 7 chr5 108016041 108016325 -91613825 + AluSq SINE Alu 1 296 -17 207 0 0 0 chr5 108016329 108016352 -91613798 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2800 172 85 6 chr5 108016937 108018334 -91611816 - L1MA9 LINE L1 -1 6547 4933 6179 134 38 11 chr5 108018343 108019968 -91610182 - L1PA8 LINE L1 -3 6479 4750 2157 121 22 28 chr5 108019968 108020331 -91609819 + THE1B LTR MaLR 1 361 -3 11096 111 8 1 chr5 108020334 108021889 -91608261 + THE1B-int LTR MaLR 1 1567 -13 2054 128 39 28 chr5 108021891 108022251 -91607899 + THE1B LTR MaLR 1 364 0 18926 165 28 25 chr5 108022251 108026892 -91603258 - L1PA8 LINE L1 -1707 4754 6 7669 209 79 82 chr5 108026897 108027437 -91602713 - L1MA9 LINE L1 -1434 4948 4408 778 206 32 7 chr5 108027437 108027592 -91602558 + MER2 DNA MER2_type 1 159 -186 7669 209 79 82 chr5 108027592 108027635 -91602515 - L1MA9 LINE L1 -1974 4408 4366 321 273 0 0 chr5 108027635 108027701 -91602449 + MER2 DNA MER2_type 271 336 -9 7669 209 79 82 chr5 108027701 108031236 -91598914 - L1MA9 LINE L1 -2016 4366 911 565 172 52 0 chr5 108031249 108031365 -91598785 - L1MB7 LINE L1 -49 6135 6014 494 324 69 19 chr5 108031388 108031650 -91598500 + MLT1I LTR MaLR 133 407 -2 281 399 105 18 chr5 108032202 108032405 -91597745 + L2 LINE L2 2566 2801 -513 2498 159 49 2 chr5 108032405 108032851 -91597299 - MLT1C LTR MaLR 0 467 1 281 399 105 18 chr5 108032851 108032923 -91597227 + L2 LINE L2 2801 2865 -449 24 53 0 0 chr5 108033302 108033340 -91596810 + AT_rich Low_complexity Low_complexity 1 38 0 1803 154 3 10 chr5 108033425 108033723 -91596427 - AluJb SINE Alu -14 298 3 25 51 0 0 chr5 108034656 108034695 -91595455 + AT_rich Low_complexity Low_complexity 1 39 0 1800 184 0 3 chr5 108034960 108035253 -91594897 + AluJb SINE Alu 1 292 -20 384 22 0 0 chr5 108035886 108035931 -91594219 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 953 181 0 0 chr5 108035931 108036075 -91594075 - AluJb SINE Alu -37 275 132 186 103 0 0 chr5 108036422 108036451 -91593699 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 2025 135 7 0 chr5 108036458 108036740 -91593410 + AluSx SINE Alu 1 284 -28 261 57 0 0 chr5 108037341 108037376 -91592774 + (CA)n Simple_repeat Simple_repeat 1 35 0 643 147 39 32 chr5 108037651 108037807 -91592343 + Charlie5 DNA MER1_type 2428 2584 -28 245 121 0 0 chr5 108038152 108038185 -91591965 + Alu SINE Alu 2 34 -269 2226 115 0 0 chr5 108038192 108038488 -91591662 + AluSq SINE Alu 1 296 -17 1613 165 52 0 chr5 108038488 108038754 -91591396 - AluJb SINE Alu -31 281 1 30 27 0 0 chr5 108038771 108038808 -91591342 + AT_rich Low_complexity Low_complexity 1 37 0 1853 191 0 0 chr5 108039117 108039426 -91590724 + AluJo SINE Alu 4 312 0 2135 183 50 48 chr5 108039562 108040066 -91590084 + MLT1D LTR MaLR 1 505 0 21 36 0 0 chr5 108041093 108041121 -91589029 + AT_rich Low_complexity Low_complexity 1 28 0 1826 166 0 7 chr5 108042091 108042394 -91587756 + AluSx SINE Alu 1 301 0 2015 125 10 3 chr5 108042513 108042802 -91587348 + AluSq SINE Alu 3 293 -20 395 301 69 35 chr5 108043395 108043568 -91586582 - MIR SINE MIR -63 199 21 24 32 0 0 chr5 108043698 108043729 -91586421 + AT_rich Low_complexity Low_complexity 1 31 0 2266 107 0 0 chr5 108044341 108044632 -91585518 - AluSg SINE Alu -19 291 1 445 307 79 26 chr5 108044705 108044894 -91585256 - MIR SINE MIR 0 262 64 1417 174 93 0 chr5 108044952 108045210 -91584940 - AluJb SINE Alu -30 282 1 25 0 0 0 chr5 108045406 108045431 -91584719 + AT_rich Low_complexity Low_complexity 1 25 0 510 288 92 11 chr5 108045588 108045772 -91584378 + MLT1J LTR MaLR 101 299 -212 24 32 0 0 chr5 108045818 108045849 -91584301 + AT_rich Low_complexity Low_complexity 1 31 0 2808 235 174 31 chr5 108046025 108046553 -91583597 - Charlie7 DNA MER1_type -1199 1413 962 1540 159 88 11 chr5 108046553 108046836 -91583314 - AluJb SINE Alu -7 305 1 198 0 0 0 chr5 108046836 108046858 -91583292 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1465 200 32 25 chr5 108046858 108047143 -91583007 - AluJo SINE Alu -25 287 1 2808 235 174 31 chr5 108047143 108047388 -91582762 - Charlie7 DNA MER1_type -1650 962 753 2823 181 24 15 chr5 108047388 108047930 -91582220 - MER44D DNA MER2_type -3 602 1 2808 235 174 31 chr5 108047930 108048359 -91581791 - Charlie7 DNA MER1_type -1859 753 35 1837 174 33 30 chr5 108048803 108049081 -91581069 + MER119 DNA MER1_type 102 383 -200 1222 165 139 30 chr5 108049081 108049348 -91580802 + AluSg1 SINE Alu 1 296 -13 1837 174 33 30 chr5 108049348 108049437 -91580713 + MER119 DNA MER1_type 383 470 -113 1605 167 167 4 chr5 108049483 108049896 -91580254 + MER68 LTR ERV1 15 562 0 1063 168 0 0 chr5 108050253 108050408 -91579742 - AluJb SINE Alu -24 288 134 2015 127 3 0 chr5 108050408 108050692 -91579458 - AluSx SINE Alu -15 297 13 252 279 245 7 chr5 108050701 108050848 -91579302 - MIR3 SINE MIR -9 199 18 1010 231 4 40 chr5 108051505 108051752 -91578398 - MER8 DNA MER2_type 0 239 2 202 250 0 33 chr5 108052028 108052088 -91578062 - L2 LINE L2 -77 3236 3179 384 327 55 39 chr5 108052114 108052371 -91577779 + MARNA DNA Mariner 137 397 -189 461 311 8 0 chr5 108054070 108054189 -91575961 + L2 LINE L2 3190 3309 -4 311 311 120 0 chr5 108055610 108055777 -91574373 + LTR33 LTR ERVL 328 514 -7 1924 235 37 19 chr5 108056281 108057273 -91572877 + L1ME LINE L1 4729 5738 -424 249 139 0 0 chr5 108057363 108057399 -91572751 - MER5C DNA MER1_type 0 324 289 204 397 35 26 chr5 108059293 108059409 -91570741 - L2 LINE L2 -50 3222 3106 1783 162 24 56 chr5 108059686 108059973 -91570177 - MLT1A1 LTR MaLR 0 365 91 2223 123 0 0 chr5 108059973 108060273 -91569877 - AluSx SINE Alu -12 300 1 1783 162 24 56 chr5 108060273 108060362 -91569788 - MLT1A1 LTR MaLR -274 91 1 251 380 48 30 chr5 108060654 108060820 -91569330 - L2 LINE L2 -586 2728 2560 371 300 83 17 chr5 108061546 108061666 -91568484 - L2 LINE L2 0 3313 3186 2538 155 33 20 chr5 108061674 108062165 -91567985 + L1MB3 LINE L1 5684 6180 -3 279 320 109 0 chr5 108062189 108062345 -91567805 - L2 LINE L2 -1606 1708 1536 2651 225 88 4 chr5 108062497 108063805 -91566345 + L1ME1 LINE L1 4549 5959 -207 30 0 0 0 chr5 108063805 108063835 -91566315 + AT_rich Low_complexity Low_complexity 1 30 0 299 224 104 0 chr5 108063851 108063918 -91566232 + Tigger3(Golem) DNA MER2_type 7 80 -2949 440 260 39 0 chr5 108064050 108064154 -91565996 + Tigger3(Golem) DNA MER2_type 2920 3027 -2 464 331 51 6 chr5 108064189 108064364 -91565786 - MIR SINE MIR -76 186 4 189 339 68 0 chr5 108064506 108064565 -91565585 + L2 LINE L2 3209 3271 -1 532 301 42 32 chr5 108067753 108067969 -91562181 - MIR SINE MIR -44 218 1 512 268 59 33 chr5 108068402 108068674 -91561476 + L1MC4 LINE L1 7764 8042 0 192 267 153 97 chr5 108068804 108068980 -91561170 - L2 LINE L2 -219 3053 2868 496 240 198 5 chr5 108069607 108069799 -91560351 - MIR SINE MIR -3 259 31 620 168 193 19 chr5 108069799 108069960 -91560190 + MER5A DNA MER1_type 1 189 0 312 293 68 45 chr5 108070071 108070204 -91559946 + MER5A DNA MER1_type 54 189 0 2449 61 3 0 chr5 108070449 108070745 -91559405 + AluY SINE Alu 1 297 -14 282 286 54 45 chr5 108070887 108070999 -91559151 + MIR SINE MIR 26 138 -124 535 261 61 0 chr5 108071596 108071711 -91558439 - MER5B DNA MER1_type -3 175 54 605 227 113 27 chr5 108071713 108071898 -91558252 - MIR SINE MIR -50 212 12 256 328 84 8 chr5 108071968 108072087 -91558063 + L2 LINE L2 1698 1825 -1489 1894 118 4 0 chr5 108072087 108072350 -91557800 - AluSx SINE Alu -15 297 34 602 330 60 26 chr5 108072374 108072638 -91557512 + L2 LINE L2 2778 3050 -263 3147 83 11 41 chr5 108072938 108073405 -91556745 - MLT2A2 LTR ERVL 0 453 1 207 257 14 29 chr5 108073652 108073722 -91556428 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 283 323 110 0 chr5 108073840 108073967 -91556183 + L2 LINE L2 3167 3307 -6 195 252 261 45 chr5 108074068 108074179 -91555971 - MIR SINE MIR -14 248 114 24 32 0 0 chr5 108074483 108074514 -91555636 + AT_rich Low_complexity Low_complexity 1 31 0 342 0 0 0 chr5 108074837 108074875 -91555275 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 813 219 0 0 chr5 108074875 108075021 -91555129 - FRAM SINE Alu -30 146 1 1711 188 55 9 chr5 108077632 108077961 -91552189 + MER2 DNA MER2_type 1 344 0 24 0 0 0 chr5 108078109 108078133 -91552017 + AT_rich Low_complexity Low_complexity 1 24 0 2299 81 0 17 chr5 108078710 108079007 -91551143 + AluY SINE Alu 1 292 -19 23 68 0 0 chr5 108079727 108079771 -91550379 + AT_rich Low_complexity Low_complexity 1 44 0 759 242 170 29 chr5 108080134 108080552 -91549598 - L1ME4a LINE L1 -5 6116 5640 719 224 57 29 chr5 108081599 108081809 -91548341 - MIR SINE MIR 0 262 47 1531 193 17 10 chr5 108081882 108082178 -91547972 - AluJo SINE Alu -13 299 2 2206 112 0 3 chr5 108082419 108082723 -91547427 - AluSx SINE Alu -9 303 1 472 350 46 17 chr5 108083308 108083545 -91546605 - MIR SINE MIR -6 256 13 2484 50 0 0 chr5 108083614 108083912 -91546238 - AluY SINE Alu -13 298 1 314 248 92 48 chr5 108084457 108084663 -91545487 - L1ME4a LINE L1 -260 5861 5647 995 209 82 5 chr5 108085309 108085529 -91544621 - MER8 DNA MER2_type 0 239 3 567 167 26 0 chr5 108085735 108085849 -91544301 + L1MA3 LINE L1 13 129 -7436 4326 152 32 153 chr5 108085852 108087017 -91543133 + L1MA3 LINE L1 1849 2828 -4737 2409 24 41 0 chr5 108087017 108087307 -91542843 + AluY SINE Alu 1 302 -9 4326 152 32 153 chr5 108087307 108087501 -91542649 + L1MA3 LINE L1 2828 3044 -4521 909 80 0 0 chr5 108087501 108087614 -91542536 + AluY SINE Alu 1 113 -198 5212 142 159 68 chr5 108087626 108089029 -91541121 - pTR5 LTR ERV1 -143 2295 765 1581 61 0 24 chr5 108089029 108089242 -91540908 + AluY SINE Alu 91 298 -13 1909 160 49 15 chr5 108089245 108089652 -91540498 + L1MA3 LINE L1 3032 3452 -4113 1263 184 53 4 chr5 108089664 108089908 -91540242 - AluJb SINE Alu -27 285 30 759 191 21 34 chr5 108089919 108090137 -91540013 + L1MA3 LINE L1 3439 3653 -3912 * 7670 161 35 6 chr5 108090135 108092483 -91537667 + L1MA3 LINE L1 5308 7724 0 235 302 170 45 chr5 108093428 108093693 -91536457 + L1MC/D LINE L1 5314 5611 -2197 1214 288 38 11 chr5 108093707 108094151 -91535999 + L1ME3A LINE L1 5415 5870 -300 1104 222 68 19 chr5 108094600 108094924 -91535226 - Charlie4a DNA MER1_type -1 507 168 291 347 85 6 chr5 108094942 108095118 -91535032 + L2 LINE L2 2660 2849 -465 211 211 0 0 chr5 108095544 108095582 -91534568 + (CATA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr5 108095972 108095995 -91534155 + AT_rich Low_complexity Low_complexity 1 23 0 2298 81 7 0 chr5 108096149 108096445 -91533705 - AluSg SINE Alu -12 298 1 22 0 0 0 chr5 108096632 108096654 -91533496 + AT_rich Low_complexity Low_complexity 1 22 0 1691 168 10 3 chr5 108096943 108097235 -91532915 + AluSx SINE Alu 3 296 -16 234 0 0 0 chr5 108097294 108097320 -91532830 + (T)n Simple_repeat Simple_repeat 1 26 0 470 120 40 0 chr5 108098475 108098550 -91531600 - MER46A DNA MER2_type -2 234 157 234 286 14 14 chr5 108098510 108098580 -91531570 + MER46A DNA MER2_type 99 168 -68 * 27 29 0 0 chr5 108101251 108101285 -91528865 + AT_rich Low_complexity Low_complexity 1 34 0 2136 114 10 7 chr5 108101867 108102174 -91527976 - AluSx SINE Alu 0 312 5 659 275 35 8 chr5 108103100 108103325 -91526825 + L1ME LINE L1 5497 5728 -393 1198 49 7 0 chr5 108103949 108104092 -91526058 + AluSq/x SINE Alu 1 144 -168 497 105 0 0 chr5 108104098 108104174 -91525976 + Alu SINE Alu 227 302 -10 21 36 0 0 chr5 108105027 108105055 -91525095 + AT_rich Low_complexity Low_complexity 1 28 0 1616 174 3 30 chr5 108105092 108105391 -91524759 + AluJb SINE Alu 1 291 -21 1075 258 93 114 chr5 108105794 108106105 -91524045 - L1ME3A LINE L1 -5 6165 5849 4097 142 26 11 chr5 108106105 108106831 -91523319 - L1MA8 LINE L1 -6 6285 5549 1075 258 93 114 chr5 108106831 108106977 -91523173 - L1ME3A LINE L1 -321 5849 5702 812 172 108 64 chr5 108106977 108107180 -91522970 - MER58C DNA MER1_type -3 212 1 1075 258 93 114 chr5 108107180 108107410 -91522740 - L1ME3A LINE L1 -468 5702 5469 7386 32 23 0 chr5 108107410 108108462 -91521688 - L1PA5 LINE L1 -1 6153 5098 1075 258 93 114 chr5 108108462 108108803 -91521347 - L1ME3A LINE L1 -701 5469 5174 2029 154 0 0 chr5 108108803 108109115 -91521035 - AluJo SINE Alu 0 312 1 1075 258 93 114 chr5 108109115 108109493 -91520657 - L1ME3A LINE L1 -996 5174 4790 980 256 214 31 chr5 108109557 108110550 -91519600 - L1ME3A LINE L1 -1481 4665 3491 24 0 0 0 chr5 108110593 108110617 -91519533 + AT_rich Low_complexity Low_complexity 1 24 0 352 273 84 17 chr5 108110633 108110871 -91519279 - L1ME3A LINE L1 -2809 3337 3084 546 257 148 5 chr5 108111367 108111569 -91518581 + MIR SINE MIR 6 236 -26 717 218 26 26 chr5 108111709 108111865 -91518285 - Tigger2 DNA MER2_type 0 2718 2563 8542 118 14 4 chr5 108111866 108113126 -91517024 + HSMAR2 DNA Mariner 28 1299 -3 354 111 111 0 chr5 108113129 108113201 -91516949 - Tigger2 DNA MER2_type -153 2565 2486 1355 123 58 8 chr5 108113203 108113446 -91516704 - Tigger2 DNA MER2_type -194 2524 2270 357 191 0 0 chr5 108113438 108113501 -91516649 - Tigger2 DNA MER2_type -2655 63 1 * 1720 115 58 10 chr5 108114958 108115253 -91514897 - L1MC1 LINE L1 0 6333 6025 25 31 0 0 chr5 108116672 108116704 -91513446 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 108117748 108117776 -91512374 + AT_rich Low_complexity Low_complexity 1 28 0 493 256 118 86 chr5 108118062 108118444 -91511706 - L1ME4a LINE L1 -4 6117 5724 290 257 1 0 chr5 108118493 108118569 -91511581 - L1ME4a LINE L1 -552 5569 5494 21 0 0 0 chr5 108118571 108118592 -91511558 + AT_rich Low_complexity Low_complexity 1 21 0 213 297 14 14 chr5 108118912 108118986 -91511164 + CT-rich Low_complexity Low_complexity 2 75 0 205 304 0 0 chr5 108120552 108120598 -91509552 - L2 LINE L2 -27 3245 3200 1762 275 77 7 chr5 108120781 108121330 -91508820 - MLT1G1 LTR MaLR -8 587 1 414 310 230 0 chr5 108122061 108122235 -91507915 - L2 LINE L2 -536 2778 2565 251 241 0 0 chr5 108123254 108123312 -91506838 + MIR3 SINE MIR 150 207 -1 1333 153 31 9 chr5 108123676 108123905 -91506245 - MER46A DNA MER2_type -1 235 2 894 284 35 9 chr5 108124861 108125209 -91504941 - L1ME4a LINE L1 -1312 4834 4478 305 104 0 0 chr5 108125222 108125270 -91504880 - MADE1 DNA Mariner -27 53 6 354 269 11 115 chr5 108125277 108125537 -91504613 - L1ME4a LINE L1 -1701 4445 4213 234 224 204 79 chr5 108125544 108125696 -91504454 - L1ME4a LINE L1 -2027 4119 3949 * 331 268 54 10 chr5 108125693 108125853 -91504297 - L1ME3A LINE L1 -256 5906 5742 340 323 108 0 chr5 108125865 108125995 -91504155 + L2 LINE L2 3129 3272 0 30 59 0 0 chr5 108126743 108126794 -91503356 + AT_rich Low_complexity Low_complexity 1 51 0 2296 84 7 3 chr5 108127018 108127316 -91502834 + AluY SINE Alu 1 299 -12 21 0 0 0 chr5 108127437 108127458 -91502692 + AT_rich Low_complexity Low_complexity 1 21 0 2099 97 0 14 chr5 108127736 108128046 -91502104 + AluSx SINE Alu 1 306 0 333 0 0 0 chr5 108129627 108129664 -91500486 + (T)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr5 108130135 108130156 -91499994 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 108133872 108133893 -91496257 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr5 108134128 108134164 -91495986 + AT_rich Low_complexity Low_complexity 1 36 0 24 85 0 0 chr5 108135236 108135295 -91494855 + AT_rich Low_complexity Low_complexity 1 59 0 198 0 0 0 chr5 108136048 108136070 -91494080 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 414 185 148 30 chr5 108137953 108138088 -91492062 - MER103 DNA DNA -3 163 13 198 296 23 0 chr5 108139588 108139632 -91490518 - MIR SINE MIR -124 84 40 1337 176 59 0 chr5 108140618 108140857 -91489293 - AluJo SINE Alu -12 300 48 233 201 21 28 chr5 108140935 108141001 -91489149 + AluJ/monomer SINE Alu 1 36 -264 710 188 0 43 chr5 108141789 108141927 -91488223 + FLAM_A SINE Alu 1 132 -1 731 254 86 17 chr5 108142306 108142538 -91487612 + MIR SINE MIR 15 262 0 521 279 98 11 chr5 108142941 108143124 -91487026 - MIR SINE MIR -44 218 20 260 288 62 12 chr5 108143178 108143258 -91486892 - L1MEc LINE L1 -2282 3933 3850 249 292 56 42 chr5 108143340 108143484 -91486666 - L2 LINE L2 -1199 2115 1970 691 172 61 71 chr5 108143531 108143729 -91486421 - L1MEc LINE L1 -2406 3809 3614 1588 218 112 85 chr5 108143764 108144020 -91486130 - L1MEc LINE L1 -2701 3514 3266 2380 84 0 7 chr5 108144020 108144328 -91485822 - AluSx SINE Alu -6 306 1 1588 218 112 85 chr5 108144328 108145156 -91484994 - L1MEc LINE L1 -2949 3266 2401 2112 283 41 19 chr5 108145180 108146081 -91484069 - L1MEc LINE L1 -4089 2307 1387 1920 236 123 47 chr5 108146150 108147003 -91483147 - L1MEc LINE L1 -5127 1078 161 1710 184 0 7 chr5 108147065 108147388 -91482762 - AluJb SINE Alu 0 321 1 538 307 43 31 chr5 108147502 108147756 -91482394 - L2 LINE L2 -906 2408 2152 21 71 0 0 chr5 108148719 108148761 -91481389 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr5 108149756 108149778 -91480372 + AT_rich Low_complexity Low_complexity 1 22 0 981 190 0 0 chr5 108150901 108151059 -91479091 - FRAM SINE Alu -19 157 1 5508 35 39 4 chr5 108151310 108152002 -91478148 - L1PA6 LINE L1 -3 6151 5436 303 284 85 39 chr5 108152104 108152467 -91477683 - L1M4 LINE L1 -3625 2521 2142 302 281 27 19 chr5 108152531 108152648 -91477502 - MLT1L LTR MaLR -13 602 459 402 281 0 0 chr5 108152977 108153066 -91477084 - MER20 DNA MER1_type -11 208 120 2168 227 63 39 chr5 108153071 108153710 -91476440 - MER76 LTR ERV -34 654 1 512 212 53 9 chr5 108153710 108153818 -91476332 - MER20 DNA MER1_type -106 113 1 26 50 0 0 chr5 108154004 108154044 -91476106 + AT_rich Low_complexity Low_complexity 1 40 0 203 171 0 0 chr5 108154456 108154497 -91475653 + T-rich Low_complexity Low_complexity 1 41 0 2318 100 7 0 chr5 108154529 108154838 -91475312 - AluSq SINE Alu -2 311 1 22 35 0 0 chr5 108155849 108155878 -91474272 + AT_rich Low_complexity Low_complexity 1 29 0 207 100 0 0 chr5 108156189 108156219 -91473931 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 291 203 0 76 chr5 108156903 108156982 -91473168 + MIR3 SINE MIR 4 76 -132 283 345 109 0 chr5 108158132 108158251 -91471899 - L2 LINE L2 -3 3310 3179 23 0 0 0 chr5 108159418 108159441 -91470709 + AT_rich Low_complexity Low_complexity 1 23 0 427 103 0 0 chr5 108159473 108159541 -91470609 + L1PA15 LINE L1 6095 6162 -3 639 240 145 13 chr5 108159807 108160111 -91470039 - HAL1 LINE L1 -139 2368 2025 5769 102 36 7 chr5 108160647 108161681 -91468469 + L1PA15 LINE L1 5104 6164 -1 2130 116 0 25 chr5 108161913 108162233 -91467917 - AluSx SINE Alu 0 312 1 21 71 0 0 chr5 108162313 108162355 -91467795 + AT_rich Low_complexity Low_complexity 1 42 0 399 299 72 60 chr5 108162855 108163173 -91466977 - HAL1 LINE L1 -2185 322 1 222 347 74 50 chr5 108163370 108163491 -91466659 + MIR SINE MIR 1 124 -138 2062 129 3 0 chr5 108164370 108164664 -91465486 + AluSx SINE Alu 1 295 -17 220 319 91 42 chr5 108164715 108164905 -91465245 - MIR SINE MIR -38 224 19 1798 91 0 28 chr5 108165164 108165418 -91464732 + AluY SINE Alu 40 286 -25 6919 52 7 13 chr5 108165433 108166650 -91463500 - L1PA7 LINE L1 -21 6133 4924 256 289 54 80 chr5 108166662 108166766 -91463384 + MIR SINE MIR 4 109 -153 2202 51 3 70 chr5 108166766 108167079 -91463071 - AluY SINE Alu -19 292 1 256 289 54 80 chr5 108167079 108167153 -91462997 + MIR SINE MIR 109 174 -88 246 32 0 0 chr5 108167153 108167184 -91462966 + (TG)n Simple_repeat Simple_repeat 1 31 0 256 289 54 80 chr5 108167184 108167241 -91462909 + MIR SINE MIR 174 231 -31 21 36 0 0 chr5 108168225 108168253 -91461897 + AT_rich Low_complexity Low_complexity 1 28 0 259 262 65 0 chr5 108168847 108168954 -91461196 + MER103 DNA DNA 31 144 -22 487 206 110 58 chr5 108169068 108169223 -91460927 + MIR SINE MIR 29 191 -71 3486 205 14 31 chr5 108169718 108170114 -91460036 + L1PA16 LINE L1 9 388 -6461 2177 112 0 0 chr5 108170114 108170418 -91459732 - AluSq SINE Alu -9 304 1 3486 205 14 31 chr5 108170418 108170759 -91459391 + L1PA16 LINE L1 388 733 -6116 320 220 20 30 chr5 108171273 108171373 -91458777 + L1PA16 LINE L1 1432 1530 -5320 2568 146 21 9 chr5 108171384 108171755 -91458395 + MER57B LTR ERV1 1 379 -55 207 0 0 0 chr5 108171755 108171778 -91458372 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2568 146 21 9 chr5 108171778 108171825 -91458325 + MER57B LTR ERV1 379 424 -10 3529 218 34 27 chr5 108171871 108173140 -91457010 + L1PA16 LINE L1 1668 2927 -3942 750 169 0 29 chr5 108173140 108173276 -91456874 + FLAM_C SINE Alu 2 133 0 3529 218 34 27 chr5 108173276 108177028 -91453122 + L1PA16 LINE L1 2927 6869 0 2184 109 27 35 chr5 108177268 108177643 -91452507 - THE1C LTR MaLR 0 375 4 880 217 115 84 chr5 108177727 108178109 -91452041 - MSTD LTR MaLR -2 394 1 2012 173 18 18 chr5 108178189 108178577 -91451573 + MLT1B LTR MaLR 3 390 0 353 167 103 0 chr5 108178897 108178975 -91451175 + MIR SINE MIR 131 216 -46 224 337 35 0 chr5 108179272 108179358 -91450792 + MIR SINE MIR 53 141 -121 387 262 25 25 chr5 108179362 108179484 -91450666 - L2 LINE L2 -3 3310 3189 226 254 18 0 chr5 108181155 108181210 -91448940 + L2 LINE L2 3258 3313 0 242 237 161 25 chr5 108181476 108181594 -91448556 - MER103 DNA DNA -18 148 15 737 244 129 14 chr5 108182027 108182236 -91447914 - MIR SINE MIR -7 255 23 291 247 89 38 chr5 108182681 108182839 -91447311 - L1ME4a LINE L1 -13 6108 5943 23 105 0 0 chr5 108183287 108183373 -91446777 + AT_rich Low_complexity Low_complexity 1 86 0 191 192 13 0 chr5 108183377 108183455 -91446695 + (TA)n Simple_repeat Simple_repeat 2 80 0 24 32 0 0 chr5 108183455 108183486 -91446664 + AT_rich Low_complexity Low_complexity 1 31 0 279 136 81 6 chr5 108183488 108183732 -91446418 + (TA)n Simple_repeat Simple_repeat 1 262 0 336 263 23 88 chr5 108183775 108183896 -91446254 - L1MC4 LINE L1 -2 8040 7913 189 0 0 0 chr5 108183896 108183917 -91446233 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 432 37 0 0 chr5 108183916 108183970 -91446180 + (CA)n Simple_repeat Simple_repeat 1 54 0 336 263 23 88 chr5 108183917 108184019 -91446131 - L1MC4 LINE L1 -129 7913 7881 720 264 115 40 chr5 108184027 108184323 -91445827 + L1MC4 LINE L1 7207 7524 -518 6176 239 46 14 chr5 108184354 108186351 -91443799 + L1ME1 LINE L1 2592 4651 -1495 2631 240 87 34 chr5 108186344 108187333 -91442817 + L1ME1 LINE L1 5129 6161 -5 * 249 83 0 0 chr5 108187658 108187694 -91442456 + (TC)n Simple_repeat Simple_repeat 2 37 0 1895 142 42 27 chr5 108187718 108188050 -91442100 + MER1B DNA MER1_type 1 337 0 2518 156 53 2 chr5 108188490 108188925 -91441225 + MSTB2 LTR MaLR 1 457 0 2003 116 3 3 chr5 108189052 108189337 -91440813 - AluSq SINE Alu -6 307 23 243 125 0 0 chr5 108189842 108189882 -91440268 + (CAT)n Simple_repeat Simple_repeat 2 41 0 272 70 23 0 chr5 108189917 108189960 -91440190 + (CA)n Simple_repeat Simple_repeat 1 44 0 188 114 29 29 chr5 108190122 108190157 -91439993 - MIR SINE MIR -9 253 219 264 209 0 0 chr5 108190492 108190578 -91439572 + CT-rich Low_complexity Low_complexity 1 86 0 387 89 0 0 chr5 108190592 108190648 -91439502 + (CA)n Simple_repeat Simple_repeat 2 57 0 214 292 229 0 chr5 108193151 108193247 -91436903 - MIR SINE MIR -122 140 23 25 0 0 0 chr5 108193626 108193651 -91436499 + AT_rich Low_complexity Low_complexity 1 25 0 4375 156 12 6 chr5 108193776 108194690 -91435460 - L1PA15 LINE L1 -723 5442 4527 4485 142 16 1 chr5 108194690 108195396 -91434754 + L1PA15 LINE L1 5442 6162 -3 4515 184 28 59 chr5 108195620 108196713 -91433437 - L1MD1 LINE L1 -1 6241 5216 1518 199 3 33 chr5 108196713 108197020 -91433130 - AluJo SINE Alu -14 298 1 4515 184 28 59 chr5 108197020 108197580 -91432570 - L1MD1 LINE L1 -1026 5216 4640 3422 202 62 49 chr5 108197597 108197732 -91432418 - L1MD1 LINE L1 -1606 4540 4408 1361 201 108 0 chr5 108197732 108198001 -91432149 - AluJo SINE Alu -14 298 1 3422 202 62 49 chr5 108198001 108198920 -91431230 - L1MD1 LINE L1 -1738 4408 3473 396 109 94 0 chr5 108198923 108198987 -91431163 - L1MDa LINE L1 -6457 83 14 505 294 104 0 chr5 108199038 108199259 -91430891 - L1MC4a LINE L1 -1894 5914 5671 342 0 0 0 chr5 108199626 108199664 -91430486 + (TG)n Simple_repeat Simple_repeat 2 39 0 254 359 61 8 chr5 108200013 108200144 -91430006 + L2 LINE L2 3116 3253 -19 257 333 24 24 chr5 108200629 108200713 -91429437 - MIR3 SINE MIR -38 170 87 186 261 185 43 chr5 108200721 108200813 -91429337 - L2 LINE L2 -20 3293 3189 545 170 87 147 chr5 108201070 108201288 -91428862 + MER63A DNA MER1_type 2 206 -4 461 336 189 7 chr5 108201331 108201611 -91428539 - L2 LINE L2 -15 3257 2927 238 377 19 19 chr5 108201669 108201828 -91428322 + L2 LINE L2 2249 2407 -907 610 276 138 42 chr5 108202528 108202978 -91427172 + LTR33A LTR ERVL 29 523 0 213 208 13 78 chr5 108204443 108204520 -91425630 + MIR SINE MIR 118 189 -73 228 86 0 0 chr5 108205133 108205168 -91424982 + (GGA)n Simple_repeat Simple_repeat 1 35 0 335 302 107 78 chr5 108205491 108206080 -91424070 - L1M2 LINE L1 -5580 1269 664 318 26 0 0 chr5 108206500 108206539 -91423611 + (TG)n Simple_repeat Simple_repeat 1 39 0 830 37 0 9 chr5 108208080 108208187 -91421963 + (TTTC)n Simple_repeat Simple_repeat 3 108 0 229 298 136 35 chr5 108208912 108209140 -91421010 - MIR SINE MIR -2 260 10 477 62 0 0 chr5 108210056 108210121 -91420029 + (GGA)n Simple_repeat Simple_repeat 1 65 0 359 125 0 18 chr5 108210849 108210905 -91419245 - MER94 DNA DNA -55 79 25 217 238 48 16 chr5 108211047 108211110 -91419040 - L2 LINE L2 0 3313 3249 830 37 0 9 chr5 108211583 108211690 -91418460 + (GAAA)n Simple_repeat Simple_repeat 3 108 0 318 26 0 0 chr5 108213231 108213270 -91416880 + (CA)n Simple_repeat Simple_repeat 1 39 0 335 302 107 78 chr5 108213690 108214279 -91415871 + L1M2 LINE L1 664 1269 -5580 228 86 0 0 chr5 108214602 108214637 -91415513 + (TCC)n Simple_repeat Simple_repeat 1 35 0 213 208 13 78 chr5 108215250 108215327 -91414823 - MIR SINE MIR -73 189 118 610 276 138 42 chr5 108216792 108217242 -91412908 - LTR33A LTR ERVL 0 523 29 238 377 19 19 chr5 108217942 108218101 -91412049 - L2 LINE L2 -907 2407 2249 461 336 189 7 chr5 108218159 108218439 -91411711 + L2 LINE L2 2927 3257 -15 545 170 87 147 chr5 108218482 108218700 -91411450 - MER63A DNA MER1_type -4 206 2 186 261 185 43 chr5 108218957 108219049 -91411101 + L2 LINE L2 3189 3293 -20 257 333 24 24 chr5 108219057 108219141 -91411009 + MIR3 SINE MIR 87 170 -38 254 359 61 8 chr5 108219626 108219757 -91410393 - L2 LINE L2 -19 3253 3116 342 0 0 0 chr5 108220106 108220144 -91410006 + (CA)n Simple_repeat Simple_repeat 2 39 0 505 294 104 0 chr5 108220511 108220732 -91409418 + L1MC4a LINE L1 5671 5914 -1894 396 109 94 0 chr5 108220783 108220847 -91409303 + L1MDa LINE L1 14 83 -6457 3422 202 62 49 chr5 108220850 108221769 -91408381 + L1MD1 LINE L1 3473 4408 -1738 1361 201 108 0 chr5 108221769 108222038 -91408112 + AluJo SINE Alu 1 298 -14 3422 202 62 49 chr5 108222038 108222173 -91407977 + L1MD1 LINE L1 4408 4540 -1606 4515 184 28 59 chr5 108222190 108222750 -91407400 + L1MD1 LINE L1 4640 5216 -1026 1518 199 3 33 chr5 108222750 108223057 -91407093 + AluJo SINE Alu 1 298 -14 4515 184 28 59 chr5 108223057 108224150 -91406000 + L1MD1 LINE L1 5216 6241 -1 4485 142 16 1 chr5 108224374 108225085 -91405065 - L1PA15 LINE L1 -3 6162 5442 4370 156 12 5 chr5 108225086 108225994 -91404156 + L1PA15 LINE L1 4532 5442 -723 25 0 0 0 chr5 108226119 108226144 -91404006 + AT_rich Low_complexity Low_complexity 1 25 0 214 292 229 0 chr5 108226523 108226619 -91403531 + MIR SINE MIR 23 140 -122 387 89 0 0 chr5 108229122 108229178 -91400972 + (TG)n Simple_repeat Simple_repeat 2 57 0 264 209 0 0 chr5 108229192 108229278 -91400872 + GA-rich Low_complexity Low_complexity 1 86 0 188 114 29 29 chr5 108229613 108229648 -91400502 + MIR SINE MIR 219 253 -9 272 70 23 0 chr5 108229810 108229853 -91400297 + (TG)n Simple_repeat Simple_repeat 1 44 0 243 125 0 0 chr5 108229888 108229928 -91400222 + (ATG)n Simple_repeat Simple_repeat 2 41 0 2003 116 3 3 chr5 108230433 108230718 -91399432 + AluSq SINE Alu 23 307 -6 2518 156 53 2 chr5 108230845 108231280 -91398870 - MSTB2 LTR MaLR 0 457 1 1895 142 42 27 chr5 108231720 108232052 -91398098 - MER1B DNA MER1_type 0 337 1 249 83 0 0 chr5 108232076 108232112 -91398038 + (GA)n Simple_repeat Simple_repeat 2 37 0 2631 240 87 34 chr5 108232437 108233426 -91396724 - L1ME1 LINE L1 -5 6161 5129 * 6176 239 46 14 chr5 108233419 108235416 -91394734 - L1ME1 LINE L1 -1495 4651 2592 720 264 115 40 chr5 108235447 108235743 -91394407 - L1MC4 LINE L1 -518 7524 7207 336 263 23 88 chr5 108235751 108235800 -91394350 + L1MC4 LINE L1 7881 7932 -110 432 37 0 0 chr5 108235800 108235854 -91394296 + (TG)n Simple_repeat Simple_repeat 1 54 0 189 0 0 0 chr5 108235853 108235874 -91394276 + (GA)n Simple_repeat Simple_repeat 1 21 0 * 336 263 23 88 chr5 108235854 108235995 -91394155 + L1MC4 LINE L1 7932 8040 -2 203 141 71 24 chr5 108236038 108236123 -91394027 + (TA)n Simple_repeat Simple_repeat 1 89 0 * 211 173 67 0 chr5 108236064 108236139 -91394011 + (TATAA)n Simple_repeat Simple_repeat 1 80 0 279 134 84 0 chr5 108236140 108236282 -91393868 + (TA)n Simple_repeat Simple_repeat 2 155 0 24 32 0 0 chr5 108236284 108236315 -91393835 + AT_rich Low_complexity Low_complexity 1 31 0 191 192 13 0 chr5 108236315 108236393 -91393757 + (TA)n Simple_repeat Simple_repeat 1 79 0 23 105 0 0 chr5 108236397 108236483 -91393667 + AT_rich Low_complexity Low_complexity 1 86 0 291 247 89 38 chr5 108236931 108237089 -91393061 + L1ME4a LINE L1 5943 6108 -13 737 244 129 14 chr5 108237534 108237743 -91392407 + MIR SINE MIR 23 255 -7 242 237 161 25 chr5 108238176 108238294 -91391856 + MER103 DNA DNA 15 148 -18 226 254 18 0 chr5 108238560 108238615 -91391535 - L2 LINE L2 0 3313 3258 387 262 25 25 chr5 108240286 108240408 -91389742 + L2 LINE L2 3189 3310 -3 224 337 35 0 chr5 108240412 108240498 -91389652 - MIR SINE MIR -121 141 53 353 167 103 0 chr5 108240795 108240873 -91389277 - MIR SINE MIR -46 216 131 2012 173 18 18 chr5 108241193 108241581 -91388569 - MLT1B LTR MaLR 0 390 3 880 217 115 84 chr5 108241661 108242043 -91388107 + MSTD LTR MaLR 1 394 -2 2184 109 27 35 chr5 108242127 108242502 -91387648 + THE1C LTR MaLR 4 375 0 5446 217 34 28 chr5 108242742 108246494 -91383656 - L1PA16 LINE L1 0 6869 2928 750 169 0 29 chr5 108246494 108246630 -91383520 - FLAM_C SINE Alu 0 133 2 5446 217 34 28 chr5 108246630 108247899 -91382251 - L1PA16 LINE L1 -3941 2928 1668 2568 146 21 9 chr5 108247945 108247992 -91382158 - MER57B LTR ERV1 -10 424 379 207 0 0 0 chr5 108247992 108248015 -91382135 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2568 146 21 9 chr5 108248015 108248386 -91381764 - MER57B LTR ERV1 -55 379 1 320 220 20 30 chr5 108248397 108248497 -91381653 - L1PA16 LINE L1 -5320 1530 1432 3486 205 14 31 chr5 108249011 108249352 -91380798 - L1PA16 LINE L1 -6116 733 388 2177 112 0 0 chr5 108249352 108249656 -91380494 + AluSq SINE Alu 1 304 -9 3486 205 14 31 chr5 108249656 108250052 -91380098 - L1PA16 LINE L1 -6461 388 9 487 206 110 58 chr5 108250547 108250702 -91379448 - MIR SINE MIR -71 191 29 259 262 65 0 chr5 108250816 108250923 -91379227 - MER103 DNA DNA -22 144 31 21 36 0 0 chr5 108251517 108251545 -91378605 + AT_rich Low_complexity Low_complexity 1 28 0 256 289 54 80 chr5 108252529 108252586 -91377564 - MIR SINE MIR -31 231 174 246 32 0 0 chr5 108252586 108252617 -91377533 + (CA)n Simple_repeat Simple_repeat 1 31 0 256 289 54 80 chr5 108252617 108252691 -91377459 - MIR SINE MIR -88 174 100 2202 51 3 70 chr5 108252691 108253004 -91377146 + AluY SINE Alu 1 292 -19 256 289 54 80 chr5 108253004 108253108 -91377042 - MIR SINE MIR -162 100 4 6919 52 7 13 chr5 108253120 108254337 -91375813 + L1PA7 LINE L1 4924 6133 -21 1798 91 0 28 chr5 108254352 108254606 -91375544 - AluY SINE Alu -25 286 40 220 319 91 42 chr5 108254865 108255055 -91375095 + MIR SINE MIR 19 224 -38 2062 129 3 0 chr5 108255106 108255400 -91374750 - AluSx SINE Alu -17 295 1 222 347 74 50 chr5 108256279 108256400 -91373750 - MIR SINE MIR -138 124 1 399 299 72 60 chr5 108256597 108256915 -91373235 + HAL1 LINE L1 1 322 -2185 21 71 0 0 chr5 108257415 108257457 -91372693 + AT_rich Low_complexity Low_complexity 1 42 0 2160 116 0 25 chr5 108257537 108257857 -91372293 + AluSx SINE Alu 1 312 0 5777 102 53 0 chr5 108258089 108259123 -91371027 - L1PA15 LINE L1 -1 6164 5104 610 240 145 13 chr5 108259659 108259963 -91370187 + HAL1 LINE L1 2025 2368 -139 422 103 0 0 chr5 108260229 108260297 -91369853 - L1PA15 LINE L1 -3 6162 6095 23 0 0 0 chr5 108260329 108260352 -91369798 + AT_rich Low_complexity Low_complexity 1 23 0 283 345 109 0 chr5 108261519 108261638 -91368512 + L2 LINE L2 3179 3310 -3 295 203 0 76 chr5 108262788 108262867 -91367283 - MIR3 SINE MIR -132 76 4 207 100 0 0 chr5 108263551 108263581 -91366569 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 22 35 0 0 chr5 108263892 108263921 -91366229 + AT_rich Low_complexity Low_complexity 1 29 0 2318 100 7 0 chr5 108264932 108265241 -91364909 + AluSq SINE Alu 1 311 -2 203 171 0 0 chr5 108265273 108265314 -91364836 + A-rich Low_complexity Low_complexity 1 41 0 26 50 0 0 chr5 108265726 108265766 -91364384 + AT_rich Low_complexity Low_complexity 1 40 0 512 212 53 9 chr5 108265952 108266060 -91364090 + MER20 DNA MER1_type 1 113 -106 2168 227 63 39 chr5 108266060 108266699 -91363451 + MER76 LTR ERV 1 654 -34 402 281 0 0 chr5 108266704 108266793 -91363357 + MER20 DNA MER1_type 120 208 -11 302 281 27 19 chr5 108267122 108267239 -91362911 + MLT1L LTR MaLR 459 602 -13 303 284 85 39 chr5 108267303 108267666 -91362484 + L1M4 LINE L1 2142 2521 -3625 5508 35 39 4 chr5 108267768 108268460 -91361690 + L1PA6 LINE L1 5436 6151 -3 981 190 0 0 chr5 108268711 108268869 -91361281 + FRAM SINE Alu 1 157 -19 22 0 0 0 chr5 108269992 108270014 -91360136 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr5 108271009 108271051 -91359099 + AT_rich Low_complexity Low_complexity 1 42 0 538 307 43 31 chr5 108272015 108272269 -91357881 + L2 LINE L2 2152 2408 -906 1711 184 0 7 chr5 108272383 108272706 -91357444 + AluJb SINE Alu 1 321 0 1920 236 123 47 chr5 108272768 108273621 -91356529 + L1ME LINE L1 161 1078 -5127 2112 283 41 19 chr5 108273690 108274591 -91355559 + L1ME LINE L1 1387 2307 -4089 1588 218 112 85 chr5 108274615 108275443 -91354707 + L1ME LINE L1 2401 3266 -2949 2380 84 0 7 chr5 108275443 108275751 -91354399 + AluSx SINE Alu 1 306 -6 1588 218 112 85 chr5 108275751 108276007 -91354143 + L1ME LINE L1 3266 3514 -2701 691 172 61 71 chr5 108276042 108276240 -91353910 + L1ME LINE L1 3614 3809 -2406 249 292 56 42 chr5 108276287 108276431 -91353719 + L2 LINE L2 1970 2115 -1199 260 288 62 12 chr5 108276513 108276593 -91353557 + L1ME LINE L1 3850 3933 -2282 521 279 98 11 chr5 108276647 108276830 -91353320 + MIR SINE MIR 20 218 -44 731 254 86 17 chr5 108277233 108277465 -91352685 - MIR SINE MIR 0 262 15 710 188 0 43 chr5 108277844 108277982 -91352168 - FLAM_A SINE Alu -1 132 1 233 201 21 28 chr5 108278770 108278836 -91351314 - AluJ/monomer SINE Alu -263 36 1 1337 176 59 0 chr5 108278914 108279153 -91350997 + AluJo SINE Alu 48 300 -12 198 296 23 0 chr5 108280139 108280183 -91349967 + MIR SINE MIR 40 84 -124 414 185 148 30 chr5 108281683 108281818 -91348332 + MER103 DNA DNA 13 163 -3 198 0 0 0 chr5 108283701 108283723 -91346427 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 24 85 0 0 chr5 108284476 108284535 -91345615 + AT_rich Low_complexity Low_complexity 1 59 0 22 56 0 0 chr5 108285607 108285643 -91344507 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 108285878 108285899 -91344251 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 108289615 108289636 -91340514 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr5 108290107 108290144 -91340006 + (A)n Simple_repeat Simple_repeat 1 37 0 2098 97 0 14 chr5 108291725 108292035 -91338115 - AluSx SINE Alu 0 306 1 21 0 0 0 chr5 108292313 108292334 -91337816 + AT_rich Low_complexity Low_complexity 1 21 0 2296 84 7 3 chr5 108292455 108292753 -91337397 - AluY SINE Alu -12 299 1 30 59 0 0 chr5 108292977 108293028 -91337122 + AT_rich Low_complexity Low_complexity 1 51 0 340 323 108 0 chr5 108293776 108293906 -91336244 - L2 LINE L2 0 3272 3129 331 268 54 10 chr5 108293918 108294078 -91336072 + L1ME3A LINE L1 5742 5906 -256 234 224 204 79 chr5 108294075 108294227 -91335923 + L1M4 LINE L1 3949 4119 -2027 * 354 269 11 115 chr5 108294234 108294494 -91335656 + L1M4 LINE L1 4213 4445 -1701 305 104 0 0 chr5 108294501 108294549 -91335601 + MADE1 DNA Mariner 6 53 -27 894 284 35 9 chr5 108294562 108294910 -91335240 + L1M4 LINE L1 4478 4834 -1312 1333 153 31 9 chr5 108295866 108296095 -91334055 + MER46A DNA MER2_type 2 235 -1 251 241 0 0 chr5 108296459 108296517 -91333633 - MIR3 SINE MIR -1 207 150 414 310 230 0 chr5 108297536 108297710 -91332440 + L2 LINE L2 2565 2778 -536 1114 84 0 19 chr5 108298041 108298196 -91331954 + AluSg/x SINE Alu 150 301 -11 373 273 20 0 chr5 108298204 108298303 -91331847 + Charlie8 DNA MER1_type 106 206 -2211 218 280 147 0 chr5 108298309 108298384 -91331766 - MIR SINE MIR -93 115 30 316 264 221 0 chr5 108298657 108298797 -91331353 + MER5B DNA MER1_type 3 173 -5 2586 225 62 46 chr5 108299184 108300033 -91330117 - L1ME3 LINE L1 -4 6158 5296 1230 216 31 3 chr5 108300052 108300339 -91329811 - L1MB8 LINE L1 -26 6152 5858 3163 45 10 0 chr5 108301783 108302183 -91327967 - L1P LINE L1 -1194 4952 4549 6603 48 3 16 chr5 108302183 108303074 -91327076 + L1P LINE L1 3450 4329 -1817 2091 205 65 33 chr5 108303185 108303810 -91326340 - L1ME1 LINE L1 -328 5838 5194 365 60 0 0 chr5 108303810 108303860 -91326290 - L1PA6 LINE L1 0 6154 6105 1495 156 22 0 chr5 108303861 108304136 -91326014 - L1P3 LINE L1 -568 5586 5306 1919 139 7 3 chr5 108304729 108305017 -91325133 + AluSx SINE Alu 1 289 -23 1484 194 89 24 chr5 108305163 108305535 -91324615 + L1MA9 LINE L1 5878 6273 -39 21 71 0 0 chr5 108305645 108305687 -91324463 + AT_rich Low_complexity Low_complexity 1 42 0 1992 260 105 33 chr5 108305992 108306807 -91323343 - HAL1 LINE L1 -713 1794 910 1597 125 31 21 chr5 108306807 108307095 -91323055 - L1MD2 LINE L1 -2 6357 6067 1992 260 105 33 chr5 108307095 108307152 -91322998 - HAL1 LINE L1 -1597 910 859 230 198 33 77 chr5 108307282 108307373 -91322777 - HAL1 LINE L1 -2082 425 339 696 328 169 10 chr5 108307558 108308049 -91322101 + L2 LINE L2 2286 2854 -460 1287 108 6 0 chr5 108308081 108308257 -91321893 - AluSq SINE Alu -136 177 1 341 343 67 11 chr5 108308341 108308519 -91321631 + L2 LINE L2 3126 3313 0 574 261 62 58 chr5 108309294 108309719 -91320431 - MLT1J LTR MaLR -17 494 1 1293 167 0 53 chr5 108309789 108310034 -91320116 - MER46A DNA MER2_type 0 236 5 1088 86 11 23 chr5 108310575 108310749 -91319401 - L1P3 LINE L1 -5866 595 424 560 219 126 73 chr5 108313360 108313717 -91316433 - HAL1 LINE L1 -155 2352 1977 3451 102 54 25 chr5 108313841 108314430 -91315720 + L1PA16 LINE L1 962 1567 -4894 * 6009 66 20 1 chr5 108314397 108315234 -91314916 + L1PA16 LINE L1 4789 5641 -820 10149 89 21 29 chr5 108315405 108316993 -91313157 - THE1B-int LTR MaLR -5 1575 1 1380 124 33 40 chr5 108316995 108317269 -91312881 - THE1B LTR MaLR -2 362 91 3742 134 50 76 chr5 108318970 108319830 -91310320 + L1PA16 LINE L1 5644 6481 0 185 260 169 0 chr5 108320491 108320568 -91309582 - MIR3 SINE MIR -11 197 108 1679 268 171 28 chr5 108321175 108322665 -91307485 - HAL1 LINE L1 -623 1884 155 1758 94 72 83 chr5 108322681 108323042 -91307108 - THE1B LTR MaLR 0 364 8 1691 228 96 110 chr5 108323187 108323282 -91306868 + MLT-int LTR MaLR 332 427 -1308 2298 94 10 3 chr5 108323282 108323581 -91306569 - AluSx SINE Alu -11 301 1 1691 228 96 110 chr5 108323581 108324269 -91305881 + MLT-int LTR MaLR 427 1104 -631 410 0 20 0 chr5 108324485 108324535 -91305615 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 322 297 137 6 chr5 108325561 108325743 -91304407 - MIR SINE MIR -45 217 12 1944 193 60 28 chr5 108326158 108326625 -91303525 - MER82 DNA MER2_type -170 483 2 936 55 78 0 chr5 108327551 108327679 -91302471 + MER85 DNA T2_type 1 138 -1 4560 198 30 48 chr5 108328723 108330528 -91299622 - L1MB7 LINE L1 -352 5832 4060 225 253 123 65 chr5 108331082 108331236 -91298914 - L2 LINE L2 -122 3191 3029 491 363 26 18 chr5 108331525 108331751 -91298399 - MIR SINE MIR 0 262 35 406 256 136 23 chr5 108333878 108333927 -91296223 - L1MEc LINE L1 -4848 1462 1420 919 260 0 13 chr5 108333927 108334154 -91295996 + MER58A DNA MER1_type 1 224 0 406 256 136 23 chr5 108334154 108334280 -91295870 - L1MEc LINE L1 -4890 1420 1267 384 236 90 17 chr5 108334285 108334463 -91295687 - L1MEc LINE L1 -4926 1193 1003 * 755 153 91 55 chr5 108334455 108334730 -91295420 - L1 LINE L1 -2656 3490 3206 927 339 24 73 chr5 108335152 108335982 -91294168 - L2 LINE L2 -508 2806 2018 22 0 0 0 chr5 108336118 108336140 -91294010 + AT_rich Low_complexity Low_complexity 1 22 0 1699 164 0 43 chr5 108336141 108336440 -91293710 + AluJb SINE Alu 1 286 -26 1131 229 143 28 chr5 108336546 108336904 -91293246 + MLT1H1 LTR MaLR 1 399 -156 21 0 0 0 chr5 108337302 108337323 -91292827 + AT_rich Low_complexity Low_complexity 1 21 0 1257 181 77 0 chr5 108339924 108340223 -91289927 + MER33 DNA MER1_type 3 324 0 22 0 0 0 chr5 108343122 108343144 -91287006 + AT_rich Low_complexity Low_complexity 1 22 0 216 304 0 29 chr5 108343151 108343220 -91286930 - MIR SINE MIR 0 262 196 210 309 15 0 chr5 108343220 108343288 -91286862 + (CATA)n Simple_repeat Simple_repeat 2 70 0 395 242 8 65 chr5 108343294 108343418 -91286732 - MIR SINE MIR -89 173 57 198 143 0 0 chr5 108344452 108344487 -91285663 + (CA)n Simple_repeat Simple_repeat 1 35 0 1143 197 87 27 chr5 108345140 108345440 -91284710 + MLT1A1 LTR MaLR 36 353 -12 208 210 32 0 chr5 108345473 108345535 -91284615 + (TA)n Simple_repeat Simple_repeat 2 65 0 923 203 40 0 chr5 108345856 108346033 -91284117 - MER5A DNA MER1_type -5 184 1 833 279 117 26 chr5 108346183 108346610 -91283540 + MLT1K LTR MaLR 12 477 -111 374 307 24 48 chr5 108347023 108347189 -91282961 + L2 LINE L2 2784 2944 -369 2338 91 0 14 chr5 108350420 108350717 -91279433 + AluSq SINE Alu 1 293 -20 306 231 0 0 chr5 108350736 108350801 -91279349 - L1MC4 LINE L1 -1339 6703 6639 272 336 160 34 chr5 108350806 108351414 -91278736 - L2 LINE L2 0 3272 2586 340 326 192 15 chr5 108351644 108351905 -91278245 + L2 LINE L2 86 392 -2922 259 312 26 0 chr5 108353717 108353794 -91276356 - MIR SINE MIR -70 138 60 524 208 0 9 chr5 108353831 108353937 -91276213 + LTR40a LTR ERVL 377 481 -38 22 0 0 0 chr5 108354041 108354063 -91276087 + AT_rich Low_complexity Low_complexity 1 22 0 582 214 63 0 chr5 108354350 108354476 -91275674 - MER94 DNA DNA 0 134 1 946 46 76 15 chr5 108354885 108355016 -91275134 - MER85 DNA T2_type 0 139 1 514 278 85 32 chr5 108355611 108355859 -91274291 - MIR SINE MIR 0 262 2 220 296 188 59 chr5 108355859 108356218 -91273932 + L2 LINE L2 2294 2702 -612 185 372 12 0 chr5 108356338 108356424 -91273726 - L2 LINE L2 -681 2633 2547 243 81 0 0 chr5 108356502 108356539 -91273611 + L1ME3 LINE L1 6109 6145 -17 310 235 43 17 chr5 108356662 108356777 -91273373 + L1MC4 LINE L1 7924 8041 -1 272 316 151 56 chr5 108357331 108357585 -91272565 - L2 LINE L2 -1006 2308 2080 615 51 0 0 chr5 108357585 108357664 -91272486 + (GA)n Simple_repeat Simple_repeat 2 80 0 272 316 151 56 chr5 108357664 108358357 -91271793 - L2 LINE L2 -1234 2080 1271 187 237 186 42 chr5 108359513 108359631 -91270519 - L2 LINE L2 -6 3307 3173 430 178 89 52 chr5 108360789 108360924 -91269226 + MLT1B LTR MaLR 1 140 -250 354 71 18 18 chr5 108361022 108361078 -91269072 + MLT1B LTR MaLR 319 374 0 293 329 12 0 chr5 108361183 108361268 -91268882 + MIR3 SINE MIR 117 202 -6 284 340 14 49 chr5 108361297 108361441 -91268709 - MIR3 SINE MIR -10 198 60 1042 147 10 106 chr5 108362076 108362368 -91267782 - AluSx SINE Alu -1 311 48 3315 113 42 96 chr5 108363560 108364209 -91265941 - LTR18B LTR ERVL 0 614 1 3472 246 70 29 chr5 108364301 108364456 -91265694 - L1M4c LINE L1 -4572 2387 2240 1984 169 16 8 chr5 108364456 108364828 -91265322 + THE1C LTR MaLR 1 375 0 3472 246 70 29 chr5 108364828 108366816 -91263334 - L1M4c LINE L1 -4719 2240 162 261 0 0 0 chr5 108366818 108366847 -91263303 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 342 115 0 0 chr5 108366846 108366898 -91263252 + (TA)n Simple_repeat Simple_repeat 1 52 0 455 330 11 6 chr5 108366936 108367112 -91263038 + (TAA)n Simple_repeat Simple_repeat 3 179 0 378 107 0 0 chr5 108367135 108367191 -91262959 + (TA)n Simple_repeat Simple_repeat 2 57 0 572 203 70 0 chr5 108367194 108367322 -91262828 - L1M4c LINE L1 -6712 147 11 271 376 94 0 chr5 108368006 108368176 -91261974 - L2 LINE L2 0 3272 3087 206 118 0 0 chr5 108368285 108368319 -91261831 + (T)n Simple_repeat Simple_repeat 1 34 0 413 332 11 47 chr5 108369541 108369731 -91260419 + MER5A DNA MER1_type 1 183 -6 290 272 110 35 chr5 108369799 108369976 -91260174 - MIR3 SINE MIR -67 141 6 265 315 99 72 chr5 108370577 108370758 -91259392 - MIR SINE MIR -54 208 23 507 274 149 27 chr5 108370853 108371181 -91258969 - MLT1J2 LTR MaLR -16 434 67 26 0 0 0 chr5 108371234 108371260 -91258890 + AT_rich Low_complexity Low_complexity 1 26 0 379 283 61 40 chr5 108371282 108371480 -91258670 + MIR SINE MIR 59 260 -2 1483 189 76 40 chr5 108371481 108371878 -91258272 - MLT2D LTR ERVL -3 411 1 2616 69 6 3 chr5 108372961 108373310 -91256840 - L1PA7 LINE L1 0 6154 5805 734 200 68 5 chr5 108373318 108373523 -91256627 + MER63 DNA MER1_type 767 984 -78 683 167 48 0 chr5 108374062 108374188 -91255962 + L1PA15 LINE L1 6022 6153 -12 337 304 91 36 chr5 108374362 108374892 -91255258 - L1MEc LINE L1 -4576 1734 1176 302 271 34 59 chr5 108374898 108375016 -91255134 - L1MEc LINE L1 -5022 1097 983 334 360 7 7 chr5 108375305 108375452 -91254698 - L1MEc LINE L1 -5449 670 524 14822 113 24 17 chr5 108375655 108378530 -91251620 + L1P3 LINE L1 724 3618 -2843 1828 134 0 25 chr5 108378530 108378806 -91251344 + AluSg SINE Alu 1 269 -41 230 211 35 0 chr5 108379138 108379195 -91250955 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 182 114 0 29 chr5 108379282 108379317 -91250833 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 1271 207 47 13 chr5 108381930 108382230 -91247920 + MLT1E2 LTR MaLR 2 311 -315 250 250 0 0 chr5 108382232 108382296 -91247854 + LTR16B LTR ERVL 305 368 -96 1245 214 80 0 chr5 108382311 108382587 -91247563 + MLT1E2 LTR MaLR 322 619 -7 924 292 120 15 chr5 108382809 108383200 -91246950 + LTR16A LTR ERVL 9 440 -10 530 313 34 34 chr5 108383346 108383643 -91246507 + L1MEd LINE L1 499 795 -5735 350 258 161 16 chr5 108383951 108384137 -91246013 + L1MEd LINE L1 1206 1418 -5122 242 204 0 148 chr5 108384159 108384247 -91245903 + LTR16B LTR ERVL 1 75 -389 999 264 68 0 chr5 108384285 108384577 -91245573 + LTR16B LTR ERVL 153 464 0 1891 167 0 23 chr5 108385078 108385384 -91244766 + AluSx SINE Alu 1 299 -13 356 302 107 31 chr5 108385384 108386123 -91244027 + L1MEd LINE L1 2719 3513 -3027 269 313 54 27 chr5 108386124 108386236 -91243914 - L2 LINE L2 -196 3117 3003 526 258 47 56 chr5 108386909 108387142 -91243008 + L2 LINE L2 3082 3312 -1 359 299 37 30 chr5 108388194 108388328 -91241822 + L2 LINE L2 3179 3313 0 2325 240 78 16 chr5 108388377 108389060 -91241090 - MER21B LTR ERV1 -1 862 138 436 157 20 88 chr5 108389150 108389252 -91240898 - MER21B LTR ERV1 -757 106 12 579 327 99 14 chr5 108389380 108389744 -91240406 + LTR16C LTR ERVL 88 482 -9 2862 142 12 88 chr5 108390193 108390793 -91239357 - MLT2B3 LTR ERVL 0 554 1 21 0 0 0 chr5 108394119 108394140 -91236010 + AT_rich Low_complexity Low_complexity 1 21 0 410 255 119 12 chr5 108396459 108396702 -91233448 - HAL1 LINE L1 -175 2332 2064 445 283 88 54 chr5 108396710 108396950 -91233200 - HAL1 LINE L1 -413 2094 1847 290 237 11 43 chr5 108396958 108397051 -91233099 - HAL1 LINE L1 -733 1774 1685 294 234 47 28 chr5 108397417 108397524 -91232626 - HAL1 LINE L1 -821 1686 1578 369 248 144 80 chr5 108397528 108397608 -91232542 - HAL1 LINE L1 -999 1508 1435 1780 125 9 72 chr5 108397608 108397928 -91232222 - AluSx SINE Alu -12 300 1 369 248 144 80 chr5 108397928 108398423 -91231727 - HAL1 LINE L1 -1072 1435 896 1537 199 81 66 chr5 108399218 108399715 -91230435 - MLT1D LTR MaLR 0 505 2 319 256 124 16 chr5 108399718 108399847 -91230303 + L1MC3 LINE L1 6588 6730 -1055 309 238 25 0 chr5 108399909 108399989 -91230161 - LTR16A LTR ERVL -275 175 94 1408 193 11 0 chr5 108400001 108400275 -91229875 + L1MC4 LINE L1 6798 7074 -968 1530 221 141 13 chr5 108400294 108400841 -91229309 + L1MC4 LINE L1 7261 7877 -165 18499 78 5 2 chr5 108400965 108404429 -91225721 + L1PA7 LINE L1 2714 6142 -12 513 250 86 0 chr5 108404484 108404624 -91225526 - L2 LINE L2 -2098 1216 1065 453 81 0 0 chr5 108404798 108404860 -91225290 + (TG)n Simple_repeat Simple_repeat 1 62 0 235 235 12 35 chr5 108405081 108405166 -91224984 - L1MEd LINE L1 -6015 104 22 342 385 133 22 chr5 108405188 108405833 -91224317 - L2 LINE L2 -2128 1186 470 438 300 59 37 chr5 108406208 108406481 -91223669 + L1MEd LINE L1 650 928 -5191 2288 85 16 13 chr5 108406493 108406799 -91223351 + AluY SINE Alu 1 307 -4 1791 143 0 31 chr5 108407652 108407938 -91222212 - AluJb SINE Alu -15 297 21 206 342 139 0 chr5 108408198 108408277 -91221873 - MIR SINE MIR -114 148 59 402 57 0 0 chr5 108409260 108409313 -91220837 + (CA)n Simple_repeat Simple_repeat 2 54 0 243 0 0 0 chr5 108410181 108410208 -91219942 + (A)n Simple_repeat Simple_repeat 1 27 0 540 290 141 16 chr5 108410409 108410664 -91219486 - L2 LINE L2 -17 3296 3010 274 287 133 9 chr5 108410883 108411056 -91219094 + MIR SINE MIR 51 252 -10 482 234 114 29 chr5 108411120 108411295 -91218855 - MIR SINE MIR -66 196 7 1405 210 31 10 chr5 108411996 108412286 -91217864 + AluJo SINE Alu 1 296 -16 465 237 0 0 chr5 108412295 108412388 -91217762 - L2 LINE L2 0 3313 3221 287 113 19 0 chr5 108413259 108413312 -91216838 + GA-rich Low_complexity Low_complexity 2 55 0 382 185 74 0 chr5 108414877 108414958 -91215192 + Charlie1 DNA MER1_type 2675 2761 0 216 318 19 76 chr5 108414980 108415191 -91214959 - L2 LINE L2 -1914 1400 1202 3016 111 28 6 chr5 108415266 108415770 -91214380 + L1P4 LINE L1 5287 5801 -364 492 232 191 6 chr5 108416376 108416544 -91213606 + MIR SINE MIR 63 261 -1 253 254 17 0 chr5 108416550 108416609 -91213541 + MIR SINE MIR 82 141 -67 27 0 0 0 chr5 108417190 108417217 -91212933 + AT_rich Low_complexity Low_complexity 1 27 0 524 151 32 0 chr5 108418133 108418226 -91211924 - MLT1F1 LTR MaLR -4 563 468 * 686 216 105 0 chr5 108418223 108418376 -91211774 - MLT1F1 LTR MaLR -211 356 188 317 125 18 0 chr5 108418376 108418432 -91211718 + GA-rich Low_complexity Low_complexity 2 58 0 618 320 53 18 chr5 108418872 108419100 -91211050 + MIR SINE MIR 23 258 -4 1313 167 18 51 chr5 108419192 108419438 -91210712 + MER33 DNA MER1_type 1 228 -2357 2023 131 0 0 chr5 108419438 108419746 -91210404 - AluSx SINE Alu 0 308 1 1313 167 18 51 chr5 108419746 108419836 -91210314 + MER33 DNA MER1_type 228 319 -5 8152 88 19 1 chr5 108420139 108422110 -91208040 + L1PA5 LINE L1 4162 6154 0 872 248 86 14 chr5 108423072 108423350 -91206800 + LTR16A LTR ERVL 16 313 -137 639 222 7 0 chr5 108423418 108423553 -91206597 + LTR16A LTR ERVL 310 445 -5 461 281 85 53 chr5 108424038 108424380 -91205770 + L1MEd LINE L1 685 1037 -5082 351 286 256 30 chr5 108424630 108424833 -91205317 + L2 LINE L2 2645 2893 -421 2443 85 0 7 chr5 108425315 108425620 -91204530 + AluSp SINE Alu 1 303 -10 222 349 9 57 chr5 108426354 108426460 -91203690 - MER5A DNA MER1_type -1 188 88 2229 101 0 0 chr5 108427550 108427856 -91202294 + AluSc SINE Alu 1 306 -3 339 302 79 12 chr5 108428666 108428826 -91201324 - MIR SINE MIR -62 146 3 919 179 6 6 chr5 108430356 108430512 -91199638 - FRAM SINE Alu -23 153 1 311 279 196 21 chr5 108430837 108431110 -91199040 + L1ME LINE L1 5255 5390 -731 420 20 0 0 chr5 108431110 108431159 -91198991 + (TA)n Simple_repeat Simple_repeat 2 50 0 311 279 196 21 chr5 108431159 108431388 -91198762 + L1ME LINE L1 5390 5578 -543 303 224 118 0 chr5 108431762 108431847 -91198303 + L1ME4a LINE L1 6025 6119 -2 417 316 9 0 chr5 108431993 108432107 -91198043 + MIR SINE MIR 39 153 -55 5813 128 50 6 chr5 108432116 108434184 -91195966 + L1PBa LINE L1 8 2401 -4462 372 290 0 9 chr5 108434450 108434557 -91195593 + L2 LINE L2 3158 3263 -50 297 0 0 0 chr5 108434641 108434674 -91195476 + (TG)n Simple_repeat Simple_repeat 2 34 0 3284 147 59 36 chr5 108435043 108436154 -91193996 - L1MA9 LINE L1 -42 6270 5043 266 214 18 0 chr5 108436516 108436572 -91193578 + MER69 DNA AcHobo 1 57 -120 2653 52 34 1 chr5 108438221 108438765 -91191385 + L1P3 LINE L1 5024 5582 -572 294 205 0 0 chr5 108438774 108438857 -91191293 + T-rich Low_complexity Low_complexity 1 83 0 464 265 13 7 chr5 108440621 108440772 -91189378 - L1ME3 LINE L1 -13 6149 5998 2136 125 7 10 chr5 108440816 108440830 -91189320 - AluSq SINE Alu -17 296 283 270 0 0 0 chr5 108440830 108440860 -91189290 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 2136 125 7 10 chr5 108440860 108441142 -91189008 - AluSq SINE Alu -30 283 1 523 168 10 0 chr5 108441783 108441884 -91188266 + MLT1D LTR MaLR 399 500 -5 568 247 156 13 chr5 108441916 108442185 -91187965 + MLT1H LTR MaLR 1 275 -274 390 224 112 0 chr5 108442251 108442367 -91187783 + MLT1H LTR MaLR 421 549 0 609 230 62 83 chr5 108443493 108443832 -91186318 + MLT1D LTR MaLR 36 367 -138 306 238 12 0 chr5 108444471 108444551 -91185599 - MER103 DNA DNA 0 166 86 700 107 83 8 chr5 108444664 108444785 -91185365 + Ricksha DNA DNA 372 501 -2745 7274 150 58 12 chr5 108444787 108446145 -91184005 + Ricksha DNA DNA 1189 2608 -638 1989 150 10 65 chr5 108446608 108446994 -91183156 + MLT1A1 LTR MaLR 1 365 0 1602 145 40 47 chr5 108447141 108447438 -91182712 + AluJb SINE Alu 11 305 -7 21 57 0 0 chr5 108447780 108447815 -91182335 + AT_rich Low_complexity Low_complexity 1 35 0 198 336 41 8 chr5 108447975 108448097 -91182053 + L2 LINE L2 720 845 -2469 1991 126 58 30 chr5 108448495 108448860 -91181290 + THE1C LTR MaLR 1 375 0 318 253 0 0 chr5 108448921 108449020 -91181130 + GA-rich Low_complexity Low_complexity 2 100 0 452 261 42 34 chr5 108449500 108449619 -91180531 + MIR3 SINE MIR 40 159 -49 23 0 0 0 chr5 108450055 108450078 -91180072 + AT_rich Low_complexity Low_complexity 1 23 0 2087 124 0 0 chr5 108450815 108451137 -91179013 + AluSx SINE Alu 1 322 0 294 231 157 45 chr5 108451434 108451720 -91178430 + L1MC5 LINE L1 7561 7878 -83 1122 196 87 21 chr5 108451751 108452037 -91178113 + LTR52 LTR ERVL 1 305 -116 244 276 46 72 chr5 108452020 108452172 -91177978 + MER21B LTR ERV1 561 708 -155 * 639 240 20 98 chr5 108452566 108452812 -91177338 - L2 LINE L2 0 3313 3087 630 268 32 0 chr5 108452873 108453030 -91177120 + MER45A DNA AcHobo 17 178 0 196 315 42 28 chr5 108453031 108453174 -91176976 - L2 LINE L2 -300 2972 2828 2048 122 46 68 chr5 108453251 108453619 -91176531 - THE1B LTR MaLR -4 360 1 334 306 194 0 chr5 108454624 108454810 -91175340 - MIR SINE MIR -12 250 29 415 103 0 0 chr5 108455326 108455394 -91174756 - L1PA15 LINE L1 -3 6162 6095 23 0 0 0 chr5 108455426 108455449 -91174701 + AT_rich Low_complexity Low_complexity 1 23 0 193 172 0 103 chr5 108455572 108455630 -91174520 - L3b LINE CR1 -111 1472 1421 21 57 0 0 chr5 108456165 108456200 -91173950 + AT_rich Low_complexity Low_complexity 1 35 0 303 202 191 0 chr5 108456250 108456334 -91173816 + MLT1D LTR MaLR 1 100 -405 2237 32 46 11 chr5 108456926 108457206 -91172944 - AluY SINE Alu -13 298 9 1430 264 95 59 chr5 108457798 108458990 -91171160 - HAL1b LINE L1 0 1348 114 24 0 0 0 chr5 108459242 108459266 -91170884 + AT_rich Low_complexity Low_complexity 1 24 0 619 270 97 8 chr5 108459377 108459614 -91170536 - HAL1 LINE L1 -2225 282 25 23 0 0 0 chr5 108459624 108459647 -91170503 + AT_rich Low_complexity Low_complexity 1 23 0 250 87 43 0 chr5 108459777 108459823 -91170327 + (TCTG)n Simple_repeat Simple_repeat 1 48 0 1637 284 168 43 chr5 108461659 108462794 -91167356 + L2 LINE L2 1869 3150 -163 1978 101 20 0 chr5 108462794 108463090 -91167060 - LTR19A LTR ERV1 0 486 185 2137 97 0 14 chr5 108463090 108463400 -91166750 + AluSx SINE Alu 1 306 0 279 0 0 0 chr5 108464981 108465012 -91165138 + (T)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr5 108465483 108465504 -91164646 + AT_rich Low_complexity Low_complexity 1 21 0 248 242 210 73 chr5 108465855 108465979 -91164171 - MIR SINE MIR -17 245 105 220 276 0 0 chr5 108466527 108466585 -91163565 + (TTCA)n Simple_repeat Simple_repeat 3 60 0 537 276 241 0 chr5 108467315 108467518 -91162632 + MIR SINE MIR 1 252 -10 487 254 59 0 chr5 108467537 108467655 -91162495 - MIR SINE MIR -92 170 46 498 306 25 0 chr5 108468500 108468660 -91161490 + L2 LINE L2 2212 2375 -939 410 298 28 103 chr5 108468670 108468922 -91161228 + L2 LINE L2 2636 2868 -446 31 58 0 0 chr5 108469077 108469129 -91161021 + AT_rich Low_complexity Low_complexity 1 52 0 236 267 47 0 chr5 108469254 108469340 -91160810 - L1ME4a LINE L1 -187 5934 5845 890 270 68 29 chr5 108469464 108469920 -91160230 - L1ME4a LINE L1 -2081 5727 5254 2312 95 0 3 chr5 108470413 108470707 -91159443 - AluSq SINE Alu -20 293 1 313 304 126 77 chr5 108470923 108471209 -91158941 + MER102b DNA MER1_type 2 301 -40 295 296 9 61 chr5 108472912 108473027 -91157123 + MER5B DNA MER1_type 63 171 -7 205 344 38 45 chr5 108473735 108473892 -91156258 - MER5A DNA MER1_type -31 158 3 749 195 27 0 chr5 108474620 108474769 -91155381 - MER58B DNA MER1_type -16 325 173 412 266 29 36 chr5 108475425 108475564 -91154586 - L2 LINE L2 -2127 1187 1050 287 234 36 27 chr5 108475624 108475735 -91154415 + MLT1K LTR MaLR 354 465 -123 829 238 86 28 chr5 108476115 108476405 -91153745 - MLT1J2 LTR MaLR -143 307 1 262 314 20 39 chr5 108476518 108476620 -91153530 - MIR SINE MIR -117 145 46 342 196 14 105 chr5 108476644 108476682 -91153468 + MER113 DNA MER1_type? 1 41 -480 1831 184 105 16 chr5 108476682 108477111 -91153039 + MLT1C LTR MaLR 1 467 0 342 196 14 105 chr5 108477111 108477215 -91152935 + MER113 DNA MER1_type? 41 130 -391 5159 31 0 0 chr5 108477830 108478435 -91151715 + L1PA4 LINE L1 5546 6150 -5 11302 45 1 1 chr5 108479456 108480949 -91149201 + L1P LINE L1 1646 3138 -3008 384 326 44 0 chr5 108481629 108481764 -91148386 - MIR SINE MIR 0 262 122 362 314 29 35 chr5 108482935 108483107 -91147043 - L3 LINE CR1 -607 970 800 2338 57 3 7 chr5 108483470 108483768 -91146382 - AluY SINE Alu -14 297 1 1042 271 61 9 chr5 108483773 108484054 -91146096 + MSTD LTR MaLR 52 354 -42 2100 141 0 0 chr5 108484054 108484345 -91145805 - AluSx SINE Alu -21 291 1 1042 271 61 9 chr5 108484345 108484391 -91145759 + MSTD LTR MaLR 354 396 0 236 271 82 12 chr5 108484864 108484949 -91145201 + MIR SINE MIR 111 201 -61 2101 186 14 14 chr5 108485024 108485282 -91144868 - MLT1C LTR MaLR -32 435 175 431 49 33 0 chr5 108485282 108485343 -91144807 + (CATA)n Simple_repeat Simple_repeat 4 66 0 2101 186 14 14 chr5 108485343 108485519 -91144631 - MLT1C LTR MaLR -291 176 1 23 0 0 0 chr5 108485519 108485542 -91144608 + AT_rich Low_complexity Low_complexity 1 23 0 311 246 0 15 chr5 108485712 108485777 -91144373 - MIR SINE MIR -125 83 20 29 28 0 0 chr5 108487364 108487400 -91142750 + AT_rich Low_complexity Low_complexity 1 36 0 435 245 28 49 chr5 108487987 108488130 -91142020 - MER5A DNA MER1_type 0 189 50 736 292 138 30 chr5 108488368 108488775 -91141375 - MLT1L LTR MaLR -13 602 152 337 213 0 0 chr5 108489560 108489621 -91140529 - L2 LINE L2 -6 3307 3247 1856 128 16 40 chr5 108539636 108539937 -91090213 - L1 LINE L1 -1305 4841 4549 2100 144 3 0 chr5 108539937 108540235 -91089915 - AluSx SINE Alu -13 299 1 1856 128 16 40 chr5 108540235 108540308 -91089842 - L1 LINE L1 -1597 4549 4476 2534 108 59 0 chr5 108540352 108540761 -91089389 - L1MA3 LINE L1 -353 5952 5520 4955 166 15 16 chr5 108540863 108541956 -91088194 + L1 LINE L1 3400 4490 -1656 457 228 0 0 chr5 108541960 108542039 -91088111 + AluJ/FLAM SINE Alu 4 82 -230 8884 38 3 2 chr5 108542139 108543317 -91086833 + L1P LINE L1 2101 3280 -2866 22 0 0 0 chr5 108544277 108544299 -91085851 + AT_rich Low_complexity Low_complexity 1 22 0 216 304 0 29 chr5 108544306 108544375 -91085775 - MIR SINE MIR 0 262 196 226 294 15 0 chr5 108544375 108544443 -91085707 + (CATA)n Simple_repeat Simple_repeat 2 70 0 395 242 8 65 chr5 108544449 108544573 -91085577 - MIR SINE MIR -89 173 57 216 135 0 0 chr5 108545603 108545640 -91084510 + (CA)n Simple_repeat Simple_repeat 1 37 0 413 332 11 47 chr5 108546420 108546610 -91083540 + MER5A DNA MER1_type 1 183 -6 290 272 110 35 chr5 108546678 108546855 -91083295 - MIR3 SINE MIR -67 141 6 265 315 99 72 chr5 108547455 108547636 -91082514 - MIR SINE MIR -54 208 23 507 274 149 27 chr5 108547731 108548059 -91082091 - MLT1J2 LTR MaLR -16 434 67 26 0 0 0 chr5 108548112 108548138 -91082012 + AT_rich Low_complexity Low_complexity 1 26 0 379 283 61 40 chr5 108548160 108548358 -91081792 + MIR SINE MIR 59 260 -2 1483 189 76 40 chr5 108548359 108548756 -91081394 - MLT2D LTR ERVL -3 411 1 2616 69 6 3 chr5 108549838 108550187 -91079963 - L1PA7 LINE L1 0 6154 5805 734 200 68 5 chr5 108550195 108550400 -91079750 + MER63 DNA MER1_type 766 983 -78 1197 262 30 102 chr5 108550928 108551502 -91078648 - L2 LINE L2 0 3313 2784 833 279 117 26 chr5 108551915 108552342 -91077808 - MLT1K LTR MaLR -111 477 12 923 203 40 0 chr5 108552492 108552669 -91077481 + MER5A DNA MER1_type 1 184 -5 208 210 32 0 chr5 108552990 108553052 -91077098 + (TA)n Simple_repeat Simple_repeat 2 65 0 1210 189 86 44 chr5 108553085 108553424 -91076726 - MLT1A1 LTR MaLR -12 353 1 239 291 8 39 chr5 108553454 108553581 -91076569 - L1M4c LINE L1 -4240 2719 2597 2078 120 3 0 chr5 108553691 108553997 -91076153 - AluSx SINE Alu 0 307 1 3333 114 40 95 chr5 108554085 108554735 -91075415 - LTR18B LTR ERVL 0 614 1 4021 239 66 59 chr5 108554827 108554982 -91075168 - L1M4c LINE L1 -4572 2387 2234 2007 167 16 8 chr5 108554982 108555354 -91074796 + THE1C LTR MaLR 1 375 0 4021 239 66 59 chr5 108555354 108557344 -91072806 - L1M4c LINE L1 -4725 2234 258 297 0 0 0 chr5 108557344 108557377 -91072773 + (TC)n Simple_repeat Simple_repeat 2 34 0 * 1014 157 0 0 chr5 108557376 108557554 -91072596 + (TA)n Simple_repeat Simple_repeat 1 178 0 4021 239 66 59 chr5 108557377 108557774 -91072376 - L1M4c LINE L1 -6701 258 11 271 376 94 0 chr5 108558449 108558619 -91071531 - L2 LINE L2 0 3272 3087 206 118 0 0 chr5 108558728 108558762 -91071388 + (T)n Simple_repeat Simple_repeat 1 34 0 275 342 157 31 chr5 108559709 108560317 -91069833 + L2 LINE L2 2586 3272 0 306 231 0 0 chr5 108560322 108560387 -91069763 + L1MC4 LINE L1 6639 6703 -1339 2338 91 0 14 chr5 108560406 108560703 -91069447 - AluSq SINE Alu -20 293 1 355 274 90 16 chr5 108563736 108563791 -91066359 - L1MEc LINE L1 -967 1523 1473 919 260 0 13 chr5 108563791 108564018 -91066132 + MER58A DNA MER1_type 1 224 0 355 274 90 16 chr5 108564018 108564147 -91066003 - L1MEc LINE L1 -1017 1473 1267 384 236 90 17 chr5 108564149 108564327 -91065823 - L1MEc LINE L1 -4926 1193 1003 * 1192 171 87 6 chr5 108564319 108564663 -91065487 - L1 LINE L1 -2656 3490 3119 2296 85 16 13 chr5 108564663 108564970 -91065180 - AluY SINE Alu -3 308 1 438 300 59 37 chr5 108564982 108565255 -91064895 - L1MEc LINE L1 -5191 928 650 386 383 130 22 chr5 108565630 108566277 -91063873 + L2 LINE L2 470 1186 -2128 235 235 12 35 chr5 108566299 108566384 -91063766 + L1MEd LINE L1 22 104 -6015 453 81 0 0 chr5 108566605 108566667 -91063483 + (CA)n Simple_repeat Simple_repeat 1 62 0 513 250 86 0 chr5 108566841 108566981 -91063169 + L2 LINE L2 1065 1216 -2098 19307 99 14 20 chr5 108567036 108569920 -91060230 - L1PA7 LINE L1 -12 6457 3558 211 37 0 0 chr5 108569920 108569947 -91060203 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1995 136 0 14 chr5 108569947 108570233 -91059917 - AluSg SINE Alu -28 282 1 19307 99 14 20 chr5 108570233 108573108 -91057042 - L1PA7 LINE L1 -2909 3560 724 334 360 7 7 chr5 108573311 108573458 -91056692 + L1MEd LINE L1 524 670 -5449 302 271 34 59 chr5 108573747 108573865 -91056285 + L1MEd LINE L1 983 1097 -5022 337 304 91 36 chr5 108573871 108574401 -91055749 + L1MEd LINE L1 1176 1734 -4576 5251 120 24 1 chr5 108574575 108575423 -91054727 - L1PA15 LINE L1 -12 6153 5287 202 329 19 71 chr5 108575498 108575708 -91054442 + L2 LINE L2 1202 1400 -1914 382 185 74 0 chr5 108575730 108575811 -91054339 - Charlie1 DNA MER1_type 0 2761 2675 287 113 19 0 chr5 108577382 108577435 -91052715 + CT-rich Low_complexity Low_complexity 2 55 0 465 237 0 0 chr5 108578306 108578399 -91051751 + L2 LINE L2 3221 3313 0 1405 210 31 10 chr5 108578408 108578698 -91051452 - AluJo SINE Alu -16 296 1 482 234 114 29 chr5 108579399 108579574 -91050576 + MIR SINE MIR 7 196 -66 274 287 133 9 chr5 108579638 108579811 -91050339 - MIR SINE MIR -10 252 51 540 290 141 16 chr5 108580030 108580285 -91049865 + L2 LINE L2 3010 3296 -17 234 0 0 0 chr5 108580486 108580512 -91049638 + (T)n Simple_repeat Simple_repeat 1 26 0 420 55 0 0 chr5 108581380 108581435 -91048715 + (TG)n Simple_repeat Simple_repeat 2 56 0 206 342 139 0 chr5 108582418 108582497 -91047653 + MIR SINE MIR 59 148 -114 1791 143 0 31 chr5 108582757 108583043 -91047107 + AluJb SINE Alu 21 297 -15 2862 142 12 88 chr5 108586847 108587447 -91042703 + MLT2B3 LTR ERVL 1 554 0 579 327 99 14 chr5 108587896 108588260 -91041890 - LTR16C LTR ERVL -9 482 88 436 157 20 88 chr5 108588388 108588490 -91041660 + MER21B LTR ERV1 12 106 -757 2325 240 78 16 chr5 108588580 108589263 -91040887 + MER21B LTR ERV1 138 862 -1 359 299 37 30 chr5 108589312 108589446 -91040704 - L2 LINE L2 0 3313 3179 526 258 47 56 chr5 108590498 108590731 -91039419 - L2 LINE L2 -1 3312 3082 269 313 54 27 chr5 108591404 108591516 -91038634 + L2 LINE L2 3003 3117 -196 345 303 107 31 chr5 108591517 108592256 -91037894 - L1MDa LINE L1 -3027 3513 2719 1891 167 0 23 chr5 108592256 108592562 -91037588 - AluSx SINE Alu -13 299 1 1026 266 65 0 chr5 108593063 108593356 -91036794 - LTR16B LTR ERVL 0 464 153 242 204 0 148 chr5 108593394 108593482 -91036668 - LTR16B LTR ERVL -389 75 1 350 258 161 16 chr5 108593504 108593690 -91036460 - L1MDa LINE L1 -5122 1418 1206 530 313 34 34 chr5 108593998 108594295 -91035855 - L1MDa LINE L1 -5735 795 499 924 292 120 15 chr5 108594440 108594831 -91035319 - LTR16A LTR ERVL -10 440 9 1245 214 80 0 chr5 108595053 108595329 -91034821 - MLT1E2 LTR MaLR -7 619 322 266 234 0 0 chr5 108595344 108595408 -91034742 - LTR16B LTR ERVL -96 368 305 1271 207 47 13 chr5 108595410 108595710 -91034440 - MLT1E2 LTR MaLR -315 311 2 182 114 0 29 chr5 108598321 108598356 -91031794 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 230 211 35 0 chr5 108598443 108598500 -91031650 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 21 0 0 0 chr5 108598846 108598867 -91031283 + AT_rich Low_complexity Low_complexity 1 21 0 410 255 119 12 chr5 108601184 108601427 -91028723 - HAL1 LINE L1 -175 2332 2064 445 283 88 54 chr5 108601435 108601675 -91028475 - HAL1 LINE L1 -413 2094 1847 290 237 11 43 chr5 108601683 108601776 -91028374 - HAL1 LINE L1 -733 1774 1685 294 234 47 28 chr5 108602142 108602249 -91027901 - HAL1 LINE L1 -821 1686 1578 375 249 144 78 chr5 108602253 108602333 -91027817 - HAL1 LINE L1 -999 1508 1435 2152 116 0 3 chr5 108602333 108602634 -91027516 - AluSx SINE Alu -12 300 1 375 249 144 78 chr5 108602634 108603128 -91027022 - HAL1 LINE L1 -1072 1435 896 1771 198 87 47 chr5 108603868 108604353 -91025797 - MLT1D LTR MaLR 0 505 2 319 323 31 0 chr5 108604355 108604485 -91025665 + L1MD3 LINE L1 6619 6752 -1243 309 238 25 0 chr5 108604547 108604627 -91025523 - LTR16A LTR ERVL -275 175 94 1408 193 11 0 chr5 108604639 108604913 -91025237 + L1MC4 LINE L1 6798 7074 -968 1683 226 149 2 chr5 108604932 108605490 -91024660 + L1MC4 LINE L1 7261 7900 -142 276 250 36 36 chr5 108605799 108605883 -91024267 + L2 LINE L2 3226 3309 -4 328 303 91 8 chr5 108606337 108606469 -91023681 - MIR SINE MIR 0 262 120 1257 181 77 0 chr5 108607259 108607558 -91022592 - MER33 DNA MER1_type 0 324 3 391 332 183 11 chr5 108609689 108609951 -91020199 + L2 LINE L2 86 392 -2922 259 312 26 0 chr5 108611761 108611838 -91018312 - MIR SINE MIR -70 138 60 524 208 0 9 chr5 108611875 108611981 -91018169 + LTR40a LTR ERVL 377 481 -38 22 0 0 0 chr5 108612085 108612107 -91018043 + AT_rich Low_complexity Low_complexity 1 22 0 582 214 63 0 chr5 108612394 108612520 -91017630 - MER94 DNA DNA 0 134 1 837 65 122 0 chr5 108612929 108613052 -91017098 - MER85 DNA T2_type 0 139 2 216 378 82 0 chr5 108613390 108613488 -91016662 - L2 LINE L2 -5 3267 3162 665 292 41 0 chr5 108614587 108614782 -91015368 - MIR SINE MIR -35 227 25 2214 121 0 10 chr5 108615240 108615545 -91014605 - AluSg SINE Alu -8 302 1 283 291 137 44 chr5 108616349 108616531 -91013619 + MIR3 SINE MIR 7 205 -3 2255 101 0 0 chr5 108616950 108617238 -91012912 + AluY SINE Alu 1 288 -23 21 0 0 0 chr5 108617989 108618010 -91012140 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 108619373 108619395 -91010755 + AT_rich Low_complexity Low_complexity 1 22 0 447 293 41 24 chr5 108619915 108620038 -91010112 - MIR3 SINE MIR -50 158 34 918 147 6 0 chr5 108621156 108621312 -91008838 - L1MB7 LINE L1 -8 6176 6020 2459 145 9 2 chr5 108621313 108621733 -91008417 + MER52C LTR ERV1 1 423 -855 1456 166 41 3 chr5 108621735 108622025 -91008125 - L1MB7 LINE L1 -249 5929 5629 711 226 0 0 chr5 108622105 108622238 -91007912 - FLAM_A SINE Alu 0 133 1 21 36 0 0 chr5 108623247 108623275 -91006875 + AT_rich Low_complexity Low_complexity 1 28 0 439 323 78 17 chr5 108624193 108624425 -91005725 + MIR SINE MIR 7 252 -10 948 180 26 5 chr5 108625108 108625297 -91004853 + L1M2 LINE L1 2 194 -6655 2737 214 46 31 chr5 108625301 108627725 -91002425 - L1 LINE L1 -3017 3831 1258 803 286 14 9 chr5 108628586 108628799 -91001351 + MIR SINE MIR 37 250 -12 26 0 0 0 chr5 108629658 108629684 -91000466 + AT_rich Low_complexity Low_complexity 1 26 0 203 202 34 22 chr5 108629700 108629789 -91000361 + (TATAA)n Simple_repeat Simple_repeat 5 94 0 460 233 41 41 chr5 108629813 108629959 -91000191 - MIR SINE MIR -46 216 71 628 128 10 10 chr5 108630007 108630109 -91000041 + MSTB1 LTR MaLR 1 102 -330 276 186 0 17 chr5 108630112 108630171 -90999979 + MLT-int LTR MaLR 1678 1735 0 2180 152 54 0 chr5 108630171 108630540 -90999610 + MSTB1 LTR MaLR 1 389 -43 434 284 107 25 chr5 108630675 108630872 -90999278 + MIR SINE MIR 16 228 -34 243 329 101 38 chr5 108633747 108633984 -90996166 + L2 LINE L2 3058 3309 -4 1743 111 8 0 chr5 108635236 108635514 -90994636 - AluSg SINE Alu 0 323 44 480 247 60 7 chr5 108635644 108635794 -90994356 - MIR SINE MIR -1 261 104 2903 256 19 8 chr5 108635958 108636754 -90993396 - L1MB8 LINE L1 -33 6145 5341 239 288 0 27 chr5 108637028 108637101 -90993049 - Charlie4 DNA MER1_type -5 1956 1886 248 326 86 11 chr5 108637237 108637401 -90992749 - MIR SINE MIR -70 192 16 250 246 0 0 chr5 108639656 108639717 -90990433 + (TATG)n Simple_repeat Simple_repeat 1 61 0 559 237 179 48 chr5 108640549 108640756 -90989394 + MIR SINE MIR 29 262 0 222 252 261 9 chr5 108640913 108641028 -90989122 + MIR SINE MIR 109 252 -10 194 297 189 27 chr5 108641978 108642126 -90988024 + L2 LINE L2 2508 2679 -635 476 138 0 46 chr5 108642179 108642266 -90987884 + LTR41 LTR ERVL 20 102 -671 448 157 0 0 chr5 108642460 108642530 -90987620 + MLT2D LTR ERVL 18 87 -327 1291 148 40 0 chr5 108642635 108642885 -90987265 - L1MA4A LINE L1 0 6303 6044 879 136 6 71 chr5 108642885 108643054 -90987096 + MLT2D LTR ERVL 79 236 -178 365 135 0 0 chr5 108643122 108643174 -90986976 - MER8 DNA MER2_type 0 239 188 817 160 8 8 chr5 108643259 108643390 -90986760 - Tigger2 DNA MER2_type -11 2707 2577 234 170 0 21 chr5 108643387 108643434 -90986716 - Tigger2 DNA MER2_type -2258 460 415 * 353 138 0 0 chr5 108643433 108643491 -90986659 - Tigger2 DNA MER2_type -2659 59 2 428 213 0 12 chr5 108643492 108643572 -90986578 + Tigger2 DNA MER2_type 2623 2701 -17 495 48 0 0 chr5 108643591 108643653 -90986497 + (CA)n Simple_repeat Simple_repeat 2 63 0 361 277 181 36 chr5 108644210 108644376 -90985774 - MIR SINE MIR -33 229 40 22 0 0 0 chr5 108644476 108644498 -90985652 + AT_rich Low_complexity Low_complexity 1 22 0 4549 145 66 10 chr5 108644498 108645317 -90984833 - L1MB3 LINE L1 -10 6173 5309 835 132 63 0 chr5 108645329 108645488 -90984662 - L1MA8 LINE L1 -7 6284 6116 401 274 60 0 chr5 108646159 108646276 -90983874 - MIR SINE MIR -93 169 46 200 376 30 0 chr5 108646379 108646480 -90983670 - MIR SINE MIR -110 152 49 212 393 0 0 chr5 108647299 108647406 -90982744 - MIR SINE MIR 0 262 156 5617 76 15 17 chr5 108647601 108648408 -90981742 + L1MA2 LINE L1 5500 6304 0 258 291 0 0 chr5 108648796 108648851 -90981299 + C-rich Low_complexity Low_complexity 2 56 0 606 183 0 9 chr5 108648886 108649001 -90981149 - L1MD2 LINE L1 -17 6342 6229 379 286 216 5 chr5 108649099 108649332 -90980818 + MER45C DNA AcHobo 1 299 -654 643 247 142 46 chr5 108649366 108649585 -90980565 + MER45C DNA AcHobo 713 952 -1 313 315 206 26 chr5 108650032 108650343 -90979807 + L2 LINE L2 2911 3277 -36 301 343 44 28 chr5 108652403 108652584 -90977566 + L2 LINE L2 2506 2689 -625 994 200 79 9 chr5 108652588 108652803 -90977347 - MLT1D LTR MaLR 0 505 276 463 318 68 6 chr5 108652864 108653040 -90977110 + L2 LINE L2 3122 3308 -5 187 283 50 17 chr5 108653315 108653375 -90976775 - MIR SINE MIR -154 108 47 21 0 0 0 chr5 108653761 108653782 -90976368 + AT_rich Low_complexity Low_complexity 1 21 0 642 239 89 43 chr5 108654272 108654552 -90975598 + Charlie7 DNA MER1_type 64 356 -2256 1461 217 109 25 chr5 108654560 108654691 -90975459 + Charlie7 DNA MER1_type 1486 1605 -1007 189 0 0 0 chr5 108654691 108654712 -90975438 + (TAA)n Simple_repeat Simple_repeat 1 21 0 1461 217 109 25 chr5 108654712 108655595 -90974555 + Charlie7 DNA MER1_type 1605 2612 0 21 0 0 0 chr5 108657279 108657300 -90972850 + AT_rich Low_complexity Low_complexity 1 21 0 992 256 42 50 chr5 108657550 108657629 -90972521 - Charlie4a DNA MER1_type -1559 402 324 2205 102 0 30 chr5 108657629 108657934 -90972216 - AluSg SINE Alu -14 296 1 992 256 42 50 chr5 108657934 108658257 -90971893 - Charlie4a DNA MER1_type -1637 324 3 331 333 106 34 chr5 108658422 108658800 -90971350 + L2 LINE L2 2572 2976 -338 462 61 30 0 chr5 108659299 108659365 -90970785 - L1PA8A LINE L1 -68 6063 5996 425 158 0 0 chr5 108659365 108659438 -90970712 + L1PA8 LINE L1 6097 6172 0 299 301 55 32 chr5 108661552 108661705 -90968445 - MER5A DNA MER1_type -5 184 1 254 324 171 36 chr5 108662064 108662373 -90967777 + L2 LINE L2 2963 3313 0 329 227 0 0 chr5 108663597 108663672 -90966478 - MIR SINE MIR -28 234 160 653 309 90 20 chr5 108664087 108664433 -90965717 + L2 LINE L2 1961 2330 -984 183 281 26 104 chr5 108665263 108665455 -90964695 + L2 LINE L2 1579 1755 -1559 246 326 11 0 chr5 108665873 108665968 -90964182 + L1M4b LINE L1 2043 2138 -5329 283 244 39 32 chr5 108666216 108666360 -90963790 + L1M4b LINE L1 2820 3004 -4561 308 200 67 11 chr5 108666706 108666796 -90963354 + L1M4b LINE L1 3534 3628 -4118 677 300 107 61 chr5 108666805 108667265 -90962885 + L2 LINE L2 1745 2225 -1089 1924 181 17 15 chr5 108667498 108667870 -90962280 + MLT1A1 LTR MaLR 1 365 0 1006 310 61 37 chr5 108667875 108668363 -90961787 + L2 LINE L2 2489 3002 -270 531 281 157 22 chr5 108668456 108668641 -90961509 + LTR41 LTR ERVL 3 212 -583 303 240 167 55 chr5 108669062 108669299 -90960851 + LTR41 LTR ERVL 512 795 0 676 236 74 10 chr5 108669301 108669504 -90960646 + L2 LINE L2 3098 3313 0 2192 137 0 0 chr5 108669754 108670054 -90960096 + AluSx SINE Alu 1 300 -12 243 0 0 0 chr5 108670055 108670082 -90960068 + (CCA)n Simple_repeat Simple_repeat 3 29 0 265 213 93 13 chr5 108670397 108670472 -90959678 - Charlie8 DNA MER1_type -2331 86 6 195 184 0 0 chr5 108670573 108670611 -90959539 + (TA)n Simple_repeat Simple_repeat 2 39 0 1923 132 7 4 chr5 108670619 108670931 -90959219 - AluSx SINE Alu 0 313 1 227 316 57 68 chr5 108671103 108671280 -90958870 + MER5B DNA MER1_type 4 178 0 315 161 0 0 chr5 108671604 108671660 -90958490 + (TG)n Simple_repeat Simple_repeat 2 57 0 408 222 97 56 chr5 108671886 108671957 -90958193 - Charlie8 DNA MER1_type -182 159 92 2115 89 0 0 chr5 108671957 108672214 -90957936 + AluSx SINE Alu 26 282 -30 242 36 0 0 chr5 108672214 108672242 -90957908 + FLAM_C SINE Alu 26 310 0 408 222 97 56 chr5 108672242 108672313 -90957837 - Charlie8 DNA MER1_type -249 92 10 459 311 19 31 chr5 108672315 108672476 -90957674 + MER5B DNA MER1_type 20 178 0 430 305 20 50 chr5 108673234 108673434 -90956716 - MIR3 SINE MIR -13 195 2 298 275 208 0 chr5 108675073 108675193 -90954957 - MER5A DNA MER1_type -3 186 42 1983 80 0 4 chr5 108676096 108676346 -90953804 + AluSx SINE Alu 58 306 -6 943 143 6 16 chr5 108677692 108677874 -90952276 + CT-rich Low_complexity Low_complexity 1 180 0 228 135 0 0 chr5 108677886 108677923 -90952227 + (TCCC)n Simple_repeat Simple_repeat 1 37 0 308 337 109 58 chr5 108678061 108678438 -90951712 - L1ME LINE L1 -372 5792 5397 309 324 95 28 chr5 108678469 108678976 -90951174 - L1ME LINE L1 -1119 5027 4487 630 293 95 60 chr5 108679212 108680424 -90949726 - L1ME LINE L1 -2207 3939 2686 4346 196 33 2 chr5 108680525 108681412 -90948738 - L1MB1 LINE L1 -1 6167 5254 4992 185 19 0 chr5 108681429 108682402 -90947748 - L1MB1 LINE L1 -985 5161 4171 1445 304 91 9 chr5 108682398 108682957 -90947193 - L1M3d LINE L1 -5379 512 2 * 397 307 133 5 chr5 108683203 108683421 -90946729 - HAL1 LINE L1 -870 1637 1392 195 246 0 0 chr5 108685868 108685925 -90944225 + GA-rich Low_complexity Low_complexity 3 59 0 251 331 91 40 chr5 108686646 108686821 -90943329 + MIR SINE MIR 43 226 -36 227 281 42 31 chr5 108687053 108687149 -90943001 - L3b LINE CR1 -179 1404 1308 461 138 0 0 chr5 108687519 108687584 -90942566 - FLAM SINE Alu -20 123 59 1727 149 18 7 chr5 108687589 108687870 -90942280 + AluJb SINE Alu 21 304 -8 4445 176 28 11 chr5 108688441 108689333 -90940817 - L1MB7 LINE L1 0 6184 5278 22 35 0 0 chr5 108689812 108689841 -90940309 + AT_rich Low_complexity Low_complexity 1 29 0 249 341 11 0 chr5 108690785 108690873 -90939277 + GA-rich Low_complexity Low_complexity 1 89 0 342 278 57 72 chr5 108691380 108691643 -90938507 - L1MB7 LINE L1 -1473 4673 4415 790 325 70 24 chr5 108691724 108692139 -90938011 + LTR16B LTR ERVL 27 460 -4 283 310 64 18 chr5 108693297 108693468 -90936682 + MLT1L LTR MaLR 437 615 0 212 330 38 28 chr5 108693505 108693611 -90936539 + MIR SINE MIR 48 154 -108 7952 145 22 1 chr5 108693645 108694993 -90935157 + L1 LINE L1 3576 4951 -1195 308 297 77 45 chr5 108695137 108695292 -90934858 + L2 LINE L2 3110 3269 -3 1004 107 11 48 chr5 108695511 108695698 -90934452 - Tigger1 DNA MER2_type -76 2342 2163 191 309 99 12 chr5 108696048 108696129 -90934021 + L2 LINE L2 3183 3270 -2 1256 189 16 8 chr5 108696201 108696445 -90933705 + L1PB3 LINE L1 5906 6151 -3 30 0 0 0 chr5 108696445 108696475 -90933675 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr5 108699583 108699623 -90930527 + AT_rich Low_complexity Low_complexity 1 40 0 957 215 11 95 chr5 108700375 108700659 -90929491 + MIR SINE MIR 2 261 -1 255 133 0 0 chr5 108700695 108700740 -90929410 + (TC)n Simple_repeat Simple_repeat 2 46 0 657 270 46 10 chr5 108701503 108701699 -90928451 + MER63A DNA MER1_type 4 206 -4 1075 214 131 31 chr5 108702821 108703204 -90926946 + MER110A LTR ERV1 48 468 0 323 213 21 21 chr5 108703295 108703389 -90926761 - LTR33 LTR ERVL -18 503 410 699 317 64 21 chr5 108703427 108703755 -90926395 - LTR33 LTR ERVL -173 348 7 229 320 53 42 chr5 108704756 108705093 -90925057 + L1MEd LINE L1 895 1235 -4884 543 253 143 8 chr5 108705144 108705381 -90924769 + HAL1 LINE L1 1406 1674 -833 180 0 0 0 chr5 108707773 108707793 -90922357 + (CAA)n Simple_repeat Simple_repeat 2 21 0 31 0 0 0 chr5 108708063 108708094 -90922056 + AT_rich Low_complexity Low_complexity 1 31 0 1853 157 17 3 chr5 108708132 108708432 -90921718 + AluJo SINE Alu 1 304 -8 350 352 68 38 chr5 108709055 108709291 -90920859 - L3 LINE CR1 -12 1565 1323 1492 217 22 32 chr5 108709468 108709837 -90920313 + MLT1A1 LTR MaLR 1 365 0 181 304 0 0 chr5 108710109 108710155 -90919995 + L2 LINE L2 3188 3233 -39 305 218 0 109 chr5 108710796 108710897 -90919253 + Charlie8 DNA MER1_type 251 2416 -1 180 0 0 0 chr5 108711288 108711308 -90918842 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1251 288 33 40 chr5 108711360 108711840 -90918310 - L2 LINE L2 0 3313 2837 21 0 0 0 chr5 108712899 108712920 -90917230 + AT_rich Low_complexity Low_complexity 1 21 0 425 248 231 76 chr5 108716194 108716484 -90913666 - MER102b DNA MER1_type -3 338 4 40 87 0 0 chr5 108716725 108716828 -90913322 + AT_rich Low_complexity Low_complexity 1 103 0 24 0 0 0 chr5 108717163 108717187 -90912963 + AT_rich Low_complexity Low_complexity 1 24 0 253 297 11 0 chr5 108717810 108717901 -90912249 + (TA)n Simple_repeat Simple_repeat 1 92 0 3977 158 14 12 chr5 108718870 108719590 -90910560 + L1MA6 LINE L1 5557 6277 -23 333 346 98 13 chr5 108719701 108719854 -90910296 + MIR SINE MIR 15 180 -82 206 270 122 14 chr5 108720056 108720130 -90910020 - MIR3 SINE MIR -14 194 113 1591 147 87 76 chr5 108720225 108720338 -90909812 + THE1C LTR MaLR 3 113 -262 7683 90 4 18 chr5 108720338 108721424 -90908726 + MER11C LTR ERVK 1 1071 0 1591 147 87 76 chr5 108721424 108721678 -90908472 + THE1C LTR MaLR 113 374 -1 308 261 15 0 chr5 108721787 108721852 -90908298 + L2 LINE L2 3248 3313 0 23 68 0 0 chr5 108722389 108722433 -90907717 + AT_rich Low_complexity Low_complexity 1 44 0 244 261 108 23 chr5 108722546 108722676 -90907474 + L2 LINE L2 1277 1417 -1897 2409 294 52 40 chr5 108722811 108723911 -90906239 + L2 LINE L2 1602 2789 -525 180 0 0 0 chr5 108724651 108724671 -90905479 + (TC)n Simple_repeat Simple_repeat 2 21 0 * 870 107 0 0 chr5 108724670 108724829 -90905321 + (TA)n Simple_repeat Simple_repeat 2 160 0 2197 71 4 0 chr5 108724829 108725110 -90905040 - AluY SINE Alu -29 282 1 2107 126 0 0 chr5 108725946 108726255 -90903895 - AluSx SINE Alu -1 311 3 255 232 101 0 chr5 108726492 108726561 -90903589 - MIR3 SINE MIR -42 166 91 261 328 99 23 chr5 108726887 108727018 -90903132 - MER5A DNA MER1_type 0 189 49 308 319 60 9 chr5 108727901 108728017 -90902133 + L2 LINE L2 3191 3312 -1 381 220 80 0 chr5 108728030 108728130 -90902020 + MER113 DNA MER1_type? 7 114 -407 35 63 0 0 chr5 108730994 108731057 -90899093 + AT_rich Low_complexity Low_complexity 1 63 0 347 279 51 44 chr5 108732075 108732233 -90897917 + MIR SINE MIR 2 160 -102 21 57 0 0 chr5 108732298 108732333 -90897817 + AT_rich Low_complexity Low_complexity 1 35 0 337 293 98 96 chr5 108732499 108733031 -90897119 - L2 LINE L2 -520 2794 2262 286 299 191 20 chr5 108733176 108733323 -90896827 + MIR SINE MIR 20 191 -71 204 125 0 0 chr5 108735443 108735475 -90894675 + (TC)n Simple_repeat Simple_repeat 1 32 0 212 143 0 0 chr5 108735916 108735951 -90894199 + (TATG)n Simple_repeat Simple_repeat 2 36 0 22 99 0 0 chr5 108736668 108736739 -90893411 + AT_rich Low_complexity Low_complexity 1 71 0 297 331 0 65 chr5 108736844 108736968 -90893182 + MIR3 SINE MIR 75 190 -18 1628 158 34 20 chr5 108738403 108738695 -90891455 - AluJo SINE Alu -16 296 1 324 262 81 20 chr5 108740420 108740569 -90889581 + L1ME3A LINE L1 5129 5286 -860 906 283 82 23 chr5 108740571 108741098 -90889052 + L1ME3A LINE L1 5293 5850 -320 638 308 49 0 chr5 108741098 108741283 -90888867 + MIR SINE MIR 15 208 -54 895 286 34 48 chr5 108741417 108741770 -90888380 - L2 LINE L2 0 3313 2966 35 0 0 0 chr5 108741974 108742009 -90888141 + AT_rich Low_complexity Low_complexity 1 35 0 669 269 47 10 chr5 108744301 108744494 -90885656 - MIR SINE MIR 0 262 63 216 0 0 0 chr5 108744562 108744586 -90885564 + (TA)n Simple_repeat Simple_repeat 2 25 0 1024 306 102 68 chr5 108744739 108745514 -90884636 + L2 LINE L2 1808 2608 -706 376 309 80 77 chr5 108745524 108745835 -90884315 + L2 LINE L2 2496 2807 -507 184 158 132 0 chr5 108745841 108745879 -90884271 - L2 LINE L2 -65 3248 3206 425 276 32 32 chr5 108747952 108748169 -90881981 - L1M4 LINE L1 -1113 5033 4817 24 53 0 0 chr5 108750091 108750129 -90880021 + GC_rich Low_complexity Low_complexity 1 38 0 208 286 29 57 chr5 108750591 108750696 -90879454 + MIR SINE MIR 161 262 0 2337 88 0 7 chr5 108750967 108751275 -90878875 - AluSx SINE Alu -6 306 1 983 238 146 61 chr5 108751399 108751974 -90878176 - L1MC5 LINE L1 -76 7885 7262 66 70 0 0 chr5 108752079 108752208 -90877942 + AT_rich Low_complexity Low_complexity 1 129 0 1657 204 42 88 chr5 108752208 108752476 -90877674 - L1MC4 LINE L1 -733 7228 6949 14905 126 19 15 chr5 108752476 108753773 -90876377 + Tigger1 DNA MER2_type 1 1292 -1126 2025 89 3 77 chr5 108753773 108754109 -90876041 + AluY SINE Alu 1 311 0 14905 126 19 15 chr5 108754109 108754401 -90875749 + Tigger1 DNA MER2_type 1292 1581 -837 2145 94 0 60 chr5 108754401 108754719 -90875431 + AluSq SINE Alu 1 299 -14 14905 126 19 15 chr5 108754719 108755535 -90874615 + Tigger1 DNA MER2_type 1581 2416 -2 1594 114 146 0 chr5 108755536 108755790 -90874360 + AluSc SINE Alu 1 291 -8 1657 204 42 88 chr5 108755790 108756149 -90874001 - L1MC4 LINE L1 -1011 6950 6657 1144 265 98 41 chr5 108756630 108757067 -90873083 + LTR16C LTR ERVL 30 491 0 21 0 0 0 chr5 108757630 108757651 -90872499 + AT_rich Low_complexity Low_complexity 1 21 0 2128 142 0 0 chr5 108757942 108758251 -90871899 - AluSx SINE Alu -3 309 1 505 354 128 25 chr5 108758262 108758629 -90871521 + L2 LINE L2 2899 3303 -10 329 281 72 80 chr5 108758933 108759180 -90870970 + MLT1I LTR MaLR 1 244 -165 2119 102 3 0 chr5 108759180 108759486 -90870664 + AluSp SINE Alu 1 307 0 329 281 72 80 chr5 108759486 108759641 -90870509 + MLT1I LTR MaLR 244 399 -10 260 335 99 31 chr5 108762748 108762909 -90867241 + L2 LINE L2 2534 2705 -609 380 111 16 0 chr5 108763653 108763716 -90866434 + (GGGA)n Simple_repeat Simple_repeat 4 67 0 603 227 74 37 chr5 108765835 108765998 -90864152 + MIR SINE MIR 45 213 -49 1323 109 0 0 chr5 108766100 108766283 -90863867 + AluSg/x SINE Alu 129 311 -1 368 219 19 48 chr5 108766689 108766794 -90863356 - MIR SINE MIR -94 168 67 21 0 0 0 chr5 108766818 108766839 -90863311 + AT_rich Low_complexity Low_complexity 1 21 0 385 236 112 0 chr5 108767788 108767877 -90862273 - MLT1I LTR MaLR -18 391 293 269 273 0 0 chr5 108767964 108768030 -90862120 - MLT1I LTR MaLR -238 171 106 300 53 0 0 chr5 108768128 108768166 -90861984 + (TG)n Simple_repeat Simple_repeat 1 38 0 27 73 0 0 chr5 108768823 108768878 -90861272 + AT_rich Low_complexity Low_complexity 1 55 0 332 211 106 16 chr5 108769325 108769448 -90860702 - L1MC4 LINE L1 0 8042 7909 204 380 0 0 chr5 108770712 108770791 -90859359 - MIR3 SINE MIR -21 187 109 223 220 121 98 chr5 108772198 108772330 -90857820 - MIR SINE MIR -6 256 122 246 333 52 62 chr5 108772424 108772520 -90857630 - L2 LINE L2 -52 3220 3126 26 0 0 0 chr5 108775391 108775417 -90854733 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 108775747 108775768 -90854382 + AT_rich Low_complexity Low_complexity 1 21 0 2601 33 0 3 chr5 108775930 108776234 -90853916 - AluY SINE Alu -8 303 1 322 344 80 33 chr5 108776665 108776816 -90853334 - L3b LINE CR1 -36 1547 1390 240 143 0 0 chr5 108777275 108777317 -90852833 + (GGA)n Simple_repeat Simple_repeat 2 43 0 2592 191 31 39 chr5 108778357 108778400 -90851750 - L1MC/D LINE L1 -718 5524 5482 4226 188 43 11 chr5 108778400 108779298 -90850852 - L1MC2 LINE L1 -9 6335 5409 2592 191 31 39 chr5 108779298 108780204 -90849946 - L1MC/D LINE L1 -760 5482 4567 1524 241 71 7 chr5 108780248 108780696 -90849454 - L1MC/D LINE L1 -1495 4651 4175 187 103 44 29 chr5 108780706 108780743 -90849407 + (TA)n Simple_repeat Simple_repeat 1 41 -28 2228 98 7 0 chr5 108780743 108781040 -90849110 + AluSq SINE Alu 1 299 -14 187 103 44 29 chr5 108781040 108781070 -90849080 + (TA)n Simple_repeat Simple_repeat 41 69 0 1636 278 171 52 chr5 108781487 108782161 -90847989 + L2 LINE L2 55 892 -2422 2115 182 40 52 chr5 108782161 108782666 -90847484 - MLT1D LTR MaLR -4 501 3 1636 278 171 52 chr5 108782666 108783010 -90847140 + L2 LINE L2 892 1194 -2120 515 259 177 18 chr5 108783473 108783693 -90846457 + L2 LINE L2 3049 3303 -10 1974 99 40 30 chr5 108784073 108784377 -90845773 + AluY SINE Alu 1 307 -4 2284 89 0 19 chr5 108784418 108784731 -90845419 + AluSx SINE Alu 1 307 -5 606 314 31 42 chr5 108784913 108785200 -90844950 + MLT1K LTR MaLR 45 328 -260 338 230 54 0 chr5 108786280 108786354 -90843796 + MLT1K LTR MaLR 403 480 -108 672 269 0 33 chr5 108786357 108786539 -90843611 - LTR16A LTR ERVL -2 448 273 911 310 79 38 chr5 108787230 108787940 -90842210 - L2 LINE L2 -15 3298 2456 282 336 38 38 chr5 108788399 108788530 -90841620 + L2 LINE L2 3137 3267 -5 4030 276 67 16 chr5 108789463 108790880 -90839270 + L2 LINE L2 1671 3149 -164 463 266 53 27 chr5 108790925 108791113 -90839037 + MLT1J2 LTR MaLR 61 253 -197 524 223 39 0 chr5 108793139 108793269 -90836881 - MIR SINE MIR 0 262 128 1155 75 56 0 chr5 108793345 108793505 -90836645 - MSTA LTR MaLR 0 428 260 757 86 34 0 chr5 108793507 108793624 -90836526 - MSTA LTR MaLR -307 121 1 1102 209 4 22 chr5 108793845 108794070 -90836080 + MER58A DNA MER1_type 4 224 0 198 337 56 45 chr5 108795818 108795907 -90834243 - L2 LINE L2 -46 3226 3137 260 353 10 20 chr5 108796976 108797025 -90833125 - L2 LINE L2 0 3313 3265 2446 72 0 0 chr5 108797025 108797330 -90832820 - AluY SINE Alu -2 309 5 260 353 10 20 chr5 108797330 108797382 -90832768 - L2 LINE L2 -48 3265 3213 1255 153 0 0 chr5 108797382 108797578 -90832572 + MSTA LTR MaLR 1 196 -232 226 91 0 0 chr5 108797579 108797612 -90832538 + Alu SINE Alu 1 33 -266 1168 205 39 0 chr5 108797713 108797942 -90832208 + MSTA LTR MaLR 191 428 0 24 0 0 0 chr5 108798796 108798820 -90831330 + AT_rich Low_complexity Low_complexity 1 24 0 201 74 0 0 chr5 108798820 108798847 -90831303 + (CA)n Simple_repeat Simple_repeat 1 27 0 2301 60 3 0 chr5 108798880 108799164 -90830986 - AluY SINE Alu -26 285 1 298 316 110 7 chr5 108799187 108799323 -90830827 - MIR SINE MIR -111 151 2 268 268 105 23 chr5 108799672 108799796 -90830354 - MIR SINE MIR -63 145 4 185 0 40 0 chr5 108800620 108800645 -90829505 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 26 50 0 0 chr5 108801643 108801683 -90828467 + AT_rich Low_complexity Low_complexity 1 40 0 243 0 0 0 chr5 108802222 108802249 -90827901 + (CA)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr5 108802752 108802773 -90827377 + AT_rich Low_complexity Low_complexity 1 21 0 184 261 153 36 chr5 108803772 108803883 -90826267 - MIR SINE MIR -118 144 21 965 253 172 24 chr5 108804035 108804489 -90825661 - MER113 DNA MER1_type? 0 521 1 2239 99 3 10 chr5 108805371 108805675 -90824475 + AluSx SINE Alu 3 304 -8 193 311 0 16 chr5 108805996 108806057 -90824093 + L2 LINE L2 3250 3309 -4 685 250 35 40 chr5 108806104 108806304 -90823846 + MIR SINE MIR 46 244 -18 245 264 81 11 chr5 108806472 108806559 -90823591 + MIR3 SINE MIR 114 206 -2 304 325 68 11 chr5 108807239 108807430 -90822720 + L2 LINE L2 1801 2002 -1312 1318 307 76 32 chr5 108807515 108808181 -90821969 + L2 LINE L2 2466 3165 -148 193 237 17 17 chr5 108808208 108808267 -90821883 + L2 LINE L2 2302 2360 -954 301 320 88 102 chr5 108808320 108808673 -90821477 + L2 LINE L2 2919 3266 -6 252 234 13 78 chr5 108809431 108809508 -90820642 + MIR SINE MIR 120 191 -71 540 231 34 82 chr5 108810071 108810279 -90819871 - HERVL LTR ERVL -540 4456 4259 281 352 23 8 chr5 108810485 108810613 -90819537 - HERVL LTR ERVL -1155 4330 4201 2596 195 53 4 chr5 108810761 108811284 -90818866 - MER44D DNA MER2_type -1 604 1 357 310 40 23 chr5 108811448 108811622 -90818528 - HERVL LTR ERVL -2968 2686 2510 2047 103 10 7 chr5 108811947 108812239 -90817911 - AluSc SINE Alu -15 294 2 933 254 88 77 chr5 108812272 108812729 -90817421 - LTR16B LTR ERVL 0 464 3 1758 147 0 66 chr5 108813750 108814070 -90816080 + AluJb SINE Alu 1 299 -13 268 200 67 22 chr5 108814305 108814395 -90815755 - L1MC/D LINE L1 -2339 5469 5376 202 298 18 0 chr5 108814397 108814454 -90815696 + (TATG)n Simple_repeat Simple_repeat 2 59 0 23 33 0 0 chr5 108814474 108814504 -90815646 + AT_rich Low_complexity Low_complexity 1 30 0 206 116 87 43 chr5 108814790 108814859 -90815291 + (TTAAA)n Simple_repeat Simple_repeat 1 72 0 183 80 0 0 chr5 108814879 108814904 -90815246 + (TG)n Simple_repeat Simple_repeat 1 25 0 249 308 24 81 chr5 108815116 108815242 -90814908 - L1ME3A LINE L1 -7 6163 6052 2451 64 0 0 chr5 108815242 108815539 -90814611 + AluY SINE Alu 1 297 -14 249 308 24 81 chr5 108815539 108815623 -90814527 - L1ME3A LINE L1 -118 6052 5965 2085 234 55 80 chr5 108815713 108816695 -90813455 - L1MC5 LINE L1 -434 7527 6635 489 330 98 33 chr5 108817021 108817591 -90812559 - HAL1b LINE L1 -613 735 129 1611 261 85 6 chr5 108817676 108818194 -90811956 - L1ME1 LINE L1 -9 6157 5599 207 203 17 34 chr5 108818468 108818527 -90811623 - MIR SINE MIR -10 252 195 22 56 0 0 chr5 108818572 108818608 -90811542 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 108818843 108818872 -90811278 + AT_rich Low_complexity Low_complexity 1 29 0 389 206 49 39 chr5 108821539 108821641 -90808509 + MER112 DNA MER1_type 152 254 -6 285 308 86 15 chr5 108821953 108822137 -90808013 - MIR3 SINE MIR -2 206 6 292 271 148 36 chr5 108822760 108823118 -90807032 + L1ME4a LINE L1 5721 6118 -3 213 132 0 0 chr5 108824296 108824334 -90805816 + (TTTTC)n Simple_repeat Simple_repeat 5 42 0 1835 173 3 0 chr5 108825146 108825447 -90804703 - AluSx SINE Alu -9 303 2 201 204 0 23 chr5 108828645 108828689 -90801461 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 375 210 0 12 chr5 108828710 108828791 -90801359 + MER69 DNA AcHobo 1 80 -97 2477 48 0 10 chr5 108829231 108829544 -90800606 + AluY SINE Alu 1 310 -1 1251 212 97 25 chr5 108829558 108829950 -90800200 + MER69 DNA AcHobo 2107 2526 0 824 244 136 64 chr5 108830094 108830565 -90799585 + MLT1D LTR MaLR 1 505 0 2243 90 13 13 chr5 108830852 108831162 -90798988 + AluSq SINE Alu 1 310 -3 2090 124 14 0 chr5 108831655 108831945 -90798205 + AluSg SINE Alu 2 295 -15 21 36 0 0 chr5 108831990 108832018 -90798132 + AT_rich Low_complexity Low_complexity 1 28 0 320 233 41 14 chr5 108833611 108833684 -90796466 + L2 LINE L2 3239 3313 0 2282 159 46 20 chr5 108834037 108834695 -90795455 + LTR26E LTR ERV1 2 615 -7 194 333 205 0 chr5 108835554 108835671 -90794479 - MIR3 SINE MIR -30 178 38 26 82 0 0 chr5 108835953 108836014 -90794136 + AT_rich Low_complexity Low_complexity 1 61 0 351 378 15 84 chr5 108836121 108836513 -90793637 - L2 LINE L2 -39 3233 2869 712 323 35 4 chr5 108837278 108837504 -90792646 - MIR SINE MIR -4 258 26 247 250 62 62 chr5 108837926 108838022 -90792128 - MIR SINE MIR -50 212 117 219 274 16 0 chr5 108839332 108839394 -90790756 + MIR SINE MIR 58 120 -142 25 31 0 0 chr5 108841005 108841037 -90789113 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr5 108841870 108841902 -90788248 + AT_rich Low_complexity Low_complexity 1 32 0 276 313 42 0 chr5 108842517 108842613 -90787537 + L2 LINE L2 3161 3260 -12 780 295 69 0 chr5 108843907 108844124 -90786026 - MIR SINE MIR 0 262 31 784 245 50 55 chr5 108844306 108844649 -90785501 + Charlie8 DNA MER1_type 59 399 -2018 215 304 0 0 chr5 108845057 108845136 -90785014 + (CA)n Simple_repeat Simple_repeat 2 80 0 259 289 0 13 chr5 108846232 108846308 -90783842 + CT-rich Low_complexity Low_complexity 3 77 0 256 229 57 107 chr5 108846313 108846373 -90783777 - L2 LINE L2 -23 3290 3229 1757 185 45 21 chr5 108846373 108846751 -90783399 - MLT1B LTR MaLR -3 387 1 256 229 57 107 chr5 108846751 108846830 -90783320 - L2 LINE L2 -84 3229 3158 253 235 86 12 chr5 108846893 108846974 -90783176 + MIR3 SINE MIR 118 204 -4 344 333 167 14 chr5 108847901 108848111 -90782039 - MIR SINE MIR 0 262 21 461 254 15 37 chr5 108848513 108848647 -90781503 - L2 LINE L2 -4 3309 3179 257 128 21 0 chr5 108849219 108849266 -90780884 + (TA)n Simple_repeat Simple_repeat 2 49 0 196 279 0 81 chr5 108849346 108849457 -90780693 - L2 LINE L2 -213 3059 2958 2239 107 0 0 chr5 108849825 108850133 -90780017 + AluSg1 SINE Alu 1 308 -1 1490 225 110 50 chr5 108850196 108850872 -90779278 - L1ME3A LINE L1 -7 6163 5529 2083 129 56 6 chr5 108850872 108851229 -90778921 - THE1C LTR MaLR 0 375 1 1490 225 110 50 chr5 108851229 108851380 -90778770 - L1ME3A LINE L1 -641 5529 5389 6458 120 26 21 chr5 108851380 108852445 -90777705 - MER11C LTR ERVK 0 1071 1 1490 225 110 50 chr5 108852445 108852472 -90777678 - L1ME3A LINE L1 -781 5389 5208 567 277 48 45 chr5 108853090 108853439 -90776711 - MLT1L LTR MaLR -67 527 108 25 31 0 0 chr5 108853540 108853572 -90776578 + AT_rich Low_complexity Low_complexity 1 32 0 334 211 211 18 chr5 108853705 108853876 -90776274 - L1MC4 LINE L1 -1251 6791 6588 186 189 0 0 chr5 108853876 108853913 -90776237 + (CATA)n Simple_repeat Simple_repeat 2 38 0 1041 71 0 29 chr5 108853931 108854071 -90776079 - AluY SINE Alu -19 292 157 387 257 63 7 chr5 108854079 108854212 -90775938 - L1MC4 LINE L1 -1428 6567 6444 21 95 0 0 chr5 108854702 108854765 -90775385 + AT_rich Low_complexity Low_complexity 1 63 0 1303 270 73 85 chr5 108856098 108856680 -90773470 + L2 LINE L2 1327 1898 -1416 2382 78 0 28 chr5 108856680 108857001 -90773149 + AluSp SINE Alu 2 313 0 1303 270 73 85 chr5 108857001 108857229 -90772921 + L2 LINE L2 1898 2127 -1187 212 179 0 0 chr5 108857327 108857366 -90772784 + T-rich Low_complexity Low_complexity 1 39 0 622 288 110 32 chr5 108857380 108857661 -90772489 + L2 LINE L2 3011 3313 0 23 33 0 0 chr5 108858215 108858245 -90771905 + AT_rich Low_complexity Low_complexity 1 30 0 187 299 52 62 chr5 108858318 108858415 -90771735 + MIR SINE MIR 52 147 -115 653 278 5 11 chr5 108858435 108858622 -90771528 + MER117 DNA MER1_type 9 194 -3 277 184 0 0 chr5 108858622 108858671 -90771479 + MIR3 SINE MIR 151 199 -9 24 32 0 0 chr5 108858814 108858845 -90771305 + AT_rich Low_complexity Low_complexity 1 31 0 184 306 0 48 chr5 108859720 108859782 -90770368 - L3 LINE CR1 -1 1576 1518 282 304 163 7 chr5 108860753 108860888 -90769262 - MIR3 SINE MIR -48 160 5 1699 153 0 0 chr5 108862852 108863114 -90767036 + AluY SINE Alu 44 305 -6 183 294 118 15 chr5 108863791 108863859 -90766291 + MER5A DNA MER1_type 9 83 -106 192 171 0 0 chr5 108864182 108864217 -90765933 + MER5A DNA MER1_type 148 182 -7 429 239 106 9 chr5 108866156 108866269 -90763881 + MIR3 SINE MIR 85 208 0 255 93 0 0 chr5 108866735 108866778 -90763372 + (T)n Simple_repeat Simple_repeat 1 43 0 2460 61 0 3 chr5 108868712 108869007 -90761143 - AluY SINE Alu -17 294 1 580 256 199 5 chr5 108869352 108869543 -90760607 - MIR SINE MIR -33 229 2 2175 174 7 33 chr5 108870005 108870430 -90759720 + MLT2D LTR ERVL 1 414 0 609 270 87 39 chr5 108870432 108870837 -90759313 + MLT1L LTR MaLR 88 598 -17 329 331 70 37 chr5 108870919 108871161 -90758989 - MER102a DNA MER1_type -10 320 71 2202 117 7 0 chr5 108872902 108873210 -90756940 + AluSx SINE Alu 3 312 0 2394 81 0 0 chr5 108874317 108874614 -90755536 - AluY SINE Alu -14 297 1 1738 178 20 0 chr5 108874618 108874910 -90755240 - AluJo SINE Alu -4 308 11 318 250 95 54 chr5 108875230 108875357 -90754793 + L2 LINE L2 2158 2295 -1019 1932 169 45 36 chr5 108875357 108875777 -90754373 - MSTB LTR MaLR 0 426 3 318 250 95 54 chr5 108875777 108875817 -90754333 + L2 LINE L2 2295 2332 -982 37 62 0 0 chr5 108876022 108876087 -90754063 + AT_rich Low_complexity Low_complexity 1 65 0 325 357 81 19 chr5 108876841 108877051 -90753099 - MIR SINE MIR -28 234 12 2286 125 0 0 chr5 108877760 108878071 -90752079 - AluSx SINE Alu -1 311 1 2223 117 0 7 chr5 108879367 108879674 -90750476 - AluSx SINE Alu -7 305 1 211 330 33 22 chr5 108880312 108880403 -90749747 - MIR SINE MIR -63 145 66 24 32 0 0 chr5 108882364 108882395 -90747755 + AT_rich Low_complexity Low_complexity 1 31 0 2841 10 0 0 chr5 108882683 108882994 -90747156 + AluY SINE Alu 1 311 0 249 33 0 0 chr5 108884145 108884175 -90745975 + (TG)n Simple_repeat Simple_repeat 1 30 0 296 259 113 26 chr5 108884857 108885002 -90745148 - MIR SINE MIR -58 204 41 3818 215 50 15 chr5 108885191 108886070 -90744080 + L1MCa LINE L1 20 929 -5497 614 126 81 0 chr5 108886094 108886205 -90743945 - L1MCa LINE L1 -4127 2299 2180 314 151 75 75 chr5 108886204 108886297 -90743853 + L1MCa LINE L1 920 1012 -5414 * 584 194 62 60 chr5 108886300 108886745 -90743405 + L1MCa LINE L1 2254 2698 -3728 1805 219 60 13 chr5 108886874 108887321 -90742829 + L1MCa LINE L1 462 929 -5497 614 126 81 0 chr5 108887346 108887457 -90742693 - L1MCa LINE L1 -4127 2299 2180 343 168 59 79 chr5 108887456 108887557 -90742593 + L1MCa LINE L1 920 1018 -5408 * 1255 219 22 51 chr5 108887555 108888159 -90741991 + L1MCa LINE L1 2254 2839 -3587 943 223 29 70 chr5 108888263 108888604 -90741546 + L1M4 LINE L1 4313 4639 -1507 438 283 66 18 chr5 108889715 108889881 -90740269 - MIR SINE MIR 0 262 89 1900 194 42 123 chr5 108889933 108890363 -90739787 - MLT1F1 LTR MaLR 0 567 201 1201 209 121 21 chr5 108890363 108890703 -90739447 + MLT1A2 LTR MaLR 1 374 0 1900 194 42 123 chr5 108890703 108890889 -90739261 - MLT1F1 LTR MaLR -366 201 1 2037 100 31 3 chr5 108891176 108891467 -90738683 - AluSc SINE Alu -8 301 3 2419 75 0 0 chr5 108891478 108891786 -90738364 - AluY SINE Alu -3 308 1 703 280 78 5 chr5 108891897 108892115 -90738035 + MIR SINE MIR 26 259 -3 216 0 0 0 chr5 108892164 108892188 -90737962 + (T)n Simple_repeat Simple_repeat 1 24 0 349 385 68 6 chr5 108893122 108893283 -90736867 + MER5B DNA MER1_type 5 175 -3 2350 78 0 19 chr5 108893776 108894084 -90736066 + AluY SINE Alu 1 302 -9 340 164 0 0 chr5 108894206 108894261 -90735889 + L2 LINE L2 3257 3311 -2 282 29 0 0 chr5 108894351 108894386 -90735764 + (TG)n Simple_repeat Simple_repeat 2 36 0 592 302 103 29 chr5 108894959 108895201 -90734949 - MIR SINE MIR 0 262 3 28 86 0 0 chr5 108895354 108895424 -90734726 + AT_rich Low_complexity Low_complexity 1 70 0 2287 77 13 3 chr5 108895610 108895910 -90734240 + AluSc SINE Alu 1 303 -6 2424 76 0 10 chr5 108898306 108898620 -90731530 + AluY SINE Alu 1 311 0 467 198 0 0 chr5 108898693 108898774 -90731376 - L1MA9 LINE L1 -52 6260 6180 2317 148 25 38 chr5 108898776 108899221 -90730929 - L1MA9 LINE L1 -231 6081 5643 260 130 22 0 chr5 108899259 108899305 -90730845 - MLT1I LTR MaLR -358 51 5 750 254 140 12 chr5 108899311 108899646 -90730504 - HAL1 LINE L1 -910 1597 1220 * 1517 251 124 43 chr5 108899627 108900328 -90729822 - HAL1 LINE L1 -1510 997 240 1790 110 3 60 chr5 108900626 108900715 -90729435 + AluSq SINE Alu 30 122 -191 2113 125 6 10 chr5 108900715 108901028 -90729122 - AluSq SINE Alu -1 312 1 1790 110 3 60 chr5 108901028 108901239 -90728911 + AluSq SINE Alu 122 313 0 360 0 0 0 chr5 108901836 108901876 -90728274 + (TG)n Simple_repeat Simple_repeat 1 40 0 209 286 32 0 chr5 108902711 108902774 -90727376 + (ATG)n Simple_repeat Simple_repeat 2 66 0 510 307 69 11 chr5 108902796 108902985 -90727165 - MIR SINE MIR -13 249 50 228 218 0 0 chr5 108904367 108904422 -90725728 + (TGGG)n Simple_repeat Simple_repeat 1 55 0 2028 133 4 0 chr5 108904422 108904701 -90725449 - AluSg SINE Alu -30 280 1 664 291 76 70 chr5 108905630 108906159 -90723991 + MLT1K LTR MaLR 47 578 -10 242 220 0 20 chr5 108906766 108906816 -90723334 + L2 LINE L2 3261 3309 -4 22 0 0 0 chr5 108909480 108909502 -90720648 + AT_rich Low_complexity Low_complexity 1 22 0 1631 150 107 26 chr5 108909768 108910115 -90720035 - THE1C LTR MaLR 0 375 1 9376 105 11 123 chr5 108910115 108911514 -90718636 - THE1C-int LTR MaLR 0 1580 419 2243 121 3 0 chr5 108911514 108911820 -90718330 + AluSx SINE Alu 6 312 0 9376 105 11 123 chr5 108911820 108912198 -90717952 - THE1C-int LTR MaLR -1161 419 1 1912 128 69 28 chr5 108912198 108912558 -90717592 - THE1C LTR MaLR 0 375 1 29 60 0 0 chr5 108913073 108913123 -90717027 + AT_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr5 108914206 108914235 -90715915 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr5 108914620 108914650 -90715500 + AT_rich Low_complexity Low_complexity 1 30 0 2443 70 0 6 chr5 108914749 108915062 -90715088 - AluY SINE Alu 0 311 1 300 364 16 0 chr5 108915802 108915923 -90714227 + L3 LINE CR1 1448 1570 -7 2901 0 0 0 chr5 108916240 108916550 -90713600 + AluYa5 SINE Alu 1 310 -1 222 37 0 0 chr5 108916550 108916577 -90713573 + (TG)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr5 108917383 108917403 -90712747 + (TG)n Simple_repeat Simple_repeat 1 20 0 2443 70 0 0 chr5 108917531 108917832 -90712318 + AluSg1 SINE Alu 1 301 -8 27 73 0 0 chr5 108919263 108919318 -90710832 + AT_rich Low_complexity Low_complexity 1 55 0 27 73 0 0 chr5 108920174 108920229 -90709921 + AT_rich Low_complexity Low_complexity 1 55 0 233 203 54 0 chr5 108920289 108920363 -90709787 - HAL1 LINE L1 -109 2398 2321 250 275 9 104 chr5 108920458 108920680 -90709470 - HAL1 LINE L1 -420 2087 1887 2318 274 149 49 chr5 108920807 108922533 -90707617 - HAL1 LINE L1 -608 1899 2 467 316 50 32 chr5 108923226 108923504 -90706646 - HAL1 LINE L1 -2223 284 2 22 0 0 0 chr5 108924073 108924095 -90706055 + AT_rich Low_complexity Low_complexity 1 22 0 982 322 48 6 chr5 108924095 108924452 -90705698 + L2 LINE L2 2397 2768 -546 2379 88 0 10 chr5 108924793 108925098 -90705052 - AluY SINE Alu -9 302 1 241 323 68 45 chr5 108925110 108925243 -90704907 + L2 LINE L2 2782 2917 -397 1478 268 69 55 chr5 109125427 109126520 -90503630 - L1 LINE L1 -1216 4930 3773 3710 212 22 25 chr5 109126548 109127454 -90502696 - L1MA10 LINE L1 -4 7032 6130 3304 140 38 19 chr5 109127454 109127965 -90502185 - L1MA4A LINE L1 0 6303 5776 201 74 0 0 chr5 109127965 109127992 -90502158 + (TATG)n Simple_repeat Simple_repeat 2 28 0 3304 140 38 19 chr5 109127992 109128108 -90502042 - L1MA4A LINE L1 -527 5776 5664 1407 108 31 27 chr5 109128109 109128138 -90502012 - THE1A LTR MaLR -132 223 196 2730 19 0 3 chr5 109128138 109128450 -90501700 + AluYa5 SINE Alu 1 311 0 1407 108 31 27 chr5 109128450 109128642 -90501508 - THE1A LTR MaLR -159 196 1 3755 185 29 20 chr5 109128646 109129596 -90500554 - L1MA10 LINE L1 -748 6100 5191 5200 230 13 8 chr5 109129696 109131043 -90499107 - L1MA10 LINE L1 -2098 4750 3398 7619 232 42 9 chr5 109131084 109132868 -90497282 - L1MA10 LINE L1 -4373 2476 636 875 169 25 3 chr5 109132872 109133114 -90497036 - L1MA4A LINE L1 -744 5402 5229 2195 164 21 11 chr5 109133114 109133487 -90496663 - MSTB LTR MaLR -49 377 1 561 288 76 11 chr5 109133500 109133882 -90496268 - L1M4 LINE L1 -2357 4025 3619 1803 241 44 41 chr5 109133982 109134646 -90495504 - L1M4 LINE L1 -4984 1400 735 266 303 53 22 chr5 109134647 109134970 -90495180 + L1 LINE L1 4268 4600 -1546 393 251 81 85 chr5 109135173 109135420 -90494730 + L1 LINE L1 4756 5001 -1145 329 196 0 18 chr5 109135635 109135691 -90494459 + FLAM SINE Alu 62 116 -17 192 125 0 0 chr5 109136975 109137007 -90493143 + (TTA)n Simple_repeat Simple_repeat 2 33 0 33 43 0 0 chr5 109137275 109137322 -90492828 + AT_rich Low_complexity Low_complexity 1 47 0 474 311 17 17 chr5 109137428 109137605 -90492545 + MER5B DNA MER1_type 1 177 -1 284 381 65 43 chr5 109138000 109138399 -90491751 + L3 LINE CR1 309 716 -861 24 0 0 0 chr5 109139625 109139649 -90490501 + AT_rich Low_complexity Low_complexity 1 24 0 2047 21 0 0 chr5 109139649 109139888 -90490262 - L1PA3 LINE L1 -2 6153 5915 633 294 18 69 chr5 109140047 109140323 -90489827 + MER92B LTR ERV1 237 498 -138 6742 132 36 11 chr5 109140337 109140350 -90489800 + L1PBa LINE L1 4 15 -6848 3870 146 42 43 chr5 109140350 109141136 -90489014 + LTR1 LTR ERV1 1 785 0 6742 132 36 11 chr5 109141136 109142520 -90487630 + L1PBa LINE L1 15 1576 -5287 306 275 77 0 chr5 109142520 109142611 -90487539 + MER92A LTR ERV1 313 410 -2 22 70 0 0 chr5 109142733 109142776 -90487374 + AT_rich Low_complexity Low_complexity 1 43 0 235 294 119 0 chr5 109142913 109143056 -90487094 - L1M4 LINE L1 -1314 4832 4673 237 132 0 0 chr5 109143316 109143354 -90486796 + (A)n Simple_repeat Simple_repeat 1 38 0 1877 150 3 7 chr5 109145183 109145514 -90484636 - AluSx SINE Alu 0 330 1 2102 140 36 36 chr5 109146745 109147109 -90483041 + THE1B LTR MaLR 1 364 0 22 0 0 0 chr5 109147881 109147903 -90482247 + AT_rich Low_complexity Low_complexity 1 22 0 526 226 0 97 chr5 109148162 109148357 -90481793 - MER104 DNA MER2_type 0 180 5 27 0 0 0 chr5 109148371 109148398 -90481752 + AT_rich Low_complexity Low_complexity 1 27 0 234 339 55 0 chr5 109148717 109148826 -90481324 + L2 LINE L2 1964 2078 -1236 194 61 0 30 chr5 109149229 109149262 -90480888 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1625 140 0 62 chr5 109149264 109149556 -90480594 + AluSx SINE Alu 30 303 -9 479 411 79 72 chr5 109149619 109150164 -90479986 - L1MEd LINE L1 -5044 1075 527 6890 238 82 21 chr5 109150720 109152844 -90477306 + L1M4c LINE L1 2063 4411 -1971 11892 159 34 43 chr5 109152844 109154340 -90475810 + Tigger1 DNA MER2_type 1 1467 -951 1825 170 3 3 chr5 109154340 109154652 -90475498 + AluSx SINE Alu 1 312 0 11892 159 34 43 chr5 109154652 109155596 -90474554 + Tigger1 DNA MER2_type 1467 2418 0 6890 238 82 21 chr5 109155596 109156391 -90473759 + L1M4c LINE L1 4411 5156 -1226 818 108 7 58 chr5 109156393 109156532 -90473618 - L1M2 LINE L1 -663 5649 5518 * 1041 289 144 38 chr5 109156530 109157114 -90473036 - L1M3c LINE L1 -5028 1113 468 1677 289 37 5 chr5 109157117 109157522 -90472628 - L1M3c LINE L1 -5719 422 5 273 128 0 0 chr5 109157547 109157594 -90472556 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 31 44 0 0 chr5 109157594 109157639 -90472511 + AT_rich Low_complexity Low_complexity 1 45 0 1882 218 18 11 chr5 109157803 109158183 -90471967 + L1M1 LINE L1 13 395 -7170 * 6328 138 25 17 chr5 109158182 109159501 -90470649 + L1MA3 LINE L1 5183 6514 -27 306 0 0 0 chr5 109159501 109159535 -90470615 + (TA)n Simple_repeat Simple_repeat 2 35 0 6328 138 25 17 chr5 109159535 109159563 -90470587 + L1MA3 LINE L1 6514 6540 -1 23 0 0 0 chr5 109160238 109160261 -90469889 + AT_rich Low_complexity Low_complexity 1 23 0 30 27 0 0 chr5 109160729 109160766 -90469384 + AT_rich Low_complexity Low_complexity 1 37 0 874 141 0 27 chr5 109160899 109161084 -90469066 + (TCC)n Simple_repeat Simple_repeat 1 180 0 281 194 0 15 chr5 109161086 109161153 -90468997 + CT-rich Low_complexity Low_complexity 2 67 0 279 113 0 0 chr5 109164209 109164262 -90465888 + (TC)n Simple_repeat Simple_repeat 2 54 0 339 25 0 0 chr5 109164262 109164302 -90465848 + (CA)n Simple_repeat Simple_repeat 1 40 0 2199 72 13 23 chr5 109164673 109164980 -90465170 - AluY SINE Alu -7 304 1 230 140 0 40 chr5 109165895 109165945 -90464205 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 210 172 52 17 chr5 109165946 109166004 -90464146 + (CATATA)n Simple_repeat Simple_repeat 1 60 0 180 77 0 0 chr5 109167280 109167306 -90462844 + (TTTTTA)n Simple_repeat Simple_repeat 6 31 0 622 314 33 30 chr5 109167546 109167849 -90462301 - MLT1I LTR MaLR -2 407 104 194 79 0 26 chr5 109169792 109169830 -90460320 + (TATAA)n Simple_repeat Simple_repeat 3 39 0 835 230 75 0 chr5 109170995 109171195 -90458955 + MIR SINE MIR 33 247 -15 23 33 0 0 chr5 109171198 109171228 -90458922 + AT_rich Low_complexity Low_complexity 1 30 0 960 300 102 28 chr5 109172813 109173380 -90456770 + MER90 LTR ERV1 6 614 0 741 325 69 72 chr5 109173479 109174354 -90455796 + L2 LINE L2 2271 3136 -177 1129 253 78 9 chr5 109174356 109174925 -90455225 + L1MB8 LINE L1 2269 2883 -3499 * 3515 143 32 10 chr5 109174920 109175544 -90454606 + L1PA16 LINE L1 5281 5918 -248 3513 19 0 25 chr5 109175546 109175882 -90454268 - L1PA2 LINE L1 0 6155 5831 2404 4 0 0 chr5 109175882 109176145 -90454005 - AluYa5 SINE Alu -14 297 35 3513 19 0 25 chr5 109176145 109176240 -90453910 - L1PA2 LINE L1 -324 5831 5735 1302 62 3 4 chr5 109176236 109177317 -90452833 + L1PA16 LINE L1 4912 6165 -1 4351 225 98 63 chr5 109177336 109178104 -90452046 + L1MB8 LINE L1 3278 4018 -2396 318 26 0 0 chr5 109178104 109178143 -90452007 + (CA)n Simple_repeat Simple_repeat 1 39 0 4351 225 98 63 chr5 109178143 109178599 -90451551 + L1MB8 LINE L1 4018 4457 -1957 1624 101 26 123 chr5 109178599 109178907 -90451243 - AluSx SINE Alu -30 282 5 4351 225 98 63 chr5 109178907 109179476 -90450674 + L1MB8 LINE L1 4457 5005 -1409 206 61 0 30 chr5 109179476 109179509 -90450641 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 4351 225 98 63 chr5 109179509 109180745 -90449405 + L1MB8 LINE L1 5005 6406 -8 21 57 0 0 chr5 109180789 109180824 -90449326 + AT_rich Low_complexity Low_complexity 1 35 0 310 350 82 5 chr5 109181082 109181204 -90448946 - L1ME3 LINE L1 -212 5950 5804 1204 125 107 5 chr5 109181204 109181428 -90448722 - L1MA4 LINE L1 -3 6297 6051 310 350 82 5 chr5 109181428 109181511 -90448639 - L1ME3 LINE L1 -358 5804 5729 376 258 30 48 chr5 109181632 109181799 -90448351 - MER3 DNA MER1_type 0 2428 2265 368 219 57 8 chr5 109181812 109181935 -90448215 - MER3 DNA MER1_type -87 122 41 496 198 21 21 chr5 109182895 109182991 -90447159 + AluJ/FLAM SINE Alu 4 99 -213 35 24 0 0 chr5 109182996 109183038 -90447112 + AT_rich Low_complexity Low_complexity 1 42 0 1014 192 0 0 chr5 109183103 109183309 -90446841 + AluJo SINE Alu 111 316 0 1635 149 39 12 chr5 109183609 109183944 -90446206 - L1MA5 LINE L1 -5 6295 5952 28 61 0 0 chr5 109184632 109184681 -90445469 + AT_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr5 109184778 109184801 -90445349 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr5 109185031 109185074 -90445076 + AT_rich Low_complexity Low_complexity 1 43 0 28 0 0 0 chr5 109186260 109186288 -90443862 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 109186498 109186533 -90443617 + AT_rich Low_complexity Low_complexity 1 35 0 753 208 35 6 chr5 109186607 109186780 -90443370 - L1P LINE L1 -2071 4075 3898 2514 143 7 11 chr5 109186781 109187220 -90442930 + L1PA16 LINE L1 5730 6166 0 239 158 0 0 chr5 109187234 109187272 -90442878 + MLT1I LTR MaLR 14 51 -358 1587 180 90 49 chr5 109187300 109187828 -90442322 + L1MA9 LINE L1 5645 6290 -22 24 32 0 0 chr5 109188915 109188946 -90441204 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 109190820 109190842 -90439308 + AT_rich Low_complexity Low_complexity 1 22 0 299 257 25 98 chr5 109191340 109191472 -90438678 - HAL1 LINE L1 0 2507 2367 2136 131 10 44 chr5 109191472 109191860 -90438290 + THE1C LTR MaLR 1 375 0 299 257 25 98 chr5 109191860 109191929 -90438221 - HAL1 LINE L1 -140 2367 2329 2219 181 10 0 chr5 109191929 109192328 -90437822 + MER57A LTR ERV1 1 403 0 299 257 25 98 chr5 109192328 109192401 -90437749 - HAL1 LINE L1 -178 2329 2252 456 219 62 34 chr5 109192486 109192632 -90437518 - L1MD2 LINE L1 -16 6761 6612 3995 259 61 42 chr5 109192655 109195221 -90434929 - L1MD2 LINE L1 -239 6538 3928 1554 219 46 14 chr5 109195517 109195886 -90434264 - L1MC2 LINE L1 0 6344 5964 463 244 180 58 chr5 109195897 109196069 -90434081 - MIR SINE MIR -66 196 4 252 191 9 86 chr5 109196247 109196352 -90433798 + L1MC4 LINE L1 6607 6703 -1339 321 302 0 0 chr5 109196352 109196438 -90433712 - L1MC4 LINE L1 -1343 6699 6614 267 209 44 55 chr5 109196443 109196534 -90433616 + L1MCa LINE L1 663 752 -5674 637 290 0 0 chr5 109196543 109196712 -90433438 - L1MD2 LINE L1 -5212 833 665 209 239 0 0 chr5 109196723 109196769 -90433381 + MIR SINE MIR 217 262 0 295 167 14 42 chr5 109197320 109197392 -90432758 - AluS SINE Alu 0 300 231 695 144 9 0 chr5 109197392 109197503 -90432647 - AluSq/x SINE Alu -200 112 1 30 59 0 0 chr5 109197507 109197558 -90432592 + AT_rich Low_complexity Low_complexity 1 51 0 4487 172 68 5 chr5 109198253 109199095 -90431055 - MER4D LTR ERV1 -8 895 1 326 306 32 62 chr5 109199847 109200216 -90429934 + L1M4 LINE L1 3539 3896 -2250 556 311 79 42 chr5 109200660 109201431 -90428719 + L1M4 LINE L1 4309 5108 -1038 949 237 171 25 chr5 109201824 109202263 -90427887 + MLT1D LTR MaLR 3 505 0 27 0 0 0 chr5 109202992 109203019 -90427131 + AT_rich Low_complexity Low_complexity 1 27 0 28 48 0 0 chr5 109203299 109203341 -90426809 + AT_rich Low_complexity Low_complexity 1 42 0 455 306 127 24 chr5 109204852 109205344 -90424806 - L1ME3A LINE L1 -226 5944 5405 21 36 0 0 chr5 109205503 109205531 -90424619 + AT_rich Low_complexity Low_complexity 1 28 0 272 228 2 101 chr5 109205587 109205753 -90424397 - L1MEc LINE L1 -3940 2275 2168 328 295 106 42 chr5 109205783 109206000 -90424150 - L1MEc LINE L1 -4317 2079 1849 247 271 89 50 chr5 109206267 109206548 -90423602 - L1MEc LINE L1 -4935 1461 1170 1390 217 19 29 chr5 109206549 109206596 -90423554 - MLT2B3 LTR ERVL 0 554 508 377 20 20 0 chr5 109206596 109206646 -90423504 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 1390 217 19 29 chr5 109206646 109206911 -90423239 - MLT2B3 LTR ERVL -46 508 245 298 114 0 0 chr5 109206937 109206981 -90423169 - MSTB2 LTR MaLR 0 428 385 333 185 0 0 chr5 109206986 109207051 -90423099 + (TATG)n Simple_repeat Simple_repeat 2 66 0 259 157 133 72 chr5 109207051 109207134 -90423016 - MLT2B1 LTR ERVL -40 480 393 * 881 164 0 7 chr5 109207069 109207215 -90422935 - MSTB2 LTR MaLR -60 397 253 254 273 56 7 chr5 109207244 109207387 -90422763 - L1MEc LINE L1 -5232 1164 1015 551 329 65 55 chr5 109207390 109207895 -90422255 - L1MEc LINE L1 -5867 529 20 286 265 0 26 chr5 109208544 109208661 -90421489 + (TA)n Simple_repeat Simple_repeat 1 114 0 205 286 114 29 chr5 109208663 109208768 -90421382 + MER5B DNA MER1_type 51 164 -14 603 268 108 5 chr5 109210037 109210250 -90419900 - L1ME3A LINE L1 -13 6157 5923 2591 24 0 0 chr5 109210524 109210817 -90419333 - AluY SINE Alu -18 293 1 23 78 0 0 chr5 109211042 109211093 -90419057 + AT_rich Low_complexity Low_complexity 1 51 0 1511 105 140 4 chr5 109211548 109211813 -90418337 - AluSg1 SINE Alu 0 318 23 26 64 0 0 chr5 109212378 109212425 -90417725 + AT_rich Low_complexity Low_complexity 1 47 0 1698 132 12 4 chr5 109212982 109213240 -90416910 + AluSg SINE Alu 29 288 -22 194 62 31 0 chr5 109213240 109213272 -90416878 + (TA)n Simple_repeat Simple_repeat 2 34 0 1308 222 25 22 chr5 109213443 109213767 -90416383 + MLT1B LTR MaLR 66 390 0 746 243 22 49 chr5 109214154 109214524 -90415626 - L1M4 LINE L1 -2884 3262 2903 231 183 17 17 chr5 109214826 109214886 -90415264 + A-rich Low_complexity Low_complexity 3 62 0 6009 149 28 21 chr5 109214931 109215727 -90414423 - L1MA4A LINE L1 -6 6297 5508 2321 151 3 3 chr5 109215727 109216091 -90414059 - THE1B LTR MaLR 0 364 1 6009 149 28 21 chr5 109216091 109217055 -90413095 - L1MA4A LINE L1 -795 5508 4515 21 0 0 0 chr5 109217245 109217266 -90412884 + AT_rich Low_complexity Low_complexity 1 21 0 338 343 111 5 chr5 109217273 109217471 -90412679 + MIR SINE MIR 12 230 -32 211 327 109 0 chr5 109217704 109217814 -90412336 + MIR SINE MIR 48 169 -93 887 224 28 48 chr5 109217871 109218229 -90411921 - Charlie2 DNA MER1_type -440 2422 2072 29 0 0 0 chr5 109218941 109218970 -90411180 + AT_rich Low_complexity Low_complexity 1 29 0 2256 106 3 0 chr5 109219147 109219450 -90410700 + AluSx SINE Alu 1 304 -8 673 282 24 44 chr5 109219601 109219807 -90410343 - MER20 DNA MER1_type -17 202 1 27 62 0 0 chr5 109219830 109219878 -90410272 + AT_rich Low_complexity Low_complexity 1 48 0 436 205 13 115 chr5 109222373 109222529 -90407621 + L2 LINE L2 3169 3308 -5 23 0 0 0 chr5 109222541 109222564 -90407586 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 109222622 109222650 -90407500 + AT_rich Low_complexity Low_complexity 1 28 0 252 314 31 7 chr5 109222801 109222912 -90407238 - MIR SINE MIR -61 147 75 440 352 111 28 chr5 109223468 109223829 -90406321 - MLT1K LTR MaLR -8 580 190 2622 173 13 2 chr5 109224094 109224562 -90405588 - MER31A LTR ERV1 -12 473 1 1347 176 7 76 chr5 109224807 109225150 -90405000 + AluJo SINE Alu 3 324 0 38 51 0 0 chr5 109226778 109226837 -90403313 + AT_rich Low_complexity Low_complexity 1 59 0 336 24 0 0 chr5 109227078 109227119 -90403031 + (TG)n Simple_repeat Simple_repeat 2 42 0 195 129 0 0 chr5 109227393 109227424 -90402726 + (TA)n Simple_repeat Simple_repeat 1 31 0 2552 64 0 6 chr5 109227426 109227739 -90402411 - AluY SINE Alu 0 311 1 22 0 0 0 chr5 109228580 109228602 -90401548 + AT_rich Low_complexity Low_complexity 1 22 0 783 341 91 59 chr5 109230060 109230854 -90399296 + L2 LINE L2 89 907 -2407 231 278 120 19 chr5 109230859 109230967 -90399183 + L2 LINE L2 1283 1401 -1913 629 271 24 68 chr5 109230974 109231269 -90398881 - MER90 LTR ERV1 -332 282 1 1494 344 90 12 chr5 109231269 109232150 -90398000 + L2 LINE L2 1390 2338 -976 289 310 9 3 chr5 109232239 109232358 -90397792 + LTR33 LTR ERVL 31 176 -345 609 296 184 11 chr5 109233311 109233588 -90396562 - MLT1I LTR MaLR -2 407 83 594 366 140 6 chr5 109233749 109234107 -90396043 + L2 LINE L2 2369 2774 -540 1806 175 101 28 chr5 109234175 109234570 -90395580 + MSTB LTR MaLR 1 424 -2 203 136 45 0 chr5 109235037 109235081 -90395069 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 200 240 80 0 chr5 109236098 109236148 -90394002 + MER5A DNA MER1_type 59 112 -77 2700 32 0 0 chr5 109236992 109237357 -90392793 - AluY SINE Alu 0 365 1 485 205 7 20 chr5 109237442 109237593 -90392557 + CT-rich Low_complexity Low_complexity 4 152 0 655 223 18 30 chr5 109237596 109237762 -90392388 - FRAM SINE Alu -6 170 7 21 71 0 0 chr5 109238950 109238992 -90391158 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 109239200 109239221 -90390929 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 109239392 109239413 -90390737 + AT_rich Low_complexity Low_complexity 1 21 0 1940 151 38 41 chr5 109239419 109239784 -90390366 - THE1B LTR MaLR 0 364 1 691 296 92 30 chr5 109239956 109240956 -90389194 - L1MDa LINE L1 -3639 3302 2259 376 281 0 0 chr5 109240974 109241056 -90389094 + FRAM/FAM SINE Alu 1 80 -86 2557 148 92 2 chr5 109241085 109241551 -90388599 - L1PA15 LINE L1 -16 6149 5642 259 210 65 16 chr5 109241568 109241630 -90388520 + FLAM SINE Alu 67 131 -2 1122 163 93 70 chr5 109241764 109242064 -90388086 - L1MA6 LINE L1 0 6300 5994 * 8908 195 46 17 chr5 109242049 109244205 -90385945 - L1 LINE L1 -1252 4894 2677 353 301 45 41 chr5 109244259 109244942 -90385208 - L1MDa LINE L1 -4943 1480 1168 225 286 34 46 chr5 109245559 109245734 -90384416 - L1MDa LINE L1 -6226 197 25 584 99 25 25 chr5 109245932 109246034 -90384116 + (TCTA)n Simple_repeat Simple_repeat 2 106 -16 1834 194 33 6 chr5 109246034 109246399 -90383751 + THE1C LTR MaLR 1 375 0 584 99 25 25 chr5 109246399 109246417 -90383733 + (TCTA)n Simple_repeat Simple_repeat 105 122 0 222 296 108 38 chr5 109246536 109246722 -90383428 + L2 LINE L2 2459 2657 -657 191 355 0 0 chr5 109246926 109246988 -90383162 + L2 LINE L2 2898 2959 -313 547 121 57 7 chr5 109247436 109247577 -90382573 + (ATATG)n Simple_repeat Simple_repeat 5 152 0 23 68 0 0 chr5 109247891 109247935 -90382215 + AT_rich Low_complexity Low_complexity 1 44 0 414 299 82 34 chr5 109248014 109248221 -90381929 + MIR SINE MIR 25 241 -21 191 403 24 16 chr5 109248359 109248483 -90381667 - MIR SINE MIR -136 126 2 444 326 62 56 chr5 109249062 109249366 -90380784 + MER69 DNA AcHobo 1 306 -2220 278 189 167 44 chr5 109249447 109249537 -90380613 - MER69 DNA AcHobo -1120 106 6 410 332 84 21 chr5 109249622 109249812 -90380338 - HAL1 LINE L1 -591 1916 1715 436 368 18 18 chr5 109249932 109250155 -90379995 - MIR SINE MIR -39 223 1 218 350 44 25 chr5 109251398 109251558 -90378592 - MIR SINE MIR -61 201 39 21 57 0 0 chr5 109251721 109251756 -90378394 + AT_rich Low_complexity Low_complexity 1 35 0 208 188 21 0 chr5 109252039 109252087 -90378063 + (TA)n Simple_repeat Simple_repeat 1 49 0 24 32 0 0 chr5 109253109 109253140 -90377010 + AT_rich Low_complexity Low_complexity 1 31 0 348 278 68 56 chr5 109254772 109255006 -90375144 + MIR SINE MIR 20 256 -6 183 42 0 0 chr5 109256018 109256042 -90374108 + (TATTG)n Simple_repeat Simple_repeat 5 28 0 183 42 0 0 chr5 109256086 109256110 -90374040 + (TATTG)n Simple_repeat Simple_repeat 5 28 0 30 89 0 0 chr5 109256129 109256208 -90373942 + AT_rich Low_complexity Low_complexity 1 79 0 292 288 123 37 chr5 109256345 109256508 -90373642 - MIR SINE MIR -14 248 72 699 212 0 0 chr5 109256703 109256835 -90373315 - FLAM_C SINE Alu -1 132 1 682 237 13 0 chr5 109257216 109257232 -90372918 - L1MA10 LINE L1 -2 6332 6317 3623 215 76 84 chr5 109257232 109259561 -90370589 - L1ME1 LINE L1 -9 6226 3923 3474 281 68 33 chr5 109259561 109259688 -90370462 - L1ME1 LINE L1 -4080 2316 2195 2141 104 17 3 chr5 109259688 109259985 -90370165 + AluSx SINE Alu 1 301 -11 3474 281 68 33 chr5 109259985 109260565 -90369585 - L1ME1 LINE L1 -4201 2195 1637 180 0 0 0 chr5 109260565 109260585 -90369565 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3474 281 68 33 chr5 109260585 109261746 -90368404 - L1ME1 LINE L1 -4759 1637 381 237 328 73 54 chr5 109261760 109262114 -90368036 + MER65A LTR ERV1 1 361 -84 571 263 99 13 chr5 109262219 109262451 -90367699 - L1ME1 LINE L1 -6025 371 120 26 30 0 0 chr5 109263519 109263552 -90366598 + AT_rich Low_complexity Low_complexity 1 33 0 208 192 41 27 chr5 109263600 109263673 -90366477 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 241 195 69 23 chr5 109266340 109266427 -90363723 - MER5C DNA MER1_type -52 272 182 488 262 0 16 chr5 109267121 109267247 -90362903 - MER5C DNA MER1_type -200 124 1 357 281 24 0 chr5 109268235 109268399 -90361751 + (TA)n Simple_repeat Simple_repeat 1 168 0 39 0 0 0 chr5 109268961 109269000 -90361150 + AT_rich Low_complexity Low_complexity 1 39 0 10576 35 12 5 chr5 109269000 109271063 -90359087 - L1PA4 LINE L1 -11 6144 4074 26 30 0 0 chr5 109271608 109271641 -90358509 + AT_rich Low_complexity Low_complexity 1 33 0 204 316 105 40 chr5 109271819 109271971 -90358179 + MER5A DNA MER1_type 27 188 -1 929 194 32 183 chr5 109273021 109273458 -90356692 + MER67D LTR ERV1 1 371 -143 2007 138 7 0 chr5 109273666 109273964 -90356186 - AluSx SINE Alu -12 300 1 225 359 66 28 chr5 109275640 109275746 -90354404 + MIR SINE MIR 23 132 -76 273 339 46 23 chr5 109276238 109276368 -90353782 + L2 LINE L2 3136 3268 -4 301 326 70 40 chr5 109277180 109277453 -90352697 - L2 LINE L2 -520 2794 2514 590 299 78 59 chr5 109277869 109278277 -90351873 + LTR33 LTR ERVL 60 475 -46 675 228 80 77 chr5 109278296 109278660 -90351490 - MER58D DNA MER1_type -12 374 10 32 57 0 0 chr5 109278687 109278740 -90351410 + AT_rich Low_complexity Low_complexity 1 53 0 27 29 0 0 chr5 109278796 109278830 -90351320 + AT_rich Low_complexity Low_complexity 1 34 0 243 213 200 25 chr5 109278842 109278922 -90351228 - L2 LINE L2 -10 3303 3210 23 0 0 0 chr5 109279420 109279443 -90350707 + AT_rich Low_complexity Low_complexity 1 23 0 223 288 30 0 chr5 109279482 109279548 -90350602 - MIR SINE MIR -90 172 105 207 292 0 0 chr5 109280077 109280125 -90350025 - MIR SINE MIR -121 141 94 236 300 71 0 chr5 109280213 109280283 -90349867 + MIR3 SINE MIR 124 198 -10 513 390 12 8 chr5 109280299 109280545 -90349605 - MIR SINE MIR -12 250 4 22 0 0 0 chr5 109280777 109280799 -90349351 + AT_rich Low_complexity Low_complexity 1 22 0 4471 117 28 32 chr5 109281076 109281817 -90348333 + Tigger1 DNA MER2_type 1341 2078 -340 1066 165 50 0 chr5 109281821 109282021 -90348129 + Tigger1 DNA MER2_type 2209 2418 0 354 194 20 10 chr5 109282068 109282166 -90347984 + (TA)n Simple_repeat Simple_repeat 1 99 0 980 195 19 24 chr5 109282214 109282419 -90347731 + MER2 DNA MER2_type 7 210 -135 1502 115 7 101 chr5 109282646 109282942 -90347208 + AluSx SINE Alu 1 268 -44 270 81 0 0 chr5 109282952 109282989 -90347161 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 203 133 0 0 chr5 109282989 109283019 -90347131 + (GGGGA)n Simple_repeat Simple_repeat 2 31 0 1625 254 60 36 chr5 109283216 109283719 -90346431 - MLT1E2 LTR MaLR -1 625 111 189 0 0 0 chr5 109283801 109283822 -90346328 + (T)n Simple_repeat Simple_repeat 1 21 0 24 0 0 0 chr5 109284979 109285003 -90345147 + AT_rich Low_complexity Low_complexity 1 24 0 239 91 0 23 chr5 109285157 109285201 -90344949 + (CAA)n Simple_repeat Simple_repeat 3 45 0 268 297 27 0 chr5 109285438 109285512 -90344638 - MER69 DNA AcHobo -2450 76 1 271 301 129 12 chr5 109287379 109287542 -90342608 - MIR SINE MIR -15 247 66 504 306 43 11 chr5 109287676 109287862 -90342288 + MIR SINE MIR 15 206 -56 234 62 0 0 chr5 109287867 109287899 -90342251 + (CA)n Simple_repeat Simple_repeat 2 33 0 29 47 0 0 chr5 109288343 109288386 -90341764 + AT_rich Low_complexity Low_complexity 1 43 0 252 0 0 0 chr5 109288678 109288706 -90341444 + (TTA)n Simple_repeat Simple_repeat 3 30 0 34693 68 16 4 chr5 109288706 109294151 -90335999 - L1PA5 LINE L1 -18 6136 623 279 0 0 0 chr5 109294753 109294784 -90335366 + (CA)n Simple_repeat Simple_repeat 2 32 0 2534 244 34 37 chr5 109295383 109296134 -90334016 - MER45B DNA AcHobo 0 1040 298 23 0 0 0 chr5 109296389 109296412 -90333738 + AT_rich Low_complexity Low_complexity 1 23 0 6861 63 6 10 chr5 109297488 109298723 -90331427 + L1PA5 LINE L1 4918 6153 -1 201 226 0 0 chr5 109298754 109298807 -90331343 + (TA)n Simple_repeat Simple_repeat 1 53 0 356 289 64 15 chr5 109298809 109299016 -90331134 + L1ME3A LINE L1 5448 5658 -508 207 0 0 0 chr5 109299022 109299045 -90331105 + (TA)n Simple_repeat Simple_repeat 1 23 0 1085 249 26 98 chr5 109299066 109299486 -90330664 + L1ME3A LINE L1 5662 6039 -131 832 0 0 0 chr5 109299486 109299617 -90330533 + L1PA3 LINE L1 6052 6182 0 1085 249 26 98 chr5 109299617 109299728 -90330422 + L1ME3A LINE L1 6039 6156 -14 33 0 0 0 chr5 109301826 109301859 -90328291 + AT_rich Low_complexity Low_complexity 1 33 0 371 269 57 14 chr5 109302312 109302453 -90327697 + MLT1L LTR MaLR 465 611 -4 24 53 0 0 chr5 109302523 109302561 -90327589 + AT_rich Low_complexity Low_complexity 1 38 0 627 363 12 41 chr5 109303032 109303374 -90326776 + HERVL LTR ERVL 2882 3213 -2441 7464 30 12 0 chr5 109304796 109305872 -90324278 - L1PA4 LINE L1 -3 6152 5072 17170 37 5 0 chr5 109305874 109307992 -90322158 + L1P LINE L1 2902 5030 -1116 2886 168 52 65 chr5 109308270 109308968 -90321182 - L1MA9 LINE L1 -6 6306 5618 26 64 0 0 chr5 109309289 109309336 -90320814 + AT_rich Low_complexity Low_complexity 1 47 0 601 209 0 8 chr5 109309345 109309505 -90320645 - L1M4 LINE L1 -565 5619 5466 2068 229 47 56 chr5 109309511 109310766 -90319384 - L1M4c LINE L1 -4530 2507 1406 447 75 0 151 chr5 109310887 109310980 -90319170 - MADE1 DNA Mariner 0 80 2 2162 240 41 16 chr5 109311120 109311682 -90318468 - L1MD2 LINE L1 -22 6337 5762 22 56 0 0 chr5 109315096 109315132 -90315018 + AT_rich Low_complexity Low_complexity 1 36 0 213 65 0 0 chr5 109316165 109316196 -90313954 + (TC)n Simple_repeat Simple_repeat 2 32 0 192 267 0 0 chr5 109316204 109316264 -90313886 + (TA)n Simple_repeat Simple_repeat 1 60 0 195 42 0 0 chr5 109317463 109317487 -90312663 + (CA)n Simple_repeat Simple_repeat 1 24 0 227 388 25 8 chr5 109318340 109318461 -90311689 + MIR3 SINE MIR 40 162 -46 207 160 0 40 chr5 109318678 109318728 -90311422 + (TATAA)n Simple_repeat Simple_repeat 1 48 0 23 33 0 0 chr5 109318984 109319014 -90311136 + AT_rich Low_complexity Low_complexity 1 30 0 704 229 0 0 chr5 109319786 109319943 -90310207 + MLT2B1 LTR ERVL 1 157 -363 468 0 0 0 chr5 109319963 109320015 -90310135 + (TG)n Simple_repeat Simple_repeat 2 53 0 255 91 0 68 chr5 109320018 109320062 -90310088 + MLT2C2 LTR ERVL 422 462 -2 1653 172 15 18 chr5 109320606 109320937 -90309213 - L1PA16 LINE L1 -537 5629 5300 860 111 0 37 chr5 109320936 109321071 -90309079 + L1PA16 LINE L1 5639 5768 -398 * 6803 62 18 0 chr5 109321092 109322161 -90307989 - L1PA7 LINE L1 -6 6148 5069 1742 179 57 3 chr5 109322165 109322516 -90307634 + L1PA16 LINE L1 5793 6162 -4 294 344 70 23 chr5 109323001 109323129 -90307021 + MER119 DNA MER1_type 1 134 -449 * 383 229 13 121 chr5 109323116 109323273 -90306877 + MER119 DNA MER1_type 444 583 0 286 188 0 0 chr5 109323569 109323617 -90306533 - MLT2D LTR ERVL 0 414 367 183 80 0 0 chr5 109323620 109323645 -90306505 + (TG)n Simple_repeat Simple_repeat 2 26 0 279 0 0 0 chr5 109323690 109323721 -90306429 + (GA)n Simple_repeat Simple_repeat 2 32 0 840 253 105 65 chr5 109323728 109324127 -90306023 - MLT2B1 LTR ERVL -78 442 28 1169 279 54 47 chr5 109324144 109324239 -90305911 - L1ME3A LINE L1 -125 6045 5952 4931 158 20 18 chr5 109324239 109324812 -90305338 - MER4D LTR ERV1 0 903 326 2523 62 0 3 chr5 109324812 109325119 -90305031 + AluY SINE Alu 1 306 -5 4931 158 20 18 chr5 109325119 109325446 -90304704 - MER4D LTR ERV1 -577 326 1 1169 279 54 47 chr5 109325446 109325823 -90304327 - L1ME3A LINE L1 -218 5952 5579 2608 45 0 0 chr5 109325823 109326133 -90304017 + AluY SINE Alu 1 310 -1 1169 279 54 47 chr5 109326133 109326507 -90303643 - L1ME3A LINE L1 -591 5579 5197 276 284 117 25 chr5 109326509 109326671 -90303479 + L1ME2 LINE L1 5448 5624 -540 884 259 79 32 chr5 109326710 109327026 -90303124 + L1ME2 LINE L1 5821 6151 -13 520 296 202 27 chr5 109327235 109327681 -90302469 + L1ME3A LINE L1 1860 2383 -4013 237 270 16 0 chr5 109327942 109328005 -90302145 + L1ME3 LINE L1 5931 5994 -168 865 282 68 54 chr5 109328165 109328586 -90301564 + L1ME3A LINE L1 5495 5928 -311 1844 194 58 40 chr5 109328586 109329035 -90301115 + MSTB2 LTR MaLR 1 457 0 865 282 68 54 chr5 109329035 109329202 -90300948 + L1ME3A LINE L1 5928 6091 -148 1376 143 31 0 chr5 109329273 109329496 -90300654 + MER30 DNA MER1_type 1 230 0 8467 96 14 6 chr5 109329555 109331554 -90298596 - L1PA7 LINE L1 -2 6152 4131 5515 109 7 0 chr5 109331554 109332373 -90297777 + L1P LINE L1 3247 4071 -2075 200 86 29 0 chr5 109332468 109332503 -90297647 + (CA)n Simple_repeat Simple_repeat 2 37 0 515 143 263 8 chr5 109332503 109332631 -90297519 - L1MD3 LINE L1 -13 7982 7821 1629 296 57 37 chr5 109332639 109333424 -90296726 - L1MCb LINE L1 -5242 803 3 703 285 76 4 chr5 109333444 109333711 -90296439 - L1MC3 LINE L1 -923 6862 6661 2326 152 52 2 chr5 109333898 109334305 -90295845 + MSTA LTR MaLR 2 428 0 626 325 86 35 chr5 109334585 109334979 -90295171 + LTR16A LTR ERVL 37 450 0 22 0 0 0 chr5 109335026 109335048 -90295102 + AT_rich Low_complexity Low_complexity 1 22 0 468 322 124 48 chr5 109335283 109335851 -90294299 - L2 LINE L2 -1 3312 2700 385 301 125 46 chr5 109336014 109336557 -90293593 - L1ME4a LINE L1 -46 6075 5485 264 366 84 48 chr5 109336593 109336684 -90293466 - L2 LINE L2 -555 2759 2673 2104 94 0 30 chr5 109336684 109336982 -90293168 + AluY SINE Alu 1 289 -22 264 366 84 48 chr5 109336982 109337199 -90292951 - L2 LINE L2 -641 2673 2440 433 341 15 6 chr5 109337293 109337643 -90292507 + (TG)n Simple_repeat Simple_repeat 1 353 0 484 359 94 42 chr5 109337760 109338396 -90291754 - L2 LINE L2 -1233 2081 1413 350 279 74 47 chr5 109338902 109339092 -90291058 - L2 LINE L2 -6 3307 3113 6997 204 54 21 chr5 109339171 109341023 -90289127 + L1MCa LINE L1 131 1921 -4505 2085 132 7 0 chr5 109341023 109341333 -90288817 + AluSx SINE Alu 1 312 0 6997 204 54 21 chr5 109341333 109343223 -90286927 + L1MCa LINE L1 1921 4066 -2360 228 267 33 44 chr5 109343274 109343364 -90286786 + L1MCa LINE L1 4046 4134 -2292 1951 115 59 0 chr5 109343708 109343995 -90286155 + AluSg SINE Alu 1 304 -6 22 0 0 0 chr5 109344356 109344378 -90285772 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr5 109344836 109344870 -90285280 + AT_rich Low_complexity Low_complexity 1 34 0 1804 118 56 49 chr5 109347129 109347434 -90282716 - AluSx SINE Alu -3 309 3 2666 32 0 3 chr5 109347488 109347799 -90282351 + AluYa5 SINE Alu 1 310 -1 1361 81 0 0 chr5 109347799 109347972 -90282178 + AluY SINE Alu 133 305 -6 23 0 0 0 chr5 109348922 109348945 -90281205 + AT_rich Low_complexity Low_complexity 1 23 0 2028 125 0 7 chr5 109349239 109349528 -90280622 + AluSx SINE Alu 1 287 -25 186 43 0 0 chr5 109349531 109349554 -90280596 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1751 155 48 10 chr5 109349791 109350101 -90280049 + THE1B LTR MaLR 1 322 -42 223 253 12 36 chr5 109350384 109350467 -90279683 + A-rich Low_complexity Low_complexity 4 84 0 23 0 0 0 chr5 109350953 109350976 -90279174 + AT_rich Low_complexity Low_complexity 1 23 0 207 308 55 0 chr5 109351063 109351154 -90278996 - L2 LINE L2 0 3272 3177 1705 188 50 0 chr5 109351431 109351772 -90278378 + MER47A DNA MER2_type 8 365 -1 434 159 26 9 chr5 109352353 109352466 -90277684 + (TA)n Simple_repeat Simple_repeat 1 115 0 1897 181 48 12 chr5 109352486 109352915 -90277235 - MLT2D LTR ERVL -20 444 1 206 234 102 88 chr5 109353197 109353334 -90276816 + MIR SINE MIR 102 240 -22 32 86 0 0 chr5 109354502 109354583 -90275567 + AT_rich Low_complexity Low_complexity 1 81 0 328 293 47 0 chr5 109356118 109356224 -90273926 - MLT1B LTR MaLR -87 303 193 757 208 57 10 chr5 109356272 109356464 -90273686 - MLT1B LTR MaLR -189 201 1 1720 245 22 24 chr5 109356464 109356881 -90273269 - MLT1B-int LTR MaLR -2 1369 954 2187 182 34 57 chr5 109357132 109357805 -90272345 - MLT1B-int LTR MaLR -491 880 21 1456 212 63 17 chr5 109357949 109358298 -90271852 - MLT2D LTR ERVL -48 366 2 599 112 10 0 chr5 109361099 109361197 -90268953 + (GGAA)n Simple_repeat Simple_repeat 3 101 0 1298 255 35 21 chr5 109361294 109361670 -90268480 + LTR40b LTR ERVL 48 428 -34 1310 286 79 7 chr5 109361672 109362113 -90268037 + L1MDa LINE L1 168 640 -5900 2144 145 26 21 chr5 109362122 109362502 -90267648 - Tigger2 DNA MER2_type -605 2113 1732 * 5514 135 31 24 chr5 109362489 109363434 -90266716 - Tigger2 DNA MER2_type -1232 1486 536 4001 146 39 22 chr5 109366199 109366924 -90263226 + Tigger1 DNA MER2_type 521 1257 -1161 1476 183 69 14 chr5 109366924 109367213 -90262937 - AluJb SINE Alu -7 305 1 3888 94 20 11 chr5 109367236 109367845 -90262305 - L1PA7 LINE L1 -2 6152 5539 238 146 18 18 chr5 109368323 109368378 -90261772 + GA-rich Low_complexity Low_complexity 3 57 0 214 329 0 12 chr5 109369449 109369531 -90260619 - L2 LINE L2 -5 3308 3228 267 122 0 0 chr5 109370065 109370114 -90260036 + (A)n Simple_repeat Simple_repeat 1 49 0 5551 237 28 40 chr5 109370423 109372228 -90257922 - L1P LINE L1 -2014 4132 2350 200 123 92 31 chr5 109373239 109373304 -90256846 + (ATATG)n Simple_repeat Simple_repeat 4 72 0 280 302 123 22 chr5 109374392 109374571 -90255579 - Charlie8 DNA MER1_type -2136 281 85 2059 106 14 0 chr5 109375591 109375716 -90254434 + AluY SINE Alu 1 123 -188 243 0 0 0 chr5 109375716 109375743 -90254407 + (CA)n Simple_repeat Simple_repeat 2 28 0 2059 106 14 0 chr5 109375743 109375909 -90254241 + AluY SINE Alu 123 296 -15 597 294 76 5 chr5 109377162 109377373 -90252777 - MIR SINE MIR -8 254 29 205 239 0 0 chr5 109377652 109377698 -90252452 - L2 LINE L2 -10 3303 3258 5571 113 55 32 chr5 109378415 109379387 -90250763 - THE1A-int LTR MaLR -586 994 1 2221 128 11 3 chr5 109379387 109379739 -90250411 - THE1A LTR MaLR 0 355 1 671 333 5 0 chr5 109380564 109380762 -90249388 + L2 LINE L2 2462 2660 -654 261 298 24 65 chr5 109381545 109381669 -90248481 + MIR SINE MIR 73 191 -71 486 271 60 83 chr5 109382593 109382811 -90247339 + MIR SINE MIR 37 249 -13 1809 94 0 123 chr5 109383492 109383834 -90246316 + AluSg SINE Alu 1 300 -10 459 110 41 0 chr5 109383990 109384063 -90246087 + MER51B LTR ERV1 302 377 0 267 380 47 56 chr5 109386751 109386985 -90243165 + L2 LINE L2 2242 2473 -841 22 0 0 0 chr5 109387237 109387259 -90242891 + AT_rich Low_complexity Low_complexity 1 22 0 328 313 20 0 chr5 109387298 109387397 -90242753 - MIR SINE MIR -63 145 45 238 289 79 0 chr5 109387557 109387633 -90242517 - L2 LINE L2 0 3313 3232 1522 155 42 3 chr5 109388582 109388866 -90241284 - L1PA15 LINE L1 -229 5936 5642 259 185 72 18 chr5 109388883 109388945 -90241205 + FLAM_A SINE Alu 66 123 -10 5938 193 30 19 chr5 109389500 109390886 -90239264 - L1 LINE L1 -1282 4864 3465 243 0 0 0 chr5 109391128 109391155 -90238995 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 2452 111 20 0 chr5 109391155 109391508 -90238642 + MER41A LTR ERV1 195 554 0 1542 204 11 0 chr5 109392762 109393047 -90237103 + AluJo SINE Alu 1 288 -24 476 407 26 3 chr5 109393608 109393913 -90236237 + MERVL LTR ERVL 1238 1549 -3447 383 318 16 0 chr5 109393945 109394074 -90236076 + MERVL LTR ERVL 1659 1789 -3207 319 351 32 27 chr5 109394325 109394510 -90235640 + MERVL LTR ERVL 3295 3480 -2005 983 319 31 17 chr5 109394905 109395259 -90234891 + LTR16A LTR ERVL 73 431 -19 2276 68 0 39 chr5 109395927 109396260 -90233890 + AluY SINE Alu 1 311 0 3520 179 36 13 chr5 109398179 109398895 -90231255 - Tigger1 DNA MER2_type -1685 733 1 22 56 0 0 chr5 109399248 109399284 -90230866 + AT_rich Low_complexity Low_complexity 1 36 0 1059 209 53 13 chr5 109401203 109401428 -90228722 - MLT1A1 LTR MaLR -131 234 1 8309 190 13 9 chr5 109401585 109404083 -90226067 + L1PBa LINE L1 1101 3846 -3016 3052 193 17 35 chr5 109404387 109404989 -90225161 + MER52A LTR ERV1 1165 1755 0 310 258 96 60 chr5 109405062 109405229 -90224921 - L2 LINE L2 -4 3309 3137 1267 237 35 77 chr5 109405420 109405969 -90224181 + MER39 LTR ERV1 1 707 0 24 32 0 0 chr5 109406353 109406384 -90223766 + AT_rich Low_complexity Low_complexity 1 31 0 225 257 119 9 chr5 109411571 109411680 -90218470 - L1ME4a LINE L1 -3 6118 5998 22 0 0 0 chr5 109411782 109411804 -90218346 + AT_rich Low_complexity Low_complexity 1 22 0 474 88 0 0 chr5 109411804 109411872 -90218278 + (TTCC)n Simple_repeat Simple_repeat 1 68 0 370 294 74 74 chr5 109412872 109413171 -90216979 + MLT1I LTR MaLR 79 377 -32 32 43 0 0 chr5 109413304 109413350 -90216800 + AT_rich Low_complexity Low_complexity 1 46 0 625 339 149 36 chr5 109413464 109414235 -90215915 + L2 LINE L2 374 1231 -2083 697 289 113 30 chr5 109414413 109414776 -90215374 + L2 LINE L2 2921 3313 0 2288 78 0 0 chr5 109415089 109415409 -90214741 + AluY SINE Alu 1 320 0 1215 163 58 33 chr5 109418656 109418893 -90211257 - L1MA6 LINE L1 0 6300 6054 2012 144 60 8 chr5 109418893 109419246 -90210904 + THE1C LTR MaLR 1 371 -4 1215 163 58 33 chr5 109419246 109419284 -90210866 - L1MA6 LINE L1 -246 6054 6018 180 0 0 0 chr5 109419324 109419344 -90210806 + (A)n Simple_repeat Simple_repeat 1 20 0 416 272 184 0 chr5 109419398 109419545 -90210605 - MER5A DNA MER1_type -7 182 9 772 366 37 21 chr5 109420503 109420702 -90209448 + ERVL LTR ERVL 3314 3508 -2256 1391 252 37 3 chr5 109420702 109421051 -90209099 - MLT1A1 LTR MaLR -4 361 1 772 366 37 21 chr5 109421051 109421368 -90208782 + ERVL LTR ERVL 3508 3838 -1926 791 345 70 33 chr5 109421535 109421984 -90208166 + ERVL LTR ERVL 4055 4541 -1223 192 40 0 0 chr5 109421984 109422009 -90208141 + (TTG)n Simple_repeat Simple_repeat 2 26 0 791 345 70 33 chr5 109422009 109422255 -90207895 + ERVL LTR ERVL 4541 4776 -988 832 336 54 20 chr5 109422281 109422728 -90207422 + ERVL LTR ERVL 4821 5282 -482 481 320 86 34 chr5 109423172 109423441 -90206709 + LTR16C LTR ERVL 209 491 0 992 113 34 99 chr5 109425096 109425388 -90204762 + AluSx SINE Alu 1 273 -39 1061 133 0 22 chr5 109425414 109425595 -90204555 + AluSp SINE Alu 128 304 -9 958 203 9 35 chr5 109425635 109425669 -90204481 - MER58A DNA MER1_type -2197 223 190 222 62 0 0 chr5 109425669 109425701 -90204449 + (TTGTG)n Simple_repeat Simple_repeat 2 33 0 1858 138 6 47 chr5 109425707 109426026 -90204124 - AluSx SINE Alu -4 308 3 958 203 9 35 chr5 109426026 109426211 -90203939 - MER58A DNA MER1_type -2235 185 3 2205 106 0 3 chr5 109426261 109426553 -90203597 + AluSx SINE Alu 1 291 -21 2254 107 0 7 chr5 109426695 109426995 -90203155 + AluSx SINE Alu 2 299 -13 2015 89 0 3 chr5 109426995 109427307 -90202843 + AluY SINE Alu 1 311 0 2418 152 23 0 chr5 109428408 109428796 -90201354 + MSTB1 LTR MaLR 1 397 -35 284 219 18 35 chr5 109429362 109429438 -90200712 + CT-rich Low_complexity Low_complexity 2 77 -36 1641 176 3 42 chr5 109429438 109429750 -90200400 - AluJb SINE Alu -12 300 1 284 219 18 35 chr5 109429750 109429787 -90200363 + CT-rich Low_complexity Low_complexity 77 113 0 2140 103 10 3 chr5 109433111 109433403 -90196747 - AluSp SINE Alu -19 294 1 1893 114 0 56 chr5 109433406 109433712 -90196438 - AluSx SINE Alu -22 290 2 807 143 0 21 chr5 109433712 109433852 -90196298 - AluSq/x SINE Alu -175 138 2 238 237 21 32 chr5 109435693 109435786 -90194364 + (TA)n Simple_repeat Simple_repeat 1 92 0 29 60 0 0 chr5 109436485 109436535 -90193615 + AT_rich Low_complexity Low_complexity 1 50 0 1622 132 0 118 chr5 109437064 109437404 -90192746 + AluSx SINE Alu 3 302 0 198 0 0 0 chr5 109437893 109437915 -90192235 + (CA)n Simple_repeat Simple_repeat 2 23 0 27 29 0 0 chr5 109438130 109438164 -90191986 + AT_rich Low_complexity Low_complexity 1 34 0 253 110 113 21 chr5 109438730 109438798 -90191352 - MLT1A2 LTR MaLR 0 374 297 7803 70 5 5 chr5 109439311 109440318 -90189832 - LTR13 LTR ERVK 0 1007 1 1840 110 44 0 chr5 109441003 109441275 -90188875 + AluY SINE Alu 14 297 -14 218 337 93 19 chr5 109443677 109443882 -90186268 - L2 LINE L2 -434 2880 2661 344 299 40 62 chr5 109444244 109444362 -90185788 - MER5B DNA MER1_type 0 178 64 180 0 0 0 chr5 109444362 109444382 -90185768 + (ATTTG)n Simple_repeat Simple_repeat 1 20 0 344 299 40 62 chr5 109444382 109444440 -90185710 - MER5B DNA MER1_type -114 64 6 7685 24 0 4 chr5 109444636 109445950 -90184200 + L1PA3 LINE L1 4927 6236 0 280 353 29 17 chr5 109446014 109446187 -90183963 + L2 LINE L2 2196 2370 -944 211 281 62 0 chr5 109446789 109446853 -90183297 + MIR SINE MIR 104 171 -91 4175 210 135 8 chr5 109447070 109448240 -90181910 - L1PA15-16 LINE L1 -4393 3191 1782 372 332 72 45 chr5 109448450 109448715 -90181435 - L1M2 LINE L1 -5782 1067 796 363 270 10 10 chr5 109448763 109448863 -90181287 - L1PA15-16 LINE L1 -7476 105 6 428 256 69 44 chr5 109449321 109449481 -90180669 + MLT1G LTR MaLR 427 590 0 1981 143 26 34 chr5 109449827 109450205 -90179945 + THE1C LTR MaLR 1 375 0 1984 128 61 19 chr5 109450563 109450923 -90179227 - THE1C LTR MaLR 0 375 1 1172 263 37 13 chr5 109451034 109451411 -90178739 + MLT1B LTR MaLR 1 386 -4 705 318 38 62 chr5 109451496 109452157 -90177993 + L1MEc LINE L1 77 721 -5675 347 294 68 62 chr5 109452363 109453073 -90177077 + L1MEc LINE L1 1033 1746 -4650 1846 211 32 53 chr5 109453075 109453111 -90177039 - MLT2C2 LTR ERVL -6 458 423 360 103 0 0 chr5 109453111 109453169 -90176981 + (CA)n Simple_repeat Simple_repeat 2 59 0 1846 211 32 53 chr5 109453169 109453282 -90176868 - MLT2C2 LTR ERVL -41 423 309 2463 63 0 0 chr5 109453282 109453582 -90176568 + AluY SINE Alu 1 300 -11 1846 211 32 53 chr5 109453582 109453899 -90176251 - MLT2C2 LTR ERVL -155 309 1 837 282 98 42 chr5 109454123 109455200 -90174950 + L1MEc LINE L1 1974 3070 -3145 1927 195 10 13 chr5 109455315 109455710 -90174440 - Tigger2 DNA MER2_type -2324 394 1 372 362 91 46 chr5 109455780 109456241 -90173909 + L2 LINE L2 2149 2630 -684 193 356 89 11 chr5 109456492 109456582 -90173568 + L2 LINE L2 2985 3081 -191 244 337 61 0 chr5 109456691 109456789 -90173361 + L2 LINE L2 3169 3272 0 496 255 139 82 chr5 109457317 109457756 -90172394 - LTR16B LTR ERVL 0 464 1 36 70 0 0 chr5 109458086 109458157 -90171993 + AT_rich Low_complexity Low_complexity 1 71 0 254 146 83 0 chr5 109458243 109458291 -90171859 - MADE1 DNA Mariner 0 80 29 192 353 88 7 chr5 109458346 109458482 -90171668 + MIR SINE MIR 102 248 -14 637 219 19 13 chr5 109459774 109459929 -90170221 - L1MB1 LINE L1 0 6168 6013 181 333 0 16 chr5 109461464 109461527 -90168623 - MER5B DNA MER1_type -6 172 111 405 0 0 0 chr5 109461582 109461627 -90168523 + (CAA)n Simple_repeat Simple_repeat 1 45 0 2004 258 21 21 chr5 109461654 109462174 -90167976 - MLT1E2 LTR MaLR -106 520 1 399 281 175 12 chr5 109463201 109463361 -90166789 - MER5A DNA MER1_type 0 189 4 22 0 0 0 chr5 109463366 109463388 -90166762 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 109463520 109463544 -90166606 + AT_rich Low_complexity Low_complexity 1 24 0 211 281 132 66 chr5 109463549 109463670 -90166480 - MIR3 SINE MIR -78 130 2 290 294 0 33 chr5 109465296 109465388 -90164762 + MIR3 SINE MIR 88 176 -32 321 308 98 28 chr5 109465455 109465669 -90164481 + L2 LINE L2 3077 3305 -8 637 235 0 15 chr5 109465672 109465804 -90164346 + FLAM_C SINE Alu 1 130 -3 2796 85 24 132 chr5 109465820 109466328 -90163822 - MLT2A2 LTR ERVL 0 453 1 663 165 18 0 chr5 109466360 109466469 -90163681 + FRAM SINE Alu 54 164 -12 26 82 0 0 chr5 109466469 109466530 -90163620 + AT_rich Low_complexity Low_complexity 1 61 0 21 82 0 0 chr5 109467682 109467731 -90162419 + AT_rich Low_complexity Low_complexity 1 49 0 1638 253 203 12 chr5 109467821 109468319 -90161831 + MLT1E LTR MaLR 1 593 0 626 280 104 4 chr5 109468447 109468715 -90161435 - L1ME1 LINE L1 -9 6157 5863 495 48 0 0 chr5 109468716 109468778 -90161372 + (TAG)n Simple_repeat Simple_repeat 1 62 0 2730 96 10 5 chr5 109468794 109469181 -90160969 + MLT2A1 LTR ERVL 1 389 -55 339 140 0 0 chr5 109469181 109469231 -90160919 + HERVL-A1 LTR ERVL 1785 1834 -3820 17684 80 16 0 chr5 109469253 109471531 -90158619 + HERVL-A1 LTR ERVL 1779 4093 -1561 721 87 0 0 chr5 109471537 109471640 -90158510 + HERVL-A1 LTR ERVL 5552 5654 0 2914 74 74 2 chr5 109471640 109472047 -90158103 + MLT2A1 LTR ERVL 1 436 -8 1611 196 0 0 chr5 109472048 109472323 -90157827 - AluJo SINE Alu -33 279 5 668 244 87 12 chr5 109472328 109472570 -90157580 - L1ME1 LINE L1 -297 5869 5610 723 225 112 0 chr5 109472636 109472805 -90157345 + MLT1E1 LTR MaLR 466 653 -1 322 270 10 95 chr5 109472992 109473192 -90156958 - L1MCc LINE L1 -5592 831 649 1310 321 82 16 chr5 109473206 109473841 -90156309 - L1MCc LINE L1 -5728 695 19 243 0 0 0 chr5 109474103 109474130 -90156020 + (CA)n Simple_repeat Simple_repeat 2 28 0 492 261 133 60 chr5 109475513 109475731 -90154419 - MIR SINE MIR 0 262 29 204 254 16 0 chr5 109477202 109477265 -90152885 + T-rich Low_complexity Low_complexity 6 69 0 26 0 0 0 chr5 109477996 109478022 -90152128 + AT_rich Low_complexity Low_complexity 1 26 0 1163 322 201 14 chr5 109529172 109530280 -90099870 - L2 LINE L2 -1462 1852 537 432 301 137 23 chr5 109530285 109530547 -90099603 - L2 LINE L2 -2959 355 64 13681 60 6 1 chr5 109530675 109532470 -90097680 - L1PA5 LINE L1 -3166 2980 1178 18991 55 0 0 chr5 109532470 109535650 -90094500 + L1PA5 LINE L1 2966 6146 -8 30 45 0 0 chr5 109535650 109535694 -90094456 + AT_rich Low_complexity Low_complexity 1 44 0 450 53 0 0 chr5 109535922 109535979 -90094171 + (CA)n Simple_repeat Simple_repeat 2 58 0 1709 193 10 6 chr5 109537697 109538008 -90092142 - MER7A DNA MER2_type 0 346 37 209 300 22 0 chr5 109538162 109538252 -90091898 + (TAA)n Simple_repeat Simple_repeat 2 93 0 23 0 0 0 chr5 109538619 109538642 -90091508 + AT_rich Low_complexity Low_complexity 1 23 0 786 286 72 3 chr5 109539788 109540078 -90090072 - MLT1I LTR MaLR -3 406 97 369 0 0 0 chr5 109540122 109540163 -90089987 + (TG)n Simple_repeat Simple_repeat 2 42 0 5294 155 36 13 chr5 109540338 109541590 -90088560 + L1PA16 LINE L1 4879 6157 -9 699 334 58 15 chr5 109541605 109541931 -90088219 + L2 LINE L2 1807 2146 -1168 229 278 159 20 chr5 109541990 109542141 -90088009 - LTR33 LTR ERVL -58 463 292 796 211 163 13 chr5 109542148 109542375 -90087775 - MER63 DNA MER1_type 0 1060 800 1423 313 60 51 chr5 109542602 109543132 -90087018 + L2 LINE L2 2179 2703 -610 2528 232 40 15 chr5 109543132 109543739 -90086411 + MLT1E3 LTR MaLR 3 624 0 1423 313 60 51 chr5 109543739 109544301 -90085849 + L2 LINE L2 2703 3283 -30 22 70 0 0 chr5 109544986 109545029 -90085121 + AT_rich Low_complexity Low_complexity 1 43 0 2079 112 14 0 chr5 109545052 109545347 -90084803 + AluSc SINE Alu 1 299 -10 186 288 137 75 chr5 109545891 109546037 -90084113 + MIR3 SINE MIR 3 157 -51 242 317 16 32 chr5 109547366 109547489 -90082661 - MER20B DNA MER1_type -605 178 58 269 321 43 14 chr5 109547680 109547820 -90082330 + L2 LINE L2 2982 3125 -188 899 220 175 41 chr5 109548195 109548509 -90081641 + MSTB2 LTR MaLR 42 397 -60 6021 174 17 14 chr5 109548521 109550508 -90079642 + L1MA1 LINE L1 425 2405 -5316 2020 145 3 0 chr5 109550508 109550811 -90079339 + AluSp SINE Alu 5 308 -5 6021 174 17 14 chr5 109550811 109553217 -90076933 + L1MA1 LINE L1 2405 4803 -2918 1971 160 0 3 chr5 109553217 109553523 -90076627 + AluSx SINE Alu 1 305 -7 6021 174 17 14 chr5 109553523 109556277 -90073873 + L1MA1 LINE L1 4803 7721 0 1399 217 10 10 chr5 109556289 109556593 -90073557 + MSTB2-int LTR MaLR 1334 1637 -14 1370 224 85 42 chr5 109556609 109557034 -90073116 + MSTB2 LTR MaLR 15 457 0 21 0 0 0 chr5 109557280 109557301 -90072849 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 109557698 109557733 -90072417 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 109557826 109557848 -90072302 + AT_rich Low_complexity Low_complexity 1 22 0 262 253 141 0 chr5 109559579 109559678 -90070472 - MIR SINE MIR -86 176 64 288 154 0 0 chr5 109561172 109561224 -90068926 + (TA)n Simple_repeat Simple_repeat 2 53 0 303 277 101 13 chr5 109561914 109562073 -90068077 - Charlie7 DNA MER1_type 0 2612 2440 192 349 115 32 chr5 109565734 109565952 -90064198 + MIR SINE MIR 4 239 -23 2413 57 0 3 chr5 109566002 109566298 -90063852 + AluY SINE Alu 1 295 -16 22 35 0 0 chr5 109567469 109567498 -90062652 + AT_rich Low_complexity Low_complexity 1 29 0 379 198 245 0 chr5 109567842 109567948 -90062202 + MIR SINE MIR 98 229 -33 24 0 0 0 chr5 109570177 109570201 -90059949 + AT_rich Low_complexity Low_complexity 1 24 0 4511 123 9 1 chr5 109572617 109573306 -90056844 + L1PA16 LINE L1 5464 6157 -9 1090 198 30 25 chr5 109573758 109573995 -90056155 + AluJo SINE Alu 2 239 -73 219 275 0 38 chr5 109574989 109575069 -90055081 - MIR SINE MIR 0 262 186 289 300 62 6 chr5 109575097 109575257 -90054893 - L1M4b LINE L1 -4320 2818 2650 21 0 0 0 chr5 109575265 109575286 -90054864 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr5 109575531 109575570 -90054580 + AT_rich Low_complexity Low_complexity 1 39 0 1630 268 55 62 chr5 109575605 109575741 -90054409 - L1M4b LINE L1 -4543 2416 2281 1606 224 70 0 chr5 109575741 109576111 -90054039 - MSTD LTR MaLR 0 396 1 1630 268 55 62 chr5 109576111 109576786 -90053364 - L1M4b LINE L1 -4678 2281 1603 207 0 0 0 chr5 109576786 109576809 -90053341 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 2284 76 6 38 chr5 109576810 109577152 -90052998 - L1PA7 LINE L1 -11 6143 5813 3064 147 14 8 chr5 109577158 109577662 -90052488 - L1PA16 LINE L1 -10 6156 5650 1630 268 55 62 chr5 109577662 109578049 -90052101 - L1M4b LINE L1 -5361 1598 1205 2712 293 45 34 chr5 109578467 109579382 -90050768 - L1M4b LINE L1 -5923 936 12 201 338 28 41 chr5 109580534 109580679 -90049471 + MIR SINE MIR 26 168 -94 268 219 48 9 chr5 109580850 109580955 -90049195 + (TA)n Simple_repeat Simple_repeat 1 109 0 264 267 120 26 chr5 109580995 109581186 -90048964 + L1ME2 LINE L1 4907 5115 -1031 395 177 2 62 chr5 109581211 109581309 -90048841 + AluJ/FLAM SINE Alu 2 73 -229 516 282 78 16 chr5 109581309 109581554 -90048596 + L1ME2 LINE L1 5752 6011 -153 623 193 21 0 chr5 109581569 109581709 -90048441 + L1MA10 LINE L1 6175 6317 -17 1707 139 20 0 chr5 109581890 109582142 -90048008 + AluSq SINE Alu 1 257 -56 189 74 0 0 chr5 109582596 109582623 -90047527 + (TATAA)n Simple_repeat Simple_repeat 5 31 0 5385 230 28 63 chr5 109583688 109585881 -90044269 + L1P3 LINE L1 22 2142 -4319 2353 119 0 0 chr5 109585881 109586193 -90043957 + AluSx SINE Alu 1 312 0 5385 230 28 63 chr5 109586193 109586536 -90043614 + L1P3 LINE L1 2142 2495 -3966 461 318 141 58 chr5 109587066 109587568 -90042582 - L2 LINE L2 -2 3311 2852 2322 80 0 3 chr5 109587568 109587857 -90042293 + AluY SINE Alu 1 288 -23 461 318 141 58 chr5 109587857 109588240 -90041910 - L2 LINE L2 -461 2852 2343 290 363 18 9 chr5 109588939 109589052 -90041098 - HERV16 LTR ERVL -1979 3017 2904 186 174 55 0 chr5 109589115 109589224 -90040926 + (TA)n Simple_repeat Simple_repeat 1 115 0 405 0 0 0 chr5 109589230 109589275 -90040875 + (CA)n Simple_repeat Simple_repeat 2 46 0 344 174 105 23 chr5 109589304 109589390 -90040760 - L1MA9 LINE L1 -45 6267 6175 * 2557 174 9 57 chr5 109589370 109589916 -90040234 + L1MA9 LINE L1 5609 6128 -184 2512 89 6 0 chr5 109589916 109590274 -90039876 + L1PA13 LINE L1 5801 6161 -2 925 281 143 45 chr5 109590435 109591807 -90038343 - L1MEc LINE L1 -2102 4113 2558 363 44 0 0 chr5 109591807 109591852 -90038298 + (CA)n Simple_repeat Simple_repeat 2 46 0 925 281 143 45 chr5 109591852 109592095 -90038055 - L1MEc LINE L1 -3657 2558 2340 337 329 127 17 chr5 109592132 109592369 -90037781 - L1MEc LINE L1 -4102 2294 2032 398 245 11 11 chr5 109592436 109592530 -90037620 + MER5A DNA MER1_type 13 106 -83 2291 126 0 0 chr5 109592666 109592975 -90037175 - AluSx SINE Alu -2 310 2 21 36 0 0 chr5 109594211 109594239 -90035911 + AT_rich Low_complexity Low_complexity 1 28 0 192 311 0 0 chr5 109594667 109594728 -90035422 - L2 LINE L2 -1049 2265 2205 712 162 23 6 chr5 109594804 109594977 -90035173 + CT-rich Low_complexity Low_complexity 3 178 0 355 239 0 38 chr5 109594997 109595181 -90034969 + CT-rich Low_complexity Low_complexity 2 178 0 417 20 0 0 chr5 109595403 109595453 -90034697 + (TG)n Simple_repeat Simple_repeat 2 51 0 188 353 26 39 chr5 109596708 109596861 -90033289 + MER5A DNA MER1_type 39 189 0 9697 204 55 29 chr5 109599808 109600485 -90029665 - L1MC3 LINE L1 -9 8170 7512 1712 176 0 29 chr5 109600485 109600792 -90029358 - AluJb SINE Alu -14 298 1 9697 204 55 29 chr5 109600792 109600916 -90029234 - L1MC3 LINE L1 -667 7512 7393 207 0 0 0 chr5 109600916 109600939 -90029211 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 9697 204 55 29 chr5 109600939 109603250 -90026900 - L1MC3 LINE L1 -786 7393 4964 1197 163 13 73 chr5 109603266 109603499 -90026651 + AluJo SINE Alu 14 232 -80 1611 144 33 49 chr5 109603502 109603807 -90026343 + MER1B DNA MER1_type 1 300 -39 1034 176 0 0 chr5 109603853 109604029 -90026121 - AluSg/x SINE Alu 0 310 135 787 278 34 18 chr5 109604029 109604410 -90025740 - L1MC3 LINE L1 -1654 4886 4500 4877 122 38 63 chr5 109605968 109607405 -90022745 - pTR5 LTR ERV1 0 2438 67 641 256 51 107 chr5 109607737 109607934 -90022216 - MER58B DNA MER1_type -2083 337 167 2365 57 10 10 chr5 109607934 109608232 -90021918 - AluY SINE Alu -13 298 1 641 256 51 107 chr5 109608232 109608390 -90021760 - MER58B DNA MER1_type -2253 167 2 1649 189 88 117 chr5 109608454 109609277 -90020873 - L1MC3 LINE L1 -3939 2601 1810 2193 123 3 0 chr5 109609277 109609587 -90020563 - AluSx SINE Alu 0 312 2 1649 189 88 117 chr5 109609587 109609745 -90020405 - L1MC3 LINE L1 -4730 1810 1649 3505 116 47 2 chr5 109609745 109610282 -90019868 + L1PA11 LINE L1 5607 6167 -7 355 167 179 0 chr5 109610312 109610390 -90019760 - MLT1G LTR MaLR -21 569 478 24 0 0 0 chr5 109610391 109610415 -90019735 + AT_rich Low_complexity Low_complexity 1 24 0 798 198 281 27 chr5 109610415 109610820 -90019330 - L1MC3 LINE L1 -4879 1661 1154 2028 186 26 11 chr5 109610827 109611345 -90018805 + Tigger1 DNA MER2_type 24 606 -1812 189 0 0 0 chr5 109611345 109611366 -90018784 + (TA)n Simple_repeat Simple_repeat 2 22 0 2028 186 26 11 chr5 109611366 109611649 -90018501 + Tigger1 DNA MER2_type 606 883 -1535 5598 220 38 15 chr5 109611653 109612551 -90017599 - MSTB-int LTR MaLR -160 1575 499 3127 167 59 63 chr5 109612551 109613281 -90016869 + LTR8A LTR ERV1 1 727 0 5598 220 38 15 chr5 109613281 109613792 -90016358 - MSTB-int LTR MaLR -1236 499 1 2052 181 82 0 chr5 109613792 109614184 -90015966 - MSTB LTR MaLR -2 424 1 5015 143 30 2 chr5 109614185 109615019 -90015131 + Tigger1 DNA MER2_type 1160 2016 -402 1072 166 25 0 chr5 109615101 109615300 -90014850 + Tigger1 DNA MER2_type 2215 2418 0 202 54 27 27 chr5 109615360 109615397 -90014753 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1096 308 106 41 chr5 109615399 109616104 -90014046 - L1MC3 LINE L1 -5569 971 221 918 130 125 5 chr5 109616093 109616285 -90013865 + L1MA5A LINE L1 6083 6297 0 * 262 257 0 14 chr5 109616491 109616561 -90013589 + (TA)n Simple_repeat Simple_repeat 1 69 0 25 51 0 0 chr5 109616690 109616729 -90013421 + AT_rich Low_complexity Low_complexity 1 39 0 23 68 0 0 chr5 109617227 109617271 -90012879 + AT_rich Low_complexity Low_complexity 1 44 0 194 289 108 12 chr5 109617328 109617411 -90012739 - MIR SINE MIR -156 106 16 1291 213 79 99 chr5 109618220 109618765 -90011385 + MLT1E1 LTR MaLR 121 654 0 180 0 0 0 chr5 109619502 109619522 -90010628 + (TA)n Simple_repeat Simple_repeat 2 21 0 26 0 0 0 chr5 109620077 109620103 -90010047 + AT_rich Low_complexity Low_complexity 1 26 0 833 125 59 13 chr5 109620211 109620363 -90009787 - L1MA6 LINE L1 0 6300 6142 356 256 78 47 chr5 109620993 109621122 -90009028 - MLT1K LTR MaLR -454 134 2 200 266 0 47 chr5 109622381 109622445 -90007705 + CT-rich Low_complexity Low_complexity 1 61 0 186 103 0 0 chr5 109622805 109622834 -90007316 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr5 109622928 109622949 -90007201 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 109623959 109623994 -90006156 + AT_rich Low_complexity Low_complexity 1 35 0 2377 57 0 0 chr5 109624501 109624823 -90005327 - AluY SINE Alu 0 322 1 409 340 102 22 chr5 109625037 109625449 -90004701 + LTR16A1 LTR ERVL 4 448 -9 306 138 0 0 chr5 109625911 109625969 -90004181 + (TG)n Simple_repeat Simple_repeat 2 59 0 1248 137 201 8 chr5 109626976 109627210 -90002940 - AluSg1 SINE Alu -30 279 1 2334 94 3 0 chr5 109630462 109630771 -89999379 + AluSg SINE Alu 1 310 0 348 291 176 55 chr5 109630806 109631095 -89999055 + MLT1K LTR MaLR 111 434 -154 231 36 0 0 chr5 109633551 109633579 -89996571 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 45 34 0 0 chr5 109633629 109633688 -89996462 + AT_rich Low_complexity Low_complexity 1 59 0 505 218 8 8 chr5 109634101 109634225 -89995925 - L1MB8 LINE L1 -222 5956 5833 1804 271 121 12 chr5 109634236 109635091 -89995059 - L1 LINE L1 -2373 3773 2826 1183 210 25 12 chr5 109635083 109635326 -89994824 - L1M4b LINE L1 -5738 1121 876 * 1662 300 36 25 chr5 109635424 109636137 -89994013 - L1M4b LINE L1 -5987 872 14 27 29 0 0 chr5 109636261 109636295 -89993855 + AT_rich Low_complexity Low_complexity 1 34 0 543 332 128 31 chr5 109636441 109636887 -89993263 - L2 LINE L2 -5 3308 2820 1014 213 20 4 chr5 109637658 109637912 -89992238 + L1MD3 LINE L1 7730 7987 -8 1858 149 0 0 chr5 109638095 109638401 -89991749 - AluSx SINE Alu 0 306 1 22 35 0 0 chr5 109640091 109640120 -89990030 + AT_rich Low_complexity Low_complexity 1 29 0 404 304 50 48 chr5 109640178 109640500 -89989650 + L3 LINE CR1 1048 1412 -165 200 200 0 0 chr5 109640510 109640545 -89989605 + (CATA)n Simple_repeat Simple_repeat 3 37 0 2005 299 36 11 chr5 109640922 109641701 -89988449 + ERVL LTR ERVL 1762 2550 -2935 729 339 44 39 chr5 109641727 109642117 -89988033 + ERVL LTR ERVL 2639 3032 -2624 396 298 79 36 chr5 109642383 109642648 -89987502 + ERVL LTR ERVL 3393 3636 -2018 456 339 70 13 chr5 109642703 109643159 -89986991 + ERVL LTR ERVL 3734 4223 -1262 240 86 0 0 chr5 109643159 109643194 -89986956 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 456 339 70 13 chr5 109643194 109643235 -89986915 + ERVL LTR ERVL 4223 4260 -1225 26 82 0 0 chr5 109645815 109645876 -89984274 + AT_rich Low_complexity Low_complexity 1 61 0 327 136 0 0 chr5 109646336 109646395 -89983755 + (TG)n Simple_repeat Simple_repeat 2 60 0 35 24 0 0 chr5 109647101 109647143 -89983007 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr5 109647209 109647232 -89982918 + AT_rich Low_complexity Low_complexity 1 23 0 31 26 0 0 chr5 109647411 109647449 -89982701 + AT_rich Low_complexity Low_complexity 1 38 0 201 158 0 26 chr5 109647819 109647857 -89982293 + (TG)n Simple_repeat Simple_repeat 2 38 0 26 30 0 0 chr5 109648419 109648452 -89981698 + AT_rich Low_complexity Low_complexity 1 33 0 1098 159 37 37 chr5 109649173 109649387 -89980763 - MSTB2 LTR MaLR 0 457 244 1125 300 44 5 chr5 109649389 109649756 -89980394 - MLT1D-int LTR MaLR -1353 382 2 2250 185 20 5 chr5 109649758 109650158 -89979992 - MSTB2 LTR MaLR 0 457 52 550 238 25 0 chr5 109650158 109650280 -89979870 - FLAM_A SINE Alu -16 126 2 455 100 0 0 chr5 109650283 109650343 -89979807 - MSTB2 LTR MaLR -397 60 1 3189 234 94 4 chr5 109651226 109652662 -89977488 - L1MB7 LINE L1 -10 6672 5111 279 0 0 0 chr5 109652675 109652706 -89977444 + (TTA)n Simple_repeat Simple_repeat 3 33 0 7074 26 39 0 chr5 109652706 109653725 -89976425 - L1PA4 LINE L1 -18 6137 5109 4962 33 5 0 chr5 109653725 109654333 -89975817 + L1PA4 LINE L1 4476 5086 -1060 4830 276 81 31 chr5 109654342 109654879 -89975271 - L1MB7 LINE L1 -1543 5101 4592 2239 107 0 0 chr5 109654879 109655170 -89974980 - AluSx SINE Alu -21 291 1 4830 276 81 31 chr5 109655170 109659082 -89971068 - L1MB7 LINE L1 -2052 4592 320 2045 109 14 0 chr5 109659420 109659735 -89970415 - AluSg SINE Alu 0 319 1 508 306 132 19 chr5 109660082 109660340 -89969810 + L2 LINE L2 3026 3312 -1 582 171 0 0 chr5 109660776 109660881 -89969269 - MLT1D LTR MaLR 0 505 401 1743 108 0 0 chr5 109660964 109661195 -89968955 - AluSq SINE Alu -15 298 68 750 270 26 11 chr5 109661197 109661386 -89968764 - MLT1D LTR MaLR -313 192 1 180 354 83 0 chr5 109661588 109661684 -89968466 - MER5B DNA MER1_type -74 104 1 6214 148 63 6 chr5 109662137 109663298 -89966852 - Tigger3b DNA MER2_type 0 1231 5 3334 229 15 6 chr5 109663512 109664177 -89965973 + HUERS-P2 LTR ERV1 947 1620 -1468 2975 96 2 55 chr5 109664177 109664646 -89965504 - MLT2A1 LTR ERVL 0 444 1 5394 96 11 11 chr5 109664646 109665397 -89964753 - HERVL-A1 LTR ERVL 0 5654 4904 251 167 0 0 chr5 109665426 109665468 -89964682 - THE1-int LTR MaLR -965 615 574 701 324 142 6 chr5 109665601 109665919 -89964231 + LTR16A LTR ERVL 78 438 -12 27 0 0 0 chr5 109667424 109667451 -89962699 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr5 109667543 109667567 -89962583 + AT_rich Low_complexity Low_complexity 1 24 0 201 39 0 0 chr5 109667948 109667974 -89962176 + (CA)n Simple_repeat Simple_repeat 1 26 0 298 133 10 0 chr5 109667984 109668050 -89962100 + L1MC4 LINE L1 1996 6983 -1339 304 256 47 23 chr5 109668071 109668157 -89961993 + L1MC4 LINE L1 6615 6702 -1340 297 300 0 0 chr5 109668175 109668285 -89961865 + (TA)n Simple_repeat Simple_repeat 1 110 0 249 289 39 39 chr5 109668288 109668380 -89961770 + L1MC4 LINE L1 6614 6708 -1334 333 0 0 0 chr5 109668380 109668417 -89961733 + (GA)n Simple_repeat Simple_repeat 2 38 0 249 289 39 39 chr5 109668417 109668452 -89961698 + L1MC4 LINE L1 6707 6741 -1301 198 0 0 0 chr5 109668454 109668476 -89961674 + (TA)n Simple_repeat Simple_repeat 2 23 0 571 105 0 35 chr5 109668504 109668647 -89961503 + (TA)n Simple_repeat Simple_repeat 2 139 0 2738 96 28 8 chr5 109668647 109669043 -89961107 - MLT2A1 LTR ERVL -40 404 1 3188 82 2 5 chr5 109669043 109669480 -89960670 - HERVL-A1 LTR ERVL 0 5654 5219 11845 84 1 0 chr5 109669520 109671051 -89959099 - HERVL-A1 LTR ERVL -3941 1713 182 2612 102 68 19 chr5 109671128 109671175 -89958975 - MLT2A1 LTR ERVL -1 443 400 333 0 0 0 chr5 109671175 109671212 -89958938 + (TA)n Simple_repeat Simple_repeat 2 38 0 2612 102 68 19 chr5 109671212 109671577 -89958573 - MLT2A1 LTR ERVL -44 400 11 267 31 0 0 chr5 109671580 109671612 -89958538 + (CA)n Simple_repeat Simple_repeat 1 32 0 502 128 43 0 chr5 109671614 109671731 -89958419 + (TA)n Simple_repeat Simple_repeat 2 123 0 14551 140 26 76 chr5 109672013 109674885 -89955265 + Tigger4(Zombi) DNA MER2_type 1 2731 0 470 305 28 33 chr5 109676488 109676701 -89953449 + L2 LINE L2 3102 3313 0 240 276 41 0 chr5 109677291 109677389 -89952761 + CT-rich Low_complexity Low_complexity 1 102 0 1683 268 80 47 chr5 109677930 109678703 -89951447 - L1ME2 LINE L1 -47 6117 5371 2020 113 7 10 chr5 109678703 109679003 -89951147 - AluSx SINE Alu -13 299 1 1683 268 80 47 chr5 109679003 109680061 -89950089 - L1ME2 LINE L1 -793 5371 4210 6188 103 4 9 chr5 109680119 109681885 -89948265 + L1PA14 LINE L1 4408 6161 0 25 31 0 0 chr5 109681885 109681917 -89948233 + AT_rich Low_complexity Low_complexity 1 32 0 387 0 0 0 chr5 109682467 109682510 -89947640 + (TA)n Simple_repeat Simple_repeat 2 44 0 1759 165 10 3 chr5 109682815 109683118 -89947032 + AluSx SINE Alu 1 305 -7 12521 91 9 4 chr5 109683401 109685223 -89944927 + L1P LINE L1 2027 3857 -2289 944 113 0 54 chr5 109685221 109685389 -89944761 + L1PA7 LINE L1 2260 2418 -3728 * 10373 84 9 1 chr5 109685389 109687624 -89942526 + L1PA7 LINE L1 3865 6153 -1 323 326 95 52 chr5 109688483 109688808 -89941342 + L3 LINE CR1 1233 1571 -6 200 35 35 0 chr5 109689323 109689352 -89940798 + (CAAAAA)n Simple_repeat Simple_repeat 6 35 0 21 0 0 0 chr5 109690582 109690603 -89939547 + AT_rich Low_complexity Low_complexity 1 21 0 270 169 13 26 chr5 109691352 109691429 -89938721 + GA-rich Low_complexity Low_complexity 3 78 0 2068 162 68 5 chr5 109691647 109692017 -89938133 - LTR39 LTR ERV1 0 783 391 1625 191 54 54 chr5 109692057 109692317 -89937833 - LTR39 LTR ERV1 -388 395 216 1638 188 14 0 chr5 109692317 109692605 -89937545 + AluJo SINE Alu 1 292 -20 1625 191 54 54 chr5 109692605 109692822 -89937328 - LTR39 LTR ERV1 -567 216 1 200 139 0 105 chr5 109693318 109693404 -89936746 + (TTATA)n Simple_repeat Simple_repeat 2 78 0 23 33 0 0 chr5 109695492 109695522 -89934628 + AT_rich Low_complexity Low_complexity 1 30 0 235 345 26 47 chr5 109697086 109697277 -89932873 - MIR SINE MIR -64 198 12 21 0 0 0 chr5 109697363 109697384 -89932766 + AT_rich Low_complexity Low_complexity 1 21 0 284 296 91 47 chr5 109697408 109697705 -89932445 - L1M4 LINE L1 -1163 4983 4674 418 310 70 0 chr5 109697879 109698008 -89932142 - MIR3 SINE MIR -3 205 68 202 114 29 0 chr5 109698353 109698388 -89931762 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 49 18 0 0 chr5 109698782 109698838 -89931312 + AT_rich Low_complexity Low_complexity 1 56 0 372 296 78 81 chr5 109698867 109699432 -89930718 + L1MEc LINE L1 802 1364 -5032 23 54 0 0 chr5 109699437 109699474 -89930676 + AT_rich Low_complexity Low_complexity 1 37 0 348 331 138 34 chr5 109699497 109699875 -89930275 + L1MEc LINE L1 1340 1756 -4640 2067 49 33 79 chr5 109700527 109700831 -89929319 - AluY SINE Alu -21 290 1 915 224 56 9 chr5 109700836 109701050 -89929100 - MER101B LTR ERV1 -346 224 1 904 264 105 25 chr5 109701908 109702223 -89927927 + MLT2F LTR ERVL 245 584 -79 183 129 0 0 chr5 109702499 109702530 -89927620 + (TG)n Simple_repeat Simple_repeat 2 32 0 1173 253 24 50 chr5 109702795 109703174 -89926976 - MLT1A2 LTR MaLR -4 370 2 9965 56 4 0 chr5 109704043 109706098 -89924052 - L1PA6 LINE L1 -6 6148 4107 9164 98 5 1 chr5 109706099 109707430 -89922720 + L1PA6 LINE L1 2755 4090 -2056 299 333 0 0 chr5 109707609 109707705 -89922445 + MIR SINE MIR 164 259 -3 1908 142 10 7 chr5 109707812 109708156 -89921994 - AluSx SINE Alu 0 312 1 22 35 0 0 chr5 109708466 109708495 -89921655 + AT_rich Low_complexity Low_complexity 1 29 0 613 311 138 23 chr5 109708763 109710074 -89920076 + L1M4 LINE L1 3173 4634 -1512 266 316 82 20 chr5 109710075 109710417 -89919733 + L1M4 LINE L1 4910 5272 -874 25 0 0 0 chr5 109711153 109711178 -89918972 + AT_rich Low_complexity Low_complexity 1 25 0 2062 99 7 7 chr5 109712087 109712390 -89917760 + L1PB1 LINE L1 5830 6132 -19 227 405 79 8 chr5 109712514 109712640 -89917510 + L2 LINE L2 3134 3268 -4 21 0 0 0 chr5 109713192 109713213 -89916937 + AT_rich Low_complexity Low_complexity 1 21 0 1478 242 74 81 chr5 109715424 109715995 -89914155 - MLT1E2 LTR MaLR -8 618 52 28 48 0 0 chr5 109716828 109716870 -89913280 + AT_rich Low_complexity Low_complexity 1 42 0 275 49 24 0 chr5 109717561 109717602 -89912548 + (TG)n Simple_repeat Simple_repeat 2 43 0 26 50 0 0 chr5 109718140 109718180 -89911970 + AT_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr5 109718526 109718550 -89911600 + AT_rich Low_complexity Low_complexity 1 24 0 208 305 73 12 chr5 109719686 109719768 -89910382 + L2 LINE L2 3209 3295 -18 671 269 273 12 chr5 109720447 109720942 -89909208 - LTR50 LTR ERVL -171 624 1 508 255 168 0 chr5 109721591 109721740 -89908410 + FAM SINE Alu 1 174 -11 43 47 0 0 chr5 109721753 109721817 -89908333 + AT_rich Low_complexity Low_complexity 1 64 0 397 270 73 57 chr5 109722124 109722372 -89907778 + HAL1b LINE L1 206 457 -891 21 0 0 0 chr5 109722476 109722497 -89907653 + AT_rich Low_complexity Low_complexity 1 21 0 264 227 45 57 chr5 109723035 109723123 -89907027 - MIR SINE MIR -108 154 68 22 35 0 0 chr5 109723243 109723272 -89906878 + AT_rich Low_complexity Low_complexity 1 29 0 301 230 44 35 chr5 109723771 109723884 -89906266 - MER63 DNA MER1_type -38 1023 910 2697 229 31 18 chr5 109724095 109724710 -89905440 - MER82 DNA MER2_type -29 624 2 228 48 71 24 chr5 109724787 109724829 -89905321 - L1MA5 LINE L1 0 6300 6257 2020 148 50 8 chr5 109724829 109725187 -89904963 + THE1C LTR MaLR 2 374 -1 7287 130 34 27 chr5 109725188 109726381 -89903769 + THE1C-int LTR MaLR 1 1202 -378 2487 98 24 1 chr5 109726381 109726806 -89903344 + LTR12 LTR ERV1 379 714 0 2486 115 8 8 chr5 109726809 109727184 -89902966 + THE1C LTR MaLR 1 375 0 1835 123 54 0 chr5 109727186 109727502 -89902648 - L1MA5A LINE L1 -41 6256 5924 450 272 139 29 chr5 109727497 109727913 -89902237 + L1ME LINE L1 4842 5303 -843 * 611 257 16 6 chr5 109727954 109728137 -89902013 + L1ME LINE L1 5313 5497 -665 325 269 159 73 chr5 109728176 109728421 -89901729 + L2 LINE L2 3029 3294 -19 208 386 85 5 chr5 109728730 109728919 -89901231 + MIR SINE MIR 7 210 -52 2256 97 7 3 chr5 109729568 109729878 -89900272 + AluSq SINE Alu 3 313 0 212 186 17 0 chr5 109729995 109730054 -89900096 + (TA)n Simple_repeat Simple_repeat 1 60 0 12288 243 26 21 chr5 109730093 109735687 -89894463 - L1PB4 LINE L1 -21 6837 1131 334 316 10 0 chr5 109735695 109735793 -89894357 - L1PB4 LINE L1 -6739 110 12 2179 223 22 2 chr5 109736518 109736981 -89893169 - MER70A LTR ERVL 0 472 1 313 269 48 97 chr5 109738292 109738519 -89891631 - L1MC4a LINE L1 -1880 5928 5713 1625 166 85 3 chr5 109738820 109739103 -89891047 - AluJb SINE Alu -5 307 2 26 50 0 0 chr5 109739107 109739147 -89891003 + AT_rich Low_complexity Low_complexity 1 40 0 511 298 66 70 chr5 109739380 109739880 -89890270 - L1MC4a LINE L1 -1088 5058 4561 28 48 0 0 chr5 109740283 109740325 -89889825 + AT_rich Low_complexity Low_complexity 1 42 0 309 51 0 0 chr5 109740548 109740587 -89889563 + (TG)n Simple_repeat Simple_repeat 2 40 0 1636 181 143 34 chr5 109741236 109741467 -89888683 - LTR2B LTR ERV1 0 490 285 180 111 0 0 chr5 109741467 109741494 -89888656 + (CAGAA)n Simple_repeat Simple_repeat 2 28 0 1636 181 143 34 chr5 109741494 109741704 -89888446 - LTR2B LTR ERV1 -205 285 1 1753 151 23 55 chr5 109742206 109742597 -89887553 - MER67C LTR ERV1 -248 266 1 256 319 0 0 chr5 109743435 109743504 -89886646 + (CATA)n Simple_repeat Simple_repeat 3 71 0 1846 196 20 18 chr5 109743762 109744154 -89885996 + MSTD LTR MaLR 1 393 -3 24 32 0 0 chr5 109745157 109745188 -89884962 + AT_rich Low_complexity Low_complexity 1 31 0 50 42 0 0 chr5 109745199 109745270 -89884880 + AT_rich Low_complexity Low_complexity 1 71 0 28 0 0 0 chr5 109745791 109745819 -89884331 + AT_rich Low_complexity Low_complexity 1 28 0 985 204 125 15 chr5 109747348 109747612 -89882538 + AluSg SINE Alu 1 293 -7 260 279 79 14 chr5 109747854 109748054 -89882096 - L1MCa LINE L1 -4837 1770 1373 2388 110 26 0 chr5 109749002 109749348 -89880802 - THE1A LTR MaLR 0 355 1 8067 115 13 1 chr5 109749348 109750483 -89879667 - THE1A-int LTR MaLR 0 1580 432 1204 172 65 115 chr5 109750587 109750970 -89879180 - Tigger5 DNA MER2_type -1352 971 608 1686 274 40 0 chr5 109750984 109751404 -89878746 - Tigger5 DNA MER2_type -1886 437 1 2476 163 30 0 chr5 109751404 109751810 -89878340 - MER34 LTR ERV1 -111 431 14 951 256 107 3 chr5 109752208 109752517 -89877633 + MER90 LTR ERV1 3 343 -271 229 143 24 0 chr5 109752517 109752559 -89877591 + MER90 LTR ERV1 572 614 0 193 175 0 35 chr5 109752657 109752714 -89877436 + GA-rich Low_complexity Low_complexity 4 58 0 245 301 125 75 chr5 109753788 109754147 -89876003 - MLT1H LTR MaLR -48 501 125 22 0 0 0 chr5 109754381 109754403 -89875747 + AT_rich Low_complexity Low_complexity 1 22 0 2435 223 89 18 chr5 109757646 109758319 -89871831 - L1MB8 LINE L1 -2 6176 5456 702 321 81 23 chr5 109758419 109758784 -89871366 + L2 LINE L2 2593 2984 -329 679 300 43 0 chr5 109758784 109759017 -89871133 - L2 LINE L2 -1360 1954 1712 21 0 0 0 chr5 109760199 109760220 -89869930 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 109761211 109761240 -89868910 + AT_rich Low_complexity Low_complexity 1 29 0 1713 121 57 8 chr5 109761565 109761830 -89868320 + AluJo SINE Alu 7 284 -28 251 276 62 52 chr5 109761898 109762090 -89868060 + HAL1 LINE L1 2230 2423 -84 197 304 18 0 chr5 109762176 109762227 -89867923 + L2 LINE L2 3252 3303 -10 189 367 16 0 chr5 109762227 109762332 -89867818 + MIR SINE MIR 4 111 -103 396 212 106 26 chr5 109762333 109762446 -89867704 + MER58B DNA MER1_type 209 330 -11 187 244 0 0 chr5 109763767 109763808 -89866342 + L2 LINE L2 3273 3313 0 434 264 56 30 chr5 109763975 109764173 -89865977 - MIR SINE MIR -45 217 16 268 404 14 7 chr5 109765293 109765439 -89864711 + MIR SINE MIR 20 166 -96 725 298 36 8 chr5 109765455 109765707 -89864443 - MIR SINE MIR -2 260 2 348 286 87 0 chr5 109765718 109765844 -89864306 + MIR SINE MIR 116 252 -10 22 35 0 0 chr5 109765844 109765873 -89864277 + AT_rich Low_complexity Low_complexity 1 29 0 263 320 0 0 chr5 109766294 109766369 -89863781 - L3 LINE CR1 -585 992 918 799 236 31 54 chr5 109766378 109766688 -89863462 - MLT2C1 LTR ERVL -8 406 105 1677 167 52 27 chr5 109766688 109767054 -89863096 + THE1C LTR MaLR 1 375 0 799 236 31 54 chr5 109767054 109767155 -89862995 - MLT2C1 LTR ERVL -309 105 3 326 360 0 7 chr5 109767320 109767467 -89862683 - MER69A DNA AcHobo -30 147 2 21 57 0 0 chr5 109767470 109767505 -89862645 + AT_rich Low_complexity Low_complexity 1 35 0 491 383 71 4 chr5 109767512 109767781 -89862369 - L3 LINE CR1 -808 769 483 302 349 108 29 chr5 109767931 109768172 -89861978 + MIR SINE MIR 3 262 0 23 33 0 0 chr5 109768191 109768221 -89861929 + AT_rich Low_complexity Low_complexity 1 30 0 182 304 29 43 chr5 109768663 109768732 -89861418 - L3 LINE CR1 -1315 262 195 279 0 0 0 chr5 109769569 109769600 -89860550 + (CA)n Simple_repeat Simple_repeat 1 31 0 4240 165 52 59 chr5 109769999 109771078 -89859072 + MER11C LTR ERVK 1 1071 0 2205 128 3 0 chr5 109771121 109771433 -89858717 + AluSp SINE Alu 1 313 0 384 246 26 26 chr5 109773126 109773240 -89856910 - LTR40a LTR ERVL -405 114 1 452 294 119 16 chr5 109774441 109774751 -89855399 - L1ME4a LINE L1 -44 6077 5736 342 115 0 0 chr5 109775646 109775698 -89854452 + (TA)n Simple_repeat Simple_repeat 2 53 0 5197 194 35 11 chr5 109777366 109778878 -89851272 + L1MC1 LINE L1 4771 6308 -25 1595 167 51 43 chr5 109779513 109779885 -89850265 - THE1C LTR MaLR 0 375 1 8189 133 83 38 chr5 109779885 109781395 -89848755 - THE1C-int LTR MaLR 0 1580 4 1623 145 116 29 chr5 109781398 109781743 -89848407 - THE1C LTR MaLR 0 375 1 3797 256 92 91 chr5 109782058 109784343 -89845807 - L1MC4a LINE L1 -12 7796 5510 469 333 123 16 chr5 109786970 109787336 -89842814 + LTR16A LTR ERVL 46 450 0 218 227 0 45 chr5 109788055 109788121 -89842029 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 21 0 0 0 chr5 109789943 109789964 -89840186 + AT_rich Low_complexity Low_complexity 1 21 0 1526 223 15 36 chr5 109790277 109790609 -89839541 - MLT2D LTR ERVL 0 414 90 180 97 0 0 chr5 109790609 109790640 -89839510 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 407 204 34 0 chr5 109790643 109790731 -89839419 - MLT2D LTR ERVL -319 95 5 2072 117 0 13 chr5 109791655 109791954 -89838196 + AluSx SINE Alu 3 297 -15 35 0 0 0 chr5 109791961 109791996 -89838154 + AT_rich Low_complexity Low_complexity 1 35 0 2567 26 7 7 chr5 109792047 109792355 -89837795 + AluY SINE Alu 3 310 -1 1532 222 55 24 chr5 109792501 109792884 -89837266 - MLT1C LTR MaLR -71 396 2 983 324 128 7 chr5 109793220 109793649 -89836501 + LTR16C LTR ERVL 1 481 -10 25 31 0 0 chr5 109794225 109794257 -89835893 + AT_rich Low_complexity Low_complexity 1 32 0 29 28 0 0 chr5 109794999 109795035 -89835115 + AT_rich Low_complexity Low_complexity 1 36 0 23 54 0 0 chr5 109795448 109795485 -89834665 + AT_rich Low_complexity Low_complexity 1 37 0 304 310 132 31 chr5 109795779 109796037 -89834113 - L1ME4a LINE L1 -195 5926 5643 264 355 65 0 chr5 109796117 109796224 -89833926 + L3 LINE CR1 1007 1120 -457 278 339 106 50 chr5 109796438 109796504 -89833646 - L3 LINE CR1 -635 942 881 1009 233 94 18 chr5 109796504 109796843 -89833307 + MLT1A1 LTR MaLR 1 365 0 278 339 106 50 chr5 109796843 109797219 -89832931 - L3 LINE CR1 -696 881 475 200 241 17 0 chr5 109797338 109797396 -89832754 + (TAA)n Simple_repeat Simple_repeat 2 60 0 300 87 58 14 chr5 109799606 109799675 -89830475 + CT-rich Low_complexity Low_complexity 4 75 0 250 186 51 17 chr5 109799775 109799834 -89830316 + CT-rich Low_complexity Low_complexity 6 66 0 914 115 0 0 chr5 109800114 109800244 -89829906 - AluSg/x SINE Alu -17 295 166 22 0 0 0 chr5 109802637 109802659 -89827491 + AT_rich Low_complexity Low_complexity 1 22 0 7866 204 117 57 chr5 109803999 109804813 -89825337 - L1MC1 LINE L1 -34 7737 6973 210 71 0 0 chr5 109804813 109804841 -89825309 + (TG)n Simple_repeat Simple_repeat 1 28 0 7866 204 117 57 chr5 109804841 109807299 -89822851 - L1MC1 LINE L1 -798 6973 4284 24 0 0 0 chr5 109807438 109807462 -89822688 + AT_rich Low_complexity Low_complexity 1 24 0 198 380 53 20 chr5 109807850 109808000 -89822150 - MIR3 SINE MIR -38 170 16 1829 203 8 6 chr5 109808049 109808414 -89821736 - MER47A DNA MER2_type 0 366 1 549 265 62 6 chr5 109808990 109809152 -89820998 + MIR SINE MIR 3 173 -89 21 71 0 0 chr5 109809186 109809228 -89820922 + AT_rich Low_complexity Low_complexity 1 42 0 34 72 0 0 chr5 109810500 109810569 -89819581 + AT_rich Low_complexity Low_complexity 1 69 0 24 0 0 0 chr5 109812359 109812383 -89817767 + AT_rich Low_complexity Low_complexity 1 24 0 420 323 39 0 chr5 109813345 109813472 -89816678 + L2 LINE L2 3182 3313 0 350 317 225 0 chr5 109813636 109813898 -89816252 - L2 LINE L2 -37 3276 2956 305 222 16 0 chr5 109813965 109814028 -89816122 - L2 LINE L2 -537 2777 2714 2050 134 0 7 chr5 109814327 109814626 -89815524 + AluSq SINE Alu 1 297 -16 46 19 0 0 chr5 109814735 109814788 -89815362 + AT_rich Low_complexity Low_complexity 1 53 0 1668 182 14 2 chr5 109814916 109815353 -89814797 + LTR19A LTR ERV1 1 480 -6 936 177 13 0 chr5 109815358 109815516 -89814634 + LTR19A-int LTR ERV1 1 160 -5426 35353 164 51 45 chr5 109815516 109823165 -89806985 + HERVFH19I LTR ERV1 21 7719 0 2548 134 92 5 chr5 109823165 109823612 -89806538 + LTR19A LTR ERV1 1 486 0 1135 219 14 0 chr5 109825777 109826055 -89804095 - L1MA4 LINE L1 -6 6294 6013 2224 119 0 0 chr5 109826112 109826423 -89803727 + AluY SINE Alu 1 311 0 846 258 113 12 chr5 109826693 109826941 -89803209 - MLT1E1 LTR MaLR -381 273 1 7580 156 37 12 chr5 109827158 109829609 -89800541 + L1MA1 LINE L1 3796 6302 0 522 258 162 30 chr5 109829685 109829883 -89800267 + MIR SINE MIR 11 234 -28 1360 128 5 0 chr5 109829890 109830093 -89800057 + L1M1 LINE L1 5550 5753 -549 240 364 61 8 chr5 109830385 109830517 -89799633 + L3 LINE CR1 1369 1507 -70 24 100 0 0 chr5 109830615 109830695 -89799455 + AT_rich Low_complexity Low_complexity 1 80 0 24 32 0 0 chr5 109831885 109831916 -89798234 + AT_rich Low_complexity Low_complexity 1 31 0 451 283 47 27 chr5 109832220 109832403 -89797747 - MIR SINE MIR -32 230 45 537 344 76 16 chr5 109833624 109833874 -89796276 + LTR16A LTR ERVL 26 290 -160 2128 124 3 6 chr5 109834016 109834330 -89795820 - AluSq SINE Alu 0 313 1 417 338 13 0 chr5 109834347 109834498 -89795652 - MIR SINE MIR -106 156 4 228 200 0 0 chr5 109834959 109835009 -89795141 + (CA)n Simple_repeat Simple_repeat 2 51 0 351 281 39 65 chr5 109836079 109836232 -89793918 + MER5A DNA MER1_type 35 183 -6 1862 110 0 0 chr5 109837739 109837994 -89792156 + AluSc SINE Alu 1 255 -54 252 130 0 0 chr5 109839528 109839574 -89790576 + LTR66 LTR ERVL 394 439 -171 456 19 0 0 chr5 109839574 109839627 -89790523 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 522 144 72 12 chr5 109840345 109840508 -89789642 - MER5C DNA MER1_type 0 324 94 286 290 0 0 chr5 109840817 109840886 -89789264 + GA-rich Low_complexity Low_complexity 3 71 0 25 31 0 0 chr5 109841927 109841959 -89788191 + AT_rich Low_complexity Low_complexity 1 32 0 476 308 62 31 chr5 109841987 109842214 -89787936 + MIR SINE MIR 16 249 -13 3075 179 11 41 chr5 109842250 109842866 -89787284 - MER7C DNA MER2_type -2 600 3 551 318 35 10 chr5 109843497 109843695 -89786455 + MIR SINE MIR 5 207 -55 812 211 23 18 chr5 109845611 109845817 -89784333 - FRAM SINE Alu 0 176 1 234 174 0 22 chr5 109846135 109846181 -89783969 + GA-rich Low_complexity Low_complexity 2 46 0 378 229 24 0 chr5 109846229 109846312 -89783838 + MIR SINE MIR 123 207 -55 297 0 0 0 chr5 109847697 109847730 -89782420 + (CA)n Simple_repeat Simple_repeat 2 34 0 31 0 0 0 chr5 109848965 109848996 -89781154 + AT_rich Low_complexity Low_complexity 1 31 0 583 169 58 69 chr5 109849017 109849206 -89780944 - MER53 DNA DNA -2 187 1 2286 87 3 0 chr5 109849300 109849598 -89780552 - AluY SINE Alu -12 299 1 396 0 0 0 chr5 109851836 109851880 -89778270 + (CA)n Simple_repeat Simple_repeat 1 44 0 4456 134 89 4 chr5 109852677 109853438 -89776712 + LTR1B LTR ERV1 1 826 0 22 0 0 0 chr5 109853768 109853790 -89776360 + AT_rich Low_complexity Low_complexity 1 22 0 2309 104 0 0 chr5 109856930 109857239 -89772911 - AluSg1 SINE Alu 0 309 1 306 0 0 0 chr5 109857333 109857367 -89772783 + (TA)n Simple_repeat Simple_repeat 1 34 0 267 31 0 0 chr5 109857366 109857398 -89772752 + (GA)n Simple_repeat Simple_repeat 2 33 0 * 2174 108 0 0 chr5 109857754 109858042 -89772108 - AluSg SINE Alu -22 288 1 1442 200 3 32 chr5 109858934 109859244 -89770906 + AluJo SINE Alu 1 301 -11 3230 151 4 11 chr5 109859344 109859875 -89770275 - MER1A DNA MER1_type 0 527 1 684 291 106 20 chr5 109860031 109860285 -89769865 - MLT1I LTR MaLR -34 375 100 5065 143 65 81 chr5 109861344 109862045 -89768105 + Tigger3b DNA MER2_type 5 679 -2349 2360 88 0 0 chr5 109862045 109862353 -89767797 - AluSg SINE Alu -2 308 1 5065 143 65 81 chr5 109862353 109862898 -89767252 + Tigger3b DNA MER2_type 679 1231 0 444 19 0 0 chr5 109864459 109864512 -89765638 + (CA)n Simple_repeat Simple_repeat 2 54 0 279 307 113 62 chr5 109864518 109864792 -89765358 - L2 LINE L2 -93 3220 2933 25 31 0 0 chr5 109865504 109865536 -89764614 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 109865606 109865627 -89764523 + AT_rich Low_complexity Low_complexity 1 21 0 275 258 84 107 chr5 109866939 109867164 -89762986 - MLT1K LTR MaLR -23 565 346 21 82 0 0 chr5 109867598 109867647 -89762503 + AT_rich Low_complexity Low_complexity 1 49 0 608 149 0 9 chr5 109867935 109868049 -89762101 + (GGAA)n Simple_repeat Simple_repeat 4 116 0 2573 23 0 26 chr5 109873455 109873761 -89756389 - AluY SINE Alu -13 298 1 315 267 35 20 chr5 109874472 109874531 -89755619 - MLT1H1 LTR MaLR -2 528 471 1491 188 105 3 chr5 109874531 109874845 -89755305 - MER7A DNA MER2_type -2 344 1 315 267 35 20 chr5 109874845 109874921 -89755229 - MLT1H1 LTR MaLR -59 471 408 231 88 0 0 chr5 109875252 109875286 -89754864 + (GA)n Simple_repeat Simple_repeat 2 35 0 224 195 0 0 chr5 109875568 109875609 -89754541 + CT-rich Low_complexity Low_complexity 1 41 0 204 40 0 0 chr5 109875642 109875667 -89754483 + (T)n Simple_repeat Simple_repeat 1 25 0 495 199 174 50 chr5 109875743 109875904 -89754246 - MLT1G1 LTR MaLR -414 181 1 214 302 186 0 chr5 109876593 109876679 -89753471 + MIR SINE MIR 34 135 -73 230 319 160 8 chr5 109876853 109876972 -89753178 - MIR SINE MIR -5 257 121 11362 213 42 14 chr5 109876995 109880431 -89749719 + L1MA4A LINE L1 11 3349 -3656 2350 130 11 21 chr5 109880431 109880808 -89749342 + THE1C LTR MaLR 3 375 0 11362 213 42 14 chr5 109880808 109884145 -89746005 + L1MA4A LINE L1 3349 6989 -16 29 47 0 0 chr5 109884151 109884194 -89745956 + AT_rich Low_complexity Low_complexity 1 43 0 343 323 46 8 chr5 109884904 109885034 -89745116 - MIR3 SINE MIR -18 190 56 1528 232 25 15 chr5 109886097 109886489 -89743661 + MSTD LTR MaLR 1 396 0 296 237 0 21 chr5 109887203 109887300 -89742850 - L1M4 LINE L1 -414 6581 6487 2215 116 0 0 chr5 109887338 109887640 -89742510 + AluSg SINE Alu 3 304 -6 687 203 0 0 chr5 109887644 109887767 -89742383 - FLAM_A SINE Alu -10 123 1 1204 245 23 0 chr5 109887767 109888069 -89742081 - L1M4 LINE L1 -488 6507 6199 3102 250 97 11 chr5 109888070 109889118 -89741032 - L1M4 LINE L1 -1009 5948 4811 876 288 34 17 chr5 109889159 109889683 -89740467 - L1M4 LINE L1 -2401 4556 4024 21 36 0 0 chr5 109889683 109889711 -89740439 + AT_rich Low_complexity Low_complexity 1 28 0 227 232 71 30 chr5 109889711 109889810 -89740340 - L1M4 LINE L1 -4312 2826 2724 1784 180 42 12 chr5 109889960 109890293 -89739857 + MER2 DNA MER2_type 2 344 0 1552 269 43 18 chr5 109890584 109891482 -89738668 - L1M4 LINE L1 -4701 2258 1343 222 118 0 0 chr5 109891485 109891519 -89738631 + (CATA)n Simple_repeat Simple_repeat 2 35 0 227 169 77 0 chr5 109891520 109891585 -89738565 - L1MCa LINE L1 -4362 2064 1995 256 197 45 0 chr5 109891613 109891679 -89738471 - L1MCa LINE L1 -4363 2063 1995 245 310 0 0 chr5 109891660 109891747 -89738403 + L1MC4 LINE L1 6617 6703 -1339 * 269 287 0 0 chr5 109891724 109891811 -89738339 + L1MC4 LINE L1 6617 6703 -1339 * 271 266 5 17 chr5 109891779 109891897 -89738253 + L1MC4 LINE L1 6614 6703 -1339 414 254 0 0 chr5 109891897 109892023 -89738127 + (TATATG)n Simple_repeat Simple_repeat 2 127 0 2127 109 6 34 chr5 109892031 109892352 -89737798 - AluSx SINE Alu 0 312 1 315 0 0 0 chr5 109892559 109892594 -89737556 + (CA)n Simple_repeat Simple_repeat 2 36 0 2980 269 75 21 chr5 109892616 109893506 -89736644 - L1M4 LINE L1 -5592 1267 330 489 309 85 35 chr5 109893506 109893930 -89736220 + MER65A LTR ERV1 1 445 0 688 231 33 66 chr5 109893930 109894092 -89736058 - L1M4 LINE L1 -6526 333 182 2360 50 0 7 chr5 109894092 109894389 -89735761 + AluY SINE Alu 1 295 -16 688 231 33 66 chr5 109894389 109894499 -89735651 - L1M4 LINE L1 -6677 182 70 234 330 56 39 chr5 109894993 109895204 -89734946 - MIR SINE MIR 0 262 13 1514 227 0 3 chr5 109896687 109897000 -89733150 + AluJo SINE Alu 1 312 0 1459 138 0 0 chr5 109897901 109898126 -89732024 + L1 LINE L1 4058 4282 -1864 225 236 127 0 chr5 109898679 109898734 -89731416 + MLT1I LTR MaLR 280 341 -68 863 199 0 12 chr5 109898950 109899111 -89731039 - FRAM SINE Alu -11 165 7 24 0 0 0 chr5 109899121 109899145 -89731005 + AT_rich Low_complexity Low_complexity 1 24 0 180 302 38 0 chr5 109899447 109899500 -89730650 - MIR SINE MIR 0 262 208 361 399 11 16 chr5 109899504 109899687 -89730463 + MIR SINE MIR 14 195 -67 187 308 92 15 chr5 109900058 109900123 -89730027 - L2 LINE L2 -13 3259 3190 254 341 22 0 chr5 109900206 109900297 -89729853 + MIR SINE MIR 47 139 -123 12957 202 55 11 chr5 109900938 109904194 -89725956 + L1PB1 LINE L1 2 3113 -3754 1882 153 50 36 chr5 109904194 109904553 -89725597 + THE1B LTR MaLR 1 364 0 11419 96 4 9 chr5 109904553 109904983 -89725167 + THE1B-int LTR MaLR 1 432 -1148 1856 183 0 0 chr5 109904983 109905294 -89724856 + AluSq SINE Alu 1 311 -2 11419 96 4 9 chr5 109905294 109906452 -89723698 + THE1B-int LTR MaLR 432 1580 0 2018 143 48 31 chr5 109906452 109906810 -89723340 + THE1B LTR MaLR 1 364 0 12957 202 55 11 chr5 109906810 109909631 -89720519 + L1PB1 LINE L1 3112 6503 -364 180 0 0 0 chr5 109909640 109909660 -89720490 + (TG)n Simple_repeat Simple_repeat 1 20 0 186 103 0 0 chr5 109909660 109909689 -89720461 + (GA)n Simple_repeat Simple_repeat 2 30 0 2583 83 3 29 chr5 109909765 109909785 -89720365 + L1PB1 LINE L1 6490 6509 -358 333 0 0 0 chr5 109909785 109909822 -89720328 + (CA)n Simple_repeat Simple_repeat 1 37 0 2583 83 3 29 chr5 109909822 109910186 -89719964 + L1PB1 LINE L1 6509 6864 -3 30 27 0 0 chr5 109910430 109910467 -89719683 + AT_rich Low_complexity Low_complexity 1 37 0 198 0 0 0 chr5 109910494 109910516 -89719634 + (TG)n Simple_repeat Simple_repeat 1 22 0 1057 277 51 46 chr5 109911054 109911447 -89718703 + MLT1I LTR MaLR 11 405 -4 400 371 15 15 chr5 109911582 109911787 -89718363 - MIR SINE MIR -57 205 1 1852 114 0 4 chr5 109912372 109912688 -89717462 - AluSx SINE Alu 0 345 31 26 30 0 0 chr5 109913599 109913632 -89716518 + AT_rich Low_complexity Low_complexity 1 33 0 251 324 130 19 chr5 109915214 109915322 -89714828 - MIR SINE MIR -116 146 27 2184 109 0 0 chr5 109915812 109916105 -89714045 + AluSx SINE Alu 3 295 -17 1899 163 122 13 chr5 109919404 109919790 -89710360 - MSTA LTR MaLR 0 428 1 445 98 112 0 chr5 109919994 109920093 -89710057 - MER67D LTR ERV1 -361 153 74 2255 115 0 3 chr5 109920093 109920405 -89709745 + AluSx SINE Alu 1 311 -1 325 209 35 0 chr5 109920427 109920513 -89709637 - MER67D LTR ERV1 -425 89 1 238 218 0 0 chr5 109921760 109921815 -89708335 - MIR SINE MIR -88 174 120 30 27 0 0 chr5 109922090 109922127 -89708023 + AT_rich Low_complexity Low_complexity 1 37 0 21 57 0 0 chr5 109922442 109922477 -89707673 + AT_rich Low_complexity Low_complexity 1 35 0 6323 210 51 22 chr5 109922828 109924311 -89705839 + L1PA15-16 LINE L1 1 1432 -5417 274 80 40 0 chr5 109924343 109924393 -89705757 + GA-rich Low_complexity Low_complexity 1 52 0 189 159 0 0 chr5 109924823 109924867 -89705283 + A-rich Low_complexity Low_complexity 5 48 0 22 56 0 0 chr5 109925364 109925400 -89704750 + AT_rich Low_complexity Low_complexity 1 36 0 231 88 0 0 chr5 109926034 109926068 -89704082 + (TG)n Simple_repeat Simple_repeat 1 34 0 1382 78 11 0 chr5 109926870 109927061 -89703089 - L1PA4 LINE L1 -2 6153 5961 22 35 0 0 chr5 109928404 109928433 -89701717 + AT_rich Low_complexity Low_complexity 1 29 0 35 63 0 0 chr5 109928463 109928526 -89701624 + AT_rich Low_complexity Low_complexity 1 63 0 379 224 24 24 chr5 109928526 109928691 -89701459 + (TTATA)n Simple_repeat Simple_repeat 5 169 0 284 145 58 17 chr5 109928693 109928865 -89701285 + (TA)n Simple_repeat Simple_repeat 2 180 0 332 324 45 81 chr5 109929550 109929604 -89700546 - MIR SINE MIR -36 226 172 563 184 14 116 chr5 109929604 109929682 -89700468 + MER53 DNA DNA 4 88 -101 1639 154 55 4 chr5 109929682 109929954 -89700196 - AluJb SINE Alu -25 287 2 563 184 14 116 chr5 109929954 109930082 -89700068 + MER53 DNA DNA 88 189 0 332 324 45 81 chr5 109930082 109930249 -89699901 - MIR SINE MIR -90 172 13 238 358 99 7 chr5 109931759 109931910 -89698240 + L2 LINE L2 2714 2878 -436 258 343 98 0 chr5 109931986 109932088 -89698062 + L2 LINE L2 2930 3041 -231 182 393 36 9 chr5 109932478 109932590 -89697560 + MIR SINE MIR 20 134 -128 488 110 0 12 chr5 109932592 109932674 -89697476 + (GGA)n Simple_repeat Simple_repeat 3 83 0 195 171 0 0 chr5 109932691 109932726 -89697424 + L2 LINE L2 3262 3296 -17 1768 125 44 34 chr5 109933527 109933823 -89696327 + AluSq SINE Alu 1 299 -14 1480 306 153 25 chr5 109934284 109934699 -89695451 + L1MDb LINE L1 22 383 -6026 4734 193 18 7 chr5 109934699 109935590 -89694560 - MER54A LTR ERVL 0 901 1 2250 89 0 7 chr5 109935592 109935894 -89694256 + AluSc SINE Alu 1 300 -9 1480 306 153 25 chr5 109935894 109936229 -89693921 + L1MDb LINE L1 383 871 -5538 3776 212 38 43 chr5 109936511 109937521 -89692629 - L1PA15-16 LINE L1 -4054 2795 1791 434 319 16 74 chr5 109937540 109937850 -89692300 - L1PA15-16 LINE L1 -5886 964 673 326 402 45 25 chr5 109938016 109938526 -89691624 - L1M2 LINE L1 -6320 529 10 337 285 38 38 chr5 109939373 109939559 -89690591 - L1MC4a LINE L1 -1928 5880 5695 1021 132 5 68 chr5 109939564 109939754 -89690396 - AluSc SINE Alu 0 309 132 2253 80 10 7 chr5 109939754 109940077 -89690073 - AluSc SINE Alu 0 309 1 238 328 31 16 chr5 109940143 109940271 -89689879 - L1MC4a LINE L1 -525 5639 5510 42 0 0 0 chr5 109942332 109942374 -89687776 + AT_rich Low_complexity Low_complexity 1 42 0 31 68 0 0 chr5 109942411 109942470 -89687680 + AT_rich Low_complexity Low_complexity 1 59 0 265 327 19 19 chr5 109942483 109942590 -89687560 + L1MC4a LINE L1 4018 4124 -2022 571 68 0 0 chr5 109942739 109942836 -89687314 + L1PA3 LINE L1 10 380 -6081 * 36515 36 32 0 chr5 109942803 109943470 -89686680 + L1PA3 LINE L1 893 1537 -4933 185 0 40 0 chr5 109943470 109943495 -89686655 + (AAATG)n Simple_repeat Simple_repeat 5 30 0 36515 36 32 0 chr5 109943495 109948226 -89681924 + L1PA3 LINE L1 1537 6470 0 192 200 0 0 chr5 109948912 109948957 -89681193 + (TA)n Simple_repeat Simple_repeat 2 46 0 660 281 183 18 chr5 109949159 109949607 -89680543 + L1MC4a LINE L1 5335 5856 -1952 2173 113 0 0 chr5 109949966 109950268 -89679882 - AluSg SINE Alu -2 308 7 23 33 0 0 chr5 109950318 109950348 -89679802 + AT_rich Low_complexity Low_complexity 1 30 0 287 310 20 10 chr5 109950510 109950610 -89679540 + MIR3 SINE MIR 97 197 -11 21 36 0 0 chr5 109950808 109950836 -89679314 + AT_rich Low_complexity Low_complexity 1 28 0 255 296 66 61 chr5 109951671 109951867 -89678283 + MIR SINE MIR 66 262 0 314 284 89 47 chr5 109952518 109952687 -89677463 - MIR SINE MIR -26 236 61 210 375 0 0 chr5 109952715 109952787 -89677363 - L2 LINE L2 -17 3255 3184 240 338 0 0 chr5 109957173 109957241 -89672909 - L3 LINE CR1 -2 1575 1508 2563 194 12 25 chr5 109957301 109957889 -89672261 + L1MB5 LINE L1 5595 6174 0 12829 159 43 26 chr5 109959310 109959985 -89670165 - Tigger1 DNA MER2_type 0 2418 1756 1935 123 11 4 chr5 109959985 109960290 -89669860 - AluSc SINE Alu 0 307 1 12829 159 43 26 chr5 109960290 109961991 -89668159 - Tigger1 DNA MER2_type -662 1756 1 537 115 0 0 chr5 109966412 109966499 -89663651 + (GGA)n Simple_repeat Simple_repeat 2 88 0 314 382 122 0 chr5 109966663 109966794 -89663356 - MER91A DNA MER1_type -48 148 2 833 304 117 7 chr5 109967139 109967557 -89662593 + LTR16B LTR ERVL 1 464 0 450 366 59 15 chr5 109967558 109967962 -89662188 + HERV16 LTR ERVL 2 423 -4573 1596 196 3 26 chr5 109968230 109968541 -89661609 + AluJb SINE Alu 3 306 -6 1887 325 48 14 chr5 109968576 109969376 -89660774 + HERV16 LTR ERVL 755 1581 -3415 432 53 53 0 chr5 109969403 109969478 -89660672 + A-rich Low_complexity Low_complexity 2 80 0 2066 193 25 0 chr5 109969527 109969927 -89660223 + L1PB4 LINE L1 5736 6145 -11 2642 338 52 28 chr5 109969935 109971280 -89658870 + HERV16 LTR ERVL 1714 3090 -1906 2360 136 6 3 chr5 109971448 109971808 -89658342 - THE1B LTR MaLR -1 363 3 672 272 52 86 chr5 109971850 109972118 -89658032 + LTR16B LTR ERVL 25 283 -181 5447 93 3 26 chr5 109972125 109972890 -89657260 + THE1B-int LTR MaLR 834 1580 0 2349 101 27 33 chr5 109972890 109973256 -89656894 + THE1B LTR MaLR 1 364 0 216 182 0 0 chr5 109973373 109973417 -89656733 + (TATATG)n Simple_repeat Simple_repeat 6 49 0 2026 77 0 0 chr5 109973572 109973831 -89656319 + AluY SINE Alu 44 302 -9 270 239 0 0 chr5 109973927 109974019 -89656131 + (TA)n Simple_repeat Simple_repeat 1 92 0 558 211 17 0 chr5 109974146 109974321 -89655829 + (TA)n Simple_repeat Simple_repeat 2 179 0 183 80 0 0 chr5 109974334 109974359 -89655791 + (TATG)n Simple_repeat Simple_repeat 4 28 0 279 153 10 82 chr5 109974506 109974604 -89655546 + L1MC4 LINE L1 6613 6703 -1339 243 220 17 0 chr5 109974605 109974664 -89655486 + (TA)n Simple_repeat Simple_repeat 2 61 0 33 85 0 0 chr5 109974755 109974837 -89655313 + AT_rich Low_complexity Low_complexity 1 82 0 221 154 15 31 chr5 109974919 109974984 -89655166 + T-rich Low_complexity Low_complexity 4 67 0 249 222 0 42 chr5 109975095 109975167 -89654983 - L1MC5 LINE L1 -42 7919 7851 212 188 10 83 chr5 109975263 109975455 -89654695 + (TAA)n Simple_repeat Simple_repeat 3 180 0 202 289 22 0 chr5 109975577 109975622 -89654528 - L3 LINE CR1 -14 1563 1518 257 348 100 9 chr5 109976316 109976485 -89653665 + MIR SINE MIR 42 222 -40 699 172 83 124 chr5 109977482 109977772 -89652378 + LTR37B LTR ERV1 187 464 -4 25 51 0 0 chr5 109978820 109978859 -89651291 + AT_rich Low_complexity Low_complexity 1 39 0 21 71 0 0 chr5 109978925 109978967 -89651183 + AT_rich Low_complexity Low_complexity 1 42 0 257 281 18 92 chr5 109980640 109980804 -89649346 + L2 LINE L2 3161 3312 -1 483 18 0 0 chr5 109980995 109981051 -89649099 + (TAAA)n Simple_repeat Simple_repeat 3 58 0 27 29 0 0 chr5 109981221 109981255 -89648895 + AT_rich Low_complexity Low_complexity 1 34 0 207 281 0 0 chr5 109982058 109982140 -89648010 + GA-rich Low_complexity Low_complexity 1 82 0 38 51 0 0 chr5 109982558 109982617 -89647533 + AT_rich Low_complexity Low_complexity 1 59 0 27 49 0 0 chr5 109983025 109983066 -89647084 + AT_rich Low_complexity Low_complexity 1 41 0 2650 218 51 65 chr5 109984028 109984335 -89645815 + L1MCa LINE L1 34 344 -6082 3323 97 102 43 chr5 109984335 109984911 -89645239 + MER4B LTR ERV1 1 610 0 2650 218 51 65 chr5 109984911 109986395 -89643755 + L1MCa LINE L1 344 1575 -4851 1887 169 0 0 chr5 109986433 109986734 -89643416 - AluSx SINE Alu -11 301 1 303 204 35 148 chr5 109986850 109986992 -89643158 - L1MC3 LINE L1 -1098 6687 6615 3317 211 29 14 chr5 109987032 109987797 -89642353 - L1MC3 LINE L1 -1318 6467 5692 894 231 34 5 chr5 109988847 109989055 -89641095 - MER58A DNA MER1_type 0 224 11 219 186 0 0 chr5 109990586 109990629 -89639521 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 236 30 30 0 chr5 109990750 109990783 -89639367 + (TA)n Simple_repeat Simple_repeat 1 34 0 449 300 50 0 chr5 109990783 109990943 -89639207 + MER58 DNA MER1_type 17 184 -2236 * 551 156 85 35 chr5 109990940 109991081 -89639069 + MER58 DNA MER1_type 2271 2418 -2 1135 243 124 13 chr5 109991500 109992052 -89638098 + MLT1E1 LTR MaLR 1 654 0 964 188 45 0 chr5 109993350 109993526 -89636624 + MER6 DNA MER2_type 1 184 -681 1662 132 7 7 chr5 109993607 109993888 -89636262 + MER6 DNA MER2_type 583 863 -2 31 68 0 0 chr5 109994307 109994366 -89635784 + AT_rich Low_complexity Low_complexity 1 59 0 2624 244 62 12 chr5 109996290 109997111 -89633039 - L1ME2 LINE L1 0 6164 5303 327 25 0 0 chr5 109997175 109997215 -89632935 + (CA)n Simple_repeat Simple_repeat 2 41 0 1452 356 44 45 chr5 109997297 109998241 -89631909 - ERVL LTR ERVL -748 5016 4072 345 62 0 0 chr5 109998241 109998289 -89631861 + (TG)n Simple_repeat Simple_repeat 1 48 0 1452 356 44 45 chr5 109998289 109998594 -89631556 - ERVL LTR ERVL -1692 4072 3768 288 258 34 0 chr5 109998696 109998785 -89631365 - ERVL LTR ERVL -1705 3291 3200 234 0 0 0 chr5 109999148 109999174 -89630976 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2193 207 92 64 chr5 109999539 110000277 -89629873 - LTR1B LTR ERV1 -67 759 1 402 258 55 6 chr5 110000902 110001065 -89629085 + L1MC5 LINE L1 7725 7895 -66 787 267 40 4 chr5 110003271 110003496 -89626654 + MIR SINE MIR 30 262 0 198 103 0 0 chr5 110003877 110003906 -89626244 + (TG)n Simple_repeat Simple_repeat 2 30 0 22 70 0 0 chr5 110003906 110003949 -89626201 + AT_rich Low_complexity Low_complexity 1 43 0 227 380 63 7 chr5 110004073 110004215 -89625935 + MLT1H1 LTR MaLR 67 216 -339 301 247 153 86 chr5 110004549 110004934 -89625216 - L1MC5 LINE L1 -202 7759 7349 421 95 0 0 chr5 110005237 110005300 -89624850 - L1MB3 LINE L1 -4 6179 6117 487 186 49 0 chr5 110005300 110005402 -89624748 - U6 snRNA snRNA 0 107 1 332 320 66 31 chr5 110005645 110005873 -89624277 - L1ME2 LINE L1 -1112 5034 4799 378 306 55 32 chr5 110006064 110006283 -89623867 - L1ME2 LINE L1 -2406 3740 3517 6386 73 5 1 chr5 110007944 110008788 -89621362 + L1PA7 LINE L1 5303 6149 -5 22 70 0 0 chr5 110009067 110009110 -89621040 + AT_rich Low_complexity Low_complexity 1 43 0 2320 132 22 0 chr5 110009155 110009511 -89620639 - THE1B LTR MaLR 0 364 1 183 156 0 0 chr5 110009757 110009789 -89620361 + (TAA)n Simple_repeat Simple_repeat 1 32 0 811 264 14 9 chr5 110060841 110061057 -89569093 + MER20 DNA MER1_type 2 218 -1 1530 138 0 0 chr5 110062844 110063068 -89567082 - AluSg/x SINE Alu -16 294 71 1754 120 0 3 chr5 110063408 110063692 -89566458 + AluYb8 SINE Alu 36 318 0 1812 205 55 0 chr5 110066011 110066396 -89563754 + L1MC1 LINE L1 5668 6073 -260 9430 100 8 10 chr5 110066491 110068677 -89561473 - L1PA7 LINE L1 -3 6151 3969 11544 137 48 15 chr5 110068706 110069314 -89560836 - L1PA7 LINE L1 -3138 3008 2421 207 69 0 0 chr5 110069314 110069343 -89560807 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 11544 137 48 15 chr5 110069343 110070754 -89559396 - L1PA7 LINE L1 -3725 2421 923 1233 63 0 0 chr5 110070751 110070909 -89559241 + L1P3 LINE L1 5454 5611 -543 * 3001 97 29 2 chr5 110070905 110071381 -89558769 + L1P LINE L1 3037 3525 -2621 882 166 30 0 chr5 110071446 110071615 -89558535 - L1MC1 LINE L1 0 6333 6160 1935 9 0 5 chr5 110071715 110071934 -89558216 - AluYb8 SINE Alu -65 253 36 29 0 0 0 chr5 110071972 110072001 -89558149 + AT_rich Low_complexity Low_complexity 1 29 0 2739 275 89 11 chr5 110072117 110073392 -89556758 - L1M4 LINE L1 -2325 3821 2447 22 0 0 0 chr5 110073566 110073588 -89556562 + AT_rich Low_complexity Low_complexity 1 22 0 355 349 30 30 chr5 110073658 110073713 -89556437 - L1MEc LINE L1 -6206 190 136 2724 10 3 0 chr5 110073713 110074018 -89556132 - AluYa5 SINE Alu -5 306 1 355 349 30 30 chr5 110074018 110074131 -89556019 - L1MEc LINE L1 -6259 137 22 483 283 54 21 chr5 110074141 110074477 -89555673 + Charlie2 DNA MER1_type 2484 2830 -32 24 0 0 0 chr5 110075000 110075024 -89555126 + AT_rich Low_complexity Low_complexity 1 24 0 2435 60 0 7 chr5 110075200 110075500 -89554650 + AluY SINE Alu 1 298 -13 529 281 77 14 chr5 110075865 110076154 -89553996 - MLT1G1 LTR MaLR -207 388 70 267 103 0 0 chr5 110076555 110076594 -89553556 + (TG)n Simple_repeat Simple_repeat 1 39 0 23 33 0 0 chr5 110076827 110076857 -89553293 + AT_rich Low_complexity Low_complexity 1 30 0 408 356 77 21 chr5 110078637 110078974 -89551176 + L1MEc LINE L1 11 366 -6030 1072 293 70 49 chr5 110079367 110080526 -89549624 + L1MEc LINE L1 660 1793 -4422 1119 102 57 0 chr5 110080526 110080703 -89549447 + L1MA3 LINE L1 6115 6301 -4 1072 293 70 49 chr5 110080703 110081927 -89548223 + L1MEc LINE L1 1793 3104 -3111 11564 217 40 29 chr5 110081932 110087628 -89542522 + L1PA13 LINE L1 371 6206 -14 584 68 0 0 chr5 110087629 110087734 -89542416 - AluY SINE Alu 0 316 212 205 175 25 0 chr5 110088293 110088333 -89541817 + GA-rich Low_complexity Low_complexity 3 43 0 193 346 20 10 chr5 110089621 110089722 -89540428 - L2 LINE L2 -460 2854 2753 774 356 78 16 chr5 110090141 110090512 -89539638 - LTR16C LTR ERVL -4 487 94 1080 237 19 66 chr5 110090904 110091222 -89538928 + MLT1A1 LTR MaLR 1 373 -55 2114 184 41 12 chr5 110091407 110091825 -89538325 - Tigger2a DNA MER2_type -4 430 1 25 51 0 0 chr5 110092433 110092472 -89537678 + AT_rich Low_complexity Low_complexity 1 39 0 263 337 33 0 chr5 110093392 110093484 -89536666 + MIR SINE MIR 12 106 -156 812 264 168 22 chr5 110093517 110094066 -89536084 - L2 LINE L2 0 3313 2691 591 159 95 8 chr5 110094068 110094194 -89535956 - L1MA7 LINE L1 -147 6144 6008 189 171 0 0 chr5 110094223 110094258 -89535892 + (CATA)n Simple_repeat Simple_repeat 3 37 0 257 314 23 0 chr5 110094323 110094409 -89535741 - L2 LINE L2 -609 2705 2618 627 201 179 11 chr5 110094409 110094527 -89535623 + MER3 DNA MER1_type 1 98 -111 207 0 0 0 chr5 110094527 110094550 -89535600 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 627 201 179 11 chr5 110094550 110094610 -89535540 + MER3 DNA MER1_type 98 209 0 204 267 0 0 chr5 110094833 110094878 -89535272 + (TA)n Simple_repeat Simple_repeat 1 45 0 415 241 28 9 chr5 110094880 110094988 -89535162 - MLT2D LTR ERVL -60 354 245 606 183 122 24 chr5 110095503 110095625 -89534525 + MLT2D LTR ERVL 235 378 -36 267 31 0 0 chr5 110095625 110095657 -89534493 + (CA)n Simple_repeat Simple_repeat 2 33 0 606 183 122 24 chr5 110095657 110095698 -89534452 + MLT2D LTR ERVL 378 414 0 793 338 0 0 chr5 110096943 110097162 -89532988 - HERVL74 LTR ERVL -5050 635 417 473 206 0 49 chr5 110097427 110097529 -89532621 - HERVL74 LTR ERVL -5581 104 8 2000 192 40 24 chr5 110097536 110097989 -89532161 - MER74C LTR ERVL 0 460 1 288 337 53 53 chr5 110098294 110098463 -89531687 - MIR3 SINE MIR -18 190 22 290 214 146 39 chr5 110098677 110098780 -89531370 + L2 LINE L2 2719 2832 -482 220 295 45 89 chr5 110099065 110099177 -89530973 + L2 LINE L2 3199 3305 -8 248 298 43 43 chr5 110099345 110099439 -89530711 + MIR SINE MIR 14 107 -155 21 57 0 0 chr5 110100514 110100549 -89529601 + AT_rich Low_complexity Low_complexity 1 35 0 594 287 81 40 chr5 110101503 110101868 -89528282 + MLT1G LTR MaLR 13 395 -195 250 323 40 0 chr5 110102019 110102143 -89528007 + MLT1G LTR MaLR 462 590 0 3008 57 3 3 chr5 110102220 110102605 -89527545 - L1PA7 LINE L1 -11 6143 5759 250 35 0 0 chr5 110102605 110102634 -89527516 + L1P LINE L1 2467 2495 -3651 272 269 200 19 chr5 110103910 110104070 -89526080 - MIR SINE MIR -8 254 66 22 0 0 0 chr5 110104659 110104681 -89525469 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 110105270 110105300 -89524850 + AT_rich Low_complexity Low_complexity 1 30 0 1133 264 34 80 chr5 110105778 110106317 -89523833 - MLT1H1 LTR MaLR -41 514 3 435 284 82 63 chr5 110106781 110107319 -89522831 + L1MEc LINE L1 1268 1815 -4581 202 250 39 0 chr5 110107340 110107392 -89522758 + GA-rich Low_complexity Low_complexity 6 59 0 258 105 0 0 chr5 110107595 110107633 -89522517 + (TG)n Simple_repeat Simple_repeat 2 39 0 551 156 104 13 chr5 110107715 110107869 -89522281 - Charlie1 DNA MER1_type -1 2760 2593 2060 146 9 0 chr5 110107869 110108198 -89521952 - L1PA16 LINE L1 -439 5727 5396 2404 142 0 67 chr5 110108198 110108282 -89521868 + L1PA16 LINE L1 5744 5832 -334 1958 122 0 4 chr5 110108282 110108552 -89521598 + AluSx SINE Alu 3 271 -41 190 0 0 62 chr5 110108558 110108590 -89521560 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2404 142 0 67 chr5 110108590 110108944 -89521206 + L1PA16 LINE L1 5837 6163 -3 388 300 99 21 chr5 110109820 110110053 -89520097 - L1ME2 LINE L1 -13 6151 5901 557 229 0 59 chr5 110110113 110110266 -89519884 - Charlie1 DNA MER1_type -204 2557 2414 344 275 28 9 chr5 110110312 110110421 -89519729 + MER63 DNA MER1_type 680 1642 -46 243 257 64 127 chr5 110110426 110110897 -89519253 - L1MEd LINE L1 -5084 1035 597 2219 111 19 32 chr5 110110897 110111266 -89518884 + THE1B LTR MaLR 1 364 0 243 257 64 127 chr5 110111266 110111307 -89518843 - L1MEd LINE L1 -5522 597 555 213 39 0 0 chr5 110111640 110111666 -89518484 + (T)n Simple_repeat Simple_repeat 1 26 0 318 250 42 31 chr5 110111703 110111799 -89518351 + L1MC3 LINE L1 6773 6869 -916 * 2822 211 37 96 chr5 110111792 110111827 -89518323 - L1MC3 LINE L1 -477 7588 7552 2576 177 43 4 chr5 110111827 110112291 -89517859 - MER66B LTR ERV1 0 486 5 2822 211 37 96 chr5 110112291 110112955 -89517195 - L1MC3 LINE L1 -513 7552 6907 261 74 0 56 chr5 110112955 110113009 -89517141 - LTR66 LTR ERVL -171 439 389 2822 211 37 96 chr5 110113009 110113252 -89516898 - L1MC3 LINE L1 -1158 6907 6651 30 27 0 0 chr5 110113311 110113348 -89516802 + AT_rich Low_complexity Low_complexity 1 37 0 283 220 0 0 chr5 110113410 110113469 -89516681 - L1MC3 LINE L1 -1420 6645 6587 2071 253 95 47 chr5 110113481 110114420 -89515730 - L1MC3 LINE L1 -743 5683 4791 1820 164 67 21 chr5 110114420 110114793 -89515357 - MLT1B LTR MaLR 0 390 1 2071 253 95 47 chr5 110114793 110116026 -89514124 - L1MC3 LINE L1 -1635 4791 2530 1061 230 98 82 chr5 110116145 110116635 -89513515 - L1MC3 LINE L1 -3983 2443 1962 321 149 60 0 chr5 110116635 110116702 -89513448 - L1MB1 LINE L1 -4 6164 6094 1061 230 98 82 chr5 110116702 110117646 -89512504 - L1MC3 LINE L1 -4464 1962 904 237 241 19 0 chr5 110117724 110117778 -89512372 + CT-rich Low_complexity Low_complexity 4 58 0 33 56 0 0 chr5 110118585 110118639 -89511511 + AT_rich Low_complexity Low_complexity 1 54 0 709 157 0 50 chr5 110120645 110120785 -89509365 + AluJo/FLAM SINE Alu 1 133 -169 244 209 0 0 chr5 110120786 110120829 -89509321 + AluJo/FLAM SINE Alu 129 171 -132 1421 112 5 0 chr5 110120829 110121034 -89509116 + AluSq SINE Alu 107 312 -1 621 340 42 0 chr5 110121534 110121746 -89508404 + MER58A DNA MER1_type 4 224 0 215 266 149 21 chr5 110121761 110121855 -89508295 + MIR3 SINE MIR 66 171 -37 30 45 0 0 chr5 110122000 110122044 -89508106 + AT_rich Low_complexity Low_complexity 1 44 0 285 315 8 8 chr5 110122173 110122300 -89507850 - MER104 DNA Tc2 -5 175 49 313 335 88 47 chr5 110122471 110122641 -89507509 - L2 LINE L2 -1746 1568 1392 2242 114 0 3 chr5 110123012 110123320 -89506830 + AluSc SINE Alu 1 307 -2 230 93 0 47 chr5 110123382 110123425 -89506725 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 967 205 69 109 chr5 110124325 110124701 -89505449 - MER57A LTR ERV1 0 403 43 830 312 22 36 chr5 110124706 110125065 -89505085 - MER57-int LTR ERV1 -390 7147 6794 1000 253 24 73 chr5 110126120 110126528 -89503622 - MER57-int LTR ERV1 -1356 6181 4888 2261 240 55 63 chr5 110126885 110127894 -89502256 - MER57-int LTR ERV1 -1766 5771 4772 284 175 18 0 chr5 110127938 110127995 -89502155 - MER57-int LTR ERV1 -2206 4125 4068 1135 203 25 4 chr5 110128968 110129204 -89500946 + AluJo SINE Alu 1 241 -71 232 290 58 51 chr5 110129279 110129417 -89500733 - L2 LINE L2 -8 3305 3167 21 0 0 0 chr5 110129741 110129762 -89500388 + AT_rich Low_complexity Low_complexity 1 21 0 325 325 36 55 chr5 110131668 110131997 -89498153 + L1MC4a LINE L1 5570 5892 -1916 2145 120 0 10 chr5 110132124 110132423 -89497727 - AluSg SINE Alu -14 296 1 262 231 8 50 chr5 110133327 110133448 -89496702 + (TATATG)n Simple_repeat Simple_repeat 4 119 0 251 297 23 8 chr5 110133494 110133622 -89496528 + (TA)n Simple_repeat Simple_repeat 1 130 0 307 306 37 30 chr5 110134194 110134328 -89495822 - MIR SINE MIR -108 154 20 2759 78 88 7 chr5 110134823 110135194 -89494956 + MLT2A1 LTR ERVL 1 410 -34 248 19 0 75 chr5 110135194 110135247 -89494903 + (TA)n Simple_repeat Simple_repeat 2 50 0 2759 78 88 7 chr5 110135247 110135286 -89494864 + MLT2A1 LTR ERVL 410 444 0 203 292 21 10 chr5 110135342 110135438 -89494712 + (TA)n Simple_repeat Simple_repeat 1 97 0 1306 205 29 35 chr5 110135498 110135877 -89494273 + MLT1D LTR MaLR 1 345 -160 792 198 15 71 chr5 110135899 110136096 -89494054 - MER3 DNA MER1_type 0 209 24 2086 152 74 40 chr5 110137360 110137780 -89492370 - Tigger2a DNA MER2_type 0 434 1 429 179 0 0 chr5 110137939 110138034 -89492116 - L1MA8 LINE L1 -4 6287 6193 624 218 45 19 chr5 110138035 110138191 -89491959 + L1MA7 LINE L1 5914 6073 -218 222 224 0 0 chr5 110138412 110138461 -89491689 - L2 LINE L2 0 3313 3265 359 335 72 29 chr5 110138736 110138945 -89491205 + L2 LINE L2 2143 2360 -954 443 267 102 39 chr5 110139604 110139810 -89490340 - MER20 DNA MER1_type 0 219 1 1773 127 28 0 chr5 110142007 110142298 -89487852 + AluSx SINE Alu 3 301 -11 181 344 0 0 chr5 110144144 110144205 -89485945 - MIR SINE MIR -5 257 197 333 360 5 21 chr5 110144238 110144427 -89485723 - MIR SINE MIR -59 203 18 42248 36 22 1 chr5 110144549 110150575 -89479575 - L1PA2 LINE L1 0 6155 1 21 71 0 0 chr5 110154716 110154758 -89475392 + AT_rich Low_complexity Low_complexity 1 42 0 2378 66 0 7 chr5 110156708 110157013 -89473137 - AluY SINE Alu -5 306 4 15016 173 20 24 chr5 110157841 110162073 -89468077 - L1MA2 LINE L1 0 7723 3508 23 0 0 0 chr5 110162242 110162265 -89467885 + AT_rich Low_complexity Low_complexity 1 23 0 31 26 0 0 chr5 110162476 110162514 -89467636 + AT_rich Low_complexity Low_complexity 1 38 0 1478 289 70 30 chr5 110162606 110163173 -89466977 + MLT1E LTR MaLR 1 590 -3 659 285 141 52 chr5 110163721 110164202 -89465948 - MLT1H1 LTR MaLR 0 555 32 3357 230 35 11 chr5 110165184 110166373 -89463777 - L1M4 LINE L1 -710 5474 4257 359 178 10 148 chr5 110166486 110166737 -89463413 - MER57A-int LTR ERV1 -2232 4099 3844 * 780 224 81 80 chr5 110166732 110167264 -89462886 - MER57A-int LTR ERV1 -2464 2472 1969 444 204 48 29 chr5 110167454 110167557 -89462593 - MER34 LTR ERV1 -305 237 133 962 223 94 47 chr5 110167656 110168122 -89462028 - MER57A-int LTR ERV1 -2784 2087 1072 523 264 152 48 chr5 110168484 110168753 -89461397 - MER57A-int LTR ERV1 -7238 299 3 1039 185 63 145 chr5 110168756 110169012 -89461138 - MER57A LTR ERV1 0 403 189 2217 82 41 7 chr5 110169012 110169304 -89460846 + AluY SINE Alu 1 302 -9 1039 185 63 145 chr5 110169304 110169441 -89460709 - MER57A LTR ERV1 -214 189 42 198 329 14 0 chr5 110170258 110170331 -89459819 - L3 LINE CR1 -465 1112 1039 8328 30 0 0 chr5 110170531 110171524 -89458626 - L1PA2 LINE L1 -1918 4228 3236 9509 33 0 0 chr5 110171524 110173462 -89456688 + L1PA2 LINE L1 4200 6155 0 212 383 58 0 chr5 110174248 110174436 -89455714 - L3 LINE CR1 -717 860 662 22 35 0 0 chr5 110174455 110174484 -89455666 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr5 110176458 110176483 -89453667 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 110176636 110176664 -89453486 + AT_rich Low_complexity Low_complexity 1 28 0 431 242 141 54 chr5 110176668 110176945 -89453205 - L1ME4a LINE L1 -31 6090 5790 31 88 0 0 chr5 110178151 110178231 -89451919 + AT_rich Low_complexity Low_complexity 1 80 0 431 305 112 21 chr5 110178690 110178923 -89451227 + MIR SINE MIR 9 262 0 439 296 17 23 chr5 110179314 110179490 -89450660 + MER5B DNA MER1_type 4 178 0 24 0 0 0 chr5 110179682 110179706 -89450444 + AT_rich Low_complexity Low_complexity 1 24 0 306 367 94 43 chr5 110181194 110181834 -89448316 + L2 LINE L2 2584 3263 -9 36 97 0 0 chr5 110181982 110182095 -89448055 + AT_rich Low_complexity Low_complexity 1 113 0 2151 126 22 25 chr5 110182813 110183178 -89446972 + THE1B LTR MaLR 1 364 0 31 68 0 0 chr5 110184541 110184600 -89445550 + AT_rich Low_complexity Low_complexity 1 59 0 189 132 0 0 chr5 110185218 110185256 -89444894 + (TG)n Simple_repeat Simple_repeat 1 38 0 1900 222 29 58 chr5 110185959 110186509 -89443641 + MER44D DNA MER2_type 3 591 -14 341 333 145 43 chr5 110186660 110186942 -89443208 - MLT1I LTR MaLR -1 408 98 188 154 19 0 chr5 110188413 110188465 -89441685 + (TA)n Simple_repeat Simple_repeat 1 53 0 21 57 0 0 chr5 110188801 110188836 -89441314 + AT_rich Low_complexity Low_complexity 1 35 0 368 336 21 36 chr5 110189446 110189586 -89440564 + MIR SINE MIR 10 147 -115 44 104 0 0 chr5 110189979 110190142 -89440008 + AT_rich Low_complexity Low_complexity 1 163 0 288 350 58 0 chr5 110190251 110190371 -89439779 - L2 LINE L2 0 3272 3146 214 309 18 0 chr5 110190380 110190435 -89439715 - L2 LINE L2 -20 3252 3197 204 40 0 0 chr5 110190589 110190614 -89439536 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 3606 158 7 0 chr5 110191744 110192351 -89437799 - L1MC1 LINE L1 -9 6324 5714 381 22 0 0 chr5 110193094 110193140 -89437010 + (TG)n Simple_repeat Simple_repeat 2 47 0 24 0 0 0 chr5 110193529 110193553 -89436597 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 110193607 110193629 -89436521 + AT_rich Low_complexity Low_complexity 1 22 0 274 290 20 10 chr5 110195132 110195232 -89434918 - MIR3 SINE MIR -1 207 107 23 33 0 0 chr5 110195273 110195303 -89434847 + AT_rich Low_complexity Low_complexity 1 30 0 1214 218 35 0 chr5 110195751 110196040 -89434110 - L1MD1 LINE L1 0 6242 5944 211 262 165 10 chr5 110196295 110196398 -89433752 + MIR SINE MIR 23 141 -67 220 290 129 11 chr5 110196940 110197033 -89433117 - L2 LINE L2 -1 3312 3209 335 338 50 6 chr5 110197723 110197883 -89432267 + LTR16C LTR ERVL 194 360 -131 409 218 68 30 chr5 110199035 110199168 -89430982 + REP3 LTR ERV 10 147 -415 253 211 64 92 chr5 110199360 110199469 -89430681 + REP3 LTR ERV 385 490 -72 1971 154 116 15 chr5 110199649 110200038 -89430112 + MSTA LTR MaLR 1 428 0 934 345 45 16 chr5 110200306 110200940 -89429210 + L2 LINE L2 2665 3313 0 2280 200 83 16 chr5 110200992 110201558 -89428592 - MER6A DNA MER2_type 0 605 2 26 30 0 0 chr5 110202630 110202663 -89427487 + AT_rich Low_complexity Low_complexity 1 33 0 32 43 0 0 chr5 110204326 110204372 -89425778 + AT_rich Low_complexity Low_complexity 1 46 0 958 252 68 63 chr5 110204870 110205282 -89424868 + MLT1D LTR MaLR 1 414 -91 381 75 0 0 chr5 110205351 110205419 -89424731 + (TCTA)n Simple_repeat Simple_repeat 1 121 0 381 75 0 0 chr5 110205419 110205472 -89424678 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 315 356 59 0 chr5 110206032 110206167 -89423983 + MIR3 SINE MIR 66 208 0 1304 248 72 37 chr5 110206766 110207254 -89422896 + MLT1D LTR MaLR 1 505 0 824 160 53 29 chr5 110207782 110207988 -89422162 - L1MC3 LINE L1 -9 7776 7566 1930 262 46 18 chr5 110207994 110208670 -89421480 + L1M4 LINE L1 4459 5153 -993 463 298 135 0 chr5 110209260 110209438 -89420712 + MIR SINE MIR 2 203 -59 1733 167 20 3 chr5 110210572 110210877 -89419273 + AluJb SINE Alu 1 310 -2 2333 77 0 0 chr5 110211319 110211606 -89418544 - AluY SINE Alu -24 287 1 1976 134 7 0 chr5 110211637 110211944 -89418206 + AluSx SINE Alu 1 309 -3 1757 139 72 31 chr5 110212104 110212464 -89417686 - THE1C LTR MaLR 0 375 1 2082 140 0 13 chr5 110213014 110213321 -89416829 + AluSx SINE Alu 1 303 -9 2061 164 24 51 chr5 110213565 110213619 -89416531 - LTR10E LTR ERV1 0 591 537 2388 91 0 0 chr5 110213619 110213927 -89416223 + AluY SINE Alu 1 308 -3 2061 164 24 51 chr5 110213927 110214446 -89415704 - LTR10E LTR ERV1 -54 537 1 21 0 0 0 chr5 110215214 110215235 -89414915 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr5 110216748 110216784 -89413366 + AT_rich Low_complexity Low_complexity 1 36 0 31 0 0 0 chr5 110216905 110216936 -89413214 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr5 110218660 110218692 -89411458 + AT_rich Low_complexity Low_complexity 1 32 0 340 346 31 31 chr5 110219064 110219191 -89410959 - L2 LINE L2 -1 3271 3145 27 62 0 0 chr5 110219238 110219286 -89410864 + AT_rich Low_complexity Low_complexity 1 48 0 28 86 0 0 chr5 110219843 110219913 -89410237 + AT_rich Low_complexity Low_complexity 1 70 0 335 307 64 14 chr5 110221821 110221961 -89408189 + MIR SINE MIR 20 166 -96 2095 116 7 0 chr5 110222029 110222323 -89407827 - AluSx SINE Alu -3 309 14 591 272 7 143 chr5 110222830 110223109 -89407041 - MIR SINE MIR -1 261 21 259 301 0 0 chr5 110223157 110223230 -89406920 - L1MC/D LINE L1 -2048 5760 5688 258 220 0 0 chr5 110223502 110223561 -89406589 - MER53 DNA DNA 0 189 131 301 194 56 0 chr5 110223587 110223659 -89406491 - MER53 DNA DNA -113 76 1 1633 198 49 0 chr5 110225713 110226041 -89404109 - MER2 DNA MER2_type 0 344 1 21 0 0 0 chr5 110227158 110227179 -89402971 + AT_rich Low_complexity Low_complexity 1 21 0 452 322 47 38 chr5 110227762 110228079 -89402071 + L1MC/D LINE L1 5404 5723 -2085 191 125 25 0 chr5 110229073 110229113 -89401037 + CT-rich Low_complexity Low_complexity 2 42 0 202 280 240 0 chr5 110229881 110229956 -89400194 + L3 LINE CR1 1250 1342 -235 2268 92 3 19 chr5 110231423 110231738 -89398412 - AluSx SINE Alu -2 310 1 355 275 109 97 chr5 110231947 110232470 -89397680 + L1ME LINE L1 204 634 -5571 552 273 108 13 chr5 110232490 110232721 -89397429 + L2 LINE L2 1194 1446 -1868 2458 299 94 30 chr5 110232735 110233862 -89396288 + L2 LINE L2 1739 2937 -377 444 278 28 35 chr5 110233897 110234041 -89396109 + L2 LINE L2 3171 3313 0 27 87 0 0 chr5 110236552 110236621 -89393529 + AT_rich Low_complexity Low_complexity 1 69 0 1939 147 3 16 chr5 110236819 110237133 -89393017 + AluSx SINE Alu 3 312 0 8597 156 10 48 chr5 110237135 110238166 -89391984 - L1P LINE L1 -1145 5001 4061 2190 97 0 61 chr5 110238166 110238495 -89391655 - AluSq SINE Alu -4 309 1 8597 156 10 48 chr5 110238495 110239186 -89390964 - L1P LINE L1 -2085 4061 3345 5675 117 17 1 chr5 110239186 110240298 -89389852 + L1PA13 LINE L1 5050 6162 -1 404 316 129 33 chr5 110240315 110241069 -89389081 + L1ME LINE L1 991 1816 -4580 32 67 0 0 chr5 110241086 110241146 -89389004 + AT_rich Low_complexity Low_complexity 1 60 0 338 286 25 25 chr5 110241282 110241443 -89388707 + L1ME LINE L1 2111 2271 -4125 1082 129 105 24 chr5 110241443 110241652 -89388498 + AluSg/x SINE Alu 84 309 -3 290 217 24 0 chr5 110241690 110241773 -89388377 + (TA)n Simple_repeat Simple_repeat 2 86 0 2324 49 0 3 chr5 110241816 110242102 -89388048 + AluY SINE Alu 1 285 -26 230 269 62 15 chr5 110242126 110242256 -89387894 + L1ME LINE L1 2353 2488 -3727 215 140 20 0 chr5 110242339 110242389 -89387761 + GA-rich Low_complexity Low_complexity 2 52 0 1198 289 67 32 chr5 110242432 110243303 -89386847 + L1ME LINE L1 2650 3550 -2665 538 301 4 20 chr5 110243512 110243758 -89386392 + L1ME LINE L1 3605 3846 -2369 594 277 102 57 chr5 110243793 110244515 -89385635 + L1ME LINE L1 3911 4665 -1550 329 198 198 10 chr5 110245087 110245183 -89384967 + MER81 DNA DNA 1 114 0 787 259 161 36 chr5 110245221 110245662 -89384488 + MLT1G LTR MaLR 95 590 0 369 0 0 0 chr5 110245781 110245822 -89384328 + (TG)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr5 110246105 110246126 -89384024 + AT_rich Low_complexity Low_complexity 1 21 0 1147 195 52 4 chr5 110248489 110248761 -89381389 + L1 LINE L1 3731 4015 -2131 * 6540 161 27 9 chr5 110248753 110249295 -89380855 + L1PB2 LINE L1 3856 4386 -1765 237 65 0 0 chr5 110249295 110249326 -89380824 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 6540 161 27 9 chr5 110249326 110251035 -89379115 + L1PB2 LINE L1 4386 6149 -2 189 297 40 0 chr5 110251536 110251610 -89378540 + MIR SINE MIR 166 242 -20 684 221 0 0 chr5 110252490 110252621 -89377529 - Tigger3(Golem) DNA MER2_type -5 3024 2894 506 304 0 7 chr5 110252665 110252803 -89377347 + MLT1L LTR MaLR 315 451 -164 1251 333 13 22 chr5 110252840 110253287 -89376863 + L2 LINE L2 2476 2918 -396 24 0 0 0 chr5 110253317 110253341 -89376809 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 110254019 110254040 -89376110 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 110255514 110255536 -89374614 + AT_rich Low_complexity Low_complexity 1 22 0 533 120 11 0 chr5 110256274 110256366 -89373784 + (CA)n Simple_repeat Simple_repeat 1 93 0 29 0 0 0 chr5 110257301 110257330 -89372820 + AT_rich Low_complexity Low_complexity 1 29 0 3886 150 44 4 chr5 110257583 110258285 -89371865 - Tigger3(Golem) DNA MER2_type -14 3015 2286 333 250 40 0 chr5 110258288 110258364 -89371786 - Tigger3(Golem) DNA MER2_type -2949 80 2 284 175 16 0 chr5 110258373 110258436 -89371714 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 28 71 0 0 chr5 110258489 110258545 -89371605 + AT_rich Low_complexity Low_complexity 1 56 0 586 216 17 0 chr5 110258600 110258716 -89371434 - MER2 DNA MER2_type -224 121 4 192 97 0 0 chr5 110259034 110259065 -89371085 + (TG)n Simple_repeat Simple_repeat 2 32 0 539 320 30 15 chr5 110260763 110260966 -89369184 - MIR SINE MIR -8 254 49 340 224 32 8 chr5 110261071 110261196 -89368954 + (TA)n Simple_repeat Simple_repeat 1 128 0 1998 203 72 8 chr5 110261318 110261806 -89368344 - L1MA9 LINE L1 0 6312 5794 249 57 0 0 chr5 110261806 110261841 -89368309 + (TG)n Simple_repeat Simple_repeat 2 36 0 984 172 9 62 chr5 110261847 110261954 -89368196 + L1 LINE L1 5062 5152 -994 1912 168 0 3 chr5 110261954 110262252 -89367898 + AluSx SINE Alu 1 297 -15 984 172 9 62 chr5 110262252 110262371 -89367779 + L1 LINE L1 5152 5276 -870 547 140 20 0 chr5 110263071 110263171 -89366979 - L1MA4 LINE L1 -6 6294 6193 26 0 0 0 chr5 110264115 110264141 -89366009 + AT_rich Low_complexity Low_complexity 1 26 0 310 235 94 0 chr5 110265063 110265148 -89365002 - MLT1H1 LTR MaLR 0 555 463 286 314 49 0 chr5 110265198 110265300 -89364850 - MLT1G1 LTR MaLR -183 412 306 338 315 81 20 chr5 110265345 110265494 -89364656 - MLT1G1 LTR MaLR -293 302 145 396 297 18 0 chr5 110265528 110265639 -89364511 + MER81 DNA DNA 2 114 0 5467 198 22 28 chr5 110266335 110267161 -89362989 - L1MC1 LINE L1 -17 6596 5767 2680 102 6 0 chr5 110267161 110267523 -89362627 - THE1B LTR MaLR 0 364 1 5467 198 22 28 chr5 110267523 110268072 -89362078 - L1MC1 LINE L1 -846 5767 5213 333 0 0 0 chr5 110268072 110268109 -89362041 + (TG)n Simple_repeat Simple_repeat 2 38 0 5467 198 22 28 chr5 110268109 110268381 -89361769 - L1MC1 LINE L1 -1400 5213 4941 8678 227 84 19 chr5 110268384 110270365 -89359785 - L1MC1 LINE L1 -1971 4455 2604 1923 165 10 0 chr5 110270365 110270662 -89359488 + 7SLRNA srpRNA srpRNA 1 300 -20 8678 227 84 19 chr5 110270662 110270689 -89359461 - L1MC1 LINE L1 -3822 2604 2580 600 119 0 0 chr5 110270689 110270798 -89359352 + (TA)n Simple_repeat Simple_repeat 1 109 0 8678 227 84 19 chr5 110270798 110272957 -89357193 - L1MC1 LINE L1 -3846 2580 16 4315 285 70 23 chr5 110273054 110275227 -89354923 + L1M3c LINE L1 5 2036 -4175 5560 205 50 56 chr5 110275273 110277026 -89353124 + L1M3c LINE L1 2810 4552 -1658 390 129 0 0 chr5 110277037 110277099 -89353051 + (TA)n Simple_repeat Simple_repeat 1 62 0 510 196 0 0 chr5 110277130 110277222 -89352928 + L1M3c LINE L1 4570 4661 -1549 395 123 0 0 chr5 110277243 110277300 -89352850 + L1M3c LINE L1 4962 5018 -1192 10845 204 40 14 chr5 110277359 110280938 -89349212 + L1M1 LINE L1 2473 6144 -1421 626 131 8 8 chr5 110280943 110281065 -89349085 + L1M LINE L1 6681 6802 -917 719 67 0 0 chr5 110282357 110282461 -89347689 - AluSg/x SINE Alu 0 312 209 232 300 63 117 chr5 110282899 110283216 -89346934 + L2 LINE L2 2455 2754 -560 2085 200 109 19 chr5 110283412 110283888 -89346262 - MER101B LTR ERV1 -51 519 1 259 369 27 18 chr5 110284213 110284324 -89345826 + L2 LINE L2 3160 3271 -1 1414 225 16 55 chr5 110287150 110287590 -89342560 + L1MA9 LINE L1 5852 6274 -38 24 32 0 0 chr5 110287697 110287728 -89342422 + AT_rich Low_complexity Low_complexity 1 31 0 211 330 87 19 chr5 110287732 110287835 -89342315 - L2 LINE L2 0 3272 3163 425 51 0 0 chr5 110289287 110289346 -89340804 + L1PA14 LINE L1 6101 6159 -2 273 304 32 40 chr5 110289369 110289494 -89340656 + MIR SINE MIR 20 143 -119 24 0 0 0 chr5 110290590 110290614 -89339536 + AT_rich Low_complexity Low_complexity 1 24 0 181 256 64 0 chr5 110290983 110291061 -89339089 + MER5C DNA MER1_type 223 305 -19 244 295 0 0 chr5 110291508 110291569 -89338581 - MER102a DNA MER1_type -1 340 280 201 293 35 0 chr5 110291836 110291894 -89338256 - L2 LINE L2 0 3272 3213 269 358 95 0 chr5 110292064 110292212 -89337938 + MER20 DNA MER1_type 52 213 -6 2184 345 152 23 chr5 110292216 110294145 -89336005 + L2 LINE L2 800 2977 -337 229 282 167 45 chr5 110294998 110295154 -89334996 - L2 LINE L2 -452 2862 2688 509 259 15 49 chr5 110295344 110295549 -89334601 - L1M4 LINE L1 -2192 3954 3757 1867 96 6 81 chr5 110295560 110295892 -89334258 - AluY SINE Alu -4 307 1 215 205 0 0 chr5 110295906 110295945 -89334205 + (TG)n Simple_repeat Simple_repeat 2 40 0 317 312 70 23 chr5 110296109 110296324 -89333826 - L1MEc LINE L1 -5382 1014 790 23 33 0 0 chr5 110296680 110296710 -89333440 + AT_rich Low_complexity Low_complexity 1 30 0 237 98 0 0 chr5 110296860 110296901 -89333249 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 245 273 0 116 chr5 110297478 110297599 -89332551 - MER102a DNA MER1_type -3 327 221 24 0 0 0 chr5 110297604 110297628 -89332522 + AT_rich Low_complexity Low_complexity 1 24 0 298 336 10 10 chr5 110297691 110297795 -89332355 - MIR3 SINE MIR -49 159 56 311 221 115 48 chr5 110298099 110298203 -89331947 + MLT1C LTR MaLR 1 111 -356 2893 157 29 2 chr5 110298203 110298682 -89331468 + LOR1a LTR ERV1 6 497 0 1251 251 46 22 chr5 110298682 110299036 -89331114 + MLT1C LTR MaLR 105 467 0 37 62 0 0 chr5 110299774 110299839 -89330311 + AT_rich Low_complexity Low_complexity 1 65 0 184 322 96 0 chr5 110300551 110300666 -89329484 - MIR SINE MIR -14 248 123 1588 220 48 75 chr5 110300711 110301274 -89328876 - LTR55 LTR ERV 0 548 1 196 269 0 19 chr5 110301683 110301726 -89328424 + MIR3 SINE MIR 154 197 -11 2420 53 3 31 chr5 110301726 110302044 -89328106 + AluY SINE Alu 1 309 -2 22 0 0 0 chr5 110304579 110304601 -89325549 + AT_rich Low_complexity Low_complexity 1 22 0 2332 100 0 0 chr5 110305451 110305762 -89324388 - AluSx SINE Alu -1 311 1 263 232 44 94 chr5 110305899 110306080 -89324070 + Charlie7 DNA MER1_type 2433 2604 -8 4962 141 85 56 chr5 110306521 110307637 -89322513 + MER52C LTR ERV1 1 1149 -129 1124 120 0 0 chr5 110307639 110307797 -89322353 + AluSx SINE Alu 1 158 -154 369 162 0 0 chr5 110307805 110307873 -89322277 + (TA)n Simple_repeat Simple_repeat 1 68 0 904 142 0 0 chr5 110307876 110308010 -89322140 + AluSx SINE Alu 158 291 -21 863 113 0 23 chr5 110308011 110308144 -89322006 + MER52C LTR ERV1 1149 1278 0 2059 132 0 22 chr5 110308417 110308736 -89321414 + AluSx SINE Alu 1 312 0 297 75 0 0 chr5 110308747 110308766 -89321384 + (CA)n Simple_repeat Simple_repeat 1 59 0 297 75 0 0 chr5 110308766 110308806 -89321344 + (CA)n Simple_repeat Simple_repeat 2 41 0 180 77 0 0 chr5 110308859 110308885 -89321265 + (CA)n Simple_repeat Simple_repeat 2 27 0 1062 182 193 38 chr5 110308970 110309234 -89320916 + MER77 LTR ERV1 297 601 -4 213 39 0 0 chr5 110310283 110310309 -89319841 + (TA)n Simple_repeat Simple_repeat 1 26 0 392 336 116 15 chr5 110310328 110310596 -89319554 - L1ME4a LINE L1 -225 5896 5602 482 303 39 39 chr5 110310968 110311146 -89319004 - MIR SINE MIR -73 189 12 200 345 22 43 chr5 110311869 110312008 -89318142 + MIR3 SINE MIR 62 197 -11 536 353 31 35 chr5 110312479 110312734 -89317416 - MIR SINE MIR -1 261 8 213 175 0 0 chr5 110312757 110312797 -89317353 + G-rich Low_complexity Low_complexity 3 42 0 24 32 0 0 chr5 110313108 110313139 -89317011 + AT_rich Low_complexity Low_complexity 1 31 0 243 0 0 0 chr5 110314291 110314318 -89315832 + (A)n Simple_repeat Simple_repeat 1 27 0 736 292 68 28 chr5 110314626 110314876 -89315274 + MLT1H1 LTR MaLR 7 266 -289 27 29 0 0 chr5 110315511 110315545 -89314605 + AT_rich Low_complexity Low_complexity 1 34 0 24 77 0 0 chr5 110315975 110316027 -89314123 + AT_rich Low_complexity Low_complexity 1 52 0 740 317 26 0 chr5 110316291 110316518 -89313632 + MIR SINE MIR 29 261 -1 25 31 0 0 chr5 110317941 110317973 -89312177 + AT_rich Low_complexity Low_complexity 1 32 0 563 269 144 10 chr5 110318691 110318892 -89311258 - MIR SINE MIR -21 241 14 435 291 37 8 chr5 110319919 110320053 -89310097 - MIR SINE MIR -69 193 56 228 346 0 0 chr5 110321070 110321151 -89308999 + MLT1J1 LTR MaLR 72 152 -294 515 318 28 48 chr5 110321158 110321447 -89308703 + MLT1J LTR MaLR 229 511 0 312 277 96 11 chr5 110322626 110322720 -89307430 + L2 LINE L2 3171 3272 0 200 94 31 0 chr5 110322735 110322767 -89307383 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 406 233 33 0 chr5 110323337 110323427 -89306723 + L1MC1 LINE L1 6224 6316 -17 295 256 60 45 chr5 110323438 110323571 -89306579 + L2 LINE L2 3150 3284 -29 6833 226 49 21 chr5 110323785 110325435 -89304715 + MER70A-int LTR ERVL 834 2530 -2493 1529 228 18 15 chr5 110325436 110325770 -89304380 + MER70A-int LTR ERVL 3262 3596 -1427 2078 233 28 25 chr5 110326463 110327033 -89303117 + MER70A-int LTR ERVL 4450 5021 -2 1460 257 30 18 chr5 110327047 110327444 -89302706 + MER70A LTR ERVL 4 405 -67 2441 72 0 0 chr5 110327908 110328213 -89301937 - AluY SINE Alu -6 305 1 35 41 0 0 chr5 110328296 110328345 -89301805 + AT_rich Low_complexity Low_complexity 1 49 0 225 206 33 60 chr5 110328505 110328689 -89301461 + (TA)n Simple_repeat Simple_repeat 2 180 0 15683 147 37 39 chr5 110329286 110330777 -89299373 + Tigger3(Golem) DNA MER2_type 2 1495 -1534 1780 142 40 7 chr5 110330777 110331079 -89299071 - AluSq SINE Alu -1 312 1 15683 147 37 39 chr5 110331079 110332208 -89297942 + Tigger3(Golem) DNA MER2_type 1495 2615 -414 2258 107 0 0 chr5 110332208 110332508 -89297642 - AluSx SINE Alu -11 301 2 15683 147 37 39 chr5 110332508 110332922 -89297228 + Tigger3(Golem) DNA MER2_type 2615 3029 0 306 0 0 0 chr5 110332925 110332959 -89297191 + (CA)n Simple_repeat Simple_repeat 2 35 0 397 313 62 62 chr5 110335267 110335542 -89294608 - L1ME4a LINE L1 -284 5837 5563 1395 183 3 70 chr5 110335595 110335907 -89294243 + AluJo SINE Alu 1 291 -11 23 0 0 0 chr5 110336429 110336452 -89293698 + AT_rich Low_complexity Low_complexity 1 23 0 24 67 0 0 chr5 110336727 110336772 -89293378 + AT_rich Low_complexity Low_complexity 1 45 0 25 0 0 0 chr5 110337134 110337159 -89292991 + AT_rich Low_complexity Low_complexity 1 25 0 16956 31 3 0 chr5 110337393 110340184 -89289966 - L1PA4 LINE L1 -2 6153 3357 690 266 65 0 chr5 110341298 110341497 -89288653 + MIR SINE MIR 45 256 -6 2115 132 98 0 chr5 110341736 110342061 -89288089 - LTR18A LTR ERVL 0 357 1 549 196 0 0 chr5 110342347 110342449 -89287701 - HERVL18 LTR ERVL 0 6047 5946 322 271 0 0 chr5 110342449 110342508 -89287642 - HERVL18 LTR ERVL -780 5267 5209 602 141 22 0 chr5 110342508 110342600 -89287550 - HERVL18 LTR ERVL -1559 4488 4395 5354 175 6 2 chr5 110342603 110343462 -89286688 - HERVL18 LTR ERVL -2468 3579 2718 1448 112 22 2 chr5 110343459 110343730 -89286420 - HERVL18 LTR ERVL -3595 2452 2119 * 1943 215 36 11 chr5 110343729 110344336 -89285814 - HERVL18 LTR ERVL -4237 1810 1124 1581 224 0 27 chr5 110344339 110344670 -89285480 - HERVL18 LTR ERVL -5631 416 95 2500 128 17 0 chr5 110344694 110345045 -89285105 - LTR18A LTR ERVL 0 357 1 1498 171 4 8 chr5 110345081 110345344 -89284806 - MER50 LTR ERV1 -37 697 436 1103 111 120 44 chr5 110345340 110345565 -89284585 - MER50 LTR ERV1 -492 242 1 * 1120 304 118 11 chr5 110345667 110346134 -89284016 + LTR40a LTR ERVL 3 519 0 2548 201 46 49 chr5 110347081 110347713 -89282437 + L1MB7 LINE L1 4882 5501 -683 1760 210 87 20 chr5 110347713 110348151 -89281999 + MLT1C LTR MaLR 1 467 0 2548 201 46 49 chr5 110348151 110348548 -89281602 + L1MB7 LINE L1 5501 5898 -286 3733 167 7 15 chr5 110348557 110349016 -89281134 - LTR9 LTR ERV1 0 612 158 2061 129 0 10 chr5 110349016 110349354 -89280796 - AluSx SINE Alu 0 312 3 3733 167 7 15 chr5 110349354 110349510 -89280640 - LTR9 LTR ERV1 -454 158 2 3575 141 14 16 chr5 110349511 110350084 -89280066 - HUERS-P3 LTR ERV1 -1 8918 8347 786 140 0 0 chr5 110350077 110350191 -89279959 - HUERS-P3 LTR ERV1 -6342 2577 2464 * 11482 155 15 23 chr5 110350250 110352722 -89277428 - HUERS-P3 LTR ERV1 -5787 1631 22 1043 159 18 0 chr5 110352744 110352914 -89277236 - LTR9 LTR ERV1 0 612 440 * 3422 140 8 0 chr5 110352904 110353404 -89276746 - LTR9 LTR ERV1 -108 504 1 715 205 164 16 chr5 110353405 110353649 -89276501 + L1MB7 LINE L1 5905 6184 0 313 344 5 73 chr5 110353869 110354061 -89276089 + L1ME LINE L1 339 517 -5553 350 275 71 33 chr5 110354170 110354410 -89275740 + L1ME LINE L1 535 783 -5287 418 150 0 12 chr5 110354411 110354491 -89275659 + AluS SINE Alu 224 302 -8 3890 286 64 15 chr5 110354580 110356499 -89273651 - L1M4 LINE L1 -1528 4618 2605 669 292 0 0 chr5 110356506 110356708 -89273442 - L1M4 LINE L1 -3623 2523 2322 183 402 47 9 chr5 110357248 110357355 -89272795 + MIR SINE MIR 20 130 -78 1844 94 15 25 chr5 110357515 110357923 -89272227 - MLT2A2 LTR ERVL 0 554 149 2210 118 39 22 chr5 110357923 110358208 -89271942 + THE1B LTR MaLR 1 295 -69 2137 123 3 0 chr5 110358208 110358510 -89271640 - AluSq SINE Alu -10 303 1 2210 118 39 22 chr5 110358510 110358580 -89271570 + THE1B LTR MaLR 295 362 -2 1844 94 15 25 chr5 110358580 110358728 -89271422 - MLT2A2 LTR ERVL -405 149 1 28 48 0 0 chr5 110359653 110359695 -89270455 + AT_rich Low_complexity Low_complexity 1 42 0 35 71 0 0 chr5 110359749 110359819 -89270331 + AT_rich Low_complexity Low_complexity 1 70 0 210 71 0 0 chr5 110360128 110360156 -89269994 + (TC)n Simple_repeat Simple_repeat 1 28 0 1102 168 31 16 chr5 110362601 110362792 -89267358 - AluJo SINE Alu -30 282 89 321 135 0 0 chr5 110363753 110363805 -89266345 + (TA)n Simple_repeat Simple_repeat 1 52 0 1984 120 0 0 chr5 110364187 110364463 -89265687 + AluSx SINE Alu 1 276 -36 28 0 0 0 chr5 110364574 110364602 -89265548 + AT_rich Low_complexity Low_complexity 1 28 0 32 57 0 0 chr5 110365262 110365315 -89264835 + AT_rich Low_complexity Low_complexity 1 53 0 426 341 115 7 chr5 110366184 110366471 -89263679 + L3b LINE CR1 1183 1500 -83 355 288 13 10 chr5 110366633 110366791 -89263359 + MIR SINE MIR 8 214 -48 1467 219 30 0 chr5 110366920 110367253 -89262897 - L1MC1 LINE L1 0 6333 5991 241 395 23 12 chr5 110368675 110368761 -89261389 + L2 LINE L2 3134 3220 -52 2034 100 52 7 chr5 110368816 110369106 -89261044 - AluSg SINE Alu -7 303 1 189 0 0 0 chr5 110369766 110369787 -89260363 + (A)n Simple_repeat Simple_repeat 1 21 0 30 27 0 0 chr5 110372287 110372324 -89257826 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr5 110372499 110372521 -89257629 + AT_rich Low_complexity Low_complexity 1 22 0 1804 131 34 17 chr5 110372731 110373028 -89257122 + AluSq SINE Alu 1 302 -11 396 88 0 0 chr5 110373031 110373088 -89257062 + (GA)n Simple_repeat Simple_repeat 2 58 0 27 29 0 0 chr5 110373358 110373392 -89256758 + AT_rich Low_complexity Low_complexity 1 34 0 2106 133 21 24 chr5 110374505 110374881 -89255269 - THE1C LTR MaLR 0 375 1 616 301 82 37 chr5 110375772 110375825 -89254325 + L1MEc LINE L1 1084 1133 -5263 1720 175 3 3 chr5 110375825 110376111 -89254039 + AluJb SINE Alu 1 286 -26 616 301 82 37 chr5 110376111 110376727 -89253423 + L1MEc LINE L1 1133 1783 -4613 21 0 0 0 chr5 110376751 110376772 -89253378 + AT_rich Low_complexity Low_complexity 1 21 0 368 268 86 52 chr5 110377064 110377389 -89252761 + L1MEc LINE L1 2740 3075 -3140 300 252 173 8 chr5 110377633 110377760 -89252390 + L1MDa LINE L1 1577 1724 -4816 270 250 0 0 chr5 110377840 110377920 -89252230 + L1M2 LINE L1 2385 2464 -4385 408 293 50 9 chr5 110377986 110378208 -89251942 + L1M2 LINE L1 4000 4230 -2618 515 233 88 6 chr5 110379003 110379162 -89250988 - MER3 DNA MER1_type 0 209 38 184 221 13 156 chr5 110379318 110379395 -89250755 - MIR SINE MIR -79 183 118 22 99 0 0 chr5 110380309 110380380 -89249770 + AT_rich Low_complexity Low_complexity 1 71 0 2128 118 7 20 chr5 110380490 110380847 -89249303 - L1MC/D LINE L1 -537 5626 5310 1276 175 35 4 chr5 110380949 110381177 -89248973 + MER41D LTR ERV1 323 557 0 1849 216 59 19 chr5 110381339 110381816 -89248334 - MER74A LTR ERVL -62 496 1 253 209 0 0 chr5 110381906 110381949 -89248201 + AluSc SINE Alu 130 172 -127 2106 103 0 3 chr5 110382051 110382342 -89247808 + AluSq SINE Alu 22 311 -2 1028 148 0 0 chr5 110383118 110383280 -89246870 + FRAM SINE Alu 5 166 0 409 160 0 19 chr5 110383284 110383368 -89246782 - MLT1A1 LTR MaLR -243 122 38 1693 232 71 19 chr5 110384061 110384583 -89245567 + MER90 LTR ERV1 66 614 0 8094 157 10 1 chr5 110384790 110386208 -89243942 - L1P LINE L1 -1022 5124 3695 227 261 15 0 chr5 110388204 110388269 -89241881 + MER103 DNA DNA 99 164 -2 23 0 0 0 chr5 110389246 110389269 -89240881 + AT_rich Low_complexity Low_complexity 1 23 0 501 178 40 0 chr5 110389466 110389567 -89240583 + AluJb SINE Alu 185 289 -23 225 0 0 0 chr5 110389569 110389594 -89240556 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 246 383 26 31 chr5 110389612 110389839 -89240311 - L2 LINE L2 -338 2976 2751 255 170 0 0 chr5 110390101 110390148 -89240002 + GA-rich Low_complexity Low_complexity 2 48 0 258 388 8 0 chr5 110391500 110391621 -89238529 + MLT1J LTR MaLR 30 151 -360 305 330 140 5 chr5 110392003 110392203 -89237947 + MLT1J LTR MaLR 115 341 -170 1570 127 79 26 chr5 110392348 110392642 -89237508 + AluSx SINE Alu 3 310 0 27 29 0 0 chr5 110392929 110392963 -89237187 + AT_rich Low_complexity Low_complexity 1 34 0 1962 138 10 0 chr5 110393134 110393425 -89236725 + AluSx SINE Alu 1 294 -18 21 36 0 0 chr5 110393528 110393556 -89236594 + AT_rich Low_complexity Low_complexity 1 28 0 221 221 15 15 chr5 110393578 110393646 -89236504 + T-rich Low_complexity Low_complexity 4 71 0 257 283 0 0 chr5 110393690 110393782 -89236368 - L1 LINE L1 -3111 3035 2944 189 0 0 0 chr5 110393786 110393807 -89236343 + (T)n Simple_repeat Simple_repeat 1 21 0 282 278 26 68 chr5 110394587 110394778 -89235372 - L1 LINE L1 -3111 3035 2853 415 264 55 55 chr5 110394918 110395297 -89234853 - L1 LINE L1 -3418 2728 2350 376 294 107 52 chr5 110396093 110396750 -89233400 - HAL1b LINE L1 -613 735 43 28 61 0 0 chr5 110396753 110396802 -89233348 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr5 110396840 110396861 -89233289 + AT_rich Low_complexity Low_complexity 1 21 0 297 207 3 71 chr5 110397158 110397292 -89232858 - L1MC4 LINE L1 -8 8003 7880 227 222 0 0 chr5 110397342 110397387 -89232763 + CT-rich Low_complexity Low_complexity 2 46 0 423 329 53 33 chr5 110398969 110399356 -89230794 - LTR33 LTR ERVL 0 521 81 24 32 0 0 chr5 110400800 110400831 -89229319 + AT_rich Low_complexity Low_complexity 1 31 0 185 105 0 26 chr5 110401116 110401154 -89228996 + (GA)n Simple_repeat Simple_repeat 2 38 0 3231 158 35 59 chr5 110401245 110401990 -89228160 - LTR8A LTR ERV1 0 727 1 252 59 0 0 chr5 110402213 110402247 -89227903 + (TG)n Simple_repeat Simple_repeat 1 34 0 476 226 9 17 chr5 110402765 110402880 -89227270 + L1 LINE L1 899 1012 -5129 838 195 38 0 chr5 110402890 110403049 -89227101 + L1PA13 LINE L1 1 165 -6622 350 163 116 0 chr5 110403043 110403129 -89227021 + L1 LINE L1 3716 3811 -2399 * 4550 151 41 24 chr5 110403130 110403999 -89226151 + Tigger3b DNA MER2_type 2 885 -346 1261 204 20 92 chr5 110405764 110406157 -89223993 - MLT1A1 LTR MaLR 0 365 1 2795 13 0 0 chr5 110407156 110407467 -89222683 - AluYb8 SINE Alu -7 311 1 22 0 0 0 chr5 110408739 110408761 -89221389 + AT_rich Low_complexity Low_complexity 1 22 0 1271 253 155 7 chr5 110410047 110410474 -89219676 + MLT1D LTR MaLR 16 505 0 930 288 100 43 chr5 110411050 110411832 -89218318 - L1M4 LINE L1 -823 5323 4498 464 305 82 47 chr5 110412013 110412607 -89217543 - L1M4 LINE L1 -1897 4249 3635 21 0 0 0 chr5 110412937 110412958 -89217192 + AT_rich Low_complexity Low_complexity 1 21 0 248 323 16 32 chr5 110413827 110413951 -89216199 + MIR SINE MIR 68 189 -73 244 322 165 0 chr5 110414779 110414900 -89215250 - MIR SINE MIR -102 160 20 62 44 0 0 chr5 110416419 110416509 -89213641 + AT_rich Low_complexity Low_complexity 1 90 0 2512 45 0 13 chr5 110417315 110417625 -89212525 - AluY SINE Alu -5 306 1 2007 110 0 10 chr5 110418339 110418629 -89211521 + AluSx SINE Alu 15 301 -11 38 22 0 0 chr5 110418832 110418877 -89211273 + AT_rich Low_complexity Low_complexity 1 45 0 3767 158 102 16 chr5 110419192 110419921 -89210229 - MER54B LTR ERVL -2 791 1 251 321 18 0 chr5 110419934 110420043 -89210107 + CT-rich Low_complexity Low_complexity 1 111 0 258 337 54 18 chr5 110421269 110421435 -89208715 + MIR SINE MIR 91 262 0 188 258 54 75 chr5 110421561 110421654 -89208496 + L2 LINE L2 2287 2377 -937 1675 180 13 10 chr5 110422746 110423051 -89207099 + AluSx SINE Alu 2 307 -5 25 0 0 0 chr5 110424085 110424110 -89206040 + AT_rich Low_complexity Low_complexity 1 25 0 477 318 31 0 chr5 110424769 110424898 -89205252 + MIR SINE MIR 4 136 -126 6660 170 80 18 chr5 110424940 110426337 -89203813 + L1MB3 LINE L1 27 1509 -4875 1993 196 50 48 chr5 110426329 110426830 -89203320 - L1M4c LINE L1 -5534 850 349 * 9640 228 37 32 chr5 110426829 110426900 -89203250 + L1MB3 LINE L1 1519 1588 -4831 204 40 0 0 chr5 110426900 110426925 -89203225 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 9640 228 37 32 chr5 110426925 110430695 -89199455 + L1MB3 LINE L1 1588 5339 -1080 2199 191 36 5 chr5 110430695 110431108 -89199042 - MSTB LTR MaLR 0 426 1 5690 77 14 69 chr5 110431109 110431983 -89198167 + LTR12 LTR ERV1 1 826 0 9640 228 37 32 chr5 110431983 110433021 -89197129 + L1MB3 LINE L1 5338 6419 0 232 200 32 42 chr5 110433098 110433193 -89196957 + (TTATA)n Simple_repeat Simple_repeat 5 98 0 664 218 118 14 chr5 110433254 110433474 -89196676 + MER5C DNA MER1_type 1 243 -81 241 292 42 62 chr5 110433766 110433862 -89196288 - L2 LINE L2 -40 3232 3139 21 0 0 0 chr5 110434893 110434914 -89195236 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr5 110435103 110435142 -89195008 + AT_rich Low_complexity Low_complexity 1 39 0 28 29 0 0 chr5 110436254 110436289 -89193861 + AT_rich Low_complexity Low_complexity 1 35 0 269 51 26 0 chr5 110436714 110436753 -89193397 + (CA)n Simple_repeat Simple_repeat 2 41 0 1093 139 0 0 chr5 110437160 110437318 -89192832 - U1 snRNA snRNA -4 161 4 1118 260 42 51 chr5 110438777 110439324 -89190826 + MLT1E LTR MaLR 1 593 0 1608 127 112 32 chr5 110439458 110439805 -89190345 + THE1C LTR MaLR 1 375 0 9373 133 38 16 chr5 110439807 110441311 -89188839 + THE1C-int LTR MaLR 3 1544 -36 2202 113 0 3 chr5 110441311 110441612 -89188538 + AluY SINE Alu 1 300 -11 9373 133 38 16 chr5 110441612 110441650 -89188500 + THE1C-int LTR MaLR 1544 1580 0 1997 109 95 17 chr5 110441650 110441998 -89188152 + THE1C LTR MaLR 1 375 0 534 344 77 26 chr5 110442910 110443262 -89186888 + MLT1I LTR MaLR 32 401 -8 331 371 67 7 chr5 110443330 110443507 -89186643 + MIR SINE MIR 8 192 -65 423 92 0 0 chr5 110443788 110443849 -89186301 + (TG)n Simple_repeat Simple_repeat 1 126 0 423 92 0 0 chr5 110443849 110443914 -89186236 + (TG)n Simple_repeat Simple_repeat 2 66 0 22 0 0 0 chr5 110444244 110444266 -89185884 + AT_rich Low_complexity Low_complexity 1 22 0 302 261 43 22 chr5 110444478 110444570 -89185580 - L1MC4 LINE L1 -1339 6703 6610 295 182 26 0 chr5 110444571 110444648 -89185502 + (TA)n Simple_repeat Simple_repeat 2 80 0 21 0 0 0 chr5 110444678 110444699 -89185451 + AT_rich Low_complexity Low_complexity 1 21 0 226 227 13 27 chr5 110445744 110445819 -89184331 + (TA)n Simple_repeat Simple_repeat 1 74 0 249 65 0 0 chr5 110446052 110446083 -89184067 + LOR1b LTR ERV1 1 31 -430 421 282 90 13 chr5 110446255 110446411 -89183739 + LOR1a LTR ERV1 312 479 -18 741 174 0 8 chr5 110447091 110447223 -89182927 - FLAM_C SINE Alu 0 133 3 1681 153 31 34 chr5 110447256 110447550 -89182600 + AluJo SINE Alu 1 293 -19 1094 262 91 34 chr5 110447921 110448330 -89181820 + MLT1D LTR MaLR 19 450 -55 822 264 110 110 chr5 110448331 110448884 -89181266 + L1MB7 LINE L1 753 1305 -5554 * 3415 220 32 24 chr5 110448877 110449675 -89180475 + L1MB7 LINE L1 5968 6777 -218 2004 139 0 14 chr5 110449675 110449969 -89180181 + AluSx SINE Alu 1 290 -22 3415 220 32 24 chr5 110449969 110450181 -89179969 + L1MB7 LINE L1 6777 6986 -9 24 0 0 0 chr5 110450302 110450326 -89179824 + AT_rich Low_complexity Low_complexity 1 24 0 416 249 9 25 chr5 110451736 110451864 -89178286 + MER5B DNA MER1_type 3 139 -50 180 0 0 0 chr5 110452082 110452102 -89178048 + (CCCTAA)n Simple_repeat Simple_repeat 4 23 0 21 0 0 0 chr5 110452117 110452138 -89178012 + AT_rich Low_complexity Low_complexity 1 21 0 2054 72 7 14 chr5 110452396 110452687 -89177463 - L1PA8 LINE L1 -2 6170 5882 342 311 22 0 chr5 110452790 110452880 -89177270 - MER5A DNA MER1_type -77 112 21 440 284 40 27 chr5 110452932 110453080 -89177070 + MER5B DNA MER1_type 29 178 0 23 54 0 0 chr5 110453672 110453709 -89176441 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr5 110454513 110454535 -89175615 + AT_rich Low_complexity Low_complexity 1 22 0 42751 33 22 1 chr5 110455852 110461872 -89168278 + L1PA2 LINE L1 4 6149 -6 194 0 39 0 chr5 110461880 110461906 -89168244 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 472 287 76 33 chr5 110462674 110463198 -89166952 + L1M4b LINE L1 1614 2209 -4863 314 324 56 21 chr5 110463651 110463793 -89166357 - L2 LINE L2 0 3313 3167 234 367 0 0 chr5 110464644 110464702 -89165448 - MLT1K LTR MaLR -104 484 424 2404 60 3 25 chr5 110464702 110465019 -89165131 - AluY SINE Alu -1 310 1 234 367 0 0 chr5 110465019 110465069 -89165081 - MLT1K LTR MaLR -163 425 376 297 376 94 5 chr5 110465123 110465325 -89164825 - MLT1K LTR MaLR -292 296 77 407 296 101 79 chr5 110465375 110465652 -89164498 + HAL1b LINE L1 573 855 -493 3472 58 0 7 chr5 110465752 110466203 -89163947 + LTR7 LTR ERV1 1 448 -2 16748 176 57 95 chr5 110466205 110471561 -89158589 + HERVH LTR ERV1 1 5149 -2564 1189 133 84 0 chr5 110471562 110471765 -89158385 + HERVH LTR ERV1 5600 5819 -1894 * 2364 91 42 23 chr5 110471763 110472148 -89158002 + HERVH LTR ERV1 7322 7713 0 3468 53 2 7 chr5 110472148 110472598 -89157552 + LTR7 LTR ERV1 1 448 -2 17322 131 45 18 chr5 110472967 110473255 -89156895 + L1PB1 LINE L1 3 282 -6580 5314 64 6 27 chr5 110473255 110473961 -89156189 - LTR8 LTR ERV1 0 691 1 17322 131 45 18 chr5 110473961 110476914 -89153236 + L1PB1 LINE L1 282 3332 -3530 3471 81 9 0 chr5 110476914 110477372 -89152778 + MER41A LTR ERV1 1 462 -92 11345 192 23 10 chr5 110477380 110480798 -89149352 + L1PB1 LINE L1 3329 6794 -73 823 68 0 0 chr5 110480795 110480898 -89149252 + L1P5 LINE L1 5555 5657 -494 * 278 324 35 14 chr5 110480946 110481091 -89149059 + L1MC/D LINE L1 5630 5777 -2031 1392 204 103 29 chr5 110481237 110481585 -89148565 - MLT1A2 LTR MaLR 0 374 1 22 70 0 0 chr5 110481776 110481819 -89148331 + AT_rich Low_complexity Low_complexity 1 43 0 24 32 0 0 chr5 110482003 110482034 -89148116 + AT_rich Low_complexity Low_complexity 1 31 0 303 327 0 18 chr5 110485040 110485153 -89144997 + MLT1I LTR MaLR 54 164 -245 1479 208 16 32 chr5 110485950 110486583 -89143567 - LTR28 LTR ERV1 0 1020 291 707 219 22 22 chr5 110486639 110486817 -89143333 - LTR28 LTR ERV1 -842 178 1 2191 115 7 0 chr5 110486909 110487214 -89142936 + AluSg SINE Alu 2 308 -2 256 304 0 0 chr5 110487925 110488004 -89142146 + MLT1I LTR MaLR 1 79 -330 367 266 57 16 chr5 110488171 110488295 -89141855 + MLT1I LTR MaLR 281 409 0 314 23 0 23 chr5 110489074 110489118 -89141032 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 363 319 32 32 chr5 110489171 110489328 -89140822 - MIR SINE MIR 0 262 106 25 51 0 0 chr5 110490357 110490396 -89139754 + AT_rich Low_complexity Low_complexity 1 39 0 284 48 24 0 chr5 110490891 110490933 -89139217 + (CA)n Simple_repeat Simple_repeat 2 44 0 504 250 38 12 chr5 110492308 110492468 -89137682 - L2 LINE L2 0 3313 3150 918 205 19 52 chr5 110492490 110492691 -89137459 - L1M4 LINE L1 -1272 4874 4683 2202 111 0 7 chr5 110492691 110492988 -89137162 - AluSc SINE Alu -14 295 1 918 205 19 52 chr5 110492988 110493054 -89137096 - L1M4 LINE L1 -1463 4683 4616 * 997 182 23 0 chr5 110493051 110493227 -89136923 - L1MCa LINE L1 -6217 209 30 554 314 166 45 chr5 110493257 110493703 -89136447 - L2 LINE L2 -167 3146 2624 263 272 25 0 chr5 110493721 110493802 -89136348 + LTR33 LTR ERVL 19 101 -420 1362 213 108 24 chr5 110493985 110494356 -89135794 - MLT1C LTR MaLR -1 466 65 2510 116 5 16 chr5 110494430 110494809 -89135341 + THE1C LTR MaLR 1 375 0 433 268 8 47 chr5 110494882 110495009 -89135141 - L2 LINE L2 -673 2641 2520 256 164 0 20 chr5 110495009 110495067 -89135083 - MLT2B3 LTR ERVL 0 554 459 358 264 19 6 chr5 110495072 110495231 -89134919 + (TA)n Simple_repeat Simple_repeat 1 161 0 848 293 101 25 chr5 110495236 110495601 -89134549 - L2 LINE L2 -818 2496 2104 264 244 13 0 chr5 110495601 110495679 -89134471 + (TA)n Simple_repeat Simple_repeat 1 79 0 2127 235 7 29 chr5 110495679 110496030 -89134120 - MLT2B3 LTR ERVL -22 532 196 3021 104 4 11 chr5 110496030 110496481 -89133669 + LTR7 LTR ERV1 1 448 -2 2127 235 7 29 chr5 110496481 110496673 -89133477 - MLT2B3 LTR ERVL -358 196 1 1385 288 86 19 chr5 110496675 110497244 -89132906 - L2 LINE L2 -792 2522 1916 1546 128 157 82 chr5 110497261 110497637 -89132513 - MER4A LTR ERV1 0 664 261 614 102 10 10 chr5 110497637 110497735 -89132415 - MER4A LTR ERV1 -566 98 1 5443 84 8 11 chr5 110497940 110499001 -89131149 + L1P3 LINE L1 4556 5612 -542 2389 82 0 0 chr5 110499001 110499306 -89130844 + AluY SINE Alu 1 305 -6 5443 84 8 11 chr5 110499306 110499344 -89130806 + L1P3 LINE L1 5612 5649 -505 32 26 0 0 chr5 110499743 110499782 -89130368 + AT_rich Low_complexity Low_complexity 1 39 0 252 232 148 73 chr5 110499808 110500248 -89129902 + L1M4 LINE L1 2791 3263 -2883 21 0 0 0 chr5 110501090 110501111 -89129039 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 110501139 110501164 -89128986 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr5 110501223 110501260 -89128890 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr5 110501376 110501398 -89128752 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr5 110501925 110501967 -89128183 + AT_rich Low_complexity Low_complexity 1 42 0 324 229 69 90 chr5 110502004 110502148 -89128002 + L1M4b LINE L1 11 151 -6708 310 211 26 13 chr5 110502148 110502224 -89127926 - L2 LINE L2 -718 2596 2520 258 110 19 31 chr5 110502224 110502292 -89127858 - MLT2B3 LTR ERVL 0 554 456 213 235 0 0 chr5 110502297 110502382 -89127768 + (TA)n Simple_repeat Simple_repeat 1 85 0 360 203 51 0 chr5 110502426 110502584 -89127566 + (TA)n Simple_repeat Simple_repeat 1 166 0 335 252 10 39 chr5 110502699 110502802 -89127348 - LTR28 LTR ERV1 -5 1015 916 2659 76 100 5 chr5 110502804 110503213 -89126937 - LTR7 LTR ERV1 -2 448 1 2119 104 56 13 chr5 110503213 110503587 -89126563 - HERVH LTR ERV1 0 7713 7324 1274 129 23 9 chr5 110503587 110503804 -89126346 - HERVH LTR ERV1 -1894 5819 5600 4173 136 0 1 chr5 110503808 110504468 -89125682 - HERVH LTR ERV1 -2567 5146 4488 3245 101 4 6 chr5 110504470 110504973 -89125177 - HERVH LTR ERV1 -3720 3993 3492 838 149 20 0 chr5 110504963 110505111 -89125039 - HERVH LTR ERV1 -4423 3290 3140 * 15238 102 13 20 chr5 110505105 110507997 -89122153 - HERVH LTR ERV1 -4726 2987 1 2548 95 100 5 chr5 110507999 110508408 -89121742 - LTR7 LTR ERV1 -2 448 1 1529 199 115 112 chr5 110508410 110509124 -89121026 - LTR1B LTR ERV1 -110 716 1 29071 158 58 36 chr5 110509125 110515796 -89114354 - LTR1B-int LTR ERV1 0 7091 211 478 286 34 29 chr5 110515796 110515971 -89114179 + L1M4b LINE L1 229 404 -6455 367 280 0 56 chr5 110516819 110516926 -89113224 - L2 LINE L2 -4 3268 3168 384 22 0 0 chr5 110516945 110516990 -89113160 + (TA)n Simple_repeat Simple_repeat 2 46 0 253 324 63 14 chr5 110517279 110517421 -89112729 + MIR SINE MIR 72 220 -42 255 247 13 0 chr5 110517462 110517539 -89112611 + (TA)n Simple_repeat Simple_repeat 2 79 0 1755 213 93 9 chr5 110517587 110518051 -89112099 + MLT1D LTR MaLR 1 503 -2 2096 108 21 0 chr5 110518067 110518372 -89111778 + AluSq SINE Alu 1 313 0 442 309 48 39 chr5 110518592 110518799 -89111351 - MIR SINE MIR 0 262 54 1902 268 20 25 chr5 110520421 110521032 -89109118 + L1M4b LINE L1 321 928 -5927 1640 278 55 23 chr5 110521027 110521868 -89108282 + L1M4b LINE L1 1486 2353 -4606 * 3503 179 38 77 chr5 110521865 110522373 -89107777 + L1MB7 LINE L1 4946 5472 -712 1130 240 30 48 chr5 110522373 110522744 -89107406 + MLT1A1 LTR MaLR 2 365 0 3503 179 38 77 chr5 110522744 110523528 -89106622 + L1MB7 LINE L1 5472 6169 -15 22 56 0 0 chr5 110524629 110524665 -89105485 + AT_rich Low_complexity Low_complexity 1 36 0 1009 248 118 15 chr5 110525114 110525445 -89104705 + MLT1A1 LTR MaLR 1 365 0 422 350 7 0 chr5 110525814 110525951 -89104199 + LTR67 LTR ERVL 87 224 -333 4972 91 11 35 chr5 110526467 110527172 -89102978 + LTR12 LTR ERV1 1 688 0 216 82 41 20 chr5 110527355 110527404 -89102746 + (TTATA)n Simple_repeat Simple_repeat 3 52 0 1017 114 0 0 chr5 110527566 110527698 -89102452 - AluY SINE Alu -179 132 1 1182 147 5 25 chr5 110527760 110527957 -89102193 - AluSg/x SINE Alu -54 258 66 2091 202 22 11 chr5 110528029 110528485 -89101665 + MER65C LTR ERV1 1 461 0 2232 84 0 0 chr5 110528770 110529079 -89101071 + AluY SINE Alu 1 309 0 21 36 0 0 chr5 110532043 110532071 -89098079 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr5 110532143 110532178 -89097972 + AT_rich Low_complexity Low_complexity 1 35 0 2204 93 7 0 chr5 110534282 110534572 -89095578 + AluSp SINE Alu 1 292 -21 255 81 0 0 chr5 110536734 110536771 -89093379 - L1MC5 LINE L1 -625 7336 7300 186 71 0 0 chr5 110536808 110536836 -89093314 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1852 122 0 64 chr5 110536838 110537134 -89093016 - AluSx SINE Alu -23 289 13 305 271 47 0 chr5 110537376 110537483 -89092667 - MIR SINE MIR 0 262 151 2564 62 0 0 chr5 110537509 110537815 -89092335 - AluY SINE Alu -5 306 1 809 225 123 95 chr5 110537881 110538314 -89091836 + MER66A LTR ERV1 96 474 -4 257 313 0 0 chr5 110538323 110538387 -89091763 - MIR SINE MIR -111 151 88 242 391 53 16 chr5 110539166 110539409 -89090741 - MIR SINE MIR -10 252 1 186 43 0 0 chr5 110540496 110540519 -89089631 + (T)n Simple_repeat Simple_repeat 1 23 0 22 0 0 0 chr5 110540532 110540554 -89089596 + AT_rich Low_complexity Low_complexity 1 22 0 7797 19 0 0 chr5 110540554 110542057 -89088093 - L1PA2 LINE L1 -1 6154 4652 1423 12 0 0 chr5 110542057 110542220 -89087930 + L1PA2 LINE L1 4471 4633 -1513 1663 181 0 17 chr5 110542644 110542937 -89087213 - AluJo SINE Alu -23 289 2 329 343 0 54 chr5 110543064 110543230 -89086920 - MIR SINE MIR -58 204 48 278 310 23 11 chr5 110543595 110543682 -89086468 + L2 LINE L2 3181 3268 -4 25 51 0 0 chr5 110545166 110545205 -89084945 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr5 110545235 110545265 -89084885 + AT_rich Low_complexity Low_complexity 1 30 0 765 179 21 0 chr5 110548462 110548602 -89081548 - MLT1E3 LTR MaLR -481 143 1 843 240 20 136 chr5 110548602 110549043 -89081107 - MLT1E3-int LTR MaLR 0 1371 982 226 326 0 11 chr5 110549176 110549268 -89080882 - MLT1E3-int LTR MaLR -488 883 793 1509 266 59 10 chr5 110549901 110550424 -89079726 - MLT1E3-int LTR MaLR -822 549 1 1649 264 54 33 chr5 110550424 110551035 -89079115 - MLT1E3 LTR MaLR 0 624 1 240 224 283 19 chr5 110551124 110551287 -89078863 + MIR SINE MIR 58 256 -6 1666 154 162 11 chr5 110551314 110551501 -89078649 + MSTA LTR MaLR 1 158 -270 1724 180 7 7 chr5 110551501 110551795 -89078355 + AluSx SINE Alu 1 294 -18 1666 154 162 11 chr5 110551795 110551809 -89078341 + MSTA LTR MaLR 158 169 -259 186 43 0 0 chr5 110551809 110551832 -89078318 + (TC)n Simple_repeat Simple_repeat 1 23 0 1666 154 162 11 chr5 110551832 110552000 -89078150 + MSTA LTR MaLR 169 427 -1 931 215 16 0 chr5 110552068 110552254 -89077896 - MER5A DNA MER1_type 0 189 1 2653 35 0 19 chr5 110553931 110554248 -89075902 - AluY SINE Alu 0 311 1 27 0 0 0 chr5 110555886 110555913 -89074237 + AT_rich Low_complexity Low_complexity 1 27 0 2755 96 36 3 chr5 110556271 110556941 -89073209 - L1MA1 LINE L1 0 6302 5546 2066 149 7 0 chr5 110557105 110557413 -89072737 + AluSq SINE Alu 1 310 -3 2111 164 9 52 chr5 110558005 110558172 -89071978 - L1MC1 LINE L1 -11 6322 6149 1602 185 60 28 chr5 110558172 110558524 -89071626 - MLT1A1 LTR MaLR -2 363 1 2111 164 9 52 chr5 110558524 110558789 -89071361 - L1MC1 LINE L1 -184 6149 5909 2076 123 3 3 chr5 110558789 110559097 -89071053 - AluSx SINE Alu -4 308 1 2111 164 9 52 chr5 110559097 110559125 -89071025 - L1MC1 LINE L1 -424 5909 5881 684 258 5 42 chr5 110559130 110559205 -89070945 - L1M4 LINE L1 -1050 5096 5020 2172 96 3 7 chr5 110559205 110559506 -89070644 - AluSg SINE Alu -10 300 1 684 258 5 42 chr5 110559506 110559643 -89070507 - L1M4 LINE L1 -1126 5020 4892 470 246 8 24 chr5 110559638 110559764 -89070386 + L1 LINE L1 4030 4153 -1993 * 3113 184 20 35 chr5 110559749 110560463 -89069687 + L1 LINE L1 4361 5063 -1083 1104 168 57 7 chr5 110560517 110560813 -89069337 - L1MA4A LINE L1 -57 7308 6937 406 200 40 60 chr5 110560837 110560937 -89069213 + MSTA LTR MaLR 331 428 0 3158 175 30 12 chr5 110560941 110562113 -89068037 - L1MA4A LINE L1 -443 6922 5732 8088 212 28 14 chr5 110562114 110564400 -89065750 - L1MA4A LINE L1 -2360 4848 2500 1962 150 10 10 chr5 110564400 110564706 -89065444 - AluSc SINE Alu -3 306 1 8088 212 28 14 chr5 110564706 110565758 -89064392 - L1MA4A LINE L1 -4708 2500 1464 315 256 100 11 chr5 110566003 110566093 -89064057 - L1MA4A LINE L1 -6435 774 677 1540 327 45 10 chr5 110566111 110566716 -89063434 - L1MA4A LINE L1 -6582 627 2 870 188 34 5 chr5 110567116 110567323 -89062827 + L1 LINE L1 5070 5282 -864 4147 160 22 22 chr5 110567353 110568180 -89061970 - L1MCa LINE L1 -5026 1400 574 2844 200 32 30 chr5 110568233 110568824 -89061326 - L1MCa LINE L1 -5815 611 20 26 0 0 0 chr5 110570798 110570824 -89059326 + AT_rich Low_complexity Low_complexity 1 26 0 2051 221 40 27 chr5 110570959 110571506 -89058644 - L1MC3 LINE L1 -15 7770 7217 * 2645 255 44 24 chr5 110571503 110573223 -89056927 + L1MB1 LINE L1 670 2262 -3950 4116 110 116 141 chr5 110573223 110574608 -89055542 + pTR5 LTR ERV1 760 2435 -3 1070 220 51 17 chr5 110574608 110574962 -89055188 + L1MB1 LINE L1 2244 2609 -3601 * 3627 204 35 32 chr5 110574959 110575103 -89055047 + L1MB1 LINE L1 5249 5391 -841 825 259 0 0 chr5 110575103 110575261 -89054889 + FAM SINE Alu 1 158 -17 2134 100 3 20 chr5 110575262 110575561 -89054589 + AluSg SINE Alu 13 306 -4 3627 204 35 32 chr5 110575561 110576389 -89053761 + L1MB1 LINE L1 5390 6232 0 23 33 0 0 chr5 110576833 110576863 -89053287 + AT_rich Low_complexity Low_complexity 1 30 0 2007 132 0 0 chr5 110576951 110577261 -89052889 - AluSx SINE Alu 0 310 1 5501 208 71 32 chr5 110578091 110579598 -89050552 + MER45R DNA AcHobo 16 1580 -1 225 81 27 0 chr5 110579966 110580003 -89050147 - MLT1J2 LTR MaLR -46 404 367 3827 273 42 10 chr5 110580188 110581472 -89048678 - L1MEc LINE L1 -5023 1373 49 206 340 119 56 chr5 110581579 110582006 -89048144 - L2 LINE L2 -1212 2102 1649 198 0 0 0 chr5 110582499 110582521 -89047629 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 616 80 20 0 chr5 110583716 110583816 -89046334 + (TC)n Simple_repeat Simple_repeat 1 102 0 1115 299 45 24 chr5 110583817 110584645 -89045505 + MER45C DNA AcHobo 14 953 0 265 273 57 0 chr5 110585130 110585218 -89044932 - MIR SINE MIR -46 216 124 879 184 56 47 chr5 110585476 110585709 -89044441 - L1MA9 LINE L1 0 6312 6078 3228 142 149 144 chr5 110585709 110587076 -89043074 + pTR5 LTR ERV1 743 2438 0 239 175 53 18 chr5 110587077 110587134 -89043016 - L1MA9 LINE L1 -229 6083 6025 2250 82 0 0 chr5 110589643 110589955 -89040195 + AluSc SINE Alu 1 312 0 425 296 54 47 chr5 110590861 110591158 -89038992 + HAL1b LINE L1 282 580 -768 31 26 0 0 chr5 110591663 110591701 -89038449 + AT_rich Low_complexity Low_complexity 1 38 0 35 78 0 0 chr5 110592272 110592349 -89037801 + AT_rich Low_complexity Low_complexity 1 77 0 217 149 68 14 chr5 110592499 110592573 -89037577 + (TA)n Simple_repeat Simple_repeat 1 78 0 2181 90 7 0 chr5 110593669 110593968 -89036182 + AluY SINE Alu 1 301 -10 801 300 64 22 chr5 110594297 110595021 -89035129 - L1ME3A LINE L1 -288 5882 5127 542 269 120 14 chr5 110595091 110595459 -89034691 - L1ME3A LINE L1 -1251 4895 4489 251 288 6 18 chr5 110599718 110599881 -89030269 + (TA)n Simple_repeat Simple_repeat 2 162 0 2137 78 0 11 chr5 110600052 110600333 -89029817 + AluSg1 SINE Alu 1 278 -31 279 0 0 0 chr5 110601828 110601859 -89028291 + (T)n Simple_repeat Simple_repeat 1 31 0 2212 99 3 0 chr5 110602715 110603009 -89027141 + AluSc SINE Alu 1 295 -14 1686 219 60 40 chr5 110603262 110603732 -89026418 - MLT1D LTR MaLR -1 504 26 309 250 0 0 chr5 110604523 110604583 -89025567 - MER2 DNA MER2_type 0 345 286 1960 122 0 10 chr5 110604603 110604897 -89025253 - AluSc SINE Alu -18 291 1 708 181 110 0 chr5 110604954 110605109 -89025041 - MER2 DNA MER2_type -134 211 40 311 291 55 18 chr5 110606143 110606253 -89023897 + MER91A DNA MER1_type 73 186 -10 22 70 0 0 chr5 110607261 110607304 -89022846 + AT_rich Low_complexity Low_complexity 1 43 0 234 315 131 31 chr5 110607439 110607569 -89022581 + LTR33 LTR ERVL 4 146 -375 275 303 26 0 chr5 110607661 110607737 -89022413 + MER2 DNA MER2_type 1 78 -267 203 260 58 98 chr5 110608417 110608590 -89021560 + MIR SINE MIR 70 235 -27 225 0 0 0 chr5 110608862 110608887 -89021263 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2364 74 7 0 chr5 110609066 110609363 -89020787 + AluSq SINE Alu 1 299 -14 27 0 0 0 chr5 110609926 110609953 -89020197 + AT_rich Low_complexity Low_complexity 1 27 0 432 55 0 0 chr5 110610887 110610942 -89019208 + (CA)n Simple_repeat Simple_repeat 1 55 0 332 308 51 8 chr5 110611180 110611297 -89018853 - L2 LINE L2 0 3313 3192 314 298 89 16 chr5 110611559 110611683 -89018467 + MER94 DNA DNA 1 133 -1 254 333 101 8 chr5 110611685 110611814 -89018336 - L2 LINE L2 -514 2800 2660 685 317 77 47 chr5 110611870 110612441 -89017709 - L2 LINE L2 -826 2488 1901 407 268 32 8 chr5 110612461 110612584 -89017566 + MIR SINE MIR 56 181 -81 537 258 17 0 chr5 110612584 110612704 -89017446 + Charlie1 DNA MER1_type 1 122 -2639 * 545 209 20 52 chr5 110612702 110612855 -89017295 + Charlie1 DNA MER1_type 1485 1632 -1129 * 1706 197 133 66 chr5 110612847 110613517 -89016633 + Charlie1 DNA MER1_type 2047 2761 0 224 266 31 0 chr5 110613595 110613659 -89016491 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 234 373 0 0 chr5 110614736 110614811 -89015339 - MIR3 SINE MIR -49 159 85 632 258 69 10 chr5 110615174 110615558 -89014592 - LTR33 LTR ERVL 0 521 17 848 281 117 17 chr5 110617270 110617569 -89012581 + MLT1I LTR MaLR 72 400 -9 2254 113 0 0 chr5 110617881 110618192 -89011958 + AluSq SINE Alu 1 311 -2 1976 136 4 0 chr5 110618598 110618910 -89011240 + AluSq SINE Alu 4 316 0 202 151 301 27 chr5 110618924 110618997 -89011153 + MIR SINE MIR 73 165 -97 1703 177 130 19 chr5 110618997 110619375 -89010775 - MSTA LTR MaLR -8 420 1 32 0 0 0 chr5 110619482 110619514 -89010636 + AT_rich Low_complexity Low_complexity 1 32 0 642 325 45 14 chr5 110619526 110619734 -89010416 - L2 LINE L2 -16 3297 3076 2153 101 3 3 chr5 110619734 110620032 -89010118 - AluY SINE Alu -13 298 1 642 325 45 14 chr5 110620032 110620112 -89010038 - L2 LINE L2 -237 3076 3000 21 36 0 0 chr5 110621946 110621974 -89008176 + AT_rich Low_complexity Low_complexity 1 28 0 221 222 0 0 chr5 110622093 110622138 -89008012 + (CA)n Simple_repeat Simple_repeat 1 45 0 24 85 0 0 chr5 110625367 110625426 -89004724 + AT_rich Low_complexity Low_complexity 1 59 0 330 264 22 0 chr5 110625592 110625683 -89004467 + MER94 DNA DNA 6 98 -36 21 0 0 0 chr5 110626117 110626138 -89004012 + AT_rich Low_complexity Low_complexity 1 21 0 399 113 0 0 chr5 110626905 110626967 -89003183 + (TA)n Simple_repeat Simple_repeat 2 63 0 326 287 53 27 chr5 110627885 110628035 -89002115 - L1MC5 LINE L1 -31 7930 7777 2352 69 7 0 chr5 110628053 110628344 -89001806 - AluY SINE Alu -18 293 1 254 265 10 10 chr5 110628391 110628493 -89001657 + (TA)n Simple_repeat Simple_repeat 2 103 0 618 182 32 19 chr5 110628626 110628780 -89001370 - L1MA7 LINE L1 -11 6280 6125 1123 163 92 44 chr5 110628848 110628945 -89001205 - L1MC5 LINE L1 -385 7576 7485 243 0 0 0 chr5 110628945 110628972 -89001178 + (TC)n Simple_repeat Simple_repeat 1 27 0 1123 163 92 44 chr5 110628972 110629169 -89000981 - L1MC5 LINE L1 -476 7485 7268 726 283 66 12 chr5 110629211 110629455 -89000695 + MIR SINE MIR 6 262 0 229 239 28 42 chr5 110630108 110630179 -88999971 + L3b LINE CR1 1345 1414 -169 22 0 0 0 chr5 110630560 110630582 -88999568 + AT_rich Low_complexity Low_complexity 1 22 0 533 213 39 32 chr5 110631919 110632074 -88998076 - L1MB4 LINE L1 -1 6179 6024 37 52 0 0 chr5 110632461 110632519 -88997631 + AT_rich Low_complexity Low_complexity 1 58 0 231 231 13 26 chr5 110633685 110633763 -88996387 - L1ME4a LINE L1 -83 6038 5962 300 276 28 61 chr5 110633776 110633957 -88996193 - L1ME4a LINE L1 -3 6118 5944 4916 115 0 0 chr5 110634368 110634749 -88995401 - L1PA15 LINE L1 0 6165 5785 216 0 0 0 chr5 110634749 110634773 -88995377 + (TA)n Simple_repeat Simple_repeat 1 24 0 4916 115 0 0 chr5 110634773 110634847 -88995303 - L1PA15 LINE L1 -380 5785 5712 414 0 0 0 chr5 110634847 110634893 -88995257 + (TG)n Simple_repeat Simple_repeat 2 47 0 4916 115 0 0 chr5 110634893 110635704 -88994446 - L1PA15 LINE L1 -452 5713 4995 2310 102 20 17 chr5 110635704 110636058 -88994092 + THE1A LTR MaLR 1 355 0 5066 99 4 15 chr5 110636058 110636431 -88993719 + THE1A-int LTR MaLR 1 364 -1216 2235 115 10 3 chr5 110636431 110636736 -88993414 - AluSc SINE Alu -2 307 1 5066 99 4 15 chr5 110636736 110637080 -88993070 + THE1A-int LTR MaLR 364 710 -870 647 85 4 92 chr5 110637080 110637195 -88992955 + THE1A LTR MaLR 263 355 0 226 178 0 0 chr5 110637195 110637240 -88992910 - L1P LINE L1 -1147 4999 4955 2058 203 4 15 chr5 110637241 110637709 -88992441 - L1 LINE L1 -1287 4859 4397 831 177 14 0 chr5 110638163 110638310 -88991840 - MSTD LTR MaLR -247 149 1 195 333 16 0 chr5 110638740 110638803 -88991347 - MIR SINE MIR -78 130 67 2177 130 13 45 chr5 110638844 110639220 -88990930 - THE1B LTR MaLR 0 364 1 10170 110 31 36 chr5 110639221 110640809 -88989341 - THE1B-int LTR MaLR -1 1579 1 2037 139 25 35 chr5 110640809 110641177 -88988973 - THE1B LTR MaLR 0 364 1 495 311 68 10 chr5 110641365 110641571 -88988579 + MIR SINE MIR 10 227 -35 238 357 132 65 chr5 110641786 110642187 -88987963 + L2 LINE L2 2805 3232 -40 464 254 39 15 chr5 110642204 110642334 -88987816 + L1ME3 LINE L1 5988 6120 -42 785 255 43 8 chr5 110642392 110642627 -88987523 + L1ME3A LINE L1 5927 6169 -1 206 170 21 0 chr5 110642645 110642692 -88987458 + (TA)n Simple_repeat Simple_repeat 2 49 0 31 44 0 0 chr5 110643565 110643610 -88986540 + AT_rich Low_complexity Low_complexity 1 45 0 24 53 0 0 chr5 110643633 110643671 -88986479 + AT_rich Low_complexity Low_complexity 1 38 0 556 333 103 21 chr5 110644107 110644398 -88985752 - MLT1J LTR MaLR -169 342 28 206 292 35 44 chr5 110645171 110645284 -88984866 - L3 LINE CR1 -69 1508 1397 213 274 98 39 chr5 110645287 110645389 -88984761 - L2 LINE L2 0 3313 3206 206 337 165 50 chr5 110645396 110645693 -88984457 - L3 LINE CR1 -177 1400 1070 245 322 187 0 chr5 110645933 110646104 -88984046 + MIR SINE MIR 49 251 -11 248 413 71 0 chr5 110646227 110646353 -88983797 - L2 LINE L2 -19 3253 3119 1575 193 3 37 chr5 110647395 110647716 -88982434 + AluJo SINE Alu 3 312 0 2478 68 0 3 chr5 110647801 110648111 -88982039 - AluY SINE Alu -2 309 1 22 0 0 0 chr5 110649657 110649679 -88980471 + AT_rich Low_complexity Low_complexity 1 22 0 1074 196 99 105 chr5 110650207 110650599 -88979551 - MER57A LTR ERV1 -9 394 5 2035 78 7 39 chr5 110650913 110651221 -88978929 - AluY SINE Alu -12 299 2 212 0 36 0 chr5 110651255 110651283 -88978867 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr5 110651771 110651793 -88978357 + AT_rich Low_complexity Low_complexity 1 22 0 244 202 21 96 chr5 110652110 110652204 -88977946 - L3b LINE CR1 -180 1403 1317 308 333 14 28 chr5 110652321 110652465 -88977685 - MIR3 SINE MIR -66 142 1 482 359 47 25 chr5 110653186 110653578 -88976572 - L2 LINE L2 -199 3073 2680 1785 107 118 4 chr5 110654321 110654584 -88975566 - AluSg1 SINE Alu -16 293 1 28 0 0 0 chr5 110657050 110657078 -88973072 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 110657176 110657199 -88972951 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr5 110658386 110658422 -88971728 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 110659176 110659197 -88970953 + AT_rich Low_complexity Low_complexity 1 21 0 220 288 38 0 chr5 110659751 110659831 -88970319 + (TA)n Simple_repeat Simple_repeat 1 83 0 2201 103 0 3 chr5 110660480 110660770 -88969380 + AluSg SINE Alu 1 289 -21 2091 118 3 16 chr5 110661082 110661397 -88968753 + AluSx SINE Alu 1 311 -1 2731 167 92 44 chr5 110661504 110662240 -88967910 + LTR1B LTR ERV1 1 777 -8 25 0 0 0 chr5 110662644 110662669 -88967481 + AT_rich Low_complexity Low_complexity 1 25 0 2805 85 0 0 chr5 110663379 110663743 -88966407 + THE1B LTR MaLR 1 364 0 218 227 0 0 chr5 110664006 110664050 -88966100 + A-rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr5 110664268 110664291 -88965859 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr5 110664913 110664939 -88965211 + (TG)n Simple_repeat Simple_repeat 2 27 0 224 316 13 40 chr5 110665252 110665328 -88964822 - MER5A DNA MER1_type -1 188 115 29 0 0 0 chr5 110666083 110666112 -88964038 + AT_rich Low_complexity Low_complexity 1 29 0 586 362 13 13 chr5 110667980 110668212 -88961938 - MIR SINE MIR -23 239 8 207 0 0 0 chr5 110668518 110668541 -88961609 + (A)n Simple_repeat Simple_repeat 1 23 0 309 89 0 0 chr5 110669152 110669197 -88960953 + (TG)n Simple_repeat Simple_repeat 2 46 0 338 348 138 7 chr5 110669599 110669881 -88960269 + L2 LINE L2 2439 2757 -557 30 27 0 0 chr5 110672735 110672772 -88957378 + AT_rich Low_complexity Low_complexity 1 37 0 1710 60 51 5 chr5 110673118 110673334 -88956816 + AluY SINE Alu 18 243 -68 450 0 0 0 chr5 110674384 110674434 -88955716 + (CA)n Simple_repeat Simple_repeat 2 51 0 2276 120 0 0 chr5 110674500 110674808 -88955342 + AluSc SINE Alu 1 308 -1 216 309 59 0 chr5 110674935 110675003 -88955147 - L2 LINE L2 -6 3307 3236 209 326 32 117 chr5 110675197 110675574 -88954576 - L2 LINE L2 -341 2973 2629 180 0 0 0 chr5 110676114 110676134 -88954016 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 24 67 0 0 chr5 110676552 110676597 -88953553 + AT_rich Low_complexity Low_complexity 1 45 0 24 53 0 0 chr5 110676726 110676764 -88953386 + AT_rich Low_complexity Low_complexity 1 38 0 2334 86 0 10 chr5 110676773 110677087 -88953063 + AluY SINE Alu 1 311 0 2163 112 7 0 chr5 110677564 110677860 -88952290 - AluSx SINE Alu -14 298 1 1388 232 60 35 chr5 110678139 110678574 -88951576 + MLT2C2 LTR ERVL 1 446 -18 1773 217 105 50 chr5 110678574 110679099 -88951051 - MLT2B3 LTR ERVL 0 554 1 361 316 30 15 chr5 110680272 110680405 -88949745 - MER5B DNA MER1_type -43 135 1 280 335 70 30 chr5 110681039 110681239 -88948911 - L2 LINE L2 0 3313 3106 4162 64 8 0 chr5 110681340 110681874 -88948276 + L1PA7 LINE L1 5617 6154 0 1319 103 39 69 chr5 110681934 110682167 -88947983 + MER30 DNA MER1_type 1 226 -4 181 319 14 14 chr5 110682709 110682781 -88947369 - L2 LINE L2 -1049 2265 2194 1820 124 11 14 chr5 110682994 110683276 -88946874 + AluSp SINE Alu 1 281 -32 180 0 0 0 chr5 110683279 110683299 -88946851 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 240 398 17 33 chr5 110683336 110683517 -88946633 - L2 LINE L2 -1297 2017 1840 1379 89 0 0 chr5 110683795 110683974 -88946176 - AluY SINE Alu -10 301 123 1202 109 29 6 chr5 110684138 110684313 -88945837 - AluY SINE Alu -132 179 1 240 263 32 63 chr5 110685662 110685757 -88944393 - MIR3 SINE MIR -31 177 86 2291 104 0 3 chr5 110685860 110686168 -88943982 + AluSc SINE Alu 1 307 -2 24 32 0 0 chr5 110686921 110686952 -88943198 + AT_rich Low_complexity Low_complexity 1 31 0 2841 10 0 0 chr5 110687241 110687552 -88942598 + AluY SINE Alu 1 311 0 23 0 0 0 chr5 110687565 110687588 -88942562 + AT_rich Low_complexity Low_complexity 1 23 0 201 204 0 23 chr5 110688176 110688220 -88941930 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 375 210 0 12 chr5 110688241 110688322 -88941828 + MER69 DNA AcHobo 1 80 -97 2486 48 0 10 chr5 110688762 110689076 -88941074 + AluY SINE Alu 1 311 0 1251 212 97 25 chr5 110689090 110689482 -88940668 + MER69 DNA AcHobo 2107 2526 0 839 246 133 64 chr5 110689626 110690098 -88940052 + MLT1D LTR MaLR 1 505 0 1881 105 0 15 chr5 110690386 110690652 -88939498 + AluSq SINE Alu 1 262 -51 1938 236 49 84 chr5 110690761 110691692 -88938458 - L1MC5 LINE L1 -491 7470 6635 442 337 93 28 chr5 110692018 110692588 -88937562 - HAL1b LINE L1 -613 735 129 1578 261 85 6 chr5 110692673 110693191 -88936959 - L1ME1 LINE L1 -9 6157 5599 204 203 17 34 chr5 110693465 110693524 -88936626 - MIR SINE MIR -10 252 195 22 56 0 0 chr5 110693569 110693605 -88936545 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 110693840 110693869 -88936281 + AT_rich Low_complexity Low_complexity 1 29 0 381 206 49 39 chr5 110696539 110696641 -88933509 + MER112 DNA MER1_type 152 254 -6 284 290 97 26 chr5 110696953 110697137 -88933013 - MIR3 SINE MIR -2 206 6 254 271 148 36 chr5 110697760 110698118 -88932032 + L1ME4a LINE L1 5721 6118 -3 213 132 0 0 chr5 110699296 110699334 -88930816 + (TTTTC)n Simple_repeat Simple_repeat 5 42 0 1807 176 3 0 chr5 110700146 110700447 -88929703 - AluSx SINE Alu -9 303 2 2090 124 14 0 chr5 110703753 110704043 -88926107 + AluSg SINE Alu 2 295 -15 21 36 0 0 chr5 110704088 110704116 -88926034 + AT_rich Low_complexity Low_complexity 1 28 0 320 233 41 14 chr5 110705709 110705782 -88924368 + L2 LINE L2 3239 3313 0 2282 160 46 20 chr5 110706135 110706793 -88923357 + LTR26E LTR ERV1 2 615 -7 194 333 205 0 chr5 110707652 110707769 -88922381 - MIR3 SINE MIR -30 178 38 26 82 0 0 chr5 110708051 110708112 -88922038 + AT_rich Low_complexity Low_complexity 1 61 0 345 377 15 87 chr5 110708219 110708612 -88921538 - L2 LINE L2 -39 3233 2869 712 323 35 4 chr5 110709377 110709603 -88920547 - MIR SINE MIR -4 258 26 247 250 62 62 chr5 110710025 110710121 -88920029 - MIR SINE MIR -50 212 117 219 274 16 0 chr5 110711431 110711493 -88918657 + MIR SINE MIR 58 120 -142 25 31 0 0 chr5 110713105 110713137 -88917013 + AT_rich Low_complexity Low_complexity 1 32 0 276 313 42 0 chr5 110713752 110713848 -88916302 + L2 LINE L2 3161 3260 -12 780 295 69 0 chr5 110715142 110715359 -88914791 - MIR SINE MIR 0 262 31 784 245 50 55 chr5 110715541 110715884 -88914266 + Charlie8 DNA MER1_type 59 399 -2018 215 304 0 0 chr5 110716292 110716371 -88913779 + (CA)n Simple_repeat Simple_repeat 2 80 0 259 289 0 13 chr5 110717466 110717542 -88912608 + CT-rich Low_complexity Low_complexity 3 77 0 256 229 57 107 chr5 110717547 110717607 -88912543 - L2 LINE L2 -23 3290 3229 1757 185 45 21 chr5 110717607 110717985 -88912165 - MLT1B LTR MaLR -3 387 1 256 229 57 107 chr5 110717985 110718064 -88912086 - L2 LINE L2 -84 3229 3158 253 235 86 12 chr5 110718127 110718208 -88911942 + MIR3 SINE MIR 118 204 -4 344 333 167 14 chr5 110719138 110719348 -88910802 - MIR SINE MIR 0 262 21 448 261 15 37 chr5 110719750 110719884 -88910266 - L2 LINE L2 -4 3309 3179 247 149 21 0 chr5 110720455 110720502 -88909648 + (TA)n Simple_repeat Simple_repeat 2 49 0 2227 110 0 0 chr5 110721128 110721436 -88908714 + AluSg1 SINE Alu 1 308 -1 1475 227 110 50 chr5 110721499 110722175 -88907975 - L1ME3A LINE L1 -7 6163 5529 2083 129 56 6 chr5 110722175 110722532 -88907618 - THE1C LTR MaLR 0 375 1 1475 227 110 50 chr5 110722532 110722683 -88907467 - L1ME3A LINE L1 -641 5529 5389 6517 119 26 20 chr5 110722683 110723747 -88906403 - MER11C LTR ERVK 0 1071 1 1475 227 110 50 chr5 110723747 110723774 -88906376 - L1ME3A LINE L1 -781 5389 5208 593 275 54 61 chr5 110724392 110724742 -88905408 - MLT1L LTR MaLR -67 527 108 25 31 0 0 chr5 110724843 110724875 -88905275 + AT_rich Low_complexity Low_complexity 1 32 0 334 211 211 18 chr5 110725008 110725179 -88904971 - L1MC4 LINE L1 -1251 6791 6588 186 189 0 0 chr5 110725179 110725216 -88904934 + (CATA)n Simple_repeat Simple_repeat 2 38 0 1011 79 0 29 chr5 110725234 110725374 -88904776 - AluY SINE Alu -19 292 157 405 259 30 1 chr5 110725378 110725515 -88904635 - L1MC4 LINE L1 -1408 6592 6444 21 95 0 0 chr5 110726006 110726069 -88904081 + AT_rich Low_complexity Low_complexity 1 63 0 1289 270 75 84 chr5 110727400 110727986 -88902164 + L2 LINE L2 1327 1906 -1408 2395 75 0 28 chr5 110727986 110728306 -88901844 + AluSp SINE Alu 2 312 -1 1289 270 75 84 chr5 110728306 110728527 -88901623 + L2 LINE L2 1906 2127 -1187 212 179 0 0 chr5 110728625 110728664 -88901486 + T-rich Low_complexity Low_complexity 1 39 0 622 288 110 32 chr5 110728678 110728959 -88901191 + L2 LINE L2 3011 3313 0 23 33 0 0 chr5 110729513 110729543 -88900607 + AT_rich Low_complexity Low_complexity 1 30 0 187 299 52 62 chr5 110729616 110729713 -88900437 + MIR SINE MIR 52 147 -115 653 278 5 11 chr5 110729733 110729920 -88900230 + MER117 DNA MER1_type 9 194 -3 277 184 0 0 chr5 110729920 110729969 -88900181 + MIR3 SINE MIR 151 199 -9 24 32 0 0 chr5 110730112 110730143 -88900007 + AT_rich Low_complexity Low_complexity 1 31 0 184 306 0 48 chr5 110731017 110731079 -88899071 - L3 LINE CR1 -1 1576 1518 282 304 163 7 chr5 110732050 110732185 -88897965 - MIR3 SINE MIR -48 160 5 1699 153 0 0 chr5 110734149 110734411 -88895739 + AluY SINE Alu 44 305 -6 190 244 0 0 chr5 110735480 110735525 -88894625 + MER5A DNA MER1_type 142 186 -3 429 239 106 9 chr5 110737460 110737573 -88892577 + MIR3 SINE MIR 85 208 0 219 103 0 0 chr5 110738040 110738079 -88892071 + (T)n Simple_repeat Simple_repeat 1 39 0 2446 64 0 3 chr5 110740013 110740308 -88889842 - AluY SINE Alu -17 294 1 580 256 199 5 chr5 110740653 110740844 -88889306 - MIR SINE MIR -33 229 2 2214 169 7 33 chr5 110741306 110741731 -88888419 + MLT2D LTR ERVL 1 414 0 609 270 87 39 chr5 110741733 110742138 -88888012 + MLT1L LTR MaLR 88 598 -17 329 331 70 37 chr5 110742220 110742462 -88887688 - MER102a DNA MER1_type -10 320 71 2160 123 7 0 chr5 110744203 110744511 -88885639 + AluSx SINE Alu 3 312 0 495 0 0 0 chr5 110745600 110745655 -88884495 + (TA)n Simple_repeat Simple_repeat 1 55 0 2360 83 0 3 chr5 110745655 110745956 -88884194 - AluY SINE Alu -11 300 1 1738 178 20 0 chr5 110745960 110746252 -88883898 - AluJo SINE Alu -4 308 11 318 250 95 54 chr5 110746572 110746699 -88883451 + L2 LINE L2 2158 2295 -1019 1932 169 45 36 chr5 110746699 110747119 -88883031 - MSTB LTR MaLR 0 426 3 318 250 95 54 chr5 110747119 110747159 -88882991 + L2 LINE L2 2295 2332 -982 37 62 0 0 chr5 110747364 110747429 -88882721 + AT_rich Low_complexity Low_complexity 1 65 0 325 357 81 19 chr5 110748183 110748393 -88881757 - MIR SINE MIR -28 234 12 2271 129 0 0 chr5 110749105 110749416 -88880734 - AluSx SINE Alu -1 311 1 2223 117 0 7 chr5 110750711 110751018 -88879132 - AluSx SINE Alu -7 305 1 211 330 33 22 chr5 110751656 110751747 -88878403 - MIR SINE MIR -63 145 66 2503 58 0 0 chr5 110753082 110753393 -88876757 + AluY SINE Alu 1 311 0 231 36 0 0 chr5 110754545 110754573 -88875577 + (TG)n Simple_repeat Simple_repeat 1 28 0 293 253 160 19 chr5 110755333 110755478 -88874672 - MIR SINE MIR -58 204 41 3447 207 46 36 chr5 110755667 110756572 -88873578 + L1MCa LINE L1 20 933 -5493 279 195 133 9 chr5 110756582 110756695 -88873455 - L1MCa LINE L1 -4097 2329 2203 367 202 71 0 chr5 110756747 110756831 -88873319 + L1MCa LINE L1 929 1018 -5408 * 1255 219 22 51 chr5 110756829 110757433 -88872717 + L1MCa LINE L1 2254 2839 -3587 943 223 29 70 chr5 110757537 110757878 -88872272 + L1M4 LINE L1 4313 4639 -1507 438 283 66 18 chr5 110758990 110759156 -88870994 - MIR SINE MIR 0 262 89 1900 194 42 123 chr5 110759208 110759638 -88870512 - MLT1F1 LTR MaLR 0 567 201 1201 209 121 21 chr5 110759638 110759978 -88870172 + MLT1A2 LTR MaLR 1 374 0 1900 194 42 123 chr5 110759978 110760164 -88869986 - MLT1F1 LTR MaLR -366 201 1 2037 100 31 3 chr5 110760452 110760743 -88869407 - AluSc SINE Alu -8 301 3 2419 75 0 0 chr5 110760754 110761062 -88869088 - AluY SINE Alu -3 308 1 703 280 78 5 chr5 110761173 110761391 -88868759 + MIR SINE MIR 26 259 -3 216 0 0 0 chr5 110761440 110761464 -88868686 + (T)n Simple_repeat Simple_repeat 1 24 0 365 386 61 12 chr5 110762431 110762594 -88867556 + MER5B DNA MER1_type 5 175 -3 2350 78 0 19 chr5 110763089 110763397 -88866753 + AluY SINE Alu 1 302 -9 340 164 0 0 chr5 110763519 110763574 -88866576 + L2 LINE L2 3257 3311 -2 300 27 0 0 chr5 110763664 110763701 -88866449 + (TG)n Simple_repeat Simple_repeat 2 38 0 592 302 103 29 chr5 110764275 110764517 -88865633 - MIR SINE MIR 0 262 3 28 86 0 0 chr5 110764670 110764740 -88865410 + AT_rich Low_complexity Low_complexity 1 70 0 2287 77 13 3 chr5 110764926 110765226 -88864924 + AluSc SINE Alu 1 303 -6 2424 76 0 10 chr5 110767622 110767936 -88862214 + AluY SINE Alu 1 311 0 467 198 0 0 chr5 110768009 110768090 -88862060 - L1MA9 LINE L1 -52 6260 6180 2317 148 25 38 chr5 110768092 110768537 -88861613 - L1MA9 LINE L1 -231 6081 5643 260 130 22 0 chr5 110768575 110768621 -88861529 - MLT1I LTR MaLR -358 51 5 750 254 140 12 chr5 110768627 110768962 -88861188 - HAL1 LINE L1 -910 1597 1220 * 1517 251 124 43 chr5 110768943 110769644 -88860506 - HAL1 LINE L1 -1510 997 240 1790 110 3 60 chr5 110769942 110770031 -88860119 + AluSq SINE Alu 30 122 -191 2113 125 6 10 chr5 110770031 110770344 -88859806 - AluSq SINE Alu -1 312 1 1790 110 3 60 chr5 110770344 110770555 -88859595 + AluSq SINE Alu 122 313 0 378 0 0 0 chr5 110771152 110771194 -88858956 + (TG)n Simple_repeat Simple_repeat 1 42 0 209 286 32 0 chr5 110772029 110772092 -88858058 + (ATG)n Simple_repeat Simple_repeat 2 66 0 510 307 69 11 chr5 110772114 110772303 -88857847 - MIR SINE MIR -13 249 50 228 218 0 0 chr5 110773685 110773740 -88856410 + (TGGG)n Simple_repeat Simple_repeat 1 55 0 2028 133 4 0 chr5 110773740 110774019 -88856131 - AluSg SINE Alu -30 280 1 691 293 74 70 chr5 110774948 110775478 -88854672 + MLT1K LTR MaLR 47 578 -10 242 220 0 20 chr5 110776092 110776142 -88854008 + L2 LINE L2 3261 3309 -4 22 0 0 0 chr5 110778198 110778220 -88851930 + AT_rich Low_complexity Low_complexity 1 22 0 1631 150 107 26 chr5 110778486 110778833 -88851317 - THE1C LTR MaLR 0 375 1 9414 105 11 123 chr5 110778833 110780233 -88849917 - THE1C-int LTR MaLR 0 1580 420 2243 121 3 0 chr5 110780233 110780539 -88849611 + AluSx SINE Alu 6 312 0 9414 105 11 123 chr5 110780539 110780917 -88849233 - THE1C-int LTR MaLR -1160 420 1 1912 128 69 28 chr5 110780917 110781277 -88848873 - THE1C LTR MaLR 0 375 1 29 60 0 0 chr5 110781792 110781842 -88848308 + AT_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr5 110782925 110782954 -88847196 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr5 110783339 110783369 -88846781 + AT_rich Low_complexity Low_complexity 1 30 0 2478 70 0 3 chr5 110783468 110783780 -88846370 - AluY SINE Alu 0 311 1 300 364 16 0 chr5 110784520 110784641 -88845509 + L3 LINE CR1 1448 1570 -7 2901 0 0 0 chr5 110784958 110785268 -88844882 + AluYa5 SINE Alu 1 310 -1 222 37 0 0 chr5 110785268 110785295 -88844855 + (TG)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr5 110786103 110786123 -88844027 + (TG)n Simple_repeat Simple_repeat 1 20 0 2443 70 0 0 chr5 110786251 110786552 -88843598 + AluSg1 SINE Alu 1 301 -8 27 73 0 0 chr5 110787983 110788038 -88842112 + AT_rich Low_complexity Low_complexity 1 55 0 253 237 26 0 chr5 110788098 110788174 -88841976 - HAL1 LINE L1 -109 2398 2321 276 268 5 107 chr5 110788270 110788494 -88841656 - HAL1 LINE L1 -420 2087 1887 2358 273 148 50 chr5 110788621 110790350 -88839800 - HAL1 LINE L1 -608 1899 2 22 0 0 0 chr5 110790922 110790944 -88839206 + AT_rich Low_complexity Low_complexity 1 22 0 982 322 48 6 chr5 110790944 110791301 -88838849 + L2 LINE L2 2397 2768 -546 2379 88 0 10 chr5 110791643 110791948 -88838202 - AluY SINE Alu -9 302 1 259 326 134 41 chr5 110791960 110792294 -88837856 + L2 LINE L2 2782 3142 -171 1237 192 21 0 chr5 110792295 110792529 -88837621 - MLT1A1 LTR MaLR 0 365 127 2352 102 0 0 chr5 110792530 110792833 -88837317 + AluSc SINE Alu 1 303 -6 323 328 33 57 chr5 110792850 110792972 -88837178 + L2 LINE L2 3138 3256 -16 327 288 34 25 chr5 110793355 110793473 -88836677 - MIR SINE MIR -56 206 88 1674 204 70 62 chr5 110794273 110794774 -88835376 - MLT1D LTR MaLR 0 505 1 2262 78 3 3 chr5 110794914 110795208 -88834942 + AluY SINE Alu 1 294 -17 2451 52 0 32 chr5 110795453 110795762 -88834388 + AluY SINE Alu 1 299 -12 2365 60 33 0 chr5 110796614 110796915 -88833235 + AluY SINE Alu 1 311 0 460 142 97 58 chr5 110797028 110797183 -88832967 + MER53 DNA DNA 1 161 -28 778 164 58 8 chr5 110797804 110797974 -88832176 + LTR47A LTR ERVL 261 452 0 21 36 0 0 chr5 110798327 110798355 -88831795 + AT_rich Low_complexity Low_complexity 1 28 0 323 235 12 59 chr5 110798496 110798581 -88831569 + MLT1D LTR MaLR 1 81 -424 1051 211 83 35 chr5 110798717 110799099 -88831051 + MLT1D LTR MaLR 114 490 -15 455 294 44 6 chr5 110799196 110799356 -88830794 - MIR SINE MIR -5 257 92 24 0 0 0 chr5 110800009 110800033 -88830117 + AT_rich Low_complexity Low_complexity 1 24 0 250 344 69 15 chr5 110800064 110800195 -88829955 + L2 LINE L2 3163 3300 -13 359 222 143 16 chr5 110800500 110800626 -88829524 - MLT1K LTR MaLR -76 512 371 289 346 19 10 chr5 110800706 110800810 -88829340 - MLT1K LTR MaLR -346 242 138 1309 182 29 12 chr5 110803142 110803384 -88826766 + AluJo SINE Alu 47 292 -20 597 284 84 40 chr5 110804429 110804679 -88825471 + L2 LINE L2 3051 3311 -2 256 297 0 0 chr5 110805864 110805928 -88824222 + CT-rich Low_complexity Low_complexity 4 67 0 237 305 136 7 chr5 110806028 110806182 -88823968 + MIR SINE MIR 32 205 -57 1876 88 20 0 chr5 110806449 110806699 -88823451 + AluY SINE Alu 45 299 -12 360 0 0 0 chr5 110807351 110807391 -88822759 + (TTA)n Simple_repeat Simple_repeat 2 41 0 2156 113 3 0 chr5 110807460 110807751 -88822399 - AluY SINE Alu -19 292 1 428 111 0 0 chr5 110808968 110809040 -88821110 - AluY SINE Alu 0 312 241 1012 76 15 0 chr5 110809040 110809172 -88820978 - AluY SINE Alu -104 207 74 667 313 78 41 chr5 110809334 110809962 -88820188 - L2 LINE L2 0 3313 2667 2440 80 0 0 chr5 110809976 110810275 -88819875 + AluY SINE Alu 3 301 -10 2288 89 0 32 chr5 110810349 110810665 -88819485 + AluSg1 SINE Alu 1 306 -3 24 53 0 0 chr5 110810691 110810729 -88819421 + AT_rich Low_complexity Low_complexity 1 38 0 1721 189 42 127 chr5 110810959 110811462 -88818688 - MLT2D LTR ERVL 0 464 5 565 303 35 15 chr5 110812068 110812266 -88817884 + MIR SINE MIR 2 203 -59 207 0 0 0 chr5 110812773 110812796 -88817354 + (T)n Simple_repeat Simple_repeat 1 23 0 2312 105 0 3 chr5 110813192 110813506 -88816644 + AluSq SINE Alu 1 313 0 346 65 32 32 chr5 110813506 110813568 -88816582 + (GGAA)n Simple_repeat Simple_repeat 4 65 0 213 313 100 0 chr5 110813887 110813967 -88816183 - MIR3 SINE MIR -8 200 113 194 119 48 0 chr5 110814118 110814160 -88815990 + GA-rich Low_complexity Low_complexity 5 48 0 960 212 122 4 chr5 110814294 110814549 -88815601 - MER67D LTR ERV1 -6 508 224 559 200 67 0 chr5 110814573 110814678 -88815472 - FLAM_A SINE Alu -30 112 1 825 167 105 0 chr5 110814680 110814902 -88815248 - MER67D LTR ERV1 -359 155 4 195 297 198 9 chr5 110814999 110815110 -88815040 - MIR SINE MIR -61 147 16 338 331 132 19 chr5 110815327 110815593 -88814557 - L2 LINE L2 -8 3305 3010 747 263 31 57 chr5 110815648 110815876 -88814274 - MIR SINE MIR 0 262 41 356 341 28 22 chr5 110815909 110816091 -88814059 - L2 LINE L2 -410 2904 2722 21 71 0 0 chr5 110818344 110818386 -88811764 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 110819162 110819183 -88810967 + AT_rich Low_complexity Low_complexity 1 21 0 258 246 29 14 chr5 110819494 110819563 -88810587 + L2 LINE L2 3240 3309 -4 351 0 0 0 chr5 110819963 110820002 -88810148 + (TG)n Simple_repeat Simple_repeat 2 40 0 727 264 194 63 chr5 110820263 110820804 -88809346 - MLT1G LTR MaLR 0 590 8 7835 179 62 22 chr5 110821702 110823297 -88806853 - MER52A LTR ERV1 0 1755 1 226 206 29 0 chr5 110824497 110824565 -88805585 + (TA)n Simple_repeat Simple_repeat 1 70 0 2388 70 0 7 chr5 110824931 110825231 -88804919 + AluY SINE Alu 1 298 -13 891 84 34 0 chr5 110825431 110825598 -88804552 - AluSg/x SINE Alu 0 330 160 1159 97 0 0 chr5 110825869 110826014 -88804136 - AluSq/x SINE Alu -167 145 1 25 0 0 0 chr5 110829524 110829549 -88800601 + AT_rich Low_complexity Low_complexity 1 25 0 1775 140 8 0 chr5 110829550 110829807 -88800343 - AluSx SINE Alu -21 291 33 1015 179 88 124 chr5 110829933 110830375 -88799775 - LTR23 LTR ERV1 0 437 12 1977 194 3 21 chr5 110830680 110831067 -88799083 - LOR1b LTR ERV1 0 461 82 1427 130 14 5 chr5 110831035 110831258 -88798892 + MER50 LTR ERV1 487 711 -23 * 2112 126 13 7 chr5 110831696 110832006 -88798144 + AluSx SINE Alu 1 312 0 300 274 200 0 chr5 110833960 110834095 -88796055 + L2 LINE L2 3142 3303 -10 462 288 9 7 chr5 110834401 110834541 -88795609 + L1MC/D LINE L1 5490 5627 -722 2462 71 0 0 chr5 110834666 110834963 -88795187 + AluY SINE Alu 1 297 -14 2105 114 0 0 chr5 110835148 110835452 -88794698 + AluSc SINE Alu 1 304 0 27 0 0 0 chr5 110835477 110835504 -88794646 + AT_rich Low_complexity Low_complexity 1 27 0 228 293 66 9 chr5 110835663 110835769 -88794381 + MIR SINE MIR 50 161 -101 427 322 19 29 chr5 110835795 110836000 -88794150 - MIR SINE MIR -57 205 3 1476 139 117 22 chr5 110836011 110836307 -88793843 - MSTA LTR MaLR 0 428 86 3706 91 234 42 chr5 110836308 110836404 -88793746 - LTR12 LTR ERV1 -2 824 748 2250 109 0 3 chr5 110836404 110836708 -88793442 + AluY SINE Alu 1 303 -8 3706 91 234 42 chr5 110836708 110837302 -88792848 - LTR12 LTR ERV1 -78 748 1 856 221 38 52 chr5 110837382 110837672 -88792478 - pTR5 LTR ERV1 -1410 1028 743 568 157 0 0 chr5 110837672 110837761 -88792389 - MSTA LTR MaLR -339 89 1 2162 127 0 0 chr5 110837881 110838172 -88791978 - AluSc SINE Alu -16 293 3 1295 114 0 11 chr5 110838258 110838442 -88791708 + AluSg/x SINE Alu 103 284 -26 21 0 0 0 chr5 110838528 110838549 -88791601 + AT_rich Low_complexity Low_complexity 1 21 0 350 318 8 16 chr5 110838611 110838740 -88791410 + CT-rich Low_complexity Low_complexity 1 128 0 1975 113 67 0 chr5 110844525 110844809 -88785341 + AluSx SINE Alu 1 303 -9 2004 249 102 36 chr5 110844910 110845626 -88784524 - LTR41 LTR ERVL -10 763 1 2907 178 72 50 chr5 110845718 110846382 -88783768 + MER39 LTR ERV1 29 707 0 737 234 73 44 chr5 110846907 110847155 -88782995 + MER39-int LTR ERV1 1377 1631 -4700 1976 181 19 60 chr5 110847157 110847205 -88782945 - MSTB1 LTR MaLR -2 430 382 2091 132 0 3 chr5 110847205 110847501 -88782649 - AluSq SINE Alu -18 295 1 1976 181 19 60 chr5 110847501 110847729 -88782421 - MSTB1 LTR MaLR -50 382 146 1865 163 47 41 chr5 110847729 110848091 -88782059 - THE1B LTR MaLR 0 364 1 11643 99 7 0 chr5 110848091 110849660 -88780490 - THE1B-int LTR MaLR 0 1580 1 2175 117 50 39 chr5 110849660 110850020 -88780130 - THE1B LTR MaLR 0 364 1 1976 181 19 60 chr5 110850020 110850172 -88779978 - MSTB1 LTR MaLR -283 149 17 2099 109 17 0 chr5 110850178 110850472 -88779678 - AluSp SINE Alu -14 299 1 257 159 127 0 chr5 110850503 110850566 -88779584 + MER39-int LTR ERV1 1988 2058 -3888 1448 249 13 42 chr5 110850587 110850965 -88779185 + MER39-int LTR ERV1 1908 2274 -4057 262 213 0 0 chr5 110850963 110851010 -88779140 + MER39-int LTR ERV1 295 341 -7196 * 748 252 26 19 chr5 110851290 110851636 -88778514 + MER39-int LTR ERV1 753 2714 -3617 520 173 19 160 chr5 110851639 110851801 -88778349 - MER54A LTR ERVL -489 340 1 713 266 9 9 chr5 110851945 110852159 -88777991 + MER39-int LTR ERV1 1908 2121 -2750 393 309 8 24 chr5 110852318 110852444 -88777706 + MER39-int LTR ERV1 3264 3387 -2944 431 173 61 103 chr5 110852534 110852645 -88777505 + MER39-int LTR ERV1 1725 1824 -3299 2113 128 0 0 chr5 110852645 110852935 -88777215 - AluY SINE Alu -21 290 1 431 173 61 103 chr5 110852935 110853037 -88777113 + MER39-int LTR ERV1 1824 1929 -3194 24 77 0 0 chr5 110853043 110853095 -88777055 + AT_rich Low_complexity Low_complexity 1 52 0 4962 177 77 70 chr5 110853220 110854047 -88776103 + MER39-int LTR ERV1 3508 4328 -2003 2234 109 0 6 chr5 110854047 110854358 -88775792 + AluY SINE Alu 1 309 -2 4962 177 77 70 chr5 110854358 110855032 -88775118 + MER39-int LTR ERV1 4328 5023 -1308 1974 154 7 0 chr5 110855032 110855330 -88774820 + AluSx SINE Alu 2 301 -11 4962 177 77 70 chr5 110855330 110855396 -88774754 + MER39-int LTR ERV1 5023 5087 -1244 1189 129 39 142 chr5 110855376 110855713 -88774437 - LTR12 LTR ERV1 -388 1798 55 * 264 231 0 0 chr5 110855725 110855777 -88774373 - LTR30 LTR ERV1 -670 52 1 2627 142 16 56 chr5 110855777 110855947 -88774203 + MER39-int LTR ERV1 5061 5236 -1095 2093 142 3 0 chr5 110855947 110856256 -88773894 + AluY SINE Alu 1 310 -1 2627 142 16 56 chr5 110856256 110856640 -88773510 + MER39-int LTR ERV1 5236 5593 -738 608 192 34 132 chr5 110856639 110856980 -88773170 + MER39-int LTR ERV1 4594 6181 -150 * 2930 188 75 20 chr5 110857038 110857665 -88772485 + MER39 LTR ERV1 1 702 -5 2014 119 0 0 chr5 110857822 110858099 -88772051 - AluSq SINE Alu -16 297 21 2361 84 0 3 chr5 110858173 110858471 -88771679 - AluY SINE Alu -14 297 1 182 188 0 0 chr5 110860053 110860085 -88770065 - MIR SINE MIR -120 142 111 218 184 0 0 chr5 110860383 110860421 -88769729 + (TAG)n Simple_repeat Simple_repeat 3 40 0 286 317 42 33 chr5 110860594 110860714 -88769436 - MIR3 SINE MIR -21 187 67 617 322 101 29 chr5 110861081 110861424 -88768726 + MLT1J2 LTR MaLR 64 411 -39 28 61 0 0 chr5 110862626 110862675 -88767475 + AT_rich Low_complexity Low_complexity 1 49 0 2023 128 0 38 chr5 110862811 110863130 -88767020 + AluSq SINE Alu 1 307 -6 184 106 0 64 chr5 110863788 110863835 -88766315 + (TTTC)n Simple_repeat Simple_repeat 2 45 0 219 36 0 0 chr5 110863918 110863946 -88766204 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 180 0 0 0 chr5 110864620 110864640 -88765510 + (TTG)n Simple_repeat Simple_repeat 2 21 0 22 56 0 0 chr5 110864993 110865029 -88765121 + AT_rich Low_complexity Low_complexity 1 36 0 2341 82 0 7 chr5 110867893 110868198 -88761952 + AluY SINE Alu 1 303 -8 21 0 0 0 chr5 110868441 110868462 -88761688 + AT_rich Low_complexity Low_complexity 1 21 0 2014 92 26 7 chr5 110868923 110869195 -88760955 - AluSc SINE Alu -32 277 1 26 0 0 0 chr5 110869454 110869480 -88760670 + AT_rich Low_complexity Low_complexity 1 26 0 624 269 76 34 chr5 110869554 110869792 -88760358 - MIR SINE MIR 0 262 15 1052 134 12 12 chr5 110869913 110870111 -88760039 + AluJo SINE Alu 121 318 0 2319 88 10 0 chr5 110870899 110871194 -88758956 - AluSx SINE Alu -12 300 3 210 156 0 0 chr5 110871258 110871303 -88758847 + CT-rich Low_complexity Low_complexity 2 46 0 564 114 0 0 chr5 110871404 110871483 -88758667 + AluSg/x SINE Alu 216 294 -18 23 0 0 0 chr5 110872154 110872177 -88757973 + AT_rich Low_complexity Low_complexity 1 23 0 258 259 0 0 chr5 110873591 110873645 -88756505 + CT-rich Low_complexity Low_complexity 4 57 0 567 338 36 26 chr5 110874061 110874369 -88755781 + L2 LINE L2 2165 2475 -839 2270 64 7 3 chr5 110874370 110874681 -88755469 - AluY SINE Alu 0 312 1 24 53 0 0 chr5 110874732 110874770 -88755380 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 110875151 110875173 -88754977 + AT_rich Low_complexity Low_complexity 1 22 0 2237 117 3 0 chr5 110875234 110875542 -88754608 - AluYa5 SINE Alu -2 309 1 237 182 0 0 chr5 110875673 110875717 -88754433 + L2 LINE L2 3269 3312 -1 2182 128 0 0 chr5 110875901 110876206 -88753944 + AluSg SINE Alu 1 305 -5 1831 170 3 3 chr5 110876234 110876528 -88753622 + AluSx SINE Alu 1 294 -18 2066 122 0 26 chr5 110876530 110876842 -88753308 + AluSg SINE Alu 1 304 -6 901 223 59 44 chr5 110876843 110876992 -88753158 - L1ME3 LINE L1 -58 6104 5948 1649 190 64 21 chr5 110876992 110877366 -88752784 + MLT1B LTR MaLR 1 390 0 901 223 59 44 chr5 110877366 110877489 -88752661 - L1ME3 LINE L1 -214 5948 5828 1109 221 33 121 chr5 110877843 110877987 -88752163 - L1ME3 LINE L1 -346 5818 5663 2462 84 0 0 chr5 110877987 110878296 -88751854 - AluSc SINE Alu 0 309 1 1109 221 33 121 chr5 110878296 110878668 -88751482 - L1ME3 LINE L1 -501 5663 5366 2111 128 3 0 chr5 110878668 110878964 -88751186 + AluSg1 SINE Alu 2 298 -11 1109 221 33 121 chr5 110878964 110879109 -88751041 - L1ME3 LINE L1 -798 5366 5210 1144 307 23 8 chr5 110879182 110879658 -88750492 + L1ME3A LINE L1 5505 5987 -183 2431 229 22 11 chr5 110879658 110880212 -88749938 - MLT1F1 LTR MaLR 0 567 8 411 206 7 99 chr5 110882549 110882690 -88747460 + MIR SINE MIR 122 249 -13 201 239 45 45 chr5 110883142 110883209 -88746941 - L2 LINE L2 -6 3266 3200 324 341 22 0 chr5 110884036 110884127 -88746023 - MER5A DNA MER1_type -88 101 9 1101 93 0 7 chr5 110885688 110885862 -88744288 - AluSc SINE Alu 0 304 132 2409 73 0 3 chr5 110885862 110886162 -88743988 - AluY SINE Alu -12 299 1 416 331 94 49 chr5 110886316 110886769 -88743381 + L2 LINE L2 2717 3273 -40 5115 81 0 4 chr5 110887077 110887768 -88742382 + L1PA8A LINE L1 5444 6131 0 182 390 21 11 chr5 110888400 110888495 -88741655 - L3 LINE CR1 -1423 154 59 2406 77 0 6 chr5 110889110 110889421 -88740729 + AluY SINE Alu 1 309 -2 32 0 0 0 chr5 110890064 110890096 -88740054 + AT_rich Low_complexity Low_complexity 1 32 0 301 355 33 8 chr5 110890537 110890658 -88739492 - MIR SINE MIR -117 145 22 1927 193 148 21 chr5 110890748 110891083 -88739067 - MER70A LTR ERVL 0 472 72 2177 120 0 0 chr5 110891083 110891383 -88738767 - AluSc SINE Alu -9 300 1 1927 193 148 21 chr5 110891383 110891466 -88738684 - MER70A LTR ERVL -400 72 1 1648 74 0 0 chr5 110891597 110891800 -88738350 - AluY SINE Alu -10 301 99 29 28 0 0 chr5 110891987 110892023 -88738127 + AT_rich Low_complexity Low_complexity 1 36 0 258 301 36 0 chr5 110892945 110893028 -88737122 - MIR SINE MIR -76 132 47 440 198 113 0 chr5 110893033 110893139 -88737011 - MIR SINE MIR -72 190 73 291 267 160 8 chr5 110893316 110893447 -88736703 - MIR SINE MIR -6 256 106 1322 198 28 82 chr5 110893477 110893638 -88736512 + MLT1A2 LTR MaLR 3 171 -203 2294 115 0 0 chr5 110893638 110893951 -88736199 + AluSq SINE Alu 1 313 0 1322 198 28 82 chr5 110893951 110893967 -88736183 + MLT1A2 LTR MaLR 171 186 -188 1632 177 20 90 chr5 110893967 110894357 -88735793 + MLT1A1 LTR MaLR 1 363 -2 1322 198 28 82 chr5 110894357 110894567 -88735583 + MLT1A2 LTR MaLR 186 370 -4 266 253 27 0 chr5 110894704 110894779 -88735371 - MIR SINE MIR -92 116 40 1193 137 112 154 chr5 110895741 110896188 -88733962 - THE1C LTR MaLR 0 428 1 292 295 155 16 chr5 110896249 110896378 -88733772 + MIR SINE MIR 107 253 -9 1711 213 39 41 chr5 110897599 110898112 -88732038 + Charlie1b DNA MER1_type 8 519 -4 254 305 114 0 chr5 110898163 110898294 -88731856 + MLT1J1 LTR MaLR 9 154 -292 237 310 0 40 chr5 110898498 110898598 -88731552 + MLT1I LTR MaLR 314 409 0 184 326 81 58 chr5 110899928 110900014 -88730136 - L2 LINE L2 -219 3053 2966 395 355 21 5 chr5 110900238 110900427 -88729723 - L2 LINE L2 -604 2710 2519 202 28 28 28 chr5 110900497 110900533 -88729617 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 1839 196 0 0 chr5 110900639 110900951 -88729199 - AluJb SINE Alu 0 312 1 476 266 19 19 chr5 110900969 110901127 -88729023 + L2 LINE L2 3150 3307 -6 402 333 11 23 chr5 110901184 110901361 -88728789 - L2 LINE L2 -955 2359 2185 2259 148 3 24 chr5 110902391 110902763 -88727387 - THE1B LTR MaLR 0 364 1 21 107 0 0 chr5 110903042 110903126 -88727024 + AT_rich Low_complexity Low_complexity 1 84 0 206 333 0 0 chr5 110903223 110903286 -88726864 - MIR SINE MIR -119 89 27 321 330 40 0 chr5 110905250 110905350 -88724800 - L2 LINE L2 -9 3304 3201 183 195 91 65 chr5 110905509 110905586 -88724564 - L2 LINE L2 -2797 517 439 220 265 84 12 chr5 110906342 110906425 -88723725 - MER5B DNA MER1_type 0 178 90 193 297 81 14 chr5 110906364 110906438 -88723712 + MER5A DNA MER1_type 34 112 -77 * 2408 71 0 3 chr5 110907232 110907526 -88722624 - AluY SINE Alu -18 293 1 31 58 0 0 chr5 110908128 110908180 -88721970 + AT_rich Low_complexity Low_complexity 1 52 0 207 0 0 0 chr5 110909903 110909926 -88720224 + (TC)n Simple_repeat Simple_repeat 2 24 0 13403 152 34 7 chr5 110910124 110912416 -88717734 - Tigger1 DNA MER2_type 0 2418 59 180 0 0 0 chr5 110912416 110912436 -88717714 + (CAA)n Simple_repeat Simple_repeat 2 21 0 13403 152 34 7 chr5 110912436 110912497 -88717653 - Tigger1 DNA MER2_type -2359 59 1 4773 214 49 24 chr5 111012543 111013635 -88616515 - L1PBb LINE L1 -3793 2410 1346 2506 61 0 10 chr5 111013635 111013948 -88616202 - AluY SINE Alu -1 310 1 2411 75 0 10 chr5 111013953 111014260 -88615890 - AluY SINE Alu -7 304 1 4773 214 49 24 chr5 111014260 111014737 -88615413 - L1PBb LINE L1 -4860 1343 709 242 87 65 0 chr5 111016101 111016147 -88614003 - L1 LINE L1 -1629 4517 4469 24 32 0 0 chr5 111016513 111016544 -88613606 + AT_rich Low_complexity Low_complexity 1 31 0 1589 185 80 51 chr5 111016983 111017271 -88612879 + MER65C LTR ERV1 1 279 -182 1514 183 66 17 chr5 111017271 111017560 -88612590 - AluJb SINE Alu -9 303 1 1589 185 80 51 chr5 111017560 111017673 -88612477 + MER65C LTR ERV1 279 419 -42 1901 174 3 0 chr5 111017673 111017978 -88612172 + AluJo SINE Alu 6 311 -1 1589 185 80 51 chr5 111017978 111018023 -88612127 + MER65C LTR ERV1 419 461 0 1621 113 0 0 chr5 111019494 111019707 -88610443 + AluSg/x SINE Alu 70 282 -30 1999 136 0 4 chr5 111019734 111020014 -88610136 + AluSx SINE Alu 3 281 -31 2567 86 12 9 chr5 111020156 111022417 -88607733 - L1P3 LINE L1 -422 5732 3386 2323 85 0 25 chr5 111022417 111022736 -88607414 - AluY SINE Alu 0 311 1 2567 86 12 9 chr5 111022736 111023203 -88606947 - L1P3 LINE L1 -2768 3386 2922 * 11302 105 8 9 chr5 111023195 111024988 -88605162 + L1P LINE L1 1323 3114 -3032 1933 135 21 0 chr5 111025229 111025510 -88604640 + AluSp SINE Alu 1 287 -26 426 328 30 25 chr5 111025886 111026084 -88604066 - MIR SINE MIR -44 218 20 212 161 16 0 chr5 111027976 111028038 -88602112 + (TA)n Simple_repeat Simple_repeat 1 63 0 50 59 0 0 chr5 111028426 111028511 -88601639 + AT_rich Low_complexity Low_complexity 1 85 0 338 61 20 0 chr5 111029183 111029232 -88600918 + (TG)n Simple_repeat Simple_repeat 2 51 0 24 67 0 0 chr5 111029382 111029427 -88600723 + AT_rich Low_complexity Low_complexity 1 45 0 1636 204 4 4 chr5 111031504 111031779 -88598371 + AluJb SINE Alu 1 275 -37 503 323 85 12 chr5 111031795 111032114 -88598036 + L1ME3A LINE L1 2211 2552 -3594 23 0 0 0 chr5 111032199 111032222 -88597928 + AT_rich Low_complexity Low_complexity 1 23 0 1436 245 49 38 chr5 111032274 111032780 -88597370 - L1ME1 LINE L1 -222 6338 5830 970 229 92 38 chr5 111032802 111033304 -88596846 - L1ME1 LINE L1 -2358 4182 3654 939 222 111 14 chr5 111033284 111033635 -88596515 - L1ME1 LINE L1 -3194 3346 2962 * 376 304 54 16 chr5 111033640 111033824 -88596326 - L1ME1 LINE L1 -4333 2207 2017 995 256 56 67 chr5 111033829 111034596 -88595554 - L1ME1 LINE L1 -4870 1670 929 187 53 26 26 chr5 111034754 111034792 -88595358 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 200 297 0 0 chr5 111037128 111037192 -88592958 + CT-rich Low_complexity Low_complexity 1 64 0 516 329 39 53 chr5 111037510 111037847 -88592303 - L1ME1 LINE L1 -6191 349 18 * 638 316 142 24 chr5 111037842 111038349 -88591801 + L1ME3A LINE L1 2694 3260 -2886 32 57 0 0 chr5 111038370 111038423 -88591727 + AT_rich Low_complexity Low_complexity 1 53 0 358 229 163 54 chr5 111038556 111038722 -88591428 + MIR SINE MIR 79 262 0 1039 311 86 13 chr5 111038729 111039472 -88590678 + L1ME3A LINE L1 3648 4445 -1701 619 296 169 27 chr5 111039487 111040116 -88590034 + L1ME3A LINE L1 4518 5245 -901 593 322 51 23 chr5 111040178 111040747 -88589403 + L1ME3A LINE L1 5299 5883 -287 1575 187 33 0 chr5 111040753 111041054 -88589096 + AluJb SINE Alu 2 311 0 2085 99 0 7 chr5 111041057 111041378 -88588772 + AluSg SINE Alu 1 319 0 21 0 0 0 chr5 111041934 111041955 -88588195 + AT_rich Low_complexity Low_complexity 1 21 0 1775 198 51 5 chr5 111042608 111043003 -88587147 + MLT2C2 LTR ERVL 6 418 -46 474 59 12 24 chr5 111043076 111043161 -88586989 + (TCTA)n Simple_repeat Simple_repeat 4 87 0 431 181 52 9 chr5 111043622 111043738 -88586412 - MER65B LTR ERV1 -410 121 1 1262 132 154 43 chr5 111043738 111044063 -88586087 - MER31B LTR ERV1 -105 361 1 812 165 0 0 chr5 111044288 111044415 -88585735 + FRAM SINE Alu 31 157 -19 366 188 0 94 chr5 111045408 111045493 -88584657 + MIR3 SINE MIR 121 197 -11 234 320 96 0 chr5 111045816 111045941 -88584209 + MIR SINE MIR 72 208 -54 795 205 125 50 chr5 111046288 111046591 -88583559 + MLT1A1 LTR MaLR 33 358 -7 2086 223 30 4 chr5 111046677 111047149 -88583001 - LTR42 LTR ERVL -11 484 1 1125 95 7 0 chr5 111047410 111047558 -88582592 - AluSp SINE Alu -164 149 1 267 244 12 12 chr5 111047601 111047683 -88582467 - L1ME3 LINE L1 -22 6140 6059 248 279 43 25 chr5 111047821 111047982 -88582168 - L1ME3 LINE L1 -391 5771 5608 367 282 30 5 chr5 111048048 111048261 -88581889 - L1ME3 LINE L1 -689 5473 5304 688 167 0 9 chr5 111048261 111048375 -88581775 + FLAM_C SINE Alu 1 113 -30 266 241 26 0 chr5 111048421 111048537 -88581613 - L1ME3 LINE L1 -834 5312 5194 2197 89 3 24 chr5 111048541 111048834 -88581316 - AluSc SINE Alu -22 287 1 2375 93 3 3 chr5 111048996 111049308 -88580842 - AluSx SINE Alu 0 312 1 265 226 0 0 chr5 111049318 111049371 -88580779 - FLAM SINE Alu -9 124 72 2094 154 0 0 chr5 111049987 111050298 -88579852 - AluSx SINE Alu -1 311 1 189 0 0 0 chr5 111051167 111051188 -88578962 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1962 93 0 4 chr5 111051239 111051496 -88578654 - AluY SINE Alu -55 256 1 479 273 26 0 chr5 111051525 111051679 -88578471 + MER58B DNA MER1_type 181 338 -3 205 264 155 23 chr5 111051758 111051887 -88578263 - L2 LINE L2 -87 3226 3081 2263 100 17 3 chr5 111052413 111052712 -88577438 + AluSq SINE Alu 2 304 -9 2159 113 3 0 chr5 111057992 111058292 -88571858 - AluSx SINE Alu -11 301 1 1437 89 0 0 chr5 111060217 111060407 -88569743 - L1PA7 LINE L1 -8 6146 5957 414 266 30 40 chr5 111061202 111061401 -88568749 + L2 LINE L2 2680 2876 -438 1395 207 24 58 chr5 111061931 111062307 -88567843 + MLT1A1 LTR MaLR 3 365 0 2021 137 7 0 chr5 111062402 111062695 -88567455 - AluSc SINE Alu -14 295 1 2326 200 13 11 chr5 111062947 111063413 -88566737 - MLT1C LTR MaLR 0 467 1 22 56 0 0 chr5 111063539 111063575 -88566575 + AT_rich Low_complexity Low_complexity 1 36 0 754 285 85 26 chr5 111063666 111063936 -88566214 + MLT1K LTR MaLR 139 424 -164 2002 116 84 32 chr5 111064662 111065006 -88565144 + THE1B LTR MaLR 3 364 0 24 0 0 0 chr5 111065184 111065208 -88564942 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr5 111065418 111065444 -88564706 + AT_rich Low_complexity Low_complexity 1 26 0 24 53 0 0 chr5 111066327 111066365 -88563785 + AT_rich Low_complexity Low_complexity 1 38 0 213 39 0 0 chr5 111066963 111066989 -88563161 + (CAAAC)n Simple_repeat Simple_repeat 2 27 0 24 53 0 0 chr5 111067231 111067269 -88562881 + AT_rich Low_complexity Low_complexity 1 38 0 2553 222 48 56 chr5 111068404 111069074 -88561076 - L1ME2 LINE L1 -9 6155 5488 1582 202 31 0 chr5 111069074 111069366 -88560784 + AluJo SINE Alu 1 301 -11 2553 222 48 56 chr5 111069366 111069897 -88560253 - L1ME2 LINE L1 -676 5488 4954 7995 243 79 24 chr5 111070202 111070364 -88559786 + L1M4c LINE L1 40 192 -6657 1509 169 103 26 chr5 111070364 111070712 -88559438 - THE1C LTR MaLR 0 375 1 7995 243 79 24 chr5 111070712 111072151 -88557999 + L1M4c LINE L1 192 1550 -5299 2213 133 0 3 chr5 111072151 111072459 -88557691 + AluSg SINE Alu 1 307 -3 7995 243 79 24 chr5 111072459 111072595 -88557555 + L1M4c LINE L1 1550 1677 -5172 1936 121 0 4 chr5 111072595 111072860 -88557290 + AluSc SINE Alu 39 302 -7 7995 243 79 24 chr5 111072860 111073670 -88556480 + L1M4c LINE L1 1677 2730 -4119 404 299 18 12 chr5 111073782 111073949 -88556201 + AluSq SINE Alu 146 313 0 223 188 16 31 chr5 111074549 111074613 -88555537 + A-rich Low_complexity Low_complexity 4 66 0 305 272 78 36 chr5 111075429 111075601 -88554549 + L1M4c LINE L1 2726 2898 -3952 336 102 0 0 chr5 111075973 111076022 -88554128 + (CA)n Simple_repeat Simple_repeat 2 50 0 257 254 90 8 chr5 111076067 111076201 -88553949 + L1M4c LINE L1 3831 3975 -2873 360 322 70 43 chr5 111076241 111076542 -88553608 + L1M4c LINE L1 4038 4346 -2502 1085 197 103 30 chr5 111076592 111076892 -88553258 + MER2 DNA MER2_type 24 345 0 477 359 50 29 chr5 111076899 111077275 -88552875 + L1M4c LINE L1 4381 4764 -2084 1992 202 37 102 chr5 111077448 111078309 -88551841 + L1MA4A LINE L1 2338 3072 -3776 294 29 0 0 chr5 111078309 111078344 -88551806 + (TG)n Simple_repeat Simple_repeat 2 36 0 1992 202 37 102 chr5 111078344 111078894 -88551256 + L1MA4A LINE L1 3072 3656 -3192 1520 177 54 46 chr5 111078896 111079268 -88550882 + THE1C LTR MaLR 1 375 0 7511 101 23 192 chr5 111079271 111081163 -88548987 + THE1C-int LTR MaLR 4 1574 -6 2194 126 47 16 chr5 111081164 111081528 -88548622 + THE1C LTR MaLR 1 375 0 4930 174 15 27 chr5 111081530 111081908 -88548242 + L1MA4A LINE L1 4650 5031 -1974 2150 124 0 0 chr5 111081908 111082213 -88547937 - AluSx SINE Alu 0 305 1 4930 174 15 27 chr5 111082213 111084118 -88546032 + L1MA4A LINE L1 5031 7002 -3 1307 207 4 0 chr5 111084122 111084354 -88545796 + AluJb SINE Alu 1 233 -79 2097 64 23 0 chr5 111084454 111084720 -88545430 - AluY SINE Alu -39 272 1 297 260 125 24 chr5 111085000 111085208 -88544942 + L1MC5 LINE L1 7452 7680 -281 23 0 0 0 chr5 111085438 111085461 -88544689 + AT_rich Low_complexity Low_complexity 1 23 0 257 255 82 31 chr5 111086024 111086122 -88544028 - MIR SINE MIR -68 194 92 23 92 0 0 chr5 111087027 111087092 -88543058 + AT_rich Low_complexity Low_complexity 1 65 0 921 164 0 0 chr5 111087107 111087259 -88542891 - MER57A LTR ERV1 -251 152 1 1135 181 9 9 chr5 111087262 111087488 -88542662 - MER57A-int LTR ERV1 -5 7532 7307 736 131 59 26 chr5 111087488 111087641 -88542509 - LTR54B LTR ERV1 -338 160 3 6815 191 21 12 chr5 111087641 111089119 -88541031 - MER57A-int LTR ERV1 -390 7147 2453 7765 159 17 40 chr5 111089281 111090861 -88539289 - MER57A-int LTR ERV1 -1716 5821 4278 854 205 54 46 chr5 111090898 111091418 -88538732 - MER57A-int LTR ERV1 -2673 3590 1698 475 230 0 0 chr5 111091530 111091630 -88538520 - MER57A-int LTR ERV1 -2878 3453 3354 378 258 0 0 chr5 111091689 111091782 -88538368 - MER57A-int LTR ERV1 -2993 3338 3246 269 216 27 0 chr5 111091801 111091875 -88538275 - MER57A-int LTR ERV1 -2966 2980 2905 423 238 11 162 chr5 111091889 111092154 -88537996 - MER57A-int LTR ERV1 -3732 1391 1167 374 131 16 0 chr5 111092262 111092323 -88537827 - MER34C LTR ERV1 -369 216 155 415 250 62 35 chr5 111092323 111092374 -88537776 - MER57A-int LTR ERV1 -4135 988 940 2579 123 57 0 chr5 111092374 111092779 -88537371 + MSTA LTR MaLR 1 428 0 415 250 62 35 chr5 111092779 111092871 -88537279 - MER57A-int LTR ERV1 -4183 940 841 1339 171 7 69 chr5 111092940 111093245 -88536905 - MER57A-int LTR ERV1 -6711 826 541 2796 199 19 6 chr5 111093283 111093815 -88536335 - MER57A-int LTR ERV1 -6998 539 1 535 204 0 9 chr5 111093817 111093925 -88536225 - MER57A LTR ERV1 -2 401 295 1557 199 18 6 chr5 111093964 111094300 -88535850 - L1MB3 LINE L1 -14 6169 5830 24 0 0 0 chr5 111094970 111094994 -88535156 + AT_rich Low_complexity Low_complexity 1 24 0 333 355 58 13 chr5 111095070 111095225 -88534925 - L2 LINE L2 -4 3268 3107 270 0 0 0 chr5 111095791 111095821 -88534329 + (TG)n Simple_repeat Simple_repeat 2 31 0 1178 115 0 0 chr5 111095855 111096020 -88534130 - AluSq SINE Alu 0 313 149 305 318 157 34 chr5 111096087 111096323 -88533827 - L2 LINE L2 -166 3106 2842 2322 148 50 2 chr5 111096427 111096826 -88533324 + MSTA LTR MaLR 1 418 -10 400 308 116 43 chr5 111097183 111097519 -88532631 - L2 LINE L2 -1152 2162 1787 2085 147 13 31 chr5 111097519 111097901 -88532249 + THE1C LTR MaLR 1 375 0 400 308 116 43 chr5 111097901 111097986 -88532164 - L2 LINE L2 -1527 1787 1710 187 387 16 0 chr5 111097979 111098041 -88532109 + MIR SINE MIR 50 112 -150 * 632 252 60 12 chr5 111098218 111098468 -88531682 + LTR37A LTR ERV1 139 400 -26 437 284 7 19 chr5 111098577 111098732 -88531418 - L2 LINE L2 -1558 1756 1604 6127 162 13 18 chr5 111098812 111100508 -88529642 - L1MA3 LINE L1 0 6305 4619 11737 206 24 12 chr5 111100508 111101325 -88528825 - L1PA16 LINE L1 -148 6018 5213 2268 100 0 3 chr5 111101325 111101635 -88528515 - AluY SINE Alu -2 309 1 11737 206 24 12 chr5 111101635 111104367 -88525783 - L1PA16 LINE L1 -953 5213 2435 340 246 76 8 chr5 111104503 111104621 -88525529 + L1M4 LINE L1 4390 4515 -1631 1940 195 46 25 chr5 111104865 111105321 -88524829 - MER31B LTR ERV1 0 661 1 1483 205 45 34 chr5 111105761 111106117 -88524033 - MER7C DNA MER2_type -242 360 1 740 238 157 9 chr5 111106117 111106339 -88523811 - LTR50 LTR ERVL -537 258 4 441 0 0 0 chr5 111106489 111106538 -88523612 + (CA)n Simple_repeat Simple_repeat 2 50 0 763 208 23 6 chr5 111106938 111107111 -88523039 + MER5B DNA MER1_type 3 178 0 22 35 0 0 chr5 111107218 111107247 -88522903 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 111107376 111107398 -88522752 + AT_rich Low_complexity Low_complexity 1 22 0 1329 180 30 72 chr5 111107498 111107730 -88522420 + MLT2D LTR ERVL 1 220 -194 1887 103 4 0 chr5 111107730 111108022 -88522128 - AluSx SINE Alu 0 321 29 1329 180 30 72 chr5 111108022 111108093 -88522057 + MLT2D LTR ERVL 220 292 -122 206 136 0 106 chr5 111108447 111108513 -88521637 + (TTTTTA)n Simple_repeat Simple_repeat 6 64 0 202 390 65 24 chr5 111109430 111109553 -88520597 + MER5A DNA MER1_type 5 132 -57 8033 159 16 6 chr5 111109557 111110993 -88519157 - L1PA14 LINE L1 -1200 4946 3497 5393 133 17 10 chr5 111110993 111111832 -88518318 + L1PA14 LINE L1 4951 5811 -350 2754 198 40 32 chr5 111111832 111112462 -88517688 - LTR27 LTR ERV1 0 636 2 5393 133 17 10 chr5 111112462 111112816 -88517334 + L1PA14 LINE L1 5811 6161 0 492 18 0 0 chr5 111113045 111113102 -88517048 + (TG)n Simple_repeat Simple_repeat 2 58 0 643 143 57 36 chr5 111114218 111114358 -88515792 - L1MA6 LINE L1 -10 6290 6148 887 172 10 61 chr5 111114377 111114575 -88515575 - MER20 DNA MER1_type -30 189 2 270 257 92 37 chr5 111115041 111115150 -88515000 + MER91C DNA MER1_type 4 118 -22 2010 99 7 7 chr5 111115223 111115507 -88514643 + AluSc SINE Alu 1 284 -25 485 146 0 0 chr5 111115514 111115596 -88514554 + (GA)n Simple_repeat Simple_repeat 1 82 0 721 132 125 0 chr5 111115763 111115907 -88514243 + LTR54 LTR ERV1 349 510 0 2088 124 116 10 chr5 111116784 111117171 -88512979 + MSTA LTR MaLR 1 428 0 242 208 0 19 chr5 111118524 111118577 -88511573 + GA-rich Low_complexity Low_complexity 4 55 0 825 229 176 33 chr5 111118577 111118975 -88511175 + LTR16A1 LTR ERVL 1 455 -2 336 48 0 0 chr5 111119530 111119572 -88510578 + (TG)n Simple_repeat Simple_repeat 1 42 0 265 264 61 101 chr5 111119718 111119995 -88510155 - L1MC/D LINE L1 -1921 5887 5622 25 0 0 0 chr5 111120179 111120204 -88509946 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 111122785 111122810 -88507340 + AT_rich Low_complexity Low_complexity 1 25 0 355 286 0 59 chr5 111123402 111123521 -88506629 - MIR3 SINE MIR -5 203 92 45 34 0 0 chr5 111123855 111123914 -88506236 + AT_rich Low_complexity Low_complexity 1 59 0 360 331 31 25 chr5 111124865 111125028 -88505122 - MIR SINE MIR -15 247 84 582 357 101 42 chr5 111125245 111125270 -88504880 + L2 LINE L2 2472 2494 -819 1488 73 10 0 chr5 111125270 111125474 -88504676 + L1PA7 LINE L1 5945 6150 -4 582 357 101 42 chr5 111125474 111126249 -88503901 + L2 LINE L2 2494 3313 0 250 284 134 30 chr5 111126669 111126803 -88503347 - L2 LINE L2 -574 2740 2593 1730 261 76 30 chr5 111128515 111129082 -88501068 - MLT1E LTR MaLR 0 593 1 942 340 41 68 chr5 111129104 111129991 -88500159 + HERVL LTR ERVL 3667 4529 -1125 735 305 14 32 chr5 111130001 111130280 -88499870 + LTR16A LTR ERVL 172 445 -5 23 0 0 0 chr5 111130984 111131007 -88499143 + AT_rich Low_complexity Low_complexity 1 23 0 716 255 151 85 chr5 111131110 111131508 -88498642 - MLT1G1 LTR MaLR -182 385 1 350 368 16 27 chr5 111131528 111131713 -88498437 - L2 LINE L2 -233 3080 2898 2203 300 147 42 chr5 111131782 111132615 -88497535 - L2 LINE L2 -746 2568 1824 2555 35 0 19 chr5 111132615 111132932 -88497218 + AluY SINE Alu 1 311 0 2203 300 147 42 chr5 111132932 111133583 -88496567 - L2 LINE L2 -1490 1824 928 568 257 88 0 chr5 111136289 111136515 -88493635 - HAL1 LINE L1 -336 2171 1926 771 200 35 75 chr5 111136515 111136715 -88493435 - LTR40a LTR ERVL -324 195 4 394 275 18 0 chr5 111136718 111136827 -88493323 - L1M4 LINE L1 -1303 4843 4733 873 297 132 42 chr5 111137096 111137919 -88492231 - L1M4 LINE L1 -1722 4424 3528 300 27 0 0 chr5 111137934 111137971 -88492179 + (TG)n Simple_repeat Simple_repeat 1 37 0 436 300 130 23 chr5 111138388 111138735 -88491415 - L1M4 LINE L1 -2867 3279 2896 332 298 98 63 chr5 111138893 111139148 -88491002 - L1M4 LINE L1 -3627 2519 2256 21 0 0 0 chr5 111139286 111139307 -88490843 + AT_rich Low_complexity Low_complexity 1 21 0 269 283 40 45 chr5 111139717 111139940 -88490210 - HAL1b LINE L1 -806 542 321 221 271 0 0 chr5 111140108 111140167 -88489983 + T-rich Low_complexity Low_complexity 1 59 0 23 0 0 0 chr5 111141024 111141047 -88489103 + AT_rich Low_complexity Low_complexity 1 23 0 309 276 30 139 chr5 111141261 111141627 -88488523 - HAL1 LINE L1 -2180 327 2 363 221 0 0 chr5 111141636 111141713 -88488437 - AluJ/FRAM SINE Alu -2 300 224 7081 47 71 0 chr5 111141718 111142821 -88487329 - L1PA5 LINE L1 -1 6153 5025 382 391 16 27 chr5 111142947 111143131 -88487019 - MER5A DNA MER1_type 0 189 8 222 118 0 0 chr5 111143764 111143798 -88486352 + (TTCCC)n Simple_repeat Simple_repeat 3 36 0 1887 141 16 3 chr5 111143798 111144104 -88486046 - AluSx SINE Alu -2 310 1 28 29 0 0 chr5 111144304 111144339 -88485811 + AT_rich Low_complexity Low_complexity 1 35 0 420 275 9 0 chr5 111144519 111144628 -88485522 - MIR SINE MIR -8 254 145 854 205 125 0 chr5 111144630 111144728 -88485422 + L1MA9 LINE L1 6054 6138 -174 285 29 0 0 chr5 111144728 111144762 -88485388 + (CA)n Simple_repeat Simple_repeat 1 34 0 854 205 125 0 chr5 111144762 111144895 -88485255 + L1MA9 LINE L1 6138 6312 0 297 384 16 0 chr5 111144901 111145026 -88485124 - MIR SINE MIR -130 132 6 349 274 12 0 chr5 111146101 111146185 -88483965 + L2 LINE L2 3229 3313 0 214 26 79 0 chr5 111146242 111146280 -88483870 + T-rich Low_complexity Low_complexity 1 41 0 343 141 0 0 chr5 111146300 111146371 -88483779 - L1 LINE L1 -1314 4832 4762 1986 185 165 19 chr5 111146414 111146894 -88483256 - MER44D DNA MER2_type 0 605 1 464 173 18 0 chr5 111146894 111146992 -88483158 - L1MA8 LINE L1 -29 6262 6168 251 298 149 26 chr5 111149126 111149415 -88480735 + L3 LINE CR1 998 1384 -193 243 353 12 0 chr5 111149399 111149484 -88480666 + L2 LINE L2 3174 3259 -13 * 497 269 6 70 chr5 111149490 111149661 -88480489 + L3 LINE CR1 1394 1553 -24 1089 140 27 11 chr5 111149801 111149987 -88480163 - Tigger2 DNA MER2_type -69 2649 2461 3702 122 71 79 chr5 111150053 111150800 -88479350 - Tigger2 DNA MER2_type -1974 744 4 258 284 29 0 chr5 111150803 111150905 -88479245 - L1M4 LINE L1 -1807 4619 4515 188 130 22 0 chr5 111150934 111150980 -88479170 + (TA)n Simple_repeat Simple_repeat 1 47 0 275 189 20 7 chr5 111151016 111151164 -88478986 + (TA)n Simple_repeat Simple_repeat 1 150 0 7507 185 25 55 chr5 111151164 111152952 -88477198 - L1MCa LINE L1 -4564 1862 19 26 0 0 0 chr5 111153725 111153751 -88476399 + AT_rich Low_complexity Low_complexity 1 26 0 26 74 0 0 chr5 111153970 111154024 -88476126 + AT_rich Low_complexity Low_complexity 1 54 0 242 138 17 0 chr5 111154388 111154446 -88475704 + (TG)n Simple_repeat Simple_repeat 1 59 0 628 325 103 57 chr5 111154536 111155408 -88474742 - L2 LINE L2 -552 2762 1851 30 45 0 0 chr5 111155451 111155495 -88474655 + AT_rich Low_complexity Low_complexity 1 44 0 24 0 0 0 chr5 111156198 111156222 -88473928 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 111156248 111156270 -88473880 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr5 111156884 111156918 -88473232 + AT_rich Low_complexity Low_complexity 1 34 0 278 204 28 157 chr5 111156970 111157078 -88473072 - L2 LINE L2 -1 3312 3219 23 0 0 0 chr5 111157519 111157542 -88472608 + AT_rich Low_complexity Low_complexity 1 23 0 237 303 14 56 chr5 111157947 111158089 -88472061 - LTR67 LTR ERVL -17 540 405 21 57 0 0 chr5 111159245 111159280 -88470870 + AT_rich Low_complexity Low_complexity 1 35 0 1949 135 14 0 chr5 111159915 111160211 -88469939 - AluSx SINE Alu -4 308 9 203 229 16 0 chr5 111161119 111161180 -88468970 + CT-rich Low_complexity Low_complexity 2 63 0 1185 211 132 33 chr5 111161256 111161621 -88468529 - MER50 LTR ERV1 0 734 334 1727 173 10 10 chr5 111162979 111163280 -88466870 + AluJo SINE Alu 3 303 -9 422 295 216 0 chr5 111164166 111164305 -88465845 - MER91A DNA MER1_type -26 170 2 550 167 18 181 chr5 111165397 111165624 -88464526 - 7SK RNA RNA 0 193 4 634 269 30 106 chr5 111169825 111170156 -88459994 - L2 LINE L2 0 3313 3008 1990 166 8 17 chr5 111170509 111170871 -88459279 + MLT1A1 LTR MaLR 7 365 0 207 362 98 25 chr5 111171002 111171165 -88458985 + L2 LINE L2 2469 2643 -671 263 242 72 92 chr5 111171941 111172094 -88458056 - MER5A DNA MER1_type 0 178 29 324 351 137 8 chr5 111172160 111172291 -88457859 + L2 LINE L2 3122 3269 -3 333 0 0 0 chr5 111173342 111173379 -88456771 + (CA)n Simple_repeat Simple_repeat 1 37 0 1713 158 24 4 chr5 111173861 111174171 -88455979 + L1MA9 LINE L1 5798 6114 -198 * 2467 91 28 0 chr5 111174161 111174524 -88455626 - L1P LINE L1 -817 5329 4957 3268 49 0 16 chr5 111174525 111174954 -88455196 + L1PA7 LINE L1 5722 6143 -11 264 279 29 0 chr5 111175173 111175241 -88454909 + MIR3 SINE MIR 108 177 -31 408 313 124 48 chr5 111175300 111175706 -88454444 - L2 LINE L2 -32 3281 2807 1863 139 27 14 chr5 111175706 111176001 -88454149 + AluSx SINE Alu 3 301 -11 408 313 124 48 chr5 111176001 111176149 -88454001 - L2 LINE L2 -506 2807 2672 463 289 23 8 chr5 111176460 111176588 -88453562 - LTR33 LTR ERVL -362 159 30 320 248 120 68 chr5 111176631 111176764 -88453386 - MIR SINE MIR -75 187 48 3102 70 5 14 chr5 111177719 111178148 -88452002 - L1PA7 LINE L1 -31 6123 5699 228 67 0 0 chr5 111181161 111181191 -88448959 + (A)n Simple_repeat Simple_repeat 1 30 0 264 59 0 0 chr5 111181835 111181869 -88448281 + (A)n Simple_repeat Simple_repeat 1 34 0 722 263 71 21 chr5 111182263 111182503 -88447647 - MIR SINE MIR -8 254 3 424 261 44 67 chr5 111182536 111182716 -88447434 + MER5B DNA MER1_type 3 178 0 187 333 45 0 chr5 111182722 111182788 -88447362 - L2 LINE L2 -42 3271 3203 904 188 111 10 chr5 111182791 111182999 -88447151 - MLT1D LTR MaLR 0 505 277 619 209 98 13 chr5 111183004 111183157 -88446993 - MLT1D LTR MaLR -337 168 3 183 229 0 0 chr5 111183391 111183426 -88446724 - MER5A DNA MER1_type 0 189 155 306 255 61 20 chr5 111183937 111184035 -88446115 + MIR SINE MIR 126 227 -35 21 0 0 0 chr5 111184048 111184069 -88446081 + AT_rich Low_complexity Low_complexity 1 21 0 250 330 20 20 chr5 111185025 111185125 -88445025 - MIR SINE MIR -150 112 13 315 0 0 0 chr5 111185294 111185329 -88444821 + (TG)n Simple_repeat Simple_repeat 2 36 0 23 0 0 0 chr5 111185601 111185624 -88444526 + AT_rich Low_complexity Low_complexity 1 23 0 204 40 0 0 chr5 111185659 111185684 -88444466 + (TA)n Simple_repeat Simple_repeat 1 25 0 2018 261 30 36 chr5 111186607 111187212 -88442938 + L1M4 LINE L1 7 607 -5935 3458 217 84 20 chr5 111187213 111188361 -88441789 + L1M4 LINE L1 738 1957 -4689 632 221 0 21 chr5 111388362 111388502 -88241648 + MER39 LTR ERV1 564 700 -7 1126 256 26 46 chr5 111388612 111389050 -88241100 - MER101B LTR ERV1 0 474 1 427 355 41 0 chr5 111389152 111389324 -88240826 + MER5A DNA MER1_type 11 189 0 23 54 0 0 chr5 111389699 111389736 -88240414 + AT_rich Low_complexity Low_complexity 1 37 0 234 288 0 0 chr5 111389741 111389800 -88240350 - MIR SINE MIR -15 247 189 3286 183 51 3 chr5 111390016 111390643 -88239507 + Tigger1 DNA MER2_type 1 657 -1761 * 6007 152 9 28 chr5 111390636 111391052 -88239098 + Tigger1 DNA MER2_type 901 1323 -1095 180 0 0 0 chr5 111391052 111391072 -88239078 + (TA)n Simple_repeat Simple_repeat 2 21 0 6007 152 9 28 chr5 111391072 111391635 -88238515 + Tigger1 DNA MER2_type 1323 1861 -557 2442 60 0 0 chr5 111391635 111391934 -88238216 + AluY SINE Alu 1 299 -12 6007 152 9 28 chr5 111391934 111392036 -88238114 + Tigger1 DNA MER2_type 1861 1963 -455 1485 155 49 11 chr5 111392058 111392323 -88237827 + Tigger1 DNA MER2_type 2144 2418 0 261 192 19 0 chr5 111392327 111392379 -88237771 - MER103 DNA DNA -76 90 38 28 29 0 0 chr5 111392430 111392465 -88237685 + AT_rich Low_complexity Low_complexity 1 35 0 632 100 0 0 chr5 111392651 111392741 -88237409 - AluSg/x SINE Alu -4 305 216 205 162 0 0 chr5 111392788 111392825 -88237325 + (TG)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr5 111392882 111392903 -88237247 + AT_rich Low_complexity Low_complexity 1 21 0 1900 171 36 33 chr5 111394804 111395166 -88234984 + THE1B LTR MaLR 1 363 -1 226 266 136 30 chr5 111395245 111395414 -88234736 - L1MC/D LINE L1 -2271 5537 5351 189 154 0 0 chr5 111395469 111395508 -88234642 + (CA)n Simple_repeat Simple_repeat 2 40 0 224 29 0 29 chr5 111396084 111396118 -88234032 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 219 282 0 0 chr5 111399337 111399422 -88230728 + A-rich Low_complexity Low_complexity 2 86 0 23 33 0 0 chr5 111399494 111399524 -88230626 + AT_rich Low_complexity Low_complexity 1 30 0 338 302 157 51 chr5 111399714 111400286 -88229864 + L1MC3 LINE L1 5270 5902 -1906 538 285 81 37 chr5 111400302 111400548 -88229602 + MIR SINE MIR 6 262 0 27 49 0 0 chr5 111400847 111400888 -88229262 + AT_rich Low_complexity Low_complexity 1 41 0 1972 43 47 0 chr5 111401034 111401287 -88228863 - AluY SINE Alu -13 298 34 3444 190 102 62 chr5 111402140 111402287 -88227863 + L1MC3 LINE L1 6708 6848 -937 567 0 0 0 chr5 111402287 111402350 -88227800 + (CA)n Simple_repeat Simple_repeat 2 64 0 3444 190 102 62 chr5 111402350 111402575 -88227575 + L1MC3 LINE L1 6848 7063 -722 243 222 0 0 chr5 111402575 111402620 -88227530 + MLT1F1 LTR MaLR 45 89 -478 3444 190 102 62 chr5 111402620 111403226 -88226924 + L1MC3 LINE L1 7063 7772 -13 962 278 0 0 chr5 111404010 111404219 -88225931 + MER58A DNA MER1_type 16 224 0 22 0 0 0 chr5 111404784 111404806 -88225344 + AT_rich Low_complexity Low_complexity 1 22 0 349 278 68 36 chr5 111404826 111405171 -88224979 + L1ME1 LINE L1 2049 2376 -3839 261 0 0 0 chr5 111405508 111405537 -88224613 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1755 152 11 3 chr5 111405554 111405837 -88224313 - AluSx SINE Alu -27 285 1 24 0 0 0 chr5 111406350 111406374 -88223776 + AT_rich Low_complexity Low_complexity 1 24 0 354 125 78 0 chr5 111406953 111407017 -88223133 + MER41B LTR ERV1 567 635 0 2077 143 3 0 chr5 111407397 111407705 -88222445 + AluSx SINE Alu 3 311 -1 41 48 0 0 chr5 111407776 111407838 -88222312 + AT_rich Low_complexity Low_complexity 1 62 0 1782 264 73 40 chr5 111409657 111409780 -88220370 + L1ME1 LINE L1 2811 2928 -3287 297 51 0 0 chr5 111409780 111409819 -88220331 + (CA)n Simple_repeat Simple_repeat 2 40 0 1782 264 73 40 chr5 111409819 111410668 -88219482 + L1ME1 LINE L1 2928 3815 -2400 393 22 0 0 chr5 111410676 111410722 -88219428 + (TG)n Simple_repeat Simple_repeat 1 46 0 497 232 54 12 chr5 111410766 111410934 -88219216 + L1ME1 LINE L1 4959 5133 -1082 282 289 62 0 chr5 111411005 111411102 -88219048 + L1ME1 LINE L1 5228 5330 -885 2459 251 42 30 chr5 111411177 111411971 -88218179 + L1ME1 LINE L1 5362 6164 -71 781 276 47 24 chr5 111412047 111412428 -88217722 + L1M4 LINE L1 3181 3570 -2576 6101 74 18 30 chr5 111413100 111414714 -88215436 + L1PA10 LINE L1 4548 6152 -16 1221 184 115 0 chr5 111414739 111414983 -88215167 + AluJo SINE Alu 7 278 -34 191 200 0 20 chr5 111415582 111415632 -88214518 + CT-rich Low_complexity Low_complexity 2 50 0 2080 122 7 0 chr5 111415899 111416194 -88213956 + AluSx SINE Alu 1 297 -15 8812 202 50 25 chr5 111416262 111418318 -88211832 + L1MC3 LINE L1 5536 7643 -142 2099 87 44 0 chr5 111418522 111418820 -88211330 - AluY SINE Alu 0 311 1 206 250 0 50 chr5 111419587 111419647 -88210503 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 263 324 78 0 chr5 111421066 111421168 -88208982 + L2 LINE L2 2216 2325 -989 2509 55 3 0 chr5 111421238 111421546 -88208604 - AluY SINE Alu -2 309 1 1230 172 0 19 chr5 111421546 111421761 -88208389 + AluJo SINE Alu 102 312 0 218 286 8 40 chr5 111422692 111422818 -88207332 + T-rich Low_complexity Low_complexity 5 126 0 198 0 0 0 chr5 111422818 111422840 -88207310 + (TTA)n Simple_repeat Simple_repeat 3 24 0 41648 39 25 2 chr5 111422840 111428833 -88201317 - L1PA3 LINE L1 -18 6137 1 4151 139 40 51 chr5 111429524 111430423 -88199727 + L1MA9 LINE L1 5417 6305 -7 237 333 13 0 chr5 111433139 111433217 -88196933 - MIR3 SINE MIR -54 154 76 186 103 0 0 chr5 111433712 111433741 -88196409 + (TTA)n Simple_repeat Simple_repeat 3 31 0 288 212 0 0 chr5 111434324 111434390 -88195760 + GA-rich Low_complexity Low_complexity 3 68 0 21 57 0 0 chr5 111435676 111435711 -88194439 + AT_rich Low_complexity Low_complexity 1 35 0 987 220 62 13 chr5 111436394 111436699 -88193451 + MER33 DNA MER1_type 1 320 -4 8474 26 0 4 chr5 111437660 111439440 -88190710 + L1PA4 LINE L1 4379 6155 0 350 340 10 49 chr5 111440364 111440567 -88189583 + L2 LINE L2 3113 3307 -6 461 233 45 68 chr5 111441022 111441288 -88188862 + L1MC5 LINE L1 7313 7572 -389 22 0 0 0 chr5 111441315 111441337 -88188813 + AT_rich Low_complexity Low_complexity 1 22 0 33 66 0 0 chr5 111441946 111442007 -88188143 + AT_rich Low_complexity Low_complexity 1 61 0 1344 125 0 39 chr5 111443208 111443440 -88186710 - AluSg/x SINE Alu -7 305 83 748 269 23 8 chr5 111443443 111443703 -88186447 + L1M4 LINE L1 4013 4276 -1870 1967 123 3 3 chr5 111443721 111444045 -88186105 - AluSx SINE Alu 0 324 1 35 0 0 0 chr5 111445536 111445571 -88184579 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 111445727 111445758 -88184392 + AT_rich Low_complexity Low_complexity 1 31 0 724 275 147 65 chr5 111445793 111446407 -88183743 - L1ME3 LINE L1 -115 6047 5384 294 265 61 44 chr5 111446423 111446604 -88183546 - L1ME3 LINE L1 -804 5342 5159 231 257 50 84 chr5 111446894 111447096 -88183054 - MER97c DNA MER1_type? -81 1009 815 1829 196 150 9 chr5 111447390 111447849 -88182301 - MER97a DNA MER1_type? -359 535 12 192 343 43 0 chr5 111448420 111448490 -88181660 - L2 LINE L2 -2 3311 3239 7218 192 71 66 chr5 111451549 111452720 -88177430 - L1PA7 LINE L1 -599 5555 4392 4235 75 19 8 chr5 111452720 111453306 -88176844 + L1PA7 LINE L1 5556 6150 -4 7218 192 71 66 chr5 111453306 111455124 -88175026 - L1P3 LINE L1 -1762 4392 2550 509 152 54 18 chr5 111455115 111455227 -88174923 + L1P LINE L1 4432 4547 -1599 * 3735 175 31 3 chr5 111455227 111455929 -88174221 + L1MC1 LINE L1 5606 6328 -5 492 325 26 48 chr5 111456455 111456723 -88173427 + MIR SINE MIR 1 262 0 21 0 0 0 chr5 111457168 111457189 -88172961 + GC_rich Low_complexity Low_complexity 1 21 0 247 287 238 10 chr5 111458721 111458822 -88171328 - L2 LINE L2 -4 3268 3145 190 307 176 6 chr5 111458926 111459085 -88171065 - L2 LINE L2 -6 3307 3119 643 345 48 8 chr5 111459085 111459334 -88170816 + MIR SINE MIR 3 261 -1 32 26 0 0 chr5 111460978 111461017 -88169133 + AT_rich Low_complexity Low_complexity 1 39 0 233 246 136 9 chr5 111461559 111461669 -88168481 + L1ME4a LINE L1 5988 6111 -10 418 218 11 0 chr5 111463201 111463288 -88166862 + MER58B DNA MER1_type 254 341 0 2344 70 3 0 chr5 111463549 111463848 -88166302 - AluSp SINE Alu -13 300 1 1722 184 16 30 chr5 111463932 111464302 -88165848 - MLT1A1 LTR MaLR 0 365 1 319 339 88 19 chr5 111465699 111465959 -88164191 + L1M4 LINE L1 4335 4612 -1534 3442 221 81 29 chr5 111466061 111467086 -88163064 + L1MC3 LINE L1 6708 7785 0 1933 326 93 16 chr5 111467231 111468651 -88161499 - L2 LINE L2 -2 3311 1785 522 155 0 0 chr5 111468754 111468851 -88161299 + GA-rich Low_complexity Low_complexity 3 99 0 209 259 35 0 chr5 111468914 111468999 -88161151 + (TA)n Simple_repeat Simple_repeat 1 88 0 21 0 0 0 chr5 111469047 111469068 -88161082 + AT_rich Low_complexity Low_complexity 1 21 0 528 277 61 36 chr5 111470862 111471191 -88158959 - L1ME4a LINE L1 -229 5892 5556 207 200 0 0 chr5 111471344 111471389 -88158761 + (TA)n Simple_repeat Simple_repeat 2 46 0 213 154 0 0 chr5 111472087 111472126 -88158024 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 27 0 0 0 chr5 111473344 111473371 -88156779 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr5 111474392 111474414 -88155736 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr5 111475430 111475473 -88154677 + AT_rich Low_complexity Low_complexity 1 43 0 411 293 152 10 chr5 111475480 111475678 -88154472 - MIR SINE MIR -27 235 10 29 0 0 0 chr5 111475924 111475953 -88154197 + AT_rich Low_complexity Low_complexity 1 29 0 186 425 7 22 chr5 111476077 111476216 -88153934 + MIR3 SINE MIR 49 185 -23 23 33 0 0 chr5 111476263 111476293 -88153857 + AT_rich Low_complexity Low_complexity 1 30 0 252 259 153 0 chr5 111476667 111476752 -88153398 + MIR SINE MIR 31 128 -134 5652 132 6 0 chr5 111476818 111478083 -88152067 - L1PA16 LINE L1 -9 6157 4878 4795 98 6 0 chr5 111478615 111479309 -88150841 - L1P LINE L1 -801 5345 4648 6721 56 3 1 chr5 111479329 111480186 -88149964 + L1PA7 LINE L1 5296 6154 0 21 57 0 0 chr5 111482127 111482162 -88147988 + AT_rich Low_complexity Low_complexity 1 35 0 420 20 0 0 chr5 111482718 111482767 -88147383 + (TG)n Simple_repeat Simple_repeat 1 49 0 4623 31 0 0 chr5 111482881 111483433 -88146717 - L1P LINE L1 -1595 4551 4000 6995 24 0 0 chr5 111483433 111484252 -88145898 + L1PA3 LINE L1 5336 6155 0 455 234 9 27 chr5 111484481 111484592 -88145558 - MER58B DNA MER1_type 0 341 233 435 147 116 0 chr5 111484593 111484688 -88145462 + L1MA3 LINE L1 5713 5818 -487 3951 114 7 0 chr5 111484688 111485276 -88144874 + L1PB1 LINE L1 5556 6147 -4 2812 129 10 20 chr5 111485290 111485786 -88144364 + L1MA3 LINE L1 5815 6305 0 734 211 26 0 chr5 111485790 111485946 -88144204 - Tigger1 DNA MER2_type -2187 231 72 21 36 0 0 chr5 111486807 111486835 -88143315 + AT_rich Low_complexity Low_complexity 1 28 0 411 303 38 73 chr5 111487069 111487412 -88142738 - L1ME3A LINE L1 -289 5881 5551 13203 163 22 24 chr5 111487979 111488171 -88141979 + Tigger1 DNA MER2_type 1 192 -2226 225 0 0 0 chr5 111488171 111488196 -88141954 + (TTA)n Simple_repeat Simple_repeat 3 27 0 13203 163 22 24 chr5 111488196 111489837 -88140313 + Tigger1 DNA MER2_type 192 1835 -583 1410 34 0 6 chr5 111489837 111490012 -88140138 - L1PA5 LINE L1 -2 6152 5979 13203 163 22 24 chr5 111490012 111490272 -88139878 + Tigger1 DNA MER2_type 1835 2094 -324 1890 135 31 60 chr5 111490272 111490658 -88139492 + THE1C LTR MaLR 1 375 0 13203 163 22 24 chr5 111490658 111490984 -88139166 + Tigger1 DNA MER2_type 2094 2417 -1 908 177 19 0 chr5 111492251 111492409 -88137741 + Tigger5 DNA MER2_type 2163 2323 0 626 222 0 0 chr5 111492607 111492733 -88137417 - FLAM_A SINE Alu -6 136 11 306 0 0 0 chr5 111493050 111493084 -88137066 + (TC)n Simple_repeat Simple_repeat 2 35 0 * 369 0 0 0 chr5 111493083 111493124 -88137026 + (TA)n Simple_repeat Simple_repeat 2 42 0 2001 145 0 0 chr5 111493215 111493512 -88136638 + AluSx SINE Alu 6 302 -10 25 31 0 0 chr5 111493561 111493593 -88136557 + AT_rich Low_complexity Low_complexity 1 32 0 7695 24 0 0 chr5 111493677 111495191 -88134959 - L1PA2 LINE L1 -2 6153 4640 12451 33 0 0 chr5 111495191 111496690 -88133460 + L1PA2 LINE L1 3121 4619 -1527 2065 154 0 0 chr5 111496792 111497104 -88133046 + AluSx SINE Alu 1 312 0 21 89 0 0 chr5 111497169 111497225 -88132925 + AT_rich Low_complexity Low_complexity 1 56 0 456 19 0 0 chr5 111497431 111497484 -88132666 + (TA)n Simple_repeat Simple_repeat 1 53 0 226 226 32 16 chr5 111498526 111498588 -88131562 + GA-rich Low_complexity Low_complexity 2 64 0 1465 228 9 16 chr5 111499221 111499537 -88130613 - MER70A LTR ERVL -69 403 90 274 286 0 26 chr5 111499533 111499610 -88130540 - MER70A LTR ERVL -310 162 88 * 28 29 0 0 chr5 111499688 111499723 -88130427 + AT_rich Low_complexity Low_complexity 1 35 0 689 210 8 0 chr5 111499739 111499863 -88130287 + FLAM_A SINE Alu 2 126 -7 287 276 118 0 chr5 111500872 111500999 -88129151 - L1MEd LINE L1 -5938 181 40 311 288 65 75 chr5 111501349 111501641 -88128509 + L1M4 LINE L1 2849 3137 -3009 344 225 0 72 chr5 111501866 111501977 -88128173 - HAL1b LINE L1 -768 580 478 2141 93 0 17 chr5 111502139 111502439 -88127711 - AluY SINE Alu -16 295 1 1926 147 27 24 chr5 111502560 111502934 -88127216 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr5 111504778 111504800 -88125350 + AT_rich Low_complexity Low_complexity 1 22 0 387 0 0 0 chr5 111504800 111504843 -88125307 + (CA)n Simple_repeat Simple_repeat 2 44 0 249 214 0 0 chr5 111505263 111505319 -88124831 + T-rich Low_complexity Low_complexity 1 56 0 210 71 0 0 chr5 111505321 111505349 -88124801 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 235 234 182 0 chr5 111505457 111505534 -88124616 + L2 LINE L2 3223 3313 0 222 62 0 0 chr5 111506114 111506146 -88124004 + (T)n Simple_repeat Simple_repeat 1 32 0 360 325 113 14 chr5 111506260 111506472 -88123678 - MIR SINE MIR -29 233 1 21 36 0 0 chr5 111506485 111506513 -88123637 + AT_rich Low_complexity Low_complexity 1 28 0 2400 271 81 64 chr5 111506513 111507685 -88122465 - HAL1 LINE L1 -10 2497 1291 1944 60 0 20 chr5 111507685 111507965 -88122185 - AluY SINE Alu 0 313 39 2400 271 81 64 chr5 111507965 111508296 -88121854 - HAL1 LINE L1 -1216 1291 967 502 244 52 30 chr5 111508316 111508451 -88121699 + MER63A DNA MER1_type 73 210 0 542 277 151 15 chr5 111508500 111508706 -88121444 - HAL1 LINE L1 -1637 870 637 1810 145 7 3 chr5 111508948 111509258 -88120892 + AluSx SINE Alu 1 311 0 2555 56 0 0 chr5 111510450 111510756 -88119394 + AluY SINE Alu 1 306 -5 2157 116 0 3 chr5 111511070 111511373 -88118777 + AluSq SINE Alu 1 302 -11 26 30 0 0 chr5 111512250 111512283 -88117867 + AT_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr5 111512859 111512904 -88117246 + AT_rich Low_complexity Low_complexity 1 45 0 234 294 289 0 chr5 111513103 111513297 -88116853 - MIR SINE MIR -8 254 5 253 269 0 14 chr5 111513391 111513532 -88116618 + (TA)n Simple_repeat Simple_repeat 1 139 0 42071 38 22 1 chr5 111513771 111519793 -88110357 - L1PA2 LINE L1 -3 6152 1 237 298 25 0 chr5 111519795 111519916 -88110234 + (TA)n Simple_repeat Simple_repeat 2 125 0 189 107 0 0 chr5 111520096 111520124 -88110026 + (A)n Simple_repeat Simple_repeat 1 28 0 24 32 0 0 chr5 111522717 111522748 -88107402 + AT_rich Low_complexity Low_complexity 1 31 0 289 382 32 0 chr5 111522935 111523058 -88107092 - MIR3 SINE MIR -48 160 34 493 309 83 0 chr5 111523485 111523689 -88106461 + MLT1K LTR MaLR 339 559 -29 222 261 127 97 chr5 111524625 111524790 -88105360 - L2 LINE L2 -43 3270 3101 616 314 103 59 chr5 111527049 111527827 -88102323 + L2 LINE L2 1832 2643 -671 280 153 169 0 chr5 111527840 111527899 -88102251 + MER116 DNA Mariner 8 76 -4 3359 73 2 0 chr5 111528990 111529441 -88100709 - L1P LINE L1 -1401 4745 4294 3459 94 4 0 chr5 111529441 111529929 -88100221 + L1PA6 LINE L1 5660 6150 -4 17112 201 30 11 chr5 111529932 111536223 -88093927 + L1P4 LINE L1 2 6424 -395 555 68 2 10 chr5 111536215 111536300 -88093850 - L1PA2 LINE L1 -178 5990 5909 * 281 29 0 0 chr5 111536293 111536366 -88093784 + L1PA2 LINE L1 6108 6180 0 * 568 286 58 68 chr5 111536381 111537015 -88093135 + L1MEc LINE L1 1032 1659 -4737 226 274 101 46 chr5 111537421 111537728 -88092422 + L1ME LINE L1 1391 1714 -5217 705 331 102 43 chr5 111537795 111538746 -88091404 + L1MEc LINE L1 125 1131 -5265 447 262 104 27 chr5 111538749 111538932 -88091218 + Zaphod DNA AcHobo 397 593 -3438 952 234 89 3 chr5 111539009 111539380 -88090770 + Zaphod DNA AcHobo 3338 3740 -291 1410 277 25 25 chr5 111539399 111539916 -88090234 + LTR40a LTR ERVL 3 519 0 187 233 20 130 chr5 111540031 111540177 -88089973 + L2 LINE L2 3108 3237 -76 36 0 0 0 chr5 111541058 111541094 -88089056 + AT_rich Low_complexity Low_complexity 1 36 0 6463 77 0 0 chr5 111542243 111543367 -88086783 - L1PA6 LINE L1 -2 6152 5023 4707 136 17 0 chr5 111543989 111544747 -88085403 + L1PA13 LINE L1 5385 6155 -8 1692 237 84 25 chr5 111544986 111545476 -88084674 + LTR40a LTR ERVL 1 519 0 856 266 42 73 chr5 111545480 111545522 -88084628 - MLT1F LTR MaLR 0 542 500 2480 60 0 0 chr5 111545522 111545823 -88084327 - AluY SINE Alu -6 305 5 856 266 42 73 chr5 111545823 111546137 -88084013 - MLT1F LTR MaLR -42 500 197 245 276 31 51 chr5 111546179 111546277 -88083873 - MLT1F LTR MaLR -444 98 3 1522 199 7 10 chr5 111547793 111548094 -88082056 - AluJb SINE Alu -12 300 1 438 326 154 23 chr5 111548323 111548796 -88081354 + L1ME LINE L1 80 614 -5809 894 281 98 62 chr5 111548886 111549599 -88080551 + L1ME LINE L1 794 1532 -4891 1099 293 58 34 chr5 111549635 111549965 -88080185 + L1ME LINE L1 1800 2121 -5001 423 0 0 0 chr5 111549965 111550012 -88080138 + (GGAA)n Simple_repeat Simple_repeat 2 48 0 1099 293 58 34 chr5 111550012 111550392 -88079758 + L1ME LINE L1 2121 2527 -4595 201 178 0 0 chr5 111550545 111550590 -88079560 + (ATG)n Simple_repeat Simple_repeat 2 46 0 402 313 49 6 chr5 111550593 111550756 -88079394 - MIR SINE MIR -30 232 63 207 226 0 32 chr5 111551486 111551548 -88078602 + A-rich Low_complexity Low_complexity 5 64 0 476 296 67 49 chr5 111551675 111551898 -88078252 + MLT1I LTR MaLR 125 351 -58 25 75 0 0 chr5 111552874 111552927 -88077223 + AT_rich Low_complexity Low_complexity 1 53 0 253 311 126 7 chr5 111553948 111554083 -88076067 - L2 LINE L2 0 3313 3163 3002 280 98 39 chr5 111554654 111555563 -88074587 - L1MCc LINE L1 -4918 1505 482 1681 136 75 0 chr5 111555563 111555842 -88074308 + AluSx SINE Alu 6 305 -7 3002 280 98 39 chr5 111555842 111556338 -88073812 - L1MCc LINE L1 -5941 482 17 23 33 0 0 chr5 111556339 111556369 -88073781 + AT_rich Low_complexity Low_complexity 1 30 0 330 348 87 14 chr5 111556789 111556927 -88073223 + MER5A DNA MER1_type 18 165 -24 23 0 0 0 chr5 111557293 111557316 -88072834 + AT_rich Low_complexity Low_complexity 1 23 0 287 312 69 37 chr5 111557744 111557962 -88072188 + MLT1K LTR MaLR 357 581 -7 21 0 0 0 chr5 111557987 111558008 -88072142 + AT_rich Low_complexity Low_complexity 1 21 0 37 69 0 0 chr5 111558317 111558389 -88071761 + AT_rich Low_complexity Low_complexity 1 72 0 26 64 0 0 chr5 111558440 111558487 -88071663 + AT_rich Low_complexity Low_complexity 1 47 0 1890 248 58 36 chr5 111559394 111560035 -88070115 - MLT1E3 LTR MaLR 0 624 1 856 232 102 71 chr5 111560288 111560642 -88069508 - MLT1A1 LTR MaLR 0 365 1 3092 155 25 6 chr5 111561362 111561879 -88068271 - MER1A DNA MER1_type 0 527 1 214 162 0 0 chr5 111562397 111562434 -88067716 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 282 29 0 0 chr5 111563098 111563133 -88067017 + (CA)n Simple_repeat Simple_repeat 2 36 0 1403 214 81 37 chr5 111563185 111563592 -88066558 - LTR56 LTR ERV1 -20 425 1 24 32 0 0 chr5 111563659 111563690 -88066460 + AT_rich Low_complexity Low_complexity 1 31 0 281 39 29 0 chr5 111564731 111564783 -88065367 + L1PA6 LINE L1 6101 6154 0 21 0 0 0 chr5 111565170 111565191 -88064959 + AT_rich Low_complexity Low_complexity 1 21 0 263 348 119 0 chr5 111565605 111565723 -88064427 + L3b LINE CR1 1319 1450 -133 372 22 0 0 chr5 111566064 111566109 -88064041 + (CA)n Simple_repeat Simple_repeat 1 45 0 784 274 106 99 chr5 111567529 111568399 -88061751 - L2 LINE L2 0 3313 2431 303 218 50 50 chr5 111568512 111568613 -88061537 - HAL1 LINE L1 -1469 1038 938 31 0 0 0 chr5 111569700 111569731 -88060419 + AT_rich Low_complexity Low_complexity 1 31 0 409 282 221 0 chr5 111570180 111570393 -88059757 - L1MC/D LINE L1 -2094 5714 5455 41859 36 1 3 chr5 111570682 111576569 -88053581 - L1PA4 LINE L1 0 6155 280 204 53 0 53 chr5 111576614 111576652 -88053498 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 247 319 32 83 chr5 111577114 111577271 -88052879 + L2 LINE L2 3124 3272 0 21 71 0 0 chr5 111577316 111577358 -88052792 + AT_rich Low_complexity Low_complexity 1 42 0 954 111 15 0 chr5 111577477 111577612 -88052538 - AluY SINE Alu -18 293 157 1175 325 96 12 chr5 111577743 111578235 -88051915 + L3 LINE CR1 184 716 -861 344 351 99 47 chr5 111578284 111578728 -88051422 + L3 LINE CR1 962 1428 -149 13845 176 33 4 chr5 111578771 111581223 -88048927 + L1MA3 LINE L1 17 2540 -5025 1952 147 18 65 chr5 111581323 111581651 -88048499 + L1MA3 LINE L1 3301 3643 -3922 2351 85 0 25 chr5 111581651 111581968 -88048182 + AluSc SINE Alu 1 309 0 1952 147 18 65 chr5 111581968 111582362 -88047788 + L1MA3 LINE L1 3643 4007 -3558 6220 148 18 21 chr5 111582369 111584020 -88046130 + L1MA3 LINE L1 6079 7724 0 900 224 91 8 chr5 111584497 111584761 -88045389 - L1ME1 LINE L1 -4 6162 5877 207 211 0 0 chr5 111585684 111585722 -88044428 + L2 LINE L2 3274 3311 -2 4278 229 56 67 chr5 111586800 111586862 -88043288 + L1MD2 LINE L1 3986 4047 -2312 2385 72 0 0 chr5 111586862 111587166 -88042984 + AluY SINE Alu 1 304 -7 4278 229 56 67 chr5 111587166 111587399 -88042751 + L1MD2 LINE L1 4047 4281 -2078 1991 130 3 0 chr5 111587399 111587684 -88042466 - AluSq SINE Alu -27 286 1 4278 229 56 67 chr5 111587684 111589690 -88040460 + L1MD2 LINE L1 4281 6255 -104 1979 153 7 0 chr5 111589690 111589997 -88040153 + AluSx SINE Alu 4 312 0 4278 229 56 67 chr5 111589997 111590086 -88040064 + L1MD2 LINE L1 6255 6343 -16 650 356 57 25 chr5 111591308 111591710 -88038440 - L3 LINE CR1 -102 1475 1061 588 294 11 93 chr5 111591825 111592094 -88038056 + L2 LINE L2 2490 2736 -578 516 219 17 25 chr5 111592126 111592245 -88037905 + L2 LINE L2 3178 3295 -18 264 396 22 41 chr5 111593321 111593639 -88036511 - L3 LINE CR1 -1055 522 211 303 49 0 0 chr5 111594756 111594797 -88035353 + (CA)n Simple_repeat Simple_repeat 2 42 0 256 258 0 0 chr5 111595605 111595667 -88034483 + GA-rich Low_complexity Low_complexity 3 64 0 2364 105 0 0 chr5 111596028 111596341 -88033809 + AluSq SINE Alu 1 313 0 470 337 124 0 chr5 111597907 111598100 -88032050 - MIR SINE MIR -14 248 32 837 258 106 61 chr5 111599364 111599809 -88030341 - MLT1C LTR MaLR -2 465 1 3185 73 13 35 chr5 111601583 111602037 -88028113 - MLT2A1 LTR ERVL 0 444 1 27 62 0 0 chr5 111602272 111602320 -88027830 + AT_rich Low_complexity Low_complexity 1 48 0 318 261 189 26 chr5 111602429 111602582 -88027568 + MIR3 SINE MIR 9 186 -22 656 281 40 32 chr5 111604194 111604443 -88025707 - MIR SINE MIR -6 256 6 22 94 0 0 chr5 111605227 111605291 -88024859 + AT_rich Low_complexity Low_complexity 1 64 0 30 45 0 0 chr5 111605753 111605797 -88024353 + AT_rich Low_complexity Low_complexity 1 44 0 215 321 62 62 chr5 111606087 111606199 -88023951 + MIR3 SINE MIR 93 204 -4 30 0 0 0 chr5 111606386 111606416 -88023734 + AT_rich Low_complexity Low_complexity 1 30 0 942 274 12 87 chr5 111608274 111608755 -88021395 + LTR67 LTR ERVL 110 554 -3 7088 178 53 4 chr5 111609003 111610180 -88019970 - L1MC1 LINE L1 -6 6327 4947 7087 48 0 3 chr5 111610180 111611278 -88018872 - L1PA5 LINE L1 -3 6151 5042 7088 178 53 4 chr5 111611278 111612156 -88017994 - L1MC1 LINE L1 -1386 4947 4114 2311 258 43 16 chr5 111612152 111612335 -88017815 - L1M4 LINE L1 -1016 5130 4953 * 243 0 0 0 chr5 111612335 111612362 -88017788 + (TG)n Simple_repeat Simple_repeat 2 28 0 2311 258 43 16 chr5 111612362 111612949 -88017201 - L1M4 LINE L1 -1193 4953 4339 29 78 0 0 chr5 111614778 111614842 -88015308 + AT_rich Low_complexity Low_complexity 1 64 0 1510 236 24 87 chr5 111617578 111618016 -88012134 - MLT1F LTR MaLR -2 540 145 1978 107 62 3 chr5 111618016 111618305 -88011845 + AluSx SINE Alu 1 306 -6 1510 236 24 87 chr5 111618305 111618441 -88011709 - MLT1F LTR MaLR -397 145 2 380 336 7 27 chr5 111618539 111618685 -88011465 + MIR SINE MIR 8 150 -112 21 36 0 0 chr5 111618739 111618767 -88011383 + AT_rich Low_complexity Low_complexity 1 28 0 1686 110 4 4 chr5 111619043 111619288 -88010862 - AluSg/x SINE Alu 0 310 66 1817 181 71 81 chr5 111619448 111619955 -88010195 - MLT1D LTR MaLR 0 505 4 345 313 84 24 chr5 111620936 111621102 -88009048 - MER5B DNA MER1_type -2 176 1 242 222 11 33 chr5 111621234 111621324 -88008826 + (TA)n Simple_repeat Simple_repeat 1 88 0 23 54 0 0 chr5 111621688 111621725 -88008425 + AT_rich Low_complexity Low_complexity 1 37 0 270 0 0 0 chr5 111621780 111621810 -88008340 + (CA)n Simple_repeat Simple_repeat 1 30 0 637 331 60 42 chr5 111621899 111622449 -88007701 - L1MC4a LINE L1 -642 5727 5345 384 316 99 39 chr5 111622607 111623334 -88006816 - L1MC4a LINE L1 -1029 5186 4416 306 383 29 0 chr5 111623557 111623732 -88006418 - L1MC4a LINE L1 -1955 4260 4081 218 281 53 0 chr5 111624038 111624095 -88006055 - MIR SINE MIR -155 107 48 27 73 0 0 chr5 111624418 111624473 -88005677 + AT_rich Low_complexity Low_complexity 1 55 0 484 332 101 5 chr5 111625559 111625776 -88004374 - MIR SINE MIR 0 262 25 288 77 0 0 chr5 111626044 111626083 -88004067 + (A)n Simple_repeat Simple_repeat 1 39 0 411 268 24 8 chr5 111626171 111626298 -88003852 - LTR67 LTR ERVL -11 546 418 763 271 54 8 chr5 111626768 111627008 -88003142 - MIR SINE MIR -10 252 2 389 273 96 81 chr5 111627393 111627466 -88002684 + LTR16A1 LTR ERVL 182 252 -205 7236 31 19 5 chr5 111627466 111628579 -88001571 + L1PA4 LINE L1 5030 6155 0 389 273 96 81 chr5 111628579 111628776 -88001374 + LTR16A1 LTR ERVL 252 456 -1 289 347 53 61 chr5 111629555 111629933 -88000217 - L2 LINE L2 -788 2526 2152 1987 191 51 14 chr5 111629938 111630352 -87999798 - Tigger2a DNA MER2_type -1 433 5 1114 179 5 18 chr5 111630353 111630571 -87999579 - Tigger2 DNA MER2_type -2503 215 1 777 304 65 49 chr5 111630734 111631103 -87999047 + MLT1H LTR MaLR 23 397 -152 21 57 0 0 chr5 111632972 111633007 -87997143 + AT_rich Low_complexity Low_complexity 1 35 0 369 287 6 19 chr5 111633308 111633465 -87996685 - L1MC4a LINE L1 -3432 2783 2629 611 324 68 11 chr5 111633488 111634121 -87996029 - L1MEc LINE L1 -3663 2552 1918 369 0 0 0 chr5 111634125 111634166 -87995984 + (TA)n Simple_repeat Simple_repeat 2 42 0 604 184 0 16 chr5 111634384 111634509 -87995641 - AluJb SINE Alu -1 311 189 500 272 132 61 chr5 111634523 111634598 -87995552 - L1MEc LINE L1 -5171 1034 966 2054 126 19 10 chr5 111634598 111634907 -87995243 - AluSx SINE Alu 0 312 1 500 272 132 61 chr5 111634907 111635158 -87994992 - L1MEc LINE L1 -5239 966 685 10225 85 6 1 chr5 111636798 111638988 -87991162 - L1PA7 LINE L1 -1 6153 3957 18293 114 2 2 chr5 111639000 111641783 -87988367 + L1PA7 LINE L1 1178 3960 -2186 897 307 107 9 chr5 111642375 111642795 -87987355 + LTR16B LTR ERVL 4 464 0 246 105 0 0 chr5 111644779 111644817 -87985333 + (TA)n Simple_repeat Simple_repeat 2 39 0 2591 43 0 0 chr5 111644817 111645118 -87985032 - AluY SINE Alu -10 301 1 555 187 0 0 chr5 111645392 111645499 -87984651 + FLAM_C SINE Alu 37 143 0 2045 131 3 6 chr5 111645573 111645886 -87984264 + AluSx SINE Alu 1 312 0 437 330 85 48 chr5 111646313 111646725 -87983425 - HAL1b LINE L1 -552 796 370 461 286 54 25 chr5 111646841 111647082 -87983068 - L1MC/D LINE L1 -2271 5537 5290 332 105 35 0 chr5 111647083 111647140 -87983010 + CT-rich Low_complexity Low_complexity 2 60 0 870 86 0 26 chr5 111647144 111647261 -87982889 - AluSq/x SINE Alu -198 114 1 249 332 32 32 chr5 111647627 111647877 -87982273 - L1MC/D LINE L1 -1548 4598 4349 30 83 0 0 chr5 111649722 111649794 -87980356 + AT_rich Low_complexity Low_complexity 1 72 0 354 264 52 32 chr5 111649917 111650072 -87980078 - MIR SINE MIR -10 252 95 191 355 0 16 chr5 111650205 111650267 -87979883 + MER5B DNA MER1_type 46 106 -72 442 299 25 19 chr5 111652832 111652989 -87977161 + MIR SINE MIR 11 168 -94 2651 137 100 2 chr5 111653980 111654439 -87975711 + MER61D LTR ERV1 1 500 -1 391 210 20 20 chr5 111655006 111655106 -87975044 - MIR3 SINE MIR -26 182 83 2210 152 17 24 chr5 111655861 111656276 -87973874 - MER61B LTR ERV1 -13 412 1 279 0 0 0 chr5 111657522 111657553 -87972597 + (TG)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr5 111658924 111658946 -87971204 + AT_rich Low_complexity Low_complexity 1 22 0 2383 60 0 0 chr5 111658955 111659238 -87970912 + AluY SINE Alu 1 283 -28 214 305 17 17 chr5 111659594 111659653 -87970497 + MIR SINE MIR 1 59 -203 225 0 0 0 chr5 111660154 111660179 -87969971 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 318 26 0 0 chr5 111662718 111662757 -87967393 + (CA)n Simple_repeat Simple_repeat 2 40 0 25 0 0 0 chr5 111663809 111663834 -87966316 + AT_rich Low_complexity Low_complexity 1 25 0 318 50 0 0 chr5 111663954 111663994 -87966156 + (TG)n Simple_repeat Simple_repeat 2 41 0 211 303 123 33 chr5 111665086 111665208 -87964942 + MIR3 SINE MIR 71 203 -5 21 36 0 0 chr5 111665679 111665707 -87964443 + AT_rich Low_complexity Low_complexity 1 28 0 2458 80 0 6 chr5 111666085 111666399 -87963751 + AluSx SINE Alu 1 312 0 392 302 130 0 chr5 111667554 111667698 -87962452 - MIR SINE MIR -36 172 37 205 156 22 22 chr5 111667785 111667830 -87962320 + (TA)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr5 111668007 111668029 -87962121 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 111668515 111668538 -87961612 + AT_rich Low_complexity Low_complexity 1 23 0 647 208 18 48 chr5 111670513 111670681 -87959469 - FRAM SINE Alu -1 165 3 252 0 0 0 chr5 111671177 111671205 -87958945 + (TA)n Simple_repeat Simple_repeat 1 28 0 2076 102 15 127 chr5 111672577 111672979 -87957171 - LTR18A LTR ERVL 0 357 1 5985 184 4 0 chr5 111672980 111673969 -87956181 - HERVL18 LTR ERVL 0 6047 5055 1158 107 107 5 chr5 111673985 111674181 -87955969 - HERVL18 LTR ERVL -3713 2334 2119 * 5693 161 21 4 chr5 111674180 111675117 -87955033 - HERVL18 LTR ERVL -4237 1810 858 2041 168 8 4 chr5 111675115 111675643 -87954507 - HERVL18 LTR ERVL -5353 694 95 * 1988 99 28 124 chr5 111675667 111676062 -87954088 - LTR18A LTR ERVL 0 357 1 2082 140 0 0 chr5 111676167 111676474 -87953676 - AluSx SINE Alu 0 312 6 192 158 0 0 chr5 111677425 111677463 -87952687 + (TG)n Simple_repeat Simple_repeat 1 38 0 224 89 89 0 chr5 111678646 111678725 -87951425 + (TA)n Simple_repeat Simple_repeat 2 87 0 21 71 0 0 chr5 111678725 111678767 -87951383 + AT_rich Low_complexity Low_complexity 1 42 0 859 271 5 23 chr5 111679251 111679472 -87950678 + MER58A DNA MER1_type 1 217 -7 675 289 129 39 chr5 111679881 111680175 -87949975 + L2 LINE L2 2697 2963 -350 2145 125 0 0 chr5 111680175 111680471 -87949679 - AluSx SINE Alu -16 296 1 675 289 129 39 chr5 111680471 111680735 -87949415 + L2 LINE L2 2963 3313 0 219 359 68 17 chr5 111680768 111680885 -87949265 - L2 LINE L2 -25 3247 3125 183 227 0 0 chr5 111681520 111681564 -87948586 + MIR SINE MIR 99 142 -66 302 269 122 39 chr5 111682015 111682171 -87947979 + L1MCc LINE L1 1123 1291 -5132 946 267 142 57 chr5 111682283 111683540 -87946610 + L1MCc LINE L1 1695 3058 -4064 402 268 102 20 chr5 111683584 111683859 -87946291 + L1MCc LINE L1 423 638 -5784 201 24 98 0 chr5 111683895 111683936 -87946214 + A-rich Low_complexity Low_complexity 1 45 0 3542 204 61 18 chr5 111683955 111684837 -87945313 + L1MC3 LINE L1 6857 7776 -9 1530 207 0 10 chr5 111684968 111685277 -87944873 + AluSx SINE Alu 1 306 -6 708 287 38 16 chr5 111685745 111686111 -87944039 + L1MCc LINE L1 3080 3453 -3488 266 260 94 0 chr5 111686389 111686485 -87943665 - L1M4 LINE L1 -1486 4660 4556 408 300 105 50 chr5 111686513 111686836 -87943314 - L1M4 LINE L1 -1644 4502 4162 2153 115 3 3 chr5 111687276 111687588 -87942562 - AluSq SINE Alu -1 312 1 261 0 0 0 chr5 111690034 111690063 -87940087 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1961 133 3 10 chr5 111690064 111690357 -87939793 + AluSx SINE Alu 2 292 -20 503 304 20 0 chr5 111690538 111690686 -87939464 + MIR SINE MIR 112 262 0 7409 33 3 0 chr5 111690926 111692326 -87937824 - L1PA4 LINE L1 0 6155 4753 2088 232 49 40 chr5 111694037 111694081 -87936069 - MLT2B3 LTR ERVL -2 552 510 234 0 0 0 chr5 111694081 111694107 -87936043 + (GA)n Simple_repeat Simple_repeat 1 26 0 2088 232 49 40 chr5 111694107 111694609 -87935541 - MLT2B3 LTR ERVL -44 510 1 226 198 81 35 chr5 111695140 111695226 -87934924 - L1MC4 LINE L1 -1339 6703 6614 258 311 0 0 chr5 111695272 111695362 -87934788 + L1MC4 LINE L1 6614 6703 -1339 329 307 0 0 chr5 111695368 111695456 -87934694 - L1MC4 LINE L1 -1339 6703 6616 322 280 0 32 chr5 111695380 111695473 -87934677 + L1MC4 LINE L1 6614 6703 -1339 * 301 171 26 53 chr5 111695466 111695542 -87934608 - L1MCa LINE L1 -4358 2068 1995 * 307 229 0 62 chr5 111695498 111695594 -87934556 + L1MC4 LINE L1 6614 6703 -1339 650 0 0 43 chr5 111696578 111696672 -87933478 + (TA)n Simple_repeat Simple_repeat 2 91 0 1903 168 7 3 chr5 111697456 111697765 -87932385 - AluJb SINE Alu 0 312 3 257 188 47 0 chr5 111698011 111698075 -87932075 + T-rich Low_complexity Low_complexity 5 71 0 43356 43 2 9 chr5 111698076 111704272 -87925878 - L1PA3 LINE L1 -5 6150 1 597 180 55 47 chr5 111706140 111706268 -87923882 + L2 LINE L2 3182 3310 -3 365 304 129 39 chr5 111706564 111706850 -87923300 - L2 LINE L2 -14 3299 2988 256 130 72 43 chr5 111706850 111706919 -87923231 - MADE1 DNA Mariner -9 71 1 523 318 115 10 chr5 111706956 111707148 -87923002 - L2 LINE L2 -405 2909 2698 221 291 0 0 chr5 111707434 111707489 -87922661 + MIR SINE MIR 117 171 -91 199 197 273 0 chr5 111707588 111707654 -87922496 + MIR SINE MIR 164 247 -15 21 57 0 0 chr5 111708653 111708688 -87921462 + AT_rich Low_complexity Low_complexity 1 35 0 317 96 39 0 chr5 111711192 111711244 -87918906 - MLT2A1 LTR ERVL 0 444 391 263 90 90 0 chr5 111711244 111711322 -87918828 + (TA)n Simple_repeat Simple_repeat 2 86 0 1414 216 24 17 chr5 111711332 111711624 -87918526 - MLT1F1 LTR MaLR -57 510 217 485 203 0 0 chr5 111711623 111711702 -87918448 - THE1B LTR MaLR -82 282 204 * 275 250 23 0 chr5 111711707 111711795 -87918355 + L1MC4 LINE L1 6614 6703 -1339 2910 71 20 15 chr5 111711827 111712220 -87917930 - MLT2A1 LTR ERVL -49 395 1 42812 74 16 6 chr5 111712220 111712375 -87917775 - HERVL-A1-A1 LTR ERVL 0 5654 5502 2054 81 0 0 chr5 111712375 111712634 -87917516 - AluY SINE Alu -13 298 40 42812 74 16 6 chr5 111712634 111718073 -87912077 - HERVL-A1-A1 LTR ERVL -152 5502 1 3299 58 45 5 chr5 111718073 111718500 -87911650 - MLT2A1 LTR ERVL 0 444 1 1675 193 0 10 chr5 111718710 111719000 -87911150 - AluJo SINE Alu -25 287 1 257 301 58 29 chr5 111719075 111719178 -87910972 + L2 LINE L2 3205 3310 -3 1384 241 27 27 chr5 111720026 111720400 -87909750 - MLT1A2 LTR MaLR 0 374 1 25 0 0 0 chr5 111721463 111721488 -87908662 + AT_rich Low_complexity Low_complexity 1 25 0 184 294 0 20 chr5 111722446 111722497 -87907653 - MER5B DNA MER1_type -128 50 1 1461 128 46 18 chr5 111723080 111723299 -87906851 + MER1B DNA MER1_type 1 225 -72 515 128 0 26 chr5 111723297 111723375 -87906775 + MER1B DNA MER1_type 262 337 -2 * 1764 173 133 50 chr5 111724196 111724694 -87905456 - LTR49 LTR ERV1 -56 539 1 2120 173 22 34 chr5 111725158 111725547 -87904603 - MLT2D LTR ERVL -3 411 26 2975 137 86 70 chr5 111725547 111726189 -87903961 + MER39B LTR ERV1 1 652 -1 2120 173 22 34 chr5 111726189 111726215 -87903935 - MLT2D LTR ERVL -388 26 1 622 298 198 17 chr5 111726872 111727332 -87902818 + L2 LINE L2 2751 3313 0 740 254 161 28 chr5 111727660 111728015 -87902135 + L1ME1 LINE L1 5724 6118 -48 1451 155 102 4 chr5 111728121 111728385 -87901765 + AluJb SINE Alu 22 311 -1 602 247 99 6 chr5 111728516 111728678 -87901472 - MIR SINE MIR -23 239 63 353 327 82 10 chr5 111728688 111728896 -87901254 + HAL1b LINE L1 248 470 -878 22 56 0 0 chr5 111728897 111728933 -87901217 + AT_rich Low_complexity Low_complexity 1 36 0 2089 106 33 0 chr5 111729434 111729736 -87900414 + AluSq SINE Alu 1 312 -1 313 0 0 0 chr5 111729740 111729780 -87900370 + L1PA3 LINE L1 6113 6152 -3 341 291 135 65 chr5 111729828 111730525 -87899625 + L1M4 LINE L1 3111 3856 -2290 1054 214 4 46 chr5 111730567 111730805 -87899345 + AluJb SINE Alu 85 312 0 1578 71 10 0 chr5 111731842 111732089 -87898061 - AluY SINE Alu 0 333 85 25 51 0 0 chr5 111732137 111732176 -87897974 + AT_rich Low_complexity Low_complexity 1 39 0 298 242 96 45 chr5 111732836 111732993 -87897157 + MER63 DNA MER1_type 672 1060 0 314 308 130 14 chr5 111733265 111733411 -87896739 + MIR SINE MIR 31 193 -69 182 196 22 22 chr5 111733612 111733658 -87896492 + L2 LINE L2 3225 3270 -2 1049 372 28 74 chr5 111733879 111734314 -87895836 - MER47B DNA MER2_type 0 418 4 1497 282 62 25 chr5 111734325 111734854 -87895296 + MLT1H1 LTR MaLR 7 555 0 23 33 0 0 chr5 111734887 111734917 -87895233 + AT_rich Low_complexity Low_complexity 1 30 0 2337 190 76 12 chr5 111735873 111736362 -87893788 + MLT2B1 LTR ERVL 1 520 0 23 33 0 0 chr5 111736562 111736592 -87893558 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 111736804 111736827 -87893323 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr5 111736994 111737028 -87893122 + AT_rich Low_complexity Low_complexity 1 34 0 230 300 39 39 chr5 111737565 111737695 -87892455 + MIR3 SINE MIR 50 179 -29 7446 41 0 0 chr5 111737695 111739337 -87890813 + L1PA5 LINE L1 4510 6153 -1 548 290 63 71 chr5 111739574 111739970 -87890180 + MLT1I LTR MaLR 9 401 -8 424 329 109 47 chr5 111740124 111740824 -87889326 + L2 LINE L2 2521 3263 -9 47 33 0 0 chr5 111741668 111741729 -87888421 + AT_rich Low_complexity Low_complexity 1 61 0 507 216 27 0 chr5 111742003 111742114 -87888036 + MER45A DNA AcHobo 51 164 -14 24 32 0 0 chr5 111742552 111742583 -87887567 + AT_rich Low_complexity Low_complexity 1 31 0 231 315 54 39 chr5 111743056 111743186 -87886964 - L2 LINE L2 -2 3311 3180 422 273 144 68 chr5 111743347 111743757 -87886393 + L1ME LINE L1 5281 5721 -400 29 47 0 0 chr5 111744348 111744391 -87885759 + AT_rich Low_complexity Low_complexity 1 43 0 267 330 119 39 chr5 111744415 111744775 -87885375 - L2 LINE L2 -321 2992 2603 365 281 132 0 chr5 111745252 111745366 -87884784 + L2 LINE L2 3185 3313 0 859 290 89 14 chr5 111746132 111746491 -87883659 - MLT1J2 LTR MaLR -24 426 41 22 56 0 0 chr5 111747366 111747402 -87882748 + AT_rich Low_complexity Low_complexity 1 36 0 684 180 0 43 chr5 111747476 111747615 -87882535 + FLAM_C SINE Alu 1 133 0 23 0 0 0 chr5 111748276 111748299 -87881851 + AT_rich Low_complexity Low_complexity 1 23 0 238 306 111 32 chr5 111748731 111749192 -87880958 + L1M4 LINE L1 3882 4378 -1768 554 225 0 0 chr5 111849805 111849916 -87780234 + AluJo/FLAM SINE Alu 3 113 -199 * 600 184 0 18 chr5 111849911 111850025 -87780125 + FLAM_A SINE Alu 21 132 -10 519 274 15 136 chr5 111850039 111850371 -87779779 - MLT1I LTR MaLR -82 327 36 207 143 20 20 chr5 111851169 111851218 -87778932 + (TTTG)n Simple_repeat Simple_repeat 1 49 0 407 186 28 34 chr5 111851893 111852070 -87778080 + GA-rich Low_complexity Low_complexity 1 176 0 432 325 107 55 chr5 111852196 111853196 -87776954 - L1 LINE L1 -2547 3599 2548 239 86 0 0 chr5 111853395 111853430 -87776720 - L1P LINE L1 -3966 2180 2146 2246 146 47 5 chr5 111853824 111854248 -87775902 + L1MA5A LINE L1 5852 6293 -4 541 351 80 18 chr5 111854278 111854631 -87775519 - HAL1b LINE L1 -946 1448 65 501 331 31 0 chr5 111856151 111856311 -87773839 + MIR SINE MIR 26 190 -72 25 31 0 0 chr5 111857872 111857904 -87772246 + AT_rich Low_complexity Low_complexity 1 32 0 593 203 169 34 chr5 111859540 111859717 -87770433 + MIR SINE MIR 62 262 0 6060 183 23 2 chr5 111860220 111861398 -87768752 - L1P LINE L1 -883 5263 4061 1436 121 4 29 chr5 111861398 111861633 -87768517 + L1PA14 LINE L1 5929 6161 0 365 343 50 22 chr5 111862291 111862472 -87767678 + MLT1J2 LTR MaLR 265 450 0 21 57 0 0 chr5 111862496 111862531 -87767619 + AT_rich Low_complexity Low_complexity 1 35 0 248 302 0 0 chr5 111863475 111863538 -87766612 + L2 LINE L2 3251 3313 0 3555 127 53 27 chr5 111864187 111864823 -87765327 + MER39B LTR ERV1 1 653 0 394 282 112 6 chr5 111865232 111865402 -87764748 + MER5A DNA MER1_type 1 188 -1 6281 156 55 3 chr5 111865968 111867436 -87762714 + L1MC1 LINE L1 4776 6328 -5 348 258 192 0 chr5 111869656 111869807 -87760343 + MIR SINE MIR 13 192 -70 363 352 171 3 chr5 111871093 111871403 -87758747 + L2 LINE L2 1933 2294 -1020 28 95 0 0 chr5 111871513 111871597 -87758553 + AT_rich Low_complexity Low_complexity 1 84 0 212 338 14 0 chr5 111871858 111871929 -87758221 + L2 LINE L2 3242 3313 0 2027 144 0 13 chr5 111872007 111872319 -87757831 + AluSx SINE Alu 1 308 -4 1268 287 52 36 chr5 111872931 111873740 -87756410 - L2 LINE L2 -1 3312 2479 260 385 76 21 chr5 111873796 111874087 -87756063 + L2 LINE L2 2438 2744 -570 2769 98 0 3 chr5 111874373 111874749 -87755401 + THE1C LTR MaLR 1 375 0 9786 125 40 16 chr5 111874749 111876292 -87753858 + THE1C-int LTR MaLR 1 1580 0 2564 103 24 8 chr5 111876292 111876661 -87753489 + THE1C LTR MaLR 1 375 0 238 343 163 0 chr5 111877155 111877394 -87752756 + L2 LINE L2 2221 2498 -816 620 235 30 63 chr5 111877784 111877942 -87752208 - MLT1J2 LTR MaLR -254 155 1 2131 168 18 63 chr5 111878150 111878596 -87751554 - MSTB LTR MaLR 0 426 1 1914 286 72 34 chr5 111879754 111880489 -87749661 - L2 LINE L2 -596 2718 1956 410 324 86 16 chr5 111880606 111880850 -87749300 - MIR SINE MIR 0 262 2 481 313 27 7 chr5 111881379 111881529 -87748621 + MIR SINE MIR 106 258 -4 2957 159 25 5 chr5 111883314 111883869 -87746281 + L1MB3 LINE L1 5610 6175 -8 234 128 0 0 chr5 111885028 111885067 -87745083 + (CA)n Simple_repeat Simple_repeat 2 40 0 271 241 0 0 chr5 111885994 111886048 -87744102 - LTR33 LTR ERVL 0 521 468 753 200 75 6 chr5 111886086 111886246 -87743904 - MIR SINE MIR -31 231 61 22 35 0 0 chr5 111888775 111888804 -87741346 + AT_rich Low_complexity Low_complexity 1 29 0 239 182 0 18 chr5 111890665 111890720 -87739430 - L1ME4a LINE L1 -90 6031 5978 510 296 157 53 chr5 111890780 111891350 -87738800 - L1ME4a LINE L1 -239 5882 5256 26474 143 9 14 chr5 111891784 111892998 -87737152 + L1PA8A LINE L1 8 1227 -5219 192 97 0 0 chr5 111892998 111893029 -87737121 + (CAA)n Simple_repeat Simple_repeat 3 33 0 26474 143 9 14 chr5 111893029 111897745 -87732405 + L1PA8A LINE L1 1227 5969 -477 289 282 124 30 chr5 111897845 111898079 -87732071 + L1MB3 LINE L1 5561 5816 -346 22 70 0 0 chr5 111898386 111898429 -87731721 + AT_rich Low_complexity Low_complexity 1 43 0 294 206 0 0 chr5 111899867 111899935 -87730215 + (CA)n Simple_repeat Simple_repeat 2 69 0 21 0 0 0 chr5 111900067 111900088 -87730062 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr5 111901035 111901067 -87729083 + AT_rich Low_complexity Low_complexity 1 32 0 1385 113 9 0 chr5 111901371 111901593 -87728557 + L1MA5A LINE L1 6074 6297 0 21 0 0 0 chr5 111901762 111901783 -87728367 + AT_rich Low_complexity Low_complexity 1 21 0 240 239 45 0 chr5 111902125 111902213 -87727937 + HAL1 LINE L1 1373 1464 -1043 203 0 37 0 chr5 111902782 111902809 -87727341 + (TTA)n Simple_repeat Simple_repeat 3 30 0 2468 64 0 0 chr5 111902809 111903121 -87727029 - L1PA5 LINE L1 -18 6136 5825 839 163 56 6 chr5 111903367 111903545 -87726605 + L1MB3 LINE L1 5992 6178 -5 23 86 0 0 chr5 111903550 111903608 -87726542 + AT_rich Low_complexity Low_complexity 1 58 0 343 335 38 65 chr5 111904123 111904386 -87725764 - L3b LINE CR1 -220 1363 1108 5385 166 19 6 chr5 111904878 111905980 -87724170 + L1MA5 LINE L1 5183 6300 0 206 195 49 0 chr5 111906013 111906054 -87724096 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 2044 168 24 35 chr5 111909771 111910194 -87719956 + MSTB1 LTR MaLR 15 432 0 583 250 47 17 chr5 111911347 111911519 -87718631 + MER5A DNA MER1_type 10 186 -3 25 31 0 0 chr5 111911703 111911735 -87718415 + AT_rich Low_complexity Low_complexity 1 32 0 615 318 67 0 chr5 111911854 111912077 -87718073 - MIR SINE MIR -21 241 4 335 350 0 21 chr5 111912240 111912337 -87717813 - L2 LINE L2 -22 3250 3156 488 250 158 24 chr5 111912597 111912761 -87717389 + MIR SINE MIR 45 230 -32 3230 68 59 20 chr5 111913034 111913453 -87716697 + L1PA8A LINE L1 5659 6099 -32 2099 110 0 3 chr5 111913453 111913778 -87716372 - AluY SINE Alu 0 311 1 3230 68 59 20 chr5 111913778 111913813 -87716337 + L1PA8A LINE L1 6099 6131 0 556 321 12 45 chr5 111914091 111914206 -87715944 + L1MC4a LINE L1 5562 5679 -2129 1972 117 0 60 chr5 111914206 111914522 -87715628 + AluSx SINE Alu 1 297 -15 556 321 12 45 chr5 111914522 111914742 -87715408 + L1MC4a LINE L1 5679 5886 -1922 529 255 13 169 chr5 111914938 111915416 -87714734 + L2 LINE L2 2094 2496 -818 2499 54 0 10 chr5 111916096 111916410 -87713740 + AluY SINE Alu 1 311 0 22 35 0 0 chr5 111918069 111918098 -87712052 + AT_rich Low_complexity Low_complexity 1 29 0 733 205 58 80 chr5 111919611 111919835 -87710315 + MER20 DNA MER1_type 1 219 0 252 250 31 0 chr5 111919971 111920035 -87710115 - MIR3 SINE MIR -10 198 133 3194 147 0 10 chr5 111920318 111920820 -87709330 - LOR1a LTR ERV1 0 497 1 336 289 7 30 chr5 111921245 111921380 -87708770 + (TATATG)n Simple_repeat Simple_repeat 5 136 0 2138 130 48 20 chr5 111921398 111921752 -87708398 - THE1B LTR MaLR 0 364 1 762 308 61 42 chr5 111921796 111922222 -87707928 + LTR16A LTR ERVL 17 450 0 565 267 29 29 chr5 111922264 111922436 -87707714 + MIR SINE MIR 91 262 0 21 71 0 0 chr5 111923257 111923299 -87706851 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr5 111923313 111923335 -87706815 + AT_rich Low_complexity Low_complexity 1 22 0 747 0 0 0 chr5 111923387 111923470 -87706680 + (TAAAA)n Simple_repeat Simple_repeat 3 85 0 249 231 146 39 chr5 111923478 111923608 -87706542 + L1M4b LINE L1 82 225 -6634 998 263 11 14 chr5 111923613 111923963 -87706187 + L1M4b LINE L1 1674 2022 -4833 846 276 8 8 chr5 111923965 111924226 -87705924 + L1M4b LINE L1 2946 3206 -3751 * 1331 225 33 0 chr5 111924221 111924528 -87705622 + L1MA4 LINE L1 5982 6298 -2 1026 231 58 22 chr5 111924535 111924898 -87705252 + L1M4b LINE L1 3196 3571 -3386 24 0 0 0 chr5 111925255 111925279 -87704871 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr5 111925439 111925480 -87704670 + AT_rich Low_complexity Low_complexity 1 41 0 2398 80 0 0 chr5 111925813 111926113 -87704037 + AluY SINE Alu 1 300 -11 1465 207 37 14 chr5 111926885 111927238 -87702912 + MLT1A1 LTR MaLR 5 365 0 1530 174 85 15 chr5 111928140 111928497 -87701653 - MSTA LTR MaLR 0 375 1 621 140 9 9 chr5 111928636 111928743 -87701407 + LTR40b LTR ERVL 356 462 0 2016 128 54 26 chr5 111928812 111929164 -87700986 - THE1B LTR MaLR -2 362 1 494 326 64 0 chr5 111929283 111929455 -87700695 + MIR SINE MIR 36 218 -44 1399 272 95 77 chr5 111929477 111929956 -87700194 - L2 LINE L2 -10 3303 2834 2287 113 3 0 chr5 111929956 111930266 -87699884 + AluSq SINE Alu 3 313 0 1399 272 95 77 chr5 111930266 111930827 -87699323 - L2 LINE L2 -479 2834 2264 470 360 22 39 chr5 111933411 111933769 -87696381 + L1MEc LINE L1 187 538 -6025 403 281 17 13 chr5 111934197 111934393 -87695757 + L1MEc LINE L1 816 1136 -5236 753 281 60 45 chr5 111934487 111935068 -87695082 + L1MEc LINE L1 1030 1566 -4818 * 3418 264 83 28 chr5 111935057 111936983 -87693167 + L1MEc LINE L1 1952 3924 -2458 1637 269 48 18 chr5 111937019 111937521 -87692629 + L1ME2 LINE L1 9 525 -5520 * 1921 231 70 46 chr5 111937518 111938347 -87691803 + L1ME2 LINE L1 1140 2183 -4562 1894 225 68 37 chr5 111938347 111938968 -87691182 + L1ME2 LINE L1 5873 6512 -70 2403 71 0 3 chr5 111940882 111941192 -87688958 - AluY SINE Alu -2 309 1 208 406 108 13 chr5 111941262 111941641 -87688509 - L2 LINE L2 -51 3221 2807 258 32 0 0 chr5 111942286 111942317 -87687833 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 261 57 0 0 chr5 111942449 111942484 -87687666 + (T)n Simple_repeat Simple_repeat 1 35 0 47 44 0 0 chr5 111945332 111945400 -87684750 + AT_rich Low_complexity Low_complexity 1 68 0 371 266 177 0 chr5 111945675 111945833 -87684317 - L2 LINE L2 0 3313 3128 726 299 79 9 chr5 111946161 111946479 -87683671 + MER102b DNA MER1_type 2 341 0 3355 238 43 17 chr5 111948175 111949294 -87680856 - MER69B DNA AcHobo 0 1226 68 322 220 46 55 chr5 111949637 111949746 -87680404 - L2 LINE L2 -14 3299 3192 22 0 0 0 chr5 111951373 111951395 -87678755 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 111951832 111951854 -87678296 + AT_rich Low_complexity Low_complexity 1 22 0 31 58 0 0 chr5 111953138 111953190 -87676960 + AT_rich Low_complexity Low_complexity 1 52 0 2212 110 7 0 chr5 111953372 111953718 -87676432 - AluSq SINE Alu 0 348 1 331 261 25 0 chr5 111953842 111953961 -87676189 + L1MEc LINE L1 3951 4072 -2310 274 57 0 0 chr5 111954026 111954061 -87676089 - U2 snRNA snRNA -153 35 1 853 296 88 20 chr5 111954062 111955053 -87675097 + L1MEc LINE L1 4122 5179 -1203 3701 188 69 14 chr5 111955259 111956465 -87673685 + L1MB7 LINE L1 4847 6124 -60 222 91 0 0 chr5 111956930 111956963 -87673187 + (TG)n Simple_repeat Simple_repeat 2 34 0 265 289 0 12 chr5 111956975 111957058 -87673092 + (TA)n Simple_repeat Simple_repeat 2 83 0 245 268 41 0 chr5 111957197 111957294 -87672856 - L1PB4 LINE L1 -14 6142 6042 381 274 52 104 chr5 111961152 111961440 -87668710 - Charlie8 DNA MER1_type -2143 274 2 21 0 0 0 chr5 111961780 111961801 -87668349 + AT_rich Low_complexity Low_complexity 1 21 0 324 0 0 0 chr5 111962307 111962343 -87667807 + (A)n Simple_repeat Simple_repeat 1 36 0 327 25 0 0 chr5 111962932 111962972 -87667178 + (TG)n Simple_repeat Simple_repeat 2 41 0 2114 121 0 7 chr5 111963996 111964303 -87665847 - AluSg SINE Alu -5 305 1 580 261 140 27 chr5 111964690 111964912 -87665238 - MIR SINE MIR -3 259 13 200 235 15 88 chr5 111964996 111965064 -87665086 + MIR3 SINE MIR 110 172 -36 750 233 94 67 chr5 111965253 111965584 -87664566 + MER102b DNA MER1_type 1 340 -1 1525 213 0 30 chr5 111965618 111965923 -87664227 + AluJo SINE Alu 1 296 -16 273 29 0 0 chr5 111966050 111966084 -87664066 + (CA)n Simple_repeat Simple_repeat 1 34 0 1655 142 8 16 chr5 111967364 111967617 -87662533 + AluSx SINE Alu 1 251 -61 1439 123 80 52 chr5 111967774 111968123 -87662027 - THE1C LTR MaLR 0 375 17 8691 121 18 59 chr5 111968153 111969792 -87660358 - THE1C-int LTR MaLR -7 1573 1 1786 168 47 14 chr5 111969792 111970155 -87659995 - THE1C LTR MaLR 0 375 1 210 299 46 63 chr5 111970182 111970356 -87659794 + L2 LINE L2 2404 2574 -740 820 312 6 58 chr5 111970471 111970782 -87659368 + L2 LINE L2 2978 3272 0 1964 112 46 7 chr5 111970957 111971242 -87658908 + AluSx SINE Alu 14 309 -3 26 30 0 0 chr5 111971692 111971725 -87658425 + AT_rich Low_complexity Low_complexity 1 33 0 381 296 33 26 chr5 111973344 111973496 -87656654 - MIR SINE MIR -31 231 79 216 0 0 0 chr5 111973550 111973574 -87656576 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 432 0 0 0 chr5 111973573 111973621 -87656529 + (CA)n Simple_repeat Simple_repeat 1 48 0 253 372 61 27 chr5 111974062 111974355 -87655795 + L2 LINE L2 2226 2528 -786 188 366 78 26 chr5 111974495 111974686 -87655464 + L2 LINE L2 2777 2977 -337 635 354 97 38 chr5 111974835 111975488 -87654662 - L2 LINE L2 -350 2964 2274 325 282 12 47 chr5 111976651 111976736 -87653414 - MIR SINE MIR -147 115 34 320 294 132 0 chr5 111977363 111977499 -87652651 + MIR SINE MIR 15 168 -94 943 257 94 27 chr5 111977920 111978325 -87651825 - MLT1C LTR MaLR -2 465 34 27 0 0 0 chr5 111978692 111978719 -87651431 + AT_rich Low_complexity Low_complexity 1 27 0 29 47 0 0 chr5 111979996 111980039 -87650111 + AT_rich Low_complexity Low_complexity 1 43 0 304 354 90 28 chr5 111980100 111980278 -87649872 - MER5A DNA MER1_type 0 189 1 259 271 29 0 chr5 111981119 111981189 -87648961 + L2 LINE L2 3237 3308 -5 2300 129 23 18 chr5 111982758 111983146 -87647004 + MLT1B LTR MaLR 1 390 0 528 264 88 120 chr5 111983526 111983901 -87646249 + L1MEd LINE L1 846 1291 -1199 1985 177 10 28 chr5 111984600 111984996 -87645154 - MLT1B LTR MaLR -1 389 1 22 35 0 0 chr5 111985581 111985610 -87644540 + AT_rich Low_complexity Low_complexity 1 29 0 656 281 89 6 chr5 111985929 111986242 -87643908 - LTR33 LTR ERVL -141 380 42 21 0 0 0 chr5 111986907 111986928 -87643222 + AT_rich Low_complexity Low_complexity 1 21 0 213 231 0 0 chr5 111987167 111987206 -87642944 - L2 LINE L2 -16 3297 3259 5581 122 17 4 chr5 111987206 111988188 -87641962 - L1PA15 LINE L1 -3 6162 5171 686 247 6 11 chr5 111988207 111988385 -87641765 + MER5B DNA MER1_type 2 178 0 442 259 184 7 chr5 111988404 111988551 -87641599 + MER5A DNA MER1_type 13 185 -4 180 250 0 58 chr5 111988631 111988683 -87641467 - MIR SINE MIR -200 62 14 27 29 0 0 chr5 111988900 111988934 -87641216 + AT_rich Low_complexity Low_complexity 1 34 0 2093 151 0 0 chr5 111988957 111989262 -87640888 + AluSx SINE Alu 1 305 -7 192 152 0 0 chr5 111990039 111990072 -87640078 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 1693 183 3 13 chr5 111990306 111990606 -87639544 + AluJb SINE Alu 15 311 -1 1983 150 3 0 chr5 111992018 111992298 -87637852 + AluSq SINE Alu 1 279 -34 396 0 0 0 chr5 111992298 111992342 -87637808 + (CA)n Simple_repeat Simple_repeat 1 44 0 243 0 0 0 chr5 111992341 111992368 -87637782 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 1983 150 3 0 chr5 111992342 111992381 -87637769 + AluSq SINE Alu 279 295 -18 382 314 13 31 chr5 111992387 111992546 -87637604 + MIR3 SINE MIR 37 192 -16 21 71 0 0 chr5 111992866 111992908 -87637242 + AT_rich Low_complexity Low_complexity 1 42 0 322 252 48 87 chr5 111994279 111994485 -87635665 - MIR SINE MIR -45 217 20 2226 110 0 0 chr5 111994808 111995108 -87635042 - AluSx SINE Alu -12 300 1 298 172 35 0 chr5 111995448 111995506 -87634644 + L2 LINE L2 3252 3311 -2 311 339 37 58 chr5 111995593 111995782 -87634368 + MIR3 SINE MIR 23 207 -1 228 100 0 0 chr5 111997145 111997185 -87632965 + (TTCTC)n Simple_repeat Simple_repeat 4 43 0 403 306 114 85 chr5 111997189 111997831 -87632319 + L2 LINE L2 2596 3270 -2 253 337 51 16 chr5 111997847 111997986 -87632164 - MIR3 SINE MIR -69 139 9 351 284 158 36 chr5 111999274 111999496 -87630654 + MIR SINE MIR 2 250 -12 1528 68 0 143 chr5 112000148 112000414 -87629736 + MER30 DNA MER1_type 3 230 0 181 233 23 0 chr5 112000656 112000699 -87629451 - L2 LINE L2 -4 3309 3266 2469 125 25 22 chr5 112001040 112001441 -87628709 + L1PA16 LINE L1 5756 6157 -9 2323 69 0 0 chr5 112001474 112001762 -87628388 - AluY SINE Alu -23 288 1 21 0 0 0 chr5 112002435 112002456 -87627694 + AT_rich Low_complexity Low_complexity 1 21 0 300 283 92 40 chr5 112002581 112002733 -87627417 - MIR SINE MIR -45 217 58 243 333 118 0 chr5 112006008 112006143 -87624007 + L2 LINE L2 1483 1633 -1681 768 153 91 20 chr5 112006143 112006329 -87623821 + MLT1A1 LTR MaLR 207 365 0 465 301 205 24 chr5 112006329 112006705 -87623445 + L2 LINE L2 1719 2162 -1152 380 316 162 15 chr5 112006798 112007070 -87623080 - L2 LINE L2 -1219 2095 1784 1395 127 51 133 chr5 112007888 112008220 -87621930 + AluJo SINE Alu 5 309 -3 396 244 33 0 chr5 112011451 112011541 -87618609 + Tigger7 DNA MER2_type 1 93 -612 * 1495 189 105 0 chr5 112011534 112011877 -87618273 + Tigger7 DNA MER2_type 2088 2466 -21 220 159 45 0 chr5 112013127 112013171 -87616979 + GA-rich Low_complexity Low_complexity 1 46 0 447 326 73 65 chr5 112013256 112013299 -87616851 - L2 LINE L2 -252 3020 2979 2134 157 113 55 chr5 112013299 112013776 -87616374 - MLT1D LTR MaLR 0 505 1 447 326 73 65 chr5 112013776 112014325 -87615825 - L2 LINE L2 -293 2979 2415 243 0 0 0 chr5 112014566 112014593 -87615557 + (TG)n Simple_repeat Simple_repeat 2 28 0 801 267 30 46 chr5 112014704 112015007 -87615143 + LTR16A LTR ERVL 57 354 -96 431 320 67 43 chr5 112015195 112015657 -87614493 + HERV16 LTR ERVL 3484 3956 -1040 419 303 9 0 chr5 112015763 112015872 -87614278 - ERVL LTR ERVL -1393 4371 4262 908 290 84 19 chr5 112016323 112016699 -87613451 + LTR16A LTR ERVL 34 441 -9 373 301 74 35 chr5 112016775 112017004 -87613146 + L2 LINE L2 2295 2532 -782 891 297 87 72 chr5 112017653 112018304 -87611846 + L2 LINE L2 2295 2988 -325 1514 185 23 23 chr5 112018304 112018612 -87611538 - AluJo SINE Alu -4 308 1 891 297 87 72 chr5 112018612 112018939 -87611211 + L2 LINE L2 2988 3309 -4 268 181 42 54 chr5 112018939 112019105 -87611045 + (TATAA)n Simple_repeat Simple_repeat 5 168 0 4223 167 81 21 chr5 112019120 112019995 -87610155 + L1MA9 LINE L1 5384 6311 -1 28 48 0 0 chr5 112020607 112020649 -87609501 + AT_rich Low_complexity Low_complexity 1 42 0 368 310 32 7 chr5 112021322 112021477 -87608673 - L2 LINE L2 -5 3308 3150 320 308 21 35 chr5 112021456 112021599 -87608551 - MIR SINE MIR -3 259 119 * 448 314 124 56 chr5 112021669 112022146 -87608004 - L2 LINE L2 -52 3261 2736 22 0 0 0 chr5 112023961 112023983 -87606167 + AT_rich Low_complexity Low_complexity 1 22 0 323 257 139 39 chr5 112024708 112025047 -87605103 + MLT1K LTR MaLR 168 588 0 243 0 0 0 chr5 112025567 112025594 -87604556 + (TG)n Simple_repeat Simple_repeat 2 28 0 911 228 79 37 chr5 112025739 112025980 -87604170 - MIR SINE MIR -11 251 1 182 348 56 22 chr5 112026097 112026186 -87603964 - MIR SINE MIR -108 154 63 27 0 0 0 chr5 112026363 112026390 -87603760 + AT_rich Low_complexity Low_complexity 1 27 0 1335 187 55 139 chr5 112026729 112027058 -87603092 + MLT1C LTR MaLR 1 356 -111 1694 153 7 61 chr5 112027058 112027353 -87602797 + AluJo SINE Alu 2 280 -32 925 93 35 12 chr5 112027353 112027525 -87602625 + GA-rich Low_complexity Low_complexity 4 179 0 1335 187 55 139 chr5 112027525 112027703 -87602447 + MLT1C LTR MaLR 354 466 -1 47 53 0 0 chr5 112027765 112027840 -87602310 + AT_rich Low_complexity Low_complexity 1 75 0 1913 122 44 0 chr5 112028085 112028379 -87601771 - AluSx SINE Alu 0 312 5 24 0 0 0 chr5 112030353 112030377 -87599773 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr5 112030523 112030559 -87599591 + AT_rich Low_complexity Low_complexity 1 36 0 31 0 0 0 chr5 112032048 112032079 -87598071 + AT_rich Low_complexity Low_complexity 1 31 0 774 278 146 21 chr5 112034143 112034528 -87595622 - MLT1J2 LTR MaLR -11 439 7 817 312 58 19 chr5 112035056 112035367 -87594783 - LTR16C LTR ERVL 0 491 169 357 238 193 26 chr5 112036432 112036583 -87593567 - MLT1J2 LTR MaLR -238 212 34 1100 219 46 17 chr5 112038063 112038300 -87591850 - MIR SINE MIR 0 262 19 250 220 11 11 chr5 112038874 112038965 -87591185 + (TA)n Simple_repeat Simple_repeat 1 91 0 1816 206 55 20 chr5 112039985 112040436 -87589714 - MLT1C LTR MaLR 0 467 1 402 277 42 8 chr5 112041550 112041669 -87588481 - L2 LINE L2 -11 3302 3180 2271 60 0 0 chr5 112041822 112042106 -87588044 - L1PA7 LINE L1 -7 6147 5864 2766 70 11 3 chr5 112042106 112042476 -87587674 + L1PA7 LINE L1 5522 5894 -260 21 71 0 0 chr5 112042569 112042611 -87587539 + AT_rich Low_complexity Low_complexity 1 42 0 22 70 0 0 chr5 112042807 112042850 -87587300 + AT_rich Low_complexity Low_complexity 1 43 0 237 274 43 60 chr5 112043901 112044018 -87586132 + L2 LINE L2 2777 2891 -423 270 270 111 16 chr5 112044280 112044406 -87585744 - MLT1K LTR MaLR -8 580 443 322 393 7 14 chr5 112044537 112044682 -87585468 - MLT1K LTR MaLR -368 220 77 463 296 196 14 chr5 112045457 112045677 -87584473 + MIR SINE MIR 3 262 0 200 188 0 0 chr5 112045688 112045720 -87584430 + polypyrimidine Low_complexity Low_complexity 2 33 0 241 313 38 38 chr5 112046775 112046906 -87583244 - L2 LINE L2 -6 3307 3177 25 0 0 0 chr5 112048893 112048918 -87581232 + AT_rich Low_complexity Low_complexity 1 25 0 495 278 90 26 chr5 112051921 112052187 -87577963 - MLT1K LTR MaLR -3 585 303 1147 189 44 30 chr5 112052205 112052501 -87577649 + L1MA7 LINE L1 5989 6288 -3 506 309 44 50 chr5 112052512 112052810 -87577340 - MLT1K LTR MaLR -290 298 3 2189 231 42 46 chr5 112053130 112053394 -87576756 - L1M4c LINE L1 -4796 2163 1899 2100 115 26 29 chr5 112053394 112053707 -87576443 - AluSx SINE Alu 0 312 1 2189 231 42 46 chr5 112053707 112054417 -87575733 - L1M4c LINE L1 -5060 1899 1190 5408 153 27 44 chr5 112054918 112056008 -87574142 - MER11C LTR ERVK 0 1071 1 2223 245 95 62 chr5 112056066 112056963 -87573187 - L1M4c LINE L1 -5923 936 11 1073 258 76 49 chr5 112057026 112057394 -87572756 - L3b LINE CR1 -29 1554 1177 6140 142 25 5 chr5 112057405 112058098 -87572052 - L1MA3 LINE L1 -1 7723 7045 405 0 0 0 chr5 112058098 112058143 -87572007 + (TG)n Simple_repeat Simple_repeat 2 46 0 6140 142 25 5 chr5 112058143 112059357 -87570793 - L1MA3 LINE L1 -679 7045 5774 * 13834 152 43 2 chr5 112059350 112061083 -87569067 - L1MA3 LINE L1 -5063 2502 644 321 26 0 0 chr5 112061083 112061121 -87569029 + (TCTCC)n Simple_repeat Simple_repeat 4 41 0 13834 152 43 2 chr5 112061121 112061780 -87568370 - L1MA3 LINE L1 -6921 644 13 341 354 34 11 chr5 112061872 112062047 -87568103 + MER5A DNA MER1_type 7 185 -4 725 204 19 12 chr5 112062093 112062255 -87567895 + MER5B DNA MER1_type 13 175 -3 2143 111 0 44 chr5 112063033 112063349 -87566801 - AluSg SINE Alu -8 302 1 229 300 0 0 chr5 112063592 112063652 -87566498 + L2 LINE L2 3203 3262 -10 379 155 103 19 chr5 112064095 112064250 -87565900 + (TTATA)n Simple_repeat Simple_repeat 3 170 0 249 129 65 0 chr5 112064254 112064347 -87565803 + (TA)n Simple_repeat Simple_repeat 2 100 0 815 254 92 45 chr5 112064704 112065193 -87564957 - MER113 DNA MER1_type? -3 518 7 451 325 175 0 chr5 112066556 112066722 -87563428 - MER91A DNA MER1_type -1 195 1 399 294 97 66 chr5 112069139 112069489 -87560661 - MLT1J LTR MaLR -1 510 150 2203 101 0 26 chr5 112069535 112069843 -87560307 - AluSx SINE Alu -12 300 1 227 365 32 16 chr5 112070868 112070994 -87559156 + MIR SINE MIR 15 142 -120 24 0 0 0 chr5 112071247 112071271 -87558879 + AT_rich Low_complexity Low_complexity 1 24 0 1906 155 17 0 chr5 112071301 112071598 -87558552 + AluSx SINE Alu 1 302 -10 761 272 88 52 chr5 112071995 112072459 -87557691 + MARNA DNA Mariner 15 495 -91 290 308 8 26 chr5 112072356 112072473 -87557677 - MARNA DNA Mariner -396 190 76 * 315 348 149 20 chr5 112072796 112072997 -87557153 - MIR SINE MIR -15 247 21 363 44 0 0 chr5 112073158 112073203 -87556947 + (T)n Simple_repeat Simple_repeat 1 45 0 499 250 24 8 chr5 112075480 112075604 -87554546 + L2 LINE L2 3188 3313 0 22 0 0 0 chr5 112076597 112076619 -87553531 + AT_rich Low_complexity Low_complexity 1 22 0 258 333 0 85 chr5 112078545 112078686 -87551464 + L2 LINE L2 3142 3270 -2 21 0 0 0 chr5 112080379 112080400 -87549750 + AT_rich Low_complexity Low_complexity 1 21 0 183 273 18 18 chr5 112080443 112080498 -87549652 - MIR3 SINE MIR -144 64 10 2160 103 7 3 chr5 112080973 112081264 -87548886 + AluSx SINE Alu 1 292 -20 200 205 0 0 chr5 112084532 112084571 -87545579 + (ATG)n Simple_repeat Simple_repeat 1 39 0 410 212 24 0 chr5 112084964 112085049 -87545101 - MIR3 SINE MIR -49 159 73 351 0 0 0 chr5 112089000 112089039 -87541111 + (A)n Simple_repeat Simple_repeat 1 39 0 22 56 0 0 chr5 112090974 112091010 -87539140 + AT_rich Low_complexity Low_complexity 1 36 0 1567 203 14 0 chr5 112091010 112091296 -87538854 - AluJo SINE Alu -22 290 1 1584 223 3 0 chr5 112093240 112093532 -87536618 - AluJo SINE Alu -14 298 6 256 316 40 0 chr5 112094208 112094284 -87535866 + MIR SINE MIR 30 108 -100 225 0 0 0 chr5 112094772 112094797 -87535353 + (A)n Simple_repeat Simple_repeat 1 25 0 22 0 0 0 chr5 112095334 112095356 -87534794 + AT_rich Low_complexity Low_complexity 1 22 0 199 77 26 26 chr5 112096000 112096039 -87534111 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr5 112097488 112097511 -87532639 + AT_rich Low_complexity Low_complexity 1 23 0 268 183 37 12 chr5 112099289 112099371 -87530779 + (TA)n Simple_repeat Simple_repeat 1 84 0 237 337 21 42 chr5 112099488 112099502 -87530648 - L2 LINE L2 -15 3257 3244 1975 161 3 0 chr5 112099502 112099806 -87530344 + AluSx SINE Alu 1 305 -7 237 337 21 42 chr5 112099806 112099886 -87530264 - L2 LINE L2 -28 3244 3165 1098 207 158 73 chr5 112100785 112101292 -87528858 + MLT1E LTR MaLR 1 544 -23 2338 108 0 13 chr5 112103660 112103976 -87526174 - AluSx SINE Alu 0 312 1 184 307 0 27 chr5 112104887 112104962 -87525188 + MIR SINE MIR 60 133 -75 885 142 14 0 chr5 112105763 112105904 -87524246 + FRAM SINE Alu 20 162 -14 2189 113 0 0 chr5 112105906 112106197 -87523953 + AluSg1 SINE Alu 1 291 -18 599 154 0 0 chr5 112106667 112106771 -87523379 - AluJb SINE Alu -7 305 202 186 364 35 77 chr5 112107030 112107173 -87522977 + L2 LINE L2 3128 3264 -8 1752 173 10 35 chr5 112107203 112107516 -87522634 + AluJb SINE Alu 1 305 -7 949 89 0 8 chr5 112107809 112107933 -87522217 + AluSq/x SINE Alu 1 123 -189 665 153 40 0 chr5 112107946 112108096 -87522054 + GA-rich Low_complexity Low_complexity 4 159 0 25 0 0 0 chr5 112108695 112108720 -87521430 + AT_rich Low_complexity Low_complexity 1 25 0 576 289 120 18 chr5 112109048 112109332 -87520818 + L2 LINE L2 3001 3313 0 597 287 79 14 chr5 112113139 112113355 -87516795 - MIR SINE MIR -1 261 32 574 203 8 8 chr5 112114326 112114444 -87515706 + L2 LINE L2 2680 2797 -517 615 221 21 13 chr5 112114498 112115033 -87515117 + (TA)n Simple_repeat Simple_repeat 1 539 0 424 81 0 40 chr5 112115064 112115138 -87515012 + MADE1 DNA Mariner 10 80 0 800 245 41 139 chr5 112115163 112115629 -87514521 + L2 LINE L2 2851 3270 -43 284 261 0 91 chr5 112116221 112116309 -87513841 - MIR3 SINE MIR -42 166 87 225 0 0 0 chr5 112117010 112117035 -87513115 + (CACCAT)n Simple_repeat Simple_repeat 3 27 0 2171 63 4 11 chr5 112118841 112119110 -87511040 - AluY SINE Alu -6 305 39 337 259 9 18 chr5 112119383 112119495 -87510655 - MER103 DNA DNA -1 165 55 292 257 88 26 chr5 112119584 112119697 -87510453 - MIR3 SINE MIR -48 160 41 418 169 0 0 chr5 112120461 112120538 -87509612 - AluJo SINE Alu -11 301 225 636 221 107 7 chr5 112120542 112120691 -87509459 - AluJo SINE Alu -148 164 1 234 345 95 0 chr5 112121898 112122014 -87508136 - MIR SINE MIR -63 145 19 246 317 96 36 chr5 112122893 112123060 -87507090 + MER5A DNA MER1_type 6 182 -7 214 275 43 43 chr5 112123233 112123302 -87506848 + L2 LINE L2 3141 3209 -63 599 339 63 17 chr5 112123813 112124052 -87506098 + MIR SINE MIR 11 260 -2 859 237 72 1 chr5 112125172 112125401 -87504749 + MIR SINE MIR 8 252 -10 596 217 14 29 chr5 112129205 112129343 -87500807 - MIR SINE MIR -109 153 18 309 51 0 0 chr5 112129343 112129382 -87500768 + (A)n Simple_repeat Simple_repeat 1 39 0 2317 101 3 0 chr5 112130604 112130910 -87499240 - AluSp SINE Alu -6 307 1 432 242 33 8 chr5 112130943 112131063 -87499087 + MIR SINE MIR 59 181 -81 592 254 78 53 chr5 112131109 112131612 -87498538 - L2 LINE L2 -18 3295 2728 423 344 43 6 chr5 112131883 112132046 -87498104 - MIR3 SINE MIR -2 206 38 698 224 0 0 chr5 112132245 112132361 -87497789 - FLAM_A SINE Alu -17 116 1 2232 98 0 35 chr5 112133019 112133336 -87496814 - AluSg SINE Alu -4 306 1 239 309 140 15 chr5 112134903 112135039 -87495111 + L2 LINE L2 3119 3271 -1 481 217 172 6 chr5 112135159 112135314 -87494836 + MER5A DNA MER1_type 4 188 -1 23 0 0 0 chr5 112136580 112136603 -87493547 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 112136669 112136713 -87493437 + AT_rich Low_complexity Low_complexity 1 44 0 201 244 0 0 chr5 112136736 112136781 -87493369 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 1106 259 84 39 chr5 112137543 112137925 -87492225 - L3 LINE CR1 -108 1469 1071 2127 128 0 10 chr5 112137981 112138287 -87491863 + AluSx SINE Alu 1 303 -9 266 284 108 7 chr5 112138363 112138502 -87491648 + MIR SINE MIR 16 164 -63 34 24 0 0 chr5 112138603 112138644 -87491506 + AT_rich Low_complexity Low_complexity 1 41 0 27 29 0 0 chr5 112139166 112139200 -87490950 + AT_rich Low_complexity Low_complexity 1 34 0 2324 102 3 0 chr5 112139583 112139887 -87490263 - AluSc SINE Alu -4 305 1 280 98 20 20 chr5 112140126 112140177 -87489973 - HSMAR1 DNA Mariner 0 1287 1237 568 278 39 42 chr5 112140270 112140476 -87489674 - MIR SINE MIR -57 205 1 504 244 84 66 chr5 112140600 112140813 -87489337 - MIR SINE MIR -36 226 10 2493 147 26 5 chr5 112141592 112142015 -87488135 + Tigger2a DNA MER2_type 2 433 -1 1991 145 3 20 chr5 112142428 112142731 -87487419 + AluJb SINE Alu 2 299 -13 198 0 0 0 chr5 112144129 112144151 -87485999 + (T)n Simple_repeat Simple_repeat 1 22 0 320 313 61 0 chr5 112146413 112146512 -87483638 + L2 LINE L2 3159 3263 -9 1438 191 58 36 chr5 112147859 112148221 -87481929 + MLT1A2 LTR MaLR 1 370 -4 216 0 0 0 chr5 112151744 112151768 -87478382 + (A)n Simple_repeat Simple_repeat 1 24 0 1932 100 0 0 chr5 112152437 112152708 -87477442 + L1PA8 LINE L1 5902 6172 0 2021 149 0 0 chr5 112153851 112154140 -87476010 - AluSx SINE Alu -23 289 1 653 258 26 86 chr5 112154797 112155065 -87475085 + MIR SINE MIR 1 252 -10 2125 97 26 26 chr5 112155285 112155596 -87474554 + AluY SINE Alu 1 311 0 396 258 47 16 chr5 112156235 112156363 -87473787 - L2 LINE L2 -4 3309 3178 1290 120 0 0 chr5 112156653 112156837 -87473313 - AluSg SINE Alu 0 309 126 562 93 0 0 chr5 112156838 112156913 -87473237 - AluSg SINE Alu -243 75 1 400 343 0 0 chr5 112156929 112157066 -87473084 - L2 LINE L2 -575 2739 2603 199 299 92 11 chr5 112157140 112157227 -87472923 - L2 LINE L2 0 3313 3220 2260 99 0 17 chr5 112157366 112157721 -87472429 + AluSg SINE Alu 1 310 0 270 194 0 0 chr5 112160422 112160484 -87469666 + (TGAA)n Simple_repeat Simple_repeat 1 62 0 4433 70 20 2 chr5 112160543 112161155 -87468995 + L1PA8A LINE L1 5482 6104 -27 1786 153 7 27 chr5 112161271 112161566 -87468584 + AluJb SINE Alu 1 289 -23 297 51 0 0 chr5 112162770 112162809 -87467341 + (TG)n Simple_repeat Simple_repeat 1 39 0 1758 137 43 0 chr5 112166183 112166483 -87463667 + MER2 DNA MER2_type 33 345 0 356 211 100 0 chr5 112166532 112166622 -87463528 + L1MC2 LINE L1 6217 6315 -29 468 320 82 5 chr5 112166699 112166893 -87463257 - MIR SINE MIR -53 209 1 328 365 189 32 chr5 112167070 112167382 -87462768 - L2 LINE L2 -2 3270 2910 704 100 0 52 chr5 112167953 112168224 -87461926 + AluSx SINE Alu 13 310 0 471 320 39 6 chr5 112168253 112168431 -87461719 - MIR3 SINE MIR 0 208 25 223 217 29 29 chr5 112171083 112171152 -87458998 + A-rich Low_complexity Low_complexity 4 72 0 404 308 28 21 chr5 112171757 112171900 -87458250 + MIR3 SINE MIR 19 162 -46 643 234 52 16 chr5 112176077 112176269 -87453881 - MER113 DNA MER1_type? -54 467 269 406 220 43 14 chr5 112176325 112176466 -87453684 - MER113 DNA MER1_type? -371 150 6 787 232 0 6 chr5 112177891 112178055 -87452095 - MER45A DNA AcHobo -15 163 1 585 116 0 21 chr5 112179621 112179716 -87450434 + FLAM_C SINE Alu 44 136 -7 2215 107 7 3 chr5 112182488 112182787 -87447363 - AluSq SINE Alu -13 300 1 439 310 59 20 chr5 112182858 112183061 -87447089 + Charlie8 DNA MER1_type 4 214 -2203 996 92 0 0 chr5 112184875 112185016 -87445134 + (TA)n Simple_repeat Simple_repeat 1 141 0 2328 92 0 3 chr5 112185016 112185311 -87444839 - AluSq SINE Alu -19 294 1 339 25 0 0 chr5 112185688 112185728 -87444422 + (TC)n Simple_repeat Simple_repeat 1 40 0 345 258 88 4 chr5 112188698 112188851 -87441299 - MIR SINE MIR -30 232 1 221 223 165 39 chr5 112189461 112189564 -87440586 - L2 LINE L2 -15 3298 3183 419 241 0 0 chr5 112189980 112190067 -87440083 - L2 LINE L2 -7 3306 3220 2109 133 3 3 chr5 112190541 112190843 -87439307 + AluSg SINE Alu 2 303 -7 1874 163 17 14 chr5 112190998 112191293 -87438857 + AluSx SINE Alu 1 296 -16 516 56 0 0 chr5 112191766 112191838 -87438312 + (TC)n Simple_repeat Simple_repeat 2 73 0 275 132 38 0 chr5 112191840 112191893 -87438257 + (CATA)n Simple_repeat Simple_repeat 2 56 0 335 235 59 12 chr5 112193566 112193651 -87436499 + MIR SINE MIR 19 107 -155 218 341 0 39 chr5 112193872 112194054 -87436096 + A-rich Low_complexity Low_complexity 1 175 0 180 111 0 0 chr5 112194433 112194460 -87435690 + (TC)n Simple_repeat Simple_repeat 2 28 0 244 267 242 17 chr5 112195492 112195612 -87434538 + MLT1I LTR MaLR 20 166 -243 298 234 0 0 chr5 112195734 112195798 -87434352 + MLT1I LTR MaLR 346 409 0 279 268 148 77 chr5 112196257 112196440 -87433710 + L2 LINE L2 3077 3272 0 421 267 82 30 chr5 112196688 112196823 -87433327 + L2 LINE L2 3123 3264 -8 1993 123 3 7 chr5 112197660 112197952 -87432198 - AluSg SINE Alu -19 291 1 2026 137 10 0 chr5 112198139 112198432 -87431718 - AluSx SINE Alu -16 296 1 2480 186 21 13 chr5 112198738 112199206 -87430944 + MER70A LTR ERVL 1 472 0 552 239 0 0 chr5 112199213 112199358 -87430792 - FLAM_A SINE Alu 0 145 1 186 133 0 0 chr5 112200265 112200295 -87429855 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2155 101 4 0 chr5 112200295 112200572 -87429578 - AluSq SINE Alu -33 280 3 21 26 0 26 chr5 112200789 112200808 -87429342 + AT_rich Low_complexity Low_complexity 1 19 -19 2116 117 0 7 chr5 112200808 112201098 -87429052 - AluSx SINE Alu -24 288 1 21 26 0 26 chr5 112201098 112201117 -87429033 + AT_rich Low_complexity Low_complexity 19 38 0 2251 79 21 0 chr5 112201680 112201971 -87428179 + AluSx SINE Alu 1 297 -15 189 0 0 0 chr5 112202498 112202519 -87427631 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 667 232 77 0 chr5 112202781 112202949 -87427201 - MIR SINE MIR -71 191 11 3292 138 102 93 chr5 112203028 112204481 -87425669 + pTR5 LTR ERV1 66 2438 0 2135 94 28 60 chr5 112205012 112205330 -87424820 + AluSq SINE Alu 6 313 0 1608 164 28 104 chr5 112206634 112206891 -87423259 - MER45B DNA AcHobo -543 1038 832 2279 97 0 0 chr5 112206891 112207179 -87422971 - AluSx SINE Alu -24 288 1 1608 164 28 104 chr5 112207179 112207390 -87422760 - MER45B DNA AcHobo -749 832 606 1119 256 93 0 chr5 112207408 112207709 -87422441 - MER45B DNA AcHobo -711 329 1 459 35 0 0 chr5 112207908 112207965 -87422185 + (TATG)n Simple_repeat Simple_repeat 4 60 0 21 0 0 0 chr5 112210215 112210236 -87419914 + AT_rich Low_complexity Low_complexity 1 21 0 296 284 14 0 chr5 112213574 112213648 -87416502 + MIR SINE MIR 74 148 -60 213 267 0 0 chr5 112214655 112214700 -87415450 - L2 LINE L2 -8 3305 3261 208 234 0 21 chr5 112214776 112214823 -87415327 + CT-rich Low_complexity Low_complexity 3 48 0 667 232 53 2 chr5 112214844 112215002 -87415148 - MIR SINE MIR -44 164 2 454 297 65 27 chr5 112216119 112216304 -87413846 - MIR3 SINE MIR -1 207 16 1304 153 23 23 chr5 112216531 112216747 -87413403 + AluJb SINE Alu 1 216 -96 418 167 127 40 chr5 112216747 112216873 -87413277 + Charlie5 DNA MER1_type 2486 2622 0 187 301 63 56 chr5 112216887 112217030 -87413120 - L2 LINE L2 -1321 1993 1850 2241 105 0 43 chr5 112218283 112218607 -87411543 - AluSg SINE Alu 0 310 1 429 328 8 8 chr5 112218693 112218815 -87411335 + L2 LINE L2 3189 3310 -3 3784 131 34 5 chr5 112218929 112219546 -87410604 + MER41B LTR ERV1 1 635 0 2219 97 3 7 chr5 112219963 112219979 -87410171 - AluSq SINE Alu -14 299 284 432 0 0 0 chr5 112219979 112220027 -87410123 + (TG)n Simple_repeat Simple_repeat 1 48 0 2219 97 3 7 chr5 112220027 112220309 -87409841 - AluSq SINE Alu -29 284 2 21 0 0 0 chr5 112220492 112220513 -87409637 + AT_rich Low_complexity Low_complexity 1 21 0 239 0 32 0 chr5 112221344 112221375 -87408775 + (CAA)n Simple_repeat Simple_repeat 2 33 0 228 67 0 0 chr5 112222233 112222263 -87407887 + (GGGAGA)n Simple_repeat Simple_repeat 2 31 0 530 169 22 88 chr5 112223683 112223819 -87406331 + L2 LINE L2 2731 2857 -457 1605 93 115 33 chr5 112223822 112224092 -87406058 + LTR9 LTR ERV1 1 292 -320 1667 97 4 13 chr5 112224092 112224320 -87405830 - AluSx SINE Alu -85 227 2 2020 124 7 0 chr5 112224332 112224658 -87405492 - AluSx SINE Alu 0 312 2 1595 195 10 0 chr5 112224989 112225156 -87404994 - AluJb SINE Alu -15 297 124 441 0 0 0 chr5 112225156 112225205 -87404945 + (TG)n Simple_repeat Simple_repeat 2 50 0 1595 195 10 0 chr5 112225205 112225329 -87404821 - AluJb SINE Alu -188 124 3 1117 243 47 4 chr5 112225802 112226159 -87403991 + L1MB7 LINE L1 5812 6184 0 707 214 130 16 chr5 112226339 112226531 -87403619 + MIR SINE MIR 9 222 -40 21 71 0 0 chr5 112228746 112228788 -87401362 + AT_rich Low_complexity Low_complexity 1 42 0 1956 158 2 87 chr5 112230051 112230282 -87399868 - MER47B DNA MER2_type -1905 418 240 1729 125 0 77 chr5 112230282 112230593 -87399557 - AluJo SINE Alu -15 297 11 1956 158 2 87 chr5 112230593 112230797 -87399353 - MER47B DNA MER2_type -2083 240 20 681 184 60 30 chr5 112230815 112230983 -87399167 - FAM SINE Alu -2 173 1 1214 205 66 50 chr5 112231381 112231683 -87398467 - AluJo SINE Alu -5 307 1 286 276 101 83 chr5 112234018 112234246 -87395904 + MIR SINE MIR 1 232 -30 243 221 29 15 chr5 112234263 112234331 -87395819 + (TATATG)n Simple_repeat Simple_repeat 6 74 0 2268 133 30 12 chr5 112234425 112234830 -87395320 - Tigger2 DNA MER2_type -40 2678 2267 296 191 29 29 chr5 112234814 112234882 -87395268 - Tigger2 DNA MER2_type -2649 69 2 * 2309 113 0 7 chr5 112236268 112236578 -87393572 - AluSg SINE Alu -2 308 1 215 253 35 103 chr5 112237118 112237205 -87392945 + MIR SINE MIR 118 198 -64 27 0 0 0 chr5 112237741 112237768 -87392382 + AT_rich Low_complexity Low_complexity 1 27 0 333 211 11 111 chr5 112237896 112238076 -87392074 - MER112 DNA MER1_type -97 163 2 232 312 55 28 chr5 112238213 112238322 -87391828 - MIR3 SINE MIR -8 200 89 1379 278 20 10 chr5 112239071 112239470 -87390680 - MLT1I LTR MaLR -6 403 1 450 326 47 16 chr5 112239633 112239857 -87390293 + MIR SINE MIR 17 248 -14 980 309 78 36 chr5 112240051 112240578 -87389572 + L3 LINE CR1 795 1343 -234 247 298 21 43 chr5 112245300 112245394 -87384756 + MER5B DNA MER1_type 87 178 0 2199 112 3 0 chr5 112245818 112246114 -87384036 + AluSg SINE Alu 1 297 -13 1110 123 7 0 chr5 112246204 112246350 -87383800 + AluSq/x SINE Alu 1 147 -165 1762 143 8 0 chr5 112246350 112246609 -87383541 + AluSq SINE Alu 40 300 -13 368 301 96 7 chr5 112246609 112246755 -87383395 - MIR SINE MIR -53 209 51 202 319 0 0 chr5 112247322 112247369 -87382781 - L2 LINE L2 -9 3263 3217 2022 100 0 25 chr5 112248476 112248756 -87381394 - AluSg SINE Alu -37 273 1 285 227 61 55 chr5 112249631 112249794 -87380356 + L1ME LINE L1 5521 5684 -437 2048 120 30 0 chr5 112249828 112250127 -87380023 + AluSg SINE Alu 1 308 -2 28 29 0 0 chr5 112250185 112250220 -87379930 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr5 112251965 112251988 -87378162 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 180 325 39 26 chr5 112253764 112253841 -87376309 + L2 LINE L2 3186 3263 -9 360 0 0 0 chr5 112255640 112255680 -87374470 + (CA)n Simple_repeat Simple_repeat 2 41 0 22 0 0 0 chr5 112255702 112255724 -87374426 + AT_rich Low_complexity Low_complexity 1 22 0 292 323 97 0 chr5 112257055 112257196 -87372954 - MIR3 SINE MIR -27 181 28 276 300 117 25 chr5 112258345 112258465 -87371685 - MIR SINE MIR -65 197 67 336 352 47 0 chr5 112259443 112259571 -87370579 + MIR SINE MIR 71 204 -58 709 221 31 79 chr5 112260005 112260259 -87369891 - MIR SINE MIR 0 262 21 334 208 39 13 chr5 112260263 112260340 -87369810 - MER58B DNA MER1_type 0 341 263 279 240 60 60 chr5 112260426 112260526 -87369624 - MIR SINE MIR -54 208 109 741 254 95 17 chr5 112261300 112261532 -87368618 - MIR SINE MIR 0 262 13 447 313 22 0 chr5 112263728 112263862 -87366288 - MIR SINE MIR -86 176 40 262 270 22 22 chr5 112265233 112265322 -87364828 - MIR SINE MIR -11 251 163 2079 129 0 0 chr5 112265456 112265743 -87364407 + AluSq SINE Alu 1 287 -26 445 16 0 31 chr5 112265746 112265810 -87364340 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 411 262 43 85 chr5 112266124 112266265 -87363885 + L2 LINE L2 3132 3266 -6 366 195 73 49 chr5 112266854 112266977 -87363173 + MIR SINE MIR 137 262 0 279 310 60 0 chr5 112267031 112267131 -87363019 - MIR SINE MIR -73 135 30 328 272 39 0 chr5 112269510 112269613 -87360537 + MIR3 SINE MIR 53 159 -49 2221 110 0 3 chr5 112270279 112270571 -87359579 - AluSg SINE Alu -19 291 1 183 100 0 0 chr5 112271247 112271277 -87358873 + (TC)n Simple_repeat Simple_repeat 1 30 0 1674 172 6 38 chr5 112272307 112272646 -87357504 - AluJo SINE Alu 0 312 1 214 357 10 20 chr5 112272673 112272771 -87357379 + L2 LINE L2 2578 2674 -640 231 114 0 0 chr5 112273514 112273558 -87356592 + (TTTTTG)n Simple_repeat Simple_repeat 4 47 0 1867 162 6 16 chr5 112276790 112277105 -87353045 - AluJo SINE Alu 0 312 1 993 138 0 0 chr5 112278263 112278515 -87351635 + (TA)n Simple_repeat Simple_repeat 1 252 0 1733 114 68 8 chr5 112278515 112278779 -87351371 + AluSx SINE Alu 29 308 -4 219 234 16 78 chr5 112284570 112284634 -87345516 - L2 LINE L2 -70 3202 3143 21 36 0 0 chr5 112287807 112287835 -87342315 + AT_rich Low_complexity Low_complexity 1 28 0 402 222 17 34 chr5 112287849 112287966 -87342184 - ORSL DNA AcHobo -160 115 1 253 359 11 0 chr5 112288019 112288111 -87342039 - MIR SINE MIR -70 192 100 294 308 7 14 chr5 112288120 112288228 -87341922 + MIR SINE MIR 16 124 -84 2344 59 7 0 chr5 112289378 112289665 -87340485 + AluY SINE Alu 22 310 -1 184 327 36 0 chr5 112290161 112290216 -87339934 - L3b LINE CR1 -8 1575 1519 180 273 15 61 chr5 112291142 112291208 -87338942 + L2 LINE L2 3210 3272 0 258 200 0 0 chr5 112293667 112293712 -87336438 + L2 LINE L2 3268 3312 -1 2439 73 0 3 chr5 112296430 112296732 -87333418 - AluY SINE Alu -10 301 1 1835 155 10 14 chr5 112299311 112299607 -87330543 - AluJb SINE Alu -17 295 1 527 233 85 94 chr5 112300069 112300400 -87329750 + MER102a DNA MER1_type 1 328 -2 2081 108 7 0 chr5 112300455 112300742 -87329408 + AluSx SINE Alu 1 289 -23 668 62 105 0 chr5 112300742 112301018 -87329132 + (TA)n Simple_repeat Simple_repeat 1 305 0 500 275 62 6 chr5 112302410 112302570 -87327580 + MER5B DNA MER1_type 1 169 -9 22 0 0 0 chr5 112304381 112304403 -87325747 + AT_rich Low_complexity Low_complexity 1 22 0 440 266 58 19 chr5 112304582 112304736 -87325414 + MIR SINE MIR 13 172 -90 2272 162 84 9 chr5 112305017 112305481 -87324669 - L1MB2 LINE L1 -2 6169 5671 22 35 0 0 chr5 112305496 112305525 -87324625 + AT_rich Low_complexity Low_complexity 1 29 0 419 262 40 16 chr5 112305819 112305965 -87324185 + MIR SINE MIR 30 177 -62 323 283 88 44 chr5 112307001 112307160 -87322990 - MIR SINE MIR -3 259 94 1070 243 128 24 chr5 112308022 112308483 -87321667 + L1MC4a LINE L1 5665 6173 -1635 193 306 111 0 chr5 112308997 112309069 -87321081 - L2 LINE L2 -238 3075 2996 2076 132 0 3 chr5 112309371 112309674 -87320476 - AluSx SINE Alu -10 302 1 202 328 0 0 chr5 112310563 112310621 -87319529 - MIR SINE MIR -17 245 188 789 171 6 38 chr5 112313064 112313222 -87316928 - AluJb SINE Alu -11 301 149 195 260 68 27 chr5 112313629 112313702 -87316448 - MER5B DNA MER1_type -101 77 2 473 71 14 0 chr5 112315405 112315475 -87314675 + (CA)n Simple_repeat Simple_repeat 2 72 0 410 235 39 10 chr5 112315511 112315613 -87314537 + MIR SINE MIR 69 173 -89 21 82 0 0 chr5 112321365 112321414 -87308736 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr5 112325438 112325462 -87304688 + AT_rich Low_complexity Low_complexity 1 24 0 264 100 0 0 chr5 112325481 112325521 -87304629 + (TG)n Simple_repeat Simple_repeat 2 41 0 285 29 0 0 chr5 112326096 112326130 -87304020 + (CA)n Simple_repeat Simple_repeat 1 34 0 * 330 26 0 0 chr5 112326129 112326168 -87303982 + (GA)n Simple_repeat Simple_repeat 2 40 0 260 313 38 61 chr5 112326230 112326361 -87303789 - L2 LINE L2 -3 3310 3183 427 252 0 44 chr5 112326773 112326908 -87303242 + FLAM_A SINE Alu 1 129 -4 245 188 0 0 chr5 112326959 112327007 -87303143 - L2 LINE L2 0 3272 3225 2432 63 0 13 chr5 112327816 112328118 -87302032 - AluY SINE Alu -13 298 1 2152 114 7 10 chr5 112328357 112328655 -87301495 - AluSg SINE Alu -13 297 1 302 279 149 32 chr5 112330440 112330594 -87299556 + MIR SINE MIR 21 192 -70 450 323 0 15 chr5 112331028 112331161 -87298989 + MLT1J LTR MaLR 209 339 -172 416 273 52 70 chr5 112331175 112331347 -87298803 - MER5B DNA MER1_type -3 175 7 230 345 18 48 chr5 112331433 112331601 -87298549 - MIR SINE MIR 0 262 100 2903 16 0 0 chr5 112331631 112331949 -87298201 + AluYb8 SINE Alu 1 318 0 23 0 0 0 chr5 112333769 112333792 -87296358 + AT_rich Low_complexity Low_complexity 1 23 0 1509 187 19 41 chr5 112335155 112335470 -87294680 - AluJo SINE Alu -4 308 1 1157 128 0 0 chr5 112336382 112336546 -87293604 + FRAM SINE Alu 3 166 0 710 293 0 5 chr5 112336898 112337086 -87293064 - MIR SINE MIR 0 262 76 21 0 0 0 chr5 112338103 112338124 -87292026 + AT_rich Low_complexity Low_complexity 1 21 0 1996 128 7 3 chr5 112338261 112338567 -87291583 + L1MC1 LINE L1 6016 6322 -11 1412 110 32 23 chr5 112338567 112338664 -87291486 - MER30 DNA MER1_type -6 224 129 2072 132 3 0 chr5 112338664 112338968 -87291182 + AluSx SINE Alu 1 305 -7 1412 110 32 23 chr5 112338968 112339089 -87291061 - MER30 DNA MER1_type -101 129 4 5691 129 38 2 chr5 112339118 112340042 -87290108 - Tigger3b DNA MER2_type -1 1230 274 573 196 0 10 chr5 112340040 112340142 -87290008 - Tigger3b DNA MER2_type -1129 102 2 * 345 24 0 0 chr5 112340142 112340184 -87289966 + (CA)n Simple_repeat Simple_repeat 2 43 0 259 216 10 10 chr5 112340216 112340313 -87289837 + (TA)n Simple_repeat Simple_repeat 2 98 0 262 304 5 43 chr5 112341002 112341186 -87288964 + CT-rich Low_complexity Low_complexity 1 177 0 1559 189 7 3 chr5 112343136 112343421 -87286729 + AluJo SINE Alu 11 296 -16 381 22 0 0 chr5 112346390 112346436 -87283714 + (TG)n Simple_repeat Simple_repeat 1 46 0 273 239 52 13 chr5 112346517 112346672 -87283478 + (TA)n Simple_repeat Simple_repeat 2 162 0 279 0 0 0 chr5 112346731 112346762 -87283388 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2250 66 0 28 chr5 112346764 112347051 -87283099 - AluY SINE Alu -32 279 1 1102 147 32 28 chr5 112347148 112347366 -87282784 + L1MA8 LINE L1 5893 6111 -180 1203 161 5 28 chr5 112347460 112347671 -87282479 - MER2 DNA MER2_type -139 206 1 860 129 59 0 chr5 112347671 112347716 -87282434 + L1MA8 LINE L1 6110 6151 -140 234 91 0 0 chr5 112347716 112347749 -87282401 + (CA)n Simple_repeat Simple_repeat 2 34 0 860 129 59 0 chr5 112347749 112347873 -87282277 + L1MA8 LINE L1 6151 6289 -2 905 251 33 23 chr5 112348216 112348463 -87281687 + MIR SINE MIR 1 241 -21 648 120 0 0 chr5 112349855 112349955 -87280195 + (TAGA)n Simple_repeat Simple_repeat 1 100 0 2126 105 10 10 chr5 112349978 112350273 -87279877 + AluSx SINE Alu 1 295 -17 27 62 0 0 chr5 112350589 112350637 -87279513 + AT_rich Low_complexity Low_complexity 1 48 0 1621 121 61 7 chr5 112351076 112351373 -87278777 + L1MA8 LINE L1 5979 6291 0 270 0 0 0 chr5 112352773 112352803 -87277347 + (TAA)n Simple_repeat Simple_repeat 1 30 0 180 273 73 0 chr5 112353505 112353560 -87276590 + L2 LINE L2 3255 3313 0 2118 129 10 0 chr5 112353595 112353904 -87276246 - AluSx SINE Alu 0 312 1 907 81 32 0 chr5 112353919 112354042 -87276108 - L1PA10 LINE L1 -15 6153 6027 416 161 0 12 chr5 112355072 112355153 -87274997 + L1MA9 LINE L1 6057 6136 -176 181 320 0 20 chr5 112355314 112355364 -87274786 - L2 LINE L2 -15 3257 3209 23 0 0 0 chr5 112357135 112357158 -87272992 + AT_rich Low_complexity Low_complexity 1 23 0 454 271 60 26 chr5 112357885 112358036 -87272114 - MIR3 SINE MIR -13 195 40 302 314 50 0 chr5 112358050 112358171 -87271979 - MIR3 SINE MIR -37 171 45 776 278 49 25 chr5 112358650 112358895 -87271255 - MIR SINE MIR -2 260 10 283 302 57 0 chr5 112359563 112359669 -87270481 + L3b LINE CR1 1355 1466 -117 403 261 87 49 chr5 112360074 112360258 -87269892 + MIR SINE MIR 69 259 -3 636 109 20 10 chr5 112360905 112361006 -87269144 + L1MC1 LINE L1 6232 6333 0 27 81 0 0 chr5 112361770 112361832 -87268318 + AT_rich Low_complexity Low_complexity 1 62 0 257 226 54 65 chr5 112365606 112365699 -87264451 - MIR SINE MIR -59 203 112 22 35 0 0 chr5 112366528 112366557 -87263593 + AT_rich Low_complexity Low_complexity 1 29 0 510 234 171 38 chr5 112367601 112367759 -87262391 + MER5A DNA MER1_type 11 189 0 461 268 0 36 chr5 112367781 112367893 -87262257 + L2 LINE L2 3202 3309 -4 24 32 0 0 chr5 112367930 112367961 -87262189 + AT_rich Low_complexity Low_complexity 1 31 0 189 175 0 0 chr5 112368395 112368435 -87261715 + T-rich Low_complexity Low_complexity 1 40 0 288 0 0 0 chr5 112369166 112369198 -87260952 + (TA)n Simple_repeat Simple_repeat 2 33 0 225 154 0 0 chr5 112369997 112370036 -87260114 + A-rich Low_complexity Low_complexity 1 39 0 32 43 0 0 chr5 112370864 112370910 -87259240 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr5 112371668 112371690 -87258460 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 112372674 112372703 -87257447 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 112373856 112373882 -87256268 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 112374929 112374957 -87255193 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 112376557 112376579 -87253571 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr5 112378909 112378930 -87251220 + (A)n Simple_repeat Simple_repeat 1 21 0 25 75 0 0 chr5 112379867 112379920 -87250230 + GC_rich Low_complexity Low_complexity 1 53 0 207 0 0 0 chr5 112381382 112381405 -87248745 + (T)n Simple_repeat Simple_repeat 1 23 0 3316 142 42 20 chr5 112383849 112384441 -87245709 - MER6A DNA MER2_type 0 605 1 28 61 0 0 chr5 112384531 112384580 -87245570 + AT_rich Low_complexity Low_complexity 1 49 0 590 217 63 46 chr5 112384971 112385029 -87245121 - MER5B DNA MER1_type 0 178 122 180 0 0 0 chr5 112385029 112385049 -87245101 + (CAA)n Simple_repeat Simple_repeat 2 21 0 590 217 63 46 chr5 112385049 112385165 -87244985 - MER5B DNA MER1_type -56 122 1 21 0 0 0 chr5 112385619 112385640 -87244510 + AT_rich Low_complexity Low_complexity 1 21 0 1588 179 24 14 chr5 112386659 112386956 -87243194 + AluJo SINE Alu 6 305 -7 189 0 0 0 chr5 112387314 112387335 -87242815 + (CA)n Simple_repeat Simple_repeat 2 22 0 777 243 122 58 chr5 112388932 112388984 -87241166 + MLT1H LTR MaLR 57 104 -445 225 0 0 0 chr5 112388984 112389009 -87241141 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 777 243 122 58 chr5 112389009 112389334 -87240816 + MLT1H LTR MaLR 104 458 -91 186 43 0 0 chr5 112390290 112390313 -87239837 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 263 322 0 11 chr5 112390325 112390415 -87239735 + L2 LINE L2 3184 3272 0 547 333 83 40 chr5 112390850 112391455 -87238695 + L2 LINE L2 2623 3255 -17 186 43 0 0 chr5 112391459 112391482 -87238668 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 213 132 0 0 chr5 112391997 112392035 -87238115 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 306 326 97 7 chr5 112392049 112392193 -87237957 - L2 LINE L2 0 3272 3116 1439 281 51 32 chr5 112392544 112393093 -87237057 - L2 LINE L2 0 3313 2744 2186 123 0 10 chr5 112393093 112393394 -87236756 + AluSq SINE Alu 1 298 -15 1439 281 51 32 chr5 112393394 112393519 -87236631 - L2 LINE L2 -569 2744 2623 2026 154 0 0 chr5 112393664 112393975 -87236175 - AluSx SINE Alu -1 311 1 336 308 71 28 chr5 112394900 112395082 -87235068 + MIR SINE MIR 2 191 -71 949 207 0 9 chr5 112395377 112395588 -87234562 + MER33 DNA MER1_type 1 198 -99 1230 158 5 0 chr5 112395588 112395797 -87234353 + MER2 DNA MER2_type 1 210 -135 24 53 0 0 chr5 112395832 112395870 -87234280 + AT_rich Low_complexity Low_complexity 1 38 0 332 231 0 0 chr5 112395871 112395936 -87234214 + MER2 DNA MER2_type 281 345 0 486 152 30 61 chr5 112395936 112396068 -87234082 + MER33 DNA MER1_type 197 324 0 204 211 0 0 chr5 112396080 112396118 -87234032 + GA-rich Low_complexity Low_complexity 3 40 0 13871 155 39 26 chr5 112396139 112400099 -87230051 + L1MA3 LINE L1 12 3918 -3806 2245 103 3 16 chr5 112400099 112400411 -87229739 + AluY SINE Alu 1 308 -3 13871 155 39 26 chr5 112400411 112402195 -87227955 + L1MA3 LINE L1 3918 5677 -2047 2327 102 0 0 chr5 112402195 112402498 -87227652 + AluSg SINE Alu 1 303 -7 13871 155 39 26 chr5 112402498 112403485 -87226665 + L1MA3 LINE L1 5677 6649 -1075 2116 108 58 25 chr5 112403485 112403846 -87226304 - THE1C LTR MaLR -2 373 1 13871 155 39 26 chr5 112403846 112404333 -87225817 + L1MA3 LINE L1 6649 7714 -10 236 360 81 0 chr5 112404514 112404600 -87225550 - L2 LINE L2 -44 3228 3136 328 179 188 62 chr5 112406163 112406275 -87223875 - MER5B DNA MER1_type -17 161 36 600 226 8 0 chr5 112406444 112406577 -87223573 - MER94 DNA DNA 0 134 1 509 277 45 15 chr5 112407845 112408047 -87222103 - Charlie8 DNA MER1_type -2147 270 63 889 148 96 53 chr5 112408719 112408928 -87221222 - MER20 DNA MER1_type 0 219 2 1584 146 27 10 chr5 112409868 112410162 -87219988 + L1MC2 LINE L1 6046 6344 0 398 236 146 22 chr5 112411069 112411203 -87218947 + MIR SINE MIR 4 152 -56 257 303 92 66 chr5 112411560 112411712 -87218438 + MIR3 SINE MIR 31 186 -22 240 306 39 33 chr5 112412148 112412328 -87217822 + L1ME LINE L1 4633 4813 -1333 309 286 156 0 chr5 112412401 112412593 -87217557 + L1ME LINE L1 4931 5152 -994 264 313 161 5 chr5 112412591 112412802 -87217348 + L1ME LINE L1 5533 5776 -394 * 22 0 0 0 chr5 112413113 112413135 -87217015 + AT_rich Low_complexity Low_complexity 1 22 0 291 296 12 0 chr5 112414724 112414805 -87215345 + (CA)n Simple_repeat Simple_repeat 1 82 0 232 175 58 29 chr5 112414990 112415093 -87215057 + (TATAA)n Simple_repeat Simple_repeat 4 109 0 29 0 0 0 chr5 112415106 112415135 -87215015 + AT_rich Low_complexity Low_complexity 1 29 0 224 227 106 0 chr5 112415502 112415568 -87214582 - MIR3 SINE MIR -2 206 134 310 303 157 28 chr5 112415645 112415823 -87214327 + HAL1 LINE L1 10 210 -2297 564 312 102 0 chr5 112415823 112416028 -87214122 - MIR SINE MIR -1 261 36 257 258 81 75 chr5 112416221 112416407 -87213743 + HAL1 LINE L1 639 825 -1682 525 238 18 36 chr5 112416410 112416578 -87213572 - L1MCc LINE L1 -5026 1397 1233 * 1541 252 69 68 chr5 112416542 112417786 -87212364 + L1ME3A LINE L1 4927 6169 -1 22 35 0 0 chr5 112418047 112418076 -87212074 + AT_rich Low_complexity Low_complexity 1 29 0 1438 169 117 4 chr5 112418264 112418530 -87211620 - AluJb SINE Alu -5 297 2 209 311 16 0 chr5 112418559 112418620 -87211530 + (CATATA)n Simple_repeat Simple_repeat 1 62 0 323 311 0 0 chr5 112418623 112418713 -87211437 + L1MC4 LINE L1 6614 6703 -1339 544 238 0 12 chr5 112418718 112418878 -87211272 + (TA)n Simple_repeat Simple_repeat 1 158 0 225 214 0 0 chr5 112418890 112418946 -87211204 + L1MC4 LINE L1 6648 6703 -1339 227 225 14 0 chr5 112418952 112419023 -87211127 + (TA)n Simple_repeat Simple_repeat 2 73 0 1321 219 131 35 chr5 112419031 112419053 -87211097 - MLT2B1 LTR ERVL -40 477 459 207 0 0 0 chr5 112419053 112419076 -87211074 + (GA)n Simple_repeat Simple_repeat 2 24 0 1321 219 131 35 chr5 112419076 112419483 -87210667 - MLT2B1 LTR ERVL -58 459 1 500 302 112 46 chr5 112419801 112420047 -87210103 - L1ME4a LINE L1 -28 6093 5808 2018 135 7 3 chr5 112420047 112420344 -87209806 - AluSx SINE Alu -14 298 1 500 302 112 46 chr5 112420344 112420507 -87209643 - L1ME4a LINE L1 -313 5808 5657 262 223 35 52 chr5 112420643 112420830 -87209320 - L1P4 LINE L1 -715 5450 5265 1896 188 65 45 chr5 112422016 112422528 -87207622 + L1MD2 LINE L1 5834 6355 -4 184 271 10 119 chr5 112422762 112422822 -87207328 + MER5B DNA MER1_type 68 113 -76 198 0 0 0 chr5 112422822 112422844 -87207306 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 184 271 10 119 chr5 112422844 112422911 -87207239 + MER5B DNA MER1_type 113 186 -3 * 399 325 50 64 chr5 112422911 112422972 -87207178 - L2 LINE L2 -1087 2227 2167 859 190 11 17 chr5 112422972 112423151 -87206999 - MER5B DNA MER1_type 0 178 1 399 325 50 64 chr5 112423151 112423439 -87206711 - L2 LINE L2 -1147 2167 1883 215 316 79 97 chr5 112423378 112423606 -87206544 - MIR SINE MIR 0 262 39 * 1435 217 88 41 chr5 112424241 112424776 -87205374 + L1ME3A LINE L1 5587 6146 -24 7080 144 68 48 chr5 112425188 112426364 -87203786 + L1MCa LINE L1 42 1193 -5233 2277 117 0 0 chr5 112426364 112426664 -87203486 + AluSg SINE Alu 1 300 -10 7080 144 68 48 chr5 112426664 112427683 -87202467 + L1MCa LINE L1 1193 2367 -4059 14711 186 28 33 chr5 112427701 112431759 -87198391 + L1P3 LINE L1 10 4097 -2364 1198 119 81 19 chr5 112431760 112431970 -87198180 + L1PA10 LINE L1 5946 6168 0 3240 238 26 10 chr5 112431982 112432646 -87197504 + L1MCa LINE L1 2366 3056 -3370 2308 78 0 16 chr5 112432646 112432953 -87197197 + AluY SINE Alu 1 302 -9 3240 238 26 10 chr5 112432953 112433415 -87196735 + L1MCa LINE L1 3056 3509 -2917 26 88 0 0 chr5 112433446 112433514 -87196636 + GC_rich Low_complexity Low_complexity 1 68 0 189 0 0 0 chr5 112433523 112433544 -87196606 + (CAG)n Simple_repeat Simple_repeat 1 21 0 1996 169 19 0 chr5 112435839 112436205 -87193945 + L1MC1 LINE L1 5956 6328 -5 825 151 114 0 chr5 112438661 112438827 -87191323 - MER5A DNA MER1_type -2 187 3 671 276 23 0 chr5 112438837 112439011 -87191139 + MER5B DNA MER1_type 1 178 0 203 255 0 59 chr5 112439022 112439073 -87191077 + MER5B DNA MER1_type 2 49 -129 587 130 15 69 chr5 112439082 112439213 -87190937 - L1MB7 LINE L1 -19 6165 6042 390 248 132 31 chr5 112439213 112439342 -87190808 - MER5B DNA MER1_type -34 144 3 2077 125 0 0 chr5 112439721 112440008 -87190142 + AluSx SINE Alu 14 300 -12 1467 187 50 7 chr5 112440123 112440401 -87189749 - AluJo SINE Alu -12 300 11 269 303 64 64 chr5 112440562 112440750 -87189400 + MIR SINE MIR 51 238 -24 596 322 64 41 chr5 112441323 112441611 -87188539 - L1MC4a LINE L1 -1922 5886 5606 2119 124 0 3 chr5 112441611 112441909 -87188241 + AluSq SINE Alu 1 297 -16 596 322 64 41 chr5 112441909 112442228 -87187922 - L1MC4a LINE L1 -2202 5606 5265 374 278 97 41 chr5 112442591 112443148 -87187002 - L1MC4a LINE L1 -1445 4701 4114 1751 168 17 0 chr5 112443492 112443783 -87186367 - 7SLRNA srpRNA srpRNA -20 300 5 1484 291 122 17 chr5 112444132 112444731 -87185419 - L3 LINE CR1 -534 1043 382 333 330 97 0 chr5 112444937 112445113 -87185037 - MLT1K LTR MaLR -296 292 100 233 219 27 14 chr5 112445284 112445357 -87184793 + (TA)n Simple_repeat Simple_repeat 1 74 0 550 292 47 39 chr5 112448550 112448807 -87181343 + MIR SINE MIR 4 262 0 515 264 45 40 chr5 112449120 112449321 -87180829 + L2 LINE L2 3111 3312 -1 204 195 24 110 chr5 112449836 112449918 -87180232 - L2 LINE L2 -81 3232 3158 1108 194 146 39 chr5 112450129 112450459 -87179691 - MLT1A1 LTR MaLR 0 365 1 189 0 0 0 chr5 112450785 112450806 -87179344 + (T)n Simple_repeat Simple_repeat 1 21 0 336 152 0 0 chr5 112452760 112452826 -87177324 + (TA)n Simple_repeat Simple_repeat 2 67 0 368 288 21 143 chr5 112453200 112453585 -87176565 - L2 LINE L2 -2 3270 2933 534 263 83 13 chr5 112453612 112453768 -87176382 - L2 LINE L2 -489 2825 2659 339 335 75 13 chr5 112454724 112454963 -87175187 - L3 LINE CR1 -200 1377 1124 738 261 11 5 chr5 112455499 112455687 -87174463 + MER5A DNA MER1_type 1 189 0 182 114 0 29 chr5 112458198 112458233 -87171917 + (GGA)n Simple_repeat Simple_repeat 1 34 0 296 354 33 51 chr5 112458235 112458450 -87171700 + L3b LINE CR1 1193 1403 -180 438 253 34 34 chr5 112458705 112458851 -87171299 + MIR SINE MIR 6 151 -111 623 278 44 15 chr5 112460304 112460509 -87169641 + MIR SINE MIR 47 257 -5 2718 230 54 20 chr5 112460969 112461320 -87168830 + L1ME2 LINE L1 4616 4953 -1211 2420 113 8 46 chr5 112461320 112461710 -87168440 + THE1C LTR MaLR 1 375 0 9818 112 45 25 chr5 112461710 112463259 -87166891 + THE1C-int LTR MaLR 1 1580 0 2346 109 5 58 chr5 112463260 112463655 -87166495 + THE1C LTR MaLR 2 375 0 2718 230 54 20 chr5 112463655 112464778 -87165372 + L1ME2 LINE L1 4952 6153 -11 300 310 44 0 chr5 112464939 112465052 -87165098 + L1MC4 LINE L1 7923 8040 -2 222 293 52 84 chr5 112465101 112465292 -87164858 - L2 LINE L2 -531 2783 2599 318 279 43 94 chr5 112465326 112465602 -87164548 - L2 LINE L2 -805 2509 2248 962 186 63 120 chr5 112465607 112465989 -87164161 - MLT1A1 LTR MaLR -5 360 1 277 266 193 33 chr5 112465989 112466233 -87163917 - L2 LINE L2 -1062 2252 1970 229 356 123 14 chr5 112466255 112466401 -87163749 - L2 LINE L2 -215 3057 2896 796 154 0 144 chr5 112466537 112466732 -87163418 - MER5A DNA MER1_type -22 167 1 518 332 97 17 chr5 112467859 112468148 -87162002 + L3 LINE CR1 1085 1396 -181 * 707 293 89 4 chr5 112468146 112468371 -87161779 + MIR SINE MIR 6 249 -13 357 355 0 16 chr5 112468866 112468987 -87161163 - L2 LINE L2 -5 3267 3149 2339 112 0 0 chr5 112470366 112470670 -87159480 + AluSg SINE Alu 1 304 -6 446 307 29 15 chr5 112474824 112474961 -87155189 + MER91A DNA MER1_type 23 161 -35 180 0 0 0 chr5 112475244 112475264 -87154886 + (T)n Simple_repeat Simple_repeat 1 20 0 538 296 36 18 chr5 112475510 112475730 -87154420 + MER102a DNA MER1_type 92 315 -15 7865 117 26 2 chr5 112476229 112477471 -87152679 - Tigger1 DNA MER2_type 0 2418 1147 243 278 62 0 chr5 112480279 112480376 -87149774 - L1ME4a LINE L1 -196 5925 5823 424 282 66 73 chr5 112480892 112481165 -87148985 - MER102a DNA MER1_type -4 326 56 468 273 122 35 chr5 112482284 112482654 -87147496 + L1ME4a LINE L1 5718 6119 -2 2028 139 0 7 chr5 112484596 112484899 -87145251 - AluJb SINE Alu -10 302 2 257 217 0 14 chr5 112486518 112486587 -87143563 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 963 171 39 147 chr5 112488420 112488834 -87141316 - Zaphod DNA AcHobo 0 4031 3663 747 178 81 17 chr5 112488871 112489045 -87141105 - L1MB5 LINE L1 -8 6166 5982 21 104 0 0 chr5 112489183 112489260 -87140890 + AT_rich Low_complexity Low_complexity 1 77 0 690 203 34 68 chr5 112489485 112489722 -87140428 + MLT2B1 LTR ERVL 282 510 -10 3302 232 50 25 chr5 112489728 112489926 -87140224 - L1M4 LINE L1 -5539 1003 811 366 23 0 0 chr5 112489926 112489969 -87140181 + (TG)n Simple_repeat Simple_repeat 2 44 0 3302 232 50 25 chr5 112489969 112490736 -87139414 - L1M4 LINE L1 -5731 811 14 371 273 88 31 chr5 112490747 112490941 -87139209 - HAL1b LINE L1 -764 584 380 431 307 98 12 chr5 112490956 112491200 -87138950 + MER77 LTR ERV1 328 592 -13 706 274 42 7 chr5 112491290 112491600 -87138550 - L1M4 LINE L1 -818 5328 5008 30 0 0 0 chr5 112493499 112493529 -87136621 + AT_rich Low_complexity Low_complexity 1 30 0 264 241 74 37 chr5 112493747 112493855 -87136295 + MER103 DNA DNA 1 112 -54 347 276 47 24 chr5 112493905 112494075 -87136075 + L1ME4a LINE L1 5729 5902 -219 284 204 80 68 chr5 112494089 112494251 -87135899 + L1ME4a LINE L1 5956 6119 -2 695 262 11 27 chr5 112494365 112494548 -87135602 + MER58A DNA MER1_type 2 181 -43 285 167 0 0 chr5 112494553 112494601 -87135549 + MER96 DNA MER1_type? 26 73 -102 496 299 34 50 chr5 112494647 112494968 -87135182 - LTR16B LTR ERVL -1 463 148 1505 201 25 15 chr5 112495153 112495522 -87134628 + MLT1A1 LTR MaLR 1 365 0 2091 183 0 16 chr5 112496125 112496496 -87133654 + MLT1A1 LTR MaLR 1 365 0 3266 221 97 68 chr5 112496514 112497103 -87133047 + MLT1A1-int LTR MaLR 20 591 -780 239 26 79 0 chr5 112497103 112497141 -87133009 + A-rich Low_complexity Low_complexity 5 45 0 3266 221 97 68 chr5 112497141 112497865 -87132285 + MLT1A1-int LTR MaLR 591 1370 -1 2095 151 14 27 chr5 112497866 112498236 -87131914 + MLT1A1 LTR MaLR 1 365 0 349 282 89 35 chr5 112498345 112498547 -87131603 + MLT1K LTR MaLR 374 586 -2 451 255 42 52 chr5 112498624 112498816 -87131334 - MLT1L LTR MaLR 0 615 426 192 152 0 0 chr5 112498999 112499032 -87131118 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 690 219 0 152 chr5 112499126 112499382 -87130768 - MIR SINE MIR -6 256 40 349 306 9 19 chr5 112499381 112499489 -87130661 + MIR SINE MIR 22 128 -134 * 2146 219 81 38 chr5 112499543 112500123 -87130027 - MER77 LTR ERV1 0 605 1 3626 133 49 0 chr5 112500642 112501215 -87128935 - MER7C DNA MER2_type -1 601 1 311 283 11 0 chr5 112501332 112501424 -87128726 - Charlie7 DNA MER1_type -2511 101 9 5765 107 42 1 chr5 112502278 112503225 -87126925 + L1PA13 LINE L1 5181 6163 0 229 226 66 54 chr5 112503242 112503367 -87126783 + L1ME LINE L1 6 133 -5937 1534 242 141 40 chr5 112504049 112504342 -87125808 - L2 LINE L2 0 3313 3051 2549 129 41 22 chr5 112504342 112504759 -87125391 - MSTB LTR MaLR 0 426 2 1534 242 141 40 chr5 112504759 112505207 -87124943 - L2 LINE L2 -262 3051 2530 2150 109 55 0 chr5 112505348 112505641 -87124509 + AluSx SINE Alu 1 309 -3 180 0 0 0 chr5 112505728 112505748 -87124402 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 248 262 90 41 chr5 112505754 112505876 -87124274 + Charlie8 DNA MER1_type 85 212 -2205 247 275 0 0 chr5 112505881 112505950 -87124200 + Charlie8 DNA MER1_type 1350 1418 -999 31 26 0 0 chr5 112507831 112507869 -87122281 + AT_rich Low_complexity Low_complexity 1 38 0 841 176 0 0 chr5 112507871 112508007 -87122143 - FLAM_C SINE Alu -1 142 7 551 238 101 60 chr5 112510064 112510484 -87119666 - L2 LINE L2 -150 3163 2728 396 344 43 6 chr5 112510755 112510918 -87119232 - MIR3 SINE MIR -2 206 38 745 224 0 0 chr5 112511117 112511233 -87118917 - FLAM_A SINE Alu -17 116 1 2209 106 0 34 chr5 112511882 112512202 -87117948 - AluSg SINE Alu -1 309 1 230 309 140 15 chr5 112513769 112513905 -87116245 + L2 LINE L2 3119 3271 -1 493 217 172 6 chr5 112514025 112514180 -87115970 + MER5A DNA MER1_type 4 188 -1 23 0 0 0 chr5 112515445 112515468 -87114682 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 112515534 112515578 -87114572 + AT_rich Low_complexity Low_complexity 1 44 0 201 244 0 0 chr5 112515601 112515646 -87114504 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 1090 259 84 39 chr5 112516408 112516790 -87113360 - L3 LINE CR1 -108 1469 1071 2135 128 0 10 chr5 112516846 112517152 -87112998 + AluSx SINE Alu 1 303 -9 267 284 108 7 chr5 112517228 112517367 -87112783 + MIR SINE MIR 16 164 -63 34 24 0 0 chr5 112517468 112517509 -87112641 + AT_rich Low_complexity Low_complexity 1 41 0 27 29 0 0 chr5 112518031 112518065 -87112085 + AT_rich Low_complexity Low_complexity 1 34 0 2346 102 3 0 chr5 112518448 112518752 -87111398 - AluSc SINE Alu -4 305 1 302 33 7 7 chr5 112518991 112519042 -87111108 - MADE1 DNA Mariner 0 80 47 560 273 39 42 chr5 112519135 112519341 -87110809 - MIR SINE MIR -57 205 1 494 244 84 66 chr5 112519465 112519678 -87110472 - MIR SINE MIR -36 226 10 2692 147 26 5 chr5 112520455 112520878 -87109272 + Tigger2a DNA MER2_type 2 433 -1 1949 146 7 20 chr5 112521291 112521593 -87108557 + AluJb SINE Alu 2 299 -13 198 0 0 0 chr5 112522991 112523013 -87107137 + (T)n Simple_repeat Simple_repeat 1 22 0 315 313 61 0 chr5 112525274 112525373 -87104777 + L2 LINE L2 3159 3263 -9 1594 182 61 39 chr5 112526720 112527082 -87103068 + MLT1A2 LTR MaLR 1 370 -4 216 0 0 0 chr5 112530602 112530626 -87099524 + (A)n Simple_repeat Simple_repeat 1 24 0 2065 100 0 0 chr5 112531293 112531564 -87098586 + L1PA8 LINE L1 5902 6172 0 2007 149 0 0 chr5 112532707 112532996 -87097154 - AluSx SINE Alu -23 289 1 640 258 26 86 chr5 112533654 112533922 -87096228 + MIR SINE MIR 1 252 -10 2124 97 26 26 chr5 112534142 112534453 -87095697 + AluY SINE Alu 1 311 0 393 258 47 16 chr5 112535092 112535220 -87094930 - L2 LINE L2 -4 3309 3178 2208 98 7 19 chr5 112535510 112535817 -87094333 - AluSx SINE Alu -6 306 4 305 279 54 0 chr5 112536561 112536690 -87093460 - L1MDa LINE L1 -4100 2440 2305 3473 49 2 84 chr5 112536692 112537178 -87092972 - L1PA7 LINE L1 -2 6152 5707 891 236 44 38 chr5 112537345 112537638 -87092512 - L1M4 LINE L1 -3669 2477 2183 688 278 42 35 chr5 112538802 112539061 -87091089 + MER102a DNA MER1_type 59 319 -11 208 286 191 8 chr5 112539167 112539293 -87090857 + L2 LINE L2 2977 3125 -147 280 266 63 35 chr5 112539790 112539933 -87090217 - MIR SINE MIR -21 241 95 231 146 0 0 chr5 112540008 112540049 -87090101 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 575 253 12 30 chr5 112540222 112540388 -87089762 - Charlie8 DNA MER1_type -2156 261 99 794 202 73 11 chr5 112540680 112540858 -87089292 - MER5A DNA MER1_type 0 189 1 1754 153 71 20 chr5 112542043 112542396 -87087754 - MLT1D LTR MaLR -4 501 131 723 77 0 0 chr5 112542415 112542506 -87087644 - AluSg/x SINE Alu -11 298 208 419 165 0 142 chr5 112542509 112542572 -87087578 - MLT1D LTR MaLR -517 109 71 2437 187 29 0 chr5 112542572 112542984 -87087166 - MSTB LTR MaLR 0 426 3 419 165 0 142 chr5 112542984 112543047 -87087103 - MLT1D LTR MaLR -555 71 1 386 270 79 20 chr5 112543168 112543320 -87086830 - MIR SINE MIR -43 219 59 185 290 145 0 chr5 112544199 112544261 -87085889 - MER5C DNA MER1_type -1 323 253 1978 238 235 17 chr5 112544464 112545335 -87084815 - L2 LINE L2 -266 3047 1986 293 239 65 22 chr5 112545346 112545438 -87084712 + MIR SINE MIR 110 205 -57 187 212 15 91 chr5 112545530 112545596 -87084554 + L2 LINE L2 3251 3311 -2 430 217 12 0 chr5 112547210 112547293 -87082857 - L2 LINE L2 0 3272 3189 203 313 40 67 chr5 112547318 112547468 -87082682 - MER5A DNA MER1_type -5 184 39 398 264 8 25 chr5 112548026 112548147 -87082003 + 7SK RNA RNA 1 119 -74 226 214 0 0 chr5 112550241 112550283 -87079867 + CT-rich Low_complexity Low_complexity 3 44 0 233 214 0 0 chr5 112550846 112550888 -87079262 - L2 LINE L2 -8 3305 3264 1043 167 6 0 chr5 112551315 112551489 -87078661 - AluSc SINE Alu -10 299 125 2149 107 7 3 chr5 112552320 112552618 -87077532 - AluSq SINE Alu -14 299 1 227 277 115 62 chr5 112553129 112553259 -87076891 + L2 LINE L2 3165 3301 -12 633 224 73 18 chr5 112553298 112553463 -87076687 - MIR SINE MIR -62 200 27 366 293 275 0 chr5 112554120 112554258 -87075892 - MIR3 SINE MIR -43 219 45 3225 205 65 47 chr5 112555654 112556380 -87073770 + Zaphod DNA AcHobo 108 853 -3178 1219 119 28 46 chr5 112556380 112556598 -87073552 - L1MB2 LINE L1 -1 6170 5957 3225 205 65 47 chr5 112556598 112556736 -87073414 + Zaphod DNA AcHobo 853 987 -3044 1858 187 75 2 chr5 112556731 112557133 -87073017 + Zaphod DNA AcHobo 3590 4020 -11 * 208 333 0 0 chr5 112557197 112557248 -87072902 + L2 LINE L2 3174 3224 -48 227 357 86 36 chr5 112557287 112557427 -87072723 - L2 LINE L2 -1 3271 3125 510 215 8 16 chr5 112557505 112557626 -87072524 + MIR SINE MIR 127 246 -16 219 227 0 0 chr5 112557650 112557716 -87072434 + (TAG)n Simple_repeat Simple_repeat 2 67 0 248 355 102 32 chr5 112557898 112558338 -87071812 - L2 LINE L2 -2707 607 137 258 267 133 33 chr5 112558444 112558594 -87071556 + MIR SINE MIR 58 222 -40 207 340 52 0 chr5 112560248 112560345 -87069805 + L2 LINE L2 2251 2352 -962 298 298 97 29 chr5 112560351 112560531 -87069619 + MLT1F1 LTR MaLR 1 199 -362 1368 173 50 123 chr5 112560567 112560988 -87069162 + MLT1F1 LTR MaLR 178 567 0 1606 203 10 17 chr5 112561228 112561528 -87068622 - AluJb SINE Alu -12 300 3 295 293 42 89 chr5 112561551 112561810 -87068340 + L2 LINE L2 2866 3112 -160 785 261 35 31 chr5 112561858 112561967 -87068183 + MIR SINE MIR 5 112 -150 1757 147 72 33 chr5 112561967 112562328 -87067822 + THE1C LTR MaLR 1 375 0 785 261 35 31 chr5 112562328 112562475 -87067675 + MIR SINE MIR 112 262 0 295 295 71 23 chr5 112562908 112563088 -87067062 + MIR SINE MIR 13 207 -55 1931 171 7 3 chr5 112565143 112565487 -87064663 + AluJo SINE Alu 2 346 0 187 30 30 30 chr5 112565652 112565685 -87064465 + (CGAAA)n Simple_repeat Simple_repeat 2 34 0 261 233 12 12 chr5 112565790 112565876 -87064274 + (CCGGA)n Simple_repeat Simple_repeat 2 87 0 328 108 0 31 chr5 112566025 112566090 -87064060 + (GGAA)n Simple_repeat Simple_repeat 1 63 0 476 295 40 7 chr5 112567818 112567967 -87062183 + MIR SINE MIR 20 173 -89 307 325 88 15 chr5 112571866 112572140 -87058010 + L1MC/D LINE L1 4878 5171 -975 558 211 123 35 chr5 112572212 112572472 -87057678 + L1MC/D LINE L1 5272 5554 -2254 318 305 51 8 chr5 112572944 112573062 -87057088 + MIR3 SINE MIR 75 197 -11 255 152 0 0 chr5 112573810 112573856 -87056294 + (CA)n Simple_repeat Simple_repeat 2 47 0 430 310 93 41 chr5 112574813 112575158 -87054992 + MLT1I LTR MaLR 47 409 0 507 291 79 17 chr5 112575232 112575473 -87054677 + MLT1L LTR MaLR 360 615 0 237 108 0 0 chr5 112575502 112575539 -87054611 + (TCCA)n Simple_repeat Simple_repeat 4 40 0 186 275 176 30 chr5 112575799 112575930 -87054220 - L2 LINE L2 -1 3271 3122 449 305 99 25 chr5 112576376 112576779 -87053371 - LTR16A LTR ERVL -14 436 4 1487 178 3 65 chr5 112576924 112577245 -87052905 + AluJb SINE Alu 7 307 -5 565 337 75 20 chr5 112577695 112578137 -87052013 - ERVL LTR ERVL -1906 3858 3393 487 211 0 79 chr5 112578150 112578264 -87051886 + MER81 DNA DNA 5 109 -5 294 29 0 0 chr5 112578404 112578439 -87051711 - U2 snRNA snRNA -153 35 1 1306 301 52 14 chr5 112578440 112579015 -87051135 - ERVL LTR ERVL -4390 606 10 252 321 102 7 chr5 112579025 112579162 -87050988 - LTR16A LTR ERVL 0 450 301 5664 234 29 8 chr5 112579280 112579781 -87050369 + L1M4 LINE L1 3375 3864 -2282 2446 127 58 34 chr5 112579781 112580197 -87049953 + MSTB LTR MaLR 1 426 0 5664 234 29 8 chr5 112580197 112581369 -87048781 + L1M4 LINE L1 3864 5084 -1062 590 218 8 15 chr5 112581388 112581521 -87048629 + MSTD LTR MaLR 1 132 -264 2353 82 0 0 chr5 112582269 112582560 -87047590 - AluY SINE Alu -20 291 1 2201 103 0 3 chr5 112582803 112583095 -87047055 - AluSx SINE Alu -21 291 1 186 305 61 0 chr5 112584648 112584730 -87045420 + MIR SINE MIR 68 154 -108 668 201 45 50 chr5 112585129 112585308 -87044842 - MER5B DNA MER1_type 0 178 1 397 335 38 13 chr5 112585350 112585508 -87044642 + MER5B DNA MER1_type 1 162 -16 382 379 97 0 chr5 112585685 112585891 -87044259 - MIR SINE MIR -5 257 32 275 281 31 73 chr5 112585891 112585987 -87044163 + MER5A DNA MER1_type 1 92 -97 216 371 15 56 chr5 112586195 112586392 -87043758 - L2 LINE L2 -212 3060 2872 726 225 34 38 chr5 112586973 112587182 -87042968 - MER3 DNA MER1_type -1 208 1 200 271 157 0 chr5 112587451 112587521 -87042629 + L2 LINE L2 3182 3262 -10 286 303 13 0 chr5 112588047 112588123 -87042027 + L2 LINE L2 3191 3267 -5 273 250 87 29 chr5 112588185 112588289 -87041861 - MIR SINE MIR -46 216 107 291 306 131 47 chr5 112588384 112588659 -87041491 - LTR33 LTR ERVL -156 365 68 22 35 0 0 chr5 112589024 112589053 -87041097 + AT_rich Low_complexity Low_complexity 1 29 0 416 316 70 11 chr5 112590103 112590290 -87039860 - MIR SINE MIR -58 204 7 436 285 36 12 chr5 112590354 112590519 -87039631 + MIR SINE MIR 93 261 -1 427 297 27 7 chr5 112591009 112591157 -87038993 + L3 LINE CR1 1426 1576 -1 1247 216 10 153 chr5 112591434 112592363 -87037787 - L1MCa LINE L1 -3207 3219 2424 2273 199 81 84 chr5 112592432 112593012 -87037138 - L1MCa LINE L1 -4008 2418 1841 2406 31 3 0 chr5 112593012 112593300 -87036850 + L1PA4 LINE L1 5867 6155 0 2273 199 81 84 chr5 112593300 112593756 -87036394 - L1MCa LINE L1 -4585 1841 1385 464 274 51 46 chr5 112594184 112594359 -87035791 + MIR SINE MIR 12 187 -75 22 56 0 0 chr5 112595226 112595262 -87034888 + AT_rich Low_complexity Low_complexity 1 36 0 315 0 0 0 chr5 112595531 112595566 -87034584 + (TG)n Simple_repeat Simple_repeat 2 36 0 404 269 34 8 chr5 112597044 112597163 -87032987 + MIR SINE MIR 69 190 -72 4729 185 34 12 chr5 112598432 112598821 -87031329 + L1ME2 LINE L1 3 382 -6044 2321 103 26 63 chr5 112598821 112599199 -87030951 - THE1B LTR MaLR 0 364 1 11592 95 9 2 chr5 112599199 112600768 -87029382 - THE1B-int LTR MaLR 0 1580 1 1858 171 73 14 chr5 112600768 112601112 -87029038 - THE1B LTR MaLR 0 364 1 4729 185 34 12 chr5 112601112 112601681 -87028469 + L1ME2 LINE L1 381 984 -5442 189 196 0 0 chr5 112603815 112603866 -87026284 + (TAA)n Simple_repeat Simple_repeat 3 53 0 2534 242 65 40 chr5 112604364 112605327 -87024823 + L1ME2 LINE L1 4337 5324 -1102 304 296 50 89 chr5 112605367 112605546 -87024604 - L2 LINE L2 -268 3045 2874 346 220 83 38 chr5 112605548 112605680 -87024470 + L1ME2 LINE L1 5341 5478 -948 2504 228 36 52 chr5 112605725 112606709 -87023441 + L1ME2 LINE L1 5468 6435 -9 1893 184 34 6 chr5 112606815 112607168 -87022982 - MLT1A1 LTR MaLR 0 365 3 1462 206 28 0 chr5 112607175 112607496 -87022654 - MLT1A1-int LTR MaLR -6 1729 1400 1743 183 3 10 chr5 112607771 112608066 -87022084 - AluJb SINE Alu -19 293 1 299 339 59 3 chr5 112608087 112608273 -87021877 - L2 LINE L2 -19 3253 2999 246 376 67 13 chr5 112608812 112608961 -87021189 + L2 LINE L2 3116 3272 0 403 219 50 62 chr5 112609160 112609320 -87020830 + L2 LINE L2 3152 3309 -4 831 278 78 81 chr5 112610471 112610844 -87019306 - L2 LINE L2 -271 3042 2661 354 145 0 0 chr5 112610844 112610906 -87019244 + L1MA7 LINE L1 6230 6291 0 831 278 78 81 chr5 112610906 112611135 -87019015 - L2 LINE L2 -652 2661 2433 1684 122 4 0 chr5 112611135 112611372 -87018778 - THE1A LTR MaLR 0 355 118 19020 67 10 0 chr5 112611373 112613707 -87016443 + HERVL-A1 LTR ERVL 3298 5654 0 3092 98 0 0 chr5 112613707 112614107 -87016043 + MLT2A1 LTR ERVL 1 400 -44 309 169 0 0 chr5 112614109 112614192 -87015958 + (TA)n Simple_repeat Simple_repeat 1 83 0 296 40 140 0 chr5 112614195 112614245 -87015905 + MLT2A1 LTR ERVL 388 444 0 460 286 137 30 chr5 112614257 112614491 -87015659 - L2 LINE L2 -904 2410 2152 267 327 12 61 chr5 112664984 112665149 -86965001 - MIR SINE MIR -68 194 38 647 287 57 36 chr5 112665160 112665439 -86964711 + L2 LINE L2 2988 3272 -41 187 182 0 0 chr5 112665522 112665555 -86964595 - MER5A DNA MER1_type -139 50 18 1903 171 64 51 chr5 112666218 112666611 -86963539 + L1MC4 LINE L1 6689 7086 -956 1871 234 27 16 chr5 112666642 112667082 -86963068 + L1MD3 LINE L1 7540 7984 -11 386 270 79 20 chr5 112667704 112667856 -86962294 + MIR SINE MIR 59 219 -43 697 125 17 40 chr5 112669307 112669483 -86960667 + CT-rich Low_complexity Low_complexity 3 174 0 182 283 71 30 chr5 112670276 112670375 -86959775 - L3 LINE CR1 -1 1576 1474 22 35 0 0 chr5 112670835 112670864 -86959286 + AT_rich Low_complexity Low_complexity 1 29 0 904 238 49 14 chr5 112671043 112671266 -86958884 - MIR SINE MIR -20 242 12 315 254 232 14 chr5 112672823 112672961 -86957189 - MIR SINE MIR -44 218 51 1576 159 10 51 chr5 112674902 112675197 -86954953 - AluJb SINE Alu -14 298 16 22 56 0 0 chr5 112675738 112675774 -86954376 + AT_rich Low_complexity Low_complexity 1 36 0 699 275 43 0 chr5 112678064 112678275 -86951875 - MIR SINE MIR -8 254 35 362 245 219 33 chr5 112678561 112678712 -86951438 + L2 LINE L2 3127 3305 -8 348 309 94 37 chr5 112678803 112678994 -86951156 - L2 LINE L2 -245 3027 2826 * 472 304 126 27 chr5 112678977 112679240 -86950910 - L2 LINE L2 -4 3309 3021 343 297 162 7 chr5 112679232 112679380 -86950770 - MIR SINE MIR -69 193 23 * 392 283 24 54 chr5 112679623 112679789 -86950361 + MIR SINE MIR 52 212 -50 2686 236 61 42 chr5 112680310 112681230 -86948920 + L1MC4a LINE L1 5598 6534 -1274 198 236 0 0 chr5 112682923 112682978 -86947172 + A-rich Low_complexity Low_complexity 1 55 0 755 265 71 21 chr5 112683447 112683685 -86946465 + MIR SINE MIR 13 262 0 194 222 93 0 chr5 112683963 112684017 -86946133 - MIR SINE MIR -92 116 58 481 237 50 29 chr5 112684638 112684777 -86945373 - L2 LINE L2 -1 3312 3171 465 309 84 34 chr5 112684848 112685230 -86944920 + L2 LINE L2 1702 2102 -1212 361 271 194 0 chr5 112685204 112685333 -86944817 + MIR SINE MIR 109 262 0 * 333 263 113 38 chr5 112685361 112685494 -86944656 + L2 LINE L2 3171 3313 0 198 0 0 0 chr5 112686976 112686998 -86943152 + (T)n Simple_repeat Simple_repeat 1 22 0 1898 113 8 4 chr5 112687199 112687464 -86942686 + AluY SINE Alu 30 295 -16 805 218 23 6 chr5 112687895 112688069 -86942081 - MER5B DNA MER1_type 0 178 2 361 326 21 92 chr5 112689230 112689469 -86940681 + L2 LINE L2 2988 3209 -63 241 269 128 13 chr5 112689851 112689929 -86940221 + MIR SINE MIR 2 88 -174 346 266 184 9 chr5 112691050 112691159 -86938991 - L2 LINE L2 -4 3309 3182 343 325 36 41 chr5 112693095 112693172 -86936978 + L3b LINE CR1 1314 1390 -193 2426 134 70 7 chr5 112693172 112693575 -86936575 - MSTA LTR MaLR 0 428 1 343 325 36 41 chr5 112693575 112693691 -86936459 + L3b LINE CR1 1390 1506 -77 238 248 165 15 chr5 112693879 112694012 -86936138 - MIR SINE MIR -16 246 94 190 273 0 185 chr5 112694048 112694253 -86935897 - L2 LINE L2 -91 3181 3015 273 363 11 37 chr5 112694553 112694743 -86935407 - L2 LINE L2 -216 3056 2872 1754 153 71 20 chr5 112696157 112696510 -86933640 - MLT1D LTR MaLR -4 501 131 723 77 0 0 chr5 112696529 112696620 -86933530 - AluSg/x SINE Alu -11 299 209 419 165 0 142 chr5 112696623 112696686 -86933464 - MLT1D LTR MaLR -517 109 71 2437 187 29 0 chr5 112696686 112697098 -86933052 - MSTB LTR MaLR 0 426 3 419 165 0 142 chr5 112697098 112697161 -86932989 - MLT1D LTR MaLR -555 71 1 386 270 79 20 chr5 112697282 112697434 -86932716 - MIR SINE MIR -43 219 59 185 290 145 0 chr5 112698313 112698375 -86931775 - MER5C DNA MER1_type -1 323 253 1843 240 234 18 chr5 112698578 112699450 -86930700 - L2 LINE L2 -266 3047 1986 293 239 65 22 chr5 112699461 112699553 -86930597 + MIR SINE MIR 110 205 -57 187 212 15 91 chr5 112699645 112699711 -86930439 + L2 LINE L2 3251 3311 -2 430 217 12 0 chr5 112701324 112701407 -86928743 - L2 LINE L2 0 3272 3189 203 313 40 67 chr5 112701432 112701582 -86928568 - MER5A DNA MER1_type -5 184 39 398 264 8 25 chr5 112702140 112702261 -86927889 + 7SK RNA RNA 1 119 -74 226 214 0 0 chr5 112704355 112704397 -86925753 + CT-rich Low_complexity Low_complexity 3 44 0 233 214 0 0 chr5 112704960 112705002 -86925148 - L2 LINE L2 -8 3305 3264 1858 154 13 0 chr5 112705429 112705727 -86924423 - AluSx SINE Alu -10 302 1 227 277 115 62 chr5 112706238 112706368 -86923782 + L2 LINE L2 3165 3301 -12 633 224 73 18 chr5 112706407 112706572 -86923578 - MIR SINE MIR -62 200 27 366 293 275 0 chr5 112707229 112707367 -86922783 - MIR3 SINE MIR -43 219 45 3185 216 70 46 chr5 112708763 112709489 -86920661 + Zaphod DNA AcHobo 108 860 -3171 1219 119 28 46 chr5 112709489 112709707 -86920443 - L1MB2 LINE L1 -1 6170 5957 3185 216 70 46 chr5 112709707 112709871 -86920279 + Zaphod DNA AcHobo 860 1019 -3012 1858 187 75 2 chr5 112710020 112710422 -86919728 + Zaphod DNA AcHobo 3590 4020 -11 208 333 0 0 chr5 112710486 112710537 -86919613 + L2 LINE L2 3174 3224 -48 227 357 86 36 chr5 112710576 112710716 -86919434 - L2 LINE L2 -1 3271 3125 516 215 8 16 chr5 112710794 112710915 -86919235 + MIR SINE MIR 127 246 -16 219 227 0 0 chr5 112710939 112711005 -86919145 + (TAG)n Simple_repeat Simple_repeat 2 67 0 248 355 102 32 chr5 112711187 112711627 -86918523 - L2 LINE L2 -2707 607 137 258 267 133 33 chr5 112711733 112711883 -86918267 + MIR SINE MIR 58 222 -40 207 340 52 0 chr5 112713537 112713634 -86916516 + L2 LINE L2 2251 2352 -962 298 298 97 29 chr5 112713640 112713820 -86916330 + MLT1F1 LTR MaLR 1 199 -362 1374 174 50 121 chr5 112713856 112714276 -86915874 + MLT1F1 LTR MaLR 178 567 0 1606 203 10 17 chr5 112714516 112714816 -86915334 - AluJb SINE Alu -12 300 3 295 293 42 89 chr5 112714839 112715098 -86915052 + L2 LINE L2 2866 3112 -160 785 261 35 31 chr5 112715146 112715255 -86914895 + MIR SINE MIR 5 112 -150 1757 147 72 33 chr5 112715255 112715616 -86914534 + THE1C LTR MaLR 1 375 0 785 261 35 31 chr5 112715616 112715763 -86914387 + MIR SINE MIR 112 262 0 295 295 71 23 chr5 112716196 112716376 -86913774 + MIR SINE MIR 13 207 -55 1913 163 7 3 chr5 112718431 112718725 -86911425 + AluJo SINE Alu 2 296 -16 1281 34 0 21 chr5 112718728 112718962 -86911188 + (GAAA)n Simple_repeat Simple_repeat 1 229 0 476 295 40 7 chr5 112720085 112720234 -86909916 + MIR SINE MIR 20 173 -89 307 325 88 15 chr5 112724133 112724407 -86905743 + L1MC/D LINE L1 4878 5171 -975 558 211 123 35 chr5 112724479 112724739 -86905411 + L1MC/D LINE L1 5272 5554 -2254 318 305 51 8 chr5 112725212 112725330 -86904820 + MIR3 SINE MIR 75 197 -11 255 152 0 0 chr5 112726078 112726124 -86904026 + (CA)n Simple_repeat Simple_repeat 2 47 0 430 310 93 41 chr5 112727081 112727426 -86902724 + MLT1I LTR MaLR 47 409 0 507 291 79 17 chr5 112727500 112727741 -86902409 + MLT1L LTR MaLR 360 615 0 237 108 0 0 chr5 112727770 112727807 -86902343 + (TCCA)n Simple_repeat Simple_repeat 4 40 0 186 275 176 30 chr5 112728067 112728198 -86901952 - L2 LINE L2 -1 3271 3122 449 305 99 25 chr5 112728644 112729047 -86901103 - LTR16A LTR ERVL -14 436 4 1487 178 3 65 chr5 112729192 112729513 -86900637 + AluJb SINE Alu 7 307 -5 565 337 75 20 chr5 112729963 112730405 -86899745 - ERVL LTR ERVL -1906 3858 3393 487 211 0 79 chr5 112730418 112730532 -86899618 + MER81 DNA DNA 5 109 -5 294 29 0 0 chr5 112730672 112730707 -86899443 - U2 snRNA snRNA -153 35 1 1306 301 52 14 chr5 112730708 112731283 -86898867 - ERVL LTR ERVL -4390 606 10 331 315 91 15 chr5 112731293 112731490 -86898660 - LTR16A LTR ERVL 0 450 239 41 36 0 0 chr5 112732375 112732430 -86897720 + AT_rich Low_complexity Low_complexity 1 55 0 192 128 26 26 chr5 112733206 112733245 -86896905 - L2 LINE L2 -1 3312 3274 212 323 71 0 chr5 112733522 112733621 -86896529 + L2 LINE L2 3208 3313 0 447 287 57 25 chr5 112734412 112734569 -86895581 - MIR3 SINE MIR -41 167 6 579 311 51 30 chr5 112734977 112735311 -86894839 + L1ME2 LINE L1 97 437 -5633 1066 237 58 54 chr5 112735431 112736021 -86894129 - L1ME LINE L1 -4951 1648 1053 580 233 52 26 chr5 112736149 112736381 -86893769 - L1M4 LINE L1 -1712 4434 4197 336 250 36 9 chr5 112736508 112736620 -86893530 + L1ME2 LINE L1 3426 3540 -2540 986 219 29 0 chr5 112736814 112737056 -86893094 + L1ME2 LINE L1 3850 4098 -1982 2346 229 49 13 chr5 112737065 112737841 -86892309 + L1ME2 LINE L1 4005 4808 -1272 663 183 10 4 chr5 112737868 112738021 -86892129 - L1MC/D LINE L1 -416 5748 5596 367 21 0 0 chr5 112738021 112738068 -86892082 - MADE1 DNA Mariner -33 47 1 1300 257 20 29 chr5 112738098 112738546 -86891604 + L1ME2 LINE L1 5253 5696 -402 710 196 146 107 chr5 112738676 112739079 -86891071 + L1ME2 LINE L1 5679 6097 -1 396 0 0 0 chr5 112739270 112739314 -86890836 + (TA)n Simple_repeat Simple_repeat 2 45 0 905 281 31 49 chr5 112740122 112740414 -86889736 + L1ME3A LINE L1 5516 5799 -371 1899 128 101 15 chr5 112740414 112740750 -86889400 + MLT1A1 LTR MaLR 1 365 0 905 281 31 49 chr5 112740750 112740905 -86889245 + L1ME3A LINE L1 5799 5955 -215 437 289 95 50 chr5 112740911 112741153 -86888997 + L1ME3A LINE L1 5895 6147 -23 26 30 0 0 chr5 112743000 112743033 -86887117 + AT_rich Low_complexity Low_complexity 1 33 0 256 263 88 36 chr5 112743318 112743455 -86886695 - L1ME3A LINE L1 -219 5934 5791 524 267 151 17 chr5 112743481 112743773 -86886377 - L1ME3A LINE L1 -433 5714 5384 309 233 21 79 chr5 112743780 112743898 -86886252 - L1ME3A LINE L1 -1481 4648 4544 1756 213 32 59 chr5 112743898 112744372 -86885778 - LTR40b LTR ERVL -1 461 1 309 233 21 79 chr5 112744372 112744442 -86885708 - L1ME3A LINE L1 -1585 4544 4471 409 282 79 59 chr5 112744488 112744793 -86885357 - L1ME3A LINE L1 -1746 4383 4073 1548 198 38 0 chr5 112744793 112745081 -86885069 - AluJo SINE Alu -13 299 1 490 249 52 52 chr5 112745180 112745449 -86884701 - L1ME3A LINE L1 -5288 831 563 300 316 32 112 chr5 112745471 112745517 -86884633 - L1ME3A LINE L1 -5585 534 486 297 0 0 0 chr5 112745517 112745550 -86884600 + (TG)n Simple_repeat Simple_repeat 2 34 0 1687 173 0 53 chr5 112745550 112745850 -86884300 - AluJb SINE Alu -28 284 1 300 316 32 112 chr5 112745850 112746052 -86884098 - L1ME3A LINE L1 -5631 488 305 803 219 47 12 chr5 112746152 112746321 -86883829 - MER5A DNA MER1_type -11 178 4 856 269 19 0 chr5 112746338 112746554 -86883596 - MER58A DNA MER1_type -4 220 1 236 385 6 12 chr5 112746566 112746732 -86883418 - L1ME3A LINE L1 -5953 166 2 2164 116 79 17 chr5 112747358 112747711 -86882439 + THE1C LTR MaLR 1 375 0 234 0 0 0 chr5 112748282 112748308 -86881842 + (T)n Simple_repeat Simple_repeat 1 26 0 26 0 0 0 chr5 112750323 112750349 -86879801 + AT_rich Low_complexity Low_complexity 1 26 0 257 343 74 9 chr5 112751861 112751969 -86878181 + L2 LINE L2 3154 3268 -4 22 0 0 0 chr5 112753086 112753108 -86877042 + AT_rich Low_complexity Low_complexity 1 22 0 189 226 0 113 chr5 112753367 112753420 -86876730 - L2 LINE L2 -10 3262 3216 747 248 62 26 chr5 112754214 112754440 -86875710 - MIR SINE MIR 0 262 29 327 49 0 0 chr5 112754477 112754518 -86875632 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 756 226 11 23 chr5 112755022 112755199 -86874951 - MER5B DNA MER1_type 0 178 4 181 284 148 65 chr5 112756854 112757023 -86873127 + L2 LINE L2 1527 1709 -1605 200 272 182 82 chr5 112757069 112757873 -86872277 + L2 LINE L2 1795 2678 -636 383 192 26 13 chr5 112757982 112758060 -86872090 + MER58B DNA MER1_type 260 338 -3 231 329 0 29 chr5 112758066 112758136 -86872014 + L2 LINE L2 2685 2752 -562 288 336 117 0 chr5 112758238 112758366 -86871784 + L2 LINE L2 2917 3059 -213 404 324 65 24 chr5 112758582 112758875 -86871275 + MARNA DNA Mariner 146 450 -136 500 258 117 21 chr5 112759030 112759270 -86870880 + L1ME3A LINE L1 4993 5255 -891 676 288 84 43 chr5 112759271 112759907 -86870243 + L1ME3A LINE L1 5257 5946 -224 495 0 0 0 chr5 112760494 112760549 -86869601 + (TA)n Simple_repeat Simple_repeat 2 56 0 1434 186 65 0 chr5 112760553 112760694 -86869456 - AluJo SINE Alu -32 280 150 270 0 0 0 chr5 112760694 112760724 -86869426 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1434 186 65 0 chr5 112760724 112760845 -86869305 - AluJo SINE Alu -162 150 1 274 279 129 21 chr5 112760957 112761237 -86868913 + L1MC4a LINE L1 5866 6175 -1633 234 228 25 38 chr5 112762013 112762092 -86868058 + MIR3 SINE MIR 130 207 -1 590 307 98 22 chr5 112762600 112762958 -86867192 + L2 LINE L2 2449 2833 -481 318 283 245 25 chr5 112762956 112763115 -86867035 + MIR SINE MIR 66 259 -3 * 745 308 138 64 chr5 112763266 112763935 -86866215 + L3 LINE CR1 818 1535 -42 704 222 177 5 chr5 112763939 112764142 -86866008 - MIR SINE MIR -6 256 19 2487 53 3 7 chr5 112765072 112765376 -86864774 + AluY SINE Alu 1 303 -8 325 283 0 22 chr5 112765391 112765483 -86864667 - MIR SINE MIR -100 108 19 250 332 102 26 chr5 112765493 112765758 -86864392 + L2 LINE L2 2257 2541 -773 31 58 0 0 chr5 112767101 112767153 -86862997 + AT_rich Low_complexity Low_complexity 1 52 0 216 265 286 7 chr5 112768173 112768320 -86861830 + MER5A DNA MER1_type 2 189 0 370 270 230 0 chr5 112768396 112768596 -86861554 + MIR SINE MIR 4 249 -13 22 0 0 0 chr5 112770150 112770172 -86859978 + AT_rich Low_complexity Low_complexity 1 22 0 333 0 0 0 chr5 112771333 112771370 -86858780 + (CA)n Simple_repeat Simple_repeat 2 38 0 1685 132 99 108 chr5 112772192 112772617 -86857533 - L1MA7 LINE L1 -35 6256 5836 290 311 54 113 chr5 112772729 112773102 -86857048 - L2 LINE L2 -3 3269 2919 1852 153 3 28 chr5 112773121 112773478 -86856672 - AluJb SINE Alu 0 349 1 877 140 28 0 chr5 112774060 112774203 -86855947 + L1MB4 LINE L1 6024 6170 -10 285 203 174 14 chr5 112775193 112775262 -86854888 - L2 LINE L2 -18 3254 3175 268 376 41 36 chr5 112775422 112775643 -86854507 + MIR SINE MIR 20 241 -21 329 331 97 7 chr5 112778019 112778173 -86851977 - HAL1 LINE L1 -10 2497 2330 490 273 153 46 chr5 112778179 112778545 -86851605 - HAL1 LINE L1 -1865 642 238 583 209 30 0 chr5 112778625 112778759 -86851391 - L1MB4 LINE L1 -8 6172 6035 253 423 13 0 chr5 112778923 112779072 -86851078 - MIR3 SINE MIR -52 156 6 1881 75 0 0 chr5 112779404 112779645 -86850505 + L1PA5 LINE L1 5914 6154 0 275 173 93 13 chr5 112779944 112780019 -86850131 - L1MA9 LINE L1 -3 6309 6229 486 264 110 7 chr5 112780108 112780263 -86849887 - MIR SINE MIR -86 176 6 898 259 23 5 chr5 112780942 112781158 -86848992 + MER58A DNA MER1_type 3 222 -2 271 286 72 115 chr5 112783741 112784045 -86846105 + L2 LINE L2 2982 3272 0 318 218 11 46 chr5 112784052 112784139 -86846011 + L2 LINE L2 3186 3269 -3 186 43 0 0 chr5 112784139 112784162 -86845988 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 671 296 78 78 chr5 112784324 112784760 -86845390 - L3b LINE CR1 -33 1550 1115 353 210 261 8 chr5 112784949 112785068 -86845082 - MER5B DNA MER1_type -29 149 1 251 321 12 37 chr5 112785426 112785507 -86844643 + L2 LINE L2 3115 3193 -79 2086 249 62 19 chr5 112785561 112786317 -86843833 - L1ME3A LINE L1 -3 6167 5379 1777 185 0 7 chr5 112787580 112787882 -86842268 + AluJb SINE Alu 1 300 -12 1600 272 106 7 chr5 112788076 112788843 -86841307 - L2 LINE L2 -1 3312 2459 2415 129 3 3 chr5 112789083 112789447 -86840703 - MER47A DNA MER2_type -1 365 2 197 241 0 19 chr5 112789527 112789581 -86840569 - L2 LINE L2 0 3313 3261 231 270 0 16 chr5 112790493 112790556 -86839594 + (CA)n Simple_repeat Simple_repeat 1 62 0 591 228 66 0 chr5 112790576 112790712 -86839438 + MER69 DNA AcHobo 1 145 -2381 361 187 13 13 chr5 112790713 112790788 -86839362 + MER69 DNA AcHobo 2452 2526 0 208 302 19 0 chr5 112790860 112790913 -86839237 - MER5B DNA MER1_type -124 54 1 707 239 105 33 chr5 112791936 112792326 -86837824 - HAL1b LINE L1 -217 1131 714 312 254 81 60 chr5 112792567 112792752 -86837398 - HAL1b LINE L1 -915 433 245 276 139 0 0 chr5 112793602 112793645 -86836505 - HAL1 LINE L1 -360 2147 2105 12370 127 38 31 chr5 112793656 112795709 -86834441 + Tigger2 DNA MER2_type 440 2506 -212 5568 47 9 6 chr5 112795721 112796417 -86833733 - L1PA7 LINE L1 -49 6105 5408 856 135 20 7 chr5 112796417 112796565 -86833585 + Tigger2 DNA MER2_type 2505 2654 -64 1275 146 42 25 chr5 112796572 112796811 -86833339 + AluJo SINE Alu 14 256 -56 284 216 98 0 chr5 112796823 112796874 -86833276 + Tigger2 DNA MER2_type 2659 2714 -4 23 0 0 0 chr5 112796985 112797008 -86833142 + AT_rich Low_complexity Low_complexity 1 23 0 709 156 28 14 chr5 112797013 112797154 -86832996 + L1PB4 LINE L1 6006 6148 -8 339 221 0 0 chr5 112798457 112798525 -86831625 - MER116 DNA Mariner -11 69 2 500 254 60 115 chr5 112798770 112799336 -86830814 - Charlie8 DNA MER1_type -2140 277 1 480 288 14 34 chr5 112800683 112800829 -86829321 - MIR SINE MIR -101 161 19 405 293 104 47 chr5 112801256 112801680 -86828470 + L2 LINE L2 2229 2676 -638 231 338 0 0 chr5 112802125 112802193 -86827957 + G-rich Low_complexity Low_complexity 5 72 0 505 302 70 19 chr5 112803614 112803829 -86826321 - MIR SINE MIR -9 253 28 361 282 17 8 chr5 112804421 112804538 -86825612 + MARNA DNA Mariner 458 575 -11 5589 24 0 0 chr5 112804673 112805410 -86824740 + L1PA3 LINE L1 5173 5906 -249 561 300 67 51 chr5 112807624 112808234 -86821916 + L1ME3 LINE L1 3998 4617 -1529 375 317 155 14 chr5 112808529 112808819 -86821331 + L1ME3 LINE L1 4748 5078 -1068 785 261 82 0 chr5 112808835 112809030 -86821120 - MIR SINE MIR -1 261 51 21 0 0 0 chr5 112809187 112809208 -86820942 + AT_rich Low_complexity Low_complexity 1 21 0 647 308 39 4 chr5 112809223 112809522 -86820628 + L1ME3 LINE L1 5313 5625 -545 409 239 234 30 chr5 112809547 112809714 -86820436 - MIR SINE MIR -14 248 48 356 316 42 2 chr5 112809739 112809975 -86820175 + L1ME3 LINE L1 5691 5886 -276 233 207 69 52 chr5 112810199 112810257 -86819893 + MIR SINE MIR 20 78 -184 21 0 0 0 chr5 112810429 112810450 -86819700 + AT_rich Low_complexity Low_complexity 1 21 0 215 250 18 0 chr5 112810827 112810883 -86819267 + (ATG)n Simple_repeat Simple_repeat 1 57 0 892 318 79 32 chr5 112811852 112812346 -86817804 + MLT1K LTR MaLR 64 580 -8 219 244 0 0 chr5 112814491 112814536 -86815614 + (CTA)n Simple_repeat Simple_repeat 2 46 0 227 333 69 14 chr5 112816119 112816191 -86813959 + L2 LINE L2 3144 3219 -53 1136 278 125 3 chr5 112816585 112817347 -86812803 + L2 LINE L2 2448 3313 0 1370 160 0 0 chr5 112817581 112817793 -86812357 - AluSq SINE Alu -16 297 86 262 192 19 0 chr5 112820556 112820608 -86809542 + L2 LINE L2 3261 3313 0 755 282 27 24 chr5 112821134 112821432 -86808718 - L2 LINE L2 0 3313 3015 585 174 157 0 chr5 112821442 112821557 -86808593 - FLAM_A SINE Alu 0 133 1 1079 303 50 27 chr5 112822753 112823229 -86806921 + LTR16C LTR ERVL 1 487 -4 255 255 128 21 chr5 112823368 112823462 -86806688 - MIR SINE MIR -8 254 151 * 379 234 85 0 chr5 112823461 112823555 -86806595 + L2 LINE L2 3208 3309 -4 327 248 214 0 chr5 112823555 112823672 -86806478 - MIR SINE MIR -118 144 3 477 316 145 33 chr5 112826898 112827586 -86802564 + L2 LINE L2 2539 3312 -1 1913 130 0 20 chr5 112828178 112828470 -86801680 - AluJb SINE Alu -11 301 16 606 267 13 13 chr5 112828882 112829032 -86801118 - MER5A DNA MER1_type -39 150 1 228 320 52 31 chr5 112829050 112829147 -86801003 + L2 LINE L2 3169 3267 -5 246 62 0 0 chr5 112832332 112832364 -86797786 + (TG)n Simple_repeat Simple_repeat 1 32 0 25 31 0 0 chr5 112833337 112833369 -86796781 + AT_rich Low_complexity Low_complexity 1 32 0 2245 94 3 3 chr5 112884231 112884528 -86745622 - AluSc SINE Alu -12 297 1 493 238 139 17 chr5 112885711 112885883 -86744267 - MIR SINE MIR -13 249 57 796 160 35 47 chr5 112886353 112886513 -86743637 - MER5A DNA MER1_type -7 182 23 2837 146 51 118 chr5 112886513 112887292 -86742858 + LTR8A LTR ERV1 1 727 0 535 250 190 0 chr5 112887301 112887501 -86742649 + MIR SINE MIR 11 248 -14 371 355 233 3 chr5 112888387 112888705 -86741445 + L3 LINE CR1 885 1275 -302 1347 131 34 5 chr5 112888802 112889008 -86741142 - AluJb SINE Alu -100 212 1 297 0 0 0 chr5 112889017 112889050 -86741100 + (TA)n Simple_repeat Simple_repeat 1 33 0 2472 40 40 0 chr5 112889055 112889354 -86740796 - AluY SINE Alu 0 311 1 192 372 83 41 chr5 112889373 112889494 -86740656 - L2 LINE L2 -11 3261 3136 1560 153 0 8 chr5 112891658 112891900 -86738250 - AluJo SINE Alu -68 244 5 180 77 0 0 chr5 112892372 112892398 -86737752 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 400 224 13 70 chr5 112894236 112894392 -86735758 + L1MC5 LINE L1 7761 7907 -54 23 0 0 0 chr5 112894858 112894881 -86735269 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 112895060 112895092 -86735058 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr5 112895812 112895844 -86734306 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 112896252 112896274 -86733876 + AT_rich Low_complexity Low_complexity 1 22 0 36 40 0 0 chr5 112896502 112896552 -86733598 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 112896975 112896996 -86733154 + AT_rich Low_complexity Low_complexity 1 21 0 4615 116 17 16 chr5 112897405 112898162 -86731988 - L1MA4 LINE L1 0 6300 5543 893 276 15 50 chr5 112898841 112899102 -86731048 + MIR SINE MIR 11 262 0 279 0 0 0 chr5 112900494 112900525 -86729625 + (TG)n Simple_repeat Simple_repeat 2 32 0 421 232 28 90 chr5 112901056 112901233 -86728917 - L1MC5 LINE L1 -47 7914 7749 2509 65 0 0 chr5 112901291 112901600 -86728550 - AluY SINE Alu -2 309 1 28 61 0 0 chr5 112902437 112902486 -86727664 + AT_rich Low_complexity Low_complexity 1 49 0 2172 108 0 7 chr5 112902963 112903269 -86726881 + AluSg SINE Alu 1 304 -6 763 214 68 15 chr5 112903339 112903545 -86726605 + L1ME3A LINE L1 5947 6163 -7 28 29 0 0 chr5 112904126 112904161 -86725989 + AT_rich Low_complexity Low_complexity 1 35 0 1884 158 3 0 chr5 112904716 112905019 -86725131 - AluSx SINE Alu -8 304 1 405 292 9 9 chr5 112905122 112905235 -86724915 - MIR SINE MIR -119 143 31 219 342 40 0 chr5 112905385 112905461 -86724689 - MIR SINE MIR -94 114 36 233 344 89 38 chr5 112905541 112905698 -86724452 + MIR SINE MIR 23 187 -75 1520 149 47 40 chr5 112906390 112906711 -86723439 + MER33 DNA MER1_type 1 323 -1 30 83 0 0 chr5 112906930 112907002 -86723148 + AT_rich Low_complexity Low_complexity 1 72 0 253 318 0 0 chr5 112907637 112907703 -86722447 + L2 LINE L2 3242 3307 -6 389 20 20 0 chr5 112907858 112907908 -86722242 + (CA)n Simple_repeat Simple_repeat 2 52 0 258 116 0 0 chr5 112908037 112908080 -86722070 + (CA)n Simple_repeat Simple_repeat 2 44 0 199 282 136 36 chr5 112908101 112908211 -86721939 + L2 LINE L2 3193 3313 0 399 252 48 0 chr5 112908446 112908549 -86721601 + MIR SINE MIR 72 179 -83 204 125 0 0 chr5 112909581 112909613 -86720537 + (TA)n Simple_repeat Simple_repeat 1 32 0 24 53 0 0 chr5 112909834 112909872 -86720278 + AT_rich Low_complexity Low_complexity 1 38 0 2246 113 0 0 chr5 112909898 112910207 -86719943 - AluY SINE Alu -2 309 1 1988 105 7 34 chr5 112910435 112910730 -86719420 - AluSx SINE Alu -23 289 3 420 202 0 0 chr5 112910812 112910901 -86719249 + L1MEd LINE L1 49 137 -5982 * 1688 224 33 65 chr5 112910885 112911463 -86718687 + L1MB8 LINE L1 5593 6151 -27 1181 297 66 52 chr5 112911590 112912630 -86717520 + L1MEd LINE L1 445 1545 -4765 25 31 0 0 chr5 112914609 112914641 -86715509 + AT_rich Low_complexity Low_complexity 1 32 0 332 292 73 0 chr5 112914766 112914903 -86715247 - L2 LINE L2 -773 2541 2395 444 93 0 0 chr5 112917643 112917718 -86712432 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 643 221 171 66 chr5 112919019 112919399 -86710751 + L1MC5 LINE L1 6728 7147 -814 2019 135 14 0 chr5 112919936 112920065 -86710085 + AluSx SINE Alu 1 127 -185 225 0 0 0 chr5 112920065 112920090 -86710060 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 2019 135 14 0 chr5 112920090 112920257 -86709893 + AluSx SINE Alu 127 301 -11 283 214 61 61 chr5 112920538 112920636 -86709514 + MIR SINE MIR 95 192 -70 214 250 33 0 chr5 112921088 112921148 -86709002 + MIR SINE MIR 103 164 -98 2410 76 7 0 chr5 112921148 112921450 -86708700 + AluSp SINE Alu 1 304 -9 563 323 88 23 chr5 112922138 112922398 -86707752 - L3 LINE CR1 -2 1575 1299 2105 138 36 33 chr5 112923139 112923502 -86706648 - THE1B LTR MaLR 0 364 1 203 264 0 0 chr5 112924418 112924471 -86705679 + L2 LINE L2 3257 3309 -4 2240 122 3 0 chr5 112925174 112925486 -86704664 - AluSq SINE Alu 0 313 1 461 316 133 4 chr5 112925871 112926096 -86704054 - MIR SINE MIR -1 261 8 620 267 29 23 chr5 112927206 112927378 -86702772 - MER5B DNA MER1_type -5 173 1 304 256 120 24 chr5 112927583 112927708 -86702442 - MIR SINE MIR -95 167 31 187 152 43 0 chr5 112928028 112928074 -86702076 + (CATA)n Simple_repeat Simple_repeat 2 49 0 26 30 0 0 chr5 112928337 112928370 -86701780 + AT_rich Low_complexity Low_complexity 1 33 0 251 268 0 0 chr5 112929074 112929130 -86701020 + (TG)n Simple_repeat Simple_repeat 1 56 0 24 0 0 0 chr5 112929175 112929199 -86700951 + AT_rich Low_complexity Low_complexity 1 24 0 40 21 0 0 chr5 112929694 112929741 -86700409 + AT_rich Low_complexity Low_complexity 1 47 0 24 53 0 0 chr5 112930749 112930787 -86699363 + AT_rich Low_complexity Low_complexity 1 38 0 513 104 0 0 chr5 112934083 112934160 -86695990 + (CA)n Simple_repeat Simple_repeat 2 78 0 247 158 0 0 chr5 112934526 112934564 -86695586 - U2 snRNA snRNA -150 38 1 219 240 173 0 chr5 112940296 112940371 -86689779 + MIR SINE MIR 102 189 -73 205 271 240 0 chr5 112940394 112940490 -86689660 - L2 LINE L2 -1 3271 3153 287 209 45 30 chr5 112940661 112940728 -86689422 + MIR SINE MIR 195 262 0 1287 221 132 39 chr5 112940770 112941232 -86688918 + MLT1D LTR MaLR 1 505 0 289 191 71 36 chr5 112941510 112941594 -86688556 - L1MC4 LINE L1 -31 8011 7925 205 269 0 0 chr5 112941598 112941650 -86688500 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 337 268 92 0 chr5 112941792 112941934 -86688216 - L1ME2 LINE L1 -38 6126 5972 749 222 32 34 chr5 112941985 112942217 -86687933 - L1ME2 LINE L1 -550 5614 5448 2398 92 0 0 chr5 112943766 112944071 -86686079 - AluSp SINE Alu -8 305 1 271 325 0 68 chr5 112944801 112944918 -86685232 + MER102b DNA MER1_type 232 340 -1 526 245 205 15 chr5 112946018 112946218 -86683932 + MIR SINE MIR 25 262 0 1097 272 54 42 chr5 112946246 112946923 -86683227 + L1MC5 LINE L1 7271 7913 -48 26 64 0 0 chr5 112947406 112947453 -86682697 + AT_rich Low_complexity Low_complexity 1 47 0 26 0 0 0 chr5 112947640 112947666 -86682484 + AT_rich Low_complexity Low_complexity 1 26 0 402 322 92 6 chr5 112949346 112949520 -86680630 + MIR SINE MIR 24 212 -50 1833 166 0 3 chr5 112949806 112950122 -86680028 - AluJo SINE Alu 0 315 1 269 286 42 8 chr5 112950167 112950286 -86679864 - L1MC4 LINE L1 -1 8041 7919 1951 103 32 0 chr5 112950317 112950598 -86679552 - AluSp SINE Alu -23 290 1 10336 211 63 16 chr5 112950604 112953564 -86676586 - L1MD1 LINE L1 0 6636 3393 2034 109 0 7 chr5 112953564 112953878 -86676272 + AluSg SINE Alu 1 312 0 10336 211 63 16 chr5 112953878 112955417 -86674733 - L1MD1 LINE L1 -3243 3393 1928 17420 158 14 25 chr5 112955421 112956652 -86673498 + L1PA8 LINE L1 4 1247 -5214 207 69 0 0 chr5 112956652 112956681 -86673469 + (CAA)n Simple_repeat Simple_repeat 1 29 0 17420 158 14 25 chr5 112956681 112957554 -86672596 + L1PA8 LINE L1 1247 2128 -4333 1725 118 86 25 chr5 112957554 112957833 -86672317 - AluSq SINE Alu -17 296 1 17420 158 14 25 chr5 112957833 112960098 -86670052 + L1PA8 LINE L1 2128 4406 -2055 989 127 0 0 chr5 112960099 112960233 -86669917 + AluY SINE Alu 1 134 -177 2361 83 0 10 chr5 112960233 112960547 -86669603 + AluY SINE Alu 1 311 0 8195 116 47 75 chr5 112960552 112962660 -86667490 + L1PA8 LINE L1 4395 6487 0 407 209 0 22 chr5 112962661 112962752 -86667398 - L1MD1 LINE L1 -4602 1938 1850 * 2663 229 48 39 chr5 112962745 112963410 -86666740 - L1MD1 LINE L1 -5853 687 17 24 53 0 0 chr5 112963555 112963593 -86666557 + AT_rich Low_complexity Low_complexity 1 38 0 330 26 0 0 chr5 112963686 112963725 -86666425 + (A)n Simple_repeat Simple_repeat 1 39 0 2468 77 0 3 chr5 112963732 112964044 -86666106 + AluY SINE Alu 1 311 0 23 0 0 0 chr5 112964315 112964338 -86665812 + AT_rich Low_complexity Low_complexity 1 23 0 295 274 123 9 chr5 112966297 112966403 -86663747 - MIR SINE MIR -59 203 86 376 62 62 25 chr5 112966795 112966876 -86663274 + CT-rich Low_complexity Low_complexity 4 87 0 1351 138 5 5 chr5 112966878 112967088 -86663062 - AluSg/x SINE Alu 0 310 101 263 288 39 44 chr5 112967721 112967840 -86662310 - MIR3 SINE MIR -16 192 69 403 224 12 31 chr5 112968325 112968486 -86661664 + (TA)n Simple_repeat Simple_repeat 2 159 0 198 118 0 0 chr5 112968571 112968605 -86661545 + (TA)n Simple_repeat Simple_repeat 2 35 0 2202 121 3 0 chr5 112969412 112969710 -86660440 + AluSp SINE Alu 3 301 -12 22 56 0 0 chr5 112969970 112970006 -86660144 + AT_rich Low_complexity Low_complexity 1 36 0 38 22 0 0 chr5 112973323 112973368 -86656782 + AT_rich Low_complexity Low_complexity 1 45 0 256 133 33 17 chr5 112973538 112973598 -86656552 + (TATG)n Simple_repeat Simple_repeat 2 62 0 226 234 78 0 chr5 112973771 112973835 -86656315 - L1ME LINE L1 -485 5636 5568 34 0 0 0 chr5 112974846 112974880 -86655270 + AT_rich Low_complexity Low_complexity 1 34 0 445 238 115 0 chr5 112975912 112976034 -86654116 + MER69 DNA AcHobo 36 171 -2355 277 211 67 58 chr5 112976034 112976138 -86654012 + MER69 DNA AcHobo 2421 2525 -1 2272 80 0 46 chr5 112976826 112977151 -86652999 - AluY SINE Alu -1 310 1 204 97 0 0 chr5 112977458 112977489 -86652661 + (CA)n Simple_repeat Simple_repeat 1 31 0 362 298 0 19 chr5 112979946 112980050 -86650100 + CT-rich Low_complexity Low_complexity 6 107 0 2290 77 0 17 chr5 112980828 112981126 -86649024 + AluY SINE Alu 14 306 -5 1637 142 23 0 chr5 112982124 112982384 -86647766 + MSTB LTR MaLR 161 426 0 860 113 161 0 chr5 112982384 112982552 -86647598 + LTR49 LTR ERV1 303 497 -98 293 111 0 19 chr5 112982556 112982610 -86647540 + LTR49-int LTR ERV1 1281 1333 -4998 5506 178 25 72 chr5 112982612 112983874 -86646276 + LTR49-int LTR ERV1 1504 2129 -2886 2325 81 3 3 chr5 112983874 112984170 -86645980 - AluSq SINE Alu -17 296 1 5506 178 25 72 chr5 112984170 112984949 -86645201 + LTR49-int LTR ERV1 2129 2943 -2072 1199 222 78 26 chr5 112984949 112985255 -86644895 + LTR49 LTR ERV1 1 322 -273 7158 116 63 30 chr5 112985259 112985775 -86644375 + LTR49-int LTR ERV1 5070 5568 -763 1880 180 3 0 chr5 112985775 112986086 -86644064 + AluJb SINE Alu 1 312 0 7158 116 63 30 chr5 112986086 112986791 -86643359 + LTR49-int LTR ERV1 5568 6331 0 3121 114 43 18 chr5 112986791 112987299 -86642851 + LTR49 LTR ERV1 1 521 -74 404 235 35 0 chr5 112987319 112987404 -86642746 - AluJ SINE Alu -30 282 195 844 120 23 30 chr5 112987404 112987537 -86642613 - AluJ SINE Alu -175 137 6 353 179 9 17 chr5 112987552 112987630 -86642520 + LTR49 LTR ERV1 510 622 0 5250 142 30 16 chr5 112988863 112989750 -86640400 - MER4D LTR ERV1 0 903 4 2479 56 0 7 chr5 112989833 112990137 -86640013 + AluY SINE Alu 1 302 -9 234 283 106 62 chr5 112990426 112990539 -86639611 + MIR SINE MIR 8 125 -137 638 262 173 9 chr5 112990650 112990864 -86639286 + MIR SINE MIR 13 261 -1 22 56 0 0 chr5 112991093 112991129 -86639021 + AT_rich Low_complexity Low_complexity 1 36 0 315 0 0 0 chr5 112991612 112991647 -86638503 + (CA)n Simple_repeat Simple_repeat 2 36 0 1553 199 3 30 chr5 112991798 112992099 -86638051 - AluJb SINE Alu -18 294 2 2604 167 37 115 chr5 112993971 112994045 -86636105 + MER39 LTR ERV1 2 80 -627 1531 173 48 7 chr5 112994045 112994317 -86635833 + AluJb SINE Alu 1 283 -29 2604 167 37 115 chr5 112994317 112994953 -86635197 + MER39 LTR ERV1 80 650 -57 2142 117 0 7 chr5 112994953 112995253 -86634897 - AluSx SINE Alu -14 298 1 2604 167 37 115 chr5 112995253 112995306 -86634844 + MER39 LTR ERV1 650 706 -1 513 310 80 13 chr5 112995805 112996031 -86634119 + LTR16A LTR ERVL 202 442 -8 817 316 46 113 chr5 112996643 112996840 -86633310 + L2 LINE L2 1861 2069 -1203 2038 120 0 0 chr5 112996840 112997123 -86633027 + AluY SINE Alu 29 311 0 817 316 46 113 chr5 112997123 112998190 -86631960 + L2 LINE L2 2069 3270 -2 1899 171 0 3 chr5 112998221 112998530 -86631620 - AluJb SINE Alu -4 308 1 1444 217 21 21 chr5 112998864 112999201 -86630949 - MER58B DNA MER1_type -1 340 4 1411 151 37 70 chr5 113000718 113001016 -86629134 - AluJb SINE Alu -23 289 2 1823 144 52 33 chr5 113005395 113005763 -86624387 + THE1C LTR MaLR 1 375 0 404 296 75 93 chr5 113005857 113005910 -86624240 + L2 LINE L2 2986 3038 -275 2103 106 17 0 chr5 113005910 113006203 -86623947 + AluSg SINE Alu 1 298 -12 404 296 75 93 chr5 113006203 113006483 -86623667 + L2 LINE L2 3038 3313 0 625 198 0 0 chr5 113006676 113006792 -86623358 + AluJb SINE Alu 189 304 -8 2541 66 0 0 chr5 113006868 113007172 -86622978 + AluY SINE Alu 2 305 -6 2918 123 40 55 chr5 113007684 113008231 -86621919 - MER34 LTR ERV1 0 542 4 640 208 50 32 chr5 113008694 113008915 -86621235 - L1MC5 LINE L1 -29 7932 7708 266 330 64 18 chr5 113010822 113010931 -86619219 + MIR SINE MIR 37 150 -112 22 0 0 0 chr5 113011227 113011249 -86618901 + AT_rich Low_complexity Low_complexity 1 22 0 2200 97 0 3 chr5 113012433 113012741 -86617409 - AluSq SINE Alu 0 307 1 2240 81 0 3 chr5 113013236 113013545 -86616605 - AluY SINE Alu 0 308 1 378 286 56 32 chr5 113014401 113014527 -86615623 - MIR SINE MIR -63 145 17 3188 161 41 65 chr5 113014641 113015369 -86614781 + L1MB7 LINE L1 5472 6182 -2 2085 95 0 0 chr5 113015472 113015736 -86614414 - AluSx SINE Alu -14 298 35 2506 77 0 0 chr5 113015929 113016240 -86613910 + AluY SINE Alu 1 311 0 737 306 95 27 chr5 113016253 113016745 -86613405 + L2 LINE L2 2722 3264 -49 2404 69 7 3 chr5 113017175 113017481 -86612669 - AluSp SINE Alu -6 307 1 1298 216 58 61 chr5 113017583 113018085 -86612065 + MER39 LTR ERV1 1 585 0 251 140 20 0 chr5 113019608 113019658 -86610492 + A-rich Low_complexity Low_complexity 4 54 0 194 342 25 13 chr5 113020135 113020214 -86609936 + L2 LINE L2 3189 3268 -4 2322 276 60 21 chr5 113020316 113021188 -86608962 + L1MEc LINE L1 138 1043 -5353 231 306 52 52 chr5 113021557 113021691 -86608459 + MIR SINE MIR 17 150 -58 221 216 0 20 chr5 113021810 113021861 -86608289 + (TA)n Simple_repeat Simple_repeat 2 51 0 31 26 0 0 chr5 113023755 113023793 -86606357 + AT_rich Low_complexity Low_complexity 1 38 0 373 326 59 5 chr5 113023902 113024089 -86606061 - Charlie8 DNA MER1_type -2147 270 74 240 324 9 19 chr5 113024251 113024356 -86605794 - MIR SINE MIR -98 164 61 2150 84 0 35 chr5 113024769 113025086 -86605064 + AluSc SINE Alu 7 313 0 26 30 0 0 chr5 113025912 113025945 -86604205 + AT_rich Low_complexity Low_complexity 1 33 0 548 347 114 26 chr5 113026547 113027375 -86602775 + L2 LINE L2 2142 3051 -221 22 0 0 0 chr5 113027534 113027556 -86602594 + AT_rich Low_complexity Low_complexity 1 22 0 1364 173 0 8 chr5 113028955 113029192 -86600958 + AluJo SINE Alu 1 235 -77 366 157 118 98 chr5 113029195 113029297 -86600853 + L2 LINE L2 3210 3313 0 2125 131 0 0 chr5 113029454 113029752 -86600398 + AluSc SINE Alu 1 298 -11 2312 65 7 3 chr5 113029970 113030263 -86599887 - AluY SINE Alu -17 294 1 229 226 32 48 chr5 113030486 113030548 -86599602 - MIR SINE MIR -4 258 198 21 57 0 0 chr5 113030549 113030584 -86599566 + AT_rich Low_complexity Low_complexity 1 35 0 768 273 54 5 chr5 113030587 113030792 -86599358 - MIR SINE MIR -45 217 3 388 336 36 0 chr5 113032693 113032833 -86597317 + MIR3 SINE MIR 12 156 -52 717 105 0 0 chr5 113033613 113033718 -86596432 + L1MA3 LINE L1 6199 6303 -2 393 39 0 0 chr5 113035022 113035073 -86595077 + (TC)n Simple_repeat Simple_repeat 2 52 0 222 118 0 0 chr5 113035072 113035106 -86595044 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 202 227 11 57 chr5 113035246 113035334 -86594816 + A-rich Low_complexity Low_complexity 2 85 0 1953 157 0 0 chr5 113036374 113036673 -86593477 + AluSx SINE Alu 3 301 -11 22 0 0 0 chr5 113038183 113038205 -86591945 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr5 113038541 113038579 -86591571 + AT_rich Low_complexity Low_complexity 1 38 0 21 57 0 0 chr5 113040100 113040135 -86590015 + AT_rich Low_complexity Low_complexity 1 35 0 2422 68 3 0 chr5 113040393 113040689 -86589461 - AluSp SINE Alu -16 297 1 187 244 200 9 chr5 113041186 113041301 -86588849 + L2 LINE L2 2183 2319 -995 242 330 0 28 chr5 113042026 113042135 -86588015 + GA-rich Low_complexity Low_complexity 1 106 0 309 346 254 11 chr5 113042138 113042323 -86587827 + MIR SINE MIR 20 249 -13 22 0 0 0 chr5 113042360 113042382 -86587768 + AT_rich Low_complexity Low_complexity 1 22 0 266 309 32 81 chr5 113047073 113047196 -86582954 - L2 LINE L2 -2 3270 3154 227 331 94 25 chr5 113047865 113048025 -86582125 + L2 LINE L2 1167 1337 -1977 1759 163 14 0 chr5 113048462 113048757 -86581393 - AluJb SINE Alu -12 300 2 201 327 61 56 chr5 113049496 113049710 -86580440 + L2 LINE L2 2845 3059 -213 248 342 112 7 chr5 113049801 113049953 -86580197 + L2 LINE L2 3100 3267 -5 275 341 35 92 chr5 113050203 113050517 -86579633 + L2 LINE L2 2945 3240 -32 1619 174 0 77 chr5 113051141 113051263 -86578887 + MER1B DNA MER1_type 38 168 -2544 1026 61 0 0 chr5 113051263 113051431 -86578719 + L1PA7 LINE L1 6006 6173 0 1619 174 0 77 chr5 113051431 113051634 -86578516 + MER1B DNA MER1_type 168 339 0 372 43 0 0 chr5 113051773 113051819 -86578331 + (CA)n Simple_repeat Simple_repeat 1 46 0 225 0 0 0 chr5 113052164 113052189 -86577961 + (A)n Simple_repeat Simple_repeat 1 25 0 25 65 0 0 chr5 113052884 113052930 -86577220 + AT_rich Low_complexity Low_complexity 1 46 0 330 26 0 0 chr5 113054257 113054296 -86575854 + (TAA)n Simple_repeat Simple_repeat 2 40 0 2259 68 0 45 chr5 113054381 113054689 -86575461 + AluY SINE Alu 1 294 -17 1608 215 54 9 chr5 113055295 113055644 -86574506 - MLT1A1 LTR MaLR 0 365 1 787 148 0 22 chr5 113055845 113055980 -86574170 + FLAM_C SINE Alu 1 132 -1 290 307 77 33 chr5 113055980 113056538 -86573612 + L1MEd LINE L1 1070 1688 -4622 1390 159 5 0 chr5 113056769 113056989 -86573161 + MER93b LTR ERV1 153 373 0 289 188 0 25 chr5 113056989 113057069 -86573081 + L1ME3A LINE L1 5875 5952 -218 190 276 126 35 chr5 113057470 113057557 -86572593 - MIR SINE MIR -157 105 11 22 0 0 0 chr5 113057733 113057755 -86572395 + AT_rich Low_complexity Low_complexity 1 22 0 787 260 34 8 chr5 113058408 113058673 -86571477 - L1MC4 LINE L1 -17 8025 7754 1302 199 0 0 chr5 113058718 113058944 -86571206 - AluJb SINE Alu -86 226 1 1175 237 101 26 chr5 113058974 113059362 -86570788 - L1MC4 LINE L1 -368 7674 7258 534 148 78 0 chr5 113060589 113060704 -86569446 + MER96B DNA MER1_type? 44 167 -250 480 105 88 88 chr5 113061219 113061306 -86568844 + MER53 DNA DNA 76 165 -24 2558 91 17 17 chr5 113061306 113061668 -86568482 + THE1B LTR MaLR 3 364 0 480 105 88 88 chr5 113061668 113061694 -86568456 + MER53 DNA DNA 164 189 0 2392 67 14 0 chr5 113062752 113063049 -86567101 + AluSp SINE Alu 2 302 -11 279 0 0 0 chr5 113063049 113063058 -86567092 + (CA)n Simple_repeat Simple_repeat 1 40 0 279 0 0 0 chr5 113063058 113063089 -86567061 + (CA)n Simple_repeat Simple_repeat 2 32 0 2310 92 0 0 chr5 113063632 113063927 -86566223 + AluSg SINE Alu 1 295 -15 253 303 15 0 chr5 113064625 113064691 -86565459 + L2 LINE L2 3230 3296 -17 24 77 0 0 chr5 113065135 113065187 -86564963 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 113065632 113065653 -86564497 + AT_rich Low_complexity Low_complexity 1 21 0 422 304 91 78 chr5 113066417 113066868 -86563282 + L1M4 LINE L1 4123 4579 -1567 354 23 0 0 chr5 113066892 113066935 -86563215 + (TG)n Simple_repeat Simple_repeat 1 43 0 1732 188 34 11 chr5 113067761 113068118 -86562032 + MLT1A1 LTR MaLR 1 365 0 435 19 0 0 chr5 113069560 113069612 -86560538 + (CATA)n Simple_repeat Simple_repeat 2 53 0 1942 116 3 14 chr5 113069615 113069924 -86560226 + AluSx SINE Alu 1 306 0 234 337 137 0 chr5 113070539 113070634 -86559516 + L2 LINE L2 3192 3299 -14 1690 154 51 20 chr5 113070635 113070927 -86559223 + AluJo SINE Alu 1 301 -11 589 269 80 0 chr5 113071091 113071266 -86558884 + MIR SINE MIR 74 262 0 213 320 67 0 chr5 113071329 113071404 -86558746 + L2 LINE L2 3156 3235 -37 2438 80 0 3 chr5 113071809 113072121 -86558029 - AluY SINE Alu 0 311 1 1032 245 36 4 chr5 113073042 113073291 -86556859 - MIR SINE MIR -4 258 2 363 301 20 0 chr5 113073440 113073593 -86556557 + L1ME LINE L1 5628 5783 -338 281 338 22 36 chr5 113074033 113074172 -86555978 + MIR3 SINE MIR 63 199 -9 23 54 0 0 chr5 113075342 113075379 -86554771 + AT_rich Low_complexity Low_complexity 1 37 0 2178 124 0 3 chr5 113078955 113079253 -86550897 - AluSx SINE Alu -14 298 2 24 0 0 0 chr5 113079454 113079478 -86550672 + AT_rich Low_complexity Low_complexity 1 24 0 25 31 0 0 chr5 113079601 113079633 -86550517 + AT_rich Low_complexity Low_complexity 1 32 0 666 268 33 11 chr5 113079771 113079954 -86550196 + MIR SINE MIR 28 214 -48 1291 260 42 62 chr5 113079999 113080180 -86549970 - MLT1H LTR MaLR -1 548 365 2168 95 59 39 chr5 113080180 113080537 -86549613 + THE1B LTR MaLR 1 364 0 1291 260 42 62 chr5 113080537 113080852 -86549298 - MLT1H LTR MaLR -184 365 62 2254 104 3 3 chr5 113081212 113081521 -86548629 - AluSq SINE Alu -4 309 1 1255 46 0 0 chr5 113081677 113081829 -86548321 + L1PA3 LINE L1 6001 6152 -3 180 0 0 0 chr5 113083169 113083189 -86546961 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr5 113085906 113085934 -86544216 + AT_rich Low_complexity Low_complexity 1 28 0 307 286 0 0 chr5 113085979 113086042 -86544108 + MER94 DNA DNA 72 134 0 540 258 191 5 chr5 113086085 113086294 -86543856 + MIR SINE MIR 15 262 0 222 37 0 0 chr5 113086329 113086356 -86543794 + (TA)n Simple_repeat Simple_repeat 1 27 0 1692 139 7 71 chr5 113086458 113086768 -86543382 - AluJb SINE Alu -22 290 1 337 257 295 33 chr5 113088000 113088183 -86541967 - L3 LINE CR1 -20 1557 1327 22 0 0 0 chr5 113088237 113088259 -86541891 + AT_rich Low_complexity Low_complexity 1 22 0 662 287 65 15 chr5 113088349 113088610 -86541540 - Charlie8 DNA MER1_type -2141 276 3 2025 133 17 0 chr5 113088651 113088951 -86541199 + AluSx SINE Alu 1 305 -7 22 35 0 0 chr5 113090208 113090237 -86539913 + AT_rich Low_complexity Low_complexity 1 29 0 2319 103 0 7 chr5 113091450 113091760 -86538390 - AluSc SINE Alu -1 308 1 1750 138 21 0 chr5 113092001 113092292 -86537858 - L1PB3 LINE L1 -7 6147 5851 1687 126 12 102 chr5 113092553 113092723 -86537427 + AluSx SINE Alu 1 128 -184 2375 88 0 3 chr5 113092723 113093028 -86537122 - AluY SINE Alu -7 304 1 1687 126 12 102 chr5 113093028 113093191 -86536959 + AluSx SINE Alu 128 304 -8 1787 148 178 6 chr5 113093639 113094004 -86536146 + MSTA LTR MaLR 1 428 0 648 190 52 0 chr5 113094004 113094120 -86536030 + FLAM_A SINE Alu 5 126 -7 2230 102 7 3 chr5 113094912 113095216 -86534934 + AluSc SINE Alu 1 305 -4 1730 248 106 22 chr5 113095761 113096297 -86533853 + MLT1E2 LTR MaLR 18 598 -28 876 203 0 43 chr5 113096347 113096534 -86533616 + MER3 DNA MER1_type 31 209 0 741 230 37 0 chr5 113097546 113097707 -86532443 - MLT1E1 LTR MaLR -61 593 427 510 17 0 0 chr5 113097707 113097766 -86532384 + (GGATG)n Simple_repeat Simple_repeat 5 63 0 343 342 81 12 chr5 113097844 113097947 -86532203 - L2 LINE L2 -2798 516 397 1938 225 133 35 chr5 113097947 113098543 -86531607 + MLT1E1 LTR MaLR 1 654 0 343 342 81 12 chr5 113098543 113098600 -86531550 - L2 LINE L2 -2917 397 345 231 196 0 0 chr5 113098780 113098831 -86531319 + GA-rich Low_complexity Low_complexity 2 52 0 535 135 10 0 chr5 113099762 113099858 -86530292 + L1MB4 LINE L1 6083 6179 -1 1656 106 30 0 chr5 113100996 113101233 -86528917 + AluSg/x SINE Alu 69 312 0 356 278 65 30 chr5 113103167 113103336 -86526814 - MER5B DNA MER1_type -3 175 1 2052 257 81 30 chr5 113103440 113104445 -86525705 - L2 LINE L2 0 3313 2207 27 29 0 0 chr5 113104454 113104488 -86525662 + AT_rich Low_complexity Low_complexity 1 34 0 347 301 46 81 chr5 113104867 113105040 -86525110 + L2 LINE L2 3106 3272 0 603 262 27 21 chr5 113108202 113108389 -86521761 - LTR33A LTR ERVL 0 523 336 340 325 94 31 chr5 113108467 113108658 -86521492 - LTR33A LTR ERVL -194 329 127 23 0 0 0 chr5 113109862 113109885 -86520265 + AT_rich Low_complexity Low_complexity 1 23 0 28 61 0 0 chr5 113109927 113109976 -86520174 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr5 113110068 113110092 -86520058 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr5 113110274 113110295 -86519855 + (A)n Simple_repeat Simple_repeat 1 21 0 22 0 0 0 chr5 113110468 113110490 -86519660 + AT_rich Low_complexity Low_complexity 1 22 0 600 196 0 0 chr5 113110938 113111040 -86519110 - Tigger7 DNA MER2_type -4 2487 2386 1117 206 31 4 chr5 113111041 113111269 -86518881 - Tigger7 DNA MER2_type -2253 234 1 523 173 36 36 chr5 113111657 113111767 -86518383 - MIR SINE MIR -79 183 74 32 0 0 0 chr5 113112554 113112586 -86517564 + AT_rich Low_complexity Low_complexity 1 32 0 1493 169 84 18 chr5 113112620 113112904 -86517246 - AluJo SINE Alu -5 307 5 228 226 16 0 chr5 113113114 113113176 -86516974 - L1ME LINE L1 -249 5872 5810 226 194 65 43 chr5 113113235 113113328 -86516822 - L1MC5 LINE L1 -36 7925 7831 969 236 36 46 chr5 113113336 113113616 -86516534 - AluJo SINE Alu -15 297 21 648 261 110 36 chr5 113113701 113114145 -86516005 - L1MC5 LINE L1 -172 7789 7313 1102 131 0 55 chr5 113114146 113114345 -86515805 - AluSg/x SINE Alu -9 303 116 267 324 19 0 chr5 113114345 113114453 -86515697 - L1MC4a LINE L1 -421 7387 7278 596 253 45 25 chr5 113114517 113114786 -86515364 - L1MC4 LINE L1 -744 7217 6960 1586 273 55 29 chr5 113114796 113115419 -86514731 - L1ME1 LINE L1 -5 6161 5523 1051 96 148 57 chr5 113115447 113115656 -86514494 - MER44D DNA MER2_type -107 502 5 22933 105 13 20 chr5 113115755 113122170 -86507980 - L1PA7 LINE L1 -3 6466 5 621 204 36 63 chr5 113122161 113122396 -86507754 - L1ME1 LINE L1 -663 5503 5263 * 1630 149 81 31 chr5 113122396 113122719 -86507431 + MER44D DNA MER2_type 1 609 0 621 204 36 63 chr5 113122719 113122791 -86507359 - L1ME1 LINE L1 -903 5263 5191 2124 124 0 13 chr5 113122791 113123090 -86507060 - AluSg SINE Alu -15 295 1 621 204 36 63 chr5 113123090 113123191 -86506959 - L1ME1 LINE L1 -975 5191 5032 669 193 0 0 chr5 113123191 113123336 -86506814 - L1MB7 LINE L1 -16 6168 6024 3723 208 39 16 chr5 113123343 113124926 -86505224 - L1MB7 LINE L1 -230 5944 4325 715 110 34 0 chr5 113124958 113125076 -86505074 - L1MA8 LINE L1 -3 6288 6167 2917 121 34 1 chr5 113125076 113125769 -86504381 + LTR25 LTR ERV1 2 781 -13 334 261 100 6 chr5 113125790 113125970 -86504180 - L1MB7 LINE L1 -2795 3351 3155 372 146 34 11 chr5 113125984 113126073 -86504077 - L1MA8 LINE L1 -125 6166 6076 4650 125 25 27 chr5 113126113 113126433 -86503717 - L1MA8 LINE L1 -201 6090 5771 2318 67 40 10 chr5 113126433 113126731 -86503419 - AluY SINE Alu -4 307 1 4650 125 25 27 chr5 113126731 113127336 -86502814 - L1MA8 LINE L1 -520 5771 5165 2157 248 73 31 chr5 113127369 113127828 -86502322 - L1M4 LINE L1 -2295 3851 3413 2218 102 10 16 chr5 113127828 113128131 -86502019 + AluSq SINE Alu 1 301 -12 2157 248 73 31 chr5 113128131 113128610 -86501540 - L1M4 LINE L1 -2733 3413 2873 1280 273 19 13 chr5 113128618 113128992 -86501158 - L1MEc LINE L1 -5985 411 36 320 262 69 21 chr5 113129001 113129146 -86501004 - L1MC4 LINE L1 -966 7076 6925 188 281 31 42 chr5 113129832 113129928 -86500222 - MIR3 SINE MIR -3 205 111 2185 119 7 3 chr5 113131096 113131398 -86498752 - AluSx SINE Alu -9 303 1 219 244 61 61 chr5 113131415 113131497 -86498653 - MIR SINE MIR -2 260 179 504 273 128 22 chr5 113132701 113132928 -86497222 + L2 LINE L2 1583 1833 -1481 318 26 0 0 chr5 113132954 113132993 -86497157 + (CA)n Simple_repeat Simple_repeat 2 40 0 1699 130 0 121 chr5 113133004 113133354 -86496796 - AluSx SINE Alu 0 302 1 1592 173 98 4 chr5 113133366 113133725 -86496425 - L1MB7 LINE L1 -16 6168 5770 2000 176 88 38 chr5 113133725 113134168 -86495982 + MLT1C LTR MaLR 3 467 0 1592 173 98 4 chr5 113134168 113134191 -86495959 - L1MB7 LINE L1 -414 5770 5751 384 250 268 4 chr5 113134241 113134469 -86495681 + L2 LINE L2 1918 2205 -1109 346 256 12 12 chr5 113134617 113134703 -86495447 - MER81 DNA DNA 0 114 29 194 228 140 18 chr5 113134707 113134764 -86495386 + L2 LINE L2 3250 3313 0 1991 214 5 89 chr5 113134985 113135547 -86494603 + MLT2B1 LTR ERVL 5 519 -1 335 248 9 83 chr5 113135562 113135671 -86494479 + MER5A DNA MER1_type 85 185 -4 1012 249 13 9 chr5 113136819 113137052 -86493098 + MIR SINE MIR 28 261 -1 268 202 45 79 chr5 113137331 113137420 -86492730 - MER5B DNA MER1_type -72 106 21 195 263 0 0 chr5 113137438 113137476 -86492674 + MER5A DNA MER1_type 10 47 -142 436 219 38 0 chr5 113137477 113137582 -86492568 - L1PB1 LINE L1 -1537 4609 4501 * 6206 139 1 8 chr5 113137574 113139152 -86490998 + L1PB1 LINE L1 4582 6147 -4 1171 135 5 0 chr5 113139179 113139372 -86490778 + L1PB2 LINE L1 5951 6144 -7 234 311 217 0 chr5 113139380 113139486 -86490664 + MER5A DNA MER1_type 61 189 0 1198 211 38 41 chr5 113139586 113139927 -86490223 - L1ME1 LINE L1 -5 6161 5822 6114 78 10 30 chr5 113139927 113140836 -86489314 + HERVL-A1 LTR ERVL 4764 5654 0 2936 79 67 5 chr5 113140836 113141214 -86488936 + MLT2A1 LTR ERVL 1 409 -35 500 0 17 0 chr5 113141214 113141274 -86488876 + (TA)n Simple_repeat Simple_repeat 1 61 0 2936 79 67 5 chr5 113141274 113141313 -86488837 + MLT2A1 LTR ERVL 409 444 0 1016 214 22 0 chr5 113141315 113141544 -86488606 - L1ME1 LINE L1 -341 5825 5592 541 207 37 7 chr5 113141526 113141818 -86488332 - L1ME1 LINE L1 -798 5348 4895 * 274 327 232 5 chr5 113142746 113142957 -86487193 - MIR SINE MIR 0 262 4 846 268 56 33 chr5 113143892 113144198 -86485952 + L2 LINE L2 2560 2872 -442 277 333 60 0 chr5 113144212 113144296 -86485854 + L2 LINE L2 3184 3272 0 974 148 7 13 chr5 113144533 113144688 -86485462 + AluJb SINE Alu 145 298 -14 2206 112 0 3 chr5 113144690 113144984 -86485166 + AluSx SINE Alu 1 293 -19 230 67 100 0 chr5 113144992 113145052 -86485098 + (CAAA)n Simple_repeat Simple_repeat 3 68 0 272 264 82 55 chr5 113145673 113145783 -86484367 - L2 LINE L2 -5 3267 3155 21 57 0 0 chr5 113146353 113146388 -86483762 + AT_rich Low_complexity Low_complexity 1 35 0 341 297 153 0 chr5 113146783 113146894 -86483256 - L2 LINE L2 -11 3261 3134 1549 181 26 42 chr5 113146961 113147271 -86482879 - AluJb SINE Alu -7 305 1 467 149 0 0 chr5 113147523 113147597 -86482553 - AluJ/FRAM SINE Alu -19 293 220 2241 173 13 0 chr5 113147597 113147995 -86482155 + L1MA5 LINE L1 17 419 -7146 4826 202 30 50 chr5 113197998 113200181 -86429969 + L1MA5 LINE L1 5482 7584 -6 452 298 20 20 chr5 113200888 113201039 -86429111 - L2 LINE L2 -4 3309 3159 1849 198 52 68 chr5 113201089 113201278 -86428872 + L1ME2 LINE L1 5131 5322 -842 1954 114 0 57 chr5 113201278 113201593 -86428557 + AluSx SINE Alu 1 297 -15 1849 198 52 68 chr5 113201593 113202143 -86428007 + L1ME2 LINE L1 5322 5847 -317 254 328 44 33 chr5 113202188 113202368 -86427782 + MLT1K LTR MaLR 371 552 -36 202 348 106 21 chr5 113202823 113202964 -86427186 - MIR SINE MIR -8 254 102 233 267 148 37 chr5 113203822 113203957 -86426193 - MIR SINE MIR -48 214 65 316 181 0 78 chr5 113205658 113205774 -86424376 + (CA)n Simple_repeat Simple_repeat 2 108 0 1402 97 0 15 chr5 113205840 113206035 -86424115 + AluSg/x SINE Alu 100 291 -21 2003 126 3 13 chr5 113207568 113207869 -86422281 - AluSx SINE Alu -2 310 13 216 0 0 0 chr5 113207915 113207939 -86422211 + (A)n Simple_repeat Simple_repeat 1 24 0 240 35 0 0 chr5 113208124 113208153 -86421997 + (TA)n Simple_repeat Simple_repeat 1 29 0 22 56 0 0 chr5 113210319 113210355 -86419795 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 113211297 113211326 -86418824 + AT_rich Low_complexity Low_complexity 1 29 0 29 47 0 0 chr5 113211565 113211608 -86418542 + AT_rich Low_complexity Low_complexity 1 43 0 2217 88 17 3 chr5 113211960 113212254 -86417896 + AluSc SINE Alu 1 298 -11 21 36 0 0 chr5 113213377 113213405 -86416745 + AT_rich Low_complexity Low_complexity 1 28 0 880 117 0 29 chr5 113215269 113215406 -86414744 + FLAM_C SINE Alu 1 133 0 210 319 138 11 chr5 113215796 113215890 -86414260 - L2 LINE L2 -16 3256 3151 350 294 109 1 chr5 113216005 113216209 -86413941 + L1ME2 LINE L1 5643 5866 -298 280 231 46 15 chr5 113217050 113217115 -86413035 + L2 LINE L2 3205 3271 -1 525 233 241 3 chr5 113217604 113217807 -86412343 + MIR SINE MIR 5 248 -14 2004 193 11 3 chr5 113217869 113218231 -86411919 + MLT1A1 LTR MaLR 1 365 0 309 296 62 75 chr5 113218905 113219131 -86411019 - MIR SINE MIR -10 252 30 2359 97 0 13 chr5 113220049 113220359 -86409791 + AluSg SINE Alu 1 306 -4 285 357 60 10 chr5 113221654 113221853 -86408297 - MIR SINE MIR -1 261 53 1608 181 77 9 chr5 113222052 113222378 -86407772 - MER7A DNA MER2_type 0 346 1 1775 192 28 0 chr5 113222484 113222848 -86407302 + L1MB7 LINE L1 5795 6168 -16 1951 142 0 3 chr5 113223814 113224103 -86406047 - AluJo SINE Alu -24 288 1 456 204 253 42 chr5 113224148 113224437 -86405713 + L1ME4a LINE L1 5770 6119 -2 449 286 50 0 chr5 113224563 113224682 -86405468 + L2 LINE L2 3188 3312 -1 692 203 163 23 chr5 113224785 113225086 -86405064 + Charlie4a DNA MER1_type 1 343 -165 949 262 118 12 chr5 113225089 113225421 -86404729 + HAL1 LINE L1 201 567 -1940 * 1564 256 72 11 chr5 113225413 113225941 -86404209 + HAL1 LINE L1 1254 1813 -694 455 222 111 0 chr5 113226186 113226330 -86403820 + HAL1 LINE L1 2127 2286 -221 2334 92 0 0 chr5 113227499 113227804 -86402346 - AluSg SINE Alu -3 307 3 7215 209 55 48 chr5 113228101 113228912 -86401238 + L1MC1 LINE L1 17 821 -5605 1292 199 0 4 chr5 113228912 113229148 -86401002 - MER46A DNA MER2_type -1 235 1 7215 209 55 48 chr5 113229148 113230258 -86399892 + L1MC1 LINE L1 821 2119 -4307 1881 127 33 0 chr5 113230258 113230580 -86399570 - AluSx SINE Alu 0 331 1 7215 209 55 48 chr5 113230580 113231293 -86398857 + L1MC1 LINE L1 2119 2825 -3601 3500 187 35 13 chr5 113231290 113231979 -86398171 + L1MC1 LINE L1 5887 6590 -23 * 2104 250 34 16 chr5 113232156 113232720 -86397430 + L1M4 LINE L1 2301 2882 -3264 569 47 0 47 chr5 113232720 113232806 -86397344 - L1PA6 LINE L1 -3 6151 6070 2104 250 34 16 chr5 113232806 113232948 -86397202 + L1M4 LINE L1 2882 3020 -3126 * 3133 236 42 28 chr5 113232946 113233882 -86396268 - L1M4c LINE L1 -1752 4892 3944 622 161 210 0 chr5 113233884 113234008 -86396142 - FAM SINE Alu -10 175 26 3373 250 53 14 chr5 113234008 113235162 -86394988 - L1M4c LINE L1 -2690 3954 2756 * 4291 190 45 39 chr5 113235156 113236255 -86393895 - L1M4c LINE L1 -4563 2083 978 1370 276 72 84 chr5 113236268 113237153 -86392997 - L1M4c LINE L1 -5666 876 2 21 0 0 0 chr5 113237566 113237587 -86392563 + AT_rich Low_complexity Low_complexity 1 21 0 455 243 61 27 chr5 113238125 113238273 -86391877 - MER112 DNA MER1_type -36 224 72 325 265 12 12 chr5 113240168 113240251 -86389899 + MER21B LTR ERV1 14 96 -767 508 266 79 7 chr5 113240291 113240430 -86389720 + MER21B LTR ERV1 100 248 -615 979 258 49 40 chr5 113240495 113240844 -86389306 + MER21A LTR ERV1 506 857 -74 941 230 58 0 chr5 113241897 113242088 -86388062 - MER63A DNA MER1_type -5 205 4 567 283 12 12 chr5 113242344 113242510 -86387640 + MIR SINE MIR 97 262 0 1409 203 58 6 chr5 113243422 113243781 -86386369 + L1MD3 LINE L1 7526 7903 -92 3517 100 27 96 chr5 113243789 113244509 -86385641 + MER4A LTR ERV1 1 779 0 364 200 0 0 chr5 113244509 113244579 -86385571 + L1MD3 LINE L1 7904 7973 -22 46 54 0 0 chr5 113244591 113244665 -86385485 + AT_rich Low_complexity Low_complexity 1 74 0 2005 164 72 46 chr5 113244856 113245270 -86384880 - MER6A DNA MER2_type -180 425 1 2162 131 0 0 chr5 113245459 113245757 -86384393 + AluSg SINE Alu 1 298 -12 336 323 57 44 chr5 113245783 113246111 -86384039 + L1ME LINE L1 179 752 -5882 389 250 50 30 chr5 113246425 113246525 -86383625 - MER58A DNA MER1_type -2 105 4 979 214 20 30 chr5 113246528 113246823 -86383327 + L1ME LINE L1 1104 1395 -5147 872 107 33 0 chr5 113246823 113246944 -86383206 + LTR55 LTR ERV 1 125 -423 * 1144 216 19 15 chr5 113246941 113247200 -86382950 + LTR55 LTR ERV 282 541 -7 2621 224 88 10 chr5 113247204 113248120 -86382030 + L1ME LINE L1 1391 2463 -4183 29 28 0 0 chr5 113248127 113248163 -86381987 + AT_rich Low_complexity Low_complexity 1 36 0 400 168 29 0 chr5 113248221 113248394 -86381756 + (TA)n Simple_repeat Simple_repeat 2 179 0 1302 222 86 61 chr5 113248441 113248629 -86381521 + L1ME LINE L1 2491 2673 -3971 1840 163 0 10 chr5 113248629 113248923 -86381227 + AluJb SINE Alu 1 291 -21 1302 222 86 61 chr5 113248923 113249386 -86380764 + L1ME LINE L1 2673 3123 -3521 1820 166 0 13 chr5 113249386 113249693 -86380457 + AluJb SINE Alu 1 303 -9 1302 222 86 61 chr5 113249693 113250066 -86380084 + L1ME LINE L1 3123 3716 -2928 1381 155 24 84 chr5 113250068 113250364 -86379786 + AluJo SINE Alu 1 278 -34 252 0 0 0 chr5 113250364 113250392 -86379758 + (CA)n Simple_repeat Simple_repeat 1 28 0 3535 221 77 19 chr5 113250402 113251500 -86378650 + L1ME LINE L1 3747 4908 -1736 1059 220 34 11 chr5 113251501 113251769 -86378381 - L1M4b LINE L1 -5238 1621 1348 828 109 219 0 chr5 113251780 113251917 -86378233 - AluSc SINE Alu -8 301 135 313 256 110 46 chr5 113252473 113252722 -86377428 - L1M4b LINE L1 -6257 598 21 252 77 0 0 chr5 113253318 113253357 -86376793 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 282 231 55 33 chr5 113253488 113253579 -86376571 - L3 LINE CR1 -293 1284 1192 340 248 18 46 chr5 113253729 113253838 -86376312 - L2 LINE L2 0 3313 3208 209 292 0 28 chr5 113254995 113255067 -86375083 + MIR SINE MIR 54 123 -85 * 223 325 0 12 chr5 113255062 113255142 -86375008 + L2 LINE L2 3145 3223 -49 370 328 40 0 chr5 113255147 113255272 -86374878 + MIR SINE MIR 120 249 -13 358 283 110 102 chr5 113255840 113256003 -86374147 - L1M2 LINE L1 -5702 1147 987 300 70 0 0 chr5 113256003 113256046 -86374104 + (CCG)n Simple_repeat Simple_repeat 3 45 0 358 283 110 102 chr5 113256046 113256293 -86373857 - L1M2 LINE L1 -5862 987 744 222 37 0 0 chr5 113256293 113256320 -86373830 + (CGG)n Simple_repeat Simple_repeat 2 28 0 358 283 110 102 chr5 113256320 113256642 -86373508 - L1M2 LINE L1 -6105 744 408 529 235 134 13 chr5 113258797 113258946 -86371204 + FAM SINE Alu 1 167 -8 1150 192 90 0 chr5 113258960 113259215 -86370935 + L1ME2 LINE L1 5587 5864 -300 200 279 38 38 chr5 113259334 113259413 -86370737 - MIR3 SINE MIR -45 163 85 2214 214 61 35 chr5 113259873 113260466 -86369684 + MER90 LTR ERV1 7 614 0 347 206 240 14 chr5 113260485 113260631 -86369519 + L2 LINE L2 3054 3232 -81 2161 138 3 0 chr5 113260751 113261063 -86369087 + AluSq SINE Alu 1 313 0 198 287 17 70 chr5 113261790 113261905 -86368245 + L2 LINE L2 2955 3063 -250 1457 171 0 30 chr5 113262065 113262328 -86367822 + AluJb SINE Alu 36 290 -22 1753 191 24 80 chr5 113262342 113262408 -86367742 + MLT1E1 LTR MaLR 206 274 -380 1896 106 50 30 chr5 113262408 113262710 -86367440 + AluSx SINE Alu 1 308 -4 1753 191 24 80 chr5 113262710 113263093 -86367057 + MLT1E1 LTR MaLR 274 630 -24 2222 124 16 0 chr5 113263549 113263856 -86366294 - AluSx SINE Alu 0 312 1 2174 105 3 0 chr5 113263897 113264191 -86365959 - AluSp SINE Alu -18 295 1 1721 182 17 7 chr5 113265024 113265315 -86364835 - AluJb SINE Alu -18 294 1 273 29 0 0 chr5 113265548 113265582 -86364568 + (GA)n Simple_repeat Simple_repeat 2 35 0 * 303 28 0 0 chr5 113265581 113265617 -86364533 + (TG)n Simple_repeat Simple_repeat 2 37 0 590 212 35 7 chr5 113266861 113267014 -86363136 + L1ME2 LINE L1 5369 5528 -638 479 211 11 0 chr5 113267014 113267104 -86363046 - AluJ/FLAM SINE Alu -221 91 1 1506 252 132 25 chr5 113267107 113267675 -86362475 + L1ME2 LINE L1 5527 6155 -9 426 271 77 59 chr5 113267718 113268057 -86362093 + L1MC4 LINE L1 7558 7902 -140 2120 156 48 37 chr5 113268085 113268620 -86361530 - MLT2A2 LTR ERVL 0 554 1 227 253 69 0 chr5 113268758 113268845 -86361305 - L1 LINE L1 -1331 4815 4723 1632 196 27 3 chr5 113269001 113269297 -86360853 - AluJb SINE Alu -9 303 1 847 143 0 8 chr5 113269541 113269674 -86360476 + FLAM_C SINE Alu 2 133 0 259 330 37 11 chr5 113270059 113270247 -86359903 - L1 LINE L1 -2235 3911 3719 1185 190 166 8 chr5 113270452 113270705 -86359445 - AluSg SINE Alu -7 293 1 479 281 85 36 chr5 113270809 113271312 -86358838 + L1MC/D LINE L1 5266 5780 -633 464 254 65 6 chr5 113271788 113271957 -86358193 + MARNA DNA Mariner 291 469 -117 369 0 0 0 chr5 113272022 113272063 -86358087 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2295 75 0 3 chr5 113272065 113272347 -86357803 - AluY SINE Alu -30 281 1 1871 128 4 14 chr5 113272487 113272796 -86357354 - AluSc SINE Alu 0 306 1 278 235 173 12 chr5 113272959 113273040 -86357110 + L2 LINE L2 3148 3241 -31 389 236 71 52 chr5 113273125 113273392 -86356758 - LTR37A LTR ERV1 0 426 155 14448 115 21 32 chr5 113273472 113276115 -86354035 + L1PA7 LINE L1 5 2689 -3772 3741 94 4 4 chr5 113276115 113276626 -86353524 - MER9 LTR ERVK 0 511 1 14448 115 21 32 chr5 113276626 113277449 -86352701 + L1PA7 LINE L1 2689 3520 -2941 441 0 0 0 chr5 113277451 113277500 -86352650 + (TTA)n Simple_repeat Simple_repeat 3 51 0 2152 56 0 0 chr5 113277500 113277768 -86352382 - L1PA6 LINE L1 -18 6136 5869 1329 58 0 0 chr5 113277768 113277959 -86352191 - L1PA7 LINE L1 -2745 3716 3526 14188 80 6 0 chr5 113277959 113280695 -86349455 + L1PA7 LINE L1 3704 6469 0 744 228 90 39 chr5 113280870 113281245 -86348905 + MER39 LTR ERV1 126 707 0 247 174 0 0 chr5 113281316 113281362 -86348788 + MER58 DNA MER1_type 2363 2408 -12 1247 252 58 89 chr5 113281465 113282255 -86347895 - MER31-int LTR ERV1 -844 4092 3327 1379 177 101 11 chr5 113282542 113282819 -86347331 + AluJo SINE Alu 1 302 -10 391 259 23 87 chr5 113282860 113283126 -86347024 - MER31-int LTR ERV1 -1870 3066 2818 21 0 0 0 chr5 113283164 113283185 -86346965 + AT_rich Low_complexity Low_complexity 1 21 0 320 256 0 66 chr5 113283189 113283326 -86346824 - MER31-int LTR ERV1 -2145 2791 2664 1116 213 87 0 chr5 113283706 113283983 -86346167 + Charlie1b DNA MER1_type 14 314 -209 1908 148 20 3 chr5 113283983 113284280 -86345870 + AluJo SINE Alu 1 302 -10 293 210 109 17 chr5 113284958 113285077 -86345073 + LTR48 LTR ERV1 608 737 -50 180 0 0 0 chr5 113285734 113285754 -86344396 + (A)n Simple_repeat Simple_repeat 1 20 0 430 244 93 62 chr5 113285889 113286147 -86344003 + LTR48 LTR ERV1 522 787 0 279 156 8 141 chr5 113286153 113286217 -86343933 - MER31-int LTR ERV1 -3516 1420 1380 1497 89 8 78 chr5 113286217 113286474 -86343676 - L1PA6 LINE L1 0 6154 5916 279 156 8 141 chr5 113286474 113286537 -86343613 - MER31-int LTR ERV1 -3556 1380 1310 2963 162 71 2 chr5 113286697 113287234 -86342916 - LTR39 LTR ERV1 0 783 210 449 214 11 77 chr5 113287256 113287295 -86342855 - L1MB8 LINE L1 -11 6167 6127 2033 125 30 3 chr5 113287295 113287591 -86342559 - AluJb SINE Alu -8 304 1 449 214 11 77 chr5 113287591 113287733 -86342417 - L1MB8 LINE L1 -51 6127 5998 1126 126 42 0 chr5 113287738 113287929 -86342221 - LTR39 LTR ERV1 -552 231 33 2322 75 7 3 chr5 113288391 113288686 -86341464 - AluSg SINE Alu -14 296 1 987 223 46 9 chr5 113288693 113289020 -86341130 - LTR37A LTR ERV1 -11 415 77 1084 191 9 26 chr5 113289090 113289321 -86340829 + MER87 LTR ERV1 1 227 -314 1415 229 20 0 chr5 113289371 113289677 -86340473 + MER87 LTR ERV1 230 541 0 2493 126 5 41 chr5 113290207 113290645 -86339505 + MER65A LTR ERV1 1 422 -23 768 90 49 0 chr5 113290642 113290764 -86339386 + MER2 DNA MER2_type 138 265 -80 * 24 67 0 0 chr5 113291046 113291091 -86339059 + AT_rich Low_complexity Low_complexity 1 45 0 1704 168 41 29 chr5 113291257 113291597 -86338553 - MER2 DNA MER2_type 0 344 1 2414 138 38 73 chr5 113291723 113292346 -86337804 + MER4B LTR ERV1 1 774 -5 1487 145 17 74 chr5 113292360 113292712 -86337438 + MER31B LTR ERV1 1 332 -134 1183 218 116 68 chr5 113292817 113293538 -86336612 + MER52A LTR ERV1 119 1755 0 942 164 11 0 chr5 113293538 113293727 -86336423 + L1P LINE L1 4966 5156 -990 674 118 24 24 chr5 113293727 113293854 -86336296 + L1PA14 LINE L1 6035 6161 0 270 0 0 0 chr5 113294599 113294629 -86335521 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 414 0 0 0 chr5 113294628 113294674 -86335476 + (CA)n Simple_repeat Simple_repeat 1 46 0 586 287 213 15 chr5 113295641 113296128 -86334022 - L2 LINE L2 0 3313 2740 2623 155 37 8 chr5 113296192 113296681 -86333469 - MER41B LTR ERV1 0 635 133 1123 189 3 86 chr5 113296661 113296952 -86333198 - MER41C LTR ERV1 -287 267 1 * 1970 158 3 3 chr5 113296991 113297295 -86332855 - AluJb SINE Alu -4 308 5 1074 195 56 0 chr5 113297343 113297574 -86332576 - MER58B DNA MER1_type -6 335 92 2788 10 0 0 chr5 113297604 113297906 -86332244 + AluYa5 SINE Alu 1 302 -9 25061 137 20 11 chr5 113297907 113303052 -86327098 - L1PA8A LINE L1 -28 6418 1151 219 88 0 0 chr5 113303052 113303086 -86327064 + (TTG)n Simple_repeat Simple_repeat 3 36 0 25061 137 20 11 chr5 113303086 113304244 -86325906 - L1PA8A LINE L1 -5295 1151 4 404 205 0 123 chr5 113304244 113304314 -86325836 - MER58B DNA MER1_type -234 107 57 703 173 15 45 chr5 113304314 113304447 -86325703 + FLAM_A SINE Alu 3 131 -2 404 205 0 123 chr5 113304447 113304498 -86325652 - MER58B DNA MER1_type -284 57 1 1876 149 7 20 chr5 113304691 113304986 -86325164 + AluJo SINE Alu 1 291 -21 482 263 155 47 chr5 113305455 113305733 -86324417 + Charlie2a DNA MER1_type 213 520 -2262 * 633 252 68 0 chr5 113305702 113305952 -86324198 + Charlie2a DNA MER1_type 744 1010 -1852 232 239 76 0 chr5 113305967 113306059 -86324091 + Charlie2a DNA MER1_type 2759 2857 -5 4330 106 40 3 chr5 113306092 113306774 -86323376 + L1PA16 LINE L1 5457 6163 -3 552 244 72 84 chr5 113307066 113307524 -86322626 - MER39 LTR ERV1 -42 636 49 407 341 42 24 chr5 113307546 113307713 -86322437 - MIR SINE MIR -73 189 20 607 93 27 0 chr5 113308686 113308784 -86321366 + L1PA7 LINE L1 6032 6145 -9 45 69 0 0 chr5 113308784 113308871 -86321279 + AT_rich Low_complexity Low_complexity 1 87 0 773 174 102 47 chr5 113308881 113308985 -86321165 - MER39 LTR ERV1 -67 640 543 1542 185 33 17 chr5 113308985 113309287 -86320863 - AluJo SINE Alu -5 307 1 773 174 102 47 chr5 113309287 113309417 -86320733 - MER39 LTR ERV1 -164 543 393 572 196 0 0 chr5 113309439 113309541 -86320609 + Ricksha DNA DNA 2 103 -1151 1126 85 30 0 chr5 113309553 113309718 -86320432 + Ricksha DNA DNA 239 408 -846 4166 141 8 20 chr5 113309719 113310018 -86320132 + Ricksha DNA DNA 2501 2802 -449 1611 196 6 25 chr5 113310018 113310335 -86319815 - AluJo SINE Alu -1 311 1 4166 141 8 20 chr5 113310335 113310787 -86319363 + Ricksha DNA DNA 2802 3243 -8 416 235 108 59 chr5 113310801 113311030 -86319120 - MER39 LTR ERV1 -320 387 1 189 74 0 0 chr5 113311493 113311520 -86318630 + (CA)n Simple_repeat Simple_repeat 1 27 0 306 222 37 93 chr5 113311526 113311634 -86318516 - MER5B DNA MER1_type -76 102 1 186 158 26 0 chr5 113311634 113311670 -86318480 + MER5C DNA MER1_type 75 111 -213 1546 211 3 3 chr5 113311672 113311961 -86318189 + AluJo SINE Alu 3 291 -21 21424 129 15 64 chr5 113311974 113316279 -86313871 + L1P LINE L1 12 4102 -2044 1437 84 4 26 chr5 113316279 113316505 -86313645 - pTR5 LTR ERV1 -2046 392 172 278 235 31 20 chr5 113316508 113316606 -86313544 - LTR30 LTR ERV1 -80 642 544 4043 133 104 46 chr5 113316606 113317597 -86312553 - pTR5 LTR ERV1 -413 2025 750 8846 99 11 0 chr5 113317597 113319650 -86310500 + L1PA7 LINE L1 4093 6154 0 23 33 0 0 chr5 113319705 113319735 -86310415 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr5 113319773 113319809 -86310341 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr5 113319882 113319912 -86310238 + AT_rich Low_complexity Low_complexity 1 30 0 1984 141 0 7 chr5 113319913 113320204 -86309946 - AluJo SINE Alu -23 289 1 204 200 0 0 chr5 113320291 113320331 -86309819 - L2 LINE L2 -364 2950 2911 312 266 177 6 chr5 113320469 113320627 -86309523 + LTR33 LTR ERVL 337 521 0 829 266 86 17 chr5 113320840 113321130 -86309020 - MLT2E LTR ERVL -12 616 307 2045 97 0 55 chr5 113321766 113322113 -86308037 + AluSc SINE Alu 1 281 -28 367 234 28 0 chr5 113322272 113322379 -86307771 + L1M4 LINE L1 4210 4319 -1827 627 165 0 41 chr5 113322614 113322735 -86307415 + FLAM_A SINE Alu 27 142 0 39 0 0 0 chr5 113323040 113323079 -86307071 + AT_rich Low_complexity Low_complexity 1 39 0 1310 153 118 35 chr5 113323079 113323334 -86306816 - AluJo SINE Alu -22 290 15 581 154 0 41 chr5 113323340 113323463 -86306687 - L1MD3 LINE L1 -12 7983 7866 294 247 13 0 chr5 113323479 113323556 -86306594 - LTR16C LTR ERVL -104 387 310 2065 202 70 33 chr5 113323567 113324167 -86305983 - L1MC4a LINE L1 -98 7710 7089 1149 191 4 42 chr5 113325649 113325885 -86304265 - AluJb SINE Alu 0 312 86 506 156 0 0 chr5 113327022 113327099 -86303051 + AluJ/FLAM SINE Alu 1 77 -235 1614 255 37 70 chr5 113327294 113327747 -86302403 + HAL1 LINE L1 503 970 -1537 2334 118 19 25 chr5 113327747 113328113 -86302037 + THE1B LTR MaLR 1 364 0 12124 86 2 1 chr5 113328113 113329691 -86300459 + THE1B-int LTR MaLR 1 1580 0 2154 148 34 14 chr5 113329691 113330048 -86300102 + THE1B LTR MaLR 1 364 0 1614 255 37 70 chr5 113330048 113330145 -86300005 + HAL1 LINE L1 968 1067 -1440 12784 97 2 1 chr5 113330145 113332739 -86297411 - L1PA7 LINE L1 -4 6150 3552 1614 255 37 70 chr5 113332739 113332969 -86297181 + HAL1 LINE L1 1067 1260 -1247 1044 295 102 8 chr5 113333311 113333694 -86296456 + MLT1G1 LTR MaLR 108 526 -69 243 293 52 0 chr5 113333694 113333810 -86296340 - L1M4 LINE L1 -2254 3892 3771 182 270 14 0 chr5 113334183 113334257 -86295893 + CT-rich Low_complexity Low_complexity 2 76 0 23 33 0 0 chr5 113334351 113334381 -86295769 + AT_rich Low_complexity Low_complexity 1 30 0 279 333 114 8 chr5 113335207 113335330 -86294820 - L2 LINE L2 -3 3269 3134 284 203 0 178 chr5 113335470 113335588 -86294562 + MER102a DNA MER1_type 231 327 -3 1546 165 39 42 chr5 113335668 113335953 -86294197 + AluJo SINE Alu 1 284 -28 405 0 0 0 chr5 113335953 113335998 -86294152 + (CA)n Simple_repeat Simple_repeat 2 46 0 227 326 51 0 chr5 113336580 113336718 -86293432 - L1M4 LINE L1 -3336 2810 2666 4100 156 34 20 chr5 113336732 113337256 -86292894 + Tigger7 DNA MER2_type 17 555 -1932 1932 91 4 4 chr5 113337256 113337509 -86292641 + AluSx SINE Alu 54 306 -6 4100 156 34 20 chr5 113337509 113337728 -86292422 + Tigger7 DNA MER2_type 555 770 -1717 1586 135 138 6 chr5 113337728 113338055 -86292095 + Tigger7 DNA MER2_type 2118 2487 0 1434 199 63 40 chr5 113338053 113338573 -86291577 - MLT1E3 LTR MaLR 0 624 1 * 340 259 71 9 chr5 113338755 113338867 -86291283 - L1M4 LINE L1 -3764 2382 2264 619 298 59 32 chr5 113338886 113339258 -86290892 - MLT1H LTR MaLR -2 547 166 794 300 76 22 chr5 113339925 113340282 -86289868 + MLT1J LTR MaLR 128 503 -8 180 261 0 0 chr5 113340456 113340502 -86289648 + L2 LINE L2 3227 3272 0 256 327 36 18 chr5 113340538 113340648 -86289502 + L2 LINE L2 2946 3057 -215 232 150 0 0 chr5 113340851 113340890 -86289260 - MLT2D LTR ERVL -10 510 472 5819 101 20 65 chr5 113340890 113341434 -86288716 - Tigger4(Zombi) DNA MER2_type -2 2729 2162 717 213 0 0 chr5 113341434 113341561 -86288589 - FLAM_A SINE Alu -6 127 1 5819 101 20 65 chr5 113341561 113341768 -86288382 - Tigger4(Zombi) DNA MER2_type -569 2162 1947 1955 170 7 0 chr5 113341768 113342068 -86288082 - AluJb SINE Alu -10 302 1 5819 101 20 65 chr5 113342068 113342291 -86287859 - Tigger4(Zombi) DNA MER2_type -784 1947 1804 2073 136 7 3 chr5 113342291 113342593 -86287557 - AluSq SINE Alu -10 303 1 5819 101 20 65 chr5 113342593 113342699 -86287451 - Tigger4(Zombi) DNA MER2_type -927 1804 1695 818 186 71 0 chr5 113342716 113342899 -86287251 - Tigger4(Zombi) DNA MER2_type -2534 197 2 2252 130 41 112 chr5 113342921 113343255 -86286895 - Tigger1 DNA MER2_type 0 2418 2062 2365 91 7 3 chr5 113343255 113343564 -86286586 - AluSg SINE Alu 0 310 1 2252 130 41 112 chr5 113343564 113343613 -86286537 - Tigger1 DNA MER2_type -356 2062 2011 2299 87 0 0 chr5 113343613 113343901 -86286249 - AluY SINE Alu -15 296 9 2252 130 41 112 chr5 113343901 113344024 -86286126 - Tigger1 DNA MER2_type -407 2011 1947 596 144 0 10 chr5 113344026 113344123 -86286027 - Tigger1 DNA MER2_type -2298 120 25 189 74 0 0 chr5 113344131 113344158 -86285992 + (CA)n Simple_repeat Simple_repeat 2 28 0 1883 180 11 3 chr5 113344158 113344514 -86285636 - MLT2D LTR ERVL -55 359 1 1163 188 240 19 chr5 113344548 113344856 -86285294 - MSTB LTR MaLR 0 426 51 189 344 16 0 chr5 113345676 113345740 -86284410 - L2 LINE L2 -18 3295 3231 573 238 229 8 chr5 113345909 113346153 -86283997 + LTR16C LTR ERVL 194 491 0 348 277 96 42 chr5 113346153 113346413 -86283737 - L2 LINE L2 -72 3241 2968 606 284 5 9 chr5 113347145 113347367 -86282783 + L1PB3 LINE L1 -656 4294966860 -6640 * 13245 192 23 28 chr5 113347337 113351513 -86278637 + L1PB3 LINE L1 1 4193 -2018 1947 160 0 11 chr5 113351513 113351800 -86278350 + AluJb SINE Alu 1 284 -28 13245 192 23 28 chr5 113351800 113352832 -86277318 + L1PB3 LINE L1 4193 4816 -1395 2122 96 3 46 chr5 113352832 113353135 -86277015 + AluSc SINE Alu 1 290 -19 13245 192 23 28 chr5 113353135 113354361 -86275789 + L1PB3 LINE L1 4816 6046 -165 3496 179 24 2 chr5 113354384 113355238 -86274912 - L1MD2 LINE L1 -364 5995 5122 206 438 69 0 chr5 113355830 113355990 -86274160 + L2 LINE L2 2578 2748 -566 267 285 63 0 chr5 113356069 113356205 -86273945 + L1 LINE L1 3340 3482 -2664 2099 111 4 0 chr5 113356920 113357223 -86272927 + AluSg SINE Alu 1 304 0 781 284 121 25 chr5 113357294 113357807 -86272343 + L2 LINE L2 2709 3293 -20 221 102 61 82 chr5 113357808 113357857 -86272293 + L2 LINE L2 3265 3312 -1 22 56 0 0 chr5 113358625 113358661 -86271489 + AT_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr5 113358824 113358858 -86271292 + AT_rich Low_complexity Low_complexity 1 34 0 225 277 48 0 chr5 113358888 113358971 -86271179 - MIR SINE MIR 0 262 176 21 0 0 0 chr5 113358990 113359011 -86271139 + AT_rich Low_complexity Low_complexity 1 21 0 787 280 144 49 chr5 113359661 113360196 -86269954 + MLT1K LTR MaLR 3 588 0 719 251 45 10 chr5 113360609 113360808 -86269342 + MIR SINE MIR 53 258 -4 795 57 0 0 chr5 113361142 113361247 -86268903 + (GAAA)n Simple_repeat Simple_repeat 1 105 0 210 37 0 0 chr5 113361246 113361273 -86268877 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 * 186 344 62 55 chr5 113362199 113362327 -86267823 + L2 LINE L2 2846 2974 -339 1342 254 22 11 chr5 113363310 113363672 -86266478 + L1M2b LINE L1 277 642 -6567 7683 147 36 24 chr5 113363687 113366089 -86264061 + L1MA4 LINE L1 3859 6295 -5 2098 118 0 0 chr5 113366202 113366481 -86263669 + AluSg SINE Alu 1 279 -31 19804 60 7 0 chr5 113366481 113369198 -86260952 + L1P LINE L1 985 3719 -2427 444 141 0 0 chr5 113369298 113369376 -86260774 - L1M4 LINE L1 -1741 4405 4328 14565 45 3 0 chr5 113369437 113372004 -86258146 + L1PA5 LINE L1 3576 6147 -7 21 0 0 0 chr5 113372004 113372025 -86258125 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 113373340 113373378 -86256772 + AT_rich Low_complexity Low_complexity 1 38 0 5529 172 42 10 chr5 113373712 113374733 -86255417 - L1PA16 LINE L1 -3 6163 5176 2238 162 39 5 chr5 113374733 113375147 -86255003 + MSTA LTR MaLR 1 428 0 9384 158 24 11 chr5 113375147 113376773 -86253377 + MSTA-int LTR MaLR 1 1647 -4 2319 156 62 0 chr5 113376777 113377180 -86252970 + MSTA LTR MaLR 1 428 0 5529 172 42 10 chr5 113377180 113378235 -86251915 - L1PA16 LINE L1 -992 5174 4015 470 343 39 11 chr5 113378387 113378565 -86251585 + MIR SINE MIR 59 241 -21 257 219 135 10 chr5 113378693 113378789 -86251361 + L2 LINE L2 3052 3159 -154 266 325 82 74 chr5 113380314 113380975 -86249175 + L2 LINE L2 817 1482 -1832 447 352 175 13 chr5 113381351 113382030 -86248120 + L2 LINE L2 2044 2832 -482 2096 110 17 3 chr5 113432054 113432346 -86197804 - AluSg SINE Alu -14 296 1 721 296 73 14 chr5 113432744 113432964 -86197186 + MIR SINE MIR 3 235 -27 280 308 39 10 chr5 113433057 113433161 -86196989 + L2 LINE L2 3192 3298 -15 898 298 77 39 chr5 113434483 113434977 -86195173 - L1ME3A LINE L1 -230 5940 5428 270 79 0 0 chr5 113434981 113435019 -86195131 + L1M4 LINE L1 5815 5852 -332 810 118 21 76 chr5 113435032 113435176 -86194974 - AluJo SINE Alu -176 136 1 432 310 128 75 chr5 113436657 113436752 -86193398 - MLT1K LTR MaLR -10 578 490 867 153 8 8 chr5 113436752 113436883 -86193267 + FLAM_A SINE Alu 1 131 -2 432 310 128 75 chr5 113436883 113437161 -86192989 - MLT1K LTR MaLR -98 490 185 2077 157 0 0 chr5 113437501 113437813 -86192337 + AluJb SINE Alu 1 312 0 322 320 85 7 chr5 113438632 113438785 -86191365 + MIR SINE MIR 39 203 -59 250 217 33 17 chr5 113439057 113439117 -86191033 + GA-rich Low_complexity Low_complexity 3 63 0 1084 210 0 0 chr5 113439333 113439519 -86190631 + MER5A DNA MER1_type 4 189 0 1719 167 17 3 chr5 113441660 113441954 -86188196 + AluJo SINE Alu 1 298 -14 293 155 17 17 chr5 113442383 113442441 -86187709 + L2 LINE L2 3189 3246 -67 383 338 50 0 chr5 113442508 113442647 -86187503 - MIR SINE MIR -36 226 81 415 304 169 0 chr5 113442871 113443019 -86187131 - MER5A DNA MER1_type -8 181 9 2114 168 15 0 chr5 113443217 113443556 -86186594 + MER2 DNA MER2_type 1 344 0 410 167 107 0 chr5 113443634 113443718 -86186432 - MIR3 SINE MIR -23 185 93 1634 256 63 54 chr5 113444001 113444222 -86185928 - HsTC2a DNA Tc2 -1165 735 517 2240 214 139 15 chr5 113444222 113444741 -86185409 + MER119 DNA MER1_type 1 583 0 1634 256 63 54 chr5 113444741 113445219 -86184931 - HsTC2a DNA Tc2 -1383 517 30 6258 143 10 5 chr5 113445350 113446190 -86183960 - L1PB1 LINE L1 0 6151 5300 2198 111 3 0 chr5 113446190 113446496 -86183654 - AluSx SINE Alu -5 307 1 6258 143 10 5 chr5 113446496 113447242 -86182908 - L1PB1 LINE L1 -851 5300 4559 375 276 125 56 chr5 113447679 113447911 -86182239 + MIR SINE MIR 4 251 -11 602 319 140 16 chr5 113448050 113448429 -86181721 + L2 LINE L2 2534 2959 -355 413 248 60 26 chr5 113448511 113448628 -86181522 + L2 LINE L2 3193 3313 0 21 0 0 0 chr5 113449422 113449443 -86180707 + AT_rich Low_complexity Low_complexity 1 21 0 222 253 172 30 chr5 113449727 113449826 -86180324 - MIR SINE MIR -53 209 97 406 332 105 34 chr5 113450214 113450594 -86179556 - L2 LINE L2 -337 2977 2571 380 295 133 12 chr5 113451293 113451466 -86178684 - MIR SINE MIR -33 229 36 1751 333 31 15 chr5 113452353 113453301 -86176849 + HERV16 LTR ERVL 390 1372 -3624 2264 157 12 25 chr5 113453619 113454020 -86176130 - MLT1A1-int LTR MaLR -1338 397 2 1338 179 21 6 chr5 113454025 113454309 -86175841 - MLT1A1 LTR MaLR -3 362 1 1024 264 39 4 chr5 113454315 113454569 -86175581 + LTR16B LTR ERVL 201 463 -1 399 294 0 0 chr5 113454569 113454654 -86175496 + L2 LINE L2 3146 3230 -42 2388 67 37 0 chr5 113455010 113455307 -86174843 - AluSg1 SINE Alu -1 308 1 305 234 0 13 chr5 113455757 113455834 -86174316 - MIR SINE MIR -108 154 79 21 0 0 0 chr5 113457277 113457298 -86172852 + AT_rich Low_complexity Low_complexity 1 21 0 519 141 0 0 chr5 113458182 113458274 -86171876 + (TCC)n Simple_repeat Simple_repeat 3 94 0 855 254 60 68 chr5 113458288 113458686 -86171464 + MLT1G LTR MaLR 1 395 -195 345 156 0 0 chr5 113458835 113458912 -86171238 + CT-rich Low_complexity Low_complexity 2 78 0 2184 96 0 69 chr5 113461339 113461671 -86168479 + AluSq SINE Alu 1 309 -4 1633 188 9 35 chr5 113462306 113462625 -86167525 + AluJo SINE Alu 1 311 -1 1694 188 172 68 chr5 113462731 113463065 -86167085 + MLT1E2 LTR MaLR 1 405 -221 2385 97 0 0 chr5 113463065 113463373 -86166777 + AluY SINE Alu 1 308 -3 1694 188 172 68 chr5 113463373 113463537 -86166613 + MLT1E2 LTR MaLR 405 551 -75 24 32 0 0 chr5 113463616 113463647 -86166503 + AT_rich Low_complexity Low_complexity 1 31 0 8807 115 21 35 chr5 113464024 113465912 -86164238 - L1P3 LINE L1 -4387 1759 12 351 0 0 0 chr5 113466591 113466630 -86163520 + (TG)n Simple_repeat Simple_repeat 1 39 0 1262 190 71 4 chr5 113466630 113466883 -86163267 - AluJo SINE Alu -31 281 12 568 212 9 35 chr5 113467762 113467875 -86162275 - MER81 DNA DNA 0 114 5 347 285 126 43 chr5 113468458 113468520 -86161630 - L1ME4a LINE L1 -23 6098 6043 1959 100 90 4 chr5 113468520 113468799 -86161351 + AluSx SINE Alu 1 303 -9 347 285 126 43 chr5 113468799 113468878 -86161272 - L1ME4a LINE L1 -78 6043 5972 406 73 15 15 chr5 113468878 113468946 -86161204 + (TA)n Simple_repeat Simple_repeat 2 69 0 347 285 126 43 chr5 113468946 113469007 -86161143 - L1ME4a LINE L1 -149 5972 5917 1783 185 54 51 chr5 113469007 113469380 -86160770 + MLT1A2 LTR MaLR 1 374 0 347 285 126 43 chr5 113469380 113469477 -86160673 - L1ME4a LINE L1 -204 5917 5772 368 286 76 29 chr5 113469847 113470018 -86160132 + MLT1L LTR MaLR 437 615 0 780 284 44 52 chr5 113470041 113470143 -86160007 - L1ME4a LINE L1 -425 5696 5595 873 144 0 43 chr5 113470143 113470282 -86159868 - FLAM_C SINE Alu 0 133 1 780 284 44 52 chr5 113470282 113470563 -86159587 - L1ME4a LINE L1 -526 5595 5316 2418 206 69 10 chr5 113472187 113472227 -86157923 - MLT2B1 LTR ERVL 0 520 484 549 0 0 0 chr5 113472227 113472288 -86157862 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 2418 206 69 10 chr5 113472288 113472738 -86157412 - MLT2B1 LTR ERVL -36 484 1 2222 108 120 0 chr5 113472846 113473171 -86156979 - THE1B LTR MaLR 0 364 1 2102 275 84 21 chr5 113473378 113474635 -86155515 + L1MEc LINE L1 20 1403 -4993 1874 196 142 2 chr5 113474635 113475078 -86155072 + MLT1D LTR MaLR 1 505 0 2102 275 84 21 chr5 113475078 113475148 -86155002 + L1MEc LINE L1 1403 1467 -4929 1153 158 15 20 chr5 113475151 113475347 -86154803 + AluJb SINE Alu 90 284 -28 181 213 148 33 chr5 113475623 113475684 -86154466 - MIR SINE MIR -147 115 48 539 207 51 173 chr5 113475896 113476103 -86154047 + MLT1G LTR MaLR 26 197 -354 396 0 0 0 chr5 113476103 113476147 -86154003 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 539 207 51 173 chr5 113476147 113476234 -86153916 + MLT1G LTR MaLR 197 293 -258 852 231 36 39 chr5 113476269 113476606 -86153544 + L1MEc LINE L1 1729 2064 -4332 577 160 20 0 chr5 113476607 113476707 -86153443 + MER58A DNA MER1_type 2 103 -4 365 68 51 0 chr5 113476712 113476771 -86153379 + MER58A DNA MER1_type 163 224 0 245 209 39 62 chr5 113476771 113476900 -86153250 + L1MEc LINE L1 2057 2182 -4214 350 323 81 104 chr5 113477054 113477525 -86152625 + L2 LINE L2 2813 3272 0 597 242 153 28 chr5 113477583 113477798 -86152352 - MIR SINE MIR 0 262 21 445 248 38 0 chr5 113477790 113477895 -86152255 - MIR3 SINE MIR -6 202 94 * 1725 151 49 26 chr5 113479651 113479776 -86150374 + AluSx SINE Alu 1 122 -190 2162 97 7 17 chr5 113479776 113480076 -86150074 + AluSg SINE Alu 3 299 -11 1725 151 49 26 chr5 113480076 113480255 -86149895 + AluSx SINE Alu 122 312 0 4235 86 17 5 chr5 113481249 113481840 -86148310 - L1PA8A LINE L1 -7 6124 5527 2202 67 3 11 chr5 113481890 113482202 -86147948 + AluY SINE Alu 1 310 0 579 283 83 4 chr5 113482203 113482443 -86147707 + LTR16C LTR ERVL 233 491 0 784 273 48 40 chr5 113482505 113482754 -86147396 + MIR SINE MIR 8 258 -4 1929 162 19 30 chr5 113483118 113483489 -86146661 + MLT2D LTR ERVL 1 367 -47 243 0 0 0 chr5 113483505 113483532 -86146618 + (TA)n Simple_repeat Simple_repeat 2 28 0 371 130 0 14 chr5 113483532 113483601 -86146549 + (CA)n Simple_repeat Simple_repeat 1 68 0 44 46 0 0 chr5 113483862 113483927 -86146223 + AT_rich Low_complexity Low_complexity 1 65 0 27 0 0 0 chr5 113484068 113484095 -86146055 + AT_rich Low_complexity Low_complexity 1 27 0 1556 181 85 7 chr5 113484106 113484388 -86145762 + AluJb SINE Alu 2 305 -7 2073 138 10 3 chr5 113484570 113484874 -86145276 - AluSx SINE Alu -6 306 1 1737 114 129 0 chr5 113485529 113485792 -86144358 - AluSg SINE Alu -3 297 1 28 29 0 0 chr5 113486011 113486046 -86144104 + AT_rich Low_complexity Low_complexity 1 35 0 219 69 0 0 chr5 113486250 113486279 -86143871 + (GCTG)n Simple_repeat Simple_repeat 2 30 0 554 280 117 21 chr5 113486534 113486773 -86143377 + MIR SINE MIR 1 262 0 22 0 0 0 chr5 113487102 113487124 -86143026 + AT_rich Low_complexity Low_complexity 1 22 0 389 172 11 23 chr5 113487933 113488020 -86142130 + LTR33A LTR ERVL 437 522 -1 442 314 89 44 chr5 113488021 113488292 -86141858 + L1MC4a LINE L1 5796 6078 -1730 403 204 0 74 chr5 113488615 113488723 -86141427 - HsTC2 DNA Tc2 -4 1894 1795 1710 242 178 5 chr5 113488729 113489348 -86140802 - HsTC2 DNA Tc2 -1172 726 1 343 308 157 6 chr5 113489348 113489520 -86140630 - MIR SINE MIR -64 198 1 497 260 130 26 chr5 113489556 113489749 -86140401 - L1ME4a LINE L1 -31 6090 5860 1141 225 143 50 chr5 113489749 113490211 -86139939 - MLT1D LTR MaLR 0 505 1 497 260 130 26 chr5 113490211 113490286 -86139864 - L1ME4a LINE L1 -261 5860 5794 232 340 57 38 chr5 113490578 113490737 -86139413 + MIR SINE MIR 34 195 -67 381 266 23 55 chr5 113491556 113491684 -86138466 + L2 LINE L2 3145 3268 -4 202 186 34 34 chr5 113491687 113491746 -86138404 - L3 LINE CR1 -146 1431 1373 243 91 0 0 chr5 113493259 113493303 -86136847 + L1MA3 LINE L1 6262 6305 0 520 306 94 25 chr5 113494333 113494578 -86135572 + MIR SINE MIR 1 262 0 403 296 33 88 chr5 113494818 113495092 -86135058 - LTR33 LTR ERVL -260 261 3 1309 209 58 9 chr5 113495125 113495450 -86134700 - MLT1A1 LTR MaLR 0 365 25 660 277 84 49 chr5 113495514 113496191 -86133959 + L1ME4a LINE L1 4500 5152 -1010 1890 169 13 3 chr5 113496191 113496493 -86133657 + AluJo SINE Alu 1 305 -7 660 277 84 49 chr5 113496493 113497170 -86132980 + L1ME4a LINE L1 5152 5947 -215 219 223 29 29 chr5 113497650 113497753 -86132397 + (TA)n Simple_repeat Simple_repeat 2 104 0 374 265 17 103 chr5 113497836 113498030 -86132120 - MIR SINE MIR -60 202 21 2216 110 0 0 chr5 113498971 113499261 -86130889 + AluSg SINE Alu 1 290 -20 966 161 17 98 chr5 113499312 113499548 -86130602 + MER20 DNA MER1_type 2 218 -1 545 320 75 48 chr5 113501112 113501549 -86128601 + L2 LINE L2 2817 3265 -7 1955 157 0 19 chr5 113502011 113502329 -86127821 + AluJb SINE Alu 1 312 0 1149 260 150 6 chr5 113502764 113503311 -86126839 + L1ME3A LINE L1 5335 5960 -202 992 196 5 0 chr5 113503335 113503519 -86126631 + AluJo SINE Alu 122 306 -6 365 260 43 77 chr5 113503560 113503768 -86126382 + L1ME3A LINE L1 5962 6162 -8 1051 207 5 22 chr5 113504335 113504495 -86125655 + MER20 DNA MER1_type 1 157 -62 2582 143 42 23 chr5 113504495 113504971 -86125179 - MER31A LTR ERV1 0 485 1 1051 207 5 22 chr5 113504971 113505032 -86125118 + MER20 DNA MER1_type 157 218 -1 282 246 22 37 chr5 113505179 113505313 -86124837 + L1ME4a LINE L1 5987 6118 -3 234 333 147 0 chr5 113506931 113507033 -86123117 + L2 LINE L2 2942 3058 -214 700 319 29 0 chr5 113509627 113509837 -86120313 - MIR SINE MIR 0 262 47 517 315 15 11 chr5 113509975 113510235 -86119915 + MIR SINE MIR 2 262 0 716 284 75 29 chr5 113510836 113511075 -86119075 - MIR SINE MIR 0 262 13 2125 124 0 0 chr5 113511298 113511597 -86118553 - AluSg1 SINE Alu -10 299 1 2236 107 6 28 chr5 113511637 113511955 -86118195 + AluSx SINE Alu 1 311 -1 447 185 0 0 chr5 113512167 113512259 -86117891 + CT-rich Low_complexity Low_complexity 2 93 0 1657 168 21 7 chr5 113512259 113512545 -86117605 - AluJb SINE Alu -16 296 7 229 296 0 0 chr5 113512921 113512992 -86117158 + MLT1K LTR MaLR 517 587 -1 273 59 0 0 chr5 113513084 113513118 -86117032 + MLT1E1 LTR MaLR 1 34 -590 809 133 0 16 chr5 113513126 113513254 -86116896 + FLAM_A SINE Alu 10 135 -7 461 264 39 16 chr5 113513268 113513397 -86116753 + MLT1E1 LTR MaLR 18 149 -505 928 234 32 20 chr5 113513432 113513680 -86116470 + MLT1E1 LTR MaLR 389 639 -15 627 210 58 0 chr5 113513794 113513932 -86116218 + MLT1B LTR MaLR 2 147 -243 21 0 0 0 chr5 113514142 113514163 -86115987 + AT_rich Low_complexity Low_complexity 1 21 0 1788 147 57 85 chr5 113514201 113514602 -86115548 - MLT1B LTR MaLR 0 390 1 29 0 0 0 chr5 113514886 113514915 -86115235 + AT_rich Low_complexity Low_complexity 1 29 0 698 337 103 24 chr5 113515180 113515790 -86114360 + L2 LINE L2 2532 3192 -121 24 53 0 0 chr5 113516237 113516275 -86113875 + AT_rich Low_complexity Low_complexity 1 38 0 1679 140 31 65 chr5 113516324 113516710 -86113440 - THE1C LTR MaLR -2 373 1 1834 100 63 47 chr5 113516751 113517050 -86113100 - AluSx SINE Alu -8 304 1 2325 113 0 3 chr5 113517121 113517432 -86112718 + AluSg SINE Alu 1 310 0 24 77 0 0 chr5 113517491 113517543 -86112607 + AT_rich Low_complexity Low_complexity 1 52 0 1864 209 59 11 chr5 113517873 113518399 -86111751 - L1M4 LINE L1 -908 5238 4688 * 3053 200 54 37 chr5 113518395 113518460 -86111690 + L1ME1 LINE L1 5296 5358 -808 1081 192 16 64 chr5 113518460 113518540 -86111610 - MER8 DNA MER2_type -1 238 156 2139 132 0 3 chr5 113518540 113518850 -86111300 + AluSx SINE Alu 1 309 -3 1081 192 16 64 chr5 113518850 113519019 -86111131 - MER8 DNA MER2_type -83 156 1 3053 200 54 37 chr5 113519019 113519793 -86110357 + L1ME1 LINE L1 5358 6149 -17 2012 123 3 23 chr5 113520148 113520448 -86109702 - AluSc SINE Alu -15 294 1 348 245 51 0 chr5 113520468 113520566 -86109584 - MIR SINE MIR -77 185 83 327 313 65 57 chr5 113520605 113520835 -86109315 + L2 LINE L2 3077 3308 -5 1977 142 19 13 chr5 113520885 113521195 -86108955 - AluSx SINE Alu 0 312 1 187 320 0 0 chr5 113521303 113521353 -86108797 - MER5A DNA MER1_type 0 189 140 2464 260 76 47 chr5 113521488 113522101 -86108049 - HAL1 LINE L1 -151 2356 1762 5054 63 20 1 chr5 113522101 113522747 -86107403 - PABL_A LTR ERV1 -2 658 1 2464 260 76 47 chr5 113522747 113523441 -86106709 - HAL1 LINE L1 -745 1762 1011 350 291 84 84 chr5 113523550 113523918 -86106232 - HAL1 LINE L1 -1816 691 324 1158 135 0 0 chr5 113523963 113524119 -86106031 + AluSx SINE Alu 34 189 -123 214 246 46 15 chr5 113524256 113524321 -86105829 + MER5B DNA MER1_type 87 153 -25 1988 139 34 0 chr5 113524449 113524743 -86105407 + AluSx SINE Alu 1 304 -8 238 206 132 15 chr5 113525818 113525886 -86104264 + L2 LINE L2 3193 3268 -4 2841 164 58 41 chr5 113526398 113527085 -86103065 - MER67C LTR ERV1 0 710 12 197 319 117 0 chr5 113527592 113527686 -86102464 - L2 LINE L2 -23 3290 3186 305 279 109 85 chr5 113528617 113528911 -86101239 + L1M2 LINE L1 654 954 -5895 2400 83 3 0 chr5 113530431 113530743 -86099407 + AluSp SINE Alu 1 313 0 214 209 23 0 chr5 113530758 113530801 -86099349 + (CATATA)n Simple_repeat Simple_repeat 1 44 0 205 196 0 71 chr5 113531723 113531779 -86098371 + CT-rich Low_complexity Low_complexity 4 55 0 410 330 80 27 chr5 113532450 113532638 -86097512 + MIR SINE MIR 8 205 -57 223 162 0 44 chr5 113532776 113532844 -86097306 + (TTAAA)n Simple_repeat Simple_repeat 3 67 0 22 56 0 0 chr5 113533133 113533169 -86096981 + AT_rich Low_complexity Low_complexity 1 36 0 1794 172 20 7 chr5 113533648 113533950 -86096200 + AluJo SINE Alu 1 306 -6 2304 106 0 0 chr5 113535002 113535305 -86094845 - AluSp SINE Alu -10 303 1 2323 86 0 16 chr5 113535389 113535693 -86094457 + AluSx SINE Alu 1 299 -13 22 0 0 0 chr5 113536021 113536043 -86094107 + AT_rich Low_complexity Low_complexity 1 22 0 183 344 49 0 chr5 113536551 113536612 -86093538 - MIR SINE MIR -152 110 47 230 395 25 0 chr5 113537812 113537931 -86092219 + MIR SINE MIR 36 157 -105 462 312 58 48 chr5 113538077 113538372 -86091778 - MLT1K LTR MaLR -274 314 17 1266 164 303 6 chr5 113538706 113539029 -86091121 - MSTD-int LTR MaLR -1316 419 1 1259 206 78 81 chr5 113539029 113539426 -86090724 - MSTD LTR MaLR 0 396 1 8218 137 21 13 chr5 113539557 113540443 -86089707 - Tigger1 DNA MER2_type -1000 1418 514 2195 85 4 0 chr5 113540443 113540747 -86089403 - AluSg SINE Alu 0 305 1 8218 137 21 13 chr5 113540747 113541266 -86088884 - Tigger1 DNA MER2_type -1904 514 1 1667 142 0 16 chr5 113541441 113541687 -86088463 - AluSx SINE Alu -23 289 48 815 279 141 17 chr5 113541754 113542116 -86088034 + L2 LINE L2 2393 2799 -515 807 274 148 58 chr5 113542237 113542671 -86087479 + L2 LINE L2 2841 3313 0 580 291 61 35 chr5 113542721 113543034 -86087116 - LTR40a LTR ERVL -7 512 192 332 215 207 41 chr5 113543180 113543301 -86086849 - LTR40a LTR ERVL -378 141 1 729 328 25 31 chr5 113543431 113543751 -86086399 - MLT1K LTR MaLR -260 328 11 26 0 0 0 chr5 113543883 113543909 -86086241 + AT_rich Low_complexity Low_complexity 1 26 0 2300 111 3 0 chr5 113543909 113544216 -86085934 - AluSp SINE Alu -5 308 1 811 181 50 12 chr5 113544360 113544520 -86085630 + MER96 DNA MER1_type? 2 167 -8 894 176 14 0 chr5 113544934 113545082 -86085068 - AluJb SINE Alu -5 307 158 1958 164 0 7 chr5 113545452 113545751 -86084399 - AluJo SINE Alu -15 297 1 29 0 0 0 chr5 113545754 113545783 -86084367 + AT_rich Low_complexity Low_complexity 1 29 0 245 368 98 8 chr5 113545879 113546012 -86084138 - L2 LINE L2 -1 3271 3127 2040 136 3 16 chr5 113546538 113546854 -86083296 + AluSx SINE Alu 1 312 0 1696 189 18 0 chr5 113547019 113547299 -86082851 - AluJb SINE Alu -25 287 3 208 344 18 78 chr5 113547562 113547780 -86082370 - L3 LINE CR1 -354 1223 1019 564 298 178 63 chr5 113548173 113548348 -86081802 - L2 LINE L2 0 3313 3160 2184 114 0 7 chr5 113548348 113548646 -86081504 - AluSx SINE Alu -16 296 1 564 298 178 63 chr5 113548646 113549268 -86080882 - L2 LINE L2 -153 3160 2431 2246 112 3 16 chr5 113549431 113549452 -86080698 - AluSp SINE Alu -5 308 288 225 0 0 0 chr5 113549452 113549477 -86080673 + (ATG)n Simple_repeat Simple_repeat 2 26 0 2246 112 3 16 chr5 113549477 113549767 -86080383 - AluSp SINE Alu -25 288 1 630 172 0 182 chr5 113549996 113550194 -86079956 - FRAM SINE Alu -4 162 1 2265 93 3 0 chr5 113550463 113550753 -86079397 - AluSg SINE Alu -19 291 1 305 325 117 8 chr5 113550922 113551042 -86079108 - MIR3 SINE MIR 0 208 76 387 294 97 30 chr5 113551170 113551414 -86078736 - L1MC4 LINE L1 -44 7998 7772 1384 202 52 57 chr5 113551414 113551781 -86078369 - MLT1A1 LTR MaLR 0 365 1 387 294 97 30 chr5 113551781 113551825 -86078325 - L1MC4 LINE L1 -270 7772 7732 309 109 0 0 chr5 113551825 113551871 -86078279 + (TA)n Simple_repeat Simple_repeat 2 47 0 387 294 97 30 chr5 113551871 113551983 -86078167 - L1MC4 LINE L1 -310 7732 7570 5389 93 1 7 chr5 113552693 113553448 -86076702 - L1PA11 LINE L1 -2 6172 5422 * 6097 75 13 0 chr5 113553444 113554795 -86075355 - L1PA8A LINE L1 -1 6130 4769 201 382 122 23 chr5 113554824 113554955 -86075195 + L2 LINE L2 3119 3262 -10 21 0 0 0 chr5 113555040 113555061 -86075089 + AT_rich Low_complexity Low_complexity 1 21 0 561 172 0 0 chr5 113556549 113556642 -86073508 + AluJ/FLAM SINE Alu 2 94 -218 327 211 31 109 chr5 113556652 113556780 -86073370 - L1M4 LINE L1 -841 5305 5188 5587 195 39 23 chr5 113556781 113557150 -86073000 - L1MC1 LINE L1 0 6613 6251 2371 107 19 25 chr5 113557150 113557516 -86072634 - THE1B LTR MaLR 0 364 1 5587 195 39 23 chr5 113557516 113559391 -86070759 - L1MC1 LINE L1 -362 6251 4346 8269 146 63 75 chr5 113559400 113560707 -86069443 - L1MC1 LINE L1 -4298 2128 854 2284 106 0 3 chr5 113560707 113561009 -86069141 - AluSx SINE Alu -11 301 1 8269 146 63 75 chr5 113561009 113561803 -86068347 - L1MC1 LINE L1 -5572 854 52 526 214 0 0 chr5 113561805 113561903 -86068247 - FLAM_A SINE Alu -11 131 34 563 222 22 11 chr5 113561965 113562150 -86068000 - L1M4 LINE L1 -975 5171 4985 810 159 0 14 chr5 113562151 113562289 -86067861 - FLAM_C SINE Alu -1 142 7 836 231 22 6 chr5 113562295 113562544 -86067606 - L1M4 LINE L1 -1154 5252 4999 3491 217 44 50 chr5 113562547 113563601 -86066549 - L1MDb LINE L1 -4953 1422 413 3230 122 16 8 chr5 113564017 113564524 -86065626 - MER9 LTR ERVK 0 511 1 1591 233 27 5 chr5 113565127 113565531 -86064619 - L1MDb LINE L1 -5987 422 10 2195 123 0 0 chr5 113566009 113566317 -86063833 - AluY SINE Alu -3 308 1 7001 193 125 31 chr5 113566440 113568044 -86062106 + MER52A LTR ERV1 1 1755 0 197 325 172 38 chr5 113568095 113568304 -86061846 + L2 LINE L2 2047 2283 -1031 589 171 0 18 chr5 113568582 113568693 -86061457 - L1ME3A LINE L1 -7 6163 6055 2075 137 26 7 chr5 113569114 113569420 -86060730 - AluSx SINE Alu 0 312 1 984 184 12 0 chr5 113569562 113569725 -86060425 + FAM SINE Alu 1 165 -10 374 108 15 0 chr5 113569744 113569809 -86060341 + (CA)n Simple_repeat Simple_repeat 1 66 0 3653 193 42 42 chr5 113570157 113571864 -86058286 - L1MB8 LINE L1 0 6178 4482 2136 103 14 3 chr5 113571864 113572154 -86057996 - AluSp SINE Alu -20 293 1 3653 193 42 42 chr5 113572154 113572329 -86057821 - L1MB8 LINE L1 -1696 4482 4308 4459 114 48 41 chr5 113572394 113573218 -86056932 - L1MA2 LINE L1 0 7723 6894 5431 107 23 69 chr5 113573218 113573724 -86056426 - L1MA2 LINE L1 -4072 3493 2965 2321 112 0 3 chr5 113573724 113574036 -86056114 - AluSq SINE Alu -2 311 1 5431 107 23 69 chr5 113574036 113574552 -86055598 - L1MA2 LINE L1 -4600 2965 2524 1608 182 27 27 chr5 113574552 113574848 -86055302 + AluJo SINE Alu 1 296 -16 5431 107 23 69 chr5 113574848 113574943 -86055207 - L1MA2 LINE L1 -5041 2524 2426 406 129 0 0 chr5 113574946 113575008 -86055142 + Alu SINE Alu 236 297 -15 10351 169 57 16 chr5 113575008 113577322 -86052828 - L1MA2 LINE L1 -5056 2509 27 697 257 40 18 chr5 113577308 113577534 -86052616 - L1MB8 LINE L1 -1867 4279 4049 * 21 0 0 0 chr5 113578057 113578078 -86052072 + AT_rich Low_complexity Low_complexity 1 21 0 1754 145 87 0 chr5 113578083 113578359 -86051791 + AluJb SINE Alu 1 300 -12 410 171 23 0 chr5 113579097 113579185 -86050965 - MER53 DNA DNA -83 106 17 * 432 148 12 0 chr5 113579108 113579189 -86050961 + MER53 DNA DNA 105 186 -3 1751 159 0 0 chr5 113579349 113579619 -86050531 - AluSx SINE Alu -1 311 42 365 244 38 119 chr5 113579651 113579811 -86050339 - HAL1 LINE L1 -2266 241 95 1621 205 17 7 chr5 113579868 113580170 -86049980 - AluJb SINE Alu -7 305 1 1867 226 31 43 chr5 113580243 113580282 -86049868 - L1M4 LINE L1 -1031 5184 5146 2455 58 0 3 chr5 113580282 113580575 -86049575 + AluY SINE Alu 1 292 -19 1867 226 31 43 chr5 113580575 113580946 -86049204 - L1M4 LINE L1 -1069 5146 4781 3732 186 45 13 chr5 113580946 113581656 -86048494 - MER44D DNA MER2_type 0 605 1 1867 226 31 43 chr5 113581656 113581855 -86048295 - L1M4 LINE L1 -1434 4781 4581 12339 209 34 20 chr5 113581878 113584571 -86045579 - L1PA16 LINE L1 -10 6859 4204 2165 112 69 20 chr5 113584571 113584918 -86045232 + THE1B LTR MaLR 1 364 0 11751 87 11 0 chr5 113584918 113586480 -86043670 + THE1B-int LTR MaLR 1 1580 0 2265 130 8 24 chr5 113586480 113586850 -86043300 + THE1B LTR MaLR 1 364 0 12339 209 34 20 chr5 113586850 113589075 -86041075 - L1PA16 LINE L1 -2665 4204 2147 1906 174 0 0 chr5 113589075 113589379 -86040771 - AluJb SINE Alu -8 304 1 12339 209 34 20 chr5 113589379 113590830 -86039320 - L1PA16 LINE L1 -4722 2147 717 2974 256 65 46 chr5 113590831 113591109 -86039041 - L1MEc LINE L1 -3272 2943 2672 2230 175 101 17 chr5 113591109 113591584 -86038566 - MLT2B2 LTR ERVL 0 515 1 2974 256 65 46 chr5 113591584 113593207 -86036943 - L1MEc LINE L1 -3543 2672 1049 3399 137 26 7 chr5 113593772 113594311 -86035839 - MER41C LTR ERV1 -2 552 4 615 230 0 0 chr5 113594485 113594611 -86035539 - L1MC4 LINE L1 -1120 6922 6797 972 244 44 86 chr5 113594622 113595052 -86035098 - L1MC4 LINE L1 -2038 5770 5359 334 231 0 0 chr5 113595493 113595562 -86034588 + FLAM SINE Alu 54 115 -18 393 247 23 121 chr5 113596305 113596432 -86033718 + MER5B DNA MER1_type 21 128 -50 2001 145 3 6 chr5 113596432 113596743 -86033407 + AluJb SINE Alu 3 312 0 393 247 23 121 chr5 113596743 113596789 -86033361 + MER5B DNA MER1_type 128 177 -1 1778 165 3 38 chr5 113597758 113598074 -86032076 + AluJb SINE Alu 1 305 -7 30 0 0 0 chr5 113598110 113598140 -86032010 + AT_rich Low_complexity Low_complexity 1 30 0 1615 174 0 39 chr5 113598630 113598940 -86031210 - AluJo SINE Alu -14 298 1 322 328 99 0 chr5 113599047 113599178 -86030972 + MIR SINE MIR 49 192 -70 319 152 0 0 chr5 113599217 113599263 -86030887 + L1PA15-16 LINE L1 202 247 -6602 187 340 96 0 chr5 113599897 113599991 -86030159 - MIR3 SINE MIR -10 198 96 21 71 0 0 chr5 113600309 113600351 -86029799 + AT_rich Low_complexity Low_complexity 1 42 0 2005 123 43 0 chr5 113600456 113600732 -86029418 + AluSg SINE Alu 1 288 -22 352 246 60 8 chr5 113601168 113601302 -86028848 - L1MEc LINE L1 -4886 1656 1516 28 29 0 0 chr5 113601309 113601344 -86028806 + AT_rich Low_complexity Low_complexity 1 35 0 2893 139 36 47 chr5 113601344 113601925 -86028225 - L1MA9 LINE L1 -31 6281 5707 2064 184 52 0 chr5 113601926 113602311 -86027839 - MSTB2 LTR MaLR 0 457 53 810 105 0 0 chr5 113602311 113602524 -86027626 - AluSg/x SINE Alu 0 389 177 1770 126 20 4 chr5 113602524 113602779 -86027371 - AluSq SINE Alu -54 259 1 398 145 0 0 chr5 113602779 113602841 -86027309 - MSTB2 LTR MaLR -395 62 1 7063 157 24 131 chr5 113602847 113604406 -86025744 - L1MA9 LINE L1 -608 5704 3980 8870 40 3 4 chr5 113604406 113605478 -86024672 - MER11C LTR ERVK 0 1071 1 7063 157 24 131 chr5 113605478 113606068 -86024082 - L1MA9 LINE L1 -2332 3980 3726 773 178 0 0 chr5 113606068 113606197 -86023953 - FLAM_C SINE Alu -12 131 3 7063 157 24 131 chr5 113606197 113606484 -86023666 - L1MA9 LINE L1 -2586 3726 3410 358 222 0 0 chr5 113606499 113606571 -86023579 - L1MEc LINE L1 -6067 758 687 1503 153 0 133 chr5 113607469 113607816 -86022334 - AluJo SINE Alu -1 301 1 728 142 22 52 chr5 113608465 113608599 -86021551 + FLAM_C SINE Alu 2 131 -2 1873 168 3 7 chr5 113608931 113609222 -86020928 + AluJb SINE Alu 1 290 -22 255 241 0 35 chr5 113609274 113609332 -86020818 + polypyrimidine Low_complexity Low_complexity 4 59 0 667 339 138 29 chr5 113609356 113609747 -86020403 - L2 LINE L2 -80 3233 2886 1876 173 0 0 chr5 113609747 113610042 -86020108 + AluSx SINE Alu 1 295 -17 667 339 138 29 chr5 113610042 113610332 -86019818 - L2 LINE L2 -427 2886 2487 400 316 135 8 chr5 113610420 113610657 -86019493 - L2 LINE L2 -2945 369 103 26 64 0 0 chr5 113612150 113612197 -86017953 + AT_rich Low_complexity Low_complexity 1 47 0 755 219 51 65 chr5 113612587 113612879 -86017271 - HsTC2 DNA Tc2 -3 1895 1608 1179 230 109 51 chr5 113612885 113613099 -86017051 - L1MC5 LINE L1 -33 7928 7728 2381 77 0 0 chr5 113613099 113613396 -86016754 + AluY SINE Alu 1 297 -14 1179 230 109 51 chr5 113613396 113613896 -86016254 - L1MC5 LINE L1 -233 7728 7261 2177 119 0 3 chr5 113613922 113614225 -86015925 + AluSx SINE Alu 1 302 -10 767 227 64 31 chr5 113614323 113614567 -86015583 - HsTC2 DNA Tc2 -312 1586 1158 1675 148 39 11 chr5 113614706 113614989 -86015161 - AluSx SINE Alu -21 291 1 317 271 17 51 chr5 113616275 113616394 -86013756 + CT-rich Low_complexity Low_complexity 1 114 0 216 246 0 35 chr5 113616600 113616657 -86013493 + MIR SINE MIR 16 70 -138 205 244 0 0 chr5 113616735 113616776 -86013374 - L2 LINE L2 -11 3261 3221 24 67 0 0 chr5 113617589 113617634 -86012516 + AT_rich Low_complexity Low_complexity 1 45 0 2479 68 0 0 chr5 113618890 113619199 -86010951 - AluY SINE Alu -2 309 1 375 258 50 74 chr5 113619425 113619623 -86010527 - L1MC4 LINE L1 -151 7891 7690 502 128 0 0 chr5 113619623 113619701 -86010449 - MADE1 DNA Mariner -2 78 1 375 258 50 74 chr5 113619701 113620297 -86009853 - L1MC4 LINE L1 -352 7690 7108 863 243 47 39 chr5 113621236 113621623 -86008527 + L1MC5 LINE L1 7542 7931 -30 3356 110 55 26 chr5 113621652 113622052 -86008098 + L1P5 LINE L1 5068 5504 -647 189 0 0 0 chr5 113622052 113622073 -86008077 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3356 110 55 26 chr5 113622073 113622368 -86007782 + L1P5 LINE L1 5504 5789 -362 1251 147 22 9 chr5 113622387 113622611 -86007539 - L1PB1 LINE L1 -142 6009 5783 2207 112 3 0 chr5 113622851 113623147 -86007003 - AluSc SINE Alu -12 297 1 239 309 0 21 chr5 113623191 113623288 -86006862 - L1MC4 LINE L1 -11 8031 7937 339 299 0 0 chr5 113623323 113623487 -86006663 + (TATATG)n Simple_repeat Simple_repeat 3 166 0 355 271 85 53 chr5 113623487 113623768 -86006382 - L1MC4 LINE L1 -124 7918 7629 1553 231 17 59 chr5 113623805 113624281 -86005869 - L1ME1 LINE L1 -5 6555 6100 229 177 16 0 chr5 113624291 113624353 -86005797 + LTR66 LTR ERVL 376 438 -172 317 654 0 7 chr5 113624359 113624512 -86005638 + (TA)n Simple_repeat Simple_repeat 1 152 0 1891 204 86 96 chr5 113624538 113624607 -86005543 - L1ME1 LINE L1 -1818 4722 4654 219 36 0 0 chr5 113624607 113624635 -86005515 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1847 121 3 38 chr5 113624637 113624926 -86005224 - AluSx SINE Alu -33 279 1 1891 204 86 96 chr5 113624926 113625733 -86004417 - L1ME1 LINE L1 -1887 4653 3851 731 181 90 13 chr5 113625733 113625888 -86004262 + FRAM SINE Alu 1 164 -12 3500 244 71 42 chr5 113625891 113626028 -86004122 - L1ME1 LINE L1 -2683 3857 3725 1958 81 8 4 chr5 113626028 113626287 -86003863 - AluY SINE Alu -11 300 41 3500 244 71 42 chr5 113626287 113627320 -86002830 - L1ME1 LINE L1 -2815 3725 2723 1560 204 26 10 chr5 113627320 113627624 -86002526 - AluJo SINE Alu -3 309 1 3500 244 71 42 chr5 113627624 113628899 -86001251 - L1ME1 LINE L1 -3817 2723 1279 352 0 42 0 chr5 113628899 113628947 -86001203 + (TTG)n Simple_repeat Simple_repeat 2 51 0 3500 244 71 42 chr5 113628947 113629222 -86000928 - L1ME1 LINE L1 -5261 1279 1013 2290 77 0 17 chr5 113629354 113629652 -86000498 + AluSc SINE Alu 1 293 -16 1956 106 81 62 chr5 113630583 113630940 -85999210 - THE1B LTR MaLR 0 364 1 1421 284 31 53 chr5 113632698 113633483 -85996667 - L2 LINE L2 0 3313 2536 2014 223 99 46 chr5 113633485 113634099 -85996051 + MER82 DNA MER2_type 1 647 -6 2976 243 118 40 chr5 113634104 113634123 -85996027 - L2 LINE L2 -778 2536 2520 1956 107 6 41 chr5 113634123 113634442 -85995708 + AluSx SINE Alu 1 308 -4 2976 243 118 40 chr5 113634442 113634820 -85995330 - L2 LINE L2 -794 2520 2173 1930 37 49 4 chr5 113634820 113635063 -85995087 + AluY SINE Alu 1 254 -57 2976 243 118 40 chr5 113635063 113635701 -85994449 - L2 LINE L2 -1141 2173 1420 189 270 87 79 chr5 113636287 113636413 -85993737 - L3 LINE CR1 -260 1317 1191 675 176 0 0 chr5 113636477 113636602 -85993548 - L1MC4 LINE L1 -4 8038 7914 205 246 0 35 chr5 113636612 113636669 -85993481 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 4512 242 120 51 chr5 113636671 113638662 -85991488 - L1MC4a LINE L1 -246 7562 5435 2078 109 0 3 chr5 113639390 113639710 -85990440 - AluSg SINE Alu 0 319 1 249 305 57 71 chr5 113639833 113639974 -85990176 - MIR SINE MIR -72 190 52 1910 150 49 30 chr5 113640201 113640568 -85989582 - THE1C LTR MaLR -1 374 1 23 0 0 0 chr5 113641591 113641614 -85988536 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr5 113642004 113642042 -85988108 + AT_rich Low_complexity Low_complexity 1 38 0 1876 129 17 7 chr5 113642605 113642899 -85987251 - AluSx SINE Alu -13 299 3 306 268 63 21 chr5 113643174 113643364 -85986786 - MER112 DNA MER1_type -55 205 8 7279 43 7 0 chr5 113643468 113644577 -85985573 + L1PA4 LINE L1 5045 6155 0 22 35 0 0 chr5 113644650 113644679 -85985471 + AT_rich Low_complexity Low_complexity 1 29 0 278 244 103 39 chr5 113645137 113645215 -85984935 + L2 LINE L2 3185 3267 -5 221 244 0 0 chr5 113645215 113645260 -85984890 + GA-rich Low_complexity Low_complexity 4 48 0 196 281 0 47 chr5 113645583 113645647 -85984503 + L2 LINE L2 3250 3310 -3 230 343 59 10 chr5 113645998 113646100 -85984050 - L2 LINE L2 -10 3303 3197 805 122 0 54 chr5 113646593 113646740 -85983410 + MER85 DNA T2_type 1 139 0 226 320 77 22 chr5 113646817 113647009 -85983141 - MIR SINE MIR -40 222 18 824 168 91 60 chr5 113647018 113647250 -85982900 + MLT1C LTR MaLR 1 239 -228 23 0 0 0 chr5 113649181 113649204 -85980946 + AT_rich Low_complexity Low_complexity 1 23 0 1913 129 6 25 chr5 113649829 113650147 -85980003 - AluSx SINE Alu 0 312 1 600 190 18 3 chr5 113650423 113650587 -85979563 + MER20 DNA MER1_type 1 219 0 240 326 77 21 chr5 113651422 113651655 -85978495 + L1MC/D LINE L1 5310 5555 -2253 26 50 0 0 chr5 113652153 113652193 -85977957 + AT_rich Low_complexity Low_complexity 1 40 0 2855 208 15 4 chr5 113652813 113653356 -85976794 + Cheshire DNA MER1_type 1 549 -1871 1648 230 43 2 chr5 113653349 113653771 -85976379 + Cheshire DNA MER1_type 1982 2420 0 * 1838 158 0 3 chr5 113654617 113654909 -85975241 - AluSx SINE Alu -21 291 1 331 256 84 79 chr5 113655088 113655303 -85974847 - L1ME1 LINE L1 -229 5937 5722 706 225 12 30 chr5 113655322 113655491 -85974659 - MER69A DNA AcHobo -11 166 1 652 249 108 33 chr5 113655591 113655804 -85974346 + MIR SINE MIR 1 229 -33 35 0 0 0 chr5 113655879 113655914 -85974236 + AT_rich Low_complexity Low_complexity 1 35 0 1145 125 51 9 chr5 113655951 113656167 -85973983 - L1PA10 LINE L1 -4 6164 5940 216 0 0 0 chr5 113656407 113656431 -85973719 + (TA)n Simple_repeat Simple_repeat 2 25 0 2105 116 0 3 chr5 113656431 113656716 -85973434 - AluSx SINE Alu -28 284 1 469 257 90 21 chr5 113656741 113656885 -85973265 + L2 LINE L2 3158 3311 -2 195 42 0 0 chr5 113657202 113657226 -85972924 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 1567 193 18 85 chr5 113657874 113657893 -85972257 - MLT1A2 LTR MaLR 0 374 355 2217 132 34 14 chr5 113657893 113658250 -85971900 - THE1B LTR MaLR 0 364 1 1567 193 18 85 chr5 113658250 113658629 -85971521 - MLT1A2 LTR MaLR -19 355 3 207 208 0 19 chr5 113659329 113659382 -85970768 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 602 333 150 44 chr5 113659519 113660201 -85969949 + L2 LINE L2 1704 2457 -857 1769 172 28 17 chr5 113660255 113660616 -85969534 - MLT1A1 LTR MaLR 0 365 1 322 146 52 0 chr5 113661221 113661317 -85968833 + (TA)n Simple_repeat Simple_repeat 1 101 0 186 313 0 0 chr5 113661385 113661433 -85968717 - MIR SINE MIR -149 113 66 21 0 0 0 chr5 113662231 113662252 -85967898 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr5 113662628 113662662 -85967488 + AT_rich Low_complexity Low_complexity 1 34 0 377 318 13 39 chr5 113663068 113663222 -85966928 - MIR3 SINE MIR -10 198 49 366 257 273 20 chr5 113663325 113663629 -85966521 - L2 LINE L2 -4 3309 2929 205 273 125 62 chr5 113714129 113714257 -85915893 - MIR3 SINE MIR -3 205 70 2682 23 3 0 chr5 113715538 113715843 -85914307 - AluYb8 SINE Alu -11 307 2 212 357 77 18 chr5 113715939 113716107 -85914043 + L2 LINE L2 565 742 -2572 266 259 65 88 chr5 113716173 113716343 -85913807 + MLT1J LTR MaLR 342 507 -4 226 164 16 16 chr5 113716982 113717043 -85913107 + (TA)n Simple_repeat Simple_repeat 2 62 0 650 211 0 0 chr5 113718471 113718594 -85911556 - FLAM_C SINE Alu -20 123 1 1703 168 25 0 chr5 113718721 113719001 -85911149 - AluSx SINE Alu -25 287 1 437 258 159 0 chr5 113719135 113719267 -85910883 + MIR SINE MIR 89 241 -21 1683 116 0 0 chr5 113719698 113719930 -85910220 + AluSq SINE Alu 64 295 -18 189 0 0 0 chr5 113720050 113720071 -85910079 + (TG)n Simple_repeat Simple_repeat 2 22 0 8329 81 29 59 chr5 113720113 113722228 -85907922 - L1PA7 LINE L1 -3 6151 4079 332 221 18 106 chr5 113722338 113722451 -85907699 + MIR3 SINE MIR 85 187 -21 1406 212 49 35 chr5 113723200 113723606 -85906544 - MLT1C LTR MaLR 0 467 56 251 367 110 0 chr5 113724110 113724219 -85905931 + MIR SINE MIR 2 122 -140 25 0 0 0 chr5 113725244 113725269 -85904881 + AT_rich Low_complexity Low_complexity 1 25 0 1542 314 135 56 chr5 113725335 113726114 -85904036 - L2 LINE L2 -855 2459 1743 369 0 0 0 chr5 113726114 113726155 -85903995 + (CA)n Simple_repeat Simple_repeat 1 41 0 1542 314 135 56 chr5 113726155 113726945 -85903205 - L2 LINE L2 -1571 1743 766 301 279 57 33 chr5 113727018 113727140 -85903010 - MER103 DNA DNA -39 127 3 368 219 38 57 chr5 113727528 113727633 -85902517 - MLT1K LTR MaLR -115 473 371 33 25 0 0 chr5 113727786 113727826 -85902324 + AT_rich Low_complexity Low_complexity 1 40 0 222 204 0 0 chr5 113728146 113728195 -85901955 + A-rich Low_complexity Low_complexity 4 52 0 425 306 61 10 chr5 113728465 113728661 -85901489 + L1MCc LINE L1 26 231 -6192 438 312 63 25 chr5 113729277 113729514 -85900636 + L1MCc LINE L1 1129 1374 -5049 1582 163 102 3 chr5 113729875 113730188 -85899962 + L1MC1 LINE L1 5990 6333 0 295 296 102 9 chr5 113731346 113731454 -85898696 - MIR3 SINE MIR -7 201 84 1762 181 3 3 chr5 113731806 113732116 -85898034 - AluJo SINE Alu -1 311 2 363 23 0 0 chr5 113732192 113732236 -85897914 + (CA)n Simple_repeat Simple_repeat 2 45 0 23 0 0 0 chr5 113732610 113732633 -85897517 + AT_rich Low_complexity Low_complexity 1 23 0 245 186 0 0 chr5 113734370 113734429 -85895721 + L1MC4 LINE L1 6647 6705 -1337 25 65 0 0 chr5 113734678 113734724 -85895426 + AT_rich Low_complexity Low_complexity 1 46 0 3638 200 45 10 chr5 113734955 113735958 -85894192 - L1MB5 LINE L1 -189 5985 4951 239 0 0 31 chr5 113735958 113735990 -85894160 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 427 200 0 0 chr5 113735992 113736072 -85894078 - AluJb SINE Alu -196 116 37 24 0 0 0 chr5 113739050 113739074 -85891076 + AT_rich Low_complexity Low_complexity 1 24 0 1975 124 20 3 chr5 113739075 113739373 -85890777 + AluSg SINE Alu 1 303 -7 665 161 34 0 chr5 113739373 113739491 -85890659 - AluJo/FLAM SINE Alu -190 122 1 255 162 0 0 chr5 113739495 113739532 -85890618 - tRNA-Leu-CTT tRNA tRNA -48 37 1 34 84 0 0 chr5 113741167 113741250 -85888900 + AT_rich Low_complexity Low_complexity 1 83 0 27 29 0 0 chr5 113743210 113743244 -85886906 + AT_rich Low_complexity Low_complexity 1 34 0 452 135 0 0 chr5 113743971 113744045 -85886105 - L1MB5 LINE L1 -9 6165 6092 205 175 25 0 chr5 113744964 113745004 -85885146 - L2 LINE L2 -4 3309 3269 298 318 11 11 chr5 113745112 113745200 -85884950 + MIR3 SINE MIR 8 95 -113 2744 115 16 5 chr5 113745371 113745796 -85884354 + L1M1 LINE L1 5327 5756 -547 343 297 95 27 chr5 113745842 113745990 -85884160 - MIR SINE MIR -31 231 74 24 53 0 0 chr5 113746214 113746252 -85883898 + AT_rich Low_complexity Low_complexity 1 38 0 528 45 0 0 chr5 113747142 113747209 -85882941 - L1MB2 LINE L1 -36 6135 6069 21 0 0 0 chr5 113748628 113748649 -85881501 + AT_rich Low_complexity Low_complexity 1 21 0 270 307 9 77 chr5 113748725 113748960 -85881190 + L2 LINE L2 2190 2488 -826 1156 153 0 0 chr5 113749008 113749178 -85880972 + AluJb SINE Alu 121 290 -22 683 306 65 25 chr5 113750402 113750725 -85879425 + L2 LINE L2 2978 3313 0 246 266 21 173 chr5 113750723 113750960 -85879190 - MIR SINE MIR -13 249 49 * 2184 129 3 0 chr5 113751363 113751672 -85878478 + AluSx SINE Alu 1 310 -2 28 0 0 0 chr5 113752147 113752175 -85877975 + AT_rich Low_complexity Low_complexity 1 28 0 186 268 0 0 chr5 113752205 113752246 -85877904 - L2 LINE L2 -4 3309 3269 194 308 84 63 chr5 113752362 113752505 -85877645 - L2 LINE L2 -230 3083 2938 348 250 30 10 chr5 113752587 113752687 -85877463 - L2 LINE L2 -381 2933 2832 359 292 107 18 chr5 113753573 113753741 -85876409 - MIR SINE MIR -40 222 40 2335 94 3 0 chr5 113754460 113754767 -85875383 - AluSg SINE Alu -2 308 1 2045 120 7 10 chr5 113755242 113755541 -85874609 + AluSx SINE Alu 1 298 -14 300 291 25 20 chr5 113755656 113755855 -85874295 + L1MC4a LINE L1 2975 3174 -2972 22 0 0 0 chr5 113755882 113755904 -85874246 + AT_rich Low_complexity Low_complexity 1 22 0 1381 273 74 31 chr5 113755989 113756594 -85873556 + L1MC4a LINE L1 5307 5937 -1871 315 276 70 42 chr5 113756843 113757057 -85873093 + L1ME4a LINE L1 5819 6038 -83 2187 80 0 17 chr5 113757322 113757655 -85872495 - AluY SINE Alu 0 328 1 461 129 14 0 chr5 113758332 113758402 -85871748 + AluJ/FLAM SINE Alu 1 71 -241 216 0 0 0 chr5 113758408 113758432 -85871718 + (A)n Simple_repeat Simple_repeat 1 24 0 27 0 0 0 chr5 113759130 113759157 -85870993 + AT_rich Low_complexity Low_complexity 1 27 0 292 352 56 24 chr5 113762351 113762476 -85867674 - L2 LINE L2 -7 3265 3137 2102 210 62 25 chr5 113762776 113763195 -85866955 + MLT1D LTR MaLR 3 444 -61 3655 68 29 0 chr5 113763195 113763681 -85866469 + L1PA8 LINE L1 5669 6168 -4 2102 210 62 25 chr5 113763681 113763746 -85866404 + MLT1D LTR MaLR 444 505 0 534 346 125 35 chr5 113763746 113764352 -85865798 - L2 LINE L2 -468 2846 2186 1380 138 75 4 chr5 113764755 113764995 -85865155 - Tigger2 DNA MER2_type 0 2718 2462 4463 142 35 3 chr5 113765062 113765783 -85864367 - Tigger2 DNA MER2_type -1974 744 1 1735 174 7 3 chr5 113766094 113766399 -85863751 - AluSx SINE Alu -6 306 1 221 191 0 0 chr5 113766908 113766950 -85863200 + L2 LINE L2 3269 3310 -3 218 270 236 0 chr5 113767561 113767650 -85862500 + MIR SINE MIR 81 190 -72 575 125 71 9 chr5 113767871 113767983 -85862167 - AluJb SINE Alu -193 119 1 221 191 0 0 chr5 113768474 113768516 -85861634 + L2 LINE L2 3269 3310 -3 186 264 264 0 chr5 113769118 113769205 -85860945 + MIR SINE MIR 81 190 -72 24 53 0 0 chr5 113769356 113769394 -85860756 + AT_rich Low_complexity Low_complexity 1 38 0 298 295 74 0 chr5 113769741 113769836 -85860314 - MER5A DNA MER1_type -87 102 1 710 178 59 0 chr5 113770778 113770913 -85859237 - Tigger1 DNA MER2_type -2275 143 1 960 261 80 4 chr5 113771426 113771664 -85858486 - MIR SINE MIR -5 257 2 981 216 0 0 chr5 113771847 113772032 -85858118 + MER5A DNA MER1_type 1 185 -4 228 197 158 13 chr5 113772674 113772750 -85857400 + MIR SINE MIR 104 190 -72 377 283 189 0 chr5 113772811 113772917 -85857233 + L2 LINE L2 3147 3272 0 371 235 113 17 chr5 113773763 113773878 -85856272 - L2 LINE L2 -1 3312 3187 10703 182 15 19 chr5 113775305 113776824 -85853326 - L1PB1 LINE L1 -204 5947 4423 2330 102 0 0 chr5 113776824 113777128 -85853022 + AluSq SINE Alu 1 304 -9 10703 182 15 19 chr5 113777128 113777184 -85852966 - L1PB1 LINE L1 -1728 4423 4368 216 0 0 0 chr5 113777184 113777208 -85852942 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 10703 182 15 19 chr5 113777208 113778787 -85851363 - L1PB1 LINE L1 -1783 4368 2798 21 57 0 0 chr5 113779055 113779090 -85851060 + AT_rich Low_complexity Low_complexity 1 35 0 224 151 0 19 chr5 113780685 113780738 -85849412 + (TA)n Simple_repeat Simple_repeat 2 53 0 200 309 0 0 chr5 113781455 113781510 -85848640 - L3b LINE CR1 -339 1244 1190 23 0 0 0 chr5 113781523 113781546 -85848604 + AT_rich Low_complexity Low_complexity 1 23 0 6980 56 6 41 chr5 113781546 113783255 -85846895 - SVA Other Other -683 1375 1 396 133 0 0 chr5 113783258 113783341 -85846809 + (GGGAGA)n Simple_repeat Simple_repeat 5 87 0 8570 126 18 1 chr5 113783396 113784925 -85845225 - L1P4 LINE L1 -620 5548 3996 8680 93 11 14 chr5 113784928 113786823 -85843327 - L1PA7 LINE L1 -2 6152 4259 1894 60 7 48 chr5 113786823 113787092 -85843058 + AluY SINE Alu 41 298 -13 8680 93 11 14 chr5 113787092 113787260 -85842890 - L1PA7 LINE L1 -1895 4259 4092 289 45 45 0 chr5 113787260 113787304 -85842846 - L1P3 LINE L1 -5468 993 948 4328 88 31 24 chr5 113787405 113787934 -85842216 - L1P LINE L1 -1349 4797 4260 1967 59 4 48 chr5 113787934 113788204 -85841946 + AluY SINE Alu 41 298 -13 4328 88 31 24 chr5 113788204 113788375 -85841775 - L1P LINE L1 -1886 4260 4092 * 6239 131 15 19 chr5 113788360 113789364 -85840786 - L1P3 LINE L1 -5452 1009 10 1881 122 3 0 chr5 113789367 113789661 -85840489 - L1P LINE L1 -2134 4012 3718 23 33 0 0 chr5 113790151 113790181 -85839969 + AT_rich Low_complexity Low_complexity 1 30 0 470 308 72 29 chr5 113790181 113790624 -85839526 - L1ME LINE L1 -371 5791 5331 19574 35 11 2 chr5 113791203 113794396 -85835754 + L1PA4 LINE L1 2918 6152 -3 343 319 52 32 chr5 113794396 113794467 -85835683 + L1M1 LINE L1 5348 5416 -755 1662 201 0 0 chr5 113794467 113794760 -85835390 + AluJo SINE Alu 1 293 -19 343 319 52 32 chr5 113794760 113794968 -85835182 + L1M1 LINE L1 5416 5647 -524 393 241 30 15 chr5 113794975 113795108 -85835042 - MER3 DNA MER1_type -73 136 2 426 282 151 10 chr5 113795115 113795413 -85834737 + L1ME4a LINE L1 5599 5938 -183 28 0 0 0 chr5 113795413 113795441 -85834709 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 113795624 113795646 -85834504 + AT_rich Low_complexity Low_complexity 1 22 0 552 301 144 40 chr5 113795709 113796104 -85834046 - LTR33 LTR ERVL -62 459 24 183 139 0 0 chr5 113796138 113796174 -85833976 + (TG)n Simple_repeat Simple_repeat 2 37 0 198 369 0 29 chr5 113796838 113796941 -85833209 - MIR SINE MIR -69 193 94 2191 118 19 0 chr5 113797023 113797345 -85832805 + THE1B LTR MaLR 37 364 0 492 232 30 43 chr5 113798080 113798244 -85831906 - L1ME1 LINE L1 -6 6160 5999 2170 216 36 36 chr5 113798267 113798850 -85831300 - L1ME1 LINE L1 -235 5931 5349 2120 84 40 0 chr5 113799468 113799770 -85830380 + AluSp SINE Alu 1 313 0 2093 104 48 0 chr5 113799814 113800103 -85830047 - AluSx SINE Alu -9 303 1 293 252 97 0 chr5 113800413 113800516 -85829634 - MLT1G1 LTR MaLR 0 595 483 701 270 21 18 chr5 113800655 113800864 -85829286 - MLT1H LTR MaLR -305 244 40 2240 90 27 0 chr5 113800927 113801226 -85828924 - AluY SINE Alu -4 307 1 183 312 104 72 chr5 113801318 113801539 -85828611 + L2 LINE L2 2309 2536 -778 441 261 51 93 chr5 113801671 113801982 -85828168 - L1ME4a LINE L1 0 6121 5824 216 319 0 0 chr5 113802672 113802741 -85827409 + L2 LINE L2 2895 2963 -350 24 0 0 0 chr5 113803827 113803851 -85826299 + AT_rich Low_complexity Low_complexity 1 24 0 8320 24 1 0 chr5 113803851 113805603 -85824547 - L1PA3 LINE L1 -3 6152 4402 904 47 0 0 chr5 113805603 113805710 -85824440 - U6 snRNA snRNA 0 107 1 388 306 43 89 chr5 113806208 113806443 -85823707 - L2 LINE L2 0 3272 3049 671 211 86 40 chr5 113807539 113807852 -85822298 + MLT1B LTR MaLR 1 390 0 244 306 153 8 chr5 113809260 113809384 -85820766 + MIR SINE MIR 4 145 -117 925 216 23 0 chr5 113810278 113810454 -85819696 + MER5A DNA MER1_type 7 186 -3 21 0 0 0 chr5 113810600 113810621 -85819529 + AT_rich Low_complexity Low_complexity 1 21 0 245 250 174 0 chr5 113810738 113810882 -85819268 + MARNA DNA Mariner 167 335 -251 281 279 59 15 chr5 113812650 113812786 -85817364 - L2 LINE L2 -71 3242 3101 1021 339 85 20 chr5 113812819 113813370 -85816780 + MER115 DNA AcHobo 60 646 -47 262 300 57 0 chr5 113813410 113813480 -85816670 - L2 LINE L2 -232 3081 3008 1391 309 33 26 chr5 113813622 113814231 -85815919 - L2 LINE L2 -452 2862 2250 205 322 35 35 chr5 113814231 113814318 -85815832 + L2 LINE L2 2889 2975 -339 440 240 67 0 chr5 113814472 113814576 -85815574 + L2 LINE L2 3203 3313 0 846 297 42 0 chr5 113814690 113814926 -85815224 - MIR SINE MIR 0 262 17 9469 22 0 0 chr5 113815527 113816629 -85813521 - L1P LINE L1 -1131 5015 3914 2032 90 8 8 chr5 113817482 113817748 -85812402 - AluSq SINE Alu -47 266 1 232 385 11 11 chr5 113819267 113819358 -85810792 + MIR SINE MIR 1 91 -171 412 283 123 23 chr5 113819389 113819667 -85810483 - MER68 LTR ERV1 -7 555 283 652 167 71 16 chr5 113819986 113820016 -85810134 - FLAM_C SINE Alu 0 353 326 1180 28 0 0 chr5 113820016 113820158 -85809992 - L1PA3 LINE L1 0 6155 6014 652 167 71 16 chr5 113820158 113820332 -85809818 - FLAM_C SINE Alu -27 326 1 4007 233 60 23 chr5 113820335 113822154 -85807996 - L1MDb LINE L1 -4614 1792 42 562 203 70 21 chr5 113823162 113823305 -85806845 + LTR16C LTR ERVL 342 491 0 1792 126 14 49 chr5 113824611 113824959 -85805191 - L1MA7 LINE L1 0 6291 5956 228 234 43 0 chr5 113825055 113825102 -85805048 - MER58 DNA MER1_type -2370 50 2 21 0 0 0 chr5 113825696 113825717 -85804433 + AT_rich Low_complexity Low_complexity 1 21 0 2265 216 84 57 chr5 113825724 113825803 -85804347 - L1ME2 LINE L1 -9 6155 6080 1591 94 19 0 chr5 113825803 113826015 -85804135 - AluSc SINE Alu -8 301 86 2265 216 84 57 chr5 113826015 113827064 -85803086 - L1ME2 LINE L1 -84 6080 5006 224 222 30 10 chr5 113827380 113827479 -85802671 + CT-rich Low_complexity Low_complexity 3 103 0 22 0 0 0 chr5 113828750 113828772 -85801378 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 113828927 113828957 -85801193 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 113829523 113829545 -85800605 + AT_rich Low_complexity Low_complexity 1 22 0 6773 278 124 23 chr5 113830078 113833025 -85797125 - L2 LINE L2 -4 3309 80 30 45 0 0 chr5 113834260 113834304 -85795846 + AT_rich Low_complexity Low_complexity 1 44 0 2368 94 0 0 chr5 113834461 113834759 -85795391 + AluSc SINE Alu 2 299 -10 2329 74 0 10 chr5 113834952 113835250 -85794900 - AluY SINE Alu -16 295 1 24 77 0 0 chr5 113835570 113835622 -85794528 + AT_rich Low_complexity Low_complexity 1 52 0 267 211 26 44 chr5 113835809 113835923 -85794227 + (CATATA)n Simple_repeat Simple_repeat 6 117 0 183 179 45 0 chr5 113836021 113836088 -85794062 + (TA)n Simple_repeat Simple_repeat 1 70 0 370 175 25 25 chr5 113836337 113836417 -85793733 - LTR45 LTR ERV1 -2 523 444 23 0 0 0 chr5 113837109 113837132 -85793018 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 113837285 113837315 -85792835 + AT_rich Low_complexity Low_complexity 1 30 0 1854 185 9 9 chr5 113837367 113837708 -85792442 - MER2 DNA MER2_type -2 342 2 871 153 0 15 chr5 113838366 113838503 -85791647 - AluJo SINE Alu -176 136 2 23 0 0 0 chr5 113838883 113838906 -85791244 + AT_rich Low_complexity Low_complexity 1 23 0 445 240 57 70 chr5 113839675 113839904 -85790246 - L1MC/D LINE L1 -1990 5818 5593 1845 241 46 2 chr5 113839911 113840343 -85789807 - MLT1E2 LTR MaLR 0 626 176 444 173 156 69 chr5 113843430 113843603 -85786547 - MLT1E2 LTR MaLR -438 188 1 1370 187 47 13 chr5 113843619 113843875 -85786275 - Charlie1 DNA MER1_type -492 2269 2000 2060 117 13 7 chr5 113843875 113844173 -85785977 + AluSg SINE Alu 1 300 -10 1370 187 47 13 chr5 113844173 113844215 -85785935 - Charlie1 DNA MER1_type -761 2000 1961 2595 217 71 25 chr5 113844234 113844462 -85785688 - L1ME1 LINE L1 -137 6029 5813 2451 50 7 3 chr5 113844462 113844761 -85785389 - AluY SINE Alu -11 300 1 2595 217 71 25 chr5 113844761 113845774 -85784376 - L1ME1 LINE L1 -353 5813 4733 2433 201 25 9 chr5 113845774 113846275 -85783875 + L1 LINE L1 4821 5334 -839 1476 174 30 43 chr5 113846275 113846579 -85783571 + AluJb SINE Alu 1 300 -12 2433 201 25 9 chr5 113846579 113846607 -85783543 + L1 LINE L1 5334 5360 -813 4231 211 36 12 chr5 113846621 113847610 -85782540 + L1MA9 LINE L1 5262 6274 -38 972 257 53 6 chr5 113847612 113847931 -85782219 - L1ME1 LINE L1 -1393 4753 4420 902 242 80 0 chr5 113847946 113848260 -85781890 + L1MB8 LINE L1 3030 3368 -2778 702 134 42 0 chr5 113848263 113848382 -85781768 - FRAM SINE Alu -14 162 39 2597 232 52 21 chr5 113848383 113849158 -85780992 + L1MB8 LINE L1 3374 4172 -1974 2241 97 0 22 chr5 113849491 113849810 -85780340 - AluSx SINE Alu 0 312 1 1663 70 0 23 chr5 113850089 113850304 -85779846 + AluSc SINE Alu 77 286 -23 2200 230 108 8 chr5 113850449 113851061 -85779089 + L1MB8 LINE L1 5490 6159 -7 445 246 0 49 chr5 113851084 113851206 -85778944 + MIR SINE MIR 26 141 -121 1971 110 0 7 chr5 113851209 113851481 -85778669 + AluSc SINE Alu 36 305 -4 242 56 28 0 chr5 113851508 113851544 -85778606 + (TG)n Simple_repeat Simple_repeat 2 38 0 206 245 19 0 chr5 113851544 113851597 -85778553 + (CATATA)n Simple_repeat Simple_repeat 4 57 0 207 247 22 90 chr5 113852190 113852279 -85777871 - MIR SINE MIR -110 152 70 270 0 0 0 chr5 113852793 113852823 -85777327 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 1833 164 0 10 chr5 113853011 113853309 -85776841 + AluSx SINE Alu 1 295 -17 25 31 0 0 chr5 113855729 113855761 -85774389 + AT_rich Low_complexity Low_complexity 1 32 0 353 205 13 0 chr5 113856346 113856424 -85773726 + AluJ/FLAM SINE Alu 2 80 -222 513 337 131 25 chr5 113857517 113857947 -85772203 - L2 LINE L2 -15 3257 2788 405 102 0 0 chr5 113857998 113858057 -85772093 + (TTG)n Simple_repeat Simple_repeat 2 60 0 343 221 123 36 chr5 113858192 113858387 -85771763 - L1MC4a LINE L1 -1800 6008 5797 21 0 0 0 chr5 113858669 113858690 -85771460 + AT_rich Low_complexity Low_complexity 1 21 0 2091 121 0 0 chr5 113858951 113859249 -85770901 - AluSg SINE Alu -9 301 4 471 333 114 0 chr5 113859379 113859580 -85770570 + MIR SINE MIR 29 252 -10 216 312 110 9 chr5 113861315 113861424 -85768726 - MIR SINE MIR -110 152 33 1478 224 17 19 chr5 113861879 113862240 -85767910 - L1MD3 LINE L1 -183 7812 7453 399 94 0 167 chr5 113863092 113863188 -85766962 + MADE1 DNA Mariner 1 80 0 1626 225 52 48 chr5 113863472 113863930 -85766220 - MLT1C LTR MaLR 0 467 8 480 179 0 4 chr5 113864468 113864612 -85765538 + MER8 DNA MER2_type 40 238 -1 22 35 0 0 chr5 113864658 113864687 -85765463 + AT_rich Low_complexity Low_complexity 1 29 0 684 280 59 21 chr5 113864880 113865116 -85765034 - MIR SINE MIR -16 246 2 2329 75 20 0 chr5 113866199 113866493 -85763657 - AluY SINE Alu -11 300 1 1764 157 3 29 chr5 113867196 113867508 -85762642 - AluJb SINE Alu -8 304 1 230 281 0 0 chr5 113868685 113868742 -85761408 - MIR SINE MIR -101 161 105 35 54 0 0 chr5 113871161 113871217 -85758933 + AT_rich Low_complexity Low_complexity 1 56 0 264 392 67 0 chr5 113871842 113871962 -85758188 - MIR3 SINE MIR -27 181 54 714 329 46 11 chr5 113874056 113874339 -85755811 - L3 LINE CR1 -892 685 393 1028 235 43 4 chr5 113874378 113874775 -85755375 + LTR40c LTR ERVL 1 465 0 607 235 50 59 chr5 113874775 113875013 -85755137 - L1ME3A LINE L1 -17 6153 5918 * 5696 258 78 39 chr5 113875011 113875157 -85754993 - L1ME3A LINE L1 -743 5403 5264 686 117 17 33 chr5 113875157 113875277 -85754873 + L1MB2 LINE L1 6052 6169 -2 5696 258 78 39 chr5 113875277 113877545 -85752605 - L1ME3A LINE L1 -882 5264 2862 1987 162 71 0 chr5 113877545 113877909 -85752241 - MLT1B LTR MaLR 0 390 1 5696 258 78 39 chr5 113877909 113878312 -85751838 - L1ME3A LINE L1 -3284 2862 2476 317 306 105 36 chr5 113878713 113878932 -85751218 - MER112 DNA MER1_type -6 254 21 680 346 86 25 chr5 113880277 113880673 -85749477 + L1M3c LINE L1 3 422 -5719 2036 254 35 11 chr5 113881073 113881695 -85748455 + L1M3c LINE L1 917 1553 -4588 1972 258 70 48 chr5 113881685 113882505 -85747645 + MLT-int LTR MaLR 441 1328 -407 * 308 217 14 0 chr5 113882585 113882654 -85747496 + MLT1A1 LTR MaLR 47 116 -249 24 32 0 0 chr5 113882654 113882685 -85747465 + AT_rich Low_complexity Low_complexity 1 31 0 291 207 0 186 chr5 113882756 113882896 -85747254 + MLT1A1 LTR MaLR 161 274 -91 4151 203 41 22 chr5 113882902 113884050 -85746100 + L1MB2 LINE L1 5005 6169 -2 23 54 0 0 chr5 113884247 113884284 -85745866 + AT_rich Low_complexity Low_complexity 1 37 0 325 238 157 41 chr5 113885083 113885230 -85744920 - MER46A DNA MER2_type -70 166 3 * 991 147 173 10 chr5 113885101 113885298 -85744852 + MER46A DNA MER2_type 1 229 -7 1081 217 18 9 chr5 113885318 113885539 -85744611 - MER58A DNA MER1_type 0 224 2 361 260 0 0 chr5 113885600 113885673 -85744477 + MIR3 SINE MIR 121 193 -15 22 0 0 0 chr5 113887049 113887071 -85743079 + AT_rich Low_complexity Low_complexity 1 22 0 298 341 115 16 chr5 113887444 113887626 -85742524 - MLT1K LTR MaLR -366 222 23 185 128 21 0 chr5 113887727 113887774 -85742376 + (TA)n Simple_repeat Simple_repeat 1 48 0 382 313 203 18 chr5 113887792 113888009 -85742141 - MIR SINE MIR 0 262 6 615 204 22 0 chr5 113890018 113890155 -85739995 + MER3 DNA MER1_type 31 123 -86 1273 140 70 73 chr5 113890156 113890541 -85739609 + MER3 DNA MER1_type 2234 2617 0 412 275 129 12 chr5 113893139 113893310 -85736840 + MER117 DNA MER1_type 7 197 0 2462 60 0 3 chr5 113895513 113895813 -85734337 - AluY SINE Alu -12 299 1 423 0 0 0 chr5 113896001 113896048 -85734102 + (TG)n Simple_repeat Simple_repeat 2 48 0 197 81 0 27 chr5 113896242 113896279 -85733871 + (TAAAA)n Simple_repeat Simple_repeat 1 36 0 254 310 92 0 chr5 113896365 113896452 -85733698 - MIR SINE MIR -78 130 36 263 254 0 45 chr5 113896520 113896587 -85733563 - MIR SINE MIR -2 260 197 338 293 40 10 chr5 113896594 113896693 -85733457 + L2 LINE L2 3193 3294 -19 462 312 32 7 chr5 113896712 113896866 -85733284 - MIR SINE MIR -103 159 2 1784 127 14 3 chr5 113898094 113898378 -85731772 - L1PA14 LINE L1 0 6161 5875 544 260 136 0 chr5 113898881 113899050 -85731100 - MIR SINE MIR -11 251 60 303 303 11 11 chr5 113899870 113899959 -85730191 + MIR SINE MIR 8 96 -166 300 293 0 0 chr5 113900044 113900126 -85730024 + (TA)n Simple_repeat Simple_repeat 1 82 0 303 297 125 8 chr5 113900143 113900271 -85729879 + L2 LINE L2 3171 3313 0 197 196 137 0 chr5 113900272 113900323 -85729827 + MIR SINE MIR 97 154 -108 610 279 180 35 chr5 113900903 113901347 -85728803 - L2 LINE L2 -41 3272 2754 1154 22 0 0 chr5 113901420 113901558 -85728592 - L1PA4 LINE L1 -3 6152 6015 269 318 47 0 chr5 113901642 113901727 -85728423 - L2 LINE L2 -20 3252 3164 568 104 0 0 chr5 113902219 113902296 -85727854 - MADE1 DNA Mariner -1 79 3 1608 128 219 17 chr5 113902317 113902668 -85727482 - MSTA LTR MaLR -3 425 4 235 294 65 11 chr5 113904394 113904486 -85725664 + L2 LINE L2 3155 3251 -21 22 35 0 0 chr5 113905130 113905159 -85724991 + AT_rich Low_complexity Low_complexity 1 29 0 758 233 48 34 chr5 113905306 113905512 -85724638 - MER58A DNA MER1_type -12 212 4 183 220 0 0 chr5 113905729 113905779 -85724371 + CT-rich Low_complexity Low_complexity 4 53 0 25 31 0 0 chr5 113905864 113905896 -85724254 + AT_rich Low_complexity Low_complexity 1 32 0 210 358 83 0 chr5 113905998 113906118 -85724032 - L2 LINE L2 -706 2608 2479 288 0 0 0 chr5 113906422 113906454 -85723696 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr5 113906697 113906720 -85723430 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 113907195 113907223 -85722927 + AT_rich Low_complexity Low_complexity 1 28 0 17655 31 3 3 chr5 113908312 113910477 -85719673 - L1P LINE L1 -1529 4617 2452 14718 172 27 16 chr5 113910473 113913926 -85716224 - L1M1 LINE L1 -735 6989 3480 * 2296 74 3 3 chr5 113913926 113914223 -85715927 - AluY SINE Alu -14 297 1 14718 172 27 16 chr5 113914223 113914500 -85715650 - L1M1 LINE L1 -4244 3480 3208 1646 164 25 14 chr5 113914721 113915001 -85715149 + AluJb SINE Alu 6 288 -24 315 0 0 0 chr5 113915356 113915391 -85714759 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2578 55 0 0 chr5 113915533 113915841 -85714309 + AluY SINE Alu 1 308 -3 309 262 165 0 chr5 113916321 113916424 -85713726 + MIR SINE MIR 132 251 -11 29 28 0 0 chr5 113917272 113917308 -85712842 + AT_rich Low_complexity Low_complexity 1 36 0 349 314 188 36 chr5 113917414 113917723 -85712427 - L2 LINE L2 -1 3312 2957 2114 102 6 19 chr5 113918160 113918473 -85711677 - AluSc SINE Alu 0 309 1 185 182 30 0 chr5 113919286 113919319 -85710831 - L3b LINE CR1 -271 1312 1279 21 89 0 0 chr5 113919478 113919534 -85710616 + AT_rich Low_complexity Low_complexity 1 56 0 387 268 89 38 chr5 113919539 113919752 -85710398 + L1ME LINE L1 4577 4800 -1346 570 283 36 9 chr5 113920456 113920679 -85709471 + L1ME LINE L1 5521 5749 -372 21 0 0 0 chr5 113920748 113920769 -85709381 + AT_rich Low_complexity Low_complexity 1 21 0 1011 162 32 176 chr5 113921198 113921574 -85708576 - MER33 DNA MER1_type -2 322 1 285 236 225 11 chr5 113921577 113921666 -85708484 + L2 LINE L2 3192 3299 -14 338 349 74 34 chr5 113922018 113922368 -85707782 - L3b LINE CR1 -86 1497 1134 239 263 147 21 chr5 113922749 113922844 -85707306 + MIR SINE MIR 156 262 0 467 205 134 0 chr5 113923110 113923222 -85706928 - L2 LINE L2 0 3313 3187 25 0 0 0 chr5 113925211 113925236 -85704914 + AT_rich Low_complexity Low_complexity 1 25 0 386 319 22 0 chr5 113925688 113925779 -85704371 + L2 LINE L2 3132 3224 -48 1085 208 33 17 chr5 113925963 113926204 -85703946 - MIR SINE MIR 0 262 18 335 191 15 0 chr5 113926233 113926301 -85703849 - MER116 DNA Mariner -11 69 1 1734 128 0 110 chr5 113926744 113927079 -85703071 + AluSx SINE Alu 2 299 -3 247 233 150 0 chr5 113927376 113927436 -85702714 - MIR SINE MIR -71 191 123 468 219 69 2 chr5 113929055 113929277 -85700873 + L1MA9 LINE L1 5959 6290 -22 445 303 56 80 chr5 113929516 113929889 -85700261 - L2 LINE L2 -680 2634 2271 879 97 0 0 chr5 113930108 113930232 -85699918 - AluY SINE Alu -2 309 186 575 300 138 16 chr5 113932248 113932611 -85697539 - MLT1I LTR MaLR 0 409 3 244 346 13 0 chr5 113933308 113933386 -85696764 - L2 LINE L2 -3 3310 3232 346 265 66 24 chr5 113934296 113934462 -85695688 + L2 LINE L2 3021 3193 -120 237 33 0 0 chr5 113934466 113934496 -85695654 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 506 169 0 0 chr5 113934499 113934588 -85695562 - FLAM_A SINE Alu -35 107 19 194 81 27 0 chr5 113934621 113934658 -85695492 + (TA)n Simple_repeat Simple_repeat 2 39 0 269 257 71 14 chr5 113934749 113934819 -85695331 + L2 LINE L2 3178 3251 -62 200 125 75 0 chr5 113935359 113935399 -85694751 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 642 63 48 0 chr5 113936951 113937077 -85693073 + (TA)n Simple_repeat Simple_repeat 2 133 0 756 293 72 54 chr5 113937965 113938464 -85691686 + L1ME4a LINE L1 5382 5889 -232 240 35 0 0 chr5 113938562 113938591 -85691559 + (TA)n Simple_repeat Simple_repeat 1 29 0 240 59 0 0 chr5 113938591 113938625 -85691525 + (GA)n Simple_repeat Simple_repeat 1 34 0 1989 141 3 6 chr5 113940628 113940941 -85689209 + MER1B DNA MER1_type 28 339 0 306 228 87 11 chr5 113944119 113944211 -85685939 + HAL1b LINE L1 1247 1345 -3 736 194 222 9 chr5 113944401 113944617 -85685533 - MIR SINE MIR 0 262 1 280 258 0 0 chr5 113944625 113944687 -85685463 + MIR SINE MIR 92 153 -55 252 120 0 4 chr5 113945467 113945512 -85684638 - MLT1D LTR MaLR 0 626 462 243 228 87 87 chr5 113945616 113945708 -85684442 - MLT1I LTR MaLR -2 407 316 252 257 86 0 chr5 113945910 113945980 -85684170 - MLT1I LTR MaLR -300 109 34 732 364 85 18 chr5 113946314 113946762 -85683388 + L3 LINE CR1 60 537 -1040 629 340 183 22 chr5 113946816 113947695 -85682455 - L2 LINE L2 -497 2817 1797 3243 200 126 6 chr5 113997923 113998831 -85631319 + L1 LINE L1 2219 3235 -2911 13371 46 10 1 chr5 113998909 114000722 -85629428 - L1P3 LINE L1 -597 5557 3731 2409 228 17 41 chr5 114000864 114001448 -85628702 - L1M3e LINE L1 -6460 570 1 251 250 28 14 chr5 114001454 114001526 -85628624 - MLT2C1 LTR ERVL -324 73 1 266 352 8 8 chr5 114001661 114001786 -85628364 + MIR3 SINE MIR 77 201 -7 7949 35 2 1 chr5 114002667 114003705 -85626445 - L1HS LINE L1 0 6155 5116 1369 153 85 53 chr5 114003921 114004441 -85625709 - MER54A LTR ERVL -162 482 73 1306 196 38 0 chr5 114004442 114004682 -85625468 + AluJb SINE Alu 1 249 -63 601 75 32 21 chr5 114004682 114004776 -85625374 - MER54A LTR ERVL -806 95 1 715 58 0 0 chr5 114005269 114005356 -85624794 + AluSp/q SINE Alu 207 293 -20 210 286 41 10 chr5 114006008 114006106 -85624044 - L2 LINE L2 -705 2609 2509 309 102 0 20 chr5 114007145 114007194 -85622956 + MSTA LTR MaLR 8 55 -373 914 136 93 0 chr5 114007200 114007362 -85622788 + MSTA-int LTR MaLR 1475 1651 0 2032 182 20 48 chr5 114007362 114007541 -85622609 + MSTA LTR MaLR 1 183 -245 2232 86 3 43 chr5 114007541 114007761 -85622389 + L1PB1 LINE L1 5814 6016 -135 2511 50 7 3 chr5 114007761 114008062 -85622088 + AluY SINE Alu 1 302 -9 2232 86 3 43 chr5 114008062 114008189 -85621961 + L1PB1 LINE L1 6016 6147 -4 2032 182 20 48 chr5 114008189 114008449 -85621701 + MSTA LTR MaLR 183 428 0 200 273 80 80 chr5 114008471 114008565 -85621585 + L2 LINE L2 3156 3252 -61 2185 189 108 36 chr5 114008565 114009146 -85621004 + MLT1E3 LTR MaLR 2 624 0 200 273 80 80 chr5 114009146 114009201 -85620949 + L2 LINE L2 3251 3305 -8 2532 96 33 6 chr5 114009653 114010018 -85620132 + THE1C LTR MaLR 1 375 0 374 238 0 0 chr5 114014687 114014767 -85615383 - HAL1 LINE L1 -882 1625 1546 1132 189 33 0 chr5 114014857 114015069 -85615081 - MER20 DNA MER1_type 0 219 1 1385 201 146 23 chr5 114015098 114015524 -85614626 + MLT1D LTR MaLR 1 497 -8 602 352 31 31 chr5 114015598 114015984 -85614166 + ERVL LTR ERVL 4677 5062 -702 558 292 55 66 chr5 114016381 114016836 -85613314 + LTR16A LTR ERVL 1 450 0 1684 196 67 58 chr5 114016836 114017332 -85612818 + L1ME2 LINE L1 5662 6161 -3 2156 118 16 0 chr5 114019205 114019509 -85610641 + AluSp SINE Alu 1 309 -4 330 243 0 0 chr5 114019512 114019615 -85610535 + A-rich Low_complexity Low_complexity 1 103 0 2152 124 7 0 chr5 114020502 114020800 -85609350 + AluSx SINE Alu 1 300 -12 765 243 131 74 chr5 114021000 114021551 -85608599 + MLT1K LTR MaLR 3 584 -4 1133 129 12 6 chr5 114022105 114022276 -85607874 - AluSg/x SINE Alu -13 297 126 542 217 161 0 chr5 114022598 114022759 -85607391 + LTR33 LTR ERVL 3 189 -332 348 269 135 21 chr5 114022766 114022959 -85607191 + LTR33 LTR ERVL 290 504 -17 234 238 24 24 chr5 114024718 114024802 -85605348 - L3b LINE CR1 -247 1336 1253 454 254 18 18 chr5 114024904 114025018 -85605132 + MLT1K LTR MaLR 327 440 -148 402 306 40 23 chr5 114025098 114025271 -85604879 - MER5B DNA MER1_type -2 176 1 242 357 83 6 chr5 114025330 114025487 -85604663 - L3 LINE CR1 -129 1448 1280 1706 158 36 7 chr5 114026474 114026753 -85603397 + AluJo SINE Alu 1 287 -25 210 281 207 44 chr5 114029153 114029642 -85600508 - L2 LINE L2 0 3313 2740 448 284 45 23 chr5 114030956 114031132 -85599018 - L2 LINE L2 -1348 1966 1787 1298 263 51 44 chr5 114033348 114033758 -85596392 - LTR16C LTR ERVL 0 491 79 219 186 0 0 chr5 114033843 114033886 -85596264 + CT-rich Low_complexity Low_complexity 1 43 0 200 114 86 0 chr5 114033989 114034024 -85596126 - MIR SINE MIR -10 252 215 3425 96 29 45 chr5 114035020 114035582 -85594568 - L1MA2 LINE L1 0 6304 5752 2482 116 26 13 chr5 114035582 114035954 -85594196 - L1PB3 LINE L1 -1 6153 5769 5636 120 36 17 chr5 114035954 114036968 -85593182 - L1PA13 LINE L1 -20 6143 5102 1635 96 0 17 chr5 114036968 114037226 -85592924 - AluSc SINE Alu 0 309 64 5636 120 36 17 chr5 114037226 114037284 -85592866 - L1PA13 LINE L1 -1061 5102 5047 207 271 28 37 chr5 114037481 114037588 -85592562 - L2 LINE L2 -280 3033 2928 311 264 90 21 chr5 114037887 114038031 -85592119 - MLT1K LTR MaLR -310 278 125 26 0 0 0 chr5 114038524 114038550 -85591600 + AT_rich Low_complexity Low_complexity 1 26 0 311 333 29 0 chr5 114038905 114039010 -85591140 + MIR SINE MIR 104 211 -51 468 258 44 31 chr5 114039025 114039184 -85590966 - ERVL LTR ERVL -3438 2326 2166 679 247 179 38 chr5 114039855 114040252 -85589898 - LTR16A1 LTR ERVL 0 457 5 655 330 51 28 chr5 114040515 114040945 -85589205 - L2 LINE L2 -337 2977 2538 613 266 101 51 chr5 114040961 114041198 -85588952 - MER112 DNA MER1_type -11 249 1 575 298 64 16 chr5 114042373 114042561 -85587589 + MIR SINE MIR 22 218 -44 312 304 0 82 chr5 114042663 114042798 -85587352 - MIR SINE MIR -63 145 22 21 0 0 0 chr5 114042846 114042867 -85587283 + AT_rich Low_complexity Low_complexity 1 21 0 193 194 28 0 chr5 114047040 114047076 -85583074 + MIR SINE MIR 116 152 -110 311 288 169 25 chr5 114047566 114047726 -85582424 - MIR SINE MIR -60 202 20 2936 225 62 39 chr5 114047816 114048688 -85581462 - L1ME1 LINE L1 -19 6147 5257 352 306 42 14 chr5 114048690 114048834 -85581316 - L1ME LINE L1 -5920 150 3 478 265 41 55 chr5 114048879 114049098 -85581052 + L1M4c LINE L1 1413 1628 -4756 651 259 32 27 chr5 114049678 114049898 -85580252 - LTR33 LTR ERVL -9 512 292 29187 39 37 2 chr5 114050314 114053888 -85576262 + L1PA5 LINE L1 1 3698 -2448 3625 246 184 28 chr5 114054044 114055149 -85575001 + L1MA8 LINE L1 537 1468 -5638 5293 49 3 2 chr5 114055149 114055764 -85574386 + L1PA5 LINE L1 5539 6154 0 3625 246 184 28 chr5 114055764 114057140 -85573010 + L1MA8 LINE L1 1468 3140 -3966 5497 67 25 1 chr5 114057289 114058007 -85572143 - L1P LINE L1 -1470 4676 3942 4972 50 3 0 chr5 114058007 114058583 -85571567 + L1PA7 LINE L1 5570 6148 -6 5699 169 65 10 chr5 114058583 114060889 -85569261 + L1MA8 LINE L1 4336 7251 0 332 231 46 37 chr5 114060899 114061007 -85569143 + MLT2C1 LTR ERVL 60 168 -229 515 274 37 37 chr5 114061184 114061348 -85568802 - MIR SINE MIR -90 172 9 406 284 19 37 chr5 114062761 114062923 -85567227 + MLT1J2 LTR MaLR 1 159 -291 349 265 86 17 chr5 114062959 114063113 -85567037 + MLT1J2 LTR MaLR 279 401 -8 207 0 0 0 chr5 114063649 114063672 -85566478 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 44455 44 3 1 chr5 114063715 114069852 -85560298 - L1PA4 LINE L1 0 6155 1 213 132 26 0 chr5 114070405 114070443 -85559707 + A-rich Low_complexity Low_complexity 4 42 0 25 0 0 0 chr5 114070691 114070716 -85559434 + AT_rich Low_complexity Low_complexity 1 25 0 27 49 0 0 chr5 114070771 114070812 -85559338 + AT_rich Low_complexity Low_complexity 1 41 0 524 189 11 21 chr5 114070821 114070916 -85559234 - FLAM_C SINE Alu -36 107 14 227 250 130 0 chr5 114074064 114074172 -85555978 - L1ME4a LINE L1 -45 6076 5955 331 106 0 0 chr5 114074173 114074220 -85555930 - Alu SINE Alu -255 47 1 295 289 16 16 chr5 114074318 114074439 -85555711 + MIR SINE MIR 108 228 -34 1967 147 0 0 chr5 114074921 114075206 -85554944 + AluSx SINE Alu 11 295 -17 189 195 0 0 chr5 114075214 114075255 -85554895 + (TA)n Simple_repeat Simple_repeat 1 41 0 323 299 108 25 chr5 114075372 114075529 -85554621 - MLT1K LTR MaLR -114 474 305 457 276 86 104 chr5 114075534 114076091 -85554059 - LTR67 LTR ERVL -6 551 5 1360 170 23 23 chr5 114077268 114077527 -85552623 + AluJb SINE Alu 1 259 -53 1668 176 0 7 chr5 114077540 114077818 -85552332 + AluJb SINE Alu 24 299 -13 403 206 12 106 chr5 114077818 114077978 -85552172 - L1M4 LINE L1 -3316 2830 2686 1934 116 3 51 chr5 114078115 114078426 -85551724 + AluSx SINE Alu 1 296 -16 361 132 0 0 chr5 114078941 114078994 -85551156 + MADE1 DNA Mariner 1 53 -27 43430 37 22 1 chr5 114079465 114085487 -85544663 + L1PA3 LINE L1 2 6155 0 2563 50 0 3 chr5 114085676 114085977 -85544173 + AluY SINE Alu 1 300 -11 25 65 0 0 chr5 114086086 114086132 -85544018 + AT_rich Low_complexity Low_complexity 1 46 0 479 133 0 0 chr5 114087719 114087802 -85542348 + L1MC3 LINE L1 7589 7671 -114 787 139 86 20 chr5 114087915 114088066 -85542084 - FRAM SINE Alu -5 161 1 551 155 12 8 chr5 114088180 114088316 -85541834 - L1M2 LINE L1 -858 5433 5295 27 29 0 0 chr5 114088322 114088356 -85541794 + AT_rich Low_complexity Low_complexity 1 34 0 3524 141 103 140 chr5 114088366 114088938 -85541212 - L1MC3 LINE L1 -21 7764 7154 238 340 0 0 chr5 114088938 114089035 -85541115 - MLT1K LTR MaLR -434 133 37 3524 141 103 140 chr5 114089035 114089499 -85540651 - L1MC3 LINE L1 -631 7154 6674 5291 269 47 34 chr5 114089761 114091552 -85538598 - L1MEc LINE L1 -1489 4726 2959 2050 117 7 0 chr5 114091552 114091861 -85538289 - AluSx SINE Alu 0 311 1 5291 269 47 34 chr5 114091861 114092442 -85537708 - L1MEc LINE L1 -3256 2959 2344 2067 112 21 0 chr5 114092442 114092728 -85537422 - AluSq SINE Alu -21 292 1 5291 269 47 34 chr5 114092728 114093182 -85536968 - L1MEc LINE L1 -3871 2344 1897 3587 248 64 28 chr5 114093303 114093383 -85536767 - L1M4 LINE L1 -2229 3917 3841 2285 107 0 0 chr5 114093383 114093682 -85536468 + AluSx SINE Alu 1 299 -13 2066 104 11 0 chr5 114093691 114093994 -85536156 - AluSx SINE Alu 0 306 1 3587 248 64 28 chr5 114093994 114095227 -85534923 - L1M4 LINE L1 -2312 3834 2545 591 288 67 25 chr5 114095228 114095606 -85534544 + MLT1J LTR MaLR 36 482 -29 43 85 0 0 chr5 114095739 114095845 -85534305 + AT_rich Low_complexity Low_complexity 1 106 0 27 29 0 0 chr5 114096060 114096094 -85534056 + AT_rich Low_complexity Low_complexity 1 34 0 1701 170 75 109 chr5 114096163 114096351 -85533799 - MLT1D LTR MaLR 0 505 312 1934 157 6 10 chr5 114096351 114096663 -85533487 - AluJo SINE Alu 0 312 2 1701 170 75 109 chr5 114096663 114096880 -85533270 - MLT1D LTR MaLR -193 312 119 2161 111 3 3 chr5 114096880 114097186 -85532964 - AluSq SINE Alu -6 307 2 1701 170 75 109 chr5 114097186 114097302 -85532848 - MLT1D LTR MaLR -386 119 1 3214 67 14 11 chr5 114098202 114098638 -85531512 + L1PA10 LINE L1 5728 6164 -4 1998 157 3 0 chr5 114099522 114099816 -85530334 - AluJo SINE Alu -17 295 1 21 0 0 0 chr5 114099863 114099884 -85530266 + AT_rich Low_complexity Low_complexity 1 21 0 219 167 0 0 chr5 114100035 114100077 -85530073 + (TG)n Simple_repeat Simple_repeat 1 42 0 182 350 17 0 chr5 114100106 114100166 -85529984 - L2 LINE L2 -66 3206 3146 3820 121 7 21 chr5 114100231 114101064 -85529086 - LTR8-int LTR ERV1 -3611 1343 499 2108 99 7 11 chr5 114101064 114101348 -85528802 + AluSq SINE Alu 1 283 -30 495 0 0 0 chr5 114101351 114101406 -85528744 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 3820 121 7 21 chr5 114101406 114101749 -85528401 - LTR8-int LTR ERV1 -4457 497 1 3147 107 23 35 chr5 114101749 114101855 -85528295 - MER84 LTR ERVI 0 507 401 4802 116 0 17 chr5 114101855 114102556 -85527594 - LTR8 LTR ERV1 -2 689 1 3147 107 23 35 chr5 114102556 114102807 -85527343 - MER84 LTR ERVI -106 401 155 2445 61 0 16 chr5 114102807 114103119 -85527031 + AluY SINE Alu 1 307 -4 3147 107 23 35 chr5 114103119 114103273 -85526877 - MER84 LTR ERVI -352 155 1 438 263 181 6 chr5 114103306 114103477 -85526673 - MIR SINE MIR -1 261 61 2104 107 14 0 chr5 114103491 114103782 -85526368 - AluSx SINE Alu -17 295 1 1230 101 0 0 chr5 114103873 114104031 -85526119 + AluSq SINE Alu 134 291 -22 198 317 188 38 chr5 114104045 114104231 -85525919 + L3 LINE CR1 1345 1558 -19 687 25 0 0 chr5 114104315 114104396 -85525754 + (TA)n Simple_repeat Simple_repeat 1 81 0 2263 97 0 0 chr5 114104396 114104694 -85525456 - AluSc SINE Alu -11 298 1 625 245 137 106 chr5 114104782 114105301 -85524849 + LTR67 LTR ERVL 3 537 -20 21 36 0 0 chr5 114105558 114105586 -85524564 + AT_rich Low_complexity Low_complexity 1 28 0 986 165 44 76 chr5 114105879 114106195 -85523955 - MER33 DNA MER1_type -10 314 9 2293 85 0 0 chr5 114106306 114106613 -85523537 + AluSx SINE Alu 1 307 0 363 321 95 6 chr5 114106689 114106857 -85523293 + HAL1 LINE L1 715 897 -1610 360 103 0 0 chr5 114106961 114107019 -85523131 + Alu SINE Alu 243 300 -2 323 228 162 94 chr5 114107092 114107137 -85523013 + HAL1 LINE L1 1053 1093 -1414 2186 133 3 3 chr5 114107137 114107446 -85522704 + AluSx SINE Alu 1 309 -3 323 228 162 94 chr5 114107446 114107795 -85522355 + HAL1 LINE L1 1093 1474 -1033 449 335 22 6 chr5 114109012 114109194 -85520956 + L1ME LINE L1 166 350 -5855 243 301 41 34 chr5 114109284 114109430 -85520720 + L1ME LINE L1 299 445 -5951 303 248 184 18 chr5 114109804 114109913 -85520237 + MLT1J1 LTR MaLR 194 320 -126 326 311 0 19 chr5 114110038 114110141 -85520009 - MIR SINE MIR -80 182 82 662 266 14 22 chr5 114110155 114110430 -85519720 - L1M4 LINE L1 -2689 3955 3683 * 2029 179 28 77 chr5 114110421 114110910 -85519240 - L1M4 LINE L1 -5480 1062 550 2042 146 76 15 chr5 114110910 114111252 -85518898 - THE1B LTR MaLR -1 363 1 11340 91 31 1 chr5 114111252 114112786 -85517364 - THE1B-int LTR MaLR 0 1580 1 2069 146 76 15 chr5 114112786 114113129 -85517021 - THE1B LTR MaLR 0 364 1 2029 179 28 77 chr5 114113129 114113180 -85516970 - L1M4 LINE L1 -5989 553 547 1559 190 162 42 chr5 114113262 114113724 -85516426 + MER66B LTR ERV1 100 486 0 1879 214 66 23 chr5 114113725 114114254 -85515896 - L1M4 LINE L1 -5989 553 2 754 176 39 122 chr5 114114318 114114442 -85515708 - MER5A DNA MER1_type -1 188 86 2069 125 23 3 chr5 114114442 114114746 -85515404 - AluSx SINE Alu -2 310 1 754 176 39 122 chr5 114114746 114114826 -85515324 - MER5A DNA MER1_type -103 86 1 481 289 83 33 chr5 114114941 114115183 -85514967 - MIR SINE MIR 0 262 9 1080 271 56 7 chr5 114115183 114115596 -85514554 - MER113 DNA MER1_type? 0 521 89 305 129 0 16 chr5 114117099 114117161 -85512989 + (CCG)n Simple_repeat Simple_repeat 3 63 0 240 266 49 66 chr5 114118575 114118801 -85511349 - L1MC/D LINE L1 -1898 5910 5689 249 224 40 13 chr5 114118967 114119043 -85511107 - L1MC/D LINE L1 -456 5665 5588 281 276 47 16 chr5 114119132 114119259 -85510891 - L1MC/D LINE L1 -1529 4617 4487 393 275 44 96 chr5 114119473 114119724 -85510426 - L1MC/D LINE L1 -1945 4201 3964 5765 217 133 53 chr5 114119886 114120763 -85509387 - L1ME2 LINE L1 -9 6950 6144 2440 60 10 0 chr5 114120763 114121062 -85509088 + AluY SINE Alu 1 302 -9 5765 217 133 53 chr5 114121062 114122272 -85507878 - L1ME2 LINE L1 -815 6144 5031 1781 159 41 41 chr5 114122272 114122559 -85507591 + MLT1A1 LTR MaLR 1 290 -75 2191 112 23 0 chr5 114122559 114122864 -85507286 - AluSx SINE Alu 0 312 1 1781 159 41 41 chr5 114122864 114122941 -85507209 + MLT1A1 LTR MaLR 289 365 0 5765 217 133 53 chr5 114122941 114122996 -85507154 - L1ME2 LINE L1 -1928 5031 4982 2043 111 4 7 chr5 114122996 114123312 -85506838 - AluSg SINE Alu 0 316 2 5765 217 133 53 chr5 114123312 114125216 -85504934 - L1ME2 LINE L1 -1977 4982 2595 316 219 41 65 chr5 114125218 114125341 -85504809 - MER3 DNA MER1_type 0 209 90 330 303 81 0 chr5 114125341 114125562 -85504588 - L1ME2 LINE L1 -4658 2464 2226 734 256 6 0 chr5 114125623 114125787 -85504363 - FRAM SINE Alu 0 166 2 1862 127 30 0 chr5 114125813 114126080 -85504070 - AluSx SINE Alu -25 287 13 2242 94 0 25 chr5 114126085 114126404 -85503746 - AluY SINE Alu 0 311 1 1614 235 97 80 chr5 114126683 114126794 -85503356 - L1ME2 LINE L1 -4891 1532 1424 2037 133 10 7 chr5 114126794 114127094 -85503056 - AluSx SINE Alu -11 301 1 1614 235 97 80 chr5 114127094 114127897 -85502253 - L1ME2 LINE L1 -4999 1424 804 2188 107 7 0 chr5 114127897 114128196 -85501954 - AluSq SINE Alu -12 301 1 1614 235 97 80 chr5 114128196 114128334 -85501816 - L1ME2 LINE L1 -5619 804 670 6731 39 24 0 chr5 114128335 114129231 -85500919 - L1PA5 LINE L1 0 6154 5232 2092 133 0 16 chr5 114129303 114129611 -85500539 + AluSx SINE Alu 1 303 -9 1252 216 52 44 chr5 114129828 114130190 -85499960 - MLT1A1 LTR MaLR 0 365 1 203 260 0 63 chr5 114130224 114130324 -85499826 + T-rich Low_complexity Low_complexity 3 95 -26 198 0 0 0 chr5 114130324 114130346 -85499804 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 203 260 0 63 chr5 114130346 114130372 -85499778 + T-rich Low_complexity Low_complexity 95 121 0 2408 92 3 0 chr5 114130403 114130707 -85499443 + AluSg SINE Alu 1 305 -5 327 253 20 33 chr5 114130764 114130914 -85499236 - L1M4 LINE L1 -2098 4048 3901 2265 100 0 3 chr5 114131098 114131397 -85498753 - AluSq SINE Alu -2 311 14 1662 161 18 0 chr5 114131604 114131877 -85498273 - AluJb SINE Alu -34 278 1 460 322 64 26 chr5 114131930 114132197 -85497953 - L1MEd LINE L1 -5397 722 446 238 241 120 23 chr5 114132535 114132668 -85497482 - L1ME4a LINE L1 -3 6118 5973 2351 114 0 0 chr5 114132779 114133087 -85497063 + AluSx SINE Alu 1 308 -4 831 207 54 64 chr5 114133172 114133467 -85496683 - L1ME4a LINE L1 -183 5987 5696 665 213 7 13 chr5 114133467 114133617 -85496533 - FRAM SINE Alu -6 170 22 349 293 91 42 chr5 114133624 114134437 -85495713 - L1ME4a LINE L1 -504 5662 4811 231 125 71 36 chr5 114134437 114134493 -85495657 - MER3 DNA MER1_type 0 209 152 2192 117 0 0 chr5 114134548 114134848 -85495302 - AluSx SINE Alu -12 300 1 762 279 84 28 chr5 114134859 114135514 -85494636 - L1ME4a LINE L1 -1326 4820 4129 430 292 75 46 chr5 114135562 114135802 -85494348 + L1MEc LINE L1 1516 1762 -4634 483 184 61 10 chr5 114136036 114136134 -85494016 + Tigger5 DNA MER2_type 2221 2323 0 3694 264 72 21 chr5 114136337 114138057 -85492093 + L1MEc LINE L1 2032 3803 -2412 1556 229 50 13 chr5 114138675 114139072 -85491078 - MLT1F1 LTR MaLR -59 508 97 353 244 70 101 chr5 114139801 114140059 -85490091 + HAL1 LINE L1 917 1166 -1341 246 284 227 28 chr5 114140137 114140634 -85489516 + HAL1 LINE L1 1320 1915 -592 474 266 207 0 chr5 114140695 114140932 -85489218 + L2 LINE L2 1802 2087 -1227 344 172 0 31 chr5 114140934 114140998 -85489152 + MER46B DNA MER2_type 2 63 -298 480 137 14 0 chr5 114141021 114141094 -85489056 - AluS SINE Alu -239 74 1 1420 163 101 3 chr5 114141094 114141382 -85488768 + MER46B DNA MER2_type 45 235 -1 1915 291 108 5 chr5 114141385 114142003 -85488147 + L2 LINE L2 2093 2774 -540 2182 103 3 0 chr5 114142013 114142304 -85487846 + AluSg SINE Alu 1 292 -18 1172 278 136 28 chr5 114143059 114143176 -85486974 - Charlie7 DNA MER1_type -1941 671 568 1644 156 19 42 chr5 114143176 114143483 -85486667 - AluJb SINE Alu -6 306 7 1172 278 136 28 chr5 114143483 114143966 -85486184 - Charlie7 DNA MER1_type -2044 568 6 202 312 64 37 chr5 114144022 114144131 -85486019 + MIR SINE MIR 91 202 -60 2200 128 0 0 chr5 114144264 114144561 -85485589 - AluSx SINE Alu -14 298 2 21 0 0 0 chr5 114145049 114145070 -85485080 + AT_rich Low_complexity Low_complexity 1 21 0 1972 150 3 19 chr5 114145987 114146300 -85483850 - AluSx SINE Alu -3 309 2 2022 133 13 3 chr5 114146301 114146602 -85483548 - AluSx SINE Alu -8 304 1 1232 48 0 0 chr5 114146897 114147044 -85483106 + AluYa5 SINE Alu 163 309 -2 655 224 71 33 chr5 114149413 114149596 -85480554 - MIR SINE MIR -72 190 1 27 29 0 0 chr5 114149976 114150010 -85480140 + AT_rich Low_complexity Low_complexity 1 34 0 349 227 182 39 chr5 114150231 114150385 -85479765 + MER46C DNA MER2_type 155 330 -8 201 196 0 20 chr5 114150773 114150824 -85479326 + T-rich Low_complexity Low_complexity 1 50 0 1991 139 7 0 chr5 114151589 114151900 -85478250 - AluSx SINE Alu 0 313 1 189 359 123 19 chr5 114152526 114152632 -85477518 - L2 LINE L2 -19 3253 3137 1209 116 12 0 chr5 114154024 114154188 -85475962 - AluSg/x SINE Alu -18 292 127 2340 103 3 0 chr5 114154193 114154504 -85475646 - AluSp SINE Alu -1 312 1 183 329 0 0 chr5 114154513 114154595 -85475555 + L2 LINE L2 1888 1969 -1345 574 303 136 23 chr5 114155102 114155323 -85474827 - MIR SINE MIR -8 254 9 444 165 13 0 chr5 114155956 114156035 -85474115 - MER58 DNA MER1_type -2 2418 2339 378 215 11 54 chr5 114156033 114156126 -85474024 - MER58 DNA MER1_type -2328 92 4 * 2250 105 3 3 chr5 114157072 114157378 -85472772 - AluSp SINE Alu -7 306 1 2536 142 31 2 chr5 114157894 114158310 -85471840 - MSTA LTR MaLR 0 428 1 683 238 48 0 chr5 114159056 114159203 -85470947 - MER58B DNA MER1_type -1 340 187 409 263 102 43 chr5 114159204 114159669 -85470481 - L1P LINE L1 -2170 3976 3475 265 60 0 40 chr5 114159933 114159983 -85470167 + (TA)n Simple_repeat Simple_repeat 2 49 0 2234 102 0 3 chr5 114159983 114160277 -85469873 - AluSq SINE Alu -20 293 1 884 256 138 32 chr5 114160362 114160709 -85469441 - L2 LINE L2 -2 3311 2928 308 277 59 104 chr5 114161613 114161815 -85468335 - L1MC4a LINE L1 -1815 5993 5801 296 188 29 14 chr5 114161815 114161884 -85468266 + MER6 DNA MER2_type 796 865 0 766 278 56 38 chr5 114161971 114162347 -85467803 - L1MC4a LINE L1 -708 5443 5281 2804 3 0 0 chr5 114162483 114162783 -85467367 - AluYa5 SINE Alu -11 300 1 1917 134 34 3 chr5 114162963 114163255 -85466895 - AluSx SINE Alu -11 301 1 381 344 132 20 chr5 114163339 114163694 -85466456 - L2 LINE L2 -93 3220 2826 2220 108 0 0 chr5 114165989 114166286 -85463864 - AluSx SINE Alu -15 297 1 2876 214 50 44 chr5 114167012 114167729 -85462421 - L1MC4 LINE L1 -5 8037 7313 2421 141 25 25 chr5 114167729 114168162 -85461988 - Tigger2a DNA MER2_type 0 434 2 2876 214 50 44 chr5 114168162 114168282 -85461868 - L1MC4 LINE L1 -729 7313 7195 1860 136 0 7 chr5 114168282 114168569 -85461581 - AluJb SINE Alu -1 311 27 3525 88 17 36 chr5 114168569 114169090 -85461060 - MER9 LTR ERVK 0 511 1 228 222 0 22 chr5 114169112 114169157 -85460993 - L1MC4a LINE L1 -683 7125 7082 403 280 67 20 chr5 114169221 114169371 -85460779 + L3 LINE CR1 1204 1360 -217 244 330 60 46 chr5 114169907 114170125 -85460025 - L2 LINE L2 -955 2359 2139 22 0 0 0 chr5 114170375 114170397 -85459753 + AT_rich Low_complexity Low_complexity 1 22 0 934 167 44 48 chr5 114170563 114170791 -85459359 - MER46A DNA MER2_type -9 227 1 17696 188 43 23 chr5 114171504 114176356 -85453794 - L1PA13 LINE L1 -1288 5509 339 5224 184 45 12 chr5 114176354 114177677 -85452473 - L1PA12 LINE L1 -5577 2004 106 * 284 191 132 0 chr5 114177678 114177746 -85452404 - LTR50 LTR ERVL -361 434 358 10519 174 40 106 chr5 114177817 114179180 -85450970 - L1P5 LINE L1 -372 6498 5046 2116 118 3 3 chr5 114179180 114179476 -85450674 - AluSg SINE Alu -11 299 4 10519 174 40 106 chr5 114179476 114179676 -85450474 - L1P5 LINE L1 -1824 5046 4834 2181 73 14 3 chr5 114179676 114179964 -85450186 + MER11A LTR ERVK 976 1266 0 10519 174 40 106 chr5 114179964 114182591 -85447559 - L1P5 LINE L1 -2036 4834 2223 1884 162 106 27 chr5 114182594 114183095 -85447055 + MLT2A2 LTR ERVL 1 554 0 4845 242 39 30 chr5 114183099 114186097 -85444053 - L1P5 LINE L1 -4592 2271 3 3181 122 5 11 chr5 114186128 114186699 -85443451 - L1M1 LINE L1 -541 5764 5197 390 182 0 0 chr5 114186711 114186788 -85443362 + L1MB2 LINE L1 5313 5389 -777 3218 151 72 7 chr5 114188059 114188669 -85441481 + L1MB2 LINE L1 5504 6153 -18 3114 45 0 0 chr5 114188967 114189345 -85440805 - L1PA4 LINE L1 -6 6149 5772 2084 46 0 0 chr5 114189345 114189605 -85440545 + L1PA4 LINE L1 5506 5765 -390 21 36 0 0 chr5 114189980 114190008 -85440142 + AT_rich Low_complexity Low_complexity 1 28 0 1451 220 0 30 chr5 114190482 114190786 -85439364 - AluJo SINE Alu -17 295 1 31 44 0 0 chr5 114190831 114190876 -85439274 + AT_rich Low_complexity Low_complexity 1 45 0 420 173 65 0 chr5 114190951 114191119 -85439031 + (TA)n Simple_repeat Simple_repeat 1 179 0 386 205 47 12 chr5 114192146 114192317 -85437833 + (TA)n Simple_repeat Simple_repeat 1 177 0 282 174 50 6 chr5 114192334 114192796 -85437354 + (TA)n Simple_repeat Simple_repeat 1 482 0 418 194 53 6 chr5 114192853 114193023 -85437127 + (TA)n Simple_repeat Simple_repeat 2 179 0 238 298 21 0 chr5 114193095 114193189 -85436961 + (TA)n Simple_repeat Simple_repeat 2 97 0 28 79 0 0 chr5 114193977 114194040 -85436110 + AT_rich Low_complexity Low_complexity 1 63 0 341 137 110 0 chr5 114194308 114194381 -85435769 - Charlie2 DNA MER1_type -36 2826 2746 22 0 0 0 chr5 114194418 114194440 -85435710 + AT_rich Low_complexity Low_complexity 1 22 0 789 194 215 0 chr5 114194454 114194738 -85435412 - Charlie2 DNA MER1_type -511 2351 2007 292 117 133 0 chr5 114194778 114194838 -85435312 - Charlie2 DNA MER1_type -924 1938 1871 629 267 26 47 chr5 114194872 114195104 -85435046 - Charlie2 DNA MER1_type -2541 241 15 539 218 115 13 chr5 114195167 114195323 -85434827 + MIR SINE MIR 78 249 -13 23 0 0 0 chr5 114195602 114195625 -85434525 + AT_rich Low_complexity Low_complexity 1 23 0 1427 251 152 18 chr5 114196082 114196695 -85433455 - LTR41 LTR ERVL -78 695 1 425 263 50 35 chr5 114197003 114197201 -85432949 - ERVL LTR ERVL -331 5433 5233 395 348 18 26 chr5 114197335 114197562 -85432588 - ERVL LTR ERVL -5065 699 475 2159 223 86 45 chr5 114197976 114198713 -85431437 - LTR41 LTR ERVL -6 767 1 2772 156 9 5 chr5 114199022 114199599 -85430551 - L1MB3 LINE L1 0 6183 5539 1205 98 18 0 chr5 114200368 114200532 -85429618 - AluSg/x SINE Alu -9 303 137 2127 100 3 45 chr5 114200532 114200842 -85429308 - AluSq SINE Alu -16 297 1 23 33 0 0 chr5 114201724 114201754 -85428396 + AT_rich Low_complexity Low_complexity 1 30 0 2421 88 0 3 chr5 114201782 114202089 -85428061 - AluSq SINE Alu -7 306 1 312 216 0 0 chr5 114202528 114202625 -85427525 + T-rich Low_complexity Low_complexity 1 97 0 5188 63 25 47 chr5 114202625 114203986 -85426164 - SVA Other Other -518 1140 58 537 16 0 0 chr5 114203986 114204048 -85426102 + (AGGGGG)n Simple_repeat Simple_repeat 3 64 0 265 263 0 40 chr5 114204233 114204332 -85425818 + T-rich Low_complexity Low_complexity 1 95 0 219 231 0 0 chr5 114204412 114204451 -85425699 + L2 LINE L2 3219 3257 -15 262 279 47 0 chr5 114204823 114204909 -85425241 + MIR SINE MIR 149 238 -24 769 249 0 10 chr5 114205215 114205408 -85424742 - L1PB4 LINE L1 -1 6155 5965 197 251 175 58 chr5 114205736 114205907 -85424243 - MIR SINE MIR -2 260 70 2186 109 13 3 chr5 114206003 114206307 -85423843 - AluSx SINE Alu -5 307 1 30 0 0 0 chr5 114207502 114207532 -85422618 + AT_rich Low_complexity Low_complexity 1 30 0 736 179 0 8 chr5 114210403 114210526 -85419624 + FLAM_A SINE Alu 1 122 -11 944 305 192 35 chr5 114210917 114211713 -85418437 - L3 LINE CR1 -472 1105 185 185 0 40 0 chr5 114212525 114212550 -85417600 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 280 211 18 0 chr5 114213626 114213683 -85416467 - L2 LINE L2 -75 3238 3181 2082 96 27 10 chr5 114213993 114214285 -85415865 - AluSx SINE Alu -10 302 6 1637 226 115 31 chr5 114215024 114215503 -85414647 - LTR40a LTR ERVL 0 519 1 558 271 182 44 chr5 114216115 114216340 -85413810 - MIR SINE MIR -5 257 2 378 253 32 21 chr5 114217153 114217248 -85412902 - MIR3 SINE MIR -103 105 10 182 188 0 21 chr5 114217970 114218018 -85412132 + CT-rich Low_complexity Low_complexity 2 48 0 716 257 102 5 chr5 114218021 114218208 -85411942 + MIR SINE MIR 37 241 -21 21 57 0 0 chr5 114219495 114219530 -85410620 + AT_rich Low_complexity Low_complexity 1 35 0 321 253 13 13 chr5 114219707 114219782 -85410368 + MER5A DNA MER1_type 105 179 -10 1448 124 55 0 chr5 114220403 114220621 -85409529 + MER30 DNA MER1_type 1 230 0 491 282 19 6 chr5 114222107 114222285 -85407865 + L1MC4 LINE L1 6445 6634 -1396 1497 147 58 24 chr5 114222313 114222605 -85407545 - MER50 LTR ERV1 0 734 433 1384 94 36 9 chr5 114222599 114222822 -85407328 - MER50 LTR ERV1 -505 229 1 * 1276 197 116 6 chr5 114222833 114223178 -85406972 + L1MC4 LINE L1 6706 7088 -954 2035 225 75 15 chr5 114223180 114223859 -85406291 + L1MC4 LINE L1 7240 8041 -1 510 224 0 0 chr5 114224370 114224486 -85405664 - MER73 LTR ERVL 0 644 529 2104 128 3 7 chr5 114224513 114224811 -85405339 - AluSx SINE Alu -1 311 15 2121 104 0 17 chr5 114274924 114275242 -85354908 + AluSp SINE Alu 2 314 0 816 238 138 38 chr5 114275290 114275690 -85354460 - L1ME LINE L1 -301 5820 5381 213 290 16 0 chr5 114276162 114276224 -85353926 + L2 LINE L2 2797 2859 -455 * 704 319 73 19 chr5 114276217 114276531 -85353619 + L2 LINE L2 2968 3298 -15 828 319 91 18 chr5 114276696 114277443 -85352707 + L2 LINE L2 2511 3313 0 421 335 50 16 chr5 114277826 114278008 -85352142 - MER91B DNA MER1_type 0 190 3 1736 189 43 49 chr5 114279007 114279477 -85350673 - MLT1C LTR MaLR 0 467 1 441 211 11 33 chr5 114279663 114279753 -85350397 + MER5A DNA MER1_type 16 103 -86 4985 119 41 15 chr5 114279806 114280655 -85349495 - L1MA5 LINE L1 -1 6299 5429 2746 158 6 2 chr5 114281540 114282014 -85348136 - L1MA8 LINE L1 -23 6268 5793 2873 150 14 2 chr5 114283304 114283798 -85346352 - L1MA8 LINE L1 -23 6268 5769 2960 111 88 27 chr5 114283812 114284308 -85345842 - L1MA5A LINE L1 -6 6291 5756 200 35 35 0 chr5 114284308 114284337 -85345813 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 2960 111 88 27 chr5 114284337 114284400 -85345750 - L1MA5A LINE L1 -541 5756 5698 2210 58 14 3 chr5 114284540 114284832 -85345318 - L1PA8 LINE L1 -177 5995 5701 * 3765 165 29 18 chr5 114284831 114285590 -85344560 - L1MA5 LINE L1 -816 5330 4564 717 54 43 0 chr5 114285596 114285689 -85344461 - L1M2 LINE L1 -516 5775 5679 * 1406 161 20 0 chr5 114285664 114285912 -85344238 + L1M2 LINE L1 5406 5658 -654 271 298 21 71 chr5 114286465 114286606 -85343544 + MIR3 SINE MIR 5 138 -70 344 231 167 45 chr5 114287642 114287798 -85342352 + MIR SINE MIR 85 259 -3 234 265 84 36 chr5 114288511 114288594 -85341556 + L2 LINE L2 3227 3313 0 193 247 39 39 chr5 114289524 114289601 -85340549 - MIR SINE MIR -51 211 135 401 211 77 83 chr5 114289606 114289750 -85340400 - MIR SINE MIR -102 160 16 2130 97 23 10 chr5 114289750 114290050 -85340100 - AluSq SINE Alu -9 304 1 401 211 77 83 chr5 114290050 114290061 -85340089 - MIR SINE MIR -246 16 6 2149 73 0 0 chr5 114290083 114290355 -85339795 + AluY SINE Alu 1 272 -39 447 87 0 0 chr5 114290358 114290427 -85339723 + Alu SINE Alu 237 305 -7 456 272 41 0 chr5 114290837 114290984 -85339166 - MLT1L LTR MaLR -54 561 409 367 260 83 0 chr5 114291051 114291147 -85339003 - MLT1L LTR MaLR -364 251 148 416 291 117 43 chr5 114291665 114292015 -85338135 - MLT1J LTR MaLR -17 494 119 211 268 18 0 chr5 114293111 114293167 -85336983 + L2 LINE L2 3210 3266 -6 453 283 111 45 chr5 114293775 114294019 -85336131 + MIR SINE MIR 3 262 0 385 287 125 0 chr5 114294065 114294201 -85335949 + MIR3 SINE MIR 15 167 -41 626 346 172 33 chr5 114294471 114295451 -85334699 + L2 LINE L2 82 1198 -2116 307 71 0 0 chr5 114295482 114295524 -85334626 - MLT1I LTR MaLR -2 407 366 372 189 150 31 chr5 114295563 114295690 -85334460 - MLT1J1 LTR MaLR -34 412 271 398 252 29 36 chr5 114295730 114295869 -85334281 - MLT1I LTR MaLR -271 138 1 195 210 12 123 chr5 114296106 114296187 -85333963 + MIR SINE MIR 121 192 -70 14113 130 19 16 chr5 114296193 114298129 -85332021 - Tigger1 DNA MER2_type 0 2418 488 633 25 0 0 chr5 114298129 114298209 -85331941 + L1PA3 LINE L1 6073 6152 -3 180 0 0 0 chr5 114298212 114298232 -85331918 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 14113 130 19 16 chr5 114298232 114298703 -85331447 - Tigger1 DNA MER2_type -1931 487 1 39 38 0 0 chr5 114298733 114298786 -85331364 + AT_rich Low_complexity Low_complexity 1 53 0 380 255 104 0 chr5 114298841 114298947 -85331203 + L2 LINE L2 3192 3308 -5 617 229 0 0 chr5 114298947 114299069 -85331081 - FLAM_A SINE Alu -11 122 1 212 0 36 0 chr5 114300098 114300126 -85330024 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 304 292 73 0 chr5 114300530 114300626 -85329524 - L2 LINE L2 -12 3260 3158 662 250 83 48 chr5 114300638 114301113 -85329037 + Charlie8 DNA MER1_type 1 488 -1929 477 279 79 68 chr5 114301572 114301837 -85328313 - ERVL LTR ERVL -1978 3786 3519 2414 150 2 9 chr5 114301855 114302274 -85327876 - Tigger2 DNA MER2_type 0 2718 2303 330 194 0 0 chr5 114302298 114302360 -85327790 + MER8 DNA MER2_type 178 239 0 715 330 39 4 chr5 114302361 114302640 -85327510 - ERVL LTR ERVL -2263 3501 3213 * 2817 297 76 19 chr5 114302634 114303920 -85326230 - ERVL LTR ERVL -3144 2620 1262 446 345 70 17 chr5 114303956 114304315 -85325835 - ERVL LTR ERVL -4563 1201 824 345 322 62 0 chr5 114304369 114304515 -85325635 - ERVL LTR ERVL -5105 659 505 4332 212 23 26 chr5 114305813 114306890 -85323260 + Charlie1a DNA MER1_type 1 1074 -381 426 85 0 0 chr5 114306891 114306950 -85323200 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 1561 202 122 37 chr5 114306954 114307444 -85322706 + MER34 LTR ERV1 11 542 0 240 86 0 0 chr5 114307461 114307496 -85322654 + (TA)n Simple_repeat Simple_repeat 2 36 0 641 137 8 34 chr5 114307519 114307636 -85322514 - L1MC1 LINE L1 -9 6324 6211 2579 138 24 11 chr5 114307637 114308092 -85322058 + L1MC1 LINE L1 5579 6039 -294 936 105 0 33 chr5 114309484 114309636 -85320514 + L1MC1 LINE L1 6054 6200 -133 668 263 22 108 chr5 114311273 114311642 -85318508 - REP3 LTR ERV -221 341 5 1923 162 23 0 chr5 114312205 114312508 -85317642 - AluSx SINE Alu -2 310 1 236 214 18 18 chr5 114313846 114313902 -85316248 - L3b LINE CR1 -127 1456 1401 320 287 74 8 chr5 114316318 114316440 -85313710 - MIR SINE MIR -13 249 120 208 140 53 0 chr5 114316445 114316502 -85313648 + (TTATA)n Simple_repeat Simple_repeat 2 61 0 341 247 59 0 chr5 114316936 114317021 -85313129 - L2 LINE L2 0 3313 3224 181 303 101 9 chr5 114317326 114317435 -85312715 + L2 LINE L2 3138 3256 -16 340 338 185 0 chr5 114317535 114317686 -85312464 + MER5A DNA MER1_type 11 189 0 1846 144 0 0 chr5 114319973 114320252 -85309898 + AluSx SINE Alu 30 308 0 25 0 0 0 chr5 114320952 114320977 -85309173 + AT_rich Low_complexity Low_complexity 1 25 0 354 260 0 22 chr5 114322177 114322267 -85307883 - MIR3 SINE MIR -18 190 100 445 292 90 64 chr5 114322316 114322392 -85307758 - L1MC4a LINE L1 -323 5798 5725 5304 34 2 6 chr5 114322392 114323033 -85307117 + L1PA4 LINE L1 5518 6155 0 445 292 90 64 chr5 114323033 114323598 -85306552 - L1MC4a LINE L1 -396 5725 5264 250 304 29 0 chr5 114323598 114323667 -85306483 - L2 LINE L2 -12 3301 3231 369 287 98 8 chr5 114323733 114323855 -85306295 - MIR SINE MIR -84 178 46 360 64 0 0 chr5 114324259 114324306 -85305844 + (CA)n Simple_repeat Simple_repeat 2 48 0 2386 71 0 0 chr5 114324318 114324612 -85305538 - AluY SINE Alu -17 294 1 1744 162 19 23 chr5 114324783 114325092 -85305058 + AluJo SINE Alu 1 308 -4 4634 256 77 22 chr5 114325600 114325886 -85304264 + L1MEc LINE L1 23 292 -6104 1938 88 95 4 chr5 114325886 114326159 -85303991 + AluSx SINE Alu 1 298 -14 4634 256 77 22 chr5 114326159 114327619 -85302531 + L1MEc LINE L1 292 1866 -4530 1195 120 157 0 chr5 114327720 114327937 -85302213 + AluSx SINE Alu 46 296 -16 3816 253 89 18 chr5 114327954 114329486 -85300664 + L1MEc LINE L1 328 1967 -4429 1406 154 53 131 chr5 114329489 114329846 -85300304 + MLT1A2 LTR MaLR 5 330 -44 2128 117 24 0 chr5 114329846 114330137 -85300013 - AluSx SINE Alu -14 298 1 1406 154 53 131 chr5 114330137 114330176 -85299974 + MLT1A2 LTR MaLR 330 370 -4 4622 241 79 32 chr5 114330185 114332261 -85297889 + L1MEc LINE L1 2107 4231 -1984 445 225 33 60 chr5 114332238 114332372 -85297778 + L1ME2 LINE L1 5934 6068 -167 * 507 17 0 0 chr5 114332372 114332432 -85297718 + (GGAA)n Simple_repeat Simple_repeat 4 63 0 445 225 33 60 chr5 114332432 114332509 -85297641 + L1ME2 LINE L1 6068 6146 -89 578 180 117 68 chr5 114332518 114332724 -85297426 - MER2 DNA MER2_type 0 345 130 1066 239 8 13 chr5 114332725 114332963 -85297187 - MER8 DNA MER2_type -2 237 1 345 171 24 0 chr5 114332963 114333045 -85297105 + L1MA10 LINE L1 6249 6332 -2 805 257 33 37 chr5 114333846 114334091 -85296059 - MIR SINE MIR -12 250 7 287 198 10 59 chr5 114334526 114334627 -85295523 + L1ME4a LINE L1 5970 6065 -56 201 434 8 0 chr5 114334799 114334921 -85295229 + L3 LINE CR1 1409 1531 -46 378 260 10 19 chr5 114334923 114335027 -85295123 + MER5A DNA MER1_type 1 103 -86 480 290 129 5 chr5 114335777 114335970 -85294180 - MIR SINE MIR -18 244 28 511 322 0 0 chr5 114336304 114336422 -85293728 + L2 LINE L2 3137 3254 -18 226 346 184 41 chr5 114338207 114338767 -85291383 + L2 LINE L2 2150 2789 -525 1025 272 92 42 chr5 114338768 114339147 -85291003 - L2 LINE L2 0 3313 2916 192 370 67 39 chr5 114339204 114339412 -85290738 + L2 LINE L2 2840 3053 -219 390 270 83 93 chr5 114340197 114340486 -85289664 + L2 LINE L2 2987 3272 0 319 295 45 45 chr5 114340759 114340915 -85289235 + MLT1K LTR MaLR 87 242 -346 501 250 57 21 chr5 114340958 114341098 -85289052 + MIR SINE MIR 8 152 -110 571 286 42 27 chr5 114341210 114341469 -85288681 + MLT1K LTR MaLR 321 583 -5 455 379 10 34 chr5 114341575 114341781 -85288369 - MIR SINE MIR -54 208 8 2153 125 10 3 chr5 114343050 114343354 -85286796 - AluSq SINE Alu -5 308 3 12091 40 3 2 chr5 114343432 114348795 -85281355 - L1PA3 LINE L1 -2 6153 617 773 51 0 0 chr5 114348789 114348887 -85281263 - L1PA3 LINE L1 -6048 98 1 * 3655 196 37 97 chr5 114350147 114351608 -85278542 + L1P LINE L1 1442 2815 -3331 1812 71 0 0 chr5 114353853 114354091 -85276059 - L1PA6 LINE L1 -1 6153 5916 538 111 97 111 chr5 114354775 114354919 -85275231 + L1MC1 LINE L1 5960 6101 -232 1078 252 159 15 chr5 114354959 114355499 -85274651 - L1MC4a LINE L1 -1936 5872 5255 5301 41 0 0 chr5 114355989 114356618 -85273532 - L1PA7 LINE L1 -5 6149 5521 1118 209 31 4 chr5 114357134 114357359 -85272791 + L1PA14 LINE L1 1 231 -7350 17271 193 32 6 chr5 114357484 114357713 -85272437 + L1PA14 LINE L1 2471 2693 -4906 2068 140 0 16 chr5 114357713 114358028 -85272122 + AluSx SINE Alu 1 310 -2 17271 193 32 6 chr5 114358028 114362816 -85267334 + L1PA14 LINE L1 2693 7590 -9 29 0 0 0 chr5 114362964 114362993 -85267157 + AT_rich Low_complexity Low_complexity 1 29 0 1889 132 32 49 chr5 114363235 114363605 -85266545 + THE1B LTR MaLR 1 364 0 11471 94 15 0 chr5 114363605 114365161 -85264989 + THE1B-int LTR MaLR 1 1580 0 2048 137 13 35 chr5 114365161 114365533 -85264617 + THE1B LTR MaLR 1 364 0 445 316 73 19 chr5 114368589 114368795 -85261355 + MIR SINE MIR 46 262 0 189 0 0 0 chr5 114368960 114368981 -85261169 + (T)n Simple_repeat Simple_repeat 1 21 0 250 200 12 62 chr5 114369743 114369823 -85260327 + MER103 DNA DNA 31 106 -60 292 254 85 42 chr5 114369924 114370042 -85260108 + L2 LINE L2 3191 3313 0 245 236 0 0 chr5 114370876 114370940 -85259210 + L1ME3 LINE L1 5493 5556 -565 746 223 30 0 chr5 114370958 114371124 -85259026 - MIR SINE MIR -24 238 68 364 306 74 8 chr5 114371177 114371498 -85258652 + L1ME3 LINE L1 5632 5935 -227 2262 116 0 3 chr5 114371637 114371947 -85258203 + AluSg SINE Alu 1 309 -1 387 330 79 28 chr5 114373013 114373228 -85256922 - MIR SINE MIR -17 245 20 209 260 0 40 chr5 114374029 114374079 -85256071 - L2 LINE L2 -15 3298 3251 23 68 0 0 chr5 114375020 114375064 -85255086 + AT_rich Low_complexity Low_complexity 1 44 0 289 119 0 0 chr5 114376157 114376199 -85253951 - MER63 DNA MER1_type -35 1027 986 306 145 32 16 chr5 114376201 114376263 -85253887 - MER63 DNA MER1_type -305 757 695 225 191 43 0 chr5 114376401 114376448 -85253702 + L2 LINE L2 3265 3313 0 381 304 79 37 chr5 114376721 114376935 -85253215 + MIR SINE MIR 40 262 0 190 340 64 11 chr5 114376996 114377090 -85253060 + MIR SINE MIR 77 175 -87 663 217 63 50 chr5 114377261 114377401 -85252749 + MIR SINE MIR 12 158 -104 411 200 222 0 chr5 114377401 114377491 -85252659 + MER81 DNA DNA 5 114 0 663 217 63 50 chr5 114377491 114377571 -85252579 + MIR SINE MIR 158 235 -27 508 283 70 21 chr5 114378085 114378272 -85251878 + MIR SINE MIR 32 227 -35 371 241 0 24 chr5 114379516 114379599 -85250551 + MER5B DNA MER1_type 78 158 -20 255 228 43 54 chr5 114380637 114380729 -85249421 + MIR SINE MIR 125 215 -47 292 291 20 106 chr5 114380804 114380955 -85249195 + L2 LINE L2 3176 3313 0 190 233 47 0 chr5 114382622 114382665 -85247485 + L2 LINE L2 3038 3082 -231 32 43 0 0 chr5 114383842 114383888 -85246262 + AT_rich Low_complexity Low_complexity 1 46 0 2334 69 31 0 chr5 114383894 114384182 -85245968 + AluY SINE Alu 1 297 -14 280 176 0 81 chr5 114384213 114384287 -85245863 + L1MC5 LINE L1 7717 7784 -177 * 1301 169 25 1 chr5 114384271 114384544 -85245606 + L1MA8 LINE L1 5752 5929 -239 355 169 81 88 chr5 114384559 114384695 -85245455 + L1MC5 LINE L1 7801 7935 -26 2700 260 88 66 chr5 114385345 114387133 -85243017 - L1MC4 LINE L1 -124 7918 6007 325 325 7 66 chr5 114388340 114388512 -85241638 - L1ME4a LINE L1 -20 6101 5949 1715 192 0 14 chr5 114388512 114388809 -85241341 - AluJo SINE Alu -19 293 1 325 325 7 66 chr5 114388809 114388910 -85241240 - L1ME4a LINE L1 -172 5949 5844 595 286 34 6 chr5 114390624 114390802 -85239348 - MIR SINE MIR 0 262 80 195 342 89 13 chr5 114391643 114391722 -85238428 + L2 LINE L2 3157 3241 -31 388 262 28 0 chr5 114392626 114392733 -85237417 + MIR3 SINE MIR 87 196 -12 310 222 347 28 chr5 114392756 114392900 -85237250 + MIR3 SINE MIR 16 205 -3 709 304 44 0 chr5 114393747 114394020 -85236130 - MLT1K LTR MaLR -114 474 190 457 296 52 128 chr5 114395428 114395834 -85234316 + L2 LINE L2 2881 3255 -17 370 202 30 20 chr5 114395932 114396031 -85234119 + MER3 DNA MER1_type 23 122 -87 180 0 0 0 chr5 114396038 114396058 -85234092 + (TTTAA)n Simple_repeat Simple_repeat 5 24 0 485 241 173 5 chr5 114396299 114396435 -85233715 + MIR SINE MIR 34 212 -50 315 49 0 0 chr5 114396435 114396476 -85233674 + (TG)n Simple_repeat Simple_repeat 1 41 0 485 241 173 5 chr5 114396476 114396530 -85233620 + MIR SINE MIR 212 256 -6 268 296 90 37 chr5 114398178 114398367 -85231783 - MIR3 SINE MIR -9 199 1 353 230 27 0 chr5 114398368 114398442 -85231708 + L2 LINE L2 3197 3272 0 222 282 0 70 chr5 114399523 114399594 -85230556 + L2 LINE L2 3239 3304 -9 2018 152 3 3 chr5 114400885 114401188 -85228962 - AluJb SINE Alu -9 303 1 201 94 0 0 chr5 114401839 114401871 -85228279 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 532 274 115 9 chr5 114402654 114402881 -85227269 + MIR SINE MIR 9 255 -7 628 219 0 36 chr5 114402989 114403126 -85227024 - FLAM_A SINE Alu -1 132 1 228 67 0 0 chr5 114403301 114403331 -85226819 + (CA)n Simple_repeat Simple_repeat 1 30 0 203 241 181 24 chr5 114403378 114403461 -85226689 + MIR SINE MIR 20 115 -93 477 286 45 13 chr5 114404602 114404756 -85225394 + MIR SINE MIR 64 222 -40 519 242 115 6 chr5 114405034 114405216 -85224934 - L2 LINE L2 0 3313 3112 1244 255 40 5 chr5 114405408 114405781 -85224369 - LTR40c LTR ERVL -49 416 31 271 306 41 0 chr5 114406541 114406639 -85223511 - MIR SINE MIR -77 185 84 897 223 62 48 chr5 114406711 114407002 -85223148 - LTR68 LTR ERV1 -15 725 431 620 87 43 25 chr5 114407002 114407163 -85222987 + (TCTA)n Simple_repeat Simple_repeat 1 164 0 3865 136 3 11 chr5 114407163 114407801 -85222349 - L1MA9 LINE L1 -1 6311 5679 262 122 0 0 chr5 114407801 114407842 -85222308 + L1M3 LINE L1 5436 5476 -858 1830 189 9 9 chr5 114407981 114408238 -85221912 - L1MA9 LINE L1 -654 5658 5402 1525 161 126 0 chr5 114408238 114408499 -85221651 - AluSg SINE Alu -16 294 1 1830 189 9 9 chr5 114408499 114408674 -85221476 - L1MA9 LINE L1 -910 5402 5227 438 30 0 218 chr5 114408674 114408775 -85221375 + MADE1 DNA Mariner 1 79 -1 1830 189 9 9 chr5 114408775 114408803 -85221347 - L1MA9 LINE L1 -1085 5227 5200 2069 146 17 52 chr5 114408805 114409209 -85220941 - MLT1B LTR MaLR 0 390 1 2310 265 126 62 chr5 114409425 114410079 -85220071 - ERVL LTR ERVL -2902 2862 2057 244 137 39 20 chr5 114410079 114410130 -85220020 + HSMAR1 DNA Mariner 1 52 -1235 2310 265 126 62 chr5 114410130 114410564 -85219586 - ERVL LTR ERVL -3707 2057 1652 966 245 40 79 chr5 114411350 114411754 -85218396 - LTR41 LTR ERVL -46 727 340 968 189 21 5 chr5 114411800 114411990 -85218160 - LTR41 LTR ERVL -578 195 3 304 285 119 79 chr5 114412267 114412646 -85217504 - L1M2 LINE L1 -5806 1043 650 217 264 11 11 chr5 114412880 114412967 -85217183 + (CGG)n Simple_repeat Simple_repeat 1 87 0 403 204 155 0 chr5 114415631 114415734 -85214416 - MIR SINE MIR -131 131 13 1909 103 49 86 chr5 114415817 114416167 -85213983 - MER1B DNA MER1_type 0 337 1 1642 190 3 30 chr5 114417434 114417739 -85212411 - AluJo SINE Alu -13 299 3 2311 93 0 0 chr5 114419201 114419490 -85210660 - AluSc SINE Alu -18 291 3 752 226 9 50 chr5 114419606 114419827 -85210323 - MER20 DNA MER1_type 0 219 8 680 204 82 3 chr5 114420585 114420828 -85209322 + MER58B DNA MER1_type 4 340 -1 396 281 105 55 chr5 114421882 114422120 -85208030 - HAL1 LINE L1 -13 2494 2245 345 323 24 55 chr5 114422226 114422390 -85207760 - HAL1b LINE L1 -437 911 753 1326 121 52 0 chr5 114422447 114422696 -85207454 + L1MA8 LINE L1 6020 6281 -10 998 95 0 172 chr5 114422696 114422928 -85207222 - 7SK RNA RNA -1 192 1 204 231 39 93 chr5 114423756 114423873 -85206277 - MIR SINE MIR -12 196 84 323 190 0 0 chr5 114424092 114424150 -85206000 + MIR SINE MIR 203 260 -2 333 262 68 29 chr5 114424157 114424260 -85205890 - L2 LINE L2 -13 3300 3194 193 391 0 0 chr5 114424645 114424714 -85205436 - L3b LINE CR1 -11 1572 1504 408 20 0 0 chr5 114425410 114425459 -85204691 + (TG)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr5 114426843 114426864 -85203286 + AT_rich Low_complexity Low_complexity 1 21 0 369 312 125 17 chr5 114427961 114428256 -85201894 + L2 LINE L2 2164 2490 -824 2165 203 69 11 chr5 114428709 114429186 -85200964 - MLT1D LTR MaLR 0 505 1 967 206 69 32 chr5 114429186 114429404 -85200746 - MIR SINE MIR -36 226 1 473 290 55 0 chr5 114429553 114429698 -85200452 - MIR SINE MIR -108 154 2 238 348 11 0 chr5 114429765 114429854 -85200296 + L3 LINE CR1 729 818 -759 317 319 132 23 chr5 114430500 114430766 -85199384 - L2 LINE L2 -11 3302 3008 1410 254 130 37 chr5 114430859 114431557 -85198593 - L2 LINE L2 -830 2484 1722 2157 209 34 13 chr5 114431566 114431606 -85198544 - MLT2B3 LTR ERVL 0 554 516 333 0 0 0 chr5 114431606 114431643 -85198507 + (CA)n Simple_repeat Simple_repeat 2 38 0 2157 209 34 13 chr5 114431643 114432072 -85198078 - MLT2B3 LTR ERVL -38 516 75 381 125 16 0 chr5 114432176 114432240 -85197910 - MLT2B3 LTR ERVL -489 65 1 332 238 0 0 chr5 114432310 114432390 -85197760 + MER116 DNA Mariner 1 80 0 2139 111 7 24 chr5 114433606 114433769 -85196381 - AluSx SINE Alu -17 295 138 2292 98 3 16 chr5 114433769 114434086 -85196064 - AluSp SINE Alu 0 313 1 2139 111 7 24 chr5 114434086 114434220 -85195930 - AluSx SINE Alu -174 138 3 223 226 16 32 chr5 114435600 114435662 -85194488 + CT-rich Low_complexity Low_complexity 5 65 0 281 253 181 0 chr5 114435870 114435953 -85194197 - L2 LINE L2 -7 3265 3168 220 377 26 0 chr5 114436948 114437062 -85193088 + MIR3 SINE MIR 87 203 -5 941 167 182 7 chr5 114437329 114437604 -85192546 + MER33 DNA MER1_type 1 323 -1 26 0 0 0 chr5 114438086 114438112 -85192038 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chr5 114439166 114439201 -85190949 + AT_rich Low_complexity Low_complexity 1 35 0 407 269 122 32 chr5 114439820 114439976 -85190174 + MIR SINE MIR 56 225 -37 222 262 196 9 chr5 114440770 114440877 -85189273 + MIR SINE MIR 25 151 -111 196 368 44 26 chr5 114441610 114441724 -85188426 + L2 LINE L2 3138 3253 -19 454 265 37 15 chr5 114441828 114441964 -85188186 + L2 LINE L2 3175 3313 0 1481 93 65 0 chr5 114443678 114443893 -85186257 + MER30 DNA MER1_type 2 230 0 206 313 30 69 chr5 114444205 114444336 -85185814 - MIR SINE MIR -117 145 20 777 160 124 12 chr5 114444462 114444535 -85185615 + MER53 DNA DNA 1 64 -125 230 71 0 24 chr5 114444535 114444577 -85185573 + (TG)n Simple_repeat Simple_repeat 2 42 0 777 160 124 12 chr5 114444577 114444672 -85185478 + MER53 DNA DNA 64 188 -1 532 329 113 5 chr5 114444959 114445181 -85184969 - MIR SINE MIR 0 262 17 2109 116 0 3 chr5 114445503 114445811 -85184339 - AluSx SINE Alu 0 308 2 186 345 167 29 chr5 114446613 114446888 -85183262 + L2 LINE L2 2590 2902 -412 1136 165 30 0 chr5 114447336 114447536 -85182614 + L1PA16 LINE L1 5961 6166 0 22 94 0 0 chr5 114447748 114447812 -85182338 + AT_rich Low_complexity Low_complexity 1 64 0 847 291 138 26 chr5 114448174 114448796 -85181354 - MER115 DNA AcHobo 0 693 2 2192 109 76 14 chr5 114450254 114450621 -85179529 - MLT1B LTR MaLR 0 390 1 237 314 0 47 chr5 114451146 114451232 -85178918 + L2 LINE L2 3191 3272 0 194 0 39 0 chr5 114451341 114451367 -85178783 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr5 114452141 114452164 -85177986 + AT_rich Low_complexity Low_complexity 1 23 0 1705 140 14 11 chr5 114452809 114453087 -85177063 + AluSx SINE Alu 3 281 -31 371 301 79 101 chr5 114453118 114453484 -85176666 - L1MC/D LINE L1 -478 5643 5283 570 252 165 23 chr5 114453757 114453975 -85176175 - MIR SINE MIR -12 250 2 921 174 15 10 chr5 114454170 114454366 -85175784 - L1MA4 LINE L1 -1 6299 6103 28043 31 0 2 chr5 114454457 114458648 -85171502 - L1PA3 LINE L1 0 6155 1972 1069 73 0 0 chr5 114458644 114458780 -85171370 - L1PA3 LINE L1 -6008 138 3 * 189 0 0 0 chr5 114458975 114458996 -85171154 + (T)n Simple_repeat Simple_repeat 1 21 0 265 288 68 68 chr5 114459081 114459244 -85170906 - Charlie8 DNA MER1_type -2182 235 73 219 288 0 0 chr5 114459257 114459316 -85170834 + (CA)n Simple_repeat Simple_repeat 2 60 0 701 263 0 0 chr5 114459467 114459623 -85170527 + FRAM SINE Alu 1 156 -10 1883 103 6 68 chr5 114460189 114460510 -85169640 - AluSx SINE Alu -11 301 1 279 215 0 31 chr5 114461387 114461452 -85168698 - L2 LINE L2 0 3272 3210 977 238 48 20 chr5 114461597 114461845 -85168305 + MIR SINE MIR 1 255 -7 1907 155 10 0 chr5 114461933 114462236 -85167914 - AluJb SINE Alu -4 308 3 463 106 0 0 chr5 114464030 114464096 -85166054 + MER116 DNA Mariner 1 66 -14 528 264 52 6 chr5 114466466 114466640 -85163510 - MIR SINE MIR -49 213 32 294 329 76 42 chr5 114466985 114467222 -85162928 + L2 LINE L2 2812 3056 -216 299 280 193 80 chr5 114467230 114467619 -85162531 - L2 LINE L2 -3 3269 2837 2220 221 79 33 chr5 114467625 114468345 -85161805 + L1ME2 LINE L1 5404 6156 -8 251 85 85 0 chr5 114468359 114468418 -85161732 + (CAATA)n Simple_repeat Simple_repeat 2 65 0 250 196 18 0 chr5 114468441 114468497 -85161653 + L1ME LINE L1 5843 5899 -222 34 24 0 0 chr5 114468691 114468732 -85161418 + AT_rich Low_complexity Low_complexity 1 41 0 1474 183 29 7 chr5 114468732 114469011 -85161139 - AluJo SINE Alu -25 287 3 1952 152 3 0 chr5 114469068 114469371 -85160779 - AluSx SINE Alu -8 304 1 2649 161 54 82 chr5 114469698 114470079 -85160071 - L1MB3 LINE L1 0 6183 5778 343 65 0 0 chr5 114470079 114470125 -85160025 - MADE1 DNA Mariner -34 46 1 2649 161 54 82 chr5 114470125 114470306 -85159844 - L1MB3 LINE L1 -405 5778 5593 313 274 83 24 chr5 114470443 114470611 -85159539 - L1ME4a LINE L1 -219 5902 5725 594 143 68 48 chr5 114470921 114471068 -85159082 - L1MB3 LINE L1 -582 5601 5452 654 241 87 5 chr5 114471300 114471507 -85158643 - L1ME4a LINE L1 -2270 5538 5315 248 380 13 0 chr5 114471567 114471646 -85158504 - L2 LINE L2 -71 3201 3122 25 31 0 0 chr5 114472109 114472141 -85158009 + AT_rich Low_complexity Low_complexity 1 32 0 39 38 0 0 chr5 114472813 114472866 -85157284 + AT_rich Low_complexity Low_complexity 1 53 0 4134 105 19 47 chr5 114473943 114474669 -85155481 - L1MA4A LINE L1 -5 6298 5593 193 400 12 0 chr5 114475310 114475395 -85154755 + L2 LINE L2 2568 2653 -661 447 264 32 16 chr5 114475481 114475606 -85154544 - L2 LINE L2 -2 3311 3185 1849 171 0 9 chr5 114476993 114477308 -85152842 - AluJo SINE Alu 0 312 1 189 358 0 37 chr5 114477733 114477814 -85152336 - L2 LINE L2 -9 3304 3227 2287 96 3 0 chr5 114477816 114478117 -85152033 + AluSp SINE Alu 1 302 -11 485 260 195 75 chr5 114478811 114479195 -85150955 - MLT1K LTR MaLR 0 588 159 655 200 10 80 chr5 114479597 114479797 -85150353 - L1MC4 LINE L1 0 8042 7857 2890 175 71 2 chr5 114479797 114480316 -85149834 + MER68 LTR ERV1 2 556 -6 586 244 165 19 chr5 114480395 114480664 -85149486 - L1ME3A LINE L1 0 6170 5861 3718 193 53 60 chr5 114480696 114482520 -85147630 - L1MB8 LINE L1 -83 6095 4290 1790 220 107 17 chr5 114482510 114483042 -85147108 - L1ME3A LINE L1 -280 5884 5305 * 396 55 0 0 chr5 114483047 114483102 -85147048 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 6313 60 13 1 chr5 114483102 114483915 -85146235 - L1PA7 LINE L1 -16 6138 5313 514 136 0 27 chr5 114483910 114484020 -85146130 - L1P LINE L1 -2833 3313 3207 * 271 269 62 0 chr5 114483999 114484129 -85146021 - L1ME3A LINE L1 -834 5312 5175 * 42 71 0 0 chr5 114484219 114484303 -85145847 + AT_rich Low_complexity Low_complexity 1 84 0 590 274 158 42 chr5 114484361 114484817 -85145333 - L1MB8 LINE L1 -2035 4111 3603 204 291 0 0 chr5 114485439 114485494 -85144656 + CT-rich Low_complexity Low_complexity 4 58 0 1560 177 138 38 chr5 114485916 114486367 -85143783 - LTR54B LTR ERV1 -2 496 1 33 25 0 0 chr5 114486580 114486620 -85143530 + AT_rich Low_complexity Low_complexity 1 40 0 833 11 0 0 chr5 114486621 114486715 -85143435 - L1PA3 LINE L1 -6 6149 6056 382 22 0 0 chr5 114486715 114486760 -85143390 + L1PA2 LINE L1 5838 5882 -273 2130 115 3 0 chr5 114486901 114487197 -85142953 - AluSx SINE Alu -15 297 1 253 378 62 36 chr5 114487610 114487946 -85142204 + L2 LINE L2 1702 2046 -1268 4116 222 129 38 chr5 114488030 114489449 -85140701 - L1MC4 LINE L1 -130 7912 6365 282 205 13 0 chr5 114489446 114489524 -85140626 - L1ME2 LINE L1 -1 6163 6085 * 231 280 27 0 chr5 114489945 114490020 -85140130 + HsTC2 DNA Tc2 28 104 -1794 431 319 125 19 chr5 114491417 114491633 -85138517 - MIR SINE MIR -13 249 11 28 0 0 0 chr5 114494389 114494417 -85135733 + AT_rich Low_complexity Low_complexity 1 28 0 1724 134 94 0 chr5 114495209 114495486 -85134664 + AluSx SINE Alu 1 303 -9 1634 176 10 10 chr5 114495617 114495906 -85134244 - AluJo SINE Alu -23 289 1 21 57 0 0 chr5 114496828 114496863 -85133287 + AT_rich Low_complexity Low_complexity 1 35 0 203 61 30 0 chr5 114498352 114498385 -85131765 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 941 237 29 44 chr5 114498647 114498989 -85131161 - L1MC5 LINE L1 -94 7867 7531 731 159 25 37 chr5 114499012 114499175 -85130975 - L1MA4A LINE L1 -5 6298 6138 2300 244 71 31 chr5 114499710 114501294 -85128856 - L1ME3 LINE L1 -6 6225 4578 908 240 131 11 chr5 114501302 114501677 -85128473 - L1ME3 LINE L1 -1815 4400 3981 353 335 57 57 chr5 114501685 114501948 -85128202 - L1ME3 LINE L1 -6121 275 13 288 111 0 0 chr5 114502645 114502690 -85127460 + (CA)n Simple_repeat Simple_repeat 2 46 0 569 275 99 0 chr5 114502734 114502916 -85127234 - MIR SINE MIR -5 257 58 2309 76 3 10 chr5 114503153 114503455 -85126695 - AluY SINE Alu -11 300 1 262 300 14 0 chr5 114503502 114503572 -85126578 - MIR SINE MIR -146 116 46 402 21 0 0 chr5 114503607 114503654 -85126496 + (TG)n Simple_repeat Simple_repeat 2 48 0 693 160 237 0 chr5 114505379 114505535 -85124615 + MER3 DNA MER1_type 13 205 -4 458 159 56 0 chr5 114505872 114505979 -85124171 - L1MA4 LINE L1 0 6300 6188 304 182 93 18 chr5 114505980 114506093 -85124057 + L1MA4 LINE L1 6115 6235 -70 1680 171 69 7 chr5 114506968 114507243 -85122907 - AluJo SINE Alu -20 292 1 456 316 134 35 chr5 114508457 114508852 -85121298 + L3 LINE CR1 1097 1530 -47 340 241 157 66 chr5 114509890 114510056 -85120094 - MLT1J LTR MaLR -2 509 329 243 223 0 106 chr5 114510498 114510592 -85119558 - MER103 DNA DNA -63 103 20 35 0 0 0 chr5 114513391 114513426 -85116724 + AT_rich Low_complexity Low_complexity 1 35 0 700 193 115 37 chr5 114514711 114514929 -85115221 + MER106A DNA MER1_type 1 235 -1 223 398 115 26 chr5 114515260 114515642 -85114508 + L2 LINE L2 2358 2773 -541 963 277 81 61 chr5 114515661 114516166 -85113984 - MLT1G1 LTR MaLR 0 595 81 272 122 24 0 chr5 114516345 114516386 -85113764 - MLT1J LTR MaLR -213 329 288 456 278 187 5 chr5 114519918 114520116 -85110034 + L2 LINE L2 3075 3308 -5 366 359 76 20 chr5 114520617 114520918 -85109232 + HAL1 LINE L1 1156 1473 -1034 312 254 51 90 chr5 114520976 114521153 -85108997 + HAL1b LINE L1 505 674 -674 313 332 64 30 chr5 114521409 114521611 -85108539 + L2 LINE L2 2201 2409 -905 268 160 100 0 chr5 114521644 114521694 -85108456 - MER94 DNA DNA -78 56 2 2148 82 0 38 chr5 114521756 114522088 -85108062 - AluY SINE Alu 0 321 1 272 336 81 69 chr5 114522092 114522452 -85107698 + L2 LINE L2 2521 2884 -430 2264 98 3 0 chr5 114522569 114522865 -85107285 + AluSp SINE Alu 1 297 -16 2157 113 3 3 chr5 114522903 114523203 -85106947 + AluSx SINE Alu 1 300 -12 232 327 27 73 chr5 114523279 114523389 -85106761 + L2 LINE L2 2985 3089 -183 302 317 6 31 chr5 114523538 114523699 -85106451 + L1ME LINE L1 5617 5773 -348 580 298 38 83 chr5 114524171 114524677 -85105473 - MLT1J LTR MaLR -24 487 5 438 232 120 22 chr5 114525303 114525568 -85104582 - MER46C DNA MER2_type 0 338 1 24 0 0 0 chr5 114526040 114526064 -85104086 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 114526328 114526357 -85103793 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 114527440 114527466 -85102684 + AT_rich Low_complexity Low_complexity 1 26 0 299 284 179 0 chr5 114528704 114528838 -85101312 + MIR3 SINE MIR 34 191 -17 305 266 129 36 chr5 114529356 114529495 -85100655 + MIR SINE MIR 39 190 -72 1955 184 89 21 chr5 114530429 114530902 -85099248 - MLT1D LTR MaLR 0 505 1 22 0 0 0 chr5 114531494 114531516 -85098634 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 114531585 114531615 -85098535 + AT_rich Low_complexity Low_complexity 1 30 0 2107 130 3 0 chr5 114531799 114532099 -85098051 - AluSx SINE Alu -11 301 1 788 279 115 51 chr5 114532408 114533383 -85096767 - L1MEc LINE L1 -4574 1822 786 242 308 34 8 chr5 114534431 114534548 -85095602 - L1M4 LINE L1 -1530 4616 4497 366 42 0 0 chr5 114534670 114534718 -85095432 + (TG)n Simple_repeat Simple_repeat 2 49 0 410 324 162 11 chr5 114535217 114535402 -85094748 - MIR SINE MIR -22 240 28 21 0 0 0 chr5 114535811 114535832 -85094318 + AT_rich Low_complexity Low_complexity 1 21 0 237 325 70 19 chr5 114536473 114536630 -85093520 + MIR SINE MIR 13 177 -85 988 146 0 37 chr5 114540102 114540266 -85089884 + FRAM SINE Alu 1 150 -26 402 57 0 0 chr5 114540266 114540319 -85089831 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 1680 88 22 0 chr5 114541231 114541478 -85088672 - AluSp SINE Alu 0 306 55 21 57 0 0 chr5 114541689 114541724 -85088426 + AT_rich Low_complexity Low_complexity 1 35 0 1362 154 0 14 chr5 114541988 114542086 -85088064 + MER2 DNA MER2_type 1 99 -246 1997 167 34 0 chr5 114542086 114542440 -85087710 + MER47A DNA MER2_type 1 366 0 1362 154 0 14 chr5 114542440 114542555 -85087595 + MER2 DNA MER2_type 99 211 -134 338 286 13 0 chr5 114542575 114542652 -85087498 + MER2 DNA MER2_type 268 345 0 241 275 50 12 chr5 114543144 114543224 -85086926 + MER5C DNA MER1_type 4 86 -238 1733 142 25 7 chr5 114543623 114543897 -85086253 + AluJb SINE Alu 1 279 -33 281 281 46 20 chr5 114544132 114544285 -85085865 - L1ME4a LINE L1 -9 6112 5956 373 279 87 46 chr5 114544504 114544851 -85085299 - L1ME4a LINE L1 -450 5671 5311 186 71 0 0 chr5 114545223 114545251 -85084899 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 2363 71 0 3 chr5 114545779 114546074 -85084076 - AluY SINE Alu -17 294 1 23 0 0 0 chr5 114546223 114546246 -85083904 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 114546783 114546811 -85083339 + AT_rich Low_complexity Low_complexity 1 28 0 2184 115 10 0 chr5 114548925 114549302 -85080848 - AluSx SINE Alu 0 380 1 2257 97 0 16 chr5 114550921 114551231 -85078919 + AluSg SINE Alu 6 310 0 7809 113 72 2 chr5 114552101 114553315 -85076835 - HSMAR2 DNA Mariner -2 1300 2 244 352 57 9 chr5 114553330 114553435 -85076715 + MIR SINE MIR 32 141 -67 288 83 0 0 chr5 114553536 114553572 -85076578 - U2 snRNA snRNA -152 36 1 446 287 26 56 chr5 114554135 114554330 -85075820 + MIR SINE MIR 12 200 -62 2310 193 126 59 chr5 114554560 114554902 -85075248 - Charlie2 DNA MER1_type -29 2833 2516 243 0 0 0 chr5 114554902 114554929 -85075221 + (TG)n Simple_repeat Simple_repeat 2 28 0 2310 193 126 59 chr5 114554929 114555266 -85074884 - Charlie2 DNA MER1_type -346 2516 2203 6335 83 16 17 chr5 114555266 114556815 -85073335 - SVA Other Other -835 1386 4 2310 193 126 59 chr5 114556815 114557036 -85073114 - Charlie2 DNA MER1_type -659 2203 1870 25 51 0 0 chr5 114559179 114559218 -85070932 + AT_rich Low_complexity Low_complexity 1 39 0 1886 130 7 27 chr5 114559218 114559510 -85070640 - AluSx SINE Alu -25 287 2 276 242 75 85 chr5 114560069 114560307 -85069843 - L1P4 LINE L1 -324 5842 5607 256 194 108 54 chr5 114560653 114560746 -85069404 + MIR SINE MIR 159 256 -6 224 328 62 0 chr5 114560827 114560891 -85069259 - L2 LINE L2 -54 3259 3192 21 0 0 0 chr5 114561721 114561742 -85068408 + AT_rich Low_complexity Low_complexity 1 21 0 812 147 0 0 chr5 114562627 114562743 -85067407 + FLAM_A SINE Alu 1 116 -17 180 0 0 0 chr5 114562746 114562766 -85067384 + (T)n Simple_repeat Simple_repeat 1 20 0 2323 105 0 0 chr5 114564252 114564585 -85065565 - L1PB1 LINE L1 -7 6144 5812 21 0 0 0 chr5 114565402 114565423 -85064727 + AT_rich Low_complexity Low_complexity 1 21 0 2156 128 0 0 chr5 114565903 114566200 -85063950 - AluSx SINE Alu -13 299 3 1895 141 60 20 chr5 114566208 114566555 -85063595 - THE1C LTR MaLR 0 375 15 217 324 0 0 chr5 114566676 114566747 -85063403 + (TA)n Simple_repeat Simple_repeat 2 72 0 1400 224 92 39 chr5 114567620 114568057 -85062093 - MLT1C LTR MaLR -2 465 6 25 31 0 0 chr5 114568805 114568837 -85061313 + AT_rich Low_complexity Low_complexity 1 32 0 246 336 112 0 chr5 114569392 114569526 -85060624 - MIR SINE MIR -107 155 7 528 295 139 24 chr5 114569998 114570249 -85059901 - MER102b DNA MER1_type -51 290 11 180 77 0 0 chr5 114570725 114570751 -85059399 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1077 320 114 57 chr5 114571529 114573086 -85057064 + L2 LINE L2 1326 2972 -342 232 302 191 0 chr5 114573197 114573323 -85056827 + L2 LINE L2 3164 3313 0 1921 175 79 3 chr5 114574418 114574784 -85055366 + MSTD LTR MaLR 1 394 -2 259 322 63 49 chr5 114576374 114576517 -85053633 - MER5A DNA MER1_type -24 165 21 659 270 107 56 chr5 114579255 114579789 -85050361 - MER34B LTR ERV1 0 565 5 825 261 74 26 chr5 114579965 114580275 -85049875 - L2 LINE L2 -79 3234 2910 339 227 118 0 chr5 114580274 114580384 -85049766 + L2 LINE L2 3191 3313 0 * 310 255 32 83 chr5 114582036 114582193 -85047957 - MER5A DNA MER1_type -3 186 38 293 278 8 63 chr5 114582194 114582320 -85047830 - MIR SINE MIR -113 149 31 22 56 0 0 chr5 114583018 114583054 -85047096 + AT_rich Low_complexity Low_complexity 1 36 0 794 281 18 13 chr5 114584140 114584364 -85045786 + MIR SINE MIR 17 241 -21 564 89 13 0 chr5 114584494 114584573 -85045577 - MADE1 DNA Mariner 0 80 1 635 214 50 45 chr5 114584624 114584825 -85045325 - MIR SINE MIR -29 233 32 359 266 21 0 chr5 114585095 114585189 -85044961 + MIR SINE MIR 159 254 -8 182 36 0 36 chr5 114586453 114586481 -85043669 + (CATTT)n Simple_repeat Simple_repeat 2 28 0 265 245 32 21 chr5 114586500 114586594 -85043556 - MIR SINE MIR -164 98 4 379 324 24 47 chr5 114586620 114586790 -85043360 - MIR SINE MIR -34 228 63 195 42 0 0 chr5 114590251 114590275 -85039875 + (A)n Simple_repeat Simple_repeat 1 24 0 2436 80 0 0 chr5 114592835 114593134 -85037016 - AluSg1 SINE Alu -10 299 1 2182 118 0 0 chr5 114593643 114593932 -85036218 + AluSq SINE Alu 1 289 -24 252 0 0 0 chr5 114594939 114594967 -85035183 + (A)n Simple_repeat Simple_repeat 1 28 0 689 211 114 23 chr5 114595038 114595213 -85034937 + MER3 DNA MER1_type 1 191 -18 495 234 172 14 chr5 114595297 114595442 -85034708 + MER5A DNA MER1_type 10 177 -12 667 271 202 27 chr5 114595807 114596213 -85033937 + L2 LINE L2 2837 3313 0 213 254 18 0 chr5 114596289 114596344 -85033806 + L2 LINE L2 2703 2758 -556 996 242 163 35 chr5 114596445 114596850 -85033300 + MLT1L LTR MaLR 41 497 -118 506 196 20 0 chr5 114598548 114598650 -85031500 + MER58B DNA MER1_type 222 325 -16 380 278 26 17 chr5 114598784 114598899 -85031251 + MIR SINE MIR 20 135 -73 1266 232 137 18 chr5 114599952 114600391 -85029759 + MLT1D LTR MaLR 12 502 -3 340 269 134 60 chr5 114601152 114601488 -85028662 + L1MC/D LINE L1 4880 5240 -906 319 306 16 24 chr5 114601495 114601619 -85028531 - L2 LINE L2 0 3313 3191 395 264 101 43 chr5 114601720 114601998 -85028152 + L1MC/D LINE L1 5263 5555 -619 1600 188 25 88 chr5 114602059 114602458 -85027692 + MLT1A2 LTR MaLR 1 374 0 920 230 33 19 chr5 114602557 114602770 -85027380 + MER58A DNA MER1_type 3 218 -6 36 23 0 0 chr5 114602801 114602844 -85027306 + AT_rich Low_complexity Low_complexity 1 43 0 31 0 0 0 chr5 114603097 114603128 -85027022 + AT_rich Low_complexity Low_complexity 1 31 0 320 228 139 40 chr5 114603128 114603229 -85026921 - MIR SINE MIR -103 159 49 180 170 226 0 chr5 114606224 114606277 -85023873 - MIR3 SINE MIR 0 208 144 237 321 46 9 chr5 114606546 114606655 -85023495 + MER5A DNA MER1_type 28 140 -49 22 35 0 0 chr5 114606655 114606684 -85023466 + AT_rich Low_complexity Low_complexity 1 29 0 1090 144 53 29 chr5 114608669 114608877 -85021273 + AluJo SINE Alu 72 284 -28 252 86 0 0 chr5 114608877 114608912 -85021238 + (TAAG)n Simple_repeat Simple_repeat 1 35 0 324 330 20 0 chr5 114608943 114609043 -85021107 - MIR3 SINE MIR -49 159 58 830 239 0 0 chr5 114609575 114609734 -85020416 - FRAM SINE Alu -17 159 1 261 0 0 0 chr5 114613436 114613465 -85016685 + (TG)n Simple_repeat Simple_repeat 1 29 0 374 270 99 0 chr5 114613826 114613937 -85016213 - MIR SINE MIR -82 180 59 27 29 0 0 chr5 114614589 114614623 -85015527 + AT_rich Low_complexity Low_complexity 1 34 0 551 291 98 15 chr5 114614677 114614942 -85015208 - L1ME LINE L1 -344 5777 5491 2251 116 0 0 chr5 114614994 114615297 -85014853 - AluSc SINE Alu -6 303 1 393 319 86 17 chr5 114615307 114615539 -85014611 - MIR SINE MIR -13 249 2 491 213 0 8 chr5 114615745 114615855 -85014295 + (TATATG)n Simple_repeat Simple_repeat 2 112 -10 2390 177 11 49 chr5 114615855 114616306 -85013844 - Tigger2a DNA MER2_type 0 434 1 491 213 0 8 chr5 114616306 114616317 -85013833 + (TATATG)n Simple_repeat Simple_repeat 112 122 0 309 241 21 43 chr5 114616363 114616410 -85013740 - L1ME LINE L1 -273 5848 5802 2629 114 14 25 chr5 114616410 114616778 -85013372 - THE1B LTR MaLR 0 364 1 309 241 21 43 chr5 114616778 114616871 -85013279 - L1ME LINE L1 -319 5802 5711 244 286 32 32 chr5 114616869 114616995 -85013155 + L1ME LINE L1 5668 5793 -377 * 261 0 0 0 chr5 114617073 114617102 -85013048 + (CA)n Simple_repeat Simple_repeat 1 29 0 182 271 14 14 chr5 114617434 114617504 -85012646 + L2 LINE L2 1702 1771 -1543 408 339 44 40 chr5 114617845 114618072 -85012078 + MLT1I LTR MaLR 159 386 -23 464 340 283 19 chr5 114618085 114619042 -85011108 + L2 LINE L2 1767 2976 -338 2681 168 19 0 chr5 114619181 114619605 -85010545 - MSTB1 LTR MaLR 0 432 1 27 29 0 0 chr5 114619769 114619803 -85010347 + AT_rich Low_complexity Low_complexity 1 34 0 310 291 60 22 chr5 114620005 114620139 -85010011 - L1ME LINE L1 -405 5716 5578 212 158 18 0 chr5 114620189 114620246 -85009904 + A-rich Low_complexity Low_complexity 5 62 0 235 276 59 35 chr5 114620425 114620595 -85009555 - L1ME LINE L1 -1215 4931 4758 25 0 0 0 chr5 114620964 114620989 -85009161 + AT_rich Low_complexity Low_complexity 1 25 0 454 272 139 71 chr5 114621801 114622125 -85008025 - MLT1K LTR MaLR -7 581 236 305 336 15 23 chr5 114622171 114622302 -85007848 - MLT1K LTR MaLR -436 152 23 1865 214 33 91 chr5 114622303 114622593 -85007557 + MLT2B1 LTR ERVL 1 245 -275 1903 165 3 7 chr5 114622593 114622902 -85007248 + AluSx SINE Alu 1 308 -4 1865 214 33 91 chr5 114622902 114623163 -85006987 + MLT2B1 LTR ERVL 245 520 0 457 214 0 0 chr5 114623519 114623603 -85006547 - Tigger5 DNA MER2_type 0 2323 2240 2063 200 82 0 chr5 114623615 114624015 -85006135 - Tigger5 DNA MER2_type -1884 439 7 248 200 67 0 chr5 114624453 114624513 -85005637 + MIR SINE MIR 83 146 -62 909 218 35 11 chr5 114624518 114624692 -85005458 + MER45A DNA AcHobo 1 178 0 424 227 53 67 chr5 114624762 114624912 -85005238 + MER103 DNA DNA 19 166 0 203 394 38 15 chr5 114625177 114625309 -85004841 + L2 LINE L2 2875 3009 -263 * 588 369 74 35 chr5 114625287 114626060 -85004090 + L2 LINE L2 2505 3311 -2 191 121 0 155 chr5 114626290 114626348 -85003802 + L2 LINE L2 3264 3312 -1 265 236 125 21 chr5 114626807 114626951 -85003199 + MIR SINE MIR 98 256 -6 1808 141 50 0 chr5 114628059 114628336 -85001814 - AluSx SINE Alu -17 295 5 1432 102 5 0 chr5 114629611 114629816 -85000334 - L1MA3 LINE L1 0 6305 6100 276 308 41 59 chr5 114630012 114630168 -84999982 + MIR SINE MIR 18 175 -67 208 327 52 52 chr5 114630948 114631101 -84999049 + L3 LINE CR1 1419 1571 -6 188 260 0 40 chr5 114631942 114631992 -84998158 + MER5A DNA MER1_type 100 147 -42 186 273 136 34 chr5 114631965 114632053 -84998097 + MIR SINE MIR 77 173 -89 * 2291 288 160 50 chr5 114632145 114633721 -84996429 + L2 LINE L2 1528 3291 -22 236 75 0 25 chr5 114634048 114634088 -84996062 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 246 313 100 0 chr5 114634499 114634579 -84995571 - L2 LINE L2 -19 3294 3207 194 328 31 0 chr5 114636754 114636818 -84993332 + L2 LINE L2 3197 3262 -10 285 242 0 0 chr5 114638562 114638624 -84991526 - L2 LINE L2 0 3272 3211 263 380 64 62 chr5 114638700 114638961 -84991189 + L2 LINE L2 2833 3097 -175 2308 77 0 32 chr5 114638961 114639274 -84990876 - AluY SINE Alu -8 303 1 263 380 64 62 chr5 114639274 114639451 -84990699 + L2 LINE L2 3097 3272 0 395 281 219 5 chr5 114639508 114639700 -84990450 - MIR SINE MIR -12 250 18 2140 141 18 59 chr5 114640410 114640801 -84989349 + THE1C LTR MaLR 1 375 0 10528 131 31 18 chr5 114640801 114642361 -84987789 + THE1C-int LTR MaLR 1 1580 0 2297 130 15 56 chr5 114642361 114642752 -84987398 + THE1C LTR MaLR 1 375 0 5662 128 4 0 chr5 114642928 114643762 -84986388 - L1PA15 LINE L1 -13 6152 5314 21 0 0 0 chr5 114643743 114643764 -84986386 + AT_rich Low_complexity Low_complexity 1 21 0 * 213 310 115 9 chr5 114644665 114644778 -84985372 - L2 LINE L2 -191 3081 2957 1598 177 20 10 chr5 114645939 114646233 -84983917 - AluJo SINE Alu -15 297 1 237 190 0 35 chr5 114646869 114646927 -84983223 + (TCTCTG)n Simple_repeat Simple_repeat 2 57 0 224 245 0 0 chr5 114648226 114648279 -84981871 - L2 LINE L2 -71 3242 3190 198 316 129 32 chr5 114648371 114648526 -84981624 + MIR3 SINE MIR 2 171 -37 265 196 22 0 chr5 114649397 114649443 -84980707 + L2 LINE L2 3244 3290 -23 1046 106 0 0 chr5 114650408 114650549 -84979601 + AluSg/x SINE Alu 157 297 -15 383 216 35 72 chr5 114650698 114650843 -84979307 - L1MC4 LINE L1 -2 8040 7783 280 247 49 0 chr5 114650888 114650969 -84979181 - L1MC4 LINE L1 -145 7897 7813 1610 175 23 3 chr5 114650969 114651278 -84978872 - MLT1A1 LTR MaLR -50 315 1 1550 209 84 12 chr5 114651338 114651768 -84978382 - L1MC4 LINE L1 -414 7628 7168 452 219 78 23 chr5 114652364 114652492 -84977658 - MIR SINE MIR -48 214 80 205 222 56 37 chr5 114653017 114653071 -84977079 + MIR3 SINE MIR 129 183 -25 531 322 8 30 chr5 114653993 114654260 -84975890 - MIR SINE MIR 0 262 2 758 189 8 0 chr5 114655238 114655370 -84974780 - FLAM_C SINE Alu 0 133 1 490 272 136 38 chr5 114655889 114656073 -84974077 + MIR SINE MIR 28 229 -33 429 20 0 0 chr5 114656161 114656211 -84973939 + (TG)n Simple_repeat Simple_repeat 1 50 0 239 288 18 9 chr5 114657065 114657176 -84972974 - L1ME LINE L1 -429 5692 5581 22 70 0 0 chr5 114657641 114657684 -84972466 + AT_rich Low_complexity Low_complexity 1 43 0 377 268 75 143 chr5 114658232 114658713 -84971437 - L3 LINE CR1 -355 1222 775 968 266 118 55 chr5 114662087 114662622 -84967528 - MLT1F1 LTR MaLR -5 562 1 274 291 15 75 chr5 114662844 114662978 -84967172 + MLT1K LTR MaLR 117 242 -346 3426 153 57 20 chr5 114663219 114663982 -84966168 - L1MB8 LINE L1 -19 6159 5308 2153 115 0 0 chr5 114664075 114664362 -84965788 - AluSg SINE Alu -23 287 1 380 276 21 55 chr5 114664481 114664626 -84965524 + MLT1H1 LTR MaLR 42 181 -374 330 254 101 0 chr5 114664730 114664868 -84965282 - L1ME4a LINE L1 0 6121 5970 192 183 0 100 chr5 114668503 114668563 -84961587 - MIR3 SINE MIR -15 193 140 684 292 165 5 chr5 114669082 114669519 -84960631 - L2 LINE L2 -57 3256 2749 529 226 304 0 chr5 114669545 114669726 -84960424 - MIR SINE MIR -10 252 17 319 296 100 66 chr5 114669796 114670242 -84959908 + L2 LINE L2 2738 3208 -105 335 356 128 39 chr5 114670701 114671061 -84959089 - L2 LINE L2 0 3272 2881 211 313 0 0 chr5 114672939 114673003 -84957147 + (TA)n Simple_repeat Simple_repeat 1 64 0 190 97 48 32 chr5 114673038 114673100 -84957050 + (TA)n Simple_repeat Simple_repeat 2 64 0 412 309 111 14 chr5 114673389 114673606 -84956544 - MIR SINE MIR -13 249 12 559 290 137 10 chr5 114673837 114674069 -84956081 + MIR SINE MIR 3 262 0 994 203 39 35 chr5 114674293 114674525 -84955625 - MIR SINE MIR -2 260 28 1895 162 51 17 chr5 114675006 114675357 -84954793 + MLT1A1 LTR MaLR 3 365 0 1044 193 17 0 chr5 114676525 114676701 -84953449 + MER5A DNA MER1_type 6 184 -5 337 244 65 88 chr5 114677594 114677811 -84952339 - L1MEc LINE L1 -4169 2227 2016 847 282 88 13 chr5 114678086 114678561 -84951589 - L1MEc LINE L1 -4640 1756 1246 246 250 16 0 chr5 114678597 114678661 -84951489 + T-rich Low_complexity Low_complexity 1 65 0 240 214 0 0 chr5 114678697 114678739 -84951411 + L2 LINE L2 3226 3267 -5 292 343 55 14 chr5 114678811 114678957 -84951193 - MIR3 SINE MIR -48 160 9 180 152 0 0 chr5 114681019 114681052 -84949098 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 1642 266 78 17 chr5 114681092 114681973 -84948177 - L2 LINE L2 -52 3261 2323 42 20 0 0 chr5 114682776 114682825 -84947325 + AT_rich Low_complexity Low_complexity 1 49 0 234 240 0 0 chr5 114683404 114683454 -84946696 + (TG)n Simple_repeat Simple_repeat 1 50 0 584 106 11 0 chr5 114684232 114684326 -84945824 + (TTCC)n Simple_repeat Simple_repeat 4 98 0 2837 7 0 0 chr5 114684549 114684856 -84945294 - AluYa5 SINE Alu -4 307 1 182 373 0 13 chr5 114684856 114684920 -84945230 - MIR SINE MIR -43 219 155 237 298 53 26 chr5 114684943 114685057 -84945093 - MLT1K LTR MaLR -50 538 422 403 295 9 19 chr5 114685301 114685406 -84944744 + MIR SINE MIR 20 123 -139 192 77 0 0 chr5 114685594 114685620 -84944530 + (T)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr5 114685762 114685783 -84944367 + AT_rich Low_complexity Low_complexity 1 21 0 393 290 94 49 chr5 114686605 114686829 -84943321 + L3 LINE CR1 1202 1435 -142 653 259 63 72 chr5 114687052 114687384 -84942766 - MER102b DNA MER1_type -12 329 1 387 337 39 10 chr5 114687681 114687886 -84942264 + MIR SINE MIR 34 244 -18 230 374 103 13 chr5 114690228 114690383 -84939767 - L2 LINE L2 -1 3271 3103 * 240 376 93 25 chr5 114690380 114690659 -84939491 + L2 LINE L2 2680 2977 -337 319 329 159 0 chr5 114691030 114691200 -84938950 - MIR SINE MIR -7 255 59 513 286 14 0 chr5 114691365 114691505 -84938645 + MIR SINE MIR 112 253 -9 186 238 60 48 chr5 114691445 114691529 -84938621 - MIR SINE MIR -5 257 173 * 2221 87 40 7 chr5 114692120 114692419 -84937731 - AluSx SINE Alu -2 310 2 717 181 67 0 chr5 114692479 114692628 -84937522 + MER105 DNA DNA 4 162 -42 411 147 0 0 chr5 114692711 114692779 -84937371 + MER116 DNA Mariner 7 74 -6 297 264 88 0 chr5 114692823 114692971 -84937179 - L1ME LINE L1 -710 5454 5294 304 289 75 20 chr5 114693097 114693402 -84936748 - L1ME LINE L1 -1028 5118 4797 1444 224 34 65 chr5 114694001 114694568 -84935582 - L1MC5 LINE L1 -537 7424 6876 276 261 80 11 chr5 114694584 114694647 -84935503 + MER45B DNA AcHobo 2 70 -970 1153 204 125 43 chr5 114694647 114695061 -84935089 - MLT1C LTR MaLR 0 467 16 * 4053 204 73 11 chr5 114695050 114695991 -84934159 + MER45B DNA AcHobo 41 1040 0 848 220 18 22 chr5 114695993 114696216 -84933934 - L1MC5 LINE L1 -1069 6892 6671 1666 206 23 11 chr5 114696222 114696571 -84933579 + MLT1A1 LTR MaLR 1 353 -12 2373 252 84 33 chr5 114696629 114696907 -84933243 - L1ME3A LINE L1 0 6239 5977 306 0 0 0 chr5 114696907 114696941 -84933209 + (TAA)n Simple_repeat Simple_repeat 3 36 0 2373 252 84 33 chr5 114696941 114697878 -84932272 - L1ME3A LINE L1 -262 5977 4960 * 3969 203 31 36 chr5 114697876 114699140 -84931010 - L1MA9 LINE L1 -39 6273 5018 398 232 123 100 chr5 114699138 114699706 -84930444 - L1ME3A LINE L1 -1225 4990 4410 * 471 246 144 41 chr5 114699729 114700057 -84930093 - LTR40c LTR ERVL -30 435 115 2006 292 45 15 chr5 114700201 114701068 -84929082 - L1ME3A LINE L1 -1880 4335 3443 654 263 138 57 chr5 114701088 114701789 -84928361 - L1ME3A LINE L1 -3012 3203 2418 1908 140 70 20 chr5 114701789 114702146 -84928004 + THE1C LTR MaLR 1 375 0 654 263 138 57 chr5 114702146 114702305 -84927845 - L1ME3A LINE L1 -3797 2418 2273 434 297 62 10 chr5 114702319 114702511 -84927639 - L1ME3A LINE L1 -4094 2302 2101 357 283 140 25 chr5 114702715 114702994 -84927156 - L1ME3A LINE L1 -4579 1817 1507 22 56 0 0 chr5 114703091 114703127 -84927023 + AT_rich Low_complexity Low_complexity 1 36 0 2160 117 3 0 chr5 114703204 114703502 -84926648 + AluSp SINE Alu 1 299 -14 264 130 0 0 chr5 114703693 114703739 -84926411 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 573 276 21 16 chr5 114704560 114704752 -84925398 - L1ME3A LINE L1 -6166 230 38 1721 165 0 17 chr5 114705583 114705874 -84924276 - AluJb SINE Alu -26 286 1 2123 71 4 4 chr5 114706613 114706882 -84923268 + AluY SINE Alu 30 298 -13 1997 150 26 184 chr5 114706887 114707118 -84923032 + L1MA9 LINE L1 5631 5897 -415 192 77 0 0 chr5 114707118 114707144 -84923006 + (TA)n Simple_repeat Simple_repeat 2 27 0 1997 150 26 184 chr5 114707144 114707497 -84922653 + L1MA9 LINE L1 5897 6068 -244 2050 99 111 101 chr5 114707497 114707921 -84922229 + MSTA LTR MaLR 1 428 0 1997 150 26 184 chr5 114707921 114708100 -84922050 + L1MA9 LINE L1 6068 6274 -38 2323 153 36 22 chr5 114708471 114708884 -84921266 - MSTB LTR MaLR 0 426 8 3683 174 41 8 chr5 114711479 114712191 -84917959 - L1MB7 LINE L1 -19 6165 5431 438 83 0 0 chr5 114713223 114713283 -84916867 - MADE1 DNA Mariner -20 60 1 680 303 33 21 chr5 114713537 114713778 -84916372 - MIR SINE MIR -8 254 11 419 0 20 0 chr5 114714039 114714090 -84916060 + (TG)n Simple_repeat Simple_repeat 2 53 0 1634 201 15 50 chr5 114714873 114715277 -84914873 - MLT1B LTR MaLR 0 390 1 220 308 92 39 chr5 114715277 114715396 -84914754 - L2 LINE L2 -8 3264 3136 23 33 0 0 chr5 114716252 114716282 -84913868 + AT_rich Low_complexity Low_complexity 1 30 0 1274 147 71 75 chr5 114716419 114716719 -84913431 + AluJb SINE Alu 23 321 0 676 273 76 25 chr5 114717665 114717903 -84912247 + MIR SINE MIR 13 262 0 486 297 80 59 chr5 114718348 114718587 -84911563 - MLT1K LTR MaLR -341 247 4 402 336 39 92 chr5 114721064 114721475 -84908675 + L2 LINE L2 2834 3222 -50 221 312 75 21 chr5 114722384 114722477 -84907673 - L2 LINE L2 -16 3256 3159 211 291 0 0 chr5 114723440 114723495 -84906655 + L2 LINE L2 3252 3306 -7 378 0 0 0 chr5 114723672 114723714 -84906436 + (TG)n Simple_repeat Simple_repeat 1 42 0 267 263 17 17 chr5 114724730 114724848 -84905302 + L1MC4 LINE L1 7925 8042 0 633 239 46 64 chr5 114725577 114725795 -84904355 + MER58C DNA MER1_type 2 215 0 462 341 6 0 chr5 114725801 114725974 -84904176 - MIR SINE MIR -42 220 47 2247 177 10 7 chr5 114725974 114726387 -84903763 - MLT2D LTR ERVL 0 414 1 1774 174 21 3 chr5 114726677 114727011 -84903139 + Tigger2 DNA MER2_type 1 340 -2378 * 1802 143 10 0 chr5 114727005 114727299 -84902851 + Tigger2 DNA MER2_type 2422 2718 0 21 36 0 0 chr5 114727496 114727524 -84902626 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 114727559 114727588 -84902562 + AT_rich Low_complexity Low_complexity 1 29 0 2253 75 8 0 chr5 114727668 114728147 -84902003 - L1PA7 LINE L1 0 6154 5586 4140 76 17 0 chr5 114728148 114729107 -84901043 - L1PA7 LINE L1 -329 6140 5169 1163 72 26 0 chr5 114729130 114729283 -84900867 + MER11A LTR ERVK 1110 1266 0 4198 71 0 2 chr5 114729284 114729832 -84900318 - L1PA7 LINE L1 -5135 1326 780 198 0 0 0 chr5 114730365 114730387 -84899763 + (T)n Simple_repeat Simple_repeat 1 22 0 279 208 146 85 chr5 114731510 114731640 -84898510 - L2 LINE L2 -1 3312 3175 2250 135 14 6 chr5 114731649 114732011 -84898139 + MER47A DNA MER2_type 2 366 0 974 164 12 0 chr5 114732025 114732190 -84897960 - MLT1A1 LTR MaLR 0 365 199 180 0 0 0 chr5 114732280 114732300 -84897850 + (TA)n Simple_repeat Simple_repeat 2 21 0 248 278 0 0 chr5 114732300 114732390 -84897760 - L1MC4 LINE L1 -1339 6703 6614 216 158 0 0 chr5 114732395 114732433 -84897717 + (TA)n Simple_repeat Simple_repeat 1 38 0 1964 60 0 12 chr5 114732438 114732688 -84897462 - L1PA7 LINE L1 -18 6136 5890 873 185 0 0 chr5 114732690 114732841 -84897309 - MLT1A1 LTR MaLR -214 151 1 1245 254 86 21 chr5 114733343 114733808 -84896342 - L1ME3A LINE L1 -105 6065 5571 1125 301 30 14 chr5 114733802 114734310 -84895840 - L1ME3A LINE L1 -983 5163 4648 * 730 262 56 56 chr5 114734354 114734869 -84895281 - L1ME3A LINE L1 -1595 4551 4037 767 315 131 50 chr5 114736390 114737190 -84892960 + L2 LINE L2 1234 2098 -1216 6604 50 0 0 chr5 114737218 114738033 -84892117 + L1PA5 LINE L1 5340 6154 0 5094 157 36 12 chr5 114738070 114738636 -84891514 + L1PA16 LINE L1 4906 5457 -709 2163 132 0 0 chr5 114738636 114738939 -84891211 + AluSg SINE Alu 1 303 -7 5094 157 36 12 chr5 114738939 114739597 -84890553 + L1PA16 LINE L1 5457 6146 -20 30 0 0 0 chr5 114739620 114739650 -84890500 + AT_rich Low_complexity Low_complexity 1 30 0 247 340 19 6 chr5 114740109 114740265 -84889885 + L1ME3A LINE L1 4552 4709 -1437 647 140 0 9 chr5 114740270 114740377 -84889773 - MSTB2 LTR MaLR -18 439 334 1062 152 71 43 chr5 114740389 114740600 -84889550 - MSTB2 LTR MaLR -240 217 1 287 284 74 20 chr5 114740613 114740761 -84889389 + L1ME3A LINE L1 4715 4870 -1276 352 304 87 1 chr5 114741261 114741472 -84888678 + L1ME3A LINE L1 4862 5090 -1056 2183 259 67 57 chr5 114741493 114742463 -84887687 + L1PA12 LINE L1 2 1825 -5756 6068 219 22 45 chr5 114742535 114744226 -84885924 + L1PA15 LINE L1 1607 3264 -4320 2226 67 40 13 chr5 114744226 114744526 -84885624 - AluY SINE Alu -2 309 2 6068 219 22 45 chr5 114744526 114744865 -84885285 + L1PA15 LINE L1 3264 3609 -3975 1043 253 0 0 chr5 114744868 114745109 -84885041 - L1PA15-16 LINE L1 -4396 2453 2213 * 12450 218 26 5 chr5 114745103 114746607 -84883543 + L1PA15 LINE L1 3627 5099 -2485 2263 106 0 10 chr5 114746607 114746919 -84883231 + AluY SINE Alu 1 309 -2 12450 218 26 5 chr5 114746919 114748474 -84881676 + L1PA15 LINE L1 5099 6749 -835 942 92 55 31 chr5 114748474 114748637 -84881513 + MSTA LTR MaLR 1 167 -261 * 991 135 19 0 chr5 114748613 114748769 -84881381 + MSTA LTR MaLR 270 428 0 5256 126 14 0 chr5 114748769 114749613 -84880537 + L1PA15 LINE L1 6745 7600 -3 366 291 19 14 chr5 114749636 114749846 -84880304 + L1ME3A LINE L1 5119 5329 -817 2416 159 29 5 chr5 114750164 114750580 -84879570 + MSTB LTR MaLR 1 426 0 762 137 114 2 chr5 114751024 114751281 -84878869 + L1M1 LINE L1 5157 5445 -743 619 324 104 25 chr5 114751281 114751995 -84878155 - L2 LINE L2 -6 3307 2531 333 307 104 26 chr5 114752902 114753094 -84877056 - L2 LINE L2 -225 3047 2841 199 362 35 0 chr5 114753214 114753355 -84876795 - L2 LINE L2 -1121 2193 2048 406 276 46 79 chr5 114753545 114753849 -84876301 + MLT1J1 LTR MaLR 1 294 -152 846 241 121 55 chr5 114753889 114754467 -84875683 - L1MCa LINE L1 -4772 2169 1554 1223 274 32 19 chr5 114754505 114754673 -84875477 - L1MCa LINE L1 -5155 1268 1104 1988 144 7 3 chr5 114754673 114754965 -84875185 + AluSx SINE Alu 1 293 -19 1223 274 32 19 chr5 114754965 114755263 -84874887 - L1MCa LINE L1 -5319 1104 796 600 306 27 51 chr5 114755267 114755603 -84874547 + MLT1I LTR MaLR 82 409 0 240 315 24 8 chr5 114755812 114755939 -84874211 + L1ME3A LINE L1 5544 5672 -498 314 257 30 0 chr5 114755971 114756072 -84874078 + L1ME3A LINE L1 5773 5876 -294 376 310 138 68 chr5 114756957 114757383 -84872767 + L2 LINE L2 2812 3267 -5 406 333 90 7 chr5 114757597 114757741 -84872409 + L2 LINE L2 3117 3272 0 1530 206 32 19 chr5 114760742 114761111 -84869039 - MLT1C LTR MaLR 0 467 94 235 255 80 96 chr5 114761288 114761539 -84868611 - MLT1L LTR MaLR 0 526 265 1929 123 11 4 chr5 114761764 114762041 -84868109 - AluSx SINE Alu -30 282 4 289 253 0 0 chr5 114762146 114762221 -84867929 - L1ME LINE L1 -309 5812 5738 273 311 124 53 chr5 114764002 114764152 -84865998 - L2 LINE L2 -5 3267 3096 285 98 0 0 chr5 114764152 114764193 -84865957 + (TG)n Simple_repeat Simple_repeat 1 41 0 273 311 124 53 chr5 114764193 114764251 -84865899 - L2 LINE L2 -176 3096 3044 1465 192 7 110 chr5 114764292 114764709 -84865441 - MLT1A2 LTR MaLR 0 374 1 375 229 0 36 chr5 114764930 114765013 -84865137 + MIR3 SINE MIR 100 179 -29 304 260 39 0 chr5 114765013 114765090 -84865060 + CT-rich Low_complexity Low_complexity 2 81 0 2140 86 4 0 chr5 114765101 114765381 -84864769 + L1PA11 LINE L1 5886 6166 -8 722 193 12 12 chr5 114765506 114765677 -84864473 - MLT1C LTR MaLR -221 246 76 4261 128 40 39 chr5 114766088 114766911 -84863239 + L1PA16 LINE L1 5334 6157 -9 25 31 0 0 chr5 114766911 114766943 -84863207 + AT_rich Low_complexity Low_complexity 1 32 0 318 107 0 0 chr5 114767888 114767944 -84862206 + (CA)n Simple_repeat Simple_repeat 2 57 0 266 263 0 25 chr5 114768080 114768160 -84861990 - MIR SINE MIR -1 261 184 3067 140 30 9 chr5 114768823 114769381 -84860769 - L1PA11 LINE L1 0 6174 5605 444 306 17 40 chr5 114770541 114770714 -84859436 - MER5B DNA MER1_type -6 172 4 29 28 0 0 chr5 114770837 114770873 -84859277 + AT_rich Low_complexity Low_complexity 1 36 0 685 284 49 9 chr5 114770898 114771123 -84859027 + MIR SINE MIR 12 245 -17 209 376 32 0 chr5 114771214 114771307 -84858843 - L2 LINE L2 0 3313 3218 253 331 92 37 chr5 114772173 114772336 -84857814 - L3 LINE CR1 -986 591 420 553 232 95 18 chr5 114773635 114773803 -84856347 + MIR SINE MIR 7 187 -75 188 135 27 0 chr5 114773817 114773854 -84856296 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1739 175 61 9 chr5 114774199 114774525 -84855625 - MER61A LTR ERV1 0 343 1 412 267 0 20 chr5 114774899 114775000 -84855150 + MER5A DNA MER1_type 11 109 -80 324 0 0 0 chr5 114775996 114776032 -84854118 + (CA)n Simple_repeat Simple_repeat 2 37 0 3956 95 6 6 chr5 114776280 114776829 -84853321 + MER41A LTR ERV1 5 553 -1 376 200 133 0 chr5 114776856 114776931 -84853219 + MIR3 SINE MIR 72 156 -52 282 255 84 74 chr5 114777043 114777211 -84852939 + MIR SINE MIR 11 181 -62 246 294 185 8 chr5 114777372 114777491 -84852659 + MER5B DNA MER1_type 39 178 0 2255 87 23 0 chr5 114778163 114778462 -84851688 + AluY SINE Alu 1 306 -5 717 53 0 0 chr5 114778848 114778942 -84851208 + (GA)n Simple_repeat Simple_repeat 1 94 0 336 102 0 0 chr5 114779467 114779516 -84850634 + (TG)n Simple_repeat Simple_repeat 1 49 0 376 291 68 32 chr5 114779535 114779786 -84850364 - L1MC4a LINE L1 -1868 5940 5681 269 263 149 18 chr5 114780774 114780888 -84849262 - MLT1K LTR MaLR -203 385 257 232 351 63 0 chr5 114780981 114781092 -84849058 + MIR3 SINE MIR 70 187 -21 280 327 82 0 chr5 114782598 114782708 -84847442 - L2 LINE L2 -11 3302 3184 947 229 90 66 chr5 114782792 114783258 -84846892 - MLT1E LTR MaLR 0 654 53 2858 250 52 8 chr5 114783277 114784118 -84846032 + ERVL LTR ERVL 4474 5351 -413 37 23 0 0 chr5 114784133 114784177 -84845973 + AT_rich Low_complexity Low_complexity 1 44 0 2061 194 45 13 chr5 114784249 114784698 -84845452 - MLT1D LTR MaLR -11 494 32 1005 313 55 30 chr5 114785005 114785475 -84844675 + MLT2F LTR ERVL 17 498 -165 1906 143 61 0 chr5 114785547 114785875 -84844275 + MER7A DNA MER2_type 1 346 0 355 200 0 13 chr5 114786337 114786412 -84843738 + MER20 DNA MER1_type 16 89 -130 2394 207 20 6 chr5 114786412 114786905 -84843245 - MLT1D LTR MaLR 0 505 6 566 202 24 0 chr5 114786910 114787034 -84843116 + MER20 DNA MER1_type 89 215 -4 305 215 65 9 chr5 114787498 114787605 -84842545 - L1MA9 LINE L1 -38 6274 6162 13191 174 34 7 chr5 114787709 114792405 -84837745 - L1MA2 LINE L1 -32 7691 2886 5172 197 26 16 chr5 114792404 114792789 -84837361 - L1MA2 LINE L1 -6421 1144 764 * 2611 117 3 5 chr5 114792789 114793165 -84836985 + THE1C LTR MaLR 1 375 0 5172 197 26 16 chr5 114793165 114793898 -84836252 - L1MA2 LINE L1 -6801 764 15 24 32 0 0 chr5 114794063 114794094 -84836056 + AT_rich Low_complexity Low_complexity 1 31 0 12046 128 9 8 chr5 114794107 114797494 -84832656 - L1PA10 LINE L1 -11 6472 3075 10179 102 5 1 chr5 114797510 114799775 -84830375 - L1PA7 LINE L1 0 6154 3880 14311 153 114 44 chr5 114799775 114801134 -84829016 - L1P3 LINE L1 -1053 5408 4145 7584 106 13 3 chr5 114801134 114803040 -84827110 - L1PA7 LINE L1 0 6154 4220 14311 153 114 44 chr5 114803040 114806602 -84823548 - L1P3 LINE L1 -2316 4145 8 8186 206 16 46 chr5 114806610 114809334 -84820816 - L1PA10 LINE L1 -3371 3090 383 2504 211 23 7 chr5 114809329 114809889 -84820261 - L1PA10 LINE L1 -5305 570 2 * 1282 36 0 6 chr5 114810318 114810484 -84819666 - L1PA6 LINE L1 -282 5872 5708 1567 83 5 0 chr5 114810484 114810693 -84819457 + L1PA6 LINE L1 5935 6153 -1 1865 255 72 5 chr5 114812196 114812948 -84817202 - L1M4 LINE L1 -864 5282 4481 5999 146 52 46 chr5 114813606 114817292 -84812858 - L1PA11 LINE L1 0 6174 2136 661 136 36 9 chr5 114817292 114817402 -84812748 - AluSg/x SINE Alu -21 291 179 5999 146 52 46 chr5 114817402 114818264 -84811886 - L1PA11 LINE L1 -4038 2136 1280 1938 141 56 31 chr5 114818332 114818687 -84811463 + THE1B LTR MaLR 1 364 0 303 345 123 6 chr5 114819422 114819764 -84810386 + L1ME LINE L1 5362 5741 -380 578 271 165 22 chr5 114819832 114820105 -84810045 + MLT1J2 LTR MaLR 139 450 0 25 0 0 0 chr5 114820393 114820418 -84809732 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr5 114822959 114822988 -84807162 + AT_rich Low_complexity Low_complexity 1 29 0 239 380 76 45 chr5 114823404 114823759 -84806391 + L2 LINE L2 2885 3250 -22 344 289 158 0 chr5 114824020 114824134 -84806016 + L2 LINE L2 3137 3268 -4 256 330 51 45 chr5 114824598 114824774 -84805376 + MIR SINE MIR 16 192 -70 404 349 40 0 chr5 114825250 114825376 -84804774 - L2 LINE L2 -5 3267 3137 2927 176 44 40 chr5 114825392 114825628 -84804522 - MER67C LTR ERV1 0 710 477 2207 98 0 3 chr5 114825628 114825949 -84804201 + AluSq SINE Alu 3 322 0 2927 176 44 40 chr5 114825949 114826390 -84803760 - MER67C LTR ERV1 -233 477 27 312 205 26 26 chr5 114826685 114826763 -84803387 + L2 LINE L2 3193 3270 -2 218 287 61 78 chr5 114827942 114828057 -84802093 + MIR SINE MIR 31 143 -65 21 0 0 0 chr5 114828555 114828576 -84801574 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 114829231 114829252 -84800898 + AT_rich Low_complexity Low_complexity 1 21 0 29 28 0 0 chr5 114830746 114830782 -84799368 + AT_rich Low_complexity Low_complexity 1 36 0 240 163 0 0 chr5 114830946 114830989 -84799161 + (ATGGTG)n Simple_repeat Simple_repeat 5 47 0 869 309 23 4 chr5 114830993 114831249 -84798901 - MIR SINE MIR -1 261 1 207 279 73 44 chr5 114832015 114832083 -84798067 - L2 LINE L2 -24 3248 3179 196 217 0 50 chr5 114832540 114832600 -84797550 - L2 LINE L2 0 3313 3257 208 383 44 22 chr5 114832622 114832805 -84797345 + MIR3 SINE MIR 13 199 -9 838 178 52 100 chr5 114832838 114833068 -84797082 + MER20 DNA MER1_type 1 219 0 26 0 0 0 chr5 114833927 114833953 -84796197 + AT_rich Low_complexity Low_complexity 1 26 0 2313 180 34 5 chr5 114834379 114834791 -84795359 + MSTB LTR MaLR 2 425 -1 248 109 0 22 chr5 114835049 114835095 -84795055 + (TC)n Simple_repeat Simple_repeat 2 46 0 206 429 29 0 chr5 114835273 114835378 -84794772 + MIR SINE MIR 40 147 -61 465 329 30 17 chr5 114838535 114838769 -84791381 + MER115 DNA AcHobo 10 246 -447 346 218 186 8 chr5 114839770 114839894 -84790256 - L1ME LINE L1 -458 5663 5518 21062 183 24 24 chr5 114840053 114841332 -84788818 - L1PA13 LINE L1 -2 6476 5198 1872 133 3 50 chr5 114841332 114841634 -84788516 - AluSx SINE Alu -4 308 21 21062 183 24 24 chr5 114841634 114846814 -84783336 - L1PA13 LINE L1 -1280 5198 10 6826 200 20 9 chr5 114846824 114848808 -84781342 - L1PA13 LINE L1 -3625 3172 1164 180 333 77 0 chr5 114849568 114849646 -84780504 - L2 LINE L2 0 3313 3230 2129 108 20 3 chr5 114850335 114850632 -84779518 + AluY SINE Alu 1 302 -9 607 301 69 9 chr5 114850632 114850848 -84779302 + LTR33 LTR ERVL 12 240 -281 1445 198 17 0 chr5 114851275 114851573 -84778577 - L1MB1 LINE L1 -2500 3646 3344 * 2243 188 28 2 chr5 114851572 114852009 -84778141 + L1MB1 LINE L1 3645 4092 -2054 * 2773 185 49 7 chr5 114852008 114852948 -84777202 + L1MB1 LINE L1 4792 5778 -390 1926 104 0 15 chr5 114852948 114853216 -84776934 + AluSc SINE Alu 38 301 -8 418 241 14 14 chr5 114853245 114853390 -84776760 + (CATATA)n Simple_repeat Simple_repeat 2 146 0 426 343 11 28 chr5 114853426 114853607 -84776543 + (CATG)n Simple_repeat Simple_repeat 3 180 0 1862 155 44 17 chr5 114853629 114853990 -84776160 + L1MB1 LINE L1 5795 6165 -3 781 242 0 56 chr5 114854052 114854304 -84775846 + L1MC4 LINE L1 7693 7930 -112 342 353 56 36 chr5 114854487 114854908 -84775242 + ERVL LTR ERVL 980 1445 -4245 914 323 22 11 chr5 114855067 114855620 -84774530 + ERVL LTR ERVL 1615 2237 -3527 * 1466 324 65 17 chr5 114855598 114856258 -84773892 + ERVL LTR ERVL 3641 4332 -1432 546 326 58 41 chr5 114856815 114857158 -84772992 + ERVL LTR ERVL 4975 5323 -441 448 256 108 0 chr5 114857429 114857558 -84772592 + LTR33 LTR ERVL 3 145 -376 225 0 0 0 chr5 114857813 114857838 -84772312 + (A)n Simple_repeat Simple_repeat 1 25 0 218 309 96 11 chr5 114857998 114858092 -84772058 - MIR3 SINE MIR -18 190 89 210 375 80 0 chr5 114858377 114858465 -84771685 + L2 LINE L2 3158 3252 -20 363 270 0 10 chr5 114859723 114859823 -84770327 + L1MC4 LINE L1 6609 6707 -1335 * 369 219 15 164 chr5 114859763 114859964 -84770186 - L1MC4 LINE L1 -1339 6703 6533 260 294 24 71 chr5 114860921 114861047 -84769103 - L2 LINE L2 0 3272 3153 48 53 0 0 chr5 114861194 114861270 -84768880 + AT_rich Low_complexity Low_complexity 1 76 0 203 266 128 11 chr5 114861867 114861961 -84768189 - MIR SINE MIR -48 214 110 239 337 116 23 chr5 114862326 114862498 -84767652 - MIR SINE MIR -28 234 47 315 301 150 0 chr5 114863131 114863284 -84766866 - MIR SINE MIR 0 262 87 233 320 0 0 chr5 114864021 114864099 -84766051 - MLT1K LTR MaLR -2 586 509 23 33 0 0 chr5 114864798 114864828 -84765322 + AT_rich Low_complexity Low_complexity 1 30 0 414 309 169 20 chr5 114864995 114865452 -84764698 + L2 LINE L2 2087 2611 -703 1789 206 34 14 chr5 114865453 114865871 -84764279 - L1MD3 LINE L1 0 7995 7570 278 379 36 23 chr5 114865878 114866097 -84764053 + L2 LINE L2 2599 2820 -494 308 274 7 67 chr5 114866185 114866320 -84763830 - MIR SINE MIR -79 183 57 447 19 0 0 chr5 114967688 114967740 -84662410 + (CA)n Simple_repeat Simple_repeat 1 52 0 373 21 0 21 chr5 114967991 114968039 -84662111 + (TG)n Simple_repeat Simple_repeat 2 48 0 398 179 71 136 chr5 114969169 114969309 -84660841 + FLAM_A SINE Alu 1 131 -2 256 231 139 37 chr5 114969430 114969538 -84660612 - FLAM_C SINE Alu -8 125 7 268 189 163 13 chr5 114970177 114970269 -84659881 + AluSg SINE Alu 1 90 -210 435 295 85 40 chr5 114973441 114973641 -84656509 + MIR SINE MIR 6 214 -48 384 22 0 0 chr5 114973657 114973702 -84656448 + (TG)n Simple_repeat Simple_repeat 2 46 0 332 73 36 0 chr5 114974797 114974852 -84655298 + (TCTCTG)n Simple_repeat Simple_repeat 2 58 0 573 42 0 0 chr5 114976633 114976705 -84653445 + (TC)n Simple_repeat Simple_repeat 1 72 0 531 170 0 0 chr5 114977355 114977455 -84652695 + CT-rich Low_complexity Low_complexity 3 102 0 180 354 62 10 chr5 114977468 114977564 -84652586 - L2 LINE L2 -76 3196 3096 361 291 27 61 chr5 114977607 114977755 -84652395 - MER5B DNA MER1_type -2 176 34 231 250 0 0 chr5 114978044 114978096 -84652054 + Tigger3(Golem) DNA MER2_type 2846 2897 -132 351 0 0 0 chr5 114978532 114978571 -84651579 + (CA)n Simple_repeat Simple_repeat 2 40 0 246 174 0 0 chr5 114978571 114978617 -84651533 + GA-rich Low_complexity Low_complexity 1 46 0 180 0 0 0 chr5 114981124 114981144 -84649006 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 295 244 96 19 chr5 114982480 114982609 -84647541 + AluJ/FLAM SINE Alu 2 95 -207 546 29 0 0 chr5 114986079 114986147 -84644003 + (TG)n Simple_repeat Simple_repeat 1 68 0 290 260 140 0 chr5 114986351 114986451 -84643699 + FLAM_A SINE Alu 8 121 -12 237 245 0 0 chr5 114990482 114990499 -84639651 + A-rich Low_complexity Low_complexity 1 17 -36 392 185 20 146 chr5 114990499 114990650 -84639500 + FLAM_C SINE Alu 2 133 0 237 245 0 0 chr5 114990650 114990685 -84639465 + A-rich Low_complexity Low_complexity 16 53 0 213 39 0 0 chr5 114991002 114991028 -84639122 + (TCC)n Simple_repeat Simple_repeat 2 27 0 207 191 118 88 chr5 114992999 114993067 -84637083 + MIR SINE MIR 13 82 -180 666 0 0 0 chr5 114993123 114993197 -84636953 + (GAA)n Simple_repeat Simple_repeat 2 75 0 284 352 0 0 chr5 114993381 114993489 -84636661 + (TAGA)n Simple_repeat Simple_repeat 1 108 0 706 220 10 3 chr5 114993491 114993791 -84636359 + (TGGA)n Simple_repeat Simple_repeat 1 302 0 378 91 0 0 chr5 114994727 114994782 -84635368 + (CA)n Simple_repeat Simple_repeat 2 56 0 729 122 0 0 chr5 114995276 114995423 -84634727 + (TCCA)n Simple_repeat Simple_repeat 4 150 0 401 0 0 20 chr5 114995759 114995809 -84634341 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 243 309 82 0 chr5 114996087 114996184 -84633966 - FLAM_C SINE Alu -27 106 2 1139 84 0 6 chr5 114996529 114996695 -84633455 + (GAAA)n Simple_repeat Simple_repeat 2 166 0 288 77 0 0 chr5 114996864 114996903 -84633247 + (ATG)n Simple_repeat Simple_repeat 1 39 0 285 228 0 0 chr5 114997118 114997197 -84632953 + (ATG)n Simple_repeat Simple_repeat 2 80 0 519 95 0 0 chr5 114998707 114998781 -84631369 + (TG)n Simple_repeat Simple_repeat 2 75 0 689 41 0 69 chr5 114999002 114999147 -84631003 + (TTC)n Simple_repeat Simple_repeat 1 135 0 31 26 0 0 chr5 114999299 114999337 -84630813 + AT_rich Low_complexity Low_complexity 1 38 0 24 32 0 0 chr5 115001282 115001313 -84628837 + AT_rich Low_complexity Low_complexity 1 31 0 216 0 0 0 chr5 115002874 115002898 -84627252 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 201 243 0 0 chr5 115003757 115003827 -84626323 + (CA)n Simple_repeat Simple_repeat 1 70 0 261 57 0 0 chr5 115004230 115004265 -84625885 + (GA)n Simple_repeat Simple_repeat 2 36 0 232 258 15 15 chr5 115004855 115004921 -84625229 - tRNA-Ala-GCG tRNA tRNA -7 68 3 233 244 12 70 chr5 115006440 115006526 -84623624 - MSTD LTR MaLR 0 396 316 431 262 48 0 chr5 115007832 115007958 -84622192 - MLT1D LTR MaLR -362 143 12 423 0 0 0 chr5 115008400 115008447 -84621703 + (CA)n Simple_repeat Simple_repeat 1 47 0 21 36 0 0 chr5 115009056 115009084 -84621066 + AT_rich Low_complexity Low_complexity 1 28 0 230 216 20 0 chr5 115009276 115009327 -84620823 + PMER1 DNA MER1_type 1 52 -38 633 27 0 0 chr5 115010523 115010598 -84619552 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 233 237 0 17 chr5 115010740 115010799 -84619351 + tRNA-Lys-AAA tRNA tRNA 6 63 -13 24 32 0 0 chr5 115010885 115010916 -84619234 + AT_rich Low_complexity Low_complexity 1 31 0 230 160 40 0 chr5 115011253 115011303 -84618847 + Alu SINE Alu 2 53 -247 303 28 0 0 chr5 115012204 115012240 -84617910 + (GA)n Simple_repeat Simple_repeat 2 37 0 198 71 0 0 chr5 115012836 115012864 -84617286 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 257 239 38 42 chr5 115012911 115013007 -84617143 - AluSg SINE Alu -197 103 12 225 224 0 0 chr5 115015688 115015746 -84614404 + CT-rich Low_complexity Low_complexity 2 59 0 356 59 20 0 chr5 115016120 115016171 -84613979 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 493 158 139 0 chr5 115017521 115017622 -84612528 - AluSq/x SINE Alu -198 115 1 371 250 67 17 chr5 115017681 115017801 -84612349 - MER3 DNA MER1_type -14 195 70 186 128 0 0 chr5 115020123 115020162 -84609988 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 256 203 0 17 chr5 115020271 115020330 -84609820 - tRNA-Lys-AAA tRNA tRNA -13 63 6 25 51 0 0 chr5 115020343 115020382 -84609768 + AT_rich Low_complexity Low_complexity 1 39 0 33 25 0 0 chr5 115020547 115020587 -84609563 + AT_rich Low_complexity Low_complexity 1 40 0 193 206 29 0 chr5 115023079 115023113 -84607037 + MIR SINE MIR 208 242 -20 193 367 17 0 chr5 115023113 115023139 -84607011 + L2 LINE L2 3253 3313 0 209 250 13 0 chr5 115023139 115023215 -84606935 + (TGGA)n Simple_repeat Simple_repeat 2 78 0 344 22 0 22 chr5 115023269 115023315 -84606835 + (TG)n Simple_repeat Simple_repeat 2 46 0 221 339 0 0 chr5 115024135 115024200 -84605950 + (TG)n Simple_repeat Simple_repeat 2 66 0 215 274 65 48 chr5 115025667 115025791 -84604359 - MIR3 SINE MIR -80 128 3 283 243 154 29 chr5 115026448 115026584 -84603566 + AluJb SINE Alu 138 290 -12 228 368 24 24 chr5 115026719 115026844 -84603306 + MIR SINE MIR 22 146 -62 399 360 0 0 chr5 115029552 115029730 -84600420 + (TG)n Simple_repeat Simple_repeat 1 178 0 321 125 0 0 chr5 115030067 115030115 -84600035 + PMER1 DNA MER1_type 6 53 -37 306 0 0 0 chr5 115030559 115030593 -84599557 + (CA)n Simple_repeat Simple_repeat 2 35 0 237 313 0 0 chr5 115030836 115030900 -84599250 - tRNA-Ala-GCG tRNA tRNA -11 64 1 205 317 19 48 chr5 115030905 115031009 -84599141 - MIR SINE MIR -67 141 41 187 209 244 61 chr5 115031104 115031219 -84598931 - MIR SINE MIR -44 218 83 663 161 0 0 chr5 115032409 115032527 -84597623 + (TG)n Simple_repeat Simple_repeat 1 118 0 252 212 0 0 chr5 115032567 115032633 -84597517 + (TG)n Simple_repeat Simple_repeat 1 66 0 278 222 73 29 chr5 115034431 115034545 -84595605 + AluSq/x SINE Alu 9 105 -198 363 279 106 0 chr5 115034705 115034809 -84595341 + FLAM_C SINE Alu 2 116 -17 266 140 60 0 chr5 115035695 115035745 -84594405 - FLAM SINE Alu -6 127 75 182 244 200 11 chr5 115036000 115036090 -84594060 + MIR SINE MIR 30 136 -72 247 241 0 0 chr5 115038500 115038554 -84591596 + tRNA-Ala-GCG tRNA tRNA 1 54 -21 604 147 127 47 chr5 115038582 115038732 -84591418 - FRAM SINE Alu -14 162 1 300 111 0 0 chr5 115038781 115038826 -84591324 + (CAG)n Simple_repeat Simple_repeat 1 45 0 249 278 128 8 chr5 115038951 115039084 -84591066 - FRAM SINE Alu -10 156 8 231 36 0 0 chr5 115039306 115039334 -84590816 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 250 250 33 33 chr5 115039446 115039538 -84590612 + MIR SINE MIR 80 171 -91 432 0 0 0 chr5 115040921 115040969 -84589181 + (CA)n Simple_repeat Simple_repeat 2 49 0 207 204 0 37 chr5 115042294 115042348 -84587802 - MIR SINE MIR -100 162 111 267 238 16 0 chr5 115042777 115042840 -84587310 - MERVL LTR ERVL -968 4517 4454 461 71 64 36 chr5 115044497 115044637 -84585513 + (GTGTG)n Simple_repeat Simple_repeat 3 146 0 783 66 0 0 chr5 115048143 115048249 -84581901 + (CA)n Simple_repeat Simple_repeat 2 107 0 603 206 0 0 chr5 115049098 115049273 -84580877 + (TG)n Simple_repeat Simple_repeat 2 176 0 225 208 0 0 chr5 115049292 115049369 -84580781 + (TG)n Simple_repeat Simple_repeat 2 78 0 304 247 135 24 chr5 115049378 115049548 -84580602 + Tigger3(Golem) DNA MER2_type 146 334 -2695 631 152 5 38 chr5 115049667 115049851 -84580299 + (TG)n Simple_repeat Simple_repeat 1 178 0 252 0 0 0 chr5 115049917 115049945 -84580205 + (TG)n Simple_repeat Simple_repeat 1 28 0 470 17 17 0 chr5 115050186 115050245 -84579905 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 357 253 0 0 chr5 115050683 115050758 -84579392 + MIR SINE MIR 71 145 -117 306 125 0 0 chr5 115050798 115050846 -84579304 + (A)n Simple_repeat Simple_repeat 1 48 0 900 141 0 0 chr5 115051512 115051661 -84578489 + (TTCC)n Simple_repeat Simple_repeat 1 149 0 609 52 0 0 chr5 115051839 115051916 -84578234 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 285 29 0 0 chr5 115052545 115052579 -84577571 + (CA)n Simple_repeat Simple_repeat 2 35 0 231 250 0 48 chr5 115052634 115052718 -84577432 + MLT2C1 LTR ERVL 300 379 -18 334 207 92 11 chr5 115053587 115053674 -84576476 + AluS SINE Alu 2 95 -208 630 49 0 0 chr5 115053726 115053808 -84576342 + (CAAAC)n Simple_repeat Simple_repeat 2 83 0 243 0 0 0 chr5 115054831 115054858 -84575292 + (TG)n Simple_repeat Simple_repeat 1 27 0 * 312 27 0 0 chr5 115054857 115054894 -84575256 + (GA)n Simple_repeat Simple_repeat 1 37 0 25 31 0 0 chr5 115055652 115055684 -84574466 + AT_rich Low_complexity Low_complexity 1 32 0 213 319 25 17 chr5 115058665 115058784 -84571366 + (CATATA)n Simple_repeat Simple_repeat 3 122 0 202 319 14 0 chr5 115059101 115059170 -84570980 + (TG)n Simple_repeat Simple_repeat 1 70 0 456 111 0 0 chr5 115059441 115059513 -84570637 + (CA)n Simple_repeat Simple_repeat 1 72 0 437 150 18 0 chr5 115059526 115059639 -84570511 + (CAGA)n Simple_repeat Simple_repeat 2 116 0 684 93 0 0 chr5 115059770 115059793 -84570357 + (TTTC)n Simple_repeat Simple_repeat 1 120 0 684 93 0 0 chr5 115059793 115059890 -84570260 + (TTTC)n Simple_repeat Simple_repeat 1 97 0 1229 88 0 11 chr5 115059914 115060096 -84570054 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 206 137 20 59 chr5 115060441 115060492 -84569658 + CT-rich Low_complexity Low_complexity 1 49 0 375 41 0 0 chr5 115060998 115061047 -84569103 + (TG)n Simple_repeat Simple_repeat 2 50 0 218 303 0 40 chr5 115061289 115061365 -84568785 + CT-rich Low_complexity Low_complexity 6 78 0 22 35 0 0 chr5 115061366 115061395 -84568755 + AT_rich Low_complexity Low_complexity 1 29 0 1100 87 0 22 chr5 115061742 115061926 -84568224 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 755 121 0 8 chr5 115064168 115064300 -84565850 + (GTTTG)n Simple_repeat Simple_repeat 5 135 0 245 120 80 0 chr5 115064376 115064426 -84565724 - AluSp SINE Alu -106 197 144 332 289 96 19 chr5 115064514 115064670 -84565480 - FRAM SINE Alu -2 164 1 234 314 0 0 chr5 115064670 115064740 -84565410 - tRNA-Ala-GCG tRNA tRNA -5 70 1 422 284 40 45 chr5 115065724 115065900 -84564250 + MER5B DNA MER1_type 2 176 -2 417 70 0 0 chr5 115066382 115066439 -84563711 + (CA)n Simple_repeat Simple_repeat 1 57 0 261 83 0 0 chr5 115068748 115068784 -84561366 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 302 212 142 0 chr5 115068847 115068960 -84561190 + Tigger7 DNA MER2_type 2281 2409 -82 216 0 0 0 chr5 115068963 115068987 -84561163 + (TG)n Simple_repeat Simple_repeat 1 24 0 300 102 0 0 chr5 115070935 115070984 -84559166 + (TG)n Simple_repeat Simple_repeat 2 50 0 510 208 0 0 chr5 115072166 115072425 -84557725 + (CA)n Simple_repeat Simple_repeat 1 259 0 251 280 97 0 chr5 115073051 115073144 -84557006 - AluSq/x SINE Alu -200 103 2 24 53 0 0 chr5 115074486 115074524 -84555626 + AT_rich Low_complexity Low_complexity 1 38 0 40 0 0 0 chr5 115075118 115075158 -84554992 + AT_rich Low_complexity Low_complexity 1 40 0 194 133 0 44 chr5 115075158 115075203 -84554947 + (CGTG)n Simple_repeat Simple_repeat 4 46 0 379 191 64 0 chr5 115076819 115076913 -84553237 + MSTB LTR MaLR 326 425 -1 309 109 0 0 chr5 115076924 115076970 -84553180 + (GA)n Simple_repeat Simple_repeat 2 47 0 340 290 52 91 chr5 115077689 115077975 -84552175 + L1M4 LINE L1 4367 4641 -1505 280 318 18 0 chr5 115078164 115078274 -84551876 - MER74A LTR ERVL -267 291 180 254 286 24 12 chr5 115079175 115079259 -84550891 + HsTC2 DNA Tc2 1 85 -1813 21 0 0 0 chr5 115079313 115079334 -84550816 + AT_rich Low_complexity Low_complexity 1 21 0 189 229 0 0 chr5 115079347 115079395 -84550755 + (TG)n Simple_repeat Simple_repeat 1 48 0 229 232 174 0 chr5 115079634 115079703 -84550447 + AluY SINE Alu 9 89 -219 537 226 92 18 chr5 115080028 115080192 -84549958 - FRAM SINE Alu -2 174 1 222 150 0 0 chr5 115080497 115080537 -84549613 + (GGA)n Simple_repeat Simple_repeat 1 40 0 230 170 19 0 chr5 115080579 115080632 -84549518 + L1M4 LINE L1 78 131 -6411 344 238 154 49 chr5 115081506 115081649 -84548501 - HAL1 LINE L1 -1312 1195 1038 531 167 0 0 chr5 115082404 115082518 -84547632 + (TG)n Simple_repeat Simple_repeat 1 114 0 493 340 52 4 chr5 115082787 115083037 -84547113 + MER20B DNA MER1_type 178 439 -344 233 202 17 155 chr5 115083733 115083867 -84546283 - FLAM_A SINE Alu -6 127 31 250 197 16 33 chr5 115084555 115084616 -84545534 + AluSg/x SINE Alu 131 190 -112 295 0 0 161 chr5 115084618 115084773 -84545377 + (CAGAG)n Simple_repeat Simple_repeat 5 134 0 * 352 176 0 0 chr5 115084701 115084775 -84545375 + GA-rich Low_complexity Low_complexity 1 74 0 213 39 0 0 chr5 115084857 115084883 -84545267 + (CAA)n Simple_repeat Simple_repeat 2 27 0 238 267 84 53 chr5 115085141 115085272 -84544878 - Tigger5 DNA MER2_type -54 2269 2135 237 279 105 12 chr5 115085349 115085435 -84544715 - AluY SINE Alu -207 94 1 186 43 0 0 chr5 115086234 115086257 -84543893 + (TTG)n Simple_repeat Simple_repeat 1 23 0 24 32 0 0 chr5 115087966 115087997 -84542153 + AT_rich Low_complexity Low_complexity 1 31 0 289 130 0 42 chr5 115089071 115089132 -84541018 - MER4D LTR ERV1 -37 862 687 755 296 46 11 chr5 115092178 115092462 -84537688 - MER21B LTR ERV1 -111 752 459 25 31 0 0 chr5 115092488 115092520 -84537630 + AT_rich Low_complexity Low_complexity 1 32 0 249 217 70 104 chr5 115092879 115092994 -84537156 - FLAM_C SINE Alu -1 132 22 37 16 0 48 chr5 115096158 115096221 -84533929 + AT_rich Low_complexity Low_complexity 1 60 0 246 160 0 0 chr5 115097085 115097135 -84533015 + (TG)n Simple_repeat Simple_repeat 1 50 0 515 210 93 25 chr5 115099117 115099279 -84530871 - FRAM SINE Alu -4 172 1 315 0 0 0 chr5 115099945 115099980 -84530170 + (TG)n Simple_repeat Simple_repeat 1 35 0 714 133 0 0 chr5 115100356 115100506 -84529644 + (CAGG)n Simple_repeat Simple_repeat 2 151 0 423 14 99 43 chr5 115100862 115101003 -84529147 + (TGG)n Simple_repeat Simple_repeat 3 151 0 252 215 0 31 chr5 115101354 115101419 -84528731 - MLT2A2 LTR ERVL 0 453 397 186 117 0 50 chr5 115101422 115101482 -84528668 + (TA)n Simple_repeat Simple_repeat 1 57 0 180 322 0 0 chr5 115104368 115104427 -84525723 + MIR SINE MIR 63 121 -141 221 278 0 0 chr5 115107100 115107154 -84522996 + G-rich Low_complexity Low_complexity 1 54 0 248 159 0 16 chr5 115109634 115109697 -84520453 + (TA)n Simple_repeat Simple_repeat 2 63 0 195 236 28 42 chr5 115110505 115110577 -84519573 - MIR SINE MIR -122 140 70 206 247 41 14 chr5 115111282 115111355 -84518795 + (CATA)n Simple_repeat Simple_repeat 3 77 0 257 280 108 11 chr5 115111417 115111510 -84518640 - AluY SINE Alu -198 103 2 183 190 0 0 chr5 115113380 115113438 -84516712 + (TGG)n Simple_repeat Simple_repeat 2 59 0 291 167 0 141 chr5 115114176 115114254 -84515896 - PMER1 DNA MER1_type -15 75 9 303 309 39 17 chr5 115114359 115114540 -84515610 + Charlie5 DNA MER1_type 2368 2552 -60 421 246 0 11 chr5 115114698 115115065 -84515085 + (CA)n Simple_repeat Simple_repeat 1 362 0 393 86 0 0 chr5 115115417 115115475 -84514675 + (TG)n Simple_repeat Simple_repeat 2 59 0 198 103 0 0 chr5 115116109 115116138 -84514012 + (CAT)n Simple_repeat Simple_repeat 1 29 0 749 93 31 0 chr5 115116144 115116273 -84513877 + CT-rich Low_complexity Low_complexity 2 134 0 755 118 0 7 chr5 115116990 115117126 -84513024 + (TG)n Simple_repeat Simple_repeat 2 136 0 303 313 0 0 chr5 115118648 115118747 -84511403 + GA-rich Low_complexity Low_complexity 2 100 0 233 127 0 79 chr5 115119247 115119310 -84510840 + (TTTTTG)n Simple_repeat Simple_repeat 3 60 0 2342 278 14 16 chr5 115119973 115121259 -84508891 - L1MA4A LINE L1 -373 5930 4645 277 164 27 14 chr5 115121439 115121512 -84508638 + GA-rich Low_complexity Low_complexity 3 76 0 185 351 26 0 chr5 115122753 115122830 -84507320 + MIR SINE MIR 68 146 -62 207 0 0 0 chr5 115124220 115124243 -84505907 + (CA)n Simple_repeat Simple_repeat 2 24 0 378 0 0 0 chr5 115127112 115127154 -84502996 + (TG)n Simple_repeat Simple_repeat 2 43 0 235 322 111 0 chr5 115127496 115127586 -84502564 + AluSg SINE Alu 4 103 -197 200 191 0 24 chr5 115128337 115128379 -84501771 + CT-rich Low_complexity Low_complexity 4 44 0 387 195 99 9 chr5 115128504 115128658 -84501492 + AluSg SINE Alu 5 103 -197 183 250 0 0 chr5 115129483 115129535 -84500615 + (CA)n Simple_repeat Simple_repeat 1 52 0 540 0 0 0 chr5 115131184 115131244 -84498906 + (TC)n Simple_repeat Simple_repeat 1 60 0 260 115 49 0 chr5 115131363 115131424 -84498726 + T-rich Low_complexity Low_complexity 2 65 0 406 171 138 72 chr5 115131436 115131588 -84498562 - AluSg SINE Alu -197 103 6 324 209 0 0 chr5 115132102 115132193 -84497957 + (TG)n Simple_repeat Simple_repeat 2 92 0 288 0 0 0 chr5 115133647 115133679 -84496471 + (ATTG)n Simple_repeat Simple_repeat 4 35 0 303 28 0 0 chr5 115134594 115134630 -84495520 + (TG)n Simple_repeat Simple_repeat 2 37 0 417 20 0 0 chr5 115135201 115135251 -84494899 + (TG)n Simple_repeat Simple_repeat 2 51 0 205 290 0 16 chr5 115135550 115135612 -84494538 + G-rich Low_complexity Low_complexity 1 61 0 408 111 0 0 chr5 115136774 115136837 -84493313 + (TG)n Simple_repeat Simple_repeat 2 64 0 228 246 72 0 chr5 115136959 115137028 -84493122 - AluSp SINE Alu -103 200 127 197 244 0 0 chr5 115142664 115142709 -84487441 - L2 LINE L2 -6 3266 3222 263 288 32 49 chr5 115144358 115144481 -84485669 + AluSp SINE Alu 123 197 -106 1071 84 0 0 chr5 115146333 115146579 -84483571 + (TG)n Simple_repeat Simple_repeat 1 246 0 364 288 8 17 chr5 115147759 115147877 -84482273 + Tigger5 DNA MER2_type 3 119 -2204 272 253 38 0 chr5 115148490 115148569 -84481581 + (TATG)n Simple_repeat Simple_repeat 1 82 0 279 203 62 0 chr5 115148672 115148736 -84481414 - AluSg/x SINE Alu -110 192 125 242 275 132 0 chr5 115148965 115149056 -84481094 - AluSc SINE Alu -179 120 18 448 269 0 0 chr5 115149453 115149561 -84480589 + HERVL LTR ERVL 204 311 -5343 207 0 0 0 chr5 115149670 115149693 -84480457 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 275 248 118 65 chr5 115149693 115149838 -84480312 - FRAM SINE Alu -149 153 1 249 143 0 57 chr5 115149984 115150054 -84480096 + (GGGA)n Simple_repeat Simple_repeat 1 66 0 306 224 0 15 chr5 115150174 115150241 -84479909 - L2 LINE L2 -6 3307 3242 261 0 0 0 chr5 115151365 115151394 -84478756 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 302 250 26 0 chr5 115155801 115155877 -84474273 - MSTC LTR MaLR -336 92 15 457 282 38 38 chr5 115156719 115156932 -84473218 - L1MB7 LINE L1 -77 6107 5895 436 324 130 14 chr5 115157091 115157401 -84472749 - L1MB7 LINE L1 -318 5860 5514 236 314 144 33 chr5 115157683 115157836 -84472314 + FRAM SINE Alu 1 166 0 1602 122 17 0 chr5 115258225 115258455 -84371695 + AluSg/x SINE Alu 67 300 -12 461 195 161 8 chr5 115258567 115258685 -84371465 + AluJo SINE Alu 1 136 -176 207 0 0 0 chr5 115258685 115258708 -84371442 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 408 324 135 20 chr5 115258874 115259118 -84371032 + L3 LINE CR1 968 1239 -338 21 0 0 0 chr5 115259394 115259415 -84370735 + AT_rich Low_complexity Low_complexity 1 21 0 565 330 95 23 chr5 115259938 115260326 -84369824 + L2 LINE L2 2895 3310 -3 571 192 10 10 chr5 115261992 115262096 -84368054 - FRAM SINE Alu -78 98 1 221 159 0 0 chr5 115262096 115262140 -84368010 + A-rich Low_complexity Low_complexity 1 44 0 619 167 0 42 chr5 115262148 115262268 -84367882 - FLAM_C SINE Alu -28 115 1 368 278 28 19 chr5 115262379 115262487 -84367663 - MER81 DNA DNA -5 109 1 308 344 172 6 chr5 115262544 115262724 -84367426 - L2 LINE L2 -33 3239 3030 198 325 74 43 chr5 115262970 115263133 -84367017 - L2 LINE L2 -534 2780 2613 252 189 284 0 chr5 115265990 115266064 -84364086 + L2 LINE L2 3214 3308 -5 61 52 0 0 chr5 115266113 115266209 -84363941 + AT_rich Low_complexity Low_complexity 1 96 0 2325 135 11 6 chr5 115266253 115266615 -84363535 + THE1B LTR MaLR 1 364 0 3659 120 111 0 chr5 115266615 115267200 -84362950 + THE1B-int LTR MaLR 1 650 -930 415 315 57 43 chr5 115267229 115267597 -84362553 + L1M4 LINE L1 3111 3483 -2663 709 266 68 32 chr5 115267980 115268232 -84361918 + MIR SINE MIR 1 261 -1 307 361 8 0 chr5 115268781 115268903 -84361247 - MER94 DNA DNA -5 129 7 23 33 0 0 chr5 115270689 115270719 -84359431 + AT_rich Low_complexity Low_complexity 1 30 0 784 241 105 21 chr5 115271552 115271832 -84358318 + MLT1H LTR MaLR 217 604 -22 180 234 0 0 chr5 115272028 115272075 -84358075 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 293 220 30 191 chr5 115272075 115272243 -84357907 - MIR SINE MIR -109 153 13 405 263 53 38 chr5 115272682 115272891 -84357259 - L1ME LINE L1 -700 5466 5255 427 183 29 29 chr5 115272912 115273016 -84357134 - L1MC3 LINE L1 -817 6968 6865 310 304 10 0 chr5 115273014 115273116 -84357034 - L1ME LINE L1 -413 6151 6049 * 248 173 53 40 chr5 115273116 115273191 -84356959 + MER116 DNA Mariner 4 79 -1 797 286 95 23 chr5 115273194 115273306 -84356844 - L1ME LINE L1 -509 6047 5945 2074 199 42 9 chr5 115273306 115273758 -84356392 + MLT1C LTR MaLR 1 467 0 797 286 95 23 chr5 115273758 115274327 -84355823 - L1ME LINE L1 -611 5945 5311 2481 280 55 42 chr5 115274354 115275167 -84354983 + L1PA13 LINE L1 5 828 -5959 * 12238 236 62 40 chr5 115275145 115275592 -84354558 + L1PA13 LINE L1 1269 1705 -5092 2242 176 42 5 chr5 115275592 115276001 -84354149 + MSTA LTR MaLR 1 424 -4 12238 236 62 40 chr5 115276001 115276784 -84353366 + L1PA13 LINE L1 1705 2469 -4328 1474 211 7 3 chr5 115276784 115277073 -84353077 + AluSx SINE Alu 21 310 -2 12238 236 62 40 chr5 115277073 115278939 -84351211 + L1PA13 LINE L1 2469 4511 -2286 3444 71 0 13 chr5 115278939 115279389 -84350761 - MLT2A1 LTR ERVL 0 444 1 12238 236 62 40 chr5 115279389 115280648 -84349502 + L1PA13 LINE L1 4511 5741 -1056 507 256 108 31 chr5 115280791 115281049 -84349101 - L1ME LINE L1 -3736 2804 2527 388 285 83 54 chr5 115281116 115281393 -84348757 - L1ME LINE L1 -4237 2484 2200 338 314 84 34 chr5 115281395 115281925 -84348225 - L1MDa LINE L1 -4614 2107 1515 2002 111 4 7 chr5 115281929 115282246 -84347904 + AluSg SINE Alu 3 318 0 568 248 52 33 chr5 115282330 115282540 -84347610 - MER58C DNA MER1_type -1 214 1 461 221 27 86 chr5 115282579 115282801 -84347349 - L1MEc LINE L1 -1485 4730 4522 22 0 0 0 chr5 115282814 115282836 -84347314 + AT_rich Low_complexity Low_complexity 1 22 0 722 282 145 30 chr5 115283000 115283818 -84346332 - L1MEc LINE L1 -1978 4237 3224 1576 205 30 0 chr5 115283818 115284116 -84346034 - AluJo SINE Alu -5 307 1 722 282 145 30 chr5 115284116 115284545 -84345605 - L1MEc LINE L1 -2991 3224 2846 294 242 121 47 chr5 115284554 115284769 -84345381 - L1MEc LINE L1 -3773 2442 2212 30 27 0 0 chr5 115284987 115285024 -84345126 + AT_rich Low_complexity Low_complexity 1 37 0 69 24 0 0 chr5 115285043 115285126 -84345024 + AT_rich Low_complexity Low_complexity 1 83 0 216 286 0 0 chr5 115285162 115285225 -84344925 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 365 307 37 56 chr5 115285259 115285420 -84344730 - L1MEc LINE L1 -4586 1810 1652 2227 126 0 0 chr5 115285420 115285730 -84344420 - AluSx SINE Alu -2 310 1 365 307 37 56 chr5 115285730 115285783 -84344367 - L1MEc LINE L1 -4744 1652 1600 27 29 0 0 chr5 115286317 115286351 -84343799 + AT_rich Low_complexity Low_complexity 1 34 0 192 152 0 0 chr5 115286456 115286489 -84343661 + T-rich Low_complexity Low_complexity 1 33 0 197 202 0 193 chr5 115288026 115288145 -84342005 - MIR SINE MIR 0 262 167 577 290 52 16 chr5 115288299 115288492 -84341658 - MIR SINE MIR -6 256 57 248 325 13 0 chr5 115288555 115288632 -84341518 - MER5A DNA MER1_type -103 86 9 2127 100 1 36 chr5 115290295 115290786 -84339364 - MER51A LTR ERV1 0 634 1 2062 156 3 6 chr5 115290787 115291113 -84339037 - MER51A-int LTR ERV1 0 7816 7492 260 307 75 40 chr5 115291277 115291505 -84338645 - MER51-int LTR ERV1 -1810 4866 4631 1107 327 35 39 chr5 115291585 115292227 -84337923 - MER51-int LTR ERV1 -1951 5805 5279 1466 311 55 51 chr5 115292442 115294158 -84335992 - MER51-int LTR ERV1 -1086 3868 2897 258 174 0 174 chr5 115294658 115294744 -84335406 - MER51-int LTR ERV1 -4958 2027 1957 426 270 24 55 chr5 115295973 115296271 -84333879 - MER51-int LTR ERV1 -3907 973 874 289 121 35 17 chr5 115296539 115296597 -84333553 - MER51-int LTR ERV1 -2513 3433 3375 * 588 174 17 64 chr5 115296575 115296747 -84333403 - MER51-int LTR ERV1 -2394 2621 2458 2070 182 50 69 chr5 115296758 115297400 -84332750 - MER51-int LTR ERV1 -4379 571 42 1600 150 8 0 chr5 115297400 115297640 -84332510 - MER51A LTR ERV1 -392 242 1 249 188 16 0 chr5 115297865 115297929 -84332221 - L1MA8 LINE L1 -2 6289 6225 2579 86 131 0 chr5 115297934 115298330 -84331820 - LTR7 LTR ERV1 -2 448 1 2176 113 81 3 chr5 115298330 115298700 -84331450 - HERVH LTR ERV1 0 7713 7315 896 96 0 7 chr5 115298814 115298950 -84331200 - HERVH LTR ERV1 -1979 5734 5600 4153 159 3 1 chr5 115298951 115299612 -84330538 - HERVH LTR ERV1 -2564 5149 4488 3295 98 14 4 chr5 115299614 115300102 -84330048 - HERVH LTR ERV1 -3720 3993 3501 838 151 20 0 chr5 115300104 115300250 -84329900 - HERVH LTR ERV1 -4425 3288 3140 * 11086 97 9 8 chr5 115300244 115301849 -84328301 - HERVH LTR ERV1 -4726 2987 1382 2177 81 17 0 chr5 115301858 115302153 -84327997 - HERVH LTR ERV1 -7413 300 1 2566 78 134 2 chr5 115302155 115302551 -84327599 - LTR7 LTR ERV1 -2 448 1 3366 134 52 2 chr5 115302551 115303134 -84327016 - L1MA8 LINE L1 -65 6226 5615 2230 113 0 3 chr5 115303940 115304240 -84325910 + AluSx SINE Alu 1 299 -13 211 185 19 19 chr5 115305204 115305258 -84324892 + (TA)n Simple_repeat Simple_repeat 1 54 0 1753 259 57 40 chr5 115306363 115307115 -84323035 - L1MC4a LINE L1 -1741 6067 5303 225 0 0 0 chr5 115307435 115307460 -84322690 + (T)n Simple_repeat Simple_repeat 1 25 0 27 62 0 0 chr5 115307670 115307718 -84322432 + AT_rich Low_complexity Low_complexity 1 48 0 414 336 97 16 chr5 115307748 115308376 -84321774 - L1MC4a LINE L1 -1450 4696 4018 9955 218 48 67 chr5 115308426 115309196 -84320954 + L1 LINE L1 2225 3008 -3158 2141 110 7 0 chr5 115309196 115309495 -84320655 - AluSg SINE Alu -9 301 1 9955 218 48 67 chr5 115309495 115309511 -84320639 + L1 LINE L1 3008 3023 -3143 1308 220 20 27 chr5 115309511 115309807 -84320343 - AluJo SINE Alu -8 294 1 9955 218 48 67 chr5 115309807 115312281 -84317869 + L1 LINE L1 3023 5423 -743 648 223 81 71 chr5 115312307 115312553 -84317597 + MLT1H1 LTR MaLR 244 495 -60 2059 125 7 0 chr5 115312553 115312840 -84317310 - AluSp SINE Alu -24 289 1 648 223 81 71 chr5 115312840 115312902 -84317248 + MLT1H1 LTR MaLR 495 555 0 361 347 86 8 chr5 115312902 115313147 -84317003 - L1MC4a LINE L1 -2339 3807 3544 4582 171 11 53 chr5 115313159 115314109 -84316041 - L1MA4 LINE L1 -1 6299 5390 488 296 37 61 chr5 115314261 115314639 -84315511 - L1MC4a LINE L1 -2663 3483 3115 281 67 0 22 chr5 115315309 115315354 -84314796 + (GA)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr5 115316664 115316685 -84313465 + AT_rich Low_complexity Low_complexity 1 21 0 2194 71 0 0 chr5 115317240 115317521 -84312629 - AluY SINE Alu -30 281 1 265 333 46 26 chr5 115318295 115318448 -84311702 - MIR SINE MIR -87 175 20 263 267 0 0 chr5 115318870 115318930 -84311220 + MIR SINE MIR 81 140 -122 23 54 0 0 chr5 115319047 115319084 -84311066 + AT_rich Low_complexity Low_complexity 1 37 0 1904 201 18 76 chr5 115319504 115319564 -84310586 - L1M2 LINE L1 -617 5695 5633 452 133 0 36 chr5 115319564 115319647 -84310503 - MADE1 DNA Mariner 0 80 1 1904 201 18 76 chr5 115319647 115320213 -84309937 - L1M2 LINE L1 -679 5633 5117 252 325 25 0 chr5 115320985 115321065 -84309085 - L2 LINE L2 -5 3267 3186 275 310 130 59 chr5 115321185 115321624 -84308526 - L2 LINE L2 -1 3312 2843 459 219 107 12 chr5 115321751 115321920 -84308230 + MIR SINE MIR 78 262 0 6658 72 3 0 chr5 115322024 115322895 -84307255 - L1PA7 LINE L1 0 6154 5281 800 337 43 51 chr5 115322953 115323517 -84306633 - L2 LINE L2 -722 2592 2034 1602 169 10 24 chr5 115324035 115324330 -84305820 - AluJo SINE Alu -21 291 1 24 53 0 0 chr5 115324330 115324368 -84305782 + AT_rich Low_complexity Low_complexity 1 38 0 323 202 12 0 chr5 115324370 115324454 -84305696 + (TA)n Simple_repeat Simple_repeat 1 85 0 238 208 0 62 chr5 115324459 115324555 -84305595 - L1MC4 LINE L1 -1339 6703 6614 236 234 0 43 chr5 115324473 115324567 -84305583 + L1MC4 LINE L1 6614 6703 -1339 * 312 182 0 30 chr5 115324577 115324643 -84305507 + L1MC4 LINE L1 6640 6703 -1339 220 137 39 0 chr5 115325032 115325083 -84305067 + (TA)n Simple_repeat Simple_repeat 2 54 0 180 238 0 0 chr5 115326789 115326831 -84303319 - L3b LINE CR1 -183 1400 1359 208 116 58 43 chr5 115327184 115327253 -84302897 + A-rich Low_complexity Low_complexity 1 70 0 1964 136 10 19 chr5 115327674 115327984 -84302166 + AluSx SINE Alu 5 311 -1 273 282 31 104 chr5 115328224 115328387 -84301763 - MIR3 SINE MIR -29 179 29 1586 210 94 56 chr5 115328563 115329062 -84301088 + MLT2B1 LTR ERVL 1 518 -2 699 322 67 25 chr5 115329954 115330268 -84299882 + L2 LINE L2 2252 2578 -736 796 309 53 28 chr5 115330388 115330960 -84299190 - L2 LINE L2 -32 3281 2692 1364 221 101 33 chr5 115332801 115333160 -84296990 - L1MEc LINE L1 -3004 3211 2793 2279 104 10 0 chr5 115333160 115333469 -84296681 - AluSx SINE Alu 0 312 1 1364 221 101 33 chr5 115333469 115333716 -84296434 - L1MEc LINE L1 -3422 2793 2564 324 209 0 164 chr5 115333722 115333923 -84296227 - L1MEc LINE L1 -3745 2470 2303 290 163 8 21 chr5 115333923 115334182 -84295968 + AluJo SINE Alu 1 296 -6 324 261 73 40 chr5 115334247 115334519 -84295631 - L1MEc LINE L1 -4138 2258 1978 543 324 54 24 chr5 115334690 115334986 -84295164 - L1MEc LINE L1 -5719 486 182 459 240 78 116 chr5 115335690 115335932 -84294218 - MER102a DNA MER1_type 0 330 98 344 300 18 11 chr5 115336369 115336504 -84293646 - MIR3 SINE MIR -24 184 50 29 84 0 0 chr5 115337588 115337659 -84292491 + AT_rich Low_complexity Low_complexity 1 71 0 822 231 12 12 chr5 115338045 115338218 -84291932 + MER5B DNA MER1_type 6 178 0 36 0 0 0 chr5 115338332 115338368 -84291782 + AT_rich Low_complexity Low_complexity 1 36 0 865 278 53 43 chr5 115338596 115339228 -84290922 - L1ME3A LINE L1 -240 5930 5268 2904 51 54 3 chr5 115339301 115339692 -84290458 + L1PA7 LINE L1 5744 6154 0 405 324 62 32 chr5 115339828 115340267 -84289883 - L1ME3A LINE L1 -1182 4964 4513 26 30 0 0 chr5 115340276 115340309 -84289841 + AT_rich Low_complexity Low_complexity 1 33 0 429 267 39 58 chr5 115340416 115340622 -84289528 - L1MC5 LINE L1 -49 7912 7711 267 324 140 5 chr5 115340837 115341245 -84288905 - L1ME3A LINE L1 -2027 4119 3657 964 49 0 0 chr5 115341264 115341387 -84288763 - L1PA4 LINE L1 -3 6152 6030 357 305 79 26 chr5 115341608 115341798 -84288352 - L1ME3A LINE L1 -2846 3300 3101 930 224 60 9 chr5 115341819 115342051 -84288099 - L1MB7 LINE L1 -21 6399 6156 7280 234 68 24 chr5 115342051 115343285 -84286865 - L1MB7 LINE L1 -574 5840 4662 2092 108 11 0 chr5 115343285 115343646 -84286504 - AluSc SINE Alu 0 364 1 7280 234 68 24 chr5 115343646 115345201 -84284949 - L1MB7 LINE L1 -1752 4662 2923 * 9449 172 16 27 chr5 115345183 115348174 -84281976 + L1PB1 LINE L1 3200 6150 -1 334 248 72 24 chr5 115348174 115348299 -84281851 - L1MB7 LINE L1 -3447 2935 2805 * 1572 191 69 43 chr5 115348294 115349133 -84281017 - L1P5 LINE L1 -439 5948 2235 3977 159 26 22 chr5 115349152 115349723 -84280427 - L1PA16 LINE L1 0 6166 5590 2453 28 0 0 chr5 115349723 115350014 -84280136 - L1PA4 LINE L1 0 6155 5865 3977 159 26 22 chr5 115350014 115350170 -84279980 - L1PA16 LINE L1 -576 5590 5436 714 253 253 30 chr5 115350185 115350711 -84279439 - L1MB7 LINE L1 -4183 2201 1559 43 29 0 15 chr5 115350863 115350896 -84279254 + AT_rich Low_complexity Low_complexity 1 33 -34 2214 100 0 0 chr5 115350896 115351187 -84278963 - AluSq SINE Alu -22 291 1 43 29 0 15 chr5 115351187 115351221 -84278929 + AT_rich Low_complexity Low_complexity 33 67 0 21 0 0 0 chr5 115351452 115351473 -84278677 + AT_rich Low_complexity Low_complexity 1 21 0 838 244 135 14 chr5 115353837 115354186 -84275964 + L1ME3A LINE L1 5767 6157 -13 210 118 0 0 chr5 115354555 115354589 -84275561 + (A)n Simple_repeat Simple_repeat 1 34 0 1369 223 30 48 chr5 115356956 115357350 -84272800 - MLT1B LTR MaLR -3 387 1 1338 250 76 29 chr5 115357531 115358015 -84272135 - L1MEc LINE L1 -5769 627 121 216 0 0 0 chr5 115358017 115358041 -84272109 + (A)n Simple_repeat Simple_repeat 1 24 0 1121 260 126 39 chr5 115358244 115359056 -84271094 - L1MEc LINE L1 -1253 5287 4406 5997 161 29 58 chr5 115359198 115361479 -84268671 - L1MA6 LINE L1 0 7321 5119 916 188 13 13 chr5 115361471 115361695 -84268455 - L1MA6 LINE L1 -2733 4434 4211 * 9926 209 20 49 chr5 115361702 115364726 -84265424 - L1MA6 LINE L1 -4241 2927 3 259 320 14 5 chr5 115364740 115364959 -84265191 - L1MEc LINE L1 -2194 4346 4100 302 214 111 40 chr5 115365001 115365127 -84265023 - L1MEc LINE L1 -3112 3428 3294 434 280 26 50 chr5 115365141 115365363 -84264787 - L1MEc LINE L1 -4561 2020 1760 1348 201 24 73 chr5 115365402 115365799 -84264351 + MLT1C LTR MaLR 1 465 -2 182 37 37 0 chr5 115366561 115366588 -84263562 + (CA)n Simple_repeat Simple_repeat 1 28 0 1939 65 0 12 chr5 115366625 115366870 -84263280 + AluY SINE Alu 54 295 -16 21 36 0 0 chr5 115367440 115367468 -84262682 + AT_rich Low_complexity Low_complexity 1 28 0 298 299 47 47 chr5 115367522 115367629 -84262521 + L2 LINE L2 3191 3297 -16 285 295 54 0 chr5 115367689 115367818 -84262332 - L1ME LINE L1 -319 5802 5667 306 98 0 0 chr5 115368631 115368682 -84261468 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 731 285 86 73 chr5 115369361 115369978 -84260172 - L2 LINE L2 -174 3139 2302 13973 147 32 16 chr5 115369982 115370695 -84259455 - Tigger1 DNA MER2_type -1 2417 1717 1336 210 154 76 chr5 115370695 115371209 -84258941 - MLT2B3 LTR ERVL 0 554 1 13973 147 32 16 chr5 115371209 115372872 -84257278 - Tigger1 DNA MER2_type -701 1717 2 2759 239 65 23 chr5 115373013 115373161 -84256989 - L1MD3 LINE L1 0 8039 7899 249 33 0 0 chr5 115373161 115373191 -84256959 + (CA)n Simple_repeat Simple_repeat 2 31 0 2759 239 65 23 chr5 115373191 115373958 -84256192 - L1MD3 LINE L1 -140 7899 7102 21 57 0 0 chr5 115374724 115374759 -84255391 + AT_rich Low_complexity Low_complexity 1 35 0 200 222 0 0 chr5 115375194 115375239 -84254911 + A-rich Low_complexity Low_complexity 1 45 0 5560 229 76 87 chr5 115375735 115377805 -84252345 - L1ME1 LINE L1 -281 5885 3794 2395 71 0 3 chr5 115377805 115378102 -84252048 + AluY SINE Alu 1 296 -15 5560 229 76 87 chr5 115378102 115378973 -84251177 - L1ME1 LINE L1 -2372 3794 2848 849 171 0 7 chr5 115378973 115379119 -84251031 - FAM SINE Alu -13 172 28 5560 229 76 87 chr5 115379119 115379597 -84250553 - L1ME1 LINE L1 -3318 2848 2366 1943 125 0 14 chr5 115379893 115380193 -84249957 + AluSc SINE Alu 12 309 0 29 84 0 0 chr5 115381238 115381309 -84248841 + AT_rich Low_complexity Low_complexity 1 71 0 21 0 0 0 chr5 115381627 115381648 -84248502 + AT_rich Low_complexity Low_complexity 1 21 0 180 406 146 10 chr5 115382154 115382250 -84247900 - L2 LINE L2 -39 3233 3125 271 320 10 10 chr5 115382324 115382421 -84247729 - MLT1J2 LTR MaLR -8 442 346 1632 158 174 11 chr5 115383204 115383572 -84246578 - MSTA LTR MaLR 0 428 1 261 321 138 0 chr5 115383684 115383793 -84246357 + L2 LINE L2 3188 3311 -2 216 357 0 0 chr5 115383811 115383881 -84246269 - L2 LINE L2 -957 2357 2288 21 0 0 0 chr5 115384873 115384894 -84245256 + AT_rich Low_complexity Low_complexity 1 21 0 387 160 0 0 chr5 115386313 115386388 -84243762 + (TA)n Simple_repeat Simple_repeat 1 75 0 267 284 62 0 chr5 115387101 115387182 -84242968 + L2 LINE L2 2666 2751 -563 320 264 124 16 chr5 115387275 115387404 -84242746 + HAL1 LINE L1 587 729 -1778 1439 261 114 29 chr5 115387416 115387940 -84242210 + MLT1F1 LTR MaLR 1 567 0 489 223 23 80 chr5 115388045 115388220 -84241930 + L1MA10 LINE L1 6166 6330 -4 * 782 257 29 56 chr5 115388217 115388664 -84241486 + HAL1 LINE L1 826 1260 -1247 320 180 0 0 chr5 115388781 115388842 -84241308 - MLT1E LTR MaLR 0 567 507 15789 167 47 10 chr5 115388847 115391662 -84238488 + L1M1 LINE L1 17 2937 -4628 606 285 120 48 chr5 115391687 115392020 -84238130 - MLT1E LTR MaLR -233 360 4 828 241 74 0 chr5 115392158 115392361 -84237789 + MER20 DNA MER1_type 2 219 0 262 280 80 96 chr5 115392369 115392608 -84237542 + MLT1I LTR MaLR 107 341 -68 296 243 48 19 chr5 115392675 115392778 -84237372 + HAL1 LINE L1 1486 1591 -916 577 238 82 126 chr5 115392931 115393225 -84236925 + HAL1 LINE L1 1606 1886 -621 28 61 0 0 chr5 115396085 115396134 -84234016 + AT_rich Low_complexity Low_complexity 1 49 0 304 164 14 55 chr5 115396143 115396216 -84233934 - L1PA16 LINE L1 -2 6164 6095 * 6273 150 26 3 chr5 115396212 115398145 -84232005 + L1MA2 LINE L1 4327 6304 0 5107 214 35 173 chr5 115398224 115401386 -84228764 - L1P LINE L1 -1823 4323 1600 360 273 41 8 chr5 115401485 115401606 -84228544 - L1ME LINE L1 -367 5803 5679 294 276 69 36 chr5 115401587 115401891 -84228259 - L1MEd LINE L1 -5015 1104 791 * 276 218 0 0 chr5 115403418 115403473 -84226677 + L1MC3 LINE L1 6716 6770 -1015 1208 212 24 135 chr5 115404589 115404724 -84225426 + MLT1C LTR MaLR 15 163 -304 1777 166 98 78 chr5 115404724 115405224 -84224926 - MER67D LTR ERV1 0 514 5 1208 212 24 135 chr5 115405224 115405279 -84224871 + MLT1C LTR MaLR 163 223 -244 2215 124 25 0 chr5 115405279 115405635 -84224515 + L1MA2 LINE L1 5940 6304 0 1208 212 24 135 chr5 115405635 115405953 -84224197 + MLT1C LTR MaLR 223 467 0 367 340 122 21 chr5 115406153 115406341 -84223809 - MIR SINE MIR -51 211 5 484 354 53 59 chr5 115407059 115407869 -84222281 - L2 LINE L2 0 3272 2471 399 89 0 0 chr5 115409653 115409709 -84220441 + (CA)n Simple_repeat Simple_repeat 1 56 0 22 0 0 0 chr5 115410005 115410027 -84220123 + AT_rich Low_complexity Low_complexity 1 22 0 2414 43 0 23 chr5 115410934 115411238 -84218912 - AluY SINE Alu -1 310 14 25 0 0 0 chr5 115412045 115412070 -84218080 + AT_rich Low_complexity Low_complexity 1 25 0 323 197 15 0 chr5 115413781 115413847 -84216303 - Charlie8 DNA MER1_type 0 2417 2351 664 272 106 22 chr5 115414589 115414909 -84215241 - HAL1 LINE L1 -2119 388 42 21 36 0 0 chr5 115414991 115415019 -84215131 + AT_rich Low_complexity Low_complexity 1 28 0 326 373 24 8 chr5 115415076 115415202 -84214948 + MIR SINE MIR 23 150 -112 665 323 129 0 chr5 115415217 115415527 -84214623 - LTR50 LTR ERVL -2 793 444 315 209 0 0 chr5 115415668 115415735 -84214415 - LTR50 LTR ERVL -723 72 6 255 61 0 0 chr5 115415844 115415877 -84214273 + (A)n Simple_repeat Simple_repeat 1 33 0 2288 81 3 3 chr5 115417996 115418292 -84211858 + AluY SINE Alu 1 296 -15 307 271 49 60 chr5 115419094 115419415 -84210735 - L2 LINE L2 -2 3311 2936 357 324 14 29 chr5 115419424 115419631 -84210519 + MLT1I LTR MaLR 5 208 -201 283 235 49 12 chr5 115419720 115419801 -84210349 + MLT1I LTR MaLR 318 401 -8 226 371 26 0 chr5 115419808 115419924 -84210226 - L2 LINE L2 -390 2924 2806 2195 144 41 35 chr5 115419943 115420483 -84209667 - MLT2A2 LTR ERVL -7 547 1 27 29 0 0 chr5 115420587 115420621 -84209529 + AT_rich Low_complexity Low_complexity 1 34 0 2429 146 66 0 chr5 115421580 115422033 -84208117 + L1MB2 LINE L1 5687 6169 -2 669 293 47 12 chr5 115422580 115422833 -84207317 + MIR SINE MIR 1 262 0 1150 318 46 26 chr5 115423109 115423692 -84206458 - MER115 DNA AcHobo -3 690 1 1893 240 39 11 chr5 115423961 115424423 -84205727 + HsTC2 DNA Tc2 2 476 -1422 3998 194 60 102 chr5 115424690 115424877 -84205273 - L1 LINE L1 -2786 4779 4586 1969 146 7 0 chr5 115424877 115425165 -84204985 - AluSx SINE Alu -14 298 9 3998 194 60 102 chr5 115425165 115427001 -84203149 - L1 LINE L1 -2979 4586 2843 954 173 45 0 chr5 115426995 115427174 -84202976 + L1M1 LINE L1 5607 5793 -510 * 378 91 0 0 chr5 115427176 115427231 -84202919 + (TG)n Simple_repeat Simple_repeat 2 56 0 364 276 24 8 chr5 115427231 115427358 -84202792 - L1ME LINE L1 -544 5689 5561 830 307 53 37 chr5 115427368 115428126 -84202024 - L1ME LINE L1 -4838 1558 789 22 35 0 0 chr5 115428126 115428155 -84201995 + AT_rich Low_complexity Low_complexity 1 29 0 305 241 43 0 chr5 115428879 115428986 -84201164 + MER69 DNA AcHobo 2408 2523 -3 233 179 0 45 chr5 115430431 115430498 -84199652 + T-rich Low_complexity Low_complexity 5 68 0 336 271 16 31 chr5 115430873 115431002 -84199148 + LTR67 LTR ERVL 429 555 -2 670 248 93 91 chr5 115431348 115431787 -84198363 - Charlie8 DNA MER1_type -1947 470 31 239 408 54 0 chr5 115433174 115433304 -84196846 - MIR SINE MIR -122 140 4 399 299 58 22 chr5 115434362 115434586 -84195564 - LTR67 LTR ERVL 0 557 326 806 276 153 43 chr5 115437018 115437128 -84193022 - MLT1J LTR MaLR -5 506 409 1786 151 66 36 chr5 115437128 115437492 -84192658 + THE1C LTR MaLR 1 375 0 806 276 153 43 chr5 115437492 115437773 -84192377 - MLT1J LTR MaLR -102 409 72 310 278 102 66 chr5 115437789 115438152 -84191998 + L1MCc LINE L1 11 386 -6037 417 307 35 89 chr5 115438419 115438732 -84191418 + L1MCc LINE L1 818 1113 -5310 786 205 32 5 chr5 115438737 115438927 -84191223 + L1 LINE L1 2837 3031 -3115 3805 120 37 15 chr5 115438928 115439496 -84190654 + L1MA3 LINE L1 5535 6120 -185 2123 138 0 3 chr5 115439496 115439808 -84190342 - AluSq SINE Alu -2 311 1 3805 120 37 15 chr5 115439808 115439890 -84190260 + L1MA3 LINE L1 6120 6199 -106 1973 228 83 8 chr5 115439904 115440544 -84189606 + L1MCc LINE L1 2992 3679 -3262 1557 199 35 27 chr5 115440686 115441053 -84189097 + MLT1A2 LTR MaLR 1 370 -4 185 276 17 0 chr5 115441093 115441151 -84188999 + L2 LINE L2 1630 1688 -1626 208 213 106 0 chr5 115442042 115442089 -84188061 + L2 LINE L2 3221 3272 0 198 0 0 0 chr5 115442134 115442156 -84187994 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 360 0 0 0 chr5 115442155 115442195 -84187955 + (CA)n Simple_repeat Simple_repeat 1 40 0 2124 142 0 0 chr5 115444199 115444508 -84185642 - AluSx SINE Alu -3 309 1 2936 179 19 55 chr5 115444905 115445540 -84184610 + LTR9 LTR ERV1 1 612 0 22 0 0 0 chr5 115446806 115446828 -84183322 + AT_rich Low_complexity Low_complexity 1 22 0 1353 186 99 0 chr5 115447020 115447283 -84182867 - MLT1A1 LTR MaLR -1 364 76 3473 133 19 13 chr5 115447284 115447896 -84182254 - MER4B LTR ERV1 -1 778 1 539 132 0 0 chr5 115447896 115447972 -84182178 - MLT1A1 LTR MaLR -286 79 4 1070 324 34 36 chr5 115449266 115449503 -84180647 + LTR16C LTR ERVL 6 242 -249 2120 109 7 26 chr5 115449503 115449805 -84180345 - AluSx SINE Alu -16 296 1 1070 324 34 36 chr5 115449805 115450045 -84180105 + LTR16C LTR ERVL 242 482 -9 1835 154 63 30 chr5 115450126 115450489 -84179661 - THE1C LTR MaLR 0 375 1 973 228 17 100 chr5 115450557 115450978 -84179172 + L1MB7 LINE L1 4824 5209 -937 4449 199 72 14 chr5 115450999 115452803 -84177347 + L1MC2 LINE L1 4408 6319 -25 3968 193 57 12 chr5 115452818 115453762 -84176388 + L1MB7 LINE L1 5192 6177 -7 1446 103 62 33 chr5 115453774 115454047 -84176103 + L1MA4A LINE L1 6023 6303 0 22 70 0 0 chr5 115454107 115454150 -84176000 + AT_rich Low_complexity Low_complexity 1 43 0 187 357 107 21 chr5 115454346 115454486 -84175664 + MIR SINE MIR 28 179 -83 705 294 81 31 chr5 115454488 115454845 -84175305 - L2 LINE L2 -13 3300 2926 341 287 47 33 chr5 115455113 115455263 -84174887 + 7SK RNA RNA 4 155 -38 348 284 52 127 chr5 115457664 115458177 -84171973 - L2 LINE L2 -36 3277 2797 2592 230 89 40 chr5 115458177 115458263 -84171887 + L1MB7 LINE L1 4167 4247 -1937 297 0 0 0 chr5 115458263 115458296 -84171854 + (CA)n Simple_repeat Simple_repeat 1 33 0 2592 230 89 40 chr5 115458296 115458490 -84171660 + L1MB7 LINE L1 4247 4430 -1754 4274 98 10 5 chr5 115458490 115459103 -84171047 + L1PA13 LINE L1 5544 6159 -4 2592 230 89 40 chr5 115459103 115460766 -84169384 + L1MB7 LINE L1 4430 6183 -1 481 325 7 13 chr5 115461586 115461737 -84168413 - MIR3 SINE MIR -51 157 8 2113 135 14 0 chr5 115463118 115463415 -84166735 + AluSc SINE Alu 1 301 -8 350 250 54 0 chr5 115464232 115464324 -84165826 + L1ME1 LINE L1 5487 5583 -583 1381 219 114 87 chr5 115464324 115465049 -84165101 + LTR1B LTR ERV1 1 745 -81 1134 242 82 4 chr5 115465167 115465602 -84164548 + L1ME1 LINE L1 5576 6055 -123 402 234 41 0 chr5 115465604 115465775 -84164375 + (TA)n Simple_repeat Simple_repeat 2 179 0 2127 133 0 10 chr5 115466074 115466382 -84163768 + AluSx SINE Alu 1 305 -7 378 0 0 0 chr5 115466383 115466425 -84163725 + (CA)n Simple_repeat Simple_repeat 1 42 0 580 125 10 0 chr5 115466949 115467045 -84163105 + L1MA5A LINE L1 6195 6291 -6 33 0 0 0 chr5 115467045 115467078 -84163072 + AT_rich Low_complexity Low_complexity 1 33 0 1311 304 66 21 chr5 115467766 115468494 -84161656 + L2 LINE L2 2555 3312 -1 251 91 23 0 chr5 115468628 115468672 -84161478 - MER31A LTR ERV1 -6 479 435 1442 58 69 0 chr5 115468672 115468861 -84161289 - AluY SINE Alu -4 307 106 2300 143 7 37 chr5 115468861 115469316 -84160834 - MER31A LTR ERV1 -44 441 1 604 259 118 0 chr5 115469561 115469731 -84160419 - MIR SINE MIR 0 262 73 2376 162 54 2 chr5 115470152 115470559 -84159591 + MSTA LTR MaLR 1 428 0 210 216 125 45 chr5 115470739 115470827 -84159323 - L2 LINE L2 -13 3300 3206 225 0 0 0 chr5 115471694 115471719 -84158431 + (A)n Simple_repeat Simple_repeat 1 25 0 440 317 99 7 chr5 115472011 115472153 -84157997 - L2 LINE L2 -16 3256 3102 22 0 0 0 chr5 115473169 115473191 -84156959 + AT_rich Low_complexity Low_complexity 1 22 0 351 300 9 9 chr5 115473277 115473387 -84156763 + MIR3 SINE MIR 67 176 -32 185 338 25 12 chr5 115473430 115473510 -84156640 + MER5B DNA MER1_type 95 175 -3 271 358 83 18 chr5 115474195 115474304 -84155846 - MIR SINE MIR -75 133 18 2403 113 11 21 chr5 115474419 115474798 -84155352 - THE1C LTR MaLR 0 375 1 9939 124 40 7 chr5 115474798 115476328 -84153822 - THE1C-int LTR MaLR 0 1580 1 2384 118 16 19 chr5 115476328 115476702 -84153448 - THE1C LTR MaLR 0 375 3 377 269 83 33 chr5 115478384 115478565 -84151585 - MIR SINE MIR -14 248 61 420 271 96 42 chr5 115478667 115478833 -84151317 + MIR3 SINE MIR 19 193 -15 195 245 82 0 chr5 115479382 115479431 -84150719 - L2 LINE L2 -6 3307 3255 225 284 47 74 chr5 115479581 115479729 -84150421 - L2 LINE L2 -179 3093 2950 1978 98 72 7 chr5 115479873 115480150 -84150000 - AluSg SINE Alu -10 300 6 1127 110 7 0 chr5 115480259 115480413 -84149737 - AluSq SINE Alu -20 293 139 5871 29 0 0 chr5 115480571 115481254 -84148896 + L1PA3 LINE L1 5473 6155 0 306 222 37 0 chr5 115481954 115482035 -84148115 - L1ME4a LINE L1 -2 6119 6036 719 240 73 5 chr5 115483328 115483520 -84146630 - MSTD LTR MaLR -12 384 180 1880 138 60 0 chr5 115483552 115483835 -84146315 - AluSx SINE Alu -12 300 1 640 213 86 35 chr5 115483835 115484032 -84146118 - MIR SINE MIR -47 215 9 194 300 50 0 chr5 115485169 115485229 -84144921 - L2 LINE L2 -6 3307 3245 21 57 0 0 chr5 115485317 115485352 -84144798 + AT_rich Low_complexity Low_complexity 1 35 0 688 322 13 15 chr5 115486610 115487082 -84143068 - L1M4 LINE L1 -3382 2764 2294 1538 128 98 49 chr5 115487925 115488191 -84141959 + AluSx SINE Alu 1 279 -33 21 0 0 0 chr5 115488554 115488575 -84141575 + AT_rich Low_complexity Low_complexity 1 21 0 1831 124 4 0 chr5 115488771 115489028 -84141122 - AluSc SINE Alu -51 258 1 384 303 72 20 chr5 115490251 115490403 -84139747 + MIR3 SINE MIR 43 202 -6 369 277 166 10 chr5 115490741 115490924 -84139226 + MIR3 SINE MIR 12 221 -41 189 0 0 0 chr5 115491319 115491340 -84138810 + (T)n Simple_repeat Simple_repeat 1 21 0 1610 206 43 53 chr5 115491719 115492208 -84137942 - MLT1D LTR MaLR 0 505 22 337 232 27 18 chr5 115492524 115492646 -84137504 + L1ME4a LINE L1 5711 5835 -286 4938 105 40 55 chr5 115493417 115494300 -84135850 + MER4D LTR ERV1 4 872 0 2720 171 23 94 chr5 115494568 115495312 -84134838 + LTR8 LTR ERV1 1 691 0 393 22 0 0 chr5 115495606 115495652 -84134498 + (CA)n Simple_repeat Simple_repeat 1 46 0 493 331 80 46 chr5 115495653 115496043 -84134107 - L2 LINE L2 -480 2834 2432 1424 206 41 33 chr5 115496265 115496633 -84133517 - MLT1D LTR MaLR -134 371 1 36 23 0 0 chr5 115497057 115497100 -84133050 + AT_rich Low_complexity Low_complexity 1 43 0 370 293 9 0 chr5 115498223 115498339 -84131811 + L2 LINE L2 2423 2539 -775 373 318 53 56 chr5 115498926 115499322 -84130828 + HERV16 LTR ERVL 3394 3788 -1208 1144 350 67 30 chr5 115499368 115500482 -84129668 + HERV16 LTR ERVL 4169 5323 -441 580 326 51 39 chr5 115500756 115501087 -84129063 + LTR16A LTR ERVL 110 444 -6 821 316 96 31 chr5 115501123 115501540 -84128610 + L3 LINE CR1 1013 1456 -121 1649 176 75 20 chr5 115501540 115501886 -84128264 - MLT1A1 LTR MaLR 0 365 1 1221 236 123 42 chr5 115501970 115502547 -84127603 - MLT1E3 LTR MaLR 0 624 1 22 0 0 0 chr5 115503894 115503916 -84126234 + AT_rich Low_complexity Low_complexity 1 22 0 3074 247 29 13 chr5 115504606 115505739 -84124411 + L1M1 LINE L1 3406 4564 -3001 1987 162 43 13 chr5 115505742 115506258 -84123892 + L1MA9 LINE L1 5143 5672 -640 1399 173 4 33 chr5 115506289 115506532 -84123618 + AluJo SINE Alu 7 242 -70 188 33 0 33 chr5 115506564 115506594 -84123556 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 580 164 9 0 chr5 115506611 115506721 -84123429 + L1MA9 LINE L1 5679 5789 -523 1933 178 39 29 chr5 115506721 115506880 -84123270 - Tigger2a DNA MER2_type -2274 434 278 180 0 0 0 chr5 115506880 115506900 -84123250 + (TA)n Simple_repeat Simple_repeat 1 20 0 1933 178 39 29 chr5 115506900 115507155 -84122995 - Tigger2a DNA MER2_type -2430 278 16 226 196 39 0 chr5 115507158 115507209 -84122941 - Tigger2a DNA MER2_type -373 61 9 315 0 0 0 chr5 115507216 115507251 -84122899 + (TG)n Simple_repeat Simple_repeat 2 36 0 2108 194 38 18 chr5 115507254 115507753 -84122397 + L1MA9 LINE L1 5782 6290 -22 212 183 0 33 chr5 115508227 115508287 -84121863 + (CATA)n Simple_repeat Simple_repeat 1 58 0 408 321 22 72 chr5 115508489 115508735 -84121415 + MIR3 SINE MIR 1 232 -3 1097 168 69 0 chr5 115509045 115509248 -84120902 + MER20 DNA MER1_type 1 217 -2 1029 280 85 81 chr5 115509971 115510478 -84119672 + MLT1G1 LTR MaLR 76 584 -11 2020 135 0 10 chr5 115510803 115511107 -84119043 - AluSq SINE Alu -11 302 2 234 116 0 0 chr5 115511117 115511160 -84118990 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 776 197 14 0 chr5 115511167 115511309 -84118841 - AluJb SINE Alu -33 279 136 318 152 89 0 chr5 115512564 115512643 -84117507 - L1MB1 LINE L1 0 6168 6083 323 326 43 43 chr5 115512878 115513065 -84117085 + MIR SINE MIR 21 207 -55 231 224 20 0 chr5 115513122 115513171 -84116979 - MLT1I LTR MaLR 0 409 360 465 290 65 35 chr5 115513298 115513498 -84116652 - MLT1I LTR MaLR -203 206 1 2169 202 44 0 chr5 115514153 115514533 -84115617 - L1MA4 LINE L1 -6 6476 6067 1574 190 0 10 chr5 115514533 115514822 -84115328 - AluJb SINE Alu -6 306 21 2169 202 44 0 chr5 115514822 115514945 -84115205 - L1MA4 LINE L1 -415 6067 5951 6386 45 0 1 chr5 115514987 115515760 -84114390 - L1PA5 LINE L1 -1 6153 5382 661 122 0 0 chr5 115515760 115515858 -84114292 - L1MA4 LINE L1 -514 5968 5871 3144 109 9 2 chr5 115515858 115516299 -84113851 + MLT2A1 LTR ERVL 1 444 0 9120 76 0 11 chr5 115516299 115517487 -84112663 + HERVL-A1 LTR ERVL 1 1175 -4479 2642 99 25 5 chr5 115517478 115517870 -84112280 + HERVL-A1 LTR ERVL 5255 5654 0 * 3158 62 4 94 chr5 115517870 115518252 -84111898 + MLT2A1 LTR ERVL 1 331 -113 207 0 0 0 chr5 115518252 115518275 -84111875 + (TA)n Simple_repeat Simple_repeat 2 24 0 3158 62 4 94 chr5 115518275 115518380 -84111770 + MLT2A1 LTR ERVL 331 444 0 12739 206 34 27 chr5 115518380 115518968 -84111182 - L1MA4 LINE L1 -607 5875 5293 1929 116 4 4 chr5 115518968 115519235 -84110915 - AluSc SINE Alu -13 296 30 12739 206 34 27 chr5 115519235 115522724 -84107426 - L1MA4 LINE L1 -1189 5293 1751 1542 155 56 53 chr5 115522724 115523055 -84107095 - THE1C LTR MaLR 0 375 41 2373 89 0 0 chr5 115523055 115523357 -84106793 - AluSq SINE Alu -11 302 1 1542 155 56 53 chr5 115523357 115523399 -84106751 - THE1C LTR MaLR -334 41 1 12739 206 34 27 chr5 115523399 115524416 -84105734 - L1MA4 LINE L1 -4731 1751 743 3291 231 19 14 chr5 115524426 115525130 -84105020 - L1MA4 LINE L1 -4621 707 1 19188 174 26 24 chr5 115525170 115532871 -84097279 + L1MA1 LINE L1 12 7721 0 213 231 0 0 chr5 115532952 115533004 -84097146 + A-rich Low_complexity Low_complexity 2 53 0 270 230 92 23 chr5 115533261 115533348 -84096802 + MLT1F LTR MaLR 282 374 -168 270 200 173 0 chr5 115533361 115533436 -84096714 + MLT1H LTR MaLR 420 507 -42 471 321 103 23 chr5 115533470 115533915 -84096235 + L2 LINE L2 2827 3313 0 2350 85 0 0 chr5 115534207 115534500 -84095650 - AluSg1 SINE Alu -16 293 1 243 61 0 0 chr5 115535216 115535249 -84094901 + (TC)n Simple_repeat Simple_repeat 2 34 0 498 17 0 0 chr5 115535249 115535308 -84094842 + (CA)n Simple_repeat Simple_repeat 1 59 0 198 162 0 59 chr5 115535547 115535615 -84094535 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 885 289 53 4 chr5 115536746 115536992 -84093158 - MIR SINE MIR 0 262 5 822 252 98 78 chr5 115537122 115537222 -84092928 - LTR50 LTR ERVL 0 795 698 3566 178 38 15 chr5 115537222 115537907 -84092243 - MER44D DNA MER2_type -3 702 2 822 252 98 78 chr5 115537907 115538473 -84091677 - LTR50 LTR ERVL -97 698 29 4739 254 75 42 chr5 115538506 115539929 -84090221 - MSTD-int LTR MaLR -264 1471 2 1924 201 26 13 chr5 115539929 115540318 -84089832 - MSTD LTR MaLR -2 394 1 1806 120 106 38 chr5 115540708 115541049 -84089101 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr5 115541143 115541164 -84088986 + AT_rich Low_complexity Low_complexity 1 21 0 247 291 0 0 chr5 115543666 115543721 -84086429 + MIR SINE MIR 185 239 -23 222 230 27 68 chr5 115544356 115544430 -84085720 + MIR SINE MIR 83 153 -109 311 43 0 22 chr5 115544632 115544678 -84085472 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 267 157 0 0 chr5 115544687 115544738 -84085412 + CT-rich Low_complexity Low_complexity 2 52 0 699 12 0 0 chr5 115544738 115544818 -84085332 + (TTTCC)n Simple_repeat Simple_repeat 1 80 0 287 307 0 0 chr5 115545138 115545213 -84084937 - L2 LINE L2 -10 3262 3188 956 165 57 0 chr5 115645686 115645844 -83984306 + AluJb SINE Alu 133 299 -13 2043 118 45 0 chr5 115645850 115646139 -83984011 + AluSx SINE Alu 3 304 -8 207 355 0 0 chr5 115646139 115646201 -83983949 - L2 LINE L2 -83 3189 3128 183 352 33 33 chr5 115646232 115646323 -83983827 - MIR SINE MIR -150 112 22 207 174 0 65 chr5 115647000 115647046 -83983104 + polypyrimidine Low_complexity Low_complexity 3 45 0 527 269 22 0 chr5 115647566 115647700 -83982450 + MIR SINE MIR 60 196 -66 200 360 8 56 chr5 115648219 115648344 -83981806 - L3 LINE CR1 -32 1545 1427 192 263 0 0 chr5 115648473 115648511 -83981639 + MIR SINE MIR 87 124 -84 217 389 0 23 chr5 115648710 115648841 -83981309 + L3 LINE CR1 1007 1134 -443 437 358 110 4 chr5 115648893 115649139 -83981011 + L3 LINE CR1 1264 1535 -42 997 258 18 4 chr5 115649200 115649429 -83980721 + MIR SINE MIR 29 260 -2 449 292 34 64 chr5 115649476 115649743 -83980407 - L2 LINE L2 -40 3273 3015 186 103 0 0 chr5 115649980 115650009 -83980141 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 186 189 0 0 chr5 115650358 115650395 -83979755 + G-rich Low_complexity Low_complexity 3 39 0 25 31 0 0 chr5 115650716 115650748 -83979402 + GC_rich Low_complexity Low_complexity 1 32 0 842 175 0 7 chr5 115651535 115651678 -83978472 + MER5B DNA MER1_type 1 142 -36 282 235 317 29 chr5 115651691 115651934 -83978216 + L2 LINE L2 1650 1962 -1352 2093 115 0 0 chr5 115651970 115652249 -83977901 - AluSx SINE Alu -19 293 15 443 187 0 0 chr5 115652340 115652431 -83977719 + L1MC4 LINE L1 7685 7775 -267 525 188 31 0 chr5 115652458 115652554 -83977596 - MER5A DNA MER1_type -90 99 1 371 149 81 0 chr5 115652554 115652628 -83977522 + L1MC4 LINE L1 7800 7879 -163 7909 26 0 0 chr5 115652728 115653738 -83976412 + L1P LINE L1 2296 3305 -2841 366 123 0 0 chr5 115653950 115654015 -83976135 - L1MA7 LINE L1 0 6291 6227 1903 127 14 93 chr5 115654015 115654432 -83975718 + MER4B LTR ERV1 2 385 -225 345 125 3 0 chr5 115654445 115654504 -83975646 - MER4E LTR ERV1 -118 659 487 34 0 0 0 chr5 115654574 115654608 -83975542 + AT_rich Low_complexity Low_complexity 1 34 0 1100 96 18 6 chr5 115654622 115654789 -83975361 + MER4E LTR ERV1 611 779 0 737 140 42 0 chr5 115654792 115654935 -83975215 - L1MA6 LINE L1 -63 6237 6089 212 0 36 0 chr5 115656156 115656184 -83973966 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 609 118 11 0 chr5 115656184 115656277 -83973873 - L1PA10 LINE L1 -15 6153 6060 282 193 0 0 chr5 115656288 115656345 -83973805 + (TA)n Simple_repeat Simple_repeat 2 58 0 2293 134 20 3 chr5 115657316 115657674 -83972476 - THE1B LTR MaLR 0 364 1 263 316 115 7 chr5 115657678 115657745 -83972405 - MIR SINE MIR -35 227 169 1751 210 70 84 chr5 115657745 115658398 -83971752 + LTR48B LTR ERV1 1 644 0 263 316 115 7 chr5 115658398 115658469 -83971681 - MIR SINE MIR -93 169 74 495 113 0 0 chr5 115659085 115659165 -83970985 + (TG)n Simple_repeat Simple_repeat 2 81 0 385 333 126 13 chr5 115659391 115659622 -83970528 - MIR SINE MIR -3 259 3 467 198 0 0 chr5 115660253 115660334 -83969816 - Tigger5 DNA MER2_type -2 2321 2241 1238 184 105 45 chr5 115660346 115660613 -83969537 - AluJo SINE Alu -24 288 6 1150 96 0 0 chr5 115660613 115660770 -83969380 - Tigger5 DNA MER2_type -95 2228 2072 248 273 0 23 chr5 115660770 115660858 -83969292 + (TA)n Simple_repeat Simple_repeat 2 87 0 198 71 0 0 chr5 115660861 115660889 -83969261 + (CA)n Simple_repeat Simple_repeat 1 28 0 1817 143 127 16 chr5 115662212 115662597 -83967553 + MSTA LTR MaLR 1 428 0 7579 181 114 1 chr5 115662597 115664081 -83966069 + MSTA-int LTR MaLR 1 1651 0 1849 152 152 8 chr5 115664081 115664455 -83965695 + MSTA LTR MaLR 1 428 0 184 360 132 24 chr5 115664470 115664759 -83965391 - L2 LINE L2 -108 3164 2845 238 311 113 33 chr5 115664896 115665047 -83965103 + LTR67 LTR ERVL 110 272 -285 380 271 33 33 chr5 115665147 115665298 -83964852 + LTR67 LTR ERVL 400 550 -7 406 258 189 25 chr5 115667318 115667562 -83962588 - L1ME4a LINE L1 -226 5895 5612 24 91 0 0 chr5 115668049 115668115 -83962035 + AT_rich Low_complexity Low_complexity 1 66 0 210 349 15 0 chr5 115668586 115668652 -83961498 - MIR SINE MIR -114 94 28 1600 233 14 11 chr5 115669015 115669371 -83960779 + MLT2D LTR ERVL 1 357 -57 321 26 0 0 chr5 115669405 115669443 -83960707 + (TA)n Simple_repeat Simple_repeat 2 39 0 240 196 36 0 chr5 115669513 115669569 -83960581 + MLT2D LTR ERVL 334 391 -6 22 0 0 0 chr5 115670202 115670224 -83959926 + AT_rich Low_complexity Low_complexity 1 22 0 1890 142 3 26 chr5 115671196 115671499 -83958651 - AluSx SINE Alu -13 299 4 440 286 104 43 chr5 115672526 115672757 -83957393 + MIR SINE MIR 2 246 -16 22 56 0 0 chr5 115673164 115673200 -83956950 + AT_rich Low_complexity Low_complexity 1 36 0 1194 115 11 0 chr5 115673322 115673496 -83956654 + L1PA12 LINE L1 5978 6153 -15 22 0 0 0 chr5 115674622 115674644 -83955506 + AT_rich Low_complexity Low_complexity 1 22 0 195 235 0 0 chr5 115675618 115675669 -83954481 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 2030 138 17 0 chr5 115675762 115676110 -83954040 + L1MA8 LINE L1 5938 6291 0 297 309 252 20 chr5 115676136 115676616 -83953534 + L2 LINE L2 2707 3313 0 2264 101 0 0 chr5 115676884 115677180 -83952970 - AluSc SINE Alu -13 296 1 22 99 0 0 chr5 115677459 115677530 -83952620 + AT_rich Low_complexity Low_complexity 1 71 0 27 0 0 0 chr5 115677545 115677572 -83952578 + AT_rich Low_complexity Low_complexity 1 27 0 501 279 291 36 chr5 115677707 115678143 -83952007 + L2 LINE L2 2778 3313 0 282 303 11 11 chr5 115678605 115678694 -83951456 + MER5B DNA MER1_type 4 92 -86 5380 176 17 6 chr5 115678723 115679847 -83950303 + L1MA4 LINE L1 5166 6300 0 1947 205 16 33 chr5 115679858 115679950 -83950200 + L1MA7 LINE L1 5813 5905 -386 3395 180 15 86 chr5 115679950 115680433 -83949717 + MER44D DNA MER2_type 1 517 -1970 1709 194 0 3 chr5 115680433 115680732 -83949418 + AluJb SINE Alu 7 304 -8 3395 180 15 86 chr5 115680732 115681003 -83949147 + MER44D DNA MER2_type 517 571 -1916 2025 154 0 6 chr5 115681003 115681315 -83948835 + AluSg SINE Alu 1 310 0 3395 180 15 86 chr5 115681315 115681348 -83948802 + MER44D DNA MER2_type 571 605 0 1947 205 16 33 chr5 115681348 115681742 -83948408 + L1MA7 LINE L1 5905 6291 0 2212 111 39 33 chr5 115681790 115682152 -83947998 + THE1B LTR MaLR 1 364 0 465 278 92 0 chr5 115682220 115682393 -83947757 + LTR37A LTR ERV1 226 414 -12 2857 6 0 0 chr5 115682409 115682723 -83947427 - AluYb8 SINE Alu -4 314 1 22 0 0 0 chr5 115682723 115682745 -83947405 + AT_rich Low_complexity Low_complexity 1 22 0 413 333 47 12 chr5 115683620 115683791 -83946359 - MER5B DNA MER1_type 0 178 2 443 296 8 0 chr5 115683925 115684050 -83946100 - MIR SINE MIR 0 262 137 376 276 26 26 chr5 115684054 115684170 -83945980 - MIR SINE MIR 0 262 147 486 206 22 0 chr5 115684227 115684319 -83945831 - MER2 DNA MER2_type -249 96 3 540 228 0 18 chr5 115684319 115684433 -83945717 - MIR SINE MIR -119 143 32 25 0 0 0 chr5 115685065 115685090 -83945060 + AT_rich Low_complexity Low_complexity 1 25 0 2183 99 3 10 chr5 115687137 115687431 -83942719 + AluSp SINE Alu 1 292 -21 186 43 0 0 chr5 115688384 115688407 -83941743 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2337 68 10 0 chr5 115689467 115689775 -83940375 - AluY SINE Alu 0 311 1 565 306 48 15 chr5 115689996 115690202 -83939948 - MIR SINE MIR 0 262 50 28 0 0 0 chr5 115690370 115690398 -83939752 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 115691448 115691480 -83938670 + AT_rich Low_complexity Low_complexity 1 32 0 23 54 0 0 chr5 115692322 115692359 -83937791 + AT_rich Low_complexity Low_complexity 1 37 0 216 0 0 0 chr5 115692789 115692813 -83937337 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr5 115693808 115693829 -83936321 + AT_rich Low_complexity Low_complexity 1 21 0 298 329 42 36 chr5 115795488 115795655 -83834495 - L2 LINE L2 -919 2395 2228 432 263 70 47 chr5 115795940 115796111 -83834039 + MIR3 SINE MIR 3 177 -31 588 190 172 23 chr5 115796541 115796847 -83833303 - L1M4c LINE L1 -3778 2866 2510 741 128 17 17 chr5 115796847 115796988 -83833162 - AluSp/q SINE Alu 0 310 170 1156 248 56 13 chr5 115797002 115797568 -83832582 - L1M4c LINE L1 -4148 2498 1818 545 250 75 40 chr5 115797626 115797878 -83832272 - L1M4c LINE L1 -6280 262 2 569 245 135 36 chr5 115802421 115802613 -83827537 + MIR SINE MIR 52 262 0 1425 274 137 11 chr5 115802707 115803232 -83826918 - L2 LINE L2 -418 2896 2306 293 211 0 0 chr5 115803273 115803325 -83826825 + Tigger5 DNA MER2_type 1 52 -2271 * 365 229 0 0 chr5 115803296 115803366 -83826784 + Tigger5 DNA MER2_type 2250 2319 -4 258 163 0 0 chr5 115803372 115803421 -83826729 - L2 LINE L2 -1070 2244 2196 1048 264 17 62 chr5 115803437 115803790 -83826360 + L2 LINE L2 2621 2957 -357 1039 270 89 61 chr5 115803819 115804245 -83825905 + L2 LINE L2 2862 3299 -14 1875 120 8 4 chr5 115804474 115804741 -83825409 - AluSg SINE Alu 0 310 43 197 270 183 24 chr5 115805280 115805406 -83824744 - MIR SINE MIR -52 210 65 24 0 0 0 chr5 115806396 115806420 -83823730 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr5 115807025 115807050 -83823100 + AT_rich Low_complexity Low_complexity 1 25 0 516 296 128 1 chr5 115808324 115808520 -83821630 - MIR SINE MIR -19 243 19 204 338 14 50 chr5 115808523 115808662 -83821488 - MIR SINE MIR -70 192 59 256 100 20 20 chr5 115808722 115808772 -83821378 + (GAAA)n Simple_repeat Simple_repeat 2 51 0 300 255 0 0 chr5 115808875 115808977 -83821173 + A-rich Low_complexity Low_complexity 1 102 0 21 0 0 0 chr5 115809791 115809812 -83820338 + AT_rich Low_complexity Low_complexity 1 21 0 577 315 123 22 chr5 115809975 115810391 -83819759 + L2 LINE L2 1698 2155 -1159 225 314 0 0 chr5 115818741 115818792 -83811358 + (CA)n Simple_repeat Simple_repeat 2 52 0 440 338 30 42 chr5 115819863 115820289 -83809861 + MER110-int LTR ERV1 2105 2525 -2122 315 221 158 11 chr5 115820666 115820761 -83809389 + MIR SINE MIR 45 153 -109 6806 49 2 14 chr5 115821513 115822592 -83807558 + L1PA4 LINE L1 5088 6155 0 1854 198 30 23 chr5 115822718 115823344 -83806806 - L1MC/D LINE L1 -645 5688 5057 190 235 294 0 chr5 115823548 115823701 -83806449 + MER5C DNA MER1_type 124 321 -3 819 219 22 0 chr5 115823843 115824026 -83806124 + AluSp SINE Alu 1 187 -126 2225 210 15 57 chr5 115824156 115824770 -83805380 - L1M1 LINE L1 -6964 601 14 4942 36 8 18 chr5 115825558 115826445 -83803705 - L1P2 LINE L1 -531 5624 4745 23 0 0 0 chr5 115826461 115826484 -83803666 + AT_rich Low_complexity Low_complexity 1 23 0 2705 153 39 19 chr5 115827401 115827937 -83802213 + L1MA4A LINE L1 5757 6303 0 533 208 122 77 chr5 115827975 115828196 -83801954 + MIR SINE MIR 4 234 -28 227 156 22 78 chr5 115828441 115828531 -83801619 + T-rich Low_complexity Low_complexity 5 89 0 1128 118 45 50 chr5 115829066 115829287 -83800863 + THE1C LTR MaLR 156 375 0 5009 219 22 10 chr5 115829287 115830610 -83799540 + L1M2 LINE L1 2791 4129 -2719 1625 107 38 4 chr5 115830754 115831016 -83799134 + AluY SINE Alu 37 307 -4 6477 58 10 2 chr5 115831771 115832550 -83797600 - L1PA7 LINE L1 0 6154 5383 2288 86 3 3 chr5 115832550 115832841 -83797309 - AluY SINE Alu -18 293 3 6477 58 10 2 chr5 115832841 115833708 -83796442 - L1PA7 LINE L1 -771 5383 4527 6707 61 22 0 chr5 115834158 115835090 -83795060 + L1PA4 LINE L1 5202 6152 -3 2355 77 7 3 chr5 115835582 115835892 -83794258 + AluY SINE Alu 1 311 0 780 208 0 6 chr5 115835943 115836116 -83794034 - L1MA6 LINE L1 0 6300 6129 3826 147 79 0 chr5 115836116 115836409 -83793741 + L1MA6 LINE L1 5462 5731 -569 216 0 0 0 chr5 115836409 115836433 -83793717 + (TG)n Simple_repeat Simple_repeat 2 25 0 3826 147 79 0 chr5 115836433 115836820 -83793330 + L1MA6 LINE L1 5731 6196 -104 532 261 229 23 chr5 115837309 115837527 -83792623 - LTR33 LTR ERVL -256 265 3 15970 43 0 1 chr5 115837587 115839575 -83790575 + L1P3 LINE L1 2604 4589 -1557 1089 77 7 0 chr5 115840077 115840232 -83789918 + L1P3 LINE L1 5327 5482 -690 248 298 73 74 chr5 115841633 115842630 -83787520 + L1ME LINE L1 527 1585 -4725 5722 145 14 38 chr5 115842935 115843546 -83786604 - L1MA4 LINE L1 -9 6291 5715 1514 199 3 3 chr5 115843546 115843828 -83786322 - AluJb SINE Alu -11 301 20 5722 145 14 38 chr5 115843828 115844321 -83785829 - L1MA4 LINE L1 -585 5715 5212 883 269 89 61 chr5 115844342 115845420 -83784730 + L1ME LINE L1 4249 5782 -371 25 0 0 0 chr5 115845666 115845691 -83784459 + AT_rich Low_complexity Low_complexity 1 25 0 240 279 36 18 chr5 115845745 115845856 -83784294 + L1ME LINE L1 5378 5490 -676 268 156 37 128 chr5 115845885 115845994 -83784156 + L1M4 LINE L1 4478 4576 -1570 384 22 0 0 chr5 115846058 115846103 -83784047 + (TG)n Simple_repeat Simple_repeat 2 46 0 25 31 0 0 chr5 115846150 115846182 -83783968 + AT_rich Low_complexity Low_complexity 1 32 0 1431 216 16 20 chr5 115846185 115846490 -83783660 + AluJo SINE Alu 1 304 -8 1247 216 39 22 chr5 115847035 115847344 -83782806 - MLT1A2 LTR MaLR -16 358 40 388 143 16 0 chr5 115847479 115847542 -83782608 - MLT1A2 LTR MaLR -310 64 1 982 140 54 37 chr5 115847808 115848023 -83782127 - THE1C LTR MaLR 0 375 174 576 210 8 11 chr5 115848188 115848312 -83781838 - MSTA LTR MaLR -235 129 1 1314 168 32 108 chr5 115848361 115848677 -83781473 + AluJo SINE Alu 1 292 -20 246 197 145 0 chr5 115849714 115849790 -83780360 + L1ME4a LINE L1 6009 6095 -26 583 208 67 0 chr5 115850261 115850381 -83779769 + MIR SINE MIR 111 238 -24 5298 65 10 0 chr5 115850835 115851527 -83778623 + L1PA7 LINE L1 5451 6149 -5 393 210 70 0 chr5 115851980 115852080 -83778070 - MER5C DNA MER1_type -212 112 6 261 98 0 0 chr5 115852434 115852475 -83777675 + (TTA)n Simple_repeat Simple_repeat 2 42 0 4767 27 4 0 chr5 115852527 115853089 -83777061 + L1PA4 LINE L1 5592 6155 0 2076 105 3 14 chr5 115854632 115854969 -83775181 - AluSx SINE Alu 0 334 1 622 235 0 0 chr5 115855128 115855247 -83774903 + MLT1E2 LTR MaLR 360 478 -148 2986 143 30 82 chr5 115855257 115856029 -83774121 - L1MA9 LINE L1 -5 6307 5576 823 94 0 0 chr5 115856135 115856241 -83773909 - AluSq/x SINE Alu -206 106 1 1290 130 9 9 chr5 115856253 115856508 -83773642 - L1MA9 LINE L1 -743 5403 5219 771 231 12 0 chr5 115856510 115856670 -83773480 + MLT1E2 LTR MaLR 465 626 0 2042 143 0 0 chr5 115857251 115857545 -83772605 - AluSx SINE Alu -18 294 1 5810 167 28 18 chr5 115857546 115858798 -83771352 - L1MC1 LINE L1 -10 6323 5057 286 216 40 111 chr5 115859192 115859308 -83770842 + MER5B DNA MER1_type 66 161 -17 2242 112 7 0 chr5 115859311 115859616 -83770534 + AluSx SINE Alu 1 307 -5 222 278 0 42 chr5 115860132 115860204 -83769946 + GA-rich Low_complexity Low_complexity 4 72 0 228 263 118 0 chr5 115860514 115860590 -83769560 + MIR SINE MIR 117 201 -61 289 324 40 7 chr5 115862003 115862151 -83767999 + MIR SINE MIR 4 156 -106 30 69 0 0 chr5 115862722 115862780 -83767370 + AT_rich Low_complexity Low_complexity 1 58 0 246 308 14 28 chr5 115862951 115863094 -83767056 + L1M4 LINE L1 3705 3845 -2301 216 135 0 0 chr5 115863314 115863351 -83766799 + (TA)n Simple_repeat Simple_repeat 1 37 0 877 273 4 50 chr5 115864228 115864466 -83765684 + MLT1G LTR MaLR 13 239 -351 425 252 138 60 chr5 115864778 115864996 -83765154 - L2 LINE L2 -341 2973 2739 228 250 135 0 chr5 115865128 115865232 -83764918 - MLT1L LTR MaLR -22 593 476 330 239 0 0 chr5 115865441 115865506 -83764644 - MLT1L LTR MaLR -403 212 148 334 73 0 0 chr5 115865506 115865547 -83764603 - MER1B DNA MER1_type 0 333 293 * 1267 186 0 5 chr5 115865546 115865761 -83764389 - MER1B DNA MER1_type -83 214 1 321 214 24 24 chr5 115865761 115865843 -83764307 - MLT1L LTR MaLR -460 155 74 28 0 0 0 chr5 115866798 115866826 -83763324 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr5 115867739 115867781 -83762369 + AT_rich Low_complexity Low_complexity 1 42 0 1702 270 119 25 chr5 115868543 115869221 -83760929 - L2 LINE L2 -433 2881 2140 402 299 80 50 chr5 115869221 115869422 -83760728 - L2 LINE L2 -2228 1086 880 210 391 11 11 chr5 115869495 115869582 -83760568 - L2 LINE L2 -84 3188 3102 487 307 24 0 chr5 115869725 115869852 -83760298 - L2 LINE L2 0 3272 3143 9487 195 53 19 chr5 115870340 115872698 -83757452 + L1 LINE L1 2951 5389 -757 1625 165 94 6 chr5 115872700 115873051 -83757099 + Ricksha DNA DNA 2431 2812 -434 295 338 35 0 chr5 115873177 115873322 -83756828 + MIR SINE MIR 7 156 -106 29 70 0 0 chr5 115873793 115873850 -83756300 + AT_rich Low_complexity Low_complexity 1 57 0 361 298 45 68 chr5 115874021 115874537 -83755613 + L1ME2 LINE L1 3705 4208 -1938 460 329 54 39 chr5 115875186 115875572 -83754578 + L1 LINE L1 2706 3097 -3049 526 290 75 57 chr5 115875576 115876121 -83754029 + L1PA8 LINE L1 5309 5863 -309 * 2343 233 96 8 chr5 115875665 115876322 -83753828 + L1ME2 LINE L1 5391 6105 -59 1164 285 77 17 chr5 115876323 115876857 -83753293 + MLT1G1 LTR MaLR 6 516 -39 294 198 66 138 chr5 115876962 115877129 -83753021 - MLT1J LTR MaLR -11 500 346 207 285 131 23 chr5 115877277 115877407 -83752743 + L2 LINE L2 1285 1428 -1886 1591 126 44 4 chr5 115877417 115877687 -83752463 + LTR23 LTR ERV1 157 437 0 291 122 0 0 chr5 115877931 115877980 -83752170 + (TC)n Simple_repeat Simple_repeat 2 50 0 256 273 0 0 chr5 115877980 115878035 -83752115 + (CATA)n Simple_repeat Simple_repeat 2 56 0 216 301 50 87 chr5 115878085 115878304 -83751846 + L3 LINE CR1 1066 1276 -301 225 0 0 0 chr5 115878358 115878383 -83751767 + (TG)n Simple_repeat Simple_repeat 2 26 0 1169 153 143 29 chr5 115878951 115879258 -83750892 + MER4A LTR ERV1 1 342 -322 505 144 246 8 chr5 115879319 115879437 -83750713 + MER4C LTR ERV1 300 445 -20 6499 67 16 25 chr5 115879780 115881428 -83748722 + L1PA7 LINE L1 4527 6154 0 2200 91 3 3 chr5 115882186 115882493 -83747657 - AluY SINE Alu -4 307 1 43141 48 4 1 chr5 115882588 115888724 -83741426 + L1PA4 LINE L1 1 6155 0 269 342 51 43 chr5 115889187 115889304 -83740846 + MER110-int LTR ERV1 380 497 -6261 274 74 37 0 chr5 115889317 115889371 -83740779 + (CAAAA)n Simple_repeat Simple_repeat 5 60 0 705 82 0 0 chr5 115891004 115891101 -83739049 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 540 338 62 33 chr5 115891613 115892098 -83738052 + MER110-int LTR ERV1 127 3816 -3275 290 333 54 54 chr5 115892762 115893113 -83737037 + MER110-int LTR ERV1 3375 3725 -3076 441 344 29 41 chr5 115893815 115894257 -83735893 + MER110-int LTR ERV1 2105 2541 -2106 239 196 0 0 chr5 115895968 115896014 -83734136 - L1MC4 LINE L1 -1338 6704 6659 414 57 0 0 chr5 115896014 115896067 -83734083 + (TG)n Simple_repeat Simple_repeat 2 54 0 6012 202 7 11 chr5 115897364 115898505 -83731645 + L1MA2 LINE L1 22 1157 -6408 * 14705 173 20 27 chr5 115898501 115902110 -83728040 + L1MA2 LINE L1 2866 6442 -1152 2291 75 13 13 chr5 115902110 115902415 -83727735 + AluY SINE Alu 1 305 -6 14705 173 20 27 chr5 115902415 115902822 -83727328 + L1MA2 LINE L1 6442 6851 -743 4925 128 30 11 chr5 115902990 115903834 -83726316 + L1MA2 LINE L1 6858 7717 -6 267 233 22 100 chr5 115903997 115904087 -83726063 - MER101 LTR ERV1 -29 445 363 537 250 91 87 chr5 115904181 115904457 -83725693 - MER101B LTR ERV1 -293 277 1 356 304 89 11 chr5 115905704 115905895 -83724255 + Tigger4(Zombi) DNA MER2_type 741 946 -1785 3748 96 6 41 chr5 115905897 115906508 -83723642 + MER4B LTR ERV1 1 750 -29 3185 156 27 2 chr5 115906508 115907022 -83723128 - MER1A DNA MER1_type 0 527 1 3748 96 6 41 chr5 115907022 115907051 -83723099 + MER4B LTR ERV1 750 778 -1 544 306 71 67 chr5 115907070 115907664 -83722486 + Tigger4(Zombi) DNA MER2_type 975 1570 -1161 2070 150 27 24 chr5 115907875 115908249 -83721901 + THE1C LTR MaLR 1 375 0 442 273 131 33 chr5 115908404 115908587 -83721563 + MER46C DNA MER2_type 135 335 -3 1306 263 16 11 chr5 115908744 115909189 -83720961 - L1M4c LINE L1 -4854 2105 1659 864 169 0 0 chr5 115909236 115909372 -83720778 - Tigger3(Golem) DNA MER2_type -2 3027 2892 356 219 55 0 chr5 115909375 115909448 -83720702 - Tigger3(Golem) DNA MER2_type -2952 77 1 211 216 0 0 chr5 115909449 115909486 -83720664 + (TATATG)n Simple_repeat Simple_repeat 1 37 0 240 133 0 0 chr5 115909486 115909531 -83720619 - LTR66 LTR ERVL -172 438 394 222 267 0 17 chr5 115909544 115909604 -83720546 + (TA)n Simple_repeat Simple_repeat 2 60 0 2948 247 45 11 chr5 115909618 115910862 -83719288 - L1M4c LINE L1 -5255 1604 203 420 291 35 29 chr5 115911638 115911810 -83718340 + MER20B DNA MER1_type 2 174 -609 213 154 0 0 chr5 115911944 115911983 -83718167 + (TG)n Simple_repeat Simple_repeat 2 40 0 1894 196 48 90 chr5 115912510 115913076 -83717074 - MLT1F LTR MaLR 0 542 1 1514 235 0 3 chr5 115913164 115913530 -83716620 - L1M4 LINE L1 -2362 3784 3420 418 308 65 76 chr5 115914500 115914883 -83715267 + L2 LINE L2 2136 2514 -800 187 340 0 0 chr5 115915077 115915130 -83715020 - L2 LINE L2 0 3313 3261 308 282 58 19 chr5 115915475 115915631 -83714519 + MER103 DNA DNA 3 164 -2 288 0 0 0 chr5 115916393 115916425 -83713725 + (CA)n Simple_repeat Simple_repeat 1 32 0 26 0 0 0 chr5 115916477 115916503 -83713647 + AT_rich Low_complexity Low_complexity 1 26 0 2236 92 3 0 chr5 115917616 115917908 -83712242 + AluSg SINE Alu 1 293 -17 251 217 43 0 chr5 115918501 115918593 -83711557 + (TA)n Simple_repeat Simple_repeat 2 97 0 24 32 0 0 chr5 115918769 115918800 -83711350 + AT_rich Low_complexity Low_complexity 1 31 0 22 70 0 0 chr5 115918972 115919015 -83711135 + AT_rich Low_complexity Low_complexity 1 43 0 2321 103 0 0 chr5 115919160 115919472 -83710678 - AluSq SINE Alu -1 312 1 2638 99 3 0 chr5 115920769 115921123 -83709027 - THE1A LTR MaLR 0 355 1 11033 104 20 0 chr5 115921123 115922672 -83707478 - THE1A-int LTR MaLR 0 1580 1 2707 82 3 0 chr5 115922672 115923026 -83707124 - THE1A LTR MaLR 0 355 1 5666 106 16 25 chr5 115923163 115924131 -83706019 + L1PA13 LINE L1 5190 6148 -15 800 142 31 0 chr5 115925197 115925324 -83704826 + FLAM_C SINE Alu 1 131 -12 289 250 29 0 chr5 115925338 115925406 -83704744 + L2 LINE L2 3240 3309 -4 1901 234 83 39 chr5 115925864 115926381 -83703769 + MLT1F1 LTR MaLR 28 567 0 997 270 165 29 chr5 115926976 115927542 -83702608 + L2 LINE L2 2660 3313 0 29 28 0 0 chr5 115927552 115927588 -83702562 + AT_rich Low_complexity Low_complexity 1 36 0 288 254 53 44 chr5 115927705 115927819 -83702331 - L1ME LINE L1 -497 5624 5510 376 107 36 60 chr5 115928222 115928306 -83701844 + L1MA2 LINE L1 6223 6304 0 314 221 158 11 chr5 115930107 115930202 -83699948 + MIR SINE MIR 45 153 -109 2505 37 0 3 chr5 115930961 115931259 -83698891 + AluY SINE Alu 1 297 -14 789 313 57 6 chr5 115931898 115932214 -83697936 + MER102b DNA MER1_type 1 332 -9 25 0 0 0 chr5 115932234 115932259 -83697891 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 115932538 115932559 -83697591 + AT_rich Low_complexity Low_complexity 1 21 0 3876 206 92 72 chr5 115934187 115935597 -83694553 - Charlie1a DNA MER1_type -5 1450 13 2417 64 0 3 chr5 115935618 115935916 -83694234 - AluY SINE Alu -11 300 4 21 57 0 0 chr5 115936160 115936195 -83693955 + AT_rich Low_complexity Low_complexity 1 35 0 750 285 107 4 chr5 115937433 115937696 -83692454 + L1MC4a LINE L1 5576 5865 -1943 196 360 59 42 chr5 115938001 115938290 -83691860 - L2 LINE L2 -739 2575 2282 766 142 13 77 chr5 115938678 115938833 -83691317 - L1PA16 LINE L1 -21 6145 6001 25 31 0 0 chr5 115938834 115938866 -83691284 + AT_rich Low_complexity Low_complexity 1 32 0 29 0 0 0 chr5 115938913 115938942 -83691208 + AT_rich Low_complexity Low_complexity 1 29 0 311 342 94 42 chr5 115939359 115939838 -83690312 - L2 LINE L2 -686 2628 2125 2052 153 3 12 chr5 115940797 115941143 -83689007 + MER2 DNA MER2_type 1 343 -1 233 321 0 12 chr5 115941146 115941230 -83688920 + MIR SINE MIR 32 114 -148 420 336 23 16 chr5 115941474 115941602 -83688548 - L2 LINE L2 0 3272 3144 667 325 150 16 chr5 115941773 115942226 -83687924 - L2 LINE L2 -371 2943 2430 361 301 108 73 chr5 115943026 115943714 -83686436 - L2 LINE L2 -905 2409 1698 21 0 0 0 chr5 115943878 115943899 -83686251 + AT_rich Low_complexity Low_complexity 1 21 0 300 255 0 0 chr5 115944713 115944815 -83685335 + T-rich Low_complexity Low_complexity 1 102 0 256 100 20 20 chr5 115944918 115944968 -83685182 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 210 338 14 50 chr5 115945027 115945166 -83684984 + MIR SINE MIR 59 192 -70 514 296 128 1 chr5 115945169 115945365 -83684785 + MIR SINE MIR 19 243 -19 25 0 0 0 chr5 115946639 115946664 -83683486 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 115947269 115947292 -83682858 + AT_rich Low_complexity Low_complexity 1 23 0 206 270 183 24 chr5 115948281 115948407 -83681743 + MIR SINE MIR 65 210 -52 1887 120 8 0 chr5 115948946 115949212 -83680938 + AluSg SINE Alu 43 310 0 1057 268 89 61 chr5 115949441 115949867 -83680283 - L2 LINE L2 -14 3299 2862 948 264 23 68 chr5 115949896 115950249 -83679901 - L2 LINE L2 -357 2957 2621 240 174 0 0 chr5 115950269 115950315 -83679835 + L2 LINE L2 2199 2244 -1070 366 229 0 0 chr5 115950321 115950391 -83679759 - Tigger5 DNA MER2_type -4 2319 2250 294 211 0 0 chr5 115950362 115950414 -83679736 - Tigger5 DNA MER2_type -2271 52 1 * 1421 274 137 11 chr5 115950455 115950980 -83679170 + L2 LINE L2 2306 2896 -418 571 245 135 36 chr5 115951074 115951266 -83678884 - MIR SINE MIR 0 262 52 558 250 75 40 chr5 115955874 115956126 -83674024 + L1MC4a LINE L1 2 262 -6280 1186 248 56 13 chr5 115956184 115956750 -83673400 + L1MC4a LINE L1 1818 2498 -4148 732 128 17 17 chr5 115956764 115956905 -83673245 + AluSp/q SINE Alu 170 310 0 553 194 175 23 chr5 115956905 115957210 -83672940 + L1MC4a LINE L1 2510 2866 -3778 431 269 70 47 chr5 115957640 115957811 -83672339 - MIR3 SINE MIR -31 177 3 252 208 255 28 chr5 115958581 115958687 -83671463 + MIR SINE MIR 20 149 -113 185 353 24 24 chr5 115959170 115959255 -83670895 - L2 LINE L2 -2 3311 3227 436 239 22 65 chr5 115959424 115959562 -83670588 - MIR SINE MIR 0 262 131 21 82 0 0 chr5 115959572 115959621 -83670529 + AT_rich Low_complexity Low_complexity 1 49 0 4849 193 52 23 chr5 115960706 115961808 -83668342 + L1MC2 LINE L1 5200 6336 -8 1885 219 86 69 chr5 115961836 115962591 -83667559 - L1MC4a LINE L1 -79 7729 6962 336 318 74 41 chr5 115962618 115963103 -83667047 + L1MC4a LINE L1 2916 3416 -3228 233 262 16 0 chr5 115963118 115963179 -83666971 + L1P LINE L1 2956 3017 -3129 32 26 0 0 chr5 115963179 115963218 -83666932 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 115963456 115963478 -83666672 + AT_rich Low_complexity Low_complexity 1 22 0 1588 258 52 24 chr5 115963579 115964175 -83665975 + L1MC4a LINE L1 5752 6364 -1942 453 233 17 43 chr5 115964614 115964730 -83665420 - L2 LINE L2 -8 3305 3193 1860 177 10 65 chr5 115964809 115965222 -83664928 - MLT1B LTR MaLR 0 390 1 24709 30 0 1 chr5 115965311 115969428 -83660722 + L1PA2 LINE L1 2042 6155 0 4339 87 7 0 chr5 115969455 115970419 -83659731 - L1PA6 LINE L1 -307 5847 4880 * 6891 104 2 1 chr5 115970414 115971410 -83658740 - L1PA6 LINE L1 -3364 2782 1786 1253 89 11 0 chr5 115971401 115971580 -83658570 + L1PA6 LINE L1 1597 1777 -4369 * 293 310 117 38 chr5 115971900 115972113 -83658037 + L2 LINE L2 3084 3313 0 1523 229 34 99 chr5 115972372 115972965 -83657185 + MLT2B3 LTR ERVL 1 554 0 2066 129 111 20 chr5 115972980 115973376 -83656774 - MSTB1 LTR MaLR 0 432 1 182 376 28 18 chr5 115973482 115973591 -83656559 + MIR SINE MIR 20 129 -133 23 55 0 18 chr5 115973591 115973613 -83656537 + AT_rich Low_complexity Low_complexity 1 22 -32 7179 45 6 3 chr5 115973613 115975025 -83655125 - L1PA4 LINE L1 -3 6152 4742 23 55 0 18 chr5 115975025 115975057 -83655093 + AT_rich Low_complexity Low_complexity 22 54 0 410 295 52 52 chr5 115977149 115977417 -83652733 + L1MC/D LINE L1 5417 5684 -2124 206 105 26 0 chr5 115977629 115977667 -83652483 + (TA)n Simple_repeat Simple_repeat 2 40 0 2466 163 7 77 chr5 115978087 115978647 -83651503 - Tigger3(Golem) DNA MER2_type 0 3029 2509 6605 66 12 0 chr5 115978647 115979398 -83650752 - L1PA7 LINE L1 -5 6149 5409 2288 86 3 3 chr5 115979398 115979689 -83650461 - AluY SINE Alu -18 293 3 6605 66 12 0 chr5 115979689 115980575 -83649575 - L1PA7 LINE L1 -745 5409 4504 5306 83 6 0 chr5 115980575 115981300 -83648850 + L1PA7 LINE L1 3765 4493 -1653 1075 91 76 5 chr5 115981300 115981497 -83648653 - Tigger3(Golem) DNA MER2_type -509 2520 2310 5036 129 14 0 chr5 115981974 115982742 -83647408 - L1PA16 LINE L1 -2 6867 6089 8340 199 74 30 chr5 115982877 115987878 -83642272 - L1PB1 LINE L1 -3 6864 1308 3210 207 123 8 chr5 115987889 115988691 -83641459 - L1PB1 LINE L1 -5708 1155 261 9201 225 28 19 chr5 115988692 115990900 -83639250 - L1PA16 LINE L1 -751 6098 3866 2346 127 8 22 chr5 115990900 115991269 -83638881 - THE1B LTR MaLR 0 364 1 9201 225 28 19 chr5 115991269 115991477 -83638673 - L1PA16 LINE L1 -2983 3866 3661 2101 163 74 17 chr5 115991477 115991549 -83638601 + MSTA LTR MaLR 1 67 -361 2396 123 3 38 chr5 115991549 115991940 -83638210 + MER51B LTR ERV1 1 377 0 2101 163 74 17 chr5 115991940 115992272 -83637878 + MSTA LTR MaLR 67 428 0 10258 187 27 51 chr5 115992272 115995017 -83635133 - L1PA16 LINE L1 -3184 3665 959 1235 263 52 36 chr5 115995115 115995499 -83634651 + MLT1F1 LTR MaLR 177 566 -1 201 383 18 30 chr5 115995664 115995678 -83634472 - MIR3 SINE MIR -41 167 154 2402 83 0 0 chr5 115995678 115995978 -83634172 + AluY SINE Alu 2 301 -10 201 383 18 30 chr5 115995978 115996130 -83634020 - MIR3 SINE MIR -54 154 3 22 35 0 0 chr5 115996275 115996304 -83633846 + AT_rich Low_complexity Low_complexity 1 29 0 492 361 70 0 chr5 115996924 115997154 -83632996 + MIR SINE MIR 17 262 0 202 231 0 15 chr5 115997888 115997953 -83632197 + (TA)n Simple_repeat Simple_repeat 2 65 0 244 325 0 12 chr5 115998668 115998751 -83631399 + MLT1K LTR MaLR 40 121 -467 230 245 0 0 chr5 115998959 115999012 -83631138 + (TG)n Simple_repeat Simple_repeat 2 54 0 247 24 0 48 chr5 115999115 115999157 -83630993 + (TTA)n Simple_repeat Simple_repeat 1 40 0 234 200 0 0 chr5 115999563 115999608 -83630542 + L1MC4 LINE L1 6658 6702 -1340 227 218 0 0 chr5 115999574 115999629 -83630521 - L1MC4 LINE L1 -1340 6702 6648 * 384 256 8 48 chr5 116000380 116000505 -83629645 - L2 LINE L2 -67 3246 3127 459 309 67 43 chr5 116001229 116001604 -83628546 + L1M4 LINE L1 2169 2552 -3594 251 287 81 74 chr5 116002202 116002460 -83627690 + L1M4 LINE L1 237 496 -5784 569 274 8 37 chr5 116002484 116002729 -83627421 + L1M4 LINE L1 595 832 -5448 * 5426 136 25 11 chr5 116002721 116003654 -83626496 + L1PA16 LINE L1 5219 6165 -1 2732 195 35 26 chr5 116003674 116004425 -83625725 + L1M4 LINE L1 1259 2092 -4292 1344 306 72 18 chr5 116004419 116004916 -83625234 - L1M4b LINE L1 -5945 914 391 * 987 234 54 29 chr5 116005165 116005649 -83624501 + L1M1 LINE L1 3420 3897 -3668 993 183 0 6 chr5 116005674 116005849 -83624301 - AluJb SINE Alu -17 295 122 1326 249 68 14 chr5 116005849 116006363 -83623787 + L1MD2 LINE L1 4861 5402 -744 477 259 83 96 chr5 116006357 116006670 -83623480 + L1MD2 LINE L1 5927 6235 -124 * 21 57 0 0 chr5 116006685 116006720 -83623430 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 116007130 116007153 -83622997 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 116007153 116007174 -83622976 + (CA)n Simple_repeat Simple_repeat 2 22 0 24 0 0 0 chr5 116009415 116009439 -83620711 + AT_rich Low_complexity Low_complexity 1 24 0 723 157 0 8 chr5 116009439 116009573 -83620577 - L1MA7 LINE L1 -7 6284 6152 305 291 70 54 chr5 116009620 116009878 -83620272 - HAL1 LINE L1 -2237 270 9 204 333 115 18 chr5 116012155 116012320 -83617830 - L2 LINE L2 -1219 2095 1915 21 36 0 0 chr5 116012605 116012633 -83617517 + AT_rich Low_complexity Low_complexity 1 28 0 36 23 0 0 chr5 116013020 116013063 -83617087 + AT_rich Low_complexity Low_complexity 1 43 0 2324 212 29 21 chr5 116014145 116014775 -83615375 + LTR27 LTR ERV1 11 706 -141 243 207 121 0 chr5 116014752 116014810 -83615340 + LTR27 LTR ERV1 570 634 -2 * 511 230 164 49 chr5 116014815 116015041 -83615109 + LTR27-int LTR ERV1 1 252 -6839 738 121 0 0 chr5 116015044 116015160 -83614990 + (TTCC)n Simple_repeat Simple_repeat 4 119 0 905 211 0 6 chr5 116015183 116015358 -83614792 - AluSg/x SINE Alu -2 308 135 4591 182 79 52 chr5 116015364 116016388 -83613762 + LTR27-int LTR ERV1 406 1457 -5634 509 133 0 39 chr5 116016393 116016502 -83613648 + LTR27-int LTR ERV1 2174 4763 -454 385 173 27 13 chr5 116016514 116016589 -83613561 + LTR27-int LTR ERV1 3919 3994 -886 14244 152 48 46 chr5 116016615 116018487 -83611663 + LTR27-int LTR ERV1 632 2498 -4498 1954 141 0 10 chr5 116018487 116018777 -83611373 + AluSx SINE Alu 1 287 -25 14244 152 48 46 chr5 116018777 116021280 -83608870 + LTR27-int LTR ERV1 2498 6995 -1 2294 199 44 26 chr5 116021281 116021913 -83608237 + LTR27 LTR ERV1 3 706 -134 2816 184 93 24 chr5 116022914 116023594 -83606556 + LTR8A LTR ERV1 1 727 0 367 386 51 0 chr5 116023820 116023996 -83606154 + L2 LINE L2 725 909 -2405 399 246 217 22 chr5 116024028 116024166 -83605984 + MIR SINE MIR 7 171 -91 333 291 19 0 chr5 116024190 116024293 -83605857 - MIR SINE MIR -6 256 152 849 317 85 61 chr5 116024680 116025343 -83604807 + L2 LINE L2 1528 2217 -1097 2956 171 74 7 chr5 116025343 116025910 -83604240 + MER6A DNA MER2_type 1 605 0 849 317 85 61 chr5 116025910 116026094 -83604056 + L2 LINE L2 2217 2395 -919 4151 27 0 0 chr5 116026135 116026616 -83603534 + L1PA4 LINE L1 5413 5893 -262 207 100 0 0 chr5 116026644 116026674 -83603476 + (TTTTC)n Simple_repeat Simple_repeat 3 32 0 1920 193 30 21 chr5 116026731 116027319 -83602831 - L1MCb LINE L1 -4863 1182 745 889 204 0 6 chr5 116027319 116027486 -83602664 + AluJb SINE Alu 1 166 -146 1064 240 38 38 chr5 116027488 116027805 -83602345 - PABL_B LTR ERV1 -2 665 349 380 317 24 29 chr5 116027813 116028021 -83602129 - PABL_B LTR ERV1 -460 207 1 497 195 0 0 chr5 116028027 116028109 -83602041 + AluJb SINE Alu 181 262 -50 30 27 0 0 chr5 116028135 116028172 -83601978 + AT_rich Low_complexity Low_complexity 1 37 0 2764 227 24 80 chr5 116028239 116029019 -83601131 - L1MCb LINE L1 -5667 897 161 2102 175 36 31 chr5 116029088 116029638 -83600512 - MLT2A2 LTR ERVL 0 554 1 218 264 19 0 chr5 116030571 116030624 -83599526 + CT-rich Low_complexity Low_complexity 2 55 0 889 278 53 76 chr5 116030628 116031157 -83598993 - L1ME3 LINE L1 -24 6138 5622 2246 303 63 38 chr5 116031158 116032024 -83598126 + MER45C DNA AcHobo 1 888 -65 775 274 14 49 chr5 116032074 116032418 -83597732 - L1M1 LINE L1 -542 5628 5290 * 1036 268 106 11 chr5 116032405 116032867 -83597283 - L1ME3 LINE L1 -1197 4949 4444 240 59 0 0 chr5 116033246 116033280 -83596870 + (CA)n Simple_repeat Simple_repeat 1 34 0 915 197 101 107 chr5 116033619 116033964 -83596186 - MER2 DNA MER2_type 0 345 3 394 304 32 8 chr5 116033971 116034096 -83596054 - MIR SINE MIR -26 236 109 1806 162 36 7 chr5 116034230 116034532 -83595618 - AluJb SINE Alu -1 311 1 1571 181 120 3 chr5 116035493 116035842 -83594308 + MLT1B LTR MaLR 1 390 0 1149 270 76 12 chr5 116037122 116037649 -83592501 + L1ME LINE L1 5188 5753 -409 243 0 0 0 chr5 116037814 116037841 -83592309 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 319 284 62 52 chr5 116038706 116039043 -83591107 - L1ME LINE L1 -545 5617 5292 735 286 59 13 chr5 116039059 116039297 -83590853 + MIR SINE MIR 2 250 -12 31 26 0 0 chr5 116039399 116039437 -83590713 + AT_rich Low_complexity Low_complexity 1 38 0 2140 179 48 5 chr5 116039841 116040282 -83589868 + L1MC3 LINE L1 7326 7785 0 360 308 13 63 chr5 116040355 116040514 -83589636 - L2 LINE L2 0 3272 3122 229 344 11 0 chr5 116040665 116040755 -83589395 + GA-rich Low_complexity Low_complexity 2 92 0 391 347 54 21 chr5 116040755 116041089 -83589061 - L2 LINE L2 -412 2902 2558 249 108 0 0 chr5 116041602 116041639 -83588511 + (CA)n Simple_repeat Simple_repeat 1 37 0 25 0 0 0 chr5 116042241 116042266 -83587884 + AT_rich Low_complexity Low_complexity 1 25 0 313 352 70 0 chr5 116042370 116042498 -83587652 - L2 LINE L2 0 3272 3136 225 364 128 5 chr5 116042553 116042750 -83587400 + MIR SINE MIR 34 258 -4 272 341 114 39 chr5 116042956 116043393 -83586757 - L2 LINE L2 -793 2521 2052 24246 36 4 4 chr5 116043574 116046583 -83583567 - L1P LINE L1 -1095 5051 2042 10053 185 56 111 chr5 116046751 116047829 -83582321 - L1PA15-16 LINE L1 -1903 4946 3810 2346 127 8 22 chr5 116047829 116048198 -83581952 - THE1B LTR MaLR 0 364 1 10053 185 56 111 chr5 116048198 116048406 -83581744 - L1PA15-16 LINE L1 -3039 3810 3592 2101 163 74 17 chr5 116048406 116048478 -83581672 + MSTA LTR MaLR 1 67 -361 2418 120 3 38 chr5 116048478 116048869 -83581281 + MER51B LTR ERV1 1 377 0 2101 163 74 17 chr5 116048869 116049201 -83580949 + MSTA LTR MaLR 67 428 0 10053 185 56 111 chr5 116049201 116051924 -83578226 - L1PA15-16 LINE L1 -3257 3592 847 1235 263 52 36 chr5 116052023 116052407 -83577743 + MLT1F1 LTR MaLR 177 566 -1 201 383 18 30 chr5 116052572 116052586 -83577564 - MIR3 SINE MIR -41 167 154 2458 77 0 0 chr5 116052586 116052886 -83577264 + AluY SINE Alu 2 301 -10 201 383 18 30 chr5 116052886 116053038 -83577112 - MIR3 SINE MIR -54 154 3 22 35 0 0 chr5 116053183 116053212 -83576938 + AT_rich Low_complexity Low_complexity 1 29 0 492 361 70 0 chr5 116053832 116054062 -83576088 + MIR SINE MIR 17 262 0 202 231 0 15 chr5 116054798 116054863 -83575287 + (TA)n Simple_repeat Simple_repeat 2 65 0 244 325 0 12 chr5 116055578 116055661 -83574489 + MLT1K LTR MaLR 40 121 -467 230 245 0 0 chr5 116055869 116055922 -83574228 + (TG)n Simple_repeat Simple_repeat 2 54 0 225 292 131 29 chr5 116055924 116056018 -83574132 + MLT1K LTR MaLR 419 533 -55 360 0 0 0 chr5 116056018 116056058 -83574092 + (TTA)n Simple_repeat Simple_repeat 1 40 0 225 292 131 29 chr5 116056058 116056100 -83574050 + MLT1K LTR MaLR 533 569 -19 234 200 0 0 chr5 116056466 116056511 -83573639 + L1MC4 LINE L1 6658 6702 -1340 227 218 0 0 chr5 116056477 116056532 -83573618 - L1MC4 LINE L1 -1340 6702 6648 * 384 256 8 48 chr5 116057252 116057377 -83572773 - L2 LINE L2 -67 3246 3127 452 299 72 48 chr5 116058101 116058476 -83571674 + L1M4 LINE L1 2169 2552 -3594 232 167 0 56 chr5 116058517 116058571 -83571579 + L1M4 LINE L1 72 122 -6420 692 214 7 0 chr5 116058780 116058925 -83571225 + MLT1B LTR MaLR 160 305 -85 24 32 0 0 chr5 116060107 116060138 -83570012 + AT_rich Low_complexity Low_complexity 1 31 0 412 304 29 0 chr5 116060138 116060276 -83569874 - L2 LINE L2 -5 3308 3167 301 274 45 44 chr5 116060324 116060537 -83569613 + L1ME4a LINE L1 5674 5891 -230 1111 258 30 12 chr5 116060901 116061238 -83568912 - L1ME2 LINE L1 -62 6102 5760 12797 168 21 12 chr5 116061373 116064284 -83565866 - L1MA2 LINE L1 -83 6221 3278 1838 85 0 12 chr5 116064284 116064531 -83565619 - AluY SINE Alu -3 308 65 12797 168 21 12 chr5 116064531 116065196 -83564954 - L1MA2 LINE L1 -3026 3278 2621 2479 210 12 10 chr5 116065231 116065712 -83564438 - L1MCa LINE L1 -5938 488 7 982 204 96 4 chr5 116065695 116065925 -83564225 + MLT1B-int LTR MaLR 1120 1370 -1 * 1712 170 38 51 chr5 116065926 116066321 -83563829 + MLT1B LTR MaLR 1 390 0 582 326 67 19 chr5 116066538 116066808 -83563342 - L1MEc LINE L1 -6080 316 34 391 287 177 6 chr5 116067240 116067421 -83562729 + MIR SINE MIR 38 249 -13 203 247 0 24 chr5 116067921 116068006 -83562144 + GA-rich Low_complexity Low_complexity 2 84 0 206 283 175 16 chr5 116068103 116068231 -83561919 - MIR SINE MIR -62 146 36 1048 313 44 7 chr5 116068273 116068685 -83561465 - LTR16A LTR ERVL -6 444 18 291 36 18 36 chr5 116069320 116069375 -83560775 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 2193 130 0 3 chr5 116069377 116069676 -83560474 - AluSq SINE Alu -15 298 1 24 0 0 0 chr5 116070064 116070088 -83560062 + AT_rich Low_complexity Low_complexity 1 24 0 2238 66 0 24 chr5 116070847 116071136 -83559014 - AluSg SINE Alu -28 282 1 700 320 202 8 chr5 116071460 116072036 -83558114 - L2 LINE L2 -4 3309 2607 23 0 0 0 chr5 116072235 116072258 -83557892 + AT_rich Low_complexity Low_complexity 1 23 0 779 174 0 0 chr5 116072262 116072383 -83557767 + FLAM_C SINE Alu 4 124 -19 22 35 0 0 chr5 116074181 116074210 -83555940 + AT_rich Low_complexity Low_complexity 1 29 0 1425 60 0 11 chr5 116075096 116075279 -83554871 - L1PA6 LINE L1 -8 6146 5966 242 309 27 9 chr5 116075678 116075788 -83554362 + L1MC/D LINE L1 5630 5741 -501 1517 252 102 36 chr5 116075801 116076381 -83553769 - L2 LINE L2 -734 2580 1963 2089 116 3 7 chr5 116076389 116076683 -83553467 + AluSg SINE Alu 1 293 -17 12774 33 3 1 chr5 116077201 116079365 -83550785 - L1PA4 LINE L1 -222 5933 3765 6531 66 17 12 chr5 116079365 116080251 -83549899 + L1PA7 LINE L1 4504 5401 -753 2302 82 3 3 chr5 116080251 116080542 -83549608 + AluY SINE Alu 3 293 -18 6531 66 17 12 chr5 116080542 116081295 -83548855 + L1PA7 LINE L1 5401 6149 -5 1209 157 11 167 chr5 116081295 116081912 -83548238 + Tigger3(Golem) DNA MER2_type 2509 3029 0 769 308 106 46 chr5 116082252 116082865 -83547285 + L2 LINE L2 1559 2208 -1106 182 349 18 46 chr5 116082966 116083075 -83547075 + MIR SINE MIR 35 140 -122 39 50 0 0 chr5 116083158 116083218 -83546932 + AT_rich Low_complexity Low_complexity 1 60 0 753 178 0 23 chr5 116083413 116083542 -83546608 - FRAM SINE Alu -23 153 28 238 279 112 45 chr5 116083588 116083767 -83546383 - MLT1J2 LTR MaLR -167 283 93 339 315 55 0 chr5 116084501 116084701 -83545449 - HAL1 LINE L1 -802 1705 1495 1102 235 202 83 chr5 116085236 116085938 -83544212 - LTR50 LTR ERVL -2 793 8 2502 52 0 0 chr5 116086425 116086730 -83543420 + AluY SINE Alu 1 305 -6 797 267 14 18 chr5 116087812 116088029 -83542121 + MIR SINE MIR 41 256 -6 23 54 0 0 chr5 116089534 116089571 -83540579 + AT_rich Low_complexity Low_complexity 1 37 0 264 174 0 0 chr5 116090942 116090988 -83539162 + L1MC4 LINE L1 7856 7901 -141 665 321 28 0 chr5 116091131 116091418 -83538732 - L1MEc LINE L1 -2588 3627 3333 295 307 74 43 chr5 116091422 116091585 -83538565 - MLT2E LTR ERVL -7 621 454 199 122 41 20 chr5 116091769 116091818 -83538332 + T-rich Low_complexity Low_complexity 2 51 0 2610 317 73 15 chr5 116093514 116094820 -83535330 + ERVL LTR ERVL 3901 5282 -482 364 285 76 6 chr5 116094853 116095025 -83535125 - L1MEc LINE L1 -4738 1658 1475 528 68 11 23 chr5 116095037 116095125 -83535025 + (TTCC)n Simple_repeat Simple_repeat 1 87 0 243 196 0 77 chr5 116095161 116095304 -83534846 + CT-rich Low_complexity Low_complexity 3 134 0 * 388 227 35 47 chr5 116095225 116095397 -83534753 + (CCCTA)n Simple_repeat Simple_repeat 4 173 0 250 177 0 16 chr5 116095369 116095431 -83534719 + (CATAC)n Simple_repeat Simple_repeat 4 64 0 * 13179 93 20 18 chr5 116095763 116097933 -83532217 + MER57-int LTR ERV1 3338 5512 -2025 2995 53 2 21 chr5 116098036 116098472 -83531678 - L1P LINE L1 -1652 4494 4067 23360 42 1 4 chr5 116098472 116102186 -83527964 + L1PA5 LINE L1 2445 6154 0 813 196 12 12 chr5 116102714 116102877 -83527273 - FRAM SINE Alu -12 164 2 281 262 183 0 chr5 116103776 116103902 -83526248 - L1MD2 LINE L1 -17 6342 6194 215 31 31 0 chr5 116103920 116103952 -83526198 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1277 175 24 0 chr5 116104705 116104951 -83525199 - Tigger2 DNA MER2_type -3 2715 2464 213 333 0 0 chr5 116105111 116105177 -83524973 + CT-rich Low_complexity Low_complexity 1 66 0 251 318 48 16 chr5 116106358 116106484 -83523666 - L2 LINE L2 -2577 737 608 2235 108 3 3 chr5 116107753 116108050 -83522100 + AluSq SINE Alu 3 299 -14 1485 224 23 12 chr5 116108690 116109033 -83521117 - MLT1A1 LTR MaLR -2 363 17 2909 209 29 13 chr5 116109036 116109668 -83520482 + MLT1A1-int LTR MaLR 1092 1733 -2 1681 184 25 31 chr5 116109683 116110036 -83520114 + MLT1A1 LTR MaLR 11 361 -4 274 332 142 54 chr5 116110125 116110330 -83519820 - L2 LINE L2 -5 3267 3045 921 252 37 4 chr5 116110596 116110842 -83519308 - MIR SINE MIR 0 262 9 2185 65 55 3 chr5 116112120 116112410 -83517740 + AluY SINE Alu 1 305 -6 23 0 0 0 chr5 116112443 116112466 -83517684 + AT_rich Low_complexity Low_complexity 1 23 0 304 198 37 56 chr5 116113626 116113788 -83516362 + (CACAA)n Simple_repeat Simple_repeat 5 163 0 228 186 62 47 chr5 116113861 116113990 -83516160 + (CACAA)n Simple_repeat Simple_repeat 5 135 0 744 153 160 0 chr5 116116613 116116757 -83513393 + MSTA LTR MaLR 262 428 0 1338 97 32 0 chr5 116116759 116116975 -83513175 - L1MB3 LINE L1 -193 5990 5768 4000 238 60 18 chr5 116117476 116118902 -83511248 - L1M4 LINE L1 -1262 4884 3400 917 184 75 13 chr5 116118906 116119211 -83510939 - L1M4 LINE L1 -3062 3084 2761 235 243 36 18 chr5 116119471 116119582 -83510568 - L1ME LINE L1 -282 5839 5727 9019 104 24 0 chr5 116120153 116121410 -83508740 + HSMAR1 DNA Mariner 1 1287 0 945 197 54 118 chr5 116122235 116122625 -83507525 - MLT1A1 LTR MaLR 0 365 1 226 204 0 0 chr5 116123007 116123051 -83507099 + MIR SINE MIR 71 114 -148 307 254 148 48 chr5 116123054 116123243 -83506907 - MER63A DNA MER1_type 0 210 3 278 313 99 74 chr5 116123316 116123719 -83506431 - LTR67 LTR ERVL -31 526 114 * 641 227 11 51 chr5 116123659 116123835 -83506315 - MLT1J LTR MaLR -342 169 1 380 213 0 0 chr5 116123992 116124067 -83506083 - AluJ/FLAM SINE Alu -226 76 2 1899 159 30 70 chr5 116124068 116124177 -83505973 + MLT1C LTR MaLR 82 194 -273 1979 116 4 0 chr5 116124177 116124444 -83505706 + AluSc SINE Alu 9 276 -33 198 0 0 0 chr5 116124444 116124466 -83505684 + (CA)n Simple_repeat Simple_repeat 1 22 0 1899 159 30 70 chr5 116124466 116124757 -83505393 + MLT1C LTR MaLR 192 467 0 280 271 42 8 chr5 116125392 116125510 -83504640 - LTR67 LTR ERVL 0 557 436 280 277 88 31 chr5 116125683 116125842 -83504308 - MLT1J LTR MaLR -325 186 19 633 321 19 5 chr5 116126327 116126539 -83503611 - MER58A DNA MER1_type 0 224 10 462 259 137 10 chr5 116127003 116127168 -83502982 + MIR SINE MIR 1 164 -62 212 137 20 0 chr5 116127296 116127347 -83502803 + (TA)n Simple_repeat Simple_repeat 2 53 0 2151 129 0 7 chr5 116127604 116127906 -83502244 - AluSx SINE Alu -12 300 1 431 368 27 8 chr5 116128179 116128440 -83501710 - MLT1K LTR MaLR -319 269 4 2106 131 0 3 chr5 116128537 116128849 -83501301 + AluSx SINE Alu 1 311 -1 4195 157 85 53 chr5 116129091 116129965 -83500185 - MER21A LTR ERV1 -29 902 1 304 290 114 8 chr5 116130533 116130664 -83499486 - L1MEc LINE L1 -6191 205 61 366 282 92 90 chr5 116130832 116131178 -83498972 - L1M4 LINE L1 -2607 3539 3190 573 120 43 43 chr5 116131178 116131295 -83498855 - L1PA8 LINE L1 -6 6166 6050 366 282 92 90 chr5 116131295 116131405 -83498745 - L1M4 LINE L1 -2956 3190 3082 343 174 58 0 chr5 116131405 116131474 -83498676 - L1ME3 LINE L1 -1 6161 6089 204 67 0 0 chr5 116131566 116131596 -83498554 + (T)n Simple_repeat Simple_repeat 1 30 0 1061 138 50 22 chr5 116131610 116131791 -83498359 - AluJb SINE Alu -126 186 1 454 200 60 0 chr5 116131838 116131938 -83498212 - MER5A DNA MER1_type -80 109 4 219 235 0 39 chr5 116132048 116132099 -83498051 + L2 LINE L2 3219 3267 -5 46 0 0 0 chr5 116132166 116132212 -83497938 + AT_rich Low_complexity Low_complexity 1 46 0 320 219 175 44 chr5 116132609 116132723 -83497427 + MIR SINE MIR 121 249 -13 250 348 161 0 chr5 116133219 116133374 -83496776 + MIR SINE MIR 11 190 -72 29 47 0 0 chr5 116133544 116133587 -83496563 + AT_rich Low_complexity Low_complexity 1 43 0 267 93 0 0 chr5 116134018 116134061 -83496089 + (CA)n Simple_repeat Simple_repeat 2 44 0 586 243 8 9 chr5 116135490 116135630 -83494520 + MIR SINE MIR 19 155 -62 305 180 45 34 chr5 116135766 116135855 -83494295 + MIR SINE MIR 173 262 0 187 250 0 0 chr5 116137265 116137301 -83492849 + L2 LINE L2 3263 3298 -15 214 358 115 42 chr5 116137480 116137645 -83492505 - L2 LINE L2 -51 3221 3045 182 343 0 43 chr5 116137658 116137728 -83492422 - L2 LINE L2 -484 2830 2764 418 263 76 49 chr5 116138816 116139040 -83491110 - L2 LINE L2 -10 3303 3074 206 295 16 0 chr5 116139101 116139162 -83490988 - L2 LINE L2 -334 2938 2877 284 275 176 54 chr5 116139211 116139433 -83490717 - L2 LINE L2 -847 2467 2219 513 256 65 18 chr5 116139516 116139684 -83490466 - MER5B DNA MER1_type -2 176 1 240 248 50 79 chr5 116140243 116140344 -83489806 - MIR3 SINE MIR -104 104 7 2036 110 30 13 chr5 116140963 116141262 -83488888 - AluSg SINE Alu -5 305 2 259 250 0 0 chr5 116141275 116141335 -83488815 + L1ME4a LINE L1 5561 5620 -501 446 278 68 5 chr5 116141466 116141671 -83488479 + L1ME4a LINE L1 5639 5856 -265 277 350 60 17 chr5 116141975 116142092 -83488058 - L2 LINE L2 -211 3061 2940 264 211 179 32 chr5 116142278 116142373 -83487777 - MIR SINE MIR 0 262 154 184 255 20 0 chr5 116142378 116142429 -83487721 - L2 LINE L2 -817 2497 2446 339 287 149 43 chr5 116142783 116143088 -83487062 - L1ME3 LINE L1 -272 5890 5537 567 244 99 76 chr5 116143148 116143535 -83486615 - L1ME3 LINE L1 -690 5431 5018 2292 94 0 0 chr5 116143535 116143833 -83486317 - AluSc SINE Alu -11 298 1 567 244 99 76 chr5 116143833 116144076 -83486074 - L1ME3 LINE L1 -1103 5018 4782 2218 96 3 0 chr5 116144378 116144670 -83485480 - AluSp SINE Alu -20 293 1 2183 138 0 0 chr5 116144683 116144995 -83485155 - AluSx SINE Alu 0 312 1 23 54 0 0 chr5 116145942 116145979 -83484171 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr5 116146973 116146995 -83483155 + AT_rich Low_complexity Low_complexity 1 22 0 1755 152 13 26 chr5 116147480 116147782 -83482368 - AluJb SINE Alu -14 298 1 551 234 0 14 chr5 116149084 116149225 -83480925 - L1MB7 LINE L1 -10 6174 6036 1230 185 91 0 chr5 116149471 116149768 -83480382 - MER33 DNA MER1_type 0 324 1 26 82 0 0 chr5 116151049 116151110 -83479040 + AT_rich Low_complexity Low_complexity 1 61 0 1342 199 120 3 chr5 116151617 116151933 -83478217 + MLT1A1 LTR MaLR 1 353 -12 499 266 85 34 chr5 116151935 116152112 -83478038 + MIR3 SINE MIR 17 202 -6 783 190 21 0 chr5 116155828 116155970 -83474180 - MER58B DNA MER1_type -15 326 182 398 245 9 9 chr5 116156333 116156439 -83473711 + MER119 DNA MER1_type 463 568 -15 2100 93 47 0 chr5 116156576 116156855 -83473295 - AluSq SINE Alu -21 292 1 431 167 0 0 chr5 116159414 116159480 -83470670 + MER3 DNA MER1_type 35 100 -109 * 528 220 143 5 chr5 116159478 116159687 -83470463 + MER3 DNA MER1_type 2375 2612 0 378 0 0 0 chr5 116160639 116160681 -83469469 + (TG)n Simple_repeat Simple_repeat 2 43 0 25 51 0 0 chr5 116161200 116161239 -83468911 + AT_rich Low_complexity Low_complexity 1 39 0 25 83 0 0 chr5 116163772 116163832 -83466318 + AT_rich Low_complexity Low_complexity 1 60 0 216 0 0 0 chr5 116164205 116164229 -83465921 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 218 323 30 3 chr5 116165135 116165209 -83464941 + MIR SINE MIR 24 98 -110 422 306 50 33 chr5 116165324 116165504 -83464646 - MIR SINE MIR -68 194 12 248 322 0 5 chr5 116165518 116165610 -83464540 + MIR3 SINE MIR 96 187 -21 539 288 61 6 chr5 116166417 116166580 -83463570 - MIR SINE MIR -55 207 36 360 0 0 0 chr5 116166892 116166932 -83463218 + (TG)n Simple_repeat Simple_repeat 2 41 0 377 331 81 31 chr5 116166951 116167311 -83462839 - L2 LINE L2 -338 2976 2599 660 258 31 36 chr5 116167486 116167680 -83462470 + MIR3 SINE MIR 8 200 -8 1898 157 10 7 chr5 116168003 116168308 -83461842 + AluJo SINE Alu 1 306 -6 259 205 13 13 chr5 116169038 116169116 -83461034 + (TAA)n Simple_repeat Simple_repeat 3 80 0 186 43 0 0 chr5 116169175 116169198 -83460952 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 2044 110 7 3 chr5 116170605 116170887 -83459263 + AluSg SINE Alu 1 283 -27 462 18 0 0 chr5 116170887 116170942 -83459208 + (CA)n Simple_repeat Simple_repeat 2 56 0 2159 88 18 3 chr5 116171982 116172301 -83457849 - AluY SINE Alu 0 311 1 1611 186 16 47 chr5 116172562 116172943 -83457207 + MLT1A2 LTR MaLR 1 369 -5 2097 100 25 7 chr5 116174987 116175293 -83454857 + AluSx SINE Alu 1 311 0 7970 126 24 3 chr5 116175443 116176717 -83453433 + HSMAR2 DNA Mariner 2 1301 -1 22 80 0 0 chr5 116177865 116177915 -83452235 + AT_rich Low_complexity Low_complexity 1 50 0 306 0 0 0 chr5 116177975 116178009 -83452141 + (TA)n Simple_repeat Simple_repeat 2 35 0 1353 101 0 0 chr5 116178009 116178187 -83451963 - AluSq SINE Alu -2 311 134 2179 121 0 0 chr5 116178187 116178484 -83451666 - AluSg SINE Alu -13 297 1 2565 106 37 5 chr5 116178854 116179210 -83450940 - L1PB1 LINE L1 -2 6865 6493 333 0 0 0 chr5 116179210 116179247 -83450903 + (TG)n Simple_repeat Simple_repeat 1 37 0 2565 106 37 5 chr5 116179247 116179295 -83450855 - L1PB1 LINE L1 -374 6493 6448 9391 188 12 11 chr5 116179303 116181984 -83448166 - L1PB1 LINE L1 -483 6384 3699 448 223 16 33 chr5 116182085 116182206 -83447944 + L3 LINE CR1 1306 1424 -153 6275 116 65 0 chr5 116182600 116183766 -83446384 - L1PB1 LINE L1 -4477 2386 995 250 208 0 28 chr5 116183762 116183834 -83446316 - L1PB1 LINE L1 -6665 198 129 * 319 70 254 0 chr5 116183837 116183908 -83446242 - L1P LINE L1 -780 5371 5283 591 288 35 104 chr5 116184693 116185116 -83445034 - L2 LINE L2 -10 3262 2869 207 0 0 0 chr5 116185345 116185368 -83444782 + (T)n Simple_repeat Simple_repeat 1 23 0 24 0 0 0 chr5 116186247 116186271 -83443879 + AT_rich Low_complexity Low_complexity 1 24 0 1735 130 4 19 chr5 116186657 116186926 -83443224 + AluSx SINE Alu 48 312 0 1216 48 0 48 chr5 116187329 116187495 -83442655 + AluYa5 SINE Alu 150 307 -4 403 278 136 12 chr5 116187770 116187932 -83442218 - L3 LINE CR1 -91 1486 1305 712 255 188 13 chr5 116187967 116188265 -83441885 + L2 LINE L2 2089 2438 -876 851 313 87 40 chr5 116188273 116188724 -83441426 + L2 LINE L2 2836 3307 -6 2382 60 33 0 chr5 116190661 116190962 -83439188 - AluY SINE Alu 0 311 1 661 289 36 5 chr5 116191177 116191371 -83438779 - MIR SINE MIR 0 262 63 202 132 26 0 chr5 116191401 116191439 -83438711 + (CAA)n Simple_repeat Simple_repeat 2 40 0 186 43 0 0 chr5 116192511 116192534 -83437616 + (T)n Simple_repeat Simple_repeat 1 23 0 985 241 92 44 chr5 116193075 116193531 -83436619 + MER74B LTR ERVL 70 547 -75 25 65 0 0 chr5 116194523 116194569 -83435581 + AT_rich Low_complexity Low_complexity 1 46 0 252 315 34 14 chr5 116194973 116195119 -83435031 + L2 LINE L2 2900 3048 -224 1502 203 38 21 chr5 116195269 116195560 -83434590 - AluJo SINE Alu -16 296 1 1517 123 48 4 chr5 116195594 116195821 -83434329 + AluSq SINE Alu 1 237 -76 32 101 0 0 chr5 116195827 116195936 -83434214 + AT_rich Low_complexity Low_complexity 1 109 0 375 312 135 0 chr5 116195975 116196116 -83434034 + MIR3 SINE MIR 43 202 -6 2124 137 0 0 chr5 116196376 116196676 -83433474 - AluSq SINE Alu -13 300 1 1825 140 16 51 chr5 116196831 116197145 -83433005 - AluSx SINE Alu -9 303 1 2160 113 10 7 chr5 116198347 116198656 -83431494 - AluSg SINE Alu 0 310 1 319 214 11 22 chr5 116199760 116199849 -83430301 - MER103 DNA DNA -71 95 8 1810 168 7 3 chr5 116201466 116201763 -83428387 + AluJo SINE Alu 13 310 -2 451 333 88 18 chr5 116201946 116202388 -83427762 - L1ME LINE L1 -338 5783 5311 753 306 47 13 chr5 116202796 116203028 -83427122 - MIR SINE MIR -11 251 12 323 204 57 34 chr5 116203824 116203912 -83426238 + L1MC4 LINE L1 6614 6703 -1339 938 162 24 176 chr5 116204133 116204649 -83425501 - Charlie1b DNA MER1_type -2243 518 125 2018 120 20 10 chr5 116204649 116204948 -83425202 - AluSx SINE Alu -10 302 1 938 162 24 176 chr5 116204948 116205056 -83425094 - Charlie1b DNA MER1_type -2636 125 2 29 0 0 0 chr5 116205877 116205906 -83424244 + AT_rich Low_complexity Low_complexity 1 29 0 317 305 151 33 chr5 116206071 116206252 -83423898 + MIR SINE MIR 59 259 -3 783 318 142 19 chr5 116207214 116207963 -83422187 + L2 LINE L2 1917 2757 -557 803 223 45 32 chr5 116208068 116208349 -83421801 - Charlie8 DNA MER1_type -1026 1391 25 244 300 0 0 chr5 116208364 116208424 -83421726 + L2 LINE L2 3254 3313 0 29 47 0 0 chr5 116208577 116208620 -83421530 + AT_rich Low_complexity Low_complexity 1 43 0 712 325 157 27 chr5 116208866 116209764 -83420386 + L2 LINE L2 2244 3266 -6 29 0 0 0 chr5 116211765 116211794 -83418356 + AT_rich Low_complexity Low_complexity 1 29 0 334 304 148 46 chr5 116212702 116212851 -83417299 + L2 LINE L2 2452 2584 -730 2313 88 7 0 chr5 116212851 116213145 -83417005 - AluSc SINE Alu -13 296 1 334 304 148 46 chr5 116213145 116213429 -83416721 + L2 LINE L2 2584 2929 -385 1030 305 51 69 chr5 116213479 116214003 -83416147 + MLT1G LTR MaLR 11 533 -57 291 331 110 8 chr5 116214184 116214311 -83415839 + L2 LINE L2 3161 3300 -13 325 229 0 0 chr5 116214464 116214534 -83415616 - L1MC4 LINE L1 -1337 6705 6636 11427 144 19 23 chr5 116214544 116217352 -83412798 - L1MA1 LINE L1 -32 7689 4900 1693 176 9 43 chr5 116217352 116217675 -83412475 - AluJb SINE Alu 0 312 1 11427 144 19 23 chr5 116217675 116218235 -83411915 - L1MA1 LINE L1 -2821 4900 4339 * 12442 172 91 6 chr5 116218230 116220715 -83409435 - L1MA1 LINE L1 -4852 2713 17 2090 143 3 0 chr5 116221977 116222278 -83407872 - AluSx SINE Alu -10 302 1 2593 58 0 10 chr5 116222413 116222725 -83407425 + AluY SINE Alu 1 309 -2 722 303 36 24 chr5 116223079 116223330 -83406820 + MIR SINE MIR 1 254 -8 499 256 79 70 chr5 116224862 116225055 -83405095 + HAL1b LINE L1 326 516 -832 2594 118 0 0 chr5 116225055 116225419 -83404731 - THE1B LTR MaLR 0 364 1 499 256 79 70 chr5 116225419 116225489 -83404661 + HAL1b LINE L1 516 595 -753 215 30 0 30 chr5 116225489 116225522 -83404628 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 499 256 79 70 chr5 116225522 116225573 -83404577 + HAL1b LINE L1 595 644 -704 8022 62 4 13 chr5 116225954 116226651 -83403499 + MER11C LTR ERVK 1 686 -385 10920 27 5 0 chr5 116226651 116228714 -83401436 + L1PA4 LINE L1 4084 6155 0 8022 62 4 13 chr5 116228714 116229095 -83401055 + MER11C LTR ERVK 686 1069 -2 1358 223 12 35 chr5 116229504 116229644 -83400506 + AluJo SINE Alu 1 143 -169 2153 104 31 0 chr5 116229644 116229932 -83400218 + AluSx SINE Alu 1 297 -15 1358 223 12 35 chr5 116229932 116230110 -83400040 + AluJo SINE Alu 143 312 0 27 62 0 0 chr5 116230277 116230325 -83399825 + AT_rich Low_complexity Low_complexity 1 48 0 237 305 260 17 chr5 116230425 116230602 -83399548 - MIR SINE MIR -3 259 40 301 230 138 13 chr5 116230760 116230912 -83399238 - L1ME4a LINE L1 -15 6106 5936 1265 139 10 0 chr5 116231100 116231308 -83398842 + MER2 DNA MER2_type 1 210 -135 545 169 0 0 chr5 116231500 116231583 -83398567 - Tigger7 DNA MER2_type -9 2478 2396 * 2389 200 26 10 chr5 116231582 116232088 -83398062 - Tigger7 DNA MER2_type -212 521 8 623 321 149 11 chr5 116232160 116232690 -83397460 - L1M4 LINE L1 -1488 4658 4056 279 79 0 0 chr5 116232740 116232778 -83397372 + (CTG)n Simple_repeat Simple_repeat 1 38 0 26 74 0 0 chr5 116233179 116233233 -83396917 + AT_rich Low_complexity Low_complexity 1 54 0 2234 113 0 0 chr5 116233568 116233861 -83396289 - AluSg SINE Alu -15 295 3 2963 172 0 4 chr5 116234019 116234507 -83395643 - MER66B LTR ERV1 0 486 1 387 240 120 27 chr5 116234521 116234671 -83395479 - HAL1b LINE L1 -785 563 400 21 0 0 0 chr5 116236445 116236466 -83393684 + AT_rich Low_complexity Low_complexity 1 21 0 2223 130 49 0 chr5 116236676 116237023 -83393127 + THE1B LTR MaLR 1 364 0 10303 96 43 41 chr5 116237023 116238600 -83391550 + THE1B-int LTR MaLR 1 1580 0 1986 135 96 6 chr5 116238600 116238934 -83391216 + THE1B LTR MaLR 1 364 0 213 39 0 0 chr5 116239016 116239042 -83391108 + (TC)n Simple_repeat Simple_repeat 1 26 0 1895 124 69 0 chr5 116239042 116239316 -83390834 - AluSx SINE Alu -19 293 1 2192 109 13 0 chr5 116239787 116240089 -83390061 - AluSg SINE Alu -4 306 1 343 275 35 56 chr5 116240274 116240416 -83389734 + L2 LINE L2 3169 3307 -6 2336 58 34 0 chr5 116242354 116242649 -83387501 - AluY SINE Alu -6 305 1 648 294 36 5 chr5 116242864 116243058 -83387092 - MIR SINE MIR 0 262 63 202 132 26 0 chr5 116243088 116243126 -83387024 + (CAA)n Simple_repeat Simple_repeat 2 40 0 195 42 0 0 chr5 116244199 116244223 -83385927 + (T)n Simple_repeat Simple_repeat 1 24 0 1002 239 92 44 chr5 116244764 116245220 -83384930 + MER74B LTR ERVL 70 547 -75 414 104 0 0 chr5 116245573 116245640 -83384510 + Alu SINE Alu 244 310 -2 309 261 190 35 chr5 116245739 116245881 -83384269 - L1ME3 LINE L1 -274 5888 5725 12410 41 1 1 chr5 116245910 116247551 -83382599 - L1P LINE L1 -2613 3533 1894 1686 120 4 0 chr5 116247657 116247890 -83382260 - AluSg SINE Alu -76 234 1 2158 107 0 10 chr5 116248438 116248736 -83381414 + AluSq SINE Alu 1 295 -18 270 0 0 0 chr5 116248737 116248767 -83381383 + (GA)n Simple_repeat Simple_repeat 1 30 0 2212 101 0 0 chr5 116249471 116249774 -83380376 - AluSc SINE Alu 0 303 1 210 276 66 13 chr5 116249955 116250031 -83380119 + L2 LINE L2 3230 3309 -4 5253 155 29 18 chr5 116250116 116251028 -83379122 + MER49 LTR ERV1 1 922 -1 275 247 172 48 chr5 116252079 116252265 -83377885 - MLT1L LTR MaLR -170 445 237 254 240 27 40 chr5 116252278 116252353 -83377797 - LTR67 LTR ERVL -392 165 92 1607 230 137 33 chr5 116252650 116253264 -83376886 + LTR50 LTR ERVL 1 678 -117 1594 133 0 0 chr5 116253608 116253833 -83376317 + AluSg/x SINE Alu 86 310 -2 1050 315 137 23 chr5 116255374 116256203 -83373947 - L2 LINE L2 0 3313 2382 378 0 0 0 chr5 116257269 116257311 -83372839 + (CA)n Simple_repeat Simple_repeat 2 43 0 392 231 120 0 chr5 116257380 116257497 -83372653 - L1ME3A LINE L1 0 6170 6040 408 248 168 12 chr5 116257647 116257808 -83372342 - MIR SINE MIR -66 196 11 2436 112 0 0 chr5 116258022 116258334 -83371816 + AluSx SINE Alu 1 312 0 209 159 23 0 chr5 116258879 116258923 -83371227 + CT-rich Low_complexity Low_complexity 2 46 0 1956 162 0 7 chr5 116259723 116260031 -83370119 - AluSx SINE Alu -2 310 5 816 241 83 22 chr5 116260525 116260936 -83369214 - L1MC5 LINE L1 -53 7908 7473 2411 82 63 11 chr5 116261096 116261462 -83368688 - L1PA13 LINE L1 -19 6144 5760 767 240 165 57 chr5 116261584 116262201 -83367949 - L1MC5 LINE L1 -568 7393 6710 21 0 0 0 chr5 116262225 116262246 -83367904 + AT_rich Low_complexity Low_complexity 1 21 0 1445 142 229 21 chr5 116262474 116262839 -83367311 + MSTA LTR MaLR 1 428 0 413 325 66 69 chr5 116263023 116263401 -83366749 - HAL1b LINE L1 -894 454 78 2128 186 0 0 chr5 116265591 116265956 -83364194 + MLT1A1 LTR MaLR 1 365 0 363 336 91 67 chr5 116266179 116266477 -83363673 - L2 LINE L2 0 3272 2968 2172 116 0 7 chr5 116269086 116269389 -83360761 + AluY SINE Alu 1 301 -10 200 339 0 31 chr5 116269909 116269974 -83360176 + L2 LINE L2 3117 3179 -93 747 232 17 22 chr5 116270946 116271188 -83358962 - L1MB8 LINE L1 -189 5989 5766 1076 76 0 0 chr5 116271195 116271326 -83358824 + AluSc SINE Alu 1 131 -178 838 265 38 13 chr5 116271342 116271584 -83358566 + LTR40c LTR ERVL 207 456 -9 309 330 104 45 chr5 116271665 116271953 -83358197 + L2 LINE L2 1493 1797 -1517 369 266 43 49 chr5 116272239 116272423 -83357727 + MIR SINE MIR 79 261 -1 1651 160 147 25 chr5 116273254 116273762 -83356388 + MLT2A2 LTR ERVL 1 554 0 2267 102 17 23 chr5 116274251 116274604 -83355546 + L1PA13 LINE L1 5811 6161 -2 216 204 0 0 chr5 116274618 116274662 -83355488 + A-rich Low_complexity Low_complexity 1 44 0 234 282 0 42 chr5 116276135 116276206 -83353944 - MIR SINE MIR -139 123 56 2027 180 11 3 chr5 116276589 116276951 -83353199 - MLT1A1 LTR MaLR 0 365 1 300 176 0 0 chr5 116277041 116277092 -83353058 - L2 LINE L2 0 3313 3263 24 53 0 0 chr5 116277648 116277686 -83352464 + AT_rich Low_complexity Low_complexity 1 38 0 563 313 112 22 chr5 116278806 116279335 -83350815 + MLT1L LTR MaLR 1 609 -6 775 348 48 16 chr5 116280497 116280931 -83349219 + MLT1K LTR MaLR 141 588 0 21 36 0 0 chr5 116281520 116281548 -83348602 + AT_rich Low_complexity Low_complexity 1 28 0 509 317 147 29 chr5 116282247 116282588 -83347562 - MLT1K LTR MaLR 0 588 208 2029 110 0 0 chr5 116284027 116284300 -83345850 - AluSc SINE Alu -12 297 25 22 35 0 0 chr5 116284553 116284582 -83345568 + AT_rich Low_complexity Low_complexity 1 29 0 1265 185 86 41 chr5 116284926 116284977 -83345173 + Charlie1 DNA MER1_type 2343 2390 -371 1215 219 61 15 chr5 116284977 116285306 -83344844 - MER2 DNA MER2_type 0 344 1 1265 185 86 41 chr5 116285306 116285592 -83344558 + Charlie1 DNA MER1_type 2390 2661 -100 1807 140 21 4 chr5 116285592 116285871 -83344279 + AluSx SINE Alu 1 284 -28 1265 185 86 41 chr5 116285871 116285885 -83344265 + Charlie1 DNA MER1_type 2661 2673 -88 194 0 39 0 chr5 116285885 116285911 -83344239 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1265 185 86 41 chr5 116285911 116285951 -83344199 + Charlie1 DNA MER1_type 2673 2754 -7 1148 214 173 29 chr5 116287492 116287838 -83342312 + MSTD LTR MaLR 1 396 0 26 30 0 0 chr5 116288087 116288120 -83342030 + AT_rich Low_complexity Low_complexity 1 33 0 1331 303 59 30 chr5 116289142 116289699 -83340451 + L2 LINE L2 324 896 -2418 192 301 80 25 chr5 116290679 116290878 -83339272 + L2 LINE L2 1612 1821 -1493 534 295 182 47 chr5 116290909 116291561 -83338589 + L2 LINE L2 2570 3313 0 187 200 14 114 chr5 116291670 116291740 -83338410 - L3b LINE CR1 -231 1352 1290 378 283 141 38 chr5 116292696 116292880 -83337270 + MIR SINE MIR 53 255 -7 26 30 0 0 chr5 116293055 116293088 -83337062 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr5 116293715 116293740 -83336410 + AT_rich Low_complexity Low_complexity 1 25 0 1215 149 5 5 chr5 116295159 116295380 -83334770 + L1PA13 LINE L1 4943 5163 -983 4386 100 26 26 chr5 116295386 116296069 -83334081 + L1PA13 LINE L1 5481 6163 0 22 35 0 0 chr5 116297127 116297156 -83332994 + AT_rich Low_complexity Low_complexity 1 29 0 227 87 43 0 chr5 116297657 116297703 -83332447 + (TCTG)n Simple_repeat Simple_repeat 2 49 0 7690 22 0 0 chr5 116297795 116299154 -83330996 + L1PA3 LINE L1 4820 6178 0 704 122 114 0 chr5 116299921 116300044 -83330106 - AluSg/x SINE Alu -7 302 166 2739 187 71 21 chr5 116300045 116300677 -83329473 - L1MA9 LINE L1 -1 6311 5648 2115 159 35 14 chr5 116300677 116301112 -83329038 - L1MA9 LINE L1 -1534 4612 4169 214 209 0 0 chr5 116301460 116301503 -83328647 + MIR SINE MIR 218 260 -2 242 302 10 10 chr5 116301640 116301736 -83328414 - L1M2 LINE L1 -739 5573 5478 1340 187 31 102 chr5 116301749 116302171 -83327979 + MSTD LTR MaLR 1 392 -4 184 279 0 0 chr5 116302351 116302394 -83327756 + MIR SINE MIR 217 259 -3 1494 212 24 24 chr5 116302486 116302821 -83327329 + MLT1A1 LTR MaLR 1 335 -30 2291 100 0 19 chr5 116302937 116303256 -83326894 + AluSq SINE Alu 1 313 0 250 295 36 50 chr5 116303507 116303646 -83326504 - MIR SINE MIR -6 256 120 454 268 59 7 chr5 116304449 116304602 -83325548 - MIR SINE MIR -74 188 28 289 143 0 171 chr5 116305948 116306053 -83324097 - L1MC4 LINE L1 -97 7945 7859 29 28 0 0 chr5 116306649 116306685 -83323465 + AT_rich Low_complexity Low_complexity 1 36 0 2116 165 14 82 chr5 116306795 116307044 -83323106 + MLT1C LTR MaLR 7 209 -258 3685 179 26 48 chr5 116307044 116307803 -83322347 + LTR39 LTR ERV1 1 744 -39 315 0 0 0 chr5 116307803 116307838 -83322312 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3685 179 26 48 chr5 116307838 116307878 -83322272 + LTR39 LTR ERV1 744 783 0 2116 165 14 82 chr5 116307878 116308114 -83322036 + MLT1C LTR MaLR 209 459 -8 275 24 0 49 chr5 116308129 116308170 -83321980 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 262 157 0 146 chr5 116308261 116308350 -83321800 - MER116 DNA Mariner -4 76 1 31 36 0 18 chr5 116310173 116310205 -83319945 + AT_rich Low_complexity Low_complexity 1 33 -22 267 31 0 0 chr5 116310205 116310237 -83319913 + (TG)n Simple_repeat Simple_repeat 2 33 0 31 36 0 18 chr5 116310237 116310260 -83319890 + AT_rich Low_complexity Low_complexity 33 55 0 1436 216 67 65 chr5 116311569 116312583 -83317567 + L1ME1 LINE L1 1762 2764 -3451 355 214 71 0 chr5 116312580 116312678 -83317472 + L1ME1 LINE L1 4773 4877 -1338 * 792 240 35 6 chr5 116312803 116312974 -83317176 + MIR SINE MIR 62 237 -25 25 31 0 0 chr5 116313078 116313110 -83317040 + AT_rich Low_complexity Low_complexity 1 32 0 1336 238 113 15 chr5 116313110 116313590 -83316560 + L1ME1 LINE L1 4884 5410 -805 10791 163 20 10 chr5 116313592 116315594 -83314556 + L1MA8 LINE L1 3309 5331 -815 2819 206 26 12 chr5 116315594 116316241 -83313909 + L1P LINE L1 4557 5212 -934 364 156 58 159 chr5 116316256 116316564 -83313586 + L1MA8 LINE L1 5991 6267 -24 1999 231 44 17 chr5 116316575 116316708 -83313442 + L1ME1 LINE L1 5389 5517 -718 2135 186 55 7 chr5 116316708 116317148 -83313002 + MER65C LTR ERV1 1 461 0 1999 231 44 17 chr5 116317148 116317538 -83312612 + L1ME1 LINE L1 5517 5926 -309 618 249 24 12 chr5 116317559 116317728 -83312422 + L1ME1 LINE L1 6062 6232 -3 246 237 137 42 chr5 116322384 116322556 -83307594 - L1ME LINE L1 -280 5953 5760 4050 42 2 2 chr5 116322838 116323332 -83306818 + L1PA3 LINE L1 5661 6154 -1 181 222 0 89 chr5 116323441 116323486 -83306664 - L2 LINE L2 -37 3235 3195 24 67 0 0 chr5 116323512 116323557 -83306593 + AT_rich Low_complexity Low_complexity 1 45 0 288 264 127 9 chr5 116323611 116323721 -83306429 + MER94 DNA DNA 12 134 0 2239 223 85 109 chr5 116323869 116324673 -83305477 - L1ME LINE L1 -558 5675 4853 934 149 0 14 chr5 116324673 116324821 -83305329 + MER2 DNA MER2_type 15 160 -185 2239 223 85 109 chr5 116324821 116324896 -83305254 - L1ME LINE L1 -1380 4853 4778 189 0 53 53 chr5 116324896 116324934 -83305216 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2239 223 85 109 chr5 116324934 116325937 -83304213 - L1ME LINE L1 -1455 4778 3703 4195 39 4 0 chr5 116325950 116326462 -83303688 - L1PA4 LINE L1 -1927 4219 3706 9774 27 0 1 chr5 116326462 116328396 -83301754 + L1PA4 LINE L1 4220 6152 -3 21 36 0 0 chr5 116328444 116328472 -83301678 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 116328545 116328577 -83301573 + AT_rich Low_complexity Low_complexity 1 32 0 2403 250 135 36 chr5 116328846 116329564 -83300586 - L1ME LINE L1 -2541 3674 3028 6613 69 5 32 chr5 116329564 116330573 -83299577 + L1PA8 LINE L1 5187 6170 -2 2403 250 135 36 chr5 116330573 116331389 -83298761 - L1ME LINE L1 -3187 3028 2022 714 291 41 38 chr5 116331495 116331839 -83298311 - L1ME LINE L1 -4519 1877 1533 418 165 101 0 chr5 116331892 116331971 -83298179 - Tigger5 DNA MER2_type 0 2323 2237 456 224 0 12 chr5 116331985 116332070 -83298080 + Tigger5 DNA MER2_type 4 87 -2236 269 238 0 16 chr5 116332066 116332129 -83298021 - Tigger5 DNA MER2_type -7 2316 2255 * 1078 259 71 61 chr5 116332139 116332960 -83297190 - L1ME LINE L1 -4906 1490 662 330 313 113 0 chr5 116333239 116333399 -83296751 - L1ME LINE L1 -6183 213 36 659 222 113 11 chr5 116334006 116334191 -83295959 + Charlie8 DNA MER1_type 28 231 -2186 433 268 28 45 chr5 116334416 116334595 -83295555 - MER104 DNA Tc2 -4 176 1 2224 89 10 7 chr5 116334602 116334920 -83295230 + AluSp SINE Alu 1 313 0 221 351 98 33 chr5 116334990 116335266 -83294884 + L2 LINE L2 2593 2886 -428 269 336 106 65 chr5 116335483 116335804 -83294346 + MER102b DNA MER1_type 2 335 -6 253 233 0 33 chr5 116335854 116335914 -83294236 + L2 LINE L2 3200 3257 -15 202 299 66 72 chr5 116335906 116336073 -83294077 - MIR SINE MIR -50 212 47 * 217 175 25 0 chr5 116336424 116336464 -83293686 + GA-rich Low_complexity Low_complexity 2 42 0 198 287 74 65 chr5 116337255 116337363 -83292787 - MIR SINE MIR -58 204 96 282 56 0 0 chr5 116337473 116337509 -83292641 + (T)n Simple_repeat Simple_repeat 1 36 0 770 194 7 7 chr5 116337575 116337714 -83292436 - MER45A DNA AcHobo -39 139 1 21 0 0 0 chr5 116338330 116338351 -83291799 + AT_rich Low_complexity Low_complexity 1 21 0 308 241 58 73 chr5 116339794 116339931 -83290219 + MIR SINE MIR 122 256 -6 415 316 156 13 chr5 116341701 116341926 -83288224 - MIR SINE MIR -3 259 3 626 212 18 65 chr5 116342144 116342314 -83287836 + MER20 DNA MER1_type 55 216 -3 689 310 87 8 chr5 116342910 116343152 -83286998 - MIR SINE MIR 0 262 2 246 337 117 6 chr5 116344829 116344992 -83285158 + L2 LINE L2 2654 2834 -480 23392 27 0 0 chr5 116347149 116350745 -83279405 - L1HS LINE L1 -1 6154 2559 195 180 0 0 chr5 116351348 116351371 -83278779 + (TTATA)n Simple_repeat Simple_repeat 1 23 -27 2199 114 0 10 chr5 116351371 116351679 -83278471 - AluSc SINE Alu -2 307 3 195 180 0 0 chr5 116351679 116351705 -83278445 + (TTATA)n Simple_repeat Simple_repeat 22 50 0 429 288 5 126 chr5 116352154 116352352 -83277798 + MIR3 SINE MIR 14 187 -21 2397 141 81 11 chr5 116352743 116353189 -83276961 + MER31A LTR ERV1 1 477 -8 217 338 153 20 chr5 116353446 116353846 -83276304 - L2 LINE L2 -339 2975 2523 524 275 123 12 chr5 116353858 116354029 -83276121 - MIR SINE MIR -7 255 66 21 71 0 0 chr5 116354549 116354591 -83275559 + AT_rich Low_complexity Low_complexity 1 42 0 1773 211 102 46 chr5 116354621 116355123 -83275027 + L1MD3 LINE L1 7303 7832 -163 23 68 0 0 chr5 116355123 116355167 -83274983 + AT_rich Low_complexity Low_complexity 1 44 0 310 250 96 73 chr5 116355210 116355346 -83274804 - MIR SINE MIR -66 196 58 368 339 63 8 chr5 116356584 116356711 -83273439 - MIR SINE MIR -109 153 20 258 32 0 0 chr5 116357424 116357455 -83272695 + (A)n Simple_repeat Simple_repeat 1 31 0 905 228 93 48 chr5 116357645 116358000 -83272150 - MLT1A2 LTR MaLR 0 374 4 487 240 16 23 chr5 116359093 116359222 -83270928 - L2 LINE L2 -6 3307 3180 397 284 26 32 chr5 116359705 116359860 -83270290 + MIR SINE MIR 20 173 -89 290 360 27 0 chr5 116360104 116360215 -83269935 - MIR SINE MIR -30 232 119 204 167 0 42 chr5 116362254 116362302 -83267848 + A-rich Low_complexity Low_complexity 1 46 0 1007 247 98 0 chr5 116363105 116363392 -83266758 + MER58B DNA MER1_type 5 319 -22 21 0 0 0 chr5 116363478 116363499 -83266651 + AT_rich Low_complexity Low_complexity 1 21 0 1008 236 50 48 chr5 116364171 116364608 -83265542 - MER113 DNA MER1_type? -42 479 42 985 159 22 11 chr5 116364771 116364953 -83265197 + MER20 DNA MER1_type 35 218 -1 216 200 0 0 chr5 116365437 116365482 -83264668 + A-rich Low_complexity Low_complexity 1 45 0 439 283 14 51 chr5 116366249 116366387 -83263763 - L2 LINE L2 0 3272 3140 1535 167 17 101 chr5 116366732 116367140 -83263010 + MLT1A2 LTR MaLR 1 374 0 529 232 51 34 chr5 116367535 116367712 -83262438 - MER112 DNA MER1_type 0 260 81 342 0 0 0 chr5 116367712 116367750 -83262400 + (CA)n Simple_repeat Simple_repeat 2 39 0 1298 209 80 7 chr5 116369339 116369626 -83260524 + Tigger5 DNA MER2_type 1 308 -2015 1299 141 9 5 chr5 116369628 116369841 -83260309 + Tigger5 DNA MER2_type 2110 2323 0 222 37 0 0 chr5 116371796 116371823 -83258327 + (CCG)n Simple_repeat Simple_repeat 2 28 0 244 247 34 34 chr5 116372033 116372122 -83258028 + CT-rich Low_complexity Low_complexity 1 89 0 243 342 148 4 chr5 116372852 116373095 -83257055 - L3b LINE CR1 -194 1389 1112 6900 121 38 54 chr5 116373276 116373470 -83256680 - Tigger3b DNA MER2_type -1798 1230 1035 3571 125 11 6 chr5 116373470 116373991 -83256159 - MER1A DNA MER1_type 0 527 4 6900 121 38 54 chr5 116373991 116375045 -83255105 - Tigger3b DNA MER2_type -1993 1035 1 25 0 0 0 chr5 116375693 116375718 -83254432 + AT_rich Low_complexity Low_complexity 1 25 0 299 320 158 43 chr5 116375728 116376050 -83254100 + HAL1 LINE L1 21 379 -2128 5928 158 45 24 chr5 116376052 116377341 -83252809 + L1MA4 LINE L1 4170 5480 -754 4341 155 34 25 chr5 116377394 116378246 -83251904 + L1MA4 LINE L1 5436 6295 -5 301 315 121 66 chr5 116378315 116378572 -83251578 + HAL1 LINE L1 418 688 -1819 1112 229 49 0 chr5 116378585 116378852 -83251298 + L1ME1 LINE L1 5887 6166 0 2617 282 57 10 chr5 116378868 116379210 -83250940 + L1M4 LINE L1 4134 4458 -1688 5122 107 9 1 chr5 116379210 116379946 -83250204 + L1PA16 LINE L1 5420 6161 -5 2617 282 57 10 chr5 116379946 116380738 -83249412 + L1M4 LINE L1 4458 5322 -824 234 280 102 25 chr5 116380789 116380907 -83249243 + L1MCb LINE L1 408 534 -5888 1980 133 46 27 chr5 116380987 116381355 -83248795 - THE1C LTR MaLR 0 375 1 1690 273 49 25 chr5 116381750 116382598 -83247552 + L1MCb LINE L1 813 1692 -4888 1198 166 108 15 chr5 116382671 116382917 -83247233 - L1P LINE L1 -906 5240 4967 2053 103 16 3 chr5 116382917 116383227 -83246923 + L1PA13 LINE L1 5849 6162 -1 492 243 36 40 chr5 116383227 116383347 -83246803 + L1MCb LINE L1 1795 1915 -5026 198 0 0 0 chr5 116383347 116383369 -83246781 + (TG)n Simple_repeat Simple_repeat 1 22 0 492 243 36 40 chr5 116383369 116383470 -83246680 + L1MCb LINE L1 1915 2015 -4926 1349 256 130 63 chr5 116383529 116383884 -83246266 + L1M4 LINE L1 3123 3453 -2693 240 35 0 0 chr5 116383884 116383913 -83246237 + (GA)n Simple_repeat Simple_repeat 2 30 0 1349 256 130 63 chr5 116383913 116384069 -83246081 + L1M4 LINE L1 3453 3597 -2549 2056 104 4 0 chr5 116384069 116384348 -83245802 + AluSx SINE Alu 20 299 -13 1349 256 130 63 chr5 116384348 116384982 -83245168 + L1M4 LINE L1 3597 4346 -1800 25 65 0 0 chr5 116385027 116385073 -83245077 + AT_rich Low_complexity Low_complexity 1 46 0 454 273 98 0 chr5 116385471 116385614 -83244536 + LTR16A LTR ERVL 211 367 -83 605 275 83 54 chr5 116385842 116386281 -83243869 - MLT1G3 LTR MaLR 0 555 28 617 256 72 0 chr5 116386747 116386927 -83243223 + HERV16 LTR ERVL 559 751 -4245 342 324 118 42 chr5 116388007 116388330 -83241820 + L1MC/D LINE L1 3878 4220 -1926 335 344 96 32 chr5 116388470 116388938 -83241212 + L1MC/D LINE L1 4671 5168 -978 351 312 83 15 chr5 116388966 116389185 -83240965 + L1MC/D LINE L1 5196 5142 -1009 213 65 0 0 chr5 116389185 116389216 -83240934 + (TG)n Simple_repeat Simple_repeat 2 32 0 351 312 83 15 chr5 116389216 116389501 -83240649 + L1MC/D LINE L1 5141 5405 -746 201 218 0 36 chr5 116390183 116390238 -83239912 + CT-rich Low_complexity Low_complexity 3 55 0 287 302 94 9 chr5 116390528 116390634 -83239516 - L2 LINE L2 -4 3309 3195 458 293 132 11 chr5 116391016 116391190 -83238960 + MIR SINE MIR 44 238 -24 356 351 105 22 chr5 116391645 116392076 -83238074 + HAL1b LINE L1 169 499 -849 234 360 81 43 chr5 116392611 116392980 -83237170 - MLT1J LTR MaLR -127 384 2 462 329 145 10 chr5 116393191 116393598 -83236552 + L1ME LINE L1 2110 2571 -3575 269 345 0 0 chr5 116394770 116394857 -83235293 + MER20B DNA MER1_type 1 87 -696 2196 143 13 49 chr5 116394882 116395329 -83234821 - L1MA10 LINE L1 -3 6331 5901 655 287 51 0 chr5 116395375 116395570 -83234580 + MER20B DNA MER1_type 89 293 -490 282 267 122 12 chr5 116396309 116396481 -83233669 + MER20B DNA MER1_type 533 723 -60 696 219 311 25 chr5 116398203 116398768 -83231382 - LTR50 LTR ERVL -2 793 9 291 209 29 9 chr5 116398900 116399005 -83231145 + (TAA)n Simple_repeat Simple_repeat 3 109 0 257 298 180 19 chr5 116399434 116399595 -83230555 - MIR SINE MIR 0 262 76 288 258 112 11 chr5 116399849 116399938 -83230212 - L3 LINE CR1 0 1577 1480 265 247 22 11 chr5 116399924 116400013 -83230137 - MIR SINE MIR -1 261 172 * 1067 288 120 46 chr5 116400016 116400206 -83229944 + L1ME LINE L1 4268 4443 -1703 1560 155 53 15 chr5 116400206 116400471 -83229679 + AluJb SINE Alu 24 298 -14 1067 288 120 46 chr5 116400471 116401107 -83229043 + L1ME LINE L1 4443 5155 -991 678 270 19 27 chr5 116401159 116401422 -83228728 + L1ME LINE L1 5254 5514 -650 29 78 0 0 chr5 116401518 116401582 -83228568 + AT_rich Low_complexity Low_complexity 1 64 0 30 0 0 0 chr5 116402233 116402263 -83227887 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 116404110 116404131 -83226019 + AT_rich Low_complexity Low_complexity 1 21 0 226 120 60 40 chr5 116404398 116404448 -83225702 - Charlie8 DNA MER1_type -1006 1411 1361 219 338 0 15 chr5 116405280 116405348 -83224802 - L2 LINE L2 -7 3265 3199 186 43 0 0 chr5 116405352 116405375 -83224775 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 413 180 157 0 chr5 116405931 116406020 -83224130 + MIR SINE MIR 97 199 -63 408 40 0 0 chr5 116406047 116406097 -83224053 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 21 0 0 0 chr5 116406203 116406224 -83223926 + AT_rich Low_complexity Low_complexity 1 21 0 255 228 154 20 chr5 116407520 116407669 -83222481 + L1MC4 LINE L1 5313 5481 -2327 725 0 0 0 chr5 116407682 116407767 -83222383 - L1PA2 LINE L1 -3 6152 6068 393 0 0 0 chr5 116407767 116407816 -83222334 + L1HS LINE L1 5864 5912 -243 456 327 123 11 chr5 116407836 116408212 -83221938 + L1MC4 LINE L1 5504 5822 -299 201 213 62 0 chr5 116409271 116409351 -83220799 + (TTA)n Simple_repeat Simple_repeat 3 87 0 360 298 49 76 chr5 116409438 116409663 -83220487 + HAL1 LINE L1 1 219 -2288 222 37 0 0 chr5 116409790 116409817 -83220333 + (CA)n Simple_repeat Simple_repeat 2 28 0 296 278 0 0 chr5 116409830 116409920 -83220230 - L1MC4 LINE L1 -1339 6703 6614 284 284 0 37 chr5 116409864 116409973 -83220177 + L1MC4 LINE L1 6614 6718 -1324 * 2142 101 21 0 chr5 116410002 116410289 -83219861 + AluSq SINE Alu 7 299 -14 249 313 67 31 chr5 116411141 116411365 -83218785 + L1MC4a LINE L1 4803 5034 -1112 666 211 43 37 chr5 116411380 116411541 -83218609 + FAM SINE Alu 8 169 -16 310 151 27 0 chr5 116411541 116411614 -83218536 + (TA)n Simple_repeat Simple_repeat 1 75 0 262 281 0 0 chr5 116411614 116411671 -83218479 + FAM SINE Alu 99 155 -20 622 161 29 0 chr5 116411671 116411845 -83218305 + (TA)n Simple_repeat Simple_repeat 2 180 0 666 197 11 6 chr5 116411867 116412045 -83218105 + (TA)n Simple_repeat Simple_repeat 1 179 0 1250 314 103 8 chr5 116412234 116412762 -83217388 + L1MC4a LINE L1 5254 5891 -1917 829 146 0 8 chr5 116412762 116412892 -83217258 + FLAM_A SINE Alu 2 130 -3 1250 314 103 8 chr5 116412892 116413197 -83216953 + L1MC4a LINE L1 5891 6166 -1642 2016 107 0 49 chr5 116413695 116414022 -83216128 - AluY SINE Alu 0 311 1 188 68 0 91 chr5 116414037 116414081 -83216069 + (T)n Simple_repeat Simple_repeat 1 40 0 2832 51 3 8 chr5 116414082 116414455 -83215695 - L1PA2 LINE L1 0 6155 5785 34782 37 30 2 chr5 116414555 116418874 -83211276 - L1P LINE L1 -1696 4450 8 21 36 0 0 chr5 116420576 116420604 -83209546 + AT_rich Low_complexity Low_complexity 1 28 0 625 177 8 137 chr5 116421396 116421644 -83208506 - Charlie5 DNA MER1_type -10 2602 2387 2099 145 62 6 chr5 116421648 116421986 -83208164 - LTR18A LTR ERVL 0 357 1 3529 173 19 0 chr5 116421987 116422578 -83207572 - HERVL18 LTR ERVL 0 6047 5446 376 246 42 25 chr5 116423104 116423222 -83206928 - MER104 DNA Tc2 -60 120 1 911 197 49 10 chr5 116423454 116423657 -83206493 + MER96B DNA MER1_type? 25 235 -182 24 0 0 0 chr5 116423888 116423912 -83206238 + AT_rich Low_complexity Low_complexity 1 24 0 2610 40 0 3 chr5 116427065 116427369 -83202781 + AluY SINE Alu 1 303 -8 2182 100 0 27 chr5 116427379 116427678 -83202472 + AluSg SINE Alu 1 291 -19 1752 148 17 35 chr5 116428182 116428472 -83201678 - AluJb SINE Alu -27 285 1 380 158 0 24 chr5 116428661 116428743 -83201407 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 1521 183 33 4 chr5 116429301 116429575 -83200575 + AluJo SINE Alu 1 282 -30 231 252 168 9 chr5 116429821 116429928 -83200222 - L1ME4a LINE L1 -5 6116 5993 388 346 62 39 chr5 116430787 116431171 -83198979 + ERVL LTR ERVL 4546 4938 -826 2218 117 3 7 chr5 116431739 116432048 -83198102 - AluSx SINE Alu -4 308 1 1406 280 85 47 chr5 116432454 116433322 -83196828 + L1ME3A LINE L1 5263 6163 -7 24 32 0 0 chr5 116434382 116434413 -83195737 + AT_rich Low_complexity Low_complexity 1 31 0 283 355 0 9 chr5 116434487 116434594 -83195556 + MIR SINE MIR 20 125 -137 278 336 71 29 chr5 116434805 116434945 -83195205 + MIR SINE MIR 81 226 -36 226 272 18 18 chr5 116437185 116437299 -83192851 + L1ME LINE L1 5718 5831 -333 1551 247 47 39 chr5 116437328 116437863 -83192287 + HsTC2a DNA Tc2 72 610 -134 2174 198 19 12 chr5 116437955 116438365 -83191785 + MER47B DNA MER2_type 2 414 -4 2548 24 7 3 chr5 116439038 116439336 -83190814 - AluY SINE Alu -12 299 1 203 122 0 24 chr5 116441356 116441397 -83188753 + (CA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr5 116442244 116442265 -83187885 + AT_rich Low_complexity Low_complexity 1 21 0 730 180 0 8 chr5 116444544 116444666 -83185484 - FLAM_A SINE Alu -12 121 1 381 311 70 75 chr5 116444845 116445177 -83184973 + L1M4 LINE L1 1186 1518 -1254 1559 140 17 14 chr5 116445177 116445470 -83184680 - L1MA4 LINE L1 0 6300 6007 381 311 70 75 chr5 116445470 116445721 -83184429 + L1M4 LINE L1 1518 2013 -759 1374 102 33 0 chr5 116445900 116446115 -83184035 + L1MA7 LINE L1 6070 6291 0 22 0 0 0 chr5 116446208 116446230 -83183920 + AT_rich Low_complexity Low_complexity 1 22 0 241 304 0 0 chr5 116446269 116446338 -83183812 + MLT1L LTR MaLR 4 72 -543 658 291 103 7 chr5 116446376 116446647 -83183503 + L1MC5 LINE L1 5494 5790 -2018 1027 278 114 31 chr5 116446650 116447143 -83183007 - L2 LINE L2 -2 3311 2762 468 250 0 0 chr5 116447306 116447434 -83182716 + (TA)n Simple_repeat Simple_repeat 1 128 0 247 279 0 12 chr5 116447787 116447873 -83182277 + (TA)n Simple_repeat Simple_repeat 2 86 0 312 48 0 0 chr5 116448977 116449019 -83181131 + (CA)n Simple_repeat Simple_repeat 1 42 0 330 290 89 30 chr5 116449673 116449842 -83180308 - MIR SINE MIR -5 257 79 2190 132 30 16 chr5 116449918 116450288 -83179862 + THE1C LTR MaLR 1 375 0 193 279 63 51 chr5 116450288 116450360 -83179790 - L2 LINE L2 -4 3268 3193 2418 34 41 0 chr5 116453382 116453675 -83176475 - AluY SINE Alu -6 305 1 898 251 16 55 chr5 116453798 116454053 -83176097 + L1MC5 LINE L1 6645 6889 -1072 443 329 82 9 chr5 116454089 116454320 -83175830 - L2 LINE L2 -1154 2160 1913 324 0 0 0 chr5 116454867 116454903 -83175247 + (TG)n Simple_repeat Simple_repeat 1 36 0 503 288 78 53 chr5 116455862 116456182 -83173968 - L2 LINE L2 0 3313 2986 401 337 25 6 chr5 116456988 116457151 -83172999 - L2 LINE L2 -313 3000 2835 251 352 126 40 chr5 116457337 116457584 -83172566 - L2 LINE L2 -509 2805 2538 2016 184 114 15 chr5 116458487 116458950 -83171200 + MER67D LTR ERV1 6 514 0 412 337 122 31 chr5 116459740 116460028 -83170122 - L2 LINE L2 -10 3262 2949 1638 45 2 5 chr5 116460711 116460924 -83169226 - L1PA3 LINE L1 -210 5945 5736 21 0 0 0 chr5 116461404 116461425 -83168725 + AT_rich Low_complexity Low_complexity 1 21 0 1200 311 22 24 chr5 116461603 116462098 -83168052 + L1MEc LINE L1 225 718 -5678 10501 176 16 17 chr5 116462104 116464848 -83165302 + L1PB1 LINE L1 2926 5590 -561 2108 122 7 0 chr5 116464848 116465143 -83165007 - AluSc SINE Alu -11 298 2 10501 176 16 17 chr5 116465143 116465698 -83164452 + L1PB1 LINE L1 5590 6144 -7 425 317 62 23 chr5 116465703 116466012 -83164138 + L1M4 LINE L1 3196 3516 -2630 1576 171 29 14 chr5 116466028 116466309 -83163841 + AluJo SINE Alu 5 289 -23 789 301 35 29 chr5 116466347 116466659 -83163491 - LTR40c LTR ERVL -5 460 147 26 0 0 0 chr5 116466659 116466685 -83163465 + AT_rich Low_complexity Low_complexity 1 26 0 255 314 237 39 chr5 116467056 116467776 -83162374 - L2 LINE L2 -657 2657 1782 3400 100 33 8 chr5 116467776 116468298 -83161852 - L1PA10 LINE L1 0 6168 5634 255 314 237 39 chr5 116468298 116468325 -83161825 - L2 LINE L2 -1532 1782 1762 233 326 194 0 chr5 116468439 116468537 -83161613 - MIR SINE MIR -138 124 8 298 302 0 34 chr5 116469212 116469361 -83160789 + CT-rich Low_complexity Low_complexity 3 146 0 26 50 0 0 chr5 116470266 116470306 -83159844 + AT_rich Low_complexity Low_complexity 1 40 0 1099 271 56 86 chr5 116471168 116471740 -83158410 - LTR67 LTR ERVL 0 557 3 454 254 58 120 chr5 116471936 116472295 -83157855 + MLT1J LTR MaLR 1 337 -113 252 0 0 0 chr5 116472404 116472432 -83157718 + (CA)n Simple_repeat Simple_repeat 2 29 0 254 304 13 0 chr5 116472464 116472543 -83157607 + L2 LINE L2 2447 2526 -788 837 160 0 0 chr5 116472662 116472793 -83157357 - FLAM_C SINE Alu 0 133 3 804 72 18 0 chr5 116472831 116472942 -83157208 - L1PA10 LINE L1 -5 6163 6051 484 308 87 0 chr5 116473837 116474009 -83156141 - LTR16A LTR ERVL -6 444 258 937 257 149 25 chr5 116474058 116474582 -83155568 + MLT1H1 LTR MaLR 1 544 -11 655 202 156 6 chr5 116475377 116475550 -83154600 - MLT1A1 LTR MaLR 0 365 167 278 225 101 4 chr5 116475568 116475694 -83154456 - MLT1A1 LTR MaLR -138 258 75 230 270 0 0 chr5 116475910 116475973 -83154177 + MER116 DNA Mariner 18 80 0 301 212 26 106 chr5 116475973 116476086 -83154064 - MIR SINE MIR -70 138 35 291 303 40 20 chr5 116476833 116476985 -83153165 - LTR67 LTR ERVL -4 553 399 554 318 92 0 chr5 116477270 116477487 -83152663 - MIR SINE MIR -6 256 20 21 57 0 0 chr5 116477713 116477748 -83152402 + AT_rich Low_complexity Low_complexity 1 35 0 456 352 35 22 chr5 116477969 116478199 -83151951 - L2 LINE L2 -453 2861 2629 1773 168 108 35 chr5 116478325 116478477 -83151673 + MSTB1 LTR MaLR 3 143 -289 2024 154 3 0 chr5 116478477 116478775 -83151375 - AluSx SINE Alu -11 301 3 1773 168 108 35 chr5 116478775 116479021 -83151129 + MSTB1 LTR MaLR 143 430 -2 808 289 40 9 chr5 116479918 116480146 -83150004 + MIR SINE MIR 27 261 -1 2986 101 46 2 chr5 116480163 116480554 -83149596 + MLT2A2 LTR ERVL 1 414 -39 215 40 60 20 chr5 116480554 116480604 -83149546 + (TA)n Simple_repeat Simple_repeat 2 53 0 2986 101 46 2 chr5 116480604 116480646 -83149504 + MLT2A2 LTR ERVL 414 453 0 252 360 61 18 chr5 116480728 116480750 -83149400 + L2 LINE L2 3154 3174 -98 2416 125 13 13 chr5 116480750 116481125 -83149025 - THE1C LTR MaLR 0 375 1 252 360 61 18 chr5 116481125 116481216 -83148934 + L2 LINE L2 3174 3272 0 1320 167 42 0 chr5 116481307 116481522 -83148628 - MLT1A1 LTR MaLR 0 365 142 319 217 52 70 chr5 116481581 116481696 -83148454 - L1MA9 LINE L1 -38 6274 6162 760 142 0 22 chr5 116481699 116481827 -83148323 - MLT1A1 LTR MaLR -205 160 35 1731 145 0 0 chr5 116481827 116482103 -83148047 + L1PB1 LINE L1 5868 6143 -8 261 0 0 0 chr5 116482134 116482163 -83147987 + (TAAAA)n Simple_repeat Simple_repeat 1 29 0 267 128 43 0 chr5 116482163 116482210 -83147940 - MLT1A1 LTR MaLR -316 49 1 223 284 32 32 chr5 116482301 116482396 -83147754 - MIR SINE MIR -44 218 124 248 191 5 223 chr5 116482461 116482515 -83147635 + MIR SINE MIR 45 109 -153 1926 165 35 19 chr5 116482515 116482884 -83147266 + THE1C LTR MaLR 1 375 0 248 191 5 223 chr5 116482884 116482964 -83147186 + MIR SINE MIR 109 129 -133 2735 46 43 46 chr5 116482964 116483355 -83146795 + L1PA8 LINE L1 5782 6171 -1 248 191 5 223 chr5 116483355 116483407 -83146743 + MIR SINE MIR 129 191 -71 597 283 20 0 chr5 116483910 116484062 -83146088 + MER5B DNA MER1_type 1 155 -23 716 180 77 2 chr5 116485302 116485587 -83144563 + MLT1A2 LTR MaLR 3 372 -2 21 0 0 0 chr5 116485788 116485809 -83144341 + AT_rich Low_complexity Low_complexity 1 21 0 1820 151 24 0 chr5 116487029 116487320 -83142830 - AluSx SINE Alu -12 300 3 2206 102 10 0 chr5 116487540 116487834 -83142316 + AluSp SINE Alu 2 298 -15 22 0 0 0 chr5 116489440 116489462 -83140688 + AT_rich Low_complexity Low_complexity 1 22 0 316 303 61 10 chr5 116490005 116490104 -83140046 + MLT1L LTR MaLR 1 104 -511 311 189 0 14 chr5 116490381 116490455 -83139695 + GA-rich Low_complexity Low_complexity 4 76 0 366 305 30 12 chr5 116490509 116490676 -83139474 + GA-rich Low_complexity Low_complexity 4 173 0 1769 49 0 0 chr5 116491012 116491217 -83138933 - AluY SINE Alu -106 205 1 287 119 0 0 chr5 116491217 116491259 -83138891 + MSTA LTR MaLR 387 428 0 1076 230 61 52 chr5 116491259 116491585 -83138565 + L1ME2 LINE L1 5826 6154 -10 3334 288 40 26 chr5 116493103 116493418 -83136732 + ERVL LTR ERVL 3985 4294 -1470 2034 130 54 122 chr5 116493418 116493527 -83136623 - LTR47A LTR ERVL 0 452 337 1732 183 3 3 chr5 116493527 116493833 -83136317 + AluJb SINE Alu 6 311 -1 2034 130 54 122 chr5 116493833 116494208 -83135942 - LTR47A LTR ERVL -115 337 1 3334 288 40 26 chr5 116494208 116495031 -83135119 + ERVL LTR ERVL 4294 5138 -626 778 274 171 22 chr5 116495031 116495393 -83134757 + LTR50 LTR ERVL 122 537 -258 247 337 11 0 chr5 116495447 116495542 -83134608 + LTR50 LTR ERVL 519 614 -181 387 300 100 7 chr5 116496480 116496620 -83133530 - MIR SINE MIR -81 181 29 21 0 0 0 chr5 116497043 116497064 -83133086 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr5 116497328 116497351 -83132799 + (CA)n Simple_repeat Simple_repeat 2 24 0 266 281 0 0 chr5 116497463 116497545 -83132605 - L1M4 LINE L1 -3146 3000 2919 844 214 30 0 chr5 116497592 116497793 -83132357 - L1MA6 LINE L1 -4 6296 6090 2938 154 29 8 chr5 116497794 116498320 -83131830 + L1MA6 LINE L1 5495 6031 -269 24 32 0 0 chr5 116498335 116498366 -83131784 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 116498956 116498984 -83131166 + AT_rich Low_complexity Low_complexity 1 28 0 390 346 107 29 chr5 116499056 116499299 -83130851 + L2 LINE L2 2531 2792 -522 1191 122 11 0 chr5 116499304 116499485 -83130665 + L1MC1 LINE L1 6145 6327 -6 2343 100 0 0 chr5 116499903 116500203 -83129947 - AluSc SINE Alu -7 302 3 9493 159 44 20 chr5 116500234 116500549 -83129601 - L1PB2 LINE L1 -7 6144 5838 382 63 16 16 chr5 116500549 116500612 -83129538 + (TA)n Simple_repeat Simple_repeat 2 64 0 9493 159 44 20 chr5 116500612 116501956 -83128194 - L1PB2 LINE L1 -313 5838 4528 183 42 0 0 chr5 116501956 116501980 -83128170 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 9493 159 44 20 chr5 116501980 116502207 -83127943 - L1PB2 LINE L1 -1623 4528 4308 2330 107 0 0 chr5 116502207 116502515 -83127635 - AluSc SINE Alu -1 308 1 9493 159 44 20 chr5 116502515 116503418 -83126732 - L1PB2 LINE L1 -1843 4308 3289 23 54 0 0 chr5 116503606 116503643 -83126507 + AT_rich Low_complexity Low_complexity 1 37 0 2713 10 0 0 chr5 116503649 116503957 -83126193 - L1HS LINE L1 0 6155 5848 232 267 0 40 chr5 116504228 116504303 -83125847 + MLT1L LTR MaLR 3 74 -541 322 287 101 38 chr5 116504332 116504569 -83125581 + MLT1L LTR MaLR 304 555 -60 1273 140 48 5 chr5 116504610 116504817 -83125333 - AluSg/x SINE Alu -11 301 86 369 248 83 0 chr5 116505734 116505843 -83124307 - Charlie1 DNA MER1_type 0 2761 2644 241 250 0 104 chr5 116505862 116505958 -83124192 - Charlie1 DNA MER1_type -2674 87 2 207 232 0 0 chr5 116507908 116507964 -83122186 + (CA)n Simple_repeat Simple_repeat 2 57 0 400 246 41 33 chr5 116508110 116508232 -83121918 + L2 LINE L2 3191 3313 0 240 35 0 0 chr5 116508577 116508606 -83121544 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 745 192 93 23 chr5 116509691 116509863 -83120287 - MER5A DNA MER1_type -5 184 1 1151 178 216 24 chr5 116510945 116511361 -83118789 - LTR54B LTR ERV1 -2 496 1 1340 211 105 54 chr5 116511371 116511927 -83118223 - LTR24B LTR ERV1 -1 634 2 896 229 103 5 chr5 116512369 116512583 -83117567 - MER8 DNA MER2_type -4 235 1 441 287 104 40 chr5 116513142 116513621 -83116529 + L1MC/D LINE L1 5259 5757 -450 183 217 50 83 chr5 116514116 116514176 -83115974 - L3b LINE CR1 -136 1447 1390 255 93 0 0 chr5 116514812 116514855 -83115295 + (A)n Simple_repeat Simple_repeat 1 43 0 184 333 25 0 chr5 116515198 116515279 -83114871 + MIR3 SINE MIR 118 200 -8 758 166 0 36 chr5 116515561 116515700 -83114450 - AluJo SINE Alu -178 134 1 1138 195 0 0 chr5 116516707 116516912 -83113238 - MER3 DNA MER1_type -4 205 1 1936 125 29 0 chr5 116519635 116519916 -83110234 - AluSx SINE Alu -19 293 5 201 344 104 31 chr5 116521023 116521119 -83109031 + L2 LINE L2 3136 3238 -34 22 0 0 0 chr5 116522280 116522302 -83107848 + AT_rich Low_complexity Low_complexity 1 22 0 27 62 0 0 chr5 116523007 116523055 -83107095 + AT_rich Low_complexity Low_complexity 1 48 0 202 290 74 68 chr5 116523189 116523351 -83106799 - MIR3 SINE MIR -11 197 35 396 325 189 0 chr5 116525024 116525230 -83104920 - MIR SINE MIR -7 255 11 232 294 98 0 chr5 116525654 116525746 -83104404 - MIR SINE MIR -10 252 152 22 56 0 0 chr5 116526446 116526482 -83103668 + AT_rich Low_complexity Low_complexity 1 36 0 2067 126 3 23 chr5 116526506 116526816 -83103334 + AluSx SINE Alu 1 304 -8 486 215 104 43 chr5 116527271 116527434 -83102716 + MIR SINE MIR 64 236 -26 2314 149 56 20 chr5 116528741 116529150 -83101000 + MSTC LTR MaLR 4 427 -1 347 149 14 0 chr5 116529700 116529774 -83100376 + (TA)n Simple_repeat Simple_repeat 2 76 0 535 277 87 35 chr5 116533918 116534149 -83096001 + MIR SINE MIR 19 261 -1 2869 203 63 7 chr5 116534375 116534472 -83095678 + L1M4 LINE L1 4256 4346 -1800 316 20 41 20 chr5 116534472 116534521 -83095629 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 2869 203 63 7 chr5 116534521 116535200 -83094950 + L1M4 LINE L1 4346 5090 -1056 198 387 40 0 chr5 116535505 116535580 -83094570 - L2 LINE L2 -18 3295 3218 544 101 18 73 chr5 116535615 116535724 -83094426 - L1MA8 LINE L1 -4 6287 6185 363 330 92 5 chr5 116535920 116536105 -83094045 - L2 LINE L2 -458 2856 2656 22 94 0 0 chr5 116536845 116536909 -83093241 + AT_rich Low_complexity Low_complexity 1 64 0 254 300 122 11 chr5 116539606 116539696 -83090454 - L2 LINE L2 -21 3292 3193 25 0 0 0 chr5 116540750 116540775 -83089375 + AT_rich Low_complexity Low_complexity 1 25 0 197 149 21 43 chr5 116540966 116541013 -83089137 + L2 LINE L2 3267 3312 -1 1290 186 76 50 chr5 116541588 116541905 -83088245 + MER2 DNA MER2_type 2 326 -19 25 31 0 0 chr5 116542180 116542212 -83087938 + AT_rich Low_complexity Low_complexity 1 32 0 321 47 0 0 chr5 116543270 116543313 -83086837 + (A)n Simple_repeat Simple_repeat 1 43 0 595 275 50 16 chr5 116544488 116544725 -83085425 + LTR33 LTR ERVL 241 486 -37 27 0 0 0 chr5 116545762 116545789 -83084361 + AT_rich Low_complexity Low_complexity 1 27 0 183 307 140 35 chr5 116545915 116546029 -83084121 - L3 LINE CR1 -1 1576 1451 2204 113 0 0 chr5 116546029 116546322 -83083828 - AluSx SINE Alu -8 304 12 296 313 91 23 chr5 116546409 116546585 -83083565 - L3 LINE CR1 -253 1324 1137 1606 203 173 26 chr5 116546914 116546991 -83083159 + L1MC4 LINE L1 7074 7138 -904 1243 178 26 4 chr5 116546991 116547221 -83082929 - MER46A DNA MER2_type -1 235 1 1606 203 173 26 chr5 116547221 116547685 -83082465 + L1MC4 LINE L1 7138 7695 -347 1322 233 26 30 chr5 116548030 116548369 -83081781 - MER58B DNA MER1_type -1 340 3 700 243 90 6 chr5 116548376 116548553 -83081597 + MIR SINE MIR 69 260 -2 283 245 47 28 chr5 116549413 116549519 -83080631 - L2 LINE L2 -89 3224 3117 503 169 59 22 chr5 116550723 116550859 -83079291 + L1MC5 LINE L1 7611 7751 -210 42636 35 22 1 chr5 116551846 116557875 -83072275 + L1PA3 LINE L1 2 6155 0 463 246 36 66 chr5 116557901 116558068 -83072082 + L2 LINE L2 3140 3301 -12 654 287 38 45 chr5 116558275 116558564 -83071586 + MLT1I LTR MaLR 106 392 -17 190 267 0 0 chr5 116558765 116558810 -83071340 + L2 LINE L2 3228 3272 0 2155 100 0 17 chr5 116558883 116559174 -83070976 + AluSc SINE Alu 1 286 -23 2564 47 0 0 chr5 116559464 116559761 -83070389 + AluY SINE Alu 1 297 -14 880 179 122 144 chr5 116560058 116560461 -83069689 - MLT1A1 LTR MaLR -2 363 1 231 341 87 0 chr5 116560718 116560844 -83069306 - MLT1L LTR MaLR -78 537 401 407 252 206 7 chr5 116561377 116561532 -83068618 + MIR SINE MIR 71 256 -6 2854 263 72 31 chr5 116561780 116562877 -83067273 - L1MEc LINE L1 -4931 1465 324 225 259 147 56 chr5 116563043 116563186 -83066964 - MIR SINE MIR -3 259 104 365 230 235 40 chr5 116563755 116563955 -83066195 + L3 LINE CR1 624 862 -715 2415 72 0 3 chr5 116564294 116564599 -83065551 - AluY SINE Alu -7 304 1 25 31 0 0 chr5 116564970 116565002 -83065148 + AT_rich Low_complexity Low_complexity 1 32 0 209 398 44 0 chr5 116565289 116565402 -83064748 + L2 LINE L2 3138 3255 -17 194 303 180 0 chr5 116566961 116567050 -83063100 + L2 LINE L2 2960 3064 -208 202 286 57 43 chr5 116567139 116567209 -83062941 + L2 LINE L2 3243 3313 0 2259 93 38 0 chr5 116567837 116568127 -83062023 + AluSg SINE Alu 1 301 -9 849 248 46 34 chr5 116568275 116568513 -83061637 - MIR SINE MIR -16 246 6 217 268 14 28 chr5 116568732 116568803 -83061347 - MER5B DNA MER1_type -65 113 44 232 266 0 32 chr5 116574506 116574600 -83055550 + CT-rich Low_complexity Low_complexity 2 92 0 1160 294 65 18 chr5 116575611 116575995 -83054155 + LTR33 LTR ERVL 1 402 -119 351 235 0 12 chr5 116576007 116576088 -83054062 - MER94 DNA DNA -19 115 36 387 216 11 11 chr5 116576187 116576275 -83053875 + LTR33 LTR ERVL 434 521 0 2059 133 3 3 chr5 116577066 116577367 -83052783 - AluSx SINE Alu -10 302 2 1032 206 0 38 chr5 116577371 116577580 -83052570 + MER58A DNA MER1_type 24 224 0 22 56 0 0 chr5 116578491 116578527 -83051623 + AT_rich Low_complexity Low_complexity 1 36 0 1534 197 86 17 chr5 116578979 116579329 -83050821 - MLT1A2 LTR MaLR 0 374 1 1495 190 7 22 chr5 116579607 116579876 -83050274 - AluJo SINE Alu -33 279 15 246 239 0 14 chr5 116579936 116580007 -83050143 + L1MC4 LINE L1 7732 7801 -241 220 137 39 0 chr5 116580045 116580096 -83050054 + GA-rich Low_complexity Low_complexity 2 54 0 232 226 19 0 chr5 116580402 116580455 -83049695 + (TA)n Simple_repeat Simple_repeat 2 55 0 783 255 63 111 chr5 116580467 116581141 -83049009 - L1MC4a LINE L1 -1849 6028 5391 1620 89 27 13 chr5 116581141 116581366 -83048784 - MER30 DNA MER1_type -2 228 1 783 255 63 111 chr5 116581366 116581431 -83048719 - L1MC4a LINE L1 -2486 5391 5324 22 80 0 0 chr5 116581717 116581767 -83048383 + AT_rich Low_complexity Low_complexity 1 50 0 3703 245 65 48 chr5 116581875 116582061 -83048089 - L1MC4a LINE L1 -3904 2492 2311 1869 135 0 21 chr5 116582061 116582349 -83047801 - AluSx SINE Alu -24 288 7 3703 245 65 48 chr5 116582349 116583199 -83046951 - L1MC4a LINE L1 -4085 2311 1413 2135 47 0 87 chr5 116583199 116583498 -83046652 + AluY SINE Alu 34 306 -5 3703 245 65 48 chr5 116583498 116584187 -83045963 - L1MC4a LINE L1 -4983 1413 737 331 109 0 0 chr5 116584253 116584299 -83045851 + L1P3 LINE L1 582 627 -5248 991 268 78 0 chr5 116584319 116584625 -83045525 - L1MC4a LINE L1 -5663 733 404 401 245 20 41 chr5 116584625 116584723 -83045427 + MIR SINE MIR 7 102 -160 922 210 68 5 chr5 116584723 116584928 -83045222 + Tigger7 DNA MER2_type 1 218 -2269 26049 135 10 12 chr5 116584928 116586229 -83043921 + L1PA8A LINE L1 1086 2389 -4057 2137 106 0 59 chr5 116586229 116586551 -83043599 + AluSc SINE Alu 1 303 -6 26049 135 10 12 chr5 116586551 116590614 -83039536 + L1PA8A LINE L1 2389 6440 -6 25 0 0 0 chr5 116590614 116590639 -83039511 + AT_rich Low_complexity Low_complexity 1 25 0 225 277 85 64 chr5 116590836 116590977 -83039173 + MLT1J LTR MaLR 1 144 -367 313 280 40 10 chr5 116591851 116591951 -83038199 + MIR3 SINE MIR 105 207 -1 1780 136 0 4 chr5 116591967 116592232 -83037918 + AluSq SINE Alu 49 312 -1 1012 261 37 0 chr5 116592396 116592637 -83037513 - MIR SINE MIR -10 252 3 193 352 9 0 chr5 116592777 116592882 -83037268 - MIR SINE MIR -7 255 150 347 368 7 13 chr5 116592954 116593109 -83037041 - MIR SINE MIR -107 155 2 396 209 99 0 chr5 116593259 116593350 -83036800 + MER5A DNA MER1_type 10 109 -80 3518 17 0 0 chr5 116593401 116593804 -83036346 + L1PA2 LINE L1 5749 6151 -4 2343 59 28 0 chr5 116593926 116594213 -83035937 - AluY SINE Alu -16 295 1 236 394 20 31 chr5 116597719 116597973 -83032177 + L3 LINE CR1 1212 1462 -115 26 50 0 0 chr5 116598069 116598109 -83032041 + AT_rich Low_complexity Low_complexity 1 40 0 3372 128 27 21 chr5 116598294 116598818 -83031332 + MER1A DNA MER1_type 1 527 0 201 237 17 34 chr5 116599203 116599262 -83030888 - L2 LINE L2 -1 3271 3214 12027 154 39 20 chr5 116599677 116600471 -83029679 + Tigger1 DNA MER2_type 20 798 -1620 2058 146 10 0 chr5 116600471 116600779 -83029371 + AluSx SINE Alu 1 311 -1 12027 154 39 20 chr5 116600779 116602236 -83027914 + Tigger1 DNA MER2_type 798 2313 -105 7610 27 0 0 chr5 116602274 116603549 -83026601 - L1PA3 LINE L1 -3 6152 4877 261 167 21 0 chr5 116603549 116603597 -83026553 + Tigger1 DNA MER2_type 2301 2349 -69 1690 185 7 17 chr5 116604022 116604319 -83025831 - AluJo SINE Alu -18 294 1 327 272 52 88 chr5 116604326 116604677 -83025473 - L1ME LINE L1 -299 5822 5492 3248 160 22 30 chr5 116604742 116605386 -83024764 - L1MB2 LINE L1 -4 6167 5529 5402 172 21 23 chr5 116605386 116606551 -83023599 + L1MA10 LINE L1 5173 6331 -3 21 0 0 0 chr5 116606797 116606818 -83023332 + AT_rich Low_complexity Low_complexity 1 21 0 42838 48 7 1 chr5 116606899 116613018 -83017132 - L1PA4 LINE L1 -3 6152 2 1013 273 89 48 chr5 116613466 116614053 -83016097 + L1MC4a LINE L1 5314 5924 -1884 306 337 10 0 chr5 116614086 116614184 -83015966 + MER94 DNA DNA 23 121 -13 696 123 6 45 chr5 116614184 116614363 -83015787 + (TCTA)n Simple_repeat Simple_repeat 2 173 0 2250 155 41 7 chr5 116614805 116615217 -83014933 + MSTC LTR MaLR 1 426 -2 2161 118 0 3 chr5 116615359 116615656 -83014494 - AluSg SINE Alu -14 296 1 246 268 45 45 chr5 116615762 116615874 -83014276 - MER103 DNA DNA -46 120 9 1430 193 70 48 chr5 116616487 116616695 -83013455 - MLT1A1 LTR MaLR 0 365 163 396 55 0 0 chr5 116616695 116616750 -83013400 + (TATG)n Simple_repeat Simple_repeat 2 56 0 2124 99 0 21 chr5 116616751 116617035 -83013115 - AluY SINE Alu -31 280 3 1430 193 70 48 chr5 116617035 116617181 -83012969 - MLT1A1 LTR MaLR -201 164 1 490 270 122 48 chr5 116617433 116617663 -83012487 + MIR SINE MIR 16 262 0 359 333 164 18 chr5 116618956 116619346 -83010804 + L2 LINE L2 2826 3272 0 818 267 34 6 chr5 116619752 116619928 -83010222 + MER5A DNA MER1_type 9 189 0 186 224 0 0 chr5 116621076 116621125 -83009025 + CT-rich Low_complexity Low_complexity 4 52 0 24 0 0 0 chr5 116621636 116621660 -83008490 + AT_rich Low_complexity Low_complexity 1 24 0 311 324 110 14 chr5 116621907 116622052 -83008098 - L1ME LINE L1 -320 5850 5692 338 332 74 35 chr5 116622066 116622356 -83007794 - L1MEc LINE L1 -814 1762 1447 204 270 6 55 chr5 116622522 116622685 -83007465 + T-rich Low_complexity Low_complexity 5 159 0 843 208 36 0 chr5 116623896 116624064 -83006086 - FAM SINE Alu -1 174 1 234 194 301 11 chr5 116624381 116624474 -83005676 + MIR SINE MIR 66 185 -77 26 0 0 0 chr5 116624520 116624546 -83005604 + AT_rich Low_complexity Low_complexity 1 26 0 229 292 28 21 chr5 116624986 116625130 -83005020 - L1ME LINE L1 -273 5848 5704 312 27 0 0 chr5 116625830 116625867 -83004283 + (TG)n Simple_repeat Simple_repeat 2 38 0 445 248 74 0 chr5 116626896 116627017 -83003133 - MIR SINE MIR -44 218 89 200 147 0 0 chr5 116628003 116628037 -83002113 + L2 LINE L2 3276 3309 -4 182 315 120 11 chr5 116628389 116628481 -83001669 + MIR3 SINE MIR 74 175 -33 2268 58 20 0 chr5 116628644 116628936 -83001214 + L1PA7 LINE L1 5851 6148 -6 216 394 24 36 chr5 116629806 116629971 -83000179 + L2 LINE L2 3107 3269 -3 1385 268 43 47 chr5 116630507 116631059 -82999091 - L1M3f LINE L1 -4240 1088 539 27 73 0 0 chr5 116632016 116632071 -82998079 + AT_rich Low_complexity Low_complexity 1 55 0 312 311 142 16 chr5 116632433 116632799 -82997351 + L1M4 LINE L1 3590 4001 -2145 251 371 79 24 chr5 116633256 116633688 -82996462 - L2 LINE L2 -1551 1763 1303 3052 80 2 2 chr5 116633688 116634099 -82996051 + L1PA7 LINE L1 5742 6152 -2 251 371 79 24 chr5 116634099 116634124 -82996026 - L2 LINE L2 -2011 1303 1281 213 333 0 0 chr5 116634214 116634280 -82995870 + CT-rich Low_complexity Low_complexity 1 66 0 248 318 48 16 chr5 116635461 116635587 -82994563 - L2 LINE L2 -2577 737 608 2065 139 0 3 chr5 116636856 116637150 -82993000 + AluSx SINE Alu 3 295 -17 23 0 0 0 chr5 116637263 116637286 -82992864 + AT_rich Low_complexity Low_complexity 1 23 0 2175 65 55 3 chr5 116637319 116637609 -82992541 - AluY SINE Alu -6 305 1 927 252 37 4 chr5 116638887 116639133 -82991017 + MIR SINE MIR 9 262 0 278 332 142 54 chr5 116639399 116639604 -82990546 + L2 LINE L2 3045 3267 -5 1788 182 28 31 chr5 116639693 116640045 -82990105 - MLT1A1 LTR MaLR -4 361 11 3122 209 29 13 chr5 116640060 116640692 -82989458 - MLT1A1-int LTR MaLR -2 1733 1092 1601 224 23 12 chr5 116640695 116641038 -82989112 + MLT1A1 LTR MaLR 17 363 -2 2211 112 0 0 chr5 116641678 116641974 -82988176 - AluSg SINE Alu -14 296 1 437 352 123 27 chr5 116641987 116642436 -82987714 + L2 LINE L2 1876 2367 -947 3258 133 30 13 chr5 116642842 116643421 -82986729 - LTR10E LTR ERV1 0 633 1 207 318 12 0 chr5 116643638 116643723 -82986427 + T-rich Low_complexity Low_complexity 4 89 0 2409 161 5 2 chr5 116643937 116644366 -82985784 + L1MA4 LINE L1 5855 6284 -16 1693 206 43 43 chr5 116644584 116645051 -82985099 - MLT1C LTR MaLR 0 467 1 771 267 140 84 chr5 116645584 116646134 -82984016 + MLT1G LTR MaLR 10 590 0 264 318 88 6 chr5 116646151 116646321 -82983829 - L1ME LINE L1 -305 5816 5633 36 40 0 0 chr5 116646646 116646696 -82983454 + AT_rich Low_complexity Low_complexity 1 50 0 1308 216 7 102 chr5 116646884 116647287 -82982863 - MLT1A1 LTR MaLR 0 365 1 332 350 28 22 chr5 116647980 116648160 -82981990 - L1ME LINE L1 -2374 3772 3592 533 286 61 6 chr5 116648436 116648658 -82981492 + MIR SINE MIR 32 261 -1 31 44 0 0 chr5 116648855 116648900 -82981250 + AT_rich Low_complexity Low_complexity 1 45 0 2579 95 18 32 chr5 116649290 116649691 -82980459 - L1PA13 LINE L1 0 6163 5769 * 6068 90 15 0 chr5 116649688 116650990 -82979160 - L1PA11 LINE L1 0 6174 4871 41606 44 27 2 chr5 116651014 116657017 -82973133 - L1PA5 LINE L1 -2 6152 5 2783 218 55 25 chr5 116657021 116657783 -82972367 - L1 LINE L1 -1386 4996 4209 3163 50 17 2 chr5 116657783 116658187 -82971963 - L1PA3 LINE L1 -1 6154 5745 311 0 0 0 chr5 116658187 116658223 -82971927 + L1P1 LINE L1 5646 5681 -474 5864 215 40 20 chr5 116659991 116661602 -82968548 - L1 LINE L1 -2212 4170 2529 225 143 16 95 chr5 116661625 116661688 -82968462 - L1MC4 LINE L1 -1340 6702 6645 * 1653 260 133 35 chr5 116661675 116662731 -82967419 - L1 LINE L1 -3857 2525 1365 23 68 0 0 chr5 116663377 116663421 -82966729 + AT_rich Low_complexity Low_complexity 1 44 0 420 317 102 32 chr5 116663533 116663817 -82966333 - L2 LINE L2 0 3313 3010 1685 139 4 7 chr5 116663978 116664251 -82965899 - L1MA8 LINE L1 -423 5868 5597 449 167 10 0 chr5 116664255 116664351 -82965799 + L1MA8 LINE L1 6195 6291 0 264 353 12 12 chr5 116664819 116664992 -82965158 + CT-rich Low_complexity Low_complexity 1 173 0 2067 128 50 39 chr5 116665242 116665602 -82964548 + THE1B LTR MaLR 1 364 0 11340 101 7 2 chr5 116665602 116667174 -82962976 + THE1B-int LTR MaLR 1 1580 0 2020 116 48 67 chr5 116667174 116667545 -82962605 + THE1B LTR MaLR 1 364 0 900 305 122 28 chr5 116668496 116669207 -82960943 - L2 LINE L2 -1145 2169 1392 189 246 18 35 chr5 116669248 116669305 -82960845 - L3 LINE CR1 -861 716 661 * 269 233 47 35 chr5 116669291 116669377 -82960773 - L2 LINE L2 0 3272 3186 4323 120 27 3 chr5 116669716 116670410 -82959740 - L1PB4 LINE L1 -190 5966 5256 23 54 0 0 chr5 116670804 116670841 -82959309 + AT_rich Low_complexity Low_complexity 1 37 0 243 0 0 0 chr5 116671181 116671208 -82958942 + (T)n Simple_repeat Simple_repeat 1 27 0 28 0 0 0 chr5 116673379 116673407 -82956743 + AT_rich Low_complexity Low_complexity 1 28 0 259 344 0 10 chr5 116674150 116674246 -82955904 + ERVL LTR ERVL 2613 2707 -3057 520 275 77 16 chr5 116675152 116675495 -82954655 - MLT1J LTR MaLR -94 417 11 324 291 51 8 chr5 116675723 116675840 -82954310 + L3 LINE CR1 962 1083 -494 586 296 154 39 chr5 116677501 116677839 -82952311 + LTR33 LTR ERVL 21 397 -124 291 291 211 16 chr5 116678530 116678740 -82951410 + MIR SINE MIR 15 261 -1 22 0 0 0 chr5 116679268 116679290 -82950860 + AT_rich Low_complexity Low_complexity 1 22 0 242 241 13 25 chr5 116679746 116679825 -82950325 - MLT1K LTR MaLR -1 587 510 180 0 0 0 chr5 116679947 116679967 -82950183 + (T)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr5 116680439 116680461 -82949689 + AT_rich Low_complexity Low_complexity 1 22 0 190 353 25 33 chr5 116680685 116680807 -82949343 + MIR SINE MIR 19 139 -69 2118 160 16 16 chr5 116681403 116681778 -82948372 + THE1C LTR MaLR 1 375 0 1536 66 5 0 chr5 116682237 116682435 -82947715 - L1PA7 LINE L1 -7 6147 5949 1294 284 43 16 chr5 116682681 116683191 -82946959 + L2 LINE L2 2782 3311 -2 906 303 77 13 chr5 116683568 116683958 -82946192 + LTR33 LTR ERVL 45 459 -62 2343 104 3 0 chr5 116683971 116684270 -82945880 + AluSp SINE Alu 1 300 -13 6747 152 188 25 chr5 116684933 116686442 -82943708 - MER52A LTR ERV1 0 1755 1 1326 301 99 18 chr5 116686747 116687548 -82942602 - L2 LINE L2 -77 3236 2371 2085 219 114 20 chr5 116687549 116688102 -82942048 - MER77 LTR ERV1 0 605 1 508 300 227 12 chr5 116688103 116688433 -82941717 - L2 LINE L2 -942 2372 1972 2132 108 4 0 chr5 116688434 116688712 -82941438 - AluY SINE Alu -32 279 1 224 370 7 45 chr5 116688719 116688873 -82941277 - L2 LINE L2 -1614 1700 1553 2501 64 0 0 chr5 116689206 116689503 -82940647 - AluY SINE Alu -14 297 1 610 263 62 24 chr5 116690649 116690858 -82939292 + MIR SINE MIR 40 256 -6 192 349 108 0 chr5 116691333 116691416 -82938734 + MIR3 SINE MIR 67 158 -50 220 376 24 0 chr5 116691437 116691522 -82938628 - MIR SINE MIR -85 123 37 875 133 51 0 chr5 116691580 116691738 -82938412 - MER50 LTR ERV1 -23 711 546 3223 146 21 16 chr5 116696486 116697061 -82933089 - MER50 LTR ERV1 -156 578 1 1213 124 12 0 chr5 116699519 116699688 -82930462 + AluSg/x SINE Alu 128 298 -12 25 0 0 0 chr5 116701651 116701676 -82928474 + AT_rich Low_complexity Low_complexity 1 25 0 2188 216 107 45 chr5 116701938 116702665 -82927485 + L1PA11 LINE L1 7 778 -6803 * 41168 50 4 10 chr5 116702662 116708851 -82921299 - L1PA4 LINE L1 0 6155 6 15815 166 73 86 chr5 116708855 116713332 -82916818 + L1PA11 LINE L1 766 5896 -1716 2505 91 0 0 chr5 116713332 116713641 -82916509 + AluSx SINE Alu 3 311 -1 15815 166 73 86 chr5 116713641 116715336 -82914814 + L1PA11 LINE L1 5896 7612 0 910 159 60 9 chr5 116715340 116715573 -82914577 + Charlie1 DNA MER1_type 2420 2664 -97 1873 163 41 20 chr5 116715579 116715972 -82914178 + MER95 LTR ERV 7 407 -24 21 36 0 0 chr5 116717458 116717486 -82912664 + AT_rich Low_complexity Low_complexity 1 28 0 646 327 50 23 chr5 116717814 116718114 -82912036 + L3 LINE CR1 517 824 -753 447 333 97 52 chr5 116718714 116719159 -82910991 - L2 LINE L2 0 3272 2808 3875 208 130 106 chr5 116719728 116720977 -82909173 + L1MD3 LINE L1 6020 7467 -528 597 197 16 0 chr5 116720977 116721099 -82909051 + MLT1F1 LTR MaLR 8 131 -436 3875 208 130 106 chr5 116721099 116721641 -82908509 + L1MD3 LINE L1 7467 7995 0 3083 153 40 5 chr5 116723848 116724424 -82905726 + L1MC3 LINE L1 7169 7764 -21 247 327 75 65 chr5 116725223 116725501 -82904649 + L2 LINE L2 3030 3310 -3 214 277 0 0 chr5 116725763 116725810 -82904340 + L2 LINE L2 3217 3263 -9 383 0 21 0 chr5 116726472 116726519 -82903631 + (CA)n Simple_repeat Simple_repeat 1 48 0 237 282 26 13 chr5 116727133 116727211 -82902939 - MLT1L LTR MaLR -536 79 1 508 285 67 31 chr5 116727690 116727883 -82902267 - MIR SINE MIR 0 262 63 1986 146 104 3 chr5 116728177 116728533 -82901617 + L1PA15 LINE L1 5774 6165 0 1695 184 0 31 chr5 116728601 116728922 -82901228 + AluJb SINE Alu 1 311 -1 14508 142 31 26 chr5 116729063 116729683 -82900467 + Tigger2 DNA MER2_type 104 719 -1999 2360 166 34 2 chr5 116729683 116730094 -82900056 + MSTB LTR MaLR 1 424 -2 14508 142 31 26 chr5 116730094 116732072 -82898078 + Tigger2 DNA MER2_type 719 2715 -3 215 31 31 0 chr5 116732825 116732857 -82897293 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 281 262 183 0 chr5 116732875 116733001 -82897149 + L1MD2 LINE L1 6194 6342 -17 813 196 12 12 chr5 116733900 116734063 -82896087 + FRAM SINE Alu 2 164 -12 11860 58 4 3 chr5 116734574 116734591 -82895559 + L1P LINE L1 2432 2447 -3699 10206 61 1 1 chr5 116734591 116736679 -82893471 - L1PA5 LINE L1 0 6154 4065 11860 58 4 3 chr5 116736679 116738295 -82891855 + L1PA5 LINE L1 2447 4067 -2079 266 292 212 9 chr5 116738478 116738591 -82891559 - MIR SINE MIR -97 165 30 1003 222 78 129 chr5 116739709 116740196 -82889954 + LTR40b LTR ERVL 1 462 0 242 311 87 10 chr5 116740268 116740371 -82889779 - L2 LINE L2 -216 3056 2946 310 315 68 43 chr5 116740513 116740675 -82889475 - MIR SINE MIR -48 214 49 2339 153 7 7 chr5 116742210 116742635 -82887515 - L1M2 LINE L1 -577 5735 5311 730 241 64 35 chr5 116742977 116743180 -82886970 - MER58A DNA MER1_type 0 224 16 579 274 150 76 chr5 116743312 116743666 -82886484 - L2 LINE L2 -4 3309 2930 21 0 0 0 chr5 116743706 116743727 -82886423 + AT_rich Low_complexity Low_complexity 1 21 0 234 239 0 0 chr5 116743735 116743802 -82886348 - L1ME2 LINE L1 -2 6162 6096 185 0 40 0 chr5 116744087 116744112 -82886038 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1667 149 28 28 chr5 116744115 116744397 -82885753 - AluJo SINE Alu -30 282 1 368 224 102 7 chr5 116744455 116744602 -82885548 + MER33 DNA MER1_type 6 166 -158 2437 67 0 0 chr5 116744627 116744924 -82885226 - AluY SINE Alu -14 297 1 405 307 43 18 chr5 116745235 116745398 -82884752 - MIR SINE MIR 0 262 96 540 241 62 44 chr5 116746281 116746696 -82883454 + L1MEd LINE L1 1103 1558 -4838 25 31 0 0 chr5 116746858 116746890 -82883260 + AT_rich Low_complexity Low_complexity 1 32 0 656 271 128 43 chr5 116747123 116747634 -82882516 + L1MEd LINE L1 1998 2501 -3714 2155 150 21 0 chr5 116747649 116748035 -82882115 - MER57A LTR ERV1 -9 394 1 1651 104 16 8 chr5 116748035 116748284 -82881866 - MER57A-int LTR ERV1 0 7537 7287 4221 99 155 113 chr5 116748284 116749794 -82880356 + pTR5 LTR ERV1 743 2438 0 731 100 23 31 chr5 116749809 116749939 -82880211 - LTR54B LTR ERV1 -367 131 3 28695 105 11 33 chr5 116749951 116755788 -82874362 + L1PA7 LINE L1 443 6142 -12 27162 104 23 13 chr5 116755795 116757177 -82872973 - MER57A-int LTR ERV1 -393 7144 5777 2787 19 0 0 chr5 116757177 116757487 -82872663 + AluYa5 SINE Alu 1 310 -1 27162 104 23 13 chr5 116757487 116760409 -82869741 - MER57A-int LTR ERV1 -1760 5777 2797 7615 143 24 17 chr5 116760400 116761749 -82868401 - MER57A-int LTR ERV1 -5521 2016 659 * 372 123 77 0 chr5 116761772 116761837 -82868313 - AluS SINE Alu -3 299 230 3471 127 46 83 chr5 116761837 116762330 -82867820 - MER57A-int LTR ERV1 -6864 673 212 1785 146 3 42 chr5 116762330 116762618 -82867532 + AluSq SINE Alu 11 287 -26 3471 127 46 83 chr5 116762618 116762823 -82867327 - MER57A-int LTR ERV1 -7325 212 1 2111 165 23 0 chr5 116762823 116763217 -82866933 - MER57A LTR ERV1 0 403 1 250 289 146 33 chr5 116763217 116763553 -82866597 + L1MEd LINE L1 2524 2897 -3318 1849 180 7 0 chr5 116763554 116763859 -82866291 + AluSx SINE Alu 3 309 -3 6416 152 12 12 chr5 116763937 116765951 -82864199 + L1MA1 LINE L1 4290 6302 0 263 224 13 13 chr5 116766001 116766077 -82864073 + L1MEd LINE L1 3012 3087 -3128 381 310 50 30 chr5 116766151 116766351 -82863799 + L1ME LINE L1 147 350 -5855 382 294 20 26 chr5 116766379 116766532 -82863618 + L1ME LINE L1 1281 1432 -4964 774 189 55 37 chr5 116766570 116766734 -82863416 + AluSx SINE Alu 1 167 -145 2093 160 59 29 chr5 116766736 116767249 -82862901 + MLT2A2 LTR ERVL 1 554 0 560 112 180 0 chr5 116767255 116767344 -82862806 + AluSx SINE Alu 169 273 -37 673 105 0 32 chr5 116767347 116767471 -82862679 + (GGAA)n Simple_repeat Simple_repeat 3 122 0 276 337 67 48 chr5 116768120 116768580 -82861570 - L2 LINE L2 -1096 2218 1750 387 0 0 0 chr5 116769892 116769935 -82860215 + (CA)n Simple_repeat Simple_repeat 1 43 0 437 176 40 81 chr5 116769941 116769959 -82860191 + L1MA9 LINE L1 6171 6188 -124 2708 77 0 19 chr5 116769959 116770321 -82859829 + THE1A LTR MaLR 1 355 0 437 176 40 81 chr5 116770321 116770450 -82859700 + L1MA9 LINE L1 6188 6312 0 6006 94 13 0 chr5 116770515 116771726 -82858424 - L1PA10 LINE L1 -15 6153 4940 1424 193 45 126 chr5 116772098 116772605 -82857545 - L1MD2 LINE L1 -1 6241 5776 26 30 0 0 chr5 116774734 116774767 -82855383 + AT_rich Low_complexity Low_complexity 1 33 0 567 169 7 96 chr5 116777719 116777855 -82852295 + FLAM_C SINE Alu 1 124 -19 332 304 176 20 chr5 116778579 116778783 -82851367 + MIR SINE MIR 21 256 -6 25 65 0 0 chr5 116778817 116778863 -82851287 + AT_rich Low_complexity Low_complexity 1 46 0 306 125 0 0 chr5 116778968 116779016 -82851134 + (CA)n Simple_repeat Simple_repeat 2 49 0 303 313 78 12 chr5 116779016 116779182 -82850968 + L1ME4a LINE L1 5936 6112 -9 209 213 38 12 chr5 116779184 116779264 -82850886 + (TA)n Simple_repeat Simple_repeat 1 82 0 1150 238 68 15 chr5 116780803 116781127 -82849023 + MLT2C1 LTR ERVL 1 341 -56 38 68 0 0 chr5 116781127 116781200 -82848950 + AT_rich Low_complexity Low_complexity 1 73 0 312 241 42 0 chr5 116781220 116781386 -82848764 + (TA)n Simple_repeat Simple_repeat 1 173 0 25 0 0 0 chr5 116781387 116781412 -82848738 + AT_rich Low_complexity Low_complexity 1 25 0 193 163 41 0 chr5 116781460 116781509 -82848641 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 2259 89 0 3 chr5 116785068 116785372 -82844778 + AluY SINE Alu 1 303 -8 1267 149 0 40 chr5 116785384 116785612 -82844538 + AluSg SINE Alu 3 221 -89 1848 145 10 7 chr5 116788322 116788612 -82841538 - AluSx SINE Alu -21 291 1 981 137 33 28 chr5 116789524 116789706 -82840444 - L1MB4 LINE L1 -8 6172 5990 335 313 40 0 chr5 116790037 116790136 -82840014 - MIR SINE MIR -79 183 81 679 182 0 0 chr5 116790210 116790320 -82839830 + FRAM SINE Alu 46 155 -21 182 400 30 0 chr5 116790338 116790438 -82839712 + MIR3 SINE MIR 55 157 -51 322 159 29 14 chr5 116791193 116791262 -82838888 - MER67D LTR ERV1 0 514 445 257 221 15 0 chr5 116791422 116791490 -82838660 - MER67D LTR ERV1 -140 374 306 1250 173 35 72 chr5 116791536 116791854 -82838296 - MER67D LTR ERV1 -204 310 5 542 268 83 57 chr5 116794126 116794354 -82835796 + MIR SINE MIR 29 262 0 287 356 69 18 chr5 116794735 116795010 -82835140 - L2 LINE L2 -372 2942 2654 195 258 62 55 chr5 116795128 116795256 -82834894 - L2 LINE L2 -1218 2096 1968 471 314 116 6 chr5 116795959 116796131 -82834019 + MIR SINE MIR 20 210 -52 24 32 0 0 chr5 116796438 116796469 -82833681 + AT_rich Low_complexity Low_complexity 1 31 0 224 167 0 21 chr5 116796510 116796558 -82833592 + (TA)n Simple_repeat Simple_repeat 1 47 0 4592 138 1 15 chr5 116796694 116797489 -82832661 + L1PA13 LINE L1 5380 6163 0 221 275 29 0 chr5 116797711 116797780 -82832370 - L3 LINE CR1 -162 1415 1345 202 344 0 33 chr5 116798966 116799056 -82831094 - L2 LINE L2 0 3272 3186 213 178 0 0 chr5 116800195 116800240 -82829910 + CT-rich Low_complexity Low_complexity 4 48 0 2532 65 0 0 chr5 116800561 116800870 -82829280 + AluY SINE Alu 1 309 -2 24 0 0 0 chr5 116803540 116803564 -82826586 + AT_rich Low_complexity Low_complexity 1 24 0 1799 174 46 8 chr5 116803593 116803960 -82826190 + L1M4c LINE L1 19 399 -5985 2919 180 24 12 chr5 116804005 116804121 -82826029 - L1 LINE L1 -2542 5023 4910 1693 176 9 43 chr5 116804121 116804444 -82825706 - AluJb SINE Alu 0 312 1 2919 180 24 12 chr5 116804444 116805004 -82825146 - L1 LINE L1 -2655 4910 4339 * 12328 173 93 6 chr5 116804999 116807481 -82822669 - L1 LINE L1 -4852 2713 17 2090 143 3 0 chr5 116808743 116809044 -82821106 - AluSx SINE Alu -10 302 1 2495 64 3 10 chr5 116809179 116809490 -82820660 + AluY SINE Alu 1 309 -2 722 303 36 24 chr5 116809844 116810095 -82820055 + MIR SINE MIR 1 254 -8 2819 242 45 19 chr5 116811533 116812594 -82817556 - L1ME1 LINE L1 -24 6142 5054 2258 93 0 13 chr5 116813041 116813341 -82816809 + AluY SINE Alu 1 296 -15 2284 112 0 0 chr5 116813955 116814251 -82815899 - AluSx SINE Alu -16 296 1 191 353 30 75 chr5 116815643 116815776 -82814374 - L2 LINE L2 -2 3270 3144 2285 97 3 10 chr5 116815804 116816115 -82814035 + AluSq SINE Alu 1 309 -4 1401 199 27 12 chr5 116816225 116816481 -82813669 + AluJo SINE Alu 1 260 -52 292 151 78 69 chr5 116817629 116817752 -82812398 + MER69 DNA AcHobo 47 2513 -13 22 0 0 0 chr5 116819897 116819919 -82810231 + AT_rich Low_complexity Low_complexity 1 22 0 9314 211 44 22 chr5 116820253 116820389 -82809761 - L1MB3 LINE L1 -60 6359 6227 1989 146 143 11 chr5 116820389 116820767 -82809383 + MSTA LTR MaLR 1 428 0 9314 211 44 22 chr5 116820767 116821127 -82809023 - L1MB3 LINE L1 -192 6227 5876 2756 69 11 0 chr5 116821127 116821490 -82808660 - L1PA8 LINE L1 -1 6171 5805 9314 211 44 22 chr5 116821490 116822045 -82808105 - L1MB3 LINE L1 -543 5876 5334 646 38 0 0 chr5 116822045 116822125 -82808025 + MADE1 DNA Mariner 1 80 0 9314 211 44 22 chr5 116822125 116822265 -82807885 - L1MB3 LINE L1 -1085 5334 5198 1422 154 55 40 chr5 116822265 116822590 -82807560 - L1MA7 LINE L1 -1 6290 5961 9314 211 44 22 chr5 116822590 116827359 -82802791 - L1MB3 LINE L1 -1221 5198 216 1248 185 91 0 chr5 116878217 116878514 -82751636 + MER33 DNA MER1_type 1 324 0 559 234 0 14 chr5 116878760 116878901 -82751249 + L1MB7 LINE L1 6036 6174 -10 1730 152 13 26 chr5 116880203 116880505 -82749645 + AluJb SINE Alu 1 298 -14 22 0 0 0 chr5 116880990 116881012 -82749138 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr5 116882006 116882043 -82748107 + AT_rich Low_complexity Low_complexity 1 37 0 2215 138 0 0 chr5 116882990 116883302 -82746848 + AluSx SINE Alu 1 312 0 2227 96 3 0 chr5 116883315 116883607 -82746543 + AluSp SINE Alu 1 293 -20 499 256 100 60 chr5 116883909 116884152 -82745998 + L1ME3 LINE L1 4782 5014 -1132 2303 96 0 16 chr5 116884152 116884466 -82745684 + AluSc SINE Alu 1 309 0 499 256 100 60 chr5 116884466 116884753 -82745397 + L1ME3 LINE L1 5014 5333 -813 278 281 118 53 chr5 116884974 116885202 -82744948 + L1ME3 LINE L1 5648 5890 -272 183 255 20 0 chr5 116885556 116885607 -82744543 + L2 LINE L2 2446 2497 -817 259 211 179 32 chr5 116885612 116885707 -82744443 + MIR SINE MIR 154 262 0 275 350 60 17 chr5 116885893 116886010 -82744140 + L2 LINE L2 2940 3061 -211 398 278 68 5 chr5 116886314 116886519 -82743631 - L1ME4a LINE L1 -265 5856 5639 243 250 0 0 chr5 116886650 116886710 -82743440 - L1ME4a LINE L1 -501 5620 5561 2052 110 30 13 chr5 116886723 116887022 -82743128 + AluSg SINE Alu 2 305 -5 241 248 50 79 chr5 116887641 116887742 -82742408 + MIR3 SINE MIR 7 104 -104 516 256 65 18 chr5 116888301 116888469 -82741681 + MER5B DNA MER1_type 1 176 -2 290 275 176 54 chr5 116888552 116888774 -82741376 + L2 LINE L2 2219 2467 -847 209 295 16 0 chr5 116888823 116888884 -82741266 + L2 LINE L2 2877 2938 -334 416 263 76 49 chr5 116888945 116889169 -82740981 + L2 LINE L2 3074 3303 -10 181 343 0 43 chr5 116890257 116890327 -82739823 + L2 LINE L2 2764 2830 -484 221 358 115 42 chr5 116890340 116890505 -82739645 + L2 LINE L2 3045 3221 -51 185 250 0 0 chr5 116890684 116890720 -82739430 - L2 LINE L2 -15 3298 3263 301 180 45 34 chr5 116892130 116892219 -82737931 - MIR SINE MIR 0 262 173 592 243 8 9 chr5 116892355 116892495 -82737655 - MIR SINE MIR -62 146 19 182 229 0 0 chr5 116892863 116892898 -82737252 - MIR SINE MIR -59 149 115 267 93 0 0 chr5 116893924 116893967 -82736183 + (TG)n Simple_repeat Simple_repeat 2 44 0 29 47 0 0 chr5 116894398 116894441 -82735709 + AT_rich Low_complexity Low_complexity 1 43 0 260 348 161 0 chr5 116894611 116894766 -82735384 - MIR SINE MIR -72 190 11 316 219 175 44 chr5 116895262 116895376 -82734774 - MIR SINE MIR -13 249 121 46 0 0 0 chr5 116895773 116895819 -82734331 + AT_rich Low_complexity Low_complexity 1 46 0 216 235 0 39 chr5 116895886 116895937 -82734213 - L2 LINE L2 -5 3267 3219 463 200 60 0 chr5 116896047 116896147 -82734003 + MER5A DNA MER1_type 4 109 -80 1071 138 50 22 chr5 116896194 116896375 -82733775 + AluJb SINE Alu 1 186 -126 204 67 0 0 chr5 116896389 116896419 -82733731 + (A)n Simple_repeat Simple_repeat 1 30 0 323 174 58 0 chr5 116896511 116896580 -82733570 + L1ME3 LINE L1 6089 6161 -1 368 282 92 90 chr5 116896580 116896690 -82733460 + L1M4 LINE L1 3082 3190 -2956 566 120 43 43 chr5 116896690 116896807 -82733343 + L1PA8 LINE L1 6050 6166 -6 368 282 92 90 chr5 116896807 116897153 -82732997 + L1M4 LINE L1 3190 3539 -2607 247 260 21 10 chr5 116897356 116897452 -82732698 + L1MEc LINE L1 109 205 -6191 3896 157 85 53 chr5 116898020 116898894 -82731256 + MER21A LTR ERV1 1 902 -29 2128 131 0 3 chr5 116899136 116899448 -82730702 - AluSx SINE Alu -1 311 1 350 368 27 8 chr5 116899545 116899806 -82730344 + MLT1K LTR MaLR 4 269 -319 2172 129 0 7 chr5 116900079 116900381 -82729769 + AluSx SINE Alu 1 300 -12 212 137 20 0 chr5 116900638 116900689 -82729461 + (TA)n Simple_repeat Simple_repeat 2 53 0 461 259 137 10 chr5 116900817 116900982 -82729168 - MIR SINE MIR -62 146 1 567 321 19 5 chr5 116901446 116901658 -82728492 + MER58A DNA MER1_type 10 224 0 236 274 94 19 chr5 116902143 116902249 -82727901 + MLT1J LTR MaLR 19 132 -379 250 254 45 9 chr5 116902475 116902585 -82727565 + LTR67 LTR ERVL 436 549 -8 1768 159 30 70 chr5 116903228 116903519 -82726631 - MLT1C LTR MaLR 0 467 166 198 0 0 0 chr5 116903519 116903541 -82726609 + (TG)n Simple_repeat Simple_repeat 1 22 0 1983 116 4 0 chr5 116903541 116903808 -82726342 - AluSc SINE Alu -33 276 9 1768 159 30 70 chr5 116903808 116903917 -82726233 - MLT1C LTR MaLR -299 168 82 354 213 0 0 chr5 116903918 116903993 -82726157 + AluJ/FLAM SINE Alu 2 76 -226 583 227 11 51 chr5 116904150 116904326 -82725824 + MLT1J LTR MaLR 1 169 -342 246 325 0 0 chr5 116904572 116904652 -82725498 + LTR67 LTR ERVL 432 511 -46 266 228 148 0 chr5 116904742 116904843 -82725307 + MER63 DNA MER1_type 3 744 -92 226 204 0 0 chr5 116904934 116904978 -82725172 - MIR SINE MIR -148 114 71 932 197 54 118 chr5 116905360 116905750 -82724400 + MLT1A1 LTR MaLR 1 365 0 8968 105 24 0 chr5 116906575 116907832 -82722318 - HSMAR1 DNA Mariner 0 1287 1 388 281 62 39 chr5 116908403 116908581 -82721569 + L1ME4a LINE L1 5727 5908 -213 842 184 75 13 chr5 116908774 116909079 -82721071 + L1M4 LINE L1 2761 3084 -3062 4021 239 57 18 chr5 116909083 116910512 -82719638 + L1M4 LINE L1 3400 4884 -1262 2209 112 21 6 chr5 116911585 116911923 -82718227 + L1PA14 LINE L1 5812 6154 -7 2445 45 41 0 chr5 116911943 116912234 -82717916 - AluY SINE Alu -8 303 1 539 318 52 5 chr5 116912244 116912436 -82717714 + MIR SINE MIR 58 258 -4 588 29 0 0 chr5 116912740 116912810 -82717340 + (TC)n Simple_repeat Simple_repeat 2 71 0 243 0 0 0 chr5 116912809 116912836 -82717314 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 2338 107 13 0 chr5 116912837 116913145 -82717005 - AluSx SINE Alu 0 312 1 981 137 33 28 chr5 116914057 116914239 -82715911 - L1MB4 LINE L1 -8 6172 5990 335 313 40 0 chr5 116914570 116914669 -82715481 - MIR SINE MIR -79 183 81 658 191 0 0 chr5 116914743 116914853 -82715297 + FRAM SINE Alu 46 155 -21 182 400 30 0 chr5 116914871 116914971 -82715179 + MIR3 SINE MIR 55 157 -51 1524 164 82 134 chr5 116915726 116916264 -82713886 - MER67D LTR ERV1 0 514 5 542 268 83 57 chr5 116918536 116918764 -82711386 + MIR SINE MIR 29 262 0 297 353 69 18 chr5 116919145 116919420 -82710730 - L2 LINE L2 -372 2942 2654 195 258 62 55 chr5 116919538 116919666 -82710484 - L2 LINE L2 -1218 2096 1968 471 314 116 6 chr5 116920369 116920541 -82709609 + MIR SINE MIR 20 210 -52 24 32 0 0 chr5 116920848 116920879 -82709271 + AT_rich Low_complexity Low_complexity 1 31 0 224 167 0 21 chr5 116920920 116920968 -82709182 + (TA)n Simple_repeat Simple_repeat 2 48 0 4646 135 1 15 chr5 116921104 116921899 -82708251 + L1PA13 LINE L1 5380 6163 0 223 267 17 0 chr5 116922121 116922181 -82707969 - L3 LINE CR1 -162 1415 1355 197 356 0 33 chr5 116923382 116923472 -82706678 - L2 LINE L2 0 3272 3186 213 178 0 0 chr5 116924611 116924656 -82705494 + CT-rich Low_complexity Low_complexity 4 48 0 2541 65 0 0 chr5 116924977 116925287 -82704863 + AluY SINE Alu 1 310 -1 2836 235 47 21 chr5 116926188 116927249 -82702901 - L1ME1 LINE L1 -24 6142 5054 2258 93 0 13 chr5 116927696 116927996 -82702154 + AluY SINE Alu 1 296 -15 2284 112 0 0 chr5 116928610 116928906 -82701244 - AluSx SINE Alu -16 296 1 191 353 30 75 chr5 116930298 116930431 -82699719 - L2 LINE L2 -2 3270 3144 2292 97 3 10 chr5 116930459 116930770 -82699380 + AluSq SINE Alu 1 309 -4 1401 199 27 12 chr5 116930880 116931136 -82699014 + AluJo SINE Alu 1 260 -52 292 151 78 69 chr5 116932284 116932407 -82697743 + MER69 DNA AcHobo 47 2513 -13 22 0 0 0 chr5 116934552 116934574 -82695576 + AT_rich Low_complexity Low_complexity 1 22 0 2469 201 29 35 chr5 116934908 116935044 -82695106 - L1MB3 LINE L1 -60 6359 6224 1989 146 143 11 chr5 116935044 116935422 -82694728 + MSTA LTR MaLR 1 428 0 2469 201 29 35 chr5 116935422 116935782 -82694368 - L1MB3 LINE L1 -195 6224 5863 2756 69 11 0 chr5 116935782 116936145 -82694005 - L1PA8 LINE L1 -1 6171 5805 2469 201 29 35 chr5 116936145 116936700 -82693450 - L1MB3 LINE L1 -556 5863 5335 646 38 0 0 chr5 116936700 116936780 -82693370 + MADE1 DNA Mariner 1 80 0 2469 201 29 35 chr5 116936780 116936891 -82693259 - L1MB3 LINE L1 -1084 5335 5225 1367 163 55 40 chr5 116936920 116937245 -82692905 - L1MA7 LINE L1 -1 6290 5961 * 8926 208 51 12 chr5 116937237 116942196 -82687954 - L1MB3 LINE L1 -1147 5235 19 24 0 0 0 chr5 116942225 116942249 -82687901 + AT_rich Low_complexity Low_complexity 1 24 0 295 309 0 0 chr5 116945849 116945946 -82684204 - MER58A DNA MER1_type -15 209 113 685 227 154 50 chr5 116945948 116946305 -82683845 + MSTD LTR MaLR 1 394 -2 30114 34 2 1 chr5 116946392 116951011 -82679139 - L1PA4 LINE L1 -1 6154 1531 555 211 18 0 chr5 116951011 116951125 -82679025 - MER58A DNA MER1_type 0 116 1 180 375 125 18 chr5 116951172 116951396 -82678754 + L2 LINE L2 2812 3059 -213 223 228 174 11 chr5 116955325 116955417 -82674733 - L2 LINE L2 -10 3303 3197 210 323 32 0 chr5 116955568 116955630 -82674520 - L2 LINE L2 -220 3052 2989 1604 249 33 29 chr5 116955784 116956299 -82673851 - LTR40a LTR ERVL 0 519 3 34811 37 1 0 chr5 116956315 116961565 -82668585 - L1PA3 LINE L1 -4 6151 900 390 103 0 0 chr5 116961569 116961637 -82668513 - L1PA3 LINE L1 -5379 767 700 725 234 51 0 chr5 116961678 116961836 -82668314 + MER58A DNA MER1_type 1 166 0 578 246 89 57 chr5 116961882 116962045 -82668105 - MLT1J LTR MaLR -196 315 138 2662 202 31 2 chr5 116962045 116962589 -82667561 - MER68 LTR ERV1 -2 560 1 578 246 89 57 chr5 116962589 116962705 -82667445 - MLT1J LTR MaLR -373 138 27 404 200 31 3 chr5 116962739 116962902 -82667248 - MER20 DNA MER1_type -1 218 8 282 374 89 41 chr5 116962906 116963345 -82666805 - L2 LINE L2 -366 2948 2489 655 287 84 44 chr5 116965463 116965846 -82664304 - LTR33 LTR ERVL -4 517 120 459 301 69 17 chr5 116966003 116966176 -82663974 - MER5A DNA MER1_type -7 182 1 2436 205 2 39 chr5 117021475 117022035 -82608115 - L1 LINE L1 -1620 4526 3988 2031 119 44 107 chr5 117022036 117022466 -82607684 + Tigger1 DNA MER2_type 961 1363 -1055 1241 127 5 36 chr5 117022468 117022688 -82607462 + Tigger1 DNA MER2_type 1649 1861 -557 2129 164 30 30 chr5 117022930 117023357 -82606793 + Tigger1 DNA MER2_type 1992 2418 0 231 244 73 12 chr5 117023783 117023865 -82606285 - MIR SINE MIR -1 261 175 22537 38 0 8 chr5 117026161 117028970 -82601180 - L1P LINE L1 -2145 4001 1216 7578 100 5 8 chr5 117029322 117031160 -82598990 - L1PA15 LINE L1 0 6165 4312 1558 203 59 69 chr5 117031732 117032273 -82597877 - MER67C LTR ERV1 0 514 9 2328 95 0 16 chr5 117032937 117033253 -82596897 - AluY SINE Alu 0 311 1 4381 164 48 19 chr5 117033253 117034838 -82595312 + L1PA16 LINE L1 4318 5926 -240 2320 99 0 10 chr5 117034839 117035151 -82594999 - AluSx SINE Alu -3 309 1 872 48 8 32 chr5 117035157 117035283 -82594867 - AluSq/x SINE Alu -179 133 11 27 29 0 0 chr5 117035420 117035454 -82594696 + AT_rich Low_complexity Low_complexity 1 34 0 5577 208 135 81 chr5 117036274 117038757 -82591393 + Charlie2a DNA MER1_type 7 2625 -237 15586 26 2 0 chr5 117038787 117040823 -82589327 + L1P1 LINE L1 3575 5613 -542 989 205 30 10 chr5 117040929 117041160 -82588990 - L1M3 LINE L1 -419 5761 5524 3254 245 51 38 chr5 117041165 117042402 -82587748 - L1M3 LINE L1 -856 5290 4038 10881 77 4 1 chr5 117042404 117044575 -82585575 - L1PA7 LINE L1 -1 6153 3989 1284 117 0 0 chr5 117044576 117044764 -82585386 - L1PA7 LINE L1 -3940 2206 2019 4020 61 15 2 chr5 117044767 117045309 -82584841 + L1P LINE L1 3 551 -5595 2720 37 15 0 chr5 117045412 117045739 -82584411 - L1PA7 LINE L1 -4284 1862 1531 596 211 18 0 chr5 117045739 117045853 -82584297 - MER58A DNA MER1_type 0 116 1 216 228 174 11 chr5 117050064 117050156 -82579994 - L2 LINE L2 -10 3303 3197 225 306 32 0 chr5 117050307 117050369 -82579781 - L2 LINE L2 -220 3052 2989 1753 245 37 33 chr5 117050523 117051038 -82579112 - LTR40a LTR ERVL 0 519 3 13155 30 3 2 chr5 117051054 117053317 -82576833 - L1PA3 LINE L1 -4 6151 3888 26915 48 3 2 chr5 117053466 117056892 -82573258 - L1P LINE L1 -1888 4258 700 681 254 77 68 chr5 117056892 117056933 -82573217 - MLT1J LTR MaLR -143 368 329 826 219 198 0 chr5 117056933 117057120 -82573030 + MER58A DNA MER1_type 1 224 0 681 254 77 68 chr5 117057120 117057300 -82572850 - MLT1J LTR MaLR -182 329 140 2762 206 29 7 chr5 117057300 117057848 -82572302 - MER68 LTR ERV1 -2 560 1 681 254 77 68 chr5 117057848 117057964 -82572186 - MLT1J LTR MaLR -371 140 27 433 209 31 3 chr5 117057998 117058161 -82571989 - MER20 DNA MER1_type -1 218 8 218 369 91 43 chr5 117058165 117058604 -82571546 - L2 LINE L2 -366 2948 2489 770 288 83 44 chr5 117060719 117061104 -82569046 - LTR33 LTR ERVL -2 519 120 452 298 70 18 chr5 117061263 117061434 -82568716 - MER5A DNA MER1_type -9 180 1 2269 188 37 69 chr5 117061874 117062341 -82567809 + MLT2B1 LTR ERVL 1 450 -70 1901 138 75 106 chr5 117062341 117062658 -82567492 - MSTA LTR MaLR 0 428 127 2415 66 7 3 chr5 117062658 117062963 -82567187 + AluY SINE Alu 1 306 -5 1901 138 75 106 chr5 117062963 117063087 -82567063 - MSTA LTR MaLR -301 127 1 2269 188 37 69 chr5 117063087 117063156 -82566994 + MLT2B1 LTR ERVL 450 520 0 200 343 114 43 chr5 117064362 117064828 -82565322 + L2 LINE L2 2258 2756 -558 379 296 19 19 chr5 117065171 117065279 -82564871 + MIR3 SINE MIR 10 117 -91 596 264 78 18 chr5 117065499 117065666 -82564484 - MER5B DNA MER1_type -1 177 1 679 165 9 0 chr5 117065674 117065783 -82564367 + MER5A DNA MER1_type 1 110 -79 283 287 148 0 chr5 117066722 117066837 -82563313 + L2 LINE L2 3181 3312 -1 712 189 132 57 chr5 117066926 117067011 -82563139 + MER67C LTR ERV1 1 78 -632 754 98 24 41 chr5 117067011 117067134 -82563016 + L1PA10 LINE L1 6048 6168 0 712 189 132 57 chr5 117067134 117067276 -82562874 + MER67C LTR ERV1 78 245 -465 461 202 37 0 chr5 117067291 117067400 -82562750 - L1PA16 LINE L1 -834 5312 5200 4138 157 42 21 chr5 117067404 117068209 -82561941 + L1PA16 LINE L1 5343 6164 -2 371 219 0 14 chr5 117068217 117068290 -82561860 + MER67C LTR ERV1 233 304 -406 1487 89 37 20 chr5 117068292 117068538 -82561612 + L1PA7 LINE L1 4136 4385 -1761 2805 75 44 7 chr5 117068831 117069243 -82560907 + L1PA7 LINE L1 5726 6152 -2 1896 167 72 53 chr5 117069253 117069667 -82560483 + MER67C LTR ERV1 289 710 0 203 200 0 0 chr5 117070007 117070042 -82560108 + (TAA)n Simple_repeat Simple_repeat 3 37 0 601 259 166 5 chr5 117070051 117070256 -82559894 - MIR SINE MIR -6 256 19 1048 202 29 5 chr5 117070491 117070699 -82559451 - MER52A LTR ERV1 0 1755 1543 6656 177 12 81 chr5 117070705 117072146 -82558004 + MER52A LTR ERV1 413 1755 0 314 318 96 46 chr5 117072286 117072547 -82557603 - L2 LINE L2 -1079 2235 1962 954 283 114 33 chr5 117074304 117074760 -82555390 + MLT1K LTR MaLR 88 580 -8 1749 200 65 77 chr5 117074924 117074977 -82555173 - MLT1D LTR MaLR -1 504 452 2146 131 12 12 chr5 117074977 117075313 -82554837 - L1PA15 LINE L1 0 6165 5830 1749 200 65 77 chr5 117075313 117075769 -82554381 - MLT1D LTR MaLR -53 452 1 2302 244 41 67 chr5 117076332 117077412 -82552738 + L2 LINE L2 2170 3218 -95 2359 86 0 19 chr5 117077412 117077727 -82552423 - AluY SINE Alu -2 309 1 2302 244 41 67 chr5 117077727 117077820 -82552330 + L2 LINE L2 3218 3312 -1 662 323 158 6 chr5 117080137 117080545 -82549605 - L2 LINE L2 -268 3045 2584 243 191 0 0 chr5 117080772 117080819 -82549331 - LTR30 LTR ERV1 -132 590 544 5253 119 77 32 chr5 117080822 117081937 -82548213 - pTR5 LTR ERV1 -417 2021 743 2113 256 12 11 chr5 117081937 117082511 -82547639 - L1 LINE L1 -3372 2774 2200 13055 150 28 12 chr5 117083079 117085825 -82544325 - L1PA15-16 LINE L1 -3935 2914 1 474 191 67 29 chr5 117086367 117086472 -82543678 - L2 LINE L2 0 3313 3205 204 315 134 16 chr5 117086566 117086693 -82543457 - MIR SINE MIR -107 155 14 189 0 0 0 chr5 117087326 117087347 -82542803 + (T)n Simple_repeat Simple_repeat 1 21 0 339 25 0 0 chr5 117087799 117087839 -82542311 + (CA)n Simple_repeat Simple_repeat 2 41 0 600 286 29 23 chr5 117088728 117088899 -82541251 + MIR SINE MIR 29 200 -62 1096 214 124 21 chr5 117088906 117089196 -82540954 - MER2 DNA MER2_type -25 320 1 212 306 35 12 chr5 117089355 117089440 -82540710 - L2 LINE L2 -209 3063 2977 432 297 26 13 chr5 117089734 117089889 -82540261 - LTR67 LTR ERVL 0 557 401 985 237 14 14 chr5 117089998 117090205 -82539945 + MER58A DNA MER1_type 18 224 0 307 331 154 46 chr5 117090487 117090877 -82539273 + HAL1 LINE L1 943 1374 -1133 2458 88 0 0 chr5 117090890 117091198 -82538952 - AluY SINE Alu -3 308 1 201 74 0 0 chr5 117091497 117091524 -82538626 + (A)n Simple_repeat Simple_repeat 1 27 0 23 92 0 0 chr5 117092225 117092290 -82537860 + AT_rich Low_complexity Low_complexity 1 65 0 311 283 22 72 chr5 117093095 117093233 -82536917 + MIR SINE MIR 20 150 -112 249 108 0 0 chr5 117093440 117093477 -82536673 + (T)n Simple_repeat Simple_repeat 1 37 0 4705 270 55 20 chr5 117094903 117095210 -82534940 + L1MEc LINE L1 45 340 -6056 2923 99 0 0 chr5 117095210 117095574 -82534576 + THE1B LTR MaLR 1 364 0 11364 101 44 9 chr5 117095574 117097101 -82533049 + THE1B-int LTR MaLR 1 1580 0 2572 144 0 8 chr5 117097105 117097472 -82532678 + THE1B LTR MaLR 1 364 0 4705 270 55 20 chr5 117097472 117098849 -82531301 + L1MEc LINE L1 342 1794 -4602 2079 251 54 37 chr5 117098965 117099693 -82530457 + L1ME2 LINE L1 5423 6162 -2 309 247 108 57 chr5 117099788 117100084 -82530066 + L1MC5 LINE L1 7582 7892 -69 210 37 0 0 chr5 117100094 117100121 -82530029 + (TG)n Simple_repeat Simple_repeat 2 28 0 27 0 0 0 chr5 117100260 117100287 -82529863 + AT_rich Low_complexity Low_complexity 1 27 0 937 236 6 0 chr5 117100582 117100756 -82529394 - FAM SINE Alu 0 175 1 508 175 60 44 chr5 117100835 117101018 -82529132 - Charlie7 DNA MER1_type -6 2606 2421 268 193 18 0 chr5 117101015 117101072 -82529078 - Charlie7 DNA MER1_type -1902 710 653 * 225 335 68 62 chr5 117101397 117101705 -82528445 + L2 LINE L2 2737 3083 -189 303 85 0 0 chr5 117103222 117103269 -82526881 + (GA)n Simple_repeat Simple_repeat 2 48 0 31 0 0 0 chr5 117103379 117103410 -82526740 + AT_rich Low_complexity Low_complexity 1 31 0 246 336 60 0 chr5 117103520 117103669 -82526481 - L1ME3A LINE L1 -25 6145 5988 2519 123 0 9 chr5 117103689 117104029 -82526121 + MER1B DNA MER1_type 1 337 0 483 230 152 30 chr5 117104375 117104596 -82525554 - MIR SINE MIR -14 248 8 2785 107 8 3 chr5 117108064 117108437 -82521713 + THE1C LTR MaLR 1 375 0 10639 108 34 10 chr5 117108437 117109976 -82520174 + THE1C-int LTR MaLR 1 1575 -5 2598 120 25 3 chr5 117109981 117110348 -82519802 + THE1C LTR MaLR 1 375 0 341 308 51 16 chr5 117110401 117110524 -82519626 + MIR3 SINE MIR 44 169 -48 2363 85 0 10 chr5 117110531 117110826 -82519324 + AluSc SINE Alu 1 292 -17 527 286 76 2 chr5 117111574 117111769 -82518381 + MIR SINE MIR 16 224 -38 1259 292 84 21 chr5 117113261 117113737 -82516413 - MLT1J LTR MaLR 0 511 6 304 315 22 0 chr5 117115508 117115597 -82514553 - L2 LINE L2 0 3272 3182 279 274 137 88 chr5 117115597 117115948 -82514202 - L2 LINE L2 -65 3248 2881 1383 107 88 0 chr5 117116223 117116428 -82513722 - L1PA15 LINE L1 -3 6162 5940 703 227 141 50 chr5 117116973 117117250 -82512900 + MLT1J1 LTR MaLR 1 302 -144 452 202 145 141 chr5 117117872 117117967 -82512183 + MIR SINE MIR 4 97 -165 2254 107 13 0 chr5 117117967 117118265 -82511885 - AluSc SINE Alu -7 302 1 452 202 145 141 chr5 117118265 117118289 -82511861 + MIR SINE MIR 97 119 -143 1921 141 0 0 chr5 117118289 117118552 -82511598 - AluSq SINE Alu -50 263 1 452 202 145 141 chr5 117118552 117118679 -82511471 + MIR SINE MIR 119 252 -10 4239 186 36 19 chr5 117120048 117120821 -82509329 - MER21B LTR ERV1 -2 861 76 418 145 0 0 chr5 117120821 117120890 -82509260 + AluJ/FLAM SINE Alu 1 69 -233 805 148 0 37 chr5 117120892 117121027 -82509123 + AluSg/x SINE Alu 175 304 -8 466 205 12 0 chr5 117121032 117121115 -82509035 - MER21B LTR ERV1 -779 84 1 181 262 164 0 chr5 117121180 117121241 -82508909 - MIR SINE MIR -55 153 83 1946 168 3 72 chr5 117121377 117121596 -82508554 - MER7A DNA MER2_type -2692 346 113 2546 118 3 25 chr5 117121596 117121959 -82508191 - THE1A LTR MaLR 0 355 1 11792 95 31 1 chr5 117121959 117123493 -82506657 - THE1A-int LTR MaLR 0 1580 1 2577 116 3 25 chr5 117123493 117123856 -82506294 - THE1A LTR MaLR 0 355 1 1946 168 3 72 chr5 117123856 117124008 -82506142 - MER7A DNA MER2_type -2922 116 1 192 328 33 0 chr5 117124986 117125047 -82505103 + MIR SINE MIR 20 82 -180 31 68 0 0 chr5 117125166 117125225 -82504925 + AT_rich Low_complexity Low_complexity 1 59 0 187 333 0 15 chr5 117125922 117125988 -82504162 + MIR SINE MIR 79 143 -119 2146 125 3 7 chr5 117126383 117126687 -82503463 - AluSx SINE Alu -9 303 1 220 178 55 27 chr5 117127007 117127080 -82503070 + (TATG)n Simple_repeat Simple_repeat 3 77 0 302 232 82 41 chr5 117127090 117127284 -82502866 - L1ME4a LINE L1 -11 6110 5909 289 56 0 56 chr5 117127769 117127823 -82502327 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 351 260 79 0 chr5 117127839 117127966 -82502184 - L1ME4a LINE L1 -286 5835 5699 240 86 0 0 chr5 117127966 117128001 -82502149 + (TG)n Simple_repeat Simple_repeat 1 35 0 309 314 128 29 chr5 117128026 117128300 -82501850 - L1ME4a LINE L1 -2181 5627 5327 1995 248 95 18 chr5 117128375 117128924 -82501226 + MLT1E LTR MaLR 1 591 -2 2643 107 8 35 chr5 117129011 117129347 -82500803 - THE1B LTR MaLR 0 364 37 1994 157 0 7 chr5 117129347 117129646 -82500504 + AluSx SINE Alu 1 297 -15 2643 107 8 35 chr5 117129646 117129683 -82500467 - THE1B LTR MaLR -327 37 1 11268 112 32 6 chr5 117129683 117131222 -82498928 - THE1B-int LTR MaLR 0 1580 1 2780 110 3 6 chr5 117131222 117131585 -82498565 - THE1B LTR MaLR 0 364 3 22 35 0 0 chr5 117131740 117131769 -82498381 + AT_rich Low_complexity Low_complexity 1 29 0 311 319 0 11 chr5 117132088 117132179 -82497971 - L2 LINE L2 -2 3270 3181 1957 151 57 24 chr5 117132252 117132584 -82497566 - MER61A LTR ERV1 0 343 1 21326 82 63 36 chr5 117132584 117135703 -82494447 - MER61A-int LTR ERV1 0 5217 2014 1020 206 27 31 chr5 117135745 117136002 -82494148 - MER61A-int LTR ERV1 -4961 256 1 1666 146 120 35 chr5 117136002 117136318 -82493832 - MER61A LTR ERV1 0 343 1 329 359 89 31 chr5 117136359 117136754 -82493396 - L2 LINE L2 -234 3038 2622 1878 132 7 7 chr5 117136812 117137101 -82493049 + AluJb SINE Alu 1 289 -23 1543 200 50 36 chr5 117139170 117139374 -82490776 - MLT1A1 LTR MaLR 0 365 152 2272 92 0 3 chr5 117139374 117139666 -82490484 - AluSg SINE Alu -19 291 1 1543 200 50 36 chr5 117139666 117139821 -82490329 - MLT1A1 LTR MaLR -213 152 1 404 263 157 40 chr5 117140528 117140726 -82489424 + MIR SINE MIR 28 248 -14 201 290 160 0 chr5 117140717 117140817 -82489333 + MIR3 SINE MIR 91 206 -2 * 735 241 168 0 chr5 117140847 117141038 -82489112 - MER58A DNA MER1_type -1 223 1 198 0 0 0 chr5 117142958 117142980 -82487170 + (CA)n Simple_repeat Simple_repeat 1 22 0 326 248 142 18 chr5 117144333 117144446 -82485704 - L2 LINE L2 -2 3311 3185 239 73 73 0 chr5 117144708 117144763 -82485387 + T-rich Low_complexity Low_complexity 2 60 0 190 302 240 12 chr5 117145149 117145470 -82484680 - L2 LINE L2 -572 2742 2349 * 1406 284 89 21 chr5 117145450 117145965 -82484185 + L3 LINE CR1 420 969 -608 335 227 144 53 chr5 117146221 117146550 -82483600 + MLT1J2 LTR MaLR 66 434 -12 269 304 17 52 chr5 117146922 117147037 -82483113 - MIR3 SINE MIR -9 199 89 362 194 92 20 chr5 117148177 117148275 -82481875 - MIR SINE MIR 0 262 158 453 244 111 0 chr5 117148855 117148990 -82481160 - MER52A LTR ERV1 -10 1745 1596 335 231 14 105 chr5 117148991 117149134 -82481016 - MER52A LTR ERV1 -286 1469 1340 362 327 85 34 chr5 117149156 117149306 -82480844 - L1MC4a LINE L1 -1960 5848 5707 264 77 0 0 chr5 117149306 117149345 -82480805 + (CA)n Simple_repeat Simple_repeat 2 40 0 362 327 85 34 chr5 117149345 117149699 -82480451 - L1MC4a LINE L1 -2101 5707 5318 376 296 16 27 chr5 117149718 117149904 -82480246 - L1MC4a LINE L1 -840 5306 5123 180 0 0 0 chr5 117152494 117152514 -82477636 + (A)n Simple_repeat Simple_repeat 1 20 0 998 196 22 13 chr5 117152800 117153024 -82477126 - AluJo SINE Alu -1 311 86 474 350 30 15 chr5 117153790 117153990 -82476160 - MIR SINE MIR -38 224 22 906 110 159 6 chr5 117154294 117154457 -82475693 + MER53 DNA DNA 2 189 0 2051 157 0 3 chr5 117154508 117154821 -82475329 - AluJo SINE Alu 0 312 1 307 267 107 16 chr5 117155071 117155242 -82474908 - MIR SINE MIR -65 143 11 1486 198 61 98 chr5 117155569 117156109 -82474041 + MLT2B1 LTR ERVL 1 520 0 313 286 0 0 chr5 117156886 117156956 -82473194 - MER2 DNA MER2_type -7 338 269 1073 162 10 0 chr5 117156986 117157183 -82472967 - MER2 DNA MER2_type -145 200 2 248 345 110 7 chr5 117157275 117157420 -82472730 - MARNA DNA Mariner -165 421 262 372 227 210 8 chr5 117157711 117157830 -82472320 - MER5A DNA MER1_type 0 189 47 406 273 224 7 chr5 117157921 117158064 -82472086 + MER5B DNA MER1_type 1 174 -4 22 0 0 0 chr5 117158228 117158250 -82471900 + AT_rich Low_complexity Low_complexity 1 22 0 279 295 123 29 chr5 117159107 117159351 -82470799 - MLT1J LTR MaLR -31 480 214 2387 97 0 0 chr5 117159426 117159724 -82470426 + AluSc SINE Alu 1 298 -11 932 196 60 30 chr5 117159741 117160006 -82470144 - ORSL DNA AcHobo 0 275 3 1432 238 40 32 chr5 117160077 117160548 -82469602 + L1ME1 LINE L1 5688 6162 -4 2331 101 0 0 chr5 117161534 117161831 -82468319 - AluSp SINE Alu -16 297 1 453 224 10 0 chr5 117162942 117163040 -82467110 + MER63 DNA MER1_type 27 751 -85 1106 103 13 0 chr5 117163076 117163231 -82466919 + AluSg/x SINE Alu 156 312 0 302 258 0 0 chr5 117163233 117163299 -82466851 + MER63 DNA MER1_type 997 1062 0 216 232 159 0 chr5 117164011 117164080 -82466070 + L2 LINE L2 3156 3235 -37 420 287 37 15 chr5 117164389 117164525 -82465625 + MIR SINE MIR 93 231 -31 215 211 0 0 chr5 117164553 117164591 -82465559 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1821 153 57 49 chr5 117165795 117166182 -82463968 - MLT1B LTR MaLR 0 390 1 419 235 24 114 chr5 117168076 117168244 -82461906 - MIR3 SINE MIR -51 157 1 229 215 32 108 chr5 117168869 117168962 -82461188 + L2 LINE L2 3187 3272 0 264 257 0 0 chr5 117168989 117169102 -82461048 + (TG)n Simple_repeat Simple_repeat 2 114 0 289 98 0 0 chr5 117169707 117169748 -82460402 - MLT1D LTR MaLR -145 360 320 343 290 31 40 chr5 117169774 117169998 -82460152 + L1MC4a LINE L1 5671 5892 -1916 23 0 0 0 chr5 117173707 117173730 -82456420 + AT_rich Low_complexity Low_complexity 1 23 0 334 340 107 57 chr5 117173746 117174184 -82455966 + L3 LINE CR1 42 501 -1076 183 324 131 28 chr5 117174224 117174369 -82455781 - MER5B DNA MER1_type -18 160 1 * 430 339 186 0 chr5 117174369 117174545 -82455605 + L3 LINE CR1 554 763 -814 265 313 98 23 chr5 117175656 117175870 -82454280 + L3 LINE CR1 860 1089 -488 363 23 0 0 chr5 117175872 117175916 -82454234 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 294 300 171 24 chr5 117176393 117176603 -82453547 + MIR SINE MIR 22 262 0 * 379 348 52 35 chr5 117176591 117176878 -82453272 + L3 LINE CR1 1280 1571 -6 3124 205 57 43 chr5 117177935 117178542 -82451608 - L1MD1 LINE L1 -316 5926 5329 2621 207 35 6 chr5 117178542 117179166 -82450984 - L1MB7 LINE L1 -19 6165 5524 3124 205 57 43 chr5 117179166 117180406 -82449744 - L1MD1 LINE L1 -913 5329 4038 30089 101 12 22 chr5 117180408 117186454 -82443696 - L1PA7 LINE L1 -1 6468 407 252 0 0 0 chr5 117186454 117186482 -82443668 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 30089 101 12 22 chr5 117186482 117186881 -82443269 - L1PA7 LINE L1 -6062 407 5 504 220 62 23 chr5 117186881 117187058 -82443092 - L1MD1 LINE L1 -2085 4061 3878 366 302 0 16 chr5 117189144 117189273 -82440877 - 7SK RNA RNA -66 127 1 2068 160 151 11 chr5 117189609 117190052 -82440098 + MLT2B1 LTR ERVL 1 505 -15 1650 164 116 38 chr5 117190769 117191166 -82438984 + MSTA LTR MaLR 1 428 0 291 278 177 67 chr5 117191359 117191658 -82438492 + L3 LINE CR1 1072 1403 -174 299 27 0 0 chr5 117191696 117191733 -82438417 - U2 snRNA snRNA -151 37 1 642 211 41 20 chr5 117192541 117192787 -82437363 - Charlie2a DNA MER1_type 0 2862 2612 4402 33 0 0 chr5 117192789 117193339 -82436811 - L1P LINE L1 -2022 4124 3575 207 0 0 0 chr5 117193379 117193402 -82436748 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4810 212 131 78 chr5 117193404 117195864 -82434286 - Charlie2a DNA MER1_type -266 2596 7 238 226 0 19 chr5 117196670 117196723 -82433427 - MIR3 SINE MIR -23 185 134 1385 188 66 6 chr5 117196951 117197295 -82432855 + MLT1F1 LTR MaLR 1 366 -176 34 24 0 0 chr5 117197298 117197339 -82432811 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr5 117200634 117200657 -82429493 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 117201731 117201753 -82428397 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr5 117201865 117201891 -82428259 + AT_rich Low_complexity Low_complexity 1 26 0 259 287 87 72 chr5 117202356 117202551 -82427599 - L2 LINE L2 0 3272 3075 26 0 0 0 chr5 117202710 117202736 -82427414 + AT_rich Low_complexity Low_complexity 1 26 0 696 277 62 56 chr5 117205313 117205652 -82424498 + L3b LINE CR1 1229 1569 -14 402 349 90 5 chr5 117205939 117206128 -82424022 - MIR SINE MIR -50 212 8 231 61 0 0 chr5 117206924 117206957 -82423193 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 261 299 128 0 chr5 117207757 117207874 -82422276 - L2 LINE L2 -3 3269 3138 2570 110 16 8 chr5 117207919 117208302 -82421848 + MLT1B LTR MaLR 1 386 -4 432 37 0 0 chr5 117211018 117211072 -82419078 + (CA)n Simple_repeat Simple_repeat 2 55 0 237 327 30 30 chr5 117214330 117214431 -82415719 + MIR SINE MIR 162 262 0 * 329 167 24 71 chr5 117214415 117214499 -82415651 - MIR SINE MIR -96 166 87 182 349 0 0 chr5 117216107 117216170 -82413980 - L2 LINE L2 0 3272 3210 211 338 28 0 chr5 117217683 117217754 -82412396 - L2 LINE L2 0 3272 3200 343 338 53 0 chr5 117219587 117219720 -82410430 + MER117 DNA MER1_type 17 156 -41 193 313 0 0 chr5 117220326 117220374 -82409776 - L2 LINE L2 -15 3298 3251 408 76 25 13 chr5 117222533 117222612 -82407538 + (TA)n Simple_repeat Simple_repeat 1 80 0 296 187 0 13 chr5 117226416 117226491 -82403659 + G-rich Low_complexity Low_complexity 4 77 0 194 104 0 83 chr5 117226594 117226642 -82403508 + (TC)n Simple_repeat Simple_repeat 1 44 0 301 252 91 95 chr5 117226680 117226922 -82403228 + L1M2 LINE L1 678 918 -5931 631 212 15 23 chr5 117228585 117228737 -82401413 - FLAM_C SINE Alu 0 151 1 830 196 26 83 chr5 117229262 117229492 -82400658 - MER20 DNA MER1_type -1 218 2 319 312 21 43 chr5 117229763 117229904 -82400246 - L2 LINE L2 -201 3071 2934 290 248 165 25 chr5 117230239 117230360 -82399790 + MIR SINE MIR 81 218 -44 392 311 29 111 chr5 117230529 117230809 -82399341 + L2 LINE L2 2925 3181 -91 258 378 35 58 chr5 117231057 117231520 -82398630 - L2 LINE L2 -527 2787 2336 1786 156 62 52 chr5 117231607 117231991 -82398159 + MLT1B LTR MaLR 1 388 -2 252 59 0 0 chr5 117232934 117232968 -82397182 + (TG)n Simple_repeat Simple_repeat 1 34 0 2339 99 51 25 chr5 117233489 117233844 -82396306 - THE1B LTR MaLR 0 364 1 246 325 53 1 chr5 117234111 117234230 -82395920 - MIR SINE MIR -63 145 58 2024 181 9 0 chr5 117234238 117234570 -82395580 - MER1B DNA MER1_type 0 337 3 733 234 101 31 chr5 117234620 117234847 -82395303 - MIR SINE MIR -12 250 8 1655 202 3 0 chr5 117236841 117237148 -82393002 - AluJo SINE Alu -4 308 1 4773 125 11 3 chr5 117237550 117238293 -82391857 - L1PA16 LINE L1 -9 6157 5409 594 247 78 71 chr5 117238391 117238699 -82391451 - L2 LINE L2 0 3313 3004 1919 168 128 8 chr5 117238732 117239108 -82391042 - MSTA LTR MaLR 0 428 8 308 261 46 98 chr5 117239124 117239277 -82390873 - L2 LINE L2 -344 2970 2826 1953 152 3 13 chr5 117239738 117240053 -82390097 - AluJb SINE Alu 0 312 1 353 301 87 33 chr5 117240425 117240608 -82389542 - MIR SINE MIR -50 212 20 333 68 0 0 chr5 117240610 117240654 -82389496 + (CA)n Simple_repeat Simple_repeat 2 45 0 2379 90 0 0 chr5 117240666 117240966 -82389184 + AluSp SINE Alu 7 306 -7 314 241 24 24 chr5 117241229 117241312 -82388838 + MIR3 SINE MIR 126 208 0 24 0 0 0 chr5 117242313 117242337 -82387813 + AT_rich Low_complexity Low_complexity 1 24 0 522 211 0 0 chr5 117243365 117243479 -82386671 + GA-rich Low_complexity Low_complexity 3 116 0 2439 248 14 14 chr5 117243494 117244120 -82386030 + MLT1E2 LTR MaLR 1 626 0 693 219 0 0 chr5 117244241 117244369 -82385781 - FLAM_A SINE Alu -5 128 1 813 310 56 23 chr5 117244926 117245554 -82384596 + L1MC/D LINE L1 5182 5823 -801 1866 201 97 55 chr5 117245557 117246143 -82384007 + L1ME3 LINE L1 5551 6161 -1 526 59 0 24 chr5 117246166 117246251 -82383899 + (GGA)n Simple_repeat Simple_repeat 3 85 0 945 207 21 5 chr5 117246305 117246498 -82383652 - MER105 DNA DNA -2 202 7 353 39 20 0 chr5 117246515 117246566 -82383584 + (TG)n Simple_repeat Simple_repeat 2 53 0 467 282 70 0 chr5 117247488 117247630 -82382520 - MIR SINE MIR -40 222 71 22 0 0 0 chr5 117249081 117249103 -82381047 + AT_rich Low_complexity Low_complexity 1 22 0 443 258 8 33 chr5 117249960 117250080 -82380070 + MLT1G LTR MaLR 1 117 -478 644 82 0 0 chr5 117250083 117250180 -82379970 - L1PA13 LINE L1 -3 6160 6064 966 127 82 0 chr5 117250211 117250369 -82379781 - L1PA13 LINE L1 -20 6143 5973 1085 279 128 28 chr5 117250369 117250828 -82379322 + MLT1G LTR MaLR 78 582 -8 471 295 104 6 chr5 117251092 117251275 -82378875 + MIR SINE MIR 51 251 -11 180 300 17 17 chr5 117251281 117251341 -82378809 + MIR SINE MIR 203 262 0 1882 162 20 0 chr5 117251921 117252223 -82377927 - AluSx SINE Alu -4 308 1 622 250 20 78 chr5 117252685 117252929 -82377221 - L1M4 LINE L1 -2054 4092 3863 216 122 49 0 chr5 117253029 117253070 -82377080 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 455 276 51 139 chr5 117253214 117253609 -82376541 - MLT1J1 LTR MaLR -86 360 1 419 289 13 13 chr5 117253775 117253927 -82376223 + MER103 DNA DNA 6 157 -9 2131 119 0 0 chr5 117254475 117254768 -82375382 - AluY SINE Alu -18 293 1 478 315 103 6 chr5 117255190 117255355 -82374795 - L3 LINE CR1 -20 1557 1377 1430 115 25 13 chr5 117255355 117255590 -82374560 + THE1C LTR MaLR 138 375 0 393 324 46 25 chr5 117255614 117255852 -82374298 - L3 LINE CR1 -243 1334 1092 245 255 0 38 chr5 117256841 117256947 -82373203 - Charlie7 DNA MER1_type -2 2610 2509 352 167 51 123 chr5 117256957 117257006 -82373144 - Charlie7 DNA MER1_type -2473 139 88 1391 201 33 7 chr5 117257006 117257310 -82372840 + AluJo SINE Alu 1 312 0 352 167 51 123 chr5 117257310 117257398 -82372752 - Charlie7 DNA MER1_type -2524 88 12 1181 195 69 47 chr5 117257885 117258301 -82371849 + MLT2D LTR ERVL 2 479 -41 287 263 12 25 chr5 117258303 117258383 -82371767 + (TATATG)n Simple_repeat Simple_repeat 2 80 0 292 311 88 72 chr5 117259219 117259650 -82370500 + L1ME LINE L1 5266 5703 -418 672 207 33 0 chr5 117259652 117259773 -82370377 + AluJb SINE Alu 3 127 -185 253 325 37 5 chr5 117259805 117259968 -82370182 + L1ME LINE L1 5713 5884 -237 1166 175 8 75 chr5 117259968 117260220 -82369930 - MER8 DNA MER2_type -4 235 1 253 325 37 5 chr5 117260220 117260244 -82369906 + L1ME LINE L1 5884 5906 -215 1783 158 32 9 chr5 117260260 117260608 -82369542 - L1MA8 LINE L1 -5 6286 5931 1804 138 35 14 chr5 117260651 117260941 -82369209 - AluJo SINE Alu -12 300 5 387 248 111 0 chr5 117261070 117261187 -82368963 + MIR SINE MIR 112 241 -21 203 263 18 0 chr5 117261874 117261931 -82368219 + GA-rich Low_complexity Low_complexity 3 60 0 3190 145 16 4 chr5 117262348 117262857 -82367293 - MLT2B2 LTR ERVL 0 515 1 1270 190 63 22 chr5 117262945 117263213 -82366937 + AluJo SINE Alu 1 279 -33 4953 156 10 18 chr5 117263279 117264174 -82365976 + L1MC1 LINE L1 5433 6320 -13 297 282 0 0 chr5 117265026 117265097 -82365053 - MIR SINE MIR -85 177 107 2050 164 76 66 chr5 117265129 117265629 -82364521 - MLT1D LTR MaLR 0 505 1 441 0 0 0 chr5 117266231 117266280 -82363870 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 269 254 14 56 chr5 117266354 117266425 -82363725 - L2 LINE L2 0 3313 3246 4481 93 9 12 chr5 117267542 117267903 -82362247 - L1PB1 LINE L1 0 6151 5791 306 0 0 0 chr5 117267903 117267937 -82362213 + (TG)n Simple_repeat Simple_repeat 2 35 0 4481 93 9 12 chr5 117267937 117268218 -82361932 - L1PB1 LINE L1 -360 5791 5511 1714 178 15 0 chr5 117268219 117268562 -82361588 - L1 LINE L1 -1292 4854 4507 1990 112 3 43 chr5 117269073 117269376 -82360774 - AluSg SINE Alu -17 293 3 3759 205 111 23 chr5 117269529 117269799 -82360351 + MER45B DNA AcHobo 1 246 -1335 3244 137 115 9 chr5 117269799 117270441 -82359709 - MER67C LTR ERV1 0 710 1 3759 205 111 23 chr5 117270441 117271126 -82359024 + MER45B DNA AcHobo 246 1040 0 198 300 30 50 chr5 117271129 117271229 -82358921 + MER5B DNA MER1_type 36 133 -45 21 36 0 0 chr5 117272364 117272392 -82357758 + AT_rich Low_complexity Low_complexity 1 28 0 282 283 115 18 chr5 117322730 117322843 -82307307 - L2 LINE L2 -578 2736 2613 393 257 62 14 chr5 117322896 117323040 -82307110 + MLT1J LTR MaLR 1 151 -360 534 292 27 16 chr5 117323066 117323251 -82306899 + MLT1J LTR MaLR 220 406 -105 199 326 115 43 chr5 117323533 117323837 -82306313 + L2 LINE L2 2159 2484 -830 251 385 21 0 chr5 117324124 117324267 -82305883 + MIR SINE MIR 50 195 -67 358 155 0 0 chr5 117324466 117324524 -82305626 - L2 LINE L2 -5 3308 3251 636 111 0 0 chr5 117324749 117324848 -82305302 - L1M2 LINE L1 -518 5782 5684 1396 146 94 10 chr5 117324848 117325152 -82304998 + L1MA8 LINE L1 5957 6291 0 676 172 18 12 chr5 117325194 117325367 -82304783 + MSTC LTR MaLR 4 180 -185 212 311 68 0 chr5 117325828 117325902 -82304248 + MIR SINE MIR 38 116 -92 740 213 53 12 chr5 117326042 117326211 -82303939 + MIR SINE MIR 22 197 -65 479 164 14 107 chr5 117326223 117326363 -82303787 + L1ME1 LINE L1 6007 6133 -33 2303 158 24 7 chr5 117326392 117326810 -82303340 + L1MC2 LINE L1 5908 6332 -12 405 322 38 27 chr5 117327657 117327840 -82302310 + MIR3 SINE MIR 24 208 0 428 311 150 11 chr5 117328163 117328423 -82301727 - L1ME LINE L1 -299 5822 5527 399 282 154 0 chr5 117328438 117328594 -82301556 + MIR SINE MIR 7 186 -76 298 242 95 47 chr5 117329453 117329614 -82300536 - MIR3 SINE MIR -66 142 7 511 269 0 35 chr5 117330895 117331036 -82299114 + L2 LINE L2 3178 3313 0 794 221 44 6 chr5 117331311 117331492 -82298658 + MER5A DNA MER1_type 1 188 -1 677 181 15 8 chr5 117331765 117331898 -82298252 + FRAM SINE Alu 20 153 -23 215 368 42 11 chr5 117331903 117331998 -82298152 - MIR3 SINE MIR -24 184 87 203 319 0 66 chr5 117333754 117333845 -82296305 + L2 LINE L2 2605 2689 -625 316 316 68 0 chr5 117335875 117336008 -82294142 - L2 LINE L2 -1 3312 3171 1726 335 97 11 chr5 117336049 117336982 -82293168 - L2 LINE L2 -364 2950 1938 896 272 103 13 chr5 117337006 117337307 -82292843 - MLT1G1 LTR MaLR -194 401 74 316 326 25 5 chr5 117337393 117337589 -82292561 + L1MC4a LINE L1 5694 5893 -1915 424 213 98 94 chr5 117337653 117337888 -82292262 + MER106A DNA MER1_type 1 236 0 7343 30 12 0 chr5 117339316 117340395 -82289755 + L1PA4 LINE L1 5066 6155 0 1043 227 27 102 chr5 117340433 117340843 -82289307 - MLT1B LTR MaLR -11 379 1 742 209 37 0 chr5 117341062 117341253 -82288897 - L1MB4 LINE L1 -6 6174 5977 405 319 72 19 chr5 117341750 117341957 -82288193 + MER102a DNA MER1_type 105 322 -8 180 286 54 18 chr5 117342813 117342869 -82287281 + MIR SINE MIR 2 59 -203 2041 143 3 3 chr5 117343388 117343688 -82286462 + AluSx SINE Alu 1 300 -12 617 238 176 24 chr5 117343855 117344150 -82286000 + MLT1C LTR MaLR 35 390 -77 268 103 0 0 chr5 117344242 117344281 -82285869 - MLT2D LTR ERVL 0 515 477 396 0 0 0 chr5 117344282 117344326 -82285824 + (TG)n Simple_repeat Simple_repeat 2 45 0 3118 116 146 15 chr5 117344326 117344990 -82285160 - Tigger3(Golem) DNA MER2_type -1 3028 2278 602 195 42 0 chr5 117344962 117345080 -82285070 - Tigger3(Golem) DNA MER2_type -2900 129 7 * 228 35 0 0 chr5 117345083 117345112 -82285038 + (TA)n Simple_repeat Simple_repeat 1 29 0 244 145 16 16 chr5 117345258 117345320 -82284830 + (TA)n Simple_repeat Simple_repeat 2 63 0 1145 213 35 42 chr5 117345327 117345742 -82284408 - MLT2D LTR ERVL -48 416 2 338 244 55 47 chr5 117346303 117346430 -82283720 + MIR SINE MIR 135 262 0 1799 231 127 23 chr5 117346509 117347075 -82283075 - MLT1E2 LTR MaLR -1 625 1 1177 253 64 57 chr5 117348991 117349597 -82280553 - LTR19C LTR ERV1 0 779 1 946 226 78 22 chr5 117349984 117350214 -82279936 - MIR SINE MIR -13 249 7 219 288 14 41 chr5 117350632 117350705 -82279445 + MER5A DNA MER1_type 3 73 -116 1944 154 32 19 chr5 117351455 117351825 -82278325 - THE1C LTR MaLR 0 375 1 540 264 69 46 chr5 117352126 117352178 -82277972 - L2 LINE L2 -2 3311 3262 1556 188 144 31 chr5 117352178 117352561 -82277589 + MSTB LTR MaLR 1 426 0 540 264 69 46 chr5 117352561 117352724 -82277426 - L2 LINE L2 -51 3262 3091 242 349 156 0 chr5 117352754 117352863 -82277287 + L2 LINE L2 3136 3261 -11 1205 195 47 86 chr5 117352872 117353257 -82276893 - MLT1A2 LTR MaLR -4 370 1 640 207 118 24 chr5 117353317 117353486 -82276664 + MIR SINE MIR 18 202 -60 1566 172 37 79 chr5 117353545 117353952 -82276198 - MLT1B LTR MaLR 0 390 1 812 104 0 0 chr5 117353967 117354073 -82276077 - AluJb SINE Alu -6 306 201 42112 38 2 2 chr5 117354075 117360219 -82269931 + L1PA3 LINE L1 5 6152 -3 1224 217 0 0 chr5 117360246 117360458 -82269692 - AluJb SINE Alu -98 214 3 2158 124 18 47 chr5 117361476 117361862 -82268288 - THE1C LTR MaLR 0 375 1 2258 182 29 2 chr5 117362305 117362722 -82267428 - MSTA LTR MaLR 0 428 1 8487 186 18 7 chr5 117362724 117362923 -82267227 - MSTA-int LTR MaLR -2 1649 1454 1928 133 95 24 chr5 117362923 117363343 -82266807 - LTR7 LTR ERV1 0 450 1 8487 186 18 7 chr5 117363343 117364774 -82265376 - MSTA-int LTR MaLR -197 1454 1 2345 165 39 0 chr5 117364774 117365186 -82264964 - MSTA LTR MaLR 0 428 1 254 118 0 20 chr5 117367141 117367172 -82262978 + (TAA)n Simple_repeat Simple_repeat 2 33 -18 2208 104 0 3 chr5 117367172 117367469 -82262681 + AluSx SINE Alu 1 296 -16 254 118 0 20 chr5 117367469 117367488 -82262662 + (TAA)n Simple_repeat Simple_repeat 33 51 0 269 258 123 58 chr5 117368560 117368715 -82261435 - L2 LINE L2 -44 3269 3105 751 247 39 6 chr5 117368867 117369049 -82261101 - MER20 DNA MER1_type 0 219 32 1015 296 130 37 chr5 117369220 117369736 -82260414 - L2 LINE L2 -515 2799 2236 197 347 13 47 chr5 117370366 117370516 -82259634 - MIR SINE MIR -46 216 72 348 204 117 0 chr5 117371018 117371121 -82259029 - L1ME4a LINE L1 0 6121 6007 1621 269 118 14 chr5 117371259 117371835 -82258315 - L2 LINE L2 -454 2860 2225 3125 165 13 2 chr5 117371910 117372521 -82257629 + L1M2 LINE L1 2178 2795 -4054 1314 222 0 11 chr5 117372522 117372783 -82257367 + AluJo SINE Alu 55 312 0 9573 184 49 40 chr5 117372791 117375558 -82254592 + L1M2 LINE L1 2795 5717 -1131 4076 135 51 13 chr5 117375558 117376306 -82253844 + HSMAR2 DNA Mariner 511 1286 -16 2144 142 0 3 chr5 117376314 117376623 -82253527 - AluSx SINE Alu -4 308 1 1221 167 48 4 chr5 117377284 117377554 -82252596 - L1MC2 LINE L1 -9 6335 6054 1349 179 0 8 chr5 117377605 117377868 -82252282 - L1MC2 LINE L1 -296 6048 5788 282 263 0 0 chr5 117377888 117377964 -82252186 + MER34 LTR ERV1 21 96 -446 1574 195 98 19 chr5 117377968 117378426 -82251724 + LTR29 LTR ERV1 137 595 0 926 203 31 5 chr5 117378445 117378637 -82251513 - L1MC2 LINE L1 -678 5666 5470 785 174 56 5 chr5 117379925 117380138 -82250012 - L1MC2 LINE L1 -2557 5485 5262 714 207 0 7 chr5 117380172 117380307 -82249843 - AluJo SINE Alu -178 134 1 1536 245 34 10 chr5 117380307 117380830 -82249320 - L1MC2 LINE L1 -870 5276 4741 3605 136 20 1 chr5 117381521 117382444 -82247706 - L1PA16 LINE L1 -9 6157 5171 297 235 15 15 chr5 117384488 117384556 -82245594 + L2 LINE L2 3244 3311 -2 21 57 0 0 chr5 117384558 117384593 -82245557 + AT_rich Low_complexity Low_complexity 1 35 0 636 352 18 0 chr5 117385054 117385273 -82244877 - MIR SINE MIR -3 259 37 325 329 65 35 chr5 117386280 117386511 -82243639 - MIR SINE MIR -23 239 2 3967 77 13 4 chr5 117387404 117387982 -82242168 + LTR10C LTR ERV1 1 505 0 325 264 0 0 chr5 117388577 117388649 -82241501 + LTR16A1 LTR ERVL 386 457 0 426 190 89 113 chr5 117388861 117389108 -82241042 + MER112 DNA MER1_type 4 244 -16 958 223 15 5 chr5 117389806 117390012 -82240138 + MIR SINE MIR 9 216 -46 2123 161 46 145 chr5 117390028 117390416 -82239734 - MER50 LTR ERV1 -8 726 301 13095 99 11 0 chr5 117390416 117393103 -82237047 + L1PA7 LINE L1 3459 6135 -19 2157 81 0 0 chr5 117390417 117392131 -82238019 + L1P LINE L1 3460 5205 -1738 270 0 0 0 chr5 117392131 117392161 -82237989 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2157 81 0 0 chr5 117392161 117393158 -82236992 + L1P LINE L1 5204 6200 -743 2123 161 46 145 chr5 117393103 117393458 -82236692 - MER50 LTR ERV1 -433 301 105 * 229 188 62 0 chr5 117393462 117393510 -82236640 - MER50 LTR ERV1 -566 168 118 990 109 0 7 chr5 117393537 117393684 -82236466 - L1PA8 LINE L1 -8 6164 6019 1276 237 91 58 chr5 117393690 117394367 -82235783 - MER61E LTR ERV1 -7 772 28 715 212 13 7 chr5 117394410 117394561 -82235589 - HUERS-P3 LTR ERV1 -1 8918 8767 536 278 12 13 chr5 117394661 117394932 -82235218 - HERV9 LTR ERV1 -334 7978 5902 2646 89 3 11 chr5 117394946 117395304 -82234846 + THE1A LTR MaLR 1 355 0 27644 174 11 18 chr5 117395304 117400356 -82229794 - HERV9 LTR ERV1 -2773 6146 1131 611 157 0 0 chr5 117400356 117400464 -82229686 - MER50 LTR ERV1 -626 108 1 1314 190 77 85 chr5 117400705 117401174 -82228976 + MER4C LTR ERV1 1 465 0 622 172 57 13 chr5 117401380 117401537 -82228613 - Charlie2a DNA MER1_type 0 2862 2699 518 213 33 11 chr5 117401528 117401711 -82228439 - Charlie2a DNA MER1_type -1203 1659 1473 * 336 239 9 28 chr5 117401775 117401884 -82228266 - Charlie2b DNA MER1_type -2110 672 566 535 280 138 13 chr5 117401927 117402159 -82227991 - Charlie2b DNA MER1_type -2593 269 9 694 291 62 27 chr5 117403989 117404357 -82225793 + MLT1L LTR MaLR 146 526 -89 2367 201 72 28 chr5 117404378 117404921 -82225229 + MLT1F1 LTR MaLR 1 567 0 222 118 0 0 chr5 117405354 117405388 -82224762 + (A)n Simple_repeat Simple_repeat 1 34 0 3123 148 25 66 chr5 117407123 117407760 -82222390 - LTR36 LTR ERV1 0 611 1 1837 209 40 24 chr5 117409063 117409393 -82220757 - MLT1C LTR MaLR 0 467 127 1856 160 40 37 chr5 117409393 117409767 -82220383 + THE1C LTR MaLR 1 375 0 1837 209 40 24 chr5 117409767 117409890 -82220260 - MLT1C LTR MaLR -340 127 7 585 300 49 57 chr5 117411749 117412012 -82218138 + MIR SINE MIR 2 262 0 2772 218 48 11 chr5 117412681 117413306 -82216844 - MER82 DNA MER2_type -5 648 1 627 227 33 7 chr5 117414017 117414167 -82215983 - MER77 LTR ERV1 -4 601 448 1709 153 103 17 chr5 117414538 117414897 -82215253 - MLT1B LTR MaLR 0 390 1 26 30 0 0 chr5 117415461 117415494 -82214656 + AT_rich Low_complexity Low_complexity 1 33 0 761 293 56 0 chr5 117416003 117416235 -82213915 + MIR SINE MIR 13 257 -5 188 231 26 0 chr5 117416451 117416490 -82213660 - MIR SINE MIR 0 262 223 385 349 62 20 chr5 117416571 117416863 -82213287 + L2 LINE L2 2090 2393 -921 315 254 0 103 chr5 117416890 117417016 -82213134 - L2 LINE L2 -47 3266 3154 1745 200 3 0 chr5 117417553 117417848 -82212302 - AluJo SINE Alu -16 296 1 1513 17 0 0 chr5 117418527 117418701 -82211449 - L1PA4 LINE L1 -4 6151 5978 214 215 28 19 chr5 117418721 117418828 -82211322 + GA-rich Low_complexity Low_complexity 4 111 0 516 317 108 39 chr5 117418832 117419314 -82210836 - MLT1K LTR MaLR -10 578 64 252 0 0 0 chr5 117419316 117419344 -82210806 + (CA)n Simple_repeat Simple_repeat 1 28 0 312 293 68 27 chr5 117420728 117420875 -82209275 - MIR SINE MIR -1 261 109 4866 68 71 7 chr5 117422723 117423430 -82206720 - L1PA7 LINE L1 -2 6152 5401 3883 102 5 20 chr5 117423429 117424094 -82206056 + L1M4 LINE L1 4787 5445 -739 * 572 313 44 42 chr5 117424332 117424617 -82205533 - L1ME3A LINE L1 -222 5948 5660 916 255 52 0 chr5 117424617 117424829 -82205321 + MER58A DNA MER1_type 1 223 -1 572 313 44 42 chr5 117424829 117424997 -82205153 - L1ME3A LINE L1 -510 5660 5494 644 139 26 0 chr5 117425981 117426096 -82204054 + L1MD2 LINE L1 6191 6308 -51 189 321 135 67 chr5 117426752 117427079 -82203071 - L2 LINE L2 0 3272 2924 221 158 0 232 chr5 117427308 117427403 -82202747 + L3 LINE CR1 430 502 -1075 433 222 46 37 chr5 117427434 117427542 -82202608 + L3 LINE CR1 1249 1357 -220 252 77 0 0 chr5 117428710 117428749 -82201401 + (A)n Simple_repeat Simple_repeat 1 39 0 412 325 126 51 chr5 117429015 117429922 -82200228 + L1MEd LINE L1 244 1363 -1127 1865 164 4 0 chr5 117429922 117430239 -82199911 + AluSx SINE Alu 1 318 0 412 325 126 51 chr5 117430239 117430329 -82199821 + L1MEd LINE L1 1363 1445 -1045 492 293 80 73 chr5 117430400 117430923 -82199227 + L1ME LINE L1 3223 3749 -2380 229 150 100 0 chr5 117430926 117430986 -82199164 - L1MC4 LINE L1 -1341 6701 6636 24 67 0 0 chr5 117431481 117431526 -82198624 + AT_rich Low_complexity Low_complexity 1 45 0 430 343 50 25 chr5 117431549 117431791 -82198359 + L1ME LINE L1 4097 4344 -1785 287 227 81 36 chr5 117431795 117432042 -82198108 + L1ME LINE L1 4377 4634 -1495 313 314 174 0 chr5 117432252 117432459 -82197691 + L1ME LINE L1 4925 5167 -962 692 199 108 39 chr5 117432462 117432693 -82197457 + L1ME3A LINE L1 5902 6148 -22 236 220 34 0 chr5 117432993 117433052 -82197098 + L1ME LINE L1 5572 5632 -521 205 222 133 56 chr5 117433209 117433299 -82196851 + MER5C DNA MER1_type 11 107 -217 438 274 103 20 chr5 117434314 117434460 -82195690 - MIR3 SINE MIR -47 161 4 371 204 65 0 chr5 117435107 117435200 -82194950 - L2 LINE L2 -2611 703 605 316 268 31 0 chr5 117435751 117435848 -82194302 + LTR28 LTR ERV1 1 100 -920 2253 191 147 55 chr5 117435908 117436597 -82193553 + LTR28 LTR ERV1 121 1020 0 228 254 134 0 chr5 117436958 117437025 -82193125 - MIR3 SINE MIR -13 195 120 321 306 38 59 chr5 117437157 117437343 -82192807 - L1ME3A LINE L1 -9 6161 5980 654 240 33 96 chr5 117437421 117437617 -82192533 - L1ME3A LINE L1 -232 5938 5774 1887 140 3 10 chr5 117437617 117437909 -82192241 - AluSx SINE Alu -22 290 1 654 240 33 96 chr5 117437909 117438078 -82192072 - L1ME3A LINE L1 -396 5774 5596 375 23 0 0 chr5 117438095 117438139 -82192011 + (A)n Simple_repeat Simple_repeat 1 44 0 1150 273 56 15 chr5 117438149 117438611 -82191539 - MLT1L LTR MaLR -41 574 94 752 216 46 80 chr5 117438678 117439114 -82191036 - L1MC5 LINE L1 -27 7934 7514 22 0 0 0 chr5 117439974 117439996 -82190154 + AT_rich Low_complexity Low_complexity 1 22 0 716 210 31 74 chr5 117440198 117440427 -82189723 + MER20 DNA MER1_type 1 219 0 234 298 112 37 chr5 117440605 117440820 -82189330 + L2 LINE L2 2651 2881 -433 598 113 0 28 chr5 117440847 117440953 -82189197 + SVA Other Other 501 603 -783 21 0 0 0 chr5 117441022 117441043 -82189107 + AT_rich Low_complexity Low_complexity 1 21 0 415 299 85 28 chr5 117441629 117441806 -82188344 + L3 LINE CR1 1192 1378 -199 182 315 90 27 chr5 117442041 117442152 -82187998 + L2 LINE L2 2716 2833 -481 650 335 239 20 chr5 117442190 117442751 -82187399 + L3 LINE CR1 363 1046 -531 281 157 121 24 chr5 117442766 117442849 -82187301 + L3 LINE CR1 1191 1281 -296 2285 119 0 0 chr5 117443783 117444093 -82186057 + AluSx SINE Alu 1 310 -2 427 279 93 8 chr5 117444163 117444292 -82185858 - MER5A DNA MER1_type 0 189 50 3862 152 18 49 chr5 117444498 117445597 -82184553 + L1M2 LINE L1 4555 5613 -678 1570 235 85 70 chr5 117445612 117446285 -82183865 - MER45R DNA AcHobo -898 683 1 290 164 18 0 chr5 117448426 117448481 -82181669 - MLT1K LTR MaLR -8 580 525 265 373 9 0 chr5 117449674 117449784 -82180366 + L2 LINE L2 3162 3272 0 467 318 78 8 chr5 117450501 117450746 -82179404 - MIR SINE MIR 0 262 1 441 324 50 25 chr5 117450906 117451147 -82179003 - MLT1L LTR MaLR 0 615 369 385 273 130 0 chr5 117451684 117451838 -82178312 + MLT1J2 LTR MaLR 273 446 -4 4274 39 0 0 chr5 117452059 117452595 -82177555 + L1PA5 LINE L1 5630 6165 0 1843 163 7 16 chr5 117454788 117455095 -82175055 + AluSx SINE Alu 1 304 -8 2787 22 0 3 chr5 117455135 117455452 -82174698 - AluYb8 SINE Alu -2 316 1 930 219 65 0 chr5 117455492 117455693 -82174457 + MER58A DNA MER1_type 11 224 0 423 298 154 24 chr5 117455759 117456130 -82174020 - MLT1L LTR MaLR -49 538 149 327 330 16 80 chr5 117456132 117456320 -82173830 + MER5B DNA MER1_type 1 176 -2 278 297 65 58 chr5 117456454 117456592 -82173558 - L2 LINE L2 -2608 706 568 198 348 96 15 chr5 117456663 117456798 -82173352 - L2 LINE L2 -912 2402 2257 225 132 79 0 chr5 117457908 117457946 -82172204 - L2 LINE L2 -9 3304 3264 249 135 0 39 chr5 117458361 117458413 -82171737 - L2 LINE L2 0 3313 3264 300 329 178 14 chr5 117458541 117458754 -82171396 + L3b LINE CR1 1103 1350 -233 204 159 0 23 chr5 117459195 117459239 -82170911 + T-rich Low_complexity Low_complexity 2 44 0 41575 39 8 3 chr5 117459242 117465355 -82164795 - L1PA3 LINE L1 -3 6152 2 2055 159 33 56 chr5 117465518 117465997 -82164153 - L1MD1 LINE L1 -329 5913 5446 856 194 0 36 chr5 117466154 117466319 -82163831 - AluJb SINE Alu -18 294 136 6754 63 6 5 chr5 117467431 117468456 -82161694 + L1PA7 LINE L1 5121 6146 -8 933 163 12 35 chr5 117468462 117468634 -82161516 + AluSg/x SINE Alu 129 296 -16 467 284 15 8 chr5 117471303 117471437 -82158713 + MER5B DNA MER1_type 41 175 -3 234 198 78 52 chr5 117471663 117471779 -82158371 - HAL1 LINE L1 -1159 1348 1230 219 238 0 0 chr5 117471878 117471920 -82158230 + polypyrimidine Low_complexity Low_complexity 3 44 0 240 35 0 0 chr5 117472678 117472707 -82157443 + (TC)n Simple_repeat Simple_repeat 2 30 0 387 0 0 0 chr5 117472708 117472751 -82157399 + (TG)n Simple_repeat Simple_repeat 2 44 0 299 108 47 31 chr5 117474143 117474272 -82155878 + (TA)n Simple_repeat Simple_repeat 2 132 0 24 0 0 0 chr5 117474272 117474296 -82155854 + AT_rich Low_complexity Low_complexity 1 24 0 1904 161 22 69 chr5 117474444 117474849 -82155301 - MLT1B LTR MaLR -1 389 4 381 254 94 11 chr5 117476408 117476589 -82153561 + L1MC4a LINE L1 5636 5831 -1977 293 185 19 0 chr5 117476841 117476895 -82153255 + MIR SINE MIR 205 259 -3 360 330 64 0 chr5 117476903 117477106 -82153044 + ERVL LTR ERVL 1904 2119 -3645 1648 119 53 53 chr5 117477343 117477663 -82152487 - MER44D DNA MER2_type -19 590 1 23 33 0 0 chr5 117479405 117479435 -82150715 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr5 117479793 117479828 -82150322 + AT_rich Low_complexity Low_complexity 1 35 0 196 125 292 0 chr5 117479942 117479990 -82150160 - MIR3 SINE MIR -37 171 110 315 300 236 14 chr5 117480143 117480363 -82149787 + HAL1 LINE L1 162 430 -2077 450 335 79 17 chr5 117480392 117480747 -82149403 + HAL1 LINE L1 491 867 -1640 747 298 92 47 chr5 117481494 117481940 -82148210 + MLT1K LTR MaLR 85 550 -38 1684 125 69 43 chr5 117481940 117482244 -82147906 - AluSx SINE Alu 0 312 1 210 125 75 0 chr5 117482844 117482924 -82147226 + (TA)n Simple_repeat Simple_repeat 2 87 0 349 312 140 35 chr5 117482943 117483257 -82146893 - L3 LINE CR1 -27 1550 1204 23 0 0 0 chr5 117483295 117483318 -82146832 + AT_rich Low_complexity Low_complexity 1 23 0 319 257 0 55 chr5 117483319 117483428 -82146722 - MIR SINE MIR 0 262 160 265 212 30 15 chr5 117483716 117483782 -82146368 - L2 LINE L2 -1627 1687 1621 24466 110 9 11 chr5 117483993 117487917 -82142233 - L1P LINE L1 -2229 3917 2 2049 158 33 58 chr5 117488080 117488560 -82141590 - L1MD1 LINE L1 -329 5913 5446 856 194 0 36 chr5 117488717 117488882 -82141268 - AluJb SINE Alu -18 294 136 6754 63 6 5 chr5 117489994 117491019 -82139131 + L1PA7 LINE L1 5121 6146 -8 933 163 12 35 chr5 117491025 117491197 -82138953 + AluSg/x SINE Alu 127 294 -16 463 284 15 8 chr5 117493902 117494036 -82136114 + MER5B DNA MER1_type 41 175 -3 276 213 71 55 chr5 117494251 117494378 -82135772 - HAL1 LINE L1 -1149 1358 1230 219 238 0 0 chr5 117494477 117494519 -82135631 + polypyrimidine Low_complexity Low_complexity 3 44 0 240 35 0 0 chr5 117495277 117495306 -82134844 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 243 0 0 0 chr5 117495305 117495332 -82134818 + (TG)n Simple_repeat Simple_repeat 2 28 0 299 108 47 31 chr5 117496692 117496821 -82133329 + (TA)n Simple_repeat Simple_repeat 1 131 0 24 0 0 0 chr5 117496821 117496845 -82133305 + AT_rich Low_complexity Low_complexity 1 24 0 1919 161 22 69 chr5 117496993 117497398 -82132752 - MLT1B LTR MaLR -1 389 4 431 254 94 11 chr5 117498957 117499138 -82131012 + L1MC4a LINE L1 5636 5831 -1977 295 185 19 0 chr5 117499390 117499444 -82130706 + MIR SINE MIR 205 259 -3 454 320 64 0 chr5 117499452 117499655 -82130495 + ERVL LTR ERVL 1904 2119 -3645 1717 116 56 56 chr5 117499892 117500212 -82129938 - MER44D DNA MER2_type -19 590 1 271 266 38 0 chr5 117500326 117500405 -82129745 + ERVL LTR ERVL 3470 3551 -2213 23 33 0 0 chr5 117501954 117501984 -82128166 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr5 117502342 117502377 -82127773 + AT_rich Low_complexity Low_complexity 1 35 0 197 125 292 0 chr5 117502491 117502539 -82127611 - MIR3 SINE MIR -37 171 110 555 325 192 15 chr5 117502692 117503292 -82126858 + HAL1 LINE L1 162 867 -1640 186 309 86 0 chr5 117503294 117503375 -82126775 + MIR SINE MIR 134 221 -41 863 305 109 42 chr5 117503989 117504484 -82125666 + MLT1K LTR MaLR 23 550 -38 1660 121 68 52 chr5 117504484 117504791 -82125359 - AluSx SINE Alu 0 312 1 210 125 75 0 chr5 117505390 117505470 -82124680 + (TA)n Simple_repeat Simple_repeat 2 87 0 327 319 134 29 chr5 117505489 117505803 -82124347 - L3 LINE CR1 -27 1550 1204 23 0 0 0 chr5 117505841 117505864 -82124286 + AT_rich Low_complexity Low_complexity 1 23 0 327 257 0 55 chr5 117505865 117505974 -82124176 - MIR SINE MIR 0 262 160 1742 261 138 12 chr5 117506262 117506924 -82123226 - L2 LINE L2 -1627 1687 943 463 374 99 31 chr5 117507057 117507351 -82122799 - L2 LINE L2 0 3272 2959 * 646 377 103 11 chr5 117507343 117507778 -82122372 - L3 LINE CR1 -897 680 206 197 389 22 0 chr5 117509808 117509898 -82120252 + L2 LINE L2 3215 3306 -7 192 279 103 15 chr5 117510163 117510231 -82119919 + MIR SINE MIR 78 151 -57 753 263 85 20 chr5 117510523 117510770 -82119380 - L3b LINE CR1 -196 1387 1125 243 197 212 0 chr5 117511386 117511452 -82118698 + L1MB5 LINE L1 5743 5822 -362 1222 133 30 15 chr5 117511565 117511768 -82118382 - MER2 DNA MER2_type -139 206 1 1264 205 30 4 chr5 117511773 117512041 -82118109 + L1MB5 LINE L1 5835 6109 -65 263 158 0 0 chr5 117512130 117512188 -82117962 + L1MB4 LINE L1 6125 6183 0 251 362 38 0 chr5 117512298 117512403 -82117747 - L2 LINE L2 -19 3253 3145 24 53 0 0 chr5 117513307 117513345 -82116805 + AT_rich Low_complexity Low_complexity 1 38 0 936 223 30 93 chr5 117514648 117514948 -82115202 + MLT1E3 LTR MaLR 1 281 -343 921 209 74 8 chr5 117514953 117515393 -82114757 - MLT1D LTR MaLR -8 497 1 1330 222 13 80 chr5 117515393 117515425 -82114725 + MLT1E3 LTR MaLR 276 309 -315 1409 187 166 76 chr5 117515425 117515900 -82114250 + MLT2B1 LTR ERVL 3 520 0 1330 222 13 80 chr5 117515900 117516031 -82114119 + MLT1E3 LTR MaLR 309 447 -177 1481 194 7 23 chr5 117516031 117516330 -82113820 + AluJb SINE Alu 1 294 -18 1330 222 13 80 chr5 117516330 117516539 -82113611 + MLT1E3 LTR MaLR 447 624 0 21 0 0 0 chr5 117516575 117516596 -82113554 + AT_rich Low_complexity Low_complexity 1 21 0 497 151 94 19 chr5 117517156 117517262 -82112888 - L1MA9 LINE L1 -498 5793 5680 * 1380 185 27 13 chr5 117517213 117517620 -82112530 + L1MA9 LINE L1 5785 6300 -12 183 80 0 0 chr5 117517942 117517967 -82112183 + (CA)n Simple_repeat Simple_repeat 2 26 0 3955 284 81 25 chr5 117518367 117519784 -82110366 + L2 LINE L2 18 1512 -1802 283 309 60 18 chr5 117519822 117519990 -82110160 + LTR67 LTR ERVL 382 556 -1 475 337 49 40 chr5 117520441 117520910 -82109240 + HAL1b LINE L1 237 709 -639 3588 152 15 15 chr5 117521363 117521970 -82108180 + Tigger1 DNA MER2_type 1 607 -1811 214 289 0 53 chr5 117522043 117522119 -82108031 + L2 LINE L2 3199 3270 -2 7542 54 2 0 chr5 117522200 117523908 -82106242 - L1PA5 LINE L1 -18 6136 4426 2001 125 3 6 chr5 117523908 117524220 -82105930 + Tigger1 DNA MER2_type 609 919 -1499 4784 135 20 20 chr5 117524230 117524767 -82105383 + Tigger1 DNA MER2_type 1608 2148 -270 1960 130 7 0 chr5 117524767 117525087 -82105063 + AluSq SINE Alu 1 322 0 4784 135 20 20 chr5 117525087 117525358 -82104792 + Tigger1 DNA MER2_type 2147 2417 -1 1243 66 0 6 chr5 117525450 117525617 -82104533 - L1PA8 LINE L1 0 6172 6007 1254 167 8 38 chr5 117525617 117525847 -82104303 - AluJb SINE Alu -24 288 64 21 57 0 0 chr5 117526241 117526276 -82103874 + AT_rich Low_complexity Low_complexity 1 35 0 256 261 22 22 chr5 117526582 117526716 -82103434 + L1M4 LINE L1 4206 4339 -1807 8578 31 2 1 chr5 117526927 117528741 -82101409 + L1PA3 LINE L1 4356 6171 0 339 333 0 8 chr5 117529993 117530113 -82100037 + GA-rich Low_complexity Low_complexity 2 120 0 309 303 39 45 chr5 117530121 117530276 -82099874 + HAL1b LINE L1 1193 1346 -2 5230 143 40 25 chr5 117531571 117532382 -82097768 - L1PA15 LINE L1 -6 6159 5319 469 59 29 0 chr5 117532382 117532450 -82097700 - L1PA8 LINE L1 -7 6165 6096 5230 143 40 25 chr5 117532450 117532888 -82097262 - L1PA15 LINE L1 -846 5319 4889 840 196 0 0 chr5 117532904 117533072 -82097078 + L1PA7 LINE L1 2584 2751 -4098 10375 92 15 1 chr5 117533075 117534007 -82096143 + L1PA7 LINE L1 4545 5463 -1394 216 0 0 0 chr5 117534007 117534031 -82096119 + (TA)n Simple_repeat Simple_repeat 1 24 0 10375 92 15 1 chr5 117534031 117535371 -82094779 + L1PA7 LINE L1 5463 6853 -4 180 0 0 0 chr5 117535397 117535417 -82094733 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 399 263 172 73 chr5 117535543 117535915 -82094235 + MLT1I LTR MaLR 1 409 0 25 31 0 0 chr5 117536051 117536083 -82094067 + AT_rich Low_complexity Low_complexity 1 32 0 629 322 91 6 chr5 117536460 117536780 -82093370 + LTR33 LTR ERVL 118 464 -57 270 209 38 19 chr5 117536970 117537128 -82093022 + (TA)n Simple_repeat Simple_repeat 2 162 0 40487 86 17 11 chr5 117537140 117537642 -82092508 - HERVL-A2 LTR ERVL -153 5501 5003 2758 10 0 13 chr5 117537642 117537950 -82092200 + AluYa5 SINE Alu 1 304 -7 40487 86 17 11 chr5 117537950 117542917 -82087233 - HERVL-A2 LTR ERVL -651 5003 1 3275 83 20 2 chr5 117542917 117543362 -82086788 - MLT2A2 LTR ERVL 0 453 1 1048 221 21 45 chr5 117543412 117543648 -82086502 + L1M1 LINE L1 2986 3211 -4354 2698 39 0 0 chr5 117543648 117543957 -82086193 + AluY SINE Alu 1 309 -2 1048 221 21 45 chr5 117543957 117544095 -82086055 + L1M1 LINE L1 3211 3351 -4214 423 88 0 0 chr5 117544115 117544172 -82085978 - AluSc SINE Alu -23 286 230 1087 149 6 0 chr5 117544391 117544559 -82085591 + L1PA14 LINE L1 1 169 -7412 1900 148 7 0 chr5 117544560 117544838 -82085312 + AluSx SINE Alu 1 280 -32 15876 145 7 7 chr5 117544856 117547249 -82082901 + L1PA14 LINE L1 146 2537 -5044 13571 187 18 24 chr5 117547232 117549430 -82080720 + L1PA14 LINE L1 3441 5651 -1933 * 2513 111 24 14 chr5 117549430 117549801 -82080349 + THE1C LTR MaLR 1 375 0 9256 129 43 42 chr5 117549801 117551379 -82078771 + THE1C-int LTR MaLR 1 1580 0 2752 87 3 18 chr5 117551379 117551760 -82078390 + THE1C LTR MaLR 1 375 0 13571 187 18 24 chr5 117551760 117552595 -82077555 + L1PA14 LINE L1 5648 6452 -1132 474 184 20 31 chr5 117552597 117552695 -82077455 + AluS SINE Alu 1 97 -215 782 108 0 88 chr5 117552778 117552926 -82077224 + AluSg/x SINE Alu 148 282 -30 6150 130 8 1 chr5 117552941 117554087 -82076063 + L1PA14 LINE L1 6431 7582 -17 471 247 41 55 chr5 117554152 117554298 -82075852 + MER5B DNA MER1_type 29 172 -6 862 165 106 0 chr5 117554317 117554487 -82075663 + MER5A DNA MER1_type 2 189 0 222 91 0 0 chr5 117554791 117554824 -82075326 + (GGGA)n Simple_repeat Simple_repeat 3 35 0 366 246 80 29 chr5 117555700 117555838 -82074312 - MIR SINE MIR 0 262 118 192 241 69 17 chr5 117557700 117557758 -82072392 + L2 LINE L2 3159 3219 -94 207 347 14 0 chr5 117558891 117558963 -82071187 - L3b LINE CR1 -86 1497 1425 987 174 26 32 chr5 117559171 117559361 -82070789 - MER5A DNA MER1_type 0 189 1 1629 225 88 60 chr5 117559373 117560023 -82070127 - LTR68 LTR ERV1 -33 707 1 862 215 42 23 chr5 117560137 117560398 -82069752 + LTR37B LTR ERV1 198 463 -5 267 152 0 0 chr5 117561487 117561533 -82068617 + (CA)n Simple_repeat Simple_repeat 1 46 0 1477 223 94 42 chr5 117563232 117563712 -82066438 - MLT1D LTR MaLR 0 505 1 1527 288 114 43 chr5 117563861 117564187 -82065963 + HAL1 LINE L1 417 718 -1789 5761 184 83 10 chr5 117564187 117565541 -82064609 - Charlie1a DNA MER1_type -1 1454 1 1527 288 114 43 chr5 117565541 117565641 -82064509 + HAL1 LINE L1 718 809 -1698 2293 217 37 57 chr5 117565641 117566258 -82063892 - MER77 LTR ERV1 0 605 1 1527 288 114 43 chr5 117566258 117567085 -82063065 + HAL1 LINE L1 809 1760 -747 1786 120 14 0 chr5 117567119 117567402 -82062748 + L1MA5A LINE L1 6008 6294 -3 26 0 0 0 chr5 117567419 117567445 -82062705 + AT_rich Low_complexity Low_complexity 1 26 0 433 316 85 19 chr5 117567512 117567724 -82062426 - MIR SINE MIR -36 226 1 213 302 0 0 chr5 117567900 117567963 -82062187 + L2 LINE L2 3250 3312 -1 22 35 0 0 chr5 117568369 117568398 -82061752 + AT_rich Low_complexity Low_complexity 1 29 0 430 364 120 0 chr5 117569496 117569738 -82060412 - L2 LINE L2 -571 2743 2473 1107 136 32 108 chr5 117570176 117570426 -82059724 + Tigger1 DNA MER2_type 1 231 -2187 302 229 24 0 chr5 117570428 117570511 -82059639 - MER69 DNA AcHobo -91 2435 2351 1924 160 0 0 chr5 117571260 117571541 -82058609 - AluSx SINE Alu -31 281 1 24 53 0 0 chr5 117571737 117571775 -82058375 + AT_rich Low_complexity Low_complexity 1 38 0 1813 187 61 65 chr5 117572393 117572916 -82057234 - MER69 DNA AcHobo -165 2361 1841 2480 218 52 78 chr5 117572922 117573687 -82056463 - MER69 DNA AcHobo -1781 745 1 7406 176 34 3 chr5 117573822 117576057 -82054093 - L1PA13 LINE L1 0 6163 3872 2374 137 13 11 chr5 117576058 117576431 -82053719 + Tigger1 DNA MER2_type 219 592 -1826 1531 158 23 0 chr5 117576429 117576695 -82053455 + Tigger1 DNA MER2_type 2147 2418 0 * 2327 106 3 0 chr5 117576889 117577192 -82052958 + AluSg SINE Alu 1 304 -6 21 36 0 0 chr5 117577343 117577371 -82052779 + AT_rich Low_complexity Low_complexity 1 28 0 4004 199 47 13 chr5 117577648 117579060 -82051090 + L1MB7 LINE L1 4735 6183 -1 673 218 89 28 chr5 117579055 117579303 -82050847 + L1ME3A LINE L1 5688 5950 -220 * 2123 81 0 15 chr5 117580344 117580615 -82049535 + AluSx SINE Alu 35 301 -11 1602 138 13 4 chr5 117580939 117581178 -82048972 - AluSx SINE Alu -18 294 54 1804 102 43 51 chr5 117581186 117581559 -82048591 - L1PB1 LINE L1 0 6151 5782 189 0 0 0 chr5 117581559 117581580 -82048570 + (TA)n Simple_repeat Simple_repeat 1 21 0 231 234 0 43 chr5 117581580 117581674 -82048476 - L1MC4 LINE L1 -1339 6703 6614 * 3603 125 15 4 chr5 117581671 117582439 -82047711 - L1P5 LINE L1 -360 5791 5015 432 190 52 43 chr5 117584031 117584147 -82046003 + L1MA2 LINE L1 16 132 -7433 1757 203 0 0 chr5 117584147 117584443 -82045707 + AluJb SINE Alu 1 296 -16 7173 49 0 3 chr5 117584465 117585513 -82044637 - L1PA5 LINE L1 -4 6150 5104 15182 149 35 20 chr5 117585514 117589015 -82041135 + L1MA2 LINE L1 1954 5584 -2139 2054 130 27 10 chr5 117589015 117589314 -82040836 - AluSg SINE Alu -6 304 1 15182 149 35 20 chr5 117589314 117591487 -82038663 + L1MA2 LINE L1 5584 7723 0 966 57 0 0 chr5 117591844 117591966 -82038184 - L1PA2 LINE L1 -2 6153 6032 1084 107 30 0 chr5 117593152 117593321 -82036829 - L1PA13 LINE L1 -4 6159 5986 1272 199 159 49 chr5 117593321 117593749 -82036401 + L1MC4 LINE L1 6725 7199 -843 357 363 60 6 chr5 117593907 117594089 -82036061 + MLT1L LTR MaLR 424 615 0 180 0 0 0 chr5 117594511 117594531 -82035619 + (TG)n Simple_repeat Simple_repeat 2 21 0 2487 57 0 0 chr5 117594889 117595187 -82034963 + AluY SINE Alu 1 298 -13 207 114 0 0 chr5 117596126 117596161 -82033989 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 24 32 0 0 chr5 117596964 117596995 -82033155 + AT_rich Low_complexity Low_complexity 1 31 0 438 352 96 19 chr5 117597114 117597298 -82032852 + HAL1b LINE L1 55 223 -1125 1683 167 23 30 chr5 117597298 117597597 -82032553 + AluJb SINE Alu 1 297 -15 438 352 96 19 chr5 117597597 117597736 -82032414 + HAL1b LINE L1 223 403 -945 744 170 50 14 chr5 117597803 117597944 -82032206 + MER106B DNA MER1_type 1 146 -913 21 89 0 0 chr5 117597950 117598006 -82032144 + AT_rich Low_complexity Low_complexity 1 56 0 606 254 29 75 chr5 117598050 117598329 -82031821 + L1MC5 LINE L1 6753 7018 -943 2983 223 96 57 chr5 117598503 117599588 -82030562 + L1MC4 LINE L1 6241 6359 0 194 273 106 0 chr5 117599678 117599744 -82030406 + MIR SINE MIR 152 224 -38 675 253 7 0 chr5 117599752 117599902 -82030248 + MER106B DNA MER1_type 2 152 -907 551 330 135 9 chr5 117600499 117600817 -82029333 + HERVL LTR ERVL 4621 4978 -786 188 234 0 21 chr5 117601007 117601054 -82029096 + MIR SINE MIR 146 191 -71 413 304 17 0 chr5 117601078 117601226 -82028924 + HERVL LTR ERVL 5175 5301 -353 226 295 60 34 chr5 117601450 117601599 -82028551 + LTR16C LTR ERVL 155 307 -184 * 3304 116 71 12 chr5 117601573 117602145 -82028005 + Tigger3(Golem) DNA MER2_type 2138 2743 -286 665 199 52 45 chr5 117602145 117602371 -82027779 - LTR45 LTR ERV1 0 602 390 1437 178 71 7 chr5 117602664 117602945 -82027205 + Tigger3(Golem) DNA MER2_type 2731 3029 0 260 214 22 45 chr5 117602951 117603040 -82027110 + LTR16C LTR ERVL 354 440 -51 242 369 29 0 chr5 117603962 117604065 -82026085 + L2 LINE L2 3180 3285 -28 228 270 124 11 chr5 117604981 117605070 -82025080 + L2 LINE L2 3203 3301 -12 844 270 57 55 chr5 117605129 117605584 -82024566 + LTR16A1 LTR ERVL 2 457 0 198 245 213 32 chr5 117606865 117606959 -82023191 + MIR SINE MIR 24 134 -128 249 270 130 76 chr5 117608310 117608495 -82021655 - MLT1H LTR MaLR -271 278 84 319 323 127 49 chr5 117608568 117608915 -82021235 + L1MC4a LINE L1 5636 6009 -1799 2250 108 0 0 chr5 117608998 117609295 -82020855 + AluSg SINE Alu 1 297 -13 201 288 41 41 chr5 117610051 117610124 -82020026 - MIR3 SINE MIR -133 75 3 355 250 0 0 chr5 117611157 117611225 -82018925 - L2 LINE L2 -6 3266 3199 842 215 87 24 chr5 117611245 117611680 -82018470 + MLT1F1 LTR MaLR 24 567 0 285 261 52 52 chr5 117611692 117611826 -82018324 - L2 LINE L2 -86 3227 3094 1017 231 111 0 chr5 117611904 117612228 -82017922 + Charlie1b DNA MER1_type 164 523 0 269 315 67 45 chr5 117612229 117612407 -82017743 - L2 LINE L2 -505 2809 2628 1564 190 13 10 chr5 117614626 117614936 -82015214 - AluJo SINE Alu -1 311 1 827 216 22 57 chr5 117615951 117616178 -82013972 - MER20 DNA MER1_type 0 219 1 2513 165 32 21 chr5 117616586 117617052 -82013098 + MER70A LTR ERVL 2 472 0 2021 145 25 77 chr5 117620384 117620785 -82009365 + MLT1B LTR MaLR 11 390 0 201 236 36 36 chr5 117621384 117621439 -82008711 + MIR SINE MIR 89 143 -65 726 76 19 0 chr5 117622535 117622640 -82007510 + L1MA3 LINE L1 6199 6305 0 35 0 0 0 chr5 117622640 117622675 -82007475 + AT_rich Low_complexity Low_complexity 1 35 0 599 122 0 11 chr5 117623163 117623253 -82006897 + AluY SINE Alu 210 298 -13 439 373 11 0 chr5 117623253 117623430 -82006720 + MLT1K LTR MaLR 11 189 -399 257 200 106 71 chr5 117626922 117627007 -82003143 - MIR3 SINE MIR -15 193 106 931 263 24 28 chr5 117627030 117627285 -82002865 + MIR SINE MIR 7 260 -2 257 333 0 0 chr5 117627297 117627360 -82002790 - MIR SINE MIR -126 82 20 231 269 0 0 chr5 117627458 117627510 -82002640 + L2 LINE L2 3217 3268 -4 233 261 15 0 chr5 117627663 117627728 -82002422 + (TA)n Simple_repeat Simple_repeat 1 66 0 243 0 0 0 chr5 117627788 117627815 -82002335 + (TAAAAA)n Simple_repeat Simple_repeat 2 28 0 25 65 0 0 chr5 117627900 117627946 -82002204 + AT_rich Low_complexity Low_complexity 1 46 0 216 0 0 0 chr5 117628032 117628056 -82002094 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 16997 29 1 1 chr5 117628065 117630856 -81999294 - L1PA3 LINE L1 -4 6151 3358 1640 241 91 50 chr5 117631316 117631835 -81998315 + MLT1F1 LTR MaLR 1 565 -2 21 0 0 0 chr5 117631876 117631897 -81998253 + AT_rich Low_complexity Low_complexity 1 21 0 250 228 18 0 chr5 117632048 117632105 -81998045 + GA-rich Low_complexity Low_complexity 3 60 0 2461 148 3 4 chr5 117632107 117632279 -81997871 + L1MD3 LINE L1 7046 7217 -778 16376 134 24 18 chr5 117632279 117632953 -81997197 - Tigger4(Zombi) DNA MER2_type 0 2731 2062 2234 108 0 3 chr5 117632953 117633259 -81996891 + AluSg SINE Alu 1 305 -5 16376 134 24 18 chr5 117633259 117635299 -81994851 - Tigger4(Zombi) DNA MER2_type -669 2062 2 2461 148 3 4 chr5 117635299 117635687 -81994463 + L1MD3 LINE L1 7217 7796 -199 702 245 27 27 chr5 117635725 117635909 -81994241 - MLT1D LTR MaLR -321 184 1 388 254 18 0 chr5 117635909 117636019 -81994131 + L1MD3 LINE L1 7884 7995 0 261 0 0 0 chr5 117636379 117636408 -81993742 + (TA)n Simple_repeat Simple_repeat 1 29 0 341 301 11 11 chr5 117638535 117638628 -81991522 + MIR SINE MIR 20 112 -150 794 275 168 44 chr5 117638681 117639139 -81991011 + MLT1H LTR MaLR 35 549 0 363 237 21 11 chr5 117639141 117639234 -81990916 + MIR SINE MIR 160 253 -9 520 272 120 54 chr5 117639397 117639713 -81990437 - MLT1K LTR MaLR -108 480 144 1720 179 31 3 chr5 117640148 117640438 -81989712 - AluJb SINE Alu -12 300 3 182 327 0 18 chr5 117640525 117640580 -81989570 - L3 LINE CR1 -4 1573 1520 180 361 69 21 chr5 117640703 117640847 -81989303 - L3 LINE CR1 -461 1116 966 2014 116 0 11 chr5 117640868 117641143 -81989007 + AluSx SINE Alu 1 272 -40 792 319 152 41 chr5 117641328 117642105 -81988045 - L3 LINE CR1 -591 986 124 25 0 0 0 chr5 117642447 117642472 -81987678 + AT_rich Low_complexity Low_complexity 1 25 0 2313 94 7 0 chr5 117643221 117643518 -81986632 + AluSx SINE Alu 1 299 -13 262 105 0 0 chr5 117643653 117643691 -81986459 + Alu SINE Alu 1 38 -264 1384 143 0 0 chr5 117643697 117643893 -81986257 + AluSg/x SINE Alu 78 273 -39 21 0 0 0 chr5 117643897 117643918 -81986232 + AT_rich Low_complexity Low_complexity 1 21 0 371 100 50 33 chr5 117643955 117644075 -81986075 + (TATAA)n Simple_repeat Simple_repeat 1 122 0 26 30 0 0 chr5 117644368 117644401 -81985749 + AT_rich Low_complexity Low_complexity 1 33 0 2030 115 24 7 chr5 117645058 117645346 -81984804 + AluSx SINE Alu 1 293 -19 491 325 65 36 chr5 117645515 117646035 -81984115 + L1MEd LINE L1 425 959 -5571 323 293 149 53 chr5 117646048 117646236 -81983914 + L1MEd LINE L1 1004 1209 -5321 298 191 209 0 chr5 117646318 117646428 -81983722 + L1MEd LINE L1 1306 1438 -5092 439 280 18 18 chr5 117646656 117646824 -81983326 + L1MEd LINE L1 1848 2026 -4525 577 212 168 7 chr5 117646830 117646967 -81983183 - MER5A DNA MER1_type -22 167 9 28 19 0 56 chr5 117647237 117647269 -81982881 + AT_rich Low_complexity Low_complexity 1 30 -21 1984 169 0 0 chr5 117647269 117647571 -81982579 - AluJb SINE Alu -10 302 1 28 19 0 56 chr5 117647571 117647592 -81982558 + AT_rich Low_complexity Low_complexity 30 51 0 2341 97 0 3 chr5 117647595 117647895 -81982255 - AluSq SINE Alu -14 299 1 1138 278 85 51 chr5 117647968 117648228 -81981922 + L1MEd LINE L1 2367 2617 -3923 1733 170 103 0 chr5 117648228 117648557 -81981593 + MLT1A1 LTR MaLR 1 363 -2 1138 278 85 51 chr5 117648557 117648799 -81981351 + L1MEd LINE L1 2617 2849 -3691 1847 171 0 10 chr5 117648799 117649104 -81981046 + AluJb SINE Alu 1 302 -10 2316 86 0 19 chr5 117649106 117649421 -81980729 + AluSc SINE Alu 1 309 0 1138 278 85 51 chr5 117649421 117649439 -81980711 + L1MEd LINE L1 2849 2865 -3675 198 0 0 0 chr5 117649439 117649461 -81980689 + (GA)n Simple_repeat Simple_repeat 2 23 0 1138 278 85 51 chr5 117649461 117649856 -81980294 + L1MEd LINE L1 2865 3318 -3222 409 296 62 19 chr5 117650757 117651064 -81979086 + L1MEd LINE L1 3723 4042 -2498 22 35 0 0 chr5 117651794 117651823 -81978327 + AT_rich Low_complexity Low_complexity 1 29 0 558 213 55 27 chr5 117651909 117652092 -81978058 + L1MEd LINE L1 4199 4386 -2154 1255 198 68 47 chr5 117652152 117652557 -81977593 - MLT2B1 LTR ERVL -68 452 1 259 239 15 0 chr5 117652573 117652640 -81977510 + L1MEd LINE L1 4944 5011 -1529 413 152 25 0 chr5 117652665 117652744 -81977406 + HSMAR2 DNA Mariner 660 740 -562 288 290 11 0 chr5 117652912 117653005 -81977145 + L1MEd LINE L1 5141 5234 -1306 1159 199 234 26 chr5 117653281 117653699 -81976451 - MLT1D LTR MaLR 0 505 1 238 345 81 14 chr5 117654158 117654367 -81975783 - MIR SINE MIR -12 250 28 2360 117 50 8 chr5 117654389 117654749 -81975401 - THE1C LTR MaLR 0 375 1 441 129 47 0 chr5 117655034 117655119 -81975031 - L1MA10 LINE L1 0 6334 6246 229 309 37 15 chr5 117655366 117655502 -81974648 + L2 LINE L2 2764 2902 -412 1116 167 111 4 chr5 117655562 117655752 -81974398 + MER33 DNA MER1_type 25 254 -2331 2226 91 6 28 chr5 117655752 117656070 -81974080 - AluSq SINE Alu -1 312 2 1116 167 111 4 chr5 117656070 117656149 -81974001 + MER33 DNA MER1_type 254 323 -1 336 257 101 9 chr5 117656246 117656355 -81973795 + L2 LINE L2 3193 3311 -2 269 282 90 0 chr5 117658507 117658585 -81971565 - L2 LINE L2 -44 3228 3144 1899 119 18 11 chr5 117660433 117660719 -81969431 + AluSx SINE Alu 21 308 -4 287 268 134 26 chr5 117662264 117662458 -81967692 + L2 LINE L2 2848 3062 -251 555 247 157 0 chr5 117662567 117662745 -81967405 - MER58C DNA MER1_type -3 212 7 289 261 170 39 chr5 117663022 117663175 -81966975 - MIR SINE MIR -75 187 15 587 272 63 42 chr5 117663282 117663671 -81966479 + LTR16A LTR ERVL 13 444 -6 431 266 64 85 chr5 117663877 117664065 -81966085 - L3 LINE CR1 -991 586 403 274 214 0 0 chr5 117664754 117664810 -81965340 - MER3 DNA MER1_type -153 56 1 192 152 0 0 chr5 117665176 117665209 -81964941 + (TATG)n Simple_repeat Simple_repeat 2 34 0 907 94 123 0 chr5 117665367 117665538 -81964612 + L1MA9 LINE L1 6110 6301 -11 2209 133 0 3 chr5 117668090 117668391 -81961759 + AluSx SINE Alu 1 300 -12 1013 155 78 15 chr5 117668725 117668931 -81961219 - MER20 DNA MER1_type 0 219 1 651 264 80 40 chr5 117668947 117669246 -81960904 - L2 LINE L2 -2578 736 426 251 203 51 0 chr5 117669274 117669353 -81960797 + L1ME4a LINE L1 5991 6073 -48 35 71 0 0 chr5 117678313 117678383 -81951767 + AT_rich Low_complexity Low_complexity 1 70 0 210 143 0 0 chr5 117678389 117678424 -81951726 + (TATATG)n Simple_repeat Simple_repeat 1 35 0 749 177 0 0 chr5 117678475 117678599 -81951551 - FLAM_A SINE Alu -9 124 1 611 307 137 8 chr5 117679049 117679407 -81950743 + L2 LINE L2 2282 2685 -629 2466 90 0 0 chr5 117679413 117679724 -81950426 - AluSq SINE Alu -2 311 1 25 0 0 0 chr5 117679754 117679779 -81950371 + AT_rich Low_complexity Low_complexity 1 25 0 1252 234 36 45 chr5 117679811 117680229 -81949921 - MLT1D LTR MaLR -91 414 1 5625 235 112 34 chr5 117680253 117683839 -81946311 + L1ME2 LINE L1 1841 5148 -1085 2488 43 3 3 chr5 117683839 117684140 -81946010 + AluY SINE Alu 1 301 -10 5625 235 112 34 chr5 117684140 117684460 -81945690 + L1ME2 LINE L1 5148 5442 -791 1994 124 48 0 chr5 117684460 117684750 -81945400 + AluSx SINE Alu 1 304 -8 5625 235 112 34 chr5 117684750 117684934 -81945216 + L1ME2 LINE L1 5442 6223 -10 312 248 37 52 chr5 117687490 117687661 -81942489 - Charlie8 DNA MER1_type -2216 201 22 358 271 125 56 chr5 117689847 117689991 -81940159 + MIR3 SINE MIR 48 201 -7 299 220 87 92 chr5 117691234 117691407 -81938743 - MIR SINE MIR -21 241 70 199 411 9 0 chr5 117692694 117692801 -81937349 - MIR SINE MIR -118 144 37 23 0 0 0 chr5 117693413 117693436 -81936714 + AT_rich Low_complexity Low_complexity 1 23 0 270 236 16 159 chr5 117695221 117695258 -81934892 - MIR3 SINE MIR -32 176 135 222 37 0 0 chr5 117695258 117695285 -81934865 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2248 82 7 0 chr5 117695292 117695574 -81934576 - AluSp SINE Alu -29 284 1 270 236 16 159 chr5 117695574 117695653 -81934497 - MIR3 SINE MIR -79 129 83 755 188 84 70 chr5 117695653 117695866 -81934284 - MER20 DNA MER1_type -3 216 1 270 236 16 159 chr5 117695866 117695922 -81934228 - MIR3 SINE MIR -125 83 21 203 324 27 0 chr5 117696321 117696395 -81933755 - MIR3 SINE MIR -30 178 103 524 295 59 49 chr5 117696934 117697427 -81932723 + MLT1H1 LTR MaLR 2 549 0 22 0 0 0 chr5 117697525 117697547 -81932603 + AT_rich Low_complexity Low_complexity 1 22 0 301 282 179 38 chr5 117697859 117698199 -81931951 + L2 LINE L2 511 898 -2416 560 335 104 0 chr5 117698233 117698463 -81931687 + MIR SINE MIR 9 262 0 899 352 116 17 chr5 117698491 117699303 -81930847 + L2 LINE L2 925 1816 -1498 1375 301 97 48 chr5 117699422 117700032 -81930118 - HAL1 LINE L1 -324 2183 1604 2231 106 7 3 chr5 117700032 117700333 -81929817 - AluSq SINE Alu -11 302 1 1375 301 97 48 chr5 117700333 117701206 -81928944 - HAL1 LINE L1 -903 1604 628 328 312 128 0 chr5 117701236 117701377 -81928773 - HAL1 LINE L1 -1802 705 547 613 360 121 17 chr5 117701377 117702307 -81927843 + L2 LINE L2 2036 3068 -204 412 232 30 0 chr5 117702330 117702429 -81927721 + L1ME3A LINE L1 6064 6165 -5 320 228 174 22 chr5 117703848 117703940 -81926210 + MIR SINE MIR 45 150 -58 270 333 87 20 chr5 117704446 117704596 -81925554 + MIR SINE MIR 101 260 -2 765 120 0 48 chr5 117704921 117705046 -81925104 + FLAM_C SINE Alu 1 119 -24 25 31 0 0 chr5 117705046 117705078 -81925072 + AT_rich Low_complexity Low_complexity 1 32 0 2055 108 29 20 chr5 117705087 117705393 -81924757 + AluSg SINE Alu 1 309 -1 2177 86 17 14 chr5 117705764 117706055 -81924095 + AluSp SINE Alu 3 294 -19 31 58 0 0 chr5 117706075 117706127 -81924023 + AT_rich Low_complexity Low_complexity 1 52 0 444 321 12 6 chr5 117706806 117706968 -81923182 - MIR SINE MIR -48 214 52 5432 145 20 59 chr5 117708850 117710076 -81920074 + L1PA16 LINE L1 4540 5668 -498 2203 107 0 0 chr5 117710076 117710374 -81919776 + AluSc SINE Alu 1 298 -11 5432 145 20 59 chr5 117710374 117710853 -81919297 + L1PA16 LINE L1 5668 6164 -2 885 229 91 13 chr5 117713089 117713320 -81916830 - MIR SINE MIR 0 262 14 2285 83 3 20 chr5 117713412 117713713 -81916437 + AluSg SINE Alu 1 296 -14 2197 124 0 7 chr5 117714398 117714704 -81915446 - AluSx SINE Alu -8 304 1 2299 109 0 16 chr5 117715536 117715848 -81914302 - AluSx SINE Alu -5 307 1 2380 81 0 10 chr5 117716676 117716986 -81913164 + AluY SINE Alu 1 307 -4 24 32 0 0 chr5 117717129 117717160 -81912990 + AT_rich Low_complexity Low_complexity 1 31 0 216 271 0 0 chr5 117717224 117717272 -81912878 + MIR SINE MIR 213 260 -2 2515 65 0 3 chr5 117717678 117717987 -81912163 + AluY SINE Alu 4 311 0 1834 112 105 0 chr5 117719171 117719438 -81910712 - AluSx SINE Alu -17 295 1 1579 211 94 47 chr5 117719574 117719656 -81910494 - Charlie2 DNA MER1_type -293 2569 2492 2178 99 52 25 chr5 117719656 117720019 -81910131 + THE1C LTR MaLR 1 373 -2 1579 211 94 47 chr5 117720019 117720221 -81909929 - Charlie2 DNA MER1_type -370 2492 2301 2065 144 0 3 chr5 117720221 117720512 -81909638 - AluSx SINE Alu -22 290 1 1579 211 94 47 chr5 117720512 117720909 -81909241 - Charlie2 DNA MER1_type -561 2301 1855 389 277 128 16 chr5 117720953 117721141 -81909009 - Charlie2 DNA MER1_type -2534 248 40 1022 229 111 13 chr5 117721343 117721658 -81908492 + MER39 LTR ERV1 362 707 0 610 293 28 63 chr5 117721876 117722129 -81908021 + MIR SINE MIR 15 258 -4 1572 174 40 14 chr5 117772371 117772647 -81857503 + AluJo SINE Alu 6 288 -24 323 254 22 37 chr5 117773940 117774074 -81856076 + L1ME4a LINE L1 5960 6091 -30 2128 107 0 7 chr5 117776613 117776903 -81853247 - AluSx SINE Alu -17 295 8 2149 111 0 35 chr5 117777130 117777445 -81852705 + AluSx SINE Alu 1 304 -8 878 145 12 18 chr5 117777809 117777975 -81852175 + L1MB3 LINE L1 6016 6180 -3 711 187 0 0 chr5 117778865 117778988 -81851162 + FLAM_C SINE Alu 1 123 -10 364 230 0 0 chr5 117779456 117779530 -81850620 + MIR SINE MIR 157 230 -32 598 209 131 0 chr5 117780775 117780928 -81849222 - MLT1E2 LTR MaLR 0 626 454 503 292 7 0 chr5 117780928 117781072 -81849078 - LTR53 LTR ERVL -374 145 1 182 88 0 29 chr5 117781253 117781287 -81848863 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 283 279 91 79 chr5 117782005 117782170 -81847980 - L2 LINE L2 0 3272 3106 744 231 58 0 chr5 117784138 117784311 -81845839 - MIR SINE MIR 0 262 80 3496 259 235 12 chr5 117784390 117786020 -81844130 + L2 LINE L2 839 2832 -482 262 330 0 18 chr5 117786184 117786293 -81843857 + MLT-int LTR MaLR 410 516 -1219 639 62 0 0 chr5 117787188 117787268 -81842882 - AluY SINE Alu -16 295 216 291 354 31 66 chr5 117787506 117787763 -81842387 - L2 LINE L2 -461 2853 2606 632 230 128 76 chr5 117787818 117788262 -81841888 + MLT1G1 LTR MaLR 45 595 0 544 302 158 4 chr5 117788264 117788542 -81841608 - L3 LINE CR1 -801 776 456 2972 253 38 55 chr5 117791041 117792453 -81837697 - L1M4c LINE L1 -4817 1829 352 186 208 0 0 chr5 117792560 117792608 -81837542 + CT-rich Low_complexity Low_complexity 1 48 0 224 241 0 121 chr5 117792609 117792692 -81837458 - L2 LINE L2 -5 3267 3195 899 191 19 0 chr5 117792857 117793014 -81837136 - AluSg/x SINE Alu -16 296 137 2056 139 0 0 chr5 117793227 117793514 -81836636 - AluSx SINE Alu -25 287 1 21 57 0 0 chr5 117794296 117794331 -81835819 + AT_rich Low_complexity Low_complexity 1 35 0 3172 144 20 9 chr5 117794417 117794958 -81835192 + L1MC1 LINE L1 5781 6327 -6 34 89 0 0 chr5 117794962 117795052 -81835098 + AT_rich Low_complexity Low_complexity 1 90 0 409 264 48 0 chr5 117795220 117795345 -81834805 - MER20 DNA MER1_type -58 161 31 313 194 15 0 chr5 117795693 117795760 -81834390 - FLAM SINE Alu 0 133 66 2371 69 0 0 chr5 117795839 117796127 -81834023 + AluY SINE Alu 1 288 -23 216 296 0 0 chr5 117796645 117796699 -81833451 + GA-rich Low_complexity Low_complexity 3 56 0 6347 76 21 10 chr5 117797912 117798684 -81831466 - LTR17 LTR ERV1 0 780 1 2499 48 0 0 chr5 117798684 117798976 -81831174 - HERV17 LTR ERV1 0 8626 8335 49590 52 12 1 chr5 117799000 117804952 -81825198 - HERV17 LTR ERV1 -2609 6017 1 6401 56 34 17 chr5 117804952 117805719 -81824431 - LTR17 LTR ERV1 0 780 1 712 234 196 75 chr5 117806465 117806837 -81823313 - MLT1J LTR MaLR -34 477 61 419 313 35 0 chr5 117807055 117807170 -81822980 - L2 LINE L2 -25 3247 3129 41259 76 4 3 chr5 117807263 117813428 -81816722 - L1PA8 LINE L1 -1 6171 1 196 296 41 71 chr5 117813496 117813594 -81816556 + L2 LINE L2 441 535 -2779 1624 182 29 51 chr5 117814525 117814794 -81815356 + MER2 DNA MER2_type 1 262 -82 2221 129 3 0 chr5 117814794 117815105 -81815045 - AluSx SINE Alu 0 312 1 1624 182 29 51 chr5 117815105 117815186 -81814964 + MER2 DNA MER2_type 262 343 -1 549 55 0 27 chr5 117815435 117815508 -81814642 - L1PA5 LINE L1 -6 6148 6078 22 56 0 0 chr5 117815561 117815597 -81814553 + AT_rich Low_complexity Low_complexity 1 36 0 1657 151 41 163 chr5 117815650 117816134 -81814016 - MSTB LTR MaLR 0 426 2 243 270 230 7 chr5 117816145 117816297 -81813853 + MIR SINE MIR 76 261 -1 287 304 95 36 chr5 117816521 117816689 -81813461 - L2 LINE L2 -10 3262 3085 245 286 95 0 chr5 117817316 117817400 -81812750 - L2 LINE L2 -12 3301 3210 277 317 14 7 chr5 117818173 117818315 -81811835 - L1M LINE L1 -755 5407 5265 236 208 42 0 chr5 117818335 117818383 -81811767 - MIR SINE MIR 0 262 213 203 122 24 24 chr5 117818454 117818495 -81811655 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 222 37 0 0 chr5 117819795 117819822 -81810328 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 824 303 55 27 chr5 117819906 117820236 -81809914 - MER102b DNA MER1_type 0 341 3 324 0 0 0 chr5 117820526 117820562 -81809588 + (TG)n Simple_repeat Simple_repeat 2 37 0 317 271 135 0 chr5 117820765 117820861 -81809289 - MER91B DNA MER1_type -5 185 77 2283 108 0 13 chr5 117821225 117821539 -81808611 + AluSg SINE Alu 1 310 0 416 310 62 0 chr5 117822014 117822143 -81808007 - MLT1J LTR MaLR -283 228 92 1698 136 12 16 chr5 117823458 117823709 -81806441 + AluJo SINE Alu 33 282 -30 1431 156 3 89 chr5 117823725 117824040 -81806110 - AluJo SINE Alu -22 290 3 1810 130 33 30 chr5 117827346 117827645 -81802505 + AluSx SINE Alu 1 300 -12 4840 189 23 79 chr5 117828066 117828635 -81801515 - MER45B DNA AcHobo -541 1040 561 2251 120 0 0 chr5 117828635 117828934 -81801216 + AluSg SINE Alu 1 299 -11 4840 189 23 79 chr5 117828934 117829466 -81800684 - MER45B DNA AcHobo -1020 561 1 195 290 32 0 chr5 117829472 117829534 -81800616 - MIR SINE MIR -26 236 173 1307 281 109 2 chr5 117830810 117831279 -81798871 + LTR33 LTR ERVL 3 521 0 554 197 127 25 chr5 117831547 117831700 -81798450 - MIR SINE MIR -65 143 5 245 284 0 68 chr5 117832895 117832969 -81797181 - L2 LINE L2 -4 3309 3241 1962 144 3 3 chr5 117833271 117833569 -81796581 + AluSx SINE Alu 1 298 -14 281 315 70 21 chr5 117833850 117833993 -81796157 + L2 LINE L2 2953 3102 -170 23 33 0 0 chr5 117835378 117835408 -81794742 + AT_rich Low_complexity Low_complexity 1 30 0 1014 255 217 19 chr5 117835434 117835929 -81794221 - MLT1H1 LTR MaLR -5 550 1 280 376 33 28 chr5 117836039 117836252 -81793898 - MIR SINE MIR -29 233 20 1462 213 121 20 chr5 117836278 117836724 -81793426 + Charlie1b DNA MER1_type 32 522 -1 411 223 21 11 chr5 117836815 117836909 -81793241 - MIR SINE MIR -62 146 52 1132 224 76 55 chr5 117837155 117837499 -81792651 + MLT1H1 LTR MaLR 202 552 -3 1709 222 145 27 chr5 117837772 117838839 -81791311 + L1MC4a LINE L1 6650 8036 -6 270 184 0 0 chr5 117840829 117840878 -81789272 - MIR SINE MIR -55 207 159 458 239 108 68 chr5 117840907 117841129 -81789021 - MIR SINE MIR -30 232 2 389 36 18 0 chr5 117841460 117841515 -81788635 + (CA)n Simple_repeat Simple_repeat 2 57 0 327 310 65 86 chr5 117841725 117842096 -81788054 + HAL1 LINE L1 1032 1394 -1113 759 196 43 0 chr5 117842114 117842277 -81787873 + MER110A LTR ERV1 1 170 -298 548 227 107 9 chr5 117842338 117842557 -81787593 + MER110A LTR ERV1 268 487 -2 392 271 154 23 chr5 117842611 117842825 -81787325 + HAL1 LINE L1 1472 1713 -794 23 68 0 0 chr5 117843012 117843056 -81787094 + AT_rich Low_complexity Low_complexity 1 44 0 562 77 0 0 chr5 117843156 117843221 -81786929 + AluSq/x SINE Alu 67 131 -182 2132 90 7 0 chr5 117843225 117843502 -81786648 + AluSg SINE Alu 21 299 -11 251 268 24 0 chr5 117843860 117843942 -81786208 + L1MC/D LINE L1 5736 5819 -1989 2419 83 0 0 chr5 117843949 117844249 -81785901 + AluY SINE Alu 1 300 -11 375 325 147 0 chr5 117844477 117844634 -81785516 + MIR3 SINE MIR 18 197 -11 1569 186 7 27 chr5 117844653 117844949 -81785201 + AluJo SINE Alu 1 290 -22 187 241 93 0 chr5 117845696 117845750 -81784400 - L2 LINE L2 -4 3268 3210 1856 182 0 7 chr5 117846223 117846525 -81783625 + AluJo SINE Alu 1 300 -12 1974 152 0 0 chr5 117846817 117847113 -81783037 + AluY SINE Alu 1 296 -15 220 258 113 16 chr5 117847322 117847384 -81782766 - MIR SINE MIR -102 106 39 1318 174 125 3 chr5 117847839 117848126 -81782024 + MER33 DNA MER1_type 1 322 -2 368 232 37 0 chr5 117848240 117848322 -81781828 + MIR SINE MIR 55 139 -69 189 333 49 12 chr5 117848713 117848794 -81781356 + MIR SINE MIR 80 163 -99 401 308 68 0 chr5 117849368 117849501 -81780649 - MIR SINE MIR -119 143 2 421 273 33 60 chr5 117849840 117850023 -81780127 + MIR SINE MIR 10 187 -75 4973 133 17 56 chr5 117852723 117853659 -81776491 + MER4D LTR ERV1 2 660 -4 554 284 138 34 chr5 117854392 117854712 -81775438 + L2 LINE L2 2542 2894 -420 195 278 123 74 chr5 117854841 117855003 -81775147 - L2 LINE L2 -221 3051 2882 256 132 0 0 chr5 117855315 117855353 -81774797 + MLT1I LTR MaLR 1 38 -371 228 340 0 0 chr5 117856151 117856201 -81773949 - L2 LINE L2 -14 3258 3209 540 294 64 0 chr5 117856220 117856407 -81773743 - MIR SINE MIR 0 262 64 250 331 44 25 chr5 117856588 117856748 -81773402 - L2 LINE L2 -227 3086 2924 291 278 111 58 chr5 117857147 117857507 -81772643 + L2 LINE L2 2813 3191 -122 467 236 79 12 chr5 117857518 117857706 -81772444 + MER58A DNA MER1_type 4 224 0 246 274 32 53 chr5 117857727 117857822 -81772328 + L2 LINE L2 3179 3271 -1 234 228 29 52 chr5 117858221 117858315 -81771835 + (TAAA)n Simple_repeat Simple_repeat 3 95 -40 2077 127 0 7 chr5 117858315 117858606 -81771544 - AluSx SINE Alu -23 289 1 234 228 29 52 chr5 117858606 117858647 -81771503 + (TAAA)n Simple_repeat Simple_repeat 95 135 0 303 327 13 51 chr5 117858652 117858808 -81771342 - MIR3 SINE MIR -21 187 38 1027 194 21 5 chr5 117859022 117859208 -81770942 - MER5A DNA MER1_type 0 189 1 829 257 113 42 chr5 117859669 117860023 -81770127 + L2 LINE L2 2932 3310 -3 790 179 0 0 chr5 117860401 117860518 -81769632 + AluJb SINE Alu 2 118 -194 285 29 0 0 chr5 117860524 117860558 -81769592 + (CA)n Simple_repeat Simple_repeat 2 35 0 823 269 114 0 chr5 117862072 117862291 -81767859 + MIR SINE MIR 1 244 -18 219 236 0 0 chr5 117862317 117862389 -81767761 + (CCA)n Simple_repeat Simple_repeat 1 72 0 316 226 87 83 chr5 117862494 117862680 -81767470 + L1MC5 LINE L1 7436 7625 -336 927 234 0 12 chr5 117862680 117862847 -81767303 + FAM SINE Alu 1 165 -10 316 226 87 83 chr5 117862847 117862925 -81767225 + L1MC5 LINE L1 7625 7701 -260 552 202 84 0 chr5 117862943 117863062 -81767088 - MER3 DNA MER1_type -7 202 74 291 226 94 47 chr5 117863105 117863211 -81766939 + L1MC5 LINE L1 7714 7824 -137 1132 210 75 44 chr5 117863259 117863621 -81766529 + MLT2C1 LTR ERVL 11 383 -14 200 225 25 0 chr5 117863715 117863755 -81766395 + L2 LINE L2 3214 3254 -18 486 237 183 23 chr5 117864065 117864327 -81765823 + L1ME4a LINE L1 5737 6040 -81 269 167 33 33 chr5 117864336 117864396 -81765754 - L1ME2 LINE L1 -9 6155 6096 202 298 0 0 chr5 117864450 117864497 -81765653 + (TG)n Simple_repeat Simple_repeat 2 48 0 222 37 0 0 chr5 117864526 117864553 -81765597 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 420 20 0 0 chr5 117864552 117864601 -81765549 + (CA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr5 117864707 117864729 -81765421 + AT_rich Low_complexity Low_complexity 1 22 0 2458 85 7 0 chr5 117864988 117865293 -81764857 - AluSg SINE Alu -3 307 1 718 138 17 0 chr5 117865988 117866104 -81764046 + Charlie1a DNA MER1_type 46 163 -1292 867 245 19 14 chr5 117868778 117868986 -81761164 + MER3 DNA MER1_type 1 209 0 525 209 43 17 chr5 117868994 117869109 -81761041 - MER5B DNA MER1_type 0 178 61 4455 132 28 14 chr5 117869117 117869823 -81760327 - L1MA4A LINE L1 -7 6296 5581 4792 181 22 33 chr5 117869840 117870851 -81759299 + L1 LINE L1 3072 4071 -2075 1879 184 84 16 chr5 117870838 117871289 -81758861 - L1 LINE L1 -2927 4281 3800 * 4026 240 52 40 chr5 117871320 117872726 -81757424 - L1 LINE L1 -3954 3255 1087 577 243 195 9 chr5 117872788 117872998 -81757152 + MIR SINE MIR 14 262 0 486 266 95 18 chr5 117874626 117874795 -81755355 + ERVL LTR ERVL 2008 2189 -3575 2148 315 64 12 chr5 117874902 117876999 -81753151 + ERVL LTR ERVL 2134 4356 -1298 2645 256 52 6 chr5 117877287 117877963 -81752187 + L1ME3 LINE L1 5453 6159 -3 2596 47 0 0 chr5 117878313 117878611 -81751539 - AluY SINE Alu -13 298 1 250 135 0 0 chr5 117878837 117878874 -81751276 + AluSp SINE Alu 137 173 -130 913 105 24 0 chr5 117878915 117879039 -81751111 + FLAM_C SINE Alu 1 127 -16 6312 70 48 6 chr5 117879052 117880310 -81749840 + SVA Other Other 35 1384 -2 234 0 0 0 chr5 117880482 117880508 -81749642 + (TAA)n Simple_repeat Simple_repeat 2 27 0 906 173 13 0 chr5 117880513 117880669 -81749481 + AluJb SINE Alu 138 295 -17 818 194 0 41 chr5 117880870 117881040 -81749110 - FRAM SINE Alu -14 162 1 2211 115 0 0 chr5 117881053 117881349 -81748801 - AluSx SINE Alu -14 298 3 28 48 0 0 chr5 117881658 117881700 -81748450 + AT_rich Low_complexity Low_complexity 1 42 0 462 126 168 21 chr5 117882113 117882208 -81747942 + FLAM_C SINE Alu 30 138 -5 264 59 0 0 chr5 117882780 117882814 -81747336 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 2047 111 7 0 chr5 117882817 117883096 -81747054 - AluSx SINE Alu -31 281 1 400 280 10 10 chr5 117883792 117883892 -81746258 + L2 LINE L2 3173 3272 0 895 146 35 7 chr5 117883973 117884117 -81746033 - FAM SINE Alu -22 163 16 1646 215 73 3 chr5 117884248 117884630 -81745520 - L1MC3 LINE L1 0 7785 7377 183 80 0 0 chr5 117885066 117885091 -81745059 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 1159 273 146 16 chr5 117885092 117885543 -81744607 - LTR33 LTR ERVL -1 520 11 1698 172 0 40 chr5 117888800 117889096 -81741054 - AluJb SINE Alu -20 292 9 1546 103 0 95 chr5 117889400 117889653 -81740497 + AluSx SINE Alu 1 229 -83 200 174 28 156 chr5 117890674 117890720 -81739430 - L2 LINE L2 -97 3216 3190 726 216 0 0 chr5 117890720 117890836 -81739314 + FLAM_A SINE Alu 4 119 -14 200 174 28 156 chr5 117890836 117890898 -81739252 - L2 LINE L2 -123 3190 3122 2026 132 76 25 chr5 117890898 117891255 -81738895 - THE1C LTR MaLR 0 375 1 729 330 152 24 chr5 117891329 117891744 -81738406 - L2 LINE L2 -338 2976 2509 868 205 200 0 chr5 117892319 117892534 -81737616 - MIR SINE MIR -3 259 2 409 297 38 81 chr5 117893781 117893966 -81736184 + MER5B DNA MER1_type 1 177 -1 276 30 0 0 chr5 117894133 117894166 -81735984 + (CA)n Simple_repeat Simple_repeat 1 33 0 1106 155 42 68 chr5 117894183 117894448 -81735702 + L1MD1 LINE L1 984 1241 -5299 4657 169 47 42 chr5 117894799 117895731 -81734419 + L1MD1 LINE L1 5492 6436 -200 1676 187 0 35 chr5 117895731 117896041 -81734109 + AluJb SINE Alu 1 299 -13 4657 169 47 42 chr5 117896041 117896242 -81733908 + L1MD1 LINE L1 6436 6635 -1 312 250 83 0 chr5 117896930 117897026 -81733124 - L3b LINE CR1 -98 1485 1382 393 22 0 0 chr5 117899593 117899639 -81730511 + (CA)n Simple_repeat Simple_repeat 1 46 0 487 198 157 105 chr5 117899774 117900087 -81730063 - MER46C DNA MER2_type -9 329 1 271 216 122 14 chr5 117900209 117900283 -81729867 - MIR SINE MIR -82 126 45 367 278 9 9 chr5 117900315 117900430 -81729720 - LTR67 LTR ERVL -12 545 431 241 217 14 43 chr5 117900914 117900983 -81729167 + L1M4 LINE L1 3914 3980 -2166 250 350 92 6 chr5 117902011 117902371 -81727779 + L1M4 LINE L1 4233 4623 -1523 1617 197 69 3 chr5 117902740 117903090 -81727060 + L1MB8 LINE L1 5806 6178 0 404 187 32 8 chr5 117903491 117903614 -81726536 + GA-rich Low_complexity Low_complexity 4 129 0 290 269 113 31 chr5 117904059 117904219 -81725931 - LTR33 LTR ERVL 0 521 349 180 0 0 0 chr5 117904317 117904337 -81725813 + (A)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr5 117904784 117904805 -81725345 + AT_rich Low_complexity Low_complexity 1 21 0 2064 86 0 11 chr5 117906153 117906422 -81723728 + AluY SINE Alu 1 266 -45 301 265 117 37 chr5 117907191 117907353 -81722797 + MER5B DNA MER1_type 4 178 0 307 286 15 87 chr5 117908053 117908104 -81722046 - MIR SINE MIR -13 249 196 2626 153 43 39 chr5 117908104 117908612 -81721538 + LTR54 LTR ERV1 1 510 0 307 286 15 87 chr5 117908612 117908756 -81721394 - MIR SINE MIR -66 196 68 40076 76 5 11 chr5 117908878 117915066 -81715084 + L1PA6 LINE L1 1 6150 -4 1153 247 229 18 chr5 117915243 117915693 -81714457 - MLT1F1 LTR MaLR -12 555 11 1618 180 20 10 chr5 117915751 117916045 -81714105 - L1PB4 LINE L1 -3 6153 5857 513 260 81 12 chr5 117916548 117916721 -81713429 - MIR SINE MIR -70 192 8 298 296 11 0 chr5 117916722 117916810 -81713340 + L1ME LINE L1 5552 5640 -481 254 250 47 16 chr5 117916927 117916991 -81713159 - L3 LINE CR1 -3 1574 1509 2051 117 10 10 chr5 117917191 117917499 -81712651 - AluSx SINE Alu -4 308 1 494 274 200 36 chr5 117917938 117918328 -81711822 + L2 LINE L2 2817 3270 -2 2257 166 53 22 chr5 117918768 117918816 -81711334 - MSTA LTR MaLR 0 428 383 2041 149 43 30 chr5 117918816 117919186 -81710964 - THE1C LTR MaLR 0 375 1 2257 166 53 22 chr5 117919186 117919552 -81710598 - MSTA LTR MaLR -45 383 1 2070 114 225 6 chr5 117920842 117921193 -81708957 + MSTA LTR MaLR 1 428 0 399 100 67 0 chr5 117921317 117921377 -81708773 + U6 snRNA snRNA 1 64 -43 1644 155 42 7 chr5 117922292 117922576 -81707574 - AluJo SINE Alu -18 294 1 596 224 112 22 chr5 117923028 117923207 -81706943 - MIR SINE MIR -5 257 63 282 330 65 40 chr5 117923248 117923448 -81706702 - MIR SINE MIR -46 216 12 1130 227 148 45 chr5 117923802 117924277 -81705873 + MLT1F1 LTR MaLR 5 559 -8 618 258 182 5 chr5 117924284 117924482 -81705668 + MER46C DNA MER2_type 93 325 -13 279 318 0 0 chr5 117925644 117925729 -81704421 + MIR3 SINE MIR 114 198 -10 453 263 18 9 chr5 117926639 117926753 -81703397 - L2 LINE L2 -2 3311 3197 3787 174 80 64 chr5 117926855 117927385 -81702765 + L1MB8 LINE L1 4779 5299 -879 630 155 147 0 chr5 117927385 117927501 -81702649 + FLAM_C SINE Alu 1 133 0 3787 174 80 64 chr5 117927501 117928320 -81701830 + L1MB8 LINE L1 5299 6178 0 209 277 99 20 chr5 117928432 117928533 -81701617 - L2 LINE L2 0 3313 3205 266 317 69 21 chr5 117928606 117928751 -81701399 - MIR SINE MIR -95 167 16 485 265 191 39 chr5 117929440 117929901 -81700249 + MLT1L LTR MaLR 83 613 -2 439 246 126 42 chr5 117930300 117930491 -81699659 - MIR SINE MIR -2 260 54 360 331 89 60 chr5 117932346 117932615 -81697535 - L2 LINE L2 -109 3163 2887 483 271 118 35 chr5 117932804 117932948 -81697202 - MIR SINE MIR -94 168 13 755 236 25 0 chr5 117933177 117933338 -81696812 + MER20 DNA MER1_type 2 166 -53 276 169 153 0 chr5 117934084 117934143 -81696007 + L1MB8 LINE L1 6110 6177 -1 208 214 21 21 chr5 117940050 117940148 -81690002 + T-rich Low_complexity Low_complexity 2 145 0 1691 205 43 51 chr5 117940387 117940543 -81689607 - L1ME1 LINE L1 -5 6161 6005 2089 95 67 0 chr5 117940543 117940828 -81689322 - AluSg SINE Alu -6 304 1 1691 205 43 51 chr5 117940828 117941140 -81689010 - L1ME1 LINE L1 -161 6005 5697 849 195 16 11 chr5 117941145 117941330 -81688820 - MLT1A2 LTR MaLR 0 374 189 240 274 26 6 chr5 117941346 117941440 -81688710 + GA-rich Low_complexity Low_complexity 2 160 0 769 176 85 9 chr5 117941443 117941618 -81688532 - MLT1B LTR MaLR -194 180 3 1140 184 40 59 chr5 117941688 117941847 -81688303 + L1ME LINE L1 5352 5505 -661 2366 91 0 0 chr5 117941847 117942145 -81688005 - AluSg SINE Alu -12 298 1 1140 184 40 59 chr5 117942145 117942257 -81687893 + L1ME LINE L1 5505 5618 -548 921 168 31 0 chr5 117942831 117942992 -81687158 - MER5A DNA MER1_type -23 166 1 443 282 93 19 chr5 117943796 117944011 -81686139 - L1ME1 LINE L1 -403 5718 5492 869 188 0 0 chr5 117944154 117944298 -81685852 + AluSg/x SINE Alu 145 288 -22 18284 38 1 0 chr5 117944435 117947293 -81682857 - L1PA4 LINE L1 0 6155 3293 349 293 0 0 chr5 117947502 117947584 -81682566 + MIR3 SINE MIR 76 157 -51 2668 143 16 32 chr5 117947984 117948423 -81681727 - MSTB1 LTR MaLR 0 432 1 300 282 56 7 chr5 117948438 117948580 -81681570 + L1ME4a LINE L1 5970 6118 -3 562 318 178 4 chr5 117948848 117949112 -81681038 + L2 LINE L2 2963 3272 0 16599 94 21 5 chr5 117949591 117950864 -81679286 - Charlie3 DNA MER1_type 0 2706 1454 2398 131 46 14 chr5 117950864 117951215 -81678935 + THE1B LTR MaLR 3 364 0 16599 94 21 5 chr5 117951215 117952519 -81677631 - Charlie3 DNA MER1_type -1252 1454 46 596 213 37 24 chr5 117953053 117953217 -81676933 - MER104 DNA Tc2 0 180 15 655 221 226 20 chr5 117953711 117953906 -81676244 + MIR SINE MIR 2 236 -26 180 77 0 0 chr5 117953925 117953951 -81676199 + (ATG)n Simple_repeat Simple_repeat 1 26 0 213 247 315 0 chr5 117954357 117954446 -81675704 - L2 LINE L2 -10 3303 3187 30433 122 12 54 chr5 117954511 117960946 -81669204 + L1PA8 LINE L1 14 6171 -1 419 313 35 0 chr5 117961039 117961154 -81668996 + L2 LINE L2 3129 3247 -25 682 233 196 78 chr5 117961372 117961745 -81668405 + MLT1J LTR MaLR 61 477 -34 6401 56 34 17 chr5 117962491 117963258 -81666892 + LTR17 LTR ERV1 1 780 0 49254 52 13 1 chr5 117963258 117969204 -81660946 + HERV17 LTR ERV1 1 6017 -2609 2489 51 0 0 chr5 117969228 117969520 -81660630 + HERV17 LTR ERV1 8335 8626 0 6347 76 21 10 chr5 117969520 117970292 -81659858 + LTR17 LTR ERV1 1 780 0 216 296 0 0 chr5 117971505 117971559 -81658591 + CT-rich Low_complexity Low_complexity 3 56 0 2390 69 0 0 chr5 117972077 117972365 -81657785 - AluY SINE Alu -23 288 1 339 194 15 0 chr5 117972444 117972511 -81657639 + FLAM SINE Alu 66 133 0 449 264 48 0 chr5 117972859 117972984 -81657166 + MER20 DNA MER1_type 31 161 -58 34 89 0 0 chr5 117973152 117973242 -81656908 + AT_rich Low_complexity Low_complexity 1 90 0 3442 144 20 9 chr5 117973246 117973787 -81656363 - L1MC1 LINE L1 -6 6327 5781 21 57 0 0 chr5 117973873 117973908 -81656242 + AT_rich Low_complexity Low_complexity 1 35 0 2047 139 0 0 chr5 117974690 117974977 -81655173 + AluSx SINE Alu 1 287 -25 885 191 19 0 chr5 117975190 117975347 -81654803 + AluSg/x SINE Alu 137 296 -16 222 241 0 121 chr5 117975512 117975595 -81654555 + L2 LINE L2 3195 3267 -5 186 208 0 0 chr5 117975596 117975644 -81654506 + GA-rich Low_complexity Low_complexity 1 48 0 2395 242 42 50 chr5 117975722 117978119 -81652031 + L1MB5 LINE L1 66 2690 -3873 1123 237 8 8 chr5 117978127 117978389 -81651761 + L1MB5 LINE L1 5752 6013 -403 1978 178 13 36 chr5 117978466 117978516 -81651634 + L1MB5 LINE L1 6019 6069 -341 2241 112 0 0 chr5 117978516 117978812 -81651338 + AluSg1 SINE Alu 1 296 -13 1978 178 13 36 chr5 117978812 117979154 -81650996 + L1MB5 LINE L1 6069 6402 -8 43246 56 3 1 chr5 117979538 117985677 -81644473 - L1PA5 LINE L1 -2 6152 1 196 296 41 71 chr5 117985745 117985843 -81644307 + L2 LINE L2 441 535 -2779 1624 182 29 51 chr5 117986774 117987043 -81643107 + MER2 DNA MER2_type 1 262 -82 2221 129 3 0 chr5 117987043 117987354 -81642796 - AluSx SINE Alu 0 312 1 1624 182 29 51 chr5 117987354 117987435 -81642715 + MER2 DNA MER2_type 262 343 -1 549 55 0 27 chr5 117987684 117987757 -81642393 - L1PA5 LINE L1 -6 6148 6078 22 56 0 0 chr5 117987810 117987846 -81642304 + AT_rich Low_complexity Low_complexity 1 36 0 1657 151 41 163 chr5 117987899 117988383 -81641767 - MSTB LTR MaLR 0 426 2 216 283 125 8 chr5 117988426 117988546 -81641604 + MIR SINE MIR 128 261 -1 287 304 95 36 chr5 117988770 117988938 -81641212 - L2 LINE L2 -10 3262 3085 245 286 95 0 chr5 117989565 117989649 -81640501 - L2 LINE L2 -12 3301 3210 277 317 14 7 chr5 117990422 117990564 -81639586 - L1M LINE L1 -755 5407 5265 236 208 42 0 chr5 117990584 117990632 -81639518 - MIR SINE MIR 0 262 213 203 122 24 24 chr5 117990703 117990744 -81639406 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 222 37 0 0 chr5 117992044 117992071 -81638079 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 824 303 55 27 chr5 117992155 117992485 -81637665 - MER102b DNA MER1_type 0 341 3 306 0 0 0 chr5 117992775 117992809 -81637341 + (TG)n Simple_repeat Simple_repeat 2 35 0 317 271 135 0 chr5 117993012 117993108 -81637042 - MER91B DNA MER1_type -5 185 77 2283 108 0 13 chr5 117993472 117993786 -81636364 + AluSg SINE Alu 1 310 0 416 310 62 0 chr5 117994261 117994390 -81635760 - MLT1J LTR MaLR -283 228 92 1698 136 12 16 chr5 117995705 117995956 -81634194 + AluJo SINE Alu 33 282 -30 1431 156 3 89 chr5 117995972 117996287 -81633863 - AluJo SINE Alu -22 290 3 1810 130 33 30 chr5 117999593 117999892 -81630258 + AluSx SINE Alu 1 300 -12 4840 189 23 79 chr5 118000313 118000882 -81629268 - MER45B DNA AcHobo -541 1040 561 2251 120 0 0 chr5 118000882 118001181 -81628969 + AluSg SINE Alu 1 299 -11 4840 189 23 79 chr5 118001181 118001713 -81628437 - MER45B DNA AcHobo -1020 561 1 195 290 32 0 chr5 118001719 118001781 -81628369 - MIR SINE MIR -26 236 173 1303 278 111 2 chr5 118003057 118003525 -81626625 + LTR33 LTR ERVL 3 521 0 554 197 127 25 chr5 118003793 118003946 -81626204 - MIR SINE MIR -65 143 5 234 297 0 68 chr5 118005141 118005215 -81624935 - L2 LINE L2 -4 3309 3241 1288 199 37 8 chr5 118005378 118005619 -81624531 - AluJo SINE Alu -27 285 38 4241 195 64 60 chr5 118005624 118005655 -81624495 - L1MD1 LINE L1 0 6242 6213 1988 154 91 0 chr5 118005655 118005973 -81624177 - MER7A DNA MER2_type -1 345 1 4241 195 64 60 chr5 118005973 118006705 -81623445 - L1MD1 LINE L1 -29 6213 5485 1906 131 12 49 chr5 118006705 118007033 -81623117 - L1MC1 LINE L1 -2 6331 6016 808 129 24 8 chr5 118007033 118007150 -81623000 + L1MC1 LINE L1 6199 6324 -9 2136 125 0 3 chr5 118007151 118007448 -81622702 + AluSx SINE Alu 1 296 -16 4241 195 64 60 chr5 118007448 118008509 -81621641 - L1MD1 LINE L1 -756 5486 4343 443 313 132 0 chr5 118008512 118008694 -81621456 - L1MDa LINE L1 -5891 649 444 252 342 9 18 chr5 118008695 118008809 -81621341 - MIR SINE MIR -149 113 1 2250 106 0 7 chr5 118008992 118009293 -81620857 - AluSq SINE Alu -14 299 1 349 138 0 17 chr5 118009346 118009404 -81620746 - MLT2B1 LTR ERVL 0 520 464 1846 205 56 16 chr5 118009571 118010015 -81620135 + MLT1C LTR MaLR 6 467 0 239 352 0 0 chr5 118010480 118010551 -81619599 + L2 LINE L2 3242 3312 -1 266 347 32 0 chr5 118010664 118010759 -81619391 - MIR3 SINE MIR 0 208 111 1951 153 0 0 chr5 118013376 118013658 -81616492 - AluSx SINE Alu -30 282 1 286 274 141 44 chr5 118014805 118015011 -81615139 - MLT1L LTR MaLR -45 466 287 1106 323 55 9 chr5 118015035 118015475 -81614675 + L1MEc LINE L1 70 529 -5867 1126 225 48 63 chr5 118015542 118015743 -81614407 + L1MEc LINE L1 2405 2600 -3615 2293 92 0 7 chr5 118015743 118016047 -81614103 + AluSq SINE Alu 1 302 -11 1126 225 48 63 chr5 118016047 118016196 -81613954 + L1MEc LINE L1 2600 2750 -3465 21 71 0 0 chr5 118016631 118016673 -81613477 + AT_rich Low_complexity Low_complexity 1 42 0 252 0 0 0 chr5 118016742 118016770 -81613380 + (A)n Simple_repeat Simple_repeat 1 28 0 229 184 41 0 chr5 118016846 118016895 -81613255 + CT-rich Low_complexity Low_complexity 1 51 0 380 295 54 36 chr5 118016895 118017119 -81613031 + MLT1L LTR MaLR 37 264 -351 526 239 14 7 chr5 118017197 118017335 -81612815 - L1M4 LINE L1 -3284 2862 2724 49 66 0 0 chr5 118017771 118017862 -81612288 + AT_rich Low_complexity Low_complexity 1 91 0 1716 195 0 6 chr5 118017905 118018218 -81611932 + AluJo SINE Alu 1 311 -1 460 209 6 108 chr5 118018888 118018926 -81611224 - L1MA10 LINE L1 -2 6332 6295 2096 232 70 21 chr5 118018926 118019550 -81610600 - L1ME2 LINE L1 -18 6146 5492 926 226 65 65 chr5 118019559 118019820 -81610330 - MLT1D LTR MaLR 0 505 207 1362 181 27 9 chr5 118019863 118020223 -81609927 + MER61B LTR ERV1 1 396 -29 304 145 30 206 chr5 118020270 118020401 -81609749 - MLT1D LTR MaLR -397 108 1 1196 173 17 6 chr5 118020401 118020730 -81609420 - L1ME2 LINE L1 -755 5391 5153 301 340 70 0 chr5 118020758 118020858 -81609292 + L2 LINE L2 3150 3256 -16 1819 182 51 11 chr5 118020981 118021354 -81608796 - L1MB7 LINE L1 -16 6168 5781 1812 146 10 23 chr5 118021354 118021575 -81608575 - Tigger3(Golem) DNA MER2_type -1 3028 2811 2624 124 55 18 chr5 118021575 118022009 -81608141 + LTR7 LTR ERV1 1 450 0 1812 146 10 23 chr5 118022009 118022089 -81608061 - Tigger3(Golem) DNA MER2_type -218 2811 2731 31099 114 28 55 chr5 118022101 118028423 -81601727 + L1PA8 LINE L1 12 6149 -23 4148 135 65 10 chr5 118028423 118029149 -81601001 - Tigger3(Golem) DNA MER2_type -252 2777 2012 1221 209 8 12 chr5 118029150 118029403 -81600747 - AluJb SINE Alu -60 252 1 328 137 0 0 chr5 118029419 118029470 -81600680 - Tigger3(Golem) DNA MER2_type -1058 1971 1921 * 526 226 10 0 chr5 118029468 118029570 -81600580 - Tigger3(Golem) DNA MER2_type -2925 104 2 2442 163 10 0 chr5 118029571 118029982 -81600168 - L1MB7 LINE L1 -401 5783 5369 * 5002 201 38 62 chr5 118029981 118030028 -81600122 - L1M4 LINE L1 -5353 1189 1142 3135 146 99 10 chr5 118030028 118030611 -81599539 + LTR24C LTR ERV1 1 635 0 5002 201 38 62 chr5 118030611 118031778 -81598372 - L1M4 LINE L1 -5400 1142 4 209 264 19 0 chr5 118031851 118031904 -81598246 + L2 LINE L2 2989 3042 -230 1943 232 41 68 chr5 118032680 118033309 -81596841 - LTR9 LTR ERV1 0 612 1 441 241 126 10 chr5 118033698 118033902 -81596248 - L1M4 LINE L1 -620 5554 5323 2459 150 0 72 chr5 118033903 118034088 -81596062 - L1PB1 LINE L1 -3 6864 6667 2516 75 0 0 chr5 118034088 118034395 -81595755 - AluY SINE Alu -4 307 1 2459 150 0 72 chr5 118034395 118034683 -81595467 - L1PB1 LINE L1 -200 6667 6425 759 65 0 0 chr5 118034699 118034792 -81595358 + AluY SINE Alu 212 304 -7 370 179 0 0 chr5 118034792 118034870 -81595280 + L1PB1 LINE L1 5964 6041 -110 * 14767 205 59 20 chr5 118034860 118035296 -81594854 - L1PB1 LINE L1 -438 6429 6012 10451 50 5 0 chr5 118035296 118037278 -81592872 - L1PA5 LINE L1 -11 6143 4145 14767 205 59 20 chr5 118037278 118042697 -81587453 - L1PB1 LINE L1 -855 6012 254 1497 219 61 45 chr5 118042697 118043139 -81587011 + LTR2 LTR ERV1 1 449 0 45152 196 3 7 chr5 118043139 118050986 -81579164 + HERVE LTR ERV1 1 7812 -1 1665 196 116 31 chr5 118051005 118051428 -81578722 + LTR2B LTR ERV1 32 490 0 704 244 53 29 chr5 118051428 118051674 -81578476 - L1PB1 LINE L1 -6606 257 6 509 197 36 7 chr5 118051841 118051978 -81578172 - L1MD3 LINE L1 0 7995 7855 24 0 0 0 chr5 118052714 118052738 -81577412 + AT_rich Low_complexity Low_complexity 1 24 0 976 99 80 0 chr5 118053171 118053322 -81576828 + MLT2A2 LTR ERVL 1 163 -290 250 0 100 0 chr5 118053979 118054019 -81576131 + T-rich Low_complexity Low_complexity 3 46 0 350 239 0 54 chr5 118054584 118054676 -81575474 + L2 LINE L2 3186 3272 0 768 276 38 38 chr5 118055189 118055504 -81574646 - MER102a DNA MER1_type -15 315 1 252 159 45 0 chr5 118056481 118056525 -81573625 + L2 LINE L2 3258 3303 -10 654 228 189 5 chr5 118056707 118056913 -81573237 + MIR SINE MIR 15 258 -4 521 265 43 0 chr5 118057135 118057252 -81572898 + MIR SINE MIR 30 151 -111 497 215 8 33 chr5 118057265 118057386 -81572764 + ORSL DNA AcHobo 1 118 -157 264 145 72 3 chr5 118057397 118057455 -81572695 + MSTA LTR MaLR 1 69 -373 29111 110 9 21 chr5 118057456 118063891 -81566259 + L1PA7 LINE L1 20 6465 -4 506 198 0 10 chr5 118063915 118064011 -81566139 + MSTA LTR MaLR 42 136 -292 1103 215 5 0 chr5 118064011 118064216 -81565934 - AluJo SINE Alu -63 249 44 470 238 86 46 chr5 118065081 118065232 -81564918 - MIR3 SINE MIR -21 187 31 21 0 0 0 chr5 118065424 118065445 -81564705 + AT_rich Low_complexity Low_complexity 1 21 0 1805 273 28 22 chr5 118066292 118066781 -81563369 + ERVL LTR ERVL 4586 5081 -683 5342 142 12 33 chr5 118066781 118067724 -81562426 + MER49 LTR ERV1 1 923 0 1805 273 28 22 chr5 118067724 118067878 -81562272 + ERVL LTR ERVL 5081 5233 -531 754 233 149 53 chr5 118067948 118068343 -81561807 + LTR50 LTR ERVL 350 782 -13 498 272 36 53 chr5 118068346 118068525 -81561625 - MIR SINE MIR -65 143 1 424 246 0 69 chr5 118069127 118069257 -81560893 + L2 LINE L2 3193 3313 0 325 320 206 0 chr5 118069258 118069433 -81560717 + L3 LINE CR1 1365 1575 -2 359 203 278 21 chr5 118071272 118071459 -81558691 + L2 LINE L2 2137 2371 -943 251 349 64 38 chr5 118071466 118071701 -81558449 + L2 LINE L2 2736 2976 -338 1126 77 117 5 chr5 118071751 118071947 -81558203 + MER21A LTR ERV1 1 218 -713 648 261 12 6 chr5 118072026 118072187 -81557963 + MER21B LTR ERV1 279 440 -423 487 202 19 10 chr5 118072196 118072300 -81557850 + MER21A LTR ERV1 579 683 -248 291 308 142 0 chr5 118072448 118072568 -81557582 + L2 LINE L2 3136 3272 0 219 203 0 0 chr5 118073413 118073472 -81556678 + (TA)n Simple_repeat Simple_repeat 1 59 0 896 125 33 7 chr5 118073555 118073707 -81556443 - L1PA13 LINE L1 0 6163 6008 392 327 56 92 chr5 118074858 118075365 -81554785 - L2 LINE L2 -191 3081 2605 420 240 10 0 chr5 118075432 118075532 -81554618 - MER94 DNA DNA -33 101 1 307 267 69 26 chr5 118075543 118075659 -81554491 - L2 LINE L2 -789 2525 2405 1244 261 57 59 chr5 118075681 118076209 -81553941 + Charlie2 DNA MER1_type 28 554 -2308 1302 231 94 24 chr5 118076342 118076801 -81553349 + Charlie2a DNA MER1_type 1474 1964 -898 417 195 0 0 chr5 118076869 118076951 -81553199 + Charlie2a DNA MER1_type 2207 2288 -574 5675 141 22 30 chr5 118076952 118078618 -81551532 - L1PB1 LINE L1 -4 6863 5217 6501 149 59 39 chr5 118078618 118079871 -81550279 - L1PB1 LINE L1 -2088 4774 3548 807 98 89 0 chr5 118079871 118079983 -81550167 + AluSq/x SINE Alu 1 122 -190 6501 149 59 39 chr5 118079983 118081873 -81548277 - L1PB1 LINE L1 -3314 3548 1392 817 209 15 10 chr5 118081870 118082066 -81548084 - L1PB1 LINE L1 -6666 197 1 * 823 253 142 10 chr5 118082074 118082553 -81547597 + Charlie2a DNA MER1_type 2278 2819 -43 879 168 0 0 chr5 118082562 118082693 -81547457 + FLAM_C SINE Alu 1 131 -2 334 262 36 0 chr5 118082725 118082809 -81547341 - L2 LINE L2 -923 2391 2305 667 309 40 5 chr5 118082845 118083046 -81547104 - MIR SINE MIR -38 224 17 546 306 87 57 chr5 118083910 118084368 -81545782 - L2 LINE L2 -1130 2184 1713 223 330 144 0 chr5 118085305 118085402 -81544748 - MIR SINE MIR -64 144 34 377 291 61 27 chr5 118085558 118085706 -81544444 + MIR SINE MIR 2 154 -108 276 311 104 25 chr5 118089106 118089477 -81540673 - L1MC/D LINE L1 -719 5432 5349 260 286 87 15 chr5 118089482 118089678 -81540472 - L1MC/D LINE L1 -1060 5086 4877 1725 235 79 12 chr5 118090085 118090655 -81539495 + MLT1E2 LTR MaLR 19 626 0 284 303 45 0 chr5 118090847 118090979 -81539171 - L1MC/D LINE L1 -1980 4166 4029 975 139 86 0 chr5 118091488 118091639 -81538511 - AluJb SINE Alu -14 298 135 301 141 0 62 chr5 118092122 118092186 -81537964 + AluS SINE Alu 222 281 -20 2258 79 3 3 chr5 118093788 118094078 -81536072 + AluSg SINE Alu 5 294 -16 2411 73 16 0 chr5 118094328 118094631 -81535519 - AluY SINE Alu -3 308 1 948 124 0 139 chr5 118094859 118095061 -81535089 + AluSq SINE Alu 1 174 -139 490 90 15 0 chr5 118095061 118095128 -81535022 + AluY SINE Alu 63 130 -181 790 296 92 24 chr5 118095493 118095983 -81534167 - L2 LINE L2 -50 3263 2741 2003 110 10 32 chr5 118198690 118198999 -81431151 + AluSx SINE Alu 1 302 -10 504 0 0 0 chr5 118205023 118205079 -81425071 + (GA)n Simple_repeat Simple_repeat 1 56 0 313 269 280 21 chr5 118205564 118205757 -81424393 - MIR SINE MIR -3 259 17 225 0 0 0 chr5 118206352 118206377 -81423773 + (TG)n Simple_repeat Simple_repeat 2 26 0 2323 99 0 0 chr5 118206393 118206706 -81423444 + AluSq SINE Alu 1 313 0 298 267 44 22 chr5 118206777 118206867 -81423283 + L2 LINE L2 3218 3309 -4 382 232 14 99 chr5 118207346 118207488 -81422662 - L2 LINE L2 -2 3311 3182 1265 182 24 34 chr5 118207592 118207889 -81422261 - AluJo SINE Alu -18 294 1 701 145 8 23 chr5 118207979 118208110 -81422040 - FLAM_C SINE Alu -2 131 3 255 185 0 62 chr5 118208112 118208177 -81421973 - MIR SINE MIR -120 142 82 2334 30 0 0 chr5 118208436 118208497 -81421653 - L1PA4 LINE L1 -83 6072 6012 311 328 37 45 chr5 118208497 118208741 -81421409 - L1MB1 LINE L1 -188 6001 5760 2030 130 0 0 chr5 118208756 118209057 -81421093 + AluSx SINE Alu 1 301 -11 2165 85 0 23 chr5 118209059 118209366 -81420784 + AluY SINE Alu 1 300 -11 841 188 0 24 chr5 118209366 118209531 -81420619 + AluSp SINE Alu 134 294 -19 405 241 8 68 chr5 118209533 118209666 -81420484 - AluJo/FLAM SINE Alu -177 125 1 1140 152 0 0 chr5 118209882 118210066 -81420084 + AluSg/x SINE Alu 117 300 -12 850 122 0 0 chr5 118210086 118210209 -81419941 + FLAM_C SINE Alu 12 134 -9 1029 145 0 0 chr5 118210518 118210677 -81419473 - AluSg/x SINE Alu -20 292 134 2042 101 28 0 chr5 118210677 118210965 -81419185 - AluSq SINE Alu -7 306 11 210 191 0 0 chr5 118212081 118212128 -81418022 + GA-rich Low_complexity Low_complexity 4 50 0 453 76 0 0 chr5 118212554 118212620 -81417530 + (TC)n Simple_repeat Simple_repeat 1 66 0 206 280 0 0 chr5 118212678 118212728 -81417422 + GA-rich Low_complexity Low_complexity 1 50 0 270 160 0 0 chr5 118212814 118212864 -81417286 + CT-rich Low_complexity Low_complexity 3 52 0 180 111 0 0 chr5 118214325 118214352 -81415798 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 1222 136 28 19 chr5 118215636 118215850 -81414300 + AluJb SINE Alu 87 302 -10 1880 121 0 4 chr5 118218019 118218292 -81411858 + AluSx SINE Alu 28 299 -13 2409 43 0 16 chr5 118218292 118218596 -81411554 + AluY SINE Alu 1 299 -12 408 176 106 0 chr5 118218597 118218682 -81411468 + L1MB2 LINE L1 5967 6060 -111 1515 192 43 0 chr5 118218683 118218959 -81411191 + AluJo SINE Alu 1 288 -14 684 287 22 0 chr5 118219073 118219254 -81410896 - MIR SINE MIR -55 207 23 2221 87 0 3 chr5 118219256 118219554 -81410596 - AluSx SINE Alu -15 297 1 2261 65 0 23 chr5 118219566 118219872 -81410278 - AluSg SINE Alu -1 309 11 2360 67 0 0 chr5 118219884 118220181 -81409969 - AluY SINE Alu -14 297 1 380 58 0 39 chr5 118220181 118220233 -81409917 - AluSq/x SINE Alu -168 135 86 1000 134 89 55 chr5 118220233 118220435 -81409715 - AluJo SINE Alu -92 220 12 1180 167 30 17 chr5 118220535 118220768 -81409382 - AluJb SINE Alu -74 238 3 1094 187 75 4 chr5 118220834 118221075 -81409075 - AluJb SINE Alu -12 300 43 2941 158 69 85 chr5 118221122 118221253 -81408897 + LTR8A LTR ERV1 1 133 -594 1673 118 6 81 chr5 118221253 118221575 -81408575 - AluSx SINE Alu -14 298 1 2941 158 69 85 chr5 118221575 118221749 -81408401 + LTR8A LTR ERV1 133 308 -419 1785 131 10 13 chr5 118221749 118222047 -81408103 + AluSx SINE Alu 1 297 -15 2941 158 69 85 chr5 118222047 118222479 -81407671 + LTR8A LTR ERV1 308 727 0 362 67 0 0 chr5 118223121 118223166 -81406984 - LTR7 LTR ERV1 0 450 406 401 267 9 9 chr5 118223473 118223578 -81406572 - MER96 DNA MER1_type? -2 173 69 1631 174 0 14 chr5 118224045 118224339 -81405811 - AluSx SINE Alu -18 294 5 1507 178 13 13 chr5 118224424 118224727 -81405423 + AluJo SINE Alu 3 305 -7 224 157 0 20 chr5 118224870 118224921 -81405229 + (TTA)n Simple_repeat Simple_repeat 1 50 0 33 25 0 0 chr5 118225783 118225823 -81404327 + AT_rich Low_complexity Low_complexity 1 40 0 266 242 53 32 chr5 118226033 118226128 -81404022 + MARNA DNA Mariner 241 337 -249 932 170 35 6 chr5 118226162 118226333 -81403817 + AluJo SINE Alu 109 284 -28 522 0 0 0 chr5 118226333 118226391 -81403759 + (TA)n Simple_repeat Simple_repeat 2 59 0 21 36 0 0 chr5 118226391 118226419 -81403731 + AT_rich Low_complexity Low_complexity 1 28 0 1157 229 100 104 chr5 118226885 118227526 -81402624 - HAL1 LINE L1 -565 1942 1305 308 242 286 0 chr5 118227576 118227667 -81402483 + FLAM_A SINE Alu 1 117 -16 369 343 89 37 chr5 118228184 118228511 -81401639 + HAL1 LINE L1 812 1155 -1352 437 298 126 11 chr5 118228533 118228795 -81401355 + HAL1 LINE L1 1609 1900 -607 1909 111 24 7 chr5 118229022 118229319 -81400831 + AluSq SINE Alu 1 302 -11 1387 164 93 43 chr5 118229781 118230061 -81400089 + AluJo SINE Alu 1 294 -8 487 254 145 78 chr5 118230061 118230419 -81399731 + HAL1 LINE L1 2126 2507 0 393 305 75 28 chr5 118232603 118232816 -81397334 + MIR SINE MIR 20 242 -20 2207 94 0 0 chr5 118232818 118233125 -81397025 + AluSg1 SINE Alu 1 307 -2 1167 227 133 60 chr5 118235375 118235878 -81394272 - HAL1 LINE L1 -1319 1188 649 1908 223 61 7 chr5 118235968 118236377 -81393773 - LTR16C LTR ERVL -1 490 60 2364 134 110 10 chr5 118236911 118237321 -81392829 + LTR32 LTR ERVL 8 458 -13 1347 162 88 22 chr5 118237509 118237781 -81392369 - AluJo SINE Alu -22 290 1 2146 93 0 0 chr5 118238077 118238367 -81391783 + AluY SINE Alu 20 309 -2 181 222 86 25 chr5 118238489 118238570 -81391580 + L2 LINE L2 1639 1724 -1590 2772 86 8 3 chr5 118238595 118238957 -81391193 - THE1B LTR MaLR 0 364 1 664 289 177 25 chr5 118238958 118239280 -81390870 + MLT1J2 LTR MaLR 24 394 -56 4556 159 47 90 chr5 118239396 118240168 -81389982 + MER45B DNA AcHobo 1 805 -776 2236 110 3 0 chr5 118240168 118240476 -81389674 + AluSc SINE Alu 1 309 0 4556 159 47 90 chr5 118240476 118240683 -81389467 + MER45B DNA AcHobo 805 931 -650 401 226 137 0 chr5 118240683 118240785 -81389365 - FLAM_C SINE Alu -16 117 2 4556 159 47 90 chr5 118240785 118240891 -81389259 + MER45B DNA AcHobo 931 1040 0 2199 211 120 58 chr5 118241331 118241725 -81388425 - MER76 LTR ERV -23 665 297 1821 158 0 7 chr5 118241725 118242028 -81388122 + AluJb SINE Alu 1 301 -11 2199 211 120 58 chr5 118242028 118242101 -81388049 - MER76 LTR ERV -391 297 230 1920 161 45 9 chr5 118242101 118242437 -81387713 - MER7A DNA MER2_type 0 346 1 2199 211 120 58 chr5 118242437 118242594 -81387556 - MER76 LTR ERV -458 230 1 982 279 7 17 chr5 118242683 118242981 -81387169 + L2 LINE L2 2402 2696 -618 1147 208 0 56 chr5 118242982 118243266 -81386884 + AluJo SINE Alu 1 268 -44 1630 171 6 40 chr5 118243276 118243459 -81386691 - AluJo SINE Alu -1 311 142 1836 133 0 69 chr5 118243459 118243791 -81386359 - AluSq SINE Alu 0 313 5 1630 171 6 40 chr5 118243791 118243929 -81386221 - AluJo SINE Alu -170 142 1 386 208 240 0 chr5 118243961 118244057 -81386093 + FLAM_A SINE Alu 4 122 -11 498 322 156 24 chr5 118244088 118244418 -81385732 + L2 LINE L2 2705 2990 -323 1679 138 33 11 chr5 118244418 118244724 -81385426 + AluSx SINE Alu 1 312 0 498 322 156 24 chr5 118244724 118244928 -81385222 + L2 LINE L2 2990 3313 0 1448 191 14 3 chr5 118245041 118245329 -81384821 + AluJo SINE Alu 1 291 -21 220 219 44 26 chr5 118245462 118245576 -81384574 + (TA)n Simple_repeat Simple_repeat 1 116 0 2214 100 0 0 chr5 118245748 118246047 -81384103 + AluSg SINE Alu 1 299 -11 2112 126 7 0 chr5 118246300 118246609 -81383541 - AluSx SINE Alu -1 311 1 2012 164 28 90 chr5 118247222 118247288 -81382862 - MLT1D LTR MaLR -3 502 433 2021 124 7 3 chr5 118247288 118247586 -81382564 + AluSx SINE Alu 1 299 -13 2012 164 28 90 chr5 118247586 118248054 -81382096 - MLT1D LTR MaLR -72 433 1 330 239 60 8 chr5 118248238 118248355 -81381795 + L1MC5 LINE L1 7732 7854 -107 246 194 0 148 chr5 118248576 118248647 -81381503 + FRAM SINE Alu 75 126 -176 2113 102 0 26 chr5 118248647 118248952 -81381198 - AluSx SINE Alu -15 297 1 246 194 0 148 chr5 118248952 118248988 -81381162 + FRAM SINE Alu 126 166 0 655 146 139 0 chr5 118249039 118249176 -81380974 + FAM SINE Alu 11 166 -19 871 154 53 75 chr5 118249190 118249417 -81380733 - L1MD1 LINE L1 0 6242 6021 303 293 40 47 chr5 118249852 118250002 -81380148 + MLT1J LTR MaLR 100 248 -263 550 239 56 56 chr5 118250035 118250215 -81379935 + MLT1J LTR MaLR 332 511 0 1879 136 31 0 chr5 118250979 118251273 -81378877 + AluSx SINE Alu 1 303 -9 1549 81 0 19 chr5 118251277 118251516 -81378634 + AluSg/x SINE Alu 74 308 0 440 118 29 0 chr5 118251545 118251613 -81378537 + AluS SINE Alu 229 298 -11 648 257 23 37 chr5 118251620 118251834 -81378316 + MLT1K LTR MaLR 226 436 -152 487 206 17 109 chr5 118251884 118252059 -81378091 + MLT1K LTR MaLR 430 588 0 629 82 0 0 chr5 118253186 118253271 -81376879 - AluY SINE Alu -14 297 213 448 304 59 69 chr5 118253947 118254292 -81375858 - L1MC4a LINE L1 -1867 5941 5599 1942 154 0 0 chr5 118254292 118254603 -81375547 + AluSx SINE Alu 1 311 -1 448 304 59 69 chr5 118254603 118254648 -81375502 - L1MC4a LINE L1 -2209 5599 5555 462 221 49 8 chr5 118254813 118254935 -81375215 + LTR68 LTR ERV1 8 134 -606 273 338 23 23 chr5 118255028 118255247 -81374903 - HAL1b LINE L1 -821 527 309 207 236 0 18 chr5 118255261 118255316 -81374834 + (TTA)n Simple_repeat Simple_repeat 2 55 0 10771 24 3 156 chr5 118255292 118256909 -81373241 - SVA Other Other -9 1377 8 1691 188 0 3 chr5 118256951 118257254 -81372896 + AluJb SINE Alu 1 302 0 399 184 0 0 chr5 118257751 118257827 -81372323 - MLT1F LTR MaLR 0 542 467 1939 198 50 45 chr5 118258003 118258323 -81371827 - L1MC4 LINE L1 -1 8041 7715 2252 116 0 0 chr5 118258323 118258615 -81371535 - AluSc SINE Alu -17 292 1 1939 198 50 45 chr5 118258615 118258809 -81371341 - L1MC4 LINE L1 -327 7715 7524 592 97 45 28 chr5 118258852 118259028 -81371122 + (TA)n Simple_repeat Simple_repeat 2 180 0 531 252 216 42 chr5 118259063 118259396 -81370754 - MLT1I LTR MaLR -1 408 18 1870 165 3 19 chr5 118259399 118259714 -81370436 + AluJb SINE Alu 3 312 0 1905 131 49 26 chr5 118259770 118260075 -81370075 + AluSx SINE Alu 1 312 0 2385 75 0 0 chr5 118260083 118260376 -81369774 + AluY SINE Alu 1 293 -18 313 280 148 11 chr5 118260382 118260564 -81369586 - L1ME LINE L1 -330 5791 5585 946 104 0 22 chr5 118260566 118260701 -81369449 + FLAM_C SINE Alu 1 132 -1 1731 130 59 0 chr5 118261410 118261649 -81368501 - AluJo SINE Alu -59 253 1 2252 123 0 0 chr5 118261947 118262249 -81367901 - AluSx SINE Alu -10 302 1 38 39 0 0 chr5 118262610 118262662 -81367488 + AT_rich Low_complexity Low_complexity 1 52 0 751 284 68 17 chr5 118262725 118263088 -81367062 - L1MC4a LINE L1 -394 5768 5499 7629 139 43 48 chr5 118263419 118263812 -81366338 - L1MA2 LINE L1 -1 7722 7328 2104 119 7 0 chr5 118263812 118264090 -81366060 - AluSx SINE Alu -32 280 1 7629 139 43 48 chr5 118264090 118264200 -81365950 - L1MA2 LINE L1 -395 7328 7219 249 186 136 0 chr5 118264200 118264259 -81365891 - MER67C LTR ERV1 -145 565 499 7629 139 43 48 chr5 118264259 118266118 -81364032 - L1MA2 LINE L1 -504 7219 5312 976 124 0 0 chr5 118266118 118266247 -81363903 + AluSq/x SINE Alu 1 129 -183 2040 134 0 0 chr5 118266254 118266569 -81363581 + AluSx SINE Alu 1 315 0 2124 63 4 0 chr5 118266581 118266836 -81363314 + AluY SINE Alu 1 256 -55 186 0 88 0 chr5 118266842 118266876 -81363274 + A-rich Low_complexity Low_complexity 1 37 0 1500 127 13 9 chr5 118266877 118267106 -81363044 - L1MA2 LINE L1 -6332 1233 1004 1929 181 0 0 chr5 118267120 118267430 -81362720 - AluJb SINE Alu -2 310 1 2130 114 0 0 chr5 118267499 118267779 -81362371 + AluSx SINE Alu 12 291 -21 2175 121 3 7 chr5 118268330 118268636 -81361514 - AluSq SINE Alu -8 305 1 740 211 130 57 chr5 118268929 118269260 -81360890 + L1MC5 LINE L1 7174 7528 -433 273 218 158 0 chr5 118269446 118269547 -81360603 - L2 LINE L2 -64 3249 3133 221 266 8 28 chr5 118269686 118269776 -81360374 + GA-rich Low_complexity Low_complexity 1 88 0 2086 137 0 0 chr5 118270785 118271063 -81359087 + AluJb SINE Alu 1 278 -34 2139 77 0 0 chr5 118271196 118271457 -81358693 - AluY SINE Alu -8 303 43 22 0 0 0 chr5 118271459 118271481 -81358669 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 118271519 118271540 -81358610 + AT_rich Low_complexity Low_complexity 1 21 0 385 43 0 0 chr5 118271576 118271623 -81358527 + AluY SINE Alu 1 47 -255 1260 119 5 0 chr5 118271625 118271810 -81358340 + AluSg/x SINE Alu 116 301 -8 204 40 0 0 chr5 118271839 118271864 -81358286 + (TG)n Simple_repeat Simple_repeat 1 25 0 326 97 3 3 chr5 118271880 118271935 -81358215 + Alu SINE Alu 2 47 -255 1340 90 0 0 chr5 118271936 118272102 -81358048 + AluSg/x SINE Alu 116 281 -28 2224 91 18 0 chr5 118272209 118272495 -81357655 + AluSp SINE Alu 1 291 -22 1323 158 0 9 chr5 118272518 118272733 -81357417 - AluJb SINE Alu -13 299 87 2912 16 0 6 chr5 118272892 118273212 -81356938 - AluYb8 SINE Alu 0 318 1 302 169 56 0 chr5 118273317 118273388 -81356762 - L1MC/D LINE L1 -2065 5743 5669 984 185 72 148 chr5 118273751 118274086 -81356064 - MLT1A2 LTR MaLR 0 374 74 2445 82 3 13 chr5 118274086 118274401 -81355749 - AluSp SINE Alu -1 312 1 984 185 72 148 chr5 118274401 118274470 -81355680 - MLT1A2 LTR MaLR -300 74 1 2067 128 0 20 chr5 118274807 118275111 -81355039 + AluSx SINE Alu 1 298 -14 1667 170 57 0 chr5 118275197 118275479 -81354671 + AluSx SINE Alu 1 298 -14 206 350 0 0 chr5 118275489 118275549 -81354601 + L2 LINE L2 3213 3272 0 2183 120 0 3 chr5 118275811 118276103 -81354047 + AluSg SINE Alu 1 291 -19 2442 139 11 8 chr5 118276648 118277022 -81353128 + THE1C LTR MaLR 1 375 0 292 235 128 10 chr5 118277671 118277764 -81352386 + L2 LINE L2 3197 3304 -9 279 0 0 0 chr5 118277764 118277795 -81352355 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 2074 137 3 3 chr5 118278630 118278930 -81351220 + AluSx SINE Alu 1 300 -12 278 122 0 0 chr5 118278973 118279014 -81351136 - U2 snRNA snRNA -147 41 1 568 231 111 10 chr5 118280011 118280210 -81349940 - MIR SINE MIR -38 224 6 1409 167 51 126 chr5 118280325 118280465 -81349685 + MLT1D LTR MaLR 1 150 -355 2389 87 0 26 chr5 118280465 118280774 -81349376 + AluSg SINE Alu 1 301 -9 1409 167 51 126 chr5 118280774 118281179 -81348971 + MLT1D LTR MaLR 150 505 0 1203 193 167 7 chr5 118281198 118281467 -81348683 - AluJb SINE Alu 0 312 1 2332 88 0 3 chr5 118281820 118282125 -81348025 - AluY SINE Alu -6 305 2 1978 102 0 33 chr5 118282912 118283187 -81346963 + AluY SINE Alu 1 266 -45 2077 155 0 0 chr5 118283502 118283812 -81346338 + AluJb SINE Alu 1 310 -2 869 257 29 21 chr5 118283849 118284090 -81346060 - MIR SINE MIR -18 244 2 830 232 0 12 chr5 118284191 118284359 -81345791 + FRAM SINE Alu 1 166 0 25 0 0 0 chr5 118284511 118284536 -81345614 + AT_rich Low_complexity Low_complexity 1 25 0 1916 163 10 3 chr5 118284550 118284856 -81345294 + AluJb SINE Alu 1 308 -4 2126 113 10 3 chr5 118284864 118285155 -81344995 + AluSx SINE Alu 6 298 -14 1859 147 9 129 chr5 118285282 118285348 -81344802 - MLT1B LTR MaLR 0 390 318 1857 184 0 0 chr5 118285348 118285653 -81344497 + AluSx SINE Alu 1 305 -7 1859 147 9 129 chr5 118285653 118285846 -81344304 - MLT1B LTR MaLR -72 318 203 2310 90 3 0 chr5 118285846 118286136 -81344014 - AluY SINE Alu -20 291 1 1859 147 9 129 chr5 118286136 118286318 -81343832 - MLT1B LTR MaLR -187 203 1 401 256 146 18 chr5 118286340 118286504 -81343646 + MIR SINE MIR 46 230 -32 799 269 144 55 chr5 118286525 118286693 -81343457 - L2 LINE L2 0 3313 3161 1701 147 39 14 chr5 118286693 118286978 -81343172 + AluJb SINE Alu 9 300 -12 799 269 144 55 chr5 118286978 118287141 -81343009 - L2 LINE L2 -152 3161 3014 868 181 8 129 chr5 118287141 118287389 -81342761 - MER20 DNA MER1_type -1 218 1 799 269 144 55 chr5 118287389 118287658 -81342492 - L2 LINE L2 -299 3014 2637 33 43 0 0 chr5 118288732 118288779 -81341371 + GC_rich Low_complexity Low_complexity 1 47 0 21 57 0 0 chr5 118289329 118289364 -81340786 + GC_rich Low_complexity Low_complexity 1 35 0 2116 158 5 42 chr5 118291246 118291512 -81338638 - MLT1A1 LTR MaLR 0 365 116 1971 124 0 63 chr5 118291512 118291827 -81338323 - AluSx SINE Alu -17 295 1 2116 158 5 42 chr5 118291827 118291939 -81338211 - MLT1A1 LTR MaLR -249 116 1 241 397 43 0 chr5 118292018 118292134 -81338016 - L2 LINE L2 -1 3271 3151 228 273 186 20 chr5 118292235 118292488 -81337662 - L2 LINE L2 -342 2972 2678 1474 161 60 4 chr5 118293082 118293349 -81336801 - L1MB7 LINE L1 -17 6167 5886 297 200 73 64 chr5 118293675 118293785 -81336365 - MIR3 SINE MIR -16 192 82 477 207 0 0 chr5 118293877 118293964 -81336186 + AluJ/FLAM SINE Alu 2 88 -224 900 242 14 5 chr5 118294169 118294380 -81335770 - MIR SINE MIR -47 215 3 23 33 0 0 chr5 118295195 118295225 -81334925 + AT_rich Low_complexity Low_complexity 1 30 0 1274 175 92 4 chr5 118296603 118296832 -81333318 + AluJb SINE Alu 41 289 -23 665 91 0 0 chr5 118296841 118296929 -81333221 + AluSg/x SINE Alu 172 259 -53 1321 148 62 5 chr5 118296943 118297152 -81332998 - AluJb SINE Alu -22 290 70 237 33 0 0 chr5 118297154 118297184 -81332966 + (CA)n Simple_repeat Simple_repeat 1 30 0 226 276 43 43 chr5 118297193 118297309 -81332841 - MIR3 SINE MIR -8 200 85 744 123 0 46 chr5 118297529 118297659 -81332491 - AluJb SINE Alu -5 307 184 448 103 9 47 chr5 118297664 118297771 -81332379 + (TTTC)n Simple_repeat Simple_repeat 4 106 0 2081 115 44 0 chr5 118297774 118298070 -81332080 - AluSq SINE Alu -4 309 1 270 273 189 14 chr5 118298901 118299044 -81331106 + MIR SINE MIR 90 257 -5 742 241 19 91 chr5 118300004 118300311 -81329839 - MLT1L LTR MaLR -328 287 3 310 216 14 0 chr5 118300434 118300508 -81329642 - L2 LINE L2 -1043 2271 2197 1169 155 0 48 chr5 118300627 118300769 -81329381 - L1MC1 LINE L1 0 6333 6203 2249 116 3 0 chr5 118300769 118301071 -81329079 - AluSx SINE Alu -9 303 1 1169 155 0 48 chr5 118301071 118301135 -81329015 - L1MC1 LINE L1 -130 6203 6137 662 254 87 0 chr5 118301749 118301934 -81328216 - MIR SINE MIR -4 258 58 2195 62 3 96 chr5 118302237 118302559 -81327591 + AluY SINE Alu 1 292 -19 2284 106 6 6 chr5 118302689 118303001 -81327149 + AluSq SINE Alu 1 312 -1 346 211 177 0 chr5 118303222 118303330 -81326820 - L1ME4a LINE L1 -236 5885 5755 23 33 0 0 chr5 118303364 118303394 -81326756 + AT_rich Low_complexity Low_complexity 1 30 0 203 326 42 0 chr5 118303401 118303496 -81326654 + MIR3 SINE MIR 110 208 0 226 294 0 54 chr5 118304342 118304434 -81325716 - MER5A DNA MER1_type -85 104 18 200 274 78 0 chr5 118304652 118304703 -81325447 - L2 LINE L2 -8 3305 3251 377 301 86 21 chr5 118304741 118304927 -81325223 + MIR SINE MIR 1 198 -64 1891 153 0 20 chr5 118305171 118305451 -81324699 + AluJb SINE Alu 3 278 -34 198 0 0 0 chr5 118305451 118305473 -81324677 + (CAAT)n Simple_repeat Simple_repeat 4 25 0 1891 153 0 20 chr5 118305473 118305486 -81324664 + AluJb SINE Alu 278 290 -22 2471 90 0 0 chr5 118305523 118305835 -81324315 - AluSx SINE Alu 0 312 1 514 238 124 5 chr5 118306302 118306487 -81323663 - MER112 DNA MER1_type -53 207 1 24 32 0 0 chr5 118306683 118306714 -81323436 + AT_rich Low_complexity Low_complexity 1 31 0 1569 164 27 4 chr5 118306995 118307251 -81322899 + AluJo SINE Alu 34 295 -17 1652 74 28 0 chr5 118307505 118307721 -81322429 - L1PB1 LINE L1 -1 6150 5929 360 66 6 0 chr5 118308826 118308881 -81321269 + Alu SINE Alu 259 308 0 473 182 0 0 chr5 118308884 118308961 -81321189 - FRAM/FAM SINE Alu -107 69 1 1570 100 0 0 chr5 118309108 118309308 -81320842 - AluSg/x SINE Alu -7 305 106 2109 121 0 10 chr5 118309368 118309665 -81320485 - AluSx SINE Alu -16 296 3 317 289 8 39 chr5 118309715 118309843 -81320307 - L1MDa LINE L1 -5159 1381 1258 2043 126 7 10 chr5 118309955 118310256 -81319894 + AluSx SINE Alu 1 300 -12 358 315 104 31 chr5 118310655 118310877 -81319273 + L1ME LINE L1 5036 5273 -873 454 249 141 109 chr5 118310887 118311102 -81319048 + L1ME LINE L1 5292 5499 -622 1265 168 59 0 chr5 118311102 118311322 -81318828 + MER46A DNA MER2_type 1 233 -3 454 249 141 109 chr5 118311322 118311583 -81318567 + L1ME LINE L1 5499 5800 -321 758 203 0 22 chr5 118311657 118311795 -81318355 + AluJo SINE Alu 9 143 -169 1049 163 0 0 chr5 118311851 118312011 -81318139 + AluJo SINE Alu 137 296 -16 2216 118 0 0 chr5 118313013 118313317 -81316833 - AluSx SINE Alu -8 304 1 331 268 71 9 chr5 118313586 118313698 -81316452 - L2 LINE L2 0 3313 3195 414 0 0 0 chr5 118313698 118313744 -81316406 + (TG)n Simple_repeat Simple_repeat 1 46 0 498 246 151 44 chr5 118313863 118314115 -81316035 - L1ME4a LINE L1 -155 5966 5688 2174 85 18 0 chr5 118314160 118314442 -81315708 - AluSg SINE Alu -23 287 1 2070 113 6 29 chr5 118314542 118314853 -81315297 - AluSq SINE Alu -4 309 6 1214 162 10 25 chr5 118315719 118315909 -81314241 + AluJb SINE Alu 90 278 -34 198 0 0 0 chr5 118315909 118315931 -81314219 + (CAAT)n Simple_repeat Simple_repeat 4 25 0 1214 162 10 25 chr5 118315931 118315944 -81314206 + AluJb SINE Alu 278 290 -22 2448 90 0 0 chr5 118315979 118316291 -81313859 - AluSx SINE Alu 0 312 1 514 238 124 5 chr5 118316758 118316943 -81313207 - MER112 DNA MER1_type -53 207 1 24 32 0 0 chr5 118317139 118317170 -81312980 + AT_rich Low_complexity Low_complexity 1 31 0 1569 164 27 4 chr5 118317451 118317707 -81312443 + AluJo SINE Alu 34 295 -17 1652 74 28 0 chr5 118317961 118318177 -81311973 - L1PB1 LINE L1 -1 6150 5929 360 66 6 0 chr5 118319282 118319337 -81310813 + Alu SINE Alu 259 308 0 1227 121 11 0 chr5 118319487 118319669 -81310481 + AluSq SINE Alu 129 312 -1 349 211 177 0 chr5 118319890 118319998 -81310152 - L1ME4a LINE L1 -236 5885 5755 23 33 0 0 chr5 118320032 118320062 -81310088 + AT_rich Low_complexity Low_complexity 1 30 0 229 326 42 0 chr5 118320069 118320164 -81309986 + MIR3 SINE MIR 110 208 0 258 303 0 50 chr5 118321003 118321102 -81309048 - MER5A DNA MER1_type -78 111 18 216 274 78 0 chr5 118321320 118321371 -81308779 - L2 LINE L2 -8 3305 3251 431 317 81 16 chr5 118321409 118321595 -81308555 + MIR SINE MIR 1 198 -64 1874 153 0 20 chr5 118321839 118322119 -81308031 + AluJb SINE Alu 3 278 -34 198 0 0 0 chr5 118322119 118322141 -81308009 + (CAAT)n Simple_repeat Simple_repeat 4 25 0 1874 153 0 20 chr5 118322141 118322154 -81307996 + AluJb SINE Alu 278 290 -22 22 0 0 0 chr5 118372590 118372612 -81257538 + AT_rich Low_complexity Low_complexity 1 22 0 201 274 0 41 chr5 118373150 118373223 -81256927 + CT-rich Low_complexity Low_complexity 25 94 0 209 227 0 0 chr5 118373522 118373566 -81256584 + A-rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr5 118373625 118373646 -81256504 + AT_rich Low_complexity Low_complexity 1 21 0 1929 121 40 0 chr5 118374609 118374881 -81255269 - AluSx SINE Alu -25 287 5 316 343 71 34 chr5 118374966 118375263 -81254887 + L2 LINE L2 2295 2602 -712 317 313 141 26 chr5 118375607 118375799 -81254351 + MLT1K LTR MaLR 56 269 -319 258 331 32 45 chr5 118376716 118376873 -81253277 - MER5A DNA MER1_type -22 167 13 919 226 80 26 chr5 118377271 118377497 -81252653 - MSTD LTR MaLR 0 396 159 1983 196 56 13 chr5 118377921 118378299 -81251851 - MSTD LTR MaLR 0 396 3 2706 165 101 23 chr5 118378976 118379648 -81250502 + LTR28 LTR ERV1 1 635 -1 529 294 6 33 chr5 118380232 118380412 -81249738 - MIR3 SINE MIR -3 205 31 356 256 204 29 chr5 118381699 118381871 -81248279 - L2 LINE L2 0 3313 3112 180 359 0 22 chr5 118381911 118382003 -81248147 + MIR SINE MIR 132 221 -41 319 267 99 45 chr5 118382324 118382545 -81247605 + L2 LINE L2 3079 3311 -2 1866 157 0 11 chr5 118382999 118383310 -81246840 - AluJo SINE Alu 0 308 1 1220 186 42 46 chr5 118383876 118384181 -81245969 + AluJb SINE Alu 1 304 0 2413 140 8 0 chr5 118384807 118385165 -81244985 - MER46B DNA MER2_type 0 236 1 247 290 32 121 chr5 118385169 118385293 -81244857 + L2 LINE L2 3160 3272 0 201 176 0 0 chr5 118385359 118385393 -81244757 + T-rich Low_complexity Low_complexity 2 35 0 525 289 66 7 chr5 118385570 118385722 -81244428 + MIR SINE MIR 3 163 -99 796 199 0 0 chr5 118385727 118385868 -81244282 + FLAM_C SINE Alu 1 141 -2 1636 182 9 35 chr5 118385870 118386188 -81243962 + AluJo SINE Alu 1 310 -2 235 293 40 10 chr5 118386200 118386299 -81243851 + MIR SINE MIR 161 262 0 313 299 10 10 chr5 118387629 118387726 -81242424 + LTR48B LTR ERV1 4 100 -544 * 1338 214 55 68 chr5 118387700 118388154 -81241996 + MER39 LTR ERV1 260 707 0 318 250 0 0 chr5 118388770 118388830 -81241320 - MIR SINE MIR -202 60 1 330 277 92 17 chr5 118388875 118388994 -81241156 - MIR SINE MIR -65 143 16 1050 137 19 0 chr5 118389562 118389723 -81240427 - AluSq SINE Alu -13 300 137 180 282 26 51 chr5 118389764 118389842 -81240308 - MIR SINE MIR -33 229 154 * 227 296 82 31 chr5 118389823 118389921 -81240229 + L2 LINE L2 3203 3305 -8 472 304 139 32 chr5 118390118 118390463 -81239687 - L2 LINE L2 -24 3289 2908 1182 299 116 36 chr5 118391063 118391159 -81238991 - L2 LINE L2 -696 2618 2531 2240 96 3 20 chr5 118391159 118391460 -81238690 + AluSq SINE Alu 1 296 -17 1182 299 116 36 chr5 118391460 118391885 -81238265 - L2 LINE L2 -783 2531 2035 1861 146 0 61 chr5 118391885 118392213 -81237937 + AluJb SINE Alu 1 308 -4 1182 299 116 36 chr5 118392213 118392326 -81237824 - L2 LINE L2 -1279 2035 1932 2064 115 31 0 chr5 118393743 118394029 -81236121 - AluSx SINE Alu -17 295 1 291 285 135 76 chr5 118394262 118394550 -81235600 + L2 LINE L2 2807 3111 -161 290 254 35 50 chr5 118395159 118395279 -81234871 + MIR SINE MIR 42 157 -63 25 0 0 0 chr5 118395289 118395314 -81234836 + AT_rich Low_complexity Low_complexity 1 25 0 510 276 36 38 chr5 118395826 118396029 -81234121 - MIR SINE MIR -54 208 8 186 323 10 115 chr5 118396551 118396647 -81233503 + L2 LINE L2 3092 3177 -95 475 331 43 5 chr5 118396690 118396874 -81233276 - MIR SINE MIR -13 249 59 317 233 0 11 chr5 118397149 118397239 -81232911 - L1MC5 LINE L1 -474 7487 7399 336 239 8 103 chr5 118397243 118397360 -81232790 - MIR SINE MIR -76 186 81 271 341 0 33 chr5 118397396 118397578 -81232572 + CT-rich Low_complexity Low_complexity 2 177 0 2545 17 42 0 chr5 118397687 118397976 -81232174 - AluY SINE Alu -10 301 1 2149 108 7 0 chr5 118398980 118399276 -81230874 - AluSg SINE Alu -6 304 7 2129 100 24 14 chr5 118400272 118400561 -81229589 - AluSx SINE Alu -20 292 1 27 49 0 0 chr5 118400889 118400930 -81229220 + AT_rich Low_complexity Low_complexity 1 41 0 1551 176 34 37 chr5 118401515 118401810 -81228340 + AluJo SINE Alu 1 294 -18 2589 61 3 0 chr5 118401827 118402137 -81228013 + AluY SINE Alu 1 311 0 830 223 91 52 chr5 118402317 118402721 -81227429 - MLT1F1 LTR MaLR -2 565 94 896 151 0 0 chr5 118402721 118402847 -81227303 + FLAM_C SINE Alu 1 126 -17 634 185 9 0 chr5 118402861 118402969 -81227181 - MLT1F1 LTR MaLR -458 109 1 1666 256 29 19 chr5 118403345 118403437 -81226713 + LTR16C LTR ERVL 9 99 -392 2108 116 0 7 chr5 118403437 118403769 -81226381 - AluSx SINE Alu 0 330 1 1666 256 29 19 chr5 118403769 118404151 -81225999 + LTR16C LTR ERVL 99 489 -2 2935 114 15 37 chr5 118404304 118404759 -81225391 - MER65A LTR ERV1 0 445 1 9722 209 14 18 chr5 118404882 118408076 -81222074 + L1PA15 LINE L1 1324 4498 -2299 5637 113 22 23 chr5 118408076 118409048 -81221102 + L1PA15 LINE L1 5294 6290 -526 2594 99 6 0 chr5 118409048 118409401 -81220749 + THE1A LTR MaLR 1 355 0 5637 113 22 23 chr5 118409401 118409927 -81220223 + L1PA15 LINE L1 6290 6815 -1 344 316 52 0 chr5 118409949 118410085 -81220065 + HAL1b LINE L1 1204 1346 -2 1728 139 48 0 chr5 118410124 118410433 -81219717 + L1MA9 LINE L1 5989 6312 0 410 298 18 0 chr5 118410819 118410933 -81219217 + MER5A DNA MER1_type 74 189 0 325 244 100 0 chr5 118410948 118411038 -81219112 - L2 LINE L2 0 3313 3215 2028 126 7 7 chr5 118411051 118411353 -81218797 - AluSx SINE Alu -10 302 1 30 77 0 0 chr5 118411359 118411424 -81218726 + AT_rich Low_complexity Low_complexity 1 65 0 396 229 27 66 chr5 118411517 118411700 -81218450 + L1ME4a LINE L1 5943 6118 -3 1721 181 10 0 chr5 118411986 118412284 -81217866 - AluJo SINE Alu -11 301 1 300 277 85 40 chr5 118412293 118412470 -81217680 - L1ME4a LINE L1 -10 6111 5927 267 119 24 0 chr5 118412472 118412514 -81217636 - Tigger3b DNA MER2_type 0 1231 1189 6429 115 36 64 chr5 118412544 118413122 -81217028 - Tigger3b DNA MER2_type -1826 1202 609 933 119 0 15 chr5 118413122 118413256 -81216894 + FLAM_C SINE Alu 2 133 0 6429 115 36 64 chr5 118413256 118413567 -81216583 - Tigger3b DNA MER2_type -2419 609 354 2226 92 0 0 chr5 118413567 118413886 -81216264 - AluSx SINE Alu 0 319 1 6429 115 36 64 chr5 118413886 118414231 -81215919 - Tigger3b DNA MER2_type -2674 354 1 219 255 0 0 chr5 118414232 118414279 -81215871 + (CATA)n Simple_repeat Simple_repeat 2 48 0 228 267 35 17 chr5 118414581 118414697 -81215453 - L1M4 LINE L1 -1906 4240 4123 190 121 86 69 chr5 118415674 118415732 -81214418 - L3b LINE CR1 -229 1354 1296 2375 94 3 0 chr5 118415945 118416244 -81213906 + AluSq SINE Alu 1 300 -13 216 380 31 12 chr5 118416484 118416647 -81213503 + L2 LINE L2 2507 2672 -642 784 221 20 15 chr5 118416880 118417075 -81213075 + MER20 DNA MER1_type 24 219 0 4560 186 34 8 chr5 118417648 118419350 -81210800 - L1MB3 LINE L1 0 6183 4444 35353 88 11 10 chr5 118419357 118425502 -81204648 - L1PA6 LINE L1 0 6154 4 1663 195 7 23 chr5 118425716 118426023 -81204127 - AluJo SINE Alu -10 302 1 231 36 0 0 chr5 118427047 118427075 -81203075 + (CAT)n Simple_repeat Simple_repeat 3 30 0 198 341 236 8 chr5 118428098 118428221 -81201929 + MER5A DNA MER1_type 4 154 -35 1349 225 39 44 chr5 118428635 118429022 -81201128 - MLT1B LTR MaLR -5 385 1 1339 245 5 57 chr5 118429022 118429458 -81200692 + L1ME1 LINE L1 5744 6156 -10 295 298 50 16 chr5 118430995 118431116 -81199034 - L3b LINE CR1 -198 1385 1261 810 142 0 15 chr5 118431144 118431278 -81198872 + FLAM_C SINE Alu 2 133 0 1330 170 11 0 chr5 118432931 118433202 -81196948 + L1MA4 LINE L1 6016 6289 -11 1207 228 101 98 chr5 118437479 118438243 -81191907 + LTR41 LTR ERVL 1 766 -7 180 0 0 0 chr5 118438308 118438328 -81191822 + (CA)n Simple_repeat Simple_repeat 2 21 0 234 0 0 0 chr5 118438442 118438468 -81191682 + (CA)n Simple_repeat Simple_repeat 1 26 0 1731 227 46 36 chr5 118439791 118440351 -81189799 + L1ME1 LINE L1 4836 5401 -745 2222 202 80 7 chr5 118440364 118440913 -81189237 + L1ME1 LINE L1 5577 6165 -1 3157 203 53 44 chr5 118441321 118441362 -81188788 + MER63C DNA MER1_type 1 40 -1020 360 59 0 0 chr5 118441362 118441413 -81188737 + (CA)n Simple_repeat Simple_repeat 2 52 0 3157 203 53 44 chr5 118441413 118441461 -81188689 + MER63C DNA MER1_type 40 86 -974 2046 134 3 28 chr5 118441461 118441781 -81188369 + AluSx SINE Alu 1 312 0 3157 203 53 44 chr5 118441781 118442558 -81187592 + MER63C DNA MER1_type 86 876 -54 347 217 132 0 chr5 118442968 118443074 -81187076 + L1ME4a LINE L1 5974 6093 -28 892 265 82 23 chr5 118443569 118443875 -81186275 - MLT1E LTR MaLR -26 567 244 661 205 33 47 chr5 118444032 118444247 -81185903 - L1M4 LINE L1 -2189 3957 3746 1037 206 93 35 chr5 118444257 118444422 -81185728 - MER2 DNA MER2_type -8 337 183 1762 186 39 0 chr5 118444422 118444756 -81185394 + MER7A DNA MER2_type 1 345 -1 1037 206 93 35 chr5 118444756 118444900 -81185250 - MER2 DNA MER2_type -162 183 10 3319 224 80 30 chr5 118444907 118445769 -81184381 - L1M4 LINE L1 -2397 3749 2812 2452 80 0 0 chr5 118445769 118446068 -81184082 + AluSq SINE Alu 3 301 -12 3319 224 80 30 chr5 118446068 118446373 -81183777 - L1M4 LINE L1 -3334 2812 2524 1222 191 130 10 chr5 118446394 118446786 -81183364 - MER69 DNA AcHobo -56 2470 2032 1879 232 103 12 chr5 118446834 118447339 -81182811 - MER69 DNA AcHobo -1958 568 18 299 194 22 33 chr5 118447446 118447542 -81182608 - L1MC5 LINE L1 0 7995 7844 1130 118 0 0 chr5 118447969 118448138 -81182012 + MLT2B1 LTR ERVL 1 169 -351 * 1180 202 58 19 chr5 118448131 118448389 -81181761 + MLT2B2 LTR ERVL 248 515 0 317 308 128 36 chr5 118448389 118448584 -81181566 - MIR SINE MIR -36 226 14 382 167 0 0 chr5 118448873 118448939 -81181211 + Charlie5 DNA MER1_type 1 66 -2546 745 60 36 121 chr5 118448941 118449007 -81181143 + Charlie5 DNA MER1_type 2469 2539 -85 1631 171 18 4 chr5 118449007 118449281 -81180869 - AluJo SINE Alu -14 298 21 745 60 36 121 chr5 118449281 118449380 -81180770 + Charlie5 DNA MER1_type 2539 2620 -4 419 301 161 24 chr5 118449381 118449710 -81180440 + LTR67 LTR ERVL 129 502 -55 247 308 83 51 chr5 118449908 118450064 -81180086 - MIR SINE MIR -25 237 77 1865 221 28 15 chr5 118450151 118450612 -81179538 - MLT1C LTR MaLR 0 467 1 25 75 0 0 chr5 118451136 118451189 -81178961 + AT_rich Low_complexity Low_complexity 1 53 0 377 196 171 11 chr5 118451403 118451526 -81178624 + MIR SINE MIR 46 185 -62 634 314 94 30 chr5 118451798 118452203 -81177947 - L2 LINE L2 0 3313 2883 811 271 139 33 chr5 118452232 118452716 -81177434 + L2 LINE L2 2761 3310 -3 184 277 0 0 chr5 118452952 118452999 -81177151 + MIR SINE MIR 206 252 -10 1754 166 7 17 chr5 118455350 118455651 -81174499 + AluJb SINE Alu 1 298 -14 390 250 116 73 chr5 118456430 118456662 -81173488 + MIR SINE MIR 11 252 -10 203 293 74 83 chr5 118456683 118456789 -81173361 + L2 LINE L2 1858 1963 -1351 2136 133 0 45 chr5 118456789 118457142 -81173008 + MER1B DNA MER1_type 1 337 0 203 293 74 83 chr5 118457142 118457264 -81172886 + L2 LINE L2 1963 2084 -1230 886 197 6 11 chr5 118457290 118457468 -81172682 + AluJo SINE Alu 121 297 -15 1347 219 13 36 chr5 118458120 118458421 -81171729 - AluJb SINE Alu -17 295 2 2292 107 0 0 chr5 118458621 118458919 -81171231 + AluSx SINE Alu 1 298 -14 710 232 167 4 chr5 118458923 118459169 -81170981 - MLT1L LTR MaLR -78 537 252 1951 124 35 0 chr5 118459408 118459690 -81170460 - AluSx SINE Alu -20 292 1 450 255 44 25 chr5 118459902 118460063 -81170087 + MER20B DNA MER1_type 36 202 -17 286 339 106 13 chr5 118460140 118460367 -81169783 - MLT1L LTR MaLR -24 591 344 370 242 184 79 chr5 118460927 118461204 -81168946 - L2 LINE L2 -2 3311 3006 383 237 44 0 chr5 118461279 118461393 -81168757 - L1MDa LINE L1 -2544 3671 3553 749 123 0 0 chr5 118461399 118461521 -81168629 - L1MA4A LINE L1 -23 6280 6159 956 255 156 37 chr5 118461521 118462598 -81167552 - L1MDa LINE L1 -2639 3576 2372 1743 139 76 7 chr5 118462733 118463021 -81167129 - AluSg SINE Alu -2 308 1 358 257 122 46 chr5 118463228 118463829 -81166321 - L1MDa LINE L1 -4600 1615 1012 248 213 0 75 chr5 118464531 118464611 -81165539 + L1 LINE L1 4086 4159 -1987 903 201 22 6 chr5 118464950 118465129 -81165021 - MER58A DNA MER1_type 0 224 43 249 192 50 61 chr5 118465499 118465598 -81164552 - L1MEd LINE L1 -1118 5730 5633 654 187 81 0 chr5 118465931 118466054 -81164096 + FLAM_C SINE Alu 1 133 0 248 268 186 15 chr5 118466164 118466563 -81163587 - L1MEd LINE L1 -1905 4943 4477 1639 96 74 44 chr5 118467211 118467511 -81162639 + AluSg SINE Alu 6 313 0 352 302 34 0 chr5 118467576 118467725 -81162425 - L1MEd LINE L1 -3118 3730 3577 599 320 84 0 chr5 118467997 118468222 -81161928 - MIR SINE MIR -8 254 11 1190 204 0 14 chr5 118468922 118469133 -81161017 + AluJo SINE Alu 5 212 -100 365 189 42 21 chr5 118469201 118469296 -81160854 + MLT1C LTR MaLR 66 162 -305 2257 171 58 30 chr5 118469666 118470135 -81160015 + MLT1D LTR MaLR 17 498 -7 339 339 92 28 chr5 118470140 118470201 -81159949 + L1ME3A LINE L1 5614 5670 -500 2385 175 141 12 chr5 118470201 118470703 -81159447 + MLT1F1 LTR MaLR 1 567 0 339 339 92 28 chr5 118470703 118470892 -81159258 + L1ME3A LINE L1 5670 5880 -290 2840 156 33 4 chr5 118470933 118471453 -81158697 + L1MB3 LINE L1 5645 6179 -4 2026 136 3 10 chr5 118472243 118472545 -81157605 + AluJb SINE Alu 11 310 -2 289 203 22 51 chr5 118473399 118473537 -81156613 + A-rich Low_complexity Low_complexity 5 138 0 287 263 10 0 chr5 118473908 118474007 -81156143 - L1MEd LINE L1 -4297 2552 2453 766 281 88 75 chr5 118474062 118474665 -81155485 - L1MEd LINE L1 -4921 2108 1472 2151 133 3 16 chr5 118475619 118475935 -81154215 - AluSx SINE Alu 0 312 1 2030 118 16 26 chr5 118475951 118476255 -81153895 - AluSx SINE Alu -11 301 1 34 0 0 0 chr5 118476306 118476340 -81153810 + AT_rich Low_complexity Low_complexity 1 34 0 323 174 0 204 chr5 118476858 118476990 -81153160 - MIR3 SINE MIR -12 196 92 * 1097 289 177 60 chr5 118476943 118477544 -81152606 - L2 LINE L2 -1829 1485 737 2288 123 7 0 chr5 118477544 118477853 -81152297 + AluSx SINE Alu 1 311 -1 1097 289 177 60 chr5 118477853 118478179 -81151971 - L2 LINE L2 -2577 737 450 1166 83 73 44 chr5 118478187 118478391 -81151759 + MER30 DNA MER1_type 1 210 -20 513 320 66 22 chr5 118478418 118478599 -81151551 - L2 LINE L2 -2851 463 275 3933 144 62 93 chr5 118478697 118479608 -81150542 - MER21A LTR ERV1 0 931 49 1709 163 57 3 chr5 118479608 118479891 -81150259 + AluJb SINE Alu 1 298 -14 3933 144 62 93 chr5 118479891 118479925 -81150225 - MER21A LTR ERV1 -882 49 15 243 318 269 14 chr5 118480601 118480824 -81149326 - L2 LINE L2 -1 3271 2992 * 246 352 69 84 chr5 118480822 118481274 -81148876 - L2 LINE L2 -1 3271 2827 1689 151 44 4 chr5 118481390 118481685 -81148465 - AluSx SINE Alu 0 306 1 1871 136 7 24 chr5 118481884 118482178 -81147972 + AluJb SINE Alu 1 289 -23 4047 141 108 9 chr5 118482366 118483118 -81147032 - LTR1B LTR ERV1 0 826 1 636 26 13 0 chr5 118483448 118483526 -81146624 - MADE1 DNA Mariner 0 80 2 321 196 44 100 chr5 118484339 118484579 -81145571 - MSTC LTR MaLR -157 239 1 1625 167 43 0 chr5 118484673 118484954 -81145196 - AluJb SINE Alu -19 293 1 1399 134 144 17 chr5 118485017 118485209 -81144941 + MER44D DNA MER2_type 3 169 -2322 1794 137 46 38 chr5 118485209 118485581 -81144569 - THE1C LTR MaLR 0 375 1 1399 134 144 17 chr5 118485581 118485687 -81144463 + MER44D DNA MER2_type 169 609 0 262 251 43 6 chr5 118485694 118485789 -81144361 + MLT1L LTR MaLR 110 267 -305 * 322 159 111 0 chr5 118485788 118485851 -81144299 + 7SLRNA srpRNA srpRNA 17 86 -234 552 157 0 0 chr5 118486269 118486352 -81143798 + AluJ/FLAM SINE Alu 4 86 -226 2183 127 7 0 chr5 118486760 118487067 -81143083 + AluSq SINE Alu 1 309 -4 313 277 0 0 chr5 118487099 118487182 -81142968 - MER5A DNA MER1_type -98 91 9 412 220 208 0 chr5 118487192 118487360 -81142790 + HAL1 LINE L1 2099 2301 -206 714 205 178 62 chr5 118487516 118487619 -81142531 + AluJb SINE Alu 2 92 -210 2044 101 0 27 chr5 118487619 118487917 -81142233 - AluSx SINE Alu -22 290 1 714 205 178 62 chr5 118487917 118488071 -81142079 + AluJb SINE Alu 92 289 -13 219 36 0 0 chr5 118488123 118488151 -81141999 + (A)n Simple_repeat Simple_repeat 1 28 0 285 147 29 44 chr5 118488221 118488289 -81141861 - MSTD LTR MaLR -2 394 328 1555 141 4 12 chr5 118488289 118488537 -81141613 + AluSg SINE Alu 45 290 -20 627 332 107 42 chr5 118488593 118489276 -81140874 - L2 LINE L2 -1558 1756 1030 704 155 70 0 chr5 118489334 118489476 -81140674 + AluSx SINE Alu 61 212 -100 1899 129 7 4 chr5 118490772 118491052 -81139098 + AluSg SINE Alu 17 297 -13 5437 120 43 63 chr5 118491098 118491331 -81138819 + Tigger1 DNA MER2_type 1 237 -2181 2039 87 25 4 chr5 118491331 118491607 -81138543 + AluSc SINE Alu 1 282 -27 5437 120 43 63 chr5 118491607 118492461 -81137689 + Tigger1 DNA MER2_type 237 1066 -1352 6114 129 12 113 chr5 118492471 118492797 -81137353 + Tigger1 DNA MER2_type 951 1309 -1109 1727 153 14 10 chr5 118492797 118493085 -81137065 - AluJo SINE Alu -23 289 1 6114 129 12 113 chr5 118493085 118494391 -81135759 + Tigger1 DNA MER2_type 1309 2417 -1 228 235 86 25 chr5 118494617 118494698 -81135452 - MIR SINE MIR -140 122 37 1226 141 217 12 chr5 118495130 118495379 -81134771 + AluJb SINE Alu 1 300 -12 671 170 170 48 chr5 118495389 118495536 -81134614 + AluJb SINE Alu 130 294 -18 372 337 48 18 chr5 118495609 118495944 -81134206 - L1 LINE L1 -2255 3891 3547 2280 85 3 13 chr5 118496025 118496330 -81133820 - AluSc SINE Alu -7 302 1 2349 105 0 3 chr5 118496496 118496809 -81133341 - AluSx SINE Alu 0 312 1 301 281 83 70 chr5 118497387 118497615 -81132535 - L1M4 LINE L1 -1125 5021 4791 693 159 63 16 chr5 118497629 118497818 -81132332 - L1MD3 LINE L1 0 7995 7798 226 305 21 21 chr5 118497936 118498077 -81132073 - L1M4 LINE L1 -1542 4604 4464 383 294 118 11 chr5 118498083 118498353 -81131797 - L1M4 LINE L1 -1712 4434 4133 313 231 142 30 chr5 118498385 118498554 -81131596 - L1M4 LINE L1 -2093 4053 3866 259 267 75 0 chr5 118498601 118498721 -81131429 - L1 LINE L1 -2694 3452 3324 1151 81 61 46 chr5 118500475 118500598 -81129552 - MER30 DNA MER1_type -30 200 71 2186 108 0 13 chr5 118500598 118500904 -81129246 - AluSx SINE Alu -10 302 1 1151 81 61 46 chr5 118500904 118500977 -81129173 - MER30 DNA MER1_type -159 71 1 181 402 12 0 chr5 118501424 118501506 -81128644 + L2 LINE L2 2979 3061 -211 523 301 49 63 chr5 118501647 118502119 -81128031 - L2 LINE L2 -39 3274 2737 520 159 71 63 chr5 118502122 118502248 -81127902 - MLT1E2 LTR MaLR -445 181 55 259 267 0 78 chr5 118502683 118502773 -81127377 - L2 LINE L2 0 3313 3231 226 325 123 12 chr5 118502883 118503046 -81127104 + MIR SINE MIR 49 229 -33 324 175 98 137 chr5 118503052 118503235 -81126915 + MER69 DNA AcHobo 2 2526 0 428 299 175 11 chr5 118503409 118503740 -81126410 - L1ME4a LINE L1 -123 5998 5606 1434 193 133 11 chr5 118503740 118504093 -81126057 - MSTD LTR MaLR 0 396 1 428 299 175 11 chr5 118504093 118504109 -81126041 - L1ME4a LINE L1 -515 5606 5594 1988 135 0 0 chr5 118504224 118504534 -81125616 - AluSx SINE Alu 0 310 1 411 335 26 20 chr5 118505404 118505556 -81124594 - MIR SINE MIR -76 186 34 1933 198 23 73 chr5 118505694 118506225 -81123925 + MLT1D LTR MaLR 1 504 -1 757 228 0 0 chr5 118506524 118506673 -81123477 + FRAM SINE Alu 6 154 -22 222 216 39 0 chr5 118506677 118506728 -81123422 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 954 135 0 0 chr5 118507266 118507399 -81122751 - AluSg/x SINE Alu -15 297 165 1730 158 14 7 chr5 118507666 118507950 -81122200 - AluJb SINE Alu -26 286 1 216 97 0 0 chr5 118507969 118508000 -81122150 + (TA)n Simple_repeat Simple_repeat 1 31 0 21 57 0 0 chr5 118508125 118508160 -81121990 + AT_rich Low_complexity Low_complexity 1 35 0 331 289 150 23 chr5 118508875 118509048 -81121102 - L1ME4a LINE L1 -50 6071 5877 2225 105 7 0 chr5 118509106 118509402 -81120748 + AluSc SINE Alu 1 298 -11 627 232 175 16 chr5 118509636 118509830 -81120320 - MIR SINE MIR -30 232 8 613 158 0 75 chr5 118512050 118512183 -81117967 + FLAM_A SINE Alu 1 123 -10 2020 129 7 10 chr5 118512987 118513289 -81116861 - AluJb SINE Alu -1 311 11 24 0 0 0 chr5 118513903 118513927 -81116223 + AT_rich Low_complexity Low_complexity 1 24 0 3238 201 78 20 chr5 118514864 118515708 -81114442 + L1MB8 LINE L1 5274 6166 -12 571 193 0 53 chr5 118515960 118516074 -81114076 + MIR SINE MIR 43 150 -112 1962 105 94 0 chr5 118516074 118516351 -81113799 + AluSx SINE Alu 1 303 -9 621 324 83 57 chr5 118516438 118517345 -81112805 + L2 LINE L2 2376 3305 -8 23 54 0 0 chr5 118517678 118517715 -81112435 + AT_rich Low_complexity Low_complexity 1 37 0 29 60 0 0 chr5 118519713 118519763 -81110387 + AT_rich Low_complexity Low_complexity 1 50 0 339 260 69 55 chr5 118520968 118521152 -81108998 + MIR3 SINE MIR 2 191 -17 810 131 8 0 chr5 118521352 118521482 -81108668 + FLAM_C SINE Alu 3 133 0 1370 159 17 4 chr5 118522340 118522572 -81107578 - MER46A DNA MER2_type 0 236 2 1134 196 19 14 chr5 118522974 118523183 -81106967 + AluJo SINE Alu 1 210 -102 213 65 0 0 chr5 118523209 118523240 -81106910 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 687 195 79 69 chr5 118523385 118523703 -81106447 + L1MC5 LINE L1 7609 7929 -32 2218 100 3 7 chr5 118523836 118524146 -81106004 - AluSg SINE Alu -1 309 1 1827 117 90 0 chr5 118524159 118524425 -81105725 - AluSq SINE Alu -23 290 1 21 0 0 0 chr5 118524578 118524599 -81105551 + AT_rich Low_complexity Low_complexity 1 21 0 2352 88 3 0 chr5 118524871 118525177 -81104973 - AluSc SINE Alu -2 307 1 2362 95 0 0 chr5 118526335 118526630 -81103520 - AluY SINE Alu -15 296 2 701 216 87 64 chr5 118526677 118527158 -81102992 + L1ME3 LINE L1 1227 1923 -4887 405 238 49 37 chr5 118527136 118527300 -81102850 + L1M4 LINE L1 5811 5976 -965 * 2523 211 97 36 chr5 118527309 118528292 -81101858 + L1ME3 LINE L1 5830 6876 -81 310 283 102 18 chr5 118528369 118528535 -81101615 - MARNA DNA Mariner -239 347 168 270 182 0 0 chr5 118528544 118528588 -81101562 + MARNA DNA Mariner 449 492 -94 21 0 0 0 chr5 118528763 118528784 -81101366 + AT_rich Low_complexity Low_complexity 1 21 0 230 202 60 107 chr5 118528932 118529016 -81101134 - L1MC/D LINE L1 -1993 5815 5736 24 77 0 0 chr5 118529024 118529076 -81101074 + AT_rich Low_complexity Low_complexity 1 52 0 681 161 161 15 chr5 118529302 118529439 -81100711 + MER5A DNA MER1_type 33 189 0 2408 49 0 29 chr5 118529478 118529786 -81100364 + AluY SINE Alu 1 299 -12 273 358 186 22 chr5 118529788 118530293 -81099857 - L2 LINE L2 -591 2723 2136 1707 159 7 36 chr5 118530625 118530926 -81099224 - AluJo SINE Alu -10 302 11 23 0 0 0 chr5 118531158 118531181 -81098969 + AT_rich Low_complexity Low_complexity 1 23 0 257 221 244 12 chr5 118531474 118531560 -81098590 + MIR SINE MIR 40 145 -63 1443 142 0 17 chr5 118533137 118533370 -81096780 - AluSg/x SINE Alu 0 312 84 698 164 0 89 chr5 118533453 118533562 -81096588 + FLAM_A SINE Alu 1 95 -207 2112 131 3 7 chr5 118533562 118533867 -81096283 - AluSq SINE Alu -9 304 1 698 164 0 89 chr5 118533867 118533903 -81096247 + FLAM_A SINE Alu 95 133 -169 1058 137 71 0 chr5 118534043 118534254 -81095896 - L1MA5A LINE L1 0 6297 6072 343 262 0 0 chr5 118534260 118534367 -81095783 + (CAGTA)n Simple_repeat Simple_repeat 3 109 0 755 182 58 4 chr5 118534367 118534545 -81095605 - L1MA5A LINE L1 -55 6114 5947 2265 100 10 3 chr5 118534563 118534873 -81095277 - AluSx SINE Alu 0 312 1 324 306 116 0 chr5 118535170 118535291 -81094859 + MIR SINE MIR 84 218 -44 292 256 167 0 chr5 118536212 118536302 -81093848 - HAL1 LINE L1 -153 2354 2250 191 100 0 50 chr5 118536364 118536404 -81093746 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 238 323 0 40 chr5 118536823 118536922 -81093228 - HAL1 LINE L1 -583 1924 1830 339 245 118 0 chr5 118536993 118537095 -81093055 - HAL1 LINE L1 -834 1673 1560 327 217 14 0 chr5 118537110 118537179 -81092971 - HAL1 LINE L1 -997 1510 1441 368 268 72 13 chr5 118537182 118537335 -81092815 - HAL1 LINE L1 -1112 1395 1234 395 284 71 0 chr5 118537442 118537583 -81092567 + MIR SINE MIR 112 262 0 242 177 32 48 chr5 118537598 118537660 -81092490 - L2 LINE L2 0 3313 3253 2200 127 0 0 chr5 118538040 118538340 -81091810 - AluSx SINE Alu -12 300 1 1196 143 87 13 chr5 118538941 118539172 -81090978 - Tigger2 DNA MER2_type 0 2718 2471 395 152 45 0 chr5 118539163 118539229 -81090921 - Tigger2 DNA MER2_type -2649 69 1 * 442 254 168 67 chr5 118539343 118539767 -81090383 + L1MC4a LINE L1 5348 5728 -2080 955 133 205 0 chr5 118539767 118539962 -81090188 + MER46A DNA MER2_type 2 236 0 442 254 168 67 chr5 118539962 118539988 -81090162 + L1MC4a LINE L1 5728 5750 -2058 1744 151 19 51 chr5 118539988 118540300 -81089850 - AluJb SINE Alu -10 302 1 442 254 168 67 chr5 118540300 118540372 -81089778 + L1MC4a LINE L1 5750 5924 -1884 22 0 0 0 chr5 118541129 118541151 -81088999 + AT_rich Low_complexity Low_complexity 1 22 0 2067 132 0 23 chr5 118542087 118542397 -81087753 + AluSx SINE Alu 9 311 -1 563 200 0 0 chr5 118543886 118543991 -81086159 + U6 snRNA snRNA 1 105 -2 22 35 0 0 chr5 118543991 118544020 -81086130 + AT_rich Low_complexity Low_complexity 1 29 0 2146 116 10 0 chr5 118544074 118544366 -81085784 - AluY SINE Alu -16 295 1 1523 123 123 0 chr5 118547287 118547531 -81082619 - AluSx SINE Alu -12 300 27 2191 109 48 28 chr5 118547549 118547906 -81082244 - THE1B LTR MaLR 0 364 1 576 293 44 0 chr5 118548166 118548436 -81081714 + L1MC/D LINE L1 5005 5286 -860 1595 161 0 16 chr5 118549035 118549289 -81080861 + AluJo SINE Alu 2 251 -61 225 154 0 0 chr5 118549289 118549328 -81080822 + A-rich Low_complexity Low_complexity 1 39 0 525 255 38 105 chr5 118549330 118549581 -81080569 + L1MC/D LINE L1 5291 5507 -2301 2093 148 0 0 chr5 118549581 118549891 -81080259 - AluSx SINE Alu -2 310 1 525 255 38 105 chr5 118549891 118550039 -81080111 + L1MC/D LINE L1 5507 5663 -2145 389 234 12 0 chr5 118550361 118550444 -81079706 + AluS SINE Alu 1 76 -224 363 320 112 13 chr5 118550613 118550836 -81079314 + L1M4 LINE L1 4176 4420 -1726 536 320 80 19 chr5 118550922 118551297 -81078853 + L1M4 LINE L1 4672 5069 -1077 310 265 84 60 chr5 118551427 118551481 -81078669 + L1M LINE L1 5256 5307 -867 785 209 43 0 chr5 118551481 118551644 -81078506 - FAM SINE Alu -3 172 3 310 265 84 60 chr5 118551644 118551755 -81078395 + L1M LINE L1 5307 5425 -749 254 26 51 0 chr5 118552075 118552114 -81078036 + L1PA2 LINE L1 6113 6153 -2 973 161 69 65 chr5 118552176 118552269 -81077881 - MER58A DNA MER1_type -2197 223 132 2207 135 0 0 chr5 118552269 118552581 -81077569 - AluSx SINE Alu 0 312 1 973 161 69 65 chr5 118552581 118552704 -81077446 - MER58A DNA MER1_type -2288 132 6 377 309 109 37 chr5 118552706 118553082 -81077068 - L1MC/D LINE L1 -514 5648 5257 345 255 19 9 chr5 118553303 118553409 -81076741 + (TA)n Simple_repeat Simple_repeat 1 107 0 425 243 134 35 chr5 118553497 118553781 -81076369 - L1MC/D LINE L1 -1302 4844 4533 766 239 137 5 chr5 118553781 118553978 -81076172 + MIR SINE MIR 16 238 -24 511 302 128 6 chr5 118554005 118554502 -81075648 - L1MC/D LINE L1 -1632 4514 3942 776 179 7 0 chr5 118554627 118554767 -81075383 - MER46A DNA MER2_type -85 151 11 23 0 0 0 chr5 118554972 118554995 -81075155 + AT_rich Low_complexity Low_complexity 1 23 0 1861 149 10 0 chr5 118555251 118555553 -81074597 - AluJb SINE Alu -7 305 1 2057 107 7 17 chr5 118555723 118556021 -81074129 - AluSg SINE Alu -14 296 2 1378 126 63 25 chr5 118556823 118557062 -81073088 + MER1B DNA MER1_type 128 335 -4 22 35 0 0 chr5 118557115 118557144 -81073006 + AT_rich Low_complexity Low_complexity 1 29 0 2293 100 0 6 chr5 118557357 118557668 -81072482 + AluSg SINE Alu 1 309 -1 22 35 0 0 chr5 118557778 118557807 -81072343 + AT_rich Low_complexity Low_complexity 1 29 0 1455 279 105 58 chr5 118558241 118559041 -81071109 + HAL1 LINE L1 21 858 -1649 866 247 49 46 chr5 118559046 118559374 -81070776 + HAL1 LINE L1 1202 1530 -977 1715 130 51 0 chr5 118559519 118559773 -81070377 - AluSx SINE Alu -45 267 1 467 270 29 52 chr5 118559829 118560003 -81070147 - MER21B LTR ERV1 -124 739 570 1559 253 65 97 chr5 118560013 118560418 -81069732 - MER21B LTR ERV1 -133 730 359 2256 103 0 3 chr5 118560418 118560719 -81069431 - AluSg SINE Alu -10 300 1 1559 253 65 97 chr5 118560719 118561065 -81069085 - MER21B LTR ERV1 -504 359 3 1286 278 64 21 chr5 118561086 118561601 -81068549 + HAL1 LINE L1 1611 2147 -360 240 316 140 9 chr5 118561729 118561843 -81068307 - MIR SINE MIR -31 231 103 538 264 97 46 chr5 118562012 118562228 -81067922 - MIR SINE MIR -34 228 2 902 167 135 21 chr5 118562287 118562479 -81067671 - MER20 DNA MER1_type -5 214 1 24 53 0 0 chr5 118562732 118562770 -81067380 + AT_rich Low_complexity Low_complexity 1 38 0 252 288 91 61 chr5 118563888 118564020 -81066130 - MIR3 SINE MIR -1 207 72 732 269 5 33 chr5 118564071 118564283 -81065867 - MIR SINE MIR -51 211 6 306 0 0 0 chr5 118564492 118564526 -81065624 + (CA)n Simple_repeat Simple_repeat 2 35 0 786 179 8 22 chr5 118564678 118564812 -81065338 + FLAM_C SINE Alu 2 133 -10 1740 162 3 26 chr5 118565169 118565477 -81064673 - AluJb SINE Alu -10 302 2 1500 190 18 11 chr5 118565533 118565812 -81064338 + AluJo SINE Alu 1 281 -31 301 148 82 16 chr5 118567678 118567739 -81062411 + U3 snRNA snRNA 1 65 -152 1559 170 85 3 chr5 118568212 118568495 -81061655 - AluJb SINE Alu -6 306 1 1491 157 35 20 chr5 118568671 118568926 -81061224 - AluJo SINE Alu -53 259 1 2031 111 14 10 chr5 118569324 118569613 -81060537 - AluSg SINE Alu -20 290 1 1119 196 13 40 chr5 118569724 118569949 -81060201 - MER20 DNA MER1_type 0 219 1 735 233 56 6 chr5 118570444 118571131 -81059019 + L1ME1 LINE L1 5338 6161 -5 2129 105 0 0 chr5 118571290 118571567 -81058583 - AluSc SINE Alu -16 293 17 3391 192 26 20 chr5 118572584 118573225 -81056925 - L1M4c LINE L1 -5722 662 18 222 235 86 25 chr5 118574096 118574177 -81055973 + MIR SINE MIR 37 122 -140 9205 119 17 34 chr5 118574400 118575565 -81054585 - Tigger1 DNA MER2_type -1 2417 1281 1799 155 7 14 chr5 118575565 118575856 -81054294 + AluJo SINE Alu 1 289 -23 9205 119 17 34 chr5 118575856 118576182 -81053968 - Tigger1 DNA MER2_type -1137 1281 951 4877 115 26 58 chr5 118576192 118577037 -81053113 - Tigger1 DNA MER2_type -1352 1066 249 2039 87 29 0 chr5 118577046 118577321 -81052829 - AluSg SINE Alu -27 283 1 390 138 149 11 chr5 118578501 118578595 -81051555 - MER113 DNA MER1_type? -351 170 64 1179 137 64 71 chr5 118578650 118579075 -81051075 - MER51A LTR ERV1 0 634 2 730 263 64 66 chr5 118579601 118579959 -81050191 - L1ME3A LINE L1 -4 6162 5808 956 160 21 62 chr5 118579965 118580159 -81049991 - MER20 DNA MER1_type 0 219 34 647 231 133 36 chr5 118580228 118580268 -81049882 - L1ME3A LINE L1 -366 5804 5769 1529 163 81 11 chr5 118580268 118580551 -81049599 - AluJb SINE Alu -9 303 1 647 231 133 36 chr5 118580551 118580735 -81049415 - L1ME3A LINE L1 -401 5769 5558 504 223 45 9 chr5 118580756 118580868 -81049282 - L2 LINE L2 -16 3297 3182 24 0 0 0 chr5 118581618 118581642 -81048508 + AT_rich Low_complexity Low_complexity 1 24 0 2165 90 24 7 chr5 118582252 118582540 -81047610 - AluSc SINE Alu -16 293 1 601 170 71 36 chr5 118582557 118582669 -81047481 - FLAM_C SINE Alu -26 117 2 1406 172 62 52 chr5 118582683 118582758 -81047392 - AluJb SINE Alu -19 293 220 2359 95 3 0 chr5 118582758 118583064 -81047086 - AluSp SINE Alu -6 307 1 1406 172 62 52 chr5 118583064 118583278 -81046872 - AluJb SINE Alu -92 220 1 210 175 25 0 chr5 118584139 118584179 -81045971 + GA-rich Low_complexity Low_complexity 4 44 0 2287 88 3 10 chr5 118585031 118585345 -81044805 - AluSp SINE Alu 0 313 1 585 157 0 0 chr5 118585452 118585535 -81044615 - AluJ/FLAM SINE Alu -226 86 4 345 159 111 0 chr5 118585953 118586016 -81044134 - 7SLRNA srpRNA srpRNA -234 86 17 287 251 43 6 chr5 118586015 118586110 -81044040 - MLT1L LTR MaLR -305 267 110 * 228 100 0 0 chr5 118586084 118586114 -81044036 - LTR67 LTR ERVL -418 139 110 * 1563 137 140 17 chr5 118586117 118586224 -81043926 - MER44D DNA MER2_type -1882 609 517 2016 135 46 35 chr5 118586224 118586595 -81043555 + THE1C LTR MaLR 1 375 0 1563 137 140 17 chr5 118586595 118586787 -81043363 - MER44D DNA MER2_type -1974 517 3 1656 167 39 0 chr5 118586850 118587132 -81043018 + AluJb SINE Alu 1 293 -19 1552 221 73 39 chr5 118587222 118587535 -81042615 + MSTD LTR MaLR 1 331 -65 1457 119 14 9 chr5 118587535 118587753 -81042397 - AluSq SINE Alu -50 263 45 1552 221 73 39 chr5 118587753 118587820 -81042330 + MSTD LTR MaLR 331 394 -2 243 0 0 0 chr5 118587889 118587916 -81042234 + (T)n Simple_repeat Simple_repeat 1 27 0 962 215 168 43 chr5 118587966 118588118 -81042032 - AluJb SINE Alu -13 289 157 2207 99 0 14 chr5 118588118 118588412 -81041738 + AluSx SINE Alu 1 290 -22 962 215 168 43 chr5 118588412 118588515 -81041635 - AluJb SINE Alu -145 157 2 483 231 202 0 chr5 118588672 118588845 -81041305 - HAL1 LINE L1 -206 2301 2094 310 277 0 0 chr5 118588850 118588933 -81041217 + MER5A DNA MER1_type 9 91 -98 2197 126 7 0 chr5 118588965 118589275 -81040875 - AluSq SINE Alu -1 312 1 1573 244 169 34 chr5 118589278 118589990 -81040160 - HAL1 LINE L1 -587 1920 1061 2317 102 0 0 chr5 118589990 118590295 -81039855 - AluSx SINE Alu -7 305 1 1573 244 169 34 chr5 118590295 118590475 -81039675 - HAL1 LINE L1 -1446 1061 907 1922 141 3 13 chr5 118590530 118590828 -81039322 + AluJo SINE Alu 1 295 -17 665 131 10 20 chr5 118590846 118590945 -81039205 + AluJ/FLAM SINE Alu 2 99 -213 192 176 0 0 chr5 118590979 118591013 -81039137 + MER5B DNA MER1_type 1 34 -144 631 261 11 22 chr5 118591041 118591221 -81038929 + MER5B DNA MER1_type 1 178 0 446 200 148 30 chr5 118591255 118591390 -81038760 + MER5A DNA MER1_type 1 151 -38 2298 91 3 3 chr5 118591429 118591727 -81038423 - AluSx SINE Alu -14 298 1 1873 127 10 14 chr5 118592006 118592297 -81037853 - AluJb SINE Alu -1 311 22 2212 67 46 3 chr5 118592415 118592698 -81037452 + AluY SINE Alu 1 295 -16 279 0 0 0 chr5 118594633 118594664 -81035486 + (TG)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr5 118595122 118595150 -81035000 + AT_rich Low_complexity Low_complexity 1 28 0 527 163 16 108 chr5 118596050 118596158 -81033992 + MER2 DNA MER2_type 23 120 -225 2328 73 0 11 chr5 118596158 118596468 -81033682 - AluY SINE Alu 0 307 1 527 163 16 108 chr5 118596468 118596487 -81033663 + MER2 DNA MER2_type 120 139 -206 713 167 0 35 chr5 118596490 118596604 -81033546 + FLAM_C SINE Alu 2 111 -32 341 154 64 39 chr5 118596629 118596707 -81033443 + MER2 DNA MER2_type 131 210 -135 708 209 0 22 chr5 118596823 118596957 -81033193 + FLAM_C SINE Alu 3 133 0 2191 134 0 0 chr5 118597541 118597846 -81032304 + AluSx SINE Alu 1 305 -7 5512 253 128 93 chr5 118598097 118598466 -81031684 + L2 LINE L2 234 589 -2725 1756 164 7 23 chr5 118598466 118598765 -81031385 - AluJb SINE Alu -18 294 1 5512 253 128 93 chr5 118598765 118599274 -81030876 + L2 LINE L2 589 1079 -2235 622 206 30 15 chr5 118599274 118599405 -81030745 + MER58B DNA MER1_type 195 327 -14 5512 253 128 93 chr5 118599405 118600945 -81029205 + L2 LINE L2 1079 2871 -443 1384 169 47 47 chr5 118601024 118601325 -81028825 - AluJb SINE Alu -8 304 4 463 265 63 67 chr5 118601374 118601642 -81028508 + L2 LINE L2 3047 3313 0 1063 151 39 44 chr5 118605080 118605285 -81024865 - AluJo SINE Alu -22 290 87 694 191 0 44 chr5 118605383 118605467 -81024683 + FLAM_A SINE Alu 1 78 -233 2497 125 8 40 chr5 118605467 118605843 -81024307 + THE1B LTR MaLR 1 364 0 694 191 0 44 chr5 118605843 118605894 -81024256 + FLAM_A SINE Alu 78 130 -181 341 261 80 43 chr5 118605921 118606109 -81024041 + L1M4 LINE L1 2200 2394 -3752 31 0 0 0 chr5 118606200 118606231 -81023919 + AT_rich Low_complexity Low_complexity 1 31 0 1435 171 17 60 chr5 118606355 118606473 -81023677 + AluJb SINE Alu 14 136 -176 2320 98 0 0 chr5 118606473 118606770 -81023380 - AluSx SINE Alu -15 297 1 1435 171 17 60 chr5 118606770 118606949 -81023201 + AluJb SINE Alu 136 298 -14 1802 162 0 39 chr5 118607013 118607321 -81022829 - AluJb SINE Alu -16 296 1 405 261 72 22 chr5 118607384 118607522 -81022628 + MIR SINE MIR 3 147 -115 347 223 43 32 chr5 118607593 118607687 -81022463 + LTR40a LTR ERVL 410 504 -15 2275 118 0 0 chr5 118607712 118608016 -81022134 - AluSx SINE Alu -8 304 1 412 190 293 5 chr5 118608016 118608221 -81021929 - MER20B DNA MER1_type -39 744 481 258 333 37 0 chr5 118608561 118608696 -81021454 + GA-rich Low_complexity Low_complexity 4 143 0 213 39 0 0 chr5 118609738 118609764 -81020386 + (A)n Simple_repeat Simple_repeat 1 26 0 2171 125 0 0 chr5 118609771 118610059 -81020091 + AluSx SINE Alu 1 288 -24 2149 98 19 13 chr5 118610752 118611059 -81019091 - AluSc SINE Alu 0 309 1 2330 89 0 7 chr5 118611600 118611902 -81018248 + AluSc SINE Alu 1 300 -9 2086 113 6 29 chr5 118612886 118613197 -81016953 + AluSq SINE Alu 6 309 -4 2197 85 18 0 chr5 118613297 118613579 -81016571 + AluSg SINE Alu 1 287 -23 476 246 151 44 chr5 118613624 118613876 -81016274 + L1ME4a LINE L1 5688 5966 -155 396 0 0 0 chr5 118613995 118614039 -81016111 + (CA)n Simple_repeat Simple_repeat 1 44 0 298 268 71 9 chr5 118614039 118614151 -81015999 + L2 LINE L2 3195 3313 0 2238 118 0 0 chr5 118614420 118614724 -81015426 + AluSx SINE Alu 1 304 -8 1061 157 35 0 chr5 118615726 118615898 -81014252 - AluJo SINE Alu -16 296 119 710 194 0 22 chr5 118615942 118616076 -81014074 - AluJo SINE Alu -169 143 13 411 250 142 107 chr5 118616154 118616414 -81013736 - L1MC/D LINE L1 -321 5800 5550 1188 168 59 0 chr5 118616414 118616634 -81013516 - MER46A DNA MER2_type -3 233 1 411 250 142 107 chr5 118616634 118616849 -81013301 - L1MC/D LINE L1 -571 5550 5292 330 320 104 31 chr5 118616859 118617081 -81013069 - L1MC/D LINE L1 -873 5273 5036 2065 126 7 10 chr5 118617480 118617781 -81012369 - AluSx SINE Alu -12 300 1 2125 121 0 10 chr5 118618071 118618368 -81011782 + AluSx SINE Alu 3 296 -16 1577 100 0 0 chr5 118618428 118618628 -81011522 + AluSg/x SINE Alu 104 303 -7 449 182 0 0 chr5 118618775 118618852 -81011298 + FRAM/FAM SINE Alu 1 69 -107 340 84 6 0 chr5 118618855 118618910 -81011240 - Alu SINE Alu 0 308 259 1570 74 28 0 chr5 118620015 118620231 -81009919 + L1PB1 LINE L1 5929 6150 -1 1579 164 27 4 chr5 118620485 118620741 -81009409 - AluJo SINE Alu -17 295 34 24 32 0 0 chr5 118621022 118621053 -81009097 + AT_rich Low_complexity Low_complexity 1 31 0 491 245 125 0 chr5 118621249 118621433 -81008717 + MER112 DNA MER1_type 1 207 -53 2417 84 0 0 chr5 118621900 118622199 -81007951 + AluSq SINE Alu 1 299 -14 2417 72 7 0 chr5 118622345 118622638 -81007512 - AluSp SINE Alu -18 295 1 523 144 119 51 chr5 118624089 118624207 -81005943 + FLAM_C SINE Alu 2 127 -16 2515 73 3 0 chr5 118624899 118625200 -81004950 + AluSq SINE Alu 6 307 -6 2177 99 0 7 chr5 118625210 118625504 -81004646 + AluSx SINE Alu 1 292 -20 194 306 12 12 chr5 118625547 118625632 -81004518 + MIR SINE MIR 28 112 -150 1570 74 28 0 chr5 118627298 118627514 -81002636 + L1PB1 LINE L1 5929 6150 -1 1579 164 27 4 chr5 118627768 118628024 -81002126 - AluJo SINE Alu -17 295 34 24 32 0 0 chr5 118628305 118628336 -81001814 + AT_rich Low_complexity Low_complexity 1 31 0 497 232 124 5 chr5 118628532 118628717 -81001433 + MER112 DNA MER1_type 1 207 -53 2471 90 0 0 chr5 118629184 118629496 -81000654 + AluSx SINE Alu 1 312 0 216 0 0 0 chr5 118629547 118629571 -81000579 + (ATTG)n Simple_repeat Simple_repeat 4 27 0 1884 154 0 7 chr5 118629571 118629851 -81000299 - AluJb SINE Alu -32 280 3 377 301 86 21 chr5 118630095 118630281 -80999869 - MIR SINE MIR -64 198 1 206 273 73 0 chr5 118630319 118630374 -80999776 + L2 LINE L2 3251 3309 -4 226 294 0 54 chr5 118630588 118630680 -80999470 + MER5A DNA MER1_type 18 104 -85 203 326 42 0 chr5 118631526 118631621 -80998529 - MIR3 SINE MIR 0 208 110 23 33 0 0 chr5 118631628 118631658 -80998492 + AT_rich Low_complexity Low_complexity 1 30 0 328 219 177 0 chr5 118631692 118631800 -80998350 + L1ME4a LINE L1 5755 5885 -236 2353 96 6 6 chr5 118632017 118632330 -80997820 - AluSq SINE Alu 0 313 1 2171 65 3 96 chr5 118632460 118632782 -80997368 - AluY SINE Alu -19 292 1 21 0 0 0 chr5 118632791 118632812 -80997338 + AT_rich Low_complexity Low_complexity 1 21 0 662 254 87 0 chr5 118633088 118633273 -80996877 + MIR SINE MIR 58 258 -4 1169 155 0 48 chr5 118633887 118633951 -80996199 + L1MC1 LINE L1 6137 6203 -130 2271 113 3 0 chr5 118633951 118634253 -80995897 + AluSx SINE Alu 1 303 -9 1169 155 0 48 chr5 118634253 118634395 -80995755 + L1MC1 LINE L1 6203 6333 0 310 216 14 0 chr5 118634514 118634588 -80995562 + L2 LINE L2 2197 2271 -1043 742 241 19 91 chr5 118634711 118635018 -80995132 + MLT1L LTR MaLR 3 287 -328 270 273 189 14 chr5 118635986 118636129 -80994021 - MIR SINE MIR -5 257 90 2094 112 44 0 chr5 118636960 118637256 -80992894 + AluSq SINE Alu 1 309 -4 408 62 31 52 chr5 118637259 118637356 -80992794 + (GAAA)n Simple_repeat Simple_repeat 4 98 0 750 122 0 46 chr5 118637361 118637492 -80992658 + AluJb SINE Alu 184 308 -4 226 276 43 43 chr5 118637712 118637828 -80992322 + MIR3 SINE MIR 85 200 -8 219 36 0 0 chr5 118637837 118637865 -80992285 + (TG)n Simple_repeat Simple_repeat 1 28 0 1311 147 58 18 chr5 118637867 118638091 -80992059 + AluJb SINE Alu 70 302 -10 583 115 11 0 chr5 118638091 118638178 -80991972 - AluSc SINE Alu -52 257 170 1274 175 92 4 chr5 118638187 118638416 -80991734 - AluJb SINE Alu -23 289 41 23 33 0 0 chr5 118639794 118639824 -80990326 + AT_rich Low_complexity Low_complexity 1 30 0 900 242 14 5 chr5 118640639 118640850 -80989300 + MIR SINE MIR 3 215 -47 477 207 0 0 chr5 118641055 118641142 -80989008 - AluJ/FLAM SINE Alu -224 88 2 297 200 73 64 chr5 118641234 118641344 -80988806 + MIR3 SINE MIR 82 192 -16 1474 161 60 4 chr5 118641670 118641937 -80988213 + L1MB7 LINE L1 5886 6167 -17 228 273 186 20 chr5 118642531 118642784 -80987366 + L2 LINE L2 2678 2972 -342 241 397 43 0 chr5 118642885 118643001 -80987149 + L2 LINE L2 3151 3271 -1 2116 158 5 42 chr5 118643080 118643192 -80986958 + MLT1A1 LTR MaLR 1 116 -249 1971 124 0 63 chr5 118643192 118643507 -80986643 + AluSx SINE Alu 1 295 -17 2116 158 5 42 chr5 118643507 118643773 -80986377 + MLT1A1 LTR MaLR 116 365 0 21 57 0 0 chr5 118645655 118645690 -80984460 + GC_rich Low_complexity Low_complexity 1 35 0 33 43 0 0 chr5 118646240 118646287 -80983863 + GC_rich Low_complexity Low_complexity 1 47 0 799 269 144 55 chr5 118647361 118647630 -80982520 + L2 LINE L2 2637 2880 -433 868 181 8 129 chr5 118647630 118647878 -80982272 + MER20 DNA MER1_type 1 218 -1 799 269 144 55 chr5 118647878 118648041 -80982109 + L2 LINE L2 2880 3027 -286 1701 147 39 14 chr5 118648041 118648326 -80981824 - AluJb SINE Alu -12 300 9 799 269 144 55 chr5 118648326 118648494 -80981656 + L2 LINE L2 3027 3313 0 401 256 146 18 chr5 118648515 118648679 -80981471 - MIR SINE MIR -32 230 46 1859 147 9 129 chr5 118648701 118648883 -80981267 + MLT1B LTR MaLR 1 203 -187 2310 90 3 0 chr5 118648883 118649173 -80980977 + AluY SINE Alu 1 291 -20 1859 147 9 129 chr5 118649173 118649366 -80980784 + MLT1B LTR MaLR 203 318 -72 1857 184 0 0 chr5 118649366 118649671 -80980479 - AluSx SINE Alu -7 305 1 1859 147 9 129 chr5 118649671 118649737 -80980413 + MLT1B LTR MaLR 318 390 0 2126 113 10 3 chr5 118649864 118650155 -80979995 - AluSx SINE Alu -14 298 6 1916 163 10 3 chr5 118650163 118650469 -80979681 - AluJb SINE Alu -4 308 1 25 0 0 0 chr5 118650483 118650508 -80979642 + AT_rich Low_complexity Low_complexity 1 25 0 830 232 0 12 chr5 118650660 118650828 -80979322 - FRAM SINE Alu 0 166 1 869 257 29 21 chr5 118650929 118651170 -80978980 + MIR SINE MIR 2 244 -18 2077 155 0 0 chr5 118651207 118651517 -80978633 - AluJb SINE Alu -2 310 1 1984 102 0 29 chr5 118651832 118652106 -80978044 - AluY SINE Alu -45 266 1 2332 88 0 3 chr5 118652893 118653198 -80976952 + AluY SINE Alu 2 305 -6 1203 193 167 7 chr5 118653551 118653820 -80976330 + AluJb SINE Alu 1 312 0 1409 167 51 126 chr5 118653839 118654244 -80975906 - MLT1D LTR MaLR 0 505 150 2389 87 0 26 chr5 118654244 118654553 -80975597 - AluSg SINE Alu -9 301 1 1409 167 51 126 chr5 118654553 118654693 -80975457 - MLT1D LTR MaLR -355 150 1 568 231 111 10 chr5 118654808 118655007 -80975143 + MIR SINE MIR 6 224 -38 278 122 0 0 chr5 118656004 118656045 -80974105 + U2 snRNA snRNA 1 41 -147 2074 137 3 3 chr5 118656088 118656388 -80973762 - AluSx SINE Alu -12 300 1 279 0 0 0 chr5 118657223 118657254 -80972896 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 292 235 128 10 chr5 118657254 118657347 -80972803 - L2 LINE L2 -9 3304 3197 2442 139 11 8 chr5 118657996 118658370 -80971780 - THE1C LTR MaLR 0 375 1 2183 120 0 3 chr5 118658915 118659207 -80970943 - AluSg SINE Alu -19 291 1 206 350 0 0 chr5 118659469 118659529 -80970621 - L2 LINE L2 0 3272 3213 1667 170 57 0 chr5 118659539 118659821 -80970329 - AluSx SINE Alu -14 298 1 2067 128 0 20 chr5 118659907 118660211 -80969939 - AluSx SINE Alu -14 298 1 984 185 72 148 chr5 118660548 118660617 -80969533 + MLT1A2 LTR MaLR 1 74 -300 2445 82 3 13 chr5 118660617 118660932 -80969218 + AluSp SINE Alu 1 312 -1 984 185 72 148 chr5 118660932 118661267 -80968883 + MLT1A2 LTR MaLR 74 374 0 309 218 68 13 chr5 118661629 118661772 -80968378 + L1ME LINE L1 5669 5823 -298 2912 16 0 6 chr5 118661805 118662125 -80968025 + AluYb8 SINE Alu 1 318 0 1310 158 0 9 chr5 118662284 118662499 -80967651 + AluJb SINE Alu 87 299 -13 2203 91 18 0 chr5 118662522 118662808 -80967342 - AluSp SINE Alu -22 291 1 1329 90 0 0 chr5 118662915 118663081 -80967069 - AluSg/x SINE Alu -28 281 116 319 97 3 3 chr5 118663082 118663137 -80967013 - Alu SINE Alu -256 47 2 204 40 0 0 chr5 118663153 118663178 -80966972 + (CA)n Simple_repeat Simple_repeat 1 25 0 1251 119 5 0 chr5 118663207 118663392 -80966758 - AluSg/x SINE Alu -8 301 116 377 43 0 0 chr5 118663394 118663441 -80966709 - AluY SINE Alu -253 47 1 21 0 0 0 chr5 118663477 118663498 -80966652 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 118663536 118663558 -80966592 + AT_rich Low_complexity Low_complexity 1 22 0 2120 77 0 0 chr5 118663560 118663821 -80966329 + AluY SINE Alu 43 303 -8 2066 137 0 0 chr5 118663954 118664232 -80965918 - AluJb SINE Alu -34 278 1 221 266 8 28 chr5 118665241 118665331 -80964819 + CT-rich Low_complexity Low_complexity 1 88 0 303 218 158 0 chr5 118665470 118665571 -80964579 + L2 LINE L2 3133 3249 -64 766 224 118 45 chr5 118665757 118666088 -80964062 - L1MC5 LINE L1 -433 7528 7174 2156 121 3 7 chr5 118666381 118666687 -80963463 + AluSq SINE Alu 1 305 -8 2114 114 0 0 chr5 118667238 118667518 -80962632 - AluSx SINE Alu -21 291 12 1921 181 0 0 chr5 118667587 118667897 -80962253 + AluJb SINE Alu 1 310 -2 1486 127 13 9 chr5 118667911 118668140 -80962010 + L1MA2 LINE L1 1004 1233 -6332 186 0 88 0 chr5 118668141 118668175 -80961975 + T-rich Low_complexity Low_complexity 1 37 0 2099 63 4 0 chr5 118668181 118668436 -80961714 - AluY SINE Alu -55 256 1 2017 134 0 0 chr5 118668448 118668763 -80961387 - AluSx SINE Alu 0 315 1 964 124 0 0 chr5 118668770 118668899 -80961251 - AluSq/x SINE Alu -183 129 1 7727 139 43 48 chr5 118668899 118670758 -80959392 + L1MA2 LINE L1 5312 7179 -544 250 186 136 0 chr5 118670758 118670817 -80959333 + MER67C LTR ERV1 499 565 -145 7727 139 43 48 chr5 118670817 118670927 -80959223 + L1MA2 LINE L1 7179 7288 -435 2081 119 7 0 chr5 118670927 118671205 -80958945 + AluSx SINE Alu 1 280 -32 7727 139 43 48 chr5 118671205 118671598 -80958552 + L1MA2 LINE L1 7288 7722 -1 763 284 68 17 chr5 118671929 118672292 -80957858 + L1MC4a LINE L1 5499 5768 -394 38 39 0 0 chr5 118672355 118672407 -80957743 + AT_rich Low_complexity Low_complexity 1 52 0 2232 123 0 0 chr5 118672768 118673070 -80957080 + AluSx SINE Alu 1 302 -10 1710 130 59 0 chr5 118673370 118673609 -80956541 + AluJb SINE Alu 1 253 -59 1002 104 0 22 chr5 118674318 118674453 -80955697 - FLAM_C SINE Alu -1 132 1 332 280 148 11 chr5 118674455 118674637 -80955513 + L1ME LINE L1 5585 5791 -330 2361 75 0 0 chr5 118674643 118674936 -80955214 - AluY SINE Alu -18 293 1 1893 131 49 26 chr5 118674944 118675249 -80954901 - AluSx SINE Alu 0 312 1 1855 165 3 19 chr5 118675305 118675620 -80954530 - AluJb SINE Alu 0 312 3 536 252 216 42 chr5 118675623 118675956 -80954194 + MLT1I LTR MaLR 18 408 -1 592 97 45 28 chr5 118675991 118676167 -80953983 + (TA)n Simple_repeat Simple_repeat 2 180 0 1983 198 50 45 chr5 118676210 118676404 -80953746 + L1MC4 LINE L1 7524 7715 -327 2234 116 0 0 chr5 118676404 118676696 -80953454 + AluSc SINE Alu 1 292 -17 1983 198 50 45 chr5 118676696 118677016 -80953134 + L1MC4 LINE L1 7715 8041 -1 406 184 0 0 chr5 118677192 118677268 -80952882 + MLT1F LTR MaLR 467 542 0 322 351 26 26 chr5 118677544 118677735 -80952415 + L1MEd LINE L1 1037 1227 -4892 1675 188 0 3 chr5 118677765 118678068 -80952082 - AluJb SINE Alu 0 302 1 10608 24 3 156 chr5 118678110 118679727 -80950423 + SVA Other Other 8 1377 -9 291 338 23 23 chr5 118679772 118679991 -80950159 + HAL1b LINE L1 309 527 -821 470 221 49 8 chr5 118680084 118680206 -80949944 - LTR68 LTR ERV1 -606 134 8 486 304 59 69 chr5 118680371 118680416 -80949734 + L1MC4a LINE L1 5555 5599 -2209 2047 154 0 0 chr5 118680416 118680727 -80949423 - AluSx SINE Alu -1 311 1 486 304 59 69 chr5 118680727 118681072 -80949078 + L1MC4a LINE L1 5599 5941 -1867 657 82 0 0 chr5 118681748 118681833 -80948317 + AluY SINE Alu 213 297 -14 502 206 17 109 chr5 118682960 118683135 -80947015 - MLT1K LTR MaLR 0 588 430 645 257 23 37 chr5 118683185 118683399 -80946751 - MLT1K LTR MaLR -152 436 226 466 118 29 0 chr5 118683406 118683474 -80946676 - AluS SINE Alu -11 300 231 1617 81 0 19 chr5 118683503 118683742 -80946408 - AluSg/x SINE Alu 0 310 76 1972 136 31 0 chr5 118683746 118684040 -80946110 - AluSx SINE Alu -9 303 1 558 239 56 56 chr5 118684804 118684984 -80945166 - MLT1J LTR MaLR 0 511 332 297 293 40 47 chr5 118685017 118685167 -80944983 - MLT1J LTR MaLR -263 248 100 905 154 53 75 chr5 118685602 118685829 -80944321 + L1MD1 LINE L1 6021 6242 0 707 146 139 0 chr5 118685843 118685980 -80944170 - FAM SINE Alu -19 166 11 249 194 0 148 chr5 118686031 118686067 -80944083 - AluJo/FRAM SINE Alu 0 302 262 2220 102 0 26 chr5 118686067 118686372 -80943778 + AluSx SINE Alu 1 297 -15 249 194 0 148 chr5 118686372 118686443 -80943707 - AluJo/FRAM SINE Alu -40 262 211 339 239 60 8 chr5 118686664 118686781 -80943369 - L1MC5 LINE L1 -107 7854 7732 2161 165 26 93 chr5 118686965 118687436 -80942714 + MLT1D LTR MaLR 1 433 -72 2131 122 7 3 chr5 118687436 118687731 -80942419 - AluSx SINE Alu -16 296 1 2161 165 26 93 chr5 118687731 118687797 -80942353 + MLT1D LTR MaLR 433 502 -3 2217 126 7 0 chr5 118688410 118688719 -80941431 + AluSx SINE Alu 1 311 -1 2321 100 0 0 chr5 118688972 118689271 -80940879 - AluSg SINE Alu -11 299 1 220 219 44 26 chr5 118689443 118689557 -80940593 + (TA)n Simple_repeat Simple_repeat 1 116 0 1526 191 14 3 chr5 118689690 118689978 -80940172 - AluJo SINE Alu -21 291 1 484 322 156 24 chr5 118690091 118690295 -80939855 - L2 LINE L2 0 3313 3137 1772 138 33 11 chr5 118690295 118690601 -80939549 - AluSx SINE Alu 0 312 1 484 322 156 24 chr5 118690601 118690931 -80939219 - L2 LINE L2 -176 3137 2705 416 154 187 130 chr5 118690935 118691058 -80939092 - FLAM_A SINE Alu 0 133 4 1758 163 6 49 chr5 118691090 118691228 -80938922 + AluJo SINE Alu 1 143 -169 1942 131 0 70 chr5 118691228 118691557 -80938593 + AluSq SINE Alu 5 310 -3 1758 163 6 49 chr5 118691557 118691743 -80938407 + AluJo SINE Alu 143 311 -1 1226 208 0 56 chr5 118691753 118692037 -80938113 - AluJo SINE Alu -44 268 1 972 279 7 17 chr5 118692038 118692336 -80937814 - L2 LINE L2 -618 2696 2402 2153 209 120 58 chr5 118692425 118692582 -80937568 + MER76 LTR ERV 1 147 -541 2041 161 45 9 chr5 118692582 118692918 -80937232 + MER7A DNA MER2_type 1 346 0 2153 209 120 58 chr5 118692918 118692991 -80937159 + MER76 LTR ERV 147 214 -474 1912 159 0 7 chr5 118692991 118693293 -80936857 - AluJb SINE Alu -12 300 1 2153 209 120 58 chr5 118693293 118693687 -80936463 + MER76 LTR ERV 214 665 -23 4620 160 47 91 chr5 118694127 118694233 -80935917 - MER45B DNA AcHobo -541 1040 931 439 226 137 0 chr5 118694233 118694335 -80935815 + FLAM_C SINE Alu 2 117 -16 4620 160 47 91 chr5 118694335 118694543 -80935607 - MER45B DNA AcHobo -650 931 715 2356 110 3 0 chr5 118694543 118694851 -80935299 - AluSc SINE Alu 0 309 1 4620 160 47 91 chr5 118694851 118695623 -80934527 - MER45B DNA AcHobo -866 715 1 663 289 177 25 chr5 118695739 118696061 -80934089 - MLT1J2 LTR MaLR -56 394 24 2958 80 8 3 chr5 118696062 118696424 -80933726 + THE1B LTR MaLR 1 364 0 2219 97 0 0 chr5 118696652 118696942 -80933208 - AluY SINE Alu -2 309 20 1409 158 92 26 chr5 118697238 118697510 -80932640 + AluJo SINE Alu 1 290 -22 2338 134 110 10 chr5 118697698 118698108 -80932042 - LTR32 LTR ERVL -13 458 8 1885 223 61 7 chr5 118698642 118699051 -80931099 + LTR16C LTR ERVL 60 490 -1 1202 227 133 60 chr5 118699141 118699644 -80930506 + HAL1 LINE L1 649 1188 -1319 2306 94 0 0 chr5 118701894 118702201 -80927949 - AluSg1 SINE Alu -2 307 1 375 305 75 28 chr5 118702203 118702416 -80927734 - MIR SINE MIR -20 242 20 229 253 103 72 chr5 118704616 118704810 -80925340 - HAL1 LINE L1 -16 2491 2292 1344 169 93 43 chr5 118704956 118705235 -80924915 - AluJo SINE Alu -19 293 1 2003 111 24 7 chr5 118705697 118705994 -80924156 - AluSq SINE Alu -11 302 1 453 298 126 11 chr5 118706221 118706483 -80923667 - HAL1 LINE L1 -607 1900 1609 348 242 286 0 chr5 118707349 118707440 -80922710 - FLAM_A SINE Alu -16 117 1 1205 229 100 104 chr5 118707490 118708131 -80922019 + HAL1 LINE L1 1305 1942 -565 26 30 0 0 chr5 118708597 118708630 -80921520 + AT_rich Low_complexity Low_complexity 1 33 0 198 0 0 0 chr5 118708630 118708652 -80921498 + (TA)n Simple_repeat Simple_repeat 2 23 0 1038 169 29 6 chr5 118708652 118708824 -80921326 - AluJo SINE Alu -28 284 109 302 232 53 32 chr5 118708858 118708953 -80921197 - MARNA DNA Mariner -249 337 241 224 157 0 20 chr5 118710064 118710115 -80920035 + (TAA)n Simple_repeat Simple_repeat 1 50 0 1607 172 13 20 chr5 118710258 118710561 -80919589 - AluJo SINE Alu -9 303 3 1713 174 0 14 chr5 118710646 118710940 -80919210 + AluSx SINE Alu 5 294 -18 1609 152 7 71 chr5 118711398 118711695 -80918455 - AluSx SINE Alu -30 282 5 580 208 54 31 chr5 118711719 118711849 -80918301 - FLAM_A SINE Alu 0 133 1 2454 66 0 31 chr5 118712126 118712444 -80917706 + AluY SINE Alu 1 308 -3 385 266 156 36 chr5 118713138 118713330 -80916820 + MIR SINE MIR 41 255 -7 210 194 60 45 chr5 118713461 118713528 -80916622 - L2 LINE L2 -456 2858 2791 381 277 147 38 chr5 118713687 118713925 -80916225 - L2 LINE L2 -627 2687 2424 320 280 21 0 chr5 118713925 118714018 -80916132 + MIR SINE MIR 119 213 -49 511 296 0 0 chr5 118714136 118714268 -80915882 + MIR SINE MIR 19 150 -112 880 141 0 0 chr5 118714546 118714667 -80915483 - FLAM_C SINE Alu -22 121 1 350 140 0 0 chr5 118715852 118715909 -80914241 - AluS SINE Alu -245 57 1 2205 90 40 3 chr5 118717278 118717579 -80912571 + AluSp SINE Alu 1 312 -1 210 118 0 0 chr5 118717761 118717795 -80912355 + (TG)n Simple_repeat Simple_repeat 2 35 0 240 35 0 0 chr5 118717880 118717909 -80912241 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 620 186 0 0 chr5 118717920 118718022 -80912128 - AluJ/FLAM SINE Alu -210 102 1 190 236 164 0 chr5 118718022 118718077 -80912073 + MIR3 SINE MIR 116 179 -29 2055 160 0 0 chr5 118718085 118718397 -80911753 - AluJo SINE Alu 0 312 1 189 378 51 31 chr5 118718631 118718729 -80911421 + MIR SINE MIR 19 118 -90 978 203 123 52 chr5 118719725 118720074 -80910076 - MLT1A2 LTR MaLR 0 374 1 1220 156 42 4 chr5 118720753 118721186 -80908964 - LTR54 LTR ERV1 0 510 1 2430 86 0 16 chr5 118721523 118721838 -80908312 - AluSg SINE Alu 0 310 1 270 295 114 0 chr5 118722419 118722524 -80907626 + L2 LINE L2 3192 3308 -5 868 244 26 65 chr5 118722626 118723008 -80907142 - L1MC4 LINE L1 -91 7951 7585 2146 106 10 7 chr5 118723249 118723552 -80906598 - AluSp SINE Alu -9 304 1 1575 176 6 66 chr5 118723552 118723704 -80906446 - AluJb SINE Alu -12 300 175 2380 109 0 0 chr5 118723704 118724017 -80906133 + AluSq SINE Alu 1 313 0 1575 176 6 66 chr5 118724017 118724183 -80905967 - AluJb SINE Alu -137 175 1 586 139 0 0 chr5 118724205 118724291 -80905859 - AluJ/FLAM SINE Alu -224 88 3 273 29 0 0 chr5 118724325 118724359 -80905791 + (CA)n Simple_repeat Simple_repeat 2 35 0 2239 114 0 0 chr5 118726066 118726365 -80903785 + AluSx SINE Alu 1 299 -13 1693 180 7 10 chr5 118726443 118726748 -80903402 - AluJo SINE Alu -8 304 1 470 210 30 30 chr5 118727073 118727173 -80902977 - AluS SINE Alu -213 100 1 1005 170 0 0 chr5 118727348 118727507 -80902643 + AluJb SINE Alu 129 287 -25 551 221 132 7 chr5 118727645 118727781 -80902369 - L2 LINE L2 0 3313 3161 787 228 109 37 chr5 118728428 118728722 -80901428 - L1ME LINE L1 -388 5782 5468 29 0 0 0 chr5 118728735 118728764 -80901386 + AT_rich Low_complexity Low_complexity 1 29 0 2112 99 14 17 chr5 118728772 118729066 -80901084 + AluSq SINE Alu 1 293 -20 216 67 0 0 chr5 118729066 118729096 -80901054 + (TG)n Simple_repeat Simple_repeat 2 31 0 4095 140 84 43 chr5 118729096 118729779 -80900371 + L1MB4 LINE L1 5137 5879 -301 1592 157 73 17 chr5 118729779 118730066 -80900084 + AluJb SINE Alu 3 305 -7 4095 140 84 43 chr5 118730066 118730382 -80899768 + L1MB4 LINE L1 5879 6180 0 23 0 0 0 chr5 118730541 118730564 -80899586 + AT_rich Low_complexity Low_complexity 1 23 0 1871 145 24 17 chr5 118730777 118731066 -80899084 + AluSx SINE Alu 1 291 -21 1976 131 10 13 chr5 118731311 118731623 -80898527 - AluY SINE Alu 0 311 1 2182 88 3 14 chr5 118732776 118733071 -80897079 - AluSc SINE Alu -17 292 1 244 305 8 0 chr5 118733089 118733207 -80896943 + L1MC/D LINE L1 4540 4658 -1488 357 298 176 12 chr5 118733266 118733511 -80896639 + L1MC/D LINE L1 5332 5616 -2192 1050 229 96 18 chr5 118733842 118733961 -80896189 - AluJo SINE Alu 0 302 194 1808 161 3 45 chr5 118733961 118734272 -80895878 - AluJb SINE Alu -14 298 1 1050 229 96 18 chr5 118734272 118734432 -80895718 - AluJo SINE Alu -108 194 1 336 175 12 50 chr5 118735102 118735182 -80894968 + LTR49 LTR ERV1 447 523 -72 1273 184 22 11 chr5 118735628 118735899 -80894251 - L1 LINE L1 -987 5159 4886 1145 180 30 5 chr5 118736089 118736289 -80893861 + AluJo SINE Alu 85 289 -23 2309 116 0 0 chr5 118736558 118736868 -80893282 - AluSg SINE Alu 0 310 1 1775 68 5 0 chr5 118740767 118740987 -80889163 - AluSp SINE Alu -12 301 81 219 152 0 0 chr5 118741738 118741784 -80888366 + (TA)n Simple_repeat Simple_repeat 2 47 0 2127 92 40 20 chr5 118745025 118745329 -80884821 + AluSg SINE Alu 1 310 0 24 32 0 0 chr5 118748795 118748826 -80881324 + AT_rich Low_complexity Low_complexity 1 31 0 1734 102 128 8 chr5 118749272 118749537 -80880613 + AluSg1 SINE Alu 1 297 -12 999 177 192 15 chr5 118752121 118752454 -80877696 + Charlie1 DNA MER1_type 2351 2742 -19 264 221 128 12 chr5 118752508 118752594 -80877556 + MER103 DNA DNA 1 96 -70 260 242 11 33 chr5 118753818 118753909 -80876241 + L2 LINE L2 3142 3230 -42 347 342 0 0 chr5 118754040 118754157 -80875993 + L1MC/D LINE L1 5542 5658 -2150 1804 169 14 3 chr5 118754323 118754618 -80875532 + AluJb SINE Alu 1 298 -14 2345 86 10 0 chr5 118756055 118756357 -80873793 + AluSp SINE Alu 1 305 -8 590 129 92 80 chr5 118756359 118756522 -80873628 + Charlie5 DNA MER1_type 2421 2585 -27 4060 77 20 2 chr5 118756544 118757088 -80873062 + MER41A LTR ERV1 1 554 0 239 232 35 21 chr5 118757110 118757198 -80872952 - MER5A DNA MER1_type -81 108 9 1707 153 0 48 chr5 118757830 118758124 -80872026 - AluJb SINE Alu -30 282 3 623 294 210 59 chr5 118758581 118759480 -80870670 + L2 LINE L2 1782 2816 -498 251 225 124 0 chr5 118759570 118759659 -80870491 + L2 LINE L2 2969 3068 -245 425 226 158 23 chr5 118759843 118759939 -80870211 - MIR SINE MIR -43 219 137 2187 131 0 6 chr5 118759939 118760252 -80869898 - AluSx SINE Alu -1 311 1 425 226 158 23 chr5 118760252 118760332 -80869818 - MIR SINE MIR -125 137 19 1970 145 0 3 chr5 118761325 118761614 -80868536 + AluJb SINE Alu 1 288 -24 1512 133 79 32 chr5 118762078 118762357 -80867793 - AluJb SINE Alu -13 299 8 2117 115 13 13 chr5 118762364 118762668 -80867482 - AluSx SINE Alu -8 304 1 1988 137 3 3 chr5 118763698 118763998 -80866152 - AluSx SINE Alu -12 300 1 2261 103 0 31 chr5 118764135 118764456 -80865694 - AluSx SINE Alu -1 311 1 2234 108 20 7 chr5 118764822 118765128 -80865022 - AluSx SINE Alu -2 310 1 22 0 0 0 chr5 118765130 118765152 -80864998 + AT_rich Low_complexity Low_complexity 1 22 0 808 153 8 0 chr5 118765162 118765280 -80864870 + AluJb SINE Alu 171 289 -23 243 0 0 0 chr5 118765330 118765357 -80864793 + (A)n Simple_repeat Simple_repeat 1 27 0 1016 207 87 55 chr5 118765426 118765493 -80864657 - MSTD LTR MaLR -2 394 331 1457 119 14 9 chr5 118765493 118765711 -80864439 + AluSq SINE Alu 45 263 -50 1016 207 87 55 chr5 118765711 118765918 -80864232 - MSTD LTR MaLR -65 331 111 471 319 98 23 chr5 118766482 118766748 -80863402 - LTR67 LTR ERVL -270 287 2 2141 101 0 4 chr5 118767636 118767912 -80862238 - AluSx SINE Alu -37 275 1 476 179 21 21 chr5 118767975 118768070 -80862080 + AluJ/FLAM SINE Alu 1 95 -217 335 282 51 8 chr5 118768078 118768195 -80861955 + GA-rich Low_complexity Low_complexity 3 124 0 838 270 64 44 chr5 118768872 118769340 -80860810 + L1ME LINE L1 5293 5772 -349 406 277 149 20 chr5 118769368 118769563 -80860587 + MIR SINE MIR 29 248 -14 286 244 77 39 chr5 118769616 118769694 -80860456 - L2 LINE L2 -37 3276 3196 332 357 63 16 chr5 118769762 118770118 -80860032 + L2 LINE L2 2644 3057 -215 2132 112 11 0 chr5 118770333 118770619 -80859531 - AluSc SINE Alu -20 289 1 1056 193 66 5 chr5 118770654 118770866 -80859284 + AluJo SINE Alu 2 226 -86 228 298 122 15 chr5 118772216 118772347 -80857803 - MER5A DNA MER1_type -2 187 43 256 350 52 0 chr5 118772385 118772482 -80857668 + L2 LINE L2 3151 3252 -20 307 247 135 0 chr5 118773227 118773316 -80856834 + MARNA DNA Mariner 462 562 -24 260 237 82 62 chr5 118773229 118773326 -80856824 - MARNA DNA Mariner -465 121 23 * 1857 128 3 20 chr5 118773579 118773877 -80856273 + AluY SINE Alu 4 296 -15 230 156 47 31 chr5 118774680 118774744 -80855406 - L1ME LINE L1 -5955 115 51 2115 107 3 7 chr5 118775035 118775335 -80854815 + AluSc SINE Alu 1 299 -10 863 266 64 43 chr5 118775413 118775740 -80854410 + MER21B LTR ERV1 397 730 -133 232 278 28 83 chr5 118775750 118775858 -80854292 + MER21B LTR ERV1 570 671 -192 450 297 163 32 chr5 118776232 118776748 -80853402 + L2 LINE L2 2722 3302 -11 1138 189 26 108 chr5 118776908 118777207 -80852943 - AluJb SINE Alu 0 324 52 2303 116 3 0 chr5 118777207 118777508 -80852642 + AluSx SINE Alu 1 302 -10 1138 189 26 108 chr5 118777508 118777557 -80852593 - AluJb SINE Alu -272 52 1 26 30 0 0 chr5 118777753 118777786 -80852364 + AT_rich Low_complexity Low_complexity 1 33 0 419 200 0 0 chr5 118778229 118778294 -80851856 + AluS SINE Alu 2 66 -246 285 298 32 0 chr5 118778704 118778798 -80851352 - L1MC4a LINE L1 -1879 5929 5833 1623 124 80 25 chr5 118778821 118779095 -80851055 - AluJb SINE Alu -16 296 8 2109 115 13 13 chr5 118779102 118779406 -80850744 - AluSx SINE Alu -8 304 1 455 216 166 0 chr5 118780439 118780638 -80849512 - AluSg/x SINE Alu -15 297 66 1588 239 109 9 chr5 118780791 118781242 -80848908 + MLT1F1 LTR MaLR 69 564 -3 1657 121 0 0 chr5 118781964 118782187 -80847963 - AluSx SINE Alu -29 283 61 685 321 103 66 chr5 118782230 118782984 -80847166 + L2 LINE L2 1016 1814 -1500 2198 91 14 0 chr5 118782984 118783269 -80846881 - AluSc SINE Alu -20 289 1 685 321 103 66 chr5 118783269 118783467 -80846683 + L2 LINE L2 1814 2003 -1311 248 339 0 0 chr5 118783542 118783598 -80846552 + polypyrimidine Low_complexity Low_complexity 4 59 0 1231 192 23 102 chr5 118792806 118793197 -80836953 - MLT1A2 LTR MaLR -4 370 11 358 216 85 85 chr5 118794193 118794229 -80835921 - L1MC5 LINE L1 -45 7916 7881 2342 106 0 0 chr5 118794229 118794530 -80835620 + AluSx SINE Alu 1 301 -11 358 216 85 85 chr5 118794530 118794646 -80835504 - L1MC5 LINE L1 -79 7882 7764 242 256 139 0 chr5 118794636 118794722 -80835428 - L1ME2 LINE L1 -10 6154 6057 * 3084 163 68 15 chr5 118795455 118796109 -80834041 - Tigger7 DNA MER2_type -22 2565 1 403 223 0 121 chr5 118796109 118796266 -80833884 + MER112 DNA MER1_type 122 259 -1 217 250 92 26 chr5 118796910 118796986 -80833164 - MIR SINE MIR -52 210 130 960 132 0 22 chr5 118797088 118797224 -80832926 + FLAM_C SINE Alu 1 133 0 274 208 0 0 chr5 118797330 118797378 -80832772 + LTR16A LTR ERVL 1 48 -402 21230 131 39 16 chr5 118797381 118800769 -80829381 + L1MA3 LINE L1 10 3472 -4093 15208 158 13 7 chr5 118800872 118804643 -80825507 + L1MA3 LINE L1 3930 7724 0 767 273 97 77 chr5 118804679 118804895 -80825255 + LTR16A LTR ERVL 40 269 -181 1538 214 47 100 chr5 118804895 118805424 -80824726 + MLT1D LTR MaLR 3 503 -2 767 273 97 77 chr5 118805424 118805610 -80824540 + LTR16A LTR ERVL 269 450 0 30 27 0 0 chr5 118805644 118805681 -80824469 + AT_rich Low_complexity Low_complexity 1 37 0 1790 191 55 14 chr5 118805833 118806200 -80823950 + MSTD LTR MaLR 15 396 0 1760 96 92 29 chr5 118806645 118806926 -80823224 - AluSx SINE Alu -13 299 1 36 70 0 0 chr5 118807935 118808006 -80822144 + AT_rich Low_complexity Low_complexity 1 71 0 2268 156 103 5 chr5 118808097 118808487 -80821663 - MSTC LTR MaLR 0 428 1 5952 249 89 40 chr5 118808487 118808786 -80821364 - MSTC-int LTR MaLR 0 1735 1452 2846 7 0 3 chr5 118808786 118809095 -80821055 - AluYa5 SINE Alu -3 308 1 5952 249 89 40 chr5 118809095 118810448 -80819702 - MSTC-int LTR MaLR -283 1452 1 1823 120 65 4 chr5 118810450 118810725 -80819425 - MSTC LTR MaLR -1 427 136 928 245 202 62 chr5 118810865 118811350 -80818800 - MLT1H1 LTR MaLR 0 555 3 477 297 87 0 chr5 118811453 118811591 -80818559 + MIR SINE MIR 6 155 -107 396 292 17 8 chr5 118811583 118811703 -80818447 - MIR SINE MIR 0 262 142 * 371 163 0 12 chr5 118812523 118812609 -80817541 + (CGG)n Simple_repeat Simple_repeat 2 86 0 25 0 0 0 chr5 118813763 118813788 -80816362 + AT_rich Low_complexity Low_complexity 1 25 0 2015 123 7 0 chr5 118814080 118814373 -80815777 - AluSx SINE Alu -16 296 2 436 314 72 55 chr5 118815191 118815595 -80814555 - MLT1J LTR MaLR -90 421 11 657 325 37 27 chr5 118816243 118816541 -80813609 + L2 LINE L2 3010 3310 -3 3809 93 0 127 chr5 118816645 118817298 -80812852 - L1PA13 LINE L1 -6 6157 5588 22 56 0 0 chr5 118817304 118817340 -80812810 + AT_rich Low_complexity Low_complexity 1 36 0 280 160 96 21 chr5 118817354 118817448 -80812702 - L1ME4a LINE L1 -13 6108 6008 2976 200 34 30 chr5 118817502 118818268 -80811882 + L1M4 LINE L1 4483 5251 -895 35376 28 2 0 chr5 118818410 118823325 -80806825 + L1PA4 LINE L1 1230 6152 -3 1008 115 0 0 chr5 118823430 118823569 -80806581 + AluSg/x SINE Alu 155 293 -17 458 287 85 22 chr5 118823608 118824146 -80806004 - L1ME4a LINE L1 -748 5398 4973 1113 275 123 13 chr5 118824766 118825273 -80804877 - L2 LINE L2 -5 3308 2759 1446 310 92 52 chr5 118825295 118826363 -80803787 + L2 LINE L2 1789 2898 -416 636 241 43 19 chr5 118826578 118826740 -80803410 + L2 LINE L2 3107 3272 0 216 0 0 0 chr5 118827742 118827766 -80802384 + (T)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr5 118827800 118827828 -80802322 + AT_rich Low_complexity Low_complexity 1 28 0 862 165 34 51 chr5 118827831 118828007 -80802143 - AluJo SINE Alu -23 289 117 490 145 58 116 chr5 118828055 118828227 -80801923 + MIR SINE MIR 48 209 -53 1439 190 4 11 chr5 118828230 118828493 -80801657 - AluJo SINE Alu -10 302 42 468 192 125 54 chr5 118828586 118828748 -80801402 - MER5A DNA MER1_type 0 189 4 297 0 0 0 chr5 118829652 118829685 -80800465 + (TG)n Simple_repeat Simple_repeat 2 34 0 2241 97 0 17 chr5 118829959 118830259 -80799891 - AluY SINE Alu -16 295 1 414 0 0 0 chr5 118830331 118830377 -80799773 + (CA)n Simple_repeat Simple_repeat 1 46 0 5832 99 109 123 chr5 118830963 118832548 -80797602 - pTR5 LTR ERV1 0 2438 743 1232 162 28 85 chr5 118832592 118832674 -80797476 + MER46A DNA MER2_type 2 87 -2644 418 19 0 19 chr5 118832674 118832728 -80797422 + L1PA6 LINE L1 6102 6154 0 1232 162 28 85 chr5 118832728 118832740 -80797410 + MER46A DNA MER2_type 87 98 -2633 2204 82 0 49 chr5 118832740 118833045 -80797105 + AluY SINE Alu 1 290 -21 1232 162 28 85 chr5 118833045 118833196 -80796954 + MER46A DNA MER2_type 98 234 -2 21 0 0 0 chr5 118833410 118833431 -80796719 + AT_rich Low_complexity Low_complexity 1 21 0 362 207 35 86 chr5 118833539 118833623 -80796527 + MIR SINE MIR 74 152 -110 933 258 55 27 chr5 118833623 118833952 -80796198 + MER46C DNA MER2_type 1 338 0 362 207 35 86 chr5 118833952 118833983 -80796167 + MIR SINE MIR 152 183 -79 240 291 21 85 chr5 118834058 118834199 -80795951 - L2 LINE L2 -2 3311 3180 1594 152 0 0 chr5 118835106 118835343 -80794807 + AluJo SINE Alu 1 237 -75 2228 99 3 3 chr5 118835388 118835682 -80794468 - AluSp SINE Alu -19 294 1 200 143 24 0 chr5 118836188 118836230 -80793920 + (TG)n Simple_repeat Simple_repeat 2 44 0 182 263 0 53 chr5 118836753 118836810 -80793340 + L2 LINE L2 2609 2662 -652 774 218 141 105 chr5 118836820 118836843 -80793307 + MLT1H LTR MaLR 3 24 -525 2344 149 22 14 chr5 118836843 118837205 -80792945 - MLT1A1 LTR MaLR 0 365 1 774 218 141 105 chr5 118837205 118837705 -80792445 + MLT1H LTR MaLR 24 545 -4 184 310 17 0 chr5 118837707 118837765 -80792385 + MIR SINE MIR 76 134 -74 2144 80 62 0 chr5 118837782 118838058 -80792092 - AluSp SINE Alu -20 293 1 199 250 0 62 chr5 118838058 118838122 -80792028 + MIR SINE MIR 120 179 -83 252 305 121 21 chr5 118840150 118840291 -80789859 - L3b LINE CR1 -297 1286 1132 407 145 0 0 chr5 118841934 118841996 -80788154 + MIR3 SINE MIR 126 187 -21 23 54 0 0 chr5 118842056 118842093 -80788057 + AT_rich Low_complexity Low_complexity 1 37 0 1755 97 31 23 chr5 118842538 118842797 -80787353 - L1PA16 LINE L1 -2 6164 5904 5763 172 38 16 chr5 118842797 118844282 -80785868 - L1PA16 LINE L1 -528 5638 4126 438 223 122 36 chr5 118844493 118844632 -80785518 + MIR SINE MIR 41 191 -71 680 297 24 19 chr5 118845262 118845366 -80784784 + MER58C DNA MER1_type 1 103 -2317 1858 131 33 0 chr5 118845366 118845488 -80784662 + AluSx SINE Alu 1 118 -194 297 0 0 0 chr5 118845488 118845521 -80784629 + (CA)n Simple_repeat Simple_repeat 2 34 0 1858 131 33 0 chr5 118845521 118845673 -80784477 + AluSx SINE Alu 118 284 -28 12520 76 19 12 chr5 118845675 118848002 -80782148 + L1PA7 LINE L1 3811 6147 -7 680 297 24 19 chr5 118848002 118848106 -80782044 + MER58C DNA MER1_type 103 213 -2 1971 118 0 14 chr5 118848150 118848455 -80781695 - AluSx SINE Alu 0 306 6 237 241 0 19 chr5 118848705 118848759 -80781391 + CT-rich Low_complexity Low_complexity 1 53 0 197 287 20 0 chr5 118848860 118848961 -80781189 + CT-rich Low_complexity Low_complexity 3 105 0 473 337 140 0 chr5 118849134 118849413 -80780737 - L2 LINE L2 -422 2892 2575 691 155 5 176 chr5 118849453 118849646 -80780504 + FRAM SINE Alu 3 162 -4 540 322 11 0 chr5 118849663 118849840 -80780310 - MIR SINE MIR 0 262 84 228 260 21 52 chr5 118851088 118851184 -80778966 - MIR SINE MIR -152 110 18 272 301 37 59 chr5 118851278 118851414 -80778736 - MIR3 SINE MIR -34 174 42 3768 157 136 15 chr5 118852425 118853202 -80776948 - MER4D LTR ERV1 -32 871 1 225 226 32 0 chr5 118853908 118853970 -80776180 + LTR33 LTR ERVL 41 104 -417 422 227 159 15 chr5 118856820 118856952 -80773198 + MIR SINE MIR 1 151 -111 564 299 34 11 chr5 118856975 118857152 -80772998 - MIR SINE MIR -65 197 17 2288 77 6 52 chr5 118857164 118857345 -80772805 - AluSg SINE Alu -1 309 148 2212 107 0 0 chr5 118857345 118857658 -80772492 - AluSc SINE Alu 0 309 1 2288 77 6 52 chr5 118857658 118857800 -80772350 - AluSg SINE Alu -162 148 1 854 136 38 0 chr5 118857965 118858097 -80772053 + MLT1C LTR MaLR 30 166 -301 847 225 0 6 chr5 118858095 118858268 -80771882 + MLT1C LTR MaLR 296 467 0 * 1356 207 71 60 chr5 118860026 118860408 -80769742 - MLT1B LTR MaLR -4 386 1 1028 297 46 14 chr5 118860832 118861179 -80768971 - LTR16A LTR ERVL -67 383 26 237 188 104 0 chr5 118863050 118863098 -80767052 - L1ME LINE L1 -309 5812 5760 580 280 103 60 chr5 118863674 118863974 -80766176 - HAL1 LINE L1 -12 2495 2183 274 266 25 0 chr5 118864004 118864083 -80766067 + MLT1J LTR MaLR 418 498 -13 2133 263 75 76 chr5 118864087 118864794 -80765356 - HAL1 LINE L1 -758 1749 1043 2015 140 7 0 chr5 118864794 118865079 -80765071 - AluSx SINE Alu -23 289 3 2133 263 75 76 chr5 118865079 118865328 -80764822 - HAL1 LINE L1 -1464 1043 795 549 0 0 0 chr5 118865328 118865389 -80764761 + (TG)n Simple_repeat Simple_repeat 2 62 0 2133 263 75 76 chr5 118865389 118865845 -80764305 - HAL1 LINE L1 -1712 795 314 2730 211 78 5 chr5 118865988 118866591 -80763559 + MER82 DNA MER2_type 1 647 -6 1745 170 17 112 chr5 118866956 118867438 -80762712 - MER63B DNA MER1_type 0 436 1 2213 108 3 7 chr5 118868196 118868502 -80761648 + AluSx SINE Alu 1 305 -7 28 71 0 0 chr5 118869308 118869364 -80760786 + AT_rich Low_complexity Low_complexity 1 56 0 183 100 0 0 chr5 118869456 118869486 -80760664 + (TTTTTA)n Simple_repeat Simple_repeat 1 30 0 3746 20 0 2 chr5 118869486 118869926 -80760224 - L1PA4 LINE L1 -1 6154 5716 519 154 0 126 chr5 118869928 118870028 -80760122 - L1MB7 LINE L1 -47 6137 6059 1687 127 15 106 chr5 118870028 118870367 -80759783 + AluJo SINE Alu 5 312 0 519 154 0 126 chr5 118870367 118870409 -80759741 - L1MB7 LINE L1 -125 6059 6013 490 130 0 43 chr5 118870417 118870509 -80759641 - L1MB7 LINE L1 -529 5655 5568 312 70 0 0 chr5 118870802 118870845 -80759305 + (ATG)n Simple_repeat Simple_repeat 2 44 0 465 298 82 0 chr5 118870850 118871021 -80759129 - MIR SINE MIR -12 250 66 186 143 0 0 chr5 118871207 118871242 -80758908 + (T)n Simple_repeat Simple_repeat 1 35 0 354 38 0 19 chr5 118871243 118871296 -80758854 - L1PA4 LINE L1 -1 6154 6103 1987 134 0 14 chr5 118871572 118871856 -80758294 - AluJb SINE Alu -15 297 18 2304 91 3 3 chr5 118872254 118872551 -80757599 + AluSc SINE Alu 2 298 -11 246 297 0 0 chr5 118872900 118872964 -80757186 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 1060 169 18 0 chr5 118873082 118873248 -80756902 - FAM SINE Alu -6 169 1 661 69 0 0 chr5 118873332 118873419 -80756731 + L1PA6 LINE L1 10 96 -6365 * 31216 68 3 8 chr5 118873417 118877825 -80752325 + L1PA6 LINE L1 1162 5544 -917 6926 62 5 2 chr5 118878014 118878905 -80751245 + L1PA6 LINE L1 5569 6461 -8 228 211 0 0 chr5 118878980 118879032 -80751118 - AluJ/monomer SINE Alu -250 52 1 21 36 0 0 chr5 118879148 118879176 -80750974 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 118879621 118879642 -80750508 + AT_rich Low_complexity Low_complexity 1 21 0 1879 170 0 0 chr5 118879873 118880162 -80749988 + AluJb SINE Alu 4 292 -20 660 236 137 0 chr5 118880804 118880965 -80749185 - MER5A DNA MER1_type -2 187 5 360 225 108 63 chr5 118881528 118881639 -80748511 + MIR SINE MIR 36 151 -57 1542 131 0 4 chr5 118881641 118881885 -80748265 + L1PA8 LINE L1 5922 6164 -8 215 246 215 0 chr5 118882263 118882328 -80747822 + MIR SINE MIR 37 115 -147 21 0 0 0 chr5 118882378 118882399 -80747751 + AT_rich Low_complexity Low_complexity 1 21 0 1823 135 15 68 chr5 118883690 118884015 -80746135 - AluJo SINE Alu -4 308 1 755 279 74 32 chr5 118884677 118884989 -80745161 - L1MC4a LINE L1 -1908 5900 5576 2243 121 0 3 chr5 118885356 118885662 -80744488 + AluSx SINE Alu 1 305 -7 247 134 183 207 chr5 118886395 118886559 -80743591 + MER5C DNA MER1_type 1 160 -164 659 112 0 0 chr5 118886604 118886693 -80743457 + FRAM SINE Alu 41 129 -47 1759 142 17 37 chr5 118887069 118887211 -80742939 + AluJo SINE Alu 1 144 -168 2561 47 0 0 chr5 118887211 118887512 -80742638 - AluY SINE Alu -10 301 1 1759 142 17 37 chr5 118887512 118887664 -80742486 + AluJo SINE Alu 144 289 -23 35 54 0 0 chr5 118887667 118887723 -80742427 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr5 118887735 118887758 -80742392 + AT_rich Low_complexity Low_complexity 1 23 0 267 294 29 0 chr5 118888726 118888794 -80741356 - L2 LINE L2 0 3272 3203 190 309 0 0 chr5 118888845 118888900 -80741250 + MIR SINE MIR 171 225 -37 2406 99 0 0 chr5 118889100 118889412 -80740738 + AluSx SINE Alu 1 312 0 2389 75 3 3 chr5 118890017 118890322 -80739828 - AluY SINE Alu -6 305 1 805 135 104 83 chr5 118890416 118890608 -80739542 + MER3 DNA MER1_type 14 209 0 5578 131 17 1 chr5 118890729 118891946 -80738204 - L1PA16 LINE L1 -53 6113 4882 537 290 0 8 chr5 118892691 118892815 -80737335 - L2 LINE L2 -4 3309 3187 1602 162 7 22 chr5 118892905 118893176 -80736974 - AluSx SINE Alu -45 267 1 1991 156 7 0 chr5 118893179 118893480 -80736670 - AluJo SINE Alu -9 303 1 250 192 14 199 chr5 118893564 118893710 -80736440 - MER5B DNA MER1_type -29 149 31 2530 73 147 10 chr5 118893792 118894201 -80735949 - MER4C LTR ERV1 0 465 1 264 339 113 0 chr5 118894374 118894489 -80735661 - L2 LINE L2 0 3313 3186 1030 209 19 0 chr5 118894493 118894704 -80735446 - MER58A DNA MER1_type -9 215 1 431 338 163 40 chr5 118894793 118895630 -80734520 - L2 LINE L2 -192 3080 2125 250 282 122 23 chr5 118895891 118896022 -80734128 + L1ME LINE L1 5524 5667 -454 309 302 50 50 chr5 118896478 118896680 -80733470 - L1ME3A LINE L1 -224 5946 5745 723 254 12 0 chr5 118896681 118896850 -80733300 + MIR SINE MIR 92 262 0 547 272 90 79 chr5 118896895 118897270 -80732880 - L1ME3A LINE L1 -461 5709 5322 1010 158 18 0 chr5 118897270 118897441 -80732709 - FAM SINE Alu -1 174 1 547 272 90 79 chr5 118897441 118897510 -80732640 - L1ME3A LINE L1 -848 5322 5255 423 272 25 114 chr5 118897569 118897790 -80732360 - HAL1 LINE L1 -2 2505 2321 1757 168 3 33 chr5 118897790 118898093 -80732057 - AluJo SINE Alu -18 294 1 423 272 25 114 chr5 118898093 118898195 -80731955 - HAL1 LINE L1 -186 2321 2211 696 208 66 31 chr5 118900035 118900261 -80729889 - MLT1H LTR MaLR -272 277 44 269 276 171 46 chr5 118900615 118900734 -80729416 + MIR SINE MIR 6 149 -113 2641 146 22 5 chr5 118900734 118901151 -80728999 - MSTB LTR MaLR -2 424 1 269 276 171 46 chr5 118901151 118901183 -80728967 + MIR SINE MIR 149 176 -86 649 206 8 0 chr5 118901677 118901803 -80728347 - MIR SINE MIR 0 262 136 245 235 0 12 chr5 118902701 118902782 -80727368 + (TA)n Simple_repeat Simple_repeat 2 81 0 4205 175 57 8 chr5 118904375 118905333 -80724817 + L1MB7 LINE L1 5172 6175 -9 2451 81 0 7 chr5 118905341 118905648 -80724502 - AluSg SINE Alu -5 305 1 27 0 0 0 chr5 118905675 118905702 -80724448 + AT_rich Low_complexity Low_complexity 1 27 0 1049 187 118 116 chr5 118905748 118906028 -80724122 - HsTC2 DNA Tc2 -2 1896 1618 1849 157 7 7 chr5 118906028 118906334 -80723816 + AluJb SINE Alu 1 306 -6 1049 187 118 116 chr5 118906334 118906562 -80723588 - HsTC2 DNA Tc2 -280 1618 1211 1749 199 56 20 chr5 118907645 118908093 -80722057 - L1ME1 LINE L1 -23 6143 5680 1268 298 64 13 chr5 118908432 118908896 -80721254 + L2 LINE L2 2242 2729 -585 230 308 158 8 chr5 118908896 118909029 -80721121 + MIR3 SINE MIR 1 153 -55 761 196 146 14 chr5 118909095 118909376 -80720774 - L1MEc LINE L1 -5454 942 625 726 305 62 0 chr5 118909426 118909718 -80720432 - L1MEc LINE L1 -6026 370 61 24 32 0 0 chr5 118909793 118909824 -80720326 + AT_rich Low_complexity Low_complexity 1 31 0 505 270 102 20 chr5 118909916 118910112 -80720038 - MIR SINE MIR -2 260 49 1173 165 37 16 chr5 118910179 118910421 -80719729 - L1MB8 LINE L1 -3 6175 5929 2151 214 25 6 chr5 118910434 118910984 -80719166 - L1MB8 LINE L1 -1020 5126 4566 256 264 47 66 chr5 118912007 118912113 -80718037 + MIR SINE MIR 33 136 -72 1761 201 0 0 chr5 118912499 118912808 -80717342 - AluJo SINE Alu -3 309 1 21 0 0 0 chr5 118912943 118912964 -80717186 + AT_rich Low_complexity Low_complexity 1 21 0 183 307 253 47 chr5 118912972 118913122 -80717028 + L2 LINE L2 3091 3271 -1 21454 35 3 2 chr5 118913750 118916774 -80713376 + L1P LINE L1 13 3039 -3107 1794 125 61 27 chr5 118917163 118917460 -80712690 - AluJb SINE Alu -5 307 1 192 40 0 0 chr5 118917472 118917497 -80712653 + (T)n Simple_repeat Simple_repeat 1 25 0 2200 113 7 7 chr5 118917979 118918281 -80711869 + AluJb SINE Alu 2 303 -9 2195 85 0 0 chr5 118919263 118919544 -80710606 - AluY SINE Alu -30 281 1 353 218 68 54 chr5 118920158 118920305 -80709845 - L1ME4a LINE L1 -5 6116 5968 225 213 21 0 chr5 118920450 118920497 -80709653 + L2 LINE L2 3224 3271 -1 702 280 136 9 chr5 118920970 118921184 -80708966 + MIR SINE MIR 12 252 -10 1718 163 64 3 chr5 118921297 118921580 -80708570 + AluJo SINE Alu 1 300 -12 1345 313 165 27 chr5 118921741 118922044 -80708106 + L2 LINE L2 1818 2078 -1235 1874 159 7 7 chr5 118922044 118922345 -80707805 - AluJb SINE Alu -11 301 1 1345 313 165 27 chr5 118922345 118923324 -80706826 + L2 LINE L2 2078 3300 -13 243 0 0 0 chr5 118923324 118923351 -80706799 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 434 256 30 0 chr5 118923886 118924019 -80706131 + MER103 DNA DNA 24 160 -6 333 353 40 25 chr5 118924296 118924497 -80705653 + MIR SINE MIR 58 261 -1 1048 307 82 13 chr5 118926697 118927160 -80702990 - MLT1K LTR MaLR -91 497 3 297 0 0 0 chr5 118927244 118927277 -80702873 + (TG)n Simple_repeat Simple_repeat 2 34 0 1329 210 59 80 chr5 118927941 118928417 -80701733 + MLT1H LTR MaLR 71 536 -13 273 263 0 0 chr5 118928559 118928616 -80701534 + (TA)n Simple_repeat Simple_repeat 1 57 0 331 311 0 0 chr5 118928616 118928706 -80701444 + L1MC4 LINE L1 6614 6703 -1339 * 343 239 12 56 chr5 118928656 118928818 -80701332 - L1MC4 LINE L1 -1339 6983 1959 443 214 72 156 chr5 118929596 118929959 -80700191 + LTR37B LTR ERV1 6 329 -139 755 219 71 0 chr5 118929959 118930114 -80700036 - FRAM SINE Alu 0 166 1 443 214 72 156 chr5 118930114 118930181 -80699969 + LTR37B LTR ERV1 329 400 -68 916 206 11 0 chr5 118930198 118930373 -80699777 + FRAM SINE Alu 1 175 -1 2075 95 7 7 chr5 118930606 118930928 -80699222 + AluSq SINE Alu 1 322 0 343 350 86 0 chr5 118930963 118931103 -80699047 - MIR3 SINE MIR -22 186 35 1064 208 136 12 chr5 118932201 118932566 -80697584 - MER57A LTR ERV1 0 403 9 489 219 0 0 chr5 118933043 118933162 -80696988 + (TATG)n Simple_repeat Simple_repeat 2 120 0 506 367 61 4 chr5 118933329 118933558 -80696592 - MIR SINE MIR -8 254 13 228 341 0 35 chr5 118934245 118934330 -80695820 - MIR SINE MIR -3 259 178 608 75 0 0 chr5 118934686 118934766 -80695384 + MADE1 DNA Mariner 1 80 0 261 0 0 0 chr5 118935052 118935081 -80695069 + (TA)n Simple_repeat Simple_repeat 1 29 0 2288 98 3 0 chr5 118935081 118935378 -80694772 - AluSx SINE Alu -14 298 1 1027 196 101 46 chr5 118935998 118936344 -80693806 + MLT1A1 LTR MaLR 1 365 0 1817 151 16 40 chr5 118937503 118937807 -80692343 + AluJo SINE Alu 1 297 -15 266 252 99 0 chr5 118938118 118938249 -80691901 + L1ME4a LINE L1 5951 6094 -27 29 0 0 0 chr5 118938295 118938324 -80691826 + AT_rich Low_complexity Low_complexity 1 29 0 843 221 0 0 chr5 118938745 118938903 -80691247 - FAM SINE Alu -17 158 1 289 312 116 37 chr5 118938907 118939267 -80690883 + L2 LINE L2 2691 3079 -193 2791 184 33 4 chr5 118939291 118939812 -80690338 - MLT1F LTR MaLR 0 542 7 321 288 0 0 chr5 118939898 118939964 -80690186 + L2 LINE L2 3203 3268 -4 588 203 153 68 chr5 118940447 118940511 -80689639 + MER5A DNA MER1_type 13 70 -119 2311 114 0 0 chr5 118940511 118940819 -80689331 + AluSx SINE Alu 1 308 -4 588 203 153 68 chr5 118940819 118940917 -80689233 + MER5A DNA MER1_type 70 189 0 1008 278 64 29 chr5 118943132 118943476 -80686674 - MER113 DNA MER1_type? -5 516 186 1797 174 3 13 chr5 118943476 118943780 -80686370 + AluJb SINE Alu 1 301 -11 1008 278 64 29 chr5 118943780 118943799 -80686351 - MER113 DNA MER1_type? -335 186 169 2861 66 11 0 chr5 118943799 118944177 -80685973 - L1PA13 LINE L1 -3 6160 5779 1008 278 64 29 chr5 118944177 118944294 -80685856 - MER113 DNA MER1_type? -352 169 18 440 286 8 23 chr5 118944314 118944447 -80685703 + MIR SINE MIR 29 159 -103 2342 90 3 0 chr5 118946364 118946663 -80683487 - AluSg SINE Alu -10 300 1 1793 160 0 33 chr5 118946754 118947054 -80683096 - AluJb SINE Alu -22 290 1 2354 103 0 0 chr5 118947752 118948053 -80682097 + AluSx SINE Alu 1 301 -11 1935 144 7 0 chr5 118948522 118948843 -80681307 + AluJo SINE Alu 2 324 0 2154 87 10 14 chr5 118949263 118949575 -80680575 - AluSg SINE Alu 0 310 1 340 248 107 66 chr5 118949611 118949732 -80680418 + L2 LINE L2 3109 3234 -38 209 184 0 0 chr5 118949735 118949773 -80680377 + (TTCA)n Simple_repeat Simple_repeat 2 39 0 492 342 52 27 chr5 118949943 118950264 -80679886 + L2 LINE L2 2733 3057 -215 2149 118 3 14 chr5 118950352 118950512 -80679638 - AluSx SINE Alu -19 293 136 2274 103 0 0 chr5 118950512 118950814 -80679336 - AluSg SINE Alu -8 302 1 2149 118 3 14 chr5 118950814 118950949 -80679201 - AluSx SINE Alu -176 136 1 479 271 170 16 chr5 118951151 118951457 -80678693 - MLT1H LTR MaLR -196 353 1 713 209 13 26 chr5 118951504 118951657 -80678493 - FRAM SINE Alu -15 151 1 318 273 91 0 chr5 118951661 118951749 -80678401 + L2 LINE L2 3217 3312 -1 1048 213 51 113 chr5 118952142 118952531 -80677619 - MLT1A1 LTR MaLR 0 365 1 602 213 7 0 chr5 118952686 118952836 -80677314 + GA-rich Low_complexity Low_complexity 2 152 0 2769 133 7 74 chr5 118952866 118953446 -80676704 + L1PB3 LINE L1 5613 6153 -1 1460 160 83 31 chr5 118953734 118954095 -80676055 - AluJo SINE Alu 0 376 1 1346 181 0 5 chr5 118954445 118954661 -80675489 + AluJb SINE Alu 84 298 -14 4959 189 70 11 chr5 118954834 118956866 -80673284 + L1MB5 LINE L1 3999 6156 -18 227 359 110 8 chr5 118957071 118957316 -80672834 - L2 LINE L2 -814 2500 2231 2116 85 29 7 chr5 118958687 118958968 -80671182 + AluSx SINE Alu 7 293 -19 1541 301 96 36 chr5 118958968 118959832 -80670318 + L2 LINE L2 1788 2703 -611 1140 203 30 62 chr5 118959874 118960279 -80669871 - L1MC5 LINE L1 -81 7880 7489 505 222 42 65 chr5 118960428 118960644 -80669506 - L1MC5 LINE L1 -681 7280 7070 384 321 93 41 chr5 118960654 118961097 -80669053 + L2 LINE L2 2688 3154 -159 242 119 0 0 chr5 118961098 118961140 -80669010 - Alu SINE Alu -4 299 258 2391 83 3 0 chr5 118961150 118961452 -80668698 - AluSp SINE Alu -10 303 1 323 311 44 30 chr5 118961475 118961610 -80668540 + L2 LINE L2 3172 3308 -5 477 0 0 0 chr5 118963289 118963342 -80666808 + (T)n Simple_repeat Simple_repeat 1 53 0 23 0 0 0 chr5 118963470 118963493 -80666657 + GC_rich Low_complexity Low_complexity 1 23 0 246 167 233 56 chr5 118964522 118964612 -80665538 + MIR SINE MIR 84 189 -73 867 261 114 12 chr5 118964612 118965015 -80665135 + L1ME LINE L1 5368 5811 -351 326 182 61 0 chr5 118965340 118965406 -80664744 - MER113 DNA MER1_type? -208 313 244 1775 178 3 13 chr5 118965484 118965788 -80664362 + AluJb SINE Alu 1 301 -11 817 184 81 0 chr5 118966152 118966326 -80663824 - L1MB8 LINE L1 -3 6175 5988 2120 66 0 22 chr5 118966915 118967188 -80662962 + AluY SINE Alu 35 301 -10 511 194 0 0 chr5 118967188 118967291 -80662859 - L1 LINE L1 -1723 4423 4321 423 277 127 45 chr5 118967342 118967371 -80662779 - ERVL LTR ERVL -258 5506 5481 2054 141 0 3 chr5 118967371 118967677 -80662473 + AluSx SINE Alu 1 305 -7 423 277 127 45 chr5 118967677 118967914 -80662236 - ERVL LTR ERVL -283 5481 5218 879 53 147 0 chr5 118968234 118968424 -80661726 - L1P3 LINE L1 -559 5595 5378 687 290 52 29 chr5 118968733 118969040 -80661110 + ERVL LTR ERVL 1531 1844 -3920 1829 187 55 41 chr5 118969247 118969603 -80660547 - MLT1A2 LTR MaLR -4 370 26 1908 112 75 4 chr5 118969603 118969881 -80660269 + AluSx SINE Alu 1 298 -14 1829 187 55 41 chr5 118969881 118969898 -80660252 - MLT1A2 LTR MaLR -348 26 11 3432 158 42 49 chr5 118970209 118970544 -80659606 + L1MA4 LINE L1 3650 3986 -2160 1701 142 121 38 chr5 118970544 118970890 -80659260 + THE1C LTR MaLR 1 375 0 3432 158 42 49 chr5 118970890 118971312 -80658838 + L1MA4 LINE L1 3986 4402 -1744 22 35 0 0 chr5 118972055 118972084 -80658066 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 118973762 118973786 -80656364 + AT_rich Low_complexity Low_complexity 1 24 0 2241 115 3 3 chr5 118975150 118975463 -80654687 - AluSp SINE Alu 0 313 1 1843 115 8 0 chr5 118975610 118975870 -80654280 + AluSg SINE Alu 33 294 -16 4998 163 58 30 chr5 118975870 118975987 -80654163 + L1MA4 LINE L1 4434 4546 -1754 879 93 78 0 chr5 118975987 118976116 -80654034 - MER85 DNA T2_type 0 139 1 4998 163 58 30 chr5 118976116 118977808 -80652342 + L1MA4 LINE L1 4546 6300 0 1197 249 138 47 chr5 118977814 118978301 -80651849 + ERVL LTR ERVL 4847 5377 -387 229 182 0 0 chr5 118978325 118978380 -80651770 + L1MC4 LINE L1 6649 6703 -1339 230 156 0 0 chr5 118978407 118978452 -80651698 - LTR66 LTR ERVL -172 438 394 241 186 0 0 chr5 118978609 118978652 -80651498 - LTR10D LTR ERV1 0 513 471 29 60 0 0 chr5 118978682 118978732 -80651418 + AT_rich Low_complexity Low_complexity 1 50 0 724 159 23 30 chr5 118979765 118979896 -80650254 + MLT1A2 LTR MaLR 1 130 -244 1288 77 18 0 chr5 118979896 118980066 -80650084 - MSTB1 LTR MaLR 0 432 260 252 280 91 38 chr5 118980532 118980664 -80649486 + MIR3 SINE MIR 7 145 -63 279 227 0 40 chr5 118981450 118981525 -80648625 - MIR3 SINE MIR -46 162 91 1908 149 27 0 chr5 118981761 118982057 -80648093 + AluSx SINE Alu 1 304 -8 453 361 146 5 chr5 118982494 118982699 -80647451 + MIR SINE MIR 29 262 0 5887 65 1 1 chr5 118984946 118985687 -80644463 - L1PA7 LINE L1 -113 6041 5301 915 187 25 62 chr5 118985691 118985932 -80644218 + MLT1A2 LTR MaLR 143 374 0 6273 95 40 1 chr5 118987376 118988457 -80641693 + L1PA14 LINE L1 5041 6159 -2 847 164 0 27 chr5 118988461 118988607 -80641543 - Tigger2 DNA MER2_type -23 2695 2554 * 963 146 54 54 chr5 118988604 118988619 -80641531 - Tigger2 DNA MER2_type -2510 208 194 511 128 26 0 chr5 118988619 118988697 -80641453 + MADE1 DNA Mariner 1 80 0 963 146 54 54 chr5 118988697 118988886 -80641264 - Tigger2 DNA MER2_type -2523 195 4 341 309 56 45 chr5 118988923 118989057 -80641093 + MIR3 SINE MIR 63 201 -7 186 265 84 36 chr5 118990423 118990506 -80639644 - L3 LINE CR1 -1325 252 166 2129 156 21 6 chr5 118991706 118992062 -80638088 + MLT1A1 LTR MaLR 1 365 0 359 275 48 144 chr5 118995292 118995954 -80634196 + L2 LINE L2 2558 3178 -94 1834 106 120 14 chr5 118996617 118996892 -80633258 - AluSx SINE Alu -8 304 1 1801 144 0 38 chr5 118997085 118997398 -80632752 - AluJb SINE Alu -11 301 1 211 303 152 10 chr5 118997477 118997576 -80632574 - L2 LINE L2 -2 3270 3158 631 274 106 22 chr5 118997938 118998164 -80631986 + MIR SINE MIR 2 246 -16 823 179 71 58 chr5 118998292 118998532 -80631618 - L1MB7 LINE L1 -10 6174 5932 239 180 0 0 chr5 118998576 118998626 -80631524 - L1MA8 LINE L1 -239 6052 6003 204 268 18 0 chr5 118998790 118998846 -80631304 + L2 LINE L2 3190 3246 -67 769 239 26 84 chr5 118998900 118998966 -80631184 + MER102a DNA MER1_type 1 69 -1348 1897 117 48 0 chr5 118998966 118999239 -80630911 - AluY SINE Alu -25 286 1 769 239 26 84 chr5 118999239 118999519 -80630631 + MER102a DNA MER1_type 69 327 -3 1392 224 23 0 chr5 119001120 119001419 -80628731 - AluJo SINE Alu 0 312 7 2246 183 26 53 chr5 119002444 119002935 -80627215 + MLT1D LTR MaLR 21 498 -7 309 314 145 0 chr5 119003096 119003268 -80626882 - MIR SINE MIR -42 220 24 193 211 53 53 chr5 119003861 119003918 -80626232 + L2 LINE L2 3208 3264 -8 466 299 35 29 chr5 119006964 119007138 -80623012 + MIR SINE MIR 30 204 -58 1725 78 0 0 chr5 119008023 119008240 -80621910 - AluY SINE Alu 0 311 95 193 306 28 0 chr5 119008326 119008398 -80621752 - MIR SINE MIR -71 191 118 1339 168 0 43 chr5 119008399 119008631 -80621519 + AluSx SINE Alu 1 222 -90 931 108 13 45 chr5 119008820 119008977 -80621173 - MER20 DNA MER1_type -36 183 32 266 331 171 11 chr5 119009781 119010062 -80620088 - L3 LINE CR1 -409 1168 843 853 168 123 7 chr5 119011150 119011305 -80618845 + FRAM SINE Alu 1 172 -4 208 288 61 0 chr5 119011775 119011841 -80618309 + MIR SINE MIR 72 141 -121 228 321 127 6 chr5 119012011 119012176 -80617974 - L3 LINE CR1 -405 1172 988 180 77 0 0 chr5 119012492 119012518 -80617632 + (CA)n Simple_repeat Simple_repeat 1 26 0 201 318 16 0 chr5 119012961 119013024 -80617126 - L2 LINE L2 -6 3266 3203 818 148 0 0 chr5 119013169 119013291 -80616859 - AluSc SINE Alu -16 293 172 251 323 15 0 chr5 119013331 119013396 -80616754 + L2 LINE L2 3203 3268 -4 181 264 38 38 chr5 119014137 119014190 -80615960 - MIR SINE MIR -62 146 94 320 274 97 0 chr5 119014910 119015034 -80615116 - L1ME4a LINE L1 0 6121 5986 2391 46 0 0 chr5 119017118 119017400 -80612750 + L1P3 LINE L1 5400 5681 -473 641 126 0 11 chr5 119017400 119017487 -80612663 - AluSc SINE Alu -84 225 140 928 144 46 0 chr5 119017488 119017661 -80612489 + L1P LINE L1 5098 5278 -868 2908 170 13 92 chr5 119018505 119019106 -80611044 + MLT2B3 LTR ERVL 1 554 0 213 280 97 21 chr5 119020156 119020249 -80609901 + MIR SINE MIR 49 148 -60 243 316 120 8 chr5 119021589 119021706 -80608444 + L2 LINE L2 3143 3272 0 366 137 123 0 chr5 119023270 119023343 -80606807 + MER41B LTR ERV1 460 541 -94 588 14 0 0 chr5 119023343 119023412 -80606738 + (CA)n Simple_repeat Simple_repeat 2 70 0 196 270 170 0 chr5 119025123 119025223 -80604927 - MIR SINE MIR -65 197 81 408 177 46 0 chr5 119025809 119025903 -80604247 + MLT1E1 LTR MaLR 487 654 0 28 29 0 0 chr5 119028242 119028277 -80601873 + AT_rich Low_complexity Low_complexity 1 35 0 539 201 95 16 chr5 119028343 119028384 -80601766 + MLT1A2 LTR MaLR 212 248 -126 1780 148 68 4 chr5 119028384 119028662 -80601488 + AluJb SINE Alu 1 296 -16 539 201 95 16 chr5 119028662 119028791 -80601359 + MLT1A2 LTR MaLR 248 374 0 445 233 53 45 chr5 119029098 119029231 -80600919 + MER94 DNA DNA 1 134 0 235 327 63 31 chr5 119031393 119031552 -80598598 - MIR3 SINE MIR -10 198 35 4824 133 29 11 chr5 119032353 119033117 -80597033 - L1MA4A LINE L1 -5 6298 5521 1242 264 76 36 chr5 119033371 119033845 -80596305 + MLT1J LTR MaLR 13 505 -6 2316 209 91 6 chr5 119035306 119035813 -80594337 - MER44D DNA MER2_type 0 605 1 475 327 20 15 chr5 119036146 119036335 -80593815 - MIR SINE MIR -2 260 68 372 34 356 0 chr5 119036335 119036394 -80593756 - MADE1 DNA Mariner 0 80 1 372 200 21 32 chr5 119036993 119037088 -80593062 - MIR3 SINE MIR -7 201 108 22 35 0 0 chr5 119037466 119037495 -80592655 + AT_rich Low_complexity Low_complexity 1 29 0 719 269 65 14 chr5 119037979 119038195 -80591955 - MIR SINE MIR -24 238 12 459 0 0 0 chr5 119039216 119039267 -80590883 + (TG)n Simple_repeat Simple_repeat 2 52 0 388 276 62 28 chr5 119039929 119040074 -80590076 + MIR SINE MIR 89 238 -24 1794 172 0 7 chr5 119040093 119040389 -80589761 - AluJb SINE Alu -13 299 6 333 319 84 31 chr5 119041060 119041286 -80588864 + L2 LINE L2 3075 3312 -1 372 229 118 49 chr5 119041455 119041599 -80588551 + L1ME4a LINE L1 5955 6108 -13 532 288 219 23 chr5 119041720 119042154 -80587996 - L3 LINE CR1 -13 1564 1046 361 220 66 0 chr5 119042169 119042260 -80587890 - MIR SINE MIR -53 209 113 1951 103 18 11 chr5 119044981 119045253 -80584897 + AluSq SINE Alu 28 301 -12 246 297 173 22 chr5 119047517 119047702 -80582448 - L2 LINE L2 -615 2699 2487 804 147 14 42 chr5 119048057 119048200 -80581950 + FRAM SINE Alu 28 166 -10 24 0 0 0 chr5 119048376 119048400 -80581750 + AT_rich Low_complexity Low_complexity 1 24 0 406 134 60 0 chr5 119048438 119048505 -80581645 + Tigger4(Zombi) DNA MER2_type 2661 2731 0 2182 84 7 55 chr5 119048774 119049083 -80581067 - AluSg SINE Alu -14 296 3 198 0 0 0 chr5 119049083 119049105 -80581045 + (TC)n Simple_repeat Simple_repeat 2 23 0 414 263 62 44 chr5 119050283 119050443 -80579707 - MIR3 SINE MIR -43 165 3 401 222 108 125 chr5 119051406 119051749 -80578401 - MER102b DNA MER1_type -3 338 2 3395 111 54 42 chr5 119052170 119052691 -80577459 + MER1A DNA MER1_type 1 527 0 321 291 168 56 chr5 119053577 119053935 -80576215 + HAL1 LINE L1 828 1225 -1282 234 196 20 0 chr5 119053950 119054001 -80576149 + HAL1 LINE L1 1325 1376 -1131 471 282 220 15 chr5 119054100 119054373 -80575777 + HAL1 LINE L1 1540 1868 -639 2185 97 0 0 chr5 119054852 119055131 -80575019 + AluSq SINE Alu 27 305 -8 291 230 0 27 chr5 119055463 119055537 -80574613 + MLT1K LTR MaLR 517 588 0 413 241 95 0 chr5 119056226 119056342 -80573808 - L2 LINE L2 -1 3312 3186 296 275 0 0 chr5 119056569 119056649 -80573501 - L2 LINE L2 -923 2391 2312 283 300 67 13 chr5 119058105 119058255 -80571895 - MER112 DNA MER1_type -99 161 4 2122 144 15 30 chr5 119058287 119058626 -80571524 + MER1B DNA MER1_type 3 336 -1 990 83 53 0 chr5 119059641 119059773 -80570377 - MER85 DNA T2_type 0 139 1 3219 195 100 25 chr5 119060064 119060893 -80569257 - Charlie1 DNA MER1_type 0 2761 1871 1925 153 16 16 chr5 119061001 119061322 -80568828 - MER47A DNA MER2_type -10 356 36 242 200 43 29 chr5 119061322 119061392 -80568758 + L1ME4a LINE L1 5857 5927 -194 27 0 0 0 chr5 119062022 119062049 -80568101 + AT_rich Low_complexity Low_complexity 1 27 0 263 322 106 22 chr5 119062452 119062632 -80567518 - MIR SINE MIR -21 241 47 922 209 34 0 chr5 119062646 119062823 -80567327 - MER5A DNA MER1_type -1 188 6 1592 198 35 32 chr5 119064523 119064702 -80565448 + MER58B DNA MER1_type 2 184 -2236 2123 104 17 0 chr5 119064702 119064989 -80565161 + AluSx SINE Alu 1 292 -20 1592 198 35 32 chr5 119064989 119065148 -80565002 + MER58B DNA MER1_type 184 341 0 225 0 0 0 chr5 119066180 119066205 -80563945 + (CA)n Simple_repeat Simple_repeat 2 26 0 677 180 144 7 chr5 119066483 119066622 -80563528 - FRAM SINE Alu -8 158 1 183 42 0 0 chr5 119066739 119066763 -80563387 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 216 288 62 62 chr5 119067369 119067449 -80562701 - MIR SINE MIR -56 206 127 1299 174 184 0 chr5 119067530 119067824 -80562326 + L1MB8 LINE L1 5828 6175 -3 1533 203 108 38 chr5 119071536 119071906 -80558244 + MSTD LTR MaLR 1 396 0 314 185 92 0 chr5 119072107 119072172 -80557978 + MIR SINE MIR 63 133 -129 2164 114 0 3 chr5 119074299 119074597 -80555553 - AluSq SINE Alu -12 301 5 1310 148 15 17 chr5 119075547 119075824 -80554326 - MER2 DNA MER2_type -25 320 1 183 42 0 0 chr5 119075905 119075929 -80554221 + (T)n Simple_repeat Simple_repeat 1 24 0 1527 171 10 49 chr5 119076574 119076878 -80553272 - AluJb SINE Alu -20 292 1 2146 84 0 78 chr5 119077000 119077322 -80552828 + AluSx SINE Alu 1 297 -15 403 314 113 4 chr5 119077800 119078029 -80552121 + L2 LINE L2 2251 2504 -810 439 324 39 6 chr5 119078071 119078250 -80551900 + MIR SINE MIR 7 191 -71 323 326 98 62 chr5 119078272 119078689 -80551461 - L2 LINE L2 -22 3250 2819 237 304 136 16 chr5 119080497 119080622 -80549528 - L2 LINE L2 -195 3077 2938 443 310 51 25 chr5 119081865 119082076 -80548074 - MIR SINE MIR 0 262 50 1376 142 7 75 chr5 119083228 119083509 -80546641 + L1M3 LINE L1 5259 5520 -660 1986 119 63 39 chr5 119083729 119084091 -80546059 + Tigger2a DNA MER2_type 1 371 -63 875 190 61 0 chr5 119084092 119084255 -80545895 + AluJb SINE Alu 86 258 -54 202 313 16 0 chr5 119084551 119084615 -80545535 + MIR3 SINE MIR 109 173 -35 243 301 87 19 chr5 119085157 119085260 -80544890 + L2 LINE L2 1965 2074 -1240 1000 260 179 12 chr5 119085373 119085824 -80544326 + L2 LINE L2 2784 3309 -4 244 370 50 0 chr5 119085990 119086090 -80544060 - L2 LINE L2 -35 3237 3133 2292 90 3 0 chr5 119087274 119087563 -80542587 - AluSg1 SINE Alu -19 290 1 388 333 75 6 chr5 119088705 119088879 -80541271 + MIR SINE MIR 31 216 -46 2253 112 7 0 chr5 119088994 119089297 -80540853 + AluSg SINE Alu 6 310 0 510 248 220 50 chr5 119089352 119089684 -80540466 + MLT1F LTR MaLR 11 353 -189 398 213 85 11 chr5 119089686 119089780 -80540370 + MLT1F LTR MaLR 471 571 -24 268 212 15 45 chr5 119089903 119089969 -80540181 + MIR3 SINE MIR 136 199 -9 29 0 0 0 chr5 119090392 119090421 -80539729 + AT_rich Low_complexity Low_complexity 1 29 0 1874 118 0 19 chr5 119091929 119092200 -80537950 + AluSx SINE Alu 44 309 -3 184 253 132 33 chr5 119092819 119092910 -80537240 + MIR SINE MIR 36 135 -73 234 91 0 0 chr5 119095103 119095136 -80535014 + (A)n Simple_repeat Simple_repeat 1 33 0 199 290 77 106 chr5 119096196 119096693 -80533457 - L2 LINE L2 -76 3196 2702 1912 112 12 62 chr5 119097156 119097272 -80532878 + AluSx SINE Alu 6 126 -186 1679 108 4 4 chr5 119097272 119097504 -80532646 + AluSg SINE Alu 58 289 -21 1912 112 12 62 chr5 119097504 119097708 -80532442 + AluSx SINE Alu 126 310 -2 423 381 85 21 chr5 119097746 119098455 -80531695 - L2 LINE L2 -817 2497 1744 2411 79 0 19 chr5 119098937 119099277 -80530873 + AluSg SINE Alu 1 334 0 219 146 0 0 chr5 119101513 119101554 -80528596 + (A)n Simple_repeat Simple_repeat 1 41 0 497 333 126 11 chr5 119101591 119101939 -80528211 + L3b LINE CR1 1194 1581 -2 1789 180 10 0 chr5 119102441 119102736 -80527414 - AluJo SINE Alu -14 298 1 1835 167 3 7 chr5 119106167 119106461 -80523689 - AluSx SINE Alu -19 293 1 248 279 116 0 chr5 119107740 119107894 -80522256 - L1 LINE L1 -749 5397 5215 22 0 0 0 chr5 119108261 119108283 -80521867 + AT_rich Low_complexity Low_complexity 1 22 0 202 256 47 58 chr5 119108473 119108559 -80521591 + L2 LINE L2 3182 3266 -47 337 216 128 34 chr5 119109206 119109354 -80520796 + L1MC/D LINE L1 5663 5824 -348 1477 156 87 35 chr5 119109404 119109693 -80520457 - AluJo SINE Alu -6 306 3 274 307 0 0 chr5 119110614 119110689 -80519461 - MER112 DNA MER1_type -4 256 182 293 279 91 125 chr5 119111330 119111892 -80518258 + L2 LINE L2 2256 2798 -516 443 244 114 0 chr5 119112014 119112137 -80518013 + L2 LINE L2 3168 3304 -9 21 36 0 0 chr5 119113694 119113722 -80516428 + AT_rich Low_complexity Low_complexity 1 28 0 32 0 0 0 chr5 119113847 119113879 -80516271 + AT_rich Low_complexity Low_complexity 1 32 0 1835 158 7 0 chr5 119113892 119114170 -80515980 - AluJb SINE Alu -32 280 1 2438 83 0 0 chr5 119114255 119114555 -80515595 - AluSx SINE Alu -12 300 1 26 93 0 0 chr5 119115002 119115077 -80515073 + AT_rich Low_complexity Low_complexity 1 75 0 1895 260 57 45 chr5 119115402 119115565 -80514585 + MLT2F LTR ERVL 1 161 -502 1414 206 84 40 chr5 119115565 119115944 -80514206 - MSTD LTR MaLR 0 396 1 1895 260 57 45 chr5 119115944 119116430 -80513720 + MLT2F LTR ERVL 161 658 -5 983 232 140 98 chr5 119116622 119117359 -80512791 + LTR41 LTR ERVL 1 768 -5 22 56 0 0 chr5 119117382 119117418 -80512732 + AT_rich Low_complexity Low_complexity 1 36 0 231 181 42 28 chr5 119117587 119117659 -80512491 - MLT1E LTR MaLR -12 581 509 1988 156 26 29 chr5 119118613 119118646 -80511504 - L1MC3 LINE L1 0 7785 7753 1892 88 11 31 chr5 119118646 119118906 -80511244 + AluSq SINE Alu 44 298 -15 1988 156 26 29 chr5 119118906 119119073 -80511077 - L1MC3 LINE L1 -32 7753 7587 333 68 0 0 chr5 119119073 119119117 -80511033 + (TG)n Simple_repeat Simple_repeat 2 45 0 1988 156 26 29 chr5 119119117 119119332 -80510818 - L1MC3 LINE L1 -198 7587 7370 284 0 0 27 chr5 119120829 119120866 -80509284 + (TTCC)n Simple_repeat Simple_repeat 4 39 0 739 150 12 14 chr5 119120889 119121148 -80509002 - AluJb SINE Alu -7 305 2 677 292 71 42 chr5 119121191 119121509 -80508641 + MLT1J2 LTR MaLR 60 392 -58 4342 68 9 2 chr5 119121509 119122084 -80508066 - L1PB1 LINE L1 -1 6150 5572 677 292 71 42 chr5 119122084 119122145 -80508005 + MLT1J2 LTR MaLR 392 450 0 187 250 40 169 chr5 119122163 119122287 -80507863 - L2 LINE L2 -133 3139 3032 767 272 47 17 chr5 119122287 119122522 -80507628 - LTR67 LTR ERVL -280 277 36 282 292 34 11 chr5 119122553 119122642 -80507508 - L2 LINE L2 -35 3278 3188 374 290 10 0 chr5 119123271 119123371 -80506779 + L2 LINE L2 3168 3268 -4 20450 146 29 15 chr5 119123523 119125984 -80504166 + L1MA2 LINE L1 17 2443 -5280 2194 107 3 10 chr5 119125984 119126312 -80503838 + AluSq SINE Alu 5 330 0 20450 146 29 15 chr5 119126312 119127102 -80503048 + L1MA2 LINE L1 2443 3221 -4502 523 67 0 0 chr5 119127102 119127177 -80502973 + L1PA5 LINE L1 6080 6154 0 20450 146 29 15 chr5 119127177 119131502 -80498648 + L1MA2 LINE L1 3221 7714 -9 22 0 0 0 chr5 119132049 119132071 -80498079 + AT_rich Low_complexity Low_complexity 1 22 0 225 320 46 39 chr5 119132704 119132857 -80497293 + L2 LINE L2 2828 2981 -291 535 263 144 51 chr5 119133668 119134022 -80496128 - MLT1I LTR MaLR -2 407 21 2361 97 3 0 chr5 119134089 119134398 -80495752 - AluSx SINE Alu -2 310 1 225 0 0 0 chr5 119134447 119134472 -80495678 + (TTA)n Simple_repeat Simple_repeat 2 26 0 209 219 0 16 chr5 119134623 119134687 -80495463 + (TA)n Simple_repeat Simple_repeat 1 63 0 1568 180 16 62 chr5 119135157 119135545 -80494605 - MLT1A2 LTR MaLR -4 370 1 1361 142 138 32 chr5 119135728 119135974 -80494176 - AluJo SINE Alu -12 300 29 291 205 41 16 chr5 119135975 119136097 -80494053 + (TA)n Simple_repeat Simple_repeat 1 125 0 291 264 66 0 chr5 119136520 119136626 -80493524 - MIR SINE MIR -28 234 122 740 219 99 33 chr5 119136665 119136907 -80493243 + MIR SINE MIR 4 261 -1 3957 134 24 22 chr5 119137077 119137787 -80492363 + MER50 LTR ERV1 1 711 -23 225 343 49 21 chr5 119139045 119139188 -80490962 + L3 LINE CR1 1430 1576 -1 23 33 0 0 chr5 119139282 119139312 -80490838 + AT_rich Low_complexity Low_complexity 1 30 0 339 250 0 0 chr5 119139500 119139604 -80490546 - L1MEd LINE L1 -2370 3759 3656 752 261 46 25 chr5 119139642 119139926 -80490224 - L1MEd LINE L1 -2580 3549 3260 715 233 121 13 chr5 119140321 119140694 -80489456 - L1MEd LINE L1 -2865 3264 2852 3215 153 16 32 chr5 119140694 119141257 -80488893 + MLT2B3 LTR ERVL 1 554 0 251 175 18 0 chr5 119141291 119141348 -80488802 - Alu SINE Alu -2 300 243 880 92 0 0 chr5 119141348 119141457 -80488693 - AluSq/x SINE Alu -203 109 1 514 282 38 56 chr5 119141477 119141871 -80488279 - L1MEd LINE L1 -3386 2743 2357 416 293 29 14 chr5 119141876 119142016 -80488134 + MER21B LTR ERV1 1 142 -721 2377 140 40 26 chr5 119142088 119142128 -80488022 - MSTA LTR MaLR 0 428 390 2228 110 7 0 chr5 119142128 119142436 -80487714 + AluSg SINE Alu 1 310 0 2377 140 40 26 chr5 119142436 119142816 -80487334 - MSTA LTR MaLR -38 390 2 8954 168 33 18 chr5 119142817 119143082 -80487068 - MSTA-int LTR MaLR 0 1651 1391 2282 123 3 0 chr5 119143082 119143391 -80486759 + AluSg SINE Alu 1 310 0 8954 168 33 18 chr5 119143391 119144752 -80485398 - MSTA-int LTR MaLR -260 1391 1 2745 109 44 7 chr5 119144752 119145165 -80484985 - MSTA LTR MaLR 0 428 1 349 256 118 44 chr5 119145165 119145571 -80484579 - L1MEd LINE L1 -5039 1080 645 1842 169 10 3 chr5 119145929 119146231 -80483919 - AluJo SINE Alu -8 304 1 450 259 90 5 chr5 119146377 119146589 -80483561 - HAL1 LINE L1 -423 2084 1855 2040 113 65 73 chr5 119146641 119147189 -80482961 - LTR35 LTR ERV1 0 618 1 707 232 96 16 chr5 119147201 119147451 -80482699 - HAL1 LINE L1 -866 1641 1372 4288 154 80 26 chr5 119147747 119148552 -80481598 - MER21B LTR ERV1 -15 848 1 491 238 93 10 chr5 119148576 119148769 -80481381 - HAL1 LINE L1 -1463 1044 836 2194 111 0 13 chr5 119150065 119150372 -80479778 + AluSx SINE Alu 1 303 -9 413 349 30 18 chr5 119150379 119150548 -80479602 + MIR3 SINE MIR 30 200 -8 21 36 0 0 chr5 119151629 119151657 -80478493 + AT_rich Low_complexity Low_complexity 1 28 0 813 179 8 159 chr5 119152010 119152374 -80477776 + MLT1A1 LTR MaLR 26 334 -31 1068 234 0 9 chr5 119152606 119152832 -80477318 + MER58A DNA MER1_type 1 224 0 309 326 147 0 chr5 119153053 119153182 -80476968 + L2 LINE L2 3125 3272 0 407 267 130 27 chr5 119153380 119153526 -80476624 + MIR SINE MIR 50 210 -52 2836 220 52 87 chr5 119156534 119156640 -80473510 - L1M4 LINE L1 -1410 4736 4628 2429 66 0 7 chr5 119156640 119156945 -80473205 - AluY SINE Alu -8 303 1 2836 220 52 87 chr5 119156945 119157507 -80472643 - L1M4 LINE L1 -1518 4628 4048 1886 168 3 3 chr5 119157507 119157811 -80472339 + AluJb SINE Alu 1 304 -8 2836 220 52 87 chr5 119157811 119157851 -80472299 - L1M4 LINE L1 -2098 4048 4008 4010 142 11 51 chr5 119157851 119158571 -80471579 + LTR8 LTR ERV1 1 691 0 2836 220 52 87 chr5 119158571 119159117 -80471033 - L1M4 LINE L1 -2138 4008 3523 294 296 75 69 chr5 119159323 119159482 -80470668 - L2 LINE L2 -39 3233 3074 274 232 101 10 chr5 119159845 119159944 -80470206 + Charlie8 DNA MER1_type 59 166 -2251 189 333 0 27 chr5 119160590 119160665 -80469485 - MIR SINE MIR -41 221 149 2194 98 7 26 chr5 119160669 119160976 -80469174 - AluSx SINE Alu -11 301 1 224 333 37 12 chr5 119162343 119162424 -80467726 - MIR3 SINE MIR -7 201 119 1725 152 0 11 chr5 119162474 119162738 -80467412 + AluSq SINE Alu 1 261 -52 189 0 0 0 chr5 119162747 119162768 -80467382 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 289 294 96 27 chr5 119163420 119163566 -80466584 + MIR SINE MIR 32 187 -75 381 221 44 26 chr5 119164752 119164865 -80465285 + MSTB2 LTR MaLR 1 115 -342 182 91 30 0 chr5 119164895 119164928 -80465222 + (CA)n Simple_repeat Simple_repeat 2 35 0 1601 268 220 8 chr5 119165011 119165838 -80464312 - L2 LINE L2 -267 3046 2021 1974 148 17 31 chr5 119166205 119166557 -80463593 + MER7A DNA MER2_type 1 345 -1 24 32 0 0 chr5 119169292 119169323 -80460827 + AT_rich Low_complexity Low_complexity 1 31 0 499 210 138 14 chr5 119169375 119169513 -80460637 + MIR SINE MIR 9 163 -99 228 274 55 0 chr5 119169595 119169668 -80460482 + MIR SINE MIR 172 248 -14 31 0 0 0 chr5 119170914 119170945 -80459205 + AT_rich Low_complexity Low_complexity 1 31 0 746 237 53 53 chr5 119172962 119173207 -80456943 + MIR SINE MIR 8 252 -10 338 327 92 57 chr5 119177773 119178424 -80451726 + HAL1 LINE L1 1 674 -1833 393 341 111 48 chr5 119178829 119179242 -80450908 + L3 LINE CR1 581 1019 -558 219 263 188 0 chr5 119230143 119230223 -80399927 + L2 LINE L2 3203 3297 -16 667 231 68 59 chr5 119230255 119230476 -80399674 + MER58A DNA MER1_type 2 224 0 30 27 0 0 chr5 119230718 119230755 -80399395 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr5 119230787 119230810 -80399340 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 119231979 119232001 -80398149 + AT_rich Low_complexity Low_complexity 1 22 0 724 270 95 65 chr5 119232050 119232903 -80397247 + L1ME4a LINE L1 5150 6032 -89 1747 182 0 19 chr5 119233245 119233553 -80396597 + AluJb SINE Alu 1 302 -10 537 333 87 47 chr5 119234027 119234413 -80395737 - L2 LINE L2 -622 2692 2270 2008 99 0 0 chr5 119234413 119234676 -80395474 + AluSg SINE Alu 39 301 -9 537 333 87 47 chr5 119234676 119234910 -80395240 - L2 LINE L2 -1044 2270 2047 7956 108 78 2 chr5 119234934 119236143 -80394007 + HSMAR2 DNA Mariner 3 1302 0 186 267 187 0 chr5 119236221 119236296 -80393854 + L2 LINE L2 3150 3238 -34 * 334 323 114 25 chr5 119236285 119236443 -80393707 - MER91B DNA MER1_type -5 185 14 294 321 36 74 chr5 119236538 119236750 -80393400 - MIR3 SINE MIR -56 206 4 23 0 0 0 chr5 119236920 119236943 -80393207 + AT_rich Low_complexity Low_complexity 1 23 0 279 0 0 0 chr5 119237175 119237206 -80392944 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 2216 102 0 0 chr5 119237207 119237500 -80392650 - AluSg SINE Alu -17 293 1 390 21 0 0 chr5 119237686 119237733 -80392417 + (TG)n Simple_repeat Simple_repeat 2 48 0 195 69 0 0 chr5 119237996 119238025 -80392125 + (TG)n Simple_repeat Simple_repeat 2 30 0 379 334 75 68 chr5 119238352 119238765 -80391385 + L2 LINE L2 2897 3312 -1 24 0 0 0 chr5 119239066 119239090 -80391060 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 119239301 119239329 -80390821 + AT_rich Low_complexity Low_complexity 1 28 0 32 0 0 0 chr5 119239932 119239964 -80390186 + AT_rich Low_complexity Low_complexity 1 32 0 2127 113 7 3 chr5 119240547 119240848 -80389302 - AluSx SINE Alu -10 302 1 207 0 0 0 chr5 119243138 119243161 -80386989 + (TA)n Simple_repeat Simple_repeat 1 23 0 21 36 0 0 chr5 119244020 119244048 -80386102 + AT_rich Low_complexity Low_complexity 1 28 0 23674 166 30 25 chr5 119244088 119245808 -80384342 - L1PA11 LINE L1 -1 7611 5901 1971 124 0 17 chr5 119245808 119246134 -80384016 - AluSx SINE Alu 0 321 1 23674 166 30 25 chr5 119246134 119246385 -80383765 - L1PA11 LINE L1 -1711 5901 5653 1898 145 3 10 chr5 119246385 119246681 -80383469 - AluSx SINE Alu -14 298 5 23674 166 30 25 chr5 119246681 119250918 -80379232 - L1PA11 LINE L1 -1959 5653 10 1447 296 170 19 chr5 119250992 119251956 -80378194 - L2 LINE L2 0 3313 2190 22 35 0 0 chr5 119252696 119252725 -80377425 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr5 119252916 119252949 -80377201 + AT_rich Low_complexity Low_complexity 1 33 0 1757 183 0 3 chr5 119253087 119253402 -80376748 - AluJb SINE Alu 0 312 1 301 298 159 54 chr5 119253416 119253768 -80376382 - L1M4 LINE L1 -1604 4542 4154 237 83 0 0 chr5 119253895 119253931 -80376219 + (TG)n Simple_repeat Simple_repeat 2 37 0 847 193 0 31 chr5 119253931 119254092 -80376058 - FRAM SINE Alu -20 156 1 270 0 0 0 chr5 119254099 119254129 -80376021 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 499 301 139 53 chr5 119254150 119254994 -80375156 - L1M4 LINE L1 -2208 3938 3023 1142 175 101 73 chr5 119255653 119256008 -80374142 - MLT1A1 LTR MaLR 0 365 1 361 316 77 93 chr5 119256308 119256843 -80373307 + L2 LINE L2 1818 2343 -971 26 0 0 0 chr5 119256968 119256994 -80373156 + AT_rich Low_complexity Low_complexity 1 26 0 26 30 0 0 chr5 119257518 119257551 -80372599 + AT_rich Low_complexity Low_complexity 1 33 0 241 313 40 20 chr5 119257922 119258021 -80372129 - L2 LINE L2 -51 3262 3162 253 241 50 47 chr5 119258909 119259077 -80371073 + L1MC5 LINE L1 7711 7886 -140 2334 86 10 0 chr5 119259208 119259512 -80370638 - AluSg SINE Alu -1 309 3 301 238 130 0 chr5 119259521 119259655 -80370495 - L1MC5 LINE L1 -547 7495 7268 400 292 47 76 chr5 119259716 119259887 -80370263 - MIR3 SINE MIR -11 197 32 1492 170 26 36 chr5 119260506 119260812 -80369338 - AluJo SINE Alu -9 303 1 380 243 66 0 chr5 119261200 119261217 -80368933 - L1MA10 LINE L1 0 6334 6318 2710 194 63 77 chr5 119261217 119262586 -80367564 - L1ME2 LINE L1 -9 6224 4867 189 0 0 0 chr5 119262586 119262607 -80367543 + (TC)n Simple_repeat Simple_repeat 2 22 0 2710 194 63 77 chr5 119262607 119262619 -80367531 - L1ME2 LINE L1 -1366 4867 4856 575 120 40 17 chr5 119262653 119262828 -80367322 + (TA)n Simple_repeat Simple_repeat 2 180 0 575 120 40 17 chr5 119262845 119263020 -80367130 + (TA)n Simple_repeat Simple_repeat 2 180 0 575 126 49 13 chr5 119263037 119263314 -80366836 + (TA)n Simple_repeat Simple_repeat 1 286 0 2224 225 108 14 chr5 119263343 119264046 -80366104 - L1ME2 LINE L1 -1349 4866 4098 919 228 92 4 chr5 119264031 119264330 -80365820 - L1 LINE L1 -2273 3942 3601 * 2063 105 0 7 chr5 119264330 119264657 -80365493 - AluSx SINE Alu 0 325 1 242 252 110 26 chr5 119264657 119264812 -80365338 - L1ME2 LINE L1 -4421 1975 1808 785 249 54 68 chr5 119264893 119265141 -80365009 - L1ME2 LINE L1 -5130 1266 1016 285 29 0 0 chr5 119265141 119265175 -80364975 + (TA)n Simple_repeat Simple_repeat 2 35 0 1511 180 10 27 chr5 119265180 119265474 -80364676 + AluJo SINE Alu 1 289 -23 785 249 54 68 chr5 119265474 119265629 -80364521 - L1ME2 LINE L1 -5384 1012 863 1230 289 57 38 chr5 119265896 119266454 -80363696 - L1ME2 LINE L1 -5617 779 211 26 64 0 0 chr5 119267369 119267416 -80362734 + AT_rich Low_complexity Low_complexity 1 47 0 296 192 96 0 chr5 119268327 119268400 -80361750 - MIR SINE MIR -109 153 74 21 0 0 0 chr5 119268593 119268614 -80361536 + AT_rich Low_complexity Low_complexity 1 21 0 261 221 0 0 chr5 119269930 119269998 -80360152 + CT-rich Low_complexity Low_complexity 3 70 0 32 26 0 0 chr5 119271215 119271254 -80358896 + AT_rich Low_complexity Low_complexity 1 39 0 1713 149 19 38 chr5 119271642 119271958 -80358192 - AluJo SINE Alu -2 310 1 25 0 0 0 chr5 119271967 119271992 -80358158 + AT_rich Low_complexity Low_complexity 1 25 0 289 342 79 7 chr5 119272733 119272885 -80357265 + MIR SINE MIR 45 207 -55 969 63 87 0 chr5 119273648 119273775 -80356375 + MER85 DNA T2_type 2 139 0 1816 173 10 0 chr5 119275088 119275377 -80354773 - AluJb SINE Alu -20 292 1 2322 105 0 0 chr5 119275557 119275852 -80354298 + AluSg SINE Alu 1 295 -15 1789 257 78 38 chr5 119276856 119277487 -80352663 + L2 LINE L2 2304 2959 -355 1557 205 20 29 chr5 119277575 119277926 -80352224 - L1ME1 LINE L1 -25 6141 5794 1914 207 83 23 chr5 119277926 119278646 -80351504 - L1ME1 LINE L1 -663 5579 4817 1014 257 28 21 chr5 119278642 119278926 -80351224 + L1MEc LINE L1 285 570 -5826 * 2377 230 48 17 chr5 119278931 119279033 -80351117 + L1MEc LINE L1 2155 2252 -3963 2713 95 22 6 chr5 119279033 119279391 -80350759 + THE1B LTR MaLR 1 364 0 2377 230 48 17 chr5 119279391 119280053 -80350097 + L1MEc LINE L1 2252 2896 -3319 257 257 46 55 chr5 119280065 119280174 -80349976 - MLT1K LTR MaLR -285 303 196 1922 176 69 27 chr5 119280311 119280788 -80349362 + L1 LINE L1 4256 4752 -1394 1411 127 14 35 chr5 119280791 119281144 -80349006 + MSTB1 LTR MaLR 1 432 0 401 319 6 19 chr5 119281144 119281301 -80348849 + L1 LINE L1 4751 4905 -1241 2537 169 40 100 chr5 119281301 119281951 -80348199 + LTR9 LTR ERV1 2 612 0 4880 173 34 21 chr5 119282005 119283470 -80346680 + HUERS-P3 LTR ERV1 243 1999 -5682 3446 124 24 20 chr5 119283473 119284012 -80346138 + HUERS-P3 LTR ERV1 2102 2642 -4776 2592 157 35 2 chr5 119284012 119284439 -80345711 - LTR8 LTR ERV1 -250 441 1 12663 135 20 58 chr5 119284439 119284769 -80345381 + HUERS-P3 LTR ERV1 3073 3414 -4004 2141 130 3 3 chr5 119284769 119285077 -80345073 - AluSx SINE Alu -4 308 1 12663 135 20 58 chr5 119285077 119287080 -80343070 + HUERS-P3 LTR ERV1 3414 5318 -2100 227 284 40 14 chr5 119287159 119287233 -80342917 - LTR67 LTR ERVL -47 510 435 212 338 26 0 chr5 119288011 119288088 -80342062 - MIR3 SINE MIR -29 179 101 2778 182 25 9 chr5 119288525 119289195 -80340955 - MER50 LTR ERV1 0 734 22 2165 118 52 35 chr5 119289197 119289545 -80340605 + THE1B LTR MaLR 11 364 0 3198 126 55 116 chr5 119289569 119290282 -80339868 - LTR34 LTR ERV1 -30 669 1 395 264 11 0 chr5 119290896 119290987 -80339163 + LTR33 LTR ERVL 109 200 -321 228 253 40 13 chr5 119291024 119291099 -80339051 - LTR36 LTR ERV1 0 611 535 685 257 69 77 chr5 119291105 119291557 -80338593 - LTR38 LTR ERV1 -108 448 1 882 189 125 36 chr5 119291567 119291815 -80338335 + LTR33 LTR ERVL 245 514 -7 832 164 14 82 chr5 119291844 119292064 -80338086 - L1MA9 LINE L1 -222 6154 5950 476 193 11 0 chr5 119292064 119292152 -80337998 - L1MA9 LINE L1 -1110 5100 5012 648 243 191 5 chr5 119292380 119292590 -80337560 + MIR SINE MIR 2 250 -12 2300 64 0 7 chr5 119292594 119292876 -80337274 - AluY SINE Alu -5 306 27 6254 142 178 86 chr5 119292876 119294428 -80335722 + pTR5 LTR ERV1 744 2438 0 5512 84 122 1 chr5 119294476 119295213 -80334937 - LTR12 LTR ERV1 0 826 1 4580 97 2 0 chr5 119295213 119295823 -80334327 - HERV9 LTR ERV1 0 8399 7789 367 161 0 0 chr5 119295819 119295881 -80334269 - HERV9 LTR ERV1 -835 7564 7503 * 29287 102 19 7 chr5 119295879 119301143 -80329007 - HERV9 LTR ERV1 -3413 4986 2 5461 88 117 5 chr5 119301144 119301887 -80328263 - LTR12 LTR ERV1 0 826 1 4699 173 55 29 chr5 119301931 119302055 -80328095 - L1MA9 LINE L1 -1183 5027 4908 1941 147 0 17 chr5 119302055 119302355 -80327795 + AluSg SINE Alu 1 295 -15 4699 173 55 29 chr5 119302355 119302962 -80327188 - L1MA9 LINE L1 -1302 4908 4257 180 0 0 0 chr5 119302962 119302982 -80327168 + (TA)n Simple_repeat Simple_repeat 1 20 0 4699 173 55 29 chr5 119302982 119303328 -80326822 - L1MA9 LINE L1 -1953 4257 3921 645 236 236 16 chr5 119303334 119303584 -80326566 - L1MA9 LINE L1 -3661 2549 2245 2636 240 122 35 chr5 119303594 119304341 -80325809 - L1MA9 LINE L1 -5329 812 1 1080 288 92 18 chr5 119304681 119305180 -80324970 + L2 LINE L2 2778 3312 -1 1380 184 21 60 chr5 119305268 119305550 -80324600 - AluJo SINE Alu -41 271 1 2044 111 0 78 chr5 119306073 119306405 -80323745 + AluSx SINE Alu 1 306 -6 25 51 0 0 chr5 119306547 119306586 -80323564 + AT_rich Low_complexity Low_complexity 1 39 0 302 236 41 32 chr5 119307223 119307346 -80322804 + L1 LINE L1 3714 3837 -2309 * 777 257 126 29 chr5 119307345 119307827 -80322323 + L1MC4 LINE L1 7354 8002 -40 2306 113 0 0 chr5 119307992 119308301 -80321849 + AluSx SINE Alu 1 309 -3 324 274 116 55 chr5 119308355 119308501 -80321649 + HAL1b LINE L1 13 167 -1181 21 0 0 0 chr5 119308630 119308651 -80321499 + AT_rich Low_complexity Low_complexity 1 21 0 455 272 92 16 chr5 119309328 119309512 -80320638 + MIR SINE MIR 50 247 -15 21 0 0 0 chr5 119309839 119309860 -80320290 + AT_rich Low_complexity Low_complexity 1 21 0 726 309 67 49 chr5 119310824 119311255 -80318895 + L2 LINE L2 2286 2724 -590 279 366 40 10 chr5 119311405 119311506 -80318644 + L2 LINE L2 2981 3084 -188 2335 191 31 71 chr5 119311834 119312411 -80317739 + MLT2B3 LTR ERVL 1 554 0 351 293 13 84 chr5 119312528 119312644 -80317506 + L1ME3A LINE L1 5962 6056 -114 914 210 60 0 chr5 119312644 119312811 -80317339 - MER45A DNA AcHobo -1 177 1 351 293 13 84 chr5 119312811 119312919 -80317231 + L1ME3A LINE L1 6056 6170 0 707 314 75 57 chr5 119312996 119313035 -80317115 + HAL1 LINE L1 1138 1175 -1332 2176 107 0 7 chr5 119313035 119313326 -80316824 + AluSg1 SINE Alu 1 289 -20 707 314 75 57 chr5 119313326 119313728 -80316422 + HAL1 LINE L1 1175 1587 -920 976 147 76 60 chr5 119313732 119313983 -80316167 - Charlie1 DNA MER1_type 0 2761 2507 1559 239 45 20 chr5 119313986 119314388 -80315762 + L1M4 LINE L1 394 805 -5737 2222 108 71 11 chr5 119315147 119315499 -80314651 + THE1C LTR MaLR 3 375 0 194 319 0 14 chr5 119315955 119316024 -80314126 - MIR SINE MIR -17 245 178 1708 243 76 39 chr5 119316708 119317197 -80312953 + MLT2B2 LTR ERVL 1 507 -8 6976 221 62 45 chr5 119317203 119318906 -80311244 + MSTD-int LTR MaLR 2 1734 -1 1400 214 138 22 chr5 119318907 119319262 -80310888 + MSTD LTR MaLR 1 396 0 1521 189 93 0 chr5 119319911 119320074 -80310076 - AluJb SINE Alu -6 296 150 198 0 0 0 chr5 119320074 119320096 -80310054 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1521 189 93 0 chr5 119320096 119320202 -80309948 - AluJb SINE Alu -152 150 2 2563 182 18 37 chr5 119320219 119320488 -80309662 - L1MB3 LINE L1 -12 6171 5915 1582 174 14 17 chr5 119320488 119320782 -80309368 - AluJo SINE Alu -19 293 1 2563 182 18 37 chr5 119320782 119321022 -80309128 - L1MB3 LINE L1 -268 5915 5672 1376 191 27 24 chr5 119321938 119322167 -80307983 + AluJo SINE Alu 1 233 -79 3719 70 9 0 chr5 119322167 119322607 -80307543 - MLT2A1 LTR ERVL 0 444 1 1376 191 27 24 chr5 119322607 119322670 -80307480 + AluJo SINE Alu 233 294 -18 28941 77 18 3 chr5 119322673 119327637 -80302513 + L1PA6 LINE L1 1114 6154 0 375 242 31 77 chr5 119327784 119328098 -80302052 - LTR38B LTR ERV1 0 611 307 468 202 0 35 chr5 119328373 119328487 -80301663 - LTR38B LTR ERV1 -500 110 1 3249 148 49 37 chr5 119328669 119329296 -80300854 - MER41B LTR ERV1 0 635 1 844 276 9 18 chr5 119329627 119329855 -80300295 + MER21B LTR ERV1 3 228 -635 * 1567 167 22 35 chr5 119329837 119330155 -80299995 + MER21B LTR ERV1 539 852 -11 2449 192 50 61 chr5 119330680 119331383 -80298767 - MER4D LTR ERV1 -10 893 98 2189 133 0 0 chr5 119331383 119331692 -80298458 + AluSq SINE Alu 1 309 -4 2449 192 50 61 chr5 119331692 119331731 -80298419 - MER4D LTR ERV1 -805 98 60 1493 168 25 3 chr5 119331715 119332000 -80298150 - MER49 LTR ERV1 -629 294 4 * 746 204 39 22 chr5 119332491 119332672 -80297478 + MLT1A2 LTR MaLR 190 373 -1 1269 220 90 16 chr5 119333285 119333663 -80296487 + LTR40b LTR ERVL 3 408 -54 24 0 0 0 chr5 119334042 119334066 -80296084 + AT_rich Low_complexity Low_complexity 1 24 0 426 219 119 38 chr5 119335040 119335200 -80294950 - MER5B DNA MER1_type -2 176 4 1494 193 156 48 chr5 119335271 119335727 -80294423 + MLT1D LTR MaLR 1 505 0 364 324 109 24 chr5 119336043 119336336 -80293814 - MLT1K LTR MaLR -132 456 139 741 210 60 73 chr5 119336933 119337247 -80292903 - L1MC5 LINE L1 -500 7461 7152 935 189 166 0 chr5 119337366 119337616 -80292534 - Charlie1b DNA MER1_type -219 304 1 478 365 25 60 chr5 119337616 119337901 -80292249 - HAL1 LINE L1 -2045 462 188 1492 182 0 0 chr5 119337941 119338188 -80291962 - AluJo SINE Alu -28 284 38 1452 304 43 23 chr5 119338199 119338759 -80291391 + MLT1G LTR MaLR 10 580 -10 304 298 43 68 chr5 119338768 119338929 -80291221 - HAL1 LINE L1 -2317 190 34 286 172 0 0 chr5 119339693 119339751 -80290399 + L1PB1 LINE L1 138 195 -6668 * 14279 187 17 11 chr5 119339746 119341805 -80288345 + L1PB1 LINE L1 1111 3156 -3711 2149 112 0 7 chr5 119341805 119342100 -80288050 + AluSq SINE Alu 16 308 -5 14279 187 17 11 chr5 119342100 119345346 -80284804 + L1PB1 LINE L1 3156 6512 -355 375 23 0 0 chr5 119345346 119345390 -80284760 + (CA)n Simple_repeat Simple_repeat 2 45 0 14279 187 17 11 chr5 119345390 119345747 -80284403 + L1PB1 LINE L1 6512 6865 -2 1755 179 0 29 chr5 119346241 119346382 -80283768 + AluJo SINE Alu 1 145 -167 2490 75 0 3 chr5 119346382 119346687 -80283463 + AluY SINE Alu 1 304 -7 1755 179 0 29 chr5 119346687 119346858 -80283292 + AluJo SINE Alu 145 304 -8 333 0 0 0 chr5 119347625 119347662 -80282488 + (TG)n Simple_repeat Simple_repeat 2 38 0 240 269 96 19 chr5 119347664 119347768 -80282382 + MER34B LTR ERV1 1 112 -453 445 270 45 55 chr5 119347862 119348151 -80281999 + MER34B LTR ERV1 279 564 -1 212 171 0 0 chr5 119348164 119348205 -80281945 + T-rich Low_complexity Low_complexity 1 41 0 289 318 89 28 chr5 119348234 119348413 -80281737 + MLT1J LTR MaLR 226 415 -96 4163 129 23 47 chr5 119349370 119350115 -80280035 + LTR8A LTR ERV1 1 727 0 4011 111 14 2 chr5 119350633 119351191 -80278959 - MER61E LTR ERV1 -4 565 1 23 68 0 0 chr5 119351717 119351761 -80278389 + AT_rich Low_complexity Low_complexity 1 44 0 285 29 0 0 chr5 119354714 119354748 -80275402 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 2075 230 69 13 chr5 119355790 119356342 -80273808 + MER119 DNA MER1_type 1 583 0 816 293 82 41 chr5 119356347 119356625 -80273525 + L2 LINE L2 2880 3182 -131 204 45 23 45 chr5 119356625 119356669 -80273481 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 816 293 82 41 chr5 119356669 119356806 -80273344 + L2 LINE L2 3182 3312 -1 545 200 19 0 chr5 119357099 119357204 -80272946 + Tigger3(Golem) DNA MER2_type 2 108 -2921 3477 112 84 39 chr5 119357204 119357475 -80272675 + Tigger3(Golem) DNA MER2_type 2285 2542 -487 1943 132 7 7 chr5 119357475 119357763 -80272387 - AluSx SINE Alu -24 288 1 3477 112 84 39 chr5 119357763 119358203 -80271947 + Tigger3(Golem) DNA MER2_type 2542 3028 -1 1608 243 129 37 chr5 119358438 119358981 -80271169 - MLT1E LTR MaLR 0 593 1 648 186 59 0 chr5 119359894 119360012 -80270138 + FLAM_C SINE Alu 2 126 -7 767 203 68 6 chr5 119361000 119361177 -80268973 - MER5A DNA MER1_type 0 189 2 457 294 72 10 chr5 119361637 119361831 -80268319 + L2 LINE L2 3107 3312 -1 360 211 48 48 chr5 119362892 119362996 -80267154 - MER20B DNA MER1_type -48 171 68 330 189 40 0 chr5 119363532 119363606 -80266544 - MER116 DNA Mariner -3 77 1 2104 144 7 0 chr5 119413671 119413976 -80216174 + AluJb SINE Alu 2 308 -4 341 323 62 6 chr5 119413983 119414144 -80216006 + HAL1b LINE L1 1179 1348 0 441 81 0 0 chr5 119414704 119414766 -80215384 + (TCCCC)n Simple_repeat Simple_repeat 1 62 0 824 196 0 0 chr5 119414766 119414904 -80215246 - FRAM SINE Alu -16 160 23 9315 131 72 13 chr5 119415051 119416850 -80213300 + MER31-int LTR ERV1 3886 5790 -541 260 301 0 24 chr5 119416862 119416945 -80213205 + MER31-int LTR ERV1 4576 4656 -280 1909 235 94 90 chr5 119417182 119417306 -80212844 - LTR49-int LTR ERV1 -2387 3559 3437 2357 65 0 13 chr5 119417306 119417612 -80212538 - AluY SINE Alu -9 302 1 1909 235 94 90 chr5 119417612 119418313 -80211837 - LTR49-int LTR ERV1 -2509 3437 2741 1972 143 24 0 chr5 119418313 119418649 -80211501 - L1PB4 LINE L1 -2 6154 5811 1909 235 94 90 chr5 119418649 119418819 -80211331 - LTR49-int LTR ERV1 -3205 2741 2573 596 26 13 0 chr5 119418819 119418897 -80211253 + (GA)n Simple_repeat Simple_repeat 2 80 0 1909 235 94 90 chr5 119418897 119418965 -80211185 - LTR49-int LTR ERV1 -3373 2573 2507 1742 125 24 45 chr5 119418965 119419253 -80210897 + AluJo SINE Alu 1 282 -30 1909 235 94 90 chr5 119419253 119419992 -80210158 - LTR49-int LTR ERV1 -3439 2507 1744 1227 231 33 10 chr5 119420283 119420682 -80209468 + L1M4 LINE L1 2283 2690 -3456 * 1241 270 58 80 chr5 119420677 119420917 -80209233 - L1MCc LINE L1 -5074 1349 1105 2220 133 30 25 chr5 119420917 119421279 -80208871 - THE1B LTR MaLR 0 364 1 1241 270 58 80 chr5 119421279 119421749 -80208401 - L1MCc LINE L1 -5318 1105 655 1032 269 33 6 chr5 119422136 119422496 -80207654 - L1MCc LINE L1 -6038 385 16 195 100 0 0 chr5 119423499 119423529 -80206621 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 194 257 0 71 chr5 119423659 119423729 -80206421 - L2 LINE L2 -21 3251 3187 951 341 182 21 chr5 119424154 119424308 -80205842 + L2 LINE L2 2033 2161 -1111 1990 114 7 10 chr5 119424308 119424605 -80205545 - AluSx SINE Alu -16 296 1 951 341 182 21 chr5 119424605 119425514 -80204636 + L2 LINE L2 2161 3272 0 186 71 0 0 chr5 119426030 119426058 -80204092 + (TAA)n Simple_repeat Simple_repeat 2 29 0 705 229 71 0 chr5 119426076 119426246 -80203904 - MIR SINE MIR -28 234 53 252 0 0 0 chr5 119427158 119427186 -80202964 + (CA)n Simple_repeat Simple_repeat 2 29 0 1065 185 124 54 chr5 119427904 119428331 -80201819 - LTR37B LTR ERV1 -5 463 7 258 353 17 8 chr5 119428706 119428825 -80201325 + MIR SINE MIR 5 124 -138 2320 99 3 0 chr5 119428826 119429128 -80201022 - AluSq SINE Alu -10 303 1 2162 187 52 2 chr5 119429260 119429666 -80200484 - MSTB LTR MaLR 0 426 1 369 237 0 0 chr5 119429958 119430034 -80200116 - MER58B DNA MER1_type 0 341 266 459 340 11 27 chr5 119430040 119430225 -80199925 + L3 LINE CR1 1001 1182 -395 557 211 8 38 chr5 119430229 119430282 -80199868 + MER94 DNA DNA 6 59 -75 1251 225 108 12 chr5 119430282 119430709 -80199441 + LTR37B LTR ERV1 1 468 0 557 211 8 38 chr5 119430709 119430788 -80199362 + MER94 DNA DNA 59 134 0 213 211 0 39 chr5 119430789 119430841 -80199309 + L3 LINE CR1 1175 1224 -353 1346 163 156 25 chr5 119431290 119431725 -80198425 + LTR54B LTR ERV1 1 492 -6 2053 203 67 65 chr5 119432120 119432795 -80197355 - LTR8 LTR ERV1 0 691 16 304 216 104 97 chr5 119434713 119434847 -80195303 + HAL1 LINE L1 1897 2031 -476 552 255 26 13 chr5 119434874 119435027 -80195123 + L2 LINE L2 3158 3312 -1 21 0 0 0 chr5 119435147 119435168 -80194982 + AT_rich Low_complexity Low_complexity 1 21 0 37 62 0 0 chr5 119435206 119435271 -80194879 + AT_rich Low_complexity Low_complexity 1 65 0 2967 151 25 25 chr5 119435454 119436051 -80194099 - L1MA8 LINE L1 0 6291 5695 534 243 55 66 chr5 119436074 119436346 -80193804 + HAL1 LINE L1 2236 2504 -3 3725 100 2 6 chr5 119436424 119436936 -80193214 + MER9 LTR ERVK 1 510 -1 4368 84 0 3 chr5 119436937 119437531 -80192619 + HERVK9 LTR ERVK 1 592 -5324 11814 62 0 0 chr5 119437531 119439050 -80191100 + HERVK9 LTR ERVK 1268 2786 -3130 1790 44 4 0 chr5 119439052 119439280 -80190870 + HERVK9 LTR ERVK 3713 3941 -1975 5973 108 12 0 chr5 119439346 119440223 -80189927 + HERVK9 LTR ERVK 4747 5634 -282 2298 96 13 12 chr5 119440248 119440601 -80189549 + HERVK9 LTR ERVK 5635 5916 0 3705 100 0 17 chr5 119440601 119441121 -80189029 + MER9 LTR ERVK 1 511 0 646 291 85 37 chr5 119442148 119442526 -80187624 + LTR16C LTR ERVL 96 491 0 192 268 14 28 chr5 119442998 119443069 -80187081 - MIR SINE MIR -149 113 44 23 0 0 0 chr5 119443413 119443436 -80186714 + AT_rich Low_complexity Low_complexity 1 23 0 225 239 22 0 chr5 119443908 119443954 -80186196 - MIR3 SINE MIR -15 193 147 339 61 20 0 chr5 119444070 119444119 -80186031 + MLT1A1-int LTR MaLR 1686 1735 0 1284 193 95 43 chr5 119444119 119444466 -80185684 + MLT1A1 LTR MaLR 1 365 0 21 57 0 0 chr5 119444791 119444826 -80185324 + AT_rich Low_complexity Low_complexity 1 35 0 186 229 0 0 chr5 119445106 119445176 -80184974 + GA-rich Low_complexity Low_complexity 1 70 0 304 209 152 0 chr5 119445176 119445281 -80184869 - LTR33 LTR ERVL -209 312 192 921 190 25 122 chr5 119445308 119445557 -80184593 + MLT1B LTR MaLR 6 178 -212 1737 185 3 13 chr5 119445557 119445870 -80184280 + AluJb SINE Alu 1 310 -2 921 190 25 122 chr5 119445870 119446065 -80184085 + MLT1B LTR MaLR 178 390 0 345 286 0 0 chr5 119446089 119446173 -80183977 - LTR33 LTR ERVL -377 144 61 207 327 142 18 chr5 119446197 119446310 -80183840 - L2 LINE L2 -1 3312 3186 299 289 115 55 chr5 119446351 119446839 -80183311 - L1MC/D LINE L1 -2027 5781 5265 22 0 0 0 chr5 119447506 119447528 -80182622 + AT_rich Low_complexity Low_complexity 1 22 0 715 190 98 0 chr5 119447583 119447746 -80182404 - MER58A DNA MER1_type 0 224 46 248 268 87 36 chr5 119447783 119447921 -80182229 - MIR3 SINE MIR -60 148 4 2121 155 38 38 chr5 119448075 119448495 -80181655 - MER4E LTR ERV1 0 779 360 21858 116 12 5 chr5 119448506 119448808 -80181342 - L1PA8A LINE L1 -13 6433 6135 2207 124 0 0 chr5 119448808 119449106 -80181044 - AluSg SINE Alu -12 298 1 21858 116 12 5 chr5 119449106 119453207 -80176943 - L1PA8A LINE L1 -311 6135 2003 6191 98 4 22 chr5 119453242 119454194 -80175956 - MER11C LTR ERVK -14 1057 123 6356 212 26 50 chr5 119454194 119456195 -80173955 - L1PA8A LINE L1 -4473 1988 2 1344 127 9 5 chr5 119456199 119456419 -80173731 - MER4B LTR ERV1 -389 221 1 435 193 87 47 chr5 119456715 119456865 -80173285 + MIR SINE MIR 66 221 -41 914 272 16 0 chr5 119457325 119457582 -80172568 + MIR SINE MIR 2 262 0 1701 139 43 21 chr5 119457592 119457872 -80172278 - AluJb SINE Alu -26 286 1 3875 179 44 27 chr5 119458191 119458979 -80171171 - MER21B LTR ERV1 -61 802 1 727 243 128 58 chr5 119459329 119459728 -80170422 + MER50 LTR ERV1 10 436 -298 340 320 91 32 chr5 119459895 119460114 -80170036 + L1M4b LINE L1 1 232 -6627 770 157 17 23 chr5 119460116 119460288 -80169862 - MER53 DNA DNA 0 189 19 2021 183 40 5 chr5 119460864 119461285 -80168865 - L1PA16 LINE L1 -5 6161 5726 247 256 63 63 chr5 119461386 119461418 -80168732 + L1M4b LINE L1 2764 2795 -4164 2265 97 3 0 chr5 119461418 119461708 -80168442 + AluY SINE Alu 1 291 -20 247 256 63 63 chr5 119461708 119461913 -80168237 + L1M4b LINE L1 2794 2955 -4004 432 204 74 6 chr5 119462028 119462190 -80167960 - HAL1b LINE L1 -235 1113 941 357 314 19 6 chr5 119462193 119462349 -80167801 + (TG)n Simple_repeat Simple_repeat 1 158 0 333 281 86 45 chr5 119462430 119462697 -80167453 - HAL1b LINE L1 -847 501 224 268 324 47 6 chr5 119462821 119462991 -80167159 - L1M4 LINE L1 -2258 3888 3712 18247 38 0 0 chr5 119463061 119466061 -80164089 + L1PA4 LINE L1 3154 6152 -3 229 313 65 14 chr5 119466275 119466489 -80163661 - L1M4 LINE L1 -2677 3469 3245 758 206 191 13 chr5 119467793 119468118 -80162032 + LTR50 LTR ERVL 16 442 -353 762 307 76 28 chr5 119469550 119469973 -80160177 - L2 LINE L2 -8 3305 2863 267 356 87 13 chr5 119471430 119471579 -80158571 - L2 LINE L2 -2 3311 3152 272 83 21 0 chr5 119472253 119472301 -80157849 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 382 308 99 12 chr5 119472305 119472477 -80157673 + MIR SINE MIR 61 247 -15 21 71 0 0 chr5 119472542 119472584 -80157566 + AT_rich Low_complexity Low_complexity 1 42 0 5776 115 32 0 chr5 119472587 119473886 -80156264 - L1PA15 LINE L1 -6 6159 4850 3894 223 55 18 chr5 119474194 119476292 -80153858 + L1MCa LINE L1 3 2438 -4307 215 343 29 0 chr5 119476493 119476595 -80153555 + MIR SINE MIR 99 203 -59 2224 112 0 0 chr5 119477857 119478152 -80151998 - AluY SINE Alu -16 295 1 4487 172 55 3 chr5 119480482 119481226 -80148924 + LTR39 LTR ERV1 1 783 0 4732 185 35 13 chr5 119481501 119482345 -80147805 - MER21B LTR ERV1 0 863 1 28 0 0 0 chr5 119482452 119482480 -80147670 + AT_rich Low_complexity Low_complexity 1 28 0 423 0 0 0 chr5 119482568 119482615 -80147535 + (TG)n Simple_repeat Simple_repeat 1 47 0 941 227 22 0 chr5 119483095 119483280 -80146870 + MER5A DNA MER1_type 1 189 0 357 318 42 28 chr5 119483281 119483495 -80146655 + MIR SINE MIR 10 226 -36 286 288 75 62 chr5 119483498 119483554 -80146596 - MIR SINE MIR -65 197 143 774 213 0 41 chr5 119483554 119483751 -80146399 + MER53 DNA DNA 1 189 0 286 288 75 62 chr5 119483751 119483854 -80146296 - MIR SINE MIR -119 143 36 1518 184 83 7 chr5 119484159 119484447 -80145703 - AluJo SINE Alu -2 310 1 2870 134 47 39 chr5 119484477 119485171 -80144979 + MER51A LTR ERV1 1 625 -9 1113 185 56 56 chr5 119485194 119485481 -80144669 + MER51A-int LTR ERV1 1 287 -7529 * 1330 212 26 86 chr5 119485465 119485814 -80144336 + MER51A-int LTR ERV1 225 502 -4378 2975 308 53 48 chr5 119486494 119488720 -80141430 + MER51A-int LTR ERV1 3295 5354 -2402 2066 45 0 8 chr5 119488720 119488966 -80141184 + L1PA4 LINE L1 5912 6155 0 2975 308 53 48 chr5 119488966 119489689 -80140461 + MER51A-int LTR ERV1 5354 6072 -1684 1990 165 9 3 chr5 119489840 119490167 -80139983 + MER51A-int LTR ERV1 7487 7815 -1 3658 127 86 38 chr5 119490170 119490775 -80139375 + MER51A LTR ERV1 1 634 0 23 0 0 0 chr5 119491069 119491092 -80139058 + AT_rich Low_complexity Low_complexity 1 23 0 232 265 20 82 chr5 119492247 119492270 -80137880 + MLT1J2 LTR MaLR 67 90 -360 1994 145 3 3 chr5 119492270 119492566 -80137584 - AluJb SINE Alu -16 296 1 232 265 20 82 chr5 119492566 119492640 -80137510 + MLT1J2 LTR MaLR 90 158 -292 365 261 76 17 chr5 119492747 119492866 -80137284 + MLT1I LTR MaLR 277 402 -7 1347 240 52 55 chr5 119493055 119493236 -80136914 + MER39 LTR ERV1 1 181 -526 2180 132 27 48 chr5 119493236 119493608 -80136542 - THE1B LTR MaLR 0 364 1 11967 95 19 7 chr5 119493608 119495170 -80134980 - THE1B-int LTR MaLR 0 1580 1 2211 134 21 46 chr5 119495170 119495543 -80134607 - THE1B LTR MaLR 0 364 1 1347 240 52 55 chr5 119495543 119495874 -80134276 + MER39 LTR ERV1 178 698 -9 506 258 129 47 chr5 119496059 119496377 -80133773 - MER34B LTR ERV1 -3 562 219 3929 180 22 18 chr5 119496846 119497014 -80133136 - LTR39 LTR ERV1 0 783 617 1773 150 36 0 chr5 119497014 119497288 -80132862 - AluJb SINE Alu -18 294 11 3929 180 22 18 chr5 119497288 119497841 -80132309 - LTR39 LTR ERV1 -166 617 59 247 175 123 0 chr5 119497947 119498004 -80132146 - LTR39 LTR ERV1 -718 65 2 22 0 0 0 chr5 119498652 119498674 -80131476 + AT_rich Low_complexity Low_complexity 1 22 0 267 175 0 0 chr5 119499232 119499289 -80130861 + (CCTA)n Simple_repeat Simple_repeat 3 59 0 778 152 38 8 chr5 119499289 119499421 -80130729 - MLT1C LTR MaLR 0 467 332 1304 198 14 102 chr5 119499442 119499805 -80130345 + MLT1A1 LTR MaLR 35 365 0 742 203 0 0 chr5 119499805 119499938 -80130212 - MLT1C LTR MaLR -134 333 201 603 288 52 26 chr5 119500329 119500810 -80129340 + L1MEd LINE L1 1050 1593 -4717 347 326 130 14 chr5 119501064 119501202 -80128948 + MIR3 SINE MIR 15 168 -40 210 128 0 0 chr5 119502558 119502597 -80127553 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2311 98 0 3 chr5 119502726 119503032 -80127118 - AluSc SINE Alu -4 305 1 2634 229 34 46 chr5 119503041 119504328 -80125822 - L1ME3 LINE L1 -1 6161 4776 928 215 232 3 chr5 119504433 119504773 -80125377 + LTR50 LTR ERVL 1 418 -377 235 281 56 19 chr5 119504773 119504933 -80125217 + LTR50 LTR ERVL 526 691 -104 5347 128 61 11 chr5 119505186 119506037 -80124113 - MER4D LTR ERV1 -9 894 1 2073 117 16 31 chr5 119506908 119507225 -80122925 + AluSx SINE Alu 1 312 0 446 334 131 16 chr5 119507257 119507760 -80122390 + L1M4 LINE L1 4487 5047 -1099 27 62 0 0 chr5 119507835 119507883 -80122267 + AT_rich Low_complexity Low_complexity 1 48 0 1146 184 28 23 chr5 119507991 119508209 -80121941 + MER20 DNA MER1_type 1 219 0 2491 54 30 0 chr5 119508275 119508572 -80121578 + AluY SINE Alu 1 306 -5 4269 133 102 26 chr5 119508601 119509991 -80120159 + pTR5 LTR ERV1 741 2606 0 310 268 64 80 chr5 119510591 119510841 -80119309 + L1M4 LINE L1 3742 3987 -2159 226 230 79 48 chr5 119511515 119511556 -80118594 - L1MA9 LINE L1 -2 6310 6270 3298 186 38 40 chr5 119511556 119512264 -80117886 - L1ME1 LINE L1 -46 6120 5414 329 200 44 22 chr5 119512262 119512352 -80117798 + L1MC4a LINE L1 7150 7241 -567 * 633 236 91 30 chr5 119513746 119513945 -80116205 - MIR SINE MIR -49 213 3 2239 278 68 6 chr5 119514690 119515375 -80114775 - L1MEc LINE L1 -5605 791 57 1728 140 143 54 chr5 119515375 119515710 -80114440 + MLT1A1 LTR MaLR 1 365 0 2239 278 68 6 chr5 119515710 119515748 -80114402 - L1MEc LINE L1 -6339 57 23 247 401 24 35 chr5 119515754 119516041 -80114109 + L2 LINE L2 2892 3175 -97 1785 220 22 54 chr5 119517174 119517678 -80112472 - MLT1D LTR MaLR -17 488 1 224 311 0 0 chr5 119519309 119519370 -80110780 + GA-rich Low_complexity Low_complexity 3 63 0 196 179 75 60 chr5 119519705 119519772 -80110378 + MIR SINE MIR 102 169 -93 494 269 66 15 chr5 119522528 119522725 -80107425 - MIR3 SINE MIR -1 207 1 2080 128 55 68 chr5 119523619 119523986 -80106164 - THE1B LTR MaLR -2 362 1 886 147 35 30 chr5 119524108 119524288 -80105862 + L1MA7 LINE L1 5901 6087 -213 1247 158 38 8 chr5 119524318 119524558 -80105592 + L1MA7 LINE L1 6043 6289 -2 593 329 43 4 chr5 119524664 119524895 -80105255 - MIR SINE MIR -18 244 5 724 176 17 25 chr5 119525164 119525309 -80104841 - FLAM_A SINE Alu 0 146 3 329 268 62 0 chr5 119525873 119525970 -80104180 + MIR SINE MIR 160 262 0 290 303 138 0 chr5 119526000 119526109 -80104041 + MIR SINE MIR 47 170 -92 562 279 0 14 chr5 119526433 119526580 -80103570 - MLT1E LTR MaLR -448 145 1 583 226 226 45 chr5 119526890 119527111 -80103039 + MIR SINE MIR 2 262 0 268 321 136 0 chr5 119527230 119527370 -80102780 - L2 LINE L2 -819 2495 2337 452 233 7 80 chr5 119527431 119527581 -80102569 + L2 LINE L2 3175 3313 0 2491 79 0 0 chr5 119528187 119528490 -80101660 + AluY SINE Alu 1 303 -8 24 53 0 0 chr5 119531065 119531103 -80099047 + AT_rich Low_complexity Low_complexity 1 38 0 851 255 61 5 chr5 119531270 119531546 -80098604 - MER110A LTR ERV1 0 468 207 674 239 54 50 chr5 119531771 119532030 -80098120 - L1MC4a LINE L1 -1837 5971 5712 1676 114 4 0 chr5 119532057 119532303 -80097847 + Tigger1 DNA MER2_type 2 248 -2170 263 264 132 11 chr5 119535172 119535263 -80094887 - L2 LINE L2 -21 3292 3191 2149 149 62 11 chr5 119535348 119535785 -80094365 - L1MB4 LINE L1 0 6180 5722 2229 46 4 0 chr5 119535791 119536050 -80094100 - AluY SINE Alu -15 296 37 3993 166 53 8 chr5 119536815 119537020 -80093130 + LTR39 LTR ERV1 2 196 -587 2137 103 33 3 chr5 119537020 119537320 -80092830 - AluSc SINE Alu 0 309 1 3993 166 53 8 chr5 119537320 119537862 -80092288 + LTR39 LTR ERV1 196 783 0 304 351 54 7 chr5 119538333 119538481 -80091669 + MER57-int LTR ERV1 1434 1588 -5949 630 116 163 8 chr5 119538508 119538637 -80091513 + MER57-int LTR ERV1 939 1087 -5244 369 281 23 31 chr5 119539116 119539244 -80090906 + MIR3 SINE MIR 15 141 -67 2499 237 80 26 chr5 119539794 119540755 -80089395 - Charlie2 DNA MER1_type 0 2862 1850 187 229 42 0 chr5 119540831 119540851 -80089299 - L3 LINE CR1 -444 1133 1112 364 211 13 13 chr5 119540851 119540927 -80089223 + MER5A DNA MER1_type 1 76 -113 2447 69 0 0 chr5 119540927 119541233 -80088917 + AluY SINE Alu 1 306 -5 2965 144 4 0 chr5 119541238 119541749 -80088401 - L1M2 LINE L1 -568 5723 5212 3347 189 53 1 chr5 119542706 119543388 -80086762 + LTR62 LTR ERVK 1 717 -2 261 0 0 0 chr5 119544241 119544270 -80085880 + (A)n Simple_repeat Simple_repeat 1 29 0 468 221 122 8 chr5 119545400 119545531 -80084619 - MER69 DNA AcHobo -2380 146 1 3679 158 2 6 chr5 119545983 119546618 -80083532 - L1M2 LINE L1 -957 5189 4558 2993 146 35 5 chr5 119546618 119547178 -80082972 + L1MA7 LINE L1 5706 6290 -1 677 225 8 0 chr5 119547182 119547311 -80082839 + MER5A DNA MER1_type 60 189 0 263 292 133 25 chr5 119547532 119547652 -80082498 - MER5A DNA MER1_type -1 188 56 220 345 86 29 chr5 119547533 119547672 -80082478 + MER5A DNA MER1_type 17 163 -26 * 1309 207 154 51 chr5 119548096 119548647 -80081503 - L1M4 LINE L1 -1640 4506 3899 1904 84 98 18 chr5 119549566 119549840 -80080310 - AluSx SINE Alu -16 296 1 409 202 115 29 chr5 119550918 119551022 -80079128 - MIR SINE MIR -113 149 37 450 265 68 8 chr5 119552512 119552629 -80077521 - LTR16A LTR ERVL -257 193 70 645 197 24 8 chr5 119553285 119553412 -80076738 + FRAM SINE Alu 1 129 -47 2382 159 13 34 chr5 119553940 119554411 -80075739 - MER65C LTR ERV1 0 461 1 1471 226 42 100 chr5 119554620 119555270 -80074880 + LTR9 LTR ERV1 1 612 0 1374 171 51 100 chr5 119556163 119556654 -80073496 - L1MA9 LINE L1 -9 6303 5837 893 168 101 19 chr5 119556655 119556863 -80073287 - L1MA8 LINE L1 -177 6114 5890 194 194 0 0 chr5 119557088 119557124 -80073026 - L2 LINE L2 -3 3310 3275 2086 133 10 0 chr5 119557420 119557729 -80072421 + AluSq SINE Alu 1 312 -1 207 0 0 0 chr5 119557736 119557759 -80072391 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2246 153 53 17 chr5 119557853 119558266 -80071884 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr5 119558443 119558467 -80071683 + AT_rich Low_complexity Low_complexity 1 24 0 238 364 30 8 chr5 119559240 119559372 -80070778 + HAL1b LINE L1 245 379 -969 506 254 61 50 chr5 119559506 119559786 -80070364 + HAL1b LINE L1 505 787 -561 1222 171 0 0 chr5 119559982 119560187 -80069963 - L1M1 LINE L1 -545 5937 5733 231 298 79 0 chr5 119560228 119560342 -80069808 - MIR SINE MIR -3 259 137 7728 22 0 47 chr5 119560368 119561610 -80068540 - L1PA4 LINE L1 -5 6150 4932 2058 109 7 0 chr5 119561615 119561890 -80068260 - AluY SINE Alu -34 277 1 2378 167 21 19 chr5 119561891 119561934 -80068216 - L1M1 LINE L1 -735 5565 5524 3671 103 0 8 chr5 119561934 119562449 -80067701 + MER9 LTR ERVK 1 511 0 2378 167 21 19 chr5 119562449 119563072 -80067078 - L1M1 LINE L1 -776 5524 4897 9082 162 20 119 chr5 119563173 119563925 -80066225 - L1M1 LINE L1 -1095 5233 4408 2023 59 4 0 chr5 119563925 119564178 -80065972 + L1PA3 LINE L1 5897 6153 -2 9082 162 20 119 chr5 119564178 119565435 -80064715 - L1M1 LINE L1 -1920 4408 3397 197 32 0 32 chr5 119565444 119565475 -80064675 + (TTAA)n Simple_repeat Simple_repeat 2 31 0 711 200 0 7 chr5 119565475 119565600 -80064550 - AluJo SINE Alu -186 126 1 9082 162 20 119 chr5 119565600 119566092 -80064058 - L1M1 LINE L1 -2931 3397 2858 7533 166 13 17 chr5 119566088 119566973 -80063177 - L1M1 LINE L1 -4065 1263 706 * 2170 132 0 3 chr5 119566973 119567284 -80062866 - AluSx SINE Alu 0 312 3 7533 166 13 17 chr5 119567284 119567983 -80062167 - L1M1 LINE L1 -4622 706 6 768 307 72 27 chr5 119568465 119569109 -80061041 + L1ME3A LINE L1 5259 5939 -231 374 299 155 14 chr5 119570511 119570718 -80059432 + MIR SINE MIR 1 236 -26 474 65 0 0 chr5 119571089 119571151 -80058999 + (TCCA)n Simple_repeat Simple_repeat 4 65 0 548 264 79 49 chr5 119573076 119573523 -80056627 - LTR33 LTR ERVL -2 519 1 306 306 9 18 chr5 119574014 119574125 -80056025 - MIR SINE MIR -79 129 20 3946 169 60 3 chr5 119574719 119575400 -80054750 - MER54A LTR ERVL 0 901 182 32 91 0 0 chr5 119575500 119575588 -80054562 + AT_rich Low_complexity Low_complexity 1 88 0 201 326 98 5 chr5 119576122 119576337 -80053813 + L2 LINE L2 1984 2218 -1096 22 56 0 0 chr5 119576360 119576396 -80053754 + AT_rich Low_complexity Low_complexity 1 36 0 2280 81 0 7 chr5 119576404 119576729 -80053421 - AluY SINE Alu 0 323 1 312 269 77 0 chr5 119576846 119576924 -80053226 - L2 LINE L2 0 3272 3189 286 267 0 0 chr5 119577005 119577065 -80053085 - MLT1J2 LTR MaLR -37 413 354 1372 302 94 50 chr5 119577296 119578435 -80051715 - L2 LINE L2 -257 3056 1869 320 343 66 40 chr5 119578814 119579117 -80051033 + L3b LINE CR1 1132 1442 -141 216 300 29 0 chr5 119580746 119580816 -80049334 + L2 LINE L2 3201 3272 0 202 307 92 18 chr5 119580945 119581108 -80049042 + L3 LINE CR1 781 955 -622 503 274 63 35 chr5 119581115 119581370 -80048780 - MIR SINE MIR 0 262 1 182 353 49 33 chr5 119581623 119581745 -80048405 - MIR SINE MIR -119 143 20 194 410 56 11 chr5 119581795 119581973 -80048177 - MIR3 SINE MIR -6 202 17 4731 151 11 14 chr5 119584926 119585815 -80044335 - L1MB3 LINE L1 -1 6418 5532 1287 226 40 28 chr5 119585788 119586319 -80043831 - L1MB3 LINE L1 -2555 3827 3291 * 2068 121 12 15 chr5 119586321 119586652 -80043498 + THE1C LTR MaLR 1 330 -45 10049 126 35 7 chr5 119586653 119588189 -80041961 + THE1C-int LTR MaLR 2 1580 0 2292 124 24 14 chr5 119588189 119588560 -80041590 + THE1C LTR MaLR 1 375 0 11062 191 48 53 chr5 119588563 119589046 -80041104 - L1MB3 LINE L1 -3092 3290 2806 1603 134 42 114 chr5 119589046 119589450 -80040700 + THE1C LTR MaLR 1 375 0 11062 191 48 53 chr5 119589450 119589722 -80040428 - L1MB3 LINE L1 -3576 2806 2534 759 22 0 0 chr5 119589722 119589811 -80040339 + (TTTC)n Simple_repeat Simple_repeat 1 89 0 1735 173 33 0 chr5 119589811 119590082 -80040068 - AluSx SINE Alu -32 280 1 11062 191 48 53 chr5 119590082 119592453 -80037697 - L1MB3 LINE L1 -3847 2535 178 2146 126 3 0 chr5 119592453 119592746 -80037404 + AluSq SINE Alu 5 298 -15 11062 191 48 53 chr5 119592746 119592909 -80037241 - L1MB3 LINE L1 -6204 178 16 299 282 55 6 chr5 119593041 119593222 -80036928 + L1MEd LINE L1 895 1084 -5035 272 300 95 57 chr5 119594215 119594425 -80035725 - MLT1H LTR MaLR -207 342 125 347 232 125 54 chr5 119595501 119595669 -80034481 + MLT1K LTR MaLR 345 524 -64 283 185 152 11 chr5 119595734 119595826 -80034324 - Zaphod DNA AcHobo -77 3954 3850 * 389 145 26 0 chr5 119595822 119595898 -80034252 - Zaphod DNA AcHobo -1145 2886 2809 688 318 124 3 chr5 119596334 119596664 -80033486 - MER115 DNA AcHobo -300 393 24 999 145 0 0 chr5 119596691 119596863 -80033287 + (TCCCC)n Simple_repeat Simple_repeat 5 176 0 432 0 0 0 chr5 119596862 119596910 -80033240 + (TTCTC)n Simple_repeat Simple_repeat 3 50 0 * 1731 97 15 19 chr5 119596914 119597173 -80032977 - L1PA10 LINE L1 -16 6152 5895 2087 122 14 7 chr5 119597698 119597992 -80032158 + AluSx SINE Alu 1 296 -16 245 320 48 14 chr5 119599104 119599295 -80030855 - MER20B DNA MER1_type -17 202 6 236 225 7 72 chr5 119599431 119599569 -80030581 + (TTATA)n Simple_repeat Simple_repeat 4 132 0 1172 289 81 33 chr5 119600775 119601231 -80028919 + L2 LINE L2 2836 3313 0 336 248 75 45 chr5 119601851 119602071 -80028079 + L1ME LINE L1 5616 5842 -279 369 331 75 32 chr5 119602153 119602432 -80027718 - L1M4 LINE L1 -1630 4516 4227 210 227 0 0 chr5 119603878 119603922 -80026228 + L2 LINE L2 3270 3313 0 443 167 0 13 chr5 119605053 119605131 -80025019 + Tigger2 DNA MER2_type 1 77 -2641 680 227 5 74 chr5 119605147 119605350 -80024800 - MER8 DNA MER2_type -50 189 1 212 57 0 29 chr5 119605574 119605609 -80024541 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 710 196 0 36 chr5 119605637 119605775 -80024375 + FLAM_A SINE Alu 1 133 0 711 222 90 5 chr5 119605873 119606062 -80024088 - L2 LINE L2 -1613 1701 1497 301 325 75 10 chr5 119606248 119606448 -80023702 - MLT1J2 LTR MaLR -237 213 1 562 289 139 0 chr5 119606448 119606656 -80023494 - L2 LINE L2 -1813 1501 1265 719 277 18 22 chr5 119606728 119606952 -80023198 - MLT2E LTR ERVL -400 228 6 513 219 160 43 chr5 119606955 119607142 -80023008 + L2 LINE L2 3105 3313 0 245 297 16 0 chr5 119608114 119608178 -80021972 + MER5B DNA MER1_type 63 127 -51 183 42 0 0 chr5 119609089 119609113 -80021037 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 676 286 212 9 chr5 119609152 119609712 -80020438 - L2 LINE L2 -42 3271 2599 859 361 52 13 chr5 119609809 119610484 -80019666 - ERVL LTR ERVL -2118 3646 2946 411 239 11 0 chr5 119610604 119610696 -80019454 + MER58A DNA MER1_type 47 139 0 681 298 47 59 chr5 119610949 119611358 -80018792 + L1M4 LINE L1 3105 3508 -2638 2044 126 3 17 chr5 119611422 119611723 -80018427 - AluY SINE Alu -14 297 1 452 281 106 36 chr5 119611797 119612071 -80018079 - L1MEd LINE L1 -5559 1388 1096 343 263 105 0 chr5 119612970 119613103 -80017047 - L1MC4 LINE L1 0 8042 7896 226 272 78 63 chr5 119613389 119613595 -80016555 - L1ME LINE L1 -372 5749 5541 281 307 139 0 chr5 119614035 119614338 -80015812 - L1ME LINE L1 -924 5222 4878 356 306 87 31 chr5 119614393 119614589 -80015561 - L1ME LINE L1 -1367 4779 4573 243 337 30 0 chr5 119615275 119615376 -80014774 - MIR3 SINE MIR -7 201 98 427 310 164 36 chr5 119615616 119616110 -80014040 + L2 LINE L2 2148 2704 -610 394 203 138 43 chr5 119616111 119616249 -80013901 - L1MEd LINE L1 -5493 1366 1216 336 103 0 0 chr5 119616290 119616348 -80013802 + (TTTAA)n Simple_repeat Simple_repeat 3 60 0 1685 288 104 36 chr5 119616854 119617681 -80012469 - L1MEd LINE L1 -5927 932 50 1328 52 17 0 chr5 119618295 119618468 -80011682 + L1PA4 LINE L1 5980 6155 0 1224 241 110 24 chr5 119619205 119619452 -80010698 + MLT1J LTR MaLR 8 232 -279 2395 91 3 0 chr5 119619452 119619760 -80010390 - AluY SINE Alu -2 309 1 1224 241 110 24 chr5 119619760 119619931 -80010219 + MLT1J LTR MaLR 232 462 -49 290 185 11 43 chr5 119620121 119620213 -80009937 - L1MA10 LINE L1 -18 6316 6228 232 208 0 0 chr5 119620402 119620450 -80009700 - L1MB8 LINE L1 -185 5993 5946 767 228 46 5 chr5 119620462 119620681 -80009469 - L1MB8 LINE L1 -351 5815 5588 3001 257 38 21 chr5 119620687 119622087 -80008063 + L1M3c LINE L1 1 1478 -4733 1348 226 111 17 chr5 119622087 119622449 -80007701 + MSTD LTR MaLR 1 396 0 3001 257 38 21 chr5 119622449 119623028 -80007122 + L1M3c LINE L1 1478 2046 -4165 377 217 33 82 chr5 119623030 119623108 -80007042 - L1MB8 LINE L1 -2147 3999 3919 2310 71 0 61 chr5 119623108 119623434 -80006716 - AluY SINE Alu -5 306 1 377 217 33 82 chr5 119623434 119623539 -80006611 - L1MB8 LINE L1 -2227 3919 3825 3435 79 10 6 chr5 119623674 119624574 -80005576 - L1PB4 LINE L1 -331 5825 4894 12518 98 2 1 chr5 119624586 119626411 -80003739 - L1P3 LINE L1 -4644 1807 1 1117 233 50 82 chr5 119626433 119626456 -80003694 - MER77 LTR ERV1 -218 387 365 950 247 84 71 chr5 119626456 119626990 -80003160 + MER34 LTR ERV1 1 541 -1 1117 233 50 82 chr5 119626990 119627366 -80002784 - MER77 LTR ERV1 -240 365 1 2200 135 0 0 chr5 119627583 119627894 -80002256 + AluSq SINE Alu 1 311 -2 409 149 14 14 chr5 119627968 119628042 -80002108 + AluSq/x SINE Alu 63 136 -177 883 463 0 27 chr5 119628042 119628336 -80001814 + AluSx SINE Alu 2 287 -15 204 67 0 0 chr5 119628336 119628366 -80001784 + (CCAA)n Simple_repeat Simple_repeat 1 30 0 2472 58 37 0 chr5 119628384 119628709 -80001441 + L1PA7 LINE L1 5814 6150 -4 971 217 57 4 chr5 119628808 119629038 -80001112 + MER77 LTR ERV1 362 603 -2 523 191 100 0 chr5 119629357 119629467 -80000683 - MER103 DNA DNA -43 123 3 256 247 56 11 chr5 119630286 119630375 -79999775 - MER68 LTR ERV1 -467 95 3 264 313 69 38 chr5 119630870 119631001 -79999149 + L2 LINE L2 3133 3267 -5 28 48 0 0 chr5 119631021 119631063 -79999087 + AT_rich Low_complexity Low_complexity 1 42 0 28 48 0 0 chr5 119631168 119631210 -79998940 + AT_rich Low_complexity Low_complexity 1 42 0 22131 29 4 0 chr5 119631252 119634693 -79995457 - L1PA4 LINE L1 0 6155 2705 682 158 97 6 chr5 119635233 119635398 -79994752 - MER45B DNA AcHobo -162 878 699 2491 70 0 0 chr5 119635563 119635863 -79994287 - AluY SINE Alu -11 300 1 208 310 11 11 chr5 119636129 119636216 -79993934 + MIR SINE MIR 141 227 -35 287 128 0 0 chr5 119636541 119636582 -79993568 - MLT2B3 LTR ERVL 0 554 514 243 88 0 0 chr5 119636582 119636616 -79993534 + (TG)n Simple_repeat Simple_repeat 1 34 0 259 163 0 76 chr5 119636642 119636734 -79993416 + (TA)n Simple_repeat Simple_repeat 1 85 0 2363 177 20 91 chr5 119636774 119637343 -79992807 - MLT2B3 LTR ERVL -38 508 1 198 322 116 25 chr5 119637880 119638001 -79992149 - L2 LINE L2 -4 3268 3137 2215 136 10 49 chr5 119638160 119638330 -79991820 + MLT1B LTR MaLR 17 192 -198 2200 114 10 0 chr5 119638330 119638636 -79991514 + AluSc SINE Alu 1 309 0 2215 136 10 49 chr5 119638636 119638854 -79991296 + MLT1B LTR MaLR 192 390 0 374 252 26 0 chr5 119638866 119638981 -79991169 - L1MEd LINE L1 -5992 127 10 276 315 90 0 chr5 119639077 119639188 -79990962 + MIR SINE MIR 31 151 -57 1928 87 54 36 chr5 119639190 119639467 -79990683 + AluSx SINE Alu 1 282 -30 198 0 0 0 chr5 119640435 119640457 -79989693 + (A)n Simple_repeat Simple_repeat 1 22 0 2122 98 28 3 chr5 119640697 119640983 -79989167 + AluY SINE Alu 1 293 -18 555 270 159 13 chr5 119641461 119641687 -79988463 + MLT1K LTR MaLR 258 516 -72 378 0 0 0 chr5 119641710 119641752 -79988398 + (CA)n Simple_repeat Simple_repeat 2 43 0 472 255 19 33 chr5 119641817 119641955 -79988195 - MIR3 SINE MIR -54 154 15 2659 94 58 19 chr5 119642242 119642629 -79987521 + MLT2A1 LTR ERVL 1 408 -36 519 17 0 0 chr5 119642629 119642689 -79987461 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 2659 94 58 19 chr5 119642689 119642728 -79987422 + MLT2A1 LTR ERVL 408 444 0 195 42 0 0 chr5 119642913 119642937 -79987213 + (CA)n Simple_repeat Simple_repeat 2 25 0 442 226 149 36 chr5 119643062 119643230 -79986920 - MER115 DNA AcHobo -67 626 440 235 287 43 32 chr5 119643510 119643604 -79986546 - MER115 DNA AcHobo -521 172 78 259 338 99 7 chr5 119644368 119644510 -79985640 - MIR3 SINE MIR -45 163 9 23 33 0 0 chr5 119644752 119644782 -79985368 + AT_rich Low_complexity Low_complexity 1 30 0 330 311 66 52 chr5 119645796 119646008 -79984142 - MIR SINE MIR -25 237 23 25 0 0 0 chr5 119646299 119646324 -79983826 + AT_rich Low_complexity Low_complexity 1 25 0 515 235 103 23 chr5 119646449 119646678 -79983472 - MIR SINE MIR -1 261 18 2016 136 0 10 chr5 119646796 119647104 -79983046 - AluSx SINE Alu -7 305 1 1535 195 128 31 chr5 119647333 119647546 -79982604 - MSTA LTR MaLR 0 428 237 1998 85 66 4 chr5 119647546 119647818 -79982332 - AluSg1 SINE Alu -18 291 3 1535 195 128 31 chr5 119647818 119647994 -79982156 - MSTA LTR MaLR -191 237 1 261 0 0 0 chr5 119648147 119648176 -79981974 + (A)n Simple_repeat Simple_repeat 1 29 0 2476 182 28 19 chr5 119648837 119649305 -79980845 - MER70A LTR ERVL 0 472 1 957 216 112 42 chr5 119649811 119650203 -79979947 + MER21B LTR ERV1 475 900 -31 2977 264 48 7 chr5 119650376 119651781 -79978369 - L1MEc LINE L1 -2383 3832 2326 2318 91 0 0 chr5 119651781 119652077 -79978073 - AluY SINE Alu -15 296 1 2370 264 54 11 chr5 119652092 119652796 -79977354 - L1MEc LINE L1 -5411 985 252 686 303 75 29 chr5 119652804 119653151 -79976999 - LTR16B LTR ERVL -12 452 90 452 303 42 0 chr5 119653354 119653473 -79976677 - L2 LINE L2 -3 3269 3146 291 289 99 39 chr5 119655069 119655287 -79974863 - L2 LINE L2 -271 3001 2773 732 308 16 0 chr5 119655347 119655532 -79974618 - MIR SINE MIR -41 221 34 328 304 73 63 chr5 119655546 119655742 -79974408 - L2 LINE L2 -565 2749 2548 2305 72 0 7 chr5 119655742 119656032 -79974118 - AluY SINE Alu -13 298 11 328 304 73 63 chr5 119656032 119656121 -79974029 - L2 LINE L2 -766 2548 2461 620 235 140 10 chr5 119657007 119657207 -79972943 + L1ME LINE L1 5555 5780 -390 1188 241 91 10 chr5 119657223 119657952 -79972198 + L1ME LINE L1 4832 5609 -555 267 352 22 11 chr5 119657948 119658127 -79972023 - L1M4 LINE L1 -1975 4171 3991 * 5806 127 3 16 chr5 119658161 119659082 -79971068 - L1PA13 LINE L1 -1 6162 5254 932 164 11 0 chr5 119659099 119659282 -79970868 + L1PA13 LINE L1 5047 5231 -915 5532 165 32 17 chr5 119659335 119660949 -79969201 - L1MA4 LINE L1 -9 6291 4664 274 267 43 65 chr5 119660981 119661213 -79968937 - L1M4 LINE L1 -2214 3932 3706 340 249 153 4 chr5 119661544 119661785 -79968365 + L1M4 LINE L1 4550 4826 -1320 415 326 64 32 chr5 119662075 119662293 -79967857 - LTR16C LTR ERVL -188 303 79 351 333 99 12 chr5 119662912 119663083 -79967067 + MIR SINE MIR 11 196 -66 809 241 75 0 chr5 119664064 119664263 -79965887 - LTR16A LTR ERVL 0 450 237 1138 140 42 23 chr5 119664506 119664720 -79965430 + MER96B DNA MER1_type? 10 227 -190 268 269 166 35 chr5 119664871 119665016 -79965134 - MLT1K LTR MaLR -10 578 415 27 49 0 0 chr5 119665573 119665614 -79964536 + AT_rich Low_complexity Low_complexity 1 41 0 472 230 70 38 chr5 119665743 119665956 -79964194 - L1MC4a LINE L1 -1921 5956 5737 324 297 81 11 chr5 119666301 119666658 -79963492 - L1MC4a LINE L1 -1441 4774 4344 27 49 0 0 chr5 119667044 119667085 -79963065 + AT_rich Low_complexity Low_complexity 1 41 0 262 295 56 38 chr5 119667217 119667505 -79962645 - L1M4 LINE L1 -1538 4608 4316 * 414 271 29 0 chr5 119667496 119667666 -79962484 - L1MC4a LINE L1 -5066 1152 978 234 323 8 8 chr5 119667668 119667792 -79962358 - L1MC4a LINE L1 -5483 913 790 310 329 6 37 chr5 119669079 119669243 -79960907 - HAL1b LINE L1 -758 590 432 351 190 4 59 chr5 119669417 119669649 -79960501 + AluJo SINE Alu 1 282 -20 1664 262 111 66 chr5 119669653 119669866 -79960284 - HAL1b LINE L1 -5 1343 1141 2054 96 14 7 chr5 119669866 119670173 -79959977 - AluSc SINE Alu 0 309 1 2129 125 3 0 chr5 119670175 119670470 -79959680 - AluSq SINE Alu -17 296 1 1664 262 111 66 chr5 119670470 119670818 -79959332 - HAL1b LINE L1 -207 1141 810 1777 168 3 3 chr5 119670818 119671110 -79959040 - AluJo SINE Alu -20 292 1 1664 262 111 66 chr5 119671110 119671762 -79958388 - HAL1b LINE L1 -538 810 70 1069 268 166 30 chr5 119672103 119672562 -79957588 - LTR33 LTR ERVL 0 521 1 2100 124 7 0 chr5 119673927 119674218 -79955932 - AluSg SINE Alu -17 293 1 777 249 51 0 chr5 119674247 119674484 -79955666 - L1MA9 LINE L1 -38 6274 6026 662 270 65 93 chr5 119675297 119675653 -79954497 + L2 LINE L2 2967 3312 -1 384 59 0 0 chr5 119675658 119675709 -79954441 + (GGAA)n Simple_repeat Simple_repeat 1 51 0 469 313 108 37 chr5 119676042 119676712 -79953438 + L2 LINE L2 1922 2638 -676 2473 266 124 34 chr5 119677157 119678149 -79952001 - L2 LINE L2 -714 2600 1520 231 212 30 30 chr5 119678286 119678352 -79951798 - L1MC4a LINE L1 -5846 359 294 207 390 37 0 chr5 119679413 119679549 -79950601 - L2 LINE L2 -568 2746 2606 32 35 0 18 chr5 119680256 119680295 -79949855 + AT_rich Low_complexity Low_complexity 1 40 -16 7563 30 0 0 chr5 119680295 119681920 -79948230 - L1PA3 LINE L1 -3 6152 4528 32 35 0 18 chr5 119681920 119681937 -79948213 + AT_rich Low_complexity Low_complexity 40 56 0 225 288 0 17 chr5 119682029 119682088 -79948062 - MIR SINE MIR -6 256 199 238 182 0 55 chr5 119682227 119682282 -79947868 + L2 LINE L2 3262 3313 0 524 334 101 33 chr5 119682515 119682910 -79947240 + L2 LINE L2 2811 3232 -81 1068 199 5 0 chr5 119683100 119683306 -79946844 - MER3 DNA MER1_type -1 208 2 300 290 84 56 chr5 119683354 119683568 -79946582 + L1 LINE L1 5102 5321 -825 253 358 51 0 chr5 119683843 119684019 -79946131 - L1MC4a LINE L1 -1884 5924 5740 420 261 47 99 chr5 119684020 119684231 -79945919 + MLT1L LTR MaLR 114 313 -302 808 151 12 35 chr5 119684257 119684429 -79945721 - L1MA4A LINE L1 -10 6293 6126 4327 150 23 39 chr5 119684429 119685666 -79944484 - L1MA4A LINE L1 -591 5712 4469 540 335 31 9 chr5 119685696 119685923 -79944227 + MLT1L LTR MaLR 384 615 0 3203 192 108 39 chr5 119685941 119686145 -79944005 - L1MD2 LINE L1 -4 6355 6166 225 65 0 0 chr5 119686145 119686176 -79943974 + (TG)n Simple_repeat Simple_repeat 2 32 0 3203 192 108 39 chr5 119686176 119686586 -79943564 - L1MD2 LINE L1 -193 6166 5786 216 67 0 0 chr5 119686586 119686616 -79943534 + (TG)n Simple_repeat Simple_repeat 2 31 0 3203 192 108 39 chr5 119686616 119686758 -79943392 - L1MD2 LINE L1 -573 5786 5655 2095 135 0 0 chr5 119686758 119687040 -79943110 + AluSx SINE Alu 10 291 -21 3203 192 108 39 chr5 119687040 119687154 -79942996 - L1MD2 LINE L1 -704 5655 5423 1981 261 43 16 chr5 119688078 119688637 -79941513 - MER90 LTR ERV1 0 575 2 441 282 144 67 chr5 119689066 119689163 -79940987 + MER102b DNA MER1_type 1 89 -1339 2390 82 0 0 chr5 119689163 119689467 -79940683 + AluY SINE Alu 3 306 -5 441 282 144 67 chr5 119689467 119689681 -79940469 + MER102b DNA MER1_type 89 336 -5 200 132 26 0 chr5 119689881 119689919 -79940231 + A-rich Low_complexity Low_complexity 3 41 0 233 158 0 0 chr5 119691240 119691278 -79938872 - MER116 DNA Mariner -40 40 3 450 302 100 55 chr5 119691278 119691788 -79938362 + L2 LINE L2 2271 2803 -511 780 214 0 19 chr5 119691960 119692114 -79938036 + FRAM SINE Alu 1 146 -30 478 255 89 89 chr5 119692189 119692460 -79937690 + MLT1J LTR MaLR 236 506 -5 641 235 104 6 chr5 119692814 119692997 -79937153 - L1ME1 LINE L1 -11 6155 5955 5005 166 35 15 chr5 119693090 119694250 -79935900 - L1MA7 LINE L1 -19 6272 5073 2071 146 0 0 chr5 119694250 119694544 -79935606 + AluSx SINE Alu 4 297 -15 5005 166 35 15 chr5 119694544 119694983 -79935167 - L1MA7 LINE L1 -1218 5073 4644 870 164 45 11 chr5 119695096 119695273 -79934877 - L1 LINE L1 -1350 4796 4614 2462 195 71 54 chr5 119695288 119695991 -79934159 - L1ME1 LINE L1 -194 5972 5258 560 253 7 20 chr5 119696005 119696151 -79933999 - L1ME LINE L1 -590 5576 5433 1369 159 25 35 chr5 119696155 119696438 -79933712 - L1MC3 LINE L1 -21 7764 7485 583 199 66 9 chr5 119696433 119696619 -79933531 - L1M3 LINE L1 -880 5454 5266 * 225 189 0 68 chr5 119696646 119696720 -79933430 + L1MCa LINE L1 1996 2064 -4362 778 222 11 68 chr5 119696732 119696834 -79933316 - L1M3 LINE L1 -880 5266 5160 6967 50 8 0 chr5 119696834 119698096 -79932054 - L1PA8 LINE L1 -6 6166 4909 778 222 11 68 chr5 119698096 119698272 -79931878 - L1M3 LINE L1 -986 5160 5004 490 339 28 6 chr5 119699180 119699360 -79930790 + MIR3 SINE MIR 19 202 -6 443 171 243 20 chr5 119699451 119699603 -79930547 - MER53 DNA DNA -2 187 2 25 31 0 0 chr5 119700957 119700989 -79929161 + AT_rich Low_complexity Low_complexity 1 32 0 290 306 27 41 chr5 119701267 119701414 -79928736 + L2 LINE L2 2552 2696 -618 591 235 48 114 chr5 119701496 119701917 -79928233 - LTR37B LTR ERV1 -45 423 31 366 292 149 64 chr5 119701934 119702369 -79927781 + L2 LINE L2 2842 3313 0 258 265 78 90 chr5 119702661 119702827 -79927323 - MER5A DNA MER1_type -25 164 1 314 326 70 8 chr5 119703877 119704006 -79926144 + MIR3 SINE MIR 31 167 -41 251 246 0 131 chr5 119704008 119704130 -79926020 - MIR SINE MIR -39 223 118 1531 294 35 42 chr5 119704131 119704817 -79925333 + L1ME LINE L1 6 686 -5384 275 385 43 0 chr5 119704819 119704936 -79925214 - MIR SINE MIR -121 141 20 257 204 19 19 chr5 119705195 119705277 -79924873 + MLT1J1 LTR MaLR 60 180 -327 256 296 62 28 chr5 119705392 119705571 -79924579 + MLT1L LTR MaLR 429 613 -2 274 136 51 34 chr5 119705794 119705853 -79924297 + L1MC/D LINE L1 5414 5473 -871 602 193 20 7 chr5 119705959 119706109 -79924041 + Charlie1 DNA MER1_type 2599 2750 -11 548 258 32 13 chr5 119706158 119706313 -79923837 - MER5B DNA MER1_type -19 159 2 3082 173 51 51 chr5 119706313 119707040 -79923110 + LTR8A LTR ERV1 1 727 0 15846 92 10 2 chr5 119707236 119710007 -79920143 - L1PA7 LINE L1 -313 5841 3043 199 188 21 21 chr5 119710434 119710482 -79919668 - MIR SINE MIR -75 133 86 1619 253 30 63 chr5 119711722 119712847 -79917303 - L1ME LINE L1 -391 5771 4685 1466 187 13 50 chr5 119713008 119713307 -79916843 - AluJb SINE Alu -22 290 3 332 279 65 62 chr5 119713318 119713594 -79916556 - L1ME LINE L1 -1498 4648 4372 2066 229 64 26 chr5 119713994 119714648 -79915502 - L1ME2 LINE L1 0 6164 5486 1642 251 75 18 chr5 119714675 119715117 -79915033 - MLT1E LTR MaLR -126 467 1 1267 214 71 29 chr5 119715493 119715843 -79914307 + MLT1A1 LTR MaLR 1 365 0 196 304 123 36 chr5 119716447 119716568 -79913582 - L2 LINE L2 -1 3312 3176 6968 63 6 0 chr5 119716568 119718096 -79912054 + L1PA6 LINE L1 4617 6147 -7 196 304 123 36 chr5 119718096 119718112 -79912038 - L2 LINE L2 -137 3176 3163 344 307 100 7 chr5 119718829 119718969 -79911181 - L3b LINE CR1 -225 1358 1206 1000 259 55 89 chr5 119719036 119719585 -79910565 - MER34 LTR ERV1 -2 540 11 6015 189 93 24 chr5 119719938 119720289 -79909861 + L1MC3 LINE L1 5585 5910 -1875 2297 104 0 10 chr5 119720289 119720596 -79909554 - AluSq SINE Alu -9 304 1 6015 189 93 24 chr5 119720596 119720915 -79909235 + L1MC3 LINE L1 5910 6205 -1580 288 0 0 0 chr5 119720915 119720947 -79909203 + (GA)n Simple_repeat Simple_repeat 2 33 0 6015 189 93 24 chr5 119720947 119722158 -79907992 + L1MC3 LINE L1 6205 7785 0 2074 126 14 0 chr5 119722541 119722835 -79907315 + AluSg SINE Alu 1 298 -12 22 56 0 0 chr5 119722839 119722875 -79907275 + AT_rich Low_complexity Low_complexity 1 36 0 222 242 30 15 chr5 119723315 119723381 -79906769 + (CA)n Simple_repeat Simple_repeat 1 67 0 487 283 49 27 chr5 119723859 119724043 -79906107 + MIR3 SINE MIR 18 205 -3 2402 77 0 6 chr5 119725158 119725469 -79904681 - AluY SINE Alu -2 309 1 450 203 51 34 chr5 119725666 119725784 -79904366 - MER97c DNA MER1_type? -967 123 4 401 315 84 14 chr5 119726208 119726421 -79903729 - MIR SINE MIR -2 260 33 354 250 156 56 chr5 119726473 119726653 -79903497 - MIR SINE MIR -1 261 64 430 305 152 15 chr5 119727759 119727956 -79902194 + MIR SINE MIR 39 262 0 188 305 76 19 chr5 119727963 119728068 -79902082 - L3b LINE CR1 -74 1509 1399 1962 109 27 31 chr5 119728600 119728894 -79901256 - THE1B LTR MaLR 0 364 72 1559 207 106 20 chr5 119729693 119730295 -79899855 - Charlie2 DNA MER1_type -9 2853 2201 560 273 121 18 chr5 119730284 119730566 -79899584 - Charlie2 DNA MER1_type -2551 311 1 * 284 275 13 51 chr5 119730581 119730693 -79899457 - MIR SINE MIR -58 150 40 387 293 78 56 chr5 119731220 119731452 -79898698 - L3 LINE CR1 -548 1029 793 448 194 0 121 chr5 119731945 119732069 -79898081 + Charlie1a DNA MER1_type 38 146 -1309 3860 211 43 12 chr5 119732100 119732235 -79897915 + Charlie1a DNA MER1_type 233 362 -2399 2032 114 67 22 chr5 119732235 119732594 -79897556 + THE1C LTR MaLR 1 375 0 3860 211 43 12 chr5 119732594 119733517 -79896633 + Charlie1a DNA MER1_type 362 1324 -131 487 327 101 10 chr5 119735383 119735591 -79894559 + MIR SINE MIR 22 248 -14 408 81 48 0 chr5 119735780 119735842 -79894308 - MLT1E2 LTR MaLR -5 621 557 30422 106 11 55 chr5 119736857 119743318 -79886832 + L1PA7 LINE L1 1 6170 0 426 253 58 0 chr5 119743393 119743572 -79886578 + L1ME LINE L1 4026 4215 -1931 1465 153 0 0 chr5 119744004 119744219 -79885931 + AluJb SINE Alu 93 307 -5 26 0 0 0 chr5 119744373 119744399 -79885751 + AT_rich Low_complexity Low_complexity 1 26 0 316 364 29 46 chr5 119744478 119744651 -79885499 - L1ME3A LINE L1 -38 6132 5963 334 301 82 58 chr5 119744791 119744894 -79885256 + L1MC4 LINE L1 7694 7793 -249 189 0 0 0 chr5 119744894 119744915 -79885235 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2072 128 0 7 chr5 119744917 119745207 -79884943 - AluSx SINE Alu -24 288 1 334 301 82 58 chr5 119745207 119745306 -79884844 + L1MC4 LINE L1 7793 7904 -138 3676 335 46 19 chr5 119745350 119746932 -79883218 + ERVL LTR ERVL 3281 4929 -835 1693 166 61 25 chr5 119746932 119747294 -79882856 - THE1C LTR MaLR 0 375 1 3676 335 46 19 chr5 119747294 119747719 -79882431 + ERVL LTR ERVL 4929 5341 -423 237 327 47 9 chr5 119747975 119748082 -79882068 + LTR33 LTR ERVL 7 117 -404 393 317 68 5 chr5 119748226 119748431 -79881719 + LTR33 LTR ERVL 304 521 0 791 292 45 13 chr5 119748431 119748743 -79881407 - L2 LINE L2 -1621 1693 1372 578 232 79 38 chr5 119748748 119748810 -79881340 + L1ME LINE L1 5106 5164 -1006 1115 197 68 84 chr5 119748810 119749180 -79880970 + MLT1A1 LTR MaLR 1 364 -1 578 232 79 38 chr5 119749180 119749520 -79880630 + L1ME LINE L1 5164 5514 -656 471 280 98 5 chr5 119749521 119749714 -79880436 - L2 LINE L2 -2186 1128 918 10513 196 25 33 chr5 119750459 119754383 -79875767 - L1PB4 LINE L1 0 6859 2979 947 235 45 40 chr5 119754364 119754717 -79875433 - L1PB4 LINE L1 -5159 1691 1337 * 6451 210 14 79 chr5 119754734 119756361 -79873789 - L1PB4 LINE L1 -5322 1527 6 3134 239 25 17 chr5 119756390 119757348 -79872802 + L1ME1 LINE L1 5197 6161 -5 3599 166 36 9 chr5 119757866 119758551 -79871599 + MER44D DNA MER2_type 1 704 -1 5871 106 14 14 chr5 119758749 119760002 -79870148 + L1PA12 LINE L1 4911 6167 -1 407 282 24 24 chr5 119760865 119760989 -79869161 - L2 LINE L2 -22 3291 3168 1072 199 44 8 chr5 119760998 119761249 -79868901 - L1MA8 LINE L1 -110 6181 5922 * 2224 223 26 23 chr5 119761243 119761852 -79868298 + L1ME2 LINE L1 5258 5868 -296 2365 80 0 45 chr5 119761858 119762172 -79867978 + AluSp SINE Alu 1 300 -13 297 109 0 0 chr5 119762172 119762218 -79867932 + (TA)n Simple_repeat Simple_repeat 1 46 0 313 241 96 0 chr5 119762218 119762301 -79867849 + L1MC4 LINE L1 6613 6703 -1339 306 291 47 0 chr5 119762323 119762409 -79867741 - L1MC4 LINE L1 -1339 6703 6614 * 330 271 47 0 chr5 119762336 119762421 -79867729 + L1MC4 LINE L1 6615 6703 -1339 240 279 47 0 chr5 119762435 119762521 -79867629 - L1MC4 LINE L1 -1339 6703 6614 233 260 0 0 chr5 119762521 119762571 -79867579 + (TA)n Simple_repeat Simple_repeat 2 51 0 801 226 77 90 chr5 119762582 119762839 -79867311 + L1ME2 LINE L1 5879 6138 -46 1576 167 35 57 chr5 119762839 119763156 -79866994 + AluJo SINE Alu 1 310 -2 2388 63 7 3 chr5 119763157 119763459 -79866691 + AluY SINE Alu 1 303 -8 801 226 77 90 chr5 119763459 119763509 -79866641 + L1ME2 LINE L1 6137 6184 0 259 293 78 17 chr5 119763952 119764068 -79866082 - MLT1I LTR MaLR -50 359 237 261 387 40 47 chr5 119764872 119765022 -79865128 - L2 LINE L2 -204 3068 2920 491 292 99 0 chr5 119765387 119765558 -79864592 + MIR SINE MIR 37 224 -38 430 316 0 36 chr5 119766069 119766208 -79863942 - L2 LINE L2 0 3313 3180 260 349 38 19 chr5 119766415 119766521 -79863629 - MIR3 SINE MIR -40 168 61 534 281 55 27 chr5 119766699 119766955 -79863195 - MLT1J LTR MaLR -25 486 224 1040 227 40 53 chr5 119767134 119767456 -79862694 + MLT2C1 LTR ERVL 6 323 -74 1779 120 7 4 chr5 119767503 119767778 -79862372 - MER2 DNA MER2_type -69 276 1 1324 264 42 33 chr5 119767859 119768283 -79861867 - MLT2F LTR ERVL -235 428 1 305 258 45 11 chr5 119768291 119768380 -79861770 - MLT1J LTR MaLR -298 213 122 183 163 70 0 chr5 119768475 119768518 -79861632 - L2 LINE L2 -92 3221 3176 382 293 17 0 chr5 119768954 119769070 -79861080 - MIR SINE MIR 0 262 145 338 216 165 0 chr5 119769615 119769712 -79860438 - MIR SINE MIR -103 159 47 960 264 25 0 chr5 119772725 119772960 -79857190 - MIR SINE MIR -2 260 20 539 303 139 16 chr5 119773002 119773246 -79856904 - L2 LINE L2 -35 3278 3005 806 288 23 28 chr5 119773249 119773638 -79856512 + L1ME LINE L1 5355 5741 -429 210 71 0 0 chr5 119773728 119773756 -79856394 + (TG)n Simple_repeat Simple_repeat 2 29 0 236 303 303 11 chr5 119774105 119774376 -79855774 - L2 LINE L2 -376 2938 2589 531 301 54 0 chr5 119774391 119774557 -79855593 + MER91A DNA MER1_type 19 193 -3 * 739 312 68 29 chr5 119774557 119774926 -79855224 - L2 LINE L2 -721 2593 2210 226 273 202 0 chr5 119774957 119775056 -79855094 + L2 LINE L2 3193 3311 -2 244 315 41 0 chr5 119775860 119775933 -79854217 + L2 LINE L2 3180 3255 -17 599 294 78 16 chr5 119776072 119776317 -79853833 + MIR SINE MIR 3 262 0 432 233 144 68 chr5 119776577 119776723 -79853427 - L2 LINE L2 0 3272 3116 250 256 58 12 chr5 119776866 119776952 -79853198 - MIR SINE MIR -56 206 117 23 0 0 0 chr5 119777587 119777610 -79852540 + AT_rich Low_complexity Low_complexity 1 23 0 626 205 20 46 chr5 119778919 119779070 -79851080 - MER5A DNA MER1_type -42 147 1 560 214 18 0 chr5 119779179 119779291 -79850859 - MER81 DNA DNA 0 114 1 666 231 41 12 chr5 119779495 119779664 -79850486 - MER5B DNA MER1_type 0 178 5 600 314 108 19 chr5 119779729 119780089 -79850061 + MLT1H1 LTR MaLR 38 429 -126 234 0 0 0 chr5 119781516 119781542 -79848608 + (T)n Simple_repeat Simple_repeat 1 26 0 235 320 0 72 chr5 119781882 119782007 -79848143 - MLT1K LTR MaLR -158 430 315 2400 74 0 22 chr5 119782226 119782538 -79847612 - AluSc SINE Alu -4 305 1 443 265 96 0 chr5 119782930 119783066 -79847084 + MER5A DNA MER1_type 7 155 -34 24 32 0 0 chr5 119783161 119783192 -79846958 + AT_rich Low_complexity Low_complexity 1 31 0 2080 129 6 3 chr5 119784420 119784774 -79845376 - AluSx SINE Alu 0 355 1 188 291 34 86 chr5 119785779 119785896 -79844254 + L2 LINE L2 2547 2657 -657 252 322 26 0 chr5 119786440 119786555 -79843595 + MIR SINE MIR 73 190 -72 349 252 35 26 chr5 119786757 119786872 -79843278 - LTR67 LTR ERVL -17 540 425 236 394 0 0 chr5 119787057 119787128 -79843022 - LTR67 LTR ERVL -363 194 124 1361 196 32 46 chr5 119787478 119787671 -79842479 + MSTD LTR MaLR 1 190 -206 2231 105 3 0 chr5 119787671 119787966 -79842184 + AluSp SINE Alu 1 296 -17 1361 196 32 46 chr5 119787966 119788057 -79842093 + MSTD LTR MaLR 190 281 -115 823 100 0 0 chr5 119788203 119788313 -79841837 + MSTD LTR MaLR 287 396 0 767 266 35 10 chr5 119788329 119788532 -79841618 + MIR SINE MIR 9 216 -46 331 228 51 25 chr5 119789373 119789452 -79840698 + L2 LINE L2 3233 3313 0 360 43 0 0 chr5 119789947 119789993 -79840157 + (TG)n Simple_repeat Simple_repeat 1 46 0 694 249 217 59 chr5 119791251 119791708 -79838442 + MLT1H LTR MaLR 13 541 -8 364 285 86 7 chr5 119792112 119792263 -79837887 - MIR3 SINE MIR -23 185 23 2282 102 0 3 chr5 119792346 119792659 -79837491 - AluSx SINE Alu 0 312 1 361 319 75 38 chr5 119795092 119795305 -79834845 + MIR SINE MIR 2 222 -40 242 143 0 0 chr5 119795345 119795380 -79834770 + L2 LINE L2 3223 3257 -15 234 0 0 0 chr5 119795488 119795514 -79834636 + (TG)n Simple_repeat Simple_repeat 1 26 0 267 54 0 0 chr5 119795514 119795551 -79834599 + (GA)n Simple_repeat Simple_repeat 2 38 0 258 382 0 0 chr5 119795860 119795936 -79834214 - MIR SINE MIR -69 139 64 852 275 66 0 chr5 119795952 119796254 -79833896 - L1MEc LINE L1 -2475 3740 3419 * 5311 212 62 11 chr5 119796252 119797694 -79832456 + L1M4 LINE L1 3890 5401 -769 335 82 0 0 chr5 119797698 119797747 -79832403 + L1MB3 LINE L1 5350 5398 -782 1425 175 101 4 chr5 119797756 119798013 -79832137 + AluJo SINE Alu 22 303 -9 3593 186 67 4 chr5 119798013 119798756 -79831394 + L1MB3 LINE L1 5390 6179 -4 760 212 134 32 chr5 119798822 119799195 -79830955 - L1MEc LINE L1 -2873 3342 2932 * 5020 204 44 17 chr5 119799188 119800706 -79829444 - L1MC2 LINE L1 0 6344 4755 192 97 0 0 chr5 119800706 119800737 -79829413 + (TA)n Simple_repeat Simple_repeat 2 32 0 5020 204 44 17 chr5 119800737 119801228 -79828922 - L1MC2 LINE L1 -1589 4755 4279 1361 229 47 117 chr5 119801240 119801948 -79828202 - L1MEc LINE L1 -3323 2892 2297 5554 126 22 7 chr5 119801948 119803256 -79826894 - L1PA16 LINE L1 -7 6159 4842 1361 229 47 117 chr5 119803256 119803653 -79826497 - L1MEc LINE L1 -3918 2297 1874 626 273 47 42 chr5 119803666 119804047 -79826103 - L1MEc LINE L1 -4641 1755 1373 763 307 117 57 chr5 119804065 119804268 -79825882 - L1MEc LINE L1 -5108 1288 1099 1942 148 0 3 chr5 119804268 119804588 -79825562 - AluSx SINE Alu 0 319 1 763 307 117 57 chr5 119804588 119805403 -79824747 - L1MEc LINE L1 -5297 1099 208 318 132 0 0 chr5 119806179 119806232 -79823918 + (TC)n Simple_repeat Simple_repeat 2 54 0 258 177 48 0 chr5 119806234 119806296 -79823854 - L1MC4 LINE L1 -1339 6703 6639 1364 176 105 15 chr5 119806521 119806668 -79823482 - AluJb SINE Alu -21 291 159 180 0 0 0 chr5 119806668 119806688 -79823462 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1364 176 105 15 chr5 119806688 119806807 -79823343 - AluJb SINE Alu -153 159 1 275 224 30 0 chr5 119807178 119807245 -79822905 + MLT1K LTR MaLR 499 567 -21 1609 158 64 62 chr5 119807245 119807619 -79822531 - THE1C LTR MaLR 0 375 1 9249 127 40 26 chr5 119807619 119809177 -79820973 - THE1C-int LTR MaLR 0 1580 1 1909 173 16 27 chr5 119809177 119809553 -79820597 - THE1C LTR MaLR 0 375 4 203 333 108 0 chr5 119809592 119809685 -79820465 - MIR SINE MIR -62 146 44 202 258 180 11 chr5 119810934 119811023 -79819127 - MIR SINE MIR 0 262 159 307 221 15 0 chr5 119811023 119811091 -79819059 - MIR SINE MIR -31 231 163 244 295 128 0 chr5 119811221 119811299 -79818851 - MIR SINE MIR -164 98 11 555 287 27 6 chr5 119812559 119812719 -79817431 - MIR SINE MIR -59 149 37 2150 164 122 9 chr5 119813550 119814002 -79816148 - MLT1D LTR MaLR -2 503 1 2040 129 26 60 chr5 119814002 119814349 -79815801 + MER1B DNA MER1_type 1 337 0 275 188 12 25 chr5 119814467 119814547 -79815603 - L1PB4 LINE L1 -3 6153 6075 24 0 0 0 chr5 119814671 119814695 -79815455 + AT_rich Low_complexity Low_complexity 1 24 0 987 206 0 0 chr5 119815132 119815307 -79814843 - FAM SINE Alu 0 175 1 36 40 0 0 chr5 119815529 119815579 -79814571 + AT_rich Low_complexity Low_complexity 1 50 0 908 287 117 53 chr5 119815782 119816486 -79813664 + L1MC4a LINE L1 6101 6849 -959 25 0 0 0 chr5 119816587 119816612 -79813538 + AT_rich Low_complexity Low_complexity 1 25 0 200 349 0 45 chr5 119816877 119816943 -79813207 - L3 LINE CR1 -5 1572 1510 217 267 67 0 chr5 119817003 119817078 -79813072 - MER91C DNA MER1_type -20 120 41 183 80 0 0 chr5 119817078 119817103 -79813047 + (T)n Simple_repeat Simple_repeat 1 25 0 509 270 41 56 chr5 119917148 119917344 -79712806 + MIR SINE MIR 44 236 -26 223 253 11 11 chr5 119917559 119917650 -79712500 + (CATATA)n Simple_repeat Simple_repeat 5 95 0 * 611 219 0 22 chr5 119917640 119917823 -79712327 + (TA)n Simple_repeat Simple_repeat 1 179 0 313 297 82 26 chr5 119918013 119918208 -79711942 - L1M4 LINE L1 -1784 4362 4157 6114 85 32 11 chr5 119918209 119919119 -79711031 - L1PA7 LINE L1 -2 6152 5214 30793 114 11 26 chr5 119919412 119924465 -79705685 - L1PA7 LINE L1 -1161 4985 11 35 24 0 0 chr5 119924531 119924573 -79705577 + AT_rich Low_complexity Low_complexity 1 42 0 1088 309 97 45 chr5 119924584 119924764 -79705386 + L2 LINE L2 2411 2580 -733 7076 60 0 0 chr5 119924764 119926115 -79704035 - L1PA5 LINE L1 0 6154 4802 1088 309 97 45 chr5 119926115 119926794 -79703356 + L2 LINE L2 2580 3313 0 183 42 0 0 chr5 119927048 119927072 -79703078 + (TC)n Simple_repeat Simple_repeat 1 24 0 216 67 0 0 chr5 119927088 119927118 -79703032 + (TG)n Simple_repeat Simple_repeat 1 30 0 22 35 0 0 chr5 119927216 119927245 -79702905 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr5 119927959 119927996 -79702154 + AT_rich Low_complexity Low_complexity 1 37 0 274 283 46 75 chr5 119928055 119928295 -79701855 - L1M4 LINE L1 -2417 3729 3497 275 300 95 22 chr5 119928363 119928862 -79701288 - L1MDb LINE L1 -4851 1736 1155 2083 123 0 10 chr5 119929978 119930280 -79699870 - AluSc SINE Alu -10 299 1 556 179 2 27 chr5 119930365 119930483 -79699667 + MLT1A2 LTR MaLR 279 371 -3 2394 69 7 10 chr5 119930489 119930795 -79699355 + AluY SINE Alu 1 305 -6 22 35 0 0 chr5 119931092 119931121 -79699029 + AT_rich Low_complexity Low_complexity 1 29 0 242 357 12 0 chr5 119931165 119931249 -79698901 - L2 LINE L2 -670 2644 2560 1469 105 5 0 chr5 119931406 119931606 -79698544 - AluSp SINE Alu -13 300 100 244 397 31 31 chr5 119931741 119932031 -79698119 - L2 LINE L2 -921 2393 2104 199 291 197 8 chr5 119932275 119932402 -79697748 - L2 LINE L2 -882 2432 2282 4709 65 11 0 chr5 119932646 119933260 -79696890 + L1PA8 LINE L1 5552 6172 0 3407 217 56 22 chr5 119933489 119933983 -79696167 - L1MB5 LINE L1 -158 6016 5540 402 21 0 0 chr5 119933983 119934030 -79696120 + (CA)n Simple_repeat Simple_repeat 2 48 0 3407 217 56 22 chr5 119934030 119934863 -79695287 - L1MB5 LINE L1 -634 5540 4622 2011 134 0 23 chr5 119934863 119935170 -79694980 - AluSx SINE Alu -12 300 1 3407 217 56 22 chr5 119935170 119935540 -79694610 - L1MB5 LINE L1 -1552 4622 4266 2559 241 58 18 chr5 119935536 119936543 -79693607 - L1MB5 LINE L1 -2427 3719 2673 * 25259 31 7 0 chr5 119936692 119940557 -79689593 - L1PA4 LINE L1 -1 6154 2281 6030 77 0 0 chr5 119940560 119941363 -79688787 - L1PA4 LINE L1 -5340 806 4 539 213 28 14 chr5 119941394 119941535 -79688615 - Charlie4 DNA MER1_type -1686 275 133 21 57 0 0 chr5 119942057 119942092 -79688058 + AT_rich Low_complexity Low_complexity 1 35 0 820 201 32 0 chr5 119942691 119942845 -79687305 + FRAM SINE Alu 1 159 -17 34 0 0 0 chr5 119942850 119942884 -79687266 + AT_rich Low_complexity Low_complexity 1 34 0 467 308 35 14 chr5 119942992 119943285 -79686865 + L1ME4a LINE L1 5512 5775 -346 311 222 83 0 chr5 119943389 119943461 -79686689 + MIR SINE MIR 74 151 -111 21 0 0 0 chr5 119943484 119943505 -79686645 + AT_rich Low_complexity Low_complexity 1 21 0 330 309 109 0 chr5 119943517 119943627 -79686523 + MIR SINE MIR 133 254 -8 341 302 47 7 chr5 119944143 119944292 -79685858 + L1ME4a LINE L1 5962 6116 -5 234 128 0 0 chr5 119944618 119944657 -79685493 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 261 381 0 0 chr5 119944788 119944885 -79685265 - MLT1K LTR MaLR -353 235 139 29 0 0 0 chr5 119946646 119946675 -79683475 + AT_rich Low_complexity Low_complexity 1 29 0 375 284 78 14 chr5 119946780 119946921 -79683229 + MIR SINE MIR 42 191 -71 262 293 45 60 chr5 119947934 119948067 -79682083 - L2 LINE L2 0 3313 3183 426 277 61 38 chr5 119948787 119949023 -79681127 - MIR SINE MIR -7 255 16 303 307 78 63 chr5 119949434 119949704 -79680446 - L2 LINE L2 -911 2403 2130 1337 341 40 16 chr5 119949704 119950567 -79679583 - ERVL LTR ERVL -1723 3802 2865 429 223 67 74 chr5 119950608 119950877 -79679273 - LTR41 LTR ERVL -1 772 506 555 232 29 0 chr5 119951336 119951474 -79678676 - LTR41 LTR ERVL -581 192 51 1700 330 73 37 chr5 119951534 119952297 -79677853 - ERVL LTR ERVL -2909 2855 2042 2226 115 0 10 chr5 119952297 119952601 -79677549 - AluSx SINE Alu 0 312 12 1700 330 73 37 chr5 119952601 119952890 -79677260 - ERVL LTR ERVL -3722 2042 1765 301 363 38 52 chr5 119953014 119953441 -79676709 - ERVL LTR ERVL -4159 1605 1185 220 225 0 0 chr5 119953599 119953639 -79676511 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 286 314 57 34 chr5 119953909 119954084 -79676066 - LTR16C LTR ERVL -9 482 304 208 293 67 13 chr5 119955546 119955621 -79674529 + L2 LINE L2 2991 3069 -203 210 178 22 0 chr5 119955823 119955868 -79674282 + GA-rich Low_complexity Low_complexity 2 47 0 22 0 0 0 chr5 119956758 119956780 -79673370 + AT_rich Low_complexity Low_complexity 1 22 0 330 248 71 71 chr5 119957384 119957582 -79672568 + MIR SINE MIR 49 246 -16 459 0 0 0 chr5 119957994 119958045 -79672105 + (CA)n Simple_repeat Simple_repeat 2 52 0 342 0 0 0 chr5 119958044 119958082 -79672068 + (TA)n Simple_repeat Simple_repeat 2 39 0 * 1796 173 51 13 chr5 119959776 119960170 -79669980 - L1MC2 LINE L1 0 6344 5936 405 0 0 0 chr5 119961048 119961093 -79669057 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 35 0 0 chr5 119961856 119961885 -79668265 + AT_rich Low_complexity Low_complexity 1 29 0 209 365 10 10 chr5 119962050 119962146 -79668004 - MIR3 SINE MIR -50 158 63 300 258 26 13 chr5 119964133 119964284 -79665866 + (TTATA)n Simple_repeat Simple_repeat 2 154 0 2429 67 0 3 chr5 119965958 119966256 -79663894 + AluY SINE Alu 1 297 -14 1969 111 67 17 chr5 119967280 119967577 -79662573 - AluSx SINE Alu 0 312 1 271 290 0 0 chr5 119967836 119967905 -79662245 - MIR3 SINE MIR -1 207 139 309 51 0 0 chr5 119968201 119968240 -79661910 + (CA)n Simple_repeat Simple_repeat 1 39 0 1968 107 10 3 chr5 119968432 119968731 -79661419 - L1PA14 LINE L1 0 6161 5861 583 298 6 12 chr5 119968849 119969010 -79661140 + MIR SINE MIR 8 167 -95 1848 126 67 0 chr5 119969277 119969562 -79660588 - AluSc SINE Alu -5 304 1 21 57 0 0 chr5 119969624 119969659 -79660491 + AT_rich Low_complexity Low_complexity 1 35 0 1901 193 63 27 chr5 119969840 119970316 -79659834 + MLT1D LTR MaLR 1 493 -12 2142 221 70 2 chr5 119970327 119970871 -79659279 + MLT1D-int LTR MaLR 1 581 -790 745 172 51 112 chr5 119970871 119971086 -79659064 + MLT1-int LTR MaLR 460 661 -710 484 253 0 0 chr5 119971214 119971313 -79658837 + MLT1-int LTR MaLR 692 790 -581 396 269 103 36 chr5 119971530 119971753 -79658397 - MER46C DNA MER2_type -83 255 18 191 333 47 21 chr5 119971853 119972045 -79658105 - L2 LINE L2 -240 3032 2836 2111 153 33 29 chr5 119974848 119975396 -79654754 + MLT2A2 LTR ERVL 2 554 0 334 343 132 55 chr5 119976162 119976564 -79653586 + L2 LINE L2 2837 3269 -3 28 29 0 0 chr5 119979320 119979355 -79650795 + AT_rich Low_complexity Low_complexity 1 35 0 441 0 0 0 chr5 119979886 119979935 -79650215 + (TG)n Simple_repeat Simple_repeat 2 50 0 428 241 0 0 chr5 119979939 119980026 -79650124 + MIR SINE MIR 63 149 -113 252 226 0 0 chr5 119980087 119980149 -79650001 + (TA)n Simple_repeat Simple_repeat 1 62 0 23 33 0 0 chr5 119980307 119980337 -79649813 + AT_rich Low_complexity Low_complexity 1 30 0 2236 56 0 0 chr5 119980558 119980828 -79649322 - AluY SINE Alu -21 290 21 180 384 69 13 chr5 119981309 119981541 -79648609 - L2 LINE L2 -1138 2176 1932 1004 334 141 31 chr5 119982094 119983003 -79647147 - L2 LINE L2 0 3313 2299 420 226 11 0 chr5 119984499 119984592 -79645558 + HAL1 LINE L1 1675 1768 -739 238 260 0 124 chr5 119985072 119985146 -79645004 + Charlie8 DNA MER1_type 99 181 -160 1812 179 0 0 chr5 119985146 119985426 -79644724 + AluJb SINE Alu 1 280 -32 360 64 0 0 chr5 119985428 119985475 -79644675 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 238 260 0 124 chr5 119985475 119985566 -79644584 + Charlie8 DNA MER1_type 182 246 -95 196 346 85 39 chr5 119985603 119985733 -79644417 - MIR SINE MIR -126 136 1 213 246 16 16 chr5 119986022 119986083 -79644067 + (CATATA)n Simple_repeat Simple_repeat 3 63 0 2853 139 43 18 chr5 119986163 119986279 -79643871 - L1MA9 LINE L1 -30 6282 6170 309 51 0 0 chr5 119986279 119986318 -79643832 + (TG)n Simple_repeat Simple_repeat 1 39 0 2853 139 43 18 chr5 119986318 119986763 -79643387 - L1MA9 LINE L1 -142 6170 5707 2536 57 0 0 chr5 119987530 119987826 -79642324 - AluY SINE Alu -15 296 1 23 0 0 0 chr5 119987827 119987850 -79642300 + AT_rich Low_complexity Low_complexity 1 23 0 1008 92 0 0 chr5 119988486 119988627 -79641523 - L1PA11 LINE L1 -21 6153 6013 1133 229 149 58 chr5 119989794 119990396 -79639754 - MER77 LTR ERV1 -7 598 57 4912 223 53 56 chr5 119990555 119991258 -79638892 + L1MC4a LINE L1 5597 6301 -1507 1799 168 79 50 chr5 119991258 119991405 -79638745 - MSTA LTR MaLR 0 428 287 1978 145 3 10 chr5 119991405 119991709 -79638441 - AluSx SINE Alu -10 302 1 1799 168 79 50 chr5 119991709 119991977 -79638173 - MSTA LTR MaLR -141 287 1 4912 223 53 56 chr5 119991977 119992998 -79637152 + L1MC4a LINE L1 6301 7316 -492 21 36 0 0 chr5 119993314 119993342 -79636808 + AT_rich Low_complexity Low_complexity 1 28 0 1295 33 0 0 chr5 119993906 119994058 -79636092 + L1PA3 LINE L1 5999 6150 -5 7899 223 46 30 chr5 119994511 119994904 -79635246 - L1MB8 LINE L1 -1 6177 5792 1976 120 51 20 chr5 119994904 119995254 -79634896 + MER46B DNA MER2_type 1 236 0 7899 223 46 30 chr5 119995254 119995747 -79634403 - L1MB8 LINE L1 -386 5792 5308 1015 141 20 15 chr5 119995747 119995945 -79634205 - L1MA6 LINE L1 0 6300 6102 7899 223 46 30 chr5 119995945 119998866 -79631284 - L1MB8 LINE L1 -870 5308 2294 283 241 0 0 chr5 119998897 119998976 -79631174 - L1MEc LINE L1 -4580 1816 1738 1469 257 72 30 chr5 119999009 119999967 -79630183 - L1M4c LINE L1 -4451 2578 1427 319 252 63 118 chr5 120001729 120001943 -79628207 + MIR SINE MIR 1 205 -26 6659 17 1 0 chr5 120002927 120003730 -79626420 - L1PA2 LINE L1 0 6155 5352 1450 21 0 0 chr5 120003750 120003936 -79626214 + L1P LINE L1 5154 5339 -807 23 0 0 0 chr5 120005301 120005324 -79624826 + AT_rich Low_complexity Low_complexity 1 23 0 310 290 119 72 chr5 120007134 120007427 -79622723 - L1M4c LINE L1 -5880 969 663 494 288 112 101 chr5 120007444 120008099 -79622051 + L1M2 LINE L1 387 927 -5922 180 0 0 0 chr5 120008099 120008119 -79622031 + (CTG)n Simple_repeat Simple_repeat 2 21 0 494 288 112 101 chr5 120008119 120008576 -79621574 + L1M2 LINE L1 927 1377 -5472 288 254 0 0 chr5 120008654 120008721 -79621429 + (CGG)n Simple_repeat Simple_repeat 1 67 0 32 26 0 0 chr5 120010663 120010702 -79619448 + AT_rich Low_complexity Low_complexity 1 39 0 393 287 84 18 chr5 120011095 120011262 -79618888 - MIR3 SINE MIR -14 194 17 27 0 0 0 chr5 120012123 120012150 -79618000 + AT_rich Low_complexity Low_complexity 1 27 0 793 216 30 125 chr5 120013626 120013890 -79616260 - MER8 DNA MER2_type 0 239 1 577 311 32 35 chr5 120014453 120014765 -79615385 - L1MC4a LINE L1 -1942 5866 5556 358 323 73 36 chr5 120015755 120015947 -79614203 - L3 LINE CR1 -26 1551 1353 1243 303 154 47 chr5 120015991 120017271 -79612879 - L2 LINE L2 -61 3252 1822 347 307 307 16 chr5 120017263 120017696 -79612454 - L3 LINE CR1 -278 1299 741 * 376 329 40 20 chr5 120017998 120018150 -79612000 - L3 LINE CR1 -1066 511 357 266 241 51 29 chr5 120018212 120018349 -79611801 - L1ME4a LINE L1 0 6121 5982 311 289 56 14 chr5 120018567 120018709 -79611441 - L1ME4a LINE L1 -422 5699 5552 907 218 5 38 chr5 120019142 120019353 -79610797 + MIR SINE MIR 59 262 0 240 35 0 0 chr5 120021581 120021610 -79608540 + (TA)n Simple_repeat Simple_repeat 2 30 0 1423 196 47 36 chr5 120022429 120022730 -79607420 + AluJo SINE Alu 1 304 -8 670 309 51 8 chr5 120023293 120023529 -79606621 + MIR SINE MIR 17 262 0 1163 174 0 70 chr5 120023733 120023974 -79606176 + MER58A DNA MER1_type 1 224 0 220 79 132 0 chr5 120025067 120025219 -79604931 + (TA)n Simple_repeat Simple_repeat 1 172 0 224 167 14 42 chr5 120025221 120025293 -79604857 + (TTATA)n Simple_repeat Simple_repeat 4 73 0 256 103 109 0 chr5 120025300 120025456 -79604694 + (TA)n Simple_repeat Simple_repeat 1 173 0 27 73 0 0 chr5 120025457 120025512 -79604638 + AT_rich Low_complexity Low_complexity 1 55 0 29 28 0 0 chr5 120025626 120025662 -79604488 + AT_rich Low_complexity Low_complexity 1 36 0 330 306 147 6 chr5 120026093 120026263 -79603887 + MIR SINE MIR 51 244 -18 2250 112 10 0 chr5 120029095 120029398 -79600752 - AluSx SINE Alu -6 306 1 207 374 12 0 chr5 120029550 120029633 -79600517 - MIR SINE MIR -1 261 178 296 278 37 47 chr5 120030315 120030506 -79599644 + MER117 DNA MER1_type 8 196 -1 205 263 11 11 chr5 120030808 120030903 -79599247 + CT-rich Low_complexity Low_complexity 3 97 0 193 310 42 28 chr5 120031050 120031121 -79599029 + L2 LINE L2 2771 2842 -472 381 93 0 0 chr5 120031134 120031188 -79598962 + (CA)n Simple_repeat Simple_repeat 1 54 0 202 355 58 22 chr5 120031233 120031371 -79598779 + L2 LINE L2 2942 3084 -188 2302 88 0 16 chr5 120031527 120031833 -79598317 + AluY SINE Alu 1 301 -10 254 317 0 0 chr5 120031834 120031894 -79598256 - MIR SINE MIR -140 122 63 181 373 144 0 chr5 120031926 120032044 -79598106 + L2 LINE L2 3133 3267 -5 305 286 41 0 chr5 120034319 120034417 -79595733 - HAL1 LINE L1 -857 1650 1549 246 105 0 0 chr5 120034717 120034755 -79595395 + (TG)n Simple_repeat Simple_repeat 2 39 0 760 272 63 0 chr5 120034990 120035196 -79594954 + MIR SINE MIR 8 226 -36 245 383 0 0 chr5 120035573 120035654 -79594496 + MIR SINE MIR 43 123 -85 288 310 14 62 chr5 120036208 120036353 -79593797 - MIR SINE MIR -68 140 2 518 328 7 17 chr5 120036980 120037167 -79592983 - MIR SINE MIR -67 141 1 287 239 30 15 chr5 120037667 120037734 -79592416 - MLT1J1 LTR MaLR -308 138 71 331 276 34 34 chr5 120037830 120037982 -79592168 - MIR SINE MIR -67 141 42 22 0 0 0 chr5 120039223 120039245 -79590905 + AT_rich Low_complexity Low_complexity 1 22 0 882 277 104 62 chr5 120039247 120040581 -79589569 - L1MC4a LINE L1 -743 5403 4672 384 296 191 46 chr5 120041392 120041831 -79588319 + L2 LINE L2 2013 2515 -799 6811 190 15 20 chr5 120042053 120042181 -79587969 - L1PA15 LINE L1 -7 6158 6031 2264 96 7 0 chr5 120042181 120042474 -79587676 - AluSg SINE Alu -15 295 1 6811 190 15 20 chr5 120042474 120043019 -79587131 - L1PA15 LINE L1 -134 6031 5485 2232 111 0 3 chr5 120043019 120043317 -79586833 - AluSq SINE Alu -16 297 1 6811 190 15 20 chr5 120043317 120044923 -79585227 - L1PA15 LINE L1 -680 5485 3902 229 167 0 0 chr5 120044925 120044961 -79585189 - 5S rRNA rRNA -85 36 1 4070 211 10 27 chr5 120044961 120045952 -79584198 - L1PA15 LINE L1 -2228 3918 2945 859 307 29 70 chr5 120046026 120046750 -79583400 + L2 LINE L2 2616 3313 0 289 320 191 4 chr5 120047298 120047594 -79582556 - L2 LINE L2 -233 3039 2690 207 330 108 58 chr5 120047635 120048014 -79582136 - L2 LINE L2 -1121 2193 1796 646 281 33 25 chr5 120048767 120049041 -79581109 - MARNA DNA Mariner -143 443 168 391 246 59 8 chr5 120049102 120049220 -79580930 - MER20B DNA MER1_type -624 159 36 2381 67 0 0 chr5 120051321 120051638 -79578512 - AluY SINE Alu 0 317 1 2025 285 76 49 chr5 120051875 120053899 -79576251 - HAL1 LINE L1 -170 2337 92 341 353 86 27 chr5 120054640 120054827 -79575323 + MIR3 SINE MIR 2 199 -9 189 0 0 0 chr5 120055496 120055517 -79574633 + (TC)n Simple_repeat Simple_repeat 2 22 0 342 206 10 69 chr5 120056009 120056111 -79574039 + MER103 DNA DNA 29 124 -42 2749 152 17 97 chr5 120056951 120057531 -79572619 - MLT2B3 LTR ERVL -20 534 1 2117 108 3 11 chr5 120058898 120059222 -79570928 - AluSq SINE Alu 0 322 1 21 57 0 0 chr5 120059746 120059781 -79570369 + AT_rich Low_complexity Low_complexity 1 35 0 1818 236 47 24 chr5 120060441 120060528 -79569622 - L1MB8 LINE L1 0 6178 6092 1152 274 53 91 chr5 120060528 120061503 -79568647 - L1MD2 LINE L1 -261 6098 5161 901 219 92 0 chr5 120064816 120065012 -79565138 + MER58C DNA MER1_type 1 214 -1 1678 161 3 28 chr5 120065350 120065641 -79564509 + AluJo SINE Alu 7 290 -22 198 0 0 0 chr5 120066903 120066925 -79563225 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1861 97 0 0 chr5 120066939 120067177 -79562973 - AluSx SINE Alu -25 287 50 417 143 0 0 chr5 120067177 120067240 -79562910 - L1P4 LINE L1 -610 5555 5493 2232 103 0 22 chr5 120067240 120067552 -79562598 - AluSq SINE Alu -8 305 1 2140 154 11 8 chr5 120067833 120068197 -79561953 + MLT1A1 LTR MaLR 1 365 0 215 254 0 17 chr5 120068631 120068690 -79561460 + L2 LINE L2 3202 3259 -13 301 321 47 0 chr5 120068771 120068877 -79561273 + L2 LINE L2 3162 3272 0 329 382 36 32 chr5 120069280 120069589 -79560561 - L2 LINE L2 -76 3196 2887 479 277 114 26 chr5 120069793 120070100 -79560050 + MER113 DNA MER1_type? 155 488 -33 315 329 26 26 chr5 120070171 120070326 -79559824 - L2 LINE L2 -567 2747 2593 730 221 46 57 chr5 120071080 120071360 -79558790 + L2 LINE L2 1009 1285 -2029 356 224 26 167 chr5 120071360 120071535 -79558615 + L2 LINE L2 2562 2699 -615 1605 161 77 7 chr5 120071535 120071808 -79558342 + AluJb SINE Alu 1 292 -20 356 224 26 167 chr5 120071808 120071860 -79558290 + L2 LINE L2 2699 2757 -557 997 218 169 23 chr5 120071883 120072231 -79557919 - L1M4 LINE L1 -2205 3941 3543 10059 211 42 43 chr5 120074299 120078141 -79552009 - L1MC3 LINE L1 -743 5683 2496 4353 116 113 128 chr5 120078141 120079566 -79550584 + pTR5 LTR ERV1 745 2438 0 959 190 24 19 chr5 120079568 120079829 -79550321 - L1MC3 LINE L1 -3926 2500 2238 * 2674 172 27 69 chr5 120079817 120080451 -79549699 - L1MC3 LINE L1 -5247 1179 573 1051 226 41 22 chr5 120080467 120080737 -79549413 - L1MC3 LINE L1 -5802 624 350 804 251 58 43 chr5 120080782 120081109 -79549041 - L1MC3 LINE L1 -6074 352 21 923 210 45 0 chr5 120082427 120082627 -79547523 + MER3 DNA MER1_type 1 209 0 297 169 0 0 chr5 120082670 120082729 -79547421 + (TG)n Simple_repeat Simple_repeat 2 60 0 210 281 0 18 chr5 120082938 120082995 -79547155 + GA-rich Low_complexity Low_complexity 2 57 0 222 37 0 0 chr5 120084229 120084256 -79545894 + (CAA)n Simple_repeat Simple_repeat 1 27 0 254 193 110 83 chr5 120085085 120085127 -79545023 + MER112 DNA MER1_type 148 187 -73 733 159 115 13 chr5 120085127 120085284 -79544866 - MER5B DNA MER1_type -2 176 4 254 193 110 83 chr5 120085284 120085350 -79544800 + MER112 DNA MER1_type 187 259 -1 280 277 69 20 chr5 120085556 120085657 -79544493 + L1MEd LINE L1 954 1059 -5471 355 309 42 8 chr5 120085913 120086166 -79543984 + L1MEd LINE L1 1846 2100 -4440 706 292 57 29 chr5 120086564 120087156 -79542994 + L1MEd LINE L1 2608 3216 -3324 199 120 20 20 chr5 120087877 120087927 -79542223 + (TA)n Simple_repeat Simple_repeat 1 50 0 265 179 54 0 chr5 120088106 120088162 -79541988 + MIR SINE MIR 86 144 -64 2263 101 7 0 chr5 120088651 120088959 -79541191 + AluSg SINE Alu 1 310 0 193 286 36 18 chr5 120089457 120089513 -79540637 + MIR SINE MIR 34 90 -118 236 250 43 76 chr5 120089780 120089872 -79540278 - L2 LINE L2 0 3313 3225 22 0 0 30 chr5 120092092 120092105 -79538045 + AT_rich Low_complexity Low_complexity 1 13 -19 2014 138 0 10 chr5 120092105 120092401 -79537749 - AluSx SINE Alu -19 293 1 22 0 0 30 chr5 120092401 120092420 -79537730 + AT_rich Low_complexity Low_complexity 13 32 0 808 146 41 0 chr5 120092420 120092543 -79537607 + AluSg/x SINE Alu 154 281 -29 756 184 6 24 chr5 120092559 120092727 -79537423 - MER3 DNA MER1_type -44 165 1 285 29 0 0 chr5 120095516 120095550 -79534600 + (CA)n Simple_repeat Simple_repeat 2 35 0 513 241 78 35 chr5 120096338 120096649 -79533501 + MER20B DNA MER1_type 1 354 -429 22 0 0 0 chr5 120097230 120097252 -79532898 + AT_rich Low_complexity Low_complexity 1 22 0 2344 90 0 3 chr5 120097255 120097556 -79532594 + AluY SINE Alu 1 300 -11 585 273 12 24 chr5 120098223 120098388 -79531762 - MER5B DNA MER1_type -3 175 13 552 299 109 50 chr5 120099039 120099377 -79530773 - HAL1 LINE L1 -1039 1468 1111 2601 85 14 3 chr5 120099453 120099818 -79530332 - L1PA8 LINE L1 -4 6168 5800 217 154 0 26 chr5 120099908 120099947 -79530203 + CT-rich Low_complexity Low_complexity 3 40 0 233 348 48 19 chr5 120099973 120100180 -79529970 - HAL1 LINE L1 -1644 863 651 557 249 77 4 chr5 120100517 120100750 -79529400 - L1MEc LINE L1 -4094 2302 2053 14044 137 25 13 chr5 120100757 120103146 -79527004 + Tigger1 DNA MER2_type 1 2418 0 1080 259 50 13 chr5 120103260 120103642 -79526508 - L1MEc LINE L1 -5961 435 40 358 226 21 0 chr5 120103683 120103776 -79526374 - HAL1 LINE L1 -2366 141 47 1829 161 0 14 chr5 120105866 120106184 -79523966 - AluSx SINE Alu 0 314 1 24 0 0 0 chr5 120109223 120109247 -79520903 + AT_rich Low_complexity Low_complexity 1 24 0 452 317 128 62 chr5 120109247 120109686 -79520464 - L2 LINE L2 -1 3271 2804 2234 97 3 10 chr5 120110971 120111269 -79518881 + AluSp SINE Alu 1 296 -17 23 0 0 0 chr5 120111744 120111767 -79518383 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 120112113 120112137 -79518013 + AT_rich Low_complexity Low_complexity 1 24 0 573 256 58 32 chr5 120116465 120116621 -79513529 - MER5B DNA MER1_type -16 162 3 1632 150 38 50 chr5 120116807 120117147 -79513003 + MER2 DNA MER2_type 1 336 -9 208 277 96 21 chr5 120117246 120117340 -79512810 + MIR3 SINE MIR 106 206 -2 853 241 31 0 chr5 120119355 120119550 -79510600 - MIR SINE MIR 0 262 62 741 224 47 0 chr5 120120879 120121071 -79509079 - MER20 DNA MER1_type 0 219 19 1687 0 35 10 chr5 120121678 120121877 -79508273 - L1PA2 LINE L1 -3 6152 5949 702 0 0 0 chr5 120121877 120121960 -79508190 + L1PA3 LINE L1 5749 5831 -324 2092 91 56 7 chr5 120122076 120122361 -79507789 - AluSp SINE Alu -14 299 1 19471 142 28 21 chr5 120123986 120128699 -79501451 + L1PA11 LINE L1 1433 6174 0 2094 128 10 13 chr5 120128902 120129215 -79500935 - AluSx SINE Alu 0 312 1 279 0 0 0 chr5 120129353 120129384 -79500766 + (TG)n Simple_repeat Simple_repeat 2 32 0 192 314 39 0 chr5 120129542 120129593 -79500557 + L2 LINE L2 3212 3264 -8 926 185 0 0 chr5 120129961 120130118 -79500032 + L1PB4 LINE L1 6000 6156 0 194 343 96 36 chr5 120131591 120131757 -79498393 - MIR3 SINE MIR -30 178 3 544 202 43 101 chr5 120137077 120137285 -79492865 + MER113 DNA MER1_type? 227 422 -99 218 185 0 74 chr5 120137356 120137410 -79492740 - MIR3 SINE MIR -49 159 110 230 182 23 0 chr5 120138151 120138195 -79491955 + L2 LINE L2 3267 3311 -2 243 0 0 0 chr5 120143421 120143448 -79486702 + (T)n Simple_repeat Simple_repeat 1 27 0 330 252 55 55 chr5 120144666 120144793 -79485357 + MIR SINE MIR 19 145 -63 3151 121 62 8 chr5 120145326 120145823 -79484327 + MER1A DNA MER1_type 3 526 -1 560 207 27 9 chr5 120146267 120146378 -79483772 + FLAM_A SINE Alu 1 113 -29 261 198 35 12 chr5 120146411 120146497 -79483653 + GA-rich Low_complexity Low_complexity 2 89 0 197 290 87 0 chr5 120146734 120146803 -79483347 - MIR SINE MIR -70 192 118 23 0 0 0 chr5 120148454 120148477 -79481673 + AT_rich Low_complexity Low_complexity 1 23 0 585 290 127 32 chr5 120148995 120149467 -79480683 + L1MC4 LINE L1 3626 4142 -2004 180 111 0 0 chr5 120149529 120149556 -79480594 + (CA)n Simple_repeat Simple_repeat 2 28 0 365 20 0 39 chr5 120149783 120149834 -79480316 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 411 286 112 40 chr5 120149869 120150173 -79479977 + L1MC4 LINE L1 5292 5617 -2191 219 140 0 0 chr5 120150404 120150454 -79479696 + (GA)n Simple_repeat Simple_repeat 2 51 0 5784 105 3 43 chr5 120151340 120152614 -79477536 + L1PA13 LINE L1 4938 6158 -5 2228 90 20 7 chr5 120152625 120152925 -79477225 + AluSp SINE Alu 1 304 -9 1781 255 92 97 chr5 120153016 120155210 -79474940 + L1MC4a LINE L1 4407 5288 -858 1792 83 4 0 chr5 120155242 120155483 -79474667 + L1PA13 LINE L1 5903 6144 -19 479 184 23 17 chr5 120155489 120155663 -79474487 + GA-rich Low_complexity Low_complexity 4 178 0 5627 64 17 18 chr5 120155692 120156459 -79473691 + MER4E LTR ERV1 1 766 0 2181 232 91 43 chr5 120156485 120157649 -79472501 + L1MC4 LINE L1 6702 8036 -6 272 320 59 50 chr5 120158079 120158298 -79471852 - L2 LINE L2 -1729 1585 1365 609 279 170 4 chr5 120158312 120158541 -79471609 + L3 LINE CR1 1205 1471 -106 1700 133 77 14 chr5 120158581 120158867 -79471283 + AluSx SINE Alu 1 304 -8 198 0 0 0 chr5 120159305 120159327 -79470823 + (TG)n Simple_repeat Simple_repeat 2 23 0 245 309 32 11 chr5 120159349 120159443 -79470707 - L1ME LINE L1 -401 5769 5674 450 204 104 10 chr5 120159703 120159912 -79470238 - MER5C DNA MER1_type -3 321 2 336 320 125 14 chr5 120159916 120160213 -79469937 - L1ME LINE L1 -514 5648 5319 243 261 0 0 chr5 120160322 120160391 -79469759 - L1P LINE L1 -2386 3760 3692 591 350 45 21 chr5 120160486 120160969 -79469181 - L1ME LINE L1 -2562 3584 3090 258 32 0 0 chr5 120161164 120161195 -79468955 + (TA)n Simple_repeat Simple_repeat 2 32 0 1995 276 31 22 chr5 120161231 120161906 -79468244 - L1ME3A LINE L1 -124 6029 5349 424 276 123 30 chr5 120162091 120162359 -79467791 - L1ME3A LINE L1 -4862 1257 965 242 332 26 84 chr5 120162366 120162556 -79467594 + L2 LINE L2 2860 3038 -275 374 214 31 0 chr5 120162556 120162654 -79467496 + L1M4 LINE L1 2932 3032 -3114 1539 273 100 52 chr5 120162669 120163245 -79466905 + L1M4 LINE L1 3155 3702 -2444 249 108 0 0 chr5 120163245 120163282 -79466868 + (TATG)n Simple_repeat Simple_repeat 2 38 0 1539 273 100 52 chr5 120163282 120164399 -79465751 + L1M4 LINE L1 3702 4940 -1206 1874 112 28 28 chr5 120165016 120165102 -79465048 + AluSq SINE Alu 1 86 -228 1483 192 170 34 chr5 120165102 120165550 -79464600 - LTR22 LTR ERVK 0 509 1 1874 112 28 28 chr5 120165550 120165777 -79464373 + AluSq SINE Alu 85 314 0 22 0 0 0 chr5 120166930 120166952 -79463198 + AT_rich Low_complexity Low_complexity 1 22 0 313 309 154 6 chr5 120167021 120167196 -79462954 - MIR SINE MIR -59 203 3 240 331 18 60 chr5 120168380 120168546 -79461604 + L2 LINE L2 2957 3115 -157 3595 181 0 12 chr5 120170127 120170817 -79459333 + L1PA13 LINE L1 3906 4587 -1559 5619 99 38 8 chr5 120171219 120172699 -79457451 + L1PA13 LINE L1 4670 6160 -3 295 219 16 130 chr5 120172770 120172893 -79457257 + MER102b DNA MER1_type 233 341 0 1956 164 0 0 chr5 120174421 120174725 -79455425 - AluSx SINE Alu -8 304 1 1535 257 60 47 chr5 120175052 120175775 -79454375 + L1ME2 LINE L1 4511 5242 -904 368 302 43 0 chr5 120175807 120175923 -79454227 + L1ME2 LINE L1 5544 5664 -502 1354 199 91 29 chr5 120175936 120176308 -79453842 + L1ME2 LINE L1 5779 6332 -2 41269 64 3 1 chr5 120176606 120182736 -79447414 - L1PA5 LINE L1 -8 6146 2 293 120 0 0 chr5 120183336 120183386 -79446764 + L1MA3 LINE L1 6256 6305 0 280 328 57 25 chr5 120183742 120183864 -79446286 + L2 LINE L2 3186 3311 -2 455 325 7 7 chr5 120184200 120184354 -79445796 + MIR3 SINE MIR 39 193 -15 204 321 29 29 chr5 120184966 120185103 -79445047 + L2 LINE L2 2685 2821 -493 3539 123 0 4 chr5 120185364 120185876 -79444274 + MER9 LTR ERVK 2 511 0 487 301 144 20 chr5 120186318 120186673 -79443477 + L1MEc LINE L1 802 1200 -5196 234 257 48 76 chr5 120186721 120186931 -79443219 + L1MEc LINE L1 1184 1387 -4828 5213 125 11 11 chr5 120186935 120187772 -79442378 - L1PA12 LINE L1 -1 6167 5331 287 257 126 33 chr5 120187876 120188059 -79442091 + L1MEc LINE L1 1585 1784 -4612 5215 209 22 24 chr5 120188490 120189025 -79441125 + L1MEc LINE L1 2264 2799 -3416 2441 86 0 6 chr5 120189025 120189338 -79440812 + AluY SINE Alu 1 311 0 5215 209 22 24 chr5 120189338 120190206 -79439944 + L1MEc LINE L1 2799 3686 -2529 * 24955 148 22 14 chr5 120190203 120196527 -79433623 + L1PA8A LINE L1 3 6445 -1 6372 170 9 74 chr5 120196525 120198030 -79432120 + L1P LINE L1 3603 5009 -1137 * 5670 143 21 8 chr5 120198030 120198371 -79431779 + L1PA13 LINE L1 4620 4955 -1208 3665 109 0 4 chr5 120198371 120198884 -79431266 - MER9 LTR ERVK 0 511 1 5670 143 21 8 chr5 120198884 120200029 -79430121 + L1PA13 LINE L1 4955 6122 -41 1579 148 61 71 chr5 120200029 120200408 -79429742 - THE1C LTR MaLR 0 375 1 815 126 21 21 chr5 120200408 120200551 -79429599 - THE1C-int LTR MaLR 0 1580 1438 7545 136 90 13 chr5 120200551 120201857 -79428293 - THE1C-int LTR MaLR -38 1542 136 2350 280 82 54 chr5 120201847 120203569 -79426581 + L1ME3 LINE L1 2540 4213 -1933 * 779 180 0 0 chr5 120203569 120203697 -79426453 + FLAM_C SINE Alu 1 128 -5 2350 280 82 54 chr5 120203697 120203845 -79426305 + L1ME3 LINE L1 4213 4355 -1791 2366 94 0 0 chr5 120203845 120204142 -79426008 - AluSg SINE Alu -13 297 1 2350 280 82 54 chr5 120204142 120204351 -79425799 + L1ME3 LINE L1 4355 4677 -1469 1448 272 88 22 chr5 120204497 120205383 -79424767 + L1ME3 LINE L1 5107 6058 -104 344 297 122 53 chr5 120206966 120207229 -79422921 - MLT1H LTR MaLR -228 321 41 263 178 0 0 chr5 120209075 120209137 -79421013 + L1ME LINE L1 5592 5653 -468 278 314 214 19 chr5 120210223 120210433 -79419717 - MIR SINE MIR -2 260 10 295 247 111 37 chr5 120210575 120210656 -79419494 + L2 LINE L2 3211 3297 -16 598 174 15 53 chr5 120210693 120210825 -79419325 - AluJb SINE Alu -9 303 177 450 315 44 6 chr5 120211694 120211875 -79418275 - MIR SINE MIR -62 200 13 1604 157 94 26 chr5 120212137 120212487 -79417663 - THE1C LTR MaLR 0 375 2 383 192 13 0 chr5 120212737 120212815 -79417335 + MLT2B1 LTR ERVL 40 118 -402 2254 183 22 7 chr5 120212821 120213225 -79416925 - MSTB LTR MaLR -16 410 1 2677 58 0 3 chr5 120213257 120213660 -79416490 - L1P3 LINE L1 -558 5596 5195 * 11742 87 13 2 chr5 120213655 120215301 -79414849 + L1P3 LINE L1 3518 5180 -966 1471 134 1 8 chr5 120215299 120215668 -79414482 - L1P5 LINE L1 -676 5475 5110 * 340 254 42 0 chr5 120215668 120215739 -79414411 + Tigger3(Golem) DNA MER2_type 2965 3038 0 5911 168 21 6 chr5 120216006 120217929 -79412221 - L1PB4 LINE L1 -3 6153 4200 254 308 0 0 chr5 120218029 120218107 -79412043 + L1ME LINE L1 5735 5812 -309 21 82 0 0 chr5 120218304 120218353 -79411797 + AT_rich Low_complexity Low_complexity 1 49 0 7210 41 6 1 chr5 120219090 120220601 -79409549 + L1PA4 LINE L1 4637 6153 -2 228 289 50 41 chr5 120220636 120220757 -79409393 - L2 LINE L2 0 3313 3192 493 241 9 9 chr5 120220774 120220886 -79409264 - MER91B DNA MER1_type -51 139 28 2328 121 16 29 chr5 120220910 120221289 -79408861 + THE1C LTR MaLR 2 375 0 12853 156 32 21 chr5 120222050 120224438 -79405712 - Tigger1 DNA MER2_type 0 2418 5 4234 167 35 35 chr5 120226477 120227665 -79402485 - L1MC1 LINE L1 0 6333 5186 276 77 0 0 chr5 120228511 120228550 -79401600 + (A)n Simple_repeat Simple_repeat 1 39 0 358 312 103 34 chr5 120229146 120229380 -79400770 + MER102b DNA MER1_type 92 341 0 1062 241 17 4 chr5 120229543 120229775 -79400375 + L1M4 LINE L1 562 796 -5746 8840 170 27 54 chr5 120229789 120232145 -79398005 - L1M2 LINE L1 -517 5783 3507 1592 187 21 3 chr5 120232145 120232429 -79397721 - AluJb SINE Alu -23 289 1 8840 170 27 54 chr5 120232429 120232561 -79397589 - L1M2 LINE L1 -2793 3507 3373 270 73 0 0 chr5 120232878 120232919 -79397231 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 328 308 164 19 chr5 120233978 120234137 -79396013 + MIR3 SINE MIR 21 202 -6 22 0 0 0 chr5 120234410 120234432 -79395718 + AT_rich Low_complexity Low_complexity 1 22 0 260 143 63 32 chr5 120234691 120234754 -79395396 + GA-rich Low_complexity Low_complexity 4 68 0 278 295 72 50 chr5 120236776 120236915 -79393235 + MIR3 SINE MIR 22 163 -45 195 114 0 0 chr5 120237198 120237233 -79392917 + (TG)n Simple_repeat Simple_repeat 2 36 0 824 311 69 29 chr5 120237270 120237688 -79392462 - MLT1L LTR MaLR -132 483 49 9996 155 25 6 chr5 120238005 120239653 -79390497 - Tigger1 DNA MER2_type -733 1685 6 1963 212 15 12 chr5 120240164 120240574 -79389576 + LTR57 LTR ERVL 1 411 0 800 293 91 23 chr5 120240639 120240991 -79389159 + L2 LINE L2 2932 3307 -6 675 187 33 13 chr5 120241212 120241362 -79388788 + L1M4 LINE L1 38 190 -6352 454 270 49 43 chr5 120241567 120241752 -79388398 + MER110 LTR ERV1 286 471 -20 227 297 99 0 chr5 120241821 120241912 -79388238 + L2 LINE L2 3173 3272 0 385 210 20 30 chr5 120243645 120243745 -79386405 - MIR SINE MIR -83 125 27 674 199 84 36 chr5 120246720 120246886 -79383264 - MLT1F1 LTR MaLR 0 567 394 342 269 69 69 chr5 120248506 120248766 -79381384 + MLT1I LTR MaLR 116 375 -34 1034 287 36 14 chr5 120249028 120249449 -79380701 + L1MCc LINE L1 24 453 -5970 366 260 16 49 chr5 120249669 120249792 -79380358 + L1MCc LINE L1 824 942 -5481 212 236 90 0 chr5 120252322 120252411 -79377739 + L2 LINE L2 2934 3030 -242 1685 137 42 11 chr5 120252670 120252933 -79377217 + AluSg SINE Alu 1 271 -39 412 198 27 54 chr5 120253360 120253471 -79376679 + MER103 DNA DNA 14 121 -45 200 203 27 81 chr5 120253675 120253749 -79376401 - L3 LINE CR1 -691 886 817 21 0 0 0 chr5 120254761 120254782 -79375368 + AT_rich Low_complexity Low_complexity 1 21 0 212 0 0 35 chr5 120254856 120254885 -79375265 + (GGAGAA)n Simple_repeat Simple_repeat 1 28 0 578 139 104 9 chr5 120254887 120255002 -79375148 - FLAM_A SINE Alu -11 131 6 994 215 15 2 chr5 120256013 120256258 -79373892 + L1MB7 LINE L1 5780 6010 -174 315 299 41 0 chr5 120256498 120256595 -79373555 - MIR SINE MIR -102 160 60 225 195 0 0 chr5 120256728 120256769 -79373381 + CT-rich Low_complexity Low_complexity 2 42 0 1166 220 66 3 chr5 120256778 120257082 -79373068 - L1MC2 LINE L1 -2 6342 6020 22 35 0 0 chr5 120257092 120257121 -79373029 + AT_rich Low_complexity Low_complexity 1 29 0 246 133 60 36 chr5 120259147 120259230 -79370920 + A-rich Low_complexity Low_complexity 5 89 0 3220 169 19 3 chr5 120259758 120260331 -79369819 - L1MB5 LINE L1 0 6174 5593 1215 83 0 0 chr5 120260335 120260491 -79369659 - AluY SINE Alu 0 311 156 243 0 0 0 chr5 120260803 120260830 -79369320 + (T)n Simple_repeat Simple_repeat 1 27 0 828 210 73 0 chr5 120261322 120261541 -79368609 - MIR SINE MIR -5 257 23 293 305 123 0 chr5 120261701 120261855 -79368295 + MER5B DNA MER1_type 1 173 -5 * 340 254 61 26 chr5 120261832 120261946 -79368204 + MIR SINE MIR 30 147 -115 612 264 13 0 chr5 120262093 120262248 -79367902 - MLT1B LTR MaLR -15 375 219 2162 102 23 20 chr5 120262757 120263060 -79367090 - AluSx SINE Alu -8 304 1 232 288 0 0 chr5 120263697 120263756 -79366394 - MER45 DNA AcHobo -62 116 58 534 349 72 25 chr5 120264261 120264938 -79365212 - L1M4 LINE L1 -2348 3798 3090 2011 136 3 7 chr5 120265433 120265741 -79364409 + AluSx SINE Alu 1 307 -5 2232 162 61 29 chr5 120265744 120266200 -79363950 + L1MA6 LINE L1 5827 6297 -3 1643 156 3 25 chr5 120266205 120266532 -79363618 + L1 LINE L1 4747 5066 -1080 195 114 0 0 chr5 120266791 120266826 -79363324 + (TG)n Simple_repeat Simple_repeat 2 36 0 814 313 67 26 chr5 120266863 120267281 -79362869 - MLT1L LTR MaLR -132 483 49 3794 133 18 42 chr5 120267598 120268333 -79361817 - Tigger1 DNA MER2_type -733 1685 969 13305 153 37 22 chr5 120269050 120271428 -79358722 - Tigger1 DNA MER2_type 0 2418 6 1973 212 15 12 chr5 120271939 120272349 -79357801 + LTR57 LTR ERVL 1 411 0 789 296 91 23 chr5 120272414 120272766 -79357384 + L2 LINE L2 2932 3307 -6 708 201 111 47 chr5 120272987 120273221 -79356929 + L1M4 LINE L1 38 286 -6256 454 270 49 43 chr5 120273342 120273527 -79356623 + MER110 LTR ERV1 286 471 -20 215 236 18 0 chr5 120273631 120273686 -79356464 + L2 LINE L2 3217 3272 0 232 333 0 0 chr5 120274432 120274482 -79355668 + GA-rich Low_complexity Low_complexity 2 54 -16 1793 172 0 29 chr5 120274482 120274796 -79355354 + AluJo SINE Alu 1 305 -7 232 333 0 0 chr5 120274796 120274814 -79355336 + GA-rich Low_complexity Low_complexity 53 70 0 9381 84 14 25 chr5 120275762 120282100 -79348050 + L1PA6 LINE L1 11 8341 0 189 226 170 0 chr5 120282429 120282482 -79347668 - MER5B DNA MER1_type -111 67 6 474 343 114 22 chr5 120283465 120283870 -79346280 - L2 LINE L2 -1 3312 2871 568 211 33 7 chr5 120283916 120284068 -79346082 + L1MC4 LINE L1 7684 7839 -203 222 204 0 0 chr5 120284068 120284112 -79346038 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 8481 161 48 4 chr5 120284117 120286681 -79343469 - L1MA5A LINE L1 -19 7299 4638 7351 229 33 6 chr5 120286681 120288171 -79341979 - L1MA5A LINE L1 -4997 2171 642 1224 174 36 24 chr5 120288228 120288475 -79341675 + L1MD2 LINE L1 5742 5991 -368 189 376 68 0 chr5 120289101 120289218 -79340932 + L2 LINE L2 3189 3313 0 * 264 170 0 0 chr5 120289193 120289246 -79340904 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 315 243 113 79 chr5 120289381 120289558 -79340592 - MIR SINE MIR -54 208 26 2070 125 57 26 chr5 120289558 120289910 -79340240 - THE1B LTR MaLR 0 364 2 1631 227 67 55 chr5 120290249 120290774 -79339376 - MER68 LTR ERV1 -31 531 1 554 308 62 72 chr5 120291297 120291790 -79338360 + HAL1b LINE L1 -16 239 -1092 219 88 0 0 chr5 120291790 120291824 -79338326 + (CA)n Simple_repeat Simple_repeat 1 34 0 554 308 62 72 chr5 120291824 120292001 -79338149 + HAL1b LINE L1 239 416 -915 2385 229 24 11 chr5 120292189 120292822 -79337328 + L1M4 LINE L1 4420 5060 -1086 1163 236 36 0 chr5 120292836 120293061 -79337089 + L1PA13 LINE L1 1 233 -6554 6573 188 26 21 chr5 120293078 120294554 -79335596 + L1P LINE L1 2359 3841 -2305 2204 100 24 15 chr5 120294560 120294890 -79335260 + L1PA13 LINE L1 5639 5971 -192 323 108 0 31 chr5 120294890 120294955 -79335195 + L1PA15 LINE L1 6103 6165 0 684 274 12 20 chr5 120294955 120295197 -79334953 + L1M4 LINE L1 5050 5291 -855 586 119 0 0 chr5 120295385 120295469 -79334681 - AluS SINE Alu -227 85 2 278 125 0 0 chr5 120295470 120295510 -79334640 + MSTA LTR MaLR 389 428 0 872 229 40 40 chr5 120295808 120296035 -79334115 - MER96B DNA MER1_type? -190 227 1 312 274 70 19 chr5 120296132 120296289 -79333861 - MIR3 SINE MIR -5 203 39 817 187 0 0 chr5 120296767 120296917 -79333233 + FAM SINE Alu 16 165 -20 1926 194 84 41 chr5 120296958 120297421 -79332729 - MLT1D LTR MaLR 0 505 23 227 309 15 0 chr5 120297489 120297557 -79332593 - L1MC/D LINE L1 -2239 5569 5501 288 243 14 0 chr5 120298369 120298439 -79331711 - MLT1D LTR MaLR -317 73 3 1416 246 137 12 chr5 120299861 120300344 -79329806 + L1MCc LINE L1 994 1536 -4887 1091 124 0 59 chr5 120300368 120300554 -79329596 + AluSx SINE Alu 1 175 -137 450 275 131 68 chr5 120300555 120300791 -79329359 + L1MCc LINE L1 1566 1816 -5125 910 245 59 43 chr5 120301028 120301400 -79328750 + L1MCc LINE L1 2129 2506 -4616 1164 157 102 4 chr5 120301533 120301769 -79328381 + L1MC2 LINE L1 6086 6344 0 195 167 0 0 chr5 120302417 120302459 -79327691 + GA-rich Low_complexity Low_complexity 2 43 0 2276 92 0 3 chr5 120302909 120303214 -79326936 - AluSg SINE Alu -2 308 5 702 131 8 41 chr5 120303453 120303603 -79326547 - FLAM_C SINE Alu 0 146 1 392 264 0 36 chr5 120303604 120303714 -79326436 - MLT2E LTR ERVL -488 140 35 1242 204 160 10 chr5 120306245 120306638 -79323512 + MLT1C LTR MaLR 6 457 -10 471 314 49 27 chr5 120306876 120307099 -79323051 + MIR SINE MIR 13 240 -22 275 188 0 145 chr5 120308440 120308557 -79321593 - L1ME LINE L1 -345 5776 5677 37 62 0 0 chr5 120308583 120308648 -79321502 + AT_rich Low_complexity Low_complexity 1 65 0 23 0 0 0 chr5 120308688 120308711 -79321439 + AT_rich Low_complexity Low_complexity 1 23 0 336 212 182 50 chr5 120308711 120309013 -79321137 - L1ME4a LINE L1 -11 6110 5769 352 274 117 62 chr5 120309239 120309471 -79320679 - L1ME LINE L1 -672 5449 5265 493 126 0 212 chr5 120309664 120309989 -79320161 - AluSg SINE Alu -3 307 52 264 256 31 8 chr5 120310675 120310731 -79319419 + MER58A DNA MER1_type 20 50 -165 2026 116 0 26 chr5 120310731 120311041 -79319109 - AluSg SINE Alu -8 302 1 264 256 31 8 chr5 120311041 120311070 -79319080 + MER58A DNA MER1_type 50 77 -138 2890 121 35 0 chr5 120311070 120311501 -79318649 - L1M1 LINE L1 -504 5801 5356 32 0 0 0 chr5 120312382 120312414 -79317736 + AT_rich Low_complexity Low_complexity 1 32 0 1360 236 91 2 chr5 120312482 120312902 -79317248 - Charlie4a DNA MER1_type -31 477 21 1921 121 14 0 chr5 120313331 120313612 -79316538 + AluSx SINE Alu 12 296 -16 399 189 0 0 chr5 120313622 120313696 -79316454 + L1MB8 LINE L1 6104 6177 -1 301 201 113 30 chr5 120313776 120313996 -79316154 + L1MD1 LINE L1 6089 7694 0 394 282 53 6 chr5 120314005 120314175 -79315975 + L1MC5 LINE L1 7703 7880 -81 749 127 0 17 chr5 120314231 120314349 -79315801 - FLAM_C SINE Alu -17 116 1 891 154 86 9 chr5 120314957 120315190 -79314960 + AluSx SINE Alu 58 308 -4 2114 217 41 48 chr5 120315191 120316103 -79314047 + L1ME1 LINE L1 4688 5593 -585 1105 197 18 13 chr5 120316103 120316331 -79313819 + AluJo SINE Alu 73 301 -11 2275 68 41 0 chr5 120316331 120316623 -79313527 + AluY SINE Alu 1 304 -7 969 262 72 28 chr5 120316628 120316991 -79313159 + L1ME1 LINE L1 5687 6065 -101 286 288 159 21 chr5 120318431 120318809 -79311341 + MLT1H1 LTR MaLR 110 555 0 2212 77 0 3 chr5 120319463 120319750 -79310400 + AluY SINE Alu 1 286 -25 42 71 0 0 chr5 120320100 120320184 -79309966 + AT_rich Low_complexity Low_complexity 1 84 0 37 97 0 0 chr5 120320245 120320359 -79309791 + AT_rich Low_complexity Low_complexity 1 114 0 769 188 122 53 chr5 120321279 120321449 -79308701 + MER33 DNA MER1_type 54 248 -2337 2216 71 0 0 chr5 120321449 120321754 -79308396 - AluSc SINE Alu 0 305 1 769 188 122 53 chr5 120321754 120321827 -79308323 + MER33 DNA MER1_type 248 315 -9 394 261 39 101 chr5 120322605 120322926 -79307224 + MLT1L LTR MaLR 208 420 -91 463 225 36 118 chr5 120323250 120323403 -79306747 - L1M4 LINE L1 -6241 301 180 2081 128 0 0 chr5 120323403 120323709 -79306441 - AluSq SINE Alu -7 306 1 463 225 36 118 chr5 120323709 120323835 -79306315 - L1M4 LINE L1 -6362 180 45 889 253 50 50 chr5 120324183 120324583 -79305567 - MLT1C LTR MaLR -24 443 45 930 267 43 49 chr5 120324797 120325145 -79305005 + MLT1H1 LTR MaLR 66 411 -144 1911 230 44 47 chr5 120325145 120325294 -79304856 - MER77 LTR ERV1 -8 597 449 1415 155 111 11 chr5 120325294 120325565 -79304585 + AluJb SINE Alu 2 299 -13 1911 230 44 47 chr5 120325565 120325987 -79304163 - MER77 LTR ERV1 -156 449 54 1946 228 31 35 chr5 120326759 120327307 -79302843 - MER99 DNA DNA -3 825 280 2509 43 0 3 chr5 120327545 120327846 -79302304 + L1PA6 LINE L1 5854 6153 -1 340 240 106 0 chr5 120328344 120328448 -79301702 - MER99 DNA DNA -702 126 12 434 111 20 30 chr5 120329212 120329311 -79300839 + (CTCA)n Simple_repeat Simple_repeat 2 99 0 308 164 0 55 chr5 120329362 120329490 -79300660 + (CTCA)n Simple_repeat Simple_repeat 2 122 0 283 213 21 53 chr5 120329605 120329699 -79300451 + (CTCA)n Simple_repeat Simple_repeat 1 91 0 572 252 41 0 chr5 120329907 120330054 -79300096 + MLT1A1 LTR MaLR 186 338 -27 505 244 42 0 chr5 120330178 120330297 -79299853 + LTR16C LTR ERVL 192 315 -176 472 227 21 0 chr5 120330299 120330396 -79299754 - MER45 DNA AcHobo -1457 124 26 240 306 0 0 chr5 120330472 120330534 -79299616 + MLT1K LTR MaLR 522 583 -5 1592 181 135 0 chr5 120330729 120331078 -79299072 - MSTD LTR MaLR 0 396 1 256 47 0 47 chr5 120331654 120331697 -79298453 - AluY SINE Alu -22 279 239 772 246 89 0 chr5 120332213 120332404 -79297746 - MIR SINE MIR -8 254 47 1710 161 54 82 chr5 120333072 120333543 -79296607 - THE1B LTR MaLR 0 428 1 213 186 304 10 chr5 120334295 120334397 -79295753 + L2 LINE L2 3141 3272 0 351 282 82 9 chr5 120334761 120334871 -79295279 - MIR SINE MIR -91 171 54 240 250 12 36 chr5 120335047 120335131 -79295019 + (TG)n Simple_repeat Simple_repeat 1 82 0 869 83 0 30 chr5 120337049 120337181 -79292969 - AluY SINE Alu -182 129 2 1589 218 18 5 chr5 120337182 120337563 -79292587 - L1M4 LINE L1 -1454 4692 4307 414 310 76 0 chr5 120337575 120337746 -79292404 + MLT1J2 LTR MaLR 267 450 0 259 353 43 72 chr5 120337768 120338003 -79292147 + L2 LINE L2 3044 3271 -1 417 328 32 65 chr5 120338044 120338291 -79291859 - MIR SINE MIR -18 244 6 554 206 0 19 chr5 120338525 120338632 -79291518 - MIR SINE MIR -69 139 35 2149 126 7 0 chr5 120339568 120339870 -79290280 - AluJo SINE Alu -8 304 1 717 189 0 0 chr5 120340093 120340252 -79289898 + (CA)n Simple_repeat Simple_repeat 2 160 0 1191 119 0 93 chr5 120344619 120344887 -79285263 + AluSx SINE Alu 1 243 -69 214 248 92 113 chr5 120345480 120345621 -79284529 - MIR SINE MIR -54 208 71 1526 206 50 11 chr5 120345747 120346107 -79284043 - MLT1B LTR MaLR -13 377 4 2332 85 23 16 chr5 120346140 120346447 -79283703 - AluY SINE Alu -1 310 2 784 229 30 0 chr5 120346983 120347184 -79282966 - MER58A DNA MER1_type -14 210 4 271 281 8 32 chr5 120348630 120348756 -79281394 - MIR SINE MIR -51 211 88 255 267 75 75 chr5 120349532 120349678 -79280472 - MER5A DNA MER1_type -6 183 38 223 294 54 43 chr5 120350464 120350556 -79279594 + MIR SINE MIR 48 140 -122 332 225 128 120 chr5 120351121 120351349 -79278801 + MLT1J LTR MaLR 113 347 -164 930 228 128 102 chr5 120351349 120351959 -79278191 + MLT1E2 LTR MaLR 1 626 0 332 225 128 120 chr5 120351959 120352104 -79278046 + MLT1J LTR MaLR 347 489 -22 305 252 139 43 chr5 120353166 120353281 -79276869 + MIR SINE MIR 28 153 -109 236 288 0 0 chr5 120353620 120353686 -79276464 + MLT1J LTR MaLR 109 174 -337 208 200 25 0 chr5 120354216 120354256 -79275894 + MIR SINE MIR 109 149 -113 376 294 138 31 chr5 120354346 120354673 -79275477 + L2 LINE L2 2908 3269 -3 255 316 26 8 chr5 120355241 120355358 -79274792 - MIR SINE MIR -79 183 65 316 275 142 37 chr5 120355438 120355639 -79274511 - MIR SINE MIR -14 248 17 612 227 26 67 chr5 120355725 120355919 -79274231 + MIR SINE MIR 17 202 -60 207 0 0 0 chr5 120357015 120357038 -79273112 + (CA)n Simple_repeat Simple_repeat 2 24 0 28 48 0 0 chr5 120358244 120358286 -79271864 + AT_rich Low_complexity Low_complexity 1 42 0 216 260 53 113 chr5 120359182 120359332 -79270818 + MIR SINE MIR 32 172 -90 307 296 97 18 chr5 120359444 120359670 -79270480 - LTR16C LTR ERVL -16 475 232 572 280 39 19 chr5 120361087 120361294 -79268856 + MLT1K LTR MaLR 375 585 -3 2021 130 7 27 chr5 120362351 120362652 -79267498 - AluSx SINE Alu -17 295 1 549 261 89 39 chr5 120362714 120362917 -79267233 + MIR SINE MIR 50 262 0 1014 263 75 77 chr5 120363788 120364524 -79265626 - L1MC5 LINE L1 -725 7236 6475 723 215 0 13 chr5 120364793 120364942 -79265208 - Tigger3(Golem) DNA MER2_type -13 3016 2870 2611 149 61 10 chr5 120365059 120365570 -79264580 - Tigger3(Golem) DNA MER2_type -98 2931 2395 676 200 113 27 chr5 120365567 120365717 -79264433 - Tigger3(Golem) DNA MER2_type -2866 163 1 * 312 271 102 54 chr5 120365856 120365952 -79264198 - L1MDa LINE L1 -4434 2106 1997 1962 161 10 7 chr5 120365952 120366262 -79263888 - AluJb SINE Alu -1 311 1 312 271 102 54 chr5 120366262 120366331 -79263819 - L1MDa LINE L1 -4543 1997 1933 187 250 59 0 chr5 120367335 120367403 -79262747 - MER5A DNA MER1_type -96 93 22 2460 206 82 8 chr5 120367980 120368591 -79261559 + L1MB5 LINE L1 5506 6161 -13 2491 64 7 0 chr5 120368599 120368896 -79261254 - AluSg SINE Alu -11 299 1 573 284 60 28 chr5 120369034 120369252 -79260898 - MIR SINE MIR -4 258 34 445 327 18 12 chr5 120369528 120369693 -79260457 - MIR SINE MIR -77 185 20 295 286 54 18 chr5 120369761 120369873 -79260277 - MIR SINE MIR -127 135 20 207 182 23 0 chr5 120370352 120370396 -79259754 + L2 LINE L2 3269 3313 0 453 227 9 9 chr5 120370476 120370586 -79259564 - MER94 DNA DNA -19 115 6 299 275 0 0 chr5 120370591 120370671 -79259479 - L1ME LINE L1 -500 5621 5542 353 296 78 35 chr5 120370941 120371083 -79259067 + MIR SINE MIR 41 188 -74 1306 168 46 112 chr5 120371725 120372029 -79258121 + AluJo SINE Alu 1 284 -28 292 170 27 18 chr5 120372040 120372121 -79258029 - MER4D LTR ERV1 -12 891 674 3305 159 65 12 chr5 120372241 120372884 -79257266 - MER4D LTR ERV1 -136 767 91 1724 138 0 4 chr5 120372888 120373142 -79257008 - AluSx SINE Alu -2 310 58 3771 122 4 12 chr5 120373142 120373701 -79256449 + MER41A LTR ERV1 1 554 0 432 150 0 0 chr5 120373701 120373761 -79256389 - AluSx SINE Alu -249 61 2 390 174 0 23 chr5 120373763 120373849 -79256301 - MER49 LTR ERV1 -829 94 11 283 100 0 0 chr5 120374191 120374231 -79255919 - L1MC1 LINE L1 -31 6302 6263 8061 133 6 7 chr5 120376181 120377455 -79252695 - HSMAR2 DNA Mariner -1 1301 30 256 322 85 17 chr5 120377477 120377595 -79252555 + L2 LINE L2 1313 1438 -1876 203 172 52 0 chr5 120377950 120378008 -79252142 + (TA)n Simple_repeat Simple_repeat 2 62 0 580 261 99 19 chr5 120378092 120378303 -79251847 - L2 LINE L2 0 3313 3086 476 0 0 33 chr5 120378520 120378581 -79251569 + (TTTTC)n Simple_repeat Simple_repeat 5 63 0 2188 122 10 6 chr5 120378584 120378896 -79251254 - AluSq SINE Alu 0 313 1 1903 120 4 18 chr5 120379017 120379291 -79250859 - AluSq SINE Alu -39 274 5 761 107 0 50 chr5 120379426 120379566 -79250584 + L1MD1 LINE L1 6091 6223 -19 559 260 117 8 chr5 120380393 120380658 -79249492 - MER113 DNA MER1_type? -147 374 81 1687 261 89 9 chr5 120380658 120381310 -79248840 + L1MC4 LINE L1 7196 7899 -143 261 0 0 0 chr5 120381316 120381345 -79248805 + (TG)n Simple_repeat Simple_repeat 2 30 0 190 0 67 0 chr5 120381345 120381375 -79248775 + (GA)n Simple_repeat Simple_repeat 2 33 0 3628 88 51 0 chr5 120381390 120381904 -79248246 + MER41A LTR ERV1 15 554 0 1208 246 114 16 chr5 120382272 120382703 -79247447 - LTR33 LTR ERVL -48 473 1 368 301 32 16 chr5 120382709 120382832 -79247318 + MIR SINE MIR 60 184 -78 219 297 44 33 chr5 120383046 120383137 -79247013 + MIR SINE MIR 148 239 -23 848 241 49 35 chr5 120383173 120383459 -79246691 + MLT1H LTR MaLR 58 347 -202 399 268 65 0 chr5 120383486 120383609 -79246541 + MLT1H LTR MaLR 419 549 0 391 260 42 0 chr5 120383741 120383837 -79246313 - MIR SINE MIR -55 207 108 3283 171 18 70 chr5 120384021 120384748 -79245402 - LTR8 LTR ERV1 0 691 3 4270 86 11 0 chr5 120384748 120385296 -79244854 - MER41A LTR ERV1 0 554 1 357 316 40 36 chr5 120385543 120385768 -79244382 - MLT1K LTR MaLR -356 232 7 268 306 15 0 chr5 120385927 120386028 -79244122 + MIR SINE MIR 53 154 -62 2802 150 31 33 chr5 120386375 120386947 -79243203 + LTR49 LTR ERV1 1 571 -24 2149 135 3 0 chr5 120387039 120387343 -79242807 + AluSx SINE Alu 1 305 -7 343 107 13 93 chr5 120387373 120387448 -79242702 - MER4B LTR ERV1 -540 70 2 409 235 59 0 chr5 120387451 120387553 -79242597 - MIR SINE MIR -36 226 119 3106 122 72 45 chr5 120387568 120387686 -79242464 - MER41A LTR ERV1 0 554 441 2444 75 0 10 chr5 120387686 120387992 -79242158 + AluSc SINE Alu 1 303 -6 3106 122 72 45 chr5 120387992 120388412 -79241738 - MER41A LTR ERV1 -113 441 1 497 229 28 28 chr5 120389243 120389422 -79240728 + L1M4 LINE L1 5075 5253 -893 290 113 0 19 chr5 120389879 120389932 -79240218 + (TG)n Simple_repeat Simple_repeat 1 52 0 278 247 10 31 chr5 120389933 120390030 -79240120 + (TATATG)n Simple_repeat Simple_repeat 6 100 0 247 255 0 21 chr5 120390036 120390130 -79240020 + L1MC4 LINE L1 6614 6705 -1337 188 200 17 0 chr5 120390476 120390536 -79239614 + (TG)n Simple_repeat Simple_repeat 1 61 0 2323 102 0 0 chr5 120390584 120390878 -79239272 - AluSg SINE Alu -16 294 1 326 232 0 24 chr5 120391355 120391437 -79238713 + MER116 DNA Mariner 1 80 0 2243 118 0 0 chr5 120391797 120392103 -79238047 - AluSx SINE Alu -6 306 1 444 291 93 57 chr5 120392514 120392988 -79237162 + LTR16C LTR ERVL 1 491 0 578 311 82 18 chr5 120393015 120393234 -79236916 + MIR SINE MIR 20 252 -10 2195 99 14 0 chr5 120393307 120393600 -79236550 - AluSg SINE Alu -13 297 1 211 272 38 44 chr5 120393902 120394060 -79236090 + MIR3 SINE MIR 42 198 -10 257 241 13 13 chr5 120394563 120394642 -79235508 + L1MC1 LINE L1 5835 5913 -431 328 207 0 101 chr5 120394733 120394931 -79235219 + (TA)n Simple_repeat Simple_repeat 2 179 0 256 185 22 43 chr5 120394934 120395026 -79235124 + L1MC4 LINE L1 6614 6703 -1339 4550 116 1 3 chr5 120395039 120395718 -79234432 + L1PA13 LINE L1 5483 6160 -3 2294 164 14 7 chr5 120395726 120396140 -79234010 + L1MC1 LINE L1 5917 6333 0 1235 234 20 70 chr5 120396361 120396921 -79233229 + L1MC5 LINE L1 6527 6996 -812 1352 213 50 9 chr5 120397219 120397539 -79232611 - MER58B DNA MER1_type -4 337 5 763 222 40 69 chr5 120397858 120398133 -79232017 - MLT1D LTR MaLR -238 267 1 424 318 200 27 chr5 120398306 120398813 -79231337 + L2 LINE L2 2723 3313 0 288 350 8 8 chr5 120399589 120399706 -79230444 + MIR3 SINE MIR 67 183 -25 23 0 0 0 chr5 120401084 120401107 -79229043 + AT_rich Low_complexity Low_complexity 1 23 0 451 338 59 17 chr5 120404164 120404401 -79225749 + MIR SINE MIR 2 248 -14 5031 167 57 15 chr5 120405031 120406381 -79223769 + L1MA6 LINE L1 4885 6300 0 255 31 0 0 chr5 120407351 120407383 -79222767 + (CAA)n Simple_repeat Simple_repeat 2 33 0 220 393 42 75 chr5 120409386 120409584 -79220566 + L2 LINE L2 2806 3009 -263 2619 95 28 3 chr5 120409584 120409973 -79220177 - L1MA1 LINE L1 0 6302 5904 220 393 42 75 chr5 120409973 120410229 -79219921 + L2 LINE L2 3009 3245 -27 604 246 53 21 chr5 120412250 120412437 -79217713 - MIR SINE MIR -38 224 32 333 261 48 42 chr5 120412663 120412713 -79217437 + L1ME LINE L1 5564 5612 -509 1776 171 137 13 chr5 120412713 120413094 -79217056 - MSTA LTR MaLR 0 428 1 333 261 48 42 chr5 120413094 120413208 -79216942 + L1ME LINE L1 5612 5729 -392 272 262 28 28 chr5 120413684 120413791 -79216359 + L1M4 LINE L1 4523 4629 -1517 1364 274 88 35 chr5 120413971 120415286 -79214864 + L1MEc LINE L1 2182 3607 -2608 1849 232 50 9 chr5 120415316 120415760 -79214390 + MLT1C LTR MaLR 6 467 0 2313 137 34 63 chr5 120415761 120416205 -79213945 - Tigger2a DNA MER2_type -3 431 1 408 279 191 56 chr5 120416246 120416939 -79213211 + L1MEc LINE L1 3673 4458 -1757 2137 35 0 8 chr5 120416955 120417242 -79212908 - L1PA3 LINE L1 0 6155 5896 5649 29 0 12 chr5 120417242 120418488 -79211662 + L1PA3 LINE L1 4660 5895 -260 1446 254 73 69 chr5 120418673 120419193 -79210957 + MER68 LTR ERV1 41 562 0 8028 86 5 7 chr5 120419674 120420748 -79209402 + MER11C LTR ERVK 1 1071 0 1642 245 18 23 chr5 120420984 120421420 -79208730 - MLT1C LTR MaLR 0 467 34 673 280 112 32 chr5 120421485 120421920 -79208230 + L1MCc LINE L1 1261 1898 -4889 2068 67 28 0 chr5 120422317 120422601 -79207549 + MER11B LTR ERVK 941 1232 -4 1457 248 35 21 chr5 120422834 120423262 -79206888 - MLT1C LTR MaLR 0 467 34 720 255 107 39 chr5 120423327 120423766 -79206384 + L1MCc LINE L1 1261 1898 -4889 239 349 24 0 chr5 120423769 120423895 -79206255 + L1MCc LINE L1 2390 2518 -4604 369 288 81 10 chr5 120423997 120424195 -79205955 + L1MCc LINE L1 2563 2774 -4348 513 158 96 27 chr5 120424218 120424364 -79205786 + MER33 DNA MER1_type 9 164 -160 27 29 0 0 chr5 120424371 120424405 -79205745 + AT_rich Low_complexity Low_complexity 1 34 0 409 182 61 67 chr5 120424408 120424573 -79205577 + MER33 DNA MER1_type 198 361 -2 5993 251 10 9 chr5 120424622 120426252 -79203898 + L1P LINE L1 2529 4160 -1986 408 264 108 27 chr5 120426259 120426407 -79203743 - MER96 DNA MER1_type? -15 160 1 955 276 70 17 chr5 120426408 120426766 -79203384 + L1ME3A LINE L1 5699 6075 -95 261 292 143 31 chr5 120427976 120428137 -79202013 + MIR SINE MIR 12 190 -72 1389 165 7 7 chr5 120428777 120429050 -79201100 - L1MA4 LINE L1 -1 6299 6027 2336 96 0 3 chr5 120429467 120429780 -79200370 - AluSq SINE Alu -1 312 1 259 191 0 0 chr5 120430953 120430995 -79199155 - MER103 DNA DNA -45 121 80 320 296 114 23 chr5 120431664 120431840 -79198310 - MLT1H LTR MaLR 0 555 364 425 309 17 22 chr5 120431913 120432091 -79198059 - MLT1H LTR MaLR -252 297 121 651 308 56 40 chr5 120433383 120433633 -79196517 - MIR SINE MIR -3 259 6 430 249 51 73 chr5 120434759 120434936 -79195214 + MER20B DNA MER1_type 4 176 -607 400 292 15 22 chr5 120435361 120435498 -79194652 - L2 LINE L2 -16 3297 3162 181 289 24 36 chr5 120436762 120436845 -79193305 - L2 LINE L2 -59 3254 3173 2474 60 0 13 chr5 120436859 120437158 -79192992 - AluY SINE Alu -15 296 2 2677 55 6 3 chr5 120437506 120437849 -79192301 - L1P3 LINE L1 -375 5779 5436 1319 79 14 70 chr5 120437849 120438063 -79192087 + L1PA7 LINE L1 5947 6148 -6 340 323 61 80 chr5 120439313 120439576 -79190574 - L2 LINE L2 -19 3253 2996 1050 221 78 29 chr5 120439590 120439856 -79190294 + MER5C DNA MER1_type 2 286 -38 2157 118 0 3 chr5 120439856 120440152 -79189998 - AluSx SINE Alu -17 295 1 1050 221 78 29 chr5 120440152 120440193 -79189957 + MER5C DNA MER1_type 286 324 0 284 324 128 26 chr5 120440376 120440944 -79189206 - L2 LINE L2 -1154 2160 1535 2198 97 7 0 chr5 120441843 120442133 -79188017 + AluSc SINE Alu 1 292 -17 423 250 140 75 chr5 120442150 120442266 -79187884 + Charlie8 DNA MER1_type 1 108 -233 2352 97 3 0 chr5 120442266 120442564 -79187586 + AluSp SINE Alu 3 301 -12 423 250 140 75 chr5 120442564 120442675 -79187475 + Charlie8 DNA MER1_type 108 243 -98 665 115 0 0 chr5 120442934 120443030 -79187120 - AluSg/x SINE Alu -6 304 209 31 58 0 0 chr5 120443085 120443137 -79187013 + AT_rich Low_complexity Low_complexity 1 52 0 813 298 122 25 chr5 120443605 120444215 -79185935 + L2 LINE L2 2583 3253 -60 22 35 0 0 chr5 120447327 120447356 -79182794 + AT_rich Low_complexity Low_complexity 1 29 0 213 330 128 98 chr5 120447474 120447832 -79182318 + L2 LINE L2 2896 3264 -8 5251 191 109 4 chr5 120448603 120449955 -79180195 + L1P LINE L1 2298 3790 -2356 11163 67 7 0 chr5 120450140 120451683 -79178467 + L1P LINE L1 3070 4623 -1523 5644 203 11 7 chr5 120451783 120453093 -79177057 + L1P LINE L1 3668 4983 -1163 1556 135 35 21 chr5 120453194 120453483 -79176667 + L1PA13 LINE L1 5868 6160 -3 639 75 11 0 chr5 120453534 120453627 -79176523 + L1MA1 LINE L1 6205 6298 -4 38 39 0 0 chr5 120453627 120453679 -79176471 + AT_rich Low_complexity Low_complexity 1 52 0 186 43 0 0 chr5 120453976 120453999 -79176151 + (TC)n Simple_repeat Simple_repeat 2 24 0 596 108 135 0 chr5 120454349 120454460 -79175690 + L1M2 LINE L1 5 130 -6719 * 2898 182 44 6 chr5 120454454 120455096 -79175054 + L1MA1 LINE L1 3868 4533 -1613 17615 52 1 5 chr5 120455196 120457593 -79172557 - L1P LINE L1 -1031 5115 2729 3928 111 13 9 chr5 120457780 120458413 -79171737 + L1PA6 LINE L1 5517 6151 -3 587 118 0 10 chr5 120458472 120458574 -79171576 - L1MA3 LINE L1 -1 6304 6204 961 242 16 19 chr5 120458579 120458955 -79171195 - L1MEc LINE L1 -3962 2434 2060 2144 150 0 0 chr5 120458968 120459275 -79170875 + AluSx SINE Alu 1 307 -5 21 57 0 0 chr5 120459275 120459310 -79170840 + AT_rich Low_complexity Low_complexity 1 35 0 1010 203 37 46 chr5 120459348 120459673 -79170477 - L1MEc LINE L1 -4347 2049 1728 450 233 33 44 chr5 120459709 120459889 -79170261 - L1MEc LINE L1 -4655 1741 1564 6821 119 20 20 chr5 120459990 120461766 -79168384 + L1MA1 LINE L1 4522 6293 -9 2172 235 42 7 chr5 120461784 120462439 -79167711 + L1M2 LINE L1 441 1505 -6061 2520 208 24 14 chr5 120462480 120463142 -79167008 + L1M2 LINE L1 3505 4179 -3386 12875 62 10 0 chr5 120463258 120465697 -79164453 + L1PA6 LINE L1 3700 6150 -4 2297 157 52 15 chr5 120465698 120466176 -79163974 + L1M2 LINE L1 5310 5805 -1760 17883 77 8 2 chr5 120466179 120468690 -79161460 + L1P LINE L1 13 2537 -3609 14912 109 25 6 chr5 120468790 120471114 -79159036 - L1P LINE L1 -3774 2372 5 2011 233 53 2 chr5 120471122 120471724 -79158426 + L1ME1 LINE L1 2328 2960 -3186 * 3646 237 34 11 chr5 120471720 120473443 -79156707 + L1ME1 LINE L1 4170 5935 -231 334 207 35 55 chr5 120473548 120473693 -79156457 + L1ME2 LINE L1 5895 6036 -128 216 299 0 15 chr5 120473757 120473824 -79156326 + CT-rich Low_complexity Low_complexity 1 66 0 399 198 103 0 chr5 120474150 120474266 -79155884 + L1MA10 LINE L1 6207 6334 0 2410 177 29 10 chr5 120475112 120475530 -79154620 - MSTB LTR MaLR 0 426 1 2418 127 16 5 chr5 120476105 120476475 -79153675 - THE1C LTR MaLR -1 374 1 10374 118 10 31 chr5 120476475 120478089 -79152061 - THE1C-int LTR MaLR 0 1580 1 2265 147 11 8 chr5 120478089 120478463 -79151687 - THE1C LTR MaLR 0 375 1 323 300 59 18 chr5 120478642 120478915 -79151235 - L1MEd LINE L1 -4788 1343 1060 324 188 0 0 chr5 120478972 120479041 -79151109 + (TA)n Simple_repeat Simple_repeat 1 69 0 1281 218 72 21 chr5 120479072 120479570 -79150580 - L1MEc LINE L1 -5169 1227 701 1827 187 3 0 chr5 120479570 120479870 -79150280 - AluJb SINE Alu -11 301 1 1281 218 72 21 chr5 120479870 120479885 -79150265 - L1MEc LINE L1 -5695 701 688 1282 282 117 42 chr5 120480150 120481111 -79149039 - L1MEd LINE L1 -5030 1089 57 899 300 46 22 chr5 120481160 120481573 -79148577 + Charlie7 DNA MER1_type 101 523 -2089 467 250 148 41 chr5 120481705 120481901 -79148249 + MIR SINE MIR 4 220 -42 1033 154 35 15 chr5 120482352 120482553 -79147597 - L1MB2 LINE L1 -18 6153 5949 32 26 0 0 chr5 120483364 120483403 -79146747 + AT_rich Low_complexity Low_complexity 1 39 0 525 298 11 31 chr5 120484493 120484684 -79145466 + MIR SINE MIR 64 250 -12 287 346 10 0 chr5 120484968 120485072 -79145078 - MIR SINE MIR -79 183 79 209 320 86 39 chr5 120485762 120485890 -79144260 + L2 LINE L2 3139 3272 0 2337 92 0 3 chr5 120486073 120486377 -79143773 + AluSg SINE Alu 1 303 -7 1726 108 103 142 chr5 120488663 120488843 -79141307 + MSTA LTR MaLR 1 186 -242 2318 46 0 3 chr5 120488843 120489165 -79140985 + AluY SINE Alu 1 321 0 1726 108 103 142 chr5 120489165 120489428 -79140722 + MSTA LTR MaLR 186 428 0 344 248 0 9 chr5 120489797 120489910 -79140240 + CT-rich Low_complexity Low_complexity 4 115 0 266 326 16 63 chr5 120490109 120490299 -79139851 + MIR3 SINE MIR 7 187 -21 4804 88 14 0 chr5 120490299 120490950 -79139200 - PABL_A LTR ERV1 0 660 1 292 280 0 13 chr5 120491017 120491092 -79139058 + CT-rich Low_complexity Low_complexity 1 74 0 229 250 83 0 chr5 120491137 120491209 -79138941 - MIR SINE MIR -61 147 70 218 263 74 64 chr5 120491589 120491687 -79138463 + MIR SINE MIR 47 144 -64 189 107 0 0 chr5 120491699 120491727 -79138423 + (TAA)n Simple_repeat Simple_repeat 2 29 0 437 243 47 9 chr5 120492573 120492680 -79137470 + MER81 DNA DNA 4 114 0 7518 54 0 2 chr5 120492972 120494161 -79135989 + L1PA4 LINE L1 4971 6155 0 2320 152 9 29 chr5 120494161 120494615 -79135535 + L1 LINE L1 4379 4823 -1323 7460 58 3 2 chr5 120494715 120496164 -79133986 + L1PA4 LINE L1 4741 6155 0 238 307 55 61 chr5 120496753 120496916 -79133234 - MIR SINE MIR -64 198 37 259 379 33 20 chr5 120497009 120497162 -79132988 - MIR3 SINE MIR -9 199 45 514 264 70 0 chr5 120497572 120497701 -79132449 - MER5A DNA MER1_type -34 155 18 382 254 15 42 chr5 120499390 120499523 -79130627 - L1ME LINE L1 -426 5695 5569 304 267 86 27 chr5 120499524 120499711 -79130439 - L1ME LINE L1 -712 5530 5333 293 80 0 20 chr5 120499787 120499837 -79130313 + (GGAA)n Simple_repeat Simple_repeat 4 52 0 223 171 0 0 chr5 120500502 120500543 -79129607 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 524 317 59 44 chr5 120500966 120501237 -79128913 - L2 LINE L2 -594 2720 2446 771 296 75 8 chr5 120501547 120501787 -79128363 - MIR SINE MIR 0 262 7 612 204 126 27 chr5 120503822 120504168 -79125982 - L1MC5 LINE L1 -47 7914 7455 1285 211 95 7 chr5 120504221 120504515 -79125635 + MLT1J2 LTR MaLR 1 320 -130 482 280 83 24 chr5 120504628 120504796 -79125354 + MER5B DNA MER1_type 1 178 0 3074 208 65 8 chr5 120505498 120506129 -79124021 + Charlie1a DNA MER1_type 1 667 -788 554 184 0 10 chr5 120506136 120506234 -79123916 + Charlie1a DNA MER1_type 1359 1455 0 223 197 16 82 chr5 120506235 120506296 -79123854 - MIR3 SINE MIR -49 159 103 566 293 85 11 chr5 120507026 120507577 -79122573 + MER115 DNA AcHobo 14 692 -1 554 263 76 54 chr5 120508219 120508443 -79121707 - MIR SINE MIR -15 247 19 267 212 93 132 chr5 120508448 120508637 -79121513 - MIR SINE MIR -75 187 15 203 328 0 15 chr5 120508965 120509032 -79121118 + MIR SINE MIR 16 81 -127 270 0 0 0 chr5 120510431 120510461 -79119689 + (TG)n Simple_repeat Simple_repeat 2 31 0 360 263 30 10 chr5 120510628 120510727 -79119423 + MIR SINE MIR 37 137 -71 2312 112 0 0 chr5 120512292 120512605 -79117545 + AluSp SINE Alu 1 313 0 204 141 59 12 chr5 120513974 120514059 -79116091 + (TA)n Simple_repeat Simple_repeat 2 90 0 270 115 0 0 chr5 120514112 120514164 -79115986 + (TA)n Simple_repeat Simple_repeat 1 52 0 2645 147 31 5 chr5 120514641 120515062 -79115088 + MSTB1 LTR MaLR 1 432 0 5104 229 10 4 chr5 120515063 120516117 -79114033 + MSTB1-int LTR MaLR 2 1062 -589 1120 181 20 55 chr5 120516113 120516367 -79113783 + L1MA9 LINE L1 3987 4231 -1915 * 4847 148 28 59 chr5 120516371 120517322 -79112828 + L1MA9 LINE L1 5391 6312 0 236 331 161 0 chr5 120518574 120518698 -79111452 - MIR3 SINE MIR -24 184 41 1949 163 71 31 chr5 120519433 120519783 -79110367 + THE1B LTR MaLR 1 364 0 262 293 93 0 chr5 120520034 120520109 -79110041 + MIR SINE MIR 60 141 -121 257 292 143 31 chr5 120521249 120521410 -79108740 + MIR SINE MIR 12 190 -72 1496 165 7 7 chr5 120522050 120522323 -79107827 - L1MA4 LINE L1 -1 6299 6027 2353 96 0 3 chr5 120522740 120523053 -79107097 - AluSq SINE Alu -1 312 1 266 191 0 0 chr5 120524226 120524268 -79105882 - MER103 DNA DNA -45 121 80 327 296 114 23 chr5 120524937 120525113 -79105037 - MLT1H LTR MaLR 0 555 364 422 309 17 22 chr5 120525186 120525364 -79104786 - MLT1H LTR MaLR -252 297 121 636 308 56 40 chr5 120526656 120526906 -79103244 - MIR SINE MIR -3 259 6 437 249 51 73 chr5 120528032 120528209 -79101941 + MER20B DNA MER1_type 4 176 -607 394 292 15 22 chr5 120528634 120528771 -79101379 - L2 LINE L2 -16 3297 3162 2489 60 0 13 chr5 120530132 120530431 -79099719 - AluY SINE Alu -15 296 2 2745 55 6 3 chr5 120530779 120531122 -79099028 - L1P3 LINE L1 -375 5779 5436 1425 79 14 70 chr5 120531122 120531336 -79098814 + L1PA7 LINE L1 5947 6148 -6 327 323 61 80 chr5 120532586 120532849 -79097301 - L2 LINE L2 -19 3253 2996 1000 224 78 29 chr5 120532863 120533129 -79097021 + MER5C DNA MER1_type 2 286 -38 2168 118 0 3 chr5 120533129 120533425 -79096725 - AluSx SINE Alu -17 295 1 1000 224 78 29 chr5 120533425 120533466 -79096684 + MER5C DNA MER1_type 286 324 0 237 313 137 35 chr5 120533649 120534217 -79095933 - L2 LINE L2 -1154 2160 1535 2207 97 7 0 chr5 120535116 120535406 -79094744 + AluSc SINE Alu 1 292 -17 500 237 162 79 chr5 120535423 120535539 -79094611 + Charlie8 DNA MER1_type 1 106 -235 2349 97 3 0 chr5 120535539 120535837 -79094313 + AluSp SINE Alu 3 301 -12 500 237 162 79 chr5 120535837 120535973 -79094177 + Charlie8 DNA MER1_type 106 274 -67 709 115 0 0 chr5 120536207 120536303 -79093847 - AluSg/x SINE Alu -6 304 209 31 58 0 0 chr5 120536358 120536410 -79093740 + AT_rich Low_complexity Low_complexity 1 52 0 808 294 124 27 chr5 120536878 120537488 -79092662 + L2 LINE L2 2583 3253 -60 22 35 0 0 chr5 120540600 120540629 -79089521 + AT_rich Low_complexity Low_complexity 1 29 0 196 330 128 98 chr5 120540747 120541105 -79089045 + L2 LINE L2 2896 3264 -8 1868 186 99 10 chr5 120541955 120542370 -79087780 - L1M4 LINE L1 -1016 5130 4679 * 37017 41 21 2 chr5 120542368 120548397 -79081753 + L1PA3 LINE L1 1 6154 -1 1966 203 39 37 chr5 120548407 120548979 -79081171 - L1M4 LINE L1 -1455 4691 4119 229 328 0 16 chr5 120549174 120549238 -79080912 + MIR3 SINE MIR 110 172 -36 1570 158 27 13 chr5 120550075 120550487 -79079663 + L1M4 LINE L1 5042 5464 -710 21 0 0 0 chr5 120551578 120551599 -79078551 + AT_rich Low_complexity Low_complexity 1 21 0 318 277 113 14 chr5 120551962 120552208 -79077942 + L1M4 LINE L1 5161 5431 -743 1017 236 94 110 chr5 120552274 120552896 -79077254 - MLT1G LTR MaLR -2 588 22 6381 68 5 9 chr5 120553006 120553867 -79076283 + L1PA7 LINE L1 5298 6154 0 22 35 0 0 chr5 120554326 120554355 -79075795 + AT_rich Low_complexity Low_complexity 1 29 0 433 277 62 8 chr5 120555404 120555534 -79074616 - MIR3 SINE MIR -4 204 68 910 194 11 26 chr5 120555657 120555848 -79074302 + MER5A DNA MER1_type 2 189 0 549 217 191 13 chr5 120555970 120556122 -79074028 - MER5A DNA MER1_type -7 182 4 2025 139 0 3 chr5 120557491 120557785 -79072365 - AluSg SINE Alu -17 293 1 25 31 0 0 chr5 120558313 120558345 -79071805 + AT_rich Low_complexity Low_complexity 1 32 0 2141 136 0 0 chr5 120558606 120558916 -79071234 + AluSx SINE Alu 1 310 -2 252 333 25 0 chr5 120559530 120559611 -79070539 - L2 LINE L2 0 3272 3190 341 307 51 89 chr5 120559617 120560156 -79069994 + MLT1K LTR MaLR 7 583 -5 13773 139 42 5 chr5 120560261 120562547 -79067603 - Tigger1 DNA MER2_type 0 2418 48 337 278 6 58 chr5 120562866 120563039 -79067111 + L1MC5 LINE L1 7022 7185 -776 378 289 89 50 chr5 120563234 120563797 -79066353 + L1MC5 LINE L1 7311 7895 -66 2447 81 3 0 chr5 120563798 120564108 -79066042 - AluY SINE Alu 0 311 1 2387 254 68 21 chr5 120565670 120566570 -79063580 + L1ME LINE L1 3543 4484 -1662 389 268 38 19 chr5 120566620 120566777 -79063373 + L1ME LINE L1 4952 5111 -1035 2223 181 93 32 chr5 120566778 120567346 -79062804 + pTR5 LTR ERV1 742 1344 -1094 4484 106 28 139 chr5 120567362 120568287 -79061863 + LTR12 LTR ERV1 5 826 0 1076 244 28 9 chr5 120568296 120568751 -79061399 + L1ME LINE L1 5119 5636 -530 255 322 99 13 chr5 120568810 120568962 -79061188 + MLT1L LTR MaLR 316 480 -135 1726 184 3 16 chr5 120569089 120569393 -79060757 - AluJb SINE Alu -12 300 1 731 261 43 28 chr5 120569762 120569973 -79060177 + MIR SINE MIR 1 214 -48 2249 98 38 49 chr5 120571106 120571474 -79058676 - THE1B LTR MaLR 0 364 1 275 260 55 0 chr5 120571573 120571646 -79058504 + MER1A DNA MER1_type 1 77 -450 * 2175 86 21 0 chr5 120571642 120571933 -79058217 + MER1A DNA MER1_type 233 529 0 25 51 0 0 chr5 120573221 120573260 -79056890 + AT_rich Low_complexity Low_complexity 1 39 0 572 305 27 11 chr5 120573627 120573814 -79056336 + MIR3 SINE MIR 6 195 -13 6420 138 138 94 chr5 120574727 120576356 -79053794 - pTR5 LTR ERV1 0 2438 738 2552 57 0 0 chr5 120576492 120576791 -79053359 + AluY SINE Alu 3 301 -10 2085 257 63 22 chr5 120579631 120580493 -79049657 + L1ME1 LINE L1 5194 6089 -77 527 304 28 6 chr5 120580867 120581048 -79049102 - Charlie8 DNA MER1_type -2163 254 70 280 133 0 0 chr5 120581957 120582002 -79048148 + MADE1 DNA Mariner 1 45 -35 312 284 86 30 chr5 120582137 120582334 -79047816 - MIR SINE MIR -54 208 1 211 376 65 44 chr5 120583232 120583644 -79046506 + L2 LINE L2 2066 2486 -828 386 201 12 0 chr5 120584860 120584959 -79045191 - L1MC4 LINE L1 0 8041 7898 2654 86 14 0 chr5 120584959 120585309 -79044841 - THE1A LTR MaLR 0 355 1 568 303 123 27 chr5 120585320 120586406 -79043744 - L1 LINE L1 -2060 4086 2896 1955 136 3 32 chr5 120586464 120586772 -79043378 - AluJb SINE Alu -13 299 1 24 0 0 0 chr5 120586776 120586800 -79043350 + AT_rich Low_complexity Low_complexity 1 24 0 407 280 97 41 chr5 120587057 120587341 -79042809 - L1 LINE L1 -3631 2515 2220 1601 193 0 20 chr5 120587482 120587777 -79042373 - AluJo SINE Alu -23 289 1 616 316 76 56 chr5 120588076 120588760 -79041390 - HAL1b LINE L1 -579 1713 100 2286 73 0 10 chr5 120589163 120589463 -79040687 + AluY SINE Alu 1 297 -14 372 22 0 0 chr5 120589511 120589556 -79040594 + (TG)n Simple_repeat Simple_repeat 2 46 0 1930 94 9 97 chr5 120590018 120590347 -79039803 - AluSq SINE Alu -13 300 1 186 43 0 0 chr5 120591633 120591656 -79038494 + (TA)n Simple_repeat Simple_repeat 1 23 0 4109 38 16 0 chr5 120591680 120592182 -79037968 - L1PA3 LINE L1 -3 6152 5643 361 317 140 23 chr5 120592219 120592569 -79037581 - L1M4 LINE L1 -2685 3461 3071 421 309 164 13 chr5 120593675 120594066 -79036084 - HAL1 LINE L1 -860 1647 1198 2860 91 68 7 chr5 120594149 120594591 -79035559 + LTR19A LTR ERV1 18 486 0 1106 117 56 0 chr5 120594591 120594753 -79035397 + LTR19A-int LTR ERV1 1 171 -5415 * 15642 56 46 40 chr5 120594748 120597139 -79033011 + LTR19A-int LTR ERV1 1975 4381 -1205 3373 79 0 13 chr5 120597134 120597601 -79032549 + LTR19A-int LTR ERV1 5126 5586 0 * 3005 100 47 0 chr5 120597601 120598052 -79032098 + LTR19A LTR ERV1 1 472 -14 23 0 0 0 chr5 120598591 120598614 -79031536 + AT_rich Low_complexity Low_complexity 1 23 0 377 279 49 88 chr5 120600467 120600671 -79029479 + MIR SINE MIR 7 202 -60 273 343 50 29 chr5 120602057 120602197 -79027953 - L2 LINE L2 -188 3084 2942 425 340 122 37 chr5 120602424 120603154 -79026996 - L2 LINE L2 -659 2655 1864 278 211 0 66 chr5 120603668 120603744 -79026406 + MER5B DNA MER1_type 107 177 -1 246 310 138 40 chr5 120604536 120604710 -79025440 + L2 LINE L2 2779 2969 -345 340 314 164 10 chr5 120605470 120605782 -79024368 + L1M4 LINE L1 3331 3690 -2456 267 266 0 37 chr5 120605890 120605999 -79024151 + L1M4 LINE L1 3822 3926 -2220 5789 105 28 7 chr5 120606112 120607568 -79022582 - L1PA13 LINE L1 0 6163 4675 473 363 74 5 chr5 120607728 120608149 -79022001 + L1M4 LINE L1 4116 4565 -1581 2064 105 52 0 chr5 120609051 120609337 -79020813 + AluSq SINE Alu 1 301 -12 286 262 200 5 chr5 120609715 120609925 -79020225 - L1ME4a LINE L1 -130 5991 5741 614 237 21 42 chr5 120610369 120610559 -79019591 - MER5A DNA MER1_type -3 186 1 451 203 16 94 chr5 120610588 120610716 -79019434 - L2 LINE L2 -36 3277 3160 504 249 129 5 chr5 120611579 120611796 -79018354 + MER112 DNA MER1_type 4 247 -13 191 319 89 57 chr5 120611905 120612062 -79018088 - L3b LINE CR1 -135 1448 1287 837 219 30 10 chr5 120612082 120612283 -79017867 + MER3 DNA MER1_type 5 209 0 2029 269 79 28 chr5 120614078 120615026 -79015124 + L2 LINE L2 2309 3304 -9 2260 176 29 0 chr5 120615440 120615856 -79014294 + MSTA LTR MaLR 1 428 0 8911 155 23 16 chr5 120615878 120616743 -79013407 + MSTA-int LTR MaLR 7 890 -761 2672 55 0 0 chr5 120616743 120617051 -79013099 - AluY SINE Alu -3 308 1 8911 155 23 16 chr5 120617051 120617814 -79012336 + MSTA-int LTR MaLR 890 1646 -5 2480 136 57 0 chr5 120617819 120618224 -79011926 + MSTA LTR MaLR 1 428 0 388 273 112 0 chr5 120618226 120618387 -79011763 + MIR SINE MIR 71 249 -13 642 201 40 0 chr5 120618780 120618929 -79011221 + MIR SINE MIR 79 233 -29 234 309 79 14 chr5 120619030 120619169 -79010981 + L2 LINE L2 3166 3313 0 257 334 96 35 chr5 120620041 120620184 -79009966 - MIR SINE MIR -63 145 4 1413 197 5 105 chr5 120620379 120620780 -79009370 + MLT1A1 LTR MaLR 5 365 0 615 258 93 26 chr5 120621665 120621859 -79008291 - MIR SINE MIR -43 219 13 363 281 59 15 chr5 120622846 120622981 -79007169 + MLT1L LTR MaLR 1 141 -474 244 281 18 0 chr5 120622990 120623047 -79007103 + MER58A DNA MER1_type 6 63 -161 707 141 33 0 chr5 120623160 120623281 -79006869 + MER6 DNA MER2_type 741 865 0 742 253 194 20 chr5 120623332 120623688 -79006462 + MLT1L LTR MaLR 146 563 -52 244 229 0 0 chr5 120623694 120623755 -79006395 - L1P LINE L1 -3700 2446 2386 3308 229 99 68 chr5 120623799 120625671 -79004479 - L1MEc LINE L1 -3887 2509 580 376 332 22 45 chr5 120625787 120626010 -79004140 + L2 LINE L2 2158 2375 -939 282 263 106 37 chr5 120626531 120626748 -79003402 + L1ME LINE L1 5549 5780 -341 265 264 101 8 chr5 120626888 120627017 -79003133 + HAL1b LINE L1 1201 1341 -7 1651 229 39 16 chr5 120628408 120628844 -79001306 - MLT1F LTR MaLR -95 447 2 712 269 15 10 chr5 120628965 120629162 -79000988 + MLT1G1 LTR MaLR 7 204 -391 319 326 15 30 chr5 120629215 120629347 -79000803 + MER5A DNA MER1_type 54 183 -6 1443 180 161 3 chr5 120629953 120630275 -78999875 - THE1C LTR MaLR -2 373 1 520 280 65 30 chr5 120630584 120630962 -78999188 + MER115 DNA AcHobo 2 433 -260 610 248 0 8 chr5 120631556 120631681 -78998469 + L2 LINE L2 3189 3312 -1 24607 141 15 10 chr5 120632184 120637278 -78992872 - L1PA8A LINE L1 -28 6418 1216 186 118 0 0 chr5 120637278 120637312 -78992838 + (TTG)n Simple_repeat Simple_repeat 1 34 0 24607 141 15 10 chr5 120637312 120638533 -78991617 - L1PA8A LINE L1 -5230 1216 3 7695 138 17 17 chr5 120640245 120641371 -78988779 - L1MA2 LINE L1 0 6304 5181 180 0 0 0 chr5 120641371 120641391 -78988759 + (TG)n Simple_repeat Simple_repeat 1 20 0 7695 138 17 17 chr5 120641391 120642821 -78987329 - L1MA2 LINE L1 -1123 5181 3734 552 294 33 0 chr5 120643653 120643806 -78986344 - MIR SINE MIR -45 217 60 1803 160 71 31 chr5 120644057 120644407 -78985743 - THE1B LTR MaLR 0 364 1 246 331 161 0 chr5 120645141 120645265 -78984885 + MIR3 SINE MIR 41 184 -24 2009 188 46 89 chr5 120646313 120646490 -78983660 + L1MA9 LINE L1 5601 5784 -516 433 16 16 32 chr5 120646490 120646553 -78983597 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 226 179 36 0 chr5 120646562 120646618 -78983532 + LTR66 LTR ERVL 394 451 -159 2009 188 46 89 chr5 120646618 120647130 -78983020 + L1MA9 LINE L1 5792 6274 -26 9224 225 110 4 chr5 120647171 120649656 -78980494 + L1PA13 LINE L1 1 2763 -4034 12937 85 4 3 chr5 120699656 120702016 -78928134 + HERV9 LTR ERV1 4615 7053 -1346 2051 153 49 25 chr5 120702169 120702535 -78927615 + THE1C LTR MaLR 1 375 0 9539 135 50 43 chr5 120702535 120702582 -78927568 + THE1C-int LTR MaLR 1 46 -1534 2156 114 0 0 chr5 120702582 120702902 -78927248 + AluSc SINE Alu 1 320 0 9539 135 50 43 chr5 120702902 120704422 -78925728 + THE1C-int LTR MaLR 46 1580 0 2116 169 38 14 chr5 120704422 120704788 -78925362 + THE1C LTR MaLR 1 375 0 663 183 23 0 chr5 120705905 120706036 -78924114 + L1M4 LINE L1 4912 5045 -1101 1402 25 0 0 chr5 120706036 120706193 -78923957 + L1P2 LINE L1 5531 5687 -467 201 158 0 0 chr5 120708074 120708112 -78922038 + A-rich Low_complexity Low_complexity 1 38 0 362 293 45 45 chr5 120709323 120709456 -78920694 + MIR SINE MIR 17 149 -59 237 33 0 0 chr5 120709563 120709593 -78920557 + (CA)n Simple_repeat Simple_repeat 2 31 0 1620 176 7 35 chr5 120709612 120709902 -78920248 - AluJo SINE Alu -26 286 5 26 98 0 0 chr5 120709950 120710032 -78920118 + AT_rich Low_complexity Low_complexity 1 82 0 2340 88 3 0 chr5 120710208 120710504 -78919646 + AluSx SINE Alu 2 298 -14 6175 126 9 14 chr5 120710704 120711860 -78918290 - L1PB1 LINE L1 -1 6866 5715 * 6248 198 64 12 chr5 120711855 120713065 -78917085 - L1PB1 LINE L1 -2566 4296 2981 1788 77 0 0 chr5 120713065 120713287 -78916863 + AluY SINE Alu 86 307 -4 6248 198 64 12 chr5 120713287 120713633 -78916517 - L1PB1 LINE L1 -3881 2981 2655 9611 88 19 15 chr5 120713753 120715305 -78914845 + HERV9 LTR ERV1 504 8399 0 4288 73 196 2 chr5 120715383 120715959 -78914191 + LTR12 LTR ERV1 1 688 0 2440 67 3 7 chr5 120716292 120716590 -78913560 + AluSp SINE Alu 1 297 -16 21 82 0 0 chr5 120716777 120716826 -78913324 + AT_rich Low_complexity Low_complexity 1 49 0 610 300 11 11 chr5 120717134 120717324 -78912826 + MLT1J LTR MaLR 3 192 -319 500 243 10 0 chr5 120717428 120717531 -78912619 + MLT1J LTR MaLR 373 476 -35 25 31 0 0 chr5 120717626 120717658 -78912492 + AT_rich Low_complexity Low_complexity 1 32 0 1117 283 130 102 chr5 120718692 120720234 -78909916 + L2 LINE L2 723 2307 -1007 343 285 293 18 chr5 120720289 120720682 -78909468 + L2 LINE L2 2542 3040 -232 2125 128 0 0 chr5 120720750 120721039 -78909111 - AluSx SINE Alu -19 293 5 511 297 35 39 chr5 120721572 120721804 -78908346 - MIR SINE MIR 0 262 32 775 282 42 17 chr5 120722597 120722838 -78907312 - MIR SINE MIR -3 259 13 460 156 52 21 chr5 120722864 120722960 -78907190 - Tigger5 DNA MER2_type 0 2323 2225 * 1234 202 0 5 chr5 120722956 120723164 -78906986 - Tigger5 DNA MER2_type -2115 208 2 269 319 43 26 chr5 120723293 120723409 -78906741 + L3 LINE CR1 1272 1389 -188 462 260 0 0 chr5 120723421 120723525 -78906625 - MLT1J1 LTR MaLR -272 174 71 471 285 8 8 chr5 120725558 120725688 -78904462 + MLT1H LTR MaLR 5 134 -415 340 241 119 64 chr5 120725714 120725983 -78904167 + MLT1H LTR MaLR 193 548 -1 726 224 92 36 chr5 120726203 120726399 -78903751 + MER58A DNA MER1_type 3 209 -15 22 0 0 0 chr5 120726905 120726927 -78903223 + AT_rich Low_complexity Low_complexity 1 22 0 280 277 132 63 chr5 120727144 120727303 -78902847 + MIR SINE MIR 40 209 -53 268 284 74 0 chr5 120727954 120728035 -78902115 + MIR SINE MIR 59 145 -63 1281 314 75 15 chr5 120728046 120728523 -78901627 + MER115 DNA AcHobo 1 506 -187 313 293 34 25 chr5 120728642 120728776 -78901374 + MLT1I LTR MaLR 281 383 -26 21 0 0 31 chr5 120728829 120728845 -78901305 + AT_rich Low_complexity Low_complexity 1 16 -15 1882 164 3 0 chr5 120728845 120729138 -78901012 + AluSq SINE Alu 1 294 -19 21 0 0 31 chr5 120729138 120729153 -78900997 + AT_rich Low_complexity Low_complexity 16 31 0 9032 188 138 32 chr5 120729601 120730680 -78899470 + L1MCa LINE L1 19 981 -5626 219 36 0 0 chr5 120730680 120730708 -78899442 + (CAA)n Simple_repeat Simple_repeat 2 29 0 9032 188 138 32 chr5 120730708 120731383 -78898767 + L1MCa LINE L1 981 1583 -5024 237 163 0 0 chr5 120731383 120731432 -78898718 + LTR66 LTR ERVL 395 443 -167 9032 188 138 32 chr5 120731432 120732015 -78898135 + L1MCa LINE L1 1583 2691 -3916 1002 209 0 0 chr5 120732038 120732229 -78897921 + L1PBa LINE L1 4 194 -6669 10399 131 123 8 chr5 120732229 120732801 -78897349 + L1PBa LINE L1 903 1408 -5454 207 0 0 0 chr5 120732801 120732824 -78897326 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 10399 131 123 8 chr5 120732824 120734542 -78895608 + L1PBa LINE L1 1408 3458 -3404 31958 42 5 1 chr5 120734557 120739265 -78890885 - L1PA3 LINE L1 0 6857 2142 4601 177 27 29 chr5 120739254 120740371 -78889779 + L1MB3 LINE L1 5061 6180 -3 * 2234 116 0 0 chr5 120740593 120740886 -78889264 + AluSg SINE Alu 1 293 -17 422 238 42 24 chr5 120741760 120741928 -78888222 + L1ME LINE L1 5585 5755 -366 217 290 0 0 chr5 120742052 120742114 -78888036 + (TATG)n Simple_repeat Simple_repeat 2 63 0 1803 189 36 18 chr5 120742198 120742648 -78887502 + pTR5 LTR ERV1 743 1200 -1238 2268 49 4 0 chr5 120742748 120743011 -78887139 + L1PA5 LINE L1 5875 6138 -16 486 33 0 0 chr5 120743014 120743074 -78887076 + (TAA)n Simple_repeat Simple_repeat 2 61 0 3759 159 17 6 chr5 120743074 120743900 -78886250 + L1PA16 LINE L1 5037 5863 -303 599 157 127 0 chr5 120743883 120744017 -78886133 - L1M LINE L1 -897 5408 5258 * 1132 158 22 35 chr5 120744017 120744245 -78885905 - THE1C LTR MaLR 0 375 151 3313 169 7 26 chr5 120744245 120744329 -78885821 + L1PA16 LINE L1 5583 5667 -499 2544 52 0 0 chr5 120744329 120744619 -78885531 + AluY SINE Alu 1 290 -21 3313 169 7 26 chr5 120744619 120745120 -78885030 + L1PA16 LINE L1 5667 6157 -9 13431 163 23 6 chr5 120745146 120747818 -78882332 + L1M1 LINE L1 17 2727 -4838 1134 214 76 31 chr5 120747819 120748108 -78882042 + AluJo SINE Alu 11 312 0 249 108 0 0 chr5 120748110 120748147 -78882003 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 4591 185 48 8 chr5 120748175 120749877 -78880273 + L1M1 LINE L1 2724 4493 -3072 836 103 16 0 chr5 120749877 120750003 -78880147 - MER75B DNA T2_type 0 243 116 29067 42 5 0 chr5 120750006 120754548 -78875602 + L1PA4 LINE L1 1600 6152 -3 636 128 51 8 chr5 120754570 120754687 -78875463 - MER75B DNA T2_type -121 122 1 6279 213 82 5 chr5 120754689 120756576 -78873574 + L1M1 LINE L1 4493 6689 -876 2046 132 19 29 chr5 120756576 120756955 -78873195 + THE1C LTR MaLR 1 375 0 6279 213 82 5 chr5 120756955 120757086 -78873064 + L1M1 LINE L1 6689 6808 -757 3139 194 22 51 chr5 120757087 120758629 -78871521 - L1PA16 LINE L1 -304 5862 4379 3969 221 11 27 chr5 120758637 120759707 -78870443 + L1 LINE L1 3287 4339 -1807 549 233 101 0 chr5 120759844 120759973 -78870177 - MER5A DNA MER1_type -6 183 42 322 259 48 41 chr5 120759850 120759976 -78870174 + MER5A DNA MER1_type 34 163 -26 * 195 42 0 0 chr5 120759976 120760000 -78870150 + (CTG)n Simple_repeat Simple_repeat 1 24 0 322 259 48 41 chr5 120760000 120760020 -78870130 + MER5A DNA MER1_type 163 181 -8 309 329 93 27 chr5 120760490 120760715 -78869435 - L3 LINE CR1 -272 1305 1066 25245 99 5 11 chr5 120760832 120763969 -78866181 - HERV9 LTR ERV1 -3904 4495 1473 2323 110 0 0 chr5 120763969 120764270 -78865880 + AluY SINE Alu 1 301 -10 25245 99 5 11 chr5 120764270 120765735 -78864415 - HERV9 LTR ERV1 -6926 1473 1 3548 89 249 0 chr5 120765735 120766286 -78863864 - LTR12 LTR ERV1 0 688 1 817 234 72 47 chr5 120766365 120766643 -78863507 - pTR5 LTR ERV1 -1410 1028 744 269 288 62 12 chr5 120767815 120767895 -78862255 + L2 LINE L2 3112 3195 -77 321 236 0 14 chr5 120768419 120768491 -78861659 + Tigger5 DNA MER2_type 8 78 -2245 394 210 12 0 chr5 120768564 120768645 -78861505 + Tigger5 DNA MER2_type 2242 2323 0 28 0 0 0 chr5 120768902 120768930 -78861220 + AT_rich Low_complexity Low_complexity 1 28 0 1733 184 33 0 chr5 120769182 120769481 -78860669 - AluJb SINE Alu -3 309 1 1706 265 95 20 chr5 120769527 120770221 -78859929 - L1ME LINE L1 -5318 752 7 381 248 113 23 chr5 120771515 120771648 -78858502 - MIR3 SINE MIR -26 182 38 22 35 0 0 chr5 120771770 120771799 -78858351 + AT_rich Low_complexity Low_complexity 1 29 0 314 223 43 21 chr5 120771856 120771950 -78858200 - MLT1L LTR MaLR -342 273 178 352 296 81 26 chr5 120772139 120772407 -78857743 - L1MDa LINE L1 -3964 2576 2411 290 265 85 13 chr5 120772769 120772953 -78857197 - MLT1J2 LTR MaLR 0 450 267 409 194 144 94 chr5 120773032 120773192 -78856958 - MLT1B LTR MaLR -222 168 1 257 311 48 44 chr5 120773303 120773509 -78856641 + MLT1K LTR MaLR 325 531 -57 280 278 92 23 chr5 120773677 120773850 -78856300 - MLT1L LTR MaLR -1 614 430 226 276 0 0 chr5 120773945 120774003 -78856147 - MLT1K LTR MaLR -363 225 168 270 236 14 14 chr5 120774126 120774198 -78855952 - MLT1L LTR MaLR -543 72 1 758 193 29 0 chr5 120775207 120775378 -78854772 + MER53 DNA DNA 1 176 -13 518 239 90 55 chr5 120775506 120776014 -78854136 + MLT1F LTR MaLR 37 542 0 2171 128 0 0 chr5 120776184 120776480 -78853670 - AluSx SINE Alu -16 296 1 364 307 50 0 chr5 120776564 120776665 -78853485 + MIR SINE MIR 41 146 -62 377 271 146 7 chr5 120776679 120776830 -78853320 - MER117 DNA MER1_type -1 196 25 3758 155 42 19 chr5 120777571 120778569 -78851581 - L1MA9 LINE L1 -243 6069 5047 1712 205 38 26 chr5 120778717 120779108 -78851042 + MSTD LTR MaLR 1 396 0 411 178 0 0 chr5 120779262 120779335 -78850815 + Tigger5 DNA MER2_type 2251 2323 0 309 233 14 0 chr5 120779477 120779550 -78850600 + Tigger5 DNA MER2_type 2241 2314 -9 282 95 0 0 chr5 120779553 120779595 -78850555 + (CA)n Simple_repeat Simple_repeat 2 43 0 1237 318 134 37 chr5 120779603 120780800 -78849350 + L1MC4a LINE L1 2706 4018 -2128 1835 47 0 8 chr5 120781227 120781489 -78848661 - L1PA2 LINE L1 0 6155 5924 2296 193 96 96 chr5 120781644 120781953 -78848197 + L1MC3 LINE L1 6872 7180 -605 1649 123 0 5 chr5 120781953 120782173 -78847977 - AluSq SINE Alu -94 219 1 2296 193 96 96 chr5 120782173 120782763 -78847387 + L1MC3 LINE L1 7179 7771 -14 5626 133 30 16 chr5 120782917 120784096 -78846054 - L1MA6 LINE L1 0 6300 5111 549 320 80 55 chr5 120784300 120784847 -78845303 + HAL1b LINE L1 60 435 -913 2341 83 7 0 chr5 120784942 120785242 -78844908 - AluSc SINE Alu -7 302 1 343 305 54 38 chr5 120785413 120785652 -78844498 + L1MC4a LINE L1 4294 4536 -1610 2205 116 0 6 chr5 120785685 120785996 -78844154 - AluSc SINE Alu 0 309 1 337 309 72 16 chr5 120786304 120786667 -78843483 + L1MC4a LINE L1 4860 5242 -904 1050 229 30 28 chr5 120786680 120787043 -78843107 + L1MC4a LINE L1 5255 5618 -2190 22 0 0 0 chr5 120787051 120787073 -78843077 + AT_rich Low_complexity Low_complexity 1 22 0 528 136 0 85 chr5 120787162 120787280 -78842870 + MER50 LTR ERV1 497 604 -130 398 261 26 13 chr5 120787281 120787434 -78842716 - L1MA9 LINE L1 -119 6193 6039 539 223 0 0 chr5 120787519 120787622 -78842528 - FLAM_A SINE Alu -18 124 22 7702 205 62 9 chr5 120787647 120790332 -78839818 - L1MA9 LINE L1 -280 6032 3197 2364 98 0 0 chr5 120790332 120790628 -78839522 + AluSg SINE Alu 1 296 -14 2305 124 25 6 chr5 120790666 120791021 -78839129 - THE1B LTR MaLR -2 362 1 5276 212 24 6 chr5 120791032 120792299 -78837851 + L1P LINE L1 4108 5397 -749 369 0 0 0 chr5 120792304 120792345 -78837805 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1989 116 3 11 chr5 120792348 120792632 -78837518 - AluSx SINE Alu -30 282 1 609 236 34 0 chr5 120792633 120792811 -78837339 - L1MA9 LINE L1 -3213 2933 2750 279 213 33 0 chr5 120792821 120792882 -78837268 + L1MC4a LINE L1 5595 5657 -464 2179 150 19 8 chr5 120792887 120793246 -78836904 + THE1B LTR MaLR 2 364 0 10327 122 33 0 chr5 120793246 120794775 -78835375 + THE1B-int LTR MaLR 1 1580 0 2003 103 26 16 chr5 120794775 120795087 -78835063 + THE1B LTR MaLR 1 315 -49 753 232 240 16 chr5 120795100 120795484 -78834666 + L1MC4a LINE L1 5683 6152 -1656 315 0 0 0 chr5 120795495 120795530 -78834620 + (TA)n Simple_repeat Simple_repeat 2 36 0 311 370 15 15 chr5 120795603 120795738 -78834412 + L1M4 LINE L1 4054 4188 -1958 1370 306 187 42 chr5 120795891 120797354 -78832796 - L2 LINE L2 -1448 1866 192 247 111 0 0 chr5 120798239 120798275 -78831875 - MLT1E2 LTR MaLR -439 187 152 1285 192 40 147 chr5 120799495 120799763 -78830387 - MLT1D LTR MaLR -8 497 202 2340 105 74 6 chr5 120799763 120800114 -78830036 - THE1C LTR MaLR 0 375 1 10290 108 30 40 chr5 120800116 120801709 -78828441 - THE1C-int LTR MaLR -2 1578 3 2246 109 75 11 chr5 120801711 120802059 -78828091 - THE1C LTR MaLR -2 373 4 1285 192 40 147 chr5 120802059 120802341 -78827809 - MLT1D LTR MaLR -305 200 1 300 129 14 43 chr5 120802978 120803048 -78827102 + THE1A LTR MaLR 6 73 -291 1308 179 16 0 chr5 120803150 120803402 -78826748 + THE1A LTR MaLR 100 355 0 1724 171 78 0 chr5 120803539 120803861 -78826289 + MER7A DNA MER2_type 1 345 -1 1957 84 0 8 chr5 120805209 120805459 -78824691 - AluY SINE Alu -63 248 1 616 280 140 14 chr5 120805706 120805913 -78824237 - MIR SINE MIR -10 252 20 192 296 16 122 chr5 120808159 120808348 -78821802 - L2 LINE L2 -109 3163 2995 220 275 66 22 chr5 120808360 120808451 -78821699 - L2 LINE L2 0 3313 3219 423 300 42 16 chr5 120810070 120810260 -78819890 - L1MEc LINE L1 -4638 1758 1564 3285 107 16 0 chr5 120810264 120810761 -78819389 + L1PA15 LINE L1 5628 6132 -33 228 168 25 42 chr5 120810763 120810779 -78819371 + (TA)n Simple_repeat Simple_repeat 1 16 -101 2112 110 0 10 chr5 120810779 120811071 -78819079 + AluSg1 SINE Alu 1 289 -20 228 168 25 42 chr5 120811071 120811173 -78818977 + (TA)n Simple_repeat Simple_repeat 16 117 0 231 202 8 73 chr5 120811187 120811311 -78818839 + (TA)n Simple_repeat Simple_repeat 1 116 0 270 133 0 40 chr5 120811323 120811398 -78818752 + (TA)n Simple_repeat Simple_repeat 1 72 0 272 200 31 15 chr5 120811573 120811638 -78818512 + MIR3 SINE MIR 132 197 -11 228 246 16 0 chr5 120811974 120812035 -78818115 - L1MEc LINE L1 -4830 1566 1505 1536 183 53 20 chr5 120812088 120812388 -78817762 - AluJb SINE Alu -2 310 1 247 83 0 21 chr5 120812436 120812484 -78817666 - L1M4 LINE L1 -419 5755 5709 1380 152 15 8 chr5 120812587 120812851 -78817299 - L1MB3 LINE L1 0 6183 5918 269 77 0 0 chr5 120812851 120812890 -78817260 + L1MB3 LINE L1 5869 5907 -273 257 340 56 87 chr5 120813094 120813520 -78816630 + L2 LINE L2 2858 3270 -2 741 104 9 0 chr5 120813735 120813850 -78816300 - L1M2 LINE L1 -487 5813 5698 * 2562 152 20 9 chr5 120813827 120814525 -78815625 + L1M2 LINE L1 5026 5725 -575 186 355 101 26 chr5 120814777 120814966 -78815184 + L3b LINE CR1 1300 1502 -81 1593 178 85 25 chr5 120815129 120815483 -78814667 - THE1C LTR MaLR 0 375 1 8409 141 31 58 chr5 120815483 120817106 -78813044 - THE1C-int LTR MaLR 0 1580 3 1587 168 99 34 chr5 120817108 120817460 -78812690 - THE1C LTR MaLR 0 375 1 389 309 143 84 chr5 120817718 120817952 -78812198 + L2 LINE L2 1616 1835 -1479 195 42 0 0 chr5 120817952 120817976 -78812174 + (TTCTC)n Simple_repeat Simple_repeat 5 28 0 389 309 143 84 chr5 120817976 120818084 -78812066 + L2 LINE L2 1835 1935 -1379 670 197 33 6 chr5 120818084 120818267 -78811883 - L1MB4 LINE L1 0 6180 5993 389 309 143 84 chr5 120818267 120818448 -78811702 + L2 LINE L2 1935 2171 -1143 26 0 0 0 chr5 120818448 120818474 -78811676 + AT_rich Low_complexity Low_complexity 1 26 0 195 373 118 7 chr5 120818588 120818741 -78811409 + L2 LINE L2 2891 3060 -212 261 248 200 57 chr5 120818759 120818864 -78811286 + L2 LINE L2 3180 3299 -14 708 274 19 14 chr5 120819952 120820160 -78809990 - MIR SINE MIR 0 262 54 2166 108 37 0 chr5 120821875 120822172 -78807978 + AluSg SINE Alu 1 308 -2 619 112 0 2 chr5 120822491 120822587 -78807563 + L1PA16 LINE L1 5877 5970 -185 1176 121 22 0 chr5 120822640 120822822 -78807328 + L1PA16 LINE L1 5972 6157 -9 189 107 0 0 chr5 120823646 120823674 -78806476 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 232 324 0 0 chr5 120823674 120823742 -78806408 - L2 LINE L2 0 3313 3246 26 50 0 0 chr5 120825028 120825068 -78805082 + AT_rich Low_complexity Low_complexity 1 40 0 4626 114 18 49 chr5 120825164 120825982 -78804168 - pTR5 LTR ERV1 0 2438 1646 649 290 28 35 chr5 120826470 120826753 -78803397 - LTR16A LTR ERVL -109 341 61 1534 198 122 6 chr5 120827138 120827439 -78802711 + MLT2C1 LTR ERVL 1 350 -47 464 81 14 0 chr5 120827439 120827513 -78802637 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 1534 198 122 6 chr5 120827513 120827565 -78802585 + MLT2C1 LTR ERVL 350 395 -2 433 312 139 17 chr5 120827636 120827809 -78802341 - MIR3 SINE MIR -6 202 9 183 326 0 0 chr5 120828123 120828172 -78801978 + L2 LINE L2 3193 3241 -31 29068 111 11 63 chr5 120828230 120834720 -78795430 - L1PA7 LINE L1 -1 6153 12 272 333 63 18 chr5 120835791 120835902 -78794248 + MIR SINE MIR 30 145 -63 317 349 27 13 chr5 120835984 120836133 -78794017 + L3 LINE CR1 1424 1574 -3 743 300 141 24 chr5 120836243 120836893 -78793257 + L2 LINE L2 2578 3304 -9 1020 261 171 46 chr5 120836897 120837730 -78792420 - L2 LINE L2 -1 3312 2361 20680 189 29 17 chr5 120837750 120844193 -78785957 - L1PA11 LINE L1 0 7612 9 1445 272 31 0 chr5 120844357 120844773 -78785377 + L1PBa LINE L1 125 553 -6310 2395 165 79 1 chr5 120844814 120845604 -78784546 + L1PBa LINE L1 627 1622 -5241 4962 188 53 20 chr5 120946300 120947397 -78682753 + L1MC2 LINE L1 5200 6336 -8 1056 212 75 114 chr5 120947425 120947996 -78682154 - L1MC4a LINE L1 -79 7729 7181 19661 31 2 2 chr5 120948134 120950546 -78679604 - L1P LINE L1 -914 5232 2821 333 87 10 144 chr5 120950646 120950841 -78679309 + L1PA2 LINE L1 5020 5188 -958 6227 39 2 30 chr5 120950981 120951861 -78678289 + L1PA2 LINE L1 5300 6155 0 4339 87 7 0 chr5 120951888 120952852 -78677298 - L1PA6 LINE L1 -307 5847 4880 627 134 17 17 chr5 120952847 120952966 -78677184 - L1PA6 LINE L1 -3364 2782 2664 * 564 329 72 31 chr5 120953631 120954087 -78676063 + L1MC4a LINE L1 2453 2927 -3219 229 254 17 0 chr5 120954092 120954151 -78675999 + L1P LINE L1 2956 3015 -3131 33 25 0 0 chr5 120954152 120954192 -78675958 + AT_rich Low_complexity Low_complexity 1 40 0 348 301 35 83 chr5 120954234 120954546 -78675604 + L1MC4a LINE L1 4943 5239 -907 1507 258 40 24 chr5 120954554 120955128 -78675022 + L1MC4a LINE L1 5254 5836 -1972 453 233 17 43 chr5 120955584 120955700 -78674450 - L2 LINE L2 -8 3305 3193 1861 177 10 65 chr5 120955779 120956192 -78673958 - MLT1B LTR MaLR 0 390 1 8136 38 13 8 chr5 120956281 120957349 -78672801 + L1P LINE L1 2042 3114 -3032 982 122 134 0 chr5 120957450 120957622 -78672528 + MSTB1 LTR MaLR 238 432 0 1804 230 35 71 chr5 120957637 120958212 -78671938 - MLT2B3 LTR ERVL 0 554 1 248 282 74 54 chr5 120958536 120958685 -78671465 - L2 LINE L2 -78 3235 3084 239 397 43 5 chr5 120958746 120958955 -78671195 - LTR67 LTR ERVL -7 550 334 1253 89 11 0 chr5 120959005 120959184 -78670966 - L1P LINE L1 -4369 1777 1597 * 5884 105 2 9 chr5 120959175 120960074 -78670076 + L1P LINE L1 1786 2678 -3468 305 291 70 54 chr5 120962145 120962403 -78667747 + HAL1 LINE L1 9 270 -2237 723 157 0 8 chr5 120962450 120962584 -78667566 + L1MA7 LINE L1 6152 6284 -7 24 0 0 0 chr5 120962584 120962608 -78667542 + AT_rich Low_complexity Low_complexity 1 24 0 191 263 38 25 chr5 120964370 120964450 -78665700 - L2 LINE L2 -1106 2208 2128 2049 153 3 12 chr5 120965412 120965758 -78664392 + MER2 DNA MER2_type 1 343 -1 235 321 0 12 chr5 120965761 120965845 -78664305 + MIR SINE MIR 32 114 -148 418 336 23 16 chr5 120966089 120966217 -78663933 - L2 LINE L2 0 3272 3144 671 325 150 16 chr5 120966391 120966844 -78663306 - L2 LINE L2 -371 2943 2430 431 288 117 66 chr5 120967644 120968322 -78661828 - L2 LINE L2 -905 2409 1698 21 0 0 0 chr5 120968486 120968507 -78661643 + AT_rich Low_complexity Low_complexity 1 21 0 300 255 0 0 chr5 120969320 120969422 -78660728 + T-rich Low_complexity Low_complexity 1 102 0 205 260 10 58 chr5 120969467 120969571 -78660579 + CT-rich Low_complexity Low_complexity 3 101 0 204 338 14 50 chr5 120969768 120969907 -78660243 + MIR SINE MIR 59 192 -70 516 296 128 1 chr5 120969910 120970106 -78660044 + MIR SINE MIR 19 243 -19 25 0 0 0 chr5 120971381 120971406 -78658744 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 120972011 120972035 -78658115 + AT_rich Low_complexity Low_complexity 1 24 0 197 270 183 24 chr5 120973025 120973151 -78656999 + MIR SINE MIR 65 210 -52 1910 120 8 0 chr5 120973690 120973956 -78656194 + AluSg SINE Alu 43 310 0 1057 268 89 61 chr5 120974185 120974611 -78655539 - L2 LINE L2 -14 3299 2862 1039 267 20 62 chr5 120974640 120974992 -78655158 - L2 LINE L2 -357 2957 2621 258 163 0 0 chr5 120975008 120975057 -78655093 + L2 LINE L2 2196 2244 -1070 365 229 0 0 chr5 120975063 120975133 -78655017 - Tigger5 DNA MER2_type -4 2319 2250 293 211 0 0 chr5 120975104 120975156 -78654994 - Tigger5 DNA MER2_type -2271 52 1 * 1427 274 137 11 chr5 120975197 120975722 -78654428 + L2 LINE L2 2306 2896 -418 569 245 135 36 chr5 120975816 120976008 -78654142 - MIR SINE MIR 0 262 52 545 250 75 40 chr5 120980549 120980801 -78649349 + L1M4 LINE L1 2 262 -6280 1156 248 56 13 chr5 120980859 120981425 -78648725 + L1M4 LINE L1 1818 2498 -4148 742 128 17 17 chr5 120981439 120981580 -78648570 + AluSp/q SINE Alu 170 310 0 588 190 172 23 chr5 120981580 120981886 -78648264 + L1M4 LINE L1 2510 2866 -3778 432 263 70 47 chr5 120982316 120982487 -78647663 - MIR3 SINE MIR -31 177 3 296 348 107 24 chr5 120982772 120983025 -78647125 + L2 LINE L2 2228 2501 -813 255 208 255 28 chr5 120983036 120983142 -78647008 + MIR SINE MIR 20 149 -113 183 353 24 24 chr5 120983625 120983710 -78646440 - L2 LINE L2 -2 3311 3227 429 239 22 65 chr5 120983879 120984017 -78646133 - MIR SINE MIR 0 262 131 21 82 0 0 chr5 120984027 120984076 -78646074 + AT_rich Low_complexity Low_complexity 1 49 0 382 216 0 14 chr5 120984539 120984613 -78645537 - MIR SINE MIR -183 79 7 367 386 51 0 chr5 120984645 120984821 -78645329 - L2 LINE L2 -2405 909 725 2908 192 94 10 chr5 120985047 120985718 -78644432 - LTR8A LTR ERV1 0 727 1 2294 199 44 26 chr5 120986719 120987351 -78642799 - LTR27 LTR ERV1 -134 502 3 14281 151 46 52 chr5 120987352 120989856 -78640294 - LTR27-int LTR ERV1 -1 6995 4478 1954 141 0 10 chr5 120989856 120990146 -78640004 - AluSx SINE Alu -25 287 1 14281 151 46 52 chr5 120990146 120992018 -78638132 - LTR27-int LTR ERV1 -2518 4478 632 385 173 27 13 chr5 120992044 120992119 -78638031 - LTR27-int LTR ERV1 -886 3994 3919 509 133 0 39 chr5 120992131 120992240 -78637910 - LTR27-int LTR ERV1 -454 4763 2174 4576 182 80 52 chr5 120992245 120993268 -78636882 - LTR27-int LTR ERV1 -5634 1457 406 877 216 12 0 chr5 120993274 120993441 -78636709 + AluSg/x SINE Alu 135 303 -7 698 120 0 8 chr5 120993475 120993592 -78636558 + (GGAA)n Simple_repeat Simple_repeat 4 119 0 511 230 164 49 chr5 120993595 120993821 -78636329 - LTR27-int LTR ERV1 -6839 252 1 2324 213 37 20 chr5 120993826 120994490 -78635660 - LTR27 LTR ERV1 -2 634 11 36 23 0 0 chr5 120995572 120995615 -78634535 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr5 120996002 120996030 -78634120 + AT_rich Low_complexity Low_complexity 1 28 0 204 333 115 18 chr5 120996316 120996481 -78633669 + L2 LINE L2 1915 2095 -1219 24 0 0 0 chr5 120999814 120999838 -78630312 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr5 121000247 121000282 -78629868 + AT_rich Low_complexity Low_complexity 1 35 0 477 259 83 96 chr5 121000297 121000610 -78629540 - L1MD2 LINE L1 -124 6733 6425 * 1326 249 68 14 chr5 121000604 121001118 -78629032 - L1MD2 LINE L1 -744 5900 5359 993 183 0 6 chr5 121001118 121001293 -78628857 + AluJb SINE Alu 122 295 -17 987 255 30 38 chr5 121001318 121001802 -78628348 - L1MD2 LINE L1 -3668 2976 2499 1344 306 72 18 chr5 121002051 121002548 -78627602 + L1M4b LINE L1 391 914 -5945 * 2732 195 35 26 chr5 121002542 121003293 -78626857 - L1MD2 LINE L1 -4292 2354 1521 5426 136 25 11 chr5 121003313 121004246 -78625904 - L1PA16 LINE L1 -1 6165 5219 637 300 144 63 chr5 121004238 121005188 -78624962 - L1MD2 LINE L1 -5448 1094 68 * 459 315 60 47 chr5 121005223 121005755 -78624395 - L1MEc LINE L1 -3594 2621 2125 384 256 8 48 chr5 121006322 121006447 -78623703 + L2 LINE L2 3127 3246 -67 227 218 0 0 chr5 121007163 121007218 -78622932 + L1MC4 LINE L1 6648 6702 -1340 * 234 200 0 0 chr5 121007184 121007229 -78622921 - L1MC4 LINE L1 -1340 6702 6658 225 292 131 29 chr5 121007591 121007633 -78622517 - MLT1K LTR MaLR -19 569 533 360 0 0 0 chr5 121007633 121007673 -78622477 + (TAA)n Simple_repeat Simple_repeat 1 40 0 225 292 131 29 chr5 121007673 121007767 -78622383 - MLT1K LTR MaLR -55 533 419 230 245 0 0 chr5 121007769 121007822 -78622328 + (CA)n Simple_repeat Simple_repeat 2 54 0 244 325 0 12 chr5 121008030 121008113 -78622037 - MLT1K LTR MaLR -467 121 40 202 231 0 15 chr5 121008828 121008893 -78621257 + (TA)n Simple_repeat Simple_repeat 2 65 0 492 361 70 0 chr5 121009629 121009859 -78620291 - MIR SINE MIR 0 262 17 22 35 0 0 chr5 121010479 121010508 -78619642 + AT_rich Low_complexity Low_complexity 1 29 0 201 383 18 30 chr5 121010653 121010805 -78619345 + MIR3 SINE MIR 3 154 -54 2458 77 0 0 chr5 121010805 121011105 -78619045 - AluY SINE Alu -10 301 2 201 383 18 30 chr5 121011105 121011119 -78619031 + MIR3 SINE MIR 154 167 -41 1235 263 52 36 chr5 121011284 121011668 -78618482 - MLT1F1 LTR MaLR -1 566 177 10436 181 67 47 chr5 121011767 121014505 -78615645 + L1PA15-16 LINE L1 847 3665 -3184 2101 163 74 17 chr5 121014505 121014837 -78615313 - MSTA LTR MaLR 0 428 67 2418 120 3 38 chr5 121014837 121015228 -78614922 - MER51B LTR ERV1 0 377 1 2101 163 74 17 chr5 121015228 121015300 -78614850 - MSTA LTR MaLR -361 67 1 9430 225 25 19 chr5 121015300 121015508 -78614642 + L1PA15-16 LINE L1 3661 3866 -2983 2346 127 8 22 chr5 121015508 121015877 -78614273 + THE1B LTR MaLR 1 364 0 9430 225 25 19 chr5 121015877 121018090 -78612060 + L1PA15-16 LINE L1 3866 6098 -751 3191 202 123 8 chr5 121018091 121018893 -78611257 + L1PBa LINE L1 261 1155 -5708 8636 184 29 23 chr5 121018903 121022293 -78607857 + L1PBa LINE L1 1308 4714 -2148 420 291 35 29 chr5 121022910 121023082 -78607068 + MER20B DNA MER1_type 2 174 -609 189 0 0 0 chr5 121023216 121023237 -78606913 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 459 0 0 0 chr5 121023236 121023287 -78606863 + (TA)n Simple_repeat Simple_repeat 2 52 0 1894 196 48 90 chr5 121023824 121024390 -78605760 - MLT1F LTR MaLR 0 542 1 1514 235 0 3 chr5 121024478 121024844 -78605306 - L1M4 LINE L1 -2362 3784 3420 418 308 65 76 chr5 121025814 121026197 -78603953 + L2 LINE L2 2136 2514 -800 184 340 0 0 chr5 121026391 121026444 -78603706 - L2 LINE L2 0 3313 3261 294 282 58 19 chr5 121026789 121026945 -78603205 + MER103 DNA DNA 3 164 -2 288 0 0 0 chr5 121027707 121027739 -78602411 + (CA)n Simple_repeat Simple_repeat 1 32 0 26 0 0 0 chr5 121027791 121027817 -78602333 + AT_rich Low_complexity Low_complexity 1 26 0 2271 92 3 0 chr5 121028930 121029222 -78600928 + AluSg SINE Alu 1 293 -17 251 217 43 0 chr5 121029815 121029907 -78600243 + (TA)n Simple_repeat Simple_repeat 2 97 0 24 32 0 0 chr5 121030083 121030114 -78600036 + AT_rich Low_complexity Low_complexity 1 31 0 22 70 0 0 chr5 121030286 121030329 -78599821 + AT_rich Low_complexity Low_complexity 1 43 0 2352 103 0 0 chr5 121030474 121030786 -78599364 - AluSq SINE Alu -1 312 1 2657 99 3 0 chr5 121032077 121032431 -78597719 - THE1A LTR MaLR 0 355 1 11195 104 19 0 chr5 121032431 121033981 -78596169 - THE1A-int LTR MaLR 0 1580 1 2727 82 3 0 chr5 121033981 121034335 -78595815 - THE1A LTR MaLR 0 355 1 5685 106 16 25 chr5 121034472 121035440 -78594710 + L1PA13 LINE L1 5190 6148 -15 814 142 31 0 chr5 121036506 121036633 -78593517 + FLAM_C SINE Alu 1 131 -12 290 250 29 0 chr5 121036647 121036715 -78593435 + L2 LINE L2 3240 3309 -4 1896 234 83 39 chr5 121037173 121037690 -78592460 + MLT1F1 LTR MaLR 28 567 0 993 268 166 31 chr5 121038285 121038851 -78591299 + L2 LINE L2 2660 3313 0 29 28 0 0 chr5 121038861 121038897 -78591253 + AT_rich Low_complexity Low_complexity 1 36 0 280 254 53 44 chr5 121039014 121039128 -78591022 - L1ME LINE L1 -497 5624 5510 370 107 36 60 chr5 121039531 121039615 -78590535 + L1MA2 LINE L1 6223 6304 0 315 221 158 11 chr5 121041416 121041511 -78588639 + MIR SINE MIR 45 153 -109 2550 37 0 3 chr5 121042270 121042568 -78587582 + AluY SINE Alu 1 297 -14 779 313 57 6 chr5 121043207 121043523 -78586627 + MER102b DNA MER1_type 1 332 -9 25 0 0 0 chr5 121043543 121043568 -78586582 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 121043847 121043868 -78586282 + AT_rich Low_complexity Low_complexity 1 21 0 4333 220 100 17 chr5 121045496 121046729 -78583421 - Charlie1 DNA MER1_type -5 2756 1422 476 229 9 9 chr5 121046723 121046832 -78583318 - Charlie1 DNA MER1_type -2640 121 13 * 2490 64 0 0 chr5 121046853 121047150 -78583000 - AluY SINE Alu -11 300 4 21 57 0 0 chr5 121047394 121047429 -78582721 + AT_rich Low_complexity Low_complexity 1 35 0 730 285 107 4 chr5 121048667 121048930 -78581220 + L1MC4a LINE L1 5576 5865 -1943 196 360 59 42 chr5 121049235 121049524 -78580626 - L2 LINE L2 -739 2575 2282 769 142 13 77 chr5 121049913 121050068 -78580082 - L1PA16 LINE L1 -21 6145 6001 25 31 0 0 chr5 121050069 121050101 -78580049 + AT_rich Low_complexity Low_complexity 1 32 0 29 0 0 0 chr5 121050148 121050177 -78579973 + AT_rich Low_complexity Low_complexity 1 29 0 202 346 103 29 chr5 121050239 121050375 -78579775 - L2 LINE L2 -32 3240 3095 268 322 125 27 chr5 121050599 121050894 -78579256 - L2 LINE L2 -686 2628 2305 1109 155 87 43 chr5 121051149 121051426 -78578724 - MSTB1 LTR MaLR -143 289 1 182 376 28 18 chr5 121051537 121051646 -78578504 + MIR SINE MIR 20 129 -133 24 54 0 18 chr5 121051645 121051668 -78578482 + AT_rich Low_complexity Low_complexity 1 23 -32 * 7620 29 6 0 chr5 121051668 121053075 -78577075 - L1PA4 LINE L1 -3 6152 4742 24 54 0 18 chr5 121053075 121053107 -78577043 + AT_rich Low_complexity Low_complexity 23 55 0 434 291 52 52 chr5 121055199 121055467 -78574683 + L1ME3A LINE L1 5417 5684 -2124 206 105 26 0 chr5 121055679 121055717 -78574433 + (TA)n Simple_repeat Simple_repeat 1 39 0 2992 160 9 15 chr5 121056137 121056661 -78573489 - Tigger3(Golem) DNA MER2_type 0 3029 2509 6605 66 12 0 chr5 121056661 121057412 -78572738 - L1PA7 LINE L1 -5 6149 5409 2302 82 3 3 chr5 121057412 121057703 -78572447 - AluY SINE Alu -18 293 3 6605 66 12 0 chr5 121057703 121058589 -78571561 - L1PA7 LINE L1 -745 5409 4504 5306 83 6 0 chr5 121058589 121059314 -78570836 + L1PA7 LINE L1 3765 4493 -1653 1085 91 71 5 chr5 121059314 121059512 -78570638 - Tigger3(Golem) DNA MER2_type -509 2520 2310 2073 157 17 0 chr5 121059987 121060344 -78569806 - L1PA16 LINE L1 0 6166 5804 197 309 0 0 chr5 121160495 121160537 -78469613 + L2 LINE L2 3213 3254 -18 1388 183 127 87 chr5 121160984 121161433 -78468717 - MLT1C LTR MaLR 0 467 1 2279 114 0 3 chr5 121161615 121161922 -78468228 + AluSq SINE Alu 5 310 -3 777 238 73 47 chr5 121162622 121162894 -78467256 + L1ME LINE L1 5304 5617 -553 3336 81 20 20 chr5 121162894 121163338 -78466812 + MLT2A1 LTR ERVL 1 444 0 777 238 73 47 chr5 121163338 121163397 -78466753 + L1ME LINE L1 5617 5673 -497 1151 131 0 6 chr5 121163470 121163646 -78466504 + AluSp SINE Alu 138 312 -1 240 163 143 0 chr5 121163721 121163770 -78466380 + L1ME3A LINE L1 6027 6082 -88 1813 136 42 3 chr5 121164114 121164401 -78465749 + AluSx SINE Alu 1 298 -14 452 251 181 30 chr5 121164411 121164610 -78465540 - MIR SINE MIR -6 256 28 4133 147 23 40 chr5 121164925 121165667 -78464483 + L1PB2 LINE L1 5420 6148 -3 437 284 65 35 chr5 121165692 121165893 -78464257 - L2 LINE L2 -938 2376 2170 1948 170 3 6 chr5 121166896 121167208 -78462942 + AluJb SINE Alu 1 311 -1 4414 158 43 1 chr5 121167665 121168368 -78461782 + MER44D DNA MER2_type 2 605 0 532 269 154 5 chr5 121168809 121169017 -78461133 + MIR SINE MIR 11 249 -13 819 204 41 35 chr5 121169046 121169218 -78460932 + FAM SINE Alu 2 174 -1 2250 90 3 0 chr5 121169603 121169893 -78460257 + AluSp SINE Alu 1 291 -22 456 208 185 23 chr5 121169990 121170120 -78460030 + MER5A DNA MER1_type 39 189 0 795 202 0 0 chr5 121170532 121170656 -78459494 - FLAM_A SINE Alu -9 124 1 262 296 80 0 chr5 121170778 121170866 -78459284 - MIR SINE MIR -119 143 49 252 200 183 0 chr5 121170913 121170973 -78459177 + MER44D DNA MER2_type 631 573 -32 278 196 33 98 chr5 121171064 121171156 -78458994 - MER103 DNA DNA -78 88 3 2351 100 0 0 chr5 121171236 121171535 -78458615 - AluSx SINE Alu -13 299 1 525 188 45 9 chr5 121171838 121171950 -78458200 - LTR24B LTR ERV1 -7 569 454 240 276 178 20 chr5 121172087 121172239 -78457911 - LTR24B LTR ERV1 -239 337 162 1761 33 47 0 chr5 121172245 121172457 -78457693 + LTR17 LTR ERV1 104 325 -455 285 29 0 0 chr5 121172457 121172491 -78457659 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 5559 132 40 2 chr5 121172491 121173949 -78456201 + L1PA16 LINE L1 4649 6156 -10 353 299 78 53 chr5 121174451 121174884 -78455266 + LTR33 LTR ERVL 23 513 -8 349 301 42 35 chr5 121174963 121175106 -78455044 + L2 LINE L2 3169 3312 -1 40529 73 11 3 chr5 121175672 121181783 -78448367 + L1PA5 LINE L1 3 6163 0 45 19 0 0 chr5 121182865 121182917 -78447233 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr5 121183130 121183152 -78446998 + AT_rich Low_complexity Low_complexity 1 22 0 4922 160 84 38 chr5 121185556 121185648 -78444502 + Tigger3b DNA MER2_type 1 87 -2941 1868 165 0 0 chr5 121185648 121185933 -78444217 + AluSx SINE Alu 5 289 -23 180 0 0 0 chr5 121185936 121185956 -78444194 + (TTCA)n Simple_repeat Simple_repeat 2 21 0 4922 160 84 38 chr5 121185956 121186463 -78443687 + Tigger3b DNA MER2_type 88 570 -2458 2213 94 31 0 chr5 121186463 121186751 -78443399 + AluSp SINE Alu 1 297 -16 4922 160 84 38 chr5 121186751 121186837 -78443313 + Tigger3b DNA MER2_type 570 651 -2377 2971 9 0 0 chr5 121186837 121187155 -78442995 + AluYb8 SINE Alu 1 318 0 4922 160 84 38 chr5 121187155 121187592 -78442558 + Tigger3b DNA MER2_type 651 1181 -50 2479 143 38 60 chr5 121187695 121187974 -78442176 - HUERS-P3 LTR ERV1 -1317 7602 7335 2256 114 0 0 chr5 121187974 121188271 -78441879 + AluSq SINE Alu 1 297 -16 2479 143 38 60 chr5 121188271 121188438 -78441712 - HUERS-P3 LTR ERV1 -1584 7335 7166 * 41474 143 13 7 chr5 121188412 121194997 -78435153 - HUERS-P3 LTR ERV1 -2094 6825 122 2028 139 3 23 chr5 121194997 121195300 -78434850 - AluSx SINE Alu -15 297 1 41474 143 13 7 chr5 121195300 121195420 -78434730 - HUERS-P3 LTR ERV1 -8797 122 4 295 313 14 48 chr5 121195595 121195803 -78434347 + ERVL LTR ERVL 3792 3992 -1772 438 363 62 5 chr5 121195846 121196039 -78434111 + ERVL LTR ERVL 4082 4285 -1479 1860 151 28 7 chr5 121196039 121196324 -78433826 + AluJo SINE Alu 1 291 -21 28 0 0 0 chr5 121196326 121196354 -78433796 + AT_rich Low_complexity Low_complexity 1 28 0 1146 183 107 32 chr5 121196364 121196616 -78433534 + AluJb SINE Alu 4 274 -38 632 57 23 0 chr5 121196624 121196712 -78433438 + (GGGA)n Simple_repeat Simple_repeat 4 93 0 1101 347 54 45 chr5 121196717 121197241 -78432909 + ERVL LTR ERVL 4234 4769 -885 1778 192 22 25 chr5 121197241 121197605 -78432545 + MLT1A1 LTR MaLR 1 363 -2 1101 347 54 45 chr5 121197605 121197817 -78432333 + ERVL LTR ERVL 4769 4977 -677 747 270 42 19 chr5 121198434 121198693 -78431457 + LTR16C LTR ERVL 227 491 0 781 169 0 15 chr5 121199489 121199619 -78430531 + FLAM_A SINE Alu 1 128 -5 204 111 0 0 chr5 121200815 121200851 -78429299 + (TTG)n Simple_repeat Simple_repeat 1 36 0 1703 128 68 0 chr5 121200855 121201121 -78429029 - AluSq SINE Alu -29 284 1 1572 188 27 3 chr5 121201511 121201803 -78428347 - AluJo SINE Alu -13 299 1 447 261 106 17 chr5 121201827 121202007 -78428143 - MIR SINE MIR -6 256 61 955 256 165 13 chr5 121202238 121202383 -78427767 - L2 LINE L2 -4 3309 3187 4912 112 97 3 chr5 121202383 121203096 -78427054 + LTR17 LTR ERV1 1 780 0 955 256 165 13 chr5 121203096 121203393 -78426757 - L2 LINE L2 -126 3187 2801 712 220 57 23 chr5 121203393 121203570 -78426580 - MER5A DNA MER1_type -2 187 5 * 1284 292 199 22 chr5 121203549 121204326 -78425824 - L2 LINE L2 -492 2822 1908 1331 230 118 21 chr5 121204356 121204695 -78425455 + MER69 DNA AcHobo 1 372 -854 230 351 13 0 chr5 121205471 121205548 -78424602 - MER5A DNA MER1_type -56 133 56 417 270 0 20 chr5 121205603 121205703 -78424447 + MER5A DNA MER1_type 9 106 -83 1797 224 53 2 chr5 121205729 121206242 -78423908 + L1M4 LINE L1 2494 3032 -3114 1409 172 0 0 chr5 121206242 121206469 -78423681 + AluJb SINE Alu 82 308 -4 635 206 201 123 chr5 121206510 121206872 -78423278 + LTR41 LTR ERVL 6 338 -435 1972 139 0 64 chr5 121206872 121207067 -78423083 - AluSx SINE Alu -1 311 144 2362 101 0 7 chr5 121207067 121207375 -78422775 - AluSg SINE Alu -4 306 1 1972 139 0 64 chr5 121207375 121207509 -78422641 - AluSx SINE Alu -168 144 3 635 206 201 123 chr5 121207509 121207853 -78422297 + LTR41 LTR ERVL 338 767 -6 4975 129 56 32 chr5 121209156 121210316 -78419834 - L1PA15 LINE L1 0 6165 4999 2123 103 0 7 chr5 121210416 121210697 -78419453 - AluSg SINE Alu -31 279 1 901 237 81 34 chr5 121211681 121212165 -78417985 - L1ME3A LINE L1 0 6170 5628 30 0 0 0 chr5 121212215 121212245 -78417905 + AT_rich Low_complexity Low_complexity 1 30 0 211 200 0 0 chr5 121213037 121213077 -78417073 + (CA)n Simple_repeat Simple_repeat 1 40 0 244 182 23 0 chr5 121214174 121214218 -78415932 - MER5A DNA MER1_type 0 189 145 1392 234 106 62 chr5 121214234 121214897 -78415253 + L1MEc LINE L1 297 988 -5408 2401 58 0 14 chr5 121215146 121215439 -78414711 - AluY SINE Alu -11 300 12 252 128 0 0 chr5 121216240 121216279 -78413871 + 5S rRNA rRNA 1 39 -82 1215 110 0 0 chr5 121216791 121216974 -78413176 - AluSg/x SINE Alu 0 312 130 2307 91 27 0 chr5 121219690 121219986 -78410164 - AluSg1 SINE Alu -5 304 1 234 0 0 0 chr5 121220847 121220873 -78409277 + (A)n Simple_repeat Simple_repeat 1 26 0 2493 41 0 3 chr5 121221044 121221335 -78408815 - AluY SINE Alu -21 290 1 862 231 30 0 chr5 121221550 121221753 -78408397 - MER3 DNA MER1_type 0 209 1 2411 221 100 3 chr5 121221824 121222536 -78407614 + L1PBa LINE L1 17 797 -6066 574 293 40 8 chr5 121222689 121222942 -78407208 + AluSp SINE Alu 37 297 -16 2481 144 62 46 chr5 121222957 121223027 -78407123 + Tigger3(Golem) DNA MER2_type 2446 2513 -516 1004 256 0 3 chr5 121223027 121223336 -78406814 + AluYb8 SINE Alu 1 308 0 2481 144 62 46 chr5 121223336 121223828 -78406322 + Tigger3(Golem) DNA MER2_type 2513 3017 -12 2428 71 17 0 chr5 121223855 121224149 -78406001 + AluSp SINE Alu 1 299 -14 21 57 0 0 chr5 121225686 121225721 -78404429 + AT_rich Low_complexity Low_complexity 1 35 0 1617 139 37 135 chr5 121226120 121226631 -78403519 + L1MB4 LINE L1 5720 6180 0 540 248 55 0 chr5 121226637 121226746 -78403404 + FLAM_A SINE Alu 2 116 -17 243 0 0 0 chr5 121226759 121226786 -78403364 + (TG)n Simple_repeat Simple_repeat 2 28 0 204 40 0 0 chr5 121226785 121226810 -78403340 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 2062 126 3 35 chr5 121226828 121227145 -78403005 + AluSx SINE Alu 1 307 -5 330 204 34 11 chr5 121227201 121227289 -78402861 - MER94 DNA DNA -44 90 1 180 225 0 169 chr5 121227892 121227963 -78402187 - MER5B DNA MER1_type -101 77 19 30 27 0 0 chr5 121228870 121228907 -78401243 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr5 121229066 121229088 -78401062 + AT_rich Low_complexity Low_complexity 1 22 0 2131 130 0 0 chr5 121229122 121229414 -78400736 - AluY SINE Alu -19 292 1 21 0 0 0 chr5 121229961 121229982 -78400168 + AT_rich Low_complexity Low_complexity 1 21 0 2071 115 13 43 chr5 121230707 121231081 -78399069 + MLT1B LTR MaLR 28 390 0 310 302 50 22 chr5 121231094 121231233 -78398917 + L1ME LINE L1 5623 5765 -399 2143 109 7 7 chr5 121232683 121232977 -78397173 - AluY SINE Alu -17 294 1 22 0 0 0 chr5 121233054 121233076 -78397074 + AT_rich Low_complexity Low_complexity 1 22 0 295 260 93 33 chr5 121233083 121233233 -78396917 + MIR SINE MIR 78 236 -26 2401 64 0 14 chr5 121233400 121233697 -78396453 - AluY SINE Alu -18 293 1 2331 99 0 7 chr5 121233697 121233999 -78396151 - AluSg SINE Alu -9 301 1 901 237 81 34 chr5 121234983 121235467 -78394683 - L1ME3A LINE L1 0 6170 5628 30 0 0 0 chr5 121235517 121235547 -78394603 + AT_rich Low_complexity Low_complexity 1 30 0 211 200 0 0 chr5 121236339 121236379 -78393771 + (CA)n Simple_repeat Simple_repeat 1 40 0 244 182 23 0 chr5 121237476 121237520 -78392630 - MER5A DNA MER1_type 0 189 145 1398 234 106 60 chr5 121237536 121238198 -78391952 + L1MEc LINE L1 297 988 -5408 2401 58 0 14 chr5 121238447 121238740 -78391410 - AluY SINE Alu -11 300 12 252 128 0 0 chr5 121239541 121239580 -78390570 + 5S rRNA rRNA 1 39 -82 1215 110 0 0 chr5 121240092 121240275 -78389875 - AluSg/x SINE Alu 0 310 128 2323 91 27 0 chr5 121242990 121243286 -78386864 - AluSg1 SINE Alu -5 304 1 225 0 0 0 chr5 121244147 121244172 -78385978 + (A)n Simple_repeat Simple_repeat 1 25 0 2190 93 3 3 chr5 121244344 121244633 -78385517 - AluSg SINE Alu -21 289 1 246 276 142 15 chr5 121244810 121244944 -78385206 + MIR SINE MIR 41 191 -71 286 363 49 0 chr5 121244984 121245086 -78385064 - MER91A DNA MER1_type 0 196 90 202 290 65 28 chr5 121245029 121245136 -78385014 - L2 LINE L2 -27 3286 3176 * 214 298 117 11 chr5 121245741 121245835 -78384315 + MIR SINE MIR 1 104 -158 479 226 16 0 chr5 121245902 121246026 -78384124 + L1 LINE L1 4771 4896 -1250 238 48 0 48 chr5 121246126 121246168 -78383982 + (TTC)n Simple_repeat Simple_repeat 3 42 0 580 270 160 20 chr5 121246169 121246187 -78383963 + L2 LINE L2 1985 1999 -1315 2552 74 0 0 chr5 121246187 121246496 -78383654 - AluSc SINE Alu 0 309 1 580 270 160 20 chr5 121246496 121246770 -78383380 + L2 LINE L2 1999 2318 -996 * 650 231 169 5 chr5 121246764 121246959 -78383191 + MIR SINE MIR 23 249 -13 340 264 46 0 chr5 121246998 121247085 -78383065 + L2 LINE L2 3182 3272 0 303 245 218 74 chr5 121247532 121247748 -78382402 + L1M2 LINE L1 692 938 -5911 243 0 0 0 chr5 121248841 121248868 -78381282 + (A)n Simple_repeat Simple_repeat 1 27 0 2493 41 0 3 chr5 121249039 121249330 -78380820 - AluY SINE Alu -21 290 1 862 231 30 0 chr5 121249545 121249748 -78380402 - MER3 DNA MER1_type 0 209 1 11370 192 57 34 chr5 121249819 121252782 -78377368 + L1PB1 LINE L1 17 2910 -3957 2036 107 50 0 chr5 121252782 121253063 -78377087 - AluSx SINE Alu -17 295 1 11370 192 57 34 chr5 121253063 121254169 -78375981 + L1PB1 LINE L1 2910 3989 -2878 2074 111 0 30 chr5 121254169 121254467 -78375683 + AluSp SINE Alu 1 289 -24 1293 92 0 6 chr5 121254468 121254642 -78375508 + AluSq SINE Alu 132 304 -9 11370 192 57 34 chr5 121254642 121256552 -78373598 + L1PB1 LINE L1 3989 6332 -535 2054 136 0 7 chr5 121256552 121256846 -78373304 + AluSx SINE Alu 1 292 -20 11370 192 57 34 chr5 121256846 121257395 -78372755 + L1PB1 LINE L1 6332 6867 0 1281 106 172 37 chr5 121259510 121259783 -78370367 - MER33 DNA MER1_type -8 316 7 1321 197 17 53 chr5 121259827 121260127 -78370023 + AluJo SINE Alu 1 289 -23 309 274 95 0 chr5 121260476 121260571 -78369579 + L2 LINE L2 3169 3272 0 262 314 8 34 chr5 121260595 121260713 -78369437 - L3 LINE CR1 -8 1569 1455 405 249 130 77 chr5 121260728 121261096 -78369054 + Charlie8 DNA MER1_type 13 367 -2050 354 293 201 51 chr5 121261206 121261520 -78368630 - L3 LINE CR1 -119 1458 1098 217 191 0 0 chr5 121261679 121261721 -78368429 - L2 LINE L2 -3 3310 3269 2299 98 3 0 chr5 121262230 121262525 -78367625 - AluSp SINE Alu -15 298 3 1823 160 105 12 chr5 121263624 121263967 -78366183 - THE1C LTR MaLR 0 375 1 5787 125 11 13 chr5 121263973 121264845 -78365305 - THE1C-int LTR MaLR -6 1574 704 7991 185 112 9 chr5 121264847 121266439 -78363711 + MER52A LTR ERV1 1 1755 0 3457 121 140 61 chr5 121266439 121267090 -78363060 - THE1C-int LTR MaLR -875 705 4 2063 150 68 8 chr5 121267093 121267447 -78362703 - THE1C LTR MaLR 0 375 1 29 0 0 0 chr5 121268389 121268418 -78361732 + GC_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr5 121268448 121268478 -78361672 + GC_rich Low_complexity Low_complexity 1 30 0 455 288 37 0 chr5 121271521 121271684 -78358466 + L1ME LINE L1 5551 5719 -402 253 198 0 0 chr5 121271703 121271757 -78358393 + L1ME LINE L1 5782 5828 -342 2369 79 0 0 chr5 121271779 121272069 -78358081 + AluSx SINE Alu 7 296 -16 201 178 0 0 chr5 121272819 121272864 -78357286 + (TG)n Simple_repeat Simple_repeat 1 45 0 185 231 108 62 chr5 121272966 121273031 -78357119 - L2 LINE L2 -557 2757 2690 794 186 68 0 chr5 121274364 121274541 -78355609 + MER53 DNA DNA 1 189 0 304 350 8 0 chr5 121274616 121274733 -78355417 - MIR SINE MIR 0 262 145 2197 109 3 10 chr5 121275183 121275494 -78354656 + AluSx SINE Alu 1 309 -3 188 33 0 33 chr5 121277221 121277251 -78352899 + (GA)n Simple_repeat Simple_repeat 2 30 0 495 253 126 0 chr5 121277845 121278019 -78352131 + MER115 DNA AcHobo 240 435 -258 348 161 0 0 chr5 121280180 121280242 -78349908 + A-rich Low_complexity Low_complexity 1 62 0 565 253 55 73 chr5 121281239 121281528 -78348622 - MLT1J LTR MaLR -221 290 7 420 224 43 9 chr5 121281530 121281646 -78348504 + MIR3 SINE MIR 87 206 -2 382 254 31 0 chr5 121282702 121282832 -78347318 - L1MB7 LINE L1 0 6184 6051 1420 250 83 16 chr5 121282838 121283286 -78346864 - L1M4 LINE L1 -1639 4507 4030 637 174 73 84 chr5 121283266 121283541 -78346609 - L1M4 LINE L1 -3143 3003 2732 * 578 226 20 111 chr5 121283546 121283629 -78346521 - MER58A DNA MER1_type -2198 222 133 2307 189 34 12 chr5 121283629 121284042 -78346108 - MSTB LTR MaLR -4 422 1 578 226 20 111 chr5 121284042 121284157 -78345993 - MER58A DNA MER1_type -2287 133 42 1520 252 129 4 chr5 121284159 121284687 -78345463 + L1MC4 LINE L1 5374 5967 -2075 * 2714 173 55 0 chr5 121284328 121284838 -78345312 + L1MB4 LINE L1 5602 6139 -41 460 252 36 9 chr5 121284880 121284991 -78345159 - L1M4 LINE L1 -3407 2739 2626 207 0 0 0 chr5 121284994 121285017 -78345133 + (TC)n Simple_repeat Simple_repeat 2 24 0 1766 146 3 67 chr5 121285017 121285345 -78344805 - AluJo SINE Alu -5 307 1 323 192 20 111 chr5 121285691 121285790 -78344360 - L2 LINE L2 -2 3311 3222 1439 93 0 0 chr5 121287123 121287305 -78342845 - AluSg/x SINE Alu -11 301 120 629 263 94 77 chr5 121288399 121288749 -78341401 + MLT1J LTR MaLR 156 511 0 712 227 40 11 chr5 121288749 121288925 -78341225 + MIR SINE MIR 69 249 -13 558 289 37 31 chr5 121289620 121289854 -78340296 - MIR SINE MIR -1 261 23 313 123 0 26 chr5 121290048 121290112 -78340038 - FRAM/FAM SINE Alu -77 89 41 268 100 350 17 chr5 121291439 121291499 -78338651 + MADE1 DNA Mariner 1 80 0 203 156 22 44 chr5 121291507 121291552 -78338598 + L2 LINE L2 3262 3305 -8 2206 111 70 6 chr5 121291897 121292256 -78337894 - L1MC3 LINE L1 0 7785 7404 2408 74 0 7 chr5 121292256 121292554 -78337596 - AluSp SINE Alu -17 296 1 207 312 35 78 chr5 121293227 121293368 -78336782 - L2 LINE L2 -226 3046 2912 211 293 17 0 chr5 121293507 121293565 -78336585 - MER5A DNA MER1_type -6 183 125 1029 133 0 0 chr5 121293566 121293709 -78336441 + FAM SINE Alu 1 143 -42 261 247 11 75 chr5 121293710 121293803 -78336347 - MER5A DNA MER1_type -94 95 9 629 213 66 6 chr5 121295399 121295582 -78334568 + L1PBa LINE L1 4 197 -6666 * 7995 137 54 6 chr5 121295579 121296970 -78333180 + L1PBa LINE L1 1392 2849 -4014 1696 174 14 4 chr5 121297106 121297387 -78332763 + AluJb SINE Alu 1 284 -28 201 282 0 0 chr5 121297599 121297638 -78332512 + L2 LINE L2 350 388 -2926 322 317 54 15 chr5 121297749 121297897 -78332253 + MER5A DNA MER1_type 2 165 -24 3347 245 101 11 chr5 121298203 121299278 -78330872 - L1MEc LINE L1 -869 1707 493 1168 230 99 41 chr5 121299313 121299678 -78330472 - L1MEc LINE L1 -5974 422 37 554 255 136 54 chr5 121299690 121300083 -78330067 - L1MC5 LINE L1 -187 7774 7414 1345 127 122 0 chr5 121300083 121300288 -78329862 - MER30 DNA MER1_type 0 230 1 554 255 136 54 chr5 121300288 121300686 -78329464 - L1MC5 LINE L1 -547 7414 7050 360 0 0 0 chr5 121300721 121300761 -78329389 + (TG)n Simple_repeat Simple_repeat 2 41 0 188 244 0 0 chr5 121301229 121301274 -78328876 - L3 LINE CR1 -282 1295 1251 282 340 113 0 chr5 121301327 121301433 -78328717 - L3 LINE CR1 -467 1110 993 282 224 179 0 chr5 121301832 121301899 -78328251 + MER115 DNA AcHobo 1 79 -614 544 333 95 26 chr5 121301925 121302189 -78327961 + MER115 DNA AcHobo 152 433 -260 397 169 91 0 chr5 121302574 121302651 -78327499 + Zaphod DNA AcHobo 2809 2892 -1139 359 147 118 59 chr5 121302660 121302762 -78327388 + MER115 DNA AcHobo 535 642 -51 940 220 11 11 chr5 121303561 121303747 -78326403 - MER5A DNA MER1_type -3 186 1 547 312 41 18 chr5 121303885 121304148 -78326002 + L1MC/D LINE L1 5434 5713 -449 262 303 37 28 chr5 121304872 121304981 -78325169 + MIR SINE MIR 36 145 -63 336 294 82 27 chr5 121305090 121305274 -78324876 + L1ME3A LINE L1 5537 5730 -391 279 125 83 0 chr5 121305299 121305347 -78324803 - MADE1 DNA Mariner -28 52 1 258 355 39 0 chr5 121306009 121306164 -78323986 - L1ME LINE L1 -383 5738 5578 254 289 76 36 chr5 121306266 121306491 -78323659 - L1ME LINE L1 -1542 4604 4371 291 54 0 0 chr5 121306519 121306556 -78323594 + (TA)n Simple_repeat Simple_repeat 2 38 0 867 174 43 6 chr5 121306581 121306742 -78323408 - L1ME3A LINE L1 -8 6162 5996 516 237 86 14 chr5 121306749 121306888 -78323262 + L1ME3A LINE L1 5883 6031 -139 313 195 85 0 chr5 121306875 121306957 -78323193 - L1ME3A LINE L1 -190 5974 5886 * 713 286 131 57 chr5 121306963 121308105 -78322045 - L1ME LINE L1 -1819 4327 3105 566 249 186 5 chr5 121309116 121309309 -78320841 - MIR SINE MIR -18 244 17 207 0 0 0 chr5 121310947 121310970 -78319180 + (A)n Simple_repeat Simple_repeat 1 23 0 1831 159 3 7 chr5 121312837 121313139 -78317011 + AluJb SINE Alu 1 301 -11 2052 110 11 0 chr5 121314363 121314644 -78315506 - AluSx SINE Alu -28 284 1 1985 143 3 0 chr5 121314645 121314946 -78315204 - AluSx SINE Alu -10 302 1 2048 126 0 7 chr5 121315494 121315788 -78314362 - AluSx SINE Alu -20 292 1 21 0 0 0 chr5 121316083 121316104 -78314046 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 121316708 121316732 -78313418 + AT_rich Low_complexity Low_complexity 1 24 0 270 284 116 26 chr5 121317490 121317645 -78312505 + HAL1 LINE L1 2230 2398 -109 * 279 316 21 0 chr5 121317639 121317734 -78312416 + L1MC4 LINE L1 6903 6999 -1043 224 123 46 15 chr5 121317734 121317799 -78312351 + (TA)n Simple_repeat Simple_repeat 2 68 0 782 237 98 5 chr5 121317894 121318140 -78312010 + L1MC5 LINE L1 6983 7249 -733 4433 191 30 18 chr5 121318145 121319964 -78310186 + L1MB4 LINE L1 4333 6166 -14 851 211 53 41 chr5 121320035 121320353 -78309797 + L1MC5 LINE L1 7589 7910 -51 21 0 0 0 chr5 121321463 121321484 -78308666 + AT_rich Low_complexity Low_complexity 1 21 0 334 336 35 26 chr5 121321559 121321672 -78308478 - MIR SINE MIR -65 143 30 370 44 0 0 chr5 121321838 121321883 -78308267 - L1PA5 LINE L1 -594 5560 5516 4725 54 12 0 chr5 121321883 121322477 -78307673 + L1PA5 LINE L1 5553 6153 -1 1620 190 77 65 chr5 121322584 121323079 -78307071 + MLT1D LTR MaLR 5 505 0 1383 140 155 23 chr5 121323934 121324199 -78305951 + AluJo SINE Alu 1 300 -2 2154 104 10 10 chr5 121324997 121325295 -78304855 - AluSx SINE Alu -14 298 1 1251 160 78 0 chr5 121325527 121325746 -78304404 + MER46A DNA MER2_type 1 236 0 36 0 0 0 chr5 121325882 121325918 -78304232 + AT_rich Low_complexity Low_complexity 1 36 0 1481 259 179 9 chr5 121326604 121327141 -78303009 + MLT2E LTR ERVL 1 628 0 212 280 65 32 chr5 121327143 121327236 -78302914 + MIR SINE MIR 154 249 -13 22 35 0 0 chr5 121327384 121327413 -78302737 + AT_rich Low_complexity Low_complexity 1 29 0 232 349 60 18 chr5 121327436 121327602 -78302548 - L2 LINE L2 -930 2384 2212 497 289 76 94 chr5 121327631 121328067 -78302083 - L2 LINE L2 -34 3279 2852 260 272 81 37 chr5 121328113 121328249 -78301901 - L2 LINE L2 -1298 2016 1875 247 321 99 0 chr5 121329441 121329572 -78300578 - MIR SINE MIR -67 195 52 23 33 0 0 chr5 121330403 121330433 -78299717 + AT_rich Low_complexity Low_complexity 1 30 0 3826 218 89 8 chr5 121331096 121332098 -78298052 + Tigger6a DNA MER2_type 1 1083 0 290 204 9 56 chr5 121332589 121332697 -78297453 + A-rich Low_complexity Low_complexity 4 106 0 195 129 0 0 chr5 121332874 121332905 -78297245 + (A)n Simple_repeat Simple_repeat 1 31 0 366 227 76 34 chr5 121332932 121333051 -78297099 + MER58 DNA MER1_type 2 125 -2295 4911 215 125 83 chr5 121333066 121334962 -78295188 + L1MC4a LINE L1 5420 7395 -413 21 36 0 0 chr5 121335521 121335549 -78294601 + AT_rich Low_complexity Low_complexity 1 28 0 1182 122 6 17 chr5 121337639 121337820 -78292330 - FRAM SINE Alu 0 176 1 263 265 69 39 chr5 121338078 121338180 -78291970 + MIR SINE MIR 109 213 -49 1745 145 7 20 chr5 121338393 121338690 -78291460 - AluJb SINE Alu -19 293 1 23 0 0 0 chr5 121340740 121340763 -78289387 + AT_rich Low_complexity Low_complexity 1 23 0 251 273 30 0 chr5 121341078 121341144 -78289006 - MIR SINE MIR -19 243 176 300 255 102 0 chr5 121341251 121341349 -78288801 - MIR3 SINE MIR -44 164 57 1983 125 7 10 chr5 121342028 121342324 -78287826 + AluSx SINE Alu 1 295 -17 260 232 61 37 chr5 121342400 121342482 -78287668 + L1ME LINE L1 5574 5657 -464 306 323 130 7 chr5 121342506 121342782 -78287368 + L1ME4a LINE L1 5574 5883 -238 1173 227 107 73 chr5 121342917 121343530 -78286620 - MLT1E2 LTR MaLR 0 626 1 2595 52 0 0 chr5 121343530 121343838 -78286312 + AluY SINE Alu 1 308 -3 2055 123 3 3 chr5 121343945 121344238 -78285912 - AluSx SINE Alu -19 293 1 311 291 74 82 chr5 121344728 121344972 -78285178 + MIR SINE MIR 3 244 -18 2233 96 0 13 chr5 121345416 121345718 -78284432 + AluSx SINE Alu 1 298 -14 194 341 88 59 chr5 121345971 121346141 -78284009 + MER5A DNA MER1_type 15 189 0 22 0 0 0 chr5 121347021 121347043 -78283107 + AT_rich Low_complexity Low_complexity 1 22 0 483 311 61 7 chr5 121347668 121347816 -78282334 + MIR3 SINE MIR 44 199 -9 282 301 19 29 chr5 121348076 121348179 -78281971 + MIR SINE MIR 33 134 -128 1841 168 143 61 chr5 121348617 121349112 -78281038 - LTR10A LTR ERV1 -61 548 13 229 211 18 0 chr5 121349245 121349302 -78280848 - L1M2 LINE L1 -880 5432 5375 1476 276 81 8 chr5 121350008 121350647 -78279503 - L1ME3A LINE L1 -9 6153 5451 37 0 0 0 chr5 121351032 121351069 -78279081 + AT_rich Low_complexity Low_complexity 1 37 0 594 224 0 68 chr5 121353464 121353580 -78276570 + MER105 DNA DNA 7 113 -91 1637 138 117 9 chr5 121353580 121353906 -78276244 - MER46B DNA MER2_type 0 236 1 594 224 0 68 chr5 121353906 121353936 -78276214 + MER105 DNA DNA 113 143 -61 264 209 0 70 chr5 121354121 121354207 -78275943 - MIR SINE MIR -10 252 173 282 338 131 19 chr5 121354295 121354455 -78275695 + MIR SINE MIR 2 179 -83 271 366 38 23 chr5 121355078 121355209 -78274941 - MIR3 SINE MIR -32 176 44 304 241 35 69 chr5 121355322 121355438 -78274712 - MER5B DNA MER1_type -66 112 1 942 204 63 0 chr5 121355446 121355652 -78274498 + MER20 DNA MER1_type 1 219 0 2159 98 0 52 chr5 121356580 121356906 -78273244 + AluSq SINE Alu 5 313 0 225 244 0 144 chr5 121358003 121358093 -78272057 + L2 LINE L2 2999 3075 -197 259 284 0 14 chr5 121358127 121358201 -78271949 + MER5A DNA MER1_type 15 87 -102 228 237 13 92 chr5 121358433 121358509 -78271641 - MER5B DNA MER1_type -108 70 1 388 282 60 0 chr5 121358550 121358667 -78271483 - MER5A DNA MER1_type -7 182 59 2342 76 7 3 chr5 121358753 121359056 -78271094 + AluSc SINE Alu 1 304 -5 254 315 65 0 chr5 121360691 121360783 -78269367 - L2 LINE L2 -3 3310 3213 613 166 62 41 chr5 121360799 121360944 -78269206 + MER3 DNA MER1_type 62 209 0 298 256 19 48 chr5 121360956 121361117 -78269033 - L2 LINE L2 -68 3245 3033 25 0 0 0 chr5 121365084 121365109 -78265041 + AT_rich Low_complexity Low_complexity 1 25 0 2307 99 0 0 chr5 121365291 121365583 -78264567 - AluSx SINE Alu -20 292 1 210 37 0 0 chr5 121366082 121366109 -78264041 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1602 160 21 32 chr5 121366112 121366393 -78263757 - AluJo SINE Alu -30 282 5 1942 123 43 13 chr5 121367614 121367914 -78262236 - AluSg SINE Alu -1 309 1 275 152 30 10 chr5 121367968 121368067 -78262083 + (TA)n Simple_repeat Simple_repeat 1 101 0 24 53 0 0 chr5 121368111 121368149 -78262001 + AT_rich Low_complexity Low_complexity 1 38 0 304 268 79 53 chr5 121369616 121369806 -78260344 - L1M4 LINE L1 -3617 2529 2335 268 206 63 0 chr5 121369958 121370021 -78260129 - L2 LINE L2 -98 3215 3149 190 379 103 58 chr5 121370069 121370496 -78259654 + L2 LINE L2 2823 3268 -4 206 255 0 0 chr5 121370823 121370874 -78259276 + T-rich Low_complexity Low_complexity 4 54 0 2319 89 13 7 chr5 121371263 121371566 -78258584 - AluSq SINE Alu -8 305 1 772 250 44 0 chr5 121371701 121371881 -78258269 + MIR SINE MIR 8 195 -67 248 268 70 14 chr5 121372349 121372420 -78257730 - MER5C DNA MER1_type -249 75 1 242 316 52 22 chr5 121372521 121372657 -78257493 - L2 LINE L2 -235 3037 2898 304 278 17 35 chr5 121372732 121372847 -78257303 + L2 LINE L2 2320 2432 -882 725 163 150 6 chr5 121373018 121373178 -78256972 - MER5A DNA MER1_type -2 187 5 924 210 90 5 chr5 121373482 121373682 -78256468 + MER20 DNA MER1_type 3 219 0 2004 141 27 7 chr5 121374087 121374386 -78255764 - AluJb SINE Alu -7 305 1 494 227 61 49 chr5 121374387 121374550 -78255600 + MIR SINE MIR 97 261 -1 505 281 15 22 chr5 121375607 121375742 -78254408 - MIR SINE MIR -105 157 24 186 281 35 35 chr5 121377387 121377444 -78252706 + L2 LINE L2 3167 3223 -90 21 36 0 0 chr5 121379147 121379175 -78250975 + AT_rich Low_complexity Low_complexity 1 28 0 444 286 0 30 chr5 121379478 121379611 -78250539 + MIR SINE MIR 75 203 -59 21 0 0 0 chr5 121379653 121379674 -78250476 + AT_rich Low_complexity Low_complexity 1 21 0 1790 121 57 14 chr5 121379903 121380184 -78249966 - AluJb SINE Alu -19 293 1 2177 128 0 0 chr5 121380369 121380667 -78249483 - AluSx SINE Alu -14 298 1 342 207 143 64 chr5 121380828 121380968 -78249182 + MER117 DNA MER1_type 5 155 -42 1384 229 109 29 chr5 121381104 121381553 -78248597 + L1MC4a LINE L1 5380 5864 -1944 249 266 36 36 chr5 121381772 121381911 -78248239 - L1MC5 LINE L1 -184 7777 7639 268 279 171 28 chr5 121381926 121382177 -78247973 + L1MC4a LINE L1 5880 6166 -1642 1465 112 46 53 chr5 121382481 121382766 -78247384 - L1MA9 LINE L1 -165 6147 5865 1040 141 10 26 chr5 121382781 121382973 -78247177 + L1MA9 LINE L1 6119 6307 -5 315 266 101 28 chr5 121383586 121383695 -78246455 + MIR SINE MIR 33 149 -113 724 309 103 51 chr5 121384513 121385353 -78244797 - L2 LINE L2 -6 3307 2419 3001 164 27 14 chr5 121385388 121385948 -78244202 - L1MB7 LINE L1 -23 6161 5595 1512 166 18 32 chr5 121385977 121386261 -78243889 + AluJo SINE Alu 5 284 -28 584 222 20 13 chr5 121386280 121386433 -78243717 - L1MB7 LINE L1 -841 5305 5152 * 1660 138 62 25 chr5 121386421 121386746 -78243404 - L1M4 LINE L1 -578 6104 5768 1282 164 78 18 chr5 121386757 121387038 -78243112 + LTR54B LTR ERV1 13 310 -188 672 174 45 38 chr5 121387048 121387180 -78242970 - FLAM_A SINE Alu 0 133 1 2188 117 0 0 chr5 121387326 121387624 -78242526 - AluSq SINE Alu -15 298 1 751 99 93 41 chr5 121388798 121388970 -78241180 + LTR54B LTR ERV1 304 484 -14 1228 153 5 19 chr5 121389152 121389361 -78240789 - AluJo SINE Alu -106 206 1 5450 211 44 33 chr5 121389361 121390938 -78239212 - L1M4 LINE L1 -971 5673 4079 4273 218 56 18 chr5 121390944 121392336 -78237814 - L1M4 LINE L1 -4536 2110 656 495 164 26 14 chr5 121392338 121392457 -78237693 - MLT1D LTR MaLR -7 498 261 1765 135 127 36 chr5 121392457 121392843 -78237307 + L1MA7 LINE L1 5869 6289 -2 1297 198 119 16 chr5 121392850 121393153 -78236997 - MLT1D LTR MaLR -118 387 54 1633 183 81 43 chr5 121393601 121393976 -78236174 + MLT1B LTR MaLR 1 589 -1 637 159 190 61 chr5 121394370 121394533 -78235617 - MER20 DNA MER1_type -6 213 30 730 232 25 127 chr5 121394962 121395285 -78234865 - L2 LINE L2 -10 3303 3014 256 257 170 6 chr5 121395439 121395610 -78234540 - MIR SINE MIR -37 225 27 504 278 114 58 chr5 121395773 121396255 -78233895 - L2 LINE L2 -1375 1939 1431 1096 269 117 73 chr5 121396603 121396956 -78233194 - L1MC4a LINE L1 -1536 6272 5936 2173 193 35 9 chr5 121396956 121397411 -78232739 - MLT1C LTR MaLR 0 467 1 1096 269 117 73 chr5 121397411 121397875 -78232275 - L1MC4a LINE L1 -1872 5936 5419 1552 147 94 67 chr5 121397875 121398216 -78231934 + Tigger1 DNA MER2_type 3 352 -2066 * 2209 118 77 6 chr5 121398212 121398577 -78231573 + Tigger1 DNA MER2_type 1954 2344 -74 293 263 72 26 chr5 121398613 121398765 -78231385 - L1MC4a LINE L1 -2388 5420 5262 234 308 94 54 chr5 121398792 121399501 -78230649 - L1MC4a LINE L1 -913 5233 4496 1140 291 82 22 chr5 121399820 121400281 -78229869 - LTR16C LTR ERVL -2 489 1 237 231 46 0 chr5 121400376 121400441 -78229709 - MLT1J LTR MaLR -347 164 97 29 0 0 0 chr5 121402225 121402254 -78227896 + AT_rich Low_complexity Low_complexity 1 29 0 858 304 143 20 chr5 121403921 121404660 -78225490 + L1M4 LINE L1 2745 3574 -2572 1647 160 31 31 chr5 121404676 121404970 -78225180 - AluJo SINE Alu -17 295 2 296 288 159 6 chr5 121404978 121405148 -78225002 + L1P LINE L1 3583 3778 -2368 229 300 22 44 chr5 121405305 121405395 -78224755 + LTR67 LTR ERVL 103 190 -367 432 295 93 43 chr5 121405797 121406302 -78223848 + L1M4 LINE L1 3876 4409 -1737 231 220 20 0 chr5 121406304 121406354 -78223796 + L2 LINE L2 3194 3244 -69 554 302 52 24 chr5 121406580 121406828 -78223322 - HAL1 LINE L1 -809 1698 1444 376 287 236 21 chr5 121407568 121407999 -78222151 + L2 LINE L2 2777 3311 -2 218 331 113 8 chr5 121408020 121408144 -78222006 + L2 LINE L2 3173 3309 -4 21 57 0 0 chr5 121408371 121408406 -78221744 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr5 121408571 121408591 -78221559 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1904 96 56 11 chr5 121408592 121408921 -78221229 - AluY SINE Alu 0 341 1 357 343 30 83 chr5 121409002 121409302 -78220848 - L2 LINE L2 0 3272 2989 721 319 96 29 chr5 121410126 121410618 -78219532 + LTR67 LTR ERVL 25 549 -8 243 0 0 0 chr5 121411644 121411671 -78218479 + (TA)n Simple_repeat Simple_repeat 2 28 0 243 0 0 0 chr5 121411670 121411697 -78218453 + (GA)n Simple_repeat Simple_repeat 2 28 0 213 262 0 16 chr5 121412165 121412226 -78217924 + (CA)n Simple_repeat Simple_repeat 1 60 0 183 80 0 0 chr5 121412306 121412331 -78217819 + (T)n Simple_repeat Simple_repeat 1 25 0 349 208 88 50 chr5 121412358 121412517 -78217633 - L1MC4a LINE L1 -1841 5967 5803 673 282 79 9 chr5 121413737 121413964 -78216186 + MLT1J1 LTR MaLR 201 443 -3 323 326 33 5 chr5 121414043 121414227 -78215923 + L1ME2 LINE L1 5760 5948 -216 332 281 171 43 chr5 121415207 121415371 -78214779 + MIR SINE MIR 13 197 -65 209 221 0 52 chr5 121415868 121415988 -78214162 + L2 LINE L2 3158 3313 0 850 228 110 79 chr5 121417070 121417599 -78212551 - L2 LINE L2 -94 3219 2667 29 0 0 0 chr5 121417660 121417689 -78212461 + AT_rich Low_complexity Low_complexity 1 29 0 636 323 31 35 chr5 121418168 121418222 -78211928 - MIR SINE MIR 0 262 209 1174 181 17 72 chr5 121418222 121418459 -78211691 - MER58A DNA MER1_type 0 224 1 636 323 31 35 chr5 121418459 121418658 -78211492 - MIR SINE MIR -53 209 10 202 173 308 0 chr5 121418728 121418780 -78211370 + MIR SINE MIR 123 190 -72 21 0 0 0 chr5 121419500 121419521 -78210629 + AT_rich Low_complexity Low_complexity 1 21 0 4153 164 28 36 chr5 121419522 121420250 -78209900 - L1MD2 LINE L1 -20 6339 5617 1417 160 193 48 chr5 121420250 121420624 -78209526 - MSTC LTR MaLR 0 428 1 4153 164 28 36 chr5 121420624 121420692 -78209458 - L1MD2 LINE L1 -742 5617 5550 291 212 0 30 chr5 121421341 121421407 -78208743 - L2 LINE L2 -13 3300 3237 489 213 87 8 chr5 121421536 121421663 -78208487 - MIR SINE MIR -22 240 104 618 247 16 53 chr5 121422688 121422878 -78207272 - LTR1 LTR ERV1 -602 183 1 256 135 0 39 chr5 121424030 121424041 -78206109 + MLT2B3 LTR ERVL 505 515 -39 296 83 21 0 chr5 121424041 121424089 -78206061 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 256 135 0 39 chr5 121424089 121424129 -78206021 + MLT2B3 LTR ERVL 515 554 0 2474 161 50 33 chr5 121425241 121425763 -78204387 - L1MB3 LINE L1 -1 6182 5652 1779 220 86 65 chr5 121426000 121426553 -78203597 + L1MC4 LINE L1 7337 7906 -136 294 29 0 0 chr5 121426553 121426588 -78203562 + (TG)n Simple_repeat Simple_repeat 2 36 0 1779 220 86 65 chr5 121426588 121426676 -78203474 + L1MC4 LINE L1 7906 7991 -51 305 261 87 43 chr5 121426693 121426854 -78203296 + MER52A LTR ERV1 1 168 -1587 * 7776 161 35 1 chr5 121426821 121428079 -78202071 + MER52A LTR ERV1 455 1755 0 22 0 0 0 chr5 121428432 121428454 -78201696 + AT_rich Low_complexity Low_complexity 1 22 0 1437 283 53 38 chr5 121428676 121429424 -78200726 + L1MC4a LINE L1 5254 6015 -106 490 307 74 11 chr5 121429485 121429661 -78200489 + L1ME LINE L1 5482 5668 -453 836 241 60 94 chr5 121429695 121430137 -78200013 + HAL1b LINE L1 629 1052 -296 348 254 77 23 chr5 121430137 121430267 -78199883 + MER91C DNA MER1_type 1 137 -3 836 241 60 94 chr5 121430267 121430356 -78199794 + HAL1b LINE L1 1052 1142 -206 542 313 109 0 chr5 121430381 121430573 -78199577 + MIR SINE MIR 1 213 -49 240 252 47 63 chr5 121432075 121432202 -78197948 - 7SK RNA RNA -68 125 1 2221 115 0 0 chr5 121433901 121434197 -78195953 - AluSx SINE Alu -16 296 1 628 297 42 14 chr5 121434906 121434929 -78195221 - MIR SINE MIR -33 229 208 2184 58 41 21 chr5 121434929 121435220 -78194930 - AluY SINE Alu -14 297 1 628 297 42 14 chr5 121435220 121435408 -78194742 - MIR SINE MIR -54 208 12 1255 244 67 17 chr5 121436193 121436550 -78193600 + LTR16A LTR ERVL 76 450 0 1714 233 146 6 chr5 121436820 121437300 -78192850 + MLT1H LTR MaLR 1 547 -2 26 30 0 0 chr5 121437813 121437846 -78192304 + AT_rich Low_complexity Low_complexity 1 33 0 818 44 0 0 chr5 121439107 121439198 -78190952 + L1PA7 LINE L1 6051 6141 -13 461 239 26 0 chr5 121439759 121439876 -78190274 - MIR SINE MIR -14 248 129 1727 139 106 0 chr5 121439960 121440233 -78189917 + AluSx SINE Alu 1 302 -10 266 358 29 29 chr5 121440612 121440785 -78189365 + L3b LINE CR1 1290 1462 -121 477 316 159 40 chr5 121441568 121441793 -78188357 - L2 LINE L2 0 3272 3075 1562 204 62 60 chr5 121441793 121442258 -78187892 - MER31B LTR ERV1 0 466 1 477 316 159 40 chr5 121442258 121442582 -78187568 - L2 LINE L2 -197 3075 2791 2439 130 32 69 chr5 121442582 121443044 -78187106 - MER65A LTR ERV1 0 445 1 477 316 159 40 chr5 121443044 121443345 -78186805 - L2 LINE L2 -481 2791 2306 235 216 0 0 chr5 121443800 121443851 -78186299 + L1ME LINE L1 5834 5884 -286 254 265 73 0 chr5 121444146 121444214 -78185936 + MLT1F1 LTR MaLR 35 107 -460 2771 201 35 13 chr5 121444215 121444811 -78185339 + L1MD3 LINE L1 7387 7995 0 555 194 0 0 chr5 121446432 121446525 -78183625 - MER20 DNA MER1_type 0 219 127 527 128 11 21 chr5 121446527 121446621 -78183529 + MER53 DNA DNA 1 93 -96 * 749 206 57 23 chr5 121446591 121446766 -78183384 - MER20 DNA MER1_type -38 181 1 225 256 40 80 chr5 121447142 121447267 -78182883 - MIR SINE MIR -6 256 137 196 161 0 0 chr5 121450692 121450723 -78179427 - MIR SINE MIR -117 145 115 235 309 86 26 chr5 121451190 121451342 -78178808 + LTR16C LTR ERVL 328 488 -3 3628 199 104 67 chr5 121451458 121452612 -78177538 - MER52C LTR ERV1 0 1278 1 263 180 0 20 chr5 121452571 121452621 -78177529 + MER52A LTR ERV1 1 49 -1706 * 818 67 19 0 chr5 121452621 121452725 -78177425 - MER52-int LTR ERV1 -8 7083 6978 249 281 15 22 chr5 121452748 121452828 -78177322 - MIR SINE MIR -58 150 70 215 326 136 16 chr5 121452842 121453026 -78177124 - MIR SINE MIR -7 255 50 568 255 92 11 chr5 121453090 121453274 -78176876 + MIR SINE MIR 8 206 -56 4491 139 12 25 chr5 121453295 121454015 -78176135 + MER50 LTR ERV1 1 711 -23 205 214 24 0 chr5 121454103 121454145 -78176005 - MIR SINE MIR -14 248 206 254 239 138 29 chr5 121454444 121454582 -78175568 + L1MC5 LINE L1 7765 7917 -44 298 221 0 13 chr5 121456071 121456148 -78174002 + L1M LINE L1 5348 5423 -2385 5314 139 58 9 chr5 121456215 121457144 -78173006 - L1PA15 LINE L1 -9 6156 5177 8108 78 28 1 chr5 121457144 121458999 -78171151 - L1PA7 LINE L1 0 6154 4278 5314 139 58 9 chr5 121458999 121459176 -78170974 - L1PA15 LINE L1 -988 5177 5010 478 182 52 32 chr5 121459150 121459304 -78170846 - L1 LINE L1 -2977 3169 3013 * 346 271 217 8 chr5 121459308 121459437 -78170713 + L2 LINE L2 2608 2763 -551 24 0 0 0 chr5 121459444 121459468 -78170682 + AT_rich Low_complexity Low_complexity 1 24 0 339 295 98 12 chr5 121459468 121459712 -78170438 - L1MC4a LINE L1 -1898 5910 5646 300 303 59 45 chr5 121459901 121460122 -78170028 - L1MEd LINE L1 -4916 1203 980 853 191 6 6 chr5 121461495 121461652 -78168498 - FRAM SINE Alu -9 157 1 6708 120 18 3 chr5 121462731 121464114 -78166036 - L1MA2 LINE L1 -8 6296 4894 2188 115 7 7 chr5 121464232 121464537 -78165613 - AluSx SINE Alu -7 305 1 396 227 80 80 chr5 121465299 121465449 -78164701 - MER5B DNA MER1_type -2 176 27 1987 130 50 16 chr5 121466172 121466495 -78163655 + MER1B DNA MER1_type 6 339 0 1824 155 37 20 chr5 121466882 121467237 -78162913 - MLT1A1 LTR MaLR 0 365 5 686 181 170 11 chr5 121467975 121468163 -78161987 + MER7A DNA MER2_type 10 225 -121 22119 27 0 0 chr5 121468244 121471672 -78158478 + L1PA2 LINE L1 2728 6155 0 213 132 0 0 chr5 121472776 121472814 -78157336 + (TG)n Simple_repeat Simple_repeat 1 38 0 295 300 75 0 chr5 121474358 121474478 -78155672 - Charlie8 DNA MER1_type -2281 136 8 1115 232 146 32 chr5 121476041 121476451 -78153699 + MLT1K LTR MaLR 132 588 0 297 282 0 12 chr5 121477225 121477310 -78152840 + G-rich Low_complexity Low_complexity 3 86 0 1087 232 89 76 chr5 121477623 121478097 -78152053 - MLT1J LTR MaLR 0 511 32 758 230 128 20 chr5 121478395 121478787 -78151363 - L1MC5 LINE L1 -82 7879 7446 213 291 58 0 chr5 121478865 121478951 -78151199 + L2 LINE L2 2551 2641 -673 226 260 0 82 chr5 121480603 121480676 -78149474 - MIR3 SINE MIR -1 207 141 982 187 23 47 chr5 121481481 121481695 -78148455 + MER63A DNA MER1_type 1 209 -1 23 0 0 0 chr5 121481818 121481841 -78148309 + AT_rich Low_complexity Low_complexity 1 23 0 308 266 55 39 chr5 121482102 121482230 -78147920 + MIR SINE MIR 132 261 -1 21 0 0 0 chr5 121483242 121483263 -78146887 + AT_rich Low_complexity Low_complexity 1 21 0 267 266 0 0 chr5 121483796 121483875 -78146275 + (TA)n Simple_repeat Simple_repeat 1 79 0 10215 147 13 1 chr5 121484121 121485764 -78144386 + HUERS-P3 LTR ERV1 7253 8915 -4 1001 95 137 6 chr5 121485771 121485939 -78144211 + LTR9B LTR ERV1 5 194 -450 311 143 20 0 chr5 121485937 121485986 -78144164 + LTR9B LTR ERV1 131 180 -464 * 981 221 46 5 chr5 121486229 121486587 -78143563 + MER67C LTR ERV1 220 648 -62 2608 123 0 10 chr5 121486609 121487016 -78143134 + LTR9B LTR ERV1 170 572 -72 4739 103 20 3 chr5 121487136 121487853 -78142297 + L1PA16 LINE L1 5452 6180 0 21 0 0 0 chr5 121488081 121488102 -78142048 + AT_rich Low_complexity Low_complexity 1 21 0 1308 228 53 72 chr5 121488119 121488632 -78141518 - L1MDa LINE L1 -3008 3532 3030 2165 179 68 31 chr5 121488636 121489374 -78140776 - L1MDa LINE L1 -3670 2870 2109 514 171 31 23 chr5 121489383 121489512 -78140638 - L1MA4 LINE L1 -2 6298 6169 4725 219 109 16 chr5 121489517 121489714 -78140436 - L1MDa LINE L1 -5079 1461 1284 2293 88 7 0 chr5 121489714 121490010 -78140140 - AluSp SINE Alu -13 300 3 4725 219 109 16 chr5 121490010 121491149 -78139001 - L1MDa LINE L1 -5256 1284 1 183 80 0 0 chr5 121491618 121491643 -78138507 + (CATATA)n Simple_repeat Simple_repeat 2 26 0 622 271 166 0 chr5 121492371 121492570 -78137580 + MIR SINE MIR 11 242 -20 617 272 27 38 chr5 121494260 121494444 -78135706 + MER5A DNA MER1_type 1 182 -7 446 301 171 10 chr5 121495022 121495221 -78134929 - MIR SINE MIR -6 256 26 1592 176 69 23 chr5 121495795 121496142 -78134008 - MLT1A1 LTR MaLR -2 363 1 815 227 19 60 chr5 121496144 121496413 -78133737 + LTR40b LTR ERVL 205 462 0 390 274 26 59 chr5 121496447 121496600 -78133550 - MIR SINE MIR -5 257 110 259 244 35 23 chr5 121497508 121497594 -78132556 + MLT1K LTR MaLR 485 571 -17 187 317 12 24 chr5 121497599 121497681 -78132469 - MIR SINE MIR -145 117 37 2339 137 7 7 chr5 121498351 121498777 -78131373 - Tigger2 DNA MER2_type -1 2717 3 286 289 21 21 chr5 121498811 121498908 -78131242 - MIR3 SINE MIR -3 205 109 282 266 21 0 chr5 121498936 121499030 -78131120 - MARNA DNA Mariner -208 378 283 1008 273 40 24 chr5 121499282 121499737 -78130413 - L1MCc LINE L1 -3301 3640 3179 495 202 58 46 chr5 121500357 121500440 -78129710 - LTR41 LTR ERVL -595 178 97 844 188 0 24 chr5 121500440 121500610 -78129540 + L1PA8 LINE L1 6005 6170 -2 495 202 58 46 chr5 121500610 121500699 -78129451 - LTR41 LTR ERVL -676 97 4 587 201 28 0 chr5 121500699 121500843 -78129307 - L1MCc LINE L1 -3778 3163 3016 262 266 42 58 chr5 121500855 121501096 -78129054 - L1MCc LINE L1 -4136 2986 2750 3238 190 26 55 chr5 121501107 121501835 -78128315 + MER44D DNA MER2_type 1 579 -26 933 146 0 0 chr5 121502011 121502141 -78128009 - AluSq/x SINE Alu -183 130 1 797 281 89 43 chr5 121502235 121503212 -78126938 - L1MCc LINE L1 -4614 2508 1280 1358 271 85 45 chr5 121503254 121503696 -78126454 - L2 LINE L2 -35 3278 2789 4169 173 36 60 chr5 121503696 121504689 -78125461 + LTR5 LTR ERVK 1 969 0 1358 271 85 45 chr5 121504689 121505013 -78125137 - L2 LINE L2 -524 2789 2479 330 224 92 0 chr5 121505023 121505121 -78125029 + MER69A DNA AcHobo 26 132 -45 218 311 41 25 chr5 121505172 121505294 -78124856 - L2 LINE L2 -823 2491 2368 1610 176 43 0 chr5 121505885 121506164 -78123986 + AluSq SINE Alu 5 295 -18 182 185 130 0 chr5 121506966 121507020 -78123130 + L2 LINE L2 2016 2076 -1238 386 231 8 0 chr5 121507855 121507901 -78122249 + (TA)n Simple_repeat Simple_repeat 1 45 -86 2456 132 54 10 chr5 121507901 121508311 -78121839 - MSTA LTR MaLR 0 428 1 386 231 8 0 chr5 121508311 121508394 -78121756 + (TA)n Simple_repeat Simple_repeat 45 131 0 32 43 0 0 chr5 121508424 121508470 -78121680 + AT_rich Low_complexity Low_complexity 1 46 0 417 39 0 0 chr5 121508505 121508556 -78121594 + (TG)n Simple_repeat Simple_repeat 2 52 0 611 140 56 0 chr5 121508670 121508777 -78121373 + MER105 DNA DNA 1 113 -91 409 122 19 112 chr5 121508777 121508884 -78121266 + MER105 DNA DNA 72 168 -36 202 167 95 0 chr5 121509434 121509476 -78120674 - L2 LINE L2 -3 3310 3265 2095 129 3 7 chr5 121509577 121509879 -78120271 - AluSx SINE Alu -11 301 1 968 285 68 74 chr5 121509951 121510410 -78119740 + MLT1K LTR MaLR 133 588 0 2505 134 34 46 chr5 121510670 121511236 -78118914 - MER4E LTR ERV1 -3 763 27 1863 216 37 61 chr5 121511236 121511746 -78118404 - LTR1B LTR ERV1 0 826 329 748 251 16 11 chr5 121511750 121511933 -78118217 - LTR1 LTR ERV1 -601 184 1 598 266 78 102 chr5 121512845 121513393 -78116757 + MLT1H LTR MaLR 14 548 -1 476 208 64 0 chr5 121513415 121513540 -78116610 - LTR67 LTR ERVL -25 532 400 1926 155 7 0 chr5 121513655 121513964 -78116186 + MER47A DNA MER2_type 56 366 0 2146 112 3 3 chr5 121514557 121514862 -78115288 + AluSq SINE Alu 9 313 0 226 239 80 34 chr5 121514956 121515044 -78115106 - MIR SINE MIR -63 145 54 5365 109 41 9 chr5 121515204 121515959 -78114191 + MER4E LTR ERV1 1 779 0 1032 119 9 110 chr5 121515978 121516196 -78113954 + MER4B LTR ERV1 1 196 -414 2455 48 0 0 chr5 121516209 121516501 -78113649 - LTR17 LTR ERV1 -454 326 35 2887 104 12 25 chr5 121516501 121516932 -78113218 + MER4B LTR ERV1 186 610 0 647 212 41 14 chr5 121517751 121517897 -78112253 - MER5A DNA MER1_type 0 189 40 2750 132 39 13 chr5 121517907 121518368 -78111782 - Tigger1 DNA MER2_type 0 2418 1946 786 69 0 10 chr5 121518365 121518467 -78111683 - Tigger1 DNA MER2_type -1046 1372 1272 * 3704 163 22 34 chr5 121518458 121519131 -78111019 - Tigger1 DNA MER2_type -1744 674 10 2212 116 0 3 chr5 121519544 121519838 -78110312 + AluSc SINE Alu 1 293 -16 685 258 55 109 chr5 121519884 121520426 -78109724 - L1MC5 LINE L1 -177 7784 7272 592 238 0 8 chr5 121520931 121521053 -78109097 - LTR28 LTR ERV1 0 1020 900 434 248 35 9 chr5 121521111 121521224 -78108926 - LTR28 LTR ERV1 -56 964 849 * 792 234 29 6 chr5 121521223 121521398 -78108752 - LTR28 LTR ERV1 -410 610 432 328 306 65 0 chr5 121521964 121522132 -78108018 + Charlie8 DNA MER1_type 106 1390 -1027 345 149 2 2 chr5 121522214 121522276 -78107874 - MLT2B2 LTR ERVL 0 515 336 200 214 18 0 chr5 121522276 121522332 -78107818 + (TA)n Simple_repeat Simple_repeat 1 57 0 684 216 180 0 chr5 121522354 121522521 -78107629 - MLT2C2 LTR ERVL -49 415 219 7444 25 1 2 chr5 121522521 121523347 -78106803 + L1PA2 LINE L1 5331 6155 0 216 111 0 0 chr5 121524451 121524487 -78105663 + (TG)n Simple_repeat Simple_repeat 1 36 0 28472 84 5 5 chr5 121525490 121529313 -78100837 + L1P LINE L1 12 3836 -2310 23541 42 4 36 chr5 121529420 121532737 -78097413 - L1P1 LINE L1 -573 5582 2378 238 216 0 0 chr5 121532912 121532963 -78097187 + T-rich Low_complexity Low_complexity 1 51 0 225 211 0 19 chr5 121532964 121533016 -78097134 + GA-rich Low_complexity Low_complexity 2 52 0 1294 245 178 28 chr5 121533901 121534411 -78095739 + MLT1K LTR MaLR 2 588 0 297 282 0 12 chr5 121535185 121535270 -78094880 + G-rich Low_complexity Low_complexity 3 86 0 1265 232 89 76 chr5 121535584 121536058 -78094092 - MLT1J LTR MaLR 0 511 32 898 217 142 14 chr5 121536356 121536716 -78093434 - L1MC5 LINE L1 -82 7879 7474 24 53 0 0 chr5 121536716 121536754 -78093396 + AT_rich Low_complexity Low_complexity 1 38 0 300 53 0 0 chr5 121537176 121537214 -78092936 + (T)n Simple_repeat Simple_repeat 1 38 0 4010 20 0 0 chr5 121537216 121537668 -78092482 - L1HS LINE L1 -2 6153 5702 3174 11 0 0 chr5 121537666 121538093 -78092057 + L1P1 LINE L1 5181 5607 -548 * 230 257 68 0 chr5 121538228 121538302 -78091848 + L2 LINE L2 2563 2641 -673 230 246 0 14 chr5 121538385 121538454 -78091696 - MARNA DNA Mariner -350 236 169 223 260 0 82 chr5 121539954 121540027 -78090123 - MIR3 SINE MIR -1 207 141 1074 187 23 47 chr5 121540829 121541043 -78089107 + MER63A DNA MER1_type 1 209 -1 23 0 0 0 chr5 121541166 121541189 -78088961 + AT_rich Low_complexity Low_complexity 1 23 0 303 281 47 31 chr5 121541450 121541578 -78088572 + MIR SINE MIR 132 261 -1 402 115 0 0 chr5 121542216 121542277 -78087873 + (TA)n Simple_repeat Simple_repeat 1 61 0 234 0 0 0 chr5 121542277 121542303 -78087847 + (CA)n Simple_repeat Simple_repeat 1 26 0 241 226 32 0 chr5 121542303 121542365 -78087785 - MIR SINE MIR -80 128 65 321 286 75 41 chr5 121542703 121542850 -78087300 - MIR3 SINE MIR -25 183 32 289 208 97 0 chr5 121543230 121543302 -78086848 - MARNA DNA Mariner -145 441 363 1867 141 106 29 chr5 121543590 121543938 -78086212 + THE1C LTR MaLR 1 375 0 703 266 23 0 chr5 121544333 121544506 -78085644 + MER69A DNA AcHobo 1 177 0 222 118 0 0 chr5 121544678 121544712 -78085438 + (CA)n Simple_repeat Simple_repeat 2 35 0 461 170 182 44 chr5 121547523 121547682 -78082468 - L1ME4a LINE L1 -95 6026 5846 307 331 74 14 chr5 121548005 121548153 -78081997 + LTR16C LTR ERVL 170 326 -165 500 209 11 126 chr5 121549758 121549949 -78080201 - MLT1K LTR MaLR -8 580 412 411 276 147 49 chr5 121550747 121550758 -78079392 + MIR3 SINE MIR 19 28 -180 1531 186 11 0 chr5 121550758 121551022 -78079128 + AluJo SINE Alu 36 302 -10 411 276 147 49 chr5 121551022 121551173 -78078977 + MIR3 SINE MIR 28 197 -11 809 202 17 28 chr5 121551188 121551366 -78078784 + MER5B DNA MER1_type 2 177 -1 328 306 65 0 chr5 121552731 121552899 -78077251 + Charlie8 DNA MER1_type 106 1379 -1038 345 149 2 2 chr5 121552981 121553043 -78077107 - MLT2B2 LTR ERVL 0 515 336 200 214 18 0 chr5 121553043 121553099 -78077051 + (TA)n Simple_repeat Simple_repeat 2 58 0 802 169 108 154 chr5 121553121 121553288 -78076862 - MLT2C2 LTR ERVL -49 415 242 7419 29 1 1 chr5 121553288 121554109 -78076041 + L1PA3 LINE L1 5331 6151 -4 198 0 0 0 chr5 121554116 121554138 -78076012 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 802 169 108 154 chr5 121554138 121554241 -78075909 - MLT2C2 LTR ERVL -228 236 150 1484 211 41 21 chr5 121554246 121554641 -78075509 - MER54B LTR ERVL 0 793 484 637 105 36 2 chr5 121554732 121554955 -78075195 + AluSx SINE Alu 1 285 -25 344 247 0 21 chr5 121555154 121555251 -78074899 - MLT2C2 LTR ERVL -321 143 49 5077 241 47 8 chr5 121555251 121556710 -78073440 - L1M1 LINE L1 -4171 3038 1731 1368 293 69 59 chr5 121556763 121557500 -78072650 - L1M1 LINE L1 -6133 1076 200 23631 80 6 20 chr5 121557804 121561420 -78068730 + L1PA5 LINE L1 4 3566 -2580 820 48 0 0 chr5 121561413 121561516 -78068634 + L1P LINE L1 4154 4256 -1890 * 14402 54 2 3 chr5 121561516 121564112 -78066038 + L1PA5 LINE L1 3562 6154 0 3912 194 30 49 chr5 121564283 121565270 -78064880 + LTR5 LTR ERVK 1 969 0 203 161 0 0 chr5 121565293 121565324 -78064826 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 819 236 83 43 chr5 121566033 121566360 -78063790 + MER102b DNA MER1_type 2 341 0 315 0 0 0 chr5 121567420 121567455 -78062695 + (TG)n Simple_repeat Simple_repeat 1 35 0 1263 271 63 10 chr5 121570060 121570566 -78059584 - L1MC4a LINE L1 -1763 6045 5513 229 281 174 8 chr5 121570899 121571020 -78059130 + MIR3 SINE MIR 3 143 -65 583 233 104 0 chr5 121572262 121572425 -78057725 - MIR SINE MIR -6 256 77 272 252 36 18 chr5 121573725 121573836 -78056314 + MLT1L LTR MaLR 188 300 -315 247 312 118 16 chr5 121573872 121574058 -78056092 - MLT1K LTR MaLR -62 526 322 1402 193 20 3 chr5 121574083 121574378 -78055772 + MSTB LTR MaLR 1 300 -126 961 312 137 22 chr5 121574658 121575251 -78054899 - L2 LINE L2 -506 2808 2148 323 272 105 113 chr5 121575256 121575638 -78054512 + L2 LINE L2 2842 3220 -52 388 281 115 36 chr5 121576653 121576845 -78053305 + MIR SINE MIR 47 253 -9 459 123 0 0 chr5 121576847 121576920 -78053230 - MER116 DNA Mariner -5 75 3 671 271 85 0 chr5 121577132 121577331 -78052819 + MIR SINE MIR 1 216 -46 252 267 63 77 chr5 121577975 121578260 -78051890 + HAL1 LINE L1 91 371 -2136 3717 125 16 26 chr5 121578460 121579107 -78051043 + L1MA4 LINE L1 5344 5983 -317 371 21 0 0 chr5 121579199 121579247 -78050903 + L1PA3 LINE L1 6105 6152 -3 436 161 0 0 chr5 121579304 121579385 -78050765 + AluJ/FRAM SINE Alu 232 312 0 454 319 12 16 chr5 121579576 121579833 -78050317 + HAL1 LINE L1 1449 1704 -803 826 215 6 0 chr5 121580190 121580367 -78049783 + MER5B DNA MER1_type 1 178 0 527 315 129 56 chr5 121580409 121580891 -78049259 + L1MC4a LINE L1 610 1126 -5079 680 232 26 0 chr5 121580933 121581084 -78049066 - MER58A DNA MER1_type -28 196 42 250 258 16 23 chr5 121581184 121581312 -78048838 + L1MC4a LINE L1 1269 1395 -5001 5247 116 55 0 chr5 121581425 121582544 -78047606 + L1PA16 LINE L1 5002 6166 0 379 339 34 4 chr5 121582578 121582814 -78047336 + L1MC4a LINE L1 1578 1820 -4576 312 256 63 79 chr5 121582956 121583335 -78046815 + L1MC4a LINE L1 2030 2402 -3994 286 238 0 12 chr5 121583353 121583433 -78046717 + HAL1 LINE L1 1692 1770 -737 546 285 80 44 chr5 121583591 121584068 -78046082 + HAL1 LINE L1 2014 2507 0 343 303 94 53 chr5 121584226 121584667 -78045483 + L1MC4a LINE L1 4844 5150 -1065 396 40 0 0 chr5 121585236 121585286 -78044864 + (A)n Simple_repeat Simple_repeat 1 50 0 1917 147 7 0 chr5 121586246 121586531 -78043619 + AluSx SINE Alu 1 287 -25 432 227 136 65 chr5 121587926 121588080 -78042070 + MIR3 SINE MIR 32 196 -12 368 220 78 73 chr5 121588091 121588282 -78041868 + MIR SINE MIR 65 256 -6 466 211 32 0 chr5 121589260 121589383 -78040767 - L1ME2 LINE L1 -10 6154 6028 238 319 106 26 chr5 121589525 121589638 -78040512 - MIR3 SINE MIR -33 175 54 218 317 61 0 chr5 121589637 121589719 -78040431 - MIR SINE MIR -6 256 170 * 260 258 15 15 chr5 121589716 121589782 -78040368 + MIR SINE MIR 157 222 -40 1181 248 46 44 chr5 121590096 121590571 -78039579 - MLT1K LTR MaLR 0 476 1 215 309 15 0 chr5 121590748 121590816 -78039334 - MER5A DNA MER1_type -7 182 114 * 262 224 26 13 chr5 121590765 121590841 -78039309 + MER5A DNA MER1_type 36 112 -77 766 175 70 147 chr5 121590848 121591162 -78038988 - MER21B LTR ERV1 -553 310 21 291 319 88 9 chr5 121591200 121591313 -78038837 - MIR3 SINE MIR -33 175 54 198 0 0 0 chr5 121592559 121592581 -78037569 + (A)n Simple_repeat Simple_repeat 1 22 0 336 288 168 0 chr5 121592585 121592710 -78037440 + MIR3 SINE MIR 52 197 -11 771 279 160 17 chr5 121592725 121593195 -78036955 - L3 LINE CR1 -49 1528 992 182 321 18 0 chr5 121593961 121594017 -78036133 - MER5A DNA MER1_type -124 65 9 5759 104 23 0 chr5 121594703 121595061 -78035089 - L1PB1 LINE L1 0 6151 5803 237 33 0 0 chr5 121595061 121595091 -78035059 + (TG)n Simple_repeat Simple_repeat 2 31 0 5759 104 23 0 chr5 121595091 121595967 -78034183 - L1PB1 LINE L1 -348 5803 4913 476 99 12 0 chr5 121597314 121597395 -78032755 - L1MB4 LINE L1 -6 6174 6093 299 358 80 0 chr5 121597676 121597813 -78032337 + MIR SINE MIR 53 200 -62 190 191 21 21 chr5 121597934 121597981 -78032169 + L2 LINE L2 3266 3312 -1 367 283 70 41 chr5 121598165 121598479 -78031671 + L1ME4a LINE L1 5546 5868 -253 5993 135 66 10 chr5 121598530 121599027 -78031123 + Tigger3b DNA MER2_type 3 470 -2558 378 0 0 0 chr5 121599027 121599069 -78031081 + (TG)n Simple_repeat Simple_repeat 2 43 0 5993 135 66 10 chr5 121599069 121599686 -78030464 + Tigger3b DNA MER2_type 470 1180 -51 244 188 12 12 chr5 121600617 121600697 -78029453 + T-rich Low_complexity Low_complexity 1 80 0 4387 156 43 5 chr5 121600698 121601556 -78028594 - L1 LINE L1 -845 5301 4411 2272 102 0 3 chr5 121601556 121601849 -78028301 - AluSx SINE Alu -10 302 11 232 315 62 34 chr5 121601862 121602008 -78028142 - MLT1K LTR MaLR -304 284 135 186 313 107 27 chr5 121602297 121602447 -78027703 - L2 LINE L2 -225 3047 2886 281 228 142 94 chr5 121603082 121603209 -78026941 + MIR SINE MIR 20 152 -110 789 268 41 9 chr5 121603244 121603464 -78026686 + MIR SINE MIR 35 261 -1 1404 241 48 19 chr5 121603492 121603911 -78026239 - MLT1L LTR MaLR -4 611 181 313 238 168 30 chr5 121604126 121604227 -78025923 + MIR SINE MIR 22 136 -126 371 214 153 0 chr5 121604542 121604640 -78025510 + MIR SINE MIR 88 200 -62 24 0 0 0 chr5 121605156 121605180 -78024970 + AT_rich Low_complexity Low_complexity 1 24 0 294 295 132 31 chr5 121605282 121605411 -78024739 - L2 LINE L2 -9 3263 3122 362 224 84 14 chr5 121606362 121606505 -78023645 - LTR67 LTR ERVL 0 557 405 227 241 19 0 chr5 121606539 121606593 -78023557 - MER115 DNA AcHobo 0 693 639 371 237 0 82 chr5 121606791 121606888 -78023262 - MER115 DNA AcHobo -474 219 131 687 129 129 0 chr5 121607298 121607414 -78022736 - FLAM_C SINE Alu 0 133 3 1700 167 98 0 chr5 121607694 121608011 -78022139 + MER7A DNA MER2_type 1 346 0 973 213 122 60 chr5 121608257 121608609 -78021541 - MLT1A2 LTR MaLR 0 374 1 422 252 19 0 chr5 121610317 121610424 -78019726 - MIR SINE MIR -29 233 125 216 158 0 0 chr5 121611372 121611410 -78018740 + A-rich Low_complexity Low_complexity 1 38 0 696 311 7 47 chr5 121612153 121612430 -78017720 + L2 LINE L2 3048 3313 0 839 239 78 5 chr5 121612541 121612746 -78017404 - MER58A DNA MER1_type -3 221 2 232 292 67 17 chr5 121613088 121613208 -78016942 - LTR67 LTR ERVL -5 552 427 2159 148 12 3 chr5 121614915 121615259 -78014891 - MLT1A1 LTR MaLR 0 365 19 6039 134 28 16 chr5 121615442 121616906 -78013244 - L1MA6 LINE L1 -6 6294 4808 252 255 330 0 chr5 121617833 121617927 -78012223 + L3 LINE CR1 1429 1553 -24 222 37 0 0 chr5 121617968 121617995 -78012155 + (T)n Simple_repeat Simple_repeat 1 27 0 1412 185 10 102 chr5 121618077 121618471 -78011679 + MLT2D LTR ERVL 1 358 -56 703 231 108 79 chr5 121618634 121618950 -78011200 + L2 LINE L2 2821 3145 -168 389 191 54 68 chr5 121620458 121620605 -78009545 - LTR67 LTR ERVL 0 557 413 2018 157 83 37 chr5 121621428 121621835 -78008315 - MSTB LTR MaLR 0 426 1 28 29 0 0 chr5 121621945 121621980 -78008170 + AT_rich Low_complexity Low_complexity 1 35 0 710 301 138 14 chr5 121622145 121622896 -78007254 + L2 LINE L2 2462 3309 -4 388 315 91 17 chr5 121623355 121623587 -78006563 + MIR SINE MIR 8 256 -6 1753 193 0 3 chr5 121624290 121624591 -78005559 - AluJo SINE Alu -12 300 1 2297 67 0 41 chr5 121624741 121625056 -78005094 + AluY SINE Alu 1 302 -9 456 299 104 0 chr5 121625057 121625211 -78004939 - MIR SINE MIR -30 232 63 189 221 0 0 chr5 121625941 121626009 -78004141 + (TA)n Simple_repeat Simple_repeat 2 69 0 271 354 67 46 chr5 121626693 121627232 -78002918 + L1MEd LINE L1 41 590 -5529 381 274 97 35 chr5 121627583 121628011 -78002139 + L1MEd LINE L1 998 1552 -938 1651 194 63 65 chr5 121630238 121630697 -77999453 - MLT1C LTR MaLR -4 463 6 195 306 204 0 chr5 121631789 121631897 -77998253 + L2 LINE L2 3136 3265 -7 29 53 0 40 chr5 121632169 121632245 -77997905 + AT_rich Low_complexity Low_complexity 1 73 0 1333 133 113 0 chr5 121632376 121632616 -77997534 + AluJo SINE Alu 42 308 -4 3463 208 178 74 chr5 121632857 121633620 -77996530 + L1MC3 LINE L1 6255 6937 -848 347 207 37 12 chr5 121633620 121633702 -77996448 + MLT1F1 LTR MaLR 41 124 -443 3463 208 178 74 chr5 121633702 121634222 -77995928 + L1MC3 LINE L1 6937 7761 -24 26 64 0 0 chr5 121634286 121634333 -77995817 + AT_rich Low_complexity Low_complexity 1 47 0 519 175 0 0 chr5 121634383 121634463 -77995687 + Tigger3b DNA MER2_type 23 102 -1129 * 3942 147 123 22 chr5 121634462 121635326 -77994824 + Tigger3b DNA MER2_type 275 1225 -6 381 167 0 0 chr5 121639546 121639624 -77990526 + GA-rich Low_complexity Low_complexity 1 78 0 229 214 86 14 chr5 121642589 121642644 -77987506 + MIR3 SINE MIR 95 157 -51 900 144 0 0 chr5 121642644 121642776 -77987374 - FLAM_C SINE Alu -1 132 1 229 214 86 14 chr5 121642776 121642790 -77987360 + MIR3 SINE MIR 157 169 -39 1876 215 67 54 chr5 121643307 121643860 -77986290 + MER68 LTR ERV1 3 562 0 2401 100 0 0 chr5 121644336 121644637 -77985513 + AluSc SINE Alu 1 301 -8 645 253 148 67 chr5 121645520 121646692 -77983458 + L1MEc LINE L1 1056 2323 -4073 1255 272 73 20 chr5 121646698 121647437 -77982713 + L1MEc LINE L1 2243 3020 -3195 1215 223 72 9 chr5 121648153 121648471 -77981679 - MER58B DNA MER1_type 0 341 4 196 342 118 13 chr5 121648574 121648726 -77981424 + L2 LINE L2 2902 3069 -203 284 244 122 18 chr5 121649471 121649665 -77980485 + L1ME1 LINE L1 5944 6165 -1 188 281 53 0 chr5 121651368 121651425 -77978725 - MER5A DNA MER1_type -2 187 128 3700 161 78 57 chr5 121651878 121652854 -77977296 + L1MB8 LINE L1 5181 6177 -1 26 0 0 0 chr5 121652857 121652883 -77977267 + AT_rich Low_complexity Low_complexity 1 26 0 231 307 80 12 chr5 121654656 121654819 -77975331 + L1MC5 LINE L1 7744 7917 -44 390 311 34 68 chr5 121656268 121656445 -77973705 + L2 LINE L2 3102 3272 0 254 264 0 0 chr5 121657685 121657757 -77972393 + L1ME LINE L1 5691 5762 -400 856 263 71 27 chr5 121658077 121658374 -77971776 + L1MC4a LINE L1 5552 5861 -1947 382 291 81 104 chr5 121660867 121661461 -77968689 + L1M2 LINE L1 799 1378 -5471 215 170 38 0 chr5 121661490 121661543 -77968607 + (CGGGG)n Simple_repeat Simple_repeat 5 59 0 1750 137 61 47 chr5 121661737 121662079 -77968071 - THE1B LTR MaLR 0 364 18 1207 176 137 19 chr5 121663225 121663333 -77966817 + AluJb SINE Alu 9 103 -209 291 114 0 0 chr5 121663333 121663377 -77966773 + (CA)n Simple_repeat Simple_repeat 1 44 0 1207 176 137 19 chr5 121663377 121663530 -77966620 + AluJb SINE Alu 103 301 -11 365 264 118 28 chr5 121663536 121663714 -77966436 + Charlie2 DNA MER1_type 90 283 -2579 1609 179 169 104 chr5 121663761 121663935 -77966215 + Charlie2 DNA MER1_type 1859 2020 -842 1796 168 3 13 chr5 121663935 121664233 -77965917 - AluJb SINE Alu -17 295 1 1609 179 169 104 chr5 121664233 121664583 -77965567 + Charlie2 DNA MER1_type 2020 2346 -516 2164 105 0 10 chr5 121664583 121664879 -77965271 - AluSq SINE Alu -20 293 1 1609 179 169 104 chr5 121664879 121664935 -77965215 + Charlie2 DNA MER1_type 2346 2397 -465 1960 170 0 0 chr5 121664935 121665235 -77964915 + AluJb SINE Alu 1 300 -12 1609 179 169 104 chr5 121665235 121665590 -77964560 + Charlie2 DNA MER1_type 2397 2857 -5 230 73 24 0 chr5 121665788 121665829 -77964321 + (GTTTG)n Simple_repeat Simple_repeat 3 44 0 336 346 104 29 chr5 121666208 121666448 -77963702 - L1ME LINE L1 -407 5714 5457 1797 172 0 0 chr5 121666930 121667220 -77962930 + AluJb SINE Alu 22 311 -1 288 376 153 16 chr5 121667229 121667543 -77962607 - L2 LINE L2 -12 3260 2904 247 294 46 55 chr5 121669831 121669940 -77960210 - L2 LINE L2 -2 3311 3204 228 322 92 66 chr5 121669980 121670207 -77959943 - L2 LINE L2 -223 3049 2817 1550 165 46 0 chr5 121670804 121671065 -77959085 + AluJb SINE Alu 40 312 0 346 350 7 15 chr5 121671881 121672018 -77958132 + L2 LINE L2 3137 3272 0 473 271 110 41 chr5 121672363 121672581 -77957569 - MIR SINE MIR 0 262 30 300 172 16 0 chr5 121673326 121673390 -77956760 + MLT1K LTR MaLR 522 586 -2 267 390 41 48 chr5 121673455 121673745 -77956405 - L2 LINE L2 -181 3091 2804 234 355 91 32 chr5 121673876 121674217 -77955933 + L2 LINE L2 2593 2953 -361 261 0 0 0 chr5 121674559 121674588 -77955562 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 275 257 71 0 chr5 121674853 121674923 -77955227 - L2 LINE L2 -77 3195 3121 543 284 26 26 chr5 121674976 121675170 -77954980 + MIR SINE MIR 67 260 -2 1113 128 0 10 chr5 121675702 121675906 -77954244 - L1MA4 LINE L1 -6 6294 6093 678 272 64 61 chr5 121676623 121676935 -77953215 + MLT1E2-int LTR MaLR 961 1273 -98 1394 209 158 97 chr5 121677060 121677676 -77952474 + MLT1E2 LTR MaLR 2 626 0 2162 136 36 25 chr5 121678157 121678517 -77951633 - THE1B LTR MaLR 0 364 1 751 257 57 6 chr5 121678638 121678813 -77951337 + MER5A DNA MER1_type 2 185 -4 24 32 0 0 chr5 121679313 121679344 -77950806 + AT_rich Low_complexity Low_complexity 1 31 0 26 30 0 0 chr5 121679375 121679408 -77950742 + AT_rich Low_complexity Low_complexity 1 33 0 1598 274 31 17 chr5 121679803 121680346 -77949804 + MER90 LTR ERV1 4 554 -21 23 0 0 0 chr5 121680356 121680379 -77949771 + AT_rich Low_complexity Low_complexity 1 23 0 2035 186 64 20 chr5 121680621 121680881 -77949269 + MSTB LTR MaLR 1 287 -139 2224 121 3 0 chr5 121680881 121681178 -77948972 + AluSg SINE Alu 1 298 -12 2035 186 64 20 chr5 121681178 121681325 -77948825 + MSTB LTR MaLR 287 426 0 9866 157 13 7 chr5 121681325 121682965 -77947185 + MSTB-int LTR MaLR 1 1651 0 1264 189 186 13 chr5 121683037 121683355 -77946795 + MSTA LTR MaLR 39 411 -17 251 275 14 0 chr5 121683434 121683503 -77946647 - MIR SINE MIR -15 247 178 277 234 234 7 chr5 121683523 121683664 -77946486 - MLT1L LTR MaLR -28 587 415 382 299 51 45 chr5 121683957 121684114 -77946036 - MIR SINE MIR -85 177 20 372 252 58 10 chr5 121684474 121684577 -77945573 + L2 LINE L2 3201 3308 -5 2314 81 10 0 chr5 121684740 121685035 -77945115 - AluSp SINE Alu -15 298 1 26 30 0 0 chr5 121685041 121685074 -77945076 + AT_rich Low_complexity Low_complexity 1 33 0 485 260 137 22 chr5 121686058 121686512 -77943638 - L1ME4a LINE L1 -28 6093 5588 31 0 0 0 chr5 121686826 121686857 -77943293 + AT_rich Low_complexity Low_complexity 1 31 0 1638 249 59 47 chr5 121686982 121687716 -77942434 + L1MC4a LINE L1 5122 5403 -743 23 33 0 0 chr5 121687869 121687899 -77942251 + AT_rich Low_complexity Low_complexity 1 30 0 553 304 62 5 chr5 121688699 121688893 -77941257 - MIR SINE MIR -43 219 15 203 307 204 15 chr5 121689514 121689651 -77940499 - MIR3 SINE MIR -15 193 31 208 274 60 48 chr5 121689801 121689885 -77940265 + MIR SINE MIR 19 103 -159 604 320 30 25 chr5 121690224 121690621 -77939529 - L1ME3A LINE L1 -222 5948 5550 707 129 0 16 chr5 121690654 121690778 -77939372 - L1MB8 LINE L1 -11 6167 6046 2234 120 0 0 chr5 121691270 121691570 -77938580 - AluSg SINE Alu -10 300 1 495 0 0 0 chr5 121691692 121691747 -77938403 + (TA)n Simple_repeat Simple_repeat 2 56 0 541 314 47 0 chr5 121693441 121693610 -77936540 - MIR SINE MIR -63 199 23 236 350 39 0 chr5 121693665 121693768 -77936382 + MER97a DNA MER1_type? 76 182 -712 255 163 0 0 chr5 121693868 121693917 -77936233 + MLT1L LTR MaLR 411 459 -156 248 211 0 0 chr5 121693945 121693997 -77936153 - MER46A DNA MER2_type -86 150 99 * 464 95 9 0 chr5 121693964 121694034 -77936116 + Tigger4(Zombi) DNA MER2_type 265 2731 0 2294 118 45 5 chr5 121694034 121694408 -77935742 - L1MB4 LINE L1 -5 6175 5787 241 229 0 24 chr5 121694431 121694514 -77935636 + MLT1L LTR MaLR 500 580 -35 2741 0 3 3 chr5 121694804 121695106 -77935044 - AluYa5 SINE Alu -9 302 1 407 238 151 24 chr5 121695911 121696037 -77934113 - MIR3 SINE MIR -31 177 36 1737 148 6 63 chr5 121698731 121699081 -77931069 - AluJb SINE Alu 0 312 1 560 266 100 0 chr5 121700915 121701156 -77928994 - L1MC4a LINE L1 -1919 5889 5625 715 264 118 14 chr5 121701632 121701852 -77928298 + MIR SINE MIR 20 262 0 404 165 25 13 chr5 121701915 121701994 -77928156 + MER5C DNA MER1_type 3 82 -242 1146 258 64 123 chr5 121702338 121703215 -77926935 - L2 LINE L2 -548 2766 1942 406 368 80 82 chr5 121703596 121704567 -77925583 - L2 LINE L2 -349 2965 1997 276 333 40 11 chr5 121705426 121705603 -77924547 + LTR67 LTR ERVL 376 557 0 938 196 5 5 chr5 121705619 121705803 -77924347 + MER58A DNA MER1_type 40 223 -1 447 308 86 20 chr5 121706225 121706423 -77923727 + L2 LINE L2 3103 3313 0 1116 211 156 8 chr5 121706612 121706868 -77923282 + AluJo SINE Alu 1 294 -8 294 270 27 18 chr5 121707534 121707645 -77922505 + L1ME LINE L1 140 251 -5954 275 259 12 12 chr5 121707910 121707991 -77922159 + L1ME LINE L1 637 717 -5488 432 279 42 38 chr5 121708147 121708623 -77921527 + L1ME LINE L1 1031 1508 -4888 1038 266 125 22 chr5 121708708 121708893 -77921257 + L1ME LINE L1 3342 3507 -2708 1073 108 32 0 chr5 121708893 121709051 -77921099 - L1PA11 LINE L1 -2 6172 6010 1038 266 125 22 chr5 121709051 121709406 -77920744 + L1ME LINE L1 3507 3961 -2254 2023 133 3 13 chr5 121709406 121709706 -77920444 + AluSx SINE Alu 1 297 -15 1038 266 125 22 chr5 121709706 121709804 -77920346 + L1ME LINE L1 3961 4047 -2168 1123 265 52 27 chr5 121709821 121710422 -77919728 + L1ME LINE L1 4304 4919 -1296 21 57 0 0 chr5 121710727 121710762 -77919388 + AT_rich Low_complexity Low_complexity 1 35 0 182 235 0 0 chr5 121711680 121711714 -77918436 + MIR SINE MIR 214 247 -15 258 32 0 0 chr5 121711749 121711780 -77918370 + (CAAT)n Simple_repeat Simple_repeat 3 33 0 743 319 88 17 chr5 121712549 121713028 -77917122 + L2 LINE L2 2378 2890 -424 2278 161 11 41 chr5 121713037 121713184 -77916966 + MER65A LTR ERV1 1 151 -294 2309 60 7 7 chr5 121713184 121713467 -77916683 + AluY SINE Alu 1 306 0 208 0 0 0 chr5 121713467 121713490 -77916660 + (CAAA)n Simple_repeat Simple_repeat 2 164 0 2278 161 11 41 chr5 121713490 121713800 -77916350 + MER65A LTR ERV1 151 445 0 402 218 88 106 chr5 121713966 121714212 -77915938 + L1ME4a LINE L1 5743 5985 -136 1268 167 8 68 chr5 121714212 121714464 -77915686 + MER8 DNA MER2_type 3 239 0 402 218 88 106 chr5 121714464 121714501 -77915649 + L1ME4a LINE L1 5985 6021 -100 230 241 0 0 chr5 121714501 121714555 -77915595 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 25 65 0 0 chr5 121715231 121715277 -77914873 + AT_rich Low_complexity Low_complexity 1 46 0 820 196 0 0 chr5 121715494 121715627 -77914523 + FLAM_A SINE Alu 1 133 0 2115 262 108 70 chr5 121716220 121717461 -77912689 - L2 LINE L2 -358 2956 1669 668 97 0 65 chr5 121717706 121717830 -77912320 + L1PA7 LINE L1 6036 6151 -3 201 310 138 26 chr5 121717830 121717946 -77912204 + MER5A DNA MER1_type 60 188 -1 29 47 0 0 chr5 121718104 121718147 -77912003 + AT_rich Low_complexity Low_complexity 1 43 0 366 271 93 117 chr5 121718477 121718972 -77911178 + L1M4 LINE L1 633 1115 -5734 198 0 0 0 chr5 121719129 121719151 -77910999 + (T)n Simple_repeat Simple_repeat 1 22 0 206 299 90 72 chr5 121719870 121720088 -77910062 + L2 LINE L2 1842 2068 -1246 2265 41 0 4 chr5 121720088 121720356 -77909794 + AluY SINE Alu 39 305 -6 206 299 90 72 chr5 121720356 121720415 -77909735 + L2 LINE L2 2068 2124 -1190 372 244 35 23 chr5 121720718 121720804 -77909346 - L2 LINE L2 -50 3222 3136 2489 327 60 25 chr5 121720847 121722324 -77907826 + ERVL LTR ERVL 3775 5302 -462 1424 258 55 6 chr5 121722363 121722909 -77907241 + L1M4 LINE L1 3889 4461 -2387 689 280 97 37 chr5 121722907 121724447 -77905703 + L1ME3A LINE L1 1300 3052 -3163 * 1856 226 165 5 chr5 121724447 121725010 -77905140 + MLT1E1 LTR MaLR 2 654 0 573 248 115 40 chr5 121725127 121725623 -77904527 + L1ME3A LINE L1 3201 3733 -2482 1236 245 199 26 chr5 121725626 121726820 -77903330 + L1ME3A LINE L1 3811 5210 -1005 753 264 158 16 chr5 121726896 121727403 -77902747 + L1ME3A LINE L1 5336 5922 -317 29 47 0 0 chr5 121727443 121727486 -77902664 + AT_rich Low_complexity Low_complexity 1 43 0 294 240 62 93 chr5 121727530 121727659 -77902491 + MER5C DNA MER1_type 1 125 -199 182 200 125 0 chr5 121728227 121728267 -77901883 + L3 LINE CR1 427 471 -1106 2234 108 0 0 chr5 121728680 121728977 -77901173 - AluSx SINE Alu -15 297 1 255 293 221 14 chr5 121729141 121729349 -77900801 - MIR SINE MIR 0 262 12 977 230 81 13 chr5 121729416 121729651 -77900499 + MIR SINE MIR 2 252 -10 23 0 0 0 chr5 121730143 121730166 -77899984 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 121731922 121731943 -77898207 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 121733796 121733824 -77896326 + AT_rich Low_complexity Low_complexity 1 28 0 2337 94 0 0 chr5 121734353 121734640 -77895510 - AluSg SINE Alu -23 287 1 553 195 154 33 chr5 121734671 121734943 -77895207 - L1MC5 LINE L1 -48 7913 7609 488 226 144 0 chr5 121735010 121735191 -77894959 - L1MC5 LINE L1 -443 7518 7312 305 260 8 63 chr5 121735197 121735324 -77894826 - L1MC4 LINE L1 -568 7474 7355 228 234 9 72 chr5 121735346 121735457 -77894693 - L1MC5 LINE L1 -728 7233 7130 1240 138 14 5 chr5 121736049 121736259 -77893891 - Tigger4(Zombi) DNA MER2_type 0 2731 2520 419 172 0 35 chr5 121736254 121736341 -77893809 - Tigger4(Zombi) DNA MER2_type -2619 112 29 * 437 279 146 26 chr5 121737421 121737647 -77892503 - MIR SINE MIR -8 254 2 628 199 7 35 chr5 121739028 121739169 -77890981 - MER20 DNA MER1_type 0 219 83 199 264 69 76 chr5 121740173 121740317 -77889833 + L2 LINE L2 2911 3053 -219 351 292 196 14 chr5 121740437 121740656 -77889494 + MIR SINE MIR 3 261 -1 184 291 25 76 chr5 121740642 121740721 -77889429 + L2 LINE L2 3190 3264 -8 * 703 309 91 33 chr5 121740809 121741269 -77888881 + L2 LINE L2 2447 2933 -381 230 264 0 0 chr5 121741443 121741496 -77888654 + L2 LINE L2 3207 3259 -54 324 327 48 0 chr5 121741631 121741735 -77888415 - L3 LINE CR1 -56 1521 1413 688 69 0 10 chr5 121742835 121742936 -77887214 - AluSg/x SINE Alu 0 312 213 700 274 76 14 chr5 121743080 121743303 -77886847 + MIR SINE MIR 20 256 -6 366 280 16 21 chr5 121743303 121743496 -77886654 + L1ME3A LINE L1 5423 5614 -556 249 33 0 0 chr5 121743543 121743573 -77886577 + (TA)n Simple_repeat Simple_repeat 1 30 0 231 246 16 16 chr5 121743641 121743702 -77886448 + Charlie1 DNA MER1_type 1 61 -2700 660 181 127 15 chr5 121743710 121743915 -77886235 + Charlie1 DNA MER1_type 2364 2591 -170 655 182 11 74 chr5 121743909 121744084 -77886066 + MLT1C LTR MaLR 6 169 -298 1254 100 22 0 chr5 121744084 121744264 -77885886 + THE1B LTR MaLR 1 184 -180 573 111 0 0 chr5 121744252 121744333 -77885817 + THE1B LTR MaLR 42 122 -242 * 1222 156 14 0 chr5 121744464 121744676 -77885474 + THE1B LTR MaLR 150 364 0 906 218 12 97 chr5 121744676 121745007 -77885143 + MLT1C LTR MaLR 165 467 0 240 131 16 0 chr5 121745007 121745067 -77885083 + Charlie1 DNA MER1_type 2578 2638 -123 27 49 0 0 chr5 121745089 121745130 -77885020 + AT_rich Low_complexity Low_complexity 1 41 0 1889 190 0 6 chr5 121745144 121745455 -77884695 + AluJo SINE Alu 1 309 -3 543 263 69 95 chr5 121745492 121745998 -77884152 + L1ME3A LINE L1 5655 6147 -23 1172 219 69 92 chr5 121746041 121746488 -77883662 - MLT1H LTR MaLR -6 543 107 898 244 75 50 chr5 121746492 121746852 -77883298 - MLT2F LTR ERVL 0 663 295 234 232 0 29 chr5 121746917 121746986 -77883164 - MLT2F LTR ERVL -594 69 3 370 301 90 5 chr5 121747363 121747544 -77882606 + MIR SINE MIR 44 242 -20 355 239 0 0 chr5 121748093 121748164 -77881986 + MER7A DNA MER2_type 2 72 -276 1622 148 44 0 chr5 121748249 121748520 -77881630 + MER7A DNA MER2_type 64 344 -2 1472 110 4 51 chr5 121748757 121748993 -77881157 + AluJb SINE Alu 77 301 -11 458 153 34 40 chr5 121749018 121749195 -77880955 + GA-rich Low_complexity Low_complexity 3 178 0 4157 99 21 25 chr5 121749349 121750106 -77880044 + L1PB1 LINE L1 5398 6151 0 210 171 0 0 chr5 121750133 121750168 -77879982 + A-rich Low_complexity Low_complexity 1 35 0 1061 115 28 6 chr5 121750168 121750350 -77879800 - LTR39 LTR ERV1 -552 231 46 1438 132 78 71 chr5 121750619 121750809 -77879341 - AluJo SINE Alu -15 297 103 2259 78 7 3 chr5 121750809 121751104 -77879046 + AluSq SINE Alu 1 296 -17 1438 132 78 71 chr5 121751104 121751208 -77878942 - AluJo SINE Alu -209 103 1 21 0 0 0 chr5 121751299 121751320 -77878830 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 121752679 121752704 -77877446 + GC_rich Low_complexity Low_complexity 1 25 0 239 284 97 45 chr5 121754693 121754827 -77875323 - MIR3 SINE MIR -43 165 25 235 323 120 0 chr5 121755384 121755551 -77874599 - MLT1L LTR MaLR -6 609 423 854 119 152 48 chr5 121755794 121756004 -77874146 - AluSq SINE Alu -81 232 1 1996 141 3 0 chr5 121756226 121756548 -77873602 - AluSx SINE Alu 0 312 1 27 0 0 0 chr5 121756736 121756763 -77873387 + AT_rich Low_complexity Low_complexity 1 27 0 3955 102 33 2 chr5 121757087 121757688 -77872462 + MER51A LTR ERV1 15 634 0 916 205 42 17 chr5 121757725 121758044 -77872106 + L1 LINE L1 4938 5267 -879 413 245 31 0 chr5 121759131 121759229 -77870921 + MIR SINE MIR 86 186 -76 5743 187 43 18 chr5 121759362 121760298 -77869852 - L1 LINE L1 -1978 4168 3179 2121 143 0 6 chr5 121760298 121760612 -77869538 + AluSx SINE Alu 1 312 0 5743 187 43 18 chr5 121760612 121761146 -77869004 - L1 LINE L1 -2967 3179 2660 229 249 83 57 chr5 121761303 121761496 -77868654 - HAL1 LINE L1 -1168 1339 1142 344 265 120 52 chr5 121761502 121761793 -77868357 - L1MEd LINE L1 -5104 966 656 365 354 76 61 chr5 121761873 121762331 -77867819 - L1MEd LINE L1 -5525 545 81 189 74 0 0 chr5 121763651 121763678 -77866472 + (TC)n Simple_repeat Simple_repeat 1 27 0 2262 193 121 73 chr5 121763910 121764204 -77865946 + L1MD3 LINE L1 6799 7078 -917 241 221 0 132 chr5 121764204 121764272 -77865878 + MLT1F1 LTR MaLR 66 124 -443 2262 193 121 73 chr5 121764272 121764821 -77865329 + L1MD3 LINE L1 7078 7974 -21 26 64 0 0 chr5 121764885 121764932 -77865218 + AT_rich Low_complexity Low_complexity 1 47 0 649 279 96 0 chr5 121765252 121765492 -77864658 - L1MC4a LINE L1 -1903 5905 5643 515 231 113 52 chr5 121766149 121766378 -77863772 + MIR SINE MIR 20 262 0 378 182 0 13 chr5 121766441 121766518 -77863632 + MER5C DNA MER1_type 3 78 -246 406 146 24 0 chr5 121766864 121766946 -77863204 - L2 LINE L2 -548 2766 2683 749 245 72 36 chr5 121767205 121767511 -77862639 + L1MEc LINE L1 470 786 -5610 2402 184 68 6 chr5 121767527 121768000 -77862150 - MER90 LTR ERV1 -44 570 69 227 241 114 0 chr5 121768225 121768304 -77861846 - L1MEd LINE L1 -5978 92 5 1742 117 36 4 chr5 121769060 121769307 -77860843 - AluSq SINE Alu -58 255 1 276 77 0 0 chr5 121771725 121771764 -77858386 + (CA)n Simple_repeat Simple_repeat 2 40 0 2231 129 18 6 chr5 121772075 121772407 -77857743 - MER1B DNA MER1_type -1 336 1 2189 103 3 3 chr5 121773068 121773359 -77856791 - AluSp SINE Alu -22 291 1 318 175 21 41 chr5 121773360 121773457 -77856693 + Charlie7 DNA MER1_type 2518 2612 0 1414 120 5 0 chr5 121773986 121774178 -77855972 + AluSg SINE Alu 1 193 -117 275 24 0 49 chr5 121775376 121775417 -77854733 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 415 197 78 39 chr5 121775604 121775763 -77854387 + AluSc SINE Alu 1 156 -143 214 319 128 11 chr5 121778337 121778431 -77851719 + MIR SINE MIR 36 140 -68 272 156 0 0 chr5 121778825 121778870 -77851280 - AluSc SINE Alu -2 297 253 338 229 0 0 chr5 121779810 121779871 -77850279 - L2 LINE L2 -17 3255 3195 499 236 304 14 chr5 121780121 121780341 -77849809 - L2 LINE L2 -420 2894 2611 736 232 38 22 chr5 121780753 121780938 -77849212 + MER5A DNA MER1_type 1 188 -1 421 302 44 11 chr5 121780938 121781120 -77849030 + MIR SINE MIR 8 195 -67 353 218 61 19 chr5 121781199 121781328 -77848822 + MLT1G1 LTR MaLR 2 157 -431 491 213 50 50 chr5 121781383 121781452 -77848698 - MER63A DNA MER1_type -1513 175 107 2133 129 0 3 chr5 121781452 121781771 -77848379 - AluSx SINE Alu 0 318 1 491 213 50 50 chr5 121781771 121781860 -77848290 - MER63A DNA MER1_type -1580 108 16 232 214 131 21 chr5 121781904 121782049 -77848101 + MLT1G1 LTR MaLR 172 332 -198 325 253 82 35 chr5 121782591 121782654 -77847496 + MER5B DNA MER1_type 1 60 -118 2591 68 0 0 chr5 121782654 121782962 -77847188 + AluSc SINE Alu 1 308 -1 325 253 82 35 chr5 121782962 121783068 -77847082 + MER5B DNA MER1_type 60 178 0 276 305 81 58 chr5 121783609 121784092 -77846058 - L2 LINE L2 -85 3228 2733 1078 252 90 86 chr5 121784120 121784688 -77845462 + MER21B LTR ERV1 24 593 -270 223 378 8 8 chr5 121785646 121785765 -77844385 - MIR SINE MIR -122 140 22 1588 128 0 13 chr5 121787021 121787255 -77842895 + AluSg/x SINE Alu 75 305 -7 233 314 47 12 chr5 121787297 121787383 -77842767 + MER5A DNA MER1_type 40 128 -61 289 288 199 27 chr5 121787414 121787560 -77842590 + MER5A DNA MER1_type 19 189 0 396 0 0 0 chr5 121787727 121787771 -77842379 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 669 253 67 18 chr5 121788476 121788701 -77841449 - LTR16A1 LTR ERVL -55 402 167 819 246 81 68 chr5 121789791 121790258 -77839892 + MLT1J LTR MaLR 1 473 -38 312 217 158 33 chr5 121790452 121790572 -77839578 - L2 LINE L2 -233 3080 2946 181 279 16 16 chr5 121790702 121790763 -77839387 - L2 LINE L2 -526 2788 2728 261 328 109 7 chr5 121791693 121791986 -77838164 + L2 LINE L2 2990 3312 -1 21 57 0 0 chr5 121792559 121792594 -77837556 + GC_rich Low_complexity Low_complexity 1 35 0 2259 99 10 0 chr5 121794514 121794806 -77835344 + AluSx SINE Alu 1 295 -17 197 277 46 0 chr5 121794876 121794941 -77835209 - L2 LINE L2 0 3313 3246 206 31 0 31 chr5 121795285 121795317 -77834833 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 634 285 61 40 chr5 121795327 121795653 -77834497 - L2 LINE L2 0 3313 2981 234 171 37 37 chr5 121795723 121795850 -77834300 + (CGAAA)n Simple_repeat Simple_repeat 1 127 0 2004 166 0 3 chr5 121796919 121797232 -77832918 + AluJb SINE Alu 1 312 0 184 316 15 138 chr5 121798507 121798637 -77831513 + MIR3 SINE MIR 16 116 -92 2120 132 0 3 chr5 121798637 121798940 -77831210 - AluSx SINE Alu -10 302 1 184 316 15 138 chr5 121798940 121799005 -77831145 + MIR3 SINE MIR 116 187 -21 523 296 49 31 chr5 121799146 121799372 -77830778 - MIR SINE MIR -4 258 29 24 0 0 0 chr5 121799525 121799549 -77830601 + AT_rich Low_complexity Low_complexity 1 24 0 626 217 0 0 chr5 121800203 121800318 -77829832 + FLAM_A SINE Alu 16 130 -12 2217 126 7 0 chr5 121800321 121800631 -77829519 + AluSx SINE Alu 1 312 0 1152 158 108 21 chr5 121800633 121800873 -77829277 + AluJo SINE Alu 1 261 -51 521 275 147 18 chr5 121801148 121801366 -77828784 + MIR SINE MIR 17 262 0 360 313 61 0 chr5 121802022 121802169 -77827981 - LTR67 LTR ERVL -336 221 66 338 245 29 20 chr5 121802352 121802454 -77827696 + L2 LINE L2 3208 3310 -3 27 49 0 0 chr5 121802520 121802561 -77827589 + AT_rich Low_complexity Low_complexity 1 41 0 2088 105 36 0 chr5 121802603 121802905 -77827245 + AluSx SINE Alu 1 312 0 266 186 16 22 chr5 121803269 121803357 -77826793 - MIR SINE MIR -66 142 58 360 64 0 0 chr5 121803847 121803894 -77826256 + (TG)n Simple_repeat Simple_repeat 1 47 0 1944 112 80 0 chr5 121804449 121804735 -77825415 + AluSq SINE Alu 1 309 -4 635 276 12 12 chr5 121805235 121805405 -77824745 + MIR SINE MIR 5 174 -88 188 75 0 50 chr5 121805415 121805455 -77824695 + (TTTTTA)n Simple_repeat Simple_repeat 5 42 0 707 256 27 116 chr5 121805487 121805893 -77824257 - L2 LINE L2 -22 3250 2881 2507 59 0 0 chr5 121807037 121807341 -77822809 + AluY SINE Alu 1 304 -7 1428 196 53 20 chr5 121807977 121808278 -77821872 - AluJo SINE Alu -1 311 1 2488 80 0 0 chr5 121808422 121808733 -77821417 + AluY SINE Alu 1 311 0 2149 103 10 17 chr5 121809608 121809908 -77820242 - AluSq SINE Alu -15 298 1 694 242 103 9 chr5 121810209 121810432 -77819718 - MIR SINE MIR 0 262 19 359 271 9 19 chr5 121810562 121810669 -77819481 + MER5A DNA MER1_type 54 159 -30 2348 87 13 0 chr5 121810922 121811221 -77818929 - AluY SINE Alu -8 303 1 4553 163 13 66 chr5 121811297 121811819 -77818331 - L1MB8 LINE L1 -3 6175 5627 2070 156 0 0 chr5 121811819 121812127 -77818023 - AluJb SINE Alu -4 308 1 4553 163 13 66 chr5 121812127 121812494 -77817656 - L1MB8 LINE L1 -551 5627 5242 2381 57 0 0 chr5 121812494 121812773 -77817377 - AluY SINE Alu -10 301 23 4553 163 13 66 chr5 121812773 121812910 -77817240 - L1MB8 LINE L1 -936 5242 5203 1658 155 68 4 chr5 121812910 121813198 -77816952 - AluSx SINE Alu 0 305 1 4553 163 13 66 chr5 121813198 121813230 -77816920 - L1MB8 LINE L1 -975 5203 5171 1424 142 14 0 chr5 121813279 121813498 -77816652 + MLT1C LTR MaLR 1 222 -245 764 263 6 6 chr5 121813527 121813698 -77816452 + MLT1C LTR MaLR 285 455 -12 3472 165 68 10 chr5 121813698 121814370 -77815780 + MER50 LTR ERV1 1 711 -23 386 95 32 0 chr5 121814421 121814484 -77815666 + CT-rich Low_complexity Low_complexity 3 67 0 786 177 6 116 chr5 121814485 121814666 -77815484 - AluSg/x SINE Alu 0 312 152 764 134 0 0 chr5 121814668 121814780 -77815370 + MER4E LTR ERV1 668 779 0 24 32 0 0 chr5 121814809 121814840 -77815310 + AT_rich Low_complexity Low_complexity 1 31 0 4581 126 76 1 chr5 121814977 121815645 -77814505 + MER72 LTR ERV1 5 722 0 23 0 0 0 chr5 121815767 121815790 -77814360 + AT_rich Low_complexity Low_complexity 1 23 0 1737 168 0 14 chr5 121815790 121816081 -77814069 - AluJo SINE Alu -25 287 1 21 0 0 0 chr5 121816429 121816450 -77813700 + AT_rich Low_complexity Low_complexity 1 21 0 242 299 84 28 chr5 121816727 121816834 -77813316 - L2 LINE L2 -19 3253 3141 644 259 55 78 chr5 121816861 121817209 -77812941 + MLT1I LTR MaLR 66 405 -4 189 226 0 0 chr5 121817326 121817357 -77812793 - L2 LINE L2 -257 3056 3026 624 222 15 1 chr5 121817385 121817529 -77812621 + L1MC4 LINE L1 7438 7648 -226 2056 104 4 4 chr5 121817752 121818030 -77812120 + AluSx SINE Alu 18 295 -17 15374 39 4 31 chr5 121818402 121820864 -77809286 - L1P1 LINE L1 -459 5696 3309 250 299 0 45 chr5 121821143 121821300 -77808850 + T-rich Low_complexity Low_complexity 4 153 0 * 467 268 11 28 chr5 121821262 121821556 -77808594 + CT-rich Low_complexity Low_complexity 1 289 0 183 80 0 0 chr5 121822141 121822166 -77807984 + (CA)n Simple_repeat Simple_repeat 2 26 0 2244 101 0 29 chr5 121822732 121823048 -77807102 - AluSg SINE Alu -3 307 1 38 22 0 0 chr5 121823915 121823960 -77806190 + AT_rich Low_complexity Low_complexity 1 45 0 289 220 45 0 chr5 121823960 121824092 -77806058 + (TA)n Simple_repeat Simple_repeat 1 138 0 35 41 0 0 chr5 121824092 121824141 -77806009 + AT_rich Low_complexity Low_complexity 1 49 0 216 342 26 0 chr5 121824284 121824360 -77805790 - L2 LINE L2 -581 2733 2656 2911 222 44 44 chr5 121824382 121825103 -77805047 - MER21B LTR ERV1 -124 739 19 432 333 29 29 chr5 121825294 121825498 -77804652 - ERVL LTR ERVL -3902 1862 1659 364 244 0 57 chr5 121827080 121827203 -77802947 - LTR67 LTR ERVL 0 557 442 398 288 20 45 chr5 121828438 121828636 -77801514 + L2 LINE L2 3115 3307 -6 1745 156 35 10 chr5 121828804 121829092 -77801058 + AluSx SINE Alu 2 296 -16 342 98 0 0 chr5 121829148 121829199 -77800951 + (TG)n Simple_repeat Simple_repeat 1 51 0 290 296 130 0 chr5 121830207 121830322 -77799828 - L2 LINE L2 -202 3070 2941 2465 78 7 0 chr5 121831553 121831860 -77798290 - AluY SINE Alu -2 309 1 343 110 55 0 chr5 121831928 121832001 -77798149 + (TATATG)n Simple_repeat Simple_repeat 2 78 0 251 256 102 22 chr5 121832590 121832727 -77797423 - MARNA DNA Mariner -132 454 307 22 0 0 0 chr5 121832847 121832869 -77797281 + AT_rich Low_complexity Low_complexity 1 22 0 586 314 55 5 chr5 121833227 121833447 -77796703 - MIR SINE MIR -19 243 13 378 0 0 0 chr5 121833553 121833595 -77796555 + (CA)n Simple_repeat Simple_repeat 2 43 0 2017 121 47 83 chr5 121834317 121834704 -77795446 - THE1C LTR MaLR 0 375 3 2317 84 0 14 chr5 121836129 121836426 -77793724 - AluY SINE Alu -16 295 3 780 242 21 26 chr5 121836910 121837100 -77793050 - MER5A DNA MER1_type 0 189 1 228 304 32 88 chr5 121837291 121837416 -77792734 + MIR SINE MIR 33 150 -58 1516 211 48 8 chr5 121837429 121837780 -77792370 - LTR40c LTR ERVL -93 372 8 436 316 93 19 chr5 121837804 121838073 -77792077 - L1MC/D LINE L1 -2174 5634 5346 228 345 121 0 chr5 121838300 121838416 -77791734 - L2 LINE L2 0 3313 3184 304 273 0 13 chr5 121838621 121838698 -77791452 + MIR SINE MIR 32 107 -155 255 157 20 0 chr5 121838766 121838817 -77791333 - MER115 DNA AcHobo -45 648 597 2127 217 78 29 chr5 121838820 121839292 -77790858 + L1M4 LINE L1 4577 5089 -1057 2285 107 7 3 chr5 121839292 121839600 -77790550 - AluSq SINE Alu -4 309 1 2127 217 78 29 chr5 121839600 121839754 -77790396 + L1M4 LINE L1 5089 5234 -912 1364 186 191 31 chr5 121839755 121840143 -77790007 + LTR7 LTR ERV1 1 450 0 1068 197 29 24 chr5 121840143 121840568 -77789582 + HERVH LTR ERV1 1 459 -7254 12493 136 8 30 chr5 121840628 121842713 -77787437 + HERVH LTR ERV1 792 2830 -4883 4087 137 8 5 chr5 121842713 121843348 -77786802 + HERVH LTR ERV1 3357 3993 -3720 983 92 24 30 chr5 121843419 121843583 -77786567 + HERVH LTR ERV1 7551 7713 0 1272 157 101 138 chr5 121843585 121843919 -77786231 + LTR7 LTR ERV1 3 317 -133 2063 98 44 24 chr5 121843919 121844214 -77785936 + AluY SINE Alu 1 301 -10 1272 157 101 138 chr5 121844214 121844344 -77785806 + LTR7 LTR ERV1 317 450 0 398 200 190 33 chr5 121844390 121844695 -77785455 - Zaphod DNA AcHobo -84 3947 3595 2843 211 127 37 chr5 121844701 121845596 -77784554 - Zaphod DNA AcHobo -3055 976 1 462 313 79 5 chr5 121845625 121845839 -77784311 + L2 LINE L2 1923 2152 -1162 893 290 146 47 chr5 121845952 121846424 -77783726 + LTR33 LTR ERVL 3 521 0 393 331 74 25 chr5 121846944 121847186 -77782964 + HERVL LTR ERVL 4491 4744 -910 429 266 31 16 chr5 121847193 121847475 -77782675 + L1ME3 LINE L1 2693 4225 -1921 2905 242 62 10 chr5 121847479 121848637 -77781513 + L1ME3 LINE L1 4942 6327 -7 845 229 34 17 chr5 121848651 121848944 -77781206 + L1M4 LINE L1 2903 3200 -2946 819 241 110 87 chr5 121849404 121849749 -77780401 + MLT1K LTR MaLR 228 580 -8 868 182 0 0 chr5 121851630 121851762 -77778388 - FLAM_C SINE Alu -1 132 1 2348 102 0 0 chr5 121852073 121852378 -77777772 + AluSg SINE Alu 1 305 -5 241 309 51 60 chr5 121852741 121852958 -77777192 + L2 LINE L2 690 904 -2410 21653 156 41 13 chr5 121853196 121856575 -77773575 + L1MA2 LINE L1 1 3281 -4284 276 53 0 0 chr5 121856575 121856613 -77773537 + (CA)n Simple_repeat Simple_repeat 1 38 0 21653 156 41 13 chr5 121856613 121856780 -77773370 + L1MA2 LINE L1 3281 3442 -4123 2334 117 0 0 chr5 121856780 121857087 -77773063 + AluSg SINE Alu 1 307 -3 21653 156 41 13 chr5 121857087 121858148 -77772002 + L1MA2 LINE L1 3442 4751 -2814 4977 168 19 1 chr5 121858139 121859054 -77771096 + L1MA2 LINE L1 5696 6626 -939 * 5949 92 36 4 chr5 121859060 121859874 -77770276 + L1MA2 LINE L1 6884 7723 0 747 82 0 8 chr5 121859895 121860017 -77770133 - MER6 DNA MER2_type -137 728 608 5911 109 14 19 chr5 121860023 121860900 -77769250 + L1MA3 LINE L1 5429 6300 -5 268 333 62 36 chr5 121860973 121861279 -77768871 + L2 LINE L2 1354 1667 -1647 1333 228 81 21 chr5 121862854 121863426 -77766724 - L1MEc LINE L1 -2818 3397 2741 * 27097 37 3 11 chr5 121863425 121869609 -77760541 + L1PA3 LINE L1 4 6155 0 337 202 126 25 chr5 121869605 121869724 -77760426 - L1MEc LINE L1 -3454 2761 2631 * 1309 288 37 15 chr5 121869728 121870135 -77760015 - LTR40a LTR ERVL -103 416 1 230 274 44 35 chr5 121870144 121870206 -77759944 + L2 LINE L2 1683 1748 -1566 1619 197 44 19 chr5 121870206 121870571 -77759579 - MLT1A2 LTR MaLR 0 374 1 230 274 44 35 chr5 121870571 121870621 -77759529 + L2 LINE L2 1748 1796 -1518 1987 204 21 12 chr5 121870841 121871325 -77758825 - L1MB7 LINE L1 -16 6168 5681 1251 219 135 4 chr5 121871338 121871852 -77758298 - L1MEc LINE L1 -3570 2645 2112 22 0 0 0 chr5 121871852 121871874 -77758276 + AT_rich Low_complexity Low_complexity 1 22 0 221 98 78 0 chr5 121871986 121872037 -77758113 + (TA)n Simple_repeat Simple_repeat 2 56 0 266 125 21 0 chr5 121872046 121872094 -77758056 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 279 257 29 0 chr5 121872094 121872164 -77757986 - MER77 LTR ERV1 -179 426 355 442 250 38 15 chr5 121872252 121872384 -77757766 + MIR SINE MIR 2 136 -126 280 270 40 53 chr5 121873070 121873222 -77756928 - L1MB7 LINE L1 -703 5467 5315 2079 187 192 0 chr5 121875544 121876138 -77754012 - L1MD2 LINE L1 -363 5996 5258 1872 190 76 2 chr5 121876315 121876751 -77753399 - L1MB3 LINE L1 -7 6412 5945 5860 198 41 19 chr5 121876764 121876932 -77753218 - L1MB3 LINE L1 -540 5879 5716 2207 134 0 0 chr5 121876932 121877231 -77752919 - AluSx SINE Alu -13 299 1 5860 198 41 19 chr5 121877231 121878866 -77751284 - L1MB3 LINE L1 -703 5716 4032 1997 184 31 38 chr5 121878870 121879289 -77750861 - MSTC LTR MaLR 0 428 13 803 179 30 12 chr5 121879290 121879458 -77750692 - L1MB3 LINE L1 -2358 4024 3854 6442 18 0 4 chr5 121879458 121880163 -77749987 + SVA Other Other 685 1386 0 1161 167 51 68 chr5 121880940 121881234 -77748916 + AluJb SINE Alu 2 290 -12 228 67 0 0 chr5 121881249 121881279 -77748871 + (A)n Simple_repeat Simple_repeat 1 30 0 4218 231 26 6 chr5 121881331 121883312 -77746838 - L1MB3 LINE L1 -2520 3862 1841 180 0 0 0 chr5 121883408 121883428 -77746722 + (T)n Simple_repeat Simple_repeat 1 20 0 1860 206 81 46 chr5 121883521 121883577 -77746573 - MLT2B1 LTR ERVL 0 520 467 183 80 0 0 chr5 121883577 121883602 -77746548 + (CA)n Simple_repeat Simple_repeat 2 26 0 1860 206 81 46 chr5 121883602 121884041 -77746109 - MLT2B1 LTR ERVL -53 467 8 3360 115 28 0 chr5 121884043 121884540 -77745610 + MER75 DNA T2_type 4 514 0 233 403 93 0 chr5 121884610 121884749 -77745401 - MIR3 SINE MIR -18 190 39 291 296 68 28 chr5 121886302 121886383 -77743767 + L2 LINE L2 3095 3171 -142 198 0 0 0 chr5 121886383 121886405 -77743745 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 291 296 68 28 chr5 121886405 121886499 -77743651 + L2 LINE L2 3171 3277 -36 2149 150 23 69 chr5 121886675 121887109 -77743041 + MLT2D LTR ERVL 1 414 0 953 206 167 30 chr5 121887223 121887722 -77742428 + Charlie7 DNA MER1_type 1513 2146 -466 1820 164 4 0 chr5 121887743 121888023 -77742127 + AluSq SINE Alu 2 282 -31 1888 172 5 37 chr5 121888061 121888438 -77741712 + MLT1A1 LTR MaLR 1 365 0 3746 238 74 58 chr5 121888443 121888477 -77741673 + MLT1A1-int LTR MaLR 5 37 -1334 288 0 0 0 chr5 121888477 121888509 -77741641 + (TA)n Simple_repeat Simple_repeat 2 33 0 2077 152 7 0 chr5 121888509 121888812 -77741338 - AluSx SINE Alu -7 305 1 3746 238 74 58 chr5 121888812 121890112 -77740038 + MLT1A1-int LTR MaLR 36 1362 -9 406 271 94 33 chr5 121890197 121890297 -77739853 + Charlie7 DNA MER1_type 2204 2296 -316 2210 114 0 10 chr5 121890297 121890617 -77739533 + AluSq SINE Alu 1 313 0 406 271 94 33 chr5 121890617 121890877 -77739273 + Charlie7 DNA MER1_type 2296 2586 -26 384 326 93 8 chr5 121891764 121891893 -77738257 + MIR SINE MIR 28 167 -95 360 0 0 0 chr5 121891921 121891961 -77738189 + (TA)n Simple_repeat Simple_repeat 1 40 0 3191 170 13 3 chr5 121892099 121892724 -77737426 + L1MB8 LINE L1 5546 6176 -2 654 215 0 8 chr5 121893650 121893780 -77736370 - FLAM_A SINE Alu -4 129 1 1991 174 25 70 chr5 121895199 121895641 -77734509 + MLT2C2 LTR ERVL 3 423 -41 477 0 0 0 chr5 121895641 121895694 -77734456 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 1991 174 25 70 chr5 121895694 121895735 -77734415 + MLT2C2 LTR ERVL 423 464 0 616 160 8 8 chr5 121895864 121895983 -77734167 - MER66B LTR ERV1 0 486 368 1111 178 0 0 chr5 121896141 121896321 -77733829 + AluJo SINE Alu 121 300 -12 1319 210 68 78 chr5 121896561 121897046 -77733104 + Charlie4a DNA MER1_type 28 507 -1 794 210 19 6 chr5 121897467 121897629 -77732521 - FRAM SINE Alu -13 163 1 772 195 39 13 chr5 121898425 121898579 -77731571 + MER5A DNA MER1_type 10 167 -22 250 320 50 0 chr5 121898935 121899035 -77731115 + L2 LINE L2 3168 3272 0 1476 278 71 20 chr5 121899089 121899678 -77730472 - MLT1E2 LTR MaLR -7 619 1 2281 107 36 38 chr5 121899807 121900172 -77729978 - THE1B LTR MaLR 0 364 1 11425 111 2 0 chr5 121900172 121901747 -77728403 - THE1B-int LTR MaLR 0 1580 2 2144 121 39 36 chr5 121901748 121902111 -77728039 - THE1B LTR MaLR 0 364 1 1748 165 0 0 chr5 121902114 121902374 -77727776 - AluJb SINE Alu -52 260 1 183 322 215 0 chr5 121902655 121902776 -77727374 - MIR SINE MIR -70 192 46 183 328 31 16 chr5 121903343 121903407 -77726743 - L2 LINE L2 -2 3270 3206 323 326 68 0 chr5 121904315 121904447 -77725703 - MIR SINE MIR 0 262 122 300 160 31 0 chr5 121904907 121904981 -77725169 - MLT1E3 LTR MaLR 0 624 473 5125 123 16 14 chr5 121904990 121905849 -77724301 - L1PA15 LINE L1 -21 6144 5284 1809 238 150 2 chr5 121905849 121906323 -77723827 - MLT1E LTR MaLR -49 544 1 183 311 33 0 chr5 121906406 121906467 -77723683 + L2 LINE L2 3207 3269 -44 1826 135 0 66 chr5 121907407 121907743 -77722407 + AluSx SINE Alu 1 316 0 569 187 0 0 chr5 121909272 121909379 -77720771 + Charlie4 DNA MER1_type 163 269 -1692 208 333 0 0 chr5 121909526 121909589 -77720561 - L2 LINE L2 -1 3271 3209 309 337 53 0 chr5 121910884 121910979 -77719171 + L2 LINE L2 3148 3247 -25 770 231 70 0 chr5 121911029 121911215 -77718935 - MIR SINE MIR -11 251 53 1825 151 21 0 chr5 121911382 121911666 -77718484 + AluSx SINE Alu 9 298 -14 894 193 64 16 chr5 121912695 121912944 -77717206 + Charlie4 DNA MER1_type 37 297 -1664 1580 148 51 0 chr5 121912978 121913235 -77716915 - AluJb SINE Alu -12 300 31 826 160 87 19 chr5 121913253 121913459 -77716691 + Charlie4 DNA MER1_type 1739 1958 -3 3365 65 16 16 chr5 121913581 121914025 -77716125 - MLT2A1 LTR ERVL 0 444 1 27838 69 16 3 chr5 121914025 121914158 -77715992 - HERVL-A1 LTR ERVL 0 5654 5524 2212 84 0 3 chr5 121914158 121914442 -77715708 - AluY SINE Alu -28 283 1 27838 69 16 3 chr5 121914442 121919895 -77710255 - HERVL-A1 LTR ERVL -130 5524 1 298 135 0 0 chr5 121919895 121919947 -77710203 - MLT2A1 LTR ERVL 0 520 469 245 203 25 8 chr5 121919950 121920068 -77710082 + (TA)n Simple_repeat Simple_repeat 2 121 0 2710 82 31 8 chr5 121920075 121920463 -77709687 - MLT2A1 LTR ERVL -47 397 1 491 148 93 84 chr5 121920509 121920630 -77709520 - L1ME1 LINE L1 0 6178 6052 353 196 59 29 chr5 121921685 121921787 -77708363 - MIR SINE MIR -56 206 102 199 216 27 81 chr5 121921892 121921966 -77708184 - L3 LINE CR1 -106 1471 1402 189 195 0 0 chr5 121922536 121922577 -77707573 + CT-rich Low_complexity Low_complexity 1 41 0 427 190 13 0 chr5 121923509 121923588 -77706562 - MER96 DNA MER1_type? 0 175 96 267 210 16 0 chr5 121923590 121923652 -77706498 + MER96 DNA MER1_type? 113 175 0 445 248 225 34 chr5 121923675 121923937 -77706213 - L2 LINE L2 -3 3310 2999 573 266 43 71 chr5 121923958 121924240 -77705910 + MER102a DNA MER1_type 57 330 0 2371 150 2 34 chr5 121926754 121927168 -77702982 - MER57A LTR ERV1 0 403 3 1637 121 12 8 chr5 121927170 121927427 -77702723 - MER57A-int LTR ERV1 0 7537 7280 708 107 41 8 chr5 121927430 121927552 -77702598 - LTR54B LTR ERV1 -370 128 3 6192 151 22 28 chr5 121927552 121928268 -77701882 - MER57A-int LTR ERV1 -390 7147 6439 1790 157 35 3 chr5 121928268 121928555 -77701595 - AluJb SINE Alu -16 296 1 6192 151 22 28 chr5 121928555 121928981 -77701169 - MER57A-int LTR ERV1 -1098 6439 6012 19178 165 29 11 chr5 121928981 121935897 -77694253 - L1M1 LINE L1 -669 7054 10 1930 189 82 5 chr5 121936749 121937173 -77692977 + LTR32 LTR ERVL 15 471 0 290 326 47 0 chr5 121937173 121937259 -77692891 + L2 LINE L2 3178 3267 -5 194 267 322 0 chr5 121937302 121937392 -77692758 - MIR SINE MIR -116 146 28 211 339 15 46 chr5 121937415 121937545 -77692605 - L2 LINE L2 -32 3281 3156 299 276 88 68 chr5 121939650 121939842 -77690308 - LTR24C-int LTR ERV1 -6184 574 379 533 268 60 63 chr5 121939876 121940383 -77689767 - LTR24C-int LTR ERV1 -4476 647 1 2673 156 99 4 chr5 121940383 121940940 -77689210 - LTR24C LTR ERV1 0 635 26 6025 112 36 29 chr5 121940943 121941319 -77688831 - L1PA15 LINE L1 -1 6164 5792 255 79 0 0 chr5 121941319 121941357 -77688793 + (TG)n Simple_repeat Simple_repeat 2 39 0 6025 112 36 29 chr5 121941357 121942629 -77687521 - L1PA15 LINE L1 -373 5792 4512 1868 153 65 16 chr5 121942659 121942980 -77687170 + MER1B DNA MER1_type 1 337 0 224 236 0 18 chr5 121943308 121943363 -77686787 + (TATG)n Simple_repeat Simple_repeat 2 55 0 315 71 0 0 chr5 121943376 121943418 -77686732 + (TG)n Simple_repeat Simple_repeat 2 43 0 279 262 74 8 chr5 121943462 121943584 -77686566 + L1ME4a LINE L1 5990 6119 -2 1163 157 35 5 chr5 121943601 121943798 -77686352 + AluJo SINE Alu 82 284 -28 282 262 0 98 chr5 121944812 121944934 -77685216 + Charlie8 DNA MER1_type 9 118 -2299 1619 239 55 14 chr5 121944938 121945431 -77684719 + L1ME1 LINE L1 5649 6161 -5 355 301 42 0 chr5 121945436 121945602 -77684548 + Charlie8 DNA MER1_type 88 260 -2157 820 280 77 54 chr5 121945647 121946228 -77683922 - L2 LINE L2 -2 3311 2735 2047 50 0 0 chr5 121946744 121946986 -77683164 + AluY SINE Alu 70 311 0 882 142 74 11 chr5 121947271 121947447 -77682703 + LTR47A LTR ERVL 266 452 0 195 42 0 0 chr5 121947847 121947871 -77682279 + (A)n Simple_repeat Simple_repeat 1 24 0 828 189 72 6 chr5 121947892 121948072 -77682078 + LTR47A LTR ERVL 261 452 0 1278 255 50 82 chr5 121948467 121948801 -77681349 + L1MDa LINE L1 33 376 -6164 3639 134 16 10 chr5 121948801 121949082 -77681068 - L1PA16 LINE L1 -9 6157 5879 2245 138 11 16 chr5 121949082 121949459 -77680691 + THE1C LTR MaLR 1 375 0 3639 134 16 10 chr5 121949459 121949757 -77680393 - L1PA16 LINE L1 -287 5879 5575 1278 255 50 82 chr5 121949757 121950150 -77680000 + L1MDa LINE L1 376 1133 -5407 1877 152 9 99 chr5 121950150 121950496 -77679654 - MSTD LTR MaLR 0 396 21 2252 99 0 7 chr5 121950496 121950789 -77679361 + AluY SINE Alu 1 291 -20 1609 147 202 17 chr5 121950798 121951159 -77678991 - MSTA LTR MaLR 0 428 1 8937 183 19 5 chr5 121951159 121952787 -77677363 - THE1C-int LTR MaLR 0 1651 1 1667 129 83 55 chr5 121952787 121952828 -77677322 - THE1C LTR MaLR 0 375 337 2248 128 0 0 chr5 121952828 121953126 -77677024 + AluSx SINE Alu 1 298 -14 1667 129 83 55 chr5 121953126 121953447 -77676703 - THE1C LTR MaLR -38 337 3 1877 152 9 99 chr5 121953447 121953523 -77676627 - MSTD LTR MaLR -380 16 1 1660 204 86 27 chr5 121953523 121954083 -77676067 + L1MDa LINE L1 1129 1721 -4819 1229 201 9 67 chr5 121954085 121954413 -77675737 - MER57A LTR ERV1 -94 309 1 1223 189 25 17 chr5 121954424 121954778 -77675372 + L1MDa LINE L1 2190 2546 -3994 255 289 0 12 chr5 121955589 121955672 -77674478 + MER94 DNA DNA 1 82 -52 2081 153 19 13 chr5 121956362 121956735 -77673415 + THE1C LTR MaLR 1 375 0 340 207 16 0 chr5 121957256 121957377 -77672773 + (TA)n Simple_repeat Simple_repeat 1 123 0 1478 177 44 27 chr5 121957854 121958148 -77672002 - AluJo SINE Alu -13 299 1 1464 191 67 27 chr5 121958275 121958574 -77671576 + AluJb SINE Alu 1 311 -1 420 206 11 22 chr5 121959324 121959416 -77670734 + AluJo SINE Alu 57 147 -165 564 207 186 0 chr5 121960108 121960248 -77669902 + AluJo SINE Alu 129 294 -18 1074 176 50 97 chr5 121961069 121961513 -77668637 - LTR37A LTR ERV1 0 426 4 239 114 23 0 chr5 121961847 121961891 -77668259 + (CA)n Simple_repeat Simple_repeat 2 46 0 269 282 8 32 chr5 121962395 121962519 -77667631 - MER104 DNA Tc2 -59 121 1 650 251 45 30 chr5 121962529 121962728 -77667422 - MIR SINE MIR 0 262 61 1611 174 32 48 chr5 121962882 121963198 -77666952 - AluJb SINE Alu -1 311 1 1190 112 39 0 chr5 121963239 121963417 -77666733 - U2 snRNA snRNA -1 187 3 1612 134 138 0 chr5 121964142 121964403 -77665747 + AluSx SINE Alu 2 298 -4 239 255 0 0 chr5 121965260 121965311 -77664839 + L2 LINE L2 3210 3260 -12 848 256 5 10 chr5 121965961 121966168 -77663982 - MLT1F LTR MaLR -335 207 2 483 216 52 9 chr5 121966176 121966292 -77663858 + MIR SINE MIR 86 206 -56 184 244 0 0 chr5 121966608 121966649 -77663501 + L2 LINE L2 2934 2974 -340 234 240 0 20 chr5 121966729 121966779 -77663371 + polypyrimidine Low_complexity Low_complexity 6 54 0 265 270 163 66 chr5 121966817 121967013 -77663137 - L2 LINE L2 -1 3312 3098 23 0 0 0 chr5 121967045 121967068 -77663082 + AT_rich Low_complexity Low_complexity 1 23 0 307 360 54 0 chr5 121967082 121967193 -77662957 + L2 LINE L2 3151 3267 -5 214 191 0 0 chr5 121967193 121967235 -77662915 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 1963 198 46 18 chr5 121967676 121968177 -77661973 - Charlie1b DNA MER1_type -8 515 1 495 263 36 15 chr5 121968283 121968420 -77661730 - MER5A DNA MER1_type -1 188 49 625 348 40 8 chr5 121968945 121969195 -77660955 + L2 LINE L2 2377 2634 -680 252 0 0 0 chr5 121969195 121969223 -77660927 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 454 219 45 62 chr5 121969223 121969401 -77660749 - L2 LINE L2 -17 3296 3122 255 233 17 0 chr5 121969368 121969428 -77660722 - L2 LINE L2 -1003 2311 2251 * 406 333 186 10 chr5 121969447 121969759 -77660391 + L2 LINE L2 2897 3263 -50 378 0 0 0 chr5 121969831 121969873 -77660277 + (CA)n Simple_repeat Simple_repeat 2 43 0 2022 128 16 29 chr5 121969932 121970244 -77659906 - AluJo SINE Alu -4 308 1 1387 127 45 5 chr5 121970662 121970883 -77659267 - MER30 DNA MER1_type 0 230 1 421 271 132 68 chr5 121971102 121971383 -77658767 - L1M4c LINE L1 -3170 3212 2914 350 310 120 0 chr5 121971407 121971549 -77658601 - L1M4c LINE L1 -3527 2855 2697 363 241 105 82 chr5 121971639 121971988 -77658162 - L1M4c LINE L1 -3831 2566 2160 571 312 15 31 chr5 121972238 121972562 -77657588 - HAL1 LINE L1 -766 1741 1423 376 194 31 0 chr5 121972700 121972798 -77657352 + CT-rich Low_complexity Low_complexity 1 101 0 257 273 0 0 chr5 121972810 121972865 -77657285 + polypyrimidine Low_complexity Low_complexity 3 57 0 368 238 114 69 chr5 121973027 121973229 -77656921 - HAL1 LINE L1 -1471 1036 826 563 149 11 0 chr5 121974953 121975040 -77655110 + AluJ/FLAM SINE Alu 12 99 -213 355 161 16 0 chr5 121975646 121975708 -77654442 + MER6 DNA MER2_type 1 63 -802 2195 138 21 3 chr5 121975726 121976102 -77654048 + MER6 DNA MER2_type 222 864 -1 779 161 0 27 chr5 121976421 121976570 -77653580 - AluJb SINE Alu 0 312 168 288 229 53 8 chr5 121977197 121977328 -77652822 - MER53 DNA DNA -40 149 13 706 184 38 6 chr5 121977571 121977729 -77652421 - L1MB8 LINE L1 -1 6177 6015 1212 130 37 9 chr5 121977773 121977988 -77652162 + MSTB-int LTR MaLR 1426 1646 -5 2383 158 44 5 chr5 121977994 121978404 -77651746 + MSTB LTR MaLR 1 426 0 602 219 26 13 chr5 121978404 121978555 -77651595 - L1MB8 LINE L1 -188 5990 5838 1258 198 0 0 chr5 121978557 121978759 -77651391 - AluJo SINE Alu -21 291 90 1081 199 99 0 chr5 121978766 121979093 -77651057 - L1MD3 LINE L1 -531 5653 5431 281 310 115 25 chr5 121979332 121979653 -77650497 + HAL1b LINE L1 300 527 -821 419 264 156 33 chr5 121980315 121980533 -77649617 + MIR SINE MIR 3 246 -16 23 78 0 0 chr5 121980536 121980587 -77649563 + AT_rich Low_complexity Low_complexity 1 51 0 247 369 126 23 chr5 121981740 121982041 -77648109 + L2 LINE L2 2456 2787 -527 378 0 0 0 chr5 121982338 121982380 -77647770 + (TG)n Simple_repeat Simple_repeat 2 43 0 184 333 16 0 chr5 121982425 121982488 -77647662 + L2 LINE L2 3209 3272 0 459 92 0 0 chr5 121982636 121982701 -77647449 + (TA)n Simple_repeat Simple_repeat 1 65 0 378 275 61 36 chr5 121984328 121984476 -77645674 - MIR3 SINE MIR -54 154 15 416 303 6 62 chr5 121984613 121984775 -77645375 + MER5A DNA MER1_type 7 159 -30 1763 177 0 23 chr5 121984928 121985227 -77644923 + AluJo SINE Alu 1 292 -20 1494 110 39 12 chr5 121985249 121985504 -77644646 + L1MA5A LINE L1 6032 6293 -4 1580 158 28 35 chr5 121986490 121986803 -77643347 + AluJb SINE Alu 1 311 0 381 328 132 30 chr5 121986886 121987325 -77642825 + MLT1K LTR MaLR 105 588 0 263 257 23 49 chr5 121987685 121987787 -77642363 + MIR SINE MIR 67 168 -40 1927 143 0 27 chr5 121987910 121988211 -77641939 - AluSx SINE Alu -19 293 1 465 237 35 0 chr5 121988287 121988401 -77641749 + MER63 DNA MER1_type 7 750 -86 227 274 110 0 chr5 121988395 121988468 -77641682 + MER63 DNA MER1_type 982 1062 0 * 717 232 0 26 chr5 121989351 121989541 -77640609 + L1MC4a LINE L1 5674 5858 -1950 1220 163 94 7 chr5 121989819 121990095 -77640055 - L1MB4 LINE L1 -1 6179 5880 826 289 140 23 chr5 121990820 121991170 -77638980 - L2 LINE L2 -1 3312 2922 211 333 33 11 chr5 121991742 121991832 -77638318 + MIR SINE MIR 18 109 -153 320 239 0 46 chr5 121991855 121991964 -77638186 + MLT1D-int LTR MaLR 1181 1284 -87 707 229 54 61 chr5 121991973 121992416 -77637734 + MLT1D LTR MaLR 1 496 -9 233 261 0 0 chr5 121992467 121992513 -77637637 + MIR SINE MIR 210 255 -7 370 289 87 29 chr5 121992686 121992928 -77637222 - MER102b DNA MER1_type 0 341 86 1037 40 56 0 chr5 121993118 121993244 -77636906 + AluYa5 SINE Alu 1 133 -178 2666 49 0 0 chr5 121993244 121993551 -77636599 + AluY SINE Alu 1 307 -4 4180 248 119 42 chr5 121995555 121996906 -77633244 + HAL1 LINE L1 2 1526 -981 1813 175 4 0 chr5 121996906 121997186 -77632964 - AluJb SINE Alu -31 281 1 4180 248 119 42 chr5 121997186 121997618 -77632532 + HAL1 LINE L1 1526 1923 -584 212 0 36 0 chr5 121997631 121997659 -77632491 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 232 289 124 41 chr5 121997838 121997935 -77632215 + MIR SINE MIR 37 141 -67 523 325 26 0 chr5 121999312 121999463 -77630687 + MIR SINE MIR 10 164 -98 182 247 91 13 chr5 122001016 122001093 -77629057 + L2 LINE L2 3230 3312 -1 2376 110 3 0 chr5 122001673 122001982 -77628168 + AluSq SINE Alu 1 310 -3 202 128 0 26 chr5 122002802 122002841 -77627309 + (CCA)n Simple_repeat Simple_repeat 1 38 0 237 288 92 59 chr5 122003642 122003795 -77626355 + MIR SINE MIR 11 168 -94 21 0 0 0 chr5 122006098 122006119 -77624031 + AT_rich Low_complexity Low_complexity 1 21 0 446 286 56 30 chr5 122007090 122007324 -77622826 - HAL1 LINE L1 -4 2503 2264 1453 222 62 13 chr5 122007373 122007638 -77622512 - L1ME LINE L1 -486 5680 5387 5126 109 32 7 chr5 122007638 122008397 -77621753 - LTR17 LTR ERV1 -2 778 1 1453 222 62 13 chr5 122008397 122008594 -77621556 - L1ME LINE L1 -779 5387 5201 1519 192 14 7 chr5 122008594 122008885 -77621265 - AluJo SINE Alu -14 298 6 1057 129 93 0 chr5 122008892 122009085 -77621065 - L1PA16 LINE L1 -8 6158 5948 281 354 55 33 chr5 122009473 122009654 -77620496 + L2 LINE L2 2568 2752 -562 665 251 248 59 chr5 122010487 122011125 -77619025 - L2 LINE L2 -8 3305 2508 1621 154 43 14 chr5 122011129 122011479 -77618671 - L1MA4 LINE L1 -6 6294 5935 * 6693 73 29 8 chr5 122011470 122013201 -77616949 - L1PA8 LINE L1 -15 6472 4717 2319 78 0 33 chr5 122013201 122013507 -77616643 - AluY SINE Alu -15 296 1 6693 73 29 8 chr5 122013507 122013619 -77616531 - L1PA8 LINE L1 -1770 4717 4609 7427 115 16 9 chr5 122013627 122014865 -77615285 - L1PA8 LINE L1 -3551 2910 1664 2272 152 45 5 chr5 122014871 122015267 -77614883 - L1PA8 LINE L1 -6047 414 3 3327 159 91 10 chr5 122015283 122016568 -77613582 - L1MA4 LINE L1 -359 5941 4559 245 322 105 35 chr5 122016670 122016841 -77613309 + L3 LINE CR1 1277 1459 -118 220 278 100 11 chr5 122017077 122017167 -77612983 + L2 LINE L2 3194 3291 -22 246 290 82 0 chr5 122017211 122017315 -77612835 - L1ME LINE L1 -517 5604 5493 426 231 137 22 chr5 122017342 122017541 -77612609 - L1ME LINE L1 -758 5388 5220 2216 92 0 29 chr5 122018734 122019049 -77611101 + AluSq SINE Alu 1 306 -7 28 48 0 0 chr5 122019257 122019299 -77610851 + AT_rich Low_complexity Low_complexity 1 42 0 1150 221 103 4 chr5 122019450 122019721 -77610429 - AluJo SINE Alu -4 298 1 282 56 0 0 chr5 122021468 122021504 -77608646 + (T)n Simple_repeat Simple_repeat 1 36 0 470 239 278 15 chr5 122022374 122022579 -77607571 + MIR SINE MIR 2 260 -2 186 342 145 8 chr5 122022804 122022921 -77607229 - L2 LINE L2 -20 3293 3161 301 200 53 0 chr5 122025066 122025141 -77605009 - MER116 DNA Mariner 0 80 2 1168 108 72 16 chr5 122026210 122026404 -77603746 + AluSg/x SINE Alu 108 312 0 462 224 89 66 chr5 122027036 122027295 -77602855 + L1ME LINE L1 5529 5793 -328 282 169 108 15 chr5 122027301 122027366 -77602784 + MIR SINE MIR 43 113 -149 1805 105 0 111 chr5 122027711 122028045 -77602105 + AluSc SINE Alu 1 297 -12 213 175 25 0 chr5 122028530 122028570 -77601580 + MER5B DNA MER1_type 3 43 -135 2381 80 0 0 chr5 122029200 122029501 -77600649 - AluSq SINE Alu -12 301 1 322 271 115 57 chr5 122031157 122031349 -77598801 - L1M2 LINE L1 -5874 975 773 307 259 93 62 chr5 122031296 122031458 -77598692 + L1M2 LINE L1 756 922 -5927 * 211 400 0 0 chr5 122033023 122033078 -77597072 + L2 LINE L2 3121 3175 -97 1116 257 133 26 chr5 122033112 122033532 -77596618 - L2 LINE L2 -10 3303 2839 257 315 0 36 chr5 122033550 122033661 -77596489 + L2 LINE L2 2941 3047 -225 2281 111 0 9 chr5 122034455 122034770 -77595380 + AluSx SINE Alu 1 312 0 22 35 0 0 chr5 122034979 122035008 -77595142 + AT_rich Low_complexity Low_complexity 1 29 0 763 189 0 0 chr5 122035082 122035214 -77594936 - FLAM_C SINE Alu -11 132 1 22 56 0 0 chr5 122035461 122035497 -77594653 + AT_rich Low_complexity Low_complexity 1 36 0 300 330 0 28 chr5 122035827 122035936 -77594214 - MLT1L LTR MaLR -84 531 426 24 0 0 0 chr5 122036217 122036241 -77593909 + AT_rich Low_complexity Low_complexity 1 24 0 1715 171 7 17 chr5 122036241 122036539 -77593611 + AluJb SINE Alu 1 295 -17 547 155 60 0 chr5 122036547 122036663 -77593487 - L1MA9 LINE L1 -10 6302 6180 1047 301 132 9 chr5 122037996 122038435 -77591715 - L2 LINE L2 -14 3299 2807 644 161 31 23 chr5 122038686 122038816 -77591334 + FLAM_A SINE Alu 2 132 -1 1939 171 28 8 chr5 122039252 122039643 -77590507 - L1MB3 LINE L1 -4 6179 5781 1979 188 18 23 chr5 122039669 122040111 -77590039 - LTR56 LTR ERV1 0 445 6 2499 170 47 15 chr5 122040112 122040720 -77589430 - L1MB3 LINE L1 -402 5781 5155 225 65 0 0 chr5 122040734 122040765 -77589385 + (TTG)n Simple_repeat Simple_repeat 1 31 0 21 36 0 0 chr5 122040791 122040819 -77589331 + AT_rich Low_complexity Low_complexity 1 28 0 291 104 21 0 chr5 122041140 122041188 -77588962 - U5 snRNA snRNA -67 49 1 4271 213 27 13 chr5 122041345 122042649 -77587501 - L1MB7 LINE L1 -1 6183 4865 1768 167 107 22 chr5 122042819 122043184 -77586966 - MSTD LTR MaLR 0 396 1 241 371 0 10 chr5 122043501 122043598 -77586552 + L2 LINE L2 2072 2167 -1147 186 209 0 0 chr5 122043877 122043920 -77586230 + (TATG)n Simple_repeat Simple_repeat 2 44 0 405 0 0 0 chr5 122043924 122043969 -77586181 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 1962 117 0 8 chr5 122043973 122044238 -77585912 - AluSx SINE Alu -44 268 6 1910 142 3 3 chr5 122044254 122044542 -77585608 - AluJb SINE Alu -22 290 3 1471 160 26 89 chr5 122045223 122045336 -77584814 - L1MA7 LINE L1 -1 6290 6171 1382 162 0 121 chr5 122045336 122045676 -77584474 - AluJo SINE Alu -12 300 2 1471 160 26 89 chr5 122045676 122045912 -77584238 - L1MA7 LINE L1 -120 6171 5963 747 254 12 67 chr5 122046178 122046418 -77583732 - MIR SINE MIR -15 247 21 2212 258 143 27 chr5 122046448 122047849 -77582301 - HAL1 LINE L1 -14 2493 856 753 59 0 0 chr5 122047849 122047950 -77582200 - L1PA8 LINE L1 0 6172 6072 2212 258 143 27 chr5 122047950 122048091 -77582059 - HAL1 LINE L1 -1651 856 733 276 158 24 61 chr5 122048124 122048206 -77581944 - MLT1J2 LTR MaLR -35 415 337 817 240 93 6 chr5 122048321 122048504 -77581646 + MER63A DNA MER1_type 12 210 0 537 240 117 23 chr5 122048504 122048636 -77581514 - MLT1J2 LTR MaLR -302 148 1 383 259 188 24 chr5 122048639 122048809 -77581341 - HAL1 LINE L1 -1787 720 523 1960 213 35 36 chr5 122048811 122049315 -77580835 - MLT1D LTR MaLR -3 489 1 990 298 73 11 chr5 122049387 122049756 -77580394 - HAL1 LINE L1 -2112 395 4 272 340 159 28 chr5 122049877 122050358 -77579792 - L2 LINE L2 0 3272 2724 227 121 0 157 chr5 122050359 122050442 -77579708 - L1M4 LINE L1 -1696 4450 4381 1838 166 25 0 chr5 122050468 122050751 -77579399 - AluJb SINE Alu -22 290 1 893 130 8 0 chr5 122050772 122050903 -77579247 - FLAM_C SINE Alu 0 133 2 358 242 75 52 chr5 122050909 122051080 -77579070 - L1M4 LINE L1 -320 5854 5675 15130 142 50 16 chr5 122051119 122051885 -77578265 + Tigger2 DNA MER2_type 32 771 -1947 2192 110 7 16 chr5 122051885 122052022 -77578128 + AluSx SINE Alu 1 138 -174 2172 95 23 0 chr5 122052022 122052327 -77577823 + AluSq SINE Alu 1 312 -1 2192 110 7 16 chr5 122052327 122052498 -77577652 + AluSx SINE Alu 138 306 -6 15130 142 50 16 chr5 122052498 122054330 -77575820 + Tigger2 DNA MER2_type 771 2718 0 228 186 51 17 chr5 122054332 122054391 -77575759 + MER116 DNA Mariner 14 74 -6 591 277 47 8 chr5 122054425 122054681 -77575469 - L1M4 LINE L1 -581 5581 5316 2257 100 3 0 chr5 122054708 122054999 -77575151 - AluSc SINE Alu -17 292 1 256 280 27 0 chr5 122055214 122055289 -77574861 + MIR3 SINE MIR 104 180 -28 495 239 33 7 chr5 122056845 122056988 -77573162 + MIR3 SINE MIR 23 174 -34 2096 127 0 0 chr5 122057502 122057793 -77572357 + AluSx SINE Alu 1 291 -21 439 149 11 11 chr5 122057793 122057887 -77572263 + GA-rich Low_complexity Low_complexity 3 96 0 434 304 234 26 chr5 122058315 122058700 -77571450 + L2 LINE L2 2807 3271 -1 22 56 0 0 chr5 122059071 122059107 -77571043 + AT_rich Low_complexity Low_complexity 1 36 0 2401 266 233 12 chr5 122059198 122059679 -77570471 + L2 LINE L2 78 451 -2863 2328 208 50 12 chr5 122059679 122060179 -77569971 - LTR40a LTR ERVL 0 519 1 2401 266 233 12 chr5 122060179 122060791 -77569359 + L2 LINE L2 451 1413 -1901 1361 181 118 0 chr5 122060930 122061200 -77568950 + AluJb SINE Alu 1 302 -10 538 234 38 38 chr5 122063764 122063922 -77566228 + MIR SINE MIR 51 208 -54 662 301 46 18 chr5 122064950 122065169 -77564981 + MIR SINE MIR 16 240 -22 2385 214 60 25 chr5 122065401 122066079 -77564071 - L1MC4a LINE L1 -83 7725 7024 19899 101 7 18 chr5 122066096 122072566 -77557584 - L1PA7 LINE L1 -11 6458 1 24 32 0 0 chr5 122073064 122073095 -77557055 + AT_rich Low_complexity Low_complexity 1 31 0 1692 114 0 42 chr5 122073231 122073494 -77556656 + AluSg SINE Alu 50 301 -9 2278 176 31 84 chr5 122074060 122074644 -77555506 - MLT2B3 LTR ERVL 0 554 2 280 226 57 9 chr5 122074801 122074907 -77555243 + L1ME4a LINE L1 5992 6102 -19 425 303 120 11 chr5 122074941 122075116 -77555034 + MIR SINE MIR 28 221 -41 450 155 0 0 chr5 122075138 122075209 -77554941 + Tigger2 DNA MER2_type 2 72 -2646 * 2615 132 45 5 chr5 122075201 122075625 -77554525 + Tigger2 DNA MER2_type 2278 2718 0 202 152 0 0 chr5 122075791 122075824 -77554326 + MIR SINE MIR 218 250 -12 726 262 116 0 chr5 122076475 122076700 -77553450 - MIR SINE MIR 0 262 12 21 57 0 0 chr5 122077439 122077474 -77552676 + AT_rich Low_complexity Low_complexity 1 35 0 25 51 0 0 chr5 122077657 122077696 -77552454 + AT_rich Low_complexity Low_complexity 1 39 0 318 354 147 25 chr5 122077754 122077952 -77552198 - MIR SINE MIR -39 223 2 822 287 43 14 chr5 122078259 122078604 -77551546 + L1ME3A LINE L1 4945 5299 -847 756 149 0 0 chr5 122078612 122078726 -77551424 + FLAM_A SINE Alu 21 134 -8 2097 284 63 16 chr5 122078732 122079545 -77550605 + L1ME3A LINE L1 5316 6166 -4 1360 211 85 5 chr5 122080140 122080491 -77549659 - MER21B LTR ERV1 -28 903 448 2910 85 0 0 chr5 122080491 122080867 -77549283 + THE1-int LTR MaLR 930 1305 -275 6548 94 27 18 chr5 122080871 122081864 -77548286 + L1MA2 LINE L1 5303 6304 0 2098 176 111 26 chr5 122081864 122082331 -77547819 + Tigger2 DNA MER2_type 349 855 -1863 709 205 80 0 chr5 122082328 122082479 -77547671 + Tigger2 DNA MER2_type 2546 2708 -10 * 253 268 0 14 chr5 122082735 122082806 -77547344 - MER94 DNA DNA -64 70 1 1774 242 124 49 chr5 122082908 122083462 -77546688 - MER77 LTR ERV1 0 605 10 256 192 96 55 chr5 122083462 122083535 -77546615 - MIR SINE MIR -167 95 20 240 304 216 0 chr5 122084183 122084285 -77545865 - L2 LINE L2 -33 3239 3116 253 351 77 31 chr5 122084596 122084818 -77545332 - L2 LINE L2 -609 2705 2474 366 259 19 9 chr5 122085015 122085123 -77545027 - L1ME1 LINE L1 -5 6161 6053 1889 163 0 3 chr5 122085396 122085691 -77544459 + AluJb SINE Alu 3 296 -16 298 237 74 70 chr5 122085966 122086181 -77543969 - L1ME4a LINE L1 -44 6077 5862 24 67 0 0 chr5 122086354 122086399 -77543751 + AT_rich Low_complexity Low_complexity 1 45 0 2315 70 7 10 chr5 122086460 122086759 -77543391 - AluY SINE Alu -13 298 1 635 283 120 11 chr5 122086876 122087067 -77543083 - MLT1I LTR MaLR -2 407 196 905 217 20 29 chr5 122087302 122087677 -77542473 - LTR52 LTR ERVL -6 415 1 743 167 23 0 chr5 122088351 122088483 -77541667 - AluJo SINE Alu -177 135 1 1080 232 34 89 chr5 122089055 122089529 -77540621 - L1MC5 LINE L1 -881 7080 6633 1111 220 26 103 chr5 122089531 122089872 -77540278 - L1MC4a LINE L1 -1022 6786 6472 195 42 0 0 chr5 122090287 122090311 -77539839 + (T)n Simple_repeat Simple_repeat 1 24 0 1451 174 98 11 chr5 122090451 122090726 -77539424 - AluJb SINE Alu -13 299 1 591 318 52 19 chr5 122090853 122091064 -77539086 - MIR SINE MIR -39 223 6 387 308 163 9 chr5 122091462 122091683 -77538467 - MIR SINE MIR 0 262 8 1525 113 20 60 chr5 122092743 122092991 -77537159 + AluSx SINE Alu 60 297 -15 919 55 78 0 chr5 122093921 122094049 -77536101 - MER85 DNA T2_type -1 138 1 1895 150 0 10 chr5 122094771 122095077 -77535073 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr5 122095127 122095149 -77535001 + AT_rich Low_complexity Low_complexity 1 22 0 1951 136 32 30 chr5 122098666 122098880 -77531270 - MER44D DNA MER2_type -1882 609 397 1656 160 26 33 chr5 122098880 122099186 -77530964 + AluJo SINE Alu 1 304 -8 1951 136 32 30 chr5 122099186 122099309 -77530841 - MER44D DNA MER2_type -2094 397 1 28 0 0 0 chr5 122100077 122100105 -77530045 + AT_rich Low_complexity Low_complexity 1 28 0 203 152 0 0 chr5 122100221 122100254 -77529896 + (CA)n Simple_repeat Simple_repeat 2 34 0 26 0 0 0 chr5 122101043 122101069 -77529081 + AT_rich Low_complexity Low_complexity 1 26 0 2440 40 37 0 chr5 122103753 122104053 -77526097 - AluY SINE Alu 0 311 1 1104 251 108 39 chr5 122104354 122104788 -77525362 - L2 LINE L2 -1 3312 2849 510 292 203 34 chr5 122104901 122105285 -77524865 + HAL1 LINE L1 2 450 -2057 1097 267 34 37 chr5 122105312 122105638 -77524512 + HAL1 LINE L1 579 903 -1604 274 274 51 26 chr5 122106090 122106207 -77523943 + LTR16A1 LTR ERVL 335 454 -3 1902 247 111 50 chr5 122106231 122106601 -77523549 + HAL1 LINE L1 1016 1362 -1145 1888 169 46 6 chr5 122106601 122106951 -77523199 - MLT1A1 LTR MaLR 0 365 2 1902 247 111 50 chr5 122106951 122107429 -77522721 + HAL1 LINE L1 1362 1916 -591 2041 143 0 3 chr5 122107435 122107728 -77522422 + AluSx SINE Alu 1 292 -20 21 36 0 0 chr5 122107728 122107756 -77522394 + AT_rich Low_complexity Low_complexity 1 28 0 286 229 0 0 chr5 122107833 122107881 -77522269 - Tigger2a DNA MER2_type -1 433 386 991 139 48 6 chr5 122107885 122108050 -77522100 - Tigger2a DNA MER2_type -262 172 1 577 301 88 40 chr5 122108350 122108851 -77521299 + L1MC4a LINE L1 5257 5781 -2027 642 286 24 5 chr5 122108851 122109061 -77521089 + L1MC4a LINE L1 5699 5912 -1896 1453 243 48 42 chr5 122109120 122109597 -77520553 - MLT2B1 LTR ERVL -40 480 1 1866 156 0 3 chr5 122109694 122109977 -77520173 - AluJb SINE Alu -30 282 1 909 265 103 29 chr5 122110420 122110760 -77519390 + LTR16A LTR ERVL 76 440 -10 1262 259 82 33 chr5 122110768 122110800 -77519350 + HERV16 LTR ERVL 1 30 -4966 2440 72 13 0 chr5 122110800 122111105 -77519045 - AluSp SINE Alu -4 309 1 1262 259 82 33 chr5 122111105 122111500 -77518650 + HERV16 LTR ERVL 30 449 -4547 471 267 115 55 chr5 122111628 122111845 -77518305 + HERV16 LTR ERVL 986 1215 -3781 * 3374 306 71 19 chr5 122111831 122113744 -77516406 + HERV16 LTR ERVL 1340 3334 -2320 2565 316 44 32 chr5 122113948 122115191 -77514959 + HERV16 LTR ERVL 3770 5027 -737 234 0 0 0 chr5 122115434 122115460 -77514690 + (TA)n Simple_repeat Simple_repeat 2 27 0 2253 101 0 7 chr5 122115600 122115908 -77514242 + AluSc SINE Alu 1 306 -3 460 306 143 19 chr5 122116036 122116245 -77513905 + MIR SINE MIR 14 248 -14 1000 141 23 23 chr5 122117534 122117711 -77512439 - MER20 DNA MER1_type 0 219 43 315 240 130 65 chr5 122118310 122118464 -77511686 - MER112 DNA MER1_type -32 228 65 2696 72 55 0 chr5 122118484 122118846 -77511304 - MER41A LTR ERV1 0 554 173 1637 179 65 34 chr5 122118855 122119208 -77510942 - LTR10A LTR ERV1 -61 548 185 273 257 99 99 chr5 122119266 122119569 -77510581 - LTR10A LTR ERV1 -306 303 1 1423 51 0 0 chr5 122119569 122119745 -77510405 - MER41A LTR ERV1 -378 176 1 258 313 0 0 chr5 122119746 122119813 -77510337 - MER112 DNA MER1_type -193 67 1 1791 218 56 28 chr5 122119864 122120327 -77509823 - MLT1D LTR MaLR -2 503 28 221 341 34 0 chr5 122120652 122120740 -77509410 - MIR3 SINE MIR -19 189 99 2225 214 52 62 chr5 122120902 122121561 -77508589 + MLT1E1 LTR MaLR 1 652 -2 838 219 45 13 chr5 122121639 122121863 -77508287 + L1ME1 LINE L1 5834 6064 -102 24 0 0 0 chr5 122122343 122122367 -77507783 + AT_rich Low_complexity Low_complexity 1 24 0 556 333 69 55 chr5 122124285 122124706 -77505444 + HAL1b LINE L1 4 430 -918 603 159 14 6 chr5 122124720 122124862 -77505288 + L1MC3 LINE L1 6517 6618 -1167 3714 150 48 99 chr5 122124900 122125860 -77504290 + MER21A LTR ERV1 21 931 0 4380 185 82 28 chr5 122125862 122126264 -77503886 + L1MC3 LINE L1 6616 6995 -790 230 93 0 23 chr5 122126264 122126307 -77503843 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 4380 185 82 28 chr5 122126307 122127014 -77503136 + L1MC3 LINE L1 6995 7785 0 207 114 0 0 chr5 122127493 122127528 -77502622 + (A)n Simple_repeat Simple_repeat 1 35 0 3294 128 54 4 chr5 122127893 122128431 -77501719 + MER34B LTR ERV1 1 565 0 235 250 0 56 chr5 122128507 122128579 -77501571 - MIR3 SINE MIR -15 193 126 1961 147 7 0 chr5 122128599 122128891 -77501259 - AluSx SINE Alu -12 300 7 198 254 17 51 chr5 122129092 122129151 -77500999 - L2 LINE L2 -12 3260 3204 2547 59 0 0 chr5 122129678 122129983 -77500167 - AluSg SINE Alu -5 305 1 13597 54 3 2 chr5 122130640 122133156 -77496994 - L1PA6 LINE L1 0 6154 3637 229 292 62 0 chr5 122133363 122133459 -77496691 - L1MC/D LINE L1 -2001 5807 5706 357 206 0 55 chr5 122133750 122133823 -77496327 + L2 LINE L2 3245 3313 0 1021 254 117 41 chr5 122133978 122134396 -77495754 + LTR16A LTR ERVL 1 450 0 2299 96 0 3 chr5 122134566 122134869 -77495281 - AluY SINE Alu -9 302 1 490 194 27 18 chr5 122135933 122136081 -77494069 + MLT1J2 LTR MaLR 60 208 -201 614 151 0 0 chr5 122137829 122137922 -77492228 - L1MC1 LINE L1 0 6333 6241 1681 135 10 3 chr5 122137940 122138229 -77491921 - L1MC1 LINE L1 -155 6178 5888 265 292 80 62 chr5 122138269 122138382 -77491768 + MIR3 SINE MIR 78 192 -16 1713 156 6 77 chr5 122139420 122139746 -77490404 - AluJo SINE Alu -9 303 1 3505 179 17 7 chr5 122139770 122140461 -77489689 - L1MB8 LINE L1 -9 6169 5472 1718 98 15 4 chr5 122141152 122141417 -77488733 + MER65A LTR ERV1 178 445 0 535 338 90 5 chr5 122141533 122141755 -77488395 - MIR SINE MIR -13 249 9 576 286 39 43 chr5 122143181 122143412 -77486738 + MIR SINE MIR 13 242 -20 208 147 0 0 chr5 122143914 122143948 -77486202 + (TA)n Simple_repeat Simple_repeat 2 35 0 228 278 28 46 chr5 122144694 122144802 -77485348 + MIR3 SINE MIR 9 114 -94 327 385 16 0 chr5 122145017 122145139 -77485011 - L2 LINE L2 -15 3257 3134 1618 309 117 44 chr5 122145161 122146148 -77484002 - L2 LINE L2 -674 2640 1528 2122 96 3 35 chr5 122146148 122146461 -77483689 + AluSg SINE Alu 1 303 -7 1618 309 117 44 chr5 122146461 122146816 -77483334 - L2 LINE L2 -1786 1528 1200 2678 196 17 75 chr5 122146871 122147596 -77482554 + LTR8 LTR ERV1 1 683 -8 590 288 19 16 chr5 122147857 122148114 -77482036 + L1MC4a LINE L1 5776 6033 -1775 2802 122 6 43 chr5 122148153 122148637 -77481513 + L1PB1 LINE L1 5678 6143 -8 23 33 0 0 chr5 122148637 122148667 -77481483 + AT_rich Low_complexity Low_complexity 1 30 0 317 177 0 0 chr5 122148936 122148998 -77481152 - MER20 DNA MER1_type 0 219 158 674 193 48 64 chr5 122149013 122149200 -77480950 - MER20 DNA MER1_type -35 184 1 21 0 0 0 chr5 122149864 122149885 -77480265 + AT_rich Low_complexity Low_complexity 1 21 0 324 0 0 0 chr5 122150222 122150258 -77479892 + (CA)n Simple_repeat Simple_repeat 2 37 0 920 67 22 15 chr5 122152357 122152492 -77477658 - L1PA5 LINE L1 -1 6153 6018 803 46 0 0 chr5 122152492 122152600 -77477550 + L1PA5 LINE L1 5878 5985 -169 322 164 33 0 chr5 122152856 122152917 -77477233 + MER5A DNA MER1_type 9 71 -118 426 222 167 21 chr5 122153880 122154024 -77476126 + MIR SINE MIR 27 191 -71 1013 104 60 22 chr5 122154181 122154364 -77475786 + L1MB2 LINE L1 5980 6169 -2 181 370 14 27 chr5 122154391 122154464 -77475686 + MER5A DNA MER1_type 100 171 -18 1886 111 77 52 chr5 122154475 122154837 -77475313 + THE1C LTR MaLR 3 373 -2 4347 203 57 46 chr5 122154858 122155417 -77474733 - L1MD1 LINE L1 -11 6300 5749 507 200 29 0 chr5 122155417 122155522 -77474628 - FLAM_C SINE Alu -14 129 22 4347 203 57 46 chr5 122155522 122157324 -77472826 - L1MD1 LINE L1 -562 5749 3890 865 201 0 0 chr5 122157336 122157480 -77472670 - FRAM SINE Alu -11 165 22 305 301 10 0 chr5 122157645 122157748 -77472402 - LTR16C LTR ERVL -29 462 359 984 248 44 37 chr5 122158078 122158414 -77471736 - L1MD1 LINE L1 -5013 1383 1040 2334 89 0 10 chr5 122158414 122158716 -77471434 + AluY SINE Alu 1 299 -12 984 248 44 37 chr5 122158716 122158951 -77471199 - L1MD1 LINE L1 -5356 1040 808 2901 227 58 30 chr5 122158957 122159280 -77470870 - L1ME1 LINE L1 -5 6230 5917 2211 107 3 17 chr5 122159280 122159579 -77470571 - AluSc SINE Alu -10 299 5 2901 227 58 30 chr5 122159579 122160890 -77469260 - L1ME1 LINE L1 -318 5917 4554 286 229 0 0 chr5 122160892 122160953 -77469197 - L1ME LINE L1 -432 5801 5741 588 229 29 11 chr5 122160990 122161165 -77468985 + L1M4 LINE L1 5056 5233 -913 3165 244 34 35 chr5 122161182 122161830 -77468320 - L1ME1 LINE L1 -1677 4538 3890 1901 171 0 7 chr5 122161830 122162128 -77468022 - AluJb SINE Alu -16 296 1 3165 244 34 35 chr5 122162128 122162690 -77467460 - L1ME1 LINE L1 -2325 3890 3329 216 231 141 13 chr5 122162690 122162768 -77467382 + MIR SINE MIR 35 122 -86 319 341 54 8 chr5 122163079 122163208 -77466942 - L1ME LINE L1 -2140 5668 5534 1029 214 42 16 chr5 122165254 122165632 -77464518 - L1ME1 LINE L1 -2909 3306 2919 1383 300 34 44 chr5 122165644 122166445 -77463705 - L1ME1 LINE L1 -5581 815 23 308 314 115 0 chr5 122166565 122166721 -77463429 + MIR3 SINE MIR 24 197 -11 311 324 141 24 chr5 122169831 122170001 -77460149 - MIR3 SINE MIR -3 205 16 187 231 0 77 chr5 122170286 122170338 -77459812 - L3 LINE CR1 -631 946 899 1844 79 34 21 chr5 122170340 122170631 -77459519 - L1MA2 LINE L1 0 6304 6010 244 285 64 76 chr5 122170817 122170989 -77459161 - MIR SINE MIR -86 176 7 22 0 0 0 chr5 122172145 122172167 -77457983 + AT_rich Low_complexity Low_complexity 1 22 0 463 246 112 45 chr5 122172611 122172790 -77457360 + Charlie8 DNA MER1_type 10 200 -2217 251 62 0 0 chr5 122172995 122173027 -77457123 + Charlie8 DNA MER1_type 1391 1422 -995 1469 272 42 5 chr5 122174109 122174536 -77455614 - LTR47B LTR ERVL 0 443 1 391 320 146 21 chr5 122177814 122178142 -77452008 + L2 LINE L2 2434 2802 -512 267 258 150 18 chr5 122178195 122178362 -77451788 + L2 LINE L2 2869 3057 -215 189 0 0 0 chr5 122178808 122178829 -77451321 + (CAAAA)n Simple_repeat Simple_repeat 4 24 0 1895 160 0 0 chr5 122179482 122179770 -77450380 - AluSx SINE Alu -24 288 1 3775 176 45 4 chr5 122179785 122180822 -77449328 - L1MC2 LINE L1 -13 6331 5237 349 246 92 69 chr5 122182782 122183099 -77447051 - L1ME4a LINE L1 0 6121 5798 1971 142 0 0 chr5 122183189 122183471 -77446679 - AluJb SINE Alu -30 282 1 334 243 65 37 chr5 122184408 122184515 -77445635 - MIR SINE MIR -120 142 33 954 263 33 21 chr5 122184559 122184802 -77445348 - MIR SINE MIR -12 250 5 234 0 0 0 chr5 122184846 122184872 -77445278 + (TG)n Simple_repeat Simple_repeat 2 27 0 276 228 38 13 chr5 122185722 122185801 -77444349 + MIR SINE MIR 64 144 -118 581 321 41 16 chr5 122185980 122186226 -77443924 - MIR SINE MIR -10 252 1 1609 202 14 0 chr5 122186286 122186578 -77443572 + AluJo SINE Alu 7 302 -10 403 273 15 30 chr5 122186947 122187079 -77443071 + L1ME4a LINE L1 5684 5813 -308 352 245 20 10 chr5 122187342 122187444 -77442706 + L1ME4a LINE L1 5959 6061 -60 474 250 235 0 chr5 122187564 122187700 -77442450 + MER5A DNA MER1_type 15 182 -7 23 0 0 0 chr5 122188119 122188142 -77442008 + AT_rich Low_complexity Low_complexity 1 23 0 322 254 51 85 chr5 122189673 122189791 -77440359 + L2 LINE L2 3159 3272 0 333 341 79 6 chr5 122190637 122190801 -77439349 + MIR SINE MIR 18 193 -69 24 0 0 0 chr5 122192298 122192322 -77437828 + AT_rich Low_complexity Low_complexity 1 24 0 2655 39 3 0 chr5 122192468 122192778 -77437372 - AluY SINE Alu 0 311 1 331 292 74 27 chr5 122192850 122193028 -77437122 + MIR SINE MIR 67 254 -8 449 232 46 33 chr5 122193629 122193780 -77436370 + MIR SINE MIR 108 260 -2 23 0 0 0 chr5 122195139 122195162 -77434988 + AT_rich Low_complexity Low_complexity 1 23 0 208 289 53 0 chr5 122195608 122195684 -77434466 + L2 LINE L2 3187 3266 -6 576 338 106 22 chr5 122195771 122196235 -77433915 + L2 LINE L2 2349 2851 -463 232 289 62 0 chr5 122196308 122196405 -77433745 + L2 LINE L2 2957 3059 -213 14728 127 30 13 chr5 122196563 122196958 -77433192 + Tigger1 DNA MER2_type 1 388 -2030 2302 96 0 10 chr5 122196958 122197270 -77432880 + AluY SINE Alu 1 309 -2 14728 127 30 13 chr5 122197270 122199251 -77430899 + Tigger1 DNA MER2_type 388 2418 0 198 0 0 0 chr5 122199903 122199925 -77430225 + (TA)n Simple_repeat Simple_repeat 2 23 0 463 308 65 0 chr5 122200962 122201147 -77429003 - MIR SINE MIR -1 261 65 276 227 15 0 chr5 122205519 122205585 -77424565 - MER103 DNA DNA -48 118 52 347 260 227 7 chr5 122206540 122206694 -77423456 + MIR SINE MIR 75 262 0 900 153 0 0 chr5 122206882 122207013 -77423137 + AluJo SINE Alu 6 136 -176 215 333 88 3 chr5 122207081 122207186 -77422964 - MIR SINE MIR -101 107 16 2187 75 3 24 chr5 122207295 122207587 -77422563 + AluSp SINE Alu 10 295 -18 634 176 61 0 chr5 122207748 122207879 -77422271 - L1MC1 LINE L1 -6 6327 6189 1682 142 12 147 chr5 122207880 122208282 -77421868 - MER7A DNA MER2_type 0 346 1 810 178 0 37 chr5 122208285 122208448 -77421702 - L1MC1 LINE L1 -147 6186 6030 22 0 0 0 chr5 122210952 122210974 -77419176 + AT_rich Low_complexity Low_complexity 1 22 0 186 341 59 30 chr5 122211661 122211796 -77418354 + L2 LINE L2 2721 2859 -455 258 370 33 92 chr5 122211831 122212190 -77417960 + L2 LINE L2 2856 3193 -79 811 256 142 44 chr5 122212201 122212545 -77417605 - MLT1K LTR MaLR -164 424 47 416 238 90 37 chr5 122212594 122212998 -77417152 + L1ME1 LINE L1 5422 5891 -275 304 308 0 0 chr5 122213038 122213155 -77416995 + L1MA10 LINE L1 6215 6331 -3 219 193 22 82 chr5 122216602 122216652 -77413498 + CT-rich Low_complexity Low_complexity 4 55 -75 1989 186 37 8 chr5 122216652 122217034 -77413116 - MSTD LTR MaLR 0 396 4 219 193 22 82 chr5 122217034 122217118 -77413032 + CT-rich Low_complexity Low_complexity 55 130 0 606 198 59 63 chr5 122218704 122218942 -77411208 + L1MC4 LINE L1 6467 6703 -1339 415 56 0 0 chr5 122218945 122218999 -77411151 + MADE1 DNA Mariner 27 80 0 339 45 0 0 chr5 122219053 122219097 -77411053 - MADE1 DNA Mariner -36 44 1 1617 228 108 26 chr5 122219109 122219150 -77411000 + L1MC4 LINE L1 6707 6743 -1299 1725 172 26 69 chr5 122219150 122219540 -77410610 + MLT1A2 LTR MaLR 2 374 0 1617 228 108 26 chr5 122219540 122220451 -77409699 + L1MC4 LINE L1 6743 7911 -131 454 228 0 0 chr5 122221018 122221097 -77409053 + Tigger7 DNA MER2_type 2 80 -625 * 978 179 220 0 chr5 122221094 122221317 -77408833 - Tigger7 DNA MER2_type -2140 347 76 * 1930 138 12 12 chr5 122221314 122221633 -77408517 + Tigger7 DNA MER2_type 2242 2560 -27 1833 158 0 7 chr5 122221685 122221988 -77408162 - AluJb SINE Alu -11 301 1 1652 167 78 6 chr5 122222082 122222417 -77407733 + MER47A DNA MER2_type 8 366 0 307 318 0 0 chr5 122223885 122223992 -77406158 - ERVL LTR ERVL -5143 621 515 1416 219 174 36 chr5 122224344 122224991 -77405159 - LTR50 LTR ERVL -19 688 13 196 231 0 0 chr5 122226157 122226196 -77403954 + MIR3 SINE MIR 151 189 -19 183 42 0 0 chr5 122226454 122226478 -77403672 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 24 32 0 0 chr5 122226571 122226602 -77403548 + AT_rich Low_complexity Low_complexity 1 31 0 289 294 47 0 chr5 122228629 122228799 -77401351 + L1M4 LINE L1 3264 3441 -2705 387 235 52 0 chr5 122229002 122229117 -77401033 - L1ME LINE L1 -429 5692 5572 210 196 20 0 chr5 122229470 122229521 -77400629 + (TAA)n Simple_repeat Simple_repeat 1 52 0 1997 57 15 34 chr5 122229617 122229882 -77400268 + AluY SINE Alu 38 297 -14 1162 197 65 20 chr5 122229900 122230194 -77399956 - L1MC2 LINE L1 -5 6339 6033 1900 167 0 7 chr5 122230726 122231019 -77399131 - AluJb SINE Alu -21 291 1 187 337 139 10 chr5 122231130 122231231 -77398919 + L2 LINE L2 3122 3235 -37 768 189 45 96 chr5 122231711 122232002 -77398148 - L1MC2 LINE L1 -1859 5949 5674 606 39 13 0 chr5 122232061 122232138 -77398012 - MADE1 DNA Mariner 0 80 3 267 217 0 0 chr5 122233354 122233414 -77396736 + (TA)n Simple_repeat Simple_repeat 1 60 0 342 0 0 0 chr5 122234634 122234672 -77395478 + (TG)n Simple_repeat Simple_repeat 2 39 0 1156 242 58 29 chr5 122235675 122236051 -77394099 + MLT1B LTR MaLR 4 390 0 235 321 92 18 chr5 122236278 122236387 -77393763 + MIR SINE MIR 21 137 -71 2999 131 30 18 chr5 122236387 122236892 -77393258 - MER39B LTR ERV1 -142 511 1 964 227 81 7 chr5 122237292 122237565 -77392585 - Charlie4a DNA MER1_type -5 503 211 399 192 13 0 chr5 122237885 122237963 -77392187 + Tigger5 DNA MER2_type 2242 2320 -3 365 175 0 0 chr5 122237963 122238026 -77392124 - Tigger5 DNA MER2_type -2259 64 2 24 0 0 0 chr5 122238346 122238370 -77391780 + AT_rich Low_complexity Low_complexity 1 24 0 853 183 0 12 chr5 122238370 122238534 -77391616 - L1PA16 LINE L1 -1 6165 6004 1403 144 83 6 chr5 122239029 122239355 -77390795 - L1PA16 LINE L1 0 6166 5781 472 143 10 0 chr5 122239350 122239449 -77390701 + L1P4 LINE L1 5527 5628 -528 * 369 0 0 0 chr5 122239667 122239708 -77390442 + (TC)n Simple_repeat Simple_repeat 2 42 0 333 100 0 0 chr5 122239709 122239759 -77390391 + (CA)n Simple_repeat Simple_repeat 2 51 0 207 0 0 0 chr5 122240728 122240751 -77389399 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 768 249 99 4 chr5 122241252 122241485 -77388665 - MIR SINE MIR -5 257 3 1893 145 0 23 chr5 122241963 122242273 -77387877 + AluJb SINE Alu 10 312 0 2197 102 0 0 chr5 122243442 122243760 -77386390 + AluY SINE Alu 1 318 0 348 241 112 5 chr5 122243777 122244001 -77386149 + L1ME3A LINE L1 5122 5369 -777 635 263 90 43 chr5 122244115 122244452 -77385698 + L1ME3A LINE L1 5546 5860 -310 195 42 0 0 chr5 122244520 122244544 -77385606 + (TA)n Simple_repeat Simple_repeat 1 24 0 7387 39 2 0 chr5 122244545 122245802 -77384348 - L1PA5 LINE L1 -5 6149 4892 2313 50 0 0 chr5 122245802 122246104 -77384046 + L1P LINE L1 3624 3925 -2221 677 172 204 6 chr5 122248702 122248859 -77381291 - MER5A DNA MER1_type 0 189 2 298 77 0 0 chr5 122248898 122248937 -77381213 - U4 snRNA snRNA -106 39 1 23 92 0 0 chr5 122248960 122249025 -77381125 + AT_rich Low_complexity Low_complexity 1 65 0 2068 113 7 3 chr5 122249046 122249346 -77380804 - AluSx SINE Alu -11 301 1 201 277 0 0 chr5 122249861 122249908 -77380242 - MIR3 SINE MIR -6 202 156 360 312 0 0 chr5 122249917 122250026 -77380124 - L2 LINE L2 -6 3307 3199 268 287 23 11 chr5 122250070 122250157 -77379993 - MIR SINE MIR -123 139 52 301 352 0 16 chr5 122250231 122250359 -77379791 + MER5A DNA MER1_type 64 189 0 23 33 0 0 chr5 122250704 122250734 -77379416 + AT_rich Low_complexity Low_complexity 1 30 0 295 318 16 48 chr5 122251348 122251474 -77378676 - MER91C DNA MER1_type 0 140 19 224 174 130 0 chr5 122251507 122251553 -77378597 - MIR SINE MIR -8 254 203 745 308 54 67 chr5 122252115 122252614 -77377536 - L2 LINE L2 0 3272 2792 1977 129 3 26 chr5 122252614 122252923 -77377227 + AluJo SINE Alu 1 302 -10 745 308 54 67 chr5 122252923 122253055 -77377095 - L2 LINE L2 -480 2792 2660 223 322 28 56 chr5 122253057 122253200 -77376950 - L2 LINE L2 -804 2510 2372 2036 179 49 15 chr5 122253200 122253814 -77376336 - L1MC/D LINE L1 -596 6040 5385 2543 44 7 0 chr5 122253814 122254111 -77376039 - AluY SINE Alu -12 299 1 2036 179 49 15 chr5 122254111 122254350 -77375800 - L1MC/D LINE L1 -1251 5385 5156 1621 120 21 34 chr5 122254408 122254699 -77375451 - Tigger2a DNA MER2_type -147 287 1 1458 258 24 74 chr5 122254700 122255414 -77374736 - L1MC/D LINE L1 -1405 5135 4458 364 201 236 0 chr5 122255420 122255564 -77374586 - L1MC/D LINE L1 -4687 1853 1676 2062 198 21 46 chr5 122255578 122256059 -77374091 - L1MC/D LINE L1 -6054 486 18 238 293 72 36 chr5 122256056 122256223 -77373927 - L1 LINE L1 -2468 4072 3900 * 25 0 0 0 chr5 122256441 122256466 -77373684 + AT_rich Low_complexity Low_complexity 1 25 0 1690 148 23 43 chr5 122257284 122257587 -77372563 - AluJo SINE Alu -14 298 2 181 61 0 61 chr5 122257748 122257781 -77372369 - MER5C DNA MER1_type -6 318 288 479 202 62 16 chr5 122258376 122258505 -77371645 - MER76 LTR ERV -2 686 552 311 284 11 32 chr5 122258508 122258603 -77371547 + MIR SINE MIR 170 262 0 256 248 113 68 chr5 122258667 122258800 -77371350 + L2 LINE L2 3172 3310 -3 615 221 0 0 chr5 122258929 122259042 -77371108 + FLAM_A SINE Alu 3 115 -18 876 222 57 0 chr5 122259257 122259469 -77370681 - LTR16A LTR ERVL 0 450 227 743 245 25 5 chr5 122259483 122259679 -77370471 - MER63A DNA MER1_type 0 210 11 513 257 40 17 chr5 122259669 122259844 -77370306 - LTR16A LTR ERVL -253 197 19 * 4395 188 44 26 chr5 122259994 122261050 -77369100 - L1MC3 LINE L1 -7 7778 6704 26 30 0 0 chr5 122262291 122262324 -77367826 + AT_rich Low_complexity Low_complexity 1 33 0 233 292 21 0 chr5 122262678 122262774 -77367376 - HAL1b LINE L1 -277 1071 974 1826 88 0 0 chr5 122263022 122263250 -77366900 + AluY SINE Alu 1 228 -83 21 71 0 0 chr5 122263310 122263352 -77366798 + AT_rich Low_complexity Low_complexity 1 42 0 255 125 0 0 chr5 122263352 122263400 -77366750 - L1MA3 LINE L1 0 6305 6258 456 296 115 21 chr5 122263439 122263777 -77366373 - HAL1b LINE L1 -466 882 513 447 282 9 32 chr5 122263798 122264014 -77366136 - HAL1b LINE L1 -915 433 223 1682 183 39 34 chr5 122264031 122264090 -77366060 - LTR52 LTR ERVL -2 419 362 2169 141 37 8 chr5 122264090 122264444 -77365706 + THE1B LTR MaLR 1 364 0 1682 183 39 34 chr5 122264444 122264799 -77365351 - LTR52 LTR ERVL -59 362 3 2461 91 0 0 chr5 122266643 122266952 -77363198 - AluSc SINE Alu 0 309 1 12087 104 16 28 chr5 122268798 122271620 -77358530 + L1P3 LINE L1 3 2850 -3611 371 278 32 32 chr5 122271882 122272008 -77358142 - MIR SINE MIR -56 206 81 384 178 151 0 chr5 122273160 122273233 -77356917 + L2 LINE L2 3205 3288 -25 234 329 13 20 chr5 122273574 122273723 -77356427 + (TA)n Simple_repeat Simple_repeat 2 149 0 180 0 0 0 chr5 122274102 122274122 -77356028 + (GGGTG)n Simple_repeat Simple_repeat 4 23 0 638 270 112 25 chr5 122274324 122274691 -77355459 - MER113 DNA MER1_type? -87 434 36 2515 84 50 0 chr5 122274801 122275160 -77354990 - MER51B LTR ERV1 0 377 1 399 123 0 0 chr5 122275295 122275352 -77354798 + AluS SINE Alu 6 62 -240 1981 118 0 3 chr5 122275360 122275648 -77354502 - AluSq SINE Alu -18 295 9 1468 149 5 0 chr5 122275656 122275877 -77354273 + AluJb SINE Alu 65 286 -26 397 285 44 0 chr5 122276624 122276782 -77353368 + MER103 DNA DNA 2 166 0 189 394 32 59 chr5 122277214 122277435 -77352715 + L2 LINE L2 2573 2787 -527 243 286 39 26 chr5 122278336 122278413 -77351737 + L2 LINE L2 3186 3263 -9 461 261 5 92 chr5 122278592 122278776 -77351374 - MIR SINE MIR -45 217 50 437 171 0 13 chr5 122282495 122282571 -77347579 - Tigger5 DNA MER2_type 0 2323 2249 * 1134 208 20 0 chr5 122282569 122282771 -77347379 - Tigger5 DNA MER2_type -2085 238 33 2257 229 34 2 chr5 122282895 122283341 -77346809 + L1M2 LINE L1 2 461 -6388 * 5789 167 20 14 chr5 122283338 122284995 -77345155 + L1MA4A LINE L1 4623 6287 -16 1121 178 5 5 chr5 122284995 122285197 -77344953 + Tigger5 DNA MER2_type 2122 2323 0 3378 245 60 15 chr5 122285197 122286390 -77343760 - L1M4 LINE L1 -876 5270 4025 2186 239 96 17 chr5 122286496 122287444 -77342706 - L1M4 LINE L1 -1099 5047 4025 406 263 201 34 chr5 122288032 122288211 -77341939 - MIR SINE MIR 0 262 54 2603 128 19 12 chr5 122288329 122288752 -77341398 - MSTA LTR MaLR -2 426 1 999 191 0 0 chr5 122289279 122289452 -77340698 - MER2 DNA MER2_type -172 173 1 5439 168 32 32 chr5 122289538 122290603 -77339547 - L1MA9 LINE L1 0 6312 5249 2252 118 35 0 chr5 122290603 122290951 -77339199 - MER46B DNA MER2_type 0 236 2 5439 168 32 32 chr5 122290951 122291353 -77338797 - L1MA9 LINE L1 -1063 5249 4848 4139 176 45 15 chr5 122291513 122292125 -77338025 - L1PB4 LINE L1 -2 6856 6264 236 91 23 0 chr5 122292125 122292169 -77337981 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 2248 82 4 0 chr5 122292170 122292451 -77337699 - AluSg SINE Alu -26 284 3 4139 176 45 15 chr5 122292451 122293403 -77336747 - L1PB4 LINE L1 -593 6265 5235 * 26453 102 62 70 chr5 122293398 122295341 -77334809 - L1PA7 LINE L1 -2 6152 4195 2458 78 0 0 chr5 122295341 122295647 -77334503 - AluY SINE Alu -5 306 1 26453 102 62 70 chr5 122295647 122299905 -77330245 - L1PA7 LINE L1 -1959 4195 12 8609 224 38 36 chr5 122299913 122300055 -77330095 - L1PB4 LINE L1 -1597 5251 5111 1997 118 3 38 chr5 122300055 122300368 -77329782 + AluSx SINE Alu 1 302 -10 8609 224 38 36 chr5 122300368 122301348 -77328802 - L1PB4 LINE L1 -1737 5111 4134 2594 138 41 5 chr5 122301348 122301761 -77328389 - MSTA LTR MaLR 0 428 1 8609 224 38 36 chr5 122301761 122303150 -77327000 - L1PB4 LINE L1 -2714 4134 2748 1938 115 17 14 chr5 122303150 122303438 -77326712 - AluSc SINE Alu -12 297 9 8609 224 38 36 chr5 122303438 122305360 -77324790 - L1PB4 LINE L1 -4100 2748 892 4409 275 85 51 chr5 122305555 122307890 -77322260 - L1M2 LINE L1 -4353 2496 83 22 35 0 0 chr5 122308243 122308272 -77321878 + AT_rich Low_complexity Low_complexity 1 29 0 1274 14 0 0 chr5 122309141 122309283 -77320867 - AluYb8 SINE Alu -4 314 173 1466 222 115 15 chr5 122309283 122309743 -77320407 - L1ME2 LINE L1 -35 6129 5624 320 303 83 76 chr5 122309740 122309893 -77320257 - L1ME LINE L1 -5779 291 134 * 2117 123 0 13 chr5 122309893 122310202 -77319948 - AluSx SINE Alu -7 305 1 320 303 83 76 chr5 122310202 122310325 -77319825 - L1ME LINE L1 -5936 134 13 272 337 59 30 chr5 122310337 122310506 -77319644 + L2 LINE L2 2688 2861 -453 686 313 103 18 chr5 122310536 122310875 -77319275 + L2 LINE L2 2946 3313 0 1589 176 0 55 chr5 122312046 122312353 -77317797 - AluJo SINE Alu -19 293 4 23 33 0 0 chr5 122312362 122312392 -77317758 + AT_rich Low_complexity Low_complexity 1 30 0 357 234 60 109 chr5 122312412 122312475 -77317675 - L1ME1 LINE L1 -43 6123 6058 3015 124 11 6 chr5 122312475 122312944 -77317206 + L1PB2 LINE L1 5678 6148 -3 357 234 60 109 chr5 122312944 122313064 -77317086 - L1ME1 LINE L1 -108 6058 5949 388 180 4 53 chr5 122313164 122313278 -77316872 - L1ME1 LINE L1 -396 5770 5674 284 94 19 0 chr5 122313282 122313335 -77316815 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 10623 55 16 1 chr5 122313344 122315515 -77314635 - L1PA6 LINE L1 0 6154 3960 18788 75 12 2 chr5 122315591 122318169 -77311981 - L1PA6 LINE L1 -2166 3980 1377 9758 114 0 2 chr5 122318169 122320297 -77309853 + L1PA5 LINE L1 4031 6146 -8 339 235 176 0 chr5 122320348 122320450 -77309700 - MER112 DNA MER1_type -140 120 1 1156 260 46 5 chr5 122321118 122321491 -77308659 - L1MC4 LINE L1 -455 7587 7200 394 243 0 18 chr5 122321504 122321616 -77308534 - L1MC4 LINE L1 -10 8029 7883 273 170 0 19 chr5 122321624 122321677 -77308473 + MIR SINE MIR 125 176 -86 229 152 22 56 chr5 122321700 122321878 -77308272 + (TA)n Simple_repeat Simple_repeat 1 172 0 238 226 0 24 chr5 122321879 122321963 -77308187 + (TATAA)n Simple_repeat Simple_repeat 3 84 0 240 142 23 62 chr5 122321969 122322145 -77308005 + (TA)n Simple_repeat Simple_repeat 2 170 0 514 295 55 20 chr5 122322415 122322615 -77307535 - L2 LINE L2 -4 3309 3103 402 193 46 73 chr5 122323374 122323483 -77306667 - MIR SINE MIR -71 191 86 366 80 0 0 chr5 122323627 122323677 -77306473 + (TATG)n Simple_repeat Simple_repeat 4 53 0 192 256 0 0 chr5 122324323 122324366 -77305784 - L2 LINE L2 -666 2648 2606 296 264 47 66 chr5 122324529 122324635 -77305515 - MIR SINE MIR -85 177 74 33 73 0 0 chr5 122325953 122326021 -77304129 + AT_rich Low_complexity Low_complexity 1 68 0 2300 61 7 3 chr5 122326870 122327166 -77302984 - AluY SINE Alu -14 297 1 1981 120 46 12 chr5 122327768 122328094 -77302056 + MER44D DNA MER2_type 3 609 0 737 263 42 5 chr5 122328097 122328287 -77301863 + MIR SINE MIR 64 260 -2 496 343 19 24 chr5 122331122 122331329 -77298821 - MIR SINE MIR -52 210 5 4533 168 36 73 chr5 122332011 122334166 -77295984 - L1MA9 LINE L1 -36 6276 4195 269 223 63 144 chr5 122334405 122334724 -77295426 - L1ME4a LINE L1 -222 5899 5607 22 0 0 0 chr5 122335140 122335162 -77294988 + AT_rich Low_complexity Low_complexity 1 22 0 202 324 0 27 chr5 122336016 122336090 -77294060 - L2 LINE L2 -4 3309 3238 300 277 136 34 chr5 122336257 122336434 -77293716 - L2 LINE L2 -944 2370 2176 574 275 54 6 chr5 122336605 122336772 -77293378 - MIR SINE MIR -76 186 12 191 188 0 0 chr5 122336787 122336819 -77293331 - L2 LINE L2 -1391 1923 1892 1402 307 126 33 chr5 122336831 122337798 -77292352 - L2 LINE L2 -1298 2016 960 2143 115 15 59 chr5 122337850 122338242 -77291908 + THE1C LTR MaLR 1 375 0 21630 33 3 0 chr5 122338709 122341689 -77288461 - L1P1 LINE L1 -432 5723 2736 275 264 11 11 chr5 122342947 122343034 -77287116 - MIR SINE MIR -1 261 175 276 289 24 24 chr5 122345240 122345323 -77284827 + MIR SINE MIR 66 148 -60 313 313 46 8 chr5 122345480 122345611 -77284539 + MIR SINE MIR 87 222 -40 26 0 0 0 chr5 122346402 122346428 -77283722 + AT_rich Low_complexity Low_complexity 1 26 0 1290 259 150 19 chr5 122346453 122346925 -77283225 - MLT1H LTR MaLR -3 546 13 682 222 33 11 chr5 122346945 122347172 -77282978 - L1ME4a LINE L1 -593 5577 5346 350 139 47 0 chr5 122347429 122347515 -77282635 + CT-rich Low_complexity Low_complexity 2 91 0 576 244 8 8 chr5 122347523 122347654 -77282496 - FRAM SINE Alu -44 132 2 854 313 73 9 chr5 122348068 122348467 -77281683 + L2 LINE L2 2632 3057 -256 21 0 0 0 chr5 122349298 122349319 -77280831 + AT_rich Low_complexity Low_complexity 1 21 0 414 314 51 0 chr5 122350224 122350380 -77279770 + MIR SINE MIR 88 251 -11 2288 153 68 19 chr5 122350441 122350866 -77279284 - Tigger2 DNA MER2_type 0 2718 2273 248 196 0 54 chr5 122350856 122350912 -77279238 - Tigger2 DNA MER2_type -2649 69 17 * 828 120 0 0 chr5 122352321 122352438 -77277712 + AluSq/x SINE Alu 1 117 -196 549 249 18 24 chr5 122352555 122352720 -77277430 - MLT1A2 LTR MaLR -207 167 4 191 250 0 42 chr5 122353083 122353131 -77277019 - MIR SINE MIR -131 77 32 29325 108 16 16 chr5 122353296 122358789 -77271361 + L1PA7 LINE L1 663 6148 -6 238 25 25 25 chr5 122360618 122360658 -77269492 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 1382 290 103 19 chr5 122360701 122361505 -77268645 - L2 LINE L2 0 3313 2432 462 297 91 5 chr5 122361840 122362059 -77268091 + L2 LINE L2 2986 3223 -90 3772 147 24 9 chr5 122362176 122362843 -77267307 + L1MB3 LINE L1 5500 6176 -7 1409 178 27 17 chr5 122362981 122363274 -77266876 - AluSx SINE Alu -16 296 1 26 0 0 0 chr5 122363552 122363578 -77266572 + AT_rich Low_complexity Low_complexity 1 26 0 441 229 78 61 chr5 122363628 122363859 -77266291 - LTR41 LTR ERVL -8 765 531 290 321 138 25 chr5 122364214 122364410 -77265740 + L2 LINE L2 2555 2772 -542 211 256 0 0 chr5 122364753 122364796 -77265354 + L2 LINE L2 3271 3313 0 239 222 22 0 chr5 122365127 122365172 -77264978 - L2 LINE L2 -18 3295 3250 23 0 0 0 chr5 122365388 122365411 -77264739 + AT_rich Low_complexity Low_complexity 1 23 0 198 282 37 112 chr5 122365943 122366131 -77264019 - L2 LINE L2 -26 3287 3114 393 327 42 54 chr5 122366134 122366302 -77263848 - MIR3 SINE MIR -28 180 15 507 154 143 0 chr5 122417143 122417234 -77212916 - U6 snRNA snRNA 0 107 4 1569 179 26 13 chr5 122417245 122417618 -77212532 - AluJb SINE Alu 0 377 1 180 293 35 0 chr5 122417712 122417770 -77212380 - MIR SINE MIR 0 262 203 305 182 36 0 chr5 122417968 122418023 -77212127 - FLAM_A SINE Alu -47 86 30 358 307 35 35 chr5 122418664 122418778 -77211372 + MLT1K LTR MaLR 111 224 -364 261 196 0 0 chr5 122418794 122418840 -77211310 - MLT1L LTR MaLR -233 382 337 343 193 36 12 chr5 122419202 122419285 -77210865 + MLT1K LTR MaLR 494 578 -10 21 0 0 0 chr5 122419641 122419662 -77210488 + AT_rich Low_complexity Low_complexity 1 21 0 10598 165 115 14 chr5 122419804 122422845 -77207305 + L1PBa LINE L1 346 3693 -3169 296 115 98 0 chr5 122426490 122426551 -77203599 - LTR54 LTR ERV1 -48 462 396 1982 218 92 32 chr5 122426818 122427588 -77202562 - L1ME2 LINE L1 -11 6153 5338 377 98 0 0 chr5 122429823 122429874 -77200276 + MSTA-int LTR MaLR 868 918 -662 260 118 0 212 chr5 122429881 122429966 -77200184 + MSTA-int LTR MaLR 714 780 -871 * 4121 127 6 12 chr5 122429961 122430622 -77199528 + MSTA-int LTR MaLR 923 1579 -1 1041 132 162 17 chr5 122430623 122430858 -77199292 + MSTA LTR MaLR 1 269 -159 4372 189 16 12 chr5 122430858 122431716 -77198434 + MSTA-int LTR MaLR 790 1651 0 2359 182 44 0 chr5 122431718 122432125 -77198025 + MSTA LTR MaLR 3 427 -1 325 102 0 0 chr5 122432157 122432206 -77197944 - MADE1 DNA Mariner -30 50 2 312 361 73 10 chr5 122432382 122432587 -77197563 + MIR SINE MIR 44 261 -1 1603 128 28 7 chr5 122432750 122433040 -77197110 + L1MA3 LINE L1 6010 6305 0 21 57 0 0 chr5 122433065 122433100 -77197050 + AT_rich Low_complexity Low_complexity 1 35 0 463 318 92 21 chr5 122433125 122433408 -77196742 - MLT1I LTR MaLR -32 377 75 561 192 103 32 chr5 122434074 122434230 -77195920 + MLT1B LTR MaLR 1 167 -223 756 145 8 8 chr5 122434236 122434353 -77195797 + FLAM_C SINE Alu 1 117 -16 470 311 82 5 chr5 122434498 122434694 -77195456 - L2 LINE L2 -1061 2253 2043 647 194 0 87 chr5 122435031 122435227 -77194923 + MLT1A2 LTR MaLR 1 179 -195 975 282 124 22 chr5 122435240 122435698 -77194452 - MLT1D LTR MaLR 0 505 1 24 32 0 0 chr5 122438509 122438540 -77191610 + AT_rich Low_complexity Low_complexity 1 31 0 2052 153 8 33 chr5 122438556 122438954 -77191196 - MLT1B LTR MaLR -2 388 1 387 271 90 15 chr5 122438955 122439088 -77191062 + L2 LINE L2 3171 3313 0 1678 196 10 16 chr5 122439921 122440233 -77189917 + AluJo SINE Alu 1 310 -2 2289 90 0 10 chr5 122440477 122440776 -77189374 + AluSq SINE Alu 13 308 -5 278 307 13 0 chr5 122440781 122440856 -77189294 + L2 LINE L2 3189 3264 -8 1020 265 84 68 chr5 122442066 122442620 -77187530 + MLT1F1 LTR MaLR 1 564 -3 245 239 0 14 chr5 122442622 122442693 -77187457 + LTR67 LTR ERVL 474 543 -14 216 194 139 56 chr5 122442940 122443012 -77187138 + L3 LINE CR1 373 450 -1127 1092 155 17 9 chr5 122444115 122444347 -77185803 + L1MA8 LINE L1 5993 6226 -65 622 278 108 29 chr5 122444548 122444825 -77185325 + ERVL LTR ERVL 2291 2589 -3175 676 317 163 12 chr5 122445003 122445547 -77184603 - L2 LINE L2 0 3313 2690 322 259 27 9 chr5 122447182 122447294 -77182856 - L1MEc LINE L1 -4577 1819 1706 * 576 259 86 0 chr5 122447286 122447506 -77182644 - L1MEc LINE L1 -4766 1660 1422 289 274 57 0 chr5 122448490 122448614 -77181536 - L1MEc LINE L1 -4860 1536 1406 355 344 81 27 chr5 122448716 122448902 -77181248 + HAL1b LINE L1 397 592 -756 534 335 5 11 chr5 122451243 122451428 -77178722 - MIR3 SINE MIR -5 203 20 1867 216 87 41 chr5 122452018 122452542 -77177608 + MER45B DNA AcHobo 1 549 -491 1833 105 80 43 chr5 122452542 122452893 -77177257 - THE1B LTR MaLR 0 364 1 2043 155 53 5 chr5 122452894 122453308 -77176842 + MER45B DNA AcHobo 550 983 -57 608 354 78 16 chr5 122453652 122454022 -77176128 - L2 LINE L2 0 3313 2921 929 244 82 53 chr5 122454031 122454435 -77175715 + MLT1C LTR MaLR 1 421 -46 1355 180 32 122 chr5 122454435 122454836 -77175314 + MLT1A1 LTR MaLR 1 365 0 929 244 82 53 chr5 122454836 122454885 -77175265 + MLT1C LTR MaLR 421 467 0 561 329 115 53 chr5 122454885 122455483 -77174667 - L2 LINE L2 -398 2916 2282 2143 152 18 28 chr5 122458346 122458740 -77171410 - MLT1B LTR MaLR 0 390 1 360 303 85 38 chr5 122458765 122458976 -77171174 - L2 LINE L2 -18 3295 3075 318 361 118 14 chr5 122459058 122459338 -77170812 - L2 LINE L2 -400 2914 2606 416 289 77 26 chr5 122460193 122460349 -77169801 - MIR3 SINE MIR -30 178 15 325 174 20 60 chr5 122461772 122461921 -77168229 + (TA)n Simple_repeat Simple_repeat 1 143 0 270 257 0 0 chr5 122462052 122462122 -77168028 + (TA)n Simple_repeat Simple_repeat 1 70 0 1140 165 5 5 chr5 122462362 122462574 -77167576 + L1MA7 LINE L1 5856 6067 -224 675 147 80 20 chr5 122462575 122462725 -77167425 + L1MA7 LINE L1 6127 6285 -6 230 403 22 17 chr5 122462792 122462973 -77167177 + L2 LINE L2 870 1051 -2263 271 292 36 36 chr5 122463807 122463944 -77166206 - HAL1 LINE L1 -600 1907 1771 602 253 11 0 chr5 122463965 122464151 -77165999 - HAL1 LINE L1 -810 1697 1510 40 79 0 0 chr5 122464190 122464279 -77165871 + AT_rich Low_complexity Low_complexity 1 89 0 724 255 69 41 chr5 122464279 122465105 -77165045 - HAL1 LINE L1 -1050 1457 557 1699 153 28 22 chr5 122465228 122465548 -77164602 - L1MC1 LINE L1 -8 6325 6004 1275 165 8 4 chr5 122465799 122466054 -77164096 - L1MA5 LINE L1 -58 6242 5987 * 2999 103 38 10 chr5 122466052 122466555 -77163595 + L1MA5 LINE L1 5433 5949 -351 284 346 144 24 chr5 122466561 122466902 -77163248 + L2 LINE L2 1875 2256 -1058 1144 234 36 61 chr5 122466902 122467295 -77162855 + MLT1B LTR MaLR 1 383 -7 1369 86 109 5 chr5 122467409 122467630 -77162520 - L1PA11 LINE L1 0 6174 5931 517 121 0 0 chr5 122467632 122467715 -77162435 + L1PA11 LINE L1 5867 5949 -219 482 349 53 19 chr5 122467756 122468074 -77162076 + L2 LINE L2 2377 2705 -609 1909 144 18 0 chr5 122468083 122468387 -77161763 + AluJb SINE Alu 1 309 0 1303 161 0 69 chr5 122470176 122470398 -77159752 - AluSx SINE Alu -70 242 39 2226 103 0 0 chr5 122470398 122470688 -77159462 + AluSx SINE Alu 5 294 -18 1303 161 0 69 chr5 122470688 122470725 -77159425 - AluSx SINE Alu -273 39 1 190 98 73 0 chr5 122470768 122470809 -77159341 + GA-rich Low_complexity Low_complexity 2 45 0 212 250 0 45 chr5 122471735 122471823 -77158327 + CT-rich Low_complexity Low_complexity 1 84 0 312 258 62 39 chr5 122472169 122472297 -77157853 + L2 LINE L2 3182 3312 -1 831 257 18 37 chr5 122472374 122472646 -77157504 + MLT2B1 LTR ERVL 198 464 -56 238 137 78 0 chr5 122472706 122472757 -77157393 + MLT2B1 LTR ERVL 461 515 0 257 314 23 0 chr5 122473190 122473276 -77156874 + L2 LINE L2 3185 3272 0 2039 147 10 70 chr5 122474574 122474989 -77155161 + MLT1B LTR MaLR 1 390 0 1382 186 49 16 chr5 122475149 122475456 -77154694 + MLT1C LTR MaLR 3 319 -148 669 174 6 93 chr5 122475556 122475717 -77154433 + MLT1C LTR MaLR 320 466 -1 23 0 0 0 chr5 122476096 122476119 -77154031 + AT_rich Low_complexity Low_complexity 1 23 0 2319 108 0 0 chr5 122476224 122476531 -77153619 - AluSq SINE Alu -6 307 1 796 250 145 4 chr5 122476861 122477109 -77153041 - LTR40b LTR ERVL -2 460 178 209 83 28 0 chr5 122477557 122477593 -77152557 + (TA)n Simple_repeat Simple_repeat 2 38 0 198 103 0 0 chr5 122477724 122477753 -77152397 + (TTCCC)n Simple_repeat Simple_repeat 1 29 0 232 204 19 0 chr5 122477759 122477813 -77152337 + T-rich Low_complexity Low_complexity 5 59 0 832 83 58 8 chr5 122477831 122477952 -77152198 + L1PB1 LINE L1 6022 6148 -3 805 221 136 0 chr5 122478224 122478437 -77151713 - LTR40a LTR ERVL -275 244 3 2118 131 3 0 chr5 122478865 122479163 -77150987 - AluSg SINE Alu -11 299 1 29 60 0 0 chr5 122480940 122480990 -77149160 + AT_rich Low_complexity Low_complexity 1 50 0 461 283 26 7 chr5 122481351 122481503 -77148647 + MIR SINE MIR 30 184 -78 1833 249 3 6 chr5 122481647 122482013 -77148137 + MLT1A1 LTR MaLR 1 365 0 2615 186 96 16 chr5 122482013 122482659 -77147491 + MLT1A1-int LTR MaLR 1 770 -965 2132 204 16 131 chr5 122482668 122483361 -77146789 + MLT1A1-int LTR MaLR 1095 1707 -28 2011 170 27 16 chr5 122483530 122483906 -77146244 - L1PB4 LINE L1 0 6156 5777 188 101 50 59 chr5 122483912 122484031 -77146119 + (TA)n Simple_repeat Simple_repeat 1 118 0 237 178 33 44 chr5 122484046 122484136 -77146014 + (TA)n Simple_repeat Simple_repeat 1 89 0 437 184 13 4 chr5 122484151 122484251 -77145899 - L1P4 LINE L1 -354 5814 5711 7158 200 13 19 chr5 122484351 122485691 -77144459 - L1P4 LINE L1 -723 5433 4105 2335 109 0 0 chr5 122485691 122485994 -77144156 + AluSq SINE Alu 1 303 -10 7158 200 13 19 chr5 122485994 122486310 -77143840 - L1P4 LINE L1 -2051 4105 3789 1959 159 133 18 chr5 122486310 122486694 -77143456 + MSTA LTR MaLR 1 428 0 7907 141 31 39 chr5 122486696 122488048 -77142102 + MSTA-int LTR MaLR 3 1343 -237 981 198 111 35 chr5 122488148 122488426 -77141724 + MSTA LTR MaLR 44 318 -57 7402 228 30 10 chr5 122488436 122489042 -77141108 - L1 LINE L1 -3048 3800 3208 369 0 0 0 chr5 122489042 122489083 -77141067 + (TG)n Simple_repeat Simple_repeat 1 41 0 7402 228 30 10 chr5 122489083 122491161 -77138989 - L1 LINE L1 -3640 3208 1060 2075 137 144 21 chr5 122491914 122492295 -77137855 - MSTA LTR MaLR 0 428 1 1229 303 75 10 chr5 122492505 122492918 -77137232 - L1 LINE L1 -6399 450 11 23 54 0 0 chr5 122493416 122493453 -77136697 + AT_rich Low_complexity Low_complexity 1 37 0 269 295 82 41 chr5 122493776 122493898 -77136252 + HAL1 LINE L1 4 130 -2377 397 319 54 28 chr5 122494510 122494867 -77135283 + HAL1 LINE L1 841 1263 -1244 14216 192 48 19 chr5 122494899 122498989 -77131161 + L1MA2 LINE L1 17 3990 -3733 2105 150 0 0 chr5 122498989 122499295 -77130855 + AluSx SINE Alu 3 308 -4 14216 192 48 19 chr5 122499295 122500113 -77130037 + L1MA2 LINE L1 3990 4783 -2940 5722 158 38 29 chr5 122500113 122501175 -77128975 + MER11C LTR ERVK 1 1071 0 14216 192 48 19 chr5 122501175 122503492 -77126658 + L1MA2 LINE L1 4783 7723 0 34 24 0 0 chr5 122503493 122503534 -77126616 + AT_rich Low_complexity Low_complexity 1 41 0 472 313 104 14 chr5 122503569 122504001 -77126149 + HAL1 LINE L1 1340 1810 -697 22 0 0 0 chr5 122504184 122504206 -77125944 + AT_rich Low_complexity Low_complexity 1 22 0 275 294 131 35 chr5 122504500 122504813 -77125337 + HAL1 LINE L1 2165 2507 0 2343 174 59 32 chr5 122504874 122505397 -77124753 - MER61A-int LTR ERV1 -4679 538 2 1060 125 85 25 chr5 122505398 122505598 -77124552 - MER61A LTR ERV1 0 343 132 2250 138 67 23 chr5 122511048 122511484 -77118666 + MLT1C LTR MaLR 8 462 -5 253 173 19 19 chr5 122511515 122511567 -77118583 + L2 LINE L2 3195 3246 -67 234 0 0 0 chr5 122514159 122514185 -77115965 + (A)n Simple_repeat Simple_repeat 1 26 0 578 270 145 0 chr5 122516278 122516437 -77113713 + MER5A DNA MER1_type 8 189 0 263 325 107 6 chr5 122516813 122516982 -77113168 + MIR SINE MIR 47 232 -30 207 162 0 0 chr5 122517629 122517666 -77112484 + A-rich Low_complexity Low_complexity 1 37 0 2332 86 7 0 chr5 122518115 122518416 -77111734 + AluSx SINE Alu 1 303 -9 33 0 0 0 chr5 122518416 122518449 -77111701 + AT_rich Low_complexity Low_complexity 1 33 0 629 295 92 10 chr5 122522820 122523027 -77107123 + MIR SINE MIR 2 225 -37 2111 111 0 20 chr5 122523284 122523581 -77106569 + AluSq SINE Alu 1 291 -22 202 331 114 33 chr5 122523723 122523907 -77106243 - MIR3 SINE MIR -7 201 3 1981 136 3 7 chr5 122524168 122524463 -77105687 + AluSq SINE Alu 1 294 -19 6477 207 17 8 chr5 122526036 122527524 -77102626 + L1PB1 LINE L1 3067 4574 -1572 1776 105 6 9 chr5 122527515 122528283 -77101867 + L1PB1 LINE L1 5284 6143 -8 * 23 54 0 0 chr5 122528412 122528449 -77101701 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr5 122528858 122528885 -77101265 + AT_rich Low_complexity Low_complexity 1 27 0 211 226 19 38 chr5 122528946 122528999 -77101151 - L3 LINE CR1 -2 1575 1524 1605 156 28 28 chr5 122529178 122529467 -77100683 - AluJb SINE Alu -23 289 1 204 349 81 0 chr5 122529616 122529702 -77100448 - MIR SINE MIR -86 122 30 1522 199 30 7 chr5 122530146 122530448 -77099702 - L1MC1 LINE L1 -6 6607 6299 4000 169 20 8 chr5 122530456 122531316 -77098834 - L1MC1 LINE L1 -385 6228 5366 6806 153 117 49 chr5 122531343 122531563 -77098587 - L1MC1 LINE L1 -4462 1964 1760 548 178 129 0 chr5 122531563 122531664 -77098486 - FLAM_A SINE Alu -19 114 1 6806 153 117 49 chr5 122531664 122531764 -77098386 - L1MC1 LINE L1 -4666 1760 1668 1727 100 29 18 chr5 122531764 122532043 -77098107 - L1MA2 LINE L1 0 6304 6023 6806 153 117 49 chr5 122532043 122532389 -77097761 - L1MC1 LINE L1 -4758 1668 1347 216 0 0 0 chr5 122532389 122532413 -77097737 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6806 153 117 49 chr5 122532413 122533484 -77096666 - L1MC1 LINE L1 -5079 1347 20 278 333 0 0 chr5 122533583 122533655 -77096495 - MIR SINE MIR -105 103 32 7655 22 0 0 chr5 122533679 122534946 -77095204 - L1PA3 LINE L1 -3 6152 4884 9246 39 1 0 chr5 122534946 122536091 -77094059 + L1P LINE L1 1404 2549 -3597 24 0 0 0 chr5 122536934 122536958 -77093192 + AT_rich Low_complexity Low_complexity 1 24 0 198 258 0 0 chr5 122537311 122537373 -77092777 + (TA)n Simple_repeat Simple_repeat 2 63 0 275 282 0 0 chr5 122537384 122537455 -77092695 + (TATG)n Simple_repeat Simple_repeat 4 74 0 21 0 0 0 chr5 122537489 122537510 -77092640 + AT_rich Low_complexity Low_complexity 1 21 0 2298 112 0 3 chr5 122538158 122538470 -77091680 + AluSq SINE Alu 1 311 -2 1927 142 17 0 chr5 122539319 122539607 -77090543 - AluSg SINE Alu -17 293 1 221 328 103 0 chr5 122539658 122539767 -77090383 - L2 LINE L2 0 3313 3193 313 338 109 40 chr5 122539767 122539968 -77090182 + MIR SINE MIR 3 217 -45 1508 220 39 39 chr5 122541670 122542052 -77088098 - MSTD LTR MaLR -14 382 1 246 105 0 0 chr5 122542094 122542132 -77088018 + (TA)n Simple_repeat Simple_repeat 1 38 0 435 295 18 0 chr5 122542416 122542528 -77087622 + L2 LINE L2 2482 2595 -719 272 131 33 0 chr5 122542932 122542982 -77087168 + (TATATG)n Simple_repeat Simple_repeat 2 56 -8 1741 156 0 99 chr5 122542982 122543367 -77086783 - MER7A DNA MER2_type 0 346 2 272 131 33 0 chr5 122543367 122543377 -77086773 + (TATATG)n Simple_repeat Simple_repeat 56 64 0 209 195 0 0 chr5 122543547 122543588 -77086562 + (CA)n Simple_repeat Simple_repeat 2 42 0 316 295 102 8 chr5 122543663 122543840 -77086310 + MIR SINE MIR 1 232 -30 513 0 0 0 chr5 122544284 122544341 -77085809 + (TG)n Simple_repeat Simple_repeat 2 58 0 268 256 209 16 chr5 122546263 122546392 -77083758 - MIR SINE MIR -3 259 106 25 31 0 0 chr5 122546925 122546957 -77083193 + AT_rich Low_complexity Low_complexity 1 32 0 25 65 0 0 chr5 122547213 122547259 -77082891 + AT_rich Low_complexity Low_complexity 1 46 0 1793 110 0 4 chr5 122547260 122547515 -77082635 + AluSc SINE Alu 35 288 -21 356 71 18 0 chr5 122547515 122547571 -77082579 + (TA)n Simple_repeat Simple_repeat 1 57 0 21 0 0 0 chr5 122547998 122548019 -77082131 + AT_rich Low_complexity Low_complexity 1 21 0 2182 93 0 13 chr5 122548338 122548649 -77081501 - AluSc SINE Alu -2 307 1 315 246 53 9 chr5 122548898 122549012 -77081138 - L1ME4a LINE L1 -4 6117 5999 1393 153 70 95 chr5 122550692 122551092 -77079058 + MLT1B LTR MaLR 1 390 0 909 232 150 18 chr5 122551223 122551564 -77078586 + MLT1D LTR MaLR 120 505 0 303 254 175 44 chr5 122551564 122551816 -77078334 - L1M4 LINE L1 -2202 3944 3660 3040 124 53 90 chr5 122552650 122553270 -77076880 + LTR26 LTR ERV1 1 597 -6 222 209 0 0 chr5 122553687 122553730 -77076420 + (TAGG)n Simple_repeat Simple_repeat 1 43 0 24 0 0 0 chr5 122554114 122554138 -77076012 + AT_rich Low_complexity Low_complexity 1 24 0 2076 128 3 3 chr5 122554498 122554803 -77075347 - AluSg SINE Alu -5 305 1 271 279 0 15 chr5 122555218 122555286 -77074864 - L2 LINE L2 -5 3308 3242 21 0 0 0 chr5 122555754 122555775 -77074375 + AT_rich Low_complexity Low_complexity 1 21 0 298 257 86 64 chr5 122556065 122556163 -77073987 + L2 LINE L2 3171 3274 -39 2150 183 34 7 chr5 122556163 122556578 -77073572 - MSTB LTR MaLR 0 426 1 298 257 86 64 chr5 122556578 122556619 -77073531 + L2 LINE L2 3274 3313 0 770 295 63 66 chr5 122556858 122557539 -77072611 - L1ME LINE L1 -5118 952 274 314 343 83 50 chr5 122557647 122558043 -77072107 - L1ME LINE L1 -5610 460 52 24 53 0 0 chr5 122560150 122560188 -77069962 + AT_rich Low_complexity Low_complexity 1 38 0 23 68 0 0 chr5 122560919 122560963 -77069187 + AT_rich Low_complexity Low_complexity 1 44 0 483 227 92 43 chr5 122563135 122563342 -77066808 + L1ME3A LINE L1 5896 6112 -58 1531 101 0 10 chr5 122564318 122564525 -77065625 + AluSg/x SINE Alu 82 286 -24 498 229 296 0 chr5 122564601 122564780 -77065370 - MIR SINE MIR -15 247 16 1257 262 110 24 chr5 122564851 122564924 -77065226 - L2 LINE L2 0 3313 3248 1793 147 30 27 chr5 122564924 122565258 -77064892 + MER44D DNA MER2_type 2 606 -3 1257 262 110 24 chr5 122565258 122565720 -77064430 - L2 LINE L2 -65 3248 2726 1160 314 56 24 chr5 122567172 122567765 -77062385 - HAL1 LINE L1 -630 1877 1266 2572 138 145 22 chr5 122567949 122568038 -77062112 + L1MC1 LINE L1 5731 5808 -525 2157 128 0 0 chr5 122568038 122568344 -77061806 + AluSq SINE Alu 1 306 -7 2572 138 145 22 chr5 122568344 122568791 -77061359 + L1MC1 LINE L1 5808 6333 0 788 244 82 49 chr5 122568792 122569148 -77061002 - L2 LINE L2 -197 3116 2751 664 206 8 8 chr5 122569345 122569471 -77060679 + FLAM_A SINE Alu 1 126 -7 280 287 35 9 chr5 122572050 122572165 -77057985 + GA-rich Low_complexity Low_complexity 3 120 0 265 322 130 0 chr5 122572807 122572922 -77057228 - MIR3 SINE MIR -46 162 33 2265 63 0 17 chr5 122573400 122573733 -77056417 - AluY SINE Alu 0 328 1 219 265 0 81 chr5 122574113 122574198 -77055952 + MIR SINE MIR 34 108 -100 * 408 326 67 38 chr5 122574196 122574435 -77055715 - MIR SINE MIR -5 257 12 213 108 0 0 chr5 122576463 122576500 -77053650 + (A)n Simple_repeat Simple_repeat 1 37 0 9189 152 22 11 chr5 122576510 122579791 -77050359 + L1PA13 LINE L1 2851 6159 -4 306 0 0 0 chr5 122583086 122583120 -77047030 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 28605 30 0 0 chr5 122583120 122587353 -77042797 - L1PA3 LINE L1 -13 6858 2562 3183 140 131 3 chr5 122588392 122588965 -77041185 - Tigger4(Zombi) DNA MER2_type 0 2731 2086 984 176 0 0 chr5 122588962 122589121 -77041029 - Tigger4(Zombi) DNA MER2_type -2571 160 2 * 23 86 0 0 chr5 122590146 122590204 -77039946 + AT_rich Low_complexity Low_complexity 1 58 0 262 271 107 89 chr5 122590339 122590877 -77039273 - L1PA3 LINE L1 -856 2367 1809 1489 139 18 0 chr5 122590877 122591100 -77039050 - AluSg/x SINE Alu -8 302 76 262 271 107 89 chr5 122591100 122591366 -77038784 - L1PA3 LINE L1 -1414 1809 1549 801 245 51 31 chr5 122593719 122593976 -77036174 - MIR SINE MIR 0 262 1 5588 60 17 17 chr5 122595039 122595805 -77034345 + MER4E LTR ERV1 1 766 0 206 303 0 30 chr5 122597395 122597461 -77032689 - L2 LINE L2 -4 3268 3205 620 292 28 0 chr5 122597507 122597685 -77032465 - MIR SINE MIR -77 185 3 269 291 89 65 chr5 122597692 122597984 -77032166 - L2 LINE L2 -86 3227 2929 22 35 0 0 chr5 122598079 122598108 -77032042 + AT_rich Low_complexity Low_complexity 1 29 0 13648 46 5 1 chr5 122598461 122600915 -77029235 + L1PA5 LINE L1 3690 6146 -8 22 56 0 0 chr5 122601384 122601420 -77028730 + AT_rich Low_complexity Low_complexity 1 36 0 1778 161 3 7 chr5 122602472 122602758 -77027392 + AluSx SINE Alu 4 288 -24 26 30 0 0 chr5 122602758 122602791 -77027359 + AT_rich Low_complexity Low_complexity 1 33 0 250 181 48 0 chr5 122603103 122603186 -77026964 + (TA)n Simple_repeat Simple_repeat 2 88 0 7582 127 41 10 chr5 122603842 122605104 -77025046 - HSMAR2 DNA Mariner 0 1302 2 774 242 113 5 chr5 122606110 122606296 -77023854 - MER58A DNA MER1_type -1 223 18 746 326 120 40 chr5 122606391 122607131 -77023019 + L2 LINE L2 1851 2649 -665 379 332 66 66 chr5 122607113 122607417 -77022733 + L2 LINE L2 2926 3229 -43 * 224 317 12 12 chr5 122607923 122608005 -77022145 - L2 LINE L2 -214 3058 2977 24 32 0 0 chr5 122608005 122608036 -77022114 + AT_rich Low_complexity Low_complexity 1 31 0 1871 139 59 0 chr5 122608063 122608350 -77021800 - AluSq SINE Alu -9 304 1 1530 170 22 75 chr5 122608507 122608878 -77021272 + L1MB8 LINE L1 5828 6178 0 329 245 49 29 chr5 122611894 122611996 -77018154 + MIR3 SINE MIR 99 202 -6 1073 323 102 35 chr5 122613752 122614322 -77015828 + L2 LINE L2 2166 2773 -541 1748 175 66 6 chr5 122614362 122614727 -77015423 - MLT1B LTR MaLR -3 387 1 2162 99 0 0 chr5 122615166 122615448 -77014702 - AluSx SINE Alu -17 295 14 1752 169 10 16 chr5 122615662 122615969 -77014181 + AluJo SINE Alu 1 305 -7 258 156 0 0 chr5 122616137 122616182 -77013968 + (TG)n Simple_repeat Simple_repeat 2 46 0 969 267 81 8 chr5 122616951 122617209 -77012941 - MER115 DNA AcHobo 0 693 417 6226 231 63 30 chr5 122617393 122618850 -77011300 - L1 LINE L1 -2219 4163 2755 852 234 45 0 chr5 122618850 122619051 -77011099 + MER6B DNA MER2_type 1 210 0 6226 231 63 30 chr5 122619051 122620687 -77009463 - L1 LINE L1 -3627 2755 1059 2302 107 7 0 chr5 122620687 122620996 -77009154 - AluSx SINE Alu -1 311 1 6226 231 63 30 chr5 122620996 122621260 -77008890 - L1 LINE L1 -5323 1059 805 234 229 14 29 chr5 122621393 122621463 -77008687 - L1 LINE L1 -5308 995 927 278 270 52 78 chr5 122621500 122621730 -77008420 - L1 LINE L1 -5899 414 191 395 174 23 12 chr5 122623878 122623964 -77006186 + LTR32 LTR ERVL 307 393 -78 367 282 68 55 chr5 122626351 122626862 -77003288 - L1ME4a LINE L1 -1 6120 5603 1654 184 11 11 chr5 122626908 122627191 -77002959 + AluJb SINE Alu 1 283 -29 1473 160 6 94 chr5 122627284 122627603 -77002547 + AluJo SINE Alu 5 295 -17 419 248 6 12 chr5 122627667 122627779 -77002371 - L1ME4a LINE L1 -517 5604 5498 745 316 52 58 chr5 122627974 122628436 -77001714 - L2 LINE L2 0 3272 2814 362 319 216 9 chr5 122628433 122628665 -77001485 + L2 LINE L2 2495 2774 -540 * 377 261 108 62 chr5 122628703 122628879 -77001271 + MIR SINE MIR 58 241 -21 22 0 0 0 chr5 122629065 122629087 -77001063 + AT_rich Low_complexity Low_complexity 1 22 0 317 114 0 0 chr5 122629270 122629314 -77000836 + MER58A DNA MER1_type 37 80 -27 1290 210 47 121 chr5 122629316 122629763 -77000387 + MLT1E LTR MaLR 180 593 0 694 152 87 14 chr5 122629763 122629901 -77000249 + MER58A DNA MER1_type 77 224 0 284 251 92 12 chr5 122630033 122630245 -76999905 + MLT1J LTR MaLR 102 367 -144 234 62 0 0 chr5 122632450 122632482 -76997668 + (CA)n Simple_repeat Simple_repeat 2 33 0 22 35 0 0 chr5 122633369 122633398 -76996752 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr5 122635050 122635077 -76995073 + (T)n Simple_repeat Simple_repeat 1 27 0 25 0 0 0 chr5 122635114 122635139 -76995011 + AT_rich Low_complexity Low_complexity 1 25 0 210 191 0 0 chr5 122635613 122635660 -76994490 + (TG)n Simple_repeat Simple_repeat 1 47 0 319 320 101 24 chr5 122636283 122636459 -76993691 - MIR SINE MIR -56 206 21 495 220 64 29 chr5 122636470 122636643 -76993507 + LTR41 LTR ERVL 1 179 -594 336 227 144 98 chr5 122637037 122637207 -76992943 + LTR41 LTR ERVL 510 717 -78 2110 131 3 0 chr5 122637207 122637497 -76992653 - AluSx SINE Alu -21 291 1 336 227 144 98 chr5 122637497 122637580 -76992570 + LTR41 LTR ERVL 717 795 0 297 359 0 10 chr5 122638050 122638153 -76991997 - MIR SINE MIR -84 124 23 306 98 82 0 chr5 122639430 122639491 -76990659 - LTR54 LTR ERV1 -49 461 396 2712 223 94 18 chr5 122639760 122640818 -76989332 - L1ME2 LINE L1 -11 6153 5003 7179 219 72 61 chr5 122640845 122641140 -76989010 - L1MB3 LINE L1 -3 6362 6072 1724 197 0 7 chr5 122641140 122641434 -76988716 - AluJb SINE Alu -20 292 1 7179 219 72 61 chr5 122641434 122643713 -76986437 - L1MB3 LINE L1 -293 6072 3819 2074 131 3 16 chr5 122643713 122644027 -76986123 - AluSx SINE Alu -2 310 1 7179 219 72 61 chr5 122644027 122644327 -76985823 - L1MB3 LINE L1 -2546 3819 3524 1683 189 0 7 chr5 122644327 122644602 -76985548 - AluJb SINE Alu -39 273 1 7179 219 72 61 chr5 122644602 122645443 -76984707 - L1MB3 LINE L1 -2841 3524 2380 324 312 91 7 chr5 122645518 122645672 -76984478 - HERVL LTR ERVL -2174 3480 3314 279 237 70 44 chr5 122646116 122646230 -76983920 - HERVL LTR ERVL -2622 3032 2916 2932 173 17 62 chr5 122646307 122646948 -76983202 - LTR9 LTR ERV1 0 612 1 928 153 76 22 chr5 122648588 122648811 -76981339 - MER96B DNA MER1_type? -3 414 180 4074 196 55 6 chr5 122648867 122649718 -76980432 - L1MB3 LINE L1 -4434 894 2 792 229 67 19 chr5 122649712 122649979 -76980171 - L1ME2 LINE L1 -1137 5009 4730 * 958 144 19 102 chr5 122649998 122650310 -76979840 + L1M1 LINE L1 2279 2500 -4065 419 262 41 41 chr5 122650320 122650492 -76979658 + ERVL LTR ERVL 3686 3857 -1907 290 272 0 49 chr5 122650752 122650833 -76979317 - L2 LINE L2 -8 3305 3229 632 289 28 55 chr5 122651363 122651726 -76978424 - L1ME LINE L1 -5711 359 7 416 285 79 54 chr5 122651732 122652048 -76978102 - L1ME LINE L1 -5185 885 562 198 292 15 0 chr5 122652841 122652906 -76977244 + L2 LINE L2 2898 2963 -309 235 317 85 0 chr5 122653099 122653181 -76976969 - L2 LINE L2 -32 3240 3152 1007 187 57 40 chr5 122654532 122654881 -76975269 - MSTD LTR MaLR -1 395 6 245 148 0 0 chr5 122655124 122655178 -76974972 + L1MEc LINE L1 956 1009 -5387 392 232 30 49 chr5 122655233 122655397 -76974753 + L1MEc LINE L1 703 863 -5744 998 142 0 0 chr5 122655436 122655577 -76974573 + AluJ SINE Alu 1 141 -171 264 255 62 14 chr5 122655614 122655759 -76974391 + L1MEc LINE L1 877 1028 -5579 26 98 0 0 chr5 122655772 122655854 -76974296 + AT_rich Low_complexity Low_complexity 1 82 0 1205 273 52 21 chr5 122655862 122656405 -76973745 + L1MEc LINE L1 1042 1608 -4999 1062 236 79 45 chr5 122656405 122656529 -76973621 + AluJb SINE Alu 1 119 -183 1496 161 13 74 chr5 122656529 122656840 -76973310 - AluSx SINE Alu -20 292 1 1062 236 79 45 chr5 122656840 122657007 -76973143 + AluJb SINE Alu 119 302 0 1205 273 52 21 chr5 122657007 122657074 -76973076 + L1MEc LINE L1 1608 1671 -4936 1227 183 148 0 chr5 122657078 122657341 -76972809 + L1MCa LINE L1 19 320 -6106 4219 169 110 16 chr5 122657351 122658322 -76971828 + L1MCa LINE L1 552 1758 -4668 1548 191 28 19 chr5 122658322 122658684 -76971466 - MLT1A1 LTR MaLR 0 365 1 4219 169 110 16 chr5 122658684 122658867 -76971283 + L1MCa LINE L1 1758 1922 -4504 296 249 103 66 chr5 122658862 122659075 -76971075 + L1MEc LINE L1 1665 1885 -4722 * 785 191 0 0 chr5 122659055 122659196 -76970954 + L1MEc LINE L1 180 320 -6106 242 108 0 0 chr5 122659205 122659242 -76970908 + L1MEc LINE L1 550 586 -5840 344 22 0 22 chr5 122659341 122659387 -76970763 + (CA)n Simple_repeat Simple_repeat 1 45 0 393 75 0 0 chr5 122659387 122659440 -76970710 + (TC)n Simple_repeat Simple_repeat 2 54 0 1082 254 82 20 chr5 122659442 122659943 -76970207 + L1MEc LINE L1 1980 2511 -4096 830 212 7 0 chr5 122659944 122660090 -76970060 + AluJ SINE Alu 136 282 -30 928 239 59 42 chr5 122660124 122660253 -76969897 + L1MEc LINE L1 2484 2609 -3817 2601 116 0 3 chr5 122660253 122660616 -76969534 - THE1B LTR MaLR 0 364 3 9621 121 45 41 chr5 122660616 122662189 -76967961 - THE1B-int LTR MaLR 0 1580 1 2538 122 0 14 chr5 122662189 122662558 -76967592 - THE1B LTR MaLR 0 364 1 928 239 59 42 chr5 122662558 122662852 -76967298 + L1MEc LINE L1 2608 2916 -3510 23 0 0 0 chr5 122662923 122662946 -76967204 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr5 122662963 122662989 -76967161 + AT_rich Low_complexity Low_complexity 1 26 0 6332 31 0 1 chr5 122663240 122664039 -76966111 - L1P LINE L1 -914 5232 4435 6090 34 7 0 chr5 122664038 122664822 -76965328 + L1PA4 LINE L1 5369 6157 0 * 706 200 0 72 chr5 122664955 122665026 -76965124 - MER63A DNA MER1_type -1518 170 95 2394 114 0 0 chr5 122665026 122665333 -76964817 + AluSg SINE Alu 1 307 -3 706 200 0 72 chr5 122665333 122665441 -76964709 - MER63A DNA MER1_type -1593 95 4 268 304 188 25 chr5 122665452 122665728 -76964422 + L1MC/D LINE L1 5506 5826 -1982 914 324 52 42 chr5 122665734 122666355 -76963795 + L1MA6 LINE L1 68 694 -6155 4005 249 26 16 chr5 122666809 122668083 -76962067 + L1MA6 LINE L1 1386 2671 -4178 3428 18 0 8 chr5 122668401 122668800 -76961350 - L1PA3 LINE L1 0 6155 5760 659 269 6 18 chr5 122668862 122669029 -76961121 + FAM SINE Alu 1 165 -10 13162 175 37 34 chr5 122669049 122672099 -76958051 + L1MA6 LINE L1 2915 5975 -1027 180 0 0 0 chr5 122672099 122672119 -76958031 + (CAA)n Simple_repeat Simple_repeat 2 21 0 13162 175 37 34 chr5 122672119 122673150 -76957000 + L1MA6 LINE L1 5975 7001 -1 742 311 104 2 chr5 122673482 122673884 -76956266 + L1ME4a LINE L1 5505 5947 -174 231 167 0 0 chr5 122673897 122673933 -76956217 + MER34C LTR ERV1 1 36 -549 * 1120 197 119 60 chr5 122673904 122674351 -76955799 + MER39 LTR ERV1 8 662 -45 306 242 26 85 chr5 122674808 122674961 -76955189 - MER103 DNA DNA 0 166 23 1766 127 63 27 chr5 122675646 122675977 -76954173 - MER61A LTR ERV1 0 343 1 19504 108 43 14 chr5 122675977 122679675 -76950475 - MER61A-int LTR ERV1 0 6066 1320 3198 166 106 20 chr5 122679668 122680385 -76949765 - MER61A-int LTR ERV1 -4440 777 2 * 1621 117 163 20 chr5 122680386 122680686 -76949464 - MER61A LTR ERV1 0 343 1 283 160 27 13 chr5 122680690 122680765 -76949385 + GA-rich Low_complexity Low_complexity 2 77 0 387 305 92 35 chr5 122681285 122681655 -76948495 + L1ME4a LINE L1 5410 5800 -321 516 262 90 94 chr5 122681658 122681914 -76948236 + MIR SINE MIR 4 258 -4 10457 140 43 23 chr5 122681922 122683683 -76946467 - Tigger2 DNA MER2_type -10 2708 912 811 126 9 0 chr5 122683709 122683820 -76946330 - FRAM SINE Alu -52 124 13 728 157 9 0 chr5 122683820 122683935 -76946215 - Tigger2 DNA MER2_type -1804 914 799 3321 144 19 9 chr5 122683937 122684477 -76945673 - Tigger2 DNA MER2_type -2173 545 1 326 174 96 26 chr5 122684635 122684750 -76945400 + L1ME4a LINE L1 5988 6110 -11 6771 147 50 8 chr5 122684863 122685971 -76944179 + ERVL-B1 LTR ERVL 4604 5757 -7 1817 185 91 11 chr5 122685972 122686334 -76943816 + MLT2B1 LTR ERVL 2 392 -128 531 82 0 0 chr5 122686334 122686407 -76943743 + (CA)n Simple_repeat Simple_repeat 1 73 0 728 271 72 50 chr5 122686505 122687395 -76942755 + L1MEd LINE L1 869 1770 -4445 248 298 96 90 chr5 122687817 122688005 -76942145 + MLT1K LTR MaLR 212 400 -188 545 98 24 0 chr5 122688411 122688493 -76941657 - L1PA15 LINE L1 -13 6152 6069 1394 204 116 36 chr5 122689393 122689796 -76940354 - MLT1C LTR MaLR 0 467 21 748 245 50 20 chr5 122691021 122691228 -76938922 - MIR SINE MIR -12 250 40 347 264 176 14 chr5 122692622 122692770 -76937380 + MIR SINE MIR 20 191 -71 560 211 19 81 chr5 122692820 122692981 -76937169 - MIR SINE MIR -88 174 24 247 217 239 43 chr5 122694033 122694217 -76935933 + MIR SINE MIR 35 254 -8 337 376 24 24 chr5 122694348 122694646 -76935504 + ERVL LTR ERVL 5065 5362 -402 1408 335 123 24 chr5 122695286 122696308 -76933842 - L2 LINE L2 -1968 1346 223 312 70 0 0 chr5 122696378 122696421 -76933729 + (ATG)n Simple_repeat Simple_repeat 2 44 0 258 262 0 33 chr5 122696509 122696570 -76933580 + MIR SINE MIR 59 117 -145 182 293 69 60 chr5 122696657 122696773 -76933377 - MER5A DNA MER1_type -30 159 43 285 296 25 12 chr5 122697234 122697315 -76932835 + L2 LINE L2 3186 3267 -5 306 283 59 20 chr5 122697410 122697562 -76932588 + HAL1 LINE L1 1586 1743 -764 2298 100 7 0 chr5 122697988 122698287 -76931863 + AluSp SINE Alu 1 301 -12 300 289 0 0 chr5 122698288 122698371 -76931779 + L1MEd LINE L1 2192 2274 -4122 277 145 23 41 chr5 122698516 122698603 -76931547 - L1ME LINE L1 -720 5450 5369 27 0 0 0 chr5 122698639 122698666 -76931484 + AT_rich Low_complexity Low_complexity 1 27 0 1923 147 14 0 chr5 122698682 122698967 -76931183 - AluSx SINE Alu -23 289 1 393 226 38 23 chr5 122698969 122699102 -76931048 - L1ME LINE L1 -774 5390 5256 362 276 31 56 chr5 122699109 122699431 -76930719 + L1MEd LINE L1 2927 3240 -2975 1271 280 121 19 chr5 122699723 122700549 -76929601 + L1MEd LINE L1 3662 4571 -1644 578 260 221 5 chr5 122704085 122704289 -76925861 - MIR SINE MIR -3 259 12 298 372 41 0 chr5 122704810 122704931 -76925219 - MIR SINE MIR -79 183 58 395 294 88 12 chr5 122705435 122705595 -76924555 - MIR SINE MIR -1 261 90 2975 103 15 2 chr5 122705661 122706069 -76924081 + MLT2A2 LTR ERVL 1 413 -40 423 186 0 21 chr5 122706085 122706225 -76923925 + (TA)n Simple_repeat Simple_repeat 2 138 0 362 111 0 0 chr5 122706230 122706284 -76923866 + MLT2A2 LTR ERVL 400 453 0 325 245 88 10 chr5 122706926 122707028 -76923122 - MIR SINE MIR -64 144 35 534 272 122 14 chr5 122711271 122711484 -76918666 + MIR SINE MIR 24 259 -3 258 270 56 158 chr5 122711716 122712001 -76918149 + L2 LINE L2 3007 3262 -10 1093 258 61 81 chr5 122712216 122712741 -76917409 + MLT2F LTR ERVL 86 599 -64 2231 115 0 3 chr5 122712741 122713046 -76917104 - AluSg SINE Alu -6 304 1 1093 258 61 81 chr5 122713046 122713110 -76917040 + MLT2F LTR ERVL 599 663 0 225 345 85 6 chr5 122715425 122715590 -76914560 + L2 LINE L2 2882 3059 -213 2247 119 41 54 chr5 122715703 122716072 -76914078 + THE1B LTR MaLR 1 364 0 533 272 228 0 chr5 122716083 122716285 -76913865 + MIR SINE MIR 8 255 -7 2220 155 72 97 chr5 122716582 122716986 -76913164 - MER70A LTR ERVL 0 472 80 2368 105 0 3 chr5 122716986 122717300 -76912850 - AluSp SINE Alu 0 313 1 2220 155 72 97 chr5 122717300 122717379 -76912771 - MER70A LTR ERVL -392 80 1 1228 250 153 24 chr5 122719542 122719898 -76910252 + L1MC4a LINE L1 5539 5967 -1841 787 162 88 70 chr5 122719898 122720126 -76910024 - MER106A DNA MER1_type 0 236 5 1228 250 153 24 chr5 122720126 122720221 -76909929 + L1MC4a LINE L1 5967 6048 -1760 195 42 0 0 chr5 122720988 122721012 -76909138 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 268 198 0 104 chr5 122721235 122721286 -76908864 + MIR SINE MIR 118 156 -106 2022 142 48 12 chr5 122721286 122721618 -76908532 - MER2 DNA MER2_type 0 344 1 268 198 0 104 chr5 122721618 122721662 -76908488 + MIR SINE MIR 156 203 -59 1783 146 18 0 chr5 122722442 122722704 -76907446 + MER7A DNA MER2_type 1 265 -81 357 151 0 55 chr5 122722704 122722777 -76907373 + Tigger2 DNA MER2_type 2 70 -2648 2529 128 34 27 chr5 122722777 122723190 -76906960 + Tigger2 DNA MER2_type 2303 2718 0 480 186 23 0 chr5 122723190 122723275 -76906875 + MER7A DNA MER2_type 260 346 0 251 259 9 0 chr5 122723283 122723395 -76906755 + (TA)n Simple_repeat Simple_repeat 1 113 0 26 0 0 0 chr5 122723541 122723567 -76906583 + AT_rich Low_complexity Low_complexity 1 26 0 495 243 186 33 chr5 122723588 122723798 -76906352 - L1ME LINE L1 -420 5701 5460 237 164 55 55 chr5 122723950 122724005 -76906145 - MLT1A1 LTR MaLR 0 374 320 31 58 0 0 chr5 122724041 122724093 -76906057 + AT_rich Low_complexity Low_complexity 1 52 0 633 49 0 0 chr5 122724093 122724174 -76905976 + (CA)n Simple_repeat Simple_repeat 2 82 0 1604 133 63 7 chr5 122724174 122724444 -76905706 - MLT1A1 LTR MaLR -80 285 1 197 337 11 53 chr5 122724719 122724814 -76905336 + L2 LINE L2 3000 3090 -182 22 0 0 0 chr5 122724856 122724878 -76905272 + AT_rich Low_complexity Low_complexity 1 22 0 1298 159 22 4 chr5 122724940 122725167 -76904983 - L1MA8 LINE L1 0 6291 6061 355 277 10 0 chr5 122726686 122726787 -76903363 + Charlie8 DNA MER1_type 96 197 -2220 180 0 0 0 chr5 122727363 122727383 -76902767 + (T)n Simple_repeat Simple_repeat 1 20 0 299 338 46 20 chr5 122729329 122729480 -76900670 + MIR SINE MIR 46 200 -62 34 42 0 0 chr5 122730593 122730641 -76899509 + AT_rich Low_complexity Low_complexity 1 48 0 373 188 25 25 chr5 122731225 122731305 -76898845 + MER116 DNA Mariner 1 80 0 21 0 0 0 chr5 122732762 122732783 -76897367 + AT_rich Low_complexity Low_complexity 1 21 0 249 230 27 14 chr5 122733048 122733122 -76897028 + MER5A DNA MER1_type 1 75 -114 * 452 180 9 12 chr5 122733114 122733223 -76896927 - MER5A DNA MER1_type -79 110 4 375 193 0 0 chr5 122734514 122734602 -76895548 + (TGGA)n Simple_repeat Simple_repeat 1 88 0 381 80 0 0 chr5 122735353 122735403 -76894747 - L1PA8 LINE L1 -9 6163 6114 198 345 0 0 chr5 122735896 122735951 -76894199 + MIR SINE MIR 30 84 -124 616 301 149 19 chr5 122736089 122736398 -76893752 + MLT1K LTR MaLR 193 541 -47 261 180 0 0 chr5 122736411 122736461 -76893689 + CT-rich Low_complexity Low_complexity 4 53 0 180 205 26 0 chr5 122736500 122736539 -76893611 + MIR SINE MIR 85 124 -138 263 264 11 23 chr5 122738336 122738423 -76891727 - MIR SINE MIR -86 122 37 21 0 0 0 chr5 122738934 122738955 -76891195 + AT_rich Low_complexity Low_complexity 1 21 0 447 328 65 15 chr5 122739520 122739721 -76890429 + MIR SINE MIR 20 230 -32 490 157 227 0 chr5 122740059 122740200 -76889950 + MER33 DNA MER1_type 1 174 -97 2291 120 7 89 chr5 122740922 122740966 -76889184 + MLT1B LTR MaLR 1 47 -343 2466 77 3 0 chr5 122740966 122741264 -76888886 + AluSx SINE Alu 1 299 -13 2291 120 7 89 chr5 122741264 122741644 -76888506 + MLT1B LTR MaLR 47 390 0 253 177 42 62 chr5 122742794 122742890 -76887260 + L1ME4a LINE L1 5997 6090 -31 239 356 56 28 chr5 122743428 122743644 -76886506 - MIR SINE MIR -19 243 22 24 0 0 0 chr5 122744424 122744448 -76885702 + AT_rich Low_complexity Low_complexity 1 24 0 1768 188 3 0 chr5 122744459 122744757 -76885393 - AluJo SINE Alu -13 299 1 206 179 18 0 chr5 122745541 122745597 -76884553 + GA-rich Low_complexity Low_complexity 1 57 0 410 280 111 26 chr5 122745830 122746019 -76884131 - MLT1K LTR MaLR -2 586 382 1657 183 3 20 chr5 122746022 122746317 -76883833 - AluJb SINE Alu -22 290 1 683 264 84 16 chr5 122747416 122747889 -76882261 - MLT1G1 LTR MaLR 0 595 3 181 352 67 0 chr5 122748219 122748324 -76881826 + MIR SINE MIR 39 150 -58 1290 161 9 5 chr5 122748699 122748917 -76881233 + MER20 DNA MER1_type 1 219 0 622 263 107 5 chr5 122749579 122749803 -76880347 + MER112 DNA MER1_type 2 248 -12 185 338 0 0 chr5 122749988 122750059 -76880091 - L2 LINE L2 -2676 638 568 321 311 42 17 chr5 122751036 122751155 -76878995 + MLT1H LTR MaLR 29 150 -399 246 245 0 0 chr5 122751151 122751204 -76878946 + MLT1I LTR MaLR 91 143 -266 * 225 235 147 20 chr5 122751382 122751484 -76878666 + MLT1H LTR MaLR 433 547 -2 335 338 7 65 chr5 122752213 122752367 -76877783 + MER91A DNA MER1_type 52 196 0 506 214 21 118 chr5 122752907 122753094 -76877056 - MER69A DNA AcHobo -7 170 2 2778 107 33 17 chr5 122753448 122753869 -76876281 - MSTA LTR MaLR 0 428 1 183 45 91 23 chr5 122754030 122754074 -76876076 + T-rich Low_complexity Low_complexity 5 51 0 1957 118 7 17 chr5 122756309 122756624 -76873526 + AluSc SINE Alu 1 312 0 322 277 102 29 chr5 122756813 122756950 -76873200 + L2 LINE L2 3121 3267 -5 1945 245 90 42 chr5 122758011 122758058 -76872092 - MLT2F LTR ERVL -8 655 612 1250 169 19 0 chr5 122758058 122758271 -76871879 + MER20 DNA MER1_type 3 219 0 1945 245 90 42 chr5 122758271 122758848 -76871302 - MLT2F LTR ERVL -51 612 1 419 347 55 0 chr5 122759024 122759332 -76870818 + L1MC/D LINE L1 5373 5697 -2111 249 33 0 0 chr5 122760075 122760105 -76870045 + (TG)n Simple_repeat Simple_repeat 1 30 0 282 291 17 23 chr5 122760709 122760827 -76869323 - MIR SINE MIR -58 150 35 1264 187 4 9 chr5 122761282 122761579 -76868571 + MER2 DNA MER2_type 2 340 -5 511 345 25 21 chr5 122764909 122765144 -76865006 + MIR SINE MIR 10 245 -17 433 274 74 39 chr5 122765249 122765479 -76864671 - L2 LINE L2 -5 3267 3030 446 228 0 8 chr5 122765524 122765647 -76864503 + (TA)n Simple_repeat Simple_repeat 1 122 0 22 35 0 0 chr5 122765656 122765685 -76864465 + AT_rich Low_complexity Low_complexity 1 29 0 5016 154 18 40 chr5 122765685 122766802 -76863348 - L1MA9 LINE L1 -6 6285 5115 1941 165 0 13 chr5 122766802 122767118 -76863032 - AluSx SINE Alu 0 312 1 5016 154 18 40 chr5 122767118 122767234 -76862916 - L1MA9 LINE L1 -1176 5115 4998 499 295 74 30 chr5 122767259 122767592 -76862558 + MLT1J LTR MaLR 62 451 -60 285 325 81 0 chr5 122767664 122767787 -76862363 + MIR3 SINE MIR 28 160 -48 2169 187 49 6 chr5 122768273 122768739 -76861411 + MER66B LTR ERV1 1 486 0 371 263 35 70 chr5 122769098 122769297 -76860853 - MIR SINE MIR -65 143 3 194 0 39 0 chr5 122769908 122769934 -76860216 + (CA)n Simple_repeat Simple_repeat 1 27 0 225 218 59 119 chr5 122773547 122773611 -76856539 + MIR3 SINE MIR 65 122 -86 1931 98 8 0 chr5 122773611 122773875 -76856275 - AluSc SINE Alu -7 302 37 225 218 59 119 chr5 122773875 122773911 -76856239 + MIR3 SINE MIR 122 159 -49 180 0 0 0 chr5 122774699 122774719 -76855431 + (A)n Simple_repeat Simple_repeat 1 20 0 227 173 19 0 chr5 122775454 122775506 -76854644 + T-rich Low_complexity Low_complexity 4 56 0 26 30 0 0 chr5 122776505 122776538 -76853612 + AT_rich Low_complexity Low_complexity 1 33 0 281 89 22 0 chr5 122778089 122778134 -76852016 + (TG)n Simple_repeat Simple_repeat 1 46 0 2149 101 0 23 chr5 122779899 122780205 -76849945 + AluSg1 SINE Alu 1 299 -10 216 0 0 0 chr5 122780596 122780620 -76849530 + (A)n Simple_repeat Simple_repeat 1 24 0 586 211 43 62 chr5 122782855 122783063 -76847087 + MIR SINE MIR 12 215 -47 214 281 0 35 chr5 122784701 122784758 -76845392 - L2 LINE L2 -37 3235 3181 478 342 99 31 chr5 122785039 122785261 -76844889 + L2 LINE L2 2921 3157 -115 396 103 0 0 chr5 122786623 122786681 -76843469 + (TG)n Simple_repeat Simple_repeat 2 59 0 401 327 127 27 chr5 122787611 122787831 -76842319 + MIR SINE MIR 12 253 -9 408 276 119 0 chr5 122788040 122788174 -76841976 + MER5A DNA MER1_type 33 182 -7 23 33 0 0 chr5 122789330 122789360 -76840790 + AT_rich Low_complexity Low_complexity 1 30 0 184 369 46 31 chr5 122791636 122791766 -76838384 + L2 LINE L2 3181 3312 -1 209 83 28 0 chr5 122791880 122791916 -76838234 + (TAAAAA)n Simple_repeat Simple_repeat 6 42 0 307 112 141 176 chr5 122792356 122792526 -76837624 - MER53 DNA DNA -25 164 1 1102 111 0 0 chr5 122792619 122792763 -76837387 - AluSg/x SINE Alu -13 299 156 1081 219 39 86 chr5 122794638 122795176 -76834974 + MER113 DNA MER1_type? 9 521 0 189 0 0 0 chr5 122797887 122797908 -76832242 + (A)n Simple_repeat Simple_repeat 1 21 0 2208 98 0 23 chr5 122797913 122798219 -76831931 + AluSx SINE Alu 1 299 -13 297 0 0 0 chr5 122799706 122799739 -76830411 + (TGG)n Simple_repeat Simple_repeat 3 35 0 309 246 184 25 chr5 122799741 122799958 -76830192 + MIR SINE MIR 7 255 -7 379 261 11 0 chr5 122802716 122802804 -76827346 + L2 LINE L2 3221 3309 -4 198 316 25 13 chr5 122803437 122803516 -76826634 - MIR3 SINE MIR -1 207 128 232 239 0 0 chr5 122803700 122803746 -76826404 + CT-rich Low_complexity Low_complexity 4 49 0 22 0 0 0 chr5 122804673 122804695 -76825455 + AT_rich Low_complexity Low_complexity 1 22 0 297 75 0 0 chr5 122806093 122806133 -76824017 + (CA)n Simple_repeat Simple_repeat 1 40 0 258 250 0 0 chr5 122808176 122808232 -76821918 + MARNA DNA Mariner 158 213 -373 319 239 103 32 chr5 122808300 122808455 -76821695 + MARNA DNA Mariner 327 492 -94 298 318 0 0 chr5 122810112 122810197 -76819953 + (CATATA)n Simple_repeat Simple_repeat 5 89 0 252 0 0 0 chr5 122810753 122810781 -76819369 + (TG)n Simple_repeat Simple_repeat 2 29 0 194 103 0 26 chr5 122812604 122812643 -76817507 + (TTTTTG)n Simple_repeat Simple_repeat 4 41 0 226 262 16 0 chr5 122813940 122814001 -76816149 + MIR SINE MIR 78 139 -69 2268 118 0 0 chr5 122815599 122815904 -76814246 + AluSx SINE Alu 1 305 -7 183 164 14 41 chr5 122816139 122816212 -76813938 + CT-rich Low_complexity Low_complexity 1 71 0 212 260 205 24 chr5 122816217 122816344 -76813806 - L2 LINE L2 -1 3312 3163 671 114 19 0 chr5 122816348 122816488 -76813662 + AluSg/x SINE Alu 189 330 0 215 61 30 0 chr5 122817091 122817124 -76813026 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 282 325 107 6 chr5 122818164 122818333 -76811817 + MIR SINE MIR 47 232 -30 207 162 0 0 chr5 122818913 122818950 -76811200 + A-rich Low_complexity Low_complexity 1 37 0 2152 118 3 3 chr5 122819399 122819695 -76810455 + AluSx SINE Alu 1 296 -16 323 161 0 0 chr5 122822163 122822219 -76807931 - Alu SINE Alu -246 56 1 26 0 0 0 chr5 122823229 122823255 -76806895 + AT_rich Low_complexity Low_complexity 1 26 0 666 183 21 65 chr5 122825245 122825431 -76804719 - MER96B DNA MER1_type? -239 178 1 400 254 41 132 chr5 122825597 122825939 -76804211 + L2 LINE L2 2217 2527 -787 394 319 43 7 chr5 122826034 122826172 -76803978 + L2 LINE L2 2897 3039 -233 293 268 165 31 chr5 122826164 122826261 -76803889 - L2 LINE L2 -2 3270 3161 * 635 295 92 10 chr5 122832076 122832283 -76797867 + MIR SINE MIR 2 225 -37 2111 111 0 20 chr5 122832540 122832837 -76797313 + AluSq SINE Alu 1 291 -22 202 331 114 33 chr5 122832979 122833163 -76796987 - MIR3 SINE MIR -7 201 3 1981 136 3 7 chr5 122833423 122833718 -76796432 + AluSq SINE Alu 1 294 -19 1948 114 13 30 chr5 122835332 122835631 -76794519 - AluSc SINE Alu -15 294 1 338 232 21 11 chr5 122837117 122837212 -76792938 + Charlie8 DNA MER1_type 73 168 -2249 348 94 0 0 chr5 122837247 122837300 -76792850 + (CA)n Simple_repeat Simple_repeat 2 54 0 180 0 0 0 chr5 122838495 122838515 -76791635 + (AGGGGG)n Simple_repeat Simple_repeat 4 23 0 25 0 0 0 chr5 122840048 122840073 -76790077 + AT_rich Low_complexity Low_complexity 1 25 0 423 232 91 83 chr5 122840437 122840678 -76789472 + MER102a DNA MER1_type 75 317 -13 416 257 10 20 chr5 122841263 122841364 -76788786 + MIR3 SINE MIR 87 186 -22 368 170 91 19 chr5 122842218 122842350 -76787800 + MIR SINE MIR 15 160 -73 222 189 0 0 chr5 122842503 122842540 -76787610 + polypyrimidine Low_complexity Low_complexity 1 37 0 327 288 131 25 chr5 122842719 122842879 -76787271 - MIR SINE MIR -14 248 72 2059 152 30 6 chr5 122842880 122843215 -76786935 + MER2 DNA MER2_type 1 343 -1 870 78 0 9 chr5 122844813 122844928 -76785222 - L1MA3 LINE L1 0 6305 6192 2229 114 3 0 chr5 122844942 122845239 -76784911 - AluSp SINE Alu -14 299 2 6438 87 18 9 chr5 122845422 122846325 -76783825 - L1PA11 LINE L1 0 6174 5265 322 292 49 49 chr5 122846364 122846508 -76783642 - MIR3 SINE MIR -59 149 6 190 225 81 135 chr5 122846586 122846697 -76783453 - L2 LINE L2 -21 3251 3147 692 236 101 29 chr5 122848857 122849065 -76781085 + MER46C DNA MER2_type 2 224 -114 327 49 0 0 chr5 122851478 122851519 -76778631 + (CA)n Simple_repeat Simple_repeat 2 42 0 801 294 183 24 chr5 122851587 122852284 -76777866 + L2 LINE L2 2514 3312 -1 382 303 159 14 chr5 122852409 122852617 -76777533 + L3 LINE CR1 1311 1548 -29 2198 109 7 0 chr5 122855131 122855425 -76774725 - AluJb SINE Alu -16 296 1 799 242 6 6 chr5 122855479 122855657 -76774493 - MER5B DNA MER1_type 0 178 1 486 46 0 0 chr5 122856585 122856650 -76773500 + (CA)n Simple_repeat Simple_repeat 2 66 0 522 183 67 0 chr5 122856975 122857079 -76773071 - L2 LINE L2 -15 3298 3188 293 318 53 0 chr5 122857076 122857208 -76772942 + MIR SINE MIR 49 187 -75 * 181 238 79 32 chr5 122857691 122857754 -76772396 - L2 LINE L2 -1 3312 3247 215 333 44 0 chr5 122858083 122858173 -76771977 + L2 LINE L2 2967 3060 -212 205 393 16 0 chr5 122858344 122858405 -76771745 - L2 LINE L2 -86 3186 3125 2129 138 0 9 chr5 122861067 122861393 -76768757 + L1MA5 LINE L1 5976 6298 -2 1785 169 10 7 chr5 122861552 122861854 -76768296 + L1PA16 LINE L1 5861 6163 -3 756 253 136 18 chr5 122862709 122862930 -76767220 - MIR SINE MIR -14 248 2 219 213 16 82 chr5 122862964 122863025 -76767125 - L2 LINE L2 -9 3263 3207 2904 134 17 63 chr5 122863450 122864009 -76766141 + LTR10A LTR ERV1 12 555 -54 201 176 0 0 chr5 122865082 122865116 -76765034 + T-rich Low_complexity Low_complexity 1 34 0 322 318 119 51 chr5 122866231 122866684 -76763466 + L2 LINE L2 2830 3313 0 205 152 0 0 chr5 122868018 122868051 -76762099 + C-rich Low_complexity Low_complexity 2 34 0 252 0 0 0 chr5 122868710 122868738 -76761412 + (A)n Simple_repeat Simple_repeat 1 28 0 209 271 110 76 chr5 122869074 122869192 -76760958 - MIR3 SINE MIR -5 203 82 181 399 75 8 chr5 122869351 122869484 -76760666 + MIR SINE MIR 50 191 -71 2260 86 3 10 chr5 122869738 122870065 -76760085 + AluSc SINE Alu 1 309 0 23 0 0 0 chr5 122870574 122870597 -76759553 + AT_rich Low_complexity Low_complexity 1 23 0 276 30 0 0 chr5 122871429 122871462 -76758688 + (TG)n Simple_repeat Simple_repeat 2 34 0 27 0 0 0 chr5 122871678 122871705 -76758445 + AT_rich Low_complexity Low_complexity 1 27 0 2244 99 0 0 chr5 122873394 122873704 -76756446 + AluSx SINE Alu 1 310 0 1814 161 0 32 chr5 122876126 122876442 -76753708 - AluJb SINE Alu -6 306 1 2333 152 26 128 chr5 122876655 122877132 -76753018 + LTR10A LTR ERV1 1 402 -207 2318 89 3 0 chr5 122877132 122877424 -76752726 + AluSq SINE Alu 1 293 -20 2333 152 26 128 chr5 122877424 122877564 -76752586 + LTR10A LTR ERV1 402 555 -54 578 270 145 0 chr5 122878314 122878473 -76751677 - MER5A DNA MER1_type 0 189 8 225 0 0 0 chr5 122879578 122879603 -76750547 + (A)n Simple_repeat Simple_repeat 1 25 0 186 340 82 0 chr5 122882650 122882747 -76747403 - MER5B DNA MER1_type 0 178 74 447 19 0 0 chr5 122883158 122883210 -76746940 + (CA)n Simple_repeat Simple_repeat 1 52 0 908 237 60 0 chr5 122883281 122883496 -76746654 - MIR SINE MIR 0 262 35 1378 156 75 35 chr5 122887411 122887693 -76742457 + AluJo SINE Alu 1 293 -19 734 247 174 5 chr5 122888298 122888517 -76741633 - MIR SINE MIR -2 260 5 1496 155 64 0 chr5 122889083 122889334 -76740816 - AluSx SINE Alu -13 299 33 762 259 72 15 chr5 122889334 122889591 -76740559 - HsTC2 DNA Tc2 -105 1793 1522 1062 64 0 21 chr5 122890141 122890281 -76739869 - L1PA8 LINE L1 -2 6170 6034 2203 108 114 11 chr5 122890783 122891144 -76739006 + MER48 LTR ERV1 1 398 0 353 333 7 0 chr5 122891238 122891388 -76738762 + L2 LINE L2 2398 2548 -766 323 306 101 67 chr5 122891394 122891989 -76738161 + L2 LINE L2 2671 3271 -1 30 0 0 0 chr5 122892510 122892540 -76737610 + AT_rich Low_complexity Low_complexity 1 30 0 543 283 80 36 chr5 122892546 122892797 -76737353 + MIR SINE MIR 1 262 0 21 0 0 0 chr5 122893493 122893514 -76736636 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 122896659 122896683 -76733467 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr5 122898673 122898698 -76731452 + AT_rich Low_complexity Low_complexity 1 25 0 488 290 98 11 chr5 122899005 122899188 -76730962 - MIR SINE MIR 0 262 64 334 296 111 35 chr5 122899755 122899954 -76730196 - MIR SINE MIR -48 214 1 227 154 0 19 chr5 122900354 122900406 -76729744 + (CA)n Simple_repeat Simple_repeat 2 52 0 1415 255 87 39 chr5 122900509 122901513 -76728637 - L2 LINE L2 -1 3312 2207 21 0 0 0 chr5 122903473 122903494 -76726656 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr5 122905430 122905462 -76724688 + GC_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr5 122905687 122905712 -76724438 + GC_rich Low_complexity Low_complexity 1 25 0 195 129 0 0 chr5 122905969 122906000 -76724150 + (A)n Simple_repeat Simple_repeat 1 31 0 310 266 139 17 chr5 122908957 122909130 -76721020 + MIR SINE MIR 13 206 -56 189 255 96 11 chr5 122909198 122909292 -76720858 - MIR3 SINE MIR -47 161 60 2503 61 0 13 chr5 122909318 122909630 -76720520 - AluY SINE Alu -3 308 1 458 329 181 46 chr5 122909887 122909964 -76720186 + L2 LINE L2 279 344 -2970 489 232 113 54 chr5 122909964 122910132 -76720018 + MER5B DNA MER1_type 1 178 0 458 329 181 46 chr5 122910132 122911132 -76719018 + L2 LINE L2 344 1208 -2106 2224 122 3 0 chr5 122911132 122911444 -76718706 - AluSq SINE Alu 0 313 1 458 329 181 46 chr5 122911444 122911649 -76718501 + L2 LINE L2 1208 1384 -1930 2332 85 7 3 chr5 122911649 122911955 -76718195 + AluY SINE Alu 2 308 -3 458 329 181 46 chr5 122911955 122912237 -76717913 + L2 LINE L2 1384 2056 -1258 355 279 101 55 chr5 122912582 122912964 -76717186 + L2 LINE L2 2646 3053 -219 1330 254 117 12 chr5 122915523 122916332 -76713818 + L2 LINE L2 2414 3313 0 1135 214 51 109 chr5 122916642 122917035 -76713115 - MLT1A2 LTR MaLR -4 370 1 25 31 0 0 chr5 122917290 122917322 -76712828 + AT_rich Low_complexity Low_complexity 1 32 0 400 330 40 30 chr5 122918430 122918630 -76711520 - MIR SINE MIR -39 223 22 207 0 0 0 chr5 122919186 122919209 -76710941 + (CAA)n Simple_repeat Simple_repeat 2 24 0 709 279 63 76 chr5 122919225 122920103 -76710047 + L1MC4a LINE L1 4917 5636 -534 1578 136 43 11 chr5 122920103 122920383 -76709767 + L1MA6 LINE L1 6012 6300 0 709 279 63 76 chr5 122920383 122920504 -76709646 + L1MC4a LINE L1 5636 5757 -413 7663 39 24 3 chr5 122920637 122921904 -76708246 + L1PA5 LINE L1 4870 6154 0 1415 164 20 169 chr5 122921966 122922131 -76708019 + MLT1A2 LTR MaLR 1 62 -312 2221 133 0 0 chr5 122922131 122922433 -76707717 + AluSx SINE Alu 1 302 -10 1415 164 20 169 chr5 122922433 122922706 -76707444 + MLT1A2 LTR MaLR 62 374 0 27 96 0 0 chr5 122923006 122923089 -76707061 + AT_rich Low_complexity Low_complexity 1 83 0 521 291 92 22 chr5 122923284 122923555 -76706595 - L1ME LINE L1 -303 5818 5529 266 172 108 32 chr5 122923921 122924014 -76706136 + MLT1K LTR MaLR 400 499 -89 273 369 164 0 chr5 122924015 122924137 -76706013 + MER91A DNA MER1_type 5 146 -50 216 143 0 0 chr5 122924147 122924189 -76705961 + (T)n Simple_repeat Simple_repeat 1 42 0 456 214 0 10 chr5 122924279 122924377 -76705773 + MLT1K LTR MaLR 492 588 0 233 310 120 28 chr5 122924387 122924546 -76705604 - MIR3 SINE MIR -16 192 20 190 319 73 26 chr5 122925627 122925818 -76704332 + L2 LINE L2 1616 1815 -1499 934 338 157 11 chr5 122925926 122926550 -76703600 + L2 LINE L2 2054 2768 -546 377 354 24 0 chr5 122926566 122926693 -76703457 + L2 LINE L2 3184 3313 0 197 205 26 0 chr5 122928240 122928279 -76701871 - MIR SINE MIR 0 262 223 1047 180 5 36 chr5 122928306 122928403 -76701747 - MER5A DNA MER1_type -1 188 98 2399 136 68 22 chr5 122928403 122928816 -76701334 + MSTB1 LTR MaLR 1 432 0 1047 180 5 36 chr5 122928816 122928912 -76701238 - MER5A DNA MER1_type -91 98 1 365 281 49 69 chr5 122929179 122929382 -76700768 - MIR SINE MIR -52 210 12 1780 154 0 18 chr5 122929530 122929816 -76700334 - AluSx SINE Alu -31 281 1 219 186 0 0 chr5 122931296 122931339 -76698811 + (CTA)n Simple_repeat Simple_repeat 1 43 0 472 266 82 74 chr5 122931488 122931732 -76698418 - L2 LINE L2 -2 3311 3066 1562 177 46 3 chr5 122931734 122932174 -76697976 - MLT1D LTR MaLR -6 499 22 469 269 86 38 chr5 122932191 122932537 -76697613 - L2 LINE L2 -250 3063 2703 22 35 0 0 chr5 122932953 122932982 -76697168 + AT_rich Low_complexity Low_complexity 1 29 0 222 368 70 6 chr5 122933087 122933258 -76696892 - L3 LINE CR1 -1205 372 191 1551 248 15 0 chr5 122934863 122935198 -76694952 - MER58B DNA MER1_type 0 341 2 404 317 25 6 chr5 122935241 122935401 -76694749 - MIR SINE MIR 0 262 100 332 327 233 0 chr5 122935401 122935551 -76694599 + MER91A DNA MER1_type 1 185 -11 317 268 37 0 chr5 122935555 122935637 -76694513 - MIR SINE MIR -155 107 23 182 324 65 50 chr5 122936518 122936657 -76693493 + L2 LINE L2 2921 3061 -211 400 297 113 21 chr5 122938214 122938453 -76691697 + MIR SINE MIR 2 262 0 399 292 63 89 chr5 122938731 122939343 -76690807 - MLT1L LTR MaLR 0 615 29 3068 108 14 30 chr5 122939350 122939679 -76690471 - MSTA LTR MaLR 0 428 105 1880 140 18 7 chr5 122939679 122939985 -76690165 + AluSx SINE Alu 1 309 0 3068 108 14 30 chr5 122939985 122940089 -76690061 - MSTA LTR MaLR -323 105 1 740 266 116 40 chr5 122940818 122941198 -76688952 - MLT1I LTR MaLR 0 409 1 274 239 92 43 chr5 122941597 122941760 -76688390 + L1ME4a LINE L1 5921 6091 -30 2070 191 93 84 chr5 122941824 122942456 -76687694 + MLT1E1 LTR MaLR 1 638 -16 216 0 0 0 chr5 122942456 122942480 -76687670 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr5 122942549 122942571 -76687579 + AT_rich Low_complexity Low_complexity 1 22 0 665 193 153 11 chr5 122942574 122942750 -76687400 + L1ME3 LINE L1 5961 6161 -1 931 154 7 0 chr5 122942848 122942997 -76687153 - L1MB4 LINE L1 0 6180 6031 292 347 48 8 chr5 122943648 122943772 -76686378 + L2 LINE L2 3138 3266 -6 219 139 0 0 chr5 122944866 122944902 -76685248 + (TG)n Simple_repeat Simple_repeat 1 36 0 338 255 0 10 chr5 122945124 122945222 -76684928 - MIR SINE MIR -80 128 32 2344 88 3 3 chr5 122945818 122946124 -76684026 + AluSx SINE Alu 1 306 -6 325 281 126 7 chr5 122946141 122946276 -76683874 + MIR SINE MIR 36 186 -76 3229 70 28 48 chr5 122947105 122947562 -76682588 - LTR7 LTR ERV1 -2 448 1 727 262 34 21 chr5 122948459 122948692 -76681458 + MIR SINE MIR 3 238 -24 2375 35 0 28 chr5 122949356 122949644 -76680506 + AluY SINE Alu 3 282 -29 198 0 0 0 chr5 122949644 122949666 -76680484 + (TA)n Simple_repeat Simple_repeat 2 23 0 2909 16 0 0 chr5 122949845 122950162 -76679988 + AluYb8 SINE Alu 1 317 -1 2695 88 128 5 chr5 122950542 122950941 -76679209 - LTR7 LTR ERV1 -2 448 1 2316 97 0 13 chr5 122950947 122951257 -76678893 - AluSg SINE Alu -4 306 1 348 368 45 8 chr5 122951307 122951440 -76678710 + L2 LINE L2 3116 3253 -19 23 0 0 0 chr5 122951765 122951788 -76678362 + AT_rich Low_complexity Low_complexity 1 23 0 305 283 98 64 chr5 122952330 122952503 -76677647 - MER5A DNA MER1_type 0 189 11 1800 145 16 10 chr5 122952566 122952870 -76677280 + L1PB1 LINE L1 5808 6113 -38 4270 105 5 0 chr5 122954835 122955386 -76674764 - MER41A LTR ERV1 0 554 1 281 309 0 0 chr5 122955620 122955688 -76674462 - MIR3 SINE MIR -43 165 98 528 300 95 0 chr5 122955847 122956047 -76674103 - MIR SINE MIR -7 255 37 454 267 60 0 chr5 122958519 122958667 -76671483 - MIR SINE MIR -48 214 54 1083 180 34 19 chr5 122958794 122959000 -76671150 - MER3 DNA MER1_type 0 209 1 463 254 27 0 chr5 122959329 122959439 -76670711 + LTR33 LTR ERVL 5 117 -404 1548 324 62 45 chr5 122959527 122960876 -76669274 + ERVL LTR ERVL 3248 4964 -800 947 258 43 57 chr5 122961377 122961799 -76668351 + LTR16A LTR ERVL 19 434 -16 268 244 171 12 chr5 122961842 122961924 -76668226 + LTR33 LTR ERVL 423 517 -4 340 67 0 0 chr5 122962088 122962133 -76668017 - MADE1 DNA Mariner -35 45 1 183 42 0 0 chr5 122962270 122962294 -76667856 + (TC)n Simple_repeat Simple_repeat 2 25 0 * 279 0 0 0 chr5 122962293 122962324 -76667826 + (TG)n Simple_repeat Simple_repeat 2 32 0 34 102 0 0 chr5 122962449 122962567 -76667583 + AT_rich Low_complexity Low_complexity 1 118 0 614 300 84 17 chr5 122962613 122962970 -76667180 + L1MC4a LINE L1 5542 5922 -206 232 261 152 42 chr5 122962758 122963041 -76667109 + L1MB4 LINE L1 5695 6008 -172 * 188 333 0 0 chr5 122963561 122963618 -76666532 - MIR3 SINE MIR -49 159 103 660 202 39 17 chr5 122963970 122964148 -76666002 - MER53 DNA DNA 0 189 8 209 352 23 11 chr5 122964289 122964377 -76665773 + L3 LINE CR1 1354 1442 -135 329 281 8 16 chr5 122964378 122964499 -76665651 + L1MC/D LINE L1 5688 5807 -2001 855 188 23 7 chr5 122964726 122964985 -76665165 + MSTB LTR MaLR 37 370 -56 2074 151 6 6 chr5 122964989 122965301 -76664849 - AluSx SINE Alu 0 312 1 2569 64 0 0 chr5 122965701 122966012 -76664138 + AluY SINE Alu 1 311 0 226 219 156 0 chr5 122966451 122966515 -76663635 - MER116 DNA Mariner -2 78 5 1215 197 16 76 chr5 122966653 122966867 -76663283 - MLT1A1 LTR MaLR -15 350 159 2412 96 3 3 chr5 122966867 122967179 -76662971 - AluSp SINE Alu -1 312 1 1215 197 16 76 chr5 122967179 122967279 -76662871 - MLT1A1 LTR MaLR -206 159 55 2681 118 11 0 chr5 122967288 122967645 -76662505 + MER1A DNA MER1_type 35 395 -134 2363 122 14 27 chr5 122967645 122968014 -76662136 - THE1B LTR MaLR 0 364 1 3259 71 0 5 chr5 122968014 122968422 -76661728 - THE1B-int LTR MaLR 0 1580 1175 612 297 96 13 chr5 122968460 122968699 -76661451 - MIR SINE MIR -2 260 2 738 220 91 8 chr5 122970193 122970401 -76659749 - L1ME3A LINE L1 -89 6076 5858 222 242 32 0 chr5 122970438 122970500 -76659650 + GA-rich Low_complexity Low_complexity 2 65 0 437 287 9 19 chr5 122971696 122971804 -76658346 - L2 LINE L2 -27 3286 3180 242 157 59 0 chr5 122971848 122971899 -76658251 - MLT2B1 LTR ERVL -10 510 457 3681 275 112 60 chr5 122971899 122973784 -76656366 - L2 LINE L2 -202 3111 1127 297 154 26 13 chr5 122973880 122973958 -76656192 + CT-rich Low_complexity Low_complexity 2 80 0 265 314 93 8 chr5 122974030 122974148 -76656002 - L2 LINE L2 -3 3310 3183 2018 245 74 87 chr5 122974269 122974866 -76655284 + MLT1G LTR MaLR 7 590 0 599 32 54 0 chr5 122975273 122975366 -76654784 + (TCTA)n Simple_repeat Simple_repeat 1 98 0 4496 85 7 7 chr5 122975415 122976004 -76654146 - Charlie3 DNA MER1_type -4 2706 2118 2153 201 37 77 chr5 122976008 122976580 -76653570 - MLT2B3 LTR ERVL -5 549 1 16168 100 4 3 chr5 122976580 122978697 -76651453 - Charlie3 DNA MER1_type -588 2122 4 1732 115 50 4 chr5 122978699 122978959 -76651191 - MER7A DNA MER2_type -75 271 2 2582 48 7 0 chr5 122979083 122979392 -76650758 - AluY SINE Alu 0 311 1 2374 94 3 7 chr5 122979948 122980257 -76649893 - AluSp SINE Alu -5 308 1 766 254 34 38 chr5 122981593 122981857 -76648293 + MLT1K LTR MaLR 326 588 0 1350 153 146 7 chr5 122981963 122982271 -76647879 + L1MB4 LINE L1 5810 6160 -20 456 118 24 12 chr5 122982313 122982398 -76647752 + L1MB8 LINE L1 6093 6178 0 2240 94 3 3 chr5 122982588 122982885 -76647265 + AluSx SINE Alu 1 297 -15 182 364 73 9 chr5 122983138 122983248 -76646902 + L3 LINE CR1 1216 1332 -245 1874 174 26 0 chr5 122983255 122983559 -76646591 + AluJb SINE Alu 1 312 0 840 182 0 0 chr5 122983594 122983726 -76646424 + FLAM_C SINE Alu 1 132 -1 402 383 78 5 chr5 122983794 122984011 -76646139 + L3 LINE CR1 1342 1574 -3 2287 107 0 0 chr5 122984272 122984572 -76645578 - AluSg SINE Alu -10 300 1 1400 218 116 31 chr5 122986192 122986392 -76643758 - L1M LINE L1 -741 5423 5241 2017 139 3 10 chr5 122986392 122986694 -76643456 - AluJb SINE Alu -12 300 1 1400 218 116 31 chr5 122986694 122987068 -76643082 - L1M LINE L1 -923 5241 4798 243 79 0 0 chr5 122987128 122987166 -76642984 + (A)n Simple_repeat Simple_repeat 1 38 0 516 68 0 0 chr5 122987341 122987414 -76642736 - AluSq SINE Alu -6 307 235 1143 148 0 0 chr5 122987414 122987583 -76642567 - AluSq SINE Alu -144 169 1 553 298 164 35 chr5 122987865 122988234 -76641916 + L2 LINE L2 2681 3001 -312 1666 110 19 91 chr5 122988234 122988405 -76641745 - AluY SINE Alu -16 295 156 1990 85 4 0 chr5 122988405 122988663 -76641487 - AluY SINE Alu -2 309 51 1666 110 19 91 chr5 122988663 122988809 -76641341 - AluY SINE Alu -155 156 1 553 298 164 35 chr5 122988809 122988856 -76641294 + L2 LINE L2 3001 3041 -272 1103 218 89 34 chr5 122988856 122989103 -76641047 + MER2 DNA MER2_type 1 272 -72 2294 101 13 0 chr5 122989103 122989409 -76640741 - AluSg SINE Alu 0 310 1 1103 218 89 34 chr5 122989409 122989487 -76640663 + MER2 DNA MER2_type 272 344 0 553 298 164 35 chr5 122989487 122989644 -76640506 + L2 LINE L2 3041 3312 -1 2210 75 11 7 chr5 122989878 122990160 -76639990 - AluY SINE Alu -12 299 17 2309 97 3 0 chr5 122990866 122991165 -76638985 + AluSx SINE Alu 1 300 -12 797 172 14 7 chr5 122991569 122991681 -76638469 + MER2 DNA MER2_type 2 117 -228 1831 155 21 3 chr5 122991681 122991972 -76638178 - AluSx SINE Alu -16 296 1 797 172 14 7 chr5 122991972 122992004 -76638146 + MER2 DNA MER2_type 117 147 -198 681 147 21 49 chr5 122992049 122992180 -76637970 + MER2 DNA MER2_type 136 264 -81 1654 175 11 0 chr5 122992180 122992465 -76637685 - AluJo SINE Alu -22 290 3 681 147 21 49 chr5 122992465 122992476 -76637674 + MER2 DNA MER2_type 264 274 -71 372 191 0 83 chr5 122994243 122994327 -76635823 + MER2 DNA MER2_type 268 344 -1 321 356 126 9 chr5 122994327 122994557 -76635593 + L1M4 LINE L1 4033 4289 -1857 1406 142 0 23 chr5 122994666 122994884 -76635266 + AluJo SINE Alu 68 280 -32 192 125 0 0 chr5 122994906 122994938 -76635212 + (A)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr5 122994956 122994979 -76635171 + AT_rich Low_complexity Low_complexity 1 23 0 2156 120 0 10 chr5 122995032 122995332 -76634818 + AluSx SINE Alu 1 297 -15 910 208 0 0 chr5 122995696 122995855 -76634295 - FRAM SINE Alu -13 163 5 243 269 56 28 chr5 122995859 122995967 -76634183 + L1MC/D LINE L1 5694 5804 -2004 24 53 0 0 chr5 122995989 122996027 -76634123 + AT_rich Low_complexity Low_complexity 1 38 0 2198 123 0 0 chr5 122996038 122996338 -76633812 + AluSg SINE Alu 1 300 -10 185 179 0 36 chr5 122996386 122996442 -76633708 + (TATG)n Simple_repeat Simple_repeat 2 55 0 2307 90 0 7 chr5 122996641 122996940 -76633210 + AluSq SINE Alu 1 297 -16 23 68 0 0 chr5 122996953 122996997 -76633153 + AT_rich Low_complexity Low_complexity 1 44 0 30 0 0 0 chr5 122997148 122997178 -76632972 + AT_rich Low_complexity Low_complexity 1 30 0 1217 179 114 18 chr5 122997222 122997495 -76632655 + AluSx SINE Alu 1 299 -13 2362 112 0 0 chr5 122997498 122997810 -76632340 + AluSx SINE Alu 1 312 0 982 163 7 0 chr5 122997810 122997963 -76632187 + AluSg/x SINE Alu 134 287 -25 329 238 101 129 chr5 122998012 122998097 -76632053 - L1ME4a LINE L1 -239 5882 5796 2214 111 10 0 chr5 122998097 122998386 -76631764 - AluSx SINE Alu -20 292 1 329 238 101 129 chr5 122998386 122998586 -76631564 - L1ME4a LINE L1 -325 5796 5605 24 53 0 0 chr5 122999140 122999178 -76630972 + AT_rich Low_complexity Low_complexity 1 38 0 2154 133 0 3 chr5 122999582 122999891 -76630259 + AluSx SINE Alu 1 308 -4 1951 134 0 17 chr5 123000391 123000682 -76629468 - AluSx SINE Alu -11 301 16 4627 157 47 53 chr5 123000789 123001568 -76628582 - L1MC1 LINE L1 -66 6267 5485 853 151 7 0 chr5 123001568 123001707 -76628443 - FLAM_C SINE Alu -3 140 1 4627 157 47 53 chr5 123001707 123001792 -76628358 - L1MC1 LINE L1 -848 5485 5401 2274 106 7 0 chr5 123001792 123002095 -76628055 - AluSx SINE Alu -7 305 1 4627 157 47 53 chr5 123002095 123002197 -76627953 - L1MC1 LINE L1 -932 5401 5301 1260 104 0 23 chr5 123002197 123002370 -76627780 - L1PA10 LINE L1 -3 6165 5997 4627 157 47 53 chr5 123002370 123002412 -76627738 - L1MC1 LINE L1 -1032 5301 5260 1525 214 18 0 chr5 123002412 123002697 -76627453 - AluJo SINE Alu -22 290 1 2303 112 0 0 chr5 123003108 123003413 -76626737 - AluSq SINE Alu -8 305 1 2117 120 0 0 chr5 123003477 123003760 -76626390 - AluY SINE Alu -28 283 1 5155 144 16 56 chr5 123003767 123003814 -76626336 - L1MB3 LINE L1 0 6183 6136 1325 160 152 30 chr5 123003814 123004083 -76626067 - AluJo SINE Alu -10 302 1 5155 144 16 56 chr5 123004083 123004915 -76625235 - L1MB3 LINE L1 -47 6136 5350 2217 113 3 3 chr5 123004915 123005224 -76624926 - AluSp SINE Alu -4 309 1 5155 144 16 56 chr5 123005224 123005447 -76624703 - L1MB3 LINE L1 -833 5350 5120 859 279 13 9 chr5 123005697 123005930 -76624220 + MIR SINE MIR 3 236 -26 870 179 0 0 chr5 123006205 123006350 -76623800 + MLT1B LTR MaLR 193 337 -53 1378 123 13 146 chr5 123006350 123006467 -76623683 + AluJb SINE Alu 21 152 -160 2106 115 4 0 chr5 123006467 123006746 -76623404 + AluSx SINE Alu 1 280 -32 225 83 0 0 chr5 123006746 123006782 -76623368 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1378 123 13 146 chr5 123006782 123006794 -76623356 + AluJb SINE Alu 151 163 -149 2291 113 0 0 chr5 123006794 123007095 -76623055 + AluSx SINE Alu 1 301 -11 1378 123 13 146 chr5 123007095 123007243 -76622907 + AluJb SINE Alu 163 258 -54 2488 83 0 0 chr5 123007243 123007545 -76622605 - AluSg SINE Alu -7 303 2 1378 123 13 146 chr5 123007545 123007573 -76622577 + AluJb SINE Alu 258 288 -24 180 77 0 0 chr5 123007610 123007636 -76622514 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 2029 151 0 0 chr5 123007988 123008293 -76621857 - AluJb SINE Alu -7 305 1 1124 195 0 66 chr5 123008808 123009064 -76621086 - AluSx SINE Alu -73 239 1 207 314 129 43 chr5 123009536 123009606 -76620544 + MIR SINE MIR 2 77 -185 1977 128 50 0 chr5 123009664 123009945 -76620205 - AluSx SINE Alu -17 295 1 237 280 229 0 chr5 123009968 123010086 -76620064 + MIR SINE MIR 100 244 -18 248 276 40 26 chr5 123011033 123011109 -76619041 + L2 LINE L2 2985 3061 -211 202 143 0 24 chr5 123011314 123011356 -76618794 + (CAA)n Simple_repeat Simple_repeat 2 42 0 623 242 36 64 chr5 123011913 123012132 -76618018 + MIR SINE MIR 33 245 -17 209 346 89 0 chr5 123012269 123012370 -76617780 + L2 LINE L2 3139 3248 -24 260 313 12 12 chr5 123012384 123012467 -76617683 + MIR SINE MIR 32 114 -94 1526 172 0 75 chr5 123014127 123014458 -76615692 - AluJb SINE Alu -5 307 2 2327 103 0 0 chr5 123014496 123014798 -76615352 - AluSx SINE Alu -10 302 1 2274 108 0 0 chr5 123014881 123015178 -76614972 - AluSg SINE Alu -13 297 1 373 207 46 11 chr5 123015414 123015501 -76614649 + MIR SINE MIR 103 192 -70 1243 177 0 5 chr5 123015505 123015720 -76614430 + AluJo SINE Alu 98 311 -1 1140 112 0 37 chr5 123016346 123016534 -76613616 + AluSg/x SINE Alu 127 307 -3 1316 184 0 51 chr5 123016547 123016803 -76613347 - AluJo SINE Alu -49 263 21 422 215 178 37 chr5 123016827 123016885 -76613265 - L1MC4 LINE L1 0 8042 7994 2303 93 0 13 chr5 123016885 123017186 -76612964 + AluSx SINE Alu 1 297 -15 422 215 178 37 chr5 123017186 123017318 -76612832 - L1MC4 LINE L1 -48 7994 7825 286 122 0 20 chr5 123017318 123017367 -76612783 + LTR54B LTR ERV1 1 48 -450 494 172 115 11 chr5 123017400 123017487 -76612663 + FLAM_A SINE Alu 18 113 -29 2407 97 0 3 chr5 123017490 123017800 -76612350 + AluSg SINE Alu 1 309 -1 297 0 0 0 chr5 123017800 123017833 -76612317 + (CA)n Simple_repeat Simple_repeat 2 34 0 821 212 144 31 chr5 123017852 123017995 -76612155 + LTR54B LTR ERV1 173 298 -200 2168 99 14 3 chr5 123017995 123018289 -76611861 - AluSg SINE Alu -13 297 1 821 212 144 31 chr5 123018289 123018437 -76611713 + LTR54B LTR ERV1 298 497 -1 648 188 137 60 chr5 123018437 123018671 -76611479 - L1MC4 LINE L1 -215 7827 7576 1696 138 52 31 chr5 123018706 123018996 -76611154 - AluJo SINE Alu -16 296 1 432 232 87 7 chr5 123019358 123019496 -76610654 + MLT1F LTR MaLR 388 536 -6 419 305 142 37 chr5 123019707 123020172 -76609978 + L2 LINE L2 1890 2403 -911 222 188 62 21 chr5 123020285 123020333 -76609817 + L2 LINE L2 3200 3249 -64 349 250 185 20 chr5 123020742 123020942 -76609208 + L1ME4a LINE L1 5787 6019 -102 1482 150 56 82 chr5 123020961 123021154 -76608996 - AluJb SINE Alu -14 298 114 225 0 0 0 chr5 123021154 123021179 -76608971 + (TG)n Simple_repeat Simple_repeat 2 26 0 1482 150 56 82 chr5 123021179 123021291 -76608859 - AluJb SINE Alu -198 114 1 2022 110 0 4 chr5 123021664 123021936 -76608214 + AluSx SINE Alu 1 271 -41 538 101 56 11 chr5 123022111 123022200 -76607950 - L1MB3 LINE L1 -9 6174 6082 194 0 0 37 chr5 123022257 123022284 -76607866 + (TCCCC)n Simple_repeat Simple_repeat 5 30 0 2036 108 7 14 chr5 123022285 123022580 -76607570 - AluSp SINE Alu -20 293 1 188 108 0 27 chr5 123022587 123022624 -76607526 + (TTTTC)n Simple_repeat Simple_repeat 4 39 0 514 120 0 20 chr5 123022703 123022803 -76607347 + (TTCC)n Simple_repeat Simple_repeat 3 100 0 267 59 0 0 chr5 123022803 123022837 -76607313 + (TCCCC)n Simple_repeat Simple_repeat 2 35 0 1669 132 0 86 chr5 123022838 123023142 -76607008 - AluJb SINE Alu -34 278 1 2340 97 0 25 chr5 123023147 123023466 -76606684 - AluSq SINE Alu -1 312 2 269 26 26 0 chr5 123023510 123023548 -76606602 + (TA)n Simple_repeat Simple_repeat 1 39 0 318 195 230 0 chr5 123024849 123024936 -76605214 - L2 LINE L2 -6 3307 3201 747 230 80 38 chr5 123024986 123025199 -76604951 - MIR SINE MIR 0 262 41 325 336 0 9 chr5 123025226 123025342 -76604808 - MIR SINE MIR -62 200 86 2085 122 0 3 chr5 123025939 123026226 -76603924 + AluSq SINE Alu 1 286 -27 2182 100 14 0 chr5 123026238 123026529 -76603621 + AluSg SINE Alu 1 295 -15 243 0 0 0 chr5 123026530 123026557 -76603593 + (TA)n Simple_repeat Simple_repeat 1 27 0 1761 157 66 0 chr5 123026686 123026960 -76603190 - AluJo SINE Alu -20 292 1 24 32 0 0 chr5 123027474 123027505 -76602645 + AT_rich Low_complexity Low_complexity 1 31 0 493 303 193 16 chr5 123027898 123028400 -76601750 - L1MC4a LINE L1 -1903 5905 5315 2331 106 3 0 chr5 123028415 123028717 -76601433 - AluSp SINE Alu -10 303 1 572 131 36 0 chr5 123028860 123028944 -76601206 + Tigger5 DNA MER2_type 2237 2323 0 302 280 81 92 chr5 123029040 123029228 -76600922 - L1MC4a LINE L1 -1083 5063 4877 2342 90 13 3 chr5 123029228 123029538 -76600612 + AluSp SINE Alu 1 313 0 302 280 81 92 chr5 123029538 123029610 -76600540 - L1MC4a LINE L1 -1269 4877 4806 2246 106 3 0 chr5 123029642 123029945 -76600205 - AluSg SINE Alu -6 304 1 538 165 47 0 chr5 123029980 123030065 -76600085 + AluJ/FLAM SINE Alu 1 89 -223 238 240 91 41 chr5 123030311 123030432 -76599718 - L1 LINE L1 -1796 4350 4224 305 235 92 20 chr5 123030520 123030618 -76599532 + MIR SINE MIR 158 262 0 266 222 49 25 chr5 123032724 123032805 -76597345 + MLT1D LTR MaLR 3 85 -420 770 199 46 7 chr5 123033008 123033159 -76596991 + MLT1C LTR MaLR 311 467 0 2251 83 7 0 chr5 123033364 123033654 -76596496 + AluSg1 SINE Alu 2 293 -16 620 217 0 8 chr5 123034380 123034500 -76595650 - FLAM_A SINE Alu -18 124 6 2118 123 17 3 chr5 123034785 123035087 -76595063 - AluSx SINE Alu -6 306 1 21 0 0 0 chr5 123035531 123035552 -76594598 + AT_rich Low_complexity Low_complexity 1 21 0 2310 100 7 3 chr5 123036150 123036460 -76593690 + AluSp SINE Alu 1 311 -2 955 139 96 72 chr5 123036506 123036714 -76593436 - AluJo SINE Alu -14 298 86 25 31 0 0 chr5 123037391 123037423 -76592727 + AT_rich Low_complexity Low_complexity 1 32 0 219 102 17 34 chr5 123037437 123037496 -76592654 + (TA)n Simple_repeat Simple_repeat 1 58 0 727 182 94 18 chr5 123037738 123037908 -76592242 + MER20 DNA MER1_type 36 218 -1 312 259 112 35 chr5 123037909 123038025 -76592125 + L2 LINE L2 3189 3313 0 221 274 0 0 chr5 123038039 123038090 -76592060 + L2 LINE L2 3213 3263 -9 673 71 61 0 chr5 123041421 123041519 -76588631 + L1PA11 LINE L1 6071 6174 0 180 0 0 0 chr5 123041591 123041611 -76588539 + (TG)n Simple_repeat Simple_repeat 2 21 0 450 0 0 0 chr5 123041663 123041713 -76588437 + (TG)n Simple_repeat Simple_repeat 2 51 0 2202 89 0 14 chr5 123041733 123042026 -76588124 + AluSc SINE Alu 1 289 -20 25 31 0 0 chr5 123043240 123043272 -76586878 + AT_rich Low_complexity Low_complexity 1 32 0 2425 93 0 0 chr5 123043603 123043903 -76586247 + AluSx SINE Alu 1 300 -12 1696 168 3 30 chr5 123044112 123044410 -76585740 - AluJb SINE Alu -22 290 1 882 212 39 0 chr5 123044410 123044589 -76585561 + MER5A DNA MER1_type 4 189 0 1955 85 54 0 chr5 123044688 123044946 -76585204 + AluY SINE Alu 27 298 -13 2186 91 3 17 chr5 123045495 123045793 -76584357 - AluSc SINE Alu -15 294 1 227 245 61 0 chr5 123046070 123046119 -76584031 + L2 LINE L2 3217 3268 -4 2071 122 7 7 chr5 123046217 123046513 -76583637 - AluSx SINE Alu -16 296 1 1644 99 0 14 chr5 123046685 123046907 -76583243 - AluSx SINE Alu -93 219 1 2137 107 0 30 chr5 123046976 123047276 -76582874 - AluSx SINE Alu -21 291 1 1774 135 73 21 chr5 123048228 123048568 -76581582 + MER46B DNA MER2_type 2 234 -2 2105 80 0 0 chr5 123049255 123049519 -76580631 - AluY SINE Alu -47 264 1 378 256 110 61 chr5 123049601 123049765 -76580385 - MIR SINE MIR -87 175 4 2305 112 3 3 chr5 123050266 123050578 -76579572 - AluSq SINE Alu 0 313 2 422 304 69 78 chr5 123050953 123051505 -76578645 + L1M4 LINE L1 2664 3210 -2936 1400 93 10 10 chr5 123051579 123051773 -76578377 + AluSx SINE Alu 1 194 -118 1792 133 76 116 chr5 123051773 123052248 -76577902 + LTR2B LTR ERV1 6 461 -29 5226 70 11 24 chr5 123052250 123053090 -76577060 + Harlequin LTR ERV1 1784 2612 -4284 289 221 35 0 chr5 123053191 123053277 -76576873 - L1ME LINE L1 -313 5857 5769 234 0 0 0 chr5 123053278 123053304 -76576846 + (CA)n Simple_repeat Simple_repeat 2 27 0 2100 112 3 0 chr5 123053502 123053796 -76576354 + AluSq SINE Alu 2 296 -17 2185 273 40 36 chr5 123053888 123054176 -76575974 - L2 LINE L2 -872 2442 2157 2529 43 0 3 chr5 123054176 123054479 -76575671 + AluY SINE Alu 1 302 -9 2185 273 40 36 chr5 123054479 123054636 -76575514 - L2 LINE L2 -1157 2157 2002 2504 58 0 0 chr5 123054636 123054931 -76575219 + AluY SINE Alu 1 295 -16 2185 273 40 36 chr5 123054931 123055317 -76574833 - L2 LINE L2 -1312 2002 1607 216 97 0 0 chr5 123055866 123055897 -76574253 + (T)n Simple_repeat Simple_repeat 1 31 0 2420 85 13 0 chr5 123056120 123056426 -76573724 + AluSg SINE Alu 1 310 0 2406 80 0 0 chr5 123056515 123056817 -76573333 + AluY SINE Alu 1 302 -9 203 333 167 40 chr5 123057084 123057210 -76572940 - MIR3 SINE MIR -66 142 1 2368 36 40 20 chr5 123057405 123057706 -76572444 + AluY SINE Alu 1 307 -4 250 382 20 0 chr5 123057706 123057808 -76572342 - L2 LINE L2 -20 3293 3190 2081 141 0 0 chr5 123058141 123058438 -76571712 + AluSx SINE Alu 1 297 -15 466 302 37 81 chr5 123059128 123059645 -76570505 - L1MC4a LINE L1 0 6121 5625 2265 113 0 0 chr5 123059836 123060137 -76570013 - AluSg SINE Alu -9 301 1 380 384 113 4 chr5 123060209 123060475 -76569675 + L2 LINE L2 2683 2977 -337 257 308 187 44 chr5 123060543 123060725 -76569425 + L2 LINE L2 3101 3308 -5 846 242 14 28 chr5 123060756 123060967 -76569183 - MIR SINE MIR -42 220 13 2323 115 0 0 chr5 123061031 123061335 -76568815 + AluSx SINE Alu 1 304 -8 21 71 0 0 chr5 123061512 123061554 -76568596 + AT_rich Low_complexity Low_complexity 1 42 0 335 254 39 39 chr5 123061591 123061721 -76568429 - L1MC4a LINE L1 -539 5582 5453 230 260 78 0 chr5 123061887 123061964 -76568186 - MIR SINE MIR -99 163 81 303 288 54 27 chr5 123063150 123063261 -76566889 + MIR SINE MIR 127 240 -22 2169 134 0 6 chr5 123063332 123063645 -76566505 + AluSq SINE Alu 1 311 -2 1867 166 0 0 chr5 123064974 123065263 -76564887 - Charlie3 DNA MER1_type -2418 292 4 1553 123 50 4 chr5 123065265 123065525 -76564625 - MER7A DNA MER2_type -75 271 2 2620 52 0 0 chr5 123065643 123065951 -76564199 - AluY SINE Alu -3 308 1 2365 97 3 7 chr5 123066507 123066816 -76563334 - AluSp SINE Alu -5 308 1 22 35 0 0 chr5 123068494 123068523 -76561627 + AT_rich Low_complexity Low_complexity 1 29 0 206 217 0 96 chr5 123068957 123069040 -76561110 + MIR SINE MIR 146 220 -42 234 0 0 0 chr5 123070271 123070297 -76559853 + (A)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr5 123074284 123074306 -76555844 + AT_rich Low_complexity Low_complexity 1 22 0 420 297 111 78 chr5 123074557 123075285 -76554865 - L2 LINE L2 0 3313 2557 359 248 98 73 chr5 123075322 123075568 -76554582 - L1MC4a LINE L1 -795 5351 5100 412 332 23 9 chr5 123075872 123076086 -76554064 - L1MC4a LINE L1 -1487 4659 4443 180 0 0 0 chr5 123077544 123077564 -76552586 + (TTA)n Simple_repeat Simple_repeat 1 20 0 269 237 140 35 chr5 123078062 123078176 -76551974 + MLT1J LTR MaLR 9 134 -377 227 320 0 0 chr5 123078686 123078764 -76551386 - MIR SINE MIR -29 233 156 5529 200 183 24 chr5 123078768 123080221 -76549929 + MER52A LTR ERV1 1 1755 0 200 235 20 0 chr5 123080255 123080306 -76549844 - MIR SINE MIR -140 122 71 882 240 25 9 chr5 123081765 123081993 -76548157 + MIR SINE MIR 23 255 -7 204 271 168 26 chr5 123083127 123083282 -76546868 - L2 LINE L2 -230 3042 2866 1559 126 95 0 chr5 123084420 123084705 -76545445 - MER46B DNA MER2_type 0 236 50 295 311 131 14 chr5 123084812 123084956 -76545194 - MIR3 SINE MIR -37 171 13 252 250 15 0 chr5 123085553 123085621 -76544529 + MLT1K LTR MaLR 518 586 -2 390 291 49 60 chr5 123085970 123086184 -76543966 + MIR SINE MIR 50 259 -3 212 0 36 0 chr5 123086410 123086438 -76543712 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 481 301 135 10 chr5 123087318 123087511 -76542639 - MIR SINE MIR -6 256 40 218 264 110 55 chr5 123088699 123088790 -76541360 - L2 LINE L2 -8 3264 3169 790 173 76 137 chr5 123089527 123089857 -76540293 - MLT1F LTR MaLR -247 295 1 418 100 33 0 chr5 123090095 123090186 -76539964 + Alu SINE Alu 222 314 0 1788 172 3 31 chr5 123090814 123091133 -76539017 - AluJb SINE Alu -2 310 1 436 183 51 0 chr5 123091244 123091381 -76538769 - MER69 DNA AcHobo -53 2473 2330 1731 272 56 8 chr5 123091390 123091912 -76538238 - MER69 DNA AcHobo -679 547 1 2403 106 3 0 chr5 123094279 123094591 -76535559 - AluSp SINE Alu 0 313 1 549 296 127 15 chr5 123095333 123095626 -76534524 + L2 LINE L2 2941 3267 -5 1626 129 96 18 chr5 123095694 123095966 -76534184 - AluSx SINE Alu -19 293 1 259 32 0 0 chr5 123096469 123096500 -76533650 + L1MA2 LINE L1 6179 6209 -95 6883 55 45 0 chr5 123096507 123096835 -76533315 - L1PA7 LINE L1 -8 6146 5834 2340 98 0 0 chr5 123096835 123097132 -76533018 - AluSg SINE Alu -13 297 1 6883 55 45 0 chr5 123097132 123098025 -76532125 - L1PA7 LINE L1 -320 5834 4916 330 309 42 18 chr5 123098052 123098220 -76531930 + L2 LINE L2 2712 2883 -431 189 375 62 28 chr5 123098647 123099079 -76531071 - L2 LINE L2 -390 2924 2478 711 296 118 39 chr5 123099114 123099598 -76530552 + L3 LINE CR1 1028 1549 -28 339 330 70 0 chr5 123100255 123100370 -76529780 - MIR SINE MIR -128 134 12 516 241 47 0 chr5 123100545 123100715 -76529435 + Charlie5 DNA MER1_type 2447 2624 0 911 226 11 5 chr5 123102680 123102866 -76527284 - MIR SINE MIR -1 261 75 2241 98 23 0 chr5 123103814 123104119 -76526031 - AluSp SINE Alu -1 312 1 1148 222 3 32 chr5 123104260 123104544 -76525606 + MER93b LTR ERV1 98 373 0 716 319 53 46 chr5 123105469 123106172 -76523978 + L1MEc LINE L1 2032 2698 -3517 914 116 6 17 chr5 123106270 123106443 -76523707 + (TTCC)n Simple_repeat Simple_repeat 3 173 0 482 57 14 0 chr5 123106450 123106520 -76523630 + (TCTA)n Simple_repeat Simple_repeat 3 73 0 267 79 0 0 chr5 123106685 123106723 -76523427 + (TATG)n Simple_repeat Simple_repeat 4 41 0 2263 113 0 0 chr5 123106852 123107154 -76522996 - AluSx SINE Alu -10 302 1 300 263 10 61 chr5 123107215 123107314 -76522836 - L1ME LINE L1 -465 5656 5563 319 246 92 0 chr5 123107903 123108033 -76522117 - MER103 DNA DNA -17 149 8 1990 102 0 11 chr5 123108068 123108343 -76521807 + AluSg1 SINE Alu 1 272 -37 19700 77 18 5 chr5 123108443 123111155 -76518995 + Harlequin LTR ERV1 2964 5710 -1186 627 135 0 27 chr5 123111154 123111265 -76518885 + Harlequin LTR ERV1 6784 6891 -5 * 2244 141 94 67 chr5 123111268 123111745 -76518405 + LTR2B LTR ERV1 1 490 0 729 105 18 18 chr5 123111745 123111859 -76518291 + AluSg/x SINE Alu 187 300 -12 484 200 14 14 chr5 123111859 123112004 -76518146 - MER53 DNA DNA -41 148 4 706 298 72 11 chr5 123112194 123112543 -76517607 + L1ME LINE L1 36 405 -5991 2030 170 0 0 chr5 123112993 123113305 -76516845 - AluSx SINE Alu 0 312 1 25 0 0 0 chr5 123113388 123113413 -76516737 + AT_rich Low_complexity Low_complexity 1 25 0 411 368 96 25 chr5 123113938 123114200 -76515950 + L1ME LINE L1 4826 5133 -1082 2203 114 0 13 chr5 123114200 123114516 -76515634 - AluSx SINE Alu 0 312 1 411 368 96 25 chr5 123114516 123114690 -76515460 + L1ME LINE L1 5133 5293 -922 548 29 14 0 chr5 123114699 123114769 -76515381 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 308 334 43 22 chr5 123114782 123115167 -76514983 + L1ME LINE L1 5335 5722 -468 536 266 24 18 chr5 123115643 123115812 -76514338 + MER104 DNA Tc2 5 174 -6 315 294 0 26 chr5 123116200 123116326 -76513824 + MIR SINE MIR 26 141 -67 588 286 67 24 chr5 123116889 123117099 -76513051 - L3b LINE CR1 -71 1512 1294 181 381 142 54 chr5 123117290 123117642 -76512508 + L2 LINE L2 2890 3272 0 288 137 0 0 chr5 123119434 123119485 -76510665 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 228 295 0 42 chr5 123119836 123119931 -76510219 + MIR SINE MIR 151 241 -21 189 283 26 80 chr5 123119969 123120082 -76510068 - MER5A DNA MER1_type -77 112 6 25 31 0 0 chr5 123120198 123120230 -76509920 + AT_rich Low_complexity Low_complexity 1 32 0 600 321 43 22 chr5 123121438 123121873 -76508277 - MLT1K LTR MaLR -109 479 1 21 57 0 0 chr5 123122128 123122163 -76507987 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr5 123122702 123122722 -76507428 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1150 281 68 41 chr5 123123201 123123834 -76506316 + L1MC4a LINE L1 5254 5903 -1905 25 31 0 0 chr5 123123986 123124018 -76506132 + AT_rich Low_complexity Low_complexity 1 32 0 359 301 105 44 chr5 123125498 123125906 -76504244 + MLT1K LTR MaLR 70 502 -86 403 267 24 65 chr5 123126049 123126250 -76503900 - MIR SINE MIR -46 216 23 23 0 0 0 chr5 123126899 123126922 -76503228 + AT_rich Low_complexity Low_complexity 1 23 0 347 387 27 0 chr5 123127605 123127755 -76502395 - MIR SINE MIR -59 203 50 228 239 30 60 chr5 123127969 123128036 -76502114 - L2 LINE L2 -1 3312 3248 2106 109 3 7 chr5 123128464 123128889 -76501261 - AluSx SINE Alu 0 424 1 297 335 25 32 chr5 123129043 123129201 -76500949 - MIR SINE MIR -67 195 39 938 285 36 22 chr5 123129296 123129710 -76500440 + MER113 DNA MER1_type? 59 478 -43 31 26 0 0 chr5 123130344 123130382 -76499768 + AT_rich Low_complexity Low_complexity 1 38 0 411 323 16 15 chr5 123132156 123132285 -76497865 + MIR SINE MIR 15 144 -64 378 337 0 6 chr5 123133778 123133941 -76496209 + (TG)n Simple_repeat Simple_repeat 2 163 0 607 240 58 18 chr5 123134488 123134659 -76495491 + MIR SINE MIR 47 224 -38 685 263 132 0 chr5 123135064 123135277 -76494873 + MIR SINE MIR 12 252 -10 519 311 149 9 chr5 123135714 123135936 -76494214 + MIR SINE MIR 4 256 -6 1037 193 0 0 chr5 123136145 123136321 -76493829 - MER45A DNA AcHobo 0 178 3 2411 76 0 0 chr5 123137829 123138120 -76492030 - AluY SINE Alu -20 291 1 1144 251 85 74 chr5 123138716 123139255 -76490895 - L1MC/D LINE L1 -2000 5808 5264 710 299 26 25 chr5 123139546 123139931 -76490219 - LTR16A LTR ERVL 0 450 16 856 262 65 11 chr5 123140700 123140979 -76489171 + LTR16C LTR ERVL 170 463 -28 365 278 24 40 chr5 123142234 123142360 -76487790 - MIR SINE MIR -30 232 109 1189 257 92 32 chr5 123142732 123143136 -76487014 - LTR16C LTR ERVL 0 491 64 2113 108 0 33 chr5 123143440 123143747 -76486403 + AluY SINE Alu 1 297 -14 205 300 0 0 chr5 123144720 123144770 -76485380 - L2 LINE L2 -50 3263 3214 715 307 92 50 chr5 123144798 123145207 -76484943 + MLT1H LTR MaLR 39 472 -77 2289 116 0 3 chr5 123145207 123145518 -76484632 + AluSp SINE Alu 1 310 -3 715 307 92 50 chr5 123145518 123145584 -76484566 + MLT1H LTR MaLR 472 534 -15 212 59 29 0 chr5 123145607 123145641 -76484509 + (TA)n Simple_repeat Simple_repeat 1 35 0 326 326 28 33 chr5 123145729 123145889 -76484261 - L2 LINE L2 -321 2992 2832 1975 155 39 55 chr5 123145889 123146270 -76483880 + THE1C LTR MaLR 1 375 0 326 326 28 33 chr5 123146270 123146290 -76483860 - L2 LINE L2 -481 2832 2813 906 144 30 153 chr5 123147633 123147869 -76482281 + MER3 DNA MER1_type 1 207 -2 284 306 133 0 chr5 123147941 123148039 -76482111 + L2 LINE L2 3203 3313 0 448 318 41 6 chr5 123148402 123148572 -76481578 - MIR SINE MIR -23 239 64 181 299 58 35 chr5 123149338 123149425 -76480725 - MIR3 SINE MIR -30 178 90 515 345 6 0 chr5 123149845 123150019 -76480131 - MIR SINE MIR -5 257 83 506 279 59 63 chr5 123150990 123151329 -76478821 + L1ME4a LINE L1 5574 5875 -246 2386 65 3 43 chr5 123151576 123151900 -76478250 - AluY SINE Alu 0 311 1 2361 86 16 25 chr5 123151932 123152247 -76477903 + AluSq SINE Alu 2 313 0 369 0 0 0 chr5 123152669 123152710 -76477440 + (CA)n Simple_repeat Simple_repeat 2 42 0 342 80 0 0 chr5 123153041 123153091 -76477059 + (CAT)n Simple_repeat Simple_repeat 2 51 0 520 234 23 8 chr5 123153105 123153233 -76476917 - MIR SINE MIR -17 245 116 597 365 33 19 chr5 123153312 123153676 -76476474 + L3 LINE CR1 781 1149 -428 609 297 55 5 chr5 123153695 123153897 -76476253 - MIR SINE MIR -22 240 29 196 315 235 50 chr5 123154289 123154527 -76475623 + L3 LINE CR1 1277 1558 -19 252 200 53 53 chr5 123155259 123155334 -76474816 - Charlie8 DNA MER1_type -1 2416 2342 21 82 0 0 chr5 123155740 123155789 -76474361 + AT_rich Low_complexity Low_complexity 1 49 0 2211 199 18 7 chr5 123155809 123155934 -76474216 - L1MC3 LINE L1 0 7785 7663 1128 198 88 0 chr5 123155934 123156151 -76473999 - MER46A DNA MER2_type 0 236 1 2211 199 18 7 chr5 123156151 123156466 -76473684 - L1MC3 LINE L1 -122 7663 7340 1941 199 84 16 chr5 123156468 123156896 -76473254 - LTR32 LTR ERVL 0 471 15 2632 153 83 42 chr5 123156896 123157092 -76473058 - L1MC3 LINE L1 -443 7342 7156 2094 122 60 46 chr5 123157092 123157462 -76472688 + THE1C LTR MaLR 1 375 0 10195 124 36 42 chr5 123157462 123158224 -76471926 + THE1C-int LTR MaLR 1 766 -814 2360 85 3 3 chr5 123158224 123158530 -76471620 + AluSc SINE Alu 1 306 -3 10195 124 36 42 chr5 123158530 123159357 -76470793 + THE1C-int LTR MaLR 766 1580 0 2074 117 53 56 chr5 123159357 123159687 -76470463 + THE1C LTR MaLR 1 331 -44 1737 157 59 7 chr5 123159687 123159973 -76470177 - AluSg SINE Alu -9 301 1 2074 117 53 56 chr5 123159973 123160018 -76470132 + THE1C LTR MaLR 331 375 0 2632 153 83 42 chr5 123160018 123160370 -76469780 - L1MC3 LINE L1 -628 7157 6769 283 329 0 0 chr5 123160422 123160498 -76469652 - Charlie8 DNA MER1_type -2336 81 6 438 309 55 6 chr5 123160950 123161131 -76469019 - Charlie8 DNA MER1_type -2141 276 87 2308 109 3 0 chr5 123161605 123161916 -76468234 + AluSx SINE Alu 1 312 0 744 288 28 28 chr5 123163427 123163539 -76466611 - MIR SINE MIR 0 262 151 1547 148 80 107 chr5 123163539 123163999 -76466151 + LTR7 LTR ERV1 1 448 -2 744 288 28 28 chr5 123163999 123164136 -76466014 - MIR SINE MIR -110 152 13 228 196 78 0 chr5 123164916 123164967 -76465183 + L1ME LINE L1 5747 5801 -363 23 0 0 0 chr5 123165289 123165312 -76464838 + AT_rich Low_complexity Low_complexity 1 23 0 2353 83 3 13 chr5 123165653 123165967 -76464183 - AluSx SINE Alu -1 311 1 778 219 80 52 chr5 123166607 123166858 -76463292 + ORSL DNA AcHobo 18 275 0 180 0 0 0 chr5 123166991 123167011 -76463139 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 213 322 79 57 chr5 123167122 123167313 -76462837 - MIR SINE MIR -71 191 3 261 213 0 0 chr5 123167703 123167750 -76462400 + L2 LINE L2 3224 3270 -2 1275 232 38 85 chr5 123167775 123168323 -76461827 - MER39 LTR ERV1 0 707 1 21 0 0 0 chr5 123168387 123168408 -76461742 + AT_rich Low_complexity Low_complexity 1 21 0 220 356 22 22 chr5 123168480 123168570 -76461580 + MIR SINE MIR 74 163 -99 2224 37 7 7 chr5 123168963 123169232 -76460918 + L1PA5 LINE L1 5886 6154 0 2041 90 0 117 chr5 123169407 123169576 -76460574 + AluSg SINE Alu 1 114 -196 2479 84 3 0 chr5 123169576 123169884 -76460266 + AluSp SINE Alu 1 309 -4 2041 90 0 117 chr5 123169884 123170047 -76460103 + AluSg SINE Alu 114 294 -16 2081 119 14 0 chr5 123171753 123172046 -76458104 - AluY SINE Alu -14 297 1 1875 153 35 0 chr5 123172129 123172417 -76457733 + AluJb SINE Alu 1 298 -14 2356 85 0 3 chr5 123172700 123172994 -76457156 + AluSg SINE Alu 1 293 -17 382 296 67 21 chr5 123177011 123177341 -76452809 + L1ME4a LINE L1 5715 5931 -190 311 291 71 31 chr5 123177789 123177916 -76452234 + MIR3 SINE MIR 62 193 -15 1978 175 71 32 chr5 123177998 123178437 -76451713 - LTR2B LTR ERV1 -3 487 32 3215 151 126 30 chr5 123178762 123179404 -76450746 - MER39 LTR ERV1 -3 704 1 446 231 0 9 chr5 123179438 123179546 -76450604 - MER39 LTR ERV1 -19 688 582 1443 126 140 75 chr5 123179546 123179824 -76450326 + AluSx SINE Alu 1 296 -6 252 0 0 0 chr5 123181429 123181457 -76448693 + (T)n Simple_repeat Simple_repeat 1 28 0 2201 121 0 13 chr5 123182233 123182538 -76447612 - AluSx SINE Alu -11 301 1 1941 164 0 7 chr5 123182538 123182841 -76447309 - AluSx SINE Alu -9 303 2 2151 92 0 62 chr5 123182919 123183225 -76446925 + AluSg SINE Alu 3 289 -21 724 225 0 0 chr5 123183318 123183447 -76446703 + FLAM_C SINE Alu 2 130 -13 1201 199 31 112 chr5 123183447 123183562 -76446588 - MER34B LTR ERV1 -168 397 274 2303 104 0 0 chr5 123183562 123183861 -76446289 + AluSx SINE Alu 1 299 -13 1201 199 31 112 chr5 123183861 123183949 -76446201 - MER34B LTR ERV1 -291 274 180 2365 76 7 3 chr5 123183949 123184252 -76445898 - AluY SINE Alu -7 304 1 1201 199 31 112 chr5 123184252 123184468 -76445682 - MER34B LTR ERV1 -385 180 11 2909 86 0 30 chr5 123184469 123184842 -76445308 - THE1B LTR MaLR 0 364 3 544 123 0 0 chr5 123184874 123184947 -76445203 + AluS SINE Alu 1 73 -239 2105 132 0 0 chr5 123185041 123185336 -76444814 - AluSq SINE Alu -18 295 1 334 0 43 0 chr5 123185400 123185446 -76444704 + (TA)n Simple_repeat Simple_repeat 2 49 0 3709 49 2 0 chr5 123185451 123185898 -76444252 - L1PA5 LINE L1 -80 6074 5627 206 330 117 10 chr5 123185898 123186001 -76444149 - MIR SINE MIR -99 163 50 843 58 19 45 chr5 123186197 123186352 -76443798 + (TTTC)n Simple_repeat Simple_repeat 2 152 0 2178 92 0 7 chr5 123186354 123186637 -76443513 - AluY SINE Alu -30 281 1 427 229 0 111 chr5 123186716 123186860 -76443290 - MIR SINE MIR -64 144 17 281 26 26 0 chr5 123187112 123187150 -76443000 + (TG)n Simple_repeat Simple_repeat 1 39 0 306 282 160 5 chr5 123187504 123187653 -76442497 - L1ME4a LINE L1 -2 6119 5909 21 0 0 0 chr5 123187653 123187674 -76442476 + AT_rich Low_complexity Low_complexity 1 21 0 306 282 160 5 chr5 123187674 123187717 -76442433 - L1ME4a LINE L1 -212 5909 5874 188 318 45 0 chr5 123187778 123187844 -76442306 - MIR SINE MIR -84 178 110 389 315 41 30 chr5 123187851 123188048 -76442102 + L2 LINE L2 2157 2355 -959 570 313 63 44 chr5 123188082 123188135 -76442015 + L2 LINE L2 2615 2666 -606 2313 96 7 3 chr5 123188135 123188438 -76441712 - AluSq SINE Alu -9 304 1 570 313 63 44 chr5 123188438 123188839 -76441311 + L2 LINE L2 2666 3078 -194 394 153 0 14 chr5 123188861 123188933 -76441217 - LTR29 LTR ERV1 0 622 552 1255 117 10 0 chr5 123188954 123189159 -76440991 - MER39B LTR ERV1 -446 207 1 374 283 54 63 chr5 123189161 123189366 -76440784 + L2 LINE L2 3106 3308 -5 339 200 150 12 chr5 123189498 123189578 -76440572 + AluJ/FLAM SINE Alu 1 91 -211 180 0 0 0 chr5 123189588 123189608 -76440542 + (TAA)n Simple_repeat Simple_repeat 2 21 0 270 316 32 70 chr5 123189937 123190095 -76440055 - MIR3 SINE MIR -5 203 52 224 262 0 0 chr5 123190238 123190280 -76439870 + (CAG)n Simple_repeat Simple_repeat 3 44 0 266 265 73 79 chr5 123190388 123190554 -76439596 - MIR SINE MIR -59 149 22 243 125 0 0 chr5 123191207 123191247 -76438903 + (CA)n Simple_repeat Simple_repeat 2 41 0 234 304 22 22 chr5 123192083 123192218 -76437932 - L1M4 LINE L1 -1952 4194 4060 583 249 63 76 chr5 123192537 123192774 -76437376 + MIR SINE MIR 29 262 0 2367 75 20 0 chr5 123192897 123193192 -76436958 - AluY SINE Alu -9 302 2 192 326 80 80 chr5 123193514 123193652 -76436498 - L2 LINE L2 0 3313 3176 367 246 74 11 chr5 123193964 123194139 -76436011 + MER113 DNA MER1_type? 32 217 -304 2519 61 0 16 chr5 123194276 123194589 -76435561 - AluY SINE Alu -3 308 1 519 238 124 16 chr5 123194648 123194833 -76435317 + L2 LINE L2 3086 3290 -23 2270 104 0 0 chr5 123195078 123195375 -76434775 - AluSc SINE Alu -12 297 1 2185 128 0 0 chr5 123195813 123196110 -76434040 - AluSx SINE Alu -11 301 5 2417 59 7 0 chr5 123196175 123196463 -76433687 + AluY SINE Alu 6 295 -16 22 0 0 0 chr5 123196838 123196860 -76433290 + AT_rich Low_complexity Low_complexity 1 22 0 971 139 60 0 chr5 123197191 123197357 -76432793 + FRAM SINE Alu 1 172 -4 2272 117 3 0 chr5 123197671 123197978 -76432172 - AluSg SINE Alu -2 308 1 600 335 15 10 chr5 123198578 123198784 -76431366 - MIR SINE MIR -25 237 31 2102 102 25 0 chr5 123198924 123199207 -76430943 - AluSx SINE Alu -22 290 1 4447 156 96 41 chr5 123199252 123200225 -76429925 - L1MC2 LINE L1 -12 6332 5291 2411 86 0 10 chr5 123200225 123200538 -76429612 - AluSg SINE Alu 0 310 1 4447 156 96 41 chr5 123200538 123200627 -76429523 - L1MC2 LINE L1 -1053 5291 5208 364 297 61 0 chr5 123200852 123201000 -76429150 + MER103 DNA DNA 10 166 0 560 268 60 51 chr5 123201358 123201593 -76428557 - L2 LINE L2 0 3313 3077 974 227 14 0 chr5 123201593 123201809 -76428341 - MER58A DNA MER1_type 0 224 6 204 298 46 99 chr5 123201829 123201890 -76428260 - L2 LINE L2 -222 3091 3039 2508 66 3 0 chr5 123201890 123202191 -76427959 + AluSp SINE Alu 1 302 -11 204 298 46 99 chr5 123202191 123202260 -76427890 - L2 LINE L2 -274 3039 2968 556 124 87 43 chr5 123202307 123202497 -76427653 - L1M4 LINE L1 -748 5398 5208 2444 73 13 0 chr5 123202646 123202948 -76427202 - AluY SINE Alu -5 306 1 233 122 0 20 chr5 123202984 123203033 -76427117 + MADE1 DNA Mariner 31 78 -2 1169 329 92 16 chr5 123203034 123203679 -76426471 - L2 LINE L2 -364 2950 2257 2135 132 3 0 chr5 123203702 123204012 -76426138 + AluSq SINE Alu 1 311 -2 266 282 144 52 chr5 123204073 123204247 -76425903 + L2 LINE L2 3116 3305 -8 374 321 172 0 chr5 123204614 123204748 -76425402 - MIR3 SINE MIR -22 186 30 200 176 0 0 chr5 123205019 123205053 -76425097 + (TG)n Simple_repeat Simple_repeat 2 35 0 2178 92 7 0 chr5 123205072 123205379 -76424771 - AluSp SINE Alu 0 309 1 23 33 0 0 chr5 123205385 123205415 -76424735 + AT_rich Low_complexity Low_complexity 1 30 0 1812 134 54 0 chr5 123205530 123205806 -76424344 - AluSx SINE Alu -21 291 1 729 246 30 0 chr5 123205894 123206061 -76424089 - FAM SINE Alu -2 173 2 2028 190 40 44 chr5 123206813 123207382 -76422768 + L1ME2 LINE L1 5595 6161 -3 1913 170 0 0 chr5 123207752 123208041 -76422109 - AluJo SINE Alu -23 289 1 2368 87 0 10 chr5 123208199 123208511 -76421639 - AluY SINE Alu 0 311 3 317 346 59 7 chr5 123208541 123208677 -76421473 + L2 LINE L2 3129 3271 -1 2351 72 24 0 chr5 123209492 123209785 -76420365 - AluSp SINE Alu -12 301 2 1907 158 20 0 chr5 123210613 123210916 -76419234 - AluSg SINE Alu 0 310 2 22 0 0 0 chr5 123211073 123211095 -76419055 + AT_rich Low_complexity Low_complexity 1 22 0 196 330 80 30 chr5 123211145 123211245 -76418905 - L2 LINE L2 -4 3309 3205 218 244 0 0 chr5 123211316 123211361 -76418789 - MIR SINE MIR -72 190 146 396 222 301 3 chr5 123211445 123211625 -76418525 - MIR SINE MIR 0 262 20 185 368 42 11 chr5 123212048 123212143 -76418007 + MIR SINE MIR 44 141 -67 28 71 0 0 chr5 123212230 123212286 -76417864 + AT_rich Low_complexity Low_complexity 1 56 0 1321 164 22 53 chr5 123213648 123213966 -76416184 - L1MB7 LINE L1 0 6184 5877 2369 115 25 48 chr5 123213979 123214650 -76415500 - L1PA4 LINE L1 -1 6154 5531 297 0 0 0 chr5 123216487 123216520 -76413630 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 0 0 0 chr5 123218197 123218218 -76411932 + AT_rich Low_complexity Low_complexity 1 21 0 363 169 39 0 chr5 123218689 123218766 -76411384 + MER103 DNA DNA 13 92 -74 2348 93 3 0 chr5 123218773 123219075 -76411075 + AluSp SINE Alu 2 304 -9 1814 145 43 13 chr5 123219141 123219444 -76410706 - AluJo SINE Alu 0 312 1 275 259 45 9 chr5 123219529 123219641 -76410509 + MER117 DNA MER1_type 1 116 -81 356 0 0 0 chr5 123220207 123220250 -76409900 + 5S rRNA rRNA 1 43 -78 1792 147 3 48 chr5 123220451 123220722 -76409428 + AluJo SINE Alu 12 269 -43 216 97 0 0 chr5 123220722 123220753 -76409397 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1792 147 3 48 chr5 123220753 123220794 -76409356 + AluJo SINE Alu 269 310 -2 2351 74 17 0 chr5 123221484 123221781 -76408369 + AluY SINE Alu 1 302 -9 1737 168 10 14 chr5 123221818 123222109 -76408041 + AluJo SINE Alu 1 290 -22 644 147 0 35 chr5 123223127 123223243 -76406907 + MSTA LTR MaLR 290 401 -27 8252 50 9 0 chr5 123223258 123224215 -76405935 + LTR5 LTR ERVK 1 966 -3 1069 96 7 0 chr5 123224223 123224369 -76405781 - AluSq SINE Alu -1 312 166 2463 89 94 5 chr5 123224369 123224774 -76405376 + LTR7 LTR ERV1 1 441 -9 1045 151 6 22 chr5 123224778 123224957 -76405193 - AluSq SINE Alu -137 176 1 264 105 0 0 chr5 123224958 123224996 -76405154 + MSTA LTR MaLR 389 426 0 1295 219 57 18 chr5 123226445 123226846 -76403304 - LTR37A LTR ERV1 0 426 10 203 250 23 0 chr5 123226857 123226901 -76403249 - MIR SINE MIR -55 153 109 226 373 18 18 chr5 123227579 123227689 -76402461 - MIR SINE MIR -152 110 1 22 0 0 0 chr5 123228179 123228201 -76401949 + AT_rich Low_complexity Low_complexity 1 22 0 2339 99 3 0 chr5 123228214 123228517 -76401633 + AluSx SINE Alu 1 304 -8 430 242 20 160 chr5 123228675 123228968 -76401182 - MLT1K LTR MaLR -12 576 325 299 295 54 18 chr5 123229065 123229177 -76400973 - MLT1K LTR MaLR -438 150 35 1655 197 0 3 chr5 123229303 123229592 -76400558 + AluJo SINE Alu 3 290 -22 21 0 0 0 chr5 123229704 123229725 -76400425 + AT_rich Low_complexity Low_complexity 1 21 0 2163 131 0 0 chr5 123229731 123230029 -76400121 - AluSx SINE Alu -14 298 1 194 130 109 22 chr5 123230244 123230290 -76399860 - L2 LINE L2 0 3313 3264 284 228 118 16 chr5 123230366 123230493 -76399657 + L1ME4a LINE L1 5331 5470 -2338 417 360 0 12 chr5 123230589 123230750 -76399400 + L1ME4a LINE L1 5667 5825 -296 30 0 0 0 chr5 123231121 123231151 -76398999 + AT_rich Low_complexity Low_complexity 1 30 0 773 172 59 54 chr5 123231205 123231409 -76398741 - MER3 DNA MER1_type -4 205 1 253 327 44 0 chr5 123232265 123232378 -76397772 - LTR33A LTR ERVL -349 174 57 242 284 45 34 chr5 123232619 123232707 -76397443 + MER5A DNA MER1_type 18 106 -83 21 36 0 0 chr5 123233204 123233232 -76396918 + AT_rich Low_complexity Low_complexity 1 28 0 2253 117 0 0 chr5 123233869 123234177 -76395973 + AluSx SINE Alu 1 308 -4 2112 107 4 4 chr5 123234220 123234544 -76395606 - AluSg SINE Alu 0 324 1 199 299 52 62 chr5 123235329 123235426 -76394724 - MER5A DNA MER1_type -2 187 92 * 245 186 0 0 chr5 123235399 123235442 -76394708 + MER5A DNA MER1_type 119 161 -28 2448 77 0 3 chr5 123235624 123235934 -76394216 - AluY SINE Alu -2 309 1 429 20 0 0 chr5 123236409 123236459 -76393691 + (TAA)n Simple_repeat Simple_repeat 2 51 0 21 0 0 0 chr5 123236485 123236506 -76393644 + AT_rich Low_complexity Low_complexity 1 21 0 188 340 0 0 chr5 123236506 123236556 -76393594 + L2 LINE L2 3214 3263 -9 978 141 7 0 chr5 123236610 123236752 -76393398 - AluJb SINE Alu -165 147 5 271 278 93 25 chr5 123236848 123236997 -76393153 - MIR SINE MIR -3 205 42 670 164 69 50 chr5 123237978 123238088 -76392062 + MER5B DNA MER1_type 2 117 -61 2276 86 31 0 chr5 123238088 123238379 -76391771 - AluSc SINE Alu -9 300 1 670 164 69 50 chr5 123238379 123238427 -76391723 + MER5B DNA MER1_type 117 163 -15 294 309 59 27 chr5 123238618 123238768 -76391382 - MIR SINE MIR -66 142 39 308 308 0 33 chr5 123238832 123238923 -76391227 - L2 LINE L2 -181 3091 3004 275 310 126 0 chr5 123239100 123239187 -76390963 + MER5B DNA MER1_type 17 114 -64 1482 198 138 3 chr5 123239563 123239882 -76390268 - MLT1A1 LTR MaLR 0 365 4 769 201 103 38 chr5 123239916 123240100 -76390050 - MER77 LTR ERV1 -4 601 406 1525 240 42 11 chr5 123240503 123240958 -76389192 + L1MD2 LINE L1 897 1365 -5044 * 2506 229 76 26 chr5 123240956 123241525 -76388625 + L1MD2 LINE L1 4967 5507 -1112 1725 160 36 0 chr5 123241525 123241831 -76388319 + AluJb SINE Alu 1 316 0 2506 229 76 26 chr5 123241831 123242423 -76387727 + L1MD2 LINE L1 5507 6199 -420 2203 123 6 22 chr5 123242423 123242741 -76387409 + AluSq SINE Alu 1 313 0 2506 229 76 26 chr5 123242741 123242796 -76387354 + L1MD2 LINE L1 6199 6250 -369 370 59 0 0 chr5 123242797 123242848 -76387302 - AluSq SINE Alu -113 190 140 1597 224 18 26 chr5 123243147 123243468 -76386682 + MER58B DNA MER1_type 6 325 -2095 2471 77 6 0 chr5 123243468 123243779 -76386371 + AluSp SINE Alu 1 313 0 1597 224 18 26 chr5 123243779 123243796 -76386354 + MER58B DNA MER1_type 325 341 0 24 0 0 0 chr5 123243821 123243845 -76386305 + AT_rich Low_complexity Low_complexity 1 24 0 1755 137 53 23 chr5 123243881 123244180 -76385970 + AluSx SINE Alu 1 308 -4 2516 32 7 10 chr5 123244323 123244633 -76385517 + AluY SINE Alu 1 309 -2 2267 83 23 13 chr5 123245558 123245860 -76384290 + AluSg SINE Alu 1 305 -5 227 333 72 18 chr5 123245861 123245972 -76384178 - MIR SINE MIR -62 146 30 2237 110 10 0 chr5 123246614 123246915 -76383235 - AluSg SINE Alu -6 304 1 1893 154 82 25 chr5 123247115 123247434 -76382716 - MER1B DNA MER1_type 0 337 1 420 194 5 203 chr5 123247613 123247830 -76382320 - L2 LINE L2 0 3313 3140 1343 308 89 23 chr5 123247839 123248325 -76381825 - L2 LINE L2 -720 2594 2059 2207 111 7 0 chr5 123248325 123248622 -76381528 + AluSx SINE Alu 1 299 -13 1343 308 89 23 chr5 123248622 123248739 -76381411 - L2 LINE L2 -1255 2059 1951 2308 109 0 0 chr5 123248993 123249295 -76380855 - AluSx SINE Alu -10 302 1 21 0 0 0 chr5 123249303 123249324 -76380826 + AT_rich Low_complexity Low_complexity 1 21 0 735 286 150 45 chr5 123249952 123250564 -76379586 + L2 LINE L2 2402 3133 -180 2438 93 3 0 chr5 123250564 123250874 -76379276 - AluSp SINE Alu -2 311 1 735 286 150 45 chr5 123250874 123251062 -76379088 + L2 LINE L2 3133 3300 -13 243 61 0 0 chr5 123251062 123251095 -76379055 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 265 310 85 16 chr5 123251165 123251294 -76378856 - LTR16C LTR ERVL -1 490 353 2419 92 3 0 chr5 123252082 123252388 -76377762 - AluSg SINE Alu -3 307 1 1587 187 31 90 chr5 123252834 123253199 -76376951 - LTR9 LTR ERV1 -73 539 264 2205 108 0 20 chr5 123253199 123253505 -76376645 + AluSq SINE Alu 1 300 -13 1587 187 31 90 chr5 123253505 123253755 -76376395 - LTR9 LTR ERV1 -348 264 1 22 0 0 0 chr5 123254202 123254224 -76375926 + AT_rich Low_complexity Low_complexity 1 22 0 382 186 0 14 chr5 123254285 123254355 -76375795 + L1MEc LINE L1 35 103 -6293 627 103 198 32 chr5 123254357 123254483 -76375667 + AluY SINE Alu 165 311 0 3477 238 80 42 chr5 123254510 123255221 -76374929 + L1MEc LINE L1 92 775 -5621 2548 74 0 0 chr5 123255221 123255531 -76374619 + AluSq SINE Alu 1 310 -3 3477 238 80 42 chr5 123255531 123255662 -76374488 + L1MEc LINE L1 775 900 -5496 2028 115 14 0 chr5 123255662 123255980 -76374170 + AluSg SINE Alu 1 322 0 3477 238 80 42 chr5 123255980 123256230 -76373920 + L1MEc LINE L1 900 1227 -5169 862 268 37 89 chr5 123256235 123256506 -76373644 + LTR41 LTR ERVL 214 461 -312 1728 181 3 19 chr5 123256506 123256820 -76373330 - AluJo SINE Alu -3 309 1 862 268 37 89 chr5 123256820 123256928 -76373222 + LTR41 LTR ERVL 461 573 -200 1357 186 36 36 chr5 123256966 123257272 -76372878 - AluSx SINE Alu -6 306 1 1020 262 82 8 chr5 123257339 123257706 -76372444 + L1M4 LINE L1 3619 4012 -2134 197 65 32 0 chr5 123257706 123257737 -76372413 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 535 259 80 61 chr5 123257837 123258099 -76372051 + L1M4 LINE L1 4019 4285 -1861 799 212 34 0 chr5 123258102 123258248 -76371902 + FRAM SINE Alu 1 151 -25 1914 208 27 0 chr5 123258251 123258664 -76371486 + L1M4 LINE L1 4263 4686 -1460 826 188 6 12 chr5 123258727 123258887 -76371263 + L1MA10 LINE L1 6175 6333 -1 245 311 0 0 chr5 123259345 123259419 -76370731 + CT-rich Low_complexity Low_complexity 2 75 0 3519 109 55 6 chr5 123259420 123259959 -76370191 + LTR49 LTR ERV1 1 555 -40 362 96 39 0 chr5 123260153 123260205 -76369945 + LTR48B LTR ERV1 1 54 -590 2587 144 31 27 chr5 123260206 123260425 -76369725 - MER41A LTR ERV1 -40 595 378 1767 155 0 20 chr5 123260425 123260721 -76369429 - AluSq SINE Alu -21 292 3 2587 144 31 27 chr5 123260721 123261092 -76369058 - MER41A LTR ERV1 -257 378 1 1669 247 87 15 chr5 123261092 123261623 -76368527 + LTR48B LTR ERV1 46 615 -29 22 0 0 0 chr5 123264328 123264350 -76365800 + AT_rich Low_complexity Low_complexity 1 22 0 893 163 0 14 chr5 123264358 123264499 -76365651 - FAM SINE Alu -27 158 20 2384 93 0 13 chr5 123264512 123264854 -76365296 - AluSc SINE Alu 0 338 1 335 212 12 0 chr5 123264879 123264964 -76365186 + CT-rich Low_complexity Low_complexity 4 89 0 471 141 0 0 chr5 123264992 123265070 -76365080 + (CA)n Simple_repeat Simple_repeat 2 79 0 187 363 67 34 chr5 123265761 123265940 -76364210 - L3b LINE CR1 -74 1509 1325 3462 155 49 5 chr5 123267678 123268245 -76361905 + LTR49 LTR ERV1 1 592 -3 230 229 83 0 chr5 123268444 123268492 -76361658 + L2 LINE L2 3262 3313 0 1856 121 57 14 chr5 123269220 123269501 -76360649 - AluSc SINE Alu -16 293 1 2895 50 3 8 chr5 123269573 123269935 -76360215 - LTR7 LTR ERV1 -2 448 89 1324 75 6 19 chr5 123269942 123270226 -76359924 - LTR7 LTR ERV1 -268 182 1 305 175 9 114 chr5 123270343 123270457 -76359693 - Charlie5 DNA MER1_type 0 2624 2523 244 150 50 46 chr5 123270462 123270478 -76359672 - L1MD1 LINE L1 -3 7763 7749 1146 157 5 0 chr5 123270478 123270669 -76359481 - L1MA5A LINE L1 -6 6291 6100 244 150 50 46 chr5 123270669 123270823 -76359327 - L1MD1 LINE L1 -17 7749 7597 1777 185 3 0 chr5 123270823 123271115 -76359035 - AluJb SINE Alu -15 297 5 244 150 50 46 chr5 123271115 123271324 -76358826 - L1MD1 LINE L1 -169 7597 6125 1755 183 10 86 chr5 123271326 123271430 -76358720 + MLT1A1 LTR MaLR 2 112 -253 2317 116 8 25 chr5 123271430 123271791 -76358359 - THE1A LTR MaLR 0 355 1 1755 183 10 86 chr5 123271791 123272080 -76358070 + MLT1A1 LTR MaLR 112 365 0 5920 209 98 60 chr5 123272080 123273639 -76356511 + MLT1A1-int LTR MaLR 1 1619 -116 1019 155 110 64 chr5 123273627 123273850 -76356300 - L1MC3 LINE L1 -519 7266 7028 * 2302 94 0 3 chr5 123273850 123274149 -76356001 + AluSg SINE Alu 2 299 -11 1019 155 110 64 chr5 123274149 123274189 -76355961 - L1MC3 LINE L1 -757 7028 6991 9463 194 48 40 chr5 123274189 123274700 -76355450 - Charlie5 DNA MER1_type -88 2536 2031 1262 206 70 11 chr5 123274700 123274829 -76355321 + AluJo SINE Alu 1 121 -191 303 28 0 0 chr5 123274829 123274865 -76355285 + (ATAAG)n Simple_repeat Simple_repeat 3 38 0 1262 206 70 11 chr5 123274865 123275007 -76355143 + AluJo SINE Alu 121 288 -24 9463 194 48 40 chr5 123275007 123275831 -76354319 - Charlie5 DNA MER1_type -593 2031 1215 2243 85 10 7 chr5 123275831 123276136 -76354014 - AluSg1 SINE Alu -3 306 1 9463 194 48 40 chr5 123276136 123277314 -76352836 - Charlie5 DNA MER1_type -1409 1215 1 2317 82 0 0 chr5 123277387 123277713 -76352437 - AluSq SINE Alu 0 326 1 1063 171 0 11 chr5 123278064 123278240 -76351910 - FRAM SINE Alu -2 174 1 425 302 144 15 chr5 123278245 123278447 -76351703 + L3 LINE CR1 1346 1573 -4 216 306 0 18 chr5 123279594 123279623 -76350527 + GA-rich Low_complexity Low_complexity 2 30 -80 2353 92 3 0 chr5 123279623 123279928 -76350222 + AluSp SINE Alu 1 306 -7 216 306 0 18 chr5 123279928 123280009 -76350141 + GA-rich Low_complexity Low_complexity 30 110 0 1629 162 9 94 chr5 123280740 123281068 -76349082 - AluJb SINE Alu -12 300 1 309 308 86 8 chr5 123281179 123281296 -76348854 - L2 LINE L2 -5 3308 3183 282 348 116 0 chr5 123281573 123281728 -76348422 + MIR SINE MIR 34 206 -56 22 35 0 0 chr5 123282056 123282085 -76348065 + AT_rich Low_complexity Low_complexity 1 29 0 391 297 16 31 chr5 123282156 123282284 -76347866 - MLT1J1 LTR MaLR 0 549 424 466 277 34 34 chr5 123282443 123282649 -76347501 - MLT1H LTR MaLR -343 206 1 355 279 88 49 chr5 123283695 123283921 -76346229 + L2 LINE L2 3038 3272 -41 604 55 0 22 chr5 123283962 123284053 -76346097 + (GAAA)n Simple_repeat Simple_repeat 1 89 0 222 37 0 0 chr5 123284295 123284322 -76345828 + (GA)n Simple_repeat Simple_repeat 2 28 0 326 286 136 34 chr5 123284441 123284647 -76345503 - MIR SINE MIR -14 248 22 363 275 48 153 chr5 123284833 123285030 -76345120 - L2 LINE L2 0 3313 3097 2155 131 0 13 chr5 123285030 123285343 -76344807 + AluSx SINE Alu 2 310 -2 363 275 48 153 chr5 123285343 123285668 -76344482 - L2 LINE L2 -216 3097 2846 413 274 17 34 chr5 123286085 123286202 -76343948 - MIR SINE MIR -123 139 25 2188 111 0 0 chr5 123287126 123287415 -76342735 + AluSx SINE Alu 3 291 -21 826 270 98 39 chr5 123287430 123287789 -76342361 - MLT1J1 LTR MaLR -52 394 15 500 226 55 111 chr5 123288056 123288180 -76341970 - MER5A DNA MER1_type 0 189 79 1359 165 130 35 chr5 123288180 123288465 -76341685 - AluJb SINE Alu 0 312 1 500 226 55 111 chr5 123288465 123288539 -76341611 - MER5A DNA MER1_type -110 79 2 278 264 76 83 chr5 123289573 123289717 -76340433 - MIR3 SINE MIR -47 161 19 252 0 0 0 chr5 123289862 123289890 -76340260 + (TG)n Simple_repeat Simple_repeat 2 29 0 939 90 14 0 chr5 123290719 123290863 -76339287 - Tigger5 DNA MER2_type -116 2207 2062 229 139 0 0 chr5 123290861 123290897 -76339253 - Tigger5 DNA MER2_type -2261 62 27 * 2298 94 3 0 chr5 123290915 123291214 -76338936 - AluSx SINE Alu -12 300 1 598 288 11 47 chr5 123291465 123291656 -76338494 - MER5A DNA MER1_type -5 184 1 823 255 16 0 chr5 123292437 123292621 -76337529 + MER58A DNA MER1_type 12 198 -26 186 203 0 87 chr5 123292632 123292701 -76337449 - L2 LINE L2 -3161 153 91 1689 183 0 17 chr5 123292988 123293289 -76336861 - AluJo SINE Alu -16 296 1 228 216 54 14 chr5 123293318 123293392 -76336758 + MER103 DNA DNA 17 93 -73 2108 113 0 56 chr5 123293925 123294245 -76335905 + AluSx SINE Alu 5 306 -6 2257 118 0 0 chr5 123294363 123294659 -76335491 + AluSc SINE Alu 1 296 -13 411 253 180 39 chr5 123295619 123295797 -76334353 - MER63A DNA MER1_type -7 203 1 1187 173 33 0 chr5 123296022 123296236 -76333914 + AluJo SINE Alu 4 224 -88 721 169 41 132 chr5 123296236 123296441 -76333709 - L1MB7 LINE L1 -129 6055 5833 2352 84 0 3 chr5 123296441 123296737 -76333413 - AluSq SINE Alu -18 295 1 2133 136 0 3 chr5 123296738 123297040 -76333110 - AluSx SINE Alu -11 301 1 721 169 41 132 chr5 123297040 123297098 -76333052 - L1MB7 LINE L1 -350 5834 5814 194 0 0 37 chr5 123297123 123297150 -76333000 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 1740 156 29 3 chr5 123297155 123297463 -76332687 - L1MC1 LINE L1 -13 6320 6005 866 195 38 63 chr5 123297798 123298111 -76332039 - MER39 LTR ERV1 -9 666 395 255 247 31 31 chr5 123298236 123298333 -76331817 - LTR48B LTR ERV1 -542 102 6 2691 162 12 2 chr5 123298339 123298832 -76331318 - L1MC1 LINE L1 -325 6008 5511 1047 202 70 30 chr5 123298893 123299299 -76330851 - L1MB7 LINE L1 -575 5599 5180 222 62 0 0 chr5 123299302 123299334 -76330816 + (TTG)n Simple_repeat Simple_repeat 2 33 0 485 167 0 24 chr5 123299352 123299436 -76330714 - FRAM SINE Alu -55 121 40 472 268 210 29 chr5 123299436 123299708 -76330442 - L2 LINE L2 -900 2414 2094 206 219 0 0 chr5 123300126 123300167 -76329983 + (TG)n Simple_repeat Simple_repeat 1 41 0 698 288 26 16 chr5 123301200 123301391 -76328759 + MIR SINE MIR 49 241 -21 1282 180 4 44 chr5 123301622 123301901 -76328249 - AluJo SINE Alu 0 311 43 181 318 30 0 chr5 123302015 123302081 -76328069 + MIR SINE MIR 85 152 -110 607 297 94 48 chr5 123303595 123303712 -76326438 + L1M4 LINE L1 3048 3158 -2988 2182 121 0 20 chr5 123303712 123304017 -76326133 + AluSp SINE Alu 1 299 -14 607 297 94 48 chr5 123304017 123304380 -76325770 + L1M4 LINE L1 3158 3550 -2596 244 241 0 0 chr5 123304430 123304488 -76325662 + T-rich Low_complexity Low_complexity 1 58 0 2397 75 0 3 chr5 123304864 123305171 -76324979 - AluY SINE Alu -5 306 1 308 263 73 17 chr5 123305509 123305688 -76324462 + L1M4 LINE L1 3876 4064 -2082 4843 203 67 36 chr5 123305947 123307191 -76322959 + Charlie1a DNA MER1_type 5 1298 -1463 2338 104 0 0 chr5 123307191 123307500 -76322650 + AluSq SINE Alu 1 309 -4 4843 203 67 36 chr5 123307500 123307662 -76322488 + Charlie1a DNA MER1_type 1298 1454 -1 13126 134 12 75 chr5 123307705 123309495 -76320655 + Tigger1 DNA MER2_type 1 1580 -838 2297 105 6 0 chr5 123309495 123309829 -76320321 - L1PA13 LINE L1 -4 6159 5824 13126 134 12 75 chr5 123309829 123310619 -76319531 + Tigger1 DNA MER2_type 1580 2418 0 1025 188 10 5 chr5 123311020 123311227 -76318923 - MER2 DNA MER2_type -134 211 4 233 290 0 0 chr5 123312610 123312672 -76317478 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 21 0 0 0 chr5 123312763 123312784 -76317366 + AT_rich Low_complexity Low_complexity 1 21 0 277 226 28 38 chr5 123313763 123313869 -76316281 - LTR48B LTR ERV1 -538 106 2 237 33 0 0 chr5 123314981 123315011 -76315139 + (CA)n Simple_repeat Simple_repeat 1 30 0 2407 89 0 3 chr5 123315238 123315551 -76314599 - AluSp SINE Alu -1 312 1 224 254 28 14 chr5 123315572 123315643 -76314507 + (TTCA)n Simple_repeat Simple_repeat 3 74 0 1799 206 105 42 chr5 123317150 123317644 -76312506 + MER68 LTR ERV1 1 525 -37 186 43 0 0 chr5 123318026 123318049 -76312101 + (A)n Simple_repeat Simple_repeat 1 23 0 516 275 50 16 chr5 123318263 123318445 -76311705 - MIR SINE MIR 0 262 75 568 295 36 40 chr5 123318660 123318911 -76311239 + MIR SINE MIR 13 262 0 1880 177 0 13 chr5 123319334 123319639 -76310511 - AluJo SINE Alu -11 301 1 1621 169 20 34 chr5 123320314 123320446 -76309704 + AluJb SINE Alu 1 133 -179 234 81 0 0 chr5 123320446 123320483 -76309667 + (CATA)n Simple_repeat Simple_repeat 2 38 0 1621 169 20 34 chr5 123320483 123320645 -76309505 + AluJb SINE Alu 133 291 -21 238 176 27 40 chr5 123320736 123320810 -76309340 + MER113 DNA MER1_type? 1 73 -448 253 91 23 0 chr5 123320954 123320998 -76309152 + MER113 DNA MER1_type? 44 88 -433 1950 125 6 58 chr5 123322853 123323180 -76306970 - AluSx SINE Alu -2 310 1 676 248 74 63 chr5 123324004 123324355 -76305795 + MLT1C LTR MaLR 113 467 0 270 0 0 0 chr5 123324538 123324545 -76305605 + (TA)n Simple_repeat Simple_repeat 1 37 0 270 0 0 0 chr5 123324545 123324575 -76305575 + (TA)n Simple_repeat Simple_repeat 2 31 0 429 145 40 0 chr5 123324693 123324769 -76305381 + MADE1 DNA Mariner 1 79 -1 249 33 0 0 chr5 123325047 123325077 -76305073 + (T)n Simple_repeat Simple_repeat 1 30 0 24 0 0 0 chr5 123325922 123325946 -76304204 + AT_rich Low_complexity Low_complexity 1 24 0 495 233 70 8 chr5 123326077 123326206 -76303944 - L2 LINE L2 -6 3307 3171 656 177 48 0 chr5 123326935 123327059 -76303091 - MER45A DNA AcHobo 0 178 49 31 44 0 0 chr5 123327275 123327320 -76302830 + AT_rich Low_complexity Low_complexity 1 45 0 710 258 42 14 chr5 123327919 123328136 -76302014 + MER58A DNA MER1_type 1 223 -1 2387 206 89 55 chr5 123329210 123329952 -76300198 - L1MD2 LINE L1 -229 6130 5364 848 154 167 27 chr5 123329955 123330176 -76299974 + MER44D DNA MER2_type 1 522 -87 1467 226 18 9 chr5 123330180 123330517 -76299633 - MER2 DNA MER2_type 0 344 5 2258 239 101 6 chr5 123330627 123331338 -76298812 + L1ME1 LINE L1 5378 6156 -10 235 272 16 48 chr5 123331378 123331503 -76298647 - HAL1b LINE L1 -900 448 328 787 254 172 65 chr5 123334921 123335322 -76294828 - L3 LINE CR1 -7 1570 1127 376 297 85 8 chr5 123335380 123335498 -76294652 - MER5B DNA MER1_type -1 177 51 752 291 65 4 chr5 123336834 123337109 -76293041 - LTR16C LTR ERVL 0 491 200 217 326 58 0 chr5 123337430 123337516 -76292634 - L3 LINE CR1 -786 791 701 652 249 92 107 chr5 123337689 123338252 -76291898 + MLT1H1 LTR MaLR 1 555 0 259 223 149 21 chr5 123338665 123338759 -76291391 - L2 LINE L2 0 3313 3208 3086 162 25 0 chr5 123338906 123339418 -76290732 - LTR45 LTR ERV1 0 525 1 22 0 0 0 chr5 123339511 123339533 -76290617 + AT_rich Low_complexity Low_complexity 1 22 0 518 161 88 143 chr5 123339540 123339653 -76290497 - MIR SINE MIR -10 252 134 432 0 0 0 chr5 123339653 123339701 -76290449 + (TA)n Simple_repeat Simple_repeat 2 49 0 2202 128 0 0 chr5 123339701 123340005 -76290145 - AluSg SINE Alu -6 304 1 518 161 88 143 chr5 123340005 123340107 -76290043 - MIR SINE MIR -126 136 48 464 333 77 0 chr5 123340994 123341189 -76288961 - MIR SINE MIR 0 262 53 23 0 0 0 chr5 123341605 123341628 -76288522 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 123342091 123342112 -76288038 + AT_rich Low_complexity Low_complexity 1 21 0 400 305 0 25 chr5 123342298 123342416 -76287734 - MER5B DNA MER1_type -63 115 1 471 324 92 0 chr5 123342540 123342747 -76287403 + MIR SINE MIR 31 256 -6 279 0 0 0 chr5 123342809 123342840 -76287310 + (CA)n Simple_repeat Simple_repeat 2 32 0 374 247 100 27 chr5 123343244 123343394 -76286756 - MIR3 SINE MIR -27 181 21 301 248 231 8 chr5 123343427 123343544 -76286606 - MER5A DNA MER1_type -2 187 45 213 282 28 0 chr5 123344032 123344103 -76286047 + (TTA)n Simple_repeat Simple_repeat 1 73 0 2218 105 0 10 chr5 123347127 123347423 -76282727 - AluSx SINE Alu -19 293 1 2900 58 0 21 chr5 123347709 123348091 -76282059 - LTR7 LTR ERV1 -2 448 75 1387 50 6 6 chr5 123348077 123348259 -76281891 - LTR7 LTR ERV1 -268 182 1 * 264 302 56 36 chr5 123348287 123348539 -76281611 - L1ME LINE L1 -354 5767 5511 606 325 112 14 chr5 123348643 123349000 -76281150 - L2 LINE L2 0 3313 2922 2410 152 23 35 chr5 123349001 123349144 -76281006 + L1MB5 LINE L1 5701 5844 -330 1304 162 117 66 chr5 123349144 123349570 -76280580 + LTR7 LTR ERV1 1 448 -2 2410 152 23 35 chr5 123349570 123349906 -76280244 + L1MB5 LINE L1 5844 6174 0 1521 237 79 53 chr5 123350147 123350717 -76279433 - L1MCc LINE L1 -5817 606 22 239 314 42 38 chr5 123350746 123351010 -76279140 - L1ME LINE L1 -1301 4845 4581 1088 171 52 4 chr5 123351224 123351475 -76278675 - L1MA1 LINE L1 0 6302 6040 310 299 31 10 chr5 123351552 123351649 -76278501 + MIR SINE MIR 108 206 -56 2194 47 0 40 chr5 123351656 123351932 -76278218 + AluY SINE Alu 1 265 -46 197 335 176 29 chr5 123352208 123352453 -76277697 + L2 LINE L2 1994 2274 -1040 9655 35 1 1 chr5 123353162 123354344 -76275806 - L1P LINE L1 -3629 2517 1336 26 0 0 0 chr5 123354823 123354849 -76275301 + AT_rich Low_complexity Low_complexity 1 26 0 910 345 50 9 chr5 123355449 123355904 -76274246 + HERV16 LTR ERVL 983 1456 -3540 207 154 15 62 chr5 123356031 123356096 -76274054 + A-rich Low_complexity Low_complexity 4 65 0 321 297 0 0 chr5 123357302 123357376 -76272774 + MER58B DNA MER1_type 219 292 -49 225 0 0 0 chr5 123357469 123357494 -76272656 + (T)n Simple_repeat Simple_repeat 1 25 0 354 134 0 0 chr5 123357781 123357848 -76272302 + (CA)n Simple_repeat Simple_repeat 1 67 0 23 33 0 0 chr5 123358481 123358511 -76271639 + AT_rich Low_complexity Low_complexity 1 30 0 187 330 117 19 chr5 123359213 123359316 -76270834 - L2 LINE L2 -2 3311 3199 660 283 82 12 chr5 123359351 123359595 -76270555 + MIR SINE MIR 2 262 0 24 0 0 0 chr5 123360099 123360123 -76270027 + AT_rich Low_complexity Low_complexity 1 24 0 489 348 83 38 chr5 123360565 123361034 -76269116 + MLT1K LTR MaLR 13 502 -86 364 308 33 0 chr5 123361205 123361325 -76268825 + MER110A LTR ERV1 303 426 -42 6846 76 1 3 chr5 123361681 123362997 -76267153 - L1P2 LINE L1 -406 5748 4436 993 196 25 10 chr5 123364469 123364668 -76265482 + MLT1C LTR MaLR 34 235 -232 339 233 44 0 chr5 123365550 123365640 -76264510 + MLT1J1 LTR MaLR 54 147 -299 343 310 70 23 chr5 123365735 123365906 -76264244 + MLT1J2 LTR MaLR 272 450 0 189 266 31 86 chr5 123368109 123368237 -76261913 + MIR SINE MIR 22 142 -120 7492 32 14 0 chr5 123369552 123370583 -76259567 - L1PA3 LINE L1 0 6155 5121 2658 154 34 105 chr5 123370685 123371303 -76258847 + MER54B LTR ERVL 220 793 0 331 299 23 61 chr5 123371328 123371444 -76258706 - HERV16 LTR ERVL -2933 2063 1957 1544 202 51 14 chr5 123371444 123371796 -76258354 + MLT1A1 LTR MaLR 1 365 0 331 299 23 61 chr5 123371796 123371893 -76258257 - HERV16 LTR ERVL -3039 1957 1858 388 190 20 60 chr5 123372013 123372113 -76258037 - MER66-int LTR ERV1 -1280 5396 5301 369 0 0 0 chr5 123372232 123372273 -76257877 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1922 152 10 3 chr5 123372338 123372648 -76257502 + AluSq SINE Alu 1 312 -1 325 298 78 47 chr5 123373161 123373352 -76256798 - HAL1b LINE L1 -1063 285 89 324 83 0 0 chr5 123374761 123374809 -76255341 + (CA)n Simple_repeat Simple_repeat 1 48 0 221 236 18 0 chr5 123375835 123375890 -76254260 + GA-rich Low_complexity Low_complexity 6 61 0 1078 228 58 81 chr5 123376546 123377015 -76253135 - MER39 LTR ERV1 0 707 250 790 219 51 0 chr5 123377351 123377529 -76252621 - MER5A DNA MER1_type -2 187 1 2256 66 30 7 chr5 123377836 123378139 -76252011 - AluY SINE Alu -1 310 1 216 0 0 0 chr5 123378548 123378572 -76251578 + (CAAT)n Simple_repeat Simple_repeat 3 26 0 432 216 12 99 chr5 123378650 123378680 -76251470 - L1MA10 LINE L1 -1 6333 6304 374 254 52 52 chr5 123378680 123378873 -76251277 - L1ME1 LINE L1 0 6166 5974 334 231 11 33 chr5 123378886 123378977 -76251173 + L1ME1 LINE L1 5896 5984 -180 233 308 110 15 chr5 123378969 123379304 -76250846 + L1MC4 LINE L1 4096 4462 -1684 * 304 257 18 37 chr5 123379323 123379432 -76250718 + L1MC4 LINE L1 4552 4658 -1488 307 264 88 34 chr5 123379587 123379735 -76250415 - MLT1J1 LTR MaLR -2 444 289 2198 120 3 0 chr5 123380954 123381263 -76248887 - AluSp SINE Alu -3 310 1 378 0 0 0 chr5 123381328 123381370 -76248780 + (TA)n Simple_repeat Simple_repeat 1 42 0 312 291 120 17 chr5 123381409 123381643 -76248507 + L1MC4 LINE L1 5671 5928 -1880 22 0 0 0 chr5 123381821 123381843 -76248307 + AT_rich Low_complexity Low_complexity 1 22 0 252 208 0 0 chr5 123383775 123383823 -76246327 - MER2 DNA MER2_type 0 345 298 485 85 0 194 chr5 123383908 123383984 -76246166 - MER2 DNA MER2_type -146 199 156 1488 196 26 45 chr5 123383984 123384295 -76245855 - AluJo SINE Alu -7 305 1 485 85 0 194 chr5 123384295 123384347 -76245803 - MER2 DNA MER2_type -189 156 96 23 0 0 0 chr5 123384439 123384462 -76245688 + AT_rich Low_complexity Low_complexity 1 23 0 255 207 35 0 chr5 123384492 123384550 -76245600 - MER2 DNA MER2_type -285 60 1 617 108 0 0 chr5 123386210 123386293 -76243857 - AluS SINE Alu -228 84 2 406 357 11 22 chr5 123386297 123386482 -76243668 - MER5A DNA MER1_type 0 189 7 269 272 0 22 chr5 123386589 123386681 -76243469 - L1MC4 LINE L1 -1339 6703 6614 252 229 73 37 chr5 123386591 123386700 -76243450 + L1MC4 LINE L1 6614 6726 -1316 * 3442 183 41 3 chr5 123388465 123389169 -76240981 - L1MD1 LINE L1 0 6242 5512 2449 232 152 41 chr5 123389169 123389682 -76240468 - L1MDa LINE L1 -5675 865 238 2583 95 5 22 chr5 123389682 123390052 -76240098 + THE1B LTR MaLR 1 364 0 2449 232 152 41 chr5 123390052 123390301 -76239849 - L1MDa LINE L1 -6302 238 18 379 325 50 0 chr5 123390372 123390492 -76239658 - L2 LINE L2 0 3272 3147 183 80 0 0 chr5 123390513 123390538 -76239612 + (CAAAC)n Simple_repeat Simple_repeat 4 28 0 299 222 0 14 chr5 123392451 123392523 -76237627 - MLT1J1 LTR MaLR -21 425 355 551 261 0 2 chr5 123392650 123392784 -76237366 - MLT1J1 LTR MaLR -226 183 51 21 0 0 0 chr5 123393897 123393918 -76236232 + AT_rich Low_complexity Low_complexity 1 21 0 1620 170 122 24 chr5 123393980 123394356 -76235794 - L1MB5 LINE L1 0 6174 5762 217 305 0 0 chr5 123394477 123394536 -76235614 + GA-rich Low_complexity Low_complexity 2 60 0 1411 276 30 56 chr5 123394648 123395274 -76234876 + L1MEc LINE L1 207 816 -5580 636 323 67 57 chr5 123395278 123395342 -76234808 - L1MEc LINE L1 -4997 1724 1662 2325 97 0 3 chr5 123395342 123395650 -76234500 - AluY SINE Alu -4 307 1 636 323 67 57 chr5 123395650 123396880 -76233270 - L1MEc LINE L1 -5059 1662 417 561 316 115 36 chr5 123396950 123397314 -76232836 + L2 LINE L2 2911 3303 -10 2264 102 0 19 chr5 123397314 123397628 -76232522 + AluSq SINE Alu 5 312 -1 23 78 0 0 chr5 123397870 123397921 -76232229 + AT_rich Low_complexity Low_complexity 1 51 0 606 168 16 24 chr5 123399846 123399971 -76230179 - L1MEc LINE L1 -6399 141 18 341 333 50 0 chr5 123400043 123400163 -76229987 - L2 LINE L2 0 3272 3147 332 301 42 42 chr5 123401243 123401386 -76228764 - L2 LINE L2 -243 3070 2928 905 293 73 50 chr5 123401609 123402046 -76228104 + L2 LINE L2 2867 3313 0 269 314 85 11 chr5 123403354 123403542 -76226608 - MLT1G1 LTR MaLR 0 567 366 565 289 90 33 chr5 123403602 123403903 -76226247 - MLT1G1 LTR MaLR -277 318 1 243 234 0 0 chr5 123404108 123404155 -76225995 - L2 LINE L2 -4 3309 3263 1295 127 96 45 chr5 123404970 123405261 -76224889 + THE1C LTR MaLR 1 306 -69 584 274 13 0 chr5 123407431 123407588 -76222562 - MLT1L LTR MaLR -2 613 455 562 288 52 110 chr5 123408066 123408510 -76221640 - MLT1K LTR MaLR -47 541 124 183 42 0 0 chr5 123408541 123408565 -76221585 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 1464 294 141 21 chr5 123409891 123410913 -76219237 - L2 LINE L2 -4 3309 2111 427 215 38 0 chr5 123412376 123412455 -76217695 + MER7A DNA MER2_type 1 80 -266 26 30 0 0 chr5 123412458 123412491 -76217659 + AT_rich Low_complexity Low_complexity 1 33 0 1931 129 52 0 chr5 123412712 123412998 -76217152 + AluSg SINE Alu 3 303 -7 1260 150 133 0 chr5 123413338 123413571 -76216579 + MER7A DNA MER2_type 74 337 -9 192 135 0 0 chr5 123414490 123414527 -76215623 + (GA)n Simple_repeat Simple_repeat 2 38 0 264 122 0 0 chr5 123416267 123416308 -76213842 + (TC)n Simple_repeat Simple_repeat 2 42 0 369 58 0 0 chr5 123416311 123416363 -76213787 + (TG)n Simple_repeat Simple_repeat 2 53 0 3323 149 20 6 chr5 123417107 123417644 -76212506 + Tigger3b DNA MER2_type 1 545 -686 423 279 61 20 chr5 123418264 123418411 -76211739 - MIR SINE MIR -57 205 53 1501 288 55 38 chr5 123418564 123419141 -76211009 - MLT1K LTR MaLR 0 588 2 477 171 0 0 chr5 123419386 123419474 -76210676 + (TG)n Simple_repeat Simple_repeat 1 88 0 216 0 0 0 chr5 123419749 123419773 -76210377 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 1941 124 47 7 chr5 123420167 123420466 -76209684 - AluSq SINE Alu 0 313 3 6206 54 20 35 chr5 123420617 123421462 -76208688 - L1PA7 LINE L1 0 6154 5321 2205 107 7 0 chr5 123421462 123421753 -76208397 - AluSq SINE Alu -12 301 9 6206 54 20 35 chr5 123421753 123421775 -76208375 - L1PA7 LINE L1 -833 5321 5300 2927 71 11 47 chr5 123421774 123422225 -76207925 + L1PA7 LINE L1 4869 5303 -843 * 27 62 0 0 chr5 123422313 123422361 -76207789 + AT_rich Low_complexity Low_complexity 1 48 0 1805 142 67 0 chr5 123422579 123422861 -76207289 + AluSx SINE Alu 1 301 -11 228 193 0 84 chr5 123422914 123423033 -76207117 + T-rich Low_complexity Low_complexity 5 113 0 278 240 35 29 chr5 123423638 123423809 -76206341 + (TATAA)n Simple_repeat Simple_repeat 1 172 0 228 198 43 9 chr5 123423810 123423926 -76206224 + (TA)n Simple_repeat Simple_repeat 1 120 0 1672 195 0 7 chr5 123423926 123424213 -76205937 - AluJo SINE Alu -26 286 2 25 0 0 0 chr5 123424825 123424850 -76205300 + AT_rich Low_complexity Low_complexity 1 25 0 284 269 132 22 chr5 123425947 123426129 -76204021 - MLT1L LTR MaLR -296 319 118 2397 87 3 0 chr5 123426375 123426685 -76203465 - AluY SINE Alu 0 311 1 261 33 0 0 chr5 123427588 123427618 -76202532 + U6 snRNA snRNA 1 30 -77 291 297 34 47 chr5 123427748 123427896 -76202254 + L2 LINE L2 3080 3225 -88 27 29 0 0 chr5 123428102 123428136 -76202014 + AT_rich Low_complexity Low_complexity 1 34 0 5123 76 12 1 chr5 123428210 123428893 -76201257 + L1PA10 LINE L1 5479 6168 0 906 261 48 67 chr5 123428977 123429568 -76200582 - L2 LINE L2 -3 3310 2742 1795 171 7 0 chr5 123429880 123430172 -76199978 - AluJo SINE Alu -18 294 1 257 306 83 0 chr5 123431320 123431392 -76198758 + MIR SINE MIR 62 139 -69 186 103 0 0 chr5 123431392 123431421 -76198729 + (CAAAAA)n Simple_repeat Simple_repeat 1 29 0 1156 45 0 0 chr5 123432060 123432192 -76197958 + AluY SINE Alu 1 132 -179 1897 60 0 4 chr5 123432197 123432429 -76197721 + AluY SINE Alu 4 234 -77 1509 58 5 0 chr5 123432429 123432618 -76197532 + AluY SINE Alu 121 311 0 541 310 122 13 chr5 123432851 123433154 -76196996 + MLT1J LTR MaLR 1 336 -175 313 285 19 13 chr5 123433781 123433939 -76196211 - L1MC4a LINE L1 -1897 5911 5753 317 363 21 29 chr5 123434059 123434299 -76195851 - L1ME3A LINE L1 -90 6080 5843 21 0 0 0 chr5 123434331 123434352 -76195798 + AT_rich Low_complexity Low_complexity 1 21 0 378 0 0 0 chr5 123434396 123434438 -76195712 + (TC)n Simple_repeat Simple_repeat 2 43 0 315 122 0 0 chr5 123434438 123434487 -76195663 + (TA)n Simple_repeat Simple_repeat 1 49 0 269 263 95 0 chr5 123434492 123434587 -76195563 - MIR SINE MIR -59 203 100 314 85 21 0 chr5 123434587 123434634 -76195516 - U5 snRNA snRNA -68 48 1 227 216 118 0 chr5 123434634 123434685 -76195465 - MIR SINE MIR -150 112 56 208 182 0 23 chr5 123435180 123435224 -76194926 + (TATATG)n Simple_repeat Simple_repeat 4 46 0 300 242 137 16 chr5 123436525 123436649 -76193501 + MIR SINE MIR 123 261 -1 583 206 30 8 chr5 123436678 123436809 -76193341 + MER94 DNA DNA 1 134 0 207 316 31 21 chr5 123437055 123437152 -76192998 - MIR SINE MIR -36 172 68 334 336 69 0 chr5 123437613 123437744 -76192406 - MIR SINE MIR 0 262 123 704 250 78 6 chr5 123438202 123438382 -76191768 - MIR SINE MIR -51 211 19 2273 95 18 0 chr5 123438547 123438873 -76191277 + L1PA8 LINE L1 5840 6171 -1 2868 222 29 46 chr5 123439615 123439849 -76190301 - L1ME1 LINE L1 -5 6161 5925 919 224 88 10 chr5 123439849 123440054 -76190096 + MER58A DNA MER1_type 1 221 -3 2868 222 29 46 chr5 123440054 123440655 -76189495 - L1ME1 LINE L1 -241 5925 5369 258 81 0 0 chr5 123440655 123440692 -76189458 + (TA)n Simple_repeat Simple_repeat 2 38 0 2868 222 29 46 chr5 123440692 123441159 -76188991 - L1ME1 LINE L1 -797 5369 4896 2181 99 7 3 chr5 123441164 123441467 -76188683 + AluSg SINE Alu 1 304 -6 3943 174 82 8 chr5 123441494 123442266 -76187884 + L1PA13 LINE L1 2 830 -5957 5410 244 70 48 chr5 123442309 123444533 -76185617 + L1M4 LINE L1 2334 4619 -1527 2157 57 15 0 chr5 123444533 123444796 -76185354 - AluSp SINE Alu -46 267 1 5410 244 70 48 chr5 123444796 123445054 -76185096 + L1M4 LINE L1 4619 4870 -1276 3560 94 0 4 chr5 123445081 123445580 -76184570 - L1PA13 LINE L1 -5 6158 5662 6978 182 14 75 chr5 123445589 123447066 -76183084 - SVA Other Other 0 1386 1 442 204 114 0 chr5 123447157 123447245 -76182905 - FRAM SINE Alu -47 129 32 1312 96 10 0 chr5 123447246 123447443 -76182707 - L1P4 LINE L1 -489 6325 6127 2757 127 5 11 chr5 123447449 123447811 -76182339 - L1PB1 LINE L1 -1 6150 5790 339 25 0 0 chr5 123447811 123447851 -76182299 + (TG)n Simple_repeat Simple_repeat 2 41 0 2757 127 5 11 chr5 123447851 123447937 -76182213 - L1PB1 LINE L1 -361 5790 5705 2607 151 11 17 chr5 123447937 123448461 -76181689 - MER41B-int LTR ERV1 -1462 3553 3033 2315 95 0 0 chr5 123448466 123448761 -76181389 - AluSg SINE Alu -15 295 1 747 78 0 0 chr5 123448784 123448887 -76181263 + (TTC)n Simple_repeat Simple_repeat 2 104 0 384 119 0 0 chr5 123448888 123448947 -76181203 - MER41B-int LTR ERV1 -3987 1959 1901 2007 156 45 3 chr5 123448948 123449300 -76180850 - MER41B-int LTR ERV1 -5166 2371 2005 4334 102 41 24 chr5 123449301 123449979 -76180171 - MER41B-int LTR ERV1 -5256 690 1 860 159 0 19 chr5 123449980 123450137 -76180013 - MER41B LTR ERV1 -1 634 481 13723 180 26 110 chr5 123450137 123450374 -76179776 - L1P4 LINE L1 -677 6142 5887 2482 48 0 0 chr5 123450374 123450669 -76179481 - AluY SINE Alu -16 295 1 13723 180 26 110 chr5 123450669 123451377 -76178773 - L1P4 LINE L1 -932 5887 5121 1655 138 76 34 chr5 123451377 123451731 -76178419 - THE1C LTR MaLR 0 375 7 1003 165 75 56 chr5 123451729 123451995 -76178155 - THE1C LTR MaLR -104 271 1 * 13723 180 26 110 chr5 123451995 123452663 -76177487 - L1P4 LINE L1 -1962 4857 4113 2288 64 3 3 chr5 123452663 123452977 -76177173 - AluY SINE Alu 0 314 1 13723 180 26 110 chr5 123452977 123453837 -76176313 - L1P4 LINE L1 -2706 4113 3183 2141 129 3 3 chr5 123453837 123454140 -76176010 - AluSp SINE Alu -10 303 1 13723 180 26 110 chr5 123454140 123455469 -76174681 - L1P4 LINE L1 -3636 3183 2366 7753 138 13 58 chr5 123455469 123456814 -76173336 + HSMAR1 DNA Mariner 4 1287 0 13723 180 26 110 chr5 123456814 123458220 -76171930 - L1P4 LINE L1 -4453 2366 844 4111 188 54 3 chr5 123458223 123459173 -76170977 - L1 LINE L1 -901 5245 4248 1639 266 136 19 chr5 123459184 123459466 -76170684 - L1MEc LINE L1 -5577 819 571 208 51 26 26 chr5 123459466 123459505 -76170645 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1639 266 136 19 chr5 123459505 123459915 -76170235 - L1MEc LINE L1 -5825 571 46 26 0 0 0 chr5 123460087 123460113 -76170037 + AT_rich Low_complexity Low_complexity 1 26 0 198 0 0 0 chr5 123461012 123461034 -76169116 + (T)n Simple_repeat Simple_repeat 1 22 0 21 36 0 0 chr5 123461852 123461880 -76168270 + AT_rich Low_complexity Low_complexity 1 28 0 28 71 0 0 chr5 123461899 123461955 -76168195 + AT_rich Low_complexity Low_complexity 1 56 0 1995 134 0 0 chr5 123462253 123462536 -76167614 - AluSx SINE Alu -29 283 1 280 161 0 138 chr5 123462678 123462765 -76167385 - MLT1H LTR MaLR 0 549 475 490 260 66 17 chr5 123463139 123463320 -76166830 + MLT1K LTR MaLR 397 586 -2 266 290 48 16 chr5 123463427 123463551 -76166599 - MIR SINE MIR -44 218 91 205 197 79 105 chr5 123464275 123464351 -76165799 + MIR SINE MIR 39 112 -96 287 238 24 24 chr5 123464734 123464818 -76165332 + MER117 DNA MER1_type 90 173 -24 1154 147 82 108 chr5 123467043 123467319 -76162831 + MER39 LTR ERV1 51 490 -217 1752 169 89 43 chr5 123467319 123467782 -76162368 - LTR2B LTR ERV1 0 490 7 1266 127 14 14 chr5 123467783 123468004 -76162146 + MER39 LTR ERV1 487 707 0 182 306 0 0 chr5 123468004 123468053 -76162097 - MER5B DNA MER1_type -1 177 129 2356 92 0 7 chr5 123469146 123469452 -76160698 + AluY SINE Alu 2 305 -6 2316 164 10 10 chr5 123469691 123470094 -76160056 - MER57A LTR ERV1 0 403 1 246 228 37 101 chr5 123470122 123470313 -76159837 - MIR3 SINE MIR -41 167 29 1700 187 40 73 chr5 123470597 123470684 -76159466 - MER39 LTR ERV1 -19 688 600 513 0 0 0 chr5 123470684 123470741 -76159409 + (TTTTA)n Simple_repeat Simple_repeat 3 59 0 2276 83 0 3 chr5 123470750 123471039 -76159111 - AluSq SINE Alu -25 288 1 1700 187 40 73 chr5 123471039 123471456 -76158694 - MER39 LTR ERV1 -115 592 7 21 0 0 0 chr5 123472481 123472502 -76157648 + AT_rich Low_complexity Low_complexity 1 21 0 468 338 54 20 chr5 123474205 123474409 -76155741 - MIR SINE MIR -49 213 3 387 0 0 0 chr5 123474665 123474708 -76155442 + (TCCA)n Simple_repeat Simple_repeat 2 44 0 2388 166 76 0 chr5 123474954 123475401 -76154749 + MER31A LTR ERV1 1 481 -4 2452 101 53 25 chr5 123476933 123477369 -76152781 - LTR7 LTR ERV1 -2 448 1 2354 85 45 13 chr5 123477369 123477747 -76152403 - HERVH LTR ERV1 0 7713 7324 1272 120 23 9 chr5 123477747 123477964 -76152186 - HERVH LTR ERV1 -1894 5819 5600 2903 136 0 4 chr5 123477968 123478584 -76151566 - HERVH LTR ERV1 -2567 5146 4488 3277 89 4 4 chr5 123478586 123479080 -76151070 - HERVH LTR ERV1 -3720 3993 3500 791 143 27 0 chr5 123479079 123479226 -76150924 - HERVH LTR ERV1 -4423 3290 3140 * 14340 119 22 28 chr5 123479220 123482329 -76147821 - HERVH LTR ERV1 -4726 2987 1 2606 90 60 23 chr5 123482331 123482763 -76147387 - LTR7 LTR ERV1 -2 448 1 180 351 91 13 chr5 123483873 123483950 -76146200 - L2 LINE L2 -36 3277 3195 35 0 0 0 chr5 123484046 123484081 -76146069 + AT_rich Low_complexity Low_complexity 1 35 0 261 254 74 66 chr5 123484727 123484849 -76145301 + MIR3 SINE MIR 70 192 -16 415 221 260 0 chr5 123484959 123485086 -76145064 + MER5A DNA MER1_type 30 189 0 6216 137 52 29 chr5 123487236 123488438 -76141712 + Tigger3b DNA MER2_type 1 1230 -1 535 183 0 0 chr5 123540093 123540186 -76089964 - Tigger7 DNA MER2_type 0 2487 2395 1580 177 4 14 chr5 123540186 123540463 -76089687 - Tigger7 DNA MER2_type -2213 274 1 829 259 67 0 chr5 123540492 123540802 -76089348 - AluY SINE Alu 0 329 1 3634 152 14 9 chr5 123541437 123542087 -76088063 + MER50 LTR ERV1 1 653 -81 307 277 0 21 chr5 123542234 123542328 -76087822 - L1ME LINE L1 -498 5623 5532 2379 42 0 3 chr5 123543006 123543329 -76086821 + AluY SINE Alu 1 322 0 401 296 118 36 chr5 123543636 123543856 -76086294 - MIR SINE MIR -14 248 11 21 0 0 0 chr5 123544221 123544242 -76085908 + AT_rich Low_complexity Low_complexity 1 21 0 294 345 31 62 chr5 123545404 123545598 -76084552 + L2 LINE L2 3117 3304 -9 539 259 58 0 chr5 123545601 123545740 -76084410 - MER58B DNA MER1_type -1 340 194 2064 108 0 48 chr5 123546919 123547235 -76082915 - AluSx SINE Alu -11 301 1 2115 66 0 0 chr5 123547413 123547684 -76082466 - AluY SINE Alu -40 271 1 1117 195 164 40 chr5 123548656 123548740 -76081410 + MLT1A1 LTR MaLR 31 103 -262 2225 181 9 45 chr5 123548740 123549181 -76080969 - MSTC LTR MaLR -2 426 2 1117 195 164 40 chr5 123549181 123549394 -76080756 + MLT1A1 LTR MaLR 103 365 0 227 263 25 0 chr5 123549808 123549888 -76080262 + (TTCA)n Simple_repeat Simple_repeat 4 85 0 450 0 0 0 chr5 123550110 123550160 -76079990 + (TA)n Simple_repeat Simple_repeat 1 50 0 611 277 63 74 chr5 123551244 123551594 -76078556 + L2 LINE L2 2968 3313 0 2728 251 43 38 chr5 123552537 123554019 -76076131 + L1ME2 LINE L1 4615 6104 -60 43 35 0 0 chr5 123554288 123554345 -76075805 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr5 123554524 123554545 -76075605 + AT_rich Low_complexity Low_complexity 1 21 0 1943 39 0 4 chr5 123554968 123555202 -76074948 + AluY SINE Alu 1 233 -78 270 81 0 0 chr5 123556064 123556101 -76074049 + (GGGAGA)n Simple_repeat Simple_repeat 6 42 0 367 115 39 225 chr5 123558016 123558238 -76071912 - L1MC4a LINE L1 -723 7079 6863 404 235 10 0 chr5 123559634 123559732 -76070418 - L1MC4a LINE L1 -624 7184 7086 248 289 256 16 chr5 123560176 123560297 -76069853 - MIR SINE MIR -97 165 16 273 188 31 104 chr5 123560510 123560606 -76069544 - MIR SINE MIR -157 105 17 266 213 25 33 chr5 123563711 123563833 -76066317 + (TTA)n Simple_repeat Simple_repeat 3 123 0 319 265 142 71 chr5 123564916 123565127 -76065023 - L2 LINE L2 -6 3307 3082 772 263 153 27 chr5 123565397 123566281 -76063869 + L1ME LINE L1 4799 5780 -382 2060 121 3 0 chr5 123566320 123566626 -76063524 + AluY SINE Alu 1 307 -4 1599 205 6 22 chr5 123567021 123567416 -76062734 - AluJb SINE Alu 0 390 1 1420 205 33 39 chr5 123567875 123568212 -76061938 + MLT1A1 LTR MaLR 31 365 0 185 0 0 39 chr5 123568213 123568239 -76061911 + (TTATA)n Simple_repeat Simple_repeat 3 27 0 310 349 83 19 chr5 123568332 123568707 -76061443 - L1ME LINE L1 -353 5809 5411 457 273 104 64 chr5 123568772 123569581 -76060569 - L1ME LINE L1 -823 5323 4483 5832 109 8 2 chr5 123569667 123570598 -76059552 + L1PB2 LINE L1 5299 6234 0 26 0 0 0 chr5 123570599 123570625 -76059525 + AT_rich Low_complexity Low_complexity 1 26 0 334 262 105 47 chr5 123570647 123570819 -76059331 - L1ME LINE L1 -1807 4339 4158 21 0 0 0 chr5 123570857 123570878 -76059272 + AT_rich Low_complexity Low_complexity 1 21 0 562 305 57 27 chr5 123570970 123571232 -76058918 + MLT1K LTR MaLR 315 584 -4 941 220 10 0 chr5 123573395 123573595 -76056555 + AluSg/x SINE Alu 107 308 -4 252 0 0 0 chr5 123573628 123573656 -76056494 + (A)n Simple_repeat Simple_repeat 1 28 0 1817 95 19 11 chr5 123574602 123574864 -76055286 + AluSc SINE Alu 1 264 -45 24 0 0 0 chr5 123575102 123575126 -76055024 + AT_rich Low_complexity Low_complexity 1 24 0 1967 147 52 43 chr5 123575156 123575480 -76054670 - THE1C LTR MaLR 0 375 46 464 59 132 0 chr5 123575480 123575548 -76054602 + MADE1 DNA Mariner 4 80 0 1967 147 52 43 chr5 123575548 123575591 -76054559 - THE1C LTR MaLR -329 46 5 22 0 0 0 chr5 123576186 123576208 -76053942 + AT_rich Low_complexity Low_complexity 1 22 0 292 164 14 14 chr5 123576409 123576482 -76053668 + (TG)n Simple_repeat Simple_repeat 2 74 0 229 358 12 0 chr5 123576627 123576708 -76053442 - L2 LINE L2 0 3272 3191 289 380 152 15 chr5 123576964 123577353 -76052797 - L2 LINE L2 -434 2880 2439 26 0 0 0 chr5 123577527 123577553 -76052597 + AT_rich Low_complexity Low_complexity 1 26 0 233 368 82 6 chr5 123577727 123577909 -76052241 + MIR3 SINE MIR 10 205 -3 253 192 55 41 chr5 123578342 123578415 -76051735 - MLT1J LTR MaLR 0 511 438 573 285 66 52 chr5 123578532 123578820 -76051330 - MLT1J LTR MaLR -215 296 5 225 0 0 0 chr5 123578861 123578886 -76051264 + (TA)n Simple_repeat Simple_repeat 2 26 0 281 68 23 0 chr5 123578887 123578931 -76051219 + (CA)n Simple_repeat Simple_repeat 2 46 0 1468 98 8 66 chr5 123579146 123579390 -76050760 + MER30 DNA MER1_type 1 230 0 25 0 0 0 chr5 123580442 123580467 -76049683 + AT_rich Low_complexity Low_complexity 1 25 0 2093 162 31 64 chr5 123581558 123582182 -76047968 - LTR48B LTR ERV1 0 707 1 527 266 35 52 chr5 123582454 123582627 -76047523 + MIR SINE MIR 77 246 -16 189 0 0 0 chr5 123583043 123583064 -76047086 + (A)n Simple_repeat Simple_repeat 1 21 0 23 33 0 0 chr5 123583137 123583167 -76046983 + AT_rich Low_complexity Low_complexity 1 30 0 517 225 13 0 chr5 123583383 123583534 -76046616 + CT-rich Low_complexity Low_complexity 2 154 0 1579 202 144 75 chr5 123583682 123584280 -76045870 + LTR48B LTR ERV1 1 639 -5 346 364 31 26 chr5 123584567 123584762 -76045388 + L2 LINE L2 2865 3060 -212 25 51 0 0 chr5 123585503 123585542 -76044608 + AT_rich Low_complexity Low_complexity 1 39 0 322 275 0 0 chr5 123586640 123586709 -76043441 + Tigger2 DNA MER2_type 1 69 -2649 * 2691 146 20 11 chr5 123586689 123587140 -76043010 + Tigger2 DNA MER2_type 2264 2718 0 21 36 0 0 chr5 123587770 123587798 -76042352 + AT_rich Low_complexity Low_complexity 1 28 0 1058 191 45 0 chr5 123588254 123588453 -76041697 - AluJo SINE Alu -18 294 87 232 348 78 17 chr5 123589074 123589189 -76040961 - MIR SINE MIR -67 141 20 1976 138 15 49 chr5 123589401 123589808 -76040342 + L1MA8 LINE L1 5893 6285 -6 531 286 89 37 chr5 123590016 123590285 -76039865 + L2 LINE L2 2906 3188 -125 230 292 96 18 chr5 123590414 123590534 -76039616 + MIR SINE MIR 35 155 -63 674 367 154 26 chr5 123590774 123591572 -76038578 - L3 LINE CR1 -649 928 29 24 32 0 0 chr5 123592431 123592462 -76037688 + AT_rich Low_complexity Low_complexity 1 31 0 219 152 0 0 chr5 123592900 123592946 -76037204 + CT-rich Low_complexity Low_complexity 2 47 0 195 184 0 0 chr5 123593332 123593370 -76036780 + CT-rich Low_complexity Low_complexity 3 40 0 840 218 68 68 chr5 123593577 123593843 -76036307 - MER65B LTR ERV1 0 531 196 324 0 0 0 chr5 123593870 123593906 -76036244 + (TG)n Simple_repeat Simple_repeat 2 37 0 241 320 58 32 chr5 123594003 123594159 -76035991 - MER5B DNA MER1_type -17 161 2 301 257 18 0 chr5 123594224 123594333 -76035817 + CT-rich Low_complexity Low_complexity 2 112 0 317 229 64 9 chr5 123594796 123594905 -76035245 + L1ME4a LINE L1 5959 6073 -48 207 0 0 0 chr5 123594926 123594949 -76035201 + (TTA)n Simple_repeat Simple_repeat 1 23 0 27 81 0 0 chr5 123595290 123595352 -76034798 + AT_rich Low_complexity Low_complexity 1 62 0 207 283 0 17 chr5 123595499 123595559 -76034591 + CT-rich Low_complexity Low_complexity 3 61 0 1837 165 172 21 chr5 123595612 123596030 -76034120 + MER101B LTR ERV1 1 481 -89 349 344 11 50 chr5 123597039 123597219 -76032931 + MER5B DNA MER1_type 1 173 -5 235 250 51 17 chr5 123597503 123597613 -76032537 + MIR SINE MIR 37 150 -58 574 311 53 81 chr5 123598292 123598762 -76031388 - LTR16A1 LTR ERVL 0 457 1 1806 255 52 81 chr5 123599171 123599243 -76030907 + L1ME LINE L1 9 82 -5988 294 29 0 0 chr5 123599243 123599278 -76030872 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1806 255 52 81 chr5 123599278 123599662 -76030488 + L1ME LINE L1 82 476 -5594 195 42 0 0 chr5 123599662 123599686 -76030464 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 1806 255 52 81 chr5 123599686 123600141 -76030009 + L1ME LINE L1 476 894 -5176 764 391 30 13 chr5 123600410 123601197 -76028953 - HERV16 LTR ERVL -926 4838 3969 * 910 327 45 49 chr5 123601194 123601363 -76028787 - HERV16 LTR ERVL -2789 2207 2039 2036 141 0 7 chr5 123601363 123601669 -76028481 + AluSq SINE Alu 1 304 -9 910 327 45 49 chr5 123601669 123601970 -76028180 - HERV16 LTR ERVL -2957 2039 1739 1344 335 79 47 chr5 123602054 123603220 -76026930 - HERV16 LTR ERVL -3440 1556 354 459 314 83 16 chr5 123603540 123603782 -76026368 - LTR16A1 LTR ERVL 0 457 200 1912 177 6 23 chr5 123604817 123605168 -76024982 + MER7A DNA MER2_type 4 346 0 234 305 0 0 chr5 123605278 123605337 -76024813 + (TG)n Simple_repeat Simple_repeat 2 60 0 195 309 122 57 chr5 123606183 123606429 -76023721 - L3 LINE CR1 -88 1489 1228 21 0 0 0 chr5 123606429 123606450 -76023700 + AT_rich Low_complexity Low_complexity 1 21 0 234 156 0 0 chr5 123607537 123607582 -76022568 + T-rich Low_complexity Low_complexity 1 45 0 294 29 0 0 chr5 123607712 123607747 -76022403 + (TTC)n Simple_repeat Simple_repeat 2 36 0 186 125 0 0 chr5 123607747 123607774 -76022376 + (TTA)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr5 123608428 123608449 -76021701 + AT_rich Low_complexity Low_complexity 1 21 0 239 305 127 19 chr5 123608587 123608741 -76021409 - MIR SINE MIR -55 153 38 194 275 63 70 chr5 123608967 123609109 -76021041 + MIR SINE MIR 26 166 -96 328 222 30 22 chr5 123609141 123609178 -76020972 + (TA)n Simple_repeat Simple_repeat 2 37 -100 2279 153 64 7 chr5 123609178 123609583 -76020567 + MSTA LTR MaLR 1 428 0 328 222 30 22 chr5 123609583 123609680 -76020470 + (TA)n Simple_repeat Simple_repeat 37 137 0 421 239 42 49 chr5 123609680 123609822 -76020328 - MIR SINE MIR -14 248 108 1824 211 11 3 chr5 123609832 123610188 -76019962 + MLT1A1 LTR MaLR 7 365 0 241 323 61 10 chr5 123610189 123610288 -76019862 - MIR SINE MIR -156 106 3 203 380 134 7 chr5 123610288 123610423 -76019727 + L2 LINE L2 3089 3241 -31 221 374 99 37 chr5 123610977 123611271 -76018879 - L2 LINE L2 -938 2376 2065 220 219 0 16 chr5 123611286 123611350 -76018800 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 279 0 0 0 chr5 123611350 123611381 -76018769 + (CA)n Simple_repeat Simple_repeat 2 32 0 1367 167 9 0 chr5 123611409 123611631 -76018519 + MER58A DNA MER1_type 1 224 0 2459 109 17 11 chr5 123612464 123612822 -76017328 - MER1A DNA MER1_type 0 529 170 200 86 29 0 chr5 123613553 123613588 -76016562 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 1618 84 4 4 chr5 123613701 123613926 -76016224 - L1PA7 LINE L1 -1487 4659 4435 6783 64 7 1 chr5 123613926 123615415 -76014735 + L1PA7 LINE L1 4670 6164 0 740 295 105 24 chr5 123615775 123616148 -76014002 - MLT1I LTR MaLR -6 403 1 467 311 6 28 chr5 123616315 123616495 -76013655 + MIR SINE MIR 53 228 -34 21 36 0 0 chr5 123616605 123616633 -76013517 + AT_rich Low_complexity Low_complexity 1 28 0 271 130 0 22 chr5 123617985 123618031 -76012119 + L2 LINE L2 3269 3313 0 26 0 0 0 chr5 123618137 123618163 -76011987 + AT_rich Low_complexity Low_complexity 1 26 0 26 30 0 0 chr5 123618497 123618530 -76011620 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 123619743 123619766 -76010384 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 123619844 123619866 -76010284 + AT_rich Low_complexity Low_complexity 1 22 0 294 73 0 0 chr5 123620027 123620068 -76010082 + (TA)n Simple_repeat Simple_repeat 2 42 0 921 174 7 0 chr5 123620206 123620361 -76009789 + FRAM SINE Alu 17 172 -4 23 33 0 0 chr5 123620373 123620403 -76009747 + AT_rich Low_complexity Low_complexity 1 30 0 1907 171 62 8 chr5 123623435 123623803 -76006347 - MLT1B LTR MaLR 0 390 3 268 234 62 0 chr5 123624762 123624826 -76005324 + MIR SINE MIR 180 247 -15 43 0 0 0 chr5 123624839 123624882 -76005268 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 123625582 123625604 -76004546 + AT_rich Low_complexity Low_complexity 1 22 0 278 311 113 20 chr5 123626154 123626305 -76003845 + MER5A DNA MER1_type 17 181 -8 508 111 0 0 chr5 123629408 123629480 -76000670 + FRAM/FAM SINE Alu 13 84 -92 393 296 163 6 chr5 123630823 123630995 -75999155 + MIR SINE MIR 2 200 -62 207 298 58 99 chr5 123631774 123631945 -75998205 + MIR SINE MIR 28 191 -71 507 95 0 0 chr5 123632034 123632108 -75998042 + (TCCCC)n Simple_repeat Simple_repeat 5 78 0 1810 136 61 0 chr5 123633052 123633332 -75996818 - AluSc SINE Alu -9 300 4 358 293 63 34 chr5 123634200 123634405 -75995745 - MIR SINE MIR -2 260 50 772 302 86 43 chr5 123634425 123634889 -75995261 + L2 LINE L2 2106 2589 -725 1808 153 21 3 chr5 123635030 123635312 -75994838 - AluSx SINE Alu -23 289 3 267 269 77 0 chr5 123635645 123635749 -75994401 + MER103 DNA DNA 7 118 -48 410 256 0 0 chr5 123636053 123636139 -75994011 - MER63 DNA MER1_type -297 764 679 182 268 28 42 chr5 123636750 123636821 -75993329 + L2 LINE L2 2443 2512 -802 22 0 0 0 chr5 123639057 123639079 -75991071 + AT_rich Low_complexity Low_complexity 1 22 0 217 344 0 0 chr5 123639573 123639637 -75990513 - MIR SINE MIR -192 70 7 2427 112 11 19 chr5 123639956 123640323 -75989827 - THE1B LTR MaLR 0 364 1 4248 215 68 5 chr5 123640375 123641348 -75988802 - MER45B DNA AcHobo 0 1040 7 580 361 40 7 chr5 123641368 123641670 -75988480 + LTR16B LTR ERVL 78 389 -75 1969 305 52 14 chr5 123642361 123643078 -75987072 + MERVL LTR ERVL 729 1472 -3524 3119 319 62 37 chr5 123643170 123645159 -75984991 + MERVL LTR ERVL 1697 3549 -1447 2127 216 47 28 chr5 123645159 123645669 -75984481 + MLT2B1 LTR ERVL 1 520 0 3119 319 62 37 chr5 123645669 123645904 -75984246 + MERVL LTR ERVL 3549 3777 -1219 581 318 76 43 chr5 123645928 123646414 -75983736 + MERVL LTR ERVL 4108 4618 -867 794 218 127 0 chr5 123647218 123647415 -75982735 - MER58A DNA MER1_type -1 223 2 659 351 41 14 chr5 123647422 123647787 -75982363 + LTR16B LTR ERVL 14 388 -76 182 37 37 0 chr5 123648210 123648237 -75981913 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 400 211 16 16 chr5 123648912 123649016 -75981134 - MER5A DNA MER1_type -82 107 4 420 250 127 72 chr5 123649052 123649134 -75981016 + MLT1L LTR MaLR 168 244 -371 3555 124 13 4 chr5 123649134 123649656 -75980494 - MER1A DNA MER1_type 0 527 1 420 250 127 72 chr5 123649656 123649849 -75980301 + MLT1L LTR MaLR 244 458 -157 322 300 39 23 chr5 123650019 123650149 -75980001 + MIR SINE MIR 116 247 -15 931 294 36 12 chr5 123650167 123650500 -75979650 - L3 LINE CR1 -101 1476 1136 271 310 69 0 chr5 123650743 123650859 -75979291 - MER94 DNA DNA -10 124 1 1036 282 4 14 chr5 123651618 123651895 -75978255 - Tigger7 DNA MER2_type -2213 274 1 2274 62 65 0 chr5 123651942 123652234 -75977916 - AluY SINE Alu 0 311 1 232 347 0 0 chr5 123652307 123652382 -75977768 - MER5C DNA MER1_type -248 76 2 2191 133 55 6 chr5 123653115 123653462 -75976688 - THE1B LTR MaLR 0 364 1 340 310 19 63 chr5 123655482 123655640 -75974510 - L3 LINE CR1 -13 1564 1414 21 71 0 0 chr5 123655760 123655802 -75974348 + AT_rich Low_complexity Low_complexity 1 42 0 225 0 0 0 chr5 123656051 123656076 -75974074 + (T)n Simple_repeat Simple_repeat 1 25 0 369 403 60 9 chr5 123656803 123657019 -75973131 - L2 LINE L2 -30 3242 3016 440 281 38 38 chr5 123657026 123657225 -75972925 + MIR SINE MIR 55 252 -10 330 306 132 0 chr5 123657241 123657385 -75972765 - MIR3 SINE MIR -13 195 33 723 320 81 44 chr5 123657812 123657860 -75972290 - L3 LINE CR1 -2 1575 1530 730 188 29 113 chr5 123657860 123657905 -75972245 - MER20 DNA MER1_type 0 219 172 2249 100 3 3 chr5 123657905 123658214 -75971936 - AluSg1 SINE Alu 0 309 1 730 188 29 113 chr5 123658214 123658407 -75971743 - MER20 DNA MER1_type -47 172 1 723 320 81 44 chr5 123658407 123658817 -75971333 - L3 LINE CR1 -47 1530 1100 350 316 44 0 chr5 123658835 123658949 -75971201 - MIR SINE MIR -58 150 32 334 248 76 9 chr5 123659177 123659282 -75970868 + MIR SINE MIR 96 207 -55 300 294 119 21 chr5 123660362 123660505 -75969645 + LTR67 LTR ERVL 40 196 -361 493 235 159 6 chr5 123660750 123660920 -75969230 + MIR SINE MIR 57 252 -10 237 328 48 53 chr5 123661258 123661447 -75968703 - L2 LINE L2 -237 3035 2848 542 143 2 34 chr5 123661549 123661669 -75968481 + MLT-int LTR MaLR 1530 1707 -6 2253 191 21 0 chr5 123661674 123662097 -75968053 + MSTB1 LTR MaLR 1 432 0 486 333 56 9 chr5 123662111 123662327 -75967823 - L2 LINE L2 -598 2716 2491 270 311 105 44 chr5 123662962 123663190 -75966960 + MIR SINE MIR 13 254 -8 183 42 0 0 chr5 123663628 123663652 -75966498 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 219 403 32 8 chr5 123663905 123664029 -75966121 - L2 LINE L2 -9 3263 3137 6003 101 12 3 chr5 123664032 123664963 -75965187 + L1PA13 LINE L1 5214 6152 -11 259 288 0 25 chr5 123665051 123665131 -75965019 + L2 LINE L2 3195 3272 0 257 118 20 0 chr5 123665709 123665760 -75964390 + (TGAA)n Simple_repeat Simple_repeat 1 52 0 625 295 6 12 chr5 123666108 123666281 -75963869 + MER5B DNA MER1_type 7 178 0 435 260 162 19 chr5 123666328 123666482 -75963668 - MER5A DNA MER1_type 0 189 14 809 171 75 0 chr5 123666548 123666694 -75963456 - THE1B LTR MaLR -11 353 197 2483 63 6 9 chr5 123669573 123669906 -75960244 - L1PA6 LINE L1 -15 6139 5808 219 204 0 0 chr5 123669939 123669988 -75960162 + MIR SINE MIR 150 198 -64 24 32 0 0 chr5 123670536 123670567 -75959583 + AT_rich Low_complexity Low_complexity 1 31 0 397 336 38 38 chr5 123670841 123671213 -75958937 - L1MC4a LINE L1 -1923 5885 5514 274 266 13 13 chr5 123672251 123672330 -75957820 + L3 LINE CR1 817 895 -682 808 326 74 31 chr5 123672390 123672847 -75957303 + L3 LINE CR1 1031 1507 -70 1992 129 17 3 chr5 123672992 123673279 -75956871 - AluSq SINE Alu -22 291 1 2136 161 57 5 chr5 123673434 123673837 -75956313 + MSTA LTR MaLR 1 424 -4 7241 196 48 2 chr5 123673841 123675220 -75954930 + MSTA-int LTR MaLR 1 1442 -209 1839 197 40 5 chr5 123675225 123675605 -75954545 + LTR60 LTR ERV1 4 396 -190 879 138 11 43 chr5 123675722 123675910 -75954240 + LTR60 LTR ERV1 405 586 0 1243 98 5 34 chr5 123676058 123676263 -75953887 + MSTA-int LTR MaLR 1376 1574 -6 2214 174 46 14 chr5 123676269 123676683 -75953467 + MSTA LTR MaLR 2 428 0 3032 223 20 9 chr5 123677359 123678005 -75952145 - MER82 DNA MER2_type 0 653 1 212 333 14 0 chr5 123678236 123678308 -75951842 + GA-rich Low_complexity Low_complexity 3 75 0 186 208 0 0 chr5 123680688 123680736 -75949414 + (ATG)n Simple_repeat Simple_repeat 1 48 0 329 338 96 9 chr5 123680741 123680960 -75949190 - MIR SINE MIR -8 254 17 478 235 170 20 chr5 123681074 123681227 -75948923 - MER5A DNA MER1_type -6 183 8 213 338 14 14 chr5 123681411 123681485 -75948665 - MIR SINE MIR -103 105 32 21 0 0 0 chr5 123682090 123682111 -75948039 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 123683079 123683105 -75947045 + AT_rich Low_complexity Low_complexity 1 26 0 1967 127 35 0 chr5 123683191 123683475 -75946675 - AluSg SINE Alu -16 294 1 330 319 62 22 chr5 123683940 123684166 -75945984 - L1MC4a LINE L1 -1907 5901 5667 1982 126 14 3 chr5 123684172 123684466 -75945684 + AluSx SINE Alu 1 297 -15 24 0 0 0 chr5 123684467 123684491 -75945659 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 123684551 123684572 -75945578 + AT_rich Low_complexity Low_complexity 1 21 0 624 250 157 49 chr5 123684883 123685476 -75944674 - HAL1b LINE L1 -302 1046 390 699 289 61 28 chr5 123685532 123685760 -75944390 + L1MC4a LINE L1 5665 5913 -1895 1081 209 93 54 chr5 123685760 123686147 -75944003 - MER57A LTR ERV1 0 403 2 699 289 61 28 chr5 123686147 123686309 -75943841 + L1MC4a LINE L1 5913 6068 -1740 47 44 0 0 chr5 123686329 123686397 -75943753 + AT_rich Low_complexity Low_complexity 1 68 0 1099 181 68 110 chr5 123687481 123687791 -75942359 - AluJb SINE Alu -5 297 1 763 235 61 0 chr5 123689681 123689877 -75940273 - MER3 DNA MER1_type 0 209 2 24 32 0 0 chr5 123689952 123689983 -75940167 + AT_rich Low_complexity Low_complexity 1 31 0 1390 202 12 12 chr5 123690431 123690688 -75939462 + AluJo SINE Alu 30 286 -26 21 0 0 0 chr5 123690782 123690803 -75939347 + AT_rich Low_complexity Low_complexity 1 21 0 407 359 114 29 chr5 123690984 123691299 -75938851 - HAL1 LINE L1 -657 1850 1509 24 0 0 0 chr5 123692417 123692441 -75937709 + AT_rich Low_complexity Low_complexity 1 24 0 310 246 0 0 chr5 123692532 123692597 -75937553 - MIR SINE MIR -92 116 52 407 341 63 37 chr5 123693397 123693855 -75936295 + L1MC4a LINE L1 5454 5806 -356 23 0 0 0 chr5 123694100 123694123 -75936027 + AT_rich Low_complexity Low_complexity 1 23 0 610 281 122 5 chr5 123694612 123694833 -75935317 + MIR SINE MIR 3 249 -13 2079 117 7 0 chr5 123694833 123695138 -75935012 - AluSp SINE Alu 0 307 1 22 35 0 0 chr5 123696637 123696666 -75933484 + AT_rich Low_complexity Low_complexity 1 29 0 26 64 0 0 chr5 123697123 123697170 -75932980 + AT_rich Low_complexity Low_complexity 1 47 0 363 305 76 11 chr5 123698010 123698275 -75931875 - L1MEd LINE L1 -4475 2065 1799 2036 155 0 0 chr5 123698288 123698598 -75931552 - AluSx SINE Alu -2 310 1 322 292 23 35 chr5 123698839 123699010 -75931140 - L1MEd LINE L1 -5053 1477 1337 391 191 53 21 chr5 123699992 123700086 -75930064 + ERVL LTR ERVL 3393 3489 -2275 266 303 37 12 chr5 123700089 123700412 -75929738 + L1ME LINE L1 3129 3459 -2687 454 286 68 5 chr5 123700734 123700926 -75929224 + MER112 DNA MER1_type 47 250 -10 298 293 43 10 chr5 123700929 123701137 -75929013 + L1ME LINE L1 5648 5862 -300 2520 58 7 3 chr5 123701401 123701711 -75928439 + AluY SINE Alu 1 311 0 378 309 79 17 chr5 123701797 123701975 -75928175 + ERVL LTR ERVL 422 610 -5154 26 50 0 0 chr5 123702380 123702420 -75927730 + AT_rich Low_complexity Low_complexity 1 40 0 1349 75 9 84 chr5 123702806 123703020 -75927130 + AluSx SINE Alu 1 198 -114 28 0 0 0 chr5 123703365 123703393 -75926757 + AT_rich Low_complexity Low_complexity 1 28 0 205 265 0 0 chr5 123704406 123704455 -75925695 + (TG)n Simple_repeat Simple_repeat 2 50 0 2495 242 50 18 chr5 123704731 123705515 -75924635 - MER97a DNA MER1_type? -46 848 40 2155 92 73 0 chr5 123707400 123707727 -75922423 - L1PA10 LINE L1 -6 6162 5812 308 308 82 0 chr5 123707924 123708083 -75922067 - L1ME LINE L1 -535 5586 5415 1218 234 61 61 chr5 123708391 123708853 -75921297 - MLT1C LTR MaLR 0 467 6 551 158 50 10 chr5 123708912 123709013 -75921137 - MER5A DNA MER1_type -1 188 84 1810 190 52 3 chr5 123709048 123709412 -75920738 + MLT1B LTR MaLR 5 386 -4 1779 164 55 30 chr5 123709512 123709878 -75920272 - THE1C LTR MaLR 0 375 1 514 286 141 68 chr5 123709881 123710592 -75919558 - L1ME LINE L1 -1252 4894 4132 301 298 182 10 chr5 123710593 123710791 -75919359 - LTR67 LTR ERVL 0 557 326 407 342 30 41 chr5 123711111 123711445 -75918705 - L1ME LINE L1 -2053 4093 3762 622 176 9 0 chr5 123711899 123712007 -75918143 + FLAM_A SINE Alu 21 129 -13 239 276 106 8 chr5 123712212 123712335 -75917815 - L1ME LINE L1 -3142 3004 2870 38 68 0 0 chr5 123712538 123712611 -75917539 + AT_rich Low_complexity Low_complexity 1 73 0 311 296 163 15 chr5 123712719 123712915 -75917235 - L1ME LINE L1 -3660 2486 2262 2018 139 10 0 chr5 123713213 123713523 -75916627 - AluSq SINE Alu 0 313 1 2137 91 0 7 chr5 123713708 123713984 -75916166 - AluSc SINE Alu -35 274 1 180 125 0 0 chr5 123713995 123714027 -75916123 + (TTC)n Simple_repeat Simple_repeat 2 33 0 2170 107 40 0 chr5 123716498 123716797 -75913353 - AluSx SINE Alu 0 312 2 242 345 78 0 chr5 123717218 123717334 -75912816 + L2 LINE L2 3189 3313 0 186 43 0 0 chr5 123717573 123717596 -75912554 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 255 321 50 43 chr5 123718066 123718206 -75911944 + MER5A DNA MER1_type 1 141 -48 223 293 37 12 chr5 123718303 123718385 -75911765 - L2 LINE L2 0 3313 3230 454 313 24 24 chr5 123720202 123720368 -75909782 - MIR3 SINE MIR -6 202 37 26 30 0 0 chr5 123720777 123720810 -75909340 + AT_rich Low_complexity Low_complexity 1 33 0 5907 128 15 54 chr5 123721231 123722093 -75908057 - L1PA13 LINE L1 0 6163 5373 3265 108 43 2 chr5 123722093 123722586 -75907564 - L1PA10 LINE L1 -5 6163 5651 5907 128 15 54 chr5 123722586 123723482 -75906668 - L1PA13 LINE L1 -790 5373 4444 338 353 23 40 chr5 123723508 123723681 -75906469 - MIR SINE MIR -63 145 19 273 304 20 47 chr5 123724145 123724293 -75905857 + LTR16C LTR ERVL 346 489 -2 21 57 0 0 chr5 123725147 123725182 -75904968 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 123729549 123729570 -75900580 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr5 123729644 123729672 -75900478 + AT_rich Low_complexity Low_complexity 1 28 0 260 286 48 12 chr5 123732118 123732202 -75897948 - MIR3 SINE MIR -43 165 79 6080 120 90 99 chr5 123732296 123734160 -75895990 + pTR5 LTR ERV1 743 2438 0 21 0 0 0 chr5 123734826 123734847 -75895303 + AT_rich Low_complexity Low_complexity 1 21 0 300 247 25 37 chr5 123735494 123735575 -75894575 + L1M4c LINE L1 1266 1345 -5039 550 294 93 11 chr5 123735602 123735969 -75894181 + L1M4c LINE L1 1486 1882 -4681 1724 121 56 50 chr5 123736169 123736491 -75893659 - L1PA10 LINE L1 -9 6159 5836 8308 54 22 7 chr5 123736767 123738057 -75892093 - L1PA10 LINE L1 -491 5664 4352 2110 126 0 16 chr5 123739966 123740276 -75889874 + AluSx SINE Alu 1 305 -7 236 214 7 69 chr5 123740508 123740653 -75889497 + T-rich Low_complexity Low_complexity 5 140 0 4313 196 14 11 chr5 123740698 123741557 -75888593 + L1MB3 LINE L1 5319 6180 -3 1935 265 37 81 chr5 123741576 123742308 -75887842 + L1M4b LINE L1 -299 400 -6066 23 0 0 0 chr5 123742582 123742605 -75887545 + AT_rich Low_complexity Low_complexity 1 23 0 1242 243 72 63 chr5 123742800 123743400 -75886750 + L1M4b LINE L1 396 834 -5211 306 284 266 5 chr5 123743469 123743687 -75886463 + L1M4b LINE L1 3051 3325 -3239 * 2143 199 12 2 chr5 123743681 123744109 -75886041 - L1P LINE L1 -1055 5091 4660 977 214 28 69 chr5 123744143 123744433 -75885717 - LTR4 LTR ERV1 -2 594 317 2029 165 8 5 chr5 123744672 123745041 -75885109 + L1PA13 LINE L1 5784 6153 -10 1601 259 107 33 chr5 123745064 123745993 -75884157 + L1M4b LINE L1 3340 4336 -2228 2493 175 41 19 chr5 123746103 123746634 -75883516 + L1MC3 LINE L1 7243 7785 0 223 311 50 50 chr5 123748500 123748619 -75881531 - L2 LINE L2 -15 3298 3180 2442 75 0 0 chr5 123749075 123749381 -75880769 + AluY SINE Alu 1 306 -5 283 253 13 0 chr5 123749399 123749478 -75880672 - MER103 DNA DNA -43 123 44 209 363 102 23 chr5 123749803 123750018 -75880132 - MIR SINE MIR -5 257 26 250 262 83 0 chr5 123750714 123750798 -75879352 - L2 LINE L2 0 3313 3223 216 0 0 0 chr5 123751027 123751051 -75879099 + (TTG)n Simple_repeat Simple_repeat 2 25 0 6379 82 10 6 chr5 123753699 123754704 -75875446 + L1PA5 LINE L1 5138 6145 -9 579 244 23 0 chr5 123755071 123755202 -75874948 - MSTB LTR MaLR -82 344 211 349 248 21 41 chr5 123755202 123755347 -75874803 - L1 LINE L1 -814 5332 5191 667 194 23 8 chr5 123755373 123755502 -75874648 - FLAM_A SINE Alu -4 138 8 4046 226 45 3 chr5 123755509 123756551 -75873599 - L1 LINE L1 -985 5161 4076 860 154 13 0 chr5 123756665 123756814 -75873336 + L1PA13 LINE L1 6003 6153 -10 4282 250 121 45 chr5 123756837 123759014 -75871136 + L1M4 LINE L1 2922 5262 -884 1795 125 4 0 chr5 123759014 123759262 -75870888 + AluY SINE Alu 1 249 -62 3192 224 118 51 chr5 123759376 123761070 -75869080 + L1MC2 LINE L1 3427 5337 -1007 2083 118 10 0 chr5 123761070 123761359 -75868791 + AluY SINE Alu 1 292 -19 3192 224 118 51 chr5 123761359 123762136 -75868014 + L1MC2 LINE L1 5337 6061 -283 622 227 65 9 chr5 123762129 123762345 -75867805 + L1MB8 LINE L1 5112 5339 -807 * 2377 191 33 70 chr5 123762341 123762411 -75867739 + L1MB8 LINE L1 5542 5613 -565 1579 127 0 0 chr5 123762411 123762631 -75867519 + AluSg/x SINE Alu 80 299 -11 2377 191 33 70 chr5 123762631 123763220 -75866930 + L1MB8 LINE L1 5613 6177 -1 616 293 27 31 chr5 123763275 123763497 -75866653 - MIR SINE MIR -41 221 1 427 330 96 66 chr5 123763635 123763968 -75866182 + L2 LINE L2 2929 3271 -1 210 37 0 0 chr5 123764514 123764541 -75865609 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr5 123764579 123764600 -75865550 + AT_rich Low_complexity Low_complexity 1 21 0 7528 30 0 1 chr5 123765301 123766242 -75863908 + L1PA4 LINE L1 5216 6155 0 229 351 40 0 chr5 123766700 123766774 -75863376 - L2 LINE L2 -5 3267 3191 454 342 109 31 chr5 123766846 123767311 -75862839 + L2 LINE L2 2772 3271 -42 24 53 0 0 chr5 123768961 123768999 -75861151 + AT_rich Low_complexity Low_complexity 1 38 0 508 275 83 25 chr5 123769615 123769953 -75860197 + MLT1J1 LTR MaLR 12 398 -48 239 354 56 15 chr5 123770054 123770252 -75859898 + L2 LINE L2 1300 1505 -1809 21 0 0 0 chr5 123770254 123770275 -75859875 + AT_rich Low_complexity Low_complexity 1 21 0 1939 263 71 116 chr5 123770825 123771364 -75858786 + HAL1 LINE L1 383 944 -1563 366 23 0 0 chr5 123771364 123771407 -75858743 + (CA)n Simple_repeat Simple_repeat 1 43 0 1939 263 71 116 chr5 123771407 123772379 -75857771 + HAL1 LINE L1 944 1827 -680 461 208 88 57 chr5 123772398 123772557 -75857593 + HAL1 LINE L1 2140 2303 -204 23 0 0 0 chr5 123772715 123772738 -75857412 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 123773611 123773634 -75856516 + AT_rich Low_complexity Low_complexity 1 23 0 301 314 9 0 chr5 123773799 123773904 -75856246 + (TA)n Simple_repeat Simple_repeat 2 107 0 21 36 0 0 chr5 123773934 123773962 -75856188 + AT_rich Low_complexity Low_complexity 1 28 0 290 323 55 51 chr5 123774030 123774265 -75855885 + MLT1J1 LTR MaLR 71 306 -243 356 274 0 0 chr5 123774330 123774414 -75855736 + MLT1H LTR MaLR 458 541 -8 285 253 28 118 chr5 123775409 123775587 -75854563 + MLT1H-int LTR MaLR 1028 1189 -182 348 259 109 60 chr5 123775733 123775934 -75854216 + MLT1H LTR MaLR 54 264 -285 565 234 109 15 chr5 123776005 123776206 -75853944 + L1M4 LINE L1 3948 4167 -1979 325 251 115 105 chr5 123776264 123776455 -75853695 + MLT1G LTR MaLR 428 650 -4 606 211 135 0 chr5 123776928 123777089 -75853061 + MER5A DNA MER1_type 4 189 0 517 336 24 36 chr5 123777334 123777581 -75852569 + MIR SINE MIR 8 251 -11 21 0 0 0 chr5 123779332 123779353 -75850797 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 123779474 123779503 -75850647 + AT_rich Low_complexity Low_complexity 1 29 0 195 42 0 0 chr5 123780906 123780930 -75849220 + (GA)n Simple_repeat Simple_repeat 2 25 0 313 309 14 73 chr5 123781433 123781762 -75848388 + L1ME LINE L1 5486 5791 -330 2501 64 0 0 chr5 123781878 123782189 -75847961 + AluYa5 SINE Alu 1 311 0 1333 37 0 12 chr5 123782189 123782383 -75847767 + AluY SINE Alu 122 313 0 1881 110 0 58 chr5 123783186 123783478 -75846672 + AluSc SINE Alu 5 279 -30 345 47 0 0 chr5 123783481 123783524 -75846626 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 1589 205 39 36 chr5 123783630 123784069 -75846081 + Charlie4a DNA MER1_type 61 500 -8 378 272 40 16 chr5 123784946 123785071 -75845079 + MIR SINE MIR 131 258 -4 256 211 58 0 chr5 123785409 123785461 -75844689 + MIR SINE MIR 106 160 -102 235 318 9 47 chr5 123786195 123786302 -75843848 - MIR SINE MIR -108 154 52 303 282 39 0 chr5 123789367 123789445 -75840705 - L2 LINE L2 -3 3310 3230 236 77 26 0 chr5 123790777 123790816 -75839334 + (GAAA)n Simple_repeat Simple_repeat 3 42 0 396 0 0 0 chr5 123790817 123790861 -75839289 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr5 123791008 123791029 -75839121 + AT_rich Low_complexity Low_complexity 1 21 0 2161 102 27 0 chr5 123791387 123791681 -75838469 + AluSg SINE Alu 1 302 -8 258 81 0 0 chr5 123791683 123791720 -75838430 + (CAGG)n Simple_repeat Simple_repeat 2 38 0 1784 270 119 13 chr5 123792978 123793678 -75836472 + L1ME3A LINE L1 5371 6144 -26 557 311 11 6 chr5 123795895 123796072 -75834078 - Charlie8 DNA MER1_type -2152 265 88 344 215 44 7 chr5 123796078 123796213 -75833937 + (TA)n Simple_repeat Simple_repeat 1 140 0 393 58 0 0 chr5 123796401 123796453 -75833697 + (TG)n Simple_repeat Simple_repeat 2 53 0 402 34 169 0 chr5 123797717 123797776 -75832374 + MADE1 DNA Mariner 12 80 0 436 288 79 56 chr5 123797948 123798437 -75831713 - HAL1 LINE L1 -1341 1166 667 682 199 199 0 chr5 123798457 123798613 -75831537 - MER58A DNA MER1_type -1 223 37 614 290 201 36 chr5 123798706 123799199 -75830951 - HAL1 LINE L1 -1933 574 1 814 137 0 0 chr5 123799221 123799345 -75830805 + AluSg/x SINE Alu 156 279 -31 414 0 0 0 chr5 123799345 123799391 -75830759 + (CA)n Simple_repeat Simple_repeat 1 46 0 228 67 0 0 chr5 123799390 123799420 -75830730 + (TA)n Simple_repeat Simple_repeat 2 31 0 * 1429 216 186 8 chr5 123800016 123800415 -75829735 - MLT1E2 LTR MaLR -2 624 155 199 284 49 0 chr5 123801139 123801220 -75828930 + MIR SINE MIR 178 262 0 25 0 0 0 chr5 123804139 123804164 -75825986 + AT_rich Low_complexity Low_complexity 1 25 0 1230 172 33 21 chr5 123805019 123805464 -75824686 - LTR54 LTR ERV1 0 510 1 437 311 44 22 chr5 123806942 123807125 -75823025 - MIR SINE MIR -48 214 28 6219 70 15 8 chr5 123807175 123808185 -75821965 - L1PA7 LINE L1 -11 6143 5138 216 0 0 0 chr5 123810827 123810851 -75819299 + (CAA)n Simple_repeat Simple_repeat 2 25 0 250 262 83 0 chr5 123811080 123811164 -75818986 + L2 LINE L2 3223 3313 0 230 358 102 23 chr5 123811860 123812075 -75818075 + MIR SINE MIR 26 257 -5 283 253 13 0 chr5 123812400 123812479 -75817671 + MER103 DNA DNA 44 123 -43 2375 78 0 10 chr5 123812497 123812806 -75817344 - AluY SINE Alu -5 306 1 223 311 50 50 chr5 123813261 123813380 -75816770 + L2 LINE L2 3180 3298 -15 2655 173 50 17 chr5 123815257 123815835 -75814315 - L1MC3 LINE L1 0 7785 7189 227 338 0 12 chr5 123815835 123815915 -75814235 - MLT1F1 LTR MaLR -442 125 47 272 226 36 0 chr5 123815920 123816004 -75814146 - L1MC3 LINE L1 -682 7103 7017 * 3645 221 39 24 chr5 123815989 123816771 -75813379 + L1MC3 LINE L1 6042 6840 -945 1850 149 13 0 chr5 123816771 123817066 -75813084 + AluJo SINE Alu 1 302 -10 189 0 0 0 chr5 123817066 123817087 -75813063 + (CA)n Simple_repeat Simple_repeat 2 22 0 1850 149 13 0 chr5 123817087 123817099 -75813051 + AluJo SINE Alu 302 312 0 3645 221 39 24 chr5 123817099 123817220 -75812930 + L1MC3 LINE L1 6840 6958 -827 207 0 0 0 chr5 123817220 123817243 -75812907 + (TTA)n Simple_repeat Simple_repeat 3 25 0 426 323 40 12 chr5 123817328 123817543 -75812607 + MIR SINE MIR 1 262 0 21 82 0 0 chr5 123817677 123817726 -75812424 + AT_rich Low_complexity Low_complexity 1 49 0 261 0 0 0 chr5 123818171 123818200 -75811950 + (CA)n Simple_repeat Simple_repeat 2 30 0 214 361 8 17 chr5 123819444 123819563 -75810587 + L2 LINE L2 2590 2707 -607 279 0 0 0 chr5 123819593 123819624 -75810526 + (CA)n Simple_repeat Simple_repeat 2 32 0 423 231 94 80 chr5 123819695 123819907 -75810243 + MIR SINE MIR 34 248 -14 341 279 58 39 chr5 123821430 123821623 -75808527 + MLT1F1 LTR MaLR 1 196 -371 786 245 43 39 chr5 123821685 123821918 -75808232 + MLT1F1 LTR MaLR 331 564 -3 245 192 0 0 chr5 123822308 123822360 -75807790 + T-rich Low_complexity Low_complexity 2 53 0 3137 55 8 2 chr5 123822802 123823201 -75806949 - L1P3 LINE L1 -420 5734 5334 2088 94 0 13 chr5 123823201 123823499 -75806651 + L1PA7 LINE L1 5861 6154 0 2912 233 83 41 chr5 123823710 123825343 -75804807 - L1ME1 LINE L1 -5 6956 5260 584 288 16 14 chr5 123825394 123825670 -75804480 - L1ME1 LINE L1 -4150 2791 2221 552 275 90 84 chr5 123825867 123826343 -75803807 - L1ME1 LINE L1 -5021 1402 924 2459 47 0 22 chr5 123826358 123826676 -75803474 - AluY SINE Alu 0 311 1 1245 255 59 15 chr5 123827103 123827495 -75802655 - L1ME1 LINE L1 -5958 465 57 349 261 0 22 chr5 123827557 123827649 -75802501 - L1MC4 LINE L1 -1339 6703 6614 321 322 0 0 chr5 123827641 123827731 -75802419 + L1MC4 LINE L1 6614 6703 -1339 * 340 259 47 0 chr5 123827703 123827788 -75802362 - L1MC4 LINE L1 -1339 6703 6615 325 253 78 39 chr5 123827761 123827915 -75802235 - L1MCa LINE L1 -4363 2063 1904 * 267 290 90 35 chr5 123828792 123828937 -75801213 + MLT1J2 LTR MaLR 66 218 -232 426 200 91 45 chr5 123829015 123829125 -75801025 + MLT1J1 LTR MaLR 361 446 0 428 256 124 70 chr5 123829156 123829429 -75800721 + MER5C DNA MER1_type 36 323 -1 23 33 0 0 chr5 123829719 123829749 -75800401 + AT_rich Low_complexity Low_complexity 1 30 0 40 37 0 0 chr5 123829959 123830013 -75800137 + AT_rich Low_complexity Low_complexity 1 54 0 232 326 0 0 chr5 123830334 123830383 -75799767 + L2 LINE L2 3204 3252 -20 321 320 119 26 chr5 123830500 123830694 -75799456 + MIR SINE MIR 5 216 -46 242 267 69 69 chr5 123830727 123830828 -75799322 - MIR3 SINE MIR -46 162 62 183 42 0 0 chr5 123831423 123831447 -75798703 + (T)n Simple_repeat Simple_repeat 1 24 0 192 245 0 41 chr5 123832639 123832688 -75797462 - MIR SINE MIR -13 249 203 264 337 104 39 chr5 123833216 123833551 -75796599 + MLT1K LTR MaLR 231 587 -1 340 336 97 6 chr5 123833694 123833898 -75796252 - MIR SINE MIR -6 256 39 422 336 89 0 chr5 123834586 123834821 -75795329 - MER102a DNA MER1_type 0 330 75 1964 258 68 14 chr5 123836969 123837729 -75792421 - L1ME LINE L1 -3162 2918 2118 246 298 64 18 chr5 123837746 123837964 -75792186 - L1ME LINE L1 -4006 2074 1847 2146 102 7 7 chr5 123837976 123838271 -75791879 - AluSg SINE Alu -15 295 1 11467 203 34 40 chr5 123838344 123840109 -75790041 + L1MA5 LINE L1 1305 3079 -4283 2073 126 42 31 chr5 123840109 123840466 -75789684 - THE1B LTR MaLR 0 364 4 11467 203 34 40 chr5 123840466 123842311 -75787839 + L1MA5 LINE L1 3079 4934 -2428 1965 166 0 6 chr5 123842311 123842625 -75787525 + AluSx SINE Alu 1 312 0 11467 203 34 40 chr5 123842625 123843748 -75786402 + L1MA5 LINE L1 4934 6062 -1300 1518 185 4 22 chr5 123843748 123844024 -75786126 + AluJb SINE Alu 1 271 -41 11467 203 34 40 chr5 123844024 123845046 -75785104 + L1MA5 LINE L1 6062 7362 0 227 279 0 25 chr5 123845069 123845148 -75785002 - L1ME LINE L1 -4454 1807 1731 4581 91 87 28 chr5 123845156 123845882 -75784268 + L1PA10 LINE L1 5391 6159 -9 566 291 92 68 chr5 123846082 123847104 -75783046 - L1ME LINE L1 -4653 1580 501 580 332 57 49 chr5 123847475 123847842 -75782308 + L2 LINE L2 2935 3304 -9 438 325 38 59 chr5 123849238 123849475 -75780675 + MIR SINE MIR 31 262 0 456 248 16 31 chr5 123849513 123849642 -75780508 - MIR SINE MIR -97 165 39 25 31 0 0 chr5 123849866 123849898 -75780252 + AT_rich Low_complexity Low_complexity 1 32 0 2510 122 0 22 chr5 123850896 123851266 -75778884 - THE1B LTR MaLR 0 364 3 22 0 0 0 chr5 123851371 123851393 -75778757 + AT_rich Low_complexity Low_complexity 1 22 0 660 321 45 19 chr5 123851735 123852055 -75778095 - L1MC/D LINE L1 -573 5583 5322 2401 94 0 0 chr5 123852055 123852363 -75777787 - AluSx SINE Alu -3 309 2 660 321 45 19 chr5 123852363 123852407 -75777743 - L1MC/D LINE L1 -834 5322 5281 987 365 65 33 chr5 123852565 123853355 -75776795 + L2 LINE L2 2159 2973 -341 702 206 60 5 chr5 123857200 123857399 -75772751 + L1M4 LINE L1 5119 5328 -818 341 171 0 53 chr5 123857782 123857858 -75772292 + HAL1b LINE L1 444 515 -833 355 359 30 12 chr5 123858014 123858181 -75771969 + LTR16C LTR ERVL 179 348 -143 2063 126 0 0 chr5 123858202 123858488 -75771662 - AluSx SINE Alu -26 286 1 1189 227 81 11 chr5 123859309 123859471 -75770679 - MLT1E LTR MaLR 0 593 444 794 133 7 0 chr5 123859471 123859606 -75770544 - L1PB1 LINE L1 -3 6148 6013 1189 227 81 11 chr5 123859606 123859953 -75770197 - MLT1E LTR MaLR -149 444 2 1075 215 4 0 chr5 123860163 123860409 -75769741 + L1MA5A LINE L1 5084 5330 -816 * 4562 124 14 15 chr5 123860406 123860493 -75769657 + L1PA15 LINE L1 5389 5475 -693 390 117 33 0 chr5 123860493 123860607 -75769543 + AluS SINE Alu 222 337 0 4562 124 14 15 chr5 123860607 123861268 -75768882 + L1PA15 LINE L1 5475 6167 -1 * 5672 132 35 4 chr5 123861260 123861721 -75768429 + L1MA5A LINE L1 5315 5761 -536 321 26 0 0 chr5 123861721 123861759 -75768391 + (CA)n Simple_repeat Simple_repeat 1 38 0 5672 132 35 4 chr5 123861759 123862250 -75767900 + L1MA5A LINE L1 5761 6296 -1 480 336 167 19 chr5 123862688 123863113 -75767037 - L2 LINE L2 -15 3298 2811 21 0 0 0 chr5 123863446 123863467 -75766683 + AT_rich Low_complexity Low_complexity 1 21 0 2583 41 0 25 chr5 123863712 123864029 -75766121 - AluY SINE Alu -2 309 1 1984 212 55 24 chr5 123864035 123864493 -75765657 + MLT1D LTR MaLR 32 503 -2 673 237 66 44 chr5 123864775 123865003 -75765147 + MIR SINE MIR 20 252 -10 367 293 16 24 chr5 123865480 123865603 -75764547 + L2 LINE L2 3192 3313 0 21 0 0 0 chr5 123866023 123866044 -75764106 + AT_rich Low_complexity Low_complexity 1 21 0 437 202 40 0 chr5 123866945 123867044 -75763106 - L1MC/D LINE L1 -724 5518 5416 963 109 0 0 chr5 123867046 123867183 -75762967 - L1PA7 LINE L1 -3 6151 6015 74 0 0 0 chr5 123867708 123867782 -75762368 + AT_rich Low_complexity Low_complexity 1 74 0 231 279 23 12 chr5 123868694 123868780 -75761370 + CT-rich Low_complexity Low_complexity 4 90 0 32 43 0 0 chr5 123869579 123869625 -75760525 + AT_rich Low_complexity Low_complexity 1 46 0 10127 29 0 154 chr5 123870872 123872517 -75757633 + SVA Other Other 1 1396 0 199 403 42 37 chr5 123873631 123873847 -75756303 + L2 LINE L2 2473 2689 -625 564 281 138 18 chr5 123874665 123874882 -75755268 - MIR SINE MIR -1 261 19 276 297 224 24 chr5 123875112 123875277 -75754873 - MIR SINE MIR -45 217 20 1882 125 41 10 chr5 123876459 123876754 -75753396 - AluSx SINE Alu -8 304 1 467 113 12 0 chr5 123877364 123877444 -75752706 + (TC)n Simple_repeat Simple_repeat 2 82 0 376 114 11 125 chr5 123878354 123878411 -75751739 + L1MA8 LINE L1 6052 6097 -194 1778 165 3 10 chr5 123878411 123878714 -75751436 - AluSx SINE Alu -11 301 1 376 114 11 125 chr5 123878714 123878744 -75751406 + L1MA8 LINE L1 6097 6129 -162 * 839 66 0 0 chr5 123878740 123878846 -75751304 - L1PA7 LINE L1 -501 5671 5566 3602 62 6 0 chr5 123878847 123879314 -75750836 + L1PA7 LINE L1 5685 6154 0 512 231 62 0 chr5 123879319 123879449 -75750701 + L1MA8 LINE L1 6128 6265 -26 535 130 4 63 chr5 123879697 123880219 -75749931 + (TA)n Simple_repeat Simple_repeat 1 491 0 473 293 23 23 chr5 123880905 123881079 -75749071 + MER5B DNA MER1_type 4 177 -1 241 313 35 76 chr5 123881081 123881225 -75748925 + MIR SINE MIR 11 148 -114 220 189 0 0 chr5 123881861 123881898 -75748252 + (TG)n Simple_repeat Simple_repeat 2 38 0 26 64 0 0 chr5 123882206 123882253 -75747897 + AT_rich Low_complexity Low_complexity 1 47 0 400 265 121 26 chr5 123882327 123882599 -75747551 - HAL1b LINE L1 -225 1123 826 280 203 162 27 chr5 123882613 123882687 -75747463 - MER91C DNA MER1_type -26 114 31 357 242 45 45 chr5 123882701 123882833 -75747317 - HAL1b LINE L1 -519 829 698 995 215 0 11 chr5 123883573 123883759 -75746391 - MER5A DNA MER1_type -5 184 1 1068 260 112 27 chr5 123883911 123884349 -75745801 - HAL1b LINE L1 -773 575 101 218 235 18 106 chr5 123885294 123885464 -75744686 + L2 LINE L2 3083 3237 -76 578 275 0 32 chr5 123885574 123885792 -75744358 + L1MA9 LINE L1 6072 6282 -30 456 180 60 10 chr5 123886071 123886171 -75743979 + MIR SINE MIR 97 201 -61 271 188 0 25 chr5 123886173 123886253 -75743897 + (TA)n Simple_repeat Simple_repeat 1 78 0 1962 85 0 12 chr5 123886381 123886640 -75743510 - AluSc SINE Alu 0 309 54 551 238 48 27 chr5 123887183 123887373 -75742777 - L1ME3A LINE L1 -203 5959 5767 954 58 0 0 chr5 123887392 123887513 -75742637 - L1PA3 LINE L1 0 6155 6035 2068 127 16 47 chr5 123888263 123888648 -75741502 - THE1C LTR MaLR -2 373 1 3199 119 10 2 chr5 123888889 123889378 -75740772 + L1PB1 LINE L1 5657 6149 -2 21 82 0 0 chr5 123889737 123889786 -75740364 + AT_rich Low_complexity Low_complexity 1 49 0 208 200 33 0 chr5 123889917 123889977 -75740173 + CT-rich Low_complexity Low_complexity 2 63 0 223 250 38 62 chr5 123891070 123891150 -75739000 + L2 LINE L2 3187 3264 -8 206 172 31 31 chr5 123892196 123892260 -75737890 + (TA)n Simple_repeat Simple_repeat 1 64 0 2304 70 0 35 chr5 123893002 123893316 -75736834 + AluY SINE Alu 1 303 -8 486 326 21 21 chr5 123893580 123893767 -75736383 + MIR3 SINE MIR 19 205 -3 448 381 84 16 chr5 123894771 123895154 -75734996 - L3 LINE CR1 -37 1540 1132 208 365 0 0 chr5 123895921 123895984 -75734166 + L2 LINE L2 3183 3245 -27 329 294 136 26 chr5 123898846 123898895 -75731255 + L1MCa LINE L1 1154 1196 -5230 2183 126 0 0 chr5 123898895 123899204 -75730946 + AluSq SINE Alu 1 309 -4 329 294 136 26 chr5 123899204 123899382 -75730768 + L1MCa LINE L1 1196 1406 -5020 189 266 31 31 chr5 123899519 123899583 -75730567 - MIR3 SINE MIR -12 196 133 37 0 0 0 chr5 123900050 123900087 -75730063 + AT_rich Low_complexity Low_complexity 1 37 0 741 307 124 11 chr5 123900193 123900564 -75729586 - LTR16A LTR ERVL -6 444 32 864 357 72 28 chr5 123901018 123901943 -75728207 + HERVL LTR ERVL 3864 4829 -825 314 345 53 18 chr5 123903057 123903228 -75726922 - LTR16A LTR ERVL -198 252 76 334 399 54 5 chr5 123903285 123903436 -75726714 + L1MCa LINE L1 1758 1925 -4682 1119 208 33 42 chr5 123903436 123903677 -75726473 - MER8 DNA MER2_type 0 239 1 334 399 54 5 chr5 123903677 123903748 -75726402 + L1MCa LINE L1 1925 1991 -4616 300 300 44 0 chr5 123903763 123903853 -75726297 - MLT1D LTR MaLR -149 356 263 3262 81 4 24 chr5 123903864 123904332 -75725818 - L1PA10 LINE L1 0 6168 5710 344 289 53 13 chr5 123904365 123904517 -75725633 + L1ME3A LINE L1 1080 1237 -5159 29 0 0 0 chr5 123904538 123904567 -75725583 + AT_rich Low_complexity Low_complexity 1 29 0 375 268 96 64 chr5 123904577 123904797 -75725353 + L1ME3A LINE L1 1339 1565 -4650 4342 270 91 50 chr5 123904800 123905473 -75724677 + L1ME3A LINE L1 1639 2283 -3932 1903 119 4 4 chr5 123905473 123905751 -75724399 + AluSx SINE Alu 1 278 -34 423 0 0 0 chr5 123905753 123905800 -75724350 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 4342 270 91 50 chr5 123905800 123905825 -75724325 + L1ME3A LINE L1 2283 2306 -3909 2329 65 0 0 chr5 123905825 123906154 -75723996 + AluY SINE Alu 1 311 0 4342 270 91 50 chr5 123906154 123906419 -75723731 + L1ME3A LINE L1 2306 2559 -3656 2158 101 0 3 chr5 123906419 123906737 -75723413 + AluSq SINE Alu 1 313 0 4342 270 91 50 chr5 123906737 123908908 -75721242 + L1ME3A LINE L1 2559 4867 -1348 198 0 0 0 chr5 123908908 123908930 -75721220 + (TA)n Simple_repeat Simple_repeat 2 23 0 4342 270 91 50 chr5 123908930 123909082 -75721068 + L1ME3A LINE L1 4867 5011 -1204 523 260 64 23 chr5 123909154 123909327 -75720823 - L1M4 LINE L1 -1381 4765 4586 484 300 60 15 chr5 123909351 123909821 -75720329 + L1ME3A LINE L1 5713 6237 -2 471 106 71 0 chr5 123909906 123909991 -75720159 - L1PA13 LINE L1 -4 6159 6069 21 0 0 0 chr5 123911354 123911375 -75718775 + AT_rich Low_complexity Low_complexity 1 21 0 335 23 23 0 chr5 123911859 123911903 -75718247 + (TG)n Simple_repeat Simple_repeat 2 46 0 219 139 0 0 chr5 123912143 123912179 -75717971 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 537 135 2 61 chr5 123914114 123914639 -75715511 + (TA)n Simple_repeat Simple_repeat 1 494 0 504 231 62 0 chr5 123914887 123915017 -75715133 - L1MA8 LINE L1 -26 6265 6128 3429 78 6 2 chr5 123915022 123915494 -75714656 - L1PA7 LINE L1 0 6154 5681 771 78 0 0 chr5 123915494 123915596 -75714554 + L1PA7 LINE L1 5570 5671 -483 376 114 11 125 chr5 123915592 123915622 -75714528 - L1MA8 LINE L1 -162 6129 6097 * 1748 169 3 10 chr5 123915622 123915923 -75714227 + AluSx SINE Alu 1 299 -13 376 114 11 125 chr5 123915923 123915980 -75714170 - L1MA8 LINE L1 -194 6097 6052 605 110 10 0 chr5 123916890 123916990 -75713160 + (GA)n Simple_repeat Simple_repeat 2 102 0 1853 132 41 10 chr5 123917600 123917895 -75712255 + AluSx SINE Alu 1 304 -8 276 297 224 24 chr5 123919077 123919242 -75710908 + MIR SINE MIR 20 217 -45 548 286 138 18 chr5 123919472 123919689 -75710461 + MIR SINE MIR 19 261 -1 199 403 42 37 chr5 123920507 123920723 -75709427 - L2 LINE L2 -625 2689 2473 231 61 0 0 chr5 123921834 123921867 -75708283 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 5442 28 2 0 chr5 123921867 123922473 -75707677 - SVA Other Other -23 1363 757 2298 70 0 35 chr5 123922558 123922872 -75707278 + AluY SINE Alu 1 303 -8 486 326 21 21 chr5 123923135 123923322 -75706828 + MIR3 SINE MIR 19 205 -3 448 381 84 16 chr5 123924326 123924709 -75705441 - L3 LINE CR1 -37 1540 1132 208 365 0 0 chr5 123925477 123925540 -75704610 + L2 LINE L2 3183 3245 -27 329 294 136 26 chr5 123928402 123928451 -75701699 + L1MCa LINE L1 1154 1196 -5230 2183 126 0 0 chr5 123928451 123928760 -75701390 + AluSq SINE Alu 1 309 -4 329 294 136 26 chr5 123928760 123928938 -75701212 + L1MCa LINE L1 1196 1406 -5020 189 266 31 31 chr5 123929075 123929139 -75701011 - MIR3 SINE MIR -12 196 133 37 0 0 0 chr5 123929606 123929643 -75700507 + AT_rich Low_complexity Low_complexity 1 37 0 741 307 124 11 chr5 123929749 123930120 -75700030 - LTR16A LTR ERVL -6 444 32 864 357 72 28 chr5 123930574 123931499 -75698651 + HERVL LTR ERVL 3864 4829 -825 314 345 53 18 chr5 123932613 123932784 -75697366 - LTR16A LTR ERVL -198 252 76 334 399 54 5 chr5 123932841 123932992 -75697158 + L1MCa LINE L1 1758 1925 -4682 1119 208 33 42 chr5 123932992 123933233 -75696917 - MER8 DNA MER2_type 0 239 1 334 399 54 5 chr5 123933233 123933304 -75696846 + L1MCa LINE L1 1925 1991 -4616 300 300 44 0 chr5 123933319 123933409 -75696741 - MLT1D LTR MaLR -149 356 263 3262 81 4 24 chr5 123933420 123933888 -75696262 - L1PA10 LINE L1 0 6168 5710 344 289 53 13 chr5 123933921 123934073 -75696077 + L1ME3A LINE L1 1080 1237 -5159 29 0 0 0 chr5 123934094 123934123 -75696027 + AT_rich Low_complexity Low_complexity 1 29 0 375 268 96 64 chr5 123934133 123934353 -75695797 + L1ME3A LINE L1 1339 1565 -4650 4378 269 91 50 chr5 123934356 123935029 -75695121 + L1ME3A LINE L1 1639 2283 -3932 1903 119 4 4 chr5 123935029 123935307 -75694843 + AluSx SINE Alu 1 278 -34 351 0 0 0 chr5 123935309 123935348 -75694802 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 4378 269 91 50 chr5 123935348 123935373 -75694777 + L1ME3A LINE L1 2283 2306 -3909 2329 65 0 0 chr5 123935373 123935702 -75694448 + AluY SINE Alu 1 311 0 4378 269 91 50 chr5 123935702 123935967 -75694183 + L1ME3A LINE L1 2306 2559 -3656 2137 105 0 3 chr5 123935967 123936285 -75693865 + AluSq SINE Alu 1 313 0 4378 269 91 50 chr5 123936285 123938456 -75691694 + L1ME3A LINE L1 2559 4867 -1348 198 0 0 0 chr5 123938456 123938478 -75691672 + (TA)n Simple_repeat Simple_repeat 2 23 0 4378 269 91 50 chr5 123938478 123938630 -75691520 + L1ME3A LINE L1 4867 5011 -1204 523 260 64 23 chr5 123938702 123938875 -75691275 - L1M4 LINE L1 -1381 4765 4586 484 300 60 15 chr5 123938899 123939369 -75690781 + L1ME3A LINE L1 5713 6237 -2 471 106 71 0 chr5 123939454 123939539 -75690611 - L1PA13 LINE L1 -4 6159 6069 21 0 0 0 chr5 123940900 123940921 -75689229 + AT_rich Low_complexity Low_complexity 1 21 0 335 23 23 0 chr5 123941405 123941449 -75688701 + (TG)n Simple_repeat Simple_repeat 2 46 0 219 139 0 0 chr5 123941689 123941725 -75688425 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 272 281 11 22 chr5 123943345 123943434 -75686716 + MIR3 SINE MIR 93 180 -28 21 0 0 0 chr5 123943501 123943522 -75686628 + AT_rich Low_complexity Low_complexity 1 21 0 409 323 116 5 chr5 123945056 123945245 -75684905 - MIR SINE MIR -16 246 37 21 36 0 0 chr5 123946000 123946028 -75684122 + AT_rich Low_complexity Low_complexity 1 28 0 2076 123 0 3 chr5 123946480 123946812 -75683338 - AluSx SINE Alu 0 331 1 21 57 0 0 chr5 123946963 123946998 -75683152 + AT_rich Low_complexity Low_complexity 1 35 0 1636 49 0 0 chr5 123946998 123947203 -75682947 - L1PA4 LINE L1 -3 6152 5948 1660 61 2 2 chr5 123947203 123947443 -75682707 + L1PA4 LINE L1 5750 5987 -174 244 282 0 0 chr5 123947880 123947965 -75682185 + L1MC4 LINE L1 6615 6699 -1343 238 246 0 0 chr5 123948196 123948253 -75681897 + MER94 DNA DNA 71 127 -7 191 296 113 0 chr5 123948908 123948979 -75681171 + L2 LINE L2 2989 3067 -246 244 171 80 0 chr5 123949324 123949412 -75680738 + (TA)n Simple_repeat Simple_repeat 2 96 0 258 136 0 0 chr5 123950319 123950363 -75679787 + (TTC)n Simple_repeat Simple_repeat 1 44 0 241 231 0 19 chr5 123950378 123950430 -75679720 + CT-rich Low_complexity Low_complexity 2 52 0 24 67 0 0 chr5 123951046 123951091 -75679059 + AT_rich Low_complexity Low_complexity 1 45 0 222 37 0 0 chr5 123951584 123951611 -75678539 + (A)n Simple_repeat Simple_repeat 1 27 0 600 356 61 28 chr5 123951769 123952176 -75677974 + L2 LINE L2 2624 3045 -268 277 329 7 20 chr5 123952184 123952330 -75677820 + L1M4 LINE L1 4015 4158 -1988 677 167 0 23 chr5 123952549 123952681 -75677469 + MLT1D LTR MaLR 377 505 0 216 298 122 64 chr5 123952703 123952891 -75677259 + L2 LINE L2 3023 3221 -92 358 263 0 0 chr5 123953284 123953360 -75676790 - MER63 DNA MER1_type -8 1052 977 28 61 0 0 chr5 123955242 123955291 -75674859 + AT_rich Low_complexity Low_complexity 1 49 0 7147 38 1 2 chr5 123955345 123956212 -75673938 + L1PA5 LINE L1 5285 6150 -4 180 0 0 0 chr5 123956891 123956911 -75673239 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6771 9 1 0 chr5 123956913 123957679 -75672471 - L1PA2 LINE L1 -1 6154 5388 22 0 0 0 chr5 123957778 123957800 -75672350 + AT_rich Low_complexity Low_complexity 1 22 0 2074 155 25 6 chr5 123957805 123958160 -75671990 - L1PB4 LINE L1 -13 6143 5782 310 284 23 0 chr5 123958175 123958263 -75671887 + L1MC4 LINE L1 6615 6704 -1338 303 281 0 22 chr5 123958268 123958357 -75671793 - L1MC4 LINE L1 -1340 6702 6616 800 104 0 63 chr5 123958357 123958600 -75671550 + (TATATG)n Simple_repeat Simple_repeat 1 227 0 235 259 47 0 chr5 123958600 123958685 -75671465 + L1MC4 LINE L1 6615 6703 -1339 316 274 48 0 chr5 123958685 123958769 -75671381 + L1MC4 LINE L1 6616 6703 -1339 305 333 0 0 chr5 123958695 123958785 -75671365 - L1MC4 LINE L1 -1339 6703 6614 * 200 246 14 0 chr5 123958785 123958854 -75671296 + (TA)n Simple_repeat Simple_repeat 2 71 0 608 204 23 0 chr5 123958865 123959041 -75671109 + (TA)n Simple_repeat Simple_repeat 1 180 0 476 158 13 67 chr5 123958998 123959373 -75670777 + (TATATG)n Simple_repeat Simple_repeat 1 354 0 * 228 271 0 24 chr5 123959373 123959458 -75670692 + L1MC4 LINE L1 6617 6699 -1343 225 197 42 0 chr5 123959462 123959533 -75670617 + (TA)n Simple_repeat Simple_repeat 2 75 0 2965 150 19 4 chr5 123959536 123960237 -75669913 - L1P5 LINE L1 -364 5792 5081 258 56 0 0 chr5 123960705 123960741 -75669409 + (TC)n Simple_repeat Simple_repeat 1 36 0 1054 200 0 20 chr5 123961772 123961972 -75668178 + AluJo SINE Alu 87 282 -30 315 195 59 8 chr5 123961974 123962092 -75668058 + (TA)n Simple_repeat Simple_repeat 1 124 0 276 53 0 0 chr5 123964671 123964709 -75665441 + (CA)n Simple_repeat Simple_repeat 1 38 0 194 0 0 37 chr5 123964711 123964738 -75665412 + (TTTTC)n Simple_repeat Simple_repeat 2 27 0 2089 91 50 0 chr5 123964742 123965040 -75665110 - AluSp SINE Alu 0 313 1 461 250 60 0 chr5 123966362 123966462 -75663688 + Tigger3(Golem) DNA MER2_type 3 108 -2921 * 3410 138 78 38 chr5 123966453 123967171 -75662979 + Tigger3(Golem) DNA MER2_type 2278 3024 -5 194 62 31 0 chr5 123967177 123967209 -75662941 + (CA)n Simple_repeat Simple_repeat 2 34 0 240 300 118 18 chr5 123967217 123967387 -75662763 - L1MC4 LINE L1 -26 8016 7830 42123 37 21 1 chr5 123967441 123973470 -75656680 + L1PA2 LINE L1 4 6152 -3 38 0 0 0 chr5 123973470 123973508 -75656642 + AT_rich Low_complexity Low_complexity 1 38 0 481 262 77 13 chr5 123973522 123973927 -75656223 - L1ME1 LINE L1 -48 6116 5660 * 1903 235 51 65 chr5 123973911 123974729 -75655421 - L1ME1 LINE L1 -2636 3510 2704 * 1917 244 77 21 chr5 123974726 123976021 -75654129 - L1ME2 LINE L1 -226 6174 4797 308 232 110 12 chr5 123976030 123976112 -75654038 + MLT1H1 LTR MaLR 1 90 -465 404 199 19 19 chr5 123976238 123976343 -75653807 - L1ME2 LINE L1 -2051 4331 4227 1867 239 94 4 chr5 123976344 123976801 -75653349 + MLT1D LTR MaLR 8 505 0 1465 281 104 9 chr5 123976854 123977537 -75652613 - L1M4 LINE L1 -2022 4124 3377 418 165 66 0 chr5 123977537 123977628 -75652522 - L1PA13 LINE L1 -1 6162 6066 1639 271 53 49 chr5 123977628 123977848 -75652302 - MLT1E LTR MaLR -83 510 292 2654 64 6 0 chr5 123977848 123978190 -75651960 - LTR14A LTR ERVK 0 344 1 1639 271 53 49 chr5 123978190 123978475 -75651675 - MLT1E LTR MaLR -301 292 3 696 279 81 73 chr5 123978611 123978862 -75651288 - L1ME2 LINE L1 -4410 2153 1906 1747 168 13 7 chr5 123978862 123979165 -75650985 - AluSx SINE Alu -7 305 1 696 279 81 73 chr5 123979165 123979817 -75650333 - L1ME2 LINE L1 -4657 1906 1141 1565 173 3 21 chr5 123979817 123980101 -75650049 - AluJo SINE Alu -16 296 18 696 279 81 73 chr5 123980101 123980454 -75649696 - L1ME2 LINE L1 -5422 1141 792 744 284 18 14 chr5 123980693 123980915 -75649235 + MER58A DNA MER1_type 1 223 -1 186 371 56 35 chr5 123981485 123981682 -75648468 + L2 LINE L2 2214 2414 -900 2019 212 70 8 chr5 123981749 123982220 -75647930 + MLT1D LTR MaLR 3 502 -3 402 57 0 0 chr5 123983488 123983541 -75646609 + (TG)n Simple_repeat Simple_repeat 1 53 0 200 268 223 13 chr5 123983884 123984041 -75646109 + MIR SINE MIR 41 230 -32 191 268 62 62 chr5 123984122 123984234 -75645916 - L2 LINE L2 -827 2487 2376 808 264 35 53 chr5 123984346 123984573 -75645577 + MIR SINE MIR 2 224 -38 297 0 0 0 chr5 123984698 123984731 -75645419 + (A)n Simple_repeat Simple_repeat 1 33 0 502 222 35 11 chr5 123986103 123986230 -75643920 + L1M4c LINE L1 1482 1719 -4663 21 36 0 0 chr5 123986595 123986623 -75643527 + AT_rich Low_complexity Low_complexity 1 28 0 204 388 86 9 chr5 123987945 123988061 -75642089 - MIR SINE MIR -116 146 22 1156 287 46 20 chr5 123988103 123988563 -75641587 + MER20B DNA MER1_type 30 501 -282 356 217 43 0 chr5 123988677 123988769 -75641381 + MER20B DNA MER1_type 521 616 -167 4694 187 39 16 chr5 123989298 123989436 -75640714 - L1MA9 LINE L1 -11 6301 6168 288 0 0 0 chr5 123989436 123989468 -75640682 + (TG)n Simple_repeat Simple_repeat 1 32 0 4694 187 39 16 chr5 123989468 123989817 -75640333 - L1MA9 LINE L1 -144 6168 5829 408 20 0 0 chr5 123989817 123989866 -75640284 + (CA)n Simple_repeat Simple_repeat 2 50 0 4694 187 39 16 chr5 123989866 123990787 -75639363 - L1MA9 LINE L1 -483 5829 4863 402 176 39 10 chr5 123990794 123990896 -75639254 - L1MA9 LINE L1 -1584 4562 4458 3427 198 72 69 chr5 123990912 123992254 -75637896 - L1MA9 LINE L1 -2173 3973 2629 1011 242 78 40 chr5 123992226 123992648 -75637502 - L1ME LINE L1 -467 5695 5258 * 426 243 0 0 chr5 123992698 123992801 -75637349 - L1PB4 LINE L1 -3 6153 6051 773 225 0 0 chr5 123992807 123992976 -75637174 + L1 LINE L1 4938 5106 -1040 1422 208 128 10 chr5 123993024 123993414 -75636736 + MER63B DNA MER1_type 1 436 0 663 239 70 37 chr5 123993497 123993740 -75636410 - L1ME3A LINE L1 -4 6166 5916 243 279 135 27 chr5 123993845 123993956 -75636194 - MER113 DNA MER1_type? -7 514 392 605 282 60 0 chr5 123993988 123994272 -75635878 - MER113 DNA MER1_type? -123 398 98 1906 162 0 0 chr5 123994575 123994877 -75635273 + AluSx SINE Alu 1 302 -10 184 281 61 37 chr5 123995903 123995985 -75634165 - L3 LINE CR1 -1125 452 369 29 60 0 0 chr5 123997281 123997331 -75632819 + AT_rich Low_complexity Low_complexity 1 50 0 234 105 0 0 chr5 123997746 123997784 -75632366 + (GA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr5 123997864 123997885 -75632265 + AT_rich Low_complexity Low_complexity 1 21 0 2224 118 0 3 chr5 123997885 123998199 -75631951 - AluSq SINE Alu 0 313 1 212 203 0 34 chr5 123999266 123999295 -75630855 + A-rich Low_complexity Low_complexity 4 32 -28 1809 89 0 15 chr5 123999295 123999554 -75630596 + AluY SINE Alu 57 311 0 212 203 0 34 chr5 123999554 123999583 -75630567 + A-rich Low_complexity Low_complexity 32 60 0 607 262 61 12 chr5 123999649 123999813 -75630337 + MER63A DNA MER1_type 39 210 0 2621 10 0 17 chr5 124000387 124000688 -75629462 + AluYa5 SINE Alu 1 296 -15 189 0 0 0 chr5 124002188 124002209 -75627941 + (A)n Simple_repeat Simple_repeat 1 21 0 425 277 34 20 chr5 124002339 124002487 -75627663 + MIR SINE MIR 83 232 -30 21 36 0 0 chr5 124003883 124003911 -75626239 + AT_rich Low_complexity Low_complexity 1 28 0 301 231 112 75 chr5 124003936 124004070 -75626080 + L2 LINE L2 3161 3299 -14 264 342 26 100 chr5 124004975 124005206 -75624944 - L2 LINE L2 -190 3082 2869 23 33 0 0 chr5 124005524 124005554 -75624596 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 124006494 124006515 -75623635 + AT_rich Low_complexity Low_complexity 1 21 0 1065 270 19 26 chr5 124007780 124008195 -75621955 - L1M4b LINE L1 -5221 1638 1227 470 17 17 0 chr5 124008288 124008347 -75621803 - L1P LINE L1 -2167 3979 3920 1922 14 0 0 chr5 124008347 124008566 -75621584 - L1P LINE L1 -1978 4168 3950 1465 12 0 0 chr5 124008565 124008733 -75621417 + L1PA3 LINE L1 4497 4664 -1482 * 7608 26 0 0 chr5 124008733 124009620 -75620530 + L1PA3 LINE L1 5261 6153 -2 22 35 0 0 chr5 124009692 124009721 -75620429 + AT_rich Low_complexity Low_complexity 1 29 0 32 43 0 0 chr5 124009792 124009838 -75620312 + AT_rich Low_complexity Low_complexity 1 46 0 243 241 11 23 chr5 124009867 124009954 -75620196 + (TA)n Simple_repeat Simple_repeat 2 87 0 372 318 8 0 chr5 124010406 124010535 -75619615 + MARNA DNA Mariner 283 412 -174 24 0 0 0 chr5 124011385 124011409 -75618741 + AT_rich Low_complexity Low_complexity 1 24 0 235 229 0 0 chr5 124012429 124012477 -75617673 - MIR SINE MIR -10 252 205 192 280 107 0 chr5 124012538 124012613 -75617537 - MIR SINE MIR -61 201 119 * 665 277 13 58 chr5 124012609 124012833 -75617317 - MIR SINE MIR -19 243 30 223 319 14 116 chr5 124012839 124012938 -75617212 - MIR SINE MIR -138 124 40 2148 84 0 18 chr5 124012938 124013252 -75616898 - AluY SINE Alu 0 309 1 223 319 14 116 chr5 124013252 124013289 -75616861 - MIR SINE MIR -222 40 1 324 332 181 5 chr5 124013373 124013566 -75616584 - MIR SINE MIR -6 256 30 592 311 89 39 chr5 124014310 124014759 -75615391 - LTR33 LTR ERVL -2 519 17 408 167 0 14 chr5 124014998 124015070 -75615080 + FRAM SINE Alu 31 101 -75 381 297 40 7 chr5 124015170 124015318 -75614832 - Charlie8 DNA MER1_type -2251 166 14 2301 74 0 3 chr5 124015926 124016211 -75613939 - AluSp SINE Alu -9 304 21 239 316 13 13 chr5 124016627 124016706 -75613444 - L2 LINE L2 0 3272 3194 327 338 45 90 chr5 124016767 124017101 -75613049 - L2 LINE L2 -8 3264 2946 367 293 41 48 chr5 124018081 124018228 -75611922 - MER96 DNA MER1_type? -29 146 1 320 326 0 0 chr5 124018579 124018665 -75611485 - L2 LINE L2 -1 3271 3186 764 229 43 26 chr5 124019100 124019331 -75610819 + MIR SINE MIR 14 248 -14 2636 192 22 12 chr5 124019487 124020065 -75610085 - L1MB4 LINE L1 -2 6178 5595 1588 174 57 8 chr5 124020065 124020408 -75609742 - MLT1A1 LTR MaLR -1 364 1 1456 168 43 56 chr5 124020408 124020531 -75609619 - L1MB4 LINE L1 -580 5600 5477 2023 111 28 0 chr5 124020531 124020819 -75609331 - AluSx SINE Alu -16 296 1 1456 168 43 56 chr5 124020819 124021189 -75608961 - L1MB4 LINE L1 -703 5477 5116 21 71 0 0 chr5 124021247 124021289 -75608861 + AT_rich Low_complexity Low_complexity 1 42 0 24 53 0 0 chr5 124021700 124021738 -75608412 + AT_rich Low_complexity Low_complexity 1 38 0 12963 157 33 8 chr5 124021763 124024122 -75606028 - Tigger1 DNA MER2_type 0 2418 2 203 294 0 0 chr5 124024442 124024493 -75605657 + L2 LINE L2 3258 3308 -5 271 285 125 56 chr5 124027162 124027306 -75602844 - MIR SINE MIR -108 154 1 804 214 33 0 chr5 124029427 124029609 -75600541 + L1M4 LINE L1 5171 5358 -788 378 204 0 11 chr5 124029622 124029715 -75600435 + L1MB8 LINE L1 6085 6176 -2 324 297 93 0 chr5 124030473 124030591 -75599559 + MIR SINE MIR 3 131 -131 595 250 47 29 chr5 124031016 124031188 -75598962 + MLT1E3 LTR MaLR 46 220 -404 228 229 0 0 chr5 124031388 124031436 -75598714 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 1009 305 88 0 chr5 124032718 124033046 -75597104 + L3b LINE CR1 1114 1470 -113 208 200 22 0 chr5 124033337 124033382 -75596768 + (TA)n Simple_repeat Simple_repeat 1 46 0 227 191 29 15 chr5 124033383 124033451 -75596699 - L1MCa LINE L1 -4363 2063 1995 227 284 29 10 chr5 124033451 124033553 -75596597 - L1MC4 LINE L1 -1339 6703 6600 282 179 0 0 chr5 124033554 124033610 -75596540 + (TATG)n Simple_repeat Simple_repeat 1 56 0 7163 165 37 13 chr5 124033972 124034823 -75595327 + L1MA4 LINE L1 3921 4750 -1550 189 74 0 0 chr5 124034823 124034850 -75595300 + (CA)n Simple_repeat Simple_repeat 2 28 0 7163 165 37 13 chr5 124034850 124036308 -75593842 + L1MA4 LINE L1 4750 6294 -6 21 82 0 0 chr5 124037985 124038034 -75592116 + AT_rich Low_complexity Low_complexity 1 49 0 21 82 0 0 chr5 124038676 124038725 -75591425 + AT_rich Low_complexity Low_complexity 1 49 0 189 107 0 0 chr5 124040316 124040344 -75589806 + (GAA)n Simple_repeat Simple_repeat 2 29 0 273 219 172 0 chr5 124040608 124040672 -75589478 + L2 LINE L2 3239 3313 0 1032 286 133 28 chr5 124040673 124041471 -75588679 + L1MC4a LINE L1 5307 6188 -1620 180 229 125 0 chr5 124041646 124041694 -75588456 - L2 LINE L2 -1887 1427 1374 23 0 0 0 chr5 124041773 124041796 -75588354 + AT_rich Low_complexity Low_complexity 1 23 0 406 337 106 36 chr5 124043379 124044241 -75585909 + L1PBb LINE L1 22 1205 -6004 1032 272 54 9 chr5 124044486 124045032 -75585118 + L1PBb LINE L1 1359 1928 -5280 881 118 7 18 chr5 124045032 124045182 -75584968 - THE1B LTR MaLR -237 127 1 5130 173 25 1 chr5 124045183 124046315 -75583835 + L1PB4 LINE L1 5005 6153 -3 29 70 0 0 chr5 124046435 124046492 -75583658 + AT_rich Low_complexity Low_complexity 1 57 0 946 212 22 0 chr5 124047122 124047306 -75582844 - MER5A DNA MER1_type -1 188 1 21 57 0 0 chr5 124048623 124048658 -75581492 + AT_rich Low_complexity Low_complexity 1 35 0 294 125 0 0 chr5 124048804 124048852 -75581298 + (GA)n Simple_repeat Simple_repeat 2 49 0 965 115 0 28 chr5 124048859 124049041 -75581109 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 21 36 0 0 chr5 124049298 124049326 -75580824 + AT_rich Low_complexity Low_complexity 1 28 0 284 289 33 0 chr5 124049513 124049603 -75580547 + CT-rich Low_complexity Low_complexity 3 95 0 243 0 0 0 chr5 124049753 124049780 -75580370 + (A)n Simple_repeat Simple_repeat 1 27 0 224 300 90 20 chr5 124052707 124052807 -75577343 - MIR3 SINE MIR -19 189 83 22 70 0 0 chr5 124053096 124053139 -75577011 + AT_rich Low_complexity Low_complexity 1 43 0 1039 294 15 81 chr5 124053569 124054103 -75576047 + L1MCc LINE L1 17 515 -5908 1612 258 122 69 chr5 124054513 124056226 -75573924 + L1MCc LINE L1 1207 3225 -3897 694 263 5 0 chr5 124056230 124056416 -75573734 + L1MCc LINE L1 3433 3619 -3322 201 78 20 39 chr5 124056416 124056467 -75573683 + (TA)n Simple_repeat Simple_repeat 1 50 0 824 268 73 16 chr5 124056469 124056895 -75573255 + L1MCc LINE L1 3619 4068 -2873 21 36 0 0 chr5 124056897 124056925 -75573225 + AT_rich Low_complexity Low_complexity 1 28 0 374 275 85 66 chr5 124059524 124059676 -75570474 + L1MC/D LINE L1 561 709 -5410 2064 87 0 17 chr5 124059676 124059988 -75570162 + AluY SINE Alu 1 307 0 374 275 85 66 chr5 124059988 124060375 -75569775 + L1MC/D LINE L1 709 1112 -5007 1074 206 0 31 chr5 124060468 124060696 -75569454 + AluJo SINE Alu 86 306 -6 299 214 14 0 chr5 124060697 124060767 -75569383 + L1MC/D LINE L1 4466 4536 -1593 467 250 117 26 chr5 124060845 124061109 -75569041 + L1ME3A LINE L1 5664 5951 -219 21 36 0 0 chr5 124061302 124061330 -75568820 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 124061363 124061385 -75568765 + AT_rich Low_complexity Low_complexity 1 22 0 2439 155 16 5 chr5 124062059 124062484 -75567666 - MSTB1 LTR MaLR -2 430 1 198 374 71 0 chr5 124063277 124063376 -75566774 + MIR SINE MIR 31 136 -72 330 311 34 47 chr5 124063484 124063632 -75566518 + MIR SINE MIR 117 262 0 183 333 0 18 chr5 124066797 124066854 -75563296 - L3 LINE CR1 -136 1441 1386 2229 119 0 0 chr5 124067215 124067527 -75562623 + AluSx SINE Alu 1 312 0 3043 171 18 28 chr5 124067805 124068414 -75561736 - MER6A DNA MER2_type 0 605 3 640 306 36 42 chr5 124068446 124068779 -75561371 - MLT1J LTR MaLR -109 402 72 531 232 19 52 chr5 124069063 124069259 -75560891 - L1ME LINE L1 -422 5699 5512 1626 263 61 6 chr5 124069271 124069761 -75560389 - L1MB7 LINE L1 -10 6174 5658 386 386 126 31 chr5 124070136 124070556 -75559594 - L2 LINE L2 -4 3268 2809 194 372 47 16 chr5 124070780 124070909 -75559241 + L2 LINE L2 3180 3312 -1 541 318 54 25 chr5 124071051 124071290 -75558860 - MIR SINE MIR -15 247 2 24 0 0 0 chr5 124071401 124071425 -75558725 + AT_rich Low_complexity Low_complexity 1 24 0 217 330 27 54 chr5 124071519 124071631 -75558519 - L2 LINE L2 -470 2844 2736 375 301 105 78 chr5 124072356 124072805 -75557345 + L1MC/D LINE L1 4648 5108 -1021 598 249 150 79 chr5 124072928 124073461 -75556689 + L1MC/D LINE L1 5237 5807 -1984 713 230 6 19 chr5 124073462 124073623 -75556527 + FRAM SINE Alu 1 159 -7 519 299 25 30 chr5 124074082 124074283 -75555867 - LTR33 LTR ERVL -7 514 315 285 179 51 26 chr5 124074635 124074713 -75555437 - LTR50 LTR ERVL -3 792 713 485 212 45 15 chr5 124075028 124075160 -75554990 - LTR41 LTR ERVL -635 138 3 414 288 8 0 chr5 124075200 124075332 -75554818 - MIR SINE MIR -12 250 118 1913 136 14 0 chr5 124075334 124075620 -75554530 - AluSx SINE Alu -22 290 1 321 345 70 12 chr5 124075857 124076028 -75554122 + L1M4c LINE L1 1472 1652 -4732 1537 266 159 35 chr5 124076034 124077272 -75552878 + L1M4c LINE L1 2707 4097 -2285 5013 194 46 14 chr5 124077300 124078450 -75551700 + L1MB3 LINE L1 649 1835 -4549 358 296 19 19 chr5 124078434 124078533 -75551617 + L1MB3 LINE L1 3591 3692 -2690 * 1472 214 7 7 chr5 124078533 124078828 -75551322 + AluJo SINE Alu 1 295 -17 358 296 19 19 chr5 124078828 124078890 -75551260 + L1MB3 LINE L1 3691 3752 -2630 310 134 98 0 chr5 124078881 124078963 -75551187 + L1MB3 LINE L1 4632 4721 -1661 * 2439 217 34 22 chr5 124078968 124080007 -75550143 + L1MB3 LINE L1 4870 5919 -500 881 234 19 0 chr5 124080108 124080322 -75549828 + L1MB3 LINE L1 6200 6417 -2 21 71 0 0 chr5 124080771 124080813 -75549337 + AT_rich Low_complexity Low_complexity 1 42 0 933 323 107 27 chr5 124083404 124084030 -75546120 + L2 LINE L2 1868 2543 -771 418 283 85 99 chr5 124084315 124084728 -75545422 - MLT1I LTR MaLR -2 407 1 24 0 0 0 chr5 124084875 124084899 -75545251 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr5 124088350 124088375 -75541775 + AT_rich Low_complexity Low_complexity 1 25 0 439 234 75 9 chr5 124088537 124088644 -75541506 - L2 LINE L2 -8 3305 3192 266 246 46 0 chr5 124089041 124089106 -75541044 - MIR3 SINE MIR -3 205 138 758 259 65 7 chr5 124089231 124089629 -75540521 + Charlie1b DNA MER1_type 2 503 -20 189 0 0 0 chr5 124090020 124090041 -75540109 + (CA)n Simple_repeat Simple_repeat 2 22 0 2075 135 0 3 chr5 124090083 124090394 -75539756 + AluSg SINE Alu 1 310 0 318 106 0 0 chr5 124090451 124090498 -75539652 + (TA)n Simple_repeat Simple_repeat 2 48 0 5430 112 7 27 chr5 124090602 124091478 -75538672 + L1PA13 LINE L1 5295 6152 -11 1931 136 7 10 chr5 124091478 124091773 -75538377 + AluSx SINE Alu 1 294 -18 23 0 0 0 chr5 124091773 124091796 -75538354 + AT_rich Low_complexity Low_complexity 1 23 0 4865 81 25 26 chr5 124091971 124092660 -75537490 + LTR12 LTR ERV1 1 688 0 207 332 45 20 chr5 124093737 124093838 -75536312 - MIR SINE MIR -39 169 64 364 298 137 19 chr5 124094832 124095004 -75535146 - MIR SINE MIR -38 224 34 2225 69 41 0 chr5 124095059 124095350 -75534800 + AluY SINE Alu 3 305 -6 24 0 0 0 chr5 124095543 124095567 -75534583 + AT_rich Low_complexity Low_complexity 1 24 0 333 324 94 48 chr5 124095776 124096470 -75533680 + HAL1b LINE L1 99 824 -524 229 281 9 9 chr5 124096996 124097110 -75533040 + (TA)n Simple_repeat Simple_repeat 1 114 0 2141 169 3 5 chr5 124097111 124097478 -75532672 + MER47A DNA MER2_type 1 366 0 255 61 0 0 chr5 124097505 124097538 -75532612 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1836 225 89 80 chr5 124097556 124098436 -75531714 + L1MC5 LINE L1 6636 7523 -438 1240 250 100 98 chr5 124098458 124099570 -75530580 + L1MCb LINE L1 10 1123 -4922 2082 141 0 0 chr5 124099584 124099881 -75530269 + AluSx SINE Alu 3 299 -13 885 221 16 35 chr5 124099898 124100156 -75529994 + L1MCb LINE L1 1202 1454 -5110 1021 179 68 28 chr5 124100157 124100408 -75529742 + L1MC3 LINE L1 7525 7785 0 435 299 66 19 chr5 124100401 124100779 -75529371 + L1MC5 LINE L1 7505 7900 -61 * 373 267 228 25 chr5 124106304 124106506 -75523644 - L3b LINE CR1 -92 1491 1249 199 283 0 0 chr5 124106749 124106795 -75523355 - L2 LINE L2 -9 3263 3218 1985 118 0 45 chr5 124107067 124107381 -75522769 + AluSc SINE Alu 1 300 -9 201 239 22 0 chr5 124109183 124109229 -75520921 + MIR SINE MIR 160 206 -56 2673 139 9 19 chr5 124109452 124109884 -75520266 - MSTA LTR MaLR 0 428 1 2203 232 49 105 chr5 124111437 124112302 -75517848 - L1M4 LINE L1 -5702 840 25 6401 195 179 25 chr5 124112371 124113787 -75516363 - MER52A LTR ERV1 -121 1634 1 1364 195 34 86 chr5 124114036 124114421 -75515729 - MLT1A1 LTR MaLR 0 365 1 29 0 0 0 chr5 124114450 124114479 -75515671 + AT_rich Low_complexity Low_complexity 1 29 0 191 355 246 9 chr5 124114795 124114905 -75515245 + L2 LINE L2 3137 3272 0 183 42 0 0 chr5 124115929 124115953 -75514197 + (TTA)n Simple_repeat Simple_repeat 1 24 0 4192 164 32 1 chr5 124116225 124116915 -75513235 + MER50 LTR ERV1 1 711 -23 2062 153 0 3 chr5 124117077 124117390 -75512760 - AluSx SINE Alu 0 312 1 283 247 10 41 chr5 124117756 124117811 -75512339 + GA-rich Low_complexity Low_complexity 4 56 -41 2047 143 51 28 chr5 124117811 124118167 -75511983 - THE1B LTR MaLR 0 364 1 283 247 10 41 chr5 124118167 124118208 -75511942 + GA-rich Low_complexity Low_complexity 56 97 0 205 290 37 37 chr5 124119337 124119444 -75510706 + MIR SINE MIR 73 179 -83 3935 120 26 73 chr5 124119473 124120197 -75509953 + LTR8 LTR ERV1 1 690 -1 23 54 0 0 chr5 124120207 124120244 -75509906 + AT_rich Low_complexity Low_complexity 1 37 0 2400 116 28 6 chr5 124121090 124121445 -75508705 - THE1B LTR MaLR -1 363 1 21 36 0 0 chr5 124123546 124123574 -75506576 + AT_rich Low_complexity Low_complexity 1 28 0 181 310 52 0 chr5 124124270 124124328 -75505822 + MIR SINE MIR 129 189 -73 2341 256 84 115 chr5 124124763 124125110 -75505040 + L1MEc LINE L1 1877 2233 -3982 717 176 0 8 chr5 124125110 124125235 -75504915 + FLAM_C SINE Alu 1 124 -9 2341 256 84 115 chr5 124125235 124126251 -75503899 + L1MEc LINE L1 2233 3279 -2936 870 246 70 0 chr5 124126251 124126450 -75503700 - MER58A DNA MER1_type -1 223 11 2341 256 84 115 chr5 124126450 124127900 -75502250 + L1MEc LINE L1 3279 4736 -1479 2115 142 0 0 chr5 124127900 124128203 -75501947 + AluSg SINE Alu 1 303 -7 2341 256 84 115 chr5 124128203 124128619 -75501531 + L1MEc LINE L1 4736 5163 -1052 246 32 0 0 chr5 124128646 124128677 -75501473 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1172 174 28 36 chr5 124128682 124128929 -75501221 - AluSx SINE Alu -37 275 31 274 119 0 51 chr5 124129080 124129139 -75501011 + L1M4 LINE L1 5121 5176 -970 2191 147 25 0 chr5 124129252 124129607 -75500543 - THE1B LTR MaLR 0 364 1 5264 117 9 13 chr5 124129607 124130386 -75499764 - THE1B-int LTR MaLR 0 1580 805 2141 103 0 3 chr5 124231505 124231814 -75398336 - AluY SINE Alu 0 308 1 908 241 4 43 chr5 124232290 124232522 -75397628 - MIR SINE MIR -6 256 34 1174 217 114 18 chr5 124232815 124233156 -75396994 + MLT1A2 LTR MaLR 1 374 0 456 318 124 14 chr5 124235342 124235559 -75394591 + MIR SINE MIR 6 246 -16 434 299 80 23 chr5 124235594 124235785 -75394365 - MIR3 SINE MIR -5 203 4 26 88 0 0 chr5 124236605 124236673 -75393477 + AT_rich Low_complexity Low_complexity 1 68 0 1035 258 56 4 chr5 124237368 124237636 -75392514 + L1MC4 LINE L1 6728 7009 -1033 6399 236 37 18 chr5 124237641 124239646 -75390504 + L1MC1 LINE L1 3191 5233 -913 1578 163 42 16 chr5 124239642 124239832 -75390318 + L1MC1 LINE L1 5826 6010 -323 * 6040 89 53 8 chr5 124239832 124241319 -75388831 - L1PA11 LINE L1 -1 6173 4622 1578 163 42 16 chr5 124241319 124241625 -75388525 + L1MC1 LINE L1 6010 6320 -13 1614 259 98 11 chr5 124241754 124242456 -75387694 + L1MC4 LINE L1 7131 7893 -149 374 309 83 47 chr5 124242710 124243431 -75386719 - L1M4 LINE L1 -1708 4438 3692 33 43 0 0 chr5 124244714 124244761 -75385389 + AT_rich Low_complexity Low_complexity 1 47 0 180 315 46 46 chr5 124244856 124244986 -75385164 - MIR SINE MIR -56 206 77 636 327 70 17 chr5 124245110 124245526 -75384624 + MLT1L LTR MaLR 90 527 -88 2403 65 3 7 chr5 124245653 124245960 -75384190 - AluY SINE Alu -5 306 1 22 0 0 0 chr5 124246221 124246243 -75383907 + AT_rich Low_complexity Low_complexity 1 22 0 390 331 109 43 chr5 124247092 124247439 -75382711 - HAL1b LINE L1 -925 423 54 6810 56 8 12 chr5 124247460 124248048 -75382102 - L1P LINE L1 -1233 4913 4329 2145 101 0 16 chr5 124248048 124248356 -75381794 - AluSg SINE Alu -7 303 1 6810 56 8 12 chr5 124248356 124248683 -75381467 - L1P LINE L1 -1817 4329 4002 2496 161 20 16 chr5 124248683 124249136 -75381014 - Tigger1 DNA MER2_type -1962 456 2 13499 31 1 0 chr5 124249749 124251374 -75378776 - L1PA3 LINE L1 -1233 4913 3288 7452 28 12 0 chr5 124251374 124252590 -75377560 + L1PA3 LINE L1 4925 6152 -3 364 360 116 45 chr5 124252955 124253339 -75376811 + HAL1 LINE L1 1 443 -2064 3261 159 36 58 chr5 124253339 124253508 -75376642 - LTR8A LTR ERV1 0 727 556 1911 167 0 0 chr5 124253508 124253790 -75376360 - AluSx SINE Alu -28 284 3 3261 159 36 58 chr5 124253790 124254363 -75375787 - LTR8A LTR ERV1 -171 556 1 364 360 116 45 chr5 124254363 124254562 -75375588 + HAL1 LINE L1 443 626 -1881 1674 216 28 15 chr5 124254588 124254981 -75375169 + MER67D LTR ERV1 1 398 -116 3886 164 26 10 chr5 124254981 124255680 -75374470 + MER50 LTR ERV1 1 710 -24 3367 158 30 25 chr5 124255763 124256372 -75373778 - LTR9 LTR ERV1 0 612 1 263 239 30 0 chr5 124256502 124256569 -75373581 + HAL1 LINE L1 804 872 -1635 207 337 0 0 chr5 124256876 124256959 -75373191 + GA-rich Low_complexity Low_complexity 2 84 0 232 257 88 35 chr5 124256978 124257149 -75373001 + L1M4 LINE L1 2144 2323 -3823 321 297 81 14 chr5 124257205 124257552 -75372598 - L1MEd LINE L1 -3522 2607 2238 2389 142 35 21 chr5 124257853 124258275 -75371875 + MSTA LTR MaLR 1 428 0 233 0 62 0 chr5 124258451 124258483 -75371667 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 216 122 0 0 chr5 124258684 124258725 -75371425 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2070 121 0 0 chr5 124258730 124259019 -75371131 - AluSx SINE Alu -20 292 4 382 285 18 42 chr5 124259140 124259305 -75370845 - L1MEd LINE L1 -5937 182 22 26 64 0 0 chr5 124259328 124259375 -75370775 + AT_rich Low_complexity Low_complexity 1 47 0 17652 28 3 1 chr5 124259711 124261873 -75368277 - L1P LINE L1 -1543 4603 2437 7382 38 1 0 chr5 124261873 124262766 -75367384 + L1PA4 LINE L1 5255 6152 -3 269 316 9 9 chr5 124263381 124263495 -75366655 + MLT1H LTR MaLR 35 148 -401 5901 154 37 2 chr5 124264219 124265481 -75364669 + L1MA4A LINE L1 4998 6296 -7 2841 6 0 0 chr5 124265887 124266198 -75363952 - AluY SINE Alu 0 311 1 729 204 19 0 chr5 124266242 124266404 -75363746 + L1 LINE L1 5118 5282 -864 653 181 8 8 chr5 124266400 124266533 -75363617 + L1 LINE L1 5150 5282 -864 * 267 103 0 0 chr5 124266879 124266918 -75363232 + (A)n Simple_repeat Simple_repeat 1 39 0 437 236 133 44 chr5 124267885 124268239 -75361911 - L1MEc LINE L1 -3739 2806 2460 660 214 82 51 chr5 124268263 124268459 -75361691 - L1MD2 LINE L1 -238 6121 5920 1139 141 52 0 chr5 124268499 124268690 -75361460 - MLT1B LTR MaLR 0 390 190 719 161 66 0 chr5 124268718 124268855 -75361295 - L1MEc LINE L1 -6358 182 37 291 304 94 33 chr5 124269123 124269896 -75360254 - L1M4c LINE L1 -4616 1780 954 441 0 0 0 chr5 124270766 124270815 -75359335 + (TA)n Simple_repeat Simple_repeat 1 49 0 197 298 35 0 chr5 124271383 124271440 -75358710 - L2 LINE L2 -17 3296 3238 936 129 10 129 chr5 124274095 124274297 -75355853 - AluSx SINE Alu -8 304 127 5691 17 6 1 chr5 124274299 124274961 -75355189 - L1PA2 LINE L1 0 6155 5491 4401 19 3 0 chr5 124274962 124275580 -75354570 + L1PA2 LINE L1 4868 5486 -669 917 141 0 0 chr5 124275580 124275715 -75354435 - AluSx SINE Alu -177 135 1 27 0 0 0 chr5 124275739 124275766 -75354384 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr5 124278499 124278521 -75351629 + AT_rich Low_complexity Low_complexity 1 22 0 387 0 0 0 chr5 124279107 124279150 -75351000 + (TG)n Simple_repeat Simple_repeat 2 44 0 2050 126 0 0 chr5 124279652 124279946 -75350204 + AluSq SINE Alu 18 311 -2 1362 225 78 42 chr5 124281348 124281909 -75348241 + MLT1E3 LTR MaLR 2 624 0 439 275 52 72 chr5 124282053 124282246 -75347904 + MIR SINE MIR 14 202 -60 228 284 49 0 chr5 124282261 124282342 -75347808 + MIR SINE MIR 178 262 0 315 200 0 15 chr5 124282496 124282561 -75347589 + MLT1B LTR MaLR 1 64 -403 1131 196 42 106 chr5 124282581 124282968 -75347182 + MLT1B LTR MaLR 28 374 0 253 234 0 0 chr5 124282991 124283055 -75347095 + LTR33 LTR ERVL 19 82 -439 204 253 60 12 chr5 124283458 124283541 -75346609 + L2 LINE L2 2147 2233 -1081 527 324 43 82 chr5 124283844 124283900 -75346250 + L2 LINE L2 2890 2947 -366 1367 227 12 102 chr5 124283900 124284469 -75345681 + MLT2B1 LTR ERVL 2 519 -1 527 324 43 82 chr5 124284469 124284851 -75345299 + L2 LINE L2 2947 3311 -2 245 307 127 70 chr5 124284855 124285099 -75345051 - L2 LINE L2 -173 3099 2842 264 214 18 0 chr5 124285233 124285289 -75344861 + Charlie1 DNA MER1_type 1 57 -2704 404 219 67 9 chr5 124285396 124285501 -75344649 + Charlie1 DNA MER1_type 2651 2761 0 613 200 32 8 chr5 124285712 124285837 -75344313 - FLAM_C SINE Alu -14 129 2 375 78 0 0 chr5 124285900 124285951 -75344199 + (CA)n Simple_repeat Simple_repeat 1 51 0 248 299 104 0 chr5 124288354 124288431 -75341719 - L2 LINE L2 -19 3294 3210 1956 125 0 21 chr5 124288635 124288922 -75341228 - AluSg SINE Alu -18 292 12 190 205 26 0 chr5 124290559 124290598 -75339552 - L2 LINE L2 -4 3268 3229 1507 129 30 4 chr5 124291042 124291275 -75338875 - AluSg/x SINE Alu -3 309 71 1209 290 120 19 chr5 124291487 124292177 -75337973 + L1MC4a LINE L1 5511 6270 -1538 1141 162 72 4 chr5 124292221 124292456 -75337694 + L1MB3 LINE L1 5931 6181 -2 500 133 18 26 chr5 124292473 124292586 -75337564 + GA-rich Low_complexity Low_complexity 2 113 0 2663 265 64 49 chr5 124292684 124293820 -75336330 + L1MC4 LINE L1 6354 7506 -536 552 268 110 13 chr5 124293885 124294202 -75335948 - L1M4 LINE L1 -852 5294 4947 202 400 106 19 chr5 124294202 124294467 -75335683 - L2 LINE L2 -2987 327 40 808 252 28 23 chr5 124295721 124295939 -75334211 - MLT1E2 LTR MaLR 0 626 408 2516 94 3 19 chr5 124295939 124296300 -75333850 + THE1A LTR MaLR 1 355 0 3703 100 8 2 chr5 124296300 124296831 -75333319 + THE1A-int LTR MaLR 1 534 -1046 972 65 16 0 chr5 124296831 124296955 -75333195 + THE1A LTR MaLR 229 354 -1 498 323 32 21 chr5 124296957 124297146 -75333004 - MLT1E2 LTR MaLR -209 415 225 392 224 147 17 chr5 124297191 124297307 -75332843 - MLT1E2 LTR MaLR -523 131 1 2385 120 13 0 chr5 124298090 124298466 -75331684 - L1MA5A LINE L1 0 6297 5917 757 266 118 56 chr5 124298589 124299071 -75331079 - MLT1F1 LTR MaLR -6 561 50 23 0 0 0 chr5 124299372 124299395 -75330755 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 124299470 124299495 -75330655 + AT_rich Low_complexity Low_complexity 1 25 0 8942 183 103 15 chr5 124301265 124303463 -75326687 + L1M4c LINE L1 246 2626 -3756 1804 155 0 0 chr5 124307043 124307321 -75322829 + AluSx SINE Alu 26 303 -9 26 30 0 0 chr5 124307931 124307964 -75322186 + AT_rich Low_complexity Low_complexity 1 33 0 290 324 97 0 chr5 124308639 124308784 -75321366 + MIR SINE MIR 91 249 -13 274 289 33 11 chr5 124308905 124308995 -75321155 + (CGTG)n Simple_repeat Simple_repeat 4 95 0 22 0 0 0 chr5 124310840 124310862 -75319288 + AT_rich Low_complexity Low_complexity 1 22 0 2000 122 7 3 chr5 124310862 124311149 -75319001 - AluSx SINE Alu -24 288 1 371 283 41 14 chr5 124311907 124312052 -75318098 + L1ME LINE L1 5515 5663 -458 574 160 0 0 chr5 124312086 124312186 -75317964 + AluSg/x SINE Alu 211 310 0 382 296 48 32 chr5 124312552 124312738 -75317412 - MIR SINE MIR 0 262 74 626 281 43 47 chr5 124313947 124314203 -75315947 - MIR SINE MIR -5 257 3 206 338 14 14 chr5 124314560 124314631 -75315519 + MIR SINE MIR 29 99 -163 365 364 45 17 chr5 124314691 124314867 -75315283 + MER5A DNA MER1_type 9 189 0 985 187 0 67 chr5 124315147 124315356 -75314794 - AluJb SINE Alu -38 274 80 4267 178 52 20 chr5 124315357 124315420 -75314730 - L1MA3 LINE L1 -52 7672 7612 1948 211 60 2 chr5 124315420 124315823 -75314327 - MSTA LTR MaLR -2 426 1 8405 165 64 18 chr5 124315823 124317402 -75312748 - MSTA-int LTR MaLR 0 1651 1 2053 179 83 2 chr5 124317402 124317798 -75312352 - MSTA LTR MaLR 0 428 1 4267 178 52 20 chr5 124317798 124318633 -75311517 - L1MA3 LINE L1 -111 7613 6743 1011 189 47 24 chr5 124318639 124318851 -75311299 - AluJo SINE Alu -11 301 85 12036 197 50 37 chr5 124318853 124322259 -75307891 - L1MA3 LINE L1 -819 6746 3306 207 0 0 0 chr5 124322360 124322383 -75307767 + (TA)n Simple_repeat Simple_repeat 2 24 0 2109 107 0 14 chr5 124322385 124322675 -75307475 - AluSx SINE Alu -26 286 1 431 350 37 37 chr5 124323052 124323349 -75306801 - L1MEc LINE L1 -6083 313 17 928 88 15 22 chr5 124323460 124323596 -75306554 + AluSg/x SINE Alu 176 310 -2 1572 166 33 27 chr5 124323597 124323934 -75306216 + L1MB3 LINE L1 5760 6098 -85 181 352 213 9 chr5 124324284 124324500 -75305650 + L3b LINE CR1 1254 1513 -70 1059 90 12 30 chr5 124324916 124325083 -75305067 + L1PA13 LINE L1 5997 6160 -3 25 0 0 0 chr5 124325083 124325108 -75305042 + AT_rich Low_complexity Low_complexity 1 25 0 424 251 54 79 chr5 124325562 124325765 -75304385 + LTR33A LTR ERVL 13 210 -313 2016 136 3 10 chr5 124325994 124326296 -75303854 + AluSx SINE Alu 1 300 -12 322 308 38 38 chr5 124326420 124326553 -75303597 + L2 LINE L2 3179 3311 -2 398 35 0 18 chr5 124326764 124326821 -75303329 + (TA)n Simple_repeat Simple_repeat 2 57 0 1830 156 6 13 chr5 124326822 124327137 -75303013 - AluSq SINE Alu 0 313 1 2182 119 0 0 chr5 124328104 124328399 -75301751 - AluSg1 SINE Alu -8 301 7 789 281 106 26 chr5 124328857 124329206 -75300944 - LTR16A LTR ERVL 0 457 81 2352 107 0 0 chr5 124329389 124329698 -75300452 + AluSg SINE Alu 1 309 -1 322 362 57 24 chr5 124330197 124330407 -75299743 + MIR SINE MIR 46 262 0 323 68 0 0 chr5 124330674 124330718 -75299432 - U5 snRNA snRNA -72 44 1 423 220 69 129 chr5 124331309 124331541 -75298609 - LTR67 LTR ERVL 0 557 340 411 279 27 9 chr5 124332324 124332435 -75297715 + L2 LINE L2 3200 3312 -1 481 253 215 58 chr5 124333059 124333435 -75296715 - MLT1F1 LTR MaLR -2 565 131 430 300 30 93 chr5 124333435 124333705 -75296445 - MLT1F1-int LTR MaLR -95 1276 1024 248 0 31 0 chr5 124334167 124334199 -75295951 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 662 297 69 14 chr5 124334300 124334590 -75295560 - MLT1F1-int LTR MaLR -777 594 289 281 218 91 4 chr5 124334614 124334745 -75295405 - MLT1F1-int LTR MaLR -1221 150 2 799 196 26 37 chr5 124334757 124334946 -75295204 - MLT1F1 LTR MaLR -11 556 370 479 279 111 41 chr5 124334968 124335212 -75294938 - MLT1F1 LTR MaLR -281 261 1 2297 106 3 0 chr5 124335262 124335564 -75294586 + AluSx SINE Alu 1 303 -9 2052 124 47 14 chr5 124336112 124336475 -75293675 + THE1C LTR MaLR 1 375 0 912 275 94 39 chr5 124336966 124337432 -75292718 + MLT1H1 LTR MaLR 64 555 0 7620 27 0 2 chr5 124338408 124339675 -75290475 - L1PA2 LINE L1 0 6155 4890 24 0 0 0 chr5 124340012 124340036 -75290114 + AT_rich Low_complexity Low_complexity 1 24 0 351 302 47 0 chr5 124340722 124340828 -75289322 - L2 LINE L2 0 3313 3203 1504 181 26 57 chr5 124340828 124341215 -75288935 + THE1C LTR MaLR 1 375 0 2212 97 0 36 chr5 124341352 124341661 -75288489 + AluSq SINE Alu 1 298 -15 503 157 29 0 chr5 124341698 124341800 -75288350 - L1MA9 LINE L1 -38 6274 6170 195 352 106 27 chr5 124341860 124342116 -75288034 + L2 LINE L2 2468 2743 -571 976 39 0 32 chr5 124342181 124342336 -75287814 + (CCTAT)n Simple_repeat Simple_repeat 3 152 0 207 186 0 0 chr5 124342336 124342379 -75287771 + (TCCA)n Simple_repeat Simple_repeat 3 45 0 210 363 20 10 chr5 124342565 124342667 -75287483 + L2 LINE L2 2866 2968 -304 415 291 31 24 chr5 124342767 124342894 -75287256 - MIR SINE MIR -90 172 45 200 183 95 88 chr5 124343106 124343211 -75286939 + MIR SINE MIR 45 149 -113 781 219 29 29 chr5 124343984 124344189 -75285961 + MER3 DNA MER1_type 5 209 0 2230 91 30 0 chr5 124344724 124345022 -75285128 - AluSc SINE Alu -2 307 1 329 348 88 44 chr5 124346406 124346633 -75283517 + L3 LINE CR1 1339 1575 -2 234 264 0 22 chr5 124348950 124349041 -75281109 + L1MC4 LINE L1 6615 6703 -1339 * 281 234 0 43 chr5 124349013 124349107 -75281043 - L1MC4 LINE L1 -1339 6703 6614 1764 129 91 0 chr5 124349132 124349396 -75280754 - AluSx SINE Alu -24 288 1 3235 152 24 27 chr5 124350251 124350889 -75279261 + L1MC2 LINE L1 5693 6328 -16 21 0 0 0 chr5 124351413 124351434 -75278716 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 124352163 124352192 -75277958 + AT_rich Low_complexity Low_complexity 1 29 0 1114 288 64 22 chr5 124352306 124352855 -75277295 + L1ME1 LINE L1 26 597 -5826 393 276 32 69 chr5 124352917 124353134 -75277016 + L1ME1 LINE L1 820 1028 -5395 1381 263 29 22 chr5 124353181 124353728 -75276422 + L1ME1 LINE L1 5061 5611 -1330 2372 250 90 13 chr5 124353730 124354776 -75275374 + L1ME1 LINE L1 5834 6953 -8 432 294 78 73 chr5 124355215 124355559 -75274591 - MARNA DNA Mariner -157 429 84 200 31 62 0 chr5 124356194 124356226 -75273924 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 191 280 97 54 chr5 124356229 124356322 -75273828 - L2 LINE L2 -10 3303 3207 351 314 75 5 chr5 124357304 124357435 -75272715 + MIR SINE MIR 8 144 -64 364 310 23 23 chr5 124357706 124357835 -75272315 + MLT1J1 LTR MaLR 34 162 -284 180 77 0 0 chr5 124358132 124358158 -75271992 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1329 288 136 56 chr5 124358158 124359324 -75270826 + L2 LINE L2 2049 3313 0 457 352 94 21 chr5 124359499 124359871 -75270279 - L2 LINE L2 -458 2856 2458 213 393 101 7 chr5 124360660 124360958 -75269192 - L2 LINE L2 -1234 2080 1755 387 0 0 0 chr5 124361257 124361300 -75268850 + (TA)n Simple_repeat Simple_repeat 1 43 0 703 269 67 36 chr5 124362645 124362868 -75267282 + L1MEc LINE L1 121 350 -6046 256 158 12 134 chr5 124363189 124363271 -75266879 + MLT1D LTR MaLR 424 495 -10 252 217 28 183 chr5 124363337 124363517 -75266633 + L2 LINE L2 3162 3313 0 766 270 37 33 chr5 124363712 124363927 -75266223 - L1MEc LINE L1 -6048 348 133 2028 132 0 26 chr5 124363958 124364261 -75265889 + AluSq SINE Alu 1 295 -18 228 265 0 0 chr5 124366877 124366926 -75263224 + CT-rich Low_complexity Low_complexity 2 50 0 370 338 13 13 chr5 124367730 124367881 -75262269 + MIR3 SINE MIR 39 189 -19 2643 246 61 48 chr5 124367932 124368892 -75261258 - L1ME1 LINE L1 -5 6161 5192 1873 275 56 80 chr5 124368870 124369880 -75260270 - L1M4 LINE L1 -802 5344 4359 * 2930 208 39 4 chr5 124369914 124371093 -75259057 - L1MB8 LINE L1 -229 5949 4737 426 278 57 31 chr5 124371102 124371296 -75258854 - L1M4 LINE L1 -1850 4296 4098 708 314 65 8 chr5 124371623 124371871 -75258279 + MIR SINE MIR 1 262 0 309 26 0 0 chr5 124373252 124373290 -75256860 + (TG)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr5 124375209 124375231 -75254919 + AT_rich Low_complexity Low_complexity 1 22 0 241 352 70 26 chr5 124375535 124375762 -75254388 + L2 LINE L2 2465 2701 -613 182 341 32 92 chr5 124375874 124376003 -75254147 + L2 LINE L2 2835 2947 -325 2017 144 7 0 chr5 124376003 124376308 -75253842 - AluSx SINE Alu -5 307 1 182 341 32 92 chr5 124376308 124376395 -75253755 + L2 LINE L2 2947 3038 -234 249 288 15 0 chr5 124376752 124376818 -75253332 + MIR SINE MIR 196 262 0 894 205 37 11 chr5 124378165 124378355 -75251795 + MLT1A1 LTR MaLR 1 195 -170 4504 189 28 28 chr5 124378355 124379369 -75250781 + L1MA9 LINE L1 5261 6274 -38 624 287 88 82 chr5 124379587 124380472 -75249678 + L1M4 LINE L1 4298 5208 -938 2044 230 42 65 chr5 124381051 124381668 -75248482 + MER77 LTR ERV1 1 603 -2 474 68 34 11 chr5 124381834 124381922 -75248228 + (TCTA)n Simple_repeat Simple_repeat 1 90 0 252 311 61 66 chr5 124382167 124382379 -75247771 + MIR SINE MIR 6 216 -46 741 219 0 0 chr5 124382791 124382928 -75247222 - FLAM_C SINE Alu -6 137 1 229 200 0 20 chr5 124384372 124384422 -75245728 + CT-rich Low_complexity Low_complexity 3 51 0 287 176 0 15 chr5 124384422 124384490 -75245660 + C-rich Low_complexity Low_complexity 5 71 0 498 341 103 13 chr5 124385346 124385730 -75244420 + MLT1J1 LTR MaLR 1 375 -71 1303 170 59 28 chr5 124385803 124386091 -75244059 + L1MC/D LINE L1 5463 5759 -585 271 104 164 45 chr5 124386126 124386193 -75243957 + L1MC2 LINE L1 5715 5789 -544 321 146 55 0 chr5 124386232 124386287 -75243863 + L1MC2 LINE L1 5775 5832 -512 1262 135 16 48 chr5 124386292 124386544 -75243606 + L1MA4A LINE L1 4355 4598 -1548 * 2854 162 48 10 chr5 124386536 124387403 -75242747 + L1MA4A LINE L1 4930 5828 -475 1280 206 11 39 chr5 124387413 124387699 -75242451 + AluJo SINE Alu 11 288 -24 2386 158 38 6 chr5 124387699 124388174 -75241976 + L1MA4A LINE L1 5814 6303 0 2153 189 43 19 chr5 124388215 124388729 -75241421 + L1MC2 LINE L1 5816 6341 -3 2431 51 0 0 chr5 124388729 124389022 -75241128 - AluY SINE Alu -18 293 1 4961 110 23 57 chr5 124389265 124390710 -75239440 + pTR5 LTR ERV1 743 2438 0 228 348 56 0 chr5 124390971 124391060 -75239090 - MIR SINE MIR -148 114 21 296 254 0 15 chr5 124392174 124392241 -75237909 + GA-rich Low_complexity Low_complexity 3 68 0 4361 56 13 0 chr5 124394263 124394813 -75235337 + L1PA7 LINE L1 5460 6016 -138 188 318 30 0 chr5 124396361 124396427 -75233723 + MIR3 SINE MIR 130 197 -11 476 328 53 15 chr5 124399634 124399896 -75230254 + Charlie8 DNA MER1_type 3 274 -2143 281 230 173 12 chr5 124400380 124400452 -75229698 + L1ME1 LINE L1 1144 1203 -5443 1318 207 32 45 chr5 124400452 124400766 -75229384 + AluJo SINE Alu 1 310 -2 281 230 173 12 chr5 124400766 124400959 -75229191 + L1ME1 LINE L1 1203 1563 -5083 227 278 239 17 chr5 124401096 124401272 -75228878 + L1ME1 LINE L1 2292 2506 -4319 38 93 0 0 chr5 124401276 124401384 -75228766 + AT_rich Low_complexity Low_complexity 1 108 0 1801 231 101 57 chr5 124401394 124402432 -75227718 + L1ME1 LINE L1 2602 3652 -2992 515 262 38 66 chr5 124402567 124402750 -75227400 - MIR SINE MIR -68 194 17 380 256 80 16 chr5 124403091 124403216 -75226934 + L1ME1 LINE L1 3689 3821 -2823 1265 265 32 0 chr5 124403221 124403599 -75226551 + L1ME1 LINE L1 4954 5343 -1301 366 241 8 30 chr5 124403603 124403736 -75226414 + (TA)n Simple_repeat Simple_repeat 1 130 0 267 31 0 0 chr5 124403750 124403782 -75226368 + (TG)n Simple_repeat Simple_repeat 1 32 0 2613 239 86 36 chr5 124403794 124405067 -75225083 + L1ME1 LINE L1 5335 6660 -4 430 275 11 26 chr5 124405084 124405273 -75224877 + L1M4 LINE L1 2429 2614 -3532 238 289 62 0 chr5 124405253 124405350 -75224800 + L1ME2 LINE L1 6037 6139 -25 * 22 0 0 0 chr5 124405884 124405906 -75224244 + AT_rich Low_complexity Low_complexity 1 22 0 253 269 154 19 chr5 124406011 124406115 -75224035 - L2 LINE L2 -37 3276 3159 457 259 76 21 chr5 124407008 124407270 -75222880 - LTR41 LTR ERVL 0 766 459 733 229 23 23 chr5 124407379 124407554 -75222596 - LTR41 LTR ERVL -594 179 5 552 310 109 60 chr5 124407781 124408031 -75222119 + HAL1 LINE L1 1863 2099 -408 1901 195 59 66 chr5 124408031 124408589 -75221561 + MLT2B3 LTR ERVL 1 554 0 552 310 109 60 chr5 124408589 124408951 -75221199 + HAL1 LINE L1 2099 2505 -2 1618 243 110 23 chr5 124409789 124410727 -75219423 + MER69 DNA AcHobo 9 2481 -45 342 335 47 12 chr5 124411603 124411773 -75218377 + HAL1b LINE L1 278 453 -895 2120 110 0 7 chr5 124411908 124412200 -75217950 - AluSx SINE Alu -22 290 1 575 262 128 35 chr5 124412329 124412695 -75217455 + HAL1b LINE L1 760 1159 -189 1192 279 137 18 chr5 124412803 124413358 -75216792 - L1ME3A LINE L1 -41 6129 5509 21 71 0 0 chr5 124413909 124413951 -75216199 + AT_rich Low_complexity Low_complexity 1 42 0 5093 170 26 16 chr5 124414042 124415100 -75215050 - L1MA8 LINE L1 -6 6285 5217 12078 225 38 49 chr5 124415273 124417374 -75212776 - L1PA16 LINE L1 -1 6868 4744 333 68 0 0 chr5 124417374 124417418 -75212732 + (TTCA)n Simple_repeat Simple_repeat 3 46 0 2112 125 0 0 chr5 124417421 124417710 -75212440 - AluSg SINE Alu -21 289 1 12078 225 38 49 chr5 124417710 124420604 -75209546 - L1PA16 LINE L1 -2127 4742 1924 778 230 21 58 chr5 124421271 124421462 -75208688 + MER5A DNA MER1_type 1 184 -5 359 273 57 11 chr5 124421480 124421568 -75208582 + L2 LINE L2 3189 3280 -33 463 350 31 10 chr5 124421619 124421813 -75208337 - MIR SINE MIR 0 262 65 528 234 529 3 chr5 124423784 124424079 -75206071 + MLT1E1 LTR MaLR 31 480 -174 346 293 224 5 chr5 124424654 124424859 -75205291 + L3 LINE CR1 1239 1488 -89 265 318 0 0 chr5 124424912 124424978 -75205172 + L2 LINE L2 3248 3313 0 384 303 30 30 chr5 124426515 124426647 -75203503 + LTR16A LTR ERVL 151 282 -168 270 81 0 0 chr5 124427266 124427303 -75202847 + (TG)n Simple_repeat Simple_repeat 2 38 0 229 220 40 30 chr5 124427318 124427418 -75202732 - L1MC4 LINE L1 -1323 6719 6619 316 198 22 33 chr5 124427421 124427512 -75202638 - L1MC4 LINE L1 -1339 6703 6614 263 96 11 64 chr5 124427518 124427612 -75202538 + (TA)n Simple_repeat Simple_repeat 2 90 0 1307 226 56 46 chr5 124427617 124428010 -75202140 + L1MC4 LINE L1 6614 7010 -1032 821 288 24 16 chr5 124428320 124428570 -75201580 + MERVL LTR ERVL 4084 4335 -1150 571 299 20 63 chr5 124429206 124429394 -75200756 - MIR SINE MIR 0 262 86 701 261 27 0 chr5 124429394 124429578 -75200572 - MER5A DNA MER1_type 0 189 1 571 299 20 63 chr5 124429578 124429643 -75200507 - MIR SINE MIR -176 86 20 1045 211 51 94 chr5 124430849 124431317 -75198833 + LTR37B LTR ERV1 18 465 -3 243 286 104 55 chr5 124432017 124432199 -75197951 - L2 LINE L2 -128 3185 2995 3688 144 42 66 chr5 124432207 124433011 -75197139 + LTR1 LTR ERV1 1 785 0 539 229 53 35 chr5 124433374 124433544 -75196606 - MER5B DNA MER1_type -3 175 3 2048 135 140 11 chr5 124433800 124434179 -75195971 - MSTA LTR MaLR 0 428 1 551 348 26 7 chr5 124434189 124434499 -75195651 - HAL1 LINE L1 -695 1812 1497 455 315 94 58 chr5 124434511 124435009 -75195141 - HAL1 LINE L1 -1291 1216 701 245 138 35 17 chr5 124435186 124435244 -75194906 - HAL1 LINE L1 -2138 369 311 2274 108 0 0 chr5 124435851 124436157 -75193993 - AluSg SINE Alu -4 306 1 288 257 50 0 chr5 124436795 124436896 -75193254 + MIR SINE MIR 123 228 -34 218 243 71 29 chr5 124437556 124437626 -75192524 + MER5A DNA MER1_type 112 184 -5 530 286 46 15 chr5 124438449 124438645 -75191505 + MER58A DNA MER1_type 18 219 -5 435 268 159 23 chr5 124438650 124438805 -75191345 + MLT1K LTR MaLR 337 532 -56 197 62 0 31 chr5 124438805 124438837 -75191313 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 435 268 159 23 chr5 124438837 124438901 -75191249 + MLT1K LTR MaLR 532 586 -2 225 329 76 0 chr5 124439288 124439367 -75190783 + L2 LINE L2 3227 3311 -2 2028 206 24 71 chr5 124440186 124440765 -75189385 - MLT2B3 LTR ERVL 0 554 3 424 239 0 0 chr5 124440908 124441021 -75189129 + L1PB4 LINE L1 6044 6156 0 1709 262 49 30 chr5 124441021 124441552 -75188598 - MLT1E LTR MaLR -38 555 15 1723 173 18 0 chr5 124441836 124442113 -75188037 + MER1B DNA MER1_type 1 282 -57 692 349 78 28 chr5 124442177 124442857 -75187293 + L2 LINE L2 1798 2511 -803 1769 209 45 57 chr5 124442976 124443484 -75186666 + MLT1D LTR MaLR 4 505 0 2120 229 104 36 chr5 124443865 124444171 -75185979 + L1MC4a LINE L1 1824 2108 -4318 2093 125 0 0 chr5 124444171 124444460 -75185690 + AluSx SINE Alu 11 299 -13 2120 229 104 36 chr5 124444460 124445397 -75184753 + L1MC4a LINE L1 2108 3163 -3263 2605 115 3 0 chr5 124445397 124445771 -75184379 + THE1C LTR MaLR 1 375 0 2120 229 104 36 chr5 124445771 124445836 -75184314 + L1MC4a LINE L1 3163 3222 -3204 2246 173 8 10 chr5 124445847 124446246 -75183904 + MER57A LTR ERV1 1 398 -5 2771 235 105 78 chr5 124446257 124446804 -75183346 + L1MC4a LINE L1 3229 3760 -2666 364 232 73 0 chr5 124446804 124446886 -75183264 + AluJ/FLAM SINE Alu 1 88 -214 2771 235 105 78 chr5 124446886 124447757 -75182393 + L1MC4a LINE L1 3760 4768 -1658 1286 137 0 31 chr5 124498045 124498271 -75131879 + L1PA13 LINE L1 5941 6159 -4 299 228 0 43 chr5 124498343 124498435 -75131715 + (TG)n Simple_repeat Simple_repeat 2 89 0 963 305 91 51 chr5 124500091 124500757 -75129393 + L2 LINE L2 2620 3313 0 706 297 115 43 chr5 124501158 124501602 -75128548 + L2 LINE L2 2543 3057 -256 2120 133 0 9 chr5 124501602 124501917 -75128233 - AluSx SINE Alu 0 312 1 706 297 115 43 chr5 124501917 124502018 -75128132 + L2 LINE L2 3057 3149 -164 213 121 0 0 chr5 124503667 124503700 -75126450 + (CA)n Simple_repeat Simple_repeat 1 33 0 283 335 64 46 chr5 124506474 124506692 -75123458 + MIR SINE MIR 36 257 -5 291 71 0 0 chr5 124506864 124506906 -75123244 + (TG)n Simple_repeat Simple_repeat 2 43 0 251 337 20 0 chr5 124507229 124507330 -75122820 - L2 LINE L2 -56 3257 3155 250 322 44 11 chr5 124507321 124507411 -75122739 + MIR3 SINE MIR 70 162 -46 * 232 282 55 24 chr5 124507453 124507708 -75122442 + L1MC4a LINE L1 5259 5521 -905 500 309 37 48 chr5 124507831 124508264 -75121886 + L1MC4a LINE L1 5690 6117 -1971 23 33 0 0 chr5 124508275 124508305 -75121845 + AT_rich Low_complexity Low_complexity 1 30 0 3173 32 0 0 chr5 124508305 124508684 -75121466 - L1PA5 LINE L1 -13 6141 5763 407 0 0 0 chr5 124508685 124508732 -75121418 + L1PA5 LINE L1 5730 5776 -379 23 0 0 0 chr5 124508732 124508755 -75121395 + AT_rich Low_complexity Low_complexity 1 23 0 303 28 0 0 chr5 124508769 124508805 -75121345 + (TG)n Simple_repeat Simple_repeat 2 37 0 526 274 66 74 chr5 124509309 124509703 -75120447 + L1MC/D LINE L1 5356 5746 -2062 864 269 121 29 chr5 124509927 124510273 -75119877 + LTR16A1 LTR ERVL 8 385 -72 389 363 48 16 chr5 124510486 124510737 -75119413 + HERV16 LTR ERVL 716 974 -4022 23 0 0 0 chr5 124510751 124510774 -75119376 + AT_rich Low_complexity Low_complexity 1 23 0 428 341 120 42 chr5 124510996 124511280 -75118870 + HERV16 LTR ERVL 1267 1572 -3424 330 352 50 60 chr5 124511794 124512095 -75118055 + L2 LINE L2 2595 2892 -422 232 242 45 15 chr5 124512544 124512610 -75117540 + L2 LINE L2 3201 3268 -4 608 218 92 50 chr5 124512872 124513175 -75116975 - L1MC5 LINE L1 -35 7926 7611 1234 193 38 100 chr5 124513890 124514289 -75115861 + MLT1A2 LTR MaLR 1 374 0 271 319 78 21 chr5 124514461 124514602 -75115548 + MIR3 SINE MIR 32 180 -28 216 277 128 0 chr5 124515390 124515484 -75114666 - MIR SINE MIR -75 187 82 223 356 14 14 chr5 124515590 124515663 -75114487 - L2 LINE L2 -4 3268 3196 192 77 0 0 chr5 124516661 124516687 -75113463 + (CA)n Simple_repeat Simple_repeat 2 27 0 3540 62 0 0 chr5 124516692 124517145 -75113005 - L1PA5 LINE L1 -3 6151 5699 348 24 0 0 chr5 124517145 124517186 -75112964 + (CA)n Simple_repeat Simple_repeat 2 42 0 11099 212 61 13 chr5 124517412 124521010 -75109140 + L1MA4A LINE L1 223 3996 -2852 5630 181 75 29 chr5 124521003 124523302 -75106848 + L1MA4A LINE L1 4584 6999 -6 * 252 285 15 80 chr5 124525246 124525383 -75104767 - MER20 DNA MER1_type -91 128 1 2143 127 0 10 chr5 124525470 124525777 -75104373 + AluSg SINE Alu 1 304 -6 345 325 50 22 chr5 124526400 124526757 -75103393 + L1MC5 LINE L1 4462 4828 -1318 1290 258 102 83 chr5 124527209 124529722 -75100428 + L1MC5 LINE L1 5344 7907 -54 387 0 0 0 chr5 124530396 124530439 -75099711 + (TG)n Simple_repeat Simple_repeat 2 44 0 21 57 0 0 chr5 124532231 124532266 -75097884 + AT_rich Low_complexity Low_complexity 1 35 0 236 257 0 71 chr5 124532927 124532997 -75097153 - Charlie8 DNA MER1_type -10 2407 2343 238 186 23 93 chr5 124533149 124533218 -75096932 - Charlie8 DNA MER1_type -180 161 98 1825 146 24 63 chr5 124533218 124533427 -75096723 - MLT1A1 LTR MaLR -2 363 173 1978 120 0 34 chr5 124533427 124533749 -75096401 - AluSg SINE Alu 0 312 1 1825 146 24 63 chr5 124533749 124533916 -75096234 - MLT1A1 LTR MaLR -192 173 1 238 186 23 93 chr5 124533916 124533932 -75096218 - Charlie8 DNA MER1_type -243 98 82 2558 121 13 0 chr5 124534137 124534525 -75095625 - L1PA13 LINE L1 0 6163 5771 2121 145 3 9 chr5 124534525 124534866 -75095284 - L1PA10 LINE L1 -16 6152 5810 222 128 0 0 chr5 124535232 124535271 -75094879 + (T)n Simple_repeat Simple_repeat 1 39 0 30 27 0 0 chr5 124536477 124536514 -75093636 + AT_rich Low_complexity Low_complexity 1 37 0 7357 44 0 2 chr5 124536671 124537666 -75092484 + L1PA5 LINE L1 5162 6154 0 329 250 161 0 chr5 124537668 124537780 -75092370 - MER104 DNA Tc2 -41 139 10 561 296 127 53 chr5 124538625 124539098 -75091052 + L2 LINE L2 2257 2764 -550 569 231 46 0 chr5 124539107 124539237 -75090913 + MIR SINE MIR 98 233 -29 347 342 160 4 chr5 124539296 124539577 -75090573 + L2 LINE L2 2810 3134 -179 531 253 76 0 chr5 124539643 124539801 -75090349 + MIR SINE MIR 74 243 -19 5485 210 71 38 chr5 124541853 124543915 -75086235 + L1MDa LINE L1 31 2394 -4146 1416 66 15 0 chr5 124543914 124544112 -75086038 - L1PA7 LINE L1 -677 5477 5277 * 5347 61 0 0 chr5 124544112 124544779 -75085371 + L1PA7 LINE L1 5479 6149 -5 5002 225 41 28 chr5 124544784 124546696 -75083454 + L1MDa LINE L1 2390 4324 -2216 1876 140 0 0 chr5 124547578 124547835 -75082315 - AluSx SINE Alu -55 257 1 200 320 184 7 chr5 124548273 124548420 -75081730 - L2 LINE L2 0 3313 3141 340 267 114 0 chr5 124548716 124548821 -75081329 - L2 LINE L2 -1 3312 3196 345 272 59 0 chr5 124551328 124551497 -75078653 - MER104 DNA MER2_type -1 179 1 1354 217 25 68 chr5 124551618 124552060 -75078090 - L1ME3A LINE L1 -9 6161 5739 10186 38 3 124 chr5 124552159 124553756 -75076394 + SVA Other Other 1 1386 0 444 143 0 0 chr5 124553794 124553878 -75076272 + (TC)n Simple_repeat Simple_repeat 1 84 0 858 201 34 54 chr5 124553885 124554089 -75076061 + MLT1B LTR MaLR 191 390 0 275 290 53 50 chr5 124554242 124554456 -75075694 - L2 LINE L2 -286 2986 2775 322 349 89 21 chr5 124554472 124554707 -75075443 - L2 LINE L2 -812 2502 2252 805 157 122 0 chr5 124554748 124554920 -75075230 - Charlie1 DNA MER1_type 0 2761 2569 1640 163 3 31 chr5 124555346 124555679 -75074471 + AluJo SINE Alu 2 326 0 398 264 33 0 chr5 124556105 124556196 -75073954 + MIR SINE MIR 90 183 -79 15949 209 42 27 chr5 124556510 124562147 -75068003 - L1PA15 LINE L1 -6 6810 1110 270 116 0 0 chr5 124563001 124563044 -75067106 + (CA)n Simple_repeat Simple_repeat 2 44 0 1576 145 87 48 chr5 124563054 124563412 -75066738 + THE1C LTR MaLR 2 373 -2 308 314 51 8 chr5 124563437 124563555 -75066595 - MIR SINE MIR -119 143 21 315 290 93 0 chr5 124565100 124565207 -75064943 - MIR SINE MIR -109 153 37 640 300 16 25 chr5 124568886 124569103 -75061047 - MIR SINE MIR -48 214 3 239 227 40 27 chr5 124569425 124569500 -75060650 + Charlie8 DNA MER1_type 131 206 -2211 879 299 91 8 chr5 124569716 124570067 -75060083 + MLT1I LTR MaLR 1 380 -29 206 125 0 25 chr5 124570226 124570266 -75059884 + (GGA)n Simple_repeat Simple_repeat 3 41 0 272 346 83 45 chr5 124570422 124570500 -75059650 - MIR3 SINE MIR -14 194 120 536 196 55 104 chr5 124570500 124570720 -75059430 + MER3 DNA MER1_type 1 209 0 272 346 83 45 chr5 124570720 124570797 -75059353 - MIR3 SINE MIR -88 120 33 197 250 236 2 chr5 124571366 124571521 -75058629 - MIR SINE MIR -15 247 24 221 402 37 6 chr5 124571533 124571697 -75058453 + MIR3 SINE MIR 3 171 -37 * 332 268 88 50 chr5 124571696 124571906 -75058244 + MIR SINE MIR 17 238 -24 1197 28 0 0 chr5 124572685 124572826 -75057324 + L1PA4 LINE L1 6009 6149 -6 3144 239 57 28 chr5 124572843 124574155 -75055995 + L1ME1 LINE L1 4589 5940 -226 2664 102 11 3 chr5 124574155 124574527 -75055623 + THE1C LTR MaLR 1 375 0 3144 239 57 28 chr5 124574527 124574756 -75055394 + L1ME1 LINE L1 5940 6161 -5 322 160 13 13 chr5 124574969 124575044 -75055106 + GA-rich Low_complexity Low_complexity 4 78 0 347 259 102 35 chr5 124575148 124575461 -75054689 + L1MC4a LINE L1 5546 5634 -487 343 336 0 0 chr5 124576008 124576112 -75054038 - MERVL LTR ERVL -876 4609 4506 1136 309 108 46 chr5 124576117 124577172 -75052978 - MERVL LTR ERVL -1179 4306 3199 218 175 50 0 chr5 124577537 124577617 -75052533 + (TA)n Simple_repeat Simple_repeat 1 84 0 213 189 0 68 chr5 124577658 124577732 -75052418 + (TATATG)n Simple_repeat Simple_repeat 6 74 0 23 92 0 0 chr5 124577851 124577916 -75052234 + AT_rich Low_complexity Low_complexity 1 65 0 23 54 0 0 chr5 124580045 124580082 -75050068 + AT_rich Low_complexity Low_complexity 1 37 0 1477 124 8 0 chr5 124580262 124580504 -75049646 - L1MA4A LINE L1 -5 6298 6055 1473 188 54 48 chr5 124580514 124580887 -75049263 + THE1C LTR MaLR 1 375 0 1271 200 5 15 chr5 124580890 124581276 -75048874 + THE1C-int LTR MaLR 4 499 -1152 * 2159 133 8 38 chr5 124581273 124581642 -75048508 + THE1C-int LTR MaLR 783 1140 -440 408 282 70 51 chr5 124581642 124581915 -75048235 - L1ME LINE L1 -463 5658 5381 329 331 74 28 chr5 124581919 124582245 -75047905 - L1ME LINE L1 -801 5345 5005 786 190 0 32 chr5 124582468 124582626 -75047524 + L1MB1 LINE L1 5740 5892 -297 8809 132 33 4 chr5 124582626 124584039 -75046111 + Tigger1 DNA MER2_type 337 1790 -628 5554 218 49 32 chr5 124584242 124585479 -75044671 - L1MC2 LINE L1 -8 6336 5122 2272 168 28 19 chr5 124585479 124585901 -75044249 - MSTB LTR MaLR 0 426 1 5554 218 49 32 chr5 124585901 124587421 -75042729 - L1MC2 LINE L1 -1222 5122 3545 1945 158 0 3 chr5 124587443 124587741 -75042409 - AluSx SINE Alu -13 299 3 398 325 99 74 chr5 124587816 124588262 -75041888 - HAL1 LINE L1 -795 1712 1256 427 336 36 0 chr5 124589710 124589847 -75040303 - L2 LINE L2 -2 3311 3170 684 233 20 0 chr5 124589865 124590015 -75040135 + MER58B DNA MER1_type 189 341 0 192 182 0 0 chr5 124590256 124590300 -75039850 + (CAATA)n Simple_repeat Simple_repeat 5 48 0 262 299 179 28 chr5 124590320 124590748 -75039402 - L2 LINE L2 -447 2867 2290 1885 132 0 42 chr5 124590926 124591236 -75038914 - AluSc SINE Alu -12 297 1 248 261 0 29 chr5 124592897 124592966 -75037184 + L1ME4a LINE L1 5979 6045 -76 781 187 5 70 chr5 124592969 124593156 -75036994 - AluSg/x SINE Alu -18 292 118 257 208 0 0 chr5 124593341 124593389 -75036761 + L1MC5 LINE L1 7853 7900 -61 2123 148 16 24 chr5 124593555 124593933 -75036217 - THE1C LTR MaLR 0 375 1 9758 113 35 37 chr5 124593933 124595516 -75034634 - THE1C-int LTR MaLR 0 1580 2 907 122 21 79 chr5 124595518 124595557 -75034593 - THE1C LTR MaLR -2 373 333 2207 105 6 26 chr5 124595557 124595870 -75034280 + AluSq SINE Alu 3 309 -4 907 122 21 79 chr5 124595870 124596019 -75034131 - THE1C LTR MaLR -42 333 196 2961 151 71 49 chr5 124596020 124596820 -75033330 + pTR5 LTR ERV1 753 2029 -409 324 161 37 37 chr5 124596820 124596901 -75033249 + LTR30 LTR ERV1 544 624 -98 1690 67 1 4 chr5 124596901 124597138 -75033012 + pTR5 LTR ERV1 52 390 -2048 1100 181 29 14 chr5 124597138 124597348 -75032802 - THE1C LTR MaLR -162 213 1 970 236 36 33 chr5 124597684 124597960 -75032190 - HAL1 LINE L1 -699 1808 1532 995 193 86 107 chr5 124597961 124598439 -75031711 - MER4C LTR ERV1 0 465 1 425 289 48 33 chr5 124598455 124598791 -75031359 - HAL1 LINE L1 -997 1510 1170 346 214 10 68 chr5 124598796 124598899 -75031251 - HAL1 LINE L1 -1393 1114 1018 3602 222 85 16 chr5 124598899 124599896 -75030254 - L1MD2 LINE L1 -2 6617 5552 1064 248 42 11 chr5 124599904 124600259 -75029891 - L1MD2 LINE L1 -994 5412 5047 3523 223 32 36 chr5 124600262 124601517 -75028633 - L1MD2 LINE L1 -5024 1385 20 462 269 82 5 chr5 124601545 124601764 -75028386 - HAL1 LINE L1 -1485 1022 787 467 301 115 44 chr5 124601938 124602277 -75027873 - HAL1 LINE L1 -2120 387 25 2236 132 51 35 chr5 124602746 124603043 -75027107 - L1MB4 LINE L1 -1 6179 5871 2347 94 0 7 chr5 124603043 124603350 -75026800 - AluY SINE Alu -6 305 1 2236 132 51 35 chr5 124603350 124603506 -75026644 - L1MB4 LINE L1 -309 5871 5719 402 232 123 0 chr5 124604108 124604246 -75025904 + LTR37A LTR ERV1 78 232 -194 29 0 0 0 chr5 124604246 124604275 -75025875 + AT_rich Low_complexity Low_complexity 1 29 0 1091 202 119 12 chr5 124604275 124604528 -75025622 - MLT1A1 LTR MaLR -85 280 1 515 136 18 9 chr5 124604916 124605026 -75025124 + LTR37A LTR ERV1 314 424 -2 245 286 22 104 chr5 124605153 124605335 -75024815 - MIR3 SINE MIR -3 205 39 35 24 0 0 chr5 124605681 124605723 -75024427 + AT_rich Low_complexity Low_complexity 1 42 0 221 295 33 0 chr5 124606205 124606266 -75023884 - L2 LINE L2 0 3272 3210 186 118 0 0 chr5 124606693 124606727 -75023423 + (TG)n Simple_repeat Simple_repeat 2 35 0 374 270 45 0 chr5 124606786 124606897 -75023253 + L2 LINE L2 3197 3312 -1 400 337 75 50 chr5 124607564 124608126 -75022024 - L2 LINE L2 -1 3312 2741 261 0 0 0 chr5 124608358 124608387 -75021763 + (T)n Simple_repeat Simple_repeat 1 29 0 210 143 0 0 chr5 124609686 124609721 -75020429 + (TCTCCC)n Simple_repeat Simple_repeat 3 37 0 180 316 51 113 chr5 124609854 124610031 -75020119 - L2 LINE L2 -1 3271 3106 229 284 227 11 chr5 124610601 124610777 -75019373 - MIR SINE MIR -21 241 28 214 228 35 0 chr5 124611308 124611365 -75018785 + (TATG)n Simple_repeat Simple_repeat 2 60 0 578 213 12 44 chr5 124611837 124611997 -75018153 + MER106B DNA MER1_type 896 1050 -9 24 0 0 0 chr5 124613282 124613306 -75016844 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 75 chr5 124615276 124615316 -75014834 + AT_rich Low_complexity Low_complexity 1 37 0 4507 132 27 5 chr5 124615644 124616395 -75013755 - L1MA4A LINE L1 -7 6296 5530 1025 198 43 32 chr5 124617005 124617283 -75012867 + L1MC2 LINE L1 6063 6343 -1 24 53 0 0 chr5 124617328 124617366 -75012784 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 124617438 124617468 -75012682 + AT_rich Low_complexity Low_complexity 1 30 0 2269 124 13 26 chr5 124617751 124618129 -75012021 - THE1C LTR MaLR -2 373 1 412 254 191 31 chr5 124618258 124618546 -75011604 - L1MC4a LINE L1 -1898 5910 5577 599 300 88 22 chr5 124620491 124620718 -75009432 - MIR SINE MIR -18 244 3 21 0 0 0 chr5 124622499 124622520 -75007630 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 124622983 124623014 -75007136 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr5 124624490 124624514 -75005636 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr5 124626091 124626114 -75004036 + (A)n Simple_repeat Simple_repeat 1 23 0 7753 19 0 0 chr5 124626357 124627381 -75002769 - L1PA2 LINE L1 -3 6152 5129 503 258 12 31 chr5 124628318 124628481 -75001669 + MER5C DNA MER1_type 1 160 -164 821 187 0 0 chr5 124628491 124628625 -75001525 + AluJo SINE Alu 1 134 -178 401 212 34 41 chr5 124628629 124628775 -75001375 + MER5C DNA MER1_type 180 324 0 1651 174 11 78 chr5 124629108 124629481 -75000669 + MER7A DNA MER2_type 1 346 0 198 0 0 0 chr5 124629846 124629868 -75000282 + (TG)n Simple_repeat Simple_repeat 2 23 0 249 190 0 17 chr5 124629870 124629928 -75000222 + L1MC4 LINE L1 6648 6704 -1338 2173 117 10 0 chr5 124631294 124631593 -74998557 + AluY SINE Alu 1 302 -9 253 344 113 53 chr5 124633515 124633666 -74996484 - MIR3 SINE MIR -30 178 19 2571 158 51 22 chr5 124634331 124634864 -74995286 + L1MB3 LINE L1 5634 6181 -2 298 311 19 0 chr5 124635796 124635902 -74994248 - MER110 LTR ERV1 -208 283 176 21 36 0 0 chr5 124636336 124636364 -74993786 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chr5 124636809 124636833 -74993317 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 338 231 37 18 chr5 124637013 124637455 -74992695 + (TA)n Simple_repeat Simple_repeat 1 450 0 21 36 0 0 chr5 124637756 124637784 -74992366 + AT_rich Low_complexity Low_complexity 1 28 0 376 275 95 1 chr5 124637921 124638072 -74992078 + MIR SINE MIR 29 188 -37 388 311 33 49 chr5 124638212 124638395 -74991755 - MIR3 SINE MIR -2 206 27 187 281 0 35 chr5 124638607 124638664 -74991486 - L2 LINE L2 -17 3255 3201 1983 127 3 17 chr5 124640078 124640378 -74989772 + AluSx SINE Alu 2 297 -15 23 33 0 0 chr5 124642419 124642449 -74987701 + AT_rich Low_complexity Low_complexity 1 30 0 556 312 168 27 chr5 124642896 124643069 -74987081 + L3 LINE CR1 1029 1176 -401 382 78 0 223 chr5 124643069 124643129 -74987021 - MADE1 DNA Mariner 0 80 51 1801 144 7 0 chr5 124643129 124643400 -74986750 + AluSx SINE Alu 19 291 -21 382 78 0 223 chr5 124643400 124643442 -74986708 - MADE1 DNA Mariner -29 51 1 556 312 168 27 chr5 124643442 124643672 -74986478 + L3 LINE CR1 1176 1489 -88 327 340 126 6 chr5 124644418 124644577 -74985573 + MER5B DNA MER1_type 1 178 0 205 148 19 56 chr5 124645318 124645372 -74984778 + T-rich Low_complexity Low_complexity 2 53 0 226 211 0 0 chr5 124646020 124646058 -74984092 + (TG)n Simple_repeat Simple_repeat 1 38 0 24 77 0 0 chr5 124646251 124646303 -74983847 + AT_rich Low_complexity Low_complexity 1 52 0 25 31 0 0 chr5 124646932 124646964 -74983186 + AT_rich Low_complexity Low_complexity 1 32 0 349 370 165 21 chr5 124649070 124649767 -74980383 - L2 LINE L2 -700 2614 1818 318 170 170 20 chr5 124651349 124651449 -74978701 - MER94 DNA DNA -19 115 1 270 81 0 0 chr5 124652187 124652224 -74977926 + (TA)n Simple_repeat Simple_repeat 1 37 0 3611 35 18 9 chr5 124652224 124652672 -74977478 - L1PA5 LINE L1 -5 6149 5695 1188 265 42 0 chr5 124653233 124653542 -74976608 + MER58B DNA MER1_type 20 341 0 29 60 0 0 chr5 124654064 124654114 -74976036 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 124654837 124654858 -74975292 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 124655147 124655172 -74974978 + AT_rich Low_complexity Low_complexity 1 25 0 708 221 86 0 chr5 124655625 124655765 -74974385 - FAM SINE Alu -27 158 7 3601 58 0 0 chr5 124655813 124656264 -74973886 - L1PA5 LINE L1 -3 6151 5701 394 59 0 0 chr5 124658750 124658801 -74971349 - MADE1 DNA Mariner -29 51 1 546 248 257 15 chr5 124659641 124659847 -74970303 - MIR SINE MIR 0 262 7 247 220 80 43 chr5 124659814 124659979 -74970171 + MIR SINE MIR 54 262 0 * 238 299 171 0 chr5 124660093 124660210 -74969940 - L2 LINE L2 -174 3139 3003 492 135 27 0 chr5 124660312 124660423 -74969727 + (TA)n Simple_repeat Simple_repeat 1 114 0 259 200 0 17 chr5 124660456 124660516 -74969634 + L1MC4 LINE L1 6661 6719 -1323 591 321 40 24 chr5 124660555 124660807 -74969343 - L2 LINE L2 -493 2821 2566 22 0 0 0 chr5 124661573 124661595 -74968555 + AT_rich Low_complexity Low_complexity 1 22 0 1170 259 100 3 chr5 124661638 124661946 -74968204 + MLT1A1 LTR MaLR 2 405 -23 558 262 11 16 chr5 124662211 124662394 -74967756 + HAL1 LINE L1 1060 1241 -1266 254 167 0 0 chr5 124862998 124863040 -74767110 - MLT1K LTR MaLR 0 588 547 198 0 0 0 chr5 124863200 124863222 -74766928 + (CTCTG)n Simple_repeat Simple_repeat 2 23 0 180 176 0 0 chr5 124863644 124863678 -74766472 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 2787 89 33 10 chr5 124863679 124864073 -74766077 - MLT2A1 LTR ERVL -41 403 1 1442 229 54 16 chr5 124864109 124864481 -74765669 - MLT1D LTR MaLR -29 476 91 433 188 0 54 chr5 124864482 124864855 -74765295 + (TA)n Simple_repeat Simple_repeat 1 352 0 469 188 0 67 chr5 124864890 124865440 -74764710 + (TA)n Simple_repeat Simple_repeat 1 513 0 235 111 0 63 chr5 124865532 124865595 -74764555 + L1MCa LINE L1 2006 2064 -4362 200 167 0 56 chr5 124865606 124865678 -74764472 + (TA)n Simple_repeat Simple_repeat 1 68 0 344 291 36 18 chr5 124865678 124865843 -74764307 + (TATG)n Simple_repeat Simple_repeat 2 169 0 504 278 94 11 chr5 124866222 124866402 -74763748 + MER91A DNA MER1_type 1 195 -1 260 291 13 0 chr5 124866440 124866519 -74763631 + L1ME LINE L1 5565 5644 -477 668 221 38 60 chr5 124867526 124867761 -74762389 + MER74A LTR ERVL 299 528 -30 2091 123 0 32 chr5 124867789 124868105 -74762045 + AluSq SINE Alu 1 306 -7 195 318 153 39 chr5 124869063 124869318 -74760832 - L2 LINE L2 -159 3113 2830 347 263 271 49 chr5 124869527 124869877 -74760273 - L2 LINE L2 -534 2780 2353 21 0 0 0 chr5 124871086 124871107 -74759043 + AT_rich Low_complexity Low_complexity 1 21 0 297 51 0 0 chr5 124871958 124871997 -74758153 + (TG)n Simple_repeat Simple_repeat 2 40 0 328 232 100 116 chr5 124872220 124872461 -74757689 + MIR SINE MIR 20 256 -6 226 255 29 0 chr5 124873654 124873756 -74756394 + (TA)n Simple_repeat Simple_repeat 2 106 0 205 176 0 0 chr5 124874493 124874527 -74755623 + L2 LINE L2 3224 3257 -15 690 196 168 29 chr5 124875154 124875327 -74754823 - MIR SINE MIR -64 198 2 363 250 135 0 chr5 124878068 124878164 -74751986 + MIR3 SINE MIR 78 186 -22 2207 116 3 0 chr5 124878786 124879079 -74751071 + AluSc SINE Alu 1 294 -15 1094 303 68 21 chr5 124879136 124879793 -74750357 - L1MC4a LINE L1 -1747 6061 5374 929 262 76 14 chr5 124879815 124880205 -74749945 + LTR16B LTR ERVL 2 462 -2 201 196 0 22 chr5 124881008 124881054 -74749096 + CT-rich Low_complexity Low_complexity 2 46 0 222 150 0 0 chr5 124881056 124881096 -74749054 + (TA)n Simple_repeat Simple_repeat 2 41 0 310 208 0 60 chr5 124881314 124881497 -74748653 + (TA)n Simple_repeat Simple_repeat 1 172 0 349 200 0 60 chr5 124881521 124881706 -74748444 + (TA)n Simple_repeat Simple_repeat 1 174 0 303 239 9 53 chr5 124881707 124881820 -74748330 + (TATG)n Simple_repeat Simple_repeat 1 108 0 276 179 0 82 chr5 124881821 124882016 -74748134 + (TA)n Simple_repeat Simple_repeat 1 179 0 464 188 0 56 chr5 124882081 124882463 -74747687 + (TA)n Simple_repeat Simple_repeat 1 360 0 319 209 11 48 chr5 124882500 124882687 -74747463 + (TA)n Simple_repeat Simple_repeat 1 180 0 411 221 37 22 chr5 124882688 124882824 -74747326 + (TATATG)n Simple_repeat Simple_repeat 3 140 0 361 187 22 50 chr5 124882835 124883017 -74747133 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 378 191 4 60 chr5 124883040 124883585 -74746565 + (TA)n Simple_repeat Simple_repeat 1 514 0 439 255 0 54 chr5 124883587 124883771 -74746379 + (TATG)n Simple_repeat Simple_repeat 3 176 0 439 255 0 54 chr5 124883791 124883975 -74746175 + (TATG)n Simple_repeat Simple_repeat 3 176 0 439 255 0 54 chr5 124883995 124884179 -74745971 + (TATG)n Simple_repeat Simple_repeat 3 176 0 506 191 5 88 chr5 124884199 124884393 -74745757 + (TATG)n Simple_repeat Simple_repeat 3 180 0 379 166 5 72 chr5 124884499 124884692 -74745458 + (TA)n Simple_repeat Simple_repeat 1 180 0 353 151 10 73 chr5 124884713 124884905 -74745245 + (TA)n Simple_repeat Simple_repeat 1 180 0 316 228 43 33 chr5 124884905 124884997 -74745153 + L1MC4 LINE L1 6613 6705 -1337 242 123 27 27 chr5 124884997 124885070 -74745080 + (TA)n Simple_repeat Simple_repeat 2 74 0 308 295 0 57 chr5 124885076 124885198 -74744952 + L1MC4 LINE L1 6589 6703 -1339 45 19 0 0 chr5 124885198 124885250 -74744900 + AT_rich Low_complexity Low_complexity 1 52 0 662 138 23 0 chr5 124885250 124885424 -74744726 + (TA)n Simple_repeat Simple_repeat 2 179 0 25 75 0 0 chr5 124885430 124885483 -74744667 + AT_rich Low_complexity Low_complexity 1 53 0 524 137 35 12 chr5 124885491 124885755 -74744395 + (TA)n Simple_repeat Simple_repeat 1 270 0 276 227 0 0 chr5 124885781 124885957 -74744193 + (TA)n Simple_repeat Simple_repeat 1 176 0 25 0 0 0 chr5 124885964 124885989 -74744161 + AT_rich Low_complexity Low_complexity 1 25 0 306 250 35 60 chr5 124885989 124886105 -74744045 + L1MC4 LINE L1 6613 6725 -1317 435 182 0 0 chr5 124886105 124886226 -74743924 + (TA)n Simple_repeat Simple_repeat 1 121 0 213 286 0 0 chr5 124886253 124886309 -74743841 + (CAT)n Simple_repeat Simple_repeat 1 56 0 182 342 108 17 chr5 124887450 124887570 -74742580 + MIR SINE MIR 12 142 -120 986 271 133 69 chr5 124887590 124888124 -74742026 - MLT1G LTR MaLR 0 590 10 229 307 24 63 chr5 124888438 124888565 -74741585 - MIR SINE MIR -65 197 76 492 253 114 34 chr5 124890078 124890315 -74739835 - MIR SINE MIR 0 262 7 306 230 105 66 chr5 124892351 124892503 -74737647 - L1ME4a LINE L1 -3 6118 5961 699 295 6 0 chr5 124892513 124892696 -74737454 + MIR SINE MIR 78 261 -1 298 179 0 18 chr5 124892788 124892844 -74737306 - MER5A DNA MER1_type -132 57 3 298 252 151 23 chr5 124893282 124893500 -74736650 - L1ME4a LINE L1 -177 5944 5699 252 258 133 58 chr5 124894342 124894462 -74735688 + MER5B DNA MER1_type 50 178 0 25 51 0 0 chr5 124895057 124895096 -74735054 + AT_rich Low_complexity Low_complexity 1 39 0 412 269 77 44 chr5 124895734 124895916 -74734234 + MLT1J2 LTR MaLR 263 450 0 264 324 84 49 chr5 124896606 124896748 -74733402 + MIR3 SINE MIR 32 178 -30 302 91 18 0 chr5 124897418 124897473 -74732677 + (CA)n Simple_repeat Simple_repeat 2 57 0 473 268 132 60 chr5 124901016 124901251 -74728899 - MIR SINE MIR 0 262 11 333 312 64 0 chr5 124902230 124902339 -74727811 - MIR3 SINE MIR -9 199 84 307 217 0 0 chr5 124902540 124902609 -74727541 + L1MC4 LINE L1 6641 6709 -1333 279 93 0 0 chr5 124903990 124904033 -74726117 + (TA)n Simple_repeat Simple_repeat 2 44 0 27 49 0 0 chr5 124904216 124904257 -74725893 + AT_rich Low_complexity Low_complexity 1 41 0 609 255 27 54 chr5 124904401 124904585 -74725565 - MER97a DNA MER1_type? -715 179 1 436 330 73 11 chr5 124904646 124904837 -74725313 - MARNA DNA Mariner -277 309 107 655 288 80 50 chr5 124904858 124905219 -74724931 - MLT1I LTR MaLR -35 374 3 233 273 18 45 chr5 124905219 124905321 -74724829 + MARNA DNA Mariner 479 577 -9 188 0 0 69 chr5 124905366 124905395 -74724755 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 1325 183 8 37 chr5 124905398 124905666 -74724484 - AluJb SINE Alu -52 260 1 441 247 126 42 chr5 124905803 124905993 -74724157 - MIR SINE MIR -32 230 25 313 242 40 89 chr5 124906093 124906217 -74723933 + L2 LINE L2 3193 3310 -3 390 85 0 0 chr5 124906688 124906747 -74723403 + (CA)n Simple_repeat Simple_repeat 2 60 0 358 83 95 0 chr5 124908558 124908619 -74721531 + MLT2A2 LTR ERVL 1 67 -377 24940 76 2 4 chr5 124908619 124911805 -74718345 + HERVL-A2 LTR ERVL 2475 5654 0 2091 164 59 24 chr5 124911805 124912317 -74717833 + MLT2A2 LTR ERVL 1 554 0 2510 85 0 0 chr5 124912338 124912645 -74717505 - AluSx SINE Alu -3 309 3 24 32 0 0 chr5 124912797 124912828 -74717322 + AT_rich Low_complexity Low_complexity 1 31 0 929 227 28 23 chr5 124912850 124913066 -74717084 - MER58 DNA MER1_type -124 217 1 244 262 83 12 chr5 124913128 124913212 -74716938 - MARNA DNA Mariner -390 196 107 186 303 141 10 chr5 124913249 124913348 -74716802 + L2 LINE L2 3199 3310 -3 224 224 17 17 chr5 124913964 124914022 -74716128 + CT-rich Low_complexity Low_complexity 2 59 0 381 43 0 0 chr5 124914028 124914075 -74716075 + (CA)n Simple_repeat Simple_repeat 2 48 0 362 304 30 15 chr5 124914546 124914681 -74715469 + L2 LINE L2 2614 2750 -564 357 265 87 27 chr5 124914746 124914931 -74715219 + LTR33 LTR ERVL 56 251 -270 259 336 85 29 chr5 124915092 124915340 -74714810 + L2 LINE L2 2790 3049 -223 1046 111 19 102 chr5 124915444 124915660 -74714490 - L1PA13 LINE L1 -8 6155 5958 874 271 165 28 chr5 124915809 124916103 -74714047 + L2 LINE L2 2818 3193 -120 405 86 0 0 chr5 124916103 124916161 -74713989 + (TA)n Simple_repeat Simple_repeat 2 59 0 874 271 165 28 chr5 124916161 124916302 -74713848 + L2 LINE L2 3193 3313 0 2308 125 45 8 chr5 124916977 124917353 -74712797 - MLT1B LTR MaLR 0 390 1 1408 232 40 42 chr5 124918305 124918878 -74711272 - Charlie2 DNA MER1_type -61 2801 2230 253 268 71 9 chr5 124918958 124919070 -74711080 - Charlie2 DNA MER1_type -2572 210 92 7532 36 0 1 chr5 124919875 124920775 -74709375 + L1PA5 LINE L1 5254 6152 -2 22 0 0 0 chr5 124922554 124922576 -74707574 + AT_rich Low_complexity Low_complexity 1 22 0 411 279 9 9 chr5 124923615 124923726 -74706424 - MIR SINE MIR -139 123 13 1649 232 48 28 chr5 124924154 124924649 -74705501 + MLT1D LTR MaLR 1 505 0 390 129 0 0 chr5 124924705 124924767 -74705383 + (TG)n Simple_repeat Simple_repeat 1 62 0 250 164 49 0 chr5 124924770 124924831 -74705319 + GA-rich Low_complexity Low_complexity 1 64 0 2541 68 0 0 chr5 124926360 124926671 -74703479 + AluY SINE Alu 1 311 0 266 247 59 0 chr5 124927761 124927846 -74702304 + MIR SINE MIR 37 126 -82 235 381 12 0 chr5 124928798 124928882 -74701268 + L2 LINE L2 3137 3221 -51 24 32 0 0 chr5 124928892 124928923 -74701227 + AT_rich Low_complexity Low_complexity 1 31 0 190 354 0 0 chr5 124929074 124929139 -74701011 - L2 LINE L2 -36 3236 3172 1484 136 1 0 chr5 124929146 124929409 -74700741 + L1PA12 LINE L1 5640 5904 -264 192 125 0 0 chr5 124929529 124929561 -74700589 + (TA)n Simple_repeat Simple_repeat 2 33 0 615 252 83 81 chr5 124930226 124930623 -74699527 - MLT1I LTR MaLR -11 398 1 235 217 36 36 chr5 124930632 124930715 -74699435 + CT-rich Low_complexity Low_complexity 4 86 0 180 0 0 0 chr5 124931293 124931313 -74698837 + (A)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr5 124931976 124932005 -74698145 + AT_rich Low_complexity Low_complexity 1 29 0 1669 167 0 38 chr5 124932005 124932330 -74697820 - AluJo SINE Alu 0 314 1 24 32 0 0 chr5 124932803 124932834 -74697316 + AT_rich Low_complexity Low_complexity 1 31 0 387 250 114 8 chr5 124935091 124935223 -74694927 - MER103 DNA DNA -2 164 19 2614 55 0 0 chr5 124935327 124935634 -74694516 + AluY SINE Alu 1 307 -4 197 200 50 33 chr5 124935837 124935897 -74694253 - MIR SINE MIR -47 215 155 244 321 0 0 chr5 124936173 124936229 -74693921 + MER119 DNA MER1_type 2 57 -526 762 170 21 43 chr5 124936230 124936418 -74693732 + MER119 DNA MER1_type 400 583 0 266 282 55 55 chr5 124937449 124937559 -74692591 - MIR3 SINE MIR -17 191 82 730 153 0 46 chr5 124937634 124937765 -74692385 - FLAM_C SINE Alu -18 125 1 307 254 0 14 chr5 124938484 124938555 -74691595 + MIR SINE MIR 193 262 0 904 293 41 8 chr5 124938634 124938880 -74691270 - MIR SINE MIR 0 262 9 23 54 0 0 chr5 124939053 124939090 -74691060 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr5 124939195 124939220 -74690930 + AT_rich Low_complexity Low_complexity 1 25 0 2381 99 0 10 chr5 124939517 124939830 -74690320 - AluSx SINE Alu 0 312 3 2100 90 0 4 chr5 124940411 124940689 -74689461 - AluSc SINE Alu -13 296 20 548 295 16 85 chr5 124941136 124941394 -74688756 + MIR SINE MIR 2 241 -21 22 35 0 0 chr5 124941713 124941742 -74688408 + AT_rich Low_complexity Low_complexity 1 29 0 195 69 0 0 chr5 124941884 124941913 -74688237 + (CAGCC)n Simple_repeat Simple_repeat 1 29 0 346 374 0 0 chr5 124942358 124942457 -74687693 - L2 LINE L2 -37 3235 3137 580 194 88 77 chr5 124942562 124942732 -74687418 + MER5B DNA MER1_type 7 178 0 334 282 92 66 chr5 124944960 124945187 -74684963 - MIR SINE MIR -10 252 20 10292 36 8 13 chr5 124948147 124949492 -74680658 - L1PA4 LINE L1 -855 5291 3953 7103 35 6 1 chr5 124949492 124950353 -74679797 + L1PA4 LINE L1 5289 6155 0 203 130 43 0 chr5 124950468 124950514 -74679636 + (TA)n Simple_repeat Simple_repeat 2 49 0 198 71 0 0 chr5 124950651 124950679 -74679471 + (TATG)n Simple_repeat Simple_repeat 2 29 0 420 20 0 0 chr5 124951283 124951332 -74678818 + (CA)n Simple_repeat Simple_repeat 1 49 0 22 88 0 0 chr5 124951918 124951975 -74678175 + AT_rich Low_complexity Low_complexity 1 57 0 445 319 62 75 chr5 124952584 124952764 -74677386 + L1 LINE L1 4233 4414 -1732 2167 115 0 10 chr5 124952764 124953076 -74677074 + AluSc SINE Alu 1 309 0 445 319 62 75 chr5 124953076 124953440 -74676710 + L1 LINE L1 4414 4770 -1376 25 51 0 0 chr5 124953516 124953555 -74676595 + AT_rich Low_complexity Low_complexity 1 39 0 220 113 40 48 chr5 124953581 124953705 -74676445 + (TA)n Simple_repeat Simple_repeat 1 123 0 602 217 28 17 chr5 124953712 124953892 -74676258 - MER33 DNA MER1_type -125 199 18 455 312 8 0 chr5 124954922 124955047 -74675103 - MIR SINE MIR -63 199 74 225 228 0 0 chr5 124956568 124956647 -74673503 + GA-rich Low_complexity Low_complexity 2 80 0 591 258 74 6 chr5 124956711 124956874 -74673276 - MIR SINE MIR -25 237 64 372 329 117 21 chr5 124957031 124957271 -74672879 + L2 LINE L2 2254 2516 -798 811 278 44 22 chr5 124957325 124957472 -74672678 + MIR SINE MIR 8 163 -99 3507 180 63 6 chr5 124957472 124958165 -74671985 - MER44D DNA MER2_type 0 605 1 811 278 44 22 chr5 124958165 124958244 -74671906 + MIR SINE MIR 163 239 -23 1985 133 36 36 chr5 124958640 124959002 -74671148 + THE1B LTR MaLR 1 362 -2 609 354 66 52 chr5 124959194 124959618 -74670532 + MER115 DNA AcHobo 1 430 -263 810 182 31 0 chr5 124959815 124959974 -74670176 + MER82 DNA MER2_type 1 164 -489 2726 143 109 8 chr5 124959991 124960219 -74669931 - L1MCa LINE L1 -4133 2293 2089 237 65 0 0 chr5 124960219 124960250 -74669900 + (TA)n Simple_repeat Simple_repeat 1 31 0 2726 143 109 8 chr5 124960250 124961050 -74669100 - L1MCa LINE L1 -4337 2089 1072 6104 154 13 13 chr5 124961051 124963262 -74666888 + L1MA3 LINE L1 4126 6305 0 2788 127 44 77 chr5 124963284 124963516 -74666634 - L1MCa LINE L1 -5338 1088 850 225 0 0 0 chr5 124963516 124963541 -74666609 + (TA)n Simple_repeat Simple_repeat 2 26 0 2788 127 44 77 chr5 124963541 124963882 -74666268 - L1MCa LINE L1 -5576 850 534 942 195 0 35 chr5 124963882 124964056 -74666094 - AluJo SINE Alu -139 173 6 1265 239 3 30 chr5 124964057 124964426 -74665724 + L1M4 LINE L1 4923 5281 -865 227 79 26 0 chr5 124964422 124964460 -74665690 + L1MC1 LINE L1 6266 6304 -29 * 12542 118 131 4 chr5 124964512 124966612 -74663538 + L1PA15 LINE L1 3 2369 -4494 12115 193 15 15 chr5 124966650 124968830 -74661320 + L1PA15 LINE L1 3322 5502 -1365 7709 25 0 0 chr5 124968830 124969871 -74660279 + L1PA4 LINE L1 5115 6155 0 12115 193 15 15 chr5 124969871 124970660 -74659490 + L1PA15 LINE L1 5502 6290 -577 2325 97 6 3 chr5 124970761 124971090 -74659060 + L1PB1 LINE L1 5815 6144 -7 1182 216 74 3 chr5 124971132 124971497 -74658653 + L1MCa LINE L1 2057 2447 -3979 * 2570 153 23 81 chr5 124971489 124971914 -74658236 + L1PA15 LINE L1 6389 6780 -101 2422 91 0 0 chr5 124971914 124972222 -74657928 + AluSp SINE Alu 4 311 -2 2570 153 23 81 chr5 124972222 124972318 -74657832 + L1PA15 LINE L1 6780 6880 -1 494 203 0 38 chr5 124972318 124972387 -74657763 + L1MCa LINE L1 2467 2530 -4077 2342 101 0 0 chr5 124972387 124972684 -74657466 + AluSg SINE Alu 1 297 -13 494 203 0 38 chr5 124972684 124972747 -74657403 + L1MCa LINE L1 2530 2594 -4013 677 331 134 8 chr5 124972748 124973172 -74656978 + L2 LINE L2 2741 3210 -103 212 200 44 11 chr5 124973178 124973268 -74656882 + (TA)n Simple_repeat Simple_repeat 2 94 0 285 257 14 0 chr5 124973277 124973347 -74656803 + L2 LINE L2 3201 3271 -1 236 292 31 0 chr5 124973355 124973420 -74656730 + L2 LINE L2 3227 3293 -20 325 196 0 0 chr5 124973650 124973706 -74656444 - MER63 DNA MER1_type -328 733 678 1531 204 107 85 chr5 124973934 124974428 -74655722 - MLT1D LTR MaLR 0 505 1 847 180 41 12 chr5 124974428 124974600 -74655550 + MER5B DNA MER1_type 2 178 0 3247 140 80 25 chr5 124975277 124975319 -74654831 - L1MA9 LINE L1 0 6312 6274 198 0 0 0 chr5 124975319 124975341 -74654809 + (TA)n Simple_repeat Simple_repeat 2 23 0 3247 140 80 25 chr5 124975341 124976006 -74654144 - L1MA9 LINE L1 -38 6274 5538 807 270 122 58 chr5 124976163 124976597 -74653553 + L2 LINE L2 2852 3313 0 348 24 0 0 chr5 124977343 124977384 -74652766 + (CA)n Simple_repeat Simple_repeat 1 41 0 180 0 0 0 chr5 124979599 124979619 -74650531 + (TTG)n Simple_repeat Simple_repeat 2 21 0 295 306 59 0 chr5 124980637 124980722 -74649428 - L2 LINE L2 -12 3260 3171 5627 156 60 26 chr5 124980863 124982245 -74647905 - L1MC1 LINE L1 -1 6612 5183 12540 182 26 9 chr5 124982250 124982962 -74647188 - L1MA7 LINE L1 -10 6281 5583 1884 122 165 27 chr5 124982962 124983338 -74646812 - MSTA LTR MaLR 0 428 1 8999 141 26 40 chr5 124983338 124984939 -74645211 - MSTA-int LTR MaLR 0 1580 3 1902 149 165 8 chr5 124984941 124985311 -74644839 - MSTA LTR MaLR 0 428 1 12540 182 26 9 chr5 124985311 124988127 -74642023 - L1MA7 LINE L1 -708 5583 2686 7817 221 70 53 chr5 124988127 124988582 -74641568 - L1MC1 LINE L1 -1227 5199 4753 246 81 0 0 chr5 124988582 124988619 -74641531 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 7817 221 70 53 chr5 124988619 124990861 -74639289 - L1MC1 LINE L1 -1673 4753 2550 5958 207 12 6 chr5 124990861 124991328 -74638822 + L1PA16 LINE L1 3942 4404 -1762 216 0 0 0 chr5 124991328 124991352 -74638798 + (CA)n Simple_repeat Simple_repeat 1 24 0 5958 207 12 6 chr5 124991352 124991654 -74638496 + L1PA16 LINE L1 4404 4702 -1464 2062 122 3 0 chr5 124991654 124991940 -74638210 + AluSx SINE Alu 21 307 -5 5958 207 12 6 chr5 124991940 124993386 -74636764 + L1PA16 LINE L1 4702 6155 -11 7817 221 70 53 chr5 124993386 124993863 -74636287 - L1MC1 LINE L1 -3876 2550 2082 2326 82 0 0 chr5 124993863 124994178 -74635972 + AluY SINE Alu 1 315 0 7817 221 70 53 chr5 124994178 124994731 -74635419 - L1MC1 LINE L1 -4344 2082 1397 332 91 0 0 chr5 124994731 124994786 -74635364 - L1MA1 LINE L1 0 6302 6248 7817 221 70 53 chr5 124994786 124995090 -74635060 - L1MC1 LINE L1 -5029 1397 1100 1539 202 86 29 chr5 124995093 124995721 -74634429 - L1M3 LINE L1 -470 5698 5042 13494 189 33 33 chr5 124995731 125000069 -74630081 - L1MA7 LINE L1 0 7710 3365 400 272 35 15 chr5 125000074 125000294 -74629856 + L1M2c LINE L1 1022 1182 -4146 * 1682 227 8 11 chr5 125000272 125000624 -74629526 - L1MA7 LINE L1 -6669 820 470 4774 173 36 13 chr5 125000643 125001591 -74628559 - L1M3 LINE L1 -1096 5050 4081 2925 230 53 94 chr5 125001597 125002774 -74627376 - L1MCb LINE L1 -4916 1129 1 308 186 0 81 chr5 125002774 125002860 -74627290 - L2 LINE L2 -549 2765 2687 4942 171 9 7 chr5 125003617 125004479 -74625671 - MER6 DNA MER2_type -1 864 1 333 309 48 8 chr5 125004676 125004802 -74625348 - MIR3 SINE MIR -1 207 77 3427 152 31 43 chr5 125006542 125007207 -74622943 - L1MB8 LINE L1 0 6178 5506 2037 130 3 0 chr5 125007207 125007529 -74622621 - AluSx SINE Alu 0 323 1 1691 119 0 4 chr5 125007538 125007774 -74622376 - AluY SINE Alu -22 289 55 3427 152 31 43 chr5 125007774 125007947 -74622203 - L1MB8 LINE L1 -680 5498 5149 254 26 53 0 chr5 125009021 125009059 -74621091 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 381 22 0 0 chr5 125009872 125009918 -74620232 + (CA)n Simple_repeat Simple_repeat 2 47 0 421 315 75 7 chr5 125010224 125010431 -74619719 + MIR SINE MIR 14 229 -33 198 298 0 0 chr5 125010730 125010777 -74619373 - L2 LINE L2 -9 3304 3258 199 297 74 78 chr5 125011859 125012291 -74617859 + L2 LINE L2 2671 3091 -181 236 309 73 57 chr5 125012386 125012509 -74617641 + L2 LINE L2 3148 3272 0 280 341 0 11 chr5 125012565 125012653 -74617497 - MIR3 SINE MIR -21 187 101 1654 170 0 37 chr5 125013193 125013493 -74616657 - AluJo SINE Alu -23 289 1 619 121 0 128 chr5 125064332 125064613 -74565537 - AluY SINE Alu -24 287 43 216 201 37 67 chr5 125072124 125072288 -74557862 + (CACAC)n Simple_repeat Simple_repeat 4 162 0 215 133 27 80 chr5 125072919 125072994 -74557156 + (CACAA)n Simple_repeat Simple_repeat 2 72 0 447 178 26 99 chr5 125076217 125076369 -74553781 - L1MB3 LINE L1 -226 5957 5817 1841 143 11 11 chr5 125076380 125076666 -74553484 - AluJb SINE Alu -8 304 19 3171 223 29 19 chr5 125076666 125077506 -74552644 - L1MB3 LINE L1 -842 5304 4457 457 258 73 0 chr5 125077655 125077779 -74552371 - MIR SINE MIR -128 134 2 1144 166 0 0 chr5 125078295 125078470 -74551680 - AluJo SINE Alu -1 311 137 756 217 70 95 chr5 125078533 125078895 -74551255 - MLT1A2 LTR MaLR -63 311 3 195 139 0 0 chr5 125079107 125079143 -74551007 + (TG)n Simple_repeat Simple_repeat 1 36 0 365 321 119 31 chr5 125079175 125079755 -74550395 + L1M4 LINE L1 3327 3957 -2189 252 294 12 35 chr5 125079943 125080113 -74550037 + (CATATA)n Simple_repeat Simple_repeat 2 167 0 355 227 0 34 chr5 125081249 125081337 -74548813 + L1MC3 LINE L1 7681 7765 -20 937 147 0 22 chr5 125081358 125081494 -74548656 - AluJo SINE Alu -169 133 1 6631 242 46 30 chr5 125081503 125081724 -74548426 - L1MB3 LINE L1 -1667 4479 4263 396 0 0 0 chr5 125081724 125081768 -74548382 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 6631 242 46 30 chr5 125081768 125082761 -74547389 - L1MB3 LINE L1 -1883 4263 3287 2085 158 17 68 chr5 125082761 125083172 -74546978 - MLT1B LTR MaLR 0 390 1 6631 242 46 30 chr5 125083172 125083316 -74546834 - L1MB3 LINE L1 -2859 3287 3147 604 182 124 25 chr5 125083316 125083437 -74546713 - AluJo SINE Alu -169 133 1 6631 242 46 30 chr5 125083437 125083448 -74546702 - L1MB3 LINE L1 -2999 3147 3138 246 32 0 0 chr5 125083448 125083479 -74546671 + (TTG)n Simple_repeat Simple_repeat 3 33 0 6631 242 46 30 chr5 125083479 125084227 -74545923 - L1MB3 LINE L1 -3008 3138 2322 1826 160 7 19 chr5 125084227 125084534 -74545616 - AluJb SINE Alu -9 303 1 6631 242 46 30 chr5 125084534 125084589 -74545561 - L1MB3 LINE L1 -3824 2322 2269 1511 143 26 124 chr5 125084581 125085001 -74545149 - L1MB8 LINE L1 0 6178 5800 * 349 206 33 11 chr5 125085000 125085092 -74545058 - L1MCb LINE L1 -5549 358 265 * 507 222 72 7 chr5 125085109 125085262 -74544888 - L1MCb LINE L1 -6256 170 8 2969 142 98 16 chr5 125085432 125085982 -74544168 - LTR49 LTR ERV1 0 595 1 3490 87 0 9 chr5 125085997 125086435 -74543715 - MER57B LTR ERV1 0 434 1 252 294 12 35 chr5 125087130 125087300 -74542850 + (TATATG)n Simple_repeat Simple_repeat 2 167 0 365 321 119 31 chr5 125087488 125088068 -74542082 - L1M4 LINE L1 -2189 3957 3327 195 139 0 0 chr5 125088100 125088136 -74542014 + (CA)n Simple_repeat Simple_repeat 1 36 0 765 211 68 97 chr5 125088348 125088711 -74541439 + MLT1A2 LTR MaLR 3 330 -66 1069 158 0 0 chr5 125088774 125088932 -74541218 + FRAM SINE Alu 1 158 -18 3294 94 30 15 chr5 125089092 125089562 -74540588 - L1PB2 LINE L1 0 6151 5675 734 165 0 55 chr5 125089562 125089689 -74540461 - FLAM_C SINE Alu -17 126 7 746 94 0 79 chr5 125089691 125089784 -74540366 - L1PB2 LINE L1 -460 5691 5609 2453 78 0 0 chr5 125089784 125090079 -74540071 - AluY SINE Alu -16 295 1 746 94 0 79 chr5 125090079 125090112 -74540038 - L1PB2 LINE L1 -542 5609 5575 697 331 19 0 chr5 125090639 125090896 -74539254 - MIR SINE MIR 0 262 1 26 0 0 0 chr5 125090986 125091012 -74539138 + AT_rich Low_complexity Low_complexity 1 26 0 295 275 60 48 chr5 125091183 125091350 -74538800 - MLT1K LTR MaLR -25 563 395 1933 220 117 40 chr5 125091799 125092472 -74537678 - MER50 LTR ERV1 0 734 10 1388 180 3 39 chr5 125094091 125094375 -74535775 - AluJo SINE Alu 0 312 39 252 284 0 40 chr5 125094715 125094789 -74535361 - MIR SINE MIR -99 109 39 294 192 0 0 chr5 125095449 125095501 -74534649 - MLT1A2 LTR MaLR -4 370 319 981 132 0 36 chr5 125095501 125095668 -74534482 - Charlie3 DNA MER1_type -4 2706 2546 236 158 329 26 chr5 125096477 125096553 -74533597 + LTR40a LTR ERVL 347 445 -74 233 159 145 14 chr5 125096498 125096567 -74533583 - LTR68 LTR ERV1 -643 97 20 * 231 303 77 82 chr5 125096584 125096779 -74533371 + LTR67 LTR ERVL 118 311 -246 853 161 0 36 chr5 125096796 125096933 -74533217 - FLAM_C SINE Alu 0 133 2 243 103 0 0 chr5 125097151 125097190 -74532960 - Alu SINE Alu 0 300 262 797 72 0 0 chr5 125097218 125097315 -74532835 + AluY SINE Alu 205 301 -10 234 202 144 29 chr5 125097332 125097436 -74532714 + L1ME4a LINE L1 6006 6121 0 2234 129 40 35 chr5 125097513 125097667 -74532483 + THE1C LTR MaLR 1 153 -222 1879 141 39 0 chr5 125097667 125097950 -74532200 - AluSx SINE Alu -18 294 1 2234 129 40 35 chr5 125097950 125098166 -74531984 + THE1C LTR MaLR 153 373 -2 2282 107 3 0 chr5 125098958 125099256 -74530894 - AluSp SINE Alu -14 299 1 2511 67 0 0 chr5 125099965 125100264 -74529886 + AluY SINE Alu 1 299 -12 1641 155 42 0 chr5 125100417 125100682 -74529468 - AluSx SINE Alu -24 288 13 22 0 0 0 chr5 125100683 125100705 -74529445 + AT_rich Low_complexity Low_complexity 1 22 0 239 341 22 22 chr5 125100705 125100884 -74529266 - L1M4 LINE L1 -2171 3975 3797 247 273 0 0 chr5 125100889 125100955 -74529195 - FAM SINE Alu -2 177 112 194 277 0 0 chr5 125100991 125101038 -74529112 + L2 LINE L2 3171 3217 -96 247 93 23 0 chr5 125101041 125101084 -74529066 + MADE1 DNA Mariner 4 47 -33 1075 206 204 52 chr5 125101174 125101518 -74528632 - MSTD LTR MaLR 0 396 1 29 28 0 0 chr5 125101634 125101670 -74528480 + AT_rich Low_complexity Low_complexity 1 36 0 461 364 60 16 chr5 125101833 125102149 -74528001 - HAL1b LINE L1 -563 785 456 180 0 0 0 chr5 125102188 125102208 -74527942 + (TG)n Simple_repeat Simple_repeat 2 21 0 * 306 67 0 0 chr5 125102207 125102252 -74527898 + (TA)n Simple_repeat Simple_repeat 1 45 0 519 264 85 0 chr5 125102252 125102381 -74527769 - MLT2D LTR ERVL -73 341 202 1018 70 78 0 chr5 125102468 125102597 -74527553 + MER85 DNA T2_type 1 139 0 601 281 97 24 chr5 125102935 125103277 -74526873 - L2 LINE L2 -168 3104 2748 298 300 33 42 chr5 125103277 125103397 -74526753 + MLT1K LTR MaLR 3 121 -467 263 338 225 0 chr5 125103614 125103756 -74526394 - MER91A DNA MER1_type -22 174 1 320 306 99 8 chr5 125103761 125103882 -74526268 + MLT1K LTR MaLR 320 451 -137 2743 136 39 73 chr5 125103883 125104578 -74525572 - L1MA9 LINE L1 -443 5862 5235 1857 185 36 17 chr5 125104578 125104934 -74525216 + MLT1A1 LTR MaLR 1 363 -2 4235 177 12 11 chr5 125104937 125105689 -74524461 + MLT1A1-int LTR MaLR 2 754 -981 251 274 95 0 chr5 125106718 125106813 -74523337 - L1M3e LINE L1 -6925 105 2 212 355 43 4 chr5 125107109 125107239 -74522911 + MIR SINE MIR 19 151 -57 1135 191 27 43 chr5 125107291 125107548 -74522602 - L1MDa LINE L1 -6287 253 1 1645 199 32 76 chr5 125107617 125107898 -74522252 + MLT2D LTR ERVL 2 259 -155 2222 105 10 0 chr5 125107898 125108193 -74521957 - AluSx SINE Alu -14 298 1 1645 199 32 76 chr5 125108193 125108343 -74521807 + MLT2D LTR ERVL 259 414 0 2917 225 64 25 chr5 125108785 125109783 -74520367 - L1ME1 LINE L1 -15 6151 5129 222 212 0 45 chr5 125110495 125110561 -74519589 + (CATATA)n Simple_repeat Simple_repeat 6 68 0 208 226 0 19 chr5 125113320 125113373 -74516777 - L2 LINE L2 -1 3312 3261 689 184 0 24 chr5 125113731 125113856 -74516294 + FLAM_A SINE Alu 1 122 -11 26 0 0 0 chr5 125113938 125113964 -74516186 + AT_rich Low_complexity Low_complexity 1 26 0 2382 76 3 0 chr5 125114690 125114992 -74515158 - AluY SINE Alu -8 303 1 1343 214 80 62 chr5 125115347 125115530 -74514620 + L1ME3A LINE L1 5706 5884 -286 2160 121 0 16 chr5 125115530 125115844 -74514306 + AluSx SINE Alu 1 309 -3 1343 214 80 62 chr5 125115844 125116108 -74514042 + L1ME3A LINE L1 5884 6161 -9 2471 234 23 9 chr5 125116120 125116721 -74513429 + MER82 DNA MER2_type 1 641 -12 2263 100 3 3 chr5 125116960 125117261 -74512889 - AluSq SINE Alu -12 301 1 22 25 0 25 chr5 125117460 125117472 -74512678 + AT_rich Low_complexity Low_complexity 1 12 -27 1808 166 17 3 chr5 125117472 125117762 -74512388 + AluJb SINE Alu 1 294 -18 22 25 0 25 chr5 125117762 125117789 -74512361 + AT_rich Low_complexity Low_complexity 12 39 0 1052 245 94 35 chr5 125117988 125118011 -74512139 - MLT1H1 LTR MaLR 0 555 535 2456 198 32 44 chr5 125118011 125118576 -74511574 + MER68 LTR ERV1 1 558 -4 1052 245 94 35 chr5 125118576 125118838 -74511312 - MLT1H1 LTR MaLR -20 535 253 234 214 0 0 chr5 125118837 125118879 -74511271 + MLT1G LTR MaLR 205 246 -344 * 6295 167 25 17 chr5 125119782 125121066 -74509084 - L1 LINE L1 -1170 4976 3683 889 194 29 65 chr5 125121046 125121355 -74508795 - L1ME1 LINE L1 -1268 4878 4581 * 201 328 146 18 chr5 125121393 125121564 -74508586 - L2 LINE L2 -595 2719 2527 359 61 21 0 chr5 125121580 125121639 -74508511 - Alu SINE Alu -4 296 244 1288 274 37 22 chr5 125121663 125122068 -74508082 - MLT1E2 LTR MaLR -130 496 86 1235 231 101 87 chr5 125122073 125122256 -74507894 - L1MC4a LINE L1 -1682 6126 5947 1906 129 52 0 chr5 125122256 125122543 -74507607 - AluSx SINE Alu -10 302 1 1235 231 101 87 chr5 125122543 125123060 -74507090 - L1MC4a LINE L1 -1861 5947 5416 286 219 67 9 chr5 125123041 125123146 -74507004 - L1ME1 LINE L1 -8 6158 6048 * 1803 183 40 26 chr5 125123194 125123698 -74506452 + Charlie5 DNA MER1_type 2098 2608 -4 22 0 0 0 chr5 125124704 125124726 -74505424 + AT_rich Low_complexity Low_complexity 1 22 0 2479 78 0 3 chr5 125124779 125125087 -74505063 + AluSc SINE Alu 1 307 -2 642 302 116 0 chr5 125125386 125125618 -74504532 + MIR SINE MIR 1 259 -3 28 48 0 0 chr5 125126069 125126111 -74504039 + AT_rich Low_complexity Low_complexity 1 42 0 262 322 9 9 chr5 125126147 125126262 -74503888 - L1ME1 LINE L1 -1914 5894 5780 3107 232 47 33 chr5 125126459 125127559 -74502591 + L1ME1 LINE L1 5051 6161 -5 1512 172 0 78 chr5 125127707 125128027 -74502123 + AluJo SINE Alu 1 295 -17 464 68 0 0 chr5 125128834 125128907 -74501243 - L1MD2 LINE L1 -1 6358 6286 252 296 153 10 chr5 125129367 125129465 -74500685 + L2 LINE L2 3186 3297 -16 1354 177 0 135 chr5 125129671 125129856 -74500294 - AluJo SINE Alu -13 289 81 2224 116 3 3 chr5 125129856 125130167 -74499983 - AluSq SINE Alu -2 311 1 2138 110 3 16 chr5 125130169 125130479 -74499671 - AluY SINE Alu -5 306 1 1354 177 0 135 chr5 125130479 125130624 -74499526 - AluJo SINE Alu -222 80 1 2263 81 34 0 chr5 125130631 125130926 -74499224 - AluY SINE Alu -6 305 1 1645 147 99 40 chr5 125131822 125132176 -74497974 + THE1C LTR MaLR 1 375 0 9363 125 34 26 chr5 125132178 125133743 -74496407 + THE1C-int LTR MaLR 3 1580 0 1502 209 50 16 chr5 125133743 125134106 -74496044 + THE1C LTR MaLR 1 375 0 26 30 0 0 chr5 125134936 125134969 -74495181 + AT_rich Low_complexity Low_complexity 1 33 0 277 237 0 26 chr5 125135364 125135440 -74494710 - HsTC2 DNA Tc2 -1811 87 14 240 189 19 19 chr5 125135616 125135669 -74494481 + Tigger1 DNA MER2_type 2 54 -2364 19298 184 28 20 chr5 125135677 125136014 -74494136 - L1PA13 LINE L1 -3 6811 6478 1993 133 3 13 chr5 125136014 125136323 -74493827 - AluSx SINE Alu -6 306 1 19298 184 28 20 chr5 125136323 125138146 -74492004 - L1PA13 LINE L1 -336 6478 4673 2430 93 0 0 chr5 125138146 125138457 -74491693 - AluY SINE Alu 0 311 1 19298 184 28 20 chr5 125138457 125142025 -74488125 - L1PA13 LINE L1 -2141 4673 880 3568 219 61 0 chr5 125142121 125142810 -74487340 - L1PA13 LINE L1 -6055 732 2 13495 123 35 57 chr5 125142811 125145234 -74484916 + Tigger1 DNA MER2_type 48 2415 -3 358 271 103 74 chr5 125145278 125145434 -74484716 - L1MC/D LINE L1 -2000 5808 5643 1975 161 53 31 chr5 125145434 125145849 -74484301 - MSTB LTR MaLR 0 426 3 358 271 103 74 chr5 125145849 125145895 -74484255 - L1MC/D LINE L1 -2165 5643 5600 1396 229 36 6 chr5 125146415 125146504 -74483646 - L1MB2 LINE L1 -7 6164 6079 225 0 0 0 chr5 125146504 125146529 -74483621 + (CCA)n Simple_repeat Simple_repeat 1 25 0 1396 229 36 6 chr5 125146529 125146775 -74483375 - L1MB2 LINE L1 -92 6079 5819 1857 146 7 11 chr5 125146788 125147075 -74483075 - AluJb SINE Alu -8 304 19 3079 228 26 16 chr5 125147075 125147914 -74482236 - L1MB2 LINE L1 -842 5304 4457 457 258 73 0 chr5 125148063 125148187 -74481963 - MIR SINE MIR -128 134 2 2332 107 0 0 chr5 125148703 125149012 -74481138 - AluSg SINE Alu -1 309 1 330 80 0 0 chr5 125149613 125149663 -74480487 + (CA)n Simple_repeat Simple_repeat 2 51 0 21 0 0 0 chr5 125150187 125150208 -74479942 + AT_rich Low_complexity Low_complexity 1 21 0 192 40 0 0 chr5 125150605 125150630 -74479520 + (TG)n Simple_repeat Simple_repeat 2 26 0 232 45 0 45 chr5 125150978 125151022 -74479128 + (TAAAA)n Simple_repeat Simple_repeat 4 45 0 372 131 0 0 chr5 125151023 125151086 -74479064 + MER67A LTR ERV1 223 273 -270 3798 45 4 2 chr5 125151106 125151573 -74478577 - L1PA3 LINE L1 0 6155 5688 252 221 93 47 chr5 125152561 125152647 -74477503 - MLT1J LTR MaLR -53 458 369 823 292 68 30 chr5 125152657 125152993 -74477157 - MLT1L LTR MaLR -260 355 7 700 266 143 39 chr5 125153278 125153352 -74476798 + L2 LINE L2 2853 2918 -395 1686 154 54 39 chr5 125153352 125153684 -74476466 - MER1B DNA MER1_type 0 337 1 700 266 143 39 chr5 125153684 125154022 -74476128 + L2 LINE L2 2918 3308 -5 1160 246 36 18 chr5 125154776 125155110 -74475040 + L1MC5 LINE L1 5291 5630 -2178 551 255 50 21 chr5 125155133 125155372 -74474778 + L1MC5 LINE L1 5686 5931 -1877 215 214 55 35 chr5 125155384 125155511 -74474639 + (TATAA)n Simple_repeat Simple_repeat 5 137 -15 1835 177 0 7 chr5 125155511 125155811 -74474339 - AluJb SINE Alu -14 298 1 215 214 55 35 chr5 125155811 125155828 -74474322 + (TATAA)n Simple_repeat Simple_repeat 137 152 0 290 229 0 42 chr5 125156067 125156163 -74473987 + L1MC5 LINE L1 6821 6912 -1049 389 287 17 28 chr5 125156368 125156549 -74473601 + L1MC5 LINE L1 7048 7226 -735 262 336 9 17 chr5 125156607 125156723 -74473427 + L1MC4 LINE L1 7360 7474 -568 576 262 106 42 chr5 125156740 125157118 -74473032 + L1MC5 LINE L1 7506 7907 -54 280 286 89 36 chr5 125157508 125157755 -74472395 - MLT1H LTR MaLR -13 536 220 579 234 38 6 chr5 125157782 125157940 -74472210 - L1MEc LINE L1 -5749 647 485 549 219 144 17 chr5 125157942 125158247 -74471903 + L1ME4a LINE L1 5066 5425 -743 198 194 0 0 chr5 125158434 125158470 -74471680 - MIR SINE MIR -115 93 58 2420 83 0 16 chr5 125158570 125158882 -74471268 + AluSq SINE Alu 2 308 -5 609 296 90 30 chr5 125158964 125159430 -74470720 + L1ME4a LINE L1 5464 5957 -205 180 189 178 33 chr5 125159578 125159668 -74470482 - L2 LINE L2 -911 2403 2301 25 65 0 0 chr5 125159709 125159755 -74470395 + AT_rich Low_complexity Low_complexity 1 46 0 230 288 61 0 chr5 125159765 125159897 -74470253 + L1ME4a LINE L1 5978 6117 -4 26 30 0 0 chr5 125160204 125160237 -74469913 + AT_rich Low_complexity Low_complexity 1 33 0 264 161 11 21 chr5 125160369 125160462 -74469688 + A-rich Low_complexity Low_complexity 5 96 0 209 262 0 37 chr5 125160578 125160742 -74469408 + A-rich Low_complexity Low_complexity 3 160 0 1349 177 102 4 chr5 125161294 125161560 -74468590 - AluJb SINE Alu -18 294 3 1150 189 109 4 chr5 125161314 125161562 -74468588 - AluJb SINE Alu -38 274 1 4213 127 64 2 chr5 125162599 125163239 -74466911 - L1PA16 LINE L1 -8 6158 5479 4697 133 26 11 chr5 125163249 125163968 -74466182 - L1PA16 LINE L1 -9 6157 5428 5606 181 47 30 chr5 125163969 125165127 -74465023 + MER11A LTR ERVK 1 1266 0 1871 134 99 0 chr5 125165129 125165413 -74464737 - AluSx SINE Alu 0 312 1 2327 167 4 21 chr5 125165414 125165871 -74464279 - L1PA16 LINE L1 -726 5439 4997 1984 120 9 49 chr5 125165871 125166196 -74463954 - AluSx SINE Alu 0 312 1 2327 167 4 21 chr5 125166196 125166308 -74463842 - L1PA16 LINE L1 -1168 4997 4885 894 65 73 8 chr5 125166308 125166472 -74463678 - L1PA7 LINE L1 0 6154 6020 219 139 0 0 chr5 125166575 125166611 -74463539 + (TG)n Simple_repeat Simple_repeat 2 37 0 768 194 0 16 chr5 125166638 125166767 -74463383 - FLAM_C SINE Alu -14 129 3 752 207 0 0 chr5 125166892 125167013 -74463137 - FLAM_A SINE Alu -12 121 1 1899 162 3 7 chr5 125167183 125167486 -74462664 - AluJo SINE Alu -10 302 1 217 329 82 0 chr5 125167808 125167893 -74462257 + L2 LINE L2 1217 1308 -2006 319 246 152 45 chr5 125168438 125168702 -74461448 + L2 LINE L2 1893 2184 -1130 1957 122 4 4 chr5 125168814 125169084 -74461066 + AluSx SINE Alu 18 287 -25 229 306 68 54 chr5 125169166 125169313 -74460837 + L2 LINE L2 2381 2529 -785 1314 95 11 11 chr5 125169572 125169751 -74460399 - AluSq SINE Alu -134 179 1 2046 108 44 10 chr5 125170121 125170417 -74459733 + AluSx SINE Alu 1 306 -6 1328 167 44 56 chr5 125170432 125170628 -74459522 + LTR56 LTR ERV1 138 300 -137 2519 60 0 3 chr5 125170628 125170930 -74459220 + AluY SINE Alu 2 302 -9 1328 167 44 56 chr5 125170930 125171067 -74459083 + LTR56 LTR ERV1 300 437 0 442 179 97 150 chr5 125171358 125171565 -74458585 - MIR SINE MIR -2 260 65 347 266 108 29 chr5 125171795 125171934 -74458216 - MIR SINE MIR -111 151 2 321 271 73 21 chr5 125171941 125172037 -74458113 + MLT1K LTR MaLR 182 282 -306 21 0 0 0 chr5 125172261 125172282 -74457868 + AT_rich Low_complexity Low_complexity 1 21 0 318 106 0 0 chr5 125172810 125172857 -74457293 + (CA)n Simple_repeat Simple_repeat 2 48 0 953 144 98 0 chr5 125172859 125173033 -74457117 + AluJb SINE Alu 117 307 -5 302 212 259 7 chr5 125173226 125173373 -74456777 + AluJ/FLAM SINE Alu 3 95 -207 672 179 0 17 chr5 125173378 125173495 -74456655 + FLAM_C SINE Alu 3 117 -16 30 27 0 0 chr5 125173495 125173532 -74456618 + AT_rich Low_complexity Low_complexity 1 37 0 715 162 0 8 chr5 125174667 125174784 -74455366 + FLAM_C SINE Alu 1 116 -17 2286 103 3 0 chr5 125174993 125175303 -74454847 + AluSx SINE Alu 1 311 -1 270 317 104 20 chr5 125175476 125175678 -74454472 - MIR SINE MIR -1 261 43 2178 108 3 3 chr5 125176312 125176617 -74453533 + AluSq SINE Alu 1 305 -8 1753 168 3 0 chr5 125177169 125177454 -74452696 + AluJb SINE Alu 1 286 -26 245 125 0 0 chr5 125177999 125178031 -74452119 - 5S rRNA rRNA 0 121 90 2122 101 7 3 chr5 125180351 125180638 -74449512 + AluSg SINE Alu 1 288 -22 2111 106 22 19 chr5 125180660 125180971 -74449179 + AluSq SINE Alu 1 312 -1 476 157 29 29 chr5 125181129 125181231 -74448919 + U13 snRNA snRNA 1 102 -2 2221 73 0 18 chr5 125181576 125181904 -74448246 + AluY SINE Alu 2 324 0 873 187 45 0 chr5 125182232 125182387 -74447763 + FRAM SINE Alu 1 162 -14 582 175 32 40 chr5 125182560 125182686 -74447464 + FLAM_A SINE Alu 18 142 0 535 75 0 0 chr5 125182828 125182895 -74447255 - Alu SINE Alu -14 295 229 1991 92 55 20 chr5 125183111 125183233 -74446917 + AluSx SINE Alu 1 117 -195 2116 124 7 3 chr5 125183233 125183539 -74446611 + AluSq SINE Alu 1 307 -6 1991 92 55 20 chr5 125183539 125183708 -74446442 + AluSx SINE Alu 117 302 -10 986 179 0 6 chr5 125184012 125184174 -74445976 + AluJb SINE Alu 135 295 -17 2401 68 0 13 chr5 125184211 125184518 -74445632 + AluY SINE Alu 1 303 -8 3733 188 13 11 chr5 125184684 125185465 -74444685 - L1P LINE L1 -1662 4484 3703 500 219 28 51 chr5 125185474 125185637 -74444513 - L1P LINE L1 -2748 3398 3239 2122 101 0 14 chr5 125185637 125185954 -74444196 - AluY SINE Alu 0 313 1 500 219 28 51 chr5 125185954 125186004 -74444146 - L1P LINE L1 -2907 3239 3189 309 279 66 35 chr5 125186055 125186252 -74443898 - Charlie7 DNA MER1_type 0 2612 2410 522 219 25 8 chr5 125186267 125186386 -74443764 - Charlie7 DNA MER1_type -1910 702 582 21 57 0 0 chr5 125186520 125186555 -74443595 + AT_rich Low_complexity Low_complexity 1 35 0 2376 85 0 0 chr5 125186607 125186900 -74443250 + AluSg SINE Alu 1 293 -17 793 134 75 8 chr5 125188314 125188448 -74441702 - FAM SINE Alu -12 173 31 306 279 72 36 chr5 125188515 125188626 -74441524 + L2 LINE L2 3199 3313 0 22 0 0 0 chr5 125188636 125188658 -74441492 + AT_rich Low_complexity Low_complexity 1 22 0 1590 162 23 43 chr5 125189306 125189609 -74440541 + AluSx SINE Alu 1 297 -15 776 277 89 52 chr5 125189612 125189865 -74440285 - L2 LINE L2 -1 3312 3041 1689 187 0 0 chr5 125189865 125190138 -74440012 - AluJo SINE Alu -39 273 1 776 277 89 52 chr5 125190138 125190231 -74439919 - L2 LINE L2 -272 3041 2953 776 154 101 13 chr5 125190934 125191083 -74439067 + MER5A DNA MER1_type 28 189 0 2023 105 76 6 chr5 125191480 125191844 -74438306 + LTR7 LTR ERV1 1 450 0 17644 131 7 28 chr5 125191859 125193886 -74436264 + HERVH LTR ERV1 1 2251 -5462 2413 90 0 10 chr5 125193886 125194198 -74435952 - AluY SINE Alu -2 309 1 17644 131 7 28 chr5 125194198 125195508 -74434642 + HERVH LTR ERV1 2251 3587 -4126 1171 119 5 31 chr5 125195502 125195623 -74434527 + HERVH LTR ERV1 3806 3922 -3791 * 2295 81 3 19 chr5 125195623 125195932 -74434218 - AluY SINE Alu -7 304 1 1171 119 5 31 chr5 125195932 125196003 -74434147 + HERVH LTR ERV1 3922 3993 -3720 255 277 31 0 chr5 125196318 125196358 -74433792 + AluSp SINE Alu 130 171 -132 1311 235 49 67 chr5 125196358 125197114 -74433036 + LTR1B LTR ERV1 1 826 0 1649 159 0 4 chr5 125197114 125197366 -74432784 + AluSx SINE Alu 31 281 -31 2067 130 0 0 chr5 125198312 125198639 -74431511 - AluSx SINE Alu 0 327 1 825 136 0 0 chr5 125200371 125200489 -74429661 - AluSg/x SINE Alu -16 294 177 2500 71 0 0 chr5 125200556 125200853 -74429297 - AluY SINE Alu -14 297 1 1806 181 0 3 chr5 125201018 125201311 -74428839 + AluJo SINE Alu 1 292 -20 909 145 0 0 chr5 125201463 125201594 -74428556 - FLAM_C SINE Alu -12 131 1 767 188 8 0 chr5 125201766 125201894 -74428256 - FLAM_C SINE Alu -4 129 1 7951 32 1 3 chr5 125201994 125202937 -74427213 + L1PA5 LINE L1 5206 6146 -8 275 244 130 30 chr5 125203153 125203284 -74426866 + HAL1 LINE L1 2059 2202 -305 540 220 56 36 chr5 125203317 125203457 -74426693 + MIR SINE MIR 19 155 -65 693 263 53 5 chr5 125203542 125203751 -74426399 + HAL1 LINE L1 2282 2500 -7 406 189 0 53 chr5 125204035 125204130 -74426020 - MLT1F1 LTR MaLR -442 125 36 1249 130 63 0 chr5 125204131 125204354 -74425796 - L1MD3 LINE L1 -879 7116 6880 25 0 0 0 chr5 125204355 125204380 -74425770 + AT_rich Low_complexity Low_complexity 1 25 0 379 125 25 38 chr5 125204623 125204703 -74425447 - MER31-int LTR ERV1 -3490 1446 1368 249 83 0 0 chr5 125205072 125205108 -74425042 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 208 254 0 0 chr5 125205257 125205312 -74424838 + T-rich Low_complexity Low_complexity 1 55 0 1009 171 0 0 chr5 125205401 125205553 -74424597 - AluJo SINE Alu -14 288 137 849 295 71 6 chr5 125205707 125206043 -74424107 - L1MEc LINE L1 -1774 4441 4084 820 122 50 0 chr5 125206053 125206192 -74423958 - L1MA9 LINE L1 -7 6305 6160 2937 148 43 0 chr5 125206230 125206723 -74423427 + MER73 LTR ERVL 131 644 0 399 204 68 0 chr5 125206744 125206832 -74423318 - L1MA8 LINE L1 -130 6161 6068 723 189 67 24 chr5 125206856 125207020 -74423130 - L1MEc LINE L1 -2185 4030 3860 920 247 120 9 chr5 125207027 125207485 -74422665 - L1MEc LINE L1 -2634 3581 3073 767 190 0 0 chr5 125207496 125207612 -74422538 - FLAM_C SINE Alu -17 116 1 574 156 52 10 chr5 125207647 125207743 -74422407 - AluJo SINE Alu -13 299 200 831 155 0 8 chr5 125207750 125207879 -74422271 - AluJo SINE Alu -174 128 1 1566 264 37 25 chr5 125207879 125208478 -74421672 - L1MEc LINE L1 -3140 3075 2470 2719 197 229 19 chr5 125208529 125208590 -74421560 - MER21B LTR ERV1 -40 823 776 300 53 0 0 chr5 125208590 125208628 -74421522 + (CAAG)n Simple_repeat Simple_repeat 1 38 0 2719 197 229 19 chr5 125208628 125209246 -74420904 - MER21B LTR ERV1 -87 776 1 296 185 0 0 chr5 125209246 125209300 -74420850 - L1MEc LINE L1 -3748 2467 2414 813 260 46 41 chr5 125209321 125209732 -74420418 - L1MEc LINE L1 -4070 2326 1914 531 128 0 0 chr5 125209736 125209814 -74420336 + L1MC3 LINE L1 7679 7756 -29 715 176 0 63 chr5 125209850 125209992 -74420158 - FLAM_C SINE Alu 0 133 1 3833 261 56 3 chr5 125210001 125210222 -74419928 - L1M4 LINE L1 -1667 4479 4271 396 0 0 0 chr5 125210222 125210266 -74419884 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 3833 261 56 3 chr5 125210266 125211258 -74418892 - L1M4 LINE L1 -1875 4271 3202 1461 167 23 90 chr5 125211259 125211613 -74418537 - MLT1B LTR MaLR 0 390 61 2873 121 16 31 chr5 125211750 125212475 -74417675 - HERVH LTR ERV1 -6679 1034 2 1699 101 75 25 chr5 125212490 125212861 -74417289 - LTR7 LTR ERV1 0 450 1 774 154 101 13 chr5 125213258 125213407 -74416743 - MER5A DNA MER1_type 0 189 28 793 277 89 52 chr5 125214110 125214203 -74415947 + L2 LINE L2 2953 3041 -272 1718 187 0 0 chr5 125214203 125214476 -74415674 + AluJo SINE Alu 1 273 -39 793 277 89 52 chr5 125214476 125214729 -74415421 + L2 LINE L2 3041 3312 -1 1737 166 3 39 chr5 125214732 125214902 -74415248 - AluJb SINE Alu -15 297 141 2316 119 0 0 chr5 125214902 125215213 -74414937 - AluSq SINE Alu -2 311 1 1737 166 3 39 chr5 125215213 125215350 -74414800 - AluJb SINE Alu -171 141 1 2123 99 0 7 chr5 125215405 125215688 -74414462 + AluSq SINE Alu 1 281 -32 420 20 0 0 chr5 125215688 125215737 -74414413 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 2248 106 20 0 chr5 125215750 125216051 -74414099 + AluSq SINE Alu 1 307 -6 2151 102 3 0 chr5 125216595 125216890 -74413260 - AluSq SINE Alu -17 296 1 23 0 0 0 chr5 125217552 125217575 -74412575 + AT_rich Low_complexity Low_complexity 1 23 0 2442 91 0 0 chr5 125217677 125217986 -74412164 + AluSx SINE Alu 3 311 -1 1582 115 4 50 chr5 125218055 125218334 -74411816 + AluSx SINE Alu 39 304 -8 1950 181 30 28 chr5 125219117 125219248 -74410902 - L1MC3 LINE L1 0 7785 7656 2439 85 3 0 chr5 125219248 125219555 -74410595 + AluSp SINE Alu 1 308 -5 1950 181 30 28 chr5 125219555 125219887 -74410263 - L1MC3 LINE L1 -129 7656 7321 1910 106 4 4 chr5 125219887 125220142 -74410008 - AluSx SINE Alu -11 301 47 488 211 125 13 chr5 125220605 125220757 -74409393 - MER69A DNA AcHobo -7 170 2 2396 82 10 0 chr5 125220996 125221300 -74408850 - AluSg SINE Alu -3 307 1 205 375 0 34 chr5 125222017 125222105 -74408045 - L2 LINE L2 -45 3227 3143 279 0 0 0 chr5 125222108 125222139 -74408011 + (CA)n Simple_repeat Simple_repeat 2 32 0 494 236 122 0 chr5 125222193 125222341 -74407809 - MER112 DNA MER1_type -6 254 89 1217 256 54 35 chr5 125222353 125222954 -74407196 - L2 LINE L2 -73 3240 2632 415 223 89 9 chr5 125222949 125223061 -74407089 + L2 LINE L2 3190 3310 -3 * 296 279 13 0 chr5 125223062 125223141 -74407009 - MER112 DNA MER1_type -176 84 5 239 321 0 37 chr5 125223155 125223236 -74406914 - L2 LINE L2 -201 3071 2994 251 315 0 14 chr5 125223242 125223315 -74406835 - L2 LINE L2 -1040 2274 2203 422 74 0 49 chr5 125223721 125223802 -74406348 + THE1-int LTR MaLR 1504 1580 0 2236 123 3 3 chr5 125223965 125224274 -74405876 + AluSx SINE Alu 1 309 -3 2323 62 3 0 chr5 125224528 125224816 -74405334 - AluY SINE Alu -2 309 21 696 114 0 0 chr5 125224897 125225002 -74405148 - MSTD LTR MaLR -291 105 1 2216 133 0 0 chr5 125225063 125225365 -74404785 - AluSx SINE Alu -10 302 1 23 33 0 0 chr5 125225371 125225401 -74404749 + AT_rich Low_complexity Low_complexity 1 30 0 1479 193 42 0 chr5 125225408 125225672 -74404478 - AluJo SINE Alu -37 275 1 22 35 0 0 chr5 125225716 125225745 -74404405 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 125225871 125225913 -74404237 + AT_rich Low_complexity Low_complexity 1 42 0 377 280 8 0 chr5 125226203 125226321 -74403829 - L1MC4a LINE L1 -1213 6595 6477 654 268 15 24 chr5 125226352 125226557 -74403593 + LTR16C LTR ERVL 276 478 -13 195 139 0 0 chr5 125226849 125226885 -74403265 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 2260 116 0 0 chr5 125227397 125227700 -74402450 + AluSx SINE Alu 1 303 -9 5199 85 9 1 chr5 125228011 125229923 -74400227 + L1PA8 LINE L1 3430 6138 -34 5199 44 0 2 chr5 125229923 125230552 -74399598 + L1PA8 LINE L1 5532 6162 -10 5199 85 9 1 chr5 125230552 125230578 -74399572 + L1PA8 LINE L1 6138 6162 -10 221 210 28 7 chr5 125230823 125230871 -74399279 + MIR SINE MIR 28 76 -132 202 314 0 14 chr5 125231344 125231414 -74398736 + MIR SINE MIR 86 154 -108 1229 116 10 5 chr5 125231414 125231612 -74398538 + MER2 DNA MER2_type 1 199 -146 21 82 0 0 chr5 125231612 125231661 -74398489 + AT_rich Low_complexity Low_complexity 1 49 0 188 313 24 60 chr5 125231850 125231933 -74398217 + MIR SINE MIR 20 99 -163 203 245 0 20 chr5 125232010 125232046 -74398104 + CT-rich Low_complexity Low_complexity 3 39 -11 1587 170 16 54 chr5 125232046 125232363 -74397787 - AluJo SINE Alu -7 305 1 203 245 0 20 chr5 125232363 125232375 -74397775 + CT-rich Low_complexity Low_complexity 39 50 0 236 205 18 143 chr5 125233049 125233161 -74396989 - MER102a DNA MER1_type -11 319 222 237 308 11 44 chr5 125233163 125233254 -74396896 - MER102a DNA MER1_type -240 90 3 2126 110 17 3 chr5 125233965 125234266 -74395884 + AluSx SINE Alu 6 310 -2 858 209 0 12 chr5 125234611 125234774 -74395376 - FRAM SINE Alu -16 160 1 2258 111 7 0 chr5 125235412 125235710 -74394440 - AluSx SINE Alu -12 300 1 2069 78 48 0 chr5 125235736 125236006 -74394144 - AluSp SINE Alu -2 311 29 415 313 5 39 chr5 125236301 125236454 -74393696 + MIR SINE MIR 18 167 -66 1772 171 7 0 chr5 125236854 125237152 -74392998 - AluJb SINE Alu -12 300 1 429 254 0 0 chr5 125237471 125237601 -74392549 + (TA)n Simple_repeat Simple_repeat 1 130 0 483 303 92 58 chr5 125237606 125237900 -74392250 + L2 LINE L2 2289 2592 -722 670 190 89 0 chr5 125237942 125238121 -74392029 - L1MC4 LINE L1 -146 7896 7702 2111 130 13 3 chr5 125238251 125238552 -74391598 - AluSx SINE Alu -8 304 1 255 338 133 0 chr5 125238582 125238733 -74391417 + MIR3 SINE MIR 35 205 -3 719 177 0 0 chr5 125240089 125240202 -74389948 - FLAM_C SINE Alu -25 118 6 2246 103 0 3 chr5 125240408 125240709 -74389441 - AluSc SINE Alu -9 300 1 760 173 0 58 chr5 125240735 125240874 -74389276 - FLAM_C SINE Alu -2 131 1 207 0 0 0 chr5 125240918 125240941 -74389209 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 705 135 0 0 chr5 125241802 125241906 -74388244 - AluSx SINE Alu -15 297 194 1087 90 0 0 chr5 125241907 125242040 -74388110 - AluSx SINE Alu -172 141 9 201 182 23 0 chr5 125243527 125243571 -74386579 + (CCCCAG)n Simple_repeat Simple_repeat 6 50 0 25 0 0 0 chr5 125243624 125243649 -74386501 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 125244002 125244026 -74386124 + AT_rich Low_complexity Low_complexity 1 24 0 2542 184 61 42 chr5 125245301 125245925 -74384225 + MER92B LTR ERV1 1 636 0 301 211 42 90 chr5 125246021 125246039 -74384111 - L1MA10 LINE L1 -2 6332 6315 1045 240 58 58 chr5 125246039 125246472 -74383678 - L1ME1 LINE L1 -11 6155 5723 1812 130 0 123 chr5 125246477 125246876 -74383274 + MLT1A1 LTR MaLR 1 350 -15 547 247 138 0 chr5 125246886 125247060 -74383090 - L1ME1 LINE L1 -445 5721 5524 568 100 0 0 chr5 125247218 125247298 -74382852 - U6 snRNA snRNA -27 80 1 4478 162 61 39 chr5 125247434 125248206 -74381944 - L1MC3 LINE L1 -2 7783 6982 1805 156 59 3 chr5 125248206 125248494 -74381656 - AluJo SINE Alu -6 306 3 4478 162 61 39 chr5 125248494 125248738 -74381412 - L1MC3 LINE L1 -803 6982 6745 790 199 0 51 chr5 125248792 125248981 -74381169 + FRAM SINE Alu 1 180 0 2149 119 0 0 chr5 125249443 125249737 -74380413 - AluSx SINE Alu -16 296 3 477 240 58 58 chr5 125249738 125249892 -74380258 + MIR SINE MIR 99 252 -10 21 0 0 0 chr5 125249915 125249936 -74380214 + AT_rich Low_complexity Low_complexity 1 21 0 210 236 73 0 chr5 125250284 125250339 -74379811 - MER5B DNA MER1_type 0 178 120 243 239 303 49 chr5 125250544 125250686 -74379464 - MER5B DNA MER1_type 0 178 1 1921 119 74 4 chr5 125250858 125251127 -74379023 + AluSx SINE Alu 1 288 -24 315 125 58 0 chr5 125251127 125251231 -74378919 + (TA)n Simple_repeat Simple_repeat 1 110 0 321 250 79 0 chr5 125251359 125251435 -74378715 + FLAM_A SINE Alu 18 99 -34 2047 108 10 54 chr5 125251995 125252309 -74377841 + AluSx SINE Alu 1 300 -12 1181 243 161 13 chr5 125252675 125253127 -74377023 + MLT1E2 LTR MaLR 52 570 -56 809 168 40 0 chr5 125253175 125253324 -74376826 + MER41B LTR ERV1 481 635 0 4514 121 19 3 chr5 125253324 125254003 -74376147 + MER41B-int LTR ERV1 1 690 -5256 1879 127 55 26 chr5 125254005 125254351 -74375799 + MER41B-int LTR ERV1 1407 1762 -4184 699 120 17 0 chr5 125254352 125254469 -74375681 + MER41B-int LTR ERV1 1901 2019 -3927 * 4662 122 31 44 chr5 125254467 125255156 -74374994 + MER41B-int LTR ERV1 2791 3487 -4050 8982 68 113 11 chr5 125255156 125256413 -74373737 - SVA Other Other 0 1386 2 4662 122 31 44 chr5 125256413 125256436 -74373714 + MER41B-int LTR ERV1 3487 3509 -4028 2178 111 7 0 chr5 125256436 125256725 -74373425 - AluSg SINE Alu -19 291 1 4662 122 31 44 chr5 125256725 125256869 -74373281 + MER41B-int LTR ERV1 3509 3637 -3900 * 15982 108 29 13 chr5 125256857 125257687 -74372463 + MER41B-int LTR ERV1 3300 4115 -1831 2213 134 0 0 chr5 125257687 125257992 -74372158 + AluSx SINE Alu 1 305 -7 15982 108 29 13 chr5 125257992 125259767 -74370383 + MER41B-int LTR ERV1 4115 5946 0 2901 99 48 0 chr5 125259767 125260203 -74369947 + MER41B LTR ERV1 1 457 -178 13668 38 1 2 chr5 125260215 125262944 -74367206 + L1PA5 LINE L1 3429 6154 0 329 121 15 15 chr5 125262975 125263041 -74367109 + MER41B LTR ERV1 482 547 -88 2138 103 10 13 chr5 125263056 125263191 -74366959 + AluSx SINE Alu 1 135 -177 2909 13 0 0 chr5 125263191 125263509 -74366641 + AluYb8 SINE Alu 1 318 0 2138 103 10 13 chr5 125263509 125263683 -74366467 + AluSx SINE Alu 135 309 -3 478 232 140 12 chr5 125264321 125264485 -74365665 - L2 LINE L2 -655 2659 2475 704 247 96 14 chr5 125264527 125264871 -74365279 - LTR56 LTR ERV1 -1 444 73 185 217 109 0 chr5 125265659 125265705 -74364445 + MIR SINE MIR 91 141 -67 411 314 107 78 chr5 125266159 125266685 -74363465 - L1M2 LINE L1 -5645 1204 664 291 296 177 32 chr5 125266966 125267152 -74362998 + L2 LINE L2 2074 2286 -1028 190 213 213 0 chr5 125267359 125267420 -74362730 - L2 LINE L2 -294 3019 2946 256 325 86 8 chr5 125268802 125268919 -74361231 - L2 LINE L2 0 3272 3147 501 127 0 0 chr5 125269314 125269393 -74360757 + (TA)n Simple_repeat Simple_repeat 2 80 0 25 31 0 0 chr5 125269924 125269956 -74360194 + AT_rich Low_complexity Low_complexity 1 32 0 250 269 30 0 chr5 125270287 125270354 -74359796 - L2 LINE L2 0 3272 3204 2070 116 0 20 chr5 125270408 125270573 -74359577 - AluSx SINE Alu -15 297 139 2243 95 3 13 chr5 125270573 125270879 -74359271 - AluSp SINE Alu -10 303 1 2070 116 0 20 chr5 125270879 125271016 -74359134 - AluSx SINE Alu -173 139 1 189 195 0 0 chr5 125271353 125271394 -74358756 + GA-rich Low_complexity Low_complexity 2 42 0 669 275 46 33 chr5 125271424 125271729 -74358421 + MER102b DNA MER1_type 23 331 -10 2443 84 0 6 chr5 125271895 125272206 -74357944 + AluSg SINE Alu 1 309 -1 673 159 0 0 chr5 125273198 125273305 -74356845 + FRAM SINE Alu 40 146 -30 3493 151 46 76 chr5 125273514 125274042 -74356108 - L1MB4 LINE L1 -6 6174 5641 316 25 0 0 chr5 125274042 125274082 -74356068 + MADE1 DNA Mariner 1 40 -40 3493 151 46 76 chr5 125274082 125274387 -74355763 - L1MB4 LINE L1 -539 5641 5328 1707 220 26 35 chr5 125274398 125274825 -74355325 - LTR40b LTR ERVL -37 425 3 18333 110 7 16 chr5 125274868 125275532 -74354618 - L1PA11 LINE L1 -2 6172 5503 2272 78 0 24 chr5 125275532 125275862 -74354288 - AluY SINE Alu 0 311 1 1926 163 0 0 chr5 125275866 125276161 -74353989 - AluSx SINE Alu -17 295 1 18333 110 7 16 chr5 125276161 125279170 -74350980 - L1PA11 LINE L1 -674 5500 2508 4986 144 0 10 chr5 125279174 125280067 -74350083 + L1P LINE L1 974 1857 -4289 216 256 0 0 chr5 125280847 125280933 -74349217 + CT-rich Low_complexity Low_complexity 3 88 0 202 125 0 25 chr5 125281172 125281212 -74348938 + (CGG)n Simple_repeat Simple_repeat 3 41 0 4057 81 16 50 chr5 125281304 125281982 -74348168 + L1P LINE L1 1844 2498 -3648 13881 199 32 32 chr5 125281982 125284412 -74345738 - L1P3 LINE L1 -2249 4212 1784 2167 140 3 0 chr5 125284412 125284720 -74345430 - AluSx SINE Alu -3 309 1 13881 199 32 32 chr5 125284720 125285209 -74344941 - L1P3 LINE L1 -4677 1784 1297 186 103 0 0 chr5 125285209 125285238 -74344912 + (TTG)n Simple_repeat Simple_repeat 2 30 0 13881 199 32 32 chr5 125285238 125286502 -74343648 - L1P3 LINE L1 -5164 1297 24 4560 204 39 45 chr5 125286501 125287783 -74342367 - L1MC4a LINE L1 -140 7668 6395 * 2067 124 3 34 chr5 125287795 125288117 -74342033 - AluSx SINE Alu 0 312 1 203 184 0 0 chr5 125288874 125288912 -74341238 + T-rich Low_complexity Low_complexity 1 38 0 10226 42 3 114 chr5 125288913 125290470 -74339680 - SVA Other Other -2 1384 1 2246 117 0 26 chr5 125290628 125290937 -74339213 - AluSx SINE Alu -11 301 1 257 329 105 35 chr5 125291268 125291617 -74338533 + L2 LINE L2 2694 3061 -211 600 254 176 15 chr5 125291962 125292167 -74337983 + MIR SINE MIR 15 252 -10 210 368 0 0 chr5 125292190 125292266 -74337884 + CT-rich Low_complexity Low_complexity 1 76 0 2327 86 14 0 chr5 125292612 125292904 -74337246 - AluSp SINE Alu -16 297 2 5441 126 34 7 chr5 125293776 125295474 -74334676 - L1PA15 LINE L1 -2 6163 4432 1436 86 34 0 chr5 125295582 125295815 -74334335 - L1P LINE L1 -1163 4983 4743 572 199 163 0 chr5 125295833 125296029 -74334121 - L1ME LINE L1 -679 5485 5258 24 32 0 0 chr5 125296169 125296200 -74333950 + AT_rich Low_complexity Low_complexity 1 31 0 501 47 0 0 chr5 125297467 125297531 -74332619 + (TG)n Simple_repeat Simple_repeat 2 65 0 24 53 0 0 chr5 125298192 125298230 -74331920 + AT_rich Low_complexity Low_complexity 1 38 0 220 214 0 0 chr5 125299220 125299262 -74330888 + T-rich Low_complexity Low_complexity 4 45 0 1725 172 9 50 chr5 125299265 125299585 -74330565 - AluJo SINE Alu -2 310 4 645 295 47 32 chr5 125300299 125300638 -74329512 - MLT1I LTR MaLR -63 346 3 425 157 35 17 chr5 125301056 125301171 -74328979 + CT-rich Low_complexity Low_complexity 3 119 0 2395 84 3 6 chr5 125301185 125301496 -74328654 + AluSg SINE Alu 1 310 0 1636 147 0 52 chr5 125301503 125301775 -74328375 - AluJb SINE Alu -39 273 16 230 285 55 35 chr5 125301786 125301986 -74328164 - MLT1J LTR MaLR -5 506 303 25 31 0 0 chr5 125302262 125302294 -74327856 + AT_rich Low_complexity Low_complexity 1 32 0 263 132 0 0 chr5 125302327 125302365 -74327785 - Alu SINE Alu -250 53 16 22 0 0 0 chr5 125304706 125304728 -74325422 + AT_rich Low_complexity Low_complexity 1 22 0 1686 156 3 28 chr5 125304778 125305090 -74325060 + AluJo SINE Alu 1 305 0 2142 71 0 0 chr5 125305254 125305532 -74324618 - AluY SINE Alu 0 306 29 1402 162 0 68 chr5 125306517 125306783 -74323367 - AluJo SINE Alu -25 287 40 22 0 0 0 chr5 125307431 125307453 -74322697 + AT_rich Low_complexity Low_complexity 1 22 0 1629 164 133 6 chr5 125307505 125307829 -74322321 - MLT1A1 LTR MaLR 0 365 1 2107 112 4 0 chr5 125307903 125308204 -74321946 + AluSg1 SINE Alu 1 302 0 26 0 0 0 chr5 125309322 125309348 -74320802 + AT_rich Low_complexity Low_complexity 1 26 0 383 290 214 24 chr5 125309585 125309837 -74320313 - L2 LINE L2 0 3313 3014 470 121 0 0 chr5 125309866 125309932 -74320218 + Tigger1 DNA MER2_type 2353 2418 0 1193 148 0 0 chr5 125310031 125310213 -74319937 + MSTD LTR MaLR 215 396 0 1530 219 94 10 chr5 125310235 125310628 -74319522 - MLT2E LTR ERVL -8 620 195 541 206 0 0 chr5 125310634 125310731 -74319419 - FLAM_C SINE Alu -35 108 12 1592 149 37 18 chr5 125310743 125311275 -74318875 + L1M1 LINE L1 5017 5559 -741 295 322 110 43 chr5 125311286 125311631 -74318519 - L1M3b LINE L1 -5913 368 1 4900 252 30 10 chr5 125311631 125312781 -74317369 - ERVL LTR ERVL -586 5178 4006 630 278 88 71 chr5 125312783 125313315 -74316835 - MLT1H LTR MaLR -4 545 5 509 232 0 10 chr5 125313840 125313958 -74316192 + L1MC5 LINE L1 6717 6877 -1118 2382 78 3 0 chr5 125313962 125314256 -74315894 + AluY SINE Alu 1 295 -16 929 243 189 0 chr5 125314284 125314622 -74315528 + L1M4 LINE L1 4864 5265 -881 279 0 0 0 chr5 125314684 125314715 -74315435 + (CA)n Simple_repeat Simple_repeat 2 32 0 327 369 37 25 chr5 125314781 125315022 -74315128 - MIR SINE MIR -16 246 3 449 230 20 0 chr5 125315688 125315788 -74314362 - L2 LINE L2 0 3313 3212 379 377 52 21 chr5 125315780 125316069 -74314081 + L2 LINE L2 1051 1348 -1966 * 286 344 65 50 chr5 125316555 125316935 -74313215 + L2 LINE L2 2742 3144 -169 2794 88 3 8 chr5 125316935 125317312 -74312838 + THE1C LTR MaLR 1 375 0 286 344 65 50 chr5 125317312 125317485 -74312665 + L2 LINE L2 3144 3313 0 23 33 0 0 chr5 125318626 125318656 -74311494 + AT_rich Low_complexity Low_complexity 1 30 0 210 171 0 0 chr5 125319132 125319173 -74310977 + (CA)n Simple_repeat Simple_repeat 2 42 0 321 298 10 0 chr5 125320674 125320778 -74309372 - MARNA DNA Mariner -24 562 458 568 189 90 0 chr5 125321394 125321516 -74308634 + AluSq/x SINE Alu 3 135 -178 544 272 31 36 chr5 125322810 125323005 -74307145 + Charlie8 DNA MER1_type 10 203 -2214 1630 190 10 10 chr5 125323609 125323899 -74306251 - AluJo SINE Alu -16 296 7 1484 220 21 12 chr5 125325363 125325695 -74304455 + MER58B DNA MER1_type 7 341 0 322 260 16 79 chr5 125325761 125325888 -74304262 - MER5A DNA MER1_type -28 161 43 282 277 32 84 chr5 125325764 125325919 -74304231 + MER5A DNA MER1_type 43 189 0 * 6125 194 12 47 chr5 125326396 125327719 -74302431 - L1MA4 LINE L1 -40 6260 4969 772 259 0 0 chr5 125327719 125327889 -74302261 - FRAM SINE Alu -7 169 1 6125 194 12 47 chr5 125327889 125329080 -74301070 - L1MA4 LINE L1 -1331 4969 3738 * 11377 239 50 28 chr5 125329073 125330864 -74299286 - L1 LINE L1 -992 6114 4364 1887 157 10 19 chr5 125330864 125331176 -74298974 - AluJb SINE Alu -2 310 2 11377 239 50 28 chr5 125331176 125332398 -74297752 - L1 LINE L1 -2742 4364 3170 1609 79 5 0 chr5 125332398 125332613 -74297537 - L1PA7 LINE L1 0 6154 5939 11377 239 50 28 chr5 125332613 125334496 -74295654 - L1 LINE L1 -3936 3170 1434 287 238 91 0 chr5 125334721 125334864 -74295286 + Charlie7 DNA MER1_type 2456 2611 -1 370 319 60 73 chr5 125335050 125335298 -74294852 + L3 LINE CR1 1328 1572 -5 25 31 0 0 chr5 125336084 125336116 -74294034 + AT_rich Low_complexity Low_complexity 1 32 0 289 245 28 57 chr5 125337240 125337346 -74292804 - MLT1A1 LTR MaLR -153 402 300 841 168 0 0 chr5 125337518 125337649 -74292501 + FLAM_C SINE Alu 1 131 -2 603 272 100 31 chr5 125338102 125338516 -74291634 + L1ME4a LINE L1 5439 5879 -242 202 384 10 0 chr5 125338595 125338694 -74291456 - L2 LINE L2 -34 3279 3180 2203 100 7 13 chr5 125338902 125339201 -74290949 + AluSx SINE Alu 2 298 -14 363 44 0 0 chr5 125339353 125339398 -74290752 + (CA)n Simple_repeat Simple_repeat 2 46 0 8660 173 16 10 chr5 125339423 125342162 -74287988 - L1MA4 LINE L1 -11 6289 3534 263 314 69 21 chr5 125342728 125342916 -74287234 + L2 LINE L2 3112 3308 -5 1911 194 91 26 chr5 125343210 125343670 -74286480 - LTR2B LTR ERV1 0 490 1 486 313 168 25 chr5 125345072 125345506 -74284644 - MLT1K LTR MaLR -17 571 76 1826 201 6 6 chr5 125345935 125346274 -74283876 - MLT1A1 LTR MaLR -26 339 1 1685 174 0 34 chr5 125346501 125346824 -74283326 - AluJo SINE Alu 0 313 1 2220 75 4 4 chr5 125346986 125347290 -74282860 - AluY SINE Alu 0 304 1 362 289 120 7 chr5 125349185 125349327 -74280823 - L3 LINE CR1 -349 1228 1071 386 287 0 20 chr5 125349339 125349440 -74280710 - L3 LINE CR1 -1049 528 430 1463 206 65 13 chr5 125350161 125350471 -74279679 + MLT1A1 LTR MaLR 5 330 -35 204 266 298 8 chr5 125350754 125350878 -74279272 + MIR SINE MIR 8 167 -95 1227 207 9 0 chr5 125352965 125353187 -74276963 - MER58A DNA MER1_type 0 224 1 890 269 52 0 chr5 125353524 125353736 -74276414 + MER58A DNA MER1_type 2 224 0 362 198 58 0 chr5 125353953 125354039 -74276111 - MER5C DNA MER1_type -201 123 33 244 298 191 14 chr5 125354053 125354194 -74275956 + MER5A DNA MER1_type 1 166 -23 * 396 262 0 39 chr5 125354115 125354218 -74275932 - MER5A DNA MER1_type -80 109 11 204 214 36 36 chr5 125354297 125354353 -74275797 - MIR SINE MIR -112 150 95 889 184 153 5 chr5 125356127 125356317 -74273833 + MER20 DNA MER1_type 1 218 -1 27 0 0 0 chr5 125356499 125356526 -74273624 + AT_rich Low_complexity Low_complexity 1 27 0 435 52 0 0 chr5 125357931 125357989 -74272161 + (CA)n Simple_repeat Simple_repeat 1 58 0 787 220 34 28 chr5 125358183 125358360 -74271790 - MER45A DNA AcHobo 0 178 1 792 170 0 0 chr5 125358734 125358875 -74271275 - L1MB3 LINE L1 -10 6173 6033 213 196 36 0 chr5 125359273 125359329 -74270821 + A-rich Low_complexity Low_complexity 1 58 0 427 283 9 32 chr5 125360370 125360618 -74269532 - MLT1J2 LTR MaLR -101 349 66 2387 71 0 0 chr5 125361013 125361307 -74268843 - AluY SINE Alu -17 294 1 348 327 0 0 chr5 125361368 125361472 -74268678 - MIR SINE MIR -6 256 153 228 303 0 13 chr5 125361493 125361569 -74268581 - LTR67 LTR ERVL -21 536 462 263 261 200 9 chr5 125361835 125361950 -74268200 + MIR SINE MIR 8 144 -118 1931 199 56 16 chr5 125361957 125362400 -74267750 - LOR1b LTR ERV1 0 461 1 12058 105 61 58 chr5 125362400 125364506 -74265644 - LOR1b-int LTR ERV1 0 8120 6009 3330 157 66 92 chr5 125364512 125365536 -74264614 - MER4-int LTR ERV1 -2228 4370 2350 7489 119 70 72 chr5 125365547 125366458 -74263692 - MER4-int LTR ERV1 -6254 1866 955 1887 160 3 0 chr5 125366458 125366746 -74263404 - AluJb SINE Alu -23 289 1 7489 119 70 72 chr5 125366746 125367139 -74263011 - MER4-int LTR ERV1 -7165 955 515 240 265 0 0 chr5 125367139 125367188 -74262962 - 5S rRNA rRNA -71 50 2 7489 119 70 72 chr5 125367188 125367506 -74262644 - MER4-int LTR ERV1 -7605 515 198 776 147 115 6 chr5 125367535 125367692 -74262458 - LOR1b-int LTR ERV1 -7752 368 195 1128 50 19 6 chr5 125367692 125367852 -74262298 + (TTTC)n Simple_repeat Simple_repeat 2 163 0 837 93 0 0 chr5 125367853 125367961 -74262189 - AluY SINE Alu -32 279 172 1030 212 5 15 chr5 125367961 125368164 -74261986 - LOR1b-int LTR ERV1 -7919 201 1 1827 158 153 15 chr5 125368164 125368569 -74261581 - LOR1b LTR ERV1 0 461 1 263 327 25 31 chr5 125369451 125369580 -74260570 - MIR SINE MIR -66 142 24 321 299 9 19 chr5 125370139 125370246 -74259904 - MIR SINE MIR -3 259 154 1845 181 3 0 chr5 125371397 125371695 -74258455 + AluJb SINE Alu 1 299 -13 409 282 158 45 chr5 125371732 125372037 -74258113 + L2 LINE L2 1327 1596 -1718 2559 68 0 0 chr5 125372037 125372346 -74257804 - AluY SINE Alu -2 309 1 409 282 158 45 chr5 125372346 125372589 -74257561 + L2 LINE L2 1596 1937 -1377 474 351 45 8 chr5 125372704 125372946 -74257204 + L2 LINE L2 2828 3078 -194 199 189 0 0 chr5 125373611 125373648 -74256502 - MIR SINE MIR -112 150 114 510 293 192 14 chr5 125374336 125374695 -74255455 + MLT1J LTR MaLR 85 507 -4 424 226 34 68 chr5 125375556 125375733 -74254417 - L2 LINE L2 -8 3305 3135 297 0 0 0 chr5 125376793 125376826 -74253324 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 12886 137 17 16 chr5 125376839 125379874 -74250276 - L1PA10 LINE L1 -16 6467 3427 1647 152 0 36 chr5 125379879 125380005 -74250145 - L1PA10 LINE L1 -3157 3304 3175 2017 145 0 0 chr5 125380005 125380313 -74249837 - AluSx SINE Alu 0 308 1 1647 152 0 36 chr5 125380313 125380514 -74249636 - L1PA10 LINE L1 -3286 3175 2988 3922 231 33 76 chr5 125380514 125380916 -74249234 - L1PA10 LINE L1 -4759 1702 1284 3450 15 0 0 chr5 125380916 125381312 -74248838 - L1PA2 LINE L1 -3 6152 5757 3922 231 33 76 chr5 125381312 125382438 -74247712 - L1PA10 LINE L1 -5177 1284 229 181 169 15 15 chr5 125382747 125382812 -74247338 + (TA)n Simple_repeat Simple_repeat 2 66 0 210 220 0 0 chr5 125383102 125383161 -74246989 + (CATA)n Simple_repeat Simple_repeat 2 60 0 373 266 71 49 chr5 125383686 125383870 -74246280 + MIR3 SINE MIR 4 191 -17 22 0 0 0 chr5 125384101 125384123 -74246027 + AT_rich Low_complexity Low_complexity 1 22 0 2041 157 31 30 chr5 125384315 125384870 -74245280 + MLT2A2 LTR ERVL 1 554 0 275 324 110 30 chr5 125384896 125385195 -74244955 - L2 LINE L2 -1059 2255 1933 426 48 16 32 chr5 125386143 125386205 -74243945 - U7 snRNA snRNA -1 62 2 308 197 0 13 chr5 125386309 125386385 -74243765 + (CATA)n Simple_repeat Simple_repeat 2 76 0 339 245 29 0 chr5 125386497 125386599 -74243551 - MLT1I LTR MaLR 0 409 305 418 342 45 14 chr5 125386634 125386856 -74243294 - MLT1I LTR MaLR -176 233 5 374 392 57 8 chr5 125386970 125387337 -74242813 - L2 LINE L2 -1983 1331 947 571 264 92 0 chr5 125387385 125387635 -74242515 - MLT1L LTR MaLR -6 609 337 292 163 163 35 chr5 125387834 125387920 -74242230 - MLT1L LTR MaLR -518 97 1 2159 139 119 13 chr5 125388284 125388671 -74241479 - MSTA LTR MaLR 0 428 1 188 262 0 0 chr5 125389028 125389070 -74241080 - L2 LINE L2 -75 3197 3156 378 0 0 0 chr5 125389723 125389765 -74240385 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1799 168 0 11 chr5 125389767 125390053 -74240097 - AluJb SINE Alu -29 283 1 2315 105 0 0 chr5 125390797 125391103 -74239047 - AluSq SINE Alu -7 306 1 303 71 0 0 chr5 125391622 125391664 -74238486 + (CA)n Simple_repeat Simple_repeat 1 42 0 245 244 12 37 chr5 125393398 125393480 -74236670 + GA-rich Low_complexity Low_complexity 4 83 0 2752 107 25 41 chr5 125396367 125396851 -74233299 - Tigger4(Zombi) DNA MER2_type 0 2731 2256 888 86 0 0 chr5 125396852 125396968 -74233182 - AluSx SINE Alu -3 309 194 938 115 14 0 chr5 125396969 125397108 -74233042 - AluSx SINE Alu -171 141 1 831 157 124 11 chr5 125397126 125397311 -74232839 - Tigger4(Zombi) DNA MER2_type -2525 206 1 339 94 47 106 chr5 125397311 125397348 -74232802 + MER46A DNA MER2_type 145 176 -60 725 258 94 11 chr5 125398736 125399003 -74231147 - MER113 DNA MER1_type? 0 521 233 1909 178 3 0 chr5 125399013 125399311 -74230839 - AluJo SINE Alu -13 299 1 315 49 0 0 chr5 125399347 125399388 -74230762 + (TG)n Simple_repeat Simple_repeat 2 42 0 249 218 23 23 chr5 125399393 125399480 -74230670 + (TA)n Simple_repeat Simple_repeat 1 87 0 327 203 0 0 chr5 125399493 125399562 -74230588 + (TA)n Simple_repeat Simple_repeat 2 70 0 798 146 29 6 chr5 125399636 125399807 -74230343 + L1MB8 LINE L1 6004 6178 0 203 79 26 0 chr5 125399974 125400012 -74230138 + (TTATA)n Simple_repeat Simple_repeat 5 43 0 265 235 10 10 chr5 125400389 125400491 -74229659 + CT-rich Low_complexity Low_complexity 3 104 0 2003 219 40 12 chr5 125400801 125401394 -74228756 - L1 LINE L1 -3313 2833 2224 5286 149 15 6 chr5 125401412 125402592 -74227558 + L1PA16 LINE L1 4973 6163 -3 1831 164 7 0 chr5 125402601 125402915 -74227235 + AluSx SINE Alu 1 316 0 22 35 0 0 chr5 125403221 125403250 -74226900 + AT_rich Low_complexity Low_complexity 1 29 0 29 60 0 0 chr5 125403322 125403372 -74226778 + AT_rich Low_complexity Low_complexity 1 50 0 944 307 177 20 chr5 125403656 125404266 -74225884 - L2 LINE L2 -2453 861 156 2036 136 4 0 chr5 125404634 125404934 -74225216 + AluSx SINE Alu 1 301 0 842 224 50 0 chr5 125405572 125405751 -74224399 - MER5A DNA MER1_type -1 188 1 2107 104 0 24 chr5 125406339 125406769 -74223381 + AluSx SINE Alu 1 423 0 363 155 0 0 chr5 125408695 125408794 -74221356 - AluS SINE Alu 0 322 224 368 256 33 0 chr5 125408984 125409105 -74221045 - L1ME4a LINE L1 -24 6097 5973 793 280 89 8 chr5 125409157 125409393 -74220757 + MIR SINE MIR 8 262 0 2121 130 72 17 chr5 125409557 125409902 -74220248 - THE1B LTR MaLR 0 364 1 10625 98 17 0 chr5 125409902 125411456 -74218694 - THE1B-int LTR MaLR 0 1580 1 2134 139 73 14 chr5 125411456 125411800 -74218350 - THE1B LTR MaLR 0 364 1 455 299 101 45 chr5 125412040 125412438 -74217712 - L1 LINE L1 -757 5389 4970 288 211 84 0 chr5 125412439 125412534 -74217616 - MER69 DNA AcHobo -263 2263 2161 378 211 0 0 chr5 125412578 125412654 -74217496 + MER69 DNA AcHobo 439 514 -2012 * 1332 228 14 48 chr5 125412653 125412884 -74217266 - MER69 DNA AcHobo -2187 339 123 1893 143 49 35 chr5 125412884 125413254 -74216896 - THE1C LTR MaLR 0 375 1 1332 228 14 48 chr5 125413254 125413373 -74216777 - MER69 DNA AcHobo -2403 123 1 687 231 15 15 chr5 125413723 125413918 -74216232 - L1MB8 LINE L1 -9 6169 5975 1729 118 71 47 chr5 125413918 125414241 -74215909 + THE1C LTR MaLR 1 335 -40 2174 121 47 16 chr5 125414241 125414605 -74215545 - THE1C LTR MaLR 0 375 1 1729 118 71 47 chr5 125414605 125414645 -74215505 + THE1C LTR MaLR 335 373 -2 2635 158 73 13 chr5 125414646 125415192 -74214958 - L1MB8 LINE L1 -198 5980 5402 409 191 0 0 chr5 125415666 125415750 -74214400 - MLT1D LTR MaLR -1 504 421 699 113 0 0 chr5 125416107 125416213 -74213937 - L1P LINE L1 -1910 4551 4446 5830 114 7 14 chr5 125416220 125417411 -74212739 - L1P3 LINE L1 -4392 2069 886 317 346 23 39 chr5 125418363 125418493 -74211657 - MIR3 SINE MIR 0 208 81 207 147 0 44 chr5 125419747 125419815 -74210335 + (TTA)n Simple_repeat Simple_repeat 2 66 0 545 267 10 14 chr5 125420213 125420409 -74209741 - MIR SINE MIR -52 210 19 2578 101 18 3 chr5 125422317 125422703 -74207447 - L1PA13 LINE L1 0 6163 5772 1977 134 10 17 chr5 125422703 125423001 -74207149 - AluSx SINE Alu -16 296 1 22 0 0 0 chr5 125423007 125423029 -74207121 + AT_rich Low_complexity Low_complexity 1 22 0 13532 188 25 21 chr5 125423033 125427800 -74202350 - L1PB1 LINE L1 -8 6859 2085 7478 35 1 3 chr5 125427800 125429320 -74200830 - L1PA5 LINE L1 -9 6145 4628 13532 188 25 21 chr5 125429320 125430068 -74200082 - L1PB1 LINE L1 -4782 2085 1341 1319 212 80 0 chr5 125430071 125430434 -74199716 - L1M3c LINE L1 -3037 4528 4137 1005 206 36 176 chr5 125430484 125430792 -74199358 - L1 LINE L1 -4492 3073 2820 543 115 0 0 chr5 125430792 125430870 -74199280 - AluY SINE Alu -17 294 217 1005 206 36 176 chr5 125430870 125431154 -74198996 - L1 LINE L1 -4745 2820 2498 640 218 19 114 chr5 125431168 125431315 -74198835 + L1ME1 LINE L1 5925 6038 -128 1911 175 0 0 chr5 125431315 125431612 -74198538 - AluJb SINE Alu -15 297 1 640 218 19 114 chr5 125431612 125431726 -74198424 + L1ME1 LINE L1 6038 6161 -5 1464 278 18 2 chr5 125431761 125432312 -74197838 - L1M3c LINE L1 -4648 2848 2289 1680 273 102 14 chr5 125432320 125432975 -74197175 - L1M3c LINE L1 -6311 1178 466 2260 103 7 0 chr5 125433160 125433452 -74196698 - AluSc SINE Alu -15 294 1 378 291 26 5 chr5 125433514 125433703 -74196447 - L1ME3 LINE L1 -293 5869 5677 270 81 0 0 chr5 125433765 125433802 -74196348 + (CA)n Simple_repeat Simple_repeat 2 38 0 409 263 95 40 chr5 125433886 125434350 -74195800 - L1ME3 LINE L1 -647 5595 5111 282 106 0 0 chr5 125434352 125434399 -74195751 + (TG)n Simple_repeat Simple_repeat 2 48 0 651 283 83 31 chr5 125434456 125434902 -74195248 - L1ME3 LINE L1 -1415 4731 2777 2205 94 7 0 chr5 125435042 125435330 -74194820 - AluSp SINE Alu -23 290 1 21 0 0 0 chr5 125435618 125435639 -74194511 + AT_rich Low_complexity Low_complexity 1 21 0 682 223 8 0 chr5 125435643 125435773 -74194377 + FLAM_A SINE Alu 2 132 -1 2120 119 3 3 chr5 125435814 125436109 -74194041 + AluSg SINE Alu 1 295 -15 2367 101 0 0 chr5 125436784 125437091 -74193059 + AluSg SINE Alu 4 310 0 459 0 0 0 chr5 125437091 125437142 -74193008 + (TA)n Simple_repeat Simple_repeat 2 52 0 31 76 0 0 chr5 125437786 125437852 -74192298 + AT_rich Low_complexity Low_complexity 1 66 0 2350 89 3 3 chr5 125438160 125438463 -74191687 - AluSx SINE Alu -9 303 1 288 139 0 0 chr5 125438463 125438506 -74191644 - Alu SINE Alu -255 44 2 227 150 33 100 chr5 125438777 125438837 -74191313 - L2 LINE L2 -3 3310 3255 852 134 8 15 chr5 125438965 125439099 -74191051 - FLAM_C SINE Alu 0 133 1 321 299 22 66 chr5 125439160 125439252 -74190898 - MIR SINE MIR -16 246 160 2118 92 7 59 chr5 125439252 125439555 -74190595 - AluSx SINE Alu -25 287 1 321 299 22 66 chr5 125439555 125439599 -74190551 - MIR SINE MIR -102 160 116 2085 129 7 0 chr5 125439731 125440026 -74190124 + AluSx SINE Alu 11 307 -5 25 31 0 0 chr5 125440064 125440096 -74190054 + AT_rich Low_complexity Low_complexity 1 32 0 307 232 134 12 chr5 125440256 125440338 -74189812 - MIR SINE MIR -166 96 5 1835 158 16 10 chr5 125441093 125441396 -74188754 - AluJo SINE Alu -7 305 1 245 333 111 0 chr5 125441411 125441501 -74188649 - MIR SINE MIR -132 130 31 2243 121 0 9 chr5 125441797 125442112 -74188038 + AluSx SINE Alu 1 312 0 1660 179 30 7 chr5 125442369 125442666 -74187484 + AluJb SINE Alu 1 304 -8 1902 167 0 20 chr5 125443580 125443885 -74186265 - AluJo SINE Alu -13 299 1 254 198 24 60 chr5 125443902 125443992 -74186158 - Alu SINE Alu -255 45 5 2321 103 5 77 chr5 125444143 125444354 -74185796 + LTR26B LTR ERV1 1 169 -362 2365 78 3 0 chr5 125444354 125444649 -74185501 + AluSx SINE Alu 11 306 -6 2321 103 5 77 chr5 125444649 125444853 -74185297 + LTR26B LTR ERV1 169 386 -145 567 152 0 0 chr5 125444851 125444943 -74185207 + THE1B LTR MaLR 194 285 -79 * 192 135 0 0 chr5 125445075 125445112 -74185038 + (CAGG)n Simple_repeat Simple_repeat 2 38 0 999 157 6 0 chr5 125445418 125445577 -74184573 + LTR26B LTR ERV1 372 531 0 382 230 37 74 chr5 125445669 125445804 -74184346 - MER110-int LTR ERV1 -3291 1356 1227 2359 73 0 0 chr5 125446058 125446345 -74183805 - AluY SINE Alu -9 302 16 1296 197 101 70 chr5 125446452 125446478 -74183672 + LTR48 LTR ERV1 1 25 -619 1467 160 110 39 chr5 125446478 125446760 -74183390 + AluJo SINE Alu 1 302 -10 1296 197 101 70 chr5 125446760 125446933 -74183217 + LTR48 LTR ERV1 25 191 -453 1653 110 0 18 chr5 125446933 125447160 -74182990 + AluSg/x SINE Alu 83 305 -5 1296 197 101 70 chr5 125447160 125447618 -74182532 + LTR48 LTR ERV1 191 644 0 312 310 58 0 chr5 125447660 125447747 -74182403 - MER110-int LTR ERV1 -3843 804 713 748 110 12 86 chr5 125447748 125447888 -74182262 + MLT1A1 LTR MaLR 1 129 -236 2542 64 0 16 chr5 125447888 125448200 -74181950 - AluSx SINE Alu -5 307 1 748 110 12 86 chr5 125448200 125448222 -74181928 + MLT1A1 LTR MaLR 129 151 -214 696 193 8 0 chr5 125448229 125448348 -74181802 + FLAM_A SINE Alu 3 122 -11 1098 160 38 9 chr5 125448379 125448592 -74181558 + MLT1A1 LTR MaLR 144 362 -3 559 248 13 13 chr5 125448592 125448749 -74181401 - MER110-int LTR ERV1 -3932 715 559 833 168 0 0 chr5 125448787 125448918 -74181232 - FLAM_A SINE Alu -2 131 1 1841 160 3 7 chr5 125449097 125449384 -74180766 + AluJb SINE Alu 1 286 -26 1021 197 75 81 chr5 125449417 125449772 -74180378 + MER110A LTR ERV1 156 491 0 1819 173 3 3 chr5 125449852 125450152 -74179998 - AluJo SINE Alu -12 300 1 381 179 0 13 chr5 125450339 125450417 -74179733 + L1MC1 LINE L1 6008 6084 -249 1436 124 88 4 chr5 125450418 125450668 -74179482 - MER4E LTR ERV1 -1 765 495 1177 65 0 0 chr5 125450668 125450807 -74179343 + AluSq/x SINE Alu 2 140 -173 297 100 0 0 chr5 125450820 125450870 -74179280 + Alu SINE Alu 251 300 -2 795 158 84 40 chr5 125450870 125451180 -74178970 - MER4B LTR ERV1 -258 505 1 1377 153 16 24 chr5 125451180 125451435 -74178715 + L1MC1 LINE L1 6081 6333 0 227 91 0 0 chr5 125451435 125451468 -74178682 + MER53 DNA DNA 26 58 -131 302 159 0 0 chr5 125451468 125451512 -74178638 + Alu SINE Alu 1 44 -258 1509 98 5 0 chr5 125451512 125451715 -74178435 + AluSg/x SINE Alu 90 293 -17 545 88 109 68 chr5 125451715 125451800 -74178350 - MER53 DNA DNA -35 154 59 1919 154 3 7 chr5 125451800 125452093 -74178057 + AluSx SINE Alu 1 292 -20 545 88 109 68 chr5 125452093 125452154 -74177996 - MER53 DNA DNA -130 59 2 341 172 0 0 chr5 125452395 125452459 -74177691 - U3 snRNA snRNA -149 68 5 2367 86 3 0 chr5 125452818 125453121 -74177029 + AluSx SINE Alu 1 304 -8 364 282 19 68 chr5 125453587 125453793 -74176357 + MLT1L LTR MaLR 206 401 -214 694 129 0 86 chr5 125453851 125453991 -74176159 - FLAM_A SINE Alu -4 138 11 76 12 0 0 chr5 125453995 125454078 -74176072 + AT_rich Low_complexity Low_complexity 1 83 0 22 0 0 0 chr5 125454119 125454141 -74176009 + AT_rich Low_complexity Low_complexity 1 22 0 283 75 5 0 chr5 125454442 125454490 -74175660 - L1MB8 LINE L1 -2 6182 6131 209 364 155 16 chr5 125455323 125455820 -74174330 + L2 LINE L2 1843 2408 -906 2444 96 3 0 chr5 125455894 125456206 -74173944 - AluSq SINE Alu 0 313 1 652 162 26 17 chr5 125456395 125456512 -74173638 - FLAM_C SINE Alu -15 118 1 2402 68 3 0 chr5 125457078 125457371 -74172779 + AluY SINE Alu 1 294 -17 467 164 0 0 chr5 125457627 125457700 -74172450 + AluJ/FLAM SINE Alu 1 73 -239 351 27 82 0 chr5 125457731 125457804 -74172346 + (TA)n Simple_repeat Simple_repeat 2 80 0 205 75 50 0 chr5 125660265 125660305 -73969845 + (TA)n Simple_repeat Simple_repeat 2 43 0 4647 162 14 22 chr5 125660323 125661275 -73968875 + L1MB3 LINE L1 5236 6180 -3 576 279 62 19 chr5 125663365 125663573 -73966577 + MIR SINE MIR 28 244 -18 3613 83 14 2 chr5 125665175 125665668 -73964482 + L1PA10 LINE L1 5655 6153 -15 26 0 0 0 chr5 125667014 125667040 -73963110 + AT_rich Low_complexity Low_complexity 1 26 0 1956 151 3 17 chr5 125667174 125667472 -73962678 + AluSx SINE Alu 1 294 -18 1797 157 58 25 chr5 125669394 125669757 -73960393 - THE1C LTR MaLR 0 375 1 628 338 65 22 chr5 125670593 125670993 -73959157 - LTR16C LTR ERVL -39 452 36 553 258 90 18 chr5 125671158 125671325 -73958825 - MIR SINE MIR -12 250 72 2332 108 0 9 chr5 125671604 125671919 -73958231 - AluSx SINE Alu 0 312 1 216 158 0 0 chr5 125672866 125672904 -73957246 + (CA)n Simple_repeat Simple_repeat 1 38 0 342 0 0 0 chr5 125673235 125673273 -73956877 + (CA)n Simple_repeat Simple_repeat 1 38 0 2208 106 111 18 chr5 125673884 125674333 -73955817 + LTR14B LTR ERVK 1 608 0 2392 114 0 0 chr5 125674362 125674669 -73955481 - AluSg SINE Alu -3 307 1 463 304 93 109 chr5 125675070 125675501 -73954649 + L2 LINE L2 2830 3253 -19 734 210 16 5 chr5 125676630 125676816 -73953334 + MER53 DNA DNA 2 189 0 338 210 0 219 chr5 125677794 125678013 -73952137 + MIR SINE MIR 90 260 -2 290 230 70 40 chr5 125679252 125679352 -73950798 + MIR SINE MIR 145 247 -15 307 282 78 46 chr5 125680665 125680949 -73949201 + L1ME4a LINE L1 5731 6023 -98 245 302 13 31 chr5 125681049 125681274 -73948876 + L1M4 LINE L1 4204 4424 -1722 605 254 37 49 chr5 125682818 125683062 -73947088 - MLT1J2 LTR MaLR -209 241 1 488 275 179 34 chr5 125683192 125683516 -73946634 - MLT1L LTR MaLR -206 409 39 570 320 81 22 chr5 125683685 125684091 -73946059 + L1ME LINE L1 2335 2764 -3382 503 229 93 27 chr5 125684115 125684447 -73945703 + L1ME LINE L1 2897 3250 -2896 364 169 22 22 chr5 125684741 125684830 -73945320 + L1P3 LINE L1 1 89 -5786 2843 89 20 10 chr5 125684831 125685235 -73944915 + L1PA10 LINE L1 5761 6168 0 391 306 68 0 chr5 125685333 125685598 -73944552 + L1ME LINE L1 3663 3945 -2201 666 321 85 35 chr5 125685632 125686034 -73944116 + L1ME LINE L1 4099 4520 -1626 275 264 49 14 chr5 125686124 125686268 -73943882 + L1ME LINE L1 5717 5865 -297 2129 140 0 3 chr5 125686719 125687033 -73943117 + AluSq SINE Alu 1 313 0 279 299 0 0 chr5 125688273 125688350 -73941800 + CT-rich Low_complexity Low_complexity 3 79 0 222 236 0 55 chr5 125690233 125690288 -73939862 - L2 LINE L2 -2 3270 3219 370 243 85 79 chr5 125690594 125690783 -73939367 - L2 LINE L2 0 3313 3124 462 162 43 34 chr5 125690783 125690900 -73939250 + MER53 DNA DNA 1 118 -71 * 640 112 26 26 chr5 125690899 125691015 -73939135 + MER53 DNA DNA 74 189 0 216 135 0 0 chr5 125691501 125691538 -73938612 + (CA)n Simple_repeat Simple_repeat 2 38 0 2360 65 0 53 chr5 125692457 125692778 -73937372 + AluY SINE Alu 1 304 -7 2193 43 0 0 chr5 125692778 125693033 -73937117 + AluY SINE Alu 42 296 -15 1662 135 21 77 chr5 125693722 125694048 -73936102 - AluJo SINE Alu 0 312 5 292 161 21 86 chr5 125694933 125695026 -73935124 - L1MC5 LINE L1 -64 7897 7811 957 240 68 40 chr5 125695108 125695562 -73934588 - L1MC5 LINE L1 -184 7777 7311 988 241 87 4 chr5 125695563 125695816 -73934334 - L2 LINE L2 -550 2764 2491 1817 219 20 155 chr5 125696353 125697070 -73933080 + L1MD1 LINE L1 3283 3900 -2246 517 181 21 0 chr5 125697070 125697164 -73932986 + FLAM_A SINE Alu 21 116 -26 1817 219 20 155 chr5 125697164 125697481 -73932669 + L1MD1 LINE L1 3900 4258 -1888 393 75 0 0 chr5 125697481 125697534 -73932616 + (GGA)n Simple_repeat Simple_repeat 2 54 0 270 231 77 10 chr5 125697588 125697692 -73932458 + L1MD1 LINE L1 4273 4383 -1763 1022 189 0 21 chr5 125697694 125697884 -73932266 + AluJo SINE Alu 1 186 -126 2595 171 117 8 chr5 125697884 125698481 -73931669 + L1MD1 LINE L1 5380 6041 -201 14802 152 23 7 chr5 125698519 125704792 -73925358 + L1MA2 LINE L1 1347 7723 0 255 348 9 45 chr5 125705090 125705202 -73924948 - L3 LINE CR1 -79 1498 1391 827 278 31 21 chr5 125705281 125705572 -73924578 - MLT1I LTR MaLR 0 409 116 1607 153 21 38 chr5 125705633 125705920 -73924230 + AluJo SINE Alu 1 282 -30 2087 98 25 0 chr5 125707136 125707461 -73922689 - AluSx SINE Alu 0 332 1 1050 353 110 7 chr5 125709649 125710205 -73919945 - L3 LINE CR1 -16 1561 949 205 154 103 0 chr5 125710446 125710485 -73919665 - L2 LINE L2 0 3313 3271 202 328 35 19 chr5 125710906 125711019 -73919131 + MIR SINE MIR 2 117 -91 23 0 0 0 chr5 125711377 125711400 -73918750 + AT_rich Low_complexity Low_complexity 1 23 0 327 338 7 22 chr5 125711905 125712044 -73918106 + MIR SINE MIR 8 144 -118 594 258 38 6 chr5 125712075 125712234 -73917916 + MIR SINE MIR 77 240 -22 255 61 0 0 chr5 125712244 125712277 -73917873 + (CAT)n Simple_repeat Simple_repeat 3 35 0 237 244 0 0 chr5 125712300 125712345 -73917805 + L2 LINE L2 3211 3255 -17 556 204 0 0 chr5 125712621 125712724 -73917426 + U13 snRNA snRNA 1 103 -1 24 0 0 0 chr5 125713634 125713658 -73916492 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 125714729 125714758 -73915392 + AT_rich Low_complexity Low_complexity 1 29 0 3102 42 3 0 chr5 125717075 125717453 -73912697 - L1PA4 LINE L1 -7 6148 5770 41415 44 4 1 chr5 125717465 125723599 -73906551 - L1HS LINE L1 0 6155 7 1787 193 26 81 chr5 125723697 125723956 -73906194 + MER34B LTR ERV1 5 224 -341 2176 123 3 0 chr5 125723956 125724256 -73905894 + AluSp SINE Alu 1 301 -12 1787 193 26 81 chr5 125724256 125724503 -73905647 + MER34B LTR ERV1 224 483 -82 1509 212 77 31 chr5 125724503 125724918 -73905232 - MER57B LTR ERV1 0 434 1 452 169 37 75 chr5 125724920 125725089 -73905061 - MER57B-int LTR ERV1 -1 7536 6973 1198 278 32 67 chr5 125726822 125727700 -73902450 - MER57B-int LTR ERV1 -1343 6194 2145 1455 209 4 91 chr5 125727709 125728206 -73901944 - MER57B-int LTR ERV1 -1775 5762 5309 326 289 39 39 chr5 125728995 125729151 -73900999 - MER57B-int LTR ERV1 -4479 3947 3792 315 392 6 0 chr5 125729458 125729616 -73900534 - MER57B-int LTR ERV1 -4094 2707 2549 5859 185 25 27 chr5 125729668 125731062 -73899088 - L1M1 LINE L1 -4065 1263 16 280 139 0 165 chr5 125731194 125731230 -73898920 - MER57B-int LTR ERV1 -4387 3369 3351 2195 105 17 0 chr5 125731230 125731524 -73898626 - AluSq SINE Alu -14 299 1 280 139 0 165 chr5 125731524 125731566 -73898584 - MER57B-int LTR ERV1 -4405 3351 3304 592 297 18 12 chr5 125733644 125733908 -73896242 - MER57B-int LTR ERV1 -7239 298 3 1456 207 15 29 chr5 125733912 125734255 -73895895 - MER57B LTR ERV1 0 434 97 334 191 48 24 chr5 125734312 125734396 -73895754 + MER34C LTR ERV1 500 585 0 287 243 86 57 chr5 125734668 125734808 -73895342 + MER103 DNA DNA 22 165 -1 676 313 30 13 chr5 125735818 125736214 -73893936 - MARNA DNA Mariner -59 527 125 2743 75 5 10 chr5 125736509 125736896 -73893254 + L1PA8 LINE L1 5786 6170 -2 204 291 101 13 chr5 125737195 125737274 -73892876 + L2 LINE L2 3199 3284 -29 279 303 51 63 chr5 125737553 125737728 -73892422 + MLT1J LTR MaLR 4 176 -335 2334 162 53 5 chr5 125738028 125738459 -73891691 - LTR32 LTR ERVL -5 466 15 457 147 0 0 chr5 125738439 125738514 -73891636 - LTR32 LTR ERVL -383 88 14 * 2042 238 13 29 chr5 125739310 125739835 -73890315 + LTR40a LTR ERVL 3 519 0 2133 98 17 7 chr5 125741809 125742104 -73888046 + AluY SINE Alu 1 298 -13 1699 108 0 4 chr5 125742561 125742833 -73887317 + L1PA8 LINE L1 5905 6172 0 1075 130 5 22 chr5 125742978 125743163 -73886987 - THE1B LTR MaLR 0 364 183 201 232 18 36 chr5 125744222 125744278 -73885872 + MIR3 SINE MIR 103 157 -51 1103 258 62 54 chr5 125744281 125744765 -73885385 - LTR33A LTR ERVL -33 490 3 180 0 0 0 chr5 125746074 125746094 -73884056 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 324 309 15 37 chr5 125747148 125747284 -73882866 + MER5B DNA MER1_type 1 133 -45 376 267 17 87 chr5 125747341 125747513 -73882637 - L3 LINE CR1 -105 1472 1313 322 306 174 58 chr5 125747526 125748048 -73882102 + L3 LINE CR1 678 1260 -317 2136 143 98 15 chr5 125748389 125748788 -73881362 - MSTB1 LTR MaLR 0 432 1 537 295 45 53 chr5 125749005 125749472 -73880678 - L1M4 LINE L1 -1010 5136 4671 542 154 91 0 chr5 125749472 125749582 -73880568 + L1MB1 LINE L1 6049 6168 0 537 295 45 53 chr5 125749582 125749840 -73880310 - L1M4 LINE L1 -1475 4671 4412 272 283 162 25 chr5 125750198 125750396 -73879754 + L3 LINE CR1 1344 1568 -9 342 193 9 37 chr5 125750926 125751035 -73879115 + (TATG)n Simple_repeat Simple_repeat 3 108 0 200 269 0 15 chr5 125751044 125751111 -73879039 + (TATATG)n Simple_repeat Simple_repeat 6 71 0 306 0 0 0 chr5 125752427 125752461 -73877689 + (TTA)n Simple_repeat Simple_repeat 2 35 0 3387 101 20 9 chr5 125753048 125753591 -73876559 + L1PB2 LINE L1 5596 6144 -7 306 234 26 78 chr5 125755106 125755260 -73874890 - L1MC5 LINE L1 -201 7760 7615 198 157 157 0 chr5 125755955 125756006 -73874144 + MIR SINE MIR 81 139 -123 388 222 19 0 chr5 125756428 125756536 -73873614 + GA-rich Low_complexity Low_complexity 3 112 0 1022 220 0 11 chr5 125757444 125757630 -73872520 - MER5A DNA MER1_type -5 184 1 236 257 27 40 chr5 125758198 125758272 -73871878 - MIR SINE MIR -34 228 156 939 173 7 0 chr5 125758386 125758536 -73871614 + FRAM SINE Alu 2 152 -14 190 340 30 10 chr5 125758691 125758791 -73871359 + L3 LINE CR1 1433 1534 -43 2364 49 0 49 chr5 125759208 125759515 -73870635 - AluY SINE Alu -18 293 2 28 0 0 0 chr5 125759566 125759594 -73870556 + AT_rich Low_complexity Low_complexity 1 28 0 291 268 12 24 chr5 125759660 125759742 -73870408 + MIR SINE MIR 25 105 -157 576 258 33 50 chr5 125759853 125760035 -73870115 + MIR SINE MIR 41 219 -43 262 343 77 7 chr5 125760874 125761017 -73869133 - MIR3 SINE MIR -3 205 53 2140 151 33 41 chr5 125761783 125762332 -73867818 + MLT2A2 LTR ERVL 1 553 -1 337 312 28 35 chr5 125762775 125762916 -73867234 + MIR3 SINE MIR 6 145 -63 366 172 5 0 chr5 125764537 125764621 -73865529 - HsTC2 DNA Tc2 -1811 87 2 2231 194 15 9 chr5 125764674 125765132 -73865018 - MER65C LTR ERV1 0 461 1 299 78 20 0 chr5 125765301 125765352 -73864798 - L1PB2 LINE L1 -3 6205 6154 15444 177 10 3 chr5 125765371 125769313 -73860837 - L1PB2 LINE L1 -126 6082 2116 1348 146 33 3 chr5 125769304 125769591 -73860559 + L1PBa LINE L1 1801 2079 -4784 * 540 125 0 0 chr5 125769574 125769662 -73860488 + L1PBa LINE L1 2786 2873 -3990 * 3794 156 45 47 chr5 125769661 125770199 -73859951 - L1PB2 LINE L1 -4138 2065 1528 761 62 0 26 chr5 125770199 125770312 -73859838 + AluY SINE Alu 190 299 -12 3794 156 45 47 chr5 125770312 125771333 -73858817 - L1PB2 LINE L1 -4675 1528 442 288 170 0 0 chr5 125772767 125772820 -73857330 + GA-rich Low_complexity Low_complexity 2 54 0 261 311 76 0 chr5 125772982 125773114 -73857036 - L1M4 LINE L1 -1968 4178 4037 3241 105 40 10 chr5 125773198 125773678 -73856472 + L1PA10 LINE L1 3680 4177 -1969 1805 156 0 0 chr5 125773678 125773948 -73856202 + AluSx SINE Alu 5 274 -38 3241 105 40 10 chr5 125773948 125773963 -73856187 + L1PA10 LINE L1 4177 4190 -1956 360 117 39 13 chr5 125773967 125774044 -73856106 + GA-rich Low_complexity Low_complexity 3 81 0 7063 137 20 0 chr5 125774046 125776075 -73854075 + L1PA10 LINE L1 4147 6163 -5 269 119 85 0 chr5 125776087 125776146 -73854004 - L1M4 LINE L1 -2206 3940 3877 1653 187 24 0 chr5 125776514 125776803 -73853347 - AluJb SINE Alu -16 296 1 283 232 62 70 chr5 125776964 125777223 -73852927 - L1M4 LINE L1 -2921 3225 2969 22 35 0 0 chr5 125777259 125777288 -73852862 + AT_rich Low_complexity Low_complexity 1 29 0 3706 99 19 109 chr5 125777635 125778332 -73851818 - MER51A LTR ERV1 0 634 1 666 235 46 32 chr5 125778512 125778729 -73851421 - L1ME2 LINE L1 -23 6141 5922 2439 71 0 0 chr5 125778730 125779026 -73851124 - AluY SINE Alu -13 298 3 749 180 0 0 chr5 125779088 125779210 -73850940 - FAM SINE Alu -63 122 1 1573 232 81 8 chr5 125779217 125779678 -73850472 - L1ME2 LINE L1 -345 5819 5305 47 19 0 0 chr5 125780912 125780966 -73849184 + AT_rich Low_complexity Low_complexity 1 54 0 469 204 131 110 chr5 125781029 125781220 -73848930 + MER58C DNA MER1_type 21 215 0 1473 158 58 17 chr5 125782232 125782524 -73847626 + MER68 LTR ERV1 2 305 -257 399 56 53 0 chr5 125782908 125782973 -73847177 + L1P1 LINE L1 5700 5771 -384 6416 87 16 2 chr5 125783268 125784666 -73845484 + L1PA11 LINE L1 4766 6173 -1 883 244 42 27 chr5 125784674 125784987 -73845163 + LTR16A LTR ERVL 91 443 -7 672 281 21 50 chr5 125786288 125786530 -73843620 + MIR SINE MIR 3 237 -25 199 251 56 70 chr5 125786580 125786682 -73843468 + MIR SINE MIR 51 150 -64 455 291 30 59 chr5 125786763 125786966 -73843184 - MIR SINE MIR -25 237 41 263 304 10 29 chr5 125787400 125787502 -73842648 + MER119 DNA MER1_type 4 103 -480 409 254 44 0 chr5 125787520 125787634 -73842516 + MER119 DNA MER1_type 460 578 -5 1477 163 39 35 chr5 125787673 125787956 -73842194 - AluJo SINE Alu -28 284 1 3118 58 10 5 chr5 125788166 125788577 -73841573 - L1PA5 LINE L1 0 6154 5742 262 288 235 39 chr5 125788774 125788927 -73841223 - L2 LINE L2 -25 3288 3106 763 297 130 32 chr5 125789296 125789734 -73840416 - L2 LINE L2 -588 2726 2246 1201 191 9 5 chr5 125789904 125790119 -73840031 + MER58A DNA MER1_type 1 216 -8 404 298 31 38 chr5 125790287 125790492 -73839658 - MIR SINE MIR -20 242 7 33 0 0 0 chr5 125792071 125792104 -73838046 + AT_rich Low_complexity Low_complexity 1 33 0 1993 205 32 74 chr5 125792170 125792794 -73837356 + L1MC4 LINE L1 7445 8042 0 215 219 141 16 chr5 125794495 125794559 -73835591 + L2 LINE L2 3201 3272 0 772 232 119 40 chr5 125794642 125794944 -73835206 - MER46C DNA MER2_type 0 338 13 345 24 0 0 chr5 125796153 125796195 -73833955 + (CA)n Simple_repeat Simple_repeat 2 43 0 217 365 42 0 chr5 125796773 125796869 -73833281 + MIR3 SINE MIR 88 187 -21 2096 126 26 0 chr5 125796888 125797190 -73832960 - AluSq SINE Alu 0 313 4 251 246 66 82 chr5 125798070 125798192 -73831958 - MER5B DNA MER1_type -8 170 51 210 222 0 0 chr5 125798833 125798887 -73831263 + GA-rich Low_complexity Low_complexity 4 57 0 341 167 73 50 chr5 125799506 125799586 -73830564 + MIR SINE MIR 31 111 -97 928 202 138 74 chr5 125799802 125800222 -73829928 + LTR37B LTR ERV1 22 468 0 279 252 50 43 chr5 125800822 125800961 -73829189 + HAL1 LINE L1 2246 2385 -122 23 33 0 0 chr5 125801019 125801049 -73829101 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 125801466 125801487 -73828663 + AT_rich Low_complexity Low_complexity 1 21 0 225 204 0 0 chr5 125802022 125802066 -73828084 + A-rich Low_complexity Low_complexity 1 44 0 650 227 69 25 chr5 125802129 125802332 -73827818 + L2 LINE L2 681 892 -2422 21 36 0 0 chr5 125802349 125802377 -73827773 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 125802669 125802692 -73827458 + AT_rich Low_complexity Low_complexity 1 23 0 374 316 139 14 chr5 125803817 125804032 -73826118 + MIR SINE MIR 21 262 0 28 0 0 0 chr5 125805059 125805087 -73825063 + AT_rich Low_complexity Low_complexity 1 28 0 4680 39 4 0 chr5 125805257 125805819 -73824331 + L1PA5 LINE L1 5583 6146 -8 22 0 0 0 chr5 125805822 125805844 -73824306 + AT_rich Low_complexity Low_complexity 1 22 0 522 301 154 20 chr5 125806176 125806863 -73823287 + HAL1b LINE L1 58 836 -512 544 343 54 38 chr5 125806987 125807360 -73822790 + L1MEc LINE L1 30 408 -5988 305 238 133 10 chr5 125807410 125807567 -73822583 + MLT1H1 LTR MaLR 249 447 -108 829 245 11 5 chr5 125808112 125808296 -73821854 - HERVL68 LTR ERVL -1431 1606 1422 1607 143 32 47 chr5 125808603 125808906 -73821244 - AluJb SINE Alu 0 305 7 6320 120 194 89 chr5 125809306 125810841 -73819309 - pTR5 LTR ERV1 0 2438 743 1261 104 36 0 chr5 125811741 125811933 -73818217 - L1PA13 LINE L1 -5 6158 5960 242 178 22 0 chr5 125813771 125813816 -73816334 + MER57B LTR ERV1 323 368 -66 29 28 0 0 chr5 125813816 125813852 -73816298 + AT_rich Low_complexity Low_complexity 1 36 0 1821 133 0 0 chr5 125814120 125814390 -73815760 + AluSx SINE Alu 41 310 -2 1204 186 60 11 chr5 125814763 125815032 -73815118 - L1MB7 LINE L1 -10 6174 5893 7178 226 91 18 chr5 125815035 125817235 -73812915 - L1M4c LINE L1 -4635 2324 11 1063 181 65 0 chr5 125817728 125817927 -73812223 - Tigger2a DNA MER2_type 0 444 233 1197 153 16 76 chr5 125818215 125818464 -73811686 - Tigger2a DNA MER2_type -200 234 1 385 274 26 26 chr5 125819038 125819155 -73810995 + L2 LINE L2 3197 3313 0 204 259 17 17 chr5 125819156 125819214 -73810936 + (TAAG)n Simple_repeat Simple_repeat 3 60 0 226 286 0 0 chr5 125819633 125819682 -73810468 + polypurine Low_complexity Low_complexity 3 51 0 43 20 0 0 chr5 125819908 125819958 -73810192 + AT_rich Low_complexity Low_complexity 1 50 0 2282 81 0 3 chr5 125819965 125820261 -73809889 - AluY SINE Alu -15 296 2 5308 55 0 0 chr5 125821080 125821740 -73808410 + L1PA7 LINE L1 5488 6147 -7 6186 159 32 7 chr5 125821964 125823973 -73806177 + L1PA16 LINE L1 4102 6157 -9 22 35 0 0 chr5 125823976 125824005 -73806145 + AT_rich Low_complexity Low_complexity 1 29 0 435 83 0 0 chr5 125824626 125824686 -73805464 + (CA)n Simple_repeat Simple_repeat 1 60 0 403 187 0 27 chr5 125826016 125826091 -73804059 + L2 LINE L2 3240 3312 -1 1435 301 109 47 chr5 125826919 125827812 -73802338 + L2 LINE L2 1973 2920 -394 419 220 101 9 chr5 125827847 125827956 -73802194 - MIR SINE MIR -79 183 65 209 216 0 20 chr5 125828089 125828140 -73802010 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 22 0 0 0 chr5 125828578 125828600 -73801550 + AT_rich Low_complexity Low_complexity 1 22 0 2168 100 0 13 chr5 125828865 125829165 -73800985 - AluSg SINE Alu -12 298 3 505 167 123 43 chr5 125829357 125829495 -73800655 + MER58C DNA MER1_type 66 214 -1 247 241 35 0 chr5 125831016 125831074 -73799076 + GA-rich Low_complexity Low_complexity 3 62 0 460 136 207 77 chr5 125831424 125831593 -73798557 + LTR37A LTR ERV1 18 208 -218 1206 150 0 0 chr5 125831911 125832091 -73798059 + AluSg/x SINE Alu 120 299 -13 221 323 0 0 chr5 125832299 125832364 -73797786 + MIR3 SINE MIR 114 178 -30 264 319 26 35 chr5 125832943 125833056 -73797094 - L2 LINE L2 -4 3309 3198 982 24 0 16 chr5 125833372 125833499 -73796651 + (GAAA)n Simple_repeat Simple_repeat 4 128 0 298 314 220 5 chr5 125835980 125836171 -73793979 + MIR SINE MIR 20 251 -11 45 55 0 0 chr5 125837468 125837541 -73792609 + AT_rich Low_complexity Low_complexity 1 73 0 292 307 219 10 chr5 125838357 125838549 -73791601 + MIR SINE MIR 20 251 -11 553 263 54 31 chr5 125839257 125839360 -73790790 + L1ME4a LINE L1 5852 5951 -170 2136 119 3 13 chr5 125839360 125839671 -73790479 + AluSx SINE Alu 1 308 -4 553 263 54 31 chr5 125839671 125839826 -73790324 + L1ME4a LINE L1 5951 6116 -5 21 36 0 0 chr5 125840348 125840376 -73789774 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr5 125840405 125840441 -73789709 + AT_rich Low_complexity Low_complexity 1 36 0 296 56 0 0 chr5 125841459 125841495 -73788655 - tRNA-Glu-GAG tRNA tRNA -38 37 2 1660 138 4 0 chr5 125841600 125841876 -73788274 - L1MA4 LINE L1 -11 6289 6013 231 346 39 37 chr5 125841902 125842095 -73788055 + MIR3 SINE MIR 10 200 -62 300 328 74 5 chr5 125843188 125843377 -73786773 + L1MEd LINE L1 600 801 -5318 233 277 210 26 chr5 125843420 125843615 -73786535 + L1ME LINE L1 5612 5842 -328 23 0 0 0 chr5 125843734 125843757 -73786393 + AT_rich Low_complexity Low_complexity 1 23 0 1970 219 52 50 chr5 125843874 125844413 -73785737 + MLT1F LTR MaLR 3 542 0 283 330 78 0 chr5 125844721 125844824 -73785326 - MIR3 SINE MIR -9 199 89 773 248 0 19 chr5 125845764 125845978 -73784172 + L1ME4a LINE L1 4702 4911 -1235 868 219 0 0 chr5 125846007 125846167 -73783983 - FRAM SINE Alu -17 159 1 944 224 88 30 chr5 125846178 125846585 -73783565 + L1MC5 LINE L1 7477 7907 -54 258 256 56 0 chr5 125846646 125846736 -73783414 + L1ME4a LINE L1 5773 5867 -254 4379 198 79 25 chr5 125846777 125848404 -73781746 + L1MCb LINE L1 3 1723 -4841 856 221 0 6 chr5 125848404 125848562 -73781588 + Tigger1 DNA MER2_type 1 157 -2261 * 1297 165 0 14 chr5 125848553 125848771 -73781379 + Tigger1 DNA MER2_type 2204 2418 0 493 114 25 0 chr5 125848771 125848850 -73781300 + L1MCb LINE L1 1722 1802 -4762 * 1630 165 35 10 chr5 125848849 125848872 -73781278 + L1MC2 LINE L1 5185 5206 -1138 8939 38 3 2 chr5 125848872 125849942 -73780208 + MER11C LTR ERVK 1 1071 0 1630 165 35 10 chr5 125849942 125850899 -73779251 + L1MC2 LINE L1 5206 6326 -18 281 152 167 0 chr5 125851004 125851070 -73779080 + L1ME4a LINE L1 6017 6093 -28 21 0 0 0 chr5 125851537 125851558 -73778592 + AT_rich Low_complexity Low_complexity 1 21 0 1357 198 12 4 chr5 125852217 125852470 -73777680 + AluJo SINE Alu 43 297 -15 26 0 0 0 chr5 125852818 125852844 -73777306 + AT_rich Low_complexity Low_complexity 1 26 0 1782 176 7 16 chr5 125856607 125856913 -73773237 + AluJo SINE Alu 3 305 -7 213 94 0 0 chr5 125856922 125856954 -73773196 + (A)n Simple_repeat Simple_repeat 1 32 0 2695 153 17 73 chr5 125857021 125857494 -73772656 + L1MB1 LINE L1 5602 6035 -133 2337 88 0 3 chr5 125857494 125857791 -73772359 + AluSx SINE Alu 1 296 -16 2695 153 17 73 chr5 125857791 125857918 -73772232 + L1MB1 LINE L1 6035 6168 0 195 343 105 0 chr5 125858220 125858325 -73771825 - L2 LINE L2 -13 3300 3185 4802 209 52 94 chr5 125859434 125860573 -73769577 + L1MA5 LINE L1 1 1187 -6021 1981 124 3 3 chr5 125860573 125860855 -73769295 + AluSx SINE Alu 1 282 -30 4802 209 52 94 chr5 125860855 125861185 -73768965 + L1MA5 LINE L1 1187 1529 -5679 365 250 24 0 chr5 125861185 125861269 -73768881 + U13 snRNA snRNA 19 104 0 4802 209 52 94 chr5 125861269 125862390 -73767760 + L1MA5 LINE L1 1529 3405 -3803 1226 230 0 9 chr5 125862391 125862621 -73767529 + MER8 DNA MER2_type 10 237 -2 6973 176 49 18 chr5 125862623 125864595 -73765555 + L1MA5 LINE L1 3396 5405 -1803 1673 158 52 8 chr5 125864595 125864939 -73765211 - MSTB LTR MaLR 0 426 3 6325 121 54 61 chr5 125864941 125865334 -73764816 + L1MA5 LINE L1 5401 5795 -1567 2279 90 0 10 chr5 125865334 125865634 -73764516 + AluSc SINE Alu 1 297 -12 6325 121 54 61 chr5 125865634 125866256 -73763894 + L1MA5 LINE L1 5795 6420 -942 2072 119 3 19 chr5 125866256 125866574 -73763576 + AluSq SINE Alu 1 313 0 6325 121 54 61 chr5 125866574 125867511 -73762639 + L1MA5 LINE L1 6420 7360 -2 297 0 0 0 chr5 125867949 125867982 -73762168 + (A)n Simple_repeat Simple_repeat 1 33 0 1772 166 10 7 chr5 125868334 125868630 -73761520 - AluJo SINE Alu -15 297 1 248 314 134 17 chr5 125868754 125868993 -73761157 - L1ME LINE L1 -589 5532 5266 876 318 95 24 chr5 125869113 125869614 -73760536 + L2 LINE L2 2750 3313 0 2531 143 13 67 chr5 125869976 125870055 -73760095 + MSTC LTR MaLR 5 87 -341 2343 73 0 17 chr5 125870055 125870356 -73759794 + AluY SINE Alu 1 296 -15 2531 143 13 67 chr5 125870356 125870724 -73759426 + MSTC LTR MaLR 87 428 0 263 280 80 13 chr5 125870970 125871045 -73759105 - MIR SINE MIR -171 91 12 187 388 62 0 chr5 125871072 125871152 -73758998 + MIR SINE MIR 10 94 -168 317 236 28 0 chr5 125871568 125871640 -73758510 + MLT1I LTR MaLR 82 155 -254 1655 93 4 30 chr5 125871646 125871883 -73758267 + AluSg/x SINE Alu 65 295 -14 788 211 0 39 chr5 125873468 125873624 -73756526 - FRAM SINE Alu -22 154 5 330 198 23 47 chr5 125874480 125874566 -73755584 + LTR33A LTR ERVL 434 517 -6 21 0 0 0 chr5 125874640 125874661 -73755489 + AT_rich Low_complexity Low_complexity 1 21 0 231 36 0 0 chr5 125874661 125874689 -73755461 + (GA)n Simple_repeat Simple_repeat 2 29 0 2368 71 0 3 chr5 125874689 125874984 -73755166 - AluSc SINE Alu -7 302 9 26 50 0 0 chr5 125875203 125875243 -73754907 + AT_rich Low_complexity Low_complexity 1 40 0 1922 169 0 0 chr5 125875308 125875615 -73754535 + AluSx SINE Alu 1 307 -5 1498 165 4 12 chr5 125875673 125875922 -73754228 + AluJo SINE Alu 50 296 -16 368 274 96 48 chr5 125875983 125876191 -73753959 - MER112 DNA MER1_type -14 246 29 224 287 153 40 chr5 125878104 125878254 -73751896 + MER5A DNA MER1_type 18 184 -5 3751 106 92 25 chr5 125878687 125879739 -73750411 + MER11A LTR ERVK 1 1232 -4 1485 182 87 88 chr5 125879862 125880589 -73749561 + LTR1B LTR ERV1 1 787 -39 212 347 120 13 chr5 125880685 125880835 -73749315 - L2 LINE L2 -805 2509 2344 1844 177 91 34 chr5 125880933 125881398 -73748752 - LTR10A LTR ERV1 -61 548 1 6133 237 19 29 chr5 125881400 125882901 -73747249 - LTR10A-int LTR ERV1 -3 6646 5162 8058 108 13 2 chr5 125882962 125884168 -73745982 - Harlequin LTR ERV1 -3631 4185 1843 721 148 9 0 chr5 125884393 125884508 -73745642 - 5S rRNA rRNA 0 121 6 227 269 75 62 chr5 125884639 125884799 -73745351 - L1MCa LINE L1 -5030 1396 1235 37663 83 30 10 chr5 125885037 125891055 -73739095 - L1PA6 LINE L1 -5 6149 11 393 202 167 0 chr5 125891117 125891201 -73738949 + LTR8 LTR ERV1 156 253 -438 5661 98 27 90 chr5 125891205 125892403 -73737747 - MER51B-int LTR ERV1 -5178 1718 704 292 189 133 56 chr5 125892411 125892501 -73737649 - MER51B-int LTR ERV1 -5578 1071 975 7476 105 9 19 chr5 125892882 125893949 -73736201 - MER11C LTR ERVK -14 1057 1 411 245 98 0 chr5 125894104 125894247 -73735903 - MER51B-int LTR ERV1 -7341 444 288 922 239 73 7 chr5 125894273 125894545 -73735605 - MER51B-int LTR ERV1 -6310 339 50 2437 109 23 68 chr5 125895382 125895777 -73734373 - MER51B LTR ERV1 0 377 1 2136 128 0 7 chr5 125895817 125896113 -73734037 + AluSg SINE Alu 1 294 -16 186 43 0 0 chr5 125896594 125896617 -73733533 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2015 105 7 11 chr5 125896619 125896896 -73733254 - AluSg SINE Alu -22 288 13 2962 75 162 192 chr5 125896913 125897785 -73732365 + LTR12 LTR ERV1 57 714 0 22002 105 17 8 chr5 125897798 125900872 -73729278 + HERV9 LTR ERV1 40 3139 -5260 6185 95 28 8 chr5 125900881 125901737 -73728413 + HERV9 LTR ERV1 4082 4954 -3445 2327 166 111 82 chr5 125901730 125902586 -73727564 + HERV9 LTR ERV1 840 1720 -5176 * 1725 78 17 4 chr5 125902581 125902812 -73727338 + HERV9 LTR ERV1 7757 7990 -409 * 406 179 119 12 chr5 125902813 125902897 -73727253 - L1PA13 LINE L1 -289 5874 5782 237 179 18 18 chr5 125903164 125903220 -73726930 + L1MD3 LINE L1 7926 7981 -14 24 0 0 0 chr5 125903221 125903245 -73726905 + AT_rich Low_complexity Low_complexity 1 24 0 1099 310 49 34 chr5 125903747 125904273 -73725877 + LTR67 LTR ERVL 16 549 -8 2265 242 13 29 chr5 125904601 125905126 -73725024 + LTR40a LTR ERVL 3 519 0 191 348 11 22 chr5 125905167 125905256 -73724894 - L2 LINE L2 -189 3083 2996 483 241 46 0 chr5 125905475 125905583 -73724567 + MLT1F1 LTR MaLR 67 179 -388 375 111 200 11 chr5 125905583 125905673 -73724477 + L1MC1 LINE L1 5722 5828 -505 367 328 44 0 chr5 125905687 125905870 -73724280 + L1M4 LINE L1 2716 2906 -3240 231 0 0 0 chr5 125905874 125905899 -73724251 + L1PA6 LINE L1 5853 5877 -278 4810 47 35 5 chr5 125905899 125906895 -73723255 + MER11A LTR ERVK 1 1266 0 2247 83 0 21 chr5 125906895 125907184 -73722966 + L1PA6 LINE L1 5872 6154 0 2846 128 28 53 chr5 125907390 125907897 -73722253 + L1MC1 LINE L1 5835 6328 -5 1009 252 95 41 chr5 125907927 125908296 -73721854 + MLT1F1 LTR MaLR 179 567 0 188 231 0 0 chr5 125908489 125908528 -73721622 - MIR SINE MIR -6 256 218 2225 87 0 40 chr5 125908941 125909262 -73720888 + AluY SINE Alu 1 308 -3 1104 292 34 13 chr5 125909453 125909922 -73720228 + L1M4 LINE L1 2461 2939 -3207 233 314 161 55 chr5 125909932 125910460 -73719690 - L2 LINE L2 -2201 1113 530 423 341 54 2 chr5 125911109 125911422 -73718728 + L2 LINE L2 2705 3085 -228 463 229 133 6 chr5 125911480 125911646 -73718504 + MIR SINE MIR 50 236 -26 480 236 160 0 chr5 125911665 125911809 -73718341 + L2 LINE L2 3115 3281 -32 2683 117 6 6 chr5 125911812 125912172 -73717978 + THE1B LTR MaLR 1 360 -4 11044 104 45 17 chr5 125912176 125913641 -73716509 + THE1B-int LTR MaLR 1 1424 -156 1816 169 0 0 chr5 125913641 125913925 -73716225 - AluSx SINE Alu -16 296 13 611 212 9 0 chr5 125913823 125913936 -73716214 - AluSq/x SINE Alu -198 114 1 11044 104 45 17 chr5 125913936 125913996 -73716154 + THE1B-int LTR MaLR 1435 1580 0 1781 122 11 8 chr5 125913996 125914259 -73715891 + THE1B LTR MaLR 1 264 -100 2096 98 17 10 chr5 125915384 125915679 -73714471 + AluY SINE Alu 1 297 -14 1960 102 4 8 chr5 125916133 125916399 -73713751 + L1PA8 LINE L1 5905 6169 -3 213 39 0 0 chr5 125916994 125917020 -73713130 + (TCCC)n Simple_repeat Simple_repeat 4 29 0 335 261 37 52 chr5 125918473 125918607 -73711543 - L2 LINE L2 -23 3290 3159 1642 125 49 66 chr5 125918661 125918981 -73711169 - AluJo SINE Alu 0 315 1 1069 285 44 44 chr5 125919026 125919570 -73710580 - L2 LINE L2 -711 2603 2060 252 350 21 10 chr5 125920630 125920727 -73709423 - MER5B DNA MER1_type -5 173 76 1709 159 19 19 chr5 125920851 125921159 -73708991 + AluJb SINE Alu 1 308 -4 1579 70 50 0 chr5 125921333 125921532 -73708618 + AluSc SINE Alu 89 297 -12 213 39 0 0 chr5 125922144 125922170 -73707980 + (TAA)n Simple_repeat Simple_repeat 3 28 0 671 231 169 10 chr5 125922191 125922386 -73707764 - MIR SINE MIR -26 236 11 478 232 40 7 chr5 125922533 125922684 -73707466 + MER103 DNA DNA 4 159 -7 409 193 193 18 chr5 125922860 125922974 -73707176 - MER94 DNA DNA 0 134 1 597 247 90 11 chr5 125923615 125923793 -73706357 + MIR SINE MIR 5 196 -66 2169 117 7 0 chr5 125923796 125924096 -73706054 + AluSx SINE Alu 1 302 -10 24 53 0 0 chr5 125925224 125925262 -73704888 + AT_rich Low_complexity Low_complexity 1 38 0 471 283 164 5 chr5 125925796 125926015 -73704135 - MIR SINE MIR -7 255 2 576 281 121 4 chr5 125926921 125927152 -73702998 + MLT1K LTR MaLR 16 273 -315 1692 157 0 49 chr5 125931023 125931328 -73698822 - AluJb SINE Alu -22 290 1 2373 90 3 0 chr5 125931672 125931973 -73698177 + AluSq SINE Alu 1 302 -11 1704 124 147 0 chr5 125932580 125932846 -73697304 - AluSx SINE Alu -7 305 1 2146 117 21 0 chr5 125934806 125935096 -73695054 - AluSx SINE Alu -11 301 6 331 226 226 9 chr5 125936215 125936330 -73693820 - MIR SINE MIR -65 197 58 2204 112 0 3 chr5 125936909 125937212 -73692938 + AluSq SINE Alu 5 306 -7 243 0 0 0 chr5 125937321 125937348 -73692802 + (CA)n Simple_repeat Simple_repeat 2 28 0 2225 120 3 0 chr5 125938594 125938893 -73691257 + AluSq SINE Alu 1 300 -13 22 0 0 0 chr5 125938906 125938928 -73691222 + AT_rich Low_complexity Low_complexity 1 22 0 812 281 171 6 chr5 125939923 125940279 -73689871 - MLT1H LTR MaLR -1 548 134 3536 159 27 15 chr5 125940286 125940877 -73689273 - MER77 LTR ERV1 -7 598 1 345 245 20 29 chr5 125940877 125940975 -73689175 - MLT1H LTR MaLR -445 97 1 196 333 28 0 chr5 125941161 125941233 -73688917 - L2 LINE L2 -8 3305 3232 1733 150 20 33 chr5 125941577 125941883 -73688267 + AluJb SINE Alu 3 304 -8 933 161 48 30 chr5 125941995 125942163 -73687987 - AluJb SINE Alu -13 299 129 478 208 96 0 chr5 125943543 125943703 -73686447 - L1MD2 LINE L1 -24 7971 6198 1335 281 96 17 chr5 125943708 125944284 -73685866 - L1MB4 LINE L1 -256 5924 5304 251 172 0 17 chr5 125944307 125944365 -73685785 + CT-rich Low_complexity Low_complexity 3 59 0 830 172 191 42 chr5 125944370 125944637 -73685513 - L1ME2 LINE L1 -19 6145 5838 2217 120 3 0 chr5 125944925 125945233 -73684917 - AluSq SINE Alu 0 313 5 315 243 110 15 chr5 125945824 125945960 -73684190 - MIR SINE MIR -93 169 21 360 263 188 38 chr5 125946264 125946424 -73683726 + MIR SINE MIR 69 252 -10 1089 294 58 55 chr5 125947520 125947567 -73682583 + MLT1K LTR MaLR 23 68 -520 2239 101 3 3 chr5 125947567 125947865 -73682285 + AluSx SINE Alu 5 302 -10 1089 294 58 55 chr5 125947865 125948347 -73681803 + MLT1K LTR MaLR 68 554 -34 2300 86 0 10 chr5 125948403 125948704 -73681446 - AluSc SINE Alu -11 298 1 389 204 160 7 chr5 125948958 125949111 -73681039 + MIR SINE MIR 64 249 -13 2448 91 0 0 chr5 125949376 125949685 -73680465 - AluSx SINE Alu -3 309 1 417 20 0 0 chr5 125952960 125953010 -73677140 + (TG)n Simple_repeat Simple_repeat 2 51 0 2275 125 0 0 chr5 125953575 125953887 -73676263 - AluSx SINE Alu 0 312 1 24 0 0 0 chr5 125955253 125955277 -73674873 + AT_rich Low_complexity Low_complexity 1 24 0 1363 163 46 59 chr5 125956276 125956388 -73673762 + AluJb SINE Alu 1 113 -199 2445 68 0 0 chr5 125956388 125956683 -73673467 + AluY SINE Alu 1 295 -16 1363 163 46 59 chr5 125956683 125956877 -73673273 + AluJb SINE Alu 113 303 -9 2227 110 0 3 chr5 125957217 125957525 -73672625 + AluSx SINE Alu 1 307 -5 735 237 40 96 chr5 125958223 125958676 -73671474 - MER113 DNA MER1_type? -3 518 90 1350 149 12 33 chr5 125958676 125958917 -73671233 - MER46A DNA MER2_type 0 236 1 735 237 40 96 chr5 125958917 125958932 -73671218 - MER113 DNA MER1_type? -431 90 76 321 241 8 68 chr5 125959335 125959468 -73670682 - Charlie8 DNA MER1_type -2247 170 46 687 142 0 71 chr5 125959468 125959609 -73670541 + L1MB7 LINE L1 6035 6165 -19 23 0 0 0 chr5 125960213 125960236 -73669914 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 125960266 125960291 -73669859 + AT_rich Low_complexity Low_complexity 1 25 0 2216 110 0 19 chr5 125960655 125960965 -73669185 - AluSx SINE Alu -7 305 2 559 244 70 66 chr5 125961397 125961666 -73668484 + L2 LINE L2 2995 3266 -1 1615 153 71 10 chr5 125961666 125961960 -73668190 + AluJo SINE Alu 1 312 0 763 291 61 0 chr5 125962438 125962699 -73667451 - MER102b DNA MER1_type -12 329 53 1768 161 38 7 chr5 125963335 125963627 -73666523 + AluJo SINE Alu 1 301 -11 216 306 89 48 chr5 125963941 125964065 -73666085 - L2 LINE L2 -191 3081 2953 204 111 0 0 chr5 125964119 125964155 -73665995 + (ATTTG)n Simple_repeat Simple_repeat 5 40 0 1682 181 4 7 chr5 125964155 125964436 -73665714 - AluSx SINE Alu -32 280 1 4754 158 41 47 chr5 126014588 126015486 -73614664 - L1P3 LINE L1 -4805 1656 764 1667 219 0 3 chr5 126015487 126015793 -73614357 - L1P3 LINE L1 -6147 314 10 391 202 167 0 chr5 126015856 126015940 -73614210 + LTR8 LTR ERV1 156 253 -438 1009 82 0 0 chr5 126015944 126016078 -73614072 - MER51B-int LTR ERV1 -5178 1718 1585 * 5718 95 19 62 chr5 126016053 126017219 -73612931 - MER51B-int LTR ERV1 -5481 1415 704 297 189 133 56 chr5 126017227 126017317 -73612833 - MER51B-int LTR ERV1 -5578 1071 975 7472 105 9 19 chr5 126017698 126018765 -73611385 - MER11C LTR ERVK -14 1057 1 1062 234 65 91 chr5 126018866 126019361 -73610789 - MER51B-int LTR ERV1 -6118 531 50 2308 122 18 63 chr5 126020198 126020593 -73609557 - MER51B LTR ERV1 0 377 1 2151 128 0 7 chr5 126020633 126020929 -73609221 + AluSg SINE Alu 1 294 -16 186 43 0 0 chr5 126021410 126021433 -73608717 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2022 99 4 8 chr5 126021435 126021698 -73608452 - AluSg SINE Alu -22 288 27 6071 61 8 94 chr5 126021698 126022601 -73607549 + LTR12 LTR ERV1 2 826 0 22106 105 17 8 chr5 126022614 126025686 -73604464 + HERV9 LTR ERV1 40 3139 -5260 6189 112 43 10 chr5 126025695 126026717 -73603433 + HERV9 LTR ERV1 840 5050 -3445 2155 99 17 7 chr5 126027176 126027470 -73602680 + AluY SINE Alu 1 297 -14 1861 100 0 4 chr5 126027924 126028196 -73601954 + L1PA8 LINE L1 5905 6172 0 470 227 124 49 chr5 126028307 126028340 -73601810 - L2 LINE L2 0 3313 3284 2626 110 6 6 chr5 126028340 126028704 -73601446 - THE1B LTR MaLR 0 364 1 10611 104 45 8 chr5 126028704 126028761 -73601389 - THE1B-int LTR MaLR 0 1580 1527 1952 166 0 0 chr5 126028761 126029057 -73601093 + AluSx SINE Alu 1 296 -16 10611 104 45 8 chr5 126029057 126030522 -73599628 - THE1B-int LTR MaLR -53 1527 1 2531 119 6 6 chr5 126030524 126030886 -73599264 - THE1B LTR MaLR -2 362 1 470 227 124 49 chr5 126030886 126031033 -73599117 - L2 LINE L2 -29 3284 3115 406 246 37 0 chr5 126031052 126031186 -73598964 - MIR SINE MIR -26 236 98 367 344 54 2 chr5 126031276 126031589 -73598561 - L2 LINE L2 -228 3085 2705 1063 292 34 13 chr5 126032776 126033245 -73596905 - L1M4 LINE L1 -3207 2939 2461 2506 91 0 0 chr5 126033436 126033744 -73596406 - AluY SINE Alu -3 308 1 1008 249 95 41 chr5 126034388 126034757 -73595393 - MLT1F1 LTR MaLR 0 567 179 2682 128 28 53 chr5 126034787 126035294 -73594856 - L1MC1 LINE L1 -5 6328 5835 2140 83 0 21 chr5 126035500 126035789 -73594361 - L1PA6 LINE L1 0 6154 5872 3992 80 35 41 chr5 126035789 126036840 -73593310 - MER11A LTR ERVK 0 1266 1 232 0 0 0 chr5 126036840 126036865 -73593285 - L1PA6 LINE L1 -277 5877 5853 370 111 200 11 chr5 126037066 126037156 -73592994 - L1MC1 LINE L1 -505 5828 5722 638 254 39 2 chr5 126037156 126037327 -73592823 - MLT1E LTR MaLR -388 179 4 584 281 121 4 chr5 126039744 126039975 -73590175 - MLT1K LTR MaLR -315 273 16 412 307 106 5 chr5 126040911 126041100 -73589050 + MIR SINE MIR 48 255 -7 342 208 160 7 chr5 126041493 126041646 -73588504 - MIR SINE MIR -13 249 64 2355 87 0 7 chr5 126041900 126042200 -73587950 + AluSc SINE Alu 1 298 -11 864 314 69 45 chr5 126042459 126042831 -73587319 - MLT1K LTR MaLR -136 452 67 2261 101 3 3 chr5 126042831 126043129 -73587021 - AluSx SINE Alu -10 302 5 864 314 69 45 chr5 126043129 126043176 -73586974 - MLT1K LTR MaLR -521 67 23 316 263 188 38 chr5 126044272 126044432 -73585718 - MIR SINE MIR -10 252 69 274 250 83 20 chr5 126044732 126044872 -73585278 + MIR SINE MIR 26 169 -42 2228 120 3 0 chr5 126045464 126045772 -73584378 + AluSq SINE Alu 5 313 0 815 171 191 42 chr5 126046061 126046328 -73583822 + L1ME3 LINE L1 5838 6145 -19 251 172 0 17 chr5 126046333 126046391 -73583759 + GA-rich Low_complexity Low_complexity 3 59 0 2807 182 81 5 chr5 126046414 126046995 -73583155 + L1MD2 LINE L1 5304 5930 -256 473 208 96 0 chr5 126046995 126047155 -73582995 + L1MD2 LINE L1 6198 7971 -24 943 161 48 30 chr5 126048535 126048703 -73581447 + AluJb SINE Alu 129 299 -13 1748 150 20 33 chr5 126048815 126049121 -73581029 - AluJb SINE Alu -8 304 3 349 245 20 29 chr5 126049723 126049821 -73580329 + MLT1H LTR MaLR 1 97 -445 3464 160 31 15 chr5 126049821 126050410 -73579740 + MER77 LTR ERV1 1 598 -7 811 281 171 6 chr5 126050417 126050773 -73579377 + MLT1H LTR MaLR 134 548 -1 22 0 0 0 chr5 126051746 126051768 -73578382 + AT_rich Low_complexity Low_complexity 1 22 0 2245 120 3 0 chr5 126051781 126052080 -73578070 - AluSq SINE Alu -13 300 1 243 0 0 0 chr5 126053325 126053352 -73576798 + (TG)n Simple_repeat Simple_repeat 2 28 0 2221 112 0 3 chr5 126053461 126053764 -73576386 - AluSq SINE Alu -7 306 5 295 226 226 9 chr5 126054343 126054458 -73575692 + MIR SINE MIR 58 197 -65 2156 117 21 0 chr5 126055577 126055867 -73574283 + AluSx SINE Alu 6 301 -11 1725 124 147 0 chr5 126057827 126058093 -73572057 + AluSx SINE Alu 1 305 -7 2394 90 3 0 chr5 126058700 126059001 -73571149 - AluSq SINE Alu -11 302 1 1709 157 0 49 chr5 126059345 126059650 -73570500 + AluJb SINE Alu 1 290 -22 912 296 44 42 chr5 126060946 126061489 -73568661 + L2 LINE L2 2060 2603 -711 1667 125 49 66 chr5 126061534 126061854 -73568296 + AluJo SINE Alu 1 315 0 298 261 37 52 chr5 126061908 126062042 -73568108 + L2 LINE L2 3159 3290 -23 289 143 16 16 chr5 126063455 126063518 -73566632 + GA-rich Low_complexity Low_complexity 3 65 0 243 0 0 0 chr5 126063934 126063961 -73566189 + (CAAAA)n Simple_repeat Simple_repeat 1 27 0 685 203 65 28 chr5 126063977 126064305 -73565845 + LTR37A LTR ERV1 25 426 0 213 294 59 0 chr5 126064501 126064569 -73565581 + MIR SINE MIR 119 190 -72 21 36 0 0 chr5 126064818 126064846 -73565304 + AT_rich Low_complexity Low_complexity 1 28 0 2186 117 7 0 chr5 126065974 126066274 -73563876 - AluSx SINE Alu -10 302 1 624 249 90 6 chr5 126066277 126066454 -73563696 - MIR SINE MIR -66 196 5 409 193 193 18 chr5 126067094 126067208 -73562942 + MER94 DNA DNA 1 134 0 503 237 33 7 chr5 126067384 126067536 -73562614 - MER103 DNA DNA -7 159 4 671 231 169 10 chr5 126067683 126067878 -73562272 + MIR SINE MIR 11 236 -26 213 39 0 0 chr5 126067899 126067925 -73562225 + (TTA)n Simple_repeat Simple_repeat 3 28 0 1579 70 50 0 chr5 126068537 126068736 -73561414 - AluSc SINE Alu -12 297 89 1709 159 19 19 chr5 126068910 126069218 -73560932 - AluJb SINE Alu -4 308 1 252 350 21 10 chr5 126069342 126069439 -73560711 + MER5B DNA MER1_type 76 173 -5 269 264 83 0 chr5 126070330 126070402 -73559748 - MIR SINE MIR -72 136 59 1682 181 4 7 chr5 126070643 126070924 -73559226 + AluSx SINE Alu 1 280 -32 204 111 0 0 chr5 126070924 126070960 -73559190 + (CAAAT)n Simple_repeat Simple_repeat 5 40 0 216 306 89 48 chr5 126071014 126071138 -73559012 + L2 LINE L2 2953 3081 -191 1768 161 38 7 chr5 126071452 126071744 -73558406 - AluJo SINE Alu -11 301 1 779 287 61 0 chr5 126072380 126072641 -73557509 + MER102a DNA MER1_type 42 318 -12 1615 153 71 10 chr5 126073120 126073414 -73556736 - AluJo SINE Alu 0 312 1 559 246 71 66 chr5 126073414 126073683 -73556467 - L2 LINE L2 -7 3265 2995 2216 110 0 19 chr5 126074116 126074426 -73555724 + AluSx SINE Alu 2 305 -7 25 0 0 0 chr5 126074789 126074814 -73555336 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 126074844 126074867 -73555283 + AT_rich Low_complexity Low_complexity 1 23 0 687 142 0 71 chr5 126075471 126075612 -73554538 - L1MB7 LINE L1 -19 6165 6035 321 241 8 68 chr5 126075612 126075745 -73554405 + Charlie8 DNA MER1_type 46 170 -2247 735 237 40 96 chr5 126076139 126076154 -73553996 + MER113 DNA MER1_type? 76 90 -431 1389 156 4 37 chr5 126076154 126076398 -73553752 + MER46A DNA MER2_type 1 236 0 735 237 40 96 chr5 126076398 126076851 -73553299 + MER113 DNA MER1_type? 90 518 -3 2227 110 0 3 chr5 126077549 126077857 -73552293 - AluSx SINE Alu -5 307 1 1468 154 46 56 chr5 126078192 126078384 -73551766 - AluJb SINE Alu -10 302 113 2445 68 0 0 chr5 126078384 126078679 -73551471 - AluY SINE Alu -16 295 1 1468 154 46 56 chr5 126078679 126078791 -73551359 - AluJb SINE Alu -199 113 1 24 0 0 0 chr5 126079791 126079815 -73550335 + AT_rich Low_complexity Low_complexity 1 24 0 2275 125 0 0 chr5 126081181 126081493 -73548657 + AluSx SINE Alu 1 312 0 360 43 0 0 chr5 126082058 126082104 -73548046 + (CA)n Simple_repeat Simple_repeat 2 47 0 2483 87 0 0 chr5 126085383 126085693 -73544457 + AluSx SINE Alu 1 310 -2 471 209 11 22 chr5 126085793 126085884 -73544266 + MER21B LTR ERV1 1 90 -773 1513 160 88 4 chr5 126085889 126086152 -73543998 + AluJo SINE Alu 3 287 -25 1498 227 70 60 chr5 126086183 126086894 -73543256 + MER21B LTR ERV1 19 809 -54 333 335 18 18 chr5 126087372 126087536 -73542614 + L2 LINE L2 2015 2178 -1136 1705 176 26 13 chr5 126087719 126088021 -73542129 - AluJo SINE Alu -6 306 1 352 344 41 0 chr5 126088024 126088146 -73542004 - MIR SINE MIR -66 142 16 358 265 20 10 chr5 126089900 126089998 -73540152 + MIR3 SINE MIR 106 204 -4 342 301 177 63 chr5 126091008 126091387 -73538763 - L2 LINE L2 0 3272 2851 197 323 86 15 chr5 126091373 126091571 -73538579 - L2 LINE L2 -1756 1558 1347 * 575 272 38 28 chr5 126095712 126095928 -73534222 + MIR SINE MIR 2 216 -46 2268 123 0 0 chr5 126098447 126098757 -73531393 + AluSg SINE Alu 1 310 0 1816 130 58 10 chr5 126098893 126099186 -73530964 - MER47A DNA MER2_type 0 366 60 1591 179 7 18 chr5 126099208 126099487 -73530663 + AluJo SINE Alu 1 276 -36 379 121 11 11 chr5 126099499 126099590 -73530560 + (CA)n Simple_repeat Simple_repeat 2 92 0 1192 214 75 22 chr5 126100066 126100388 -73529762 + MER2 DNA MER2_type 1 339 -6 280 262 28 47 chr5 126100469 126100611 -73529539 - MIR SINE MIR -63 145 20 424 254 31 31 chr5 126101089 126101219 -73528931 + MIR SINE MIR 92 221 -41 293 312 52 100 chr5 126101574 126101628 -73528522 - L3 LINE CR1 -3 1574 1519 2323 110 3 0 chr5 126101628 126101936 -73528214 - AluSq SINE Alu -4 309 1 293 312 52 100 chr5 126101936 126102112 -73528038 - L3 LINE CR1 -58 1519 1355 1299 277 23 3 chr5 126103685 126103995 -73526155 + MER119 DNA MER1_type 1 316 -267 1130 221 81 105 chr5 126103997 126104638 -73525512 + LTR41 LTR ERVL 11 698 -75 3390 136 60 24 chr5 126104638 126105234 -73524916 - L1MB3 LINE L1 -1 6182 5565 1130 221 81 105 chr5 126105234 126105308 -73524842 + LTR41 LTR ERVL 698 772 -1 1042 189 87 28 chr5 126105308 126105560 -73524590 + MER119 DNA MER1_type 317 583 0 21 36 0 0 chr5 126105677 126105705 -73524445 + AT_rich Low_complexity Low_complexity 1 28 0 2528 151 65 0 chr5 126106057 126106454 -73523696 + MSTB LTR MaLR 4 426 0 323 214 0 159 chr5 126109144 126109270 -73520880 + MER102b DNA MER1_type 232 337 -4 21 0 0 0 chr5 126109426 126109447 -73520703 + AT_rich Low_complexity Low_complexity 1 21 0 214 276 35 112 chr5 126109902 126110018 -73520132 - MIR3 SINE MIR 0 208 102 207 0 0 0 chr5 126111054 126111077 -73519073 + (A)n Simple_repeat Simple_repeat 1 23 0 337 218 79 143 chr5 126111153 126111405 -73518745 + MLT1L LTR MaLR 137 372 -243 1193 158 5 45 chr5 126111472 126111694 -73518456 - AluJo SINE Alu -15 297 85 450 0 0 0 chr5 126112323 126112373 -73517777 + (TG)n Simple_repeat Simple_repeat 2 51 0 22 0 0 0 chr5 126112924 126112946 -73517204 + AT_rich Low_complexity Low_complexity 1 22 0 308 284 121 0 chr5 126114199 126114340 -73515810 + MIR3 SINE MIR 3 160 -48 * 1074 235 117 55 chr5 126114339 126114882 -73515268 + L2 LINE L2 2743 3309 -4 919 92 0 8 chr5 126115757 126115877 -73514273 - AluSc SINE Alu -22 287 169 306 0 0 0 chr5 126115878 126115912 -73514238 + (CA)n Simple_repeat Simple_repeat 2 35 0 210 170 64 0 chr5 126117675 126117722 -73512428 + (CATA)n Simple_repeat Simple_repeat 1 50 0 411 318 91 14 chr5 126118093 126118313 -73511837 + MIR SINE MIR 26 262 0 212 301 48 0 chr5 126120804 126120887 -73509263 - MIR SINE MIR -72 190 104 230 306 69 49 chr5 126121305 126121449 -73508701 - MIR3 SINE MIR -3 205 59 409 100 0 0 chr5 126122225 126122275 -73507875 + Alu SINE Alu 2 51 -258 622 243 47 7 chr5 126122622 126122770 -73507380 + MIR SINE MIR 34 187 -75 2395 89 0 0 chr5 126122778 126123082 -73507068 + AluSx SINE Alu 1 304 -8 181 274 59 49 chr5 126124075 126124177 -73505973 + L2 LINE L2 2924 3026 -246 292 286 126 80 chr5 126124361 126124782 -73505368 - L2 LINE L2 -1 3312 2840 2334 63 0 3 chr5 126124782 126125106 -73505044 + AluY SINE Alu 1 323 0 292 286 126 80 chr5 126125106 126125172 -73504978 - L2 LINE L2 -473 2840 2778 532 255 110 28 chr5 126125180 126125435 -73504715 + L1ME LINE L1 5536 5811 -310 907 161 0 0 chr5 126125435 126125578 -73504572 - FLAM_C SINE Alu 0 143 1 1522 117 0 0 chr5 126126226 126126440 -73503710 - AluSg/x SINE Alu 0 312 99 252 186 143 14 chr5 126127045 126127115 -73503035 - L2 LINE L2 -5 3267 3189 884 323 153 20 chr5 126127207 126127904 -73502246 - L2 LINE L2 -493 2821 2032 670 243 129 139 chr5 126128201 126129306 -73500844 - L2 LINE L2 -1 3312 2234 2205 90 0 3 chr5 126129306 126129596 -73500554 - AluY SINE Alu -22 289 1 670 243 129 139 chr5 126129596 126130255 -73499895 - L2 LINE L2 -1079 2234 1570 552 271 110 47 chr5 126130350 126130715 -73499435 - L3 LINE CR1 -3 1574 1187 884 253 0 0 chr5 126131232 126131406 -73498744 - FRAM SINE Alu -5 171 1 190 172 0 35 chr5 126131798 126131856 -73498294 + GA-rich Low_complexity Low_complexity 2 57 0 1636 168 3 46 chr5 126131936 126132240 -73497910 + AluJb SINE Alu 1 291 -21 23 0 0 0 chr5 126132439 126132462 -73497688 + AT_rich Low_complexity Low_complexity 1 23 0 2052 106 11 3 chr5 126132635 126132918 -73497232 + AluSx SINE Alu 1 285 -27 31 0 0 0 chr5 126132918 126132949 -73497201 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 126133219 126133241 -73496909 + AT_rich Low_complexity Low_complexity 1 22 0 997 195 54 19 chr5 126133546 126133751 -73496399 - MER20 DNA MER1_type -4 215 4 944 167 65 6 chr5 126133761 126133929 -73496221 - MER5B DNA MER1_type 0 178 1 1983 151 7 3 chr5 126134073 126134372 -73495778 + AluJo SINE Alu 1 300 -12 1957 131 0 7 chr5 126135148 126135464 -73494686 + AluY SINE Alu 1 314 0 1014 128 0 0 chr5 126135476 126135617 -73494533 + AluSg/x SINE Alu 127 267 -45 520 313 91 12 chr5 126135635 126135878 -73494272 - MIR SINE MIR 0 262 1 361 264 11 0 chr5 126136222 126136313 -73493837 - L2 LINE L2 0 3313 3222 642 186 0 53 chr5 126136321 126136474 -73493676 - FLAM_A SINE Alu 0 158 12 230 286 48 36 chr5 126136569 126136653 -73493497 + L2 LINE L2 3229 3313 0 812 134 0 40 chr5 126137744 126137893 -73492257 - FLAM_C SINE Alu 0 143 1 372 223 218 20 chr5 126138101 126138298 -73491852 - MIR SINE MIR -23 239 4 302 270 95 80 chr5 126138405 126138605 -73491545 - L1MC4a LINE L1 -1873 5935 5733 2367 84 10 3 chr5 126138790 126139088 -73491062 - AluSc SINE Alu -9 300 1 1801 179 0 3 chr5 126139174 126139487 -73490663 + AluJo SINE Alu 1 312 0 252 0 0 0 chr5 126139646 126139674 -73490476 + (ATTG)n Simple_repeat Simple_repeat 1 28 0 1943 123 30 0 chr5 126139676 126139945 -73490205 - AluSx SINE Alu -35 277 1 309 326 84 33 chr5 126140455 126140670 -73489480 - MIR SINE MIR -12 250 25 1989 124 31 0 chr5 126141623 126141914 -73488236 - AluSg SINE Alu -10 300 1 24 32 0 0 chr5 126142329 126142360 -73487790 + AT_rich Low_complexity Low_complexity 1 31 0 186 167 0 111 chr5 126142411 126142465 -73487685 + MIR3 SINE MIR 123 170 -38 305 239 123 49 chr5 126142753 126142916 -73487234 - MER104 DNA Tc2 -4 176 2 491 281 77 10 chr5 126143083 126143279 -73486871 + L1MC/D LINE L1 5592 5800 -2008 387 217 48 0 chr5 126143419 126143502 -73486648 + HsTC2 DNA Tc2 1 87 -1811 21 71 0 0 chr5 126143814 126143856 -73486294 + AT_rich Low_complexity Low_complexity 1 42 0 2037 142 29 0 chr5 126143866 126144177 -73485973 + 7SLRNA srpRNA srpRNA 1 320 0 238 196 0 22 chr5 126144177 126144260 -73485890 + GA-rich Low_complexity Low_complexity 9 91 0 1024 159 19 0 chr5 126144881 126145038 -73485112 - FAM SINE Alu -14 161 2 943 147 0 0 chr5 126146220 126146363 -73483787 + FRAM SINE Alu 19 161 -15 216 353 59 0 chr5 126146404 126146489 -73483661 - L2 LINE L2 -571 2743 2654 195 295 16 33 chr5 126147138 126147199 -73482951 - MIR SINE MIR -130 78 19 224 348 127 35 chr5 126148841 126149266 -73480884 - L2 LINE L2 -5 3267 2804 379 276 178 23 chr5 126149721 126149935 -73480215 + MIR SINE MIR 16 262 0 44050 36 7 16 chr5 126150220 126156429 -73473721 + L1PA3 LINE L1 1 6155 0 335 252 82 15 chr5 126156612 126156747 -73473403 - L1MC5 LINE L1 -36 7925 7782 493 149 154 27 chr5 126156768 126156885 -73473265 - L1MB8 LINE L1 -7 6171 6040 2924 148 33 15 chr5 126156885 126157406 -73472744 + L1MA8 LINE L1 5761 6290 -1 493 149 154 27 chr5 126157406 126157418 -73472732 - L1MB8 LINE L1 -138 6040 6031 449 125 57 23 chr5 126157421 126157509 -73472641 + L1MA9 LINE L1 5818 5908 -404 1727 222 63 5 chr5 126157530 126157787 -73472363 - L1MB7 LINE L1 -126 6058 5767 369 0 0 0 chr5 126157787 126157828 -73472322 + (TA)n Simple_repeat Simple_repeat 2 42 0 1727 222 63 5 chr5 126157828 126157984 -73472166 - L1MB7 LINE L1 -417 5767 5621 238 301 32 21 chr5 126158039 126158132 -73472018 - MIR SINE MIR -121 141 48 291 269 41 55 chr5 126158165 126158310 -73471840 - HAL1 LINE L1 -580 1927 1785 329 280 37 89 chr5 126158313 126158527 -73471623 - HAL1 LINE L1 -2149 358 156 23 0 0 0 chr5 126158956 126158979 -73471171 + AT_rich Low_complexity Low_complexity 1 23 0 204 236 55 87 chr5 126159190 126159317 -73470833 - L2 LINE L2 -45 3268 3146 371 216 196 69 chr5 126159439 126159684 -73470466 + L2 LINE L2 2701 2976 -338 2149 243 38 19 chr5 126159789 126160315 -73469835 + MLT1F LTR MaLR 7 542 0 2033 130 72 23 chr5 126162820 126163167 -73466983 + L1MA9 LINE L1 5949 6312 0 180 0 0 0 chr5 126163173 126163193 -73466957 + (A)n Simple_repeat Simple_repeat 1 20 0 186 267 131 63 chr5 126163317 126163538 -73466612 - L2 LINE L2 -189 3083 2848 196 213 43 0 chr5 126163699 126163746 -73466404 + L2 LINE L2 3192 3240 -32 2248 85 0 3 chr5 126163835 126164129 -73466021 - AluY SINE Alu -13 298 6 465 247 89 42 chr5 126164556 126164746 -73465404 - L1MC4a LINE L1 -1914 5894 5696 189 255 71 51 chr5 126165164 126165262 -73464888 - MIR3 SINE MIR -1 207 108 2029 126 0 0 chr5 126165778 126166056 -73464094 - AluSx SINE Alu -15 297 20 501 231 64 26 chr5 126166293 126166449 -73463701 + MIR SINE MIR 86 247 -15 180 0 0 0 chr5 126166588 126166608 -73463542 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 786 146 8 31 chr5 126166992 126167122 -73463028 - FLAM_A SINE Alu -6 127 1 236 272 0 0 chr5 126168489 126168578 -73461572 + L1M4c LINE L1 1556 1700 -4682 2301 231 40 76 chr5 126168997 126169166 -73460984 + L1MC5 LINE L1 6478 6651 -1310 267 31 0 0 chr5 126169166 126169198 -73460952 + (TG)n Simple_repeat Simple_repeat 2 33 0 2301 231 40 76 chr5 126169198 126170125 -73460025 + L1MC5 LINE L1 6651 7520 -441 312 274 22 30 chr5 126170300 126170435 -73459715 + L1ME3A LINE L1 6037 6170 0 978 203 0 0 chr5 126170728 126170886 -73459264 + FAM SINE Alu 1 158 -17 28 29 0 0 chr5 126170895 126170930 -73459220 + AT_rich Low_complexity Low_complexity 1 35 0 575 306 88 33 chr5 126171205 126171440 -73458710 + MIR SINE MIR 25 262 0 405 0 0 0 chr5 126172052 126172097 -73458053 + (CA)n Simple_repeat Simple_repeat 1 45 0 219 69 0 0 chr5 126172097 126172126 -73458024 + (TC)n Simple_repeat Simple_repeat 2 30 0 851 185 15 41 chr5 126172397 126172423 -73457727 + MLT1B LTR MaLR 1 26 -364 1575 158 43 72 chr5 126172423 126172797 -73457353 + MLT1A1 LTR MaLR 1 363 -2 851 185 15 41 chr5 126172797 126172965 -73457185 + MLT1B LTR MaLR 26 190 -200 235 262 48 62 chr5 126172976 126173121 -73457029 + L1M4c LINE L1 1825 1967 -4596 1597 173 17 40 chr5 126173253 126173599 -73456551 + MER44D DNA MER2_type 1 608 -1 1619 191 65 14 chr5 126173620 126173991 -73456159 + MLT1B LTR MaLR 1 390 0 2353 105 0 0 chr5 126174046 126174350 -73455800 + AluSx SINE Alu 1 304 -8 28 0 0 0 chr5 126175434 126175462 -73454688 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr5 126176411 126176431 -73453719 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 444 203 81 32 chr5 126177239 126177362 -73452788 - MIR SINE MIR -75 187 59 184 219 109 0 chr5 126178099 126178163 -73451987 + MIR SINE MIR 180 250 -12 * 287 180 0 0 chr5 126178131 126178181 -73451969 + L2 LINE L2 3223 3272 0 811 106 0 0 chr5 126179920 126180024 -73450126 + FLAM_A SINE Alu 18 121 -21 258 32 0 0 chr5 126180998 126181029 -73449121 + (CA)n Simple_repeat Simple_repeat 2 32 0 288 263 42 0 chr5 126181735 126181853 -73448297 + (CGGGG)n Simple_repeat Simple_repeat 1 123 0 256 270 151 16 chr5 126182008 126182134 -73448016 + MIR SINE MIR 113 255 -7 381 304 30 30 chr5 126182629 126182764 -73447386 - MIR SINE MIR -74 188 54 222 250 38 50 chr5 126182888 126182968 -73447182 - L2 LINE L2 -202 3070 2992 230 333 69 48 chr5 126183017 126183206 -73446944 - L2 LINE L2 -436 2878 2686 1420 190 139 144 chr5 126183275 126183900 -73446250 + MLT1E2 LTR MaLR 5 626 0 181 344 69 23 chr5 126184241 126184372 -73445778 + MIR SINE MIR 50 186 -76 26 30 0 0 chr5 126185162 126185195 -73444955 + AT_rich Low_complexity Low_complexity 1 33 0 1304 186 76 92 chr5 126185367 126185825 -73444325 - LTR45B LTR ERV1 -12 477 27 199 302 78 43 chr5 126186388 126186504 -73443646 - L2 LINE L2 -177 3095 2976 2309 55 14 7 chr5 126187743 126188033 -73442117 + AluY SINE Alu 1 292 -19 2021 118 21 0 chr5 126188750 126189038 -73441112 + AluSx SINE Alu 1 294 -18 1562 252 53 40 chr5 126189203 126189735 -73440415 + MLT1H1 LTR MaLR 1 539 -16 1563 160 41 55 chr5 126189847 126190210 -73439940 - MLT1B LTR MaLR -32 358 1 23 33 0 0 chr5 126190284 126190314 -73439836 + AT_rich Low_complexity Low_complexity 1 30 0 437 133 10 0 chr5 126190325 126190423 -73439727 + (TA)n Simple_repeat Simple_repeat 2 100 0 846 80 0 0 chr5 126190435 126190547 -73439603 - AluSg/x SINE Alu -2 308 197 255 269 54 47 chr5 126190562 126190711 -73439439 - L1MEc LINE L1 -4534 1862 1713 1828 123 4 0 chr5 126190761 126191013 -73439137 + AluSg SINE Alu 1 253 -57 5443 110 4 2 chr5 126191019 126192283 -73437867 - L1PA14 LINE L1 -4 6157 4888 1079 153 0 5 chr5 126192289 126192485 -73437665 - L1PA14 LINE L1 -1378 4768 4574 * 1115 269 81 40 chr5 126192480 126192832 -73437318 - L1MEc LINE L1 -4668 1728 1392 1857 136 3 37 chr5 126192832 126193126 -73437024 + AluJb SINE Alu 1 284 -28 1115 269 81 40 chr5 126193126 126193591 -73436559 - L1MEc LINE L1 -5004 1392 878 3612 138 69 4 chr5 126193636 126195271 -73434879 - L1PBa LINE L1 -4969 2199 315 216 0 0 0 chr5 126195272 126195296 -73434854 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1228 199 22 67 chr5 126195298 126195537 -73434613 - L1PBa LINE L1 -6852 316 93 1684 152 31 31 chr5 126195537 126195826 -73434324 - AluJo SINE Alu -21 291 3 1228 199 22 67 chr5 126195826 126195898 -73434252 - L1PBa LINE L1 -7075 93 19 2446 71 0 6 chr5 126195899 126196210 -73433940 - AluY SINE Alu -2 309 1 318 196 33 0 chr5 126196217 126196309 -73433841 - L1MEc LINE L1 -5512 884 790 * 485 216 72 0 chr5 126196307 126196418 -73433732 - MLT1B-int LTR MaLR -315 1056 938 1726 156 14 35 chr5 126196751 126197040 -73433110 - AluJb SINE Alu -19 293 11 1529 184 47 4 chr5 126197053 126197330 -73432820 - AluJb SINE Alu -23 289 1 2872 115 111 4 chr5 126198953 126199431 -73430719 - MER1A DNA MER1_type 0 529 1 291 237 106 56 chr5 126199833 126199935 -73430215 - L1ME LINE L1 -295 5826 5731 2128 137 3 13 chr5 126199935 126200250 -73429900 - AluSx SINE Alu 0 312 1 291 237 106 56 chr5 126200250 126200329 -73429821 - L1ME LINE L1 -390 5731 5635 332 259 107 65 chr5 126200383 126200599 -73429551 - L1ME LINE L1 -2270 5538 5314 22 0 0 0 chr5 126202106 126202128 -73428022 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr5 126202286 126202323 -73427827 + AT_rich Low_complexity Low_complexity 1 37 0 246 128 0 0 chr5 126202632 126202671 -73427479 + (CA)n Simple_repeat Simple_repeat 2 40 0 2184 128 3 0 chr5 126203529 126203841 -73426309 + AluSp SINE Alu 1 313 0 2182 89 7 17 chr5 126204620 126204922 -73425228 + AluSc SINE Alu 1 299 -10 237 372 41 21 chr5 126205258 126205403 -73424747 + MER5A DNA MER1_type 36 183 -6 723 250 59 19 chr5 126206123 126206379 -73423771 + L1MEc LINE L1 10 275 -6121 1270 232 159 10 chr5 126206397 126206880 -73423270 + L1MEc LINE L1 585 1139 -5257 612 281 125 5 chr5 126206973 126207197 -73422953 + MIR SINE MIR 3 253 -9 868 199 29 15 chr5 126207246 126207452 -73422698 - L1ME3 LINE L1 -8 6154 5946 2360 216 50 16 chr5 126207454 126208161 -73421989 - L1ME3 LINE L1 -1103 5043 4313 3910 131 44 7 chr5 126208161 126208884 -73421266 + Tigger2 DNA MER2_type 1 750 -1968 2338 63 10 13 chr5 126208890 126209192 -73420958 - AluY SINE Alu -10 301 1 817 163 182 5 chr5 126209269 126209472 -73420678 + Tigger2 DNA MER2_type 2470 2708 -10 914 189 66 0 chr5 126209472 126209684 -73420466 - L1ME3 LINE L1 -1832 4314 4089 21 57 0 0 chr5 126210166 126210201 -73419949 + AT_rich Low_complexity Low_complexity 1 35 0 1549 160 4 23 chr5 126210201 126210457 -73419693 - AluJo SINE Alu -61 251 1 2379 91 0 10 chr5 126210461 126210769 -73419381 - AluSq SINE Alu -8 305 1 366 217 28 107 chr5 126211580 126211767 -73418383 - L1MC4a LINE L1 -18 8013 7730 27 29 0 0 chr5 126213127 126213161 -73416989 + AT_rich Low_complexity Low_complexity 1 34 0 27 29 0 0 chr5 126215899 126215933 -73414217 + AT_rich Low_complexity Low_complexity 1 34 0 360 342 142 7 chr5 126216528 126217072 -73413078 - L1ME4a LINE L1 -105 6016 5391 339 288 65 28 chr5 126217214 126217429 -73412721 - HAL1 LINE L1 -753 1754 1532 389 268 108 66 chr5 126217474 126217687 -73412463 - HAL1 LINE L1 -1031 1476 1255 313 198 54 36 chr5 126217824 126217935 -73412215 - HAL1 LINE L1 -1423 1084 972 233 336 7 81 chr5 126218328 126218477 -73411673 - L2 LINE L2 -552 2762 2625 307 163 291 12 chr5 126218929 126219015 -73411135 + MER66B LTR ERV1 287 396 -90 691 192 78 6 chr5 126219087 126219254 -73410896 - MER58A DNA MER1_type -4 220 42 275 250 131 0 chr5 126219351 126219435 -73410715 - MER5A DNA MER1_type -86 103 9 29 0 0 0 chr5 126220148 126220177 -73409973 + AT_rich Low_complexity Low_complexity 1 29 0 694 192 8 8 chr5 126220381 126220511 -73409639 - FLAM_A SINE Alu -3 130 1 555 297 55 0 chr5 126220548 126220730 -73409420 + MIR SINE MIR 54 245 -17 933 203 6 23 chr5 126221059 126221236 -73408914 + FAM SINE Alu 1 174 -1 1617 204 14 39 chr5 126221238 126221600 -73408550 + MER93b LTR ERV1 10 362 -11 1309 206 124 32 chr5 126222100 126222295 -73407855 + MER31-int LTR ERV1 876 1052 -3884 2016 101 11 0 chr5 126222295 126222597 -73407553 - AluSg SINE Alu 0 305 1 1309 206 124 32 chr5 126222597 126223004 -73407146 + MER31-int LTR ERV1 1052 1454 -3482 1397 230 113 71 chr5 126223025 126223945 -73406205 + MER31-int LTR ERV1 1627 2585 -2351 746 137 0 43 chr5 126224020 126224159 -73405991 - FLAM_C SINE Alu 0 133 1 21 82 0 0 chr5 126224232 126224281 -73405869 + AT_rich Low_complexity Low_complexity 1 49 0 5666 183 56 68 chr5 126224298 126225868 -73404282 + MER31-int LTR ERV1 2603 4271 -818 1573 258 78 33 chr5 126225989 126226670 -73403480 + MER21B LTR ERV1 1 805 -58 29 0 0 0 chr5 126227257 126227286 -73402864 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 126227720 126227741 -73402409 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 126228830 126228851 -73401299 + AT_rich Low_complexity Low_complexity 1 21 0 559 313 121 32 chr5 126229702 126229831 -73400319 - L2 LINE L2 -12 3301 3185 2169 120 0 0 chr5 126229831 126230130 -73400020 + AluSx SINE Alu 1 299 -13 559 313 121 32 chr5 126230130 126230585 -73399565 - L2 LINE L2 -128 3185 2657 214 339 59 25 chr5 126230857 126230975 -73399175 + MIR SINE MIR 22 143 -65 21 71 0 0 chr5 126231370 126231412 -73398738 + AT_rich Low_complexity Low_complexity 1 42 0 1135 234 15 65 chr5 126231485 126231823 -73398327 - MER58B DNA MER1_type 0 341 21 25 0 0 0 chr5 126233105 126233130 -73397020 + AT_rich Low_complexity Low_complexity 1 25 0 1532 178 29 7 chr5 126233320 126233631 -73396519 + AluJb SINE Alu 1 317 0 1308 235 70 36 chr5 126233779 126234166 -73395984 + LTR40b LTR ERVL 1 400 -62 306 172 17 0 chr5 126234247 126234305 -73395845 + LTR40b LTR ERVL 404 462 0 2263 60 0 18 chr5 126234429 126234769 -73395381 + AluSc SINE Alu 1 335 0 844 136 0 0 chr5 126234968 126235093 -73395057 - AluJb SINE Alu -187 125 1 22 35 0 0 chr5 126236042 126236071 -73394079 + AT_rich Low_complexity Low_complexity 1 29 0 481 207 314 0 chr5 126236653 126236793 -73393357 - MER58C DNA MER1_type -23 192 9 193 277 64 0 chr5 126236798 126236845 -73393305 - MIR SINE MIR -68 140 91 2031 116 16 13 chr5 126237066 126237376 -73392774 - AluSq SINE Alu -2 311 1 1523 133 48 121 chr5 126237559 126237889 -73392261 + AluSx SINE Alu 1 306 -6 284 269 22 52 chr5 126238446 126238580 -73391570 + MER5A DNA MER1_type 1 130 -59 2011 306 146 60 chr5 126238624 126240339 -73389811 - L2 LINE L2 -461 2853 991 3179 152 30 3 chr5 126240581 126241147 -73389003 + L1MB3 LINE L1 5594 6174 -9 211 247 108 32 chr5 126241298 126241391 -73388759 - MIR SINE MIR -61 147 48 1921 219 83 30 chr5 126241627 126242449 -73387701 + L1ME1 LINE L1 3295 4197 -1949 2472 226 56 42 chr5 126242456 126242937 -73387213 + L1ME1 LINE L1 4697 5170 -996 1575 156 87 21 chr5 126242937 126243225 -73386925 + AluSx SINE Alu 1 307 -5 2472 226 56 42 chr5 126243225 126243540 -73386610 + L1ME1 LINE L1 5170 5479 -687 1815 158 14 7 chr5 126243540 126243837 -73386313 + AluJb SINE Alu 1 299 -13 2472 226 56 42 chr5 126243837 126244447 -73385703 + L1ME1 LINE L1 5479 6122 -44 509 265 12 19 chr5 126244329 126244491 -73385659 + L1MA10 LINE L1 6167 6327 -7 * 2215 112 0 0 chr5 126244672 126244975 -73385175 + AluSp SINE Alu 1 303 -10 2170 104 3 7 chr5 126245364 126245663 -73384487 + AluSq SINE Alu 1 298 -15 24 85 0 0 chr5 126245852 126245911 -73384239 + AT_rich Low_complexity Low_complexity 1 59 0 198 71 0 0 chr5 126246926 126246954 -73383196 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 30 27 0 0 chr5 126247719 126247756 -73382394 + AT_rich Low_complexity Low_complexity 1 37 0 309 195 98 24 chr5 126248398 126248480 -73381670 + MER5C DNA MER1_type 1 88 -236 1891 164 0 3 chr5 126248738 126249048 -73381102 + AluSx SINE Alu 1 309 -3 2319 76 0 7 chr5 126249055 126249369 -73380781 + AluY SINE Alu 1 312 0 21 0 0 0 chr5 126249933 126249954 -73380196 + AT_rich Low_complexity Low_complexity 1 21 0 793 231 0 81 chr5 126249990 126250092 -73380058 - MER58A DNA MER1_type -2204 216 107 1085 183 193 32 chr5 126250092 126250247 -73379903 - MER46B DNA MER2_type -2495 236 107 417 110 0 0 chr5 126250247 126250320 -73379830 + (TA)n Simple_repeat Simple_repeat 1 73 0 2030 96 4 4 chr5 126250320 126250590 -73379560 - AluSx SINE Alu -26 286 17 1085 183 193 32 chr5 126250590 126250744 -73379406 - MER46B DNA MER2_type -2623 108 1 793 231 0 81 chr5 126250744 126250875 -73379275 - MER58A DNA MER1_type -2313 107 2 11858 171 11 11 chr5 126250914 126253986 -73376164 + L1PA14 LINE L1 2959 6030 -131 1732 189 0 3 chr5 126253986 126254283 -73375867 + AluJb SINE Alu 1 296 -16 11858 171 11 11 chr5 126254283 126254365 -73375785 + L1PA14 LINE L1 6030 6110 -51 1393 152 30 4 chr5 126254349 126254613 -73375537 - L1 LINE L1 -1308 4838 4568 * 638 301 23 0 chr5 126254684 126254860 -73375290 + MER58A DNA MER1_type 1 180 -44 2339 90 0 0 chr5 126254887 126255188 -73374962 + AluSx SINE Alu 4 304 -8 1557 103 31 0 chr5 126255729 126255952 -73374198 - MER30 DNA MER1_type 0 230 1 428 188 113 15 chr5 126256105 126256238 -73373912 - HAL1 LINE L1 -124 2383 2238 547 261 67 24 chr5 126256267 126256520 -73373630 - HAL1 LINE L1 -336 2171 1908 1163 292 83 10 chr5 126256828 126257353 -73372797 + L1MC4a LINE L1 5580 5825 -340 4308 169 42 20 chr5 126257418 126258262 -73371888 - L1MB3 LINE L1 -1 6182 5321 701 162 22 29 chr5 126258264 126258400 -73371750 - AluJb SINE Alu -177 135 1 3682 178 71 3 chr5 126259008 126259606 -73370544 - L1MB3 LINE L1 -63 6120 5459 192 40 0 0 chr5 126259606 126259631 -73370519 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 3682 178 71 3 chr5 126259631 126259781 -73370369 - L1MB3 LINE L1 -724 5459 5321 638 157 37 30 chr5 126259783 126259917 -73370233 - AluJb SINE Alu -177 135 1 31 76 0 0 chr5 126260640 126260706 -73369444 + AT_rich Low_complexity Low_complexity 1 66 0 246 62 0 0 chr5 126260764 126260796 -73369354 + (CAT)n Simple_repeat Simple_repeat 1 32 0 777 311 259 27 chr5 126261030 126262608 -73367542 - L2 LINE L2 0 3313 1331 266 296 136 35 chr5 126262656 126262855 -73367295 + L1M4b LINE L1 11 229 -6630 265 250 0 163 chr5 126262946 126263118 -73367032 + L1M4b LINE L1 1013 1156 -5703 * 421 184 0 15 chr5 126263101 126263192 -73366958 + L1M4b LINE L1 2134 2257 -4702 185 156 0 0 chr5 126263192 126263224 -73366926 + L2 LINE L2 3282 3313 0 271 355 80 20 chr5 126263229 126263429 -73366721 - L2 LINE L2 -2814 500 289 4208 187 112 11 chr5 126263454 126264416 -73365734 - Tigger6a DNA MER2_type -1 1082 24 583 223 8 8 chr5 126266265 126266395 -73363755 - FLAM_A SINE Alu -3 130 1 2186 98 24 0 chr5 126266727 126267022 -73363128 + AluSx SINE Alu 1 302 -10 435 301 318 28 chr5 126267469 126268746 -73361404 - L2 LINE L2 -337 2977 1331 268 219 12 37 chr5 126469123 126469205 -73160945 + LTR16C LTR ERVL 410 489 -2 463 344 21 5 chr5 126469223 126469409 -73160741 + MER5A DNA MER1_type 1 189 0 338 263 25 17 chr5 126470257 126470326 -73159824 - MIR SINE MIR 0 262 190 1804 176 10 0 chr5 126470326 126470616 -73159534 - AluJo SINE Alu -19 293 1 338 263 25 17 chr5 126470616 126470664 -73159486 - MIR SINE MIR -72 190 144 365 0 0 0 chr5 126470664 126470704 -73159446 - THE1C LTR MaLR -335 40 1 192 210 32 32 chr5 126470704 126470766 -73159384 - MIR SINE MIR -104 158 97 224 30 30 0 chr5 126471238 126471271 -73158879 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7210 54 11 0 chr5 126471271 126472607 -73157543 - L1PA7 LINE L1 -18 6136 4788 5175 191 42 75 chr5 126476019 126476257 -73153893 - L1MC4 LINE L1 0 8042 7798 2277 78 0 0 chr5 126476257 126476569 -73153581 - AluSc SINE Alu 0 312 1 5175 191 42 75 chr5 126476569 126477765 -73152385 - L1MC4 LINE L1 -244 7798 6653 1342 105 0 0 chr5 126477866 126478037 -73152113 - AluSx SINE Alu -141 171 1 752 115 9 0 chr5 126478038 126478151 -73151999 - LTR39 LTR ERV1 -159 624 511 1918 132 7 43 chr5 126478151 126478455 -73151695 - AluJo SINE Alu -19 293 1 1897 116 47 0 chr5 126478455 126478732 -73151418 - LTR39 LTR ERV1 -493 290 1 251 292 62 54 chr5 126478743 126478873 -73151277 - L2 LINE L2 -194 3078 2948 773 108 0 0 chr5 126479069 126479171 -73150979 + U6 snRNA snRNA 1 102 -5 1513 140 55 8 chr5 126479201 126479458 -73150692 + AluJo SINE Alu 1 269 -43 687 95 11 0 chr5 126479559 126479654 -73150496 + AluY SINE Alu 196 291 -20 1325 165 40 0 chr5 126479744 126479993 -73150157 - L1MB7 LINE L1 -8 6176 5918 1670 205 0 0 chr5 126480386 126480698 -73149452 - AluSx SINE Alu 0 312 1 31 0 0 0 chr5 126480706 126480737 -73149413 + AT_rich Low_complexity Low_complexity 1 31 0 1824 138 53 0 chr5 126480857 126481140 -73149010 - AluSg SINE Alu -12 298 1 2301 102 0 0 chr5 126481152 126481447 -73148703 - AluSg SINE Alu -15 295 1 456 332 91 7 chr5 126481450 126481724 -73148426 + L2 LINE L2 2508 2804 -510 206 139 0 28 chr5 126481819 126481855 -73148295 - MIR SINE MIR -111 151 117 1608 157 17 44 chr5 126481956 126482249 -73147901 - AluJo SINE Alu -15 297 13 1404 169 12 12 chr5 126482500 126482742 -73147408 + AluSq SINE Alu 1 242 -71 240 35 0 0 chr5 126482744 126482773 -73147377 + (A)n Simple_repeat Simple_repeat 1 29 0 260 286 76 29 chr5 126482813 126482918 -73147232 - L2 LINE L2 -5 3308 3199 1751 146 57 4 chr5 126483051 126483331 -73146819 - AluJb SINE Alu -17 295 1 579 152 81 41 chr5 126483332 126483529 -73146621 - L1M4 LINE L1 -734 5440 5263 339 125 54 0 chr5 126484208 126484264 -73145886 - U7 snRNA snRNA -3 60 2 2278 109 0 28 chr5 126484285 126484606 -73145544 - AluSx SINE Alu 0 312 1 238 25 25 25 chr5 126484608 126484648 -73145502 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2411 34 0 0 chr5 126484648 126484917 -73145233 - AluY SINE Alu -30 281 13 1000 164 0 6 chr5 126485445 126485610 -73144540 + AluSg/x SINE Alu 102 265 -47 298 183 12 12 chr5 126485621 126485703 -73144447 + GA-rich Low_complexity Low_complexity 4 85 0 2545 54 0 13 chr5 126486439 126486753 -73143397 + AluY SINE Alu 1 310 -1 1536 103 0 0 chr5 126487002 126487196 -73142954 + AluSx SINE Alu 1 194 -118 1907 123 39 29 chr5 126487377 126487514 -73142636 + AluSx SINE Alu 1 135 -177 2223 110 0 0 chr5 126487514 126487813 -73142337 + AluSq SINE Alu 1 299 -14 1907 123 39 29 chr5 126487813 126487984 -73142166 + AluSx SINE Alu 135 312 0 414 102 0 0 chr5 126487984 126488033 -73142117 + AluSp SINE Alu 125 173 -140 1605 71 4 76 chr5 126488135 126488373 -73141777 - AluSg SINE Alu -89 221 1 1871 155 3 20 chr5 126489033 126489195 -73140955 - AluJb SINE Alu -14 298 142 2101 127 0 3 chr5 126489195 126489502 -73140648 - AluSx SINE Alu -6 306 1 1871 155 3 20 chr5 126489502 126489642 -73140508 - AluJb SINE Alu -170 142 1 1468 179 20 30 chr5 126489759 126490056 -73140094 - AluJo SINE Alu -18 294 1 638 137 0 0 chr5 126490066 126490161 -73139989 - AluSg/x SINE Alu -9 301 207 190 270 64 120 chr5 126491191 126491458 -73138692 - L2 LINE L2 -214 3058 2807 1045 182 6 0 chr5 126491856 126492021 -73138129 + FRAM SINE Alu 1 166 0 2377 103 3 0 chr5 126492035 126492346 -73137804 + AluSx SINE Alu 1 312 0 2212 99 3 3 chr5 126493012 126493305 -73136845 - AluSx SINE Alu -19 293 1 2279 108 0 0 chr5 126494758 126495065 -73135085 - AluSg SINE Alu -3 307 1 2003 121 37 3 chr5 126495066 126495363 -73134787 - AluSx SINE Alu -5 307 1 911 157 0 8 chr5 126495724 126495948 -73134202 + AluJb SINE Alu 1 293 -19 2070 132 13 0 chr5 126496183 126496487 -73133663 + AluSx SINE Alu 1 308 -4 812 189 0 26 chr5 126496645 126496820 -73133330 - AluJo SINE Alu 0 304 134 1588 118 0 0 chr5 126497138 126497350 -73132800 - AluSg SINE Alu -98 212 1 718 163 0 78 chr5 126497352 126497493 -73132657 - AluJo SINE Alu -181 131 2 1372 158 108 18 chr5 126497549 126497828 -73132322 - AluJb SINE Alu -8 304 1 38 0 0 0 chr5 126498354 126498392 -73131758 + AT_rich Low_complexity Low_complexity 1 38 0 1885 112 0 4 chr5 126498799 126499058 -73131092 - AluSx SINE Alu -8 304 47 1876 111 35 14 chr5 126499323 126499448 -73130702 + AluSx SINE Alu 1 122 -190 2458 67 0 3 chr5 126499448 126499745 -73130405 + AluSx SINE Alu 1 296 -16 1876 111 35 14 chr5 126499745 126499907 -73130243 + AluSx SINE Alu 122 294 -18 242 270 0 16 chr5 126500511 126500574 -73129576 + MIR SINE MIR 86 147 -61 2322 62 0 28 chr5 126500747 126501067 -73129083 - AluY SINE Alu 0 311 1 973 95 0 0 chr5 126501067 126501193 -73128957 - AluSq/x SINE Alu -176 136 11 877 171 26 73 chr5 126501861 126502095 -73128055 + AluJo SINE Alu 82 304 -8 757 185 0 0 chr5 126502259 126502378 -73127772 - AluJb SINE Alu -46 266 148 1639 133 0 0 chr5 126502378 126502603 -73127547 - AluSq SINE Alu -54 259 35 421 331 41 12 chr5 126502904 126503073 -73127077 + MIR SINE MIR 13 186 -76 340 57 0 38 chr5 126503248 126503301 -73126849 - FLAM_A SINE Alu 0 133 83 2163 129 3 0 chr5 126503302 126503605 -73126545 - AluSx SINE Alu -8 304 1 2269 116 3 3 chr5 126503614 126503924 -73126226 - AluSx SINE Alu -2 310 1 2177 104 0 10 chr5 126504074 126504402 -73125748 - AluSx SINE Alu 0 325 1 1644 180 25 0 chr5 126504728 126505011 -73125139 - AluJo SINE Alu -22 290 1 2386 68 0 16 chr5 126505257 126505564 -73124586 - AluY SINE Alu -7 304 3 519 222 37 0 chr5 126505593 126505701 -73124449 - FRAM SINE Alu -13 163 52 764 230 15 35 chr5 126505806 126506006 -73124144 + L1ME2 LINE L1 5864 6059 -105 2374 93 0 6 chr5 126506164 126506477 -73123673 - AluSq SINE Alu -2 311 1 2088 101 34 10 chr5 126506478 126506775 -73123375 - AluSx SINE Alu -8 304 1 2511 61 0 7 chr5 126506786 126507096 -73123054 - AluY SINE Alu -3 308 1 1198 117 0 0 chr5 126507101 126507264 -73122886 - AluSg/x SINE Alu -16 294 132 2272 94 0 0 chr5 126507264 126507563 -73122587 - AluY SINE Alu -12 299 1 1005 287 69 31 chr5 126507637 126508118 -73122032 + L1MEc LINE L1 37 535 -5861 1015 220 82 88 chr5 126508213 126508471 -73121679 + L1MEc LINE L1 790 1045 -5351 913 119 8 15 chr5 126508471 126508605 -73121545 - FLAM_C SINE Alu 0 133 1 1015 220 82 88 chr5 126508605 126508855 -73121295 + L1MEc LINE L1 1045 1295 -5101 5381 29 5 0 chr5 126509233 126509821 -73120329 - LTR10C LTR ERV1 0 591 1 1246 162 9 0 chr5 126509957 126510167 -73119983 - AluSg/x SINE Alu 0 312 101 25 0 0 0 chr5 126510574 126510599 -73119551 + AT_rich Low_complexity Low_complexity 1 25 0 1519 116 9 0 chr5 126510684 126510899 -73119251 - AluSg/x SINE Alu 0 312 96 309 274 155 12 chr5 126511137 126511206 -73118944 + L2 LINE L2 2644 2702 -612 221 0 0 33 chr5 126511206 126511236 -73118914 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 309 274 155 12 chr5 126511236 126511334 -73118816 + L2 LINE L2 2702 2835 -479 801 154 8 32 chr5 126511351 126511474 -73118676 - FLAM_C SINE Alu -22 121 2 856 160 0 0 chr5 126511793 126511918 -73118232 - FLAM_C SINE Alu -18 125 1 1326 204 79 14 chr5 126512193 126512473 -73117677 + AluJo SINE Alu 1 298 -14 907 146 51 22 chr5 126512590 126512768 -73117382 - AluJ SINE Alu -1 311 129 1789 81 170 15 chr5 126512770 126513029 -73117121 - AluSg SINE Alu 0 300 2 980 143 0 0 chr5 126513039 126513172 -73116978 - AluJ SINE Alu -169 133 1 201 39 0 0 chr5 126513398 126513424 -73116726 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 273 298 193 14 chr5 126514419 126514623 -73115527 - MIR SINE MIR -19 243 7 21 0 0 0 chr5 126514986 126515007 -73115143 + AT_rich Low_complexity Low_complexity 1 21 0 2392 81 3 0 chr5 126515569 126515866 -73114284 - AluSp SINE Alu -15 298 1 189 0 0 0 chr5 126517676 126517697 -73112453 + (T)n Simple_repeat Simple_repeat 1 21 0 935 102 0 0 chr5 126517716 126517834 -73112316 - AluSq/x SINE Alu -195 118 1 2390 87 0 0 chr5 126519528 126519838 -73110312 - AluSg SINE Alu 0 310 1 1996 128 3 0 chr5 126520448 126520760 -73109390 - AluSx SINE Alu 0 312 1 1999 125 10 0 chr5 126521295 126521592 -73108558 - AluSx SINE Alu -12 300 1 310 195 109 109 chr5 126522465 126522501 -73107649 - MER5A DNA MER1_type -14 175 140 288 0 0 0 chr5 126522501 126522533 -73107617 + (CA)n Simple_repeat Simple_repeat 2 33 0 310 195 109 109 chr5 126522533 126522624 -73107526 - MER5A DNA MER1_type -48 141 48 2186 93 0 29 chr5 126522624 126523003 -73107147 - AluSc SINE Alu 0 370 1 * 2283 100 0 3 chr5 126523002 126523313 -73106837 - AluSq SINE Alu -3 310 1 851 152 8 0 chr5 126523386 126523518 -73106632 - FLAM_C SINE Alu 0 133 1 2232 76 3 3 chr5 126523810 126524101 -73106049 + AluSp SINE Alu 1 291 -22 1832 150 38 0 chr5 126524142 126524435 -73105715 + AluJo SINE Alu 1 304 -8 2397 87 0 0 chr5 126524499 126524808 -73105342 + AluSx SINE Alu 3 311 -1 1851 165 0 16 chr5 126524811 126525126 -73105024 + AluJo SINE Alu 3 312 0 1377 188 19 49 chr5 126525649 126525957 -73104193 - AluJo SINE Alu -13 299 1 1808 161 7 0 chr5 126526261 126526553 -73103597 - AluSx SINE Alu -14 298 5 1724 136 36 46 chr5 126526587 126526889 -73103261 - AluSx SINE Alu -13 299 1 2507 50 0 3 chr5 126526922 126527224 -73102926 + AluY SINE Alu 1 301 -10 199 339 77 30 chr5 126528205 126528438 -73101712 - L2 LINE L2 -222 3050 2807 1004 182 6 0 chr5 126528836 126529001 -73101149 + FRAM SINE Alu 1 166 0 2240 113 3 0 chr5 126529015 126529326 -73100824 + AluSx SINE Alu 1 312 0 1705 194 0 0 chr5 126529326 126529635 -73100515 + AluJb SINE Alu 1 309 -3 357 309 200 22 chr5 126529789 126530064 -73100086 + L3 LINE CR1 1243 1566 -11 1201 154 35 5 chr5 126530281 126530482 -73099668 - AluJb SINE Alu -19 293 87 203 295 25 74 chr5 126531274 126531396 -73098754 - MIR SINE MIR -53 209 94 640 96 0 0 chr5 126531521 126531604 -73098546 + AluS SINE Alu 2 84 -229 972 219 33 38 chr5 126532221 126532312 -73097838 + MER51C LTR ERV1 329 419 -221 1635 132 7 90 chr5 126532312 126532622 -73097528 - AluSx SINE Alu -14 298 15 972 219 33 38 chr5 126532622 126532867 -73097283 + MER51C LTR ERV1 419 640 0 1895 117 35 0 chr5 126533228 126533511 -73096639 + AluSx SINE Alu 1 293 -19 1003 203 110 17 chr5 126533699 126533783 -73096367 + AluJb SINE Alu 24 99 -213 228 35 0 0 chr5 126533783 126533812 -73096338 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1003 203 110 17 chr5 126533812 126533964 -73096186 + AluJb SINE Alu 99 282 -30 2226 177 47 0 chr5 126533964 126534393 -73095757 - L1MB2 LINE L1 -17 6154 5706 384 196 130 0 chr5 126534761 126534853 -73095297 - MER53 DNA DNA -84 105 2 840 194 0 74 chr5 126535122 126535297 -73094853 + AluJo SINE Alu 126 287 -25 756 197 0 29 chr5 126535312 126535468 -73094682 - FLAM_C SINE Alu 0 152 1 2181 97 0 0 chr5 126535475 126535764 -73094386 - AluSg SINE Alu -21 289 1 208 295 148 40 chr5 126536512 126536661 -73093489 + L2 LINE L2 3107 3271 -1 2067 115 0 3 chr5 126536674 126536978 -73093172 + AluSg SINE Alu 1 303 -7 1366 137 106 14 chr5 126537391 126537610 -73092540 + MER33 DNA MER1_type 1 255 -2330 1886 151 3 13 chr5 126537610 126537915 -73092235 - AluJb SINE Alu -10 302 1 1366 137 106 14 chr5 126537915 126537987 -73092163 + MER33 DNA MER1_type 255 319 -5 1921 140 0 28 chr5 126538064 126538385 -73091765 - AluSx SINE Alu 0 312 1 186 292 123 0 chr5 126539337 126539402 -73090748 + L2 LINE L2 3240 3312 -1 1510 172 48 0 chr5 126539633 126539929 -73090221 + AluJb SINE Alu 11 312 0 496 251 21 70 chr5 126545068 126545154 -73084996 - MER45A DNA AcHobo -1403 178 104 352 89 54 0 chr5 126545154 126545210 -73084940 + U7 snRNA snRNA 2 60 -3 496 251 21 70 chr5 126545210 126545310 -73084840 - MER45A DNA AcHobo -1477 104 1 957 141 0 0 chr5 126545656 126545798 -73084352 - AluJb SINE Alu -33 279 138 184 339 0 18 chr5 126546933 126546989 -73083161 + MIR3 SINE MIR 14 68 -140 1855 160 7 0 chr5 126547131 126547425 -73082725 - AluJo SINE Alu -16 296 1 1406 169 81 28 chr5 126547432 126547716 -73082434 - AluJo SINE Alu -11 301 3 243 304 247 0 chr5 126547889 126548047 -73082103 + L2 LINE L2 2868 3064 -208 2209 94 0 0 chr5 126551629 126551927 -73078223 - AluSg SINE Alu -12 298 1 1454 214 146 8 chr5 126551998 126552376 -73077774 + MLT1C LTR MaLR 7 436 -31 303 305 46 23 chr5 126554216 126554347 -73075803 - MIR SINE MIR -83 179 46 204 191 118 44 chr5 126555079 126555147 -73075003 + MIR3 SINE MIR 105 177 -31 1940 90 65 0 chr5 126557504 126557781 -73072369 - AluSx SINE Alu -17 295 1 338 273 34 57 chr5 126558147 126558323 -73071827 - MER5A DNA MER1_type -7 182 11 1637 119 27 19 chr5 126560009 126560269 -73069881 - AluSx SINE Alu -11 301 40 1979 113 31 0 chr5 126560561 126560853 -73069297 - AluSx SINE Alu -11 301 1 463 284 157 5 chr5 126561861 126562058 -73068092 - MIR SINE MIR 0 262 36 238 284 0 49 chr5 126563120 126563201 -73066949 - MIR SINE MIR -82 180 104 455 227 36 27 chr5 126564395 126564505 -73065645 + MIR SINE MIR 49 159 -103 2073 112 3 0 chr5 126564506 126564793 -73065357 + AluSp SINE Alu 1 288 -25 7629 13 0 0 chr5 126564804 126565964 -73064186 + L1HS LINE L1 4996 6155 0 192 111 0 0 chr5 126566052 126566088 -73064062 + (A)n Simple_repeat Simple_repeat 1 36 0 414 278 9 0 chr5 126566127 126566242 -73063908 + MIR SINE MIR 126 241 -21 620 82 47 39 chr5 126566243 126566727 -73063423 + (TG)n Simple_repeat Simple_repeat 1 487 0 1377 215 0 13 chr5 126567186 126567484 -73062666 + AluJb SINE Alu 12 305 -7 1778 87 12 103 chr5 126567490 126567621 -73062529 + AluSq SINE Alu 4 145 -168 2185 97 0 34 chr5 126567621 126567942 -73062208 + AluY SINE Alu 1 310 -1 1778 87 12 103 chr5 126567942 126568131 -73062019 + AluSq SINE Alu 145 295 -18 1988 130 17 0 chr5 126568140 126568439 -73061711 + AluSx SINE Alu 1 304 -8 2275 87 45 0 chr5 126568504 126568793 -73061357 + AluSq SINE Alu 1 300 -13 787 182 8 0 chr5 126568961 126569093 -73061057 + AluJo SINE Alu 1 133 -179 229 101 58 14 chr5 126569097 126569129 -73061021 + (TA)n Simple_repeat Simple_repeat 1 30 -42 2232 117 0 3 chr5 126569129 126569429 -73060721 + AluSx SINE Alu 1 299 -13 229 101 58 14 chr5 126569429 126569465 -73060685 + (TA)n Simple_repeat Simple_repeat 30 72 0 * 941 165 55 22 chr5 126569460 126569642 -73060508 + AluJo SINE Alu 125 312 0 2197 119 0 0 chr5 126569650 126569963 -73060187 + AluSq SINE Alu 1 313 0 936 130 0 27 chr5 126570041 126570187 -73059963 + AluSg/x SINE Alu 154 295 -15 181 329 0 13 chr5 126571278 126571354 -73058796 + L2 LINE L2 3198 3272 0 624 289 182 12 chr5 126573029 126573394 -73056756 + L2 LINE L2 2734 3152 -161 876 142 0 8 chr5 126573404 126573538 -73056612 - AluJb SINE Alu -179 133 1 2589 62 7 0 chr5 126573561 126573870 -73056280 - AluY SINE Alu 0 311 1 325 269 41 76 chr5 126573929 126574074 -73056076 + L2 LINE L2 3133 3272 0 2057 147 7 0 chr5 126574113 126574412 -73055738 - AluJb SINE Alu -3 309 9 1430 181 12 94 chr5 126574699 126575030 -73055120 - AluJb SINE Alu -8 304 1 2213 107 7 3 chr5 126575032 126575331 -73054819 - AluSg SINE Alu -10 300 1 871 69 0 0 chr5 126575331 126575432 -73054718 - AluSq/x SINE Alu -177 135 35 1243 190 0 9 chr5 126575586 126575797 -73054353 - AluJo SINE Alu -19 293 85 2259 134 0 0 chr5 126575805 126576118 -73054032 - AluSq SINE Alu 0 313 1 2218 133 0 16 chr5 126576324 126576698 -73053452 - AluSx SINE Alu 0 369 1 868 125 20 13 chr5 126576701 126576853 -73053297 - MLT1A1 LTR MaLR -212 153 1 257 258 91 45 chr5 126576858 126576990 -73053160 - MLT1J2 LTR MaLR -220 230 93 477 345 140 18 chr5 126577208 126577652 -73052498 + L2 LINE L2 2245 2742 -572 2300 98 9 19 chr5 126577768 126578083 -73052067 + AluSx SINE Alu 1 312 0 602 0 27 0 chr5 126578086 126578159 -73051991 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 383 319 146 0 chr5 126578283 126578427 -73051723 + L2 LINE L2 3107 3271 -1 1332 77 111 5 chr5 126578475 126578683 -73051467 - MER30 DNA MER1_type 0 230 1 252 0 0 0 chr5 126578773 126578801 -73051349 + (CA)n Simple_repeat Simple_repeat 2 29 0 2185 141 3 0 chr5 126578905 126579217 -73050933 - AluSq SINE Alu 0 313 1 41 0 0 0 chr5 126579218 126579259 -73050891 + AT_rich Low_complexity Low_complexity 1 41 0 2397 96 0 0 chr5 126579259 126579551 -73050599 - AluSx SINE Alu -20 292 1 597 194 108 96 chr5 126580415 126580750 -73049400 + LTR37A LTR ERV1 1 339 -87 404 92 0 0 chr5 126580762 126580827 -73049323 - Alu SINE Alu -3 309 245 2272 107 3 25 chr5 126580883 126581200 -73048950 - AluSx SINE Alu -2 310 1 22 0 0 0 chr5 126581226 126581248 -73048902 + AT_rich Low_complexity Low_complexity 1 22 0 573 257 54 7 chr5 126583459 126583607 -73046543 - MIR SINE MIR -80 182 28 2218 112 3 3 chr5 126584722 126585016 -73045134 + AluSx SINE Alu 1 294 -18 438 330 89 10 chr5 126585143 126585346 -73044804 - MIR SINE MIR -32 230 12 266 273 8 98 chr5 126585786 126585877 -73044273 + MER5A DNA MER1_type 45 122 -67 2402 89 3 0 chr5 126585877 126586170 -73043980 - AluSp SINE Alu -19 294 1 266 273 8 98 chr5 126586170 126586210 -73043940 + MER5A DNA MER1_type 122 164 -25 1112 118 0 86 chr5 126586274 126586460 -73043690 - AluSg/x SINE Alu -9 303 134 2226 135 0 0 chr5 126586460 126586771 -73043379 - AluSx SINE Alu -1 311 1 361 312 40 30 chr5 126586775 126586977 -73043173 + L2 LINE L2 2692 2895 -419 2243 124 3 0 chr5 126587431 126587737 -73042413 + AluSx SINE Alu 6 312 0 316 229 27 145 chr5 126587900 126588162 -73041988 + HAL1 LINE L1 2 232 -2275 533 277 50 120 chr5 126588271 126588730 -73041420 + HAL1 LINE L1 415 841 -1666 979 221 26 19 chr5 126588773 126589040 -73041110 + HAL1 LINE L1 1374 1642 -865 1991 98 15 95 chr5 126589040 126589376 -73040774 + AluSc SINE Alu 1 309 0 492 220 20 129 chr5 126589382 126589582 -73040568 + HAL1 LINE L1 2281 2449 -58 1651 199 11 0 chr5 126589582 126589869 -73040281 - AluJo SINE Alu -22 290 1 492 220 20 129 chr5 126589869 126589923 -73040227 + HAL1 LINE L1 2449 2507 0 21 36 0 0 chr5 126589925 126589953 -73040197 + AT_rich Low_complexity Low_complexity 1 28 0 2192 124 3 10 chr5 126590041 126590347 -73039803 - AluSx SINE Alu -8 304 1 312 182 0 100 chr5 126590397 126590507 -73039643 - MER53 DNA DNA -89 100 2 3060 126 53 54 chr5 126591376 126592021 -73038129 + LTR48B LTR ERV1 1 644 0 547 148 0 37 chr5 126592135 126592243 -73037907 + FLAM_C SINE Alu 39 142 -1 31 44 0 0 chr5 126592298 126592343 -73037807 + AT_rich Low_complexity Low_complexity 1 45 0 523 326 162 10 chr5 126592390 126592792 -73037358 - L3 LINE CR1 -118 1459 997 189 0 0 0 chr5 126593230 126593251 -73036899 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2014 136 0 7 chr5 126593253 126593539 -73036611 - AluSx SINE Alu -28 284 1 372 182 182 0 chr5 126593549 126593663 -73036487 - FLAM_A SINE Alu 0 153 26 2877 3 0 0 chr5 126593780 126594080 -73036070 - AluYa5 SINE Alu 0 311 12 2400 82 3 0 chr5 126594085 126594377 -73035773 - AluSx SINE Alu -19 293 1 2287 117 0 7 chr5 126594765 126595074 -73035076 + AluSx SINE Alu 1 307 -5 1525 155 9 13 chr5 126595339 126595571 -73034579 + AluJo SINE Alu 1 231 -81 198 0 0 0 chr5 126595598 126595620 -73034530 + (A)n Simple_repeat Simple_repeat 1 22 0 2008 111 34 20 chr5 126595620 126595917 -73034233 + AluSg SINE Alu 1 301 -9 670 136 59 71 chr5 126595946 126596115 -73034035 - LTR48B LTR ERV1 -3 641 475 294 0 43 21 chr5 126596276 126596323 -73033827 + (TG)n Simple_repeat Simple_repeat 2 49 0 186 297 47 0 chr5 126597774 126597838 -73032312 + MIR SINE MIR 125 191 -71 2484 81 0 0 chr5 126599083 126599392 -73030758 + AluSc SINE Alu 1 309 0 1757 155 84 3 chr5 126599466 126599750 -73030400 + AluJo SINE Alu 1 307 -5 1829 159 0 46 chr5 126599750 126600076 -73030074 + AluJb SINE Alu 1 311 -1 635 278 40 40 chr5 126600097 126600324 -73029826 - MIR SINE MIR -7 255 29 185 245 41 0 chr5 126600858 126600907 -73029243 + L2 LINE L2 3218 3268 -4 881 148 7 0 chr5 126601060 126601195 -73028955 + AluJo SINE Alu 1 136 -176 1819 168 7 3 chr5 126601209 126601494 -73028656 + AluJb SINE Alu 1 286 -26 187 31 62 0 chr5 126601498 126601530 -73028620 + A-rich Low_complexity Low_complexity 2 35 0 2223 108 14 3 chr5 126603065 126603360 -73026790 - AluSx SINE Alu -14 298 1 1075 125 0 0 chr5 126603360 126603496 -73026654 - AluSq/x SINE Alu -176 136 1 187 310 160 19 chr5 126603507 126603720 -73026430 + L2 LINE L2 3020 3262 -51 501 315 61 17 chr5 126604249 126604430 -73025720 - MIR SINE MIR -28 234 46 388 330 124 16 chr5 126604660 126604975 -73025175 + L2 LINE L2 2923 3271 -1 2407 88 0 0 chr5 126605957 126606252 -73023898 - AluSx SINE Alu -17 295 1 464 301 49 0 chr5 126606274 126606397 -73023753 + L2 LINE L2 3134 3262 -10 1006 155 13 0 chr5 126606397 126606598 -73023552 + AluJb SINE Alu 127 329 0 189 0 0 0 chr5 126606618 126606639 -73023511 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 328 231 0 0 chr5 126607029 126607094 -73023056 - MIR SINE MIR -111 151 87 2304 120 0 13 chr5 126609031 126609347 -73020803 - AluSx SINE Alu 0 312 1 2283 94 11 0 chr5 126609412 126609698 -73020452 + AluSg SINE Alu 5 293 -17 2051 122 21 3 chr5 126609711 126609997 -73020153 + AluSx SINE Alu 1 291 -21 2372 104 0 3 chr5 126609997 126610304 -73019846 + AluSp SINE Alu 1 306 -7 183 235 20 20 chr5 126610310 126610361 -73019789 + MER5B DNA MER1_type 59 109 -69 1969 156 0 47 chr5 126612206 126612526 -73017624 + AluJo SINE Alu 1 305 -7 2266 94 3 13 chr5 126613241 126613377 -73016773 + AluSx SINE Alu 1 137 -175 2551 59 0 7 chr5 126613377 126613717 -73016433 + AluY SINE Alu 1 311 0 2266 94 3 13 chr5 126613717 126613879 -73016271 + AluSx SINE Alu 137 296 -16 474 268 210 37 chr5 126614227 126614499 -73015651 + L2 LINE L2 2485 2803 -511 819 249 15 5 chr5 126615201 126615406 -73014744 + MIR SINE MIR 56 262 0 400 263 110 8 chr5 126616322 126616440 -73013710 - L2 LINE L2 0 3272 3143 198 293 17 0 chr5 126617698 126617756 -73012394 - MIR SINE MIR -181 81 23 357 282 51 23 chr5 126618466 126618640 -73011510 - MIR SINE MIR -67 141 12 1915 155 3 0 chr5 126618712 126619003 -73011147 + AluJb SINE Alu 19 310 -2 186 103 0 0 chr5 126619066 126619095 -73011055 + (CAGCC)n Simple_repeat Simple_repeat 1 29 0 424 209 43 17 chr5 126619323 126619438 -73010712 - Charlie8 DNA MER1_type -2266 151 34 686 263 73 101 chr5 126620396 126620559 -73009591 + L2 LINE L2 2538 2704 -609 1977 155 37 0 chr5 126620559 126620856 -73009294 + AluJb SINE Alu 5 312 0 * 2148 132 0 7 chr5 126620855 126621150 -73009000 + AluSx SINE Alu 1 293 -19 686 263 73 101 chr5 126620856 126621164 -73008986 + L2 LINE L2 2704 2698 -615 749 185 0 15 chr5 126621164 126621299 -73008851 + FLAM_A SINE Alu 1 133 0 686 263 73 101 chr5 126621299 126621661 -73008489 + L2 LINE L2 2697 3068 -245 456 246 127 77 chr5 126623098 126623318 -73006832 - MIR SINE MIR 0 262 32 201 208 42 0 chr5 126625507 126625555 -73004595 + GA-rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr5 126625563 126625587 -73004563 + GC_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr5 126625820 126625860 -73004290 + GC_rich Low_complexity Low_complexity 1 40 0 38 22 0 0 chr5 126626369 126626414 -73003736 + GC_rich Low_complexity Low_complexity 1 45 0 225 175 53 0 chr5 126626594 126626651 -73003499 + (CGAG)n Simple_repeat Simple_repeat 3 62 0 23 33 0 0 chr5 126626824 126626854 -73003296 + GC_rich Low_complexity Low_complexity 1 30 0 25 65 0 0 chr5 126626879 126626925 -73003225 + GC_rich Low_complexity Low_complexity 1 46 0 347 296 17 0 chr5 126629237 126629352 -73000798 + MIR3 SINE MIR 38 154 -54 285 263 61 44 chr5 126629709 126629823 -73000327 - MIR3 SINE MIR -92 116 1 218 301 126 77 chr5 126630258 126630295 -72999855 - L2 LINE L2 -30 3283 3249 203 0 0 36 chr5 126630295 126630323 -72999827 + (CA)n Simple_repeat Simple_repeat 2 28 0 218 301 126 77 chr5 126630323 126630346 -72999804 - L2 LINE L2 -64 3249 3229 1081 115 23 0 chr5 126630346 126630520 -72999630 + L1PA11 LINE L1 5997 6174 0 218 301 126 77 chr5 126630520 126630744 -72999406 - L2 LINE L2 -84 3229 2984 1693 167 98 83 chr5 126630822 126631302 -72998848 + Charlie4a DNA MER1_type 18 504 -4 3091 246 80 13 chr5 126631311 126632300 -72997850 - L2 LINE L2 -359 2954 1819 237 380 44 0 chr5 126632411 126632524 -72997626 - L2 LINE L2 -5 3267 3150 512 291 0 8 chr5 126632622 126632756 -72997394 + MIR SINE MIR 15 147 -115 2536 87 0 0 chr5 126632816 126633126 -72997024 - AluSx SINE Alu -2 310 1 2115 119 18 0 chr5 126633132 126633418 -72996732 - AluSq SINE Alu -22 291 1 273 316 0 0 chr5 126633420 126633499 -72996651 - MER5A DNA MER1_type -50 139 61 1318 113 0 0 chr5 126633537 126633705 -72996445 - AluSq SINE Alu -145 168 1 928 143 0 0 chr5 126633880 126634013 -72996137 - FLAM_C SINE Alu -10 133 1 783 108 0 0 chr5 126634022 126634142 -72996008 + (TA)n Simple_repeat Simple_repeat 2 121 0 1189 129 0 0 chr5 126634142 126634305 -72995845 - AluSg/x SINE Alu -16 294 132 2441 70 0 3 chr5 126634305 126634603 -72995547 - AluSq SINE Alu -14 299 3 1294 139 45 0 chr5 126634728 126634929 -72995221 - 7SLRNA srpRNA srpRNA -110 210 1 33 0 0 0 chr5 126635220 126635253 -72994897 + AT_rich Low_complexity Low_complexity 1 33 0 1555 98 5 5 chr5 126635253 126635457 -72994693 - AluSx SINE Alu -108 204 1 2059 138 0 19 chr5 126635458 126635776 -72994374 - AluJo SINE Alu 0 312 1 2048 110 3 24 chr5 126635792 126636111 -72994039 - AluSx SINE Alu 0 313 1 340 197 0 0 chr5 126636112 126636173 -72993977 - MER5A DNA MER1_type -116 73 13 278 269 39 58 chr5 126636416 126636520 -72993630 - L2 LINE L2 -3 3269 3168 1857 171 3 22 chr5 126637098 126637414 -72992736 - AluJo SINE Alu -2 310 1 868 210 0 0 chr5 126637484 126637651 -72992499 + FRAM SINE Alu 1 167 -9 2370 56 52 3 chr5 126637657 126637943 -72992207 + AluY SINE Alu 1 300 -11 293 296 0 11 chr5 126638467 126638573 -72991577 + L1MC/D LINE L1 5670 5774 -347 1953 148 30 20 chr5 126638601 126638738 -72991412 + AluJb SINE Alu 1 135 -177 2500 73 3 0 chr5 126638738 126639038 -72991112 + AluSq SINE Alu 1 301 -12 1953 148 30 20 chr5 126639038 126639205 -72990945 + AluJb SINE Alu 135 308 -4 2555 74 0 0 chr5 126639307 126639616 -72990534 + AluY SINE Alu 1 309 -2 216 122 0 0 chr5 126639673 126639714 -72990436 + (A)n Simple_repeat Simple_repeat 1 41 0 343 82 16 16 chr5 126641587 126641648 -72988502 + (TG)n Simple_repeat Simple_repeat 2 62 0 1948 154 7 3 chr5 126641924 126642217 -72987933 + AluJo SINE Alu 5 298 -14 849 207 6 12 chr5 126642762 126642931 -72987219 + MLT1D LTR MaLR 1 168 -337 363 248 22 15 chr5 126642933 126643096 -72987054 + L2 LINE L2 2843 3006 -307 265 328 141 28 chr5 126643534 126643711 -72986439 - L2 LINE L2 0 3272 3076 1156 251 61 54 chr5 126643804 126644050 -72986100 - MLT1C LTR MaLR -4 463 220 1718 170 0 14 chr5 126644050 126644333 -72985817 - AluJo SINE Alu -33 279 1 1156 251 61 54 chr5 126644333 126644368 -72985782 - MLT1C LTR MaLR -247 220 187 635 153 9 0 chr5 126644368 126644479 -72985671 - L1MA4 LINE L1 -7 6293 6182 1156 251 61 54 chr5 126644479 126644623 -72985527 - MLT1C LTR MaLR -280 187 34 2483 83 3 6 chr5 126644625 126644939 -72985211 - AluSp SINE Alu 0 313 1 1059 182 0 0 chr5 126645240 126645410 -72984740 - AluJb SINE Alu -6 306 137 458 179 36 0 chr5 126645555 126645639 -72984511 + AluJ/FLAM SINE Alu 1 87 -225 182 286 71 20 chr5 126645639 126645737 -72984413 - L3 LINE CR1 -37 1540 1438 2262 98 3 3 chr5 126647004 126647300 -72982850 - AluSq SINE Alu -16 297 2 2241 106 6 13 chr5 126647315 126647627 -72982523 - AluSg SINE Alu 0 310 1 609 270 103 0 chr5 126648487 126648661 -72981489 + MIR SINE MIR 57 248 -14 466 219 18 35 chr5 126649455 126649569 -72980581 - MER81 DNA DNA 0 114 3 987 185 111 32 chr5 126649653 126649728 -72980422 + MER58B DNA MER1_type 4 72 -2348 2425 103 0 0 chr5 126649728 126650029 -72980121 - AluSx SINE Alu -11 301 1 987 185 111 32 chr5 126650029 126650237 -72979913 + MER58B DNA MER1_type 72 340 -1 189 352 42 14 chr5 126650351 126650422 -72979728 - MIR SINE MIR -107 101 29 1982 128 3 7 chr5 126651414 126651724 -72978426 - AluSx SINE Alu 0 309 1 1727 141 112 0 chr5 126651769 126652081 -72978069 + Tigger3(Golem) DNA MER2_type 1 347 -2682 2389 101 0 0 chr5 126652081 126652388 -72977762 + AluSg SINE Alu 3 309 -1 2760 140 56 62 chr5 126652388 126652437 -72977713 + Tigger3(Golem) DNA MER2_type 2426 2474 -555 3076 79 22 7 chr5 126652437 126652454 -72977696 + L1PA11 LINE L1 5724 5739 -435 727 122 0 0 chr5 126652454 126652561 -72977589 + U6 snRNA snRNA 1 107 0 3076 79 22 7 chr5 126652561 126652987 -72977163 + L1PA11 LINE L1 5739 6174 0 2760 140 56 62 chr5 126652987 126653056 -72977094 + Tigger3(Golem) DNA MER2_type 2474 2542 -487 1421 138 106 58 chr5 126653056 126653331 -72976819 - AluJo SINE Alu -24 288 1 2760 140 56 62 chr5 126653331 126653377 -72976773 + Tigger3(Golem) DNA MER2_type 2542 2587 -442 1861 162 3 48 chr5 126653377 126653691 -72976459 - AluJb SINE Alu -12 300 1 2760 140 56 62 chr5 126653691 126653864 -72976286 + Tigger3(Golem) DNA MER2_type 2587 2760 -269 2255 101 3 20 chr5 126653864 126654162 -72975988 - AluSx SINE Alu -19 293 1 2760 140 56 62 chr5 126654162 126654429 -72975721 + Tigger3(Golem) DNA MER2_type 2760 3029 0 1676 212 157 16 chr5 126654429 126654944 -72975206 - L1ME3A LINE L1 -27 6143 5556 2153 69 98 4 chr5 126655118 126655394 -72974756 - AluSx SINE Alu -10 302 1 974 170 30 3 chr5 126655622 126655860 -72974290 - AluJb SINE Alu 0 312 2 2158 131 23 0 chr5 126655873 126656178 -72973972 - AluSx SINE Alu 0 312 1 2578 63 0 0 chr5 126656650 126656951 -72973199 + AluY SINE Alu 1 301 -10 1252 279 81 61 chr5 126657591 126658162 -72971988 - MLT1K LTR MaLR -6 582 1 1037 188 0 0 chr5 126658552 126658722 -72971428 - FRAM SINE Alu -6 170 1 956 278 37 96 chr5 126658776 126659349 -72970801 + LTR67 LTR ERVL 9 547 -10 239 310 115 0 chr5 126659364 126659451 -72970699 - MIR SINE MIR -67 141 45 216 302 158 14 chr5 126659433 126659572 -72970578 + L3 LINE CR1 1312 1470 -107 * 5235 252 138 9 chr5 126660968 126662892 -72967258 - L2 LINE L2 -1034 2280 109 2042 144 0 26 chr5 126663046 126663352 -72966798 + AluSx SINE Alu 1 298 -14 316 310 84 71 chr5 126663380 126663606 -72966544 + L1M4 LINE L1 4791 5019 -1127 2524 187 115 31 chr5 126663621 126664194 -72965956 + L1ME1 LINE L1 4824 5347 -819 2349 116 0 0 chr5 126664194 126664505 -72965645 + AluSx SINE Alu 1 311 -1 2524 187 115 31 chr5 126664505 126664970 -72965180 + L1ME1 LINE L1 5347 5957 -209 1024 330 63 9 chr5 126665079 126665432 -72964718 + LTR16A LTR ERVL 1 382 -68 1698 160 51 106 chr5 126665432 126665497 -72964653 - MSTB LTR MaLR 0 426 359 2292 134 0 0 chr5 126665497 126665810 -72964340 + AluSq SINE Alu 1 313 0 1698 160 51 106 chr5 126665810 126666195 -72963955 - MSTB LTR MaLR -67 359 1 1024 330 63 9 chr5 126666195 126666268 -72963882 + LTR16A LTR ERVL 382 450 0 1970 287 79 15 chr5 126666269 126667326 -72962824 - L1ME LINE L1 -446 5724 4551 1678 154 3 46 chr5 126667326 126667611 -72962539 - AluJo SINE Alu -39 273 1 1970 287 79 15 chr5 126667611 126668006 -72962144 - L1ME LINE L1 -1619 4551 4183 1951 115 66 46 chr5 126668006 126668311 -72961839 - AluSx SINE Alu 0 312 2 234 0 0 0 chr5 126668367 126668393 -72961757 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2074 93 0 0 chr5 126668395 126668663 -72961487 + AluY SINE Alu 1 268 -43 294 122 0 0 chr5 126668663 126668704 -72961446 + AluY SINE Alu 219 259 -42 288 218 0 0 chr5 126668702 126668757 -72961393 + AluY SINE Alu 214 268 -33 * 366 155 0 0 chr5 126668740 126668798 -72961352 + AluY SINE Alu 202 259 -42 261 196 0 0 chr5 126668796 126668842 -72961308 + AluSp/q SINE Alu 215 260 -43 * 347 155 0 0 chr5 126668834 126668892 -72961258 + AluY SINE Alu 202 259 -42 243 139 0 0 chr5 126668892 126668928 -72961222 + Alu SINE Alu 216 251 -50 640 100 0 10 chr5 126668928 126669028 -72961122 + AluY SINE Alu 202 300 -11 340 394 14 7 chr5 126669034 126669176 -72960974 - L1 LINE L1 -2049 4097 3955 2104 90 0 0 chr5 126669196 126669464 -72960686 + AluY SINE Alu 1 268 -43 288 122 0 0 chr5 126669464 126669505 -72960645 + AluSp/q SINE Alu 220 260 -43 277 218 0 0 chr5 126669503 126669558 -72960592 + AluY SINE Alu 214 268 -33 * 355 155 0 0 chr5 126669541 126669599 -72960551 + AluY SINE Alu 202 259 -42 253 236 0 0 chr5 126669597 126669652 -72960498 + AluSg/x SINE Alu 215 269 -33 * 325 172 0 0 chr5 126669635 126669693 -72960457 + AluY SINE Alu 202 259 -42 238 139 0 0 chr5 126669693 126669729 -72960421 + Alu SINE Alu 216 251 -50 670 95 0 9 chr5 126669729 126669834 -72960316 + AluY SINE Alu 202 305 -6 1190 277 74 80 chr5 126669835 126670006 -72960144 - L1M4 LINE L1 -2042 4104 3934 2721 48 0 0 chr5 126670006 126670317 -72959833 + AluY SINE Alu 1 311 0 1190 277 74 80 chr5 126670317 126670342 -72959808 - L1M4 LINE L1 -2212 3934 3910 2440 81 10 0 chr5 126670342 126670640 -72959510 + AluSq SINE Alu 1 301 -12 1190 277 74 80 chr5 126670640 126670742 -72959408 - L1M4 LINE L1 -2236 3910 3809 2180 87 47 7 chr5 126670742 126671041 -72959109 - AluSp SINE Alu -2 311 1 1190 277 74 80 chr5 126671041 126671399 -72958751 - L1M4 LINE L1 -2337 3809 3451 2104 124 3 3 chr5 126671399 126671690 -72958460 - AluSq SINE Alu -22 291 1 1190 277 74 80 chr5 126671690 126671981 -72958169 - L1M4 LINE L1 -2695 3451 3159 2314 111 0 0 chr5 126671981 126672270 -72957880 + AluSg SINE Alu 6 294 -16 1190 277 74 80 chr5 126672270 126672487 -72957663 - L1M4 LINE L1 -2987 3159 2942 3098 186 7 4 chr5 126672490 126673037 -72957113 + MER44D DNA MER2_type 2 605 0 274 286 130 0 chr5 126673047 126673201 -72956949 - L1M4 LINE L1 -846 5300 5127 939 202 6 0 chr5 126673285 126673453 -72956697 + FRAM SINE Alu 1 166 -10 2120 121 0 7 chr5 126673462 126673744 -72956406 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr5 126673746 126673766 -72956384 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 1575 195 50 0 chr5 126673781 126674063 -72956087 - AluJb SINE Alu -16 296 1 699 135 0 0 chr5 126674167 126674271 -72955879 - MER66B LTR ERV1 0 486 383 2112 109 36 20 chr5 126674271 126674456 -72955694 - AluSc SINE Alu -1 308 115 183 42 0 0 chr5 126674456 126674480 -72955670 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2112 109 36 20 chr5 126674480 126674597 -72955553 - AluSc SINE Alu -194 115 1 952 118 0 29 chr5 126674597 126674733 -72955417 - AluSg SINE Alu -178 132 1 2237 193 2 7 chr5 126674751 126675165 -72954985 - MER66B LTR ERV1 -74 412 1 225 50 125 0 chr5 126675165 126675205 -72954945 + L1ME LINE L1 5616 5660 -461 1907 105 25 22 chr5 126675219 126675542 -72954608 + AluSx SINE Alu 7 330 0 2491 63 3 10 chr5 126675793 126676096 -72954054 - AluY SINE Alu -10 301 1 2540 78 0 0 chr5 126676133 126676439 -72953711 - AluSx SINE Alu -6 306 1 636 175 16 48 chr5 126676534 126676660 -72953490 + FLAM_C SINE Alu 1 122 -11 567 182 0 50 chr5 126676672 126676732 -72953418 - L1M4 LINE L1 -2391 3755 3702 1801 179 16 13 chr5 126676732 126677039 -72953111 - AluJb SINE Alu -4 308 1 567 182 0 50 chr5 126677039 126677099 -72953051 - L1M4 LINE L1 -2444 3702 3641 1777 123 31 49 chr5 126677109 126677458 -72952692 - L1MB5 LINE L1 -42 6132 5790 251 252 144 0 chr5 126677489 126677600 -72952550 + L1ME4a LINE L1 5879 6005 -116 927 144 62 0 chr5 126677600 126677746 -72952404 + AluSg/x SINE Alu 135 289 -23 2440 78 3 0 chr5 126677756 126678050 -72952100 + AluSp SINE Alu 1 295 -18 237 218 13 39 chr5 126678058 126678136 -72952014 + L1ME4a LINE L1 5997 6072 -49 2237 106 0 29 chr5 126678178 126678490 -72951660 + AluSq SINE Alu 1 303 -10 6821 205 54 21 chr5 126678491 126679674 -72950476 + L1MB8 LINE L1 3611 4753 -1393 2343 108 3 0 chr5 126679674 126679980 -72950170 - AluSq SINE Alu -6 307 1 6821 205 54 21 chr5 126679980 126680094 -72950056 + L1MB8 LINE L1 4753 4862 -1284 2254 123 0 0 chr5 126680094 126680394 -72949756 + AluSx SINE Alu 1 300 -12 6821 205 54 21 chr5 126680394 126680478 -72949672 + L1MB8 LINE L1 4862 4942 -1204 2232 111 57 20 chr5 126680478 126680829 -72949321 + THE1B LTR MaLR 1 364 0 6821 205 54 21 chr5 126680829 126680930 -72949220 + L1MB8 LINE L1 4942 5038 -1108 2015 153 7 7 chr5 126680930 126681231 -72948919 + AluJb SINE Alu 1 301 -11 6821 205 54 21 chr5 126681231 126681475 -72948675 + L1MB8 LINE L1 5038 5397 -749 884 128 0 15 chr5 126681476 126681609 -72948541 + FLAM_C SINE Alu 1 131 -12 3093 165 34 22 chr5 126681609 126682149 -72948001 + L1MB8 LINE L1 5376 5927 -251 2240 77 24 3 chr5 126682149 126682436 -72947714 + AluSp SINE Alu 1 293 -20 3093 165 34 22 chr5 126682436 126682537 -72947613 + L1MB8 LINE L1 5927 6025 -153 237 167 0 0 chr5 126682537 126682591 -72947559 + (TA)n Simple_repeat Simple_repeat 1 54 0 2189 129 3 0 chr5 126682591 126682885 -72947265 - AluSx SINE Alu -17 295 1 624 114 107 0 chr5 126682908 126683039 -72947111 + L1MB7 LINE L1 6040 6184 0 2934 27 0 0 chr5 126683045 126683383 -72946767 + L1PA3 LINE L1 5815 6152 -3 1084 156 28 11 chr5 126684078 126684257 -72945893 - AluSg/x SINE Alu -3 309 128 1914 149 17 10 chr5 126685054 126685343 -72944807 - AluJb SINE Alu -1 311 21 584 221 50 68 chr5 126686933 126687163 -72942987 - MIR SINE MIR -1 261 30 1627 159 0 36 chr5 126687819 126687926 -72942224 + AluJo SINE Alu 35 144 -168 2231 101 27 0 chr5 126687926 126688222 -72941928 + AluSx SINE Alu 1 304 -8 1627 159 0 36 chr5 126688222 126688391 -72941759 + AluJo SINE Alu 144 301 -11 189 74 0 0 chr5 126688570 126688597 -72941553 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 515 292 66 0 chr5 126689090 126689227 -72940923 - MIR SINE MIR -23 239 94 337 265 88 0 chr5 126690947 126691049 -72939101 - MIR SINE MIR -63 145 35 2164 135 13 0 chr5 126691253 126691557 -72938593 - AluJo SINE Alu 0 312 5 418 107 13 13 chr5 126692332 126692407 -72937743 + (TTTTC)n Simple_repeat Simple_repeat 4 78 0 339 85 0 0 chr5 126692402 126692449 -72937701 + (TCCC)n Simple_repeat Simple_repeat 2 48 0 * 2221 100 28 0 chr5 126692449 126692740 -72937410 - AluSx SINE Alu -13 299 1 788 173 15 8 chr5 126692749 126692882 -72937268 - AluJb SINE Alu -10 302 169 269 293 127 29 chr5 126693019 126693224 -72936926 + L3 LINE CR1 1263 1487 -90 724 291 111 9 chr5 126694540 126694890 -72935260 + L2 LINE L2 2367 2752 -562 2251 102 0 38 chr5 126695047 126695223 -72934927 - AluSx SINE Alu -11 301 141 1292 27 0 0 chr5 126695223 126695373 -72934777 - L1PA5 LINE L1 -4 6150 6001 2251 102 0 38 chr5 126695373 126695509 -72934641 - AluSx SINE Alu -171 141 1 270 136 0 0 chr5 126695706 126695750 -72934400 + (CAT)n Simple_repeat Simple_repeat 1 44 0 378 269 50 0 chr5 126695753 126695872 -72934278 - MIR SINE MIR -8 254 130 296 320 0 10 chr5 126696017 126696120 -72934030 - MIR SINE MIR 0 262 161 1553 176 52 35 chr5 126696139 126696429 -72933721 - AluJo SINE Alu -17 295 1 1000 121 14 0 chr5 126696458 126696598 -72933552 + AluSg/x SINE Alu 157 298 -14 4129 155 31 28 chr5 126697013 126697140 -72933010 - L1MB3 LINE L1 -2 6181 6056 2211 118 0 3 chr5 126697140 126697446 -72932704 - AluSx SINE Alu -7 305 1 4129 155 31 28 chr5 126697446 126698012 -72932138 - L1MB3 LINE L1 -127 6056 5483 2511 72 0 3 chr5 126698012 126698319 -72931831 - AluY SINE Alu -5 306 1 4129 155 31 28 chr5 126698319 126698436 -72931714 - L1MB3 LINE L1 -700 5483 5368 911 117 0 0 chr5 126698447 126698567 -72931583 + FLAM_C SINE Alu 9 128 -15 2932 220 13 26 chr5 126698580 126698740 -72931410 - L1MB3 LINE L1 -769 5377 5216 2118 113 25 0 chr5 126698740 126699024 -72931126 + AluSx SINE Alu 2 292 -20 2932 220 13 26 chr5 126699024 126699674 -72930476 - L1MB3 LINE L1 -930 5216 4590 2329 107 0 0 chr5 126699838 126700138 -72930012 - AluSg SINE Alu -10 300 1 1090 168 0 6 chr5 126701055 126701234 -72928916 - FRAM SINE Alu -1 175 1 443 129 0 0 chr5 126701450 126701512 -72928638 + FLAM SINE Alu 57 118 -25 399 344 110 35 chr5 126702073 126702470 -72927680 + L2 LINE L2 2542 3000 -272 2344 78 0 0 chr5 126702470 126702775 -72927375 - AluSx SINE Alu 0 305 1 399 344 110 35 chr5 126702775 126702892 -72927258 + L2 LINE L2 3000 3107 -165 198 295 18 98 chr5 126703239 126703351 -72926799 + MIR SINE MIR 23 125 -83 1654 199 3 3 chr5 126704962 126705254 -72924896 - AluJo SINE Alu -20 292 1 228 67 0 0 chr5 126707077 126707107 -72923043 + (CA)n Simple_repeat Simple_repeat 1 30 0 952 201 99 49 chr5 126707229 126707515 -72922635 + MLT1J LTR MaLR 1 336 -175 1894 223 134 6 chr5 126707515 126707986 -72922164 + MLT1F LTR MaLR 1 531 -11 198 0 0 0 chr5 126708073 126708095 -72922055 + (T)n Simple_repeat Simple_repeat 1 22 0 234 157 39 0 chr5 126708095 126708146 -72922004 + MLT1J LTR MaLR 430 482 -29 468 281 38 43 chr5 126709119 126709321 -72920829 - MLT1J2 LTR MaLR 0 450 246 854 198 62 125 chr5 126709321 126709527 -72920623 - MLT1A1 LTR MaLR 0 365 147 2398 110 0 0 chr5 126709527 126709836 -72920314 + AluSc SINE Alu 1 309 0 854 198 62 125 chr5 126709836 126709895 -72920255 - MLT1A1 LTR MaLR -218 147 86 2212 133 0 16 chr5 126709895 126710212 -72919938 - AluSx SINE Alu 0 312 1 854 198 62 125 chr5 126710212 126710367 -72919783 - MLT1A1 LTR MaLR -279 86 1 230 242 97 48 chr5 126710372 126710496 -72919654 - MLT1J2 LTR MaLR -220 230 101 487 332 155 26 chr5 126710722 126711264 -72918886 + L2 LINE L2 2245 2856 -458 2254 105 9 19 chr5 126711282 126711597 -72918553 + AluSx SINE Alu 1 312 0 582 174 116 87 chr5 126712196 126712472 -72917678 + LTR37A LTR ERV1 56 339 -87 424 92 0 0 chr5 126712484 126712549 -72917601 - Alu SINE Alu -3 309 245 2326 100 3 25 chr5 126712602 126712921 -72917229 - AluSx SINE Alu 0 312 1 22 0 0 0 chr5 126712947 126712969 -72917181 + AT_rich Low_complexity Low_complexity 1 22 0 926 203 14 14 chr5 126715354 126715561 -72914589 - LTR29 LTR ERV1 -256 366 160 206 118 0 0 chr5 126715564 126715598 -72914552 + (T)n Simple_repeat Simple_repeat 1 34 0 1714 104 0 26 chr5 126715615 126715709 -72914441 - AluSq SINE Alu -88 225 130 2347 86 6 19 chr5 126715709 126716024 -72914126 - AluY SINE Alu 0 311 1 1714 104 0 26 chr5 126716024 126716160 -72913990 - AluSq SINE Alu -183 130 1 938 160 56 131 chr5 126716161 126716252 -72913898 - MER39 LTR ERV1 -96 611 515 1544 154 0 24 chr5 126716252 126716525 -72913625 - AluSx SINE Alu 0 314 48 938 160 56 131 chr5 126716525 126716593 -72913557 - MER39 LTR ERV1 -192 515 444 1860 146 17 0 chr5 126716593 126716881 -72913269 + AluJo SINE Alu 1 293 -19 938 160 56 131 chr5 126716881 126717055 -72913095 - MER39 LTR ERV1 -263 444 300 182 104 0 62 chr5 126717060 126717108 -72913042 + (T)n Simple_repeat Simple_repeat 1 45 0 270 278 41 0 chr5 126717703 126717800 -72912350 - LTR48B LTR ERV1 -543 101 1 239 297 77 22 chr5 126717800 126718073 -72912077 + L1M3 LINE L1 3658 3945 -2201 1085 182 6 0 chr5 126718099 126718275 -72911875 - FRAM SINE Alu -1 175 1 659 158 18 23 chr5 126718357 126718578 -72911572 + GA-rich Low_complexity Low_complexity 1 221 -304 2369 77 37 0 chr5 126718578 126718876 -72911274 + AluY SINE Alu 1 309 -2 1305 166 29 73 chr5 126718894 126719010 -72911140 + AluJo SINE Alu 10 130 -182 2948 51 11 0 chr5 126719010 126719361 -72910789 + THE1A LTR MaLR 1 355 0 1305 166 29 73 chr5 126719361 126719376 -72910774 + AluJo SINE Alu 130 144 -168 2033 115 14 0 chr5 126719376 126719662 -72910488 - AluSc SINE Alu -19 290 1 1305 166 29 73 chr5 126719662 126719843 -72910307 + AluJo SINE Alu 144 309 -3 1210 219 83 6 chr5 126719843 126720268 -72909882 + MLT1F1 LTR MaLR 54 542 0 313 257 0 0 chr5 126720269 126720339 -72909811 + L1MEc LINE L1 1634 1703 -4693 614 229 114 23 chr5 126720372 126720430 -72909720 - AluJo SINE Alu -120 192 141 2081 115 7 7 chr5 126720430 126720600 -72909550 - AluSx SINE Alu -7 305 133 2069 114 0 3 chr5 126720600 126720899 -72909251 - AluSx SINE Alu -4 308 11 2081 115 7 7 chr5 126720899 126721033 -72909117 - AluSx SINE Alu -178 134 1 614 229 114 23 chr5 126721033 126721149 -72909001 - AluJo SINE Alu -171 141 2 1179 204 50 4 chr5 126721297 126721557 -72908593 + L1M3 LINE L1 4487 4758 -1388 450 243 89 0 chr5 126721557 126721695 -72908455 + MER58 DNA MER1_type 4 2365 -55 1816 142 0 30 chr5 126721747 126722043 -72908107 + AluSx SINE Alu 7 293 -19 2038 99 0 3 chr5 126722045 126722352 -72907798 + AluSq SINE Alu 1 306 0 1001 165 16 11 chr5 126722357 126722539 -72907611 + L1M3 LINE L1 4765 4947 -1199 1475 246 30 25 chr5 126722539 126722933 -72907217 + LTR40a LTR ERVL 120 515 -4 1580 128 4 0 chr5 126722938 126723172 -72906978 - AluJo SINE Alu -76 236 2 242 83 0 42 chr5 126723182 126723230 -72906920 + L1MC1 LINE L1 6285 6330 -3 2187 88 0 58 chr5 126723361 126723690 -72906460 - AluY SINE Alu -1 310 1 1425 183 33 31 chr5 126723701 126724035 -72906115 + L1M3 LINE L1 5266 5605 -575 2065 109 0 3 chr5 126724036 126724329 -72905821 + AluSx SINE Alu 1 292 -20 1088 174 5 10 chr5 126724415 126724622 -72905528 - AluJo SINE Alu -10 302 97 2084 99 10 7 chr5 126724636 126724928 -72905222 - AluSx SINE Alu -19 293 1 1669 184 3 3 chr5 126725004 126725303 -72904847 + AluJb SINE Alu 1 299 -13 2256 78 3 0 chr5 126725621 126725914 -72904236 - AluY SINE Alu -17 294 1 617 96 64 48 chr5 126726503 126726579 -72903571 - LTR49 LTR ERV1 -10 585 505 2051 125 3 0 chr5 126726579 126726883 -72903267 + AluSq SINE Alu 1 305 -8 617 96 64 48 chr5 126726883 126726931 -72903219 - LTR49 LTR ERV1 -90 505 459 1233 216 119 37 chr5 126726941 126727343 -72902807 - LTR48B LTR ERV1 -209 435 1 809 136 0 0 chr5 126727483 126727601 -72902549 + AluJb SINE Alu 1 118 -194 275 322 114 30 chr5 126727663 126728144 -72902006 + L2 LINE L2 2694 3273 -40 221 203 62 16 chr5 126729028 126729092 -72901058 + MIR SINE MIR 89 155 -107 276 250 125 23 chr5 126729259 126729347 -72900803 - MIR SINE MIR -115 147 51 23 0 0 0 chr5 126729903 126729926 -72900224 + AT_rich Low_complexity Low_complexity 1 23 0 2055 76 40 0 chr5 126730058 126730333 -72899817 + AluSx SINE Alu 1 286 -26 2169 62 0 46 chr5 126731763 126732091 -72898059 - AluY SINE Alu 0 311 3 1865 145 17 0 chr5 126732330 126732627 -72897523 - AluSx SINE Alu -10 302 1 1989 111 24 3 chr5 126732691 126732988 -72897162 - AluSq SINE Alu -9 304 2 432 0 0 0 chr5 126733182 126733230 -72896920 + (TG)n Simple_repeat Simple_repeat 2 49 0 1251 163 124 4 chr5 126733607 126733865 -72896285 - AluJb SINE Alu -21 291 3 2335 97 0 0 chr5 126734772 126735080 -72895070 + AluSg SINE Alu 1 308 -2 2492 43 0 0 chr5 126735082 126735383 -72894767 + AluY SINE Alu 1 301 -10 1887 146 13 3 chr5 126735401 126735702 -72894448 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr5 126735837 126735858 -72894292 + AT_rich Low_complexity Low_complexity 1 21 0 1735 150 3 23 chr5 126735859 126736159 -72893991 + AluJb SINE Alu 1 294 -18 2146 101 0 3 chr5 126736562 126736858 -72893292 + AluSg SINE Alu 1 295 -15 535 193 0 35 chr5 126737835 126737949 -72892201 - FRAM SINE Alu -2 174 65 424 122 0 0 chr5 126737960 126738034 -72892116 - AluS SINE Alu -4 305 232 2077 123 0 19 chr5 126738083 126738399 -72891751 + AluSq SINE Alu 1 310 -3 218 220 68 17 chr5 126739035 126739094 -72891056 - L2 LINE L2 -39 3233 3172 1970 120 0 0 chr5 126739095 126739369 -72890781 + AluSg SINE Alu 1 274 -36 21 0 0 0 chr5 126739374 126739395 -72890755 + AT_rich Low_complexity Low_complexity 1 21 0 2477 68 3 0 chr5 126739397 126739708 -72890442 + AluSp SINE Alu 1 312 -1 772 199 64 13 chr5 126739902 126740058 -72890092 - FRAM SINE Alu -2 164 1 2171 94 0 16 chr5 126740424 126740731 -72889419 - AluSc SINE Alu -7 302 1 259 77 0 0 chr5 126741315 126741354 -72888796 + L1MC4 LINE L1 6665 6703 -1339 872 203 0 28 chr5 126741417 126741594 -72888556 - FAM SINE Alu 0 49 1 1388 154 49 31 chr5 126741860 126742146 -72888004 + AluJb SINE Alu 1 291 -21 260 266 150 0 chr5 126742633 126742746 -72887404 + MIR SINE MIR 113 242 -20 2025 107 0 10 chr5 126743262 126743561 -72886589 - AluSq SINE Alu -13 300 5 1343 184 26 11 chr5 126743779 126744051 -72886099 + AluJo SINE Alu 1 276 -36 2147 74 7 0 chr5 126745032 126745317 -72884833 - AluSx SINE Alu -25 287 1 2171 94 0 16 chr5 126748641 126748948 -72881202 - AluSc SINE Alu -7 302 1 259 77 0 0 chr5 126749532 126749571 -72880579 + L1MC4 LINE L1 6665 6703 -1339 872 203 0 28 chr5 126749634 126749811 -72880339 - FAM SINE Alu 0 49 1 1388 154 49 31 chr5 126750077 126750363 -72879787 + AluJb SINE Alu 1 291 -21 260 266 150 0 chr5 126750850 126750963 -72879187 + MIR SINE MIR 113 242 -20 2025 107 0 10 chr5 126751479 126751778 -72878372 - AluSq SINE Alu -13 300 5 1343 184 26 11 chr5 126751996 126752268 -72877882 + AluJo SINE Alu 1 276 -36 2147 74 7 0 chr5 126753249 126753534 -72876616 - AluSx SINE Alu -25 287 1 1692 163 14 7 chr5 126755137 126755432 -72874718 + AluJb SINE Alu 1 297 -15 458 251 180 16 chr5 126755551 126755667 -72874483 + MIR SINE MIR 23 119 -143 2191 82 0 7 chr5 126755667 126755958 -72874192 - AluSq SINE Alu -15 298 10 458 251 180 16 chr5 126755958 126756024 -72874126 + MIR SINE MIR 119 235 -27 1555 186 3 14 chr5 126756726 126757022 -72873128 - AluJb SINE Alu -19 293 1 850 150 0 15 chr5 126758723 126758856 -72871294 + AluJo/FLAM SINE Alu 2 132 -170 2240 87 10 3 chr5 126758856 126759167 -72870983 + AluSp SINE Alu 1 313 0 2001 129 10 0 chr5 126759455 126759758 -72870392 + AluY SINE Alu 1 306 -5 186 231 0 0 chr5 126760185 126760224 -72869926 + MIR SINE MIR 50 88 -120 1124 202 142 60 chr5 126760547 126760600 -72869550 + MSTD LTR MaLR 1 48 -348 1942 127 9 19 chr5 126760600 126760915 -72869235 + AluSx SINE Alu 1 312 0 1124 202 142 60 chr5 126760915 126761227 -72868923 + MSTD LTR MaLR 48 396 0 369 262 91 87 chr5 126761316 126761444 -72868706 + L1ME4a LINE L1 5593 5719 -402 2249 108 0 0 chr5 126761444 126761750 -72868400 + AluSg SINE Alu 1 306 -4 369 262 91 87 chr5 126761750 126762046 -72868104 + L1ME4a LINE L1 5719 6012 -109 2265 94 0 7 chr5 126762046 126762354 -72867796 - AluSq SINE Alu -7 306 1 2176 101 0 3 chr5 126762355 126762653 -72867497 - AluSx SINE Alu -11 301 5 369 262 91 87 chr5 126762653 126762669 -72867481 + L1ME4a LINE L1 6012 6026 -95 2227 100 0 3 chr5 126762669 126762970 -72867180 - AluSg SINE Alu -10 300 1 369 262 91 87 chr5 126762970 126763052 -72867098 + L1ME4a LINE L1 6026 6121 0 269 324 148 14 chr5 126763289 126763505 -72866645 + L2 LINE L2 2113 2357 -957 1537 193 85 55 chr5 126763547 126764018 -72866132 + L1MB8 LINE L1 5694 6178 0 1964 87 80 0 chr5 126764942 126765228 -72864922 + AluSx SINE Alu 1 309 -3 834 201 0 6 chr5 126765228 126765387 -72864763 + AluSc SINE Alu 135 292 -17 265 223 152 33 chr5 126765401 126765527 -72864623 + L1ME LINE L1 5691 5847 -274 2222 97 0 0 chr5 126765527 126765817 -72864333 - AluSc SINE Alu -19 290 1 265 223 152 33 chr5 126765817 126765874 -72864276 + L1ME LINE L1 5847 5896 -225 1844 160 0 3 chr5 126765911 126766204 -72863946 - AluJb SINE Alu -13 299 8 1753 167 0 3 chr5 126766244 126766531 -72863619 - AluJo SINE Alu -26 286 1 592 195 124 0 chr5 126766621 126766734 -72863416 - FLAM_A SINE Alu -6 127 1 2010 136 0 0 chr5 126766746 126767040 -72863110 - AluSx SINE Alu -18 294 1 1307 208 0 51 chr5 126767142 126767454 -72862696 + AluJo SINE Alu 13 308 -4 2384 39 0 0 chr5 126767465 126767746 -72862404 + AluY SINE Alu 30 310 -1 284 296 89 7 chr5 126768141 126768276 -72861874 + L1ME LINE L1 5476 5621 -500 537 204 0 0 chr5 126768363 126768456 -72861694 + AluSg/x SINE Alu 205 297 -15 2025 125 17 0 chr5 126768491 126768780 -72861370 + AluSq SINE Alu 1 294 -19 22 0 0 0 chr5 126768810 126768832 -72861318 + AT_rich Low_complexity Low_complexity 1 22 0 2303 174 46 50 chr5 126768838 126769029 -72861121 - Charlie1a DNA MER1_type -1543 1218 1028 2243 120 7 0 chr5 126769029 126769337 -72860813 - AluSx SINE Alu -1 311 2 2303 174 46 50 chr5 126769337 126769685 -72860465 - Charlie1a DNA MER1_type -1733 1028 681 1247 118 0 0 chr5 126769755 126769924 -72860226 - AluSg/x SINE Alu -12 298 130 1651 191 117 93 chr5 126769927 126770150 -72860000 - Charlie1a DNA MER1_type -2199 562 346 1928 113 62 7 chr5 126770150 126770442 -72859708 + AluSx SINE Alu 1 308 -4 1651 191 117 93 chr5 126770442 126770524 -72859626 - Charlie1a DNA MER1_type -2415 346 267 1350 147 117 26 chr5 126770524 126770790 -72859360 - AluJb SINE Alu -22 290 1 1651 191 117 93 chr5 126770790 126771032 -72859118 - Charlie1a DNA MER1_type -2494 267 1 314 270 162 7 chr5 126771213 126771361 -72858789 - L1MC/D LINE L1 -1966 5842 5672 396 59 0 0 chr5 126772326 126772377 -72857773 + (TA)n Simple_repeat Simple_repeat 2 52 0 2251 96 40 3 chr5 126772377 126772678 -72857472 - AluSq SINE Alu -1 312 1 1852 31 9 18 chr5 126772902 126773131 -72857019 - AluY SINE Alu -2 309 83 1316 159 5 23 chr5 126773763 126773983 -72856167 - AluJo SINE Alu -12 300 85 365 154 39 26 chr5 126774023 126774101 -72856049 - AluJo SINE Alu -194 108 30 5636 36 0 14 chr5 126774606 126775252 -72854898 + L1PA5 LINE L1 5518 6154 0 22 56 0 0 chr5 126777173 126777209 -72852941 + GC_rich Low_complexity Low_complexity 1 36 0 288 0 0 0 chr5 126777222 126777254 -72852896 + (CCG)n Simple_repeat Simple_repeat 1 32 0 1207 145 226 0 chr5 126778886 126779121 -72851029 + AluJo SINE Alu 1 288 -24 226 308 103 37 chr5 126779606 126779686 -72850464 + L2 LINE L2 3126 3216 -56 1708 148 65 0 chr5 126779686 126779964 -72850186 - AluJb SINE Alu -16 296 1 226 308 103 37 chr5 126779964 126779990 -72850160 + L2 LINE L2 3216 3239 -33 2523 56 0 3 chr5 126780081 126780386 -72849764 - AluY SINE Alu -4 307 4 314 254 46 92 chr5 126780472 126780645 -72849505 - MER5B DNA MER1_type -11 167 3 2348 69 10 7 chr5 126781052 126781356 -72848794 + AluSx SINE Alu 1 305 -7 332 361 100 32 chr5 126782619 126782899 -72847251 - L2 LINE L2 -32 3240 2942 2184 97 0 36 chr5 126783305 126783448 -72846702 + AluSx SINE Alu 1 148 -164 2362 66 20 3 chr5 126783448 126783751 -72846399 + AluY SINE Alu 1 308 -3 2184 97 0 36 chr5 126783751 126783916 -72846234 + AluSx SINE Alu 148 298 -14 2135 118 0 3 chr5 126783916 126784205 -72845945 + AluSx SINE Alu 5 292 -20 24 32 0 0 chr5 126784530 126784561 -72845589 + AT_rich Low_complexity Low_complexity 1 31 0 856 212 0 11 chr5 126784737 126784921 -72845229 - FRAM SINE Alu 0 176 1 2343 89 3 3 chr5 126784965 126785267 -72844883 + AluSx SINE Alu 2 303 -9 1131 112 0 0 chr5 126785267 126785428 -72844722 + AluSg/x SINE Alu 137 297 -15 2072 126 10 13 chr5 126785767 126786077 -72844073 - AluSx SINE Alu -2 310 2 2202 100 7 0 chr5 126786197 126786486 -72843664 - AluSp SINE Alu -22 291 1 2079 126 0 0 chr5 126786818 126787103 -72843047 - AluSq SINE Alu -28 285 1 826 176 8 0 chr5 126787340 126787471 -72842679 + FLAM_C SINE Alu 2 133 0 21 0 0 0 chr5 126787901 126787922 -72842228 + AT_rich Low_complexity Low_complexity 1 21 0 1966 153 3 0 chr5 126788220 126788520 -72841630 + AluSx SINE Alu 1 301 -11 1484 141 40 77 chr5 126789421 126789719 -72840431 - AluSq SINE Alu -25 288 2 255 274 14 0 chr5 126789732 126789805 -72840345 + MIR SINE MIR 180 253 -9 1500 188 18 32 chr5 126789811 126790093 -72840057 + AluJo SINE Alu 1 278 -34 260 51 0 26 chr5 126790093 126790132 -72840018 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 261 83 0 0 chr5 126790173 126790209 -72839941 + (GAAAA)n Simple_repeat Simple_repeat 4 39 0 1180 153 0 0 chr5 126790616 126790792 -72839358 - FRAM SINE Alu 0 176 1 234 345 25 56 chr5 126790884 126791081 -72839069 - L2 LINE L2 -671 2643 2453 1237 101 0 6 chr5 126791084 126791252 -72838898 - AluSg/x SINE Alu -21 291 125 306 0 0 0 chr5 126791252 126791286 -72838864 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2150 91 18 0 chr5 126791286 126791561 -72838589 - AluSg SINE Alu -30 280 1 2003 129 3 32 chr5 126791912 126792222 -72837928 - AluSx SINE Alu -1 311 11 189 223 136 117 chr5 126792266 126792292 -72837858 - MIR3 SINE MIR -102 106 82 3769 142 10 0 chr5 126792292 126792813 -72837337 + MER1A DNA MER1_type 2 527 0 189 223 136 117 chr5 126792813 126792889 -72837261 - MIR3 SINE MIR -126 82 2 345 362 69 32 chr5 126793222 126793468 -72836682 + L2 LINE L2 2933 3187 -85 1631 151 95 18 chr5 126793468 126793752 -72836398 - AluSx SINE Alu -6 306 1 2471 68 0 0 chr5 126793766 126794058 -72836092 - AluSc SINE Alu -17 292 1 360 200 13 13 chr5 126794088 126794163 -72835987 + L2 LINE L2 3223 3297 -16 463 320 188 23 chr5 126794406 126794715 -72835435 - L2 LINE L2 -4 3268 2909 489 309 189 47 chr5 126794745 126794867 -72835283 - L2 LINE L2 -468 2846 2743 2450 63 0 26 chr5 126794867 126795170 -72834980 + AluSc SINE Alu 1 295 -14 489 309 189 47 chr5 126795170 126795624 -72834526 - L2 LINE L2 -571 2743 2188 1863 159 31 3 chr5 126795624 126795975 -72834175 + L1MA8 LINE L1 4971 5331 -815 844 170 0 15 chr5 126795975 126796110 -72834040 + FLAM_C SINE Alu 1 133 0 2281 114 0 0 chr5 126796124 126796422 -72833728 + AluSx SINE Alu 2 299 -13 3189 108 68 6 chr5 126796422 126796940 -72833210 + L1MA8 LINE L1 5736 6285 -6 1336 142 15 160 chr5 126796964 126797301 -72832849 + AluJo SINE Alu 1 288 -24 282 233 68 0 chr5 126797324 126797397 -72832753 - L2 LINE L2 -1235 2079 2002 323 336 136 12 chr5 126797499 126797829 -72832321 - L2 LINE L2 -1235 2079 1709 944 143 0 0 chr5 126797846 126798026 -72832124 - FLAM_C SINE Alu 0 180 1 2228 127 0 0 chr5 126798518 126798818 -72831332 - AluSx SINE Alu -12 300 1 602 117 0 0 chr5 126799261 126799338 -72830812 + AluSc SINE Alu 126 202 -107 949 246 12 32 chr5 126799501 126799749 -72830401 - MIR SINE MIR 0 262 20 531 183 0 0 chr5 126799795 126799888 -72830262 + MIR SINE MIR 110 202 -60 279 259 9 69 chr5 126800354 126800470 -72829680 - L1ME3A LINE L1 -100 6070 5962 809 128 15 45 chr5 126800484 126800617 -72829533 - FLAM_C SINE Alu -13 130 2 1640 170 91 20 chr5 126800669 126801010 -72829140 - L1MB8 LINE L1 -3 6569 6205 816 139 82 0 chr5 126801013 126801135 -72829015 - AluSp SINE Alu -180 133 2 2019 180 11 8 chr5 126801135 126801508 -72828642 - L1MB8 LINE L1 -352 6226 5853 672 130 15 53 chr5 126801517 126801648 -72828502 - L1MD3 LINE L1 0 7995 7870 710 180 92 76 chr5 126801651 126801901 -72828249 - L1MC5 LINE L1 -798 7163 6910 2355 78 3 0 chr5 126801928 126802223 -72827927 + AluSp SINE Alu 1 296 -17 2860 162 169 17 chr5 126802224 126802823 -72827327 - MER39 LTR ERV1 -17 690 1 2152 94 6 9 chr5 126802862 126803260 -72826890 + LTR7 LTR ERV1 1 448 -2 444 189 8 76 chr5 126803273 126803405 -72826745 - L1MC5 LINE L1 -1086 6875 6753 677 210 79 28 chr5 126803422 126803636 -72826514 - L1MB8 LINE L1 -6 6172 5948 2291 88 3 13 chr5 126803636 126803942 -72826208 - AluSg SINE Alu -7 303 1 831 176 15 0 chr5 126803945 126804076 -72826074 - AluJo SINE Alu -173 139 7 11197 202 41 45 chr5 126804080 126804728 -72825422 - L1MB8 LINE L1 -697 5881 5232 5622 79 3 14 chr5 126804728 126805427 -72824723 - LTR8 LTR ERV1 0 691 1 11197 202 41 45 chr5 126805427 126805498 -72824652 - L1MB8 LINE L1 -1346 5232 5162 1826 178 7 0 chr5 126805498 126805801 -72824349 - AluJb SINE Alu -7 305 1 11197 202 41 45 chr5 126805801 126806094 -72824056 - L1MB8 LINE L1 -1416 5162 4869 2618 61 0 6 chr5 126806094 126806407 -72823743 - AluY SINE Alu 0 311 1 11197 202 41 45 chr5 126806407 126806594 -72823556 - L1MB8 LINE L1 -1709 4869 4683 3436 160 17 57 chr5 126806594 126807231 -72822919 - LTR9 LTR ERV1 0 612 1 11197 202 41 45 chr5 126807231 126808547 -72821603 - L1MB8 LINE L1 -1895 4683 3363 1761 181 0 13 chr5 126808547 126808856 -72821294 - AluJb SINE Alu -7 305 1 11197 202 41 45 chr5 126808856 126809536 -72820614 - L1MB8 LINE L1 -3215 3363 2682 2002 133 3 29 chr5 126809536 126809852 -72820298 - AluSx SINE Alu -4 308 1 11197 202 41 45 chr5 126809852 126810024 -72820126 - L1MB8 LINE L1 -3896 2682 2511 1933 140 0 20 chr5 126810024 126810316 -72819834 - AluSx SINE Alu -26 286 1 11197 202 41 45 chr5 126810316 126810515 -72819635 - L1MB8 LINE L1 -4067 2511 2198 285 47 0 70 chr5 126810669 126810712 -72819438 - HERVL LTR ERVL -3393 2261 2222 2085 76 7 0 chr5 126810724 126810999 -72819151 + HSMAR2 DNA Mariner 2 278 -1024 22 0 0 0 chr5 126811011 126811033 -72819117 + AT_rich Low_complexity Low_complexity 1 22 0 673 184 0 0 chr5 126811038 126811141 -72819009 - FLAM_C SINE Alu -23 120 18 598 124 0 11 chr5 126811141 126811230 -72818920 + HSMAR2 DNA Mariner 264 351 -951 37736 90 11 16 chr5 126811238 126817415 -72812735 + L1PA6 LINE L1 11 6153 -1 5596 108 19 41 chr5 126817427 126817987 -72812163 + HSMAR2 DNA Mariner 333 869 -433 1983 165 0 0 chr5 126817987 126818290 -72811860 - AluJb SINE Alu -9 303 1 5596 108 19 41 chr5 126818290 126818583 -72811567 + HSMAR2 DNA Mariner 869 1167 -135 21 0 0 0 chr5 126818782 126818803 -72811347 + AT_rich Low_complexity Low_complexity 1 21 0 2329 75 3 0 chr5 126818803 126819096 -72811054 - AluY SINE Alu -17 294 1 1359 163 151 0 chr5 126819105 126819356 -72810794 - AluJb SINE Alu -13 289 1 558 297 55 6 chr5 126819578 126819743 -72810407 - MIR3 SINE MIR -28 180 8 2094 93 3 51 chr5 126820337 126820649 -72809501 - AluSx SINE Alu -13 299 3 43 0 0 0 chr5 126821051 126821094 -72809056 + AT_rich Low_complexity Low_complexity 1 43 0 2359 93 3 0 chr5 126821094 126821404 -72808746 - AluSp SINE Alu -2 311 1 1437 201 66 3 chr5 126821404 126821692 -72808458 - AluJb SINE Alu -1 311 6 24 0 0 0 chr5 126821700 126821724 -72808426 + AT_rich Low_complexity Low_complexity 1 24 0 640 241 7 7 chr5 126821726 126821863 -72808287 - FRAM SINE Alu -38 138 2 24 0 0 29 chr5 126821865 126821888 -72808262 + AT_rich Low_complexity Low_complexity 1 24 -10 1968 114 0 59 chr5 126821888 126822194 -72807956 + AluJb SINE Alu 1 288 -24 24 0 0 29 chr5 126822194 126822205 -72807945 + AT_rich Low_complexity Low_complexity 24 34 0 632 125 0 0 chr5 126822337 126822425 -72807725 - FLAM_A SINE Alu -27 115 28 1627 178 13 20 chr5 126822524 126822822 -72807328 + AluJo SINE Alu 1 296 -16 316 331 101 0 chr5 126822959 126823107 -72807043 - L1M4 LINE L1 -1259 4887 4725 2377 214 19 36 chr5 126823150 126823262 -72806888 - L1ME1 LINE L1 -6 6160 6048 201 39 0 0 chr5 126823262 126823288 -72806862 + (CA)n Simple_repeat Simple_repeat 2 27 0 2377 214 19 36 chr5 126823288 126823807 -72806343 - L1ME1 LINE L1 -118 6048 5540 1938 105 7 43 chr5 126823975 126824302 -72805848 - AluSp SINE Alu 0 313 1 516 164 0 62 chr5 126824388 126824516 -72805634 - L1MB1 LINE L1 0 6168 6049 740 242 102 0 chr5 126824587 126824773 -72805377 + MIR SINE MIR 48 252 -10 1030 161 0 0 chr5 126824775 126824930 -72805220 + FRAM SINE Alu 1 153 -23 687 172 33 8 chr5 126824938 126825060 -72805090 + FLAM_C SINE Alu 1 125 -18 186 188 188 43 chr5 126825966 126826035 -72804115 - L2 LINE L2 -4 3309 3231 1920 145 0 10 chr5 126826066 126826363 -72803787 + AluJo SINE Alu 5 298 -14 1699 178 11 0 chr5 126826512 126826782 -72803368 - AluJo SINE Alu -39 273 1 4207 256 67 38 chr5 126826782 126828950 -72801200 - L1M4c LINE L1 -4596 2363 121 534 103 0 0 chr5 126828973 126829051 -72801099 + (TA)n Simple_repeat Simple_repeat 1 78 0 953 71 0 0 chr5 126829089 126829202 -72800948 + AluSp/q SINE Alu 182 294 -19 2087 69 10 41 chr5 126829781 126830100 -72800050 + AluY SINE Alu 6 315 0 598 259 38 5 chr5 126830138 126830350 -72799800 + L1ME LINE L1 5395 5613 -557 947 200 11 0 chr5 126830654 126830834 -72799316 - AluJb SINE Alu -14 298 117 5653 166 44 14 chr5 126830840 126832507 -72797643 - L1MC2 LINE L1 -17 6327 4605 550 147 8 31 chr5 126832507 126832636 -72797514 - L1MA8 LINE L1 -10 6281 6156 5653 166 44 14 chr5 126832636 126832780 -72797370 - L1MC2 LINE L1 -1739 4605 4467 997 267 22 52 chr5 126832778 126832852 -72797298 - L1MC4a LINE L1 -1922 5886 5811 * 2316 95 10 0 chr5 126832852 126833147 -72797003 - AluSp SINE Alu -15 298 1 997 267 22 52 chr5 126833147 126833477 -72796673 - L1MC4a LINE L1 -1997 5811 5494 2221 92 24 3 chr5 126833535 126833828 -72796322 + AluSg SINE Alu 1 299 -11 21 36 0 0 chr5 126833875 126833903 -72796247 + AT_rich Low_complexity Low_complexity 1 28 0 2212 118 0 10 chr5 126834537 126834841 -72795309 + AluSx SINE Alu 1 301 -11 2206 108 0 7 chr5 126835053 126835348 -72794802 - AluSx SINE Alu -19 293 1 244 305 19 29 chr5 126835358 126835463 -72794687 + L2 LINE L2 3176 3279 -34 2032 139 7 3 chr5 126835783 126836078 -72794072 + AluSx SINE Alu 1 296 -16 2250 82 0 17 chr5 126836080 126836372 -72793778 + AluY SINE Alu 1 287 -24 181 0 33 33 chr5 126836376 126836406 -72793744 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1864 166 3 0 chr5 126836439 126836729 -72793421 + AluJb SINE Alu 1 291 -21 2088 111 14 7 chr5 126837187 126837484 -72792666 + AluSp SINE Alu 1 299 -14 2149 131 7 0 chr5 126839516 126839821 -72790329 + AluSx SINE Alu 1 307 -5 2032 145 0 6 chr5 126840048 126840359 -72789791 - AluJo SINE Alu -3 309 1 333 220 40 20 chr5 126840795 126840895 -72789255 + L1ME LINE L1 5703 5804 -317 1434 190 29 21 chr5 126841158 126841464 -72788686 + AluJo SINE Alu 1 308 0 1538 207 0 0 chr5 126841464 126841715 -72788435 + AluJo SINE Alu 1 251 -61 180 0 0 0 chr5 126841717 126841737 -72788413 + (TAA)n Simple_repeat Simple_repeat 2 21 0 198 0 0 0 chr5 126841737 126841759 -72788391 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1789 148 18 4 chr5 126842356 126842634 -72787516 + AluJo SINE Alu 14 295 -17 21 36 0 0 chr5 126842634 126842662 -72787488 + AT_rich Low_complexity Low_complexity 1 28 0 1932 125 3 24 chr5 126842699 126843011 -72787139 - AluSx SINE Alu 0 306 1 2139 96 53 0 chr5 126843196 126843477 -72786673 + AluSx SINE Alu 1 296 -16 234 0 0 0 chr5 126843648 126843674 -72786476 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 2185 80 0 21 chr5 126844647 126844973 -72785177 - AluY SINE Alu 0 320 1 28 102 0 0 chr5 126844982 126845080 -72785070 + AT_rich Low_complexity Low_complexity 1 98 0 1778 95 8 4 chr5 126845334 126845575 -72784575 + AluSg SINE Alu 39 280 -30 2096 126 0 3 chr5 126846234 126846520 -72783630 + AluSx SINE Alu 1 285 -27 495 0 0 0 chr5 126846520 126846575 -72783575 + (CA)n Simple_repeat Simple_repeat 2 56 0 2507 77 3 0 chr5 126846585 126846895 -72783255 + AluSp SINE Alu 1 311 -2 33 43 0 0 chr5 126846987 126847034 -72783116 + AT_rich Low_complexity Low_complexity 1 47 0 1235 115 50 107 chr5 126847063 126847215 -72782935 + LTR51 LTR ERV1 1 133 -538 2254 104 3 3 chr5 126847215 126847524 -72782626 + AluSx SINE Alu 2 310 -2 1235 115 50 107 chr5 126847524 126847632 -72782518 + LTR51 LTR ERV1 133 246 -425 408 40 0 0 chr5 126847636 126847686 -72782464 + (TG)n Simple_repeat Simple_repeat 2 51 0 708 179 0 0 chr5 126847686 126847798 -72782352 - FLAM_C SINE Alu -26 117 6 2334 163 5 14 chr5 126847804 126848222 -72781928 + LTR51 LTR ERV1 258 671 0 2369 89 0 3 chr5 126848272 126848574 -72781576 + AluY SINE Alu 1 301 -10 6036 205 45 75 chr5 126849061 126849152 -72780998 - L1M4 LINE L1 -1514 4632 4540 2125 134 3 10 chr5 126849152 126849465 -72780685 + AluSx SINE Alu 1 311 -1 6036 205 45 75 chr5 126849465 126850337 -72779813 - L1M4 LINE L1 -1606 4540 3644 1567 199 20 17 chr5 126850337 126850639 -72779511 - AluJo SINE Alu -9 303 1 6036 205 45 75 chr5 126850639 126850655 -72779495 - L1M4 LINE L1 -2502 3644 3629 1653 173 0 15 chr5 126850655 126850926 -72779224 - AluJo SINE Alu -18 294 28 6036 205 45 75 chr5 126850926 126851147 -72779003 - L1M4 LINE L1 -2517 3629 3403 2429 91 3 0 chr5 126851147 126851454 -72778696 + AluSp SINE Alu 1 308 -5 6036 205 45 75 chr5 126851454 126852540 -72777610 - L1M4 LINE L1 -2743 3403 2411 244 216 103 21 chr5 126852539 126852636 -72777514 - L1MEc LINE L1 -6242 154 50 * 2266 100 3 13 chr5 126852665 126852964 -72777186 - AluSx SINE Alu -16 296 1 2157 215 44 171 chr5 126853048 126853622 -72776528 + L2 LINE L2 2132 2671 -642 912 135 0 15 chr5 126853622 126853755 -72776395 + FLAM_C SINE Alu 7 137 -6 2157 215 44 171 chr5 126853755 126854061 -72776089 + L2 LINE L2 2671 3014 -299 2309 105 0 3 chr5 126854074 126854379 -72775771 - AluSc SINE Alu -5 304 1 342 243 37 65 chr5 126854379 126854486 -72775664 + L2 LINE L2 3210 3313 0 1393 192 0 0 chr5 126855259 126855488 -72774662 - AluJo SINE Alu 0 312 84 314 307 102 6 chr5 126855550 126855716 -72774434 + MIR SINE MIR 19 200 -62 2347 100 3 0 chr5 126856257 126856556 -72773594 + AluSp SINE Alu 1 300 -13 438 216 123 56 chr5 126856615 126856777 -72773373 - MER69A DNA AcHobo -4 173 1 232 353 161 22 chr5 126857136 126857547 -72772603 + L2 LINE L2 1846 2313 -1001 2199 107 59 34 chr5 126857575 126857930 -72772220 + THE1B LTR MaLR 1 364 0 7706 73 19 15 chr5 126857930 126858303 -72771847 + THE1B-int LTR MaLR 1 371 -1209 2168 124 10 0 chr5 126858303 126858609 -72771541 - AluSc SINE Alu 0 309 1 7706 73 19 15 chr5 126858609 126859310 -72770840 + THE1B-int LTR MaLR 371 1079 -501 4108 161 31 28 chr5 126859311 126860290 -72769860 + MER11C LTR ERVK 1 1067 -4 3649 90 0 12 chr5 126860294 126860807 -72769343 + THE1B-int LTR MaLR 1074 1580 0 2128 114 60 26 chr5 126860807 126861159 -72768991 + THE1B LTR MaLR 1 364 0 887 71 0 0 chr5 126861706 126861818 -72768332 + AluSg/x SINE Alu 201 312 0 754 129 26 0 chr5 126862084 126862200 -72767950 + AluSg/x SINE Alu 168 286 -24 254 261 70 0 chr5 126862216 126862358 -72767792 + L1M4 LINE L1 2257 2408 -3738 358 299 90 35 chr5 126862399 126862600 -72767550 + L1M4 LINE L1 2470 2681 -3465 2118 125 7 0 chr5 126862624 126862913 -72767237 - AluSx SINE Alu -21 291 1 215 159 34 45 chr5 126862962 126863050 -72767100 + (TAA)n Simple_repeat Simple_repeat 2 88 0 524 273 104 60 chr5 126863443 126863507 -72766643 + L1MEc LINE L1 1229 1289 -5107 2185 105 0 0 chr5 126863507 126863823 -72766327 + AluSg SINE Alu 6 321 0 524 273 104 60 chr5 126863823 126863946 -72766204 + L1MEc LINE L1 1289 1405 -4991 2137 123 13 3 chr5 126863946 126864248 -72765902 + AluSx SINE Alu 1 305 -7 524 273 104 60 chr5 126864248 126864461 -72765689 + L1MEc LINE L1 1405 1649 -4747 494 167 24 0 chr5 126864461 126864545 -72765605 - AluSp/q SINE Alu -17 296 211 414 275 28 99 chr5 126864548 126864612 -72765538 + L1MEc LINE L1 1655 1722 -4674 237 33 0 0 chr5 126864612 126864642 -72765508 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1485 156 84 0 chr5 126864647 126864776 -72765374 - AluSq SINE Alu -42 271 154 225 0 0 0 chr5 126864776 126864801 -72765349 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1485 156 84 0 chr5 126864801 126864921 -72765229 - AluSq SINE Alu -159 154 1 414 275 28 99 chr5 126864921 126865032 -72765118 + L1MEc LINE L1 1726 1823 -4573 2156 235 55 53 chr5 126865203 126865315 -72764835 + L1MEc LINE L1 2179 2289 -3926 666 203 15 23 chr5 126865315 126865448 -72764702 + FLAM_A SINE Alu 2 133 0 2156 235 55 53 chr5 126865448 126865558 -72764592 + L1MEc LINE L1 2289 2397 -3818 1885 114 4 0 chr5 126865558 126865812 -72764338 + AluSx SINE Alu 1 255 -57 2156 235 55 53 chr5 126865812 126866168 -72763982 + L1MEc LINE L1 2397 2751 -3464 2287 105 0 3 chr5 126866168 126866462 -72763688 - AluSq SINE Alu -20 293 1 1685 192 0 20 chr5 126866470 126866767 -72763383 - AluJo SINE Alu -21 291 1 2156 235 55 53 chr5 126866767 126867212 -72762938 + L1MEc LINE L1 2757 3215 -3000 1073 307 17 12 chr5 126867226 126867637 -72762513 + L1MEc LINE L1 29 441 -5955 1258 280 99 7 chr5 126867639 126868064 -72762086 + LTR16B LTR ERVL 1 464 0 903 309 69 49 chr5 126868066 126868735 -72761415 + HERV16 LTR ERVL 3 684 -4312 1977 276 28 4 chr5 126868763 126869259 -72760891 + HERV16 LTR ERVL 750 1257 -3739 1847 322 59 39 chr5 126869310 126870488 -72759662 + ERVL LTR ERVL 4266 4959 -37 1294 287 62 5 chr5 126870528 126870963 -72759187 + LTR16B LTR ERVL 3 462 -2 227 321 49 62 chr5 126870966 126871214 -72758936 + L1MEc LINE L1 440 683 -5713 2433 86 0 7 chr5 126871214 126871515 -72758635 + AluSg SINE Alu 1 299 -11 227 321 49 62 chr5 126871515 126871652 -72758498 + L1MEc LINE L1 683 820 -5576 2039 147 0 6 chr5 126871657 126871971 -72758179 + AluSx SINE Alu 1 312 0 2363 92 3 0 chr5 126871984 126872278 -72757872 + AluSq SINE Alu 1 295 -18 1464 179 82 0 chr5 126872303 126872571 -72757579 + AluJb SINE Alu 1 290 -22 25 0 0 0 chr5 126872571 126872596 -72757554 + AT_rich Low_complexity Low_complexity 1 25 0 312 202 161 42 chr5 126872606 126872774 -72757376 + L1MEc LINE L1 839 1026 -5370 1970 150 13 0 chr5 126872776 126873082 -72757068 + AluSx SINE Alu 3 312 0 3640 193 58 75 chr5 126873176 126873613 -72756537 + L1MEc LINE L1 2194 2637 -3578 2367 92 0 3 chr5 126873613 126873907 -72756243 + AluSx SINE Alu 1 293 -19 3640 193 58 75 chr5 126873907 126873921 -72756229 + L1MEc LINE L1 2637 2650 -3565 1708 146 44 7 chr5 126873921 126874233 -72755917 + AluSx SINE Alu 1 322 0 3640 193 58 75 chr5 126874233 126874550 -72755600 + L1MEc LINE L1 2650 2971 -3244 2498 84 3 0 chr5 126874550 126874861 -72755289 + AluSp SINE Alu 1 312 -1 3640 193 58 75 chr5 126874861 126875023 -72755127 + L1MEc LINE L1 2971 3134 -3081 2243 119 0 6 chr5 126875023 126875335 -72754815 + AluSg SINE Alu 1 310 0 3640 193 58 75 chr5 126875335 126875539 -72754611 + L1MEc LINE L1 3134 3312 -2903 2258 77 33 10 chr5 126875539 126875839 -72754311 + AluSp SINE Alu 1 307 -6 3640 193 58 75 chr5 126875839 126875909 -72754241 + L1MEc LINE L1 3312 3382 -2833 1414 164 4 55 chr5 126876025 126876300 -72753850 - AluJo SINE Alu -39 273 13 1829 262 70 37 chr5 126877067 126878460 -72751690 - L1MEc LINE L1 -3124 3091 1615 2617 221 70 47 chr5 126878466 126878761 -72751389 - L1ME2 LINE L1 -43 6121 5834 1671 179 0 11 chr5 126878761 126879040 -72751110 - AluJb SINE Alu -12 300 25 2617 221 70 47 chr5 126879040 126879679 -72750471 - L1ME2 LINE L1 -330 5834 5175 617 231 88 23 chr5 126879678 126879894 -72750256 - L1ME3 LINE L1 0 6162 5933 * 2320 116 3 0 chr5 126879894 126880204 -72749946 - AluSp SINE Alu -2 311 1 262 189 0 0 chr5 126880217 126880270 -72749880 + L1ME3A LINE L1 5905 5957 -213 602 121 0 0 chr5 126880275 126880358 -72749792 - AluS SINE Alu -229 84 2 689 293 41 32 chr5 126880366 126880707 -72749443 - L1ME2 LINE L1 -1100 5046 4703 1698 141 0 0 chr5 126880758 126881000 -72749150 - AluSg/x SINE Alu -3 309 68 555 32 0 0 chr5 126881024 126881087 -72749063 + THE1-int LTR MaLR 1017 1079 -501 4807 151 24 29 chr5 126881088 126882048 -72748102 + MER11C LTR ERVK 1 1044 -27 565 146 21 10 chr5 126882054 126882150 -72748000 - AluSg SINE Alu -212 98 2 2363 91 3 7 chr5 126882160 126882467 -72747683 - AluSx SINE Alu -6 306 1 1265 253 85 44 chr5 126882471 126882538 -72747612 + L1ME3A LINE L1 5088 5151 -1019 830 208 0 6 chr5 126882538 126882697 -72747453 + FRAM SINE Alu 4 161 -5 1265 253 85 44 chr5 126882697 126883376 -72746774 + L1ME3A LINE L1 5151 5866 -304 2036 124 17 0 chr5 126883614 126883904 -72746246 + AluSx SINE Alu 1 295 -17 1423 181 45 7 chr5 126884240 126884528 -72745622 + AluSq SINE Alu 1 299 -14 841 187 67 0 chr5 126884791 126884941 -72745209 - AluJo SINE Alu -20 292 133 317 62 21 0 chr5 126884952 126885000 -72745150 + (TTTTC)n Simple_repeat Simple_repeat 2 50 0 878 150 0 0 chr5 126885002 126885135 -72745015 - AluJo SINE Alu -169 133 1 1030 188 69 74 chr5 126885244 126885515 -72744635 - L1MC5 LINE L1 -51 7910 7639 2195 112 0 3 chr5 126885515 126885809 -72744341 - AluSx SINE Alu -19 293 1 1030 188 69 74 chr5 126885809 126885930 -72744220 - L1MC5 LINE L1 -322 7639 7518 1830 140 12 64 chr5 126885930 126886258 -72743892 - AluSx SINE Alu -1 311 1 1030 188 69 74 chr5 126886258 126886296 -72743854 - L1MC5 LINE L1 -443 7518 7481 2377 94 0 0 chr5 126886448 126886747 -72743403 - AluSq SINE Alu -14 299 1 1012 271 82 35 chr5 126887164 126887223 -72742927 + Tigger8 DNA MER2_type 174 229 -437 2298 104 0 10 chr5 126887223 126887522 -72742628 - AluSc SINE Alu -13 296 1 1012 271 82 35 chr5 126887522 126887737 -72742413 + Tigger8 DNA MER2_type 229 433 -233 1892 152 0 10 chr5 126887737 126888039 -72742111 + AluJb SINE Alu 1 299 -13 1012 271 82 35 chr5 126888039 126888216 -72741934 + Tigger8 DNA MER2_type 433 647 -19 333 246 114 9 chr5 126889486 126889600 -72740550 - MIR SINE MIR -1 261 136 872 116 0 16 chr5 126889630 126889751 -72740399 - FLAM_C SINE Alu -24 119 1 492 203 39 52 chr5 126889751 126889872 -72740278 - MIR SINE MIR -110 152 32 2176 100 14 0 chr5 126889872 126890163 -72739987 - AluSp SINE Alu -18 295 1 492 203 39 52 chr5 126890163 126890194 -72739956 - MIR SINE MIR -230 32 2 216 305 137 40 chr5 126890272 126890521 -72739629 - L2 LINE L2 -431 2883 2611 2199 117 0 3 chr5 126890784 126891082 -72739068 - AluSx SINE Alu -15 297 1 933 177 6 6 chr5 126891175 126891339 -72738811 + L1PB4 LINE L1 5990 6153 -3 890 186 76 13 chr5 126891929 126892166 -72737984 + L1MC5 LINE L1 7639 7890 -71 2200 112 0 3 chr5 126892179 126892474 -72737676 + AluSg SINE Alu 1 294 -16 2296 97 3 7 chr5 126892666 126892975 -72737175 - AluSx SINE Alu -4 308 1 746 160 0 46 chr5 126893681 126893812 -72736338 + FLAM_C SINE Alu 2 126 -17 2140 135 0 0 chr5 126893816 126894113 -72736037 + AluSx SINE Alu 1 297 -15 261 245 106 11 chr5 126894169 126894263 -72735887 - MIR SINE MIR -64 144 42 2511 73 3 0 chr5 126894779 126895080 -72735070 + AluSp SINE Alu 1 302 -11 2191 127 0 0 chr5 126895284 126895583 -72734567 + AluY SINE Alu 1 299 -12 419 310 10 80 chr5 126897763 126897908 -72732242 + MER91A DNA MER1_type 8 137 -59 2373 81 0 29 chr5 126897908 126898215 -72731935 - AluSg SINE Alu -12 298 1 419 310 10 80 chr5 126898215 126898269 -72731881 + MER91A DNA MER1_type 137 193 -3 2004 140 37 0 chr5 126898471 126898771 -72731379 - AluJb SINE Alu -1 311 1 2616 136 182 41 chr5 126898887 126899425 -72730725 + LTR18B LTR ERVL 1 614 0 324 0 0 0 chr5 126899455 126899491 -72730659 + (A)n Simple_repeat Simple_repeat 1 36 0 465 19 0 0 chr5 126899491 126899545 -72730605 + (TA)n Simple_repeat Simple_repeat 2 55 0 413 132 0 0 chr5 126899545 126899613 -72730537 + AluSp/q SINE Alu 236 303 -10 1057 159 0 12 chr5 126899921 126900091 -72730059 - FAM SINE Alu -12 173 6 1783 162 30 0 chr5 126900439 126900736 -72729414 + AluJo SINE Alu 1 306 -6 2360 99 0 0 chr5 126900767 126901069 -72729081 + AluSx SINE Alu 1 302 -10 443 286 134 0 chr5 126901257 126901428 -72728722 - MER91A DNA MER1_type -2 194 1 2314 206 66 35 chr5 126901524 126901708 -72728442 + MLT1G LTR MaLR 13 190 -400 2388 85 0 3 chr5 126901708 126902001 -72728149 + AluSx SINE Alu 1 292 -20 2314 206 66 35 chr5 126902001 126902398 -72727752 + MLT1G LTR MaLR 190 588 -2 1734 193 0 16 chr5 126902467 126902783 -72727367 + AluJo SINE Alu 1 311 -1 249 278 0 0 chr5 126902785 126902839 -72727311 + (CATA)n Simple_repeat Simple_repeat 2 55 0 672 224 98 39 chr5 126902841 126903230 -72726920 + L1MC5 LINE L1 7499 7910 -51 684 297 22 75 chr5 126904114 126904678 -72725472 + L1ME3A LINE L1 5422 5963 -199 1934 117 38 34 chr5 126904690 126904826 -72725324 + AluSx SINE Alu 1 135 -177 2306 105 3 0 chr5 126904826 126905131 -72725019 + AluSg SINE Alu 2 307 -3 1934 117 38 34 chr5 126905131 126905285 -72724865 + AluSx SINE Alu 135 292 -20 693 262 84 54 chr5 126905630 126905959 -72724191 + L1ME4a LINE L1 5627 5945 -176 1988 151 3 0 chr5 126905959 126906275 -72723875 + AluJb SINE Alu 1 312 0 2213 123 0 0 chr5 126906278 126906586 -72723564 + AluSx SINE Alu 1 308 -4 693 262 84 54 chr5 126906586 126906717 -72723433 + L1ME4a LINE L1 5946 6105 -16 1079 64 0 0 chr5 126906756 126906881 -72723269 - AluSq/x SINE Alu -187 125 1 397 268 131 0 chr5 126906932 126907100 -72723050 - MIR SINE MIR 0 262 73 1982 161 0 0 chr5 126907381 126907691 -72722459 - AluJb SINE Alu -2 310 1 1155 111 82 39 chr5 126908676 126908884 -72721266 + L1MD2 LINE L1 6119 6335 -24 2113 124 0 0 chr5 126908887 126909189 -72720961 + AluSq SINE Alu 1 302 0 2015 101 0 69 chr5 126909198 126909534 -72720616 + AluSq SINE Alu 1 315 0 2186 120 3 10 chr5 126909900 126910209 -72719941 - AluSg SINE Alu -3 307 1 289 221 47 35 chr5 126910573 126910593 -72719557 + MIR SINE MIR 176 194 -68 2178 117 7 0 chr5 126910593 126910892 -72719258 + AluSq SINE Alu 1 301 -12 289 221 47 35 chr5 126910892 126910957 -72719193 + MIR SINE MIR 194 262 0 281 285 80 7 chr5 126910975 126911112 -72719038 - L3b LINE CR1 -246 1337 1191 2262 92 0 0 chr5 126912082 126912366 -72717784 - AluSg SINE Alu 0 310 27 2197 124 0 0 chr5 126912366 126912663 -72717487 - AluSg SINE Alu -11 299 1 2323 114 0 0 chr5 126912674 126912973 -72717177 - AluSx SINE Alu -13 299 1 334 294 123 38 chr5 126912974 126913179 -72716971 - L1ME4a LINE L1 0 6121 5882 2352 100 0 3 chr5 126913179 126913489 -72716661 - AluSg SINE Alu -1 309 1 334 294 123 38 chr5 126913489 126913575 -72716575 - L1ME4a LINE L1 -239 5882 5805 2327 96 20 0 chr5 126914308 126914611 -72715539 - AluSx SINE Alu -3 309 1 687 253 21 50 chr5 126914740 126914795 -72715355 - MIR SINE MIR 0 262 207 2147 126 0 7 chr5 126914795 126915096 -72715054 - AluSx SINE Alu -13 299 1 687 253 21 50 chr5 126915096 126915281 -72714869 - MIR SINE MIR -55 207 29 2420 94 3 0 chr5 126916179 126916486 -72713664 + AluSx SINE Alu 1 308 -4 193 275 101 46 chr5 126920493 126920602 -72709548 + MIR SINE MIR 30 144 -64 2218 113 10 0 chr5 126922552 126922852 -72707298 - AluSq SINE Alu -10 303 1 1968 106 0 14 chr5 126923125 126923407 -72706743 + AluY SINE Alu 1 278 -33 2296 110 7 0 chr5 126924061 126924360 -72705790 - AluSx SINE Alu -2 310 10 2294 113 0 0 chr5 126924514 126924815 -72705335 - AluSx SINE Alu -11 301 1 272 188 17 145 chr5 126925532 126925575 -72704575 - MIR3 SINE MIR -14 194 147 2276 97 7 3 chr5 126925575 126925883 -72704267 + AluY SINE Alu 1 309 -2 272 188 17 145 chr5 126925883 126925956 -72704194 - MIR3 SINE MIR -61 147 93 1406 135 73 99 chr5 126926428 126926783 -72703367 + MER7A DNA MER2_type 2 345 -1 2244 99 10 7 chr5 126927242 126927545 -72702605 - AluSp SINE Alu -9 304 1 685 206 0 8 chr5 126927746 126927872 -72702278 + FLAM_C SINE Alu 6 130 -13 2121 122 7 10 chr5 126927988 126928291 -72701859 - AluSx SINE Alu -6 306 5 1608 166 6 62 chr5 126928811 126928937 -72701213 + AluJo SINE Alu 1 132 -180 2241 110 0 22 chr5 126928937 126929256 -72700894 - AluSx SINE Alu 0 312 1 1608 166 6 62 chr5 126929256 126929454 -72700696 + AluJo SINE Alu 132 307 -5 1879 165 3 13 chr5 126930381 126930690 -72699460 - AluSx SINE Alu -4 308 3 1637 187 35 0 chr5 126930747 126931036 -72699114 - AluJo SINE Alu -13 299 1 239 146 21 0 chr5 126931039 126931087 -72699063 - Alu SINE Alu -168 134 86 * 8072 130 33 18 chr5 126931069 126932388 -72697762 - Tigger1 DNA MER2_type -1080 1338 1 2128 101 11 7 chr5 126932425 126932711 -72697439 - AluSx SINE Alu -25 287 1 2102 108 14 7 chr5 126932773 126933068 -72697082 + AluSq SINE Alu 3 299 -14 997 145 21 0 chr5 126933300 126933445 -72696705 + AluJb SINE Alu 147 294 -18 1693 154 99 0 chr5 126933710 126933983 -72696167 - AluSx SINE Alu -12 300 1 497 154 87 10 chr5 126934405 126934509 -72695641 - AluJb SINE Alu -1 311 200 1191 176 34 34 chr5 126934509 126934742 -72695408 - AluJo SINE Alu -73 239 7 1971 125 10 24 chr5 126934756 126935052 -72695098 - AluSx SINE Alu -20 292 1 240 217 0 0 chr5 126935811 126935856 -72694294 + Tigger5 DNA MER2_type 34 78 -2245 347 282 0 0 chr5 126935856 126935934 -72694216 - Tigger5 DNA MER2_type -3 2320 2243 1393 178 29 4 chr5 126936701 126936943 -72693207 + AluJb SINE Alu 12 259 -53 306 137 0 0 chr5 126936943 126936994 -72693156 - AluJ/FLAM SINE Alu -218 84 34 314 239 7 92 chr5 126936994 126937117 -72693033 - MER5B DNA MER1_type -1 177 66 2144 127 0 3 chr5 126937117 126937416 -72692734 - AluSx SINE Alu -14 298 1 314 239 7 92 chr5 126937416 126937434 -72692716 - MER5B DNA MER1_type -112 66 48 212 241 35 0 chr5 126937647 126937705 -72692445 + L2 LINE L2 3175 3234 -38 1172 174 186 16 chr5 126937783 126938041 -72692109 + AluJo SINE Alu 1 302 0 2216 108 7 7 chr5 126938855 126939161 -72690989 + AluSx SINE Alu 1 306 -6 1516 169 20 30 chr5 126939300 126939601 -72690549 + AluJo SINE Alu 1 298 -14 1674 158 20 30 chr5 126939776 126940074 -72690076 + AluJb SINE Alu 1 295 -17 242 163 0 0 chr5 126940455 126940498 -72689652 + MIR3 SINE MIR 121 163 -45 1068 172 54 0 chr5 126940612 126940798 -72689352 + AluJo SINE Alu 86 281 -31 1843 157 100 3 chr5 126940828 126941179 -72688971 + MLT1B LTR MaLR 5 389 -1 663 178 113 5 chr5 126941226 126941411 -72688739 + L1ME1 LINE L1 4990 5194 -952 3363 207 58 24 chr5 126941416 126942248 -72687902 + L1ME1 LINE L1 5254 6113 -53 884 158 0 20 chr5 126943267 126943413 -72686737 - AluJo SINE Alu -169 143 1 272 240 152 41 chr5 126943618 126943789 -72686361 - MIR SINE MIR -46 216 27 351 206 137 64 chr5 126944397 126944616 -72685534 + L1ME4a LINE L1 5804 6038 -83 673 231 0 0 chr5 126945513 126945643 -72684507 - FLAM_C SINE Alu -3 130 1 2281 81 14 0 chr5 126945683 126945967 -72684183 + AluSx SINE Alu 1 288 -24 2479 67 0 10 chr5 126946127 126946440 -72683710 - AluY SINE Alu -1 310 1 180 0 0 0 chr5 126946445 126946465 -72683685 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1829 170 10 0 chr5 126949001 126949289 -72680861 + AluSx SINE Alu 1 291 -21 384 219 52 10 chr5 126949545 126949641 -72680509 - MER5B DNA MER1_type -73 105 6 2215 99 7 0 chr5 126949641 126949934 -72680216 + AluSq SINE Alu 1 295 -18 230 273 99 29 chr5 126950214 126950386 -72679764 - Tigger8 DNA MER2_type -158 508 325 443 294 24 8 chr5 126950434 126950560 -72679590 - Tigger8 DNA MER2_type -441 225 98 404 159 31 35 chr5 126950820 126950920 -72679230 - MER2 DNA MER2_type 0 345 246 2225 100 0 20 chr5 126950920 126951221 -72678929 + AluSx SINE Alu 1 295 -17 404 159 31 35 chr5 126951221 126951290 -72678860 - MER2 DNA MER2_type -99 246 128 2059 131 10 0 chr5 126951367 126951665 -72678485 - AluSx SINE Alu -11 301 1 247 208 0 38 chr5 126951728 126951781 -72678369 - MER2 DNA MER2_type -293 52 2 1503 165 62 4 chr5 126951983 126952255 -72677895 + AluSx SINE Alu 2 289 -23 2353 74 3 29 chr5 126953990 126954299 -72675851 + AluSg1 SINE Alu 2 302 -7 229 274 104 47 chr5 126955331 126955402 -72674748 + MER81 DNA DNA 1 81 -33 2326 115 3 3 chr5 126955402 126955715 -72674435 - AluSq SINE Alu 0 313 1 229 274 104 47 chr5 126955715 126955749 -72674401 + MER81 DNA DNA 81 112 -2 264 245 236 0 chr5 126956301 126956407 -72673743 - L2 LINE L2 -8 3264 3134 21 57 0 0 chr5 126956594 126956629 -72673521 + AT_rich Low_complexity Low_complexity 1 35 0 261 125 21 0 chr5 126956649 126956697 -72673453 - L2 LINE L2 -271 3042 2994 235 321 201 5 chr5 126956904 126957113 -72673037 + L2 LINE L2 1141 1390 -1924 2235 98 3 3 chr5 126957179 126957475 -72672675 - AluSq SINE Alu -17 296 1 1194 288 229 34 chr5 126957479 126957878 -72672272 + L2 LINE L2 1598 1918 -1395 1648 166 74 0 chr5 126957878 126958161 -72671989 - AluJo SINE Alu -8 304 1 1194 288 229 34 chr5 126958161 126958768 -72671382 + L2 LINE L2 1918 2406 -907 2393 72 10 0 chr5 126958768 126959060 -72671090 + AluSx SINE Alu 17 311 -1 1194 288 229 34 chr5 126959060 126959422 -72670728 + L2 LINE L2 2406 3245 -68 555 266 63 5 chr5 126960430 126960637 -72669513 + MIR SINE MIR 37 255 -7 2237 95 3 17 chr5 126961183 126961477 -72668673 - AluSx SINE Alu -19 293 4 2522 201 74 46 chr5 126961498 126961608 -72668542 - L1ME3 LINE L1 -9 6153 6048 1810 138 49 26 chr5 126961608 126961737 -72668413 + AluJo SINE Alu 1 126 -186 2282 106 0 10 chr5 126961737 126962038 -72668112 + AluSq SINE Alu 1 298 -15 1810 138 49 26 chr5 126962038 126962213 -72667937 + AluJo SINE Alu 126 312 0 2522 201 74 46 chr5 126962213 126962780 -72667370 - L1ME3 LINE L1 -114 6048 5457 407 277 13 16 chr5 126962791 126962941 -72667209 - MIR SINE MIR -62 146 36 2114 139 0 0 chr5 126962963 126963264 -72666886 - AluJb SINE Alu -11 301 1 333 180 175 8 chr5 126964100 126964215 -72665935 - MIR3 SINE MIR -54 154 7 2148 94 0 66 chr5 126964403 126964722 -72665428 - AluSx SINE Alu -14 298 1 229 289 133 11 chr5 126965460 126965550 -72664600 - MER5A DNA MER1_type -28 161 61 2028 135 3 0 chr5 126965764 126966061 -72664089 - AluJb SINE Alu -14 298 1 193 265 132 15 chr5 126966899 126966967 -72663183 + MIR SINE MIR 1 76 -186 249 311 8 25 chr5 126967080 126967097 -72663053 + (CACG)n Simple_repeat Simple_repeat 2 18 -103 185 0 0 39 chr5 126967097 126967123 -72663027 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 249 311 8 25 chr5 126967123 126967227 -72662923 + (CACG)n Simple_repeat Simple_repeat 18 121 0 22 70 0 0 chr5 126969046 126969089 -72661061 + AT_rich Low_complexity Low_complexity 1 43 0 1491 182 7 53 chr5 126971074 126971228 -72658922 - AluJo SINE Alu -23 289 129 2190 96 3 7 chr5 126971228 126971519 -72658631 - AluSp SINE Alu -23 290 1 2286 112 0 6 chr5 126971527 126971839 -72658311 - AluSg SINE Alu 0 310 1 1491 182 7 53 chr5 126971839 126971977 -72658173 - AluJo SINE Alu -190 122 2 22 0 0 0 chr5 126971979 126972001 -72658149 + AT_rich Low_complexity Low_complexity 1 22 0 235 327 158 0 chr5 126972271 126972372 -72657778 - L2 LINE L2 -34 3238 3122 2173 128 3 0 chr5 126972501 126972807 -72657343 - AluSp SINE Alu -6 307 1 575 122 12 0 chr5 126974263 126974345 -72655805 + AluJo SINE Alu 56 138 -174 2311 82 0 20 chr5 126974373 126974550 -72655600 - AluSq SINE Alu 0 309 139 2352 97 0 3 chr5 126974550 126974850 -72655300 - AluSg SINE Alu -11 299 1 2311 82 0 20 chr5 126974850 126974987 -72655163 - AluSq SINE Alu -170 139 1 1617 259 202 11 chr5 126975325 126975988 -72654162 + L2 LINE L2 1853 2642 -672 287 281 42 0 chr5 126976312 126976408 -72653742 - L1P LINE L1 -1145 5001 4902 2024 138 8 48 chr5 126976595 126976746 -72653404 + MER2 DNA MER2_type 2 157 -187 2460 58 0 7 chr5 126976746 126977041 -72653109 + AluY SINE Alu 1 293 -18 2024 138 8 48 chr5 126977041 126977245 -72652905 + MER2 DNA MER2_type 157 343 -1 342 248 101 54 chr5 126977899 126977960 -72652190 - L1MC4a LINE L1 -1810 5998 5941 2456 97 0 3 chr5 126977960 126978269 -72651881 - AluSc SINE Alu 0 309 2 342 248 101 54 chr5 126978269 126978336 -72651814 - L1MC4a LINE L1 -1867 5941 5864 1982 123 35 3 chr5 126978374 126978659 -72651491 - AluSx SINE Alu -18 294 1 2246 101 24 3 chr5 126978667 126978965 -72651185 - AluSg SINE Alu -5 305 2 1956 99 19 4 chr5 126978966 126979228 -72650922 - AluSx SINE Alu -12 300 35 871 124 54 38 chr5 126979314 126979499 -72650651 - L1MB4 LINE L1 -6 6174 5987 838 96 30 0 chr5 126979550 126979685 -72650465 - L1MB4 LINE L1 -201 5979 5841 461 58 43 0 chr5 126979704 126979773 -72650377 - L1MB4 LINE L1 -6 6174 6103 657 325 136 16 chr5 126979968 126980218 -72649932 - L2 LINE L2 -24 3289 3070 2250 100 10 3 chr5 126980218 126980518 -72649632 - AluSq SINE Alu -11 302 1 657 325 136 16 chr5 126980518 126980701 -72649449 - L2 LINE L2 -243 3070 2804 1788 179 0 10 chr5 126980730 126981049 -72649101 - AluJb SINE Alu 0 312 1 27 0 0 0 chr5 126981282 126981309 -72648841 + AT_rich Low_complexity Low_complexity 1 27 0 2116 148 7 0 chr5 126981326 126981630 -72648520 - AluJb SINE Alu -6 306 1 769 174 25 0 chr5 126981646 126981767 -72648383 - FLAM_C SINE Alu -17 126 3 2039 98 73 7 chr5 126981876 126982162 -72647988 + AluSq SINE Alu 1 305 -8 1662 163 71 14 chr5 126982171 126982453 -72647697 + AluJb SINE Alu 1 298 -14 312 308 17 47 chr5 126982565 126982737 -72647413 - L1MC4 LINE L1 -1 8041 7875 239 272 43 11 chr5 126982819 126982911 -72647239 - L1ME LINE L1 -487 5634 5540 2843 224 106 34 chr5 126983695 126984200 -72645950 + L1M4 LINE L1 2114 2581 -3565 2184 118 0 3 chr5 126984200 126984489 -72645661 - AluSq SINE Alu -25 288 1 2843 224 106 34 chr5 126984489 126984580 -72645570 + L1M4 LINE L1 2581 2664 -3482 2013 146 0 14 chr5 126984580 126984716 -72645434 + AluSx SINE Alu 1 137 -175 2497 74 0 0 chr5 126984716 126985015 -72645135 + AluY SINE Alu 1 299 -12 2013 146 0 14 chr5 126985015 126985173 -72644977 + AluSx SINE Alu 137 291 -21 2843 224 106 34 chr5 126985173 126985610 -72644540 + L1M4 LINE L1 2664 3223 -2923 414 226 39 0 chr5 126988192 126988294 -72641856 + MER58 DNA MER1_type 1 106 -109 234 0 0 0 chr5 126988296 126988322 -72641828 + (TC)n Simple_repeat Simple_repeat 1 26 0 1732 181 7 10 chr5 126988467 126988759 -72641391 + AluJo SINE Alu 1 291 -21 2381 101 0 7 chr5 126990090 126990397 -72639753 - AluSg SINE Alu -5 305 1 407 59 0 0 chr5 126991002 126991053 -72639097 - MER66A LTR ERV1 -141 337 287 1750 163 7 39 chr5 126991062 126991369 -72638781 - AluJo SINE Alu -11 301 5 2354 78 0 14 chr5 126991723 126992017 -72638133 + AluSc SINE Alu 1 290 -19 38 0 0 0 chr5 126992346 126992384 -72637766 + AT_rich Low_complexity Low_complexity 1 38 0 207 0 0 0 chr5 126993235 126993258 -72636892 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1113 150 4 101 chr5 126995249 126995496 -72634654 + L1PB4 LINE L1 5929 6151 -5 471 110 0 66 chr5 126995497 126995588 -72634562 + L1PB4 LINE L1 6072 6156 0 780 56 0 18 chr5 126995704 126995824 -72634326 + L1PA3 LINE L1 6017 6155 0 2432 82 7 0 chr5 126996565 126996869 -72633281 - AluSx SINE Alu -6 306 1 243 342 80 27 chr5 127002697 127002922 -72627228 + L2 LINE L2 2640 2876 -438 291 301 98 26 chr5 127002972 127003125 -72627025 + L2 LINE L2 3025 3188 -84 547 312 50 68 chr5 127004003 127004384 -72625766 + L2 LINE L2 2876 3249 -23 226 295 74 21 chr5 127005777 127005872 -72624278 - MIR SINE MIR -118 144 45 2513 79 0 9 chr5 127007106 127007421 -72622729 - AluSx SINE Alu 0 312 1 183 246 31 77 chr5 127007734 127007799 -72622351 + MIR SINE MIR 46 107 -155 3021 219 201 16 chr5 127008316 127009301 -72620849 + L2 LINE L2 1622 2816 -498 1909 143 0 23 chr5 127009301 127009601 -72620549 + AluJo SINE Alu 1 293 -19 3021 219 201 16 chr5 127009601 127009667 -72620483 + L2 LINE L2 2816 2868 -446 232 281 58 79 chr5 127009766 127009905 -72620245 + MIR SINE MIR 35 170 -92 204 308 58 42 chr5 127011450 127011570 -72618580 - L3 LINE CR1 -87 1490 1369 204 67 33 0 chr5 127012185 127012215 -72617935 - L2 LINE L2 -18 3295 3265 587 228 146 12 chr5 127012260 127012431 -72617719 - MIR SINE MIR -20 242 49 209 330 10 21 chr5 127013220 127013317 -72616833 - MIR SINE MIR -87 175 80 333 296 117 28 chr5 127013376 127013555 -72616595 + L2 LINE L2 2873 3067 -205 509 260 20 53 chr5 127013965 127014115 -72616035 - MER91A DNA MER1_type 0 196 52 395 250 30 0 chr5 127015402 127015502 -72614648 - MIR SINE MIR -121 141 39 371 233 278 15 chr5 127016480 127016613 -72613537 + MIR SINE MIR 36 203 -59 574 287 76 40 chr5 127017501 127017648 -72612502 + MIR SINE MIR 20 179 -83 2415 79 0 0 chr5 127017648 127017941 -72612209 - AluSg SINE Alu -15 295 5 574 287 76 40 chr5 127017941 127018016 -72612134 + MIR SINE MIR 179 250 -12 426 308 9 0 chr5 127018033 127018140 -72612010 - L2 LINE L2 -2 3270 3163 195 253 67 13 chr5 127018856 127018931 -72611219 + MIR3 SINE MIR 104 182 -26 253 215 138 0 chr5 127019525 127019590 -72610560 - MIR SINE MIR -109 153 80 180 327 79 0 chr5 127020448 127020549 -72609601 + MIR3 SINE MIR 61 169 -39 494 291 40 7 chr5 127021451 127021599 -72608551 - MIR SINE MIR -44 218 66 2242 93 10 16 chr5 127022950 127023260 -72606890 - AluSx SINE Alu -4 308 1 186 317 67 0 chr5 127023678 127023738 -72606412 - MIR SINE MIR -76 186 123 484 278 88 53 chr5 127023816 127024388 -72605762 - L2 LINE L2 -158 3114 2522 1509 164 0 16 chr5 127025050 127025306 -72604844 - L1MB7 LINE L1 -16 6168 5917 1231 163 18 22 chr5 127025565 127025792 -72604358 + AluJo SINE Alu 87 312 0 48 88 0 0 chr5 127029351 127029476 -72600674 + GC_rich Low_complexity Low_complexity 1 125 0 27 0 0 0 chr5 127029612 127029639 -72600511 + GC_rich Low_complexity Low_complexity 1 27 0 40 59 0 0 chr5 127029663 127029731 -72600419 + GC_rich Low_complexity Low_complexity 1 68 0 35 63 0 0 chr5 127029864 127029927 -72600223 + GC_rich Low_complexity Low_complexity 1 63 0 1025 245 31 16 chr5 127032521 127032778 -72597372 - MIR SINE MIR -1 261 1 598 336 4 23 chr5 127033315 127033570 -72596580 + MIR SINE MIR 6 252 -10 236 318 110 58 chr5 127034643 127034766 -72595384 + MIR3 SINE MIR 36 170 -38 2249 104 0 0 chr5 127034766 127035064 -72595086 - AluSq SINE Alu -15 298 1 236 318 110 58 chr5 127035064 127035094 -72595056 + MIR3 SINE MIR 170 197 -11 209 279 29 0 chr5 127035339 127035407 -72594743 + L2 LINE L2 3203 3272 0 657 325 37 21 chr5 127036574 127036817 -72593333 + MIR SINE MIR 15 261 -1 709 319 67 19 chr5 127036938 127037298 -72592852 + L3 LINE CR1 1133 1509 -68 359 256 5 168 chr5 127037672 127037842 -72592308 + MIR SINE MIR 16 131 -131 2311 91 0 0 chr5 127037842 127038140 -72592010 + AluSg SINE Alu 1 298 -12 359 256 5 168 chr5 127038140 127038218 -72591932 + MIR SINE MIR 131 220 -42 681 303 76 5 chr5 127038261 127038472 -72591678 - MIR SINE MIR -24 238 13 272 278 11 44 chr5 127038930 127039020 -72591130 + L2 LINE L2 3184 3270 -2 548 226 40 0 chr5 127039047 127039171 -72590979 - MIR SINE MIR -55 207 79 2031 134 0 3 chr5 127041132 127041438 -72588712 + AluJb SINE Alu 1 305 -7 28 0 0 47 chr5 127041839 127041863 -72588287 + AT_rich Low_complexity Low_complexity 1 24 -17 2434 69 3 0 chr5 127041863 127042168 -72587982 - AluSp SINE Alu -7 306 1 28 0 0 47 chr5 127042168 127042186 -72587964 + AT_rich Low_complexity Low_complexity 24 41 0 1780 79 124 15 chr5 127042980 127043247 -72586903 - AluSg SINE Alu -14 296 1 245 325 48 44 chr5 127043263 127043378 -72586772 - MIR SINE MIR -64 144 40 247 245 64 11 chr5 127043467 127043561 -72586589 - LTR67 LTR ERVL -1 556 458 1749 182 3 10 chr5 127044672 127044980 -72585170 + AluJo SINE Alu 1 306 -6 1843 108 0 96 chr5 127046030 127046370 -72583780 + AluSx SINE Alu 1 310 0 2119 125 3 3 chr5 127046370 127046682 -72583468 + AluSq SINE Alu 2 313 0 1793 145 59 0 chr5 127047656 127047945 -72582205 + AluJb SINE Alu 6 311 -1 961 198 21 5 chr5 127048642 127048834 -72581316 + MER3 DNA MER1_type 15 209 0 1702 180 0 3 chr5 127049020 127049350 -72580800 - AluJo SINE Alu 0 329 1 229 234 63 54 chr5 127049351 127049462 -72580688 - MER103 DNA DNA -47 119 8 2429 62 7 0 chr5 127049825 127050130 -72580020 - AluY SINE Alu -4 307 1 1271 105 0 0 chr5 127051852 127052023 -72578127 - AluSg/x SINE Alu -11 301 131 341 310 126 23 chr5 127052345 127052519 -72577631 + MIR SINE MIR 5 196 -66 379 298 193 6 chr5 127052669 127052840 -72577310 + MIR SINE MIR 32 234 -28 193 300 108 25 chr5 127053010 127053130 -72577020 + L2 LINE L2 2932 3061 -211 186 182 114 0 chr5 127053330 127053374 -72576776 - L2 LINE L2 -9 3304 3256 317 297 11 0 chr5 127054033 127054124 -72576026 - MIR3 SINE MIR -29 179 88 2299 98 0 7 chr5 127054533 127054839 -72575311 - AluSx SINE Alu -8 304 1 315 285 102 24 chr5 127055552 127055721 -72574429 + L1ME3A LINE L1 5806 5992 -170 440 281 46 36 chr5 127055767 127055963 -72574187 + L1ME3A LINE L1 5973 6170 0 2173 79 0 17 chr5 127056353 127056679 -72573471 - AluSq SINE Alu 0 321 1 2193 84 7 3 chr5 127056679 127056974 -72573176 - AluSx SINE Alu -15 297 1 306 122 0 54 chr5 127057827 127057901 -72572249 + (GGAGAA)n Simple_repeat Simple_repeat 3 72 0 2022 135 0 10 chr5 127058332 127058636 -72571514 - AluSx SINE Alu -11 301 1 1416 193 50 53 chr5 127058636 127058937 -72571213 - AluJo SINE Alu -12 300 1 2505 68 0 0 chr5 127059176 127059486 -72570664 + AluY SINE Alu 1 310 -1 454 274 100 12 chr5 127059589 127059749 -72570401 + MIR3 SINE MIR 37 208 0 439 244 20 114 chr5 127059782 127059983 -72570167 - MIR SINE MIR -36 226 45 357 197 55 158 chr5 127060424 127060607 -72569543 - MIR SINE MIR -48 214 51 230 262 215 9 chr5 127060761 127060868 -72569282 + L2 LINE L2 3139 3267 -5 182 337 79 50 chr5 127061028 127061060 -72569090 + MIR SINE MIR 2 32 -230 2325 96 3 3 chr5 127061060 127061373 -72568777 + AluSq SINE Alu 1 313 0 182 337 79 50 chr5 127061373 127061441 -72568709 + MIR SINE MIR 32 105 -157 410 221 29 29 chr5 127061469 127061609 -72568541 - MER104 DNA Tc2 -3 177 38 2902 204 32 40 chr5 127061665 127062438 -72567712 + L1ME1 LINE L1 5341 6107 -59 1791 166 10 22 chr5 127063071 127063213 -72566937 + AluSx SINE Alu 1 143 -169 2366 67 7 3 chr5 127063213 127063510 -72566640 + AluSq SINE Alu 1 298 -15 1791 166 10 22 chr5 127063510 127063681 -72566469 + AluSx SINE Alu 143 310 -2 22 0 0 0 chr5 127063692 127063714 -72566436 + AT_rich Low_complexity Low_complexity 1 22 0 223 244 133 11 chr5 127063821 127063911 -72566239 + MIR SINE MIR 151 251 -11 202 302 16 0 chr5 127064131 127064194 -72565956 - MIR SINE MIR -69 139 76 183 388 57 19 chr5 127064985 127065194 -72564956 + L2 LINE L2 2375 2591 -723 1885 152 0 7 chr5 127065303 127065606 -72564544 + AluJb SINE Alu 1 301 -11 2414 99 0 0 chr5 127065627 127065939 -72564211 + AluSq SINE Alu 1 312 -1 551 208 75 8 chr5 127066876 127066996 -72563154 + MIR SINE MIR 108 235 -27 257 167 0 0 chr5 127067143 127067185 -72562965 + L2 LINE L2 3227 3268 -4 2143 121 7 0 chr5 127067289 127067586 -72562564 - AluSx SINE Alu -11 301 3 313 290 31 117 chr5 127068016 127068306 -72561844 - L2 LINE L2 -32 3240 2976 2141 110 7 0 chr5 127068306 127068606 -72561544 + AluSx SINE Alu 1 302 -10 2209 58 0 14 chr5 127068700 127069018 -72561132 + AluSc SINE Alu 1 314 0 1916 109 25 0 chr5 127070229 127070555 -72559595 - AluY SINE Alu 0 333 1 555 321 18 5 chr5 127070785 127071003 -72559147 - L1MC4a LINE L1 -1902 5906 5686 709 253 62 0 chr5 127071115 127071293 -72558857 - MER5A DNA MER1_type 0 189 1 187 304 165 25 chr5 127072346 127072425 -72557725 + L2 LINE L2 3222 3311 -2 234 295 101 22 chr5 127073640 127073779 -72556371 + L1ME3A LINE L1 5570 5719 -402 412 193 18 37 chr5 127073951 127074060 -72556090 + L1ME4a LINE L1 5942 6048 -73 1599 165 6 25 chr5 127074140 127074456 -72555694 + AluSg SINE Alu 1 310 0 2925 94 39 7 chr5 127074456 127074870 -72555280 - MER41A LTR ERV1 -127 427 1 1587 209 32 22 chr5 127076171 127076540 -72553610 - MLT1A2 LTR MaLR 0 374 2 886 305 112 23 chr5 127077069 127078000 -72552150 - L1MDa LINE L1 -4453 1762 790 1974 134 0 7 chr5 127082001 127082307 -72547843 + AluSx SINE Alu 6 309 -3 190 373 9 18 chr5 127083420 127083530 -72546620 - MIR SINE MIR -31 231 123 180 233 136 48 chr5 127084058 127084161 -72545989 - MIR SINE MIR -109 153 42 392 265 41 7 chr5 127085371 127085518 -72544632 + MER103 DNA DNA 4 155 -11 750 259 39 5 chr5 127085933 127086138 -72544012 + MIR SINE MIR 15 226 -36 332 308 143 36 chr5 127087440 127087826 -72542324 - L2 LINE L2 -507 2807 2381 232 319 60 37 chr5 127087934 127088150 -72542000 - L2 LINE L2 -1282 2032 1812 2203 113 0 0 chr5 127088219 127088520 -72541630 + AluSx SINE Alu 1 301 -11 327 278 106 27 chr5 127089328 127089497 -72540653 + L1ME3A LINE L1 5806 5992 -170 328 245 71 61 chr5 127089543 127089739 -72540411 + L1ME3A LINE L1 5973 6170 0 221 0 35 0 chr5 127090180 127090209 -72539941 + (TTTTG)n Simple_repeat Simple_repeat 4 33 0 399 300 40 75 chr5 127091475 127091728 -72538422 + MIR SINE MIR 3 246 -16 244 220 0 0 chr5 127091859 127091909 -72538241 + L2 LINE L2 3261 3310 -3 1952 148 82 0 chr5 127093360 127093677 -72536473 - MER61A LTR ERV1 0 343 1 624 239 28 0 chr5 127093718 127093860 -72536290 - MIR SINE MIR -103 159 14 235 313 56 60 chr5 127095459 127095708 -72534442 + L2 LINE L2 2825 3072 -200 313 300 175 15 chr5 127095973 127096173 -72533977 + MIR SINE MIR 31 262 0 1036 174 0 11 chr5 127096517 127096701 -72533449 + AluSg/x SINE Alu 103 284 -26 651 26 0 0 chr5 127096701 127096778 -72533372 + (CAATA)n Simple_repeat Simple_repeat 2 78 0 24 0 0 0 chr5 127096928 127096952 -72533198 + AT_rich Low_complexity Low_complexity 1 24 0 511 222 20 0 chr5 127097245 127097344 -72532806 - MER63 DNA MER1_type -275 786 686 407 185 12 12 chr5 127097406 127097487 -72532663 - MER5A DNA MER1_type -99 90 10 534 174 76 28 chr5 127097634 127097778 -72532372 + MIR SINE MIR 101 251 -11 219 119 48 0 chr5 127099133 127099175 -72530975 + A-rich Low_complexity Low_complexity 1 44 0 189 107 0 0 chr5 127099743 127099771 -72530379 + (T)n Simple_repeat Simple_repeat 1 28 0 349 256 77 26 chr5 127100417 127100534 -72529616 + L2 LINE L2 3191 3313 0 21 57 0 0 chr5 127101085 127101120 -72529030 + AT_rich Low_complexity Low_complexity 1 35 0 520 254 83 51 chr5 127101148 127101498 -72528652 + L1ME4a LINE L1 5529 5889 -232 527 206 86 127 chr5 127101544 127101835 -72528315 + MER102b DNA MER1_type 33 311 -30 406 209 48 9 chr5 127101916 127102021 -72528129 + L1ME4a LINE L1 6011 6119 -2 2694 7 0 0 chr5 127102245 127102545 -72527605 - AluYa5 SINE Alu -11 300 1 25 0 0 0 chr5 127102880 127102905 -72527245 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 127103542 127103563 -72526587 + AT_rich Low_complexity Low_complexity 1 21 0 486 219 98 31 chr5 127104286 127104468 -72525682 + L1ME1 LINE L1 5941 6131 -31 2359 80 0 6 chr5 127104468 127104780 -72525370 + AluSg SINE Alu 1 310 0 1718 156 24 0 chr5 127105162 127105457 -72524693 - AluJb SINE Alu -2 310 9 936 210 130 23 chr5 127105770 127106032 -72524118 + AluSg SINE Alu 12 301 -9 293 237 103 39 chr5 127106312 127106468 -72523682 - HAL1 LINE L1 -2 2505 2340 2076 134 0 0 chr5 127107127 127107432 -72522718 - AluSx SINE Alu -5 307 3 782 143 56 0 chr5 127107530 127107656 -72522494 - FLAM_C SINE Alu -3 140 8 2205 101 3 0 chr5 127107674 127107972 -72522178 - AluSx SINE Alu -13 299 1 1371 223 3 0 chr5 127108438 127108734 -72521416 + AluSx SINE Alu 2 298 -14 432 228 47 24 chr5 127108753 127108880 -72521270 + FLAM_C SINE Alu 8 137 -6 414 306 8 0 chr5 127108977 127109111 -72521039 + AluSq/x SINE Alu 3 137 -175 417 169 0 14 chr5 127109246 127109317 -72520833 + MER69 DNA AcHobo 2457 2526 0 198 0 0 0 chr5 127109418 127109440 -72520710 + (T)n Simple_repeat Simple_repeat 1 22 0 2107 108 17 0 chr5 127109494 127109790 -72520360 + AluSp SINE Alu 1 301 -12 1030 274 125 39 chr5 127109883 127110347 -72519803 + MLT1J LTR MaLR 1 504 -7 311 245 92 41 chr5 127110352 127110450 -72519700 + L1MD3 LINE L1 2111 2213 -3933 505 146 100 27 chr5 127110457 127110567 -72519583 + MER58B DNA MER1_type 191 308 -33 1057 108 0 0 chr5 127110567 127110706 -72519444 + AluSg SINE Alu 1 139 -171 355 111 0 0 chr5 127110710 127110764 -72519386 + Alu SINE Alu 247 300 0 2076 85 13 13 chr5 127110776 127111081 -72519069 + AluSq SINE Alu 1 305 -8 305 43 0 87 chr5 127111081 127111127 -72519023 + MER58B DNA MER1_type 300 341 0 520 259 39 57 chr5 127111135 127111230 -72518920 + L1MD3 LINE L1 2737 2832 -3314 2039 142 3 0 chr5 127111230 127111533 -72518617 + AluSx SINE Alu 1 304 -8 520 259 39 57 chr5 127111533 127111843 -72518307 + L1MD3 LINE L1 2832 3135 -3011 1740 179 0 7 chr5 127111851 127112158 -72517992 + AluJo SINE Alu 1 305 -7 348 121 0 15 chr5 127112201 127112267 -72517883 - MLT1H1 LTR MaLR 0 542 478 1975 121 6 25 chr5 127112267 127112581 -72517569 + AluSx SINE Alu 1 308 -4 472 155 28 0 chr5 127112590 127112661 -72517489 + AluJ/FLAM SINE Alu 1 73 -239 1472 168 18 31 chr5 127112733 127113019 -72517131 + AluJo SINE Alu 1 282 -30 216 97 0 0 chr5 127113022 127113053 -72517097 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 499 268 118 43 chr5 127113057 127113503 -72516647 - MLT1H1 LTR MaLR -53 502 1 1283 249 55 69 chr5 127113547 127113944 -72516206 + L1MD3 LINE L1 3464 3865 -4130 2177 119 0 0 chr5 127113944 127114255 -72515895 + AluSx SINE Alu 1 311 -1 1283 249 55 69 chr5 127114255 127114586 -72515564 + L1MD3 LINE L1 3865 4199 -3796 2040 100 0 38 chr5 127114586 127114905 -72515245 + AluSc SINE Alu 1 307 -2 1283 249 55 69 chr5 127114905 127115198 -72514952 + L1MD3 LINE L1 4199 4495 -3500 1576 199 3 3 chr5 127115198 127115499 -72514651 + AluJb SINE Alu 1 301 -11 1283 249 55 69 chr5 127115499 127115576 -72514574 + L1MD3 LINE L1 4495 7995 0 1917 127 47 3 chr5 127115705 127116004 -72514146 + AluSx SINE Alu 1 312 0 384 147 73 0 chr5 127116490 127116558 -72513592 - L2 LINE L2 0 3272 3200 2530 72 0 7 chr5 127118264 127118569 -72511581 + AluY SINE Alu 1 303 -8 1807 151 33 4 chr5 127118693 127118988 -72511162 + AluSx SINE Alu 3 305 0 362 283 59 59 chr5 127118988 127119175 -72510975 + L1MC/D LINE L1 5430 5616 -505 1198 133 0 0 chr5 127119175 127119340 -72510810 - AluSp SINE Alu -16 297 133 2319 105 0 0 chr5 127119381 127119675 -72510475 - AluSx SINE Alu -18 294 1 1054 133 7 0 chr5 127119677 127119820 -72510330 - AluSq/x SINE Alu -169 144 1 2311 66 16 26 chr5 127119884 127120188 -72509962 + AluSp SINE Alu 1 301 -12 1094 153 0 0 chr5 127120273 127120436 -72509714 + AluJb SINE Alu 141 303 -9 258 167 0 91 chr5 127120436 127120502 -72509648 + L1MC/D LINE L1 5696 5755 -2053 2428 86 0 7 chr5 127120606 127120909 -72509241 - AluSq SINE Alu -12 301 1 2033 60 42 46 chr5 127121142 127121452 -72508698 + AluY SINE Alu 1 309 0 197 333 0 43 chr5 127121883 127121976 -72508174 - L3 LINE CR1 -10 1567 1479 2079 122 13 7 chr5 127122101 127122457 -72507693 + AluSx SINE Alu 1 358 0 229 286 35 0 chr5 127123551 127123636 -72506514 + MIR SINE MIR 62 150 -58 * 380 284 113 40 chr5 127123630 127123718 -72506432 + MIR SINE MIR 13 93 -169 2481 81 7 0 chr5 127123718 127124028 -72506122 - AluSp SINE Alu -1 312 1 380 284 113 40 chr5 127124028 127124161 -72505989 + MIR SINE MIR 93 250 -12 950 263 131 44 chr5 127124168 127124280 -72505870 - MER34 LTR ERV1 -2 540 439 1360 126 195 8 chr5 127124280 127124526 -72505624 + AluJb SINE Alu 1 292 -10 950 263 131 44 chr5 127124526 127124865 -72505285 - MER34 LTR ERV1 -103 439 50 2288 112 3 0 chr5 127124873 127125176 -72504974 + AluSx SINE Alu 9 312 0 404 205 12 0 chr5 127125776 127125859 -72504291 - MER91A DNA MER1_type -105 91 8 216 0 0 0 chr5 127126587 127126611 -72503539 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2258 93 0 0 chr5 127126613 127126893 -72503257 - AluSc SINE Alu -27 282 3 259 291 11 74 chr5 127126969 127126981 -72503169 + L1ME LINE L1 5590 5601 -520 1932 152 10 10 chr5 127126981 127127290 -72502860 + AluSx SINE Alu 1 309 -3 259 291 11 74 chr5 127127290 127127466 -72502684 + L1ME LINE L1 5601 5766 -355 669 181 0 43 chr5 127127474 127127612 -72502538 + AluJo SINE Alu 5 136 -176 579 209 170 35 chr5 127127671 127127901 -72502249 + MIR SINE MIR 2 262 0 368 265 12 0 chr5 127127943 127128026 -72502124 - L2 LINE L2 0 3313 3230 2135 121 7 20 chr5 127128291 127128596 -72501554 + AluSx SINE Alu 1 301 -11 1866 62 0 4 chr5 127128596 127128821 -72501329 + AluY SINE Alu 1 224 -87 355 150 16 2 chr5 127128828 127128899 -72501251 - Alu SINE Alu -2 300 238 405 269 123 18 chr5 127129926 127130097 -72500053 - MIR SINE MIR -70 192 4 2047 154 52 113 chr5 127130257 127130393 -72499757 + MLT1D LTR MaLR 1 144 -361 815 119 0 0 chr5 127130393 127130511 -72499639 + FLAM_C SINE Alu 1 118 -15 2047 154 52 113 chr5 127130511 127130536 -72499614 + MLT1D LTR MaLR 144 169 -336 2298 104 0 7 chr5 127130536 127130876 -72499274 + AluY SINE Alu 1 311 0 2345 94 0 29 chr5 127130878 127131187 -72498963 + AluSp SINE Alu 2 301 -12 2047 154 52 113 chr5 127131187 127131559 -72498591 + MLT1D LTR MaLR 170 505 0 347 256 13 0 chr5 127132012 127132090 -72498060 + L2 LINE L2 3235 3313 0 303 380 0 0 chr5 127132160 127132302 -72497848 + (CA)n Simple_repeat Simple_repeat 1 142 0 499 292 22 6 chr5 127132755 127132962 -72497188 + MIR SINE MIR 3 211 -51 2088 145 6 3 chr5 127133033 127133344 -72496806 + AluJb SINE Alu 1 312 0 211 260 104 26 chr5 127133485 127133562 -72496588 + MIR SINE MIR 56 138 -70 1923 138 22 22 chr5 127134078 127134389 -72495761 + AluSx SINE Alu 1 311 -1 227 336 87 0 chr5 127135139 127135243 -72494907 + MIR SINE MIR 34 146 -62 1760 145 36 46 chr5 127136115 127136277 -72493873 - AluSx SINE Alu -6 306 147 2498 78 0 0 chr5 127136277 127136571 -72493579 - AluSg SINE Alu -16 294 1 1760 145 36 46 chr5 127136571 127136712 -72493438 - AluSx SINE Alu -165 147 6 468 224 18 85 chr5 127137197 127137238 -72492912 + MER5B DNA MER1_type 25 67 -111 2600 53 0 0 chr5 127137238 127137542 -72492608 + AluY SINE Alu 2 305 -6 468 224 18 85 chr5 127137542 127137665 -72492485 + MER5B DNA MER1_type 67 178 0 890 319 81 23 chr5 127138366 127138859 -72491291 + L2 LINE L2 2768 3287 -26 467 201 118 12 chr5 127138859 127139028 -72491122 - L1MD3 LINE L1 -1 7994 7808 1948 139 12 15 chr5 127139049 127139379 -72490771 - LTR39 LTR ERV1 -63 720 392 840 170 0 50 chr5 127139496 127139655 -72490495 - LTR39 LTR ERV1 -388 395 245 2516 93 0 0 chr5 127139882 127140192 -72489958 - AluY SINE Alu -1 310 1 691 123 0 18 chr5 127140192 127140297 -72489853 - AluJo/FRAM SINE Alu -15 297 193 4028 197 97 67 chr5 127140297 127140836 -72489314 - L1MC4 LINE L1 -302 7740 7219 2266 103 0 3 chr5 127140836 127141137 -72489013 - AluSg SINE Alu -10 300 1 4028 197 97 67 chr5 127141137 127141319 -72488831 - L1MC4 LINE L1 -823 7219 7044 1619 192 7 20 chr5 127141319 127141621 -72488529 + AluJb SINE Alu 6 303 -9 4028 197 97 67 chr5 127141621 127142151 -72487999 - L1MC4 LINE L1 -998 7044 6450 1092 256 92 26 chr5 127142154 127142580 -72487570 - MLT1C LTR MaLR 0 467 14 319 184 126 0 chr5 127142587 127142674 -72487476 - L1MC4a LINE L1 -1373 6435 6338 320 49 0 0 chr5 127142680 127142721 -72487429 - MER4E LTR ERV1 -72 694 654 575 222 74 119 chr5 127142725 127142851 -72487299 - L1MC4a LINE L1 -1458 6350 6220 2608 47 0 0 chr5 127142851 127143150 -72487000 - AluY SINE Alu -12 299 1 575 222 74 119 chr5 127143150 127143405 -72486745 - L1MC4a LINE L1 -1588 6220 5989 2462 76 0 3 chr5 127143405 127143706 -72486444 + AluSc SINE Alu 1 300 -9 575 222 74 119 chr5 127143706 127143769 -72486381 - L1MC4a LINE L1 -1819 5989 5925 1280 257 63 5 chr5 127143785 127143832 -72486318 - L1MC4a LINE L1 -225 6017 5974 1508 179 47 14 chr5 127143832 127144111 -72486039 - AluJo SINE Alu -24 288 1 1280 257 63 5 chr5 127144111 127144461 -72485689 - L1MC4a LINE L1 -268 5974 5584 1767 213 62 17 chr5 127144461 127144716 -72485434 - MLT1D LTR MaLR 0 505 263 1974 110 62 17 chr5 127144716 127144881 -72485269 - AluSx SINE Alu -8 304 119 2442 97 3 0 chr5 127144881 127145191 -72484959 - AluSx SINE Alu -1 311 1 1974 110 62 17 chr5 127145191 127145316 -72484834 - AluSx SINE Alu -193 119 1 1767 213 62 17 chr5 127145316 127145543 -72484607 - MLT1D LTR MaLR -242 263 1 2032 123 3 52 chr5 127145948 127146274 -72483876 + AluSx SINE Alu 1 310 -2 276 213 278 9 chr5 127146319 127146427 -72483723 + L3 LINE CR1 1376 1512 -65 2347 92 7 3 chr5 127146498 127146801 -72483349 - AluSp SINE Alu -9 304 1 1155 201 29 5 chr5 127146807 127147184 -72482966 - L1MD2 LINE L1 -15 6344 5910 884 184 5 32 chr5 127147184 127147369 -72482781 - MER3 DNA MER1_type -29 180 1 1296 233 30 41 chr5 127147458 127148033 -72482117 - MLT1F LTR MaLR 0 542 1 2219 103 0 0 chr5 127148427 127148738 -72481412 + AluSx SINE Alu 1 311 0 2475 92 0 0 chr5 127148789 127149092 -72481058 + AluSq SINE Alu 1 303 -10 328 254 57 94 chr5 127149235 127149479 -72480671 + L2 LINE L2 3000 3234 -38 786 233 9 51 chr5 127149676 127149891 -72480259 - MER20 DNA MER1_type 0 219 14 203 178 22 44 chr5 127149957 127150002 -72480148 + MIR SINE MIR 107 150 -58 2646 51 0 25 chr5 127150320 127150634 -72479516 - AluY SINE Alu -5 306 1 1657 141 19 22 chr5 127151001 127151271 -72478879 + AluJo SINE Alu 38 306 -6 247 262 24 71 chr5 127151290 127151393 -72478757 + L2 LINE L2 2491 2589 -725 2112 155 66 20 chr5 127151393 127151800 -72478350 + MSTB LTR MaLR 1 426 0 247 262 24 71 chr5 127151800 127151822 -72478328 + L2 LINE L2 2589 2610 -704 524 259 137 61 chr5 127151826 127152205 -72477945 - MLT1H1 LTR MaLR -102 453 46 2286 114 3 3 chr5 127152306 127152613 -72477537 - AluSx SINE Alu -5 307 1 2123 122 3 35 chr5 127152697 127153009 -72477141 - AluSx SINE Alu -10 302 1 734 247 196 0 chr5 127153009 127153269 -72476881 + L2 LINE L2 2997 3313 0 1501 90 21 43 chr5 127153328 127153361 -72476789 - MER61E LTR ERV1 -157 412 380 5440 53 14 1 chr5 127153361 127154075 -72476075 - L1PA8 LINE L1 0 6172 5450 1501 90 21 43 chr5 127154075 127154275 -72475875 - MER61E LTR ERV1 -189 380 184 1178 161 167 43 chr5 127154266 127154565 -72475585 + MSTD LTR MaLR 61 396 0 * 2331 89 7 10 chr5 127154681 127154984 -72475166 + AluSx SINE Alu 1 302 -10 335 321 18 55 chr5 127154994 127155159 -72474991 + MER5A DNA MER1_type 21 179 -10 2715 67 0 0 chr5 127155316 127155673 -72474477 + L1PA6 LINE L1 5798 6154 0 1739 135 0 99 chr5 127155673 127155985 -72474165 - AluJo SINE Alu -31 281 1 1303 70 0 0 chr5 127156018 127156214 -72473936 + AluY SINE Alu 134 311 0 1620 201 0 7 chr5 127157258 127157565 -72472585 - AluJo SINE Alu 0 305 1 609 158 12 133 chr5 127157565 127157730 -72472420 - MER65B LTR ERV1 -386 145 1 1253 236 69 102 chr5 127157765 127158273 -72471877 - MER77 LTR ERV1 -74 531 41 2666 121 0 45 chr5 127158394 127158840 -72471310 + MSTB LTR MaLR 1 426 0 2602 66 0 0 chr5 127158924 127159229 -72470921 - AluY SINE Alu -6 305 1 370 332 102 15 chr5 127159253 127159396 -72470754 - L2 LINE L2 0 3313 3184 2311 64 39 0 chr5 127159396 127159676 -72470474 - AluSp SINE Alu -22 291 1 370 332 102 15 chr5 127159676 127159866 -72470284 - L2 LINE L2 -129 3184 2951 272 343 103 0 chr5 127159900 127160046 -72470104 - MER91A DNA MER1_type -30 166 6 938 197 0 0 chr5 127160772 127160919 -72469231 + AluJo SINE Alu 1 147 -165 2565 64 0 22 chr5 127160922 127161235 -72468915 + AluSg SINE Alu 5 310 0 428 74 0 0 chr5 127161237 127161291 -72468859 - AluSq SINE Alu -108 205 152 886 195 18 0 chr5 127161308 127161472 -72468678 - MLT1A1 LTR MaLR 0 365 199 5383 104 31 47 chr5 127161473 127161979 -72468171 - L1PA16 LINE L1 0 6166 5653 2331 115 0 0 chr5 127161979 127162275 -72467875 - AluSg SINE Alu -14 296 1 5383 104 31 47 chr5 127162275 127162552 -72467598 - L1PA16 LINE L1 -513 5653 5373 2326 100 3 3 chr5 127162552 127162853 -72467297 - AluSx SINE Alu -11 301 1 5383 104 31 47 chr5 127162853 127162919 -72467231 - L1PA16 LINE L1 -793 5373 5307 2366 75 4 0 chr5 127162919 127163200 -72466950 - AluSx SINE Alu -30 282 1 5383 104 31 47 chr5 127163200 127163401 -72466749 - L1PA16 LINE L1 -859 5307 5131 1409 158 0 0 chr5 127163401 127163627 -72466523 - AluJo SINE Alu 0 307 82 2745 204 2 11 chr5 127163630 127164254 -72465896 - L1PA16 LINE L1 -1022 5124 4507 478 243 52 15 chr5 127164254 127164440 -72465710 - MLT1A1 LTR MaLR -139 226 2 1359 175 16 69 chr5 127164483 127164809 -72465341 - MLT1D LTR MaLR 0 505 206 647 143 0 122 chr5 127164853 127164921 -72465229 - MLT1D LTR MaLR -270 235 193 2386 106 0 0 chr5 127164921 127165224 -72464926 + AluSx SINE Alu 1 303 -9 647 143 0 122 chr5 127165224 127165302 -72464848 - MLT1D LTR MaLR -312 193 107 841 181 12 0 chr5 127165304 127165464 -72464686 + L1MA9 LINE L1 5907 6068 -244 472 160 0 20 chr5 127165461 127165561 -72464589 + L1 LINE L1 5235 5332 -814 * 921 158 0 0 chr5 127165562 127165695 -72464455 + AluSq/x SINE Alu 1 133 -180 637 103 0 0 chr5 127165695 127165792 -72464358 + L1P LINE L1 5317 5413 -753 * 1007 201 42 42 chr5 127165791 127166055 -72464095 + L1MA10 LINE L1 6064 6327 -7 376 200 0 0 chr5 127166078 127166143 -72464007 - MLT1D LTR MaLR -440 65 1 2300 99 0 0 chr5 127166240 127166543 -72463607 - AluSq SINE Alu 0 305 3 2036 131 3 0 chr5 127166880 127167163 -72462987 + AluSx SINE Alu 1 316 0 209 0 62 0 chr5 127167163 127167195 -72462955 + (CAAAA)n Simple_repeat Simple_repeat 2 180 0 2379 90 10 19 chr5 127167304 127167616 -72462534 + AluSg SINE Alu 1 309 -1 282 255 59 10 chr5 127168492 127168594 -72461556 - MLT1K LTR MaLR -34 554 448 260 221 12 128 chr5 127168749 127168835 -72461315 - MLT1K LTR MaLR -396 192 117 312 141 78 16 chr5 127169237 127169301 -72460849 - MLT1K LTR MaLR -342 246 179 740 217 0 0 chr5 127169420 127169572 -72460578 - FRAM SINE Alu -14 152 1 2379 96 7 0 chr5 127169596 127169899 -72460251 - AluSp SINE Alu -8 305 1 218 286 12 48 chr5 127169947 127170031 -72460119 - MIR SINE MIR -80 128 48 2061 139 0 19 chr5 127170084 127170400 -72459750 - AluSx SINE Alu -2 310 1 29 47 0 0 chr5 127172020 127172063 -72458087 + GC_rich Low_complexity Low_complexity 1 43 0 215 238 16 33 chr5 127172082 127172204 -72457946 + (CCG)n Simple_repeat Simple_repeat 3 122 0 309 329 36 22 chr5 127173038 127173175 -72456975 + MIR SINE MIR 110 248 -14 197 273 42 112 chr5 127173588 127173731 -72456419 + L2 LINE L2 3137 3269 -3 238 211 0 0 chr5 127173781 127173833 -72456317 + L2 LINE L2 3262 3313 0 1899 162 0 3 chr5 127173882 127174178 -72455972 - AluSx SINE Alu -17 295 1 2217 106 0 10 chr5 127175125 127175427 -72454723 - AluSg1 SINE Alu -10 299 1 246 320 140 22 chr5 127175476 127175654 -72454496 - MIR SINE MIR -17 245 47 596 286 65 14 chr5 127176074 127176291 -72453859 - MIR SINE MIR -24 238 11 203 161 0 0 chr5 127176732 127176763 -72453387 + (TG)n Simple_repeat Simple_repeat 1 31 0 317 299 10 0 chr5 127177047 127177144 -72453006 - LTR33 LTR ERVL -2 519 422 1072 200 85 22 chr5 127177174 127177444 -72452706 - LTR33 LTR ERVL -230 291 5 197 281 101 11 chr5 127177461 127177550 -72452600 - MIR SINE MIR -4 258 162 865 118 0 22 chr5 127177698 127177833 -72452317 - FLAM_C SINE Alu 0 133 2 209 242 16 16 chr5 127178014 127178076 -72452074 + MER5A DNA MER1_type 123 184 -5 1236 101 6 12 chr5 127178318 127178486 -72451664 - AluSg/x SINE Alu -22 290 124 2451 93 0 10 chr5 127178768 127179081 -72451069 - AluSp SINE Alu -3 310 1 1922 116 26 52 chr5 127179127 127179437 -72450713 - AluSx SINE Alu 0 312 11 684 282 109 26 chr5 127179443 127179783 -72450367 - L1ME LINE L1 -298 5823 5456 242 191 0 0 chr5 127180136 127180183 -72449967 - L2 LINE L2 0 3313 3267 324 87 0 0 chr5 127183322 127183368 -72446782 + L2 LINE L2 3267 3312 -1 240 250 29 0 chr5 127183529 127183597 -72446553 - L2 LINE L2 -1 3312 3243 2401 106 3 0 chr5 127184597 127184908 -72445242 - AluSp SINE Alu -1 312 1 613 121 0 81 chr5 127184910 127185034 -72445116 - L1PB4 LINE L1 -2 6154 6041 230 336 72 16 chr5 127186230 127186355 -72443795 - L2 LINE L2 -5 3267 3136 2320 96 7 3 chr5 127186901 127187202 -72442948 + AluSp SINE Alu 1 302 -11 2224 128 0 0 chr5 127187203 127187501 -72442649 + AluSx SINE Alu 1 298 -14 224 291 39 48 chr5 127187611 127187714 -72442436 - L2 LINE L2 -9 3304 3203 2079 88 0 28 chr5 127188068 127188351 -72441799 - AluSg SINE Alu -6 304 30 1454 140 5 0 chr5 127188351 127188558 -72441592 - AluSx SINE Alu -104 208 1 3721 217 99 27 chr5 127188578 127189211 -72440939 - L1MC4a LINE L1 0 7808 7222 1826 141 0 0 chr5 127189211 127189467 -72440683 - AluSx SINE Alu -56 256 1 3721 217 99 27 chr5 127189467 127189478 -72440672 - L1MC4a LINE L1 -586 7222 7213 1928 156 3 10 chr5 127189478 127189786 -72440364 - AluJb SINE Alu -6 306 1 3721 217 99 27 chr5 127189786 127190177 -72439973 - L1MC4a LINE L1 -595 7213 6690 2149 116 31 0 chr5 127190177 127190469 -72439681 + AluSg SINE Alu 1 301 -9 3721 217 99 27 chr5 127190469 127190502 -72439648 - L1MC4a LINE L1 -1118 6690 6661 2080 124 38 0 chr5 127191193 127191483 -72438667 - AluSx SINE Alu -11 301 1 925 168 78 6 chr5 127191606 127191785 -72438365 - LTR47A LTR ERVL 0 452 261 2068 142 7 10 chr5 127191900 127192209 -72437941 - AluSx SINE Alu -4 308 1 823 140 0 0 chr5 127192279 127192393 -72437757 + AluJb SINE Alu 2 115 -197 414 0 0 0 chr5 127192393 127192439 -72437711 + (CA)n Simple_repeat Simple_repeat 2 47 0 1850 153 107 28 chr5 127192463 127192498 -72437652 - MSTA LTR MaLR -5 423 392 1842 159 3 20 chr5 127192498 127192800 -72437350 + AluJb SINE Alu 1 297 -15 1850 153 107 28 chr5 127192800 127193156 -72436994 - MSTA LTR MaLR -36 392 1 561 249 26 74 chr5 127193290 127193584 -72436566 - L1MC5 LINE L1 -26 7935 7659 2423 88 7 0 chr5 127193584 127193889 -72436261 - AluSp SINE Alu -4 309 3 561 249 26 74 chr5 127193889 127193944 -72436206 - L1MC5 LINE L1 -302 7659 7603 2351 113 0 0 chr5 127193951 127194251 -72435899 - AluSq SINE Alu -13 300 1 2445 84 0 0 chr5 127194328 127194627 -72435523 - AluSg SINE Alu -11 299 1 610 196 86 72 chr5 127194661 127194893 -72435257 - L1MC5 LINE L1 -1003 7039 6714 21 0 0 0 chr5 127196206 127196227 -72433923 + AT_rich Low_complexity Low_complexity 1 21 0 460 235 96 27 chr5 127196945 127197131 -72433019 + L1ME1 LINE L1 5938 6130 -34 2259 106 0 3 chr5 127197132 127197434 -72432716 + AluSg SINE Alu 1 301 -9 2454 187 49 8 chr5 127197437 127197972 -72432178 + L1MC4a LINE L1 7089 7645 -163 658 113 0 38 chr5 127197973 127198079 -72432071 + FRAM SINE Alu 57 158 -18 1979 146 0 0 chr5 127198079 127198354 -72431796 + AluY SINE Alu 1 275 -36 255 61 0 0 chr5 127198360 127198393 -72431757 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 1746 94 8 37 chr5 127199392 127199636 -72430514 + AluSg/x SINE Alu 73 309 -1 180 318 0 32 chr5 127199697 127199760 -72430390 - MIR SINE MIR -21 241 181 1570 171 58 14 chr5 127199800 127200092 -72430058 - AluJo SINE Alu -7 305 1 2202 112 3 7 chr5 127200103 127200406 -72429744 - AluSq SINE Alu -11 302 1 308 286 95 9 chr5 127200407 127200512 -72429638 - MIR SINE MIR -112 150 37 485 263 219 0 chr5 127203237 127203442 -72426708 + MIR SINE MIR 8 257 -5 297 276 97 21 chr5 127203728 127203873 -72426277 + MIR SINE MIR 87 242 -20 2602 66 0 0 chr5 127204518 127204823 -72425327 + AluY SINE Alu 1 305 -6 2656 123 0 45 chr5 127204907 127205353 -72424797 - MSTB LTR MaLR 0 426 1 1253 236 69 102 chr5 127205474 127205982 -72424168 + MER77 LTR ERV1 41 531 -74 609 158 12 133 chr5 127206017 127206182 -72423968 + MER65B LTR ERV1 1 145 -386 1621 201 0 7 chr5 127206182 127206489 -72423661 + AluJo SINE Alu 1 305 0 1303 70 0 0 chr5 127207533 127207729 -72422421 - AluY SINE Alu 0 311 134 1673 141 0 99 chr5 127207762 127208074 -72422076 + AluJo SINE Alu 1 281 -31 2715 67 0 0 chr5 127208074 127208431 -72421719 - L1PA6 LINE L1 0 6154 5798 335 321 18 55 chr5 127208588 127208753 -72421397 - MER5A DNA MER1_type -10 179 21 2323 89 7 10 chr5 127208763 127209065 -72421085 - AluSx SINE Alu -11 301 1 1178 161 167 43 chr5 127209181 127209480 -72420670 - MSTD LTR MaLR 0 396 61 * 1501 90 21 43 chr5 127209471 127209671 -72420479 + MER61E LTR ERV1 184 380 -189 5440 53 14 1 chr5 127209671 127210385 -72419765 + L1PA8 LINE L1 5450 6172 0 1501 90 21 43 chr5 127210385 127210418 -72419732 + MER61E LTR ERV1 380 412 -157 734 247 196 0 chr5 127210477 127210737 -72419413 - L2 LINE L2 0 3313 2997 2123 122 3 35 chr5 127210737 127211049 -72419101 + AluSx SINE Alu 1 302 -10 1637 159 3 27 chr5 127211133 127211429 -72418721 + AluSq SINE Alu 1 289 -24 459 191 0 0 chr5 127211572 127211640 -72418510 + G-rich Low_complexity Low_complexity 1 68 0 483 235 20 13 chr5 127211835 127211984 -72418166 + MER103 DNA DNA 4 153 -13 3348 182 47 21 chr5 127212495 127213242 -72416908 - LTR1B LTR ERV1 0 785 1 1812 183 14 14 chr5 127213370 127213725 -72416425 - MER4D LTR ERV1 0 903 549 1626 154 18 7 chr5 127213758 127214037 -72416113 - MER49 LTR ERV1 -641 282 1 21 36 0 0 chr5 127214558 127214586 -72415564 + AT_rich Low_complexity Low_complexity 1 28 0 208 338 0 0 chr5 127214639 127214710 -72415440 - MIR3 SINE MIR -37 171 101 727 194 0 17 chr5 127215261 127215441 -72414709 + GA-rich Low_complexity Low_complexity 1 177 0 1350 97 117 5 chr5 127216675 127216881 -72413269 + MER30 DNA MER1_type 1 229 -1 590 297 183 22 chr5 127217430 127217922 -72412228 + L2 LINE L2 2077 2647 -667 294 312 68 120 chr5 127218270 127218594 -72411556 + L2 LINE L2 2966 3272 0 545 255 90 87 chr5 127219275 127219585 -72410565 + MLT1K LTR MaLR 278 588 0 358 225 0 0 chr5 127220023 127220094 -72410056 - L2 LINE L2 -1 3312 3242 302 281 10 10 chr5 127220164 127220260 -72409890 + MLT2F LTR ERVL 47 142 -521 2237 53 4 0 chr5 127221048 127221310 -72408840 + AluY SINE Alu 45 307 -4 2310 106 3 3 chr5 127225426 127225729 -72404421 + AluSx SINE Alu 1 303 -9 964 243 137 53 chr5 127225913 127226147 -72404003 - L2 LINE L2 -392 2922 2709 1835 244 82 19 chr5 127226147 127226736 -72403414 - MLT1E2 LTR MaLR 0 626 1 964 243 137 53 chr5 127226736 127226896 -72403254 - L2 LINE L2 -605 2709 2495 265 318 102 17 chr5 127227326 127227502 -72402648 + MIR SINE MIR 16 206 -56 202 130 22 43 chr5 127227699 127227745 -72402405 + (TTA)n Simple_repeat Simple_repeat 3 47 0 222 304 152 3 chr5 127227860 127228019 -72402131 + MIR SINE MIR 45 221 -41 195 244 50 119 chr5 127228416 127228478 -72401672 + L2 LINE L2 3061 3126 -187 2026 65 35 0 chr5 127228478 127228739 -72401411 - AluSx SINE Alu -14 298 29 195 244 50 119 chr5 127228739 127228877 -72401273 + L2 LINE L2 3126 3247 -66 758 236 12 12 chr5 127229647 127229812 -72400338 - MIR SINE MIR -86 176 12 1908 245 33 91 chr5 127229923 127230603 -72399547 - L1ME3A LINE L1 0 6170 5563 2140 134 0 0 chr5 127230603 127230893 -72399257 - AluSx SINE Alu -22 290 1 1908 245 33 91 chr5 127230893 127231204 -72398946 - L1ME3A LINE L1 -607 5563 5236 1937 90 0 0 chr5 127231363 127231597 -72398553 - AluSq SINE Alu -76 237 4 1120 162 0 22 chr5 127231608 127231787 -72398363 - FAM SINE Alu 0 175 1 364 265 20 0 chr5 127232659 127232757 -72397393 - U13 snRNA snRNA -1 103 4 26 30 0 0 chr5 127232868 127232901 -72397249 + AT_rich Low_complexity Low_complexity 1 33 0 346 248 30 10 chr5 127233569 127233670 -72396480 + L1P LINE L1 546 648 -5498 1453 173 84 31 chr5 127233836 127234194 -72395956 - MLT1C LTR MaLR -83 384 8 400 279 36 9 chr5 127234279 127234390 -72395760 - L2 LINE L2 0 3313 3200 182 195 24 24 chr5 127234996 127235037 -72395113 + L2 LINE L2 3016 3056 -216 2066 190 34 19 chr5 127235228 127235697 -72394453 + MER34B LTR ERV1 84 559 -6 855 235 13 29 chr5 127235933 127235979 -72394171 + LTR26 LTR ERV1 1 46 -557 1705 165 72 0 chr5 127235979 127236258 -72393892 + AluSx SINE Alu 1 299 -13 855 235 13 29 chr5 127236258 127236449 -72393701 + LTR26 LTR ERV1 46 234 -369 319 279 205 33 chr5 127238732 127238854 -72391296 + MIR SINE MIR 2 144 -118 531 248 6 43 chr5 127238856 127239017 -72391133 + MLT1E LTR MaLR 4 158 -435 1779 91 25 0 chr5 127239039 127239281 -72390869 - SVA Other Other -2 1384 1137 209 328 31 16 chr5 127239401 127239465 -72390685 - L2 LINE L2 -34 3238 3174 488 235 121 74 chr5 127239872 127240194 -72389956 + MLT1J2 LTR MaLR 82 442 -4 4802 122 63 37 chr5 127242060 127243363 -72386787 - SVA Other Other -518 1004 32 246 306 35 0 chr5 127243524 127243609 -72386541 + MIR SINE MIR 127 214 -48 298 312 22 43 chr5 127244316 127244454 -72385696 + MIR3 SINE MIR 35 169 -39 358 167 62 31 chr5 127245900 127245996 -72384154 + L1MB2 LINE L1 6069 6167 -4 228 135 0 0 chr5 127246828 127246865 -72383285 + (CA)n Simple_repeat Simple_repeat 1 37 0 409 322 46 17 chr5 127247021 127247195 -72382955 + L2 LINE L2 3073 3251 -21 222 139 0 0 chr5 127247856 127247892 -72382258 - L2 LINE L2 -100 3172 3137 1675 144 8 0 chr5 127249328 127249585 -72380565 + AluJb SINE Alu 44 302 -10 267 260 137 14 chr5 127249620 127249693 -72380457 - MER5A DNA MER1_type 0 189 108 4041 148 11 37 chr5 127250258 127250989 -72379161 + MER50 LTR ERV1 1 712 -22 222 330 91 0 chr5 127251050 127251138 -72379012 - L2 LINE L2 -52 3220 3125 437 173 45 23 chr5 127251165 127251298 -72378852 - MLT1C LTR MaLR -13 454 319 1667 57 33 0 chr5 127251434 127251646 -72378504 + L1PA8 LINE L1 5954 6172 0 801 239 204 0 chr5 127251738 127251998 -72378152 - L2 LINE L2 0 3313 3001 2396 93 10 3 chr5 127251998 127252308 -72377842 + AluSx SINE Alu 1 312 0 431 281 25 56 chr5 127253008 127253293 -72376857 - L1MC5 LINE L1 -26 7935 7660 2330 101 7 0 chr5 127253302 127253609 -72376541 - AluSp SINE Alu -4 309 1 331 286 95 9 chr5 127253610 127253715 -72376435 - MIR SINE MIR -112 150 37 722 253 83 63 chr5 127254407 127254865 -72375285 + HAL1 LINE L1 127 593 -1914 572 206 30 142 chr5 127254982 127255278 -72374872 + MLT1C LTR MaLR 53 315 -75 305 182 162 101 chr5 127255304 127255452 -72374698 + HAL1 LINE L1 686 842 -1665 1194 134 5 38 chr5 127257410 127257596 -72372554 + AluJb SINE Alu 111 290 -22 1227 206 0 25 chr5 127257596 127257834 -72372316 + AluJo SINE Alu 80 311 -1 493 211 9 0 chr5 127257834 127257943 -72372207 - MLT2B2 LTR ERVL -405 110 1 312 172 31 0 chr5 127259250 127259314 -72370836 - MLT1K LTR MaLR -15 573 508 468 51 15 4 chr5 127259343 127259415 -72370735 + MSTA LTR MaLR 1 75 -357 696 273 44 31 chr5 127259611 127259838 -72370312 + ERVL LTR ERVL 4764 4993 -771 230 54 108 0 chr5 127259864 127259901 -72370249 - MSTA LTR MaLR 0 428 388 2373 108 0 0 chr5 127259901 127260198 -72369952 + AluSq SINE Alu 1 297 -16 225 274 27 27 chr5 127260252 127260325 -72369825 - L2 LINE L2 -43 3229 3157 213 324 126 9 chr5 127261209 127261320 -72368830 - L2 LINE L2 -5 3267 3144 248 176 270 0 chr5 127262900 127262974 -72367176 + L1MDa LINE L1 2546 2639 -3901 277 167 0 0 chr5 127262974 127263028 -72367122 - Alu SINE Alu -2 300 247 2824 150 45 26 chr5 127263029 127263172 -72366978 + L1MD1 LINE L1 5686 5825 -417 2053 117 17 20 chr5 127263172 127263472 -72366678 + AluSg SINE Alu 11 309 -1 2824 150 45 26 chr5 127263472 127263867 -72366283 + L1MD1 LINE L1 5825 6234 -8 1609 218 136 2 chr5 127263899 127264325 -72365825 + L2 LINE L2 2376 2858 -456 260 213 131 0 chr5 127264327 127264388 -72365762 + L2 LINE L2 3237 3305 -8 677 211 173 31 chr5 127264930 127265228 -72364922 - MLT1C LTR MaLR -60 433 97 875 279 98 37 chr5 127265505 127266024 -72364126 + L1MC4 LINE L1 6806 7356 -686 2451 93 0 10 chr5 127266372 127266685 -72363465 - AluSp SINE Alu -3 310 1 1990 116 25 50 chr5 127266731 127267051 -72363099 - AluSx SINE Alu 0 312 1 286 296 56 8 chr5 127267453 127267578 -72362572 - MIR SINE MIR -73 189 59 2001 111 37 24 chr5 127267891 127268188 -72361962 - AluSx SINE Alu -6 306 6 257 149 0 40 chr5 127268847 127268921 -72361229 - L1ME4a LINE L1 -3 6118 6048 231 257 0 0 chr5 127272291 127272365 -72357785 + (TATG)n Simple_repeat Simple_repeat 1 74 0 2197 90 10 17 chr5 127273194 127273541 -72356609 - AluSg SINE Alu 0 310 1 1115 128 0 124 chr5 127273543 127273607 -72356543 - L1P LINE L1 -783 5363 5293 2366 75 4 0 chr5 127273607 127273888 -72356262 - AluSx SINE Alu -30 282 1 1115 128 0 124 chr5 127273888 127274089 -72356061 - L1P LINE L1 -853 5293 5131 1409 158 0 0 chr5 127274089 127274315 -72355835 - AluJo SINE Alu 0 307 82 1999 193 2 9 chr5 127274318 127274742 -72355408 - L1P LINE L1 -1022 5124 4704 555 168 0 0 chr5 127275353 127275448 -72354702 - FLAM_C SINE Alu -9 134 40 304 330 10 0 chr5 127275454 127275557 -72354593 - MIR SINE MIR -122 140 37 201 246 18 53 chr5 127275733 127275790 -72354360 - L2 LINE L2 -5 3267 3213 471 282 103 11 chr5 127275993 127276167 -72353983 - MIR SINE MIR -71 191 2 372 43 0 0 chr5 127276764 127276810 -72353340 + (TG)n Simple_repeat Simple_repeat 1 46 0 1377 219 35 27 chr5 127277597 127277967 -72352183 - MLT1A2 LTR MaLR 0 374 2 205 243 0 0 chr5 127279077 127279114 -72351036 + polypurine Low_complexity Low_complexity 2 38 0 851 251 76 38 chr5 127279737 127280079 -72350071 + MLT1B LTR MaLR 1 355 -35 2241 103 10 3 chr5 127280955 127281246 -72348904 - AluSx SINE Alu -19 293 1 590 213 73 13 chr5 127281256 127281406 -72348744 + L2 LINE L2 3155 3313 0 721 158 93 0 chr5 127281730 127281869 -72348281 + MSTD LTR MaLR 245 396 0 2254 99 3 13 chr5 127281985 127282289 -72347861 + AluSx SINE Alu 1 301 -11 335 321 18 55 chr5 127282299 127282464 -72347686 + MER5A DNA MER1_type 21 179 -10 2810 53 0 0 chr5 127282621 127282978 -72347172 + L1PA6 LINE L1 5798 6154 0 1704 127 0 105 chr5 127282978 127283292 -72346858 - AluJb SINE Alu -31 281 1 1303 70 0 0 chr5 127283325 127283521 -72346629 + AluY SINE Alu 134 311 0 827 169 15 0 chr5 127284773 127284909 -72345241 + FRAM SINE Alu 20 157 -19 2136 115 34 0 chr5 127285226 127285522 -72344628 + AluSx SINE Alu 1 306 -6 1388 187 114 0 chr5 127285522 127285811 -72344339 + MLT1D LTR MaLR 184 505 0 307 336 18 0 chr5 127285912 127286022 -72344128 - MIR SINE MIR -5 257 146 1323 163 249 6 chr5 127286029 127286342 -72343808 - MLT1F1 LTR MaLR -1 566 178 1674 151 67 25 chr5 127286390 127286674 -72343476 + AluJo SINE Alu 1 296 -16 294 95 0 0 chr5 127286678 127286720 -72343430 + (TTCC)n Simple_repeat Simple_repeat 4 45 0 2112 155 66 20 chr5 127286887 127287294 -72342856 - MSTB LTR MaLR 0 426 1 240 287 30 30 chr5 127287296 127287397 -72342753 - L2 LINE L2 -723 2591 2491 1955 137 16 19 chr5 127287416 127287723 -72342427 - AluJb SINE Alu -6 306 1 1147 115 16 22 chr5 127287723 127287905 -72342245 + LTR32 LTR ERVL 291 471 0 1598 146 19 84 chr5 127288539 127288848 -72341302 - AluJo SINE Alu -17 295 7 324 268 61 6 chr5 127288857 127289021 -72341129 - L1MC3 LINE L1 -830 6955 6783 311 194 14 14 chr5 127289944 127290016 -72340134 - MLT1B LTR MaLR 0 390 319 1208 255 91 6 chr5 127290069 127290430 -72339720 - MLT1C LTR MaLR -75 392 1 480 311 126 69 chr5 127290531 127291065 -72339085 - L1M4 LINE L1 -2770 3376 2789 396 275 123 18 chr5 127292506 127292677 -72337473 - MIR SINE MIR -70 192 4 554 119 8 127 chr5 127292837 127292971 -72337179 + MLT1D LTR MaLR 1 118 -387 815 119 0 0 chr5 127292973 127293091 -72337059 + FLAM_C SINE Alu 1 118 -15 2180 113 0 13 chr5 127293116 127293426 -72336724 + AluY SINE Alu 1 306 -5 2365 90 3 0 chr5 127293460 127293761 -72336389 + AluSx SINE Alu 2 303 -9 362 121 15 0 chr5 127293821 127293887 -72336263 + CT-rich Low_complexity Low_complexity 1 67 0 1508 179 47 14 chr5 127293887 127294166 -72335984 - AluJo SINE Alu -24 288 1 1280 250 55 0 chr5 127294167 127294515 -72335635 - L1MC3 LINE L1 -1858 5950 5584 897 212 43 22 chr5 127294516 127294747 -72335403 - MLT1D LTR MaLR 0 505 270 271 284 83 28 chr5 127295325 127295434 -72334716 - L2 LINE L2 -165 3107 2993 660 205 8 0 chr5 127297262 127297389 -72332761 + MER33 DNA MER1_type 2 129 -195 2146 144 0 0 chr5 127297955 127298261 -72331889 - AluSx SINE Alu -6 306 1 1580 150 15 142 chr5 127298314 127298531 -72331619 + MER57A LTR ERV1 1 131 -272 2262 108 16 0 chr5 127298531 127298838 -72331312 + AluSq SINE Alu 1 312 -1 1580 150 15 142 chr5 127298838 127299079 -72331071 + MER57A LTR ERV1 131 401 -2 709 285 105 38 chr5 127299284 127299656 -72330494 - MLT1K LTR MaLR -4 584 188 1200 302 203 10 chr5 127299694 127300687 -72329463 + L2 LINE L2 2033 3239 -74 2103 140 0 34 chr5 127301104 127301426 -72328724 - AluSx SINE Alu -1 311 1 472 160 0 20 chr5 127301427 127301527 -72328623 - L1 LINE L1 -814 5332 5235 * 841 181 12 0 chr5 127301524 127301684 -72328466 - L1MA9 LINE L1 -244 6068 5907 405 179 0 26 chr5 127301686 127301764 -72328386 + MLT1D LTR MaLR 107 182 -323 2166 129 3 3 chr5 127301764 127302067 -72328083 - AluSx SINE Alu -9 303 1 1907 147 3 38 chr5 127302151 127302464 -72327686 - AluSx SINE Alu -10 302 1 200 279 186 0 chr5 127304114 127304200 -72325950 - MER5A DNA MER1_type -53 136 35 1640 158 0 29 chr5 127304515 127304794 -72325356 + AluJb SINE Alu 33 303 -9 2214 106 11 0 chr5 127305647 127305930 -72324220 - AluSq SINE Alu -26 287 2 327 340 101 15 chr5 127305963 127306098 -72324052 - L2 LINE L2 -9 3304 3182 2301 68 39 0 chr5 127306098 127306378 -72323772 - AluSp SINE Alu -22 291 1 327 340 101 15 chr5 127306378 127306568 -72323582 - L2 LINE L2 -131 3182 2951 272 343 103 0 chr5 127306602 127306748 -72323402 - MER91A DNA MER1_type -30 166 6 2085 177 23 2 chr5 127307507 127307903 -72322247 + L1MC3 LINE L1 7218 7621 -164 973 39 78 0 chr5 127307992 127308121 -72322029 + MER85 DNA T2_type 1 139 0 10055 88 4 8 chr5 127308385 127309848 -72320302 + L1P LINE L1 962 2419 -3727 278 270 61 35 chr5 127312778 127312893 -72317257 + L2 LINE L2 3167 3284 -29 521 284 70 42 chr5 127313413 127313606 -72316544 - MIR SINE MIR -28 234 33 2469 93 0 3 chr5 127313606 127313916 -72316234 - AluSq SINE Alu -4 309 1 521 284 70 42 chr5 127313916 127313937 -72316213 - MIR SINE MIR -229 33 14 242 235 176 0 chr5 127315275 127315343 -72314807 - MIR SINE MIR -6 256 177 1012 270 65 48 chr5 127316036 127316451 -72313699 - MLT1J2 LTR MaLR -8 442 21 2223 107 10 0 chr5 127317513 127317803 -72312347 - AluSx SINE Alu -19 293 1 320 257 71 21 chr5 127318043 127318183 -72311967 - L2 LINE L2 -177 3095 2949 2359 66 20 16 chr5 127318503 127318807 -72311343 - AluY SINE Alu -6 305 1 27 29 0 0 chr5 127318897 127318931 -72311219 + AT_rich Low_complexity Low_complexity 1 34 0 366 329 30 6 chr5 127320042 127320206 -72309944 - L2 LINE L2 -1 3271 3104 2918 167 17 60 chr5 127320618 127321257 -72308893 - LTR9 LTR ERV1 0 612 1 1910 288 69 31 chr5 127321856 127323057 -72307093 + L2 LINE L2 2077 3305 -8 620 224 82 0 chr5 127323508 127323678 -72306472 - MER33 DNA MER1_type -133 191 8 296 273 172 10 chr5 127325597 127325696 -72304454 + MER5B DNA MER1_type 62 176 -2 339 291 40 47 chr5 127326179 127326327 -72303823 - MER5A DNA MER1_type -4 185 39 * 368 294 13 52 chr5 127326195 127326348 -72303802 + MER5A DNA MER1_type 37 183 -6 418 257 155 34 chr5 127327708 127327914 -72302236 - MIR SINE MIR -12 250 20 554 220 105 26 chr5 127327937 127328128 -72302022 - LTR33A LTR ERVL 0 523 318 251 243 185 53 chr5 127328223 127328412 -72301738 - LTR50 LTR ERVL -564 231 18 419 317 70 5 chr5 127328426 127328612 -72301538 - MIR SINE MIR -36 226 29 303 28 0 0 chr5 127329535 127329571 -72300579 + (TA)n Simple_repeat Simple_repeat 1 36 0 201 147 0 0 chr5 127329571 127329605 -72300545 + (CA)n Simple_repeat Simple_repeat 1 34 0 445 310 39 13 chr5 127330519 127330674 -72299476 - MIR SINE MIR -72 190 32 459 277 15 15 chr5 127332035 127332165 -72297985 - MER94 DNA DNA -4 130 1 237 254 0 0 chr5 127333554 127333617 -72296533 - L2 LINE L2 -68 3245 3183 223 203 0 34 chr5 127333654 127333713 -72296437 - L2 LINE L2 -131 3182 3126 234 264 62 47 chr5 127334259 127334388 -72295762 + MIR3 SINE MIR 43 173 -35 1734 182 72 32 chr5 127334626 127335018 -72295132 - MER21B LTR ERV1 -1 862 478 752 161 63 7 chr5 127335029 127335172 -72294978 - MER21B LTR ERV1 -710 153 3 237 303 72 46 chr5 127335662 127335814 -72294336 - MIR3 SINE MIR -19 189 34 1192 213 160 55 chr5 127336952 127337403 -72292747 - MLT1D LTR MaLR -2 503 6 205 283 0 17 chr5 127337432 127337492 -72292658 + MIR SINE MIR 20 78 -184 317 142 6 32 chr5 127388324 127388394 -72241756 - MLT2D LTR ERVL 0 520 383 719 200 56 116 chr5 127388429 127388714 -72241436 - MLT2D LTR ERVL -48 366 99 1936 139 3 27 chr5 127388718 127389013 -72241137 + AluJb SINE Alu 6 293 -19 1226 197 0 26 chr5 127389015 127389248 -72240902 + AluJo SINE Alu 85 311 -1 493 211 9 0 chr5 127389248 127389357 -72240793 - MLT2B1 LTR ERVL -410 110 1 21 0 0 0 chr5 127391598 127391619 -72238531 + AT_rich Low_complexity Low_complexity 1 21 0 415 218 98 36 chr5 127392342 127392525 -72237625 + L1ME1 LINE L1 5941 6131 -31 1633 105 0 21 chr5 127392525 127392764 -72237386 + AluSg SINE Alu 1 234 -76 3898 133 27 10 chr5 127393818 127394442 -72235708 - MER41B LTR ERV1 0 635 1 270 292 92 8 chr5 127394618 127394738 -72235412 - MIR SINE MIR -117 145 16 405 229 299 6 chr5 127394999 127395156 -72234994 - MIR SINE MIR -58 204 2 383 208 50 20 chr5 127395166 127395267 -72234883 + MER34 LTR ERV1 11 114 -428 2132 177 36 19 chr5 127395428 127395896 -72234254 + MER34B LTR ERV1 84 559 -6 312 172 31 0 chr5 127396626 127396690 -72233460 - MLT1K LTR MaLR -15 573 508 761 258 88 46 chr5 127396690 127396719 -72233431 - ERVL LTR ERVL -706 5058 5032 2626 107 30 57 chr5 127396719 127397121 -72233029 + MSTA LTR MaLR 1 392 -36 2415 101 0 3 chr5 127397121 127397427 -72232723 - AluSq SINE Alu -8 305 1 2626 107 30 57 chr5 127397427 127397464 -72232686 + MSTA LTR MaLR 392 428 0 761 258 88 46 chr5 127397464 127397717 -72232433 - ERVL LTR ERVL -732 5032 4764 1034 290 60 32 chr5 127397796 127398265 -72231885 - ERVL LTR ERVL -3518 2246 1765 297 0 0 0 chr5 127398807 127398824 -72231326 + (TG)n Simple_repeat Simple_repeat 1 50 0 297 0 0 0 chr5 127398824 127398857 -72231293 + (TG)n Simple_repeat Simple_repeat 2 34 0 782 169 0 10 chr5 127398967 127399207 -72230943 + AluJ SINE Alu 21 312 0 2086 110 39 0 chr5 127399231 127399512 -72230638 + AluSq SINE Alu 1 292 -21 258 255 181 0 chr5 127399543 127399637 -72230513 + MIR SINE MIR 152 262 0 234 0 0 0 chr5 127399976 127400002 -72230148 + (TTGGGG)n Simple_repeat Simple_repeat 1 26 0 459 165 13 0 chr5 127400971 127401050 -72229100 - MER33 DNA MER1_type -244 80 1 1859 244 72 42 chr5 127401400 127402012 -72228138 - L2 LINE L2 -10 3303 2648 1835 244 82 19 chr5 127402012 127402601 -72227549 - MLT1E2 LTR MaLR 0 626 1 1859 244 72 42 chr5 127402601 127402885 -72227265 - L2 LINE L2 -665 2648 2374 25 0 0 0 chr5 127403261 127403286 -72226864 + AT_rich Low_complexity Low_complexity 1 25 0 545 70 0 0 chr5 127403338 127403409 -72226741 + LTR32 LTR ERVL 18 88 -383 1262 141 27 69 chr5 127403420 127403498 -72226652 + LTR32 LTR ERVL 221 301 -170 2347 113 0 0 chr5 127403498 127403799 -72226351 - AluSx SINE Alu -11 301 1 1262 141 27 69 chr5 127403799 127403982 -72226168 + LTR32 LTR ERVL 301 471 0 1603 142 19 85 chr5 127404616 127404932 -72225218 - AluJo SINE Alu -17 295 1 304 216 0 0 chr5 127405000 127405051 -72225099 + L1MC4 LINE L1 6653 6703 -1339 1178 249 148 30 chr5 127405109 127405710 -72224440 - L2 LINE L2 -8 3305 2636 298 312 22 43 chr5 127406595 127406733 -72223417 + MIR3 SINE MIR 35 169 -39 1243 210 72 111 chr5 127407920 127408406 -72221744 - MLT1C LTR MaLR 0 467 1 494 320 154 52 chr5 127408507 127409041 -72221109 - L1M4 LINE L1 -2770 3376 2789 1316 222 35 27 chr5 127410034 127410404 -72219746 - MLT1A2 LTR MaLR 0 374 2 205 243 0 0 chr5 127411518 127411555 -72218595 + polypurine Low_complexity Low_complexity 2 38 0 247 272 149 0 chr5 127411862 127411976 -72218174 + MIR SINE MIR 22 152 -110 635 184 81 15 chr5 127412166 127412302 -72217848 - L2 LINE L2 0 3313 3169 2230 103 10 3 chr5 127412326 127412617 -72217533 + AluSx SINE Alu 1 293 -19 815 199 108 70 chr5 127413493 127413835 -72216315 - MLT1B LTR MaLR -35 355 1 497 248 47 16 chr5 127414548 127414677 -72215473 + MIR SINE MIR 53 185 -77 380 234 42 108 chr5 127414867 127415034 -72215116 + L1ME4a LINE L1 5662 5817 -304 461 312 63 42 chr5 127415035 127415272 -72214878 + L1ME4a LINE L1 5880 6121 0 2451 87 10 3 chr5 127415967 127416277 -72213873 - AluSx SINE Alu 0 312 1 2373 196 48 0 chr5 127416745 127417240 -72212910 + LTR53 LTR ERVL 1 519 0 1275 171 0 0 chr5 127418922 127419121 -72211029 + Tigger7 DNA MER2_type 1 199 -534 455 174 98 0 chr5 127419164 127419256 -72210894 + Tigger7 DNA MER2_type 2382 2482 -5 927 240 88 32 chr5 127419285 127419593 -72210557 - MLT1C LTR MaLR -29 438 114 947 295 92 31 chr5 127419892 127420411 -72209739 + L1MC4 LINE L1 6806 7356 -686 2333 102 0 16 chr5 127420703 127421017 -72209133 + AluSp SINE Alu 1 309 -4 2269 124 0 0 chr5 127422203 127422509 -72207641 - AluJb SINE Alu -6 306 1 1580 150 15 142 chr5 127422562 127422779 -72207371 + MER57A LTR ERV1 1 131 -272 2262 108 16 0 chr5 127422779 127423086 -72207064 + AluSq SINE Alu 1 312 -1 1580 150 15 142 chr5 127423086 127423327 -72206823 + MER57A LTR ERV1 131 401 -2 709 285 105 38 chr5 127423531 127423903 -72206247 - MLT1K LTR MaLR -4 584 188 1200 303 196 10 chr5 127423940 127424995 -72205155 + L2 LINE L2 2033 3302 -11 711 122 0 0 chr5 127425255 127425362 -72204788 + AluY SINE Alu 205 311 0 1872 163 23 0 chr5 127425748 127426048 -72204102 - AluJb SINE Alu -2 310 4 1064 210 130 23 chr5 127426356 127426618 -72203532 + AluSg SINE Alu 12 301 -9 283 256 96 32 chr5 127426898 127427054 -72203096 - HAL1 LINE L1 -2 2505 2340 2237 134 0 0 chr5 127427713 127428018 -72202132 - AluSx SINE Alu -5 307 3 807 143 56 0 chr5 127428116 127428242 -72201908 - FLAM_C SINE Alu -3 140 8 2328 100 3 3 chr5 127428260 127428559 -72201591 - AluSx SINE Alu -13 299 1 2327 98 6 28 chr5 127429025 127429342 -72200808 + AluSx SINE Alu 2 311 -1 180 318 0 32 chr5 127429403 127429466 -72200684 - MIR SINE MIR -21 241 181 1462 172 57 27 chr5 127429506 127429802 -72200348 - AluJo SINE Alu -7 305 1 2169 118 3 7 chr5 127429813 127430117 -72200033 - AluSq SINE Alu -10 303 1 308 286 95 9 chr5 127430118 127430223 -72199927 - MIR SINE MIR -112 150 37 23 0 0 0 chr5 127432886 127432909 -72197241 + AT_rich Low_complexity Low_complexity 1 23 0 1991 197 51 35 chr5 127432960 127433507 -72196643 - MLT1E3 LTR MaLR -2 622 68 730 99 0 18 chr5 127433560 127433671 -72196479 - AluSp/q SINE Alu -17 296 188 1712 106 4 9 chr5 127433671 127433897 -72196253 - AluSp SINE Alu -88 225 1 827 169 15 0 chr5 127434214 127434350 -72195800 - FRAM SINE Alu -19 157 20 2043 65 35 0 chr5 127435302 127435563 -72194587 - AluSx SINE Alu -14 298 29 692 270 70 0 chr5 127436121 127436321 -72193829 - MIR SINE MIR -2 260 47 210 389 69 9 chr5 127436413 127436629 -72193521 + L2 LINE L2 3044 3272 0 614 196 0 7 chr5 127436629 127436772 -72193378 + (TGGA)n Simple_repeat Simple_repeat 2 143 0 402 365 18 6 chr5 127438504 127438671 -72191479 - MIR SINE MIR -11 251 83 394 224 19 70 chr5 127439520 127439676 -72190474 - MIR SINE MIR -54 208 61 279 0 0 0 chr5 127439711 127439742 -72190408 + (A)n Simple_repeat Simple_repeat 1 31 0 307 280 56 8 chr5 127440934 127441059 -72189091 + MIR SINE MIR 59 189 -73 2227 103 0 0 chr5 127441461 127441780 -72188370 + AluSx SINE Alu 1 319 0 27 29 0 0 chr5 127442558 127442592 -72187558 + AT_rich Low_complexity Low_complexity 1 34 0 2391 59 20 16 chr5 127442682 127442985 -72187165 + AluY SINE Alu 1 304 -7 320 257 71 21 chr5 127443343 127443483 -72186667 + L2 LINE L2 2949 3095 -177 2201 110 10 0 chr5 127443723 127444013 -72186137 + AluSx SINE Alu 1 293 -19 1007 279 63 46 chr5 127445073 127445488 -72184662 + MLT1J2 LTR MaLR 21 442 -8 242 235 176 0 chr5 127446181 127446249 -72183901 + MIR SINE MIR 177 256 -6 521 284 70 42 chr5 127447589 127447610 -72182540 + MIR SINE MIR 14 33 -229 2469 93 0 3 chr5 127447610 127447920 -72182230 + AluSq SINE Alu 1 309 -4 521 284 70 42 chr5 127447920 127448113 -72182037 + MIR SINE MIR 33 234 -28 278 270 61 35 chr5 127448632 127448747 -72181403 - L2 LINE L2 -29 3284 3167 2369 92 0 3 chr5 127451310 127451602 -72178548 + AluSq SINE Alu 1 291 -22 1806 184 0 10 chr5 127451607 127451912 -72178238 + AluJb SINE Alu 1 302 -10 2463 76 0 0 chr5 127451912 127452202 -72177948 - AluY SINE Alu -21 290 1 297 276 97 21 chr5 127452847 127452992 -72177158 - MIR SINE MIR -20 242 87 485 263 219 0 chr5 127453278 127453483 -72176667 - MIR SINE MIR -5 257 8 482 296 147 90 chr5 127454179 127454343 -72175807 + L1MC5 LINE L1 7607 7760 -282 2090 135 0 0 chr5 127454343 127454625 -72175525 - AluSx SINE Alu -9 303 22 482 296 147 90 chr5 127454625 127454849 -72175301 + L1MC5 LINE L1 7760 8041 -1 547 265 161 73 chr5 127455283 127455707 -72174443 - MLT1J2 LTR MaLR -23 427 1 202 313 31 16 chr5 127455992 127456056 -72174094 + L2 LINE L2 3174 3238 -34 313 326 40 23 chr5 127456312 127456487 -72173663 + L2 LINE L2 3117 3294 -19 2398 96 0 7 chr5 127457857 127458206 -72171944 - AluSx SINE Alu 0 312 1 2232 115 0 3 chr5 127459203 127459507 -72170643 - AluSx SINE Alu -9 303 1 414 0 0 0 chr5 127460111 127460157 -72169993 + (CA)n Simple_repeat Simple_repeat 2 47 0 355 233 0 0 chr5 127461217 127461290 -72168860 + L2 LINE L2 3200 3272 0 244 236 0 0 chr5 127461928 127461983 -72168167 + L1MEc LINE L1 35 89 -6307 2344 148 57 5 chr5 127461985 127462389 -72167761 - MSTB LTR MaLR -1 425 1 2114 134 0 3 chr5 127462389 127462688 -72167462 + AluSx SINE Alu 1 298 -14 548 140 20 10 chr5 127462688 127462788 -72167362 + L1MD1 LINE L1 6133 6233 -9 33 25 0 0 chr5 127462797 127462837 -72167313 + AT_rich Low_complexity Low_complexity 1 40 0 1727 159 26 88 chr5 127462837 127463344 -72166806 + L1ME2 LINE L1 5680 6155 -9 2107 243 34 82 chr5 127463358 127463758 -72166392 + L1ME3A LINE L1 5144 5562 -608 2149 134 0 0 chr5 127463758 127464048 -72166102 + AluSx SINE Alu 1 290 -22 2107 243 34 82 chr5 127464048 127464728 -72165422 + L1ME3A LINE L1 5562 6170 0 715 233 12 12 chr5 127464839 127465002 -72165148 + MIR SINE MIR 12 174 -88 327 287 70 17 chr5 127465146 127465261 -72164889 + L2 LINE L2 3137 3257 -15 273 203 0 62 chr5 127466416 127466428 -72163722 + AluYb8 SINE Alu 127 134 -174 2377 101 3 0 chr5 127466428 127466725 -72163425 + AluSp SINE Alu 1 298 -15 234 260 27 27 chr5 127466779 127466852 -72163298 - L2 LINE L2 -43 3229 3157 285 286 143 0 chr5 127467736 127467848 -72162302 - L2 LINE L2 -5 3267 3140 2656 134 25 39 chr5 127467922 127468113 -72162037 + MSTA LTR MaLR 1 193 -235 2141 110 6 55 chr5 127468113 127468439 -72161711 + AluSx SINE Alu 1 310 -2 2656 134 25 39 chr5 127468439 127468681 -72161469 + MSTA LTR MaLR 193 428 0 25 51 0 0 chr5 127469443 127469482 -72160668 + AT_rich Low_complexity Low_complexity 1 39 0 1675 144 8 0 chr5 127471041 127471298 -72158852 + AluJb SINE Alu 44 302 -10 454 283 116 7 chr5 127471333 127471471 -72158679 - MER5A DNA MER1_type 0 189 37 432 342 58 0 chr5 127471621 127471776 -72158374 - MIR3 SINE MIR -6 202 39 757 186 24 0 chr5 127472018 127472142 -72158008 + FLAM_A SINE Alu 1 127 -6 406 196 153 61 chr5 127472142 127472210 -72157940 + L1ME4a LINE L1 5823 5883 -238 2385 116 0 0 chr5 127472210 127472520 -72157630 + AluSx SINE Alu 1 310 -2 406 196 153 61 chr5 127472520 127472614 -72157536 + L1ME4a LINE L1 5883 6000 -121 1804 141 0 112 chr5 127472999 127473347 -72156803 + AluJo SINE Alu 1 309 -3 21 0 0 0 chr5 127474845 127474866 -72155284 + AT_rich Low_complexity Low_complexity 1 21 0 288 0 0 0 chr5 127475151 127475183 -72154967 + (A)n Simple_repeat Simple_repeat 1 32 0 2269 91 0 3 chr5 127475185 127475482 -72154668 + AluY SINE Alu 4 299 -12 1199 159 64 118 chr5 127475504 127475800 -72154350 - AluJo SINE Alu -10 302 23 22 0 0 0 chr5 127476026 127476048 -72154102 + AT_rich Low_complexity Low_complexity 1 22 0 2630 230 143 56 chr5 127476155 127477282 -72152868 + L2 LINE L2 251 1475 -1839 992 209 30 5 chr5 127477334 127477535 -72152615 + L1MDa LINE L1 25 230 -6310 546 153 160 8 chr5 127477536 127477667 -72152483 + L1MDa LINE L1 2489 2639 -3901 338 111 0 0 chr5 127477667 127477721 -72152429 - Alu SINE Alu -2 300 247 2850 148 44 26 chr5 127477721 127477865 -72152285 + L1MD1 LINE L1 5685 5825 -417 2053 117 17 20 chr5 127477865 127478165 -72151985 + AluSg SINE Alu 11 309 -1 2850 148 44 26 chr5 127478165 127478560 -72151590 + L1MD1 LINE L1 5825 6234 -8 1609 218 136 2 chr5 127478592 127479018 -72151132 + L2 LINE L2 2376 2858 -456 260 213 131 0 chr5 127479020 127479081 -72151069 + L2 LINE L2 3237 3305 -8 1698 180 7 3 chr5 127479562 127479846 -72150304 + AluJb SINE Alu 1 285 -27 2098 80 52 7 chr5 127479862 127480150 -72150000 + AluSc SINE Alu 1 301 -8 186 191 0 0 chr5 127483260 127483302 -72146848 + CT-rich Low_complexity Low_complexity 3 44 0 591 168 0 0 chr5 127486005 127486100 -72144050 - FLAM_C SINE Alu -9 134 40 318 330 10 0 chr5 127486106 127486209 -72143941 - MIR SINE MIR -122 140 37 211 246 18 53 chr5 127486386 127486443 -72143707 - L2 LINE L2 -5 3267 3213 585 294 85 32 chr5 127486577 127486825 -72143325 - MIR SINE MIR 0 262 2 426 39 0 0 chr5 127487423 127487475 -72142675 + (TG)n Simple_repeat Simple_repeat 1 52 0 2525 84 0 0 chr5 127487925 127488236 -72141914 + AluY SINE Alu 1 311 0 197 136 23 23 chr5 127488322 127488366 -72141784 - L2 LINE L2 -213 3059 3016 400 279 36 9 chr5 127488972 127489083 -72141067 + L2 LINE L2 3200 3313 0 1789 170 72 30 chr5 127489168 127489597 -72140553 + MLT1C LTR MaLR 8 454 -13 4041 148 11 37 chr5 127489793 127490524 -72139626 - MER50 LTR ERV1 -22 712 1 181 227 76 109 chr5 127491046 127491165 -72138985 - L2 LINE L2 -518 2796 2682 4011 134 29 2 chr5 127491543 127492161 -72137989 - MER41B LTR ERV1 0 635 1 3555 134 34 22 chr5 127492314 127492358 -72137792 + LTR26 LTR ERV1 1 43 -560 1788 154 72 0 chr5 127492358 127492637 -72137513 + AluSx SINE Alu 1 299 -13 3555 134 34 22 chr5 127492637 127493188 -72136962 + LTR26 LTR ERV1 43 603 0 493 275 78 34 chr5 127493278 127493547 -72136603 + L1ME LINE L1 5401 5681 -440 207 0 0 0 chr5 127493794 127493817 -72136333 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2153 217 75 93 chr5 127493821 127495297 -72134853 - HAL1 LINE L1 -44 2463 1014 1034 93 70 0 chr5 127495301 127495473 -72134677 - L1MC/D LINE L1 -728 5605 5422 486 0 0 0 chr5 127495477 127495531 -72134619 + (TTCC)n Simple_repeat Simple_repeat 3 56 0 1390 195 64 0 chr5 127495533 127495784 -72134366 - AluJb SINE Alu -33 279 13 373 164 59 86 chr5 127495805 127495957 -72134193 - L1M LINE L1 -906 5427 5280 460 244 103 44 chr5 127495958 127496229 -72133921 - HAL1 LINE L1 -2164 343 57 500 224 60 9 chr5 127496242 127496358 -72133792 - L1MC/D LINE L1 -2246 5562 5441 550 197 132 88 chr5 127496373 127496601 -72133549 - MLT1L LTR MaLR -333 282 45 591 278 117 24 chr5 127496830 127497035 -72133115 + MIR SINE MIR 20 243 -19 228 294 15 0 chr5 127497153 127497221 -72132929 + L2 LINE L2 3202 3270 -2 198 266 181 11 chr5 127497835 127497929 -72132221 + L2 LINE L2 3158 3267 -5 215 211 0 0 chr5 127498210 127498248 -72131902 - L2 LINE L2 -19 3294 3257 210 143 0 0 chr5 127498797 127498832 -72131318 + (CA)n Simple_repeat Simple_repeat 1 35 0 409 322 46 17 chr5 127498988 127499162 -72130988 + L2 LINE L2 3073 3251 -21 222 139 0 0 chr5 127499822 127499858 -72130292 - L2 LINE L2 -100 3172 3137 572 207 34 142 chr5 127501186 127501481 -72128669 - MLT1C LTR MaLR -75 315 53 771 254 86 61 chr5 127501598 127502075 -72128075 - HAL1 LINE L1 -1914 593 105 534 238 55 0 chr5 127502393 127502557 -72127593 + LTR33 LTR ERVL 24 196 -325 379 305 137 0 chr5 127502797 127502928 -72127222 + L2 LINE L2 3162 3310 -3 231 257 0 0 chr5 127504716 127504790 -72125360 + (TATG)n Simple_repeat Simple_repeat 1 74 0 2222 84 0 0 chr5 127504965 127505240 -72124910 - AluSg SINE Alu -35 275 1 2535 63 0 16 chr5 127505243 127505559 -72124591 - AluY SINE Alu 0 311 1 255 61 0 0 chr5 127506653 127506686 -72123464 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1668 190 0 11 chr5 127506697 127506971 -72123179 - AluJo SINE Alu -41 271 1 2290 187 75 17 chr5 127507054 127507241 -72122909 + MLT1D LTR MaLR 1 176 -329 2122 115 34 0 chr5 127507241 127507537 -72122613 + AluSx SINE Alu 1 306 -6 2290 187 75 17 chr5 127507537 127507826 -72122324 + MLT1D LTR MaLR 176 505 0 324 327 18 0 chr5 127507927 127508037 -72122113 - MIR SINE MIR -5 257 146 1286 163 249 6 chr5 127508044 127508357 -72121793 - MLT1F1 LTR MaLR -1 566 178 1449 151 65 48 chr5 127508405 127508697 -72121453 + AluJo SINE Alu 1 297 -15 294 95 0 0 chr5 127508701 127508743 -72121407 + (TTCC)n Simple_repeat Simple_repeat 4 45 0 7534 74 5 210 chr5 127508849 127510494 -72119656 + SVA Other Other 79 1386 0 535 247 7 40 chr5 127510519 127510669 -72119481 - MLT1F1 LTR MaLR -445 148 4 371 254 205 33 chr5 127510671 127510793 -72119357 - MIR SINE MIR -118 144 2 897 181 55 16 chr5 127511489 127511671 -72118479 + MER5A DNA MER1_type 1 189 0 265 283 50 10 chr5 127511932 127512031 -72118119 - L1ME LINE L1 -260 5861 5759 526 235 46 0 chr5 127512419 127512572 -72117578 + L1ME4a LINE L1 5956 6115 -6 11771 87 14 70 chr5 127514019 127516000 -72114150 - L1P LINE L1 -3731 2415 546 26 30 0 0 chr5 127516664 127516697 -72113453 + AT_rich Low_complexity Low_complexity 1 33 0 364 265 20 0 chr5 127516808 127516906 -72113244 + U13 snRNA snRNA 4 103 -1 235 185 0 56 chr5 127517242 127517296 -72112854 + MIR SINE MIR 125 175 -87 2041 175 25 2 chr5 127517586 127517981 -72112169 + L1MC3 LINE L1 7218 7621 -164 931 47 94 0 chr5 127518071 127518198 -72111952 + MER85 DNA T2_type 1 139 0 297 284 83 28 chr5 127519459 127519568 -72110582 - L2 LINE L2 -165 3107 2993 1261 186 85 7 chr5 127521396 127521691 -72108459 + MER33 DNA MER1_type 2 319 -5 500 205 8 0 chr5 127521710 127521813 -72108337 + MER5A DNA MER1_type 6 109 -80 2134 93 14 4 chr5 127521933 127522213 -72107937 + AluSq SINE Alu 5 287 -26 1693 146 0 25 chr5 127523066 127523340 -72106810 - AluJb SINE Alu -13 299 33 226 267 186 0 chr5 127523655 127523741 -72106409 + MER5A DNA MER1_type 35 136 -53 1451 188 25 44 chr5 127524184 127524718 -72105432 + MLT1E2 LTR MaLR 1 617 -9 414 300 40 75 chr5 127526037 127526290 -72103860 + MIR SINE MIR 3 246 -16 244 220 0 0 chr5 127526419 127526469 -72103681 + L2 LINE L2 3261 3310 -3 383 203 119 8 chr5 127528271 127528389 -72101761 + MER103 DNA DNA 3 133 -33 958 237 50 90 chr5 127528831 127529501 -72100649 + MLT1G LTR MaLR 1 590 0 2054 140 0 34 chr5 127529607 127529929 -72100221 + AluSx SINE Alu 1 311 -1 733 297 128 14 chr5 127530311 127531990 -72098160 + L1MEc LINE L1 790 2615 -3600 21 0 0 0 chr5 127532911 127532932 -72097218 + AT_rich Low_complexity Low_complexity 1 21 0 359 299 93 36 chr5 127533311 127533589 -72096561 - L1ME4a LINE L1 -295 5826 5533 304 325 44 0 chr5 127533953 127534067 -72096083 - MIR3 SINE MIR -9 199 81 497 235 52 20 chr5 127534524 127534677 -72095473 - MLT1I LTR MaLR -15 394 237 1042 212 91 19 chr5 127534724 127535031 -72095119 + MER58B DNA MER1_type 1 329 -12 308 336 105 7 chr5 127535043 127535186 -72094964 - MLT1I LTR MaLR -236 173 17 243 250 228 22 chr5 127536851 127536943 -72093207 - MIR SINE MIR -68 140 30 198 260 171 41 chr5 127537062 127537208 -72092942 + MIR3 SINE MIR 3 167 -41 1993 111 37 24 chr5 127538383 127538680 -72091470 - AluSx SINE Alu -6 306 6 265 149 0 40 chr5 127539339 127539413 -72090737 - L1ME4a LINE L1 -3 6118 6048 247 267 0 17 chr5 127540923 127540983 -72089167 - MIR SINE MIR -184 78 20 1144 208 157 53 chr5 127541012 127541463 -72088687 + MLT1D LTR MaLR 6 503 -2 262 303 72 46 chr5 127542600 127542752 -72087398 + MIR3 SINE MIR 34 189 -19 741 161 63 7 chr5 127543242 127543385 -72086765 + MER21B LTR ERV1 3 153 -710 1698 178 65 40 chr5 127543396 127543786 -72086364 + MER21B LTR ERV1 478 854 -6 266 240 70 54 chr5 127544026 127544155 -72085995 - MIR3 SINE MIR -35 173 43 262 176 0 245 chr5 127544701 127544860 -72085290 + L2 LINE L2 3126 3245 -68 440 277 15 15 chr5 127546249 127546379 -72083771 + MER94 DNA DNA 1 130 -4 468 304 44 13 chr5 127547737 127547895 -72082255 + MIR SINE MIR 28 190 -72 407 280 18 60 chr5 127548950 127549118 -72081032 + MIR SINE MIR 28 188 -74 201 147 0 0 chr5 127550017 127550051 -72080099 + (TG)n Simple_repeat Simple_repeat 1 34 0 411 21 0 0 chr5 127550051 127550099 -72080051 + (TA)n Simple_repeat Simple_repeat 1 48 0 451 317 70 5 chr5 127551021 127551207 -72078943 + MIR SINE MIR 29 226 -36 542 209 113 23 chr5 127551520 127551697 -72078453 + LTR33A LTR ERVL 331 523 0 462 257 155 34 chr5 127551720 127551926 -72078224 + MIR SINE MIR 20 250 -12 401 294 13 52 chr5 127553286 127553439 -72076711 - MER5A DNA MER1_type -6 183 37 373 291 40 47 chr5 127553307 127553455 -72076695 + MER5A DNA MER1_type 39 185 -4 * 322 273 172 10 chr5 127553938 127554037 -72076113 - MER5B DNA MER1_type -2 176 62 2100 290 70 30 chr5 127554422 127555603 -72074547 - L2 LINE L2 -25 3288 2077 3125 166 19 60 chr5 127556200 127556838 -72073312 + LTR9 LTR ERV1 1 612 0 342 337 37 6 chr5 127557250 127557413 -72072737 + L2 LINE L2 3104 3271 -1 2331 102 3 3 chr5 127557777 127558080 -72072070 - AluSx SINE Alu -9 303 1 256 239 62 53 chr5 127561784 127561897 -72068253 - MER103 DNA DNA -45 121 8 2240 50 4 0 chr5 127562262 127562522 -72067628 - AluY SINE Alu -6 305 45 310 51 0 0 chr5 127563194 127563233 -72066917 - AluY SINE Alu -250 58 20 536 265 57 70 chr5 127563241 127563471 -72066679 - MIR SINE MIR -7 255 29 1882 158 7 13 chr5 127564477 127564775 -72065375 - AluJb SINE Alu -16 296 1 312 225 28 0 chr5 127564784 127564855 -72065295 - L1MB7 LINE L1 -1 6183 6111 1539 170 89 46 chr5 127565182 127565201 -72064949 - L1MB8 LINE L1 -42 6136 6119 2205 102 0 3 chr5 127565201 127565486 -72064664 + AluSx SINE Alu 3 286 -26 215 61 30 0 chr5 127565486 127565519 -72064631 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 1539 170 89 46 chr5 127565519 127565930 -72064220 - L1MB8 LINE L1 -58 6120 5573 267 242 15 0 chr5 127567039 127567105 -72063045 + L1ME LINE L1 5731 5797 -369 268 304 80 75 chr5 127570078 127570279 -72059871 + L2 LINE L2 2316 2517 -797 224 243 214 0 chr5 127570803 127570873 -72059277 - L2 LINE L2 -2 3270 3186 940 239 19 19 chr5 127570970 127571175 -72058975 + MER58A DNA MER1_type 1 205 -19 348 324 141 30 chr5 127571286 127571871 -72058279 - L2 LINE L2 -244 3028 2381 232 319 60 37 chr5 127571979 127572195 -72057955 - L2 LINE L2 -1282 2032 1812 2203 113 0 0 chr5 127572264 127572565 -72057585 + AluSx SINE Alu 1 301 -11 628 274 111 77 chr5 127572800 127573330 -72056820 - MLT1K LTR MaLR -22 566 19 338 273 57 135 chr5 127573357 127573654 -72056496 - L2 LINE L2 -50 3222 2949 1605 211 80 0 chr5 127573673 127574009 -72056141 - MER89 LTR ERV1 0 559 197 294 232 37 0 chr5 127573982 127574064 -72056086 - MER89 LTR ERV1 -470 89 5 * 2242 100 3 3 chr5 127574605 127574914 -72055236 - AluSx SINE Alu -2 310 2 790 311 37 24 chr5 127575082 127575519 -72054631 + L2 LINE L2 2622 3060 -253 3030 163 79 28 chr5 127575581 127576190 -72053960 - L1MC1 LINE L1 -19 6314 5675 343 248 148 40 chr5 127576190 127576339 -72053811 + L2 LINE L2 3119 3283 -30 468 307 18 12 chr5 127576776 127576942 -72053208 - MIR SINE MIR -6 256 90 208 244 0 0 chr5 127577261 127577306 -72052844 - MER5A DNA MER1_type -107 82 38 528 16 0 0 chr5 127577453 127577514 -72052636 + (TG)n Simple_repeat Simple_repeat 2 62 0 393 279 129 39 chr5 127577767 127578000 -72052150 - L3 LINE CR1 -170 1407 1154 2081 120 0 0 chr5 127578596 127578887 -72051263 + AluSx SINE Alu 1 291 -21 2361 189 49 31 chr5 127578889 127579445 -72050705 - L1MB5 LINE L1 -34 6140 5575 657 272 12 30 chr5 127579506 127579675 -72050475 + MIR3 SINE MIR 14 179 -29 227 195 0 0 chr5 127580405 127580446 -72049704 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 332 316 61 26 chr5 127580467 127580581 -72049569 - L2 LINE L2 -24 3289 3172 601 312 56 70 chr5 127580704 127581001 -72049149 - L2 LINE L2 -343 2971 2680 403 73 0 0 chr5 127581001 127581056 -72049094 + L1MA5 LINE L1 6244 6298 -2 601 312 56 70 chr5 127581056 127581203 -72048947 - L2 LINE L2 -634 2680 2533 1050 209 23 5 chr5 127582310 127582525 -72047625 + MER20 DNA MER1_type 1 219 0 190 373 9 18 chr5 127584538 127584648 -72045502 - MIR SINE MIR -31 231 123 180 233 136 48 chr5 127585175 127585278 -72044872 - MIR SINE MIR -109 153 42 479 95 14 0 chr5 127585637 127585711 -72044439 + (TG)n Simple_repeat Simple_repeat 2 76 0 331 271 16 45 chr5 127586375 127586526 -72043624 + L1P5 LINE L1 5318 5477 -644 439 211 33 11 chr5 127587628 127587718 -72042432 - MER94 DNA DNA -29 105 14 425 287 200 15 chr5 127588238 127588433 -72041717 + MIR SINE MIR 31 261 -1 190 298 35 0 chr5 127588576 127588633 -72041517 - MIR SINE MIR -111 151 93 420 290 55 14 chr5 127588754 127588899 -72041251 - MIR SINE MIR -94 168 18 202 298 19 58 chr5 127589758 127589862 -72040288 + MIR SINE MIR 43 142 -66 216 255 0 0 chr5 127591021 127591068 -72039082 + (CAA)n Simple_repeat Simple_repeat 1 47 0 773 311 49 4 chr5 127591090 127591315 -72038835 - MIR SINE MIR -27 235 1 412 207 35 0 chr5 127591457 127591544 -72038606 + MER53 DNA DNA 96 185 -4 247 237 17 0 chr5 127592202 127592261 -72037889 + L2 LINE L2 3211 3270 -2 215 290 32 0 chr5 127592380 127592442 -72037708 + L2 LINE L2 3200 3263 -9 203 267 44 41 chr5 127592463 127592594 -72037556 + MIR SINE MIR 15 143 -65 1587 209 32 22 chr5 127593871 127594240 -72035910 - MLT1A2 LTR MaLR 0 374 2 803 277 22 9 chr5 127594502 127594726 -72035424 + MIR SINE MIR 30 256 -6 1802 218 150 30 chr5 127594741 127595546 -72034604 + L2 LINE L2 2159 3109 -204 252 0 0 0 chr5 127595546 127595574 -72034576 + (CA)n Simple_repeat Simple_repeat 1 28 0 1802 218 150 30 chr5 127595574 127595805 -72034345 + L2 LINE L2 3109 3311 -2 1021 156 112 15 chr5 127597570 127597775 -72032375 + L1MB5 LINE L1 5939 6163 -11 2059 244 59 24 chr5 127597783 127598924 -72031226 - L1MDa LINE L1 -1286 5254 3410 330 237 10 72 chr5 127598930 127599027 -72031123 - L1MC4 LINE L1 -1338 6704 6614 646 204 15 29 chr5 127599028 127599165 -72030985 - AluJo SINE Alu -176 136 2 3042 192 51 49 chr5 127599165 127599850 -72030300 - L1MDa LINE L1 -3109 3431 2753 1946 137 62 45 chr5 127599850 127600208 -72029942 - THE1B LTR MaLR 0 364 1 3042 192 51 49 chr5 127600208 127600635 -72029515 - L1MDa LINE L1 -3787 2753 2328 2547 87 37 70 chr5 127600635 127601011 -72029139 + L1P LINE L1 2830 3190 -2956 2180 118 3 3 chr5 127601011 127601324 -72028826 - AluSp SINE Alu 0 313 1 2547 87 37 70 chr5 127601324 127601407 -72028743 + L1P LINE L1 3190 3274 -2872 21 0 0 0 chr5 127602771 127602792 -72027358 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 127602991 127603029 -72027121 + AT_rich Low_complexity Low_complexity 1 38 0 201 351 13 0 chr5 127603475 127603552 -72026598 + CT-rich Low_complexity Low_complexity 3 80 0 24 32 0 0 chr5 127604194 127604225 -72025925 + AT_rich Low_complexity Low_complexity 1 31 0 211 159 204 0 chr5 127606054 127606098 -72024052 + L2 LINE L2 3261 3313 0 230 261 49 78 chr5 127606355 127606451 -72023699 + MIR SINE MIR 79 171 -91 1904 139 40 91 chr5 127606451 127606846 -72023304 - THE1C LTR MaLR 0 375 1 230 261 49 78 chr5 127606846 127606891 -72023259 + MIR SINE MIR 171 216 -46 451 219 123 26 chr5 127607386 127607500 -72022650 + L2 LINE L2 3183 3307 -6 235 376 21 0 chr5 127608821 127608914 -72021236 - L2 LINE L2 -39 3233 3139 229 258 55 39 chr5 127609741 127609869 -72020281 + MLT1J2 LTR MaLR 15 144 -306 1278 203 8 23 chr5 127609904 127610170 -72019980 + MLT2B1 LTR ERVL 6 267 -253 286 301 168 0 chr5 127610340 127610453 -72019697 + MLT1J2 LTR MaLR 305 436 -14 241 231 65 93 chr5 127610546 127610654 -72019496 - L3 LINE CR1 -48 1529 1425 368 293 21 59 chr5 127610955 127611207 -72018943 - L2 LINE L2 -282 2990 2740 565 83 12 0 chr5 127611208 127611292 -72018858 - Alu SINE Alu -2 309 225 517 276 198 19 chr5 127611298 127611606 -72018544 - L2 LINE L2 -569 2745 2383 4738 182 40 22 chr5 127612206 127613600 -72016550 + L1MB3 LINE L1 4179 5546 -637 2180 89 0 25 chr5 127613600 127613916 -72016234 + AluSg SINE Alu 3 310 0 4738 182 40 22 chr5 127613916 127614128 -72016022 + L1MB3 LINE L1 5546 5753 -430 1358 166 106 18 chr5 127614128 127614412 -72015738 + AluJo SINE Alu 2 310 -2 4738 182 40 22 chr5 127614412 127614767 -72015383 + L1MB3 LINE L1 5753 6176 -7 208 125 0 42 chr5 127615059 127615107 -72015043 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 238 261 81 73 chr5 127615235 127615495 -72014655 + HAL1 LINE L1 824 1085 -1422 387 245 102 92 chr5 127615524 127615720 -72014430 + HAL1 LINE L1 1188 1385 -1122 474 276 75 43 chr5 127615723 127616157 -72013993 + L1M4 LINE L1 4723 5167 -979 340 287 133 43 chr5 127616165 127616653 -72013497 + L1M4 LINE L1 4316 4847 -1299 291 288 157 29 chr5 127616661 127616856 -72013294 + L1M4 LINE L1 4877 5046 -1100 1389 206 28 24 chr5 127616856 127616995 -72013155 + AluJo SINE Alu 1 138 -164 1887 100 29 65 chr5 127616995 127617304 -72012846 + AluSx SINE Alu 1 298 -14 1389 206 28 24 chr5 127617304 127617451 -72012699 + AluJo SINE Alu 138 288 -14 291 288 157 29 chr5 127617451 127617700 -72012450 + L1M4 LINE L1 5046 5378 -768 352 211 163 84 chr5 127617713 127617903 -72012247 - MLT1D LTR MaLR -171 334 130 438 199 135 35 chr5 127618255 127618396 -72011754 - MLT1D LTR MaLR -350 155 1 430 267 99 0 chr5 127618406 127618537 -72011613 + MIR SINE MIR 119 262 0 653 248 76 20 chr5 127618556 127618970 -72011180 + L1ME4a LINE L1 5083 5517 -647 236 288 170 20 chr5 127619040 127619193 -72010957 - MER104 DNA Tc2 -1 179 4 425 249 188 24 chr5 127619193 127619358 -72010792 + L1ME4a LINE L1 5719 5910 -211 271 176 44 44 chr5 127619416 127619484 -72010666 + MLT1H LTR MaLR 1 68 -481 231 36 0 0 chr5 127619992 127620020 -72010130 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 342 259 134 69 chr5 127620183 127620430 -72009720 + MLT1H-int LTR MaLR 1449 1711 -24 337 231 130 81 chr5 127620545 127620853 -72009297 + MLT1H LTR MaLR 130 526 -23 1752 138 0 34 chr5 127620935 127621051 -72009099 + AluSx SINE Alu 1 119 -192 2176 105 105 20 chr5 127621051 127621395 -72008755 - THE1C LTR MaLR -2 373 1 1752 138 0 34 chr5 127621395 127621599 -72008551 + AluSx SINE Alu 119 311 0 295 271 79 38 chr5 127621639 127621871 -72008279 + L1ME LINE L1 5324 5570 -592 2800 205 92 35 chr5 127621982 127622263 -72007887 + L1MD2 LINE L1 5304 5568 -791 2294 85 0 0 chr5 127622263 127622557 -72007593 + AluY SINE Alu 1 294 -17 2800 205 92 35 chr5 127622557 127623049 -72007101 + L1MD2 LINE L1 5568 6121 -238 1939 106 53 0 chr5 127623481 127623763 -72006387 + AluSx SINE Alu 1 297 -15 1675 147 17 30 chr5 127624913 127625073 -72005077 - AluJo SINE Alu -16 296 140 2240 97 0 0 chr5 127625073 127625373 -72004777 - AluSx SINE Alu -12 300 1 1675 147 17 30 chr5 127625373 127625512 -72004638 - AluJo SINE Alu -172 140 1 2311 93 3 3 chr5 127626609 127626922 -72003228 - AluSp SINE Alu 0 313 1 266 233 29 150 chr5 127627170 127627536 -72002614 - L1MEd LINE L1 -2978 3151 2897 2201 95 3 0 chr5 127627536 127627831 -72002319 - AluSx SINE Alu -15 297 2 266 233 29 150 chr5 127627831 127628117 -72002033 - L1MEd LINE L1 -3232 2897 2578 23 0 0 0 chr5 127628122 127628145 -72002005 + AT_rich Low_complexity Low_complexity 1 23 0 1382 135 15 75 chr5 127628145 127628411 -72001739 - AluSx SINE Alu -62 250 1 367 267 109 35 chr5 127628424 127628709 -72001441 - L1MEd LINE L1 -3563 2566 2261 1870 158 28 14 chr5 127628726 127629087 -72001063 - L1MB7 LINE L1 -16 6168 5803 496 331 11 6 chr5 127629120 127629295 -72000855 - L1MEd LINE L1 -5701 418 243 416 236 159 45 chr5 127629310 127629467 -72000683 - L1MEd LINE L1 -5942 177 3 747 224 113 80 chr5 127629475 127629961 -72000189 - L1ME3A LINE L1 -5 6165 5664 307 351 0 9 chr5 127629961 127630072 -72000078 - L1ME3A LINE L1 -1224 4922 4813 38268 32 25 3 chr5 127630077 127635525 -71994625 - L1PA3 LINE L1 0 6470 893 654 36 0 0 chr5 127635492 127635588 -71994562 - L1PA3 LINE L1 -6081 380 10 * 464 271 15 35 chr5 127635591 127635705 -71994445 - L1ME3A LINE L1 -1324 4822 4712 1946 152 0 0 chr5 127635705 127636008 -71994142 - AluJb SINE Alu -9 303 1 464 271 15 35 chr5 127636008 127636092 -71994058 - L1ME3A LINE L1 -1434 4712 4628 1089 117 0 0 chr5 127636116 127636270 -71993880 + AluY SINE Alu 148 301 -10 1856 255 99 35 chr5 127636270 127636596 -71993554 - L1ME3A LINE L1 -1549 4597 4293 1386 169 85 0 chr5 127636596 127636868 -71993282 - AluJo SINE Alu -17 295 1 1856 255 99 35 chr5 127636868 127637565 -71992585 - L1ME3A LINE L1 -1853 4293 3509 4490 172 17 49 chr5 127637566 127638507 -71991643 - L1MD1 LINE L1 -14 6228 5316 2008 140 3 0 chr5 127638507 127638815 -71991335 - AluSx SINE Alu -1 311 3 4490 172 17 49 chr5 127638815 127638831 -71991319 - L1MD1 LINE L1 -926 5316 5301 618 282 133 30 chr5 127638968 127639333 -71990817 + L2 LINE L2 2632 2958 -355 222 37 0 0 chr5 127639333 127639360 -71990790 + (CCCTG)n Simple_repeat Simple_repeat 4 30 0 618 282 133 30 chr5 127639360 127639541 -71990609 + L2 LINE L2 2958 3307 -6 423 246 148 35 chr5 127640076 127640279 -71989871 + MIR SINE MIR 26 251 -11 741 218 129 5 chr5 127640680 127640882 -71989268 + MIR SINE MIR 2 228 -34 209 298 43 21 chr5 127643907 127644001 -71986149 + MIR SINE MIR 58 153 -55 225 171 0 0 chr5 127645639 127645674 -71984476 - L2 LINE L2 -13 3300 3266 204 289 94 71 chr5 127648139 127648405 -71981745 + L2 LINE L2 2924 3195 -77 214 276 132 0 chr5 127649226 127649302 -71980848 - MIR3 SINE MIR -12 196 111 1848 143 14 0 chr5 127649867 127650160 -71979990 + AluSx SINE Alu 1 297 -15 539 229 120 16 chr5 127650432 127650624 -71979526 - L2 LINE L2 -1514 1800 1589 1120 233 194 39 chr5 127650625 127651085 -71979065 - L2 LINE L2 -2783 531 1 411 186 49 20 chr5 127651373 127651475 -71978675 + MER5A DNA MER1_type 47 151 -38 274 289 144 0 chr5 127651817 127651921 -71978229 + L2 LINE L2 3143 3261 -11 313 269 81 47 chr5 127652091 127652171 -71977979 - L1MEc LINE L1 -1449 4766 4690 1840 153 0 7 chr5 127652171 127652466 -71977684 - AluJb SINE Alu -18 294 2 313 269 81 47 chr5 127652466 127652619 -71977531 - L1MEc LINE L1 -1525 4690 4525 484 324 74 24 chr5 127652887 127653307 -71976843 - L1MEc LINE L1 -2092 4123 3683 1851 158 0 3 chr5 127653453 127653763 -71976387 - AluJb SINE Alu -3 309 1 396 318 67 22 chr5 127653852 127654031 -71976119 - L1MEc LINE L1 -2866 3349 3163 236 260 39 39 chr5 127656790 127656867 -71973283 + MIR SINE MIR 16 92 -116 391 178 14 0 chr5 127658025 127658098 -71972052 - MER116 DNA Mariner -1 79 6 324 0 0 0 chr5 127659783 127659819 -71970331 + (A)n Simple_repeat Simple_repeat 1 36 0 206 302 35 0 chr5 127659884 127659970 -71970180 + GA-rich Low_complexity Low_complexity 2 90 0 501 277 65 7 chr5 127660025 127660180 -71969970 + MIR3 SINE MIR 20 183 -25 215 333 0 0 chr5 127661204 127661261 -71968889 - L2 LINE L2 -93 3179 3123 391 279 63 30 chr5 127662214 127662362 -71967788 + MIR SINE MIR 3 152 -75 347 315 106 19 chr5 127662400 127662711 -71967439 - L2 LINE L2 -976 2338 2001 1912 258 134 30 chr5 127662725 127663878 -71966272 - L2 LINE L2 0 3313 2034 294 271 119 13 chr5 127663892 127664043 -71966107 - L2 LINE L2 -1390 1924 1758 2700 275 134 59 chr5 127664853 127665061 -71965089 - L2 LINE L2 -441 2873 2682 1978 72 3 172 chr5 127665061 127665410 -71964740 + AluSq SINE Alu 1 290 -23 2700 275 134 59 chr5 127665410 127665635 -71964515 - L2 LINE L2 -632 2682 2475 1888 179 94 40 chr5 127665635 127666114 -71964036 + MLT1D LTR MaLR 1 505 0 2700 275 134 59 chr5 127666114 127667321 -71962829 - L2 LINE L2 -839 2475 1109 1041 222 77 16 chr5 127667326 127667637 -71962513 - L1MEc LINE L1 -3288 2927 2598 840 258 45 8 chr5 127667679 127668065 -71962085 - L1MEc LINE L1 -3732 2523 2122 401 325 64 34 chr5 127668076 127668310 -71961840 - L1MEc LINE L1 -4304 2092 1852 924 276 192 21 chr5 127668644 127669300 -71960850 - L2 LINE L2 -1105 2209 1442 803 251 28 24 chr5 127669330 127669541 -71960609 + MER20 DNA MER1_type 2 213 -6 269 262 0 0 chr5 127672787 127672848 -71957302 - MIR SINE MIR -63 145 85 330 320 126 19 chr5 127674053 127674225 -71955925 + L1ME4a LINE L1 5635 5787 -334 2599 58 0 13 chr5 127674225 127674535 -71955615 + AluY SINE Alu 1 306 -5 330 320 126 19 chr5 127674535 127674671 -71955479 + L1ME4a LINE L1 5787 5976 -145 852 182 163 4 chr5 127678464 127678722 -71951428 - MER33 DNA MER1_type -1 323 25 714 160 0 144 chr5 127680227 127680306 -71949844 - MER45A DNA AcHobo -1404 177 88 2133 117 0 7 chr5 127680306 127680587 -71949563 + AluSx SINE Alu 1 279 -33 714 160 0 144 chr5 127680587 127680604 -71949546 - MER45A DNA AcHobo -1493 88 70 2367 106 0 0 chr5 127680604 127680905 -71949245 + AluSq SINE Alu 1 301 -12 714 160 0 144 chr5 127680905 127680995 -71949155 - MER45A DNA AcHobo -1511 70 17 280 305 84 0 chr5 127681007 127681102 -71949048 - MIR SINE MIR -62 200 98 904 254 124 60 chr5 127682029 127682356 -71947794 + L1ME3A LINE L1 5623 5996 -174 2226 112 10 13 chr5 127682356 127682660 -71947490 + AluSx SINE Alu 1 303 -9 904 254 124 60 chr5 127682660 127682847 -71947303 + L1ME3A LINE L1 5996 6170 0 189 322 104 9 chr5 127684138 127684253 -71945897 - MIR3 SINE MIR -15 193 68 1878 141 71 31 chr5 127684477 127684803 -71945347 + MER1B DNA MER1_type 1 339 0 1001 246 123 47 chr5 127685050 127685473 -71944677 + MLT1C LTR MaLR 6 460 -7 374 300 15 23 chr5 127686279 127686409 -71943741 + L2 LINE L2 3138 3266 -6 431 250 125 0 chr5 127686695 127686847 -71943303 - MIR SINE MIR 0 262 92 320 264 27 27 chr5 127687467 127687577 -71942573 - L2 LINE L2 -225 3047 2938 336 24 0 0 chr5 127688566 127688607 -71941543 + (TG)n Simple_repeat Simple_repeat 1 41 0 1895 153 137 8 chr5 127689067 127689446 -71940704 - MSTA LTR MaLR 0 428 1 748 242 77 0 chr5 127691468 127691650 -71938500 + MIR SINE MIR 46 241 -21 245 114 0 0 chr5 127692002 127692046 -71938104 - L2 LINE L2 -213 3059 3016 2644 57 0 0 chr5 127692433 127692731 -71937419 + AluY SINE Alu 1 298 -13 181 298 111 55 chr5 127693017 127693252 -71936898 + L2 LINE L2 2848 3095 -218 379 248 124 0 chr5 127693347 127693476 -71936674 + MIR SINE MIR 118 262 0 235 267 0 33 chr5 127693503 127693563 -71936587 + MIR SINE MIR 58 115 -147 792 264 6 0 chr5 127696700 127696874 -71933276 + MER58A DNA MER1_type 37 211 -13 1119 269 62 38 chr5 127698783 127699203 -71930947 + MLT1J2 LTR MaLR 3 432 -18 264 222 16 0 chr5 127699678 127699741 -71930409 + MIR SINE MIR 106 169 -93 4813 256 116 11 chr5 127699789 127701604 -71928546 + L2 LINE L2 558 2564 -750 608 266 101 107 chr5 127701723 127702246 -71927904 - MLT1K LTR MaLR 0 588 69 295 306 153 28 chr5 127702714 127702858 -71927292 - L2 LINE L2 0 3272 3111 530 301 183 22 chr5 127703388 127703880 -71926270 - L2 LINE L2 -667 2647 2077 434 138 0 23 chr5 127704166 127704253 -71925897 + (TCCC)n Simple_repeat Simple_repeat 1 85 0 208 338 0 0 chr5 127704805 127704876 -71925274 + MIR3 SINE MIR 101 171 -37 21 36 0 0 chr5 127704929 127704957 -71925193 + AT_rich Low_complexity Low_complexity 1 28 0 1614 154 18 7 chr5 127705478 127705757 -71924393 + MER49 LTR ERV1 1 282 -641 1826 180 14 14 chr5 127705790 127706145 -71924005 + MER4D LTR ERV1 549 903 0 3357 181 47 21 chr5 127706273 127707020 -71923130 + LTR1B LTR ERV1 1 785 0 510 240 13 13 chr5 127707531 127707681 -71922469 - MER103 DNA DNA -13 153 4 720 259 39 5 chr5 127709573 127709778 -71920372 + MIR SINE MIR 15 226 -36 1702 223 122 32 chr5 127711632 127711863 -71918287 - L2 LINE L2 -2 3311 3102 252 0 0 0 chr5 127711863 127711891 -71918259 + (TG)n Simple_repeat Simple_repeat 1 28 0 1702 223 122 32 chr5 127711891 127712696 -71917454 - L2 LINE L2 -211 3102 2159 756 277 22 9 chr5 127712711 127712935 -71917215 - MIR SINE MIR -6 256 30 1504 209 32 22 chr5 127713197 127713566 -71916584 + MLT1A2 LTR MaLR 2 374 0 203 267 44 41 chr5 127714845 127714976 -71915174 - MIR SINE MIR -65 143 15 215 290 32 0 chr5 127714997 127715059 -71915091 - L2 LINE L2 -9 3263 3200 247 237 17 0 chr5 127715178 127715237 -71914913 - L2 LINE L2 -2 3270 3211 412 207 35 0 chr5 127715895 127715982 -71914168 - MER53 DNA DNA -4 185 96 773 311 49 4 chr5 127716124 127716349 -71913801 + MIR SINE MIR 1 235 -27 216 255 0 0 chr5 127716371 127716418 -71913732 + (TTG)n Simple_repeat Simple_repeat 1 47 0 202 298 19 58 chr5 127717577 127717681 -71912469 - MIR SINE MIR -66 142 43 420 290 55 14 chr5 127718540 127718685 -71911465 + MIR SINE MIR 18 168 -94 190 298 35 0 chr5 127718806 127718863 -71911287 + MIR SINE MIR 93 151 -111 425 287 200 15 chr5 127719006 127719201 -71910949 - MIR SINE MIR -1 261 31 439 211 33 11 chr5 127719721 127719811 -71910339 + MER94 DNA DNA 14 105 -29 331 271 16 45 chr5 127720913 127721064 -71909086 - L1ME LINE L1 -644 5477 5318 497 92 13 0 chr5 127721728 127721804 -71908346 + (CA)n Simple_repeat Simple_repeat 2 78 0 189 240 136 56 chr5 127722163 127722288 -71907862 + MIR SINE MIR 42 176 -86 * 712 216 62 36 chr5 127722285 127722479 -71907671 + MIR SINE MIR 17 215 -47 277 287 156 50 chr5 127722589 127722871 -71907279 - L2 LINE L2 -49 3264 2953 503 276 82 62 chr5 127722871 127723335 -71906815 + LTR16C LTR ERVL 7 479 -12 685 274 115 56 chr5 127723341 127723556 -71906594 - L2 LINE L2 -377 2937 2691 2197 113 0 0 chr5 127723556 127723865 -71906285 - AluY SINE Alu -2 309 1 685 274 115 56 chr5 127723865 127724006 -71906144 - L2 LINE L2 -623 2691 2560 376 271 110 72 chr5 127725217 127725634 -71904516 + L1MC4a LINE L1 5602 6034 -87 347 182 192 61 chr5 127725793 127725991 -71904159 - L1ME4a LINE L1 -115 6006 5783 181 250 13 92 chr5 127726083 127726159 -71903991 + L2 LINE L2 3203 3272 0 184 275 0 0 chr5 127726544 127726584 -71903566 + MIR SINE MIR 112 151 -57 1628 251 74 12 chr5 127726588 127727073 -71903077 - LTR33 LTR ERVL -4 517 3 969 326 62 6 chr5 127727271 127727624 -71902526 - ERVL LTR ERVL -1957 3807 3435 639 178 46 2 chr5 127727665 127727786 -71902364 - MER20 DNA MER1_type 0 219 88 1241 337 84 30 chr5 127727786 127728521 -71901629 - ERVL LTR ERVL -2376 3388 2614 1142 186 49 0 chr5 127728663 127728867 -71901283 - MER20 DNA MER1_type -4 215 2 1630 265 51 9 chr5 127729385 127729815 -71900335 - LTR33 LTR ERVL -20 501 54 265 325 0 0 chr5 127730152 127730232 -71899918 - MIR SINE MIR 0 262 183 2338 167 13 10 chr5 127730298 127730693 -71899457 + MSTD LTR MaLR 1 396 0 5946 147 26 16 chr5 127731406 127733062 -71897088 + L1PB4 LINE L1 4125 5797 -359 261 75 0 0 chr5 127733062 127733102 -71897048 + (CA)n Simple_repeat Simple_repeat 2 41 0 5946 147 26 16 chr5 127733102 127733459 -71896691 + L1PB4 LINE L1 5797 6149 -7 300 202 11 79 chr5 127733708 127733797 -71896353 - MIR3 SINE MIR -15 193 111 857 252 45 75 chr5 127735702 127736124 -71894026 + LTR16C LTR ERVL 1 491 0 495 223 0 0 chr5 127736758 127736852 -71893298 - MER58C DNA MER1_type 0 215 122 243 265 0 0 chr5 127736859 127736908 -71893242 + polypyrimidine Low_complexity Low_complexity 1 49 0 546 210 73 8 chr5 127736908 127737032 -71893118 - MER58C DNA MER1_type -83 132 1 231 279 54 63 chr5 127738708 127738819 -71891331 + L2 LINE L2 3202 3311 -2 319 321 38 33 chr5 127740361 127740545 -71889605 + MLT1K LTR MaLR 231 415 -173 230 307 20 10 chr5 127740563 127740664 -71889486 + MLT1L LTR MaLR 514 615 0 753 232 60 0 chr5 127743339 127743507 -71886643 - MER119 DNA MER1_type -405 178 1 798 294 100 26 chr5 127743551 127744022 -71886128 - L1MC/D LINE L1 -361 5760 5311 1066 226 115 12 chr5 127744026 127744510 -71885640 + MLT1F1 LTR MaLR 1 567 0 385 283 100 87 chr5 127744543 127744844 -71885306 - L1MC/D LINE L1 -1480 4666 4362 462 321 0 18 chr5 127744923 127745088 -71885062 + MIR SINE MIR 101 262 0 1297 177 67 7 chr5 127745717 127745999 -71884151 + MER33 DNA MER1_type 1 299 -25 746 280 183 24 chr5 127746682 127747260 -71882890 + L2 LINE L2 2652 3313 0 349 291 12 0 chr5 127747895 127747981 -71882169 + LTR16A1 LTR ERVL 72 158 -299 245 244 215 0 chr5 127747981 127748116 -71882034 - L2 LINE L2 -1291 2023 1860 273 281 264 8 chr5 127749210 127749331 -71880819 - MIR SINE MIR -110 152 1 405 0 0 0 chr5 127749441 127749486 -71880664 + (CA)n Simple_repeat Simple_repeat 2 46 0 213 291 27 55 chr5 127749488 127749598 -71880552 - MIR SINE MIR -71 137 31 288 70 0 0 chr5 127750517 127750560 -71879590 + (TTTAA)n Simple_repeat Simple_repeat 3 45 0 1520 108 33 0 chr5 127750560 127750773 -71879377 - AluSg SINE Alu -30 280 61 518 248 130 25 chr5 127753650 127753811 -71876339 + MER91A DNA MER1_type 19 196 0 2046 113 0 3 chr5 127754598 127754882 -71875268 - AluSx SINE Alu -29 283 1 2314 82 3 0 chr5 127754952 127755255 -71874895 - AluSc SINE Alu -5 304 1 181 238 0 24 chr5 127758286 127758328 -71871822 - L2 LINE L2 0 3272 3232 350 226 60 71 chr5 127758977 127759145 -71871005 - MLT1K LTR MaLR -5 583 418 332 267 26 35 chr5 127759207 127759323 -71870827 - MLT1K LTR MaLR -288 300 186 471 335 12 68 chr5 127759519 127759770 -71870380 - MIR SINE MIR -8 254 18 322 338 59 15 chr5 127759880 127760016 -71870134 + MIR3 SINE MIR 48 189 -19 933 276 118 19 chr5 127761566 127761982 -71868168 + LTR16A1 LTR ERVL 1 457 0 504 93 0 0 chr5 127762161 127762236 -71867914 + (TCCA)n Simple_repeat Simple_repeat 1 75 0 1399 205 42 3 chr5 127762986 127763274 -71866876 + AluJb SINE Alu 1 299 -13 567 241 32 114 chr5 127763297 127763517 -71866633 + MIR SINE MIR 58 259 -3 201 74 0 0 chr5 127763867 127763894 -71866256 + (A)n Simple_repeat Simple_repeat 1 27 0 4680 82 4 50 chr5 127765232 127765267 -71864883 + L1MA1 LINE L1 5633 5668 -634 2427 92 0 0 chr5 127765267 127765572 -71864578 + AluSg SINE Alu 1 305 -5 4680 82 4 50 chr5 127765572 127766234 -71863916 + L1MA1 LINE L1 5668 6298 -4 2079 125 3 3 chr5 127767690 127767987 -71862163 - AluSg SINE Alu -13 297 1 776 258 66 90 chr5 127768543 127768962 -71861188 - L1MC5 LINE L1 -42 7919 7520 2185 226 48 9 chr5 127768962 127769505 -71860645 + MLT1F1 LTR MaLR 1 564 -3 776 258 66 90 chr5 127769505 127769751 -71860399 - L1MC5 LINE L1 -441 7520 7270 180 218 91 18 chr5 127770096 127770151 -71859999 - L2 LINE L2 -8 3264 3206 637 256 143 5 chr5 127773673 127773876 -71856274 - MIR SINE MIR -4 258 28 306 0 0 0 chr5 127773909 127773943 -71856207 + (TG)n Simple_repeat Simple_repeat 2 35 0 204 179 0 0 chr5 127774292 127774331 -71855819 + T-rich Low_complexity Low_complexity 2 40 0 2718 215 40 22 chr5 127777936 127778616 -71851534 + L1ME2 LINE L1 4639 5330 -816 7644 235 48 19 chr5 127778619 127780785 -71849365 + L1M2a LINE L1 5 2146 -5022 1883 134 93 16 chr5 127780785 127781098 -71849052 - MER1B DNA MER1_type 0 337 1 7644 235 48 19 chr5 127781098 127781976 -71848174 + L1M2a LINE L1 2146 2997 -4171 559 219 0 23 chr5 127782000 127782128 -71848022 + L1ME2 LINE L1 5314 5438 -728 2337 98 0 10 chr5 127783475 127783782 -71846368 - AluSp SINE Alu -9 304 1 3160 213 32 16 chr5 127784727 127784791 -71845359 + L1ME2 LINE L1 5423 5484 -850 2121 114 44 3 chr5 127784791 127785089 -71845061 + AluSg SINE Alu 1 310 0 3160 213 32 16 chr5 127785089 127785762 -71844388 + L1ME2 LINE L1 5484 6333 -1 391 158 50 2 chr5 127785887 127785988 -71844162 - L1P1 LINE L1 -311 5844 5735 345 200 100 0 chr5 127786389 127786479 -71843671 + L2 LINE L2 3215 3313 0 344 241 11 11 chr5 127786524 127786611 -71843539 - MLT1I LTR MaLR 0 409 323 259 286 34 50 chr5 127786616 127786735 -71843415 - MLT1J2 LTR MaLR -331 119 3 27 62 0 0 chr5 127786758 127786806 -71843344 + AT_rich Low_complexity Low_complexity 1 48 0 374 322 58 46 chr5 127788442 127788703 -71841447 - L2 LINE L2 -2 3311 3048 668 312 64 8 chr5 127788715 127788949 -71841201 - MIR SINE MIR -14 248 2 2280 205 25 12 chr5 127789000 127789479 -71840671 - LTR16C LTR ERVL -3 488 4 960 280 206 13 chr5 127789480 127790077 -71840073 - L2 LINE L2 -344 2970 2259 213 65 0 0 chr5 127790684 127790715 -71839435 + (T)n Simple_repeat Simple_repeat 1 31 0 616 315 61 39 chr5 127790839 127791331 -71838819 - L1M4 LINE L1 -2125 4021 3519 728 287 108 45 chr5 127791448 127792505 -71837645 - L1M4 LINE L1 -2883 3263 2140 31 58 0 0 chr5 127792508 127792560 -71837590 + AT_rich Low_complexity Low_complexity 1 52 0 235 333 0 19 chr5 127792822 127792927 -71837223 + GA-rich Low_complexity Low_complexity 4 106 0 504 331 50 35 chr5 127793080 127793340 -71836810 - L2 LINE L2 -6 3266 3003 342 336 49 36 chr5 127793868 127793906 -71836244 + MIR SINE MIR 22 58 -204 2422 91 3 0 chr5 127793906 127794214 -71835936 - AluSx SINE Alu -3 309 1 342 336 49 36 chr5 127794214 127794398 -71835752 + MIR SINE MIR 58 247 -15 1263 252 91 45 chr5 127795869 127796353 -71833797 + L1MD2 LINE L1 5853 6358 -1 397 361 135 0 chr5 127796907 127797115 -71833035 + L3 LINE CR1 1253 1488 -89 365 263 45 26 chr5 127798114 127798275 -71831875 - MLT1J2 LTR MaLR -8 433 278 2365 246 129 6 chr5 127799841 127800853 -71829297 + L2 LINE L2 2185 3313 0 238 275 83 17 chr5 127803638 127803758 -71826392 + MLT1H-int LTR MaLR 1587 1714 -21 1455 258 101 14 chr5 127803779 127804282 -71825868 + MLT1H LTR MaLR 3 549 0 349 269 37 37 chr5 127804282 127804390 -71825760 - MIR SINE MIR -60 202 92 5095 36 3 0 chr5 127804390 127804979 -71825171 - LTR10C LTR ERV1 0 591 1 349 269 37 37 chr5 127804979 127805004 -71825146 - MIR SINE MIR -169 93 69 963 278 41 16 chr5 127805063 127805380 -71824770 + MLT1I LTR MaLR 85 409 0 199 304 0 18 chr5 127805380 127805436 -71824714 - MIR SINE MIR -189 73 19 1803 147 6 90 chr5 127805718 127806072 -71824078 - MER4A LTR ERV1 0 664 341 516 100 100 11 chr5 127806088 127806178 -71823972 - MER4A LTR ERV1 -566 98 1 223 263 178 17 chr5 127806596 127806714 -71823436 - L2 LINE L2 -10 3303 3167 372 22 0 0 chr5 127807510 127807555 -71822595 + (TG)n Simple_repeat Simple_repeat 2 46 0 182 247 56 56 chr5 127807575 127807664 -71822486 + L2 LINE L2 3206 3294 -19 555 270 137 33 chr5 127807821 127808158 -71821992 - L2 LINE L2 -8 3305 2934 245 305 18 0 chr5 127810599 127810692 -71819458 + MIR SINE MIR 36 132 -76 377 238 9 121 chr5 127810721 127810852 -71819298 - L2 LINE L2 0 3313 3216 1255 114 33 9 chr5 127810852 127811062 -71819088 - L1MA8 LINE L1 -4 6287 6073 377 238 9 121 chr5 127811062 127811153 -71818997 - L2 LINE L2 -97 3216 3116 * 1935 253 23 54 chr5 127811152 127811816 -71818334 - L2 LINE L2 -609 2705 2063 400 212 17 0 chr5 127811836 127811936 -71818214 + ERVL LTR ERVL 4423 4552 -960 1563 183 138 21 chr5 127811975 127812358 -71817792 - MER68 LTR ERV1 -134 428 1 247 194 161 0 chr5 127813144 127813206 -71816944 - L2 LINE L2 0 3272 3201 343 241 17 60 chr5 127813785 127813901 -71816249 - MIR SINE MIR -69 139 28 201 138 0 0 chr5 127814048 127814077 -71816073 + (CAGG)n Simple_repeat Simple_repeat 2 30 0 180 317 0 0 chr5 127817290 127817331 -71812819 + MIR SINE MIR 70 110 -152 615 262 30 103 chr5 127819111 127819374 -71810776 + MIR SINE MIR 9 252 -10 211 326 63 42 chr5 127819577 127819672 -71810478 - MIR SINE MIR -108 154 58 209 301 70 21 chr5 127819881 127820024 -71810126 - L2 LINE L2 -253 3019 2870 309 278 74 28 chr5 127820276 127820384 -71809766 - L2 LINE L2 -27 3286 3174 951 277 70 43 chr5 127820652 127821051 -71809099 - MLT1J LTR MaLR -15 496 80 2223 110 0 13 chr5 127821051 127821350 -71808800 + AluSx SINE Alu 1 295 -17 951 277 70 43 chr5 127821350 127821433 -71808717 - MLT1J LTR MaLR -431 80 1 2132 117 3 0 chr5 127822704 127823022 -71807128 + AluSq SINE Alu 1 319 0 373 315 119 46 chr5 127824827 127825356 -71804794 - L2 LINE L2 -20 3293 2683 391 283 130 90 chr5 127825649 127826003 -71804147 + L2 LINE L2 2904 3271 -1 794 156 7 0 chr5 127826562 127826697 -71803453 - MSTD LTR MaLR 0 396 261 * 1508 224 23 20 chr5 127826638 127826991 -71803159 - MLT2B3 LTR ERVL -197 357 4 510 256 15 15 chr5 127827337 127827470 -71802680 - L2 LINE L2 -3 3269 3137 1624 165 113 40 chr5 127827584 127827930 -71802220 - MLT1A2 LTR MaLR 0 374 4 187 295 13 26 chr5 127829488 127829566 -71800584 + L2 LINE L2 3194 3270 -2 373 239 163 65 chr5 127831284 127831468 -71798682 + MIR SINE MIR 1 202 -60 180 264 42 28 chr5 127831535 127831607 -71798543 + MIR SINE MIR 178 250 -12 403 299 157 0 chr5 127832333 127832467 -71797683 - MIR SINE MIR -19 243 89 2517 69 0 0 chr5 127832524 127832829 -71797321 + AluY SINE Alu 1 305 -6 442 103 86 78 chr5 127833042 127833403 -71796747 + (CACAC)n Simple_repeat Simple_repeat 1 363 0 261 244 61 12 chr5 127833645 127833727 -71796423 + MIR SINE MIR 105 190 -72 2209 129 0 0 chr5 127834045 127834355 -71795795 + AluSx SINE Alu 1 310 -2 384 40 0 0 chr5 127834385 127834435 -71795715 + (CA)n Simple_repeat Simple_repeat 2 51 0 211 303 13 13 chr5 127834823 127834899 -71795251 + MIR SINE MIR 173 248 -14 2177 119 0 3 chr5 127837981 127838283 -71791867 - AluSg1 SINE Alu -8 301 1 402 74 0 0 chr5 127838763 127838817 -71791333 + (CA)n Simple_repeat Simple_repeat 2 55 0 397 343 91 10 chr5 127839030 127839228 -71790922 + MIR SINE MIR 49 262 0 187 329 29 14 chr5 127840931 127841001 -71789149 + L2 LINE L2 3242 3312 -1 432 210 14 21 chr5 127841003 127841146 -71789004 + GA-rich Low_complexity Low_complexity 3 144 0 447 193 73 28 chr5 127841812 127841921 -71788229 + L2 LINE L2 3183 3296 -17 405 221 58 0 chr5 127843285 127843389 -71786761 - MER94 DNA DNA -7 127 18 386 223 192 31 chr5 127844800 127844930 -71785220 - MIR SINE MIR -34 228 78 456 277 38 7 chr5 127845334 127845518 -71784632 + MIR SINE MIR 2 227 -35 24 77 0 0 chr5 127846095 127846147 -71784003 + AT_rich Low_complexity Low_complexity 1 52 0 233 229 21 0 chr5 127847408 127847456 -71782694 + L2 LINE L2 3254 3302 -11 223 258 34 67 chr5 127847674 127847763 -71782387 + L2 LINE L2 3223 3308 -5 5889 197 110 32 chr5 127848946 127850423 -71779727 - L1MDa LINE L1 -4930 1610 19 2113 123 3 0 chr5 127851252 127851560 -71778590 + AluSx SINE Alu 1 309 0 408 255 57 0 chr5 127851763 127851869 -71778281 + L2 LINE L2 3161 3272 0 283 348 34 34 chr5 127852153 127852271 -71777879 + L2 LINE L2 3155 3272 0 857 246 41 5 chr5 127852278 127852473 -71777677 + MIR SINE MIR 60 261 -1 602 221 69 0 chr5 127852644 127852775 -71777375 - MIR SINE MIR -86 176 37 610 211 24 36 chr5 127852980 127853146 -71777004 + L2 LINE L2 1792 1955 -1359 482 245 14 42 chr5 127853150 127853293 -71776857 - L2 LINE L2 -2 3311 3173 * 2459 240 94 78 chr5 127853276 127853647 -71776503 + L2 LINE L2 1958 2321 -992 464 119 15 0 chr5 127853647 127853750 -71776400 + AluSg/x SINE Alu 216 319 0 2459 240 94 78 chr5 127853750 127854558 -71775592 + L2 LINE L2 2321 3229 -84 243 244 12 24 chr5 127854561 127854643 -71775507 - L1ME LINE L1 -208 5913 5833 1526 103 27 0 chr5 127854734 127854958 -71775192 - L1PA8 LINE L1 0 6172 5943 496 77 13 0 chr5 127854959 127855037 -71775113 + L1PA8 LINE L1 5876 5954 -200 254 342 13 0 chr5 127855044 127855120 -71775030 + L2 LINE L2 3221 3297 -16 496 230 52 15 chr5 127856767 127856902 -71773248 + MER91C DNA MER1_type 1 140 0 247 60 40 20 chr5 127857001 127857051 -71773099 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 353 275 34 27 chr5 127857378 127857527 -71772623 + L1ME4a LINE L1 5669 5818 -303 577 164 12 35 chr5 127857562 127857733 -71772417 + CT-rich Low_complexity Low_complexity 2 168 0 639 290 39 84 chr5 127857747 127858257 -71771893 + LTR67 LTR ERVL 31 517 -40 1033 306 70 20 chr5 127858286 127858741 -71771409 + Tigger8 DNA MER2_type 5 482 -184 320 286 33 52 chr5 127858820 127859033 -71771117 + L1ME4a LINE L1 5818 6026 -95 183 321 99 53 chr5 127859051 127859182 -71770968 - L3 LINE CR1 -853 724 588 209 349 40 13 chr5 127859220 127859369 -71770781 + MIR3 SINE MIR 33 185 -23 528 244 67 48 chr5 127860474 127860683 -71769467 + LTR33 LTR ERVL 3 215 -306 1154 298 109 9 chr5 127861256 127861314 -71768836 - L2 LINE L2 -1 3312 3261 782 275 135 52 chr5 127861314 127861780 -71768370 + MLT1D LTR MaLR 1 505 0 1154 298 109 9 chr5 127861780 127862580 -71767570 - L2 LINE L2 -52 3261 2368 2277 111 73 14 chr5 127863603 127863947 -71766203 + THE1B LTR MaLR 1 364 0 10378 186 43 29 chr5 127864473 127865641 -71764509 - L1MC1 LINE L1 -5 6328 5179 2675 142 26 21 chr5 127865641 127866071 -71764079 - MSTB1 LTR MaLR 0 432 1 10378 186 43 29 chr5 127866071 127867406 -71762744 - L1MC1 LINE L1 -1154 5179 3713 234 119 0 0 chr5 127867406 127867448 -71762702 - Alu SINE Alu -2 306 265 10378 186 43 29 chr5 127867448 127868502 -71761648 - L1MC1 LINE L1 -2620 3713 2676 6333 176 75 30 chr5 127869256 127870182 -71759968 + L1MD1 LINE L1 831 1847 -4693 1701 186 6 13 chr5 127870182 127870494 -71759656 + AluJb SINE Alu 1 310 -2 6333 176 75 30 chr5 127870494 127871011 -71759139 + L1MD1 LINE L1 1847 2339 -4201 15449 81 5 4 chr5 127871011 127873862 -71756288 - L1PA7 LINE L1 -1 6153 3301 3935 78 14 0 chr5 127873862 127874375 -71755775 + L1P LINE L1 3817 4336 -1810 2766 90 36 34 chr5 127874403 127874510 -71755640 - L1PA7 LINE L1 -2850 3296 3191 2167 117 3 10 chr5 127874510 127874840 -71755310 + AluSp SINE Alu 1 313 0 2766 90 36 34 chr5 127874840 127875198 -71754952 - L1PA7 LINE L1 -2955 3191 2830 3046 193 51 49 chr5 127875198 127875625 -71754525 + L1MD1 LINE L1 2328 2753 -3787 1946 137 62 45 chr5 127875625 127875983 -71754167 + THE1B LTR MaLR 1 364 0 3046 193 51 49 chr5 127875983 127876668 -71753482 + L1MD1 LINE L1 2753 3431 -3109 659 190 15 29 chr5 127876668 127876805 -71753345 + AluJb SINE Alu 2 136 -176 711 33 17 134 chr5 127876833 127877445 -71752705 + (TA)n Simple_repeat Simple_repeat 1 540 0 2116 240 57 24 chr5 127877457 127878565 -71751585 + L1MD1 LINE L1 3446 5254 -1286 4252 180 73 14 chr5 127878573 127879992 -71750158 - L1MB5 LINE L1 -11 6163 4654 4635 166 73 51 chr5 127879994 127881345 -71748805 + L1MD1 LINE L1 5243 6622 -14 195 42 0 0 chr5 127881385 127881409 -71748741 + (TTTTTA)n Simple_repeat Simple_repeat 5 28 0 4148 109 12 34 chr5 127881410 127881741 -71748409 - L1PB1 LINE L1 -3 6148 5836 2520 77 0 0 chr5 127881741 127882051 -71748099 - AluY SINE Alu -1 310 1 4148 109 12 34 chr5 127882051 127882373 -71747777 - L1PB1 LINE L1 -315 5836 5509 25 51 0 0 chr5 127883126 127883165 -71746985 + AT_rich Low_complexity Low_complexity 1 39 0 357 259 159 69 chr5 127883752 127883941 -71746209 - MLT1L LTR MaLR -19 524 287 442 327 187 0 chr5 127884381 127884595 -71745555 + MIR SINE MIR 1 254 -8 360 269 87 72 chr5 127884665 127884831 -71745319 + L2 LINE L2 2632 2794 -520 1596 143 70 40 chr5 127884831 127885160 -71744990 + MER44D DNA MER2_type 1 609 0 360 269 87 72 chr5 127885160 127885328 -71744822 + L2 LINE L2 2794 2971 -343 2431 92 0 3 chr5 127885847 127886151 -71743999 - AluSc SINE Alu -6 303 1 1991 143 3 7 chr5 127886477 127886778 -71743372 + AluJb SINE Alu 11 310 -2 405 0 0 0 chr5 127886814 127886859 -71743291 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 319 339 9 0 chr5 127889380 127889489 -71740661 - MIR3 SINE MIR -53 155 46 218 197 0 98 chr5 127889522 127889583 -71740567 + L2 LINE L2 3234 3288 -25 181 314 39 10 chr5 127894640 127894742 -71735408 + MIR SINE MIR 33 137 -71 189 107 0 0 chr5 127895237 127895265 -71734885 + (TCCC)n Simple_repeat Simple_repeat 4 31 0 650 263 34 34 chr5 127895566 127895802 -71734348 + MIR SINE MIR 17 252 -10 2258 107 3 0 chr5 127896750 127897048 -71733102 + AluSp SINE Alu 1 299 -14 200 250 50 17 chr5 127898100 127898160 -71731990 + L2 LINE L2 3241 3302 -11 2191 112 0 7 chr5 127898449 127898744 -71731406 - AluSx SINE Alu -19 293 1 462 246 209 16 chr5 127898911 127899098 -71731052 - MIR SINE MIR -9 253 31 23 0 0 0 chr5 127899672 127899695 -71730455 + AT_rich Low_complexity Low_complexity 1 23 0 1906 168 0 7 chr5 127901187 127901497 -71728653 + AluJb SINE Alu 3 310 -2 2269 152 0 8 chr5 127902759 127903128 -71727022 - MER47A DNA MER2_type 0 366 1 184 121 446 12 chr5 127904800 127904883 -71725267 + MER5A DNA MER1_type 48 166 -23 * 285 188 150 25 chr5 127904820 127904900 -71725250 - MER5A DNA MER1_type -80 109 20 282 209 90 15 chr5 127907676 127907743 -71722407 + L2 LINE L2 3200 3271 -1 2254 95 7 7 chr5 127908677 127908971 -71721179 + AluSx SINE Alu 1 294 -18 237 182 18 18 chr5 127909148 127909203 -71720947 - L2 LINE L2 -10 3262 3208 2392 163 24 2 chr5 127910214 127910637 -71719513 - MSTB1 LTR MaLR 0 432 1 1076 184 79 44 chr5 127912100 127912446 -71717704 + MSTD LTR MaLR 1 396 0 308 105 0 123 chr5 127912988 127913076 -71717074 + Alu SINE Alu 232 312 0 432 342 43 0 chr5 127913186 127913373 -71716777 - MIR SINE MIR -65 197 3 43856 29 24 1 chr5 127913870 127919881 -71710269 - L1HS LINE L1 0 6155 4 247 214 14 29 chr5 127920801 127920871 -71709279 - MIR SINE MIR -58 150 82 707 179 14 7 chr5 127921335 127921475 -71708675 - MER5B DNA MER1_type 0 178 38 204 229 71 0 chr5 127921738 127921808 -71708342 - MIR SINE MIR -70 192 118 440 307 12 45 chr5 127922509 127922753 -71707397 + L2 LINE L2 3017 3252 -61 1326 131 37 14 chr5 127925247 127925484 -71704666 - AluJb SINE Alu 0 306 65 368 282 31 37 chr5 127927673 127927836 -71702314 - MIR SINE MIR -20 242 81 1227 275 62 4 chr5 127928094 127928597 -71701553 - L1ME3A LINE L1 -5 6960 6417 249 255 59 10 chr5 127928597 127928699 -71701451 - LTR33A LTR ERVL -19 504 398 265 167 205 39 chr5 127928746 127928824 -71701326 - LTR50 LTR ERVL -315 480 390 1032 261 65 12 chr5 127928824 127929318 -71700832 - L1ME3A LINE L1 -636 6325 5738 1222 255 86 34 chr5 127929334 127929898 -71700252 - L1ME3A LINE L1 -3388 3553 2955 2328 113 0 0 chr5 127929898 127930209 -71699941 - AluY SINE Alu 0 311 1 1222 255 86 34 chr5 127930209 127930236 -71699914 - L1ME3A LINE L1 -3986 2955 2931 1027 273 59 63 chr5 127930552 127930785 -71699365 - L1MCc LINE L1 -4604 2518 2286 720 116 66 16 chr5 127930785 127930906 -71699244 + L1PA15 LINE L1 6038 6164 -1 1027 273 59 63 chr5 127930906 127931474 -71698676 - L1MCc LINE L1 -4836 2286 1504 866 85 54 0 chr5 127931474 127931603 -71698547 - L1PB1 LINE L1 -2 6149 6014 1027 273 59 63 chr5 127931603 127931833 -71698317 - L1MCc LINE L1 -5618 1504 1275 238 297 72 0 chr5 127932387 127932498 -71697652 - L1MCc LINE L1 -5921 1010 892 263 257 78 36 chr5 127932597 127932724 -71697426 + MIR SINE MIR 24 156 -52 891 108 0 0 chr5 127932724 127932844 -71697306 + AluSg/x SINE Alu 176 295 -17 412 286 50 75 chr5 127932845 127932941 -71697209 + L1M4 LINE L1 3559 3656 -2490 2499 57 7 0 chr5 127932941 127933242 -71696908 - AluY SINE Alu -6 305 3 412 286 50 75 chr5 127933242 127933544 -71696606 + L1M4 LINE L1 3656 3947 -2199 267 256 194 31 chr5 127933556 127933685 -71696465 - L2 LINE L2 -5 3308 3159 578 320 75 23 chr5 127933795 127934351 -71695799 + L1M4 LINE L1 4035 4619 -1527 1183 201 39 83 chr5 127938852 127939260 -71690890 + MLT1B LTR MaLR 1 390 0 205 186 257 29 chr5 127941370 127941440 -71688710 + MIR SINE MIR 73 158 -104 2193 80 0 11 chr5 127942030 127942370 -71687780 - AluY SINE Alu 0 337 1 1952 112 22 7 chr5 127942511 127942780 -71687370 + AluSg SINE Alu 1 273 -37 353 237 52 0 chr5 127945287 127945384 -71684766 - MLT1K LTR MaLR 0 588 487 196 256 98 12 chr5 127945921 127946003 -71684147 - MIR SINE MIR -127 135 47 1716 102 0 4 chr5 127946506 127946731 -71683419 - AluSx SINE Alu -88 224 1 405 238 12 49 chr5 127947618 127947834 -71682316 - MIR SINE MIR -44 218 18 277 248 70 78 chr5 127949116 127949245 -71680905 - MIR SINE MIR -60 148 21 684 230 20 122 chr5 127950499 127950803 -71679347 + Charlie8 DNA MER1_type 4 276 -2141 241 250 0 0 chr5 127950900 127950948 -71679202 + Charlie8 DNA MER1_type 2370 2417 0 21 0 0 0 chr5 127951534 127951555 -71678595 + AT_rich Low_complexity Low_complexity 1 21 0 444 255 47 68 chr5 127952479 127952671 -71677479 + MIR SINE MIR 75 262 0 1236 288 125 50 chr5 127952914 127954286 -71675864 + L1MEd LINE L1 96 1611 -4785 348 255 82 31 chr5 127954358 127954672 -71675478 - L1MEc LINE L1 -5107 1128 804 1136 258 46 98 chr5 127954773 127955254 -71674896 - MER21B LTR ERV1 -149 714 259 1100 195 137 70 chr5 127955296 127955711 -71674439 - MSTB2 LTR MaLR 0 457 15 3817 237 109 61 chr5 127955714 127956643 -71673507 - MLT-int LTR MaLR 0 1735 572 2413 104 3 0 chr5 127956643 127956950 -71673200 - AluSx SINE Alu -4 308 1 3817 237 109 61 chr5 127956950 127957551 -71672599 - MLT-int LTR MaLR -1163 572 2 1328 220 97 50 chr5 127957553 127957975 -71672175 - MSTB2 LTR MaLR -2 455 14 274 219 16 16 chr5 127958012 127958076 -71672074 - MER21B LTR ERV1 -667 196 133 31 0 0 0 chr5 127958985 127959016 -71671134 + AT_rich Low_complexity Low_complexity 1 31 0 511 304 66 11 chr5 127959287 127959780 -71670370 + L1MEd LINE L1 2134 2611 -3604 1754 158 4 4 chr5 127959823 127960095 -71670055 + AluJo SINE Alu 1 272 -40 1212 272 81 55 chr5 127960101 127961042 -71669108 + L1MEd LINE L1 3097 4061 -2154 1388 241 99 13 chr5 127961070 127961224 -71668926 + L1MC4a LINE L1 6448 6587 -1221 219 36 0 0 chr5 127961224 127961252 -71668898 + (TG)n Simple_repeat Simple_repeat 2 29 0 1388 241 99 13 chr5 127961252 127961550 -71668600 + L1MC4a LINE L1 6587 6939 -869 1057 234 193 60 chr5 127961550 127962068 -71668082 + MLT1G1 LTR MaLR 1 587 -8 267 317 12 0 chr5 127962443 127962525 -71667625 + MLT1G1-int LTR MaLR 480 562 -809 1756 164 49 78 chr5 127962851 127962907 -71667243 - MLT2D LTR ERVL 0 414 358 246 62 0 0 chr5 127962907 127962939 -71667211 + (TG)n Simple_repeat Simple_repeat 2 33 0 1756 164 49 78 chr5 127962939 127963308 -71666842 - MLT2D LTR ERVL -56 358 1 319 232 113 123 chr5 127963629 127963922 -71666228 + MLT1G1-int LTR MaLR 1081 1370 -1 827 235 121 77 chr5 127963925 127964470 -71665680 + MLT1G1 LTR MaLR 3 553 -2 2314 205 105 22 chr5 127964474 127965258 -71664892 + L1MC4 LINE L1 7022 7913 -129 284 207 0 12 chr5 127965264 127965346 -71664804 + (TA)n Simple_repeat Simple_repeat 2 82 0 231 61 0 0 chr5 127965345 127965378 -71664772 + (TG)n Simple_repeat Simple_repeat 2 34 0 * 488 144 128 16 chr5 127965382 127965507 -71664643 + L1MC4 LINE L1 7902 8040 -2 812 267 143 23 chr5 127965533 127966050 -71664100 + L1ME3A LINE L1 4097 4675 -1471 675 311 21 14 chr5 127966083 127966363 -71663787 + L1ME3A LINE L1 5532 5813 -357 352 225 9 36 chr5 127966401 127966512 -71663638 + L1ME3A LINE L1 5795 5902 -268 22 35 0 0 chr5 127966605 127966634 -71663516 + AT_rich Low_complexity Low_complexity 1 29 0 356 290 108 36 chr5 127966634 127967024 -71663126 + L1ME4a LINE L1 5693 6110 -11 200 281 115 21 chr5 127967123 127967219 -71662931 - L2 LINE L2 -19 3253 3149 1557 250 13 29 chr5 127967374 127967447 -71662703 - MLT1A2 LTR MaLR 0 374 301 3405 106 45 4 chr5 127967447 127967938 -71662212 - MER9 LTR ERVK 0 511 1 1557 250 13 29 chr5 127967938 127968244 -71661906 - MLT1A2 LTR MaLR -73 301 1 477 175 48 10 chr5 127969064 127969167 -71660983 + MSTD LTR MaLR 290 396 0 563 106 21 163 chr5 127969566 127969630 -71660520 - MLT1D LTR MaLR -4 501 466 1695 197 0 7 chr5 127969630 127969934 -71660216 + AluSx SINE Alu 1 302 -10 563 106 21 163 chr5 127969934 127970010 -71660140 - MLT1D LTR MaLR -39 466 381 1425 209 76 0 chr5 127970913 127971243 -71658907 - MLT1D LTR MaLR -145 360 6 386 271 33 0 chr5 127973551 127973673 -71656477 + MIR SINE MIR 116 241 -21 899 233 112 51 chr5 127973950 127974324 -71655826 - MLT1J1 LTR MaLR -11 435 39 237 33 0 0 chr5 127975673 127975703 -71654447 + (TG)n Simple_repeat Simple_repeat 2 31 0 209 300 0 0 chr5 127977195 127977245 -71652905 + L2 LINE L2 3247 3296 -17 241 287 73 59 chr5 127977303 127977439 -71652711 + MIR3 SINE MIR 10 147 -61 469 282 77 47 chr5 127978869 127979318 -71650832 + L2 LINE L2 2745 3210 -103 214 302 181 63 chr5 127979468 127979673 -71650477 - MIR SINE MIR -14 248 20 1555 194 62 28 chr5 127979820 127980175 -71649975 - MLT1B LTR MaLR 0 390 24 204 374 49 40 chr5 127980647 127980971 -71649179 + L3b LINE CR1 1105 1431 -152 304 233 58 50 chr5 127981599 127981719 -71648431 - L2 LINE L2 0 3272 3152 261 232 121 50 chr5 127981740 127981839 -71648311 - MLT1K LTR MaLR -24 564 459 325 268 110 62 chr5 127981908 127982117 -71648033 - MLT1K LTR MaLR -341 247 29 222 192 0 39 chr5 127983064 127983116 -71647034 + A-rich Low_complexity Low_complexity 5 54 0 21 0 0 0 chr5 127984374 127984395 -71645755 + AT_rich Low_complexity Low_complexity 1 21 0 623 250 88 57 chr5 127984481 127985045 -71645105 - L1ME LINE L1 -422 5699 5122 2130 194 6 56 chr5 127985094 127985541 -71644609 + MLT2C2 LTR ERVL 5 428 -36 225 0 0 0 chr5 127985541 127985566 -71644584 + (CA)n Simple_repeat Simple_repeat 2 26 0 2130 194 6 56 chr5 127985566 127985602 -71644548 + MLT2C2 LTR ERVL 428 464 0 383 0 21 0 chr5 127985663 127985710 -71644440 + (TG)n Simple_repeat Simple_repeat 1 48 0 2257 127 0 0 chr5 127985726 127986034 -71644116 - AluSx SINE Alu -4 308 1 933 150 7 0 chr5 127986086 127986226 -71643924 - FRAM SINE Alu -18 158 18 331 288 176 15 chr5 127986242 127986971 -71643179 - L1ME LINE L1 -1178 4968 4123 201 255 0 0 chr5 127987376 127987427 -71642723 - L2 LINE L2 0 3313 3263 872 201 0 18 chr5 127987756 127987925 -71642225 - FRAM SINE Alu 0 166 1 436 293 86 59 chr5 127988160 127988672 -71641478 - HAL1b LINE L1 -723 625 100 2330 67 0 3 chr5 127988945 127989274 -71640876 - AluY SINE Alu 0 328 1 2082 120 7 13 chr5 127990053 127990354 -71639796 + AluSx SINE Alu 3 301 -11 779 244 34 6 chr5 127992927 127993158 -71636992 + MIR SINE MIR 27 262 0 757 181 8 0 chr5 127994429 127994555 -71635595 + MER2 DNA MER2_type 29 155 -190 1056 210 6 0 chr5 127994555 127994736 -71635414 + Tigger3(Golem) DNA MER2_type 2 183 -2846 432 262 128 0 chr5 127994923 127995064 -71635086 - MIR SINE MIR -5 257 99 294 210 12 111 chr5 127995148 127995229 -71634921 + Tigger3(Golem) DNA MER2_type 2957 3029 0 243 273 75 53 chr5 127995229 127995349 -71634801 + MER2 DNA MER2_type 157 284 -61 2356 91 0 0 chr5 127995349 127995646 -71634504 + AluSc SINE Alu 1 297 -12 243 273 75 53 chr5 127995646 127995710 -71634440 + MER2 DNA MER2_type 284 345 0 26 50 0 0 chr5 127995887 127995927 -71634223 + AT_rich Low_complexity Low_complexity 1 40 0 2070 108 22 0 chr5 127995934 127996240 -71633910 - AluSx SINE Alu 0 312 1 282 175 16 32 chr5 127996347 127996410 -71633740 - L2 LINE L2 -4 3309 3248 274 299 31 107 chr5 127998229 127998453 -71631697 - L2 LINE L2 -92 3180 2974 616 343 84 29 chr5 127998514 127998987 -71631163 - L2 LINE L2 -445 2869 2345 2530 96 19 19 chr5 127998987 127999362 -71630788 + THE1C LTR MaLR 1 375 0 616 343 84 29 chr5 127999362 127999576 -71630574 - L2 LINE L2 -969 2345 2144 472 240 80 50 chr5 127999715 127999915 -71630235 - MER63A DNA MER1_type 0 210 5 861 233 54 36 chr5 128000116 128000309 -71629841 - MLT1E2 LTR MaLR 0 626 438 2611 128 39 7 chr5 128000309 128000724 -71629426 - MSTA LTR MaLR 0 428 1 861 233 54 36 chr5 128000724 128000942 -71629208 - MLT1E2 LTR MaLR -188 438 137 1855 190 53 56 chr5 128000967 128001435 -71628715 - MLT1C LTR MaLR 0 467 1 305 213 229 49 chr5 128001436 128001558 -71628592 - MLT1E2 LTR MaLR -510 144 1 423 0 0 0 chr5 128003793 128003840 -71626310 + (TG)n Simple_repeat Simple_repeat 2 48 0 243 0 0 0 chr5 128004184 128004211 -71625939 + (TG)n Simple_repeat Simple_repeat 2 28 0 2035 139 3 7 chr5 128004478 128004773 -71625377 - AluSg SINE Alu -16 294 1 452 247 105 56 chr5 128005770 128005997 -71624153 - MIR SINE MIR -4 258 20 569 227 39 0 chr5 128009040 128009168 -71620982 + MIR SINE MIR 104 236 -26 329 288 101 107 chr5 128009377 128009762 -71620388 + L1MEd LINE L1 59 441 -5678 885 256 82 55 chr5 128009772 128010335 -71619815 + L1MEd LINE L1 511 1088 -5031 326 298 21 35 chr5 128010409 128010550 -71619600 + L1MEd LINE L1 1165 1303 -5007 354 275 70 0 chr5 128010584 128010726 -71619424 + HAL1 LINE L1 1441 1592 -915 24 0 0 0 chr5 128011274 128011298 -71618852 + AT_rich Low_complexity Low_complexity 1 24 0 553 296 145 38 chr5 128011405 128011504 -71618646 + L1MEd LINE L1 2204 2291 -3838 2491 72 0 10 chr5 128011504 128011811 -71618339 + AluY SINE Alu 1 304 -7 553 296 145 38 chr5 128011811 128012080 -71618070 + L1MEd LINE L1 2291 2530 -3599 1334 145 9 18 chr5 128012080 128012308 -71617842 - L1PA15 LINE L1 0 6165 5940 553 296 145 38 chr5 128012308 128012870 -71617280 + L1MEd LINE L1 2530 3235 -2894 218 259 74 0 chr5 128012871 128012952 -71617198 - MIR SINE MIR -19 243 157 2134 125 3 0 chr5 128014653 128014941 -71615209 + AluSx SINE Alu 1 289 -23 268 287 154 28 chr5 128015124 128015267 -71614883 + MIR3 SINE MIR 42 202 -6 258 236 112 22 chr5 128015262 128015351 -71614799 - MIR SINE MIR -67 141 45 * 273 335 124 31 chr5 128015556 128015750 -71614400 - MIR SINE MIR -6 256 45 401 209 183 20 chr5 128016260 128016361 -71613789 + MIR SINE MIR 39 154 -62 464 330 0 0 chr5 128016809 128017067 -71613083 + CT-rich Low_complexity Low_complexity 1 258 0 194 296 51 20 chr5 128018323 128018421 -71611729 - MIR SINE MIR -45 217 117 2559 113 11 8 chr5 128019889 128020252 -71609898 - THE1B LTR MaLR 0 364 1 616 271 0 0 chr5 128021439 128021583 -71608567 + L2 LINE L2 3170 3313 0 2145 136 7 3 chr5 128021652 128021954 -71608196 - AluSx SINE Alu -9 303 1 715 184 0 0 chr5 128022915 128023040 -71607110 - MIR SINE MIR -105 157 33 1576 226 65 20 chr5 128023342 128023785 -71606365 - L1MB8 LINE L1 0 6178 5716 403 335 99 16 chr5 128023920 128024102 -71606048 - L2 LINE L2 -13 3300 3104 579 256 97 31 chr5 128025597 128025824 -71604326 + MIR SINE MIR 18 259 -3 2189 136 41 22 chr5 128029182 128029549 -71600601 + THE1C LTR MaLR 1 374 -1 293 250 51 87 chr5 128030275 128030471 -71599679 + MIR3 SINE MIR 19 207 -1 566 256 34 11 chr5 128030842 128031018 -71599132 - HAL1 LINE L1 -767 1740 1561 338 291 103 30 chr5 128031018 128031183 -71598967 - MLT1J2 LTR MaLR -2 448 272 388 252 71 0 chr5 128031382 128031509 -71598641 - HAL1 LINE L1 -942 1565 1430 2106 154 31 6 chr5 128031509 128031865 -71598285 - MLT1A1 LTR MaLR 0 365 1 189 246 262 0 chr5 128031883 128031944 -71598206 + L2 LINE L2 3199 3275 -38 615 167 145 0 chr5 128031947 128032085 -71598065 - MER96B DNA MER1_type? 0 417 260 961 309 85 82 chr5 128032089 128032395 -71597755 - HAL1 LINE L1 -1080 1427 1123 2234 102 0 0 chr5 128032395 128032752 -71597398 - AluSq SINE Alu 0 357 1 961 309 85 82 chr5 128032752 128033159 -71596991 - HAL1 LINE L1 -1384 1123 711 216 286 29 105 chr5 128033623 128033833 -71596317 + L2 LINE L2 2309 2502 -812 273 114 0 0 chr5 128034166 128034210 -71595940 - MADE1 DNA Mariner -2 78 35 215 288 135 59 chr5 128035548 128035770 -71594380 + L2 LINE L2 2520 2758 -556 579 222 0 0 chr5 128035918 128036344 -71593806 + (CA)n Simple_repeat Simple_repeat 1 426 0 258 348 73 39 chr5 128036418 128036596 -71593554 + L2 LINE L2 3127 3310 -3 2546 57 0 0 chr5 128036654 128036953 -71593197 - AluY SINE Alu -12 299 1 738 233 260 7 chr5 128039740 128040032 -71590118 - MER31B LTR ERV1 -100 366 1 274 258 86 31 chr5 128040536 128040664 -71589486 - MLT1L LTR MaLR -338 277 143 252 0 0 0 chr5 128041640 128041668 -71588482 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 501 257 88 23 chr5 128042363 128042534 -71587616 - MIR3 SINE MIR -6 202 21 2753 71 41 6 chr5 128042920 128043284 -71586866 - MER51B LTR ERV1 0 377 1 21 36 0 0 chr5 128043695 128043723 -71586427 + AT_rich Low_complexity Low_complexity 1 28 0 180 235 59 0 chr5 128044555 128044606 -71585544 - MIR SINE MIR -115 147 94 192 152 0 0 chr5 128046065 128046098 -71584052 + T-rich Low_complexity Low_complexity 1 33 0 306 0 0 0 chr5 128046487 128046521 -71583629 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 374 272 73 0 chr5 128048153 128048289 -71581861 - L2 LINE L2 -1 3312 3167 258 32 0 0 chr5 128049912 128049943 -71580207 + (ATG)n Simple_repeat Simple_repeat 3 33 0 249 108 0 0 chr5 128050117 128050154 -71579996 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 189 105 79 26 chr5 128050155 128050193 -71579957 - L2 LINE L2 -24 3289 3250 214 342 40 0 chr5 128050196 128050272 -71579878 + MIR SINE MIR 54 132 -130 958 231 43 5 chr5 128050489 128050697 -71579453 + MIR SINE MIR 47 262 0 197 292 108 60 chr5 128051047 128051232 -71578918 + L2 LINE L2 3027 3220 -52 215 224 17 35 chr5 128051441 128051499 -71578651 + MIR SINE MIR 90 146 -62 2285 116 0 0 chr5 128051628 128051931 -71578219 - AluSq SINE Alu -10 303 1 302 280 9 19 chr5 128052156 128052263 -71577887 + CT-rich Low_complexity Low_complexity 2 107 0 229 269 13 51 chr5 128054388 128054466 -71575684 - MER5A DNA MER1_type -3 186 112 2396 114 0 0 chr5 128055370 128055676 -71574474 + AluSx SINE Alu 1 306 -6 221 331 123 15 chr5 128055888 128056018 -71574132 + MIR SINE MIR 1 144 -118 2075 100 31 17 chr5 128056763 128057052 -71573098 - AluSx SINE Alu -19 293 1 457 341 97 36 chr5 128059041 128059454 -71570696 - L2 LINE L2 -1 3271 2834 268 352 0 23 chr5 128061498 128061586 -71568564 + MIR SINE MIR 36 121 -87 1026 272 67 31 chr5 128061815 128062201 -71567949 + LTR16C LTR ERVL 91 490 -1 647 246 49 75 chr5 128064873 128065135 -71565015 + HAL1b LINE L1 487 723 -694 2236 105 0 3 chr5 128065420 128065725 -71564425 + AluSx SINE Alu 1 304 -8 1182 286 12 86 chr5 128065854 128066437 -71563713 + L2 LINE L2 2185 2724 -590 920 220 65 15 chr5 128066439 128066639 -71563511 + MER63A DNA MER1_type 1 210 0 389 332 136 27 chr5 128066648 128066945 -71563205 + L2 LINE L2 2727 3053 -219 282 287 69 30 chr5 128067128 128067229 -71562921 + L2 LINE L2 3168 3272 0 411 341 109 13 chr5 128067230 128067541 -71562609 + L1ME4a LINE L1 2234 2574 -3572 427 273 35 7 chr5 128067772 128067915 -71562235 + MER103 DNA DNA 10 156 -10 1129 280 106 33 chr5 128068190 128068915 -71561235 + L1ME4a LINE L1 5256 6015 -106 1121 244 150 42 chr5 128068941 128069705 -71560445 + L2 LINE L2 2477 3312 -1 480 268 24 16 chr5 128070501 128070624 -71559526 + L2 LINE L2 3189 3312 -1 239 286 44 11 chr5 128070644 128070735 -71559415 - MIR SINE MIR -12 250 157 319 310 43 9 chr5 128070929 128071045 -71559105 + MIR SINE MIR 18 137 -71 286 258 58 52 chr5 128071386 128071416 -71558734 + MER117 DNA MER1_type 1 29 -168 1970 235 47 45 chr5 128071416 128071970 -71558180 - MLT1H1 LTR MaLR 0 555 1 286 258 58 52 chr5 128071970 128072094 -71558056 + MER117 DNA MER1_type 29 156 -41 218 312 72 56 chr5 128073796 128073921 -71556229 + MIR SINE MIR 117 243 -19 406 276 21 48 chr5 128075454 128075599 -71554551 + MER5A DNA MER1_type 2 142 -47 556 255 140 10 chr5 128075919 128076119 -71554031 - MIR SINE MIR -12 250 25 189 283 63 69 chr5 128077102 128077261 -71552889 - MIR3 SINE MIR -16 192 35 341 313 78 0 chr5 128077403 128077518 -71552632 + L2 LINE L2 3149 3272 0 262 313 83 28 chr5 128078287 128078431 -71551719 - MIR SINE MIR -8 254 103 238 230 11 11 chr5 128079533 128079620 -71550530 + (CCA)n Simple_repeat Simple_repeat 2 88 0 893 275 213 17 chr5 128080479 128081420 -71548730 + L2 LINE L2 2154 3296 -17 222 37 0 0 chr5 128081421 128081448 -71548702 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 285 254 0 0 chr5 128081796 128081851 -71548299 - MER45 DNA AcHobo 0 1581 1527 1664 256 52 57 chr5 128081861 128082456 -71547694 - MER45C DNA AcHobo -361 592 1 1956 190 84 22 chr5 128082817 128083317 -71546833 - L1ME2 LINE L1 -2 6957 6427 * 2228 195 13 48 chr5 128083297 128083793 -71546357 + L1MD2 LINE L1 5358 5930 -404 2108 114 23 0 chr5 128083793 128084092 -71546058 + AluSc SINE Alu 1 306 -3 2228 195 13 48 chr5 128084092 128084481 -71545669 + L1MD2 LINE L1 5930 6331 -3 751 239 14 69 chr5 128084526 128084815 -71545335 - L1ME2 LINE L1 -1356 5585 5313 560 249 78 23 chr5 128084834 128085180 -71544970 - L1ME2 LINE L1 -2730 4211 3847 * 837 270 36 36 chr5 128085170 128085221 -71544929 - L1ME2 LINE L1 -4809 2227 2177 2308 96 0 3 chr5 128085221 128085534 -71544616 - AluSx SINE Alu 0 312 1 837 270 36 36 chr5 128085534 128086014 -71544136 - L1ME2 LINE L1 -4859 2177 1612 257 311 75 19 chr5 128086016 128086177 -71543973 - L1ME2 LINE L1 -6237 186 17 236 305 42 0 chr5 128086205 128086300 -71543850 - L1MC4 LINE L1 -6 8036 7938 * 3178 237 88 31 chr5 128086278 128087422 -71542728 - L1MC4 LINE L1 -166 7736 6458 699 311 70 65 chr5 128088569 128089168 -71540982 + L1MEd LINE L1 91 692 -5427 751 289 78 35 chr5 128089240 128089944 -71540206 + L1MEd LINE L1 806 1582 -4728 360 259 93 7 chr5 128090258 128090442 -71539708 + L1ME3A LINE L1 5768 5968 -196 478 300 125 50 chr5 128090676 128091557 -71538593 - L1 LINE L1 -1133 5013 4067 183 216 59 0 chr5 128093252 128093303 -71536847 - MIR3 SINE MIR -36 172 119 444 220 141 73 chr5 128094343 128094520 -71535630 - MIR SINE MIR -17 245 57 1074 250 58 77 chr5 128094939 128095407 -71534743 + LTR37B LTR ERV1 10 468 0 455 210 78 163 chr5 128096254 128096511 -71533639 + MIR SINE MIR 25 259 -3 738 238 172 33 chr5 128097002 128097305 -71532845 + L2 LINE L2 2969 3313 0 257 250 0 0 chr5 128099416 128099472 -71530678 + MIR3 SINE MIR 147 202 -6 180 111 0 0 chr5 128100598 128100625 -71529525 + (T)n Simple_repeat Simple_repeat 1 27 0 374 301 29 0 chr5 128103089 128103192 -71526958 + L2 LINE L2 3144 3249 -23 475 325 21 19 chr5 128104372 128104588 -71525562 + MIR SINE MIR 22 235 -27 495 178 11 0 chr5 128106838 128106928 -71523222 + MIR SINE MIR 102 192 -70 237 309 24 12 chr5 128107216 128107300 -71522850 - MIR SINE MIR -95 113 29 203 336 21 49 chr5 128107341 128107484 -71522666 - L2 LINE L2 -177 3095 2957 4718 114 95 21 chr5 128107651 128109030 -71521120 - pTR5 LTR ERV1 0 2606 1524 280 248 124 9 chr5 128109033 128109138 -71521012 - MIR3 SINE MIR -43 165 49 300 264 64 27 chr5 128109760 128109870 -71520280 - L2 LINE L2 -3 3310 3197 380 343 20 40 chr5 128110975 128111173 -71518977 + L2 LINE L2 2551 2744 -570 1029 259 162 39 chr5 128111175 128111647 -71518503 - L2 LINE L2 -1 3312 2784 519 250 0 0 chr5 128114633 128114741 -71515409 - LTR69 LTR ERVL 0 588 481 265 294 72 44 chr5 128114766 128114946 -71515204 + HAL1 LINE L1 1499 1683 -824 200 333 29 0 chr5 128115884 128115953 -71514197 - MIR SINE MIR -141 121 51 542 325 10 14 chr5 128116992 128117245 -71512905 - MIR SINE MIR -2 260 9 403 318 135 21 chr5 128117993 128118282 -71511868 - L2 LINE L2 -1 3271 2950 311 291 8 47 chr5 128120238 128120365 -71509785 + CT-rich Low_complexity Low_complexity 6 127 0 349 281 79 9 chr5 128120831 128120945 -71509205 - MLT1I LTR MaLR -8 401 280 323 192 14 14 chr5 128121205 128121278 -71508872 - MLT1I LTR MaLR -249 160 88 759 316 92 11 chr5 128121747 128122181 -71507969 - L1ME3A LINE L1 -210 5960 5492 5313 230 53 52 chr5 128122196 128123116 -71507034 - L1MEc LINE L1 -2215 4000 3083 1934 104 41 0 chr5 128123116 128123413 -71506737 - AluSc SINE Alu 0 308 1 5313 230 53 52 chr5 128123413 128124807 -71505343 - L1MEc LINE L1 -3132 3083 1731 1622 270 68 44 chr5 128124800 128125605 -71504545 - L1M4c LINE L1 -4415 2723 1748 * 3962 228 32 43 chr5 128125575 128126297 -71503853 - L1M4c LINE L1 -5950 909 198 1922 109 0 0 chr5 128126297 128126562 -71503588 - AluSx SINE Alu -10 302 38 3962 228 32 43 chr5 128126562 128126755 -71503395 - L1M4c LINE L1 -6661 198 4 1016 294 36 44 chr5 128126759 128127283 -71502867 - L1ME3A LINE L1 -1134 5012 4493 349 261 84 7 chr5 128127751 128127893 -71502257 - L1ME4a LINE L1 0 6121 5969 441 0 0 0 chr5 128127893 128127942 -71502208 + (TA)n Simple_repeat Simple_repeat 1 49 0 217 264 0 19 chr5 128128190 128128243 -71501907 + L3 LINE CR1 1524 1575 -2 1630 184 39 36 chr5 128128315 128128674 -71501476 - MLT1A1 LTR MaLR -3 362 3 523 147 104 39 chr5 128130120 128130287 -71499863 - MLT1A2 LTR MaLR -161 204 1 192 394 11 0 chr5 128130821 128130915 -71499235 + L3 LINE CR1 1074 1168 -409 456 121 0 0 chr5 128130945 128131036 -71499114 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 291 306 48 0 chr5 128131086 128131210 -71498940 + L3 LINE CR1 1231 1360 -217 270 344 115 0 chr5 128131254 128131446 -71498704 + L3 LINE CR1 1347 1560 -17 268 302 0 12 chr5 128133733 128133819 -71496331 + MIR3 SINE MIR 117 201 -7 199 246 101 14 chr5 128134588 128134657 -71495493 + MIR SINE MIR 21 95 -113 2140 209 67 30 chr5 128134703 128135211 -71494939 - MER77 LTR ERV1 -26 579 53 982 303 86 22 chr5 128136734 128137234 -71492916 - L2 LINE L2 -2 3311 2773 234 0 0 0 chr5 128137988 128138014 -71492136 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2771 223 76 15 chr5 128140817 128141556 -71488594 - MER20B DNA MER1_type 0 784 1 198 0 0 0 chr5 128142754 128142776 -71487374 + (A)n Simple_repeat Simple_repeat 1 22 0 182 230 60 143 chr5 128143318 128143535 -71486615 - L2 LINE L2 -2825 489 291 868 221 72 53 chr5 128143588 128143850 -71486300 - L1ME2 LINE L1 -48 6116 5850 236 250 18 0 chr5 128143907 128143963 -71486187 - L2 LINE L2 -59 3254 3198 274 280 0 0 chr5 128143969 128144044 -71486106 + L1ME LINE L1 5614 5688 -433 1850 84 38 15 chr5 128144399 128144662 -71485488 + AluSx SINE Alu 40 308 -4 722 200 100 16 chr5 128144942 128145132 -71485018 + MLT1D LTR MaLR 21 226 -279 224 283 158 25 chr5 128146934 128147054 -71483096 + L2 LINE L2 3133 3268 -4 2151 89 0 3 chr5 128147555 128147874 -71482276 - AluSc SINE Alu 0 318 1 340 306 89 7 chr5 128149092 128149233 -71480917 - MIR SINE MIR -64 144 26 530 285 53 35 chr5 128149914 128150142 -71480008 + HAL1 LINE L1 2053 2284 -223 297 240 151 27 chr5 128150168 128150314 -71479836 + HAL1 LINE L1 2344 2507 0 1858 109 12 21 chr5 128150330 128150617 -71479533 + L1PA16 LINE L1 5692 5974 -192 1247 188 0 0 chr5 128150617 128150830 -71479320 + AluJb SINE Alu 78 290 -22 400 289 0 0 chr5 128150838 128150928 -71479222 + L1MC4 LINE L1 6614 6703 -1339 334 344 0 0 chr5 128150884 128150974 -71479176 - L1MC4 LINE L1 -1339 6703 6614 * 305 217 0 17 chr5 128150929 128150989 -71479161 + L1MCa LINE L1 2006 2064 -4362 * 886 222 55 1 chr5 128150994 128151209 -71478941 + L1PA16 LINE L1 5941 6166 0 962 261 71 14 chr5 128151277 128151342 -71478808 + L1MEd LINE L1 895 955 -5355 1987 145 0 0 chr5 128151342 128151646 -71478504 + AluSx SINE Alu 1 304 -8 962 261 71 14 chr5 128151646 128152085 -71478065 + L1MEd LINE L1 955 1476 -4834 1295 285 55 26 chr5 128152195 128152687 -71477463 + MLT1J LTR MaLR 5 510 -1 369 0 0 0 chr5 128153913 128153954 -71476196 + (CA)n Simple_repeat Simple_repeat 2 42 0 608 281 52 5 chr5 128154354 128154546 -71475604 - MIR SINE MIR -1 261 61 255 274 14 0 chr5 128155268 128155341 -71474809 + MIR3 SINE MIR 114 187 -21 251 287 202 0 chr5 128155342 128155471 -71474679 + MIR SINE MIR 95 249 -13 1917 123 13 39 chr5 128155591 128155901 -71474249 + AluSx SINE Alu 1 302 -10 1399 245 72 50 chr5 128156103 128156816 -71473334 + HAL1 LINE L1 833 1560 -947 6380 65 4 2 chr5 128156827 128157630 -71472520 - L1PA8 LINE L1 0 6172 5369 2855 79 10 0 chr5 128157627 128158018 -71472132 + L1PA8 LINE L1 4954 5348 -798 * 247 200 0 0 chr5 128158017 128158067 -71472083 + HAL1 LINE L1 1546 1595 -912 * 1159 46 13 0 chr5 128158129 128158281 -71471869 + AluY SINE Alu 146 299 -12 277 304 104 20 chr5 128158298 128158499 -71471651 + HAL1 LINE L1 1700 1917 -590 429 333 0 0 chr5 128161398 128161512 -71468638 - MIR SINE MIR -102 160 47 21 0 0 0 chr5 128162004 128162025 -71468125 + AT_rich Low_complexity Low_complexity 1 21 0 180 398 35 0 chr5 128162253 128162366 -71467784 - MER5B DNA MER1_type -2 176 60 257 100 45 0 chr5 128163067 128163115 -71467035 - MIR SINE MIR -62 146 104 200 253 141 10 chr5 128164114 128164213 -71465937 - L2 LINE L2 -401 2913 2802 182 281 156 47 chr5 128167591 128167783 -71462367 - L2 LINE L2 -219 3053 2841 591 227 49 11 chr5 128168623 128168808 -71461342 - L1ME3A LINE L1 -5 6165 5974 249 245 49 49 chr5 128169954 128170056 -71460094 + MIR3 SINE MIR 106 207 -1 207 125 0 0 chr5 128170172 128170212 -71459938 + (TG)n Simple_repeat Simple_repeat 1 40 0 270 73 0 0 chr5 128170215 128170256 -71459894 + (GA)n Simple_repeat Simple_repeat 1 41 0 389 125 0 28 chr5 128172464 128172536 -71457614 - MER20B DNA MER1_type -13 770 701 2327 140 50 0 chr5 128172616 128173016 -71457134 + MSTA LTR MaLR 9 428 0 1210 269 109 36 chr5 128173017 128173433 -71456717 - MER20B DNA MER1_type -146 637 164 2870 71 32 79 chr5 128173433 128173899 -71456251 + MLT2A1 LTR ERVL 1 444 0 1210 269 109 36 chr5 128173899 128174069 -71456081 - MER20B DNA MER1_type -619 164 8 286 278 56 0 chr5 128175846 128175936 -71454214 + MER5A DNA MER1_type 3 97 -92 423 277 18 0 chr5 128176123 128176235 -71453915 + MIR SINE MIR 31 144 -64 364 269 74 0 chr5 128178542 128178650 -71451500 - L2 LINE L2 -12 3260 3145 266 231 96 83 chr5 128179891 128180047 -71450103 - MIR SINE MIR -35 227 70 679 288 37 27 chr5 128180437 128180732 -71449418 + LTR16C LTR ERVL 75 372 -119 514 194 29 109 chr5 128180897 128180953 -71449197 + L1MD2 LINE L1 6194 6253 -106 2253 114 3 0 chr5 128180953 128181242 -71448908 + AluSq SINE Alu 1 290 -23 514 194 29 109 chr5 128181242 128181360 -71448790 + L1MD2 LINE L1 6253 6354 -5 686 269 40 28 chr5 128181580 128181833 -71448317 - MER112 DNA MER1_type 0 260 5 1311 170 100 106 chr5 128181979 128182479 -71447671 - MLT1D LTR MaLR -8 497 1 333 213 46 74 chr5 128182496 128182604 -71447546 + L1MC4a LINE L1 5815 5919 -1889 211 185 19 19 chr5 128182651 128182705 -71447445 + (TA)n Simple_repeat Simple_repeat 1 54 0 1686 121 42 0 chr5 128182705 128182970 -71447180 + Tigger3(Golem) DNA MER2_type 2763 3038 0 2073 119 14 0 chr5 128182988 128183274 -71446876 - AluSx SINE Alu -22 290 1 787 165 25 25 chr5 128183943 128184101 -71446049 - MER105 DNA DNA -46 158 1 2040 126 24 3 chr5 128184504 128184797 -71445353 + AluSx SINE Alu 4 302 -10 336 342 218 35 chr5 128184866 128185381 -71444769 + HAL1b LINE L1 127 735 -613 1804 158 7 30 chr5 128185521 128185825 -71444325 + AluJb SINE Alu 1 297 -15 321 301 148 10 chr5 128185951 128186154 -71443996 + L1ME LINE L1 2254 2484 -3912 831 323 112 33 chr5 128186440 128186810 -71443340 + L1ME LINE L1 2926 3266 -2949 2266 113 0 20 chr5 128186810 128187111 -71443039 + AluSx SINE Alu 1 295 -17 831 323 112 33 chr5 128187111 128187489 -71442661 + L1ME LINE L1 3266 3824 -2391 204 40 0 0 chr5 128188063 128188088 -71442062 + (CA)n Simple_repeat Simple_repeat 2 26 0 504 297 14 36 chr5 128188122 128188398 -71441752 + L1ME LINE L1 3860 4129 -2086 427 306 10 25 chr5 128188506 128188619 -71441531 + L1ME LINE L1 5560 5670 -520 2283 112 3 13 chr5 128188619 128188922 -71441228 - AluSx SINE Alu -12 300 1 427 306 10 25 chr5 128188922 128189004 -71441146 + L1ME LINE L1 5670 5752 -438 748 274 45 0 chr5 128191468 128191669 -71438481 - MIR SINE MIR -4 258 49 343 314 57 110 chr5 128192504 128192876 -71437274 - L2 LINE L2 -4 3268 2917 4027 97 16 2 chr5 128193093 128193637 -71436513 - MER41A LTR ERV1 0 554 3 968 185 37 28 chr5 128193793 128194009 -71436141 + L1MB4 LINE L1 5940 6157 -23 251 226 157 0 chr5 128195104 128195206 -71434944 + Tigger8 DNA MER2_type 338 455 -211 2269 115 0 3 chr5 128195242 128195537 -71434613 - AluSx SINE Alu -18 294 1 265 280 30 95 chr5 128195611 128195779 -71434371 + L2 LINE L2 256 412 -2902 220 299 120 40 chr5 128195874 128195991 -71434159 + L2 LINE L2 623 729 -2585 2165 112 27 56 chr5 128195991 128196366 -71433784 - THE1B LTR MaLR 0 364 1 220 299 120 40 chr5 128196366 128196572 -71433578 + L2 LINE L2 729 972 -2342 1143 271 79 19 chr5 128196714 128197227 -71432923 - L2 LINE L2 -248 3065 2515 230 329 0 12 chr5 128197398 128197483 -71432667 + L1ME4a LINE L1 5945 6028 -93 192 329 26 26 chr5 128197579 128197655 -71432495 + L3 LINE CR1 1427 1502 -75 1658 199 10 3 chr5 128197659 128197956 -71432194 + AluJb SINE Alu 1 299 -13 931 272 126 21 chr5 128198335 128198820 -71431330 + L1ME4a LINE L1 3424 3959 -2187 1766 170 3 25 chr5 128198821 128199139 -71431011 + AluJb SINE Alu 1 311 -1 658 200 0 0 chr5 128199144 128199254 -71430896 + FLAM_A SINE Alu 1 110 -32 235 267 0 0 chr5 128199651 128199711 -71430439 + MLT1J1 LTR MaLR 126 185 -261 1661 164 36 7 chr5 128199713 128199987 -71430163 - AluJb SINE Alu -30 282 1 619 285 63 57 chr5 128200142 128200599 -71429551 + L1ME4a LINE L1 4028 4480 -1666 2350 102 0 0 chr5 128200599 128200902 -71429248 + AluSq SINE Alu 1 303 -10 619 285 63 57 chr5 128200902 128200999 -71429151 + L1ME4a LINE L1 4480 4575 -1571 1976 160 35 9 chr5 128200999 128201337 -71428813 - MER7A DNA MER2_type 0 346 2 619 285 63 57 chr5 128201337 128201501 -71428649 + L1ME4a LINE L1 4575 4808 -1338 1332 288 76 6 chr5 128201567 128202225 -71427925 + L1ME4a LINE L1 5165 5860 -310 867 204 22 17 chr5 128202241 128202422 -71427728 + FRAM SINE Alu 1 176 0 21 36 0 0 chr5 128202653 128202681 -71427469 + AT_rich Low_complexity Low_complexity 1 28 0 27 29 0 0 chr5 128204127 128204161 -71425989 + AT_rich Low_complexity Low_complexity 1 34 0 2146 126 0 7 chr5 128204171 128204464 -71425686 + AluSx SINE Alu 1 291 -21 2239 107 0 10 chr5 128204472 128204772 -71425378 + AluSx SINE Alu 1 297 -15 26113 106 8 10 chr5 128204782 128208785 -71421365 + L1P LINE L1 11 4005 -2141 409 205 24 0 chr5 128208790 128208873 -71421277 + L1 LINE L1 4168 4252 -1894 603 123 0 0 chr5 128209021 128209143 -71421007 + (TG)n Simple_repeat Simple_repeat 2 123 0 696 60 0 0 chr5 128209708 128209791 -71420359 - AluS SINE Alu -228 84 2 379 272 97 0 chr5 128210055 128210169 -71419981 - L2 LINE L2 -280 3033 2909 2693 43 0 0 chr5 128210328 128210630 -71419520 - AluY SINE Alu -9 302 1 327 252 24 16 chr5 128210786 128210909 -71419241 + L1ME4a LINE L1 5995 6118 -3 230 214 0 0 chr5 128213362 128213404 -71416746 + GA-rich Low_complexity Low_complexity 4 45 0 596 299 122 5 chr5 128213502 128213723 -71416427 - MIR SINE MIR -3 259 13 195 277 21 0 chr5 128214424 128214471 -71415679 + L2 LINE L2 3266 3313 0 549 302 132 5 chr5 128215978 128216183 -71413967 + MIR SINE MIR 5 235 -27 1933 141 3 0 chr5 128216185 128216475 -71413675 - AluSx SINE Alu -21 291 1 357 288 15 85 chr5 128216539 128216732 -71413418 - MIR SINE MIR -29 179 22 516 262 16 0 chr5 128218329 128218451 -71411699 + MIR3 SINE MIR 47 170 -38 321 224 0 15 chr5 128220168 128220235 -71409915 - MER63 DNA MER1_type -20 1040 975 256 185 0 37 chr5 128220321 128220375 -71409775 - MER63 DNA MER1_type -878 52 1 2433 66 0 0 chr5 128223276 128223577 -71406573 + AluY SINE Alu 1 301 -10 441 263 50 56 chr5 128223827 128223987 -71406163 - MIR SINE MIR -100 162 4 206 296 0 0 chr5 128224041 128224095 -71406055 + L2 LINE L2 3006 3059 -213 604 296 40 52 chr5 128224156 128224406 -71405744 + MIR SINE MIR 5 251 -11 351 164 16 0 chr5 128225834 128225895 -71404255 - L2 LINE L2 -55 3258 3197 197 222 0 44 chr5 128227273 128227318 -71402832 - L2 LINE L2 -24 3289 3247 500 318 15 76 chr5 128228401 128228665 -71401485 + MLT1K LTR MaLR 125 372 -216 323 293 9 0 chr5 128229470 128229576 -71400574 - MIR SINE MIR -61 147 41 231 222 210 0 chr5 128230330 128230411 -71399739 + MER5B DNA MER1_type 1 98 -80 221 321 67 30 chr5 128230398 128230532 -71399618 - MER5A DNA MER1_type -44 145 7 * 886 163 186 20 chr5 128231117 128231438 -71398712 - LOR1a LTR ERV1 0 497 79 215 340 52 31 chr5 128232787 128232884 -71397266 - L3b LINE CR1 -12 1571 1473 275 333 47 8 chr5 128234180 128234309 -71395841 + MIR SINE MIR 35 168 -94 204 257 18 124 chr5 128234382 128234495 -71395655 + L3 LINE CR1 926 1026 -551 538 323 61 39 chr5 128234541 128234903 -71395247 + L3 LINE CR1 1200 1569 -8 599 184 29 92 chr5 128235855 128236029 -71394121 + MIR SINE MIR 50 212 -50 257 183 17 0 chr5 128236052 128236112 -71394038 + (TTA)n Simple_repeat Simple_repeat 2 62 0 203 239 0 0 chr5 128236407 128236453 -71393697 + L2 LINE L2 3202 3247 -25 1965 128 3 13 chr5 128237747 128238051 -71392099 - AluJb SINE Alu -11 301 1 561 304 129 5 chr5 128240702 128240896 -71389254 - L1MC/D LINE L1 -2070 5738 5521 180 303 67 56 chr5 128240907 128240996 -71389154 + L3b LINE CR1 1367 1456 -127 1193 241 109 21 chr5 128241563 128242043 -71388107 - MER77 LTR ERV1 -3 602 48 6399 120 139 55 chr5 128242721 128244210 -71385940 - pTR5 LTR ERV1 0 2438 743 306 231 157 33 chr5 128246006 128246127 -71384023 - L2 LINE L2 -10 3303 3168 187 325 38 0 chr5 128246448 128246528 -71383622 - L2 LINE L2 -714 2600 2518 2201 87 0 59 chr5 128247499 128247822 -71382328 - AluSx SINE Alu -8 304 1 295 302 56 31 chr5 128248166 128248327 -71381823 - MIR SINE MIR -57 205 31 757 265 69 10 chr5 128248877 128249081 -71381069 + MER58A DNA MER1_type 9 224 0 392 286 110 63 chr5 128250844 128250912 -71379238 - L1M4c LINE L1 -4673 1711 1648 2081 100 35 0 chr5 128250912 128251201 -71378949 + AluSx SINE Alu 1 299 -13 392 286 110 63 chr5 128251201 128251558 -71378592 - L1M4c LINE L1 -4736 1648 1266 198 351 45 15 chr5 128252158 128252292 -71377858 - L2 LINE L2 -2865 449 312 191 216 98 0 chr5 128252311 128252362 -71377788 - L2 LINE L2 -930 2384 2329 313 300 68 26 chr5 128252745 128252935 -71377215 - L2 LINE L2 -2530 784 587 238 325 13 0 chr5 128252991 128253068 -71377082 - L2 LINE L2 -2893 421 344 2191 84 7 0 chr5 128253425 128253746 -71376404 + AluSp SINE Alu 1 323 0 299 226 123 38 chr5 128256828 128256934 -71373216 - MIR SINE MIR -115 147 33 270 246 201 15 chr5 128257840 128257974 -71372176 - MIR SINE MIR -73 189 31 23 33 0 0 chr5 128259899 128259929 -71370221 + AT_rich Low_complexity Low_complexity 1 30 0 743 281 168 34 chr5 128462767 128463236 -71166914 - L2 LINE L2 -1550 1764 1233 881 217 0 20 chr5 128463291 128463494 -71166656 + MER45R DNA AcHobo 1383 1581 0 439 291 140 0 chr5 128463494 128463673 -71166477 - L2 LINE L2 -2079 1235 1032 1716 208 62 88 chr5 128464131 128464632 -71165518 + MLT2B1 LTR ERVL 1 489 -31 396 0 0 0 chr5 128464632 128464676 -71165474 + (CA)n Simple_repeat Simple_repeat 2 45 0 1716 208 62 88 chr5 128464676 128464708 -71165442 + MLT2B1 LTR ERVL 489 520 0 241 250 147 9 chr5 128464986 128465102 -71165048 - MIR SINE MIR -56 206 75 251 312 56 16 chr5 128465153 128465278 -71164872 + MIR SINE MIR 96 225 -37 2587 165 26 56 chr5 128466902 128467543 -71162607 + pTR5 LTR ERV1 746 1367 -1071 258 265 0 78 chr5 128467789 128467891 -71162259 + L2 LINE L2 3169 3262 -10 219 310 78 23 chr5 128468007 128468136 -71162014 + MIR3 SINE MIR 7 142 -66 1266 199 86 119 chr5 128468736 128468818 -71161332 - MLT2B1 LTR ERVL 0 520 437 2231 112 0 0 chr5 128468818 128469121 -71161029 - AluSc SINE Alu -6 303 1 1266 199 86 119 chr5 128469121 128469576 -71160574 - MLT2B1 LTR ERVL -83 437 1 642 224 58 44 chr5 128470048 128470253 -71159897 + MER74B LTR ERVL 415 622 0 1522 226 113 7 chr5 128472677 128473092 -71157058 + MER65C LTR ERV1 1 459 -2 3334 153 41 20 chr5 128474919 128475506 -71154644 + LTR9 LTR ERV1 2 600 -12 222 365 10 10 chr5 128476189 128476285 -71153865 + L2 LINE L2 3122 3217 -55 273 146 0 0 chr5 128476477 128476525 -71153625 + (TG)n Simple_repeat Simple_repeat 2 49 0 1447 216 21 52 chr5 128476528 128476912 -71153238 - MLT2D LTR ERVL -37 377 6 1602 193 37 29 chr5 128477087 128477470 -71152680 + MER58D DNA MER1_type 1 386 0 234 91 0 0 chr5 128478549 128478582 -71151568 + (T)n Simple_repeat Simple_repeat 1 33 0 208 326 69 7 chr5 128479333 128479477 -71150673 + L2 LINE L2 2328 2480 -834 217 289 18 72 chr5 128480298 128480464 -71149686 + C-rich Low_complexity Low_complexity 3 159 0 323 255 20 20 chr5 128480777 128480875 -71149275 - MIR SINE MIR -62 146 49 4810 99 5 8 chr5 128481018 128481687 -71148463 - PABL_B LTR ERV1 0 667 1 312 248 64 37 chr5 128482040 128482149 -71148001 + MLT1J2 LTR MaLR 64 175 -275 560 237 62 50 chr5 128482182 128482379 -71147771 + MLT1J2 LTR MaLR 266 447 -3 259 269 21 11 chr5 128482449 128482542 -71147608 + T-rich Low_complexity Low_complexity 5 98 0 314 271 146 28 chr5 128483963 128484107 -71146043 - MIR SINE MIR -65 197 37 225 154 0 0 chr5 128484459 128484498 -71145652 + GA-rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr5 128484944 128484973 -71145177 + AT_rich Low_complexity Low_complexity 1 29 0 1975 159 58 0 chr5 128487617 128487944 -71142206 - MER7A DNA MER2_type 0 346 3 204 213 0 21 chr5 128488663 128488710 -71141440 + G-rich Low_complexity Low_complexity 1 46 0 332 43 22 0 chr5 128489716 128489762 -71140388 + (TG)n Simple_repeat Simple_repeat 1 47 0 2434 39 7 0 chr5 128489796 128490117 -71140033 - AluY SINE Alu 0 323 1 255 276 35 0 chr5 128490129 128490216 -71139934 - MIR SINE MIR -106 156 67 182 258 32 0 chr5 128490273 128490335 -71139815 - MIR SINE MIR -77 131 68 229 265 60 17 chr5 128490395 128490512 -71139638 - L1ME LINE L1 -333 5788 5667 972 137 14 0 chr5 128490560 128490706 -71139444 - AluSg/x SINE Alu -26 286 139 201 196 0 0 chr5 128491388 128491434 -71138716 + (TA)n Simple_repeat Simple_repeat 2 47 0 230 204 0 0 chr5 128491439 128491493 -71138657 - L1MC3 LINE L1 -1133 6652 6599 41 103 0 0 chr5 128491493 128491639 -71138511 + AT_rich Low_complexity Low_complexity 1 146 0 2397 116 27 19 chr5 128491644 128492016 -71138134 + THE1C LTR MaLR 1 375 0 4021 184 72 23 chr5 128492116 128492939 -71137211 - MER21B LTR ERV1 0 863 1 2918 189 24 42 chr5 128492947 128493570 -71136580 + LTR9 LTR ERV1 1 612 0 360 0 0 0 chr5 128493626 128493666 -71136484 + (CA)n Simple_repeat Simple_repeat 2 41 0 437 220 31 6 chr5 128494703 128494862 -71135288 + CT-rich Low_complexity Low_complexity 3 165 0 3666 153 5 29 chr5 128495561 128496188 -71133962 - LTR9 LTR ERV1 0 612 1 257 200 0 20 chr5 128496298 128496348 -71133802 + MER34 LTR ERV1 67 115 -427 * 1128 232 56 51 chr5 128496322 128496753 -71133397 + MER39 LTR ERV1 250 682 -25 2378 216 52 25 chr5 128496773 128497374 -71132776 - L1ME1 LINE L1 -93 6073 5457 296 229 52 55 chr5 128497890 128498041 -71132109 - MER21B LTR ERV1 -111 752 561 1791 220 34 96 chr5 128498080 128498693 -71131457 - MER21B LTR ERV1 -288 575 1 1441 183 54 107 chr5 128498713 128499217 -71130933 - MER31A LTR ERV1 -6 479 3 2296 102 0 0 chr5 128499970 128500265 -71129885 - AluSg SINE Alu -15 295 1 2006 143 10 0 chr5 128502282 128502712 -71127438 - AluSx SINE Alu 0 433 1 225 244 0 51 chr5 128503092 128503170 -71126980 + MER34 LTR ERV1 67 140 -402 2030 134 7 0 chr5 128503181 128503479 -71126671 + AluSx SINE Alu 1 300 -12 988 263 48 46 chr5 128503488 128503880 -71126270 + MER39 LTR ERV1 305 697 -10 2163 118 3 3 chr5 128504338 128504635 -71125515 - AluSc SINE Alu -12 297 1 303 28 0 0 chr5 128504851 128504887 -71125263 + (CA)n Simple_repeat Simple_repeat 2 37 0 27 49 0 0 chr5 128506434 128506475 -71123675 + AT_rich Low_complexity Low_complexity 1 41 0 436 324 104 55 chr5 128506925 128507334 -71122816 + L3 LINE CR1 229 683 -894 1773 47 0 0 chr5 128507334 128507545 -71122605 + L1PA5 LINE L1 5944 6154 0 436 324 104 55 chr5 128507545 128507790 -71122360 + L3 LINE CR1 683 915 -662 453 245 141 31 chr5 128507918 128508081 -71122069 + MLT1G1 LTR MaLR 1 181 -414 259 257 54 27 chr5 128508114 128508188 -71121962 + MLT1G1 LTR MaLR 202 277 -313 1713 109 13 0 chr5 128508189 128508428 -71121722 + AluSg SINE Alu 59 300 -10 247 300 11 0 chr5 128508612 128508702 -71121448 + MLT1G1 LTR MaLR 465 555 0 992 236 63 73 chr5 128508844 128509242 -71120908 - MSTD LTR MaLR -2 394 1 191 329 0 41 chr5 128509818 128509891 -71120259 + MER5B DNA MER1_type 31 100 -78 2382 160 15 5 chr5 128511933 128512332 -71117818 + MER57A LTR ERV1 1 403 0 186 43 0 0 chr5 128514346 128514369 -71115781 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 4551 127 46 82 chr5 128514991 128515988 -71114162 + pTR5 LTR ERV1 743 2020 -418 323 235 31 20 chr5 128515992 128516090 -71114060 + LTR30 LTR ERV1 544 642 -80 1527 112 49 0 chr5 128516091 128516315 -71113835 + LTR12 LTR ERV1 480 714 0 4484 139 69 98 chr5 128516415 128517845 -71112305 + pTR5 LTR ERV1 733 2438 0 27 49 0 0 chr5 128518093 128518134 -71112016 + AT_rich Low_complexity Low_complexity 1 41 0 510 218 0 63 chr5 128519220 128519362 -71110788 + Charlie4 DNA MER1_type 1818 1950 -11 234 267 0 35 chr5 128519846 128519932 -71110218 + GA-rich Low_complexity Low_complexity 2 84 0 563 228 89 32 chr5 128520161 128520319 -71109831 + FRAM SINE Alu 1 159 -17 488 216 0 10 chr5 128521505 128521602 -71108548 - MER20 DNA MER1_type 0 219 124 331 287 111 9 chr5 128523261 128523369 -71106781 - L1ME4a LINE L1 -18 6103 5985 22 0 0 0 chr5 128523419 128523441 -71106709 + AT_rich Low_complexity Low_complexity 1 22 0 420 316 23 6 chr5 128523488 128523665 -71106485 - L1ME4a LINE L1 -305 5816 5637 334 318 39 11 chr5 128524059 128524238 -71105912 - MLT1C LTR MaLR 0 467 284 263 340 41 15 chr5 128524244 128524512 -71105638 - L1ME LINE L1 -5214 856 582 1850 246 75 6 chr5 128524517 128525026 -71105124 - MER74A LTR ERVL -2 556 13 312 201 22 30 chr5 128525432 128525566 -71104584 + GA-rich Low_complexity Low_complexity 4 136 0 205 325 13 13 chr5 128525576 128525653 -71104497 + G-rich Low_complexity Low_complexity 3 79 0 1168 236 102 3 chr5 128525830 128526182 -71103968 + MLT1B LTR MaLR 4 390 0 260 304 58 14 chr5 128526202 128526340 -71103810 - L1ME LINE L1 -5911 159 16 180 0 0 0 chr5 128526559 128526579 -71103571 + (T)n Simple_repeat Simple_repeat 1 20 0 234 0 0 0 chr5 128526929 128526955 -71103195 + (TG)n Simple_repeat Simple_repeat 2 27 0 606 260 104 10 chr5 128527170 128527362 -71102788 + MER63A DNA MER1_type 1 210 0 846 234 48 0 chr5 128527427 128527636 -71102514 - MER20 DNA MER1_type 0 219 1 229 240 83 74 chr5 128528496 128528617 -71101533 + MER5C DNA MER1_type 1 122 -202 232 225 0 38 chr5 128528647 128528727 -71101423 + MER5C DNA MER1_type 214 290 -34 1019 151 21 43 chr5 128529960 128530146 -71100004 - LTR32 LTR ERVL -5 466 285 322 88 0 88 chr5 128530160 128530217 -71099933 - LTR32 LTR ERVL -407 64 13 487 302 78 0 chr5 128530221 128530400 -71099750 - HERVL32 LTR ERVL -4 3414 3222 427 175 300 56 chr5 128530524 128530684 -71099466 - HERVL32 LTR ERVL -869 2549 2351 688 315 48 34 chr5 128530793 128531145 -71099005 - HERVL32 LTR ERVL -2107 1311 955 436 226 0 0 chr5 128531156 128531240 -71098910 - HERVL32 LTR ERVL -2380 1038 955 403 238 0 0 chr5 128531251 128531335 -71098815 - HERVL32 LTR ERVL -2380 1038 955 1139 248 43 48 chr5 128531346 128531721 -71098429 - HERVL32 LTR ERVL -2380 1038 666 2251 253 20 40 chr5 128531785 128532468 -71097682 - HERVL32 LTR ERVL -2697 721 52 365 303 0 0 chr5 128532738 128532837 -71097313 - HERVL32 LTR ERVL -3308 110 12 908 223 22 11 chr5 128532846 128533030 -71097120 - LTR32 LTR ERVL -1 470 285 258 219 47 0 chr5 128533030 128533094 -71097056 - LTR32 LTR ERVL -391 80 14 547 273 123 53 chr5 128534405 128534705 -71095445 + MLT1H LTR MaLR 63 383 -166 365 294 114 21 chr5 128535133 128535331 -71094819 + MIR SINE MIR 35 251 -11 1274 227 133 12 chr5 128535496 128535896 -71094254 + L1ME3A LINE L1 5438 5886 -284 856 225 65 65 chr5 128536024 128536111 -71094039 + L1ME3A LINE L1 5859 5945 -225 1998 118 7 7 chr5 128536111 128536408 -71093742 + AluSc SINE Alu 1 297 -12 856 225 65 65 chr5 128536408 128536627 -71093523 + L1ME3A LINE L1 5944 6165 -5 461 132 15 0 chr5 128536780 128536848 -71093302 + Tigger5 DNA MER2_type 2255 2323 0 438 198 12 0 chr5 128536901 128536987 -71093163 + Tigger5 DNA MER2_type 2237 2323 0 184 341 122 8 chr5 128537706 128537829 -71092321 - MIR SINE MIR -6 256 120 1510 245 32 4 chr5 128537831 128538240 -71091910 - MER70A LTR ERVL 0 472 1 487 233 224 9 chr5 128538753 128538963 -71091187 + L2 LINE L2 3059 3313 0 302 0 26 0 chr5 128539429 128539467 -71090683 + (CA)n Simple_repeat Simple_repeat 2 40 0 936 219 11 88 chr5 128539492 128539752 -71090398 + MIR SINE MIR 18 257 -5 21 57 0 0 chr5 128539780 128539815 -71090335 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 128539924 128539945 -71090205 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr5 128540049 128540088 -71090062 + AT_rich Low_complexity Low_complexity 1 39 0 327 203 122 16 chr5 128541275 128541398 -71088752 + MER20B DNA MER1_type 647 782 -1 207 296 71 20 chr5 128542539 128542637 -71087513 - L2 LINE L2 -20 3252 3150 4477 158 46 2 chr5 128542785 128543570 -71086580 - Tigger3(Golem) DNA MER2_type -1 3028 2210 275 329 157 7 chr5 128543790 128543930 -71086220 - L2 LINE L2 -5 3267 3107 1544 185 0 19 chr5 128544220 128544528 -71085622 + AluJo SINE Alu 2 303 -9 1357 217 86 9 chr5 128545355 128545692 -71084458 + MLT1A1 LTR MaLR 2 364 -1 369 321 76 0 chr5 128545781 128545912 -71084238 + MIR3 SINE MIR 13 153 -55 3932 127 23 5 chr5 128545940 128546541 -71083609 - LTR9 LTR ERV1 0 612 1 496 284 105 75 chr5 128546608 128547009 -71083141 + L2 LINE L2 2901 3313 0 350 330 0 10 chr5 128548090 128548193 -71081957 - MIR SINE MIR -80 128 27 278 301 59 48 chr5 128548622 128548808 -71081342 + L2 LINE L2 2034 2221 -1093 208 335 93 41 chr5 128548992 128549359 -71080791 + L2 LINE L2 2286 2671 -643 2075 136 0 0 chr5 128549394 128549703 -71080447 - AluSc SINE Alu 0 309 1 2010 120 10 7 chr5 128549743 128550052 -71080098 + AluSx SINE Alu 3 312 0 260 398 17 0 chr5 128550477 128550595 -71079555 + L2 LINE L2 3184 3303 -10 22 0 0 0 chr5 128550874 128550896 -71079254 + AT_rich Low_complexity Low_complexity 1 22 0 650 218 7 28 chr5 128550900 128551042 -71079108 - MER58A DNA MER1_type -41 183 45 281 279 114 63 chr5 128552254 128552508 -71077642 - MLT1I LTR MaLR -45 364 98 439 272 106 33 chr5 128552832 128553012 -71077138 - MIR SINE MIR -38 224 32 261 288 50 36 chr5 128553097 128553236 -71076914 + L1ME LINE L1 5605 5745 -376 316 269 74 28 chr5 128553467 128553575 -71076575 + L1MCa LINE L1 1955 2067 -4359 1473 181 7 42 chr5 128553954 128554263 -71075887 - AluJo SINE Alu -14 298 1 269 266 16 0 chr5 128555581 128555645 -71074505 - MIR SINE MIR -62 146 82 28 29 0 0 chr5 128557099 128557134 -71073016 + AT_rich Low_complexity Low_complexity 1 35 0 237 196 0 39 chr5 128557306 128557357 -71072793 - L1PA12 LINE L1 -6866 715 667 2170 109 0 0 chr5 128557473 128557784 -71072366 + AluSx SINE Alu 1 311 -1 1830 107 75 0 chr5 128558973 128559254 -71070896 - AluSg SINE Alu -8 302 1 411 198 35 0 chr5 128559256 128559342 -71070808 + MIR3 SINE MIR 117 205 -3 764 109 0 0 chr5 128560947 128561057 -71069093 - AluSx SINE Alu -1 309 200 955 126 0 0 chr5 128561057 128561192 -71068958 - AluSx SINE Alu -177 135 1 1079 258 94 14 chr5 128561481 128561916 -71068234 - Charlie4a DNA MER1_type -38 470 1 249 163 0 0 chr5 128563607 128563656 -71066494 + (CAAAG)n Simple_repeat Simple_repeat 1 49 0 323 252 166 14 chr5 128563973 128564112 -71066038 + MER5A DNA MER1_type 2 161 -28 380 355 0 36 chr5 128564244 128564410 -71065740 + MER5B DNA MER1_type 3 162 -16 2487 121 3 13 chr5 128565032 128565411 -71064739 + THE1C LTR MaLR 1 375 0 283 268 14 42 chr5 128565640 128565782 -71064368 + GA-rich Low_complexity Low_complexity 4 141 0 180 129 32 0 chr5 128566383 128566414 -71063736 + L3 LINE CR1 1432 1463 -114 2367 105 0 0 chr5 128566942 128567246 -71062904 + AluSc SINE Alu 1 304 -5 520 263 36 0 chr5 128567801 128568019 -71062131 - L1MCa LINE L1 -4684 1712 1300 2063 116 9 44 chr5 128568037 128568355 -71061795 + AluSg SINE Alu 4 310 0 21 0 0 0 chr5 128568355 128568376 -71061774 + AT_rich Low_complexity Low_complexity 1 21 0 348 258 71 65 chr5 128568401 128568556 -71061594 - L1MCa LINE L1 -4899 1318 1163 374 213 24 16 chr5 128568654 128568781 -71061369 - L1MCa LINE L1 -5269 1127 1000 401 228 79 0 chr5 128569583 128569684 -71060466 - MER45A DNA AcHobo -4 174 66 649 248 10 5 chr5 128569740 128569938 -71060212 + L1MA4 LINE L1 6097 6295 -5 372 335 25 41 chr5 128569974 128570171 -71059979 + L1ME LINE L1 275 468 -5602 243 0 0 0 chr5 128570215 128570242 -71059908 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 362 252 72 36 chr5 128570919 128571058 -71059092 - MER5A DNA MER1_type -11 178 35 * 580 255 21 14 chr5 128570936 128571081 -71059069 + MER5A DNA MER1_type 44 189 0 321 260 55 79 chr5 128572029 128572156 -71057994 - MIR SINE MIR -40 222 99 2043 136 7 7 chr5 128573984 128574292 -71055858 - AluSx SINE Alu -4 308 1 218 255 0 58 chr5 128574508 128574696 -71055454 + (TAGGG)n Simple_repeat Simple_repeat 3 179 0 1977 75 4 0 chr5 128576669 128576922 -71053228 - AluY SINE Alu -20 291 38 219 256 295 0 chr5 128577489 128577567 -71052583 - MIR SINE MIR -62 146 46 260 278 44 0 chr5 128578800 128578890 -71051260 - LTR33A LTR ERVL -343 180 87 22 35 0 0 chr5 128580499 128580528 -71049622 + AT_rich Low_complexity Low_complexity 1 29 0 215 346 47 19 chr5 128581046 128581153 -71048997 - L2 LINE L2 -17 3255 3146 337 310 257 6 chr5 128584893 128585064 -71045086 - MIR SINE MIR -10 252 39 2215 108 7 0 chr5 128585303 128585610 -71044540 + AluSx SINE Alu 1 309 -3 648 285 36 0 chr5 128585701 128585922 -71044228 - MER119 DNA MER1_type -315 268 40 614 249 146 54 chr5 128585982 128586372 -71043778 - L1M4 LINE L1 -1110 5036 4611 4666 173 50 19 chr5 128588906 128590300 -71039850 - L1PA15 LINE L1 -17 6799 5347 4333 217 27 10 chr5 128590998 128592090 -71038060 - L1PA15 LINE L1 -1409 5388 4279 3501 216 113 11 chr5 128592087 128593190 -71036960 - L1PA15 LINE L1 -4285 2512 1287 * 3021 269 26 24 chr5 128593253 128594130 -71036020 - L1PA15 LINE L1 -5908 879 1 220 211 19 0 chr5 128594930 128594982 -71035168 + GA-rich Low_complexity Low_complexity 1 53 0 1017 161 31 36 chr5 128595071 128595294 -71034856 + MER21A LTR ERV1 43 264 -667 2503 191 34 43 chr5 128595299 128595859 -71034291 + MER21A LTR ERV1 376 930 -1 201 74 0 0 chr5 128595945 128595972 -71034178 + (TC)n Simple_repeat Simple_repeat 2 28 0 26 0 0 0 chr5 128596702 128596728 -71033422 + AT_rich Low_complexity Low_complexity 1 26 0 216 0 0 0 chr5 128596771 128596795 -71033355 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1856 228 69 34 chr5 128596814 128597407 -71032743 - L1MC3 LINE L1 -36 7749 7136 291 52 52 17 chr5 128598247 128598305 -71031845 + A-rich Low_complexity Low_complexity 4 63 0 365 275 42 33 chr5 128598480 128598600 -71031550 + HAL1b LINE L1 61 181 -1167 264 349 30 26 chr5 128598654 128598923 -71031227 + HAL1b LINE L1 272 541 -807 1985 148 3 10 chr5 128598925 128599229 -71030921 - AluSx SINE Alu -10 302 1 437 143 0 0 chr5 128599568 128599638 -71030512 + Alu SINE Alu 236 305 -7 898 320 115 41 chr5 128599848 128600674 -71029476 + L1M4 LINE L1 2115 3001 -3145 12236 226 26 15 chr5 128600682 128604231 -71025919 + L1PB3 LINE L1 547 4056 -2814 1913 149 43 25 chr5 128604231 128604599 -71025551 + THE1C LTR MaLR 1 375 0 12236 226 26 15 chr5 128604599 128605597 -71024553 + L1PB3 LINE L1 4056 5042 -1828 1856 169 75 6 chr5 128605597 128605945 -71024205 - THE1C LTR MaLR 0 375 4 10049 110 35 37 chr5 128605948 128607531 -71022619 - THE1C-int LTR MaLR 0 1580 1 2508 124 14 3 chr5 128607531 128607902 -71022248 - THE1C LTR MaLR 0 375 1 12236 226 26 15 chr5 128607902 128610500 -71019650 + L1PB3 LINE L1 5042 6863 -7 333 268 65 72 chr5 128610532 128610685 -71019465 + L1MC4 LINE L1 6492 6643 -1399 236 194 92 51 chr5 128610692 128610790 -71019360 - MER34 LTR ERV1 -6 536 435 2248 256 65 39 chr5 128611248 128612225 -71017925 + L1MC4 LINE L1 6668 7670 -372 22 70 0 0 chr5 128612357 128612400 -71017750 + AT_rich Low_complexity Low_complexity 1 43 0 317 189 27 0 chr5 128612473 128612547 -71017603 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 325 233 8 53 chr5 128612581 128612714 -71017436 + L1MC4 LINE L1 7916 8042 0 189 0 0 0 chr5 128613314 128613335 -71016815 + (TC)n Simple_repeat Simple_repeat 1 21 0 446 0 19 0 chr5 128613335 128613389 -71016761 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 224 294 172 37 chr5 128614201 128614311 -71015839 + MIR SINE MIR 78 172 -90 711 225 162 60 chr5 128614311 128614676 -71015474 + MER57A LTR ERV1 2 403 0 185 268 0 0 chr5 128614676 128614717 -71015433 + L2 LINE L2 3215 3255 -17 224 294 172 37 chr5 128614717 128614728 -71015422 + MIR SINE MIR 171 262 0 180 161 0 0 chr5 128615856 128615887 -71014263 - L2 LINE L2 -96 3217 3187 266 345 69 17 chr5 128616546 128616836 -71013314 + L2 LINE L2 2988 3292 -21 2451 130 55 2 chr5 128616885 128617307 -71012843 + LTR56 LTR ERV1 2 445 0 414 163 44 133 chr5 128619969 128620104 -71010046 - MER94 DNA DNA 0 134 12 198 182 26 13 chr5 128620905 128620982 -71009168 + (TA)n Simple_repeat Simple_repeat 1 78 0 2859 252 66 28 chr5 128621589 128622534 -71007616 + L1M4 LINE L1 679 1769 -4877 417 39 0 0 chr5 128622534 128622585 -71007565 + (CA)n Simple_repeat Simple_repeat 1 51 0 2859 252 66 28 chr5 128622585 128622889 -71007261 + L1M4 LINE L1 1769 2060 -4586 * 5126 260 51 16 chr5 128622888 128624667 -71005483 + L1M4 LINE L1 3752 5592 -1052 1472 214 73 24 chr5 128624697 128625080 -71005070 + L1M4 LINE L1 5800 6201 -475 1965 204 53 9 chr5 128625143 128625332 -71004818 + L1MB7 LINE L1 5665 5844 -340 1513 165 78 35 chr5 128625332 128625678 -71004472 + MER46B DNA MER2_type 1 236 0 1965 204 53 9 chr5 128625678 128625925 -71004225 + L1MB7 LINE L1 5844 6120 -64 612 197 0 0 chr5 128626596 128626903 -71003247 + (TG)n Simple_repeat Simple_repeat 1 307 0 363 194 0 0 chr5 128626937 128627045 -71003105 + (TG)n Simple_repeat Simple_repeat 2 109 0 26 30 0 0 chr5 128630345 128630378 -70999772 + AT_rich Low_complexity Low_complexity 1 33 0 697 197 0 44 chr5 128631082 128631219 -70998931 - FLAM_C SINE Alu -11 132 2 21 0 0 0 chr5 128633230 128633251 -70996899 + AT_rich Low_complexity Low_complexity 1 21 0 234 204 0 19 chr5 128633434 128633488 -70996662 - LTR33A LTR ERVL -25 498 446 3417 181 10 30 chr5 128639273 128639952 -70990198 + L1MB2 LINE L1 5454 6119 -52 1866 160 0 0 chr5 128641951 128642238 -70987912 + AluSx SINE Alu 3 289 -23 183 42 0 0 chr5 128642241 128642265 -70987885 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 216 0 0 0 chr5 128643372 128643396 -70986754 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7390 38 1 0 chr5 128643396 128644428 -70985722 - L1PA4 LINE L1 -30 6125 5093 1143 179 83 133 chr5 128644809 128645216 -70984934 - MER47B DNA MER2_type 0 418 32 231 273 45 23 chr5 128645437 128645525 -70984625 + MIR SINE MIR 14 103 -159 614 241 85 7 chr5 128645567 128645708 -70984442 + MER8 DNA MER2_type 81 232 -7 22 56 0 0 chr5 128645967 128646003 -70984147 + AT_rich Low_complexity Low_complexity 1 36 0 5511 102 3 3 chr5 128646189 128646955 -70983195 - L1PA8 LINE L1 -3 6169 5404 3457 69 2 2 chr5 128646955 128647403 -70982747 + LTR7 LTR ERV1 1 448 -2 19512 93 10 63 chr5 128647405 128650559 -70979591 + HERVH LTR ERV1 1 2987 -4726 2038 112 6 15 chr5 128650711 128651041 -70979109 + HERVH LTR ERV1 3667 3993 -3720 2807 157 7 3 chr5 128651043 128651650 -70978500 + HERVH LTR ERV1 4488 5149 -2564 1000 107 0 7 chr5 128651651 128651801 -70978349 + HERVH LTR ERV1 5600 5748 -1965 2167 77 54 0 chr5 128651802 128652115 -70978035 + HERVH LTR ERV1 7384 7713 0 3266 71 9 13 chr5 128652115 128652565 -70977585 + LTR7 LTR ERV1 1 448 -2 3190 99 12 10 chr5 128652574 128653058 -70977092 - L1P LINE L1 -746 5400 4916 217 217 22 0 chr5 128653058 128653104 -70977046 + MIR3 SINE MIR 110 156 -52 415 282 157 0 chr5 128653381 128653638 -70976512 + L2 LINE L2 2714 3001 -312 203 162 0 0 chr5 128653660 128653697 -70976453 + (CA)n Simple_repeat Simple_repeat 1 37 0 646 183 0 24 chr5 128653929 128654055 -70976095 - FRAM SINE Alu -8 168 46 204 115 81 172 chr5 128654095 128654182 -70975968 + L2 LINE L2 3235 3313 0 312 264 11 11 chr5 128655670 128655761 -70974389 + MER81 DNA DNA 23 113 -1 1878 221 10 10 chr5 128655826 128656238 -70973912 + L1MA9 LINE L1 3923 4334 -1812 219 273 0 0 chr5 128657407 128657462 -70972688 + T-rich Low_complexity Low_complexity 1 55 0 293 131 16 0 chr5 128658286 128658347 -70971803 + CT-rich Low_complexity Low_complexity 1 62 0 222 191 0 0 chr5 128658387 128658434 -70971716 + CT-rich Low_complexity Low_complexity 1 47 0 4212 205 51 36 chr5 128659178 128659789 -70970361 + L1MA9 LINE L1 4295 4895 -1417 1978 128 0 20 chr5 128659789 128660085 -70970065 + AluSg SINE Alu 1 290 -20 4212 205 51 36 chr5 128660085 128660454 -70969696 + L1MA9 LINE L1 4895 5257 -1055 7816 22 6 0 chr5 128660454 128661580 -70968570 + L1PA3 LINE L1 5023 6154 -1 4212 205 51 36 chr5 128661580 128662543 -70967607 + L1MA9 LINE L1 5257 6274 -38 299 238 98 119 chr5 128663053 128663104 -70967046 - MLT1L LTR MaLR -27 588 537 2659 30 3 0 chr5 128663104 128663404 -70966746 - AluY SINE Alu -10 301 1 299 238 98 119 chr5 128663404 128663739 -70966411 - MLT1L LTR MaLR -78 537 110 1450 120 0 5 chr5 128667075 128667283 -70962867 - AluSg/x SINE Alu -14 298 92 485 301 5 17 chr5 128667544 128667973 -70962177 + (CGTG)n Simple_repeat Simple_repeat 1 423 0 463 326 0 0 chr5 128668013 128668234 -70961916 + (CGTG)n Simple_repeat Simple_repeat 1 221 0 456 308 0 22 chr5 128668274 128668456 -70961694 + (CGTG)n Simple_repeat Simple_repeat 2 179 0 300 272 105 72 chr5 128668741 128669200 -70960950 + MLT1J LTR MaLR 32 505 -6 228 144 11 56 chr5 128669408 128669498 -70960652 + (TA)n Simple_repeat Simple_repeat 2 87 0 2063 129 31 0 chr5 128669561 128669847 -70960303 - AluSx SINE Alu -17 295 1 21 57 0 0 chr5 128670174 128670209 -70959941 + AT_rich Low_complexity Low_complexity 1 35 0 368 291 153 39 chr5 128670580 128670862 -70959288 - L2 LINE L2 -5 3308 2995 756 264 123 32 chr5 128670903 128671356 -70958794 + MLT1G1 LTR MaLR 82 501 -4 731 306 213 14 chr5 128671380 128671523 -70958627 - L2 LINE L2 -366 2948 2835 670 242 44 66 chr5 128671523 128671750 -70958400 + MER58A DNA MER1_type 1 222 -2 731 306 213 14 chr5 128671750 128672038 -70958112 - L2 LINE L2 -479 2835 2431 5382 123 2 17 chr5 128672506 128673349 -70956801 + L1PA13 LINE L1 5333 6163 0 262 193 79 35 chr5 128676185 128676200 -70953950 - L1MA10 LINE L1 0 6334 6320 1475 243 69 17 chr5 128676200 128676661 -70953489 - L1ME1 LINE L1 -4 6162 5678 1037 206 49 9 chr5 128676661 128676884 -70953266 + MLT1B LTR MaLR 159 390 0 438 272 153 35 chr5 128677426 128677713 -70952437 + Charlie2 DNA MER1_type 10 330 -2452 2794 22 0 0 chr5 128677751 128678062 -70952088 + AluY SINE Alu 1 311 0 2417 213 94 10 chr5 128678062 128678744 -70951406 + Charlie2 DNA MER1_type 1869 2607 -255 656 249 62 31 chr5 128679152 128679377 -70950773 + MIR SINE MIR 2 233 -29 21 0 0 0 chr5 128680638 128680659 -70949491 + AT_rich Low_complexity Low_complexity 1 21 0 1171 158 0 11 chr5 128680672 128680855 -70949295 - AluJo SINE Alu -131 181 1 40 73 0 0 chr5 128681387 128681469 -70948681 + AT_rich Low_complexity Low_complexity 1 82 0 2279 97 0 7 chr5 128681801 128682100 -70948050 - AluSc SINE Alu -12 297 1 245 244 26 70 chr5 128682110 128682225 -70947925 - HAL1 LINE L1 -1132 1375 1266 1521 171 79 34 chr5 128683143 128683499 -70946651 + MLT1A2 LTR MaLR 1 372 -2 215 332 102 71 chr5 128684881 128685077 -70945073 - MIR3 SINE MIR -3 205 4 786 120 11 33 chr5 128685678 128685862 -70944288 + (TG)n Simple_repeat Simple_repeat 1 180 0 196 75 25 25 chr5 128685877 128685917 -70944233 + (TG)n Simple_repeat Simple_repeat 1 40 0 465 285 138 28 chr5 128686043 128686261 -70943889 - MIR SINE MIR 0 262 22 297 0 0 0 chr5 128686378 128686411 -70943739 + (TG)n Simple_repeat Simple_repeat 1 33 0 551 330 140 6 chr5 128686824 128687139 -70943011 - L2 LINE L2 -2 3311 2955 21 0 0 0 chr5 128687204 128687225 -70942925 + AT_rich Low_complexity Low_complexity 1 21 0 535 302 97 50 chr5 128687458 128687879 -70942271 - MLT1K LTR MaLR -23 565 125 2130 118 3 0 chr5 128688558 128688862 -70941288 + AluSx SINE Alu 1 305 -7 519 170 35 0 chr5 128690345 128690486 -70939664 + CT-rich Low_complexity Low_complexity 4 149 0 891 121 11 22 chr5 128690489 128690671 -70939479 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 852 129 22 11 chr5 128690709 128690887 -70939263 + CT-rich Low_complexity Low_complexity 1 180 0 912 127 6 22 chr5 128690906 128691087 -70939063 + (TTCC)n Simple_repeat Simple_repeat 2 179 0 295 214 36 24 chr5 128691089 128691173 -70938977 + CT-rich Low_complexity Low_complexity 4 88 0 326 52 21 83 chr5 128691173 128691269 -70938881 + (TCTA)n Simple_repeat Simple_repeat 3 92 0 24 77 0 0 chr5 128692740 128692792 -70937358 + AT_rich Low_complexity Low_complexity 1 52 0 265 301 0 16 chr5 128692862 128692985 -70937165 + (TA)n Simple_repeat Simple_repeat 1 121 0 276 203 14 14 chr5 128692999 128693068 -70937082 - MIR SINE MIR -103 159 91 199 250 83 0 chr5 128693128 128693188 -70936962 - MIR SINE MIR -115 93 29 678 280 42 42 chr5 128693220 128693456 -70936694 - MIR SINE MIR 0 262 27 261 396 13 22 chr5 128693521 128693751 -70936399 - MIR SINE MIR -1 261 34 22 0 0 0 chr5 128694031 128694053 -70936097 + AT_rich Low_complexity Low_complexity 1 22 0 408 20 0 0 chr5 128694968 128695017 -70935133 + (TC)n Simple_repeat Simple_repeat 2 50 0 2144 113 3 0 chr5 128695017 128695301 -70934849 - AluSx SINE Alu -27 285 1 687 250 89 51 chr5 128696364 128696600 -70933550 - MLT1G1 LTR MaLR -27 568 324 602 274 181 49 chr5 128697048 128697373 -70932777 - MLT1G1 LTR MaLR -208 387 1 21 0 0 0 chr5 128697383 128697404 -70932746 + AT_rich Low_complexity Low_complexity 1 21 0 406 297 108 16 chr5 128697748 128697933 -70932217 - MIR SINE MIR -46 216 15 2479 160 36 14 chr5 128698203 128698622 -70931528 - MSTA LTR MaLR 0 428 1 9431 175 43 2 chr5 128698623 128700208 -70929942 - MSTA-int LTR MaLR 0 1651 1 2455 157 31 14 chr5 128700208 128700629 -70929521 - MSTA LTR MaLR 0 428 1 294 346 57 31 chr5 128701676 128701904 -70928246 + MIR SINE MIR 18 251 -11 51 65 0 0 chr5 128701926 128702019 -70928131 + AT_rich Low_complexity Low_complexity 1 93 0 442 304 131 52 chr5 128702129 128702695 -70927455 - L2 LINE L2 0 3313 2726 269 200 10 110 chr5 128702851 128702951 -70927199 - L2 LINE L2 -803 2511 2422 367 298 53 0 chr5 128703030 128703144 -70927006 - L2 LINE L2 -1165 2149 2030 1929 139 68 9 chr5 128703196 128703520 -70926630 - MER61A LTR ERV1 0 343 1 513 279 223 56 chr5 128703534 128703961 -70926189 - L2 LINE L2 -2753 561 64 333 0 0 0 chr5 128704217 128704254 -70925896 + (TG)n Simple_repeat Simple_repeat 2 38 0 222 37 0 0 chr5 128704254 128704281 -70925869 + (GA)n Simple_repeat Simple_repeat 2 28 0 1666 183 134 66 chr5 128704281 128704691 -70925459 - MLT2B2 LTR ERVL -77 438 1 222 240 20 0 chr5 128704906 128704956 -70925194 + L2 LINE L2 3262 3312 -1 207 0 0 0 chr5 128705016 128705039 -70925111 + (A)n Simple_repeat Simple_repeat 1 23 0 2375 88 0 3 chr5 128706437 128706733 -70923417 - AluSx SINE Alu -16 296 2 192 149 0 0 chr5 128707215 128707262 -70922888 + (TA)n Simple_repeat Simple_repeat 2 48 0 294 232 12 30 chr5 128707420 128707584 -70922566 + GA-rich Low_complexity Low_complexity 3 163 0 238 256 51 8 chr5 128709035 128709152 -70920998 + L1ME LINE L1 5726 5847 -274 243 156 0 0 chr5 128709174 128709219 -70920931 + LTR66 LTR ERVL 395 439 -171 260 241 0 0 chr5 128710155 128710213 -70919937 - L2 LINE L2 0 3313 3256 193 206 47 9 chr5 128710922 128711029 -70919121 + GA-rich Low_complexity Low_complexity 3 113 0 61 15 0 0 chr5 128711650 128711718 -70918432 + AT_rich Low_complexity Low_complexity 1 68 0 1999 129 0 0 chr5 128711884 128712187 -70917963 - AluSx SINE Alu 0 316 14 5554 151 106 56 chr5 128712289 128713462 -70916688 + Tigger3b DNA MER2_type 1 1231 0 960 296 66 30 chr5 128715516 128716347 -70913803 + L1ME LINE L1 678 1450 -4632 1600 201 139 3 chr5 128716356 128716730 -70913420 + MSTB1 LTR MaLR 4 428 -4 3269 232 80 18 chr5 128716809 128717704 -70912446 + L1M1 LINE L1 24 974 -6591 267 375 71 30 chr5 128717818 128718085 -70912065 - L2 LINE L2 -731 2583 2306 1770 168 3 3 chr5 128719936 128720233 -70909917 + AluSx SINE Alu 9 305 -7 24 32 0 0 chr5 128720390 128720421 -70909729 + AT_rich Low_complexity Low_complexity 1 31 0 2040 220 40 77 chr5 128720547 128721264 -70908886 - LTR8 LTR ERV1 0 691 1 323 293 57 0 chr5 128721287 128721393 -70908757 - MIR SINE MIR -12 250 139 408 285 15 44 chr5 128721430 128721567 -70908583 - MIR SINE MIR -101 161 29 21 0 0 0 chr5 128722016 128722037 -70908113 + AT_rich Low_complexity Low_complexity 1 21 0 528 37 49 0 chr5 128723948 128724030 -70906120 + (TTTC)n Simple_repeat Simple_repeat 2 87 0 2664 66 0 3 chr5 128724035 128724383 -70905767 - L1PA5 LINE L1 0 6154 5808 358 281 8 33 chr5 128724844 128724965 -70905185 + MIR3 SINE MIR 70 187 -21 303 28 0 0 chr5 128725576 128725612 -70904538 + (TG)n Simple_repeat Simple_repeat 1 36 0 245 250 0 16 chr5 128725777 128725841 -70904309 - MER20B DNA MER1_type -607 176 114 661 244 26 31 chr5 128726533 128726726 -70903424 - MIR SINE MIR 0 262 71 282 319 0 0 chr5 128726847 128726919 -70903231 + MIR SINE MIR 30 101 -161 263 292 17 25 chr5 128726933 128727053 -70903097 + (TG)n Simple_repeat Simple_repeat 1 119 0 211 219 12 12 chr5 128727072 128727154 -70902996 + (TG)n Simple_repeat Simple_repeat 2 83 0 234 270 14 14 chr5 128727170 128727244 -70902906 + (TG)n Simple_repeat Simple_repeat 2 75 0 222 150 0 0 chr5 128727260 128727300 -70902850 + (TG)n Simple_repeat Simple_repeat 2 41 0 306 281 16 16 chr5 128727316 128727437 -70902713 + (TG)n Simple_repeat Simple_repeat 1 121 0 192 77 0 0 chr5 128727456 128727482 -70902668 + (TG)n Simple_repeat Simple_repeat 2 27 0 213 261 135 18 chr5 128731545 128731656 -70898494 - MIR3 SINE MIR -3 205 82 253 245 9 57 chr5 128732499 128732554 -70897596 + LTR67 LTR ERVL 450 499 -58 1218 242 30 25 chr5 128732554 128732922 -70897228 - MLT1A2 LTR MaLR -4 370 1 253 245 9 57 chr5 128732922 128732972 -70897178 + LTR67 LTR ERVL 499 550 -7 30 27 0 0 chr5 128733172 128733209 -70896941 + AT_rich Low_complexity Low_complexity 1 37 0 1578 266 93 26 chr5 128733336 128733991 -70896159 - L1ME2 LINE L1 -71 6093 5395 26 0 0 0 chr5 128734370 128734396 -70895754 + AT_rich Low_complexity Low_complexity 1 26 0 285 326 11 0 chr5 128734401 128734493 -70895657 - L2 LINE L2 0 3313 3221 192 309 15 15 chr5 128734693 128734761 -70895389 - L2 LINE L2 -37 3276 3209 273 356 119 29 chr5 128735083 128735428 -70894722 + L2 LINE L2 1831 2206 -1108 213 232 18 18 chr5 128735660 128735716 -70894434 + L2 LINE L2 2998 3053 -219 243 88 0 0 chr5 128735903 128735937 -70894213 + (CA)n Simple_repeat Simple_repeat 1 34 0 2181 226 25 59 chr5 128735938 128736565 -70893585 - MER82 DNA MER2_type -1 652 47 342 271 104 0 chr5 128738132 128738228 -70891922 - LTR33 LTR ERVL -389 132 27 252 122 0 0 chr5 128738244 128738285 -70891865 + (CA)n Simple_repeat Simple_repeat 2 42 0 240 22 43 43 chr5 128738323 128738369 -70891781 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 2068 289 40 20 chr5 128738742 128739636 -70890514 + L1MCb LINE L1 1 912 -5133 211 175 29 39 chr5 128739643 128739746 -70890404 + (TATATG)n Simple_repeat Simple_repeat 3 104 0 2368 269 45 16 chr5 128739825 128740953 -70889197 + L1MCb LINE L1 979 2358 -4387 1967 218 73 24 chr5 128740953 128741403 -70888747 + MER70A LTR ERVL 1 472 0 2368 269 45 16 chr5 128741403 128741824 -70888326 + L1MCb LINE L1 2358 2765 -3980 240 163 0 0 chr5 128743669 128743712 -70886438 + (TG)n Simple_repeat Simple_repeat 2 44 0 960 231 37 17 chr5 128744486 128744780 -70885370 + L1MC3 LINE L1 6804 7103 -682 239 307 27 0 chr5 128744785 128744860 -70885290 + MLT1C LTR MaLR 46 122 -445 747 259 180 5 chr5 128744867 128745234 -70884916 + L1MD3 LINE L1 7405 7835 -160 733 238 60 20 chr5 128745274 128745522 -70884628 + MLT1C LTR MaLR 206 463 -4 288 224 53 0 chr5 128745528 128745604 -70884546 + L1MD3 LINE L1 7836 7915 -80 632 203 49 0 chr5 128745616 128745759 -70884391 - MER93b LTR ERV1 -36 337 188 393 238 0 0 chr5 128745793 128745873 -70884277 - MER93a LTR ERV1 -322 80 1 453 110 24 12 chr5 128745874 128745956 -70884194 + L1MD3 LINE L1 7913 7995 0 1400 171 98 51 chr5 128746091 128746447 -70883703 - THE1C LTR MaLR -2 373 1 4243 198 138 4 chr5 128746447 128747441 -70882709 - THE1C-int LTR MaLR 0 1651 525 5013 12 0 0 chr5 128747441 128748006 -70882144 - L1PA2 LINE L1 -2 6153 5589 5264 42 0 3 chr5 128748006 128748693 -70881457 + L1P LINE L1 4571 5255 -891 2367 138 151 0 chr5 128748659 128749123 -70881027 - THE1C-int LTR MaLR -1045 535 2 * 1726 152 53 51 chr5 128749124 128749498 -70880652 - THE1C LTR MaLR 0 375 1 180 0 0 0 chr5 128749856 128749876 -70880274 + (TTTTTA)n Simple_repeat Simple_repeat 3 22 0 457 183 0 0 chr5 128751676 128751758 -70878392 - MER20 DNA MER1_type -1 218 137 1048 253 59 7 chr5 128751765 128751848 -70878302 + MLT2D LTR ERVL 1 78 -336 216 0 0 0 chr5 128751848 128751872 -70878278 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 249 33 0 0 chr5 128751871 128751901 -70878249 + (TG)n Simple_repeat Simple_repeat 2 31 0 1048 253 59 7 chr5 128751872 128752121 -70878029 + MLT2D LTR ERVL 78 320 -94 1235 164 25 43 chr5 128752124 128752405 -70877745 - MSTB2 LTR MaLR -1 456 181 495 167 0 0 chr5 128752426 128752516 -70877634 + MSTC LTR MaLR 17 106 -322 1364 241 60 20 chr5 128752701 128753099 -70877051 + MLT1B-int LTR MaLR 953 1366 -5 1380 196 30 77 chr5 128753103 128753505 -70876645 + MLT1B LTR MaLR 8 390 0 372 226 0 130 chr5 128753506 128753652 -70876498 - MER20 DNA MER1_type -88 131 5 297 331 69 56 chr5 128754410 128754570 -70875580 - L2 LINE L2 -174 3098 2937 204 328 0 0 chr5 128754898 128754959 -70875191 + L2 LINE L2 1876 1936 -1378 183 324 50 50 chr5 128757300 128757479 -70872671 + MIR3 SINE MIR 19 197 -11 3093 44 5 0 chr5 128757676 128758083 -70872067 - L1PA4 LINE L1 -1139 5007 4599 7407 35 5 0 chr5 128758083 128759217 -70870933 + L1PA4 LINE L1 5017 6154 -1 1393 183 45 85 chr5 128759272 128759741 -70870409 + LTR7 LTR ERV1 1 450 0 195 294 185 0 chr5 128760690 128760782 -70869368 - L2 LINE L2 -10 3303 3195 342 194 0 0 chr5 128761341 128761413 -70868737 + (TCCA)n Simple_repeat Simple_repeat 3 74 0 198 267 59 59 chr5 128761612 128761713 -70868437 + MIR SINE MIR 41 141 -121 2138 117 34 28 chr5 128761719 128762071 -70868079 + THE1B LTR MaLR 1 354 -10 768 245 101 46 chr5 128762069 128762416 -70867734 + MSTD LTR MaLR 31 396 0 * 403 323 8 0 chr5 128762432 128762565 -70867585 + MIR SINE MIR 124 257 -5 1427 202 34 9 chr5 128762565 128762887 -70867263 - MLT1A2 LTR MaLR -2 372 43 418 236 0 0 chr5 128762878 128762967 -70867183 - MLT1A2 LTR MaLR -243 131 43 * 538 244 31 0 chr5 128762958 128763085 -70867065 - MLT1A2 LTR MaLR -243 131 1 270 326 22 11 chr5 128764813 128764905 -70865245 - MIR SINE MIR -155 107 15 1085 211 42 57 chr5 128765028 128765293 -70864857 + AluJo SINE Alu 49 309 -3 467 335 58 12 chr5 128765308 128765550 -70864600 + L3 LINE CR1 1320 1572 -5 26 30 0 0 chr5 128765698 128765731 -70864419 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 128766242 128766265 -70863885 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 128766760 128766782 -70863368 + AT_rich Low_complexity Low_complexity 1 22 0 483 316 100 32 chr5 128767283 128767714 -70862436 - L2 LINE L2 -1154 2160 1701 1144 221 80 27 chr5 128767853 128768152 -70861998 - MER58B DNA MER1_type 0 341 27 2243 113 0 0 chr5 128768206 128768515 -70861635 - AluSg SINE Alu -1 309 1 355 342 84 5 chr5 128768534 128768742 -70861408 + MIR SINE MIR 17 241 -21 243 264 0 0 chr5 128769127 128769180 -70860970 + MER58B DNA MER1_type 280 332 -9 2198 89 0 4 chr5 128769182 128769502 -70860648 + AluSc SINE Alu 1 319 0 31 0 0 0 chr5 128870662 128870693 -70759457 + AT_rich Low_complexity Low_complexity 1 31 0 36 40 0 0 chr5 128871020 128871070 -70759080 + AT_rich Low_complexity Low_complexity 1 50 0 364 231 139 0 chr5 128872608 128872716 -70757434 - L2 LINE L2 0 3313 3191 512 301 70 70 chr5 128873441 128873929 -70756221 - L3 LINE CR1 -174 1403 916 333 227 9 45 chr5 128874152 128874262 -70755888 + L1MA9 LINE L1 6133 6238 -74 229 65 0 0 chr5 128874262 128874308 -70755842 - LTR66 LTR ERVL -171 439 394 190 191 15 15 chr5 128874311 128874379 -70755771 + (TA)n Simple_repeat Simple_repeat 2 69 0 284 64 56 19 chr5 128874390 128874451 -70755699 + L1MA9 LINE L1 6224 6291 0 229 286 16 32 chr5 128874597 128874714 -70755436 - MIR SINE MIR -61 147 34 311 289 132 31 chr5 128874851 128875010 -70755140 + MIR SINE MIR 84 258 -4 24 32 0 0 chr5 128876121 128876152 -70753998 + AT_rich Low_complexity Low_complexity 1 31 0 625 244 92 39 chr5 128876417 128876646 -70753504 + MIR SINE MIR 5 245 -17 545 67 0 13 chr5 128876719 128876794 -70753356 + Alu SINE Alu 2 75 -236 1846 208 11 22 chr5 128876999 128877397 -70752753 + MLT1B LTR MaLR 1 422 -6 258 284 0 23 chr5 128878014 128878102 -70752048 - L1MC4 LINE L1 -1342 6700 6615 207 321 0 0 chr5 128878124 128878264 -70751886 + (TA)n Simple_repeat Simple_repeat 1 140 0 1926 171 0 0 chr5 128879885 128880184 -70749966 - AluSx SINE Alu -13 299 1 22 0 0 0 chr5 128880701 128880723 -70749427 + AT_rich Low_complexity Low_complexity 1 22 0 577 149 0 21 chr5 128880737 128880831 -70749319 - FRAM SINE Alu -14 162 71 235 229 33 16 chr5 128880834 128880895 -70749255 - MLT1K LTR MaLR -5 585 524 1762 178 55 0 chr5 128883289 128883860 -70746290 - L1P5 LINE L1 -671 5480 4885 259 267 13 0 chr5 128883938 128884013 -70746137 - MER103 DNA DNA -77 89 14 2332 62 0 7 chr5 128886783 128887091 -70743059 - AluY SINE Alu -5 306 1 24 67 0 0 chr5 128887874 128887919 -70742231 + AT_rich Low_complexity Low_complexity 1 45 0 206 143 61 0 chr5 128888205 128888254 -70741896 + (TA)n Simple_repeat Simple_repeat 1 52 0 1739 135 21 31 chr5 128888254 128888543 -70741607 - AluSx SINE Alu -26 286 1 679 84 0 21 chr5 128889287 128889382 -70740768 + L1PA8 LINE L1 6073 6165 -7 191 133 44 67 chr5 128889646 128889691 -70740459 - L3 LINE CR1 -369 1208 1165 2544 66 0 0 chr5 128889927 128890301 -70739849 - L1P3 LINE L1 -581 5573 5200 415 203 42 0 chr5 128890402 128890505 -70739645 - L1MEc LINE L1 -3951 2264 2181 269 325 125 12 chr5 128890775 128890935 -70739215 - MLT1K LTR MaLR -256 332 155 632 258 113 38 chr5 128891387 128891627 -70738523 + MLT1G1 LTR MaLR 43 300 -295 2021 171 3 28 chr5 128893213 128893576 -70736574 - MER47A DNA MER2_type 0 366 13 2024 132 3 0 chr5 128894055 128894350 -70735800 - AluSx SINE Alu -6 306 11 2303 119 47 39 chr5 128894384 128894745 -70735405 + THE1B LTR MaLR 1 364 0 2293 86 3 26 chr5 128894896 128895199 -70734951 - AluY SINE Alu -15 296 1 823 244 39 13 chr5 128895826 128896060 -70734090 - MER65B LTR ERV1 0 531 292 237 272 70 51 chr5 128897782 128897940 -70732210 - HAL1 LINE L1 -1349 1158 998 21 0 0 0 chr5 128898920 128898941 -70731209 + AT_rich Low_complexity Low_complexity 1 21 0 2413 81 0 3 chr5 128899747 128900044 -70730106 - AluSc SINE Alu -13 296 1 1711 158 60 20 chr5 128900256 128900722 -70729428 - MER51B LTR ERV1 0 377 1 353 278 81 52 chr5 128901642 128901815 -70728335 + MIR SINE MIR 31 208 -54 550 135 39 0 chr5 128902051 128902155 -70727995 - L1P LINE L1 -746 5415 5308 1905 54 0 0 chr5 128902155 128902378 -70727772 - AluY SINE Alu 0 311 89 23 33 0 0 chr5 128903116 128903146 -70727004 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 128903629 128903651 -70726499 + AT_rich Low_complexity Low_complexity 1 22 0 2613 30 0 0 chr5 128904190 128904487 -70725663 + AluY SINE Alu 1 297 -14 7327 136 26 15 chr5 128906056 128906174 -70723976 - Tigger1 DNA MER2_type -834 1584 1469 2016 134 0 20 chr5 128906174 128906479 -70723671 - AluSx SINE Alu -1 311 13 7327 136 26 15 chr5 128906479 128907560 -70722590 - Tigger1 DNA MER2_type -949 1469 372 15950 123 80 17 chr5 128907661 128910413 -70719737 - L1PBa LINE L1 -3938 2925 1 1460 230 14 0 chr5 128910446 128910733 -70719417 - AluJo SINE Alu -21 291 1 1364 286 72 22 chr5 128910771 128911355 -70718795 + HsTC2 DNA Tc2 1272 1884 -14 180 282 197 0 chr5 128911407 128911478 -70718672 - MIR SINE MIR -177 85 1 2396 91 7 3 chr5 128911652 128911960 -70718190 + AluSx SINE Alu 1 309 -3 267 31 0 0 chr5 128913291 128913323 -70716827 + (TTCC)n Simple_repeat Simple_repeat 3 34 0 2121 105 0 0 chr5 128913326 128913603 -70716547 - AluSc SINE Alu -32 277 1 332 273 31 39 chr5 128913623 128913751 -70716399 + MER94 DNA DNA 3 129 -5 206 31 0 31 chr5 128914806 128914838 -70715312 + (TTAAA)n Simple_repeat Simple_repeat 3 33 0 316 137 20 0 chr5 128915349 128915400 -70714750 - Tigger1 DNA MER2_type -2366 52 1 38 96 0 0 chr5 128915548 128915663 -70714487 + AT_rich Low_complexity Low_complexity 1 115 0 6152 217 32 26 chr5 128915748 128916723 -70713427 + L1PA11 LINE L1 217 1185 -6399 2911 187 16 62 chr5 128916723 128917365 -70712785 - LTR9 LTR ERV1 0 612 1 6152 217 32 26 chr5 128917365 128919227 -70710923 + L1PA11 LINE L1 1185 3874 -3710 1958 168 0 0 chr5 128919227 128919512 -70710638 + AluSx SINE Alu 1 285 -27 8442 163 16 6 chr5 128919512 128920997 -70709153 + L1PA11 LINE L1 5261 6761 -851 2582 64 0 0 chr5 128920997 128921308 -70708842 + AluY SINE Alu 1 311 0 8442 163 16 6 chr5 128921308 128922152 -70707998 + L1PA11 LINE L1 6761 7595 -17 23 54 0 0 chr5 128922322 128922359 -70707791 + AT_rich Low_complexity Low_complexity 1 37 0 237 341 90 18 chr5 128922776 128922943 -70707207 - MIR SINE MIR 0 262 84 212 227 0 0 chr5 128923036 128923080 -70707070 + (CAG)n Simple_repeat Simple_repeat 2 45 0 374 307 52 39 chr5 128924432 128924632 -70705518 - MIR SINE MIR -59 203 3 2151 106 10 13 chr5 128925281 128925593 -70704557 + AluSq SINE Alu 3 313 0 289 281 124 51 chr5 128927366 128927544 -70702606 - MIR3 SINE MIR -11 197 7 214 313 60 0 chr5 128927753 128927820 -70702330 + L2 LINE L2 3137 3207 -65 1735 183 10 0 chr5 128929883 128930178 -70699972 - AluJb SINE Alu -14 298 1 3592 150 21 61 chr5 128930615 128931335 -70698815 - LTR8 LTR ERV1 0 691 1 488 266 42 62 chr5 128931515 128931804 -70698346 + L2 LINE L2 2695 2977 -337 442 297 58 48 chr5 128931833 128932126 -70698024 + L2 LINE L2 2945 3240 -73 1163 115 88 10 chr5 128932126 128932318 -70697832 + MER30 DNA MER1_type 19 225 -5 202 154 26 0 chr5 128932722 128932761 -70697389 + (TTA)n Simple_repeat Simple_repeat 3 42 0 274 275 33 11 chr5 128932912 128933003 -70697147 - MLT1J LTR MaLR -325 186 94 450 203 0 0 chr5 128934701 128934780 -70695370 + MER2 DNA MER2_type 1 79 -266 2283 117 0 0 chr5 128935709 128936018 -70694132 - AluY SINE Alu -2 309 1 2166 92 4 4 chr5 128936928 128937234 -70692916 - AluSp SINE Alu 0 307 2 22 0 0 0 chr5 128938299 128938321 -70691829 + AT_rich Low_complexity Low_complexity 1 22 0 1976 89 4 0 chr5 128938806 128939064 -70691086 + AluY SINE Alu 1 259 -52 315 71 0 0 chr5 128939065 128939107 -70691043 + (CA)n Simple_repeat Simple_repeat 1 42 0 334 204 19 0 chr5 128940967 128941070 -70689080 + (TA)n Simple_repeat Simple_repeat 1 105 0 3929 144 35 20 chr5 128941070 128941762 -70688388 - MER57B-int LTR ERV1 -4301 1645 944 3483 143 25 2 chr5 128941772 128942331 -70687819 - MER57B-int LTR ERV1 -6872 665 94 284 143 71 18 chr5 128942331 128942387 -70687763 - MER57B-int LTR ERV1 -7385 152 94 * 340 152 61 15 chr5 128942377 128942443 -70687707 - MER57B-int LTR ERV1 -7375 162 94 340 152 61 15 chr5 128942433 128942499 -70687651 - MER57B-int LTR ERV1 -7375 162 94 340 152 61 15 chr5 128942489 128942555 -70687595 - MER57B-int LTR ERV1 -7375 162 94 * 361 136 61 15 chr5 128942545 128942611 -70687539 - MER57B-int LTR ERV1 -7375 162 94 * 558 136 0 11 chr5 128942601 128942689 -70687461 - MER57B-int LTR ERV1 -7375 162 76 385 119 0 17 chr5 128942697 128942756 -70687394 - MER57B-int LTR ERV1 -7403 134 77 688 191 15 7 chr5 128942762 128942898 -70687252 - MER57B-int LTR ERV1 -7400 137 1 2741 99 38 9 chr5 128942898 128943320 -70686830 - MER57B LTR ERV1 0 434 1 622 296 117 68 chr5 128943815 128944210 -70685940 - L2 LINE L2 -1 3312 2899 233 29 29 0 chr5 128946670 128946704 -70683446 + (TA)n Simple_repeat Simple_repeat 1 35 0 429 252 102 0 chr5 128947255 128947382 -70682768 + MIR SINE MIR 100 239 -23 2810 185 63 92 chr5 128947614 128948420 -70681730 - LTR39 LTR ERV1 0 783 1 21 0 0 0 chr5 128949656 128949677 -70680473 + AT_rich Low_complexity Low_complexity 1 21 0 415 325 25 25 chr5 128950283 128950440 -70679710 - MER5A DNA MER1_type -7 182 26 360 289 86 0 chr5 128950511 128950639 -70679511 - MIR SINE MIR -4 258 120 183 143 82 41 chr5 128950699 128950748 -70679402 + MIR3 SINE MIR 121 171 -37 300 137 42 42 chr5 128951148 128951243 -70678907 + (TATAA)n Simple_repeat Simple_repeat 5 99 0 710 209 0 0 chr5 128951250 128951379 -70678771 - FLAM_C SINE Alu -14 129 1 24 32 0 0 chr5 128952231 128952262 -70677888 + AT_rich Low_complexity Low_complexity 1 31 0 833 81 9 0 chr5 128952808 128952919 -70677231 - AluSc SINE Alu -24 285 174 335 248 28 48 chr5 128953117 128953288 -70676862 + MER34 LTR ERV1 411 540 -2 892 195 32 5 chr5 128953502 128953692 -70676458 - LTR1B LTR ERV1 0 826 632 779 239 118 23 chr5 128953695 128954001 -70676149 - MER90 LTR ERV1 -240 335 1 944 254 65 30 chr5 128954051 128954344 -70675806 - L1ME1 LINE L1 0 6166 5856 2674 153 7 5 chr5 128954344 128954787 -70675363 - MER83 LTR ERV1 -4 444 1 944 254 65 30 chr5 128954787 128954863 -70675287 - L1ME1 LINE L1 -310 5856 5784 2073 131 36 28 chr5 128954993 128955351 -70674799 + THE1B LTR MaLR 4 364 0 343 316 53 42 chr5 128955702 128955965 -70674185 + L1MC/D LINE L1 5269 5534 -2274 2525 114 14 0 chr5 128956827 128957186 -70672964 + THE1B LTR MaLR 1 364 0 25 0 0 0 chr5 128957335 128957360 -70672790 + AT_rich Low_complexity Low_complexity 1 25 0 2532 217 103 53 chr5 128958091 128958627 -70671523 - L1MB7 LINE L1 -28 7575 7067 2097 117 7 7 chr5 128958627 128958926 -70671224 - AluSx SINE Alu -13 299 1 2532 217 103 53 chr5 128958926 128959453 -70670697 - L1MB7 LINE L1 -536 7067 6568 857 136 0 0 chr5 128959453 128959578 -70670572 - FLAM_C SINE Alu -7 126 2 2532 217 103 53 chr5 128959578 128960079 -70670071 - L1MB7 LINE L1 -1035 6568 5934 * 3707 134 6 55 chr5 128960075 128960797 -70669353 - L1PB3 LINE L1 -23 6131 5446 2869 254 67 30 chr5 128960815 128962171 -70667979 - L1MB7 LINE L1 -1655 5910 4504 4126 52 11 0 chr5 128962182 128962702 -70667448 - L1PA7 LINE L1 -13 6141 5616 2374 100 0 0 chr5 128963801 128964110 -70666040 + AluY SINE Alu 1 309 -2 21 36 0 0 chr5 128964116 128964144 -70666006 + AT_rich Low_complexity Low_complexity 1 28 0 1704 109 4 0 chr5 128966012 128966242 -70663908 + AluSg/x SINE Alu 69 299 -11 27 49 0 0 chr5 128966611 128966652 -70663498 + AT_rich Low_complexity Low_complexity 1 41 0 252 333 0 11 chr5 128966969 128967062 -70663088 - MIR SINE MIR -10 252 161 1071 154 0 0 chr5 128967306 128967455 -70662695 + AluSq/x SINE Alu 1 149 -163 21 0 0 0 chr5 128969946 128969967 -70660183 + AT_rich Low_complexity Low_complexity 1 21 0 1469 279 89 20 chr5 128970415 128971063 -70659087 + L1ME2 LINE L1 5458 6150 -14 549 188 0 0 chr5 128971642 128971759 -70658391 - L1MA4 LINE L1 -4 6296 6180 2693 198 19 8 chr5 128971763 128972394 -70657756 - L1MB7 LINE L1 -3264 4301 3664 350 153 17 0 chr5 128972394 128972453 -70657697 - AluJ/FRAM SINE Alu -10 292 233 2571 244 63 26 chr5 128972570 128973581 -70656569 - L1MB7 LINE L1 -4211 3354 2306 * 4390 188 7 11 chr5 128973579 128974420 -70655730 - L1MB7 LINE L1 -4483 2082 1245 190 191 48 0 chr5 128976312 128976354 -70653796 + L2 LINE L2 3224 3267 -5 5489 90 37 3 chr5 128977131 128977885 -70652265 - LTR17 LTR ERV1 0 780 1 513 313 21 14 chr5 128978231 128978375 -70651775 - MER91A DNA MER1_type -44 152 8 180 244 22 0 chr5 128978684 128978729 -70651421 + L2 LINE L2 3248 3293 -20 22 0 0 0 chr5 128979274 128979296 -70650854 + AT_rich Low_complexity Low_complexity 1 22 0 225 337 99 24 chr5 128981821 128982182 -70647968 - L2 LINE L2 -200 3072 2673 229 295 133 0 chr5 128982270 128982375 -70647775 - L2 LINE L2 -7 3306 3188 555 288 37 84 chr5 128985907 128986313 -70643837 + MLT1J LTR MaLR 123 509 -2 180 370 90 0 chr5 128986701 128986801 -70643349 + MIR3 SINE MIR 83 191 -17 2719 35 0 0 chr5 128987117 128987433 -70642717 + AluYb8 SINE Alu 1 316 -2 22 0 0 0 chr5 128988023 128988045 -70642105 + AT_rich Low_complexity Low_complexity 1 22 0 2206 116 0 25 chr5 128988074 128988393 -70641757 - AluSq SINE Alu -2 311 1 197 306 16 32 chr5 128988537 128988599 -70641551 - L2 LINE L2 -97 3175 3115 239 53 0 26 chr5 128989918 128989956 -70640194 + (TTG)n Simple_repeat Simple_repeat 1 37 0 2168 34 34 0 chr5 128989956 128990225 -70639925 - AluY SINE Alu -33 278 1 466 293 55 30 chr5 128990598 128990762 -70639388 - MIR SINE MIR -87 175 8 268 226 16 16 chr5 128993232 128993294 -70636856 + MIR SINE MIR 63 124 -138 302 297 19 77 chr5 128995390 128995545 -70634605 - MIR SINE MIR -20 242 97 207 0 0 0 chr5 128995917 128995940 -70634210 + (A)n Simple_repeat Simple_repeat 1 23 0 1590 250 92 13 chr5 128996047 128996644 -70633506 + L1ME2 LINE L1 5498 6141 -23 1491 172 69 11 chr5 128997313 128997662 -70632488 - LOR1b LTR ERV1 -92 369 1 24 0 0 0 chr5 128999331 128999355 -70630795 + AT_rich Low_complexity Low_complexity 1 24 0 2243 116 0 3 chr5 128999688 128999999 -70630151 - AluSg SINE Alu 0 310 1 40 79 0 0 chr5 129000623 129000712 -70629438 + AT_rich Low_complexity Low_complexity 1 89 0 2225 115 7 0 chr5 129001564 129001869 -70628281 + AluSg SINE Alu 1 307 -3 31 26 0 0 chr5 129001940 129001978 -70628172 + AT_rich Low_complexity Low_complexity 1 38 0 283 364 8 8 chr5 129002264 129002382 -70627768 + MIR3 SINE MIR 40 157 -51 235 265 36 24 chr5 129002494 129002577 -70627573 + MIR SINE MIR 74 157 -105 211 150 0 25 chr5 129002694 129002734 -70627416 + (TTA)n Simple_repeat Simple_repeat 1 39 0 1804 144 3 17 chr5 129002777 129003069 -70627081 + AluSx SINE Alu 1 288 -24 1307 208 63 40 chr5 129003253 129003632 -70626518 - MLT1B LTR MaLR -2 388 1 1963 149 3 3 chr5 129004336 129004632 -70625518 + AluSx SINE Alu 1 296 -16 1351 200 18 18 chr5 129004706 129004986 -70625164 + AluJo SINE Alu 12 291 -21 482 308 77 75 chr5 129005943 129006318 -70623832 + L1MEd LINE L1 22 400 -5719 1826 149 59 12 chr5 129006318 129006640 -70623510 + MER1B DNA MER1_type 1 337 0 482 308 77 75 chr5 129006640 129006953 -70623197 + L1MEd LINE L1 400 711 -5408 281 298 43 7 chr5 129007050 129007191 -70622959 + L1MEd LINE L1 921 1066 -5053 22 35 0 0 chr5 129007263 129007292 -70622858 + AT_rich Low_complexity Low_complexity 1 29 0 702 246 22 36 chr5 129007366 129007590 -70622560 - Charlie1 DNA MER1_type -1115 1646 1426 312 341 150 4 chr5 129008391 129008617 -70621533 + L1MEd LINE L1 2172 2430 -3699 256 221 70 0 chr5 129008626 129008712 -70621438 - MLT1H LTR MaLR 0 549 458 273 263 88 62 chr5 129008870 129009030 -70621120 - MLT1H LTR MaLR -376 173 10 1840 97 0 0 chr5 129009070 129009317 -70620833 + AluSc SINE Alu 62 308 -1 230 204 0 0 chr5 129009554 129009603 -70620547 - L1ME3 LINE L1 -8 6154 6106 1559 279 153 23 chr5 129009622 129011244 -70618906 - L1MEc LINE L1 -2110 4430 2597 417 275 63 16 chr5 129011266 129011502 -70618648 - L1MEc LINE L1 -3938 2602 2361 22 35 0 0 chr5 129013284 129013313 -70616837 + AT_rich Low_complexity Low_complexity 1 29 0 696 244 39 13 chr5 129017849 129018079 -70612071 + MER65B LTR ERV1 296 531 0 2289 86 3 26 chr5 129018706 129019009 -70611141 + AluY SINE Alu 1 296 -15 2136 119 47 39 chr5 129019160 129019521 -70610629 - THE1B LTR MaLR 0 364 1 2285 115 3 0 chr5 129019544 129019849 -70610301 + AluSx SINE Alu 1 306 -6 1962 171 3 28 chr5 129020328 129020691 -70609459 + MER47A DNA MER2_type 13 366 0 219 277 0 0 chr5 129022514 129022561 -70607589 - MIR3 SINE MIR -49 159 113 1962 163 18 76 chr5 129022928 129023063 -70607087 + L1MB2 LINE L1 5693 5834 -337 2309 62 7 23 chr5 129023063 129023370 -70606780 + AluY SINE Alu 1 302 -9 1962 163 18 76 chr5 129023370 129023467 -70606683 + L1MB2 LINE L1 5834 5935 -236 2306 113 0 3 chr5 129023467 129023778 -70606372 - AluSx SINE Alu -2 310 1 1962 163 18 76 chr5 129023778 129024048 -70606102 + L1MB2 LINE L1 5935 6170 -1 207 69 0 0 chr5 129024074 129024103 -70606047 + (CAA)n Simple_repeat Simple_repeat 2 30 0 517 325 5 38 chr5 129024344 129024556 -70605594 + MIR SINE MIR 48 252 -10 2143 116 19 66 chr5 129025981 129026192 -70603958 - THE1B LTR MaLR -4 360 172 2183 71 0 0 chr5 129026192 129026481 -70603669 + AluY SINE Alu 17 305 0 2143 116 19 66 chr5 129026481 129026646 -70603504 - THE1B LTR MaLR -192 172 1 837 305 51 33 chr5 129027291 129027685 -70602465 - MLT1J1 LTR MaLR -12 434 34 2074 125 14 0 chr5 129029561 129029856 -70600294 - AluY SINE Alu -12 299 1 2213 231 142 30 chr5 129029891 129030548 -70599602 - MER21B LTR ERV1 -114 749 20 354 191 0 143 chr5 129030570 129030675 -70599475 - MER21B LTR ERV1 -773 90 1 326 232 0 29 chr5 129031040 129031178 -70598972 + GA-rich Low_complexity Low_complexity 1 134 0 439 273 131 32 chr5 129033875 129034226 -70595924 + L2 LINE L2 2688 3068 -245 351 302 16 24 chr5 129034228 129034354 -70595796 + L2 LINE L2 3169 3293 -20 231 318 40 32 chr5 129035037 129035163 -70594987 + L2 LINE L2 2368 2494 -820 1712 152 168 8 chr5 129035935 129036304 -70593846 + MSTA LTR MaLR 1 428 0 287 279 93 52 chr5 129036984 129037156 -70592994 + L2 LINE L2 2848 3026 -246 220 50 0 50 chr5 129037766 129037806 -70592344 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 694 263 107 7 chr5 129038436 129038744 -70591406 + Tigger8 DNA MER2_type 286 624 -42 512 259 115 33 chr5 129038781 129039024 -70591126 - L1ME3A LINE L1 -12 6158 5896 207 141 14 56 chr5 129039027 129039098 -70591052 + CT-rich Low_complexity Low_complexity 2 69 0 494 287 88 25 chr5 129039101 129039664 -70590486 - L1ME3A LINE L1 -280 5898 5288 24 67 0 0 chr5 129040012 129040057 -70590093 + AT_rich Low_complexity Low_complexity 1 45 0 391 299 94 26 chr5 129040112 129040346 -70589804 - L1ME3A LINE L1 -1198 4948 4699 1390 175 7 82 chr5 129040656 129040998 -70589152 + AluJb SINE Alu 3 321 0 189 306 0 0 chr5 129041685 129041734 -70588416 + L2 LINE L2 309 357 -2957 192 327 70 45 chr5 129042327 129042483 -70587667 + L2 LINE L2 1273 1432 -1882 771 249 34 67 chr5 129042485 129042668 -70587482 + L1MCc LINE L1 17 188 -6235 2112 53 3 147 chr5 129042668 129043029 -70587121 + AluY SINE Alu 1 309 -2 771 249 34 67 chr5 129043029 129043142 -70587008 + L1MCc LINE L1 188 303 -6120 528 285 25 10 chr5 129043175 129043375 -70586775 + L1MCc LINE L1 2242 2444 -4678 910 113 0 149 chr5 129043378 129043572 -70586578 + AluSg/x SINE Alu 137 301 -11 972 275 84 17 chr5 129043669 129044512 -70585638 + L1MCc LINE L1 2575 3424 -3517 1187 98 132 0 chr5 129044545 129044749 -70585401 - L1PA10 LINE L1 0 6168 5938 398 152 0 51 chr5 129044760 129044839 -70585311 + AluJb SINE Alu 208 282 -20 8347 155 42 17 chr5 129044839 129046391 -70583759 - L1P LINE L1 -1849 4297 2708 3339 261 45 31 chr5 129046391 129047844 -70582306 + L1MCc LINE L1 3471 4943 -1998 200 379 61 0 chr5 129047939 129048005 -70582145 + L2 LINE L2 3209 3278 -35 1558 155 206 6 chr5 129048392 129048571 -70581579 - MSTA LTR MaLR 0 428 286 303 28 0 0 chr5 129048571 129048607 -70581543 + (GA)n Simple_repeat Simple_repeat 2 37 0 1558 155 206 6 chr5 129048607 129048782 -70581368 - MSTA LTR MaLR -142 286 3 265 339 73 0 chr5 129049776 129049885 -70580265 - MIR SINE MIR -87 175 59 1550 157 4 0 chr5 129049992 129050227 -70579923 + AluJb SINE Alu 1 236 -76 1386 169 88 9 chr5 129051355 129051741 -70578409 - LTR54 LTR ERV1 -1 509 31 1483 260 104 19 chr5 129051742 129052215 -70577935 - HUERS-P1 LTR ERV1 -411 7126 6614 4183 225 59 65 chr5 129052309 129054645 -70575505 - HUERS-P1 LTR ERV1 -697 5094 2357 321 157 124 62 chr5 129054676 129054899 -70575251 - HUERS-P1 LTR ERV1 -2644 3673 2202 426 227 35 41 chr5 129054958 129055130 -70575020 - HUERS-P1 LTR ERV1 -3013 1923 1753 327 204 0 92 chr5 129055249 129055347 -70574803 + MER34 LTR ERV1 4 92 -450 725 177 0 8 chr5 129055356 129055480 -70574670 + FLAM_C SINE Alu 5 127 -16 279 193 161 78 chr5 129055511 129055703 -70574447 + LTR48B LTR ERV1 142 267 -377 525 254 46 0 chr5 129055790 129055920 -70574230 - HUERS-P1 LTR ERV1 -2452 4306 4171 2231 108 0 3 chr5 129056119 129056416 -70573734 - AluY SINE Alu -15 296 1 575 247 23 25 chr5 129056468 129056705 -70573445 - HUERS-P1 LTR ERV1 -3221 2725 859 3947 120 2 14 chr5 129056819 129057412 -70572738 - LTR8 LTR ERV1 -105 586 1 4845 128 4 18 chr5 129057412 129058811 -70571339 - HUERS-P1 LTR ERV1 0 6263 4789 14476 132 37 27 chr5 129058927 129061895 -70568255 - HUERS-P1 LTR ERV1 -805 5141 2113 812 279 84 29 chr5 129062307 129062758 -70567392 - LTR33 LTR ERVL -8 513 11 241 237 0 21 chr5 129063017 129063114 -70567036 - L1M LINE L1 -2408 5400 5306 362 273 69 69 chr5 129063140 129063529 -70566621 - L1MEd LINE L1 -3111 3018 2630 248 291 45 30 chr5 129063666 129063800 -70566350 - L1MEd LINE L1 -3685 2444 2309 377 331 114 38 chr5 129063955 129064587 -70565563 - L1MEd LINE L1 -4587 1542 871 3429 155 64 26 chr5 129064610 129065299 -70564851 - LTR62 LTR ERVK -2 717 3 21 0 0 0 chr5 129065379 129065400 -70564750 + AT_rich Low_complexity Low_complexity 1 21 0 2222 110 7 0 chr5 129066989 129067298 -70562852 - AluSq SINE Alu -2 311 1 2356 71 0 7 chr5 129067417 129067714 -70562436 - AluY SINE Alu -16 295 1 1938 131 0 39 chr5 129067861 129068173 -70561977 - AluSq SINE Alu -13 300 1 316 327 107 6 chr5 129069964 129070123 -70560027 - LTR16A LTR ERVL -63 387 213 640 245 122 51 chr5 129070253 129070449 -70559701 - MER52A LTR ERV1 -450 1305 1096 * 830 191 104 172 chr5 129070440 129070777 -70559373 - LTR28 LTR ERV1 -676 344 1 474 299 6 48 chr5 129070777 129070944 -70559206 - LTR16A LTR ERVL -234 216 57 2277 151 8 16 chr5 129071960 129072338 -70557812 - THE1C LTR MaLR 0 375 1 321 180 60 0 chr5 129072813 129072913 -70557237 + (TA)n Simple_repeat Simple_repeat 1 106 0 449 85 51 45 chr5 129072922 129073098 -70557052 + (TTATA)n Simple_repeat Simple_repeat 3 179 0 399 348 60 36 chr5 129073482 129073732 -70556418 + MIR SINE MIR 3 258 -4 23 33 0 0 chr5 129074616 129074646 -70555504 + AT_rich Low_complexity Low_complexity 1 30 0 673 82 91 0 chr5 129075705 129075815 -70554335 - L1MA3 LINE L1 -1 6304 6185 2001 108 8 0 chr5 129076559 129076858 -70553292 - AluSx SINE Alu 0 314 14 22 35 0 0 chr5 129077041 129077070 -70553080 + AT_rich Low_complexity Low_complexity 1 29 0 192 55 109 0 chr5 129078037 129078092 -70552058 + (TA)n Simple_repeat Simple_repeat 2 62 0 208 216 0 0 chr5 129078094 129078131 -70552019 + (TG)n Simple_repeat Simple_repeat 2 38 0 279 346 19 44 chr5 129079936 129080095 -70550055 + L2 LINE L2 2777 2931 -383 26 64 0 0 chr5 129080129 129080176 -70549974 + AT_rich Low_complexity Low_complexity 1 47 0 450 273 68 52 chr5 129080234 129080993 -70549157 + L1MEd LINE L1 895 1717 -4593 200 297 0 16 chr5 129081304 129081368 -70548782 - MIR SINE MIR -21 241 179 3164 123 12 0 chr5 129081622 129082116 -70548034 - L1P LINE L1 -2182 3964 3465 341 300 108 9 chr5 129082298 129082621 -70547529 + L1MEd LINE L1 2585 2939 -3190 771 292 84 38 chr5 129082888 129083364 -70546786 + MLT1J LTR MaLR 1 498 -13 382 264 115 58 chr5 129083374 129083548 -70546602 - MIR SINE MIR -44 218 35 222 303 0 20 chr5 129084360 129084459 -70545691 + GA-rich Low_complexity Low_complexity 4 100 0 25 0 0 0 chr5 129084491 129084516 -70545634 + AT_rich Low_complexity Low_complexity 1 25 0 2122 105 0 0 chr5 129084517 129084803 -70545347 - AluSc SINE Alu -23 286 1 482 281 68 58 chr5 129084861 129085256 -70544894 + HAL1 LINE L1 1255 1653 -854 455 215 190 80 chr5 129085341 129085652 -70544498 + HAL1 LINE L1 1849 2193 -314 2375 164 16 16 chr5 129089039 129089472 -70540678 - Tigger2a DNA MER2_type 0 434 2 1106 267 84 16 chr5 129089949 129090320 -70539830 - MSTD LTR MaLR 0 396 1 13762 101 5 0 chr5 129091008 129093008 -70537142 + L1P LINE L1 3332 5341 -805 489 288 47 6 chr5 129093540 129093710 -70536440 - MER5B DNA MER1_type -1 177 1 257 315 47 31 chr5 129094122 129094249 -70535901 + MIR SINE MIR 88 216 -46 32 0 0 0 chr5 129094487 129094519 -70535631 + AT_rich Low_complexity Low_complexity 1 32 0 181 255 132 57 chr5 129094544 129094650 -70535500 + MIR3 SINE MIR 79 192 -16 1883 172 0 0 chr5 129095070 129095361 -70534789 + AluJb SINE Alu 1 291 -21 713 332 50 6 chr5 129095825 129096147 -70534003 - MLT1H1 LTR MaLR -34 521 186 1010 105 53 7 chr5 129097050 129097062 -70533088 + AluSc SINE Alu 119 129 -180 1916 78 108 0 chr5 129097062 129097330 -70532820 + AluSg SINE Alu 1 297 -13 1010 105 53 7 chr5 129097330 129097469 -70532681 + AluSc SINE Alu 129 277 -32 288 0 0 0 chr5 129097469 129097501 -70532649 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 221 179 0 18 chr5 129097501 129097557 -70532593 + (TA)n Simple_repeat Simple_repeat 2 56 0 205 294 12 12 chr5 129097575 129097660 -70532490 + (TA)n Simple_repeat Simple_repeat 2 86 0 369 0 0 0 chr5 129097660 129097701 -70532449 + (CA)n Simple_repeat Simple_repeat 2 42 0 253 255 59 52 chr5 129097921 129098074 -70532076 + L1MD3 LINE L1 7837 7990 -5 1502 139 0 14 chr5 129099574 129099797 -70530353 - AluSg/x SINE Alu -21 291 72 21 0 0 0 chr5 129100305 129100326 -70529824 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 129100386 129100411 -70529739 + AT_rich Low_complexity Low_complexity 1 25 0 313 200 0 0 chr5 129101146 129101201 -70528949 - AluJ/FLAM SINE Alu -241 61 7 * 11126 153 18 12 chr5 129101199 129101336 -70528814 + Tigger1 DNA MER2_type 459 594 -1824 2034 145 0 13 chr5 129101336 129101639 -70528511 + AluSx SINE Alu 1 299 -13 11126 153 18 12 chr5 129101639 129103446 -70526704 + Tigger1 DNA MER2_type 594 2414 -4 439 324 116 0 chr5 129103755 129103962 -70526188 + HERVL LTR ERVL 3047 3277 -2377 382 349 51 0 chr5 129104393 129104568 -70525582 + HERVL LTR ERVL 4170 4353 -1411 1912 137 63 26 chr5 129104880 129105230 -70524920 + THE1B LTR MaLR 2 364 0 11707 91 5 0 chr5 129105230 129106802 -70523348 + THE1B-int LTR MaLR 1 1580 0 2182 116 51 25 chr5 129106802 129107157 -70522993 + THE1B LTR MaLR 1 364 0 2226 111 0 13 chr5 129107181 129107496 -70522654 + AluY SINE Alu 1 311 0 22 56 0 0 chr5 129107568 129107604 -70522546 + AT_rich Low_complexity Low_complexity 1 36 0 652 275 86 52 chr5 129108766 129109152 -70520998 - MLT1G1 LTR MaLR -196 399 1 22 35 0 0 chr5 129109261 129109290 -70520860 + AT_rich Low_complexity Low_complexity 1 29 0 1849 160 14 0 chr5 129110449 129110737 -70519413 - AluSx SINE Alu -20 292 1 360 173 82 0 chr5 129110738 129110848 -70519302 + MER53 DNA DNA 42 160 -29 24 0 0 0 chr5 129110853 129110877 -70519273 + AT_rich Low_complexity Low_complexity 1 24 0 295 161 0 48 chr5 129110879 129110941 -70519209 - MER53 DNA DNA -130 59 1 1330 192 95 20 chr5 129111463 129111930 -70518220 - MLT2C2 LTR ERVL -32 432 1 183 237 0 0 chr5 129112357 129112395 -70517755 + MIR3 SINE MIR 150 187 -21 1700 185 0 23 chr5 129112405 129112707 -70517443 + AluJo SINE Alu 1 295 -17 23 0 0 0 chr5 129112708 129112731 -70517419 + AT_rich Low_complexity Low_complexity 1 23 0 379 228 98 8 chr5 129113244 129113367 -70516783 - MER45B DNA AcHobo -76 964 831 224 200 18 0 chr5 129114110 129114165 -70515985 + GA-rich Low_complexity Low_complexity 2 57 0 279 83 0 0 chr5 129114299 129114335 -70515815 + AluJ/FLAM SINE Alu 45 80 -222 1398 157 46 4 chr5 129114358 129114619 -70515531 + AluJo SINE Alu 1 272 -40 347 259 97 127 chr5 129114845 129115390 -70514760 + L1M2 LINE L1 440 1229 -5620 260 278 108 23 chr5 129116584 129116843 -70513307 + L1ME LINE L1 3180 3460 -2686 318 281 54 48 chr5 129117042 129117209 -70512941 + L1ME LINE L1 3742 3909 -2237 423 309 154 19 chr5 129117555 129118017 -70512133 + L1ME LINE L1 4298 4821 -1325 316 311 23 17 chr5 129118087 129118264 -70511886 + L1ME LINE L1 4938 5115 -1031 310 310 93 21 chr5 129118374 129118647 -70511503 + L1ME LINE L1 5406 5688 -482 801 253 26 10 chr5 129119470 129119664 -70510486 - MIR SINE MIR -21 241 45 983 284 73 78 chr5 129119729 129121105 -70509045 + L1MEc LINE L1 93 1461 -4935 314 290 53 71 chr5 129121112 129121281 -70508869 + L1MEc LINE L1 1446 1611 -4604 24 32 0 0 chr5 129121853 129121884 -70508266 + AT_rich Low_complexity Low_complexity 1 31 0 329 314 62 69 chr5 129122021 129122311 -70507839 - L1ME4a LINE L1 -239 5882 5595 1596 192 14 3 chr5 129122971 129123268 -70506882 + AluJo SINE Alu 1 300 -12 5746 83 32 1 chr5 129124356 129125165 -70504985 + L1PA7 LINE L1 5321 6154 0 235 198 51 57 chr5 129125204 129125381 -70504769 + (TTTAA)n Simple_repeat Simple_repeat 1 176 0 * 296 241 25 25 chr5 129125253 129125415 -70504735 + (TTAA)n Simple_repeat Simple_repeat 3 164 0 399 262 33 25 chr5 129125468 129125541 -70504609 - L1ME LINE L1 -2723 3357 3286 2345 85 10 0 chr5 129125541 129125847 -70504303 - AluSp SINE Alu -3 310 2 399 262 33 25 chr5 129125847 129125997 -70504153 - L1ME LINE L1 -2794 3286 3129 1357 203 3 40 chr5 129126034 129126334 -70503816 + AluJo SINE Alu 3 291 -21 1912 294 84 37 chr5 129126427 129127936 -70502214 - L1ME LINE L1 -4478 1602 20 254 400 35 31 chr5 129127989 129128249 -70501901 - MIR SINE MIR -1 261 1 222 258 30 0 chr5 129129000 129129066 -70501084 + GA-rich Low_complexity Low_complexity 2 69 0 202 333 43 0 chr5 129129437 129129506 -70500644 - L2 LINE L2 -2 3311 3240 23 78 0 0 chr5 129129638 129129689 -70500461 + AT_rich Low_complexity Low_complexity 1 51 0 484 237 42 0 chr5 129130567 129130685 -70499465 + L1MA10 LINE L1 6204 6326 -8 752 224 6 6 chr5 129131611 129131794 -70498356 - L1 LINE L1 -2264 3882 3700 2376 181 2 5 chr5 129131831 129132272 -70497878 + L1MA4A LINE L1 3861 4300 -1846 4530 71 40 17 chr5 129132272 129133373 -70496777 - MER11A LTR ERVK 0 1266 1 5264 176 23 20 chr5 129133373 129134557 -70495593 + L1MA4A LINE L1 4295 5489 -814 1911 122 28 0 chr5 129134557 129134844 -70495306 + AluSp SINE Alu 5 299 -14 5264 176 23 20 chr5 129134844 129135656 -70494494 + L1MA4A LINE L1 5489 6297 -6 2521 222 70 12 chr5 129135676 129136146 -70494004 + L1MB1 LINE L1 5487 6005 -163 1305 92 97 37 chr5 129136146 129136363 -70493787 + MER30 DNA MER1_type 1 230 0 2521 222 70 12 chr5 129136363 129136532 -70493618 + L1MB1 LINE L1 6005 6163 -5 350 311 72 28 chr5 129136677 129137040 -70493110 + L1MC4 LINE L1 4884 5262 -884 2444 259 94 67 chr5 129137099 129137903 -70492247 + L1MC4 LINE L1 5288 6069 -1973 1052 215 112 58 chr5 129137903 129138313 -70491837 - MSTB1 LTR MaLR 0 432 1 2444 259 94 67 chr5 129138313 129140100 -70490050 + L1MC4 LINE L1 6069 8030 -12 33 73 0 0 chr5 129143773 129143841 -70486309 + AT_rich Low_complexity Low_complexity 1 68 0 230 121 0 0 chr5 129145468 129145501 -70484649 - L2 LINE L2 -19 3294 3262 710 167 34 27 chr5 129145583 129145846 -70484304 - L1MD1 LINE L1 0 6242 5908 1951 249 29 22 chr5 129145852 129146438 -70483712 + L1M4 LINE L1 3831 4420 -1726 * 1957 220 84 18 chr5 129146432 129147162 -70482988 + L1M4 LINE L1 5028 5797 -377 22 56 0 0 chr5 129147981 129148017 -70482133 + AT_rich Low_complexity Low_complexity 1 36 0 202 267 0 40 chr5 129149061 129149162 -70480988 + T-rich Low_complexity Low_complexity 5 101 0 321 306 82 34 chr5 129149384 129149595 -70480555 + L1MC1 LINE L1 4799 5019 -1127 202 204 45 0 chr5 129149811 129149855 -70480295 + (TATG)n Simple_repeat Simple_repeat 1 46 0 370 346 124 16 chr5 129149874 129150430 -70479720 + L1MC1 LINE L1 5292 5574 -547 252 298 30 53 chr5 129150711 129150842 -70479308 - MLT1J1 LTR MaLR -69 377 250 254 28 0 28 chr5 129150870 129150906 -70479244 + (TTA)n Simple_repeat Simple_repeat 2 36 0 226 202 36 83 chr5 129151042 129151126 -70479024 - MLT1J LTR MaLR -421 90 11 279 0 0 0 chr5 129152749 129152780 -70477370 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2332 62 0 0 chr5 129152789 129153077 -70477073 - AluY SINE Alu -23 288 1 186 103 0 0 chr5 129154055 129154084 -70476066 + (TC)n Simple_repeat Simple_repeat 1 29 0 306 0 0 0 chr5 129154095 129154129 -70476021 + (CA)n Simple_repeat Simple_repeat 1 34 0 1755 158 11 38 chr5 129154155 129154219 -70475931 + L1MC1 LINE L1 5990 6054 -279 13206 163 11 33 chr5 129154219 129156691 -70473459 - Tigger1 DNA MER2_type 0 2418 1 1755 158 11 38 chr5 129156691 129156973 -70473177 + L1MC1 LINE L1 6054 6327 -6 191 267 0 8 chr5 129157902 129158033 -70472117 + (TG)n Simple_repeat Simple_repeat 1 130 0 440 276 0 32 chr5 129158044 129158229 -70471921 + (TG)n Simple_repeat Simple_repeat 1 179 0 205 346 11 11 chr5 129158218 129158397 -70471753 + (TCTG)n Simple_repeat Simple_repeat 1 179 0 * 369 299 0 24 chr5 129158289 129158456 -70471694 + (CGTG)n Simple_repeat Simple_repeat 4 166 0 238 343 11 6 chr5 129158522 129158700 -70471450 + (TCTG)n Simple_repeat Simple_repeat 1 179 0 * 406 285 10 29 chr5 129158662 129158977 -70471173 + (TG)n Simple_repeat Simple_repeat 1 309 0 223 363 0 19 chr5 129158928 129159085 -70471065 + (CGTG)n Simple_repeat Simple_repeat 1 154 0 * 400 277 0 23 chr5 129158998 129159175 -70470975 + (TG)n Simple_repeat Simple_repeat 2 174 0 435 317 0 0 chr5 129159236 129159416 -70470734 + (TG)n Simple_repeat Simple_repeat 1 180 0 210 245 0 0 chr5 129159484 129159533 -70470617 + (TG)n Simple_repeat Simple_repeat 2 50 0 459 252 99 27 chr5 129159647 129159869 -70470281 + MER74B LTR ERVL 65 302 -320 648 262 81 19 chr5 129160354 129160564 -70469586 + L2 LINE L2 2336 2558 -756 1101 209 54 4 chr5 129160566 129160844 -70469306 - MER33 DNA MER1_type -13 311 20 604 278 75 97 chr5 129160870 129161584 -70468566 + L2 LINE L2 2618 3306 -7 525 289 29 0 chr5 129161739 129161912 -70468238 - MER97a DNA MER1_type? -715 179 2 1872 111 32 7 chr5 129162983 129163263 -70466887 - AluSx SINE Alu -23 289 3 21 0 0 0 chr5 129163660 129163681 -70466469 + AT_rich Low_complexity Low_complexity 1 21 0 8674 175 26 19 chr5 129164369 129166859 -70463291 + L1MA4 LINE L1 3623 6132 -168 2333 71 17 0 chr5 129166859 129167155 -70462995 + AluY SINE Alu 1 301 -10 8674 175 26 19 chr5 129167155 129167326 -70462824 + L1MA4 LINE L1 6132 6300 0 5016 130 11 5 chr5 129167326 129168135 -70462015 + L1MA4A LINE L1 5484 6303 0 2779 77 17 96 chr5 129168425 129168906 -70461244 + MLT2A1 LTR ERVL 1 443 -1 296 287 92 107 chr5 129169282 129169554 -70460596 - L2 LINE L2 -44 3269 3002 * 359 324 69 37 chr5 129169543 129169759 -70460391 - L2 LINE L2 -945 2369 2147 22 0 0 0 chr5 129169762 129169784 -70460366 + AT_rich Low_complexity Low_complexity 1 22 0 335 333 136 8 chr5 129169906 129170170 -70459980 + L1ME LINE L1 4550 4847 -1299 441 288 34 29 chr5 129170245 129170450 -70459700 + L1ME LINE L1 5460 5665 -456 201 74 0 0 chr5 129172017 129172044 -70458106 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 1913 166 3 0 chr5 129172459 129172749 -70457401 - AluJo SINE Alu -21 291 1 2359 90 0 0 chr5 129172873 129173174 -70456976 + AluY SINE Alu 1 301 -10 1158 258 52 30 chr5 129173466 129173869 -70456281 - MER110 LTR ERV1 0 491 80 253 200 100 0 chr5 129173872 129173922 -70456228 - MER110 LTR ERV1 -351 140 86 2069 154 3 3 chr5 129173932 129174244 -70455906 - AluSx SINE Alu 0 312 1 427 303 79 12 chr5 129175010 129175175 -70454975 + MIR SINE MIR 19 194 -68 1200 221 62 13 chr5 129175215 129175522 -70454628 + MLT1C LTR MaLR 1 322 -145 2382 74 7 0 chr5 129175607 129175904 -70454246 - AluSg SINE Alu -11 299 1 289 313 20 10 chr5 129178075 129178174 -70451976 + MIR SINE MIR 148 247 -15 267 279 81 0 chr5 129180061 129180172 -70449978 - MIR SINE MIR -65 197 78 2121 122 0 0 chr5 129180184 129180470 -70449680 + AluY SINE Alu 1 286 -25 26 30 0 0 chr5 129180474 129180507 -70449643 + AT_rich Low_complexity Low_complexity 1 33 0 2913 93 3 3 chr5 129180682 129181057 -70449093 - THE1C LTR MaLR 0 375 1 280 242 15 0 chr5 129181552 129181618 -70448532 - MLT1K LTR MaLR 0 588 522 425 313 56 26 chr5 129183202 129183435 -70446715 - MIR SINE MIR 0 262 23 242 175 32 63 chr5 129183844 129183907 -70446243 + MER94 DNA DNA 15 75 -59 232 160 0 80 chr5 129184151 129184201 -70445949 + MER94 DNA DNA 41 86 -48 232 160 0 80 chr5 129184411 129184461 -70445689 + MER94 DNA DNA 41 86 -48 232 160 0 80 chr5 129184476 129184526 -70445624 + MER94 DNA DNA 41 86 -48 246 246 0 58 chr5 129184671 129184740 -70445410 + MER94 DNA DNA 41 105 -29 2609 39 0 0 chr5 129185065 129185376 -70444774 - AluY SINE Alu 0 311 1 2582 36 10 0 chr5 129186477 129186785 -70443365 - AluYa5 SINE Alu 0 311 1 330 280 0 13 chr5 129187601 129187676 -70442474 - L2 LINE L2 -2 3311 3238 195 246 180 0 chr5 129187988 129188049 -70442101 - L2 LINE L2 -43 3229 3158 325 349 54 0 chr5 129188063 129188192 -70441958 - L2 LINE L2 0 3272 3137 405 330 39 15 chr5 129189103 129189309 -70440841 + L2 LINE L2 2931 3141 -172 2309 97 7 0 chr5 129189497 129189796 -70440354 + AluSc SINE Alu 1 301 -8 1827 176 14 0 chr5 129190249 129190545 -70439605 - AluSx SINE Alu -12 300 1 201 208 0 62 chr5 129190874 129190922 -70439228 - MIR SINE MIR -148 114 70 588 121 0 0 chr5 129190986 129191077 -70439073 + (GGGA)n Simple_repeat Simple_repeat 4 94 0 270 264 75 38 chr5 129291862 129291968 -70338182 + MIR3 SINE MIR 79 188 -20 1830 184 9 14 chr5 129293199 129293546 -70336604 + MLT1A1 LTR MaLR 21 365 0 424 291 90 0 chr5 129294007 129294141 -70336009 - MIR SINE MIR -71 191 46 1192 137 16 0 chr5 129294332 129294514 -70335636 - AluSg/x SINE Alu -6 306 122 1832 155 4 7 chr5 129294715 129294992 -70335158 - AluJo SINE Alu -31 281 6 664 234 32 6 chr5 129295260 129295418 -70334732 - MIR SINE MIR -61 201 40 25 0 0 0 chr5 129295419 129295444 -70334706 + AT_rich Low_complexity Low_complexity 1 25 0 1764 143 29 32 chr5 129295449 129295757 -70334393 + AluJb SINE Alu 1 307 -5 334 318 74 85 chr5 129296167 129296450 -70333700 + L2 LINE L2 2966 3245 -27 264 315 161 0 chr5 129296448 129296597 -70333553 - MIR3 SINE MIR -3 205 33 * 787 207 49 0 chr5 129296645 129296809 -70333341 - MER5B DNA MER1_type -6 172 1 2639 162 27 24 chr5 129298126 129298733 -70331417 + L1M4 LINE L1 5129 5746 -432 * 10783 117 25 8 chr5 129298728 129300456 -70329694 + L1PA8 LINE L1 2808 4565 -1581 879 73 0 0 chr5 129300456 129300565 -70329585 - THE1A LTR MaLR 0 355 247 362 65 0 0 chr5 129300594 129300640 -70329510 - THE1A LTR MaLR -309 46 1 12438 95 11 1 chr5 129300640 129302203 -70327947 - THE1A-int LTR MaLR 0 1580 1 2803 98 0 6 chr5 129302203 129302560 -70327590 - THE1A LTR MaLR 0 355 1 6422 96 26 14 chr5 129302560 129303667 -70326483 + L1PA8 LINE L1 4561 5703 -469 1968 138 3 3 chr5 129303667 129303964 -70326186 + AluSx SINE Alu 1 297 -15 6422 96 26 14 chr5 129303964 129304431 -70325719 + L1PA8 LINE L1 5703 6163 -9 1629 218 48 54 chr5 129304569 129305032 -70325118 + MLT1C LTR MaLR 8 467 0 16183 51 0 3 chr5 129305110 129307831 -70322319 + L1PA5 LINE L1 3458 6154 0 1604 192 0 21 chr5 129307928 129308215 -70321935 + AluJo SINE Alu 1 281 -31 1529 179 41 6 chr5 129308225 129308589 -70321561 + MER114 LTR ERV 15 391 -257 5472 229 91 29 chr5 129308592 129308641 -70321509 + L1MB3 LINE L1 5 50 -6594 417 35 18 0 chr5 129308641 129308698 -70321452 + L1PA3 LINE L1 6098 6155 0 5472 229 91 29 chr5 129308698 129309063 -70321087 + L1MB3 LINE L1 50 391 -6253 2255 146 22 11 chr5 129309063 129309425 -70320725 + MER47A DNA MER2_type 1 366 0 5472 229 91 29 chr5 129309425 129309644 -70320506 + L1MB3 LINE L1 391 595 -6049 2843 13 0 0 chr5 129309644 129309952 -70320198 + AluYa5 SINE Alu 1 308 -3 5472 229 91 29 chr5 129309952 129311430 -70318720 + L1MB3 LINE L1 595 1981 -4663 2451 120 22 33 chr5 129311430 129311798 -70318352 - THE1B LTR MaLR 0 364 1 1776 73 0 35 chr5 129311799 129312031 -70318119 + AluY SINE Alu 72 295 -16 5472 229 91 29 chr5 129312031 129312640 -70317510 + L1MB3 LINE L1 1981 2551 -4093 1955 164 38 26 chr5 129312640 129312982 -70317168 - MER7A DNA MER2_type 0 346 3 5472 229 91 29 chr5 129312982 129313429 -70316721 + L1MB3 LINE L1 2551 3393 -3251 615 213 92 37 chr5 129313429 129313593 -70316557 - MLT1A1 LTR MaLR 0 365 193 290 228 13 51 chr5 129313605 129313684 -70316466 - MLT1A1-int LTR MaLR -355 1016 941 2840 204 39 16 chr5 129313838 129314401 -70315749 - MLT1A1-int LTR MaLR -959 776 201 589 195 9 0 chr5 129314846 129314959 -70315191 + MER70B LTR ERVL 454 567 -11 843 174 190 5 chr5 129314974 129315169 -70314981 - MLT1A1-int LTR MaLR -1135 236 6 926 208 32 32 chr5 129315174 129315390 -70314760 - MLT1A1 LTR MaLR 0 365 150 4427 190 40 26 chr5 129315415 129316151 -70313999 + L1MA9 LINE L1 4851 5620 -692 1752 112 0 0 chr5 129316151 129316375 -70313775 + AluSx SINE Alu 44 267 -45 4427 190 40 26 chr5 129316375 129317040 -70313110 + L1MA9 LINE L1 5620 6274 -38 426 173 0 0 chr5 129317084 129317165 -70312985 + L1MB3 LINE L1 3823 3903 -2741 272 171 0 0 chr5 129317234 129317275 -70312875 - FAM SINE Alu -12 167 127 1157 175 10 10 chr5 129317275 129317475 -70312675 - AluJo SINE Alu -92 220 21 5217 149 35 30 chr5 129317475 129317863 -70312287 + L1MB3 LINE L1 5610 5995 -686 2014 137 3 22 chr5 129317863 129318178 -70311972 + AluSx SINE Alu 2 310 -2 5217 149 35 30 chr5 129318178 129318853 -70311297 + L1MB3 LINE L1 5995 6681 0 3473 142 30 17 chr5 129318853 129319425 -70310725 + L1MB3 LINE L1 6091 6674 -7 2785 295 53 30 chr5 129319469 129320522 -70309628 - HERV16 LTR ERVL -3773 1223 147 343 293 138 12 chr5 129320646 129320813 -70309337 - LTR16A LTR ERVL -5 445 258 2056 140 162 8 chr5 129320839 129321210 -70308940 + MSTA LTR MaLR 1 428 0 6859 170 27 9 chr5 129321210 129322372 -70307778 + MSTA-int LTR MaLR 1 1183 -468 703 197 148 0 chr5 129322384 129322526 -70307624 + MSTA LTR MaLR 266 428 0 662 313 40 4 chr5 129322532 129322759 -70307391 - LTR16A LTR ERVL -214 236 2 29 0 0 0 chr5 129322765 129322794 -70307356 + AT_rich Low_complexity Low_complexity 1 29 0 2249 69 45 7 chr5 129324041 129324329 -70305821 + AluY SINE Alu 1 299 -12 252 0 0 0 chr5 129324329 129324357 -70305793 + (TA)n Simple_repeat Simple_repeat 2 29 0 192 97 0 0 chr5 129324460 129324491 -70305659 + (TC)n Simple_repeat Simple_repeat 2 32 0 464 348 61 37 chr5 129325322 129325618 -70304532 + L1MDa LINE L1 34 336 -6204 1990 112 0 4 chr5 129325926 129326186 -70303964 + AluSx SINE Alu 16 274 -38 2529 46 0 13 chr5 129326344 129326647 -70303503 - AluY SINE Alu -12 299 1 1065 151 44 15 chr5 129326812 129327018 -70303132 + MER47A DNA MER2_type 1 212 -154 1510 129 16 8 chr5 129327048 129327303 -70302847 + Tigger5 DNA MER2_type 2066 2322 -1 298 302 41 6 chr5 129327693 129327862 -70302288 - L1MEd LINE L1 -3761 2368 2194 2118 124 3 0 chr5 129328318 129328608 -70301542 - AluSx SINE Alu -21 291 1 7991 9 0 0 chr5 129328625 129329706 -70300444 - L1PA2 LINE L1 0 6155 5075 3331 39 3 3 chr5 129329706 129330155 -70299995 + L1P LINE L1 4243 4694 -1452 679 262 136 20 chr5 129330298 129330858 -70299292 - L1MEd LINE L1 -4734 1576 907 1745 174 0 7 chr5 129330863 129331144 -70299006 + AluJb SINE Alu 1 279 -33 2707 145 14 0 chr5 129331288 129331708 -70298442 - MSTB LTR MaLR 0 426 1 266 311 38 19 chr5 129331812 129331918 -70298232 - L1MEd LINE L1 -5514 605 498 273 317 30 10 chr5 129332427 129332528 -70297622 - MIR3 SINE MIR -39 169 67 293 267 147 0 chr5 129334009 129334125 -70296025 + MER94 DNA DNA 2 134 0 293 229 44 91 chr5 129334317 129334437 -70295713 - MER5A DNA MER1_type 0 178 74 200 289 0 0 chr5 129334418 129334470 -70295680 - L2 LINE L2 -336 2977 2926 * 1115 214 66 13 chr5 129334732 129335050 -70295100 + L1MCa LINE L1 168 502 -6062 * 1138 201 124 63 chr5 129335049 129335492 -70294658 + L1MCa LINE L1 392 861 -5184 * 1682 163 4 14 chr5 129335492 129335769 -70294381 - AluJo SINE Alu -38 274 1 1996 162 120 18 chr5 129335769 129336296 -70293854 + L1MCa LINE L1 2069 2657 -3907 1942 173 0 6 chr5 129338122 129338434 -70291716 - AluJb SINE Alu -2 310 1 2832 181 20 18 chr5 129339083 129339691 -70290459 - L1MA8 LINE L1 -30 6261 5653 5407 165 44 23 chr5 129339695 129340256 -70289894 - L1M1 LINE L1 -4259 1069 672 249 57 0 0 chr5 129340256 129340291 -70289859 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 5407 165 44 23 chr5 129340291 129340974 -70289176 - L1M1 LINE L1 -4656 672 5 2463 144 29 28 chr5 129340980 129341783 -70288367 - L1MA8 LINE L1 -626 5665 4862 338 113 42 42 chr5 129341783 129341854 -70288296 + HERV16 LTR ERVL 1153 1223 -3773 2085 151 21 24 chr5 129341891 129342316 -70287834 - L1MB3 LINE L1 -2 6181 5758 975 159 1 6 chr5 129342344 129342535 -70287615 - L1P2 LINE L1 -371 5783 5594 41819 41 2 1 chr5 129342571 129348574 -70281576 + L1PA4 LINE L1 1 6013 -142 1996 127 51 65 chr5 129349622 129349765 -70280385 - MLT1A1 LTR MaLR 0 365 222 2357 93 0 0 chr5 129349765 129350066 -70280084 - AluSq SINE Alu -12 301 1 1996 127 51 65 chr5 129350066 129350292 -70279858 - MLT1A1 LTR MaLR -143 222 1 1659 145 41 66 chr5 129350415 129350733 -70279417 - AluJb SINE Alu -2 310 1 2274 103 26 0 chr5 129350760 129351062 -70279088 - AluSx SINE Alu -2 310 1 2281 106 10 0 chr5 129351082 129351385 -70278765 - AluSc SINE Alu -3 306 1 575 278 17 28 chr5 129351904 129352080 -70278070 + MER5B DNA MER1_type 3 176 -2 1894 127 26 16 chr5 129352567 129352874 -70277276 + AluJb SINE Alu 1 310 -2 650 255 126 34 chr5 129353037 129353200 -70276950 + Charlie2 DNA MER1_type 48 245 -2617 1771 182 0 23 chr5 129353200 129353508 -70276642 + AluJo SINE Alu 1 301 -11 650 255 126 34 chr5 129353508 129353607 -70276543 + Charlie2 DNA MER1_type 245 334 -2528 2470 61 0 3 chr5 129353660 129353956 -70276194 - AluY SINE Alu -16 295 1 282 230 156 15 chr5 129354045 129354180 -70275970 + Charlie2a DNA MER1_type 1482 1635 -1227 361 158 13 0 chr5 129354222 129354298 -70275852 + Charlie2a DNA MER1_type 2717 2793 -69 723 235 7 7 chr5 129354689 129354842 -70275308 + FRAM SINE Alu 2 154 -22 1540 149 94 22 chr5 129355109 129355385 -70274765 - AluJo SINE Alu -16 296 1 22 70 0 0 chr5 129355420 129355463 -70274687 + AT_rich Low_complexity Low_complexity 1 43 0 1718 159 7 36 chr5 129355583 129355891 -70274259 + AluJb SINE Alu 11 309 -3 2250 88 0 0 chr5 129356052 129356369 -70273781 + AluSx SINE Alu 1 317 0 2151 138 46 46 chr5 129356369 129356803 -70273347 - Tigger2a DNA MER2_type 0 434 1 216 0 0 0 chr5 129356938 129356962 -70273188 + (A)n Simple_repeat Simple_repeat 1 24 0 1658 138 6 102 chr5 129356964 129357298 -70272852 + AluJb SINE Alu 1 302 -10 23 0 0 0 chr5 129357902 129357925 -70272225 + AT_rich Low_complexity Low_complexity 1 23 0 1489 179 41 0 chr5 129358073 129358341 -70271809 - AluJb SINE Alu -33 279 1 706 186 8 0 chr5 129358345 129358463 -70271687 - FLAM_A SINE Alu -14 128 10 258 167 0 0 chr5 129358499 129358559 -70271591 - L1ME4a LINE L1 -1 6120 6061 1480 201 11 11 chr5 129358574 129358848 -70271302 + AluJo SINE Alu 1 274 -38 343 266 53 18 chr5 129358995 129359108 -70271042 - L1ME LINE L1 -328 5793 5677 890 111 0 0 chr5 129359117 129359252 -70270898 + L1MB7 LINE L1 5774 5908 -276 2311 184 63 33 chr5 129359252 129359554 -70270596 + L1MB7 LINE L1 5528 5819 -365 2254 107 3 0 chr5 129359554 129359853 -70270297 + AluSp SINE Alu 1 300 -13 2311 184 63 33 chr5 129359853 129360120 -70270030 + L1MB7 LINE L1 5819 6076 -108 2385 81 3 0 chr5 129360120 129360417 -70269733 + AluSp SINE Alu 1 298 -15 2296 78 0 3 chr5 129360418 129360702 -70269448 + AluY SINE Alu 1 283 -28 2311 184 63 33 chr5 129360702 129360760 -70269390 + L1MB7 LINE L1 6075 6177 -7 384 310 176 19 chr5 129361402 129361618 -70268532 - MIR SINE MIR -10 252 3 1651 174 24 14 chr5 129363271 129363559 -70266591 - AluJb SINE Alu -21 291 1 2059 146 7 0 chr5 129364264 129364558 -70265592 + AluSx SINE Alu 3 298 -14 376 120 53 0 chr5 129364558 129364633 -70265517 + G-rich Low_complexity Low_complexity 2 80 0 235 226 0 32 chr5 129364635 129364697 -70265453 + MER116 DNA Mariner 17 76 -4 752 186 153 6 chr5 129364700 129364883 -70265267 + MER63A DNA MER1_type 1 210 0 1414 167 53 18 chr5 129365055 129365336 -70264814 + AluSx SINE Alu 1 291 -21 786 315 175 5 chr5 129365388 129365855 -70264295 - L2 LINE L2 -20 3293 2746 2166 113 0 39 chr5 129366300 129366609 -70263541 + AluSx SINE Alu 2 298 -14 1610 157 30 40 chr5 129366875 129367174 -70262976 - AluJb SINE Alu -16 296 1 198 0 0 0 chr5 129367655 129367677 -70262473 + (GAAAA)n Simple_repeat Simple_repeat 4 25 0 2136 119 10 0 chr5 129367740 129368035 -70262115 + AluSx SINE Alu 1 298 -14 353 250 50 0 chr5 129368429 129368509 -70261641 - L2 LINE L2 -2 3311 3228 3399 262 113 84 chr5 129368527 129369264 -70260886 - L2 LINE L2 -379 2935 2220 1768 151 35 3 chr5 129369264 129369549 -70260601 + AluJb SINE Alu 1 294 -18 2327 61 17 10 chr5 129369550 129369845 -70260305 - AluY SINE Alu -14 297 1 3399 262 113 84 chr5 129369845 129369878 -70260272 - L2 LINE L2 -1094 2220 2189 2321 97 0 13 chr5 129369878 129370186 -70259964 + AluSx SINE Alu 1 304 -8 3399 262 113 84 chr5 129370186 129371013 -70259137 - L2 LINE L2 -1125 2189 1387 2120 111 0 34 chr5 129371013 129371310 -70258840 + AluSx SINE Alu 1 287 -25 216 0 0 0 chr5 129371313 129371337 -70258813 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3399 262 113 84 chr5 129371337 129371695 -70258455 - L2 LINE L2 -1928 1386 916 1032 116 39 53 chr5 129371704 129371911 -70258239 + MER2 DNA MER2_type 1 204 -141 2409 81 0 3 chr5 129372934 129373241 -70256909 - AluY SINE Alu -5 306 1 2113 133 7 0 chr5 129373246 129373555 -70256595 - AluSx SINE Alu -1 311 1 2212 103 17 0 chr5 129373557 129373847 -70256303 - AluSx SINE Alu -17 295 1 2197 95 20 0 chr5 129374286 129374580 -70255570 + AluSc SINE Alu 2 301 -8 2277 108 3 0 chr5 129374585 129374882 -70255268 + AluSp SINE Alu 3 300 -13 2324 116 3 0 chr5 129374971 129375282 -70254868 + AluSx SINE Alu 1 312 0 21 36 0 0 chr5 129375626 129375654 -70254496 + AT_rich Low_complexity Low_complexity 1 28 0 2427 67 0 13 chr5 129375977 129376277 -70253873 + AluSc SINE Alu 1 296 -13 189 0 0 0 chr5 129376356 129376377 -70253773 + (A)n Simple_repeat Simple_repeat 1 21 0 1854 124 11 4 chr5 129376608 129376882 -70253268 + AluSx SINE Alu 35 310 -2 223 188 0 42 chr5 129377790 129377838 -70252312 + L2 LINE L2 3265 3310 -3 302 115 0 19 chr5 129378307 129378359 -70251791 - L2 LINE L2 0 3313 3263 26 30 0 0 chr5 129379395 129379428 -70250722 + GC_rich Low_complexity Low_complexity 1 33 0 561 213 44 7 chr5 129380040 129380176 -70249974 + L2 LINE L2 2394 2534 -780 931 150 105 30 chr5 129380176 129380376 -70249774 + AluJo SINE Alu 82 296 -16 349 176 85 125 chr5 129380380 129380454 -70249696 + L2 LINE L2 3095 3170 -143 1286 180 184 17 chr5 129380454 129380748 -70249402 - MER2 DNA MER2_type -1 343 1 349 176 85 125 chr5 129380748 129380849 -70249301 + L2 LINE L2 3170 3263 -50 22 0 0 0 chr5 129380907 129380929 -70249221 + AT_rich Low_complexity Low_complexity 1 22 0 1755 161 10 30 chr5 129381456 129381761 -70248389 - AluJb SINE Alu -13 299 1 21 71 0 0 chr5 129381896 129381938 -70248212 + AT_rich Low_complexity Low_complexity 1 42 0 2241 118 0 0 chr5 129382375 129382680 -70247470 - AluSq SINE Alu -8 305 1 2306 98 0 7 chr5 129382686 129382991 -70247159 - AluSx SINE Alu -9 303 1 412 289 81 43 chr5 129383049 129383284 -70246866 + MIR SINE MIR 18 261 -1 300 277 134 8 chr5 129383566 129383685 -70246465 - MER94 DNA DNA 0 134 1 252 309 0 0 chr5 129384389 129384444 -70245706 - L2 LINE L2 -13 3259 3205 335 219 0 0 chr5 129384626 129384690 -70245460 - MER113 DNA MER1_type? 0 521 458 460 218 54 20 chr5 129384924 129385071 -70245079 - MER113 DNA MER1_type? -309 212 61 2114 127 3 3 chr5 129385554 129385853 -70244297 + AluSx SINE Alu 1 299 -13 923 121 0 0 chr5 129385935 129386059 -70244091 + AluSq/x SINE Alu 1 124 -189 22 0 0 0 chr5 129386059 129386081 -70244069 + AT_rich Low_complexity Low_complexity 1 22 0 2447 191 85 31 chr5 129386360 129386914 -70243236 + MLT1E2 LTR MaLR 36 619 -7 424 267 106 50 chr5 129387278 129387527 -70242623 + MIR SINE MIR 3 262 0 2230 94 10 0 chr5 129387561 129387849 -70242301 - AluSg SINE Alu -19 291 1 1336 154 147 0 chr5 129387901 129388180 -70241970 - MER33 DNA MER1_type 0 324 5 2197 128 0 0 chr5 129388760 129389072 -70241078 - AluSx SINE Alu 0 312 1 1455 56 0 17 chr5 129389118 129389297 -70240853 + L1PA6 LINE L1 5979 6154 0 2361 104 0 7 chr5 129389540 129389849 -70240301 - AluSp SINE Alu -6 307 1 2312 85 3 10 chr5 129390655 129390960 -70239190 - AluSx SINE Alu -9 303 1 468 0 0 0 chr5 129391220 129391272 -70238878 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 1841 173 6 10 chr5 129391288 129391600 -70238550 - AluJb SINE Alu -1 311 1 21 89 0 0 chr5 129392219 129392275 -70237875 + AT_rich Low_complexity Low_complexity 1 56 0 656 178 92 61 chr5 129392275 129392438 -70237712 - L1MC2 LINE L1 -7 6337 6170 786 156 16 23 chr5 129392444 129392572 -70237578 - FLAM_C SINE Alu -15 128 2 1806 117 58 67 chr5 129392585 129392928 -70237222 - L1MC2 LINE L1 -184 6160 5821 771 267 48 91 chr5 129392998 129393436 -70236714 - L1ME3A LINE L1 -318 5851 5430 1150 152 0 0 chr5 129393439 129393604 -70236546 - FRAM SINE Alu -20 156 1 1800 261 109 78 chr5 129393689 129394014 -70236136 - L1ME3A LINE L1 -1107 5039 4726 2219 125 0 0 chr5 129394014 129394317 -70235833 + AluSx SINE Alu 1 303 -9 1800 261 109 78 chr5 129394317 129394896 -70235254 - L1ME3A LINE L1 -1420 4726 4167 2293 114 3 0 chr5 129394896 129395203 -70234947 + AluSg SINE Alu 2 309 -1 1800 261 109 78 chr5 129395203 129395391 -70234759 - L1ME3A LINE L1 -1979 4167 3986 1434 185 27 27 chr5 129395391 129395688 -70234462 + AluJo SINE Alu 1 297 -15 1800 261 109 78 chr5 129395688 129395701 -70234449 - L1ME3A LINE L1 -2160 3986 3975 2086 122 0 7 chr5 129395701 129395995 -70234155 - AluSg SINE Alu -18 292 1 1800 261 109 78 chr5 129395995 129396160 -70233990 - L1ME3A LINE L1 -2171 3975 3726 788 272 120 61 chr5 129396200 129396290 -70233860 + HAL1b LINE L1 5 88 -2368 1975 121 68 0 chr5 129396290 129396570 -70233580 + AluSp SINE Alu 3 301 -12 788 272 120 61 chr5 129396570 129396847 -70233303 + HAL1b LINE L1 88 347 -2109 2214 132 6 0 chr5 129396847 129397158 -70232992 - AluSq SINE Alu 0 313 1 788 272 120 61 chr5 129397158 129397420 -70232730 + HAL1b LINE L1 347 1754 -702 314 215 0 31 chr5 129397638 129397703 -70232447 - MER5B DNA MER1_type -114 64 2 2117 132 0 0 chr5 129398608 129398903 -70231247 - AluSx SINE Alu -17 295 1 1163 270 30 20 chr5 129398908 129399349 -70230801 - L1ME3A LINE L1 -3436 2710 2266 798 172 112 59 chr5 129399658 129399728 -70230422 - MER45A DNA AcHobo -1403 178 113 2379 65 0 23 chr5 129399728 129400034 -70230116 - AluY SINE Alu -12 299 1 798 172 112 59 chr5 129400034 129400132 -70230018 - MER45A DNA AcHobo -1468 113 1 22 0 0 0 chr5 129400739 129400761 -70229389 + AT_rich Low_complexity Low_complexity 1 22 0 305 331 155 11 chr5 129401308 129401586 -70228564 - L2 LINE L2 0 3313 2996 2407 51 54 0 chr5 129402071 129402365 -70227785 + AluY SINE Alu 2 311 0 530 318 71 68 chr5 129403138 129403873 -70226277 + L1MC4a LINE L1 63 799 -5320 991 184 0 0 chr5 129403877 129404040 -70226110 - AluJb SINE Alu -12 300 138 39 50 0 0 chr5 129404076 129404136 -70226014 + AT_rich Low_complexity Low_complexity 1 60 0 2195 91 0 14 chr5 129404142 129404439 -70225711 - AluSg SINE Alu 0 310 18 382 229 56 133 chr5 129404542 129404699 -70225451 + L1MC4a LINE L1 897 1065 -5054 1231 79 11 63 chr5 129404699 129404812 -70225338 - L1PA8 LINE L1 -1 6171 6070 2306 72 3 20 chr5 129404812 129405116 -70225034 - AluY SINE Alu -12 299 1 1231 79 11 63 chr5 129405116 129405192 -70224958 - L1PA8 LINE L1 -102 6070 5992 382 229 56 133 chr5 129405192 129405409 -70224741 + L1MC4a LINE L1 1065 1242 -4877 1677 149 6 56 chr5 129405446 129405768 -70224382 + AluJo SINE Alu 7 312 0 333 257 92 22 chr5 129405908 129406144 -70224006 + L1MC4a LINE L1 1364 1556 -4573 366 279 56 92 chr5 129406261 129406608 -70223542 + L1MC4a LINE L1 4575 4888 -1241 1998 129 14 3 chr5 129406608 129406894 -70223256 + AluSx SINE Alu 1 289 -23 366 279 56 92 chr5 129406894 129407212 -70222938 + L1MC4a LINE L1 4888 5216 -913 301 225 0 101 chr5 129407233 129407362 -70222788 + L1MC4a LINE L1 5279 5394 -2397 1196 180 36 94 chr5 129407362 129407438 -70222712 + MLT2B2 LTR ERVL 1 80 -435 2238 112 0 3 chr5 129407438 129407742 -70222408 + AluSg SINE Alu 1 303 -7 2454 85 0 0 chr5 129407744 129408039 -70222111 + AluSc SINE Alu 1 295 -14 1196 180 36 94 chr5 129408039 129408143 -70222007 + MLT2B2 LTR ERVL 81 189 -326 2202 88 10 7 chr5 129408143 129408440 -70221710 + AluSg SINE Alu 1 298 -12 1196 180 36 94 chr5 129408440 129408668 -70221482 + MLT2B2 LTR ERVL 189 429 -86 2408 94 0 0 chr5 129408668 129408975 -70221175 - AluSg SINE Alu -2 308 2 288 53 0 0 chr5 129408975 129409013 -70221137 + (TCTA)n Simple_repeat Simple_repeat 2 39 0 1196 180 36 94 chr5 129409013 129409045 -70221105 + MLT2B2 LTR ERVL 427 507 -8 293 210 100 10 chr5 129409049 129409149 -70221001 + L1MC4a LINE L1 5390 5498 -2293 745 217 42 12 chr5 129409344 129409510 -70220640 - MLT1J1 LTR MaLR -114 332 162 601 251 48 44 chr5 129409526 129409666 -70220484 + L1MC4a LINE L1 5551 5694 -2097 1990 114 21 7 chr5 129409666 129409956 -70220194 + AluSx SINE Alu 1 294 -18 601 251 48 44 chr5 129409956 129410042 -70220108 + L1MC4a LINE L1 5694 5778 -2013 28 79 0 0 chr5 129410044 129410107 -70220043 + AT_rich Low_complexity Low_complexity 1 63 0 406 265 66 29 chr5 129410113 129410249 -70219901 + L1MC4a LINE L1 5817 5957 -1834 238 222 74 0 chr5 129410313 129410367 -70219783 + L1MC4a LINE L1 6045 6102 -1689 29 0 0 0 chr5 129410421 129410450 -70219700 + AT_rich Low_complexity Low_complexity 1 29 0 2311 107 0 3 chr5 129410571 129410879 -70219271 - AluSq SINE Alu -4 309 3 1910 147 0 7 chr5 129410917 129411216 -70218934 + AluJb SINE Alu 1 297 -15 2296 108 7 0 chr5 129411246 129411552 -70218598 + AluSx SINE Alu 5 312 0 23 0 0 0 chr5 129411934 129411957 -70218193 + AT_rich Low_complexity Low_complexity 1 23 0 358 263 27 124 chr5 129412161 129412533 -70217617 + L1M4 LINE L1 3595 3930 -2216 227 309 119 24 chr5 129412645 129412771 -70217379 + LTR33 LTR ERVL 44 181 -340 288 265 39 0 chr5 129412862 129412964 -70217186 + LTR33A LTR ERVL 395 500 -23 385 298 61 30 chr5 129412988 129413186 -70216964 + L1M4 LINE L1 4003 4206 -1940 1993 159 0 0 chr5 129413379 129413680 -70216470 - AluJb SINE Alu -11 301 1 685 207 0 9 chr5 129413778 129413894 -70216256 + FLAM_A SINE Alu 1 115 -18 207 69 0 0 chr5 129413900 129413929 -70216221 + (TAA)n Simple_repeat Simple_repeat 2 30 0 829 164 0 8 chr5 129414017 129414139 -70216011 + FLAM_C SINE Alu 1 121 -12 213 39 0 0 chr5 129414139 129414165 -70215985 + (CA)n Simple_repeat Simple_repeat 2 27 0 1371 203 62 60 chr5 129414316 129414685 -70215465 - MLT1A2 LTR MaLR 0 374 5 1899 145 0 36 chr5 129414955 129415114 -70215036 - AluJb SINE Alu -20 292 148 1974 125 0 61 chr5 129415114 129415426 -70214724 - AluSx SINE Alu -19 293 1 1899 145 0 36 chr5 129415426 129415569 -70214581 - AluJb SINE Alu -164 148 1 23 78 0 0 chr5 129415735 129415786 -70214364 + AT_rich Low_complexity Low_complexity 1 51 0 974 108 8 0 chr5 129415849 129415979 -70214171 - AluSq/x SINE Alu -182 131 1 876 191 12 43 chr5 129416060 129416222 -70213928 - FRAM SINE Alu -25 151 1 2483 275 14 14 chr5 129416445 129417038 -70213112 - ERVL LTR ERVL -3475 2289 1697 1146 276 36 11 chr5 129417266 129417625 -70212525 - ERVL LTR ERVL -4552 1212 845 761 329 24 4 chr5 129417698 129417950 -70212200 - ERVL LTR ERVL -5088 676 420 4147 272 58 11 chr5 129418585 129419817 -70210333 - L2 LINE L2 -525 2789 1500 514 209 123 13 chr5 129420829 129421018 -70209132 - MIR SINE MIR 0 262 11 1828 76 22 0 chr5 129421915 129422140 -70208010 + MER30 DNA MER1_type 1 230 0 2014 131 0 3 chr5 129422165 129422447 -70207703 + AluSx SINE Alu 20 300 -12 2195 87 17 0 chr5 129422827 129423126 -70207024 + AluY SINE Alu 1 304 -7 1689 206 0 0 chr5 129423376 129423677 -70206473 - AluJb SINE Alu -11 301 1 26 30 0 0 chr5 129424128 129424161 -70205989 + AT_rich Low_complexity Low_complexity 1 33 0 498 270 105 30 chr5 129424205 129424405 -70205745 - L1ME3A LINE L1 -36 6134 5920 1239 234 57 30 chr5 129424407 129425128 -70205022 - L1ME3A LINE L1 -8 6162 5287 1988 148 6 6 chr5 129425128 129425439 -70204711 - AluJb SINE Alu -1 311 1 1239 234 57 30 chr5 129425439 129425839 -70204311 - L1ME3A LINE L1 -883 5287 4899 1041 178 4 69 chr5 129426002 129426233 -70203917 - MER58A DNA MER1_type 0 224 9 1911 133 3 20 chr5 129426809 129427102 -70203048 - AluJo SINE Alu -9 303 16 227 135 0 0 chr5 129427102 129427139 -70203011 - AluJo SINE Alu -262 37 1 419 260 65 16 chr5 129428043 129428166 -70201984 - MIR3 SINE MIR -45 163 35 735 254 71 8 chr5 129428413 129428653 -70201497 + LTR16A LTR ERVL 17 271 -179 239 293 24 24 chr5 129428705 129428787 -70201363 + LTR16A LTR ERVL 369 450 0 794 201 61 18 chr5 129428936 129429100 -70201050 - FAM SINE Alu -9 40 1 21 0 0 0 chr5 129429228 129429249 -70200901 + AT_rich Low_complexity Low_complexity 1 21 0 221 289 60 12 chr5 129429322 129429405 -70200745 + L2 LINE L2 3185 3271 -1 1961 167 0 6 chr5 129429581 129429893 -70200257 + AluJb SINE Alu 1 310 -2 394 269 21 60 chr5 129430062 129430130 -70200020 - L1MC4 LINE L1 -928 7114 7045 2208 96 3 14 chr5 129430130 129430423 -70199727 - AluSq SINE Alu -23 290 1 394 269 21 60 chr5 129430423 129430588 -70199562 - L1MC4 LINE L1 -997 7045 6890 363 254 61 18 chr5 129430592 129430706 -70199444 + L1MEd LINE L1 105 223 -5896 2384 97 0 0 chr5 129430928 129431236 -70198914 + AluSx SINE Alu 5 312 0 34 0 0 0 chr5 129431255 129431289 -70198861 + AT_rich Low_complexity Low_complexity 1 34 0 478 171 0 0 chr5 129431289 129431377 -70198773 - AluJ/FRAM SINE Alu -2 310 223 1524 150 4 12 chr5 129431377 129431631 -70198519 - AluJb SINE Alu -59 253 2 265 253 75 101 chr5 129431674 129432157 -70197993 + L1MEd LINE L1 583 1052 -5067 2016 132 7 0 chr5 129432195 129432490 -70197660 + AluSx SINE Alu 1 297 -15 266 292 87 32 chr5 129432623 129432842 -70197308 + HAL1 LINE L1 1413 1643 -864 2401 151 55 0 chr5 129433088 129433492 -70196658 - MSTB LTR MaLR 0 426 1 349 211 32 84 chr5 129433496 129433591 -70196559 - L1ME1 LINE L1 -130 6036 5947 432 194 19 19 chr5 129433797 129433905 -70196245 + LTR43 LTR ERV1 189 296 -306 1512 180 44 58 chr5 129434142 129434509 -70195641 - L1ME1 LINE L1 -223 5943 5581 2166 120 0 58 chr5 129434509 129434835 -70195315 + AluSg SINE Alu 1 307 -3 1512 180 44 58 chr5 129434835 129434900 -70195250 - L1ME1 LINE L1 -585 5581 5517 1363 147 5 0 chr5 129434900 129435098 -70195052 + AluSx SINE Alu 1 199 -113 1079 202 88 8 chr5 129435098 129435538 -70194612 - L1ME1 LINE L1 -668 5498 5021 568 124 21 10 chr5 129435539 129435636 -70194514 + MER4A LTR ERV1 1 98 -566 1105 126 9 11 chr5 129435636 129435906 -70194244 + MER4B LTR ERV1 261 610 0 279 206 41 10 chr5 129435906 129436003 -70194147 - L1ME1 LINE L1 -1123 5023 4924 319 300 62 8 chr5 129436007 129436137 -70194013 - L1ME1 LINE L1 -1447 4699 4563 1628 260 58 37 chr5 129436163 129436328 -70193822 + L2 LINE L2 1859 2019 -1295 658 223 207 47 chr5 129436328 129436521 -70193629 - MER58A DNA MER1_type 0 224 1 1628 260 58 37 chr5 129436521 129436871 -70193279 + L2 LINE L2 2019 2385 -929 2255 189 36 34 chr5 129436886 129437390 -70192760 - MLT2B1 LTR ERVL -2 518 14 970 274 104 11 chr5 129437392 129437947 -70192203 + L1ME LINE L1 5197 5801 -361 34 24 0 0 chr5 129438292 129438333 -70191817 + AT_rich Low_complexity Low_complexity 1 41 0 944 152 67 54 chr5 129438591 129438815 -70191335 - MER46A DNA MER2_type -5 231 5 423 0 0 0 chr5 129438817 129438864 -70191286 + (TG)n Simple_repeat Simple_repeat 2 48 0 310 348 72 0 chr5 129438869 129439050 -70191100 - L1ME LINE L1 -297 5824 5631 558 244 41 0 chr5 129439105 129439228 -70190922 + FLAM_A SINE Alu 1 128 -5 330 307 206 37 chr5 129439251 129439469 -70190681 - L1ME LINE L1 -2256 5552 5298 2324 95 3 0 chr5 129439624 129439920 -70190230 - AluSp SINE Alu -16 297 1 879 224 0 6 chr5 129440656 129440821 -70189329 + FAM SINE Alu 1 164 -11 2031 145 20 0 chr5 129440822 129441119 -70189031 - AluSp SINE Alu -10 303 1 1610 221 3 0 chr5 129441198 129441497 -70188653 + AluJb SINE Alu 1 300 -12 2354 88 3 10 chr5 129441591 129441897 -70188253 - AluSp SINE Alu -9 304 1 2411 88 3 0 chr5 129441989 129442295 -70187855 - AluSg SINE Alu -1 309 3 25 31 0 0 chr5 129442484 129442516 -70187634 + AT_rich Low_complexity Low_complexity 1 32 0 487 261 18 0 chr5 129444221 129444374 -70185776 + MER20 DNA MER1_type 56 214 -5 1811 152 0 26 chr5 129444461 129444763 -70185387 + AluSx SINE Alu 1 294 -18 1465 143 70 162 chr5 129444854 129445435 -70184715 + L1MC4 LINE L1 7527 7995 0 351 0 0 0 chr5 129445446 129445485 -70184665 + (CA)n Simple_repeat Simple_repeat 2 40 0 1970 162 13 10 chr5 129445487 129445790 -70184360 + AluJo SINE Alu 1 304 -8 250 337 70 29 chr5 129446049 129446221 -70183929 - L2 LINE L2 -5 3308 3130 250 242 50 111 chr5 129446271 129446376 -70183774 - MLT1J LTR MaLR -2 577 467 2109 104 35 0 chr5 129446376 129446665 -70183485 + AluSg SINE Alu 1 299 -11 250 242 50 111 chr5 129446665 129446808 -70183342 - MLT1J LTR MaLR -112 467 313 1035 145 0 9 chr5 129447016 129447232 -70182918 + AluSx SINE Alu 2 302 -8 2146 84 0 27 chr5 129448053 129448350 -70181800 - AluSq SINE Alu -24 289 1 246 256 146 30 chr5 129448410 129448574 -70181576 - LTR67 LTR ERVL -15 542 360 232 317 25 50 chr5 129448794 129448955 -70181195 - LTR67 LTR ERVL -399 158 2 2350 84 3 7 chr5 129449307 129449606 -70180544 - AluSp SINE Alu -15 298 1 340 383 5 55 chr5 129449856 129450073 -70180077 + L2 LINE L2 3017 3222 -50 22 35 0 0 chr5 129450649 129450678 -70179472 + AT_rich Low_complexity Low_complexity 1 29 0 5341 126 41 0 chr5 129450766 129451250 -70178900 - L1MA5 LINE L1 -2 6298 5835 447 19 0 0 chr5 129451250 129451302 -70178848 + (TG)n Simple_repeat Simple_repeat 1 52 0 5341 126 41 0 chr5 129451302 129451737 -70178413 - L1MA5 LINE L1 -465 5835 5341 22 0 0 0 chr5 129451744 129451766 -70178384 + AT_rich Low_complexity Low_complexity 1 22 0 270 136 0 0 chr5 129452124 129452168 -70177982 + (TA)n Simple_repeat Simple_repeat 1 44 0 2270 116 0 0 chr5 129452541 129452842 -70177308 + AluSq SINE Alu 1 301 -12 2152 130 0 0 chr5 129452842 129453143 -70177007 + AluSg SINE Alu 5 305 -5 1930 176 0 3 chr5 129453168 129453481 -70176669 - AluSx SINE Alu 0 312 1 1372 253 34 33 chr5 129453540 129453860 -70176290 + L1ME LINE L1 4714 5032 -1130 2491 71 0 3 chr5 129453860 129454171 -70175979 - AluY SINE Alu -1 310 1 2094 135 3 0 chr5 129454171 129454467 -70175683 - AluSx SINE Alu -15 297 1 1372 253 34 33 chr5 129454467 129454901 -70175249 + L1ME LINE L1 5031 5471 -691 189 0 0 0 chr5 129454901 129454922 -70175228 + (T)n Simple_repeat Simple_repeat 1 21 0 433 221 10 0 chr5 129454930 129455034 -70175116 + L1ME3A LINE L1 6054 6158 -12 1820 174 0 0 chr5 129455069 129455357 -70174793 - AluJb SINE Alu -24 288 1 2189 130 0 13 chr5 129455546 129455862 -70174288 + AluSx SINE Alu 1 312 0 22 0 0 0 chr5 129456009 129456031 -70174119 + AT_rich Low_complexity Low_complexity 1 22 0 1796 193 6 9 chr5 129456409 129456735 -70173415 + Tigger7 DNA MER2_type 20 344 -2143 794 153 21 0 chr5 129456730 129456874 -70173276 + Tigger7 DNA MER2_type 2439 2585 -2 * 268 348 67 0 chr5 129457078 129457167 -70172983 + MIR SINE MIR 40 134 -74 309 210 16 0 chr5 129457179 129457241 -70172909 + Charlie1 DNA MER1_type 31 93 -2668 1099 158 55 40 chr5 129457244 129457516 -70172634 + Charlie1 DNA MER1_type 1733 2008 -753 1068 180 0 0 chr5 129457518 129457685 -70172465 - FRAM SINE Alu -9 167 1 757 221 17 0 chr5 129457685 129457857 -70172293 + Charlie1 DNA MER1_type 2003 2177 -584 1554 260 69 35 chr5 129457909 129458485 -70171665 - L2 LINE L2 -338 2976 2381 289 88 0 0 chr5 129458746 129458792 -70171358 + Alu SINE Alu 254 293 -7 838 135 0 23 chr5 129458836 129458969 -70171181 + FLAM_C SINE Alu 12 141 -2 455 113 0 0 chr5 129458991 129459062 -70171088 + Charlie1 DNA MER1_type 2347 2417 -344 2285 101 13 0 chr5 129459065 129459371 -70170779 + AluSq SINE Alu 1 310 -3 844 130 139 25 chr5 129459376 129459614 -70170536 + Charlie1 DNA MER1_type 2497 2761 0 21 57 0 0 chr5 129459679 129459714 -70170436 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr5 129461385 129461420 -70168730 + AT_rich Low_complexity Low_complexity 1 35 0 180 308 0 0 chr5 129461665 129461717 -70168433 + MIR SINE MIR 163 214 -48 537 101 30 0 chr5 129461835 129461934 -70168216 + (TA)n Simple_repeat Simple_repeat 1 102 0 347 228 0 33 chr5 129461936 129462028 -70168122 - L1MC4 LINE L1 -1339 6703 6615 2203 92 51 0 chr5 129462028 129462323 -70167827 - AluSx SINE Alu -2 310 1 333 232 0 40 chr5 129462323 129462340 -70167810 + L1MC4 LINE L1 6690 6706 -1336 610 299 46 5 chr5 129462350 129462547 -70167603 + MIR SINE MIR 14 218 -44 1905 151 9 49 chr5 129463260 129463387 -70166763 + AluJo SINE Alu 1 132 -180 2236 103 0 0 chr5 129463387 129463678 -70166472 - AluSx SINE Alu -21 291 1 1905 151 9 49 chr5 129463678 129463875 -70166275 + AluJo SINE Alu 132 312 0 2306 102 3 7 chr5 129464347 129464651 -70165499 - AluSg SINE Alu -7 303 1 279 304 59 15 chr5 129464795 129464930 -70165220 + L2 LINE L2 2325 2465 -849 305 254 30 0 chr5 129465098 129465165 -70164985 - MIR SINE MIR 0 262 194 1378 254 127 43 chr5 129465165 129466150 -70164000 + HAL1 LINE L1 865 1932 -575 22 35 0 0 chr5 129466198 129466227 -70163923 + AT_rich Low_complexity Low_complexity 1 29 0 1657 180 68 14 chr5 129466396 129466762 -70163388 + L1PB4 LINE L1 5771 6156 0 2098 179 24 15 chr5 129466763 129467232 -70162918 + L1M4 LINE L1 5316 5788 -396 1950 106 11 7 chr5 129467280 129467582 -70162568 + AluSx SINE Alu 9 311 0 1263 149 0 5 chr5 129467582 129467811 -70162339 + AluJb SINE Alu 86 312 0 2181 107 3 29 chr5 129467824 129468134 -70162016 + AluSp SINE Alu 1 302 -11 7139 122 31 43 chr5 129468139 129468479 -70161671 + Tigger1 DNA MER2_type 1102 1445 -973 1775 152 11 0 chr5 129468479 129468755 -70161395 - AluJo SINE Alu -21 291 13 7139 122 31 43 chr5 129468755 129469569 -70160581 + Tigger1 DNA MER2_type 1445 2240 -178 2087 110 7 17 chr5 129469569 129469868 -70160282 - AluSq SINE Alu -17 296 1 7139 122 31 43 chr5 129469868 129470045 -70160105 + Tigger1 DNA MER2_type 2240 2418 0 580 128 0 0 chr5 129470045 129470139 -70160011 + MLT1-int LTR MaLR 39 132 -1239 249 253 193 0 chr5 129470484 129470567 -70159583 + MIR SINE MIR 31 129 -133 214 205 24 84 chr5 129470665 129470748 -70159402 + L2 LINE L2 3191 3268 -4 221 333 73 10 chr5 129470787 129470883 -70159267 + L2 LINE L2 2919 3020 -252 2044 142 3 0 chr5 129470897 129471200 -70158950 - AluSx SINE Alu -8 304 1 183 274 143 36 chr5 129471292 129471376 -70158774 + L2 LINE L2 3173 3265 -48 276 253 18 2 chr5 129472888 129472961 -70157189 - MIR SINE MIR -96 112 39 183 269 15 45 chr5 129473254 129473321 -70156829 + MIR3 SINE MIR 138 202 -6 286 283 96 36 chr5 129473635 129473801 -70156349 - L3 LINE CR1 -289 1288 1113 501 244 175 50 chr5 129473802 129474305 -70155845 - LTR24B LTR ERV1 -7 569 4 1590 184 98 25 chr5 129474385 129474781 -70155369 + MLT1D LTR MaLR 1 425 -80 2052 103 0 71 chr5 129474817 129475157 -70154993 - AluYb8 SINE Alu -2 316 1 1282 148 7 92 chr5 129475160 129475191 -70154959 - MLT1D LTR MaLR -230 275 243 2107 107 21 0 chr5 129475191 129475480 -70154670 - AluSg SINE Alu -15 295 1 1282 148 7 92 chr5 129475480 129475719 -70154431 - MLT1D LTR MaLR -262 243 28 1221 280 148 34 chr5 129475749 129476363 -70153787 - L2 LINE L2 -445 2869 2186 1106 168 41 45 chr5 129476401 129476645 -70153505 - L1MC4 LINE L1 0 8042 7800 528 188 31 0 chr5 129476645 129476741 -70153409 + MER5A DNA MER1_type 1 99 -90 488 187 0 0 chr5 129476768 129476859 -70153291 - L1MC4 LINE L1 -267 7775 7685 2088 115 0 0 chr5 129476950 129477229 -70152921 + AluSx SINE Alu 15 293 -19 260 231 324 29 chr5 129477270 129477508 -70152642 - L2 LINE L2 -1357 1957 1650 842 175 0 7 chr5 129477521 129477664 -70152486 - MER5B DNA MER1_type -36 142 1 25 31 0 0 chr5 129478451 129478483 -70151667 + GC_rich Low_complexity Low_complexity 1 32 0 186 189 0 0 chr5 129478803 129478840 -70151310 + C-rich Low_complexity Low_complexity 3 39 0 249 314 128 36 chr5 129480029 129480197 -70149953 + L2 LINE L2 3006 3210 -103 2305 93 3 0 chr5 129480197 129480487 -70149663 + AluSx SINE Alu 3 293 -19 249 314 128 36 chr5 129480487 129480592 -70149558 + L2 LINE L2 3210 3304 -9 570 180 10 0 chr5 129480894 129480994 -70149156 - L1ME LINE L1 -581 5585 5485 2252 72 21 0 chr5 129480997 129481288 -70148862 - AluY SINE Alu -14 297 1 1487 117 56 28 chr5 129481288 129481537 -70148613 - Tigger2a DNA MER2_type -178 256 1 2280 84 30 0 chr5 129481712 129482010 -70148140 - AluSp SINE Alu -6 307 1 1749 142 58 42 chr5 129482282 129482612 -70147538 - MER47A DNA MER2_type -1 365 31 1743 166 3 14 chr5 129483179 129483474 -70146676 + AluJb SINE Alu 1 292 -20 277 242 55 66 chr5 129484591 129484682 -70145468 - HAL1 LINE L1 -2097 410 321 2174 101 0 16 chr5 129484709 129485017 -70145133 - AluSx SINE Alu -9 303 1 21 0 0 0 chr5 129485092 129485113 -70145037 + AT_rich Low_complexity Low_complexity 1 21 0 2006 124 28 0 chr5 129485145 129485427 -70144723 - AluSx SINE Alu -6 306 17 24 32 0 0 chr5 129485543 129485574 -70144576 + AT_rich Low_complexity Low_complexity 1 31 0 2108 96 43 0 chr5 129485766 129486046 -70144104 - AluSp SINE Alu -21 292 1 620 257 98 16 chr5 129486324 129486506 -70143644 + MLT1F LTR MaLR 1 197 -345 1960 161 18 9 chr5 129486506 129486836 -70143314 + MLT1A1 LTR MaLR 1 333 -32 1125 158 48 24 chr5 129486836 129487045 -70143105 - AluJb SINE Alu -13 299 86 239 135 0 0 chr5 129487045 129487082 -70143068 + MLT1A1 LTR MaLR 326 362 -3 1298 196 92 19 chr5 129487085 129487402 -70142748 + MLT1F LTR MaLR 199 538 -4 649 289 186 25 chr5 129487420 129487742 -70142408 + MLT1J2 LTR MaLR 36 409 -37 1969 121 16 46 chr5 129487985 129488291 -70141859 - AluSx SINE Alu -15 297 1 1700 143 9 70 chr5 129488496 129488811 -70141339 + AluJb SINE Alu 2 297 -15 365 271 69 105 chr5 129488832 129488946 -70141204 - MLT1J LTR MaLR -7 504 387 2849 7 0 0 chr5 129488946 129489251 -70140899 - AluY SINE Alu -6 305 1 365 271 69 105 chr5 129489251 129489498 -70140652 - MLT1J LTR MaLR -124 387 156 1593 164 84 0 chr5 129489913 129490188 -70139962 - AluJb SINE Alu -14 298 1 268 238 267 19 chr5 129490662 129490767 -70139383 - L1ME1 LINE L1 -9 6157 6027 557 278 62 0 chr5 129490767 129490929 -70139221 - L2 LINE L2 -678 2636 2465 1109 251 152 18 chr5 129491145 129491315 -70138835 - MLT1H LTR MaLR -22 527 381 3514 132 40 59 chr5 129491315 129491427 -70138723 - LTR35 LTR ERV1 -1 617 504 2438 61 16 26 chr5 129491427 129491740 -70138410 + AluSp SINE Alu 1 310 -3 3514 132 40 59 chr5 129491740 129492256 -70137894 - LTR35 LTR ERV1 -114 504 1 1109 251 152 18 chr5 129492256 129492532 -70137618 - MLT1H LTR MaLR -168 381 21 2182 109 0 34 chr5 129492793 129493115 -70137035 + AluSx SINE Alu 1 311 -1 186 256 0 0 chr5 129493610 129493649 -70136501 - L2 LINE L2 -18 3295 3257 2183 116 0 0 chr5 129493672 129493966 -70136184 + AluSc SINE Alu 1 294 -15 932 271 75 67 chr5 129494032 129494393 -70135757 + LTR67 LTR ERVL 3 366 -191 2345 102 3 0 chr5 129494430 129494734 -70135416 - AluSp SINE Alu -8 305 1 1105 156 12 0 chr5 129495002 129495175 -70134975 - FRAM SINE Alu -2 174 1 1798 131 4 0 chr5 129495357 129495616 -70134534 + AluSq SINE Alu 1 260 -53 2102 114 0 0 chr5 129496244 129496554 -70133596 - AluSx SINE Alu 0 323 14 2558 227 103 100 chr5 129496602 129497311 -70132839 + L1MC4 LINE L1 6155 6860 -948 1810 161 20 3 chr5 129497311 129497603 -70132547 + AluSx SINE Alu 1 297 -15 2558 227 103 100 chr5 129497603 129497746 -70132404 + L1MC4 LINE L1 6860 7001 -807 6140 44 15 6 chr5 129497746 129498472 -70131678 - L1PA6 LINE L1 -2 6152 5420 2558 227 103 100 chr5 129498472 129499210 -70130940 + L1MC4 LINE L1 7001 7713 -95 328 161 0 123 chr5 129499205 129499286 -70130864 - L1MB8 LINE L1 -153 6025 5955 * 2056 73 51 0 chr5 129499295 129499569 -70130581 - L1PA7 LINE L1 -5 6149 5862 2052 137 72 48 chr5 129499567 129499983 -70130167 - L1MB8 LINE L1 -216 5962 5537 * 1627 215 95 25 chr5 129499981 129500422 -70129728 - L1MB8 LINE L1 -1035 5111 4640 * 5312 138 26 15 chr5 129500512 129501380 -70128770 - L1MC1 LINE L1 0 6333 5456 2462 88 0 0 chr5 129501388 129501696 -70128454 - AluSx SINE Alu -4 308 1 2405 100 0 0 chr5 129501706 129502015 -70128135 - AluSx SINE Alu -3 309 1 2072 213 10 16 chr5 129502015 129502503 -70127647 - L1MC1 LINE L1 -814 5332 4848 1009 232 50 21 chr5 129502528 129502808 -70127342 - L1MC1 LINE L1 -1286 4860 4573 1275 211 56 8 chr5 129502938 129503204 -70126946 + MER63B DNA MER1_type 13 291 -145 296 257 20 50 chr5 129503208 129503277 -70126873 - L1MD1 LINE L1 -11 6231 6164 2612 128 43 25 chr5 129503277 129503714 -70126436 - MER65A LTR ERV1 0 445 1 296 257 20 50 chr5 129503714 129503745 -70126405 - L1MD1 LINE L1 -78 6164 6134 1561 152 59 35 chr5 129503777 129504067 -70126083 - AluJb SINE Alu -15 297 1 954 128 0 47 chr5 129504149 129504321 -70125829 - L1MB2 LINE L1 -3 6168 6005 43357 48 6 1 chr5 129504322 129510406 -70119744 + L1PA4 LINE L1 35 6154 -1 2018 134 9 3 chr5 129510419 129510740 -70119410 - L1MB3 LINE L1 -165 6018 5696 681 162 32 52 chr5 129510744 129510778 -70119372 + MER63B DNA MER1_type 284 317 -743 2165 119 3 0 chr5 129510778 129511073 -70119077 - AluSx SINE Alu -16 296 1 681 162 32 52 chr5 129511073 129511192 -70118958 + MER63B DNA MER1_type 317 434 0 1732 160 24 10 chr5 129512406 129512700 -70117450 - AluJb SINE Alu -14 298 1 2383 64 7 3 chr5 129512727 129513023 -70117127 + AluY SINE Alu 1 297 -14 261 0 0 0 chr5 129513042 129513071 -70117079 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 387 41 0 0 chr5 129513070 129513119 -70117031 + (TG)n Simple_repeat Simple_repeat 2 50 0 230 143 0 0 chr5 129513123 129513165 -70116985 - LTR66 LTR ERVL -171 439 398 6601 87 29 0 chr5 129513165 129514166 -70115984 - L1PA13 LINE L1 -2 6161 5151 5115 61 0 0 chr5 129514168 129514772 -70115378 - L1PA5 LINE L1 0 6154 5551 4442 59 28 0 chr5 129514775 129515350 -70114800 - L1PA5 LINE L1 -859 5287 4697 331 226 0 54 chr5 129515386 129515479 -70114671 - LTR30 LTR ERV1 -108 614 527 2416 41 0 38 chr5 129515479 129515796 -70114354 - L1P LINE L1 -1466 4680 4376 * 5476 129 12 34 chr5 129515790 129516860 -70113290 - THE1B-int LTR MaLR -671 909 1 2470 120 43 0 chr5 129516860 129517209 -70112941 - THE1B LTR MaLR 0 364 1 7329 140 20 3 chr5 129517209 129518396 -70111754 - L1P LINE L1 -1172 4974 3768 2131 133 0 13 chr5 129518500 129518816 -70111334 + AluSx SINE Alu 1 312 0 652 129 0 0 chr5 129518902 129518995 -70111155 + L1PA6 LINE L1 11 103 -6043 5172 61 7 0 chr5 129518995 129520113 -70110037 - MER11A LTR ERVK 0 1266 1 36237 97 16 14 chr5 129520113 129521884 -70108266 + L1PA6 LINE L1 98 1863 -4291 2224 86 19 29 chr5 129521884 129522197 -70107953 - AluY SINE Alu -1 310 1 36237 97 16 14 chr5 129522197 129526471 -70103679 + L1PA6 LINE L1 1863 6152 -2 21 0 0 0 chr5 129526844 129526865 -70103285 + AT_rich Low_complexity Low_complexity 1 21 0 2297 99 0 0 chr5 129527529 129527821 -70102329 + AluSx SINE Alu 1 292 -20 1506 205 3 62 chr5 129528095 129528417 -70101733 - AluJb SINE Alu -9 303 1 49 0 0 0 chr5 129528731 129528780 -70101370 + AT_rich Low_complexity Low_complexity 1 49 0 274 130 93 0 chr5 129528780 129528834 -70101316 - L1PA16 LINE L1 -9 6157 6099 409 301 58 9 chr5 129528872 129529098 -70101052 - L1ME LINE L1 -329 5792 5556 3948 161 31 9 chr5 129529159 129529893 -70100257 - L1MB7 LINE L1 -5 6179 5430 1920 141 3 46 chr5 129529893 129530219 -70099931 - AluSx SINE Alu 0 312 1 500 269 45 85 chr5 129530359 129530734 -70099416 - MER115 DNA AcHobo -86 607 248 817 121 8 8 chr5 129530927 129531059 -70099091 + AluJo/FLAM SINE Alu 2 133 -169 1711 171 24 0 chr5 129531062 129531354 -70098796 + AluSx SINE Alu 1 299 -13 2168 103 7 0 chr5 129531378 129531668 -70098482 + AluSp SINE Alu 2 293 -20 264 83 60 36 chr5 129532042 129532126 -70098024 + A-rich Low_complexity Low_complexity 5 90 0 366 284 152 34 chr5 129532608 129532812 -70097338 + MIR SINE MIR 35 262 0 216 97 0 0 chr5 129533313 129533344 -70096806 + (TG)n Simple_repeat Simple_repeat 2 32 0 2372 78 0 3 chr5 129533805 129534099 -70096051 + AluSc SINE Alu 1 293 -16 1613 158 81 0 chr5 129534279 129534576 -70095574 + AluSx SINE Alu 1 318 0 1305 177 4 22 chr5 129534634 129534866 -70095284 + AluJo SINE Alu 1 228 -84 275 329 131 40 chr5 129535679 129536083 -70094067 + L2 LINE L2 2217 2657 -657 4040 108 25 19 chr5 129536204 129536892 -70093258 - L1MA8 LINE L1 -6 6285 5594 2292 99 7 0 chr5 129538068 129538362 -70091788 - AluSq SINE Alu -17 296 1 815 301 93 59 chr5 129539202 129539314 -70090836 - L2 LINE L2 0 3313 3206 2404 97 3 0 chr5 129539314 129539623 -70090527 - AluSp SINE Alu -3 310 1 815 301 93 59 chr5 129539623 129540167 -70089983 - L2 LINE L2 -107 3206 2627 408 53 0 63 chr5 129540167 129540262 -70089888 + (TA)n Simple_repeat Simple_repeat 2 90 0 436 193 11 0 chr5 129540730 129540818 -70089332 - MER70B LTR ERVL -11 567 479 941 98 8 0 chr5 129541137 129541260 -70088890 - AluSq SINE Alu -82 231 108 534 89 13 0 chr5 129541260 129541339 -70088811 - MER41A LTR ERV1 -474 80 1 195 42 0 0 chr5 129541514 129541538 -70088612 + (CA)n Simple_repeat Simple_repeat 1 24 0 1711 197 33 51 chr5 129541539 129541990 -70088160 + MER65A LTR ERV1 3 445 0 2104 116 0 3 chr5 129542341 129542635 -70087515 - AluSg SINE Alu -17 293 1 1140 201 23 0 chr5 129542864 129543078 -70087072 + MER20 DNA MER1_type 1 219 0 198 0 0 0 chr5 129544065 129544087 -70086063 + (A)n Simple_repeat Simple_repeat 1 22 0 236 149 21 0 chr5 129544669 129544716 -70085434 + CT-rich Low_complexity Low_complexity 5 52 0 556 142 0 135 chr5 129545256 129545404 -70084746 - L1MB7 LINE L1 -18 6166 6039 2233 187 38 24 chr5 129545466 129545964 -70084186 + MLT1D LTR MaLR 1 505 0 1843 169 23 7 chr5 129546643 129546950 -70083200 + AluJb SINE Alu 1 312 0 7091 57 8 1 chr5 129546950 129547918 -70082232 + L1PA8 LINE L1 5196 6169 -3 5826 137 29 30 chr5 129547961 129549039 -70081111 + L1ME LINE L1 20 1096 -5288 641 100 0 0 chr5 129549071 129549171 -70080979 + L1ME LINE L1 1806 1905 -4479 1155 156 21 11 chr5 129549183 129549369 -70080781 + AluJo SINE Alu 1 188 -124 2971 185 36 5 chr5 129549381 129550013 -70080137 + L1MB3 LINE L1 5516 6167 -16 1142 22 0 0 chr5 129550018 129550153 -70079997 - L1PA4 LINE L1 -3 6152 6018 30304 55 2 0 chr5 129600174 129604170 -70025980 - L1P LINE L1 -2140 4006 2 1826 244 66 25 chr5 129604169 129604941 -70025209 + L1ME LINE L1 2476 3279 -3103 * 2298 92 0 3 chr5 129604944 129605237 -70024913 + AluSg SINE Alu 1 292 -18 767 156 66 24 chr5 129605400 129605567 -70024583 - MLT1A1 LTR MaLR -190 175 2 2571 218 75 50 chr5 129605567 129605942 -70024208 + L1ME LINE L1 4239 4603 -1797 1904 151 14 3 chr5 129605942 129606233 -70023917 + AluSx SINE Alu 1 294 -18 2571 218 75 50 chr5 129606233 129607578 -70022572 + L1ME LINE L1 4603 6006 -394 803 240 18 9 chr5 129607574 129607799 -70022351 + L1ME2 LINE L1 4314 4540 -1842 * 945 230 114 26 chr5 129607800 129607880 -70022270 + L1ME2 LINE L1 6010 6082 -318 2011 158 0 13 chr5 129607880 129608184 -70021966 + AluSx SINE Alu 1 300 -12 945 230 114 26 chr5 129608184 129608455 -70021695 + L1ME2 LINE L1 6082 6392 -8 822 184 0 6 chr5 129609642 129609800 -70020350 + MLT1A1 LTR MaLR 1 157 -208 4440 134 19 10 chr5 129609800 129610589 -70019561 + L1MA7 LINE L1 5467 6262 -29 1831 97 8 4 chr5 129610590 129610828 -70019322 + AluY SINE Alu 55 293 -18 1149 174 9 9 chr5 129610828 129611046 -70019104 + MLT1A1 LTR MaLR 148 365 0 2408 163 18 23 chr5 129612069 129612630 -70017520 + L1M4 LINE L1 5187 5746 -432 * 9934 117 25 8 chr5 129612625 129614353 -70015797 + L1PA8 LINE L1 2808 4565 -1581 822 73 0 0 chr5 129614353 129614462 -70015688 - THE1A LTR MaLR 0 355 247 339 65 0 0 chr5 129614491 129614537 -70015613 - THE1A LTR MaLR -309 46 1 11670 95 11 1 chr5 129614537 129616100 -70014050 - THE1A-int LTR MaLR 0 1580 1 2623 98 0 6 chr5 129616100 129616457 -70013693 - THE1A LTR MaLR 0 355 1 5960 98 25 15 chr5 129616457 129617564 -70012586 + L1PA8 LINE L1 4561 5702 -470 1977 138 3 3 chr5 129617564 129617861 -70012289 + AluSx SINE Alu 1 297 -15 5960 98 25 15 chr5 129617861 129618328 -70011822 + L1PA8 LINE L1 5702 6163 -9 1445 218 48 54 chr5 129618466 129618929 -70011221 + MLT1C LTR MaLR 8 467 0 15111 51 0 3 chr5 129619007 129621728 -70008422 + L1PA5 LINE L1 3458 6154 0 1632 192 0 21 chr5 129621825 129622112 -70008038 + AluJo SINE Alu 1 281 -31 1353 179 41 6 chr5 129622122 129622486 -70007664 + MER114 LTR ERV 15 391 -257 4819 232 90 27 chr5 129622489 129622538 -70007612 + L1MB3 LINE L1 5 49 -6595 384 35 18 0 chr5 129622538 129622595 -70007555 + L1PA3 LINE L1 6098 6155 0 4819 232 90 27 chr5 129622595 129622960 -70007190 + L1MB3 LINE L1 49 390 -6254 2075 146 22 11 chr5 129622960 129623322 -70006828 + MER47A DNA MER2_type 1 366 0 4819 232 90 27 chr5 129623322 129623541 -70006609 + L1MB3 LINE L1 390 594 -6050 2807 13 0 0 chr5 129623541 129623849 -70006301 + AluYa5 SINE Alu 1 308 -3 4819 232 90 27 chr5 129623849 129625327 -70004823 + L1MB3 LINE L1 594 1977 -4667 2277 120 22 33 chr5 129625327 129625695 -70004455 - THE1B LTR MaLR 0 364 1 1775 73 0 35 chr5 129625696 129625928 -70004222 + AluY SINE Alu 72 295 -16 4819 232 90 27 chr5 129625928 129626537 -70003613 + L1MB3 LINE L1 1977 2546 -4098 1789 164 38 26 chr5 129626537 129626879 -70003271 - MER7A DNA MER2_type 0 346 3 4819 232 90 27 chr5 129626879 129627326 -70002824 + L1MB3 LINE L1 2546 3393 -3251 554 219 92 37 chr5 129627326 129627490 -70002660 - MLT1A1 LTR MaLR 0 365 193 264 228 13 51 chr5 129627502 129627581 -70002569 - MLT1A1-int LTR MaLR -355 1016 941 2597 204 39 16 chr5 129627735 129628298 -70001852 - MLT1A1-int LTR MaLR -959 776 201 544 195 9 0 chr5 129628743 129628856 -70001294 + MER70B LTR ERVL 454 567 -11 757 151 199 5 chr5 129628871 129629057 -70001093 - MLT1A1-int LTR MaLR -1135 236 15 843 208 32 32 chr5 129629071 129629287 -70000863 - MLT1A1 LTR MaLR 0 365 150 3968 190 39 25 chr5 129629312 129630048 -70000102 + L1MA9 LINE L1 4851 5620 -692 1757 112 0 0 chr5 129630048 129630272 -69999878 + AluSx SINE Alu 44 267 -45 3968 190 39 25 chr5 129630272 129630935 -69999215 + L1MA9 LINE L1 5620 6272 -40 388 173 0 0 chr5 129630981 129631062 -69999088 + L1MB3 LINE L1 3823 3903 -2741 252 171 0 0 chr5 129631131 129631172 -69998978 - FAM SINE Alu -12 167 127 1178 175 10 10 chr5 129631172 129631372 -69998778 - AluJo SINE Alu -92 220 21 4773 149 35 30 chr5 129631372 129631760 -69998390 + L1MB3 LINE L1 5610 5995 -686 2023 137 3 22 chr5 129631760 129632075 -69998075 + AluSx SINE Alu 2 310 -2 4773 149 35 30 chr5 129632075 129632750 -69997400 + L1MB3 LINE L1 5995 6681 0 1269 150 26 0 chr5 129632745 129632971 -69997179 + L1M3 LINE L1 5593 5824 -359 * 16583 42 1 0 chr5 129632971 129635785 -69994365 + L1PA4 LINE L1 3332 6150 -5 463 238 157 20 chr5 129635803 129636053 -69994097 - L1MEc LINE L1 -3903 2331 2067 243 270 63 56 chr5 129636400 129636526 -69993624 + MIR SINE MIR 2 128 -134 23 33 0 0 chr5 129636748 129636778 -69993372 + AT_rich Low_complexity Low_complexity 1 30 0 205 311 72 18 chr5 129637777 129637947 -69992203 + MIR SINE MIR 39 215 -47 1287 123 63 48 chr5 129638126 129638378 -69991772 - Tigger2 DNA MER2_type 0 2718 2463 4566 129 16 11 chr5 129638434 129639187 -69990963 - Tigger2 DNA MER2_type -1961 757 1 63 57 0 0 chr5 129639629 129639734 -69990416 + AT_rich Low_complexity Low_complexity 1 105 0 760 290 99 53 chr5 129639881 129640367 -69989783 + MLT1J LTR MaLR 1 508 -3 267 231 46 0 chr5 129641108 129641173 -69988977 - MER66A LTR ERV1 -142 336 269 1188 284 155 6 chr5 129642143 129642633 -69987517 + L2 LINE L2 1594 2156 -1158 2506 204 31 35 chr5 129642829 129643407 -69986743 - MER82 DNA MER2_type -77 576 1 290 335 69 0 chr5 129643408 129643596 -69986554 - L1MC/D LINE L1 -2205 5603 5403 225 83 0 0 chr5 129643639 129643675 -69986475 + (GA)n Simple_repeat Simple_repeat 1 36 0 357 304 76 22 chr5 129643676 129643860 -69986290 - L1MC/D LINE L1 -798 5348 5155 4014 206 60 12 chr5 129643898 129644891 -69985259 + L1PB1 LINE L1 6 1046 -5817 9942 201 62 9 chr5 129644894 129649840 -69980310 + L1PB1 LINE L1 1093 6510 -357 201 182 13 26 chr5 129649843 129649920 -69980230 + (TA)n Simple_repeat Simple_repeat 2 77 0 447 19 0 0 chr5 129649930 129649982 -69980168 + (CA)n Simple_repeat Simple_repeat 1 52 0 2361 110 3 3 chr5 129649984 129650340 -69979810 + L1PB1 LINE L1 6512 6867 0 13489 168 26 19 chr5 129650457 129651743 -69978407 - L1MA3 LINE L1 -1 7723 6446 1962 157 7 0 chr5 129651743 129652036 -69978114 - AluSx SINE Alu -17 295 1 13489 168 26 19 chr5 129652036 129654853 -69975297 - L1MA3 LINE L1 -1278 6446 3595 3274 116 25 35 chr5 129656117 129656755 -69973395 - L1MA3 LINE L1 -3955 3610 2979 1445 58 0 0 chr5 129656755 129656929 -69973221 - AluY SINE Alu -2 309 136 12601 127 19 5 chr5 129656929 129658983 -69971167 - L1MA3 LINE L1 -4571 2994 912 5351 111 24 18 chr5 129658980 129660016 -69970134 - L1PB2 LINE L1 -1 6150 5107 * 2334 150 12 2 chr5 129660018 129660833 -69969317 - L1MA3 LINE L1 -6641 924 22 32 26 0 0 chr5 129660882 129660921 -69969229 + AT_rich Low_complexity Low_complexity 1 39 0 451 101 90 0 chr5 129661009 129661098 -69969052 + L1MA8 LINE L1 6190 6286 -5 244 271 46 36 chr5 129662689 129662871 -69967279 - MLT1F LTR MaLR 0 542 413 522 215 245 0 chr5 129663595 129663758 -69966392 + MLT2B1 LTR ERVL 228 430 -90 1660 215 74 22 chr5 129665160 129665565 -69964585 + MLT1D LTR MaLR 2 427 -78 2895 13 0 0 chr5 129666814 129667130 -69963020 + AluYb8 SINE Alu 1 316 -2 448 275 181 0 chr5 129667287 129667447 -69962703 + MIR SINE MIR 3 191 -71 518 272 31 15 chr5 129667455 129667650 -69962500 + LTR33 LTR ERVL 1 198 -323 311 272 19 19 chr5 129667717 129667820 -69962330 + LTR33 LTR ERVL 304 406 -115 21 0 0 0 chr5 129671294 129671315 -69958835 + AT_rich Low_complexity Low_complexity 1 21 0 768 112 0 0 chr5 129671648 129671764 -69958386 + L1MB8 LINE L1 6063 6178 0 2277 103 0 7 chr5 129672681 129672983 -69957167 + AluSg SINE Alu 1 300 -10 960 180 11 32 chr5 129673276 129673465 -69956685 - AluJb SINE Alu 0 312 128 299 299 8 87 chr5 129675990 129676117 -69954033 - MIR SINE MIR -67 141 25 2103 96 0 0 chr5 129676392 129676663 -69953487 - AluSx SINE Alu -41 271 1 2289 70 3 17 chr5 129676985 129677286 -69952864 - AluY SINE Alu -14 297 1 278 229 57 0 chr5 129677909 129677979 -69952171 - MIR SINE MIR -108 154 81 295 364 0 0 chr5 129677997 129678096 -69952054 - MIR SINE MIR -12 250 152 4265 108 32 31 chr5 129679520 129680183 -69949967 + L1MA5A LINE L1 5572 6238 -59 1696 177 3 27 chr5 129680183 129680482 -69949668 + AluJo SINE Alu 2 293 -19 4265 108 32 31 chr5 129680482 129680538 -69949612 + L1MA5A LINE L1 6238 6292 -5 560 314 86 35 chr5 129681157 129681704 -69948446 - L1M4 LINE L1 -5966 576 2 2550 111 14 3 chr5 129681982 129682353 -69947797 + THE1C LTR MaLR 1 375 0 556 116 0 12 chr5 129682355 129682441 -69947709 + THE1C-int LTR MaLR 3 87 -1564 2293 210 42 32 chr5 129682445 129683160 -69946990 - LTR27 LTR ERV1 0 698 7 468 119 0 0 chr5 129683165 129683232 -69946918 + THE1C-int LTR MaLR 87 153 -1427 9428 126 39 14 chr5 129683232 129684680 -69945470 + THE1C-int LTR MaLR 97 1580 0 2650 98 16 0 chr5 129684680 129685049 -69945101 + THE1C LTR MaLR 1 375 0 656 130 114 0 chr5 129685051 129685174 -69944976 - L1MA5 LINE L1 -21 6279 6143 23 54 0 0 chr5 129685479 129685516 -69944634 + AT_rich Low_complexity Low_complexity 1 37 0 368 285 113 20 chr5 129685884 129686035 -69944115 + MLT1J2 LTR MaLR 264 428 -22 674 128 9 18 chr5 129686484 129686593 -69943557 + AluJb SINE Alu 190 297 -15 1701 196 50 169 chr5 129686597 129687587 -69942563 + L1MC3 LINE L1 5279 6157 -1628 651 300 75 88 chr5 129688777 129689758 -69940392 + L1MEd LINE L1 5 973 -5146 276 292 13 3 chr5 129689900 129689994 -69940156 + MER5A DNA MER1_type 6 110 -79 212 275 0 0 chr5 129690017 129690057 -69940093 + MER5A DNA MER1_type 1 40 -149 1012 144 14 0 chr5 129690065 129690211 -69939939 - AluJo SINE Alu -164 148 1 426 237 136 0 chr5 129690212 129690330 -69939820 + MER5A DNA MER1_type 50 183 -6 378 273 9 45 chr5 129690845 129690955 -69939195 + L2 LINE L2 3167 3272 0 2150 187 19 0 chr5 129691232 129691595 -69938555 + MSTB LTR MaLR 1 370 -56 879 124 12 6 chr5 129691595 129691764 -69938386 + (TTCC)n Simple_repeat Simple_repeat 4 173 0 2364 96 0 3 chr5 129691770 129692082 -69938068 - AluSq SINE Alu -2 311 1 444 134 0 0 chr5 129692082 129692149 -69938001 + MSTB LTR MaLR 362 428 -4 2037 115 49 0 chr5 129692276 129692563 -69937587 - AluSp SINE Alu -12 301 1 285 301 90 25 chr5 129692725 129693044 -69937106 + HAL1 LINE L1 27 405 -2102 739 256 96 70 chr5 129693387 129693785 -69936365 - MLT1L LTR MaLR -2 613 206 1491 215 16 58 chr5 129693966 129694343 -69935807 - MLT1A1 LTR MaLR -2 363 3 2601 53 3 0 chr5 129694517 129694837 -69935313 + L1PA7 LINE L1 5823 6143 -11 776 292 133 13 chr5 129696474 129696857 -69933293 + L2 LINE L2 2272 2700 -614 1005 167 0 17 chr5 129696857 129697031 -69933119 + AluJo SINE Alu 121 291 -21 468 291 42 42 chr5 129697031 129697268 -69932882 + L2 LINE L2 2712 2948 -366 2042 193 64 15 chr5 129697367 129697848 -69932302 - MLT1D LTR MaLR 0 505 1 248 196 22 0 chr5 129698017 129698063 -69932087 - L2 LINE L2 -6 3266 3220 22 0 0 0 chr5 129698810 129698832 -69931318 + AT_rich Low_complexity Low_complexity 1 22 0 335 339 40 16 chr5 129699302 129699426 -69930724 + L2 LINE L2 2903 3029 -243 195 267 0 0 chr5 129699849 129699894 -69930256 + MIR SINE MIR 50 94 -114 2197 187 7 2 chr5 129700382 129700843 -69929307 + L1PA14 LINE L1 2752 3214 -2932 6233 29 0 17 chr5 129700849 129701608 -69928542 + L1PA4 LINE L1 5410 6155 0 10149 164 21 9 chr5 129701616 129703212 -69926938 + L1PA14 LINE L1 3229 4804 -1357 1829 128 57 38 chr5 129703212 129703580 -69926570 - THE1C LTR MaLR 0 375 1 9688 123 18 45 chr5 129703580 129703899 -69926251 - THE1C-int LTR MaLR 0 1580 1254 2373 99 0 3 chr5 129703899 129704211 -69925939 - AluSq SINE Alu -2 311 1 9688 123 18 45 chr5 129704211 129705512 -69924638 - THE1C-int LTR MaLR -326 1254 4 1735 162 40 30 chr5 129705515 129705886 -69924264 - THE1C LTR MaLR 0 375 1 10149 164 21 9 chr5 129705886 129707238 -69922912 + L1PA14 LINE L1 4805 6161 0 2946 219 39 20 chr5 129707620 129708310 -69921840 + MER21B LTR ERV1 12 714 -149 997 234 73 37 chr5 129709197 129709470 -69920680 - LTR40b LTR ERVL -179 283 1 3284 136 34 0 chr5 129709709 129710128 -69920022 + MER41C LTR ERV1 1 443 -111 2265 105 3 0 chr5 129710128 129710432 -69919718 - AluSx SINE Alu -7 305 1 3284 136 34 0 chr5 129710432 129710548 -69919602 + MER41C LTR ERV1 443 554 0 5373 161 9 6 chr5 129711435 129712422 -69917728 + L1 LINE L1 3978 4967 -1179 3545 198 15 24 chr5 129712420 129712586 -69917564 - L1 LINE L1 -1027 5119 4953 * 1836 127 69 0 chr5 129712586 129712862 -69917288 - AluSc SINE Alu -14 295 1 3545 198 15 24 chr5 129712862 129713571 -69916579 - L1 LINE L1 -1193 4953 4252 * 5517 190 14 20 chr5 129713545 129714724 -69915426 - L1 LINE L1 -1493 4653 3482 4031 48 2 6 chr5 129714710 129715246 -69914904 + L1PA3 LINE L1 5633 6166 0 * 6798 55 8 2 chr5 129715246 129716119 -69914031 + L1PA6 LINE L1 5275 6152 -2 2100 231 85 18 chr5 129716181 129716980 -69913170 + L1ME LINE L1 4635 5483 -683 5843 21 0 1 chr5 129716985 129717657 -69912493 - L1PA3 LINE L1 -127 6028 5358 1033 40 0 0 chr5 129717657 129717777 -69912373 + L1PA3 LINE L1 6030 6155 0 262 318 0 11 chr5 129717781 129717869 -69912281 + GA-rich Low_complexity Low_complexity 2 88 0 490 257 0 0 chr5 129717870 129717975 -69912175 + L1ME LINE L1 5479 5583 -583 1434 265 106 5 chr5 129718022 129718464 -69911686 - L2 LINE L2 -1560 1754 1268 303 122 0 0 chr5 129720299 129720348 -69909802 + (CA)n Simple_repeat Simple_repeat 2 50 0 2291 99 0 0 chr5 129721341 129721633 -69908517 - AluSx SINE Alu -20 292 1 3201 213 73 32 chr5 129721845 129722443 -69907707 + L1MDb LINE L1 574 1216 -5190 1661 88 88 4 chr5 129722443 129722681 -69907469 - AluY SINE Alu -4 307 50 3201 213 73 32 chr5 129722681 129723061 -69907089 + L1MDb LINE L1 1216 1579 -4827 515 267 0 0 chr5 129723063 129723194 -69906956 + L1MDb LINE L1 2450 2580 -4007 10962 182 34 14 chr5 129723195 129726432 -69903718 + L1MA4 LINE L1 4 3451 -3031 3923 103 43 2 chr5 129726432 129727007 -69903143 - L1PA13 LINE L1 -11 6152 5554 10962 182 34 14 chr5 129727007 129729813 -69900337 + L1MA4 LINE L1 3451 6198 -284 3712 73 4 0 chr5 129729869 129730351 -69899799 + L1PA7 LINE L1 5666 6149 -5 1008 123 0 0 chr5 129730351 129730505 -69899645 + L1P LINE L1 3734 3887 -2259 23 33 0 0 chr5 129730550 129730580 -69899570 + AT_rich Low_complexity Low_complexity 1 30 0 2677 17 0 0 chr5 129730625 129730920 -69899230 + AluY SINE Alu 1 295 -16 760 315 82 19 chr5 129730941 129731466 -69898684 - L2 LINE L2 -129 3184 2633 1480 182 40 7 chr5 129732094 129732369 -69897781 + AluJo SINE Alu 3 286 -26 22 35 0 0 chr5 129732369 129732398 -69897752 + AT_rich Low_complexity Low_complexity 1 29 0 327 301 102 36 chr5 129732943 129733109 -69897041 + HAL1 LINE L1 2 178 -2329 2220 265 95 57 chr5 129733338 129734497 -69895653 + HAL1 LINE L1 532 1734 -773 1539 174 132 36 chr5 129734498 129734861 -69895289 - MLT1D LTR MaLR 0 505 108 6262 122 8 7 chr5 129734869 129735795 -69894355 + L1PA8A LINE L1 32 958 -4917 2120 99 0 27 chr5 129735798 129736090 -69894060 + AluY SINE Alu 4 287 -24 566 151 0 0 chr5 129736104 129736190 -69893960 + L1PA6 LINE L1 11 96 -6050 29252 68 60 14 chr5 129736190 129741260 -69888890 + L1PA6 LINE L1 847 6154 0 26189 139 8 14 chr5 129741265 129746746 -69883404 + L1PA8A LINE L1 987 6475 -6 623 170 9 9 chr5 129747121 129747227 -69882923 - MLT1D LTR MaLR -399 106 1 1468 269 50 25 chr5 129747327 129747680 -69882470 + HAL1 LINE L1 1852 2230 -277 1548 148 122 4 chr5 129747680 129747943 -69882207 + AluJb SINE Alu 3 296 -16 1468 269 50 25 chr5 129747943 129748229 -69881921 + HAL1 LINE L1 2230 2507 0 501 266 53 86 chr5 129748513 129748708 -69881442 + L2 LINE L2 3008 3191 -122 2044 147 21 15 chr5 129748708 129749042 -69881108 + MER1B DNA MER1_type 1 336 -1 501 266 53 86 chr5 129749042 129749147 -69881003 + L2 LINE L2 3191 3298 -15 499 262 73 6 chr5 129749269 129749433 -69880717 + MIR SINE MIR 12 186 -76 266 372 124 0 chr5 129750786 129750923 -69879227 - L2 LINE L2 0 3272 3119 4193 186 103 74 chr5 129751191 129751919 -69878231 + Charlie6 DNA MER1_type 204 909 -2591 739 118 18 0 chr5 129751919 129752029 -69878121 - L1MA2 LINE L1 0 6304 6193 4193 186 103 74 chr5 129752029 129752301 -69877849 + Charlie6 DNA MER1_type 909 1171 -2329 1957 147 0 0 chr5 129752301 129752594 -69877556 + AluSx SINE Alu 1 293 -19 4193 186 103 74 chr5 129752594 129752737 -69877413 + Charlie6 DNA MER1_type 1171 1387 -2113 670 169 32 0 chr5 129752737 129752861 -69877289 + L1MB7 LINE L1 6041 6168 -16 4193 186 103 74 chr5 129752861 129752897 -69877253 + Charlie6 DNA MER1_type 1387 1420 -2080 2117 187 50 4 chr5 129753296 129753734 -69876416 + MLT2B1 LTR ERVL 2 518 -2 281 247 96 48 chr5 129754549 129754695 -69875455 - L1ME LINE L1 -5907 163 11 556 314 27 27 chr5 129755280 129755503 -69874647 + MIR SINE MIR 40 262 0 27 0 0 0 chr5 129757054 129757081 -69873069 + AT_rich Low_complexity Low_complexity 1 27 0 2514 60 3 0 chr5 129757609 129757910 -69872240 - AluY SINE Alu -9 302 1 725 208 0 0 chr5 129757967 129758092 -69872058 - FLAM_C SINE Alu -18 125 1 2164 210 100 33 chr5 129758236 129759086 -69871064 + L1M3 LINE L1 4661 5583 -588 1994 142 17 0 chr5 129759087 129759389 -69870761 + AluSx SINE Alu 2 308 -4 6812 197 13 27 chr5 129759402 129761010 -69869140 + L1 LINE L1 3068 4653 -1493 3545 198 15 24 chr5 129760984 129761693 -69868457 + L1 LINE L1 4252 4953 -1193 * 1836 127 69 0 chr5 129761693 129761969 -69868181 + AluSc SINE Alu 1 295 -14 3545 198 15 24 chr5 129761969 129762135 -69868015 + L1 LINE L1 4953 5119 -1027 * 3949 158 11 7 chr5 129762133 129762873 -69867277 - L1 LINE L1 -1179 4967 4225 1464 179 96 13 chr5 129864269 129864581 -69765569 + MER2 DNA MER2_type 1 338 -7 243 0 0 0 chr5 129864588 129864615 -69765535 + (TG)n Simple_repeat Simple_repeat 2 28 0 372 313 68 20 chr5 129864865 129865012 -69765138 + L2 LINE L2 2900 3053 -219 430 242 96 38 chr5 129865032 129865189 -69764961 + LTR50 LTR ERVL 32 197 -598 2304 57 4 0 chr5 129865365 129865700 -69764450 - AluY SINE Alu 0 336 1 270 0 0 0 chr5 129866225 129866255 -69763895 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 189 94 0 0 chr5 129866861 129866893 -69763257 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2069 106 0 27 chr5 129866895 129867187 -69762963 - AluSq SINE Alu -29 284 1 6301 81 31 1 chr5 129967192 129968897 -69661253 + L1PA13 LINE L1 4433 6159 -4 2207 132 122 62 chr5 129969095 129969579 -69660571 + MER67D LTR ERV1 1 513 -1 1739 152 75 6 chr5 129970143 129970465 -69659685 - MER2 DNA MER2_type 0 344 1 207 0 0 0 chr5 129970508 129970531 -69659619 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 309 314 130 34 chr5 129972090 129972297 -69657853 - MIR SINE MIR -16 246 20 2553 111 5 13 chr5 129972661 129973039 -69657111 + THE1C LTR MaLR 1 375 0 10140 119 50 6 chr5 129973039 129974552 -69655598 + THE1C-int LTR MaLR 1 1580 0 2634 101 5 11 chr5 129974552 129974929 -69655221 + THE1C LTR MaLR 1 375 0 429 240 119 0 chr5 129975074 129975201 -69654949 + MIR SINE MIR 59 197 -62 2380 77 3 0 chr5 129975788 129976086 -69654064 + AluY SINE Alu 1 299 -12 246 143 0 0 chr5 129976204 129976253 -69653897 + (CA)n Simple_repeat Simple_repeat 2 50 0 319 195 126 11 chr5 129976437 129976524 -69653626 - MER5C DNA MER1_type 0 324 228 334 212 224 12 chr5 129976574 129976659 -69653491 - MER5C DNA MER1_type -215 109 7 225 247 34 11 chr5 129977003 129977092 -69653058 - HAL1b LINE L1 -767 581 491 197 0 71 0 chr5 129977092 129977120 -69653030 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 27525 38 14 1 chr5 129977120 129983136 -69647014 - L1PA3 LINE L1 -10 6145 4 300 349 31 26 chr5 129983138 129983333 -69646817 - HAL1b LINE L1 -858 490 295 1937 139 0 4 chr5 129983356 129983666 -69646484 + AluSx SINE Alu 3 311 0 22 0 0 0 chr5 129983875 129983897 -69646253 + AT_rich Low_complexity Low_complexity 1 22 0 561 115 26 44 chr5 129983937 129984050 -69646100 - L1MA9 LINE L1 -144 6168 6058 1751 188 86 0 chr5 129984308 129984644 -69645506 + MLT1A1 LTR MaLR 1 365 0 501 325 30 30 chr5 129985396 129985667 -69644483 - L2 LINE L2 -775 2539 2269 999 302 72 59 chr5 129985671 129986238 -69643912 - L2 LINE L2 -938 2376 1799 2127 161 51 33 chr5 129986238 129986729 -69643421 - L1MA7 LINE L1 0 6291 5792 999 302 72 59 chr5 129986729 129986790 -69643360 - L2 LINE L2 -1515 1799 1740 676 329 53 29 chr5 129986937 129987311 -69642839 - L2 LINE L2 -1548 1766 1384 426 355 20 7 chr5 129987519 129987671 -69642479 - MIR SINE MIR -107 155 2 1157 169 4 0 chr5 129988321 129988546 -69641604 + L1MA4 LINE L1 6069 6294 -6 261 0 0 0 chr5 129990483 129990512 -69639638 + (GA)n Simple_repeat Simple_repeat 1 29 0 271 261 51 38 chr5 129990937 129991094 -69639056 - L1ME4a LINE L1 -2 6119 5961 3765 104 13 63 chr5 129991428 129992062 -69638088 - LTR43 LTR ERV1 0 602 1 235 308 9 0 chr5 129992201 129992308 -69637842 - L1ME4a LINE L1 -330 5791 5684 292 226 43 9 chr5 129992476 129992591 -69637559 + (TA)n Simple_repeat Simple_repeat 1 119 0 330 317 123 33 chr5 129993075 129993115 -69637035 - L1ME4a LINE L1 -2362 3784 3749 1724 160 7 52 chr5 129993115 129993422 -69636728 + AluJb SINE Alu 2 294 -18 330 317 123 33 chr5 129993422 129993624 -69636526 - L1ME4a LINE L1 -2397 3749 3520 1687 163 70 20 chr5 129993627 129993984 -69636166 - THE1C LTR MaLR 0 375 1 9035 114 29 25 chr5 129993984 129995376 -69634774 - THE1C-int LTR MaLR 0 1580 184 2223 136 8 24 chr5 129997345 129997714 -69632436 + THE1B LTR MaLR 1 363 -1 681 302 14 36 chr5 129998713 129998935 -69631215 - MLT1I LTR MaLR -5 404 188 2251 137 57 3 chr5 129999077 129999465 -69630685 - L1MA9 LINE L1 -5 7726 7318 2892 172 57 0 chr5 129999466 130000047 -69630103 - L1MA9 LINE L1 -1206 6359 5746 1427 217 53 35 chr5 130000050 130000483 -69629667 - L1MA9 LINE L1 -3261 4304 3864 256 155 28 0 chr5 130000649 130000720 -69629430 + (TA)n Simple_repeat Simple_repeat 1 73 0 300 256 22 22 chr5 130000726 130000816 -69629334 - L1MC4 LINE L1 -1339 6703 6614 2264 253 53 29 chr5 130000829 130001819 -69628331 - L1MA9 LINE L1 -3852 3713 2690 278 258 4 4 chr5 130003106 130003366 -69626784 + (TG)n Simple_repeat Simple_repeat 1 260 0 330 285 139 36 chr5 130003679 130003816 -69626334 + MER91A DNA MER1_type 14 164 -32 445 316 39 47 chr5 130005026 130005260 -69624890 + MIR SINE MIR 6 237 -25 1396 207 0 20 chr5 130005493 130005744 -69624406 + Tigger7 DNA MER2_type 1 246 -487 2001 263 106 36 chr5 130006249 130007090 -69623060 - L1ME3A LINE L1 -10 6160 5261 232 215 15 15 chr5 130007087 130007152 -69622998 - L1ME LINE L1 -243 5919 5855 * 3655 176 10 3 chr5 130007160 130008026 -69622124 - L1PB4 LINE L1 -256 5900 5031 9958 152 19 4 chr5 130008042 130010807 -69619343 - L1MA1 LINE L1 0 6302 3496 1016 148 0 0 chr5 130010814 130010969 -69619181 - AluSg/x SINE Alu -12 298 144 303 146 0 0 chr5 130010969 130011010 -69619140 - Alu SINE Alu -261 41 1 1185 128 6 6 chr5 130011020 130011199 -69618951 - AluSc SINE Alu -12 297 119 24349 40 4 0 chr5 130011216 130015004 -69615146 - L1PA4 LINE L1 -10 6145 2348 18576 61 9 0 chr5 130015004 130017383 -69612767 - L1PA4 LINE L1 -3746 2400 1 848 271 41 43 chr5 130017384 130017656 -69612494 - L1M4 LINE L1 -2909 3237 2965 1578 128 4 9 chr5 130017656 130017813 -69612337 - AluSg/x SINE Alu -21 291 134 1977 139 7 0 chr5 130017813 130018108 -69612042 - AluSq SINE Alu -16 297 1 1578 128 4 9 chr5 130018108 130018177 -69611973 - AluSg/x SINE Alu -178 134 66 848 271 41 43 chr5 130018177 130018435 -69611715 - L1M4 LINE L1 -3181 2965 2708 599 360 4 8 chr5 130018436 130018683 -69611467 + MIR SINE MIR 17 262 0 23 33 0 0 chr5 130018863 130018893 -69611257 + AT_rich Low_complexity Low_complexity 1 30 0 1067 192 25 0 chr5 130018960 130019163 -69610987 + MER3 DNA MER1_type 2 209 0 680 284 41 21 chr5 130019352 130019714 -69610436 + MLT1I LTR MaLR 1 407 -2 347 286 136 0 chr5 130020135 130020289 -69609861 - HAL1b LINE L1 -742 606 432 2335 87 43 11 chr5 130020301 130020648 -69609502 - L1PB1 LINE L1 0 6151 5794 240 35 0 0 chr5 130020651 130020680 -69609470 + (TA)n Simple_repeat Simple_repeat 2 30 0 378 127 0 0 chr5 130020680 130020751 -69609399 + (CA)n Simple_repeat Simple_repeat 1 71 0 958 226 81 48 chr5 130020753 130021247 -69608903 - HAL1b LINE L1 -369 5782 95 291 214 43 14 chr5 130022309 130022379 -69607771 + CT-rich Low_complexity Low_complexity 3 74 0 182 61 0 30 chr5 130022994 130023027 -69607123 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 895 308 49 29 chr5 130024315 130024663 -69605487 + LTR16C LTR ERVL 133 487 -4 381 75 0 0 chr5 130025003 130025056 -69605094 + (CA)n Simple_repeat Simple_repeat 2 54 0 28 0 0 0 chr5 130026639 130026667 -69603483 + AT_rich Low_complexity Low_complexity 1 28 0 463 265 184 36 chr5 130027158 130027354 -69602796 - MIR SINE MIR -6 256 32 2154 115 0 46 chr5 130027753 130028259 -69601891 - AluSg SINE Alu 0 310 1 25 0 0 0 chr5 130028845 130028870 -69601280 + AT_rich Low_complexity Low_complexity 1 25 0 1705 58 0 0 chr5 130028870 130029095 -69601055 - L1MA2 LINE L1 0 6304 6080 22 0 0 0 chr5 130030224 130030246 -69599904 + AT_rich Low_complexity Low_complexity 1 22 0 4132 134 43 51 chr5 130030275 130030518 -69599632 - L1MA4A LINE L1 -11 6292 6049 2347 93 0 10 chr5 130030518 130030831 -69599319 + AluY SINE Alu 1 310 -1 4132 134 43 51 chr5 130030831 130031431 -69598719 - L1MA4A LINE L1 -254 6049 5456 207 114 0 0 chr5 130031596 130031631 -69598519 + (GA)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr5 130031802 130031827 -69598323 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 130032969 130033000 -69597150 + AT_rich Low_complexity Low_complexity 1 31 0 235 324 19 19 chr5 130033772 130033880 -69596270 + MIR SINE MIR 60 167 -95 2141 117 0 0 chr5 130034802 130035119 -69595031 + AluY SINE Alu 1 317 0 334 290 71 101 chr5 130035354 130035392 -69594758 + HAL1 LINE L1 802 840 -1667 2070 113 31 3 chr5 130035392 130035685 -69594465 + AluSc SINE Alu 1 301 -8 334 290 71 101 chr5 130035685 130035748 -69594402 + HAL1 LINE L1 840 903 -1604 4939 101 14 25 chr5 130035748 130036538 -69593612 + L1MA2 LINE L1 5514 6294 -10 334 290 71 101 chr5 130036538 130036800 -69593350 + HAL1 LINE L1 903 1155 -1352 409 303 237 14 chr5 130037155 130037590 -69592560 - MLT1L LTR MaLR -83 532 1 2643 55 0 0 chr5 130037675 130037986 -69592164 + AluY SINE Alu 1 311 0 219 69 0 0 chr5 130038616 130038645 -69591505 + (CTG)n Simple_repeat Simple_repeat 1 29 0 938 194 11 5 chr5 130039149 130039335 -69590815 - MER5A DNA MER1_type -2 187 1 274 317 89 0 chr5 130039430 130039531 -69590619 + L2 LINE L2 3154 3263 -9 192 302 70 23 chr5 130040405 130040491 -69589659 + L2 LINE L2 3161 3250 -22 1822 178 15 15 chr5 130041372 130041715 -69588435 - MER61A LTR ERV1 0 343 1 1336 184 139 4 chr5 130041984 130042250 -69587900 - AluJo SINE Alu 0 302 1 4096 49 14 8 chr5 130042419 130042929 -69587221 - L1PA7 LINE L1 -11 6143 5631 1394 55 0 0 chr5 130042961 130043142 -69587008 + L1P LINE L1 2925 3105 -3041 27 49 0 0 chr5 130043360 130043401 -69586749 + AT_rich Low_complexity Low_complexity 1 41 0 394 317 98 6 chr5 130043544 130043708 -69586442 - MER117 DNA MER1_type -10 187 9 702 0 0 0 chr5 130044021 130044103 -69586047 + L1PA4 LINE L1 6072 6153 -2 362 311 83 6 chr5 130044139 130044319 -69585831 - MIR SINE MIR -17 245 52 356 0 23 0 chr5 130044525 130044569 -69585581 + (TAA)n Simple_repeat Simple_repeat 2 46 0 590 298 73 5 chr5 130044693 130045076 -69585074 - L1M4 LINE L1 -1582 4564 4156 4375 156 85 16 chr5 130045118 130045575 -69584575 - L1MA7 LINE L1 0 6291 5867 11360 25 0 0 chr5 130045575 130046733 -69583417 + L1PA3 LINE L1 4034 5176 -979 2645 19 6 10 chr5 130046733 130047045 -69583105 + AluY SINE Alu 1 311 0 11360 25 0 0 chr5 130047045 130048015 -69582135 + L1PA3 LINE L1 5175 6144 -11 480 18 0 0 chr5 130048015 130048072 -69582078 + (CA)n Simple_repeat Simple_repeat 2 58 0 4375 156 85 16 chr5 130048072 130048543 -69581607 - L1MA7 LINE L1 -423 5868 5298 3330 259 61 79 chr5 130048511 130051003 -69579147 - L1ME LINE L1 -1640 4440 1991 * 494 317 130 42 chr5 130051097 130051260 -69578890 - L1ME LINE L1 -4308 1953 1806 2158 126 3 0 chr5 130051260 130051554 -69578596 + AluSx SINE Alu 1 295 -17 494 317 130 42 chr5 130051554 130051914 -69578236 - L1ME LINE L1 -4455 1806 1384 240 275 68 58 chr5 130051964 130052361 -69577789 - L1ME LINE L1 -4834 1144 744 2051 104 7 36 chr5 130052827 130053134 -69577016 - THE1A LTR MaLR -3 352 55 11489 100 5 1 chr5 130053134 130054689 -69575461 - THE1A-int LTR MaLR -20 1560 1 2748 78 6 0 chr5 130054689 130055036 -69575114 - THE1A LTR MaLR 0 355 7 245 258 61 39 chr5 130055337 130055506 -69574644 - L1ME LINE L1 -5896 174 1 23 33 0 0 chr5 130056510 130056540 -69573610 + AT_rich Low_complexity Low_complexity 1 30 0 350 232 61 10 chr5 130057992 130058091 -69572059 - MER103 DNA DNA -60 106 3 189 74 0 0 chr5 130058092 130058119 -69572031 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2039 243 46 3 chr5 130058166 130058734 -69571416 - L1M4b LINE L1 -1533 5424 4833 * 4545 244 68 47 chr5 130058731 130060251 -69569899 - L1M4b LINE L1 -2332 4625 3138 2728 186 20 2 chr5 130060251 130060751 -69569399 + LTR22 LTR ERVK 1 509 0 4545 244 68 47 chr5 130060751 130060991 -69569159 - L1M4b LINE L1 -3819 3138 2904 1881 162 3 3 chr5 130060991 130061288 -69568862 - AluSx SINE Alu -15 297 1 4545 244 68 47 chr5 130061288 130061413 -69568737 - L1M4b LINE L1 -4053 2904 2783 1765 38 0 0 chr5 130061413 130061623 -69568527 + L1PA3 LINE L1 5946 6155 0 4545 244 68 47 chr5 130061623 130061889 -69568261 - L1M4b LINE L1 -4174 2783 2476 1228 257 59 49 chr5 130062064 130062714 -69567436 - L1M4b LINE L1 -4563 2396 1747 42552 37 21 1 chr5 130062714 130068779 -69561371 - L1PA2 LINE L1 0 6155 2 4647 189 81 18 chr5 130068764 130069875 -69560275 - L1M4b LINE L1 -5088 1767 591 * 1395 142 100 14 chr5 130071753 130072034 -69558116 - L1MA9 LINE L1 -2 6310 6006 712 149 21 101 chr5 130072135 130072323 -69557827 - L1MA6 LINE L1 -4 6296 6124 262 256 26 26 chr5 130072324 130072441 -69557709 - L1M4 LINE L1 -3301 2845 2729 1199 175 51 64 chr5 130072610 130072957 -69557193 + MER67C LTR ERV1 1 373 -243 29 47 0 0 chr5 130073385 130073428 -69556722 + AT_rich Low_complexity Low_complexity 1 43 0 3208 157 39 9 chr5 130073553 130074088 -69556062 - MER21A LTR ERV1 -4 927 377 1495 121 81 16 chr5 130074094 130074342 -69555808 - MER21A LTR ERV1 -667 264 1 213 308 0 0 chr5 130074473 130074525 -69555625 - MER5A DNA MER1_type -7 182 131 367 279 10 0 chr5 130075091 130075195 -69554955 - MER103 DNA DNA -46 120 16 1297 76 92 0 chr5 130075333 130075518 -69554632 + MER30 DNA MER1_type 1 202 -28 306 280 213 27 chr5 130075526 130075676 -69554474 - MIR SINE MIR -54 208 31 1919 126 44 82 chr5 130076571 130076750 -69553400 + THE1C LTR MaLR 1 185 -190 1641 233 42 84 chr5 130076750 130077389 -69552761 - LTR9 LTR ERV1 0 612 1 1919 126 44 82 chr5 130077389 130077599 -69552551 + THE1C LTR MaLR 185 375 0 220 303 210 8 chr5 130077623 130077742 -69552408 + MIR SINE MIR 49 191 -71 2763 165 98 77 chr5 130078317 130078574 -69551576 + LTR48 LTR ERV1 4 254 -533 2468 75 0 0 chr5 130078574 130078880 -69551270 + AluSg SINE Alu 1 306 -4 2763 165 98 77 chr5 130078880 130079390 -69550760 + LTR48 LTR ERV1 254 787 0 261 0 0 0 chr5 130079983 130080012 -69550138 + (TG)n Simple_repeat Simple_repeat 2 30 0 446 298 132 18 chr5 130080337 130080565 -69549585 + MIR SINE MIR 9 262 0 234 224 79 0 chr5 130081085 130081161 -69548989 + LTR68 LTR ERV1 13 94 -646 5025 126 30 4 chr5 130081161 130081992 -69548158 - L1PB4 LINE L1 -8 6148 5296 2658 185 26 19 chr5 130082008 130082203 -69547947 - L1PB4 LINE L1 -1510 4636 4444 4483 149 18 40 chr5 130082203 130083004 -69547146 + LTR39 LTR ERV1 1 783 0 2658 185 26 19 chr5 130083004 130083385 -69546765 - L1PB4 LINE L1 -1702 4444 4056 29 0 0 0 chr5 130183710 130183739 -69446411 + AT_rich Low_complexity Low_complexity 1 29 0 481 319 34 19 chr5 130183817 130183926 -69446224 + L2 LINE L2 2946 3052 -261 2189 120 53 36 chr5 130183926 130184284 -69445866 - THE1B LTR MaLR 0 364 1 12879 83 6 8 chr5 130184284 130185866 -69444284 - THE1B-int LTR MaLR 0 1580 1 2384 124 48 22 chr5 130185866 130186221 -69443929 - THE1B LTR MaLR 0 364 1 481 319 34 19 chr5 130186221 130186316 -69443834 + L2 LINE L2 3051 3155 -158 29 47 0 0 chr5 130186356 130186399 -69443751 + AT_rich Low_complexity Low_complexity 1 43 0 311 274 111 35 chr5 130186402 130186669 -69443481 - L1MC4a LINE L1 -268 5896 5612 22 0 0 0 chr5 130289497 130289519 -69340631 + AT_rich Low_complexity Low_complexity 1 22 0 339 169 34 34 chr5 130290019 130290167 -69339983 + (TA)n Simple_repeat Simple_repeat 1 148 0 533 63 89 0 chr5 130290604 130290683 -69339467 - L1MA8 LINE L1 -79 6212 6127 * 6416 31 5 0 chr5 130290660 130291432 -69338718 + L1PA4 LINE L1 5375 6150 -5 2416 111 22 36 chr5 130291428 130291843 -69338307 - L1MA8 LINE L1 -152 6139 5731 * 417 152 0 0 chr5 130291843 130291910 -69338240 + L1MA8 LINE L1 6203 6281 -10 5030 150 15 0 chr5 130291980 130292829 -69337321 - L1PA11 LINE L1 -1435 4711 3850 6224 94 21 9 chr5 130292834 130294277 -69335873 + L1PA11 LINE L1 4712 6172 -2 416 273 52 63 chr5 130294937 130295223 -69334927 - HAL1 LINE L1 0 2507 2225 595 289 116 0 chr5 130295735 130295960 -69334190 - HAL1 LINE L1 -625 1882 1632 2583 129 6 11 chr5 130295996 130296604 -69333546 + L1M2 LINE L1 5057 5664 -627 592 228 142 64 chr5 130296730 130296963 -69333187 - MIR SINE MIR 0 262 12 201 39 0 0 chr5 130297409 130297435 -69332715 + (CA)n Simple_repeat Simple_repeat 1 26 0 300 300 48 56 chr5 130297704 130298257 -69331893 + L1MC/D LINE L1 5067 5623 -745 1929 194 53 8 chr5 130298401 130298777 -69331373 + MSTD LTR MaLR 4 396 0 815 41 0 0 chr5 130298965 130299062 -69331088 - AluY SINE Alu -12 299 203 311 278 108 57 chr5 130299291 130299503 -69330647 + HAL1 LINE L1 4 226 -2281 216 82 41 20 chr5 130299746 130299795 -69330355 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 240 86 0 0 chr5 130300045 130300080 -69330070 + (TA)n Simple_repeat Simple_repeat 1 35 0 238 321 77 26 chr5 130300109 130300458 -69329692 + HAL1 LINE L1 986 1352 -1155 375 345 59 32 chr5 130300544 130300764 -69329386 + HAL1 LINE L1 1512 1737 -770 22 56 0 0 chr5 130300905 130300941 -69329209 + AT_rich Low_complexity Low_complexity 1 36 0 318 227 0 0 chr5 130301268 130301343 -69328807 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 440 282 23 30 chr5 130301360 130301440 -69328710 + L1M4 LINE L1 4398 4477 -1669 7030 58 2 1 chr5 130301440 130302446 -69327704 + L1PA7 LINE L1 5148 6152 -2 440 282 23 30 chr5 130302446 130302575 -69327575 + L1M4 LINE L1 4477 4603 -1543 231 224 26 60 chr5 130302837 130302953 -69327197 + HAL1b LINE L1 747 858 -490 249 329 34 54 chr5 130303098 130303207 -69326943 + HAL1 LINE L1 2251 2358 -149 366 23 0 0 chr5 130303207 130303250 -69326900 + (CA)n Simple_repeat Simple_repeat 1 43 0 249 329 34 54 chr5 130303250 130303289 -69326861 + HAL1 LINE L1 2358 2396 -111 353 240 0 64 chr5 130303515 130303640 -69326510 - MIR SINE MIR -97 165 49 402 314 86 35 chr5 130303993 130304738 -69325412 + L1MC4a LINE L1 2205 2987 -3159 468 294 106 43 chr5 130304763 130305368 -69324782 + L1MC4a LINE L1 3296 3938 -2208 192 125 0 0 chr5 130305448 130305480 -69324670 + (CA)n Simple_repeat Simple_repeat 1 32 0 627 152 15 8 chr5 130305593 130305725 -69324425 + GA-rich Low_complexity Low_complexity 4 136 0 211 307 23 34 chr5 130305746 130305834 -69324316 + (CAGAGA)n Simple_repeat Simple_repeat 5 91 0 271 306 116 32 chr5 130305836 130306268 -69323882 + L1MC4a LINE L1 4014 4481 -1665 257 267 82 14 chr5 130306540 130306686 -69323464 + L1MC4a LINE L1 4897 5052 -1094 6229 95 28 1 chr5 130306768 130307654 -69322496 - L1PA13 LINE L1 0 6163 5254 2593 162 4 0 chr5 130307666 130308136 -69322014 + L1PA13 LINE L1 4777 5248 -898 1319 268 78 83 chr5 130308155 130308748 -69321402 + L1MC4a LINE L1 5187 5782 -364 1008 139 82 0 chr5 130308748 130308942 -69321208 + L1MA8 LINE L1 6077 6286 -5 1319 268 78 83 chr5 130308942 130309376 -69320774 + L1MC4a LINE L1 5782 5230 -916 1704 189 17 3 chr5 130309376 130309678 -69320472 + AluJo SINE Alu 1 306 -6 1319 268 78 83 chr5 130309678 130309772 -69320378 + L1MC4a LINE L1 5229 5322 -824 1791 178 56 13 chr5 130309838 130310194 -69319956 + MLT1A1 LTR MaLR 1 426 -2 2570 259 96 17 chr5 130310269 130311214 -69318936 + L1MC4a LINE L1 6429 7448 -360 1036 167 0 0 chr5 130311239 130311413 -69318737 + FRAM SINE Alu 1 173 -3 536 239 121 42 chr5 130311495 130311573 -69318577 + L1MC4 LINE L1 7728 7798 -244 1709 153 33 0 chr5 130311573 130311872 -69318278 + AluJb SINE Alu 1 308 0 536 239 121 42 chr5 130311872 130312081 -69318069 + L1MC4 LINE L1 7798 8039 -3 298 375 62 6 chr5 130312255 130312415 -69317735 + MIR3 SINE MIR 20 188 -20 2049 122 7 0 chr5 130312866 130313160 -69316990 + AluSq SINE Alu 1 296 -17 724 245 0 12 chr5 130313865 130314028 -69316122 - FRAM SINE Alu -4 162 2 3292 260 95 64 chr5 130315345 130315605 -69314545 + HAL1 LINE L1 8 258 -2249 1602 176 51 20 chr5 130315605 130315900 -69314250 + AluJo SINE Alu 6 309 -3 3292 260 95 64 chr5 130315900 130317349 -69312801 + HAL1 LINE L1 258 1770 -737 481 315 77 49 chr5 130317387 130317819 -69312331 - MLT1J2 LTR MaLR 0 450 36 768 176 0 15 chr5 130318262 130318398 -69311752 + AluJb SINE Alu 170 303 -9 386 218 335 12 chr5 130318512 130318682 -69311468 + L1MC/D LINE L1 5597 5821 -1987 189 307 13 13 chr5 130319363 130319438 -69310712 + MIR SINE MIR 80 154 -108 2153 111 0 7 chr5 130320709 130321016 -69309134 + AluSc SINE Alu 1 305 -4 25 0 0 0 chr5 130321453 130321478 -69308672 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 130322713 130322741 -69307409 + AT_rich Low_complexity Low_complexity 1 28 0 215 71 91 30 chr5 130323011 130323110 -69307040 + (TATAA)n Simple_repeat Simple_repeat 5 109 0 337 325 42 22 chr5 130323236 130323547 -69306603 - L1ME4a LINE L1 -265 5856 5540 615 268 66 25 chr5 130323919 130324117 -69306033 + MER115 DNA AcHobo 54 259 -434 1455 268 75 0 chr5 130324414 130324802 -69305348 + MER69 DNA AcHobo 369 785 -1741 414 315 41 34 chr5 130324811 130325103 -69305047 + L1M3b LINE L1 1216 1509 -5987 1145 113 28 0 chr5 130325675 130325852 -69304298 + L1MA4 LINE L1 6079 6260 -40 12239 220 42 39 chr5 130325936 130327548 -69302602 + L1M3b LINE L1 2097 3702 -3863 1934 107 22 0 chr5 130327548 130327840 -69302310 - AluY SINE Alu 0 300 3 12239 220 42 39 chr5 130327840 130330877 -69299273 + L1M3b LINE L1 3702 6672 -893 7169 43 5 6 chr5 130330877 130331802 -69298348 + L1PA5 LINE L1 5254 6154 0 941 199 28 0 chr5 130331813 130331989 -69298161 - MER5A DNA MER1_type -8 181 1 215 379 29 0 chr5 130334640 130334743 -69295407 + MIR3 SINE MIR 91 196 -12 505 310 71 5 chr5 130334841 130335025 -69295125 + MIR SINE MIR 8 203 -59 274 350 86 0 chr5 130337911 130338028 -69292122 - L2 LINE L2 0 3313 3187 527 181 309 58 chr5 130338241 130338500 -69291650 - MER5C DNA MER1_type 0 324 1 23 0 0 0 chr5 130338863 130338886 -69291264 + AT_rich Low_complexity Low_complexity 1 23 0 312 296 28 9 chr5 130341362 130341470 -69288680 + MIR SINE MIR 44 153 -109 277 215 0 15 chr5 130341473 130341538 -69288612 + L2 LINE L2 3250 3313 0 1522 162 85 15 chr5 130341841 130342113 -69288037 + AluJo SINE Alu 6 296 -16 1828 146 23 26 chr5 130343063 130343365 -69286785 + AluSx SINE Alu 1 301 -11 364 243 59 52 chr5 130343620 130343756 -69286394 + MIR SINE MIR 20 156 -106 358 192 20 71 chr5 130343965 130344064 -69286086 - LTR68 LTR ERV1 -390 350 257 2633 185 26 19 chr5 130344174 130344555 -69285595 + L1PB4 LINE L1 4056 4444 -1702 4511 149 18 40 chr5 130344555 130345356 -69284794 - LTR39 LTR ERV1 0 783 1 2633 185 26 19 chr5 130345356 130345551 -69284599 + L1PB4 LINE L1 4444 4636 -1510 5025 126 30 4 chr5 130345567 130346398 -69283752 + L1PB4 LINE L1 5296 6148 -8 234 224 79 0 chr5 130346398 130346474 -69283676 - LTR68 LTR ERV1 -646 94 13 446 298 132 18 chr5 130346994 130347222 -69282928 - MIR SINE MIR 0 262 9 279 0 0 0 chr5 130347547 130347578 -69282572 + (CA)n Simple_repeat Simple_repeat 2 32 0 2763 165 98 77 chr5 130348171 130348681 -69281469 - LTR48 LTR ERV1 0 787 254 2468 75 0 0 chr5 130348681 130348987 -69281163 - AluSg SINE Alu -4 306 1 2763 165 98 77 chr5 130348987 130349244 -69280906 - LTR48 LTR ERV1 -533 254 4 220 303 210 8 chr5 130349819 130349938 -69280212 - MIR SINE MIR -71 191 49 1919 126 44 82 chr5 130349962 130350172 -69279978 - THE1C LTR MaLR 0 375 185 1641 233 42 84 chr5 130350172 130350811 -69279339 + LTR9 LTR ERV1 1 612 0 1919 126 44 82 chr5 130350811 130350990 -69279160 - THE1C LTR MaLR -190 185 1 306 280 213 27 chr5 130351885 130352035 -69278115 + MIR SINE MIR 31 208 -54 1297 76 92 0 chr5 130352043 130352228 -69277922 - MER30 DNA MER1_type -28 202 1 367 279 10 0 chr5 130352366 130352470 -69277680 + MER103 DNA DNA 16 120 -46 213 308 0 0 chr5 130353036 130353088 -69277062 + MER5A DNA MER1_type 131 182 -7 1495 121 81 16 chr5 130353219 130353467 -69276683 + MER21A LTR ERV1 1 264 -667 3208 157 39 9 chr5 130353473 130354008 -69276142 + MER21A LTR ERV1 377 927 -4 29 47 0 0 chr5 130354133 130354176 -69275974 + AT_rich Low_complexity Low_complexity 1 43 0 1199 175 51 64 chr5 130354604 130354951 -69275199 - MER67C LTR ERV1 -243 271 1 262 256 26 26 chr5 130355120 130355237 -69274913 + L1M4 LINE L1 2729 2845 -3301 712 149 21 101 chr5 130355238 130355426 -69274724 + L1MA6 LINE L1 6124 6296 -4 1395 142 100 14 chr5 130355527 130355808 -69274342 + L1MA9 LINE L1 6006 6310 -2 4647 189 81 18 chr5 130357686 130358797 -69271353 + L1M4b LINE L1 591 1767 -5088 * 36701 41 28 1 chr5 130358782 130363363 -69266787 + L1P LINE L1 2 4705 -1441 1355 243 8 45 chr5 130363439 130363772 -69266378 - MLT1A1 LTR MaLR 0 365 46 2114 111 7 7 chr5 130363772 130364069 -69266081 - AluSx SINE Alu -15 297 1 1355 243 8 45 chr5 130364069 130364113 -69266037 - MLT1A1 LTR MaLR -319 46 2 1110 281 74 28 chr5 130364504 130365042 -69265108 + L1ME3A LINE L1 5302 5864 -306 23 54 0 0 chr5 130365076 130365113 -69265037 + AT_rich Low_complexity Low_complexity 1 37 0 959 194 50 6 chr5 130365591 130365771 -69264379 - MER5A DNA MER1_type -1 188 1 283 284 223 20 chr5 130365803 130365951 -69264199 + MIR3 SINE MIR 20 197 -11 522 151 0 0 chr5 130367387 130367493 -69262657 + (TG)n Simple_repeat Simple_repeat 2 107 0 22 35 0 0 chr5 130367993 130368022 -69262128 + AT_rich Low_complexity Low_complexity 1 29 0 715 152 0 0 chr5 130368026 130368158 -69261992 - L1MA4 LINE L1 -6 6294 6163 180 279 16 101 chr5 130368352 130368481 -69261669 - MIR SINE MIR -72 190 73 22 56 0 0 chr5 130369170 130369206 -69260944 + AT_rich Low_complexity Low_complexity 1 36 0 207 130 0 43 chr5 130369475 130369521 -69260629 + (GAAAA)n Simple_repeat Simple_repeat 1 44 0 405 268 77 72 chr5 130370966 130371252 -69258898 + HAL1 LINE L1 822 1112 -1395 2227 91 0 20 chr5 130371252 130371550 -69258600 + AluY SINE Alu 1 292 -19 405 268 77 72 chr5 130371550 130371625 -69258525 + HAL1 LINE L1 1112 1185 -1322 339 232 89 0 chr5 130371791 130371903 -69258247 - L1M4 LINE L1 -3528 2618 2497 1010 214 16 8 chr5 130371992 130372240 -69257910 + L1 LINE L1 4667 4916 -1230 28730 94 8 3 chr5 130372248 130372904 -69257246 + L1PA7 LINE L1 1178 1829 -4325 1625 98 0 19 chr5 130372904 130373119 -69257031 - AluY SINE Alu -20 291 81 28730 94 8 3 chr5 130373119 130377399 -69252751 + L1PA7 LINE L1 1829 6143 -11 363 23 0 0 chr5 130377399 130377443 -69252707 + (CATA)n Simple_repeat Simple_repeat 2 45 0 28730 94 8 3 chr5 130377443 130377456 -69252694 + L1PA7 LINE L1 6143 6154 0 34 79 0 0 chr5 130377570 130377646 -69252504 + AT_rich Low_complexity Low_complexity 1 76 0 218 252 291 19 chr5 130379118 130379221 -69250929 + MIR SINE MIR 127 257 -5 242 95 24 0 chr5 130379842 130379884 -69250266 + (CA)n Simple_repeat Simple_repeat 1 43 0 624 342 118 21 chr5 130380358 130380893 -69249257 + L2 LINE L2 189 775 -2539 563 311 227 30 chr5 130380899 130381542 -69248608 + L2 LINE L2 1331 2100 -1214 3093 136 8 14 chr5 130381561 130381665 -69248485 - L1PA16 LINE L1 -2 6164 6061 2445 147 63 11 chr5 130381665 130382127 -69248023 + MER66B LTR ERV1 1 486 0 3093 136 8 14 chr5 130382127 130382522 -69247628 - L1PA16 LINE L1 -105 6061 5668 603 320 116 38 chr5 130382526 130382976 -69247174 + L2 LINE L2 2466 2950 -364 1000 287 65 0 chr5 130383022 130383283 -69246867 - LTR16A LTR ERVL -3 447 170 308 331 83 18 chr5 130383503 130383672 -69246478 + L2 LINE L2 3132 3311 -2 1923 126 0 0 chr5 130383947 130384201 -69245949 + AluSx SINE Alu 7 260 -52 14743 52 2 1 chr5 130384201 130387458 -69242692 + L1PA5 LINE L1 2894 6154 0 1134 303 76 34 chr5 130387675 130388441 -69241709 + HAL1 LINE L1 13 810 -1697 756 286 31 31 chr5 130388558 130389016 -69241134 + L1M4 LINE L1 4523 4980 -1166 862 332 21 25 chr5 130389028 130389510 -69240640 + L1ME LINE L1 68 547 -5523 2410 182 37 22 chr5 130389526 130390016 -69240134 - MER89-int LTR ERV1 -90 6711 6215 1354 142 42 45 chr5 130390018 130390327 -69239823 - MER89-int LTR ERV1 -4833 1968 1661 180 0 0 0 chr5 130390414 130390434 -69239716 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 422 177 21 10 chr5 130390506 130390602 -69239548 - MER89 LTR ERV1 -462 97 1 2777 18 0 0 chr5 130390757 130391085 -69239065 - L1PA2 LINE L1 -331 5824 5497 2926 23 9 0 chr5 130391085 130391426 -69238724 + L1PA2 LINE L1 5807 6155 0 5262 108 20 13 chr5 130391506 130392134 -69238016 - L1MA2 LINE L1 0 6304 5667 2485 88 0 0 chr5 130392134 130392442 -69237708 - AluSc SINE Alu -1 308 1 5262 108 20 13 chr5 130392442 130392662 -69237488 - L1MA2 LINE L1 -637 5667 5450 15165 162 22 19 chr5 130392662 130392825 -69237325 - L1 LINE L1 -3111 4454 4293 7704 22 2 2 chr5 130392825 130394107 -69236043 - L1PA3 LINE L1 -1 6154 4875 15165 162 22 19 chr5 130394107 130394592 -69235558 - L1 LINE L1 -3272 4293 3811 2196 96 10 0 chr5 130394592 130394884 -69235266 + AluY SINE Alu 1 295 -16 15165 162 22 19 chr5 130394884 130397650 -69232500 - L1 LINE L1 -3754 3811 1032 5492 70 3 1 chr5 130397651 130398338 -69231812 + LTR12 LTR ERV1 1 688 0 21306 96 16 6 chr5 130398338 130401446 -69228704 + HERV9 LTR ERV1 1 3139 -5260 30163 85 9 9 chr5 130401453 130402324 -69227826 + HERV9 LTR ERV1 4080 4949 -3450 2155 116 3 34 chr5 130402324 130402644 -69227506 + AluSg SINE Alu 1 310 0 30163 85 9 9 chr5 130402644 130406091 -69224059 + HERV9 LTR ERV1 4949 8399 0 5212 65 41 1 chr5 130406092 130406752 -69223398 + LTR12 LTR ERV1 2 687 -1 4816 182 58 20 chr5 130406752 130407067 -69223083 - L1 LINE L1 -6530 1035 733 186 43 0 0 chr5 130407067 130407090 -69223060 + (TCTCC)n Simple_repeat Simple_repeat 4 26 0 4816 182 58 20 chr5 130407090 130407465 -69222685 - L1 LINE L1 -6832 733 295 2499 154 62 10 chr5 130407465 130407951 -69222199 - MER9 LTR ERVK 0 511 1 4816 182 58 20 chr5 130407951 130408243 -69221907 - L1 LINE L1 -7270 295 15 243 61 0 0 chr5 130409863 130409896 -69220254 + (CA)n Simple_repeat Simple_repeat 2 34 0 2498 54 0 3 chr5 130409930 130410227 -69219923 - AluY SINE Alu -15 296 1 1226 220 45 58 chr5 130410448 130410969 -69219181 - MER67C LTR ERV1 -33 481 1 457 298 38 57 chr5 130411037 130411302 -69218848 - MER67C-int LTR ERV1 -111 4825 4566 512 191 18 9 chr5 130411582 130411692 -69218458 - MER67C-int LTR ERV1 -467 4469 4359 241 181 42 42 chr5 130411752 130411824 -69218326 - LTR37A LTR ERV1 -309 117 46 2480 83 0 11 chr5 130411837 130412185 -69217965 - L1PA13 LINE L1 -6 6157 5814 2250 215 19 28 chr5 130412186 130412721 -69217429 - MER67C-int LTR ERV1 -701 4235 3706 1044 247 68 19 chr5 130412722 130413090 -69217060 - MER66A LTR ERV1 0 478 93 257 56 0 0 chr5 130413130 130413166 -69216984 + MER31-int LTR ERV1 3673 3708 -1228 1734 231 48 64 chr5 130413355 130414043 -69216107 - MER67C-int LTR ERV1 -1887 3049 2373 202 409 45 0 chr5 130414617 130414705 -69215445 + MIR SINE MIR 7 98 -164 979 236 23 0 chr5 130414743 130414959 -69215191 - MIR SINE MIR -29 233 13 21 36 0 0 chr5 130415194 130415222 -69214928 + AT_rich Low_complexity Low_complexity 1 28 0 1856 88 0 0 chr5 130417428 130417656 -69212494 + AluSc SINE Alu 1 228 -81 235 26 0 0 chr5 130417657 130417695 -69212455 + AluSc SINE Alu 269 306 -2 2465 188 45 18 chr5 130418467 130418973 -69211177 - MLT2B1 LTR ERVL 0 520 1 464 200 61 17 chr5 130419378 130419493 -69210657 + L2 LINE L2 3190 3309 -4 1893 147 17 33 chr5 130419767 130420128 -69210022 - L1MB1 LINE L1 -5 6163 5809 36 40 0 0 chr5 130420231 130420281 -69209869 + AT_rich Low_complexity Low_complexity 1 50 0 310 303 35 28 chr5 130420338 130420483 -69209667 - MIR SINE MIR 0 262 117 410 69 0 0 chr5 130420810 130420868 -69209282 + L1PA6 LINE L1 6097 6154 0 21 36 0 0 chr5 130420945 130420973 -69209177 + AT_rich Low_complexity Low_complexity 1 28 0 421 198 0 10 chr5 130420979 130421075 -69209075 - L1MA10 LINE L1 -64 6270 6176 240 184 0 0 chr5 130421075 130421124 -69209026 + (TG)n Simple_repeat Simple_repeat 2 50 0 22 35 0 0 chr5 130421218 130421247 -69208903 + AT_rich Low_complexity Low_complexity 1 29 0 214 329 14 0 chr5 130421308 130421381 -69208769 - MER5C DNA MER1_type -249 75 2 33 25 0 0 chr5 130422490 130422530 -69207620 + AT_rich Low_complexity Low_complexity 1 40 0 634 191 7 0 chr5 130422887 130423023 -69207127 + L1MA8 LINE L1 6154 6290 -1 4098 177 14 4 chr5 130425375 130426204 -69203946 - L1MA5 LINE L1 0 6300 5463 307 105 0 35 chr5 130426204 130426261 -69203889 - MLT2A1 LTR ERVL 0 444 390 429 134 41 28 chr5 130426269 130426520 -69203630 + (CATATA)n Simple_repeat Simple_repeat 1 254 0 325 140 21 86 chr5 130426523 130426616 -69203534 - L1MC4 LINE L1 -1343 6699 6613 439 154 15 129 chr5 130426631 130426832 -69203318 + (TATATG)n Simple_repeat Simple_repeat 2 179 0 306 265 66 0 chr5 130426808 130426974 -69203176 + (TA)n Simple_repeat Simple_repeat 1 177 0 * 197 138 5 122 chr5 130426978 130427174 -69202976 + (TATATG)n Simple_repeat Simple_repeat 4 176 0 334 184 15 122 chr5 130427219 130427415 -69202735 + (TATATG)n Simple_repeat Simple_repeat 2 176 0 2897 76 13 0 chr5 130427421 130427814 -69202336 - MLT2A1 LTR ERVL -45 399 2 1212 137 49 27 chr5 130427814 130428181 -69201969 - L1MA5 LINE L1 -743 5403 5082 1205 245 21 19 chr5 130428173 130428588 -69201562 - L1 LINE L1 -2816 4032 3614 * 2440 185 22 0 chr5 130428588 130429005 -69201145 - MSTB LTR MaLR 0 426 1 1205 245 21 19 chr5 130429005 130429070 -69201080 - L1 LINE L1 -3234 3614 3551 7004 58 4 7 chr5 130429077 130430370 -69199780 - L1PA7 LINE L1 0 6154 4861 2616 97 3 0 chr5 130430371 130430741 -69199409 - L1P3 LINE L1 -6090 371 1 6341 219 113 82 chr5 130430764 130431371 -69198779 - L1 LINE L1 -3323 3525 2938 2478 67 0 0 chr5 130431371 130431671 -69198479 + AluY SINE Alu 1 300 -11 6341 219 113 82 chr5 130431671 130434478 -69195672 - L1 LINE L1 -3910 2938 7 307 306 18 42 chr5 130434765 130435095 -69195055 - L1M4 LINE L1 -967 5179 4858 313 324 0 9 chr5 130435144 130435252 -69194898 + CT-rich Low_complexity Low_complexity 2 108 0 409 284 71 50 chr5 130435257 130435862 -69194288 - L1M4 LINE L1 -1438 4708 4076 22 0 0 0 chr5 130435862 130435884 -69194266 + AT_rich Low_complexity Low_complexity 1 22 0 211 218 0 26 chr5 130436010 130436088 -69194062 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 661 294 31 36 chr5 130436106 130436524 -69193626 - L1MC4 LINE L1 -139 7903 7488 1042 246 140 41 chr5 130436530 130437043 -69193107 - L1MC4 LINE L1 -724 7318 6755 274 278 74 19 chr5 130437222 130437384 -69192766 - L1MC4a LINE L1 -1542 6266 6096 1326 259 113 23 chr5 130437937 130438505 -69191645 + L1MC4a LINE L1 5405 6023 -1785 302 308 60 22 chr5 130438499 130438684 -69191466 - L1M4 LINE L1 -2060 4086 3895 * 257 280 0 0 chr5 130438686 130438779 -69191371 - L1M4 LINE L1 -2352 3794 3702 396 284 0 0 chr5 130438811 130438913 -69191237 - L1MEc LINE L1 -5889 507 406 283 77 0 0 chr5 130438911 130438950 -69191200 - L1MB1 LINE L1 -10 6158 6120 * 1592 111 17 4 chr5 130439117 130439352 -69190798 - L1PA8A LINE L1 0 6131 5894 21734 158 9 18 chr5 130439352 130443458 -69186692 - L1P3 LINE L1 -1402 5059 981 324 296 0 11 chr5 130443602 130443690 -69186460 + MER5A DNA MER1_type 100 186 -3 262 380 65 0 chr5 130444179 130444287 -69185863 - L2 LINE L2 -33 3239 3125 805 152 0 0 chr5 130444306 130444431 -69185719 - AluSg/x SINE Alu -11 299 175 251 282 72 111 chr5 130444723 130444904 -69185246 + MLT1K LTR MaLR 207 380 -208 2413 165 19 25 chr5 130445423 130445638 -69184512 - MSTC LTR MaLR 0 428 216 2238 57 47 17 chr5 130445638 130445936 -69184214 - AluY SINE Alu -4 307 1 2413 165 19 25 chr5 130445936 130446151 -69183999 - MSTC LTR MaLR -212 216 1 243 217 50 0 chr5 130446212 130446272 -69183878 + MIR SINE MIR 126 188 -74 1973 193 16 32 chr5 130449110 130449483 -69180667 - L1MD3 LINE L1 -30 7965 7598 3398 112 4 0 chr5 130449483 130450000 -69180150 - L1PA13 LINE L1 -1 6162 5644 1973 193 16 32 chr5 130450000 130450061 -69180089 - L1MD3 LINE L1 -397 7598 7538 702 267 107 35 chr5 130450049 130450719 -69179431 + L1M4 LINE L1 4808 5508 -666 * 482 262 41 57 chr5 130451288 130451497 -69178653 + MIR SINE MIR 50 255 -7 2021 119 31 64 chr5 130451506 130451866 -69178284 + MER7A DNA MER2_type 1 346 0 233 194 0 16 chr5 130451880 130451942 -69178208 + GA-rich Low_complexity Low_complexity 3 63 0 31 0 0 0 chr5 130453024 130453055 -69177095 + AT_rich Low_complexity Low_complexity 1 31 0 1543 110 3 120 chr5 130453571 130453698 -69176452 + AluY SINE Alu 22 94 -217 2765 25 18 0 chr5 130453698 130454024 -69176126 + L1PA2 LINE L1 5820 6151 -4 1543 110 3 120 chr5 130454024 130454205 -69175945 + AluY SINE Alu 94 294 -17 24 0 0 0 chr5 130454479 130454503 -69175647 + AT_rich Low_complexity Low_complexity 1 24 0 1045 127 4 181 chr5 130454556 130454815 -69175335 - MER20 DNA MER1_type -5 214 2 809 285 70 27 chr5 130454851 130455296 -69174854 - L1ME LINE L1 -399 5771 5308 312 119 0 12 chr5 130455297 130455357 -69174793 - Alu SINE Alu -10 290 244 331 219 10 0 chr5 130455362 130455458 -69174692 - L1MA7 LINE L1 -1 6290 6194 14937 37 6 1 chr5 130455699 130458295 -69171855 - L1PA5 LINE L1 -7 6147 3544 1912 239 85 27 chr5 130458310 130458424 -69171726 - L1ME1 LINE L1 -6 6160 6054 2018 126 0 4 chr5 130458424 130458702 -69171448 + AluSg SINE Alu 1 277 -33 216 0 0 0 chr5 130458703 130458727 -69171423 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 237 33 0 0 chr5 130458726 130458756 -69171394 + (CA)n Simple_repeat Simple_repeat 1 30 0 1912 239 85 27 chr5 130458727 130459313 -69170837 - L1ME1 LINE L1 -111 6055 5448 2443 78 0 0 chr5 130459897 130460204 -69169946 + AluY SINE Alu 1 307 -4 23 54 0 0 chr5 130460233 130460270 -69169880 + AT_rich Low_complexity Low_complexity 1 37 0 210 71 0 0 chr5 130460560 130460588 -69169562 + (CG)n Simple_repeat Simple_repeat 2 29 0 * 234 0 0 0 chr5 130460587 130460613 -69169537 + (CA)n Simple_repeat Simple_repeat 1 26 0 14856 216 45 17 chr5 130461199 130466798 -69163352 - L1PA15 LINE L1 0 7603 1837 4291 150 32 4 chr5 130466799 130467491 -69162659 - MER50 LTR ERV1 -23 711 1 556 309 116 41 chr5 130467547 130468010 -69162140 - L1PA12 LINE L1 -5502 2079 1607 434 252 0 97 chr5 130468032 130468238 -69161912 - L1PA15 LINE L1 -5846 1735 1550 784 223 119 88 chr5 130468867 130468914 -69161236 - MER66A LTR ERV1 -16 462 418 2599 136 24 0 chr5 130468914 130469332 -69160818 + MSTA LTR MaLR 1 428 0 784 223 119 88 chr5 130469332 130469779 -69160371 - MER66A LTR ERV1 -60 418 97 490 94 0 0 chr5 130469780 130469844 -69160306 - MER66A-int LTR ERV1 -5 6671 6608 1108 197 74 130 chr5 130469951 130470234 -69159916 - MER66A LTR ERV1 0 478 309 1916 120 0 0 chr5 130470234 130470500 -69159650 - AluSc SINE Alu -9 300 35 1108 197 74 130 chr5 130470500 130470702 -69159448 - MER66A LTR ERV1 -169 309 97 279 0 0 0 chr5 130470793 130470824 -69159326 + (CA)n Simple_repeat Simple_repeat 2 32 0 580 211 89 47 chr5 130470827 130471040 -69159110 + L1ME3A LINE L1 5948 6169 -1 900 209 12 39 chr5 130471081 130471335 -69158815 - L1MA9 LINE L1 -38 6274 6028 21 0 0 0 chr5 130471414 130471435 -69158715 + AT_rich Low_complexity Low_complexity 1 21 0 2548 196 2 9 chr5 130471740 130472203 -69157947 - MER66B LTR ERV1 0 486 27 598 223 141 35 chr5 130472558 130472908 -69157242 + L1M4 LINE L1 4995 5386 -798 213 94 0 0 chr5 130472908 130472940 -69157210 + (CA)n Simple_repeat Simple_repeat 1 32 0 598 223 141 35 chr5 130472940 130472997 -69157153 + L1M4 LINE L1 5386 5436 -748 457 311 87 5 chr5 130473001 130473207 -69156943 + L2 LINE L2 1799 2021 -1293 781 324 97 15 chr5 130473211 130473603 -69156547 + L2 LINE L2 2239 2662 -652 581 344 18 3 chr5 130474582 130474864 -69155286 + HERVI LTR ERV1 718 1003 -6782 4203 323 42 44 chr5 130475055 130479452 -69150698 + HERVI LTR ERV1 954 5757 -2028 361 260 24 24 chr5 130479666 130479789 -69150361 + HERVI LTR ERV1 3031 4857 -1792 1447 319 41 41 chr5 130480198 130481399 -69148751 + HERVI LTR ERV1 3365 7647 -138 391 324 112 73 chr5 130482034 130482659 -69147491 + L2 LINE L2 2657 3299 -14 396 0 0 0 chr5 130482923 130482967 -69147183 + (TG)n Simple_repeat Simple_repeat 2 45 0 2404 84 0 0 chr5 130482970 130483267 -69146883 - AluY SINE Alu -14 297 1 897 201 4 29 chr5 130484909 130485188 -69144962 - L1MB8 LINE L1 -3 6175 5926 790 215 13 0 chr5 130485198 130485356 -69144794 - L1MA6 LINE L1 -254 6046 5887 2180 120 3 0 chr5 130485356 130485656 -69144494 - AluSx SINE Alu -11 301 1 446 317 148 59 chr5 130485798 130486889 -69143261 + L2 LINE L2 2046 3256 -16 210 326 104 57 chr5 130487198 130487391 -69142759 + MIR SINE MIR 19 220 -42 2289 290 95 24 chr5 130487902 130488976 -69141174 + L2 LINE L2 2166 3309 -4 346 310 26 9 chr5 130489862 130489975 -69140175 + MIR SINE MIR 77 191 -71 4198 30 0 0 chr5 130490056 130490552 -69139598 + L1PA3 LINE L1 5660 6155 0 181 274 95 42 chr5 130491490 130491542 -69138608 + L2 LINE L2 2937 2985 -287 231 36 0 0 chr5 130491542 130491570 -69138580 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 2053 99 0 38 chr5 130491570 130491862 -69138288 - AluSp SINE Alu -32 281 1 181 274 95 42 chr5 130491862 130491903 -69138247 + L2 LINE L2 2984 3036 -236 1361 292 56 31 chr5 130494736 130495184 -69134966 - LTR16B LTR ERVL -2 462 4 2109 73 24 17 chr5 130495437 130495724 -69134426 - AluY SINE Alu -20 291 3 28 0 0 0 chr5 130496639 130496667 -69133483 + AT_rich Low_complexity Low_complexity 1 28 0 19191 51 6 19 chr5 130497581 130500908 -69129242 - L1PA5 LINE L1 -2 6152 2858 2498 58 0 0 chr5 130500908 130501236 -69128914 + L1PA5 LINE L1 2524 2851 -3295 1051 310 122 13 chr5 130501677 130502434 -69127716 + L2 LINE L2 2452 3313 0 451 265 98 65 chr5 130502852 130503097 -69127053 + MIR SINE MIR 4 256 -6 13719 237 29 19 chr5 130503969 130505046 -69125104 + L1P4 LINE L1 1798 2863 -4005 2343 79 0 7 chr5 130505046 130505349 -69124801 + AluY SINE Alu 1 301 -10 13719 237 29 19 chr5 130505349 130508685 -69121465 + L1P4 LINE L1 2863 6275 -593 27 0 0 0 chr5 130509117 130509144 -69121006 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr5 130509380 130509405 -69120745 + AT_rich Low_complexity Low_complexity 1 25 0 1409 141 39 0 chr5 130509698 130509932 -69120218 - L1PA16 LINE L1 -10 6156 5914 6486 60 1 1 chr5 130510254 130511069 -69119081 - L1PA7 LINE L1 -4 6150 5336 1095 72 52 0 chr5 130511068 130511221 -69118929 + L1P LINE L1 4235 4395 -1751 * 182 250 0 0 chr5 130511569 130511617 -69118533 + MIR SINE MIR 107 154 -108 521 361 79 4 chr5 130511645 130511886 -69118264 + MIR SINE MIR 4 262 0 201 402 11 0 chr5 130512410 130512502 -69117648 + L2 LINE L2 2532 2624 -690 285 167 0 0 chr5 130512747 130512795 -69117355 + MLT1J LTR MaLR 453 500 -11 386 338 29 34 chr5 130513453 130513660 -69116490 - MIR SINE MIR -13 249 44 495 282 61 2 chr5 130513717 130513871 -69116279 + MIR SINE MIR 32 191 -65 11008 177 51 13 chr5 130514572 130517699 -69112451 + L1MA8 LINE L1 3040 6290 -1 311 264 129 34 chr5 130518767 130518815 -69111335 - L1M4 LINE L1 -360 5818 5776 1050 226 128 10 chr5 130518815 130519121 -69111029 + MER2 DNA MER2_type 1 342 -2 311 264 129 34 chr5 130519121 130519250 -69110900 - L1M4 LINE L1 -402 5776 5624 352 267 24 33 chr5 130519345 130519356 -69110794 - L1MEd LINE L1 -5043 1076 1066 2369 74 0 3 chr5 130519356 130519653 -69110497 - AluY SINE Alu -15 296 1 352 267 24 33 chr5 130519653 130519851 -69110299 - L1MEd LINE L1 -5053 1066 869 605 187 0 0 chr5 130520771 130520878 -69109272 + AluSg/x SINE Alu 184 290 -22 2753 41 0 9 chr5 130522662 130523042 -69107108 + L1PA7 LINE L1 5806 6182 0 1654 215 84 23 chr5 130523739 130524213 -69105937 + MLT1D LTR MaLR 3 505 0 2505 70 0 3 chr5 130524366 130524678 -69105472 - AluY SINE Alu 0 311 1 212 296 139 26 chr5 130524971 130525086 -69105064 - L2 LINE L2 -2 3311 3184 1658 237 15 78 chr5 130525801 130526400 -69103750 - L1MC4a LINE L1 -1217 6591 6031 189 296 23 0 chr5 130526619 130526663 -69103487 - L2 LINE L2 -18 3254 3210 29 28 0 0 chr5 130526845 130526881 -69103269 + AT_rich Low_complexity Low_complexity 1 36 0 1607 219 174 25 chr5 130527413 130527824 -69102326 + MLT2B1 LTR ERVL 3 384 -30 300 27 0 0 chr5 130527824 130527861 -69102289 + (CA)n Simple_repeat Simple_repeat 2 38 0 1607 219 174 25 chr5 130527861 130527898 -69102252 + MLT2B1 LTR ERVL 384 414 0 17052 171 53 30 chr5 130528033 130530743 -69099407 - L1MA2 LINE L1 0 7723 5077 2103 113 0 32 chr5 130530743 130531052 -69099098 - AluSg SINE Alu -11 299 1 17052 171 53 30 chr5 130531052 130531860 -69098290 - L1MA2 LINE L1 -2646 5077 4289 1500 194 11 28 chr5 130531860 130532144 -69098006 + AluJb SINE Alu 3 281 -31 444 37 0 0 chr5 130532149 130532203 -69097947 + (TAAA)n Simple_repeat Simple_repeat 1 54 0 17052 171 53 30 chr5 130532203 130532748 -69097402 - L1MA2 LINE L1 -3437 4286 3755 2101 118 7 0 chr5 130532748 130533044 -69097106 - AluSx SINE Alu -14 298 1 17052 171 53 30 chr5 130533044 130536481 -69093669 - L1MA2 LINE L1 -3968 3755 19 360 335 71 7 chr5 130536481 130536636 -69093514 - MIR SINE MIR -80 182 18 694 279 105 51 chr5 130537422 130537737 -69092413 + L2 LINE L2 2966 3297 -16 2048 114 24 0 chr5 130537943 130538233 -69091917 - AluSg SINE Alu -13 297 1 302 261 87 53 chr5 130538262 130538469 -69091681 - L1M4 LINE L1 -3436 2710 2497 2203 190 38 18 chr5 130538575 130539074 -69091076 + L1MA9 LINE L1 5707 6215 -97 186 43 0 0 chr5 130539218 130539241 -69090909 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 277 362 22 7 chr5 130539518 130539656 -69090494 - MIR SINE MIR -65 197 58 2540 72 0 0 chr5 130540447 130540754 -69089396 - AluY SINE Alu -4 307 1 270 282 55 45 chr5 130541689 130541799 -69088351 - MIR SINE MIR -94 168 58 318 219 114 29 chr5 130542340 130542356 -69087794 - L1MA9 LINE L1 -21 6291 6276 1842 228 18 47 chr5 130542356 130542848 -69087302 - L1ME1 LINE L1 -45 6121 5644 261 156 0 0 chr5 130542849 130542894 -69087256 - L1ME1 LINE L1 -583 5583 5539 2690 144 33 4 chr5 130543165 130543617 -69086533 + L1MC1 LINE L1 5581 6045 -288 1200 252 31 0 chr5 130543636 130543957 -69086193 + L1PB2 LINE L1 3 333 -6530 12573 210 42 22 chr5 130543991 130546054 -69084096 + L1PB2 LINE L1 463 2484 -4383 2297 88 0 0 chr5 130546054 130546339 -69083811 + AluY SINE Alu 1 285 -26 194 0 39 0 chr5 130546342 130546368 -69083782 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 12573 210 42 22 chr5 130546368 130546571 -69083579 + L1PB2 LINE L1 2485 2683 -4184 2406 93 0 0 chr5 130546571 130546873 -69083277 - AluY SINE Alu -9 302 1 12573 210 42 22 chr5 130546873 130546988 -69083162 + L1PB2 LINE L1 2683 2794 -4073 2019 180 107 9 chr5 130546988 130547448 -69082702 + LTR22 LTR ERVK 1 505 -4 12573 210 42 22 chr5 130547448 130552295 -69077855 + L1PB2 LINE L1 2794 6865 -2 1491 152 53 11 chr5 130552307 130552590 -69077560 + L1MC1 LINE L1 6039 6333 0 457 118 109 0 chr5 130552629 130552739 -69077411 + MER69 DNA AcHobo 2308 2429 -97 1617 110 0 0 chr5 130552805 130553023 -69077127 + AluSg SINE Alu 1 218 -92 2025 98 0 0 chr5 130553023 130553277 -69076873 + AluSg SINE Alu 31 284 -26 5478 162 23 6 chr5 130553542 130554799 -69075351 - L1MA9 LINE L1 -6 6306 5031 3144 228 73 49 chr5 130554792 130556646 -69073504 - L1M2 LINE L1 -4360 2747 865 * 1257 206 99 7 chr5 130556655 130556947 -69073203 - L1M2 LINE L1 -6709 321 3 252 100 0 0 chr5 130557158 130557198 -69072952 + (TC)n Simple_repeat Simple_repeat 1 40 0 276 288 38 0 chr5 130557552 130557632 -69072518 - MIR3 SINE MIR -1 207 125 392 0 21 0 chr5 130557898 130557946 -69072204 + (TC)n Simple_repeat Simple_repeat 2 50 0 381 299 7 14 chr5 130558165 130558242 -69071908 + L1ME3A LINE L1 6020 6097 -73 1616 100 32 4 chr5 130558242 130558492 -69071658 + L1PA13 LINE L1 5902 6158 -5 381 299 7 14 chr5 130558492 130558561 -69071589 + L1ME3A LINE L1 6097 6165 -5 256 269 39 19 chr5 130558823 130558927 -69071223 + L1MC4a LINE L1 5814 5919 -1889 208 147 0 0 chr5 130559255 130559289 -69070861 + (T)n Simple_repeat Simple_repeat 1 34 0 2123 101 7 7 chr5 130559322 130559609 -69070541 - AluSc SINE Alu -20 289 3 199 162 68 7 chr5 130559660 130559808 -69070342 + (TA)n Simple_repeat Simple_repeat 2 158 0 5375 137 26 7 chr5 130559842 130561041 -69069109 - L1PA16 LINE L1 -9 6157 4941 2063 142 47 36 chr5 130562422 130562782 -69067368 - THE1B LTR MaLR 0 364 1 9819 84 4 162 chr5 130562782 130564657 -69065493 - THE1B-int LTR MaLR -1 1579 1 2106 122 59 31 chr5 130564657 130565011 -69065139 - THE1B LTR MaLR 0 364 1 1363 287 90 42 chr5 130567131 130568645 -69061505 + L1ME3A LINE L1 4514 6095 -75 1442 228 99 6 chr5 130569285 130569627 -69060523 - MLT1A2 LTR MaLR 0 374 1 2402 111 17 19 chr5 130569783 130570144 -69060006 + THE1B LTR MaLR 1 360 -4 2530 95 9 0 chr5 130570379 130570726 -69059424 + THE1A LTR MaLR 6 355 0 11344 108 5 0 chr5 130570726 130572298 -69057852 + THE1A-int LTR MaLR 1 1580 0 2539 92 17 0 chr5 130572298 130572647 -69057503 + THE1A LTR MaLR 1 355 0 1752 150 26 57 chr5 130573362 130573749 -69056401 - THE1C LTR MaLR 0 375 1 2218 78 0 3 chr5 130574286 130574592 -69055558 - AluSc SINE Alu 0 305 1 1063 93 7 0 chr5 130574594 130574734 -69055416 - AluSc SINE Alu -168 141 1 2356 94 3 0 chr5 130575319 130575666 -69054484 - AluSp SINE Alu 0 348 1 7667 104 3 2 chr5 130575676 130577619 -69052531 - L1PA8 LINE L1 0 6172 4241 25 0 0 0 chr5 130577669 130577694 -69052456 + AT_rich Low_complexity Low_complexity 1 25 0 293 282 69 15 chr5 130577777 130577908 -69052242 + L2 LINE L2 3115 3252 -61 227 347 129 10 chr5 130579651 130579844 -69050306 + L3 LINE CR1 249 464 -1113 338 314 125 68 chr5 130579946 130580516 -69049634 + L3 LINE CR1 652 1253 -324 2453 84 0 0 chr5 130580522 130580832 -69049318 - AluY SINE Alu -1 310 1 226 274 0 62 chr5 130580865 130580978 -69049172 + GA-rich Low_complexity Low_complexity 6 111 0 318 350 67 38 chr5 130581083 130581323 -69048827 + L3 LINE CR1 1277 1523 -54 703 247 50 0 chr5 130581599 130581781 -69048369 - MIR SINE MIR 0 262 72 21 0 0 0 chr5 130582082 130582103 -69048047 + AT_rich Low_complexity Low_complexity 1 21 0 269 198 66 91 chr5 130582373 130582494 -69047656 + L1MEd LINE L1 666 783 -5589 1605 192 60 50 chr5 130582494 130582974 -69047176 - MER31A LTR ERV1 0 485 1 245 282 0 0 chr5 130583007 130583078 -69047072 + L1MEd LINE L1 1262 1332 -5052 440 252 30 15 chr5 130583228 130583363 -69046787 + L1MEd LINE L1 1702 1838 -4725 21 71 0 0 chr5 130583491 130583533 -69046617 + AT_rich Low_complexity Low_complexity 1 42 0 3055 148 88 21 chr5 130583780 130584431 -69045719 + L1M1 LINE L1 2802 3495 -4070 6725 181 7 7 chr5 130584441 130585577 -69044573 + L1PA15-16 LINE L1 1 1136 -5713 5154 163 26 6 chr5 130585569 130586906 -69043244 + L1M1 LINE L1 5740 7101 -620 * 637 92 0 0 chr5 130587680 130587767 -69042383 - MSTB LTR MaLR -339 87 1 932 244 16 39 chr5 130587773 130588081 -69042069 - L1M4 LINE L1 -745 5401 5101 232 200 0 17 chr5 130588089 130588149 -69042001 - L1M4 LINE L1 -1382 4764 4706 485 97 0 0 chr5 130588149 130588211 -69041939 - MER11D LTR ERVK 0 897 836 5357 28 0 0 chr5 130588211 130588829 -69041321 + L1PA3 LINE L1 5517 6134 -21 4547 258 89 22 chr5 130588899 130589178 -69040972 - L1M4 LINE L1 -1710 4436 4177 2115 116 0 3 chr5 130589178 130589479 -69040671 + AluSg SINE Alu 1 300 -10 2138 91 7 0 chr5 130589481 130589778 -69040372 + AluY SINE Alu 1 299 -12 4547 258 89 22 chr5 130589778 130591333 -69038817 - L1M4 LINE L1 -1969 4177 2477 4183 194 72 35 chr5 130591338 130592490 -69037660 - Charlie6 DNA MER1_type -500 3000 1806 3675 144 7 7 chr5 130592494 130593105 -69037045 - L1MC1 LINE L1 -15 6318 5708 1885 222 50 24 chr5 130593106 130593642 -69036508 - L1MC1 LINE L1 -1140 5006 4457 5651 245 40 22 chr5 130593649 130594107 -69036043 - L1MC1 LINE L1 -1769 4377 3929 1993 103 7 0 chr5 130594107 130594416 -69035734 - AluY SINE Alu 0 316 6 5651 245 40 22 chr5 130594416 130595261 -69034889 - L1MC1 LINE L1 -2217 3929 3030 2244 114 0 0 chr5 130595261 130595559 -69034591 - AluSx SINE Alu -14 298 1 5651 245 40 22 chr5 130595559 130596027 -69034123 - L1MC1 LINE L1 -3116 3030 2572 2383 234 29 15 chr5 130596033 130596626 -69033524 - Charlie6 DNA MER1_type -1682 1818 1218 1450 194 91 3 chr5 130596626 130596935 -69033215 + MER2 DNA MER2_type 1 336 -9 3455 261 50 46 chr5 130596943 130598055 -69032095 - Charlie6 DNA MER1_type -2281 1219 104 284 250 0 0 chr5 130598230 130598290 -69031860 + LTR65 LTR ERV1 344 403 -266 238 268 55 73 chr5 130599505 130599669 -69030481 + L1ME3A LINE L1 5982 6142 -28 270 346 6 6 chr5 130599680 130599859 -69030291 + (TA)n Simple_repeat Simple_repeat 2 180 0 236 348 0 0 chr5 130601029 130601118 -69029032 - L2 LINE L2 -2865 449 361 243 146 0 0 chr5 130601613 130601654 -69028496 + (TA)n Simple_repeat Simple_repeat 1 41 0 342 0 0 0 chr5 130601657 130601695 -69028455 + (TG)n Simple_repeat Simple_repeat 2 39 0 13823 110 16 6 chr5 130601973 130604882 -69025268 - L1PA8A LINE L1 0 6131 3208 308 322 85 17 chr5 130604884 130605061 -69025089 - L1M4 LINE L1 -2229 4153 3965 771 243 27 27 chr5 130605566 130605788 -69024362 - MER58A DNA MER1_type -1 223 2 553 308 31 54 chr5 130605855 130606115 -69024035 - MIR SINE MIR -6 256 3 342 98 0 0 chr5 130606218 130606269 -69023881 + (TA)n Simple_repeat Simple_repeat 2 52 0 2160 254 29 49 chr5 130606680 130607074 -69023076 + L1M4 LINE L1 174 550 -5992 189 0 0 0 chr5 130607074 130607095 -69023055 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 2160 254 29 49 chr5 130607095 130607388 -69022762 + L1M4 LINE L1 550 847 -5695 361 280 250 12 chr5 130607441 130607609 -69022541 + MIR SINE MIR 38 245 -17 329 335 146 44 chr5 130608788 130608946 -69021204 - MER5A DNA MER1_type -6 183 10 1963 201 90 21 chr5 130609755 130610223 -69019927 + MLT1D LTR MaLR 1 500 -5 277 280 112 0 chr5 130612231 130612338 -69017812 + L2 LINE L2 3195 3313 0 198 354 15 0 chr5 130613651 130613716 -69016434 + MIR SINE MIR 20 85 -177 952 271 90 8 chr5 130613727 130614126 -69016024 - L1M4 LINE L1 -4701 1683 1252 1497 241 67 105 chr5 130614139 130614403 -69015747 + L1ME1 LINE L1 5429 5702 -464 11611 166 52 3 chr5 130614403 130617266 -69012884 + L1PA13 LINE L1 3247 6163 0 453 62 46 0 chr5 130617266 130617331 -69012819 + AluY SINE Alu 130 197 -114 1497 241 67 105 chr5 130617331 130617763 -69012387 + L1ME1 LINE L1 5700 6161 -5 758 213 85 32 chr5 130617786 130618109 -69012041 + L1ME2 LINE L1 5240 5576 -594 1071 75 0 0 chr5 130618114 130618247 -69011903 - AluSg/x SINE Alu -18 291 159 1960 256 9 20 chr5 130618263 130618799 -69011351 + L1ME2 LINE L1 5613 6142 -22 324 0 0 0 chr5 130619685 130619721 -69010429 + (TC)n Simple_repeat Simple_repeat 2 37 0 535 319 95 4 chr5 130619752 130619984 -69010166 - MIR SINE MIR 0 262 10 191 244 0 0 chr5 130620017 130620058 -69010092 - L2 LINE L2 -10 3303 3263 23 0 0 0 chr5 130620104 130620127 -69010023 + AT_rich Low_complexity Low_complexity 1 23 0 1840 162 28 12 chr5 130620340 130620667 -69009483 - MER1B DNA MER1_type 0 339 8 28 29 0 0 chr5 130620938 130620973 -69009177 + AT_rich Low_complexity Low_complexity 1 35 0 616 277 49 65 chr5 130621118 130621290 -69008860 - L1ME LINE L1 -516 5646 5480 1958 84 3 57 chr5 130621290 130621587 -69008563 - AluSp SINE Alu -11 302 22 616 277 49 65 chr5 130621587 130621721 -69008429 - L1ME LINE L1 -682 5480 5345 1105 101 0 0 chr5 130621733 130621905 -69008245 - AluSx SINE Alu 0 308 137 484 45 30 0 chr5 130621905 130621971 -69008179 - AluSx SINE Alu -242 71 4 250 304 95 60 chr5 130622142 130622761 -69007389 - L1ME LINE L1 -1005 5141 4501 316 224 50 84 chr5 130622784 130622963 -69007187 - L1 LINE L1 -1674 4472 4300 442 291 81 32 chr5 130622966 130623313 -69006837 - L1 LINE L1 -1890 4256 3893 2510 115 6 6 chr5 130624160 130624524 -69005626 - THE1B LTR MaLR 0 364 1 10188 119 33 6 chr5 130624524 130626062 -69004088 - THE1B-int LTR MaLR 0 1580 1 2380 123 11 16 chr5 130626062 130626428 -69003722 - THE1B LTR MaLR 0 364 1 27 29 0 0 chr5 130627016 130627050 -69003100 + AT_rich Low_complexity Low_complexity 1 34 0 918 252 28 0 chr5 130627555 130627769 -69002381 - MER58A DNA MER1_type 0 224 5 17050 101 6 4 chr5 130628717 130632023 -68998127 - L1PA7 LINE L1 0 6154 2838 28 48 0 0 chr5 130632359 130632401 -68997749 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr5 130632602 130632625 -68997525 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr5 130632712 130632762 -68997388 + AT_rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr5 130633981 130634004 -68996146 + AT_rich Low_complexity Low_complexity 1 23 0 2233 88 0 10 chr5 130634456 130634752 -68995398 - AluSc SINE Alu -16 293 1 288 0 0 0 chr5 130634787 130634819 -68995331 + (CA)n Simple_repeat Simple_repeat 2 33 0 2014 112 0 27 chr5 130636639 130636934 -68993216 - AluSx SINE Alu -25 287 1 23 97 0 0 chr5 130636939 130637011 -68993139 + AT_rich Low_complexity Low_complexity 1 72 0 360 86 69 0 chr5 130637038 130637096 -68993054 + U7 snRNA snRNA 2 63 0 191 300 67 67 chr5 130637169 130637439 -68992711 + L2 LINE L2 1798 2067 -1247 793 139 49 7 chr5 130637894 130638038 -68992112 - MER4D LTR ERV1 -722 150 1 280 405 13 0 chr5 130639094 130639247 -68990903 + MER115 DNA AcHobo 163 317 -376 23 0 0 0 chr5 130639569 130639592 -68990558 + AT_rich Low_complexity Low_complexity 1 23 0 2385 100 6 6 chr5 130640160 130640509 -68989641 - L1PA12 LINE L1 -1 6167 5819 714 350 123 42 chr5 130640638 130641622 -68988528 + L2 LINE L2 2203 3313 0 21 0 0 0 chr5 130642736 130642757 -68987393 + AT_rich Low_complexity Low_complexity 1 21 0 2163 104 3 3 chr5 130643448 130643734 -68986416 + AluSc SINE Alu 1 289 -20 306 0 0 0 chr5 130643734 130643768 -68986382 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 327 281 165 6 chr5 130644710 130644874 -68985276 + L3 LINE CR1 1318 1507 -70 217 145 145 32 chr5 130645355 130645417 -68984733 - L2 LINE L2 -219 3053 2985 195 257 14 155 chr5 130645587 130645735 -68984415 + L2 LINE L2 3143 3269 -3 38 22 0 0 chr5 130645769 130645814 -68984336 + AT_rich Low_complexity Low_complexity 1 45 0 2107 97 7 0 chr5 130646289 130646568 -68983582 + AluSq SINE Alu 1 281 -32 530 241 46 46 chr5 130647554 130647728 -68982422 - MLT1K LTR MaLR -23 565 392 374 281 54 48 chr5 130647933 130648100 -68982050 + MIR SINE MIR 81 248 -14 239 173 19 0 chr5 130648545 130648597 -68981553 + GA-rich Low_complexity Low_complexity 5 57 0 1682 148 90 29 chr5 130649091 130649256 -68980894 - MLT1A1 LTR MaLR 0 365 212 2242 139 34 14 chr5 130649256 130649695 -68980455 - LTR7 LTR ERV1 0 450 3 1682 148 90 29 chr5 130649695 130649873 -68980277 - MLT1A1 LTR MaLR -153 212 1 365 182 0 0 chr5 130650129 130650195 -68979955 + MLT2B3 LTR ERVL 3 68 -486 2049 187 51 68 chr5 130650289 130650760 -68979390 + MLT2B3 LTR ERVL 72 534 -20 375 23 0 0 chr5 130650761 130650805 -68979345 + (CA)n Simple_repeat Simple_repeat 1 44 0 1227 122 55 74 chr5 130650850 130651121 -68979029 + THE1C LTR MaLR 104 369 -6 1193 274 38 52 chr5 130651127 130651839 -68978311 - L1MEc LINE L1 -4487 2635 1934 602 295 29 34 chr5 130651819 130652321 -68977829 - L1MEc LINE L1 -5250 1173 649 * 2017 113 6 57 chr5 130652325 130652643 -68977507 - AluSq SINE Alu -11 302 1 302 351 81 17 chr5 130652713 130652887 -68977263 - L1MEc LINE L1 -5926 497 313 405 296 76 15 chr5 130653832 130653964 -68976186 - LTR67 LTR ERVL -331 226 87 668 316 69 8 chr5 130654275 130654622 -68975528 - HAL1 LINE L1 -590 1917 1526 1603 250 174 46 chr5 130655069 130655657 -68974493 - MLT2F LTR ERVL 0 663 1 2139 123 3 0 chr5 130656623 130656923 -68973227 + AluSx SINE Alu 1 301 -11 2792 166 59 19 chr5 130657384 130657975 -68972175 + L1MA7 LINE L1 5675 6289 -2 22 0 0 0 chr5 130658211 130658233 -68971917 + AT_rich Low_complexity Low_complexity 1 22 0 2333 58 0 32 chr5 130658516 130658825 -68971325 - AluY SINE Alu -12 299 1 844 159 0 29 chr5 130658911 130659049 -68971101 + AluJb SINE Alu 152 285 -27 361 286 113 24 chr5 130659086 130659334 -68970816 + L1M4 LINE L1 2204 2473 -3673 954 304 50 20 chr5 130659405 130659807 -68970343 + L2 LINE L2 2857 3270 -43 570 214 43 0 chr5 130659874 130659991 -68970159 + FLAM_C SINE Alu 3 124 -19 2981 189 42 19 chr5 130660019 130660742 -68969408 + MLT1-int LTR MaLR 29 887 -484 233 302 12 0 chr5 130660802 130660888 -68969262 + MLT-int LTR MaLR 686 772 -963 2241 191 26 12 chr5 130661007 130661426 -68968724 + MLT1B-int LTR MaLR 946 1370 -1 1816 162 9 125 chr5 130661427 130661858 -68968292 + MLT1B LTR MaLR 1 381 -9 448 282 102 50 chr5 130661952 130662511 -68967639 + L1MC4a LINE L1 5266 5438 -732 34 42 0 0 chr5 130662732 130662780 -68967370 + AT_rich Low_complexity Low_complexity 1 48 0 23 54 0 0 chr5 130663288 130663325 -68966825 + AT_rich Low_complexity Low_complexity 1 37 0 27 29 0 0 chr5 130663701 130663735 -68966415 + AT_rich Low_complexity Low_complexity 1 34 0 6320 83 32 1 chr5 130664632 130665524 -68964626 - L1PA11 LINE L1 0 6174 5255 490 122 0 0 chr5 130665652 130665726 -68964424 - MADE1 DNA Mariner -1 79 6 1569 163 54 128 chr5 130665733 130666078 -68964072 + MER54A LTR ERVL 527 839 -62 1442 155 0 0 chr5 130666078 130666317 -68963833 - L1MA3 LINE L1 0 6305 6067 1569 163 54 128 chr5 130666317 130666376 -68963774 + MER54A LTR ERVL 839 901 0 378 326 61 41 chr5 130666590 130666949 -68963201 - ERVL LTR ERVL -2151 3334 2967 513 295 53 36 chr5 130667021 130667302 -68962848 - ERVL LTR ERVL -2863 2901 2616 427 255 100 0 chr5 130667386 130667589 -68962561 - ERVL LTR ERVL -3210 2275 2083 5612 240 44 42 chr5 130669103 130670371 -68959779 + L1M4 LINE L1 2441 3715 -2431 2129 121 0 0 chr5 130670371 130670669 -68959481 + AluSx SINE Alu 1 298 -14 5612 240 44 42 chr5 130670669 130671405 -68958745 + L1M4 LINE L1 3715 4448 -1698 23 33 0 0 chr5 130671639 130671669 -68958481 + AT_rich Low_complexity Low_complexity 1 30 0 428 309 138 33 chr5 130672913 130673094 -68957056 - MIR3 SINE MIR -4 204 5 2318 71 0 14 chr5 130673513 130673810 -68956340 - AluY SINE Alu -18 293 1 198 156 0 0 chr5 130673866 130673911 -68956239 + T-rich Low_complexity Low_complexity 1 45 0 2174 297 94 23 chr5 130674035 130674866 -68955284 + L1M4 LINE L1 8 897 -5962 512 172 0 0 chr5 130674894 130674987 -68955163 + L1MA5A LINE L1 6193 6285 -12 8892 213 46 38 chr5 130675004 130675262 -68954888 + L1M4 LINE L1 3455 3709 -3280 5273 148 15 2 chr5 130675262 130676391 -68953759 + L1PA16 LINE L1 5017 6157 -9 8892 213 46 38 chr5 130676391 130678114 -68952036 + L1M4 LINE L1 3709 5417 -1572 1976 98 79 0 chr5 130678114 130678391 -68951759 + AluSc SINE Alu 1 299 -10 8892 213 46 38 chr5 130678391 130678521 -68951629 + L1M4 LINE L1 5417 5544 -1445 1615 157 22 0 chr5 130678521 130678619 -68951531 + AluSx SINE Alu 33 127 -185 207 0 0 0 chr5 130678619 130678642 -68951508 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1615 157 22 0 chr5 130678642 130678817 -68951333 + AluSx SINE Alu 127 312 0 8892 213 46 38 chr5 130678817 130679503 -68950647 + L1M4 LINE L1 5544 6272 -717 48 18 0 0 chr5 130679503 130679558 -68950592 + AT_rich Low_complexity Low_complexity 1 55 0 1023 313 130 30 chr5 130679941 130680854 -68949296 + L2 LINE L2 2304 3308 -5 922 330 53 34 chr5 130680859 130681481 -68948669 + L2 LINE L2 2462 3086 -186 230 337 0 35 chr5 130681559 130681645 -68948505 + MER5A DNA MER1_type 81 163 -26 217 302 47 47 chr5 130681670 130681776 -68948374 - L3 LINE CR1 -95 1482 1377 1131 201 52 20 chr5 130681787 130682036 -68948114 + AluJo SINE Alu 3 259 -53 229 326 121 48 chr5 130682143 130682514 -68947636 - L3 LINE CR1 -580 997 600 190 333 0 0 chr5 130682721 130682778 -68947372 - MIR SINE MIR -15 247 191 403 335 58 11 chr5 130682858 130683046 -68947104 - L3 LINE CR1 -1151 426 230 303 28 0 0 chr5 130684312 130684348 -68945802 + (CA)n Simple_repeat Simple_repeat 2 37 0 562 215 24 65 chr5 130684442 130684637 -68945513 + L1ME3A LINE L1 5972 6161 -9 1380 210 91 0 chr5 130684659 130685045 -68945105 - MER114 LTR ERV -139 509 89 22 0 0 0 chr5 130685206 130685228 -68944922 + AT_rich Low_complexity Low_complexity 1 22 0 24 85 0 0 chr5 130685281 130685340 -68944810 + AT_rich Low_complexity Low_complexity 1 59 0 1063 217 77 88 chr5 130685401 130685867 -68944283 + MLT2C2 LTR ERVL 1 461 -3 279 227 0 113 chr5 130686448 130686545 -68943605 - MLT1K LTR MaLR -10 578 493 310 312 149 51 chr5 130686963 130687258 -68942892 - L1ME3 LINE L1 -273 5889 5566 238 45 45 23 chr5 130687294 130687338 -68942812 + (TTTC)n Simple_repeat Simple_repeat 3 47 0 2296 112 0 0 chr5 130687340 130687644 -68942506 - AluSc SINE Alu -5 304 1 282 291 81 29 chr5 130687830 130688139 -68942011 - L1ME3 LINE L1 -927 5219 4895 972 209 0 31 chr5 130688259 130688450 -68941700 + Tigger3(Golem) DNA MER2_type 2 186 -2843 235 205 0 0 chr5 130688447 130688486 -68941664 + Tigger3(Golem) DNA MER2_type 2990 3028 -1 * 1057 300 14 0 chr5 130688541 130688831 -68941319 + L1MEc LINE L1 37 330 -6066 1285 285 65 29 chr5 130688850 130689810 -68940340 + L1MEc LINE L1 640 1670 -906 384 243 195 11 chr5 130689807 130689974 -68940176 + L1MA10 LINE L1 5975 6326 -6 * 3817 175 25 22 chr5 130690252 130690977 -68939173 + MER44D DNA MER2_type 7 605 0 2217 117 3 3 chr5 130690999 130691306 -68938844 + AluSx SINE Alu 1 307 -5 1018 205 0 0 chr5 130691800 130692000 -68938150 + L1MA4 LINE L1 5044 5243 -903 2060 122 122 10 chr5 130692000 130692385 -68937765 - MSTA LTR MaLR 0 428 1 8709 150 23 47 chr5 130692390 130692467 -68937683 - MSTA-int LTR MaLR -6 1574 1497 2372 97 0 0 chr5 130692467 130692765 -68937385 - AluY SINE Alu -13 298 1 8709 150 23 47 chr5 130692765 130694297 -68935853 - MSTA-int LTR MaLR -83 1497 3 2083 141 108 10 chr5 130694299 130694689 -68935461 - MSTA LTR MaLR 0 428 1 4923 181 47 8 chr5 130694704 130695703 -68934447 + L1MA4 LINE L1 5254 6291 -9 26 0 0 0 chr5 130695704 130695730 -68934420 + AT_rich Low_complexity Low_complexity 1 26 0 355 322 26 74 chr5 130695732 130695962 -68934188 - L1ME LINE L1 -401 5720 5502 27 29 0 0 chr5 130696000 130696034 -68934116 + AT_rich Low_complexity Low_complexity 1 34 0 487 78 0 39 chr5 130696658 130696735 -68933415 - L1PA13 LINE L1 -5 6158 6085 562 86 0 0 chr5 130696735 130696815 -68933335 - L1PA13 LINE L1 -17 6146 6066 1553 94 0 5 chr5 130696815 130697038 -68933112 + L1PA13 LINE L1 5835 6056 -107 494 261 64 39 chr5 130697634 130697837 -68932313 - MLT1K LTR MaLR 0 588 381 3039 147 16 0 chr5 130698141 130698630 -68931520 - LOR1a LTR ERV1 0 497 1 801 251 53 10 chr5 130698950 130699157 -68930993 - MIR SINE MIR -2 260 45 297 119 0 0 chr5 130699384 130699426 -68930724 - LOR1a LTR ERV1 -243 254 213 180 255 64 0 chr5 130699639 130699686 -68930464 - L2 LINE L2 -13 3259 3210 5485 118 0 0 chr5 130701912 130702275 -68927875 - L1PA15 LINE L1 -6 6159 5797 2196 113 0 26 chr5 130702275 130702585 -68927565 - AluY SINE Alu -9 302 1 5485 118 0 0 chr5 130702585 130703137 -68927013 - L1PA15 LINE L1 -367 5798 5229 464 289 20 7 chr5 130703458 130703628 -68926522 - L1ME2 LINE L1 -2 6164 5993 1780 196 100 0 chr5 130703659 130704160 -68925990 - MER114 LTR ERV -86 562 12 24 0 0 0 chr5 130704491 130704515 -68925635 + AT_rich Low_complexity Low_complexity 1 24 0 2067 132 3 0 chr5 130704529 130704817 -68925333 - AluSx SINE Alu -23 289 1 264 293 0 0 chr5 130704835 130704893 -68925257 - MER94 DNA DNA -73 61 4 325 296 21 42 chr5 130704992 130705134 -68925016 + L2 LINE L2 3159 3297 -16 21 57 0 0 chr5 130705209 130705244 -68924906 + AT_rich Low_complexity Low_complexity 1 35 0 5019 60 18 15 chr5 130705903 130706568 -68923582 - PABL_B LTR ERV1 0 667 1 36 40 0 0 chr5 130706949 130706999 -68923151 + AT_rich Low_complexity Low_complexity 1 50 0 1461 145 8 0 chr5 130707404 130707638 -68922512 - L1PB4 LINE L1 -105 6051 5816 203 147 0 0 chr5 130708130 130708164 -68921986 + (CA)n Simple_repeat Simple_repeat 1 34 0 709 287 84 75 chr5 130708970 130709671 -68920479 + L1MEd LINE L1 576 1267 -4862 452 316 124 0 chr5 130709673 130709850 -68920300 + L1MEc LINE L1 36 234 -6162 508 131 12 0 chr5 130709862 130709946 -68920204 + MER61E LTR ERV1 1 85 -484 226 246 0 15 chr5 130710081 130710146 -68920004 + LTR28 LTR ERV1 161 224 -796 * 229 238 143 0 chr5 130710139 130710202 -68919948 + MER51A LTR ERV1 209 280 -354 * 1092 234 83 26 chr5 130710173 130710524 -68919626 + LTR25 LTR ERV1 415 785 -9 631 257 44 22 chr5 130710553 130710779 -68919371 + L1MEc LINE L1 285 515 -5881 3890 252 60 30 chr5 130710838 130711190 -68918960 + L1MEc LINE L1 759 1099 -5116 2157 110 16 16 chr5 130711190 130711500 -68918650 + AluSg SINE Alu 1 310 0 3890 252 60 30 chr5 130711500 130713930 -68916220 + L1MEc LINE L1 1099 3579 -2636 * 11340 31 4 0 chr5 130713928 130715323 -68914827 - L1P LINE L1 -2071 4075 2675 7369 33 1 0 chr5 130715323 130716204 -68913946 + L1PA4 LINE L1 5267 6152 -3 567 224 61 41 chr5 130716211 130716407 -68913743 + L1MEc LINE L1 3575 3774 -2441 3213 136 22 6 chr5 130716443 130716989 -68913161 - L1PB4 LINE L1 -9 6147 5593 1738 168 45 8 chr5 130717002 130717360 -68912790 - L1MA6 LINE L1 0 6300 5930 5529 101 58 9 chr5 130717360 130718262 -68911888 - L1PA14 LINE L1 -26 6135 5188 423 306 38 27 chr5 130718325 130718511 -68911639 - L2 LINE L2 -622 2692 2505 578 284 95 46 chr5 130718511 130718796 -68911354 - L2 LINE L2 -1149 2165 1867 233 313 42 0 chr5 130719401 130719497 -68910653 - L3 LINE CR1 -1078 499 400 219 389 56 0 chr5 130719731 130719821 -68910329 - L3 LINE CR1 -1423 154 60 259 341 49 8 chr5 130720056 130720179 -68909971 + L2 LINE L2 3182 3309 -4 197 90 64 26 chr5 130720761 130720839 -68909311 + (TTATA)n Simple_repeat Simple_repeat 2 82 0 241 255 5 73 chr5 130720947 130721139 -68909011 + (TA)n Simple_repeat Simple_repeat 1 179 0 186 103 0 0 chr5 130721171 130721200 -68908950 + (CTATT)n Simple_repeat Simple_repeat 2 30 0 26 0 0 0 chr5 130721891 130721917 -68908233 + AT_rich Low_complexity Low_complexity 1 26 0 5009 146 6 8 chr5 130721939 130722740 -68907410 - L1PA16 LINE L1 -5 6161 5362 248 51 0 26 chr5 130723367 130723406 -68906744 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 582 174 9 0 chr5 130723417 130723526 -68906624 - AluJb SINE Alu -202 110 1 287 312 32 8 chr5 130723664 130723789 -68906361 + L1MC4a LINE L1 6042 6169 -1639 2154 124 0 3 chr5 130723793 130724100 -68906050 + AluSx SINE Alu 1 306 -6 893 172 12 6 chr5 130724337 130724500 -68905650 - HERVL74 LTR ERVL -5521 164 1 6449 152 46 9 chr5 130724531 130725701 -68904449 + Ricksha_b DNA DNA 1 1247 -7 2053 160 22 3 chr5 130725708 130726111 -68904039 - MER74C LTR ERVL -10 450 1 368 299 15 37 chr5 130726133 130726267 -68903883 + MER5A DNA MER1_type 54 184 -5 545 263 108 5 chr5 130726274 130726468 -68903682 + MIR SINE MIR 28 241 -21 1858 130 28 0 chr5 130726515 130726799 -68903351 + AluSx SINE Alu 1 292 -20 28 0 0 0 chr5 130727387 130727415 -68902735 + AT_rich Low_complexity Low_complexity 1 28 0 295 117 78 65 chr5 130727415 130727492 -68902658 - L1MA9 LINE L1 0 6312 6235 * 347 111 49 136 chr5 130727489 130727570 -68902580 - L1MA9 LINE L1 -109 6186 6109 12416 105 16 5 chr5 130728018 130730655 -68899495 - L1PA7 LINE L1 -15 6139 3482 1642 185 18 0 chr5 130730738 130731024 -68899126 + AluJo SINE Alu 3 293 -19 354 215 0 0 chr5 130731024 130731103 -68899047 + (CATATA)n Simple_repeat Simple_repeat 5 83 0 497 318 19 43 chr5 130731268 130731526 -68898624 - MIR SINE MIR -4 258 7 569 166 25 38 chr5 130731657 130731814 -68898336 - Charlie5 DNA MER1_type 0 2623 2469 23 33 0 0 chr5 130731942 130731972 -68898178 + AT_rich Low_complexity Low_complexity 1 30 0 1000 142 15 30 chr5 130732112 130732128 -68898022 - L1P5 LINE L1 -660 5496 5481 3054 204 29 1 chr5 130732128 130732789 -68897361 - L1PB4 LINE L1 -2 6154 5476 1590 50 0 0 chr5 130732799 130732999 -68897151 - L1PA4 LINE L1 -3 6152 5953 1000 142 15 30 chr5 130732999 130733168 -68896982 - L1P5 LINE L1 -684 5472 5303 1820 183 50 8 chr5 130734220 130734602 -68895548 - MER63B DNA MER1_type -26 410 13 4863 164 43 27 chr5 130734602 130735580 -68894570 + L1MC3 LINE L1 6791 7784 -1 27 49 0 0 chr5 130735757 130735798 -68894352 + AT_rich Low_complexity Low_complexity 1 41 0 28 95 0 0 chr5 130736321 130736405 -68893745 + AT_rich Low_complexity Low_complexity 1 84 0 242 320 60 0 chr5 130737083 130737183 -68892967 + L2 LINE L2 1896 2001 -1313 5426 166 23 24 chr5 130737242 130737924 -68892226 - L1MA4 LINE L1 -5 6295 5614 2006 155 0 0 chr5 130737924 130738234 -68891916 - AluSg SINE Alu 0 310 1 5426 166 23 24 chr5 130738234 130740020 -68890130 - L1MA4 LINE L1 -686 5614 3734 2208 280 69 55 chr5 130740022 130740352 -68889798 - Charlie2b DNA MER1_type -1209 1573 1249 2057 131 0 0 chr5 130740352 130740680 -68889470 + AluSx SINE Alu 1 328 0 2208 280 69 55 chr5 130740680 130741476 -68888674 - Charlie2b DNA MER1_type -1533 1249 430 305 250 33 11 chr5 130741501 130741593 -68888557 - Charlie2b DNA MER1_type -2627 155 62 181 338 65 65 chr5 130741934 130742088 -68888062 + L2 LINE L2 3116 3269 -3 283 346 150 31 chr5 130742224 130742551 -68887599 - L3 LINE CR1 -171 1406 1041 2258 221 94 44 chr5 130742706 130743527 -68886623 - L1ME1 LINE L1 -148 6018 5098 2010 60 0 0 chr5 130743527 130743778 -68886372 - AluY SINE Alu 0 311 61 2258 221 94 44 chr5 130743778 130744449 -68885701 - L1ME1 LINE L1 -1068 5098 4462 25 31 0 0 chr5 130744525 130744557 -68885593 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr5 130744713 130744739 -68885411 + AT_rich Low_complexity Low_complexity 1 26 0 4786 148 24 0 chr5 130744967 130746292 -68883858 - L1PA15 LINE L1 -2 6163 4798 210 37 0 0 chr5 130746296 130746323 -68883827 + (TTA)n Simple_repeat Simple_repeat 3 29 0 20927 30 0 0 chr5 130746323 130749588 -68880562 - L1PA2 LINE L1 -18 6137 2874 2116 184 49 72 chr5 130751501 130752056 -68878094 - L1MD3 LINE L1 0 7995 7454 240 310 56 35 chr5 130752591 130752733 -68877417 + L3 LINE CR1 974 1118 -459 214 334 138 62 chr5 130753358 130753663 -68876487 + L3 LINE CR1 1216 1543 -34 2239 116 3 0 chr5 130755381 130755692 -68874458 - AluSx SINE Alu 0 312 1 1267 244 122 18 chr5 130756740 130756900 -68873250 - MER110 LTR ERV1 0 491 349 2181 112 29 15 chr5 130756900 130757240 -68872910 - L1PA16 LINE L1 -3 6163 5819 1267 244 122 18 chr5 130757240 130757257 -68872893 - MER110 LTR ERV1 -142 349 335 551 218 36 0 chr5 130757257 130757367 -68872783 + MER81 DNA DNA 1 114 0 1267 244 122 18 chr5 130757367 130757631 -68872519 - MER110 LTR ERV1 -156 335 3 319 289 13 22 chr5 130758003 130758148 -68872002 - MIR SINE MIR -66 142 20 7385 169 146 16 chr5 130759015 130760568 -68869582 - MER52A LTR ERV1 0 1755 1 351 321 36 9 chr5 130760883 130760995 -68869155 - L2 LINE L2 0 3272 3158 238 284 53 77 chr5 130761255 130761424 -68868726 - L2 LINE L2 -2782 532 368 1566 224 3 37 chr5 130762147 130762306 -68867844 + MLT1A1 LTR MaLR 1 164 -201 2219 104 3 0 chr5 130762306 130762613 -68867537 + AluSg SINE Alu 1 308 -2 1566 224 3 37 chr5 130762613 130762828 -68867322 + MLT1A1 LTR MaLR 164 362 -3 256 273 46 150 chr5 130762987 130763247 -68866903 + MIR SINE MIR 9 241 -21 287 296 105 23 chr5 130763435 130763572 -68866578 - MIR3 SINE MIR -37 171 46 693 253 143 54 chr5 130763982 130764389 -68865761 + MLT1H LTR MaLR 81 523 -26 1161 101 0 0 chr5 130764476 130764644 -68865506 + L1MA3 LINE L1 6137 6304 -1 232 340 128 34 chr5 130765149 130765384 -68864766 + L2 LINE L2 2692 2948 -366 476 285 7 7 chr5 130765387 130765531 -68864619 + MER69A DNA AcHobo 1 144 -33 956 208 132 19 chr5 130766892 130767209 -68862941 - MER114 LTR ERV 0 648 283 2786 117 9 7 chr5 130767209 130767652 -68862498 + L1PA13 LINE L1 5720 6163 0 956 208 132 19 chr5 130767652 130767699 -68862451 - MER114 LTR ERV -365 283 243 373 159 29 0 chr5 130767755 130767824 -68862326 - MER94 DNA DNA -63 71 1 200 372 51 0 chr5 130767886 130767964 -68862186 - L2 LINE L2 -44 3228 3147 2607 161 13 51 chr5 130768157 130768691 -68861459 - MER67D LTR ERV1 0 514 1 365 299 114 6 chr5 130769424 130769591 -68860559 + MIR SINE MIR 77 261 -1 447 305 48 31 chr5 130770124 130770350 -68859800 - MIR SINE MIR 0 262 20 870 266 22 9 chr5 130770635 130770864 -68859286 + MIR SINE MIR 30 261 -1 36 40 0 0 chr5 130770868 130770918 -68859232 + AT_rich Low_complexity Low_complexity 1 50 0 216 67 0 0 chr5 130771155 130771185 -68858965 + (TG)n Simple_repeat Simple_repeat 1 30 0 2459 58 3 0 chr5 130772858 130773168 -68856982 + AluY SINE Alu 1 311 0 2384 73 0 0 chr5 130773186 130773486 -68856664 + AluY SINE Alu 1 300 -11 4690 162 52 32 chr5 130773783 130774458 -68855692 + L1MA7 LINE L1 4619 5280 -1011 1825 181 88 8 chr5 130774458 130774857 -68855293 + MSTB1 LTR MaLR 1 431 -1 4690 162 52 32 chr5 130774857 130775325 -68854825 + L1MA7 LINE L1 5280 5738 -553 297 89 0 0 chr5 130775325 130775370 -68854780 + (CA)n Simple_repeat Simple_repeat 2 46 0 4690 162 52 32 chr5 130775370 130775851 -68854299 + L1MA7 LINE L1 5738 6282 -9 235 269 75 0 chr5 130776070 130776137 -68854013 + MIR SINE MIR 105 176 -86 1462 107 5 14 chr5 130776413 130776629 -68853521 - AluSp SINE Alu -99 214 1 2337 114 25 8 chr5 130776847 130777205 -68852945 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr5 130778090 130778111 -68852039 + AT_rich Low_complexity Low_complexity 1 21 0 685 309 55 62 chr5 130780623 130781354 -68848796 - L2 LINE L2 -20 3293 2559 349 265 23 15 chr5 130781354 130781486 -68848664 - L2 LINE L2 -858 2456 2324 24 32 0 0 chr5 130781601 130781632 -68848518 + AT_rich Low_complexity Low_complexity 1 31 0 2359 292 46 17 chr5 130781971 130783536 -68846614 + ERVL LTR ERVL 1520 3235 -2419 574 307 34 8 chr5 130783678 130783945 -68846205 - L1M4 LINE L1 -2317 3829 3556 21 0 0 0 chr5 130783992 130784013 -68846137 + AT_rich Low_complexity Low_complexity 1 21 0 585 218 44 23 chr5 130784042 130784352 -68845798 + MER63 DNA MER1_type 49 428 -633 1662 183 48 60 chr5 130784378 130784602 -68845548 + MER63 DNA MER1_type 665 883 -177 2253 85 3 0 chr5 130784602 130784896 -68845254 + AluY SINE Alu 1 295 -16 1662 183 48 60 chr5 130784896 130785070 -68845080 + MER63 DNA MER1_type 883 1058 -2 848 249 66 125 chr5 130785075 130785918 -68844232 - L1M4 LINE L1 -2598 3548 2755 311 263 91 63 chr5 130786276 130786451 -68843699 - L1M4 LINE L1 -3829 2317 2138 922 225 13 89 chr5 130786487 130786803 -68843347 - L1M4 LINE L1 -2095 4051 3760 1152 236 152 91 chr5 130786805 130787418 -68842732 - MLT1E1 LTR MaLR 0 654 5 21 0 0 0 chr5 130788878 130788899 -68841251 + AT_rich Low_complexity Low_complexity 1 21 0 403 266 16 8 chr5 130789179 130789303 -68840847 - LTR33 LTR ERVL -5 516 392 250 280 40 20 chr5 130789455 130789555 -68840595 + Charlie2 DNA MER1_type 46 147 -2715 1746 106 24 16 chr5 130789566 130789852 -68840298 - AluSc SINE Alu 0 326 39 467 234 48 28 chr5 130789889 130790034 -68840116 + Charlie2 DNA MER1_type 433 580 -2282 * 564 326 55 11 chr5 130790026 130790299 -68839851 - LTR33 LTR ERVL -234 287 3 212 179 0 0 chr5 130790390 130790429 -68839721 + (TA)n Simple_repeat Simple_repeat 1 39 0 203 311 9 19 chr5 130790475 130790575 -68839575 + (TATATG)n Simple_repeat Simple_repeat 2 101 0 2208 173 23 23 chr5 130790575 130791009 -68839141 - Tigger2a DNA MER2_type 0 434 1 1639 205 62 9 chr5 130791343 130791684 -68838466 - MLT1A1 LTR MaLR -6 359 1 285 341 0 0 chr5 130791715 130791800 -68838350 + L2 LINE L2 3188 3272 0 861 175 0 50 chr5 130792329 130792489 -68837661 - FRAM SINE Alu -25 151 1 449 310 86 5 chr5 130792515 130792702 -68837448 - MIR SINE MIR -1 261 60 277 303 105 12 chr5 130793975 130794137 -68836013 - LTR16C LTR ERVL -2 489 313 1588 136 92 73 chr5 130794210 130794578 -68835572 - THE1C LTR MaLR 0 375 1 25 0 0 0 chr5 130794771 130794796 -68835354 + AT_rich Low_complexity Low_complexity 1 25 0 1947 161 71 22 chr5 130795188 130795718 -68834432 - MLT2A2 LTR ERVL 0 554 3 2314 88 0 3 chr5 130795722 130796018 -68834132 - AluSg SINE Alu -15 295 1 664 318 77 58 chr5 130796165 130796631 -68833519 + ERVL LTR ERVL 3261 3735 -2029 605 329 23 36 chr5 130796830 130797134 -68833016 + ERVL LTR ERVL 3986 4285 -1479 585 267 58 18 chr5 130797531 130797756 -68832394 + ERVL LTR ERVL 4821 5054 -710 232 303 28 21 chr5 130798537 130798679 -68831471 + L1 LINE L1 2635 2777 -3369 889 269 79 86 chr5 130799543 130799721 -68830429 - L2 LINE L2 0 3313 3135 2045 133 3 37 chr5 130799721 130800045 -68830105 + AluSq SINE Alu 1 313 0 948 89 0 58 chr5 130800055 130800246 -68829904 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 889 269 79 86 chr5 130800246 130800682 -68829468 - L2 LINE L2 -187 3126 2691 316 375 46 26 chr5 130801268 130801420 -68828730 + L2 LINE L2 3099 3253 -19 210 143 0 0 chr5 130801701 130801736 -68828414 + (TA)n Simple_repeat Simple_repeat 1 35 0 229 230 54 27 chr5 130801804 130801878 -68828272 - MIR SINE MIR -14 248 173 188 281 44 70 chr5 130802665 130802779 -68827371 + MIR SINE MIR 135 245 -17 192 125 0 0 chr5 130802784 130802816 -68827334 + (CAT)n Simple_repeat Simple_repeat 2 33 0 306 340 170 22 chr5 130802923 130803194 -68826956 + HAL1 LINE L1 84 394 -2113 769 278 101 25 chr5 130803313 130803719 -68826431 + Charlie8 DNA MER1_type 606 1042 -1375 3578 98 2 4 chr5 130803776 130804286 -68825864 - L1PA13 LINE L1 -2 6161 5653 261 321 21 21 chr5 130804297 130804437 -68825713 + Charlie8 DNA MER1_type 1051 1190 -1227 359 273 50 14 chr5 130804521 130804660 -68825490 - MLT1L LTR MaLR -10 605 462 1899 272 72 21 chr5 130804969 130805719 -68824431 + Charlie8 DNA MER1_type 1297 2084 -333 34 42 0 0 chr5 130805803 130805851 -68824299 + AT_rich Low_complexity Low_complexity 1 48 0 1489 211 86 94 chr5 130806183 130806705 -68823445 + MLT2B1 LTR ERVL 3 520 0 254 186 0 0 chr5 130806881 130806924 -68823226 - MER5A DNA MER1_type -116 73 31 23 33 0 0 chr5 130807966 130807996 -68822154 + AT_rich Low_complexity Low_complexity 1 30 0 3794 37 0 0 chr5 130808129 130808594 -68821556 - L1PA5 LINE L1 -1299 4847 4383 7374 42 1 0 chr5 130808594 130809890 -68820260 + L1PA5 LINE L1 4854 6150 -4 195 42 0 0 chr5 130810837 130810861 -68819289 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2371 84 3 3 chr5 130811368 130811677 -68818473 + AluSc SINE Alu 1 309 0 214 274 0 0 chr5 130812111 130812173 -68817977 + A-rich Low_complexity Low_complexity 2 63 0 628 62 12 0 chr5 130812179 130812259 -68817891 + THE1B LTR MaLR 1 81 -283 1027 166 33 5 chr5 130812509 130812720 -68817430 + L1MA8 LINE L1 6071 6287 -4 21 0 0 0 chr5 130813386 130813407 -68816743 + AT_rich Low_complexity Low_complexity 1 21 0 2096 133 3 0 chr5 130813514 130813808 -68816342 - AluSx SINE Alu -15 297 3 1699 215 73 18 chr5 130814181 130814619 -68815531 - MLT1C LTR MaLR 0 467 6 2337 93 0 6 chr5 130814814 130815125 -68815025 + AluSg SINE Alu 1 309 -1 652 292 67 19 chr5 130815817 130816084 -68814066 + MLT2F LTR ERVL 1 280 -383 546 228 28 33 chr5 130816120 130816300 -68813850 - MER96B DNA MER1_type? -238 179 1 814 305 30 44 chr5 130816302 130816708 -68813442 + MLT2F LTR ERVL 264 663 0 384 320 81 41 chr5 130817099 130817165 -68812985 - L3 LINE CR1 -353 1224 1162 1883 173 9 120 chr5 130817165 130817690 -68812460 - MLT1C LTR MaLR 0 467 1 384 320 81 41 chr5 130817690 130817820 -68812330 - L3 LINE CR1 -415 1162 1020 294 350 10 0 chr5 130817839 130817936 -68812214 - L2 LINE L2 -1 3312 3215 2579 132 8 6 chr5 130817938 130818608 -68811542 - L1P4 LINE L1 -586 5575 4904 531 136 0 0 chr5 130818610 130818691 -68811459 - MSTB-int LTR MaLR -1570 81 1 2348 151 36 12 chr5 130818691 130819107 -68811043 - MSTB LTR MaLR 0 426 1 337 254 264 26 chr5 130819398 130819591 -68810559 + L1ME4a LINE L1 5881 6119 -2 30 0 0 0 chr5 130819843 130819873 -68810277 + AT_rich Low_complexity Low_complexity 1 30 0 424 241 60 52 chr5 130820906 130820973 -68809177 - L2 LINE L2 -3 3310 3240 2384 138 16 5 chr5 130820973 130821344 -68808806 - THE1C LTR MaLR 0 375 1 424 241 60 52 chr5 130821344 130821392 -68808758 - L2 LINE L2 -73 3240 3194 213 287 220 20 chr5 130821501 130821651 -68808499 + MER5A DNA MER1_type 10 189 0 1703 145 0 68 chr5 130822409 130822705 -68807445 + AluSx SINE Alu 1 276 -36 224 239 28 0 chr5 130823242 130823313 -68806837 + (TTTG)n Simple_repeat Simple_repeat 4 76 0 227 200 0 158 chr5 130823323 130823373 -68806777 + Charlie8 DNA MER1_type 94 125 -2292 2042 129 4 0 chr5 130823373 130823681 -68806469 - AluSx SINE Alu 0 309 1 227 200 0 158 chr5 130823681 130823724 -68806426 + Charlie8 DNA MER1_type 125 173 -2244 493 222 197 0 chr5 130824344 130824461 -68805689 - MER5A DNA MER1_type -8 181 42 309 302 74 27 chr5 130825876 130826025 -68804125 - MIR SINE MIR -40 222 67 193 349 174 0 chr5 130826326 130826498 -68803652 - MIR SINE MIR -14 248 47 231 337 124 30 chr5 130826564 130826733 -68803417 + L3 LINE CR1 604 788 -789 395 341 165 32 chr5 130826749 130827095 -68803055 + L3 LINE CR1 1054 1445 -132 3713 119 34 42 chr5 130827098 130827738 -68802412 - MER41B LTR ERV1 0 635 1 259 246 33 16 chr5 130827764 130827825 -68802325 + MIR SINE MIR 13 74 -188 204 97 0 0 chr5 130828249 130828280 -68801870 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1741 163 4 4 chr5 130828282 130828559 -68801591 - AluJb SINE Alu -30 282 6 2015 146 3 3 chr5 130828620 130828929 -68801221 - AluJb SINE Alu -3 309 1 2466 78 0 0 chr5 130830360 130830668 -68799482 - AluY SINE Alu -3 308 1 283 250 0 0 chr5 130830759 130830831 -68799319 - L1M4 LINE L1 -1305 4841 4770 1935 167 0 6 chr5 130831221 130831533 -68798617 + AluJo SINE Alu 1 310 -2 22 56 0 0 chr5 130831720 130831756 -68798394 + AT_rich Low_complexity Low_complexity 1 36 0 233 301 24 12 chr5 130831818 130831901 -68798249 - MIR SINE MIR -109 153 70 180 77 0 0 chr5 130831990 130832016 -68798134 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 939 171 0 0 chr5 130832017 130832163 -68797987 - FRAM SINE Alu -30 146 1 357 324 183 40 chr5 130834131 130834772 -68795378 - L2 LINE L2 -32 3240 2535 254 284 0 12 chr5 130835125 130835206 -68794944 + (TA)n Simple_repeat Simple_repeat 1 80 0 24 32 0 0 chr5 130835655 130835686 -68794464 + AT_rich Low_complexity Low_complexity 1 31 0 396 145 231 34 chr5 130836427 130836544 -68793606 - MER67D LTR ERV1 -4 510 371 314 182 15 0 chr5 130836585 130836651 -68793499 - L1MA9 LINE L1 -38 6274 6208 1895 177 23 58 chr5 130836653 130837048 -68793102 - MER67D LTR ERV1 -133 381 1 215 297 0 31 chr5 130837272 130837336 -68792814 - MIR SINE MIR 0 262 201 34 42 0 0 chr5 130838146 130838194 -68791956 + AT_rich Low_complexity Low_complexity 1 48 0 400 246 115 8 chr5 130838332 130838454 -68791696 + L2 LINE L2 3179 3313 0 28 0 0 0 chr5 130839427 130839455 -68790695 + AT_rich Low_complexity Low_complexity 1 28 0 5026 151 14 6 chr5 130839455 130840325 -68789825 - L1PB4 LINE L1 -3 6153 5277 270 293 55 28 chr5 130841331 130841512 -68788638 - MLT1K LTR MaLR 0 588 403 1898 163 0 22 chr5 130841776 130842095 -68788055 - AluJo SINE Alu 0 312 1 1729 171 13 0 chr5 130842100 130842398 -68787752 - L1MB2 LINE L1 -46 6125 5824 1067 171 49 83 chr5 130842750 130843014 -68787136 - L1MD2 LINE L1 -1 6358 6104 759 274 44 20 chr5 130844132 130844380 -68785770 - MIR SINE MIR 0 262 9 1107 103 6 0 chr5 130844442 130844607 -68785543 - L1P LINE L1 -3584 2562 2397 7926 81 23 2 chr5 130844611 130846447 -68783703 + L1PA7 LINE L1 4281 6140 -14 324 211 0 0 chr5 130846637 130846713 -68783437 + (TA)n Simple_repeat Simple_repeat 2 77 0 1633 256 72 25 chr5 130846847 130847500 -68782650 - HAL1 LINE L1 -755 1752 1069 573 110 0 0 chr5 130847628 130847719 -68782431 + (TA)n Simple_repeat Simple_repeat 1 91 0 2334 71 10 0 chr5 130847719 130848016 -68782134 - AluY SINE Alu -11 300 1 499 323 71 16 chr5 130848376 130848630 -68781520 - HAL1 LINE L1 -2238 269 2 400 290 6 23 chr5 130849802 130849978 -68780172 - L1MB8 LINE L1 0 6178 6006 1730 148 24 10 chr5 130850038 130850335 -68779815 + AluJo SINE Alu 3 303 -9 30 0 0 0 chr5 130850734 130850764 -68779386 + AT_rich Low_complexity Low_complexity 1 30 0 183 42 0 0 chr5 130850917 130850941 -68779209 + (TC)n Simple_repeat Simple_repeat 1 24 0 1994 282 96 26 chr5 130851061 130852220 -68777930 - L1ME3A LINE L1 -44 6126 4885 207 279 0 16 chr5 130852546 130852607 -68777543 + CT-rich Low_complexity Low_complexity 1 60 0 1434 163 47 78 chr5 130853133 130853520 -68776630 + L1MA8 LINE L1 5912 6286 -5 31 26 0 0 chr5 130853520 130853558 -68776592 + AT_rich Low_complexity Low_complexity 1 38 0 240 119 51 0 chr5 130855309 130855368 -68774782 + (TTA)n Simple_repeat Simple_repeat 2 63 0 22 35 0 0 chr5 130855812 130855841 -68774309 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 130856416 130856438 -68773712 + AT_rich Low_complexity Low_complexity 1 22 0 241 197 0 82 chr5 130856791 130856852 -68773298 - L1MC4a LINE L1 -1883 5925 5870 461 328 50 15 chr5 130857900 130858101 -68772049 - MIR SINE MIR -15 247 40 180 178 111 22 chr5 130858772 130858817 -68771333 - L3 LINE CR1 -162 1415 1367 183 80 0 0 chr5 130860088 130860113 -68770037 + (CAA)n Simple_repeat Simple_repeat 3 27 0 267 278 206 8 chr5 130861721 130861847 -68768303 - MIR SINE MIR -2 260 110 2100 123 3 0 chr5 130862667 130862976 -68767174 + AluSx SINE Alu 1 310 -2 2468 56 0 10 chr5 130863419 130863725 -68766425 - AluY SINE Alu -8 303 1 471 303 47 92 chr5 130863997 130864581 -68765569 + L2 LINE L2 2725 3275 -38 21 0 0 0 chr5 130866674 130866695 -68763455 + AT_rich Low_complexity Low_complexity 1 21 0 227 299 149 15 chr5 130866824 130866958 -68763192 + LTR68 LTR ERV1 14 165 -575 23 33 0 0 chr5 130867604 130867634 -68762516 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 130868235 130868268 -68761882 + AT_rich Low_complexity Low_complexity 1 33 0 861 249 170 50 chr5 130868360 130868842 -68761308 - MLT1H1 LTR MaLR 0 555 16 658 289 28 5 chr5 130870633 130870844 -68759306 - MIR SINE MIR 0 262 47 603 230 50 6 chr5 130871074 130871235 -68758915 - L1ME3 LINE L1 0 6162 5995 2532 117 0 11 chr5 130871235 130871603 -68758547 - THE1B LTR MaLR 0 364 1 10512 115 4 30 chr5 130871603 130873224 -68756926 - THE1B-int LTR MaLR 0 1580 1 391 80 0 0 chr5 130873224 130873274 -68756876 - THE1B LTR MaLR 0 364 315 1499 169 3 38 chr5 130873778 130874068 -68756082 + AluJo SINE Alu 28 307 -5 776 172 135 18 chr5 130874157 130874320 -68755830 - AluJb SINE Alu -126 186 5 802 234 97 57 chr5 130875564 130875863 -68754287 + LTR16A1 LTR ERVL 11 321 -136 1686 170 14 3 chr5 130876503 130876786 -68753364 + AluJo SINE Alu 1 286 -26 40 59 0 0 chr5 130877785 130877853 -68752297 + AT_rich Low_complexity Low_complexity 1 68 0 783 330 115 32 chr5 130878497 130879090 -68751060 - L2 LINE L2 -960 2354 1713 420 360 102 16 chr5 130879092 130879522 -68750628 - L2 LINE L2 -2310 1004 538 804 174 7 14 chr5 130879527 130879702 -68750448 - AluJb SINE Alu 0 312 139 432 326 92 43 chr5 130879743 130880111 -68750039 - L2 LINE L2 -2834 480 95 44 63 0 0 chr5 130881445 130881524 -68748626 + AT_rich Low_complexity Low_complexity 1 79 0 34 42 0 0 chr5 130881548 130881596 -68748554 + AT_rich Low_complexity Low_complexity 1 48 0 25 51 0 0 chr5 130881654 130881693 -68748457 + AT_rich Low_complexity Low_complexity 1 39 0 1121 127 26 11 chr5 130883343 130883532 -68746618 + L1MA7 LINE L1 5955 6146 -145 201 94 0 0 chr5 130883537 130883569 -68746581 + (CA)n Simple_repeat Simple_repeat 1 32 0 324 307 83 40 chr5 130885441 130885718 -68744432 + L1ME4a LINE L1 5746 6034 -87 401 362 73 12 chr5 130888444 130888690 -68741460 - HAL1 LINE L1 -1095 1412 1152 251 226 82 57 chr5 130888699 130888858 -68741292 - L1MDa LINE L1 -5104 1436 1274 405 291 106 91 chr5 130889012 130889266 -68740884 + MIR SINE MIR 3 260 -2 627 281 7 0 chr5 130891259 130891412 -68738738 + MIR SINE MIR 57 210 -52 2450 65 7 3 chr5 130891465 130891774 -68738376 - AluY SINE Alu -1 310 1 264 30 0 0 chr5 130892451 130892484 -68737666 + (GA)n Simple_repeat Simple_repeat 2 34 0 2069 133 7 0 chr5 130892896 130893196 -68736954 + AluSq SINE Alu 1 302 -11 693 203 135 36 chr5 130893251 130893473 -68736677 - MLT1D LTR MaLR -2 503 260 2042 176 63 18 chr5 130893528 130893926 -68736224 + MLT2C2 LTR ERVL 1 416 -48 353 177 13 0 chr5 130893928 130894007 -68736143 + CT-rich Low_complexity Low_complexity 1 80 0 250 133 22 0 chr5 130894028 130894073 -68736077 + MLT2C2 LTR ERVL 399 444 0 * 298 255 31 133 chr5 130894073 130894251 -68735899 - MLT1D LTR MaLR -347 158 1 8345 193 17 5 chr5 130894541 130897100 -68733050 + L1PB4 LINE L1 3562 6147 -9 233 69 0 0 chr5 130897133 130897162 -68732988 - L1PA5 LINE L1 -17 6137 6109 1245 183 110 55 chr5 130898165 130898510 -68731640 - MLT1A1 LTR MaLR -1 364 1 242 345 129 12 chr5 130898786 130898957 -68731193 - MIR SINE MIR -18 244 54 320 309 24 32 chr5 130900899 130901022 -68729128 - MIR SINE MIR -57 151 30 546 270 5 82 chr5 130902107 130902303 -68727847 - L2 LINE L2 -2838 476 296 222 293 57 32 chr5 130903391 130903514 -68726636 + L2 LINE L2 3188 3313 0 767 155 9 0 chr5 130903919 130904035 -68726115 + FLAM_C SINE Alu 1 117 -16 38 0 0 0 chr5 130904036 130904074 -68726076 + AT_rich Low_complexity Low_complexity 1 38 0 205 85 0 64 chr5 130905568 130905615 -68724535 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 336 24 0 0 chr5 130906088 130906129 -68724021 + (TG)n Simple_repeat Simple_repeat 2 42 0 4335 151 58 16 chr5 130906130 130907351 -68722799 - L1MA7 LINE L1 -502 5789 4512 2364 148 26 30 chr5 130907351 130907842 -68722308 + L1MA7 LINE L1 5794 6290 -1 1657 129 4 0 chr5 130907843 130908076 -68722074 - AluSx SINE Alu -17 295 62 638 164 9 0 chr5 130908077 130908193 -68721957 + L1M2 LINE L1 5473 5589 -702 281 163 0 0 chr5 130908193 130908236 -68721914 - Alu SINE Alu -259 43 1 230 267 60 60 chr5 130908345 130908495 -68721655 - MIR SINE MIR -57 205 56 2053 144 0 0 chr5 130908615 130908921 -68721229 - AluSx SINE Alu -6 306 1 262 330 42 34 chr5 130909458 130909576 -68720574 + MIR SINE MIR 72 190 -72 197 280 0 0 chr5 130910676 130910726 -68719424 + L2 LINE L2 2925 2974 -298 183 80 0 0 chr5 130910851 130910876 -68719274 + (T)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr5 130911119 130911140 -68719010 + AT_rich Low_complexity Low_complexity 1 21 0 2505 24 0 0 chr5 130911367 130911658 -68718492 + L1PA3 LINE L1 5862 6152 -3 26 30 0 0 chr5 130911658 130911691 -68718459 + AT_rich Low_complexity Low_complexity 1 33 0 236 228 0 0 chr5 130912341 130912398 -68717752 - L1MC4 LINE L1 -1339 6703 6647 664 321 73 0 chr5 130912503 130912721 -68717429 - MIR SINE MIR -1 261 28 388 333 126 13 chr5 130914127 130914358 -68715792 + MIR SINE MIR 3 259 -3 459 118 0 0 chr5 130914584 130914660 -68715490 + (CA)n Simple_repeat Simple_repeat 2 77 0 266 316 115 7 chr5 130915276 130915347 -68714803 + MIR SINE MIR 74 136 -126 1715 211 70 84 chr5 130915347 130916000 -68714150 - LTR48B LTR ERV1 0 644 1 266 316 115 7 chr5 130916000 130916067 -68714083 + MIR SINE MIR 136 227 -35 2264 134 20 3 chr5 130916071 130916429 -68713721 + THE1B LTR MaLR 1 364 0 235 156 0 0 chr5 130917399 130917444 -68712706 - LTR66 LTR ERVL -172 438 394 608 118 11 0 chr5 130917467 130917588 -68712562 + L1PA10 LINE L1 6060 6181 0 793 145 41 0 chr5 130918809 130918954 -68711196 + L1MA6 LINE L1 6089 6239 -61 1159 96 18 6 chr5 130918955 130919122 -68711028 - MER4E LTR ERV1 0 779 611 212 250 0 0 chr5 130919127 130919191 -68710959 + (TTAA)n Simple_repeat Simple_repeat 4 67 0 380 193 103 3 chr5 130919208 130919324 -68710826 + MER4E LTR ERV1 389 683 -96 * 2042 127 14 93 chr5 130919312 130919729 -68710421 - MER4B LTR ERV1 -225 385 2 382 123 0 0 chr5 130919729 130919794 -68710356 + L1MA7 LINE L1 6227 6291 0 8826 26 1 0 chr5 130920006 130921087 -68709063 - L1PA3 LINE L1 -2841 3305 2224 17266 29 5 0 chr5 130921087 130923933 -68706217 + L1PA3 LINE L1 3309 6152 -3 29 0 0 0 chr5 130923933 130923962 -68706188 + AT_rich Low_complexity Low_complexity 1 29 0 384 77 0 0 chr5 130925662 130925714 -68704436 + (CA)n Simple_repeat Simple_repeat 2 53 0 186 283 274 0 chr5 130926156 130926262 -68703888 + MIR SINE MIR 122 256 -6 3110 145 8 0 chr5 130927195 130927684 -68702466 - LOR1a LTR ERV1 -4 493 1 232 360 64 0 chr5 130928093 130928218 -68701932 - MIR SINE MIR -48 214 82 4268 212 67 101 chr5 130929064 130930737 -68699413 + L1MC4a LINE L1 5975 7604 -204 1664 144 4 0 chr5 130930737 130930987 -68699163 - AluY SINE Alu -26 285 35 4268 212 67 101 chr5 130930987 130931184 -68698966 + L1MC4a LINE L1 7604 7806 -2 1296 184 7 55 chr5 130932203 130932272 -68697878 - L1MD1 LINE L1 0 6242 6171 2317 65 7 10 chr5 130932272 130932579 -68697571 + AluY SINE Alu 1 306 -5 1296 184 7 55 chr5 130932579 130932818 -68697332 - L1MD1 LINE L1 -71 6171 5949 334 323 36 62 chr5 130932996 130933188 -68696962 + MIR SINE MIR 39 225 -37 1884 63 4 52 chr5 130934739 130935010 -68695140 - AluY SINE Alu -18 293 36 417 287 40 46 chr5 130935166 130935340 -68694810 - MIR SINE MIR 0 262 90 182 0 107 0 chr5 130935746 130935774 -68694376 + T-rich Low_complexity Low_complexity 6 36 0 1400 115 43 16 chr5 130936013 130936266 -68693884 - L1MA8 LINE L1 -5 6286 6027 206 191 24 0 chr5 130939731 130939773 -68690377 + CT-rich Low_complexity Low_complexity 1 43 0 624 221 37 58 chr5 130940984 130941174 -68688976 - L2 LINE L2 -50 3263 3078 24 53 0 0 chr5 130942016 130942054 -68688096 + AT_rich Low_complexity Low_complexity 1 38 0 22 70 0 0 chr5 130942890 130942933 -68687217 + AT_rich Low_complexity Low_complexity 1 43 0 54 16 0 0 chr5 130945465 130945526 -68684624 + AT_rich Low_complexity Low_complexity 1 61 0 464 287 98 12 chr5 130946139 130946303 -68683847 + MER5B DNA MER1_type 1 178 0 391 284 139 41 chr5 130946441 130946619 -68683531 - MIR SINE MIR -25 237 41 187 320 20 0 chr5 130946619 130946669 -68683481 + MER5A DNA MER1_type 4 54 -135 540 256 32 32 chr5 130946904 130947060 -68683090 - MER5A DNA MER1_type -32 157 2 752 44 0 0 chr5 130948953 130949043 -68681107 + 5S rRNA rRNA 1 90 -31 457 267 0 0 chr5 130949069 130949170 -68680980 + MIR SINE MIR 132 232 -30 489 308 77 26 chr5 130951844 130952039 -68678111 - MIR3 SINE MIR 0 208 4 2107 181 40 7 chr5 130952398 130952802 -68677348 + MSTB LTR MaLR 6 422 -4 308 221 35 0 chr5 130952981 130953067 -68677083 - L1MC4 LINE L1 -1340 6702 6614 287 211 0 56 chr5 130952989 130953079 -68677071 + L1MC4 LINE L1 6619 6703 -1339 * 335 264 64 8 chr5 130953522 130953647 -68676503 + MER94 DNA DNA 3 134 0 366 317 24 8 chr5 130953678 130953801 -68676349 - MIR SINE MIR -118 144 20 21 71 0 0 chr5 130954649 130954691 -68675459 + AT_rich Low_complexity Low_complexity 1 42 0 222 91 0 0 chr5 130955033 130955066 -68675084 + (A)n Simple_repeat Simple_repeat 1 33 0 735 240 14 41 chr5 130955085 130955306 -68674844 + MIR SINE MIR 7 221 -41 204 216 0 0 chr5 130955313 130955350 -68674800 + GA-rich Low_complexity Low_complexity 2 38 0 316 333 9 19 chr5 130955407 130955512 -68674638 + MER91A DNA MER1_type 71 174 -22 263 227 15 30 chr5 130955664 130955730 -68674420 - MER5A DNA MER1_type -1 188 124 189 283 0 17 chr5 130956513 130956573 -68673577 - L2 LINE L2 -1 3312 3254 243 88 0 0 chr5 130956709 130956743 -68673407 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1892 160 77 0 chr5 130957865 130958178 -68671972 - MER1B DNA MER1_type -2 337 1 2202 68 65 7 chr5 130958326 130958618 -68671532 + AluY SINE Alu 1 309 -2 2040 130 0 7 chr5 130959008 130959307 -68670843 - AluSx SINE Alu -14 298 2 508 101 38 0 chr5 130959330 130959409 -68670741 + L1PA7 LINE L1 6070 6151 -3 451 188 0 0 chr5 130959549 130959629 -68670521 + AluJ/FLAM SINE Alu 1 80 -232 1002 218 0 0 chr5 130959788 130959967 -68670183 + AluJo SINE Alu 104 282 -30 435 83 0 0 chr5 130959967 130960027 -68670123 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 275 130 19 0 chr5 130961103 130961157 -68668993 + GA-rich Low_complexity Low_complexity 2 56 0 281 260 52 0 chr5 130961290 130961386 -68668764 + MER94 DNA DNA 1 101 -33 225 0 0 0 chr5 130962780 130962805 -68667345 + (TG)n Simple_repeat Simple_repeat 1 25 0 2109 205 42 34 chr5 130962858 130963410 -68666740 + L1MA10 LINE L1 5776 6331 -3 26 30 0 0 chr5 130964186 130964219 -68665931 + AT_rich Low_complexity Low_complexity 1 33 0 203 353 42 17 chr5 130964229 130964348 -68665802 + MIR SINE MIR 20 141 -67 427 329 201 22 chr5 130965601 130966018 -68664132 + L2 LINE L2 2277 2768 -546 542 296 58 6 chr5 130966056 130966228 -68663922 - MIR SINE MIR -56 206 26 406 253 12 0 chr5 130966307 130966390 -68663760 + L2 LINE L2 3187 3270 -43 382 298 174 21 chr5 130966536 130966778 -68663372 + L2 LINE L2 3031 3309 -4 215 323 21 68 chr5 130966854 130967046 -68663104 - L2 LINE L2 0 3313 3131 720 160 68 143 chr5 130967208 130967445 -68662705 + MER20 DNA MER1_type 1 219 0 2369 109 0 0 chr5 130968040 130968352 -68661798 + AluSx SINE Alu 1 312 0 399 286 55 82 chr5 130968517 130968772 -68661378 - MIR SINE MIR -9 253 6 254 277 0 12 chr5 130969602 130969685 -68660465 + (TA)n Simple_repeat Simple_repeat 2 83 0 268 257 18 0 chr5 130969722 130969835 -68660315 + (TA)n Simple_repeat Simple_repeat 2 116 0 335 321 139 72 chr5 130970493 130971138 -68659012 - L2 LINE L2 -14 3258 2554 23 33 0 0 chr5 130971343 130971373 -68658777 + AT_rich Low_complexity Low_complexity 1 30 0 438 313 126 0 chr5 130971802 130972016 -68658134 - L3 LINE CR1 -214 1363 1123 507 230 78 150 chr5 130972099 130972547 -68657603 - Charlie8 DNA MER1_type -1929 488 73 1255 183 8 119 chr5 130973414 130973785 -68656365 - MER7A DNA MER2_type -1 345 18 1065 210 119 49 chr5 130977960 130978259 -68651891 - L1ME3A LINE L1 -234 5936 5603 873 129 0 0 chr5 130978259 130978398 -68651752 + (TA)n Simple_repeat Simple_repeat 1 139 0 1065 210 119 49 chr5 130978398 130978484 -68651666 - L1ME3A LINE L1 -567 5603 5524 5381 155 27 30 chr5 130978872 130979332 -68650818 + L1MA6 LINE L1 4292 4752 -1548 2696 116 7 25 chr5 130979332 130979763 -68650387 - MSTA LTR MaLR -1 427 5 5381 155 27 30 chr5 130979763 130981315 -68648835 + L1MA6 LINE L1 4752 6299 -1 2205 105 0 0 chr5 130981330 130981644 -68648506 - AluSq SINE Alu 0 314 1 1271 187 9 4 chr5 130982096 130982321 -68647829 - MSTB LTR MaLR 0 426 201 5434 102 10 0 chr5 130982409 130983693 -68646457 - L1PA13 LINE L1 -5 6158 4906 531 136 0 0 chr5 130983697 130983778 -68646372 - MSTB-int LTR MaLR -1570 81 1 2348 151 36 12 chr5 130983778 130984194 -68645956 - MSTB LTR MaLR 0 426 1 300 264 264 26 chr5 130984484 130984677 -68645473 + L1ME4a LINE L1 5881 6119 -2 30 0 0 0 chr5 130984929 130984959 -68645191 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 130987338 130987360 -68642790 + AT_rich Low_complexity Low_complexity 1 22 0 2729 208 29 45 chr5 130987879 130988437 -68641713 + L1 LINE L1 3362 3905 -2241 2281 86 7 13 chr5 130988437 130988738 -68641412 + AluSx SINE Alu 1 299 -13 2729 208 29 45 chr5 130988738 130988949 -68641201 + L1 LINE L1 3905 4118 -2028 366 295 107 7 chr5 130990835 130990984 -68639166 - MIR SINE MIR -56 206 43 229 318 16 0 chr5 130991048 130991111 -68639039 - L2 LINE L2 -5 3267 3204 369 318 45 17 chr5 130992012 130992188 -68637962 - MIR3 SINE MIR -11 197 17 21 0 0 0 chr5 130993872 130993893 -68636257 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr5 130994059 130994091 -68636059 + AT_rich Low_complexity Low_complexity 1 32 0 357 339 76 0 chr5 130994220 130994338 -68635812 - MIR SINE MIR -79 183 57 257 51 26 0 chr5 130995285 130995324 -68634826 + (TG)n Simple_repeat Simple_repeat 2 41 0 1964 113 14 7 chr5 130996587 130996897 -68633253 + AluSq SINE Alu 1 312 0 4815 176 19 20 chr5 130997081 130997925 -68632225 - L1PA15 LINE L1 -36 6129 5286 1933 152 146 8 chr5 130997925 130998301 -68631849 - MSTA LTR MaLR 0 428 1 4815 176 19 20 chr5 130998301 130998612 -68631538 - L1PA15 LINE L1 -879 5286 4976 309 346 42 27 chr5 130998740 130999003 -68631147 + MLT2D LTR ERVL 91 357 -57 351 65 0 0 chr5 130999036 130999082 -68631068 + (TA)n Simple_repeat Simple_repeat 2 47 0 22 0 0 0 chr5 130999842 130999864 -68630286 + AT_rich Low_complexity Low_complexity 1 22 0 1902 145 3 26 chr5 131000838 131001141 -68629009 - AluSx SINE Alu -13 299 4 422 297 21 28 chr5 131002168 131002313 -68627837 + MIR SINE MIR 2 145 -117 485 274 17 0 chr5 131002653 131002807 -68627343 - L1P LINE L1 -1016 5130 4971 2047 142 46 22 chr5 131002807 131003173 -68626977 + THE1C LTR MaLR 1 375 0 9703 122 40 12 chr5 131003173 131004710 -68625440 + THE1C-int LTR MaLR 1 1580 0 831 156 143 0 chr5 131004883 131005037 -68625113 + THE1C LTR MaLR 200 375 0 6465 234 22 0 chr5 131005039 131006577 -68623573 - L1P LINE L1 -1173 4973 3402 265 345 86 14 chr5 131007155 131007294 -68622856 - MIR SINE MIR -94 168 20 184 0 30 61 chr5 131007307 131007340 -68622810 + (TAAAAA)n Simple_repeat Simple_repeat 4 35 0 25 0 0 0 chr5 131007932 131007957 -68622193 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr5 131008188 131008208 -68621942 + (TA)n Simple_repeat Simple_repeat 2 21 0 282 310 96 54 chr5 131008279 131008518 -68621632 - MIR SINE MIR -12 250 2 35 54 0 0 chr5 131009675 131009731 -68620419 + AT_rich Low_complexity Low_complexity 1 56 0 276 269 109 34 chr5 131010701 131010820 -68619330 - MIR3 SINE MIR -67 141 14 234 0 0 0 chr5 131011489 131011515 -68618635 + (A)n Simple_repeat Simple_repeat 1 26 0 1301 318 36 69 chr5 131012006 131012945 -68617205 + L2 LINE L2 2414 3309 -4 370 306 121 33 chr5 131014313 131014643 -68615507 + LTR16A LTR ERVL 11 369 -81 222 37 0 0 chr5 131016472 131016499 -68613651 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 22 0 0 0 chr5 131017527 131017549 -68612601 + AT_rich Low_complexity Low_complexity 1 22 0 485 328 32 47 chr5 131018112 131018365 -68611785 + MIR SINE MIR 14 262 0 370 306 11 22 chr5 131018569 131018749 -68611401 + GA-rich Low_complexity Low_complexity 1 178 0 281 308 48 27 chr5 131018864 131019010 -68611140 + MLT1K LTR MaLR 395 543 -45 3373 47 16 0 chr5 131019099 131019525 -68610625 - L1P LINE L1 -1163 4983 4551 * 3901 92 7 15 chr5 131019524 131020111 -68610039 + L1PA5 LINE L1 5550 6131 -23 273 307 154 64 chr5 131020431 131020608 -68609542 + L2 LINE L2 2549 2709 -604 1834 187 5 16 chr5 131020608 131020977 -68609173 + MLT1A1 LTR MaLR 1 365 0 273 307 154 64 chr5 131020977 131021309 -68608841 + L2 LINE L2 2709 3089 -224 206 289 47 101 chr5 131022497 131022795 -68607355 - L2 LINE L2 -668 2646 2365 2086 152 46 38 chr5 131022958 131023411 -68606739 - MSTB2 LTR MaLR 0 457 1 309 242 0 0 chr5 131023998 131024089 -68606061 + (CATATA)n Simple_repeat Simple_repeat 6 96 0 195 276 197 24 chr5 131024498 131024625 -68605525 + MIR3 SINE MIR 19 167 -41 701 349 112 8 chr5 131025259 131025769 -68604381 - L2 LINE L2 -421 2893 2331 205 384 66 25 chr5 131025772 131026165 -68603985 - L2 LINE L2 -1650 1664 1256 22 0 0 0 chr5 131027208 131027230 -68602920 + AT_rich Low_complexity Low_complexity 1 22 0 196 299 112 28 chr5 131027676 131027783 -68602367 - L2 LINE L2 -1 3271 3156 1422 210 14 18 chr5 131029116 131029397 -68600753 + AluJo SINE Alu 2 281 -31 537 275 114 58 chr5 131029797 131030448 -68599702 + HAL1 LINE L1 993 1679 -828 4886 196 87 5 chr5 131030469 131031639 -68598511 + L1PA13 LINE L1 4138 5403 -743 4429 104 47 39 chr5 131031770 131032518 -68597632 + L1PA13 LINE L1 5406 6159 -4 21 36 0 0 chr5 131032526 131032554 -68597596 + AT_rich Low_complexity Low_complexity 1 28 0 291 215 0 0 chr5 131032575 131032640 -68597510 + GA-rich Low_complexity Low_complexity 3 67 0 233 303 34 0 chr5 131032721 131032810 -68597340 + HAL1 LINE L1 1829 1920 -587 1982 129 0 3 chr5 131032908 131033195 -68596955 + AluSc SINE Alu 1 286 -23 4810 105 12 7 chr5 131033206 131033949 -68596201 + L1PA7 LINE L1 4265 5011 -1135 486 222 42 28 chr5 131034156 131034368 -68595782 + L1PA7 LINE L1 5042 5256 -890 6699 71 5 1 chr5 131034372 131035263 -68594887 + L1PA7 LINE L1 5261 6154 0 245 337 69 0 chr5 131035346 131035447 -68594703 + MIR SINE MIR 137 244 -18 25 51 0 0 chr5 131035827 131035866 -68594284 + AT_rich Low_complexity Low_complexity 1 39 0 719 276 31 8 chr5 131036816 131037070 -68593080 - L1 LINE L1 -975 5171 4912 5822 258 44 29 chr5 131037198 131040840 -68589310 - L1PA13 LINE L1 -2681 4116 1 451 233 19 10 chr5 131041081 131041184 -68588966 + MER5A DNA MER1_type 9 112 -77 185 88 29 29 chr5 131041176 131041210 -68588940 - MER5A DNA MER1_type -114 75 42 * 2154 85 7 0 chr5 131042706 131042987 -68587163 - AluSc SINE Alu 0 309 27 26 0 0 0 chr5 131045345 131045371 -68584779 + AT_rich Low_complexity Low_complexity 1 26 0 438 216 18 9 chr5 131045371 131045482 -68584668 - L1MA9 LINE L1 -38 6274 6163 1684 145 37 10 chr5 131046969 131047265 -68582885 + AluSg SINE Alu 1 304 -6 853 212 35 49 chr5 131047277 131047503 -68582647 + AluJo SINE Alu 6 228 -84 308 219 80 7 chr5 131047743 131047880 -68582270 - L1 LINE L1 -3598 2548 2402 * 549 133 22 0 chr5 131047869 131047959 -68582191 + L1PB1 LINE L1 5145 5236 -910 * 661 171 0 16 chr5 131047940 131048063 -68582087 + L1P5 LINE L1 5520 5640 -511 4286 116 26 16 chr5 131048063 131048749 -68581401 + L1PB1 LINE L1 5444 6151 0 310 207 122 0 chr5 131048757 131048839 -68581311 - L1 LINE L1 -2837 3309 3218 4179 163 56 9 chr5 131048842 131049249 -68580901 + L1MA9 LINE L1 5168 5554 -758 2481 102 16 31 chr5 131049249 131049285 -68580865 + THE1C LTR MaLR 1 36 -339 1614 203 7 0 chr5 131049285 131049595 -68580555 - AluSx SINE Alu 0 312 1 2481 102 16 31 chr5 131049595 131049939 -68580211 + THE1C LTR MaLR 36 375 0 4179 163 56 9 chr5 131049939 131050416 -68579734 + L1MA9 LINE L1 5554 6092 -220 28 29 0 0 chr5 131051449 131051484 -68578666 + AT_rich Low_complexity Low_complexity 1 35 0 24 53 0 0 chr5 131052227 131052265 -68577885 + AT_rich Low_complexity Low_complexity 1 38 0 1573 98 0 0 chr5 131052303 131052506 -68577644 + AluSg SINE Alu 1 203 -107 278 281 89 30 chr5 131054248 131054383 -68575767 + MIR SINE MIR 88 230 -32 1160 186 95 8 chr5 131054636 131054888 -68575262 + MER21A LTR ERV1 2 275 -656 * 2143 175 89 4 chr5 131054882 131055309 -68574841 + MER21A LTR ERV1 377 925 -6 497 198 0 0 chr5 131055634 131055715 -68574435 - Tigger5 DNA MER2_type -2 2321 2241 1184 187 105 45 chr5 131055727 131055994 -68574156 - AluJo SINE Alu -24 288 6 1150 96 0 0 chr5 131055994 131056151 -68573999 - Tigger5 DNA MER2_type -95 2228 2072 248 273 0 23 chr5 131056151 131056239 -68573911 + (TA)n Simple_repeat Simple_repeat 2 87 0 198 71 0 0 chr5 131056242 131056270 -68573880 + (CA)n Simple_repeat Simple_repeat 1 28 0 1817 143 127 16 chr5 131057593 131057978 -68572172 + MSTA LTR MaLR 1 428 0 7579 181 114 1 chr5 131057978 131059462 -68570688 + MSTA-int LTR MaLR 1 1651 0 1849 152 152 8 chr5 131059462 131059836 -68570314 + MSTA LTR MaLR 1 428 0 196 356 132 24 chr5 131059851 131060140 -68570010 - L2 LINE L2 -108 3164 2845 238 311 113 33 chr5 131060277 131060428 -68569722 + LTR67 LTR ERVL 110 272 -285 380 271 33 33 chr5 131060528 131060679 -68569471 + LTR67 LTR ERVL 400 550 -7 406 258 189 25 chr5 131062458 131062702 -68567448 - L1ME4a LINE L1 -226 5895 5612 24 91 0 0 chr5 131063189 131063255 -68566895 + AT_rich Low_complexity Low_complexity 1 66 0 210 349 15 0 chr5 131063726 131063792 -68566358 - MIR SINE MIR -114 94 28 1487 226 15 12 chr5 131064155 131064482 -68565668 + MLT2D LTR ERVL 1 328 -86 29 0 0 0 chr5 131064649 131064678 -68565472 + AT_rich Low_complexity Low_complexity 1 29 0 624 249 92 57 chr5 131064683 131064964 -68565186 + AluJb SINE Alu 5 295 -7 23 0 0 0 chr5 131065739 131065762 -68564388 + AT_rich Low_complexity Low_complexity 1 23 0 267 370 22 0 chr5 131065849 131065987 -68564163 - L2 LINE L2 -380 2934 2794 489 279 68 89 chr5 131066333 131066816 -68563334 + L1MC4a LINE L1 4861 5333 -813 408 290 78 37 chr5 131066946 131067295 -68562855 + L1MC4a LINE L1 5525 5814 -307 5365 48 3 5 chr5 131067381 131068043 -68562107 + L1PA6 LINE L1 5490 6150 -4 186 43 0 0 chr5 131068784 131068807 -68561343 + (TG)n Simple_repeat Simple_repeat 1 23 0 382 337 45 30 chr5 131069364 131069566 -68560584 - MIR SINE MIR -37 225 21 246 105 0 0 chr5 131069587 131069625 -68560525 + (GA)n Simple_repeat Simple_repeat 1 38 0 216 216 11 45 chr5 131069633 131069721 -68560429 + GA-rich Low_complexity Low_complexity 1 85 0 223 250 0 0 chr5 131069907 131069951 -68560199 + polypurine Low_complexity Low_complexity 4 47 0 483 96 0 0 chr5 131069989 131070062 -68560088 + Alu SINE Alu 239 311 0 886 239 70 6 chr5 131070104 131070505 -68559645 + L1ME LINE L1 5130 5553 -611 3986 42 16 0 chr5 131070505 131071004 -68559146 - L1PA4 LINE L1 -3 6152 5646 10292 42 0 2 chr5 131071004 131072287 -68557863 + L1P LINE L1 1308 2588 -3558 421 350 42 42 chr5 131072309 131072526 -68557624 + MIR SINE MIR 8 224 -38 252 285 46 31 chr5 131073444 131073574 -68556576 - MER4E LTR ERV1 -360 406 275 323 261 0 0 chr5 131073774 131073843 -68556307 + CT-rich Low_complexity Low_complexity 1 69 0 268 360 29 29 chr5 131074256 131074431 -68555719 + L2 LINE L2 2583 2757 -557 279 71 0 0 chr5 131075153 131075195 -68554955 + (CA)n Simple_repeat Simple_repeat 2 43 0 580 270 108 10 chr5 131075539 131075743 -68554407 + MER58A DNA MER1_type 1 224 0 509 287 22 0 chr5 131075746 131075882 -68554268 - MIR SINE MIR -65 197 59 694 200 40 20 chr5 131075943 131076093 -68554057 + MSTD LTR MaLR 1 153 -243 1321 115 11 0 chr5 131076110 131076301 -68553849 + AluSp SINE Alu 112 304 -9 972 174 37 5 chr5 131076309 131076499 -68553651 + MSTD LTR MaLR 201 396 0 572 160 10 10 chr5 131076923 131077023 -68553127 - L2 LINE L2 0 3313 3214 21 0 0 0 chr5 131077805 131077826 -68552324 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr5 131078502 131078537 -68551613 + AT_rich Low_complexity Low_complexity 1 35 0 1631 202 0 0 chr5 131078618 131078922 -68551228 + AluJb SINE Alu 1 304 0 2447 204 10 22 chr5 131078997 131079580 -68550570 + L1P LINE L1 3614 4189 -1957 6367 182 13 7 chr5 131079709 131081883 -68548267 + L1PA15 LINE L1 3977 6164 -1 187 227 0 23 chr5 131082277 131082321 -68547829 + L2 LINE L2 3267 3309 -4 375 319 44 7 chr5 131082945 131083080 -68547070 - MIR SINE MIR 0 262 123 1504 254 28 12 chr5 131083783 131084209 -68545941 + L1MC1 LINE L1 3724 4156 -1990 950 180 5 30 chr5 131084209 131084409 -68545741 + AluJo SINE Alu 118 312 0 487 231 46 0 chr5 131084409 131084539 -68545611 + L1MC1 LINE L1 4169 4304 -1842 5021 194 33 35 chr5 131084550 131084676 -68545474 + L1MC1 LINE L1 4737 4862 -1471 2330 45 0 48 chr5 131084676 131084986 -68545164 - AluY SINE Alu -16 295 1 5021 194 33 35 chr5 131084986 131086444 -68543706 + L1MC1 LINE L1 4862 6315 -18 2257 68 0 7 chr5 131086699 131086992 -68543158 - AluY SINE Alu -20 291 1 21 36 0 0 chr5 131087040 131087068 -68543082 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 131087189 131087211 -68542939 + AT_rich Low_complexity Low_complexity 1 22 0 2119 38 0 4 chr5 131089155 131089416 -68540734 - L1PA4 LINE L1 -11 6144 5885 1151 126 11 0 chr5 131091848 131092022 -68538128 + L1PA12 LINE L1 5978 6153 -15 22 0 0 0 chr5 131093148 131093170 -68536980 + AT_rich Low_complexity Low_complexity 1 22 0 198 224 0 0 chr5 131094144 131094193 -68535957 + (CATATA)n Simple_repeat Simple_repeat 3 51 0 2019 138 17 0 chr5 131094286 131094634 -68535516 + L1MA8 LINE L1 5938 6291 0 301 304 257 25 chr5 131094660 131095140 -68535010 + L2 LINE L2 2707 3313 0 2263 105 0 0 chr5 131095408 131095703 -68534447 - AluSc SINE Alu -14 295 1 22 99 0 0 chr5 131095982 131096053 -68534097 + AT_rich Low_complexity Low_complexity 1 71 0 27 0 0 0 chr5 131096068 131096095 -68534055 + AT_rich Low_complexity Low_complexity 1 27 0 525 276 291 36 chr5 131096230 131096666 -68533484 + L2 LINE L2 2778 3313 0 281 303 11 11 chr5 131097128 131097217 -68532933 + MER5B DNA MER1_type 4 92 -86 5333 176 17 6 chr5 131097246 131098370 -68531780 + L1MA4 LINE L1 5166 6300 0 1916 197 19 35 chr5 131098381 131098473 -68531677 + L1MA7 LINE L1 5813 5905 -386 3414 180 15 86 chr5 131098473 131098956 -68531194 + MER44D DNA MER2_type 1 517 -1970 1732 194 0 3 chr5 131098956 131099255 -68530895 + AluJb SINE Alu 7 304 -8 3414 180 15 86 chr5 131099255 131099526 -68530624 + MER44D DNA MER2_type 517 571 -1916 2050 154 0 6 chr5 131099526 131099838 -68530312 + AluSg SINE Alu 1 310 0 3414 180 15 86 chr5 131099838 131099871 -68530279 + MER44D DNA MER2_type 571 605 0 1916 197 19 35 chr5 131099871 131100265 -68529885 + L1MA7 LINE L1 5905 6291 0 2234 111 39 33 chr5 131100313 131100675 -68529475 + THE1B LTR MaLR 1 364 0 450 278 92 0 chr5 131100743 131100916 -68529234 + LTR37A LTR ERV1 226 414 -12 2892 10 0 0 chr5 131100932 131101246 -68528904 - AluYb8 SINE Alu -4 314 1 22 0 0 0 chr5 131101246 131101268 -68528882 + AT_rich Low_complexity Low_complexity 1 22 0 419 333 47 12 chr5 131102143 131102314 -68527836 - MER5B DNA MER1_type 0 178 2 437 295 0 0 chr5 131102448 131102560 -68527590 - MIR SINE MIR 0 262 151 374 276 26 26 chr5 131102577 131102693 -68527457 - MIR SINE MIR 0 262 147 488 206 22 0 chr5 131102750 131102842 -68527308 - MER2 DNA MER2_type -249 96 3 542 228 0 18 chr5 131102842 131102956 -68527194 - MIR SINE MIR -119 143 32 25 0 0 0 chr5 131103588 131103613 -68526537 + AT_rich Low_complexity Low_complexity 1 25 0 2203 102 3 10 chr5 131105660 131105954 -68524196 + AluSp SINE Alu 1 292 -21 186 43 0 0 chr5 131106907 131106930 -68523220 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2390 55 10 0 chr5 131108005 131108298 -68521852 - AluY SINE Alu -15 296 1 549 335 34 0 chr5 131108519 131108725 -68521425 - MIR SINE MIR 0 262 50 28 0 0 0 chr5 131108893 131108921 -68521229 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 131109970 131110002 -68520148 + AT_rich Low_complexity Low_complexity 1 32 0 23 54 0 0 chr5 131110844 131110881 -68519269 + AT_rich Low_complexity Low_complexity 1 37 0 216 0 0 0 chr5 131111311 131111335 -68518815 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr5 131112330 131112351 -68517799 + AT_rich Low_complexity Low_complexity 1 21 0 342 289 156 97 chr5 131114597 131115362 -68514788 - L1M2 LINE L1 -5866 983 174 255 125 0 0 chr5 131115491 131115531 -68514619 + (CGG)n Simple_repeat Simple_repeat 1 40 0 494 317 163 47 chr5 131115558 131116195 -68513955 + L1M2 LINE L1 416 1126 -5723 842 183 56 5 chr5 131117325 131117522 -68512628 + MER3 DNA MER1_type 2 208 -1 383 289 122 24 chr5 131117732 131117978 -68512172 - L2 LINE L2 0 3313 3044 238 301 235 0 chr5 131118034 131118170 -68511980 + MIR SINE MIR 85 252 -10 634 293 122 49 chr5 131118250 131118370 -68511780 - L2 LINE L2 -1 3312 3202 330 26 0 0 chr5 131118370 131118409 -68511741 + (CA)n Simple_repeat Simple_repeat 2 40 0 634 293 122 49 chr5 131118409 131118744 -68511406 - L2 LINE L2 -111 3202 2788 960 146 200 46 chr5 131118744 131119024 -68511126 - MER33 DNA MER1_type 0 324 2 634 293 122 49 chr5 131119024 131119218 -68510932 - L2 LINE L2 -525 2788 2610 606 168 52 100 chr5 131120708 131120958 -68509192 + L1MC5 LINE L1 7619 7856 -105 21 36 0 0 chr5 131121366 131121394 -68508756 + AT_rich Low_complexity Low_complexity 1 28 0 538 181 30 38 chr5 131121549 131121682 -68508468 - Charlie5 DNA MER1_type -29 2583 2452 1729 159 14 17 chr5 131121687 131122032 -68508118 + L1MA5 LINE L1 5956 6299 -1 21 0 0 0 chr5 131122052 131122073 -68508077 + AT_rich Low_complexity Low_complexity 1 21 0 185 282 0 10 chr5 131122188 131122291 -68507859 + (TA)n Simple_repeat Simple_repeat 2 103 0 20320 30 5 0 chr5 131122724 131125945 -68504205 + L1PA3 LINE L1 2922 6152 -3 270 172 86 26 chr5 131125959 131126075 -68504075 + Charlie1 DNA MER1_type 2536 2658 -103 2244 103 3 0 chr5 131126212 131126512 -68503638 + AluSx SINE Alu 1 301 -11 6748 63 12 20 chr5 131126609 131128042 -68502108 - L1PA7 LINE L1 -1 6153 4728 14774 100 8 1 chr5 131128042 131130195 -68499955 + L1PA7 LINE L1 2528 4695 -1451 289 235 0 148 chr5 131131235 131131350 -68498800 + MER5A DNA MER1_type 92 189 0 1174 274 58 44 chr5 131131570 131132049 -68498101 - LTR16C LTR ERVL -2 489 4 1637 230 112 44 chr5 131132361 131133201 -68496949 - L1MC5 LINE L1 -48 7913 7017 414 0 0 0 chr5 131133519 131133565 -68496585 + (TA)n Simple_repeat Simple_repeat 2 47 0 204 262 71 79 chr5 131133850 131133976 -68496174 + MIR3 SINE MIR 35 159 -49 545 245 0 0 chr5 131133978 131134076 -68496074 + MER58 DNA MER1_type 2 99 -2321 551 194 10 0 chr5 131134104 131134207 -68495943 + MER58 DNA MER1_type 2317 2420 0 2538 55 3 0 chr5 131134746 131135056 -68495094 - AluY SINE Alu 0 311 1 239 268 12 24 chr5 131135644 131135726 -68494424 + MIR SINE MIR 172 252 -10 2375 67 0 3 chr5 131135785 131136084 -68494066 - AluY SINE Alu -13 298 1 903 246 149 37 chr5 131136157 131136330 -68493820 - L2 LINE L2 -1 3312 3160 2015 93 4 7 chr5 131136330 131136629 -68493521 + AluSc SINE Alu 11 308 0 903 246 149 37 chr5 131136629 131137001 -68493149 - L2 LINE L2 -153 3160 2700 210 241 169 0 chr5 131138846 131138929 -68491221 + MIR SINE MIR 84 180 -82 23 0 0 0 chr5 131139019 131139042 -68491108 + AT_rich Low_complexity Low_complexity 1 23 0 367 317 56 24 chr5 131139162 131139480 -68490670 + MLT1K LTR MaLR 220 581 -7 193 289 77 0 chr5 131139503 131139555 -68490595 + MIR SINE MIR 13 68 -194 26 74 0 0 chr5 131140289 131140343 -68489807 + AT_rich Low_complexity Low_complexity 1 54 0 34 24 0 0 chr5 131140511 131140552 -68489598 + AT_rich Low_complexity Low_complexity 1 41 0 26 30 0 0 chr5 131140720 131140753 -68489397 + AT_rich Low_complexity Low_complexity 1 33 0 952 259 120 52 chr5 131142618 131143168 -68486982 + LTR50 LTR ERVL 3 670 -125 318 182 61 61 chr5 131143365 131143464 -68486686 - MIR SINE MIR -98 164 66 1756 198 161 0 chr5 131143703 131144138 -68486012 + MLT1D LTR MaLR 1 505 0 252 289 24 0 chr5 131144158 131144241 -68485909 + ERVL LTR ERVL 955 1039 -4725 1615 190 102 36 chr5 131144771 131145214 -68484936 - MER70A LTR ERVL 0 472 1 499 163 22 22 chr5 131145500 131145592 -68484558 - AluJ/FLAM SINE Alu -220 92 1 17919 182 11 12 chr5 131148369 131151021 -68479129 - L1PA14 LINE L1 -2 6159 3507 612 40 0 0 chr5 131151021 131151096 -68479054 + (TTTC)n Simple_repeat Simple_repeat 1 75 0 17919 182 11 12 chr5 131151096 131151431 -68478719 - L1PA14 LINE L1 -2654 3507 3173 2001 137 10 3 chr5 131151431 131151759 -68478391 - AluSx SINE Alu 0 330 1 17919 182 11 12 chr5 131151759 131153401 -68476749 - L1PA14 LINE L1 -2988 3173 1531 815 165 12 6 chr5 131153735 131153899 -68476251 - L1MA10 LINE L1 0 6334 6170 662 244 24 5 chr5 131153931 131154144 -68476006 - L1M4 LINE L1 -988 5158 4942 320 191 11 0 chr5 131154181 131154270 -68475880 + CT-rich Low_complexity Low_complexity 1 90 0 180 0 0 0 chr5 131154274 131154294 -68475856 + (TTCC)n Simple_repeat Simple_repeat 3 22 0 1804 149 21 12 chr5 131154742 131155077 -68475073 - L1MA4A LINE L1 -11 6292 5955 313 273 50 33 chr5 131155774 131155895 -68474255 + L1 LINE L1 2272 2394 -3752 38 39 0 0 chr5 131156217 131156269 -68473881 + AT_rich Low_complexity Low_complexity 1 52 0 1664 156 13 43 chr5 131157521 131157823 -68472327 - AluJo SINE Alu -19 293 1 2271 102 3 13 chr5 131157847 131158160 -68471990 - AluSg SINE Alu 0 310 1 423 263 9 20 chr5 131158196 131158316 -68471834 + MIR SINE MIR 38 153 -62 650 348 78 16 chr5 131158456 131159559 -68470591 - ERVL LTR ERVL -380 5384 4131 351 391 26 0 chr5 131159756 131159989 -68470161 - ERVL LTR ERVL -1749 3905 3667 602 336 80 14 chr5 131160242 131160528 -68469622 - ERVL LTR ERVL -2394 3370 3066 1153 337 85 19 chr5 131160622 131161568 -68468582 - ERVL LTR ERVL -2706 2322 1215 711 332 58 50 chr5 131161765 131162329 -68467821 - ERVL LTR ERVL -4066 930 362 1662 247 50 52 chr5 131162664 131163149 -68467001 - LTR16C LTR ERVL 0 491 8 353 223 43 11 chr5 131163149 131163243 -68466907 + MIR SINE MIR 166 262 0 1350 159 0 22 chr5 131163746 131163972 -68466178 - AluJb SINE Alu -7 305 85 576 200 0 0 chr5 131164325 131164500 -68465650 + GA-rich Low_complexity Low_complexity 2 176 0 245 177 16 32 chr5 131164501 131164563 -68465587 + (CAGAGA)n Simple_repeat Simple_repeat 6 66 0 429 281 124 19 chr5 131165918 131166128 -68464022 - MIR SINE MIR -29 233 2 321 322 164 34 chr5 131166566 131167072 -68463078 + L2 LINE L2 2571 3201 -112 355 275 147 24 chr5 131167435 131167646 -68462504 + L3 LINE CR1 1338 1574 -3 403 286 103 18 chr5 131167769 131167912 -68462238 + MIR SINE MIR 28 179 -29 242 318 41 77 chr5 131168609 131168779 -68461371 + MIR3 SINE MIR 21 184 -24 887 302 152 10 chr5 131168896 131169310 -68460840 - L2 LINE L2 0 3313 2841 331 244 81 0 chr5 131169322 131169445 -68460705 - LTR33 LTR ERVL -5 516 384 730 291 36 5 chr5 131169530 131169750 -68460400 - LTR33 LTR ERVL -276 245 19 226 304 14 0 chr5 131169756 131169825 -68460325 - L2 LINE L2 -463 2851 2782 262 226 148 26 chr5 131169836 131169951 -68460199 - L1MC4 LINE L1 0 8042 7914 2946 273 112 30 chr5 131169993 131171273 -68458877 - L2 LINE L2 -1807 1507 38 190 342 71 19 chr5 131172762 131172917 -68457233 + MIR SINE MIR 1 163 -99 411 288 107 63 chr5 131175221 131175634 -68454516 + L2 LINE L2 2155 2585 -729 338 368 132 32 chr5 131175666 131176108 -68454042 + L2 LINE L2 2772 3272 0 23 33 0 0 chr5 131177221 131177251 -68452899 + AT_rich Low_complexity Low_complexity 1 30 0 204 333 28 0 chr5 131179002 131179074 -68451076 + MIR SINE MIR 157 230 -32 610 323 51 0 chr5 131179715 131179910 -68450240 + MIR SINE MIR 57 261 -1 820 156 16 27 chr5 131182426 131182612 -68447538 - L1M4 LINE L1 -727 5451 5268 2865 193 74 8 chr5 131182621 131183260 -68446890 + L1MB7 LINE L1 5488 6168 -16 2079 112 51 51 chr5 131183335 131183710 -68446440 + THE1C LTR MaLR 1 375 0 184 333 0 0 chr5 131183807 131183876 -68446274 + L3b LINE CR1 1362 1430 -153 29 0 0 0 chr5 131183887 131183916 -68446234 + AT_rich Low_complexity Low_complexity 1 29 0 27 49 0 0 chr5 131183997 131184038 -68446112 + AT_rich Low_complexity Low_complexity 1 41 0 285 201 22 179 chr5 131184238 131184422 -68445728 - MER103 DNA DNA 0 166 12 268 343 124 0 chr5 131185431 131185536 -68444614 - L2 LINE L2 -214 3058 2941 192 294 0 0 chr5 131185696 131185747 -68444403 - L2 LINE L2 -669 2645 2595 248 336 18 27 chr5 131185861 131185971 -68444179 + LTR67 LTR ERVL 114 222 -335 1894 143 31 7 chr5 131186602 131186895 -68443255 + AluSx SINE Alu 1 300 -12 2313 111 3 8 chr5 131187472 131187825 -68442325 + L1PB1 LINE L1 5801 6151 0 1008 275 98 61 chr5 131188095 131188608 -68441542 + L1ME3A LINE L1 5254 5747 -423 963 194 28 32 chr5 131188608 131188824 -68441326 + MER20 DNA MER1_type 4 218 -1 1611 192 37 101 chr5 131188827 131189364 -68440786 - MLT1D LTR MaLR -2 503 1 1008 275 98 61 chr5 131189364 131189449 -68440701 + L1ME3A LINE L1 5748 5878 -292 265 277 36 24 chr5 131189709 131189792 -68440358 + LTR67 LTR ERVL 439 522 -35 222 282 195 20 chr5 131189890 131190039 -68440111 - MIR SINE MIR -48 214 40 470 294 188 37 chr5 131190202 131190685 -68439465 - LTR67 LTR ERVL 0 557 2 587 325 108 45 chr5 131191826 131192447 -68437703 + L2 LINE L2 1703 2362 -952 8896 202 17 8 chr5 131192478 131193226 -68436924 - L1PA16 LINE L1 -4 6162 5422 2135 121 3 3 chr5 131193226 131193523 -68436627 - AluSx SINE Alu -15 297 1 8896 202 17 8 chr5 131193523 131196318 -68433832 - L1PA16 LINE L1 -744 5422 2593 1125 235 143 9 chr5 131196340 131196796 -68433354 - Charlie1b DNA MER1_type -6 517 1 337 306 88 48 chr5 131197538 131197685 -68432465 + MER91A DNA MER1_type 17 169 -27 222 245 19 0 chr5 131198337 131198390 -68431760 + (TATG)n Simple_repeat Simple_repeat 3 56 0 1479 189 39 20 chr5 131198556 131198862 -68431288 + AluJb SINE Alu 1 312 0 16508 26 5 0 chr5 131200438 131203159 -68426991 - L1PA4 LINE L1 -11 6144 3415 351 96 0 0 chr5 131203385 131203437 -68426713 + (TG)n Simple_repeat Simple_repeat 2 53 0 24 0 0 0 chr5 131204240 131204264 -68425886 + AT_rich Low_complexity Low_complexity 1 24 0 1322 198 39 164 chr5 131204287 131205076 -68425074 + LTR8A LTR ERV1 34 724 -3 2738 165 21 23 chr5 131205153 131205675 -68424475 + MER21A LTR ERV1 385 905 -26 350 123 35 0 chr5 131205676 131205733 -68424417 + MER21A LTR ERV1 873 931 0 312 310 30 65 chr5 131207541 131207741 -68422409 - MIR SINE MIR -58 204 12 596 312 0 0 chr5 131208302 131208456 -68421694 - MIR3 SINE MIR -1 207 54 24 0 0 0 chr5 131209430 131209454 -68420696 + AT_rich Low_complexity Low_complexity 1 24 0 2175 128 7 0 chr5 131209455 131209761 -68420389 - AluSx SINE Alu -2 310 3 1114 287 90 72 chr5 131210990 131212245 -68417905 - ERVL-F LTR ERVL -4455 1309 1 1690 259 107 25 chr5 131212368 131212936 -68417214 - MLT2F LTR ERVL -41 622 8 1171 246 28 8 chr5 131212945 131213335 -68416815 - L1MCa LINE L1 -3546 2880 2483 1155 141 15 0 chr5 131213348 131213547 -68416603 + L1PBa LINE L1 1 202 -6661 * 6283 100 18 1 chr5 131213546 131214591 -68415559 + L1PBa LINE L1 1110 2320 -4543 9993 114 28 9 chr5 131214594 131216179 -68413971 + L1P5 LINE L1 406 2020 -4842 * 18204 128 12 94 chr5 131216175 131220284 -68409866 + L1PA7 LINE L1 13 3786 -2360 4517 54 35 9 chr5 131220284 131221289 -68408861 + MER11A LTR ERVK 1 1266 0 11119 92 12 33 chr5 131221289 131223679 -68406471 + L1PA7 LINE L1 3781 6152 -2 12557 194 21 23 chr5 131223694 131226378 -68403772 + L1P5 LINE L1 2392 5079 -1788 270 0 0 0 chr5 131226378 131226408 -68403742 + (CAA)n Simple_repeat Simple_repeat 2 31 0 12557 194 21 23 chr5 131226408 131226608 -68403542 + L1P5 LINE L1 5079 5278 -1589 2374 107 0 0 chr5 131226608 131226918 -68403232 + AluY SINE Alu 1 310 -1 12557 194 21 23 chr5 131226918 131228140 -68402010 + L1P5 LINE L1 5278 6507 -360 344 124 22 22 chr5 131228140 131228229 -68401921 + (TA)n Simple_repeat Simple_repeat 2 90 0 207 0 0 0 chr5 131228233 131228256 -68401894 + (TG)n Simple_repeat Simple_repeat 1 23 0 481 284 41 28 chr5 131230710 131231047 -68399103 - L1MCa LINE L1 -5065 1542 991 * 9275 172 87 22 chr5 131231045 131232596 -68397554 - L1M1 LINE L1 -1417 6148 4700 2416 98 0 6 chr5 131232596 131232911 -68397239 - AluSp SINE Alu 0 313 1 9275 172 87 22 chr5 131232911 131234242 -68395908 - L1M1 LINE L1 -2865 4700 3050 973 249 10 0 chr5 131234297 131234506 -68395644 - AluJo SINE Alu -101 211 1 17635 149 30 3 chr5 131234506 131237478 -68392672 - L1M1 LINE L1 -4501 3064 12 2026 130 0 27 chr5 131237760 131238061 -68392089 - AluSx SINE Alu -19 293 1 185 133 0 0 chr5 131239478 131239508 -68390642 + (CA)n Simple_repeat Simple_repeat 2 31 0 2287 107 3 11 chr5 131239508 131239872 -68390278 + L1PB1 LINE L1 5791 6151 0 1251 247 240 34 chr5 131239945 131241087 -68389063 - L1MEc LINE L1 -3973 2453 1077 6658 144 18 6 chr5 131241699 131243430 -68386720 + L1MA7 LINE L1 4091 5843 -448 265 287 93 27 chr5 131244730 131244880 -68385270 - MIR SINE MIR -62 200 41 309 191 160 0 chr5 131245450 131245544 -68384606 - L2 LINE L2 0 3313 3205 205 222 20 111 chr5 131246090 131246158 -68383992 + MIR SINE MIR 146 204 -58 2053 189 68 53 chr5 131246158 131246670 -68383480 - MLT2B1 LTR ERVL 0 520 1 205 222 20 111 chr5 131246670 131246700 -68383450 + MIR SINE MIR 204 235 -27 238 290 83 35 chr5 131246722 131246867 -68383283 - Charlie8 DNA MER1_type -2264 153 2 7044 182 36 50 chr5 131246898 131249778 -68380372 - L1MA4 LINE L1 -6 6294 3436 1690 135 7 0 chr5 131249778 131250059 -68380091 - L1MA2 LINE L1 -7 6297 6015 7044 182 36 50 chr5 131250059 131250270 -68379880 - L1MA4 LINE L1 -2864 3436 3224 301 265 8 150 chr5 131250279 131250532 -68379618 - L2 LINE L2 -61 3252 3036 2012 260 119 48 chr5 131250532 131251390 -68378760 - L2 LINE L2 -1015 2299 1381 2166 119 3 0 chr5 131251461 131251756 -68378394 - AluSq SINE Alu -17 296 1 285 257 9 19 chr5 131252003 131252108 -68378042 + (TAG)n Simple_repeat Simple_repeat 3 106 0 29 28 0 0 chr5 131252879 131252915 -68377235 + AT_rich Low_complexity Low_complexity 1 36 0 255 61 0 0 chr5 131253085 131253118 -68377032 + (TAGA)n Simple_repeat Simple_repeat 2 34 0 383 279 37 42 chr5 131253122 131253312 -68376838 - L1ME1 LINE L1 -23 6143 5955 208 231 51 51 chr5 131255080 131255158 -68374992 - MER5A DNA MER1_type -7 182 105 245 285 173 19 chr5 131256267 131256422 -68373728 + MIR SINE MIR 16 194 -62 1307 225 144 26 chr5 131256576 131256993 -68373157 - MER31B LTR ERV1 0 466 1 2218 56 0 0 chr5 131257593 131257861 -68372289 + AluY SINE Alu 1 268 -43 24 32 0 0 chr5 131258406 131258437 -68371713 + AT_rich Low_complexity Low_complexity 1 31 0 37 62 0 0 chr5 131258482 131258547 -68371603 + AT_rich Low_complexity Low_complexity 1 65 0 185 366 0 12 chr5 131259432 131259514 -68370636 - MIR SINE MIR 0 262 182 2311 97 7 3 chr5 131260398 131260707 -68369443 - AluSg SINE Alu 0 310 1 204 287 102 37 chr5 131261030 131261138 -68369012 - MIR SINE MIR 0 262 148 208 336 89 20 chr5 131263015 131263161 -68366989 + L2 LINE L2 2514 2669 -645 409 184 20 0 chr5 131264784 131264882 -68365268 - L1PA15 LINE L1 0 6165 6066 1858 86 20 24 chr5 131264882 131265168 -68364982 - L1PA8 LINE L1 -7 6165 5875 252 200 91 0 chr5 131266035 131266090 -68364060 + L2 LINE L2 3210 3269 -3 653 247 44 43 chr5 131267300 131267550 -68362600 - L1ME3A LINE L1 -43 6127 5877 23 0 0 0 chr5 131268898 131268921 -68361229 + AT_rich Low_complexity Low_complexity 1 23 0 424 261 6 11 chr5 131269517 131269693 -68360457 + L1M4 LINE L1 2132 2306 -3840 258 314 122 27 chr5 131269719 131269907 -68360243 + MLT1J2 LTR MaLR 10 215 -235 309 164 27 27 chr5 131269980 131270090 -68360060 + (TA)n Simple_repeat Simple_repeat 2 111 0 216 0 0 0 chr5 131270105 131270129 -68360021 + (T)n Simple_repeat Simple_repeat 1 24 0 2052 118 3 0 chr5 131270428 131270734 -68359416 + L1PB1 LINE L1 5844 6150 -1 24 85 0 0 chr5 131270794 131270853 -68359297 + AT_rich Low_complexity Low_complexity 1 59 0 579 283 91 65 chr5 131270988 131272289 -68357861 + L1M4 LINE L1 2897 4231 -1915 351 333 53 35 chr5 131272795 131272966 -68357184 + L2 LINE L2 2685 2858 -456 331 217 19 0 chr5 131273284 131273390 -68356760 + CT-rich Low_complexity Low_complexity 1 108 0 1871 96 0 4 chr5 131273391 131273641 -68356509 - AluSg SINE Alu -33 277 29 1973 135 14 0 chr5 131273642 131273938 -68356212 - AluSx SINE Alu -12 300 1 6658 72 2 0 chr5 131274392 131275256 -68354894 - L1PA8 LINE L1 -4 6168 5303 1993 145 7 0 chr5 131275634 131275930 -68354220 + AluSx SINE Alu 1 298 -14 181 409 36 22 chr5 131276587 131276724 -68353426 - MIR3 SINE MIR -62 146 8 216 0 0 0 chr5 131277533 131277557 -68352593 + (CATTT)n Simple_repeat Simple_repeat 2 25 0 1159 210 9 4 chr5 131280886 131281119 -68349031 - L1PA16 LINE L1 -25 6141 5908 490 56 127 0 chr5 131282092 131282163 -68347987 - MADE1 DNA Mariner 0 80 1 385 267 133 0 chr5 131282473 131282638 -68347512 + MIR SINE MIR 76 262 0 1406 272 179 8 chr5 131282748 131283240 -68346910 + MLT2E LTR ERVL 40 615 -13 3579 131 14 5 chr5 131283720 131284294 -68345856 - L1MA5A LINE L1 -29 6268 5690 3145 176 28 23 chr5 131284290 131284973 -68345177 - L1MA5A LINE L1 -1474 4672 3987 * 1673 333 57 35 chr5 131285006 131285735 -68344415 + ERVL LTR ERVL 851 1610 -4154 1591 182 44 36 chr5 131285735 131286097 -68344053 + MLT1A1 LTR MaLR 1 365 0 1673 333 57 35 chr5 131286097 131286376 -68343774 + ERVL LTR ERVL 1610 1881 -3883 2865 293 66 13 chr5 131286381 131288177 -68341973 + ERVL LTR ERVL 2891 4802 -962 1679 240 45 7 chr5 131288366 131288808 -68341342 - LTR40b LTR ERVL 0 462 4 24 32 0 0 chr5 131289798 131289829 -68340321 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr5 131292561 131292592 -68337558 + AT_rich Low_complexity Low_complexity 1 31 0 6082 179 34 4 chr5 131292827 131293153 -68336997 - L1PB4 LINE L1 0 6166 5851 465 19 0 0 chr5 131293153 131293207 -68336943 + (CA)n Simple_repeat Simple_repeat 2 55 0 6082 179 34 4 chr5 131293207 131294956 -68335194 - L1PB4 LINE L1 -315 5851 3995 2048 128 4 0 chr5 131295886 131296167 -68333983 + AluSx SINE Alu 1 282 -30 433 0 0 0 chr5 131296167 131296215 -68333935 + (CAAAA)n Simple_repeat Simple_repeat 3 180 0 288 304 83 48 chr5 131296324 131296492 -68333658 - MER5A DNA MER1_type -15 174 1 21 0 0 0 chr5 131297613 131297634 -68332516 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 131297664 131297685 -68332465 + AT_rich Low_complexity Low_complexity 1 21 0 624 134 50 25 chr5 131298558 131298677 -68331473 - MER41B LTR ERV1 0 635 514 318 27 0 0 chr5 131298677 131298714 -68331436 - L1P LINE L1 -1053 5093 5057 530 42 14 0 chr5 131298714 131298782 -68331368 + L1PA4 LINE L1 6083 6155 0 3519 111 4 9 chr5 131298784 131299308 -68330842 - MER41B LTR ERV1 -114 521 1 468 343 69 33 chr5 131299354 131299599 -68330551 - MIR SINE MIR -6 256 3 442 264 72 8 chr5 131299810 131299935 -68330215 + MER94 DNA DNA 1 133 -1 661 264 64 36 chr5 131300108 131300388 -68329762 - L2 LINE L2 0 3313 3026 214 261 0 0 chr5 131300587 131300633 -68329517 + CT-rich Low_complexity Low_complexity 2 47 0 663 126 0 18 chr5 131301271 131301382 -68328768 + MER4B LTR ERV1 1 109 -501 4045 163 11 19 chr5 131301388 131301978 -68328172 + MER50 LTR ERV1 1 585 -149 2274 198 41 70 chr5 131301978 131302606 -68327544 + LTR9 LTR ERV1 3 612 0 4045 163 11 19 chr5 131302606 131302732 -68327418 + MER50 LTR ERV1 585 711 -23 3536 161 57 13 chr5 131302736 131303460 -68326690 + MER4D LTR ERV1 120 903 0 6434 87 12 2 chr5 131304433 131305555 -68324595 + L1PA10 LINE L1 5038 6168 0 2007 117 34 0 chr5 131306683 131306974 -68323176 + AluSx SINE Alu 1 301 -11 204 125 0 0 chr5 131306974 131307006 -68323144 + (TA)n Simple_repeat Simple_repeat 1 32 0 1993 135 10 0 chr5 131307087 131307384 -68322766 - AluSx SINE Alu -12 300 1 235 75 0 25 chr5 131309785 131309825 -68320325 + L1MA1 LINE L1 6260 6298 -4 30 77 0 0 chr5 131309825 131309890 -68320260 + AT_rich Low_complexity Low_complexity 1 65 0 1771 168 7 3 chr5 131310646 131310955 -68319195 + AluJb SINE Alu 1 310 -2 893 311 83 33 chr5 131311106 131311624 -68318526 + L2 LINE L2 2035 2578 -736 208 300 43 0 chr5 131311633 131311703 -68318447 - MIR SINE MIR -4 258 186 355 329 78 23 chr5 131312077 131312296 -68317854 - L1MC4a LINE L1 -1898 5910 5680 2839 6 0 0 chr5 131312693 131313005 -68317145 - AluYb8 SINE Alu -6 312 1 1783 178 3 0 chr5 131313359 131313657 -68316493 - AluSx SINE Alu -13 299 1 400 243 9 9 chr5 131315261 131315372 -68314778 - MER103 DNA DNA -34 132 22 2135 104 3 10 chr5 131315443 131315740 -68314410 - AluSg SINE Alu -13 297 3 1252 89 16 11 chr5 131316497 131316687 -68313463 - L1P4 LINE L1 -631 5537 5347 3468 83 16 0 chr5 131316687 131317169 -68312981 + L1PA10 LINE L1 5677 6168 0 21 0 0 0 chr5 131317765 131317786 -68312364 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 131318526 131318548 -68311602 + (T)n Simple_repeat Simple_repeat 1 22 0 914 244 48 9 chr5 131319874 131320104 -68310046 + MER8 DNA MER2_type 1 239 0 2118 114 23 0 chr5 131320552 131320851 -68309299 - AluSp SINE Alu -7 306 1 354 66 33 0 chr5 131321112 131321173 -68308977 + L1PB2 LINE L1 6086 6148 -3 212 308 0 13 chr5 131322491 131322569 -68307581 - MIR SINE MIR 0 262 186 1780 191 3 0 chr5 131323394 131323688 -68306462 - AluSx SINE Alu -17 295 1 336 83 0 0 chr5 131324145 131324193 -68305957 + (TA)n Simple_repeat Simple_repeat 2 49 0 375 328 62 8 chr5 131324974 131325102 -68305048 + MIR SINE MIR 12 146 -116 2369 99 19 19 chr5 131325805 131326169 -68303981 - THE1B LTR MaLR 0 364 1 398 246 41 41 chr5 131326459 131326581 -68303569 - MIR SINE MIR -73 189 68 1976 144 3 7 chr5 131327696 131328001 -68302149 - AluSx SINE Alu -8 304 1 4129 172 45 27 chr5 131329755 131330645 -68299505 + MER4D LTR ERV1 1 664 0 1529 135 22 0 chr5 131330718 131330948 -68299202 - AluSp SINE Alu -21 292 58 45 19 0 0 chr5 131332503 131332555 -68297595 + AT_rich Low_complexity Low_complexity 1 52 0 919 200 71 0 chr5 131332555 131332780 -68297370 - L1MA4 LINE L1 -7 6293 6053 382 61 0 0 chr5 131332780 131332829 -68297321 - L1PA16 LINE L1 -11 6155 6107 487 289 89 0 chr5 131334402 131334537 -68295613 - MER91A DNA MER1_type -35 161 15 22 0 0 0 chr5 131335866 131335888 -68294262 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 131336221 131336243 -68293907 + AT_rich Low_complexity Low_complexity 1 22 0 27 73 0 0 chr5 131336293 131336348 -68293802 + AT_rich Low_complexity Low_complexity 1 55 0 21 36 0 0 chr5 131336591 131336619 -68293531 + AT_rich Low_complexity Low_complexity 1 28 0 35 54 0 0 chr5 131337266 131337322 -68292828 + AT_rich Low_complexity Low_complexity 1 56 0 2149 121 6 6 chr5 131337416 131337729 -68292421 + AluSq SINE Alu 1 313 0 424 352 34 0 chr5 131339391 131339570 -68290580 + MIR3 SINE MIR 3 187 -21 374 260 72 61 chr5 131340500 131340681 -68289469 + L2 LINE L2 366 548 -2766 2230 278 125 71 chr5 131340717 131342089 -68288061 + L2 LINE L2 891 2336 -978 2356 90 0 0 chr5 131342123 131342434 -68287716 - AluY SINE Alu 0 311 1 583 254 144 45 chr5 131342460 131342597 -68287553 - MER46C DNA MER2_type -18 320 198 552 30 0 0 chr5 131342597 131342663 -68287487 + (TAATG)n Simple_repeat Simple_repeat 3 68 0 583 254 144 45 chr5 131342663 131342816 -68287334 - MER46C DNA MER2_type -140 198 1 250 248 40 30 chr5 131343594 131343695 -68286455 - MER113 DNA MER1_type? -298 223 122 220 216 20 0 chr5 131343821 131343872 -68286278 + L2 LINE L2 3172 3223 -49 418 336 62 14 chr5 131345527 131345735 -68284415 + MIR SINE MIR 45 262 0 438 281 163 7 chr5 131345836 131345989 -68284161 + MER5A DNA MER1_type 10 186 -3 2246 100 0 16 chr5 131346372 131346683 -68283467 - AluSg SINE Alu -4 306 1 21 36 0 0 chr5 131348127 131348155 -68281995 + AT_rich Low_complexity Low_complexity 1 28 0 432 309 60 12 chr5 131348307 131348559 -68281591 - L1ME LINE L1 -347 5774 5511 311 355 0 29 chr5 131348606 131348744 -68281406 - L2 LINE L2 -8 3305 3172 354 359 158 20 chr5 131348849 131349048 -68281102 - L2 LINE L2 -338 2976 2806 1700 165 4 0 chr5 131349048 131349320 -68280830 + AluSx SINE Alu 1 273 -39 354 359 158 20 chr5 131349320 131349666 -68280484 - L2 LINE L2 -508 2806 2356 2051 114 3 7 chr5 131349669 131349966 -68280184 - AluSx SINE Alu -16 296 1 531 308 36 45 chr5 131350461 131350769 -68279381 + L1MEc LINE L1 51 355 -6041 2242 254 94 60 chr5 131350798 131351099 -68279051 + L1MEc LINE L1 625 914 -5301 1887 136 23 23 chr5 131351099 131351407 -68278743 - AluSx SINE Alu -4 308 1 2242 254 94 60 chr5 131351407 131352915 -68277235 + L1MEc LINE L1 914 2508 -3707 2246 105 0 0 chr5 131352915 131353209 -68276941 - AluSq SINE Alu -19 294 1 2242 254 94 60 chr5 131353209 131354285 -68275865 + L1MEc LINE L1 2508 3546 -2669 186 103 0 0 chr5 131354315 131354344 -68275806 + (TG)n Simple_repeat Simple_repeat 2 30 0 573 312 80 53 chr5 131354389 131354810 -68275340 - L1MEd LINE L1 -5573 546 109 1616 194 18 37 chr5 131354810 131355191 -68274959 + MLT1A2 LTR MaLR 1 374 0 573 312 80 53 chr5 131355191 131355256 -68274894 - L1MEd LINE L1 -6010 109 47 255 287 56 28 chr5 131355812 131355920 -68274230 + L2 LINE L2 2434 2544 -770 607 299 34 5 chr5 131356565 131356769 -68273381 + MIR SINE MIR 2 211 -51 214 301 78 10 chr5 131357039 131357142 -68273008 - L2 LINE L2 -780 2534 2425 1786 235 108 23 chr5 131357202 131357905 -68272245 + L1 LINE L1 2764 3526 -2620 1378 220 63 28 chr5 131357913 131358050 -68272100 - L1 LINE L1 -1163 4983 4852 210 71 0 0 chr5 131358050 131358078 -68272072 + (TA)n Simple_repeat Simple_repeat 2 29 0 1378 220 63 28 chr5 131358078 131358304 -68271846 - L1 LINE L1 -1294 4852 4607 496 99 0 89 chr5 131358305 131358406 -68271744 + L1MB4 LINE L1 6089 6180 0 245 162 0 0 chr5 131358424 131358461 -68271689 + MLT1D LTR MaLR 27 63 -442 1929 173 31 25 chr5 131358466 131358824 -68271326 + MLT1A1 LTR MaLR 1 360 -5 1492 211 93 15 chr5 131358829 131359236 -68270914 + MLT1D LTR MaLR 67 505 0 2421 149 16 14 chr5 131359335 131359758 -68270392 - MSTA LTR MaLR -4 424 1 588 290 224 9 chr5 131359817 131360152 -68269998 - L2 LINE L2 -1107 2207 1801 327 185 8 17 chr5 131361160 131361279 -68268871 + (TA)n Simple_repeat Simple_repeat 1 118 0 2265 112 0 0 chr5 131363960 131364265 -68265885 + AluY SINE Alu 1 305 -6 307 360 63 40 chr5 131364973 131365195 -68264955 - MIR SINE MIR 0 262 36 292 351 77 83 chr5 131365829 131366299 -68263851 - L2 LINE L2 -2 3270 2804 1524 180 25 28 chr5 131367270 131367554 -68262596 + AluJb SINE Alu 5 287 -25 1630 177 0 3 chr5 131368764 131369151 -68260999 - AluJb SINE Alu 0 386 1 23 68 0 0 chr5 131370424 131370468 -68259682 + AT_rich Low_complexity Low_complexity 1 44 0 810 341 27 7 chr5 131371766 131372062 -68258088 + LTR16A LTR ERVL 110 411 -39 286 288 131 19 chr5 131372472 131372632 -68257518 - MIR3 SINE MIR -1 207 30 180 381 59 17 chr5 131375127 131375245 -68254905 - MIR3 SINE MIR -39 169 47 21 0 0 0 chr5 131375281 131375302 -68254848 + AT_rich Low_complexity Low_complexity 1 21 0 190 328 0 33 chr5 131375316 131375377 -68254773 - L2 LINE L2 0 3313 3255 200 328 67 106 chr5 131375435 131375719 -68254431 - L2 LINE L2 -182 3090 2818 756 347 161 17 chr5 131375756 131376595 -68253555 - L2 LINE L2 -871 2443 1484 187 400 27 13 chr5 131376749 131376899 -68253251 - L2 LINE L2 -2200 1114 963 1626 170 45 21 chr5 131376969 131377257 -68252893 - AluJb SINE Alu -16 296 2 1681 210 26 24 chr5 131377294 131377797 -68252353 - L1MD2 LINE L1 -10 6349 5794 960 220 26 15 chr5 131377799 131378032 -68252118 - L1MD2 LINE L1 -582 5573 5402 23 0 0 0 chr5 131379102 131379125 -68251025 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr5 131379919 131379939 -68250211 + (T)n Simple_repeat Simple_repeat 1 20 0 24 0 0 0 chr5 131380112 131380136 -68250014 + AT_rich Low_complexity Low_complexity 1 24 0 347 290 8 38 chr5 131380414 131380545 -68249605 + MIR SINE MIR 87 213 -49 2773 3 0 0 chr5 131380966 131381268 -68248882 + AluYa5 SINE Alu 1 302 -9 26 30 0 0 chr5 131382512 131382545 -68247605 + AT_rich Low_complexity Low_complexity 1 33 0 1171 164 0 0 chr5 131383762 131383945 -68246205 - AluSg/x SINE Alu 0 310 128 210 91 0 0 chr5 131383966 131383999 -68246151 + (TG)n Simple_repeat Simple_repeat 2 34 0 204 163 0 0 chr5 131384232 131384275 -68245875 + (TG)n Simple_repeat Simple_repeat 2 44 0 1235 129 0 0 chr5 131386157 131386328 -68243822 + AluSg/x SINE Alu 129 299 -13 418 143 26 0 chr5 131386870 131386947 -68243203 + L1MA4 LINE L1 6101 6179 -121 357 24 0 0 chr5 131388550 131388592 -68241558 + (TG)n Simple_repeat Simple_repeat 1 42 0 447 273 97 17 chr5 131388688 131388926 -68241224 + L1M4 LINE L1 3256 3512 -2634 1971 132 0 30 chr5 131389020 131389281 -68240869 - L1PA14 LINE L1 -1 6160 5910 2068 126 0 10 chr5 131389281 131389590 -68240560 - AluSq SINE Alu -6 307 2 1971 132 0 30 chr5 131389590 131389661 -68240489 - L1PA14 LINE L1 -251 5910 5838 343 289 102 22 chr5 131389785 131390010 -68240140 + L1M4 LINE L1 3789 4031 -2115 237 314 47 25 chr5 131390090 131390316 -68239834 + L1M2 LINE L1 1861 2277 -4264 604 211 8 0 chr5 131390805 131390928 -68239222 + L1ME LINE L1 6 129 -5941 1938 168 0 0 chr5 131390957 131391261 -68238889 + AluSx SINE Alu 1 304 -8 5660 133 48 19 chr5 131391261 131392975 -68237175 - L1PA13 LINE L1 -16 6147 4384 624 273 24 38 chr5 131393299 131393508 -68236642 + L1ME LINE L1 393 598 -5472 892 201 6 0 chr5 131393508 131393672 -68236478 - MER58B DNA MER1_type 0 341 177 1458 290 68 19 chr5 131393757 131394710 -68235440 + L1ME LINE L1 660 1564 -4516 529 208 42 0 chr5 131394994 131395114 -68235036 + MER58B DNA MER1_type 202 326 -15 21 0 0 0 chr5 131395258 131395279 -68234871 + AT_rich Low_complexity Low_complexity 1 21 0 972 269 110 50 chr5 131395281 131395925 -68234225 + L1ME LINE L1 2049 2731 -3349 * 1773 241 83 32 chr5 131395922 131396822 -68233328 - L1ME LINE L1 -519 5643 4707 317 71 0 0 chr5 131396921 131396963 -68233187 + MADE1 DNA Mariner 1 42 -38 267 175 258 62 chr5 131397967 131398064 -68232086 - L2 LINE L2 0 3313 3198 1926 168 42 0 chr5 131398166 131398499 -68231651 - MER7A DNA MER2_type 0 346 2 5787 124 13 11 chr5 131398682 131399787 -68230363 - L1PA14 LINE L1 0 6161 5001 559 310 221 3 chr5 131399787 131400113 -68230037 + L2 LINE L2 1965 2361 -953 * 1043 284 74 27 chr5 131400112 131400478 -68229672 + L2 LINE L2 2929 3311 -2 260 331 73 45 chr5 131400936 131401114 -68229036 + MIR SINE MIR 6 188 -74 402 20 0 0 chr5 131401114 131401164 -68228986 - L1PA6 LINE L1 -1114 5032 4983 6923 60 1 9 chr5 131401164 131402318 -68227832 + L1PA6 LINE L1 5008 6154 0 201 175 35 70 chr5 131402813 131402870 -68227280 - L2 LINE L2 -459 2855 2801 2408 67 0 22 chr5 131403000 131403313 -68226837 - AluY SINE Alu -3 308 3 336 224 201 52 chr5 131403384 131403518 -68226632 - L2 LINE L2 -2 3311 3158 950 174 23 64 chr5 131404286 131404505 -68225645 - MER2 DNA MER2_type -135 210 1 302 282 103 8 chr5 131405171 131405288 -68224862 - MIR SINE MIR -44 218 91 287 380 9 9 chr5 131406215 131406323 -68223827 - MIR3 SINE MIR -96 112 5 24 0 0 0 chr5 131406545 131406569 -68223581 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 131406732 131406756 -68223394 + AT_rich Low_complexity Low_complexity 1 24 0 342 296 169 14 chr5 131407789 131407931 -68222219 - MIR SINE MIR -86 176 13 254 247 171 51 chr5 131409027 131409185 -68220965 + MIR SINE MIR 57 233 -29 380 248 43 35 chr5 131410018 131410159 -68219991 - MIR SINE MIR -3 259 118 359 323 20 66 chr5 131411579 131411777 -68218373 + MER5A DNA MER1_type 1 189 0 22760 42 3 0 chr5 131411904 131414760 -68215390 - L1P LINE L1 -1443 4703 1840 3244 43 2 2 chr5 131414757 131415191 -68214959 + L1PA4 LINE L1 5734 6167 0 * 1603 55 0 0 chr5 131415202 131415404 -68214746 - L1P LINE L1 -4302 1844 1643 7344 44 2 0 chr5 131415404 131416859 -68213291 + L1PA5 LINE L1 4695 6150 -4 31 0 0 0 chr5 131417025 131417056 -68213094 + AT_rich Low_complexity Low_complexity 1 31 0 285 318 92 28 chr5 131417743 131417969 -68212181 - MIR SINE MIR -15 247 7 776 163 0 0 chr5 131418273 131418402 -68211748 - AluSx SINE Alu -1 309 181 546 170 0 0 chr5 131418408 131418502 -68211648 - AluSx SINE Alu -212 101 8 1670 159 20 20 chr5 131418707 131419008 -68211142 - L1MA9 LINE L1 -218 6094 5794 378 0 0 0 chr5 131419008 131419050 -68211100 + (TA)n Simple_repeat Simple_repeat 1 42 0 297 0 0 0 chr5 131419049 131419082 -68211068 + (CA)n Simple_repeat Simple_repeat 2 34 0 * 215 219 41 0 chr5 131419115 131419188 -68210962 + (TA)n Simple_repeat Simple_repeat 1 76 0 238 279 51 0 chr5 131419190 131419269 -68210881 - L1MC4 LINE L1 -1335 6707 6625 * 270 160 40 0 chr5 131419261 131419311 -68210839 - L1MA9 LINE L1 -527 5773 5722 2079 109 3 0 chr5 131419952 131420262 -68209888 + AluSx SINE Alu 1 311 0 1558 320 104 14 chr5 131421475 131422291 -68207859 - L2 LINE L2 -60 3253 2372 384 287 41 0 chr5 131423318 131423440 -68206710 - MIR SINE MIR -4 258 132 400 312 139 34 chr5 131423460 131423697 -68206453 - MIR SINE MIR 0 262 1 2357 92 10 0 chr5 131423824 131424128 -68206022 + AluSc SINE Alu 3 309 0 577 254 110 59 chr5 131424288 131424560 -68205590 + MER102b DNA MER1_type 44 329 -12 314 273 10 0 chr5 131424665 131424764 -68205386 - L1ME3A LINE L1 -38 6132 6033 758 106 49 0 chr5 131424809 131424932 -68205218 - L1MA8 LINE L1 -53 6238 6110 1154 242 0 4 chr5 131424972 131425212 -68204938 + MER8 DNA MER2_type 1 239 0 22 56 0 0 chr5 131425274 131425310 -68204840 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr5 131425512 131425537 -68204613 + AT_rich Low_complexity Low_complexity 1 25 0 202 211 0 0 chr5 131426401 131426439 -68203711 + (CA)n Simple_repeat Simple_repeat 1 38 0 2040 84 0 14 chr5 131427058 131427362 -68202788 - AluSg SINE Alu 0 300 1 2586 204 54 24 chr5 131427693 131428271 -68201879 - MER77 LTR ERV1 -8 597 3 2128 78 34 7 chr5 131428282 131428575 -68201575 - AluSp SINE Alu -12 301 1 306 283 53 26 chr5 131428667 131428780 -68201370 - MIR SINE MIR -37 225 110 279 0 0 0 chr5 131429017 131429048 -68201102 + (TG)n Simple_repeat Simple_repeat 2 32 0 208 333 0 37 chr5 131429304 131429385 -68200765 - MER5C DNA MER1_type -246 78 1 293 289 39 31 chr5 131429973 131430076 -68200074 - MIR SINE MIR -95 113 8 346 374 78 64 chr5 131430141 131430241 -68199909 + L2 LINE L2 2808 2905 -367 1315 70 75 5 chr5 131430241 131430441 -68199709 + L1PA10 LINE L1 5939 6152 -16 346 374 78 64 chr5 131430441 131430763 -68199387 + L2 LINE L2 2905 3236 -36 1558 320 104 14 chr5 131431063 131431879 -68198271 + L2 LINE L2 2372 3253 -60 2078 109 3 0 chr5 131433092 131433402 -68196748 - AluSx SINE Alu 0 311 1 270 160 40 0 chr5 131434043 131434093 -68196057 + L1MA9 LINE L1 5722 5773 -527 238 279 51 0 chr5 131434085 131434164 -68195986 + L1MC4 LINE L1 6625 6707 -1335 * 215 219 41 0 chr5 131434166 131434239 -68195911 + (TA)n Simple_repeat Simple_repeat 1 76 0 315 0 0 0 chr5 131434272 131434307 -68195843 + (TG)n Simple_repeat Simple_repeat 2 36 0 * 378 0 0 0 chr5 131434306 131434348 -68195802 + (TA)n Simple_repeat Simple_repeat 1 42 0 1670 159 20 20 chr5 131434348 131434649 -68195501 + L1MA9 LINE L1 5794 6094 -218 776 166 0 3 chr5 131434854 131435083 -68195067 + AluSx SINE Alu 8 311 -1 285 318 92 28 chr5 131435387 131435613 -68194537 + MIR SINE MIR 7 247 -15 31 0 0 0 chr5 131436300 131436331 -68193819 + AT_rich Low_complexity Low_complexity 1 31 0 7344 44 3 1 chr5 131436497 131437952 -68192198 - L1PA5 LINE L1 -4 6150 4695 1603 55 0 0 chr5 131437952 131438154 -68191996 + L1P LINE L1 1643 1844 -4302 188 83 0 28 chr5 131438165 131438201 -68191949 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 3243 43 2 2 chr5 131438201 131438599 -68191551 - L1PA4 LINE L1 -24 6131 5734 * 22760 42 3 0 chr5 131438596 131441452 -68188698 + L1P LINE L1 1840 4703 -1443 359 323 20 66 chr5 131441579 131441777 -68188373 - MER5A DNA MER1_type 0 189 1 380 248 43 35 chr5 131443197 131443338 -68186812 + MIR SINE MIR 118 259 -3 254 247 171 51 chr5 131444171 131444329 -68185821 - MIR SINE MIR -29 233 57 330 303 169 14 chr5 131445425 131445567 -68184583 + MIR SINE MIR 13 176 -86 24 0 0 0 chr5 131446600 131446624 -68183526 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 131446787 131446811 -68183339 + AT_rich Low_complexity Low_complexity 1 24 0 287 380 9 9 chr5 131447033 131447141 -68183009 + MIR3 SINE MIR 5 112 -96 302 282 103 8 chr5 131448068 131448185 -68181965 + MIR SINE MIR 91 218 -44 950 174 23 64 chr5 131448851 131449070 -68181080 + MER2 DNA MER2_type 1 210 -135 336 224 201 52 chr5 131449838 131449972 -68180178 + L2 LINE L2 3158 3311 -2 2319 65 16 23 chr5 131450043 131450352 -68179798 + AluY SINE Alu 3 309 -2 201 175 35 70 chr5 131450482 131450539 -68179611 + L2 LINE L2 2801 2855 -459 6934 60 0 0 chr5 131451034 131452188 -68177962 - L1PA6 LINE L1 0 6154 5008 402 20 0 0 chr5 131452188 131452238 -68177912 + L1PA6 LINE L1 4983 5032 -1114 260 331 73 45 chr5 131452238 131452416 -68177734 - MIR SINE MIR -74 188 6 1043 284 74 27 chr5 131452874 131453240 -68176910 - L2 LINE L2 -2 3311 2929 573 307 221 3 chr5 131453239 131453565 -68176585 - L2 LINE L2 -953 2361 1965 * 5787 123 13 11 chr5 131453565 131454670 -68175480 + L1PA14 LINE L1 5001 6161 0 1926 168 42 0 chr5 131454853 131455186 -68174964 + MER7A DNA MER2_type 2 346 0 267 175 258 62 chr5 131455288 131455385 -68174765 + L2 LINE L2 3198 3313 0 317 71 0 0 chr5 131456389 131456431 -68173719 - MADE1 DNA Mariner -38 42 1 1773 241 83 31 chr5 131456530 131457428 -68172722 + L1ME LINE L1 4707 5643 -519 909 271 112 50 chr5 131457425 131458068 -68172082 - L1ME LINE L1 -3349 2731 2049 * 21 0 0 0 chr5 131458070 131458091 -68172059 + AT_rich Low_complexity Low_complexity 1 21 0 529 208 42 0 chr5 131458235 131458355 -68171795 - MER58B DNA MER1_type -15 326 202 1519 295 68 10 chr5 131458639 131459587 -68170563 - L1ME LINE L1 -4516 1564 660 892 201 6 0 chr5 131459672 131459836 -68170314 + MER58B DNA MER1_type 177 341 0 624 273 24 38 chr5 131459836 131460045 -68170105 - L1ME LINE L1 -5472 598 393 5596 97 46 7 chr5 131460369 131461082 -68169068 + L1PA13 LINE L1 4384 5068 -1095 189 0 0 0 chr5 131461082 131461103 -68169047 + (GA)n Simple_repeat Simple_repeat 2 22 0 5596 97 46 7 chr5 131461103 131462085 -68168065 + L1PA13 LINE L1 5068 6147 -16 1938 168 0 0 chr5 131462085 131462389 -68167761 - AluSx SINE Alu -8 304 1 604 211 8 0 chr5 131462418 131462541 -68167609 - L1ME LINE L1 -5941 129 6 237 318 22 27 chr5 131463065 131463256 -68166894 - L1M2 LINE L1 -4264 2277 1861 302 298 102 22 chr5 131463336 131463561 -68166589 - L1M4 LINE L1 -2115 4031 3789 1971 132 0 30 chr5 131463685 131463756 -68166394 + L1PA14 LINE L1 5838 5910 -251 2068 126 0 10 chr5 131463756 131464065 -68166085 + AluSq SINE Alu 2 307 -6 1971 132 0 30 chr5 131464065 131464326 -68165824 + L1PA14 LINE L1 5910 6160 -1 439 286 103 17 chr5 131464418 131464743 -68165407 - L1M4 LINE L1 -2632 3514 3157 324 0 0 0 chr5 131464754 131464790 -68165360 + (CA)n Simple_repeat Simple_repeat 1 36 0 418 143 26 0 chr5 131466393 131466470 -68163680 - L1MA4 LINE L1 -121 6179 6101 1235 129 0 0 chr5 131467012 131467183 -68162967 - AluSg/x SINE Alu -13 299 129 204 163 0 0 chr5 131469066 131469109 -68161041 + (CA)n Simple_repeat Simple_repeat 2 44 0 210 91 0 0 chr5 131469342 131469375 -68160775 + (CA)n Simple_repeat Simple_repeat 2 34 0 1162 164 0 0 chr5 131469396 131469579 -68160571 + AluSg/x SINE Alu 128 310 0 21 36 0 0 chr5 131470185 131470213 -68159937 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 131470799 131470831 -68159319 + AT_rich Low_complexity Low_complexity 1 32 0 2867 0 0 0 chr5 131472086 131472397 -68157753 - AluYa5 SINE Alu 0 311 1 347 290 8 38 chr5 131472818 131472949 -68157201 - MIR SINE MIR -49 213 87 24 0 0 0 chr5 131473227 131473251 -68156899 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr5 131474236 131474259 -68155891 + AT_rich Low_complexity Low_complexity 1 23 0 960 220 26 15 chr5 131475329 131475562 -68154588 + L1MD2 LINE L1 5402 5642 -582 1661 210 26 24 chr5 131475564 131476067 -68154083 + L1MD2 LINE L1 5794 6349 -10 1626 170 45 21 chr5 131476104 131476392 -68153758 + AluJb SINE Alu 2 296 -16 187 400 27 13 chr5 131476462 131476612 -68153538 + L2 LINE L2 963 1114 -2200 773 346 161 17 chr5 131476766 131477605 -68152545 + L2 LINE L2 1484 2443 -871 217 324 67 106 chr5 131477642 131477926 -68152224 + L2 LINE L2 2818 3090 -182 190 328 0 33 chr5 131477984 131478045 -68152105 + L2 LINE L2 3255 3313 0 21 0 0 0 chr5 131478059 131478080 -68152070 + AT_rich Low_complexity Low_complexity 1 21 0 286 288 131 19 chr5 131480726 131480886 -68149264 + MIR3 SINE MIR 30 207 -1 791 345 27 7 chr5 131481296 131481592 -68148558 - LTR16A LTR ERVL -39 411 110 23 68 0 0 chr5 131482890 131482934 -68147216 + AT_rich Low_complexity Low_complexity 1 44 0 1767 179 0 3 chr5 131484207 131484588 -68145562 + AluJb SINE Alu 1 380 0 1526 180 25 28 chr5 131485798 131486082 -68144068 - AluJb SINE Alu -25 287 5 278 349 79 85 chr5 131487053 131487523 -68142627 + L2 LINE L2 2804 3270 -2 307 360 63 40 chr5 131488157 131488379 -68141771 + MIR SINE MIR 36 262 0 2237 118 0 0 chr5 131489087 131489393 -68140757 - AluY SINE Alu -5 306 1 309 188 8 17 chr5 131492073 131492190 -68137960 + (TA)n Simple_repeat Simple_repeat 1 116 0 602 287 224 9 chr5 131493198 131493533 -68136617 + L2 LINE L2 1801 2207 -1107 2400 151 16 14 chr5 131493592 131494015 -68136135 + MSTA LTR MaLR 1 424 -4 1505 209 93 15 chr5 131494114 131494521 -68135629 - MLT1D LTR MaLR 0 505 67 1929 173 31 25 chr5 131494526 131494884 -68135266 - MLT1A1 LTR MaLR -5 360 1 245 162 0 0 chr5 131494889 131494926 -68135224 - MLT1D LTR MaLR -442 63 27 496 99 0 89 chr5 131494944 131495045 -68135105 - L1MB4 LINE L1 0 6180 6089 1391 217 63 28 chr5 131495046 131495272 -68134878 + L1 LINE L1 4607 4852 -1294 210 71 0 0 chr5 131495272 131495300 -68134850 + (TA)n Simple_repeat Simple_repeat 2 29 0 1391 217 63 28 chr5 131495300 131495437 -68134713 + L1 LINE L1 4852 4983 -1163 1786 235 108 23 chr5 131495445 131496148 -68134002 - L1 LINE L1 -2620 3526 2764 228 291 78 10 chr5 131496208 131496311 -68133839 + L2 LINE L2 2425 2534 -780 619 294 34 5 chr5 131496581 131496785 -68133365 - MIR SINE MIR -51 211 2 255 287 56 28 chr5 131497430 131497538 -68132612 - L2 LINE L2 -770 2544 2434 558 314 80 53 chr5 131498094 131498159 -68131991 + L1MEd LINE L1 47 109 -6010 1629 192 18 37 chr5 131498159 131498540 -68131610 - MLT1A2 LTR MaLR 0 374 1 558 314 80 53 chr5 131498540 131498961 -68131189 + L1MEd LINE L1 109 546 -5573 222 91 0 0 chr5 131499006 131499039 -68131111 + (CA)n Simple_repeat Simple_repeat 2 34 0 2286 254 94 64 chr5 131499069 131500145 -68130005 - L1MEc LINE L1 -2669 3546 2504 2263 105 0 0 chr5 131500145 131500441 -68129709 + AluSq SINE Alu 1 296 -17 2286 254 94 64 chr5 131500441 131501949 -68128201 - L1MEc LINE L1 -3711 2504 915 1895 136 23 23 chr5 131501949 131502257 -68127893 + AluSx SINE Alu 1 308 -4 2286 254 94 64 chr5 131502257 131502558 -68127592 - L1MEc LINE L1 -5300 915 625 531 308 36 45 chr5 131502587 131502895 -68127255 - L1MEc LINE L1 -6041 355 51 2042 115 3 7 chr5 131503390 131503686 -68126464 + AluSx SINE Alu 1 295 -17 333 363 158 20 chr5 131503689 131504035 -68126115 + L2 LINE L2 2356 2653 -661 1700 165 4 0 chr5 131504035 131504307 -68125843 - AluSx SINE Alu -39 273 1 333 363 158 20 chr5 131504307 131504506 -68125644 + L2 LINE L2 2653 2976 -338 311 355 0 29 chr5 131504611 131504749 -68125401 + L2 LINE L2 3172 3305 -8 432 309 60 12 chr5 131504796 131505048 -68125102 + L1ME LINE L1 5511 5774 -347 21 36 0 0 chr5 131505200 131505228 -68124922 + AT_rich Low_complexity Low_complexity 1 28 0 2213 101 0 16 chr5 131506672 131506979 -68123171 + AluSg SINE Alu 1 302 -8 438 281 163 7 chr5 131507362 131507515 -68122635 - MER5A DNA MER1_type -3 186 10 418 336 62 14 chr5 131507616 131507824 -68122326 - MIR SINE MIR 0 262 45 220 216 20 0 chr5 131509479 131509530 -68120620 - L2 LINE L2 -49 3223 3172 250 248 40 30 chr5 131509656 131509757 -68120393 + MER113 DNA MER1_type? 122 223 -298 583 254 144 45 chr5 131510535 131510688 -68119462 + MER46C DNA MER2_type 1 137 -201 417 39 0 0 chr5 131510688 131510739 -68119411 + (CATTA)n Simple_repeat Simple_repeat 3 53 0 583 254 144 45 chr5 131510739 131510876 -68119274 + MER46C DNA MER2_type 137 320 -18 2356 90 0 0 chr5 131510902 131511213 -68118937 + AluY SINE Alu 1 311 0 2231 279 125 71 chr5 131511247 131512619 -68117531 - L2 LINE L2 -978 2336 891 374 260 72 61 chr5 131512655 131512836 -68117314 - L2 LINE L2 -2766 548 366 424 352 34 0 chr5 131513766 131513945 -68116205 - MIR3 SINE MIR -21 187 3 2149 121 6 6 chr5 131515607 131515920 -68114230 - AluSq SINE Alu 0 313 1 35 54 0 0 chr5 131516014 131516070 -68114080 + AT_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr5 131516717 131516745 -68113405 + AT_rich Low_complexity Low_complexity 1 28 0 27 73 0 0 chr5 131516988 131517043 -68113107 + AT_rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr5 131517093 131517115 -68113035 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 131517448 131517470 -68112680 + AT_rich Low_complexity Low_complexity 1 22 0 487 289 89 0 chr5 131518799 131518934 -68111216 + MER91A DNA MER1_type 15 161 -35 382 61 0 0 chr5 131520507 131520556 -68109594 + L1PA16 LINE L1 6107 6155 -11 910 204 71 0 chr5 131520556 131520781 -68109369 + L1MA4 LINE L1 6053 6293 -7 45 19 0 0 chr5 131520781 131520833 -68109317 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 131522628 131522649 -68107501 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 131523389 131523413 -68106737 + (T)n Simple_repeat Simple_repeat 1 24 0 914 244 48 9 chr5 131524739 131524969 -68105181 + MER8 DNA MER2_type 1 239 0 2118 114 23 0 chr5 131525417 131525716 -68104434 - AluSp SINE Alu -7 306 1 354 66 33 0 chr5 131525977 131526038 -68104112 + L1PB2 LINE L1 6086 6148 -3 212 308 0 13 chr5 131527352 131527430 -68102720 - MIR SINE MIR 0 262 186 1780 191 3 0 chr5 131528255 131528549 -68101601 - AluSx SINE Alu -17 295 1 300 91 0 0 chr5 131529006 131529050 -68101100 + (TA)n Simple_repeat Simple_repeat 2 45 0 375 328 62 8 chr5 131529818 131529946 -68100204 + MIR SINE MIR 12 146 -116 2369 99 19 19 chr5 131530646 131531010 -68099140 - THE1B LTR MaLR 0 364 1 385 254 41 41 chr5 131531300 131531422 -68098728 - MIR SINE MIR -73 189 68 1974 138 7 7 chr5 131532537 131532841 -68097309 - AluSx SINE Alu -8 304 1 4129 172 45 27 chr5 131534595 131535485 -68094665 + MER4D LTR ERV1 1 664 0 1529 135 22 0 chr5 131535558 131535788 -68094362 - AluSp SINE Alu -21 292 58 45 19 0 0 chr5 131537343 131537395 -68092755 + AT_rich Low_complexity Low_complexity 1 52 0 910 204 71 0 chr5 131537395 131537620 -68092530 - L1MA4 LINE L1 -7 6293 6053 382 61 0 0 chr5 131537620 131537669 -68092481 - L1PA16 LINE L1 -11 6155 6107 9699 30 2 0 chr5 131587831 131589764 -68040386 + L1PA2 LINE L1 4221 6155 0 238 291 47 35 chr5 131589819 131589905 -68040245 + MIR SINE MIR 50 136 -126 181 260 180 0 chr5 131590351 131590401 -68039749 - MER5B DNA MER1_type -61 117 59 345 328 40 24 chr5 131591350 131591475 -68038675 - L2 LINE L2 -4 3268 3142 723 208 22 22 chr5 131591702 131591885 -68038265 + L1ME LINE L1 5398 5580 -586 966 195 22 16 chr5 131591925 131592110 -68038040 + AluJo SINE Alu 1 186 -126 223 336 0 56 chr5 131592257 131592364 -68037786 - MER5A DNA MER1_type -84 105 5 610 268 137 52 chr5 131592454 131592876 -68037274 - L2 LINE L2 0 3313 2856 869 171 46 0 chr5 131593059 131593234 -68036916 + MER20 DNA MER1_type 37 219 0 539 240 55 14 chr5 131593435 131593581 -68036569 + MIR SINE MIR 110 261 -1 214 341 0 12 chr5 131594499 131594581 -68035569 - MIR SINE MIR -79 183 103 6110 36 5 2 chr5 131594710 131595633 -68034517 - L1PA5 LINE L1 -139 6015 5091 192 343 47 47 chr5 131596876 131597048 -68033102 - L2 LINE L2 -202 3070 2899 3064 88 2 0 chr5 131597158 131597611 -68032539 - L1P LINE L1 -807 5339 4886 297 378 18 0 chr5 131598172 131598283 -68031867 - L2 LINE L2 -31 3241 3129 1055 298 80 14 chr5 131598339 131598778 -68031372 + LTR16C LTR ERVL 4 471 -20 1478 245 32 93 chr5 131598785 131599068 -68031082 + MLT1G LTR MaLR 10 240 -350 522 0 0 0 chr5 131599068 131599126 -68031024 + (TA)n Simple_repeat Simple_repeat 2 59 0 1478 245 32 93 chr5 131599126 131599430 -68030720 + MLT1G LTR MaLR 240 561 -29 24928 38 3 1 chr5 131600389 131603611 -68026539 - L1P LINE L1 -1552 4594 1367 2901 209 54 2 chr5 131603740 131604557 -68025593 + L1 LINE L1 2955 3813 -2333 679 269 114 56 chr5 131604642 131605106 -68025044 - LTR1B LTR ERV1 -302 524 34 2632 216 61 60 chr5 131605188 131606313 -68023837 - HUERS-P2 LTR ERV1 0 5217 2570 522 194 10 0 chr5 131606418 131606516 -68023634 - MLT1E3 LTR MaLR -525 99 1 444 261 124 20 chr5 131606525 131606678 -68023472 + MIR SINE MIR 12 180 -82 22 35 0 0 chr5 131606688 131606717 -68023433 + AT_rich Low_complexity Low_complexity 1 29 0 1832 144 45 9 chr5 131606773 131607107 -68023043 - MER7A DNA MER2_type -1 345 2 729 78 0 0 chr5 131608245 131608348 -68021802 - AluY SINE Alu -3 308 206 191 322 0 0 chr5 131608575 131608634 -68021516 - MIR SINE MIR -27 235 177 * 314 323 11 11 chr5 131608629 131608722 -68021428 + L2 LINE L2 3146 3238 -34 625 206 46 51 chr5 131608876 131609051 -68021099 + MIR SINE MIR 18 191 -71 256 331 102 18 chr5 131609251 131609417 -68020733 + MER5A DNA MER1_type 10 189 0 241 294 7 55 chr5 131609734 131609880 -68020270 + CT-rich Low_complexity Low_complexity 4 142 0 242 212 0 12 chr5 131609916 131610001 -68020149 + CT-rich Low_complexity Low_complexity 1 84 0 432 0 0 0 chr5 131610649 131610697 -68019453 + (CA)n Simple_repeat Simple_repeat 1 48 0 198 118 0 0 chr5 131611686 131611720 -68018430 + (TC)n Simple_repeat Simple_repeat 1 34 0 263 264 83 0 chr5 131612524 131612596 -68017554 + MIR3 SINE MIR 120 197 -11 24 85 0 0 chr5 131612610 131612669 -68017481 + AT_rich Low_complexity Low_complexity 1 59 0 283 216 102 23 chr5 131613398 131613486 -68016664 + MIR3 SINE MIR 60 154 -54 1064 245 180 21 chr5 131613770 131614203 -68015947 + MLT1H1 LTR MaLR 1 502 -53 503 303 26 0 chr5 131615263 131615415 -68014735 + L2 LINE L2 2825 2980 -333 2224 133 0 0 chr5 131615416 131615717 -68014433 - AluSx SINE Alu -11 301 1 883 206 221 0 chr5 131615757 131615956 -68014194 - MIR SINE MIR -12 250 8 308 340 0 0 chr5 131616128 131616234 -68013916 - MIR SINE MIR -19 243 138 291 328 57 51 chr5 131616353 131616530 -68013620 - MIR SINE MIR -57 205 28 444 67 0 0 chr5 131616708 131616768 -68013382 + (CA)n Simple_repeat Simple_repeat 2 61 0 190 116 47 0 chr5 131616782 131616825 -68013325 + (TA)n Simple_repeat Simple_repeat 1 45 0 736 256 54 5 chr5 131617588 131617811 -68012339 + MER102a DNA MER1_type 64 297 -33 2198 216 55 27 chr5 131618615 131618930 -68011220 - L1ME1 LINE L1 -241 5925 5620 1489 193 43 7 chr5 131618930 131619231 -68010919 + AluJo SINE Alu 1 312 0 2198 216 55 27 chr5 131619231 131620074 -68010076 - L1ME1 LINE L1 -546 5620 4739 213 385 10 0 chr5 131620088 131620184 -68009966 - MIR SINE MIR -91 117 21 1921 151 20 3 chr5 131621790 131622082 -68008068 + AluSx SINE Alu 1 297 -15 1866 153 13 22 chr5 131622092 131622406 -68007744 + AluJb SINE Alu 1 311 -1 234 303 53 0 chr5 131622418 131622494 -68007656 - MIR SINE MIR -74 188 109 3209 205 80 10 chr5 131622503 131623287 -68006863 + MER52C LTR ERV1 1 839 -439 528 244 30 30 chr5 131623523 131623724 -68006426 - L1ME1 LINE L1 -2158 3988 3788 305 259 75 53 chr5 131623786 131624068 -68006082 - L1ME1 LINE L1 -3115 3031 2744 386 267 44 11 chr5 131624120 131624300 -68005850 - L1ME1 LINE L1 -3645 2501 2316 1276 347 61 27 chr5 131625061 131625351 -68004799 - HERVL LTR ERVL -497 4988 4709 1521 209 19 43 chr5 131625351 131625725 -68004425 + MLT1A1 LTR MaLR 1 365 0 1276 347 61 27 chr5 131625725 131626380 -68003770 - HERVL LTR ERVL -776 4709 4078 1875 154 0 3 chr5 131626380 131626665 -68003485 + AluJb SINE Alu 1 284 -28 1276 347 61 27 chr5 131626665 131626677 -68003473 - HERVL LTR ERVL -1407 4078 4068 207 0 0 0 chr5 131626677 131626700 -68003450 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1276 347 61 27 chr5 131626700 131627282 -68002868 - HERVL LTR ERVL -1417 4068 3351 321 224 12 12 chr5 131627595 131627680 -68002470 + LTR41 LTR ERVL 1 85 -688 526 172 0 0 chr5 131627947 131628040 -68002110 + LTR41 LTR ERVL 91 183 -590 354 186 157 43 chr5 131628303 131628372 -68001778 - L1MA9 LINE L1 -2 6310 6250 1841 179 0 10 chr5 131628372 131628674 -68001476 - AluJo SINE Alu -13 299 1 354 186 157 43 chr5 131628674 131628744 -68001406 - L1MA9 LINE L1 -62 6250 6155 3063 263 71 41 chr5 131628810 131630027 -68000123 - HERVL LTR ERVL -2038 2958 1706 1465 213 31 0 chr5 131630129 131630449 -67999701 - MER58B DNA MER1_type -11 330 1 638 356 49 0 chr5 131630463 131630769 -67999381 - HERVL LTR ERVL -3420 1576 1256 189 306 0 0 chr5 131631096 131631145 -67999005 + MIR SINE MIR 98 146 -62 838 325 62 42 chr5 131631162 131631661 -67998489 - LTR67 LTR ERVL -17 540 32 290 154 0 0 chr5 131631746 131631798 -67998352 + MIR3 SINE MIR 157 208 0 219 88 0 0 chr5 131631920 131631954 -67998196 + (CA)n Simple_repeat Simple_repeat 1 34 0 400 260 49 8 chr5 131632831 131632954 -67997196 + MIR SINE MIR 48 175 -87 447 309 27 40 chr5 131633294 131633510 -67996640 + LTR16B LTR ERVL 166 378 -86 2085 131 28 43 chr5 131633510 131633906 -67996244 - MLT1B LTR MaLR 0 390 1 447 309 27 40 chr5 131633906 131633990 -67996160 + LTR16B LTR ERVL 378 462 -2 354 185 46 0 chr5 131634481 131634546 -67995604 + L2 LINE L2 3241 3308 -5 459 320 142 0 chr5 131634547 131634744 -67995406 - MIR SINE MIR 0 262 38 206 256 0 0 chr5 131635337 131635380 -67994770 - L2 LINE L2 -16 3297 3255 930 171 24 14 chr5 131635380 131635590 -67994560 + MER96B DNA MER1_type? 1 212 -205 488 335 53 5 chr5 131635719 131635907 -67994243 + MIR SINE MIR 17 213 -49 459 79 0 26 chr5 131636253 131636329 -67993821 - L1PA7 LINE L1 0 6154 6081 560 309 92 0 chr5 131636494 131636711 -67993439 + MIR SINE MIR 14 250 -12 788 168 0 0 chr5 131636720 131636851 -67993299 + FLAM_C SINE Alu 1 131 -2 2145 156 142 19 chr5 131637608 131638095 -67992055 - L1MB5 LINE L1 -1 6173 5627 2130 145 0 6 chr5 131638126 131638437 -67991713 - AluSx SINE Alu -3 309 1 293 351 77 83 chr5 131639927 131640397 -67989753 - L2 LINE L2 -2 3270 2804 1570 180 25 28 chr5 131641368 131641652 -67988498 + AluJb SINE Alu 5 287 -25 1788 182 0 3 chr5 131642862 131643241 -67986909 - AluJb SINE Alu 0 378 1 23 68 0 0 chr5 131644515 131644559 -67985591 + AT_rich Low_complexity Low_complexity 1 44 0 717 341 27 7 chr5 131645857 131646153 -67983997 + LTR16A LTR ERVL 110 411 -39 279 288 131 19 chr5 131646563 131646723 -67983427 - MIR3 SINE MIR -1 207 30 21 0 0 0 chr5 131649372 131649393 -67980757 + AT_rich Low_complexity Low_complexity 1 21 0 180 328 0 33 chr5 131649407 131649468 -67980682 - L2 LINE L2 0 3313 3255 218 328 67 106 chr5 131649526 131649810 -67980340 - L2 LINE L2 -182 3090 2818 767 347 161 17 chr5 131649847 131650686 -67979464 - L2 LINE L2 -871 2443 1484 187 400 27 13 chr5 131650840 131650990 -67979160 - L2 LINE L2 -2200 1114 963 1653 170 45 21 chr5 131651060 131651348 -67978802 - AluJb SINE Alu -16 296 2 1673 210 26 24 chr5 131651385 131651888 -67978262 - L1MD2 LINE L1 -10 6349 5794 955 220 26 15 chr5 131651890 131652123 -67978027 - L1MD2 LINE L1 -582 5573 5402 23 0 0 0 chr5 131653193 131653216 -67976934 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr5 131654010 131654030 -67976120 + (T)n Simple_repeat Simple_repeat 1 20 0 24 0 0 0 chr5 131654203 131654227 -67975923 + AT_rich Low_complexity Low_complexity 1 24 0 337 290 8 38 chr5 131654505 131654636 -67975514 + MIR SINE MIR 87 213 -49 2818 3 0 0 chr5 131655057 131655359 -67974791 + AluYa5 SINE Alu 1 302 -9 26 30 0 0 chr5 131656603 131656636 -67973514 + AT_rich Low_complexity Low_complexity 1 33 0 1186 164 0 0 chr5 131657853 131658036 -67972114 - AluSg/x SINE Alu 0 310 128 210 91 0 0 chr5 131658057 131658090 -67972060 + (TG)n Simple_repeat Simple_repeat 2 34 0 204 163 0 0 chr5 131658323 131658366 -67971784 + (TG)n Simple_repeat Simple_repeat 2 44 0 1252 129 0 0 chr5 131660248 131660419 -67969731 + AluSg/x SINE Alu 129 299 -13 411 143 26 0 chr5 131660961 131661038 -67969112 + L1MA4 LINE L1 6101 6179 -121 357 24 0 0 chr5 131662641 131662683 -67967467 + (TG)n Simple_repeat Simple_repeat 1 42 0 442 273 97 17 chr5 131662779 131663017 -67967133 + L1M4 LINE L1 3256 3512 -2634 1986 132 0 30 chr5 131663111 131663372 -67966778 - L1PA14 LINE L1 -1 6160 5910 2104 126 0 10 chr5 131663372 131663681 -67966469 - AluSq SINE Alu -6 307 2 1986 132 0 30 chr5 131663681 131663752 -67966398 - L1PA14 LINE L1 -251 5910 5838 320 289 102 22 chr5 131663876 131664101 -67966049 + L1M4 LINE L1 3789 4031 -2115 231 311 20 33 chr5 131664181 131664332 -67965818 + L1M2 LINE L1 2437 2585 -4264 602 211 8 0 chr5 131664896 131665019 -67965131 + L1ME LINE L1 6 129 -5941 1964 168 0 0 chr5 131665048 131665352 -67964798 + AluSx SINE Alu 1 304 -8 5646 133 48 19 chr5 131665352 131667066 -67963084 - L1PA13 LINE L1 -16 6147 4384 611 273 24 38 chr5 131667390 131667599 -67962551 + L1ME LINE L1 393 598 -5472 894 201 6 0 chr5 131667599 131667763 -67962387 - MER58B DNA MER1_type 0 341 177 1436 284 72 17 chr5 131667848 131668801 -67961349 + L1ME LINE L1 660 1564 -4516 524 203 42 0 chr5 131669085 131669203 -67960947 + MER58B DNA MER1_type 202 324 -17 21 0 0 0 chr5 131669349 131669370 -67960780 + AT_rich Low_complexity Low_complexity 1 21 0 912 269 110 50 chr5 131669372 131670016 -67960134 + L1ME LINE L1 2049 2731 -3349 * 1712 240 83 33 chr5 131670013 131670914 -67959236 - L1ME LINE L1 -519 5643 4707 317 71 0 0 chr5 131671013 131671055 -67959095 + MADE1 DNA Mariner 1 42 -38 265 175 258 62 chr5 131672059 131672156 -67957994 - L2 LINE L2 0 3313 3198 1923 168 42 0 chr5 131672258 131672591 -67957559 - MER7A DNA MER2_type 0 346 2 5776 123 13 11 chr5 131672774 131673877 -67956273 - L1PA14 LINE L1 0 6161 5003 570 308 219 3 chr5 131673877 131674205 -67955945 + L2 LINE L2 1963 2361 -953 * 1036 284 74 27 chr5 131674204 131674570 -67955580 + L2 LINE L2 2929 3311 -2 247 303 90 62 chr5 131675028 131675206 -67954944 + MIR SINE MIR 6 188 -74 398 20 0 0 chr5 131675206 131675256 -67954894 - L1PA6 LINE L1 -1114 5032 4983 6942 60 1 9 chr5 131675256 131676410 -67953740 + L1PA6 LINE L1 5008 6154 0 207 175 35 70 chr5 131676905 131676962 -67953188 - L2 LINE L2 -459 2855 2801 2443 67 0 22 chr5 131677092 131677405 -67952745 - AluY SINE Alu -3 308 3 341 224 201 52 chr5 131677476 131677610 -67952540 - L2 LINE L2 -2 3311 3158 944 174 23 64 chr5 131678378 131678597 -67951553 - MER2 DNA MER2_type -135 210 1 298 282 103 8 chr5 131679263 131679380 -67950770 - MIR SINE MIR -44 218 91 342 0 0 0 chr5 131681510 131681548 -67948602 + (CA)n Simple_repeat Simple_repeat 2 39 0 865 274 118 0 chr5 131683621 131683927 -67946223 + L1MEc LINE L1 41 382 -6014 1485 209 219 27 chr5 131683927 131684401 -67945749 - MLT1F1 LTR MaLR 0 567 3 5479 120 18 6 chr5 131684426 131685258 -67944892 - HSMAR2 DNA Mariner -2 1300 459 1841 268 74 45 chr5 131685427 131685669 -67944481 + L1MEc LINE L1 539 773 -5442 1735 197 3 0 chr5 131685669 131685959 -67944191 - AluJb SINE Alu -21 291 1 1841 268 74 45 chr5 131685959 131686716 -67943434 + L1MEc LINE L1 773 1504 -4711 1638 199 19 6 chr5 131686723 131687045 -67943105 + MER7A DNA MER2_type 1 324 -22 2085 139 0 3 chr5 131687046 131687349 -67942801 + AluSq SINE Alu 2 303 -10 1104 233 45 0 chr5 131687386 131687717 -67942433 - L1M4 LINE L1 -874 5272 4927 * 2386 235 79 25 chr5 131687708 131688457 -67941693 + L1ME1 LINE L1 5386 6334 0 575 318 71 41 chr5 131688532 131688623 -67941527 + L2 LINE L2 2385 2472 -842 2349 98 3 0 chr5 131688623 131688928 -67941222 - AluSx SINE Alu -6 306 1 575 318 71 41 chr5 131688928 131688978 -67941172 + L2 LINE L2 2472 2519 -795 1377 116 22 0 chr5 131688978 131689203 -67940947 - L1PA8 LINE L1 0 6172 5943 575 318 71 41 chr5 131689203 131689523 -67940627 + L2 LINE L2 2519 2861 -453 245 61 122 20 chr5 131689782 131689831 -67940319 - HSMAR1 DNA Mariner -1233 54 1 224 54 54 0 chr5 131691187 131691224 -67938926 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 253 295 16 39 chr5 131691837 131691966 -67938184 + LTR67 LTR ERVL 432 557 0 359 307 92 36 chr5 131692349 131692652 -67937498 + HERVL LTR ERVL 1203 1522 -4132 380 300 177 10 chr5 131693376 131693628 -67936522 - MLT1J2 LTR MaLR -149 301 1 1075 294 83 19 chr5 131693635 131694054 -67936096 + HERVL LTR ERVL 2145 2590 -3174 253 380 29 5 chr5 131694212 131694417 -67935733 + HERVL LTR ERVL 3787 3996 -1658 309 338 76 40 chr5 131694866 131695390 -67934760 + L1MC/D LINE L1 5255 5797 -2011 1467 229 41 21 chr5 131697762 131698285 -67931865 - L1MCc LINE L1 -4887 1536 1047 301 282 99 66 chr5 131698290 131698471 -67931679 - L1MCc LINE L1 -5418 1005 819 22 0 0 0 chr5 131698525 131698547 -67931603 + AT_rich Low_complexity Low_complexity 1 22 0 534 350 73 24 chr5 131699101 131699689 -67930461 - ERVL LTR ERVL -1350 4343 3685 2237 197 27 41 chr5 131699959 131700446 -67929704 + MLT2B3 LTR ERVL 75 554 0 393 152 6 81 chr5 131700581 131700713 -67929437 - AluSg/x SINE Alu -21 281 191 412 157 0 0 chr5 131700798 131700868 -67929282 - FLAM SINE Alu -32 111 42 4356 172 17 7 chr5 131700868 131702556 -67927594 - L1PB2 LINE L1 -179 5972 4265 1751 222 46 25 chr5 131802582 131803064 -67827086 - L1ME1 LINE L1 -289 5877 5386 1104 233 45 0 chr5 131803055 131803386 -67826764 + L1M4 LINE L1 4927 5272 -874 * 2085 139 0 3 chr5 131803423 131803726 -67826424 - AluSq SINE Alu -10 303 2 1638 199 19 6 chr5 131803727 131804049 -67826101 - MER7A DNA MER2_type -22 324 1 1841 268 74 45 chr5 131804056 131804813 -67825337 - L1MEc LINE L1 -4711 1504 773 1735 197 3 0 chr5 131804813 131805103 -67825047 + AluJb SINE Alu 1 291 -21 1841 268 74 45 chr5 131805103 131805345 -67824805 - L1MEc LINE L1 -5442 773 539 5479 120 18 6 chr5 131805514 131806346 -67823804 + HSMAR2 DNA Mariner 459 1300 -2 1485 209 219 27 chr5 131806371 131806845 -67823305 + MLT1F1 LTR MaLR 3 567 0 865 274 118 0 chr5 131806845 131807151 -67822999 - L1MEc LINE L1 -6014 382 41 342 0 0 0 chr5 131809224 131809262 -67820888 + (TG)n Simple_repeat Simple_repeat 2 39 0 376 274 55 111 chr5 131811178 131811485 -67818665 - L1M2 LINE L1 -5881 968 679 186 118 0 0 chr5 131811492 131811526 -67818624 + (CCCCCG)n Simple_repeat Simple_repeat 3 36 0 610 121 40 0 chr5 131812653 131812752 -67817398 - L1MB3 LINE L1 -13 6170 6068 437 62 0 16 chr5 131813373 131813437 -67816713 + L1PA6 LINE L1 6089 6151 -3 232 238 127 0 chr5 131813749 131813812 -67816338 + MIR3 SINE MIR 95 165 -43 194 379 57 33 chr5 131814018 131814229 -67815921 - L2 LINE L2 -210 3062 2847 21 0 0 0 chr5 131816475 131816496 -67813654 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 131816654 131816679 -67813471 + AT_rich Low_complexity Low_complexity 1 25 0 31 26 0 0 chr5 131817088 131817126 -67813024 + AT_rich Low_complexity Low_complexity 1 38 0 342 346 65 12 chr5 131817445 131817786 -67812364 + HAL1 LINE L1 1300 1658 -849 321 345 124 38 chr5 131818016 131818387 -67811763 - L1MC/D LINE L1 -1967 5841 5439 2256 88 0 0 chr5 131818398 131818682 -67811468 - AluSc SINE Alu -25 284 1 230 221 81 47 chr5 131818690 131818827 -67811323 - L1MC/D LINE L1 -2363 5445 5301 1897 150 0 0 chr5 131818827 131819107 -67811043 - AluSx SINE Alu -32 280 1 230 221 81 47 chr5 131819107 131819118 -67811032 - L1MC/D LINE L1 -2507 5301 5292 21 0 0 0 chr5 131819229 131819250 -67810900 + AT_rich Low_complexity Low_complexity 1 21 0 293 307 33 10 chr5 131819467 131819637 -67810513 + L1ME LINE L1 5538 5707 -414 228 361 0 0 chr5 131820647 131820730 -67809420 - MIR3 SINE MIR -3 205 123 1038 180 0 0 chr5 131821240 131821412 -67808738 + AluJo SINE Alu 127 298 -14 444 113 52 0 chr5 131821433 131821530 -67808620 + GA-rich Low_complexity Low_complexity 1 102 0 195 42 0 0 chr5 131821544 131821568 -67808582 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 4782 107 17 6 chr5 131821583 131822305 -67807845 - L1PA13 LINE L1 -1 6162 5433 41 78 0 0 chr5 131822776 131822866 -67807284 + AT_rich Low_complexity Low_complexity 1 90 0 322 319 43 37 chr5 131822868 131823031 -67807119 + HAL1 LINE L1 1293 1456 -1051 207 0 0 0 chr5 131823124 131823147 -67807003 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 23 54 0 0 chr5 131823744 131823781 -67806369 + AT_rich Low_complexity Low_complexity 1 37 0 3013 181 44 14 chr5 131823933 131824597 -67805553 - L1MB7 LINE L1 -10 6174 5491 851 192 56 23 chr5 131824598 131824812 -67805338 - L1MB8 LINE L1 -30 6148 5928 * 2420 224 44 34 chr5 131824788 131825582 -67804568 - L1MB7 LINE L1 -687 5491 4685 2008 139 3 0 chr5 131825582 131825876 -67804274 + AluSx SINE Alu 2 296 -16 2420 224 44 34 chr5 131825876 131825969 -67804181 - L1MB7 LINE L1 -1493 4685 4594 219 297 110 34 chr5 131826294 131826452 -67803698 - MIR SINE MIR -31 177 2 1397 195 37 17 chr5 131828573 131828871 -67801279 - AluJo SINE Alu -8 304 1 284 352 104 5 chr5 131828974 131829167 -67800983 - MIR SINE MIR -1 261 50 2474 244 107 30 chr5 131829509 131830696 -67799454 + L1ME1 LINE L1 4142 5418 -753 675 255 171 14 chr5 131830693 131831068 -67799082 + L1ME1 LINE L1 5650 6100 -65 * 1947 122 31 57 chr5 131831099 131831484 -67798666 - THE1C LTR MaLR 0 375 1 293 260 0 0 chr5 131833586 131833663 -67796487 - L1M4 LINE L1 -852 5294 5218 568 214 29 7 chr5 131833793 131833933 -67796217 + MIR SINE MIR 64 206 -56 843 136 108 103 chr5 131833946 131834159 -67795991 - MER20 DNA MER1_type -2 217 4 396 319 14 61 chr5 131834393 131834627 -67795523 - L1ME LINE L1 -432 5689 5468 446 338 93 31 chr5 131835030 131835483 -67794667 - L1ME3 LINE L1 -212 5950 5470 3890 246 84 28 chr5 131835503 131836347 -67793803 + L1M4 LINE L1 2557 3352 -2794 1944 135 7 0 chr5 131836347 131836651 -67793499 - AluSx SINE Alu 0 306 1 3890 246 84 28 chr5 131836651 131837306 -67792844 + L1M4 LINE L1 3352 4162 -1984 261 0 0 0 chr5 131837306 131837335 -67792815 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 3890 246 84 28 chr5 131837335 131837491 -67792659 + L1M4 LINE L1 4162 4308 -1838 24 32 0 0 chr5 131837727 131837758 -67792392 + AT_rich Low_complexity Low_complexity 1 31 0 26 30 0 0 chr5 131838045 131838078 -67792072 + AT_rich Low_complexity Low_complexity 1 33 0 474 288 0 9 chr5 131841070 131841253 -67788897 + MIR SINE MIR 18 257 -5 232 294 32 87 chr5 131842007 131842133 -67788017 + L3 LINE CR1 5 123 -1454 2178 92 0 20 chr5 131842356 131842651 -67787499 - AluY SINE Alu -22 289 1 278 313 70 28 chr5 131842653 131842867 -67787283 - L1ME LINE L1 -552 5569 5347 2359 144 54 7 chr5 131843329 131843738 -67786412 - MSTA LTR MaLR 0 428 1 423 132 0 0 chr5 131843856 131843924 -67786226 + (TG)n Simple_repeat Simple_repeat 2 69 0 284 359 66 29 chr5 131844923 131845196 -67784954 + L3 LINE CR1 565 847 -730 22 0 0 0 chr5 131845328 131845350 -67784800 + AT_rich Low_complexity Low_complexity 1 22 0 1356 295 83 29 chr5 131845624 131846214 -67783936 + L2 LINE L2 1931 2552 -762 273 345 56 43 chr5 131846843 131847075 -67783075 + L3 LINE CR1 1316 1550 -27 262 351 0 36 chr5 131847068 131847179 -67782971 - L3 LINE CR1 -440 1137 1031 * 324 268 61 0 chr5 131847674 131847756 -67782394 + L2 LINE L2 3223 3309 -4 1397 307 48 67 chr5 131848583 131849407 -67780743 + L2 LINE L2 2031 2839 -475 216 239 0 99 chr5 131849530 131849601 -67780549 + L2 LINE L2 2591 2654 -660 243 355 80 22 chr5 131850238 131850376 -67779774 + L2 LINE L2 3122 3267 -5 598 235 104 35 chr5 131850857 131851146 -67779004 + Charlie8 DNA MER1_type 368 676 -1741 265 316 149 0 chr5 131852057 131852171 -67777979 + L2 LINE L2 3178 3308 -5 215 339 9 9 chr5 131852319 131852434 -67777716 + (TA)n Simple_repeat Simple_repeat 1 115 0 223 156 0 78 chr5 131852517 131852581 -67777569 + A-rich Low_complexity Low_complexity 5 63 0 436 306 38 40 chr5 131852928 131853150 -67777000 + MIR SINE MIR 4 224 -38 334 371 12 24 chr5 131853732 131853902 -67776248 + MIR3 SINE MIR 34 201 -7 184 346 168 10 chr5 131854128 131854229 -67775921 - L2 LINE L2 -17 3255 3139 1863 134 39 0 chr5 131854909 131855193 -67774957 + AluSx SINE Alu 1 295 -17 3419 155 50 0 chr5 131855757 131856212 -67773938 - L1MA8 LINE L1 -27 6264 5768 363 23 0 0 chr5 131856212 131856256 -67773894 + (CA)n Simple_repeat Simple_repeat 2 45 0 3419 155 50 0 chr5 131856256 131856418 -67773732 - L1MA8 LINE L1 -523 5768 5616 846 70 0 0 chr5 131857789 131857904 -67772246 - L1PA4 LINE L1 -3 6152 6038 32 0 0 0 chr5 131858236 131858268 -67771882 + AT_rich Low_complexity Low_complexity 1 32 0 24 32 0 0 chr5 131858728 131858759 -67771391 + AT_rich Low_complexity Low_complexity 1 31 0 246 105 0 0 chr5 131858998 131859036 -67771114 + (TG)n Simple_repeat Simple_repeat 1 38 0 327 183 0 0 chr5 131859056 131859138 -67771012 + GA-rich Low_complexity Low_complexity 2 83 0 27 49 0 0 chr5 131861650 131861691 -67768459 + AT_rich Low_complexity Low_complexity 1 41 0 207 0 0 0 chr5 131862209 131862232 -67767918 + (TA)n Simple_repeat Simple_repeat 1 23 0 298 349 30 38 chr5 131862704 131862836 -67767314 + MIR3 SINE MIR 15 145 -63 437 288 113 17 chr5 131863067 131863244 -67766906 + MIR SINE MIR 16 209 -53 207 310 0 0 chr5 131863283 131863341 -67766809 - L2 LINE L2 -336 2977 2920 307 346 127 26 chr5 131864066 131864491 -67765659 + L2 LINE L2 1932 2399 -915 226 254 8 82 chr5 131864684 131864704 -67765446 - MIR SINE MIR -1 261 241 957 166 12 30 chr5 131864704 131864873 -67765277 + FRAM SINE Alu 1 166 0 226 254 8 82 chr5 131864873 131864986 -67765164 - MIR SINE MIR -21 241 138 7390 122 5 4 chr5 131864994 131866820 -67763330 - L1MA1 LINE L1 0 6302 4476 13885 161 20 10 chr5 131866920 131871157 -67758993 - L1 LINE L1 -1032 6533 2257 2573 209 64 2 chr5 131871163 131871693 -67758457 - L1 LINE L1 -6549 1016 454 200 269 29 77 chr5 131871824 131871928 -67758222 + L2 LINE L2 2577 2675 -639 343 326 39 51 chr5 131872014 131872192 -67757958 + MER5A DNA MER1_type 14 189 0 302 320 165 15 chr5 131873457 131873657 -67756493 - MIR SINE MIR -2 260 31 599 283 47 104 chr5 131873682 131874008 -67756142 - MLT1J LTR MaLR -179 271 1 201 147 0 0 chr5 131874269 131874303 -67755847 + (TA)n Simple_repeat Simple_repeat 2 35 0 236 213 0 64 chr5 131874309 131874403 -67755747 - L1MC4 LINE L1 -1343 6699 6612 354 138 0 0 chr5 131874540 131874598 -67755552 + (TA)n Simple_repeat Simple_repeat 2 59 0 1973 137 3 0 chr5 131875005 131875304 -67754846 + AluSx SINE Alu 1 300 -12 260 49 49 0 chr5 131875379 131875420 -67754730 + (AATAG)n Simple_repeat Simple_repeat 1 43 0 250 233 17 0 chr5 131875778 131875838 -67754312 + L1MB8 LINE L1 6113 6173 -5 265 302 38 0 chr5 131875846 131875952 -67754198 - L1ME3A LINE L1 -5 6165 6056 6345 105 16 13 chr5 131875960 131876916 -67753234 + L1P LINE L1 4407 5365 -766 368 213 0 0 chr5 131876916 131876989 -67753161 + L1PA3 LINE L1 6062 6136 -19 6345 105 16 13 chr5 131876989 131877034 -67753116 + L1P LINE L1 5365 5408 -723 1445 273 87 37 chr5 131877005 131877766 -67752384 - L1ME3A LINE L1 -114 6056 5260 * 396 281 118 15 chr5 131878243 131878378 -67751772 - MIR SINE MIR -85 177 29 240 137 0 0 chr5 131878992 131879043 -67751107 + (TATG)n Simple_repeat Simple_repeat 2 52 0 418 76 15 0 chr5 131879045 131879111 -67751039 - L1MA3 LINE L1 -6 6299 6233 22 56 0 0 chr5 131879119 131879155 -67750995 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr5 131879849 131879879 -67750271 + AT_rich Low_complexity Low_complexity 1 30 0 213 39 0 0 chr5 131880674 131880700 -67749450 + (TTG)n Simple_repeat Simple_repeat 2 27 0 346 384 49 0 chr5 131881696 131881941 -67748209 + L1ME2 LINE L1 778 1034 -6104 512 246 38 7 chr5 131882310 131882510 -67747640 + L1ME2 LINE L1 1346 1611 -5336 368 194 41 26 chr5 131882524 131882636 -67747514 + L1M3c LINE L1 1265 1788 -4525 334 246 77 91 chr5 131882636 131882856 -67747294 + L1ME2 LINE L1 2105 2321 -4636 2501 232 94 76 chr5 131882891 131883575 -67746575 + L1ME2 LINE L1 4810 5480 -1495 1802 167 0 0 chr5 131883575 131883885 -67746265 + AluSx SINE Alu 1 310 0 2501 232 94 76 chr5 131883885 131885049 -67745101 + L1ME2 LINE L1 5480 6704 -271 2004 128 0 14 chr5 131885049 131885346 -67744804 + AluSx SINE Alu 1 293 -19 2501 232 94 76 chr5 131885346 131885614 -67744536 + L1ME2 LINE L1 6704 6966 -9 6946 37 1 2 chr5 131885638 131886521 -67743629 - L1PA3 LINE L1 -2807 3339 2458 16669 30 3 2 chr5 131886521 131889307 -67740843 + L1PA3 LINE L1 3354 6155 0 7122 36 7 0 chr5 131889307 131890161 -67739989 + L1PA4 LINE L1 5276 6147 -8 352 227 86 37 chr5 131890435 131890598 -67739552 - L1ME4a LINE L1 -59 6062 5892 403 230 108 93 chr5 131891249 131891329 -67738821 - L1ME4a LINE L1 -207 5914 5837 1980 180 98 28 chr5 131891329 131891801 -67738349 + MLT1D LTR MaLR 1 505 0 403 230 108 93 chr5 131891801 131892063 -67738087 - L1ME4a LINE L1 -284 5837 5567 362 286 86 9 chr5 131894000 131894105 -67736045 + MER91C DNA MER1_type 11 123 -17 246 299 16 47 chr5 131894275 131894402 -67735748 - LTR67 LTR ERVL -2 555 433 2229 88 7 19 chr5 131895275 131895583 -67734567 - AluSp SINE Alu -9 304 1 342 354 112 28 chr5 131896739 131897156 -67732994 + L1MEd LINE L1 19 493 -5626 24 32 0 0 chr5 131897379 131897410 -67732740 + AT_rich Low_complexity Low_complexity 1 31 0 579 328 15 4 chr5 131897501 131897763 -67732387 + L1MEd LINE L1 945 1209 -4910 7122 17 0 2 chr5 131897804 131898633 -67731517 + L1PA2 LINE L1 5329 6155 0 1675 242 92 11 chr5 131899232 131899699 -67730451 + MLT1D LTR MaLR 1 505 0 6652 37 1 27 chr5 131899843 131901468 -67728682 + L1PA4 LINE L1 4577 6187 0 288 188 0 0 chr5 131902080 131902144 -67728006 + (TA)n Simple_repeat Simple_repeat 2 65 0 241 256 22 22 chr5 131902144 131902234 -67727916 - L1MC4 LINE L1 -1339 6703 6614 209 167 0 42 chr5 131902234 131902282 -67727868 + (TATATG)n Simple_repeat Simple_repeat 4 49 0 225 258 22 22 chr5 131902282 131902371 -67727779 + L1MC4 LINE L1 6614 6702 -1340 231 173 39 0 chr5 131902395 131902447 -67727703 + L1MC4 LINE L1 6649 6702 -1340 231 173 39 0 chr5 131902471 131902523 -67727627 + L1MC4 LINE L1 6649 6702 -1340 231 173 39 0 chr5 131902547 131902599 -67727551 + L1MC4 LINE L1 6649 6702 -1340 231 173 39 0 chr5 131902585 131902637 -67727513 + L1MC4 LINE L1 6649 6702 -1340 231 173 39 0 chr5 131902661 131902713 -67727437 + L1MC4 LINE L1 6649 6702 -1340 228 236 0 0 chr5 131902737 131902792 -67727358 + L1MC4 LINE L1 6649 6703 -1339 * 303 230 46 23 chr5 131902748 131902835 -67727315 - L1MC4 LINE L1 -1339 6703 6615 285 151 0 0 chr5 131902797 131902850 -67727300 + (TA)n Simple_repeat Simple_repeat 1 53 0 * 295 289 22 0 chr5 131902857 131902947 -67727203 - L2 LINE L2 -1343 1971 1880 256 258 56 22 chr5 131903185 131903274 -67726876 - MIR SINE MIR -1 261 170 649 286 25 15 chr5 131903279 131903475 -67726675 - MIR SINE MIR -46 216 19 21 0 0 0 chr5 131903572 131903593 -67726557 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 131904432 131904457 -67725693 + AT_rich Low_complexity Low_complexity 1 25 0 935 195 128 79 chr5 131905892 131906220 -67723930 - MER2 DNA MER2_type 0 344 1 406 275 94 12 chr5 131906602 131906762 -67723388 + MLT1L LTR MaLR 430 602 -13 257 279 58 87 chr5 131907341 131907513 -67722637 - MIR SINE MIR -32 230 64 * 432 329 59 0 chr5 131907468 131907620 -67722530 + MIR SINE MIR 20 180 -82 199 291 51 25 chr5 131907693 131907772 -67722378 - MIR SINE MIR -90 118 38 253 211 113 0 chr5 131908257 131908328 -67721822 + HsTC2 DNA Tc2 22 100 -1798 1414 215 30 86 chr5 131908469 131909004 -67721146 + MLT1D LTR MaLR 1 505 0 1863 151 3 22 chr5 131909323 131909641 -67720509 + AluSx SINE Alu 1 312 0 788 287 41 21 chr5 131909924 131910262 -67719888 + L1ME LINE L1 3803 4147 -1999 408 309 105 14 chr5 131910349 131910702 -67719448 + L1ME LINE L1 4298 4682 -1464 247 231 163 81 chr5 131911045 131911205 -67718945 - MER104 DNA Tc2 0 180 8 572 299 59 38 chr5 131911252 131911673 -67718477 + L1ME LINE L1 5259 5688 -482 394 296 30 69 chr5 131911873 131912207 -67717943 - L1MEc LINE L1 -4443 2109 1777 421 268 134 29 chr5 131912374 131912620 -67717530 - L1MEc LINE L1 -5785 745 474 4793 208 81 30 chr5 131912902 131913317 -67716833 - Charlie1a DNA MER1_type -1307 1454 1062 2027 18 0 0 chr5 131913317 131913542 -67716608 + AluYb8 SINE Alu 86 310 -8 4793 208 81 30 chr5 131913542 131913804 -67716346 - Charlie1a DNA MER1_type -1699 1062 815 446 0 0 18 chr5 131913804 131913859 -67716291 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 4793 208 81 30 chr5 131913859 131914556 -67715594 - Charlie1a DNA MER1_type -1946 815 9 213 39 0 0 chr5 131914612 131914638 -67715512 + (TG)n Simple_repeat Simple_repeat 2 27 0 26 50 0 0 chr5 131915622 131915662 -67714488 + AT_rich Low_complexity Low_complexity 1 40 0 693 156 170 21 chr5 131915755 131915896 -67714254 + MLT1E3 LTR MaLR 1 162 -462 1317 109 0 5 chr5 131915911 131916103 -67714047 - AluSg/x SINE Alu -19 293 103 1194 222 8 0 chr5 131916125 131916359 -67713791 + MLT1E2 LTR MaLR 386 621 -5 321 287 98 0 chr5 131916904 131917026 -67713124 + MER94 DNA DNA 1 134 0 26 0 0 0 chr5 131917067 131917093 -67713057 + AT_rich Low_complexity Low_complexity 1 26 0 197 193 23 159 chr5 131917487 131917575 -67712575 - L2 LINE L2 -2 3270 3195 26 30 0 0 chr5 131917952 131917985 -67712165 + AT_rich Low_complexity Low_complexity 1 33 0 378 389 40 27 chr5 131918359 131918660 -67711490 + L1MDa LINE L1 25 329 -6211 4152 246 73 74 chr5 131919121 131920529 -67709621 + L1MDa LINE L1 917 2325 -4215 1642 199 0 7 chr5 131920529 131920811 -67709339 + AluJo SINE Alu 3 282 -30 4152 246 73 74 chr5 131920811 131924091 -67706059 + L1MDa LINE L1 2325 5500 -1040 547 238 33 0 chr5 131974442 131974564 -67655586 - MER58A DNA MER1_type 0 127 2 26 30 0 0 chr5 131974698 131974731 -67655419 + AT_rich Low_complexity Low_complexity 1 33 0 4173 187 42 40 chr5 131974785 131976201 -67653949 - L1MA8 LINE L1 -1 6290 4849 9272 107 2 28 chr5 131976205 131977092 -67653058 - L1P LINE L1 -3169 2977 2143 4514 30 2 2 chr5 131977092 131977633 -67652517 - L1PA4 LINE L1 -2 6153 5613 9272 107 2 28 chr5 131977633 131978245 -67651905 - L1P LINE L1 -4003 2143 1517 * 10739 99 14 2 chr5 131978244 131979886 -67650264 + L1P LINE L1 2983 4643 -1503 382 129 0 44 chr5 131981391 131981459 -67648691 - MER5A DNA MER1_type -118 71 4 425 354 51 42 chr5 131981464 131981795 -67648355 - L2 LINE L2 -547 2767 2434 23 0 0 0 chr5 131983054 131983077 -67647073 + AT_rich Low_complexity Low_complexity 1 23 0 284 367 5 8 chr5 131983973 131984103 -67646047 + MIR SINE MIR 21 111 -97 316 319 11 0 chr5 131984735 131984826 -67645324 - L2 LINE L2 -5 3267 3176 730 291 11 11 chr5 131985027 131985216 -67644934 + MIR SINE MIR 1 189 -73 190 344 11 11 chr5 131985528 131985621 -67644529 - L2 LINE L2 -800 2514 2422 2074 120 3 19 chr5 131986398 131986731 -67643419 - AluSx SINE Alu 0 312 6 594 280 22 11 chr5 131986792 131986974 -67643176 - L1ME1 LINE L1 -65 6101 5918 1206 231 54 8 chr5 131987018 131987404 -67642746 - L1MC3 LINE L1 -167 7618 7215 295 222 111 20 chr5 131987406 131987505 -67642645 - MLT1F1 LTR MaLR -420 147 40 3024 109 86 60 chr5 131987507 131988092 -67642058 + MER4A LTR ERV1 1 600 0 723 159 80 0 chr5 131988108 131988271 -67641879 - L1MC3 LINE L1 -703 7082 6907 670 266 0 0 chr5 131988283 131988482 -67641668 - L1MEc LINE L1 -2085 4061 3863 2113 145 22 32 chr5 131988485 131988892 -67641258 - MER61D LTR ERV1 0 501 99 1259 237 54 86 chr5 131988910 131989645 -67640505 - L1MEc LINE L1 -2286 3860 3166 2266 161 108 95 chr5 131989645 131990327 -67639823 - LTR8 LTR ERV1 0 691 1 1259 237 54 86 chr5 131990327 131990618 -67639532 - L1MEc LINE L1 -2980 3166 2867 447 282 68 28 chr5 131990637 131990885 -67639265 - L1MB7 LINE L1 -25 6159 5902 * 1679 219 46 72 chr5 131990879 131991486 -67638664 - L1MEc LINE L1 -3256 2890 2350 1696 153 60 38 chr5 131991486 131991853 -67638297 + THE1C LTR MaLR 1 375 0 1679 219 46 72 chr5 131991853 131992088 -67638062 - L1MEc LINE L1 -3796 2350 2110 37609 45 5 4 chr5 131992219 131997928 -67632222 - L1PA4 LINE L1 -3 6152 439 16155 160 31 80 chr5 131997944 131998433 -67631717 + L1M1 LINE L1 13 524 -7041 556 191 0 0 chr5 131998433 131998527 -67631623 + FLAM_C SINE Alu 36 129 -14 16155 160 31 80 chr5 131998527 132000700 -67629450 + L1M1 LINE L1 524 2535 -5030 405 0 0 0 chr5 132000700 132000745 -67629405 + (ATTAG)n Simple_repeat Simple_repeat 3 47 0 16155 160 31 80 chr5 132000745 132001778 -67628372 + L1M1 LINE L1 2535 3617 -3948 3978 181 28 48 chr5 132002008 132002268 -67627882 - L1 LINE L1 -1678 5530 5266 2221 113 0 0 chr5 132002268 132002561 -67627589 - AluY SINE Alu -18 293 1 3978 181 28 48 chr5 132002561 132003369 -67626781 - L1 LINE L1 -1942 5266 4483 576 218 6 6 chr5 132003375 132003531 -67626619 - L1 LINE L1 -3009 4199 4044 1744 108 87 54 chr5 132003531 132003865 -67626285 - THE1B LTR MaLR -19 345 1 11398 87 5 2 chr5 132003865 132005439 -67624711 - THE1B-int LTR MaLR 0 1580 1 1959 115 73 53 chr5 132005439 132005796 -67624354 - THE1B LTR MaLR 0 364 1 4158 236 237 8 chr5 132005822 132007277 -67622873 - L1 LINE L1 -5435 1774 1 1152 261 23 43 chr5 132008640 132008989 -67621161 + MLT1H LTR MaLR 3 344 -205 27 29 0 0 chr5 132009263 132009297 -67620853 + AT_rich Low_complexity Low_complexity 1 34 0 672 312 84 61 chr5 132010299 132010904 -67619246 - L1M4 LINE L1 -2322 3824 3206 706 135 0 0 chr5 132010937 132011041 -67619109 - AluSq/x SINE Alu -209 104 1 1522 150 4 16 chr5 132011072 132011318 -67618832 + AluSx SINE Alu 59 301 -11 292 257 162 23 chr5 132011385 132011650 -67618500 - L1M4 LINE L1 -3243 2903 2602 370 184 44 73 chr5 132011811 132011862 -67618288 - L1M4 LINE L1 -3802 2344 2293 2393 84 48 3 chr5 132011862 132012197 -67617953 - L1PA6 LINE L1 -4 6150 5801 370 184 44 73 chr5 132012197 132012281 -67617869 - L1M4 LINE L1 -3853 2293 2213 1117 309 185 24 chr5 132012542 132013261 -67616889 + L2 LINE L2 1632 2466 -848 585 274 0 20 chr5 132013766 132013912 -67616238 + MER20 DNA MER1_type 2 144 -75 17942 174 51 8 chr5 132013912 132017298 -67612852 + L1MA2 LINE L1 15 3252 -4471 1942 166 3 0 chr5 132017298 132017641 -67612509 + L1PA14 LINE L1 5817 6160 -1 17942 174 51 8 chr5 132017641 132021647 -67608503 + L1MA2 LINE L1 3252 7723 0 319 239 11 23 chr5 132021673 132021761 -67608389 + MER20 DNA MER1_type 133 219 0 1053 311 81 40 chr5 132021768 132022502 -67607648 + L2 LINE L2 2544 3312 -1 2108 103 0 32 chr5 132025712 132026024 -67604126 + AluY SINE Alu 1 302 -9 21 0 0 0 chr5 132026641 132026662 -67603488 + AT_rich Low_complexity Low_complexity 1 21 0 865 287 86 46 chr5 132027026 132027399 -67602751 - LTR16C LTR ERVL -15 476 89 647 356 123 29 chr5 132027472 132028161 -67601989 - L2 LINE L2 -337 2977 2224 8095 202 109 29 chr5 132029544 132033624 -67596526 - L1MA8 LINE L1 -72 6455 926 342 210 168 29 chr5 132033690 132033927 -67596223 - L1M4 LINE L1 -663 5511 5257 1807 210 108 83 chr5 132033948 132034866 -67595284 - L1M4 LINE L1 -945 5201 4261 274 243 14 0 chr5 132034887 132034957 -67595193 + L1MC5 LINE L1 7813 7883 -78 5269 174 46 31 chr5 132035787 132036140 -67594010 + L1 LINE L1 4182 4528 -1618 2088 91 42 11 chr5 132036140 132036427 -67593723 + AluY SINE Alu 1 296 -15 5269 174 46 31 chr5 132036427 132037240 -67592910 + L1 LINE L1 4528 5366 -780 1635 117 84 17 chr5 132037235 132037534 -67592616 + L1MA2 LINE L1 5944 6262 -42 * 28 71 0 0 chr5 132037903 132037959 -67592191 + AT_rich Low_complexity Low_complexity 1 56 0 24 53 0 0 chr5 132038057 132038095 -67592055 + AT_rich Low_complexity Low_complexity 1 38 0 2266 104 0 0 chr5 132039447 132039746 -67590404 - AluSx SINE Alu -13 299 1 21 57 0 0 chr5 132039761 132039796 -67590354 + AT_rich Low_complexity Low_complexity 1 35 0 218 335 127 6 chr5 132039880 132040038 -67590112 + L2 LINE L2 3135 3311 -2 2627 163 199 69 chr5 132041254 132042009 -67588141 + L1MCa LINE L1 182 1034 -5392 2270 96 7 3 chr5 132043707 132044010 -67586140 - AluSq SINE Alu -9 304 1 1164 167 4 21 chr5 132048148 132048382 -67581768 - L1MA4A LINE L1 -174 6129 5900 * 6083 174 47 9 chr5 132048372 132049770 -67580380 + L1MB8 LINE L1 4102 5560 -740 462 254 21 58 chr5 132050005 132050194 -67579956 + L1M4b LINE L1 1205 1386 -5473 1304 232 71 44 chr5 132050202 132050321 -67579829 + L1M4b LINE L1 1505 1619 -5338 2005 104 13 7 chr5 132050321 132050619 -67579531 + AluSp SINE Alu 1 300 -13 1304 232 71 44 chr5 132050619 132050671 -67579479 + L1M4b LINE L1 1619 1668 -5289 2063 99 3 45 chr5 132050671 132050985 -67579165 + AluSx SINE Alu 1 301 -11 225 0 0 0 chr5 132050987 132051012 -67579138 + (GA)n Simple_repeat Simple_repeat 2 26 0 1304 232 71 44 chr5 132051012 132051410 -67578740 + L1M4b LINE L1 1668 2579 -4378 667 140 49 14 chr5 132051438 132051581 -67578569 + L1MB8 LINE L1 6012 6159 -19 325 300 54 36 chr5 132051920 132052143 -67578007 + L1M4b LINE L1 3652 3878 -3079 1828 205 2 11 chr5 132052246 132052722 -67577428 + MER77 LTR ERV1 1 523 -82 730 242 122 46 chr5 132053151 132053627 -67576523 + L1M4b LINE L1 3841 4352 -2605 207 363 117 18 chr5 132053752 132054025 -67576125 - L2 LINE L2 -740 2574 2275 356 289 107 47 chr5 132054243 132054568 -67575582 - MLT1L LTR MaLR -223 392 3 302 302 158 29 chr5 132056943 132057187 -67572963 - L1MC/D LINE L1 -2000 5808 5597 1994 108 0 54 chr5 132057187 132057503 -67572647 + AluSx SINE Alu 1 299 -13 302 302 158 29 chr5 132057503 132057668 -67572482 - L1MC/D LINE L1 -2211 5597 5346 381 287 17 43 chr5 132058308 132058423 -67571727 - L2 LINE L2 -2 3311 3200 231 333 132 0 chr5 132058626 132058755 -67571395 - MIR SINE MIR -59 203 58 294 304 152 0 chr5 132058873 132058985 -67571165 + MIR SINE MIR 58 186 -76 29 0 0 0 chr5 132061680 132061709 -67568441 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 132062110 132062145 -67568005 + AT_rich Low_complexity Low_complexity 1 35 0 451 251 5 35 chr5 132062413 132062605 -67567545 + MIR SINE MIR 11 262 0 392 256 0 32 chr5 132064354 132064510 -67565640 + HAL1b LINE L1 681 831 -517 1826 153 58 6 chr5 132066783 132067110 -67563040 + MER2 DNA MER2_type 1 344 0 2046 122 26 7 chr5 132067159 132067463 -67562687 + AluSx SINE Alu 3 312 0 24 67 0 0 chr5 132067529 132067574 -67562576 + AT_rich Low_complexity Low_complexity 1 45 0 2191 98 0 3 chr5 132069140 132069427 -67560723 + AluSg SINE Alu 1 286 -24 2134 108 10 0 chr5 132069568 132069863 -67560287 + AluSx SINE Alu 1 298 -14 562 256 135 75 chr5 132070340 132070687 -67559463 + MLT1J LTR MaLR 100 467 -44 1210 124 6 0 chr5 132070927 132071105 -67559045 - AluSp SINE Alu -14 299 121 1610 245 176 0 chr5 132072199 132072676 -67557474 + MLT1F1 LTR MaLR 1 561 -6 301 42 21 21 chr5 132072676 132072724 -67557426 + (TA)n Simple_repeat Simple_repeat 1 48 0 387 281 169 6 chr5 132073441 132073601 -67556549 - MER5A DNA MER1_type 0 189 4 232 258 45 0 chr5 132073825 132073891 -67556259 - L1MEc LINE L1 -4702 1694 1626 416 196 54 27 chr5 132073932 132074044 -67556106 + FRAM SINE Alu 39 153 -13 24 0 0 0 chr5 132074087 132074111 -67556039 + AT_rich Low_complexity Low_complexity 1 24 0 249 243 40 14 chr5 132074617 132074691 -67555459 - L1MC4 LINE L1 -1024 7018 6943 208 267 27 27 chr5 132075255 132075330 -67554820 - L2 LINE L2 -1346 1968 1894 22 0 0 0 chr5 132075715 132075737 -67554413 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr5 132077323 132077356 -67552794 + AT_rich Low_complexity Low_complexity 1 33 0 3795 166 83 65 chr5 132077706 132077899 -67552251 + MER4D LTR ERV1 1 189 -714 2138 82 34 0 chr5 132077899 132078191 -67551959 + AluY SINE Alu 1 302 -9 3795 166 83 65 chr5 132078191 132078419 -67551731 + MER4D LTR ERV1 189 412 -491 1879 124 4 4 chr5 132078419 132078692 -67551458 + AluSg SINE Alu 28 300 -10 3795 166 83 65 chr5 132078692 132079141 -67551009 + MER4D LTR ERV1 412 887 -16 3008 265 46 22 chr5 132079485 132080401 -67549749 - HERVL40 LTR ERVL -898 4632 3695 329 67 22 0 chr5 132080416 132080461 -67549689 - HERVL40 LTR ERVL -5075 455 410 1722 137 49 82 chr5 132080717 132081105 -67549045 - THE1C LTR MaLR 0 375 1 28 0 0 0 chr5 132082119 132082147 -67548003 + AT_rich Low_complexity Low_complexity 1 28 0 273 237 75 32 chr5 132084121 132084214 -67545936 + MIR SINE MIR 160 256 -6 839 148 0 0 chr5 132084614 132084742 -67545408 + FLAM_A SINE Alu 4 131 -2 226 281 70 26 chr5 132085282 132085396 -67544754 - MIR SINE MIR -68 194 76 309 401 42 26 chr5 132086134 132086398 -67543752 + L1ME3A LINE L1 530 797 -5322 376 263 143 30 chr5 132086446 132087081 -67543069 + L1ME3A LINE L1 854 1857 -4273 39 50 0 0 chr5 132087247 132087307 -67542843 + AT_rich Low_complexity Low_complexity 1 60 0 375 135 0 0 chr5 132087338 132087403 -67542747 + Alu SINE Alu 245 300 0 839 228 77 35 chr5 132087404 132087629 -67542521 + L1MC4 LINE L1 7631 7870 -172 1517 145 47 76 chr5 132087629 132087946 -67542204 - AluJb SINE Alu -2 310 3 839 228 77 35 chr5 132087946 132087979 -67542171 + L1MC4 LINE L1 7870 7900 -142 716 276 118 21 chr5 132088732 132088898 -67541252 + L1ME3A LINE L1 2835 2984 -3145 1136 30 0 0 chr5 132088898 132089032 -67541118 + L1PA4 LINE L1 6011 6144 -11 716 276 118 21 chr5 132089032 132089424 -67540726 + L1ME3A LINE L1 2984 3447 -2682 355 338 0 23 chr5 132089626 132089759 -67540391 + L1ME3A LINE L1 5076 5205 -924 576 262 101 31 chr5 132089819 132090199 -67539951 + L1ME3A LINE L1 5612 6057 -96 2287 73 38 83 chr5 132091060 132091432 -67538718 + THE1A LTR MaLR 1 355 0 1343 192 8 4 chr5 132091549 132091789 -67538361 + AluJo SINE Alu 42 282 -30 1328 189 40 37 chr5 132095549 132095845 -67534305 - AluJo SINE Alu -15 297 1 1723 143 0 11 chr5 132096609 132096875 -67533275 + AluSg SINE Alu 47 309 -1 478 344 101 10 chr5 132096900 132097188 -67532962 + L2 LINE L2 1688 2001 -1313 337 344 38 6 chr5 132097198 132097358 -67532792 + L1MA7 LINE L1 790 954 -5699 10379 186 65 6 chr5 132097373 132098319 -67531831 + L1MA7 LINE L1 868 1757 -5120 2035 154 0 0 chr5 132098319 132098631 -67531519 + AluSx SINE Alu 1 312 0 10379 186 65 6 chr5 132098631 132103653 -67526497 + L1MA7 LINE L1 1757 6857 -20 26 64 0 0 chr5 132104080 132104127 -67526023 + AT_rich Low_complexity Low_complexity 1 47 0 1915 120 55 7 chr5 132104170 132104462 -67525688 - AluSg SINE Alu -4 306 1 31 0 0 0 chr5 132104683 132104714 -67525436 + AT_rich Low_complexity Low_complexity 1 31 0 479 359 60 20 chr5 132104821 132105069 -67525081 - MIR SINE MIR 0 262 5 283 265 59 73 chr5 132105650 132105786 -67524364 - MIR3 SINE MIR -8 200 67 21 0 0 0 chr5 132106184 132106205 -67523945 + AT_rich Low_complexity Low_complexity 1 21 0 565 271 118 73 chr5 132106918 132107441 -67522709 + MLT1H LTR MaLR 4 595 0 2923 215 69 19 chr5 132108002 132108882 -67521268 + MER63C DNA MER1_type 4 927 -3 295 315 71 24 chr5 132110337 132110464 -67519686 - MIR SINE MIR -114 148 16 369 289 92 21 chr5 132110735 132110877 -67519273 - L2 LINE L2 -1 3312 3161 192 200 0 0 chr5 132111072 132111117 -67519033 + (TG)n Simple_repeat Simple_repeat 1 45 0 376 274 108 65 chr5 132111347 132111533 -67518617 + MIR3 SINE MIR 14 207 -1 208 174 58 35 chr5 132111584 132111670 -67518480 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 2123 117 0 0 chr5 132111848 132112177 -67517973 + AluSx SINE Alu 1 329 0 233 265 86 86 chr5 132112182 132112299 -67517851 - MIR3 SINE MIR -49 159 43 2814 3 0 0 chr5 132112708 132113012 -67517138 + AluYa5 SINE Alu 1 304 -7 1760 188 66 41 chr5 132113159 132113642 -67516508 + L1MB8 LINE L1 5657 6151 -27 345 288 98 46 chr5 132113784 132113937 -67516213 + MIR SINE MIR 10 170 -92 21 0 0 0 chr5 132114020 132114041 -67516109 + AT_rich Low_complexity Low_complexity 1 21 0 2448 104 34 8 chr5 132116517 132116872 -67513278 - THE1B LTR MaLR 0 364 1 250 114 0 0 chr5 132118028 132118063 -67512087 + U2 snRNA snRNA 1 35 -153 1121 238 78 0 chr5 132118358 132118614 -67511536 - AluJo SINE Alu -8 304 29 201 354 76 21 chr5 132118728 132118872 -67511278 - MIR3 SINE MIR -19 189 38 1305 250 90 29 chr5 132118960 132119436 -67510714 - MLT1D LTR MaLR 0 505 1 351 257 111 35 chr5 132120816 132120960 -67509190 - LTR67 LTR ERVL -401 156 2 193 98 49 0 chr5 132121320 132121361 -67508789 + (TA)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr5 132121362 132121383 -67508767 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 132121424 132121445 -67508705 + AT_rich Low_complexity Low_complexity 1 21 0 731 264 65 62 chr5 132121464 132121633 -67508517 + L1M3a LINE L1 12 179 -5776 1500 197 37 30 chr5 132121633 132121932 -67508218 + AluSx SINE Alu 1 301 -11 731 264 65 62 chr5 132121932 132122103 -67508047 + L1M3a LINE L1 179 353 -5602 1052 334 67 32 chr5 132122683 132123598 -67506552 + HERV16 LTR ERVL 2536 3527 -1900 1518 215 20 51 chr5 132123617 132124012 -67506138 - MLT2B3 LTR ERVL 0 554 172 3772 236 237 8 chr5 132125226 132126681 -67503469 + L1M1 LINE L1 1 1774 -5435 1989 115 73 53 chr5 132126707 132127064 -67503086 + THE1B LTR MaLR 1 364 0 11806 89 6 2 chr5 132127064 132128638 -67501512 + THE1B-int LTR MaLR 1 1580 0 1744 108 87 54 chr5 132128638 132128972 -67501178 + THE1B LTR MaLR 1 345 -19 576 218 6 6 chr5 132128972 132129128 -67501022 + L1M1 LINE L1 4044 4199 -3009 3973 181 28 48 chr5 132129134 132129942 -67500208 + L1M1 LINE L1 4483 5266 -1942 2248 109 0 0 chr5 132129942 132130235 -67499915 + AluY SINE Alu 1 293 -18 3973 181 28 48 chr5 132130235 132130493 -67499657 + L1M1 LINE L1 5266 5528 -1680 1399 143 0 0 chr5 132130493 132130689 -67499461 + AluSg/x SINE Alu 105 300 -12 3881 169 39 9 chr5 132130689 132131625 -67498525 + L1M1 LINE L1 5546 6507 -743 2186 138 0 0 chr5 132132074 132132379 -67497771 - AluSg SINE Alu -3 307 3 236 212 15 0 chr5 132133220 132133286 -67496864 + (TA)n Simple_repeat Simple_repeat 1 67 0 2010 77 22 0 chr5 132133345 132133690 -67496460 - L1P3 LINE L1 -722 5432 5083 3467 65 0 11 chr5 132133690 132134146 -67496004 + L1PA7 LINE L1 5698 6151 -3 750 242 25 10 chr5 132134292 132134490 -67495660 + Charlie1 DNA MER1_type 57 257 -2504 370 189 0 14 chr5 132134477 132134551 -67495599 + Charlie1 DNA MER1_type 2689 2761 0 * 26 30 0 0 chr5 132134840 132134873 -67495277 + AT_rich Low_complexity Low_complexity 1 33 0 2165 123 3 7 chr5 132134931 132135241 -67494909 + AluSx SINE Alu 1 309 -3 198 0 0 0 chr5 132135483 132135505 -67494645 + (TTA)n Simple_repeat Simple_repeat 3 24 0 17221 35 8 1 chr5 132135505 132138371 -67491779 - L1PA3 LINE L1 -18 6137 3255 320 350 100 0 chr5 132140704 132140904 -67489246 + MERVL LTR ERVL 2058 2277 -3487 282 329 21 0 chr5 132141164 132141286 -67488864 + MERVL LTR ERVL 3125 3220 -2265 378 349 74 0 chr5 132141292 132141507 -67488643 + MERVL LTR ERVL 3323 3553 -2211 7250 183 6 29 chr5 132141673 132142941 -67487209 + L1PA8A LINE L1 5 1252 -5209 2384 65 0 7 chr5 132142941 132143235 -67486915 + AluY SINE Alu 1 292 -19 7250 183 6 29 chr5 132143235 132144243 -67485907 + L1PA8A LINE L1 1252 2282 -4179 2370 158 82 19 chr5 132144315 132144828 -67485322 + LTR10A LTR ERV1 1 545 -64 19214 121 19 25 chr5 132144849 132147958 -67482192 + L1PA8A LINE L1 2285 5362 -1084 2271 120 0 0 chr5 132147958 132148267 -67481883 + AluY SINE Alu 1 309 -2 19214 121 19 25 chr5 132148267 132149327 -67480823 + L1PA8A LINE L1 5362 6426 -20 805 252 69 93 chr5 132149637 132149886 -67480264 - L1M4 LINE L1 -817 5329 5076 13395 32 0 5 chr5 132149886 132152258 -67477892 + L1PA5 LINE L1 3772 6140 -14 805 252 69 93 chr5 132152258 132153056 -67477094 - L1M4 LINE L1 -1070 5076 4307 749 306 25 12 chr5 132153061 132153384 -67476766 - L1ME LINE L1 -5358 712 386 426 244 184 40 chr5 132153410 132153667 -67476483 - L1ME LINE L1 -5744 326 26 5229 82 24 11 chr5 132154007 132154579 -67475571 + MER4E LTR ERV1 1 587 -179 1634 157 0 8 chr5 132154579 132154828 -67475322 - AluSx SINE Alu -10 302 56 5229 82 24 11 chr5 132154828 132155011 -67475139 + MER4E LTR ERV1 587 766 0 204 296 14 0 chr5 132156789 132156860 -67473290 + (TGAA)n Simple_repeat Simple_repeat 3 74 0 42512 50 6 1 chr5 132157779 132163890 -67466260 + L1PA4 LINE L1 4 6144 -11 21 0 0 0 chr5 132163890 132163911 -67466239 + AT_rich Low_complexity Low_complexity 1 21 0 423 0 0 0 chr5 132164044 132164091 -67466059 + (TG)n Simple_repeat Simple_repeat 2 48 0 414 331 148 10 chr5 132164176 132164481 -67465669 - L1ME4a LINE L1 -225 5896 5550 434 331 7 0 chr5 132164551 132164687 -67465463 + MIR SINE MIR 4 140 -122 342 307 44 7 chr5 132164688 132164825 -67465325 - L2 LINE L2 0 3313 3172 212 203 31 62 chr5 132164811 132164875 -67465275 + MIR SINE MIR 143 204 -58 * 331 183 44 44 chr5 132164876 132165056 -67465094 + (TTAA)n Simple_repeat Simple_repeat 1 180 0 6217 216 15 19 chr5 132165059 132166560 -67463590 - L1 LINE L1 -1287 4859 3365 1577 167 21 62 chr5 132166565 132166901 -67463249 + L1PB4 LINE L1 5823 6144 -12 251 271 17 0 chr5 132166914 132166973 -67463177 + MIR SINE MIR 203 262 0 378 43 0 0 chr5 132167254 132167301 -67462849 + MADE1 DNA Mariner 1 47 -33 5715 143 29 18 chr5 132167357 132168329 -67461821 - L1MC1 LINE L1 -18 6315 5329 1642 186 7 17 chr5 132168329 132168625 -67461525 - AluJb SINE Alu -19 293 1 5715 143 29 18 chr5 132168625 132168671 -67461479 - L1MC1 LINE L1 -1004 5329 5285 553 339 47 65 chr5 132169476 132170030 -67460120 - LTR67 LTR ERVL -11 546 3 218 32 32 0 chr5 132170080 132170111 -67460039 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 919 304 79 43 chr5 132170403 132170569 -67459581 - ERVL LTR ERVL -426 5338 5179 2072 132 0 3 chr5 132170569 132170872 -67459278 - AluSx SINE Alu -10 302 1 919 304 79 43 chr5 132170872 132171261 -67458889 - ERVL LTR ERVL -585 5179 4763 371 191 0 11 chr5 132171448 132171537 -67458613 + (TA)n Simple_repeat Simple_repeat 1 88 0 251 287 70 9 chr5 132171559 132171674 -67458476 - ERVL LTR ERVL -1286 4478 4357 21 0 0 0 chr5 132172011 132172032 -67458118 + AT_rich Low_complexity Low_complexity 1 21 0 328 235 83 52 chr5 132172152 132172382 -67457768 - L1M4 LINE L1 -1539 4607 4371 1732 155 3 103 chr5 132172690 132172944 -67457206 - MER7A DNA MER2_type -2692 346 145 1714 166 18 3 chr5 132172944 132173228 -67456922 + AluJb SINE Alu 1 288 -24 1732 155 3 103 chr5 132173228 132173360 -67456790 - MER7A DNA MER2_type -2893 145 1 380 253 32 25 chr5 132173366 132173524 -67456626 - L1MCa LINE L1 -4859 1547 1389 1102 138 58 67 chr5 132173559 132173707 -67456443 - MER7A DNA MER2_type -2817 221 76 2062 104 13 29 chr5 132173707 132174015 -67456135 - AluSx SINE Alu -9 303 1 1102 138 58 67 chr5 132174015 132174091 -67456059 - MER7A DNA MER2_type -2962 76 1 29 28 0 0 chr5 132175251 132175287 -67454863 + AT_rich Low_complexity Low_complexity 1 36 0 439 231 41 7 chr5 132175435 132175582 -67454568 - L1MCa LINE L1 -5116 1293 1142 528 264 67 86 chr5 132175611 132175803 -67454347 - L1MCa LINE L1 -5327 1082 897 2327 104 0 0 chr5 132175803 132176100 -67454050 - AluSg SINE Alu -12 298 2 528 264 67 86 chr5 132176100 132176221 -67453929 - L1MCa LINE L1 -5512 897 775 1456 149 51 14 chr5 132176978 132177253 -67452897 - L1MC1 LINE L1 0 6333 6049 219 69 0 0 chr5 132177403 132177432 -67452718 + (A)n Simple_repeat Simple_repeat 1 29 0 3592 194 35 14 chr5 132177717 132178623 -67451527 - L1MC1 LINE L1 -286 6047 5124 656 244 30 12 chr5 132178615 132178783 -67451367 - L1PA16 LINE L1 -4 6162 5992 * 14713 151 24 34 chr5 132179096 132181999 -67448151 + L1M1 LINE L1 1011 3883 -3682 6795 116 24 25 chr5 132181999 132183177 -67446973 - L1M1 LINE L1 -3892 3673 2498 1775 149 62 56 chr5 132184231 132184553 -67445597 - MER1B DNA MER1_type -1 338 15 253 401 51 14 chr5 132184970 132185324 -67444826 - L2 LINE L2 -900 2414 2048 1481 187 3 3 chr5 132186649 132186959 -67443191 - L1PB1 LINE L1 -1249 4897 4588 * 5942 121 36 3 chr5 132186957 132188172 -67441978 + L1PB1 LINE L1 4898 6151 0 29 0 0 0 chr5 132189035 132189064 -67441086 + AT_rich Low_complexity Low_complexity 1 29 0 304 228 82 70 chr5 132189869 132190027 -67440123 - MIR SINE MIR -6 256 97 198 270 0 0 chr5 132190172 132190246 -67439904 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 1454 233 34 49 chr5 132190315 132191032 -67439118 + L1M4 LINE L1 3841 4525 -1621 420 320 77 57 chr5 132191145 132191623 -67438527 + L1M4 LINE L1 4188 4675 -1471 17147 170 42 8 chr5 132192486 132195555 -67434595 + L1MA2 LINE L1 1 3178 -4387 2405 121 5 5 chr5 132195555 132195927 -67434223 + L1PA10 LINE L1 5795 6166 -2 17147 170 42 8 chr5 132195927 132195943 -67434207 + L1MA2 LINE L1 3178 3192 -4373 7161 156 18 11 chr5 132195929 132196651 -67433499 + L1MA2 LINE L1 5353 6069 -1654 * 237 33 0 0 chr5 132196651 132196681 -67433469 + (CA)n Simple_repeat Simple_repeat 1 30 0 7161 156 18 11 chr5 132196681 132198307 -67431843 + L1MA2 LINE L1 6069 7723 0 417 233 0 0 chr5 132198479 132198552 -67431598 - MER81 DNA DNA 0 114 42 1495 91 48 0 chr5 132199544 132199753 -67430397 - L1PA8 LINE L1 -20 6152 5934 1479 198 10 17 chr5 132199989 132200282 -67429868 + MLT1D LTR MaLR 213 503 -2 1988 112 11 0 chr5 132200810 132201077 -67429073 - AluSc SINE Alu -21 288 19 900 98 15 0 chr5 132201108 132201240 -67428910 + MER85 DNA T2_type 1 134 -5 279 54 0 0 chr5 132201566 132201603 -67428547 + (CA)n Simple_repeat Simple_repeat 2 38 0 1477 208 202 0 chr5 132202332 132202649 -67427501 - MLT1D LTR MaLR -124 381 1 670 248 111 22 chr5 132203958 132204184 -67425966 + MIR SINE MIR 2 247 -15 407 260 160 7 chr5 132204402 132204552 -67425598 - MIR SINE MIR -17 245 73 409 219 0 31 chr5 132204846 132204942 -67425208 + MER5A DNA MER1_type 14 106 -83 523 244 34 0 chr5 132205270 132205389 -67424761 + L2 LINE L2 3191 3313 0 288 0 0 0 chr5 132206409 132206441 -67423709 + (TG)n Simple_repeat Simple_repeat 2 33 0 24 67 0 0 chr5 132206472 132206517 -67423633 + AT_rich Low_complexity Low_complexity 1 45 0 541 322 94 16 chr5 132207488 132208000 -67422150 - L1MC4a LINE L1 -1904 5904 5353 750 279 214 5 chr5 132208051 132208466 -67421684 - HsTC2 DNA Tc2 -1 1897 1396 227 183 33 17 chr5 132208527 132208587 -67421563 - HsTC2 DNA Tc2 -1835 63 3 22 0 0 0 chr5 132208715 132208737 -67421413 + AT_rich Low_complexity Low_complexity 1 22 0 333 299 101 48 chr5 132209298 132209566 -67420584 - L1MC4a LINE L1 -1688 4458 4177 243 0 0 0 chr5 132209759 132209786 -67420364 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 227 232 131 20 chr5 132209906 132210005 -67420145 - L1MC4a LINE L1 -2308 3838 3729 416 286 149 59 chr5 132210005 132210635 -67419515 - L1MC4a LINE L1 -2370 3776 3090 230 298 41 8 chr5 132210642 132210763 -67419387 - L1MC4a LINE L1 -3319 2827 2703 2956 38 16 16 chr5 132211171 132211541 -67418609 - L1PA7 LINE L1 -259 5895 5526 2001 75 0 11 chr5 132211542 132211808 -67418342 + L1PA7 LINE L1 5891 6153 -1 22 0 0 0 chr5 132211858 132211880 -67418270 + AT_rich Low_complexity Low_complexity 1 22 0 16764 42 8 2 chr5 132212751 132215598 -67414552 + L1PA5 LINE L1 3305 6154 0 1053 174 81 39 chr5 132215761 132216019 -67414131 + MER58D DNA MER1_type 1 269 -117 336 304 131 46 chr5 132216042 132216348 -67413802 + L1MC4 LINE L1 6891 7222 -820 628 278 101 46 chr5 132216451 132216887 -67413263 + L1MC5 LINE L1 7472 7931 -30 2436 71 0 3 chr5 132217752 132218062 -67412088 + AluY SINE Alu 1 309 -2 707 284 128 25 chr5 132218066 132218661 -67411489 + L1MCa LINE L1 865 1520 -4906 3047 257 104 61 chr5 132218708 132218951 -67411199 + L1MCa LINE L1 1925 2156 -4270 2386 88 0 19 chr5 132218951 132219268 -67410882 + AluSx SINE Alu 1 311 -1 3047 257 104 61 chr5 132219268 132221629 -67408521 + L1MCa LINE L1 2156 4594 -1832 761 132 151 33 chr5 132221651 132221803 -67408347 - Tigger5 DNA MER2_type 0 2323 2154 666 210 0 0 chr5 132221794 132221913 -67408237 - Tigger5 DNA MER2_type -2204 119 1 * 885 224 99 29 chr5 132221984 132222368 -67407782 + L1MCa LINE L1 4710 5120 -1306 1415 266 132 18 chr5 132222441 132223219 -67406931 + L1M4 LINE L1 4377 5243 -903 326 246 179 20 chr5 132223682 132223877 -67406273 + L1M4 LINE L1 2210 2435 -3711 189 74 0 0 chr5 132225117 132225144 -67405006 + (A)n Simple_repeat Simple_repeat 1 27 0 216 254 0 0 chr5 132225578 132225637 -67404513 + (TA)n Simple_repeat Simple_repeat 1 59 0 1579 219 126 12 chr5 132225638 132226068 -67404082 - MLT2B1 LTR ERVL -41 479 1 801 277 155 95 chr5 132226511 132227564 -67402586 + HAL1 LINE L1 1275 2390 -117 25 31 0 0 chr5 132227602 132227634 -67402516 + AT_rich Low_complexity Low_complexity 1 32 0 450 250 87 35 chr5 132227857 132228029 -67402121 - L2 LINE L2 0 3313 3133 732 351 93 30 chr5 132228054 132228783 -67401367 - ERVL LTR ERVL -576 5188 4414 941 339 74 52 chr5 132229019 132229485 -67400665 - ERVL LTR ERVL -1653 4111 3657 369 302 32 0 chr5 132229485 132229611 -67400539 - MER94 DNA DNA 0 134 5 941 339 74 52 chr5 132229611 132230046 -67400104 - ERVL LTR ERVL -2107 3657 3190 1588 342 52 29 chr5 132230211 132231249 -67398901 - ERVL LTR ERVL -2861 2903 1842 23 33 0 0 chr5 132232233 132232263 -67397887 + AT_rich Low_complexity Low_complexity 1 30 0 2138 242 92 51 chr5 132232274 132233339 -67396811 + L1M3e LINE L1 7 2298 -4739 * 2149 217 80 54 chr5 132233327 132234593 -67395557 + L1 LINE L1 2542 3846 -3719 5887 179 32 16 chr5 132234594 132235895 -67394255 + L1 LINE L1 4957 6278 -1287 2787 74 28 5 chr5 132235933 132236324 -67393826 - L1PA7 LINE L1 -3 6151 5752 300 282 173 9 chr5 132237566 132237676 -67392474 + MER5A DNA MER1_type 61 188 -1 219 257 10 89 chr5 132237679 132237780 -67392370 + L2 LINE L2 2764 2856 -458 185 342 63 0 chr5 132238044 132238123 -67392027 + L2 LINE L2 3228 3311 -2 230 330 97 44 chr5 132238620 132238826 -67391324 - L2 LINE L2 -588 2726 2510 24 32 0 0 chr5 132239495 132239526 -67390624 + AT_rich Low_complexity Low_complexity 1 31 0 280 340 21 0 chr5 132239767 132239864 -67390286 + L1MEc LINE L1 570 668 -6157 13054 200 45 24 chr5 132240331 132242554 -67387596 + L1PA12 LINE L1 2 2176 -4643 1872 170 3 0 chr5 132242554 132242848 -67387302 + AluSx SINE Alu 1 295 -17 13054 200 45 24 chr5 132242848 132245614 -67384536 + L1PA12 LINE L1 2176 6671 -148 5497 128 24 1 chr5 132245617 132247417 -67382733 + L1PA13 LINE L1 4330 6148 -15 2144 219 63 21 chr5 132247683 132248435 -67381715 - MER21B LTR ERV1 -5 858 1 328 222 35 118 chr5 132248514 132248717 -67381433 + L1MEc LINE L1 1110 1427 -5207 2114 228 150 29 chr5 132248835 132249338 -67380812 + MER50 LTR ERV1 1 603 -131 7551 33 0 1 chr5 132249338 132250241 -67379909 + L1PA3 LINE L1 5254 6155 0 2114 228 150 29 chr5 132250241 132250392 -67379758 + MER50 LTR ERV1 603 734 0 448 354 48 0 chr5 132250394 132250600 -67379550 + L1MEc LINE L1 168 383 -6013 1141 227 101 30 chr5 132250638 132251044 -67379106 + L1ME2 LINE L1 5664 6098 -66 1728 212 137 19 chr5 132251173 132251810 -67378340 + L1MA8 LINE L1 2895 3606 -3959 723 190 55 13 chr5 132251797 132252112 -67378038 + L1MA8 LINE L1 5907 6363 -1202 * 30127 101 12 14 chr5 132252101 132254079 -67376071 + L1PA7 LINE L1 714 2693 -3776 2312 93 0 17 chr5 132254079 132254381 -67375769 + AluY SINE Alu 1 297 -14 30127 101 12 14 chr5 132254381 132258144 -67372006 + L1PA7 LINE L1 2693 6464 -5 2543 221 56 48 chr5 132258140 132258979 -67371171 + L1ME1 LINE L1 5314 6159 -7 * 5361 135 33 15 chr5 132258986 132259968 -67370182 + L1MA8 LINE L1 6707 7710 0 238 352 96 16 chr5 132260808 132260933 -67369217 + L2 LINE L2 3171 3305 -8 225 0 0 0 chr5 132261894 132261919 -67368231 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 180 364 100 0 chr5 132263486 132263626 -67366524 - MIR SINE MIR -61 201 48 382 202 56 0 chr5 132264045 132264134 -67366016 - MLT1E1 LTR MaLR -535 119 26 1278 162 118 25 chr5 132264138 132264453 -67365697 + L1MD3 LINE L1 7652 7995 0 777 295 20 12 chr5 132264757 132265001 -67365149 + L1ME3A LINE L1 5526 5771 -399 481 279 64 55 chr5 132265011 132265053 -67365097 + L1ME3A LINE L1 5928 5968 -202 5089 52 3 0 chr5 132265053 132265683 -67364467 + L1PA5 LINE L1 5520 6151 -3 481 279 64 55 chr5 132265683 132265859 -67364291 + L1ME3A LINE L1 5968 6148 -22 264 284 25 25 chr5 132266012 132266093 -67364057 + L2 LINE L2 3233 3313 0 233 323 144 24 chr5 132266314 132266481 -67363669 + L3b LINE CR1 1323 1509 -74 24 0 0 0 chr5 132267360 132267384 -67362766 + AT_rich Low_complexity Low_complexity 1 24 0 6084 93 23 11 chr5 132267640 132269166 -67360984 - L1PA10 LINE L1 0 6168 4615 1511 223 82 32 chr5 132269230 132269642 -67360508 - MSTB2 LTR MaLR -2 455 23 463 261 9 0 chr5 132269994 132270105 -67360045 + MIR3 SINE MIR 96 207 -1 202 231 39 19 chr5 132270253 132270305 -67359845 - L2 LINE L2 -7 3306 3254 413 281 140 18 chr5 132271865 132272029 -67358121 + MER5A DNA MER1_type 1 184 -5 387 233 69 26 chr5 132272590 132272706 -67357444 + L2 LINE L2 3186 3306 -7 309 271 118 65 chr5 132272833 132273062 -67357088 - L1ME LINE L1 -474 5647 5407 1775 190 0 0 chr5 132273828 132274118 -67356032 + AluSx SINE Alu 3 292 -20 3328 156 50 10 chr5 132274210 132275213 -67354937 + L1MA8 LINE L1 4866 5900 -391 226 175 100 0 chr5 132275661 132275701 -67354449 + L2 LINE L2 3189 3232 -81 245 240 33 83 chr5 132276434 132276555 -67353595 - MIR SINE MIR -39 223 109 194 235 29 44 chr5 132276738 132276806 -67353344 + MER5B DNA MER1_type 110 176 -2 552 270 29 11 chr5 132277074 132277248 -67352902 + MER5B DNA MER1_type 2 178 0 265 333 204 7 chr5 132277297 132277444 -67352706 - MER5A DNA MER1_type 0 189 14 763 220 11 23 chr5 132277466 132277643 -67352507 - MER5B DNA MER1_type -3 175 1 2067 125 34 0 chr5 132277673 132277970 -67352180 + AluSx SINE Alu 1 307 -5 2072 96 0 0 chr5 132277972 132278243 -67351907 + AluY SINE Alu 3 273 -38 334 38 19 19 chr5 132278243 132278296 -67351854 + (GGAA)n Simple_repeat Simple_repeat 3 55 0 536 318 19 9 chr5 132278397 132278611 -67351539 + MER102a DNA MER1_type 115 330 0 287 256 0 13 chr5 132278903 132278981 -67351169 + MIR SINE MIR 174 250 -12 29 70 0 0 chr5 132279990 132280047 -67350103 + AT_rich Low_complexity Low_complexity 1 57 0 1588 229 101 7 chr5 132280540 132280954 -67349196 + LTR40c LTR ERVL 1 453 -12 321 317 226 39 chr5 132281706 132281914 -67348236 + MIR SINE MIR 3 249 -13 288 273 26 0 chr5 132281973 132282050 -67348100 - MIR3 SINE MIR -8 200 122 228 200 17 33 chr5 132282228 132282257 -67347893 + (TATG)n Simple_repeat Simple_repeat 3 31 -30 1573 158 29 111 chr5 132282257 132282636 -67347514 + MER7A DNA MER2_type 1 346 0 228 200 17 33 chr5 132282636 132282666 -67347484 + (TATG)n Simple_repeat Simple_repeat 31 61 0 903 293 58 58 chr5 132283940 132284061 -67346089 - L2 LINE L2 -3 3310 3190 2115 130 0 13 chr5 132284061 132284376 -67345774 + AluSx SINE Alu 1 311 -1 903 293 58 58 chr5 132284376 132284738 -67345412 - L2 LINE L2 -122 3191 2827 1202 284 100 30 chr5 132284741 132285249 -67344901 + MLT1H1 LTR MaLR 9 552 -3 504 251 168 5 chr5 132285364 132285557 -67344593 - MLT1H1 LTR MaLR -218 331 76 1706 152 50 39 chr5 132285618 132285979 -67344171 + MLT1A1 LTR MaLR 1 365 0 1139 215 76 55 chr5 132286035 132286416 -67343734 + MLT2C1 LTR ERVL 7 395 -2 297 276 60 75 chr5 132287339 132287538 -67342612 + HAL1 LINE L1 2250 2445 -62 2639 203 33 33 chr5 132287794 132288405 -67341745 - MLT1E3 LTR MaLR -1 623 13 675 164 181 6 chr5 132288511 132288642 -67341508 - L1MA9 LINE L1 0 6312 6143 333 0 0 0 chr5 132288642 132288679 -67341471 + (TG)n Simple_repeat Simple_repeat 1 37 0 675 164 181 6 chr5 132288679 132288718 -67341432 - L1MA9 LINE L1 -169 6143 6112 326 276 200 0 chr5 132289276 132289381 -67340769 + MIR SINE MIR 19 144 -64 209 167 0 62 chr5 132289377 132289425 -67340725 - MIR3 SINE MIR -5 203 159 * 216 329 29 0 chr5 132289975 132290045 -67340105 + L2 LINE L2 3195 3266 -6 5330 45 0 5 chr5 132290293 132290964 -67339186 - L1P LINE L1 -1065 5081 4414 827 248 19 0 chr5 132292161 132292371 -67337779 - MLT1H1 LTR MaLR 0 555 342 500 250 30 56 chr5 132292396 132292664 -67337486 + L1P LINE L1 4737 4997 -1149 247 290 0 0 chr5 132293740 132293802 -67336348 + MER94 DNA DNA 1 62 -72 1364 214 69 40 chr5 132294173 132294577 -67335573 + MER114 LTR ERV 36 458 -190 2336 96 0 0 chr5 132294577 132294879 -67335271 - AluSc SINE Alu -7 302 1 1364 214 69 40 chr5 132294879 132294969 -67335181 + MER114 LTR ERV 458 544 -104 22 0 0 0 chr5 132295482 132295504 -67334646 + AT_rich Low_complexity Low_complexity 1 22 0 321 274 20 0 chr5 132296910 132297012 -67333138 - LTR16A LTR ERVL -107 343 240 302 319 9 18 chr5 132297033 132297146 -67333004 - MERVL LTR ERVL -2562 2923 2812 590 259 81 22 chr5 132297234 132297435 -67332715 - MLT1J LTR MaLR -279 188 1 311 230 40 20 chr5 132297435 132297535 -67332615 + HAL1b LINE L1 699 800 -548 776 155 0 0 chr5 132297609 132297725 -67332425 + FLAM_C SINE Alu 1 116 -17 1399 58 0 0 chr5 132297779 132297952 -67332198 - L1PA7 LINE L1 -5 6149 5977 798 309 67 33 chr5 132299228 132299587 -67330563 + L2 LINE L2 2943 3313 0 23 33 0 0 chr5 132299856 132299886 -67330264 + AT_rich Low_complexity Low_complexity 1 30 0 270 296 176 52 chr5 132300828 132301425 -67328725 + L2 LINE L2 1593 2263 -1051 1944 269 126 34 chr5 132301448 132301796 -67328354 + L2 LINE L2 2078 2393 -921 1720 186 23 3 chr5 132301796 132302102 -67328048 - AluJb SINE Alu 0 312 1 1944 269 126 34 chr5 132302102 132302516 -67327634 + L2 LINE L2 2393 2910 -404 751 312 58 53 chr5 132302485 132302899 -67327251 + L2 LINE L2 2818 3233 -80 * 22 0 0 0 chr5 132303073 132303095 -67327055 + AT_rich Low_complexity Low_complexity 1 22 0 237 180 0 0 chr5 132303121 132303171 -67326979 + (TA)n Simple_repeat Simple_repeat 1 50 0 235 341 123 29 chr5 132303285 132303423 -67326727 + L2 LINE L2 2603 2753 -561 6214 86 10 14 chr5 132304232 132305493 -67324657 - L1PA10 LINE L1 -11 6157 4889 388 254 171 28 chr5 132305579 132305796 -67324354 - MARNA DNA Mariner -155 431 184 21 36 0 0 chr5 132308929 132308957 -67321193 + AT_rich Low_complexity Low_complexity 1 28 0 2245 105 3 0 chr5 132309316 132309622 -67320528 + AluSq SINE Alu 1 307 -6 342 0 0 0 chr5 132310829 132310867 -67319283 + (TG)n Simple_repeat Simple_repeat 2 39 0 552 261 99 21 chr5 132310880 132311289 -67318861 - MLT1D LTR MaLR -6 488 1 1196 202 4 25 chr5 132313128 132313371 -67316779 + MER8 DNA MER2_type 2 239 0 384 282 17 34 chr5 132313710 132313827 -67316323 + MIR SINE MIR 1 115 -147 870 162 0 0 chr5 132314012 132314148 -67316002 - MER20 DNA MER1_type -7 212 77 368 235 37 0 chr5 132314183 132314264 -67315886 - MER20 DNA MER1_type -135 84 1 22 0 0 0 chr5 132315122 132315144 -67315006 + AT_rich Low_complexity Low_complexity 1 22 0 3561 210 44 20 chr5 132315332 132316886 -67313264 + L1MB8 LINE L1 4342 5933 -245 355 355 82 4 chr5 132316931 132317199 -67312951 + L2 LINE L2 3012 3300 -13 1145 135 39 0 chr5 132317305 132317513 -67312637 - L1MA8 LINE L1 -10 6281 6066 231 339 183 17 chr5 132317519 132317699 -67312451 - MIR SINE MIR -52 210 1 721 191 22 7 chr5 132317986 132318122 -67312028 - MLT1A1 LTR MaLR -209 156 19 857 245 14 23 chr5 132319109 132319325 -67310825 + MLT1J LTR MaLR 1 214 -297 417 237 111 82 chr5 132319414 132319621 -67310529 + MLT1J LTR MaLR 265 477 -34 816 266 44 24 chr5 132319818 132320066 -67310084 + MIR SINE MIR 2 254 -8 186 375 115 0 chr5 132320084 132320188 -67309962 - L2 LINE L2 -8 3264 3149 1992 145 0 0 chr5 132320287 132320594 -67309556 - AluSx SINE Alu 0 307 1 466 264 95 54 chr5 132321520 132321762 -67308388 + MER112 DNA MER1_type 1 252 -4 416 225 0 0 chr5 132323883 132323963 -67306187 - Tigger3(Golem) DNA MER2_type -1 3028 2949 923 188 13 0 chr5 132324117 132324266 -67305884 + FRAM SINE Alu 1 146 -30 385 356 88 42 chr5 132324777 132325061 -67305089 + L2 LINE L2 2976 3272 0 3128 113 55 10 chr5 132325362 132325851 -67304299 - MER9 LTR ERVK 0 511 1 815 149 15 30 chr5 132325900 132326034 -67304116 + FLAM_C SINE Alu 2 133 0 3504 94 6 14 chr5 132326121 132326612 -67303538 + LTR15 LTR ERV1 1 487 -6 2285 118 0 0 chr5 132326670 132326975 -67303175 + AluSx SINE Alu 3 307 -5 215 309 64 0 chr5 132327415 132327509 -67302641 - MIR SINE MIR -61 201 102 2652 276 38 23 chr5 132328062 132328898 -67301252 + L1MEc LINE L1 34 887 -5509 1656 181 0 26 chr5 132328898 132329201 -67300949 + AluJo SINE Alu 5 299 -13 2652 276 38 23 chr5 132329201 132329325 -67300825 + L1MEc LINE L1 887 1008 -5388 1908 240 96 64 chr5 132329345 132330167 -67299983 + L1MEc LINE L1 2407 3267 -2948 1394 177 98 11 chr5 132330167 132330444 -67299706 - AluJo SINE Alu 0 302 2 1908 240 96 64 chr5 132330444 132330596 -67299554 + L1MEc LINE L1 3267 3413 -2802 615 177 0 62 chr5 132330596 132330726 -67299424 - MLT1D LTR MaLR 0 505 384 265 71 24 0 chr5 132330726 132330768 -67299382 - L1PA6 LINE L1 -6 6148 6106 37088 74 5 2 chr5 132330813 132336544 -67293606 - L1PA6 LINE L1 -43 6111 366 206 211 0 0 chr5 132338898 132338936 -67291214 + CT-rich Low_complexity Low_complexity 3 40 0 214 147 0 0 chr5 132339465 132339499 -67290651 + (CGGGG)n Simple_repeat Simple_repeat 1 34 0 2391 68 0 0 chr5 132341791 132342098 -67288052 - L1PA5 LINE L1 -4 6150 5844 4653 185 36 2 chr5 132342289 132343168 -67286982 - Tigger7 DNA MER2_type -1578 909 1 1137 211 0 0 chr5 132343751 132343960 -67286190 - Tigger7 DNA MER2_type -2187 300 92 21 0 0 0 chr5 132345106 132345127 -67285023 + AT_rich Low_complexity Low_complexity 1 21 0 242 189 0 0 chr5 132345568 132345605 -67284545 + L2 LINE L2 3201 3237 -35 638 187 7 50 chr5 132345860 132345999 -67284151 - FLAM_A SINE Alu 0 133 1 1950 201 66 29 chr5 132346363 132346850 -67283300 + MLT1D LTR MaLR 1 505 0 904 173 45 22 chr5 132347800 132347979 -67282171 + MER5A DNA MER1_type 7 189 0 27 62 0 0 chr5 132349010 132349058 -67281092 + AT_rich Low_complexity Low_complexity 1 48 0 296 355 87 20 chr5 132349391 132349690 -67280460 + L2 LINE L2 1756 2074 -1240 311 218 7 150 chr5 132351270 132351417 -67278733 - L1MEc LINE L1 -4118 2445 2320 246 209 58 12 chr5 132351502 132351588 -67278562 - L1MEc LINE L1 -5030 1354 1265 298 300 76 50 chr5 132351700 132352163 -67277987 + L1ME3A LINE L1 4742 5216 -930 31 44 0 0 chr5 132352826 132352871 -67277279 + AT_rich Low_complexity Low_complexity 1 45 0 239 298 175 9 chr5 132353011 132353125 -67277025 + MIR SINE MIR 8 140 -122 249 341 55 0 chr5 132353513 132353604 -67276546 - MER5A DNA MER1_type -84 105 10 429 20 0 0 chr5 132354461 132354511 -67275639 + (TG)n Simple_repeat Simple_repeat 2 51 0 521 256 22 0 chr5 132354737 132354874 -67275276 + MLT1I LTR MaLR 3 142 -267 2064 173 45 17 chr5 132354878 132355300 -67274850 + Tigger2a DNA MER2_type 1 434 0 287 244 24 12 chr5 132355373 132355455 -67274695 + MLT1I LTR MaLR 309 391 -18 672 306 48 22 chr5 132356236 132356743 -67273407 + L1ME3A LINE L1 5352 5873 -297 25 31 0 0 chr5 132356781 132356813 -67273337 + AT_rich Low_complexity Low_complexity 1 32 0 235 289 29 10 chr5 132357120 132357224 -67272926 - L1ME LINE L1 -248 5873 5768 300 329 155 5 chr5 132357303 132357510 -67272640 - MIR SINE MIR 0 262 25 290 311 68 20 chr5 132357601 132357749 -67272401 + MLT1J2 LTR MaLR 3 157 -293 198 0 0 0 chr5 132358011 132358033 -67272117 + (A)n Simple_repeat Simple_repeat 1 22 0 376 290 76 14 chr5 132358415 132358560 -67271590 + MIR SINE MIR 48 201 -61 1510 221 96 48 chr5 132358569 132359049 -67271101 + MLT1D LTR MaLR 3 505 0 345 306 43 93 chr5 132359509 132359767 -67270383 + MIR SINE MIR 4 248 -14 369 332 15 25 chr5 132360526 132360722 -67269428 + MLT1L LTR MaLR 201 394 -221 3590 137 57 37 chr5 132360962 132360990 -67269160 + Tigger2 DNA MER2_type 1 27 -2691 1932 61 140 47 chr5 132360990 132361269 -67268881 + AluSq SINE Alu 1 305 -8 3590 137 57 37 chr5 132361269 132361683 -67268467 + Tigger2 DNA MER2_type 27 466 -2252 2211 106 13 7 chr5 132361683 132361984 -67268166 + AluSx SINE Alu 1 303 -9 3590 137 57 37 chr5 132361984 132362275 -67267875 + Tigger2 DNA MER2_type 466 750 -1968 1092 157 14 96 chr5 132362327 132362608 -67267542 + Tigger2 DNA MER2_type 2461 2718 0 978 302 204 38 chr5 132362710 132363749 -67266401 - L2 LINE L2 -1 3312 2062 1174 188 0 54 chr5 132363750 132363989 -67266161 + AluJo SINE Alu 5 230 -82 468 0 0 0 chr5 132363989 132364041 -67266109 + (A)n Simple_repeat Simple_repeat 1 52 0 451 291 183 51 chr5 132364041 132364567 -67265583 - L2 LINE L2 -1209 2105 1511 2391 61 10 3 chr5 132365260 132365554 -67264596 + AluY SINE Alu 1 296 -15 1858 296 120 66 chr5 132365563 132365815 -67264335 + L2 LINE L2 1462 1699 -1573 1019 175 0 0 chr5 132365815 132365969 -67264181 + FRAM SINE Alu 1 154 -12 1858 296 120 66 chr5 132365969 132366806 -67263344 + L2 LINE L2 1699 2667 -605 1147 178 24 0 chr5 132366806 132367019 -67263131 - MER20 DNA MER1_type 0 219 2 1858 296 120 66 chr5 132367019 132367602 -67262548 + L2 LINE L2 2667 3217 -55 631 250 309 16 chr5 132368266 132368638 -67261512 - L2 LINE L2 -9 3304 2824 724 189 10 95 chr5 132368674 132368873 -67261277 - L1ME2 LINE L1 -73 6097 5910 2270 110 0 0 chr5 132368873 132369165 -67260985 - AluSc SINE Alu -17 292 1 724 189 10 95 chr5 132369165 132369192 -67260958 - L1ME2 LINE L1 -260 5910 5882 626 216 69 101 chr5 132369218 132369593 -67260557 - L1ME2 LINE L1 -541 5623 5261 545 314 49 28 chr5 132369636 132370228 -67259922 - HERV16 LTR ERVL -1654 4000 3390 * 1269 315 17 32 chr5 132370225 132370920 -67259230 - HERV16 LTR ERVL -1905 3091 2612 1874 297 83 1 chr5 132370944 132371607 -67258543 - HERV16 LTR ERVL -3942 1054 338 322 284 0 0 chr5 132371903 132371977 -67258173 - LTR16A LTR ERVL 0 450 377 632 273 55 66 chr5 132371984 132372424 -67257726 - L1ME LINE L1 -4981 1089 691 1358 277 129 59 chr5 132372426 132373188 -67256962 - L2 LINE L2 -566 2748 1934 943 189 18 40 chr5 132374184 132374406 -67255744 + MER20 DNA MER1_type 3 219 0 303 301 48 103 chr5 132375300 132375612 -67254538 - L1M2 LINE L1 -5490 1359 1065 208 206 0 0 chr5 132375782 132375816 -67254334 + C-rich Low_complexity Low_complexity 5 38 0 1344 114 57 11 chr5 132376730 132376992 -67253158 - L1MA4 LINE L1 -1 6299 6026 23 33 0 0 chr5 132377848 132377878 -67252272 + AT_rich Low_complexity Low_complexity 1 30 0 180 219 0 0 chr5 132378044 132378085 -67252065 + (TA)n Simple_repeat Simple_repeat 1 41 0 424 313 69 7 chr5 132380477 132380621 -67249529 - MIR SINE MIR -62 200 48 354 276 0 16 chr5 132381069 132381192 -67248958 + (TATATG)n Simple_repeat Simple_repeat 6 126 0 526 150 20 0 chr5 132381585 132381685 -67248465 - L1MC3 LINE L1 -6 7779 7678 919 134 134 168 chr5 132381685 132381879 -67248271 - AluJb SINE Alu 0 311 130 2034 139 3 0 chr5 132381879 132382167 -67247983 + AluSx SINE Alu 1 289 -23 919 134 134 168 chr5 132382167 132382293 -67247857 - AluJb SINE Alu -181 130 1 2455 186 48 7 chr5 132382296 132382838 -67247312 - L1MC3 LINE L1 -96 7689 7126 505 291 48 52 chr5 132385254 132385543 -67244607 - L1ME4a LINE L1 -233 5888 5601 360 303 45 13 chr5 132386166 132386321 -67243829 - MIR SINE MIR -5 257 98 338 358 44 0 chr5 132387396 132387533 -67242617 - MIR3 SINE MIR -50 158 16 206 151 19 38 chr5 132388164 132388217 -67241933 + A-rich Low_complexity Low_complexity 2 53 0 985 109 17 23 chr5 132388225 132388400 -67241750 - MER2 DNA MER2_type -143 202 29 2135 121 0 10 chr5 132389172 132389477 -67240673 - AluSx SINE Alu -10 302 1 740 264 35 0 chr5 132389895 132390096 -67240054 + MIR SINE MIR 49 256 -6 198 71 0 0 chr5 132391934 132391962 -67238188 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 266 365 0 9 chr5 132392358 132392465 -67237685 + CT-rich Low_complexity Low_complexity 3 108 0 22 0 0 0 chr5 132393898 132393920 -67236230 + AT_rich Low_complexity Low_complexity 1 22 0 5076 90 3 81 chr5 132394595 132395771 -67234379 + L1PA4 LINE L1 5053 6152 -3 1160 276 41 11 chr5 132396409 132396869 -67233281 + L1MC5 LINE L1 5524 5997 -1811 368 241 61 121 chr5 132397218 132397723 -67232427 + L1MC5 LINE L1 7190 7501 -476 275 259 34 54 chr5 132397790 132397937 -67232213 + L1MC4 LINE L1 7736 7879 -163 21 0 0 0 chr5 132398886 132398907 -67231243 + AT_rich Low_complexity Low_complexity 1 21 0 37098 76 8 7 chr5 132398975 132405110 -67225040 - L1PA5 LINE L1 -3 6151 11 386 319 74 37 chr5 132405887 132406103 -67224047 + MIR SINE MIR 14 237 -25 1666 156 35 50 chr5 132406222 132406275 -67223875 - MER7A DNA MER2_type -2692 346 294 2109 134 16 0 chr5 132406275 132406581 -67223569 + AluSx SINE Alu 1 311 -1 1666 156 35 50 chr5 132406581 132406866 -67223284 - MER7A DNA MER2_type -2744 294 15 222 281 49 37 chr5 132406882 132406964 -67223186 - MIR3 SINE MIR -124 84 2 2109 104 3 17 chr5 132407433 132407748 -67222402 + AluSq SINE Alu 1 311 0 293 299 159 0 chr5 132408384 132408491 -67221659 - L2 LINE L2 0 3313 3190 342 289 22 22 chr5 132408623 132408758 -67221392 + GA-rich Low_complexity Low_complexity 5 139 0 255 261 77 60 chr5 132408774 132408912 -67221238 + MIR SINE MIR 31 175 -62 268 297 55 55 chr5 132409455 132409625 -67220525 + MIR SINE MIR 5 181 -80 1303 156 27 18 chr5 132409995 132410220 -67219930 + MER7A DNA MER2_type 29 253 -93 189 0 0 0 chr5 132411363 132411384 -67218766 + (CAT)n Simple_repeat Simple_repeat 3 23 0 627 306 73 9 chr5 132411425 132411644 -67218506 - MIR SINE MIR -9 253 21 2299 108 0 3 chr5 132412392 132412697 -67217453 + AluSx SINE Alu 1 304 -8 2269 119 0 0 chr5 132413007 132413318 -67216832 - AluSx SINE Alu -1 311 1 2421 81 0 7 chr5 132414494 132414802 -67215348 - AluSq SINE Alu -7 306 1 853 219 50 10 chr5 132414940 132415141 -67215009 - MLT1C LTR MaLR 0 467 259 26 30 0 0 chr5 132415355 132415388 -67214762 + AT_rich Low_complexity Low_complexity 1 33 0 400 195 9 80 chr5 132415724 132415837 -67214313 - L1PB4 LINE L1 -72 6084 5980 296 323 25 57 chr5 132416791 132416949 -67213201 + MIR3 SINE MIR 16 168 -40 1567 188 13 16 chr5 132417236 132417539 -67212611 + AluJo SINE Alu 1 302 -10 1447 270 120 86 chr5 132417959 132419513 -67210637 + HAL1 LINE L1 111 1716 -791 227 143 41 0 chr5 132419733 132419782 -67210368 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 25 51 0 0 chr5 132420073 132420112 -67210038 + AT_rich Low_complexity Low_complexity 1 39 0 795 246 72 61 chr5 132420166 132420512 -67209638 - MLT1H LTR MaLR -199 350 1 2495 74 0 0 chr5 132420850 132421148 -67209002 + AluY SINE Alu 1 298 -13 5597 105 1 5 chr5 132421767 132422550 -67207600 - LTR17 LTR ERV1 0 780 1 43 35 0 0 chr5 132423204 132423261 -67206889 + AT_rich Low_complexity Low_complexity 1 57 0 182 133 0 0 chr5 132424144 132424174 -67205976 + L2 LINE L2 3243 3272 0 332 384 18 6 chr5 132424247 132424411 -67205739 - L1ME LINE L1 -473 5648 5483 22 0 0 0 chr5 132425011 132425033 -67205117 + AT_rich Low_complexity Low_complexity 1 22 0 937 119 16 0 chr5 132425038 132425164 -67204986 + AluSp SINE Alu 5 132 -181 1465 87 15 0 chr5 132425190 132425385 -67204765 + AluSg/x SINE Alu 95 292 -20 29 0 0 0 chr5 132425385 132425414 -67204736 + AT_rich Low_complexity Low_complexity 1 29 0 186 103 0 0 chr5 132426522 132426551 -67203599 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 438 292 67 67 chr5 132426551 132426944 -67203206 - L2 LINE L2 -44 3269 2874 676 288 107 19 chr5 132427049 132427320 -67202830 - L2 LINE L2 -752 2562 2268 22 0 0 0 chr5 132428482 132428504 -67201646 + AT_rich Low_complexity Low_complexity 1 22 0 1495 186 0 50 chr5 132429214 132429515 -67200635 + AluJo SINE Alu 9 294 -18 30 45 0 0 chr5 132429706 132429750 -67200400 + AT_rich Low_complexity Low_complexity 1 44 0 194 361 0 0 chr5 132430140 132430201 -67199949 + MIR SINE MIR 45 105 -103 265 301 177 38 chr5 132430218 132430404 -67199746 + MIR SINE MIR 31 242 -20 607 320 84 10 chr5 132430559 132430856 -67199294 + L2 LINE L2 2069 2387 -927 205 229 325 38 chr5 132430839 132430996 -67199154 + L2 LINE L2 2855 3056 -257 * 929 251 116 19 chr5 132431014 132431393 -67198757 - LTR52 LTR ERVL -3 418 3 434 235 139 53 chr5 132431421 132431608 -67198542 + L2 LINE L2 3101 3303 -10 399 239 0 0 chr5 132433642 132433772 -67196378 + CT-rich Low_complexity Low_complexity 4 133 0 446 243 7 96 chr5 132433783 132433919 -67196231 - L2 LINE L2 -1 3312 3189 297 244 47 12 chr5 132433955 132434041 -67196109 + MIR SINE MIR 112 200 -62 1484 150 26 19 chr5 132434456 132434722 -67195428 - MER101 LTR ERV1 -8 466 199 851 147 16 0 chr5 132434769 132434898 -67195252 + AluJo SINE Alu 7 137 -175 1895 164 7 0 chr5 132434901 132435200 -67194950 + AluJb SINE Alu 6 306 -6 916 160 0 13 chr5 132435207 132435363 -67194787 - MER101 LTR ERV1 -314 160 7 386 315 0 11 chr5 132435521 132435702 -67194448 + CT-rich Low_complexity Low_complexity 1 179 0 805 242 0 75 chr5 132436668 132436817 -67193333 - MER58A DNA MER1_type -2197 223 97 2469 63 0 0 chr5 132436817 132437120 -67193030 - AluY SINE Alu -8 303 1 805 242 0 75 chr5 132437120 132437210 -67192940 - MER58A DNA MER1_type -2323 97 2 2357 66 0 38 chr5 132437280 132437598 -67192552 - AluY SINE Alu -5 306 1 416 35 17 0 chr5 132437655 132437713 -67192437 + (TG)n Simple_repeat Simple_repeat 1 59 0 2315 81 0 0 chr5 132438391 132438674 -67191476 + AluSg1 SINE Alu 20 302 -7 21 36 0 0 chr5 132439260 132439288 -67190862 + AT_rich Low_complexity Low_complexity 1 28 0 2042 116 34 0 chr5 132440074 132440368 -67189782 - AluSq SINE Alu -9 304 1 485 274 146 52 chr5 132440386 132440865 -67189285 - HAL1 LINE L1 -10 2497 1974 243 61 0 0 chr5 132440880 132440913 -67189237 + (TG)n Simple_repeat Simple_repeat 2 34 0 1972 111 0 7 chr5 132440913 132441184 -67188966 - AluSx SINE Alu -42 270 2 604 255 20 35 chr5 132441277 132441477 -67188673 - L1ME3A LINE L1 -166 6073 5877 1700 220 42 25 chr5 132441526 132441957 -67188193 + MLT1E2 LTR MaLR 11 448 -178 1090 229 16 8 chr5 132441954 132442207 -67187943 + MLT1E2 LTR MaLR 370 624 -2 * 1146 267 40 38 chr5 132442213 132442685 -67187465 - L1ME3A LINE L1 -369 5870 5398 283 273 28 89 chr5 132442746 132442988 -67187162 - LTR40c LTR ERVL -76 389 204 386 226 123 0 chr5 132443064 132443170 -67186980 - LTR40a LTR ERVL -319 200 82 421 259 20 0 chr5 132443171 132443318 -67186832 + (TA)n Simple_repeat Simple_repeat 2 151 0 2130 266 50 43 chr5 132443325 132445019 -67185131 - L1MEc LINE L1 -3154 3061 1230 573 283 100 41 chr5 132445094 132445384 -67184766 - HAL1 LINE L1 -1674 833 527 794 215 120 26 chr5 132445392 132445664 -67184486 - MER65B LTR ERV1 -2 481 230 285 255 57 28 chr5 132445693 132445799 -67184351 - MER65C LTR ERV1 -352 109 1 225 356 44 0 chr5 132445840 132445975 -67184175 - HAL1 LINE L1 -2044 463 323 341 325 86 12 chr5 132446026 132446189 -67183961 - HAL1 LINE L1 -2281 226 52 269 284 159 51 chr5 132446586 132446762 -67183388 - MIR SINE MIR -23 239 45 2352 86 0 13 chr5 132447324 132447627 -67182523 + AluY SINE Alu 6 304 -7 247 222 136 76 chr5 132448036 132448234 -67181916 + L1MEc LINE L1 1447 1656 -4740 1082 273 172 22 chr5 132448307 132449185 -67180965 + L1MEc LINE L1 2707 3716 -2499 308 363 88 30 chr5 132450924 132451356 -67178794 + HAL1 LINE L1 1078 1534 -973 597 248 101 69 chr5 132451357 132451764 -67178386 + HAL1b LINE L1 478 897 -451 21 0 0 0 chr5 132451794 132451815 -67178335 + AT_rich Low_complexity Low_complexity 1 21 0 1159 253 124 71 chr5 132451964 132452497 -67177653 - MER77 LTR ERV1 -4 601 41 268 330 32 0 chr5 132452529 132452623 -67177527 + MIR SINE MIR 55 151 -57 183 129 0 0 chr5 132452807 132452838 -67177312 + (CATATA)n Simple_repeat Simple_repeat 3 33 0 403 230 40 54 chr5 132453413 132453561 -67176589 + MIR SINE MIR 111 256 -6 786 236 0 0 chr5 132453887 132454052 -67176098 + AluSg/x SINE Alu 135 299 -11 23 0 0 0 chr5 132454652 132454675 -67175475 + AT_rich Low_complexity Low_complexity 1 23 0 1169 210 123 13 chr5 132454974 132455284 -67174866 + MER2 DNA MER2_type 1 344 0 388 351 48 12 chr5 132455564 132455729 -67174421 + MIR SINE MIR 34 204 -58 695 293 57 45 chr5 132456612 132456858 -67173292 + MIR SINE MIR 3 251 -11 521 66 44 0 chr5 132456863 132456954 -67173196 + (ATG)n Simple_repeat Simple_repeat 1 95 0 1583 169 11 7 chr5 132457062 132457334 -67172816 + AluJb SINE Alu 1 273 -39 21 57 0 0 chr5 132459041 132459076 -67171074 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 132459289 132459317 -67170833 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 132460048 132460072 -67170078 + AT_rich Low_complexity Low_complexity 1 24 0 1171 234 106 6 chr5 132461868 132462197 -67167953 - L1MD2 LINE L1 -17 6342 5981 231 299 103 28 chr5 132462372 132462479 -67167671 + L2 LINE L2 3199 3313 0 623 280 84 31 chr5 132462614 132463028 -67167122 + L1ME4a LINE L1 5475 5910 -211 1881 225 100 18 chr5 132463316 132463827 -67166323 - MER119 DNA MER1_type 0 583 31 21 89 0 0 chr5 132464802 132464858 -67165292 + AT_rich Low_complexity Low_complexity 1 56 0 11664 85 14 1 chr5 132464909 132466543 -67163607 - L1PA7 LINE L1 -1402 4744 3085 6748 62 7 0 chr5 132466543 132467963 -67162187 + L1PA7 LINE L1 4731 6151 -3 11664 85 14 1 chr5 132467963 132467990 -67162160 - L1P LINE L1 -3061 3085 3060 1062 201 107 8 chr5 132469138 132469401 -67160749 + AluJo SINE Alu 1 289 -13 292 298 112 41 chr5 132469863 132470341 -67159809 + L1ME4a LINE L1 5505 6016 -105 456 161 2 0 chr5 132470511 132470593 -67159557 + MLT1A2 LTR MaLR 299 374 0 1114 277 58 23 chr5 132470593 132471168 -67158982 + L1M4c LINE L1 1377 2121 -4442 1575 181 51 0 chr5 132471419 132471712 -67158438 - AluSx SINE Alu -4 308 1 379 298 13 10 chr5 132472992 132473125 -67157025 + MER5A DNA MER1_type 2 145 -44 258 350 67 88 chr5 132473129 132473315 -67156835 + L2 LINE L2 185 362 -2952 2091 120 0 40 chr5 132473315 132473641 -67156509 + AluSq SINE Alu 1 313 0 258 350 67 88 chr5 132473641 132473785 -67156365 + L2 LINE L2 362 508 -2806 242 336 105 37 chr5 132473910 132474205 -67155945 + L2 LINE L2 1267 1581 -1733 2759 3 0 0 chr5 132474208 132474508 -67155642 - AluYa8 SINE Alu -10 300 1 458 302 71 31 chr5 132474539 132474794 -67155356 + L1M3d LINE L1 9 273 -5618 1515 289 67 64 chr5 132474802 132475505 -67154645 + L1M4c LINE L1 640 1344 -5309 2540 261 46 28 chr5 132475507 132477366 -67152784 + L1M4c LINE L1 1365 3365 -3367 2184 213 8 88 chr5 132477366 132477968 -67152182 - MLT2B3 LTR ERVL 0 554 1 1240 175 53 53 chr5 132477968 132478305 -67151845 - ERVL-B3 LTR ERVL -7 5757 5421 6587 159 36 11 chr5 132478324 132479459 -67150691 - ERVL-B3 LTR ERVL -724 5040 3877 1935 194 28 16 chr5 132479458 132480075 -67150075 - ERVL-B3 LTR ERVL -2026 3738 3036 * 287 248 152 8 chr5 132480180 132480305 -67149845 + L1MC4a LINE L1 5293 5435 -2373 1054 295 55 3 chr5 132480308 132480671 -67149479 + L1MC4a LINE L1 5500 5881 -1927 727 302 10 72 chr5 132480758 132481049 -67149101 - ERVL-B3 LTR ERVL -1900 3096 2824 1073 296 93 42 chr5 132481169 132481784 -67148366 - ERVL-B3 LTR ERVL -3303 2461 1816 1293 184 56 22 chr5 132483519 132483910 -67146240 + L1MC3 LINE L1 7504 7785 0 1664 181 89 11 chr5 132484046 132484395 -67145755 - L1MC3 LINE L1 -940 6845 6470 515 256 71 30 chr5 132485010 132485178 -67144972 + MIR SINE MIR 33 207 -55 2234 82 27 7 chr5 132485734 132486028 -67144122 + AluSp SINE Alu 1 300 -13 9011 149 12 8 chr5 132486321 132487738 -67142412 + L1M1 LINE L1 2 1423 -6142 * 14716 178 22 8 chr5 132487735 132488369 -67141781 + L1M1 LINE L1 2899 3522 -4043 2013 138 3 0 chr5 132488369 132488674 -67141476 - AluY SINE Alu -5 306 1 14716 178 22 8 chr5 132488674 132489830 -67140320 + L1M1 LINE L1 3522 4660 -2905 2212 127 0 0 chr5 132489830 132490138 -67140012 + AluY SINE Alu 1 308 -3 14716 178 22 8 chr5 132490138 132492099 -67138051 + L1M1 LINE L1 4660 6706 -859 8719 167 36 10 chr5 132492099 132493679 -67136471 - Tigger7 DNA MER2_type -866 1621 1 1135 211 0 0 chr5 132494262 132494471 -67135679 - Tigger7 DNA MER2_type -2187 300 92 21 0 0 0 chr5 132495617 132495638 -67134512 + AT_rich Low_complexity Low_complexity 1 21 0 241 189 0 0 chr5 132496079 132496116 -67134034 + L2 LINE L2 3201 3237 -35 191 325 160 43 chr5 132496150 132496338 -67133812 - L3 LINE CR1 -546 1031 822 613 194 7 50 chr5 132496371 132496510 -67133640 - FLAM_A SINE Alu 0 133 1 1938 191 78 41 chr5 132496874 132497361 -67132789 + MLT1D LTR MaLR 1 505 0 890 173 45 22 chr5 132498311 132498490 -67131660 + MER5A DNA MER1_type 7 189 0 27 62 0 0 chr5 132499521 132499569 -67130581 + AT_rich Low_complexity Low_complexity 1 48 0 307 355 87 20 chr5 132499902 132500201 -67129949 + L2 LINE L2 1756 2074 -1240 313 218 7 150 chr5 132501781 132501928 -67128222 - L1M4c LINE L1 -4118 2445 2320 251 232 36 37 chr5 132501980 132502117 -67128033 - L1M4c LINE L1 -4900 1503 1265 356 309 73 48 chr5 132502211 132502674 -67127476 + L1ME3A LINE L1 4742 5216 -930 31 44 0 0 chr5 132503337 132503382 -67126768 + AT_rich Low_complexity Low_complexity 1 45 0 245 298 175 9 chr5 132503522 132503636 -67126514 + MIR SINE MIR 8 140 -122 245 341 55 0 chr5 132504024 132504115 -67126035 - MER5A DNA MER1_type -84 105 10 429 20 0 0 chr5 132504972 132505022 -67125128 + (TG)n Simple_repeat Simple_repeat 2 51 0 521 256 22 0 chr5 132505248 132505385 -67124765 + MLT1I LTR MaLR 3 142 -267 2067 173 45 17 chr5 132505389 132505811 -67124339 + Tigger2a DNA MER2_type 1 434 0 294 244 24 12 chr5 132505884 132505966 -67124184 + MLT1I LTR MaLR 309 391 -18 730 302 48 22 chr5 132506747 132507254 -67122896 + L1ME3A LINE L1 5352 5873 -297 25 31 0 0 chr5 132507292 132507324 -67122826 + AT_rich Low_complexity Low_complexity 1 32 0 248 289 29 10 chr5 132507631 132507735 -67122415 - L1ME LINE L1 -248 5873 5768 310 329 155 5 chr5 132507814 132508021 -67122129 - MIR SINE MIR 0 262 25 295 311 68 20 chr5 132508112 132508260 -67121890 + MLT1J2 LTR MaLR 3 157 -293 198 0 0 0 chr5 132508522 132508544 -67121606 + (A)n Simple_repeat Simple_repeat 1 22 0 383 290 76 14 chr5 132508926 132509071 -67121079 + MIR SINE MIR 48 201 -61 1514 221 96 48 chr5 132509080 132509560 -67120590 + MLT1D LTR MaLR 3 505 0 345 306 43 93 chr5 132510020 132510278 -67119872 + MIR SINE MIR 4 248 -14 350 337 15 25 chr5 132511037 132511233 -67118917 + MLT1L LTR MaLR 201 394 -221 3590 137 57 37 chr5 132511473 132511501 -67118649 + Tigger2 DNA MER2_type 1 27 -2691 1938 61 140 43 chr5 132511501 132511779 -67118371 + AluSq SINE Alu 1 305 -8 3590 137 57 37 chr5 132511779 132512193 -67117957 + Tigger2 DNA MER2_type 27 466 -2252 2211 106 13 7 chr5 132512193 132512494 -67117656 + AluSx SINE Alu 1 303 -9 3590 137 57 37 chr5 132512494 132512785 -67117365 + Tigger2 DNA MER2_type 466 750 -1968 1120 153 14 96 chr5 132512837 132513118 -67117032 + Tigger2 DNA MER2_type 2461 2718 0 967 303 204 38 chr5 132513220 132514259 -67115891 - L2 LINE L2 -1 3312 2062 1174 188 0 54 chr5 132514260 132514499 -67115651 + AluJo SINE Alu 5 230 -82 270 0 0 0 chr5 132514499 132514529 -67115621 + (A)n Simple_repeat Simple_repeat 1 30 0 451 291 183 51 chr5 132514529 132515055 -67115095 - L2 LINE L2 -1209 2105 1511 2390 64 10 3 chr5 132515748 132516043 -67114107 + AluY SINE Alu 1 297 -14 1857 296 120 66 chr5 132516052 132516304 -67113846 + L2 LINE L2 1462 1699 -1573 1019 175 0 0 chr5 132516304 132516458 -67113692 + FRAM SINE Alu 1 154 -12 1857 296 120 66 chr5 132516458 132517295 -67112855 + L2 LINE L2 1699 2667 -605 1147 178 24 0 chr5 132517295 132517508 -67112642 - MER20 DNA MER1_type 0 219 2 1857 296 120 66 chr5 132517508 132518091 -67112059 + L2 LINE L2 2667 3217 -55 631 250 309 16 chr5 132518755 132519127 -67111023 - L2 LINE L2 -9 3304 2824 724 189 10 95 chr5 132519163 132519362 -67110788 - L1ME2 LINE L1 -73 6097 5910 2288 109 0 0 chr5 132519362 132519656 -67110494 - AluSc SINE Alu -15 294 1 724 189 10 95 chr5 132519656 132519683 -67110467 - L1ME2 LINE L1 -260 5910 5882 753 237 80 43 chr5 132519709 132520059 -67110091 - L1ME2 LINE L1 -541 5623 5261 545 314 49 28 chr5 132520102 132520694 -67109456 - HERV16 LTR ERVL -1654 4000 3390 * 1269 315 17 32 chr5 132520691 132521386 -67108764 - HERV16 LTR ERVL -1905 3091 2612 1874 297 83 1 chr5 132521410 132522073 -67108077 - HERV16 LTR ERVL -3942 1054 338 2508 74 0 0 chr5 132522915 132523213 -67106937 - AluY SINE Alu -13 298 1 698 241 61 58 chr5 132523551 132523862 -67106288 + MLT1H LTR MaLR 1 312 -237 25 51 0 0 chr5 132523951 132523990 -67106160 + AT_rich Low_complexity Low_complexity 1 39 0 227 143 41 0 chr5 132524281 132524330 -67105820 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 1051 274 118 85 chr5 132524550 132526104 -67104046 - HAL1 LINE L1 -791 1716 111 1600 185 13 25 chr5 132526513 132526827 -67103323 - AluJo SINE Alu -2 310 1 292 323 25 57 chr5 132527114 132527272 -67102878 - MIR3 SINE MIR -40 168 16 367 195 9 80 chr5 132528226 132528339 -67101811 + L1PB4 LINE L1 5980 6084 -72 26 30 0 0 chr5 132528675 132528708 -67101442 + AT_rich Low_complexity Low_complexity 1 33 0 791 219 50 10 chr5 132528922 132529123 -67101027 + MLT1C LTR MaLR 259 467 0 2402 85 0 7 chr5 132529261 132529566 -67100584 + AluSq SINE Alu 1 303 -10 2298 119 0 0 chr5 132530742 132531052 -67099098 + AluSx SINE Alu 1 310 -2 2312 112 0 3 chr5 132531353 132531658 -67098492 - AluSx SINE Alu -8 304 1 631 306 73 9 chr5 132532406 132532625 -67097525 + MIR SINE MIR 21 253 -9 189 0 0 0 chr5 132532666 132532687 -67097463 + (ATG)n Simple_repeat Simple_repeat 3 23 0 27 62 0 0 chr5 132533101 132533149 -67097001 + AT_rich Low_complexity Low_complexity 1 48 0 1253 151 27 18 chr5 132533830 132534055 -67096095 - MER7A DNA MER2_type -93 253 29 254 250 36 72 chr5 132534466 132534595 -67095555 - MIR SINE MIR -102 106 5 255 261 77 60 chr5 132535138 132535276 -67094874 - MIR SINE MIR -62 146 31 342 289 22 22 chr5 132535292 132535427 -67094723 + CT-rich Low_complexity Low_complexity 5 139 0 293 299 159 0 chr5 132535559 132535666 -67094484 + L2 LINE L2 3190 3313 0 2121 101 3 17 chr5 132536313 132536628 -67093522 - AluSq SINE Alu 0 311 1 1622 159 35 53 chr5 132537195 132537481 -67092669 + MER7A DNA MER2_type 15 294 -2744 2109 134 16 0 chr5 132537481 132537787 -67092363 - AluSx SINE Alu -1 311 1 1622 159 35 53 chr5 132537787 132537840 -67092310 + MER7A DNA MER2_type 294 346 0 402 315 74 37 chr5 132537959 132538175 -67091975 - MIR SINE MIR -25 237 14 37065 77 8 8 chr5 132538952 132545090 -67085060 + L1PA6 LINE L1 11 6150 -4 214 147 0 0 chr5 132547388 132547422 -67082728 + (CCCCG)n Simple_repeat Simple_repeat 1 34 0 206 211 0 0 chr5 132547951 132547989 -67082161 + GA-rich Low_complexity Low_complexity 3 40 0 35110 74 3 3 chr5 132550358 132556142 -67074008 + L1PA5 LINE L1 366 6151 -3 21 0 0 0 chr5 132556205 132556226 -67073924 + AT_rich Low_complexity Low_complexity 1 21 0 303 307 25 0 chr5 132557168 132557331 -67072819 - L1MC5 LINE L1 -184 7777 7611 238 254 37 15 chr5 132557389 132557523 -67072627 - L1MC5 LINE L1 -476 7485 7349 332 226 65 0 chr5 132557548 132557641 -67072509 - L1MC5 LINE L1 -601 7360 7262 257 238 19 76 chr5 132557808 132557913 -67072237 - L1MC4a LINE L1 -600 7208 7110 1173 274 41 11 chr5 132558256 132558716 -67071434 - L1MC4a LINE L1 -1811 5997 5524 3936 29 8 12 chr5 132559354 132559844 -67070306 - L1PA4 LINE L1 -3 6152 5665 1689 154 0 32 chr5 132560311 132560591 -67069559 - AluJb SINE Alu -41 271 1 29 47 0 0 chr5 132560799 132560842 -67069308 + AT_rich Low_complexity Low_complexity 1 43 0 2403 216 43 84 chr5 132560903 132561385 -67068765 - L1ME1 LINE L1 -5 6230 5805 2129 119 0 0 chr5 132561385 132561670 -67068480 + AluSq SINE Alu 4 288 -25 2403 216 43 84 chr5 132561670 132562134 -67068016 - L1ME1 LINE L1 -430 5805 5323 3726 128 12 4 chr5 132562135 132562697 -67067453 + MER39B LTR ERV1 1 567 -86 836 180 0 13 chr5 132562697 132562847 -67067303 - FRAM SINE Alu -12 164 17 395 143 143 24 chr5 132562862 132562946 -67067204 + MER39B LTR ERV1 558 651 -2 4878 241 31 54 chr5 132562950 132564083 -67066067 - L1ME1 LINE L1 -899 5316 4159 2888 13 0 0 chr5 132564083 132564397 -67065753 + AluYb8 SINE Alu 1 314 -4 4878 241 31 54 chr5 132564397 132564688 -67065462 - L1ME1 LINE L1 -2056 4159 3863 1386 183 33 43 chr5 132564688 132564988 -67065162 + AluJb SINE Alu 4 300 -12 4878 241 31 54 chr5 132564988 132565511 -67064639 - L1ME1 LINE L1 -2352 3863 3412 707 207 42 89 chr5 132565513 132565750 -67064400 + MLT1D LTR MaLR 1 226 -279 593 102 11 11 chr5 132565757 132565845 -67064305 + AluSp SINE Alu 77 164 -149 5709 85 1 0 chr5 132565845 132566625 -67063525 - L1P LINE L1 -4052 2094 1314 * 17741 67 4 2 chr5 132566624 132569131 -67061019 + L1P2 LINE L1 3010 5525 -629 * 43242 49 3 4 chr5 132569100 132575218 -67054932 + L1PA6 LINE L1 1 6111 -43 294 48 24 0 chr5 132575263 132575305 -67054845 + L1PA6 LINE L1 6106 6148 -6 625 177 0 62 chr5 132575305 132575435 -67054715 + MLT1D LTR MaLR 384 505 0 1761 259 84 47 chr5 132575435 132575587 -67054563 - L1ME1 LINE L1 -2802 3413 3268 1388 183 90 11 chr5 132575587 132575866 -67054284 + AluJo SINE Alu 2 302 0 1761 259 84 47 chr5 132575866 132576674 -67053476 - L1ME1 LINE L1 -2947 3268 2407 2719 272 38 23 chr5 132576694 132576818 -67053332 - L1ME1 LINE L1 -5388 1008 887 1697 175 0 26 chr5 132576818 132577121 -67053029 - AluJo SINE Alu -13 299 5 2719 272 38 23 chr5 132577121 132577957 -67052193 - L1ME1 LINE L1 -5509 887 34 215 309 64 0 chr5 132578510 132578604 -67051546 + MIR SINE MIR 102 201 -61 2065 129 0 0 chr5 132579045 132579353 -67050797 - AluSx SINE Alu 0 310 3 3539 94 6 6 chr5 132579411 132579898 -67050252 - LTR15 LTR ERV1 -6 487 1 815 149 15 30 chr5 132579985 132580119 -67050031 - FLAM_C SINE Alu 0 133 2 3128 113 55 10 chr5 132580168 132580657 -67049493 + MER9 LTR ERVK 1 511 0 385 356 88 42 chr5 132580958 132581242 -67048908 - L2 LINE L2 0 3272 2976 923 188 13 0 chr5 132581753 132581902 -67048248 - FRAM SINE Alu -30 146 1 404 228 0 0 chr5 132582056 132582135 -67048015 + Tigger3(Golem) DNA MER2_type 2959 3037 0 470 275 96 46 chr5 132584257 132584497 -67045653 - MER112 DNA MER1_type -4 252 1 1980 148 0 0 chr5 132585422 132585729 -67044421 + AluSx SINE Alu 1 307 0 186 375 115 0 chr5 132585830 132585934 -67044216 + L2 LINE L2 3149 3264 -8 816 266 44 24 chr5 132585952 132586200 -67043950 - MIR SINE MIR -8 254 2 417 237 111 82 chr5 132586397 132586604 -67043546 - MLT1J LTR MaLR -34 477 265 857 245 14 23 chr5 132586694 132586910 -67043240 - MLT1J LTR MaLR -297 214 1 187 261 0 62 chr5 132587286 132587351 -67042799 - L2 LINE L2 -9 3304 3244 721 191 22 7 chr5 132587903 132588039 -67042111 + MLT1A1 LTR MaLR 19 156 -209 193 325 288 0 chr5 132588326 132588489 -67041661 + MIR SINE MIR 1 210 -52 1145 135 39 0 chr5 132588495 132588703 -67041447 + L1MA8 LINE L1 6066 6281 -10 355 355 82 4 chr5 132588809 132589077 -67041073 - L2 LINE L2 -13 3300 3012 3641 207 44 20 chr5 132589122 132590676 -67039474 - L1MB8 LINE L1 -245 5933 4342 22 0 0 0 chr5 132590864 132590886 -67039264 + AT_rich Low_complexity Low_complexity 1 22 0 368 235 37 0 chr5 132591741 132591822 -67038328 + MER20 DNA MER1_type 1 84 -135 875 162 0 0 chr5 132591857 132591993 -67038157 + MER20 DNA MER1_type 77 212 -7 384 282 17 34 chr5 132592178 132592295 -67037855 - MIR SINE MIR -147 115 1 1208 198 4 25 chr5 132592634 132592877 -67037273 - MER8 DNA MER2_type 0 239 2 552 235 121 34 chr5 132594716 132595122 -67035028 + MLT1D LTR MaLR 1 359 -6 378 0 0 0 chr5 132595135 132595177 -67034973 + (CA)n Simple_repeat Simple_repeat 2 43 0 2245 105 3 0 chr5 132596384 132596690 -67033460 - AluSq SINE Alu -6 307 1 21 36 0 0 chr5 132597049 132597077 -67033073 + AT_rich Low_complexity Low_complexity 1 28 0 643 310 89 43 chr5 132601388 132601691 -67028459 + L2 LINE L2 2268 2584 -730 2629 105 61 13 chr5 132652359 132652993 -66977157 - L1P4 LINE L1 -616 5552 4889 254 252 129 22 chr5 132653077 132653216 -66976934 - MARNA DNA Mariner -155 431 278 224 206 76 23 chr5 132656364 132656495 -66973655 + (CCTTG)n Simple_repeat Simple_repeat 2 139 0 415 300 32 32 chr5 132656508 132656698 -66973452 - L2 LINE L2 -2 3311 3122 300 322 86 26 chr5 132658498 132658802 -66971348 - HAL1b LINE L1 -574 774 453 4819 215 65 67 chr5 132661457 132664376 -66965774 + L1MB8 LINE L1 3300 6165 -13 7802 18 0 0 chr5 132664533 132665700 -66964450 - L1PA3 LINE L1 0 6155 4989 1928 195 128 0 chr5 132666252 132666688 -66963462 + MER89 LTR ERV1 58 549 -10 571 323 56 5 chr5 132666995 132667193 -66962957 - MIR SINE MIR -54 208 1 180 293 103 0 chr5 132667246 132667304 -66962846 - L2 LINE L2 -51 3262 3199 237 273 182 10 chr5 132667893 132667992 -66962158 + MIR3 SINE MIR 87 202 -6 4215 81 0 4 chr5 132668437 132668993 -66961157 + MER41A LTR ERV1 1 554 0 27 0 0 0 chr5 132669356 132669383 -66960767 + AT_rich Low_complexity Low_complexity 1 27 0 321 171 26 0 chr5 132669477 132669553 -66960597 + L1MA8 LINE L1 6209 6286 -5 629 224 45 19 chr5 132670403 132670559 -66959591 + MIR SINE MIR 69 228 -34 1943 110 58 3 chr5 132672095 132672387 -66957763 + AluSq SINE Alu 1 308 -5 288 53 0 0 chr5 132672556 132672594 -66957556 + (TG)n Simple_repeat Simple_repeat 2 39 0 2046 102 10 45 chr5 132673571 132673885 -66956265 + AluSq SINE Alu 11 313 0 567 78 0 0 chr5 132673885 132673962 -66956188 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 611 289 180 44 chr5 132674297 132674709 -66955441 - L2 LINE L2 -5 3308 2841 208 235 25 62 chr5 132674776 132674857 -66955293 - MER91B DNA MER1_type -31 159 82 250 234 31 16 chr5 132674890 132674954 -66955196 - MER91B DNA MER1_type -63 127 63 29 28 0 0 chr5 132675787 132675823 -66954327 + AT_rich Low_complexity Low_complexity 1 36 0 6368 124 32 21 chr5 132676243 132677297 -66952853 + Tigger3b DNA MER2_type 2 1067 -164 2272 127 9 21 chr5 132677297 132677637 -66952513 + MER1B DNA MER1_type 1 336 -3 1026 172 11 11 chr5 132677637 132677811 -66952339 + Tigger3b DNA MER2_type 1057 1230 -1 2748 16 0 0 chr5 132678173 132678478 -66951672 + AluYa5 SINE Alu 1 305 -6 317 355 70 6 chr5 132678703 132678875 -66951275 - MIR SINE MIR -3 259 77 23 33 0 0 chr5 132679251 132679281 -66950869 + AT_rich Low_complexity Low_complexity 1 30 0 254 273 58 88 chr5 132680277 132680426 -66949724 + MLT1K LTR MaLR 143 300 -288 357 244 96 57 chr5 132680525 132680734 -66949416 + MLT1K LTR MaLR 357 573 -15 255 61 0 0 chr5 132681734 132681767 -66948383 + (ATG)n Simple_repeat Simple_repeat 1 33 0 233 236 0 28 chr5 132682522 132682594 -66947556 + A-rich Low_complexity Low_complexity 5 74 0 207 0 0 0 chr5 132682750 132682773 -66947377 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 442 250 40 0 chr5 132682800 132682900 -66947250 - MER91C DNA MER1_type -26 114 11 260 269 13 26 chr5 132683336 132683414 -66946736 + MIR SINE MIR 52 128 -134 1335 141 45 5 chr5 132683952 132684172 -66945978 + MER30 DNA MER1_type 2 230 0 309 243 0 0 chr5 132684450 132684524 -66945626 - MIR SINE MIR -93 169 96 287 272 58 29 chr5 132684889 132684992 -66945158 - L2 LINE L2 -8 3305 3200 423 320 107 60 chr5 132685245 132685861 -66944289 - L2 LINE L2 -445 2869 2225 659 185 192 13 chr5 132685968 132686119 -66944031 + MER5A DNA MER1_type 1 178 -11 236 348 89 0 chr5 132689940 132690052 -66940098 + L2 LINE L2 3150 3271 -1 15993 154 23 11 chr5 132690103 132697212 -66932938 + L1MA1 LINE L1 12 7717 -4 1640 168 2 111 chr5 132697239 132697645 -66932505 - MLT1B LTR MaLR -28 362 1 296 264 55 11 chr5 132699057 132699148 -66931002 - MER112 DNA MER1_type -13 247 153 373 360 106 35 chr5 132699441 132699714 -66930436 - L2 LINE L2 -6 3266 3014 643 266 120 61 chr5 132699714 132700206 -66929944 - LTR33A LTR ERVL -2 521 1 373 360 106 35 chr5 132700206 132700428 -66929722 - L2 LINE L2 -258 3014 2735 279 0 0 0 chr5 132700435 132700466 -66929684 + (TG)n Simple_repeat Simple_repeat 2 32 0 232 171 0 92 chr5 132700682 132700758 -66929392 - HAL1 LINE L1 -191 2316 2248 2299 85 10 0 chr5 132702290 132702584 -66927566 - AluSp SINE Alu -16 297 1 5816 91 23 22 chr5 132702956 132704404 -66925746 - L1PA13 LINE L1 0 6163 4762 2222 143 36 14 chr5 132704404 132704760 -66925390 - THE1B LTR MaLR 0 364 1 5816 91 23 22 chr5 132704760 132705203 -66924947 - L1PA13 LINE L1 -1401 4762 4321 180 0 0 0 chr5 132705208 132705228 -66924922 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2450 62 7 0 chr5 132705733 132706042 -66924108 - AluY SINE Alu 0 311 1 529 331 65 5 chr5 132706763 132706947 -66923203 - MIR SINE MIR -52 210 16 428 336 8 0 chr5 132707603 132707731 -66922419 + L2 LINE L2 3143 3271 -1 2116 172 14 11 chr5 132707760 132708142 -66922008 + MLT2D LTR ERVL 1 478 -42 547 154 6 24 chr5 132708142 132708311 -66921839 + (TCTA)n Simple_repeat Simple_repeat 2 167 0 23 68 0 0 chr5 132708399 132708443 -66921707 + AT_rich Low_complexity Low_complexity 1 44 0 2108 198 67 19 chr5 132710572 132711052 -66919098 + MLT1D LTR MaLR 3 505 0 307 365 47 34 chr5 132711086 132711190 -66918960 + L1ME LINE L1 5481 5582 -588 1862 124 69 69 chr5 132711190 132711359 -66918791 + THE1B LTR MaLR 1 169 -195 1970 133 25 0 chr5 132711359 132711657 -66918493 + AluSx SINE Alu 1 305 0 1862 124 69 69 chr5 132711657 132711850 -66918300 + THE1B LTR MaLR 168 364 0 307 365 47 34 chr5 132711850 132712138 -66918012 + L1ME LINE L1 5582 5885 -285 693 218 6 6 chr5 132712183 132712339 -66917811 - L1MC4a LINE L1 -796 7012 6857 1320 142 26 0 chr5 132712487 132712719 -66917431 + L1MA5A LINE L1 6055 6292 -5 2626 286 102 20 chr5 132713269 132714480 -66915670 + L2 LINE L2 1978 3280 -33 533 302 77 0 chr5 132716006 132716188 -66913962 + MIR SINE MIR 19 214 -48 389 306 0 34 chr5 132716429 132716576 -66913574 + CT-rich Low_complexity Low_complexity 2 143 0 21 71 0 0 chr5 132717533 132717575 -66912575 + AT_rich Low_complexity Low_complexity 1 42 0 1449 292 101 49 chr5 132717773 132719224 -66910926 - L1MEd LINE L1 -4500 1629 80 3699 169 35 10 chr5 132719224 132719411 -66910739 + L1MB3 LINE L1 5457 5638 -545 2369 159 36 10 chr5 132719411 132719826 -66910324 + MSTB LTR MaLR 1 426 0 3699 169 35 10 chr5 132719826 132720347 -66909803 + L1MB3 LINE L1 5638 6183 0 5215 232 96 42 chr5 132721009 132722719 -66907431 + L1M4b LINE L1 7 1817 -5038 216 0 0 0 chr5 132722719 132722743 -66907407 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5215 232 96 42 chr5 132722743 132722902 -66907248 + L1M4b LINE L1 1817 1966 -4889 27 0 0 0 chr5 132723200 132723227 -66906923 + AT_rich Low_complexity Low_complexity 1 27 0 1904 171 7 0 chr5 132723916 132724226 -66905924 - AluJb SINE Alu 0 312 1 242 353 74 39 chr5 132724893 132725151 -66904999 - L2 LINE L2 -673 2641 2375 2371 185 17 21 chr5 132725197 132725677 -66904473 - MER66A LTR ERV1 0 478 1 186 43 0 0 chr5 132726752 132726775 -66903375 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 6402 138 9 24 chr5 132726775 132727161 -66902989 - L1PB1 LINE L1 -5 6146 5756 1821 122 0 4 chr5 132727161 132727415 -66902735 - AluSq SINE Alu -22 291 39 6402 138 9 24 chr5 132727415 132729050 -66901100 - L1PB1 LINE L1 -395 5756 4157 319 295 106 60 chr5 132730060 132730563 -66899587 - L2 LINE L2 -353 2961 2249 838 266 11 93 chr5 132730900 132731264 -66898886 - L2 LINE L2 -2 3311 2978 407 238 168 0 chr5 132731264 132731407 -66898743 + L1M4b LINE L1 2876 3042 -3917 1784 195 41 0 chr5 132731426 132731816 -66898334 + L1MB7 LINE L1 5706 6111 -73 561 290 95 23 chr5 132731910 132732601 -66897549 + L1MEc LINE L1 900 1676 -4634 507 232 127 14 chr5 132732622 132732842 -66897308 + L1MEd LINE L1 1074 1318 -4887 316 266 35 14 chr5 132732969 132733112 -66897038 + L1MEd LINE L1 1574 1719 -4677 20461 159 36 16 chr5 132733912 132737122 -66893028 - L1MA2 LINE L1 0 7723 4580 1670 167 17 0 chr5 132737122 132737409 -66892741 - AluSx SINE Alu -20 292 1 20461 159 36 16 chr5 132737409 132741755 -66888395 - L1MA2 LINE L1 -3143 4580 11 250 290 0 0 chr5 132742653 132742715 -66887435 + MER94 DNA DNA 1 62 -72 1385 230 69 24 chr5 132743081 132743490 -66886660 + MER114 LTR ERV 31 467 -181 2321 95 0 0 chr5 132743490 132743794 -66886356 - AluSc SINE Alu -5 304 1 1385 230 69 24 chr5 132743794 132743875 -66886275 + MER114 LTR ERV 467 543 -105 22 0 0 0 chr5 132744398 132744420 -66885730 + AT_rich Low_complexity Low_complexity 1 22 0 1540 249 94 10 chr5 132745719 132746221 -66883929 - MLT1H1 LTR MaLR 0 555 12 227 216 84 108 chr5 132746419 132746586 -66883564 - L2 LINE L2 -13 3300 3138 202 211 0 0 chr5 132746985 132747023 -66883127 + (CA)n Simple_repeat Simple_repeat 1 38 0 313 274 20 0 chr5 132748264 132748366 -66881784 - LTR16A LTR ERVL -107 343 240 308 319 9 18 chr5 132748387 132748500 -66881650 - MERVL LTR ERVL -2562 2923 2812 578 269 56 46 chr5 132748592 132748789 -66881361 - MLT1J LTR MaLR -312 199 1 321 230 40 20 chr5 132748789 132748889 -66881261 + HAL1b LINE L1 699 800 -548 762 155 0 0 chr5 132748963 132749079 -66881071 + FLAM_C SINE Alu 1 116 -17 1385 58 0 0 chr5 132749134 132749307 -66880843 - L1PA7 LINE L1 -5 6149 5977 799 309 67 33 chr5 132750583 132750942 -66879208 + L2 LINE L2 2943 3313 0 23 33 0 0 chr5 132751211 132751241 -66878909 + AT_rich Low_complexity Low_complexity 1 30 0 242 298 176 52 chr5 132752183 132752780 -66877370 + L2 LINE L2 1593 2263 -1051 1959 265 126 34 chr5 132752803 132753151 -66876999 + L2 LINE L2 2078 2393 -921 1697 186 23 3 chr5 132753151 132753457 -66876693 - AluJb SINE Alu 0 312 1 1959 265 126 34 chr5 132753457 132753871 -66876279 + L2 LINE L2 2393 2910 -404 750 312 58 53 chr5 132753840 132754254 -66875896 + L2 LINE L2 2818 3233 -80 * 22 0 0 0 chr5 132754428 132754450 -66875700 + AT_rich Low_complexity Low_complexity 1 22 0 237 180 0 0 chr5 132754476 132754526 -66875624 + (TA)n Simple_repeat Simple_repeat 1 50 0 242 377 94 0 chr5 132754640 132754778 -66875372 + L2 LINE L2 2603 2753 -561 6217 87 10 14 chr5 132755588 132756848 -66873302 - L1PA10 LINE L1 -10 6158 4889 405 254 171 28 chr5 132756934 132757151 -66872999 - MARNA DNA Mariner -155 431 184 454 284 37 37 chr5 132758851 132759041 -66871109 + L2 LINE L2 3122 3311 -2 959 114 0 6 chr5 132759056 132759214 -66870936 + (GGAA)n Simple_repeat Simple_repeat 2 158 0 1573 179 7 33 chr5 132759623 132759925 -66870225 + AluJb SINE Alu 13 306 -6 346 269 40 96 chr5 132760414 132760737 -66869413 - L1MEc LINE L1 -2385 4556 4252 615 258 94 8 chr5 132760831 132761075 -66869075 - L1MEc LINE L1 -2897 4044 3780 * 9852 179 72 52 chr5 132761069 132762981 -66867169 + L1MCa LINE L1 21 1893 -4533 2089 134 0 7 chr5 132762981 132763287 -66866863 - AluSx SINE Alu -8 304 1 9852 179 72 52 chr5 132763287 132763863 -66866287 + L1MCa LINE L1 1893 2456 -3970 1694 169 37 10 chr5 132763863 132764159 -66865991 + AluJb SINE Alu 1 304 -8 9852 179 72 52 chr5 132764159 132764367 -66865783 + L1MCa LINE L1 2456 2658 -3768 1465 183 0 38 chr5 132764367 132764656 -66865494 + AluJb SINE Alu 32 309 -3 9852 179 72 52 chr5 132764656 132765720 -66864430 + L1MCa LINE L1 2658 3852 -2574 5078 214 28 22 chr5 132765726 132767060 -66863090 + L1MCa LINE L1 3923 5264 -1162 382 239 30 0 chr5 132767068 132767202 -66862948 - L1MEc LINE L1 -4086 3036 2899 248 290 97 32 chr5 132767226 132767381 -66862769 - L1MEc LINE L1 -5073 1350 1186 264 242 60 49 chr5 132767579 132767752 -66862398 - L1M2 LINE L1 -742 5442 5294 428 337 69 34 chr5 132768206 132768613 -66861537 - L1MC4a LINE L1 -1723 6085 5665 609 260 34 48 chr5 132768630 132768838 -66861312 + L2 LINE L2 3108 3312 -1 222 258 153 61 chr5 132769274 132769437 -66860713 - MIR SINE MIR -50 212 35 232 231 0 0 chr5 132770398 132770437 -66859713 - MER52A LTR ERV1 -1716 39 1 * 3917 178 141 36 chr5 132770437 132771474 -66858676 + MER52C LTR ERV1 132 1278 0 244 217 14 0 chr5 132771480 132771549 -66858601 - L1ME LINE L1 -345 5800 5731 796 230 40 37 chr5 132771549 132771881 -66858269 - MLT1A1 LTR MaLR 0 396 1 655 324 34 10 chr5 132771900 132772196 -66857954 - L1ME LINE L1 -447 5698 5396 * 1432 276 71 48 chr5 132772186 132773057 -66857093 - L1ME LINE L1 -4901 1218 328 1045 242 28 8 chr5 132773410 132773658 -66856492 + MLT1C LTR MaLR 215 467 0 297 300 16 68 chr5 132774241 132774479 -66855671 - L2 LINE L2 -273 2999 2778 208 216 57 40 chr5 132774619 132774709 -66855441 - MIR SINE MIR -31 177 91 2703 50 0 0 chr5 132774782 132775122 -66855028 - L1PA5 LINE L1 -1291 4855 4516 7210 45 1 13 chr5 132775122 132776410 -66853740 + L1PA5 LINE L1 4877 6154 0 1185 295 124 29 chr5 132777141 132777663 -66852487 + L2 LINE L2 1734 2305 -1009 689 251 115 105 chr5 132777695 132778437 -66851713 + HAL1 LINE L1 1108 1856 -651 1606 227 98 102 chr5 132779674 132780509 -66849641 + L1MD1 LINE L1 44 881 -5659 2363 92 0 3 chr5 132780509 132780815 -66849335 - AluSc SINE Alu -4 305 1 1785 158 61 0 chr5 132780821 132781100 -66849050 - AluSx SINE Alu -13 299 4 1606 227 98 102 chr5 132781100 132781175 -66848975 + L1MD1 LINE L1 886 1130 -5410 1925 247 32 10 chr5 132781176 132781772 -66848378 + L1MD1 LINE L1 2843 3451 -3089 1633 240 30 56 chr5 132781819 132782024 -66848126 + L1MD1 LINE L1 4809 5018 -1522 2148 144 36 71 chr5 132782024 132782299 -66847851 + Tigger2a DNA MER2_type 1 255 -2453 2071 104 14 0 chr5 132782299 132782577 -66847573 + AluSx SINE Alu 12 293 -19 2148 144 36 71 chr5 132782577 132782751 -66847399 + Tigger2a DNA MER2_type 255 434 0 1633 240 30 56 chr5 132782751 132783203 -66846947 + L1MD1 LINE L1 5018 5449 -1091 2234 176 14 18 chr5 132783213 132783594 -66846556 + L1MD1 LINE L1 6182 6562 -74 2552 102 31 3 chr5 132783594 132783948 -66846202 + THE1B LTR MaLR 1 364 0 2234 176 14 18 chr5 132783948 132784004 -66846146 + L1MD1 LINE L1 6562 6617 -19 2302 113 3 0 chr5 132784526 132784836 -66845314 - AluSx SINE Alu -1 311 1 303 259 80 25 chr5 132784945 132785107 -66845043 - L1M4 LINE L1 -1446 4700 4530 383 365 25 10 chr5 132785122 132785319 -66844831 - L1M4 LINE L1 -1777 4369 4170 325 262 48 0 chr5 132785359 132785443 -66844707 + L1MC4 LINE L1 6615 6702 -1340 2598 81 57 5 chr5 132785443 132785813 -66844337 + MLT2A1 LTR ERVL 1 389 -55 486 33 0 0 chr5 132785813 132785873 -66844277 + (TA)n Simple_repeat Simple_repeat 1 60 0 384 273 110 34 chr5 132786060 132786269 -66843881 - L1M4 LINE L1 -2920 3226 3002 276 324 188 55 chr5 132793746 132794113 -66836037 + L2 LINE L2 2424 2839 -475 349 256 61 55 chr5 132795651 132795815 -66834335 + L2 LINE L2 3149 3313 0 244 306 61 10 chr5 132796304 132796402 -66833748 - MIR SINE MIR -120 142 40 21 0 0 0 chr5 132796677 132796698 -66833452 + AT_rich Low_complexity Low_complexity 1 21 0 650 152 25 24 chr5 132796698 132796849 -66833301 + L1MA6 LINE L1 6119 6259 -41 365 361 105 23 chr5 132798997 132799216 -66830934 + MIR SINE MIR 2 238 -24 408 262 65 0 chr5 132799301 132799408 -66830742 + MER81 DNA DNA 1 114 0 25 0 0 0 chr5 132800390 132800415 -66829735 + AT_rich Low_complexity Low_complexity 1 25 0 679 131 0 0 chr5 132800437 132800536 -66829614 + FLAM_A SINE Alu 18 116 -26 538 307 52 9 chr5 132800589 132800801 -66829349 - MIR SINE MIR -37 225 5 281 236 29 79 chr5 132801564 132801704 -66828446 + L1MC4a LINE L1 5754 5886 -1922 2618 39 0 6 chr5 132801741 132802052 -66828098 - AluY SINE Alu -2 309 1 712 311 150 34 chr5 132802508 132803382 -66826768 - L2 LINE L2 0 3313 789 519 200 163 11 chr5 132803430 132803608 -66826542 - MLT1A1 LTR MaLR -6 377 123 543 315 9 28 chr5 132803792 132804008 -66826142 - MIR SINE MIR -49 213 2 428 239 44 0 chr5 132805618 132805731 -66824419 - MIR SINE MIR -6 256 139 1017 211 36 32 chr5 132806588 132806839 -66823311 + MIR SINE MIR 10 261 -1 292 198 10 21 chr5 132808516 132808612 -66821538 + (CCA)n Simple_repeat Simple_repeat 3 97 0 2358 102 0 0 chr5 132808993 132809298 -66820852 + AluSq SINE Alu 1 305 -8 2465 116 26 5 chr5 132809741 132810122 -66820028 - L1PA15 LINE L1 -1 6164 5776 2359 75 0 30 chr5 132810126 132810431 -66819719 - AluY SINE Alu -15 296 1 7211 188 11 8 chr5 132810442 132812710 -66817440 - L1PA14 LINE L1 0 6161 3863 22 56 0 0 chr5 132812956 132812992 -66817158 + AT_rich Low_complexity Low_complexity 1 36 0 193 270 27 68 chr5 132813019 132813093 -66817057 + L3 LINE CR1 1507 1577 0 207 264 19 0 chr5 132813791 132813844 -66816306 + MIR SINE MIR 98 151 -57 318 406 6 38 chr5 132813997 132814076 -66816074 - L2 LINE L2 -1 3271 3198 1428 238 52 18 chr5 132814076 132814459 -66815691 + MSTD LTR MaLR 1 396 0 318 406 6 38 chr5 132814459 132814539 -66815611 - L2 LINE L2 -74 3198 3117 464 205 11 1 chr5 132816191 132816295 -66813855 + MLT1D LTR MaLR 9 109 -403 398 145 26 0 chr5 132816285 132816361 -66813789 + MLT1D LTR MaLR 428 505 0 * 316 286 8 30 chr5 132817057 132817190 -66812960 - LTR67 LTR ERVL 0 557 428 662 302 36 36 chr5 132817395 132817647 -66812503 - MIR SINE MIR -10 252 1 457 256 0 68 chr5 132817855 132817988 -66812162 + L2 LINE L2 3190 3313 0 1531 203 0 54 chr5 132818404 132818719 -66811431 + AluJo SINE Alu 1 298 -14 217 374 61 0 chr5 132819748 132819847 -66810303 + L2 LINE L2 3168 3272 0 207 0 0 0 chr5 132819938 132819961 -66810189 + (GA)n Simple_repeat Simple_repeat 1 23 0 365 182 0 26 chr5 132820221 132820298 -66809852 + MER58 DNA MER1_type 2345 2419 -1 363 240 0 0 chr5 132820298 132820369 -66809781 - MER58 DNA MER1_type -73 268 198 281 319 52 32 chr5 132820400 132820651 -66809499 - L2 LINE L2 -189 3083 2828 339 240 19 58 chr5 132820664 132820768 -66809382 + L2 LINE L2 3173 3272 0 474 289 29 49 chr5 132820857 132821061 -66809089 + MIR SINE MIR 63 262 0 3721 188 35 7 chr5 132822298 132823010 -66807140 - MER44D DNA MER2_type 0 605 2 365 233 58 12 chr5 132823495 132823581 -66806569 + MIR SINE MIR 1 90 -172 1869 163 29 102 chr5 132823582 132824133 -66806017 + LTR8 LTR ERV1 1 511 -180 1250 121 0 0 chr5 132824409 132824591 -66805559 + LTR8 LTR ERV1 510 691 0 322 269 11 75 chr5 132824592 132824685 -66805465 + MIR SINE MIR 89 176 -32 297 0 0 0 chr5 132825106 132825139 -66805011 + (CA)n Simple_repeat Simple_repeat 2 34 0 24 53 0 0 chr5 132825492 132825530 -66804620 + AT_rich Low_complexity Low_complexity 1 38 0 2623 24 0 0 chr5 132825581 132825874 -66804276 + AluY SINE Alu 1 293 -18 400 322 42 33 chr5 132825945 132826203 -66803947 - L1MC3 LINE L1 -360 6198 5981 388 284 236 17 chr5 132826273 132826616 -66803534 - L1MC3 LINE L1 -2157 4383 3971 2228 97 0 10 chr5 132827079 132827397 -66802753 - AluSq SINE Alu 0 315 1 192 125 0 0 chr5 132827710 132827742 -66802408 + (TG)n Simple_repeat Simple_repeat 1 32 0 238 222 19 0 chr5 132827886 132827940 -66802210 + MER45 DNA AcHobo 1526 1580 -1 207 0 0 0 chr5 132827984 132828007 -66802143 + (CA)n Simple_repeat Simple_repeat 2 24 0 748 271 143 3 chr5 132828007 132828350 -66801800 - L1M3 LINE L1 -523 5647 5267 2431 54 17 0 chr5 132828351 132828647 -66801503 + AluY SINE Alu 1 301 -10 318 26 0 0 chr5 132828684 132828723 -66801427 + (TG)n Simple_repeat Simple_repeat 2 40 0 315 268 145 39 chr5 132828946 132829642 -66800508 - L1MC3 LINE L1 -4137 2584 1798 23 0 0 0 chr5 132830425 132830448 -66799702 + AT_rich Low_complexity Low_complexity 1 23 0 1296 216 45 22 chr5 132830451 132830808 -66799342 - L1ME2 LINE L1 -66 6098 5734 977 232 15 17 chr5 132831197 132831497 -66798653 - L1ME1 LINE L1 -13 6153 5858 2113 267 21 24 chr5 132831498 132832220 -66797930 - L1ME1 LINE L1 -5 6161 5442 939 220 48 15 chr5 132832238 132832506 -66797644 + L1M4 LINE L1 4572 4848 -1298 721 214 14 7 chr5 132832532 132832677 -66797473 - L2 LINE L2 0 3313 3168 853 203 31 16 chr5 132832677 132832869 -66797281 + AluJb SINE Alu 118 312 0 731 249 165 7 chr5 132832976 132833273 -66796877 - L2 LINE L2 -339 2975 2632 2411 126 60 19 chr5 132835068 132835498 -66794652 - LTR7 LTR ERV1 -2 448 1 3147 104 66 11 chr5 132835498 132835988 -66794162 - HERVH LTR ERV1 0 7713 7191 373 0 58 0 chr5 132835988 132836040 -66794110 + (TTTTG)n Simple_repeat Simple_repeat 3 57 0 3147 104 66 11 chr5 132836040 132836077 -66794073 - HERVH LTR ERV1 -522 7191 7157 2105 164 17 5 chr5 132836070 132836492 -66793658 - HERVH LTR ERV1 -1697 6016 5590 * 7496 137 19 8 chr5 132836483 132838320 -66791830 - HERVH LTR ERV1 -2287 4242 3357 5077 123 7 15 chr5 132838320 132839727 -66790423 - HERVH LTR ERV1 -4883 2830 1393 10878 114 43 21 chr5 132839788 132841672 -66788478 - L1P LINE L1 -772 5374 3449 5007 102 4 0 chr5 132841673 132842381 -66787769 + L1PA8 LINE L1 5462 6172 0 219 69 0 0 chr5 132843021 132843050 -66787100 + (T)n Simple_repeat Simple_repeat 1 29 0 26 30 0 0 chr5 132844417 132844450 -66785700 + AT_rich Low_complexity Low_complexity 1 33 0 1844 133 44 94 chr5 132844666 132845049 -66785101 + THE1B LTR MaLR 1 364 0 2506 75 28 3 chr5 132845049 132845408 -66784742 + THE1B-int LTR MaLR 1 368 -1212 1161 137 54 54 chr5 132845410 132845651 -66784499 + THE1B LTR MaLR 124 364 0 30 59 0 0 chr5 132845721 132845772 -66784378 + AT_rich Low_complexity Low_complexity 1 51 0 1504 168 32 14 chr5 132845949 132846229 -66783921 - AluJb SINE Alu -6 306 22 21 0 0 0 chr5 132846652 132846673 -66783477 + AT_rich Low_complexity Low_complexity 1 21 0 2144 118 50 16 chr5 132846911 132847274 -66782876 - THE1C LTR MaLR 0 375 1 688 89 0 0 chr5 132847456 132847557 -66782593 + AluY SINE Alu 209 309 -2 400 324 116 42 chr5 132848724 132849012 -66781138 + L2 LINE L2 2499 2764 -549 2164 135 0 0 chr5 132849012 132849309 -66780841 - AluSx SINE Alu -15 297 1 400 324 116 42 chr5 132849309 132849755 -66780395 + L2 LINE L2 2764 3313 0 254 273 164 0 chr5 132850135 132850245 -66779905 - MLT1J2 LTR MaLR -121 329 202 306 292 36 7 chr5 132850280 132850417 -66779733 - MLT1J2 LTR MaLR -307 143 3 2200 120 0 0 chr5 132850993 132851301 -66778849 - AluSx SINE Alu -4 308 1 250 272 68 19 chr5 132851804 132851907 -66778243 + MIR SINE MIR 105 212 -50 251 316 26 0 chr5 132851997 132852073 -66778077 + L2 LINE L2 3193 3270 -2 894 343 49 25 chr5 132853145 132853777 -66776373 + L1MC4a LINE L1 4594 5240 -906 330 206 61 61 chr5 132853791 132853956 -66776194 + L1MC4a LINE L1 5256 5420 -2388 908 201 15 140 chr5 132853957 132854350 -66775800 - MER2 DNA MER2_type -1 344 1 1000 275 171 15 chr5 132854350 132854899 -66775251 + L1MC4a LINE L1 5424 6058 -1750 345 283 200 7 chr5 132854909 132855054 -66775096 + L1MC4a LINE L1 6000 6172 -1636 515 304 126 0 chr5 132855101 132855348 -66774802 + L1MC4a LINE L1 6643 6920 -888 539 306 55 21 chr5 132855364 132855599 -66774551 - L2 LINE L2 -248 3065 2823 2400 88 3 0 chr5 132855706 132856011 -66774139 + AluSp SINE Alu 1 306 -7 819 162 0 7 chr5 132856306 132856442 -66773708 + FLAM_C SINE Alu 1 135 -8 468 297 63 8 chr5 132857379 132857618 -66772532 + MLT1J1 LTR MaLR 153 404 -42 1101 301 23 17 chr5 132857641 132857987 -66772163 - L2 LINE L2 -2667 647 300 1850 94 0 0 chr5 132857995 132858228 -66771922 - AluSc SINE Alu -76 233 1 1763 160 0 49 chr5 132858270 132858606 -66771544 - AluSx SINE Alu 0 312 1 460 239 0 69 chr5 132858700 132858830 -66771320 - MIR SINE MIR -5 257 137 1670 211 0 16 chr5 132859009 132859321 -66770829 + AluJb SINE Alu 1 307 -5 2363 170 60 0 chr5 132859917 132860352 -66769798 - LOR1b LTR ERV1 0 461 1 189 0 0 0 chr5 132860666 132860687 -66769463 + (TG)n Simple_repeat Simple_repeat 2 22 0 263 111 0 0 chr5 132860687 132860741 -66769409 + LTR66 LTR ERVL 394 447 -163 258 158 0 0 chr5 132860694 132860751 -66769399 - LTR66 LTR ERVL -172 438 382 * 1278 231 46 46 chr5 132862536 132862952 -66767198 + L1MC4a LINE L1 7183 7598 -210 769 179 14 179 chr5 132863020 132863316 -66766834 - MER77 LTR ERV1 -314 291 45 229 269 76 0 chr5 132863316 132863435 -66766715 + L1MD3 LINE L1 7782 7909 -86 1387 222 76 47 chr5 132863438 132863459 -66766691 + MLT1C LTR MaLR 5 24 -443 1666 151 107 20 chr5 132863459 132863804 -66766346 + THE1C LTR MaLR 1 375 0 1387 222 76 47 chr5 132863804 132864232 -66765918 + MLT1C LTR MaLR 24 467 0 315 211 14 0 chr5 132864232 132864303 -66765847 + L1MD3 LINE L1 7904 7975 -20 420 266 26 73 chr5 132864326 132864559 -66765591 + MER102a DNA MER1_type 97 318 -12 399 73 0 0 chr5 132866047 132866102 -66764048 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 234 294 15 0 chr5 132866146 132866214 -66763936 - L2 LINE L2 -217 3055 2987 354 264 192 12 chr5 132866325 132866492 -66763658 - MIR SINE MIR -34 228 32 288 271 8 98 chr5 132866743 132866759 -66763391 - MIR SINE MIR -135 127 111 547 297 16 11 chr5 132866759 132866944 -66763206 - MER5A DNA MER1_type -1 188 3 288 271 8 98 chr5 132866944 132867049 -66763101 - MIR SINE MIR -151 111 17 320 109 0 0 chr5 132867256 132867302 -66762848 - MSTD LTR MaLR 0 396 351 4792 235 82 32 chr5 132867302 132868717 -66761433 - MSTD-int LTR MaLR -248 1487 2 666 219 59 15 chr5 132868735 132869027 -66761123 - MSTD LTR MaLR -45 350 1 5115 137 61 6 chr5 132869094 132869950 -66760200 + MER4D LTR ERV1 1 903 0 380 292 195 15 chr5 132873228 132873423 -66756727 - MIR SINE MIR -2 260 31 315 305 76 9 chr5 132874684 132874789 -66755361 - MIR SINE MIR -126 136 25 460 231 96 19 chr5 132875031 132875187 -66754963 + LTR50 LTR ERVL 119 286 -509 881 242 126 3 chr5 132875226 132875542 -66754608 + LTR50 LTR ERVL 353 795 0 209 318 86 41 chr5 132875713 132875933 -66754217 - L2 LINE L2 -214 3058 2829 1191 226 123 70 chr5 132876790 132877255 -66752895 - MLT1H1 LTR MaLR 0 555 57 2350 114 87 22 chr5 132877255 132877657 -66752493 + MSTA LTR MaLR 1 428 0 1191 226 123 70 chr5 132877657 132877718 -66752432 - MLT1H1 LTR MaLR -498 57 1 327 271 86 33 chr5 132877870 132878021 -66752129 + MIR SINE MIR 74 232 -30 1148 195 8 16 chr5 132878487 132878744 -66751406 + L1MB1 LINE L1 5912 6166 -2 22 0 0 0 chr5 132878750 132878772 -66751378 + AT_rich Low_complexity Low_complexity 1 22 0 633 110 0 0 chr5 132879541 132879641 -66750509 + (TGGA)n Simple_repeat Simple_repeat 1 100 0 604 346 118 11 chr5 132879663 132879935 -66750215 - L2 LINE L2 -2825 489 189 21 71 0 0 chr5 132880196 132880238 -66749912 + AT_rich Low_complexity Low_complexity 1 42 0 229 315 79 32 chr5 132880307 132880812 -66749338 + L1ME3A LINE L1 3092 3620 -2526 1269 275 54 22 chr5 132881053 132881740 -66748410 + L1ME3A LINE L1 5254 5962 -208 758 120 8 23 chr5 132882301 132882458 -66747692 - FLAM_C SINE Alu 0 167 13 22 35 0 0 chr5 132883318 132883347 -66746803 + AT_rich Low_complexity Low_complexity 1 29 0 584 336 232 15 chr5 132883801 132884611 -66745539 - L3 LINE CR1 -421 1156 92 243 0 0 0 chr5 132884742 132884769 -66745381 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 24 53 0 0 chr5 132885514 132885552 -66744598 + AT_rich Low_complexity Low_complexity 1 38 0 180 0 0 0 chr5 132885782 132885802 -66744348 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 298 299 132 29 chr5 132886644 132886818 -66743332 - MIR SINE MIR -51 211 20 513 273 20 66 chr5 132887203 132887401 -66742749 - MIR SINE MIR -56 206 18 28 29 0 0 chr5 132887662 132887697 -66742453 + AT_rich Low_complexity Low_complexity 1 35 0 262 316 60 8 chr5 132887949 132888082 -66742068 + MIR3 SINE MIR 34 173 -35 724 254 67 33 chr5 132889802 132890042 -66740108 - MIR SINE MIR 0 262 15 348 318 73 7 chr5 132890614 132890765 -66739385 + MIR SINE MIR 100 260 -2 230 225 115 88 chr5 132891666 132891848 -66738302 + L2 LINE L2 3124 3310 -3 818 128 342 73 chr5 132892295 132892529 -66737621 + AluJo SINE Alu 1 297 -5 292 282 78 10 chr5 132892548 132892651 -66737499 + L2 LINE L2 3163 3272 0 2261 182 97 40 chr5 132893909 132894509 -66735641 - MER92B LTR ERV1 0 636 3 29 47 0 0 chr5 132894889 132894932 -66735218 + AT_rich Low_complexity Low_complexity 1 43 0 1155 113 4 42 chr5 132895556 132895796 -66734354 + LTR7 LTR ERV1 218 448 -2 1449 97 0 133 chr5 132895824 132896155 -66733995 + HERVH LTR ERV1 1691 1977 -5736 1656 82 0 8 chr5 132896155 132896398 -66733752 + LTR7 LTR ERV1 202 442 -8 721 146 0 0 chr5 132896407 132896510 -66733640 - AluJb SINE Alu -207 105 3 2527 157 12 37 chr5 132896643 132897135 -66733015 + ERVL-B3 LTR ERVL 4017 4496 -1268 2125 159 19 14 chr5 132897542 132897907 -66732243 - ERVL LTR ERVL -2232 3532 3166 * 11599 161 19 25 chr5 132897897 132898345 -66731805 + ERVL-B3 LTR ERVL 3528 3977 -1787 1737 199 3 13 chr5 132898345 132898652 -66731498 + AluJb SINE Alu 1 304 -8 11599 161 19 25 chr5 132898652 132900447 -66729703 + ERVL-B3 LTR ERVL 3977 5757 -7 2805 179 35 19 chr5 132900447 132900951 -66729199 + MLT2B3 LTR ERVL 1 516 -38 194 0 39 0 chr5 132900951 132900977 -66729173 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 2805 179 35 19 chr5 132900977 132901013 -66729137 + MLT2B3 LTR ERVL 516 550 -4 540 249 122 6 chr5 132901053 132901234 -66728916 - LTR33 LTR ERVL -190 331 130 322 262 9 28 chr5 132901475 132901582 -66728568 + MER102b DNA MER1_type 231 335 -6 246 395 66 25 chr5 132901654 132901897 -66728253 - L2 LINE L2 -213 3059 2807 194 277 10 109 chr5 132901967 132902068 -66728082 + MER5A DNA MER1_type 12 102 -87 330 286 30 48 chr5 132903943 132904111 -66726039 + ERVL LTR ERVL 4422 4586 -1178 1479 224 56 30 chr5 132904224 132904832 -66725318 - L1ME LINE L1 -473 5691 5074 2184 139 16 29 chr5 132904834 132905214 -66724936 - THE1C LTR MaLR 0 375 1 540 133 9 80 chr5 132905220 132905333 -66724817 - THE1C LTR MaLR -270 105 1 10531 115 9 30 chr5 132905333 132906947 -66723203 - THE1C-int LTR MaLR 0 1580 1 2053 149 13 46 chr5 132906947 132907335 -66722815 - THE1C LTR MaLR 0 375 1 1057 299 72 28 chr5 132907394 132907852 -66722298 - MLT1G1 LTR MaLR 0 595 118 3080 247 65 62 chr5 132907927 132909482 -66720668 - L1ME LINE L1 -1130 5016 3458 442 247 174 17 chr5 132909477 132909712 -66720438 - L1ME LINE L1 -3491 2655 2384 * 1563 136 178 6 chr5 132909968 132910299 -66719851 + MSTA LTR MaLR 2 389 -39 18646 133 11 91 chr5 132910309 132914408 -66715742 + L1P LINE L1 12 3783 -2363 1062 329 36 49 chr5 133114483 133114700 -66515450 - MERVL LTR ERVL -1854 3631 3413 1618 153 60 33 chr5 133114700 133115000 -66515150 - AluJb SINE Alu -4 308 1 1062 329 36 49 chr5 133115000 133115414 -66514736 - MERVL LTR ERVL -2072 3413 3008 243 238 0 0 chr5 133115512 133115575 -66514575 + L1MC5 LINE L1 7763 7825 -136 881 159 18 59 chr5 133115769 133115939 -66514211 + AluJb SINE Alu 114 276 -36 296 278 0 0 chr5 133115977 133116067 -66514083 + L1MC4 LINE L1 6614 6703 -1339 286 217 0 124 chr5 133115979 133116108 -66514042 - L1MC4 LINE L1 -1339 6703 6591 * 252 0 0 0 chr5 133116292 133116320 -66513830 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1511 64 49 124 chr5 133116907 133117174 -66512976 + AluSc SINE Alu 55 301 -8 273 276 211 43 chr5 133118215 133118400 -66511750 - MIR SINE MIR -35 227 12 1880 227 119 50 chr5 133118417 133119037 -66511113 + MER21B LTR ERV1 1 663 -200 826 127 0 113 chr5 133119767 133120058 -66510092 + AluSq SINE Alu 9 266 -47 24 0 0 0 chr5 133120076 133120100 -66510050 + AT_rich Low_complexity Low_complexity 1 24 0 6170 108 5 22 chr5 133122966 133123884 -66506266 + MER11C LTR ERVK 169 1071 0 1859 118 0 34 chr5 133123910 133124173 -66505977 + AluSx SINE Alu 1 254 -58 31 0 0 0 chr5 133124303 133124334 -66505816 + AT_rich Low_complexity Low_complexity 1 31 0 1601 129 24 16 chr5 133125076 133125331 -66504819 + MER47A DNA MER2_type 1 257 -109 1130 142 0 0 chr5 133126108 133126270 -66503880 + AluSq SINE Alu 42 203 -110 1269 257 176 2 chr5 133126653 133127136 -66503014 + L2 LINE L2 964 1530 -1784 1736 131 45 0 chr5 133127138 133127382 -66502768 - AluSx SINE Alu -57 255 1 228 294 119 40 chr5 133127433 133127559 -66502591 - L2 LINE L2 -580 2734 2599 205 232 28 44 chr5 133128118 133128299 -66501851 + (TTA)n Simple_repeat Simple_repeat 2 179 0 610 103 0 21 chr5 133128525 133128622 -66501528 - AluY SINE Alu -211 100 6 304 200 57 0 chr5 133128632 133128702 -66501448 - MER94 DNA DNA -60 74 1 182 299 66 15 chr5 133129303 133129440 -66500710 + L2 LINE L2 2123 2266 -1048 312 222 51 17 chr5 133129694 133129811 -66500339 - AluSq/x SINE Alu -179 123 3 181 308 62 20 chr5 133129930 133130076 -66500074 + L2 LINE L2 2236 2387 -927 1854 153 0 0 chr5 133130266 133130534 -66499616 + AluSx SINE Alu 35 302 -10 762 205 13 0 chr5 133130559 133130710 -66499440 + AluSg SINE Alu 3 155 -155 716 258 58 27 chr5 133131021 133131246 -66498904 + MER46C DNA MER2_type 50 281 -57 897 169 164 15 chr5 133131249 133131450 -66498700 - MSTD LTR MaLR 0 396 166 321 143 0 18 chr5 133131494 133131550 -66498600 - MSTD LTR MaLR -341 55 1 280 237 0 0 chr5 133131550 133131608 -66498542 + MER46C DNA MER2_type 280 337 -1 333 0 0 0 chr5 133132328 133132365 -66497785 + (CA)n Simple_repeat Simple_repeat 1 37 0 2875 145 121 14 chr5 133132815 133133367 -66496783 - LTR36 LTR ERV1 0 611 1 308 211 0 0 chr5 133133408 133133465 -66496685 - AluJ/monomer SINE Alu -8 294 238 762 105 34 255 chr5 133133721 133133783 -66496367 + MER33 DNA MER1_type 3 77 -2508 1785 161 3 36 chr5 133133783 133134110 -66496040 + AluJo SINE Alu 1 312 0 762 105 34 255 chr5 133134110 133134372 -66495778 + MER33 DNA MER1_type 77 255 -69 414 183 275 0 chr5 133134384 133134526 -66495624 - MER53 DNA DNA -3 186 6 3721 233 34 46 chr5 133135061 133135971 -66494179 + L1M4b LINE L1 227 1125 -5734 2091 142 0 0 chr5 133135974 133136270 -66493880 + AluSx SINE Alu 6 301 -11 1297 189 47 27 chr5 133136282 133136578 -66493572 + L1M4b LINE L1 1314 1615 -5244 407 288 27 4 chr5 133136598 133136727 -66493423 + FLAM_A SINE Alu 1 112 -21 205 156 0 0 chr5 133137044 133137076 -66493074 + (TG)n Simple_repeat Simple_repeat 1 32 0 1983 233 144 70 chr5 133137195 133137993 -66492157 - MER21B LTR ERV1 -1 862 6 752 176 59 7 chr5 133138367 133138520 -66491630 + L1MB7 LINE L1 5994 6154 -30 274 218 0 0 chr5 133138521 133138576 -66491574 + MLT1B LTR MaLR 1 55 -319 1073 202 5 0 chr5 133138678 133138876 -66491274 + MLT1B LTR MaLR 192 390 0 9277 62 3 0 chr5 133140032 133141212 -66488938 - L1P LINE L1 -3438 2708 1525 2170 106 0 11 chr5 133141336 133141620 -66488530 - AluSx SINE Alu -31 281 1 1294 148 10 0 chr5 133141944 133142146 -66488004 + MER3 DNA MER1_type 2 205 -4 10615 59 3 1 chr5 133143291 133144633 -66485517 + L1P LINE L1 3312 4656 -1490 368 256 134 6 chr5 133144806 133144978 -66485172 + MIR SINE MIR 63 256 -6 4319 153 18 26 chr5 133145434 133145821 -66484329 - L1MB7 LINE L1 -9 6175 5786 2128 114 4 0 chr5 133145821 133146123 -66484027 + AluSx SINE Alu 1 303 0 315 0 0 0 chr5 133146123 133146158 -66483992 + (TA)n Simple_repeat Simple_repeat 1 35 0 4319 153 18 26 chr5 133146158 133146568 -66483582 - L1MB7 LINE L1 -396 5788 5383 442 266 25 50 chr5 133146562 133146761 -66483389 - L1M4 LINE L1 -1555 4591 4398 * 269 250 90 42 chr5 133146737 133146881 -66483269 - L1MEc LINE L1 -4669 1727 1577 * 2302 119 0 0 chr5 133147592 133147902 -66482248 + AluSq SINE Alu 4 313 0 1849 167 0 7 chr5 133149009 133149303 -66480847 - AluJb SINE Alu -20 292 1 540 261 202 62 chr5 133149496 133149852 -66480298 + MLT1F1 LTR MaLR 1 431 -136 802 175 0 0 chr5 133149983 133150120 -66480030 - MLT1C-int LTR MaLR -1234 137 1 304 98 0 0 chr5 133150120 133150161 -66479989 - MLT1C LTR MaLR 0 467 427 * 537 187 11 0 chr5 133150157 133150248 -66479902 - MLT1D LTR MaLR -412 93 2 333 0 0 0 chr5 133150279 133150316 -66479834 + (TG)n Simple_repeat Simple_repeat 2 38 0 189 219 95 95 chr5 133151817 133151954 -66478196 + MIR SINE MIR 8 144 -118 594 117 53 0 chr5 133153864 133153958 -66476192 - Tigger1 DNA MER2_type -1218 1200 1102 2190 110 3 29 chr5 133153963 133154273 -66475877 - AluSp SINE Alu -11 302 1 261 0 0 0 chr5 133154290 133154319 -66475831 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 1274 149 0 5 chr5 133154319 133154515 -66475635 - AluJb SINE Alu -32 280 86 2153 82 11 7 chr5 133154515 133154824 -66475326 - AluSx SINE Alu 0 311 2 3012 230 50 5 chr5 133154838 133155602 -66474548 - L1MC4a LINE L1 -2 7806 7009 682 230 106 6 chr5 133157288 133157449 -66472701 - MER5B DNA MER1_type -1 177 1 1769 170 14 7 chr5 133158995 133159284 -66470866 + AluJo SINE Alu 1 291 -21 2632 131 21 58 chr5 133160940 133161117 -66469033 - LTR32 LTR ERVL -1 470 288 2232 108 7 7 chr5 133161117 133161424 -66468726 + AluSq SINE Alu 1 307 -6 2632 131 21 58 chr5 133161424 133161711 -66468439 - LTR32 LTR ERVL -183 288 23 2523 93 0 0 chr5 133161858 133162168 -66467982 - AluSq SINE Alu -3 310 1 1036 206 60 14 chr5 133162660 133162878 -66467272 - MLT1F1 LTR MaLR 0 567 340 504 189 0 0 chr5 133162978 133163068 -66467082 + MER96B DNA MER1_type? 158 247 -170 492 267 25 0 chr5 133163267 133163387 -66466763 + MER94 DNA DNA 6 128 -6 1826 115 8 0 chr5 133164473 133164716 -66465434 - AluSq SINE Alu -68 245 1 2042 147 0 0 chr5 133166451 133166756 -66463394 + AluSx SINE Alu 1 305 0 25 0 0 0 chr5 133166756 133166781 -66463369 + AT_rich Low_complexity Low_complexity 1 25 0 186 333 51 17 chr5 133167577 133167694 -66462456 - MIR3 SINE MIR -83 125 5 2303 104 0 0 chr5 133167789 133168087 -66462063 - AluSx SINE Alu -14 298 1 225 279 198 0 chr5 133168986 133169072 -66461078 - MIR SINE MIR -145 117 15 2449 85 0 0 chr5 133171316 133171611 -66458539 - AluSg1 SINE Alu -14 295 1 488 267 7 27 chr5 133171614 133171760 -66458390 + LTR16C LTR ERVL 349 491 0 591 319 56 61 chr5 133171785 133172193 -66457957 + HERV16 LTR ERVL 465 870 -4126 512 369 29 10 chr5 133172239 133172548 -66457602 + HERV16 LTR ERVL 968 1282 -3714 2453 63 0 0 chr5 133172649 133172934 -66457216 + AluY SINE Alu 1 285 -26 966 335 25 25 chr5 133172951 133173710 -66456440 + HERV16 LTR ERVL 1469 2317 -3337 273 137 39 0 chr5 133174251 133174302 -66455848 + AluSp/q SINE Alu 242 294 -9 26 0 0 0 chr5 133174638 133174664 -66455486 + AT_rich Low_complexity Low_complexity 1 26 0 2429 60 0 3 chr5 133174664 133174975 -66455175 - AluY SINE Alu 0 310 1 186 43 0 0 chr5 133175515 133175538 -66454612 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 2071 165 71 29 chr5 133175640 133176088 -66454062 + MLT1C LTR MaLR 1 467 0 1627 121 0 67 chr5 133176789 133177071 -66453079 - AluSp SINE Alu -49 264 2 549 310 112 32 chr5 133177099 133177438 -66452712 - L3 LINE CR1 -6 1571 1206 413 273 117 82 chr5 133177654 133178476 -66451674 - L2 LINE L2 -341 2973 2123 314 257 29 71 chr5 133179077 133179152 -66450998 + MER94 DNA DNA 1 69 -65 2582 47 3 0 chr5 133179152 133179450 -66450700 + AluY SINE Alu 1 299 -12 314 257 29 71 chr5 133179450 133179514 -66450636 + MER94 DNA DNA 69 134 0 253 314 99 33 chr5 133179560 133179681 -66450469 - MIR SINE MIR -27 235 107 1778 115 57 7 chr5 133179822 133180118 -66450032 + L1MA5A LINE L1 5983 6293 -4 2496 79 0 7 chr5 133180127 133180430 -66449720 + AluSg SINE Alu 1 301 -9 259 335 94 2 chr5 133180898 133181075 -66449075 + MIR SINE MIR 4 197 -11 853 202 12 12 chr5 133181261 133181429 -66448721 - FAM SINE Alu -4 171 4 375 280 130 0 chr5 133182593 133182693 -66447457 - MER81 DNA DNA 0 114 2 534 343 28 36 chr5 133182808 133183059 -66447091 - MLT1K LTR MaLR -325 263 15 1132 174 108 0 chr5 133183642 133183855 -66446295 + AluJb SINE Alu 63 298 -14 350 271 69 105 chr5 133184270 133184517 -66445633 + MLT1J LTR MaLR 156 387 -124 2881 7 0 0 chr5 133184517 133184822 -66445328 + AluY SINE Alu 1 305 -6 350 271 69 105 chr5 133184822 133184936 -66445214 + MLT1J LTR MaLR 387 504 -7 1742 140 9 70 chr5 133184957 133185272 -66444878 - AluJb SINE Alu -15 297 2 1988 121 16 46 chr5 133185477 133185783 -66444367 + AluSx SINE Alu 1 297 -15 644 289 186 25 chr5 133186026 133186348 -66443802 - MLT1J2 LTR MaLR -37 409 36 1309 196 92 19 chr5 133186366 133186683 -66443467 - MLT1F LTR MaLR -4 538 199 239 135 0 0 chr5 133186686 133186723 -66443427 - MLT1A1 LTR MaLR -3 362 326 1137 158 48 24 chr5 133186723 133186932 -66443218 + AluJb SINE Alu 86 299 -13 1957 161 18 9 chr5 133186932 133187262 -66442888 - MLT1A1 LTR MaLR -32 333 1 618 257 98 16 chr5 133187262 133187444 -66442706 - MLT1F LTR MaLR -345 197 1 2134 96 43 0 chr5 133187722 133188002 -66442148 + AluSp SINE Alu 1 292 -21 24 32 0 0 chr5 133188194 133188225 -66441925 + AT_rich Low_complexity Low_complexity 1 31 0 2018 124 28 0 chr5 133188341 133188623 -66441527 + AluSx SINE Alu 17 306 -6 21 0 0 0 chr5 133188655 133188676 -66441474 + AT_rich Low_complexity Low_complexity 1 21 0 2190 101 0 16 chr5 133188751 133189059 -66441091 + AluSx SINE Alu 1 303 -9 277 242 55 66 chr5 133189086 133189177 -66440973 + HAL1 LINE L1 321 410 -2097 1763 166 3 14 chr5 133190294 133190589 -66439561 - AluJb SINE Alu -20 292 1 1735 142 58 42 chr5 133191156 133191486 -66438664 + MER47A DNA MER2_type 31 365 -1 2297 84 30 0 chr5 133191758 133192056 -66438094 + AluSp SINE Alu 1 307 -6 1481 117 56 28 chr5 133192231 133192480 -66437670 + Tigger2a DNA MER2_type 1 256 -178 2271 72 21 0 chr5 133192480 133192771 -66437379 + AluY SINE Alu 1 297 -14 570 180 10 0 chr5 133192774 133192874 -66437276 + L1ME LINE L1 5485 5585 -581 210 279 73 0 chr5 133193176 133193244 -66436906 - L2 LINE L2 -9 3304 3232 2330 93 3 0 chr5 133193281 133193571 -66436579 - AluSx SINE Alu -19 293 3 182 357 0 0 chr5 133193704 133193760 -66436390 - L2 LINE L2 -236 3036 2981 186 189 0 0 chr5 133194928 133194965 -66435185 + G-rich Low_complexity Low_complexity 3 39 0 25 31 0 0 chr5 133195285 133195317 -66434833 + GC_rich Low_complexity Low_complexity 1 32 0 791 175 0 7 chr5 133196104 133196247 -66433903 + MER5B DNA MER1_type 1 142 -36 188 231 324 29 chr5 133196260 133196498 -66433652 + L2 LINE L2 1650 1957 -1357 2105 115 0 0 chr5 133196539 133196818 -66433332 - AluSx SINE Alu -19 293 15 478 187 0 0 chr5 133196909 133197000 -66433150 + L1MC4 LINE L1 7685 7775 -267 491 188 31 0 chr5 133197027 133197123 -66433027 - MER5A DNA MER1_type -90 99 1 1084 168 41 45 chr5 133197123 133197367 -66432783 + L1MC4 LINE L1 7800 8042 0 1041 280 148 34 chr5 133197405 133198019 -66432131 + L2 LINE L2 2186 2869 -445 1280 148 7 92 chr5 133198049 133198288 -66431862 + MLT1D LTR MaLR 28 243 -262 2126 107 21 0 chr5 133198288 133198577 -66431573 + AluSg SINE Alu 1 295 -15 1280 148 7 92 chr5 133198577 133198608 -66431542 + MLT1D LTR MaLR 243 275 -230 2093 102 0 70 chr5 133198611 133198953 -66431197 + AluYb8 SINE Alu 1 318 0 1745 184 98 25 chr5 133198990 133199386 -66430764 - MLT1D LTR MaLR -80 425 1 683 244 175 50 chr5 133199466 133199969 -66430181 + LTR24B LTR ERV1 4 569 -7 230 283 96 36 chr5 133199970 133200136 -66430014 + L3 LINE CR1 1113 1288 -289 252 246 16 0 chr5 133200822 133200883 -66429267 + MIR SINE MIR 50 111 -151 2279 106 0 0 chr5 133202571 133202872 -66427278 + AluSq SINE Alu 1 301 -12 1025 134 0 0 chr5 133202873 133203015 -66427135 + MLT1A1 LTR MaLR 224 365 0 22 70 0 0 chr5 133203546 133203589 -66426561 + AT_rich Low_complexity Low_complexity 1 43 0 543 295 45 45 chr5 133203688 133203976 -66426174 - L2 LINE L2 0 3313 3026 1300 141 0 5 chr5 133203990 133204182 -66425968 + AluSx SINE Alu 1 191 -121 830 163 0 0 chr5 133204182 133204317 -66425833 + AluY SINE Alu 57 191 -120 316 339 63 8 chr5 133205957 133206084 -66424066 - L2 LINE L2 0 3313 3180 280 327 67 69 chr5 133206077 133206441 -66423709 - L2 LINE L2 -411 2903 2539 * 1884 160 7 3 chr5 133206441 133206575 -66423575 + AluSx SINE Alu 1 133 -179 2099 103 38 0 chr5 133206575 133206866 -66423284 + AluSp SINE Alu 1 302 -11 1884 160 7 3 chr5 133206866 133207031 -66423119 + AluSx SINE Alu 133 301 -11 280 327 67 69 chr5 133207031 133207057 -66423093 - L2 LINE L2 -775 2539 2514 186 299 52 82 chr5 133208283 133208417 -66421733 - L2 LINE L2 -219 3053 2924 332 299 36 42 chr5 133208464 133208631 -66421519 - MIR SINE MIR 0 262 97 254 374 118 5 chr5 133208737 133208924 -66421226 - L2 LINE L2 -557 2757 2550 2499 93 0 0 chr5 133209051 133209361 -66420789 - AluSx SINE Alu -2 310 1 1905 151 20 0 chr5 133210600 133210892 -66419258 + AluJb SINE Alu 1 298 -14 242 243 126 39 chr5 133211459 133211562 -66418588 + MIR SINE MIR 38 149 -113 1445 136 5 9 chr5 133211570 133211783 -66418367 + AluSx SINE Alu 44 255 -57 261 123 0 70 chr5 133211833 133211890 -66418260 + AluSp/q SINE Alu 251 303 0 240 35 0 0 chr5 133213173 133213202 -66416948 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 433 310 19 13 chr5 133214180 133214338 -66415812 + MER5A DNA MER1_type 31 189 0 21 0 0 0 chr5 133214427 133214448 -66415702 + AT_rich Low_complexity Low_complexity 1 21 0 1855 148 17 0 chr5 133215278 133215568 -66414582 + AluJo SINE Alu 1 295 -17 957 197 49 45 chr5 133217013 133217164 -66412986 - MER58A DNA MER1_type -2196 224 70 2418 38 0 67 chr5 133217164 133217480 -66412670 - AluY SINE Alu -16 295 1 957 197 49 45 chr5 133217480 133217551 -66412599 - MER58A DNA MER1_type -2350 70 1 783 230 9 45 chr5 133217567 133217789 -66412361 - MER58C DNA MER1_type -1 214 1 936 160 0 0 chr5 133218055 133218199 -66411951 + FAM SINE Alu 28 171 -14 2159 108 13 16 chr5 133219739 133220045 -66410105 - AluSx SINE Alu -7 305 1 2289 100 0 3 chr5 133221055 133221355 -66408795 + AluSp SINE Alu 1 299 -14 1800 178 0 16 chr5 133221387 133221690 -66408460 - AluJo SINE Alu -14 298 1 1679 185 21 3 chr5 133221704 133221990 -66408160 - AluJb SINE Alu -20 292 2 22 0 0 0 chr5 133222500 133222522 -66407628 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr5 133223817 133223856 -66406294 + AT_rich Low_complexity Low_complexity 1 39 0 189 0 0 0 chr5 133223909 133223930 -66406220 + (A)n Simple_repeat Simple_repeat 1 21 0 260 282 86 37 chr5 133226340 133226503 -66403647 - MLT1J LTR MaLR -310 201 31 2227 93 20 0 chr5 133226823 133227125 -66403025 + AluSq SINE Alu 3 310 -3 1022 229 107 28 chr5 133227200 133227615 -66402535 + MLT1C LTR MaLR 11 467 0 396 240 116 1 chr5 133227768 133227919 -66402231 - L1P4 LINE L1 -658 5507 5333 1301 239 90 67 chr5 133227933 133228088 -66402062 - L1M4 LINE L1 -1794 4352 4202 1953 85 3 32 chr5 133228088 133228397 -66401753 - AluY SINE Alu 0 311 31 1301 239 90 67 chr5 133228397 133228465 -66401685 - L1M4 LINE L1 -1944 4202 4137 1652 156 74 11 chr5 133228465 133228735 -66401415 + AluJb SINE Alu 1 287 -25 1301 239 90 67 chr5 133228735 133229095 -66401055 - L1M4 LINE L1 -2009 4137 3745 2410 81 0 3 chr5 133229095 133229404 -66400746 - AluY SINE Alu -3 308 1 1301 239 90 67 chr5 133229404 133229575 -66400575 - L1M4 LINE L1 -2401 3745 3579 794 287 22 25 chr5 133229575 133229899 -66400251 - L1MEc LINE L1 -6054 342 20 556 289 21 18 chr5 133229890 133229926 -66400224 + L1M4 LINE L1 2541 2575 -3571 * 423 0 0 0 chr5 133229926 133229973 -66400177 + (CA)n Simple_repeat Simple_repeat 1 47 0 556 289 21 18 chr5 133229973 133230216 -66399934 + L1M4 LINE L1 2575 2821 -3325 499 101 0 0 chr5 133230316 133230385 -66399765 + AluSc SINE Alu 131 199 -110 1348 185 70 26 chr5 133230493 133230763 -66399387 - AluJo SINE Alu -30 282 1 209 184 37 0 chr5 133230775 133230884 -66399266 + (TA)n Simple_repeat Simple_repeat 1 113 0 226 292 0 0 chr5 133230885 133230974 -66399176 - L1MC4 LINE L1 -1340 6702 6614 246 192 0 0 chr5 133230976 133231028 -66399122 + (TA)n Simple_repeat Simple_repeat 2 53 0 2053 101 0 0 chr5 133231038 133231305 -66398845 - AluY SINE Alu 0 311 45 454 265 65 0 chr5 133231360 133231545 -66398605 + L1M4 LINE L1 3380 3576 -2570 2111 104 0 27 chr5 133231583 133231882 -66398268 - AluSx SINE Alu -2 310 20 235 292 88 0 chr5 133232047 133232184 -66397966 + L1M LINE L1 5257 5405 -759 479 247 116 55 chr5 133232810 133233199 -66396951 - L1ME LINE L1 -666 5498 5135 2190 129 0 0 chr5 133233199 133233493 -66396657 - AluSx SINE Alu -18 294 1 479 247 116 55 chr5 133233493 133234215 -66395935 - L1ME LINE L1 -1029 5135 4262 1265 177 117 23 chr5 133234215 133234481 -66395669 - AluJb SINE Alu -19 293 3 479 247 116 55 chr5 133234481 133234905 -66395245 - L1ME LINE L1 -1902 4262 3866 759 242 106 57 chr5 133234907 133235383 -66394767 - MLT1G1 LTR MaLR 0 595 2 1034 250 58 41 chr5 133235390 133235754 -66394396 + MLT1E LTR MaLR 42 411 -182 45 75 0 0 chr5 133235959 133236053 -66394097 + AT_rich Low_complexity Low_complexity 1 94 0 1638 161 11 4 chr5 133236104 133236371 -66393779 + AluJb SINE Alu 19 287 -25 1870 159 7 0 chr5 133236392 133236681 -66393469 + AluJb SINE Alu 1 291 -21 1564 186 36 74 chr5 133236681 133237288 -66392862 + L1MB2 LINE L1 5323 5858 -454 2503 78 13 0 chr5 133237314 133237623 -66392527 - AluSp SINE Alu 0 313 1 2329 93 0 10 chr5 133237634 133237936 -66392214 - AluSx SINE Alu -13 299 1 4598 116 69 38 chr5 133237948 133238407 -66391743 - L1MA1 LINE L1 0 6302 5859 2046 136 13 3 chr5 133238407 133238708 -66391442 - AluJb SINE Alu -8 304 1 4598 116 69 38 chr5 133238708 133239282 -66390868 - L1MA1 LINE L1 -443 5859 5305 2507 57 0 3 chr5 133239282 133239579 -66390571 - AluY SINE Alu -15 296 1 4598 116 69 38 chr5 133239579 133239615 -66390535 - L1MA1 LINE L1 -997 5305 5272 2182 111 0 0 chr5 133239615 133239917 -66390233 - AluSc SINE Alu 0 302 1 4598 116 69 38 chr5 133239917 133240458 -66389692 - L1MA1 LINE L1 -1030 5272 4592 1214 101 63 164 chr5 133240457 133240767 -66389383 + L1MB2 LINE L1 5842 6182 11 * 1962 168 0 0 chr5 133240767 133241065 -66389085 + AluSx SINE Alu 3 300 -12 1602 163 38 21 chr5 133241065 133241354 -66388796 + AluJo SINE Alu 1 294 -18 1214 101 63 164 chr5 133241354 133241409 -66388741 + L1MB2 LINE L1 6112 6171 0 2350 87 0 3 chr5 133242856 133243156 -66386994 - AluSc SINE Alu -10 299 1 357 308 26 0 chr5 133243296 133243413 -66386737 - MIR SINE MIR -73 189 70 5857 189 28 30 chr5 133244853 133246406 -66383744 - L1MB2 LINE L1 -10 6397 4859 748 188 0 0 chr5 133246406 133246539 -66383611 - FLAM_C SINE Alu 0 133 1 5857 189 28 30 chr5 133246539 133247437 -66382713 - L1MB2 LINE L1 -1548 4859 3961 1508 219 99 43 chr5 133247446 133247850 -66382300 - L1MB2 LINE L1 -4516 1787 1407 2199 75 20 20 chr5 133247850 133248142 -66382008 + AluSc SINE Alu 1 292 -17 1508 219 99 43 chr5 133248142 133248245 -66381905 - L1MB2 LINE L1 -4896 1407 1311 2076 138 3 3 chr5 133248245 133248542 -66381608 - AluSx SINE Alu -15 297 1 1508 219 99 43 chr5 133248542 133248815 -66381335 - L1MB2 LINE L1 -4992 1311 600 508 301 38 58 chr5 133248983 133249382 -66380768 - L1M3d LINE L1 -5500 391 1 350 303 82 53 chr5 133249464 133249672 -66380478 - HAL1 LINE L1 -43 2464 2251 242 286 0 16 chr5 133250052 133250115 -66380035 - L2 LINE L2 -17 3296 3235 1876 121 197 43 chr5 133250211 133250390 -66379760 + MSTA LTR MaLR 1 151 -277 2178 119 7 0 chr5 133250390 133250685 -66379465 + AluSx SINE Alu 1 297 -15 1876 121 197 43 chr5 133250685 133250876 -66379274 + MSTA LTR MaLR 151 428 0 576 219 200 58 chr5 133250899 133251159 -66378991 + L2 LINE L2 3014 3310 -3 423 276 8 0 chr5 133251385 133251519 -66378631 - HAL1 LINE L1 -873 1634 1500 2214 115 0 0 chr5 133251789 133252085 -66378065 - AluSg SINE Alu -14 296 1 713 172 8 23 chr5 133252091 133252219 -66377931 - FLAM_A SINE Alu -7 126 1 557 152 0 71 chr5 133253452 133253564 -66376586 - FRAM SINE Alu -17 159 56 721 215 21 11 chr5 133254312 133254503 -66375647 - MER20 DNA MER1_type -26 193 1 415 219 98 8 chr5 133254546 133254669 -66375481 + MER3 DNA MER1_type 23 156 -53 546 175 117 0 chr5 133254770 133254873 -66375277 - AluSg SINE Alu -194 116 2 234 0 0 0 chr5 133255973 133255999 -66374151 + (A)n Simple_repeat Simple_repeat 1 26 0 2174 111 0 0 chr5 133258140 133258428 -66371722 - AluSx SINE Alu -24 288 1 26 50 0 0 chr5 133258618 133258658 -66371492 + AT_rich Low_complexity Low_complexity 1 40 0 2089 99 42 0 chr5 133259131 133259414 -66370736 - AluSx SINE Alu -17 295 1 299 280 60 50 chr5 133259612 133259751 -66370399 + MIR SINE MIR 37 176 -41 1603 157 62 11 chr5 133260681 133260955 -66369195 + AluJb SINE Alu 1 288 -24 2125 100 14 3 chr5 133261522 133261811 -66368339 + AluSx SINE Alu 1 292 -20 1782 179 0 10 chr5 133262254 133262550 -66367600 - AluSx SINE Alu -19 293 1 1835 116 49 0 chr5 133263463 133263747 -66366403 + MER1B DNA MER1_type 42 339 0 821 131 31 8 chr5 133264886 133265016 -66365134 - FLAM_A SINE Alu 0 133 1 366 176 14 14 chr5 133264966 133265040 -66365110 - AluJb SINE Alu -115 187 114 333 272 128 44 chr5 133265700 133265950 -66364200 - HAL1 LINE L1 -1122 1385 1115 771 256 5 35 chr5 133265963 133266162 -66363988 - MER58A DNA MER1_type -29 195 3 261 362 130 30 chr5 133267818 133268195 -66361955 - L2 LINE L2 -380 2934 2507 2348 88 7 0 chr5 133268195 133268503 -66361647 + AluSq SINE Alu 1 310 -3 261 362 130 30 chr5 133268503 133268556 -66361594 - L2 LINE L2 -807 2507 2461 544 324 117 25 chr5 133268698 133269219 -66360931 - L2 LINE L2 -1204 2110 1542 22 56 0 0 chr5 133269258 133269294 -66360856 + AT_rich Low_complexity Low_complexity 1 36 0 1072 117 0 0 chr5 133269369 133269506 -66360644 + AluSx SINE Alu 1 137 -175 1066 108 32 21 chr5 133269508 133269694 -66360456 + L1PB2 LINE L1 5956 6143 -8 1155 109 0 71 chr5 133269717 133269901 -66360249 + AluSx SINE Alu 127 297 -13 2119 201 99 6 chr5 133270781 133271314 -66358836 + MER119 DNA MER1_type 1 583 0 236 156 89 0 chr5 133271815 133271860 -66358290 + L2 LINE L2 3264 3312 -1 757 247 17 28 chr5 133272125 133272303 -66357847 - MER5A DNA MER1_type 0 189 14 4357 108 20 27 chr5 133272323 133272346 -66357804 + L1PA15 LINE L1 5462 5484 -681 1995 123 20 3 chr5 133272346 133272639 -66357511 + AluSx SINE Alu 1 298 -14 4357 108 20 27 chr5 133272639 133273321 -66356829 + L1PA15 LINE L1 5484 6162 -3 223 281 0 0 chr5 133273363 133273420 -66356730 - MIR SINE MIR -20 242 186 2167 117 7 7 chr5 133273559 133273859 -66356291 - AluSx SINE Alu -12 300 1 185 291 73 0 chr5 133274934 133274989 -66355161 - MIR SINE MIR -90 118 60 249 208 56 14 chr5 133275104 133275176 -66354974 - HAL1 LINE L1 -355 2152 2078 1772 99 56 0 chr5 133275266 133275518 -66354632 - AluSg SINE Alu -9 301 36 189 0 0 0 chr5 133275678 133275699 -66354451 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 638 269 134 62 chr5 133275743 133276422 -66353728 - HAL1 LINE L1 -1199 1308 581 445 214 143 97 chr5 133276892 133277088 -66353062 - MIR SINE MIR -20 242 38 2185 81 10 20 chr5 133277089 133277387 -66352763 - AluY SINE Alu -16 295 1 772 150 0 50 chr5 133279193 133279333 -66350817 + FLAM_C SINE Alu 1 133 0 24 0 0 0 chr5 133279488 133279512 -66350638 + AT_rich Low_complexity Low_complexity 1 24 0 393 284 74 14 chr5 133279656 133279804 -66350346 + Charlie7 DNA MER1_type 1 157 -2455 766 284 81 21 chr5 133280208 133280680 -66349470 + L1ME3A LINE L1 5463 5962 -208 279 211 29 96 chr5 133280736 133280840 -66349310 + L1ME3A LINE L1 5962 6058 -112 814 184 61 20 chr5 133280918 133281163 -66348987 + L1MC5 LINE L1 7653 7907 -54 301 250 68 64 chr5 133281233 133281469 -66348681 + L1ME LINE L1 4578 4814 -1332 2450 76 3 0 chr5 133281539 133281843 -66348307 - AluY SINE Alu -6 305 1 806 248 80 69 chr5 133282138 133282574 -66347576 + L1ME LINE L1 5318 5758 -412 272 174 12 35 chr5 133282629 133282715 -66347435 + (TA)n Simple_repeat Simple_repeat 2 85 0 28 0 0 0 chr5 133282750 133282778 -66347372 + AT_rich Low_complexity Low_complexity 1 28 0 1837 166 3 14 chr5 133282778 133283073 -66347077 - AluJb SINE Alu -20 292 1 2286 84 10 0 chr5 133283818 133284114 -66346036 - AluY SINE Alu -12 299 1 2363 82 0 16 chr5 133284503 133284807 -66345343 - AluSx SINE Alu -13 299 1 866 293 144 0 chr5 133285264 133285749 -66344401 + L2 LINE L2 2729 3266 -47 2205 113 3 25 chr5 133285819 133286138 -66344012 + AluSx SINE Alu 1 312 0 2290 103 0 0 chr5 133286139 133286440 -66343710 + AluSq SINE Alu 1 301 -12 1900 145 14 0 chr5 133286660 133286950 -66343200 - AluSx SINE Alu -18 294 1 3570 122 71 79 chr5 133287671 133288447 -66341703 + LTR1 LTR ERV1 16 785 0 432 143 0 0 chr5 133288636 133288713 -66341437 + Alu SINE Alu 234 310 -1 566 120 0 0 chr5 133288954 133289029 -66341121 + AluS SINE Alu 5 79 -234 22 0 0 0 chr5 133289037 133289059 -66341091 + AT_rich Low_complexity Low_complexity 1 22 0 2336 89 3 0 chr5 133289395 133289686 -66340464 + AluSq SINE Alu 1 292 -21 348 204 194 0 chr5 133289787 133289890 -66340260 + MIR SINE MIR 70 192 -70 226 264 28 38 chr5 133289907 133290013 -66340137 + 7SK RNA RNA 2 106 -87 273 229 162 38 chr5 133290734 133290839 -66339311 - L2 LINE L2 -4 3309 3192 504 345 161 13 chr5 133291577 133292104 -66338046 - L2 LINE L2 -988 2326 1722 1712 173 43 0 chr5 133292899 133293177 -66336973 - AluJo SINE Alu -22 290 1 183 80 0 0 chr5 133294264 133294289 -66335861 + (TCCC)n Simple_repeat Simple_repeat 4 28 0 1366 181 0 4 chr5 133294297 133294523 -66335627 - AluJb SINE Alu -1 311 87 255 264 55 33 chr5 133294526 133294617 -66335533 + MIR SINE MIR 118 210 -52 843 200 17 11 chr5 133294639 133294819 -66335331 - MER46A DNA MER2_type 0 236 56 644 213 8 8 chr5 133294822 133294944 -66335206 + FLAM_A SINE Alu 1 122 -11 35 0 0 0 chr5 133294945 133294980 -66335170 + AT_rich Low_complexity Low_complexity 1 35 0 314 140 18 0 chr5 133294981 133295038 -66335112 - MER46A DNA MER2_type -178 58 1 321 261 68 43 chr5 133295336 133295497 -66334653 + L1ME3A LINE L1 5918 6082 -88 1697 193 7 0 chr5 133295542 133295846 -66334304 - AluJb SINE Alu 0 306 1 2065 126 0 20 chr5 133295879 133296180 -66333970 - AluSx SINE Alu -17 295 1 1855 182 0 0 chr5 133296222 133296519 -66333631 + AluSx SINE Alu 1 297 -15 1574 202 3 7 chr5 133296535 133296827 -66333323 + AluJb SINE Alu 1 291 -21 1389 226 116 29 chr5 133297309 133298249 -66331901 - L1ME1 LINE L1 -217 5949 5093 2438 77 0 0 chr5 133298249 133298549 -66331601 + AluY SINE Alu 1 300 -11 1785 154 3 18 chr5 133298553 133298866 -66331284 + AluJb SINE Alu 1 309 0 1389 226 116 29 chr5 133298866 133299116 -66331034 - L1ME1 LINE L1 -1075 5091 4578 261 0 0 0 chr5 133299166 133299195 -66330955 + (CA)n Simple_repeat Simple_repeat 2 30 0 28 29 0 0 chr5 133299452 133299487 -66330663 + AT_rich Low_complexity Low_complexity 1 35 0 583 252 0 0 chr5 133300182 133300301 -66329849 - Tigger2 DNA MER2_type 0 2718 2600 2752 55 11 0 chr5 133300302 133300650 -66329500 - L1PA5 LINE L1 -2 6152 5801 36981 68 11 2 chr5 133300653 133305753 -66324397 - L1PA5 LINE L1 -996 5150 10 284 267 12 12 chr5 133305989 133306075 -66324075 + CT-rich Low_complexity Low_complexity 1 86 0 2249 102 3 3 chr5 133306075 133306370 -66323780 - AluSp SINE Alu -16 297 3 257 296 68 23 chr5 133306472 133306648 -66323502 + L2 LINE L2 2218 2401 -913 1833 157 0 0 chr5 133306824 133307092 -66323058 + AluSx SINE Alu 35 302 -10 2164 107 7 7 chr5 133307117 133307415 -66322735 + AluSg SINE Alu 3 300 -10 229 236 50 93 chr5 133307433 133307509 -66322641 - HAL1 LINE L1 -82 2425 2356 2224 113 0 0 chr5 133307509 133307801 -66322349 - AluSc SINE Alu -16 293 2 229 236 50 93 chr5 133307801 133307864 -66322286 - HAL1 LINE L1 -151 2356 2292 899 100 0 8 chr5 133307890 133308010 -66322140 - AluSg/x SINE Alu -14 296 178 312 219 61 24 chr5 133308012 133308094 -66322056 - HAL1 LINE L1 -421 2086 2002 927 265 101 26 chr5 133308210 133308637 -66321513 - HAL1 LINE L1 -731 1776 1318 226 222 0 0 chr5 133308638 133308683 -66321467 + MIR SINE MIR 144 188 -74 1815 170 28 0 chr5 133308825 133309113 -66321037 + AluSx SINE Alu 1 296 -16 318 237 0 0 chr5 133309214 133309290 -66320860 - L1MC4 LINE L1 -5 8037 7962 485 241 0 9 chr5 133309313 133309421 -66320729 - Tigger7 DNA MER2_type 0 2587 2481 * 1070 212 44 0 chr5 133309419 133309645 -66320505 - Tigger7 DNA MER2_type -497 236 1 303 257 62 0 chr5 133309648 133309776 -66320374 - L1MEd LINE L1 -4614 1768 1582 472 311 111 70 chr5 133309892 133309966 -66320184 - L1MEd LINE L1 -5128 1244 1175 2213 129 0 10 chr5 133309966 133310276 -66319874 - AluSx SINE Alu -5 307 1 472 311 111 70 chr5 133310276 133310525 -66319625 - L1MEd LINE L1 -5197 1175 892 2335 103 0 6 chr5 133310525 133310836 -66319314 - AluSc SINE Alu 0 309 1 472 311 111 70 chr5 133310836 133310997 -66319153 - L1MEd LINE L1 -5480 892 739 769 275 33 14 chr5 133311011 133311222 -66318928 + MIR SINE MIR 2 216 -46 33967 42 4 1 chr5 133311698 133317835 -66312315 + L1PA4 LINE L1 1 6155 0 1088 185 22 36 chr5 133318718 133318763 -66311387 - MER20 DNA MER1_type 0 219 175 1671 157 6 64 chr5 133318763 133319076 -66311074 - AluJb SINE Alu -17 295 1 1088 185 22 36 chr5 133319076 133319252 -66310898 - MER20 DNA MER1_type -44 175 1 1186 253 73 0 chr5 133319570 133319871 -66310279 + MLT1H1 LTR MaLR 232 554 -1 2416 101 0 0 chr5 133319873 133320181 -66309969 - AluSq SINE Alu -5 308 1 259 214 0 0 chr5 133321543 133321598 -66308552 - MER46C DNA MER2_type -4 334 280 296 143 0 18 chr5 133321598 133321654 -66308496 + MSTD LTR MaLR 1 55 -341 807 169 164 15 chr5 133321698 133321899 -66308251 + MSTD LTR MaLR 166 396 0 699 261 87 23 chr5 133321902 133322166 -66307984 - MER46C DNA MER2_type -57 281 1 242 279 48 0 chr5 133322170 133322274 -66307876 + HAL1 LINE L1 1550 1658 -849 624 171 57 16 chr5 133322867 133322990 -66307160 + FLAM_C SINE Alu 1 128 -5 305 347 56 19 chr5 133323003 133323219 -66306931 + L1M4 LINE L1 2346 2569 -3577 300 292 42 12 chr5 133323258 133323426 -66306724 + L1M4 LINE L1 2676 2848 -3298 1954 63 4 0 chr5 133323430 133323668 -66306482 + AluY SINE Alu 59 297 -14 1782 179 0 10 chr5 133324223 133324519 -66305631 + AluSx SINE Alu 1 293 -19 2125 100 14 3 chr5 133324962 133325251 -66304899 - AluSx SINE Alu -20 292 1 1603 157 62 11 chr5 133325818 133326092 -66304058 - AluJb SINE Alu -24 288 1 299 280 60 50 chr5 133327022 133327161 -66302989 - MIR SINE MIR -41 167 37 2089 99 42 0 chr5 133327359 133327642 -66302508 + AluSx SINE Alu 1 295 -17 26 50 0 0 chr5 133328116 133328156 -66301994 + AT_rich Low_complexity Low_complexity 1 40 0 2174 111 0 0 chr5 133328346 133328634 -66301516 + AluSx SINE Alu 1 288 -24 201 39 0 0 chr5 133330774 133330800 -66299350 + (T)n Simple_repeat Simple_repeat 1 26 0 546 175 117 0 chr5 133331900 133332003 -66298147 + AluSg SINE Alu 2 116 -194 415 219 98 8 chr5 133332104 133332227 -66297923 - MER3 DNA MER1_type -53 156 23 721 215 21 11 chr5 133332270 133332461 -66297689 + MER20 DNA MER1_type 1 193 -26 557 152 0 71 chr5 133333210 133333322 -66296828 + FRAM SINE Alu 56 159 -17 713 172 8 23 chr5 133334555 133334683 -66295467 + FLAM_A SINE Alu 1 126 -7 2214 115 0 0 chr5 133334689 133334985 -66295165 + AluSg SINE Alu 1 296 -14 423 276 8 0 chr5 133335255 133335389 -66294761 + HAL1 LINE L1 1500 1634 -873 576 219 200 58 chr5 133335615 133335875 -66294275 - L2 LINE L2 -3 3310 3014 1876 121 197 43 chr5 133335898 133336089 -66294061 - MSTA LTR MaLR 0 428 268 2178 119 7 0 chr5 133336089 133336384 -66293766 - AluSx SINE Alu -15 297 1 1876 121 197 43 chr5 133336384 133336563 -66293587 - MSTA LTR MaLR -160 268 1 242 286 0 16 chr5 133336659 133336722 -66293428 + L2 LINE L2 3235 3296 -17 350 303 82 53 chr5 133337102 133337310 -66292840 + HAL1 LINE L1 2251 2464 -43 508 301 38 58 chr5 133337392 133337791 -66292359 + L1M3d LINE L1 1 391 -5500 1508 245 84 38 chr5 133337959 133338232 -66291918 + L1MB2 LINE L1 600 859 -5444 2076 138 3 3 chr5 133338232 133338529 -66291621 + AluSx SINE Alu 1 297 -15 1508 245 84 38 chr5 133338529 133338632 -66291518 + L1MB2 LINE L1 859 956 -5347 2199 75 20 20 chr5 133338632 133338924 -66291226 - AluSc SINE Alu -17 292 1 1508 245 84 38 chr5 133338924 133339328 -66290822 + L1MB2 LINE L1 956 1787 -4516 5857 189 28 30 chr5 133339337 133340235 -66289915 + L1MB2 LINE L1 3961 4859 -1548 748 188 0 0 chr5 133340235 133340368 -66289782 + FLAM_C SINE Alu 1 133 0 5857 189 28 30 chr5 133340368 133341921 -66288229 + L1MB2 LINE L1 4859 6397 -10 357 308 26 0 chr5 133343361 133343478 -66286672 + MIR SINE MIR 70 189 -73 2350 87 0 3 chr5 133343618 133343918 -66286232 + AluSc SINE Alu 1 299 -10 1214 101 63 164 chr5 133345365 133345420 -66284730 - L1MB2 LINE L1 0 6171 6112 1602 163 38 21 chr5 133345420 133345709 -66284441 - AluJo SINE Alu -18 294 1 1962 168 0 0 chr5 133345709 133346007 -66284143 - AluSx SINE Alu -12 300 3 1214 101 63 164 chr5 133346007 133346317 -66283833 - L1MB2 LINE L1 -57 6114 5842 * 4598 116 69 38 chr5 133346316 133346857 -66283293 + L1MA1 LINE L1 4592 5114 -1188 2183 111 0 0 chr5 133346857 133347159 -66282991 + AluSc SINE Alu 1 302 0 4598 116 69 38 chr5 133347159 133347195 -66282955 + L1MA1 LINE L1 5114 5147 -1155 2507 57 0 3 chr5 133347195 133347492 -66282658 + AluY SINE Alu 1 296 -15 4598 116 69 38 chr5 133347492 133348066 -66282084 + L1MA1 LINE L1 5147 5701 -601 2046 136 13 3 chr5 133348066 133348367 -66281783 + AluJb SINE Alu 1 304 -8 4598 116 69 38 chr5 133348367 133348826 -66281324 + L1MA1 LINE L1 5701 6302 0 2329 93 0 10 chr5 133348838 133349140 -66281010 + AluSx SINE Alu 1 299 -13 2503 78 13 0 chr5 133349151 133349460 -66280690 + AluSp SINE Alu 1 313 0 1564 186 36 74 chr5 133349486 133350093 -66280057 - L1MB2 LINE L1 -454 5858 5323 1870 159 7 0 chr5 133350093 133350382 -66279768 - AluJb SINE Alu -21 291 1 1638 161 11 4 chr5 133350403 133350670 -66279480 - AluJb SINE Alu -25 287 19 45 75 0 0 chr5 133350721 133350815 -66279335 + AT_rich Low_complexity Low_complexity 1 94 0 1034 250 58 41 chr5 133351020 133351384 -66278766 - MLT1E LTR MaLR -182 411 42 759 242 106 57 chr5 133351391 133351867 -66278283 + MLT1G1 LTR MaLR 2 595 0 479 247 116 55 chr5 133351869 133352293 -66277857 + L1ME LINE L1 3866 4262 -1900 1265 177 117 23 chr5 133352293 133352559 -66277591 + AluJb SINE Alu 3 293 -19 479 247 116 55 chr5 133352559 133353281 -66276869 + L1ME LINE L1 4262 5135 -1027 2190 129 0 0 chr5 133353281 133353575 -66276575 + AluSx SINE Alu 1 294 -18 479 247 116 55 chr5 133353575 133353964 -66276186 + L1ME LINE L1 5135 5498 -664 235 292 88 0 chr5 133354590 133354727 -66275423 - L1M LINE L1 -759 5405 5257 2111 104 0 27 chr5 133354892 133355191 -66274959 + AluSx SINE Alu 20 310 -2 454 265 65 0 chr5 133355229 133355414 -66274736 - L1M4 LINE L1 -2570 3576 3380 2045 102 0 0 chr5 133355469 133355735 -66274415 + AluY SINE Alu 45 310 -1 291 175 0 0 chr5 133355735 133355792 -66274358 + (TA)n Simple_repeat Simple_repeat 1 57 0 226 292 0 0 chr5 133355794 133355883 -66274267 + L1MC4 LINE L1 6614 6702 -1340 209 184 37 0 chr5 133355884 133355993 -66274157 + (TA)n Simple_repeat Simple_repeat 1 113 0 1348 185 70 26 chr5 133356005 133356275 -66273875 + AluJo SINE Alu 1 282 -30 499 101 0 0 chr5 133356383 133356452 -66273698 - AluSc SINE Alu -110 199 131 556 289 21 18 chr5 133356552 133356795 -66273355 - L1M4 LINE L1 -3325 2821 2575 477 0 0 0 chr5 133356795 133356848 -66273302 + (TG)n Simple_repeat Simple_repeat 1 53 0 556 289 21 18 chr5 133356848 133356884 -66273266 - L1M4 LINE L1 -3571 2575 2541 * 794 287 22 25 chr5 133356875 133357199 -66272951 + L1MEc LINE L1 20 342 -6054 1301 239 90 67 chr5 133357199 133357370 -66272780 + L1M4 LINE L1 3579 3745 -2401 2410 81 0 3 chr5 133357370 133357679 -66272471 + AluY SINE Alu 1 308 -3 1301 239 90 67 chr5 133357679 133358039 -66272111 + L1M4 LINE L1 3745 4095 -2051 1652 156 74 11 chr5 133358039 133358309 -66271841 - AluJb SINE Alu -25 287 1 1301 239 90 67 chr5 133358309 133358377 -66271773 + L1M4 LINE L1 4095 4160 -1986 1953 85 3 32 chr5 133358377 133358686 -66271464 + AluY SINE Alu 31 311 0 1301 239 90 67 chr5 133358686 133358841 -66271309 + L1M4 LINE L1 4160 4352 -1794 396 240 116 1 chr5 133358855 133359006 -66271144 + L1P4 LINE L1 5333 5507 -658 1022 229 107 28 chr5 133359159 133359574 -66270576 - MLT1C LTR MaLR 0 467 11 2236 92 20 0 chr5 133359649 133359952 -66270198 - AluSq SINE Alu -2 311 3 260 282 86 37 chr5 133360272 133360435 -66269715 + MLT1J LTR MaLR 31 201 -310 189 0 0 0 chr5 133362845 133362866 -66267284 + (T)n Simple_repeat Simple_repeat 1 21 0 32 26 0 0 chr5 133362919 133362958 -66267192 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 133364253 133364275 -66265875 + AT_rich Low_complexity Low_complexity 1 22 0 1679 185 21 3 chr5 133364785 133365071 -66265079 + AluJb SINE Alu 2 292 -20 1800 178 0 16 chr5 133365085 133365388 -66264762 + AluJo SINE Alu 1 298 -14 2289 100 0 3 chr5 133365420 133365720 -66264430 - AluSp SINE Alu -14 299 1 2134 112 14 0 chr5 133366730 133367024 -66263126 + AluSx SINE Alu 1 298 -14 924 160 0 0 chr5 133368576 133368720 -66261430 - FAM SINE Alu -14 171 28 781 234 9 45 chr5 133368986 133369208 -66260942 + MER58C DNA MER1_type 1 214 -1 963 197 49 45 chr5 133369224 133369295 -66260855 + MER58A DNA MER1_type 1 70 -2350 2424 38 0 67 chr5 133369295 133369611 -66260539 + AluY SINE Alu 1 295 -16 963 197 49 45 chr5 133369611 133369762 -66260388 + MER58A DNA MER1_type 70 224 0 1832 148 17 0 chr5 133371207 133371497 -66258653 - AluJo SINE Alu -17 295 1 184 286 79 0 chr5 133371957 133372020 -66258130 + MIR SINE MIR 87 154 -108 21 0 0 0 chr5 133372327 133372348 -66257802 + AT_rich Low_complexity Low_complexity 1 21 0 502 310 19 13 chr5 133372437 133372595 -66257555 - MER5A DNA MER1_type 0 189 31 240 35 0 0 chr5 133373573 133373602 -66256548 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 275 176 0 0 chr5 133374891 133374942 -66255208 - AluSp/q SINE Alu -2 301 251 1429 136 5 9 chr5 133374992 133375205 -66254945 - AluSx SINE Alu -57 255 44 279 252 122 37 chr5 133375213 133375320 -66254830 - MIR SINE MIR -113 149 34 1875 151 20 0 chr5 133375883 133376175 -66253975 - AluJb SINE Alu -14 298 1 2458 93 0 0 chr5 133377414 133377724 -66252426 + AluSx SINE Alu 1 310 -2 250 361 208 7 chr5 133377770 133378039 -66252111 + L2 LINE L2 2435 2757 -557 375 299 36 42 chr5 133378145 133378312 -66251838 + MIR SINE MIR 97 262 0 230 299 52 82 chr5 133378359 133378493 -66251657 + L2 LINE L2 2924 3053 -219 405 325 67 69 chr5 133379719 133379745 -66250405 + L2 LINE L2 2514 2539 -775 1891 166 0 0 chr5 133379745 133379910 -66250240 - AluSx SINE Alu -11 301 134 2065 103 38 0 chr5 133379910 133380201 -66249949 - AluSp SINE Alu -11 302 1 1891 166 0 0 chr5 133380201 133380336 -66249814 - AluSx SINE Alu -177 135 1 405 325 67 69 chr5 133380336 133380700 -66249450 + L2 LINE L2 2539 2903 -411 364 339 63 8 chr5 133380693 133380820 -66249330 + L2 LINE L2 3180 3313 0 * 225 0 0 0 chr5 133382452 133382477 -66247673 + (TG)n Simple_repeat Simple_repeat 2 26 0 950 202 130 5 chr5 133382548 133382771 -66247379 - AluJo SINE Alu -19 293 43 409 256 0 0 chr5 133384759 133384849 -66245301 + HsTC2 DNA Tc2 29 118 -1780 1733 218 88 74 chr5 133384876 133385481 -66244669 + HsTC2 DNA Tc2 1286 1898 0 284 257 119 10 chr5 133386082 133386183 -66243967 + MIR3 SINE MIR 91 202 -6 26 50 0 0 chr5 133386456 133386496 -66243654 + AT_rich Low_complexity Low_complexity 1 40 0 511 291 25 6 chr5 133386569 133386727 -66243423 + MIR SINE MIR 102 262 0 1871 141 0 27 chr5 133388260 133388559 -66241591 + AluJb SINE Alu 1 291 -21 308 68 0 0 chr5 133388669 133388713 -66241437 - MADE1 DNA Mariner -36 44 1 2404 39 42 0 chr5 133388909 133389193 -66240957 + AluY SINE Alu 1 296 -15 1088 61 0 0 chr5 133389592 133389724 -66240426 - AluY SINE Alu -179 132 1 312 258 22 96 chr5 133389775 133389953 -66240197 + MIR SINE MIR 95 259 -3 885 198 0 30 chr5 133390406 133390573 -66239577 + FRAM SINE Alu 4 165 -1 248 274 0 0 chr5 133391399 133391483 -66238667 + L1MCc LINE L1 1385 1468 -4955 586 289 75 35 chr5 133391600 133392025 -66238125 + L1MCc LINE L1 2000 2441 -4681 2207 89 3 3 chr5 133392223 133392516 -66237634 - AluY SINE Alu -18 293 1 21 36 0 0 chr5 133393240 133393268 -66236882 + AT_rich Low_complexity Low_complexity 1 28 0 1986 145 0 29 chr5 133394018 133394329 -66235821 - AluSx SINE Alu -10 302 1 289 125 0 0 chr5 133394515 133394555 -66235595 + Tigger2 DNA MER2_type 31 70 -2648 275 207 103 0 chr5 133394556 133394614 -66235536 - MER2 DNA MER2_type 0 345 282 * 793 222 48 6 chr5 133394591 133394758 -66235392 - MER8 DNA MER2_type -62 177 4 716 320 90 53 chr5 133394774 133395102 -66235048 + L1M4 LINE L1 4126 4440 -1706 1843 154 47 22 chr5 133395102 133395466 -66234684 + THE1C LTR MaLR 1 373 -2 716 320 90 53 chr5 133395466 133395613 -66234537 + L1M4 LINE L1 4440 4580 -1566 2200 112 3 7 chr5 133395613 133395909 -66234241 - AluSg SINE Alu -13 297 3 716 320 90 53 chr5 133395909 133396276 -66233874 + L1M4 LINE L1 4580 5000 -1146 413 225 288 12 chr5 133396294 133396454 -66233696 - MIR SINE MIR -44 218 15 26 0 0 0 chr5 133396889 133396915 -66233235 + AT_rich Low_complexity Low_complexity 1 26 0 309 294 119 16 chr5 133397567 133397693 -66232457 - MIR SINE MIR -121 141 3 191 244 0 0 chr5 133398176 133398221 -66231929 + MIR SINE MIR 218 262 0 23 68 0 0 chr5 133399055 133399099 -66231051 + AT_rich Low_complexity Low_complexity 1 44 0 928 191 64 27 chr5 133399940 133400128 -66230022 - MIR SINE MIR -58 204 10 2285 110 0 0 chr5 133400255 133400554 -66229596 + AluSx SINE Alu 1 299 -13 22 0 0 0 chr5 133400616 133400638 -66229512 + AT_rich Low_complexity Low_complexity 1 22 0 906 289 48 36 chr5 133401447 133401886 -66228264 - L1ME4a LINE L1 -194 5927 5484 25 0 0 0 chr5 133402336 133402361 -66227789 + AT_rich Low_complexity Low_complexity 1 25 0 1840 160 3 7 chr5 133402470 133402758 -66227392 + AluJb SINE Alu 13 299 -13 207 0 0 0 chr5 133402904 133402927 -66227223 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2543 118 6 3 chr5 133403404 133403761 -66226389 + THE1B LTR MaLR 7 364 0 214 298 53 0 chr5 133404512 133404569 -66225581 + L2 LINE L2 3213 3272 0 1698 179 10 0 chr5 133404708 133404998 -66225152 + AluJb SINE Alu 1 293 -19 2427 68 0 16 chr5 133405004 133405313 -66224837 + AluY SINE Alu 1 304 -7 414 299 16 31 chr5 133405586 133405713 -66224437 - L2 LINE L2 -9 3304 3180 611 200 60 0 chr5 133405803 133405953 -66224197 - MER58 DNA MER1_type -1 2419 2261 25 31 0 0 chr5 133406304 133406336 -66223814 + AT_rich Low_complexity Low_complexity 1 32 0 388 214 101 0 chr5 133407305 133407394 -66222756 + LTR50 LTR ERVL 501 598 -197 289 176 153 53 chr5 133407978 133408109 -66222041 + LTR50 LTR ERVL 625 768 -27 2586 62 0 0 chr5 133409020 133409328 -66220822 - AluY SINE Alu -3 308 1 249 273 68 23 chr5 133410944 133411032 -66219118 + MIR SINE MIR 75 145 -63 1787 115 80 7 chr5 133411140 133411427 -66218723 + AluSx SINE Alu 1 308 -4 437 218 66 20 chr5 133412941 133413197 -66216953 - L1ME4a LINE L1 -1 6120 5678 808 89 0 104 chr5 133413267 133413402 -66216748 + AluSq/x SINE Alu 7 127 -185 1181 121 0 6 chr5 133413404 133413593 -66216557 - AluSg/x SINE Alu 0 313 126 1346 144 0 0 chr5 133413594 133413789 -66216361 - AluSx SINE Alu -117 195 1 306 178 0 136 chr5 133413942 133414060 -66216090 - L1ME4a LINE L1 -992 5367 5266 25 31 0 0 chr5 133415197 133415229 -66214921 + AT_rich Low_complexity Low_complexity 1 32 0 278 254 0 0 chr5 133415821 133415876 -66214274 - L2 LINE L2 -1 3271 3217 1069 184 124 28 chr5 133417098 133417315 -66212835 - MER8 DNA MER2_type 0 239 2 2220 108 0 0 chr5 133417450 133417736 -66212414 - AluSx SINE Alu -26 286 1 2215 95 24 7 chr5 133417886 133418182 -66211968 - AluSp SINE Alu -12 301 1 1873 144 0 16 chr5 133418183 133418488 -66211662 - AluJb SINE Alu -12 300 1 273 297 0 0 chr5 133419211 133419275 -66210875 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 1474 184 43 18 chr5 133419278 133419560 -66210590 - AluJo SINE Alu -23 289 1 219 364 84 7 chr5 133419697 133419851 -66210299 - L2 LINE L2 -187 3085 2920 2277 107 0 0 chr5 133420024 133420323 -66209827 + AluSx SINE Alu 1 299 -13 2347 71 17 3 chr5 133420776 133421070 -66209080 + AluY SINE Alu 1 298 -13 2266 92 34 0 chr5 133421180 133421472 -66208678 - AluSc SINE Alu -7 302 1 329 301 94 24 chr5 133421552 133421765 -66208385 + L1MC4a LINE L1 5622 5849 -1959 1835 161 7 3 chr5 133421899 133422184 -66207966 - AluJo SINE Alu -26 286 1 372 369 76 29 chr5 133422460 133422774 -66207376 - L1MDa LINE L1 -6210 330 2 364 290 279 30 chr5 133423381 133423678 -66206472 - HAL1 LINE L1 -1130 1377 1007 730 91 0 0 chr5 133423684 133423783 -66206367 - AluY SINE Alu -9 302 204 2049 76 150 193 chr5 133423982 133424639 -66205511 - LTR12 LTR ERV1 -133 2032 57 287 196 0 0 chr5 133424640 133424691 -66205459 - LTR30 LTR ERV1 -671 51 1 204 289 0 0 chr5 133425334 133425386 -66204764 - MIR SINE MIR -135 127 76 280 274 80 0 chr5 133426701 133426814 -66203336 + L1ME4a LINE L1 5971 6092 -29 400 332 76 49 chr5 133427210 133427617 -66202533 + HAL1 LINE L1 1152 1569 -938 589 216 60 8 chr5 133428133 133428267 -66201883 - MER20 DNA MER1_type -34 185 45 184 214 0 89 chr5 133428406 133428462 -66201688 - MER5A DNA MER1_type -129 60 10 * 186 216 0 149 chr5 133428452 133428484 -66201666 + MER5B DNA MER1_type 11 28 -150 2029 107 40 67 chr5 133428484 133428830 -66201320 + MER1B DNA MER1_type 1 337 0 186 216 0 149 chr5 133428830 133428871 -66201279 + MER5B DNA MER1_type 28 73 -105 2343 64 0 0 chr5 133430000 133430321 -66199829 - AluY SINE Alu 0 321 1 450 299 79 17 chr5 133431009 133431186 -66198964 - MIR SINE MIR -11 251 64 1995 105 7 14 chr5 133431968 133432307 -66197843 + AluSg SINE Alu 1 337 0 674 173 23 23 chr5 133433017 133433150 -66197000 + FLAM_A SINE Alu 1 133 0 4385 164 48 40 chr5 133433302 133434533 -66195617 - L1MB5 LINE L1 0 6174 4931 224 39 59 39 chr5 133435950 133436001 -66194149 + GA-rich Low_complexity Low_complexity 2 53 0 2229 107 0 7 chr5 133436254 133436564 -66193586 + AluSq SINE Alu 1 308 -5 2278 106 0 0 chr5 133436851 133437154 -66192996 - AluSg SINE Alu -7 303 1 21 0 0 0 chr5 133437155 133437176 -66192974 + AT_rich Low_complexity Low_complexity 1 21 0 323 348 87 43 chr5 133437642 133437849 -66192301 + L2 LINE L2 3056 3271 -1 315 125 0 0 chr5 133437929 133437977 -66192173 + AluSx SINE Alu 1 48 -254 * 351 175 0 0 chr5 133437973 133438030 -66192120 - AluS SINE Alu -246 57 1 1462 143 20 33 chr5 133438039 133438120 -66192030 + AluSx SINE Alu 58 138 -174 210 37 0 0 chr5 133438120 133438147 -66192003 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1462 143 20 33 chr5 133438147 133438310 -66191840 + AluSx SINE Alu 138 299 -13 2217 213 173 45 chr5 133438663 133439755 -66190395 + L1MC4 LINE L1 6463 7809 -233 2280 102 0 13 chr5 133439755 133440060 -66190090 - AluSx SINE Alu -11 301 1 2217 213 173 45 chr5 133440060 133440327 -66189823 + L1MC4 LINE L1 7809 8040 -2 238 229 219 0 chr5 133440774 133440870 -66189280 - MIR SINE MIR -42 220 104 2256 107 0 0 chr5 133441142 133441433 -66188717 + AluSg SINE Alu 4 294 -16 857 258 73 9 chr5 133442720 133442953 -66187197 + MIR SINE MIR 1 248 -14 1596 177 42 10 chr5 133443099 133443387 -66186763 - AluJo SINE Alu -15 297 1 515 239 28 0 chr5 133443610 133443719 -66186431 + L2 LINE L2 3151 3262 -10 21 36 0 0 chr5 133443817 133443845 -66186305 + AT_rich Low_complexity Low_complexity 1 28 0 346 260 79 8 chr5 133443992 133444119 -66186031 - L1ME4a LINE L1 -278 5843 5708 32 86 0 0 chr5 133444123 133444204 -66185946 + AT_rich Low_complexity Low_complexity 1 81 0 370 335 44 0 chr5 133444204 133444386 -66185764 - L1ME4a LINE L1 -400 5721 5532 21 36 0 0 chr5 133446174 133446202 -66183948 + AT_rich Low_complexity Low_complexity 1 28 0 2457 58 0 0 chr5 133446219 133446511 -66183639 + AluY SINE Alu 1 292 -19 1794 222 73 46 chr5 133446701 133447224 -66182926 + MLT1F LTR MaLR 1 537 -5 1588 186 3 38 chr5 133448439 133448757 -66181393 - AluJb SINE Alu -5 307 1 583 162 30 0 chr5 133449320 133449419 -66180731 - AluJb SINE Alu -3 309 208 1653 176 78 23 chr5 133449634 133449980 -66180170 + MLT1A1 LTR MaLR 1 365 0 1723 137 0 65 chr5 133450683 133450990 -66179160 + AluJb SINE Alu 1 287 -25 429 254 71 12 chr5 133451386 133451729 -66178421 + L1ME LINE L1 596 1049 -5034 1706 121 30 11 chr5 133453004 133453299 -66176851 - AluSx SINE Alu 0 342 43 1645 97 27 8 chr5 133453978 133454236 -66175914 + L1PA16 LINE L1 5895 6157 -9 387 0 0 0 chr5 133454738 133454781 -66175369 + (CA)n Simple_repeat Simple_repeat 2 44 0 23 68 0 0 chr5 133455110 133455154 -66174996 + AT_rich Low_complexity Low_complexity 1 44 0 205 200 47 47 chr5 133455230 133455315 -66174835 + T-rich Low_complexity Low_complexity 2 86 0 2289 85 7 0 chr5 133455357 133455652 -66174498 - AluSp SINE Alu -15 298 2 835 176 0 36 chr5 133455891 133456056 -66174094 + L1ME1 LINE L1 5903 6061 -105 1875 131 0 0 chr5 133456352 133456620 -66173530 - AluSx SINE Alu -5 307 40 1520 176 6 6 chr5 133457202 133457514 -66172636 + MER33 DNA MER1_type 13 324 0 468 0 0 0 chr5 133458798 133458850 -66171300 + (CA)n Simple_repeat Simple_repeat 2 53 0 353 327 87 55 chr5 133459877 133460152 -66169998 + L1MEd LINE L1 556 839 -5280 835 216 37 37 chr5 133460154 133460344 -66169806 - MER58C DNA MER1_type 0 215 26 276 310 96 11 chr5 133460368 133460748 -66169402 + L1MEd LINE L1 840 1257 -4862 315 285 198 33 chr5 133460848 133461454 -66168696 + L1MEd LINE L1 1356 1586 -904 311 107 18 0 chr5 133461447 133461503 -66168647 + L1MEd LINE L1 2261 2317 -3812 * 437 125 0 12 chr5 133461510 133461590 -66168560 + (GGGAGA)n Simple_repeat Simple_repeat 1 79 0 1882 160 0 0 chr5 133461591 133461873 -66168277 - AluSx SINE Alu -30 282 1 676 116 36 0 chr5 133461874 133461986 -66168164 + L1MA6 LINE L1 6184 6299 -1 22 0 0 0 chr5 133461986 133462008 -66168142 + AT_rich Low_complexity Low_complexity 1 22 0 623 256 98 27 chr5 133462087 133462493 -66167657 + L1MEd LINE L1 2564 2998 -3131 635 236 42 18 chr5 133462838 133463003 -66167147 - MIR SINE MIR -61 201 33 250 198 126 72 chr5 133463020 133463131 -66167019 - L2 LINE L2 -32 3281 3165 641 292 32 28 chr5 133463216 133463466 -66166684 - MIR SINE MIR -6 256 6 463 261 67 84 chr5 133464276 133464540 -66165610 + L1ME LINE L1 5382 5642 -528 2458 52 0 0 chr5 133464691 133464978 -66165172 + AluY SINE Alu 1 287 -24 449 99 75 12 chr5 133464994 133465322 -66164828 + (TA)n Simple_repeat Simple_repeat 1 348 0 372 234 65 76 chr5 133465662 133465931 -66164219 - L2 LINE L2 -387 2927 1879 2143 116 7 0 chr5 133466151 133466443 -66163707 + AluSx SINE Alu 1 294 -18 1600 160 56 7 chr5 133466586 133466855 -66163295 + AluJo SINE Alu 1 282 -30 1585 132 0 5 chr5 133466859 133467079 -66163071 - AluSg/x SINE Alu -7 303 85 374 309 18 6 chr5 133467155 133467320 -66162830 + HAL1 LINE L1 1473 1639 -868 21 0 0 0 chr5 133468904 133468925 -66161225 + AT_rich Low_complexity Low_complexity 1 21 0 411 21 0 0 chr5 133470123 133470171 -66159979 + (CA)n Simple_repeat Simple_repeat 2 49 0 21 36 0 0 chr5 133472945 133472973 -66157177 + AT_rich Low_complexity Low_complexity 1 28 0 289 216 173 22 chr5 133474369 133474508 -66155642 + L1ME LINE L1 5581 5740 -381 27 0 0 0 chr5 133474630 133474657 -66155493 + AT_rich Low_complexity Low_complexity 1 27 0 495 223 119 50 chr5 133474670 133474767 -66155383 - MER2 DNA MER2_type 0 345 256 1578 191 19 16 chr5 133474767 133475076 -66155074 + AluJb SINE Alu 1 310 -2 495 223 119 50 chr5 133475076 133475180 -66154970 - MER2 DNA MER2_type -89 256 130 1598 158 67 0 chr5 133475180 133475477 -66154673 - MER7A DNA MER2_type 0 346 32 769 181 0 0 chr5 133475492 133475619 -66154531 - MER2 DNA MER2_type -213 132 6 1479 203 25 11 chr5 133477244 133477525 -66152625 + AluJo SINE Alu 2 286 -26 475 168 159 0 chr5 133477839 133477946 -66152204 + FLAM_C SINE Alu 1 124 -9 190 401 53 13 chr5 133478135 133478287 -66151863 - L2 LINE L2 -189 3083 2926 701 214 15 0 chr5 133478481 133478612 -66151538 - FLAM_C SINE Alu 0 133 1 252 223 41 33 chr5 133478653 133478774 -66151376 - Charlie7 DNA MER1_type -50 2562 2441 288 250 191 46 chr5 133479290 133479442 -66150708 - MIR SINE MIR -33 229 56 313 293 10 0 chr5 133479928 133480027 -66150123 - MER3 DNA MER1_type -109 100 1 1643 131 3 61 chr5 133480409 133480681 -66149469 - MER4A LTR ERV1 0 664 359 2291 99 0 0 chr5 133480681 133480983 -66149167 - AluSq SINE Alu -11 302 1 1643 131 3 61 chr5 133480983 133481077 -66149073 - MER4A LTR ERV1 -305 359 261 522 144 21 10 chr5 133481077 133481174 -66148976 - MER4A LTR ERV1 -566 98 1 438 20 0 0 chr5 133481186 133481237 -66148913 + (TATG)n Simple_repeat Simple_repeat 2 52 0 261 188 8 109 chr5 133481429 133481558 -66148592 - L1M1 LINE L1 -732 5432 5318 2336 120 50 55 chr5 133481574 133482218 -66147932 - LTR8A LTR ERV1 0 727 1 801 270 30 50 chr5 133482317 133482680 -66147470 - L1ME1 LINE L1 -5 6161 5806 1421 205 32 20 chr5 133482696 133483042 -66147108 - MER4D LTR ERV1 0 903 554 1687 133 14 18 chr5 133483102 133483388 -66146762 - MER49 LTR ERV1 -638 285 1 499 226 43 12 chr5 133483388 133483552 -66146598 - L1ME1 LINE L1 -380 5786 5618 515 229 105 0 chr5 133483555 133483708 -66146442 - L1ME LINE L1 -479 5687 5519 1718 237 49 26 chr5 133483711 133484346 -66145804 - L1M4 LINE L1 -789 5357 4719 474 263 7 26 chr5 133484346 133484498 -66145652 - LTR7 LTR ERV1 0 450 302 5295 190 13 11 chr5 133484819 133485938 -66144212 - HERVH LTR ERV1 0 7713 6592 5697 139 128 102 chr5 133485943 133487597 -66142553 + pTR5 LTR ERV1 743 2438 0 25704 182 10 27 chr5 133487602 133493029 -66137121 - HERVH LTR ERV1 -1125 6588 1459 3213 201 12 26 chr5 133493057 133493854 -66136296 - HERVH LTR ERV1 -5745 1514 802 1094 228 81 45 chr5 133493942 133494363 -66135787 - HERVH LTR ERV1 -7277 436 1 492 219 8 17 chr5 133494363 133494482 -66135668 - LTR7 LTR ERV1 0 450 333 929 206 62 85 chr5 133494730 133495256 -66134894 - L1M4 LINE L1 -1424 4722 4083 2048 137 10 0 chr5 133495285 133495584 -66134566 + AluSx SINE Alu 1 302 -10 225 193 53 0 chr5 133495623 133495680 -66134470 - L1M4 LINE L1 -2091 4055 3996 4047 223 76 29 chr5 133495684 133496457 -66133693 - L1ME1 LINE L1 -148 6087 5352 2267 119 0 3 chr5 133496457 133496768 -66133382 - AluSx SINE Alu -2 310 1 4047 223 76 29 chr5 133496768 133497858 -66132292 - L1ME1 LINE L1 -883 5352 4141 2077 253 134 12 chr5 133497856 133497906 -66132244 + L1MEc LINE L1 2042 2085 -4130 * 1560 181 48 10 chr5 133497906 133498199 -66131951 + AluJo SINE Alu 1 304 -8 2077 253 134 12 chr5 133498199 133499398 -66130752 + L1MEc LINE L1 2085 3399 -2816 2125 98 53 3 chr5 133499415 133499700 -66130450 - AluSq SINE Alu -14 299 1 1183 277 36 16 chr5 133499809 133500308 -66129842 + L1MEc LINE L1 3577 4085 -2130 1759 219 87 49 chr5 133500324 133500357 -66129793 - L1M4 LINE L1 -1117 5029 4999 2041 151 0 3 chr5 133500357 133500661 -66129489 - AluJb SINE Alu -7 305 3 1759 219 87 49 chr5 133500661 133501382 -66128768 - L1M4 LINE L1 -1147 4999 4246 860 279 125 59 chr5 133501706 133502628 -66127522 - L1ME1 LINE L1 -5374 1022 40 1747 155 7 20 chr5 133502722 133503018 -66127132 + AluJb SINE Alu 1 292 -20 1688 197 24 3 chr5 133503680 133504015 -66126135 - MER2 DNA MER2_type -1 343 2 2153 127 0 7 chr5 133504843 133505151 -66124999 - AluSq SINE Alu -7 306 1 359 232 80 45 chr5 133505731 133505843 -66124307 + L2 LINE L2 3149 3264 -8 694 251 63 0 chr5 133506151 133506358 -66123792 + L1MC4 LINE L1 7689 7908 -134 25 31 0 0 chr5 133506397 133506429 -66123721 + AT_rich Low_complexity Low_complexity 1 32 0 1323 194 97 14 chr5 133506664 133506837 -66123313 - AluJo SINE Alu 0 312 104 252 59 0 0 chr5 133506837 133506871 -66123279 + (TTG)n Simple_repeat Simple_repeat 3 36 0 1323 194 97 14 chr5 133506871 133506985 -66123165 - AluJo SINE Alu -208 104 1 2201 287 105 26 chr5 133506985 133507170 -66122980 + L1M4 LINE L1 2349 2518 -3628 2016 154 0 3 chr5 133507170 133507481 -66122669 - AluSx SINE Alu -2 310 1 2201 287 105 26 chr5 133507481 133509264 -66120886 + L1M4 LINE L1 2518 4473 -1673 317 116 58 14 chr5 133509499 133509568 -66120582 + FAM SINE Alu 104 175 0 564 136 0 0 chr5 133510095 133510183 -66119967 - AluSx SINE Alu -5 304 217 1451 97 5 0 chr5 133510183 133510369 -66119781 - AluSx SINE Alu -125 187 1 1756 149 50 0 chr5 133510417 133510718 -66119432 + MER7A DNA MER2_type 33 346 0 329 339 42 77 chr5 133511152 133511412 -66118738 + L1MC4 LINE L1 6698 6948 -1094 313 325 24 16 chr5 133511494 133511617 -66118533 - L1MCc LINE L1 -3987 2954 2831 2184 103 10 0 chr5 133511710 133512001 -66118149 + AluSx SINE Alu 1 294 -18 475 304 105 18 chr5 133512126 133512494 -66117656 - L1MCc LINE L1 -4583 2539 1957 488 239 40 58 chr5 133512753 133513166 -66116984 - L1MCc LINE L1 -4891 1532 1299 678 245 140 22 chr5 133513211 133513489 -66116661 - L1MCc LINE L1 -5229 1194 884 2218 117 0 3 chr5 133513766 133514065 -66116085 + AluSx SINE Alu 1 298 -14 228 291 74 80 chr5 133514155 133514330 -66115820 - L1MEd LINE L1 -5595 524 351 283 273 140 13 chr5 133514938 133514996 -66115154 + MIR SINE MIR 28 77 -185 2220 100 3 3 chr5 133514996 133515295 -66114855 - AluSg SINE Alu -11 299 1 283 273 140 13 chr5 133515295 133515386 -66114764 + MIR SINE MIR 77 196 -66 265 299 26 84 chr5 133515625 133515779 -66114371 - L2 LINE L2 -230 3042 2898 1606 80 22 0 chr5 133516584 133516810 -66113340 + L1PA13 LINE L1 5930 6160 -3 761 159 0 0 chr5 133516833 133516959 -66113191 - FLAM_A SINE Alu -4 129 4 1065 133 117 0 chr5 133516968 133517164 -66112986 + Tigger7 DNA MER2_type 2269 2487 0 23 33 0 0 chr5 133517318 133517348 -66112802 + AT_rich Low_complexity Low_complexity 1 30 0 1163 173 9 14 chr5 133517444 133517658 -66112492 - AluJo SINE Alu -14 298 86 284 296 164 7 chr5 133517682 133517834 -66112316 + MIR SINE MIR 81 256 -6 2083 140 0 7 chr5 133518718 133519018 -66111132 + AluSg SINE Alu 1 298 -12 2281 87 3 0 chr5 133519903 133520203 -66109947 - AluY SINE Alu -10 301 1 2267 97 3 0 chr5 133521545 133521835 -66108315 + AluSx SINE Alu 1 291 -21 2266 232 41 32 chr5 133521858 133522635 -66107515 - L1ME1 LINE L1 -58 6108 5325 1277 168 0 5 chr5 133523087 133523307 -66106843 - HUERS-P1 LTR ERV1 -6044 219 1 2200 193 82 11 chr5 133523307 133523846 -66106304 - LTR8A LTR ERV1 0 727 151 261 0 0 0 chr5 133525115 133525144 -66105006 + (T)n Simple_repeat Simple_repeat 1 29 0 614 133 133 28 chr5 133525620 133525763 -66104387 - LTR8A LTR ERV1 -569 158 1 8825 139 30 31 chr5 133525763 133525992 -66104158 - Tigger2 DNA MER2_type -549 2169 1941 2074 87 0 4 chr5 133525992 133526258 -66103892 - AluY SINE Alu -11 300 36 8825 139 30 31 chr5 133526258 133526750 -66103400 - Tigger2 DNA MER2_type -777 1941 1450 1886 125 78 0 chr5 133526750 133527031 -66103119 + AluSg SINE Alu 1 303 -7 8825 139 30 31 chr5 133527031 133527935 -66102215 - Tigger2 DNA MER2_type -1268 1450 546 862 149 0 21 chr5 133527947 133528088 -66102062 - FRAM SINE Alu -1 175 38 1526 98 0 47 chr5 133528099 133528348 -66101802 - AluY SINE Alu 0 315 77 1636 164 43 3 chr5 133528350 133528679 -66101471 - Tigger2 DNA MER2_type -2176 542 201 658 194 8 15 chr5 133528685 133528819 -66101331 - FLAM_A SINE Alu -3 139 7 936 127 69 11 chr5 133528823 133529012 -66101138 - Tigger2 DNA MER2_type -2518 200 1 2239 94 7 13 chr5 133530011 133530310 -66099840 + AluSg SINE Alu 1 297 -13 306 271 108 69 chr5 133530314 133530498 -66099652 - L1ME4a LINE L1 -40 6081 5881 2298 101 0 3 chr5 133530498 133530795 -66099355 - AluSq SINE Alu -17 296 1 306 271 108 69 chr5 133530795 133530898 -66099252 - L1ME4a LINE L1 -240 5881 5783 1545 204 3 16 chr5 133531057 133531361 -66098789 - AluJo SINE Alu 0 312 13 195 42 0 0 chr5 133531367 133531391 -66098759 + (TCCTG)n Simple_repeat Simple_repeat 5 28 0 1938 98 49 4 chr5 133531410 133531697 -66098453 + AluSc SINE Alu 1 299 0 278 149 43 0 chr5 133531736 133531783 -66098367 + L2 LINE L2 3265 3313 0 1348 194 41 75 chr5 133532326 133532643 -66097507 + MLT1A2 LTR MaLR 1 304 -70 1650 197 0 13 chr5 133532643 133532943 -66097207 - AluJb SINE Alu -16 296 1 1348 194 41 75 chr5 133532943 133533012 -66097138 + MLT1A2 LTR MaLR 304 374 0 5157 185 35 22 chr5 133533271 133535422 -66094728 + L1MB4 LINE L1 3989 6167 -13 1230 164 135 66 chr5 133535727 133536001 -66094149 - AluJo SINE Alu -17 295 3 31 44 0 0 chr5 133536132 133536177 -66093973 + AT_rich Low_complexity Low_complexity 1 45 0 589 93 50 86 chr5 133536185 133536276 -66093874 + L1MB3 LINE L1 6050 6136 -47 2082 125 10 10 chr5 133536276 133536581 -66093569 + AluSx SINE Alu 1 305 -7 589 93 50 86 chr5 133536581 133536628 -66093522 + L1MB3 LINE L1 6136 6183 0 186 304 155 28 chr5 133537620 133537801 -66092349 - MIR SINE MIR -6 256 53 21 36 0 0 chr5 133538130 133538158 -66091992 + AT_rich Low_complexity Low_complexity 1 28 0 350 274 191 17 chr5 133538263 133538614 -66091536 - L1ME4a LINE L1 -2045 5763 5352 1637 170 44 10 chr5 133538719 133539013 -66091137 - AluJo SINE Alu -8 304 1 2283 92 16 7 chr5 133541160 133541463 -66088687 - AluSq SINE Alu -7 306 1 396 259 21 49 chr5 133542477 133542620 -66087530 + MIR SINE MIR 124 262 0 2051 116 0 20 chr5 133542851 133543153 -66086997 + AluSq SINE Alu 1 296 -17 499 165 0 31 chr5 133544548 133544645 -66085505 - MER5B DNA MER1_type -1 177 84 388 269 40 128 chr5 133545021 133545248 -66084902 - L2 LINE L2 -6 3307 3101 452 212 127 134 chr5 133545561 133545980 -66084170 - L1ME3A LINE L1 -77 6093 5678 1655 151 66 13 chr5 133546004 133546321 -66083829 + MER1B DNA MER1_type 6 339 0 281 271 60 13 chr5 133546326 133546477 -66083673 - L1ME3A LINE L1 -519 5651 5494 2292 90 0 22 chr5 133546577 133546888 -66083262 + AluSq SINE Alu 1 304 -9 284 258 32 48 chr5 133547028 133547152 -66082998 - MIR SINE MIR -25 237 116 * 429 309 40 36 chr5 133547147 133547370 -66082780 - MIR SINE MIR -38 224 1 208 320 39 39 chr5 133547823 133547901 -66082249 - L2 LINE L2 -48 3224 3147 2124 112 7 3 chr5 133550308 133550604 -66079546 - AluSx SINE Alu -15 297 1 2126 95 14 20 chr5 133550704 133550999 -66079151 - AluSg SINE Alu -17 293 1 3295 248 53 51 chr5 133551385 133551955 -66078195 - L2 LINE L2 -21 3292 2725 2293 102 0 0 chr5 133551955 133552258 -66077892 - AluY SINE Alu -8 303 1 719 200 16 0 chr5 133552262 133552387 -66077763 - FLAM_A SINE Alu -6 127 1 3295 248 53 51 chr5 133552387 133553118 -66077032 - L2 LINE L2 -590 2723 1982 4755 114 22 56 chr5 133553580 133554271 -66075879 - Tigger1 DNA MER2_type 0 2418 1760 1763 163 11 7 chr5 133554271 133554553 -66075597 - AluJo SINE Alu -1 311 29 4755 114 22 56 chr5 133554553 133554724 -66075426 - Tigger1 DNA MER2_type -658 1760 1585 838 168 15 0 chr5 133554724 133554855 -66075295 - FLAM_C SINE Alu -10 133 1 8618 134 55 11 chr5 133554855 133556378 -66073772 - Tigger1 DNA MER2_type -829 1589 1 289 284 73 0 chr5 133557157 133557266 -66072884 + MER94 DNA DNA 15 131 -3 613 223 17 39 chr5 133557636 133557870 -66072280 + MER106B DNA MER1_type 1 236 0 2305 75 14 3 chr5 133558225 133558519 -66071631 - AluY SINE Alu -14 297 1 198 229 71 29 chr5 133558539 133558609 -66071541 - L2 LINE L2 -682 2632 2560 2257 102 7 0 chr5 133558763 133559067 -66071083 - AluSq SINE Alu -3 310 5 1210 62 0 0 chr5 133559067 133559212 -66070938 - AluSp SINE Alu -168 145 1 349 274 67 22 chr5 133559219 133559398 -66070752 - L1ME3 LINE L1 -60 6102 5916 243 0 0 0 chr5 133559403 133559430 -66070720 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 558 213 120 0 chr5 133559432 133559540 -66070610 - FLAM_A SINE Alu -12 121 1 242 301 295 0 chr5 133559779 133559935 -66070215 + MIR SINE MIR 53 254 -8 275 308 161 70 chr5 133559951 133560250 -66069900 + L2 LINE L2 2945 3270 -2 2376 84 3 7 chr5 133560268 133560576 -66069574 + AluSp SINE Alu 1 307 -6 216 0 0 0 chr5 133560970 133560994 -66069156 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 203 167 0 136 chr5 133561337 133561403 -66068747 - MIR3 SINE MIR -16 192 136 1656 177 20 40 chr5 133562242 133562462 -66067688 - MER2 DNA MER2_type 0 344 132 1787 140 32 39 chr5 133562462 133562770 -66067380 + AluJb SINE Alu 1 306 -6 1656 177 20 40 chr5 133562770 133562899 -66067251 - MER2 DNA MER2_type -212 132 2 260 325 102 34 chr5 133562923 133563129 -66067021 - L2 LINE L2 -338 2976 2757 2060 149 0 3 chr5 133563166 133563474 -66066676 + AluSx SINE Alu 5 311 -1 471 338 29 39 chr5 133563620 133563928 -66066222 - L2 LINE L2 -947 2367 2063 790 267 76 5 chr5 133564025 133564235 -66065915 - MIR SINE MIR -22 240 16 2024 79 7 24 chr5 133564576 133564866 -66065284 - L1PA7 LINE L1 -4 6150 5866 1897 264 92 19 chr5 133564922 133565396 -66064754 - L1MC4 LINE L1 -368 7674 7236 1912 155 0 23 chr5 133565396 133565705 -66064445 - AluSx SINE Alu -10 302 1 1897 264 92 19 chr5 133565705 133566082 -66064068 - L1MC4 LINE L1 -806 7236 6761 981 80 0 8 chr5 133566310 133566435 -66063715 - AluSq/x SINE Alu -180 132 9 1234 96 0 0 chr5 133566435 133566591 -66063559 + AluSq SINE Alu 135 290 -23 297 276 0 86 chr5 133566624 133566729 -66063421 - MIR SINE MIR -139 123 28 653 210 0 8 chr5 133566767 133566891 -66063259 - FLAM_A SINE Alu -10 123 1 1446 171 98 0 chr5 133567149 133567413 -66062737 + AluJb SINE Alu 3 292 -20 2019 121 7 14 chr5 133568138 133568435 -66061715 - AluSx SINE Alu -17 295 1 947 191 0 6 chr5 133568935 133569103 -66061047 - MER5A DNA MER1_type 0 189 23 731 278 87 52 chr5 133569109 133569375 -66060775 - LTR67 LTR ERVL -9 548 260 1859 109 133 77 chr5 133569375 133569740 -66060410 + MSTA LTR MaLR 1 393 -35 2315 128 0 0 chr5 133569740 133570052 -66060098 - AluSx SINE Alu 0 312 1 1859 109 133 77 chr5 133570052 133570091 -66060059 + MSTA LTR MaLR 393 428 0 731 278 87 52 chr5 133570091 133570248 -66059902 - LTR67 LTR ERVL -297 260 110 853 196 58 6 chr5 133570393 133570566 -66059584 + MER58A DNA MER1_type 43 224 0 2182 90 0 0 chr5 133570645 133570923 -66059227 - AluY SINE Alu -33 278 1 1674 133 18 11 chr5 133571524 133571809 -66058341 - MER47A DNA MER2_type 0 366 80 987 184 5 5 chr5 133571836 133572021 -66058129 + AluJo SINE Alu 120 304 -8 462 181 24 0 chr5 133572028 133572111 -66058039 - MER47A DNA MER2_type -280 86 2 289 273 62 53 chr5 133572146 133572374 -66057776 + L1M4 LINE L1 4143 4376 -1770 1996 148 0 10 chr5 133572374 133572664 -66057486 - AluSx SINE Alu -25 287 1 289 273 62 53 chr5 133572664 133572757 -66057393 + L1M4 LINE L1 4376 4467 -1679 1011 311 85 2 chr5 133572763 133573188 -66056962 - LTR16B LTR ERVL -1 463 4 332 292 42 52 chr5 133573198 133573390 -66056760 - HERV16 LTR ERVL -6 4990 4801 * 1395 324 65 50 chr5 133573373 133574769 -66055381 - HERV16 LTR ERVL -441 5323 3531 932 144 52 26 chr5 133574769 133574963 -66055187 - MSTB1 LTR MaLR 0 432 234 1390 132 12 80 chr5 133574964 133575215 -66054935 + AluJo SINE Alu 1 234 -78 1076 155 26 94 chr5 133575235 133575500 -66054650 - MSTB1 LTR MaLR -185 247 1 694 181 0 38 chr5 133575618 133575751 -66054399 + MER68 LTR ERV1 6 133 -429 797 216 0 0 chr5 133575776 133575924 -66054226 - MER58B DNA MER1_type -3 338 191 510 254 30 8 chr5 133575919 133576053 -66054097 - MER20 DNA MER1_type -81 138 2 * 268 229 33 74 chr5 133576097 133576219 -66053931 - L1MEc LINE L1 -6244 152 36 1027 279 70 45 chr5 133576220 133577079 -66053071 - HERV16 LTR ERVL -2628 2368 2028 612 287 22 6 chr5 133577299 133577480 -66052670 - MLT1G1 LTR MaLR -411 184 1 322 307 150 20 chr5 133577487 133577640 -66052510 - HAL1 LINE L1 -2333 174 2 1748 152 30 20 chr5 133577669 133577971 -66052179 - AluJb SINE Alu -7 305 1 2559 80 0 0 chr5 133577992 133578303 -66051847 - AluY SINE Alu 0 311 1 817 66 0 0 chr5 133578549 133578655 -66051495 - L1PA5 LINE L1 -3 6151 6046 251 222 48 32 chr5 133578957 133579020 -66051130 + L3 LINE CR1 1093 1156 -421 364 289 91 0 chr5 133579474 133579595 -66050555 - L2 LINE L2 0 3313 3182 302 268 109 36 chr5 133579655 133579793 -66050357 + MIR SINE MIR 74 221 -41 29 47 0 0 chr5 133580186 133580229 -66049921 + AT_rich Low_complexity Low_complexity 1 43 0 249 330 11 0 chr5 133580339 133580427 -66049723 - L2 LINE L2 0 3272 3184 683 246 174 30 chr5 133580905 133581258 -66048892 - L1ME3 LINE L1 -9 6389 5953 2042 143 0 0 chr5 133581258 133581573 -66048577 - AluSq SINE Alu 0 313 1 683 246 174 30 chr5 133581573 133581679 -66048471 - L1ME3 LINE L1 -445 5953 5864 240 179 0 0 chr5 133581682 133581721 -66048429 + Tigger3(Golem) DNA MER2_type 3 41 -2988 * 1265 130 19 19 chr5 133581719 133581935 -66048215 + Tigger3(Golem) DNA MER2_type 2813 3028 -1 314 259 59 75 chr5 133581945 133581999 -66048151 - L1ME3 LINE L1 -554 5846 5793 2440 73 0 7 chr5 133581999 133582300 -66047850 - AluY SINE Alu -12 299 1 314 259 59 75 chr5 133582300 133582642 -66047508 - L1ME3 LINE L1 -607 5793 5447 2400 84 0 3 chr5 133582642 133582950 -66047200 - AluSq SINE Alu -6 307 1 663 214 56 0 chr5 133582950 133583076 -66047074 - FLAM_A SINE Alu 0 133 1 314 259 59 75 chr5 133583076 133583322 -66046828 - L1ME3 LINE L1 -951 5449 5180 25 51 0 0 chr5 133583323 133583362 -66046788 + AT_rich Low_complexity Low_complexity 1 39 0 288 77 0 0 chr5 133583378 133583417 -66046733 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 2145 98 0 0 chr5 133583432 133583706 -66046444 - AluSx SINE Alu -38 274 1 1579 220 135 10 chr5 133583707 133584306 -66045844 - Charlie1 DNA MER1_type -174 2587 1914 357 197 7 99 chr5 133584323 133584475 -66045675 - L1ME3 LINE L1 -1208 5174 5037 2112 113 0 49 chr5 133584590 133584917 -66045233 - AluSx SINE Alu -1 311 1 717 212 20 90 chr5 133584987 133585242 -66044908 - L1ME3 LINE L1 -1445 4937 4701 311 288 91 14 chr5 133585355 133585802 -66044348 - L1ME3 LINE L1 -4757 1625 1035 4993 176 55 10 chr5 133585930 133587410 -66042740 - L1MA6 LINE L1 0 7719 6148 1210 187 42 128 chr5 133587414 133587774 -66042376 - L1MA6 LINE L1 -3570 3995 3735 2090 139 0 3 chr5 133587774 133588075 -66042075 - AluSx SINE Alu -12 300 1 1210 187 42 128 chr5 133588075 133588465 -66041685 - L1MA6 LINE L1 -3830 3735 3313 1757 151 144 26 chr5 133588474 133588857 -66041293 - MSTA LTR MaLR 0 428 1 8863 118 16 78 chr5 133588857 133590531 -66039619 - MSTA-int LTR MaLR 0 1580 10 2246 105 7 0 chr5 133591819 133592114 -66038036 + AluSp SINE Alu 1 297 -16 410 313 170 0 chr5 133592192 133592339 -66037811 + MIR SINE MIR 11 182 -80 822 221 108 22 chr5 133592378 133592600 -66037550 + MIR SINE MIR 19 259 -3 221 293 47 28 chr5 133593394 133593500 -66036650 + MIR SINE MIR 149 256 -6 1871 152 26 10 chr5 133593552 133593855 -66036295 - AluSx SINE Alu -4 308 1 510 218 28 21 chr5 133594228 133594370 -66035780 - LTR41 LTR ERVL -613 160 18 343 284 91 10 chr5 133594696 133594893 -66035257 - ERVL LTR ERVL -384 5380 5168 2025 145 10 0 chr5 133594893 133595183 -66034967 - AluSx SINE Alu -19 293 1 1916 142 4 0 chr5 133595198 133595502 -66034648 - AluSx SINE Alu 0 315 11 563 286 106 17 chr5 133595528 133595829 -66034321 - ERVL LTR ERVL -350 5135 4808 1162 102 5 54 chr5 133595843 133596048 -66034102 + MER4A LTR ERV1 1 195 -469 * 1314 131 353 0 chr5 133596046 133596383 -66033767 - MER39 LTR ERV1 -251 456 1 287 285 58 48 chr5 133596392 133596599 -66033551 - L1ME3A LINE L1 -1 6169 5961 858 265 68 37 chr5 133596654 133596755 -66033395 - L1ME3A LINE L1 -438 5724 5628 1888 200 24 0 chr5 133596755 133597090 -66033060 - MER61A LTR ERV1 0 343 1 858 265 68 37 chr5 133597090 133597332 -66032818 - L1ME3A LINE L1 -534 5628 5395 1745 155 81 0 chr5 133597332 133597603 -66032547 - AluSx SINE Alu -19 293 1 858 265 68 37 chr5 133597603 133597848 -66032302 - L1ME3A LINE L1 -767 5395 5121 1128 133 6 11 chr5 133597856 133598037 -66032113 - MER4B LTR ERV1 0 610 431 2662 231 38 93 chr5 133600647 133601846 -66028304 - L1ME3A LINE L1 -1761 4385 3254 669 254 66 0 chr5 133601924 133602105 -66028045 + MER58A DNA MER1_type 1 193 -31 2188 132 3 0 chr5 133602105 133602415 -66027735 - AluSx SINE Alu -1 311 1 1278 194 129 32 chr5 133602417 133602851 -66027299 - L1ME3A LINE L1 -3170 2976 2501 2044 114 4 0 chr5 133602931 133603204 -66026946 + AluSx SINE Alu 1 274 -38 300 27 0 0 chr5 133603214 133603251 -66026899 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 252 310 97 35 chr5 133603503 133603648 -66026502 - L2 LINE L2 -12 3301 3148 400 272 239 9 chr5 133604074 133604287 -66025863 - MIR SINE MIR 0 262 1 2158 91 49 0 chr5 133604631 133604918 -66025232 + AluY SINE Alu 1 301 -10 2193 109 7 3 chr5 133604929 133605223 -66024927 + AluSg SINE Alu 1 295 -15 23 0 0 0 chr5 133605229 133605252 -66024898 + AT_rich Low_complexity Low_complexity 1 23 0 192 344 43 21 chr5 133605570 133605663 -66024487 + MIR SINE MIR 57 151 -111 385 288 5 27 chr5 133605747 133605931 -66024219 + (TA)n Simple_repeat Simple_repeat 1 180 0 374 262 78 53 chr5 133605952 133606158 -66023992 - L1ME4a LINE L1 -157 5964 5754 1724 154 4 4 chr5 133606162 133606428 -66023722 - AluJo SINE Alu -9 303 38 11029 104 39 33 chr5 133606428 133607775 -66022375 - MER41-int LTR ERV1 -1551 3329 1289 2245 113 0 10 chr5 133607775 133608084 -66022066 + AluSx SINE Alu 1 306 -6 11029 104 39 33 chr5 133608084 133608610 -66021540 - MER41-int LTR ERV1 -3591 1289 768 1065 166 18 9 chr5 133608607 133608891 -66021259 - MER41-int LTR ERV1 -4464 1482 355 * 2030 208 85 49 chr5 133608897 133609426 -66020724 - MER41-int LTR ERV1 -4736 1210 663 1975 147 0 26 chr5 133609923 133610235 -66019915 - AluJb SINE Alu -8 304 1 2122 141 0 0 chr5 133610633 133610945 -66019205 + AluSq SINE Alu 1 312 -1 2000 144 0 10 chr5 133611312 133611617 -66018533 + AluJb SINE Alu 1 302 -10 222 350 113 38 chr5 133612172 133612332 -66017818 + L2 LINE L2 3096 3267 -5 931 171 42 164 chr5 133612390 133612746 -66017404 + L1ME1 LINE L1 5783 6181 15 2065 125 3 14 chr5 133612746 133612905 -66017245 - AluSx SINE Alu -19 293 137 2189 84 31 3 chr5 133612905 133613192 -66016958 - AluY SINE Alu -16 295 1 2065 125 3 14 chr5 133613192 133613328 -66016822 - AluSx SINE Alu -175 137 1 931 171 42 164 chr5 133613328 133613355 -66016795 + L1ME1 LINE L1 6181 6111 -55 1708 178 0 7 chr5 133613355 133613631 -66016519 + AluJb SINE Alu 1 274 -38 931 171 42 164 chr5 133613631 133613679 -66016471 + L1ME1 LINE L1 6110 6162 -4 365 259 37 37 chr5 133613910 133614018 -66016132 - MIR SINE MIR -34 228 121 2288 98 0 13 chr5 133615285 133615590 -66014560 - AluY SINE Alu -10 301 1 29 70 0 0 chr5 133615768 133615825 -66014325 + AT_rich Low_complexity Low_complexity 1 57 0 460 308 26 19 chr5 133616235 133616391 -66013759 + MIR3 SINE MIR 40 196 -12 664 206 188 0 chr5 133616895 133617055 -66013095 + MER3 DNA MER1_type 1 190 -19 771 145 8 38 chr5 133617519 133617650 -66012500 + FLAM_C SINE Alu 1 127 -16 492 157 0 150 chr5 133618061 133618214 -66011936 + MER106A DNA MER1_type 107 236 0 252 310 76 21 chr5 133618214 133618359 -66011791 + HAL1 LINE L1 747 899 -1608 372 259 118 29 chr5 133618561 133618731 -66011419 + HAL1 LINE L1 1141 1325 -1182 292 261 115 39 chr5 133618781 133619015 -66011135 + HAL1 LINE L1 2255 2506 -1 21 0 0 0 chr5 133619020 133619041 -66011109 + AT_rich Low_complexity Low_complexity 1 21 0 2137 130 7 0 chr5 133619319 133619612 -66010538 + AluSx SINE Alu 1 295 -17 1161 205 84 48 chr5 133620042 133620183 -66009967 + MER2 DNA MER2_type 1 135 -209 2186 59 0 18 chr5 133620183 133620455 -66009695 + AluY SINE Alu 35 301 -10 1161 205 84 48 chr5 133620455 133620645 -66009505 + MER2 DNA MER2_type 135 344 0 2828 231 33 6 chr5 133620648 133621283 -66008867 + MER82 DNA MER2_type 2 653 0 26 30 0 0 chr5 133621321 133621354 -66008796 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 133621535 133621565 -66008585 + AT_rich Low_complexity Low_complexity 1 30 0 311 184 39 18 chr5 133621998 133622217 -66007933 + AluJb SINE Alu 6 296 -6 2021 118 10 26 chr5 133622331 133622637 -66007513 - AluSx SINE Alu -11 301 1 891 174 0 36 chr5 133623229 133623396 -66006754 - FRAM SINE Alu -15 161 1 1080 101 141 15 chr5 133623438 133623636 -66006514 - L1MA2 LINE L1 0 6304 6082 537 188 54 9 chr5 133623637 133623749 -66006401 - FLAM_C SINE Alu -26 117 1 1994 163 0 0 chr5 133623989 133624290 -66005860 - AluJb SINE Alu -11 301 1 3961 214 123 87 chr5 133624378 133626825 -66003325 + L1MC2 LINE L1 21 2380 -4046 2277 70 0 11 chr5 133626825 133627149 -66003001 + AluY SINE Alu 1 321 0 3961 214 123 87 chr5 133627149 133627209 -66002941 + L1MC2 LINE L1 2380 2436 -3990 2144 121 13 57 chr5 133627209 133627598 -66002552 + THE1C LTR MaLR 2 373 -2 3961 214 123 87 chr5 133627598 133628703 -66001447 + L1MC2 LINE L1 2436 3767 -2659 4689 204 42 52 chr5 133628715 133629570 -66000580 + L1MC2 LINE L1 4235 5097 -1527 1393 140 70 3 chr5 133629570 133629617 -66000533 + L1MA8 LINE L1 5987 6029 -262 1864 159 7 10 chr5 133629617 133629919 -66000231 + AluSx SINE Alu 6 306 -6 1393 140 70 3 chr5 133629919 133630157 -65999993 + L1MA8 LINE L1 6029 6291 0 4689 204 42 52 chr5 133630157 133630176 -65999974 + L1MC2 LINE L1 5097 5115 -1509 612 40 0 0 chr5 133630176 133630251 -65999899 + (TA)n Simple_repeat Simple_repeat 2 76 0 4689 204 42 52 chr5 133630251 133630263 -65999887 + L1MC2 LINE L1 5115 5126 -1498 249 33 0 0 chr5 133630263 133630293 -65999857 + (CAGAA)n Simple_repeat Simple_repeat 4 33 0 4689 204 42 52 chr5 133630293 133631707 -65998443 + L1MC2 LINE L1 5126 6508 -116 1861 157 4 4 chr5 133631707 133632035 -65998115 + AluSx SINE Alu 2 329 0 4689 204 42 52 chr5 133632035 133632142 -65998008 + L1MC2 LINE L1 6508 6615 -9 565 197 14 14 chr5 133633353 133633495 -65996655 + L1MB2 LINE L1 6027 6168 -3 24 32 0 0 chr5 133633541 133633572 -65996578 + AT_rich Low_complexity Low_complexity 1 31 0 35 41 0 0 chr5 133633877 133633926 -65996224 + AT_rich Low_complexity Low_complexity 1 49 0 803 141 25 0 chr5 133634183 133634304 -65995846 - FLAM_C SINE Alu -19 124 1 550 243 48 10 chr5 133634336 133634542 -65995608 - MER113 DNA MER1_type? -307 214 1 2362 98 0 9 chr5 133634563 133634878 -65995272 + AluSx SINE Alu 1 312 0 662 280 21 42 chr5 133634899 133635138 -65995012 - MIR SINE MIR -28 234 1 2305 95 3 0 chr5 133636275 133636571 -65993579 - AluSg SINE Alu -13 297 1 1378 153 9 14 chr5 133636597 133636820 -65993330 + AluSg/x SINE Alu 85 306 -6 2329 92 3 0 chr5 133636872 133637164 -65992986 - AluSc SINE Alu -16 293 1 21 36 0 0 chr5 133637327 133637355 -65992795 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 133637614 133637635 -65992515 + AT_rich Low_complexity Low_complexity 1 21 0 1524 150 105 10 chr5 133637873 133638179 -65991971 + MER1B DNA MER1_type 3 337 0 1007 203 28 14 chr5 133639065 133639277 -65990873 - AluJo SINE Alu -12 300 86 2021 260 229 25 chr5 133639633 133640757 -65989393 + L2 LINE L2 1959 3313 0 26 64 0 0 chr5 133641150 133641197 -65988953 + AT_rich Low_complexity Low_complexity 1 47 0 4678 165 20 22 chr5 133641683 133642071 -65988079 + L1MB3 LINE L1 5009 5396 -787 1586 154 15 26 chr5 133642071 133642338 -65987812 + AluJb SINE Alu 1 264 -48 4678 165 20 22 chr5 133642338 133643160 -65986990 + L1MB3 LINE L1 5396 6183 0 23 54 0 0 chr5 133644756 133644793 -65985357 + AT_rich Low_complexity Low_complexity 1 37 0 262 297 28 126 chr5 133644954 133645136 -65985014 + MER5B DNA MER1_type 2 165 -13 281 339 24 73 chr5 133645304 133645469 -65984681 + L2 LINE L2 2922 3078 -194 22 35 0 0 chr5 133646699 133646728 -65983422 + AT_rich Low_complexity Low_complexity 1 29 0 1545 222 3 10 chr5 133648376 133648678 -65981472 - AluJo SINE Alu -12 300 1 1615 169 177 17 chr5 133649259 133649701 -65980449 + Charlie1 DNA MER1_type 1 2761 0 396 307 135 88 chr5 133649757 133649947 -65980203 + L2 LINE L2 1868 2048 -1266 2101 53 50 14 chr5 133649947 133650228 -65979922 - AluY SINE Alu -20 291 1 396 307 135 88 chr5 133650228 133650844 -65979306 + L2 LINE L2 2048 2712 -602 1052 316 50 12 chr5 133650877 133651294 -65978856 + LTR16B LTR ERVL 1 433 -31 737 311 91 56 chr5 133651328 133651837 -65978313 + L2 LINE L2 2735 3256 -16 195 42 0 0 chr5 133651837 133651861 -65978289 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 737 311 91 56 chr5 133651861 133651874 -65978276 + L2 LINE L2 3256 3267 -5 2173 122 0 0 chr5 133652087 133652390 -65977760 + AluSx SINE Alu 5 307 -5 22 0 0 0 chr5 133652641 133652663 -65977487 + AT_rich Low_complexity Low_complexity 1 22 0 35 24 0 0 chr5 133652704 133652746 -65977404 + AT_rich Low_complexity Low_complexity 1 42 0 941 198 12 103 chr5 133653677 133653870 -65976280 + MER58A DNA MER1_type 1 169 -2251 3518 42 2 0 chr5 133653870 133654300 -65975850 - L1PA4 LINE L1 -3 6152 5722 941 198 12 103 chr5 133654300 133654349 -65975801 + MER58A DNA MER1_type 169 221 -3 2111 95 10 30 chr5 133654779 133655083 -65975067 + AluSx SINE Alu 1 298 -14 590 298 30 21 chr5 133656415 133656732 -65973418 - L1MC4a LINE L1 -211 5910 5583 4304 179 49 30 chr5 133656795 133658373 -65971777 + L1MB1 LINE L1 4573 6163 -5 2045 104 0 4 chr5 133658401 133658671 -65971479 + AluSg SINE Alu 7 275 -35 2107 111 0 7 chr5 133659574 133659862 -65970288 - AluSc SINE Alu -23 286 1 30283 105 18 30 chr5 133660595 133666455 -65963695 - L1PA7 LINE L1 -8 6461 1 1020 166 0 0 chr5 133666466 133666623 -65963527 - AluJo/FRAM SINE Alu -22 290 134 2252 98 17 0 chr5 133666623 133666919 -65963231 - AluSp SINE Alu -12 301 1 221 219 281 35 chr5 133667643 133667757 -65962393 + L2 LINE L2 3172 3313 0 738 153 36 124 chr5 133668211 133668251 -65961899 - Charlie1 DNA MER1_type 0 2761 2719 1846 148 45 0 chr5 133668251 133668541 -65961609 + AluSx SINE Alu 1 303 -9 738 153 36 124 chr5 133668541 133668749 -65961401 - Charlie1 DNA MER1_type -42 2719 2535 16411 39 3 1 chr5 133669266 133671287 -65958863 - L1PA5 LINE L1 -1051 5095 3070 7292 36 3 1 chr5 133671287 133672334 -65957816 + L1PA5 LINE L1 5090 6138 -16 306 250 22 54 chr5 133672356 133672448 -65957702 + L1MC4 LINE L1 6615 6703 -1339 * 315 284 23 0 chr5 133672400 133672488 -65957662 - L1MC4 LINE L1 -1339 6703 6614 * 340 333 8 0 chr5 133672458 133672578 -65957572 + L1MC4 LINE L1 6614 6734 -1308 256 282 39 0 chr5 133672592 133672670 -65957480 + MIR SINE MIR 81 161 -101 207 0 0 0 chr5 133672686 133672709 -65957441 + (TG)n Simple_repeat Simple_repeat 2 24 0 1087 125 18 48 chr5 133672777 133672945 -65957205 - AluJo SINE Alu -141 171 9 401 221 184 25 chr5 133673095 133673258 -65956892 - MIR SINE MIR -2 260 72 1169 161 0 0 chr5 133673371 133673545 -65956605 + MER1B DNA MER1_type 20 193 -104 878 252 84 8 chr5 133673548 133673810 -65956340 + L1MC4 LINE L1 7621 7902 -140 187 250 68 34 chr5 133674298 133674386 -65955764 + L2 LINE L2 2915 3005 -308 191 297 16 16 chr5 133674470 133674534 -65955616 + MIR SINE MIR 94 157 -105 343 300 30 20 chr5 133674664 133674764 -65955386 + L2 LINE L2 3117 3217 -55 818 119 0 45 chr5 133674765 133674899 -65955251 - MER1B DNA MER1_type 0 339 212 504 214 0 0 chr5 133674937 133675040 -65955110 - FLAM_A SINE Alu -3 139 37 300 327 9 85 chr5 133675322 133675388 -65954762 - L1M4 LINE L1 -1001 5145 5076 1888 106 3 66 chr5 133675388 133675691 -65954459 - AluSx SINE Alu -28 284 1 1739 168 3 26 chr5 133675691 133675994 -65954156 - AluJo SINE Alu -16 296 1 300 327 9 85 chr5 133675994 133676137 -65954013 - L1M4 LINE L1 -1068 5078 4951 375 206 3 10 chr5 133676138 133676218 -65953932 + FLAM_A SINE Alu 62 120 -13 364 220 107 70 chr5 133676242 133676410 -65953740 - L1M4 LINE L1 -1181 4965 4805 2431 78 0 0 chr5 133676410 133676716 -65953434 + AluY SINE Alu 1 306 -5 364 220 107 70 chr5 133676716 133676845 -65953305 - L1M4 LINE L1 -1341 4805 4638 347 328 69 39 chr5 133676893 133677198 -65952952 - L1M4 LINE L1 -1552 4594 4281 3871 91 13 4 chr5 133677548 133678097 -65952053 + MER41A LTR ERV1 1 554 0 355 185 0 0 chr5 133678817 133678882 -65951268 + FLAM SINE Alu 44 108 -25 1836 170 3 0 chr5 133679060 133679366 -65950784 + AluSx SINE Alu 1 307 -5 1240 181 144 25 chr5 133680438 133680764 -65949386 + MLT1A1 LTR MaLR 1 365 0 181 309 88 0 chr5 133681134 133681202 -65948948 + L3 LINE CR1 623 696 -881 26 64 0 0 chr5 133681665 133681712 -65948438 + AT_rich Low_complexity Low_complexity 1 47 0 238 272 10 58 chr5 133682074 133682117 -65948033 + L1ME3A LINE L1 5520 5564 -602 1932 169 3 7 chr5 133682117 133682425 -65947725 + AluJb SINE Alu 3 309 -3 238 272 10 58 chr5 133682425 133682484 -65947666 + L1ME3A LINE L1 5564 5617 -549 301 304 48 16 chr5 133682586 133682711 -65947439 + L1ME3A LINE L1 5817 5945 -225 5570 119 30 0 chr5 133683147 133684104 -65946046 - L1PA16 LINE L1 -1 6165 5201 6807 139 40 19 chr5 133685037 133685290 -65944860 + Tigger3b DNA MER2_type 2 248 -2780 2392 86 0 19 chr5 133685290 133685603 -65944547 + AluSc SINE Alu 1 307 -2 6807 139 40 19 chr5 133685603 133686263 -65943887 + Tigger3b DNA MER2_type 248 948 -2080 2218 111 3 0 chr5 133686263 133686570 -65943580 - AluSx SINE Alu -4 308 1 6807 139 40 19 chr5 133686570 133686860 -65943290 + Tigger3b DNA MER2_type 948 1231 0 190 273 36 0 chr5 133687282 133687337 -65942813 - L2 LINE L2 -2 3311 3255 1629 169 78 11 chr5 133687488 133687772 -65942378 - AluSx SINE Alu -9 303 1 526 328 67 82 chr5 133688033 133688362 -65941788 + L2 LINE L2 2896 3219 -53 930 213 149 26 chr5 133688507 133688893 -65941257 + L1MB7 LINE L1 5745 6178 0 2339 75 0 3 chr5 133688926 133689221 -65940929 - AluY SINE Alu -17 294 1 2385 236 126 21 chr5 133689239 133689664 -65940486 + L1ME2 LINE L1 4985 5364 -800 2114 118 0 28 chr5 133689664 133689986 -65940164 + AluSp SINE Alu 1 313 0 2385 236 126 21 chr5 133689986 133690622 -65939528 + L1ME2 LINE L1 5364 6163 -1 2276 109 0 0 chr5 133690696 133690990 -65939160 - AluSc SINE Alu -15 294 1 357 204 51 61 chr5 133691288 133691386 -65938764 - MIR SINE MIR -156 106 10 424 325 99 59 chr5 133691741 133692017 -65938133 - L2 LINE L2 -725 2589 2326 2132 144 0 0 chr5 133692017 133692329 -65937821 + AluSx SINE Alu 1 312 0 424 325 99 59 chr5 133692329 133692605 -65937545 - L2 LINE L2 -988 2326 1997 2091 108 14 20 chr5 133692605 133692902 -65937248 + AluSx SINE Alu 1 295 -17 424 325 99 59 chr5 133692902 133693096 -65937054 - L2 LINE L2 -1317 1997 1812 979 137 15 144 chr5 133695701 133695898 -65934252 + MER106A DNA MER1_type 1 155 -81 5756 110 27 2 chr5 133695898 133697133 -65933017 + L1PA16 LINE L1 4897 6166 0 979 137 15 144 chr5 133697133 133697206 -65932944 + MER106A DNA MER1_type 155 236 0 480 139 0 0 chr5 133697735 133697814 -65932336 + (GGGA)n Simple_repeat Simple_repeat 2 80 0 6370 150 23 5 chr5 133698137 133699651 -65930499 + L1MA3 LINE L1 4125 5669 -636 3403 88 59 0 chr5 133699652 133700161 -65929989 + L1MA3 LINE L1 5732 6270 -35 342 0 0 0 chr5 133700167 133700205 -65929945 + (CA)n Simple_repeat Simple_repeat 2 39 0 1579 179 210 8 chr5 133700246 133700599 -65929551 - MSTB LTR MaLR -2 424 1 2795 133 17 2 chr5 133700762 133701184 -65928966 + MSTA LTR MaLR 1 428 0 1633 186 14 3 chr5 133701186 133701481 -65928669 - AluJb SINE Alu -12 300 3 1809 175 3 3 chr5 133701819 133702116 -65928034 + AluJo SINE Alu 1 297 -15 696 127 175 0 chr5 133702981 133703107 -65927043 - AluJo SINE Alu -7 305 158 * 738 161 0 0 chr5 133703102 133703220 -65926930 - AluJo SINE Alu -194 118 1 2801 179 27 39 chr5 133703395 133703955 -65926195 - MLT2B3 LTR ERVL 0 554 2 2514 72 10 0 chr5 133704030 133704335 -65925815 + AluSc SINE Alu 1 308 -1 1951 107 41 0 chr5 133705412 133705682 -65924468 + AluSx SINE Alu 7 287 -25 198 0 0 0 chr5 133705687 133705709 -65924441 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 406 305 125 25 chr5 133707471 133707671 -65922479 + MIR SINE MIR 23 242 -20 1542 31 37 0 chr5 133707818 133708009 -65922141 - L1PA3 LINE L1 -2 6153 5956 1580 174 51 27 chr5 133708918 133709291 -65920859 + L1ME1 LINE L1 5785 6166 0 292 300 114 71 chr5 133709374 133709794 -65920356 + L2 LINE L2 2287 2724 -590 1507 210 52 53 chr5 133710250 133710755 -65919395 + Charlie4a DNA MER1_type 1 504 -4 1684 189 3 3 chr5 133710920 133711206 -65918944 - AluJo SINE Alu -26 286 1 197 83 28 0 chr5 133712370 133712406 -65917744 + (TA)n Simple_repeat Simple_repeat 1 37 0 2257 94 3 0 chr5 133712407 133712706 -65917444 - AluSq SINE Alu -13 300 1 382 205 36 0 chr5 133712709 133712792 -65917358 + MIR SINE MIR 167 252 -10 1208 200 68 141 chr5 133713259 133713525 -65916625 + L1ME3A LINE L1 5642 5884 -286 240 114 0 0 chr5 133713525 133713560 -65916590 + U6 snRNA snRNA 3 37 -70 1208 200 68 141 chr5 133713560 133713819 -65916331 + L1ME3A LINE L1 5884 6160 -10 793 173 6 49 chr5 133713829 133713991 -65916159 + AluJo SINE Alu 1 155 -157 26 30 0 0 chr5 133714085 133714118 -65916032 + AT_rich Low_complexity Low_complexity 1 33 0 443 270 121 49 chr5 133714160 133714548 -65915602 + L1MC5 LINE L1 6640 7032 -929 268 202 10 106 chr5 133714602 133714638 -65915512 + L1MC4 LINE L1 7163 7201 -841 700 197 230 0 chr5 133714638 133714790 -65915360 + MER5A DNA MER1_type 3 189 0 268 202 10 106 chr5 133714790 133714857 -65915293 + L1MC4 LINE L1 7201 7256 -786 736 152 8 0 chr5 133714967 133715092 -65915058 + FLAM_C SINE Alu 13 138 -5 417 214 90 105 chr5 133715100 133715235 -65914915 + L1MC5 LINE L1 7272 7408 -553 7067 11 0 0 chr5 133715235 133716038 -65914112 + L1PA2 LINE L1 5353 6155 0 417 214 90 105 chr5 133716038 133716276 -65913874 + L1MC5 LINE L1 7408 7648 -313 2272 97 0 34 chr5 133716276 133716597 -65913553 + AluSc SINE Alu 1 310 0 417 214 90 105 chr5 133716597 133716790 -65913360 + L1MC5 LINE L1 7648 7925 -36 790 116 8 16 chr5 133716801 133716922 -65913228 + AluJb SINE Alu 5 124 -188 180 0 0 0 chr5 133716922 133716942 -65913208 + (TAA)n Simple_repeat Simple_repeat 2 21 0 405 284 75 78 chr5 133716995 133717277 -65912873 + HAL1 LINE L1 57 337 -2170 9409 99 52 83 chr5 133717287 133718754 -65911396 + Tigger1 DNA MER2_type 2 1513 -905 1555 203 23 10 chr5 133718754 133719060 -65911090 + AluJo SINE Alu 1 310 -2 9409 99 52 83 chr5 133719060 133719145 -65911005 + Tigger1 DNA MER2_type 1513 1599 -819 1582 163 25 74 chr5 133719145 133719470 -65910680 + AluJb SINE Alu 1 309 -3 9409 99 52 83 chr5 133719470 133719718 -65910432 + Tigger1 DNA MER2_type 1599 1747 -671 844 83 0 0 chr5 133719732 133719841 -65910309 - AluSq/x SINE Alu -203 109 1 870 189 53 21 chr5 133719849 133720039 -65910111 + Tigger1 DNA MER2_type 2222 2417 -1 1283 249 101 70 chr5 133720192 133721336 -65908814 + HAL1 LINE L1 1049 2228 -279 1955 156 7 10 chr5 133721417 133721725 -65908425 + AluJo SINE Alu 1 307 -5 636 86 0 60 chr5 133721853 133722088 -65908062 + (TA)n Simple_repeat Simple_repeat 1 220 0 2318 92 16 0 chr5 133722151 133722454 -65907696 + AluSq SINE Alu 1 308 -5 39 18 0 18 chr5 133722580 133722602 -65907548 + AT_rich Low_complexity Low_complexity 1 22 -34 724 198 0 0 chr5 133722602 133722718 -65907432 + FLAM_A SINE Alu 1 116 -17 39 18 0 18 chr5 133722718 133722752 -65907398 + AT_rich Low_complexity Low_complexity 22 56 0 22 35 0 0 chr5 133722917 133722946 -65907204 + AT_rich Low_complexity Low_complexity 1 29 0 420 277 143 0 chr5 133723089 133723201 -65906949 - L2 LINE L2 0 3313 3186 1741 182 114 8 chr5 133723444 133723802 -65906348 + MSTD LTR MaLR 1 396 0 182 139 0 28 chr5 133723845 133723881 -65906269 - MIR SINE MIR -72 190 156 203 303 30 15 chr5 133724214 133724280 -65905870 - MIR SINE MIR -166 96 30 932 271 29 0 chr5 133724404 133724614 -65905536 + MIR SINE MIR 15 230 -32 598 242 13 40 chr5 133724708 133724857 -65905293 + FRAM SINE Alu 1 145 -31 2094 87 18 96 chr5 133725265 133725598 -65904552 + AluSx SINE Alu 1 307 -5 2502 111 15 0 chr5 133725754 133726143 -65904007 + L1MA5 LINE L1 5603 5997 -303 32 43 0 0 chr5 133726153 133726199 -65903951 + AT_rich Low_complexity Low_complexity 1 46 0 985 271 90 49 chr5 133726411 133726942 -65903208 + L2 LINE L2 1823 2375 -939 280 230 95 0 chr5 133726963 133727037 -65903113 - L2 LINE L2 0 3272 3192 22 0 0 0 chr5 133727048 133727070 -65903080 + AT_rich Low_complexity Low_complexity 1 22 0 1335 153 5 5 chr5 133727158 133727381 -65902769 + AluJb SINE Alu 84 306 -6 253 309 0 29 chr5 133727598 133727666 -65902484 - L2 LINE L2 -199 3073 3008 502 194 159 83 chr5 133727801 133728200 -65901950 + L1MC5 LINE L1 6816 7233 -728 363 299 60 0 chr5 133728295 133728412 -65901738 + L1MC5 LINE L1 7260 7383 -578 292 127 73 18 chr5 133728426 133728481 -65901669 - MER5A DNA MER1_type -10 179 122 353 277 64 20 chr5 133728549 133728751 -65901399 + L1MC5 LINE L1 7499 7709 -252 243 304 25 0 chr5 133728904 133728983 -65901167 - MIR SINE MIR -29 233 153 2529 63 0 0 chr5 133729039 133729339 -65900811 - AluSq SINE Alu -13 300 1 232 328 0 0 chr5 133729366 133729424 -65900726 - L2 LINE L2 -635 2679 2622 1381 174 47 7 chr5 133729501 133729800 -65900350 + MER46B DNA MER2_type 51 236 0 1823 138 7 30 chr5 133729915 133730213 -65899937 - AluJb SINE Alu -21 291 1 347 110 209 0 chr5 133730814 133730905 -65899245 + L1M3 LINE L1 5380 5489 -679 434 113 14 28 chr5 133730926 133730997 -65899153 + AluJ/FLAM SINE Alu 1 70 -242 812 176 7 0 chr5 133730997 133731133 -65899017 + AluJo/FRAM SINE Alu 170 306 -6 30 45 0 0 chr5 133731134 133731178 -65898972 + AT_rich Low_complexity Low_complexity 1 44 0 1361 224 21 12 chr5 133731179 133731518 -65898632 + L1ME1 LINE L1 5473 5814 -352 575 229 29 14 chr5 133731525 133731665 -65898485 + AluJb SINE Alu 132 273 -39 585 189 183 16 chr5 133731703 133731894 -65898256 + L1ME1 LINE L1 5940 6162 -4 26 0 0 0 chr5 133732676 133732702 -65897448 + AT_rich Low_complexity Low_complexity 1 26 0 334 294 128 66 chr5 133733558 133733878 -65896272 + L1M2 LINE L1 899 1238 -5611 21 0 0 0 chr5 133733924 133733945 -65896205 + GC_rich Low_complexity Low_complexity 1 21 0 1210 160 56 101 chr5 133735077 133735232 -65894918 + AluJb SINE Alu 1 137 -165 2038 93 38 10 chr5 133735232 133735522 -65894628 + AluSq SINE Alu 1 298 -15 1210 160 56 101 chr5 133735522 133735672 -65894478 + AluJb SINE Alu 137 292 -10 199 217 464 0 chr5 133736073 133736239 -65893911 - L2 LINE L2 -51 3262 3020 1927 288 193 15 chr5 133737660 133738595 -65891555 - L2 LINE L2 -4 3309 2541 2339 80 0 35 chr5 133738595 133738909 -65891241 - AluY SINE Alu -8 303 1 1927 288 193 15 chr5 133738909 133739389 -65890761 - L2 LINE L2 -772 2541 1633 300 267 173 0 chr5 133739388 133739463 -65890687 - L2 LINE L2 -25 3247 3160 * 305 336 34 47 chr5 133739595 133739727 -65890423 - L2 LINE L2 -9 3263 3132 1868 138 0 52 chr5 133739727 133740052 -65890098 + AluSx SINE Alu 1 308 -4 305 336 34 47 chr5 133740052 133740068 -65890082 - L2 LINE L2 -140 3132 3117 756 262 79 37 chr5 133740145 133740599 -65889551 - MLT1K LTR MaLR -3 473 1 723 337 68 35 chr5 133740698 133741301 -65888849 - L2 LINE L2 -1066 2248 1626 2093 133 3 7 chr5 133741466 133741768 -65888382 - AluJo SINE Alu -11 301 1 2436 76 0 0 chr5 133742137 133742440 -65887710 - AluY SINE Alu -8 303 1 180 320 39 51 chr5 133742842 133742920 -65887230 + L2 LINE L2 3146 3222 -50 22 35 0 0 chr5 133744004 133744033 -65886117 + AT_rich Low_complexity Low_complexity 1 29 0 369 280 224 0 chr5 133744722 133744865 -65885285 + MER5B DNA MER1_type 1 175 -3 464 267 123 0 chr5 133744879 133745042 -65885108 + MER5A DNA MER1_type 4 189 0 188 245 176 20 chr5 133745049 133745151 -65884999 + L2 LINE L2 552 669 -2645 242 317 148 10 chr5 133745428 133745529 -65884621 - MER5A DNA MER1_type -73 116 2 1720 167 45 0 chr5 133745671 133745959 -65884191 + AluJb SINE Alu 1 301 -11 311 323 123 23 chr5 133745985 133746115 -65884035 + L2 LINE L2 3129 3271 -1 2177 92 30 16 chr5 133746404 133746709 -65883441 + AluSc SINE Alu 1 309 0 476 245 126 0 chr5 133746802 133746953 -65883197 - MIR SINE MIR -16 246 77 346 329 36 6 chr5 133747296 133747439 -65882711 + MIR3 SINE MIR 17 162 -46 211 301 151 21 chr5 133747439 133747532 -65882618 - MER5A DNA MER1_type -1 188 84 189 305 102 0 chr5 133747550 133747609 -65882541 + L3 LINE CR1 1495 1559 -18 1571 106 181 15 chr5 133748218 133748483 -65881667 - AluSg1 SINE Alu 0 309 1 1263 89 11 21 chr5 133748486 133748677 -65881473 - AluY SINE Alu -13 298 110 326 241 179 0 chr5 133748777 133748939 -65881211 - MER46C DNA MER2_type -147 191 1 245 279 48 0 chr5 133748942 133749046 -65881104 + HAL1 LINE L1 1550 1658 -849 315 300 73 64 chr5 133749571 133749639 -65880511 + L1M4 LINE L1 2288 2354 -3792 624 171 57 16 chr5 133749639 133749762 -65880388 + FLAM_C SINE Alu 1 128 -5 315 300 73 64 chr5 133749762 133750023 -65880127 + L1M4 LINE L1 2354 2620 -3526 256 279 73 40 chr5 133750030 133750202 -65879948 + L1M4 LINE L1 2676 2862 -3284 1954 63 4 0 chr5 133750202 133750440 -65879710 + AluY SINE Alu 59 297 -14 256 279 73 40 chr5 133750440 133750539 -65879611 + L1M4 LINE L1 2862 2956 -3190 187 190 224 17 chr5 133750851 133750909 -65879241 + MIR3 SINE MIR 116 185 -23 382 300 91 55 chr5 133751282 133751535 -65878615 + L1ME4a LINE L1 5577 5838 -283 234 0 0 0 chr5 133752973 133752999 -65877151 + (A)n Simple_repeat Simple_repeat 1 26 0 21 82 0 0 chr5 133753167 133753216 -65876934 + AT_rich Low_complexity Low_complexity 1 49 0 1578 201 17 3 chr5 133753223 133753522 -65876628 + AluJo SINE Alu 1 303 -9 1297 175 82 74 chr5 133753530 133753908 -65876242 + L1MB2 LINE L1 5444 5824 -347 548 239 0 23 chr5 133753908 133754038 -65876112 + FLAM_A SINE Alu 8 134 -8 1965 152 32 0 chr5 133754038 133754386 -65875764 + L1MB2 LINE L1 5813 6171 0 2525 62 0 0 chr5 133754398 133754703 -65875447 + AluY SINE Alu 2 306 -5 335 283 102 80 chr5 133754843 133755055 -65875095 - L1MC4a LINE L1 -1757 6051 5826 554 259 36 0 chr5 133755055 133755167 -65874983 - FLAM_A SINE Alu -17 116 1 335 283 102 80 chr5 133755167 133755315 -65874835 - L1MC4a LINE L1 -1982 5826 5683 311 220 25 107 chr5 133755365 133755524 -65874626 - L1MC4a LINE L1 -465 5656 5511 2305 86 3 3 chr5 133755797 133756088 -65874062 - AluSx SINE Alu -21 291 1 2123 128 0 28 chr5 133756123 133756444 -65873706 - AluSx SINE Alu 0 312 1 2549 68 0 0 chr5 133756466 133756777 -65873373 - AluY SINE Alu 0 311 1 2083 106 0 11 chr5 133757369 133757651 -65872499 + AluSx SINE Alu 28 306 -6 435 308 84 21 chr5 133757771 133758122 -65872028 - MLT1K LTR MaLR 0 615 218 1638 138 31 101 chr5 133758308 133758635 -65871515 + AluJb SINE Alu 1 304 -8 474 256 77 24 chr5 133759852 133760059 -65870091 - MLT1L LTR MaLR -236 379 162 760 225 52 64 chr5 133760804 133761125 -65869025 + MER102a DNA MER1_type 25 330 0 339 250 77 19 chr5 133761199 133761303 -65868847 + MIR SINE MIR 1 110 -152 208 328 124 5 chr5 133761369 133761555 -65868595 + L2 LINE L2 2331 2538 -776 484 218 34 76 chr5 133761883 133762005 -65868145 + L1ME LINE L1 4257 4383 -1763 1757 170 0 29 chr5 133762005 133762311 -65867839 + AluJo SINE Alu 1 297 -15 484 218 34 76 chr5 133762311 133762542 -65867608 + L1ME LINE L1 4383 4648 -1498 1137 145 0 0 chr5 133762550 133762716 -65867434 + AluSg/x SINE Alu 134 299 -13 920 255 101 14 chr5 133762725 133763226 -65866924 + L1ME LINE L1 4643 5213 -933 2318 97 0 0 chr5 133763263 133763574 -65866576 + AluY SINE Alu 1 311 0 7632 38 18 2 chr5 133763577 133768471 -65861679 + L1PA3 LINE L1 1 6151 -4 7632 30 0 0 chr5 133768471 133769482 -65860668 + L1PA3 LINE L1 5145 6155 0 3838 145 17 1 chr5 133769490 133770207 -65859943 + L1 LINE L1 4182 4909 -1237 404 114 253 0 chr5 133770207 133770286 -65859864 - Tigger7 DNA MER2_type 0 2487 2389 * 1437 186 19 4 chr5 133770284 133770547 -65859603 - Tigger7 DNA MER2_type -466 267 1 2298 143 27 11 chr5 133770547 133770995 -65859155 + L1 LINE L1 4908 5362 -784 855 202 122 12 chr5 133770998 133771273 -65858877 + MER57A LTR ERV1 132 403 0 1053 191 122 51 chr5 133771276 133771668 -65858482 + L1ME2 LINE L1 5721 6140 -24 1758 146 6 75 chr5 133772264 133772585 -65857565 + AluJo SINE Alu 1 299 -13 314 319 222 23 chr5 133772718 133772984 -65857166 + L3 LINE CR1 1245 1563 -14 285 291 128 26 chr5 133773262 133773379 -65856771 - MIR3 SINE MIR -3 205 77 419 188 118 9 chr5 133773755 133773883 -65856267 + L1ME LINE L1 5542 5680 -486 233 158 0 0 chr5 133773932 133773970 -65856180 + Alu SINE Alu 1 38 -270 311 297 32 49 chr5 133779346 133779531 -65850619 + L1M4c LINE L1 622 803 -5500 441 286 30 14 chr5 133779699 133779970 -65850180 + L1M4c LINE L1 600 1337 -4966 21 36 0 0 chr5 133780851 133780879 -65849271 + AT_rich Low_complexity Low_complexity 1 28 0 289 216 173 22 chr5 133782275 133782414 -65847736 + L1ME LINE L1 5581 5740 -381 27 0 0 0 chr5 133782536 133782563 -65847587 + AT_rich Low_complexity Low_complexity 1 27 0 495 223 119 50 chr5 133782576 133782673 -65847477 - MER2 DNA MER2_type 0 345 256 1578 191 19 16 chr5 133782673 133782982 -65847168 + AluJb SINE Alu 1 310 -2 495 223 119 50 chr5 133782982 133783086 -65847064 - MER2 DNA MER2_type -89 256 130 1598 158 67 0 chr5 133783086 133783383 -65846767 - MER7A DNA MER2_type 0 346 32 769 181 0 0 chr5 133783398 133783525 -65846625 - MER2 DNA MER2_type -213 132 6 1434 204 29 11 chr5 133785148 133785428 -65844722 + AluJo SINE Alu 2 286 -26 475 168 159 0 chr5 133785740 133785847 -65844303 + FLAM_C SINE Alu 1 124 -9 190 401 53 13 chr5 133786036 133786188 -65843962 - L2 LINE L2 -189 3083 2926 701 214 15 0 chr5 133786382 133786513 -65843637 - FLAM_C SINE Alu 0 133 1 252 223 41 33 chr5 133786554 133786675 -65843475 - Charlie7 DNA MER1_type -50 2562 2441 288 250 191 46 chr5 133787190 133787342 -65842808 - MIR SINE MIR -33 229 56 313 293 10 0 chr5 133787828 133787927 -65842223 - MER3 DNA MER1_type -109 100 1 2266 232 41 32 chr5 133788749 133789526 -65840624 + L1ME1 LINE L1 5325 6108 -58 2267 97 3 0 chr5 133789549 133789839 -65840311 - AluSx SINE Alu -21 291 1 2281 87 3 0 chr5 133791181 133791481 -65838669 + AluY SINE Alu 1 301 -10 2083 140 0 7 chr5 133792366 133792666 -65837484 - AluSg SINE Alu -12 298 1 9224 174 5 5 chr5 133793492 133795248 -65834902 + HERVH LTR ERV1 4832 6588 -1125 5697 139 128 102 chr5 133795253 133796907 -65833243 - pTR5 LTR ERV1 0 2438 743 5295 190 13 11 chr5 133796912 133798031 -65832119 + HERVH LTR ERV1 6592 7713 0 474 263 7 26 chr5 133798352 133798504 -65831646 + LTR7 LTR ERV1 302 450 0 1718 237 49 26 chr5 133798504 133799139 -65831011 + L1ME LINE L1 4719 5357 -789 515 229 105 0 chr5 133799142 133799295 -65830855 + L1ME LINE L1 5519 5687 -479 499 226 43 12 chr5 133799298 133799462 -65830688 + L1ME1 LINE L1 5618 5786 -380 1687 133 14 18 chr5 133799462 133799748 -65830402 + MER49 LTR ERV1 1 285 -638 1421 205 32 20 chr5 133799808 133800154 -65829996 + MER4D LTR ERV1 554 903 0 801 270 30 50 chr5 133800170 133800533 -65829617 + L1ME1 LINE L1 5806 6161 -5 2336 120 50 55 chr5 133800632 133801276 -65828874 + LTR8A LTR ERV1 1 727 0 261 150 11 116 chr5 133801292 133801421 -65828729 + L1M1 LINE L1 5318 5433 -732 438 20 0 0 chr5 133801613 133801664 -65828486 + (CATA)n Simple_repeat Simple_repeat 2 52 0 522 144 21 10 chr5 133801676 133801773 -65828377 + MER4A LTR ERV1 1 98 -566 1643 131 3 61 chr5 133801773 133801867 -65828283 + MER4A LTR ERV1 261 359 -305 2291 99 0 0 chr5 133801867 133802169 -65827981 + AluSq SINE Alu 1 302 -11 1643 131 3 61 chr5 133802169 133802441 -65827709 + MER4A LTR ERV1 359 664 0 858 265 68 37 chr5 133802449 133802694 -65827456 + L1ME3A LINE L1 5121 5357 -805 1745 155 81 0 chr5 133802694 133802965 -65827185 + AluSx SINE Alu 1 293 -19 858 265 68 37 chr5 133802965 133803207 -65826943 + L1ME3A LINE L1 5357 5628 -534 1888 200 24 0 chr5 133803207 133803542 -65826608 + MER61A LTR ERV1 1 343 0 858 265 68 37 chr5 133803542 133803643 -65826507 + L1ME3A LINE L1 5628 5724 -438 287 285 58 48 chr5 133803698 133803905 -65826245 + L1ME3A LINE L1 5961 6169 -1 1314 131 353 0 chr5 133803914 133804251 -65825899 + MER39 LTR ERV1 1 456 -251 1162 102 5 54 chr5 133804249 133804454 -65825696 - MER4A LTR ERV1 -469 195 1 * 563 286 106 17 chr5 133804468 133804769 -65825381 + MERVL LTR ERVL 4808 5135 -350 1917 142 4 0 chr5 133804795 133805099 -65825051 + AluSx SINE Alu 11 315 0 2025 145 10 0 chr5 133805114 133805404 -65824746 + AluSx SINE Alu 1 293 -19 343 284 91 10 chr5 133805404 133805601 -65824549 + MERVL LTR ERVL 5168 5380 -384 510 218 28 21 chr5 133805927 133806069 -65824081 + LTR41 LTR ERVL 18 160 -613 1871 152 26 10 chr5 133806442 133806745 -65823405 + AluSx SINE Alu 1 308 -4 221 293 47 28 chr5 133806797 133806903 -65823247 - MIR SINE MIR -6 256 149 822 221 108 22 chr5 133807698 133807920 -65822230 - MIR SINE MIR -3 259 19 410 313 170 0 chr5 133807959 133808106 -65822044 - MIR SINE MIR -80 182 11 2246 105 7 0 chr5 133808183 133808478 -65821672 - AluSp SINE Alu -16 297 1 8806 117 17 78 chr5 133809742 133811414 -65818736 + MSTA-int LTR MaLR 10 1580 0 1763 149 147 26 chr5 133811414 133811796 -65818354 + MSTA LTR MaLR 1 428 0 1159 187 48 129 chr5 133811805 133812191 -65817959 + L1MA6 LINE L1 3313 3608 -3957 2090 139 0 3 chr5 133812191 133812492 -65817658 + AluSx SINE Alu 1 300 -12 1159 187 48 129 chr5 133812492 133812852 -65817298 + L1MA6 LINE L1 3608 3995 -3570 4993 175 53 10 chr5 133812856 133814336 -65815814 + L1MA6 LINE L1 6148 7719 0 481 280 69 4 chr5 133814425 133814908 -65815242 + L1ME4a LINE L1 983 1669 -4757 717 212 20 90 chr5 133815021 133815276 -65814874 + L1ME4a LINE L1 4745 4981 -1445 2112 113 0 49 chr5 133815346 133815673 -65814477 + AluSx SINE Alu 1 311 -1 338 196 7 105 chr5 133815788 133815941 -65814209 + L1ME4a LINE L1 5081 5218 -1208 1544 218 141 10 chr5 133815958 133816554 -65813596 + Charlie1 DNA MER1_type 1914 2587 -174 2136 99 0 0 chr5 133816555 133816828 -65813322 + AluSx SINE Alu 1 273 -39 217 180 16 16 chr5 133816871 133816932 -65813218 + G-rich Low_complexity Low_complexity 3 63 0 350 274 191 17 chr5 133817072 133817423 -65812727 + L1ME4a LINE L1 5632 6043 -2045 21 36 0 0 chr5 133817528 133817556 -65812594 + AT_rich Low_complexity Low_complexity 1 28 0 186 304 155 28 chr5 133817885 133818066 -65812084 + MIR SINE MIR 53 256 -6 589 93 50 86 chr5 133819058 133819105 -65811045 - L1MB3 LINE L1 0 6183 6136 2082 125 10 10 chr5 133819105 133819410 -65810740 - AluSx SINE Alu -7 305 1 589 93 50 86 chr5 133819410 133819501 -65810649 - L1MB3 LINE L1 -47 6136 6050 31 44 0 0 chr5 133819509 133819554 -65810596 + AT_rich Low_complexity Low_complexity 1 45 0 1230 164 135 66 chr5 133819685 133819959 -65810191 + AluJo SINE Alu 3 295 -17 5157 185 35 22 chr5 133820264 133822415 -65807735 - L1MB4 LINE L1 -13 6167 3989 1348 194 41 75 chr5 133822674 133822743 -65807407 - MLT1A2 LTR MaLR 0 374 304 1650 197 0 13 chr5 133822743 133823043 -65807107 + AluJb SINE Alu 1 296 -16 1348 194 41 75 chr5 133823043 133823360 -65806790 - MLT1A2 LTR MaLR -70 304 1 278 149 43 0 chr5 133823903 133823950 -65806200 - L2 LINE L2 0 3313 3265 1937 98 49 4 chr5 133823989 133824276 -65805874 - AluSc SINE Alu 0 299 1 195 42 0 0 chr5 133824295 133824319 -65805831 + (CAGGA)n Simple_repeat Simple_repeat 5 28 0 1545 204 3 16 chr5 133824325 133824629 -65805521 + AluJo SINE Alu 13 312 0 306 271 108 69 chr5 133824788 133824891 -65805259 + L1ME4a LINE L1 6063 6161 -240 2298 101 0 3 chr5 133824891 133825188 -65804962 + AluSq SINE Alu 1 296 -17 306 271 108 69 chr5 133825188 133825372 -65804778 + L1ME4a LINE L1 6161 6361 -40 2239 94 7 13 chr5 133825376 133825675 -65804475 - AluSg SINE Alu -13 297 1 936 127 69 11 chr5 133826674 133826863 -65803287 + Tigger2 DNA MER2_type 1 200 -2518 658 194 8 15 chr5 133826867 133827001 -65803149 + FLAM_A SINE Alu 7 139 -3 1636 164 43 3 chr5 133827007 133827336 -65802814 + Tigger2 DNA MER2_type 201 542 -2176 1527 98 0 47 chr5 133827338 133827587 -65802563 + AluY SINE Alu 77 315 0 862 149 0 21 chr5 133827598 133827739 -65802411 + FRAM SINE Alu 38 175 -1 8788 139 30 31 chr5 133827751 133828655 -65801495 + Tigger2 DNA MER2_type 546 1450 -1268 1895 124 78 0 chr5 133828655 133828937 -65801213 - AluSg SINE Alu -6 304 1 8788 139 30 31 chr5 133828937 133829429 -65800721 + Tigger2 DNA MER2_type 1450 1942 -776 2074 87 0 4 chr5 133829429 133829695 -65800455 + AluY SINE Alu 36 300 -11 8788 139 30 31 chr5 133829695 133829923 -65800227 + Tigger2 DNA MER2_type 1942 2169 -549 614 133 133 28 chr5 133829923 133830066 -65800084 + LTR8A LTR ERV1 1 158 -569 261 0 0 0 chr5 133830542 133830571 -65799579 + (A)n Simple_repeat Simple_repeat 1 29 0 2200 193 82 11 chr5 133831838 133832377 -65797773 + LTR8A LTR ERV1 151 727 0 3121 182 106 47 chr5 133832377 133832853 -65797297 + HUERS-P1 LTR ERV1 1 447 -5816 300 27 0 0 chr5 133832853 133832890 -65797260 + (TG)n Simple_repeat Simple_repeat 2 38 0 3121 182 106 47 chr5 133832890 133833553 -65796597 + HUERS-P1 LTR ERV1 447 1347 -4916 1065 166 18 9 chr5 133833559 133833843 -65796307 + HUERS-P1 LTR ERV1 355 1482 -4464 * 11029 104 39 33 chr5 133833840 133834366 -65795784 + MER83B-int LTR ERV1 768 1289 -3591 2245 113 0 10 chr5 133834366 133834675 -65795475 - AluSx SINE Alu -6 306 1 11029 104 39 33 chr5 133834675 133836022 -65794128 + MER83B-int LTR ERV1 1289 3329 -1551 1689 154 4 8 chr5 133836022 133836289 -65793861 + AluJo SINE Alu 38 303 -9 374 262 78 53 chr5 133836293 133836499 -65793651 + L1ME4a LINE L1 5754 5964 -157 385 288 5 27 chr5 133836520 133836704 -65793446 + (TA)n Simple_repeat Simple_repeat 1 180 0 192 344 43 21 chr5 133836788 133836881 -65793269 - MIR SINE MIR -111 151 57 23 0 0 0 chr5 133837199 133837222 -65792928 + AT_rich Low_complexity Low_complexity 1 23 0 2193 109 7 3 chr5 133837228 133837522 -65792628 - AluSg SINE Alu -15 295 1 2158 91 49 0 chr5 133837533 133837820 -65792330 - AluY SINE Alu -10 301 1 438 271 234 9 chr5 133838164 133838378 -65791772 + MIR SINE MIR 1 262 0 252 310 97 35 chr5 133838804 133838949 -65791201 + L2 LINE L2 3148 3301 -12 300 27 0 0 chr5 133839201 133839238 -65790912 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2009 113 4 4 chr5 133839248 133839522 -65790628 - AluSx SINE Alu -38 274 1 1238 194 132 32 chr5 133839603 133840036 -65790114 + L1M4 LINE L1 2501 2976 -3170 2188 132 3 0 chr5 133840038 133840348 -65789802 + AluSx SINE Alu 1 311 -1 669 254 66 0 chr5 133840348 133840529 -65789621 - MER58A DNA MER1_type -31 193 1 2662 231 38 93 chr5 133840607 133841806 -65788344 + L1M4 LINE L1 3254 4385 -1761 1990 144 0 26 chr5 133844678 133844990 -65785160 - AluJb SINE Alu -8 304 1 2122 141 0 0 chr5 133845388 133845700 -65784450 + AluSq SINE Alu 1 312 -1 2000 144 0 10 chr5 133846067 133846372 -65783778 + AluJb SINE Alu 1 302 -10 222 350 113 38 chr5 133846927 133847087 -65783063 + L2 LINE L2 3096 3267 -5 931 171 42 164 chr5 133847145 133847501 -65782649 + L1ME1 LINE L1 5783 6181 15 2065 125 3 14 chr5 133847501 133847660 -65782490 - AluSx SINE Alu -19 293 137 2178 87 31 3 chr5 133847660 133847947 -65782203 - AluY SINE Alu -16 295 1 2065 125 3 14 chr5 133847947 133848083 -65782067 - AluSx SINE Alu -175 137 1 931 171 42 164 chr5 133848083 133848110 -65782040 + L1ME1 LINE L1 6181 6111 -55 1708 178 0 7 chr5 133848110 133848386 -65781764 + AluJb SINE Alu 1 274 -38 931 171 42 164 chr5 133848386 133848434 -65781716 + L1ME1 LINE L1 6110 6162 -4 365 259 37 37 chr5 133848665 133848773 -65781377 - MIR SINE MIR -34 228 121 2232 102 3 13 chr5 133850040 133850344 -65779806 - AluY SINE Alu -10 301 1 29 70 0 0 chr5 133850522 133850579 -65779571 + AT_rich Low_complexity Low_complexity 1 57 0 460 308 26 19 chr5 133850989 133851145 -65779005 + MIR3 SINE MIR 40 196 -12 610 206 188 0 chr5 133851649 133851809 -65778341 + MER3 DNA MER1_type 1 190 -19 780 145 8 38 chr5 133852273 133852404 -65777746 + FLAM_C SINE Alu 1 127 -16 454 157 0 150 chr5 133852815 133852968 -65777182 + MER106A DNA MER1_type 107 236 0 587 311 159 35 chr5 133852968 133853483 -65776667 + HAL1 LINE L1 747 1325 -1182 226 274 111 34 chr5 133853533 133853767 -65776383 + HAL1 LINE L1 2255 2506 -1 21 0 0 0 chr5 133853772 133853793 -65776357 + AT_rich Low_complexity Low_complexity 1 21 0 2165 130 7 0 chr5 133854071 133854364 -65775786 + AluSx SINE Alu 1 295 -17 552 216 24 8 chr5 133854798 133854923 -65775227 + MER2 DNA MER2_type 7 133 -212 1290 240 40 48 chr5 133855026 133855524 -65774626 - L1ME3A LINE L1 -85 6085 5593 11579 177 39 31 chr5 133855524 133856480 -65773670 + ERVL-C1 LTR ERVL 2904 3851 -1913 2447 73 0 3 chr5 133856480 133856780 -65773370 - AluY SINE Alu -12 299 1 11579 177 39 31 chr5 133856780 133856849 -65773301 + ERVL-C1 LTR ERVL 3851 3918 -1846 3166 81 29 9 chr5 133856849 133857293 -65772857 - MLT2A2 LTR ERVL 0 453 1 11579 177 39 31 chr5 133857293 133857332 -65772818 + ERVL-C1 LTR ERVL 3918 3955 -1809 2000 136 7 7 chr5 133857332 133857626 -65772524 - AluJb SINE Alu -14 298 5 11579 177 39 31 chr5 133857626 133858999 -65771151 + ERVL-C1 LTR ERVL 3955 5363 -401 1386 188 65 3 chr5 133858996 133859289 -65770861 + ERVL-C1 LTR ERVL 5443 5753 -11 * 1381 167 41 70 chr5 133859292 133859634 -65770516 + MLT2C1 LTR ERVL 1 332 -65 308 241 96 0 chr5 133859638 133859721 -65770429 - L1MEd LINE L1 -4969 1150 1060 2651 190 13 36 chr5 133859920 133860383 -65769767 + MLT2B2 LTR ERVL 1 452 -63 2284 81 7 17 chr5 133860383 133860681 -65769469 + AluY SINE Alu 1 295 -16 2651 190 13 36 chr5 133860681 133860744 -65769406 + MLT2B2 LTR ERVL 452 515 0 518 302 108 14 chr5 133861052 133861264 -65768886 + MIR SINE MIR 20 251 -11 785 169 7 45 chr5 133861474 133861628 -65768522 - FRAM SINE Alu -18 158 11 532 276 102 25 chr5 133862024 133862220 -65767930 - MIR SINE MIR 0 262 52 431 189 0 0 chr5 133862373 133862447 -65767703 + AluJ/FLAM SINE Alu 1 74 -238 297 155 0 0 chr5 133862447 133862505 -65767645 + GA-rich Low_complexity Low_complexity 6 63 0 1056 192 0 0 chr5 133862736 133862903 -65767247 - AluSg/x SINE Alu -11 301 135 2888 0 0 0 chr5 133862903 133863212 -65766938 - AluYa5 SINE Alu -2 309 1 2183 99 0 48 chr5 133863212 133863524 -65766626 - AluSx SINE Alu -15 297 1 11160 158 41 14 chr5 133863524 133864768 -65765382 - L1 LINE L1 -2356 5209 4000 1559 174 71 17 chr5 133864768 133865062 -65765088 - AluJb SINE Alu -2 310 1 11160 158 41 14 chr5 133865062 133867286 -65762864 - L1 LINE L1 -3565 4000 1639 1616 177 3 28 chr5 133867370 133867659 -65762491 + AluJo SINE Alu 1 312 0 216 0 67 0 chr5 133867659 133867689 -65762461 + (CAAAA)n Simple_repeat Simple_repeat 2 180 0 755 273 116 62 chr5 133867715 133868041 -65762109 + L1MEd LINE L1 895 1202 -4927 1519 200 0 47 chr5 133868041 133868341 -65761809 + AluJo SINE Alu 1 286 -26 755 273 116 62 chr5 133868341 133868438 -65761712 + L1MEd LINE L1 1202 1292 -4837 2242 155 164 46 chr5 133868438 133868979 -65761171 - MER77 LTR ERV1 0 605 1 755 273 116 62 chr5 133868979 133869229 -65760921 + L1MEd LINE L1 1292 1527 -4602 928 118 0 15 chr5 133869229 133869364 -65760786 - FLAM_C SINE Alu 0 133 1 755 273 116 62 chr5 133869364 133869689 -65760461 + L1MEd LINE L1 1527 1833 -4296 1854 161 35 27 chr5 133869689 133870061 -65760089 + THE1C LTR MaLR 1 375 0 755 273 116 62 chr5 133870061 133870132 -65760018 + L1MEd LINE L1 1833 1899 -4230 1650 190 31 10 chr5 133870132 133870422 -65759728 - AluJo SINE Alu -16 296 1 755 273 116 62 chr5 133870422 133870951 -65759199 + L1MEd LINE L1 1899 2561 -3568 1009 128 64 6 chr5 133871034 133871190 -65758960 + FRAM SINE Alu 1 160 -16 627 271 86 41 chr5 133871232 133871300 -65758850 + HAL1 LINE L1 1045 1109 -1398 1836 133 3 40 chr5 133871300 133871601 -65758549 - AluJb SINE Alu -22 290 1 627 271 86 41 chr5 133871601 133871871 -65758279 + HAL1 LINE L1 1109 1398 -1109 433 280 19 10 chr5 133871902 133872109 -65758041 + L1MEd LINE L1 2771 2979 -3150 1466 256 94 4 chr5 133872172 133872726 -65757424 + HAL1 LINE L1 1386 1989 -518 783 244 85 52 chr5 133872757 133873122 -65757028 + MLT1B LTR MaLR 1 377 -13 1029 175 0 48 chr5 133873245 133873434 -65756716 + AluJb SINE Alu 1 180 -132 299 337 0 11 chr5 133873777 133873872 -65756278 + MLT1K LTR MaLR 133 226 -362 2082 129 0 0 chr5 133874093 133874372 -65755778 - AluSx SINE Alu -18 294 16 1540 196 7 28 chr5 133874457 133874743 -65755407 + AluJo SINE Alu 1 280 -32 243 0 0 0 chr5 133874743 133874770 -65755380 + (CAAT)n Simple_repeat Simple_repeat 4 30 0 2682 69 20 3 chr5 133874840 133875189 -65754961 - THE1A LTR MaLR 0 355 1 10678 95 14 7 chr5 133875189 133876712 -65753438 - THE1A-int LTR MaLR 0 1580 46 2098 77 3 10 chr5 133876713 133877011 -65753139 - THE1A LTR MaLR -59 296 1 4751 146 52 63 chr5 133877383 133878741 -65751409 - L1MA9 LINE L1 0 6312 4969 2159 85 17 7 chr5 133878785 133879078 -65751072 - AluY SINE Alu -14 297 2 335 148 159 11 chr5 133879087 133879175 -65750975 - L1PA13 LINE L1 -5 6158 6058 1498 78 0 0 chr5 133879275 133879454 -65750696 - AluY SINE Alu -132 179 1 17513 181 25 12 chr5 133879463 133885004 -65745146 - L1PA13 LINE L1 -4 6810 1194 3435 186 68 13 chr5 133885004 133885566 -65744584 - L1MA9 LINE L1 -1351 4795 4167 1800 104 127 0 chr5 133885566 133885826 -65744324 - AluSc SINE Alu -6 293 1 3435 186 68 13 chr5 133885826 133886128 -65744022 - L1MA9 LINE L1 -1979 4167 3883 463 234 47 39 chr5 133886138 133886394 -65743756 - L1M4c LINE L1 -4097 2287 2030 5249 192 28 6 chr5 133886410 133887451 -65742699 - MSTA-int LTR MaLR -587 1064 1 1894 157 146 8 chr5 133887451 133887827 -65742323 - MSTA LTR MaLR 0 428 1 1585 267 24 13 chr5 133887829 133888293 -65741857 + L1MEc LINE L1 238 706 -5857 8723 203 54 36 chr5 133888553 133888642 -65741508 + L1MEc LINE L1 636 722 -5660 2436 90 0 10 chr5 133888642 133888954 -65741196 + AluY SINE Alu 1 309 -2 8723 203 54 36 chr5 133888954 133890207 -65739943 + L1MEc LINE L1 722 1951 -4431 1415 220 59 0 chr5 133890207 133890480 -65739670 + AluJb SINE Alu 1 289 -23 8723 203 54 36 chr5 133890480 133892682 -65737468 + L1MEc LINE L1 1951 4243 -2139 1487 124 28 43 chr5 133892682 133892964 -65737186 + MSTA LTR MaLR 1 278 -150 523 70 0 0 chr5 133893231 133893302 -65736848 + MSTA LTR MaLR 358 428 0 678 170 88 18 chr5 133893302 133893473 -65736677 + L1MEc LINE L1 4239 4421 -1961 2480 194 20 2 chr5 133893580 133894138 -65736012 + L1MEc LINE L1 4723 5290 -1092 1103 198 9 39 chr5 133894143 133894375 -65735775 + AluJb SINE Alu 87 311 -1 532 271 5 5 chr5 133894375 133894567 -65735583 + L1MEc LINE L1 5289 5480 -902 788 175 19 45 chr5 133895198 133895352 -65734798 - MER2 DNA MER2_type -195 150 1 2031 198 53 22 chr5 133895352 133895509 -65734641 + L1MB7 LINE L1 5643 5794 -390 2231 120 41 19 chr5 133895509 133895876 -65734274 + THE1C LTR MaLR 1 375 0 2031 198 53 22 chr5 133895876 133896224 -65733926 + L1MB7 LINE L1 5794 6164 -20 4873 166 40 5 chr5 133896834 133897917 -65732233 + L1MB3 LINE L1 5062 6176 -7 315 250 9 23 chr5 133898799 133899012 -65731138 + GA-rich Low_complexity Low_complexity 1 210 0 187 259 7 7 chr5 133899027 133899162 -65730988 + GA-rich Low_complexity Low_complexity 2 136 0 202 240 155 54 chr5 133899578 133899707 -65730443 + MIR SINE MIR 120 261 -1 256 274 57 19 chr5 133899918 133900024 -65730126 + LTR16B LTR ERVL 204 313 -151 23 0 0 0 chr5 133900184 133900207 -65729943 + AT_rich Low_complexity Low_complexity 1 23 0 902 50 0 0 chr5 133900359 133900478 -65729672 - L1PA4 LINE L1 0 6155 6037 1479 265 35 48 chr5 133900765 133901622 -65728528 + L1PA13 LINE L1 403 1533 -5254 3560 128 20 3 chr5 133901634 133902655 -65727495 + L1P4 LINE L1 4786 5820 -345 11685 177 32 34 chr5 133902674 133902717 -65727433 - L1 LINE L1 -1135 5713 5671 2436 154 31 7 chr5 133902717 133903133 -65727017 + MSTA LTR MaLR 1 426 -2 11685 177 32 34 chr5 133903133 133903843 -65726307 - L1 LINE L1 -1177 5671 4961 2166 114 0 13 chr5 133903843 133904149 -65726001 - AluSg1 SINE Alu -7 302 1 2211 124 3 3 chr5 133904157 133904464 -65725686 - AluSx SINE Alu -5 307 1 11685 177 32 34 chr5 133904464 133904511 -65725639 - L1 LINE L1 -1894 4954 4908 2173 113 3 7 chr5 133904511 133904804 -65725346 + AluSc SINE Alu 1 292 -17 11685 177 32 34 chr5 133904804 133906105 -65724045 - L1 LINE L1 -1940 4908 3606 1673 186 0 17 chr5 133906105 133906401 -65723749 - AluJo SINE Alu -21 291 1 11685 177 32 34 chr5 133906401 133907075 -65723075 - L1 LINE L1 -3242 3606 2932 2167 118 48 22 chr5 133907075 133907430 -65722720 + THE1B LTR MaLR 1 364 0 11685 177 32 34 chr5 133907430 133908627 -65721523 - L1 LINE L1 -3916 2932 1737 2270 95 0 0 chr5 133908627 133908921 -65721229 - AluY SINE Alu -17 294 1 11685 177 32 34 chr5 133908921 133910091 -65720059 - L1 LINE L1 -5111 1737 566 465 345 98 0 chr5 133910322 133910586 -65719564 + L2 LINE L2 1635 1924 -1390 5495 162 15 45 chr5 133910606 133911503 -65718647 - L1MC1 LINE L1 -6 6607 5685 1668 197 21 3 chr5 133911503 133911787 -65718363 - AluJb SINE Alu -23 289 1 5495 162 15 45 chr5 133911787 133911980 -65718170 - L1MC1 LINE L1 -928 5685 5488 1151 191 152 8 chr5 133911980 133912237 -65717913 - AluJb SINE Alu -8 294 1 5495 162 15 45 chr5 133912237 133912905 -65717245 - L1MC1 LINE L1 -1125 5488 4910 2369 170 51 56 chr5 133912918 133913452 -65716698 - L1MC1 LINE L1 -5876 550 20 779 149 0 7 chr5 133913478 133913619 -65716531 + L1MA3 LINE L1 6163 6302 -3 503 311 135 26 chr5 133913668 133914282 -65715868 + L2 LINE L2 1937 2675 -639 185 212 0 0 chr5 133914376 133914409 -65715741 + MIR SINE MIR 112 144 -118 5543 60 18 0 chr5 133914417 133915181 -65714969 + L1P LINE L1 1 778 -5368 26457 35 2 0 chr5 133915281 133921179 -65708971 + L1PA4 LINE L1 246 6152 -3 1822 176 10 3 chr5 133921386 133921692 -65708458 + AluJb SINE Alu 1 308 -4 1369 206 23 19 chr5 133921799 133922061 -65708089 + Tigger7 DNA MER2_type 5 267 -466 582 91 114 23 chr5 133922059 133922147 -65708003 + Tigger7 DNA MER2_type 2391 2486 -1 * 2378 79 0 0 chr5 133922308 133922599 -65707551 + AluY SINE Alu 1 291 -20 1738 167 3 26 chr5 133922610 133922915 -65707235 + AluJo SINE Alu 1 298 -14 297 340 53 25 chr5 133923380 133923426 -65706724 + L2 LINE L2 1597 1640 -1674 623 98 0 22 chr5 133923426 133923518 -65706632 - L1PB3 LINE L1 0 6154 6065 297 340 53 25 chr5 133923518 133923756 -65706394 + L2 LINE L2 1640 1889 -1425 244 118 0 0 chr5 133923869 133923903 -65706247 - L2 LINE L2 -11 3302 3269 2022 113 0 57 chr5 133923942 133924120 -65706030 - AluSx SINE Alu -12 300 146 2340 59 0 46 chr5 133924120 133924425 -65705725 - AluSq SINE Alu -22 291 1 2022 113 0 57 chr5 133924425 133924564 -65705586 - AluSx SINE Alu -166 146 1 211 320 13 13 chr5 133924696 133924774 -65705376 + L2 LINE L2 2729 2806 -508 950 136 15 65 chr5 133924832 133925031 -65705119 - MER53 DNA DNA 0 189 1 191 326 7 96 chr5 133925067 133925202 -65704948 - L2 LINE L2 -753 2561 2439 923 293 55 30 chr5 133925268 133925671 -65704479 + L2 LINE L2 1922 2334 -980 862 257 64 5 chr5 133925673 133925953 -65704197 - L1ME3 LINE L1 0 6170 5857 996 253 116 17 chr5 133925961 133926305 -65703845 + L2 LINE L2 2332 2709 -605 229 172 103 0 chr5 133926560 133926618 -65703532 - MER3 DNA MER1_type -17 192 129 1503 252 66 25 chr5 133926621 133927197 -65702953 + L2 LINE L2 2702 3313 0 388 243 28 28 chr5 133927211 133927318 -65702832 - L2 LINE L2 -979 2335 2229 204 353 93 14 chr5 133927468 133927607 -65702543 + L2 LINE L2 3164 3313 0 9047 149 27 27 chr5 133927612 133929149 -65701001 + L1M1 LINE L1 14 1551 -6014 8603 69 20 1 chr5 133980556 133981840 -65648310 + L1P LINE L1 2467 3775 -2371 22 0 0 0 chr5 133982135 133982157 -65647993 + AT_rich Low_complexity Low_complexity 1 22 0 222 343 190 4 chr5 133982743 133982985 -65647165 + L2 LINE L2 2241 2527 -787 416 204 87 68 chr5 133983024 133983127 -65647023 + L2 LINE L2 3208 3312 -1 362 184 11 58 chr5 133983504 133983591 -65646559 - MIR SINE MIR -56 206 124 2076 118 7 10 chr5 133983617 133983921 -65646229 + AluSx SINE Alu 1 303 -9 583 331 61 18 chr5 133984321 133984714 -65645436 + MLT1K LTR MaLR 175 584 -4 367 266 93 53 chr5 133985003 133985294 -65644856 + MLT1L LTR MaLR 110 402 -109 325 308 48 0 chr5 133985321 133985425 -65644725 + L1MC4a LINE L1 5154 5262 -884 2385 211 18 22 chr5 133985428 133986030 -65644120 + L1MC4a LINE L1 5357 5956 -1852 12947 133 11 26 chr5 133986138 133988417 -65641733 - L1P LINE L1 -3890 2256 11 3060 153 41 38 chr5 133988426 133989539 -65640611 + L1MA2 LINE L1 3123 4251 -3314 8370 193 41 50 chr5 133989551 133991208 -65638942 + L1PA13 LINE L1 2 1639 -5148 2178 113 14 165 chr5 133991208 133991509 -65638641 + MSTA LTR MaLR 1 197 -231 1890 159 7 13 chr5 133991509 133991811 -65638339 + AluSx SINE Alu 2 301 -11 2178 113 14 165 chr5 133991811 133992013 -65638137 + MSTA LTR MaLR 197 428 0 8370 193 41 50 chr5 133992013 133992413 -65637737 + L1PA13 LINE L1 1639 2041 -4746 655 172 19 32 chr5 133992544 133992701 -65637449 + L1PA15 LINE L1 6004 6158 -7 10526 150 35 12 chr5 133992705 133993248 -65636902 + L1MA2 LINE L1 4248 4777 -2946 2323 71 4 0 chr5 133993248 133993548 -65636602 + AluSg SINE Alu 1 301 0 10526 150 35 12 chr5 133993548 133996389 -65633761 + L1MA2 LINE L1 4777 7721 -2 21 0 0 0 chr5 133996444 133996465 -65633685 + AT_rich Low_complexity Low_complexity 1 21 0 201 344 141 8 chr5 133997327 133997455 -65632695 + L2 LINE L2 3169 3313 0 438 322 38 27 chr5 133997934 133998117 -65632033 + MIR SINE MIR 1 185 -77 249 150 0 0 chr5 133998137 133998212 -65631938 - Alu SINE Alu 0 317 243 2345 136 8 0 chr5 133999728 134000089 -65630061 + MSTC LTR MaLR 1 364 -64 916 129 15 0 chr5 134000089 134000221 -65629929 + FRAM SINE Alu 1 132 -44 840 89 8 253 chr5 134000323 134000377 -65629773 + MSTA LTR MaLR 235 300 -128 1801 157 13 13 chr5 134000377 134000677 -65629473 + AluJb SINE Alu 2 301 -11 840 89 8 253 chr5 134000677 134000879 -65629271 + MSTA LTR MaLR 300 428 0 5027 241 33 37 chr5 134000889 134002753 -65627397 + L1PA15 LINE L1 999 2854 -3292 313 106 0 0 chr5 134002746 134002793 -65627357 - L1PA7 LINE L1 -603 5569 5523 * 4577 41 20 0 chr5 134002794 134003353 -65626797 + L1PA7 LINE L1 5572 6141 -13 2029 203 35 2 chr5 134003380 134003916 -65626234 + L1PA15 LINE L1 2849 3402 -2744 5404 129 20 6 chr5 134003952 134005240 -65624910 + L1PA15 LINE L1 4844 6158 -7 1658 194 68 17 chr5 134005244 134005760 -65624390 + L1 LINE L1 2829 3370 -2776 616 51 13 0 chr5 134005812 134005891 -65624259 + AluSg1 SINE Alu 1 80 -229 447 302 62 22 chr5 134008466 134008741 -65621409 + Charlie8 DNA MER1_type 1 286 -2131 288 335 66 62 chr5 134009185 134009412 -65620738 + MIR SINE MIR 5 232 -30 270 296 52 0 chr5 134009655 134009770 -65620380 + L1ME4a LINE L1 5609 5729 -392 350 248 113 23 chr5 134009792 134009925 -65620225 + L1ME4a LINE L1 5960 6104 -17 181 273 231 42 chr5 134009956 134010099 -65620051 - L3 LINE CR1 -31 1546 1377 188 211 192 0 chr5 134010362 134010414 -65619736 + L3 LINE CR1 1046 1107 -470 268 361 103 0 chr5 134010547 134010702 -65619448 - L3 LINE CR1 -343 1234 1064 1492 162 128 3 chr5 134010817 134011138 -65619012 - MER46B DNA MER2_type 0 236 1 839 242 26 0 chr5 134012960 134013154 -65616996 - MER3 DNA MER1_type -2 207 9 1687 70 0 24 chr5 134013929 134014142 -65616008 - AluSp SINE Alu -105 208 1 283 100 0 0 chr5 134014916 134014956 -65615194 - MER103 DNA DNA -63 103 64 51 0 0 0 chr5 134014962 134015013 -65615137 + AT_rich Low_complexity Low_complexity 1 51 0 201 147 0 0 chr5 134015621 134015655 -65614495 + (CAT)n Simple_repeat Simple_repeat 2 35 0 24 32 0 0 chr5 134015724 134015755 -65614395 + AT_rich Low_complexity Low_complexity 1 31 0 480 48 0 0 chr5 134016078 134016141 -65614009 + (TG)n Simple_repeat Simple_repeat 2 64 0 24 0 0 0 chr5 134016201 134016225 -65613925 + AT_rich Low_complexity Low_complexity 1 24 0 224 294 92 34 chr5 134016307 134016426 -65613724 + MIR SINE MIR 137 262 0 397 300 45 0 chr5 134016453 134016563 -65613587 + L2 LINE L2 3142 3256 -16 33 66 0 0 chr5 134017038 134017099 -65613051 + AT_rich Low_complexity Low_complexity 1 61 0 2028 53 3 115 chr5 134018919 134019240 -65610910 - AluY SINE Alu -1 310 26 251 207 73 24 chr5 134019251 134019333 -65610817 - L1M4 LINE L1 -1446 4700 4615 251 335 85 0 chr5 134019496 134019660 -65610490 - MER5B DNA MER1_type 0 178 1 2118 70 0 0 chr5 134020088 134020344 -65609806 - AluY SINE Alu 0 311 56 483 33 0 0 chr5 134020422 134020483 -65609667 + (TG)n Simple_repeat Simple_repeat 2 62 0 206 363 30 0 chr5 134021310 134021445 -65608705 + L2 LINE L2 2006 2144 -1170 1342 278 38 5 chr5 134022189 134022588 -65607562 + LTR16A LTR ERVL 33 444 -6 4284 190 120 4 chr5 134022603 134023615 -65606535 + HERV16 LTR ERVL 10 1138 -3858 758 189 77 0 chr5 134023681 134023850 -65606300 + HERV16 LTR ERVL 1253 1434 -3562 5634 220 101 23 chr5 134023900 134025372 -65604778 + HERV16 LTR ERVL 1573 3207 -1900 891 283 70 30 chr5 134025401 134025804 -65604346 + HERV16 LTR ERVL 3280 3698 -2066 761 404 16 8 chr5 134025803 134026439 -65603711 + HERV16 LTR ERVL 4250 4890 -595 * 260 262 221 0 chr5 134026917 134027089 -65603061 - MER63A DNA MER1_type 0 210 1 1437 214 95 0 chr5 134027223 134027529 -65602621 + LTR16A LTR ERVL 116 491 0 331 235 235 0 chr5 134030045 134030147 -65600003 + L2 LINE L2 3188 3313 0 2320 87 0 7 chr5 134030706 134031004 -65599146 - AluY SINE Alu -15 296 1 1549 257 30 45 chr5 134031067 134031245 -65598905 + L1ME3 LINE L1 5594 5773 -389 1758 174 3 26 chr5 134031245 134031556 -65598594 - AluJo SINE Alu -8 304 1 1549 257 30 45 chr5 134031556 134031953 -65598197 + L1ME3 LINE L1 5773 6160 -2 269 211 45 0 chr5 134034623 134034700 -65595450 - MIR SINE MIR -76 132 61 22 0 0 0 chr5 134039518 134039540 -65590610 + AT_rich Low_complexity Low_complexity 1 22 0 209 106 0 21 chr5 134039576 134039623 -65590527 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 249 346 77 0 chr5 134044171 134044275 -65585875 - L2 LINE L2 -2 3311 3200 414 343 18 18 chr5 134046138 134046307 -65583843 + MER5A DNA MER1_type 2 170 -19 420 275 37 122 chr5 134046418 134046607 -65583543 + L1MEd LINE L1 1061 1233 -4886 242 287 61 33 chr5 134046640 134046821 -65583329 + L1MC/D LINE L1 5702 5887 -1921 2038 180 12 0 chr5 134047074 134047474 -65582676 - L1MB2 LINE L1 -1 6170 5766 3558 244 79 18 chr5 134047529 134048915 -65581235 - L1M4 LINE L1 -3852 2530 1052 1107 278 45 34 chr5 134049206 134049562 -65580588 - L1M4 LINE L1 -5523 780 421 895 328 29 23 chr5 134050724 134051659 -65578491 + HERV16 LTR ERVL 1640 2863 -2901 265 214 0 0 chr5 134051775 134051845 -65578305 - L1MC5 LINE L1 -129 7832 7763 879 334 48 62 chr5 134051949 134052356 -65577794 + HERV16 LTR ERVL 3051 3462 -2302 1817 130 60 33 chr5 134052356 134052656 -65577494 + AluJb SINE Alu 1 308 -4 879 334 48 62 chr5 134052656 134053110 -65577040 + HERV16 LTR ERVL 3462 3900 -1864 1271 176 4 16 chr5 134053272 134053516 -65576634 + MER96B DNA MER1_type? 7 247 -170 454 275 25 0 chr5 134053715 134053835 -65576315 + MER94 DNA DNA 6 128 -6 260 279 198 0 chr5 134056836 134056922 -65573228 + MIR SINE MIR 15 117 -145 236 279 213 52 chr5 134057048 134057335 -65572815 - L2 LINE L2 -432 2882 2550 2315 108 0 3 chr5 134057821 134058128 -65572022 + AluSx SINE Alu 1 306 -6 719 167 26 116 chr5 134058128 134058437 -65571713 - L1M LINE L1 -847 5299 5033 * 3523 247 59 10 chr5 134058421 134058989 -65571161 - L1M4 LINE L1 -2847 3535 2996 1653 199 23 7 chr5 134058989 134059296 -65570854 + AluJo SINE Alu 1 312 0 3523 247 59 10 chr5 134059296 134060247 -65569903 - L1M4 LINE L1 -3386 2996 1945 1937 121 29 60 chr5 134060449 134060763 -65569387 - AluSx SINE Alu -8 304 1 307 300 222 0 chr5 134060763 134060993 -65569157 - L1M4 LINE L1 -2127 4019 3739 321 351 101 12 chr5 134061092 134061260 -65568890 + L2 LINE L2 3073 3255 -17 258 352 9 19 chr5 134062136 134062241 -65567909 - L2 LINE L2 0 3313 3210 1396 130 8 46 chr5 134062463 134062702 -65567448 - MER30 DNA MER1_type 0 230 1 201 74 0 0 chr5 134065705 134065732 -65564418 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 2325 258 62 22 chr5 134066667 134067616 -65562534 - L2 LINE L2 0 3313 2323 254 172 247 0 chr5 134067599 134067692 -65562458 + MIR SINE MIR 136 251 -11 * 353 131 66 0 chr5 134068125 134068186 -65561964 - MIR SINE MIR -92 170 106 304 283 0 40 chr5 134068181 134068280 -65561870 + MIR SINE MIR 168 262 0 * 1507 82 111 0 chr5 134068977 134069184 -65560966 - MER30 DNA MER1_type 0 230 1 305 297 172 7 chr5 134070559 134070704 -65559446 + L2 LINE L2 2545 2713 -601 632 237 137 32 chr5 134070706 134070812 -65559338 + L2 LINE L2 2994 3088 -225 1238 130 47 16 chr5 134070812 134071004 -65559146 - L1PB4 LINE L1 -2 6154 5957 632 237 137 32 chr5 134071004 134071175 -65558975 + L2 LINE L2 3088 3300 -13 297 0 0 0 chr5 134071175 134071208 -65558942 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 193 345 147 17 chr5 134072032 134072209 -65557941 + MIR SINE MIR 13 212 -50 199 363 30 0 chr5 134072811 134072946 -65557204 + L2 LINE L2 2006 2144 -1170 1444 271 38 5 chr5 134073690 134074089 -65556061 + LTR16A LTR ERVL 33 444 -6 4403 188 119 4 chr5 134074097 134075116 -65555034 + HERV16 LTR ERVL 3 1138 -3858 777 189 77 0 chr5 134075182 134075351 -65554799 + HERV16 LTR ERVL 1253 1434 -3562 5881 236 93 22 chr5 134075401 134077304 -65552846 + HERV16 LTR ERVL 1573 3698 -2066 1023 403 17 8 chr5 134077297 134077939 -65552211 + HERV16 LTR ERVL 4243 4890 -595 * 311 262 221 0 chr5 134078416 134078588 -65551562 - MER63A DNA MER1_type 0 210 1 1518 208 95 0 chr5 134078722 134079028 -65551122 + LTR16A LTR ERVL 116 491 0 310 235 235 0 chr5 134081545 134081647 -65548503 + L2 LINE L2 3188 3313 0 2180 91 0 7 chr5 134082206 134082504 -65547646 - AluY SINE Alu -15 296 1 1604 257 30 45 chr5 134082567 134082745 -65547405 + L1ME3 LINE L1 5594 5773 -389 1655 174 3 26 chr5 134082745 134083056 -65547094 - AluJo SINE Alu -8 304 1 1604 257 30 45 chr5 134083056 134083453 -65546697 + L1ME3 LINE L1 5773 6160 -2 259 211 45 0 chr5 134086115 134086192 -65543958 - MIR SINE MIR -76 132 61 181 189 208 0 chr5 134087559 134087612 -65542538 - L2 LINE L2 -12 3260 3197 22 0 0 0 chr5 134091013 134091035 -65539115 + AT_rich Low_complexity Low_complexity 1 22 0 209 106 0 21 chr5 134091071 134091118 -65539032 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 214 359 87 0 chr5 134095652 134095755 -65534395 - L2 LINE L2 -2 3311 3200 181 299 178 0 chr5 134096628 134096735 -65533415 - MIR SINE MIR -88 174 49 221 340 41 0 chr5 134096980 134097077 -65533073 + MIR SINE MIR 45 145 -63 213 271 99 26 chr5 134097793 134097944 -65532206 - L2 LINE L2 -889 2425 2264 220 247 86 32 chr5 134100265 134100358 -65529792 + MIR SINE MIR 96 193 -69 409 214 12 0 chr5 134101659 134101743 -65528407 - MLT1A1 LTR MaLR -280 85 1 250 322 45 40 chr5 134103230 134103407 -65526743 - L2 LINE L2 -566 2748 2571 390 278 167 0 chr5 134103605 134103767 -65526383 + MIR SINE MIR 47 235 -27 225 83 0 0 chr5 134104121 134104157 -65525993 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 2129 89 24 3 chr5 134105112 134105404 -65524746 + AluSx SINE Alu 1 298 -14 492 291 88 16 chr5 134105965 134106147 -65524003 - MIR SINE MIR -12 250 56 196 222 0 0 chr5 134108136 134108172 -65521978 - L2 LINE L2 -4 3268 3233 378 244 22 0 chr5 134108248 134108338 -65521812 + MER5A DNA MER1_type 16 107 -82 1344 149 0 5 chr5 134108756 134108964 -65521186 + AluJb SINE Alu 84 290 -22 1812 258 67 24 chr5 134109042 134109888 -65520262 + L2 LINE L2 2428 3313 0 201 74 0 0 chr5 134110823 134110850 -65519300 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 1449 127 13 38 chr5 134113833 134114069 -65516081 + MER30 DNA MER1_type 1 230 0 266 362 0 9 chr5 134114291 134114396 -65515754 + L2 LINE L2 3210 3313 0 273 351 101 12 chr5 134115272 134115440 -65514710 - L2 LINE L2 -17 3255 3073 341 285 234 0 chr5 134115539 134115753 -65514397 + L1M4 LINE L1 3739 4002 -2144 1931 133 19 35 chr5 134115769 134116086 -65514064 + AluSx SINE Alu 1 312 0 17104 34 17 0 chr5 134116086 134118874 -65511276 + L1PA4 LINE L1 3348 6151 -4 234 245 53 11 chr5 134119376 134119470 -65510680 - MLT1L LTR MaLR -7 608 511 22 0 0 0 chr5 134119598 134119620 -65510530 + AT_rich Low_complexity Low_complexity 1 22 0 309 135 0 0 chr5 134121125 134121177 -65508973 + (TG)n Simple_repeat Simple_repeat 1 52 0 1053 167 14 47 chr5 134121327 134121542 -65508608 + MER3 DNA MER1_type 2 209 0 5193 128 86 19 chr5 134122037 134122400 -65507750 + Tigger2 DNA MER2_type 631 968 -1750 1998 148 0 13 chr5 134122400 134122705 -65507445 + AluSx SINE Alu 1 301 -11 5193 128 86 19 chr5 134122705 134123271 -65506879 + Tigger2 DNA MER2_type 968 1622 -1096 1552 181 11 18 chr5 134123487 134123764 -65506386 + AluJo SINE Alu 1 275 -37 302 373 78 30 chr5 134124044 134124417 -65505733 + L2 LINE L2 2860 3250 -22 201 254 32 48 chr5 134124421 134124484 -65505666 - L2 LINE L2 -1 3271 3210 804 320 157 7 chr5 134124686 134125314 -65504836 - L2 LINE L2 -37 3276 2543 29577 108 19 51 chr5 134125850 134132219 -65497931 + L1PA7 LINE L1 1 6152 -2 576 246 32 60 chr5 134132242 134132370 -65497780 + L1MCc LINE L1 33 152 -6271 2290 115 0 7 chr5 134132370 134132674 -65497476 + AluSx SINE Alu 1 302 -10 576 246 32 60 chr5 134132674 134132793 -65497357 + L1MCc LINE L1 152 273 -6150 27619 122 18 16 chr5 134132828 134139234 -65490916 - L1PA8 LINE L1 -2 6485 27 469 269 8 22 chr5 134139242 134139376 -65490774 + L1MCc LINE L1 292 423 -6000 2109 132 3 7 chr5 134139507 134139829 -65490321 + AluSx SINE Alu 1 312 0 696 226 85 71 chr5 134139889 134140229 -65489921 + L1MCc LINE L1 871 1215 -5208 1031 33 0 0 chr5 134140317 134140439 -65489711 - L1PA7 LINE L1 -5 6149 6028 250 226 24 0 chr5 134140457 134140541 -65489609 + L1MCc LINE L1 1808 1893 -5048 618 148 157 0 chr5 134140548 134140656 -65489494 + FLAM_C SINE Alu 5 129 -4 46 33 0 0 chr5 134140656 134140716 -65489434 + AT_rich Low_complexity Low_complexity 1 60 0 558 285 17 26 chr5 134140716 134141018 -65489132 + L1MCc LINE L1 1883 2181 -4760 1208 175 18 0 chr5 134141034 134141262 -65488888 - L1MC1 LINE L1 -25 6588 6357 1540 127 0 0 chr5 134141267 134141472 -65488678 + AluSx SINE Alu 5 209 -103 1844 143 6 34 chr5 134141472 134141823 -65488327 - L1MC1 LINE L1 -434 6179 5839 10325 144 107 25 chr5 134141824 134143363 -65486787 - L1MC1 LINE L1 -4000 2426 646 2173 117 0 0 chr5 134143363 134143662 -65486488 - AluSx SINE Alu -13 299 1 10325 144 107 25 chr5 134143662 134144359 -65485791 - L1MC1 LINE L1 -5780 646 7 1461 238 73 15 chr5 134144347 134144763 -65485387 + L1MCc LINE L1 2369 2885 -4237 * 3342 32 2 5 chr5 134144763 134145173 -65484977 + L1PA4 LINE L1 5743 6151 -4 1461 238 73 15 chr5 134145173 134145419 -65484731 + L1MCc LINE L1 2885 3115 -4007 5054 152 7 18 chr5 134145423 134145644 -65484506 + L1MC2 LINE L1 5186 5408 -936 2131 123 0 0 chr5 134145644 134145937 -65484213 + AluSg SINE Alu 1 293 -17 5054 152 7 18 chr5 134145937 134146710 -65483440 + L1MC2 LINE L1 5408 6170 -174 1529 92 0 37 chr5 134146747 134146964 -65483186 + AluSg/x SINE Alu 76 284 -26 708 194 56 0 chr5 134146970 134147150 -65483000 + L1MC2 LINE L1 6155 6344 0 * 2367 199 28 38 chr5 134147144 134147251 -65482899 + L1MCc LINE L1 3065 3172 -3769 222 62 0 0 chr5 134147251 134147283 -65482867 + (TA)n Simple_repeat Simple_repeat 1 32 0 2367 199 28 38 chr5 134147283 134147890 -65482260 + L1MCc LINE L1 3172 3772 -3169 1623 212 138 4 chr5 134147890 134148367 -65481783 + L1MD3 LINE L1 7450 7990 -5 513 304 52 0 chr5 134148382 134148612 -65481538 + L1MCc LINE L1 3770 4011 -2930 * 4220 170 27 18 chr5 134148609 134150304 -65479846 + L1PB1 LINE L1 4436 6143 -8 1163 253 153 11 chr5 134150312 134150862 -65479288 + L1MCc LINE L1 3991 4618 -2323 1176 72 83 0 chr5 134150862 134151042 -65479108 + Tigger1 DNA MER2_type 899 1093 -1325 426 152 0 0 chr5 134151039 134151105 -65479045 + Tigger1 DNA MER2_type 2352 2417 -1 * 936 220 50 32 chr5 134151105 134151382 -65478768 + Charlie2a DNA MER1_type 400 681 -2181 694 169 13 13 chr5 134151460 134151614 -65478536 + Charlie2a DNA MER1_type 629 782 -2080 25 0 0 0 chr5 134152948 134152973 -65477177 + AT_rich Low_complexity Low_complexity 1 25 0 1616 274 56 11 chr5 134152985 134153507 -65476643 + L1ME LINE L1 20 564 -5506 587 153 0 0 chr5 134153509 134153594 -65476556 + AluS SINE Alu 1 85 -227 1120 267 72 31 chr5 134153594 134154216 -65475934 + L1ME LINE L1 556 1188 -4892 * 1339 191 68 3 chr5 134154201 134154526 -65475624 + L1MA5 LINE L1 4748 5093 -1053 6443 42 4 6 chr5 134154575 134155402 -65474748 - L1PA6 LINE L1 -3 6151 5327 5829 115 34 7 chr5 134155435 134156596 -65473554 + L1MA5 LINE L1 5110 6300 0 445 228 211 0 chr5 134157428 134157542 -65472608 + MER5A DNA MER1_type 50 187 -2 23 54 0 0 chr5 134158165 134158202 -65471948 + AT_rich Low_complexity Low_complexity 1 37 0 1662 174 105 9 chr5 134158446 134158779 -65471371 - MLT1A1 LTR MaLR 0 365 1 405 277 31 15 chr5 134159415 134159545 -65470605 - MIR SINE MIR -116 146 15 2155 124 10 0 chr5 134159702 134160009 -65470141 + AluSx SINE Alu 1 310 -2 220 355 9 37 chr5 134160372 134160479 -65469671 - L3 LINE CR1 -80 1497 1394 30247 106 15 51 chr5 134160485 134162393 -65467757 - L1PA7 LINE L1 -7 6147 4173 2262 96 0 34 chr5 134162393 134162715 -65467435 - AluY SINE Alu 0 311 1 30247 106 15 51 chr5 134162715 134167179 -65462971 - L1PA7 LINE L1 -1981 4173 12 227 226 16 0 chr5 134168096 134168158 -65461992 - L1M4 LINE L1 -3081 3065 3003 * 25604 25 1 0 chr5 134168146 134171908 -65458242 + L1PA3 LINE L1 2390 6154 -1 539 275 169 48 chr5 134171925 134172660 -65457490 - L1M4 LINE L1 -3135 3011 2188 501 282 47 68 chr5 134172676 134172910 -65457240 + L2 LINE L2 3085 3313 0 5299 150 31 48 chr5 134173227 134174070 -65456080 - L1MB7 LINE L1 -9 6175 5343 2337 78 0 0 chr5 134174070 134174379 -65455771 + AluSq SINE Alu 1 309 0 5299 150 31 48 chr5 134174379 134174685 -65455465 - L1MB7 LINE L1 -841 5343 5033 3939 239 84 16 chr5 134174669 134175233 -65454917 - L1M4 LINE L1 -2847 4110 3586 * 1613 191 23 7 chr5 134175233 134175532 -65454618 + AluJo SINE Alu 1 304 -8 3939 239 84 16 chr5 134175532 134176884 -65453266 - L1M4 LINE L1 -3371 3586 2327 2754 17 0 0 chr5 134176884 134177184 -65452966 - AluY SINE Alu -11 300 1 1656 162 70 0 chr5 134177190 134177462 -65452688 - AluJb SINE Alu -21 291 1 3939 239 84 16 chr5 134177462 134178052 -65452098 - L1M4 LINE L1 -4634 2323 1420 626 291 73 21 chr5 134178079 134178416 -65451734 + L2 LINE L2 2757 3129 -184 2384 106 0 0 chr5 134178978 134179290 -65450860 - AluSx SINE Alu 0 312 1 331 317 119 38 chr5 134179339 134179672 -65450478 + L2 LINE L2 2705 3053 -219 6577 222 44 26 chr5 134179744 134179861 -65450289 + L1ME2 LINE L1 2183 2296 -3850 2118 129 3 0 chr5 134179861 134180155 -65449995 + AluSx SINE Alu 1 295 -17 6577 222 44 26 chr5 134180155 134181770 -65448380 + L1ME2 LINE L1 2296 3956 -2190 1931 133 0 14 chr5 134181770 134182090 -65448060 + AluSx SINE Alu 1 316 0 6577 222 44 26 chr5 134182090 134182224 -65447926 + L1ME2 LINE L1 3956 4086 -2060 727 187 22 0 chr5 134182226 134182360 -65447790 + L1ME2 LINE L1 4594 4730 -1416 287 239 57 23 chr5 134182663 134182751 -65447399 - MIR SINE MIR -111 151 61 1438 267 82 22 chr5 134183189 134183563 -65446587 + L1ME2 LINE L1 5173 5523 -641 2078 142 7 0 chr5 134183563 134183866 -65446284 + AluSx SINE Alu 1 305 -7 1438 267 82 22 chr5 134183866 134184232 -65445918 + L1ME2 LINE L1 5523 5955 -209 23 33 0 0 chr5 134184240 134184270 -65445880 + AT_rich Low_complexity Low_complexity 1 30 0 968 188 66 10 chr5 134184446 134184643 -65445507 + MER3 DNA MER1_type 2 209 0 251 200 0 0 chr5 134184681 134184731 -65445419 - MER20 DNA MER1_type -4 215 166 24 53 0 0 chr5 134184824 134184862 -65445288 + AT_rich Low_complexity Low_complexity 1 38 0 200 132 78 0 chr5 134185070 134185199 -65444951 + (TA)n Simple_repeat Simple_repeat 1 139 0 231 50 25 25 chr5 134185199 134185239 -65444911 + (TATAA)n Simple_repeat Simple_repeat 3 42 0 745 90 60 0 chr5 134185240 134185793 -65444357 + (TA)n Simple_repeat Simple_repeat 1 586 0 429 167 56 93 chr5 134185816 134185886 -65444264 - MER20 DNA MER1_type -115 104 38 2253 135 12 26 chr5 134185886 134186227 -65443923 + MER1B DNA MER1_type 2 337 0 429 167 56 93 chr5 134186227 134186264 -65443886 - MER20 DNA MER1_type -181 38 1 229 185 108 15 chr5 134186395 134186460 -65443690 + MIR SINE MIR 117 187 -75 22 0 0 0 chr5 134187031 134187053 -65443097 + AT_rich Low_complexity Low_complexity 1 22 0 2048 138 7 7 chr5 134187327 134187623 -65442527 - AluSx SINE Alu -16 296 1 1150 92 0 0 chr5 134188293 134188435 -65441715 + AluSq/x SINE Alu 1 142 -171 1681 205 54 45 chr5 134188437 134188976 -65441174 - LTR51 LTR ERV1 -160 511 2 277 292 28 83 chr5 134189371 134189515 -65440635 - L2 LINE L2 -976 2338 2203 347 48 0 0 chr5 134190168 134190210 -65439940 + tRNA-Cys-TGC tRNA tRNA 2 43 -32 443 274 51 59 chr5 134190804 134190931 -65439219 - L2 LINE L2 -44 3269 3142 1988 201 102 23 chr5 134190931 134191374 -65438776 - MER66A LTR ERV1 0 478 1 443 274 51 59 chr5 134191374 134191405 -65438745 - L2 LINE L2 -171 3142 3112 2239 122 0 0 chr5 134191405 134191717 -65438433 + AluSx SINE Alu 1 312 0 443 274 51 59 chr5 134191717 134191794 -65438356 - L2 LINE L2 -201 3112 3035 412 145 29 0 chr5 134191796 134191865 -65438285 + AluSg/x SINE Alu 216 286 -24 279 79 0 0 chr5 134191866 134191904 -65438246 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 290 184 0 7 chr5 134191912 134191970 -65438180 + FLAM SINE Alu 54 103 -30 242 290 278 12 chr5 134191972 134192141 -65438009 - L2 LINE L2 -264 3049 2836 570 174 262 13 chr5 134192379 134192528 -65437622 - MER53 DNA DNA 0 189 4 320 219 82 0 chr5 134192543 134192616 -65437534 - MER96B DNA MER1_type? -148 269 191 2441 49 0 0 chr5 134192806 134193092 -65437058 - AluY SINE Alu -20 291 6 2365 124 35 100 chr5 134193139 134193401 -65436749 - MSTA LTR MaLR 0 428 207 1642 146 20 4 chr5 134193401 134193655 -65436495 - AluJb SINE Alu -20 292 35 2365 124 35 100 chr5 134193655 134193850 -65436300 - MSTA LTR MaLR -221 207 1 2677 118 125 9 chr5 134193974 134194397 -65435753 - MER101 LTR ERV1 0 474 3 923 222 80 10 chr5 134195479 134195802 -65434348 + MLT1B LTR MaLR 19 390 0 401 195 0 0 chr5 134196002 134196079 -65434071 + MLT2C2 LTR ERVL 1 77 -387 252 278 161 28 chr5 134196230 134196410 -65433740 + HAL1 LINE L1 2285 2488 -19 331 257 171 62 chr5 134196679 134196889 -65433261 + MIR SINE MIR 15 247 -15 327 287 0 11 chr5 134197044 134197131 -65433019 + L1MC5 LINE L1 6752 6837 -1124 2242 71 14 4 chr5 134197389 134197705 -65432445 + AluY SINE Alu 1 319 0 21 0 0 0 chr5 134197705 134197726 -65432424 + AT_rich Low_complexity Low_complexity 1 21 0 838 272 106 40 chr5 134198209 134198542 -65431608 + L1MCc LINE L1 1183 1493 -5448 2182 135 0 0 chr5 134198542 134198845 -65431305 + AluSx SINE Alu 1 303 -9 838 272 106 40 chr5 134198845 134199364 -65430786 + L1MCc LINE L1 1493 2229 -4712 278 269 124 15 chr5 134199387 134199633 -65430517 + L1ME3A LINE L1 989 1309 -4864 499 195 104 58 chr5 134199652 134199806 -65430344 + LTR50 LTR ERVL 1 161 -634 239 182 73 18 chr5 134199869 134199924 -65430226 + MLT1I LTR MaLR 344 401 -8 893 216 141 14 chr5 134199928 134200219 -65429931 + L1ME3A LINE L1 4919 5246 -883 1235 254 107 31 chr5 134200261 134200328 -65429822 + L1ME3A LINE L1 5351 5411 -742 1538 165 113 58 chr5 134200328 134200621 -65429529 - MLT1A1 LTR MaLR 0 365 49 2842 7 0 0 chr5 134200621 134200923 -65429227 + AluYa5 SINE Alu 1 302 -9 1538 165 113 58 chr5 134200923 134200975 -65429175 - MLT1A1 LTR MaLR -316 49 1 1235 254 107 31 chr5 134200975 134201447 -65428703 + L1ME3A LINE L1 5411 5931 -222 1218 211 149 35 chr5 134203265 134203729 -65426421 - HAL1 LINE L1 -13 2494 1978 318 363 93 0 chr5 134205735 134205917 -65424233 + L2 LINE L2 2866 3064 -208 1520 131 9 41 chr5 134205970 134206290 -65423860 + AluSx SINE Alu 1 310 -2 2408 96 0 0 chr5 134206735 134207047 -65423103 + AluSx SINE Alu 1 312 0 1327 154 86 53 chr5 134207059 134207396 -65422754 + L1MB3 LINE L1 5835 6182 -1 2018 135 10 13 chr5 134209352 134209656 -65420494 + AluJo SINE Alu 1 303 -9 761 188 8 0 chr5 134210002 134210119 -65420031 - FLAM_C SINE Alu -24 119 2 2988 159 42 4 chr5 134212305 134212782 -65417368 + LTR42 LTR ERVL 1 495 0 281 294 54 11 chr5 134212904 134212996 -65417154 + L2 LINE L2 3168 3263 -9 462 294 226 29 chr5 134214469 134214846 -65415304 - L2 LINE L2 -9 3263 2813 454 276 51 25 chr5 134214881 134215077 -65415073 - L2 LINE L2 -569 2745 2545 383 309 111 16 chr5 134216049 134216356 -65413794 + L1M4 LINE L1 3952 4287 -1859 214 266 47 0 chr5 134216455 134216519 -65413631 + MIR SINE MIR 196 262 0 299 281 26 26 chr5 134216674 134216788 -65413362 + L1M4 LINE L1 4487 4600 -1546 233 275 53 76 chr5 134216887 134217018 -65413132 + L2 LINE L2 3083 3210 -62 1400 180 107 0 chr5 134217475 134217747 -65412403 + AluJo SINE Alu 7 307 -5 364 160 32 40 chr5 134217786 134217911 -65412239 + G-rich Low_complexity Low_complexity 3 126 0 1926 111 59 17 chr5 134218943 134219232 -65410918 + AluSx SINE Alu 1 301 -11 433 315 51 30 chr5 134221140 134221337 -65408813 + MIR SINE MIR 2 202 -60 630 324 80 15 chr5 134221865 134222201 -65407949 - L2 LINE L2 -830 2484 2127 420 342 91 31 chr5 134222483 134222966 -65407184 - L2 LINE L2 -1189 2125 1614 1063 164 0 11 chr5 134225130 134225307 -65404843 + FAM SINE Alu 1 175 0 2336 92 3 16 chr5 134225320 134225625 -65404525 + AluSc SINE Alu 4 304 -5 353 279 29 0 chr5 134225766 134225870 -65404280 + L1ME4a LINE L1 5593 5699 -422 377 242 22 0 chr5 134228760 134228851 -65401299 - L2 LINE L2 -3 3269 3177 243 292 15 0 chr5 134230770 134230835 -65399315 + L2 LINE L2 3228 3293 -20 416 284 134 25 chr5 134230873 134231074 -65399076 + L1ME4a LINE L1 5750 5972 -149 2201 116 10 0 chr5 134232701 134232993 -65397157 - AluSx SINE Alu -11 301 7 223 294 42 108 chr5 134233088 134233302 -65396848 - MIR SINE MIR -14 248 49 590 293 45 25 chr5 134233621 134233819 -65396331 + MIR SINE MIR 2 203 -59 189 0 0 0 chr5 134234488 134234509 -65395641 + (A)n Simple_repeat Simple_repeat 1 21 0 1427 73 0 6 chr5 134235910 134236087 -65394063 - AluSg/x SINE Alu -13 299 124 860 321 190 32 chr5 134238498 134239774 -65390376 + L2 LINE L2 1565 3059 -213 2205 98 13 23 chr5 134239800 134239944 -65390206 + AluSq SINE Alu 1 145 -168 1940 78 0 0 chr5 134239944 134240174 -65389976 + AluY SINE Alu 1 230 -81 2205 98 13 23 chr5 134240174 134240334 -65389816 + AluSq SINE Alu 145 302 -11 1115 231 68 19 chr5 134240886 134241210 -65388940 - MLT1C LTR MaLR -2 465 126 367 217 23 85 chr5 134241313 134241442 -65388708 - MLT1C LTR MaLR -384 121 1 2721 152 29 12 chr5 134241587 134242074 -65388076 + LTR42 LTR ERVL 1 495 0 248 348 150 11 chr5 134242221 134242595 -65387555 + L2 LINE L2 2543 2979 -334 267 224 17 0 chr5 134242735 134242793 -65387357 + L2 LINE L2 3175 3233 -39 1377 169 19 67 chr5 134244692 134245005 -65385145 + MLT1B LTR MaLR 93 390 0 181 381 113 0 chr5 134245071 134245362 -65384788 - L2 LINE L2 -441 2873 2550 994 114 34 168 chr5 134245761 134246023 -65384127 - AluJb SINE Alu 0 312 86 500 314 24 30 chr5 134246156 134246301 -65383849 + MER91B DNA MER1_type 19 164 -26 2259 112 0 20 chr5 134246301 134246605 -65383545 + AluSg SINE Alu 1 298 -12 500 314 24 30 chr5 134246605 134246628 -65383522 + MER91B DNA MER1_type 164 186 -4 252 100 0 0 chr5 134247196 134247236 -65382914 + (CA)n Simple_repeat Simple_repeat 1 40 0 657 286 6 12 chr5 134248469 134248640 -65381510 + LTR33 LTR ERVL 8 177 -344 288 322 68 27 chr5 134248827 134248935 -65381215 - L2 LINE L2 0 3313 3196 221 0 35 0 chr5 134248935 134248964 -65381186 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 288 322 68 27 chr5 134248964 134249001 -65381149 - L2 LINE L2 -117 3196 3162 1612 170 37 82 chr5 134249560 134249965 -65380185 + MLT1B LTR MaLR 4 390 0 2738 267 52 1 chr5 134250266 134251389 -65378761 - L1ME3 LINE L1 -7 6155 4981 1008 223 119 43 chr5 134251396 134251741 -65378409 + LTR9 LTR ERV1 242 612 0 1013 234 7 38 chr5 134251741 134251931 -65378219 + L1 LINE L1 3317 3496 -2650 2367 94 3 10 chr5 134251931 134252239 -65377911 + AluSx SINE Alu 1 306 -6 1013 234 7 38 chr5 134252239 134252339 -65377811 + L1 LINE L1 3496 3598 -2548 * 3856 125 21 8 chr5 134252312 134253405 -65376745 - L1PBa LINE L1 -4950 1913 634 1200 147 5 0 chr5 134253405 134253602 -65376548 - L1PBa LINE L1 -6663 200 3 343 365 53 48 chr5 134253611 134253967 -65376183 - L1MEc LINE L1 -5360 901 544 1827 158 3 24 chr5 134254210 134254502 -65375648 + AluJo SINE Alu 5 290 -22 668 299 39 27 chr5 134254535 134254866 -65375284 - L1MEc LINE L1 -5696 374 40 1512 296 75 58 chr5 134255119 134255292 -65374858 + L1MEc LINE L1 80 248 -6148 1986 167 3 0 chr5 134255292 134255597 -65374553 + AluJo SINE Alu 3 308 -4 1512 296 75 58 chr5 134255597 134255792 -65374358 + L1MEc LINE L1 248 438 -5958 230 73 24 0 chr5 134255792 134255833 -65374317 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 1512 296 75 58 chr5 134255833 134256988 -65373162 + L1MEc LINE L1 438 1631 -4765 2192 130 0 0 chr5 134256997 134257298 -65372852 + AluSx SINE Alu 1 301 -11 250 206 32 0 chr5 134257870 134257933 -65372217 - MIR SINE MIR -76 132 68 22 0 0 0 chr5 134262758 134262780 -65367370 + AT_rich Low_complexity Low_complexity 1 22 0 209 106 0 21 chr5 134262816 134262863 -65367287 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 219 340 87 0 chr5 134267397 134267500 -65362650 - L2 LINE L2 -2 3311 3200 218 340 41 0 chr5 134268725 134268822 -65361328 + MIR SINE MIR 45 145 -63 207 278 99 26 chr5 134269539 134269690 -65360460 - L2 LINE L2 -889 2425 2264 230 247 86 32 chr5 134272011 134272104 -65358046 + MIR SINE MIR 96 193 -69 404 210 3 3 chr5 134273404 134273489 -65356661 - MLT1A1 LTR MaLR -280 85 5 193 330 109 65 chr5 134274769 134275154 -65354996 - L2 LINE L2 -342 2972 2571 403 283 163 5 chr5 134275330 134275514 -65354636 + MIR SINE MIR 23 235 -27 225 83 0 0 chr5 134275868 134275904 -65354246 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 2272 89 24 3 chr5 134276859 134277152 -65352998 + AluSx SINE Alu 1 299 -13 515 280 88 16 chr5 134277713 134277895 -65352255 - MIR SINE MIR -12 250 56 207 215 54 15 chr5 134279884 134279977 -65350173 - L2 LINE L2 -4 3268 3134 388 244 22 0 chr5 134279996 134280086 -65350064 + MER5A DNA MER1_type 16 107 -82 1408 154 0 5 chr5 134280504 134280712 -65349438 + AluJb SINE Alu 84 290 -22 562 286 96 27 chr5 134280974 134281194 -65348956 - MIR SINE MIR -4 258 24 305 313 128 5 chr5 134281257 134281468 -65348682 - L2 LINE L2 -1363 1951 1715 209 259 25 25 chr5 134281695 134281776 -65348374 - L2 LINE L2 -1894 1420 1340 213 345 122 30 chr5 134283057 134283254 -65346896 - L2 LINE L2 -85 3187 2973 2320 112 0 3 chr5 134286670 134286984 -65343166 - AluSq SINE Alu 0 313 1 709 152 84 89 chr5 134289197 134289388 -65340762 - LTR47A LTR ERVL -2 450 261 290 247 0 26 chr5 134289764 134289841 -65340309 + MER81 DNA DNA 20 94 -20 2805 128 49 30 chr5 134290335 134290362 -65339788 + L1MB3 LINE L1 5682 5707 -476 1962 179 22 3 chr5 134290362 134290719 -65339431 - MLT1A1 LTR MaLR 0 365 2 2805 128 49 30 chr5 134290719 134290929 -65339221 + L1MB3 LINE L1 5707 5912 -271 1931 150 0 14 chr5 134290929 134291244 -65338906 - AluSx SINE Alu 0 311 1 2805 128 49 30 chr5 134291244 134291497 -65338653 + L1MB3 LINE L1 5912 6183 0 26 0 0 0 chr5 134292175 134292201 -65337949 + AT_rich Low_complexity Low_complexity 1 26 0 370 327 35 74 chr5 134292201 134292403 -65337747 - L1ME3A LINE L1 -15 6138 5945 207 100 0 0 chr5 134292421 134292451 -65337699 + (T)n Simple_repeat Simple_repeat 1 30 0 2158 159 78 30 chr5 134292688 134293121 -65337029 + MLT1D LTR MaLR 22 475 -30 378 230 108 14 chr5 134293147 134293286 -65336864 - L1ME3A LINE L1 -523 5630 5479 2233 111 3 3 chr5 134293309 134293606 -65336544 - AluSx SINE Alu -15 297 1 726 154 8 0 chr5 134293647 134293764 -65336386 + L1PA12 LINE L1 729 846 -6735 257 281 66 0 chr5 134293785 134293906 -65336244 - L1ME3A LINE L1 -682 5422 5294 1014 182 11 11 chr5 134293919 134294100 -65336050 - AluJo SINE Alu -16 296 116 318 248 78 0 chr5 134294104 134294233 -65335917 - L1ME3A LINE L1 -869 5260 5122 21261 174 33 15 chr5 134294251 134301185 -65328965 + L1PA13 LINE L1 1 7597 -4 3306 267 83 86 chr5 134301198 134301768 -65328382 - L1MEd LINE L1 -1043 5086 4516 192 40 0 0 chr5 134301768 134301793 -65328357 + (TG)n Simple_repeat Simple_repeat 2 26 0 3306 267 83 86 chr5 134301793 134302552 -65327598 - L1MEd LINE L1 -1613 4516 3756 499 244 55 0 chr5 134302552 134302679 -65327471 - MER94 DNA DNA 0 134 1 3306 267 83 86 chr5 134302679 134303178 -65326972 - L1MEd LINE L1 -2373 3756 3257 2016 132 10 7 chr5 134303178 134303481 -65326669 - AluSx SINE Alu -8 304 1 3306 267 83 86 chr5 134303481 134303595 -65326555 - L1MEd LINE L1 -2872 3257 3144 692 206 61 17 chr5 134303595 134303775 -65326375 - MER58A DNA MER1_type -10 214 27 3306 267 83 86 chr5 134303775 134304040 -65326110 - L1MEd LINE L1 -2985 3144 2880 1347 127 97 27 chr5 134304040 134304340 -65325810 - MER33 DNA MER1_type 0 324 4 3306 267 83 86 chr5 134304340 134305020 -65325130 - L1MEd LINE L1 -3249 2880 2060 209 56 0 28 chr5 134305020 134305056 -65325094 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3306 267 83 86 chr5 134305056 134305340 -65324810 - L1MEd LINE L1 -4069 2060 1777 531 308 30 13 chr5 134305503 134305929 -65324221 - L1MEd LINE L1 -4779 1531 1059 295 159 43 0 chr5 134305929 134305998 -65324152 + CT-rich Low_complexity Low_complexity 2 73 0 400 241 89 87 chr5 134305999 134306473 -65323677 - L1MEd LINE L1 -5011 1108 634 277 24 48 0 chr5 134307500 134307542 -65322608 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 275 305 109 41 chr5 134308151 134308544 -65321606 + L2 LINE L2 2329 2748 -566 406 296 145 65 chr5 134308574 134308989 -65321161 + L2 LINE L2 2820 3267 -5 289 234 32 0 chr5 134309011 134309105 -65321045 + CT-rich Low_complexity Low_complexity 3 99 0 302 299 96 48 chr5 134309119 134309286 -65320864 - L1M4 LINE L1 -815 5331 5157 635 234 35 12 chr5 134309318 134309489 -65320661 + L1ME3 LINE L1 5977 6151 -11 * 799 208 16 20 chr5 134309456 134309490 -65320660 - L1ME2 LINE L1 -313 5853 5820 1970 169 0 7 chr5 134309490 134309797 -65320353 + AluSx SINE Alu 1 305 -7 799 208 16 20 chr5 134309797 134309981 -65320169 - L1ME2 LINE L1 -346 5820 5641 340 233 37 111 chr5 134310043 134310232 -65319918 - L1M4 LINE L1 -1098 5048 4874 186 339 89 18 chr5 134310654 134310766 -65319384 - L2 LINE L2 -20 3252 3133 729 248 33 85 chr5 134310767 134311074 -65319076 - L2 LINE L2 -1 3312 3022 2205 132 0 3 chr5 134311099 134311409 -65318741 + AluJb SINE Alu 1 309 -3 199 248 150 26 chr5 134311482 134311595 -65318555 - L2 LINE L2 -271 3001 2875 675 296 190 22 chr5 134312618 134313414 -65316736 - L2 LINE L2 -13 3300 2377 1159 276 120 26 chr5 134313717 134314290 -65315860 - L2 LINE L2 -981 2333 1707 202 246 157 78 chr5 134315267 134315458 -65314692 - L2 LINE L2 -2890 424 219 399 198 42 10 chr5 134316235 134316331 -65313819 - L1ME4a LINE L1 0 6121 6023 517 167 196 0 chr5 134316453 134316555 -65313595 + L2 LINE L2 3192 3313 0 593 272 144 39 chr5 134316621 134317080 -65313070 - L1ME4a LINE L1 -297 5824 5318 25 51 0 0 chr5 134317129 134317168 -65312982 + AT_rich Low_complexity Low_complexity 1 39 0 310 311 91 0 chr5 134317361 134317580 -65312570 - L1ME4a LINE L1 -1550 4596 4358 582 186 93 17 chr5 134319147 134319265 -65310885 + MIR SINE MIR 20 146 -62 340 319 65 69 chr5 134320003 134320279 -65309871 - L1ME4a LINE L1 -2317 3829 3555 740 292 92 43 chr5 134321180 134321714 -65308436 - L1ME4a LINE L1 -2 6119 5560 533 317 87 43 chr5 134322084 134322384 -65307766 - L1ME4a LINE L1 -840 5306 4994 556 204 28 0 chr5 134322724 134322832 -65307318 + L2 LINE L2 3203 3313 0 1835 93 0 31 chr5 134322926 134323185 -65306965 + AluSq SINE Alu 1 251 -62 396 192 0 67 chr5 134323291 134323327 -65306823 + MIR SINE MIR 166 203 -59 1699 168 40 65 chr5 134323327 134323727 -65306423 - MLT1B LTR MaLR 0 390 1 396 192 0 67 chr5 134323727 134323794 -65306356 + MIR SINE MIR 203 262 0 337 263 95 58 chr5 134323803 134323940 -65306210 + L1ME4a LINE L1 5979 6120 -1 231 261 0 57 chr5 134324264 134324352 -65305798 - LTR67 LTR ERVL 0 557 475 506 293 52 42 chr5 134324451 134324663 -65305487 - LTR67 LTR ERVL -296 261 48 234 246 43 0 chr5 134324709 134324778 -65305372 + MIR SINE MIR 80 151 -111 216 0 0 0 chr5 134327316 134327340 -65302810 + (CCGGG)n Simple_repeat Simple_repeat 4 27 0 271 268 190 7 chr5 134328421 134328563 -65301587 - MIR SINE MIR -48 214 47 217 372 70 0 chr5 134329962 134330048 -65300102 - MER91A DNA MER1_type 0 196 105 188 179 250 0 chr5 134331094 134331150 -65299000 + L2 LINE L2 3236 3305 -8 238 267 145 23 chr5 134331217 134331348 -65298802 - MIR SINE MIR -14 248 102 215 292 177 9 chr5 134331754 134331867 -65298283 + L2 LINE L2 3140 3271 -1 180 171 29 71 chr5 134331929 134331999 -65298151 - L2 LINE L2 -2 3270 3204 297 246 51 59 chr5 134332035 134332153 -65297997 + L2 LINE L2 3197 3313 0 2185 100 0 35 chr5 134333730 134334049 -65296101 - AluSq SINE Alu -5 308 1 399 245 0 11 chr5 134339648 134339742 -65290408 - MIR SINE MIR -140 122 30 361 332 114 26 chr5 134340007 134340278 -65289872 - L2 LINE L2 -500 2814 2520 187 230 166 101 chr5 134341537 134341676 -65288474 + MIR SINE MIR 41 188 -74 212 332 158 16 chr5 134341883 134342073 -65288077 + L2 LINE L2 2894 3110 -162 219 331 35 28 chr5 134343020 134343162 -65286988 - MIR3 SINE MIR -18 190 48 250 259 0 0 chr5 134345624 134345682 -65284468 - L1MC/D LINE L1 -1900 5908 5851 531 281 39 20 chr5 134345855 134346058 -65284092 + MIR SINE MIR 13 219 -43 370 243 19 0 chr5 134346426 134346533 -65283617 - L2 LINE L2 -411 2903 2795 243 289 205 10 chr5 134346562 134346832 -65283318 + L2 LINE L2 2707 3020 -252 2196 104 10 3 chr5 134349014 134349323 -65280827 + AluSx SINE Alu 1 311 -1 190 271 47 24 chr5 134351661 134351746 -65278404 + MIR3 SINE MIR 93 179 -29 374 85 17 0 chr5 134351894 134351953 -65278197 + (TG)n Simple_repeat Simple_repeat 1 60 0 243 133 0 0 chr5 134351953 134351998 -65278152 + (GA)n Simple_repeat Simple_repeat 2 46 0 421 310 40 0 chr5 134352752 134352926 -65277224 + L2 LINE L2 2915 3095 -177 271 277 42 67 chr5 134353858 134353977 -65276173 + MIR SINE MIR 20 135 -127 385 316 100 87 chr5 134355886 134356336 -65273814 - L2 LINE L2 0 3272 2817 2743 10 0 0 chr5 134356449 134356754 -65273396 + AluYa5 SINE Alu 3 307 -4 1889 104 4 7 chr5 134356761 134357030 -65273120 + AluSc SINE Alu 29 296 -13 376 223 0 43 chr5 134357149 134357243 -65272907 + L1ME3A LINE L1 5674 5763 -407 1074 233 62 17 chr5 134357251 134357539 -65272611 + L1ME3A LINE L1 5865 6165 -5 197 289 10 77 chr5 134357850 134357954 -65272196 - L2 LINE L2 -1887 1427 1331 195 319 72 0 chr5 134358464 134358533 -65271617 + MIR SINE MIR 189 262 0 213 39 0 0 chr5 134360994 134361020 -65269130 + (TC)n Simple_repeat Simple_repeat 1 26 0 417 141 0 28 chr5 134361031 134361102 -65269048 - L1MB5 LINE L1 -8 6166 6098 419 283 92 7 chr5 134361273 134361425 -65268725 - MIR SINE MIR -58 204 40 243 133 0 0 chr5 134362301 134362346 -65267804 + (T)n Simple_repeat Simple_repeat 1 45 0 264 126 23 46 chr5 134363692 134363779 -65266371 + CT-rich Low_complexity Low_complexity 2 86 0 485 303 93 6 chr5 134364797 134364959 -65265191 + MIR SINE MIR 39 214 -48 2266 75 0 0 chr5 134368194 134368476 -65261674 + AluY SINE Alu 16 297 -14 412 215 43 0 chr5 134370297 134370390 -65259760 + MER5A DNA MER1_type 10 106 -83 2323 70 0 7 chr5 134371189 134371507 -65258643 - AluY SINE Alu 0 316 1 22 0 0 0 chr5 134371508 134371530 -65258620 + AT_rich Low_complexity Low_complexity 1 22 0 1656 169 0 47 chr5 134371530 134371826 -65258324 - AluJo SINE Alu -30 282 1 206 299 35 69 chr5 134372861 134373005 -65257145 + MIR3 SINE MIR 9 147 -61 224 281 31 0 chr5 134373059 134373123 -65257027 + MIR SINE MIR 113 178 -84 1978 157 0 7 chr5 134373151 134373451 -65256699 - AluSx SINE Alu -14 298 1 338 242 0 44 chr5 134373493 134373584 -65256566 + MIR SINE MIR 166 252 -10 594 188 97 24 chr5 134374156 134374321 -65255829 + MER69A DNA AcHobo 1 177 0 201 262 33 16 chr5 134374358 134374419 -65255731 + MIR SINE MIR 169 230 -32 39 38 0 0 chr5 134374456 134374509 -65255641 + AT_rich Low_complexity Low_complexity 1 53 0 368 286 112 14 chr5 134374544 134374831 -65255319 - L1M4 LINE L1 -2310 3836 3522 513 301 72 10 chr5 134374875 134375068 -65255082 + MIR SINE MIR 23 227 -35 185 328 43 17 chr5 134375070 134375186 -65254964 - L2 LINE L2 -572 2742 2624 1712 129 0 102 chr5 134376643 134376998 -65253152 - AluJb SINE Alu 0 312 1 1869 127 0 14 chr5 134377203 134377478 -65252672 - AluSx SINE Alu -41 271 1 2191 142 0 0 chr5 134377564 134377867 -65252283 + AluJb SINE Alu 1 303 -9 379 296 59 20 chr5 134378591 134378743 -65251407 - MIR3 SINE MIR -31 177 20 22 80 0 0 chr5 134379972 134380022 -65250128 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 134382133 134382154 -65247996 + AT_rich Low_complexity Low_complexity 1 21 0 363 330 120 58 chr5 134383785 134384327 -65245823 + L2 LINE L2 2689 3272 0 25 0 0 0 chr5 134384827 134384852 -65245298 + AT_rich Low_complexity Low_complexity 1 25 0 1665 136 68 34 chr5 134385263 134385557 -65244593 - AluJb SINE Alu -8 304 1 23 0 0 0 chr5 134386717 134386740 -65243410 + AT_rich Low_complexity Low_complexity 1 23 0 2553 48 7 7 chr5 134387002 134387311 -65242839 + AluY SINE Alu 1 309 -2 21 36 0 0 chr5 134388203 134388231 -65241919 + AT_rich Low_complexity Low_complexity 1 28 0 565 376 59 28 chr5 134389324 134389831 -65240319 + L2 LINE L2 2518 3049 -223 282 288 27 0 chr5 134390705 134390778 -65239372 + MIR3 SINE MIR 109 183 -25 391 291 45 9 chr5 134391169 134391279 -65238871 + L2 LINE L2 3153 3266 -6 2777 118 45 5 chr5 134391686 134392134 -65238016 - LTR45B LTR ERV1 0 489 24 1899 149 13 10 chr5 134392135 134392507 -65237643 + AluJo SINE Alu 1 373 0 442 145 0 0 chr5 134392949 134393025 -65237125 + LTR45B LTR ERV1 104 179 -310 1890 130 38 14 chr5 134394757 134395049 -65235101 - AluSx SINE Alu -13 299 1 415 289 66 26 chr5 134395281 134395554 -65234596 - L1ME4a LINE L1 -263 5858 5575 28 48 0 0 chr5 134395987 134396029 -65234121 + AT_rich Low_complexity Low_complexity 1 42 0 187 331 116 35 chr5 134396259 134396431 -65233719 + L2 LINE L2 1420 1605 -1709 1212 296 172 21 chr5 134396491 134397246 -65232904 - L2 LINE L2 -210 3062 2200 2479 87 0 0 chr5 134397425 134397736 -65232414 + AluSq SINE Alu 1 311 -2 1023 279 181 41 chr5 134399312 134400337 -65229813 + HAL1 LINE L1 17 1184 -1323 480 93 8 171 chr5 134400346 134400411 -65229739 + L1MB7 LINE L1 6077 6112 -72 2039 133 3 7 chr5 134400411 134400711 -65229439 + AluSx SINE Alu 1 299 -13 480 93 8 171 chr5 134400711 134400774 -65229376 + L1MB7 LINE L1 6112 6184 0 257 295 58 19 chr5 134400772 134400928 -65229222 + HAL1 LINE L1 1184 1345 -1162 * 507 268 38 28 chr5 134400988 134401201 -65228949 + HAL1 LINE L1 1352 1566 -941 1404 210 89 11 chr5 134401206 134401578 -65228572 - LTR52 LTR ERVL -13 408 8 910 220 83 108 chr5 134401585 134402006 -65228144 + HAL1 LINE L1 1576 2006 -501 1753 134 91 4 chr5 134402006 134402282 -65227868 + AluSx SINE Alu 1 300 -12 910 220 83 108 chr5 134402282 134402645 -65227505 + HAL1 LINE L1 2006 2504 -3 289 174 43 11 chr5 134403482 134403574 -65226576 - L1ME4a LINE L1 -791 5355 5261 972 142 0 0 chr5 134403588 134403729 -65226421 - FLAM_C SINE Alu -2 141 1 1326 208 67 34 chr5 134403729 134403791 -65226359 - L1ME4a LINE L1 -867 5279 5221 2187 119 3 16 chr5 134403791 134404102 -65226048 - AluSc SINE Alu -2 307 1 1326 208 67 34 chr5 134404102 134404516 -65225634 - L1ME4a LINE L1 -925 5221 4787 2112 89 3 63 chr5 134404617 134404933 -65225217 + AluSg SINE Alu 1 297 -13 489 326 118 0 chr5 134405790 134406060 -65224090 + HAL1 LINE L1 2 303 -2204 272 309 45 9 chr5 134406095 134406205 -65223945 + HAL1 LINE L1 414 527 -1980 246 258 28 10 chr5 134406539 134406642 -65223508 + MLT1I LTR MaLR 288 549 0 1043 217 33 68 chr5 134406642 134407038 -65223112 + HAL1 LINE L1 520 901 -1606 2870 253 75 45 chr5 134407049 134408084 -65222066 + L1M3d LINE L1 413 1486 -4817 935 173 19 12 chr5 134408084 134408246 -65221904 + FRAM SINE Alu 1 163 -3 2870 253 75 45 chr5 134408246 134408329 -65221821 + L1M3d LINE L1 1486 1565 -4738 * 4527 143 66 15 chr5 134408324 134409350 -65220800 + L1PA15 LINE L1 5090 6162 -3 * 11345 201 58 30 chr5 134409347 134410713 -65219437 + L1MB1 LINE L1 1185 2511 -3893 2624 30 3 0 chr5 134410713 134411014 -65219136 - AluY SINE Alu -9 302 1 11345 201 58 30 chr5 134411014 134412916 -65217234 + L1MB1 LINE L1 2511 4358 -2046 2157 122 7 0 chr5 134412916 134413220 -65216930 + AluSx SINE Alu 1 306 -6 11345 201 58 30 chr5 134413220 134415054 -65215096 + L1MB1 LINE L1 4358 6398 -6 34 42 0 0 chr5 134415054 134415102 -65215048 + AT_rich Low_complexity Low_complexity 1 48 0 872 206 122 74 chr5 134415126 134415625 -65214525 + HAL1 LINE L1 903 1425 -1082 1897 134 18 0 chr5 134415695 134415978 -65214172 + AluSx SINE Alu 1 288 -24 407 265 134 17 chr5 134415991 134416269 -65213881 + HAL1 LINE L1 2011 2326 -181 2204 130 24 9 chr5 134416269 134416608 -65213542 + MER2 DNA MER2_type 1 344 0 407 265 134 17 chr5 134416608 134416620 -65213530 + HAL1 LINE L1 2326 2335 -172 2154 122 3 0 chr5 134417211 134417505 -65212645 - AluSx SINE Alu -15 297 3 886 167 0 0 chr5 134417527 134417653 -65212497 - FLAM_C SINE Alu -17 126 1 2003 184 73 69 chr5 134417702 134417881 -65212269 - L1MC4a LINE L1 -203 7605 7428 1842 148 7 30 chr5 134417881 134418185 -65211965 + AluJo SINE Alu 1 297 -15 2003 184 73 69 chr5 134418185 134418688 -65211462 - L1MC4a LINE L1 -380 7428 6920 1507 233 53 33 chr5 134418690 134419270 -65210880 - L1MC4a LINE L1 -1347 6461 5870 186 133 0 0 chr5 134419817 134419847 -65210303 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 968 199 62 0 chr5 134420551 134420727 -65209423 - Charlie3 DNA MER1_type -2523 187 1 488 206 51 66 chr5 134422311 134422530 -65207620 + L1M4 LINE L1 5198 5413 -751 266 298 129 0 chr5 134422548 134422672 -65207478 + L1M4b LINE L1 38 177 -6682 257 217 148 35 chr5 134424621 134424736 -65205414 - MIR SINE MIR -6 256 129 29 0 0 0 chr5 134424994 134425023 -65205127 + AT_rich Low_complexity Low_complexity 1 29 0 188 35 35 0 chr5 134425442 134425471 -65204679 + (TG)n Simple_repeat Simple_repeat 1 30 0 1493 211 3 0 chr5 134425679 134425978 -65204172 - AluJo SINE Alu -10 302 3 378 289 10 0 chr5 134426681 134426778 -65203372 - L2 LINE L2 -12 3301 3204 304 295 101 39 chr5 134427983 134428191 -65201959 - L1MC4a LINE L1 -554 5567 5387 332 90 0 0 chr5 134430128 134430180 -65199970 - AluS SINE Alu -210 93 50 239 348 68 25 chr5 134430850 134430968 -65199182 + MIR SINE MIR 140 262 0 214 346 73 29 chr5 134431838 134431974 -65198176 + MIR3 SINE MIR 16 157 -51 222 303 46 9 chr5 134433465 134433574 -65196576 - L2 LINE L2 -27 3245 3133 2108 119 0 3 chr5 134436036 134436339 -65193811 + AluSq SINE Alu 1 302 -11 1996 116 0 7 chr5 134436342 134436636 -65193514 + AluSc SINE Alu 2 293 -16 373 308 96 20 chr5 134436643 134436789 -65193361 + L1M4 LINE L1 4735 4891 -1255 378 313 75 28 chr5 134437178 134437392 -65192758 + MIR SINE MIR 5 228 -34 1019 278 181 2 chr5 134437406 134437848 -65192302 + L2 LINE L2 971 1491 -1823 1387 199 71 0 chr5 134437848 134438130 -65192020 - AluSx SINE Alu 0 302 1 2050 125 0 0 chr5 134438772 134439067 -65191083 - AluSg1 SINE Alu -14 295 1 443 288 7 27 chr5 134439071 134439217 -65190933 + LTR16C LTR ERVL 349 491 0 440 366 33 43 chr5 134439230 134439651 -65190499 + HERV16 LTR ERVL 454 870 -4126 415 307 64 44 chr5 134439697 134439948 -65190202 + HERV16 LTR ERVL 968 1223 -3773 233 218 0 18 chr5 134440088 134440110 -65190040 + AluJo SINE Alu 117 137 -165 255 59 0 0 chr5 134440110 134440144 -65190006 + AluSx SINE Alu 3 36 -266 1777 151 0 3 chr5 134440244 134440536 -65189614 + AluSx SINE Alu 22 312 0 666 234 29 117 chr5 134440562 134440648 -65189502 + L1MEc LINE L1 1639 1731 -4665 2043 131 3 6 chr5 134440648 134440961 -65189189 - AluSx SINE Alu 0 312 1 666 234 29 117 chr5 134440961 134441259 -65188891 + L1MEc LINE L1 1731 1989 -4407 2078 170 70 3 chr5 134441527 134441897 -65188253 - MSTD LTR MaLR -1 395 1 25 31 0 0 chr5 134441902 134441934 -65188216 + AT_rich Low_complexity Low_complexity 1 32 0 484 288 114 74 chr5 134441996 134443231 -65186919 - L1M4 LINE L1 -1131 5015 3731 854 111 0 0 chr5 134444621 134444738 -65185412 + FLAM_C SINE Alu 1 117 -26 249 33 0 0 chr5 134444755 134444785 -65185365 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 307 155 17 0 chr5 134444806 134444864 -65185286 + L2 LINE L2 3254 3312 -1 232 229 0 0 chr5 134446456 134446504 -65183646 + L2 LINE L2 3225 3272 0 387 289 10 0 chr5 134447675 134447772 -65182378 - L2 LINE L2 -12 3301 3204 190 353 0 67 chr5 134449735 134449854 -65180296 + L2 LINE L2 3006 3116 -156 183 119 34 51 chr5 134450259 134450318 -65179832 + G-rich Low_complexity Low_complexity 2 59 0 237 33 0 0 chr5 134450328 134450358 -65179792 + (CGG)n Simple_repeat Simple_repeat 2 31 0 279 0 0 0 chr5 134451808 134451839 -65178311 + (TG)n Simple_repeat Simple_repeat 2 32 0 210 147 0 0 chr5 134452045 134452079 -65178071 + (CAG)n Simple_repeat Simple_repeat 1 34 0 363 276 102 46 chr5 134452606 134452802 -65177348 - MIR SINE MIR -16 246 40 549 299 123 11 chr5 134452921 134453294 -65176856 + L2 LINE L2 2610 3012 -301 318 277 233 31 chr5 134453309 134453468 -65176682 + MIR SINE MIR 17 207 -55 354 342 11 5 chr5 134453666 134453827 -65176323 + MIR SINE MIR 83 243 -19 306 348 94 13 chr5 134454608 134454841 -65175309 - L2 LINE L2 -212 3060 2809 441 313 51 26 chr5 134455772 134455967 -65174183 - MIR SINE MIR -46 216 17 264 59 0 0 chr5 134456891 134456925 -65173225 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 230 335 107 16 chr5 134460186 134460428 -65169722 - L2 LINE L2 -174 3098 2835 335 299 111 7 chr5 134461637 134461781 -65168369 - MIR SINE MIR -12 250 92 311 266 46 9 chr5 134465061 134465170 -65164980 - L2 LINE L2 -27 3245 3133 411 273 57 89 chr5 134465989 134466196 -65163954 - L1ME LINE L1 -554 5567 5372 210 370 0 48 chr5 134468179 134468344 -65161806 + L2 LINE L2 2956 3112 -160 213 216 0 0 chr5 134468464 134468515 -65161635 + (CA)n Simple_repeat Simple_repeat 1 51 0 3176 125 27 79 chr5 134468596 134469154 -65160996 + MER1A DNA MER1_type 1 529 0 2126 118 0 3 chr5 134469231 134469520 -65160630 + AluSx SINE Alu 7 294 -18 489 271 197 22 chr5 134469520 134469905 -65160245 - L2 LINE L2 -18 3295 2791 735 189 126 0 chr5 134469906 134470065 -65160085 - LTR47A LTR ERVL 0 452 274 1903 141 7 30 chr5 134470294 134470599 -65159551 + AluJo SINE Alu 1 298 -14 666 184 145 13 chr5 134470636 134470788 -65159362 - L2 LINE L2 -520 2794 2623 361 326 69 31 chr5 134470790 134471078 -65159072 + L2 LINE L2 2542 2840 -474 270 160 0 0 chr5 134472017 134472067 -65158083 + (CA)n Simple_repeat Simple_repeat 2 51 0 491 212 106 45 chr5 134472195 134472374 -65157776 - MIR SINE MIR -1 261 72 206 139 0 0 chr5 134473361 134473397 -65156753 + L2 LINE L2 2225 2260 -1054 1066 36 7 7 chr5 134473485 134473625 -65156525 + (TTC)n Simple_repeat Simple_repeat 2 141 0 2893 141 0 0 chr5 134473916 134474327 -65155823 - LTR57 LTR ERVL 0 411 1 34097 122 34 10 chr5 134474327 134475714 -65154436 - LTR57-int LTR ERVL 0 5343 3991 1636 93 136 47 chr5 134475714 134475972 -65154178 + AluSx SINE Alu 3 283 -29 34097 122 34 10 chr5 134475972 134478195 -65151955 - LTR57-int LTR ERVL -1352 3991 1566 2346 78 0 0 chr5 134478195 134478478 -65151672 - AluSc SINE Alu -26 283 1 34097 122 34 10 chr5 134478478 134480083 -65150067 - LTR57-int LTR ERVL -3777 1566 1 2694 133 35 0 chr5 134480083 134480480 -65149670 - LTR57 LTR ERVL 0 411 1 2465 85 0 0 chr5 134480872 134481167 -65148983 - AluSg1 SINE Alu -14 295 1 453 267 7 27 chr5 134481170 134481316 -65148834 + LTR16C LTR ERVL 349 491 0 516 324 56 61 chr5 134481341 134481749 -65148401 + HERV16 LTR ERVL 465 870 -4126 895 329 31 21 chr5 134481795 134482205 -65147945 + HERV16 LTR ERVL 968 1372 -4392 2474 77 0 0 chr5 134482205 134482505 -65147645 + AluY SINE Alu 1 300 -11 895 329 31 21 chr5 134482505 134483549 -65146601 + HERV16 LTR ERVL 1372 2863 -2901 265 214 0 0 chr5 134483665 134483735 -65146415 - L1MC5 LINE L1 -129 7832 7763 908 326 57 58 chr5 134483738 134484246 -65145904 + HERV16 LTR ERVL 2859 3366 -2398 1817 130 60 33 chr5 134484246 134484546 -65145604 + AluJb SINE Alu 1 308 -4 908 326 57 58 chr5 134484546 134485001 -65145149 + HERV16 LTR ERVL 3366 3900 -1864 1271 176 4 16 chr5 134485163 134485407 -65144743 + MER96B DNA MER1_type? 7 247 -170 454 275 25 0 chr5 134485606 134485726 -65144424 + MER94 DNA DNA 6 128 -6 260 279 198 0 chr5 134488727 134488813 -65141337 + MIR SINE MIR 15 117 -145 236 279 213 52 chr5 134488939 134489226 -65140924 - L2 LINE L2 -432 2882 2550 2330 113 0 0 chr5 134489712 134490022 -65140128 + AluSx SINE Alu 1 310 -2 360 329 36 14 chr5 134490105 134490245 -65139905 + MIR3 SINE MIR 5 147 -61 3840 148 45 57 chr5 134490253 134490373 -65139777 + L1MB2 LINE L1 5383 5503 -668 1607 155 4 16 chr5 134490373 134490631 -65139519 + AluJo SINE Alu 35 289 -23 3840 148 45 57 chr5 134490631 134491301 -65138849 + L1MB2 LINE L1 5503 6164 -7 278 203 0 16 chr5 134491304 134491368 -65138782 + MIR SINE MIR 137 199 -63 2164 72 10 34 chr5 134492066 134492271 -65137879 - AluSq SINE Alu 0 325 128 212 0 36 0 chr5 134492271 134492299 -65137851 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2164 72 10 34 chr5 134492299 134492424 -65137726 - AluSq SINE Alu -197 128 2 3569 216 37 7 chr5 134492438 134493325 -65136825 - L1MC4a LINE L1 -2 7806 6893 704 158 50 64 chr5 134495685 134495887 -65134263 + L1M4 LINE L1 5197 5395 -751 4854 217 123 49 chr5 134495890 134497011 -65133139 + L1MB7 LINE L1 11 1047 -5912 2175 135 0 0 chr5 134497011 134497307 -65132843 + AluSx SINE Alu 6 301 -11 4854 217 123 49 chr5 134497307 134497635 -65132515 + L1MB7 LINE L1 1047 1349 -5610 786 204 0 0 chr5 134497635 134497767 -65132383 + FLAM_A SINE Alu 1 132 -1 4854 217 123 49 chr5 134497767 134498483 -65131667 + L1MB7 LINE L1 1349 2330 -4629 647 224 15 50 chr5 134498451 134498652 -65131498 + L1MB7 LINE L1 5209 5402 -1555 * 4077 152 17 28 chr5 134498626 134499056 -65131094 + L1MB7 LINE L1 6176 6609 -386 603 0 0 0 chr5 134499056 134499123 -65131027 + (TA)n Simple_repeat Simple_repeat 2 68 0 2182 107 4 0 chr5 134499123 134499425 -65130725 - AluSx SINE Alu 0 303 1 4077 152 17 28 chr5 134499425 134499812 -65130338 + L1MB7 LINE L1 6607 6986 -9 450 256 134 6 chr5 134500268 134500440 -65129710 - MIR SINE MIR -6 256 63 286 211 70 0 chr5 134500693 134500750 -65129400 - L2 LINE L2 -4 3309 3249 325 255 186 0 chr5 134500942 134501044 -65129106 + L2 LINE L2 3150 3270 -2 306 0 0 0 chr5 134501052 134501086 -65129064 + (T)n Simple_repeat Simple_repeat 1 34 0 401 283 87 7 chr5 134501086 134501224 -65128926 + MIR SINE MIR 66 214 -48 189 107 0 0 chr5 134501607 134501635 -65128515 + (TATG)n Simple_repeat Simple_repeat 3 30 0 885 164 113 6 chr5 134502306 134502465 -65127685 + MER45A DNA AcHobo 1 176 -2 244 219 95 95 chr5 134502827 134502964 -65127186 + MIR SINE MIR 8 144 -118 233 267 71 8 chr5 134504587 134504707 -65125443 - MIR SINE MIR -61 147 20 705 230 106 6 chr5 134505736 134505897 -65124253 + MER5B DNA MER1_type 1 177 -1 1026 202 5 0 chr5 134509531 134509729 -65120421 - MLT1B LTR MaLR 0 390 192 262 218 0 0 chr5 134509831 134509886 -65120264 - MLT1B LTR MaLR -319 55 1 2483 164 119 11 chr5 134509887 134510021 -65120129 - L1MB7 LINE L1 -30 6154 6021 781 280 154 17 chr5 134510021 134510496 -65119654 - L1MD1 LINE L1 -226 6016 5477 289 277 85 32 chr5 134510953 134511047 -65119103 - MIR SINE MIR 0 262 164 1990 110 4 0 chr5 134511748 134512011 -65118139 + AluSq SINE Alu 50 313 0 356 333 24 47 chr5 134512160 134512263 -65117887 + MIR SINE MIR 51 148 -114 2270 111 7 0 chr5 134512263 134512570 -65117580 - AluSq SINE Alu -4 309 1 356 333 24 47 chr5 134512570 134512679 -65117471 + MIR SINE MIR 148 258 -4 2084 152 0 13 chr5 134514305 134514634 -65115516 + AluSx SINE Alu 1 312 0 1801 170 14 7 chr5 134516590 134516879 -65113271 + AluJo SINE Alu 1 291 -21 823 165 176 0 chr5 134517930 134518106 -65112044 - MER3 DNA MER1_type 0 209 3 2061 139 33 14 chr5 134518353 134518439 -65111711 - MER47A DNA MER2_type -1957 366 283 2685 159 36 6 chr5 134518439 134518910 -65111240 + MER66B LTR ERV1 1 485 -1 2061 139 33 14 chr5 134518910 134519182 -65110968 - MER47A DNA MER2_type -2040 283 1 191 293 0 0 chr5 134519584 134519625 -65110525 - L2 LINE L2 -85 3187 3147 31 0 0 0 chr5 134519924 134519955 -65110195 + AT_rich Low_complexity Low_complexity 1 31 0 349 274 0 36 chr5 134520154 134520238 -65109912 - L2 LINE L2 -16 3297 3217 322 234 128 11 chr5 134520229 134520323 -65109827 + MIR SINE MIR 152 256 -6 * 252 0 0 0 chr5 134521257 134521285 -65108865 + (CAA)n Simple_repeat Simple_repeat 2 29 0 276 30 0 0 chr5 134521518 134521551 -65108599 + (CA)n Simple_repeat Simple_repeat 2 34 0 242 151 0 19 chr5 134521570 134521623 -65108527 - LTR66 LTR ERVL -171 439 388 1653 163 11 35 chr5 134521636 134521919 -65108231 - AluJb SINE Alu -36 276 1 452 200 88 40 chr5 134522161 134522286 -65107864 - MIR SINE MIR -122 140 10 215 397 16 0 chr5 134522491 134522612 -65107538 - MER5A DNA MER1_type -4 185 63 2469 92 0 0 chr5 134523123 134523428 -65106722 + AluSq SINE Alu 1 305 -8 426 248 121 0 chr5 134523528 134523685 -65106465 - MIR SINE MIR 0 262 87 1998 118 0 7 chr5 134523754 134524033 -65106117 + AluSx SINE Alu 25 301 -11 2237 117 0 0 chr5 134524713 134525004 -65105146 + AluSx SINE Alu 3 293 -19 333 0 0 0 chr5 134525410 134525447 -65104703 + (CA)n Simple_repeat Simple_repeat 1 37 0 2889 143 121 14 chr5 134525897 134526449 -65103701 - LTR36 LTR ERV1 0 611 1 2320 109 0 10 chr5 134526475 134526788 -65103362 - AluSx SINE Alu -2 310 1 1294 148 10 0 chr5 134527112 134527314 -65102836 + MER3 DNA MER1_type 2 205 -4 2302 119 0 0 chr5 134528924 134529234 -65100916 + AluSq SINE Alu 4 313 0 895 278 25 48 chr5 134529638 134529949 -65100201 - L1P4 LINE L1 -372 5789 5487 1823 124 42 42 chr5 134529949 134530256 -65099894 - AluJb SINE Alu -5 307 1 895 278 25 48 chr5 134530256 134530418 -65099732 - L1P4 LINE L1 -674 5487 5323 2202 112 0 30 chr5 134530419 134530724 -65099426 - AluSx SINE Alu -16 296 1 7802 89 9 21 chr5 134530750 134531834 -65098316 - MER11C LTR ERVK 0 1071 1 306 279 63 0 chr5 134531838 134531949 -65098201 - L1M4 LINE L1 -838 5308 5191 282 56 0 0 chr5 134532147 134532183 -65097967 + (CA)n Simple_repeat Simple_repeat 2 37 0 234 0 0 0 chr5 134532743 134532769 -65097381 + (T)n Simple_repeat Simple_repeat 1 26 0 2332 97 3 3 chr5 134533513 134533812 -65096338 + AluSq SINE Alu 1 299 -14 2279 91 0 3 chr5 134533817 134534102 -65096048 + AluSc SINE Alu 1 284 -25 348 282 90 50 chr5 134534132 134534345 -65095805 + L1P5 LINE L1 4749 4952 -1204 2190 110 3 0 chr5 134534345 134534637 -65095513 + AluSx SINE Alu 1 293 -19 348 282 90 50 chr5 134534637 134535080 -65095070 + L1P5 LINE L1 4952 5432 -724 2327 228 120 44 chr5 134535110 134535842 -65094308 - MER21B LTR ERV1 -75 788 1 273 276 211 43 chr5 134535859 134536044 -65094106 + MIR SINE MIR 12 227 -35 205 156 0 0 chr5 134536886 134536918 -65093232 + (TG)n Simple_repeat Simple_repeat 1 32 0 1983 233 144 70 chr5 134537037 134537835 -65092315 - MER21B LTR ERV1 -1 862 6 28577 94 11 9 chr5 134538236 134538594 -65091556 - L1P LINE L1 -2093 4053 3697 2858 13 0 3 chr5 134538594 134538905 -65091245 - AluYb8 SINE Alu -8 310 1 28577 94 11 9 chr5 134538905 134542582 -65087568 - L1P LINE L1 -2449 3697 11 285 51 0 0 chr5 134542758 134542797 -65087353 + (CA)n Simple_repeat Simple_repeat 2 40 0 448 296 82 24 chr5 134543301 134543507 -65086643 + MIR SINE MIR 11 228 -34 1269 257 176 2 chr5 134543514 134543997 -65086153 + L2 LINE L2 964 1530 -1784 1736 131 45 0 chr5 134543999 134544243 -65085907 - AluSx SINE Alu -57 255 1 308 264 379 18 chr5 134544294 134544571 -65085579 - L2 LINE L2 -580 2734 2358 1681 212 154 150 chr5 134544577 134544979 -65085171 + L2 LINE L2 1594 1993 -1321 1025 184 0 0 chr5 134544979 134545142 -65085008 + AluSg/x SINE Alu 135 297 -13 1681 212 154 150 chr5 134545142 134545780 -65084370 + L2 LINE L2 1993 2801 -513 2271 87 0 39 chr5 134545847 134546157 -65083993 - AluSc SINE Alu -11 298 1 2616 121 140 40 chr5 134546238 134546708 -65083442 + LTR44 LTR ERV1 3 519 0 1096 247 88 57 chr5 134546719 134547188 -65082962 + L2 LINE L2 2793 3269 -44 9306 161 9 7 chr5 134547188 134548688 -65081462 + MSTB-int LTR MaLR 150 1651 0 2325 167 65 5 chr5 134548688 134549090 -65081060 + MSTB LTR MaLR 1 426 0 243 88 0 0 chr5 134549102 134549136 -65081014 + (A)n Simple_repeat Simple_repeat 1 34 0 974 169 17 6 chr5 134549145 134549323 -65080827 + FRAM SINE Alu 1 172 -4 180 111 0 0 chr5 134549346 134549373 -65080777 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 676 171 0 71 chr5 134549398 134549538 -65080612 + FLAM_C SINE Alu 2 131 -2 409 232 77 71 chr5 134549585 134549616 -65080534 + L1ME4a LINE L1 5961 5990 -131 1908 113 57 11 chr5 134549616 134549899 -65080251 + AluSq SINE Alu 1 296 -17 2241 122 3 0 chr5 134549899 134550203 -65079947 + AluSx SINE Alu 1 305 -7 409 232 77 71 chr5 134550203 134550325 -65079825 + L1ME4a LINE L1 5989 6116 -5 2242 113 0 7 chr5 134550419 134550721 -65079429 + AluSx SINE Alu 1 300 -12 284 338 21 79 chr5 134551196 134551486 -65078664 + L2 LINE L2 262 534 -2780 1625 135 35 47 chr5 134552514 134552833 -65077317 - MER44D DNA MER2_type -21 588 4 * 1650 171 9 50 chr5 134552833 134553151 -65076999 - MLT2B2 LTR ERVL -11 504 200 2380 82 0 0 chr5 134553160 134553454 -65076696 - AluY SINE Alu -17 294 1 585 179 9 9 chr5 134553462 134553568 -65076582 - FLAM_A SINE Alu -19 123 18 900 119 6 90 chr5 134553569 134553746 -65076404 - MLT2B2 LTR ERVL -305 210 49 372 275 108 8 chr5 134553770 134553917 -65076233 + MIR SINE MIR 45 204 -58 786 238 28 0 chr5 134554151 134554332 -65075818 + L2 LINE L2 2177 2362 -952 5503 115 34 46 chr5 134554332 134555414 -65074736 + L1MB3 LINE L1 5110 6181 -2 1294 293 48 51 chr5 134555503 134555808 -65074342 + L2 LINE L2 2432 2737 -576 1581 156 93 0 chr5 134555808 134556078 -65074072 + AluJb SINE Alu 1 295 -17 1294 293 48 51 chr5 134556078 134556651 -65073499 + L2 LINE L2 2737 3312 -1 2632 131 21 58 chr5 134557413 134557590 -65072560 - LTR32 LTR ERVL -1 470 288 2258 101 7 7 chr5 134557590 134557897 -65072253 + AluSq SINE Alu 1 307 -6 2632 131 21 58 chr5 134557897 134558184 -65071966 - LTR32 LTR ERVL -183 288 23 2248 121 10 0 chr5 134558331 134558637 -65071513 - AluSx SINE Alu -3 309 1 1466 232 139 44 chr5 134559129 134559624 -65070526 - MLT1F1 LTR MaLR 0 567 1 1849 167 0 7 chr5 134559817 134560111 -65070039 + AluJb SINE Alu 1 292 -20 936 108 39 248 chr5 134560887 134560949 -65069201 + MER33 DNA MER1_type 3 76 -2509 1785 161 3 36 chr5 134560949 134561276 -65068874 + AluJo SINE Alu 1 312 0 936 108 39 248 chr5 134561276 134561550 -65068600 + MER33 DNA MER1_type 76 242 -2343 555 132 271 0 chr5 134561550 134561694 -65068456 - MER53 DNA DNA -3 186 4 936 108 39 248 chr5 134561694 134561763 -65068387 + MER33 DNA MER1_type 242 324 0 216 242 0 16 chr5 134562348 134562410 -65067740 + (CCCCG)n Simple_repeat Simple_repeat 2 62 0 1709 84 52 107 chr5 134563631 134563939 -65066211 - AluSc SINE Alu -18 291 1 38 0 0 20 chr5 134566014 134566036 -65064114 + AT_rich Low_complexity Low_complexity 1 22 -26 2171 115 3 0 chr5 134566036 134566324 -65063826 + AluSx SINE Alu 1 289 -23 38 0 0 20 chr5 134566324 134566350 -65063800 + AT_rich Low_complexity Low_complexity 22 48 0 2201 103 6 16 chr5 134566618 134566929 -65063221 + AluSg SINE Alu 1 308 -2 2176 113 7 0 chr5 134567453 134567746 -65062404 + AluSx SINE Alu 1 295 -17 414 182 100 36 chr5 134568304 134568414 -65061736 - L1MA10 LINE L1 -5 6329 6213 376 262 71 24 chr5 134570337 134570463 -65059687 - MIR SINE MIR -55 153 22 518 184 0 0 chr5 134572063 134572150 -65058000 - AluJ/FLAM SINE Alu -224 88 2 2212 107 3 0 chr5 134572156 134572464 -65057686 - AluSp SINE Alu -4 309 1 707 181 17 0 chr5 134572499 134572615 -65057535 - MIR SINE MIR -110 152 35 1297 303 116 28 chr5 134572731 134573632 -65056518 - L2 LINE L2 -160 3112 2148 686 192 17 0 chr5 134574705 134574825 -65055325 - MER20 DNA MER1_type -1 218 97 195 300 191 18 chr5 134575455 134575565 -65054585 + L2 LINE L2 3180 3308 -5 338 278 54 63 chr5 134575686 134575891 -65054259 - L1ME3A LINE L1 -5 6165 5963 1282 222 94 68 chr5 134575982 134576586 -65053564 - L1MC5 LINE L1 -435 7526 6907 1800 142 19 13 chr5 134578898 134579207 -65050943 - AluSq SINE Alu -2 311 1 966 304 105 18 chr5 134583905 134584297 -65045853 - L2 LINE L2 -1 3312 2887 352 275 45 60 chr5 134588492 134588692 -65041458 - LTR16C LTR ERVL -9 482 286 19995 112 20 93 chr5 134590526 134594343 -65035807 + L1P LINE L1 26 3563 -2583 1275 216 0 0 chr5 134594986 134595264 -65034886 + AluSx SINE Alu 5 282 -30 786 254 63 30 chr5 134595323 134595591 -65034559 + L1M4b LINE L1 1339 1615 -5244 390 248 51 8 chr5 134595624 134595741 -65034409 + FLAM_C SINE Alu 9 130 -3 321 330 15 38 chr5 134595747 134596014 -65034136 + L1M4b LINE L1 1623 1883 -4972 7136 191 17 28 chr5 134596118 134597674 -65032476 - L1P LINE L1 -3986 2160 622 531 264 98 12 chr5 134598819 134598982 -65031168 - MER5B DNA MER1_type -1 177 1 203 250 33 0 chr5 134600069 134600129 -65030021 + MIR SINE MIR 86 147 -61 1315 168 20 8 chr5 134602583 134602827 -65027323 + AluSx SINE Alu 60 306 -6 269 239 56 0 chr5 134602883 134602954 -65027196 - MIR SINE MIR -125 137 63 910 121 13 6 chr5 134603017 134603174 -65026976 + (TTCC)n Simple_repeat Simple_repeat 3 160 0 2025 108 10 0 chr5 134603174 134603462 -65026688 - AluSx SINE Alu -17 295 2 323 318 16 39 chr5 134603481 134603610 -65026540 + L2 LINE L2 3185 3310 -3 467 290 161 0 chr5 134603674 134603829 -65026321 - MER5A DNA MER1_type -6 183 4 577 234 31 0 chr5 134603856 134603984 -65026166 + MER33 DNA MER1_type 17 148 -176 191 61 30 0 chr5 134603992 134604025 -65026125 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 2279 93 3 0 chr5 134604028 134604329 -65025821 + AluSq SINE Alu 1 302 -11 249 231 15 15 chr5 134604581 134604646 -65025504 - HAL1 LINE L1 0 2507 2443 1677 175 7 0 chr5 134604776 134605068 -65025082 + AluJb SINE Alu 1 294 -18 303 269 52 30 chr5 134605522 134605656 -65024494 - L2 LINE L2 -1059 2255 2119 607 224 93 9 chr5 134605656 134605870 -65024280 + L2 LINE L2 1981 2212 -1102 343 285 39 23 chr5 134605885 134606015 -65024135 + MER94 DNA DNA 1 132 -2 977 283 172 40 chr5 134606018 134606482 -65023668 + L2 LINE L2 2216 2754 -560 2676 119 21 26 chr5 134606482 134606909 -65023241 - MSTA LTR MaLR -3 425 1 977 283 172 40 chr5 134606909 134606950 -65023200 + L2 LINE L2 2754 2788 -526 1317 213 37 48 chr5 134607180 134607556 -65022594 - MLT1A2 LTR MaLR 0 374 3 29 0 0 0 chr5 134608264 134608293 -65021857 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr5 134610031 134610058 -65020092 + (T)n Simple_repeat Simple_repeat 1 27 0 731 281 138 8 chr5 134611560 134612093 -65018057 - L1ME LINE L1 -301 5820 5201 2218 105 0 13 chr5 134612109 134612422 -65017728 - AluSx SINE Alu -3 309 1 489 271 188 41 chr5 134612430 134612586 -65017564 - L1ME LINE L1 -953 5193 5061 1652 156 4 4 chr5 134612586 134612856 -65017294 - AluJb SINE Alu -5 307 38 489 271 188 41 chr5 134612856 134613039 -65017111 - L1ME LINE L1 -1085 5061 4804 427 301 96 52 chr5 134613041 134614014 -65016136 - L1ME LINE L1 -1450 4696 3682 328 300 83 8 chr5 134614175 134614295 -65015855 + MIR SINE MIR 69 197 -65 1943 145 3 0 chr5 134714378 134714661 -64915489 + AluJo SINE Alu 3 286 -26 230 73 24 0 chr5 134714878 134714919 -64915231 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 2042 252 52 97 chr5 134715103 134716083 -64914067 + L1MEc LINE L1 662 1684 -4712 2211 126 0 0 chr5 134716083 134716392 -64913758 + AluSx SINE Alu 1 309 -3 2042 252 52 97 chr5 134716392 134716502 -64913648 + L1MEc LINE L1 1684 1797 -4599 2132 118 3 16 chr5 134716502 134716816 -64913334 - AluSx SINE Alu -2 310 1 2042 252 52 97 chr5 134716816 134717114 -64913036 + L1MEc LINE L1 1797 1989 -4407 2157 149 81 14 chr5 134717382 134717752 -64912398 - MSTD LTR MaLR -1 395 1 25 31 0 0 chr5 134717757 134717789 -64912361 + AT_rich Low_complexity Low_complexity 1 32 0 673 272 107 82 chr5 134718025 134719074 -64911076 - L1M4 LINE L1 -1328 4818 3744 894 111 0 0 chr5 134720472 134720589 -64909561 + FLAM_C SINE Alu 1 117 -26 249 33 0 0 chr5 134720606 134720636 -64909514 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 325 155 17 0 chr5 134720657 134720715 -64909435 + L2 LINE L2 3254 3312 -1 232 229 0 0 chr5 134722310 134722358 -64907792 + L2 LINE L2 3225 3272 0 387 289 10 0 chr5 134723529 134723626 -64906524 - L2 LINE L2 -12 3301 3204 190 353 0 67 chr5 134725587 134725706 -64904444 + L2 LINE L2 3006 3116 -156 183 119 34 51 chr5 134726111 134726170 -64903980 + G-rich Low_complexity Low_complexity 2 59 0 237 33 0 0 chr5 134726181 134726211 -64903939 + (CGG)n Simple_repeat Simple_repeat 2 31 0 261 0 0 0 chr5 134727661 134727690 -64902460 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 147 0 0 chr5 134727896 134727930 -64902220 + (CAG)n Simple_repeat Simple_repeat 1 34 0 377 286 104 26 chr5 134728457 134728649 -64901501 - MIR SINE MIR -16 246 40 549 299 123 11 chr5 134728768 134729141 -64901009 + L2 LINE L2 2610 3012 -301 318 277 233 31 chr5 134729156 134729315 -64900835 + MIR SINE MIR 17 207 -55 328 328 11 6 chr5 134729513 134729661 -64900489 + MIR SINE MIR 83 230 -32 199 139 0 0 chr5 134730398 134730434 -64899716 + L2 LINE L2 2225 2260 -1054 1066 36 7 7 chr5 134730522 134730662 -64899488 + (TTC)n Simple_repeat Simple_repeat 2 141 0 2931 141 0 0 chr5 134730953 134731364 -64898786 - LTR57 LTR ERVL 0 411 1 34202 122 34 10 chr5 134731364 134732751 -64897399 - LTR57-int LTR ERVL 0 5343 3990 1555 89 136 47 chr5 134732751 134733009 -64897141 + AluSx SINE Alu 3 283 -29 34202 122 34 10 chr5 134733009 134735234 -64894916 - LTR57-int LTR ERVL -1353 3990 1566 2228 78 0 0 chr5 134735234 134735517 -64894633 - AluSc SINE Alu -26 283 1 34202 122 34 10 chr5 134735517 134737122 -64893028 - LTR57-int LTR ERVL -3777 1566 1 2720 133 35 0 chr5 134737122 134737519 -64892631 - LTR57 LTR ERVL 0 411 1 2330 85 0 0 chr5 134737911 134738206 -64891944 - AluSg1 SINE Alu -14 295 1 481 267 7 27 chr5 134738209 134738355 -64891795 + LTR16C LTR ERVL 349 491 0 21205 64 23 1 chr5 134838421 134840891 -64789259 + L1PA6 LINE L1 2577 5069 -1085 2259 88 7 0 chr5 134840891 134841197 -64788953 + AluY SINE Alu 2 309 -2 21205 64 23 1 chr5 134841197 134842301 -64787849 + L1PA6 LINE L1 5069 6148 -6 2108 114 3 10 chr5 134842311 134842610 -64787540 + AluSx SINE Alu 1 297 -15 1495 229 82 34 chr5 134842610 134843392 -64786758 + L1MEc LINE L1 1709 2523 -3873 464 275 111 26 chr5 134843566 134843755 -64786395 + MIR SINE MIR 2 206 -56 2172 122 0 0 chr5 134844488 134844792 -64785358 + AluSq SINE Alu 1 304 -9 1140 274 11 7 chr5 134845218 134845503 -64784647 - LTR16B LTR ERVL 0 464 179 424 258 69 31 chr5 134845544 134845703 -64784447 + L2 LINE L2 3144 3308 -5 432 283 110 55 chr5 134846562 134846799 -64783351 + MIR SINE MIR 13 262 0 207 292 22 56 chr5 134847924 134848013 -64782137 - MIR SINE MIR -100 162 77 31 58 0 0 chr5 134848549 134848601 -64781549 + GC_rich Low_complexity Low_complexity 1 52 0 2314 84 3 0 chr5 134850020 134850329 -64779821 + AluSp SINE Alu 2 311 -2 606 194 91 18 chr5 134850345 134850510 -64779640 - MLT1J2 LTR MaLR -273 177 1 262 289 118 21 chr5 134850530 134850717 -64779433 - L1M4c LINE L1 -2346 4036 3832 236 279 91 31 chr5 134850848 134851167 -64778983 - L1M4c LINE L1 -2705 3677 3340 231 114 0 0 chr5 134851468 134851503 -64778647 + (CA)n Simple_repeat Simple_repeat 2 36 0 362 286 77 60 chr5 134851507 134851689 -64778461 - L1M4c LINE L1 -3959 2425 2303 1994 95 14 3 chr5 134851881 134852164 -64777986 - AluSc SINE Alu 0 309 24 237 270 27 27 chr5 134852496 134852570 -64777580 + MER84 LTR ERVI 167 240 -267 321 257 35 26 chr5 134852839 134852952 -64777198 + L1ME4a LINE L1 5543 5656 -465 1194 233 86 22 chr5 134852977 134853290 -64776860 - MER113 DNA MER1_type? -33 488 139 1811 153 0 4 chr5 134853290 134853595 -64776555 - AluSx SINE Alu 0 309 6 1194 233 86 22 chr5 134853595 134853697 -64776453 - MER113 DNA MER1_type? -382 139 45 262 254 17 0 chr5 134853730 134853789 -64776361 + L1ME4a LINE L1 5648 5707 -414 302 330 29 0 chr5 134853812 134853915 -64776235 + L1ME4a LINE L1 5712 5817 -1991 280 259 135 42 chr5 134853918 134854008 -64776142 + L1ME4a LINE L1 5836 5916 -205 315 0 0 0 chr5 134854008 134854043 -64776107 + (TG)n Simple_repeat Simple_repeat 1 35 0 280 259 135 42 chr5 134854043 134854145 -64776005 + L1ME4a LINE L1 5916 6046 -75 534 312 48 42 chr5 134855062 134855200 -64774950 + L2 LINE L2 2549 2685 -629 2035 156 134 16 chr5 134855200 134855648 -64774502 - MLT1D LTR MaLR 0 505 5 534 312 48 42 chr5 134855648 134855839 -64774311 + L2 LINE L2 2685 2880 -434 2737 126 26 17 chr5 134855874 134856223 -64773927 + MSTB LTR MaLR 1 356 -70 2225 108 0 0 chr5 134856223 134856528 -64773622 - AluSx SINE Alu -7 305 1 2737 126 26 17 chr5 134856528 134856600 -64773550 + MSTB LTR MaLR 356 426 0 243 269 115 51 chr5 134856765 134856843 -64773307 + L2 LINE L2 3156 3238 -34 638 261 0 26 chr5 134856961 134857114 -64773036 + L2 LINE L2 3162 3310 -3 251 241 0 0 chr5 134857254 134857312 -64772838 + MIR SINE MIR 171 228 -34 2407 67 0 0 chr5 134859606 134859906 -64770244 + AluY SINE Alu 1 300 -11 516 208 32 26 chr5 134859951 134859985 -64770165 - MER2 DNA MER2_type -105 134 102 2048 136 0 0 chr5 134859985 134860294 -64769856 - AluSx SINE Alu -3 309 1 516 208 32 26 chr5 134860294 134860390 -64769760 - MER2 DNA MER2_type -137 102 1 802 259 192 16 chr5 134861057 134861503 -64768647 - L2 LINE L2 -8 3305 2782 556 264 62 6 chr5 134861514 134861692 -64768458 + LTR67 LTR ERVL 370 557 0 650 279 93 4 chr5 134862214 134862451 -64767699 + MIR SINE MIR 4 261 -1 222 237 113 72 chr5 134862490 134862587 -64767563 - MIR SINE MIR -88 120 20 503 265 73 77 chr5 134863241 134863475 -64766675 + MIR SINE MIR 3 235 -27 200 300 86 57 chr5 134863837 134863977 -64766173 - MIR SINE MIR -112 150 7 212 171 24 0 chr5 134864620 134864661 -64765489 - L2 LINE L2 -2 3270 3229 890 268 84 7 chr5 134866080 134866367 -64763783 - L2 LINE L2 0 3313 3005 519 323 65 48 chr5 134866538 134866875 -64763275 - L2 LINE L2 -5 3267 2925 205 176 29 118 chr5 134867697 134867765 -64762385 - MIR SINE MIR 0 262 201 1359 215 114 58 chr5 134867781 134868265 -64761885 + LTR33 LTR ERVL 11 521 0 584 289 18 18 chr5 134868265 134868431 -64761719 - MIR SINE MIR -95 167 2 1302 282 48 32 chr5 134869359 134869862 -64760288 + MLT1J LTR MaLR 1 511 0 1751 172 16 3 chr5 134869901 134870204 -64759946 - AluJo SINE Alu -5 307 1 1716 161 3 3 chr5 134870282 134870581 -64759569 - AluSx SINE Alu -2 310 12 341 243 158 48 chr5 134870593 134870865 -64759285 - L1M4 LINE L1 -868 5278 4977 493 270 55 102 chr5 134871276 134871542 -64758608 - L1ME4a LINE L1 0 6121 5844 2538 82 0 0 chr5 134871542 134871845 -64758305 - AluSx SINE Alu -9 303 1 493 270 55 102 chr5 134871845 134872178 -64757972 - L1ME4a LINE L1 -277 5844 5550 226 307 54 60 chr5 134872181 134872347 -64757803 + L2 LINE L2 2616 2780 -534 1161 292 41 39 chr5 134872366 134872825 -64757325 - LTR16B LTR ERVL -4 460 1 283 326 74 52 chr5 134872835 134873105 -64757045 + L2 LINE L2 2825 3100 -172 23 92 0 0 chr5 134874142 134874207 -64755943 + AT_rich Low_complexity Low_complexity 1 65 0 264 179 36 0 chr5 134874228 134874284 -64755866 + L1MA5A LINE L1 6227 6284 -13 962 127 0 0 chr5 134874313 134874463 -64755687 - L1MA5A LINE L1 -19 6278 6129 2152 131 0 7 chr5 134876049 134876346 -64753804 + AluSq SINE Alu 1 295 -18 2201 216 75 57 chr5 134877931 134878036 -64752114 + L1ME3 LINE L1 5084 5186 -976 2279 105 7 0 chr5 134878036 134878332 -64751818 + AluSg SINE Alu 3 300 -10 2201 216 75 57 chr5 134878332 134879041 -64751109 + L1ME3 LINE L1 5186 5954 -208 1991 167 3 0 chr5 134879041 134879347 -64750803 + AluJo SINE Alu 1 307 -5 2201 216 75 57 chr5 134879347 134879449 -64750701 + L1ME3 LINE L1 5954 6053 -109 267 250 0 60 chr5 134879524 134879608 -64750542 + L2 LINE L2 3192 3270 -2 1993 151 10 0 chr5 134879618 134879917 -64750233 + AluSx SINE Alu 3 304 -8 670 174 213 0 chr5 134880251 134880406 -64749744 - MER5A DNA MER1_type 0 189 2 195 42 0 0 chr5 134880935 134880959 -64749191 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2158 141 3 0 chr5 134881102 134881407 -64748743 + AluSx SINE Alu 2 307 -5 3210 106 52 43 chr5 134882295 134882885 -64747265 - MER4B LTR ERV1 -14 765 1 501 310 39 0 chr5 134882885 134883040 -64747110 + MIR SINE MIR 22 182 -80 331 209 99 22 chr5 134883275 134883366 -64746784 - MIR SINE MIR -57 205 108 234 198 84 3 chr5 134883458 134883532 -64746618 - MIR SINE MIR -97 111 34 419 283 47 38 chr5 134884126 134884465 -64745685 + L1ME4a LINE L1 5685 6026 -95 358 299 86 43 chr5 134884715 134884949 -64745201 + L2 LINE L2 3008 3251 -62 2366 261 74 64 chr5 134885296 134885589 -64744561 + L2 LINE L2 1805 2094 -1219 2526 90 0 0 chr5 134885589 134885900 -64744250 - AluSx SINE Alu -1 311 1 2366 261 74 64 chr5 134885900 134887096 -64743054 + L2 LINE L2 2094 3313 0 2466 82 0 0 chr5 134887847 134888140 -64742010 - AluSc SINE Alu -16 293 1 468 292 49 9 chr5 134888310 134888543 -64741607 + L1MC4a LINE L1 5596 5805 -316 430 319 70 11 chr5 134888605 134888821 -64741329 + MIR SINE MIR 18 246 -16 1068 134 0 0 chr5 134889876 134890055 -64740095 + L1MA6 LINE L1 6122 6300 0 553 241 259 9 chr5 134890058 134890374 -64739776 - HAL1 LINE L1 -13 2494 2100 486 260 118 31 chr5 134890376 134890765 -64739385 - HAL1 LINE L1 -1187 1320 898 210 71 0 0 chr5 134890794 134890822 -64739328 + (TTG)n Simple_repeat Simple_repeat 3 30 0 279 114 0 0 chr5 134890826 134890870 -64739280 + (TTC)n Simple_repeat Simple_repeat 3 46 0 432 323 64 60 chr5 134890870 134891134 -64739016 - HAL1 LINE L1 -1554 953 692 1227 165 14 5 chr5 134891134 134891346 -64738804 - MER20 DNA MER1_type -3 216 3 432 323 64 60 chr5 134891346 134891392 -64738758 - HAL1 LINE L1 -1815 692 648 1441 228 171 16 chr5 134891392 134891902 -64738248 - MLT1G LTR MaLR -1 589 1 432 323 64 60 chr5 134891902 134892060 -64738090 - HAL1 LINE L1 -1859 648 482 414 270 39 126 chr5 134892114 134892399 -64737751 - HAL1 LINE L1 -2154 353 94 2147 132 0 0 chr5 134892414 134892702 -64737448 - AluSx SINE Alu -24 288 1 1948 151 25 0 chr5 134892710 134892994 -64737156 - AluJo SINE Alu -21 291 1 1293 255 93 19 chr5 134893492 134893954 -64736196 + LTR33 LTR ERVL 26 521 0 427 226 38 38 chr5 134895748 134895854 -64734296 - MER5B DNA MER1_type 0 178 73 2620 224 93 35 chr5 134895864 134896660 -64733490 - L1ME3A LINE L1 0 6170 5329 352 182 0 15 chr5 134896660 134896726 -64733424 - MER5B DNA MER1_type -113 65 1 290 219 1 79 chr5 134898131 134898230 -64731920 - L1ME LINE L1 -614 5550 5458 392 254 112 22 chr5 134898501 134898635 -64731515 - L2 LINE L2 0 3313 3168 573 65 33 11 chr5 134899067 134899159 -64730991 + L1MB2 LINE L1 6071 6164 -7 4136 151 17 19 chr5 134899278 134900051 -64730099 + L1MB4 LINE L1 5410 6180 0 314 289 30 7 chr5 134900051 134900186 -64729964 - L1ME4a LINE L1 -20 6101 5964 198 0 0 0 chr5 134900197 134900219 -64729931 + (TG)n Simple_repeat Simple_repeat 2 23 0 244 212 15 30 chr5 134900266 134900332 -64729818 - L3 LINE CR1 -259 1318 1254 450 260 26 26 chr5 134902820 134902974 -64727176 + L2 LINE L2 3158 3311 -2 2365 91 0 0 chr5 134903351 134903660 -64726490 - AluSp SINE Alu 0 309 1 376 270 139 7 chr5 134903832 134903969 -64726181 + MIR SINE MIR 2 156 -106 597 296 59 18 chr5 134905158 134905378 -64724772 - MIR SINE MIR -32 230 2 313 250 22 81 chr5 134905384 134905520 -64724630 + MIR SINE MIR 102 229 -33 812 56 19 0 chr5 134905921 134906029 -64724121 + HY1 scRNA scRNA 1 110 -2 2512 87 0 0 chr5 134906029 134906338 -64723812 - AluY SINE Alu 0 311 3 24 32 0 0 chr5 134906347 134906378 -64723772 + AT_rich Low_complexity Low_complexity 1 31 0 310 311 142 25 chr5 134906378 134906696 -64723454 + L1ME3A LINE L1 5595 5949 -221 1866 172 12 68 chr5 134906844 134907256 -64722894 + MLT1D LTR MaLR 117 505 0 203 209 23 0 chr5 134907517 134907560 -64722590 - MER91 DNA MER1_type -32 108 65 219 318 91 15 chr5 134909124 134909256 -64720894 - L2 LINE L2 -18 3254 3113 561 210 35 7 chr5 134909395 134909538 -64720612 + MIR SINE MIR 20 166 -96 192 198 209 44 chr5 134909986 134910077 -64720073 - MIR3 SINE MIR -25 183 78 352 197 73 62 chr5 134910193 134910222 -64719928 - L1ME4a LINE L1 0 6121 6094 1738 159 27 40 chr5 134910222 134910523 -64719627 + AluJb SINE Alu 1 297 -15 352 197 73 62 chr5 134910523 134910671 -64719479 - L1ME4a LINE L1 -27 6094 5942 225 0 0 0 chr5 134910781 134910806 -64719344 + (A)n Simple_repeat Simple_repeat 1 25 0 577 227 20 47 chr5 134911089 134911239 -64718911 - MIR SINE MIR -60 202 57 2067 159 40 73 chr5 134911770 134911832 -64718318 - MLT1D LTR MaLR 0 505 443 2004 157 0 3 chr5 134911832 134912138 -64718012 - AluJo SINE Alu -7 305 1 2067 159 40 73 chr5 134912138 134912597 -64717553 - MLT1D LTR MaLR -62 443 1 794 124 0 0 chr5 134913284 134913397 -64716753 - MER81 DNA DNA -1 113 1 2243 117 13 0 chr5 134918218 134918516 -64711634 - AluSx SINE Alu -10 302 1 781 200 60 32 chr5 134919337 134919522 -64710628 - MER3 DNA MER1_type 0 209 20 2316 103 0 13 chr5 134919820 134919983 -64710167 - AluSq SINE Alu -17 296 137 2642 44 0 0 chr5 134919983 134920281 -64709869 - AluY SINE Alu -13 298 1 2316 103 0 13 chr5 134920281 134920417 -64709733 - AluSq SINE Alu -176 137 1 2107 83 83 0 chr5 134920427 134920704 -64709446 - AluSq SINE Alu -13 300 1 232 280 191 38 chr5 134975000 134975157 -64654993 - MIR SINE MIR -10 252 72 21 36 0 0 chr5 134975615 134975643 -64654507 + GC_rich Low_complexity Low_complexity 1 28 0 791 137 91 5 chr5 134975918 134976138 -64654012 - L1M4 LINE L1 -4584 1842 1514 2050 116 21 0 chr5 134976205 134976490 -64653660 - AluSx SINE Alu -1 311 21 4495 129 110 3 chr5 134976535 134977429 -64652721 - L1PA16 LINE L1 -6 6160 5176 755 121 160 27 chr5 134977424 134977629 -64652521 - L1M4 LINE L1 -4832 1492 1255 * 710 169 34 14 chr5 134977662 134977810 -64652340 + FAM SINE Alu 1 151 -34 202 205 0 0 chr5 134977819 134977858 -64652292 + (TATG)n Simple_repeat Simple_repeat 1 39 0 180 179 0 0 chr5 134977883 134977922 -64652228 + (TA)n Simple_repeat Simple_repeat 2 40 0 272 315 22 0 chr5 134977932 134978021 -64652129 - MIR SINE MIR -92 170 80 269 298 171 25 chr5 134979918 134980076 -64650074 + MIR SINE MIR 72 252 -10 211 376 12 0 chr5 134980090 134980175 -64649975 - L2 LINE L2 -14 3299 3214 452 241 97 56 chr5 134980312 134980507 -64649643 - Charlie8 DNA MER1_type -2214 203 1 202 195 0 0 chr5 134980776 134980817 -64649333 + L2 LINE L2 3273 3313 0 600 192 0 0 chr5 134980896 134981000 -64649150 + AluJb SINE Alu 2 105 -207 1033 166 16 57 chr5 134981181 134981374 -64648776 + AluJb SINE Alu 106 290 -22 2055 156 7 0 chr5 134981399 134981707 -64648443 + AluJb SINE Alu 1 310 -2 312 224 103 28 chr5 134981745 134981852 -64648298 + L1ME4a LINE L1 5949 6063 -58 348 228 154 29 chr5 134981852 134981988 -64648162 + L1ME4a LINE L1 5789 5941 -180 663 250 158 10 chr5 134982128 134982420 -64647730 + HAL1 LINE L1 47 381 -2126 517 304 199 17 chr5 134982471 134982815 -64647335 + HAL1 LINE L1 475 906 -1601 1748 148 43 7 chr5 134982815 134983093 -64647057 - AluJo SINE Alu -22 290 3 517 304 199 17 chr5 134983093 134983156 -64646994 + HAL1 LINE L1 906 956 -1551 474 246 92 14 chr5 134983241 134983383 -64646767 + HAL1 LINE L1 1114 1266 -1241 461 305 16 92 chr5 134983361 134983610 -64646540 + L1MC4a LINE L1 5811 6040 -1768 * 1178 142 4 53 chr5 134983633 134983859 -64646291 + Tigger2a DNA MER2_type 1 215 -219 2714 39 0 3 chr5 134983860 134984166 -64645984 - AluY SINE Alu -6 305 1 351 219 9 38 chr5 134984166 134984271 -64645879 - LTR40a LTR ERVL -416 103 2 598 163 0 41 chr5 134986029 134986152 -64643998 + FLAM_A SINE Alu 25 142 0 257 275 196 7 chr5 134987425 134987563 -64642587 - MIR SINE MIR 0 262 99 422 261 0 26 chr5 134988626 134988741 -64641409 + MIR SINE MIR 103 214 -48 212 254 17 17 chr5 134990111 134990170 -64639980 - MIR SINE MIR -74 134 76 202 329 0 43 chr5 134990211 134990281 -64639869 - MIR SINE MIR -187 75 9 259 243 37 56 chr5 134990324 134990431 -64639719 - L3 LINE CR1 -90 1487 1383 236 221 58 23 chr5 134993188 134993274 -64636876 + L1ME4a LINE L1 6031 6119 -2 544 295 185 29 chr5 134994072 134994741 -64635409 - L2 LINE L2 0 3313 2532 224 200 42 21 chr5 134994753 134994848 -64635302 + (TA)n Simple_repeat Simple_repeat 2 98 0 280 164 164 95 chr5 134994886 134995002 -64635148 - L1MC5 LINE L1 -50 7911 7788 238 216 0 0 chr5 134995092 134995143 -64635007 - L2 LINE L2 -874 2440 2390 2741 175 33 7 chr5 134995500 134996043 -64634107 + MER41D LTR ERV1 1 557 0 192 77 0 0 chr5 134996263 134996289 -64633861 + (ATGGTG)n Simple_repeat Simple_repeat 5 30 0 212 327 204 24 chr5 134996295 134996506 -64633644 - MIR SINE MIR -12 250 2 266 276 49 0 chr5 134997230 134997353 -64632797 + LTR67 LTR ERVL 412 540 -17 657 257 112 14 chr5 134997570 134997784 -64632366 - MIR SINE MIR -23 239 5 415 261 86 17 chr5 134997824 134997996 -64632154 - MIR SINE MIR -48 214 34 983 266 66 87 chr5 134998924 134999624 -64630526 + MER77 LTR ERV1 24 599 -6 2311 156 48 20 chr5 134999772 135000117 -64630033 + L1MA8 LINE L1 5782 6147 -144 2286 108 3 3 chr5 135000117 135000414 -64629736 + AluSx SINE Alu 1 297 -15 2311 156 48 20 chr5 135000414 135000563 -64629587 + L1MA8 LINE L1 6147 6290 -1 896 129 0 15 chr5 135000604 135000736 -64629414 + AluSq/x SINE Alu 1 130 -183 196 51 26 26 chr5 135002637 135002676 -64627474 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 195 42 0 0 chr5 135002967 135002991 -64627159 + (A)n Simple_repeat Simple_repeat 1 24 0 1733 113 96 58 chr5 135003322 135003615 -64626535 + AluSx SINE Alu 1 304 -8 1872 171 7 0 chr5 135003620 135003912 -64626238 - AluJb SINE Alu -18 294 1 390 258 22 22 chr5 135003912 135004090 -64626060 + L1MEc LINE L1 1849 2026 -4370 320 0 25 0 chr5 135004095 135004135 -64626015 + (CA)n Simple_repeat Simple_repeat 2 42 0 1983 215 102 34 chr5 135004135 135004705 -64625445 + L1MEc LINE L1 2179 2783 -3432 1703 188 7 0 chr5 135004705 135004987 -64625163 - AluJo SINE Alu -22 290 7 1983 215 102 34 chr5 135004987 135005197 -64624953 + L1MEc LINE L1 2783 2977 -3238 844 127 0 0 chr5 135005197 135005315 -64624835 + AluJb SINE Alu 1 118 -194 204 97 0 0 chr5 135005987 135006018 -64624132 + (CA)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr5 135006054 135006075 -64624075 + AT_rich Low_complexity Low_complexity 1 21 0 1993 109 10 64 chr5 135006115 135006426 -64623724 + AluSq SINE Alu 9 302 -11 2254 116 0 0 chr5 135006481 135006773 -64623377 + AluSg SINE Alu 1 292 -18 325 250 62 12 chr5 135006773 135006853 -64623297 + L1MC4 LINE L1 6615 6698 -1344 338 121 0 121 chr5 135007763 135007895 -64622255 + FLAM_C SINE Alu 18 133 0 754 280 108 61 chr5 135008352 135008873 -64621277 + L2 LINE L2 2316 2860 -454 1158 146 0 45 chr5 135008922 135009121 -64621029 - MER1B DNA MER1_type -1 338 149 1910 202 123 57 chr5 135009121 135009351 -64620799 - LTR1B LTR ERV1 0 826 613 2834 7 0 3 chr5 135009351 135009652 -64620498 - AluYa5 SINE Alu -11 300 1 1910 202 123 57 chr5 135009652 135010070 -64620080 - LTR1B LTR ERV1 -213 613 135 247 193 67 0 chr5 135010204 135010323 -64619827 + (TG)n Simple_repeat Simple_repeat 2 128 0 354 257 40 0 chr5 135010566 135010667 -64619483 - AluJb SINE Alu -188 114 10 1806 155 51 7 chr5 135010691 135010987 -64619163 - AluSg SINE Alu -1 309 1 1223 87 15 39 chr5 135010987 135011109 -64619041 - LTR26B LTR ERV1 -330 201 84 2146 98 54 14 chr5 135011109 135011404 -64618746 + AluSg SINE Alu 1 307 -3 1223 87 15 39 chr5 135011404 135011487 -64618663 - LTR26B LTR ERV1 -447 84 1 830 253 66 48 chr5 135011487 135011595 -64618555 - L1M4 LINE L1 -2467 3679 3574 2521 65 7 10 chr5 135011595 135011902 -64618248 - AluY SINE Alu -5 306 1 830 253 66 48 chr5 135011902 135012248 -64617902 - L1M4 LINE L1 -2572 3574 3217 364 273 7 67 chr5 135012251 135012336 -64617814 - L1M4 LINE L1 -2972 3174 3100 2507 80 0 0 chr5 135012336 135012637 -64617513 - AluSg SINE Alu -9 301 1 364 273 7 67 chr5 135012637 135012701 -64617449 - L1M4 LINE L1 -3046 3100 3034 1411 151 17 4 chr5 135012701 135012940 -64617210 - AluSg/x SINE Alu -1 311 70 1939 138 0 13 chr5 135013617 135013921 -64616229 + AluSq SINE Alu 1 300 -13 2460 71 3 10 chr5 135013921 135014232 -64615918 + AluY SINE Alu 1 309 -2 2285 116 3 0 chr5 135014448 135014758 -64615392 + AluSq SINE Alu 1 311 -2 1975 160 3 10 chr5 135015023 135015336 -64614814 - AluSx SINE Alu -1 311 1 1660 220 80 62 chr5 135015347 135015426 -64614724 - MER21B LTR ERV1 -31 832 756 2128 124 3 0 chr5 135015426 135015724 -64614426 + AluSx SINE Alu 1 299 -13 1660 220 80 62 chr5 135015724 135016158 -64613992 - MER21B LTR ERV1 -107 756 310 1037 97 0 0 chr5 135016161 135016295 -64613855 - AluSp/q SINE Alu -9 304 171 860 134 0 0 chr5 135016453 135016572 -64613578 + FLAM_C SINE Alu 3 121 -22 2360 59 0 0 chr5 135017717 135017988 -64612162 + AluY SINE Alu 21 291 -20 1787 184 3 3 chr5 135018006 135018294 -64611856 + AluJb SINE Alu 1 288 -24 2310 99 3 0 chr5 135018302 135018596 -64611554 + AluSq SINE Alu 13 307 -6 649 132 0 9 chr5 135018983 135019089 -64611061 + HY1 scRNA scRNA 1 105 -7 2272 105 0 16 chr5 135019113 135019418 -64610732 + AluSx SINE Alu 3 302 -10 2355 88 3 0 chr5 135019420 135019714 -64610436 + AluSp SINE Alu 1 295 -18 3035 123 49 45 chr5 135019732 135020450 -64609700 + L1MB4 LINE L1 5411 6170 -1 1039 134 20 0 chr5 135020552 135020701 -64609449 + AluSc SINE Alu 135 286 -23 22 0 0 0 chr5 135020740 135020762 -64609388 + AT_rich Low_complexity Low_complexity 1 22 0 1908 166 7 0 chr5 135020765 135021061 -64609089 + AluSx SINE Alu 3 300 -12 2022 86 4 4 chr5 135021871 135022126 -64608024 - AluSc SINE Alu -20 289 35 915 150 43 32 chr5 135022594 135022781 -64607369 + MER41B LTR ERV1 389 577 -58 2324 99 0 10 chr5 135022782 135023096 -64607054 - AluSx SINE Alu -1 311 1 463 186 41 83 chr5 135023098 135023169 -64606981 - Cheshire DNA MER1_type -9 2411 2347 1990 159 0 3 chr5 135023169 135023470 -64606680 - AluSx SINE Alu -12 300 1 463 186 41 83 chr5 135023470 135023543 -64606607 - Cheshire DNA MER1_type -73 2347 2273 747 161 17 0 chr5 135023562 135023680 -64606470 - BC200 scRNA scRNA -79 121 2 2040 144 0 13 chr5 135023746 135024059 -64606091 + AluSx SINE Alu 1 309 -3 4193 193 43 73 chr5 135024059 135024167 -64605983 - Cheshire DNA MER1_type -348 2072 1962 2111 120 10 0 chr5 135024167 135024458 -64605692 + AluSx SINE Alu 1 294 -18 4193 193 43 73 chr5 135024458 135024599 -64605551 - Cheshire DNA MER1_type -458 1962 1818 2439 95 0 0 chr5 135024599 135024905 -64605245 + AluSc SINE Alu 1 306 -3 4193 193 43 73 chr5 135024905 135025035 -64605115 - Cheshire DNA MER1_type -602 1818 1686 2069 129 3 10 chr5 135025035 135025337 -64604813 + AluSx SINE Alu 1 300 -12 4193 193 43 73 chr5 135025337 135025599 -64604551 - Cheshire DNA MER1_type -734 1686 1418 2247 158 25 45 chr5 135025599 135025723 -64604427 + L1MB3 LINE L1 5705 5830 -353 2172 132 7 0 chr5 135025723 135026027 -64604123 + AluSx SINE Alu 1 306 -6 2247 158 25 45 chr5 135026027 135026389 -64603761 + L1MB3 LINE L1 5830 6181 -2 2311 105 0 3 chr5 135026399 135026694 -64603456 + AluSp SINE Alu 1 294 -19 4193 193 43 73 chr5 135026694 135026907 -64603243 - Cheshire DNA MER1_type -1011 1409 1191 2270 112 0 0 chr5 135026907 135027201 -64602949 - AluSg SINE Alu -16 294 1 4193 193 43 73 chr5 135027201 135027491 -64602659 - Cheshire DNA MER1_type -1229 1191 948 2165 127 3 0 chr5 135027566 135027866 -64602284 - AluSx SINE Alu -11 301 1 1381 98 0 25 chr5 135027930 135028134 -64602016 - AluY SINE Alu -7 304 106 808 61 0 0 chr5 135028521 135028620 -64601530 - HY3 scRNA scRNA -2 99 1 2297 105 3 3 chr5 135028866 135029162 -64600988 + AluSx SINE Alu 1 296 -16 2112 142 0 0 chr5 135029203 135029506 -64600644 + AluJb SINE Alu 10 312 0 1105 128 122 10 chr5 135029829 135030025 -64600125 + MLT2B2 LTR ERVL 1 218 -297 2303 113 0 3 chr5 135030025 135030335 -64599815 - AluSx SINE Alu -3 309 1 1630 91 0 0 chr5 135030469 135030666 -64599484 - AluSg SINE Alu -111 199 3 871 152 36 0 chr5 135030670 135030808 -64599342 - AluJb SINE Alu -169 143 1 1576 181 92 108 chr5 135030812 135030973 -64599177 + L1MD3 LINE L1 7447 7609 -386 2003 116 28 7 chr5 135030973 135031257 -64598893 - AluSx SINE Alu -22 290 1 1576 181 92 108 chr5 135031257 135031641 -64598509 + L1MD3 LINE L1 7609 7983 -12 1792 168 32 0 chr5 135031937 135032222 -64597928 - AluJb SINE Alu -18 294 1 217 216 0 0 chr5 135034211 135034262 -64595888 + GA-rich Low_complexity Low_complexity 2 52 0 2210 95 3 33 chr5 135034449 135034754 -64595396 - AluSg SINE Alu -14 296 1 1812 117 0 82 chr5 135035288 135035604 -64594546 - AluSx SINE Alu -21 291 2 1676 111 8 8 chr5 135036206 135036440 -64593710 - AluSg/x SINE Alu -12 298 65 395 290 108 16 chr5 135036634 135036820 -64593330 - Charlie2 DNA MER1_type -2620 242 40 1601 128 0 0 chr5 135036902 135037121 -64593029 - AluSg/x SINE Alu -6 306 88 373 138 0 0 chr5 135037122 135037188 -64592962 - Alu SINE Alu -249 50 1 878 285 4 12 chr5 135037327 135037583 -64592567 + MIR SINE MIR 8 261 -1 2034 127 46 65 chr5 135038015 135038184 -64591966 + THE1B LTR MaLR 1 172 -192 2461 88 0 3 chr5 135038184 135038490 -64591660 + AluY SINE Alu 1 305 -6 2034 127 46 65 chr5 135038490 135038691 -64591459 + THE1B LTR MaLR 172 364 0 227 316 10 61 chr5 135038691 135038789 -64591361 + MIR SINE MIR 5 97 -165 1804 71 0 0 chr5 135038867 135039079 -64591071 + AluY SINE Alu 1 212 -99 2382 83 0 10 chr5 135039278 135039591 -64590559 + AluY SINE Alu 1 310 -1 2411 93 3 6 chr5 135039594 135039907 -64590243 + AluSp SINE Alu 1 312 -1 446 185 118 0 chr5 135039938 135040057 -64590093 + Charlie2 DNA MER1_type 2128 2260 -602 1961 149 4 0 chr5 135040058 135040339 -64589811 + AluSx SINE Alu 1 282 -30 657 187 0 0 chr5 135040412 135040519 -64589631 + FLAM_C SINE Alu 1 107 -36 2184 122 0 0 chr5 135041048 135041344 -64588806 + AluSx SINE Alu 1 296 -16 232 172 0 52 chr5 135041470 135041528 -64588622 + Charlie2 DNA MER1_type 2808 2862 0 746 150 9 0 chr5 135041574 135041687 -64588463 + FLAM_C SINE Alu 14 127 -16 2358 85 7 3 chr5 135041807 135042114 -64588036 + AluY SINE Alu 1 308 -3 1361 151 23 53 chr5 135042311 135042615 -64587535 + AluJb SINE Alu 1 295 -17 2279 99 0 17 chr5 135042651 135042975 -64587175 - AluSx SINE Alu 0 312 1 936 123 32 7 chr5 135043184 135043339 -64586811 - AluSx SINE Alu -153 159 1 1651 207 84 52 chr5 135043339 135043630 -64586520 - L1ME1 LINE L1 -53 6113 5798 2352 111 0 0 chr5 135043630 135043936 -64586214 - AluSg SINE Alu -4 306 1 1651 207 84 52 chr5 135043936 135044146 -64586004 - L1ME1 LINE L1 -368 5798 5596 878 227 48 48 chr5 135044146 135044419 -64585731 - AluJo SINE Alu -1 311 39 258 32 0 0 chr5 135044507 135044538 -64585612 + (TC)n Simple_repeat Simple_repeat 1 31 0 1143 156 0 0 chr5 135044539 135044712 -64585438 - AluJb SINE Alu -10 302 130 2124 115 0 7 chr5 135044727 135045015 -64585135 - AluSc SINE Alu -23 286 1 618 256 36 41 chr5 135045017 135045106 -64585044 - L1ME LINE L1 -345 5821 5733 2442 95 0 0 chr5 135045106 135045410 -64584740 - AluSc SINE Alu -5 304 1 618 256 36 41 chr5 135045410 135045478 -64584672 - L1ME LINE L1 -433 5733 5663 1848 172 17 3 chr5 135045478 135045774 -64584376 - AluJo SINE Alu -12 300 1 618 256 36 41 chr5 135045774 135045834 -64584316 - L1ME LINE L1 -503 5663 5604 1415 200 0 15 chr5 135045837 135046097 -64584053 + AluJb SINE Alu 13 268 -44 2334 88 16 0 chr5 135046145 135046452 -64583698 + AluSp SINE Alu 2 313 0 1294 217 45 26 chr5 135046453 135046764 -64583386 - L1ME LINE L1 -581 5585 5265 2500 77 0 0 chr5 135046764 135047064 -64583086 - AluY SINE Alu -11 300 1 1294 217 45 26 chr5 135047064 135047255 -64582895 - L1ME LINE L1 -901 5265 5079 1940 161 7 0 chr5 135047255 135047553 -64582597 + AluJb SINE Alu 1 300 -12 2325 107 3 0 chr5 135047562 135047870 -64582280 + AluSx SINE Alu 2 310 -2 489 183 0 52 chr5 135047910 135048025 -64582125 - FLAM_A SINE Alu -8 134 26 1951 166 7 0 chr5 135048046 135048342 -64581808 - AluSx SINE Alu -14 298 1 3435 226 57 53 chr5 135048353 135048724 -64581426 - L1ME LINE L1 -1112 5034 4666 1939 112 36 36 chr5 135048724 135049029 -64581121 + AluSx SINE Alu 1 305 -7 3435 226 57 53 chr5 135049029 135049247 -64580903 - L1ME LINE L1 -1480 4666 4450 1991 120 39 0 chr5 135049247 135049530 -64580620 - AluSx SINE Alu -18 294 1 1570 150 116 8 chr5 135049532 135049799 -64580351 - AluSg1 SINE Alu -13 296 1 3435 226 57 53 chr5 135049799 135049904 -64580246 - L1ME LINE L1 -1696 4450 4347 1904 112 16 33 chr5 135049904 135050207 -64579943 + AluSx SINE Alu 15 312 0 3435 226 57 53 chr5 135050207 135050691 -64579459 - L1ME LINE L1 -1799 4347 3843 2477 75 7 0 chr5 135050691 135050996 -64579154 + AluSp SINE Alu 1 307 -6 3435 226 57 53 chr5 135050996 135051157 -64578993 - L1ME LINE L1 -2303 3843 3684 1981 170 45 0 chr5 135051162 135051492 -64578658 - LTR26B LTR ERV1 0 531 187 23 0 0 0 chr5 135051609 135051632 -64578518 + AT_rich Low_complexity Low_complexity 1 23 0 2161 102 7 23 chr5 135051637 135051940 -64578210 + AluSx SINE Alu 1 298 -14 1412 104 14 28 chr5 135052039 135052251 -64577899 - AluSg/x SINE Alu -18 294 86 505 239 8 16 chr5 135052300 135052456 -64577694 - L1MA10 LINE L1 -27 6298 5985 2406 77 0 7 chr5 135052505 135052815 -64577335 - AluSg1 SINE Alu 0 309 2 2125 120 7 0 chr5 135052848 135053140 -64577010 + AluSq SINE Alu 1 294 -19 346 185 0 0 chr5 135053159 135053224 -64576926 + L1M4 LINE L1 2300 2364 -3782 1942 170 0 0 chr5 135053227 135053538 -64576612 + AluJb SINE Alu 1 311 -1 2426 58 0 7 chr5 135054144 135054467 -64575683 - AluY SINE Alu 0 311 1 446 300 157 20 chr5 135054894 135055251 -64574899 - L1ME4a LINE L1 -13 6108 5703 2584 58 0 0 chr5 135055257 135055566 -64574584 + AluY SINE Alu 1 309 -2 3386 192 45 65 chr5 135055790 135056256 -64573894 + L1M4 LINE L1 2419 2893 -3253 2223 112 0 3 chr5 135056256 135056551 -64573599 - AluSc SINE Alu -15 294 1 3386 192 45 65 chr5 135056551 135057053 -64573097 + L1M4 LINE L1 2893 3366 -2780 1605 171 21 14 chr5 135057053 135057333 -64572817 + AluJo SINE Alu 1 282 -30 3386 192 45 65 chr5 135057333 135057416 -64572734 + L1M4 LINE L1 3366 3449 -2697 1445 160 99 15 chr5 135057423 135057685 -64572465 + AluJb SINE Alu 5 288 -24 7644 48 2 36 chr5 135057690 135059286 -64570864 + SVA Other Other 1 1386 0 2227 112 0 3 chr5 135059290 135059593 -64570557 + AluSc SINE Alu 1 302 -7 2239 129 0 0 chr5 135059612 135059923 -64570227 + AluSx SINE Alu 1 311 -1 922 247 10 5 chr5 135060089 135060283 -64569867 + MLT1F LTR MaLR 1 195 -347 1382 203 3 28 chr5 135060283 135060429 -64569721 - AluJo SINE Alu -33 279 142 2285 107 3 0 chr5 135060429 135060727 -64569423 - AluSq SINE Alu -14 299 1 1382 203 3 28 chr5 135060727 135060866 -64569284 - AluJo SINE Alu -170 142 1 3427 157 16 92 chr5 135060866 135060914 -64569236 - L1MB8 LINE L1 -105 6073 6023 1923 119 87 3 chr5 135060914 135061200 -64568950 + AluSp SINE Alu 1 310 -3 3427 157 16 92 chr5 135061200 135061769 -64568381 - L1MB8 LINE L1 -155 6023 5527 2500 152 23 19 chr5 135061769 135062196 -64567954 + MSTB1 LTR MaLR 4 432 0 3427 157 16 92 chr5 135062196 135062373 -64567777 - L1MB8 LINE L1 -651 5527 5338 1995 152 0 13 chr5 135062376 135062692 -64567458 + AluSx SINE Alu 1 312 0 2020 105 11 0 chr5 135062718 135062995 -64567155 - AluSx SINE Alu -1 311 32 2198 120 7 0 chr5 135063008 135063307 -64566843 - AluSg SINE Alu -9 301 1 2128 104 7 13 chr5 135063331 135063653 -64566497 - AluSx SINE Alu 0 312 2 2336 114 9 0 chr5 135064146 135064488 -64565662 - MER41B LTR ERV1 -290 345 1 968 140 0 0 chr5 135064527 135064670 -64565480 - AluSg/x SINE Alu -12 300 158 2702 130 14 28 chr5 135064670 135064909 -64565241 - MSTA LTR MaLR -1 427 195 2046 149 3 0 chr5 135064909 135065205 -64564945 - AluSx SINE Alu -15 297 1 2702 130 14 28 chr5 135065205 135065396 -64564754 - MSTA LTR MaLR -233 195 3 394 209 0 0 chr5 135065461 135065528 -64564622 + MLT1D LTR MaLR 1 67 -438 1611 174 46 0 chr5 135065544 135065826 -64564324 - AluJb SINE Alu -17 295 1 2081 123 6 29 chr5 135065836 135066152 -64563998 - AluSq SINE Alu -4 309 1 291 182 0 132 chr5 135066154 135066275 -64563875 + MLT1D LTR MaLR 58 162 -464 1344 90 0 0 chr5 135066299 135066465 -64563685 - AluY SINE Alu -13 298 133 2331 94 0 0 chr5 135066465 135066762 -64563388 - AluY SINE Alu -14 297 1 34 0 0 0 chr5 135066762 135066796 -64563354 + AT_rich Low_complexity Low_complexity 1 34 0 1224 219 34 4 chr5 135066803 135067096 -64563054 + MLT1D LTR MaLR 219 505 0 804 235 97 7 chr5 135067097 135067125 -64563025 + MER110A LTR ERV1 210 234 -257 2341 89 0 7 chr5 135067125 135067418 -64562732 + AluSq SINE Alu 1 291 -22 804 235 97 7 chr5 135067418 135067615 -64562535 + MER110A LTR ERV1 234 453 -38 1562 98 0 10 chr5 135067615 135067819 -64562331 - AluSg/x SINE Alu -11 301 100 804 235 97 7 chr5 135067819 135067862 -64562288 + MER110A LTR ERV1 453 491 0 267 267 27 0 chr5 135067862 135067937 -64562213 + L2 LINE L2 3237 3313 0 294 196 0 0 chr5 135068053 135068104 -64562046 + L1ME1 LINE L1 5671 5721 -612 2267 184 3 20 chr5 135068159 135068559 -64561591 + L1ME1 LINE L1 5728 6280 -54 2262 105 3 0 chr5 135068559 135068855 -64561295 - AluSx SINE Alu -15 297 1 2267 184 3 20 chr5 135068855 135068908 -64561242 + L1ME1 LINE L1 6280 6332 -2 2046 146 3 3 chr5 135068956 135069251 -64560899 - AluSx SINE Alu -17 295 1 2339 110 0 0 chr5 135069307 135069615 -64560535 - AluSg SINE Alu -2 308 1 21 57 0 0 chr5 135069760 135069795 -64560355 + AT_rich Low_complexity Low_complexity 1 35 0 2172 120 0 0 chr5 135069831 135070123 -64560027 - AluSp SINE Alu -21 292 1 2493 54 0 3 chr5 135070371 135070665 -64559485 + AluY SINE Alu 1 293 -18 1221 164 5 23 chr5 135070906 135071126 -64559024 - AluJo SINE Alu -5 307 92 724 222 112 68 chr5 135071131 135071311 -64558839 + L1MC4a LINE L1 5684 5872 -249 1819 159 27 0 chr5 135071311 135071607 -64558543 - AluJb SINE Alu -8 304 1 724 222 112 68 chr5 135071607 135071755 -64558395 + L1MC4a LINE L1 5872 6012 -109 2127 115 3 3 chr5 135071960 135072264 -64557886 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr5 135073238 135073259 -64556891 + GC_rich Low_complexity Low_complexity 1 21 0 1423 112 0 39 chr5 135074945 135075150 -64555000 + AluSx SINE Alu 1 197 -115 706 130 0 81 chr5 135075150 135075273 -64554877 + AluSc SINE Alu 129 241 -68 1780 110 4 16 chr5 135075273 135075528 -64554622 - AluSg SINE Alu -58 252 1 2463 53 36 7 chr5 135076414 135076716 -64553434 + AluY SINE Alu 1 311 0 2379 72 14 0 chr5 135077050 135077341 -64552809 + AluSc SINE Alu 2 296 -13 1558 128 0 13 chr5 135077979 135078205 -64551945 - AluJb SINE Alu -6 306 84 830 189 75 112 chr5 135078318 135078707 -64551443 - L1MC5 LINE L1 -226 7735 7362 2069 138 10 6 chr5 135078707 135079018 -64551132 - AluSx SINE Alu 0 312 1 830 189 75 112 chr5 135079018 135079066 -64551084 - L1MC5 LINE L1 -599 7362 7314 42 36 0 0 chr5 135079067 135079123 -64551027 + AT_rich Low_complexity Low_complexity 1 56 0 1440 226 7 0 chr5 135079123 135079410 -64550740 - AluJb SINE Alu -23 289 1 939 139 0 0 chr5 135079421 135079558 -64550592 - AluSg/x SINE Alu 0 312 176 2007 118 11 7 chr5 135079881 135080161 -64549989 + AluSx SINE Alu 16 296 -16 266 320 107 20 chr5 135080353 135080503 -64549647 - L3b LINE CR1 -131 1452 1290 453 242 61 8 chr5 135081521 135081653 -64548497 - L1ME3A LINE L1 -5 6165 6027 2638 52 0 0 chr5 135082137 135082445 -64547705 - AluY SINE Alu -3 308 1 1965 135 0 42 chr5 135082491 135082657 -64547493 - AluSx SINE Alu -13 299 151 2088 112 49 0 chr5 135082657 135082942 -64547208 - AluSx SINE Alu -13 299 1 1965 135 0 42 chr5 135082942 135083087 -64547063 - AluSx SINE Alu -161 151 1 799 198 32 6 chr5 135083106 135083263 -64546887 - FAM SINE Alu -13 162 2 180 0 0 0 chr5 135083462 135083482 -64546668 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1194 77 6 0 chr5 135085055 135085211 -64544939 + AluY SINE Alu 147 303 -8 1298 162 81 0 chr5 135085249 135085483 -64544667 + AluSg SINE Alu 47 299 -11 2343 80 3 3 chr5 135085857 135086157 -64543993 - AluSx SINE Alu -12 300 1 783 117 86 0 chr5 135086550 135086678 -64543472 - MER85 DNA T2_type 0 139 1 1931 130 40 0 chr5 135087300 135087600 -64542550 - AluSx SINE Alu 0 312 1 248 294 221 0 chr5 135088624 135088787 -64541363 - L2 LINE L2 -4 3309 3111 258 272 158 27 chr5 135088924 135089049 -64541101 - L1ME3A LINE L1 -234 5887 5780 2185 107 68 94 chr5 135089049 135089506 -64540644 - MER65A LTR ERV1 0 445 1 258 272 158 27 chr5 135089506 135089602 -64540548 - L1ME3A LINE L1 -341 5780 5638 765 307 35 9 chr5 135089909 135090137 -64540013 + MIR SINE MIR 26 259 -3 211 353 157 0 chr5 135090257 135090359 -64539791 + L2 LINE L2 3151 3268 -4 272 235 84 42 chr5 135090656 135090775 -64539375 - L2 LINE L2 -116 3197 3074 1648 162 0 72 chr5 135090826 135091147 -64539003 + AluJo SINE Alu 1 298 -14 1651 144 4 4 chr5 135093150 135093400 -64536750 - AluJo SINE Alu -58 254 5 636 326 66 24 chr5 135094358 135094812 -64535338 - L1MC4a LINE L1 -1922 5886 5414 2238 105 0 7 chr5 135095031 135095337 -64534813 + AluSx SINE Alu 1 304 -8 689 221 96 15 chr5 135095355 135095554 -64534596 - MER58A DNA MER1_type -9 215 1 2232 109 0 10 chr5 135096793 135097104 -64533046 - AluSx SINE Alu -4 308 1 274 188 176 0 chr5 135098368 135098453 -64531697 + L1MB8 LINE L1 6063 6162 -16 2421 93 0 0 chr5 135098595 135098907 -64531243 + AluSx SINE Alu 1 312 0 2359 105 0 0 chr5 135099654 135099949 -64530201 - AluSg SINE Alu -15 295 1 1726 185 34 0 chr5 135102402 135102699 -64527451 - AluJo SINE Alu -5 307 1 3093 181 32 30 chr5 135103005 135103602 -64526548 + L1MB7 LINE L1 5457 6059 -125 1682 78 161 0 chr5 135103602 135103872 -64526278 + AluY SINE Alu 2 310 0 3093 181 32 30 chr5 135103872 135103980 -64526170 + L1MB7 LINE L1 6059 6165 -19 419 248 16 25 chr5 135104709 135104830 -64525320 - L2 LINE L2 -1 3312 3193 679 177 35 50 chr5 135105436 135105577 -64524573 + FLAM_A SINE Alu 4 142 0 25 51 0 0 chr5 135106067 135106106 -64524044 + AT_rich Low_complexity Low_complexity 1 39 0 215 91 0 23 chr5 135106340 135106384 -64523766 + (TTAA)n Simple_repeat Simple_repeat 3 45 0 962 183 11 6 chr5 135106946 135107121 -64523029 + AluJb SINE Alu 137 312 0 56 0 0 0 chr5 135107174 135107230 -64522920 + AT_rich Low_complexity Low_complexity 1 56 0 318 165 0 25 chr5 135107251 135107330 -64522820 - L1M4 LINE L1 -2289 3857 3781 787 191 0 8 chr5 135107445 135107576 -64522574 + FLAM_A SINE Alu 1 130 -3 589 255 87 20 chr5 135107653 135107849 -64522301 + MIR SINE MIR 54 262 0 283 198 37 37 chr5 135107927 135108008 -64522142 + L2 LINE L2 3229 3309 -4 2306 95 0 0 chr5 135108383 135108677 -64521473 + AluSg SINE Alu 1 294 -16 353 274 32 21 chr5 135110273 135110368 -64519782 - L2 LINE L2 -40 3232 3137 180 335 28 93 chr5 135110389 135110571 -64519579 - L2 LINE L2 -246 3026 2857 2297 88 0 7 chr5 135111307 135111603 -64518547 + AluSc SINE Alu 1 294 -15 207 0 0 0 chr5 135111889 135111912 -64518238 + (CCCA)n Simple_repeat Simple_repeat 1 23 0 252 0 0 0 chr5 135112101 135112129 -64518021 + (CA)n Simple_repeat Simple_repeat 2 29 0 2036 104 7 14 chr5 135112839 135113126 -64517024 + AluSg SINE Alu 1 285 -25 2323 94 10 0 chr5 135114505 135114804 -64515346 - AluSq SINE Alu -11 302 1 1408 148 5 9 chr5 135115147 135115364 -64514786 - AluJo SINE Alu -12 300 85 1548 149 89 3 chr5 135115412 135115694 -64514456 + AluSx SINE Alu 1 306 -6 27 0 0 0 chr5 135116614 135116641 -64513509 + AT_rich Low_complexity Low_complexity 1 27 0 1048 91 0 0 chr5 135122326 135122458 -64507692 - AluSg/x SINE Alu -8 304 173 21 0 0 0 chr5 135125853 135125874 -64504276 + AT_rich Low_complexity Low_complexity 1 21 0 206 329 24 0 chr5 135126032 135126114 -64504036 + MIR3 SINE MIR 87 170 -38 339 283 94 29 chr5 135127384 135127522 -64502628 - MIR SINE MIR -69 193 47 2208 105 27 10 chr5 135127567 135127863 -64502287 - AluSx SINE Alu -11 301 1 2337 87 0 42 chr5 135127935 135128246 -64501904 + AluSc SINE Alu 1 298 -11 303 185 92 0 chr5 135128538 135128603 -64501547 - MER58 DNA MER1_type 0 2420 2350 959 133 223 0 chr5 135128730 135128918 -64501232 - MER30 DNA MER1_type 0 230 1 490 225 258 0 chr5 135128918 135129096 -64501054 + MIR SINE MIR 2 225 -37 2141 112 7 3 chr5 135129103 135129398 -64500752 + AluSx SINE Alu 5 300 -12 299 191 32 0 chr5 135129973 135130036 -64500114 - L1MB7 LINE L1 -55 6129 6065 343 327 39 0 chr5 135130119 135130272 -64499878 + MIR SINE MIR 85 243 -19 1736 69 0 0 chr5 135133734 135133936 -64496214 + AluSc SINE Alu 94 295 -14 2007 152 16 3 chr5 135134252 135134555 -64495595 + AluJb SINE Alu 1 307 -5 3280 132 100 107 chr5 135136930 135137918 -64492232 - L1MB8 LINE L1 -2 6176 5193 696 121 81 0 chr5 135137919 135138068 -64492082 - L1MB4 LINE L1 -1 6179 6019 21 0 0 0 chr5 135138074 135138095 -64492055 + AT_rich Low_complexity Low_complexity 1 21 0 1382 137 5 0 chr5 135138144 135138348 -64491802 + AluSg/x SINE Alu 85 289 -23 2126 149 91 142 chr5 135138373 135138918 -64491232 - L1MB4 LINE L1 -196 5984 5413 227 233 0 0 chr5 135138918 135138961 -64491189 - MER41A LTR ERV1 -114 440 398 2126 149 91 142 chr5 135138961 135139065 -64491085 - L1MB4 LINE L1 -767 5413 5326 1988 132 0 0 chr5 135139065 135139338 -64490812 - AluSx SINE Alu -39 273 1 2126 149 91 142 chr5 135139338 135139372 -64490778 - L1MB4 LINE L1 -854 5326 5292 180 0 0 0 chr5 135139388 135139408 -64490742 + (TG)n Simple_repeat Simple_repeat 1 20 0 727 124 8 85 chr5 135139420 135139454 -64490696 - AluJb SINE Alu -192 120 85 2009 142 0 10 chr5 135139454 135139749 -64490401 - AluY SINE Alu -19 292 1 727 124 8 85 chr5 135139749 135139843 -64490307 - AluJb SINE Alu -227 85 2 1284 197 44 55 chr5 135139845 135140206 -64489944 - L1MB4 LINE L1 -945 5201 4845 1718 154 14 35 chr5 135140206 135140492 -64489658 + AluJo SINE Alu 1 280 -32 468 51 0 0 chr5 135140493 135140552 -64489598 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 1817 139 38 14 chr5 135140555 135140842 -64489308 - AluSx SINE Alu -14 298 5 830 172 41 0 chr5 135140850 135141019 -64489131 - L1MB4 LINE L1 -1490 4656 4481 1800 158 7 3 chr5 135141022 135141313 -64488837 - AluJb SINE Alu 0 312 21 361 151 0 0 chr5 135141313 135141366 -64488784 + Alu SINE Alu 4 56 -246 1460 118 0 10 chr5 135141366 135141569 -64488581 + AluSg/x SINE Alu 100 300 -12 1455 209 6 32 chr5 135141635 135141946 -64488204 + AluJb SINE Alu 1 303 -9 2028 128 7 4 chr5 135141958 135142239 -64487911 + AluSp SINE Alu 1 282 -31 32 75 0 0 chr5 135143089 135143156 -64486994 + AT_rich Low_complexity Low_complexity 1 67 0 22 0 0 0 chr5 135143608 135143630 -64486520 + AT_rich Low_complexity Low_complexity 1 22 0 294 208 0 0 chr5 135143846 135143899 -64486251 - L2 LINE L2 0 3313 3261 623 132 116 0 chr5 135144192 135144313 -64485837 - L1MD1 LINE L1 -25 6217 6083 342 266 91 56 chr5 135144480 135144623 -64485527 - L2 LINE L2 -1 3312 3165 234 311 33 60 chr5 135144633 135144816 -64485334 - L2 LINE L2 -361 2953 2776 2017 153 0 0 chr5 135144817 135145117 -64485033 - AluJb SINE Alu -12 300 1 2173 149 3 0 chr5 135145129 135145438 -64484712 - AluSx SINE Alu -2 310 1 1786 113 0 8 chr5 135145521 135145760 -64484390 - AluSg/x SINE Alu 0 310 74 528 233 54 0 chr5 135145769 135145898 -64484252 - AluJb SINE Alu -62 250 115 1644 184 39 0 chr5 135145909 135146192 -64483958 + AluJo SINE Alu 1 294 -18 362 339 12 12 chr5 135146192 135146357 -64483793 - L2 LINE L2 -620 2694 2530 526 296 184 60 chr5 135146552 135147345 -64482805 - HAL1 LINE L1 -1600 907 17 757 211 206 9 chr5 135148113 135148331 -64481819 + MIR SINE MIR 2 262 0 599 197 8 0 chr5 135148341 135148467 -64481683 + MER33 DNA MER1_type 1 114 -97 715 78 0 0 chr5 135148712 135148802 -64481348 - 5S rRNA rRNA -31 90 1 2089 104 13 46 chr5 135149085 135149418 -64480732 - AluSg SINE Alu 0 310 1 1750 162 0 0 chr5 135149477 135149736 -64480414 + AluJb SINE Alu 35 293 -19 479 285 80 7 chr5 135149758 135149895 -64480255 + MIR SINE MIR 23 169 -93 269 148 26 20 chr5 135149929 135150159 -64479991 + AluJo SINE Alu 1 294 -8 24 53 0 0 chr5 135150213 135150251 -64479899 + AT_rich Low_complexity Low_complexity 1 38 0 2053 157 0 3 chr5 135150261 135150566 -64479584 - AluSx SINE Alu -8 304 1 1986 147 0 7 chr5 135150597 135150889 -64479261 - AluSx SINE Alu -22 290 1 2104 121 17 10 chr5 135150890 135151187 -64478963 - AluSx SINE Alu -13 299 1 1969 161 0 19 chr5 135151350 135151661 -64478489 - AluJo SINE Alu -7 305 1 324 64 0 0 chr5 135151701 135151748 -64478402 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 570 246 0 9 chr5 135151756 135151870 -64478280 - FLAM_A SINE Alu -17 116 4 2360 92 0 3 chr5 135152384 135152689 -64477461 - AluSq SINE Alu -9 304 1 1912 153 35 0 chr5 135152998 135153285 -64476865 + AluSx SINE Alu 1 297 -15 303 214 0 0 chr5 135153312 135153382 -64476768 + (TG)n Simple_repeat Simple_repeat 2 71 0 693 92 31 0 chr5 135153394 135153492 -64476658 + AluSp/q SINE Alu 193 293 -20 2065 119 3 7 chr5 135153497 135153790 -64476360 + AluSq SINE Alu 1 292 -21 814 172 0 0 chr5 135153834 135153962 -64476188 - FLAM_C SINE Alu -5 128 1 3064 164 106 22 chr5 135154014 135154732 -64475418 - L1MB7 LINE L1 -127 6057 5280 2333 82 3 0 chr5 135154811 135155134 -64475016 - AluSp SINE Alu 0 324 1 2226 122 7 0 chr5 135155270 135155574 -64474576 + AluSq SINE Alu 1 306 -7 1650 136 37 4 chr5 135155819 135156062 -64474088 + AluSx SINE Alu 48 298 -14 431 52 52 0 chr5 135156072 135156130 -64474020 + U7 snRNA snRNA 2 62 -1 317 313 78 30 chr5 135156624 135156790 -64473360 - L2 LINE L2 -85 3187 3014 430 257 0 9 chr5 135157396 135157509 -64472641 - LTR67 LTR ERVL -14 543 432 433 313 175 23 chr5 135157940 135158157 -64471993 - MIR SINE MIR 0 262 13 2178 68 75 4 chr5 135159757 135160037 -64470113 + AluY SINE Alu 1 300 -11 454 254 75 35 chr5 135160143 135160167 -64469983 + L1MC4a LINE L1 5255 5277 -2531 1709 149 73 17 chr5 135160167 135160455 -64469695 - AluJo SINE Alu -8 304 1 454 254 75 35 chr5 135160455 135160658 -64469492 + L1MC4a LINE L1 5277 5491 -2317 791 157 16 0 chr5 135160900 135161021 -64469129 + FLAM_A SINE Alu 1 123 -10 281 238 139 25 chr5 135161025 135161047 -64469103 + L1MC4a LINE L1 5482 5500 -621 2655 114 48 10 chr5 135161047 135161459 -64468691 - MSTA LTR MaLR 0 428 1 281 238 139 25 chr5 135161459 135161558 -64468592 + L1MC4a LINE L1 5500 5617 -504 634 237 82 109 chr5 135161562 135162120 -64468030 - MLT1H LTR MaLR -5 544 2 446 263 42 53 chr5 135162121 135162406 -64467744 + L1MC4a LINE L1 5609 5890 -1918 2163 125 3 0 chr5 135162408 135162703 -64467447 + AluSx SINE Alu 1 296 -16 800 171 23 0 chr5 135162703 135162832 -64467318 - AluJo/FLAM SINE Alu -180 132 1 645 302 73 0 chr5 135163121 135163326 -64466824 + MIR SINE MIR 23 242 -20 3320 174 33 13 chr5 135163800 135164402 -64465748 - MER90 LTR ERV1 0 614 1 1969 138 7 10 chr5 135164768 135165065 -64465085 - AluSx SINE Alu -16 296 1 2212 102 7 3 chr5 135165178 135165483 -64464667 + AluSx SINE Alu 1 306 -6 291 281 33 105 chr5 135169710 135169729 -64460421 - L2 LINE L2 -7 3306 3287 2325 68 0 4 chr5 135169729 135170044 -64460106 - AluSc SINE Alu 0 314 1 291 281 33 105 chr5 135170044 135170176 -64459974 - L2 LINE L2 -26 3287 3165 476 273 169 6 chr5 135170507 135170679 -64459471 + MIR SINE MIR 34 233 -29 27 0 0 0 chr5 135171437 135171464 -64458686 + GC_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 135171482 135171503 -64458647 + GC_rich Low_complexity Low_complexity 1 21 0 2775 35 0 0 chr5 135174716 135175027 -64455123 + AluY SINE Alu 1 311 0 249 336 42 8 chr5 135175278 135175397 -64454753 - LTR67 LTR ERVL -10 547 425 928 111 0 59 chr5 135176488 135176641 -64453509 + AluJb SINE Alu 167 310 -2 186 71 0 0 chr5 135177426 135177454 -64452696 + (A)n Simple_repeat Simple_repeat 1 28 0 1407 95 29 121 chr5 135178317 135178590 -64451560 + AluSx SINE Alu 20 267 -45 2367 110 0 3 chr5 135178792 135179102 -64451048 + AluSx SINE Alu 1 309 -3 191 387 94 0 chr5 135179271 135179377 -64450773 - MIR SINE MIR -57 151 36 668 206 102 24 chr5 135179388 135179591 -64450559 + MIR SINE MIR 16 240 -22 304 231 68 26 chr5 135180827 135180944 -64449206 - MIR3 SINE MIR -1 207 86 23 33 0 0 chr5 135183595 135183625 -64446525 + GC_rich Low_complexity Low_complexity 1 30 0 34 55 0 0 chr5 135183943 135183998 -64446152 + GC_rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr5 135184119 135184141 -64446009 + GC_rich Low_complexity Low_complexity 1 22 0 307 257 55 104 chr5 135184450 135184633 -64445517 - L1ME4a LINE L1 -4 6117 5944 648 294 100 47 chr5 135184676 135185036 -64445114 - L2 LINE L2 -1 3312 2934 2149 101 7 7 chr5 135185064 135185362 -64444788 + AluSx SINE Alu 1 298 -14 735 280 98 21 chr5 135185393 135185629 -64444521 + MIR SINE MIR 2 255 -7 473 235 118 46 chr5 135185765 135186003 -64444147 - L1ME4a LINE L1 -239 5882 5628 490 179 265 0 chr5 135186032 135186149 -64444001 - AluJo SINE Alu -163 149 2 2302 103 3 0 chr5 135186168 135186460 -64443690 - AluSq SINE Alu -20 293 1 265 333 121 18 chr5 135186554 135186719 -64443431 - L2 LINE L2 -4 3309 3128 2154 90 0 4 chr5 135186853 135187120 -64443030 + AluY SINE Alu 1 266 -45 4400 107 41 56 chr5 135187949 135188650 -64441500 - LTR8 LTR ERV1 0 691 1 247 282 32 57 chr5 135188698 135188822 -64441328 - MIR3 SINE MIR -50 158 38 28 0 0 0 chr5 135189282 135189310 -64440840 + AT_rich Low_complexity Low_complexity 1 28 0 2063 130 27 0 chr5 135189337 135189629 -64440521 - AluSq SINE Alu -13 300 1 2290 87 7 3 chr5 135190323 135190622 -64439528 - AluSc SINE Alu -9 300 1 225 154 0 0 chr5 135190682 135190721 -64439429 + T-rich Low_complexity Low_complexity 1 39 0 270 128 0 0 chr5 135190723 135190762 -64439388 - LTR54 LTR ERV1 -70 440 402 586 219 9 0 chr5 135190844 135190985 -64439165 - FLAM_A SINE Alu 0 142 1 14659 47 8 1 chr5 135191008 135193600 -64436550 - L1PA6 LINE L1 0 6154 3551 4069 73 15 0 chr5 135193600 135194185 -64435965 + L1P LINE L1 2748 3341 -2805 2473 112 28 8 chr5 135194284 135194641 -64435509 - THE1B LTR MaLR 0 364 1 731 200 0 8 chr5 135194799 135194929 -64435221 - FLAM_A SINE Alu -4 129 1 612 221 143 0 chr5 135196092 135196246 -64433904 + MLT1D LTR MaLR 320 495 -10 1424 214 134 45 chr5 135196863 135197050 -64433100 + MLT1D LTR MaLR 1 170 -335 2404 104 0 3 chr5 135197050 135197357 -64432793 + AluSx SINE Alu 1 306 -6 1424 214 134 45 chr5 135197357 135197632 -64432518 + MLT1D LTR MaLR 170 504 -1 2355 99 0 7 chr5 135197928 135198232 -64431918 - AluSq SINE Alu -11 302 1 247 200 77 15 chr5 135198368 135198433 -64431717 - MER117 DNA MER1_type -112 85 17 2446 107 0 0 chr5 135198584 135198892 -64431258 + AluSx SINE Alu 5 312 0 314 289 162 36 chr5 135198936 135199189 -64430961 - L2 LINE L2 -180 3092 2808 294 307 125 45 chr5 135199214 135199615 -64430535 + L2 LINE L2 2331 2763 -551 279 242 76 61 chr5 135199702 135199834 -64430316 - HAL1 LINE L1 -87 2420 2287 1609 181 27 7 chr5 135199869 135200167 -64429983 - AluJo SINE Alu -8 304 1 321 333 61 33 chr5 135200223 135200403 -64429747 - HAL1b LINE L1 -417 931 747 2339 113 3 0 chr5 135200483 135200792 -64429358 + AluSx SINE Alu 1 310 -2 462 265 143 0 chr5 135201003 135201199 -64428951 - HAL1 LINE L1 -634 1873 1650 410 60 0 0 chr5 135201228 135201278 -64428872 + AluJb SINE Alu 28 77 -235 2268 117 3 0 chr5 135201278 135201578 -64428572 - AluSp SINE Alu -12 301 1 1555 166 4 0 chr5 135201578 135201812 -64428338 + AluJb SINE Alu 66 301 -11 2632 211 72 54 chr5 135201812 135202742 -64427408 - L1MC5 LINE L1 -54 7907 6961 319 162 15 15 chr5 135202904 135202972 -64427178 - L1MC5 LINE L1 -1280 6681 6614 2125 138 3 3 chr5 135203118 135203429 -64426721 + AluSx SINE Alu 1 311 -1 792 191 43 78 chr5 135203438 135203720 -64426430 - HAL1 LINE L1 -860 1647 1376 907 201 0 0 chr5 135203750 135203904 -64426246 + AluSg/x SINE Alu 147 300 -12 182 333 39 0 chr5 135204588 135204666 -64425484 + L2 LINE L2 3169 3249 -64 530 329 142 30 chr5 135204695 135205321 -64424829 - L2 LINE L2 -585 2729 2034 1020 214 16 76 chr5 135205452 135205635 -64424515 - L2 LINE L2 -1 3312 3153 2091 121 47 0 chr5 135205635 135205933 -64424217 + AluSx SINE Alu 1 312 0 1020 214 16 76 chr5 135205933 135206053 -64424097 - L2 LINE L2 -160 3153 3027 1959 147 3 35 chr5 135206053 135206367 -64423783 - AluJo SINE Alu -8 304 1 1163 137 0 71 chr5 135206381 135206578 -64423572 + FRAM SINE Alu 1 176 0 215 263 227 32 chr5 135206592 135206839 -64423311 - L2 LINE L2 -1407 1907 1613 2063 136 33 0 chr5 135207193 135207495 -64422655 + AluSx SINE Alu 1 312 0 183 256 47 0 chr5 135207896 135207939 -64422211 + L2 LINE L2 3008 3052 -261 260 286 223 0 chr5 135208434 135208546 -64421604 + L2 LINE L2 3134 3270 -2 537 16 0 0 chr5 135209155 135209217 -64420933 + (TC)n Simple_repeat Simple_repeat 1 62 0 1864 162 3 10 chr5 135209272 135209580 -64420570 + AluJb SINE Alu 1 306 -6 394 283 0 43 chr5 135210180 135210318 -64419832 + L2 LINE L2 3182 3313 0 24 0 0 0 chr5 135210447 135210471 -64419679 + AT_rich Low_complexity Low_complexity 1 24 0 905 253 69 9 chr5 135210480 135210713 -64419437 - MIR SINE MIR -10 252 6 2340 164 102 30 chr5 135210714 135211185 -64418965 - MLT1D LTR MaLR 0 505 1 2088 129 7 26 chr5 135212307 135212617 -64417533 - AluSx SINE Alu -8 304 1 1718 197 3 3 chr5 135212621 135212925 -64417225 - AluJo SINE Alu -8 304 1 419 139 12 212 chr5 135213278 135213361 -64416789 + MER69 DNA AcHobo 2395 2431 -95 1867 153 0 3 chr5 135213361 135213648 -64416502 - AluJo SINE Alu -21 291 6 419 139 12 212 chr5 135213648 135213729 -64416421 + MER69 DNA AcHobo 2430 2526 0 2353 103 0 10 chr5 135214345 135214656 -64415494 + AluSx SINE Alu 1 308 -4 3505 210 114 35 chr5 135215753 135216923 -64413227 + HAL1b LINE L1 83 1345 -3 319 211 175 18 chr5 135216954 135217068 -64413082 + L1ME4a LINE L1 5989 6120 -1 638 224 360 21 chr5 135217112 135217492 -64412658 + MLT1J LTR MaLR 3 511 0 412 291 45 73 chr5 135217595 135217815 -64412335 + L1M4 LINE L1 5007 5220 -926 257 214 128 43 chr5 135217918 135218035 -64412115 - MER103 DNA DNA -38 128 2 400 251 217 29 chr5 135218590 135218797 -64411353 - MIR SINE MIR -14 248 3 29 70 0 0 chr5 135220028 135220085 -64410065 + GC_rich Low_complexity Low_complexity 1 57 0 21 71 0 0 chr5 135220275 135220317 -64409833 + GC_rich Low_complexity Low_complexity 1 42 0 261 83 0 0 chr5 135221187 135221223 -64408927 + (GGA)n Simple_repeat Simple_repeat 3 38 0 754 278 58 0 chr5 135221781 135221986 -64408164 + MIR SINE MIR 33 249 -13 233 303 121 23 chr5 135222412 135222544 -64407606 + MIR SINE MIR 46 190 -72 189 340 60 10 chr5 135224619 135224719 -64405431 + L2 LINE L2 1404 1508 -1806 437 281 44 7 chr5 135226764 135226899 -64403251 + Charlie8 DNA MER1_type 4 143 -2274 2111 109 18 3 chr5 135226899 135227183 -64402967 + AluSx SINE Alu 1 288 -24 1074 143 0 4 chr5 135227183 135227405 -64402745 + (TA)n Simple_repeat Simple_repeat 1 222 0 393 259 75 41 chr5 135227410 135227557 -64402593 + Charlie8 DNA MER1_type 124 275 -2142 616 329 89 0 chr5 135227616 135227841 -64402309 + MIR SINE MIR 14 258 -4 316 179 0 0 chr5 135227872 135227928 -64402222 + Charlie8 DNA MER1_type 2352 2407 -10 266 308 75 19 chr5 135227934 135228041 -64402109 + L2 LINE L2 3160 3272 0 411 318 170 5 chr5 135228075 135228298 -64401852 + MIR SINE MIR 2 261 -1 393 22 0 0 chr5 135229389 135229435 -64400715 + (TG)n Simple_repeat Simple_repeat 1 46 0 257 194 0 16 chr5 135236828 135236890 -64393260 + CT-rich Low_complexity Low_complexity 5 65 0 217 268 113 0 chr5 135239747 135239818 -64390332 - L2 LINE L2 -44 3228 3150 652 204 164 0 chr5 135240132 135240284 -64389866 - MER69A DNA AcHobo 0 177 1 556 234 39 0 chr5 135240982 135241110 -64389040 + MER94 DNA DNA 2 134 0 747 221 92 8 chr5 135241735 135241940 -64388210 - MIR SINE MIR -33 229 15 219 182 45 0 chr5 135243075 135243119 -64387031 + MIR3 SINE MIR 117 162 -46 216 0 0 0 chr5 135243398 135243422 -64386728 + (A)n Simple_repeat Simple_repeat 1 24 0 2147 127 0 13 chr5 135248098 135248405 -64381745 - AluSx SINE Alu -9 303 1 296 326 21 0 chr5 135250380 135250475 -64379675 + MIR SINE MIR 80 176 -86 180 179 0 0 chr5 135250480 135250519 -64379631 + (TA)n Simple_repeat Simple_repeat 1 39 0 921 179 7 7 chr5 135250593 135250744 -64379406 - FAM SINE Alu -34 151 1 21 82 0 0 chr5 135250751 135250800 -64379350 + AT_rich Low_complexity Low_complexity 1 49 0 4762 130 100 8 chr5 135250800 135251898 -64378252 + L1PA16 LINE L1 1255 6440 -6 2219 117 3 0 chr5 135251945 135252235 -64377915 + AluSx SINE Alu 21 311 -1 2531 130 277 3 chr5 135252308 135252937 -64377213 + L1MCa LINE L1 1514 2314 -4112 698 281 81 81 chr5 135252958 135253270 -64376880 + L1MDa LINE L1 2044 2354 -4229 2418 95 3 0 chr5 135253270 135253575 -64376575 - AluSg SINE Alu -4 306 1 2172 132 0 0 chr5 135253575 135253878 -64376272 - AluSx SINE Alu -6 306 4 698 281 81 81 chr5 135253878 135254022 -64376128 + L1MDa LINE L1 2353 2541 -4042 1720 171 7 23 chr5 135254022 135254327 -64375823 + AluJo SINE Alu 1 300 -12 576 146 0 0 chr5 135254327 135254430 -64375720 + (GGGA)n Simple_repeat Simple_repeat 2 104 0 304 211 3 3 chr5 135254430 135254551 -64375599 + L1MDa LINE L1 2441 2599 -3979 740 181 32 85 chr5 135254575 135254614 -64375536 + MLT1A2 LTR MaLR 1 41 -333 2206 131 0 0 chr5 135254614 135254919 -64375231 - AluSx SINE Alu -3 309 5 740 181 32 85 chr5 135254919 135255067 -64375083 + MLT1A2 LTR MaLR 41 178 -196 294 87 0 0 chr5 135255125 135255171 -64374979 + (GA)n Simple_repeat Simple_repeat 2 47 0 1639 221 128 9 chr5 135255177 135255716 -64374434 + L1MB8 LINE L1 3813 4415 -1731 1174 111 0 25 chr5 135255718 135255912 -64374238 + AluSg/x SINE Alu 126 315 0 3699 168 71 74 chr5 135255913 135256394 -64373756 + L1MB8 LINE L1 4411 4892 -1286 286 119 0 0 chr5 135256394 135256436 -64373714 - 5S rRNA rRNA -79 42 1 3699 168 71 74 chr5 135256436 135256540 -64373610 + L1MB8 LINE L1 4892 4995 -1183 2365 107 3 0 chr5 135256540 135256848 -64373302 + AluSx SINE Alu 3 311 -1 3699 168 71 74 chr5 135256848 135256881 -64373269 + L1MB8 LINE L1 4995 5027 -1151 2416 51 3 51 chr5 135256881 135257195 -64372955 + AluY SINE Alu 1 299 -12 3699 168 71 74 chr5 135257195 135258316 -64371834 + L1MB8 LINE L1 5027 6169 -9 386 302 57 16 chr5 135258329 135258521 -64371629 - L2 LINE L2 -157 3156 2957 * 861 238 19 15 chr5 135258515 135258721 -64371429 + MIR SINE MIR 39 245 -17 1053 230 214 88 chr5 135258766 135259322 -64370828 - L2 LINE L2 -382 2932 2307 271 296 87 0 chr5 135259352 135259467 -64370683 - L2 LINE L2 -9 3304 3180 22 35 0 0 chr5 135260124 135260153 -64369997 + GC_rich Low_complexity Low_complexity 1 29 0 308 253 190 44 chr5 135260611 135260769 -64369381 + MIR SINE MIR 72 252 -10 224 376 12 0 chr5 135260783 135260868 -64369282 - L2 LINE L2 -14 3299 3214 462 240 92 56 chr5 135261007 135261203 -64368947 - Charlie8 DNA MER1_type -2214 203 1 969 276 97 21 chr5 135261300 135261795 -64368355 - L2 LINE L2 -204 3068 2533 2239 118 0 0 chr5 135262008 135262305 -64367845 + AluSx SINE Alu 5 301 -11 211 250 0 19 chr5 135262753 135262805 -64367345 - L2 LINE L2 -1 3312 3262 408 258 25 31 chr5 135263190 135263208 -64366942 - L1MA10 LINE L1 -2 6332 6315 858 241 65 20 chr5 135263208 135263502 -64366648 - L1ME2 LINE L1 -9 6155 5849 798 146 113 130 chr5 135263505 135263616 -64366534 - L1M4 LINE L1 -1538 4608 4497 1453 210 14 0 chr5 135263616 135263892 -64366258 - AluJo SINE Alu -32 280 1 798 146 113 130 chr5 135263892 135264081 -64366069 - L1M4 LINE L1 -1649 4497 4313 1283 177 30 76 chr5 135264084 135264452 -64365698 - L1MB7 LINE L1 -13 6171 5821 2381 88 0 0 chr5 135264454 135264751 -64365399 - AluY SINE Alu -14 297 1 1102 91 0 0 chr5 135264752 135264884 -64365266 - AluSg SINE Alu -178 132 1 1826 165 45 0 chr5 135264884 135265242 -64364908 - L1MB7 LINE L1 -353 5831 5458 3051 199 77 39 chr5 135265246 135265371 -64364779 - L1M4 LINE L1 -1818 4328 4209 2351 92 3 0 chr5 135265371 135265665 -64364485 + AluSg SINE Alu 1 295 -15 3051 199 77 39 chr5 135265665 135266385 -64363765 - L1M4 LINE L1 -1937 4209 3451 1127 168 0 0 chr5 135266390 135266557 -64363593 - AluJb SINE Alu -12 300 134 1794 174 3 25 chr5 135266557 135266874 -64363276 - AluJb SINE Alu -2 310 1 2259 107 3 3 chr5 135266884 135267194 -64362956 - AluSx SINE Alu -2 310 1 2363 228 48 7 chr5 135267194 135267889 -64362261 - L1M4 LINE L1 -2699 3447 2721 1085 196 0 0 chr5 135267897 135268081 -64362069 - AluJ SINE Alu 0 312 129 2587 88 0 0 chr5 135268093 135268432 -64361718 - L1PB1 LINE L1 -2 6149 5811 874 141 6 70 chr5 135268432 135268588 -64361562 - AluJ SINE Alu -166 146 1 2085 126 0 3 chr5 135268598 135268925 -64361225 - AluSx SINE Alu 0 326 1 22 56 0 0 chr5 135268929 135268965 -64361185 + AT_rich Low_complexity Low_complexity 1 36 0 828 171 47 29 chr5 135269000 135269170 -64360980 + AluJo SINE Alu 121 293 -19 184 263 0 0 chr5 135269178 135269216 -64360934 + L2 LINE L2 3217 3254 -18 24 0 0 0 chr5 135269238 135269262 -64360888 + AT_rich Low_complexity Low_complexity 1 24 0 502 301 164 74 chr5 135269521 135270176 -64359974 + L2 LINE L2 2559 3272 0 437 302 117 5 chr5 135270324 135270546 -64359604 - MIR SINE MIR -14 248 2 346 259 71 0 chr5 135271355 135271467 -64358683 - L1MC/D LINE L1 -2109 5699 5580 351 271 66 41 chr5 135271746 135271818 -64358332 - MIR SINE MIR -121 141 67 522 293 176 5 chr5 135271818 135272023 -64358127 + MIR SINE MIR 2 241 -21 250 154 0 0 chr5 135272329 135272368 -64357782 - MER20B DNA MER1_type 0 783 745 450 0 0 0 chr5 135272522 135272572 -64357578 + (TA)n Simple_repeat Simple_repeat 2 51 0 7848 37 1 0 chr5 135272573 135274287 -64355863 - L1PA5 LINE L1 0 6154 4433 1689 223 109 70 chr5 135274316 135275001 -64355149 - MER20B DNA MER1_type -71 712 1 377 343 0 9 chr5 135275205 135275313 -64354837 + MER5C DNA MER1_type 18 124 -200 342 345 139 38 chr5 135276178 135276625 -64353525 + L2 LINE L2 2813 3304 -9 445 296 106 11 chr5 135277045 135277234 -64352916 - MIR SINE MIR -10 252 46 664 175 25 0 chr5 135277238 135277358 -64352792 + FLAM_A SINE Alu 1 123 -10 2043 86 72 0 chr5 135277599 135277878 -64352272 + AluSq SINE Alu 3 301 -12 336 321 118 3 chr5 135278019 135278334 -64351816 + L1MC/D LINE L1 5293 5643 -2165 1920 144 0 7 chr5 135278450 135278767 -64351383 + AluSx SINE Alu 1 315 0 2135 133 0 0 chr5 135278769 135279070 -64351080 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr5 135279408 135279429 -64350721 + AT_rich Low_complexity Low_complexity 1 21 0 725 148 0 0 chr5 135279909 135280010 -64350140 - AluSp/q SINE Alu -51 262 162 611 200 39 22 chr5 135280658 135280838 -64349312 - L1MC5 LINE L1 -32 7929 7747 2090 139 22 14 chr5 135282567 135282934 -64347216 - L1MB4 LINE L1 0 6180 5811 2666 151 55 25 chr5 135282936 135283186 -64346964 - L1MB3 LINE L1 -7 6176 5935 2371 98 0 3 chr5 135283186 135283493 -64346657 + AluSx SINE Alu 5 310 -2 2666 151 55 25 chr5 135283493 135283804 -64346346 - L1MB3 LINE L1 -248 5935 5598 441 219 3 64 chr5 135283897 135284179 -64345971 - L1MD2 LINE L1 -5 7949 7651 239 0 32 0 chr5 135284179 135284210 -64345940 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2119 118 3 0 chr5 135284212 135284501 -64345649 - AluSc SINE Alu -19 290 1 441 219 3 64 chr5 135284501 135284650 -64345500 - L1MD2 LINE L1 -304 7650 6163 2140 224 67 15 chr5 135284654 135285252 -64344898 - L1MC4a LINE L1 -539 7269 6641 28 0 0 0 chr5 135285723 135285751 -64344399 + AT_rich Low_complexity Low_complexity 1 28 0 2192 121 7 0 chr5 135285772 135286069 -64344081 - AluSx SINE Alu -13 299 1 212 134 0 149 chr5 135286097 135286164 -64343986 + L3b LINE CR1 1434 1490 -93 2196 85 0 3 chr5 135286730 135287044 -64343106 - AluSg SINE Alu 0 313 1 712 207 207 0 chr5 135287508 135287687 -64342463 + MER58A DNA MER1_type 1 216 -8 21 0 0 0 chr5 135287772 135287793 -64342357 + AT_rich Low_complexity Low_complexity 1 21 0 2489 65 3 0 chr5 135289071 135289377 -64340773 - AluY SINE Alu -4 307 1 32 0 0 0 chr5 135289504 135289536 -64340614 + AT_rich Low_complexity Low_complexity 1 32 0 24 32 0 0 chr5 135290987 135291018 -64339132 + AT_rich Low_complexity Low_complexity 1 31 0 719 129 9 0 chr5 135295637 135295753 -64334397 - L1MB3 LINE L1 -10 6173 6057 2068 127 7 16 chr5 135295856 135296163 -64333987 - AluSx SINE Alu -8 304 1 185 317 125 0 chr5 135296744 135296864 -64333286 - L2 LINE L2 -1 3271 3137 2572 45 0 13 chr5 135297517 135297827 -64332323 + AluY SINE Alu 1 306 -5 2253 104 0 26 chr5 135298341 135298649 -64331501 + AluSx SINE Alu 1 300 -12 279 276 123 18 chr5 135299449 135299612 -64330538 - Charlie8 DNA MER1_type -2096 321 142 367 91 0 0 chr5 135299612 135299667 -64330483 - AluSq SINE Alu -2 299 245 1253 140 0 0 chr5 135299667 135299845 -64330305 - AluSq SINE Alu -135 178 1 29 47 0 0 chr5 135301701 135301744 -64328406 + AT_rich Low_complexity Low_complexity 1 43 0 2309 110 0 0 chr5 135301907 135302216 -64327934 + AluSx SINE Alu 1 309 -3 29 0 0 0 chr5 135302322 135302351 -64327799 + AT_rich Low_complexity Low_complexity 1 29 0 1410 163 80 49 chr5 135302982 135303270 -64326880 - AluSx SINE Alu -15 297 1 2318 68 14 17 chr5 135303384 135303679 -64326471 - AluSg SINE Alu -16 294 1 21 0 0 0 chr5 135304460 135304481 -64325669 + AT_rich Low_complexity Low_complexity 1 21 0 3175 73 0 0 chr5 135304958 135305370 -64324780 - L1PA14 LINE L1 -17 6144 5733 2208 103 3 17 chr5 135305381 135305758 -64324392 - AluSq SINE Alu 0 313 1 2187 119 3 0 chr5 135305819 135306113 -64324037 - AluSp SINE Alu -18 295 1 2416 76 16 0 chr5 135306430 135306733 -64323417 - AluY SINE Alu -3 308 1 983 127 162 9 chr5 135306740 135306969 -64323181 - L1MA5A LINE L1 0 6297 6034 1002 176 0 0 chr5 135306978 135307137 -64323013 - AluJo/FRAM SINE Alu -20 292 134 2260 116 7 0 chr5 135307137 135307440 -64322710 - AluSg SINE Alu -4 306 2 1840 180 14 0 chr5 135308689 135308984 -64321166 - AluJo SINE Alu -12 300 2 186 295 181 40 chr5 135309361 135309501 -64320649 - L2 LINE L2 -430 2884 2765 1586 172 66 0 chr5 135309501 135309774 -64320376 - AluJb SINE Alu -21 291 1 186 295 181 40 chr5 135309774 135309802 -64320348 - L2 LINE L2 -549 2765 2742 2185 95 0 11 chr5 135309802 135310114 -64320036 + AluSc SINE Alu 1 309 0 186 295 181 40 chr5 135310114 135310168 -64319982 - L2 LINE L2 -572 2742 2626 2358 93 0 13 chr5 135310487 135310799 -64319351 + AluSx SINE Alu 1 308 -4 2394 92 3 0 chr5 135311533 135311839 -64318311 - AluSx SINE Alu -5 307 1 3611 145 23 30 chr5 135312528 135312988 -64317162 - L1MB7 LINE L1 -2 6182 5727 1989 144 27 0 chr5 135312988 135313280 -64316870 - AluJb SINE Alu -12 300 1 3611 145 23 30 chr5 135313280 135313523 -64316627 - L1MB7 LINE L1 -457 5727 5484 729 0 0 0 chr5 135313568 135313649 -64316501 + (CA)n Simple_repeat Simple_repeat 2 82 0 322 184 78 19 chr5 135313805 135313908 -64316242 - L1MC5 LINE L1 -36 7925 7817 299 178 27 14 chr5 135314295 135314368 -64315782 - HAL1 LINE L1 -359 2148 2075 23 33 0 0 chr5 135314733 135314763 -64315387 + AT_rich Low_complexity Low_complexity 1 30 0 419 327 18 42 chr5 135315370 135315535 -64314615 + MIR SINE MIR 43 203 -59 2192 258 99 96 chr5 135315596 135317377 -64312773 + L2 LINE L2 1511 3313 0 206 211 39 0 chr5 135318305 135318357 -64311793 - L2 LINE L2 -210 3062 3009 517 127 18 82 chr5 135318684 135318794 -64311356 + MER5A DNA MER1_type 4 106 -83 273 283 226 12 chr5 135318864 135319271 -64310879 - L1ME4a LINE L1 0 6121 5628 458 216 23 91 chr5 135321085 135321261 -64308889 - MIR3 SINE MIR -23 185 22 669 131 0 0 chr5 135321422 135321529 -64308621 + (CA)n Simple_repeat Simple_repeat 2 108 0 1917 136 31 3 chr5 135321540 135321826 -64308324 + AluJb SINE Alu 3 296 -16 326 231 15 0 chr5 135322541 135322606 -64307544 - L2 LINE L2 0 3272 3207 1718 156 30 36 chr5 135324061 135324363 -64305787 - AluJb SINE Alu -12 300 1 2557 62 0 3 chr5 135324707 135325011 -64305139 - AluY SINE Alu -6 305 3 1818 119 7 43 chr5 135325117 135325395 -64304755 - AluJb SINE Alu -44 268 1 2578 154 41 20 chr5 135325444 135325591 -64304559 - L1MA8 LINE L1 -7 6284 6141 2294 110 0 3 chr5 135325591 135325890 -64304260 - AluSx SINE Alu -14 298 1 2578 154 41 20 chr5 135325890 135326235 -64303915 - L1MA8 LINE L1 -150 6141 5782 976 255 86 126 chr5 135326384 135327083 -64303067 - MER77 LTR ERV1 -6 599 24 379 256 108 8 chr5 135328053 135328182 -64301968 + MIR SINE MIR 73 214 -48 592 257 112 14 chr5 135328222 135328436 -64301714 + MIR SINE MIR 5 239 -23 259 271 70 0 chr5 135328647 135328776 -64301374 - LTR67 LTR ERVL -8 549 412 192 77 0 0 chr5 135329717 135329743 -64300407 + (CACCAT)n Simple_repeat Simple_repeat 5 30 0 2918 178 29 7 chr5 135329962 135330507 -64299643 - MER41D LTR ERV1 0 557 1 221 216 0 0 chr5 135330864 135330915 -64299235 + L2 LINE L2 2390 2440 -874 286 164 164 95 chr5 135331005 135331121 -64299029 + L1MC5 LINE L1 7788 7911 -50 224 200 42 21 chr5 135331159 135331254 -64298896 + (TA)n Simple_repeat Simple_repeat 1 97 0 396 295 193 21 chr5 135331296 135331935 -64298215 + L2 LINE L2 2556 3313 0 234 214 41 61 chr5 135335584 135335682 -64294468 + L3 LINE CR1 1392 1487 -90 193 329 0 43 chr5 135335725 135335795 -64294355 + MIR SINE MIR 9 75 -187 202 254 17 17 chr5 135335836 135335895 -64294255 + MIR SINE MIR 76 134 -74 372 261 0 26 chr5 135337265 135337380 -64292770 - MIR SINE MIR -48 214 103 216 182 80 91 chr5 135338380 135338468 -64291682 + MIR SINE MIR 8 94 -168 568 168 0 44 chr5 135339848 135339984 -64290166 - FLAM_A SINE Alu 0 142 25 2014 67 3 71 chr5 135340736 135341019 -64289131 - AluSp SINE Alu -47 266 3 423 198 0 12 chr5 135341915 135341996 -64288154 + L2 LINE L2 3191 3270 -2 183 224 0 61 chr5 135341989 135342038 -64288112 + MIR3 SINE MIR 156 201 -7 * 1673 195 78 52 chr5 135342975 135343292 -64286858 - L1ME1 LINE L1 -5 6161 5829 2540 75 0 10 chr5 135343292 135343597 -64286553 - AluSp SINE Alu -10 303 2 1673 195 78 52 chr5 135343597 135343705 -64286445 - L1ME1 LINE L1 -337 5829 5725 * 2556 36 2 0 chr5 135343700 135344134 -64286016 - L1PA5 LINE L1 -589 5565 5131 4935 38 0 7 chr5 135344134 135344709 -64285441 + L1PA5 LINE L1 5574 6150 -4 1430 206 101 87 chr5 135344709 135345193 -64284957 - L1ME1 LINE L1 -426 5740 5237 1733 176 36 3 chr5 135345193 135345494 -64284656 - AluJo SINE Alu 0 312 2 1430 206 101 87 chr5 135345494 135345824 -64284326 - L1ME1 LINE L1 -929 5237 4913 257 217 0 0 chr5 135345972 135346018 -64284132 + L2 LINE L2 3209 3254 -18 214 267 0 0 chr5 135346102 135346147 -64284003 - L2 LINE L2 -61 3252 3208 889 172 46 0 chr5 135346320 135346471 -64283679 + FAM SINE Alu 1 158 -17 303 250 75 17 chr5 135346897 135347017 -64283133 + MIR3 SINE MIR 2 128 -80 2233 209 23 19 chr5 135347754 135348238 -64281912 + L1MD2 LINE L1 5850 6335 -24 1924 170 39 0 chr5 135348794 135349129 -64281021 + MER7A DNA MER2_type 1 346 0 370 236 8 65 chr5 135349602 135349725 -64280425 + MER5B DNA MER1_type 4 119 -59 2318 107 0 0 chr5 135349789 135350088 -64280062 + AluSx SINE Alu 1 299 -13 24 32 0 0 chr5 135351345 135351376 -64278774 + AT_rich Low_complexity Low_complexity 1 31 0 8846 97 35 6 chr5 135351760 135353024 -64277126 - HSMAR2 DNA Mariner 0 1302 2 375 292 142 24 chr5 135353326 135353658 -64276492 - L2 LINE L2 -1077 2237 1867 344 244 138 19 chr5 135353754 135353914 -64276236 + MER112 DNA MER1_type 72 250 -10 255 186 0 57 chr5 135353990 135354060 -64276090 - L2 LINE L2 -2685 629 564 754 243 84 4 chr5 135354727 135354953 -64275197 + MIR SINE MIR 18 261 -1 26 64 0 0 chr5 135355024 135355071 -64275079 + AT_rich Low_complexity Low_complexity 1 47 0 2074 131 16 7 chr5 135355591 135355896 -64274254 - AluSx SINE Alu -4 308 1 1328 197 124 135 chr5 135356854 135357402 -64272748 + MLT1F LTR MaLR 1 542 0 2233 104 3 10 chr5 135357653 135357951 -64272199 - AluSx SINE Alu -16 296 1 705 278 143 56 chr5 135358062 135358544 -64271606 - MLT1G1 LTR MaLR 0 595 72 887 177 17 61 chr5 135359173 135359354 -64270796 - AluJo SINE Alu -31 281 109 428 248 120 0 chr5 135359375 135359508 -64270642 + MIR3 SINE MIR 38 186 -22 783 265 233 5 chr5 135359719 135360096 -64270054 - L2 LINE L2 -44 3269 2807 805 172 12 6 chr5 135360391 135360554 -64269596 + L1MA7 LINE L1 6126 6289 -2 22 56 0 0 chr5 135360595 135360631 -64269519 + AT_rich Low_complexity Low_complexity 1 36 0 1914 112 12 4 chr5 135360641 135360899 -64269251 - AluSq SINE Alu -53 260 1 3805 53 0 6 chr5 135361268 135361740 -64268410 + L1PA7 LINE L1 5683 6151 -3 21 0 0 0 chr5 135361740 135361761 -64268389 + AT_rich Low_complexity Low_complexity 1 21 0 1551 218 46 11 chr5 135362161 135362533 -64267617 - L1MD3 LINE L1 -2 7993 7609 * 1825 175 18 23 chr5 135362529 135362872 -64267278 + L1MC4a LINE L1 7092 7432 -376 2202 133 0 3 chr5 135363859 135364168 -64265982 - AluSq SINE Alu -5 308 1 2151 117 13 0 chr5 135364644 135364944 -64265206 - AluSx SINE Alu -8 304 1 1559 177 38 14 chr5 135364947 135365235 -64264915 - AluJo SINE Alu -17 295 1 10025 83 9 1 chr5 135365283 135366659 -64263491 + L1P LINE L1 2690 4077 -2069 310 262 48 0 chr5 135366883 135366967 -64263183 - MER117 DNA MER1_type -42 155 68 24 32 0 0 chr5 135367122 135367153 -64262997 + AT_rich Low_complexity Low_complexity 1 31 0 745 200 127 36 chr5 135367916 135368136 -64262014 + MIR SINE MIR 2 241 -21 22 56 0 0 chr5 135368179 135368215 -64261935 + AT_rich Low_complexity Low_complexity 1 36 0 210 299 52 52 chr5 135368564 135368661 -64261489 - MIR3 SINE MIR -97 111 15 21 71 0 0 chr5 135368812 135368854 -64261296 + AT_rich Low_complexity Low_complexity 1 42 0 2156 129 0 10 chr5 135369101 135369412 -64260738 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr5 135369436 135369458 -64260692 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr5 135369629 135369657 -64260493 + AT_rich Low_complexity Low_complexity 1 28 0 243 223 151 36 chr5 135369661 135369800 -64260350 - L1MA6 LINE L1 -375 5925 5771 2231 116 0 0 chr5 135370710 135371024 -64259126 + AluSq SINE Alu 1 313 0 2590 56 0 3 chr5 135371025 135371331 -64258819 + AluY SINE Alu 1 305 -6 2685 164 69 2 chr5 135371604 135372124 -64258026 + L1MB7 LINE L1 5630 6184 0 1977 135 25 0 chr5 135372154 135372435 -64257715 + AluJb SINE Alu 1 288 -24 252 313 21 21 chr5 135372448 135372544 -64257606 + MER5B DNA MER1_type 60 155 -23 246 242 81 71 chr5 135372872 135372971 -64257179 - MIR SINE MIR -59 149 50 524 281 54 68 chr5 135373125 135373196 -64256954 - MIR SINE MIR -14 248 178 2177 106 23 10 chr5 135373196 135373498 -64256652 - AluSx SINE Alu -6 306 1 524 281 54 68 chr5 135373498 135373647 -64256503 - MIR SINE MIR -84 178 31 1146 182 124 46 chr5 135374061 135374368 -64255782 + MER2 DNA MER2_type 1 331 -14 232 127 99 99 chr5 135375181 135375252 -64254898 + Charlie7 DNA MER1_type 39 109 -2503 188 204 0 45 chr5 135377010 135377054 -64253096 + MIR SINE MIR 209 250 -12 2428 90 3 0 chr5 135377968 135378279 -64251871 - AluSp SINE Alu -1 312 1 406 234 152 22 chr5 135378581 135378765 -64251385 - L1ME3A LINE L1 -233 5920 5713 265 309 105 6 chr5 135378822 135378984 -64251166 - L1ME3A LINE L1 -553 5594 5417 815 261 0 0 chr5 135379000 135379165 -64250985 - FRAM SINE Alu -1 165 1 662 271 108 35 chr5 135379167 135379385 -64250765 - L1ME3A LINE L1 -838 5291 5090 397 0 19 19 chr5 135379385 135379439 -64250711 + (TC)n Simple_repeat Simple_repeat 2 55 0 318 80 0 0 chr5 135379438 135379488 -64250662 + (TA)n Simple_repeat Simple_repeat 1 50 0 * 662 271 108 35 chr5 135379439 135379512 -64250638 - L1ME3A LINE L1 -1039 5090 5024 2408 62 0 3 chr5 135379512 135379802 -64250348 - AluY SINE Alu -18 293 5 662 271 108 35 chr5 135379802 135380079 -64250071 - L1ME3A LINE L1 -1105 5024 4733 349 267 27 47 chr5 135380103 135380253 -64249897 - L1ME3A LINE L1 -3961 2168 2022 2427 137 66 15 chr5 135380255 135380663 -64249487 - Tigger2a DNA MER2_type 0 434 6 805 233 57 0 chr5 135380737 135380913 -64249237 + MER5A DNA MER1_type 1 186 -3 685 270 111 21 chr5 135381074 135381627 -64248523 - L1MEd LINE L1 -892 1598 1067 1909 155 7 13 chr5 135381757 135382060 -64248090 - AluSx SINE Alu -11 301 1 353 172 4 0 chr5 135382132 135382199 -64247951 - Alu SINE Alu -251 52 2 564 287 124 73 chr5 135382234 135382798 -64247352 - L1MEd LINE L1 -5273 846 231 2164 101 3 10 chr5 135382798 135383086 -64247064 + AluSx SINE Alu 1 286 -26 564 287 124 73 chr5 135383086 135383285 -64246865 - L1MEd LINE L1 -5888 231 44 23 0 0 0 chr5 135383629 135383652 -64246498 + AT_rich Low_complexity Low_complexity 1 23 0 1608 159 101 4 chr5 135384219 135384495 -64245655 + AluJo SINE Alu 2 304 -8 2809 3 0 0 chr5 135384688 135384987 -64245163 - AluYa5 SINE Alu -12 299 1 4686 104 51 19 chr5 135385014 135385506 -64244644 - L1MA3 LINE L1 0 6305 5781 1698 115 127 0 chr5 135385506 135385766 -64244384 - AluSx SINE Alu -16 296 4 4686 104 51 19 chr5 135385766 135385994 -64244156 - L1MA3 LINE L1 -524 5781 5562 246 263 0 0 chr5 135386014 135386071 -64244079 + MIR SINE MIR 87 143 -119 1920 133 0 31 chr5 135386472 135386766 -64243384 - AluSx SINE Alu -11 301 17 2825 269 141 29 chr5 135387077 135388165 -64241985 - L2 LINE L2 -284 3029 1799 2316 95 0 3 chr5 135388165 135388471 -64241679 + AluSp SINE Alu 1 305 -8 2825 269 141 29 chr5 135388471 135388566 -64241584 - L2 LINE L2 -1514 1799 1716 2226 94 10 3 chr5 135389645 135389942 -64240208 - AluSq SINE Alu -14 299 1 1501 65 48 0 chr5 135390353 135390539 -64239611 + MER107 DNA MER1_type 3 197 0 2153 126 3 0 chr5 135390720 135391021 -64239129 - AluSx SINE Alu -10 302 1 839 196 0 0 chr5 135391328 135391471 -64238679 - FRAM SINE Alu -33 143 1 798 270 144 36 chr5 135392144 135392693 -64237457 - L1ME LINE L1 -301 5820 5331 2289 112 0 13 chr5 135392693 135393006 -64237144 - AluSx SINE Alu -3 309 1 798 270 144 36 chr5 135393006 135393170 -64236980 - L1ME LINE L1 -790 5331 5186 1744 156 4 4 chr5 135393170 135393440 -64236710 - AluJb SINE Alu -5 307 38 798 270 144 36 chr5 135393440 135393623 -64236527 - L1ME LINE L1 -935 5186 4804 560 308 92 48 chr5 135393625 135394598 -64235552 - L1ME LINE L1 -1450 4696 3682 365 299 113 17 chr5 135394759 135394936 -64235214 + MIR SINE MIR 69 262 0 48 60 0 0 chr5 135396607 135396690 -64233460 + AT_rich Low_complexity Low_complexity 1 83 0 2145 103 6 28 chr5 135397114 135397433 -64232717 - AluSx SINE Alu 0 312 1 301 208 56 14 chr5 135398135 135398207 -64231943 - HsTC2 DNA Tc2 -25 1873 1799 2444 77 13 0 chr5 135398676 135398976 -64231174 + AluSq SINE Alu 1 304 -9 195 279 59 0 chr5 135402468 135402536 -64227614 + MIR3 SINE MIR 99 170 -38 * 243 271 148 32 chr5 135402528 135402683 -64227467 - L3 LINE CR1 -15 1562 1390 383 138 35 0 chr5 135403119 135403177 -64226973 + MER105 DNA DNA 1 60 -144 600 231 45 8 chr5 135403178 135403312 -64226838 + MLT1D LTR MaLR 1 139 -366 326 283 102 23 chr5 135403365 135403542 -64226608 + L1M4 LINE L1 3750 3940 -2206 539 248 57 32 chr5 135403795 135403952 -64226198 + L2 LINE L2 358 518 -2796 830 230 64 0 chr5 135403995 135404199 -64225951 + MIR SINE MIR 36 252 -10 1317 243 141 38 chr5 135404225 135404377 -64225773 + L2 LINE L2 573 708 -2606 1764 138 4 0 chr5 135404377 135404631 -64225519 - AluSx SINE Alu -17 295 41 1317 243 141 38 chr5 135404631 135405010 -64225140 + L2 LINE L2 708 1159 -2155 588 221 38 0 chr5 135405015 135405146 -64225004 + L2 LINE L2 2076 2211 -1103 910 297 129 15 chr5 135405146 135405479 -64224671 - LTR16C LTR ERVL 0 491 121 1141 169 31 36 chr5 135405490 135405715 -64224435 + AluJb SINE Alu 87 310 -2 1511 233 92 46 chr5 135405801 135406135 -64224015 + L2 LINE L2 2212 2576 -738 2370 134 3 23 chr5 135406135 135406479 -64223671 - MER1B DNA MER1_type 0 337 1 1511 233 92 46 chr5 135406479 135406625 -64223525 + L2 LINE L2 2576 2714 -600 726 269 41 14 chr5 135406625 135406844 -64223306 + L1MC4a LINE L1 6379 6603 -1205 7314 189 53 36 chr5 135406862 135408653 -64221497 + L1M4 LINE L1 -246 1617 -4767 1274 191 37 8 chr5 135408659 135408900 -64221250 - AluJo SINE Alu -64 248 1 824 229 103 63 chr5 135408900 135409140 -64221010 + L1M4 LINE L1 1606 1835 -4728 2374 84 0 3 chr5 135409140 135409439 -64220711 + AluSq SINE Alu 1 298 -15 824 229 103 63 chr5 135409439 135409696 -64220454 + L1M4 LINE L1 1835 2281 -4282 4253 235 54 18 chr5 135409704 135410827 -64219323 + L1MC4a LINE L1 6638 7801 -7 1308 234 119 32 chr5 135410844 135411058 -64219092 + L2 LINE L2 2702 2896 -417 1798 199 42 22 chr5 135411058 135411414 -64218736 + MLT1A1 LTR MaLR 1 363 -2 1308 234 119 32 chr5 135411414 135411753 -64218397 + L2 LINE L2 2896 3313 0 657 192 0 0 chr5 135411835 135411939 -64218211 + AluJb SINE Alu 2 105 -207 993 166 16 57 chr5 135412122 135412315 -64217835 + AluJb SINE Alu 106 290 -22 2002 156 7 0 chr5 135412340 135412648 -64217502 + AluJb SINE Alu 1 310 -2 336 224 103 28 chr5 135412686 135412793 -64217357 + L1ME4a LINE L1 5949 6063 -58 267 193 80 0 chr5 135412833 135412921 -64217229 + L1ME4a LINE L1 5840 5934 -187 717 249 141 14 chr5 135413070 135413367 -64216783 + HAL1 LINE L1 47 381 -2126 526 291 198 20 chr5 135413419 135413764 -64216386 + HAL1 LINE L1 475 906 -1601 1697 148 43 7 chr5 135413764 135414042 -64216108 - AluJo SINE Alu -22 290 3 526 291 198 20 chr5 135414042 135414105 -64216045 + HAL1 LINE L1 906 956 -1551 261 211 127 49 chr5 135414190 135414332 -64215818 + HAL1 LINE L1 1114 1266 -1241 247 310 23 46 chr5 135414385 135414559 -64215591 + L1MC4a LINE L1 5871 6040 -1768 1240 142 4 49 chr5 135414582 135414807 -64215343 + Tigger2a DNA MER2_type 1 215 -219 2674 39 0 3 chr5 135414808 135415115 -64215035 - AluY SINE Alu -5 306 1 350 219 9 38 chr5 135415115 135415220 -64214930 - LTR40a LTR ERVL -416 103 2 385 285 121 89 chr5 135415622 135416159 -64213991 + L1M2 LINE L1 554 1254 -5595 631 90 0 0 chr5 135416185 135416284 -64213866 + AluSp/q SINE Alu 208 306 0 22 0 0 0 chr5 135416402 135416424 -64213726 + AT_rich Low_complexity Low_complexity 1 22 0 334 266 106 26 chr5 135416561 135416674 -64213476 + L2 LINE L2 3151 3272 0 1162 101 134 14 chr5 135417094 135417303 -64212847 + L1MA8 LINE L1 6058 6291 0 453 223 16 16 chr5 135417548 135417669 -64212481 + L1ME4a LINE L1 5764 5884 -237 2298 104 16 7 chr5 135418550 135418858 -64211292 + AluSq SINE Alu 1 311 -2 835 301 66 96 chr5 135418879 135419266 -64210884 - L2 LINE L2 -633 2681 2317 2524 68 0 16 chr5 135419266 135419576 -64210574 + AluSc SINE Alu 1 305 -4 835 301 66 96 chr5 135419576 135419793 -64210357 - L2 LINE L2 -997 2317 2095 211 241 142 85 chr5 135419868 135419893 -64210257 - MIR SINE MIR 0 262 240 2190 189 43 57 chr5 135419893 135420405 -64209745 + MLT1D LTR MaLR 1 505 0 211 241 142 85 chr5 135420405 135420520 -64209630 - MIR SINE MIR -22 240 114 343 273 128 31 chr5 135420559 135420786 -64209364 - L2 LINE L2 -1396 1918 1670 192 214 71 36 chr5 135420791 135420847 -64209303 + L2 LINE L2 3256 3313 0 629 180 22 22 chr5 135421193 135421332 -64208818 + L1MC2 LINE L1 6191 6329 -15 2302 129 54 14 chr5 135421922 135422272 -64207878 + THE1B LTR MaLR 1 364 0 9737 96 16 9 chr5 135422272 135423838 -64206312 + THE1B-int LTR MaLR 1 1580 0 2307 121 93 3 chr5 135423840 135424172 -64205978 + THE1B LTR MaLR 3 364 0 555 208 186 27 chr5 135424183 135424366 -64205784 - L1MC4 LINE L1 -132 7910 7699 622 211 14 79 chr5 135424388 135424567 -64205583 + MLT1E2 LTR MaLR 1 169 -336 595 201 51 19 chr5 135424570 135424699 -64205451 + L1MC1 LINE L1 6210 7995 0 317 283 42 0 chr5 135424799 135424919 -64205231 - L1MEc LINE L1 -3918 2478 2354 372 222 25 49 chr5 135424939 135425101 -64205049 - L1MEc LINE L1 -5369 1027 870 553 175 48 8 chr5 135425172 135425298 -64204852 - L1M4 LINE L1 -2177 3969 3839 1351 226 106 6 chr5 135425304 135425644 -64204506 - L1MC4 LINE L1 -301 7741 7368 1385 181 0 0 chr5 135425646 135425872 -64204278 - AluJb SINE Alu -15 297 72 596 215 105 6 chr5 135425875 135426047 -64204103 - L1MC4 LINE L1 -683 7359 7171 6332 116 23 1 chr5 135426079 135426995 -64203155 + Tigger1 DNA MER2_type 70 1005 -1413 373 248 72 8 chr5 135427023 135427148 -64203002 - L1MC4 LINE L1 -870 7172 7040 470 204 44 44 chr5 135427249 135427386 -64202764 - L1MEc LINE L1 -2171 4044 3908 2481 231 86 6 chr5 135427397 135428093 -64202057 - L1MEc LINE L1 -3145 3070 2319 1423 194 59 28 chr5 135428112 135428503 -64201647 - L1MEc LINE L1 -5369 1027 625 762 286 78 24 chr5 135428517 135428888 -64201262 - L1MEc LINE L1 -4654 1742 1352 * 872 300 87 48 chr5 135428885 135428996 -64201154 - L1MEc LINE L1 -5218 990 885 2128 101 0 61 chr5 135428996 135429324 -64200826 + AluSg SINE Alu 1 308 -2 872 300 87 48 chr5 135429324 135430188 -64199962 - L1MEc LINE L1 -5323 885 20 250 313 141 43 chr5 135430270 135430526 -64199624 - L2 LINE L2 -6 3266 2986 291 306 183 9 chr5 135430630 135430849 -64199301 - L2 LINE L2 -511 2803 2547 1741 150 144 9 chr5 135432049 135432376 -64197774 - MSTA LTR MaLR 0 428 58 5077 165 108 1 chr5 135432382 135433277 -64196873 - MSTA-int LTR MaLR -660 991 1 2377 108 159 5 chr5 135433277 135433647 -64196503 - MSTA LTR MaLR 0 428 2 3717 265 175 28 chr5 135433651 135435345 -64194805 + L2 LINE L2 1065 3001 -312 3025 284 119 19 chr5 135435356 135435886 -64194264 - L2 LINE L2 -610 2704 2229 2073 131 7 7 chr5 135435886 135436183 -64193967 + AluSx SINE Alu 1 297 -15 3025 284 119 19 chr5 135436183 135436945 -64193205 - L2 LINE L2 -1085 2229 1282 243 0 0 0 chr5 135437300 135437327 -64192823 + (TG)n Simple_repeat Simple_repeat 2 28 0 694 213 0 8 chr5 135437456 135437583 -64192567 - FLAM_A SINE Alu -7 126 1 518 213 204 33 chr5 135437746 135437986 -64192164 + L1ME4a LINE L1 5838 6118 -3 224 246 62 15 chr5 135438396 135438461 -64191689 - MIR SINE MIR -40 222 155 858 170 0 61 chr5 135438461 135438626 -64191524 - AluJb SINE Alu -21 291 137 2371 76 0 19 chr5 135438636 135438950 -64191200 - AluSx SINE Alu -4 308 1 386 274 110 14 chr5 135438950 135439096 -64191054 - MIR SINE MIR -100 162 3 531 208 16 16 chr5 135440723 135440848 -64189302 + Charlie1 DNA MER1_type 102 226 -2535 533 183 61 9 chr5 135440856 135440971 -64189179 + Charlie1 DNA MER1_type 2636 2756 -5 1444 167 73 24 chr5 135441521 135441563 -64188587 - L1MB3 LINE L1 0 6183 6144 2380 66 0 0 chr5 135441563 135441852 -64188298 + AluY SINE Alu 1 289 -22 1444 167 73 24 chr5 135441852 135442138 -64188012 - L1MB3 LINE L1 -39 6144 5839 1917 140 20 66 chr5 135442141 135442491 -64187659 + MER1B DNA MER1_type 6 339 0 2806 166 32 10 chr5 135442491 135442990 -64187160 - L1MB3 LINE L1 -341 5842 5329 2425 87 0 3 chr5 135442990 135443290 -64186860 - AluSg SINE Alu -11 299 1 2806 166 32 10 chr5 135443290 135443313 -64186837 - L1MB3 LINE L1 -854 5329 5308 552 156 21 0 chr5 135443311 135443407 -64186743 - L1ME1 LINE L1 -5 6161 6064 * 2407 49 7 16 chr5 135443412 135443717 -64186433 - AluY SINE Alu -9 302 1 484 233 94 97 chr5 135444020 135444384 -64185766 + L1MC4 LINE L1 7301 7730 -303 1829 100 4 0 chr5 135444384 135444623 -64185527 + AluY SINE Alu 47 286 -25 484 233 94 97 chr5 135444623 135444795 -64185355 + L1MC4 LINE L1 7730 7901 -132 2280 73 31 0 chr5 135445057 135445374 -64184776 - AluSc SINE Alu 0 309 1 3094 142 73 25 chr5 135445473 135446021 -64184129 - MER6A DNA MER2_type -30 575 2 2368 88 0 0 chr5 135446751 135447047 -64183103 + AluSc SINE Alu 1 296 -13 322 290 58 36 chr5 135447150 135447288 -64182862 + L1ME LINE L1 5678 5818 -303 21 0 0 0 chr5 135447780 135447801 -64182349 + AT_rich Low_complexity Low_complexity 1 21 0 2444 71 0 0 chr5 135448019 135448313 -64181837 + AluSg SINE Alu 1 294 -16 3338 150 87 18 chr5 135448336 135448901 -64181249 - MER6A DNA MER2_type -1 604 1 642 149 0 0 chr5 135449128 135449222 -64180928 - FLAM_A SINE Alu -12 130 37 24 0 0 0 chr5 135449277 135449301 -64180849 + AT_rich Low_complexity Low_complexity 1 24 0 1978 137 3 0 chr5 135449301 135449585 -64180565 - AluSx SINE Alu -27 285 1 3277 188 47 9 chr5 135449594 135450292 -64179858 - L1MC3 LINE L1 0 7785 7061 2329 85 0 3 chr5 135450335 135450629 -64179521 - AluY SINE Alu -18 293 1 3031 112 42 23 chr5 135450752 135451227 -64178923 + L1MB2 LINE L1 5684 6167 -4 261 210 0 16 chr5 135451338 135451400 -64178750 + Charlie8 DNA MER1_type 81 141 -2276 198 0 0 0 chr5 135451401 135451423 -64178727 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1169 109 13 0 chr5 135451427 135451610 -64178540 - AluSg/x SINE Alu 0 308 124 466 248 23 15 chr5 135451612 135451745 -64178405 + Charlie8 DNA MER1_type 132 265 -2152 1285 177 18 4 chr5 135451776 135452002 -64178148 - AluJo SINE Alu -83 229 1 356 326 140 32 chr5 135452941 135453220 -64176930 + MLT1K LTR MaLR 90 398 -190 369 296 0 9 chr5 135453251 135453359 -64176791 + MLT1K LTR MaLR 481 587 -1 26 50 0 0 chr5 135453683 135453723 -64176427 + AT_rich Low_complexity Low_complexity 1 40 0 194 246 196 43 chr5 135454423 135454561 -64175589 + L3 LINE CR1 1365 1523 -54 444 134 0 12 chr5 135455083 135455165 -64174985 - L1MA8 LINE L1 -4 6287 6207 182 296 125 0 chr5 135456123 135456211 -64173939 + L2 LINE L2 3212 3310 -3 200 206 222 0 chr5 135456675 135456738 -64173412 - L2 LINE L2 -1 3312 3236 381 242 42 0 chr5 135457148 135457243 -64172907 - L2 LINE L2 -22 3291 3193 27 49 0 0 chr5 135457750 135457791 -64172359 + AT_rich Low_complexity Low_complexity 1 41 0 1721 163 54 0 chr5 135458134 135458428 -64171722 + AluJo SINE Alu 1 310 -2 1775 174 0 17 chr5 135458595 135458893 -64171257 - AluJo SINE Alu -13 299 7 2090 143 0 7 chr5 135458900 135459229 -64170921 - AluSx SINE Alu 0 312 1 273 57 0 0 chr5 135459231 135459266 -64170884 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2183 102 0 3 chr5 135459266 135459549 -64170601 - AluY SINE Alu -27 284 3 808 215 0 0 chr5 135459553 135459683 -64170467 - FLAM_A SINE Alu -12 130 1 542 309 44 32 chr5 135459921 135460170 -64169980 - HERV16 LTR ERVL -2939 2057 1806 * 656 364 60 41 chr5 135460165 135460918 -64169232 - HERV16 LTR ERVL -3927 1837 1071 615 325 37 65 chr5 135460992 135461011 -64169139 - HERV16 LTR ERVL -4181 815 797 2455 215 137 28 chr5 135461011 135461728 -64168422 + LTR50 LTR ERVL 1 795 0 615 325 37 65 chr5 135461728 135462142 -64168008 - HERV16 LTR ERVL -4199 797 394 848 274 49 113 chr5 135462681 135463205 -64166945 + L1ME3 LINE L1 3410 3875 -2271 2324 93 3 0 chr5 135463205 135463505 -64166645 + AluSq SINE Alu 1 301 -12 848 274 49 113 chr5 135463505 135463714 -64166436 + L1ME3 LINE L1 3875 4096 -2050 484 268 174 0 chr5 135463724 135463862 -64166288 + MER91B DNA MER1_type 29 190 0 375 283 68 64 chr5 135463875 135464186 -64165964 + L1ME3 LINE L1 4105 4416 -1730 666 168 161 74 chr5 135464206 135464355 -64165795 + FRAM SINE Alu 4 165 -11 558 251 149 14 chr5 135464357 135464632 -64165518 + L1ME3 LINE L1 4406 4717 -1429 1867 162 0 7 chr5 135464634 135464961 -64165189 + AluSx SINE Alu 1 325 0 1160 152 66 33 chr5 135465033 135465244 -64164906 + MER20 DNA MER1_type 1 218 -1 980 271 90 44 chr5 135465313 135465792 -64164358 - LTR33 LTR ERVL -16 505 5 1169 267 70 20 chr5 135465801 135466396 -64163754 + L1ME3 LINE L1 5083 5714 -456 1119 127 44 48 chr5 135466394 135466506 -64163644 - L1MC3 LINE L1 0 7785 7674 * 2026 118 26 23 chr5 135466506 135466811 -64163339 - AluSg SINE Alu -4 306 1 1119 127 44 48 chr5 135466811 135466926 -64163224 - L1MC3 LINE L1 -111 7674 7559 2188 103 0 35 chr5 135466970 135467282 -64162868 + AluSq SINE Alu 1 301 -12 504 279 10 24 chr5 135467288 135467496 -64162654 + L1ME3 LINE L1 5743 5947 -223 293 225 123 33 chr5 135467520 135467728 -64162422 + L1ME3 LINE L1 5919 6141 -21 462 240 67 48 chr5 135468358 135468566 -64161584 - L2 LINE L2 0 3313 3102 459 318 61 0 chr5 135468564 135468712 -64161438 + MIR SINE MIR 29 185 -77 * 1023 242 113 35 chr5 135468709 135469251 -64160899 - L2 LINE L2 0 3313 2694 1955 155 0 0 chr5 135469251 135469542 -64160608 - AluJb SINE Alu -20 292 2 1023 242 113 35 chr5 135469542 135469686 -64160464 - L2 LINE L2 -619 2694 2563 190 286 143 29 chr5 135471159 135471264 -64158886 + L2 LINE L2 3156 3272 0 1635 170 26 22 chr5 135471356 135471667 -64158483 - AluJb SINE Alu 0 312 1 385 260 47 33 chr5 135472084 135472139 -64158011 - MIR SINE MIR -67 195 142 2351 90 45 53 chr5 135472139 135472517 -64157633 - THE1C LTR MaLR 0 375 1 385 260 47 33 chr5 135472517 135472611 -64157539 - MIR SINE MIR -120 142 44 3776 123 61 28 chr5 135672685 135673392 -63956758 + Tigger3(Golem) DNA MER2_type 2299 3028 -1 613 154 73 59 chr5 135673395 135673507 -63956643 - MLT1B LTR MaLR -3 387 271 2249 104 0 0 chr5 135673507 135673816 -63956334 - AluSc SINE Alu 0 309 1 613 154 73 59 chr5 135673816 135673839 -63956311 - MLT1B LTR MaLR -119 271 250 1408 122 43 141 chr5 135673963 135674290 -63955860 + AluSg SINE Alu 2 296 -4 2259 197 29 6 chr5 135674622 135675100 -63955050 + L1PB4 LINE L1 5668 6156 0 28 91 0 0 chr5 135675100 135675177 -63954973 + AT_rich Low_complexity Low_complexity 1 77 0 300 95 0 0 chr5 135675254 135675296 -63954854 - L1P LINE L1 -1413 4733 4692 6573 257 11 5 chr5 135675408 135677156 -63952994 + L1P LINE L1 1868 3627 -2519 3733 155 47 9 chr5 135677256 135677636 -63952514 - MER4D LTR ERV1 -98 805 390 2251 150 28 2 chr5 135677636 135678029 -63952121 - MER57A LTR ERV1 0 403 1 3733 155 47 9 chr5 135678029 135678282 -63951868 - MER4D LTR ERV1 -513 390 148 581 216 12 24 chr5 135678388 135678555 -63951595 - MER96B DNA MER1_type? -67 350 186 265 208 42 94 chr5 135678557 135678653 -63951497 + MER96B DNA MER1_type? 311 401 -16 213 108 0 0 chr5 135679106 135679143 -63951007 + (CA)n Simple_repeat Simple_repeat 1 37 0 273 128 0 0 chr5 135679265 135679312 -63950838 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 313 264 107 8 chr5 135679365 135679486 -63950664 + L1MC4a LINE L1 6171 6303 -1505 * 1060 219 61 4 chr5 135679481 135679760 -63950390 - L1 LINE L1 -2076 4070 3776 1598 219 14 19 chr5 135679884 135680244 -63949906 + MLT1A1 LTR MaLR 1 358 -7 525 296 20 50 chr5 135680357 135680556 -63949594 + L2 LINE L2 2897 3089 -224 357 62 0 0 chr5 135680888 135680936 -63949214 + (GA)n Simple_repeat Simple_repeat 1 48 0 1500 191 70 35 chr5 135681209 135681606 -63948544 + L1MA9 LINE L1 3255 3665 -2481 * 1856 176 6 3 chr5 135681588 135681917 -63948233 + L1MA9 LINE L1 5469 5798 -514 292 123 15 15 chr5 135681919 135681984 -63948166 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 2584 157 43 14 chr5 135681984 135682499 -63947651 + L1MA9 LINE L1 5783 6312 0 32 26 0 0 chr5 135682499 135682538 -63947612 + AT_rich Low_complexity Low_complexity 1 39 0 1099 139 0 0 chr5 135683087 135683245 -63946905 + AluSq SINE Alu 130 287 -26 228 238 50 25 chr5 135683285 135683365 -63946785 + L1MC4 LINE L1 6614 6695 -1347 736 321 0 0 chr5 135683372 135683586 -63946564 + (CATG)n Simple_repeat Simple_repeat 1 214 0 228 338 0 0 chr5 135683604 135683761 -63946389 + (TATG)n Simple_repeat Simple_repeat 2 158 0 422 291 0 53 chr5 135683774 135683963 -63946187 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 546 246 0 0 chr5 135683974 135684141 -63946009 + (TA)n Simple_repeat Simple_repeat 2 168 0 824 252 18 14 chr5 135684158 135684376 -63945774 + MER20 DNA MER1_type 1 219 0 530 334 51 62 chr5 135684617 135684750 -63945400 - L2 LINE L2 -825 2489 2356 2200 130 120 5 chr5 135684750 135685134 -63945016 + MSTA LTR MaLR 1 428 0 530 334 51 62 chr5 135685134 135685470 -63944680 - L2 LINE L2 -958 2356 2025 2809 42 0 0 chr5 135685473 135685807 -63944343 + L1PA4 LINE L1 5683 6016 -139 194 154 0 0 chr5 135685852 135685878 -63944272 + T-rich Low_complexity Low_complexity 1 26 0 591 231 3 142 chr5 135685989 135686305 -63943845 + MLT2B1 LTR ERVL 152 423 -97 449 204 0 164 chr5 135686281 135686501 -63943649 + MLT2B1 LTR ERVL 336 519 -1 * 391 326 98 68 chr5 135686510 135687044 -63943106 + L2 LINE L2 2757 3301 -12 338 239 138 9 chr5 135687102 135687211 -63942939 - MIR SINE MIR -75 187 65 247 156 0 0 chr5 135687670 135687715 -63942435 - L1PA15 LINE L1 -134 6031 5987 237 352 56 0 chr5 135687775 135687883 -63942267 - MIR SINE MIR 0 262 149 187 272 40 72 chr5 135687913 135688022 -63942128 + MIR SINE MIR 140 247 -15 1997 136 0 11 chr5 135688022 135688336 -63941814 - AluSx SINE Alu 0 311 1 187 272 40 72 chr5 135688336 135688350 -63941800 + MIR SINE MIR 247 260 -2 549 103 0 11 chr5 135688716 135688803 -63941347 - L1PA8 LINE L1 -1 6171 6086 1014 124 37 106 chr5 135688903 135689121 -63941029 - LTR23 LTR ERV1 -234 203 1 3954 204 31 37 chr5 135689194 135690011 -63940139 + MER21B LTR ERV1 3 814 -49 398 92 0 15 chr5 135690042 135690107 -63940043 + (TCTCC)n Simple_repeat Simple_repeat 5 68 0 197 323 108 46 chr5 135690917 135690996 -63939154 + L2 LINE L2 3105 3178 -135 2063 92 4 0 chr5 135690996 135691269 -63938881 - AluSx SINE Alu -14 298 25 197 323 108 46 chr5 135691269 135691384 -63938766 + L2 LINE L2 3178 3311 -2 522 225 0 8 chr5 135691977 135692097 -63938053 + L1MB4 LINE L1 5134 5252 -894 5366 129 22 10 chr5 135692099 135692988 -63937162 + L1PA5 LINE L1 5255 6154 0 2199 192 33 6 chr5 135692988 135693472 -63936678 + L1MB4 LINE L1 5490 5986 -194 507 288 83 15 chr5 135693619 135693824 -63936326 - MER20 DNA MER1_type 0 219 1 429 68 89 27 chr5 135693875 135694021 -63936129 + (TTATA)n Simple_repeat Simple_repeat 5 159 0 194 62 31 0 chr5 135695739 135695771 -63934379 + (TA)n Simple_repeat Simple_repeat 1 33 0 1891 132 0 27 chr5 135695801 135696096 -63934054 + AluSx SINE Alu 1 287 -25 600 123 0 0 chr5 135696212 135696326 -63933824 + (TG)n Simple_repeat Simple_repeat 2 115 0 22 35 0 0 chr5 135696525 135696554 -63933596 + AT_rich Low_complexity Low_complexity 1 29 0 1350 345 43 26 chr5 135697150 135698054 -63932096 - L1PA12 LINE L1 -5512 2069 1151 23 0 0 0 chr5 135698084 135698107 -63932043 + AT_rich Low_complexity Low_complexity 1 23 0 21 71 0 0 chr5 135699184 135699226 -63930924 + AT_rich Low_complexity Low_complexity 1 42 0 236 133 0 0 chr5 135699344 135699389 -63930761 + LTR66 LTR ERVL 395 439 -171 198 209 0 0 chr5 135699395 135699438 -63930712 + (CATA)n Simple_repeat Simple_repeat 2 44 0 2186 139 8 3 chr5 135699534 135699893 -63930257 - L1PB1 LINE L1 -8 6143 5783 1318 133 2 1 chr5 135699915 135700130 -63930020 - L1MC/D LINE L1 -361 5790 5600 349 87 16 43 chr5 135700128 135700196 -63929954 + L1MC/D LINE L1 5558 5620 -546 * 579 261 185 0 chr5 135700569 135700764 -63929386 - MIR SINE MIR -29 233 3 1033 335 162 35 chr5 135701626 135702811 -63927339 + L2 LINE L2 1933 3274 -39 374 264 106 85 chr5 135703748 135703873 -63926277 - MER113 DNA MER1_type? -179 342 221 4150 139 41 14 chr5 135703873 135704607 -63925543 - L1MB3 LINE L1 0 6183 5430 374 264 106 85 chr5 135704607 135704751 -63925399 - MER113 DNA MER1_type? -300 221 62 1417 215 52 9 chr5 135704751 135705077 -63925073 - MER58B DNA MER1_type 0 341 2 374 264 106 85 chr5 135705077 135705136 -63925014 - MER113 DNA MER1_type? -459 62 6 288 222 56 11 chr5 135705301 135705391 -63924759 + L1ME4a LINE L1 6028 6121 0 1715 308 95 38 chr5 135706325 135707487 -63922663 - L2 LINE L2 -75 3238 2004 284 159 0 0 chr5 135707704 135707748 -63922402 + L2 LINE L2 3265 3308 -5 263 278 96 26 chr5 135708272 135708387 -63921763 - MIR SINE MIR -33 229 107 261 411 54 0 chr5 135708495 135708624 -63921526 - L2 LINE L2 -20 3252 3117 1084 165 43 20 chr5 135708625 135708880 -63921270 - Charlie1 DNA MER1_type 0 2761 2501 3498 84 8 0 chr5 135709255 135709733 -63920417 - L1PA10 LINE L1 -5 6163 5682 214 338 8 23 chr5 135710850 135710983 -63919167 + T-rich Low_complexity Low_complexity 5 135 0 361 310 105 35 chr5 135711853 135712082 -63918068 - MLT1L LTR MaLR -7 608 364 23 0 0 0 chr5 135714057 135714080 -63916070 + AT_rich Low_complexity Low_complexity 1 23 0 203 322 64 58 chr5 135715191 135715362 -63914788 - L3 LINE CR1 -38 1539 1368 32 0 0 0 chr5 135716193 135716225 -63913925 + AT_rich Low_complexity Low_complexity 1 32 0 198 0 0 0 chr5 135716742 135716764 -63913386 + (CA)n Simple_repeat Simple_repeat 1 22 0 211 340 0 30 chr5 135716922 135717022 -63913128 + GA-rich Low_complexity Low_complexity 5 101 0 273 242 0 16 chr5 135717552 135717614 -63912536 + MER46C DNA MER2_type 276 336 -2 276 264 18 100 chr5 135717621 135717731 -63912419 + MIR SINE MIR 161 261 -1 192 263 88 25 chr5 135718147 135718227 -63911923 + MIR SINE MIR 178 262 0 2220 92 3 7 chr5 135718254 135718559 -63911591 - AluSx SINE Alu -8 304 1 344 335 185 0 chr5 135719712 135719912 -63910238 - MIR SINE MIR -10 252 16 5948 268 63 21 chr5 135720177 135720416 -63909734 + L1ME1 LINE L1 19 247 -5968 1313 134 60 0 chr5 135720416 135720632 -63909518 - MER30 DNA MER1_type -1 229 1 5948 268 63 21 chr5 135720632 135723092 -63907058 + L1ME1 LINE L1 247 2798 -3417 2764 242 114 15 chr5 135723132 135723188 -63906962 + L1ME1 LINE L1 3456 3505 -2710 1075 220 87 22 chr5 135723188 135723511 -63906639 - MER2 DNA MER2_type 0 344 1 2764 242 114 15 chr5 135723511 135724573 -63905577 + L1ME1 LINE L1 3505 4677 -1538 364 167 0 0 chr5 135724625 135724685 -63905465 + L1ME1 LINE L1 5459 5518 -793 1517 266 46 25 chr5 135724692 135725335 -63904815 + L1ME1 LINE L1 5596 6401 -2 2141 152 25 0 chr5 135725572 135725927 -63904223 - THE1B LTR MaLR 0 364 1 10198 101 50 16 chr5 135725927 135727455 -63902695 - THE1B-int LTR MaLR 0 1580 1 2058 133 64 9 chr5 135727455 135727800 -63902350 - THE1B LTR MaLR 0 364 1 26 0 0 0 chr5 135727997 135728023 -63902127 + AT_rich Low_complexity Low_complexity 1 26 0 684 245 95 24 chr5 135728189 135728483 -63901667 - HAL1b LINE L1 -691 657 343 462 229 21 21 chr5 135728608 135728752 -63901398 - HAL1b LINE L1 -862 486 343 317 303 92 27 chr5 135728770 135728955 -63901195 - HAL1b LINE L1 -1052 296 100 240 35 0 0 chr5 135729903 135729932 -63900218 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2468 67 0 6 chr5 135730045 135730358 -63899792 + AluY SINE Alu 1 311 0 297 0 0 0 chr5 135730527 135730560 -63899590 + (TTG)n Simple_repeat Simple_repeat 1 33 0 194 340 10 31 chr5 135731114 135731211 -63898939 - MER5B DNA MER1_type 0 178 84 669 265 5 43 chr5 135731221 135731406 -63898744 + MER5B DNA MER1_type 1 178 0 381 223 108 36 chr5 135733094 135733233 -63896917 - MER91B DNA MER1_type -8 182 34 3907 218 49 74 chr5 135733718 135735207 -63894943 - L1M4 LINE L1 -1626 5331 3880 5163 205 50 15 chr5 135735272 135736702 -63893448 - L1M4 LINE L1 -4842 2013 555 442 338 109 22 chr5 135736710 135736985 -63893165 + L2 LINE L2 2238 2536 -778 315 272 162 0 chr5 135737245 135737381 -63892769 + MIR SINE MIR 104 261 -1 221 256 72 104 chr5 135737671 135737796 -63892354 + L2 LINE L2 3145 3265 -7 2445 94 0 0 chr5 135737959 135738268 -63891882 - AluSq SINE Alu -4 309 1 266 271 17 0 chr5 135740030 135740089 -63890061 - L2 LINE L2 -3 3269 3210 21 0 0 0 chr5 135740106 135740127 -63890023 + AT_rich Low_complexity Low_complexity 1 21 0 244 211 0 0 chr5 135740619 135740676 -63889474 - L1ME4a LINE L1 -2 6119 6063 256 310 0 70 chr5 135740762 135740862 -63889288 - MIR SINE MIR -100 108 16 327 361 56 0 chr5 135740996 135741140 -63889010 + MIR SINE MIR 80 231 -31 5869 36 3 0 chr5 135741589 135742288 -63887862 + L1PA3 LINE L1 5455 6155 0 26 64 0 0 chr5 135743056 135743103 -63887047 + AT_rich Low_complexity Low_complexity 1 47 0 284 315 107 6 chr5 135743110 135743288 -63886862 - L2 LINE L2 0 3313 3118 998 232 58 84 chr5 135743379 135743793 -63886357 - MLT1I LTR MaLR 0 409 7 2412 65 22 6 chr5 135743840 135744164 -63885986 + L1PA6 LINE L1 5822 6150 -4 355 292 31 98 chr5 135745202 135745466 -63884684 - L1ME4a LINE L1 -238 5924 5688 1943 154 3 0 chr5 135745466 135745759 -63884391 + AluJo SINE Alu 1 294 -18 355 292 31 98 chr5 135745759 135745860 -63884290 - L1ME4a LINE L1 -474 5688 5582 545 239 22 83 chr5 135745925 135746155 -63883995 + MIR SINE MIR 16 231 -31 367 237 106 5 chr5 135746156 135746358 -63883792 - L1ME4a LINE L1 -849 5448 5254 2671 110 96 0 chr5 135747468 135747887 -63882263 - L1PA16 LINE L1 -9 6157 5699 437 233 47 31 chr5 135748270 135748399 -63881751 - LTR67 LTR ERVL 0 557 427 1064 102 0 85 chr5 135750040 135750241 -63879909 - AluSg/x SINE Alu 0 306 121 378 289 83 69 chr5 135750247 135750465 -63879685 - MIR SINE MIR -35 227 7 274 133 63 14 chr5 135750594 135750737 -63879413 + (TA)n Simple_repeat Simple_repeat 1 150 0 230 87 0 0 chr5 135750751 135750797 -63879353 + LTR66 LTR ERVL 394 439 -171 405 0 0 0 chr5 135750811 135750856 -63879294 + (GA)n Simple_repeat Simple_repeat 2 46 0 1249 254 0 0 chr5 135750862 135751134 -63879016 - AluJo SINE Alu -30 282 11 730 245 19 0 chr5 135751196 135751355 -63878795 + MIR SINE MIR 60 221 -41 180 250 0 0 chr5 135751367 135751415 -63878735 + (CATATA)n Simple_repeat Simple_repeat 3 50 0 316 240 40 10 chr5 135751882 135751982 -63878168 - MER103 DNA DNA -2 164 62 278 336 134 0 chr5 135752228 135752347 -63877803 + MIR3 SINE MIR 38 172 -36 459 352 20 15 chr5 135753024 135753220 -63876930 + MIR SINE MIR 15 211 -51 25 31 0 0 chr5 135753248 135753280 -63876870 + AT_rich Low_complexity Low_complexity 1 32 0 1025 166 26 16 chr5 135753507 135753700 -63876450 + MER3 DNA MER1_type 15 209 0 279 178 0 0 chr5 135753660 135753705 -63876445 - MER3 DNA MER1_type -122 87 43 * 407 299 101 49 chr5 135754132 135754497 -63875653 - L1M4 LINE L1 -3623 2523 2140 369 305 53 78 chr5 135754945 135755302 -63874848 - HAL1 LINE L1 -954 1553 1206 193 221 95 108 chr5 135757199 135757357 -63872793 + MIR SINE MIR 6 161 -101 413 354 60 13 chr5 135757467 135757781 -63872369 + L1MC/D LINE L1 5437 5765 -2043 2468 171 17 40 chr5 135757929 135757981 -63872169 - L1MB3 LINE L1 -2 6181 6129 2351 91 3 0 chr5 135757981 135758279 -63871871 - AluSp SINE Alu -14 299 1 2468 171 17 40 chr5 135758279 135758753 -63871397 - L1MB3 LINE L1 -54 6129 5667 207 0 0 0 chr5 135759126 135759149 -63871001 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr5 135759218 135759242 -63870908 + AT_rich Low_complexity Low_complexity 1 24 0 344 277 106 0 chr5 135759880 135759974 -63870176 - MER91C DNA MER1_type -32 108 5 446 340 5 23 chr5 135760065 135760280 -63869870 + L2 LINE L2 931 1141 -2173 910 330 96 22 chr5 135760318 135760943 -63869207 + L2 LINE L2 1702 2372 -942 1781 79 4 4 chr5 135761241 135761469 -63868681 - AluY SINE Alu -13 298 71 281 288 0 0 chr5 135761702 135761761 -63868389 + L2 LINE L2 3235 3293 -20 2672 203 62 51 chr5 135762134 135762843 -63867307 + L1MB7 LINE L1 5466 6182 -2 300 247 132 81 chr5 135763511 135763746 -63866404 + L3b LINE CR1 1224 1470 -113 378 241 214 0 chr5 135764826 135764971 -63865179 - MER5A DNA MER1_type -6 183 8 682 287 21 0 chr5 135765473 135765661 -63864489 - Charlie8 DNA MER1_type -2217 200 9 22 0 0 0 chr5 135766711 135766733 -63863417 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 135767647 135767668 -63862482 + AT_rich Low_complexity Low_complexity 1 21 0 611 259 40 20 chr5 135767718 135767919 -63862231 + L2 LINE L2 3109 3313 0 25663 136 11 25 chr5 135768794 135775279 -63854871 - L1PA8 LINE L1 -1 6486 6 30 0 0 0 chr5 135775745 135775775 -63854375 + AT_rich Low_complexity Low_complexity 1 30 0 533 309 116 15 chr5 135777292 135777551 -63852599 - L2 LINE L2 -630 2684 2400 876 214 5 36 chr5 135777863 135778059 -63852091 + L1PB4 LINE L1 5966 6155 -1 29 70 0 0 chr5 135778249 135778306 -63851844 + AT_rich Low_complexity Low_complexity 1 57 0 22 56 0 0 chr5 135778704 135778740 -63851410 + AT_rich Low_complexity Low_complexity 1 36 0 1977 103 4 7 chr5 135779089 135779362 -63850788 + AluSx SINE Alu 1 272 -40 195 42 0 0 chr5 135779383 135779407 -63850743 + (TAA)n Simple_repeat Simple_repeat 2 25 0 231 277 10 20 chr5 135779656 135779757 -63850393 + L1MC/D LINE L1 5812 5911 -1897 2668 254 52 21 chr5 135780087 135781302 -63848848 - L1MEc LINE L1 -2998 3428 2211 247 219 8 16 chr5 135781315 135781443 -63848707 + (TATAG)n Simple_repeat Simple_repeat 3 129 0 275 258 97 31 chr5 135781497 135781785 -63848365 - L1MEc LINE L1 -4380 2227 1816 2190 90 3 32 chr5 135782166 135782478 -63847672 + AluSp SINE Alu 1 303 -10 342 316 117 68 chr5 135782555 135782855 -63847295 + L1ME3A LINE L1 5531 5856 -314 6643 109 27 31 chr5 135782855 135783930 -63846220 - MER11C LTR ERVK 0 1071 1 342 316 117 68 chr5 135783930 135784024 -63846126 + L1ME3A LINE L1 5856 5944 -226 2855 19 0 0 chr5 135786411 135786728 -63843422 + AluYb8 SINE Alu 1 317 -1 21 0 0 0 chr5 135786944 135786965 -63843185 + AT_rich Low_complexity Low_complexity 1 21 0 386 204 144 30 chr5 135787245 135787377 -63842773 + L2 LINE L2 3165 3311 -2 245 109 22 0 chr5 135787999 135788045 -63842105 + (TG)n Simple_repeat Simple_repeat 2 48 0 31 0 0 0 chr5 135788814 135788845 -63841305 + AT_rich Low_complexity Low_complexity 1 31 0 809 316 20 4 chr5 135789154 135789407 -63840743 - MIR SINE MIR 0 262 6 2197 122 128 13 chr5 135790134 135790518 -63839632 + MSTA LTR MaLR 1 428 0 411 272 152 85 chr5 135790577 135791269 -63838881 + L1MC4a LINE L1 4647 5384 -762 667 308 75 32 chr5 135791298 135791765 -63838385 + L1MC4a LINE L1 5400 5886 -1922 195 42 0 0 chr5 135791797 135791821 -63838329 + (TG)n Simple_repeat Simple_repeat 2 25 0 237 286 48 0 chr5 135791903 135791987 -63838163 + L1MC4a LINE L1 6078 6165 -1643 1665 150 0 8 chr5 135792490 135792750 -63837400 + AluSx SINE Alu 1 258 -54 635 111 0 9 chr5 135792937 135793045 -63837105 + (TCTA)n Simple_repeat Simple_repeat 1 107 0 296 269 72 42 chr5 135793410 135793603 -63836547 - L1ME3A LINE L1 -286 5883 5685 195 42 0 0 chr5 135794092 135794116 -63836034 + (T)n Simple_repeat Simple_repeat 1 24 0 266 290 0 0 chr5 135796136 135796198 -63833952 + GA-rich Low_complexity Low_complexity 1 62 0 279 0 0 0 chr5 135796357 135796388 -63833762 + (TA)n Simple_repeat Simple_repeat 1 31 0 1970 157 35 22 chr5 135797645 135798015 -63832135 + THE1C LTR MaLR 1 375 0 1113 158 103 0 chr5 135798183 135798386 -63831764 - MER58A DNA MER1_type 0 224 1 21 82 0 0 chr5 135798501 135798550 -63831600 + AT_rich Low_complexity Low_complexity 1 49 0 3658 190 47 6 chr5 135798772 135799476 -63830674 + MER44D DNA MER2_type 1 605 0 2089 104 0 21 chr5 135799885 135800211 -63829939 - AluSx SINE Alu 0 330 11 2949 268 70 32 chr5 135801968 135802866 -63827284 - L2 LINE L2 -2 3311 2333 4552 145 26 23 chr5 135802866 135803645 -63826505 - LTR39 LTR ERV1 -2 781 1 2949 268 70 32 chr5 135803645 135803957 -63826193 - L2 LINE L2 -980 2333 2034 192 254 0 0 chr5 135805731 135805790 -63824360 + GA-rich Low_complexity Low_complexity 2 60 0 269 338 83 28 chr5 135806306 135806522 -63823628 + L2 LINE L2 1679 1906 -1408 404 332 164 33 chr5 135806561 135807186 -63822964 + L2 LINE L2 2212 2957 -356 2454 116 28 0 chr5 135807186 135807540 -63822610 + THE1B LTR MaLR 1 364 0 404 332 164 33 chr5 135807540 135807666 -63822484 + L2 LINE L2 2957 3065 -248 241 311 14 14 chr5 135807937 135808011 -63822139 + MER5A DNA MER1_type 105 178 -11 1804 223 93 17 chr5 135808519 135808981 -63821169 - MLT1D LTR MaLR -2 503 7 367 261 0 43 chr5 135810588 135810703 -63819447 + L1MB8 LINE L1 12 121 -6738 2282 87 3 13 chr5 135810788 135811087 -63819063 + AluSp SINE Alu 1 296 -17 2174 234 73 45 chr5 135811087 135811947 -63818203 + L1MB8 LINE L1 4593 5476 -1481 * 11482 174 42 22 chr5 135811941 135814456 -63815694 + L1MA4A LINE L1 2673 5238 -908 2258 102 7 0 chr5 135814461 135814756 -63815394 + AluSp SINE Alu 4 300 -13 5500 154 17 4 chr5 135814765 135815713 -63814437 + L1MA4A LINE L1 5339 6298 -5 4609 168 30 21 chr5 135815768 135816667 -63813483 + L1MB8 LINE L1 6077 6983 -6 490 315 189 33 chr5 135817315 135818153 -63811997 + L2 LINE L2 1932 2899 -415 207 0 0 0 chr5 135818188 135818211 -63811939 + (TTG)n Simple_repeat Simple_repeat 2 24 0 434 261 62 15 chr5 135818267 135818397 -63811753 + MLT1L LTR MaLR 147 282 -333 2641 171 109 70 chr5 135818959 135819754 -63810396 + LTR1B LTR ERV1 1 826 0 23 0 0 0 chr5 135819833 135819856 -63810294 + AT_rich Low_complexity Low_complexity 1 23 0 228 250 0 31 chr5 135823173 135823237 -63806913 + (TAG)n Simple_repeat Simple_repeat 2 63 0 194 289 19 0 chr5 135823304 135823356 -63806794 + MIR SINE MIR 78 130 -132 543 297 36 12 chr5 135823443 135823608 -63806542 - MIR SINE MIR -71 191 23 4025 172 28 8 chr5 135823928 135824643 -63805507 + MER44D DNA MER2_type 4 604 -1 1747 152 3 68 chr5 135825570 135825893 -63804257 - AluSx SINE Alu -10 302 1 238 232 0 0 chr5 135827362 135827418 -63802732 + MER5C DNA MER1_type 70 125 -199 2111 104 3 3 chr5 135828993 135829282 -63800868 - AluSc SINE Alu -20 289 1 21 0 0 0 chr5 135829285 135829306 -63800844 + AT_rich Low_complexity Low_complexity 1 21 0 2690 79 3 0 chr5 135829621 135829975 -63800175 - THE1A LTR MaLR 0 355 1 503 284 60 91 chr5 135830019 135830905 -63799245 - L1MEd LINE L1 -3248 2881 2062 21 36 0 0 chr5 135831048 135831076 -63799074 + AT_rich Low_complexity Low_complexity 1 28 0 783 295 66 60 chr5 135831179 135831737 -63798413 - L1MEd LINE L1 -4579 1731 1178 2179 117 73 9 chr5 135831737 135832079 -63798071 - THE1B LTR MaLR 0 364 1 783 295 66 60 chr5 135832079 135832797 -63797353 - L1MEd LINE L1 -5132 1178 420 194 303 34 22 chr5 135834298 135834387 -63795763 + L2 LINE L2 1913 2002 -1312 1237 284 165 30 chr5 135834389 135835160 -63794990 + L2 LINE L2 2186 3070 -243 1633 169 0 0 chr5 135835730 135835984 -63794166 + AluJb SINE Alu 34 287 -25 22 0 0 0 chr5 135836772 135836794 -63793356 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 135838493 135838514 -63791636 + AT_rich Low_complexity Low_complexity 1 21 0 4546 207 123 22 chr5 135839160 135839471 -63790679 - Charlie1a DNA MER1_type -1306 1455 1177 240 35 0 0 chr5 135839471 135839500 -63790650 + (TTTTG)n Simple_repeat Simple_repeat 4 32 0 4546 207 123 22 chr5 135839500 135840509 -63789641 - Charlie1a DNA MER1_type -1584 1177 1 2718 263 77 21 chr5 135840789 135841552 -63788598 + L1PA15 LINE L1 1 806 -5981 8771 236 61 16 chr5 135841583 135844047 -63786103 + L1PA15 LINE L1 1942 4506 -2291 5452 125 41 3 chr5 135844084 135845731 -63784419 + L1PA15 LINE L1 5127 6814 -2 596 218 19 13 chr5 135846295 135846451 -63783699 - L1MA10 LINE L1 -2 6332 6176 2601 226 82 14 chr5 135846465 135847615 -63782535 - L1ME1 LINE L1 -141 6094 4878 937 288 61 0 chr5 135847600 135847864 -63782286 - L1ME1 LINE L1 -6080 316 37 * 498 356 124 38 chr5 135847886 135848628 -63781522 - L2 LINE L2 -645 2669 1864 254 309 107 12 chr5 135848914 135848998 -63781152 + MER91C DNA MER1_type 24 115 -25 21 0 0 0 chr5 135849815 135849836 -63780314 + AT_rich Low_complexity Low_complexity 1 21 0 209 228 35 35 chr5 135853357 135853414 -63776736 - L2 LINE L2 -48 3265 3209 22 35 0 0 chr5 135854527 135854556 -63775594 + AT_rich Low_complexity Low_complexity 1 29 0 1878 149 6 16 chr5 135854714 135855029 -63775121 - AluJo SINE Alu 0 312 1 1604 177 77 13 chr5 135856215 135856593 -63773557 + L1MB7 LINE L1 5780 6181 -3 850 156 0 0 chr5 135857855 135857990 -63772160 + AluJb SINE Alu 1 135 -177 1925 172 0 0 chr5 135857990 135858293 -63771857 + AluJb SINE Alu 1 303 -9 256 243 243 0 chr5 135858660 135858734 -63771416 + MIR SINE MIR 171 262 0 2137 106 3 17 chr5 135858952 135859244 -63770906 + AluSx SINE Alu 4 291 -21 559 181 8 8 chr5 135859246 135859373 -63770777 + GA-rich Low_complexity Low_complexity 2 128 0 665 71 9 54 chr5 135859565 135859677 -63770473 + HY1 scRNA scRNA 5 111 -1 335 313 52 57 chr5 135860651 135860881 -63769269 + MIR SINE MIR 4 232 -30 205 309 237 0 chr5 135861261 135861358 -63768792 - L2 LINE L2 -6 3266 3147 1312 150 98 47 chr5 135861825 135862099 -63768051 + AluJo SINE Alu 1 288 -24 301 216 57 34 chr5 135862230 135862318 -63767832 + L1MCa LINE L1 1974 2063 -4363 245 133 0 0 chr5 135862319 135862364 -63767786 - LTR66 LTR ERVL -172 438 394 302 340 36 86 chr5 135862526 135862805 -63767345 - L2 LINE L2 -68 3204 2940 309 336 155 26 chr5 135863329 135863600 -63766550 + L1ME4a LINE L1 5313 5618 -2190 229 244 47 35 chr5 135863646 135863732 -63766418 + L1ME4a LINE L1 5708 5794 -327 686 265 25 20 chr5 135863811 135864011 -63766139 + MIR SINE MIR 62 262 0 24 96 0 0 chr5 135864449 135864522 -63765628 + AT_rich Low_complexity Low_complexity 1 73 0 260 176 0 14 chr5 135865057 135865131 -63765019 + (TA)n Simple_repeat Simple_repeat 1 73 0 867 224 6 0 chr5 135867073 135867252 -63762898 - MLT1B LTR MaLR -209 181 2 2051 116 7 3 chr5 135867283 135867584 -63762566 + AluSx SINE Alu 1 302 -10 1670 185 0 13 chr5 135868008 135868310 -63761840 + AluJo SINE Alu 1 298 -14 2299 291 98 21 chr5 135875531 135876727 -63753423 + L2 LINE L2 1901 3177 -136 882 226 71 29 chr5 135876896 135877135 -63753015 + MIR SINE MIR 10 258 -4 1972 137 17 7 chr5 135877587 135877880 -63752270 - AluJb SINE Alu -16 296 1 362 253 221 19 chr5 135877992 135878146 -63752004 + MER5A DNA MER1_type 5 189 0 260 271 90 8 chr5 135878414 135878536 -63751614 + L1ME4a LINE L1 5989 6120 -1 602 154 0 45 chr5 135878905 135879015 -63751135 + FLAM_C SINE Alu 1 105 -38 2494 83 0 0 chr5 135879204 135879506 -63750644 - AluSq SINE Alu -11 302 1 841 132 8 0 chr5 135879529 135879658 -63750492 - FLAM_C SINE Alu -1 142 13 2189 95 34 0 chr5 135880199 135880493 -63749657 - AluSx SINE Alu -8 304 1 24 0 0 0 chr5 135882457 135882481 -63747669 + AT_rich Low_complexity Low_complexity 1 24 0 2108 126 0 26 chr5 135882719 135883021 -63747129 + AluSx SINE Alu 1 294 -18 407 176 17 92 chr5 135883227 135883346 -63746804 - MER102b DNA MER1_type 0 341 232 1305 132 0 0 chr5 135883970 135884144 -63746006 - AluSq SINE Alu -134 179 6 229 152 0 0 chr5 135884148 135884204 -63745946 + Alu SINE Alu 257 312 0 273 340 39 0 chr5 135885077 135885180 -63744970 + L2 LINE L2 3163 3269 -3 2565 69 0 0 chr5 135885805 135886108 -63744042 + AluSq SINE Alu 1 303 -10 1493 193 36 26 chr5 135886527 135886712 -63743438 - AluJo SINE Alu -4 308 117 201 39 0 0 chr5 135886712 135886738 -63743412 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1493 193 36 26 chr5 135886738 135886857 -63743293 - AluJo SINE Alu -195 117 1 2343 95 3 0 chr5 135887779 135888074 -63742076 + AluSp SINE Alu 2 297 -16 964 252 16 28 chr5 135888972 135889368 -63740782 - LTR16A LTR ERVL -4 446 25 318 50 0 0 chr5 135889969 135890009 -63740141 + (GA)n Simple_repeat Simple_repeat 2 41 0 677 254 168 0 chr5 135890009 135890206 -63739944 - MIR SINE MIR -23 239 10 1319 151 158 26 chr5 135891194 135891466 -63738684 - AluJo SINE Alu 0 312 5 878 309 105 12 chr5 135893847 135894328 -63735822 - Charlie7 DNA MER1_type -1979 633 88 653 241 99 5 chr5 135894328 135894519 -63735631 - MER3 DNA MER1_type 0 209 1 878 309 105 12 chr5 135894519 135894616 -63735534 - Charlie7 DNA MER1_type -2524 88 1 198 143 0 0 chr5 135895667 135895702 -63734448 + (CA)n Simple_repeat Simple_repeat 2 36 0 359 281 0 43 chr5 135896519 135896683 -63733467 + CT-rich Low_complexity Low_complexity 2 158 0 333 0 0 0 chr5 135896929 135896966 -63733184 + (TG)n Simple_repeat Simple_repeat 1 37 0 288 91 0 0 chr5 135897094 135897138 -63733012 + (CA)n Simple_repeat Simple_repeat 2 45 0 22 70 0 0 chr5 135897240 135897283 -63732867 + AT_rich Low_complexity Low_complexity 1 43 0 478 352 93 31 chr5 135899122 135899606 -63730544 + L2 LINE L2 2601 3112 -160 443 271 104 35 chr5 135900497 135900641 -63729509 + MIR SINE MIR 5 158 -104 289 309 132 41 chr5 135901184 135901404 -63728746 + MIR SINE MIR 20 259 -3 2263 112 3 0 chr5 135902868 135903180 -63726970 + AluSp SINE Alu 1 313 0 204 158 0 0 chr5 135903330 135903368 -63726782 + (CA)n Simple_repeat Simple_repeat 1 38 0 20779 92 14 0 chr5 135905279 135905886 -63724264 + L1PA7 LINE L1 2234 2831 -3323 2278 105 0 10 chr5 135905886 135906200 -63723950 + AluY SINE Alu 1 311 0 20779 92 14 0 chr5 135906200 135909506 -63720644 + L1PA7 LINE L1 2831 6151 -3 434 221 201 66 chr5 135909523 135909812 -63720338 + HAL1b LINE L1 427 754 -594 423 284 124 15 chr5 135909860 135910061 -63720089 + HAL1b LINE L1 835 1057 -291 1544 201 10 0 chr5 135910293 135910582 -63719568 + AluJo SINE Alu 4 295 -17 185 138 0 75 chr5 135911263 135911343 -63718807 + (TTAA)n Simple_repeat Simple_repeat 1 74 0 308 145 0 16 chr5 135912174 135912236 -63717914 + (TA)n Simple_repeat Simple_repeat 2 62 0 471 267 13 40 chr5 135912793 135912943 -63717207 - MIR3 SINE MIR -38 170 25 356 200 38 67 chr5 135913484 135913589 -63716561 - L2 LINE L2 -49 3264 3163 377 282 145 0 chr5 135913846 135913970 -63716180 - MER5B DNA MER1_type -1 177 36 263 296 49 49 chr5 135913981 135914228 -63715922 + L1ME LINE L1 5336 5582 -580 5497 178 81 36 chr5 135914263 135915724 -63714426 + Looper DNA T2_type 32 1558 0 2041 106 29 0 chr5 135916189 135916493 -63713657 + AluSc SINE Alu 1 312 0 251 224 35 0 chr5 135916591 135916649 -63713501 + MER5B DNA MER1_type 118 177 -1 * 1369 271 41 96 chr5 135916649 135916929 -63713221 - L2 LINE L2 -514 2800 2506 1853 71 0 0 chr5 135916929 135917154 -63712996 - AluY SINE Alu -6 305 81 1369 271 41 96 chr5 135917154 135917558 -63712592 - L2 LINE L2 -808 2506 2154 21 0 0 0 chr5 135920371 135920392 -63709758 + AT_rich Low_complexity Low_complexity 1 21 0 342 0 0 0 chr5 135920392 135920430 -63709720 + (TA)n Simple_repeat Simple_repeat 2 39 0 26 82 0 0 chr5 135921079 135921140 -63709010 + AT_rich Low_complexity Low_complexity 1 61 0 267 298 48 24 chr5 135921847 135921931 -63708219 - L2 LINE L2 0 3313 3228 199 387 0 0 chr5 135922822 135922897 -63707253 - L2 LINE L2 -49 3264 3190 2388 81 0 7 chr5 135924162 135924458 -63705692 - AluSq SINE Alu -19 294 1 183 346 59 10 chr5 135928454 135928555 -63701595 - MIR SINE MIR 0 262 157 40695 32 24 1 chr5 135930944 135936947 -63693203 + L1PA3 LINE L1 1 6145 -10 21 0 0 0 chr5 135936947 135936968 -63693182 + AT_rich Low_complexity Low_complexity 1 21 0 2057 89 0 0 chr5 135937291 135937550 -63692600 - AluSx SINE Alu -19 293 35 187 347 173 0 chr5 135937742 135937817 -63692333 - L2 LINE L2 -45 3227 3140 447 266 26 0 chr5 135938259 135938372 -63691778 - L2 LINE L2 -9 3304 3189 32 43 0 0 chr5 135939702 135939748 -63690402 + AT_rich Low_complexity Low_complexity 1 46 0 214 225 43 43 chr5 135940959 135941097 -63689053 + (TTATA)n Simple_repeat Simple_repeat 5 142 0 2015 113 10 20 chr5 135941171 135941493 -63688657 - AluSx SINE Alu 0 312 1 658 263 74 47 chr5 135942506 135942992 -63687158 - L1ME LINE L1 -5290 780 282 23 0 0 0 chr5 135943914 135943937 -63686213 + AT_rich Low_complexity Low_complexity 1 23 0 371 306 27 41 chr5 135945027 135945174 -63684976 + MIR3 SINE MIR 19 163 -45 728 285 35 27 chr5 135946398 135946654 -63683496 + MIR SINE MIR 5 262 0 1094 300 194 56 chr5 135946669 135947785 -63682365 - L2 LINE L2 -609 2705 1436 347 352 51 6 chr5 135947788 135947964 -63682186 - L2 LINE L2 -2000 1314 1131 470 209 209 34 chr5 135948527 135948766 -63681384 + HAL1 LINE L1 1367 1647 -860 2213 74 3 14 chr5 135948805 135949110 -63681040 + AluY SINE Alu 2 303 0 22 0 0 0 chr5 135949128 135949150 -63681000 + AT_rich Low_complexity Low_complexity 1 22 0 303 312 187 21 chr5 135949523 135949860 -63680290 + L1M4 LINE L1 2110 2502 -3644 33 0 0 0 chr5 135951460 135951493 -63678657 + AT_rich Low_complexity Low_complexity 1 33 0 462 217 45 64 chr5 135952331 135952488 -63677662 - MIR SINE MIR -43 219 66 27 0 0 0 chr5 135953240 135953267 -63676883 + AT_rich Low_complexity Low_complexity 1 27 0 285 255 11 32 chr5 135953815 135953909 -63676241 - LTR33 LTR ERVL -8 513 422 415 231 15 31 chr5 135954107 135954237 -63675913 - LTR33 LTR ERVL -392 129 2 25 0 0 0 chr5 135954979 135955004 -63675146 + AT_rich Low_complexity Low_complexity 1 25 0 198 240 80 70 chr5 135955881 135955981 -63674169 - L3 LINE CR1 -1044 533 433 26 0 0 0 chr5 135956274 135956300 -63673850 + AT_rich Low_complexity Low_complexity 1 26 0 207 0 0 0 chr5 135958305 135958328 -63671822 + (TA)n Simple_repeat Simple_repeat 2 24 0 187 276 66 40 chr5 135958493 135958569 -63671581 + MIR SINE MIR 59 136 -126 13586 111 26 16 chr5 135960065 135960249 -63669901 - L1P LINE L1 -930 5216 5035 2251 101 0 7 chr5 135960249 135960547 -63669603 - AluSx SINE Alu -16 296 1 13586 111 26 16 chr5 135960547 135961317 -63668833 - L1P LINE L1 -1111 5035 4274 1829 130 49 0 chr5 135961317 135961472 -63668678 - AluSx SINE Alu -14 298 152 437 17 0 34 chr5 135961472 135961531 -63668619 + (TTA)n Simple_repeat Simple_repeat 2 58 0 1829 130 49 0 chr5 135961531 135961659 -63668491 - AluSx SINE Alu -160 152 1 13586 111 26 16 chr5 135961659 135962970 -63667180 - L1P LINE L1 -1872 4274 2928 6099 85 11 7 chr5 135962970 135963928 -63666222 + L1PA8A LINE L1 5153 6113 -18 60 27 0 0 chr5 135963929 135964003 -63666147 + AT_rich Low_complexity Low_complexity 1 74 0 861 208 24 9 chr5 135966597 135966809 -63663341 - L1MB7 LINE L1 -28 6156 5942 1678 163 3 27 chr5 135968444 135968738 -63661412 + AluJo SINE Alu 12 298 -14 661 241 74 56 chr5 135969591 135969807 -63660343 + MIR SINE MIR 13 232 -30 253 277 15 0 chr5 135969962 135970027 -63660123 + MIR SINE MIR 73 138 -70 23 33 0 0 chr5 135970606 135970636 -63659514 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr5 135971551 135971588 -63658562 + AT_rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr5 135971704 135971740 -63658410 + AT_rich Low_complexity Low_complexity 1 36 0 355 176 14 0 chr5 135974534 135974608 -63655542 + MER116 DNA Mariner 6 80 0 2052 156 8 20 chr5 135975186 135975576 -63654574 - MER101B LTR ERV1 0 570 186 315 188 0 0 chr5 135975597 135975661 -63654489 + MER31-int LTR ERV1 1743 1806 -3130 2835 161 26 30 chr5 135975671 135976236 -63653914 + MER101B LTR ERV1 8 570 0 445 324 174 9 chr5 135976276 135976495 -63653655 + MIR SINE MIR 2 256 -6 373 286 60 48 chr5 135976863 135976892 -63653258 - MIR3 SINE MIR -16 192 165 1984 148 3 3 chr5 135976892 135977190 -63652960 + AluSx SINE Alu 1 298 -14 373 286 60 48 chr5 135977190 135977328 -63652822 - MIR3 SINE MIR -43 165 23 193 388 44 19 chr5 135978935 135979095 -63651055 - L2 LINE L2 -223 3049 2886 1943 152 3 0 chr5 135979113 135979409 -63650741 + AluSx SINE Alu 2 298 -14 2638 98 78 39 chr5 135979719 135979945 -63650205 - MSTA LTR MaLR -1 427 176 1477 150 0 0 chr5 135979945 135980158 -63649992 - AluSg/x SINE Alu -12 300 88 2638 98 78 39 chr5 135980158 135980340 -63649810 - MSTA LTR MaLR -252 176 3 181 255 39 0 chr5 135980572 135980623 -63649527 + MIR SINE MIR 50 102 -160 2141 118 6 10 chr5 135981054 135981396 -63648754 + AluSp SINE Alu 1 341 0 2079 175 11 101 chr5 135983758 135983962 -63646188 + MLT1D LTR MaLR 1 222 -283 2510 57 7 0 chr5 135983962 135984262 -63645888 + AluY SINE Alu 1 302 -9 2079 175 11 101 chr5 135984262 135984383 -63645767 + MLT1D LTR MaLR 222 352 -153 1688 256 30 26 chr5 135984383 135984843 -63645307 - MLT1C LTR MaLR -3 464 3 2079 175 11 101 chr5 135984843 135985071 -63645079 + MLT1D LTR MaLR 352 505 0 1780 145 0 0 chr5 135985106 135985354 -63644796 + AluSq SINE Alu 1 248 -65 3670 193 38 30 chr5 135985369 135986551 -63643599 + L1ME2 LINE L1 4883 6154 -10 385 303 62 19 chr5 135986638 135986800 -63643350 - MLT1F1 LTR MaLR -398 169 1 193 262 164 0 chr5 135986927 135986988 -63643162 + MIR SINE MIR 64 134 -74 242 179 0 0 chr5 135986989 135987028 -63643122 + (CCCA)n Simple_repeat Simple_repeat 4 42 0 722 179 23 0 chr5 135987029 135987202 -63642948 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 2263 102 3 6 chr5 135987255 135987569 -63642581 - AluSq SINE Alu 0 313 1 31 58 0 0 chr5 135988110 135988162 -63641988 + AT_rich Low_complexity Low_complexity 1 52 0 234 203 38 25 chr5 135988171 135988250 -63641900 - L1ME4a LINE L1 -87 6034 5955 2098 134 0 0 chr5 135988274 135988599 -63641551 - AluJb SINE Alu 0 312 1 329 254 157 15 chr5 135988726 135988860 -63641290 + L2 LINE L2 2452 2604 -710 21 36 0 0 chr5 135989090 135989118 -63641032 + AT_rich Low_complexity Low_complexity 1 28 0 386 275 55 3 chr5 135989818 135989949 -63640201 + MLT1H LTR MaLR 427 587 -3 1695 273 91 13 chr5 135990239 135991042 -63639108 + L2 LINE L2 2438 3313 0 814 300 78 63 chr5 135991376 135991932 -63638218 - L2 LINE L2 -291 3022 2456 205 310 108 57 chr5 135993988 135994187 -63635963 + MIR SINE MIR 2 237 -25 1570 137 0 0 chr5 135994724 135994951 -63635199 - AluSg/x SINE Alu -8 302 76 1083 177 5 5 chr5 135995161 135995359 -63634791 + L1PB1 LINE L1 3 200 -6663 11468 187 55 16 chr5 135995359 136001132 -63629018 + L1PB1 LINE L1 634 6815 -52 2252 108 3 3 chr5 136001132 136001429 -63628721 + AluSg SINE Alu 1 297 -13 11468 187 55 16 chr5 136001429 136001485 -63628665 + L1PB1 LINE L1 6815 6867 0 22 0 0 0 chr5 136001485 136001507 -63628643 + AT_rich Low_complexity Low_complexity 1 22 0 1856 135 3 7 chr5 136003762 136004070 -63626080 + AluJb SINE Alu 1 307 0 2857 143 14 14 chr5 136004194 136004620 -63625530 - MSTC LTR MaLR -2 426 1 489 259 71 62 chr5 136006148 136006372 -63623778 + Charlie2 DNA MER1_type 97 322 -2460 850 194 77 59 chr5 136006428 136006584 -63623566 + Charlie2 DNA MER1_type 2249 2401 -461 1895 121 4 4 chr5 136006584 136006849 -63623301 + AluSq SINE Alu 29 293 -20 850 194 77 59 chr5 136006849 136007032 -63623118 + Charlie2 DNA MER1_type 2401 2594 -268 2088 164 12 9 chr5 136007056 136007398 -63622752 + LTR3b LTR ERVK 158 500 0 247 295 18 9 chr5 136007494 136007606 -63622544 + GA-rich Low_complexity Low_complexity 2 114 0 257 62 0 0 chr5 136007657 136007689 -63622461 + HERVK3 LTR ERVK 187 218 -7025 571 191 89 120 chr5 136007732 136007957 -63622193 + HERVK3 LTR ERVK 55 272 -6971 393 267 0 38 chr5 136008013 136008118 -63622032 + HERVK3 LTR ERVK 580 680 -6563 * 4593 187 42 31 chr5 136008106 136009160 -63620990 + HERVK3 LTR ERVK 1321 5292 -653 579 167 0 0 chr5 136009160 136009250 -63620900 + LTR3b LTR ERVK 411 500 0 3267 198 89 26 chr5 136009281 136010455 -63619695 - L1ME1 LINE L1 -20 6146 4902 830 201 26 53 chr5 136010455 136010479 -63619671 + Charlie2 DNA MER1_type 2605 2628 -234 1838 136 6 77 chr5 136010479 136010803 -63619347 + AluSx SINE Alu 1 301 -11 830 201 26 53 chr5 136010803 136011042 -63619108 + Charlie2 DNA MER1_type 2628 2861 -1 220 399 72 0 chr5 136011138 136011291 -63618859 - L2 LINE L2 -834 2480 2317 483 279 13 32 chr5 136011481 136011635 -63618515 + MIR SINE MIR 4 154 -108 745 245 64 16 chr5 136011801 136012050 -63618100 - LTR37B LTR ERV1 -5 463 203 233 200 62 31 chr5 136012120 136012185 -63617965 - LTR37B LTR ERV1 -395 73 7 244 234 47 0 chr5 136014010 136014074 -63616076 - MIR3 SINE MIR -30 178 112 724 319 90 16 chr5 136015097 136015680 -63614470 + MER115 DNA AcHobo 23 693 0 560 288 44 15 chr5 136016673 136016878 -63613272 + MIR SINE MIR 35 245 -17 291 290 41 7 chr5 136018896 136019041 -63611109 - L1M4 LINE L1 -3571 2575 2426 2114 148 94 7 chr5 136019057 136019463 -63610687 - L1MA9 LINE L1 -1 6311 5871 251 223 29 107 chr5 136022089 136022192 -63607958 + MLT1H LTR MaLR 454 548 -1 251 313 0 45 chr5 136022554 136022621 -63607529 + L2 LINE L2 3129 3192 -80 24 0 0 0 chr5 136022810 136022834 -63607316 + AT_rich Low_complexity Low_complexity 1 24 0 1539 141 74 39 chr5 136022885 136023168 -63606982 + AluJo SINE Alu 1 293 -19 4272 148 30 28 chr5 136024121 136024885 -63605265 - L1MC1 LINE L1 0 6333 5568 369 0 0 0 chr5 136025183 136025224 -63604926 + (CA)n Simple_repeat Simple_repeat 1 41 0 385 175 0 103 chr5 136025607 136025704 -63604446 - MLT1F LTR MaLR -435 107 21 365 282 62 70 chr5 136025831 136026104 -63604046 - L2 LINE L2 -87 3226 2956 463 282 79 27 chr5 136026807 136027025 -63603125 - MIR SINE MIR -27 235 3 1313 229 31 37 chr5 136027061 136027384 -63602766 + MER46C DNA MER2_type 1 321 -17 14706 63 8 10 chr5 136027753 136030902 -63599248 - L1PA7 LINE L1 -207 5947 2827 386 71 0 0 chr5 136030906 136030962 -63599188 - Alu SINE Alu 0 300 245 21 0 0 0 chr5 136031911 136031932 -63598218 + AT_rich Low_complexity Low_complexity 1 21 0 306 238 55 44 chr5 136032863 136033044 -63597106 - L1M4 LINE L1 -3727 2419 2237 376 198 36 0 chr5 136033071 136033332 -63596818 + (TA)n Simple_repeat Simple_repeat 1 270 0 1524 160 3 91 chr5 136033548 136033855 -63596295 - AluJo SINE Alu -30 282 3 857 149 0 0 chr5 136034554 136034675 -63595475 - FLAM_C SINE Alu -20 123 3 188 277 15 31 chr5 136034857 136034922 -63595228 - L2 LINE L2 -4 3309 3246 700 120 45 0 chr5 136035591 136035724 -63594426 - L1MA5 LINE L1 -3 6297 6159 1342 102 122 0 chr5 136036675 136036880 -63593270 - MER30 DNA MER1_type 0 230 1 1712 191 0 3 chr5 136036957 136037239 -63592911 + AluJo SINE Alu 2 282 -30 418 233 60 53 chr5 136037357 136037534 -63592616 + MIR SINE MIR 36 212 -50 2093 131 26 17 chr5 136037615 136037967 -63592183 + THE1A LTR MaLR 1 355 0 3329 213 30 15 chr5 136038036 136038855 -63591295 + L1MB8 LINE L1 4307 5138 -1008 3178 194 58 37 chr5 136038882 136039722 -63590428 + L1MB8 LINE L1 5319 6176 -2 1055 198 38 124 chr5 136039866 136040260 -63589890 - MLT1A2 LTR MaLR -11 363 4 1752 156 34 57 chr5 136040667 136041051 -63589099 - THE1C LTR MaLR 0 375 1 182 268 113 28 chr5 136041136 136041207 -63588943 - MIR3 SINE MIR -24 184 108 247 283 104 9 chr5 136041281 136041387 -63588763 + MIR SINE MIR 71 186 -76 511 238 194 53 chr5 136041555 136041874 -63588276 + MLT1A1 LTR MaLR 1 364 -1 270 296 121 45 chr5 136041903 136042102 -63588048 + MIR SINE MIR 20 233 -29 206 140 0 40 chr5 136042708 136042758 -63587392 + (GGGA)n Simple_repeat Simple_repeat 1 48 0 194 351 121 18 chr5 136043615 136043780 -63586370 - L2 LINE L2 -115 3157 2976 21 36 0 0 chr5 136043909 136043937 -63586213 + AT_rich Low_complexity Low_complexity 1 28 0 281 263 10 30 chr5 136044336 136044435 -63585715 - L2 LINE L2 -170 3102 3006 5310 151 26 17 chr5 136044437 136045175 -63584975 + MER54A LTR ERVL 1 750 -151 2311 113 33 28 chr5 136045175 136045537 -63584613 - THE1B LTR MaLR 0 364 1 5310 151 26 17 chr5 136045537 136045691 -63584459 + MER54A LTR ERVL 750 901 0 288 317 184 28 chr5 136045692 136046012 -63584138 - L2 LINE L2 -290 2982 2599 221 345 60 0 chr5 136046588 136046704 -63583446 - MIR SINE MIR -56 206 84 495 276 158 31 chr5 136047565 136047761 -63582389 - MIR SINE MIR -30 232 12 1330 181 114 47 chr5 136048187 136048574 -63581576 - Charlie1b DNA MER1_type -110 413 1 622 195 150 84 chr5 136048575 136048908 -63581242 + LTR37B LTR ERV1 114 468 0 1297 73 12 0 chr5 136049364 136049551 -63580599 + AluY SINE Alu 119 307 0 340 231 250 10 chr5 136050365 136050573 -63579577 + MIR SINE MIR 2 259 -3 1345 184 74 4 chr5 136050815 136051086 -63579064 - AluJo SINE Alu -22 290 1 344 172 0 0 chr5 136051714 136051772 -63578378 + MER5A DNA MER1_type 132 189 0 216 371 38 0 chr5 136053703 136053808 -63576342 + MIR SINE MIR 33 141 -67 23 0 0 0 chr5 136055176 136055199 -63574951 + AT_rich Low_complexity Low_complexity 1 23 0 2294 103 0 0 chr5 136055340 136055642 -63574508 + AluSc SINE Alu 1 302 -7 188 234 0 16 chr5 136055904 136055968 -63574182 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 22 35 0 0 chr5 136056587 136056616 -63573534 + AT_rich Low_complexity Low_complexity 1 29 0 180 111 0 0 chr5 136057443 136057470 -63572680 + (A)n Simple_repeat Simple_repeat 1 27 0 1607 145 45 58 chr5 136057603 136057867 -63572283 - MER7A DNA MER2_type -2692 346 87 660 163 0 89 chr5 136057867 136058002 -63572148 - FLAM_A SINE Alu -10 123 1 1607 145 45 58 chr5 136058002 136058047 -63572103 - MER7A DNA MER2_type -2951 87 43 22 0 0 0 chr5 136059268 136059290 -63570860 + AT_rich Low_complexity Low_complexity 1 22 0 1210 179 34 26 chr5 136059784 136060018 -63570132 + MER46A DNA MER2_type 1 236 0 355 251 17 91 chr5 136060036 136060211 -63569939 + L2 LINE L2 2614 2775 -539 266 196 130 11 chr5 136063303 136063395 -63566755 + L1MC4 LINE L1 6458 6560 -1482 2864 233 82 48 chr5 136063444 136063662 -63566488 + L1MC4 LINE L1 6704 6913 -1129 2504 74 0 3 chr5 136063662 136063974 -63566176 + AluY SINE Alu 1 311 0 2864 233 82 48 chr5 136063974 136064097 -63566053 + L1MC4 LINE L1 6913 7030 -1012 1821 188 74 27 chr5 136064097 136064502 -63565648 + MSTA LTR MaLR 5 428 0 2864 233 82 48 chr5 136064502 136065162 -63564988 + L1MC4 LINE L1 7030 7740 -302 22 35 0 0 chr5 136065204 136065233 -63564917 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 136066506 136066528 -63563622 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 136066865 136066890 -63563260 + AT_rich Low_complexity Low_complexity 1 25 0 278 268 0 0 chr5 136067370 136067452 -63562698 + (TA)n Simple_repeat Simple_repeat 2 83 0 261 335 98 26 chr5 136067563 136067757 -63562393 + MIR SINE MIR 28 235 -27 24 53 0 0 chr5 136069172 136069210 -63560940 + AT_rich Low_complexity Low_complexity 1 38 0 772 140 108 86 chr5 136069597 136069783 -63560367 + MER46A DNA MER2_type 47 236 0 430 299 90 33 chr5 136070188 136070399 -63559751 - MIR SINE MIR -29 233 11 1769 148 54 3 chr5 136070955 136071252 -63558898 - AluSx SINE Alu 0 312 1 1382 213 138 17 chr5 136071327 136071741 -63558409 + L1MD2 LINE L1 5895 6358 -1 209 204 0 0 chr5 136072267 136072316 -63557834 + A-rich Low_complexity Low_complexity 1 49 0 2219 104 0 0 chr5 136072814 136073103 -63557047 - AluSg SINE Alu -8 302 14 2468 139 152 26 chr5 136075029 136075497 -63554653 + MER1A DNA MER1_type 1 527 0 226 250 0 0 chr5 136075803 136075867 -63554283 + L1MC4 LINE L1 6640 6703 -1339 23 0 0 0 chr5 136076366 136076389 -63553761 + AT_rich Low_complexity Low_complexity 1 23 0 423 224 35 0 chr5 136076603 136076719 -63553431 - Charlie7 DNA MER1_type -495 2117 1998 867 154 6 63 chr5 136076719 136076894 -63553256 + MER2 DNA MER2_type 21 185 -160 21 36 0 0 chr5 136076896 136076924 -63553226 + AT_rich Low_complexity Low_complexity 1 28 0 352 239 42 0 chr5 136076936 136077007 -63553143 + MER2 DNA MER2_type 269 342 -3 270 153 208 0 chr5 136077016 136077088 -63553062 - Charlie7 DNA MER1_type -622 1990 1904 1653 179 159 5 chr5 136077096 136077436 -63552714 - L1MB4 LINE L1 -2 6178 5759 270 56 0 0 chr5 136077436 136077472 -63552678 + (CA)n Simple_repeat Simple_repeat 1 36 0 1653 179 159 5 chr5 136077472 136077551 -63552599 - L1MB4 LINE L1 -421 5759 5694 521 236 93 0 chr5 136077552 136077713 -63552437 - L1MB4 LINE L1 -1007 5139 4964 686 265 157 25 chr5 136077840 136078247 -63551903 - Charlie7 DNA MER1_type -778 1834 1374 347 192 13 13 chr5 136078516 136078594 -63551556 - Charlie7 DNA MER1_type -1570 1042 965 1879 164 20 0 chr5 136078789 136079088 -63551062 + AluJb SINE Alu 1 305 -7 833 200 56 6 chr5 136079666 136079846 -63550304 + MER5A DNA MER1_type 1 189 0 398 292 103 76 chr5 136080188 136080386 -63549764 - L1ME3 LINE L1 -248 5914 5723 2178 125 0 0 chr5 136080386 136080683 -63549467 - AluSx SINE Alu -15 297 1 398 292 103 76 chr5 136080683 136080871 -63549279 - L1ME3 LINE L1 -439 5723 5510 1460 102 65 0 chr5 136080871 136081087 -63549063 + MER30 DNA MER1_type 1 230 0 398 292 103 76 chr5 136081087 136081185 -63548965 - L1ME3 LINE L1 -652 5510 5416 427 291 153 21 chr5 136081398 136081776 -63548374 - L1ME3 LINE L1 -1058 5088 4661 237 162 0 0 chr5 136081944 136081981 -63548169 - tRNA-Lys-AAG tRNA tRNA -38 38 2 32 0 0 0 chr5 136082273 136082305 -63547845 + AT_rich Low_complexity Low_complexity 1 32 0 291 104 0 0 chr5 136083045 136083093 -63547057 + (CA)n Simple_repeat Simple_repeat 2 49 0 6686 59 51 0 chr5 136083544 136084711 -63545439 - L1PA7 LINE L1 -18 6136 4948 4951 102 3 11 chr5 136085010 136085732 -63544418 + L1PA15 LINE L1 5447 6162 -3 445 266 140 59 chr5 136086980 136087352 -63542798 + MLT1J LTR MaLR 102 503 -8 1354 314 106 18 chr5 136087502 136088207 -63541943 + HAL1 LINE L1 33 799 -1708 594 215 82 32 chr5 136088316 136088535 -63541615 + HAL1 LINE L1 1973 2202 -305 3534 188 44 16 chr5 136088622 136089311 -63540839 + MER44D DNA MER2_type 1 604 -1 1445 159 48 58 chr5 136089497 136089792 -63540358 - AluJo SINE Alu -16 296 5 183 42 0 0 chr5 136089845 136089869 -63540281 + (T)n Simple_repeat Simple_repeat 1 24 0 2299 94 0 0 chr5 136090354 136090653 -63539497 - AluSx SINE Alu -13 299 1 21 0 0 0 chr5 136092202 136092223 -63537927 + AT_rich Low_complexity Low_complexity 1 21 0 25 65 0 0 chr5 136093276 136093322 -63536828 + AT_rich Low_complexity Low_complexity 1 46 0 26 0 0 0 chr5 136093425 136093451 -63536699 + AT_rich Low_complexity Low_complexity 1 26 0 570 273 190 23 chr5 136094215 136094651 -63535499 - L1ME2 LINE L1 -202 5962 5454 21 36 0 0 chr5 136095800 136095828 -63534322 + AT_rich Low_complexity Low_complexity 1 28 0 194 152 0 22 chr5 136096049 136096095 -63534055 + (TA)n Simple_repeat Simple_repeat 1 45 0 364 227 10 21 chr5 136096502 136096599 -63533551 - L1MC5 LINE L1 -44 7917 7822 1005 241 97 50 chr5 136096609 136097112 -63533038 - L1MC5 LINE L1 -184 7777 7251 566 226 72 39 chr5 136097130 136097338 -63532812 + L1MC5 LINE L1 7675 7889 -72 752 256 123 42 chr5 136097424 136097878 -63532272 + L1MC4 LINE L1 7506 7996 -46 61 0 0 0 chr5 136100030 136100091 -63530059 + AT_rich Low_complexity Low_complexity 1 61 0 1212 198 39 109 chr5 136100773 136100997 -63529153 + L1M4 LINE L1 4399 4572 -1574 569 152 0 0 chr5 136100997 136101096 -63529054 + L1PB3 LINE L1 6054 6152 -2 1212 198 39 109 chr5 136101096 136101357 -63528793 + L1M4 LINE L1 4572 4850 -1296 1941 143 0 13 chr5 136101569 136101877 -63528273 + AluSx SINE Alu 1 304 -8 22 35 0 0 chr5 136102196 136102225 -63527925 + AT_rich Low_complexity Low_complexity 1 29 0 380 229 38 70 chr5 136102665 136102822 -63527328 + L1MC5 LINE L1 7749 7900 -61 2292 106 0 0 chr5 136103677 136103988 -63526162 + AluSx SINE Alu 1 311 -1 217 315 27 27 chr5 136104412 136104485 -63525665 + MIR3 SINE MIR 111 183 -25 21 57 0 0 chr5 136104813 136104848 -63525302 + AT_rich Low_complexity Low_complexity 1 35 0 1681 196 0 3 chr5 136105742 136106048 -63524102 + AluJb SINE Alu 6 310 -2 435 352 91 84 chr5 136106285 136106944 -63523206 - L2 LINE L2 0 3272 2597 376 301 160 38 chr5 136106981 136107350 -63522800 - L2 LINE L2 -923 2391 1978 1005 251 67 12 chr5 136107441 136107771 -63522379 + L1MC4 LINE L1 7219 7566 -476 459 214 55 55 chr5 136108313 136108458 -63521692 + L2 LINE L2 3168 3312 -1 446 339 55 29 chr5 136111483 136111831 -63518319 + L2 LINE L2 2374 2730 -584 2140 113 3 0 chr5 136111951 136112253 -63517897 - AluSp SINE Alu -10 303 1 1782 93 0 45 chr5 136112257 136112525 -63517625 - AluY SINE Alu -14 297 42 482 56 0 0 chr5 136112525 136112596 -63517554 - Alu SINE Alu -239 71 1 346 287 133 7 chr5 136112601 136112751 -63517399 + L2 LINE L2 3143 3311 -2 1944 147 6 10 chr5 136113269 136113442 -63516708 - AluSx SINE Alu -1 311 138 1849 111 59 4 chr5 136113442 136113712 -63516438 - AluSc SINE Alu -8 301 17 1944 147 6 10 chr5 136113712 136113850 -63516300 - AluSx SINE Alu -174 138 1 189 291 68 10 chr5 136114708 136114811 -63515339 - MIR SINE MIR -44 218 110 488 258 18 17 chr5 136115277 136115401 -63514749 - MIR SINE MIR -62 146 38 22 0 0 0 chr5 136115482 136115504 -63514646 + AT_rich Low_complexity Low_complexity 1 22 0 3262 251 130 52 chr5 136115768 136116557 -63513593 + L1M4 LINE L1 2735 3461 -2702 2498 66 0 0 chr5 136116557 136116862 -63513288 + AluY SINE Alu 1 305 -6 3262 251 130 52 chr5 136116862 136117014 -63513136 + L1M4 LINE L1 3461 3600 -2563 240 35 0 0 chr5 136117014 136117043 -63513107 + (TA)n Simple_repeat Simple_repeat 2 30 0 3262 251 130 52 chr5 136117043 136118589 -63511561 + L1M4 LINE L1 3600 5420 -743 2370 211 66 100 chr5 136118944 136119766 -63510384 + MER21B LTR ERV1 12 805 -58 1528 250 65 21 chr5 136119856 136120368 -63509782 + L1ME LINE L1 4797 5330 -816 629 208 69 35 chr5 136120375 136120548 -63509602 + L1ME LINE L1 5375 5553 -613 2409 74 0 13 chr5 136122359 136122669 -63507481 + AluY SINE Alu 1 306 -5 260 315 54 39 chr5 136122967 136123097 -63507053 + LTR16C LTR ERVL 328 459 -32 2242 81 3 16 chr5 136123226 136123536 -63506614 + AluY SINE Alu 1 306 -5 7655 28 5 0 chr5 136123976 136125167 -63504983 - L1PA3 LINE L1 -1 6154 4962 2151 42 0 0 chr5 136125167 136125430 -63504720 + L1PA3 LINE L1 4695 4957 -1189 458 237 107 27 chr5 136125847 136126071 -63504079 - L1MC5 LINE L1 -444 7517 7276 5723 103 35 10 chr5 136126117 136127270 -63502880 - L1PB2 LINE L1 -5 6146 4995 864 240 113 94 chr5 136127271 136127822 -63502328 - L1MC5 LINE L1 -784 7177 6617 264 30 0 0 chr5 136128429 136128462 -63501688 + (TA)n Simple_repeat Simple_repeat 2 34 0 2055 128 7 0 chr5 136129423 136129711 -63500439 + AluSx SINE Alu 1 290 -22 264 239 0 0 chr5 136133005 136133066 -63497084 + (CATATA)n Simple_repeat Simple_repeat 1 64 -7 2526 60 0 0 chr5 136133066 136133364 -63496786 - AluY SINE Alu -13 298 1 264 239 0 0 chr5 136133364 136133373 -63496777 + (CATATA)n Simple_repeat Simple_repeat 63 71 0 25 0 0 0 chr5 136135694 136135719 -63494431 + AT_rich Low_complexity Low_complexity 1 25 0 2711 131 68 21 chr5 136136041 136136569 -63493581 - L1MB8 LINE L1 -9 6169 5617 5659 72 17 3 chr5 136136780 136137542 -63492608 + L1PA7 LINE L1 5369 6141 -13 547 321 46 18 chr5 136139273 136139668 -63490482 + L2 LINE L2 1831 2324 -990 276 102 0 0 chr5 136140150 136140199 -63489951 + (TA)n Simple_repeat Simple_repeat 2 50 0 2209 94 7 7 chr5 136140199 136140496 -63489654 - AluSx SINE Alu -13 299 3 314 263 153 17 chr5 136141077 136141195 -63488955 + L2 LINE L2 2926 3059 -254 553 268 98 6 chr5 136141422 136141605 -63488545 + MIR SINE MIR 1 200 -62 861 254 47 85 chr5 136141620 136141930 -63488220 + L1ME3A LINE L1 5518 5807 -363 1974 133 6 29 chr5 136141930 136142245 -63487905 + AluJb SINE Alu 5 312 0 861 254 47 85 chr5 136142245 136142383 -63487767 + L1ME3A LINE L1 5807 5949 -221 478 273 104 0 chr5 136142465 136142619 -63487531 + L1ME3A LINE L1 5965 6134 -36 291 207 24 49 chr5 136142650 136142732 -63487418 + MIR SINE MIR 183 262 0 1191 133 77 10 chr5 136144294 136144490 -63485660 - MER46A DNA MER2_type -2 234 26 319 268 21 21 chr5 136144508 136144605 -63485545 - MIR SINE MIR -116 146 50 5749 144 95 18 chr5 136144610 136145746 -63484404 + Tigger3b DNA MER2_type 8 1231 0 300 357 79 38 chr5 136145759 136146025 -63484125 + L1ME LINE L1 564 840 -5690 430 199 29 123 chr5 136146275 136146654 -63483496 + L1ME LINE L1 944 1410 -5120 * 1043 237 110 6 chr5 136146650 136147005 -63483145 + L1ME LINE L1 1654 2045 -4676 271 256 111 0 chr5 136147209 136147408 -63482742 + L1ME LINE L1 2339 2559 -3981 1242 137 87 36 chr5 136149055 136149274 -63480876 + MER30 DNA MER1_type 1 230 0 718 228 43 11 chr5 136149864 136150048 -63480102 + MER3 DNA MER1_type 1 190 -19 197 380 66 50 chr5 136150352 136150473 -63479677 + MIR SINE MIR 24 146 -62 305 245 78 20 chr5 136150571 136150673 -63479477 - L2 LINE L2 -6 3307 3200 551 79 0 0 chr5 136151071 136151147 -63479003 + MADE1 DNA Mariner 5 80 0 713 317 178 27 chr5 136151175 136151689 -63478461 - L2 LINE L2 -778 2536 1878 249 33 0 0 chr5 136151689 136151719 -63478431 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 713 317 178 27 chr5 136151719 136151933 -63478217 - L2 LINE L2 -1436 1878 1698 878 172 125 56 chr5 136152059 136152362 -63477788 + MER33 DNA MER1_type 1 324 0 379 311 201 5 chr5 136152542 136152751 -63477399 - L2 LINE L2 -689 2625 2376 1866 245 170 11 chr5 136153527 136154360 -63475790 + L2 LINE L2 2354 3307 -6 945 184 18 0 chr5 136155441 136155604 -63474546 - FAM SINE Alu -7 168 3 2394 94 3 0 chr5 136155653 136155961 -63474189 - AluSq SINE Alu -4 309 1 491 278 264 40 chr5 136156523 136156803 -63473347 + L2 LINE L2 1955 2171 -1143 300 27 0 0 chr5 136156803 136156840 -63473310 + (CA)n Simple_repeat Simple_repeat 2 38 0 491 278 264 40 chr5 136156840 136157229 -63472921 + L2 LINE L2 2171 2774 -540 270 344 100 17 chr5 136157238 136157418 -63472732 + L2 LINE L2 2887 3081 -191 480 281 119 99 chr5 136160309 136160573 -63469577 + L1M2 LINE L1 548 805 -6044 294 29 0 0 chr5 136160573 136160608 -63469542 + (CCG)n Simple_repeat Simple_repeat 3 37 0 480 281 119 99 chr5 136160608 136161474 -63468676 + L1M2 LINE L1 805 1444 -5405 2427 57 0 10 chr5 136162468 136162769 -63467381 - AluY SINE Alu -13 298 1 937 284 140 27 chr5 136163178 136163676 -63466474 - L2 LINE L2 0 3313 2771 1240 234 84 14 chr5 136163688 136164047 -63466103 - MLT1B LTR MaLR 0 390 7 1009 224 164 32 chr5 136164052 136164423 -63465727 - L2 LINE L2 -554 2760 2341 202 316 200 44 chr5 136164561 136164842 -63465308 - L2 LINE L2 -239 3033 2669 1673 139 32 42 chr5 136164842 136165152 -63464998 + AluJo SINE Alu 1 307 -5 202 316 200 44 chr5 136165152 136165247 -63464903 - L2 LINE L2 -603 2669 2590 354 342 44 0 chr5 136165248 136165406 -63464744 - MIR SINE MIR 0 262 98 2058 144 0 0 chr5 136166226 136166531 -63463619 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr5 136166647 136166668 -63463482 + AT_rich Low_complexity Low_complexity 1 21 0 893 235 40 45 chr5 136167035 136167190 -63462960 + MIR SINE MIR 6 161 -101 1784 143 35 21 chr5 136167190 136167476 -63462674 - AluJb SINE Alu -18 294 5 893 235 40 45 chr5 136167476 136167567 -63462583 + MIR SINE MIR 161 251 -11 710 132 9 9 chr5 136167913 136168027 -63462123 + FLAM_A SINE Alu 12 125 -17 242 314 118 0 chr5 136168644 136168746 -63461404 - L3b LINE CR1 -353 1230 1117 2254 97 7 13 chr5 136168982 136169291 -63460859 - AluSq SINE Alu -4 309 3 32 91 0 0 chr5 136169317 136169405 -63460745 + AT_rich Low_complexity Low_complexity 1 88 0 22 80 0 0 chr5 136169458 136169508 -63460642 + AT_rich Low_complexity Low_complexity 1 50 0 952 308 53 19 chr5 136169634 136170147 -63460003 - L1ME4a LINE L1 -260 5861 5332 427 339 57 12 chr5 136170492 136170737 -63459413 + LTR16A LTR ERVL 158 413 -37 260 182 36 36 chr5 136170929 136170984 -63459166 + LTR67 LTR ERVL 503 557 0 3427 115 51 10 chr5 136171179 136171685 -63458465 + MER1A DNA MER1_type 1 527 0 1927 154 39 21 chr5 136172506 136172838 -63457312 - THE1B LTR MaLR 0 364 27 1795 151 0 27 chr5 136172854 136173146 -63457004 + AluJb SINE Alu 11 294 -18 2415 94 0 0 chr5 136173146 136173453 -63456697 + AluSc SINE Alu 1 307 -2 751 258 8 52 chr5 136173873 136174140 -63456010 - L1ME LINE L1 -362 5808 5554 902 278 135 0 chr5 136174685 136175121 -63455029 - L1MC/D LINE L1 -2000 5808 5314 189 0 0 0 chr5 136176689 136176710 -63453440 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1842 134 8 0 chr5 136176720 136176981 -63453169 - AluSx SINE Alu -27 285 23 1806 232 26 24 chr5 136177383 136177844 -63452306 + LTR40b LTR ERVL 1 462 0 558 236 195 0 chr5 136177863 136178037 -63452113 - MER58C DNA MER1_type -6 209 2 350 214 24 0 chr5 136178302 136178428 -63451722 + L1MDa LINE L1 2452 2580 -3960 860 205 23 33 chr5 136178475 136178635 -63451515 - MSTD LTR MaLR -183 213 54 3170 155 84 43 chr5 136178635 136179333 -63450817 - LTR8A LTR ERV1 0 727 1 860 205 23 33 chr5 136179333 136179387 -63450763 - MSTD LTR MaLR -342 54 1 314 331 79 0 chr5 136179387 136179514 -63450636 + L1MDa LINE L1 2747 2883 -3657 595 247 6 28 chr5 136179692 136179874 -63450276 + MER5B DNA MER1_type 1 178 0 2362 83 0 3 chr5 136180574 136180875 -63449275 - AluY SINE Alu -8 303 4 1645 148 81 7 chr5 136180878 136181149 -63449001 - AluJo SINE Alu -21 291 1 569 237 124 24 chr5 136181197 136181366 -63448784 + MIR SINE MIR 6 191 -71 1632 191 58 9 chr5 136181543 136181978 -63448172 + MER89 LTR ERV1 1 557 -2 1876 124 52 0 chr5 136182904 136183204 -63446946 - AluSx SINE Alu 0 314 1 272 280 103 0 chr5 136183207 136183314 -63446836 + MIR SINE MIR 47 164 -98 282 167 48 83 chr5 136183328 136183412 -63446738 - MER34 LTR ERV1 0 542 462 212 234 16 62 chr5 136183660 136183724 -63446426 - MER5A DNA MER1_type -57 132 72 1394 194 75 17 chr5 136184509 136184854 -63445296 + MLT1A1 LTR MaLR 1 365 0 34 0 0 0 chr5 136185439 136185473 -63444677 + AT_rich Low_complexity Low_complexity 1 34 0 215 279 81 0 chr5 136186566 136186652 -63443498 + L2 LINE L2 2352 2444 -870 482 309 75 27 chr5 136189588 136189921 -63440229 - LTR33 LTR ERVL 0 521 173 443 281 43 24 chr5 136190061 136190225 -63439925 + MIR SINE MIR 2 168 -94 1658 100 0 0 chr5 136190244 136190464 -63439686 + AluSq SINE Alu 1 220 -93 451 103 0 0 chr5 136190628 136190686 -63439464 - AluJ/FLAM SINE Alu -249 63 6 2505 136 18 18 chr5 136190710 136191160 -63438990 + L1M3 LINE L1 5320 5769 -414 2244 113 0 0 chr5 136191160 136191461 -63438689 + AluSg SINE Alu 1 301 -9 837 179 19 12 chr5 136191470 136191632 -63438518 + FRAM SINE Alu 2 164 -2 238 308 0 0 chr5 136191634 136191699 -63438451 + MIR SINE MIR 177 241 -21 23 0 0 0 chr5 136193318 136193341 -63436809 + GC_rich Low_complexity Low_complexity 1 23 0 883 114 8 0 chr5 136193489 136193612 -63436538 + AluSg/x SINE Alu 175 298 -12 520 309 91 9 chr5 136193622 136193842 -63436308 - MIR SINE MIR -24 238 1 327 280 27 60 chr5 136194060 136194210 -63435940 + MIR SINE MIR 118 262 0 426 249 141 32 chr5 136194839 136195024 -63435126 - MIR SINE MIR -12 250 46 1267 221 57 83 chr5 136195354 136195811 -63434339 - MLT1F LTR MaLR -93 449 5 26 30 0 0 chr5 136195915 136195948 -63434202 + AT_rich Low_complexity Low_complexity 1 33 0 667 247 44 12 chr5 136197868 136198119 -63432031 + MIR SINE MIR 4 262 0 21 0 0 0 chr5 136198123 136198144 -63432006 + AT_rich Low_complexity Low_complexity 1 21 0 211 307 99 0 chr5 136198267 136198368 -63431782 - MIR SINE MIR -118 144 34 353 251 92 75 chr5 136198641 136198880 -63431270 - MLT1K LTR MaLR -29 559 317 205 182 23 0 chr5 136199621 136199665 -63430485 + L2 LINE L2 3268 3312 -1 336 24 0 0 chr5 136201612 136201653 -63428497 + (TG)n Simple_repeat Simple_repeat 2 42 0 222 316 38 13 chr5 136202575 136202654 -63427496 - L2 LINE L2 -6 3307 3227 328 21 21 0 chr5 136202761 136202808 -63427342 - L1PA7 LINE L1 -2734 3412 3365 13862 86 17 1 chr5 136202808 136205514 -63424636 + L1PA7 LINE L1 3441 6154 0 216 0 0 0 chr5 136206365 136206389 -63423761 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 397 222 183 13 chr5 136206719 136206872 -63423278 + MIR SINE MIR 75 253 -9 247 272 19 19 chr5 136207960 136208063 -63422087 - L1MC/D LINE L1 -2058 5750 5648 1944 163 0 0 chr5 136208066 136208367 -63421783 + AluSx SINE Alu 5 305 -7 33 43 0 0 chr5 136208491 136208538 -63421612 + AT_rich Low_complexity Low_complexity 1 47 0 235 255 39 0 chr5 136208611 136208713 -63421437 - L1MC/D LINE L1 -2411 5397 5292 27 29 0 0 chr5 136208746 136208780 -63421370 + AT_rich Low_complexity Low_complexity 1 34 0 638 320 121 57 chr5 136208906 136209431 -63420719 + L2 LINE L2 2500 3050 -263 244 286 13 0 chr5 136209543 136209620 -63420530 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 456 51 0 0 chr5 136209622 136209681 -63420469 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 403 172 121 0 chr5 136209792 136209891 -63420259 + MER94 DNA DNA 1 111 -23 303 304 67 71 chr5 136209907 136210312 -63419838 - L1MC/D LINE L1 -1369 4777 4373 1788 164 3 26 chr5 136210312 136210617 -63419533 - AluJb SINE Alu -12 300 3 303 304 67 71 chr5 136210617 136210661 -63419489 - L1MC/D LINE L1 -1773 4373 4330 864 245 163 31 chr5 136210767 136211250 -63418900 + MLT1G LTR MaLR 2 517 -73 286 286 26 65 chr5 136211328 136211482 -63418668 + MIR SINE MIR 65 212 -50 193 200 60 0 chr5 136212417 136212467 -63417683 + MIR SINE MIR 138 190 -72 292 256 37 12 chr5 136215114 136215196 -63414954 - MIR SINE MIR -65 197 114 458 233 87 0 chr5 136215216 136215319 -63414831 + L2 LINE L2 3196 3307 -6 528 241 43 28 chr5 136215665 136215806 -63414344 + MIR SINE MIR 105 247 -15 467 221 8 0 chr5 136216544 136216671 -63413479 + GA-rich Low_complexity Low_complexity 3 130 0 2498 104 2 48 chr5 136217472 136217867 -63412283 + MER51B LTR ERV1 1 377 0 1140 160 5 0 chr5 136218067 136218273 -63411877 - L1MA6 LINE L1 -249 6051 5845 1312 161 11 11 chr5 136218285 136218559 -63411591 + L1MA6 LINE L1 6026 6299 -1 239 348 54 18 chr5 136218870 136218982 -63411168 - L2 LINE L2 -1 3271 3156 21 0 0 0 chr5 136219293 136219314 -63410836 + AT_rich Low_complexity Low_complexity 1 21 0 2152 76 20 30 chr5 136219322 136219623 -63410527 + AluSx SINE Alu 1 298 -14 2672 223 40 59 chr5 136219625 136220282 -63409868 - L1ME2 LINE L1 -12 6152 5484 4250 132 29 23 chr5 136220282 136221035 -63409115 - L1MA7 LINE L1 0 6291 5534 2672 223 40 59 chr5 136221035 136221221 -63408929 - L1ME2 LINE L1 -680 5484 5321 1408 176 56 23 chr5 136221221 136221523 -63408627 + AluJo SINE Alu 1 312 0 2672 223 40 59 chr5 136221523 136221646 -63408504 - L1ME2 LINE L1 -843 5321 5197 375 298 0 0 chr5 136224886 136224970 -63405180 - MIR3 SINE MIR -14 194 111 430 216 0 41 chr5 136224986 136225083 -63405067 + MER81 DNA DNA 20 112 -2 371 311 106 37 chr5 136226040 136226524 -63403626 + L2 LINE L2 2226 2825 -489 367 229 18 84 chr5 136226548 136226714 -63403436 - L1ME2 LINE L1 -2886 3260 3106 2321 191 40 17 chr5 136226725 136227250 -63402900 - LTR8A LTR ERV1 0 727 191 339 121 0 15 chr5 136227252 136227318 -63402832 - LTR8A LTR ERV1 -662 65 1 414 316 80 57 chr5 136227325 136227390 -63402760 - L1ME2 LINE L1 -3093 3053 2991 4015 155 59 25 chr5 136227390 136228189 -63401961 + LTR1B LTR ERV1 1 826 0 414 316 80 57 chr5 136228189 136228545 -63401605 - L1ME2 LINE L1 -3155 2991 2636 498 136 0 0 chr5 136228546 136228627 -63401523 + (TA)n Simple_repeat Simple_repeat 2 82 0 456 294 108 25 chr5 136228693 136229173 -63400977 - HAL1 LINE L1 -873 1634 1115 2230 94 0 13 chr5 136229579 136229877 -63400273 + AluSx SINE Alu 1 294 -18 305 290 98 33 chr5 136230917 136231100 -63399050 - MIR SINE MIR -47 215 21 823 241 49 88 chr5 136231407 136231430 -63398720 + LTR16A1 LTR ERVL 23 45 -412 1138 244 150 52 chr5 136231430 136231930 -63398220 - MLT1H LTR MaLR 0 549 1 823 241 49 88 chr5 136231930 136231997 -63398153 + LTR16A1 LTR ERVL 45 113 -344 1026 249 78 36 chr5 136231997 136232355 -63397795 + MLT1A2 LTR MaLR 2 374 0 823 241 49 88 chr5 136232355 136232716 -63397434 + LTR16A1 LTR ERVL 113 457 0 329 270 90 0 chr5 136232852 136232952 -63397198 - MIR SINE MIR 0 262 154 381 43 0 0 chr5 136233446 136233493 -63396657 + (TG)n Simple_repeat Simple_repeat 2 48 0 199 289 0 53 chr5 136233734 136233810 -63396340 - MIR SINE MIR -139 123 52 1642 166 56 124 chr5 136235619 136236120 -63394030 - L1MB3 LINE L1 -2 6181 5715 180 0 0 0 chr5 136236401 136236421 -63393729 + (T)n Simple_repeat Simple_repeat 1 20 0 279 318 47 68 chr5 136236726 136236874 -63393276 + MER5A DNA MER1_type 26 170 -19 1985 81 0 0 chr5 136237687 136237935 -63392215 - AluY SINE Alu -21 290 43 374 186 0 0 chr5 136238163 136238233 -63391917 + MLT1K LTR MaLR 518 587 -1 332 274 0 34 chr5 136239318 136239493 -63390657 + A-rich Low_complexity Low_complexity 5 173 0 2178 129 0 0 chr5 136239710 136240019 -63390131 - AluSq SINE Alu -4 309 1 307 364 12 6 chr5 136240088 136240253 -63389897 + L2 LINE L2 2445 2610 -704 189 319 29 51 chr5 136240450 136240588 -63389562 + L2 LINE L2 2917 3051 -221 1535 103 5 19 chr5 136240857 136241115 -63389035 + AluSg/x SINE Alu 70 324 0 1579 105 0 5 chr5 136241115 136241324 -63388826 - AluSq SINE Alu -83 230 23 762 276 11 62 chr5 136241745 136242020 -63388130 + MIR SINE MIR 2 262 0 2112 137 0 7 chr5 136242196 136242502 -63387648 + AluSx SINE Alu 1 304 -8 389 381 57 0 chr5 136243428 136243604 -63386546 + MER91A DNA MER1_type 2 187 -9 210 274 20 0 chr5 136243624 136243675 -63386475 + MER91A DNA MER1_type 134 185 -5 2143 115 0 0 chr5 136243932 136244220 -63385930 + AluSx SINE Alu 1 288 -24 3890 20 0 0 chr5 136244229 136244688 -63385462 - L1PA2 LINE L1 -1458 4688 4230 7696 14 0 15 chr5 136244689 136246169 -63383981 + L1PA2 LINE L1 4685 6150 -5 346 193 205 0 chr5 136246598 136246681 -63383469 - L2 LINE L2 -1 3312 3213 426 39 0 0 chr5 136248582 136248634 -63381516 + (TA)n Simple_repeat Simple_repeat 2 53 0 2271 101 7 0 chr5 136251461 136251757 -63378393 - AluSx SINE Alu -14 298 1 190 399 56 14 chr5 136252247 136252390 -63377760 + L2 LINE L2 2560 2708 -606 363 343 0 0 chr5 136252579 136252687 -63377463 + MIR SINE MIR 42 149 -113 966 222 5 0 chr5 136252817 136253002 -63377148 + MER5A DNA MER1_type 1 186 -3 1924 157 0 20 chr5 136253031 136253443 -63376707 - AluSx SINE Alu 0 406 1 224 200 0 40 chr5 136254312 136254362 -63375788 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 1472 167 51 16 chr5 136255361 136255673 -63374477 + L1MB4 LINE L1 5845 6167 -13 248 219 0 0 chr5 136255673 136255737 -63374413 + L1MB3 LINE L1 6120 6183 0 2133 123 0 0 chr5 136256225 136256525 -63373625 + AluSx SINE Alu 1 300 -12 824 164 19 25 chr5 136256774 136256933 -63373217 + MER5A DNA MER1_type 32 189 0 180 0 0 0 chr5 136257606 136257626 -63372524 + (TA)n Simple_repeat Simple_repeat 2 21 0 440 288 59 56 chr5 136258766 136259072 -63371078 - MLT1I LTR MaLR -35 374 68 384 327 47 0 chr5 136259129 136259279 -63370871 - MIR SINE MIR -11 251 95 907 192 228 38 chr5 136259738 136260129 -63370021 + MER69 DNA AcHobo 2062 2526 0 343 102 34 0 chr5 136260190 136260249 -63369901 - L1PA10 LINE L1 -3 6165 6105 24 53 0 0 chr5 136260453 136260491 -63369659 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr5 136261510 136261532 -63368618 + (A)n Simple_repeat Simple_repeat 1 22 0 417 287 105 42 chr5 136261580 136261723 -63368427 - MIR3 SINE MIR -23 185 34 224 300 55 55 chr5 136262952 136263062 -63367088 - L2 LINE L2 -18 3254 3145 225 286 0 0 chr5 136263084 136263140 -63367010 + MIR SINE MIR 163 218 -44 243 309 12 0 chr5 136263909 136263993 -63366157 - MER117 DNA MER1_type -34 163 79 253 238 149 66 chr5 136264444 136264625 -63365525 + LTR67 LTR ERVL 356 551 -6 226 383 93 40 chr5 136264900 136265352 -63364798 + L2 LINE L2 2421 2896 -418 215 213 120 13 chr5 136268128 136268203 -63361947 + MIR SINE MIR 66 148 -60 981 207 22 9 chr5 136268433 136268665 -63361485 + L1MB8 LINE L1 5944 6178 0 225 304 0 25 chr5 136268745 136268824 -63361326 + Charlie4 DNA MER1_type 1884 1960 -1 32 26 0 0 chr5 136269045 136269084 -63361066 + AT_rich Low_complexity Low_complexity 1 39 0 334 277 127 12 chr5 136269573 136269739 -63360411 + L1MC4a LINE L1 5709 5893 -1915 28 61 0 0 chr5 136269914 136269963 -63360187 + AT_rich Low_complexity Low_complexity 1 49 0 320 333 9 35 chr5 136270040 136270154 -63359996 - MIR SINE MIR -63 145 35 221 172 47 47 chr5 136270619 136270683 -63359467 + (CAAT)n Simple_repeat Simple_repeat 2 65 0 563 309 64 5 chr5 136270910 136271098 -63359052 + MIR SINE MIR 13 211 -51 208 231 77 22 chr5 136271202 136271293 -63358857 + L2 LINE L2 25 120 -3194 26 0 0 0 chr5 136271677 136271703 -63358447 + AT_rich Low_complexity Low_complexity 1 26 0 300 189 0 147 chr5 136272025 136272120 -63358030 - MIR3 SINE MIR -27 181 101 459 350 67 24 chr5 136272233 136272562 -63357588 + MLT1L LTR MaLR 142 484 -131 331 221 0 0 chr5 136272582 136272659 -63357491 + L1MB8 LINE L1 6091 6167 -11 22 0 0 0 chr5 136273322 136273344 -63356806 + AT_rich Low_complexity Low_complexity 1 22 0 838 137 37 53 chr5 136275249 136275439 -63354711 + MER53 DNA DNA 1 187 -2 21 36 0 0 chr5 136275586 136275614 -63354536 + AT_rich Low_complexity Low_complexity 1 28 0 7553 26 0 3 chr5 136275886 136277312 -63352838 - L1PA4 LINE L1 -1 6154 4733 569 179 9 9 chr5 136277522 136277628 -63352522 + MLT1D LTR MaLR 1 106 -399 644 197 0 0 chr5 136277628 136277745 -63352405 + FLAM_C SINE Alu 1 117 -26 32 0 0 0 chr5 136277748 136277780 -63352370 + AT_rich Low_complexity Low_complexity 1 32 0 1490 172 73 85 chr5 136277780 136277965 -63352185 + MLT1D LTR MaLR 97 283 -222 2300 119 16 26 chr5 136277965 136278344 -63351806 + THE1C LTR MaLR 1 375 0 1490 172 73 85 chr5 136278344 136278570 -63351580 + MLT1D LTR MaLR 283 503 -2 1574 151 68 62 chr5 136278774 136279082 -63351068 + L1M2 LINE L1 4927 5234 -979 2266 90 10 3 chr5 136279082 136279383 -63350767 + AluY SINE Alu 1 303 -8 1574 151 68 62 chr5 136279383 136279622 -63350528 + L1M2 LINE L1 5234 5470 -743 820 144 62 7 chr5 136279622 136279768 -63350382 + FRAM SINE Alu 1 40 0 180 324 15 29 chr5 136279795 136279863 -63350287 - L3 LINE CR1 -27 1550 1484 6802 67 16 0 chr5 136280322 136281483 -63348667 + L1PA14 LINE L1 4319 5509 -652 192 40 0 0 chr5 136281483 136281508 -63348642 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 6802 67 16 0 chr5 136281508 136282172 -63347978 + L1PA14 LINE L1 5509 6161 0 255 340 46 20 chr5 136283915 136284068 -63346082 - MIR3 SINE MIR -42 166 10 212 283 30 81 chr5 136285153 136285252 -63344898 - L3b LINE CR1 -202 1381 1288 612 283 11 5 chr5 136285564 136285751 -63344399 - MLT1J LTR MaLR -323 188 1 21 57 0 0 chr5 136286431 136286466 -63343684 + AT_rich Low_complexity Low_complexity 1 35 0 2435 79 0 19 chr5 136286907 136287222 -63342928 + AluY SINE Alu 1 309 -2 704 318 21 4 chr5 136287432 136287668 -63342482 - MIR SINE MIR -3 259 20 1788 153 36 4 chr5 136288022 136288303 -63341847 + AluJb SINE Alu 1 290 -22 696 270 111 36 chr5 136288421 136288896 -63341254 + MLT1H LTR MaLR 7 549 0 242 189 40 14 chr5 136288984 136289058 -63341092 + MLT1L LTR MaLR 536 611 -4 1868 66 0 66 chr5 136289241 136289499 -63340651 - AluY SINE Alu -15 296 56 347 279 57 19 chr5 136290445 136290603 -63339547 + L1ME4a LINE L1 5947 6110 -11 291 161 0 0 chr5 136291207 136291263 -63338887 + L1MB8 LINE L1 6117 6172 -6 34874 92 15 7 chr5 136291295 136297381 -63332769 + L1PA6 LINE L1 11 6146 -8 31 26 0 0 chr5 136297382 136297420 -63332730 + AT_rich Low_complexity Low_complexity 1 38 0 1003 218 27 26 chr5 136297702 136298198 -63331952 + MLT1F1 LTR MaLR 1 567 0 1206 29 0 0 chr5 136298622 136298762 -63331388 + L1PA5 LINE L1 6006 6145 -9 306 292 281 5 chr5 136299532 136299724 -63330426 + L1ME4a LINE L1 5647 5891 -230 2149 109 53 6 chr5 136300581 136300901 -63329249 - MER1B DNA MER1_type 0 337 3 381 43 0 0 chr5 136301758 136301805 -63328345 + (TG)n Simple_repeat Simple_repeat 2 48 0 201 289 0 53 chr5 136302046 136302122 -63328028 - MIR SINE MIR -139 123 52 1077 171 109 34 chr5 136305478 136305667 -63324483 - L1MD1 LINE L1 0 6242 6022 2099 124 14 0 chr5 136305667 136305957 -63324193 - AluSg SINE Alu -16 294 1 1077 171 109 34 chr5 136305957 136306060 -63324090 - L1MD1 LINE L1 -220 6022 5928 548 196 33 49 chr5 136306031 136306349 -63323801 - L1MCa LINE L1 -4729 1697 1298 * 2568 233 69 42 chr5 136306346 136306779 -63323371 - L1MDa LINE L1 -1450 5090 4670 221 0 0 33 chr5 136306779 136306809 -63323341 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2568 233 69 42 chr5 136306809 136307433 -63322717 - L1MDa LINE L1 -1870 4670 4005 1539 198 94 15 chr5 136307433 136307772 -63322378 + MLT2D LTR ERVL 1 366 -48 444 19 0 0 chr5 136307779 136307832 -63322318 + (TA)n Simple_repeat Simple_repeat 2 54 0 3473 232 40 28 chr5 136307876 136308639 -63321511 - L1MDa LINE L1 -2666 3874 3122 2247 103 3 3 chr5 136308639 136308940 -63321210 + AluSc SINE Alu 1 301 -8 3473 232 40 28 chr5 136308940 136309717 -63320433 - L1MDa LINE L1 -3418 3122 2304 1657 179 7 26 chr5 136309719 136310021 -63320129 + AluJb SINE Alu 1 296 -16 1414 167 36 0 chr5 136310074 136310295 -63319855 - AluJb SINE Alu -83 229 1 216 0 0 0 chr5 136310954 136310978 -63319172 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 1672 191 0 3 chr5 136312328 136312661 -63317489 + AluJo SINE Alu 3 334 0 208 109 22 22 chr5 136313532 136313578 -63316572 + A-rich Low_complexity Low_complexity 2 47 0 6392 147 7 29 chr5 136314489 136315986 -63314164 + L1PA15 LINE L1 4026 5463 -702 2296 77 23 19 chr5 136315986 136316296 -63313854 + AluY SINE Alu 1 311 0 6392 147 7 29 chr5 136316296 136316841 -63313309 + L1PA15 LINE L1 5463 6018 -147 216 0 0 0 chr5 136316891 136316915 -63313235 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1741 171 3 3 chr5 136318162 136318449 -63311701 + AluJo SINE Alu 1 287 -25 210 304 38 38 chr5 136319781 136319860 -63310290 + MER5A DNA MER1_type 13 91 -98 2320 61 0 0 chr5 136321857 136322135 -63308015 + AluY SINE Alu 1 278 -33 252 0 0 0 chr5 136322137 136322165 -63307985 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 2308 109 3 0 chr5 136323194 136323497 -63306653 + AluSx SINE Alu 5 308 -4 1233 178 40 31 chr5 136323779 136324100 -63306050 + MER33 DNA MER1_type 1 324 0 1391 217 61 22 chr5 136324949 136325309 -63304841 - MLT1A2 LTR MaLR 0 374 1 213 328 16 0 chr5 136326409 136326470 -63303680 - L3 LINE CR1 -32 1545 1484 2413 94 3 0 chr5 136326477 136326785 -63303365 - AluSp SINE Alu -4 309 1 1596 199 22 0 chr5 136328633 136328945 -63301205 - MLT1A1 LTR MaLR -46 319 1 987 256 61 74 chr5 136329219 136329933 -63300217 + L2 LINE L2 2600 3313 0 2226 108 3 0 chr5 136330104 136330392 -63299758 + AluSp SINE Alu 1 289 -24 2305 73 3 20 chr5 136330437 136330738 -63299412 - AluSc SINE Alu -13 296 1 313 327 17 11 chr5 136330849 136330983 -63299167 - MER5B DNA MER1_type -33 156 12 435 52 0 0 chr5 136332346 136332404 -63297746 + (TTTAG)n Simple_repeat Simple_repeat 3 60 0 1992 142 3 3 chr5 136332404 136332686 -63297464 - AluSx SINE Alu -30 282 1 2247 105 0 3 chr5 136333545 136333840 -63296310 + AluSg SINE Alu 3 296 -14 2002 169 62 84 chr5 136333952 136334388 -63295762 + MLT1D LTR MaLR 1 426 -79 1981 112 77 0 chr5 136334388 136334673 -63295477 + AluSq SINE Alu 1 307 -6 2002 169 62 84 chr5 136334673 136334750 -63295400 + MLT1D LTR MaLR 426 503 -2 926 316 143 25 chr5 136334898 136335143 -63295007 + L2 LINE L2 1560 1775 -1539 2069 148 3 3 chr5 136335143 136335482 -63294668 - MER44D DNA MER2_type 0 609 1 926 316 143 25 chr5 136335482 136335989 -63294161 + L2 LINE L2 1775 2401 -913 2512 127 21 7 chr5 136336288 136336713 -63293437 + MER57B LTR ERV1 1 431 -3 249 327 73 0 chr5 136338556 136338666 -63291484 - MLT1L LTR MaLR -22 593 476 336 246 79 87 chr5 136338820 136338931 -63291219 - MLT1L LTR MaLR -365 250 140 2466 63 0 0 chr5 136338931 136339230 -63290920 + AluY SINE Alu 1 299 -12 336 246 79 87 chr5 136339230 136339370 -63290780 - MLT1L LTR MaLR -475 140 1 286 323 111 9 chr5 136339409 136339635 -63290515 - MLT1K LTR MaLR 0 588 340 1842 154 0 29 chr5 136339845 136340151 -63289999 - AluJb SINE Alu -15 297 1 22 35 0 0 chr5 136340235 136340264 -63289886 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 136340734 136340756 -63289394 + AT_rich Low_complexity Low_complexity 1 22 0 283 282 100 18 chr5 136340908 136341018 -63289132 + MIR3 SINE MIR 89 207 -1 195 145 81 0 chr5 136341321 136341383 -63288767 + CT-rich Low_complexity Low_complexity 4 70 0 629 127 52 35 chr5 136341400 136341573 -63288577 + CT-rich Low_complexity Low_complexity 1 176 0 1523 157 94 0 chr5 136341574 136341829 -63288321 - AluJb SINE Alu -33 279 1 2194 96 10 16 chr5 136341897 136342200 -63287950 + AluSq SINE Alu 1 301 -12 218 137 0 39 chr5 136342230 136342281 -63287869 + (ATG)n Simple_repeat Simple_repeat 3 51 0 227 219 0 16 chr5 136342754 136342818 -63287332 + GA-rich Low_complexity Low_complexity 2 64 0 888 178 0 0 chr5 136343504 136343684 -63286466 + (CA)n Simple_repeat Simple_repeat 1 180 0 351 214 0 41 chr5 136343677 136343822 -63286328 + (CATA)n Simple_repeat Simple_repeat 4 142 0 * 297 276 102 0 chr5 136344070 136344168 -63285982 - L2 LINE L2 -3 3310 3203 12776 134 17 14 chr5 136344321 136344447 -63285703 + Tigger1 DNA MER2_type 3 127 -2291 1916 159 17 0 chr5 136344447 136344748 -63285402 - AluJb SINE Alu -4 308 3 12776 134 17 14 chr5 136344748 136346776 -63283374 + Tigger1 DNA MER2_type 127 2164 -254 1228 86 59 72 chr5 136346777 136346928 -63283222 + MER30 DNA MER1_type 2 151 -79 2186 91 7 7 chr5 136346928 136347224 -63282926 + AluSc SINE Alu 2 297 -12 1228 86 59 72 chr5 136347224 136347294 -63282856 + MER30 DNA MER1_type 151 220 -10 1552 147 12 0 chr5 136347294 136347553 -63282597 + Tigger1 DNA MER2_type 2157 2418 0 657 242 24 24 chr5 136347696 136347907 -63282243 + MIR SINE MIR 52 262 0 231 245 213 0 chr5 136348023 136348117 -63282033 + MER46C DNA MER2_type 1 114 -224 457 224 333 0 chr5 136348120 136348312 -63281838 + MER46C DNA MER2_type 80 335 -3 184 286 0 0 chr5 136349383 136349432 -63280718 + MIR SINE MIR 106 154 -108 191 351 27 14 chr5 136349444 136349518 -63280632 - MIR SINE MIR -106 102 28 189 0 0 0 chr5 136350167 136350188 -63279962 + (T)n Simple_repeat Simple_repeat 1 21 0 2038 120 0 33 chr5 136350378 136350678 -63279472 + AluSg SINE Alu 1 290 -20 1059 159 0 23 chr5 136350731 136350907 -63279243 + FRAM SINE Alu 1 167 -9 281 321 73 44 chr5 136351288 136351425 -63278725 + L2 LINE L2 3122 3262 -10 22 0 0 0 chr5 136353912 136353934 -63276216 + AT_rich Low_complexity Low_complexity 1 22 0 3532 152 27 66 chr5 136355505 136355796 -63274354 + L1MB3 LINE L1 5426 5727 -456 2008 147 0 13 chr5 136355796 136356103 -63274047 - AluJb SINE Alu -9 303 1 3532 152 27 66 chr5 136356103 136356599 -63273551 + L1MB3 LINE L1 5727 6182 -1 239 373 39 10 chr5 136356720 136356822 -63273328 + MIR3 SINE MIR 89 193 -15 422 294 20 72 chr5 136357411 136357758 -63272392 - MLT1I LTR MaLR -8 401 73 2295 105 3 0 chr5 136357805 136358111 -63272039 + AluSx SINE Alu 1 307 -5 1895 189 73 27 chr5 136358219 136358696 -63271454 - MLT1D LTR MaLR 0 505 7 767 345 61 8 chr5 136358923 136359064 -63271086 + MLT1K LTR MaLR 84 216 -372 2263 100 0 3 chr5 136359064 136359365 -63270785 + AluSq SINE Alu 1 300 -13 767 345 61 8 chr5 136359365 136359701 -63270449 + MLT1K LTR MaLR 216 586 -2 2076 127 0 25 chr5 136360302 136360618 -63269532 - AluSx SINE Alu -4 308 1 26 0 0 0 chr5 136361039 136361065 -63269085 + AT_rich Low_complexity Low_complexity 1 26 0 426 276 59 13 chr5 136362111 136362263 -63267887 + MLT1G1 LTR MaLR 3 161 -434 220 229 271 42 chr5 136362438 136362534 -63267616 - MIR SINE MIR -75 133 16 21 0 0 0 chr5 136363024 136363045 -63267105 + AT_rich Low_complexity Low_complexity 1 21 0 2189 128 0 0 chr5 136364198 136364494 -63265656 + AluSq SINE Alu 1 296 -17 2240 106 0 37 chr5 136365861 136366183 -63263967 + AluSp SINE Alu 1 310 -3 765 153 0 8 chr5 136366322 136366446 -63263704 - FLAM_C SINE Alu -16 127 5 268 358 75 8 chr5 136366505 136366625 -63263525 + MER5A DNA MER1_type 59 186 -3 2023 142 7 3 chr5 136366754 136367049 -63263101 - AluSx SINE Alu -16 296 1 205 262 16 16 chr5 136367219 136367280 -63262870 + MIR3 SINE MIR 99 159 -49 563 279 28 84 chr5 136367344 136367436 -63262714 - Charlie8 DNA MER1_type -68 273 177 1213 111 11 16 chr5 136367436 136367626 -63262524 + L1PA11 LINE L1 5986 6174 0 563 279 28 84 chr5 136367626 136367820 -63262330 - Charlie8 DNA MER1_type -164 177 3 2550 62 3 0 chr5 136368116 136368420 -63261730 + AluY SINE Alu 1 305 -6 454 278 195 15 chr5 136369186 136369391 -63260759 - MIR SINE MIR 0 262 21 358 256 12 0 chr5 136369441 136369523 -63260627 + MIR3 SINE MIR 113 195 -13 21 36 0 0 chr5 136369814 136369842 -63260308 + AT_rich Low_complexity Low_complexity 1 28 0 220 282 64 91 chr5 136370597 136370707 -63259443 - L2 LINE L2 -30 3242 3136 664 326 73 58 chr5 136370780 136371254 -63258896 - L2 LINE L2 -1448 1866 1378 2170 101 0 7 chr5 136371254 136371550 -63258600 + AluSx SINE Alu 1 294 -18 664 326 73 58 chr5 136371550 136371731 -63258419 - L2 LINE L2 -1936 1378 1201 289 101 0 116 chr5 136372137 136372206 -63257944 - Alu SINE Alu -2 300 240 434 127 0 14 chr5 136372206 136372277 -63257873 - LTR8A LTR ERV1 -356 371 302 1232 185 5 18 chr5 136372284 136372506 -63257644 - AluJb SINE Alu -83 229 11 23 0 0 0 chr5 136372712 136372735 -63257415 + AT_rich Low_complexity Low_complexity 1 23 0 2283 109 3 0 chr5 136372906 136373217 -63256933 + AluSx SINE Alu 1 312 0 2089 133 3 0 chr5 136374174 136374474 -63255676 - AluSq SINE Alu -12 301 1 22 56 0 0 chr5 136374521 136374557 -63255593 + AT_rich Low_complexity Low_complexity 1 36 0 2428 84 0 0 chr5 136374605 136374901 -63255249 + AluY SINE Alu 1 296 -15 2265 109 0 3 chr5 136375258 136375562 -63254588 - AluSx SINE Alu -9 303 1 2399 148 30 19 chr5 136375794 136376220 -63253930 - Tigger2a DNA MER2_type -3 431 1 249 313 0 0 chr5 136377950 136378017 -63252133 + MLT1K LTR MaLR 149 215 -373 2239 56 0 0 chr5 136378235 136378527 -63251623 - AluY SINE Alu 0 334 43 352 186 0 0 chr5 136378755 136378825 -63251325 + MLT1K LTR MaLR 518 587 -1 534 188 14 62 chr5 136379996 136380140 -63250010 - L1MB5 LINE L1 -1 6173 6037 366 130 0 0 chr5 136380629 136380683 -63249467 - AluY SINE Alu -248 54 1 2145 131 0 0 chr5 136381635 136381933 -63248217 - AluSx SINE Alu -14 298 1 24 32 0 0 chr5 136381985 136382016 -63248134 + AT_rich Low_complexity Low_complexity 1 31 0 7714 15 0 0 chr5 136382016 136383500 -63246650 - L1PA2 LINE L1 -1 6154 4685 3725 20 0 0 chr5 136383501 136383960 -63246190 + L1PA2 LINE L1 4230 4688 -1458 1170 132 0 0 chr5 136383964 136384123 -63246027 - AluSg/x SINE Alu -19 291 133 396 288 71 54 chr5 136384272 136384567 -63245583 + MLT1K LTR MaLR 140 439 -149 286 253 147 20 chr5 136386188 136386338 -63243812 + MIR SINE MIR 94 262 0 198 0 0 0 chr5 136386545 136386567 -63243583 + (A)n Simple_repeat Simple_repeat 1 22 0 231 267 17 17 chr5 136388491 136388551 -63241599 - MER5A DNA MER1_type -1 188 129 2170 168 82 20 chr5 136388554 136389053 -63241097 + L1MB7 LINE L1 5607 6136 -48 235 339 161 0 chr5 136389082 136389200 -63240950 - MER5A DNA MER1_type -52 137 1 608 254 22 39 chr5 136389628 136389809 -63240341 - MER5B DNA MER1_type 0 178 1 314 320 16 0 chr5 136389972 136390097 -63240053 - L2 LINE L2 -242 3030 2904 2079 115 3 3 chr5 136391596 136391884 -63238266 + AluSx SINE Alu 1 288 -24 22 0 0 0 chr5 136391894 136391916 -63238234 + AT_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr5 136392173 136392208 -63237942 + AT_rich Low_complexity Low_complexity 1 35 0 188 132 0 26 chr5 136392313 136392351 -63237799 + (CA)n Simple_repeat Simple_repeat 1 37 0 484 291 49 20 chr5 136392404 136392607 -63237543 + MER63A DNA MER1_type 2 210 0 717 299 19 43 chr5 136393694 136394019 -63236131 - L2 LINE L2 -65 3248 2932 196 272 48 80 chr5 136396670 136396795 -63233355 - L3 LINE CR1 -12 1565 1445 2281 107 38 7 chr5 136397473 136397920 -63232230 + L1PA16 LINE L1 5386 5922 -244 1208 71 71 0 chr5 136397925 136398095 -63232055 + L1PA16 LINE L1 5980 6161 -5 22 35 0 0 chr5 136398095 136398124 -63232026 + AT_rich Low_complexity Low_complexity 1 29 0 2339 95 0 0 chr5 136399206 136399502 -63230648 - AluSq SINE Alu -16 297 2 449 334 35 98 chr5 136399757 136400074 -63230076 - L2 LINE L2 -5 3267 2971 1813 170 50 31 chr5 136401620 136402003 -63228147 - MLT1B LTR MaLR 0 390 1 354 123 0 0 chr5 136402646 136402703 -63227447 + (TG)n Simple_repeat Simple_repeat 1 57 0 447 337 61 14 chr5 136403336 136403700 -63226450 + L1ME4a LINE L1 5276 5659 -505 1635 173 76 82 chr5 136405260 136405797 -63224353 + MER34B LTR ERV1 12 545 -20 22 56 0 0 chr5 136406504 136406540 -63223610 + AT_rich Low_complexity Low_complexity 1 36 0 2106 119 41 25 chr5 136406828 136407190 -63222960 - THE1C LTR MaLR -7 368 1 5080 114 11 3 chr5 136407190 136407937 -63222213 - THE1C-int LTR MaLR 0 1580 828 2071 106 3 31 chr5 136408063 136408356 -63221794 + AluSc SINE Alu 10 294 -15 190 239 65 0 chr5 136408553 136408599 -63221551 + L2 LINE L2 3202 3250 -22 535 246 120 35 chr5 136409544 136409910 -63220240 + L1ME4a LINE L1 5725 6121 0 31 44 0 0 chr5 136409922 136409967 -63220183 + AT_rich Low_complexity Low_complexity 1 45 0 429 299 8 0 chr5 136410269 136410386 -63219764 + MIR SINE MIR 145 262 0 41 21 0 0 chr5 136410930 136410978 -63219172 + AT_rich Low_complexity Low_complexity 1 48 0 430 301 70 44 chr5 136412324 136412441 -63217709 - Charlie8 DNA MER1_type -69 272 160 791 195 11 54 chr5 136412441 136412544 -63217606 + MER45A DNA AcHobo 1 94 -1487 1544 200 6 19 chr5 136412544 136412859 -63217291 - AluJo SINE Alu -1 311 1 791 195 11 54 chr5 136412859 136412940 -63217210 + MER45A DNA AcHobo 94 177 -1 430 301 70 44 chr5 136412940 136413051 -63217099 - Charlie8 DNA MER1_type -181 160 38 260 297 77 0 chr5 136413109 136413200 -63216950 - MIR3 SINE MIR -6 202 105 2463 74 0 13 chr5 136413371 136413680 -63216470 - AluY SINE Alu -6 305 1 2221 118 0 0 chr5 136413784 136414080 -63216070 - AluSx SINE Alu -16 296 1 224 230 27 40 chr5 136415824 136415898 -63214252 - MIR3 SINE MIR -24 184 112 352 221 52 103 chr5 136416233 136416351 -63213799 + L2 LINE L2 3185 3297 -16 2407 81 0 0 chr5 136416351 136416648 -63213502 + AluSg SINE Alu 1 297 -13 352 221 52 103 chr5 136416648 136416665 -63213485 + L2 LINE L2 3297 3313 0 2230 126 0 0 chr5 136416802 136417111 -63213039 - AluSq SINE Alu -4 309 1 180 0 0 0 chr5 136417161 136417181 -63212969 + (A)n Simple_repeat Simple_repeat 1 20 0 315 364 12 6 chr5 136417181 136417346 -63212804 + L2 LINE L2 2445 2610 -704 189 319 29 51 chr5 136417543 136417681 -63212469 + L2 LINE L2 2917 3051 -221 1544 103 5 19 chr5 136417950 136418212 -63211938 + AluSg/x SINE Alu 70 328 0 1586 105 0 5 chr5 136418212 136418421 -63211729 - AluSq SINE Alu -83 230 23 763 276 11 62 chr5 136418842 136419117 -63211033 + MIR SINE MIR 2 262 0 2132 137 0 7 chr5 136419293 136419599 -63210551 + AluSx SINE Alu 1 304 -8 400 381 57 0 chr5 136420525 136420701 -63209449 + MER91A DNA MER1_type 2 187 -9 212 274 20 0 chr5 136420721 136420772 -63209378 + MER91A DNA MER1_type 134 185 -5 2127 131 0 0 chr5 136421029 136421341 -63208809 + AluSx SINE Alu 1 312 0 2365 96 0 0 chr5 136421809 136422101 -63208049 - AluSg SINE Alu -18 292 1 266 353 38 0 chr5 136422101 136422234 -63207916 + L2 LINE L2 1616 1753 -1561 557 314 59 46 chr5 136422936 136423158 -63206992 - HERV16-C2 LTR ERVL -4517 479 248 2285 59 24 3 chr5 136423158 136423445 -63206705 + AluY SINE Alu 1 293 -18 557 314 59 46 chr5 136423445 136423614 -63206536 - HERV16-C2 LTR ERVL -4748 248 83 2118 123 3 0 chr5 136423836 136424159 -63205991 + AluSq SINE Alu 1 324 0 520 284 80 46 chr5 136424279 136424667 -63205483 + L2 LINE L2 1844 2244 -1070 1384 123 159 36 chr5 136424667 136424969 -63205181 + MER44D DNA MER2_type 1 609 0 12790 126 55 50 chr5 136425033 136427438 -63202712 - Tigger1 DNA MER2_type 0 2418 1 517 328 81 26 chr5 136427547 136427855 -63202295 + L2 LINE L2 2369 2693 -621 2179 166 10 68 chr5 136427857 136428339 -63201811 - MLT2C2 LTR ERVL -8 456 3 539 303 35 0 chr5 136428352 136428497 -63201653 + MIR SINE MIR 111 260 -2 306 335 60 87 chr5 136428605 136428975 -63201175 + L2 LINE L2 2850 3209 -63 204 219 0 0 chr5 136429378 136429419 -63200731 - L2 LINE L2 -84 3229 3189 264 311 0 0 chr5 136429684 136429758 -63200392 + MER5A DNA MER1_type 115 188 -1 356 315 39 16 chr5 136429763 136429890 -63200260 + MER5B DNA MER1_type 5 134 -44 466 296 39 29 chr5 136429911 136430191 -63199959 - L1MEd LINE L1 -4873 1246 964 657 298 81 57 chr5 136430277 136430649 -63199501 + L2 LINE L2 2892 3272 0 2284 107 7 0 chr5 136431352 136431652 -63198498 - AluSp SINE Alu -11 302 1 2071 131 3 0 chr5 136431717 136432007 -63198143 + AluSx SINE Alu 1 291 -21 280 318 47 68 chr5 136432821 136432969 -63197181 - MER5A DNA MER1_type -19 170 26 25 0 0 0 chr5 136433267 136433292 -63196858 + AT_rich Low_complexity Low_complexity 1 25 0 1691 155 52 122 chr5 136433573 136434075 -63196075 + L1MB3 LINE L1 5715 6181 -2 2180 103 0 7 chr5 136435209 136435510 -63194640 + AluY SINE Alu 1 299 -12 210 71 0 0 chr5 136438342 136438370 -63191780 + (T)n Simple_repeat Simple_repeat 1 28 0 212 324 94 47 chr5 136438660 136438830 -63191320 + MIR3 SINE MIR 31 208 0 1032 176 0 6 chr5 136438946 136439116 -63191034 + AluSq SINE Alu 1 169 -144 761 293 67 17 chr5 136439211 136439385 -63190765 + MIR SINE MIR 4 196 -66 2149 108 0 3 chr5 136439385 136439694 -63190456 + AluSq SINE Alu 1 308 0 761 293 67 17 chr5 136439694 136439757 -63190393 + MIR SINE MIR 196 254 -8 280 253 13 27 chr5 136439806 136439881 -63190269 - L3 LINE CR1 -136 1441 1368 198 0 0 0 chr5 136440742 136440764 -63189386 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 538 338 34 34 chr5 136442917 136443213 -63186937 - L3 LINE CR1 -91 1486 1191 222 309 81 54 chr5 136443351 136443500 -63186650 - L3 LINE CR1 -1122 455 303 210 304 38 38 chr5 136445746 136445825 -63184325 + MER5A DNA MER1_type 13 91 -98 2320 61 0 0 chr5 136447822 136448100 -63182050 + AluY SINE Alu 1 278 -33 252 0 0 0 chr5 136448102 136448130 -63182020 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 2300 109 3 0 chr5 136449158 136449460 -63180690 + AluSx SINE Alu 5 307 -5 1233 178 40 31 chr5 136449742 136450063 -63180087 + MER33 DNA MER1_type 1 324 0 1391 217 61 22 chr5 136450911 136451271 -63178879 - MLT1A2 LTR MaLR 0 374 1 213 328 16 0 chr5 136452371 136452432 -63177718 - L3 LINE CR1 -32 1545 1484 2413 94 3 0 chr5 136452439 136452747 -63177403 - AluSp SINE Alu -4 309 1 1596 199 22 0 chr5 136454595 136454907 -63175243 - MLT1A1 LTR MaLR -46 319 1 987 256 61 74 chr5 136455181 136455895 -63174255 + L2 LINE L2 2600 3313 0 2226 108 3 0 chr5 136456066 136456354 -63173796 + AluSp SINE Alu 1 289 -24 2305 73 3 20 chr5 136456399 136456700 -63173450 - AluSc SINE Alu -13 296 1 313 327 17 11 chr5 136456811 136456945 -63173205 - MER5B DNA MER1_type -33 156 12 435 52 0 0 chr5 136458308 136458366 -63171784 + (TTTAG)n Simple_repeat Simple_repeat 3 60 0 1992 142 3 3 chr5 136458366 136458648 -63171502 - AluSx SINE Alu -30 282 1 2247 105 0 3 chr5 136459507 136459802 -63170348 + AluSg SINE Alu 3 296 -14 2002 169 62 84 chr5 136459914 136460350 -63169800 + MLT1D LTR MaLR 1 426 -79 1981 112 77 0 chr5 136460350 136460635 -63169515 + AluSq SINE Alu 1 307 -6 2002 169 62 84 chr5 136460635 136460712 -63169438 + MLT1D LTR MaLR 426 503 -2 926 316 143 25 chr5 136460860 136461105 -63169045 + L2 LINE L2 1560 1775 -1539 2069 148 3 3 chr5 136461105 136461444 -63168706 - MER44D DNA MER2_type 0 609 1 926 316 143 25 chr5 136461444 136461951 -63168199 + L2 LINE L2 1775 2401 -913 2512 127 21 7 chr5 136462250 136462675 -63167475 + MER57B LTR ERV1 1 431 -3 249 327 73 0 chr5 136464518 136464628 -63165522 - MLT1L LTR MaLR -22 593 476 336 246 79 87 chr5 136464782 136464893 -63165257 - MLT1L LTR MaLR -365 250 140 2466 63 0 0 chr5 136464893 136465192 -63164958 + AluY SINE Alu 1 299 -12 336 246 79 87 chr5 136465192 136465332 -63164818 - MLT1L LTR MaLR -475 140 1 286 323 111 9 chr5 136465371 136465597 -63164553 - MLT1K LTR MaLR 0 588 340 1842 154 0 29 chr5 136465807 136466113 -63164037 - AluJb SINE Alu -15 297 1 22 35 0 0 chr5 136466197 136466226 -63163924 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 136466696 136466718 -63163432 + AT_rich Low_complexity Low_complexity 1 22 0 283 282 100 18 chr5 136466870 136466980 -63163170 + MIR3 SINE MIR 89 207 -1 195 145 81 0 chr5 136467283 136467345 -63162805 + CT-rich Low_complexity Low_complexity 4 70 0 629 127 52 35 chr5 136467362 136467535 -63162615 + CT-rich Low_complexity Low_complexity 1 176 0 1523 157 94 0 chr5 136467536 136467791 -63162359 - AluJb SINE Alu -33 279 1 2194 96 10 16 chr5 136467859 136468162 -63161988 + AluSq SINE Alu 1 301 -12 218 137 0 39 chr5 136468192 136468243 -63161907 + (ATG)n Simple_repeat Simple_repeat 3 51 0 227 219 0 16 chr5 136468715 136468779 -63161371 + GA-rich Low_complexity Low_complexity 2 64 0 888 178 0 0 chr5 136469465 136469645 -63160505 + (CA)n Simple_repeat Simple_repeat 1 180 0 351 214 0 41 chr5 136469638 136469783 -63160367 + (CATA)n Simple_repeat Simple_repeat 4 142 0 * 297 276 102 0 chr5 136470031 136470129 -63160021 - L2 LINE L2 -3 3310 3203 12776 134 17 14 chr5 136470282 136470408 -63159742 + Tigger1 DNA MER2_type 3 127 -2291 1916 159 17 0 chr5 136470408 136470709 -63159441 - AluJb SINE Alu -4 308 3 12776 134 17 14 chr5 136470709 136472737 -63157413 + Tigger1 DNA MER2_type 127 2164 -254 1228 86 59 72 chr5 136472738 136472889 -63157261 + MER30 DNA MER1_type 2 151 -79 2186 91 7 7 chr5 136472889 136473185 -63156965 + AluSc SINE Alu 2 297 -12 1228 86 59 72 chr5 136473185 136473255 -63156895 + MER30 DNA MER1_type 151 220 -10 1552 147 12 0 chr5 136473255 136473514 -63156636 + Tigger1 DNA MER2_type 2157 2418 0 657 242 24 24 chr5 136473657 136473868 -63156282 + MIR SINE MIR 52 262 0 231 245 213 0 chr5 136473984 136474078 -63156072 + MER46C DNA MER2_type 1 114 -224 457 224 333 0 chr5 136474081 136474273 -63155877 + MER46C DNA MER2_type 80 335 -3 184 286 0 0 chr5 136475344 136475393 -63154757 + MIR SINE MIR 106 154 -108 191 351 27 14 chr5 136475405 136475479 -63154671 - MIR SINE MIR -106 102 28 189 0 0 0 chr5 136476128 136476149 -63154001 + (T)n Simple_repeat Simple_repeat 1 21 0 2038 120 0 33 chr5 136476339 136476639 -63153511 + AluSg SINE Alu 1 290 -20 1067 158 0 23 chr5 136476692 136476869 -63153281 + FRAM SINE Alu 1 168 -8 281 321 73 44 chr5 136477250 136477387 -63152763 + L2 LINE L2 3122 3262 -10 22 0 0 0 chr5 136479874 136479896 -63150254 + AT_rich Low_complexity Low_complexity 1 22 0 3532 152 27 66 chr5 136481467 136481758 -63148392 + L1MB3 LINE L1 5426 5727 -456 2008 147 0 13 chr5 136481758 136482065 -63148085 - AluJb SINE Alu -9 303 1 3532 152 27 66 chr5 136482065 136482561 -63147589 + L1MB3 LINE L1 5727 6182 -1 239 373 39 10 chr5 136482682 136482784 -63147366 + MIR3 SINE MIR 89 193 -15 422 294 20 72 chr5 136483373 136483720 -63146430 - MLT1I LTR MaLR -8 401 73 2295 105 3 0 chr5 136483767 136484073 -63146077 + AluSx SINE Alu 1 307 -5 1895 189 73 27 chr5 136484181 136484658 -63145492 - MLT1D LTR MaLR 0 505 7 767 345 61 8 chr5 136484885 136485026 -63145124 + MLT1K LTR MaLR 84 216 -372 2263 100 0 3 chr5 136485026 136485327 -63144823 + AluSq SINE Alu 1 300 -13 767 345 61 8 chr5 136485327 136485663 -63144487 + MLT1K LTR MaLR 216 586 -2 2076 127 0 25 chr5 136486264 136486580 -63143570 - AluSx SINE Alu -4 308 1 26 0 0 0 chr5 136487001 136487027 -63143123 + AT_rich Low_complexity Low_complexity 1 26 0 426 276 59 13 chr5 136488073 136488225 -63141925 + MLT1G1 LTR MaLR 3 161 -434 220 229 271 42 chr5 136488400 136488496 -63141654 - MIR SINE MIR -75 133 16 21 0 0 0 chr5 136488986 136489007 -63141143 + AT_rich Low_complexity Low_complexity 1 21 0 2189 128 0 0 chr5 136490160 136490456 -63139694 + AluSq SINE Alu 1 296 -17 2240 106 0 37 chr5 136491823 136492145 -63138005 + AluSp SINE Alu 1 310 -3 765 153 0 8 chr5 136492284 136492408 -63137742 - FLAM_C SINE Alu -16 127 5 268 358 75 8 chr5 136492467 136492587 -63137563 + MER5A DNA MER1_type 59 186 -3 2023 142 7 3 chr5 136492716 136493011 -63137139 - AluSx SINE Alu -16 296 1 205 262 16 16 chr5 136493181 136493242 -63136908 + MIR3 SINE MIR 99 159 -49 563 279 28 84 chr5 136493306 136493398 -63136752 - Charlie8 DNA MER1_type -68 273 177 1213 111 11 16 chr5 136493398 136493588 -63136562 + L1PA11 LINE L1 5986 6174 0 563 279 28 84 chr5 136493588 136493782 -63136368 - Charlie8 DNA MER1_type -164 177 3 2541 63 3 0 chr5 136494078 136494381 -63135769 + AluY SINE Alu 1 304 -7 454 278 195 15 chr5 136495147 136495352 -63134798 - MIR SINE MIR 0 262 21 358 256 12 0 chr5 136495402 136495484 -63134666 + MIR3 SINE MIR 113 195 -13 21 36 0 0 chr5 136495775 136495803 -63134347 + AT_rich Low_complexity Low_complexity 1 28 0 220 282 64 91 chr5 136496558 136496668 -63133482 - L2 LINE L2 -30 3242 3136 664 326 73 58 chr5 136496741 136497215 -63132935 - L2 LINE L2 -1448 1866 1378 2170 101 0 7 chr5 136497215 136497511 -63132639 + AluSx SINE Alu 1 294 -18 664 326 73 58 chr5 136497511 136497692 -63132458 - L2 LINE L2 -1936 1378 1201 289 101 0 116 chr5 136498098 136498167 -63131983 - Alu SINE Alu -2 300 240 434 127 0 14 chr5 136498167 136498238 -63131912 - LTR8A LTR ERV1 -356 371 302 1232 185 5 18 chr5 136498245 136498467 -63131683 - AluJb SINE Alu -83 229 11 23 0 0 0 chr5 136498673 136498696 -63131454 + AT_rich Low_complexity Low_complexity 1 23 0 2283 109 3 0 chr5 136498867 136499178 -63130972 + AluSx SINE Alu 1 312 0 2089 133 3 0 chr5 136500135 136500435 -63129715 - AluSq SINE Alu -12 301 1 22 56 0 0 chr5 136500482 136500518 -63129632 + AT_rich Low_complexity Low_complexity 1 36 0 2428 84 0 0 chr5 136500566 136500862 -63129288 + AluY SINE Alu 1 296 -15 2265 109 0 3 chr5 136501219 136501523 -63128627 - AluSx SINE Alu -9 303 1 2399 148 30 19 chr5 136501755 136502181 -63127969 - Tigger2a DNA MER2_type -3 431 1 249 313 0 0 chr5 136503911 136503978 -63126172 + MLT1K LTR MaLR 149 215 -373 2218 60 0 0 chr5 136504196 136504465 -63125685 - AluY SINE Alu 0 311 43 352 186 0 0 chr5 136504693 136504763 -63125387 + MLT1K LTR MaLR 518 587 -1 534 188 14 62 chr5 136505934 136506078 -63124072 - L1MB5 LINE L1 -1 6173 6037 366 130 0 0 chr5 136506567 136506621 -63123529 - AluY SINE Alu -245 54 1 2145 131 0 0 chr5 136507573 136507871 -63122279 - AluSx SINE Alu -14 298 1 24 32 0 0 chr5 136507923 136507954 -63122196 + AT_rich Low_complexity Low_complexity 1 31 0 7714 15 0 0 chr5 136507954 136509438 -63120712 - L1PA2 LINE L1 -1 6154 4685 3725 20 0 0 chr5 136509439 136509898 -63120252 + L1PA2 LINE L1 4230 4688 -1458 1170 132 0 0 chr5 136509902 136510061 -63120089 - AluSg/x SINE Alu -19 293 135 396 288 71 54 chr5 136510210 136510505 -63119645 + MLT1K LTR MaLR 140 439 -149 286 253 147 20 chr5 136512126 136512276 -63117874 + MIR SINE MIR 94 262 0 198 0 0 0 chr5 136512483 136512505 -63117645 + (A)n Simple_repeat Simple_repeat 1 22 0 222 309 81 54 chr5 136515414 136515563 -63114587 + L3 LINE CR1 303 455 -1122 538 338 34 34 chr5 136515701 136515997 -63114153 + L3 LINE CR1 1191 1486 -91 198 0 0 0 chr5 136518149 136518171 -63111979 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 280 253 13 27 chr5 136519032 136519107 -63111043 + L3 LINE CR1 1368 1441 -136 761 293 67 17 chr5 136519156 136519219 -63110931 - MIR SINE MIR -8 254 196 2148 108 0 3 chr5 136519219 136519528 -63110622 - AluSq SINE Alu 0 308 1 761 293 67 17 chr5 136519528 136519702 -63110448 - MIR SINE MIR -66 196 4 1045 171 0 6 chr5 136519797 136519967 -63110183 - AluSq SINE Alu -144 169 1 212 324 94 47 chr5 136520083 136520253 -63109897 - MIR3 SINE MIR 0 208 31 201 74 0 0 chr5 136520543 136520570 -63109580 + (A)n Simple_repeat Simple_repeat 1 27 0 2191 100 0 7 chr5 136523402 136523703 -63106447 - AluY SINE Alu -12 299 1 1707 153 52 122 chr5 136524837 136525339 -63104811 - L1MB3 LINE L1 -2 6181 5715 180 0 0 0 chr5 136525620 136525640 -63104510 + (T)n Simple_repeat Simple_repeat 1 20 0 280 318 47 68 chr5 136525945 136526093 -63104057 + MER5A DNA MER1_type 26 170 -19 2071 131 3 0 chr5 136526906 136527196 -63102954 - AluSx SINE Alu -21 291 1 2284 107 7 0 chr5 136527261 136527561 -63102589 + AluSp SINE Alu 1 302 -11 657 298 81 57 chr5 136528264 136528636 -63101514 - L2 LINE L2 0 3272 2892 466 296 39 29 chr5 136528722 136529002 -63101148 + L1MEd LINE L1 964 1246 -4873 356 315 39 16 chr5 136529024 136529151 -63100999 - MER5B DNA MER1_type -44 134 5 264 311 0 0 chr5 136529156 136529230 -63100920 - MER5A DNA MER1_type -1 188 115 204 219 0 0 chr5 136529495 136529536 -63100614 + L2 LINE L2 3189 3229 -84 320 332 60 87 chr5 136529939 136530309 -63099841 - L2 LINE L2 -63 3209 2850 539 303 35 0 chr5 136530417 136530562 -63099588 - MIR SINE MIR -2 260 111 2165 168 10 68 chr5 136530575 136531057 -63099093 + MLT2C2 LTR ERVL 3 456 -8 517 328 81 26 chr5 136531059 136531367 -63098783 - L2 LINE L2 -621 2693 2369 12749 127 55 50 chr5 136531476 136533881 -63096269 + Tigger1 DNA MER2_type 1 2418 0 1384 123 159 36 chr5 136533945 136534247 -63095903 - MER44D DNA MER2_type 0 609 1 506 286 80 46 chr5 136534247 136534635 -63095515 - L2 LINE L2 -1070 2244 1844 2117 123 3 0 chr5 136534755 136535078 -63095072 - AluSq SINE Alu 0 324 1 599 306 59 46 chr5 136535300 136535469 -63094681 + HERV16-C2 LTR ERVL 83 248 -4748 2285 59 24 3 chr5 136535469 136535756 -63094394 - AluY SINE Alu -18 293 1 599 306 59 46 chr5 136535756 136535978 -63094172 + HERV16-C2 LTR ERVL 248 479 -4517 266 353 38 0 chr5 136536680 136536813 -63093337 - L2 LINE L2 -1561 1753 1616 2378 92 0 0 chr5 136536813 136537105 -63093045 + AluSg SINE Alu 1 292 -18 2127 131 0 0 chr5 136537573 136537885 -63092265 - AluSx SINE Alu 0 312 1 212 274 20 0 chr5 136538142 136538193 -63091957 - MER91A DNA MER1_type -5 185 134 400 381 57 0 chr5 136538213 136538389 -63091761 - MER91A DNA MER1_type -9 187 2 2132 137 0 7 chr5 136539315 136539621 -63090529 - AluSx SINE Alu -8 304 1 763 276 11 62 chr5 136539796 136540071 -63090079 - MIR SINE MIR 0 262 2 1586 105 0 5 chr5 136540492 136540701 -63089449 + AluSq SINE Alu 23 230 -83 1543 103 5 19 chr5 136540701 136540959 -63089191 - AluSg/x SINE Alu 0 326 72 189 319 29 51 chr5 136541228 136541366 -63088784 - L2 LINE L2 -221 3051 2917 315 364 12 6 chr5 136541563 136541728 -63088422 - L2 LINE L2 -704 2610 2445 180 0 0 0 chr5 136541728 136541748 -63088402 + (T)n Simple_repeat Simple_repeat 1 20 0 2230 126 0 0 chr5 136541798 136542107 -63088043 + AluSq SINE Alu 1 309 -4 352 221 52 103 chr5 136542244 136542261 -63087889 - L2 LINE L2 0 3313 3297 2417 81 0 0 chr5 136542261 136542559 -63087591 - AluSg SINE Alu -12 298 1 352 221 52 103 chr5 136542559 136542677 -63087473 - L2 LINE L2 -16 3297 3185 224 230 27 40 chr5 136543012 136543086 -63087064 + MIR3 SINE MIR 112 184 -24 2221 118 0 0 chr5 136544830 136545126 -63085024 + AluSx SINE Alu 1 296 -16 2391 84 0 13 chr5 136545230 136545538 -63084612 + AluY SINE Alu 1 304 -7 260 297 77 0 chr5 136545709 136545800 -63084350 + MIR3 SINE MIR 105 202 -6 430 301 70 44 chr5 136545858 136545969 -63084181 + Charlie8 DNA MER1_type 38 145 -196 809 198 11 39 chr5 136545969 136546050 -63084100 - MER45A DNA AcHobo -1404 177 95 1515 195 6 31 chr5 136546050 136546368 -63083782 + AluJo SINE Alu 1 310 -2 809 198 11 39 chr5 136546368 136546468 -63083682 - MER45A DNA AcHobo -1486 95 1 430 301 70 44 chr5 136546468 136546585 -63083565 + Charlie8 DNA MER1_type 145 272 -69 45 19 0 0 chr5 136547932 136547984 -63082166 + AT_rich Low_complexity Low_complexity 1 52 0 429 299 8 0 chr5 136548528 136548645 -63081505 - MIR SINE MIR 0 262 145 31 44 0 0 chr5 136548947 136548992 -63081158 + AT_rich Low_complexity Low_complexity 1 45 0 518 249 120 35 chr5 136549004 136549370 -63080780 - L1ME4a LINE L1 0 6121 5725 190 239 65 0 chr5 136550315 136550361 -63079789 - L2 LINE L2 -22 3250 3202 2071 106 3 31 chr5 136550558 136550851 -63079299 - AluSc SINE Alu -15 294 10 1950 143 55 22 chr5 136550988 136551351 -63078799 + THE1C LTR MaLR 1 375 0 7679 128 64 4 chr5 136551412 136552674 -63077476 + THE1C-int LTR MaLR 243 1580 0 2106 119 41 25 chr5 136552674 136553036 -63077114 + THE1C LTR MaLR 1 368 -7 22 56 0 0 chr5 136553324 136553360 -63076790 + AT_rich Low_complexity Low_complexity 1 36 0 1637 173 76 82 chr5 136554067 136554604 -63075546 - MER34B LTR ERV1 -20 545 12 447 337 61 14 chr5 136556164 136556528 -63073622 - L1ME4a LINE L1 -505 5659 5276 354 123 0 0 chr5 136557157 136557214 -63072936 + (CA)n Simple_repeat Simple_repeat 1 57 0 1813 170 50 31 chr5 136557854 136558237 -63071913 + MLT1B LTR MaLR 1 390 0 457 334 35 98 chr5 136559790 136560107 -63070043 + L2 LINE L2 2971 3267 -5 2339 95 0 0 chr5 136560362 136560658 -63069492 + AluSq SINE Alu 2 297 -16 22 35 0 0 chr5 136561740 136561769 -63068381 + AT_rich Low_complexity Low_complexity 1 29 0 1208 71 71 0 chr5 136561769 136561939 -63068211 - L1PA16 LINE L1 -5 6161 5980 2281 107 38 7 chr5 136561944 136562391 -63067759 - L1PA16 LINE L1 -244 5922 5386 196 272 48 80 chr5 136563069 136563194 -63066956 + L3 LINE CR1 1445 1565 -12 717 299 19 43 chr5 136565845 136566170 -63063980 + L2 LINE L2 2932 3248 -65 484 291 49 20 chr5 136567257 136567460 -63062690 - MER63A DNA MER1_type 0 210 2 188 132 0 26 chr5 136567513 136567551 -63062599 + (TG)n Simple_repeat Simple_repeat 1 37 0 28 29 0 0 chr5 136567656 136567691 -63062459 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 136567948 136567970 -63062180 + AT_rich Low_complexity Low_complexity 1 22 0 2079 115 3 3 chr5 136567980 136568268 -63061882 - AluSx SINE Alu -24 288 1 314 320 16 0 chr5 136569767 136569892 -63060258 + L2 LINE L2 2904 3030 -242 608 254 22 39 chr5 136570055 136570236 -63059914 + MER5B DNA MER1_type 1 178 0 235 339 161 0 chr5 136570664 136570782 -63059368 + MER5A DNA MER1_type 1 137 -52 2170 168 82 20 chr5 136570811 136571310 -63058840 - L1MB7 LINE L1 -48 6136 5607 231 267 17 17 chr5 136571313 136571373 -63058777 + MER5A DNA MER1_type 129 188 -1 268 264 11 22 chr5 136571724 136571815 -63058335 + LTR67 LTR ERVL 14 103 -454 405 291 91 5 chr5 136571918 136572117 -63058033 + LTR67 LTR ERVL 291 506 -51 2189 113 3 3 chr5 136572678 136572980 -63057170 - AluY SINE Alu -9 302 1 25 0 0 0 chr5 136573633 136573658 -63056492 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 136575115 136575138 -63055012 + AT_rich Low_complexity Low_complexity 1 23 0 492 232 24 8 chr5 136576120 136576245 -63053905 - MIR SINE MIR -7 255 129 724 302 25 0 chr5 136576389 136576591 -63053559 - MIR SINE MIR -28 234 28 775 267 87 51 chr5 136578063 136578452 -63051698 + MLT1J1 LTR MaLR 39 441 -5 309 174 104 70 chr5 136578611 136578726 -63051424 + Charlie8 DNA MER1_type 33 151 -2266 21 82 0 0 chr5 136579382 136579431 -63050719 + AT_rich Low_complexity Low_complexity 1 49 0 276 173 0 19 chr5 136579692 136579744 -63050406 - L2 LINE L2 -2 3311 3261 204 205 0 0 chr5 136580970 136581010 -63049140 + (ACTG)n Simple_repeat Simple_repeat 1 40 0 234 273 91 23 chr5 136581047 136581179 -63048971 - L2 LINE L2 -73 3240 3100 400 193 122 77 chr5 136581392 136581620 -63048530 - MIR SINE MIR -13 249 18 22 70 0 0 chr5 136583048 136583091 -63047059 + AT_rich Low_complexity Low_complexity 1 43 0 312 387 36 10 chr5 136583161 136583355 -63046795 + MIR SINE MIR 18 216 -46 637 273 80 6 chr5 136583725 136583901 -63046249 - MER5A DNA MER1_type 0 189 1 282 275 11 22 chr5 136583919 136584010 -63046140 - LTR67 LTR ERVL -11 546 457 23 0 0 0 chr5 136585734 136585757 -63044393 + AT_rich Low_complexity Low_complexity 1 23 0 245 273 106 61 chr5 136586291 136586423 -63043727 - L2 LINE L2 -8 3305 3168 714 229 104 30 chr5 136586451 136586832 -63043318 + MER57A LTR ERV1 1 403 0 210 326 44 57 chr5 136586894 136587121 -63043029 - L2 LINE L2 -235 3037 2814 216 0 0 0 chr5 136588165 136588189 -63041961 + (T)n Simple_repeat Simple_repeat 1 24 0 202 352 9 19 chr5 136589495 136589603 -63040547 + L3b LINE CR1 1132 1238 -345 208 103 51 0 chr5 136589811 136589850 -63040300 + (TA)n Simple_repeat Simple_repeat 2 42 0 474 271 100 35 chr5 136589874 136590044 -63040106 + MER5A DNA MER1_type 9 189 0 536 86 0 11 chr5 136590741 136590834 -63039316 + (TA)n Simple_repeat Simple_repeat 1 92 0 187 281 73 37 chr5 136592480 136592562 -63037588 - L2 LINE L2 -2 3311 3227 1280 95 0 6 chr5 136592810 136592979 -63037171 + AluSg/x SINE Alu 126 293 -19 725 199 17 55 chr5 136592979 136593160 -63036990 + MIR SINE MIR 59 232 -30 1772 174 14 3 chr5 136593263 136593556 -63036594 - AluJb SINE Alu -16 296 1 512 278 20 56 chr5 136594038 136594236 -63035914 - MIR SINE MIR 0 262 72 440 296 85 6 chr5 136594545 136594721 -63035429 + MLT1L LTR MaLR 417 606 -9 243 287 48 100 chr5 136594793 136595044 -63035106 - MIR SINE MIR -6 256 19 269 323 0 0 chr5 136595324 136595389 -63034761 + MIR SINE MIR 31 95 -113 965 93 0 0 chr5 136595415 136595544 -63034606 - L1PA16 LINE L1 -9 6157 6029 276 137 0 39 chr5 136595544 136595595 -63034555 + MLT1A2 LTR MaLR 326 374 0 493 196 1 10 chr5 136595595 136595720 -63034430 - L1M4 LINE L1 -5121 1523 1310 644 169 8 0 chr5 136595720 136595850 -63034300 + CT-rich Low_complexity Low_complexity 3 133 0 1438 203 36 14 chr5 136595855 136596014 -63034136 - AluJo SINE Alu -24 288 134 222 37 0 0 chr5 136596014 136596041 -63034109 + (TA)n Simple_repeat Simple_repeat 1 27 0 2676 93 11 11 chr5 136596048 136596423 -63033727 + THE1C LTR MaLR 1 375 0 1438 203 36 14 chr5 136596423 136596536 -63033614 - AluJo SINE Alu -183 129 2 1171 237 83 33 chr5 136596537 136596993 -63033157 - L1M4 LINE L1 -5228 1314 836 396 285 15 22 chr5 136597015 136597152 -63032998 - L1M4 LINE L1 -6218 428 293 21 36 0 0 chr5 136597687 136597715 -63032435 + AT_rich Low_complexity Low_complexity 1 28 0 1903 150 35 5 chr5 136597865 136598239 -63031911 + L1MA4 LINE L1 5911 6295 -5 813 278 4 52 chr5 136598264 136598516 -63031634 - MLT1-int LTR MaLR -234 1501 1262 280 233 0 0 chr5 136598863 136598923 -63031227 - MLT1-int LTR MaLR -488 883 824 369 118 4 16 chr5 136598928 136599002 -63031148 - MLT-int LTR MaLR -677 694 609 * 1721 213 104 9 chr5 136598982 136599405 -63030745 - MLT1A1-int LTR MaLR -1270 465 3 1278 224 44 36 chr5 136599405 136599767 -63030383 - MLT1A1 LTR MaLR 0 365 1 463 254 0 0 chr5 136599773 136599887 -63030263 + L1M4c LINE L1 1155 1268 -5116 2062 248 18 26 chr5 136599922 136600463 -63029687 + L1M4c LINE L1 2252 2781 -3601 1795 170 0 0 chr5 136600463 136600734 -63029416 - AluSx SINE Alu -8 304 34 2062 248 18 26 chr5 136600734 136601164 -63028986 + L1M4c LINE L1 2781 3213 -3169 3879 202 15 1 chr5 136604531 136605001 -63025149 + L1 LINE L1 2118 2607 -3539 189 0 0 0 chr5 136605001 136605022 -63025128 + (CAA)n Simple_repeat Simple_repeat 1 21 0 3879 202 15 1 chr5 136605022 136605398 -63024752 + L1 LINE L1 2607 2976 -3170 1693 169 10 0 chr5 136605398 136605688 -63024462 + AluSg SINE Alu 2 294 -16 1237 148 8 38 chr5 136606347 136606584 -63023566 + MSTA LTR MaLR 1 230 -198 299 155 42 0 chr5 136606584 136606655 -63023495 + CT-rich Low_complexity Low_complexity 2 75 0 761 195 49 35 chr5 136606655 136606881 -63023269 + MSTA LTR MaLR 199 427 -1 24 32 0 0 chr5 136607157 136607188 -63022962 + GC_rich Low_complexity Low_complexity 1 31 0 1214 136 0 0 chr5 136607395 136607564 -63022586 + AluSc SINE Alu 120 288 -21 27 29 0 0 chr5 136608487 136608521 -63021629 + AT_rich Low_complexity Low_complexity 1 34 0 26 50 0 0 chr5 136608565 136608605 -63021545 + AT_rich Low_complexity Low_complexity 1 40 0 219 221 10 92 chr5 136608606 136608801 -63021349 + T-rich Low_complexity Low_complexity 2 180 0 2452 74 3 0 chr5 136613285 136613581 -63016569 + AluSp SINE Alu 1 297 -16 31 44 0 0 chr5 136614458 136614503 -63015647 + AT_rich Low_complexity Low_complexity 1 45 0 181 343 88 0 chr5 136617045 136617147 -63013003 - L3b LINE CR1 -37 1546 1436 350 127 32 0 chr5 136617664 136617727 -63012423 - Alu SINE Alu -3 299 235 2482 61 0 0 chr5 136619298 136619591 -63010559 - AluY SINE Alu -18 293 1 183 42 0 0 chr5 136619953 136619977 -63010173 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 403 270 0 0 chr5 136620474 136620574 -63009576 - MIR3 SINE MIR -23 185 86 204 97 0 0 chr5 136620918 136620949 -63009201 + (T)n Simple_repeat Simple_repeat 1 31 0 394 342 126 5 chr5 136621268 136621490 -63008660 - L3 LINE CR1 -73 1504 1256 1493 190 101 46 chr5 136621496 136621932 -63008218 + LTR40b LTR ERVL 1 460 -2 372 327 94 45 chr5 136621944 136622146 -63008004 - L3 LINE CR1 -358 1219 1008 469 256 25 31 chr5 136622162 136622322 -63007828 - L3 LINE CR1 -828 749 591 1815 121 8 0 chr5 136622846 136623103 -63007047 + AluSq SINE Alu 1 259 -54 219 36 0 0 chr5 136623128 136623156 -63006994 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 186 273 91 13 chr5 136623158 136623235 -63006915 + MIR3 SINE MIR 102 184 -24 182 385 26 0 chr5 136623288 136623366 -63006784 - MIR SINE MIR -135 127 48 524 268 142 22 chr5 136623630 136623813 -63006337 + MIR SINE MIR 52 256 -6 199 246 133 42 chr5 136624167 136624273 -63005877 + MIR SINE MIR 34 152 -93 367 254 58 43 chr5 136625228 136625366 -63004784 - L2 LINE L2 0 3313 3174 188 359 38 47 chr5 136625844 136625950 -63004200 + L2 LINE L2 3160 3264 -8 467 296 164 6 chr5 136627107 136627266 -63002884 + MIR3 SINE MIR 21 204 -4 360 43 0 0 chr5 136627939 136627985 -63002165 + (CA)n Simple_repeat Simple_repeat 2 47 0 1379 179 65 13 chr5 136628364 136628672 -63001478 - MER33 DNA MER1_type 0 324 1 252 354 18 35 chr5 136629254 136629367 -63000783 + MIR SINE MIR 52 139 -69 193 293 0 81 chr5 136629345 136629444 -63000706 - MIR SINE MIR 0 262 172 * 1501 205 0 48 chr5 136629772 136630084 -63000066 - AluJo SINE Alu -15 297 1 261 302 129 36 chr5 136630231 136630370 -62999780 - MIR SINE MIR -93 169 18 317 315 0 0 chr5 136630697 136630786 -62999364 - L1MC4 LINE L1 -1339 6703 6615 264 30 0 0 chr5 136630927 136630960 -62999190 + (CA)n Simple_repeat Simple_repeat 2 34 0 630 308 107 0 chr5 136631398 136631632 -62998518 - MIR SINE MIR -3 259 1 2636 109 59 12 chr5 136632291 136632672 -62997478 + MLT2A1 LTR ERVL 2 406 -38 860 0 10 0 chr5 136632672 136632772 -62997378 + (TCTA)n Simple_repeat Simple_repeat 2 102 0 2636 109 59 12 chr5 136632772 136632813 -62997337 + MLT2A1 LTR ERVL 406 444 0 41360 76 8 13 chr5 136632813 136638476 -62991674 + HERVL-A1 LTR ERVL 1 5635 -19 1768 129 35 46 chr5 136638479 136638827 -62991323 + MLT2A1 LTR ERVL 101 444 0 2148 109 0 26 chr5 136639497 136639800 -62990350 + AluY SINE Alu 1 295 -16 332 221 53 18 chr5 136640874 136640987 -62989163 + L1MC5 LINE L1 7718 7834 -127 312 195 0 39 chr5 136641023 136641100 -62989050 + L1MC5 LINE L1 7835 7908 -53 1195 292 75 9 chr5 136641329 136641757 -62988393 - MLT1F1 LTR MaLR -20 547 92 958 233 29 117 chr5 136641804 136642250 -62987900 - MLT1F1-int LTR MaLR 0 1371 965 918 169 84 2 chr5 136642259 136642441 -62987709 - MLT1B LTR MaLR -7 367 187 212 184 20 0 chr5 136642443 136642492 -62987658 + GA-rich Low_complexity Low_complexity 2 51 0 199 289 0 0 chr5 136642728 136642780 -62987370 - L2 LINE L2 0 3313 3262 24 67 0 0 chr5 136642973 136643018 -62987132 + AT_rich Low_complexity Low_complexity 1 45 0 788 348 67 19 chr5 136645549 136645925 -62984225 - L2 LINE L2 0 3272 2879 1041 243 104 33 chr5 136645926 136646263 -62983887 + L1MC4 LINE L1 6729 7089 -953 1453 214 70 20 chr5 136646263 136646665 -62983485 + L1MC4a LINE L1 7158 7579 -229 442 228 80 58 chr5 136646660 136646884 -62983266 + L1MC4 LINE L1 7685 7913 -129 * 24 32 0 0 chr5 136646916 136646947 -62983203 + AT_rich Low_complexity Low_complexity 1 31 0 938 231 103 72 chr5 136647098 136647564 -62982586 - MLT1E2 LTR MaLR 0 467 1 291 333 106 0 chr5 136647717 136647840 -62982310 + L2 LINE L2 3137 3272 0 722 282 116 35 chr5 136648262 136648871 -62981279 - L1ME4a LINE L1 -40 6081 5409 1264 287 81 32 chr5 136649039 136649471 -62980679 + MLT1E LTR MaLR 1 453 -140 28 71 0 0 chr5 136651746 136651802 -62978348 + AT_rich Low_complexity Low_complexity 1 56 0 489 352 56 13 chr5 136652181 136652414 -62977736 + MIR SINE MIR 7 249 -13 228 67 0 0 chr5 136656241 136656271 -62973879 + (CA)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr5 136656605 136656627 -62973523 + AT_rich Low_complexity Low_complexity 1 22 0 235 269 202 25 chr5 136657010 136657129 -62973021 + MLT1K LTR MaLR 82 221 -367 242 305 21 11 chr5 136657404 136657499 -62972651 + MLT1L LTR MaLR 510 605 -10 189 292 101 22 chr5 136657887 136657976 -62972174 + L2 LINE L2 3175 3270 -2 235 261 77 39 chr5 136658185 136658315 -62971835 - LTR67 LTR ERVL -14 543 409 364 279 242 5 chr5 136658380 136658599 -62971551 - L2 LINE L2 -1400 1914 1644 518 281 79 20 chr5 136658678 136658881 -62971269 + L2 LINE L2 3094 3308 -5 212 167 0 0 chr5 136659749 136659791 -62970359 + T-rich Low_complexity Low_complexity 1 42 0 404 231 139 9 chr5 136659896 136660004 -62970146 + L2 LINE L2 3192 3313 0 22 0 0 0 chr5 136660986 136661008 -62969142 + AT_rich Low_complexity Low_complexity 1 22 0 1316 92 0 0 chr5 136661073 136661247 -62968903 - AluY SINE Alu -8 303 130 387 224 0 0 chr5 136662652 136662728 -62967422 + L2 LINE L2 3238 3313 0 2137 125 7 0 chr5 136663168 136663471 -62966679 - AluSx SINE Alu -7 305 1 438 85 0 0 chr5 136663762 136663866 -62966284 + Alu SINE Alu 221 324 0 249 355 32 8 chr5 136664608 136664732 -62965418 - L2 LINE L2 -202 3070 2944 2332 93 10 3 chr5 136665226 136665528 -62964622 + AluSc SINE Alu 1 304 -5 851 247 120 53 chr5 136665596 136666317 -62963833 - L2 LINE L2 0 3313 1607 371 165 55 33 chr5 136667337 136667428 -62962722 + L1MC5 LINE L1 7840 7932 -29 402 280 57 46 chr5 136667531 136667726 -62962424 + MIR3 SINE MIR 2 196 -52 1063 159 48 35 chr5 136667882 136668109 -62962041 - MSTA LTR MaLR 0 428 199 1273 181 26 33 chr5 136668144 136668414 -62961736 - MSTA LTR MaLR -160 268 1 435 198 216 0 chr5 136670847 136670864 -62959286 - L1MA10 LINE L1 -10 6324 6308 2863 225 59 26 chr5 136670864 136671195 -62958955 - L1ME1 LINE L1 -34 6132 5813 2151 142 88 32 chr5 136671195 136671604 -62958546 + MSTB1 LTR MaLR 1 432 0 2863 225 59 26 chr5 136671604 136671910 -62958240 - L1ME1 LINE L1 -353 5813 5519 2391 81 3 0 chr5 136671910 136672207 -62957943 + AluSp SINE Alu 1 298 -15 2863 225 59 26 chr5 136672207 136672643 -62957507 - L1ME1 LINE L1 -647 5519 5021 5754 160 35 10 chr5 136672677 136673344 -62956806 - L1MA6 LINE L1 -9 6291 5642 1609 166 85 18 chr5 136673344 136673627 -62956523 - AluSx SINE Alu -10 302 1 5754 160 35 10 chr5 136673627 136675616 -62954534 - L1MA6 LINE L1 -658 5642 3383 431 302 20 69 chr5 136675623 136675825 -62954325 + LTR16A LTR ERVL 106 297 -153 442 270 82 5 chr5 136676667 136676858 -62953292 - MLT1I LTR MaLR -243 268 18 240 130 0 0 chr5 136676884 136676930 -62953220 + (A)n Simple_repeat Simple_repeat 1 46 0 3991 125 14 8 chr5 136677707 136678370 -62951780 - L1MA3 LINE L1 0 6305 5639 312 294 0 22 chr5 136678373 136678465 -62951685 + L1MC4 LINE L1 6614 6703 -1339 195 129 0 0 chr5 136678465 136678496 -62951654 + (TA)n Simple_repeat Simple_repeat 2 32 0 387 100 117 0 chr5 136678496 136678556 -62951594 - L1M1 LINE L1 -656 5648 5582 1951 133 136 16 chr5 136678556 136678938 -62951212 - MSTA LTR MaLR 0 428 1 9198 176 20 10 chr5 136678943 136680572 -62949578 - MSTA-int LTR MaLR -6 1645 1 2206 128 123 5 chr5 136680572 136680955 -62949195 - MSTA LTR MaLR 0 428 1 6940 153 12 4 chr5 136680955 136682439 -62947711 - L1M1 LINE L1 -719 5586 4093 2345 100 0 0 chr5 136683491 136683800 -62946350 + AluSc SINE Alu 1 309 0 561 185 68 6 chr5 136683828 136683990 -62946160 - Looper DNA T2_type 0 1558 1387 3675 188 61 29 chr5 136683996 136684288 -62945862 - Looper DNA T2_type -598 960 679 1201 203 42 10 chr5 136684288 136684599 -62945551 - MER33 DNA MER1_type -1 323 3 3675 188 61 29 chr5 136684599 136685236 -62944914 - Looper DNA T2_type -879 679 1 24419 167 20 19 chr5 136685450 136686113 -62944037 + L1PA10 LINE L1 618 1279 -5204 2191 102 6 13 chr5 136686113 136686428 -62943722 + AluSp SINE Alu 1 313 0 24419 167 20 19 chr5 136686428 136687824 -62942326 + L1PA10 LINE L1 1279 2672 -3811 2246 124 0 0 chr5 136687824 136688130 -62942020 - AluSx SINE Alu -6 306 1 24419 167 20 19 chr5 136688130 136691936 -62938214 + L1PA10 LINE L1 2672 6472 -11 402 329 44 6 chr5 136692256 136692414 -62937736 - MIR SINE MIR -27 235 72 430 267 166 37 chr5 136692433 136692729 -62937421 - LTR67 LTR ERVL 0 557 224 264 268 0 0 chr5 136692778 136692849 -62937301 - MST-int LTR MaLR -1394 257 187 40749 35 21 1 chr5 136692860 136698880 -62931270 - L1PA2 LINE L1 -6 6149 6 560 301 55 11 chr5 136698891 136699074 -62931076 - LTR67 LTR ERVL -364 193 3 217 235 20 0 chr5 136699095 136699146 -62931004 - MIR SINE MIR -102 160 109 32 0 0 0 chr5 136699519 136699551 -62930599 + AT_rich Low_complexity Low_complexity 1 32 0 1715 175 0 7 chr5 136700004 136700290 -62929860 - AluJb SINE Alu -28 284 1 444 286 8 32 chr5 136700965 136701091 -62929059 + L2 LINE L2 3150 3272 0 855 269 110 32 chr5 136701889 136702362 -62927788 + LTR33 LTR ERVL 12 521 0 278 306 14 0 chr5 136702364 136702436 -62927714 - MIR SINE MIR -62 146 74 2503 54 0 13 chr5 136702736 136703050 -62927100 + AluY SINE Alu 1 310 -1 216 224 184 0 chr5 136703724 136703800 -62926350 - MIR SINE MIR -3 259 170 221 171 0 0 chr5 136705993 136706034 -62924116 + T-rich Low_complexity Low_complexity 1 41 0 40823 34 21 2 chr5 136706035 136712062 -62918088 - L1PA3 LINE L1 -3 6152 5 2023 114 37 0 chr5 136712344 136712642 -62917508 + AluSq SINE Alu 3 311 -2 366 23 0 0 chr5 136713399 136713442 -62916708 + (CA)n Simple_repeat Simple_repeat 2 44 0 2124 77 0 4 chr5 136714806 136715078 -62915072 + AluY SINE Alu 28 298 -13 3168 152 32 84 chr5 136715125 136715854 -62914296 - LTR8 LTR ERV1 0 691 1 288 0 0 0 chr5 136716696 136716728 -62913422 + (CA)n Simple_repeat Simple_repeat 2 33 0 240 35 0 0 chr5 136716750 136716779 -62913371 + (TG)n Simple_repeat Simple_repeat 2 30 0 367 279 61 41 chr5 136718001 136718148 -62912002 + MIR SINE MIR 46 195 -67 1863 181 5 40 chr5 136718179 136718554 -62911596 + MLT1A1 LTR MaLR 4 365 0 775 184 12 0 chr5 136719013 136719176 -62910974 - HSMAR2 DNA Mariner -1 1301 1137 202 286 0 0 chr5 136719425 136719467 -62910683 - MER5A DNA MER1_type -99 90 49 374 70 0 18 chr5 136719547 136719604 -62910546 + AluY SINE Alu 89 144 -157 630 77 33 0 chr5 136719604 136719695 -62910455 + AluSg/x SINE Alu 215 308 -1 727 255 10 26 chr5 136720181 136720373 -62909777 - L2 LINE L2 0 3313 3125 201 234 0 0 chr5 136720492 136720539 -62909611 + (TG)n Simple_repeat Simple_repeat 2 48 0 255 279 0 0 chr5 136721851 136721912 -62908238 - L2 LINE L2 -2 3311 3251 699 313 149 35 chr5 136722006 136722642 -62907508 + L2 LINE L2 2148 2856 -458 184 345 84 35 chr5 136722855 136722997 -62907153 + L2 LINE L2 3007 3155 -117 212 353 163 8 chr5 136723130 136723388 -62906762 - L2 LINE L2 -569 2745 2448 1452 122 22 0 chr5 136723600 136723822 -62906328 + MER30 DNA MER1_type 3 229 -1 1499 197 74 21 chr5 136724118 136724550 -62905600 + Charlie1b DNA MER1_type 69 523 0 225 0 0 0 chr5 136725573 136725598 -62904552 + (A)n Simple_repeat Simple_repeat 1 25 0 2650 154 13 25 chr5 136726810 136726935 -62903215 + MLT1C LTR MaLR 1 126 -341 2468 82 0 0 chr5 136726935 136727240 -62902910 + AluSg SINE Alu 1 305 -5 2650 154 13 25 chr5 136727240 136727587 -62902563 + MLT1C LTR MaLR 126 467 0 1271 308 117 10 chr5 136728174 136728369 -62901781 - L2 LINE L2 -809 2505 2332 294 29 0 0 chr5 136728369 136728404 -62901746 + (TG)n Simple_repeat Simple_repeat 2 36 0 1271 308 117 10 chr5 136728404 136728824 -62901326 - L2 LINE L2 -982 2332 1824 210 229 0 0 chr5 136728880 136728950 -62901200 + GA-rich Low_complexity Low_complexity 1 70 0 420 262 74 7 chr5 136729040 136729189 -62900961 - FRAM SINE Alu -17 159 1 303 249 32 108 chr5 136730107 136730292 -62899858 + MLT1K LTR MaLR 345 515 -73 392 264 80 80 chr5 136730332 136730631 -62899519 - L2 LINE L2 -1508 1806 1508 416 299 82 29 chr5 136730636 136730693 -62899457 - MLT1L LTR MaLR -4 611 558 1899 174 27 0 chr5 136730693 136731027 -62899123 - MER61A LTR ERV1 0 343 1 416 299 82 29 chr5 136731027 136731118 -62899032 - MLT1L LTR MaLR -57 558 473 1979 138 7 26 chr5 136731118 136731423 -62898727 + AluSx SINE Alu 1 299 -13 416 299 82 29 chr5 136731423 136731517 -62898633 - MLT1L LTR MaLR -142 473 355 3578 111 5 11 chr5 136731852 136732413 -62897737 + THE1B-int LTR MaLR 1023 1580 0 2263 149 5 24 chr5 136732413 136732782 -62897368 + THE1B LTR MaLR 1 362 -2 3335 254 59 7 chr5 136732784 136732824 -62897326 - L1M4 LINE L1 -1839 4307 4271 189 0 0 0 chr5 136732824 136732845 -62897305 + (TG)n Simple_repeat Simple_repeat 2 22 0 3335 254 59 7 chr5 136732845 136733564 -62896586 - L1M4 LINE L1 -1875 4271 3467 222 37 0 0 chr5 136733564 136733591 -62896559 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 3335 254 59 7 chr5 136733591 136733972 -62896178 - L1M4 LINE L1 -2679 3467 3107 254 203 0 0 chr5 136733973 136734032 -62896118 - L1M4 LINE L1 -3093 3053 2995 212 211 19 0 chr5 136734052 136734104 -62896046 + (TA)n Simple_repeat Simple_repeat 2 54 0 2351 90 0 0 chr5 136734121 136734411 -62895739 - AluY SINE Alu -21 290 1 2551 99 10 10 chr5 136734552 136734935 -62895215 - L1PB1 LINE L1 -2 6149 5767 230 175 0 35 chr5 136734935 136734992 -62895158 + (CATA)n Simple_repeat Simple_repeat 2 56 0 3580 157 0 15 chr5 136734992 136736000 -62894150 - L1PB1 LINE L1 -360 5791 4801 430 331 15 74 chr5 136736175 136736513 -62893637 - L2 LINE L2 -1842 1472 1155 4067 212 26 8 chr5 136736556 136738351 -62891799 - L1MB5 LINE L1 0 6174 4343 3046 188 7 9 chr5 136738351 136738910 -62891240 + MER74A LTR ERVL 1 558 0 4067 212 26 8 chr5 136738910 136738952 -62891198 - L1MB5 LINE L1 -1831 4343 4303 2584 112 6 8 chr5 136738952 136739317 -62890833 + THE1B LTR MaLR 1 364 0 6142 116 15 3 chr5 136739317 136740245 -62889905 + THE1B-int LTR MaLR 1 939 -641 386 272 24 47 chr5 136790297 136790466 -62839684 - L1MC4a LINE L1 -1523 6285 6121 2153 258 38 35 chr5 136790648 136790701 -62839449 - L1MC4a LINE L1 -750 5396 5345 1510 162 50 34 chr5 136790701 136790998 -62839152 - AluJb SINE Alu -8 304 3 2153 258 38 35 chr5 136790998 136791694 -62838456 - L1MC4a LINE L1 -801 5345 5119 3389 74 0 4 chr5 136791694 136792151 -62837999 - L1PA13 LINE L1 -3 6160 5706 2153 258 38 35 chr5 136792151 136792487 -62837663 - L1MC4a LINE L1 -1027 5119 4785 988 256 90 3 chr5 136792493 136792814 -62837336 - L2 LINE L2 -772 2542 2194 212 333 144 0 chr5 136792836 136792926 -62837224 - MIR SINE MIR -112 150 48 1691 193 32 11 chr5 136792937 136793311 -62836839 - MLT1B LTR MaLR 0 390 9 1845 217 99 44 chr5 136793358 136793883 -62836267 - MLT2B3 LTR ERVL 0 554 1 1315 151 22 119 chr5 136793954 136794272 -62835878 + AluJo SINE Alu 1 287 -25 5558 162 32 4 chr5 136794284 136795780 -62834370 + L1MA9 LINE L1 4763 6307 -5 800 236 76 17 chr5 136795783 136796020 -62834130 + L1MB7 LINE L1 5814 6064 -120 276 234 43 11 chr5 136795993 136796087 -62834063 + L1MB8 LINE L1 6066 6162 -16 * 268 79 0 0 chr5 136796123 136796161 -62833989 + L1MB8 LINE L1 5728 5765 -419 768 119 24 0 chr5 136796178 136796304 -62833846 + L1MB8 LINE L1 6041 6169 -9 185 246 0 72 chr5 136796326 136796395 -62833755 + L2 LINE L2 2702 2765 -549 1796 151 9 69 chr5 136796397 136796809 -62833341 - AluJo SINE Alu 0 392 1 2799 170 199 121 chr5 136796809 136797312 -62832838 + L1MD3 LINE L1 6737 7199 -796 495 229 8 53 chr5 136797312 136797443 -62832707 + MLT1F1 LTR MaLR 1 125 -442 2799 170 199 121 chr5 136797443 136797977 -62832173 + L1MD3 LINE L1 7199 7995 0 751 305 67 19 chr5 136797999 136798414 -62831736 + L2 LINE L2 2757 3186 -127 1561 185 75 81 chr5 136798416 136798924 -62831226 + MLT1D LTR MaLR 1 505 0 996 179 0 6 chr5 136799215 136799383 -62830767 - FRAM SINE Alu -10 166 1 318 277 27 34 chr5 136799983 136800136 -62830014 - MLT1K LTR MaLR 0 615 435 1160 220 5 0 chr5 136800356 136800579 -62829571 + MER58A DNA MER1_type 1 224 0 466 297 118 33 chr5 136800850 136801062 -62829088 - MIR SINE MIR -21 241 12 732 187 90 12 chr5 136801236 136801402 -62828748 + L1PB4 LINE L1 5970 6148 -8 239 300 100 0 chr5 136801597 136801727 -62828423 - MER103 DNA DNA -22 144 2 330 187 40 27 chr5 136802690 136802765 -62827385 + MER21B LTR ERV1 158 233 -630 1733 219 160 64 chr5 136803021 136803741 -62826409 - MER21B LTR ERV1 -52 811 23 69 78 0 0 chr5 136805734 136805887 -62824263 + AT_rich Low_complexity Low_complexity 1 153 0 208 369 90 9 chr5 136805968 136806079 -62824071 - MIR3 SINE MIR -25 183 64 449 252 37 37 chr5 136806081 136806216 -62823934 - L2 LINE L2 -19 3294 3160 28 38 0 19 chr5 136807033 136807061 -62823089 + AT_rich Low_complexity Low_complexity 1 29 -23 2278 108 3 0 chr5 136807061 136807367 -62822783 + AluSp SINE Alu 1 307 -6 28 38 0 19 chr5 136807367 136807391 -62822759 + AT_rich Low_complexity Low_complexity 29 52 0 2219 138 0 0 chr5 136807595 136807907 -62822243 - AluSx SINE Alu 0 312 1 2340 93 3 3 chr5 136808930 136809242 -62820908 + AluSp SINE Alu 1 312 -1 21 0 0 0 chr5 136809287 136809308 -62820842 + AT_rich Low_complexity Low_complexity 1 21 0 244 280 0 27 chr5 136809438 136809513 -62820637 + MIR SINE MIR 189 261 -1 828 281 45 16 chr5 136813934 136814303 -62815847 - LTR16A LTR ERVL 0 457 73 721 262 202 17 chr5 136814441 136814911 -62815239 - MLT1G LTR MaLR 0 590 34 321 140 0 0 chr5 136815122 136815179 -62814971 + (CA)n Simple_repeat Simple_repeat 1 57 0 511 302 103 57 chr5 136816825 136817331 -62812819 + L2 LINE L2 2241 2769 -545 474 194 72 19 chr5 136817331 136817570 -62812580 + MER33 DNA MER1_type 1 304 -20 402 57 0 0 chr5 136817730 136817783 -62812367 + (TG)n Simple_repeat Simple_repeat 2 54 0 655 101 25 42 chr5 136819001 136819120 -62811030 + L1MA3 LINE L1 6189 6305 0 267 122 0 0 chr5 136819887 136819936 -62810214 + (T)n Simple_repeat Simple_repeat 1 49 0 397 261 58 0 chr5 136819962 136820100 -62810050 + MLT1I LTR MaLR 18 163 -246 368 302 20 69 chr5 136820998 136821200 -62808950 - LTR16A LTR ERVL -153 297 106 5478 158 35 10 chr5 136821207 136823196 -62806954 + L1MA6 LINE L1 3383 5642 -658 1646 166 85 18 chr5 136823196 136823479 -62806671 + AluSx SINE Alu 1 302 -10 5478 158 35 10 chr5 136823479 136824146 -62806004 + L1MA6 LINE L1 5642 6291 -9 2659 220 79 24 chr5 136824180 136824617 -62805533 + L1ME1 LINE L1 5021 5432 -902 2408 78 3 0 chr5 136824617 136824913 -62805237 - AluSp SINE Alu -16 297 1 2659 220 79 24 chr5 136824913 136825219 -62804931 + L1ME1 LINE L1 5432 5720 -614 2156 142 88 32 chr5 136825219 136825628 -62804522 - MSTB1 LTR MaLR 0 432 1 2659 220 79 24 chr5 136825628 136825976 -62804174 + L1ME1 LINE L1 5720 6324 -10 193 119 48 0 chr5 136827910 136827952 -62802198 + CT-rich Low_complexity Low_complexity 2 45 0 981 150 48 40 chr5 136827952 136828179 -62801971 + MSTA LTR MaLR 200 428 0 401 280 57 46 chr5 136828335 136828530 -62801620 - MIR3 SINE MIR -52 156 2 345 165 55 33 chr5 136828633 136828724 -62801426 - L1MC5 LINE L1 -29 7932 7840 844 247 120 53 chr5 136829748 136830469 -62799681 + L2 LINE L2 1607 3313 0 2352 93 10 3 chr5 136830537 136830838 -62799312 - AluSc SINE Alu -6 303 1 255 355 32 8 chr5 136831332 136831456 -62798694 + L2 LINE L2 2944 3070 -202 446 85 0 0 chr5 136832198 136832306 -62797844 - Alu SINE Alu 0 327 220 2227 122 3 0 chr5 136832597 136832901 -62797249 + AluSx SINE Alu 1 305 -7 389 224 0 0 chr5 136833341 136833417 -62796733 - L2 LINE L2 0 3313 3238 1314 92 0 0 chr5 136834822 136834996 -62795154 + AluY SINE Alu 130 303 -8 377 220 150 10 chr5 136836067 136836167 -62793983 - L2 LINE L2 -8 3305 3192 203 171 0 0 chr5 136836272 136836313 -62793837 + A-rich Low_complexity Low_complexity 1 41 0 517 286 63 19 chr5 136837181 136837471 -62792679 - L2 LINE L2 -5 3308 2952 376 283 242 5 chr5 136837463 136837682 -62792468 + L2 LINE L2 1644 1914 -1400 * 187 292 101 22 chr5 136838086 136838175 -62791975 - L2 LINE L2 -2 3270 3175 228 250 192 25 chr5 136838933 136839053 -62791097 - MLT1K LTR MaLR -367 221 82 22 0 0 0 chr5 136839436 136839458 -62790692 + AT_rich Low_complexity Low_complexity 1 22 0 246 62 0 0 chr5 136839792 136839824 -62790326 + (TG)n Simple_repeat Simple_repeat 1 32 0 24 67 0 0 chr5 136845070 136845115 -62785035 + AT_rich Low_complexity Low_complexity 1 45 0 197 289 0 0 chr5 136845308 136845360 -62784790 + L2 LINE L2 3262 3313 0 212 184 20 0 chr5 136845596 136845645 -62784505 + CT-rich Low_complexity Low_complexity 2 51 0 859 162 83 8 chr5 136845647 136845830 -62784320 + MLT1B LTR MaLR 187 367 -7 803 235 29 117 chr5 136845839 136846285 -62783865 + MLT1F1-int LTR MaLR 965 1371 0 1068 290 75 9 chr5 136846332 136846760 -62783390 + MLT1F1 LTR MaLR 92 547 -20 287 206 0 15 chr5 136846998 136847066 -62783084 - L1MC5 LINE L1 -60 7901 7835 306 221 53 18 chr5 136847102 136847215 -62782935 - L1MC5 LINE L1 -127 7834 7718 2195 102 0 30 chr5 136848289 136848593 -62781557 - AluY SINE Alu -16 295 1 21 0 0 0 chr5 136849092 136849113 -62781037 + AT_rich Low_complexity Low_complexity 1 21 0 1768 129 35 46 chr5 136849265 136849613 -62780537 - MLT2A1 LTR ERVL 0 444 101 41343 76 8 13 chr5 136849616 136855278 -62774872 - HERVL-A1-A1 LTR ERVL -19 5635 1 2659 106 59 12 chr5 136855278 136855319 -62774831 - MLT2A1 LTR ERVL 0 444 406 608 0 14 0 chr5 136855319 136855391 -62774759 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 2659 106 59 12 chr5 136855391 136855772 -62774378 - MLT2A1 LTR ERVL -38 406 2 188 359 38 47 chr5 136857279 136857385 -62772765 - L2 LINE L2 -8 3264 3160 352 261 58 43 chr5 136857858 136857996 -62772154 + L2 LINE L2 3174 3313 0 199 246 133 42 chr5 136858951 136859057 -62771093 - MIR SINE MIR -93 115 34 524 268 142 22 chr5 136859411 136859594 -62770556 - MIR SINE MIR -6 256 52 182 385 26 0 chr5 136859858 136859936 -62770214 + MIR SINE MIR 48 127 -135 186 273 91 13 chr5 136859989 136860066 -62770084 - MIR3 SINE MIR -24 184 102 219 36 0 0 chr5 136860068 136860096 -62770054 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1815 121 8 0 chr5 136860121 136860378 -62769772 - AluSq SINE Alu -54 259 1 469 256 25 31 chr5 136860902 136861062 -62769088 + L3 LINE CR1 591 749 -828 391 322 94 45 chr5 136861078 136861280 -62768870 + L3 LINE CR1 1008 1219 -358 1479 192 101 48 chr5 136861292 136861729 -62768421 - LTR40b LTR ERVL -2 460 1 393 342 116 9 chr5 136861735 136861960 -62768190 + L3 LINE CR1 1256 1504 -73 222 91 0 0 chr5 136862279 136862312 -62767838 + (A)n Simple_repeat Simple_repeat 1 33 0 403 270 0 0 chr5 136862656 136862756 -62767394 + MIR3 SINE MIR 86 185 -23 183 42 0 0 chr5 136863253 136863277 -62766873 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 2472 62 0 0 chr5 136863640 136863932 -62766218 + AluY SINE Alu 1 292 -19 350 127 32 0 chr5 136865503 136865566 -62764584 + Alu SINE Alu 235 299 -3 31 44 0 0 chr5 136868728 136868773 -62761377 + AT_rich Low_complexity Low_complexity 1 45 0 2452 74 3 0 chr5 136869650 136869946 -62760204 - AluSp SINE Alu -16 297 1 346 284 12 0 chr5 136877343 136877424 -62752726 - L3b LINE CR1 -88 1495 1414 186 279 12 23 chr5 136877739 136877825 -62752325 - L3b LINE CR1 -385 1198 1114 244 158 0 0 chr5 136878467 136878505 -62751645 - MER91 DNA MER1_type -18 122 85 333 251 31 68 chr5 136878586 136878777 -62751373 + L2 LINE L2 1807 1990 -1324 188 287 32 75 chr5 136879568 136879662 -62750488 - MER5A DNA MER1_type -93 96 7 200 139 0 47 chr5 136879863 136879906 -62750244 + (TTCC)n Simple_repeat Simple_repeat 1 41 0 305 345 54 35 chr5 136880223 136880484 -62749666 + HAL1 LINE L1 2221 2486 -21 195 170 0 0 chr5 136880867 136880914 -62749236 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 5779 165 47 25 chr5 136882228 136882309 -62747841 - L1M LINE L1 -743 5403 5325 1486 51 0 0 chr5 136882309 136882487 -62747663 - L1PA3 LINE L1 -11 6144 5967 5779 165 47 25 chr5 136882487 136883713 -62746437 - L1M LINE L1 -821 5325 4077 3053 165 0 0 chr5 136883723 136884256 -62745894 + L1MA4 LINE L1 5488 6020 -280 401 279 89 69 chr5 136884763 136884836 -62745314 - MLT1I LTR MaLR 0 409 339 2103 137 0 0 chr5 136884836 136885128 -62745022 - AluSx SINE Alu -20 292 1 401 279 89 69 chr5 136885128 136885301 -62744849 - MLT1I LTR MaLR -70 339 158 182 380 13 0 chr5 136885913 136885992 -62744158 - MIR SINE MIR -105 157 78 264 184 172 11 chr5 136886004 136886091 -62744059 + MER4D LTR ERV1 729 829 -74 189 254 109 18 chr5 136887539 136887594 -62742556 + MIR SINE MIR 86 145 -63 422 176 37 46 chr5 136889047 136889155 -62740995 + MIR SINE MIR 131 237 -25 565 320 66 22 chr5 136889394 136889622 -62740528 - MIR SINE MIR -14 248 11 186 133 0 0 chr5 136890076 136890106 -62740044 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 1783 147 40 0 chr5 136890192 136890497 -62739653 + AluSx SINE Alu 1 316 0 1060 227 90 4 chr5 136891114 136891391 -62738759 - MER58B DNA MER1_type 0 341 41 460 0 16 16 chr5 136892937 136892998 -62737152 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 1603 159 75 29 chr5 136893590 136893935 -62736215 + MER46B DNA MER2_type 1 236 0 26 30 0 0 chr5 136895153 136895186 -62734964 + AT_rich Low_complexity Low_complexity 1 33 0 2258 114 0 0 chr5 136895211 136895519 -62734631 - AluY SINE Alu -3 308 1 189 158 79 0 chr5 136896226 136896264 -62733886 + L3 LINE CR1 761 801 -776 570 124 22 22 chr5 136897158 136897336 -62732814 + (CA)n Simple_repeat Simple_repeat 2 179 0 463 160 32 0 chr5 136897359 136897515 -62732635 + (CA)n Simple_repeat Simple_repeat 1 161 0 21 0 0 0 chr5 136898816 136898837 -62731313 + AT_rich Low_complexity Low_complexity 1 21 0 1934 247 212 20 chr5 136899548 136900586 -62729564 - HAL1 LINE L1 -648 1859 623 693 291 97 0 chr5 136901922 136902159 -62727991 - MIR SINE MIR -2 260 1 2052 241 52 50 chr5 136902186 136902904 -62727246 + MER72 LTR ERV1 4 722 0 2136 214 40 27 chr5 136903082 136903609 -62726541 - MLT1F LTR MaLR -4 538 5 2124 128 127 81 chr5 136903828 136904397 -62725753 + LTR49 LTR ERV1 1 595 0 306 0 0 0 chr5 136904496 136904530 -62725620 + (TG)n Simple_repeat Simple_repeat 1 34 0 2075 119 35 54 chr5 136904535 136904906 -62725244 + THE1B LTR MaLR 1 364 0 1479 161 79 4 chr5 136905987 136906241 -62723909 + AluJb SINE Alu 1 273 -39 36 0 0 0 chr5 136906241 136906277 -62723873 + AT_rich Low_complexity Low_complexity 1 36 0 472 141 22 4 chr5 136906703 136906834 -62723316 - MER53 DNA DNA -3 186 1 1780 129 58 41 chr5 136907987 136908351 -62721799 - THE1C LTR MaLR -5 370 1 1325 222 52 0 chr5 136908461 136908632 -62721518 - AluJo SINE Alu -9 303 110 276 53 0 0 chr5 136908632 136908670 -62721480 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 1325 222 52 0 chr5 136908670 136908786 -62721364 - AluJo SINE Alu -202 110 1 870 83 0 0 chr5 136908939 136909059 -62721091 + (TA)n Simple_repeat Simple_repeat 1 120 0 1955 35 0 0 chr5 136909059 136909289 -62720861 - L1PA5 LINE L1 -13 6141 5912 2121 137 0 7 chr5 136910346 136910652 -62719498 - AluSx SINE Alu -8 304 1 1845 217 99 44 chr5 136910723 136911248 -62718902 + MLT2B3 LTR ERVL 1 554 0 1691 193 32 11 chr5 136911295 136911669 -62718481 + MLT1B LTR MaLR 9 390 0 212 333 144 0 chr5 136911680 136911770 -62718380 + MIR SINE MIR 48 150 -112 988 256 90 3 chr5 136911792 136912113 -62718037 + L2 LINE L2 2194 2542 -772 1942 273 82 32 chr5 136912119 136912454 -62717696 + L1MC4a LINE L1 4785 5102 -1044 3417 72 0 4 chr5 136912454 136912911 -62717239 + L1PA13 LINE L1 5706 6160 -3 1942 273 82 32 chr5 136912911 136913605 -62716545 + L1MC4a LINE L1 5102 5017 -1129 1562 164 50 33 chr5 136913605 136913904 -62716246 + AluJb SINE Alu 1 304 -8 1942 273 82 32 chr5 136913904 136914306 -62715844 + L1MC4a LINE L1 5016 5396 -750 288 214 12 0 chr5 136914348 136914432 -62715718 - MER53 DNA DNA -8 181 97 268 263 202 66 chr5 136914445 136914643 -62715507 + L2 LINE L2 2835 3059 -254 586 173 73 86 chr5 136916262 136916482 -62713668 - MER112 DNA MER1_type -43 217 1 2903 6 0 0 chr5 136916788 136917103 -62713047 + AluYb8 SINE Alu 1 315 -3 1903 216 25 41 chr5 136918321 136918834 -62711316 + MLT1D LTR MaLR 1 505 0 402 57 0 0 chr5 136920556 136920609 -62709541 + (CA)n Simple_repeat Simple_repeat 2 54 0 474 194 72 19 chr5 136920769 136921008 -62709142 - MER33 DNA MER1_type -20 304 1 527 304 105 56 chr5 136921008 136921512 -62708638 - L2 LINE L2 -545 2769 2241 321 140 0 0 chr5 136923158 136923215 -62706935 + (TG)n Simple_repeat Simple_repeat 1 57 0 721 262 202 17 chr5 136923426 136923896 -62706254 + MLT1G LTR MaLR 34 590 0 828 281 45 16 chr5 136924034 136924403 -62705747 + LTR16A LTR ERVL 73 457 0 244 280 0 27 chr5 136928825 136928900 -62701250 - MIR SINE MIR -1 261 189 21 0 0 0 chr5 136929030 136929051 -62701099 + AT_rich Low_complexity Low_complexity 1 21 0 2340 93 3 3 chr5 136929096 136929408 -62700742 - AluSp SINE Alu -1 312 1 2219 138 0 0 chr5 136930431 136930743 -62699407 + AluSx SINE Alu 1 312 0 28 38 0 19 chr5 136930947 136930971 -62699179 + AT_rich Low_complexity Low_complexity 1 24 -28 2278 108 3 0 chr5 136930971 136931277 -62698873 - AluSp SINE Alu -6 307 1 28 38 0 19 chr5 136931277 136931305 -62698845 + AT_rich Low_complexity Low_complexity 24 52 0 449 252 37 37 chr5 136932122 136932257 -62697893 + L2 LINE L2 3160 3294 -19 208 369 90 9 chr5 136932259 136932370 -62697780 + MIR3 SINE MIR 64 183 -25 69 78 0 0 chr5 136932451 136932604 -62697546 + AT_rich Low_complexity Low_complexity 1 153 0 1733 219 160 64 chr5 136934597 136935317 -62694833 + MER21B LTR ERV1 23 811 -52 330 187 40 27 chr5 136935573 136935648 -62694502 - MER21B LTR ERV1 -630 233 158 239 300 100 0 chr5 136936611 136936741 -62693409 + MER103 DNA DNA 2 144 -22 732 187 90 12 chr5 136936936 136937102 -62693048 - L1PB4 LINE L1 -8 6148 5970 466 297 118 33 chr5 136937276 136937488 -62692662 + MIR SINE MIR 12 241 -21 1160 220 5 0 chr5 136937759 136937982 -62692168 - MER58A DNA MER1_type 0 224 1 318 277 27 34 chr5 136938202 136938355 -62691795 + MLT1K LTR MaLR 435 615 0 996 179 0 6 chr5 136938955 136939123 -62691027 + FRAM SINE Alu 1 166 -10 1561 185 75 81 chr5 136939414 136939922 -62690228 - MLT1D LTR MaLR 0 505 1 751 305 67 19 chr5 136939924 136940339 -62689811 - L2 LINE L2 -127 3186 2757 2799 170 199 121 chr5 136940361 136940895 -62689255 - L1MD3 LINE L1 0 7995 7504 493 229 8 53 chr5 136940895 136941026 -62689124 - MLT1F1 LTR MaLR -442 125 1 2799 170 199 121 chr5 136941026 136941529 -62688621 - L1MD3 LINE L1 -491 7504 6737 1797 151 9 69 chr5 136941529 136941941 -62688209 + AluJo SINE Alu 1 392 0 185 246 0 72 chr5 136941943 136942012 -62688138 - L2 LINE L2 -549 2765 2702 768 119 24 0 chr5 136942034 136942160 -62687990 - L1MB8 LINE L1 -9 6169 6041 268 79 0 0 chr5 136942177 136942215 -62687935 - L1MB8 LINE L1 -413 5765 5728 276 234 43 11 chr5 136942251 136942345 -62687805 - L1MB8 LINE L1 -16 6162 6066 * 800 236 76 17 chr5 136942318 136942555 -62687595 - L1MB7 LINE L1 -120 6064 5814 5565 161 32 4 chr5 136942558 136944054 -62686096 - L1MA9 LINE L1 -5 6371 4827 974 150 28 142 chr5 136944066 136944320 -62685830 - AluJo SINE Alu -25 287 63 10226 214 49 35 chr5 136944320 136944813 -62685337 - L1MA9 LINE L1 -1372 4838 4353 1508 157 105 21 chr5 136944813 136945099 -62685051 - AluSg SINE Alu 0 310 1 10226 214 49 35 chr5 136945099 136947552 -62682598 - L1MA9 LINE L1 -1857 4353 1936 2273 68 0 4 chr5 136947552 136947861 -62682289 - AluY SINE Alu 0 308 1 10226 214 49 35 chr5 136947861 136948769 -62681381 - L1MA9 LINE L1 -4274 1936 1042 635 228 0 8 chr5 136948769 136948892 -62681258 - FLAM_A SINE Alu -11 122 1 10226 214 49 35 chr5 136948892 136949006 -62681144 - L1MA9 LINE L1 -5168 1042 931 1391 243 7 0 chr5 136949006 136949286 -62680864 + AluJo SINE Alu 1 282 -30 10226 214 49 35 chr5 136949286 136949756 -62680394 - L1MA9 LINE L1 -5279 931 661 340 197 0 56 chr5 136949760 136949831 -62680319 - AluSp SINE Alu -117 186 120 526 120 98 0 chr5 136949831 136949923 -62680227 - L1M3c LINE L1 -4884 1257 1157 2114 260 9 7 chr5 136949993 136950545 -62679605 - L1MA9 LINE L1 -5548 593 2 226 253 40 13 chr5 136950722 136950797 -62679353 - L2 LINE L2 0 3272 3196 273 324 167 0 chr5 136950941 136951043 -62679107 + MIR SINE MIR 17 135 -127 537 267 51 6 chr5 136951113 136951289 -62678861 + MLT1J2 LTR MaLR 36 219 -231 1061 137 120 0 chr5 136953074 136953257 -62676893 - LTR12 LTR ERV1 -133 581 377 287 260 41 16 chr5 136953258 136953381 -62676769 - LTR30 LTR ERV1 -80 642 517 5174 129 173 33 chr5 136953381 136954485 -62675665 - pTR5 LTR ERV1 -439 1999 741 334 290 0 19 chr5 136954848 136954955 -62675195 + CT-rich Low_complexity Low_complexity 4 108 0 186 274 178 0 chr5 136954979 136955052 -62675098 - MIR SINE MIR -6 256 171 231 188 0 0 chr5 136955352 136955400 -62674750 + CT-rich Low_complexity Low_complexity 2 49 0 453 300 94 6 chr5 136955843 136956013 -62674137 - MIR SINE MIR -75 187 3 1169 148 30 9 chr5 136956277 136956501 -62673649 - MER83B LTR ERV1 -48 330 138 201 182 0 23 chr5 136956741 136956785 -62673365 - MIR SINE MIR -34 228 186 2225 188 142 45 chr5 136956839 136957556 -62672594 - LTR48 LTR ERV1 0 787 1 287 277 146 0 chr5 136957892 136958022 -62672128 + MIR SINE MIR 90 238 -24 205 337 51 10 chr5 136958060 136958158 -62671992 + MIR SINE MIR 79 180 -82 397 177 16 0 chr5 136959755 136959817 -62670333 - MER2 DNA MER2_type -282 63 1 710 272 44 18 chr5 136961132 136961360 -62668790 + MER102b DNA MER1_type 103 336 -5 321 348 70 6 chr5 136962218 136962376 -62667774 - MIR SINE MIR -48 214 47 24 32 0 0 chr5 136962536 136962567 -62667583 + AT_rich Low_complexity Low_complexity 1 31 0 222 372 33 0 chr5 136962623 136962744 -62667406 - L2 LINE L2 -1 3312 3188 1297 138 5 33 chr5 136963820 136964030 -62666120 + AluJo SINE Alu 85 288 -24 240 247 118 48 chr5 136964095 136964281 -62665869 + L1ME3 LINE L1 678 876 -5194 339 318 109 5 chr5 136964285 136964486 -62665664 + L1ME3 LINE L1 927 1148 -5113 428 304 61 29 chr5 136964520 136964647 -62665503 + L1ME3 LINE L1 1293 1415 -4846 2228 96 3 3 chr5 136964647 136964940 -62665210 + AluSq SINE Alu 1 293 -20 428 304 61 29 chr5 136964940 136965190 -62664960 + L1ME3 LINE L1 1415 1682 -4579 1456 250 125 43 chr5 136965323 136966349 -62663801 + L1ME3 LINE L1 4825 5931 -165 21 0 0 0 chr5 136966516 136966537 -62663613 + AT_rich Low_complexity Low_complexity 1 21 0 279 313 97 15 chr5 136966903 136967037 -62663113 + MIR SINE MIR 8 152 -110 28 0 0 0 chr5 136967138 136967166 -62662984 + AT_rich Low_complexity Low_complexity 1 28 0 3670 134 49 65 chr5 136967594 136968390 -62661760 + L1MC1 LINE L1 5551 6333 0 24 32 0 0 chr5 136970703 136970734 -62659416 + AT_rich Low_complexity Low_complexity 1 31 0 594 230 149 6 chr5 136973041 136973202 -62656948 - MER5A DNA MER1_type -2 187 4 334 204 41 31 chr5 136973541 136973639 -62656511 - L1ME4a LINE L1 -58 6063 5965 1219 189 23 0 chr5 136973862 136974079 -62656071 - MER58A DNA MER1_type 0 224 3 241 337 42 12 chr5 136974261 136974427 -62655723 - L1M4 LINE L1 -2259 3887 3717 309 263 0 0 chr5 136974622 136974702 -62655448 + MER116 DNA Mariner 1 80 0 729 255 66 43 chr5 136977499 136977951 -62652199 + L1MDb LINE L1 1214 1714 -4873 * 6382 28 12 0 chr5 136977947 136978701 -62651449 - L1PA3 LINE L1 0 6155 5393 33895 37 1 4 chr5 136978707 136982838 -62647312 + L1P LINE L1 3 4122 -2024 1429 48 5 0 chr5 136982823 136983012 -62647138 + L1P LINE L1 5182 5371 -775 * 808 240 52 34 chr5 136983012 136983279 -62646871 + L1MDb LINE L1 1703 1974 -4613 214 292 62 62 chr5 136984351 136984481 -62645669 - MIR SINE MIR -75 187 58 403 268 83 43 chr5 136984907 136985161 -62644989 - L1M4 LINE L1 -1720 4426 4163 291 337 31 0 chr5 136985629 136985727 -62644423 + L2 LINE L2 3192 3292 -21 216 239 113 0 chr5 136987989 136988060 -62642090 + MIR SINE MIR 183 261 -1 2302 200 73 44 chr5 136988146 136988735 -62641415 - MER82 DNA MER2_type -31 622 17 1708 236 167 67 chr5 136988759 136989610 -62640540 - L2 LINE L2 -797 2517 1582 252 295 139 30 chr5 136990180 136990346 -62639804 - MIR SINE MIR -26 236 53 666 227 121 41 chr5 136990546 136990934 -62639216 - Charlie7 DNA MER1_type -4 2608 2190 2398 92 0 0 chr5 136991340 136991644 -62638506 + AluSc SINE Alu 1 304 -5 276 254 103 48 chr5 136991843 136991916 -62638234 + MIR SINE MIR 65 149 -113 1495 128 36 0 chr5 136991916 136992135 -62638015 + AluSg/x SINE Alu 83 309 -1 276 254 103 48 chr5 136992135 136992187 -62637963 + MIR SINE MIR 149 197 -65 299 316 164 7 chr5 136992392 136992544 -62637606 + MIR SINE MIR 8 183 -79 196 180 0 60 chr5 136993524 136993574 -62636576 - MER5C DNA MER1_type -44 280 234 375 186 186 0 chr5 136993588 136993690 -62636460 - MER5C DNA MER1_type -200 124 4 216 158 0 0 chr5 136993713 136993751 -62636399 + (TA)n Simple_repeat Simple_repeat 1 38 0 43 20 0 0 chr5 136994487 136994537 -62635613 + AT_rich Low_complexity Low_complexity 1 50 0 490 267 108 61 chr5 136994769 136995134 -62635016 + L1ME4a LINE L1 4745 5091 -1030 2269 95 3 7 chr5 136995134 136995438 -62634712 + AluSq SINE Alu 9 311 -2 490 267 108 61 chr5 136995438 136995955 -62634195 + L1ME4a LINE L1 5091 5582 -539 1716 177 6 22 chr5 136995955 136996272 -62633878 - AluJo SINE Alu 0 312 1 490 267 108 61 chr5 136996272 136996311 -62633839 + L1ME4a LINE L1 5582 5618 -503 1109 123 30 47 chr5 136996311 136996546 -62633604 + L1MA8 LINE L1 6059 6289 -2 490 267 108 61 chr5 136996546 136996936 -62633214 + L1ME4a LINE L1 5618 6117 -4 2902 159 56 54 chr5 136998095 136998760 -62631390 + L1MB8 LINE L1 5508 6173 -5 2210 108 7 0 chr5 136999569 136999866 -62630284 + AluSx SINE Alu 1 299 -13 1204 175 21 133 chr5 137000631 137000968 -62629182 + AluJo SINE Alu 1 299 -3 1562 187 7 7 chr5 137001052 137001351 -62628799 + AluJo SINE Alu 1 299 -13 327 325 143 45 chr5 137001605 137001962 -62628188 - L2 LINE L2 -1 3312 2921 3257 121 27 27 chr5 137002118 137002665 -62627485 - LTR10A LTR ERV1 -62 547 1 2018 218 114 36 chr5 137002759 137003336 -62626814 - L1MD2 LINE L1 -20 6339 5718 888 191 79 5 chr5 137003486 137003675 -62626475 + MER20 DNA MER1_type 17 219 0 503 310 204 47 chr5 137003676 137004435 -62625715 - L2 LINE L2 -725 2589 1712 21 0 0 0 chr5 137005159 137005180 -62624970 + AT_rich Low_complexity Low_complexity 1 21 0 307 254 116 63 chr5 137005699 137005888 -62624262 + L1M2 LINE L1 754 952 -5897 314 291 169 61 chr5 137006116 137006442 -62623708 + L1M2 LINE L1 840 1200 -5649 234 254 51 0 chr5 137006727 137006786 -62623364 + L2 LINE L2 3211 3272 0 204 379 8 68 chr5 137006800 137006932 -62623218 + MIR SINE MIR 22 145 -63 2279 70 21 0 chr5 137007009 137007293 -62622857 - AluSg SINE Alu -17 293 4 880 258 187 21 chr5 137007661 137008366 -62621784 - L2 LINE L2 -1 3312 2488 1046 189 50 119 chr5 137008367 137008869 -62621281 - MLT1C LTR MaLR 0 467 1 258 264 42 0 chr5 137008946 137009018 -62621132 - MIR SINE MIR -71 191 117 2177 72 11 0 chr5 137009413 137009725 -62620425 - AluSc SINE Alu 0 315 1 298 197 0 14 chr5 137010085 137010156 -62619994 + MER53 DNA DNA 89 158 -31 626 241 44 75 chr5 137010197 137010425 -62619725 + MIR SINE MIR 23 243 -19 453 287 0 15 chr5 137010579 137010715 -62619435 - MER94 DNA DNA 0 134 1 269 303 67 34 chr5 137014690 137014809 -62615341 + MIR3 SINE MIR 45 167 -41 279 122 0 0 chr5 137014927 137014976 -62615174 + (A)n Simple_repeat Simple_repeat 1 49 0 448 248 118 21 chr5 137015064 137015302 -62614848 + L1M4 LINE L1 3809 4069 -2077 639 262 184 20 chr5 137015380 137015674 -62614476 + L2 LINE L2 2118 2459 -855 1403 162 79 4 chr5 137015679 137015932 -62614218 + L1MC3 LINE L1 7261 7532 -253 1499 166 49 91 chr5 137015933 137016413 -62613737 - MER89 LTR ERV1 0 559 2 1138 120 124 4 chr5 137016414 137016639 -62613511 + L1MC3 LINE L1 7530 7781 -4 396 0 0 0 chr5 137016639 137016683 -62613467 + (CA)n Simple_repeat Simple_repeat 2 45 0 512 263 325 23 chr5 137016683 137017325 -62612825 + L2 LINE L2 2451 3313 0 2233 96 7 3 chr5 137017967 137018259 -62611891 - AluSx SINE Alu -19 293 1 2177 143 27 30 chr5 137018685 137019050 -62611100 - THE1B LTR MaLR 0 364 1 892 296 24 14 chr5 137019709 137020006 -62610144 - L1MC/D LINE L1 -2059 5749 5450 24 67 0 0 chr5 137020326 137020371 -62609779 + AT_rich Low_complexity Low_complexity 1 45 0 614 239 8 0 chr5 137020374 137020491 -62609659 - FLAM_A SINE Alu -24 118 1 237 305 73 0 chr5 137020523 137020674 -62609476 - L1MC/D LINE L1 -1727 4419 4258 427 340 50 39 chr5 137020748 137021107 -62609043 - L1MC/D LINE L1 -3381 2765 2403 1734 164 0 17 chr5 137021601 137021899 -62608251 - AluJb SINE Alu -17 295 3 2344 97 0 0 chr5 137022377 137022677 -62607473 + AluSq SINE Alu 1 300 -13 3116 182 33 41 chr5 137023576 137024279 -62605871 - L1MB8 LINE L1 0 6178 5482 1308 235 58 4 chr5 137024255 137024706 -62605444 - L1MB8 LINE L1 -2763 3383 2909 * 889 202 35 5 chr5 137024741 137024939 -62605211 - MER3 DNA MER1_type -5 204 1 504 313 76 19 chr5 137025287 137025498 -62604652 - MIR SINE MIR -19 243 21 6199 156 13 1 chr5 137025509 137026556 -62603594 - L1MC2 LINE L1 -9 6335 5276 1363 216 28 4 chr5 137026568 137027616 -62602534 - L1MDa LINE L1 -2721 3843 2580 1144 167 26 34 chr5 137027696 137027929 -62602221 - L1MA9 LINE L1 -204 6108 5878 * 5833 182 91 37 chr5 137027926 137028667 -62601483 - L1MDa LINE L1 -3967 2597 1897 1031 98 5 27 chr5 137028667 137028851 -62601299 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 5833 182 91 37 chr5 137028851 137028902 -62601248 - L1MDa LINE L1 -4667 1897 1850 1938 169 0 6 chr5 137028902 137029216 -62600934 - AluSx SINE Alu 0 312 1 5833 182 91 37 chr5 137029216 137029641 -62600509 - L1MDa LINE L1 -4714 1850 1449 371 47 0 62 chr5 137029641 137029705 -62600445 - L1PA2 LINE L1 0 6155 6096 5833 182 91 37 chr5 137029705 137030102 -62600048 - L1MDa LINE L1 -5115 1449 894 1165 219 57 3 chr5 137030183 137030480 -62599670 - L1MDa LINE L1 -5147 898 586 25 31 0 0 chr5 137030882 137030914 -62599236 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 137031174 137031195 -62598955 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 137031323 137031353 -62598797 + AT_rich Low_complexity Low_complexity 1 30 0 239 208 108 15 chr5 137031389 137031519 -62598631 - L1M4 LINE L1 -3206 2940 2799 207 100 0 0 chr5 137031585 137031615 -62598535 + (TG)n Simple_repeat Simple_repeat 2 31 0 315 0 0 0 chr5 137032766 137032801 -62597349 + (CA)n Simple_repeat Simple_repeat 2 36 0 398 274 89 59 chr5 137032860 137033121 -62597029 - L1M4 LINE L1 -3624 2522 2246 1102 194 25 76 chr5 137033121 137033436 -62596714 - AluSx SINE Alu -3 299 1 398 274 89 59 chr5 137033436 137033532 -62596618 - L1M4 LINE L1 -3900 2246 2154 240 188 15 98 chr5 137033534 137033667 -62596483 + T-rich Low_complexity Low_complexity 2 123 0 534 255 38 16 chr5 137033809 137033993 -62596157 - HAL1 LINE L1 -57 2450 2263 * 1460 291 77 15 chr5 137033963 137034548 -62595602 - HAL1 LINE L1 -644 1863 1243 328 120 13 0 chr5 137034549 137034609 -62595541 + MSTB1 LTR MaLR 361 426 0 2085 162 9 0 chr5 137034662 137034996 -62595154 + MER1B DNA MER1_type 1 337 0 769 214 71 58 chr5 137035124 137035348 -62594802 + MIR SINE MIR 6 232 -30 180 416 20 0 chr5 137037711 137037812 -62592338 + L2 LINE L2 3093 3195 -77 628 305 99 19 chr5 137038098 137038472 -62591678 - L1MC/D LINE L1 -2019 5789 5386 200 257 29 114 chr5 137039536 137039676 -62590474 - L3 LINE CR1 -150 1427 1300 2480 59 7 7 chr5 137040106 137040413 -62589737 + AluY SINE Alu 1 307 -4 781 89 138 8 chr5 137040541 137040664 -62589486 + MSTD LTR MaLR 1 139 -257 1522 153 40 13 chr5 137040666 137040967 -62589183 + L1MA5A LINE L1 5982 6290 -7 203 250 97 28 chr5 137041002 137041074 -62589076 + MER5A DNA MER1_type 50 126 -63 213 154 0 0 chr5 137041585 137041624 -62588526 + (TA)n Simple_repeat Simple_repeat 1 39 0 24 32 0 0 chr5 137041708 137041739 -62588411 + AT_rich Low_complexity Low_complexity 1 31 0 2243 122 169 47 chr5 137041739 137042282 -62587868 + MER4B LTR ERV1 10 779 0 962 170 36 21 chr5 137042327 137042521 -62587629 + MSTD LTR MaLR 200 396 0 279 79 0 0 chr5 137042629 137042667 -62587483 + (CA)n Simple_repeat Simple_repeat 1 38 0 2089 131 0 10 chr5 137043355 137043661 -62586489 - AluSq SINE Alu 0 313 11 463 289 115 18 chr5 137043704 137044043 -62586107 + L1ME4a LINE L1 5546 5917 -204 22 0 0 0 chr5 137044156 137044178 -62585972 + AT_rich Low_complexity Low_complexity 1 22 0 2354 132 0 11 chr5 137044321 137044691 -62585459 + MER47A DNA MER2_type 1 366 0 3674 23 0 0 chr5 137045855 137046287 -62583863 - L1PA2 LINE L1 -1 6154 5723 1453 0 0 0 chr5 137046285 137046445 -62583705 + L1PA2 LINE L1 5548 5707 -448 238 80 40 0 chr5 137047149 137047199 -62582951 + (TA)n Simple_repeat Simple_repeat 2 53 0 4894 170 31 16 chr5 137047469 137048440 -62581710 + L1MCa LINE L1 19 1003 -5423 4351 166 27 1 chr5 137048440 137049219 -62580931 + L1MC1 LINE L1 5529 6327 -6 22 35 0 0 chr5 137049263 137049292 -62580858 + AT_rich Low_complexity Low_complexity 1 29 0 216 328 83 3 chr5 137049764 137049878 -62580272 - MIR3 SINE MIR -48 160 56 13052 135 50 12 chr5 137050839 137053143 -62577007 + Tigger1 DNA MER2_type 26 2418 0 223 286 83 24 chr5 137054341 137054425 -62575725 + MIR3 SINE MIR 110 198 -10 562 174 10 0 chr5 137054503 137054601 -62575549 - MER63B DNA MER1_type -1 433 335 1911 152 50 0 chr5 137054608 137054905 -62575245 + AluJb SINE Alu 1 312 0 995 216 0 63 chr5 137054917 137055122 -62575028 - MER63B DNA MER1_type -810 252 65 2057 105 0 0 chr5 137055122 137055432 -62574718 - AluSx SINE Alu 0 326 17 995 216 0 63 chr5 137055432 137055494 -62574656 - MER63B DNA MER1_type -997 65 1 851 291 17 4 chr5 137055649 137055890 -62574260 - LTR16B LTR ERVL -130 334 91 587 270 166 19 chr5 137056377 137056636 -62573514 - L2 LINE L2 0 3313 3017 455 301 70 84 chr5 137058413 137058780 -62571370 - HAL1 LINE L1 -1004 1503 1144 5991 93 33 3 chr5 137058780 137060628 -62569522 + L1PA13 LINE L1 4289 6162 -1 455 301 70 84 chr5 137060628 137060785 -62569365 - HAL1 LINE L1 -1363 1144 986 2089 157 0 3 chr5 137060986 137061298 -62568852 - AluJo SINE Alu -1 311 1 506 302 34 28 chr5 137061969 137062148 -62568002 - MIR SINE MIR -6 256 77 485 217 26 9 chr5 137064875 137064990 -62565160 - MER94 DNA DNA -17 117 1 213 39 0 0 chr5 137066496 137066522 -62563628 + (CTG)n Simple_repeat Simple_repeat 2 27 0 312 309 63 40 chr5 137066938 137067113 -62563037 - MIR3 SINE MIR 0 208 30 23 33 0 0 chr5 137067217 137067247 -62562903 + AT_rich Low_complexity Low_complexity 1 30 0 180 135 0 0 chr5 137067347 137067384 -62562766 + (GA)n Simple_repeat Simple_repeat 2 38 0 1203 124 16 21 chr5 137067859 137068053 -62562097 + AluJb SINE Alu 96 288 -24 252 0 0 0 chr5 137068056 137068084 -62562066 + (TAAAA)n Simple_repeat Simple_repeat 5 32 0 210 279 54 72 chr5 137069485 137069596 -62560554 - MIR SINE MIR -80 128 20 417 281 7 41 chr5 137070172 137070318 -62559832 + MIR SINE MIR 72 212 -50 850 134 0 0 chr5 137070451 137070570 -62559580 + FLAM_C SINE Alu 1 119 -24 741 234 52 60 chr5 137070989 137071241 -62558909 + MER77 LTR ERV1 55 304 -301 300 230 35 23 chr5 137071236 137071323 -62558827 + MER77 LTR ERV1 509 596 -9 * 280 286 77 0 chr5 137071755 137071846 -62558304 - MIR SINE MIR -73 189 92 262 322 2 22 chr5 137072597 137072706 -62557444 + MIR SINE MIR 38 145 -63 2025 130 0 7 chr5 137072754 137073077 -62557073 + AluSx SINE Alu 1 321 0 468 214 35 7 chr5 137073087 137073232 -62556918 - MER53 DNA DNA -12 177 29 241 261 145 0 chr5 137073376 137073445 -62556705 + Charlie1b DNA MER1_type 1 79 -444 659 217 8 0 chr5 137073460 137073580 -62556570 - FLAM_A SINE Alu -12 121 1 1768 169 30 58 chr5 137073582 137074048 -62556102 + Charlie1b DNA MER1_type 71 523 0 606 189 18 156 chr5 137074139 137074414 -62555736 + MIR SINE MIR 20 256 -6 617 194 24 0 chr5 137075445 137075569 -62554581 + MIR SINE MIR 106 232 -30 353 191 0 0 chr5 137075569 137075637 -62554513 + MER116 DNA Mariner 13 80 0 541 303 49 33 chr5 137075834 137076078 -62554072 + MIR SINE MIR 9 256 -6 2223 105 0 10 chr5 137076338 137076644 -62553506 + AluSc SINE Alu 1 303 -6 2647 139 20 49 chr5 137076780 137077268 -62552882 + MER101 LTR ERV1 1 474 0 730 203 0 0 chr5 137078584 137078717 -62551433 + FLAM_A SINE Alu 1 133 0 288 291 146 36 chr5 137079182 137079347 -62550803 + MIR3 SINE MIR 26 208 0 2198 211 44 16 chr5 137079806 137080370 -62549780 + L1ME1 LINE L1 5582 6161 -5 371 231 10 146 chr5 137080455 137080654 -62549496 + MIR SINE MIR 75 246 -16 481 257 144 40 chr5 137083913 137084135 -62546015 - MIR SINE MIR -12 250 6 379 273 93 6 chr5 137084672 137084844 -62545306 + MER5A DNA MER1_type 1 187 -2 760 288 93 14 chr5 137085636 137085914 -62544236 - L2 LINE L2 0 3313 3014 337 163 11 51 chr5 137086458 137086553 -62543597 - MIR3 SINE MIR -43 165 74 203 303 56 34 chr5 137088501 137088590 -62541560 - L3 LINE CR1 -3 1574 1484 263 305 31 55 chr5 137089320 137089448 -62540702 + L2 LINE L2 3188 3312 -1 21 0 0 0 chr5 137091833 137091854 -62538296 + AT_rich Low_complexity Low_complexity 1 21 0 181 336 115 0 chr5 137092931 137093035 -62537115 - L3b LINE CR1 -241 1342 1227 191 375 56 19 chr5 137093710 137093977 -62536173 - L2 LINE L2 -337 2977 2701 318 167 233 22 chr5 137094220 137094310 -62535840 + L2 LINE L2 3201 3309 -4 420 111 0 0 chr5 137095282 137095345 -62534805 + (TAGTG)n Simple_repeat Simple_repeat 3 65 0 228 320 49 49 chr5 137095387 137095509 -62534641 + L2 LINE L2 3142 3263 -9 207 0 0 0 chr5 137095645 137095668 -62534482 + (A)n Simple_repeat Simple_repeat 1 23 0 525 331 114 6 chr5 137096637 137096812 -62533338 + MER91A DNA MER1_type 1 194 -2 302 270 20 30 chr5 137096833 137096933 -62533217 - MER5A DNA MER1_type -70 119 21 3257 217 28 7 chr5 137099297 137100329 -62529821 + L1M4 LINE L1 4510 5558 -616 2151 113 23 0 chr5 137101271 137101571 -62528579 - AluSx SINE Alu -5 307 1 36 40 0 0 chr5 137101725 137101775 -62528375 + AT_rich Low_complexity Low_complexity 1 50 0 897 76 0 0 chr5 137101801 137101919 -62528231 - AluY SINE Alu -10 301 184 64 35 0 0 chr5 137101919 137102004 -62528146 + AT_rich Low_complexity Low_complexity 1 85 0 344 293 38 32 chr5 137104339 137104496 -62525654 - MIR3 SINE MIR -4 204 47 241 296 83 19 chr5 137106981 137107089 -62523061 + MIR SINE MIR 33 147 -61 524 288 177 59 chr5 137107447 137107485 -62522665 + L2 LINE L2 2326 2358 -956 2392 81 3 3 chr5 137107485 137107795 -62522355 + AluY SINE Alu 1 310 -1 524 288 177 59 chr5 137107795 137107892 -62522258 + L2 LINE L2 2358 2442 -872 2295 104 23 0 chr5 137107892 137108191 -62521959 - AluSx SINE Alu -6 306 1 524 288 177 59 chr5 137108191 137108478 -62521672 + L2 LINE L2 2442 2799 -515 520 208 40 0 chr5 137108478 137108603 -62521547 + MER94 DNA DNA 5 134 0 580 334 97 62 chr5 137108817 137109050 -62521100 + L2 LINE L2 2524 2747 -525 593 213 24 0 chr5 137109050 137109177 -62520973 + MER94 DNA DNA 5 134 0 580 334 97 62 chr5 137109177 137109670 -62520480 + L2 LINE L2 2747 3272 0 565 246 142 11 chr5 137109938 137110121 -62520029 - MIR SINE MIR -9 253 47 21 36 0 0 chr5 137111197 137111225 -62518925 + AT_rich Low_complexity Low_complexity 1 28 0 605 263 141 40 chr5 137111253 137111675 -62518475 + MLT1H LTR MaLR 13 525 -24 219 36 0 0 chr5 137111675 137111703 -62518447 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 605 263 141 40 chr5 137111703 137111731 -62518419 + MLT1H LTR MaLR 525 549 0 201 147 0 0 chr5 137112800 137112834 -62517316 + (CA)n Simple_repeat Simple_repeat 1 34 0 230 182 0 18 chr5 137114202 137114257 -62515893 + A-rich Low_complexity Low_complexity 3 56 0 1914 166 0 0 chr5 137115300 137115590 -62514560 - AluJo SINE Alu -22 290 1 388 326 51 6 chr5 137118510 137118844 -62511306 + L1M4 LINE L1 3875 4223 -1923 344 260 60 0 chr5 137119277 137119377 -62510773 - MIR SINE MIR -30 232 127 1913 141 4 4 chr5 137119386 137119662 -62510488 + AluSx SINE Alu 19 294 -18 7376 75 4 20 chr5 137119834 137119943 -62510207 + L1MA1 LINE L1 5148 5257 -1045 613 76 0 0 chr5 137119943 137120022 -62510128 + MADE1 DNA Mariner 2 80 0 7376 75 4 20 chr5 137120022 137121080 -62509070 + L1MA1 LINE L1 5257 6296 -6 22 0 0 0 chr5 137121080 137121102 -62509048 + AT_rich Low_complexity Low_complexity 1 22 0 200 348 127 17 chr5 137123022 137123140 -62507010 - L2 LINE L2 -8 3264 3134 281 406 31 6 chr5 137123853 137124013 -62506137 - L2 LINE L2 -817 2497 2334 190 305 161 30 chr5 137124496 137124794 -62505356 - L2 LINE L2 -1105 2209 1873 391 356 46 16 chr5 137125305 137125499 -62504651 - L3b LINE CR1 -253 1330 1131 220 323 79 65 chr5 137125993 137126132 -62504018 - L3b LINE CR1 -195 1388 1252 2861 42 0 14 chr5 137126132 137126491 -62503659 - L1PA8 LINE L1 0 6172 5819 220 323 79 65 chr5 137126491 137126630 -62503520 - L3b LINE CR1 -331 1252 1106 196 264 42 93 chr5 137128134 137128327 -62501823 - L2 LINE L2 -422 2892 2710 2509 50 0 0 chr5 137128548 137128846 -62501304 + AluY SINE Alu 10 307 -4 310 360 110 17 chr5 137129804 137130160 -62499990 - L3b LINE CR1 -93 1490 1102 315 335 67 91 chr5 137131719 137132080 -62498070 - L2 LINE L2 -5 3267 2916 872 158 0 0 chr5 137132360 137132499 -62497651 - FLAM_C SINE Alu -3 140 2 180 0 0 0 chr5 137132710 137132730 -62497420 + (TAA)n Simple_repeat Simple_repeat 3 22 0 1769 163 30 10 chr5 137132793 137133088 -62497062 - AluJb SINE Alu -11 301 1 228 315 140 0 chr5 137133088 137133231 -62496919 + L1ME4a LINE L1 5511 5673 -448 480 139 0 0 chr5 137133231 137133310 -62496840 + (TG)n Simple_repeat Simple_repeat 2 80 0 708 272 140 13 chr5 137133349 137133577 -62496573 - MIR SINE MIR -3 259 3 452 257 55 15 chr5 137133588 137133790 -62496360 + L1ME4a LINE L1 5688 5897 -224 1695 201 0 3 chr5 137133791 137134080 -62496070 + AluJb SINE Alu 1 288 -24 284 274 34 0 chr5 137134239 137134356 -62495794 + L1ME4a LINE L1 5985 6105 -16 4378 114 10 1 chr5 137134470 137135143 -62495007 - L1PA13 LINE L1 -30 6133 5455 204 318 82 12 chr5 137135188 137135273 -62494877 - MIR SINE MIR -132 130 40 2438 74 0 0 chr5 137135538 137135879 -62494271 + AluY SINE Alu 1 311 0 1906 164 0 0 chr5 137135934 137136220 -62493930 + AluJb SINE Alu 1 286 -26 274 204 0 0 chr5 137136330 137136379 -62493771 + L2 LINE L2 3222 3270 -2 392 270 91 87 chr5 137136540 137136792 -62493358 - MIR SINE MIR -8 254 2 1623 203 3 16 chr5 137138245 137138561 -62491589 - AluJo SINE Alu 0 312 1 1870 112 97 0 chr5 137138811 137139079 -62491071 + AluSx SINE Alu 1 294 -18 189 0 0 0 chr5 137140905 137140926 -62489224 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 676 188 0 0 chr5 137140926 137141043 -62489107 - FRAM SINE Alu -40 136 20 326 311 58 50 chr5 137141299 137141662 -62488488 - L1ME LINE L1 -538 5628 5263 2297 115 0 3 chr5 137142413 137142726 -62487424 + AluSx SINE Alu 1 312 0 2358 100 0 3 chr5 137143567 137143878 -62486272 + AluSg SINE Alu 1 310 0 857 291 74 67 chr5 137144158 137144481 -62485669 - L2 LINE L2 0 3313 2994 2242 122 0 10 chr5 137144481 137144792 -62485358 + AluSx SINE Alu 1 308 -4 857 291 74 67 chr5 137144792 137145320 -62484830 - L2 LINE L2 -319 2994 2469 1787 163 3 3 chr5 137145635 137145941 -62484209 + AluJo SINE Alu 1 306 -6 302 275 60 34 chr5 137146058 137146207 -62483943 - MIR SINE MIR 0 262 110 185 323 97 11 chr5 137147223 137147316 -62482834 - MIR3 SINE MIR -1 207 107 711 311 66 0 chr5 137147485 137147726 -62482424 + MIR SINE MIR 6 262 0 346 350 58 0 chr5 137148393 137148513 -62481637 + L2 LINE L2 3141 3267 -5 246 279 115 39 chr5 137148579 137148683 -62481467 - L2 LINE L2 -20 3252 3141 1076 304 22 10 chr5 137149229 137149631 -62480519 + ERVL LTR ERVL 5019 5425 -339 1998 224 43 108 chr5 137149944 137150730 -62479420 + LTR41 LTR ERVL 6 740 -33 2709 182 135 109 chr5 137150733 137150936 -62479214 + L1MC3 LINE L1 6691 6887 -898 2162 113 3 3 chr5 137150936 137151236 -62478914 + AluSx SINE Alu 1 300 -12 2709 182 135 109 chr5 137151236 137151413 -62478737 + L1MC3 LINE L1 6887 7058 -727 274 258 0 54 chr5 137151413 137151506 -62478644 + MLT1F1 LTR MaLR 35 122 -445 2709 182 135 109 chr5 137151506 137152098 -62478052 + L1MC3 LINE L1 7058 7784 -1 567 0 0 0 chr5 137153141 137153204 -62476946 + (CA)n Simple_repeat Simple_repeat 2 64 0 23 0 0 0 chr5 137159152 137159175 -62470975 + AT_rich Low_complexity Low_complexity 1 23 0 416 311 87 12 chr5 137159345 137159506 -62470644 - MIR3 SINE MIR -4 204 32 1174 167 38 11 chr5 137160023 137160287 -62469863 + L1MB8 LINE L1 5903 6173 -5 6168 224 58 54 chr5 137161402 137161732 -62468418 + L1MEc LINE L1 2028 2355 -3860 2347 49 21 3 chr5 137161732 137162020 -62468130 + AluY SINE Alu 1 293 -18 6168 224 58 54 chr5 137162020 137164248 -62465902 + L1MEc LINE L1 2355 4572 -1643 403 183 0 0 chr5 137164232 137164314 -62465836 + L1ME1 LINE L1 2673 2754 -3461 * 274 293 20 0 chr5 137164322 137164421 -62465729 + L1ME1 LINE L1 4569 4669 -1546 1939 247 22 16 chr5 137164475 137165025 -62465125 + L1ME1 LINE L1 5678 6230 -5 487 352 23 5 chr5 137166409 137166628 -62463522 - MER102b DNA MER1_type 0 341 119 693 174 0 36 chr5 137166758 137166934 -62463216 - AluJb SINE Alu 0 312 176 26 0 0 0 chr5 137167344 137167370 -62462780 + AT_rich Low_complexity Low_complexity 1 26 0 346 227 250 0 chr5 137167496 137167628 -62462522 + MER103 DNA DNA 1 165 -1 227 194 0 69 chr5 137170030 137170102 -62460048 - MER117 DNA MER1_type -49 148 82 522 269 74 61 chr5 137171912 137171946 -62458204 + L1MB2 LINE L1 5349 5381 -793 2159 108 10 20 chr5 137171946 137172252 -62457898 - AluSx SINE Alu -8 304 2 522 269 74 61 chr5 137172252 137172463 -62457687 + L1MB2 LINE L1 5381 5596 -578 294 264 181 32 chr5 137172472 137172627 -62457523 + MLT1J LTR MaLR 1 178 -333 189 233 0 67 chr5 137172808 137172868 -62457282 - L3b LINE CR1 -20 1563 1508 22 70 0 0 chr5 137173168 137173211 -62456939 + AT_rich Low_complexity Low_complexity 1 43 0 1240 110 59 13 chr5 137173472 137173708 -62456442 - L1MA2 LINE L1 -137 6167 5921 1058 99 26 0 chr5 137173676 137173827 -62456323 + L1MA3 LINE L1 6143 6297 -8 * 23 54 0 0 chr5 137173836 137173873 -62456277 + AT_rich Low_complexity Low_complexity 1 37 0 182 244 26 17 chr5 137174078 137174193 -62455957 + GA-rich Low_complexity Low_complexity 4 119 0 1695 164 31 25 chr5 137174941 137175295 -62454855 + L1MB2 LINE L1 5814 6169 -2 317 192 21 29 chr5 137175624 137175738 -62454412 - Alu SINE Alu -254 46 1 383 260 92 58 chr5 137176671 137176867 -62453283 - MIR SINE MIR -40 222 15 306 225 25 25 chr5 137177346 137177426 -62452724 + (CATA)n Simple_repeat Simple_repeat 4 83 0 1977 147 46 3 chr5 137177490 137177836 -62452314 + MER46B DNA MER2_type 1 236 0 6142 92 15 5 chr5 137177872 137178550 -62451600 + L1PB1 LINE L1 5105 5797 -354 195 42 0 0 chr5 137178550 137178574 -62451576 + (CATA)n Simple_repeat Simple_repeat 2 25 0 6142 92 15 5 chr5 137178574 137178933 -62451217 + L1PB1 LINE L1 5797 6151 0 22 0 0 0 chr5 137179088 137179110 -62451040 + AT_rich Low_complexity Low_complexity 1 22 0 345 300 30 0 chr5 137179239 137179339 -62450811 + MER5A DNA MER1_type 10 112 -77 376 254 177 0 chr5 137180210 137180340 -62449810 + MIR SINE MIR 97 249 -13 226 315 0 62 chr5 137180386 137180516 -62449634 + L2 LINE L2 3151 3272 0 888 124 0 0 chr5 137180835 137180964 -62449186 - FLAM_C SINE Alu -4 129 1 472 284 159 16 chr5 137182572 137182892 -62447258 + L1ME4a LINE L1 5496 5861 -260 241 368 66 28 chr5 137183020 137183202 -62446948 - MIR3 SINE MIR -13 195 7 857 248 22 106 chr5 137184506 137184828 -62445322 - L2 LINE L2 0 3313 3019 21 0 0 0 chr5 137184947 137184968 -62445182 + AT_rich Low_complexity Low_complexity 1 21 0 274 344 46 15 chr5 137185194 137185325 -62444825 + L2 LINE L2 3138 3272 0 251 317 134 21 chr5 137186756 137186898 -62443252 + MIR3 SINE MIR 21 178 -30 2964 133 33 0 chr5 137187178 137187630 -62442520 + LTR24 LTR ERV1 1 467 0 205 211 0 7 chr5 137188209 137188280 -62441870 - L2 LINE L2 -8 3264 3143 213 284 0 11 chr5 137188452 137188540 -62441610 + (TTAAA)n Simple_repeat Simple_repeat 2 88 0 1006 152 24 0 chr5 137189476 137189641 -62440509 - L1MA1 LINE L1 0 6302 6134 2862 137 48 42 chr5 137189727 137189999 -62440151 + L1MA8 LINE L1 5709 5978 -313 2197 114 3 0 chr5 137189999 137190298 -62439852 + AluSg SINE Alu 1 300 -10 2862 137 48 42 chr5 137190298 137190603 -62439547 + L1MA8 LINE L1 5978 6290 -1 528 271 45 68 chr5 137191057 137191278 -62438872 - MIR SINE MIR -32 230 15 1105 167 48 24 chr5 137191897 137192107 -62438043 + AluJb SINE Alu 85 299 -13 2027 118 45 0 chr5 137192113 137192402 -62437748 + AluSx SINE Alu 3 304 -8 202 355 0 0 chr5 137192402 137192464 -62437686 - L2 LINE L2 -83 3189 3128 182 352 33 33 chr5 137192495 137192586 -62437564 - MIR SINE MIR -150 112 22 207 174 0 65 chr5 137193263 137193309 -62436841 + polypyrimidine Low_complexity Low_complexity 3 45 0 527 269 22 0 chr5 137193829 137193963 -62436187 + MIR SINE MIR 60 196 -66 201 360 8 56 chr5 137194482 137194607 -62435543 - L3 LINE CR1 -32 1545 1427 189 263 0 0 chr5 137194736 137194774 -62435376 + MIR SINE MIR 87 124 -84 207 389 0 23 chr5 137194973 137195104 -62435046 + L3 LINE CR1 1007 1134 -443 439 358 110 4 chr5 137195156 137195402 -62434748 + L3 LINE CR1 1264 1535 -42 994 258 18 4 chr5 137195463 137195692 -62434458 + MIR SINE MIR 29 260 -2 441 292 34 64 chr5 137195739 137196006 -62434144 - L2 LINE L2 -40 3273 3015 198 71 0 0 chr5 137197616 137197644 -62432506 + (TG)n Simple_repeat Simple_repeat 1 28 0 248 273 0 23 chr5 137197647 137197735 -62432415 + (TA)n Simple_repeat Simple_repeat 2 87 0 1144 96 0 0 chr5 137197735 137197892 -62432258 + Tigger5 DNA MER2_type 2072 2228 -95 1222 184 105 45 chr5 137197892 137198159 -62431991 + AluJo SINE Alu 6 288 -24 492 198 0 0 chr5 137198171 137198252 -62431898 + Tigger5 DNA MER2_type 2241 2321 -2 386 333 126 13 chr5 137198883 137199114 -62431036 + MIR SINE MIR 3 259 -3 495 113 0 0 chr5 137199340 137199420 -62430730 + (CA)n Simple_repeat Simple_repeat 2 81 0 420 311 2 33 chr5 137200276 137200480 -62429670 + L1MEc LINE L1 2125 2330 -3825 1399 62 0 5 chr5 137200583 137200776 -62429374 - L1MA1 LINE L1 -296 6006 5815 265 274 110 12 chr5 137201085 137201249 -62428901 - L1ME4a LINE L1 -206 5915 5736 542 233 247 0 chr5 137202352 137202498 -62427652 - MER5A DNA MER1_type -1 188 7 347 233 35 23 chr5 137203064 137203150 -62427000 - L2 LINE L2 0 3272 3186 1949 149 20 0 chr5 137203267 137203569 -62426581 - AluSx SINE Alu -4 308 1 22 35 0 0 chr5 137204005 137204034 -62426116 + AT_rich Low_complexity Low_complexity 1 29 0 238 317 133 31 chr5 137206539 137206832 -62423318 - L2 LINE L2 -686 2628 2306 219 311 16 0 chr5 137206838 137206899 -62423251 - L2 LINE L2 -13 3300 3239 502 254 7 22 chr5 137207715 137207853 -62422297 - MIR SINE MIR 0 262 127 198 143 0 0 chr5 137208420 137208455 -62421695 + (TG)n Simple_repeat Simple_repeat 2 36 0 2378 98 0 6 chr5 137208787 137209102 -62421048 + AluSq SINE Alu 1 313 0 1667 159 13 45 chr5 137210588 137210896 -62419254 + AluJo SINE Alu 1 298 -14 303 250 26 0 chr5 137210896 137210972 -62419178 - L1MC4 LINE L1 -1352 6690 6613 2151 195 116 6 chr5 137212684 137213167 -62416983 + MLT1F LTR MaLR 5 540 -2 298 203 0 5 chr5 137213688 137213765 -62416385 - L1MD3 LINE L1 -8 7987 7703 246 261 27 0 chr5 137213765 137213876 -62416274 + (TA)n Simple_repeat Simple_repeat 2 115 0 736 222 43 19 chr5 137213876 137214083 -62416067 - L1MC4 LINE L1 -132 7910 7699 318 153 0 0 chr5 137215337 137215396 -62414754 + (CA)n Simple_repeat Simple_repeat 1 59 0 423 303 57 46 chr5 137215510 137215685 -62414465 - MIR3 SINE MIR -1 207 31 351 180 39 69 chr5 137216774 137216866 -62413284 - MIR3 SINE MIR -50 158 69 235 288 55 0 chr5 137217245 137217318 -62412832 + L2 LINE L2 3199 3275 -38 2103 141 7 0 chr5 137217423 137217721 -62412429 + AluSx SINE Alu 1 300 -12 390 74 0 0 chr5 137217721 137217775 -62412375 + (GGGA)n Simple_repeat Simple_repeat 1 54 0 1372 152 4 0 chr5 137218487 137218717 -62411433 - MLT1A1 LTR MaLR -13 352 122 2857 73 0 8 chr5 137218887 137219270 -62410880 - L1PA6 LINE L1 -4 6150 5771 2588 44 41 0 chr5 137219270 137219632 -62410518 + L1P LINE L1 4938 5314 -832 390 317 153 7 chr5 137219632 137219918 -62410232 + L2 LINE L2 2723 3055 -217 1819 173 7 0 chr5 137221003 137221304 -62408846 - AluJb SINE Alu -8 304 2 25 0 0 0 chr5 137221382 137221407 -62408743 + AT_rich Low_complexity Low_complexity 1 25 0 192 348 0 29 chr5 137222391 137222460 -62407690 + L2 LINE L2 3142 3208 -64 4660 154 36 12 chr5 137226315 137226708 -62403442 + L1MB3 LINE L1 5080 5462 -721 1118 53 0 7 chr5 137226708 137226859 -62403291 + (GAAA)n Simple_repeat Simple_repeat 1 150 0 4660 154 36 12 chr5 137226859 137227532 -62402618 + L1MB3 LINE L1 5462 6175 -8 208 67 89 0 chr5 137227889 137227934 -62402216 + T-rich Low_complexity Low_complexity 5 53 0 3265 26 5 0 chr5 137227935 137228318 -62401832 - L1PA4 LINE L1 -3 6152 5768 283 374 50 14 chr5 137229517 137229656 -62400494 - MIR SINE MIR -99 163 20 740 176 22 0 chr5 137231808 137231944 -62398206 - MLT1A2 LTR MaLR 0 374 236 1899 166 0 3 chr5 137232012 137232325 -62397825 + AluSx SINE Alu 1 312 0 727 282 45 23 chr5 137232835 137233055 -62397095 - MIR SINE MIR -16 246 22 386 265 51 8 chr5 137233136 137233253 -62396897 + L2 LINE L2 3190 3311 -2 2255 112 3 0 chr5 137233450 137233745 -62396405 - AluSx SINE Alu -10 302 7 2400 170 0 31 chr5 137234236 137234690 -62395460 - L1MB5 LINE L1 -84 6090 5651 555 220 226 11 chr5 137235008 137235185 -62394965 - MIR SINE MIR 0 262 48 468 238 48 20 chr5 137236165 137236312 -62393838 - L1ME3A LINE L1 0 6170 6020 198 143 0 0 chr5 137237047 137237082 -62393068 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 358 203 242 0 chr5 137238195 137238323 -62391827 + MER5A DNA MER1_type 26 184 -5 475 89 13 0 chr5 137239361 137239440 -62390710 - L1MA2 LINE L1 0 6304 6225 2108 140 0 0 chr5 137239539 137239853 -62390297 + AluSq SINE Alu 1 314 0 1038 267 74 47 chr5 137241139 137241652 -62388498 + Tigger8 DNA MER2_type 114 640 -26 1992 141 0 0 chr5 137241968 137242289 -62387861 - AluSx SINE Alu 0 321 1 310 213 228 29 chr5 137242946 137243082 -62387068 + MER5A DNA MER1_type 1 163 -26 * 333 318 209 0 chr5 137242970 137243099 -62387051 - MER5A DNA MER1_type -13 176 21 218 354 15 0 chr5 137243095 137243160 -62386990 - L2 LINE L2 -559 2755 2690 * 350 277 26 65 chr5 137243230 137243330 -62386820 + MER5A DNA MER1_type 35 128 -61 447 152 0 0 chr5 137243330 137243409 -62386741 - MER116 DNA Mariner -1 79 1 350 277 26 65 chr5 137243409 137243463 -62386687 + MER5A DNA MER1_type 128 183 -6 255 306 0 99 chr5 137243640 137243761 -62386389 - MIR3 SINE MIR -15 193 85 284 288 0 0 chr5 137243950 137244009 -62386141 + L2 LINE L2 3255 3313 0 769 248 72 22 chr5 137244380 137244602 -62385548 - MIR SINE MIR 0 262 30 447 250 13 13 chr5 137247553 137247569 -62382581 - L1MA10 LINE L1 -1 6333 6318 4326 216 68 32 chr5 137247569 137249971 -62380179 - L1ME2 LINE L1 -9 6155 3673 1700 243 69 28 chr5 137249949 137250351 -62379799 - L1ME2 LINE L1 -2880 3266 2825 * 3677 152 24 1 chr5 137250351 137251009 -62379141 - L1MA4A LINE L1 -3 6300 5628 1700 243 69 28 chr5 137251009 137251274 -62378876 - L1ME2 LINE L1 -3321 2825 2572 809 330 101 42 chr5 137251274 137252060 -62378090 - L3 LINE CR1 -564 1013 182 621 249 75 12 chr5 137252121 137252294 -62377856 - MIR SINE MIR -66 196 13 465 248 23 15 chr5 137252915 137253048 -62377102 + MER112 DNA MER1_type 18 151 -109 377 222 278 7 chr5 137253054 137253198 -62376952 - MER5A DNA MER1_type -3 186 4 328 179 0 0 chr5 137253669 137253725 -62376425 - LTR67 LTR ERVL 0 557 502 427 106 0 118 chr5 137254136 137254221 -62375929 - MADE1 DNA Mariner 0 80 6 476 286 107 79 chr5 137255503 137255923 -62374227 - LTR67 LTR ERVL -18 539 108 438 269 19 111 chr5 137255984 137256200 -62373950 - MER91A DNA MER1_type 0 196 1 26 30 0 0 chr5 137256738 137256771 -62373379 + AT_rich Low_complexity Low_complexity 1 33 0 553 246 114 14 chr5 137257052 137257263 -62372887 - L2 LINE L2 -1441 1873 1642 6323 260 99 19 chr5 137257281 137259282 -62370868 + L2 LINE L2 636 2796 -518 595 279 41 20 chr5 137259283 137259634 -62370516 - LTR16A LTR ERVL 0 450 52 857 262 118 68 chr5 137259693 137260166 -62369984 + L2 LINE L2 2812 3308 -5 199 298 0 0 chr5 137261457 137261514 -62368636 + L2 LINE L2 590 646 -2668 426 261 109 63 chr5 137262175 137262715 -62367435 - L1MC5 LINE L1 -20 7941 7377 519 223 92 23 chr5 137262764 137262882 -62367268 + MER3 DNA MER1_type 1 130 -32 216 86 0 0 chr5 137262882 137262917 -62367233 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 519 223 92 23 chr5 137262917 137262928 -62367222 + MER3 DNA MER1_type 130 139 -70 2281 209 18 29 chr5 137263301 137263793 -62366357 + L1PA12 LINE L1 9 495 -7086 7299 121 15 14 chr5 137263797 137264917 -62365233 + L1PA11 LINE L1 4085 5205 -969 2533 101 27 3 chr5 137264917 137265283 -62364867 - THE1C LTR MaLR 0 375 1 7299 121 15 14 chr5 137265283 137266147 -62364003 + L1PA11 LINE L1 5205 6066 -108 * 16528 70 4 1 chr5 137266137 137268293 -62361857 - L1PA5 LINE L1 -3573 2573 411 22651 45 0 2 chr5 137268293 137271886 -62358264 + L1PA5 LINE L1 2557 6152 -2 856 78 0 0 chr5 137271886 137271999 -62358151 + L1PA11 LINE L1 6052 6166 -8 574 220 75 79 chr5 137272098 137272407 -62357743 + MLT1K LTR MaLR 228 578 -10 275 252 112 9 chr5 137272462 137272569 -62357581 + MIR SINE MIR 105 222 -40 4343 180 18 32 chr5 137274455 137275738 -62354412 + L1MB8 LINE L1 4914 6178 0 380 286 16 44 chr5 137275929 137276111 -62354039 + LTR33A LTR ERVL 345 521 -2 579 278 165 73 chr5 137276233 137276591 -62353559 + MLT1L LTR MaLR 119 529 -86 2386 88 0 10 chr5 137276591 137276931 -62353219 - AluSx SINE Alu 0 312 1 579 278 165 73 chr5 137276931 137277026 -62353124 + MLT1L LTR MaLR 529 614 -1 1152 222 133 33 chr5 137277873 137278233 -62351917 - MSTD LTR MaLR 0 396 1 514 89 51 0 chr5 137279115 137279194 -62350956 + MER4D LTR ERV1 771 853 -19 473 50 0 0 chr5 137279194 137279254 -62350896 + MER4D LTR ERV1 813 872 0 2527 165 116 68 chr5 137279277 137280028 -62350122 + LTR48 LTR ERV1 1 787 0 887 187 48 61 chr5 137280104 137280334 -62349816 - MER31A LTR ERV1 -1 484 258 660 303 41 15 chr5 137280867 137281138 -62349012 + HAL1 LINE L1 1683 1960 -547 2109 183 74 128 chr5 137281189 137281956 -62348194 + LTR8A LTR ERV1 1 726 -1 2296 99 3 0 chr5 137281982 137282276 -62347874 - AluSx SINE Alu -17 295 1 766 245 48 65 chr5 137282418 137282851 -62347299 + HAL1 LINE L1 2082 2507 0 240 282 96 61 chr5 137282851 137283361 -62346789 - L1M4 LINE L1 -1492 4654 4127 881 326 36 30 chr5 137284357 137284891 -62345259 - L1ME LINE L1 -297 5893 5357 336 318 91 44 chr5 137284899 137285283 -62344867 - L1ME LINE L1 -885 5330 4929 824 251 16 0 chr5 137285285 137285476 -62344674 - MIR SINE MIR 0 262 69 610 281 101 46 chr5 137285728 137286472 -62343678 - L1ME LINE L1 -1546 4669 3885 1544 249 36 89 chr5 137286528 137286699 -62343451 - L1MEc LINE L1 -3680 2535 2356 1044 233 65 73 chr5 137286699 137287098 -62343052 + MSTD LTR MaLR 1 396 0 1544 249 36 89 chr5 137287098 137287931 -62342219 - L1MEc LINE L1 -3859 2356 1615 555 320 75 58 chr5 137287946 137289239 -62340911 - L1MEc LINE L1 -5033 1363 49 1527 6 0 0 chr5 137289315 137289487 -62340663 + (TTC)n Simple_repeat Simple_repeat 3 174 0 285 132 84 17 chr5 137289797 137290098 -62340052 + (TA)n Simple_repeat Simple_repeat 1 321 0 7107 58 4 2 chr5 137290192 137291871 -62338279 - L1PA7 LINE L1 0 6154 4471 374 340 80 19 chr5 137291974 137292401 -62337749 - HAL1 LINE L1 -823 1684 1232 331 131 92 31 chr5 137292419 137292499 -62337651 - AluYb8 SINE Alu 0 308 234 2281 103 7 0 chr5 137292589 137292891 -62337259 - AluSp SINE Alu -8 305 2 21 0 0 0 chr5 137293801 137293822 -62336328 + AT_rich Low_complexity Low_complexity 1 21 0 225 196 39 0 chr5 137295116 137295167 -62334983 - HSMAR1 DNA Mariner -1234 53 1 780 243 90 18 chr5 137295415 137295637 -62334513 + MLT1K LTR MaLR 351 588 0 322 349 60 67 chr5 137296381 137296679 -62333471 - L2 LINE L2 -61 3211 2916 180 291 31 47 chr5 137296767 137296894 -62333256 - L2 LINE L2 -568 2746 2622 345 240 20 34 chr5 137297032 137297178 -62332972 - L1MC5 LINE L1 -49 7912 7769 305 152 33 11 chr5 137297276 137297368 -62332782 + (TA)n Simple_repeat Simple_repeat 1 94 0 360 0 0 0 chr5 137297390 137297430 -62332720 + (TG)n Simple_repeat Simple_repeat 2 41 0 1539 213 69 23 chr5 137297441 137297873 -62332277 - L1MC4 LINE L1 -211 7831 7380 462 237 214 9 chr5 137298146 137298361 -62331789 + MIR SINE MIR 3 261 -1 25 0 0 0 chr5 137298420 137298445 -62331705 + AT_rich Low_complexity Low_complexity 1 25 0 2043 138 0 0 chr5 137298451 137298734 -62331416 + AluSx SINE Alu 1 283 -29 357 24 0 0 chr5 137298735 137298777 -62331373 + (TA)n Simple_repeat Simple_repeat 1 42 0 211 269 0 30 chr5 137298962 137299029 -62331121 + GA-rich Low_complexity Low_complexity 3 67 0 2026 129 10 0 chr5 137299298 137299592 -62330558 - AluSg SINE Alu -13 297 1 368 367 71 26 chr5 137300016 137300283 -62329867 - L2 LINE L2 -170 3102 2824 867 233 53 10 chr5 137300329 137300535 -62329615 + MER58A DNA MER1_type 1 215 -9 2380 82 0 0 chr5 137300536 137300828 -62329322 + AluSc SINE Alu 1 292 -17 190 316 45 58 chr5 137301323 137301478 -62328672 - L2 LINE L2 -727 2587 2435 2289 106 0 7 chr5 137301661 137301964 -62328186 + AluSx SINE Alu 1 301 -11 518 293 91 37 chr5 137302347 137302811 -62327339 + MLT1J LTR MaLR 1 489 -22 776 277 231 29 chr5 137305095 137305843 -62324307 - L2 LINE L2 0 3313 2396 321 242 71 20 chr5 137306080 137306179 -62323971 + MIR SINE MIR 115 218 -44 237 191 263 7 chr5 137307655 137307754 -62322396 - MIR SINE MIR -60 148 50 2412 79 10 0 chr5 137309036 137309340 -62320810 + AluY SINE Alu 1 307 -4 1376 174 12 46 chr5 137309533 137309792 -62320358 - AluJo SINE Alu -62 250 1 252 81 0 0 chr5 137309870 137309907 -62320243 + tRNA-Met-e tRNA tRNA 1 37 -38 2321 132 19 21 chr5 137310096 137310522 -62319628 + L1MB7 LINE L1 5724 6157 -27 399 272 92 49 chr5 137310628 137310812 -62319338 + HAL1 LINE L1 1396 1587 -920 1515 67 0 0 chr5 137311494 137311688 -62318462 - L1PA6 LINE L1 -6 6148 5955 521 289 108 73 chr5 137311742 137312334 -62317816 - MLT1L LTR MaLR 0 615 3 262 325 35 9 chr5 137313783 137313897 -62316253 - L3 LINE CR1 -173 1404 1288 933 182 0 25 chr5 137313900 137314081 -62316069 - AluJb SINE Alu 0 314 136 10628 150 8 26 chr5 137314081 137316867 -62313283 - L1PA14 LINE L1 0 6161 3418 573 324 36 6 chr5 137317087 137317312 -62312838 - MIR SINE MIR 0 262 36 1441 324 38 34 chr5 137317409 137318241 -62311909 + L2 LINE L2 2232 3059 -213 30 69 0 0 chr5 137318308 137318366 -62311784 + AT_rich Low_complexity Low_complexity 1 58 0 219 351 105 18 chr5 137318535 137318649 -62311501 + MIR SINE MIR 24 147 -61 856 285 201 27 chr5 137318705 137319112 -62311038 - L3 LINE CR1 -701 876 399 867 291 66 43 chr5 137320167 137320651 -62309499 + MLT1J LTR MaLR 1 495 -16 188 158 0 26 chr5 137320651 137320689 -62309461 - L3 LINE CR1 -1258 319 283 24 0 0 0 chr5 137320889 137320913 -62309237 + AT_rich Low_complexity Low_complexity 1 24 0 2120 159 76 25 chr5 137320919 137321354 -62308796 - MSTB2 LTR MaLR 0 457 1 2361 99 0 10 chr5 137321552 137321866 -62308284 - AluSx SINE Alu -1 311 1 5830 109 7 21 chr5 137321886 137322652 -62307498 + L1PA16 LINE L1 4637 5377 -789 2222 91 10 7 chr5 137322652 137322949 -62307201 + AluSx SINE Alu 1 298 -14 5830 109 7 21 chr5 137322949 137323720 -62306430 + L1PA16 LINE L1 5377 6157 -9 32 0 0 0 chr5 137323725 137323757 -62306393 + AT_rich Low_complexity Low_complexity 1 32 0 414 0 0 0 chr5 137326838 137326884 -62303266 + (TG)n Simple_repeat Simple_repeat 2 47 0 1930 153 150 3 chr5 137327026 137327399 -62302751 + MSTC LTR MaLR 1 428 0 408 258 31 25 chr5 137328449 137328612 -62301538 - L1MC4a LINE L1 -1845 5963 5800 2008 150 83 3 chr5 137329298 137329671 -62300479 - MSTA LTR MaLR 0 428 26 364 278 86 39 chr5 137330609 137330864 -62299286 + L1ME4a LINE L1 5851 6117 -4 4873 180 115 47 chr5 137331291 137333523 -62296627 - L1MB1 LINE L1 -2 7585 5193 * 36931 79 10 9 chr5 137333514 137339657 -62290493 - L1PA6 LINE L1 -1 6153 11 5056 233 61 20 chr5 137339675 137341775 -62288375 - L1MB1 LINE L1 -2456 5109 2923 392 221 10 29 chr5 137341805 137341909 -62288241 - L1MB1 LINE L1 -5786 1700 1599 474 343 28 36 chr5 137342514 137342765 -62287385 + MLT1K LTR MaLR 15 263 -325 330 290 130 0 chr5 137342880 137342980 -62287170 + MER81 DNA DNA 2 114 0 833 208 12 12 chr5 137344143 137344311 -62285839 + FAM SINE Alu 4 171 -4 306 351 131 0 chr5 137344497 137344673 -62285477 - MIR SINE MIR -11 197 1 295 289 20 47 chr5 137345294 137345443 -62284707 + LTR16B LTR ERVL 319 463 -1 185 260 0 0 chr5 137345959 137346009 -62284141 + MIR SINE MIR 139 188 -74 609 234 156 0 chr5 137346017 137346171 -62283979 + MER5A DNA MER1_type 9 186 -3 272 300 0 14 chr5 137346185 137346255 -62283895 + MIR SINE MIR 194 262 0 188 216 0 78 chr5 137346318 137346369 -62283781 + MIR SINE MIR 118 164 -98 228 154 0 77 chr5 137346371 137346423 -62283727 + L3 LINE CR1 1525 1572 -5 848 287 30 4 chr5 137346443 137346680 -62283470 - MIR SINE MIR -2 260 18 299 299 40 90 chr5 137346801 137346978 -62283172 - MER5B DNA MER1_type -4 174 7 186 133 0 0 chr5 137347069 137347099 -62283051 + (GGGA)n Simple_repeat Simple_repeat 1 30 0 1168 134 37 0 chr5 137350256 137350443 -62279707 - AluSg/x SINE Alu 0 312 119 1534 180 50 18 chr5 137350815 137351093 -62279057 + AluJo SINE Alu 2 288 -24 666 241 70 0 chr5 137351172 137351371 -62278779 + HAL1 LINE L1 1441 1653 -854 1127 247 90 93 chr5 137351923 137352749 -62277401 + HAL1 LINE L1 1664 2486 -21 5236 94 109 0 chr5 137353433 137354178 -62275972 - LTR12 LTR ERV1 0 826 1 623 96 23 1 chr5 137354488 137354592 -62275558 + LTR12 LTR ERV1 86 1825 -548 1322 232 45 14 chr5 137354875 137355370 -62274780 + MLT2F LTR ERVL 5 596 -67 228 319 111 5 chr5 137355621 137355671 -62274479 - HAL1 LINE L1 -884 1623 1580 1885 168 0 7 chr5 137355671 137355968 -62274182 - AluJb SINE Alu -17 295 1 228 319 111 5 chr5 137355968 137356124 -62274026 - HAL1 LINE L1 -927 1580 1395 235 108 0 0 chr5 137356184 137356221 -62273929 - MLT2F LTR ERVL -10 653 617 469 291 123 33 chr5 137356430 137356793 -62273357 + L1MEc LINE L1 2179 2537 -3678 1566 180 7 27 chr5 137357575 137357870 -62272280 - AluJo SINE Alu -21 291 3 514 250 166 30 chr5 137357910 137358565 -62271585 + L1MEc LINE L1 2883 3626 -2589 872 159 0 0 chr5 137358568 137358718 -62271432 - FRAM SINE Alu 0 172 23 330 294 50 54 chr5 137358803 137359024 -62271126 - L1M4 LINE L1 -973 5173 4954 1688 223 11 3 chr5 137359051 137359433 -62270717 - MER63C DNA MER1_type -26 904 520 986 189 21 0 chr5 137359442 137359633 -62270517 + MER58A DNA MER1_type 14 208 -16 242 258 0 0 chr5 137359638 137359700 -62270450 - MER63C DNA MER1_type -404 526 465 10330 210 18 20 chr5 137360121 137362041 -62268109 + L1 LINE L1 1306 3427 -2719 2462 84 0 7 chr5 137362041 137362351 -62267799 + AluY SINE Alu 1 308 -3 10330 210 18 20 chr5 137362351 137363709 -62266441 + L1 LINE L1 3427 4787 -1359 3410 148 19 8 chr5 137366629 137367611 -62262539 + L1P5 LINE L1 4785 5777 -374 306 0 0 0 chr5 137367611 137367645 -62262505 + (TG)n Simple_repeat Simple_repeat 2 35 0 3410 148 19 8 chr5 137367645 137367661 -62262489 + L1P5 LINE L1 5777 5791 -360 655 33 56 0 chr5 137367670 137367760 -62262390 + L1PB1 LINE L1 6056 6150 -1 1333 214 47 30 chr5 137367792 137368198 -62261952 - MER63C DNA MER1_type -469 461 49 487 311 71 38 chr5 137368546 137369368 -62260782 - L1M4 LINE L1 -1314 4832 3984 1367 208 107 59 chr5 137369368 137369845 -62260305 + MLT1D LTR MaLR 1 500 -5 473 320 39 34 chr5 137369903 137370287 -62259863 - L1M4 LINE L1 -2217 3929 3544 296 106 75 0 chr5 137370445 137370539 -62259611 + (TA)n Simple_repeat Simple_repeat 2 102 0 1497 193 67 4 chr5 137370541 137370811 -62259339 - AluJo SINE Alu -25 287 1 1030 285 89 47 chr5 137370870 137371467 -62258683 - L1M4 LINE L1 -2843 3303 2682 1791 165 31 9 chr5 137371551 137371878 -62258272 + MER7A DNA MER2_type 14 345 -1 415 324 48 41 chr5 137371989 137372428 -62257722 - HAL1b LINE L1 -846 502 61 566 298 64 45 chr5 137373463 137374824 -62255326 + L1ME LINE L1 4057 5437 -684 1814 183 49 15 chr5 137374832 137375501 -62254649 + L1MC1 LINE L1 4561 5291 -855 6590 169 17 21 chr5 137375535 137376397 -62253753 + L1PA11 LINE L1 1 865 -6747 318 50 0 0 chr5 137376397 137376437 -62253713 + (TG)n Simple_repeat Simple_repeat 2 41 0 6590 169 17 21 chr5 137376437 137376561 -62253589 + L1PA11 LINE L1 865 988 -6624 2825 16 0 0 chr5 137376561 137376870 -62253280 - AluYb8 SINE Alu -9 309 1 6590 169 17 21 chr5 137376870 137379595 -62250555 + L1PA11 LINE L1 988 3721 -3891 2044 144 0 0 chr5 137379595 137379873 -62250277 + AluSc SINE Alu 1 278 -31 1971 100 4 11 chr5 137379873 137380143 -62250007 + AluSp SINE Alu 41 308 -5 6590 169 17 21 chr5 137380143 137381330 -62248820 + L1PA11 LINE L1 3720 4910 -2702 2191 134 0 6 chr5 137381330 137381643 -62248507 - AluSx SINE Alu -1 311 1 6590 169 17 21 chr5 137381643 137383400 -62246750 + L1PA11 LINE L1 4910 7612 0 750 222 67 17 chr5 137383436 137383616 -62246534 + AluJb SINE Alu 120 308 -4 4974 157 24 47 chr5 137383617 137383639 -62246511 + L1MC1 LINE L1 5304 5325 -1008 1977 166 0 0 chr5 137383639 137383924 -62246226 + AluSx SINE Alu 1 288 -24 198 0 0 0 chr5 137383924 137383946 -62246204 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 4974 157 24 47 chr5 137383955 137384424 -62245726 + L1MC1 LINE L1 5325 5803 -530 2540 167 32 0 chr5 137384424 137384867 -62245283 + MSTB2 LTR MaLR 1 457 0 4974 157 24 47 chr5 137384867 137385110 -62245040 + L1MC1 LINE L1 5803 6050 -283 2318 89 3 0 chr5 137385110 137385401 -62244749 - AluSp SINE Alu -18 295 4 4974 157 24 47 chr5 137385401 137385718 -62244432 + L1MC1 LINE L1 6050 6333 0 187 75 0 50 chr5 137386479 137386519 -62243631 + (TAGA)n Simple_repeat Simple_repeat 3 40 0 451 297 104 70 chr5 137386723 137387097 -62243053 - L2 LINE L2 -357 2957 2571 764 175 76 64 chr5 137387720 137387891 -62242259 - MER5B DNA MER1_type -3 175 3 4710 151 27 55 chr5 137388052 137388644 -62241506 + L1MA9 LINE L1 5215 5822 -490 2360 97 0 0 chr5 137388644 137388954 -62241196 + AluY SINE Alu 1 310 -1 4710 151 27 55 chr5 137388954 137389115 -62241035 + L1MA9 LINE L1 5822 5986 -326 2480 108 101 0 chr5 137389115 137389503 -62240647 + MSTA LTR MaLR 1 427 -1 4710 151 27 55 chr5 137389503 137389866 -62240284 + L1MA9 LINE L1 5986 6307 -5 3111 50 3 0 chr5 137389943 137390327 -62239823 - L1PA5 LINE L1 0 6154 5770 221 56 0 28 chr5 137390328 137390364 -62239786 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 6478 28 2 0 chr5 137390364 137391161 -62238989 - L1PA4 LINE L1 -24 6131 5333 2267 184 47 11 chr5 137391542 137391993 -62238157 - MLT1C LTR MaLR 0 467 1 21 82 0 0 chr5 137392672 137392721 -62237429 + AT_rich Low_complexity Low_complexity 1 49 0 180 0 0 0 chr5 137394212 137394232 -62235918 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 258 31 0 0 chr5 137394537 137394569 -62235581 - L1M4 LINE L1 -580 5594 5563 759 150 60 4 chr5 137394607 137394842 -62235308 - L1M4 LINE L1 -735 5439 5207 2106 199 48 40 chr5 137394891 137395271 -62234879 - L1MDa LINE L1 -4989 1551 1176 1630 166 17 37 chr5 137395271 137395567 -62234583 + AluJo SINE Alu 6 295 -17 2106 199 48 40 chr5 137395567 137395835 -62234315 - L1MDa LINE L1 -5364 1176 587 267 244 0 13 chr5 137395970 137396048 -62234102 - L1MDa LINE L1 -6143 397 321 682 294 189 6 chr5 137396065 137396388 -62233762 + L1MEc LINE L1 133 514 -5882 3757 231 100 30 chr5 137396411 137398006 -62232144 + L1MEc LINE L1 578 2285 -4111 409 224 73 31 chr5 137397984 137398176 -62231974 - L1M4 LINE L1 -3486 2660 2461 * 198 0 0 0 chr5 137398203 137398225 -62231925 + (A)n Simple_repeat Simple_repeat 1 22 0 344 253 101 34 chr5 137398382 137398560 -62231590 - MLT1K LTR MaLR -21 567 378 261 237 21 65 chr5 137398677 137398770 -62231380 - MLT1K LTR MaLR -390 198 110 1929 158 12 6 chr5 137399013 137399349 -62230801 + L1MB5 LINE L1 5837 6174 0 235 275 13 141 chr5 137401303 137401452 -62228698 + L2 LINE L2 3142 3271 -1 417 303 38 43 chr5 137401672 137401857 -62228293 + MIR3 SINE MIR 18 201 -7 531 222 62 0 chr5 137402597 137402741 -62227409 - MER69B DNA AcHobo -1 1225 1073 1103 30 15 0 chr5 137402742 137402875 -62227275 + BC200 scRNA scRNA 1 135 -65 2388 183 41 8 chr5 137402875 137403367 -62226783 - MER69B DNA AcHobo -143 1083 576 2070 159 8 6 chr5 137403375 137403733 -62226417 + L1MB3 LINE L1 5650 6008 -175 549 170 0 10 chr5 137403732 137403832 -62226318 - L1MB2 LINE L1 -194 5977 5879 * 909 159 25 6 chr5 137403832 137403984 -62226166 + L1MB3 LINE L1 6014 6173 -10 1754 296 65 7 chr5 137403998 137404553 -62225597 - MER69B DNA AcHobo -639 587 1 32 26 0 0 chr5 137405020 137405059 -62225091 + AT_rich Low_complexity Low_complexity 1 39 0 925 249 82 103 chr5 137405110 137405607 -62224543 - MLT1J LTR MaLR 0 511 25 1742 139 235 23 chr5 137405788 137405827 -62224323 - MSTA LTR MaLR 0 428 399 2298 89 7 20 chr5 137405827 137406130 -62224020 + AluSq SINE Alu 1 299 -14 420 71 0 0 chr5 137406131 137406187 -62223963 + (TA)n Simple_repeat Simple_repeat 1 56 0 1742 139 235 23 chr5 137406187 137406358 -62223792 - MSTA LTR MaLR -29 399 266 339 44 0 0 chr5 137406358 137406403 -62223747 + (GA)n Simple_repeat Simple_repeat 2 46 0 1742 139 235 23 chr5 137406403 137406542 -62223608 - MSTA LTR MaLR -162 266 1 227 340 207 9 chr5 137408047 137408780 -62221370 + L2 LINE L2 1772 2649 -665 338 242 83 167 chr5 137408978 137409230 -62220920 + L2 LINE L2 2931 3144 -128 714 209 86 6 chr5 137409230 137409393 -62220757 + MER69A DNA AcHobo 1 176 -1 338 242 83 167 chr5 137409393 137409512 -62220638 + L2 LINE L2 3144 3271 -1 24 53 0 0 chr5 137410512 137410550 -62219600 + AT_rich Low_complexity Low_complexity 1 38 0 10221 36 0 8 chr5 137410946 137412886 -62217264 - L1PA4 LINE L1 -3 6152 4219 3834 331 54 30 chr5 137413358 137413746 -62216404 - ERVL LTR ERVL -44 5326 4949 2330 70 0 10 chr5 137413746 137414047 -62216103 + AluY SINE Alu 1 298 -13 3834 331 54 30 chr5 137414047 137414329 -62215821 - ERVL LTR ERVL -421 4949 4675 2639 119 5 24 chr5 137414329 137414700 -62215450 + THE1B LTR MaLR 1 364 0 10775 110 39 39 chr5 137414700 137416281 -62213869 + THE1B-int LTR MaLR 1 1580 0 2799 110 3 3 chr5 137416281 137416645 -62213505 + THE1B LTR MaLR 1 364 0 3834 331 54 30 chr5 137416645 137417996 -62212154 - ERVL LTR ERVL -695 4675 3358 1991 173 58 24 chr5 137417996 137418377 -62211773 - MSTD LTR MaLR 0 396 3 3834 331 54 30 chr5 137418377 137421428 -62208722 - ERVL LTR ERVL -2012 3358 3 1149 251 145 58 chr5 137421430 137421857 -62208293 - LTR16B LTR ERVL 0 464 1 2197 136 7 0 chr5 137423197 137423507 -62206643 + AluJb SINE Alu 1 312 0 5638 165 26 15 chr5 137423508 137425480 -62204670 - L1PA16 LINE L1 -13 6153 4133 2031 279 119 33 chr5 137425498 137426373 -62203777 - L2 LINE L2 0 3313 2290 1978 152 20 3 chr5 137426373 137426676 -62203474 + AluSx SINE Alu 1 308 -4 2031 279 119 33 chr5 137426676 137427137 -62203013 - L2 LINE L2 -1023 2290 1870 44688 42 1 1 chr5 137427504 137433655 -62196495 + L1PA3 LINE L1 2 6152 -3 24 32 0 0 chr5 137433964 137433995 -62196155 + AT_rich Low_complexity Low_complexity 1 31 0 360 332 160 43 chr5 137434746 137435713 -62194437 - L2 LINE L2 0 3272 2185 337 291 19 18 chr5 137436130 137436247 -62193903 - MIR SINE MIR -62 146 32 2619 48 0 13 chr5 137437027 137437340 -62192810 + AluY SINE Alu 1 309 -2 183 42 0 0 chr5 137439765 137439789 -62190361 + (GA)n Simple_repeat Simple_repeat 1 24 0 466 248 70 0 chr5 137440671 137440800 -62189350 - MIR SINE MIR -49 213 76 607 256 26 62 chr5 137441005 137441232 -62188918 - LTR16A1 LTR ERVL -14 443 225 275 353 102 21 chr5 137441635 137441822 -62188328 + MIR SINE MIR 59 260 -2 647 279 130 14 chr5 137442528 137442736 -62187414 + MIR SINE MIR 21 252 -10 201 274 0 0 chr5 137442832 137442883 -62187267 + L2 LINE L2 3262 3312 -1 2174 127 0 0 chr5 137443245 137443544 -62186606 + AluSx SINE Alu 1 299 -13 2159 133 13 46 chr5 137444150 137444541 -62185609 - MLT1B LTR MaLR -6 384 7 2296 217 81 49 chr5 137446270 137447087 -62183063 - Charlie7 DNA MER1_type 0 2612 1770 573 231 65 6 chr5 137447127 137447296 -62182854 + MIR SINE MIR 53 231 -31 666 207 99 31 chr5 137447300 137447522 -62182628 - Charlie7 DNA MER1_type -868 1744 1508 250 354 21 28 chr5 137447579 137447723 -62182427 - Charlie7 DNA MER1_type -2287 325 183 485 307 270 15 chr5 137447960 137448367 -62181783 - L3 LINE CR1 -51 1526 1016 2022 102 65 0 chr5 137448655 137448930 -62181220 + AluSg SINE Alu 1 293 -17 278 259 38 76 chr5 137448984 137449115 -62181035 + MIR SINE MIR 70 195 -67 217 263 132 13 chr5 137449788 137449864 -62180286 - L2 LINE L2 0 3313 3229 401 273 67 24 chr5 137450007 137450172 -62179978 - LTR67 LTR ERVL -3 554 383 229 317 61 12 chr5 137450338 137450420 -62179730 - LTR67 LTR ERVL -325 232 147 307 263 73 58 chr5 137450711 137450848 -62179302 + MIR3 SINE MIR 13 151 -57 318 98 0 0 chr5 137451948 137451999 -62178151 + (CA)n Simple_repeat Simple_repeat 2 52 0 207 88 0 0 chr5 137454130 137454164 -62175986 + (CCCCCA)n Simple_repeat Simple_repeat 1 34 0 372 75 94 0 chr5 137454169 137454222 -62175928 - L1P4 LINE L1 -529 5637 5580 5487 113 16 6 chr5 137454490 137455293 -62174857 - L1PA16 LINE L1 0 6166 5356 1979 182 53 31 chr5 137455428 137455884 -62174266 + MLT1C LTR MaLR 2 467 0 330 237 99 79 chr5 137456272 137456525 -62173625 + L2 LINE L2 2805 3062 -210 215 191 0 32 chr5 137457255 137457318 -62172832 + (TA)n Simple_repeat Simple_repeat 2 62 0 2297 110 0 0 chr5 137457477 137457786 -62172364 + AluSx SINE Alu 1 309 -3 2137 130 3 0 chr5 137457803 137458103 -62172047 + AluSq SINE Alu 5 305 -8 278 263 26 97 chr5 137458795 137458909 -62171241 + MIR SINE MIR 117 222 -40 2004 114 48 0 chr5 137460526 137460834 -62169316 - AluSq SINE Alu 0 313 2 507 269 194 0 chr5 137462099 137462285 -62167865 + MIR SINE MIR 35 256 -6 211 267 171 66 chr5 137462306 137462699 -62167451 + L2 LINE L2 2544 2977 -337 23 33 0 0 chr5 137464883 137464913 -62165237 + AT_rich Low_complexity Low_complexity 1 30 0 421 338 43 7 chr5 137465537 137465676 -62164474 + L2 LINE L2 3107 3250 -22 216 271 171 29 chr5 137466880 137466950 -62163200 + MIR3 SINE MIR 112 191 -17 1914 299 140 26 chr5 137469802 137470685 -62159465 + L2 LINE L2 1974 2957 -357 350 328 56 8 chr5 137470811 137470936 -62159214 + L2 LINE L2 3181 3311 -2 245 293 120 47 chr5 137470938 137471088 -62159062 + L2 LINE L2 2597 2757 -557 441 190 147 26 chr5 137475758 137475874 -62154276 - L2 LINE L2 -12 3301 3172 206 333 64 28 chr5 137476014 137476155 -62153995 - L2 LINE L2 -343 2971 2826 2278 93 27 0 chr5 137476594 137476895 -62153255 - AluSp SINE Alu -4 309 1 1938 169 3 6 chr5 137477000 137477313 -62152837 - AluJb SINE Alu 0 312 1 3470 170 12 68 chr5 137478171 137478346 -62151804 + MER82 DNA MER2_type 14 197 -456 2647 106 38 0 chr5 137478346 137478713 -62151437 + L1PA15 LINE L1 5782 6162 -3 3470 170 12 68 chr5 137478713 137479214 -62150936 + MER82 DNA MER2_type 197 652 -1 2514 115 19 25 chr5 137480079 137480445 -62149705 + THE1B LTR MaLR 1 364 0 319 298 257 23 chr5 137480505 137480723 -62149427 - MLT1K LTR MaLR -318 270 2 1848 49 0 0 chr5 137481388 137481613 -62148537 - L1PA6 LINE L1 -1392 4754 4530 5251 48 0 0 chr5 137481614 137482517 -62147633 + L1PA6 LINE L1 4746 5648 -506 4149 62 0 0 chr5 137482821 137483317 -62146833 + L1PA6 LINE L1 5651 6146 -8 234 176 15 29 chr5 137483336 137483404 -62146746 + A-rich Low_complexity Low_complexity 5 71 0 549 233 62 34 chr5 137486023 137486199 -62143951 - MIR3 SINE MIR -14 194 14 746 194 73 0 chr5 137486288 137486412 -62143738 + FLAM_A SINE Alu 1 133 0 1839 209 183 75 chr5 137486501 137487091 -62143059 + MLT1E1 LTR MaLR 1 654 0 434 323 98 33 chr5 137487107 137487537 -62142613 - L2 LINE L2 -44 3228 2775 405 0 0 0 chr5 137488467 137488512 -62141638 + (TG)n Simple_repeat Simple_repeat 2 46 0 185 331 83 83 chr5 137490300 137490675 -62139475 - L2 LINE L2 -711 2603 2229 391 265 20 39 chr5 137490873 137490975 -62139175 - L2 LINE L2 -39 3274 3175 2161 174 89 30 chr5 137491117 137491589 -62138561 + MLT1D LTR MaLR 6 505 0 859 126 0 15 chr5 137491843 137491978 -62138172 + FLAM_C SINE Alu 1 133 0 22 0 0 0 chr5 137492401 137492423 -62137727 + AT_rich Low_complexity Low_complexity 1 22 0 329 286 20 40 chr5 137494830 137495001 -62135149 - MIR SINE MIR -58 204 42 771 96 19 173 chr5 137496249 137496405 -62133745 + FLAM_C SINE Alu 1 132 -1 279 264 87 87 chr5 137496441 137496683 -62133467 + L2 LINE L2 2581 2822 -492 222 301 53 60 chr5 137496780 137496913 -62133237 + L2 LINE L2 2967 3098 -174 387 0 0 0 chr5 137496920 137496963 -62133187 + (TCTA)n Simple_repeat Simple_repeat 2 44 0 2332 125 41 33 chr5 137496971 137497335 -62132815 - L1MB8 LINE L1 -11 6167 5798 180 0 0 0 chr5 137497335 137497355 -62132795 + (TAA)n Simple_repeat Simple_repeat 1 20 0 2332 125 41 33 chr5 137497355 137497381 -62132769 - L1MB8 LINE L1 -380 5798 5774 1055 123 37 37 chr5 137497381 137497568 -62132582 - L1MB8 LINE L1 -285 5893 5707 183 309 0 0 chr5 137497712 137497754 -62132396 + L2 LINE L2 3231 3272 0 300 341 28 28 chr5 137498106 137498282 -62131868 - MER5B DNA MER1_type -1 177 2 21 0 0 0 chr5 137498303 137498324 -62131826 + AT_rich Low_complexity Low_complexity 1 21 0 397 222 95 24 chr5 137498482 137498608 -62131542 + MIR SINE MIR 80 214 -48 2216 101 0 7 chr5 137499669 137499993 -62130157 + AluSq SINE Alu 1 313 0 988 106 121 0 chr5 137499996 137500137 -62130013 + AluSg/x SINE Alu 139 296 -14 419 358 42 0 chr5 137500264 137500429 -62129721 + MIR SINE MIR 35 206 -56 270 294 66 6 chr5 137500986 137501110 -62129040 + MIR SINE MIR 60 188 -62 281 323 38 23 chr5 137501520 137501653 -62128497 - MIR SINE MIR -88 174 40 2228 132 0 0 chr5 137501653 137501957 -62128193 + AluSx SINE Alu 1 304 -8 1877 151 0 0 chr5 137502299 137502577 -62127573 + AluSx SINE Alu 1 278 -34 258 176 0 0 chr5 137502582 137502633 -62127517 + GA-rich Low_complexity Low_complexity 1 51 0 2259 62 22 0 chr5 137504122 137504398 -62125752 + AluY SINE Alu 1 305 0 187 43 0 0 chr5 137504398 137504421 -62125729 + (GAAAA)n Simple_repeat Simple_repeat 2 165 0 312 317 0 0 chr5 137507445 137507549 -62122601 + (TATATG)n Simple_repeat Simple_repeat 5 108 0 281 265 104 114 chr5 137507738 137507818 -62122332 - L2 LINE L2 -60 3212 3133 957 208 94 0 chr5 137507818 137508010 -62122140 - MER63A DNA MER1_type 0 210 1 281 265 104 114 chr5 137508010 137508322 -62121828 - L2 LINE L2 -139 3133 2824 426 258 142 62 chr5 137508375 137508600 -62121550 + MIR SINE MIR 9 251 -11 480 243 0 61 chr5 137508709 137508787 -62121363 - MER112 DNA MER1_type -19 241 175 2102 136 7 3 chr5 137508787 137509089 -62121061 + AluSx SINE Alu 1 303 -9 480 243 0 61 chr5 137509089 137509158 -62120992 - MER112 DNA MER1_type -85 175 103 408 20 0 0 chr5 137509460 137509509 -62120641 + (TG)n Simple_repeat Simple_repeat 1 49 0 1634 138 109 13 chr5 137510106 137510418 -62119732 + L1MC1 LINE L1 5992 6333 0 182 273 45 45 chr5 137510787 137510875 -62119275 - L3 LINE CR1 -46 1531 1444 940 181 191 0 chr5 137510911 137511110 -62119040 + MER8 DNA MER2_type 3 239 0 4802 237 102 19 chr5 137512662 137513552 -62116598 + L2 LINE L2 852 1912 -1402 622 177 54 7 chr5 137513552 137513699 -62116451 - L1MA10 LINE L1 -2 6332 6179 4802 237 102 19 chr5 137513699 137514270 -62115880 + L2 LINE L2 1912 2434 -880 2345 101 0 0 chr5 137514548 137514845 -62115305 - AluSq SINE Alu -16 297 1 226 150 0 0 chr5 137515201 137515241 -62114909 - HAL1 LINE L1 -198 2309 2270 180 0 0 0 chr5 137515312 137515332 -62114818 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 260 267 20 75 chr5 137515400 137515546 -62114604 - HAL1b LINE L1 -437 911 774 572 270 58 18 chr5 137516179 137516689 -62113461 - HAL1 LINE L1 -860 1647 1066 2200 61 45 48 chr5 137516733 137517045 -62113105 - AluY SINE Alu 0 311 1 1781 176 3 3 chr5 137517072 137517367 -62112783 - AluJo SINE Alu -17 295 1 24 32 0 0 chr5 137517375 137517406 -62112744 + AT_rich Low_complexity Low_complexity 1 31 0 242 297 34 25 chr5 137517741 137517859 -62112291 - L1ME LINE L1 -285 5885 5767 649 286 114 32 chr5 137517923 137518762 -62111388 - L1ME LINE L1 -371 5791 4865 245 390 0 8 chr5 137518935 137519053 -62111097 - MIR3 SINE MIR -36 172 56 2104 131 3 22 chr5 137519055 137519369 -62110781 + AluSx SINE Alu 3 310 -2 240 111 0 0 chr5 137519373 137519418 -62110732 + (CAAAAA)n Simple_repeat Simple_repeat 2 46 0 478 297 121 61 chr5 137519500 137519618 -62110532 - L1MC/D LINE L1 -754 5392 5282 728 174 0 58 chr5 137519618 137519756 -62110394 - FLAM_A SINE Alu -3 130 1 478 297 121 61 chr5 137519756 137520489 -62109661 - L1MC/D LINE L1 -864 5282 4673 328 290 206 20 chr5 137520538 137520980 -62109170 - L1MC/D LINE L1 -1556 4590 4067 4741 161 24 33 chr5 137521507 137522437 -62107713 + L1MC3 LINE L1 6864 7784 -1 339 213 0 38 chr5 137522639 137522719 -62107431 + L3b LINE CR1 1290 1366 -217 23 0 0 0 chr5 137523494 137523517 -62106633 + AT_rich Low_complexity Low_complexity 1 23 0 427 220 68 25 chr5 137524977 137525095 -62105055 + MIR3 SINE MIR 73 195 -13 204 40 0 0 chr5 137525111 137525136 -62105014 + (TG)n Simple_repeat Simple_repeat 2 26 0 2158 125 37 20 chr5 137525159 137525510 -62104640 + MER46B DNA MER2_type 3 234 -2 420 20 0 0 chr5 137525510 137525559 -62104591 + (TG)n Simple_repeat Simple_repeat 2 50 0 421 305 48 32 chr5 137525671 137525858 -62104292 + MIR SINE MIR 73 262 0 341 288 14 50 chr5 137527813 137527952 -62102198 - MIR SINE MIR -12 250 117 2189 184 114 32 chr5 137528461 137529067 -62101083 + L1ME2 LINE L1 5517 6333 -1 387 0 0 0 chr5 137529606 137529649 -62100501 + (T)n Simple_repeat Simple_repeat 1 43 0 770 100 18 0 chr5 137529679 137529789 -62100361 - L1PB1 LINE L1 -1 6150 6039 245 281 24 37 chr5 137529908 137529990 -62100160 - MER5B DNA MER1_type -15 163 83 347 217 87 17 chr5 137530037 137530114 -62100036 - L1MC5 LINE L1 -57 7904 7815 2288 87 0 0 chr5 137530114 137530400 -62099750 + AluSq SINE Alu 1 286 -27 347 217 87 17 chr5 137530400 137530437 -62099713 - L1MC5 LINE L1 -146 7815 7782 228 281 18 18 chr5 137530456 137530513 -62099637 + MER58 DNA MER1_type 3 59 -165 2569 142 45 19 chr5 137530514 137531292 -62098858 - L1MB7 LINE L1 -19 6165 5281 1619 143 71 0 chr5 137531292 137531558 -62098592 - AluSg SINE Alu -25 285 1 2569 142 45 19 chr5 137531558 137531844 -62098306 - L1MB7 LINE L1 -903 5281 5004 935 192 62 0 chr5 137532395 137532572 -62097578 - MER5A DNA MER1_type 0 189 2 2145 128 6 6 chr5 137532779 137533091 -62097059 - AluSx SINE Alu 0 312 1 183 80 0 0 chr5 137533170 137533195 -62096955 + (T)n Simple_repeat Simple_repeat 1 25 0 2509 72 0 0 chr5 137533875 137534182 -62095968 + AluY SINE Alu 5 311 0 189 0 0 0 chr5 137534949 137534970 -62095180 + (A)n Simple_repeat Simple_repeat 1 21 0 2875 13 3 3 chr5 137536583 137536900 -62093250 - AluYb8 SINE Alu -1 317 1 2362 91 0 16 chr5 137537650 137537958 -62092192 - AluSc SINE Alu -6 303 1 1008 104 61 0 chr5 137538052 137538215 -62091935 - L1MA6 LINE L1 0 6300 6128 345 240 111 44 chr5 137540293 137540570 -62089580 + L1MA1 LINE L1 5580 5814 -307 285 357 54 9 chr5 137541912 137542024 -62088126 + L2 LINE L2 3137 3253 -19 2497 81 3 0 chr5 137542370 137542679 -62087471 + AluSp SINE Alu 1 310 -3 811 220 139 52 chr5 137542855 137543079 -62087071 - MER102b DNA MER1_type -1089 339 79 2292 92 3 3 chr5 137543079 137543372 -62086778 - AluSc SINE Alu -16 293 1 811 220 139 52 chr5 137543372 137543456 -62086694 - MER102b DNA MER1_type -1349 79 4 383 299 97 24 chr5 137545301 137545508 -62084642 + MIR SINE MIR 1 222 -40 2363 62 3 29 chr5 137548170 137548478 -62081672 - AluSc SINE Alu -9 300 1 1665 121 4 0 chr5 137549654 137549894 -62080256 + MLT2C2 LTR ERVL 11 251 -213 621 221 35 23 chr5 137549894 137550066 -62080084 + L1MB1 LINE L1 6002 6175 -14 1154 174 0 0 chr5 137550076 137550266 -62079884 + MLT2C2 LTR ERVL 235 472 -48 510 188 21 0 chr5 137550656 137550752 -62079398 + L1MD3 LINE L1 7888 7985 -10 233 244 22 67 chr5 137551525 137551615 -62078535 + HAL1 LINE L1 2422 2507 0 1564 156 4 0 chr5 137551744 137551982 -62078168 + AluJo SINE Alu 44 282 -30 471 18 0 0 chr5 137551987 137552043 -62078107 + (CTA)n Simple_repeat Simple_repeat 1 56 0 2208 105 0 45 chr5 137552545 137552679 -62077471 + AluSx SINE Alu 1 139 -173 7873 46 0 0 chr5 137552679 137554263 -62075887 + L1PA6 LINE L1 4571 6153 -1 2208 105 0 45 chr5 137554263 137554441 -62075709 + AluSx SINE Alu 139 299 -13 2549 49 0 3 chr5 137555470 137555775 -62074375 - AluY SINE Alu -7 304 1 2513 224 29 13 chr5 137556618 137557231 -62072919 + L1ME1 LINE L1 5539 6161 -5 2144 153 34 27 chr5 137557351 137557900 -62072250 - MLT2A2 LTR ERVL 0 554 2 194 374 29 23 chr5 137558921 137559095 -62071055 - L2 LINE L2 -1304 2010 1836 435 277 85 16 chr5 137559418 137559606 -62070544 + L1MC4a LINE L1 5724 5924 -1884 180 206 0 0 chr5 137560010 137560044 -62070106 - L2 LINE L2 -211 3061 3028 32 101 0 0 chr5 137562665 137562774 -62067376 + AT_rich Low_complexity Low_complexity 1 109 0 612 61 0 1 chr5 137563390 137563635 -62066515 - AluY SINE Alu 0 311 35 2326 103 0 0 chr5 137563661 137563953 -62066197 + AluSg SINE Alu 1 292 -18 853 256 128 19 chr5 137564150 137564470 -62065680 + L2 LINE L2 2335 2689 -625 210 339 76 8 chr5 137565711 137565829 -62064321 + L2 LINE L2 3146 3271 -1 2247 26 44 4 chr5 137565901 137566174 -62063976 + AluY SINE Alu 1 284 -27 1961 46 8 0 chr5 137566174 137566414 -62063736 + AluY SINE Alu 1 242 -69 180 306 56 56 chr5 137567728 137567836 -62062314 + L2 LINE L2 3146 3253 -19 2296 116 3 0 chr5 137567837 137568139 -62062011 - AluSx SINE Alu -9 303 1 925 215 43 53 chr5 137568423 137568624 -62061526 - Charlie7 DNA MER1_type -6 2606 2409 2259 93 10 3 chr5 137568624 137568925 -62061225 + AluSx SINE Alu 1 303 -9 925 215 43 53 chr5 137568925 137569118 -62061032 - Charlie7 DNA MER1_type -203 2409 2216 * 3971 215 103 61 chr5 137569115 137570887 -62059263 - Charlie7 DNA MER1_type -732 1880 35 468 0 0 0 chr5 137571584 137571636 -62058514 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 187 342 114 13 chr5 137572662 137572811 -62057339 - MIR3 SINE MIR -5 203 40 1312 148 154 48 chr5 137573418 137573750 -62056400 + L1MB2 LINE L1 5796 6162 -9 24 0 0 0 chr5 137573750 137573774 -62056376 + AT_rich Low_complexity Low_complexity 1 24 0 5093 147 39 15 chr5 137576401 137577827 -62052323 + L1MA5A LINE L1 4791 6296 -1 2802 161 55 13 chr5 137578428 137578956 -62051194 + MER44D DNA MER2_type 1 605 0 21 0 0 0 chr5 137578993 137579014 -62051136 + AT_rich Low_complexity Low_complexity 1 21 0 7020 42 14 13 chr5 137579028 137579975 -62050175 + L1PA6 LINE L1 5203 6150 -4 1503 131 175 13 chr5 137580112 137580426 -62049724 - MER47A DNA MER2_type 0 366 2 180 179 0 0 chr5 137580652 137580691 -62049459 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 1053 263 56 35 chr5 137580697 137580792 -62049358 - L2 LINE L2 -79 3234 3142 2209 119 0 0 chr5 137580792 137581116 -62049034 + AluSx SINE Alu 1 312 0 1053 263 56 35 chr5 137581116 137581503 -62048647 - L2 LINE L2 -171 3142 2740 305 286 63 40 chr5 137581478 137581604 -62048546 + MIR3 SINE MIR 13 141 -67 * 23 33 0 0 chr5 137581667 137581697 -62048453 + AT_rich Low_complexity Low_complexity 1 30 0 239 154 0 0 chr5 137582062 137582101 -62048049 + MLT1L LTR MaLR 43 81 -534 586 245 75 24 chr5 137582301 137582513 -62047637 + MLT1L LTR MaLR 362 584 -31 1790 171 71 31 chr5 137583130 137583272 -62046878 + MLT1A1 LTR MaLR 1 136 -229 1768 192 7 0 chr5 137583272 137583602 -62046548 + AluJb SINE Alu 1 312 0 1790 171 71 31 chr5 137583602 137583810 -62046340 + MLT1A1 LTR MaLR 136 365 0 933 220 94 22 chr5 137585863 137586086 -62044064 + MER8 DNA MER2_type 1 239 0 26 30 0 0 chr5 137586086 137586119 -62044031 + AT_rich Low_complexity Low_complexity 1 33 0 2110 119 3 3 chr5 137586152 137586501 -62043649 + AluSx SINE Alu 1 349 0 235 296 45 34 chr5 137587170 137587258 -62042892 - L2 LINE L2 -187 3085 2997 183 80 0 0 chr5 137588012 137588037 -62042113 + (A)n Simple_repeat Simple_repeat 1 25 0 220 229 64 64 chr5 137589420 137589529 -62040621 + MIR SINE MIR 104 212 -50 452 318 15 51 chr5 137590532 137590727 -62039423 + MER5A DNA MER1_type 1 188 -1 312 317 0 0 chr5 137591913 137592017 -62038133 + (CATATA)n Simple_repeat Simple_repeat 5 108 0 25 0 0 0 chr5 137642184 137642209 -61987941 + GC_rich Low_complexity Low_complexity 1 25 0 252 100 0 0 chr5 137642502 137642542 -61987608 + (C)n Simple_repeat Simple_repeat 1 40 0 431 259 19 25 chr5 137643505 137643667 -61986483 + L1MC5 LINE L1 7764 7924 -37 1766 207 28 53 chr5 137644366 137644984 -61985166 + pTR5 LTR ERV1 743 1344 -1094 23 0 0 0 chr5 137645290 137645313 -61984837 + GC_rich Low_complexity Low_complexity 1 23 0 1209 175 15 8 chr5 137647609 137647877 -61982273 + AluSx SINE Alu 1 270 -42 191 36 36 0 chr5 137648372 137648400 -61981750 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 200 0 100 0 chr5 137648662 137648692 -61981458 + C-rich Low_complexity Low_complexity 4 36 0 1816 134 0 28 chr5 137649714 137650036 -61980114 + AluSx SINE Alu 1 314 0 624 328 67 0 chr5 137650039 137650271 -61979879 - L1 LINE L1 -1527 4619 4374 999 251 38 81 chr5 137650276 137650746 -61979404 - LTR7 LTR ERV1 0 450 1 1350 123 56 0 chr5 137650835 137651030 -61979120 + AluSx SINE Alu 1 206 -106 234 0 0 0 chr5 137651547 137651573 -61978577 + (T)n Simple_repeat Simple_repeat 1 26 0 181 54 0 54 chr5 137653931 137653968 -61976182 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 2015 47 0 55 chr5 137654569 137654843 -61975307 - AluSc SINE Alu -12 297 39 1910 101 34 27 chr5 137655062 137655358 -61974792 - AluSx SINE Alu -14 298 1 1980 94 29 4 chr5 137655474 137655749 -61974401 + AluSx SINE Alu 1 282 -30 2052 145 3 0 chr5 137656842 137657145 -61973005 + AluSx SINE Alu 1 304 -8 2029 111 11 0 chr5 137657145 137657426 -61972724 + AluSq SINE Alu 1 309 0 184 80 0 0 chr5 137657426 137657451 -61972699 + (TAAAA)n Simple_repeat Simple_repeat 2 100 0 588 250 16 0 chr5 137657458 137657586 -61972564 + FLAM_C SINE Alu 4 133 0 2010 121 3 26 chr5 137657887 137658193 -61971957 + AluSq SINE Alu 1 299 -14 227 77 0 0 chr5 137658337 137658376 -61971774 - Alu SINE Alu -2 298 260 226 68 68 0 chr5 137659159 137659203 -61970947 + CT-rich Low_complexity Low_complexity 1 47 0 192 158 0 0 chr5 137659610 137659648 -61970502 + C-rich Low_complexity Low_complexity 5 42 0 1930 116 7 3 chr5 137660300 137660585 -61969565 - AluSq SINE Alu -27 286 1 324 275 18 37 chr5 137660587 137660602 -61969548 - L1M4 LINE L1 -1083 5063 5049 1963 115 0 18 chr5 137660602 137661067 -61969083 - AluSx SINE Alu 0 460 1 324 275 18 37 chr5 137661067 137661159 -61968991 - L1M4 LINE L1 -1097 5049 4957 565 250 29 138 chr5 137661188 137661330 -61968820 - MIR SINE MIR -4 258 159 1718 159 3 3 chr5 137661330 137661620 -61968530 + AluSx SINE Alu 1 290 -22 565 250 29 138 chr5 137661620 137661753 -61968397 - MIR SINE MIR -103 159 13 207 0 0 0 chr5 137661862 137661885 -61968265 + (TGG)n Simple_repeat Simple_repeat 1 23 0 940 91 0 0 chr5 137661885 137662006 -61968144 - AluSc SINE Alu -23 286 166 905 80 0 0 chr5 137662006 137662118 -61968032 + AluSc SINE Alu 18 129 -180 180 169 34 17 chr5 137662284 137662343 -61967807 + (CATATA)n Simple_repeat Simple_repeat 2 61 0 271 0 51 0 chr5 137662634 137662673 -61967477 + (TTA)n Simple_repeat Simple_repeat 3 43 0 1957 135 0 3 chr5 137662676 137662964 -61967186 - AluSx SINE Alu -25 287 1 701 325 82 49 chr5 137663010 137663213 -61966937 - L3 LINE CR1 -2 1575 1380 2025 126 7 3 chr5 137663213 137663523 -61966627 + AluSx SINE Alu 2 312 0 701 325 82 49 chr5 137663523 137663744 -61966406 - L3 LINE CR1 -197 1380 1137 2285 90 0 3 chr5 137663796 137664107 -61966043 - AluSg SINE Alu 0 310 1 1107 157 5 5 chr5 137664122 137664319 -61965831 - AluSg/x SINE Alu 0 310 114 256 175 0 0 chr5 137664459 137664499 -61965651 - MER58 DNA MER1_type -128 213 174 208 83 62 21 chr5 137664646 137664694 -61965456 + T-rich Low_complexity Low_complexity 6 55 0 2188 68 54 0 chr5 137664752 137665046 -61965104 + AluY SINE Alu 1 310 -1 2200 147 66 20 chr5 137665561 137665970 -61964180 + MSTB1 LTR MaLR 4 431 -1 407 90 15 0 chr5 137666395 137666462 -61963688 - Alu SINE Alu -3 308 241 1963 125 4 0 chr5 137666585 137666865 -61963285 + AluSp SINE Alu 1 281 -32 219 69 0 0 chr5 137666866 137666895 -61963255 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1609 193 0 3 chr5 137666905 137667201 -61962949 + AluJo SINE Alu 1 295 -17 304 308 26 8 chr5 137667492 137667609 -61962541 + L1ME LINE L1 5574 5692 -429 198 170 21 53 chr5 137667676 137667770 -61962380 + CT-rich Low_complexity Low_complexity 5 95 0 2051 122 7 0 chr5 137667795 137668089 -61962061 - AluSx SINE Alu -16 296 1 627 310 84 53 chr5 137668799 137669157 -61960993 - MER115 DNA AcHobo -141 552 184 1832 117 0 25 chr5 137669214 137669496 -61960654 + AluSx SINE Alu 1 275 -37 378 42 0 0 chr5 137669496 137669544 -61960606 + (CA)n Simple_repeat Simple_repeat 1 48 0 1295 275 35 85 chr5 137670021 137670072 -61960078 + HAL1 LINE L1 1677 1729 -778 2288 103 0 0 chr5 137670072 137670374 -61959776 + AluSx SINE Alu 1 302 -10 1295 275 35 85 chr5 137670374 137670819 -61959331 + HAL1 LINE L1 1729 2194 -313 2008 147 0 0 chr5 137670819 137671118 -61959032 - AluSx SINE Alu -13 299 1 1295 275 35 85 chr5 137671118 137671201 -61958949 + HAL1 LINE L1 2194 2280 -227 273 29 0 0 chr5 137671201 137671235 -61958915 + (TG)n Simple_repeat Simple_repeat 2 35 0 1295 275 35 85 chr5 137671235 137671526 -61958624 + HAL1 LINE L1 2280 2506 -1 1255 106 6 0 chr5 137671896 137672076 -61958074 - AluSc SINE Alu -11 298 118 189 0 0 0 chr5 137672084 137672105 -61958045 + (TATG)n Simple_repeat Simple_repeat 2 22 0 2191 91 7 0 chr5 137672112 137672410 -61957740 - AluSp SINE Alu -13 300 1 727 138 9 9 chr5 137672413 137672529 -61957621 - AluY SINE Alu -181 130 15 2101 121 7 0 chr5 137672733 137673040 -61957110 - AluSx SINE Alu -3 309 1 1325 156 4 17 chr5 137675124 137675362 -61954788 - AluJb SINE Alu 0 312 78 274 146 125 0 chr5 137675365 137675444 -61954706 + Alu SINE Alu 230 314 0 2314 76 0 0 chr5 137675444 137675747 -61954403 + AluY SINE Alu 1 303 -8 670 114 259 36 chr5 137675749 137675915 -61954235 + L1MA9 LINE L1 6101 6303 -9 1511 98 9 9 chr5 137676281 137676506 -61953644 + AluSg/x SINE Alu 84 308 -2 1315 196 177 40 chr5 137676800 137677124 -61953026 + Charlie1b DNA MER1_type 1 279 -2482 1553 177 19 35 chr5 137677124 137677297 -61952853 - AluJo SINE Alu -4 308 141 2363 84 0 3 chr5 137677297 137677607 -61952543 - AluSx SINE Alu -3 309 1 1553 177 19 35 chr5 137677607 137677744 -61952406 - AluJo SINE Alu -171 141 3 1315 196 177 40 chr5 137677744 137677825 -61952325 + Charlie1b DNA MER1_type 279 348 -2413 2188 110 0 0 chr5 137677825 137678115 -61952035 - AluSx SINE Alu -22 290 1 1315 196 177 40 chr5 137678115 137678173 -61951977 + Charlie1b DNA MER1_type 348 523 0 684 257 90 40 chr5 137678738 137679038 -61951112 - L1MC5 LINE L1 -44 7917 7603 1705 167 10 10 chr5 137679074 137679386 -61950764 - AluJb SINE Alu 0 312 1 2085 111 10 0 chr5 137679506 137679804 -61950346 + AluSg SINE Alu 1 301 -9 2021 123 0 0 chr5 137679916 137680222 -61949928 + AluSx SINE Alu 1 306 0 528 93 0 0 chr5 137680332 137680407 -61949743 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 2347 70 3 6 chr5 137681016 137681328 -61948822 + AluY SINE Alu 1 311 0 2072 113 20 0 chr5 137682283 137682584 -61947566 - AluSq SINE Alu -6 307 1 432 0 0 0 chr5 137682584 137682632 -61947518 + (ATG)n Simple_repeat Simple_repeat 2 49 0 833 138 7 0 chr5 137682632 137682793 -61947357 - AluSg/x SINE Alu 0 318 157 1224 127 0 79 chr5 137682822 137683050 -61947100 - AluJo SINE Alu -82 230 21 2081 96 10 13 chr5 137683094 137683396 -61946754 + AluSx SINE Alu 1 301 -11 2274 76 0 7 chr5 137683681 137683985 -61946165 + AluSc SINE Alu 1 302 -7 2370 81 3 0 chr5 137683990 137684298 -61945852 + AluSp SINE Alu 2 310 -3 2394 74 7 0 chr5 137684302 137684612 -61945538 + AluSp SINE Alu 1 312 -1 192 254 82 73 chr5 137684622 137684732 -61945418 + MIR SINE MIR 137 247 -15 2099 121 0 3 chr5 137684807 137685113 -61945037 + AluSq SINE Alu 1 305 -8 27 0 0 0 chr5 137686159 137686186 -61943964 + AT_rich Low_complexity Low_complexity 1 27 0 2023 122 3 0 chr5 137686195 137686491 -61943659 + AluSq SINE Alu 1 297 -16 2173 103 3 3 chr5 137686691 137686993 -61943157 + AluSq SINE Alu 1 302 -11 351 301 171 20 chr5 137687025 137687171 -61942979 - L2 LINE L2 -3 3269 3102 1526 110 29 7 chr5 137687609 137687881 -61942269 + AluY SINE Alu 1 278 -33 2251 78 7 0 chr5 137688251 137688545 -61941605 - AluSp SINE Alu -17 296 1 550 260 77 0 chr5 137688552 137688596 -61941554 - L1ME LINE L1 -510 5660 5621 342 0 0 0 chr5 137688596 137688634 -61941516 + (TA)n Simple_repeat Simple_repeat 2 39 0 550 260 77 0 chr5 137688634 137688758 -61941392 - L1ME LINE L1 -549 5621 5479 3403 179 28 32 chr5 137688831 137688878 -61941272 - L1MB7 LINE L1 -9 6175 6129 189 0 0 0 chr5 137688878 137688899 -61941251 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1419 139 66 36 chr5 137688899 137689173 -61940977 - AluJb SINE Alu -30 282 1 3403 179 28 32 chr5 137689173 137689844 -61940306 - L1MB7 LINE L1 -53 6131 5459 472 141 80 178 chr5 137689846 137689889 -61940261 - MLT1A2 LTR MaLR 0 390 344 1969 122 3 25 chr5 137689889 137690208 -61939942 + AluSx SINE Alu 1 312 0 472 141 80 178 chr5 137690208 137690327 -61939823 - MLT1A2 LTR MaLR -46 344 237 675 200 15 8 chr5 137690328 137690458 -61939692 - MLT1A2 LTR MaLR -243 131 1 871 163 30 38 chr5 137690458 137690684 -61939466 - L1MB7 LINE L1 -717 5461 5235 216 0 0 0 chr5 137690684 137690708 -61939442 + (TA)n Simple_repeat Simple_repeat 2 25 0 2135 85 3 0 chr5 137690708 137690991 -61939159 - AluY SINE Alu -12 299 16 871 163 30 38 chr5 137690991 137691006 -61939144 - L1MB7 LINE L1 -941 5237 5219 1549 169 60 7 chr5 137691183 137691467 -61938683 + AluJo SINE Alu 1 299 -13 2116 108 0 3 chr5 137691979 137692276 -61937874 + AluSx SINE Alu 1 296 -16 443 246 71 28 chr5 137692282 137692493 -61937657 + L1M4 LINE L1 2606 2825 -3321 469 179 24 0 chr5 137692558 137692642 -61937508 + AluJo SINE Alu 49 134 -178 204 226 38 0 chr5 137692650 137692703 -61937447 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 423 283 54 12 chr5 137692716 137692956 -61937194 + L1M4 LINE L1 2926 3175 -2971 2028 128 0 0 chr5 137692956 137693253 -61936897 + AluSx SINE Alu 1 297 -15 1861 148 17 0 chr5 137693333 137693631 -61936519 + AluSx SINE Alu 1 303 -9 1983 121 0 0 chr5 137693924 137694205 -61935945 - AluSx SINE Alu -31 281 1 275 273 91 0 chr5 137694401 137694467 -61935683 + MLT1I LTR MaLR 98 169 -240 213 94 0 0 chr5 137694474 137694506 -61935644 + (TTTTTG)n Simple_repeat Simple_repeat 5 36 0 1589 99 6 131 chr5 137694539 137694853 -61935297 + AluSx SINE Alu 7 281 -31 276 53 0 0 chr5 137694872 137694910 -61935240 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1769 162 3 0 chr5 137694923 137695213 -61934937 + AluJo SINE Alu 1 291 -21 531 208 37 112 chr5 137695251 137695468 -61934682 + MLT1I LTR MaLR 199 549 0 2281 90 3 0 chr5 137695708 137696009 -61934141 + AluSp SINE Alu 1 302 -11 1915 137 3 0 chr5 137696020 137696313 -61933837 + AluSx SINE Alu 1 294 -18 467 108 14 0 chr5 137696355 137696429 -61933721 - HY3 scRNA scRNA -2 99 25 1003 315 86 40 chr5 137696501 137697506 -61932644 - L1M4 LINE L1 -1845 4301 3251 566 271 23 42 chr5 137697528 137697742 -61932408 - AluSg/x SINE Alu 0 312 103 774 130 26 0 chr5 137697842 137697957 -61932193 + AluSq/x SINE Alu 17 134 -178 1978 113 0 0 chr5 137698018 137698293 -61931857 + AluSx SINE Alu 1 275 -37 259 279 27 63 chr5 137698349 137698460 -61931690 - L3 LINE CR1 -14 1563 1457 204 324 29 0 chr5 137698492 137698560 -61931590 - L3 LINE CR1 -222 1355 1286 1836 131 0 24 chr5 137698619 137698934 -61931216 - AluSx SINE Alu 0 308 1 22 35 0 0 chr5 137698935 137698964 -61931186 + AT_rich Low_complexity Low_complexity 1 29 0 372 298 96 60 chr5 137699042 137699324 -61930826 - LTR67 LTR ERVL -264 293 2 401 286 51 13 chr5 137699369 137699603 -61930547 - L1M4 LINE L1 -2218 3928 3686 1750 163 0 7 chr5 137699693 137699988 -61930162 + AluJb SINE Alu 1 293 -19 2130 88 3 7 chr5 137699989 137700295 -61929855 + AluY SINE Alu 1 305 -6 556 253 58 19 chr5 137700315 137700469 -61929681 - MIR SINE MIR -27 235 76 625 205 252 0 chr5 137700582 137700733 -61929417 + MER5A DNA MER1_type 1 189 0 2009 125 3 3 chr5 137700775 137701078 -61929072 + AluSx SINE Alu 1 303 -9 1976 146 0 10 chr5 137701114 137701423 -61928727 + AluSx SINE Alu 1 306 -6 549 278 120 48 chr5 137701504 137701946 -61928204 + MLT1K LTR MaLR 1 474 -2 2044 118 0 3 chr5 137702050 137702338 -61927812 - AluSq SINE Alu -26 287 1 223 217 0 0 chr5 137702674 137702720 -61927430 + L2 LINE L2 3267 3312 -1 2138 119 3 0 chr5 137702735 137703095 -61927055 + AluSx SINE Alu 1 361 0 347 313 118 52 chr5 137704027 137704238 -61925912 - HAL1 LINE L1 -7 2500 2276 354 260 41 48 chr5 137704299 137704445 -61925705 - MER104 DNA Tc2 -4 176 32 2117 72 10 3 chr5 137704448 137704582 -61925568 + AluSx SINE Alu 1 133 -179 2211 88 0 3 chr5 137704582 137704877 -61925273 + AluSc SINE Alu 1 294 -15 2117 72 10 3 chr5 137704877 137705032 -61925118 + AluSx SINE Alu 133 292 -20 282 232 0 14 chr5 137705196 137705265 -61924885 - HsTC2 DNA Tc2 -608 1290 1223 * 517 182 36 9 chr5 137705260 137705370 -61924780 - HsTC2 DNA Tc2 -1782 116 4 213 162 0 0 chr5 137705436 137705473 -61924677 - L2 LINE L2 -251 3062 3026 1692 121 16 4 chr5 137705842 137706099 -61924051 + AluSq SINE Alu 1 260 -53 631 191 191 29 chr5 137706101 137706305 -61923845 - HAL1 LINE L1 -758 1749 1513 1760 89 4 0 chr5 137706331 137706567 -61923583 - AluSx SINE Alu -75 237 1 567 259 133 52 chr5 137707064 137707373 -61922777 - MER46C DNA MER2_type 0 338 5 2073 105 3 7 chr5 137707373 137707679 -61922471 - AluSc SINE Alu -4 305 1 182 62 31 0 chr5 137707708 137707740 -61922410 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1883 97 7 4 chr5 137707747 137708016 -61922134 - AluSq SINE Alu -43 270 1 2147 112 0 0 chr5 137709520 137709815 -61920335 + AluSq SINE Alu 1 295 -18 2061 126 0 7 chr5 137710016 137710325 -61919825 + AluSx SINE Alu 1 307 -5 197 308 66 44 chr5 137710523 137710614 -61919536 + L3 LINE CR1 880 972 -605 2246 105 0 3 chr5 137710729 137711043 -61919107 - AluSp SINE Alu 0 313 1 761 153 7 56 chr5 137711305 137711449 -61918701 - FLAM_C SINE Alu -5 138 2 237 33 0 0 chr5 137711527 137711557 -61918593 + (TG)n Simple_repeat Simple_repeat 1 30 0 2371 57 0 3 chr5 137711667 137711965 -61918185 - AluY SINE Alu -14 297 1 457 197 13 0 chr5 137712339 137712415 -61917735 + L1ME2 LINE L1 5512 5588 -576 1140 135 45 45 chr5 137712417 137712460 -61917690 + AluSg/x SINE Alu 85 127 -185 180 0 0 0 chr5 137712460 137712480 -61917670 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1140 135 45 45 chr5 137712480 137712547 -61917603 + AluSg/x SINE Alu 127 193 -119 2441 61 0 3 chr5 137712547 137712857 -61917293 - AluY SINE Alu -1 310 2 1140 135 45 45 chr5 137712857 137712967 -61917183 + AluSg/x SINE Alu 192 306 -6 202 206 32 0 chr5 137712970 137713033 -61917117 + GA-rich Low_complexity Low_complexity 2 66 0 625 191 125 0 chr5 137713035 137713171 -61916979 + L1ME2 LINE L1 5571 5723 -441 508 143 20 41 chr5 137713171 137713269 -61916881 + MER34 LTR ERV1 1 96 -446 1988 116 10 17 chr5 137713273 137713574 -61916576 + AluSx SINE Alu 2 300 -12 483 211 50 101 chr5 137713581 137713700 -61916450 + MER34 LTR ERV1 354 461 -81 1764 95 4 0 chr5 137713700 137713941 -61916209 + AluSg SINE Alu 1 242 -68 483 211 50 101 chr5 137713941 137714020 -61916130 + MER34 LTR ERV1 461 542 0 1148 203 68 17 chr5 137714021 137714316 -61915834 + L1ME2 LINE L1 5721 6030 -134 864 140 0 22 chr5 137714316 137714452 -61915698 + AluJo/FLAM SINE Alu 1 133 -169 1987 105 40 0 chr5 137714452 137714748 -61915402 + AluSq SINE Alu 1 308 -5 1991 113 10 3 chr5 137714750 137715050 -61915100 + AluSp SINE Alu 3 304 -9 1672 102 131 7 chr5 137715050 137715324 -61914826 + AluSg1 SINE Alu 1 308 -1 843 148 0 30 chr5 137715347 137715472 -61914678 + AluSq/x SINE Alu 6 128 -184 2134 121 0 13 chr5 137715472 137715786 -61914364 + AluSx SINE Alu 1 310 -2 566 265 14 14 chr5 137715822 137715969 -61914181 + L1ME2 LINE L1 6018 6164 0 1774 93 11 32 chr5 137715977 137716255 -61913895 + AluSg SINE Alu 39 310 0 2440 62 0 0 chr5 137716533 137716841 -61913309 + AluY SINE Alu 1 308 -3 764 157 0 0 chr5 137716945 137717060 -61913090 + AluSq/x SINE Alu 2 116 -197 1504 128 4 0 chr5 137717060 137717287 -61912863 - AluSg/x SINE Alu -7 305 78 2681 126 0 8 chr5 137717407 137717795 -61912355 + pTR5 LTR ERV1 8 392 -2046 1888 130 13 7 chr5 137718721 137719021 -61911129 + AluSx SINE Alu 1 302 -10 258 263 138 0 chr5 137720883 137720963 -61909187 + L2 LINE L2 3171 3261 -11 1836 122 75 0 chr5 137720965 137721243 -61908907 + AluSx SINE Alu 1 299 -13 31 0 0 0 chr5 137721248 137721279 -61908871 + AT_rich Low_complexity Low_complexity 1 31 0 301 333 116 0 chr5 137721528 137721666 -61908484 - MIR SINE MIR -42 220 67 272 264 82 45 chr5 137722571 137722681 -61907469 + L2 LINE L2 3158 3271 -1 198 208 21 21 chr5 137723178 137723226 -61906924 + MER5B DNA MER1_type 83 130 -48 180 0 0 0 chr5 137725569 137725589 -61904561 + (CGGGG)n Simple_repeat Simple_repeat 3 22 0 3491 62 0 7 chr5 137725783 137726234 -61903916 + LTR7 LTR ERV1 1 448 -2 2064 76 36 13 chr5 137726236 137726537 -61903613 + HERVH LTR ERV1 1 308 -7405 818 258 81 70 chr5 137726994 137727478 -61902672 + MER34 LTR ERV1 1 489 -53 * 1543 190 31 52 chr5 137727423 137727478 -61902672 + MSTC LTR MaLR 1 56 -368 2125 105 3 10 chr5 137727478 137727784 -61902366 + AluSx SINE Alu 1 304 -8 1543 190 31 52 chr5 137727784 137728046 -61902104 + MSTC LTR MaLR 56 360 -64 2144 99 10 0 chr5 137728046 137728348 -61901802 + AluSq SINE Alu 1 305 -8 1543 190 31 52 chr5 137728348 137728404 -61901746 + MSTC LTR MaLR 360 416 -8 266 173 37 49 chr5 137728411 137728492 -61901658 + MER34 LTR ERV1 435 514 -28 183 80 0 0 chr5 137728496 137728521 -61901629 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 261 0 0 0 chr5 137728541 137728570 -61901580 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr5 137728804 137728825 -61901325 + AT_rich Low_complexity Low_complexity 1 21 0 397 95 40 0 chr5 137728855 137728929 -61901221 + L1MB4 LINE L1 6104 6180 0 1417 189 33 13 chr5 137729381 137729683 -61900467 + AluJo SINE Alu 1 308 -4 390 206 27 0 chr5 137729772 137729845 -61900305 - MER2 DNA MER2_type 0 345 271 1018 183 6 0 chr5 137729851 137730031 -61900119 + AluJb SINE Alu 6 186 -126 1010 199 92 19 chr5 137730126 137730397 -61899753 + L1MC4 LINE L1 7283 7573 -469 779 186 0 0 chr5 137730399 137730523 -61899627 + FLAM_C SINE Alu 2 125 -18 860 167 144 70 chr5 137730525 137730743 -61899407 + L1MC4 LINE L1 7567 7810 -232 2365 59 0 3 chr5 137730743 137731046 -61899104 - AluY SINE Alu -9 302 1 860 167 144 70 chr5 137731046 137731097 -61899053 + L1MC4 LINE L1 7810 7856 -186 711 200 8 0 chr5 137731115 137731245 -61898905 + FLAM_C SINE Alu 2 132 -1 2401 79 0 0 chr5 137731253 137731556 -61898594 - AluY SINE Alu -7 304 2 219 36 0 0 chr5 137731558 137731586 -61898564 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1988 104 14 0 chr5 137731586 137731864 -61898286 - AluSx SINE Alu -30 282 1 2365 79 3 0 chr5 137731864 137732169 -61897981 - AluSp SINE Alu -7 306 1 611 172 9 9 chr5 137732175 137732291 -61897859 + Zaphod DNA AcHobo 3912 4027 -4 579 228 7 0 chr5 137732832 137732968 -61897182 + L1 LINE L1 5186 5322 -824 1864 105 42 21 chr5 137732978 137733264 -61896886 + AluSg SINE Alu 1 292 -18 1236 111 17 11 chr5 137733269 137733450 -61896700 + LTR9 LTR ERV1 431 612 0 268 61 0 0 chr5 137733465 137733498 -61896652 + HUERS-P3 LTR ERV1 15 47 -8872 1288 128 15 0 chr5 137733548 137733744 -61896406 + HUERS-P3 LTR ERV1 8720 8918 -1 415 118 0 44 chr5 137733744 137733812 -61896338 + LTR9 LTR ERV1 1 65 -547 2142 71 24 3 chr5 137733812 137734106 -61896044 - AluSq SINE Alu -10 303 4 364 78 0 0 chr5 137734108 137734159 -61895991 + LTR9 LTR ERV1 476 526 -86 777 122 2 114 chr5 137734163 137734328 -61895822 + L1ME LINE L1 5290 5398 -764 1974 121 0 16 chr5 137734328 137734633 -61895517 + AluSx SINE Alu 12 311 -1 777 122 2 114 chr5 137734633 137734713 -61895437 + L1ME LINE L1 5398 5485 -677 848 177 7 0 chr5 137734715 137734862 -61895288 + AluJ SINE Alu 4 151 -161 183 80 0 0 chr5 137734881 137734906 -61895244 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1096 126 29 0 chr5 137734910 137735085 -61895065 + L1P5 LINE L1 5485 5664 -492 677 181 9 0 chr5 137735095 137735211 -61894939 + FLAM_C SINE Alu 1 117 -16 700 28 79 32 chr5 137735228 137735447 -61894703 + (TA)n Simple_repeat Simple_repeat 1 229 0 398 190 51 0 chr5 137735447 137735526 -61894624 + AluJ SINE Alu 137 219 -83 2088 68 7 7 chr5 137735893 137736210 -61893940 - AluY SINE Alu 0 317 1 2294 69 3 3 chr5 137736719 137737010 -61893140 + AluY SINE Alu 1 291 -20 1807 117 0 0 chr5 137737138 137737402 -61892748 + AluSg1 SINE Alu 39 302 -7 2211 90 0 3 chr5 137737405 137737705 -61892445 + AluSx SINE Alu 1 299 -13 571 287 94 5 chr5 137737887 137738089 -61892061 + MIR SINE MIR 37 256 -6 2394 70 0 3 chr5 137738614 137738916 -61891234 + AluY SINE Alu 1 301 -10 234 0 0 0 chr5 137739873 137739899 -61890251 + (A)n Simple_repeat Simple_repeat 1 26 0 300 266 13 0 chr5 137740431 137740510 -61889640 + LTR67 LTR ERVL 5 84 -473 512 122 0 24 chr5 137740623 137740705 -61889445 - AluSg/x SINE Alu -20 292 213 * 757 179 100 0 chr5 137740702 137740842 -61889308 - AluJo SINE Alu -158 154 1 1935 158 0 0 chr5 137740934 137741238 -61888912 + AluSx SINE Alu 1 304 -8 426 245 42 28 chr5 137741343 137741486 -61888664 + LTR67 LTR ERVL 413 557 0 2469 59 0 0 chr5 137741523 137741830 -61888320 + AluY SINE Alu 1 307 -4 572 137 63 0 chr5 137742428 137742523 -61887627 + U6 snRNA snRNA 1 101 -6 2272 88 0 0 chr5 137742541 137742836 -61887314 + AluSc SINE Alu 1 295 -14 1001 126 32 63 chr5 137742895 137743085 -61887065 + AluJb SINE Alu 123 306 -6 681 162 52 0 chr5 137743118 137743254 -61886896 + L1MB4 LINE L1 6032 6174 -6 23 0 0 0 chr5 137743267 137743290 -61886860 + AT_rich Low_complexity Low_complexity 1 23 0 426 190 0 0 chr5 137743290 137743369 -61886781 + L1MB7 LINE L1 6096 6174 -10 1037 120 19 0 chr5 137743374 137743532 -61886618 - AluSg/x SINE Alu -18 294 134 1815 117 11 0 chr5 137743532 137743805 -61886345 - AluSp SINE Alu -1 312 37 2321 69 0 7 chr5 137743822 137744125 -61886025 - AluY SINE Alu -10 301 1 21 0 0 0 chr5 137744669 137744690 -61885460 + AT_rich Low_complexity Low_complexity 1 21 0 3331 29 5 0 chr5 137744849 137745234 -61884916 - L1PA3 LINE L1 -1 6154 5768 2087 107 7 3 chr5 137746175 137746484 -61883666 - AluSg SINE Alu 0 310 1 1727 112 131 4 chr5 137746488 137746756 -61883394 - AluSx SINE Alu 0 302 1 1043 209 112 153 chr5 137746929 137747361 -61882789 + MER50 LTR ERV1 10 457 -277 422 89 0 0 chr5 137747361 137747417 -61882733 + AluSc SINE Alu 233 288 -21 1043 209 112 153 chr5 137747417 137747685 -61882465 + MER50 LTR ERV1 457 734 0 269 315 99 0 chr5 137747714 137747825 -61882325 + L2 LINE L2 3145 3266 -6 2301 46 0 26 chr5 137747957 137748260 -61881890 + AluY SINE Alu 1 295 -16 526 207 103 0 chr5 137748401 137748517 -61881633 + FLAM_C SINE Alu 5 132 -11 1998 108 14 3 chr5 137748537 137748834 -61881316 + AluSg SINE Alu 1 300 -10 958 111 11 22 chr5 137748841 137749022 -61881128 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 309 109 0 0 chr5 137749022 137749068 -61881082 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 1905 84 11 14 chr5 137749246 137749521 -61880629 + AluSc SINE Alu 6 279 -30 252 274 214 26 chr5 137749957 137750074 -61880076 + L2 LINE L2 3133 3271 -1 2352 24 31 3 chr5 137750880 137751170 -61878980 + AluY SINE Alu 1 298 -13 210 402 58 0 chr5 137751272 137751359 -61878791 + L2 LINE L2 3123 3214 -58 240 35 0 0 chr5 137751399 137751428 -61878722 + (CA)n Simple_repeat Simple_repeat 1 29 0 2127 57 11 14 chr5 137751716 137752022 -61878128 - AluY SINE Alu 0 306 2 306 0 0 0 chr5 137752022 137752056 -61878094 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 672 99 22 0 chr5 137752056 137752147 -61878003 - AluJb SINE Alu -29 283 191 1132 212 0 40 chr5 137752147 137752397 -61877753 - AluJb SINE Alu -72 240 1 2107 125 3 3 chr5 137753102 137753414 -61876736 + AluSx SINE Alu 1 312 0 2186 95 14 0 chr5 137753962 137754257 -61875893 + AluSp SINE Alu 1 299 -14 1986 109 3 16 chr5 137754265 137754576 -61875574 + AluSg SINE Alu 1 307 -3 1800 157 0 32 chr5 137754753 137755066 -61875084 + AluJb SINE Alu 1 303 -9 1887 120 35 0 chr5 137755966 137756249 -61873901 + AluSx SINE Alu 1 293 -19 2158 94 0 3 chr5 137756284 137756598 -61873552 - AluSq SINE Alu 0 313 1 2428 52 10 0 chr5 137757316 137757621 -61872529 + AluSp SINE Alu 2 309 -4 756 240 158 40 chr5 137757658 137757754 -61872396 + HAL1 LINE L1 885 968 -1539 2010 130 20 0 chr5 137757754 137758046 -61872104 + AluSx SINE Alu 3 300 -12 756 240 158 40 chr5 137758046 137758106 -61872044 + HAL1 LINE L1 968 1020 -1487 1970 129 3 0 chr5 137758106 137758400 -61871750 + AluSx SINE Alu 1 295 -17 756 240 158 40 chr5 137758400 137758422 -61871728 + HAL1 LINE L1 1020 1038 -1469 1588 187 25 48 chr5 137758422 137758738 -61871412 + AluJb SINE Alu 1 309 -3 756 240 158 40 chr5 137758738 137759125 -61871025 + HAL1 LINE L1 1038 1378 -1129 337 48 0 0 chr5 137759125 137759167 -61870983 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1615 100 43 9 chr5 137759167 137759398 -61870752 - AluSq SINE Alu -30 283 45 756 240 158 40 chr5 137759398 137759466 -61870684 + HAL1 LINE L1 1377 1611 -896 1936 144 7 13 chr5 137759783 137760082 -61870068 + AluSx SINE Alu 1 297 -15 936 125 31 0 chr5 137760085 137760213 -61869937 + AluSp SINE Alu 1 132 -181 2022 131 0 0 chr5 137760216 137760507 -61869643 + AluY SINE Alu 1 291 -20 390 304 93 63 chr5 137760509 137760674 -61869476 - L2 LINE L2 -356 2958 2782 610 206 7 57 chr5 137760674 137760815 -61869335 - MER94 DNA DNA 0 134 1 390 304 93 63 chr5 137760815 137760886 -61869264 - L2 LINE L2 -532 2782 2715 1740 168 44 0 chr5 137761003 137761301 -61868849 + AluJb SINE Alu 2 312 0 1890 123 3 53 chr5 137761532 137761833 -61868317 - AluSx SINE Alu -26 286 1 184 363 108 10 chr5 137761989 137762091 -61868059 + L2 LINE L2 2371 2482 -832 2279 105 0 10 chr5 137762338 137762642 -61867508 + AluSq SINE Alu 1 301 -12 271 186 35 35 chr5 137762642 137762787 -61867363 + (CATATA)n Simple_repeat Simple_repeat 3 147 0 396 313 53 15 chr5 137763045 137763176 -61866974 + L2 LINE L2 3137 3272 0 260 322 158 30 chr5 137763640 137763768 -61866382 + MIR SINE MIR 35 145 -117 2306 68 7 29 chr5 137763768 137764076 -61866074 + AluY SINE Alu 1 301 -10 260 322 158 30 chr5 137764076 137764149 -61866001 + MIR SINE MIR 145 262 0 2084 116 0 0 chr5 137764180 137764457 -61865693 - AluSx SINE Alu -35 277 1 25 0 0 43 chr5 137764547 137764566 -61865584 + AT_rich Low_complexity Low_complexity 1 19 -26 1808 101 9 104 chr5 137764566 137764893 -61865257 + AluSx SINE Alu 1 296 -16 2079 114 0 26 chr5 137764903 137765209 -61864941 + AluSc SINE Alu 1 298 -11 25 0 0 43 chr5 137765209 137765225 -61864925 + AT_rich Low_complexity Low_complexity 28 45 0 2314 66 0 23 chr5 137765227 137765530 -61864620 + AluY SINE Alu 1 296 -15 2147 73 7 14 chr5 137765534 137765844 -61864306 + AluSg1 SINE Alu 1 309 0 2330 96 3 16 chr5 137765858 137766172 -61863978 + AluSp SINE Alu 1 310 -3 21 36 0 0 chr5 137766810 137766838 -61863312 + AT_rich Low_complexity Low_complexity 1 28 0 2124 117 7 7 chr5 137766960 137767267 -61862883 - AluSg SINE Alu -3 307 1 925 77 17 0 chr5 137767339 137767456 -61862694 + AluSc SINE Alu 1 119 -190 2110 145 0 0 chr5 137767875 137768179 -61861971 - AluSq SINE Alu -9 304 1 338 286 39 71 chr5 137768284 137768466 -61861684 + LTR16A LTR ERVL 133 308 -142 337 248 73 18 chr5 137768781 137768890 -61861260 + LTR16A LTR ERVL 336 450 0 490 274 57 30 chr5 137769016 137769350 -61860800 - L1MC4a LINE L1 -1849 5959 5593 2161 128 3 3 chr5 137769362 137769674 -61860476 - AluSx SINE Alu 0 312 1 1036 272 62 34 chr5 137769771 137770091 -61860059 + L2 LINE L2 2369 2697 -617 571 106 64 11 chr5 137770091 137770185 -61859965 - AluSg/x SINE Alu -11 301 203 2641 91 69 12 chr5 137770191 137770609 -61859541 - LTR7 LTR ERV1 -8 442 1 367 85 0 0 chr5 137770612 137770659 -61859491 - AluSp/q SINE Alu -98 205 159 233 288 18 90 chr5 137771667 137771778 -61858372 + MER91A DNA MER1_type 94 196 0 2392 98 0 3 chr5 137772993 137773300 -61856850 - AluSg SINE Alu -4 306 1 2069 135 0 0 chr5 137773510 137773799 -61856351 - AluSx SINE Alu -23 289 1 393 333 56 0 chr5 137773805 137773931 -61856219 + MIR SINE MIR 49 181 -81 1420 121 0 177 chr5 137774744 137775100 -61855050 - AluYa5 SINE Alu -18 293 1 1607 140 0 65 chr5 137775128 137775450 -61854700 + AluJb SINE Alu 1 301 -11 268 209 165 26 chr5 137775474 137775589 -61854561 - MLT1H LTR MaLR -8 541 420 258 246 0 0 chr5 137775709 137775766 -61854384 - MLT1G LTR MaLR -446 144 88 432 192 117 8 chr5 137775840 137775960 -61854190 - MIR SINE MIR -118 144 12 231 239 98 11 chr5 137776128 137776220 -61853930 - L1ME LINE L1 -281 5889 5790 356 275 93 86 chr5 137776264 137776555 -61853595 - L1ME LINE L1 -460 5714 5422 904 285 62 70 chr5 137776664 137777095 -61853055 - L1ME LINE L1 -944 5202 4769 2237 114 0 7 chr5 137777095 137777401 -61852749 - AluSx SINE Alu -8 304 1 904 285 62 70 chr5 137777401 137777795 -61852355 - L1ME LINE L1 -1377 4769 4382 2075 107 17 0 chr5 137777795 137778086 -61852064 + AluSg SINE Alu 1 296 -14 904 285 62 70 chr5 137778086 137778133 -61852017 - L1ME LINE L1 -1764 4382 4336 238 226 90 6 chr5 137778504 137778603 -61851547 - L1ME LINE L1 -2241 3905 3794 643 256 61 6 chr5 137778608 137778788 -61851362 - L1MC4 LINE L1 -1394 6648 6459 582 271 145 50 chr5 137778967 137779863 -61850287 - L1ME LINE L1 -2830 3316 2336 1685 128 23 11 chr5 137779885 137780151 -61849999 + L1PB1 LINE L1 5882 6150 -1 2334 69 7 0 chr5 137780183 137780473 -61849677 - AluY SINE Alu -19 292 1 275 304 25 16 chr5 137780541 137780679 -61849471 + L1M2 LINE L1 5316 5454 -697 1920 109 19 8 chr5 137780873 137781138 -61849012 + AluSg SINE Alu 6 273 -37 324 0 0 0 chr5 137781145 137781181 -61848969 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 937 121 0 0 chr5 137781202 137781326 -61848824 + FLAM_C SINE Alu 1 124 -19 1838 198 5 67 chr5 137781786 137781967 -61848183 + MLT1A1 LTR MaLR 1 147 -218 2286 115 0 0 chr5 137781967 137782279 -61847871 - AluSx SINE Alu 0 312 1 1838 198 5 67 chr5 137782279 137782486 -61847664 + MLT1A1 LTR MaLR 147 365 0 2278 129 0 0 chr5 137782897 137783206 -61846944 + AluSq SINE Alu 1 309 -4 645 201 79 0 chr5 137783490 137783629 -61846521 + MER5A DNA MER1_type 14 163 -26 2099 120 0 7 chr5 137783738 137784048 -61846102 - AluSx SINE Alu 0 308 1 21 0 0 0 chr5 137784048 137784069 -61846081 + AT_rich Low_complexity Low_complexity 1 21 0 488 224 158 12 chr5 137784098 137784263 -61845887 - MER5A DNA MER1_type 0 189 1 2092 129 0 3 chr5 137784687 137784995 -61845155 - AluSx SINE Alu 0 307 1 556 322 34 24 chr5 137785233 137785438 -61844712 - MER20B DNA MER1_type -576 207 1 439 195 55 61 chr5 137786416 137786580 -61843570 + L1ME4a LINE L1 5959 6121 0 1926 156 3 13 chr5 137786591 137786906 -61843244 + AluSx SINE Alu 1 312 0 1098 144 48 5 chr5 137786921 137787109 -61843041 + AluJo SINE Alu 91 286 -26 22 56 0 0 chr5 137787110 137787146 -61843004 + AT_rich Low_complexity Low_complexity 1 36 0 1565 97 9 9 chr5 137787152 137787369 -61842781 + AluSg/x SINE Alu 86 302 -10 1167 157 5 5 chr5 137787700 137787891 -61842259 - AluSp SINE Alu -120 193 3 288 0 0 0 chr5 137787893 137787925 -61842225 + (TA)n Simple_repeat Simple_repeat 1 32 0 1647 131 127 4 chr5 137787926 137788194 -61841956 - AluJb SINE Alu -11 301 1 32 43 0 0 chr5 137789209 137789255 -61840895 + AT_rich Low_complexity Low_complexity 1 46 0 2078 116 11 0 chr5 137789399 137789683 -61840467 - AluSx SINE Alu -24 288 2 1732 164 14 3 chr5 137789846 137790139 -61840011 + AluSx SINE Alu 1 296 -16 2350 92 0 7 chr5 137790183 137790489 -61839661 - AluSp SINE Alu -9 304 1 2106 113 0 13 chr5 137790491 137790792 -61839358 - AluSx SINE Alu -15 297 1 1613 186 3 17 chr5 137791017 137791318 -61838832 - AluJo SINE Alu -14 298 2 184 183 50 67 chr5 137791618 137791678 -61838472 - L3b LINE CR1 -242 1341 1283 21 36 0 0 chr5 137791967 137791995 -61838155 + AT_rich Low_complexity Low_complexity 1 28 0 2407 92 0 0 chr5 137792888 137793194 -61836956 - AluSc SINE Alu -3 306 1 785 218 145 105 chr5 137793255 137793682 -61836468 - MLT1F LTR MaLR -1 541 98 2192 102 0 3 chr5 137793723 137794018 -61836132 - AluY SINE Alu -17 294 1 2167 128 0 10 chr5 137794802 137795115 -61835035 - AluSx SINE Alu -2 310 1 1629 179 3 17 chr5 137795134 137795431 -61834719 - AluSx SINE Alu -19 293 1 2145 122 3 0 chr5 137795824 137796118 -61834032 - AluSx SINE Alu -17 295 1 1992 145 0 0 chr5 137796348 137796656 -61833494 + AluSx SINE Alu 1 308 0 2615 58 3 0 chr5 137799662 137799972 -61830178 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 137800182 137800203 -61829947 + AT_rich Low_complexity Low_complexity 1 21 0 2036 184 8 32 chr5 137800447 137800821 -61829329 - MLT1A1 LTR MaLR 0 365 1 2263 119 3 0 chr5 137800826 137801138 -61829012 - AluSp SINE Alu 0 313 1 2012 134 3 7 chr5 137801484 137801775 -61828375 - AluSq SINE Alu -15 298 9 273 158 0 0 chr5 137801778 137801816 -61828334 - Alu SINE Alu -263 39 2 380 311 29 68 chr5 137802528 137802734 -61827416 - MIR3 SINE MIR -2 206 9 21 36 0 0 chr5 137803256 137803284 -61826866 + AT_rich Low_complexity Low_complexity 1 28 0 1514 210 146 85 chr5 137803347 137804006 -61826144 - L1MD3 LINE L1 -1 7876 7201 276 186 0 137 chr5 137804006 137804108 -61826042 - MLT1F LTR MaLR -437 130 43 230 0 0 32 chr5 137804157 137804188 -61825962 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 2813 215 64 15 chr5 137804189 137804872 -61825278 - L1MC3 LINE L1 -771 7014 6298 2322 91 0 10 chr5 137805327 137805625 -61824525 - AluSx SINE Alu -13 299 5 375 23 0 0 chr5 137806547 137806591 -61823559 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 1970 117 11 11 chr5 137806594 137806877 -61823273 - AluSx SINE Alu -29 283 1 2264 118 10 0 chr5 137806952 137807258 -61822892 + AluSq SINE Alu 1 309 -4 2111 136 0 7 chr5 137807608 137807917 -61822233 - AluSx SINE Alu -5 307 1 26 30 0 0 chr5 137808356 137808389 -61821761 + AT_rich Low_complexity Low_complexity 1 33 0 1878 109 72 0 chr5 137809102 137809378 -61820772 - AluSx SINE Alu -16 296 1 188 386 114 0 chr5 137810303 137810373 -61819777 + MER5B DNA MER1_type 1 78 -100 21 36 0 0 chr5 137810710 137810738 -61819412 + AT_rich Low_complexity Low_complexity 1 28 0 1264 142 82 30 chr5 137811313 137811617 -61818533 - MER33 DNA MER1_type -11 313 1 816 160 0 0 chr5 137811951 137812076 -61818074 - AluSq/x SINE Alu -188 125 1 304 319 153 21 chr5 137812717 137812861 -61817289 - MIR SINE MIR -71 191 29 259 306 22 16 chr5 137812866 137812989 -61817161 - MIR SINE MIR -62 146 37 550 308 84 5 chr5 137813369 137813583 -61816567 + MIR SINE MIR 5 235 -27 331 305 76 46 chr5 137814280 137814411 -61815739 - L2 LINE L2 0 3272 3138 2030 102 49 3 chr5 137814466 137814750 -61815400 + AluSx SINE Alu 1 297 -15 347 288 181 0 chr5 137814779 137814939 -61815211 - L2 LINE L2 -1159 2155 1967 241 279 198 9 chr5 137815017 137815128 -61815022 + L2 LINE L2 3178 3309 -4 211 214 0 0 chr5 137815620 137815662 -61814488 + (ATTG)n Simple_repeat Simple_repeat 3 44 0 1940 95 71 21 chr5 137815665 137815948 -61814202 - AluSc SINE Alu -12 297 1 325 247 147 13 chr5 137816251 137816401 -61813749 - MLT1K LTR MaLR -23 565 396 271 313 0 0 chr5 137816785 137816865 -61813285 - MLT1K LTR MaLR -329 259 180 596 235 17 0 chr5 137817190 137817335 -61812815 + MER63 DNA MER1_type 679 1688 0 22 0 0 0 chr5 137817534 137817556 -61812594 + AT_rich Low_complexity Low_complexity 1 22 0 2028 137 0 7 chr5 137819072 137819364 -61810786 + AluSx SINE Alu 1 290 -22 2030 96 60 0 chr5 137819406 137819687 -61810463 - AluSx SINE Alu -13 299 2 28 29 0 0 chr5 137819897 137819932 -61810218 + AT_rich Low_complexity Low_complexity 1 35 0 358 287 0 0 chr5 137819996 137820097 -61810053 + Charlie7 DNA MER1_type 1 101 -2511 486 211 97 63 chr5 137821008 137821183 -61808967 - MLT1H1 LTR MaLR -12 543 363 1614 128 4 4 chr5 137821285 137821519 -61808631 - AluSc SINE Alu -3 306 73 510 246 35 0 chr5 137821555 137821669 -61808481 - MLT1H1 LTR MaLR -437 118 1 2371 53 21 0 chr5 137821688 137821972 -61808178 + AluY SINE Alu 1 290 -21 420 211 129 88 chr5 137822667 137822838 -61807312 - MER5B DNA MER1_type 0 178 1 1682 130 161 4 chr5 137822892 137823153 -61806997 + AluSx SINE Alu 1 302 0 21 36 0 0 chr5 137823840 137823868 -61806282 + AT_rich Low_complexity Low_complexity 1 28 0 180 152 0 0 chr5 137824281 137824314 -61805836 + (TAA)n Simple_repeat Simple_repeat 1 33 0 1037 149 109 15 chr5 137824444 137824645 -61805505 - AluJb SINE Alu -8 304 85 1143 103 0 0 chr5 137825704 137825885 -61804265 - AluSp SINE Alu 0 321 141 388 249 131 29 chr5 137826102 137826415 -61803735 - L1MEd LINE L1 -5114 1005 661 3387 66 25 9 chr5 137826424 137826865 -61803285 - LTR7 LTR ERV1 -2 448 1 2626 71 42 13 chr5 137826865 137827246 -61802904 - HERVH LTR ERV1 0 7713 7322 1457 106 23 9 chr5 137827244 137827461 -61802689 - HERVH LTR ERV1 -1894 5819 5600 * 4265 141 9 5 chr5 137827462 137828121 -61802029 - HERVH LTR ERV1 -2564 5149 4488 6217 91 3 5 chr5 137828123 137828984 -61801166 - HERVH LTR ERV1 -3720 3993 3134 * 16731 87 6 27 chr5 137828955 137831534 -61798616 - HERVH LTR ERV1 -4718 2995 609 1491 113 19 18 chr5 137831535 137831820 -61798330 - HERVH LTR ERV1 -6946 767 464 1970 142 0 0 chr5 137881823 137882105 -61748045 - AluSx SINE Alu -30 282 1 3559 146 127 3 chr5 137882105 137882729 -61747421 - MER4D LTR ERV1 -126 777 77 2294 116 0 0 chr5 137882731 137883032 -61747118 - AluSq SINE Alu -12 301 1 2265 86 10 0 chr5 137883186 137883477 -61746673 + AluSx SINE Alu 1 294 -18 1237 132 0 11 chr5 137883532 137883706 -61746444 + AluSx SINE Alu 1 172 -140 2660 42 0 6 chr5 137883898 137884210 -61745940 + AluY SINE Alu 1 310 -1 1576 99 0 9 chr5 137884221 137884444 -61745706 + AluSc SINE Alu 1 221 -88 2080 117 11 0 chr5 137884639 137884921 -61745229 + AluSp SINE Alu 1 285 -28 1691 190 20 7 chr5 137885065 137885360 -61744790 - AluJb SINE Alu -13 299 1 299 264 123 134 chr5 137885426 137885880 -61744270 - L2 LINE L2 -1 3271 2823 1098 108 0 0 chr5 137886103 137886242 -61743908 - AluSq/x SINE Alu -173 139 1 2219 120 0 0 chr5 137887248 137887548 -61742602 + AluSx SINE Alu 1 300 -12 266 78 274 0 chr5 137887573 137887624 -61742526 - Tigger4(Zombi) DNA MER2_type -2666 65 1 285 167 0 0 chr5 137887884 137887938 -61742212 + A-rich Low_complexity Low_complexity 1 54 0 611 225 7 35 chr5 137887943 137888085 -61742065 + MER21B LTR ERV1 330 467 -396 1896 242 53 60 chr5 137888090 137888946 -61741204 + L1M4c LINE L1 955 1842 -4540 1527 205 57 46 chr5 137888946 137889159 -61740991 - MLT1A2 LTR MaLR 0 374 154 2384 98 3 0 chr5 137889159 137889466 -61740684 - AluSx SINE Alu 0 312 5 1527 205 57 46 chr5 137889466 137889622 -61740528 - MLT1A2 LTR MaLR -220 154 1 1896 242 53 60 chr5 137889622 137889739 -61740411 + L1M4c LINE L1 1842 1958 -4424 1213 117 0 0 chr5 137889875 137890037 -61740113 + AluSg/x SINE Alu 130 291 -21 693 272 40 61 chr5 137890119 137890536 -61739614 + L1M4c LINE L1 1901 2306 -4257 2198 105 7 0 chr5 137890536 137890840 -61739310 + AluSq SINE Alu 1 306 -7 693 272 40 61 chr5 137890840 137890948 -61739202 + L1M4c LINE L1 2306 2415 -4148 28 29 0 0 chr5 137890959 137890994 -61739156 + AT_rich Low_complexity Low_complexity 1 35 0 2454 58 0 7 chr5 137890998 137891292 -61738858 + AluY SINE Alu 1 292 -19 1370 218 34 11 chr5 137891306 137891660 -61738490 + L1M4c LINE L1 3659 4020 -2362 4981 135 63 13 chr5 137891668 137892120 -61738030 + Tigger1 DNA MER2_type 24 452 -1966 2484 144 21 16 chr5 137892120 137892544 -61737606 - MSTB LTR MaLR 0 426 1 4981 135 63 13 chr5 137892544 137892915 -61737235 + Tigger1 DNA MER2_type 452 888 -1530 335 212 12 47 chr5 137892915 137893000 -61737150 - L1M4 LINE L1 -2055 4902 4821 894 253 47 0 chr5 137893024 137893257 -61736893 - L1M4 LINE L1 -2118 4839 4596 1684 123 35 35 chr5 137893457 137893718 -61736432 - AluSx SINE Alu -49 263 3 2098 114 33 10 chr5 137894262 137894561 -61735589 - AluSq SINE Alu -7 306 1 2226 102 30 3 chr5 137894810 137895114 -61735036 - AluSx SINE Alu 0 312 1 529 306 62 54 chr5 137895131 137895484 -61734666 + L2 LINE L2 2915 3270 -2 365 209 37 30 chr5 137896134 137896268 -61733882 - L1M4 LINE L1 -5181 1678 1544 569 257 7 34 chr5 137896277 137896425 -61733725 - MER21B LTR ERV1 -396 467 324 1062 165 0 103 chr5 137896461 137896632 -61733518 - AluJb SINE Alu -12 300 160 2343 98 0 19 chr5 137896632 137896950 -61733200 - AluSx SINE Alu 0 312 1 1062 165 0 103 chr5 137896950 137897020 -61733130 - AluJb SINE Alu -152 160 84 3769 221 62 84 chr5 137897025 137897087 -61733063 - L1M4 LINE L1 -5331 1528 1466 812 114 23 30 chr5 137897087 137897219 -61732931 + FLAM_C SINE Alu 1 131 -2 3769 221 62 84 chr5 137897219 137897730 -61732420 - L1M4 LINE L1 -5393 1466 945 1663 129 9 0 chr5 137897730 137897963 -61732187 - AluSx SINE Alu -77 235 1 3769 221 62 84 chr5 137897963 137898306 -61731844 - L1M4 LINE L1 -5914 945 644 1712 98 120 36 chr5 137898306 137898581 -61731569 + AluSp SINE Alu 1 298 -15 3769 221 62 84 chr5 137898581 137898934 -61731216 - L1M4 LINE L1 -6215 644 285 1722 105 41 129 chr5 137899252 137899413 -61730737 + AluSx SINE Alu 1 118 -194 2236 102 3 3 chr5 137899413 137899716 -61730434 + AluSc SINE Alu 1 303 -6 1722 105 41 129 chr5 137899716 137899896 -61730254 + AluSx SINE Alu 118 312 0 1597 175 14 17 chr5 137900357 137900654 -61729496 + AluJo SINE Alu 1 296 -16 681 164 0 18 chr5 137900656 137900766 -61729384 + FLAM_C SINE Alu 2 109 -34 2100 120 13 0 chr5 137900809 137901110 -61729040 + AluSx SINE Alu 1 305 -7 2090 134 7 0 chr5 137902251 137902549 -61727601 - AluSx SINE Alu -12 300 1 1594 167 48 4 chr5 137902618 137902888 -61727262 + AluJb SINE Alu 1 282 -30 2184 81 32 3 chr5 137902889 137903174 -61726976 + AluSc SINE Alu 1 293 -16 39 0 0 0 chr5 137903201 137903240 -61726910 + AT_rich Low_complexity Low_complexity 1 39 0 329 286 38 60 chr5 137903244 137903429 -61726721 + L1MC4a LINE L1 7543 7723 -85 1748 150 47 27 chr5 137903605 137903905 -61726245 + AluJb SINE Alu 1 306 -6 773 153 0 0 chr5 137903943 137904061 -61726089 + FLAM_C SINE Alu 13 130 -13 2301 108 0 3 chr5 137904065 137904370 -61725780 + AluSx SINE Alu 1 304 -8 247 320 70 0 chr5 137904693 137904793 -61725357 + MIR SINE MIR 39 145 -117 2326 103 3 3 chr5 137904969 137905281 -61724869 - AluSp SINE Alu 0 313 2 203 133 44 0 chr5 137905392 137905437 -61724713 + A-rich Low_complexity Low_complexity 4 50 0 351 356 23 23 chr5 137906030 137906204 -61723946 - MIR SINE MIR -3 259 86 2361 98 3 16 chr5 137906234 137906551 -61723599 + AluSp SINE Alu 1 313 0 226 254 0 0 chr5 137906661 137906724 -61723426 + MIR3 SINE MIR 132 194 -14 1035 247 87 69 chr5 137906918 137906980 -61723170 + L1ME1 LINE L1 5603 5662 -504 2144 123 0 16 chr5 137906980 137907289 -61722861 + AluSx SINE Alu 1 304 -8 1035 247 87 69 chr5 137907289 137907455 -61722695 + L1ME1 LINE L1 5662 5824 -342 1965 124 43 10 chr5 137907455 137907754 -61722396 + AluSg SINE Alu 1 309 -1 1035 247 87 69 chr5 137907754 137908078 -61722072 + L1ME1 LINE L1 5824 6166 0 1376 178 40 43 chr5 137908245 137908548 -61721602 + AluSx SINE Alu 5 306 -6 831 181 20 7 chr5 137908621 137908770 -61721380 + FRAM SINE Alu 11 161 -15 635 181 0 0 chr5 137908780 137908885 -61721265 + FLAM_C SINE Alu 7 111 -32 2218 103 3 0 chr5 137909034 137909326 -61720824 - AluSp SINE Alu -20 293 1 2546 148 2 5 chr5 137909333 137909751 -61720399 - L1MB4 LINE L1 -217 5963 5547 1320 130 235 0 chr5 137910016 137910254 -61719896 + AluJb SINE Alu 2 295 -7 1603 160 65 0 chr5 137910936 137911198 -61718952 + AluJo SINE Alu 4 282 -30 252 284 248 7 chr5 137911360 137911501 -61718649 + MIR SINE MIR 32 206 -56 234 0 0 0 chr5 137911697 137911723 -61718427 + (TA)n Simple_repeat Simple_repeat 2 27 0 1757 159 18 0 chr5 137911728 137912004 -61718146 - AluJo SINE Alu -31 281 1 2044 104 10 0 chr5 137912451 137912740 -61717410 - AluSx SINE Alu -15 297 6 814 174 14 0 chr5 137912759 137912897 -61717253 - L1M3 LINE L1 -492 5688 5549 1677 162 20 14 chr5 137912936 137913232 -61716918 + AluJo SINE Alu 1 298 -14 1799 167 3 0 chr5 137913235 137913546 -61716604 + AluJo SINE Alu 1 312 0 231 36 0 0 chr5 137913861 137913889 -61716261 + (TA)n Simple_repeat Simple_repeat 1 28 0 1958 135 3 0 chr5 137913892 137914189 -61715961 - AluSx SINE Alu -14 298 1 243 0 0 0 chr5 137914608 137914635 -61715515 + (T)n Simple_repeat Simple_repeat 1 27 0 561 191 18 18 chr5 137914667 137914777 -61715373 - AluSq/x SINE Alu -201 111 2 234 0 0 0 chr5 137915108 137915134 -61715016 + (T)n Simple_repeat Simple_repeat 1 26 0 707 164 0 0 chr5 137915165 137915275 -61714875 - AluSq/x SINE Alu -202 111 2 1050 136 0 0 chr5 137915807 137915962 -61714188 + AluSg/x SINE Alu 137 291 -19 1697 168 0 21 chr5 137916011 137916147 -61714003 + AluJb SINE Alu 1 138 -180 1926 132 4 0 chr5 137916147 137916469 -61713681 + AluSx SINE Alu 1 323 0 1697 168 0 21 chr5 137916469 137916655 -61713495 + AluJb SINE Alu 138 318 0 2069 187 62 15 chr5 137916843 137917083 -61713067 + L1 LINE L1 4839 5066 -1080 1511 164 3 72 chr5 137917083 137917264 -61712886 - AluJb SINE Alu -16 296 145 2167 102 0 0 chr5 137917264 137917557 -61712593 - AluSc SINE Alu -16 293 1 1511 164 3 72 chr5 137917557 137917693 -61712457 - AluJb SINE Alu -167 145 1 2069 187 62 15 chr5 137917693 137917922 -61712228 + L1 LINE L1 5066 5330 -816 688 132 0 9 chr5 137917926 137918141 -61712009 + AluJb SINE Alu 3 286 -26 451 91 65 0 chr5 137918141 137918218 -61711932 + L1M LINE L1 5325 5406 -894 1755 145 14 3 chr5 137918617 137918914 -61711236 - AluSx SINE Alu -12 300 1 2299 98 0 9 chr5 137919523 137919839 -61710311 + AluSq SINE Alu 1 313 0 1829 131 0 45 chr5 137920477 137920631 -61709519 - AluSx SINE Alu -25 287 151 2458 62 0 0 chr5 137920631 137920936 -61709214 - AluSc SINE Alu -4 305 1 1829 131 0 45 chr5 137920936 137921072 -61709078 - AluSx SINE Alu -161 151 10 1088 91 0 0 chr5 137921172 137921315 -61708835 - AluSq/x SINE Alu -165 147 5 226 310 35 14 chr5 137921333 137921475 -61708675 + L1MC4a LINE L1 4729 4873 -1273 1893 136 3 11 chr5 137921522 137921808 -61708342 + AluSq SINE Alu 1 284 -29 237 305 9 9 chr5 137921871 137921976 -61708174 + L1MC4a LINE L1 4912 5016 -1130 2865 208 30 38 chr5 137922010 137922668 -61707482 + MER82 DNA MER2_type 1 653 0 578 228 38 19 chr5 137922696 137922854 -61707296 + L1MC4a LINE L1 5769 5929 -1879 2200 88 14 0 chr5 137922866 137923150 -61707000 + AluSg SINE Alu 1 288 -22 790 186 49 11 chr5 137923231 137923414 -61706736 - L1MB2 LINE L1 -2 6169 5980 1704 122 10 47 chr5 137923505 137923801 -61706349 + AluSx SINE Alu 1 285 -27 317 211 9 61 chr5 137923801 137923854 -61706296 - L1ME4a LINE L1 -24 6097 6052 1755 154 50 7 chr5 137923854 137924153 -61705997 + AluJb SINE Alu 1 312 0 317 211 9 61 chr5 137924153 137924213 -61705937 - L1ME4a LINE L1 -69 6052 5990 1185 147 18 23 chr5 137924225 137924443 -61705707 - AluJb SINE Alu -15 297 81 2100 114 0 0 chr5 137924551 137924850 -61705300 - AluSq SINE Alu -14 299 1 1408 207 143 15 chr5 137924972 137925199 -61704951 + L2 LINE L2 2441 2638 -676 2174 97 3 7 chr5 137925199 137925499 -61704651 - AluSp SINE Alu -14 299 1 1408 207 143 15 chr5 137925499 137925677 -61704473 + L2 LINE L2 2638 2898 -416 659 223 66 0 chr5 137925735 137925901 -61704249 + MER96B DNA MER1_type? 241 417 0 344 304 131 46 chr5 137925915 137926111 -61704039 + L2 LINE L2 2934 3112 -201 1741 141 3 21 chr5 137926111 137926394 -61703756 - AluJb SINE Alu -15 297 20 344 304 131 46 chr5 137926394 137926526 -61703624 + L2 LINE L2 3112 3290 -23 2244 90 6 0 chr5 137926563 137926874 -61703276 + AluSp SINE Alu 1 313 0 1775 167 3 3 chr5 137926910 137927215 -61702935 + AluSx SINE Alu 1 305 -7 391 207 55 79 chr5 137927713 137927877 -61702273 - MER106B DNA MER1_type -1 1058 899 1970 119 13 3 chr5 137927880 137928182 -61701968 + AluSx SINE Alu 1 305 -7 467 345 110 0 chr5 137928271 137928462 -61701688 - MIR SINE MIR -33 229 18 2380 82 0 0 chr5 137928516 137928821 -61701329 + AluSx SINE Alu 1 305 -7 1857 148 0 20 chr5 137929459 137929756 -61700394 + AluJb SINE Alu 1 291 -21 186 43 0 0 chr5 137931375 137931398 -61698752 + (A)n Simple_repeat Simple_repeat 1 23 0 1399 202 48 7 chr5 137931537 137931809 -61698341 + AluJo SINE Alu 1 283 -29 21 0 0 0 chr5 137931896 137931917 -61698233 + AT_rich Low_complexity Low_complexity 1 21 0 1041 96 0 7 chr5 137931917 137932063 -61698087 + AluSg/x SINE Alu 150 294 -16 391 299 80 30 chr5 137932152 137932353 -61697797 + L1ME LINE L1 5564 5774 -347 192 152 0 0 chr5 137932482 137932515 -61697635 + (CATA)n Simple_repeat Simple_repeat 2 34 0 466 284 104 25 chr5 137932786 137932987 -61697163 - LTR67 LTR ERVL -340 217 1 25 0 0 0 chr5 137933056 137933081 -61697069 + AT_rich Low_complexity Low_complexity 1 25 0 1433 127 127 15 chr5 137933260 137933528 -61696622 - AluJb SINE Alu -14 298 1 2006 93 14 0 chr5 137934246 137934552 -61695598 - AluSx SINE Alu 0 310 1 3566 193 50 31 chr5 137935098 137935537 -61694613 - L1ME1 LINE L1 -5 6230 5801 228 35 0 0 chr5 137935537 137935566 -61694584 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3566 193 50 31 chr5 137935566 137935678 -61694472 - L1ME1 LINE L1 -434 5801 5693 1847 145 30 7 chr5 137935678 137935981 -61694169 + AluSx SINE Alu 1 310 -2 3566 193 50 31 chr5 137935981 137936427 -61693723 - L1ME1 LINE L1 -542 5693 5217 1130 240 67 10 chr5 137936415 137936727 -61693423 - L1ME1 LINE L1 -6031 365 36 * 1101 221 185 43 chr5 137936880 137937297 -61692853 - LTR50 LTR ERVL -316 479 4 1779 119 0 36 chr5 137937384 137937662 -61692488 + AluSx SINE Alu 6 273 -39 614 279 21 71 chr5 137937834 137938160 -61691990 - ERVL LTR ERVL -257 5507 5198 244 120 40 0 chr5 137938170 137938220 -61691930 + CT-rich Low_complexity Low_complexity 3 54 0 2117 279 80 21 chr5 137938233 137938422 -61691728 - ERVL LTR ERVL -752 5012 4836 1941 207 88 107 chr5 137938422 137939263 -61690887 - LTR1B LTR ERV1 0 826 2 2117 279 80 21 chr5 137939263 137939846 -61690304 - ERVL LTR ERVL -928 4836 4194 1981 136 10 0 chr5 137939899 137940200 -61689950 + AluJb SINE Alu 1 304 -8 1886 129 14 0 chr5 137940200 137940486 -61689664 + AluSx SINE Alu 1 291 -21 1271 109 11 0 chr5 137941710 137941884 -61688266 - AluSq SINE Alu -137 176 1 831 201 13 0 chr5 137941900 137942073 -61688077 + FRAM SINE Alu 1 170 0 1633 144 43 0 chr5 137942085 137942363 -61687787 + AluJo SINE Alu 13 302 -10 1024 152 43 52 chr5 137943397 137943608 -61686542 - AluJb SINE Alu -19 293 85 2463 37 0 7 chr5 137943615 137943915 -61686235 - AluY SINE Alu -13 298 1 383 237 202 15 chr5 137944127 137944325 -61685825 - MIR SINE MIR 0 262 28 1375 122 0 5 chr5 137944391 137944604 -61685546 + AluSp SINE Alu 1 212 -101 490 90 15 0 chr5 137944604 137944671 -61685479 + AluSp SINE Alu 78 145 -168 2134 84 7 0 chr5 137944671 137944967 -61685183 + AluSx SINE Alu 1 298 -14 190 371 11 11 chr5 137945956 137946045 -61684105 + L2 LINE L2 2625 2713 -601 383 246 108 8 chr5 137946072 137946202 -61683948 - MER8 DNA MER2_type -96 143 1 4553 62 17 2 chr5 137946265 137946842 -61683308 - LTR10C LTR ERV1 0 591 6 191 138 60 147 chr5 137946882 137946998 -61683152 + L2 LINE L2 2881 2986 -327 4107 138 14 11 chr5 137947021 137947673 -61682477 + LTR8A LTR ERV1 2 656 -66 1912 118 0 30 chr5 137947673 137947977 -61682173 - AluSg SINE Alu -15 295 1 1853 153 0 7 chr5 137948259 137948553 -61681597 - AluSx SINE Alu -20 292 1 2183 75 0 0 chr5 137948789 137949096 -61681054 + AluSc SINE Alu 1 307 0 1451 142 23 11 chr5 137949492 137949752 -61680398 + AluJb SINE Alu 1 263 -49 2155 84 0 7 chr5 137949933 137950231 -61679919 + AluSg SINE Alu 1 296 -14 2150 93 3 0 chr5 137950241 137950532 -61679618 + AluSg SINE Alu 1 292 -18 2197 97 0 7 chr5 137950538 137950847 -61679303 + AluSq SINE Alu 1 307 -6 366 267 0 0 chr5 137950997 137951083 -61679067 + MER5A DNA MER1_type 21 106 -83 2359 59 7 10 chr5 137951894 137952199 -61677951 + AluSp SINE Alu 3 306 -7 217 297 85 34 chr5 137952409 137952527 -61677623 + L2 LINE L2 3148 3271 -1 324 0 0 0 chr5 137953293 137953329 -61676821 + (TG)n Simple_repeat Simple_repeat 2 37 0 313 185 0 111 chr5 137953598 137953679 -61676471 - MER5A DNA MER1_type -80 109 38 2039 99 14 14 chr5 137954418 137954710 -61675440 + AluSx SINE Alu 11 302 -10 374 267 84 15 chr5 137954961 137955092 -61675058 + MIR SINE MIR 118 257 -5 434 249 107 62 chr5 137955475 137955700 -61674450 - L1ME4a LINE L1 -1 6120 5886 1768 161 7 7 chr5 137955736 137956035 -61674115 - AluJb SINE Alu -13 299 1 1028 128 58 0 chr5 137956077 137956233 -61673917 - AluSg/x SINE Alu -19 293 129 850 150 5 61 chr5 137956361 137957001 -61673149 - SVA Other Other -744 642 442 1909 118 7 14 chr5 137957265 137957561 -61672589 - AluSx SINE Alu -18 294 1 24 0 0 0 chr5 137957581 137957605 -61672545 + AT_rich Low_complexity Low_complexity 1 24 0 2196 88 0 0 chr5 137957605 137957914 -61672236 - AluSq SINE Alu 0 311 3 335 260 203 13 chr5 137958508 137958735 -61671415 + L1ME4a LINE L1 5564 5833 -288 24 67 0 0 chr5 137958769 137958814 -61671336 + AT_rich Low_complexity Low_complexity 1 45 0 589 203 39 0 chr5 137958935 137959063 -61671087 - FLAM_A SINE Alu 0 142 10 350 273 23 82 chr5 137959096 137959124 -61671026 - L1MC4a LINE L1 -1883 5925 5897 2238 89 0 0 chr5 137959124 137959417 -61670733 - AluSg SINE Alu -17 293 1 350 273 23 82 chr5 137959417 137959470 -61670680 - L1MC4a LINE L1 -1911 5897 5842 1417 192 52 3 chr5 137959470 137959761 -61670389 - AluJb SINE Alu -7 305 1 350 273 23 82 chr5 137959761 137959934 -61670216 - L1MC4a LINE L1 -1966 5842 5685 2177 94 3 0 chr5 137959991 137960288 -61669862 + AluSp SINE Alu 1 298 -15 1898 125 14 0 chr5 137960591 137960886 -61669264 + AluSx SINE Alu 1 299 -13 349 242 0 0 chr5 137961434 137961496 -61668654 - AluSg/x SINE Alu -105 197 136 2055 125 0 3 chr5 137961509 137961814 -61668336 - AluSq SINE Alu -9 304 1 2487 59 0 7 chr5 137962173 137962478 -61667672 - AluY SINE Alu -8 303 1 2371 81 0 0 chr5 137963734 137964044 -61666106 - AluY SINE Alu 0 310 1 2192 89 11 3 chr5 137964054 137964336 -61665814 - AluSc SINE Alu -25 284 1 1397 163 27 93 chr5 137964406 137964738 -61665412 - AluJo SINE Alu -2 310 1 2480 63 3 3 chr5 137964740 137965040 -61665110 - AluSc SINE Alu -9 300 1 1041 116 0 0 chr5 137965041 137965179 -61664971 - AluSq/x SINE Alu -174 138 1 202 151 75 0 chr5 137965181 137965234 -61664916 + A-rich Low_complexity Low_complexity 2 58 0 189 0 0 0 chr5 137965320 137965341 -61664809 + (T)n Simple_repeat Simple_repeat 1 21 0 27 0 0 0 chr5 137966795 137966822 -61663328 + AT_rich Low_complexity Low_complexity 1 27 0 2092 123 9 22 chr5 137966946 137967262 -61662888 - AluSx SINE Alu 0 312 1 234 0 0 0 chr5 137967281 137967307 -61662843 + (A)n Simple_repeat Simple_repeat 1 26 0 1484 170 3 47 chr5 137968128 137968445 -61661705 - L1MB7 LINE L1 -19 6165 5863 919 164 0 26 chr5 137968774 137968926 -61661224 - MER1B DNA MER1_type -149 148 1 1304 153 60 0 chr5 137968970 137969186 -61660964 - AluJb SINE Alu -1 311 83 2344 60 0 0 chr5 137969861 137970142 -61660008 + AluY SINE Alu 27 307 -4 2335 82 0 0 chr5 137970146 137970439 -61659711 + AluSg SINE Alu 1 293 -17 3200 65 29 1 chr5 137970499 137971009 -61659141 - LTR10C LTR ERV1 0 591 1 4151 231 46 5 chr5 137971435 137972491 -61657659 + L1M4 LINE L1 4243 5342 -804 585 155 56 21 chr5 137972600 137972682 -61657468 + L1M LINE L1 5263 5354 -824 2443 90 0 7 chr5 137972682 137972992 -61657158 - AluSg SINE Alu -2 308 1 585 155 56 21 chr5 137972992 137973051 -61657099 + L1M LINE L1 5354 5409 -769 186 43 0 0 chr5 137973125 137973148 -61657002 + (TAG)n Simple_repeat Simple_repeat 2 24 0 1787 147 42 7 chr5 137973657 137973942 -61656208 + AluSx SINE Alu 1 295 -17 1351 199 62 7 chr5 137974018 137974309 -61655841 + AluJo SINE Alu 1 307 -5 2220 105 0 3 chr5 137974314 137974608 -61655542 + AluSx SINE Alu 1 293 -19 339 163 43 65 chr5 137974944 137975036 -61655114 - L1MB2 LINE L1 0 6171 6082 896 73 9 0 chr5 137975136 137975245 -61654905 - AluSq/x SINE Alu -202 110 1 307 221 13 13 chr5 137975291 137975368 -61654782 - MIR SINE MIR -12 250 174 762 118 134 0 chr5 137975368 137975495 -61654655 + FRAM SINE Alu 26 169 -7 2135 129 10 7 chr5 137975703 137976013 -61654137 + AluSq SINE Alu 2 312 -1 1750 157 0 31 chr5 137976609 137976902 -61653248 + AluJo SINE Alu 1 284 -28 2267 115 3 0 chr5 137977244 137977549 -61652601 - AluSx SINE Alu -6 306 1 22 0 0 0 chr5 137977592 137977614 -61652536 + AT_rich Low_complexity Low_complexity 1 22 0 2200 135 3 0 chr5 137977819 137978130 -61652020 - AluSx SINE Alu 0 312 1 2316 112 0 3 chr5 137978891 137979195 -61650955 + AluSx SINE Alu 1 303 -9 33 25 0 0 chr5 137979255 137979295 -61650855 + AT_rich Low_complexity Low_complexity 1 40 0 383 260 207 12 chr5 137979748 137979917 -61650233 + L2 LINE L2 2567 2768 -546 1498 156 0 0 chr5 137980018 137980236 -61649914 - AluSx SINE Alu -94 218 1 782 227 41 12 chr5 137980749 137980921 -61649229 + MER58A DNA MER1_type 43 219 -5 25 0 0 0 chr5 137981268 137981293 -61648857 + AT_rich Low_complexity Low_complexity 1 25 0 2091 135 7 3 chr5 137981307 137981611 -61648539 - AluSx SINE Alu -7 305 1 643 168 0 17 chr5 137981614 137981733 -61648417 - AluJb SINE Alu -21 291 175 2170 89 4 0 chr5 137981734 137982005 -61648145 - AluSg SINE Alu -38 272 1 637 131 61 0 chr5 137982035 137982134 -61648016 + U6 snRNA snRNA 2 106 -1 1716 175 33 7 chr5 137982396 137982699 -61647451 + AluJo SINE Alu 2 312 0 1838 135 0 15 chr5 137982740 137983007 -61647143 + AluSx SINE Alu 1 263 -49 2305 80 0 26 chr5 137983814 137984116 -61646034 + AluSx SINE Alu 1 294 -18 921 183 94 11 chr5 137984222 137984402 -61645748 + AluJo SINE Alu 1 195 -117 558 231 69 17 chr5 137984720 137984893 -61645257 + MIR SINE MIR 80 261 -1 1685 163 3 47 chr5 137986336 137986655 -61643495 - AluJb SINE Alu -3 309 5 1604 173 3 50 chr5 137986838 137987139 -61643011 - AluJb SINE Alu -25 287 1 1823 159 3 23 chr5 137987192 137987493 -61642657 + AluJb SINE Alu 3 297 -15 1314 180 124 19 chr5 137987499 137987766 -61642384 + AluJo SINE Alu 1 295 -17 2206 117 0 7 chr5 137987849 137988147 -61642003 - AluSg SINE Alu -14 296 1 297 96 0 77 chr5 137989210 137989262 -61640888 - AluSp SINE Alu -135 168 121 425 54 0 0 chr5 137989818 137989874 -61640276 - AluSp SINE Alu -180 133 78 1337 165 0 0 chr5 137989874 137990086 -61640064 - AluSx SINE Alu -100 212 1 1763 91 0 25 chr5 137990111 137990352 -61639798 - AluSx SINE Alu -16 296 62 1902 136 37 7 chr5 137991344 137991638 -61638512 + AluSq SINE Alu 1 303 -10 501 274 147 8 chr5 137991939 137992191 -61637959 + HAL1 LINE L1 1911 2197 -310 2380 93 3 0 chr5 137992962 137993263 -61636887 + AluSg1 SINE Alu 1 302 -7 475 110 0 27 chr5 137993267 137993340 -61636810 - MER4B LTR ERV1 -539 71 1 183 341 106 23 chr5 137993438 137993570 -61636580 - L3b LINE CR1 -1 1582 1440 238 330 85 0 chr5 137993827 137993949 -61636201 + MIR SINE MIR 11 143 -65 296 304 46 52 chr5 137994302 137994496 -61635654 - MIR SINE MIR -52 210 18 394 292 110 67 chr5 137994770 137995281 -61634869 - MER34 LTR ERV1 0 542 10 271 268 0 93 chr5 137995290 137995387 -61634763 + MER21B LTR ERV1 9 96 -767 1755 165 78 54 chr5 137995466 137995891 -61634259 - MER54B LTR ERVL 0 793 359 4215 117 24 6 chr5 137996020 137996644 -61633506 + MER41B LTR ERV1 1 635 0 3850 180 119 18 chr5 137996679 137997462 -61632688 - MER21B LTR ERV1 -1 862 1 2837 209 72 24 chr5 137997488 137998077 -61632073 + MER21B LTR ERV1 98 720 -143 330 26 0 0 chr5 137998077 137998116 -61632034 + (AATTG)n Simple_repeat Simple_repeat 3 41 0 2837 209 72 24 chr5 137998116 137998147 -61632003 + MER21B LTR ERV1 720 748 -115 2221 138 0 0 chr5 137998779 137999091 -61631059 - AluSx SINE Alu 0 312 1 21 36 0 0 chr5 137999122 137999150 -61631000 + AT_rich Low_complexity Low_complexity 1 28 0 300 158 31 181 chr5 137999164 137999282 -61630868 + L1M4 LINE L1 2725 2859 -3287 4252 138 19 18 chr5 137999282 137999733 -61630417 + L1MA8 LINE L1 5559 6013 -278 2236 126 126 11 chr5 137999733 138000114 -61630036 + MSTA LTR MaLR 4 428 0 4252 138 19 18 chr5 138000114 138000394 -61629756 + L1MA8 LINE L1 6013 6291 0 300 158 31 181 chr5 138000394 138000475 -61629675 + L1M4 LINE L1 2859 2881 -3265 1735 165 3 51 chr5 138000475 138000790 -61629360 + AluJb SINE Alu 1 300 -12 300 158 31 181 chr5 138000790 138000843 -61629307 + L1M4 LINE L1 2881 2940 -3206 604 265 0 0 chr5 138001100 138001232 -61628918 - MER94 DNA DNA -2 132 1 2158 115 0 0 chr5 138002009 138002295 -61627855 + AluSx SINE Alu 1 286 -26 2247 115 0 7 chr5 138002567 138002871 -61627279 + AluSx SINE Alu 1 302 -10 2407 150 39 7 chr5 138003094 138003507 -61626643 + MSTB LTR MaLR 1 426 0 186 194 60 90 chr5 138003658 138003725 -61626425 - MER5A DNA MER1_type -69 120 56 1381 166 4 72 chr5 138004883 138005161 -61624989 + AluJo SINE Alu 1 259 -53 183 47 23 47 chr5 138005164 138005207 -61624943 + (TAAAA)n Simple_repeat Simple_repeat 2 43 0 2235 114 3 0 chr5 138005212 138005509 -61624641 + AluSq SINE Alu 3 300 -13 1373 212 24 3 chr5 138005974 138006262 -61623888 - AluJo SINE Alu -18 294 1 189 0 0 0 chr5 138006477 138006498 -61623652 + (T)n Simple_repeat Simple_repeat 1 21 0 498 212 35 0 chr5 138007044 138007157 -61622993 + L1MB4 LINE L1 6064 6180 0 231 151 75 0 chr5 138007162 138007215 -61622935 + HAL1 LINE L1 2007 2063 -444 250 304 25 0 chr5 138007264 138007343 -61622807 + MIR SINE MIR 64 144 -118 241 204 0 0 chr5 138007344 138007393 -61622757 - LTR67 LTR ERVL 0 557 509 618 271 99 10 chr5 138007431 138007623 -61622527 + LTR33 LTR ERVL 19 227 -294 189 0 0 0 chr5 138007633 138007654 -61622496 + (T)n Simple_repeat Simple_repeat 1 21 0 333 214 86 34 chr5 138008422 138008539 -61621611 + MIR SINE MIR 140 262 0 22 56 0 0 chr5 138008569 138008605 -61621545 + AT_rich Low_complexity Low_complexity 1 36 0 1579 108 164 4 chr5 138008822 138009072 -61621078 - AluSg1 SINE Alu -19 290 1 694 183 0 53 chr5 138009502 138009655 -61620495 + FLAM_C SINE Alu 1 133 0 948 238 15 0 chr5 138009755 138009961 -61620189 - MIR SINE MIR -24 238 30 1140 206 118 32 chr5 138010100 138010260 -61619890 - L1MC4 LINE L1 -95 7713 7568 2061 122 104 40 chr5 138010260 138010477 -61619673 - MSTA LTR MaLR 0 428 226 2252 58 3 76 chr5 138010477 138010805 -61619345 - AluY SINE Alu -7 304 1 2061 122 104 40 chr5 138010805 138010989 -61619161 - MSTA LTR MaLR -202 226 1 1140 206 118 32 chr5 138010989 138011413 -61618737 - L1MC4 LINE L1 -240 7568 7148 * 1729 248 36 41 chr5 138011380 138011976 -61618174 - L1MC4a LINE L1 -781 7027 6443 330 327 59 13 chr5 138012283 138012436 -61617714 + MIR3 SINE MIR 1 160 -48 1749 170 3 0 chr5 138012507 138012790 -61617360 - AluJb SINE Alu 0 312 29 383 125 0 69 chr5 138012751 138012791 -61617359 - AluJ/FLAM SINE Alu -235 67 33 3768 155 138 7 chr5 138012791 138013521 -61616629 + LTR1B LTR ERV1 1 826 0 383 125 0 69 chr5 138013521 138013552 -61616598 - AluJ/FLAM SINE Alu -269 33 1 1218 96 264 0 chr5 138013829 138014026 -61616124 - LTR12 LTR ERV1 -413 301 53 251 231 0 0 chr5 138014026 138014078 -61616072 - LTR30 LTR ERV1 -670 52 1 388 215 71 29 chr5 138014440 138014619 -61615531 - MER34B LTR ERV1 -25 517 355 2166 109 0 0 chr5 138014626 138014911 -61615239 - AluSq SINE Alu -12 301 17 430 95 0 0 chr5 138014913 138014981 -61615169 - MER34C LTR ERV1 -464 101 11 1949 152 3 16 chr5 138015489 138015805 -61614345 + AluJo SINE Alu 1 312 0 198 0 0 0 chr5 138016022 138016044 -61614106 + (A)n Simple_repeat Simple_repeat 1 22 0 1833 104 98 21 chr5 138016046 138016333 -61613817 + AluSx SINE Alu 1 309 -3 276 292 35 62 chr5 138017293 138017437 -61612713 + L2 LINE L2 3133 3272 0 337 281 207 0 chr5 138017613 138017748 -61612402 + MLT1J LTR MaLR 347 509 -2 1700 153 0 32 chr5 138017825 138018106 -61612044 + AluJo SINE Alu 13 284 -28 26 30 0 0 chr5 138018119 138018152 -61611998 + AT_rich Low_complexity Low_complexity 1 33 0 7980 16 0 0 chr5 138018553 138020073 -61610077 - L1PA3 LINE L1 -1 6154 4635 1865 136 52 0 chr5 138020083 138020355 -61609795 - AluSx SINE Alu -26 286 1 279 205 0 39 chr5 138020958 138021036 -61609114 - MER116 DNA Mariner 0 80 6 234 360 30 0 chr5 138021165 138021265 -61608885 - MIR SINE MIR -123 139 37 1635 151 4 23 chr5 138021275 138021540 -61608610 - AluJb SINE Alu -52 260 1 1817 216 26 82 chr5 138021945 138022519 -61607631 + MER34 LTR ERV1 1 542 0 1824 170 36 15 chr5 138022634 138022970 -61607180 - MER61A LTR ERV1 0 343 1 23 33 0 0 chr5 138023024 138023054 -61607096 + AT_rich Low_complexity Low_complexity 1 30 0 760 163 0 71 chr5 138023057 138023198 -61606952 + FLAM_C SINE Alu 1 131 -2 1945 120 10 34 chr5 138023351 138023663 -61606487 - AluSx SINE Alu 0 305 1 216 0 0 0 chr5 138024681 138024705 -61605445 + (TG)n Simple_repeat Simple_repeat 2 25 0 1838 107 80 28 chr5 138024842 138025131 -61605019 + AluSx SINE Alu 1 304 -8 2498 71 3 0 chr5 138025466 138025763 -61604387 + AluSp SINE Alu 1 298 -15 1450 162 0 125 chr5 138026417 138026762 -61603388 + AluJo SINE Alu 1 302 0 548 261 65 0 chr5 138026958 138027096 -61603054 + MIR SINE MIR 1 147 -115 972 260 116 8 chr5 138027097 138027459 -61602691 + LTR16B LTR ERVL 1 401 -63 482 129 21 32 chr5 138027463 138027556 -61602594 + MER53 DNA DNA 1 92 -97 433 214 79 8 chr5 138027638 138027764 -61602386 + MIR SINE MIR 127 261 -1 1215 174 179 98 chr5 138027827 138028340 -61601810 - MER34B LTR ERV1 -3 562 8 265 269 92 17 chr5 138128815 138128934 -61501216 + MIR SINE MIR 85 212 -50 2174 171 24 39 chr5 138129848 138130316 -61499834 + MER65C LTR ERV1 1 461 0 272 268 136 38 chr5 138130504 138130717 -61499433 + HAL1 LINE L1 2241 2474 -33 1671 162 3 30 chr5 138131188 138131484 -61498666 + AluJo SINE Alu 1 288 -24 29 47 0 0 chr5 138135328 138135371 -61494779 + AT_rich Low_complexity Low_complexity 1 43 0 555 298 84 5 chr5 138135590 138135781 -61494369 - MLT1J LTR MaLR 0 511 306 354 202 32 64 chr5 138135806 138135900 -61494250 - MLT1J LTR MaLR -177 334 244 413 320 36 36 chr5 138136145 138136395 -61493755 - L1M4 LINE L1 -3756 2390 2141 25 0 0 0 chr5 138136427 138136452 -61493698 + AT_rich Low_complexity Low_complexity 1 25 0 360 221 71 80 chr5 138136853 138136966 -61493184 + MLT1J LTR MaLR 228 339 -172 310 209 47 35 chr5 138136986 138137072 -61493078 + MLT1J LTR MaLR 317 403 -108 482 330 115 33 chr5 138137898 138138410 -61491740 - HAL1 LINE L1 -1517 990 437 3773 146 71 6 chr5 138139544 138140208 -61489942 - MER39 LTR ERV1 0 707 1 13377 188 30 22 chr5 138142030 138144253 -61485897 - L1MA3 LINE L1 0 7724 5519 1507 109 45 0 chr5 138144253 138144473 -61485677 + MER30 DNA MER1_type 1 230 0 13377 188 30 22 chr5 138144473 138149555 -61480595 - L1MA3 LINE L1 -2205 5519 21 366 307 101 18 chr5 138150408 138150626 -61479524 + MER65C-int LTR ERV1 135 370 -6279 1992 296 56 48 chr5 138151279 138153662 -61476488 + MER65C-int LTR ERV1 954 3812 -3973 44031 37 2 1 chr5 138153684 138159834 -61470316 - L1PA3 LINE L1 -1 6154 1 2250 324 42 35 chr5 138159979 138161851 -61468299 + LOR1a-int LTR ERV1 2852 5756 -2029 1814 311 39 48 chr5 138162617 138163812 -61466338 + LOR1a-int LTR ERV1 5329 6511 -138 1071 321 35 12 chr5 138164488 138164968 -61465182 + L1ME LINE L1 8 498 -5572 3067 271 87 17 chr5 138165076 138166838 -61463312 + L1ME LINE L1 2267 4158 -1922 1729 178 134 0 chr5 138166978 138167337 -61462813 + LOR1a LTR ERV1 89 495 -2 832 264 19 31 chr5 138167340 138167658 -61462492 + L1ME LINE L1 4392 4705 -1375 * 3128 168 8 39 chr5 138167650 138168287 -61461863 + L1 LINE L1 3643 4259 -1887 207 69 0 0 chr5 138169111 138169140 -61461010 + (CA)n Simple_repeat Simple_repeat 2 30 0 264 182 111 40 chr5 138171337 138171436 -61458714 - MER104 DNA Tc2 -61 119 14 249 97 0 65 chr5 138171899 138171961 -61458189 + (TTCTCC)n Simple_repeat Simple_repeat 6 63 0 27 29 0 0 chr5 138173083 138173117 -61457033 + AT_rich Low_complexity Low_complexity 1 34 0 26 30 0 0 chr5 138173221 138173254 -61456896 + AT_rich Low_complexity Low_complexity 1 33 0 6286 138 10 10 chr5 138173259 138173961 -61456189 + L1MC1 LINE L1 5309 6013 -320 3615 101 0 12 chr5 138173961 138174478 -61455672 + MER9 LTR ERVK 1 511 0 6286 138 10 10 chr5 138174478 138174791 -61455359 + L1MC1 LINE L1 6012 6324 -9 1903 182 5 3 chr5 138175398 138175777 -61454373 + L1MA4 LINE L1 3935 4314 -1832 708 92 9 9 chr5 138175779 138175888 -61454262 + MSTA-int LTR MaLR 1543 1651 0 2039 141 120 5 chr5 138175888 138176272 -61453878 + MSTA LTR MaLR 1 428 0 4017 156 63 6 chr5 138176287 138177013 -61453137 + L1MA4 LINE L1 5254 6021 -279 372 186 35 0 chr5 138177016 138177102 -61453048 + L1MB3 LINE L1 6087 6175 -8 1995 203 26 11 chr5 138177431 138177895 -61452255 + Charlie1 DNA MER1_type 2097 2567 -194 22 56 0 0 chr5 138178271 138178307 -61451843 + AT_rich Low_complexity Low_complexity 1 36 0 2636 240 28 76 chr5 138179253 138180465 -61449685 + L1M4 LINE L1 2453 3606 -2540 21 0 0 0 chr5 138181648 138181669 -61448481 + AT_rich Low_complexity Low_complexity 1 21 0 291 109 14 44 chr5 138182987 138183058 -61447092 - L1MA5 LINE L1 -2 6301 6230 386 376 0 8 chr5 138183070 138183195 -61446955 + L2 LINE L2 3141 3264 -8 388 328 78 2 chr5 138183328 138183513 -61446637 - MIR SINE MIR -63 199 3 353 289 156 28 chr5 138184790 138185001 -61445149 + L1MC4a LINE L1 5776 6013 -1795 522 346 48 11 chr5 138185414 138185767 -61444383 + L1MC4a LINE L1 5563 5928 -1880 24 0 0 0 chr5 138185939 138185963 -61444187 + AT_rich Low_complexity Low_complexity 1 24 0 500 301 27 90 chr5 138186674 138187039 -61443111 - L2 LINE L2 -4 3309 2968 756 273 79 18 chr5 138187080 138187358 -61442792 - L2 LINE L2 -1154 2160 1866 2909 174 22 2 chr5 138187549 138188059 -61442091 - MLT2B1 LTR ERVL 0 520 1 28 48 0 0 chr5 138188215 138188257 -61441893 + AT_rich Low_complexity Low_complexity 1 42 0 1781 176 91 12 chr5 138188257 138188598 -61441552 - MSTA LTR MaLR -60 368 1 4630 208 23 0 chr5 138188645 138189676 -61440474 - L1 LINE L1 -2109 4037 2983 4203 189 6 0 chr5 138189674 138190556 -61439594 + L1P LINE L1 2806 3693 -3169 * 296 286 95 17 chr5 138190719 138191013 -61439137 - L1M4 LINE L1 -2989 3157 2841 1111 226 44 53 chr5 138192552 138192870 -61437280 + MLT2C1 LTR ERVL 27 341 -56 313 175 48 0 chr5 138193378 138193441 -61436709 + MLT1E3 LTR MaLR 559 624 0 879 343 47 30 chr5 138193490 138193584 -61436566 + MERVL LTR ERVL 3091 3182 -2582 1624 205 67 88 chr5 138193584 138194150 -61436000 - MLT2B3 LTR ERVL 0 554 1 879 343 47 30 chr5 138194150 138194592 -61435558 + MERVL LTR ERVL 3182 3636 -2128 254 281 45 39 chr5 138194811 138194989 -61435161 + MERVL LTR ERVL 5146 5324 -161 431 323 6 44 chr5 138195222 138195380 -61434770 + LTR16C LTR ERVL 87 238 -253 471 254 9 0 chr5 138195673 138195787 -61434363 - Charlie2a DNA MER1_type -1198 1664 1550 205 207 24 12 chr5 138195835 138195917 -61434233 + (TAGA)n Simple_repeat Simple_repeat 2 84 0 2877 162 32 13 chr5 138195935 138196461 -61433689 - MER34B LTR ERV1 -29 536 1 363 289 29 10 chr5 138196633 138196737 -61433413 - Charlie2 DNA MER1_type -2585 277 172 271 326 68 8 chr5 138196920 138197052 -61433098 + MIR SINE MIR 68 207 -55 216 0 0 0 chr5 138199554 138199578 -61430572 + (A)n Simple_repeat Simple_repeat 1 24 0 216 296 127 0 chr5 138199830 138199901 -61430249 - MIR3 SINE MIR -9 199 120 271 227 168 99 chr5 138199992 138200296 -61429854 - MER102b DNA MER1_type -28 313 2 3359 114 12 2 chr5 138201136 138201628 -61428522 - LOR1a LTR ERV1 0 497 1 204 303 91 23 chr5 138202115 138202247 -61427903 - L3b LINE CR1 -332 1251 1111 549 315 6 22 chr5 138203664 138203845 -61426305 + MER45A DNA AcHobo 1 178 0 233 297 0 0 chr5 138203953 138204017 -61426133 + GA-rich Low_complexity Low_complexity 1 64 0 24 53 0 0 chr5 138207441 138207479 -61422671 + AT_rich Low_complexity Low_complexity 1 38 0 304 315 23 8 chr5 138212681 138212811 -61417339 + MER103 DNA DNA 4 135 -31 596 210 40 0 chr5 138214019 138214143 -61416007 - Charlie1b DNA MER1_type 0 523 395 1080 234 55 7 chr5 138214163 138214437 -61415713 - Charlie1b DNA MER1_type -236 287 1 289 249 81 44 chr5 138214741 138214859 -61415291 - MIR SINE MIR -65 143 48 1305 292 106 16 chr5 138215268 138215844 -61414306 + MER20B DNA MER1_type 110 737 -46 14753 180 47 16 chr5 138216042 138220742 -61409408 - L1MA3 LINE L1 0 7724 3169 237 33 0 0 chr5 138220742 138220772 -61409378 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 14753 180 47 16 chr5 138220772 138222763 -61407387 - L1MA3 LINE L1 -4555 3169 126 2249 109 3 0 chr5 138222763 138223065 -61407085 - AluSq SINE Alu -7 306 4 14753 180 47 16 chr5 138223065 138223184 -61406966 - L1MA3 LINE L1 -7598 126 12 26 0 0 0 chr5 138224509 138224535 -61405615 + AT_rich Low_complexity Low_complexity 1 26 0 365 287 30 43 chr5 138224611 138224775 -61405375 + MIR SINE MIR 31 192 -70 210 371 24 8 chr5 138225191 138225315 -61404835 + L2 LINE L2 2198 2323 -991 2071 116 14 3 chr5 138226236 138226528 -61403622 + AluSx SINE Alu 1 295 -17 22 35 0 0 chr5 138226847 138226876 -61403274 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 138227197 138227226 -61402924 + AT_rich Low_complexity Low_complexity 1 29 0 2819 3 0 10 chr5 138227385 138227699 -61402451 - AluYa5 SINE Alu 0 311 1 258 187 125 18 chr5 138229027 138229130 -61401020 - MLT1I LTR MaLR -43 407 295 1721 142 44 78 chr5 138229365 138229752 -61400398 + THE1C LTR MaLR 2 375 0 2505 162 20 13 chr5 138229893 138230343 -61399807 + Tigger1 DNA MER2_type 2 454 -1964 7972 155 8 1 chr5 138230343 138230672 -61399478 + L1PA8 LINE L1 4000 4325 -1847 2108 105 0 16 chr5 138230672 138230978 -61399172 + AluSg SINE Alu 1 301 -9 7972 155 8 1 chr5 138230978 138231660 -61398490 + L1PA8 LINE L1 4325 5001 -1171 1490 60 11 0 chr5 138231660 138231844 -61398306 + AluY SINE Alu 116 301 -10 7972 155 8 1 chr5 138231844 138233022 -61397128 + L1PA8 LINE L1 5001 6171 -1 4765 70 31 2 chr5 138233041 138233682 -61396468 + L1PA8 LINE L1 5487 6146 -26 636 14 0 0 chr5 138233684 138233757 -61396393 + (TAAAA)n Simple_repeat Simple_repeat 1 73 0 22 0 0 0 chr5 138233904 138233926 -61396224 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr5 138234893 138234923 -61395227 + AT_rich Low_complexity Low_complexity 1 30 0 594 348 18 14 chr5 138235667 138235888 -61394262 - MIR SINE MIR -14 248 27 6612 25 0 4 chr5 138239158 138239946 -61390204 - L1P LINE L1 -1401 4745 3961 1583 85 23 47 chr5 138239946 138240204 -61389946 + MER61-int LTR ERV1 2778 3029 -2188 360 43 0 0 chr5 138240400 138240446 -61389704 + (CA)n Simple_repeat Simple_repeat 1 46 0 392 298 118 22 chr5 138240524 138240702 -61389448 - MIR SINE MIR -50 212 18 191 339 0 16 chr5 138242270 138242332 -61387818 + L2 LINE L2 3007 3067 -205 1598 162 96 10 chr5 138242942 138243256 -61386894 + MER61A LTR ERV1 1 341 -2 265 59 0 0 chr5 138243365 138243399 -61386751 + HSMAR1 DNA Mariner 1254 1287 0 270 259 0 0 chr5 138243760 138243818 -61386332 - MLT1L LTR MaLR -557 58 1 479 336 49 28 chr5 138243824 138244356 -61385794 + HAL1 LINE L1 1125 1667 -840 283 259 9 18 chr5 138245034 138245146 -61385004 + L1M4 LINE L1 2440 2550 -3596 23 54 0 0 chr5 138245345 138245382 -61384768 + AT_rich Low_complexity Low_complexity 1 37 0 1978 131 0 7 chr5 138245532 138245829 -61384321 - AluY SINE Alu -16 295 1 1754 165 11 0 chr5 138246049 138246328 -61383822 + AluJb SINE Alu 1 282 -30 21 36 0 0 chr5 138246708 138246736 -61383414 + AT_rich Low_complexity Low_complexity 1 28 0 931 232 51 167 chr5 138246762 138247259 -61382891 + L2 LINE L2 1263 1816 -1498 369 0 0 0 chr5 138247259 138247300 -61382850 + (TC)n Simple_repeat Simple_repeat 1 41 0 192 97 0 0 chr5 138247299 138247330 -61382820 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 931 232 51 167 chr5 138247300 138247639 -61382511 + L2 LINE L2 1816 1975 -1339 211 304 0 0 chr5 138247753 138247822 -61382328 + (CA)n Simple_repeat Simple_repeat 2 70 0 763 241 82 19 chr5 138247830 138248037 -61382113 + L2 LINE L2 3094 3313 0 351 0 0 0 chr5 138248388 138248427 -61381723 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 225 196 0 0 chr5 138250710 138250756 -61379394 + (CA)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr5 138251313 138251334 -61378816 + AT_rich Low_complexity Low_complexity 1 21 0 267 276 97 62 chr5 138251895 138252137 -61378013 + MIR SINE MIR 2 258 -4 31 88 0 0 chr5 138252502 138252582 -61377568 + AT_rich Low_complexity Low_complexity 1 80 0 1810 112 0 90 chr5 138253038 138253360 -61376790 + AluSx SINE Alu 1 293 -19 504 218 296 0 chr5 138253611 138253753 -61376397 + MER5A DNA MER1_type 6 189 0 1571 222 137 17 chr5 138253842 138254435 -61375715 - MER39 LTR ERV1 0 707 6 1653 183 0 0 chr5 138254464 138254738 -61375412 + AluJo SINE Alu 24 297 -15 2379 167 14 27 chr5 138254934 138255372 -61374778 + MSTB1 LTR MaLR 1 432 0 922 227 58 70 chr5 138255635 138256032 -61374118 + L1ME3A LINE L1 5775 6166 -4 1389 201 29 29 chr5 138256112 138256390 -61373760 + AluJo SINE Alu 5 282 -30 1399 161 34 22 chr5 138256433 138256700 -61373450 - MER89 LTR ERV1 -14 545 276 475 243 27 0 chr5 138256813 138256924 -61373226 - MER89 LTR ERV1 -445 114 1 1024 287 47 28 chr5 138257100 138257529 -61372621 + L1MC4a LINE L1 5466 5902 -1906 195 42 0 0 chr5 138257538 138257562 -61372588 + (CA)n Simple_repeat Simple_repeat 2 25 0 2019 143 29 3 chr5 138257625 138257959 -61372191 + MER7A DNA MER2_type 2 346 0 371 296 102 64 chr5 138258012 138258404 -61371746 + L1MC4a LINE L1 5510 5916 -1892 293 246 30 61 chr5 138258595 138258708 -61371442 - MLT1J2 LTR MaLR -238 171 67 22 35 0 0 chr5 138258885 138258914 -61371236 + AT_rich Low_complexity Low_complexity 1 29 0 450 362 54 54 chr5 138258996 138259383 -61370767 - L2 LINE L2 -1669 1645 1259 2040 118 0 0 chr5 138259860 138260164 -61369986 + AluY SINE Alu 1 304 0 759 272 125 1 chr5 138260277 138260634 -61369516 - MLT2F LTR ERVL -81 582 139 14861 193 42 29 chr5 138260660 138265523 -61364627 + L1PA13 LINE L1 2 4999 -1798 2016 126 0 7 chr5 138265520 138265829 -61364321 + L1PB1 LINE L1 5783 6089 -62 * 25 51 0 0 chr5 138265845 138265884 -61364266 + AT_rich Low_complexity Low_complexity 1 39 0 336 224 15 0 chr5 138265907 138265974 -61364176 - MLT2F LTR ERVL -566 97 30 185 433 47 13 chr5 138266531 138266681 -61363469 - L2 LINE L2 -2052 1262 1108 284 277 40 10 chr5 138267319 138267420 -61362730 - L2 LINE L2 -210 3062 2959 2477 278 80 96 chr5 138268588 138269209 -61360941 + L2 LINE L2 8 638 -2676 278 281 31 0 chr5 138269209 138269305 -61360845 - MER94 DNA DNA -34 100 2 2477 278 80 96 chr5 138269305 138269735 -61360415 + L2 LINE L2 638 1074 -2240 2228 121 16 29 chr5 138269735 138270115 -61360035 - THE1C LTR MaLR 0 375 1 2477 278 80 96 chr5 138270115 138270204 -61359946 + L2 LINE L2 1074 1163 -2151 183 80 0 0 chr5 138270204 138270229 -61359921 + (CA)n Simple_repeat Simple_repeat 2 26 0 2477 278 80 96 chr5 138270229 138270582 -61359568 + L2 LINE L2 1163 1572 -1742 318 291 40 112 chr5 138270880 138271176 -61358974 - ERVL LTR ERVL -4101 1663 1389 21 0 0 0 chr5 138271543 138271564 -61358586 + AT_rich Low_complexity Low_complexity 1 21 0 542 286 62 50 chr5 138273474 138274052 -61356098 + L1MC/D LINE L1 4400 4984 -1162 1944 167 0 0 chr5 138274191 138274491 -61355659 + AluSx SINE Alu 1 300 -12 367 312 109 36 chr5 138274589 138275009 -61355141 + L1MC/D LINE L1 5295 5745 -2063 31 0 0 0 chr5 138275316 138275347 -61354803 + AT_rich Low_complexity Low_complexity 1 31 0 322 266 8 40 chr5 138276433 138276557 -61353593 + MIR SINE MIR 128 247 -15 2200 104 0 0 chr5 138277412 138277701 -61352449 + AluSg SINE Alu 1 289 -21 1753 162 0 11 chr5 138278826 138279110 -61351040 + AluJb SINE Alu 22 302 -10 2401 107 0 0 chr5 138279629 138279939 -61350211 + AluSx SINE Alu 1 310 -2 1454 192 105 13 chr5 138283498 138283811 -61346339 + MER61A LTR ERV1 1 342 -1 1074 144 0 0 chr5 138284014 138284194 -61345956 + (TA)n Simple_repeat Simple_repeat 1 180 0 2283 81 3 7 chr5 138284194 138284489 -61345661 - AluSg SINE Alu -16 294 1 2157 114 0 0 chr5 138284489 138284778 -61345372 - AluSx SINE Alu -23 289 1 1009 252 65 39 chr5 138284919 138285352 -61344798 - L1ME3A LINE L1 -26 6144 5701 3437 191 8 9 chr5 138286036 138286690 -61343460 - MER82 DNA MER2_type 0 653 1 23 0 0 0 chr5 138287960 138287983 -61342167 + AT_rich Low_complexity Low_complexity 1 23 0 1328 233 87 62 chr5 138290678 138290799 -61339351 - LTR9 LTR ERV1 0 612 496 1694 104 127 4 chr5 138290799 138291081 -61339069 + AluSx SINE Alu 1 312 0 1328 233 87 62 chr5 138291081 138291556 -61338594 - LTR9 LTR ERV1 -116 496 1 254 231 0 0 chr5 138292336 138292388 -61337762 + LTR30 LTR ERV1 1 52 -670 2333 95 147 160 chr5 138292388 138293002 -61337148 + LTR12 LTR ERV1 57 2438 0 225 0 0 0 chr5 138293033 138293058 -61337092 + (A)n Simple_repeat Simple_repeat 1 25 0 652 287 10 10 chr5 138293200 138293395 -61336755 + MER20 DNA MER1_type 24 218 -1 1963 83 16 0 chr5 138293453 138293707 -61336443 - AluY SINE Alu -8 303 46 276 275 140 22 chr5 138294206 138294523 -61335627 - L1MC/D LINE L1 -297 5824 5564 318 279 158 0 chr5 138294547 138294762 -61335388 - L1MC/D LINE L1 -2296 5512 5264 28 29 0 0 chr5 138294908 138294943 -61335207 + AT_rich Low_complexity Low_complexity 1 35 0 2023 117 4 0 chr5 138294969 138295243 -61334907 - AluSp SINE Alu -4 309 35 277 291 187 0 chr5 138295291 138295494 -61334656 - L1MC/D LINE L1 -1182 4964 4724 1988 135 13 13 chr5 138295705 138296009 -61334141 - AluSx SINE Alu -8 304 1 2753 16 0 0 chr5 138298194 138298501 -61331649 - AluYa5 SINE Alu -4 307 1 802 198 39 0 chr5 138299335 138299517 -61330633 - MER53 DNA DNA 0 189 1 20108 153 47 5 chr5 138299556 138301777 -61328373 + L1M1 LINE L1 17 2144 -5421 2360 76 3 17 chr5 138301777 138302079 -61328071 + AluSg SINE Alu 1 298 -12 20108 153 47 5 chr5 138302079 138302587 -61327563 + L1M1 LINE L1 2144 2629 -4936 195 42 0 0 chr5 138302587 138302611 -61327539 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 20108 153 47 5 chr5 138302611 138303268 -61326882 + L1M1 LINE L1 2629 3545 -4020 2411 217 103 97 chr5 138303330 138304444 -61325706 + L1MD2 LINE L1 5225 6347 -12 2025 135 0 26 chr5 138304685 138304996 -61325154 + AluSx SINE Alu 1 303 -9 6697 91 20 12 chr5 138305000 138306001 -61324149 - L1PA7 LINE L1 -832 5314 4306 2569 66 8 36 chr5 138306003 138306138 -61324012 + L1PA7 LINE L1 5342 5479 -675 2661 30 3 0 chr5 138306138 138306443 -61323707 + AluY SINE Alu 1 306 -5 2569 66 8 36 chr5 138306443 138306671 -61323479 + L1PA7 LINE L1 5479 5695 -459 5055 56 4 3 chr5 138306671 138307795 -61322355 + MER11A LTR ERVK 1 1265 -1 3675 55 0 11 chr5 138307795 138308265 -61321885 + L1PA7 LINE L1 5689 6153 -1 25 83 0 0 chr5 138309989 138310049 -61320101 + AT_rich Low_complexity Low_complexity 1 60 0 901 233 91 32 chr5 138310187 138310440 -61319710 + MLT1H1 LTR MaLR 7 274 -281 255 211 113 0 chr5 138310545 138310616 -61319534 + MLT1H1 LTR MaLR 459 537 -18 2039 194 65 10 chr5 138310644 138311042 -61319108 - MSTB LTR MaLR -6 420 1 891 283 53 38 chr5 138311781 138312442 -61317708 + L1M1 LINE L1 3576 4246 -3319 767 274 59 29 chr5 138312528 138313054 -61317096 + L1M1 LINE L1 4281 4822 -2743 4252 315 30 27 chr5 138313104 138314748 -61315402 + L1M2a LINE L1 402 2050 -5516 227 231 0 0 chr5 138314747 138314799 -61315351 + L1M2a LINE L1 2444 2495 -5001 * 6562 225 45 45 chr5 138314812 138316426 -61313724 + L1MA9 LINE L1 2373 3986 -3666 2191 79 3 54 chr5 138316426 138316741 -61313409 - AluY SINE Alu -12 299 1 6562 225 45 45 chr5 138316741 138317949 -61312201 + L1MA9 LINE L1 3986 5193 -2459 2128 156 5 16 chr5 138317949 138317960 -61312190 + L1PB1 LINE L1 5782 5792 -359 378 0 0 0 chr5 138317960 138318002 -61312148 + (CA)n Simple_repeat Simple_repeat 2 43 0 2128 156 5 16 chr5 138318002 138318362 -61311788 + L1PB1 LINE L1 5792 6149 -2 6562 225 45 45 chr5 138318362 138318553 -61311597 + L1MA9 LINE L1 5193 5383 -2269 2188 112 7 0 chr5 138318553 138318856 -61311294 - AluY SINE Alu -6 305 1 6562 225 45 45 chr5 138318856 138320377 -61309773 + L1MA9 LINE L1 5383 6909 -743 641 114 0 0 chr5 138320382 138320470 -61309680 + L1PA6 LINE L1 11 98 -6048 * 33730 83 13 7 chr5 138320439 138325986 -61304164 + L1PA6 LINE L1 580 6152 -2 1847 222 74 23 chr5 138325996 138326297 -61303853 + L1MA9 LINE L1 6887 7226 -505 325 69 17 17 chr5 138326297 138326355 -61303795 + (TG)n Simple_repeat Simple_repeat 2 59 0 1847 222 74 23 chr5 138326355 138326566 -61303584 + L1MA9 LINE L1 7226 7425 -306 461 79 0 0 chr5 138326569 138326632 -61303518 + Tigger3(Golem) DNA MER2_type 2890 2952 -77 1208 219 122 85 chr5 138326812 138326925 -61303225 + L1ME3A LINE L1 5333 5440 -730 180 77 0 0 chr5 138326925 138326951 -61303199 + (TA)n Simple_repeat Simple_repeat 1 26 0 1208 219 122 85 chr5 138326951 138327412 -61302738 + L1ME3A LINE L1 5440 5928 -242 631 322 152 7 chr5 138327415 138327698 -61302452 + LTR16A LTR ERVL 4 327 -123 456 182 220 8 chr5 138327819 138327951 -61302199 + L1ME3A LINE L1 6006 6165 -5 31 26 0 0 chr5 138327974 138328012 -61302138 + AT_rich Low_complexity Low_complexity 1 38 0 219 254 30 15 chr5 138328049 138328116 -61302034 + MIR SINE MIR 72 139 -69 349 324 17 46 chr5 138328157 138328330 -61301820 - MIR SINE MIR -56 206 39 198 0 0 0 chr5 138328685 138328707 -61301443 + (GA)n Simple_repeat Simple_repeat 2 23 0 1999 137 0 24 chr5 138329516 138329808 -61300342 + AluSx SINE Alu 3 287 -25 2108 140 15 108 chr5 138331086 138331549 -61298601 + MSTB LTR MaLR 5 424 -2 944 261 21 39 chr5 138332593 138332930 -61297220 - MER46C DNA MER2_type 0 338 8 280 246 198 8 chr5 138333991 138334117 -61296033 - MLT1J LTR MaLR -38 473 324 379 235 24 0 chr5 138334236 138334321 -61295829 - MLT1J LTR MaLR -369 142 56 350 197 66 0 chr5 138334322 138334398 -61295752 - MER57A LTR ERV1 0 403 323 4477 143 79 4 chr5 138334447 138335215 -61294935 - LTR1B LTR ERV1 0 826 1 502 303 65 34 chr5 138335238 138335589 -61294561 + MER57A LTR ERV1 68 403 0 311 242 0 0 chr5 138335608 138335670 -61294480 + MLT1J LTR MaLR 81 142 -369 1871 152 25 9 chr5 138335763 138336079 -61294071 - LTR1B LTR ERV1 -113 713 393 846 197 11 11 chr5 138336088 138336271 -61293879 - L1 LINE L1 -1216 4930 4748 5352 159 20 30 chr5 138336271 138337343 -61292807 + L1 LINE L1 3674 4735 -1411 261 278 14 14 chr5 138337843 138337915 -61292235 - ERVL LTR ERVL -852 4912 4841 357 387 34 0 chr5 138338603 138338838 -61291312 + ERVL LTR ERVL 2678 2920 -2844 1033 347 70 20 chr5 138338893 138339645 -61290505 + ERVL LTR ERVL 2981 3770 -1884 861 320 92 11 chr5 138339646 138340162 -61289988 - L1ME1 LINE L1 -1 6183 5584 302 299 104 37 chr5 138340482 138340646 -61289504 + ERVL LTR ERVL 4156 4330 -1434 289 311 38 9 chr5 138340851 138340957 -61289193 + ERVL LTR ERVL 4669 4777 -987 1998 145 47 44 chr5 138340971 138341112 -61289038 + MLT1B LTR MaLR 3 142 -248 1880 199 28 6 chr5 138341112 138341468 -61288682 + MLT1A1 LTR MaLR 1 364 -1 1998 145 47 44 chr5 138341468 138341713 -61288437 + MLT1B LTR MaLR 142 390 0 319 264 67 43 chr5 138342422 138342630 -61287520 - L1ME LINE L1 -318 5803 5591 1842 169 103 10 chr5 138342668 138343065 -61287085 + MER61C LTR ERV1 14 431 -3 21 36 0 0 chr5 138343115 138343143 -61287007 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 138345446 138345468 -61284682 + AT_rich Low_complexity Low_complexity 1 22 0 457 247 12 53 chr5 138345979 138346149 -61284001 - L1ME2 LINE L1 -49 6115 5953 2363 88 8 72 chr5 138346156 138346533 -61283617 + THE1A LTR MaLR 2 354 -1 11216 110 4 2 chr5 138346534 138348111 -61282039 + THE1A-int LTR MaLR 1 1580 0 1342 86 0 45 chr5 138348113 138348311 -61281839 + THE1A LTR MaLR 3 191 -164 1416 92 0 14 chr5 138348311 138348518 -61281632 - THE1A-int LTR MaLR -1375 205 2 1141 78 20 0 chr5 138348519 138348672 -61281478 - THE1A LTR MaLR 0 355 200 653 344 42 0 chr5 138348953 138349212 -61280938 + L2 LINE L2 2533 2802 -512 2756 156 42 18 chr5 138349212 138349758 -61280392 - MER89 LTR ERV1 0 559 1 436 326 91 36 chr5 138349858 138350165 -61279985 + L2 LINE L2 2986 3309 -4 498 318 36 62 chr5 138351769 138352074 -61278076 + MER102b DNA MER1_type 36 332 -9 3211 179 109 21 chr5 138353030 138353789 -61276361 - LTR1B LTR ERV1 0 826 1 195 69 0 0 chr5 138353801 138353830 -61276320 + (CA)n Simple_repeat Simple_repeat 1 29 0 542 265 68 19 chr5 138356390 138356552 -61273598 - MIR SINE MIR -65 197 28 5331 97 2 30 chr5 138357375 138358172 -61271978 - L1PB1 LINE L1 -1 6150 5376 745 278 102 32 chr5 138358238 138358665 -61271485 - MLT1J LTR MaLR -2 470 1 1944 84 34 90 chr5 138359128 138359450 -61270700 + AluSp SINE Alu 1 304 -9 24 32 0 0 chr5 138360169 138360200 -61269950 + AT_rich Low_complexity Low_complexity 1 31 0 278 133 44 0 chr5 138360898 138360943 -61269207 - L2 LINE L2 0 3313 3267 1016 245 190 27 chr5 138361128 138361680 -61268470 + HAL1 LINE L1 591 1232 -1275 443 247 129 24 chr5 138361687 138361942 -61268208 + HAL1 LINE L1 1251 1532 -975 566 262 24 6 chr5 138361987 138362151 -61267999 + MER58B DNA MER1_type 174 340 -1 1384 287 60 32 chr5 138362153 138362871 -61267279 + HAL1 LINE L1 1536 2273 -234 445 303 96 5 chr5 138364331 138364519 -61265631 - MIR SINE MIR -2 260 56 2926 184 151 25 chr5 138364750 138365483 -61264667 - LTR1B LTR ERV1 0 826 1 1732 241 158 20 chr5 138366051 138366159 -61263991 + Charlie7 DNA MER1_type 1482 1574 -1038 1177 201 136 19 chr5 138366159 138366483 -61263667 + MLT1A1 LTR MaLR 1 362 -3 1732 241 158 20 chr5 138366483 138367283 -61262867 + Charlie7 DNA MER1_type 1574 2516 -96 25 0 0 0 chr5 138368185 138368210 -61261940 + AT_rich Low_complexity Low_complexity 1 25 0 197 372 11 11 chr5 138371863 138371957 -61258193 + L3b LINE CR1 1243 1336 -247 2257 102 3 0 chr5 138372655 138372948 -61257202 + AluSc SINE Alu 1 294 -15 1244 148 181 0 chr5 138373081 138373324 -61256826 + Tigger1 DNA MER2_type 1 287 -2131 1134 124 7 10 chr5 138373325 138373616 -61256534 - THE1C LTR MaLR -2 373 1 * 13632 121 24 7 chr5 138373616 138375713 -61254437 + Tigger1 DNA MER2_type 284 2418 0 395 315 58 70 chr5 138375866 138376107 -61254043 + MIR SINE MIR 7 244 -18 25 65 0 0 chr5 138376374 138376420 -61253730 + AT_rich Low_complexity Low_complexity 1 46 0 220 284 110 55 chr5 138376884 138377011 -61253139 + L2 LINE L2 3179 3312 -1 322 276 35 0 chr5 138377207 138377294 -61252856 + L2 LINE L2 3183 3272 0 188 286 95 24 chr5 138378005 138378089 -61252061 - MIR SINE MIR 0 262 173 585 219 238 0 chr5 138378188 138378352 -61251798 - MER20 DNA MER1_type 0 219 17 383 278 166 7 chr5 138379290 138379525 -61250625 - L1M4 LINE L1 -1037 5109 4820 423 0 0 0 chr5 138379525 138379572 -61250578 + (CA)n Simple_repeat Simple_repeat 2 48 0 383 278 166 7 chr5 138379572 138379620 -61250530 - L1M4 LINE L1 -1326 4820 4781 402 255 48 7 chr5 138379654 138379799 -61250351 - L1M4 LINE L1 -1301 4845 4695 43973 42 2 1 chr5 138379814 138385956 -61244194 - L1PA4 LINE L1 -3 6152 1 1322 236 95 47 chr5 138385954 138386607 -61243543 - L1M4 LINE L1 -1431 4715 4022 * 2166 113 0 7 chr5 138386607 138386916 -61243234 - AluSg1 SINE Alu 0 309 3 1322 236 95 47 chr5 138386916 138386987 -61243163 - L1M4 LINE L1 -2124 4022 3956 2273 179 35 2 chr5 138387011 138387407 -61242743 + MSTA LTR MaLR 20 428 0 6148 181 16 23 chr5 138387407 138388556 -61241594 + MSTA-int LTR MaLR 1 1142 -509 1601 170 41 3 chr5 138388558 138388852 -61241298 + MSTA LTR MaLR 124 428 0 652 249 42 10 chr5 138388855 138389048 -61241102 - L1M4 LINE L1 -2194 3952 3754 2201 141 88 5 chr5 138389051 138389427 -61240723 - MSTA LTR MaLR 0 428 22 439 278 1 71 chr5 138389465 138389714 -61240436 - L1M4 LINE L1 -2391 3755 3520 544 234 115 27 chr5 138389766 138390027 -61240123 + L1ME2 LINE L1 4881 5164 -982 * 1831 244 70 13 chr5 138390023 138390622 -61239528 + L1ME2 LINE L1 5406 6038 -126 268 370 11 22 chr5 138390730 138390911 -61239239 + LTR16C LTR ERVL 299 477 -14 26 0 0 0 chr5 138391327 138391353 -61238797 + AT_rich Low_complexity Low_complexity 1 26 0 349 173 53 13 chr5 138391379 138391454 -61238696 + L1ME2 LINE L1 6076 6153 -11 754 246 68 5 chr5 138391492 138391699 -61238451 + L1ME3A LINE L1 5939 6158 -12 296 184 46 46 chr5 138392386 138392473 -61237677 - LTR67 LTR ERVL 0 557 471 267 302 50 66 chr5 138392788 138392970 -61237180 + LTR16C LTR ERVL 299 477 -14 259 261 11 22 chr5 138393491 138393583 -61236567 + L1MDa LINE L1 25 115 -6425 502 121 9 78 chr5 138393640 138394115 -61236035 + (TA)n Simple_repeat Simple_repeat 1 442 0 403 151 12 87 chr5 138394157 138394732 -61235418 + (TA)n Simple_repeat Simple_repeat 1 532 0 229 247 11 21 chr5 138394744 138394837 -61235313 + (TA)n Simple_repeat Simple_repeat 2 93 0 243 215 3 41 chr5 138394849 138395152 -61234998 + (TA)n Simple_repeat Simple_repeat 1 291 0 708 233 43 114 chr5 138395154 138395523 -61234627 + L1MDa LINE L1 91 433 -6107 698 184 0 0 chr5 138395832 138395941 -61234209 + FRAM SINE Alu 36 144 -32 201 195 0 0 chr5 138395945 138395986 -61234164 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 26 50 0 0 chr5 138396269 138396309 -61233841 + AT_rich Low_complexity Low_complexity 1 40 0 12084 193 108 8 chr5 138396346 138398983 -61231167 - L1 LINE L1 -3939 2909 7 5528 138 17 11 chr5 138398992 138399829 -61230321 + HSMAR2 DNA Mariner 399 1243 -59 949 70 0 0 chr5 138399829 138399957 -61230193 - L1PA4 LINE L1 0 6155 6028 5528 138 17 11 chr5 138399957 138400017 -61230133 + HSMAR2 DNA Mariner 1243 1301 -1 273 307 66 22 chr5 138400161 138400298 -61229852 - MIR SINE MIR -56 206 64 1763 168 3 14 chr5 138400677 138400968 -61229182 + AluJb SINE Alu 3 290 -22 555 186 64 14 chr5 138401680 138401820 -61228330 + L1MD3 LINE L1 7767 7913 -82 * 12815 149 16 14 chr5 138401807 138408161 -61221989 + L1PA8 LINE L1 4 6484 -3 507 169 45 0 chr5 138408161 138408250 -61221900 + L1MD3 LINE L1 7892 7984 -11 790 273 74 29 chr5 138408691 138409037 -61221113 - MLT1K LTR MaLR -22 566 141 347 85 0 0 chr5 138410920 138410967 -61219183 - FAM SINE Alu -4 171 125 290 184 0 0 chr5 138410989 138411038 -61219112 + MLT1L LTR MaLR 565 613 -2 370 316 92 31 chr5 138411063 138411259 -61218891 - MLT1J LTR MaLR 0 511 304 430 247 39 26 chr5 138411574 138411728 -61218422 + L2 LINE L2 2233 2388 -926 1156 216 28 65 chr5 138411728 138412151 -61217999 + MLT2B1 LTR ERVL 1 451 -13 832 311 76 60 chr5 138412158 138412708 -61217442 + L2 LINE L2 2359 2917 -397 339 304 61 48 chr5 138412778 138413008 -61217142 + L2 LINE L2 3077 3309 -4 505 273 106 0 chr5 138413010 138413171 -61216979 - L2 LINE L2 0 3313 3136 258 241 165 38 chr5 138414095 138414228 -61215922 - MIR SINE MIR -2 260 111 318 314 48 16 chr5 138414564 138414688 -61215462 + L2 LINE L2 3145 3272 0 468 241 0 44 chr5 138414762 138414899 -61215251 + MER117 DNA MER1_type 4 134 -63 1397 215 58 13 chr5 138415713 138416207 -61213943 + L1ME2 LINE L1 5089 5603 -563 * 4448 167 24 38 chr5 138416206 138416736 -61213414 + L1MB7 LINE L1 5092 5628 -556 1614 175 57 73 chr5 138416736 138417175 -61212975 - MSTB1 LTR MaLR 0 432 1 4448 167 24 38 chr5 138417175 138417737 -61212413 + L1MB7 LINE L1 5628 6170 -14 1391 239 38 34 chr5 138417747 138418216 -61211934 + L1ME2 LINE L1 5612 6082 -82 1408 175 19 9 chr5 138418218 138418519 -61211631 + MER61C LTR ERV1 1 398 -29 334 198 0 22 chr5 138418519 138418610 -61211540 + L1MA9 LINE L1 6218 6306 -6 236 395 7 20 chr5 138420286 138420433 -61209717 - MIR SINE MIR -98 164 20 2698 105 19 5 chr5 138420603 138421022 -61209128 - MER57B LTR ERV1 -9 425 1 2352 116 0 0 chr5 138421586 138421897 -61208253 + AluSx SINE Alu 1 311 -1 785 301 10 5 chr5 138421934 138422140 -61208010 - MIR SINE MIR -36 226 20 237 247 22 135 chr5 138422934 138423023 -61207127 - L2 LINE L2 -8 3305 3227 21 0 0 0 chr5 138423078 138423099 -61207051 + AT_rich Low_complexity Low_complexity 1 21 0 190 279 90 18 chr5 138423179 138423290 -61206860 - MIR SINE MIR -20 242 124 1962 151 3 10 chr5 138425155 138425460 -61204690 + AluSx SINE Alu 1 303 -9 327 272 12 74 chr5 138426264 138426426 -61203724 + LTR67 LTR ERVL 364 515 -42 298 277 114 54 chr5 138426515 138426681 -61203469 - MIR3 SINE MIR -28 180 5 355 184 23 0 chr5 138427033 138427120 -61203030 + (TA)n Simple_repeat Simple_repeat 2 90 0 1414 50 0 0 chr5 138427127 138427309 -61202841 - L1PA7 LINE L1 -23 6131 5950 239 369 0 0 chr5 138430992 138431076 -61199074 - L2 LINE L2 -8 3264 3181 2049 114 4 0 chr5 138431433 138431713 -61198437 + AluSx SINE Alu 13 293 -19 4241 158 80 16 chr5 138432274 138433170 -61196980 + L1PB1 LINE L1 3 956 -5907 * 13117 183 22 26 chr5 138433168 138434575 -61195575 + L1PB1 LINE L1 1737 3148 -3719 1083 68 0 14 chr5 138434575 138434722 -61195428 + L1PA5 LINE L1 6001 6146 -8 13117 183 22 26 chr5 138434722 138438391 -61191759 + L1PB1 LINE L1 3148 6864 -3 924 225 22 27 chr5 138439146 138439539 -61190611 - MLT1A2 LTR MaLR -6 382 21 449 342 5 21 chr5 138440495 138440682 -61189468 + HAL1 LINE L1 1087 1270 -1237 285 244 0 0 chr5 138440740 138440818 -61189332 + HAL1 LINE L1 2077 2154 -353 388 236 30 109 chr5 138440861 138441026 -61189124 + HAL1b LINE L1 744 895 -453 356 310 92 55 chr5 138441093 138441419 -61188731 + HAL1 LINE L1 2169 2506 -1 703 245 110 5 chr5 138441891 138442091 -61188059 - MER58A DNA MER1_type -3 221 1 58 15 0 0 chr5 138442138 138442203 -61187947 + AT_rich Low_complexity Low_complexity 1 65 0 180 97 0 0 chr5 138443909 138443940 -61186210 + (A)n Simple_repeat Simple_repeat 1 31 0 313 333 50 13 chr5 138444503 138444662 -61185488 + MER5A DNA MER1_type 1 165 -24 7541 28 0 4 chr5 138444761 138445737 -61184413 + L1PA4 LINE L1 5182 6153 -2 380 329 6 24 chr5 138445794 138445958 -61184192 - MLT1H LTR MaLR -270 279 119 818 136 8 8 chr5 138446203 138446335 -61183815 + AluJ SINE Alu 1 132 -170 212 171 0 0 chr5 138446338 138446379 -61183771 + (TA)n Simple_repeat Simple_repeat 2 42 0 238 382 0 38 chr5 138446858 138446989 -61183161 - L2 LINE L2 -204 3068 2943 998 151 16 38 chr5 138447337 138447522 -61182628 + AluJ SINE Alu 128 308 -4 799 247 42 15 chr5 138447537 138447796 -61182354 + L1MC5 LINE L1 5318 5583 -2225 346 230 50 0 chr5 138447846 138447946 -61182204 + L1MC5 LINE L1 7330 7434 -527 659 244 66 20 chr5 138447988 138448291 -61181859 + L1MC5 LINE L1 7609 7925 -36 4702 187 11 8 chr5 138448420 138449478 -61180672 + L1P LINE L1 4271 5331 -815 5865 172 12 16 chr5 138449479 138450632 -61179518 + L1PA15 LINE L1 3503 4652 -1494 2054 136 20 10 chr5 138450632 138450927 -61179223 + AluSx SINE Alu 1 298 -14 5865 172 12 16 chr5 138450927 138450994 -61179156 + L1PA15 LINE L1 4652 4718 -1428 900 243 33 43 chr5 138450994 138451295 -61178855 + pTR5 LTR ERV1 743 1040 -1398 2077 93 131 205 chr5 138451469 138452096 -61178054 + LTR12 LTR ERV1 1 579 -135 7549 106 19 14 chr5 138452096 138453907 -61176243 + HERV9 LTR ERV1 1 1911 -6488 * 23970 87 18 10 chr5 138453890 138459466 -61170684 + HERV9 LTR ERV1 504 8399 0 4597 103 85 70 chr5 138459654 138460466 -61169684 + LTR12 LTR ERV1 3 826 0 6297 84 21 1 chr5 138460466 138461881 -61168269 + L1PA14 LINE L1 4715 6161 0 4882 132 20 5 chr5 138461896 138462732 -61167418 + L1PA15 LINE L1 5317 6165 0 1367 80 10 0 chr5 138463241 138463442 -61166708 + L1PA14 LINE L1 5817 6019 -142 468 89 65 0 chr5 138463441 138463528 -61166622 - L1M1 LINE L1 -605 5556 5468 * 216 343 55 0 chr5 138464008 138464081 -61166069 - L2 LINE L2 -3 3310 3234 1000 208 82 68 chr5 138466206 138466500 -61163650 + AluJo SINE Alu 2 299 -3 2160 96 48 3 chr5 138466892 138467184 -61162966 + AluSq SINE Alu 1 305 -8 347 305 238 0 chr5 138467478 138467642 -61162508 - L3 LINE CR1 -40 1537 1335 242 200 153 0 chr5 138467635 138467720 -61162430 - L2 LINE L2 -99 3214 3117 * 180 263 0 0 chr5 138467837 138467875 -61162275 + L2 LINE L2 3215 3252 -20 22 0 0 0 chr5 138470696 138470718 -61159432 + AT_rich Low_complexity Low_complexity 1 22 0 204 314 153 8 chr5 138472857 138472975 -61157175 + L2 LINE L2 3138 3272 0 23 0 0 0 chr5 138473608 138473631 -61156519 + AT_rich Low_complexity Low_complexity 1 23 0 22 88 0 0 chr5 138474834 138474891 -61155259 + AT_rich Low_complexity Low_complexity 1 57 0 326 261 55 0 chr5 138474979 138475131 -61155019 + L1MC/D LINE L1 5678 5840 -281 2145 116 65 8 chr5 138475962 138476316 -61153834 - THE1C LTR MaLR -1 374 1 2248 99 0 3 chr5 138476335 138476629 -61153521 - AluSq SINE Alu -18 295 3 13613 60 8 0 chr5 138476749 138478541 -61151609 - L1P LINE L1 -2014 4132 2326 1862 80 16 0 chr5 138478541 138478790 -61151360 + L1PA6 LINE L1 5900 6154 0 228 303 73 18 chr5 138479366 138479475 -61150675 - MER5A DNA MER1_type -3 186 72 976 211 85 53 chr5 138480571 138480639 -61149511 - MLT1C LTR MaLR 0 467 403 2279 57 0 11 chr5 138480639 138480950 -61149200 + AluY SINE Alu 3 310 0 976 211 85 53 chr5 138480950 138481198 -61148952 - MLT1C LTR MaLR -64 403 140 1586 164 122 3 chr5 138481204 138481516 -61148634 + MER93b LTR ERV1 10 358 -15 661 181 29 14 chr5 138481526 138481664 -61148486 - MLT1C LTR MaLR -324 143 4 196 382 29 0 chr5 138483125 138483227 -61146923 + MIR SINE MIR 33 137 -71 23 54 0 0 chr5 138483263 138483300 -61146850 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 138483351 138483372 -61146778 + AT_rich Low_complexity Low_complexity 1 21 0 590 277 141 5 chr5 138484199 138484405 -61145745 - MIR SINE MIR -1 261 28 23 86 0 0 chr5 138484657 138484715 -61145435 + AT_rich Low_complexity Low_complexity 1 58 0 2342 104 0 0 chr5 138484802 138485109 -61145041 - AluSx SINE Alu -5 307 1 3913 112 22 2 chr5 138485177 138485621 -61144529 + LTR43 LTR ERV1 1 461 -141 204 40 0 0 chr5 138485621 138485646 -61144504 + (TG)n Simple_repeat Simple_repeat 2 26 0 3913 112 22 2 chr5 138485646 138485791 -61144359 + LTR43 LTR ERV1 461 602 0 1971 179 16 11 chr5 138485816 138486179 -61143971 - MLT1A1 LTR MaLR 0 365 1 745 184 108 0 chr5 138487001 138487186 -61142964 - LTR37A LTR ERV1 0 426 222 12082 181 53 87 chr5 138487216 138488901 -61141249 + L1MB4 LINE L1 819 2560 -4288 1466 162 90 23 chr5 138488901 138488999 -61141151 + AluSx SINE Alu 6 96 -216 2032 103 67 25 chr5 138488999 138489359 -61140791 + THE1C LTR MaLR 1 375 0 1466 162 90 23 chr5 138489359 138489526 -61140624 + AluSx SINE Alu 96 289 -23 12082 181 53 87 chr5 138489526 138492807 -61137343 + L1MB4 LINE L1 2560 5621 -1227 2147 130 0 7 chr5 138492807 138493115 -61137035 + AluSg SINE Alu 1 306 -4 12082 181 53 87 chr5 138493115 138493534 -61136616 + L1MB4 LINE L1 5621 6053 -795 306 283 86 27 chr5 138493586 138493764 -61136386 - MIR SINE MIR -65 143 9 21 36 0 0 chr5 138495176 138495204 -61134946 + AT_rich Low_complexity Low_complexity 1 28 0 396 59 0 0 chr5 138495204 138495255 -61134895 + (CA)n Simple_repeat Simple_repeat 2 52 0 893 267 125 72 chr5 138495630 138496550 -61133600 + MER52A LTR ERV1 663 1751 -4 2240 92 20 0 chr5 138498442 138498737 -61131413 + AluSp SINE Alu 1 301 -12 3498 130 28 2 chr5 138498932 138499472 -61130678 - MER41A LTR ERV1 0 554 1 183 218 0 91 chr5 138499746 138499801 -61130349 + L2 LINE L2 3205 3254 -18 1505 206 25 76 chr5 138500580 138500701 -61129449 + L1MB4 LINE L1 6455 6581 -301 1838 170 0 0 chr5 138500701 138501024 -61129126 + AluSx SINE Alu 1 323 0 1505 206 25 76 chr5 138501024 138501334 -61128816 + L1MB4 LINE L1 6581 6865 -17 247 208 69 0 chr5 138501344 138501445 -61128705 + (TA)n Simple_repeat Simple_repeat 1 108 0 435 152 0 0 chr5 138503288 138503367 -61126783 + (CATATA)n Simple_repeat Simple_repeat 4 82 0 1748 34 0 0 chr5 138503421 138503628 -61126522 - L1PA5 LINE L1 -21 6133 5927 1560 33 0 0 chr5 138503625 138503808 -61126342 + L1PA5 LINE L1 5715 5897 -257 * 348 265 129 8 chr5 138503808 138503940 -61126210 - MIR SINE MIR -100 162 15 1617 159 29 14 chr5 138504005 138504306 -61125844 - AluJb SINE Alu 0 305 1 6201 68 60 0 chr5 138506135 138507168 -61122982 - L1PA7 LINE L1 -11 6143 5086 870 173 0 37 chr5 138509049 138509211 -61120939 - FRAM SINE Alu -23 153 1 486 318 66 0 chr5 138509244 138509455 -61120695 - MIR SINE MIR -36 226 2 750 231 5 70 chr5 138510052 138510161 -61119989 - MER45A DNA AcHobo -1406 175 81 1822 184 27 19 chr5 138510161 138510530 -61119620 - THE1C LTR MaLR -2 373 2 750 231 5 70 chr5 138510530 138510606 -61119544 - MER45A DNA AcHobo -1500 81 2 297 272 183 41 chr5 138512475 138512644 -61117506 + MIR3 SINE MIR 7 199 -9 198 0 0 0 chr5 138513092 138513114 -61117036 + (A)n Simple_repeat Simple_repeat 1 22 0 2324 58 3 3 chr5 138513114 138513407 -61116743 + AluY SINE Alu 1 293 -18 496 296 53 29 chr5 138513407 138513613 -61116537 - MLT1K LTR MaLR -53 535 325 204 291 239 8 chr5 138513927 138514061 -61116089 + MIR3 SINE MIR 40 204 -4 1601 283 40 12 chr5 138516383 138516980 -61113170 + L1ME1 LINE L1 3230 3843 -2303 1330 228 199 40 chr5 138516976 138517303 -61112847 + L1ME1 LINE L1 5473 5747 -419 * 936 207 14 36 chr5 138517303 138517525 -61112625 - MER20 DNA MER1_type 0 219 3 1330 228 199 40 chr5 138517525 138517780 -61112370 + L1ME1 LINE L1 5747 6148 -18 2505 59 0 0 chr5 138517872 138518177 -61111973 + AluY SINE Alu 1 305 -6 3335 226 49 19 chr5 138518331 138519594 -61110556 + L1MB7 LINE L1 2088 3393 -2989 1361 237 66 0 chr5 138519602 138519982 -61110168 + L1MB7 LINE L1 3800 4204 -2178 2452 218 64 6 chr5 138519986 138520536 -61109614 + L1MB7 LINE L1 4393 4994 -1388 195 42 0 0 chr5 138520536 138520560 -61109590 + (CAGTA)n Simple_repeat Simple_repeat 4 27 0 2452 218 64 6 chr5 138520560 138520712 -61109438 + L1MB7 LINE L1 4994 5136 -1246 2309 171 63 11 chr5 138520698 138521160 -61108990 + L1MB7 LINE L1 5650 6135 -285 * 986 168 73 27 chr5 138521162 138521382 -61108768 + L1MB7 LINE L1 6191 6420 0 337 314 0 0 chr5 138521977 138522082 -61108068 - Charlie8 DNA MER1_type -2189 228 124 29585 60 9 2 chr5 138522162 138526866 -61103284 + L1PA4 LINE L1 1427 6154 -1 528 193 23 0 chr5 138526890 138526978 -61103172 - MER58A DNA MER1_type -16 91 2 925 265 26 13 chr5 138526979 138527288 -61102862 + L1MCc LINE L1 36 348 -6075 971 288 147 20 chr5 138527425 138527964 -61102186 + L1MCc LINE L1 836 1442 -4981 25 0 0 0 chr5 138528213 138528238 -61101912 + AT_rich Low_complexity Low_complexity 1 25 0 1311 221 164 14 chr5 138528462 138529022 -61101128 + MER114 LTR ERV 1 644 -4 195 42 0 0 chr5 138529187 138529211 -61100939 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1296 218 83 79 chr5 138529518 138529744 -61100406 - L1ME3A LINE L1 -7 6163 5939 1320 111 69 9 chr5 138529744 138529961 -61100189 + MER30 DNA MER1_type 1 230 0 1296 218 83 79 chr5 138529961 138530253 -61099897 - L1ME3A LINE L1 -231 5939 5643 23 0 0 0 chr5 138530425 138530448 -61099702 + AT_rich Low_complexity Low_complexity 1 23 0 805 145 16 8 chr5 138531657 138531781 -61098369 + AluJo SINE Alu 11 135 -177 2560 56 0 3 chr5 138531932 138532238 -61097912 - AluY SINE Alu -6 305 1 1447 205 3 34 chr5 138532245 138532543 -61097607 - AluJo SINE Alu -13 289 1 23 0 0 0 chr5 138532956 138532979 -61097171 + AT_rich Low_complexity Low_complexity 1 23 0 8919 135 22 6 chr5 138533674 138536007 -61094143 + L1PA10 LINE L1 3786 6165 -3 212 298 111 40 chr5 138536222 138536420 -61093730 + L2 LINE L2 2816 3027 -245 11580 160 49 8 chr5 138536572 138539928 -61090222 + L1MA2 LINE L1 2808 6304 0 325 219 161 44 chr5 138539931 138540068 -61090082 - MIR SINE MIR 0 262 110 433 222 33 0 chr5 138540091 138540181 -61089969 + MER81 DNA DNA 4 96 -18 2269 159 79 25 chr5 138540388 138540867 -61089283 + LTR22 LTR ERVK 1 505 -4 458 220 187 0 chr5 138541403 138541553 -61088597 + MER5B DNA MER1_type 1 178 0 640 218 58 37 chr5 138541699 138541887 -61088263 + L1 LINE L1 4884 5075 -1071 4045 110 10 11 chr5 138543733 138544344 -61085806 - MER4B LTR ERV1 0 610 1 571 303 66 41 chr5 138544885 138545129 -61085021 - MIR SINE MIR 0 262 13 21 0 0 0 chr5 138545866 138545887 -61084263 + AT_rich Low_complexity Low_complexity 1 21 0 279 261 84 50 chr5 138546066 138546185 -61083965 - L2 LINE L2 -4 3309 3187 356 310 30 5 chr5 138547749 138547898 -61082252 + MIR SINE MIR 15 170 -69 243 232 0 0 chr5 138547913 138547969 -61082181 + L1ME3 LINE L1 5957 6012 -150 5344 102 33 1 chr5 138550265 138552041 -61078109 - L1PA14 LINE L1 -2 6159 4309 2121 118 0 3 chr5 138553843 138554130 -61076020 - AluSg SINE Alu -19 291 6 706 246 69 0 chr5 138556025 138556200 -61073950 - MLT1F1 LTR MaLR -369 198 12 291 193 97 40 chr5 138556254 138556430 -61073720 - Charlie7 DNA MER1_type 0 2612 2427 * 361 247 41 0 chr5 138556420 138556517 -61073633 - Charlie7 DNA MER1_type -2511 101 1 1799 269 77 11 chr5 138556795 138557461 -61072689 + L1MC4a LINE L1 5284 5993 -1815 321 295 28 0 chr5 138557657 138557779 -61072371 - MIR SINE MIR -37 171 42 384 204 263 32 chr5 138559773 138559959 -61070191 + MIR SINE MIR 29 257 -5 418 194 18 60 chr5 138561276 138561405 -61068745 + L1MA7 LINE L1 5979 6094 -197 380 294 119 28 chr5 138561424 138561601 -61068549 + MIR SINE MIR 24 216 -46 901 169 69 26 chr5 138561612 138561801 -61068349 + L1PB4 LINE L1 5959 6155 -1 409 100 81 214 chr5 138561806 138561930 -61068220 + L1MA7 LINE L1 6106 6192 -99 1885 147 10 3 chr5 138561930 138562223 -61067927 - AluSx SINE Alu -7 305 11 409 100 81 214 chr5 138562223 138562308 -61067842 + L1MA7 LINE L1 6192 6287 -4 1908 136 0 0 chr5 138563485 138563742 -61066408 + AluSg SINE Alu 1 257 -53 23 0 0 0 chr5 138565032 138565055 -61065095 + AT_rich Low_complexity Low_complexity 1 23 0 243 188 0 0 chr5 138567230 138567278 -61062872 + A-rich Low_complexity Low_complexity 1 48 0 1627 191 39 17 chr5 138567847 138568202 -61061948 + MLT1A1 LTR MaLR 1 363 -2 774 190 163 33 chr5 138568308 138568492 -61061658 + MER3 DNA MER1_type 2 209 0 240 242 211 47 chr5 138568728 138568856 -61061294 + MIR3 SINE MIR 41 189 -19 404 253 53 0 chr5 138568902 138568997 -61061153 - MER102b DNA MER1_type 0 341 242 1170 218 107 0 chr5 138570419 138570727 -61059423 - MLT1A1 LTR MaLR -24 341 1 25 65 0 0 chr5 138571073 138571119 -61059031 + AT_rich Low_complexity Low_complexity 1 46 0 457 280 59 38 chr5 138571604 138571840 -61058310 + L1ME LINE L1 5571 5811 -310 777 281 19 5 chr5 138573751 138573961 -61056189 + MIR SINE MIR 18 230 -32 1921 123 14 7 chr5 138574445 138574721 -61055429 + AluSx SINE Alu 1 278 -34 294 50 0 0 chr5 138574732 138574772 -61055378 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 26 30 0 0 chr5 138576730 138576763 -61053387 + AT_rich Low_complexity Low_complexity 1 33 0 191 273 91 36 chr5 138576979 138577089 -61053061 - L3b LINE CR1 -343 1240 1125 1865 158 11 0 chr5 138577182 138577467 -61052683 - AluSx SINE Alu -24 288 1 233 399 65 8 chr5 138577789 138578003 -61052147 + L2 LINE L2 2607 2850 -464 1822 162 0 0 chr5 138578003 138578274 -61051876 - AluJb SINE Alu -33 279 9 233 399 65 8 chr5 138578274 138578410 -61051740 + L2 LINE L2 2850 2977 -337 850 240 96 10 chr5 138579689 138580001 -61050149 - L1ME3A LINE L1 -34 6136 5798 605 130 0 0 chr5 138580192 138580292 -61049858 + L1MA7 LINE L1 6180 6279 -12 2508 48 10 0 chr5 138580621 138580914 -61049236 + AluY SINE Alu 1 296 -15 592 263 54 24 chr5 138581605 138581847 -61048303 + MLT1H LTR MaLR 11 302 -247 1054 161 179 62 chr5 138581870 138582223 -61047927 - MSTD LTR MaLR 0 396 3 326 210 212 0 chr5 138582273 138582380 -61047770 + MLT1G1 LTR MaLR 423 594 -1 1095 246 106 10 chr5 138583325 138583492 -61046658 + L1MC4a LINE L1 7282 7432 -376 207 0 0 0 chr5 138583492 138583515 -61046635 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1095 246 106 10 chr5 138583515 138583734 -61046416 + L1MC4a LINE L1 7432 7705 -103 433 239 99 49 chr5 138584155 138584297 -61045853 + MER5A DNA MER1_type 39 187 -2 877 185 182 76 chr5 138585096 138585426 -61044724 - MLT1A1 LTR MaLR 0 365 1 976 311 181 24 chr5 138585431 138586223 -61043927 - L2 LINE L2 -13 3300 2315 2103 155 23 0 chr5 138586223 138586577 -61043573 - THE1B LTR MaLR -2 362 1 976 311 181 24 chr5 138586577 138586795 -61043355 - L2 LINE L2 -998 2315 2132 911 149 7 0 chr5 138586847 138586988 -61043162 - FRAM SINE Alu -6 170 29 258 293 113 0 chr5 138587029 138587135 -61043015 + MIR SINE MIR 131 248 -14 359 265 12 0 chr5 138587470 138587553 -61042597 - MIR3 SINE MIR -48 160 77 195 292 58 58 chr5 138588132 138588252 -61041898 - MIR SINE MIR -107 155 36 801 267 205 33 chr5 138588732 138589162 -61040988 - MLT1H LTR MaLR -5 544 41 1884 134 95 0 chr5 138589242 138589525 -61040625 + AluSx SINE Alu 1 310 -2 349 333 68 55 chr5 138591623 138591842 -61038308 + MIR SINE MIR 28 249 -13 238 271 82 0 chr5 138592123 138592208 -61037942 + MIR SINE MIR 74 165 -97 3877 163 64 46 chr5 138592920 138594258 -61035892 + L1MB7 LINE L1 4820 6184 0 578 282 92 0 chr5 138594328 138594523 -61035627 - MIR SINE MIR -10 252 40 180 234 191 0 chr5 138594877 138594924 -61035226 + MIR SINE MIR 37 92 -116 406 192 16 26 chr5 138595401 138595540 -61034610 + L1MB3 LINE L1 6018 6162 -21 654 262 64 25 chr5 138595799 138596001 -61034149 - MER63A DNA MER1_type 0 210 1 448 316 107 14 chr5 138596748 138596963 -61033187 - MIR SINE MIR -13 249 15 2392 90 0 7 chr5 138597098 138597408 -61032742 - AluSx SINE Alu -4 308 1 438 127 0 0 chr5 138597684 138597755 -61032395 + (GGA)n Simple_repeat Simple_repeat 1 71 0 222 37 0 0 chr5 138597994 138598021 -61032129 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 2250 54 0 0 chr5 138598026 138598302 -61031848 - AluY SINE Alu -35 276 1 25 51 0 0 chr5 138598361 138598400 -61031750 + AT_rich Low_complexity Low_complexity 1 39 0 333 0 0 0 chr5 138599522 138599559 -61030591 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 357 253 13 0 chr5 138600351 138600430 -61029720 + MER81 DNA DNA 1 80 -34 32 0 0 0 chr5 138602191 138602223 -61027927 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 138602992 138603015 -61027135 + AT_rich Low_complexity Low_complexity 1 23 0 217 258 0 53 chr5 138603148 138603299 -61026851 + (TTAAA)n Simple_repeat Simple_repeat 3 145 0 653 291 112 23 chr5 138603735 138604256 -61025894 - L2 LINE L2 -2 3311 2685 370 274 143 26 chr5 138604264 138604628 -61025522 - L1MC/D LINE L1 -507 5657 5341 367 327 103 18 chr5 138604787 138605068 -61025082 - L1MC/D LINE L1 -982 5164 4860 1045 289 99 22 chr5 138605073 138605620 -61024530 - L1MC/D LINE L1 -1376 4770 4160 2428 66 0 7 chr5 138605620 138605921 -61024229 - AluY SINE Alu -12 299 1 1045 289 99 22 chr5 138605921 138606048 -61024102 - L1MC/D LINE L1 -1986 4160 4044 3524 224 57 51 chr5 138607596 138608803 -61021347 + MER69B DNA AcHobo 10 1223 -3 7719 155 4 1 chr5 138609161 138611652 -61018498 - L1PB1 LINE L1 0 6867 4367 10015 103 53 6 chr5 138611655 138613374 -61016776 - L1PB1 LINE L1 -3714 3148 1349 348 267 20 0 chr5 138613944 138614045 -61016105 + MARNA DNA Mariner 248 350 -236 206 273 114 34 chr5 138615198 138615286 -61014864 + L2 LINE L2 3178 3272 0 561 234 7 14 chr5 138616636 138616781 -61013369 - MLT1F1 LTR MaLR -3 564 421 285 189 14 14 chr5 138616776 138616850 -61013300 - MLT1F LTR MaLR -468 74 1 * 493 318 52 23 chr5 138616892 138617065 -61013085 + MIR SINE MIR 20 197 -65 21 0 0 0 chr5 138617433 138617454 -61012696 + AT_rich Low_complexity Low_complexity 1 21 0 195 146 0 0 chr5 138617793 138617834 -61012316 + (TA)n Simple_repeat Simple_repeat 2 42 0 507 263 44 6 chr5 138618144 138618304 -61011846 + MER69A DNA AcHobo 10 175 -2 1973 173 0 0 chr5 138618341 138618641 -61011509 + AluJb SINE Alu 1 300 -12 741 198 6 0 chr5 138619112 138619269 -61010881 + L1PB4 LINE L1 5999 6156 0 622 244 176 14 chr5 138619325 138619546 -61010604 + MIR SINE MIR 3 259 -3 2232 126 0 0 chr5 138619917 138620210 -61009940 + AluSx SINE Alu 2 294 -18 562 277 115 13 chr5 138620988 138621223 -61008927 - MIR SINE MIR -1 261 3 1591 102 93 0 chr5 138621366 138621591 -61008559 + AluSx SINE Alu 58 303 -9 2031 170 103 19 chr5 138621701 138622184 -61007966 + L1MB7 LINE L1 5656 6179 -5 1153 241 55 23 chr5 138622455 138622850 -61007300 - MER68 LTR ERV1 -11 551 144 370 127 0 0 chr5 138622850 138622905 -61007245 - MER1B DNA MER1_type -1 328 274 1034 107 0 51 chr5 138622970 138623148 -61007002 - MER1B DNA MER1_type -59 280 112 282 287 172 86 chr5 138624133 138624243 -61005907 + L3 LINE CR1 1083 1182 -395 2309 78 0 3 chr5 138624243 138624549 -61005601 + AluY SINE Alu 1 305 -6 282 287 172 86 chr5 138624549 138624786 -61005364 + L3 LINE CR1 1182 1460 -117 220 304 14 14 chr5 138624903 138624972 -61005178 - L2 LINE L2 -57 3256 3188 1202 113 9 28 chr5 138626049 138626262 -61003888 - L1MA9 LINE L1 -3 6309 6101 995 105 26 0 chr5 138626262 138626415 -61003735 - L1MA9 LINE L1 -771 5541 5385 6392 76 31 39 chr5 138626419 138627406 -61002744 - L1PA13 LINE L1 -1 6162 5177 6848 232 39 44 chr5 138627406 138627470 -61002680 - L1 LINE L1 -2079 5486 5423 1691 201 3 0 chr5 138627470 138627774 -61002376 - AluJb SINE Alu -7 305 1 6848 232 39 44 chr5 138627774 138628269 -61001881 - L1 LINE L1 -2142 5423 4927 1482 180 12 0 chr5 138628269 138628525 -61001625 - AluJo SINE Alu -7 305 47 6848 232 39 44 chr5 138628525 138629547 -61000603 - L1 LINE L1 -2638 4927 3901 1645 171 147 24 chr5 138629547 138629928 -61000222 + MSTA LTR MaLR 1 428 0 6848 232 39 44 chr5 138629928 138631939 -60998211 - L1 LINE L1 -3664 3901 2017 1013 226 121 16 chr5 138632828 138633134 -60997016 + MER46C DNA MER2_type 1 338 0 572 278 191 14 chr5 138635171 138635380 -60994770 - MIR SINE MIR -3 259 14 194 313 16 16 chr5 138635581 138635645 -60994505 - L3 LINE CR1 -1409 168 105 * 460 268 152 16 chr5 138635616 138635831 -60994319 + MIR SINE MIR 9 252 -10 1014 39 0 0 chr5 138636538 138636667 -60993483 + L1PA4 LINE L1 6027 6155 0 659 214 70 27 chr5 138636676 138636863 -60993287 - L1ME3 LINE L1 -6 6156 5962 446 209 48 9 chr5 138637581 138637686 -60992464 + MER94 DNA DNA 26 134 0 242 253 20 61 chr5 138638110 138638209 -60991941 - MIR SINE MIR -2 260 166 3560 108 23 7 chr5 138638244 138638810 -60991340 - L1PA16 LINE L1 0 6166 5592 535 257 21 21 chr5 138638848 138638988 -60991162 + MLT1H1 LTR MaLR 49 188 -367 9911 28 0 0 chr5 138638988 138640930 -60989220 - L1PA3 LINE L1 -1 6154 4211 12747 202 19 11 chr5 138640930 138642140 -60988010 - L1P4 LINE L1 -552 5614 4416 219 36 0 0 chr5 138642140 138642168 -60987982 + (TG)n Simple_repeat Simple_repeat 2 29 0 12747 202 19 11 chr5 138642168 138644139 -60986011 - L1P4 LINE L1 -1750 4416 2406 343 273 125 64 chr5 138644142 138644305 -60985845 - MIR SINE MIR -63 145 7 1663 174 3 34 chr5 138644774 138645067 -60985083 - AluJo SINE Alu -28 284 1 237 150 0 0 chr5 138645386 138645426 -60984724 - MIR SINE MIR -138 70 31 333 395 33 13 chr5 138645652 138645804 -60984346 + L2 LINE L2 3117 3271 -1 201 175 0 0 chr5 138645807 138645847 -60984303 + GA-rich Low_complexity Low_complexity 4 43 0 470 259 82 34 chr5 138646750 138646897 -60983253 - L2 LINE L2 0 3313 3160 983 270 60 50 chr5 138646900 138647337 -60982813 + L2 LINE L2 2827 3267 -46 1053 239 67 118 chr5 138647413 138647982 -60982168 + MLT1H1 LTR MaLR 1 553 -2 327 337 88 34 chr5 138648816 138649021 -60981129 - L3b LINE CR1 -19 1564 1349 2073 101 104 70 chr5 138649419 138649833 -60980317 - MSTA LTR MaLR 0 428 1 2505 84 0 0 chr5 138650074 138650383 -60979767 + AluSg SINE Alu 2 310 0 3105 158 17 17 chr5 138650974 138651568 -60978582 + L1MB4 LINE L1 5584 6177 -3 504 280 83 51 chr5 138653221 138653596 -60976554 + HAL1 LINE L1 1406 1792 -715 25 83 0 0 chr5 138654338 138654398 -60975752 + AT_rich Low_complexity Low_complexity 1 60 0 381 275 73 81 chr5 138654735 138654850 -60975300 + LTR16C LTR ERVL 247 361 -130 2220 106 0 10 chr5 138654850 138655161 -60974989 - AluSp SINE Alu -5 308 1 381 275 73 81 chr5 138655161 138655292 -60974858 + LTR16C LTR ERVL 361 491 0 327 336 8 23 chr5 138655790 138655918 -60974232 + MIR3 SINE MIR 14 139 -69 296 286 95 17 chr5 138706981 138707275 -60922875 + L1M4 LINE L1 2841 3157 -2989 4203 189 6 0 chr5 138707439 138708321 -60921829 - L1 LINE L1 -3169 3693 2806 * 4630 208 23 0 chr5 138708319 138709350 -60920800 + L1 LINE L1 3699 4753 -2109 1802 173 91 12 chr5 138709397 138709738 -60920412 + MSTA LTR MaLR 1 368 -60 28 48 0 0 chr5 138709738 138709780 -60920370 + AT_rich Low_complexity Low_complexity 1 42 0 2909 174 22 2 chr5 138709936 138710446 -60919704 + MLT2B1 LTR ERVL 1 520 0 756 273 79 18 chr5 138710637 138710915 -60919235 + L2 LINE L2 1866 2160 -1154 500 301 27 90 chr5 138710956 138711321 -60918829 + L2 LINE L2 2968 3309 -4 24 0 0 0 chr5 138712032 138712056 -60918094 + AT_rich Low_complexity Low_complexity 1 24 0 529 346 48 11 chr5 138712230 138712583 -60917567 - L1MC4a LINE L1 -1880 5928 5563 326 264 174 52 chr5 138712996 138713208 -60916942 - L1MC4a LINE L1 -1795 6013 5776 388 328 78 2 chr5 138714485 138714670 -60915480 + MIR SINE MIR 3 199 -63 386 376 0 8 chr5 138714803 138714928 -60915222 - L2 LINE L2 -8 3264 3141 291 109 14 44 chr5 138714940 138715011 -60915139 + L1MA5 LINE L1 6230 6301 -2 21 0 0 0 chr5 138716329 138716350 -60913800 + AT_rich Low_complexity Low_complexity 1 21 0 2655 241 27 76 chr5 138717533 138718746 -60911404 - L1M4 LINE L1 -2540 3606 2453 22 56 0 0 chr5 138719692 138719728 -60910422 + AT_rich Low_complexity Low_complexity 1 36 0 1995 203 26 11 chr5 138720105 138720569 -60909581 - Charlie1 DNA MER1_type -194 2567 2097 372 186 35 0 chr5 138720898 138720984 -60909166 - L1MB3 LINE L1 -8 6175 6087 3987 157 63 6 chr5 138720987 138721713 -60908437 - L1MA4 LINE L1 -279 6021 5254 2039 141 120 5 chr5 138721728 138722112 -60908038 - MSTA LTR MaLR 0 428 1 708 92 9 9 chr5 138722112 138722221 -60907929 - MSTA-int LTR MaLR 0 1651 1543 1903 182 5 3 chr5 138722223 138722602 -60907548 - L1MA4 LINE L1 -1832 4314 3935 6326 138 9 10 chr5 138723209 138723522 -60906628 - L1MC1 LINE L1 -9 6324 6012 3495 101 20 10 chr5 138723522 138724028 -60906122 - MER9 LTR ERVK 0 511 1 6326 138 9 10 chr5 138724028 138724731 -60905419 - L1MC1 LINE L1 -321 6012 5309 26 30 0 0 chr5 138724736 138724769 -60905381 + AT_rich Low_complexity Low_complexity 1 33 0 27 29 0 0 chr5 138724873 138724907 -60905243 + AT_rich Low_complexity Low_complexity 1 34 0 249 97 0 65 chr5 138725928 138725990 -60904160 + (GGAGAA)n Simple_repeat Simple_repeat 6 63 0 254 182 111 40 chr5 138726454 138726553 -60903597 + MER104 DNA Tc2 14 119 -61 225 65 0 0 chr5 138728750 138728781 -60901369 + (TG)n Simple_repeat Simple_repeat 2 32 0 3122 165 8 39 chr5 138729607 138730242 -60899908 - L1 LINE L1 -1889 4257 3643 * 4701 291 71 20 chr5 138730234 138730555 -60899595 - L1ME LINE L1 -1375 4705 4402 2016 205 36 2 chr5 138730555 138730999 -60899151 - LOR1b LTR ERV1 -2 459 1 4701 291 71 20 chr5 138730999 138735131 -60895019 - L1ME LINE L1 -1678 4402 8 579 312 26 30 chr5 138735807 138736076 -60894074 - LOR1b-int LTR ERV1 -138 6511 6244 354 287 30 43 chr5 138736666 138736830 -60893320 - MIR SINE MIR -70 192 31 26 0 0 0 chr5 138736906 138736932 -60893218 + AT_rich Low_complexity Low_complexity 1 26 0 14676 180 48 17 chr5 138738256 138738372 -60891778 + L1MA3 LINE L1 12 123 -7601 2271 108 3 0 chr5 138738372 138738677 -60891473 + AluSq SINE Alu 1 306 -7 14676 180 48 17 chr5 138738677 138740668 -60889482 + L1MA3 LINE L1 123 2051 -5673 237 33 0 0 chr5 138740668 138740698 -60889452 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 14676 180 48 17 chr5 138740698 138745396 -60884754 + L1MA3 LINE L1 2051 7724 0 1261 257 127 36 chr5 138745594 138746170 -60883980 - MER20B DNA MER1_type -46 737 110 306 246 70 43 chr5 138746578 138746697 -60883453 + MIR SINE MIR 48 143 -65 1118 239 55 0 chr5 138747001 138747273 -60882877 + Charlie1b DNA MER1_type 1 287 -236 590 210 40 0 chr5 138747293 138747417 -60882733 + Charlie1b DNA MER1_type 395 523 0 298 315 23 8 chr5 138748625 138748755 -60881395 - MER103 DNA DNA -31 135 4 24 53 0 0 chr5 138753957 138753995 -60876155 + AT_rich Low_complexity Low_complexity 1 38 0 233 297 0 0 chr5 138757419 138757483 -60872667 + CT-rich Low_complexity Low_complexity 1 64 0 554 315 6 22 chr5 138757591 138757772 -60872378 - MER45A DNA AcHobo 0 178 1 198 303 91 23 chr5 138759189 138759321 -60870829 + L3b LINE CR1 1111 1251 -332 3351 116 12 2 chr5 138759808 138760300 -60869850 + LOR1a LTR ERV1 1 497 0 270 216 179 72 chr5 138761140 138761444 -60868706 + MER102b DNA MER1_type 2 313 -28 211 296 127 0 chr5 138761535 138761606 -60868544 + MIR3 SINE MIR 120 199 -9 216 0 0 0 chr5 138761858 138761882 -60868268 + (T)n Simple_repeat Simple_repeat 1 24 0 258 326 68 8 chr5 138764384 138764516 -60865634 - MIR SINE MIR -55 207 68 363 289 29 10 chr5 138764699 138764803 -60865347 + Charlie2 DNA MER1_type 172 277 -2585 2870 162 32 13 chr5 138764975 138765501 -60864649 + MER34B LTR ERV1 1 536 -29 205 207 24 12 chr5 138765519 138765601 -60864549 + (TCTA)n Simple_repeat Simple_repeat 2 84 0 461 254 9 0 chr5 138765649 138765763 -60864387 + Charlie2a DNA MER1_type 1550 1664 -1198 445 333 7 14 chr5 138766056 138766197 -60863953 - LTR16C LTR ERVL -253 238 99 255 286 43 38 chr5 138766447 138766632 -60863518 - MERVL LTR ERVL -161 5324 5139 873 342 47 30 chr5 138766844 138767286 -60862864 - ERVL LTR ERVL -2128 3636 3182 1698 204 67 87 chr5 138767286 138767851 -60862299 + MLT2B3 LTR ERVL 1 554 0 873 342 47 30 chr5 138767851 138767940 -60862210 - ERVL LTR ERVL -2582 3182 3096 313 164 49 0 chr5 138767994 138768055 -60862095 - MLT1E3 LTR MaLR 0 624 561 1081 228 44 54 chr5 138768567 138768883 -60861267 - MLT2C1 LTR ERVL -58 339 27 541 297 9 19 chr5 138769594 138769806 -60860344 - HERVI LTR ERV1 -1111 5538 5329 2270 324 41 35 chr5 138770572 138772444 -60857706 - HERVI LTR ERV1 -2029 5756 2852 34384 36 2 1 chr5 138772589 138778761 -60851389 + L1PA3 LINE L1 1 6155 0 2041 295 56 48 chr5 138778763 138781147 -60849003 - HERVI LTR ERV1 -3973 3812 954 367 307 101 18 chr5 138781800 138782018 -60848132 - HERVI LTR ERV1 -6279 370 135 13610 188 30 22 chr5 138782871 138787954 -60842196 + L1MA3 LINE L1 21 5519 -2205 1513 109 41 0 chr5 138787954 138788175 -60841975 - MER30 DNA MER1_type 0 230 1 13610 188 30 22 chr5 138788175 138790398 -60839752 + L1MA3 LINE L1 5519 7724 0 3743 146 71 6 chr5 138792314 138792978 -60837172 + MER39 LTR ERV1 1 707 0 510 336 111 29 chr5 138794112 138794624 -60835526 + HAL1 LINE L1 437 990 -1517 304 209 47 35 chr5 138795447 138795533 -60834617 - MLT1J LTR MaLR -108 403 317 358 221 71 80 chr5 138795553 138795666 -60834484 - MLT1J LTR MaLR -172 339 228 25 0 0 0 chr5 138796067 138796092 -60834058 + AT_rich Low_complexity Low_complexity 1 25 0 420 320 36 36 chr5 138796124 138796374 -60833776 + L1M4 LINE L1 2141 2390 -3756 353 202 32 64 chr5 138796619 138796713 -60833437 + MLT1J LTR MaLR 244 334 -177 566 298 84 5 chr5 138796738 138796929 -60833221 + MLT1J LTR MaLR 306 511 0 29 47 0 0 chr5 138797148 138797191 -60832959 + AT_rich Low_complexity Low_complexity 1 43 0 1639 162 3 30 chr5 138801036 138801332 -60828818 - AluJo SINE Alu -24 288 1 286 268 136 38 chr5 138801803 138802016 -60828134 - HAL1 LINE L1 -33 2474 2241 2152 173 24 39 chr5 138802204 138802672 -60827478 - MER65C LTR ERV1 0 461 1 2489 291 75 31 chr5 138803263 138803990 -60826160 - L1M4c LINE L1 -3985 2578 1766 2084 109 3 16 chr5 138803990 138804294 -60825856 - AluSg SINE Alu -5 305 6 2489 291 75 31 chr5 138804294 138804872 -60825278 - L1M4c LINE L1 -4797 1766 1215 741 182 54 22 chr5 138804875 138805102 -60825048 - L1M4c LINE L1 -5387 1176 774 24 77 0 0 chr5 138806058 138806110 -60824040 + AT_rich Low_complexity Low_complexity 1 52 0 1184 205 13 23 chr5 138806937 138807220 -60822930 + L1MC2 LINE L1 6043 6324 -20 1650 170 35 0 chr5 138807220 138807508 -60822642 + AluJo SINE Alu 1 298 -14 1184 205 13 23 chr5 138807508 138807527 -60822623 + L1MC2 LINE L1 6324 6342 -2 2040 193 0 10 chr5 138807836 138808230 -60821920 + MLT1B LTR MaLR 1 390 0 253 156 16 16 chr5 138808628 138808692 -60821458 + CT-rich Low_complexity Low_complexity 3 66 0 2690 226 70 19 chr5 138808970 138810167 -60819983 + L1MD1 LINE L1 4353 5618 -624 383 258 24 65 chr5 138810167 138810291 -60819859 - L2 LINE L2 -17 3296 3178 2637 170 116 22 chr5 138811043 138811361 -60818789 + L1MD1 LINE L1 5593 5880 -362 1952 117 0 71 chr5 138811361 138811685 -60818465 - AluSx SINE Alu -11 301 1 2637 170 116 22 chr5 138811685 138811953 -60818197 + L1MD1 LINE L1 5880 6234 -8 709 251 0 0 chr5 138811965 138812128 -60818022 + L1MEc LINE L1 1660 1822 -4574 1801 218 52 14 chr5 138812209 138812935 -60817215 + L1MEc LINE L1 2015 2842 -3373 183 42 0 0 chr5 138813411 138813435 -60816715 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 285 304 89 9 chr5 138813435 138813547 -60816603 - L2 LINE L2 -13 3300 3180 221 360 53 18 chr5 138815686 138815800 -60814350 + L2 LINE L2 2953 3070 -202 275 133 27 27 chr5 138817567 138817642 -60812508 + GA-rich Low_complexity Low_complexity 3 77 0 248 286 0 22 chr5 138818395 138818486 -60811664 + CT-rich Low_complexity Low_complexity 3 91 0 393 22 0 0 chr5 138819253 138819299 -60810851 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 454 210 42 0 chr5 138821174 138821293 -60808857 + MER103 DNA DNA 34 157 -9 27 29 0 0 chr5 138821592 138821626 -60808524 + AT_rich Low_complexity Low_complexity 1 34 0 253 329 200 12 chr5 138821638 138821808 -60808342 + MIR SINE MIR 6 207 -55 248 219 0 27 chr5 138821808 138821881 -60808269 + (CATA)n Simple_repeat Simple_repeat 2 72 0 25 65 0 0 chr5 138821933 138821979 -60808171 + AT_rich Low_complexity Low_complexity 1 46 0 965 254 76 50 chr5 138822073 138822455 -60807695 + LTR16A1 LTR ERVL 1 392 -65 1778 202 115 97 chr5 138823358 138824024 -60806126 + LTR1B LTR ERV1 1 683 -143 7550 27 5 0 chr5 138824024 138825077 -60805073 + L1PA4 LINE L1 5098 6154 -1 1778 202 115 97 chr5 138825077 138825142 -60805008 + LTR1B LTR ERV1 683 745 -81 180 0 0 0 chr5 138825660 138825680 -60804470 + (TGAA)n Simple_repeat Simple_repeat 2 21 0 260 272 43 22 chr5 138825851 138825943 -60804207 - MIR SINE MIR -140 122 29 29 47 0 0 chr5 138826323 138826366 -60803784 + AT_rich Low_complexity Low_complexity 1 43 0 248 184 40 13 chr5 138827812 138827888 -60802262 + (TA)n Simple_repeat Simple_repeat 1 78 0 1130 258 0 4 chr5 138828707 138828959 -60801191 + Charlie1a DNA MER1_type 1 251 -1204 228 361 66 16 chr5 138829573 138829756 -60800394 + L3 LINE CR1 1191 1382 -195 784 257 78 96 chr5 138829783 138830335 -60799815 + MER34 LTR ERV1 1 542 0 1456 101 59 9 chr5 138830422 138830641 -60799509 + MER30 DNA MER1_type 1 230 0 2087 319 61 22 chr5 138831230 138832247 -60797903 + L2 LINE L2 43 1099 -2215 535 345 69 24 chr5 138832237 138832483 -60797667 + L2 LINE L2 2898 3154 -159 * 308 263 25 0 chr5 138834516 138834596 -60795554 - L1ME1 LINE L1 -12 6154 6073 264 174 145 0 chr5 138834670 138834739 -60795411 - AluS SINE Alu -2 299 221 198 0 0 0 chr5 138834854 138834876 -60795274 + (A)n Simple_repeat Simple_repeat 1 22 0 2051 138 71 80 chr5 138834898 138835363 -60794787 + LOR1b LTR ERV1 1 461 0 3233 215 60 26 chr5 138835462 138837350 -60792800 + L1PA7 LINE L1 3906 5903 -251 381 246 29 7 chr5 138837321 138837459 -60792691 + L1M4 LINE L1 2185 2325 -3821 * 759 104 0 9 chr5 138837499 138837614 -60792536 + L1PA7 LINE L1 5910 6023 -131 1622 274 70 28 chr5 138837617 138838259 -60791891 - L1MEc LINE L1 -3461 2619 2005 180 77 0 0 chr5 138838259 138838285 -60791865 + (TCTA)n Simple_repeat Simple_repeat 1 26 0 1622 274 70 28 chr5 138838285 138839305 -60790845 - L1MEc LINE L1 -4075 2005 929 7435 35 3 3 chr5 138839330 138840440 -60789710 - L1PA4 LINE L1 -13 6142 5033 9206 46 1 1 chr5 138840450 138841588 -60788562 + L1PA4 LINE L1 3894 5031 -1115 226 263 40 40 chr5 138841750 138841849 -60788301 - L1MEc LINE L1 -5452 618 520 419 288 92 72 chr5 138842102 138842561 -60787589 - L1MEc LINE L1 -5597 473 6 335 354 74 9 chr5 138843646 138843875 -60786275 + MIR SINE MIR 8 251 -11 272 278 112 47 chr5 138843902 138844071 -60786079 + L2 LINE L2 2977 3156 -157 6262 69 6 3 chr5 138844092 138845715 -60784435 - L1PA7 LINE L1 -6 6148 4490 6763 99 24 0 chr5 138845715 138846688 -60783462 + L1PA7 LINE L1 3481 4476 -1670 440 183 58 29 chr5 138846706 138846810 -60783340 + L2 LINE L2 3182 3288 -25 195 42 0 0 chr5 138846830 138846854 -60783296 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 263 71 24 0 chr5 138848027 138848069 -60782081 + (TA)n Simple_repeat Simple_repeat 1 43 0 1637 224 78 67 chr5 138849388 138849898 -60780252 - MER77 LTR ERV1 -36 569 54 1313 178 109 17 chr5 138850084 138850426 -60779724 - LTR1B LTR ERV1 -2 783 425 11341 97 4 2 chr5 138850442 138852827 -60777323 - L1PA7 LINE L1 -7 7585 5194 7984 156 23 47 chr5 138852828 138854042 -60776108 - L1PA7 LINE L1 -3979 3605 1610 2244 83 0 20 chr5 138854042 138854343 -60775807 - AluY SINE Alu -16 295 1 7984 156 23 47 chr5 138854343 138854796 -60775354 - L1PA7 LINE L1 -5974 1610 1148 2521 144 5 32 chr5 138854833 138855271 -60774879 - LTR1B LTR ERV1 -387 439 14 246 226 75 0 chr5 138855286 138855339 -60774811 - MIR SINE MIR -65 143 87 219 36 0 0 chr5 138855733 138855761 -60774389 + (T)n Simple_repeat Simple_repeat 1 28 0 250 318 107 23 chr5 138856658 138856816 -60773334 + MIR SINE MIR 63 228 -34 28 48 0 0 chr5 138857582 138857624 -60772526 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr5 138858447 138858482 -60771668 + AT_rich Low_complexity Low_complexity 1 35 0 261 75 0 0 chr5 138859927 138859967 -60770183 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 186 43 0 0 chr5 138860717 138860740 -60769410 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 278 264 28 0 chr5 138861642 138861714 -60768436 + CT-rich Low_complexity Low_complexity 3 76 0 1572 169 38 57 chr5 138861884 138862256 -60767894 + MLT1A1 LTR MaLR 1 365 0 1964 118 54 135 chr5 138864115 138864581 -60765569 - MSTA LTR MaLR 0 428 1 228 35 0 0 chr5 138865555 138865584 -60764566 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 187 330 144 42 chr5 138865649 138865767 -60764383 - L2 LINE L2 -2116 1198 1069 328 277 75 0 chr5 138866092 138866186 -60763964 + MIR SINE MIR 106 206 -56 23 0 0 0 chr5 138866224 138866247 -60763903 + AT_rich Low_complexity Low_complexity 1 23 0 844 234 17 92 chr5 138867973 138868268 -60761882 + MLT2B1 LTR ERVL 228 500 -20 491 68 0 14 chr5 138868268 138868341 -60761809 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 269 118 9 30 chr5 138868341 138868407 -60761743 + MLT2C1 LTR ERVL 352 397 0 240 353 103 7 chr5 138871741 138871877 -60758273 + MIR SINE MIR 53 201 -61 206 201 35 116 chr5 138872111 138872225 -60757925 + MIR SINE MIR 7 113 -95 222 167 0 74 chr5 138872750 138872804 -60757346 + MIR SINE MIR 91 140 -122 360 279 64 52 chr5 138873087 138873259 -60756891 - MIR SINE MIR -85 177 4 296 267 12 0 chr5 138874159 138874245 -60755905 + MLT1I LTR MaLR 80 166 -243 600 331 15 15 chr5 138874703 138874963 -60755187 - MIR SINE MIR -1 261 2 411 301 57 54 chr5 138874968 138875320 -60754830 - L1ME4a LINE L1 -198 5923 5571 211 139 0 23 chr5 138875381 138875424 -60754726 + (TTTTTA)n Simple_repeat Simple_repeat 2 43 0 300 53 0 0 chr5 138876118 138876156 -60753994 + (CA)n Simple_repeat Simple_repeat 2 39 0 229 349 101 58 chr5 138877512 138877839 -60752311 - L2 LINE L2 -9 3263 2923 1937 178 30 54 chr5 138877902 138878305 -60751845 + MER47B DNA MER2_type 1 395 -1928 2389 156 34 10 chr5 138878305 138878721 -60751429 - MSTB LTR MaLR 0 426 1 1937 178 30 54 chr5 138878721 138878745 -60751405 + MER47B DNA MER2_type 395 418 0 334 365 152 29 chr5 138878795 138879118 -60751032 - L2 LINE L2 -536 2778 2496 1303 209 78 17 chr5 138879118 138879462 -60750688 + MLT1A1 LTR MaLR 1 365 0 334 365 152 29 chr5 138879462 138880016 -60750134 - L2 LINE L2 -818 2496 1793 448 346 30 26 chr5 138880310 138880541 -60749609 - MIR SINE MIR -25 237 6 234 156 0 0 chr5 138881064 138881109 -60749041 + (TA)n Simple_repeat Simple_repeat 1 45 0 27 29 0 0 chr5 138883684 138883718 -60746432 + AT_rich Low_complexity Low_complexity 1 34 0 191 99 84 14 chr5 138884301 138884372 -60745778 + (TA)n Simple_repeat Simple_repeat 1 76 0 213 94 0 0 chr5 138886095 138886127 -60744023 + (T)n Simple_repeat Simple_repeat 1 32 0 1959 133 13 3 chr5 138886145 138886446 -60743704 + AluSx SINE Alu 1 304 -8 1380 191 140 3 chr5 138886746 138887103 -60743047 - L1P4 LINE L1 -476 5698 5291 1716 210 59 3 chr5 138887112 138887503 -60742647 - L1M4 LINE L1 -1110 5036 4624 314 304 36 86 chr5 138887519 138887845 -60742305 - L1MEd LINE L1 -1214 1276 866 375 113 0 0 chr5 138888723 138888785 -60741365 + (TG)n Simple_repeat Simple_repeat 1 62 0 804 348 67 36 chr5 138890460 138891012 -60739138 - L2 LINE L2 -348 2966 2398 230 357 12 0 chr5 138891064 138891148 -60739002 - MIR SINE MIR -110 152 68 850 340 14 17 chr5 138891651 138892010 -60738140 + MLT1J LTR MaLR 101 458 -53 22 0 0 0 chr5 138893947 138893969 -60736181 + AT_rich Low_complexity Low_complexity 1 22 0 849 168 0 0 chr5 138894349 138894486 -60735664 - FLAM_C SINE Alu -6 137 1 599 284 211 31 chr5 138896743 138897131 -60733019 + LTR16B LTR ERVL 1 458 -6 214 293 91 40 chr5 138897334 138897433 -60732717 - MIR SINE MIR -111 151 48 247 304 78 20 chr5 138897546 138897648 -60732502 - L2 LINE L2 -39 3274 3167 2390 53 0 0 chr5 138897910 138898193 -60731957 + AluY SINE Alu 1 283 -28 246 22 22 44 chr5 138898197 138898242 -60731908 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 726 194 88 6 chr5 138898486 138898656 -60731494 + LTR47A LTR ERVL 261 444 -8 1673 336 60 68 chr5 138900178 138902908 -60727242 + LTR57-int LTR ERVL 1525 4088 -1255 787 353 69 52 chr5 138903562 138904622 -60725528 + MER4B-int LTR ERV1 5598 6675 -447 541 170 0 57 chr5 138904834 138904940 -60725210 + MER4B-int LTR ERV1 5978 6077 -681 821 134 62 78 chr5 138905205 138905384 -60724766 + LTR47A LTR ERVL 277 452 0 581 278 80 59 chr5 138905385 138905641 -60724509 + L1MC/D LINE L1 4513 4785 -1361 2077 187 6 0 chr5 138905641 138906004 -60724146 - MLT1A1 LTR MaLR 0 365 1 581 278 80 59 chr5 138906004 138906207 -60723943 + L1MC/D LINE L1 4785 4982 -1164 607 310 105 6 chr5 138906587 138906900 -60723250 + L1MC/D LINE L1 5314 5657 -2151 846 316 55 7 chr5 138908011 138908124 -60722026 - L2 LINE L2 -80 3233 3127 3994 138 40 40 chr5 138908124 138908850 -60721300 - LTR8A LTR ERV1 -1 726 1 846 316 55 7 chr5 138908850 138909229 -60720921 - L2 LINE L2 -186 3127 2711 4293 228 120 60 chr5 138909291 138912354 -60717796 + L1MC2 LINE L1 45 3291 -3135 4060 140 2 0 chr5 138912368 138912984 -60717166 - Tigger1 DNA MER2_type 0 2418 1802 4574 192 44 37 chr5 138912984 138913871 -60716279 + L1MC2 LINE L1 5171 6071 -553 1398 124 59 26 chr5 138913871 138914144 -60716006 + L1MA5A LINE L1 6016 6297 0 4574 192 44 37 chr5 138914144 138914693 -60715457 + L1MC2 LINE L1 6071 6615 -9 337 275 154 33 chr5 138914714 138914896 -60715254 - L1ME3A LINE L1 -32 6138 5935 21 71 0 0 chr5 138914950 138914992 -60715158 + AT_rich Low_complexity Low_complexity 1 42 0 474 283 143 22 chr5 138915001 138915033 -60715117 - L2 LINE L2 -606 2708 2681 309 26 0 0 chr5 138915033 138915071 -60715079 + (TG)n Simple_repeat Simple_repeat 1 38 0 474 283 143 22 chr5 138915071 138915268 -60714882 - L2 LINE L2 -633 2681 2451 22 56 0 0 chr5 138915459 138915495 -60714655 + AT_rich Low_complexity Low_complexity 1 36 0 261 0 0 0 chr5 138916230 138916259 -60713891 + (TG)n Simple_repeat Simple_repeat 1 29 0 897 148 58 0 chr5 138918870 138919025 -60711125 + MLT1D LTR MaLR 1 164 -341 1963 202 32 29 chr5 138919055 138919831 -60710319 + MER21B LTR ERV1 27 854 -9 717 266 131 12 chr5 138919852 138920104 -60710046 + MLT1D LTR MaLR 157 438 -67 620 203 8 8 chr5 138920104 138920232 -60709918 - Tigger5 DNA MER2_type 0 2323 2196 219 36 0 0 chr5 138921133 138921161 -60708989 + (CA)n Simple_repeat Simple_repeat 1 28 0 280 281 52 0 chr5 138922798 138922894 -60707256 + MLT1I LTR MaLR 27 127 -282 455 263 8 0 chr5 138923006 138923124 -60707026 + MLT1I LTR MaLR 273 391 -18 453 333 0 0 chr5 138923747 138923876 -60706274 + MER94 DNA DNA 3 131 -3 9270 193 27 25 chr5 138924931 138931396 -60698754 + L1MA5 LINE L1 2 6942 0 347 193 11 0 chr5 138931632 138931720 -60698430 + (CA)n Simple_repeat Simple_repeat 2 90 0 375 301 96 66 chr5 138931727 138932286 -60697864 + L1M4 LINE L1 2240 2825 -3321 530 206 344 9 chr5 138932287 138932505 -60697645 - MLT1E LTR MaLR 0 593 303 2724 156 43 2 chr5 138932639 138933127 -60697023 - L1PA16 LINE L1 -3 6163 5656 251 240 0 0 chr5 138933128 138933178 -60696972 + L1P4 LINE L1 4517 4566 -1580 2044 124 57 28 chr5 138933178 138933532 -60696618 - THE1B LTR MaLR 0 364 1 11461 105 3 4 chr5 138933532 138935113 -60695037 - THE1B-int LTR MaLR 0 1580 1 2063 121 56 31 chr5 138935113 138935468 -60694682 - THE1B LTR MaLR 0 364 1 3187 186 68 29 chr5 138935468 138936508 -60693642 + L1P4 LINE L1 4562 5645 -521 327 154 0 0 chr5 138936548 138936613 -60693537 + (TG)n Simple_repeat Simple_repeat 1 65 0 21 57 0 0 chr5 138936756 138936791 -60693359 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr5 138937257 138937286 -60692864 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr5 138937697 138937730 -60692420 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 138938398 138938428 -60691722 + AT_rich Low_complexity Low_complexity 1 30 0 688 263 66 26 chr5 138938450 138938754 -60691396 - L1M4 LINE L1 -2850 3296 2981 2207 78 34 0 chr5 138938815 138939108 -60691042 - AluSq SINE Alu -10 303 1 22 70 0 0 chr5 138939120 138939163 -60690987 + AT_rich Low_complexity Low_complexity 1 43 0 306 294 11 11 chr5 138939163 138939255 -60690895 - L1M4 LINE L1 -3186 2960 2869 2111 140 31 14 chr5 138939258 138939334 -60690816 - MER46B DNA MER2_type -2498 233 160 1723 190 54 6 chr5 138939334 138939665 -60690485 - MER7A DNA MER2_type -1 345 1 2111 140 31 14 chr5 138939665 138939939 -60690211 - MER46B DNA MER2_type -2571 160 2 1195 224 38 9 chr5 138939946 138940286 -60689864 - L1M4 LINE L1 -3283 2863 2514 427 146 62 0 chr5 138940396 138940526 -60689624 + (TA)n Simple_repeat Simple_repeat 2 139 0 2191 131 0 0 chr5 138941026 138941331 -60688819 + AluSx SINE Alu 1 305 -7 2433 49 0 0 chr5 138942298 138942633 -60687517 - AluY SINE Alu 0 335 1 21 57 0 0 chr5 138943505 138943540 -60686610 + AT_rich Low_complexity Low_complexity 1 35 0 507 302 133 16 chr5 138943657 138943912 -60686238 + L2 LINE L2 3026 3310 -3 207 221 29 73 chr5 138943912 138943980 -60686170 - MIR SINE MIR -197 65 1 237 317 28 106 chr5 138944061 138944203 -60685947 + L2 LINE L2 2943 3073 -199 244 225 108 36 chr5 138944644 138944755 -60685395 - MLT1L LTR MaLR -4 611 493 445 245 33 26 chr5 138944878 138945029 -60685121 - MLT1L LTR MaLR -309 306 155 501 17 0 0 chr5 138946473 138946531 -60683619 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 37 0 0 0 chr5 138947962 138947999 -60682151 + AT_rich Low_complexity Low_complexity 1 37 0 446 295 61 46 chr5 138948043 138948276 -60681874 + L1MC/D LINE L1 2932 3173 -2973 2050 141 0 0 chr5 138948276 138948575 -60681575 + AluSx SINE Alu 1 299 -13 446 295 61 46 chr5 138948575 138948687 -60681463 + L1MC/D LINE L1 3173 3282 -2864 439 314 151 48 chr5 138948754 138949111 -60681039 + MLT1J LTR MaLR 44 437 -74 317 330 7 32 chr5 138949400 138949540 -60680610 + MLT1I LTR MaLR 81 204 -205 473 289 243 0 chr5 138949696 138949848 -60680302 + MER5A DNA MER1_type 1 189 0 32 26 0 0 chr5 138949980 138950019 -60680131 + AT_rich Low_complexity Low_complexity 1 39 0 315 305 157 19 chr5 138950456 138950718 -60679432 + L1MC/D LINE L1 4943 5240 -906 734 169 65 0 chr5 138950828 138950952 -60679198 + AluJb SINE Alu 3 134 -178 310 248 95 9 chr5 138950959 138951064 -60679086 + L1MC/D LINE L1 5370 5483 -2325 1239 175 72 84 chr5 138951064 138951466 -60678684 - MSTD LTR MaLR 0 432 1 4188 251 99 37 chr5 138951466 138952723 -60677427 - MSTD-int LTR MaLR 0 1735 402 3942 94 11 0 chr5 138952728 138953281 -60676869 - L1PB1 LINE L1 0 6151 5593 * 11238 59 5 1 chr5 138953278 138955494 -60674656 - L1PA5 LINE L1 0 6154 3935 25490 79 5 8 chr5 138955497 138958995 -60671155 + L1PA5 LINE L1 462 3950 -2196 2111 155 43 15 chr5 138958991 138959608 -60670542 - L1PB1 LINE L1 -544 5607 4974 * 24932 155 12 18 chr5 138959598 138965674 -60664476 - L1PA10 LINE L1 0 6483 383 2538 211 49 7 chr5 138965661 138966212 -60663938 - L1PA10 LINE L1 -5297 578 5 * 262 146 104 0 chr5 138966216 138966264 -60663886 - L1PB1 LINE L1 -1155 4991 4939 1681 175 3 50 chr5 138966268 138966650 -60663500 + L1PB1 LINE L1 4553 4916 -1230 1809 222 22 2 chr5 138966654 138967055 -60663095 - MSTD-int LTR MaLR -1325 410 2 1654 192 60 31 chr5 138967057 138967442 -60662708 - MSTD LTR MaLR 0 396 1 741 324 59 36 chr5 138967453 138967996 -60662154 + L2 LINE L2 2753 3313 0 1570 189 22 4 chr5 138968164 138968481 -60661669 + AluJb SINE Alu 3 324 0 227 258 54 109 chr5 138968489 138968710 -60661440 + L1MC/D LINE L1 5610 5818 -1990 33 66 0 0 chr5 138969034 138969095 -60661055 + AT_rich Low_complexity Low_complexity 1 61 0 215 317 113 42 chr5 138970372 138970514 -60659636 - L3b LINE CR1 -37 1546 1395 23 68 0 0 chr5 138971273 138971317 -60658833 + AT_rich Low_complexity Low_complexity 1 44 0 321 370 111 0 chr5 138971477 138971658 -60658492 + MIR SINE MIR 12 212 -50 321 331 71 11 chr5 138972327 138972511 -60657639 - LTR67 LTR ERVL 0 557 363 322 281 73 0 chr5 138972625 138972721 -60657429 - LTR67 LTR ERVL -351 206 104 4452 118 27 15 chr5 138972944 138973687 -60656463 - Tigger3(Golem) DNA MER2_type -1 3028 2277 626 168 9 0 chr5 138973678 138973785 -60656365 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 28 29 0 0 chr5 138974134 138974169 -60655981 + AT_rich Low_complexity Low_complexity 1 35 0 267 306 82 0 chr5 138974234 138974332 -60655818 - MIR SINE MIR -98 164 59 22 56 0 0 chr5 138975416 138975452 -60654698 + AT_rich Low_complexity Low_complexity 1 36 0 195 288 237 62 chr5 138976900 138977077 -60653073 - MIR SINE MIR -49 213 6 499 285 35 29 chr5 138977242 138977414 -60652736 + MER5B DNA MER1_type 2 174 -4 21 0 0 0 chr5 138977472 138977493 -60652657 + AT_rich Low_complexity Low_complexity 1 21 0 1047 287 84 30 chr5 138978367 138978830 -60651320 + LTR33 LTR ERVL 1 488 -33 180 200 0 0 chr5 138979007 138979047 -60651103 + CT-rich Low_complexity Low_complexity 1 40 0 522 306 109 78 chr5 138979336 138979722 -60650428 - L2 LINE L2 0 3272 2875 383 291 204 0 chr5 138979929 138980101 -60650049 - MIR SINE MIR -8 254 48 358 282 63 46 chr5 138981886 138982060 -60648090 - MIR SINE MIR -42 220 44 324 310 16 23 chr5 138984552 138984681 -60645469 + MIR SINE MIR 30 157 -105 298 381 36 7 chr5 138984838 138984977 -60645173 - L2 LINE L2 -21 3251 3109 288 194 16 0 chr5 138985260 138985322 -60644828 + MER94 DNA DNA 27 89 -45 378 307 57 7 chr5 138985977 138986117 -60644033 + MIR SINE MIR 59 205 -57 374 149 0 14 chr5 138986174 138986248 -60643902 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 1027 320 100 6 chr5 138987348 138987710 -60642440 + L2 LINE L2 2790 3208 -105 348 24 0 0 chr5 138987710 138987751 -60642399 + (TG)n Simple_repeat Simple_repeat 2 42 0 1027 320 100 6 chr5 138987751 138987867 -60642283 + L2 LINE L2 3208 3312 -1 4685 244 76 25 chr5 138989342 138992029 -60638121 - L1M4 LINE L1 -2971 4135 1262 333 308 38 59 chr5 138992285 138992522 -60637628 - L1M4 LINE L1 -6798 232 1 242 322 17 8 chr5 138993013 138993150 -60637000 + L1MC/D LINE L1 5473 5611 -551 232 48 48 0 chr5 138993215 138993257 -60636893 + (TA)n Simple_repeat Simple_repeat 2 45 0 692 93 0 0 chr5 138993450 138993547 -60636603 + L1PA6 LINE L1 6052 6148 -6 212 164 60 15 chr5 138993548 138993615 -60636535 + (TATAA)n Simple_repeat Simple_repeat 3 72 0 23 86 0 0 chr5 138993730 138993788 -60636362 + AT_rich Low_complexity Low_complexity 1 58 0 52 58 0 0 chr5 138993823 138993910 -60636240 + AT_rich Low_complexity Low_complexity 1 87 0 240 226 0 0 chr5 138994095 138994157 -60635993 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 25 51 0 0 chr5 138994451 138994490 -60635660 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr5 138995742 138995767 -60634383 + AT_rich Low_complexity Low_complexity 1 25 0 202 194 0 0 chr5 138996355 138996391 -60633759 + CT-rich Low_complexity Low_complexity 2 37 0 1295 200 41 13 chr5 138996466 138996783 -60633367 + MER33 DNA MER1_type 1 319 -5 574 242 21 100 chr5 138996809 138996999 -60633151 - MIR SINE MIR -10 252 78 22 0 0 0 chr5 138997017 138997039 -60633111 + AT_rich Low_complexity Low_complexity 1 22 0 29 60 0 0 chr5 138998114 138998164 -60631986 + AT_rich Low_complexity Low_complexity 1 50 0 300 143 0 0 chr5 138999932 138999988 -60630162 + (TG)n Simple_repeat Simple_repeat 2 57 0 194 446 14 7 chr5 139000566 139000705 -60629445 + MIR3 SINE MIR 16 155 -53 345 361 25 0 chr5 139001093 139001212 -60628938 + L2 LINE L2 3151 3272 0 1583 203 15 54 chr5 139002452 139002841 -60627309 + MLT1A2 LTR MaLR 1 374 0 2251 145 5 27 chr5 139002868 139002916 -60627234 - THE1B LTR MaLR 0 364 316 1567 188 116 9 chr5 139002916 139003245 -60626905 - THE1B LTR MaLR 0 364 1 11288 91 25 1 chr5 139003245 139004789 -60625361 - THE1B-int LTR MaLR 0 1580 1 2001 157 36 17 chr5 139004790 139005146 -60625004 - THE1B LTR MaLR -1 363 1 2251 145 5 27 chr5 139005146 139005466 -60624684 - THE1B LTR MaLR -46 318 1 1515 220 3 3 chr5 139005516 139005802 -60624348 + AluJo SINE Alu 5 290 -22 231 36 0 0 chr5 139005803 139005831 -60624319 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 243 0 0 0 chr5 139005830 139005857 -60624293 + (CA)n Simple_repeat Simple_repeat 2 28 0 32 26 0 0 chr5 139005947 139005986 -60624164 + AT_rich Low_complexity Low_complexity 1 39 0 634 271 106 40 chr5 139006040 139006571 -60623579 - HAL1 LINE L1 -78 2429 1864 687 258 115 5 chr5 139006640 139006857 -60623293 - HAL1 LINE L1 -762 1745 1505 365 286 104 45 chr5 139006893 139007162 -60622988 - HAL1 LINE L1 -1485 1022 738 2794 184 31 12 chr5 139007357 139007846 -60622304 - L1M4 LINE L1 -3498 2884 2406 965 251 75 36 chr5 139007846 139008177 -60621973 - MER2 DNA MER2_type 0 344 1 2794 184 31 12 chr5 139008177 139008941 -60621209 - L1M4 LINE L1 -3976 2406 1516 409 128 39 44 chr5 139009069 139009249 -60620901 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 255 112 69 43 chr5 139009260 139009376 -60620774 + (TA)n Simple_repeat Simple_repeat 2 120 0 254 255 64 32 chr5 139009731 139009825 -60620325 + MARNA DNA Mariner 163 259 -327 248 40 101 30 chr5 139012149 139012248 -60617902 + (TA)n Simple_repeat Simple_repeat 1 106 0 9740 27 3 0 chr5 139012359 139013517 -60616633 - L1PA2 LINE L1 -1080 5066 3906 7560 26 0 3 chr5 139013517 139014605 -60615545 + L1PA2 LINE L1 5071 6155 0 542 248 96 6 chr5 139014770 139014927 -60615223 - MIR SINE MIR -5 257 87 305 256 57 161 chr5 139015666 139015877 -60614273 - MIR SINE MIR -11 251 63 856 297 20 36 chr5 139016653 139016956 -60613194 + MLT1I LTR MaLR 106 403 -6 358 281 96 27 chr5 139017246 139017392 -60612758 - L2 LINE L2 0 3313 3158 305 371 81 30 chr5 139017518 139017852 -60612298 - L2 LINE L2 -338 2976 2626 2133 211 30 9 chr5 139017911 139018559 -60611591 - L1M4 LINE L1 -614 5564 4903 2105 66 0 0 chr5 139018619 139018876 -60611274 + AluY SINE Alu 42 298 -13 1515 248 78 11 chr5 139018979 139019617 -60610533 + L1M4b LINE L1 945 1611 -4773 * 4445 50 5 2 chr5 139019615 139020180 -60609970 - L1P LINE L1 -2165 3981 3415 * 8782 47 4 1 chr5 139020179 139021272 -60608878 + L1P LINE L1 4000 5095 -1051 6633 189 60 13 chr5 139021372 139022758 -60607392 - L1M4c LINE L1 -4916 1468 18 330 310 16 92 chr5 139023030 139023333 -60606817 - HAL1 LINE L1 -2226 281 2 417 327 91 35 chr5 139023744 139024172 -60605978 - L2 LINE L2 -659 2655 2204 330 338 139 14 chr5 139024209 139024425 -60605725 - MIR SINE MIR 0 262 20 472 346 42 24 chr5 139024477 139024766 -60605384 - L2 LINE L2 -1198 2116 1823 21 36 0 0 chr5 139025002 139025030 -60605120 + AT_rich Low_complexity Low_complexity 1 28 0 345 246 63 76 chr5 139025197 139025369 -60604781 - L1ME4a LINE L1 -193 5928 5760 1554 124 12 0 chr5 139025369 139025618 -60604532 - L1MA5A LINE L1 0 6297 6046 345 246 63 76 chr5 139025618 139025762 -60604388 - L1ME4a LINE L1 -361 5760 5616 518 344 75 36 chr5 139025954 139026393 -60603757 - L2 LINE L2 -1899 1415 960 2248 97 0 7 chr5 139027262 139027561 -60602589 - AluSg SINE Alu -13 297 1 267 333 10 10 chr5 139027696 139027795 -60602355 - L2 LINE L2 -5 3267 3169 2725 122 18 14 chr5 139027864 139028271 -60601879 + MLT2A1 LTR ERVL 1 412 -32 209 33 33 0 chr5 139028271 139028301 -60601849 + (TA)n Simple_repeat Simple_repeat 2 32 0 2725 122 18 14 chr5 139028301 139028335 -60601815 + MLT2A1 LTR ERVL 412 444 0 498 315 76 30 chr5 139028337 139028685 -60601465 - HERV16 LTR ERVL -1183 4302 4080 424 302 114 31 chr5 139028997 139029252 -60600898 - HERV16 LTR ERVL -1811 3953 3678 2037 205 49 27 chr5 139029450 139029979 -60600171 + MER34 LTR ERV1 11 540 -2 910 337 38 44 chr5 139030000 139030648 -60599502 - HERV16 LTR ERVL -2390 3374 2714 1702 171 4 4 chr5 139030674 139030955 -60599195 - AluJb SINE Alu -31 281 1 561 327 52 52 chr5 139031375 139031488 -60598662 - HERV16 LTR ERVL -3027 1969 1981 7887 9 0 0 chr5 139031488 139032581 -60597569 - L1PA2 LINE L1 0 6155 5060 561 327 52 52 chr5 139032581 139032816 -60597334 - HERV16 LTR ERVL -3014 1982 1748 396 337 0 0 chr5 139032983 139033084 -60597066 - HERV16 LTR ERVL -4158 1606 1506 1335 231 57 44 chr5 139034408 139034546 -60595604 - LTR16C LTR ERVL -2 489 354 2408 102 13 31 chr5 139034546 139034928 -60595222 + THE1C LTR MaLR 1 375 0 1335 231 57 44 chr5 139034928 139035195 -60594955 - LTR16C LTR ERVL -137 354 79 811 178 191 54 chr5 139036164 139036475 -60593675 + MSTD LTR MaLR 3 395 -1 1944 191 37 33 chr5 139037588 139037833 -60592317 + Charlie4a DNA MER1_type 20 262 -1699 2130 137 25 17 chr5 139037833 139038192 -60591958 + THE1B LTR MaLR 3 364 0 1944 191 37 33 chr5 139038192 139038388 -60591762 + Charlie4a DNA MER1_type 262 466 -1495 2012 191 74 25 chr5 139038388 139038833 -60591317 - MLT1C LTR MaLR 0 467 1 1944 191 37 33 chr5 139038833 139038873 -60591277 + Charlie4a DNA MER1_type 466 504 -4 458 302 35 17 chr5 139039586 139039758 -60590392 - MIR SINE MIR -23 239 65 505 252 25 0 chr5 139040366 139040485 -60589665 + MER63 DNA MER1_type 6 753 -83 2596 125 96 11 chr5 139040485 139040933 -60589217 + LTR19A LTR ERV1 1 486 0 16402 117 40 3 chr5 139040933 139043303 -60586847 + HERVFH19I LTR ERV1 1 2456 -5263 12195 92 6 13 chr5 139043304 139045024 -60585126 + HERVFH19I LTR ERV1 2617 4324 -3395 5179 124 51 12 chr5 139045270 139046777 -60583373 + L1PA16 LINE L1 4615 6166 0 23 0 0 0 chr5 139048741 139048764 -60581386 + AT_rich Low_complexity Low_complexity 1 23 0 233 317 42 17 chr5 139050308 139050428 -60579722 - L1M4c LINE L1 -4606 1778 1656 198 372 124 0 chr5 139050700 139050813 -60579337 - MIR3 SINE MIR -45 163 37 25 65 0 0 chr5 139051197 139051243 -60578907 + AT_rich Low_complexity Low_complexity 1 46 0 207 100 0 0 chr5 139051950 139051980 -60578170 + (TATG)n Simple_repeat Simple_repeat 1 30 0 240 379 72 24 chr5 139054031 139054487 -60575663 + L2 LINE L2 1872 2349 -965 418 324 46 11 chr5 139055294 139055578 -60574572 + L1MEc LINE L1 1982 2275 -4121 5445 170 35 34 chr5 139055753 139056156 -60573994 - L1MA7 LINE L1 -31 6846 6445 2498 59 0 3 chr5 139056156 139056460 -60573690 + AluY SINE Alu 4 306 -5 5445 170 35 34 chr5 139056460 139057926 -60572224 - L1MA7 LINE L1 -432 6445 4968 2280 100 3 0 chr5 139057926 139058226 -60571924 - AluSc SINE Alu -8 301 1 5445 170 35 34 chr5 139058226 139058507 -60571643 - L1MA7 LINE L1 -1909 4968 4689 5080 218 33 3 chr5 139058504 139059749 -60570401 - L1MA7 LINE L1 -2392 4340 3059 * 278 212 15 0 chr5 139059803 139059869 -60570281 - L1MA7 LINE L1 -3657 3075 3009 13549 164 42 13 chr5 139059881 139065568 -60564582 - L1PB1 LINE L1 -10 6857 995 735 197 55 0 chr5 139065564 139065747 -60564403 - L1PB1 LINE L1 -6665 198 6 * 10060 237 68 34 chr5 139065776 139066584 -60563566 - L1MA7 LINE L1 -3746 2986 2207 265 89 0 0 chr5 139066584 139066629 -60563521 - Alu SINE Alu 0 300 256 10060 237 68 34 chr5 139066629 139067034 -60563116 - L1MA7 LINE L1 -4525 2207 1817 2105 158 0 0 chr5 139067034 139067345 -60562805 - AluSx SINE Alu -1 311 1 10060 237 68 34 chr5 139067345 139069804 -60560346 - L1MA7 LINE L1 -4915 1817 2 1939 233 108 45 chr5 139069828 139070304 -60559846 + L1ME1 LINE L1 5110 5554 -780 231 114 0 0 chr5 139070304 139070339 -60559811 + (CA)n Simple_repeat Simple_repeat 2 36 0 1939 233 108 45 chr5 139070339 139070863 -60559287 + L1ME1 LINE L1 5554 6332 -2 3795 125 7 8 chr5 139071241 139071842 -60558308 + L1PA14 LINE L1 5561 6160 -1 5755 180 48 20 chr5 139071897 139073352 -60556798 - L1MC1 LINE L1 0 6333 4848 294 266 23 0 chr5 139074407 139074535 -60555615 + CT-rich Low_complexity Low_complexity 3 133 0 30 59 0 0 chr5 139074588 139074639 -60555511 + AT_rich Low_complexity Low_complexity 1 51 0 253 253 0 77 chr5 139074980 139075071 -60555079 - MIR3 SINE MIR -5 203 120 230 69 0 0 chr5 139075242 139075271 -60554879 + (T)n Simple_repeat Simple_repeat 1 29 0 22 70 0 0 chr5 139075297 139075340 -60554810 + AT_rich Low_complexity Low_complexity 1 43 0 309 151 0 0 chr5 139075344 139075397 -60554753 + T-rich Low_complexity Low_complexity 1 53 0 3141 32 0 0 chr5 139075398 139075767 -60554383 - L1PA3 LINE L1 -3 6152 5784 13174 31 0 0 chr5 139075767 139077358 -60552792 + L1P LINE L1 2744 4334 -1812 185 281 292 0 chr5 139078594 139078683 -60551467 + MIR SINE MIR 35 149 -59 256 310 49 59 chr5 139078873 139079076 -60551074 - HAL1 LINE L1 -6 2501 2301 2120 238 63 31 chr5 139079803 139080649 -60549501 - L1M4c LINE L1 -3037 3345 2473 777 253 47 48 chr5 139080644 139081150 -60549000 - L1M4c LINE L1 -4318 2245 1591 * 7074 52 0 2 chr5 139081170 139082066 -60548084 - L1PA5 LINE L1 -7 6147 5254 777 173 23 0 chr5 139082281 139082454 -60547696 + CT-rich Low_complexity Low_complexity 2 178 0 300 111 0 0 chr5 139082467 139082512 -60547638 + (CA)n Simple_repeat Simple_repeat 2 46 0 203 273 18 0 chr5 139082514 139082569 -60547581 - L2 LINE L2 -33 3280 3225 403 334 149 15 chr5 139083124 139083666 -60546484 + MLT1L LTR MaLR 1 615 0 387 163 0 0 chr5 139083738 139083818 -60546332 + (TA)n Simple_repeat Simple_repeat 2 81 0 296 282 61 44 chr5 139084186 139084367 -60545783 + MLT1K LTR MaLR 322 505 -83 1665 240 59 45 chr5 139084385 139084947 -60545203 + MLT1E2 LTR MaLR 1 570 -56 1814 129 83 0 chr5 139084948 139085226 -60544924 + AluSx SINE Alu 1 301 -11 237 33 0 0 chr5 139085226 139085256 -60544894 + (TA)n Simple_repeat Simple_repeat 2 31 0 957 175 6 0 chr5 139085256 139085422 -60544728 + FRAM SINE Alu 3 169 -7 435 169 0 0 chr5 139085426 139085503 -60544647 + MLT1E2 LTR MaLR 550 626 0 22 35 0 0 chr5 139085638 139085667 -60544483 + AT_rich Low_complexity Low_complexity 1 29 0 677 224 82 34 chr5 139086142 139086440 -60543710 - MER77 LTR ERV1 -250 355 3 987 194 15 113 chr5 139087438 139087651 -60542499 - MLT2B3 LTR ERVL -257 297 126 2304 168 18 63 chr5 139087651 139088158 -60541992 - MER66B LTR ERV1 -2 484 1 987 194 15 113 chr5 139088158 139088273 -60541877 - MLT2B3 LTR ERVL -428 126 1 5549 121 86 69 chr5 139089575 139090650 -60539500 + Tigger3b DNA MER2_type 2 1101 -1927 2135 154 9 3 chr5 139090650 139090982 -60539168 - MER1B DNA MER1_type 0 337 4 5549 121 86 69 chr5 139090982 139091116 -60539034 + Tigger3b DNA MER2_type 1101 1231 0 249 33 0 0 chr5 139091247 139091277 -60538873 + (TG)n Simple_repeat Simple_repeat 1 30 0 1045 214 23 9 chr5 139091471 139091691 -60538459 - MER58A DNA MER1_type 0 224 2 582 73 0 0 chr5 139091781 139091863 -60538287 - L1PA8 LINE L1 -1 6171 6090 188 330 121 0 chr5 139091881 139091972 -60538178 + L2 LINE L2 3169 3270 -2 507 316 26 5 chr5 139093338 139093531 -60536619 - LTR16A LTR ERVL -14 436 240 758 283 45 25 chr5 139093779 139094065 -60536085 + ERVL LTR ERVL 888 1179 -3817 2046 144 37 55 chr5 139094066 139094503 -60535647 + Tigger2a DNA MER2_type 6 434 0 1472 303 57 34 chr5 139094805 139095444 -60534706 + ERVL LTR ERVL 1606 2264 -2732 750 237 0 30 chr5 139095444 139095613 -60534537 + FRAM SINE Alu 1 164 -2 1472 303 57 34 chr5 139095613 139095680 -60534470 + ERVL LTR ERVL 2264 2328 -2668 330 242 73 24 chr5 139095704 139095828 -60534322 + MER3 DNA MER1_type 80 209 0 812 341 45 29 chr5 139095840 139096570 -60533580 + ERVL LTR ERVL 2334 3075 -2579 197 163 20 0 chr5 139096792 139096841 -60533309 + GA-rich Low_complexity Low_complexity 4 53 0 405 259 30 52 chr5 139096931 139097066 -60533084 - MIR SINE MIR -129 133 2 1390 131 0 0 chr5 139097462 139097676 -60532474 - MER4B LTR ERV1 0 610 397 519 222 0 0 chr5 139097677 139097776 -60532374 - AluJ/FLAM SINE Alu -213 99 1 225 0 0 0 chr5 139099078 139099103 -60531047 + (A)n Simple_repeat Simple_repeat 1 25 0 784 312 74 45 chr5 139099577 139100061 -60530089 + L2 LINE L2 2812 3309 -4 296 278 90 27 chr5 139100712 139101260 -60528890 - L1M4 LINE L1 -403 5775 5150 23 0 0 0 chr5 139101501 139101524 -60528626 + AT_rich Low_complexity Low_complexity 1 23 0 523 274 13 0 chr5 139103161 139103314 -60526836 + ERVL LTR ERVL 2360 2514 -3250 328 361 5 25 chr5 139103534 139103736 -60526414 + ERVL LTR ERVL 2800 2997 -2657 500 314 44 16 chr5 139103820 139104068 -60526082 + ERVL LTR ERVL 3177 3431 -2333 602 0 27 0 chr5 139104153 139104226 -60525924 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 2284 133 25 17 chr5 139104361 139104722 -60525428 + THE1B LTR MaLR 1 364 0 265 336 66 40 chr5 139104989 139105337 -60524813 + ERVL LTR ERVL 3911 4267 -1387 27 0 0 0 chr5 139105473 139105500 -60524650 + AT_rich Low_complexity Low_complexity 1 27 0 608 339 54 9 chr5 139105640 139105956 -60524194 + ERVL LTR ERVL 4740 5069 -695 462 273 12 24 chr5 139106049 139106214 -60523936 + ERVL LTR ERVL 5218 5380 -384 2317 103 13 46 chr5 139106452 139106840 -60523310 + THE1C LTR MaLR 1 375 0 1491 201 50 47 chr5 139106850 139107214 -60522936 - MLT1A1 LTR MaLR 0 365 1 3938 177 58 19 chr5 139107338 139108133 -60522017 - LTR1B LTR ERV1 0 826 1 210 250 18 0 chr5 139109507 139109563 -60520587 + CT-rich Low_complexity Low_complexity 2 58 0 308 257 14 0 chr5 139112460 139112534 -60517616 + MIR SINE MIR 188 262 0 564 284 151 0 chr5 139112706 139112924 -60517226 - MIR SINE MIR -10 252 2 233 260 0 0 chr5 139112978 139113028 -60517122 + L2 LINE L2 3256 3305 -8 3135 128 6 0 chr5 139113047 139113522 -60516628 - MER1A DNA MER1_type 0 529 52 277 311 94 80 chr5 139113592 139113707 -60516443 - MIR SINE MIR 0 262 140 1572 188 22 0 chr5 139113707 139114032 -60516118 + AluJb SINE Alu 1 331 0 277 311 94 80 chr5 139114032 139114127 -60516023 - MIR SINE MIR -122 140 48 230 254 15 45 chr5 139114334 139114401 -60515749 + L2 LINE L2 3235 3299 -14 24 0 0 0 chr5 139117425 139117449 -60512701 + AT_rich Low_complexity Low_complexity 1 24 0 190 308 15 15 chr5 139121076 139121141 -60509009 - MIR SINE MIR -170 92 28 190 264 19 19 chr5 139121164 139121217 -60508933 - L2 LINE L2 -6 3266 3214 400 81 16 0 chr5 139121243 139121305 -60508845 - Ricksha DNA DNA -496 2750 2688 7283 39 18 0 chr5 139121319 139122296 -60507854 - L1PA4 LINE L1 0 6155 5175 207 0 0 0 chr5 139122296 139122319 -60507831 + (T)n Simple_repeat Simple_repeat 1 23 0 28 29 0 0 chr5 139122389 139122424 -60507726 + AT_rich Low_complexity Low_complexity 1 35 0 1461 55 5 5 chr5 139122424 139122624 -60507526 - L1HS LINE L1 0 6155 5956 * 22312 44 4 1 chr5 139122604 139125548 -60504602 - L1PA4 LINE L1 -958 5188 2237 3213 115 2 0 chr5 139125543 139126013 -60504137 - L1PA4 LINE L1 -5665 481 11 * 4287 160 18 38 chr5 139126477 139126791 -60503359 - Ricksha DNA DNA -8 3238 2919 2277 112 0 0 chr5 139126791 139127087 -60503063 + AluSx SINE Alu 1 296 -16 4287 160 18 38 chr5 139127087 139127403 -60502747 - Ricksha DNA DNA -327 2919 2598 2281 98 0 0 chr5 139127403 139127698 -60502452 - AluY SINE Alu -16 295 1 4287 160 18 38 chr5 139127698 139128678 -60501472 - Ricksha DNA DNA -648 2598 1690 300 106 0 0 chr5 139128677 139128724 -60501426 - Ricksha DNA DNA -1761 285 239 * 503 194 10 0 chr5 139128740 139128838 -60501312 - Ricksha DNA DNA -3147 99 1 551 295 116 14 chr5 139130008 139130215 -60499935 - MIR SINE MIR -4 258 31 2026 84 8 4 chr5 139130485 139130747 -60499403 + AluSq SINE Alu 1 263 -50 22 0 0 0 chr5 139132132 139132154 -60497996 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr5 139133509 139133551 -60496599 + AT_rich Low_complexity Low_complexity 1 42 0 206 359 75 67 chr5 139133625 139134012 -60496138 + L2 LINE L2 2866 3255 -17 228 227 0 0 chr5 139135180 139135224 -60494926 + (TG)n Simple_repeat Simple_repeat 2 45 0 2162 189 35 65 chr5 139136078 139136329 -60493821 + MLT1D LTR MaLR 1 229 -276 2270 116 0 0 chr5 139136329 139136631 -60493519 - AluSx SINE Alu -10 302 1 2162 189 35 65 chr5 139136631 139136898 -60493252 + MLT1D LTR MaLR 229 503 -2 695 299 47 5 chr5 139136922 139137136 -60493014 + MIR SINE MIR 8 230 -32 29 0 0 0 chr5 139138009 139138038 -60492112 + AT_rich Low_complexity Low_complexity 1 29 0 942 129 42 0 chr5 139138038 139138279 -60491871 - L1PB1 LINE L1 -5 6146 5829 222 239 60 60 chr5 139138791 139138858 -60491292 - L2 LINE L2 -1 3312 3246 685 295 109 34 chr5 139140619 139141139 -60489011 - L2 LINE L2 0 3313 2746 705 243 55 11 chr5 139141139 139141320 -60488830 + MER5A DNA MER1_type 1 189 0 685 295 109 34 chr5 139141320 139141361 -60488789 - L2 LINE L2 -567 2746 2709 299 244 30 104 chr5 139141558 139141693 -60488457 + MER94 DNA DNA 1 125 -9 451 259 15 102 chr5 139142563 139142724 -60487426 + MER5A DNA MER1_type 2 143 -46 2158 85 20 3 chr5 139142724 139143030 -60487120 - AluY SINE Alu 0 311 1 451 259 15 102 chr5 139143030 139143073 -60487077 + MER5A DNA MER1_type 143 188 -1 306 50 0 0 chr5 139143500 139143540 -60486610 + (CA)n Simple_repeat Simple_repeat 2 41 0 225 289 66 13 chr5 139144561 139144637 -60485513 + L2 LINE L2 3193 3272 0 643 348 114 34 chr5 139144814 139145403 -60484747 + L3 LINE CR1 79 714 -863 643 223 0 0 chr5 139145419 139145540 -60484610 + L1MD1 LINE L1 10 130 -6279 1232 192 63 42 chr5 139145541 139145827 -60484323 + MLT1D LTR MaLR 7 298 -207 2745 217 102 60 chr5 139145827 139147284 -60482866 + L1MD1 LINE L1 1100 2601 -3805 305 169 91 0 chr5 139147293 139147370 -60482780 + L1MD1 LINE L1 3108 3191 -3215 * 414 262 109 15 chr5 139147366 139147568 -60482582 - L1MDa LINE L1 -4079 2461 2241 2481 226 46 23 chr5 139147581 139148363 -60481787 + L1MD1 LINE L1 3205 4004 -2402 428 213 0 12 chr5 139148365 139148444 -60481706 + Tigger5 DNA MER2_type 1 78 -2245 249 172 0 182 chr5 139148444 139148543 -60481607 - Tigger5 DNA MER2_type -3 2320 2240 * 307 278 0 0 chr5 139148523 139148595 -60481555 + Tigger5 DNA MER2_type 2252 2323 0 1271 208 75 23 chr5 139148708 139149118 -60481032 + MER39 LTR ERV1 223 565 0 868 256 46 3 chr5 139149143 139149428 -60480722 + L1MD1 LINE L1 4035 4331 -2075 3530 227 56 24 chr5 139149437 139151474 -60478676 + L1MD1 LINE L1 4408 6502 0 542 301 87 3 chr5 139151537 139151826 -60478324 - L1MDa LINE L1 -4564 1976 1664 1434 272 72 49 chr5 139151936 139152549 -60477601 + L1M4 LINE L1 15 641 -5901 1331 234 92 49 chr5 139152560 139153051 -60477099 + LTR53 LTR ERVL 1 512 -7 1709 194 135 34 chr5 139153051 139153524 -60476626 + L1M4 LINE L1 637 1157 -5385 343 249 101 0 chr5 139153526 139153695 -60476455 + L1M4 LINE L1 2629 2814 -4011 1833 244 116 20 chr5 139153711 139154736 -60475414 + L1ME1 LINE L1 2157 3256 -2959 1188 162 15 15 chr5 139154768 139154972 -60475178 - AluJo SINE Alu -108 204 1 247 288 102 23 chr5 139154974 139155151 -60474999 + L1ME1 LINE L1 3658 3848 -2367 * 2589 185 44 23 chr5 139155150 139155723 -60474427 - L1 LINE L1 -2141 4005 3421 3621 192 36 79 chr5 139155724 139156620 -60473530 + MER21B LTR ERV1 1 857 -6 3193 244 62 6 chr5 139156638 139157618 -60472532 - L1 LINE L1 -2722 3424 2390 1567 187 63 8 chr5 139157622 139157986 -60472164 + L1MA9 LINE L1 5892 6275 -37 3533 234 73 49 chr5 139158000 139158134 -60472016 + L1ME1 LINE L1 3863 3992 -2243 2117 116 0 13 chr5 139158134 139158435 -60471715 - AluSq SINE Alu -14 299 3 3533 234 73 49 chr5 139158435 139158677 -60471473 + L1ME1 LINE L1 3992 4227 -2008 189 0 0 0 chr5 139158677 139158698 -60471452 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3533 234 73 49 chr5 139158698 139159090 -60471060 + L1ME1 LINE L1 4227 4608 -1627 11013 104 4 10 chr5 139159090 139161528 -60468622 - L1PA8 LINE L1 0 6172 3740 3533 234 73 49 chr5 139161528 139163080 -60467070 + L1ME1 LINE L1 4608 6235 0 1218 245 193 6 chr5 139163086 139163653 -60466497 + L1ME2 LINE L1 5484 6153 -11 237 229 28 125 chr5 139163664 139163808 -60466342 + L1MC5 LINE L1 7772 7901 -60 191 333 61 0 chr5 139163931 139163997 -60466153 - L2 LINE L2 -613 2701 2632 447 268 121 6 chr5 139164000 139164157 -60465993 - L2 LINE L2 -1356 1958 1784 262 211 0 0 chr5 139165956 139166013 -60464137 + (CA)n Simple_repeat Simple_repeat 2 58 0 417 351 6 12 chr5 139166777 139166945 -60463205 - LTR67 LTR ERVL -344 213 47 562 221 23 0 chr5 139166989 139167120 -60463030 - HAL1 LINE L1 -737 1770 1637 648 301 120 29 chr5 139167124 139167749 -60462401 - HAL1b LINE L1 -418 930 249 1425 207 9 47 chr5 139168576 139168895 -60461255 + MER58B DNA MER1_type 13 319 -22 320 240 60 10 chr5 139172561 139172661 -60457489 + L1ME2 LINE L1 791 895 -5501 700 261 72 13 chr5 139172806 139173099 -60457051 + L1ME3A LINE L1 3817 4143 -2003 1631 164 10 33 chr5 139173100 139173405 -60456745 + THE1A LTR MaLR 53 350 -5 330 235 56 34 chr5 139173497 139173676 -60456474 + L1ME2 LINE L1 917 1099 -5106 2591 155 37 33 chr5 139173781 139174272 -60455878 + Tigger5 DNA MER2_type 1831 2323 0 857 196 20 0 chr5 139174281 139174434 -60455716 - MSTD LTR MaLR -11 385 230 2880 239 55 55 chr5 139174434 139176504 -60453646 + L1ME2 LINE L1 4159 6231 -2 1433 239 173 22 chr5 139176577 139177166 -60452984 + L1ME3A LINE L1 5485 6162 -8 195 42 0 0 chr5 139177353 139177377 -60452773 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 24 0 0 0 chr5 139178388 139178412 -60451738 + AT_rich Low_complexity Low_complexity 1 24 0 5208 101 13 1 chr5 139178546 139179300 -60450850 - L1PA14 LINE L1 -1 6160 5398 1383 146 5 0 chr5 139179300 139179505 -60450645 - AluSx SINE Alu -106 206 1 2636 129 15 35 chr5 139179505 139179961 -60450189 - L1MA4 LINE L1 -21 6279 5833 561 194 11 28 chr5 139181238 139181418 -60448732 + GA-rich Low_complexity Low_complexity 3 179 0 1829 298 59 20 chr5 139181466 139182442 -60447708 + L1MC5 LINE L1 4881 5399 -747 244 276 41 20 chr5 139182554 139182652 -60447498 + L1MC5 LINE L1 7273 7372 -589 309 274 177 43 chr5 139182784 139182970 -60447180 + L1MC4 LINE L1 7696 7906 -136 2091 263 78 43 chr5 139183884 139184149 -60446001 + L1ME1 LINE L1 4990 5244 -922 377 91 432 0 chr5 139184149 139184237 -60445913 - FLAM_C SINE Alu -7 126 1 2091 263 78 43 chr5 139184237 139185105 -60445045 + L1ME1 LINE L1 5244 6163 -3 317 278 71 33 chr5 139185114 139185326 -60444824 + HAL1b LINE L1 1128 1347 -1 318 67 0 0 chr5 139185955 139186000 -60444150 + (TC)n Simple_repeat Simple_repeat 2 46 0 198 0 0 0 chr5 139186000 139186022 -60444128 + (CA)n Simple_repeat Simple_repeat 1 22 0 2171 119 76 15 chr5 139186305 139186648 -60443502 + THE1B LTR MaLR 1 364 0 2978 55 3 0 chr5 139186844 139187224 -60442926 + L1PA8 LINE L1 5788 6168 -4 580 182 0 10 chr5 139187541 139187640 -60442510 - Tigger7 DNA MER2_type 0 2587 2490 1062 206 20 57 chr5 139187653 139187901 -60442249 - Tigger7 DNA MER2_type -2248 239 1 605 280 202 5 chr5 139189556 139189774 -60440376 - MIR SINE MIR -1 261 1 244 351 94 12 chr5 139191987 139192158 -60437992 + MER5A DNA MER1_type 3 187 -2 743 304 31 61 chr5 139194611 139195151 -60434999 + L2 LINE L2 2152 2675 -639 258 267 42 25 chr5 139196381 139196501 -60433649 - L1MC4 LINE L1 -1 8041 7920 2224 122 23 16 chr5 139196958 139197344 -60432806 - MLT1B LTR MaLR -1 389 1 496 276 71 71 chr5 139197450 139197787 -60432363 - L1MC/D LINE L1 -2155 5653 5317 822 299 111 49 chr5 139197800 139198805 -60431345 - L1MC/D LINE L1 -869 5277 4145 1603 122 88 0 chr5 139198805 139199068 -60431082 - L1PB3 LINE L1 0 6154 5869 822 299 111 49 chr5 139199068 139199586 -60430564 - L1MC/D LINE L1 -2001 4145 3660 774 276 52 66 chr5 139199878 139200240 -60429910 + MLT1J LTR MaLR 154 510 -1 295 296 11 0 chr5 139200621 139200709 -60429441 - HERV16 LTR ERVL -2208 2788 2700 379 311 13 107 chr5 139200713 139200938 -60429212 - LTR16B LTR ERVL -260 204 1 4228 236 68 33 chr5 139202135 139204496 -60425654 + L1ME1 LINE L1 3734 6334 0 5946 40 10 1 chr5 139205457 139206189 -60423961 - L1PA5 LINE L1 -8 6146 5409 388 310 47 18 chr5 139209719 139209890 -60420260 + MIR SINE MIR 73 248 -14 323 232 56 56 chr5 139210879 139211004 -60419146 + L2 LINE L2 3180 3304 -9 2140 102 0 3 chr5 139211017 139211332 -60418818 - AluSg SINE Alu 0 314 1 562 213 20 20 chr5 139214582 139214732 -60415418 - L1MB7 LINE L1 0 6184 6035 1682 151 11 15 chr5 139215209 139215474 -60414676 + MER1B DNA MER1_type 76 339 0 2295 106 0 0 chr5 139215528 139215831 -60414319 + AluSq SINE Alu 1 303 -10 323 366 28 0 chr5 139217981 139218123 -60412027 - L3 LINE CR1 -138 1439 1294 38 0 0 0 chr5 139219369 139219407 -60410743 + AT_rich Low_complexity Low_complexity 1 38 0 479 315 40 0 chr5 139220196 139220345 -60409805 - MIR3 SINE MIR -31 177 23 871 174 12 115 chr5 139220425 139220678 -60409472 + MER106A DNA MER1_type 10 236 0 223 306 166 26 chr5 139221007 139221200 -60408950 + MIR SINE MIR 40 259 -3 642 305 55 61 chr5 139221568 139221912 -60408238 - L2 LINE L2 0 3313 2972 277 264 42 0 chr5 139221936 139222008 -60408142 - L2 LINE L2 -487 2827 2753 190 349 0 0 chr5 139222035 139222098 -60408052 + L2 LINE L2 3210 3272 0 299 261 0 11 chr5 139222383 139222471 -60407679 + MER53 DNA DNA 13 99 -90 * 361 197 0 0 chr5 139222396 139222472 -60407678 - MER53 DNA DNA -14 175 100 312 305 148 48 chr5 139223942 139224335 -60405815 - LTR33A LTR ERVL -55 468 37 598 320 35 0 chr5 139225067 139225264 -60404886 - MIR SINE MIR -10 252 49 246 299 144 21 chr5 139227583 139227680 -60402470 + L2 LINE L2 3200 3308 -5 2011 266 42 12 chr5 139228407 139229062 -60401088 - L1ME3A LINE L1 -5 6165 5456 296 305 37 5 chr5 139229103 139229290 -60400860 - L1ME3A LINE L1 -778 5368 5176 375 373 20 13 chr5 139229772 139229925 -60400225 - L2 LINE L2 0 3272 3119 279 0 0 0 chr5 139230447 139230478 -60399672 + (TG)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr5 139230617 139230639 -60399511 + AT_rich Low_complexity Low_complexity 1 22 0 1990 121 7 3 chr5 139230860 139231150 -60399000 - AluSx SINE Alu -16 296 6 393 283 106 31 chr5 139231252 139231478 -60398672 - L1ME4a LINE L1 -114 6007 5765 395 354 57 6 chr5 139231910 139232068 -60398082 - L2 LINE L2 0 3272 3107 579 277 71 0 chr5 139232733 139232888 -60397262 - MER5B DNA MER1_type -12 166 1 360 294 100 22 chr5 139233780 139233960 -60396190 - L2 LINE L2 -5 3308 3115 774 311 165 15 chr5 139234042 139234562 -60395588 - L2 LINE L2 -341 2973 2376 6073 88 18 10 chr5 139234566 139234930 -60395220 + L1PA8A LINE L1 4868 5228 -903 2314 99 41 12 chr5 139234930 139235275 -60394875 - THE1A LTR MaLR 0 355 1 10928 97 22 10 chr5 139235275 139236836 -60393314 - THE1A-int LTR MaLR 0 1580 1 2415 96 38 3 chr5 139236836 139237179 -60392971 - THE1A LTR MaLR 0 355 1 6073 88 18 10 chr5 139237179 139238036 -60392114 + L1PA8A LINE L1 5227 6095 -36 292 324 61 20 chr5 139238083 139238231 -60391919 - L2 LINE L2 -944 2370 2217 953 223 54 81 chr5 139238288 139238821 -60391329 - L1MC5 LINE L1 -100 7861 7343 784 209 0 7 chr5 139238821 139238969 -60391181 - Tigger7 DNA MER2_type 0 2587 2441 1918 185 15 6 chr5 139238973 139239308 -60390842 - Tigger7 DNA MER2_type -212 338 1 366 164 0 0 chr5 139239398 139239465 -60390685 - L1MC5 LINE L1 -722 7239 7173 445 260 0 83 chr5 139239479 139239660 -60390490 - L1MC5 LINE L1 -1159 6802 6637 181 338 224 14 chr5 139239749 139240107 -60390043 - L2 LINE L2 -1090 2224 1792 2737 20 0 0 chr5 139241291 139241597 -60388553 - AluYa5 SINE Alu -5 306 1 23 0 0 0 chr5 139242511 139242534 -60387616 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 139245202 139245224 -60384926 + AT_rich Low_complexity Low_complexity 1 22 0 1381 251 79 28 chr5 139246352 139246881 -60383269 - L1ME3A LINE L1 -49 6121 5566 1458 85 0 0 chr5 139246883 139247083 -60383067 + L1MA1 LINE L1 6097 6296 -6 31 0 0 0 chr5 139247083 139247114 -60383036 + AT_rich Low_complexity Low_complexity 1 31 0 5785 141 27 6 chr5 139247403 139248734 -60381416 - L1PB1 LINE L1 -1 6866 5508 483 202 0 0 chr5 139248834 139248963 -60381187 + G-rich Low_complexity Low_complexity 1 129 0 25 0 0 0 chr5 139249240 139249265 -60380885 + AT_rich Low_complexity Low_complexity 1 25 0 710 168 0 168 chr5 139249469 139249701 -60380449 + 7SK RNA RNA 1 193 0 2010 127 13 32 chr5 139249739 139250055 -60380095 - AluSx SINE Alu -2 310 1 4051 142 71 85 chr5 139250895 139251318 -60378832 + L1MA6 LINE L1 5016 5443 -857 625 105 23 0 chr5 139251318 139251404 -60378746 + MLT2A1 LTR ERVL 200 287 -157 4051 142 71 85 chr5 139251404 139252108 -60378042 + L1MA6 LINE L1 5443 6186 -114 5180 189 72 4 chr5 139252208 139253540 -60376610 - L1PB1 LINE L1 -2789 4073 2649 9789 118 38 7 chr5 139253662 139255236 -60374914 + L1PBa LINE L1 1078 2699 -4164 1028 240 19 19 chr5 139255336 139255607 -60374543 + MER99 DNA DNA 553 823 -5 375 248 39 39 chr5 139255687 139255840 -60374310 - L1MC5 LINE L1 -36 7925 7773 4017 183 27 6 chr5 139255889 139256966 -60373184 + L1MB7 LINE L1 4913 6017 -167 463 305 0 0 chr5 139257182 139257359 -60372791 + G-rich Low_complexity Low_complexity 1 177 0 979 236 14 24 chr5 139257394 139257688 -60372462 + MLT1E LTR MaLR 334 591 -2 584 192 21 3 chr5 139257748 139257960 -60372190 + MER69 DNA AcHobo 296 568 -1958 * 821 234 124 3 chr5 139257947 139258314 -60371836 + MER69 DNA AcHobo 1999 2426 -100 3751 124 3 0 chr5 139258323 139258910 -60371240 - L1PA4 LINE L1 -3 6152 5564 327 85 0 0 chr5 139259331 139259378 -60370772 + (CA)n Simple_repeat Simple_repeat 2 48 0 487 283 53 0 chr5 139259754 139259906 -60370244 + MIR SINE MIR 88 247 -15 639 241 35 59 chr5 139260427 139260630 -60369520 - MIR SINE MIR -6 256 59 2079 117 3 19 chr5 139261120 139261436 -60368714 - AluSq SINE Alu -2 311 1 225 172 69 35 chr5 139262939 139262997 -60367153 + MSTC LTR MaLR 367 426 -2 4064 201 74 51 chr5 139262999 139263267 -60366883 + MSTC-int LTR MaLR 1 262 -1473 2620 29 3 16 chr5 139263267 139263579 -60366571 + AluY SINE Alu 1 308 -3 4064 201 74 51 chr5 139263579 139264302 -60365848 + MSTC-int LTR MaLR 262 1014 -721 571 276 97 51 chr5 139265705 139265922 -60364228 - MIR SINE MIR 0 262 36 869 257 95 48 chr5 139266229 139266642 -60363508 - MLT1E3 LTR MaLR -123 382 1 281 339 29 35 chr5 139266699 139266873 -60363277 + MIR3 SINE MIR 31 203 -5 927 296 118 18 chr5 139267797 139268289 -60361861 - L2 LINE L2 -1 3312 2741 1875 138 25 0 chr5 139268293 139268576 -60361574 + AluSx SINE Alu 1 290 -22 1294 48 127 5 chr5 139273341 139273530 -60356620 + L1MA1 LINE L1 6091 6302 0 326 23 23 0 chr5 139273894 139273937 -60356213 + (TC)n Simple_repeat Simple_repeat 1 44 0 375 303 56 25 chr5 139274293 139274455 -60355695 + MIR3 SINE MIR 35 201 -7 22 0 0 0 chr5 139276103 139276125 -60354025 + AT_rich Low_complexity Low_complexity 1 22 0 184 234 0 32 chr5 139276513 139276534 -60353616 + GA-rich Low_complexity Low_complexity 2 22 -70 2259 94 7 7 chr5 139276534 139276842 -60353308 + AluSc SINE Alu 2 309 0 184 234 0 32 chr5 139276842 139276914 -60353236 + GA-rich Low_complexity Low_complexity 22 92 0 4878 126 50 4 chr5 139277879 139278674 -60351476 - L1PBa LINE L1 -6031 832 1 22 35 0 0 chr5 139279104 139279133 -60351017 + AT_rich Low_complexity Low_complexity 1 29 0 208 68 23 23 chr5 139279139 139279183 -60350967 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 27194 28 7 1 chr5 139279185 139283290 -60346860 - L1PA2 LINE L1 -13 6142 2012 213 74 0 0 chr5 139284329 139284356 -60345794 + (CA)n Simple_repeat Simple_repeat 1 27 0 475 167 0 35 chr5 139284356 139284500 -60345650 + (TA)n Simple_repeat Simple_repeat 2 140 0 189 0 0 0 chr5 139284673 139284694 -60345456 + (A)n Simple_repeat Simple_repeat 1 21 0 2917 3 0 0 chr5 139285232 139285545 -60344605 - AluYb8 SINE Alu -5 313 1 26 0 0 0 chr5 139285581 139285607 -60344543 + AT_rich Low_complexity Low_complexity 1 26 0 204 179 0 0 chr5 139287690 139287729 -60342421 + GA-rich Low_complexity Low_complexity 1 39 0 686 286 62 9 chr5 139288452 139288662 -60341488 + MIR SINE MIR 21 241 -21 2186 133 44 29 chr5 139288723 139289051 -60341099 + MLT1B LTR MaLR 1 337 -53 1878 138 62 25 chr5 139289051 139289376 -60340774 + MER1B DNA MER1_type 1 337 0 2186 133 44 29 chr5 139289376 139289431 -60340719 + MLT1B LTR MaLR 337 390 0 279 339 17 8 chr5 139289456 139289574 -60340576 + Charlie8 DNA MER1_type 130 248 -2169 201 39 0 0 chr5 139290927 139290953 -60339197 + (A)n Simple_repeat Simple_repeat 1 26 0 24 32 0 0 chr5 139296229 139296260 -60333890 + AT_rich Low_complexity Low_complexity 1 31 0 319 389 37 0 chr5 139297507 139297615 -60332535 + L2 LINE L2 3151 3262 -10 2303 119 22 11 chr5 139298108 139298479 -60331671 + THE1C LTR MaLR 1 375 0 27 0 0 0 chr5 139298525 139298552 -60331598 + AT_rich Low_complexity Low_complexity 1 27 0 277 313 43 9 chr5 139298621 139298736 -60331414 - L2 LINE L2 -215 3057 2939 312 286 25 50 chr5 139298979 139299098 -60331052 - L2 LINE L2 -1 3312 3197 1774 245 83 10 chr5 139299193 139299687 -60330463 - MLT1F LTR MaLR -11 531 2 544 343 123 22 chr5 139300105 139300382 -60329768 - L3 LINE CR1 -44 1533 1229 397 179 0 0 chr5 139302650 139302717 -60327433 + MER94 DNA DNA 15 81 -53 1847 159 20 7 chr5 139303082 139303383 -60326767 - AluJo SINE Alu -7 305 1 715 261 85 44 chr5 139303867 139304237 -60325913 - MLT1I LTR MaLR -26 383 31 246 163 88 25 chr5 139304479 139304559 -60325591 - HAL1 LINE L1 -1478 1029 945 252 59 0 0 chr5 139304616 139304650 -60325500 + (TA)n Simple_repeat Simple_repeat 1 34 0 977 195 31 47 chr5 139305201 139305458 -60324692 - MER96B DNA MER1_type? -17 400 148 644 310 80 4 chr5 139306391 139306630 -60323520 - MIR SINE MIR -1 261 5 234 289 169 0 chr5 139306770 139306853 -60323297 + MIR3 SINE MIR 111 207 -1 27 0 0 0 chr5 139307269 139307296 -60322854 + AT_rich Low_complexity Low_complexity 1 27 0 808 282 133 20 chr5 139307343 139307682 -60322468 + L1ME3A LINE L1 5407 5819 -351 1619 189 111 8 chr5 139307682 139308041 -60322109 - MSTD LTR MaLR 0 396 1 808 282 133 20 chr5 139308041 139308190 -60321960 + L1ME3A LINE L1 5819 5950 -220 21 71 0 0 chr5 139308193 139308235 -60321915 + AT_rich Low_complexity Low_complexity 1 42 0 2113 129 14 0 chr5 139308808 139309103 -60321047 + AluSx SINE Alu 1 299 -13 1134 338 98 28 chr5 139309779 139310567 -60319583 + L2 LINE L2 757 1599 -1715 1118 241 128 31 chr5 139310573 139310925 -60319225 - MLT1F1 LTR MaLR 0 567 182 678 145 8 24 chr5 139311088 139311212 -60318938 - THE1C LTR MaLR -249 126 5 8090 217 44 11 chr5 139311215 139313245 -60316905 - L1 LINE L1 -1644 4502 2406 * 11203 128 109 9 chr5 139313233 139315131 -60315019 - L1PBa LINE L1 -4775 2088 1 2626 210 36 5 chr5 139315444 139316087 -60314063 + L1M3de LINE L1 1259 1945 -4516 625 268 86 88 chr5 139317406 139317790 -60312360 - L2 LINE L2 -1 3312 2930 1482 256 48 54 chr5 139317815 139318331 -60311819 + MLT1F LTR MaLR 29 541 -1 365 235 26 17 chr5 139318331 139318446 -60311704 + MLT1F-int LTR MaLR 30 145 -1226 359 264 91 0 chr5 139318623 139318733 -60311417 + MLT1F-int LTR MaLR 483 602 -769 358 247 0 43 chr5 139319004 139319097 -60311053 + MLT1F-int LTR MaLR 787 875 -496 340 299 43 122 chr5 139319202 139319663 -60310487 + MLT1F-int LTR MaLR 947 1371 0 1541 251 66 60 chr5 139319672 139319747 -60310403 + MLT1F LTR MaLR 10 83 -459 2531 143 39 2 chr5 139319747 139320160 -60309990 + MSTA LTR MaLR 1 428 0 1541 251 66 60 chr5 139320160 139320581 -60309569 + MLT1F LTR MaLR 83 509 -33 23 0 0 0 chr5 139321072 139321095 -60309055 + AT_rich Low_complexity Low_complexity 1 23 0 2028 104 36 128 chr5 139321665 139322078 -60308072 - THE1C LTR MaLR 0 375 1 204 241 103 58 chr5 139323420 139323507 -60306643 - L2 LINE L2 -295 2977 2887 481 279 214 0 chr5 139324281 139324496 -60305654 - MIR SINE MIR 0 262 2 5890 34 11 0 chr5 139324589 139325294 -60304856 + L1PA4 LINE L1 5440 6152 -3 28 29 0 0 chr5 139325294 139325329 -60304821 + AT_rich Low_complexity Low_complexity 1 35 0 12305 145 19 3 chr5 139326322 139328300 -60301850 - Tigger2 DNA MER2_type -708 2010 2 180 0 0 0 chr5 139328334 139328354 -60301796 + (GA)n Simple_repeat Simple_repeat 2 21 0 384 321 30 8 chr5 139328357 139328488 -60301662 + MER63A DNA MER1_type 71 204 -6 1168 186 112 14 chr5 139328496 139328781 -60301369 + L2 LINE L2 2466 2778 -536 479 258 116 37 chr5 139328799 139328989 -60301161 + L2 LINE L2 3109 3313 0 223 256 0 0 chr5 139329477 139329520 -60300630 - MIR SINE MIR -1 261 219 434 307 212 0 chr5 139329736 139329915 -60300235 - MIR SINE MIR -1 261 45 251 297 176 27 chr5 139330065 139330213 -60299937 + L2 LINE L2 3024 3193 -120 385 217 163 40 chr5 139330296 139330470 -60299680 - MIR SINE MIR -66 196 13 1435 124 32 130 chr5 139332821 139333159 -60296991 - MER1B DNA MER1_type 0 339 35 1415 103 0 0 chr5 139335265 139335449 -60294701 + AluSc SINE Alu 1 184 -125 591 202 0 18 chr5 139335453 139335674 -60294476 + (TA)n Simple_repeat Simple_repeat 1 216 0 204 40 0 0 chr5 139335831 139335856 -60294294 + (A)n Simple_repeat Simple_repeat 1 25 0 2729 26 0 0 chr5 139336394 139336707 -60293443 - AluYb8 SINE Alu -3 315 3 26 0 0 0 chr5 139336746 139336772 -60293378 + AT_rich Low_complexity Low_complexity 1 26 0 654 236 35 59 chr5 139387145 139387348 -60242802 - MIR SINE MIR -6 256 59 1201 153 15 5 chr5 139387351 139387547 -60242603 - AluJ SINE Alu 0 312 115 183 323 15 15 chr5 139387547 139387612 -60242538 - MIR SINE MIR -196 66 2 1244 213 32 59 chr5 139388245 139388620 -60241530 - MLT1A1 LTR MaLR 0 365 1 5733 201 125 38 chr5 139388688 139389911 -60240239 - MLT1A1-int LTR MaLR -112 1623 244 2657 29 0 16 chr5 139389911 139390223 -60239927 - AluY SINE Alu -4 307 1 5733 201 125 38 chr5 139390223 139390491 -60239659 - MLT1A1-int LTR MaLR -1491 244 1 1672 64 0 27 chr5 139390691 139390910 -60239240 - AluY SINE Alu -9 302 90 21 0 0 0 chr5 139390911 139390932 -60239218 + AT_rich Low_complexity Low_complexity 1 21 0 871 127 0 64 chr5 139390932 139391089 -60239061 + Tigger2a DNA MER2_type 2 148 -286 764 174 0 0 chr5 139391112 139391233 -60238917 - AluJ SINE Alu -191 121 1 1664 134 28 10 chr5 139391233 139391523 -60238627 + Tigger2a DNA MER2_type 148 442 -2 192 125 0 0 chr5 139391525 139391557 -60238593 + (TG)n Simple_repeat Simple_repeat 1 32 0 3810 183 27 6 chr5 139391649 139392726 -60237424 - L1MB7 LINE L1 -167 6017 4913 360 248 52 13 chr5 139392775 139392928 -60237222 + L1MC5 LINE L1 7773 7931 -30 2376 222 52 10 chr5 139393007 139393620 -60236530 - MER99 DNA DNA -5 823 185 21 82 0 0 chr5 139394154 139394203 -60235947 + AT_rich Low_complexity Low_complexity 1 49 0 388 240 20 0 chr5 139394259 139394359 -60235791 - MER99 DNA DNA -725 103 2 2231 110 0 19 chr5 139395139 139395458 -60234692 - AluSq SINE Alu 0 313 1 305 47 23 0 chr5 139396989 139397032 -60233118 + (TC)n Simple_repeat Simple_repeat 1 44 0 376 303 56 25 chr5 139397388 139397550 -60232600 + MIR3 SINE MIR 35 201 -7 22 0 0 0 chr5 139399199 139399221 -60230929 + AT_rich Low_complexity Low_complexity 1 22 0 350 257 18 18 chr5 139399586 139399630 -60230520 + GA-rich Low_complexity Low_complexity 4 47 -69 2357 86 0 16 chr5 139399630 139399943 -60230207 + AluSc SINE Alu 2 309 0 350 257 18 18 chr5 139399943 139400011 -60230139 + GA-rich Low_complexity Low_complexity 46 116 0 1353 48 122 0 chr5 139403081 139403270 -60226880 + L1MA1 LINE L1 6091 6302 0 453 257 171 10 chr5 139403495 139403636 -60226514 + MER5A DNA MER1_type 15 187 -2 183 379 88 33 chr5 139403846 139404028 -60226122 - L2 LINE L2 -667 2647 2456 264 304 174 7 chr5 139404191 139404329 -60225821 - L2 LINE L2 0 3313 3153 1770 169 13 26 chr5 139404409 139404711 -60225439 - AluJb SINE Alu -14 298 1 275 232 99 116 chr5 139405179 139405204 -60224946 + MLT1H1 LTR MaLR 1 25 -530 2324 95 7 0 chr5 139405204 139405500 -60224650 - AluSg SINE Alu -12 298 1 275 232 99 116 chr5 139405500 139405707 -60224443 + MLT1H1 LTR MaLR 25 229 -326 288 0 0 0 chr5 139405708 139405740 -60224410 + (A)n Simple_repeat Simple_repeat 1 32 0 245 323 70 38 chr5 139405749 139405907 -60224243 + MLT1H1 LTR MaLR 228 390 -200 241 229 133 19 chr5 139405937 139406042 -60224108 + MLT1H1 LTR MaLR 393 509 -33 324 0 0 0 chr5 139406254 139406290 -60223860 + (A)n Simple_repeat Simple_repeat 1 36 0 292 271 81 55 chr5 139406298 139406591 -60223559 + MLT1G LTR MaLR 228 509 -33 288 257 29 48 chr5 139406791 139406896 -60223254 - MIR3 SINE MIR -5 203 101 691 233 15 29 chr5 139407193 139407399 -60222751 + L1ME2 LINE L1 5944 6146 -18 40526 34 22 2 chr5 139407405 139413469 -60216681 + L1PA2 LINE L1 4 6188 0 23 33 0 0 chr5 139413475 139413505 -60216645 + AT_rich Low_complexity Low_complexity 1 30 0 16528 192 71 10 chr5 139413935 139419583 -60210567 + L1PBa LINE L1 1 6041 -821 2290 108 14 12 chr5 139419583 139419927 -60210223 + L1PB1 LINE L1 5800 6144 -7 623 223 144 13 chr5 139420094 139420323 -60209827 + MIR SINE MIR 2 260 -2 1643 173 20 23 chr5 139420337 139420638 -60209512 + AluJb SINE Alu 1 300 -12 1163 52 35 0 chr5 139420643 139420817 -60209333 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 192 111 0 0 chr5 139420960 139420996 -60209154 + (A)n Simple_repeat Simple_repeat 1 36 0 25 0 0 0 chr5 139421077 139421102 -60209048 + AT_rich Low_complexity Low_complexity 1 25 0 726 164 0 168 chr5 139421306 139421538 -60208612 + 7SK RNA RNA 1 193 0 2043 123 13 32 chr5 139421576 139421892 -60208258 - AluSx SINE Alu -2 310 1 240 270 27 0 chr5 139422305 139422379 -60207771 + L1ME2 LINE L1 5986 6061 -103 2088 129 7 10 chr5 139425474 139425784 -60204366 + AluSx SINE Alu 1 309 -3 730 208 57 0 chr5 139426372 139426531 -60203619 + MIR SINE MIR 56 223 -39 210 71 0 0 chr5 139426534 139426562 -60203588 + (TTA)n Simple_repeat Simple_repeat 2 29 0 831 239 114 84 chr5 139426858 139427348 -60202802 - MLT1D LTR MaLR 0 505 1 198 71 0 0 chr5 139427471 139427499 -60202651 + (CA)n Simple_repeat Simple_repeat 2 29 0 998 238 118 52 chr5 139428208 139428694 -60201456 - MLT1E3 LTR MaLR -8 616 51 284 339 29 35 chr5 139428800 139428974 -60201176 + MIR3 SINE MIR 31 203 -5 940 287 97 89 chr5 139429898 139430394 -60199756 - L2 LINE L2 -1 3312 2822 2099 143 13 0 chr5 139430394 139430694 -60199456 + AluSx SINE Alu 1 304 -8 940 287 97 89 chr5 139430694 139430715 -60199435 - L2 LINE L2 -491 2822 2803 1055 100 6 17 chr5 139430715 139430895 -60199255 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 940 287 97 89 chr5 139430895 139431183 -60198967 - L2 LINE L2 -510 2803 2469 510 280 185 5 chr5 139432074 139432274 -60197876 + MIR SINE MIR 2 237 -25 4264 144 65 80 chr5 139433055 139433478 -60196672 + L1MA6 LINE L1 5016 5444 -856 593 105 23 0 chr5 139433478 139433564 -60196586 + MLT2A1 LTR ERVL 200 287 -157 4264 144 65 80 chr5 139433564 139434367 -60195783 + L1MA6 LINE L1 5444 6283 -17 1548 98 0 0 chr5 139434392 139434606 -60195544 + L1PA8 LINE L1 5956 6169 -3 296 237 97 21 chr5 139435939 139436032 -60194118 - L2 LINE L2 0 3272 3173 252 259 74 19 chr5 139436183 139436291 -60193859 - L2 LINE L2 -858 2456 2343 635 319 63 0 chr5 139436538 139436776 -60193374 + MIR SINE MIR 5 257 -5 347 394 6 0 chr5 139436900 139437060 -60193090 + MIR SINE MIR 32 192 -70 1030 284 109 21 chr5 139437088 139437141 -60193009 + LTR33 LTR ERVL 5 521 0 1052 289 111 17 chr5 139437141 139437563 -60192587 + LTR33 LTR ERVL 60 521 0 3013 64 12 101 chr5 139437932 139438419 -60191731 + MLT2A1 LTR ERVL 1 444 0 333 276 208 16 chr5 139440424 139440616 -60189534 + MIR SINE MIR 20 248 -14 805 255 64 8 chr5 139441140 139441375 -60188775 + MIR SINE MIR 15 262 0 291 241 0 0 chr5 139441421 139441504 -60188646 + (TATATG)n Simple_repeat Simple_repeat 2 84 0 507 323 71 11 chr5 139442099 139442365 -60187785 + MER102b DNA MER1_type 60 341 0 196 194 0 30 chr5 139442414 139442481 -60187669 + CT-rich Low_complexity Low_complexity 3 67 0 216 253 13 89 chr5 139444358 139444437 -60185713 + L2 LINE L2 3200 3272 0 489 86 0 0 chr5 139444960 139445030 -60185120 + Alu SINE Alu 237 306 -6 1207 95 84 6 chr5 139445415 139445594 -60184556 + MER30 DNA MER1_type 38 230 0 21 0 0 0 chr5 139447463 139447484 -60182666 + AT_rich Low_complexity Low_complexity 1 21 0 518 287 30 12 chr5 139447667 139447831 -60182319 - MIR SINE MIR 0 262 96 23 0 0 0 chr5 139447893 139447916 -60182234 + AT_rich Low_complexity Low_complexity 1 23 0 275 322 90 19 chr5 139448368 139448778 -60181372 + L1ME LINE L1 4724 5162 -984 334 281 104 15 chr5 139448909 139449044 -60181106 + L1ME LINE L1 5285 5431 -735 2275 153 104 14 chr5 139449394 139449982 -60180168 - L1M2 LINE L1 -743 5403 4848 1585 153 43 7 chr5 139450093 139450374 -60179776 - AluJb SINE Alu -20 292 2 237 214 31 20 chr5 139450529 139450627 -60179523 + CT-rich Low_complexity Low_complexity 2 100 0 258 301 103 29 chr5 139450629 139450765 -60179385 - L2 LINE L2 -5 3308 3163 499 169 11 0 chr5 139450843 139450932 -60179218 + MLT1A1 LTR MaLR 276 365 0 2843 225 87 25 chr5 139450932 139451511 -60178639 + L1ME2 LINE L1 4512 5054 -1110 1935 151 0 0 chr5 139451511 139451818 -60178332 + AluSx SINE Alu 1 307 0 2843 225 87 25 chr5 139451818 139452803 -60177347 + L1ME2 LINE L1 5054 6163 -1 452 290 118 6 chr5 139452812 139452981 -60177169 - L2 LINE L2 -669 2645 2458 773 274 143 72 chr5 139453138 139453598 -60176552 + LTR33A LTR ERVL 23 515 -8 22 0 0 0 chr5 139453718 139453740 -60176410 + AT_rich Low_complexity Low_complexity 1 22 0 739 137 43 0 chr5 139454074 139454213 -60175937 + L1MB4 LINE L1 6036 6180 0 25 0 0 0 chr5 139455182 139455207 -60174943 + AT_rich Low_complexity Low_complexity 1 25 0 509 216 73 134 chr5 139455548 139455780 -60174370 + MER112 DNA MER1_type 34 251 -9 215 263 53 18 chr5 139455800 139455857 -60174293 + MIR SINE MIR 184 242 -20 1930 140 46 35 chr5 139457576 139457947 -60172203 + THE1C LTR MaLR 1 375 0 9462 115 17 71 chr5 139457950 139459617 -60170533 + THE1C-int LTR MaLR 4 1580 0 1244 128 112 117 chr5 139459617 139459993 -60170157 + THE1C LTR MaLR 1 374 -1 445 271 156 0 chr5 139460001 139460193 -60169957 + MIR SINE MIR 30 251 -11 844 308 124 34 chr5 139460641 139461118 -60169032 - MLT1G1 LTR MaLR 0 595 76 1096 201 47 0 chr5 139461204 139461418 -60168732 + MER58A DNA MER1_type 1 224 0 183 80 0 0 chr5 139461454 139461479 -60168671 + (CA)n Simple_repeat Simple_repeat 2 26 0 201 39 0 0 chr5 139461480 139461506 -60168644 + (GA)n Simple_repeat Simple_repeat 2 27 0 1890 183 11 11 chr5 139461509 139461869 -60168281 + MER47A DNA MER2_type 7 366 0 246 32 0 0 chr5 139461880 139461911 -60168239 + (TG)n Simple_repeat Simple_repeat 1 31 0 2327 119 0 0 chr5 139462625 139462937 -60167213 + AluSx SINE Alu 1 312 0 220 299 0 15 chr5 139462983 139463050 -60167100 - MER5A DNA MER1_type -80 109 44 3820 166 53 71 chr5 139463729 139464063 -60166087 + L1PB4 LINE L1 4328 4667 -1489 216 0 0 0 chr5 139464063 139464087 -60166063 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3820 166 53 71 chr5 139464087 139465036 -60165114 + L1PB4 LINE L1 4667 5606 -550 2146 109 3 7 chr5 139465036 139465330 -60164820 + AluY SINE Alu 3 295 -16 3820 166 53 71 chr5 139465330 139465656 -60164494 + L1PB4 LINE L1 5606 5936 -220 7340 42 0 1 chr5 139465656 139467289 -60162861 + L1PA5 LINE L1 4523 6149 -5 996 218 13 18 chr5 139467289 139467516 -60162634 + L1PB4 LINE L1 5925 6152 -4 185 226 19 0 chr5 139467692 139467745 -60162405 + (TA)n Simple_repeat Simple_repeat 1 54 0 797 303 84 21 chr5 139467938 139468336 -60161814 + MLT1H LTR MaLR 70 505 -90 2150 133 0 9 chr5 139468769 139469084 -60161066 - AluSx SINE Alu 0 312 1 189 410 60 0 chr5 139469395 139469495 -60160655 - MIR SINE MIR -73 135 30 24 0 0 0 chr5 139470075 139470099 -60160051 + AT_rich Low_complexity Low_complexity 1 24 0 2162 125 13 0 chr5 139471210 139471514 -60158636 + AluJb SINE Alu 3 310 -2 180 0 0 0 chr5 139472710 139472730 -60157420 + (T)n Simple_repeat Simple_repeat 1 20 0 242 29 29 0 chr5 139473341 139473376 -60156774 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 414 282 40 0 chr5 139474441 139474565 -60155585 - MER94 DNA DNA -5 129 1 234 266 147 56 chr5 139474618 139474761 -60155389 - L2 LINE L2 0 3313 3158 22 35 0 0 chr5 139475223 139475252 -60154898 + AT_rich Low_complexity Low_complexity 1 29 0 613 75 0 0 chr5 139475300 139475380 -60154770 + MADE1 DNA Mariner 1 80 0 1650 191 17 14 chr5 139476172 139476465 -60153685 - AluJb SINE Alu -7 305 12 604 76 0 0 chr5 139476952 139477031 -60153119 - MADE1 DNA Mariner 0 80 2 434 248 118 12 chr5 139479139 139479300 -60150850 + LTR33 LTR ERVL 1 178 -343 359 291 67 17 chr5 139479375 139479554 -60150596 + LTR33 LTR ERVL 328 515 -6 830 208 60 0 chr5 139482138 139482306 -60147844 + MER45A DNA AcHobo 1 178 0 378 336 18 0 chr5 139482621 139482734 -60147416 + MIR SINE MIR 40 154 -108 428 312 4 78 chr5 139484048 139484282 -60145868 - MIR SINE MIR -48 214 6 199 277 64 53 chr5 139484962 139485056 -60145094 + L2 LINE L2 3143 3237 -35 599 249 71 18 chr5 139486762 139486931 -60143219 - MER5B DNA MER1_type 0 178 1 398 69 17 0 chr5 139487252 139487310 -60142840 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 32 26 0 0 chr5 139487927 139487966 -60142184 + AT_rich Low_complexity Low_complexity 1 39 0 997 188 34 183 chr5 139489185 139489722 -60140428 + L1ME2 LINE L1 5679 6135 -29 299 241 43 101 chr5 139489751 139490008 -60140142 + L1MC4 LINE L1 7801 8042 0 21 0 0 0 chr5 139490102 139490123 -60140027 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 139490269 139490290 -60139860 + AT_rich Low_complexity Low_complexity 1 21 0 286 250 9 37 chr5 139492338 139492446 -60137704 + CT-rich Low_complexity Low_complexity 1 105 0 527 343 96 22 chr5 139492854 139493166 -60136984 - L2 LINE L2 -2 3270 2936 237 286 95 0 chr5 139493894 139493957 -60136193 + L2 LINE L2 3162 3230 -42 687 281 53 0 chr5 139494446 139494692 -60135458 - MIR SINE MIR 0 262 4 2615 142 26 0 chr5 139494820 139495237 -60134913 - MSTA LTR MaLR 0 428 1 515 256 56 28 chr5 139495698 139495913 -60134237 + MLT1K LTR MaLR 368 588 0 184 345 0 0 chr5 139497846 139497904 -60132246 - MIR3 SINE MIR -40 168 111 378 296 124 43 chr5 139498138 139498279 -60131871 - MER63A DNA MER1_type -1487 201 40 195 42 0 0 chr5 139498279 139498303 -60131847 + (TTG)n Simple_repeat Simple_repeat 2 25 0 378 296 124 43 chr5 139498303 139498347 -60131803 - MER63A DNA MER1_type -1648 40 1 207 260 0 0 chr5 139498431 139498481 -60131669 - L2 LINE L2 -1 3312 3263 704 286 133 29 chr5 139498713 139499256 -60130894 - L2 LINE L2 -39 3233 2622 2392 147 20 0 chr5 139499630 139500025 -60130125 + MER57A LTR ERV1 1 403 0 586 331 0 6 chr5 139500056 139500225 -60129925 - MER5B DNA MER1_type -3 175 8 329 351 146 0 chr5 139500800 139501005 -60129145 - MIR SINE MIR -25 237 3 180 0 0 0 chr5 139501547 139501567 -60128583 + (TTTTC)n Simple_repeat Simple_repeat 1 20 0 363 279 51 51 chr5 139503557 139503715 -60126435 - MER5B DNA MER1_type -20 158 1 22 0 0 0 chr5 139503781 139503803 -60126347 + AT_rich Low_complexity Low_complexity 1 22 0 1736 178 0 3 chr5 139503810 139504102 -60126048 - AluJb SINE Alu -9 303 13 201 292 15 15 chr5 139504346 139504411 -60125739 + MIR3 SINE MIR 15 79 -129 214 283 96 87 chr5 139505643 139505873 -60124277 - L2 LINE L2 0 3313 3082 2524 47 0 28 chr5 139506328 139506646 -60123504 + AluY SINE Alu 1 309 -2 253 323 176 15 chr5 139507298 139507689 -60122461 - L2 LINE L2 -243 3070 2618 2129 102 7 0 chr5 139508137 139508420 -60121730 - AluSq SINE Alu -28 285 1 223 273 91 30 chr5 139508437 139508536 -60121614 - MER5A DNA MER1_type -83 106 2 201 300 69 69 chr5 139508541 139508774 -60121376 - L2 LINE L2 -1054 2260 2028 342 215 151 11 chr5 139508778 139508871 -60121279 - L2 LINE L2 0 3313 3208 363 358 75 8 chr5 139509834 139510284 -60119866 + L1ME LINE L1 4942 5431 -733 227 193 35 35 chr5 139510284 139510341 -60119809 - MIR SINE MIR -76 186 130 802 284 61 11 chr5 139510442 139510801 -60119349 - L1M4 LINE L1 -1315 4831 4455 2455 60 0 35 chr5 139511483 139511800 -60118350 + AluY SINE Alu 1 306 -5 232 271 0 0 chr5 139512575 139512623 -60117527 + L2 LINE L2 3261 3308 -5 27 0 0 0 chr5 139513251 139513278 -60116872 + AT_rich Low_complexity Low_complexity 1 27 0 1133 245 94 41 chr5 139513548 139513940 -60116210 - MLT1D LTR MaLR -2 503 91 1297 226 104 95 chr5 139515492 139515778 -60114372 + L1MC4a LINE L1 5276 5558 -2250 1256 232 169 43 chr5 139515778 139516334 -60113816 - MLT1E2 LTR MaLR 0 626 1 1297 226 104 95 chr5 139516334 139516688 -60113462 + L1MC4a LINE L1 5558 5922 -1886 1940 144 36 30 chr5 139517596 139517958 -60112192 + THE1B LTR MaLR 1 364 0 11521 101 5 0 chr5 139517958 139519530 -60110620 + THE1B-int LTR MaLR 1 1580 0 1890 148 63 26 chr5 139519530 139519881 -60110269 + THE1B LTR MaLR 1 364 0 294 211 202 0 chr5 139520198 139520312 -60109838 + L1ME4a LINE L1 5982 6118 -3 288 53 0 0 chr5 139520555 139520593 -60109557 + (GA)n Simple_repeat Simple_repeat 1 38 0 227 259 0 0 chr5 139522190 139522244 -60107906 + (CA)n Simple_repeat Simple_repeat 2 55 0 199 366 84 0 chr5 139523092 139523163 -60106987 - L2 LINE L2 -39 3233 3157 5426 163 26 23 chr5 139523780 139525523 -60104627 + L1MA5 LINE L1 4546 6300 0 730 232 22 80 chr5 139526130 139526406 -60103744 - MIR SINE MIR -1 261 2 344 283 19 38 chr5 139526456 139526615 -60103535 + L1M2 LINE L1 160 315 -6534 12869 201 10 42 chr5 139527232 139530946 -60099204 + L1PA15 LINE L1 2324 5994 -171 2036 153 3 0 chr5 139530946 139531254 -60098896 + AluJb SINE Alu 2 310 -2 12869 201 10 42 chr5 139531254 139531419 -60098731 + L1PA15 LINE L1 5994 6163 -2 8295 115 18 18 chr5 139532009 139533309 -60096841 + HSMAR2 DNA Mariner 3 1302 0 21 0 0 0 chr5 139533482 139533503 -60096647 + AT_rich Low_complexity Low_complexity 1 21 0 582 214 0 0 chr5 139533503 139533615 -60096535 - FLAM_C SINE Alu -21 122 11 294 249 102 49 chr5 139533651 139533894 -60096256 - L1ME3A LINE L1 -202 5968 5713 2514 118 8 0 chr5 139534023 139534395 -60095755 + THE1C LTR MaLR 1 375 0 22 35 0 0 chr5 139534547 139534576 -60095574 + AT_rich Low_complexity Low_complexity 1 29 0 484 257 64 21 chr5 139534989 139535176 -60094974 - MLT1K LTR MaLR -8 580 386 452 318 23 0 chr5 139535281 139535410 -60094740 - MLT1K LTR MaLR -360 228 97 24 0 0 0 chr5 139538917 139538941 -60091209 + AT_rich Low_complexity Low_complexity 1 24 0 3233 186 23 13 chr5 139539920 139541001 -60089149 + L1MC3 LINE L1 4639 5403 -743 * 5468 112 42 24 chr5 139540861 139541070 -60089080 + L1PA16 LINE L1 5255 5459 -707 2193 101 7 3 chr5 139541070 139541376 -60088774 - AluSc SINE Alu -2 307 1 5468 112 42 24 chr5 139541376 139541408 -60088742 + L1PA16 LINE L1 5459 5489 -677 216 0 0 0 chr5 139541408 139541432 -60088718 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5468 112 42 24 chr5 139541432 139542083 -60088067 + L1PA16 LINE L1 5489 6165 -1 4055 181 60 38 chr5 139542079 139543029 -60087121 + L1MC3 LINE L1 6808 7778 -7 * 270 0 0 0 chr5 139543709 139543739 -60086411 + (TA)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr5 139544092 139544112 -60086038 + (CAA)n Simple_repeat Simple_repeat 2 21 0 590 293 122 30 chr5 139545259 139545823 -60084327 + L2 LINE L2 2677 3292 -21 503 43 14 0 chr5 139545912 139545982 -60084168 + (CA)n Simple_repeat Simple_repeat 1 71 0 5783 212 71 16 chr5 139546566 139548006 -60082144 + MER45R DNA AcHobo 4 1578 -3 517 221 21 0 chr5 139548061 139548156 -60081994 + MER20 DNA MER1_type 99 195 -24 226 152 0 22 chr5 139550439 139550451 -60079699 + (CA)n Simple_repeat Simple_repeat 2 13 -33 3315 151 6 7 chr5 139550451 139550994 -60079156 - MER34 LTR ERV1 0 542 1 226 152 0 22 chr5 139550994 139551027 -60079123 + (CA)n Simple_repeat Simple_repeat 13 46 0 209 138 17 52 chr5 139551296 139551354 -60078796 + (TA)n Simple_repeat Simple_repeat 2 57 0 275 148 76 2 chr5 139551391 139551463 -60078687 - L1M2 LINE L1 -322 5849 5775 216 134 34 76 chr5 139551463 139551582 -60078568 + (TA)n Simple_repeat Simple_repeat 2 115 0 491 262 58 26 chr5 139551865 139552056 -60078094 + MER117 DNA MER1_type 1 197 0 3054 164 31 0 chr5 139552465 139553009 -60077141 - L1MB2 LINE L1 -117 6054 5494 1345 86 0 11 chr5 139553018 139553192 -60076958 - AluSg1 SINE Alu -137 172 1 9865 210 26 21 chr5 139553192 139555793 -60074357 - L1MB2 LINE L1 -684 5487 2879 1994 159 0 0 chr5 139556742 139557044 -60073106 + AluSx SINE Alu 1 302 -10 1316 277 75 46 chr5 139557051 139558111 -60072039 + L1ME LINE L1 3740 4830 -1316 1203 264 115 2 chr5 139558164 139558580 -60071570 + MER110A LTR ERV1 1 463 -5 660 263 87 42 chr5 139558663 139559383 -60070767 + L1ME LINE L1 4881 5631 -539 408 219 92 50 chr5 139560876 139560995 -60069155 - MIR3 SINE MIR -2 206 83 23 54 0 0 chr5 139561078 139561115 -60069035 + AT_rich Low_complexity Low_complexity 1 37 0 242 330 18 9 chr5 139562736 139562845 -60067305 + MIR SINE MIR 52 161 -101 2014 138 23 74 chr5 139563032 139563424 -60066726 - MLT1B LTR MaLR -18 372 1 227 310 53 18 chr5 139563561 139563674 -60066476 + MLT1K LTR MaLR 438 554 -34 6950 62 7 0 chr5 139564588 139565893 -60064257 - L1PA7 LINE L1 -2 6152 4844 248 271 85 25 chr5 139567043 139567161 -60062989 - MER33 DNA MER1_type -10 314 190 924 165 44 0 chr5 139567210 139567392 -60062758 - MER33 DNA MER1_type -132 192 3 1454 229 97 31 chr5 139567621 139567761 -60062389 - MER110A LTR ERV1 0 468 339 2303 107 62 0 chr5 139567761 139568116 -60062034 - MER51B LTR ERV1 0 377 1 1454 229 97 31 chr5 139568116 139568439 -60061711 - MER110A LTR ERV1 -129 339 3 2327 96 20 0 chr5 139568656 139568957 -60061193 + AluSg SINE Alu 1 307 -3 463 327 126 56 chr5 139569027 139569489 -60060661 - L2 LINE L2 -14 3299 2806 523 246 8 16 chr5 139569522 139569644 -60060506 + MER45A DNA AcHobo 58 178 0 192 97 0 0 chr5 139569693 139569724 -60060426 + (T)n Simple_repeat Simple_repeat 1 31 0 657 277 40 5 chr5 139569907 139570109 -60060041 - MLT1J LTR MaLR -302 209 1 258 224 0 30 chr5 139570163 139570230 -60059920 - L2 LINE L2 -3 3310 3246 239 67 0 0 chr5 139572214 139572244 -60057906 + (A)n Simple_repeat Simple_repeat 1 30 0 572 145 4 185 chr5 139574428 139574655 -60055495 + MER53 DNA DNA 2 187 -2 183 80 0 0 chr5 139574714 139574739 -60055411 + (CA)n Simple_repeat Simple_repeat 1 25 0 369 0 0 0 chr5 139576223 139576264 -60053886 + (TG)n Simple_repeat Simple_repeat 1 41 0 * 537 64 0 0 chr5 139576263 139576341 -60053809 + (GA)n Simple_repeat Simple_repeat 1 78 0 221 333 138 24 chr5 139580131 139580377 -60049773 + L2 LINE L2 3040 3313 0 207 69 0 0 chr5 139580976 139581005 -60049145 + (GGGA)n Simple_repeat Simple_repeat 2 30 0 235 322 0 0 chr5 139582800 139582859 -60047291 + L2 LINE L2 3151 3209 -63 236 277 0 0 chr5 139583012 139583059 -60047091 + L2 LINE L2 3258 3304 -9 10775 164 21 10 chr5 139585883 139586393 -60043757 - L1M1 LINE L1 -5268 2297 1794 237 33 0 0 chr5 139586393 139586423 -60043727 + (TC)n Simple_repeat Simple_repeat 1 30 0 10775 164 21 10 chr5 139586423 139587711 -60042439 - L1M1 LINE L1 -5771 1794 480 654 217 72 0 chr5 139587714 139587852 -60042298 - L1M1 LINE L1 -7301 264 117 330 188 17 94 chr5 139587898 139588015 -60042135 - L1M1 LINE L1 -7442 123 16 1750 223 126 26 chr5 139588259 139588726 -60041424 - LTR40a LTR ERVL 0 519 6 625 239 98 30 chr5 139589310 139589525 -60040625 + MIR SINE MIR 2 227 -35 24 0 0 0 chr5 139589881 139589905 -60040245 + AT_rich Low_complexity Low_complexity 1 24 0 184 244 0 122 chr5 139590519 139590556 -60039594 + MIR SINE MIR 191 214 -48 1684 192 0 7 chr5 139590556 139590853 -60039297 + AluJo SINE Alu 1 295 -17 184 244 0 122 chr5 139590853 139590897 -60039253 + MIR SINE MIR 214 262 0 1061 211 14 0 chr5 139591489 139591702 -60038448 + MER58A DNA MER1_type 9 224 0 209 286 57 29 chr5 139591817 139591922 -60038228 - MIR SINE MIR -37 225 118 450 231 37 60 chr5 139591947 139592081 -60038069 + L2 LINE L2 3180 3310 -3 229 229 0 0 chr5 139592097 139592145 -60038005 + (TAAA)n Simple_repeat Simple_repeat 3 50 0 1950 100 0 0 chr5 139592990 139593241 -60036909 - AluSq SINE Alu -7 306 56 2472 163 36 5 chr5 139593466 139593877 -60036273 - MSTB LTR MaLR 0 426 3 846 192 141 15 chr5 139594019 139594217 -60035933 - MER58A DNA MER1_type 0 224 2 207 239 0 0 chr5 139594772 139594818 -60035332 - L2 LINE L2 -7 3306 3261 180 289 0 0 chr5 139594984 139595029 -60035121 + L2 LINE L2 3263 3307 -6 214 322 203 25 chr5 139595073 139595183 -60034967 + L2 LINE L2 2400 2489 -825 1888 205 40 15 chr5 139595183 139595545 -60034605 + MLT2D LTR ERVL 1 375 -39 324 83 0 0 chr5 139595545 139595593 -60034557 + (CA)n Simple_repeat Simple_repeat 1 48 0 1888 205 40 15 chr5 139595593 139595630 -60034520 + MLT2D LTR ERVL 375 410 -4 214 322 203 25 chr5 139595630 139595755 -60034395 + L2 LINE L2 2489 2677 -637 273 292 192 23 chr5 139596628 139596758 -60033392 - L2 LINE L2 0 3272 3121 243 0 0 0 chr5 139596836 139596863 -60033287 + (A)n Simple_repeat Simple_repeat 1 27 0 255 31 0 0 chr5 139596869 139596901 -60033249 + (TG)n Simple_repeat Simple_repeat 1 32 0 1316 189 0 76 chr5 139596901 139597203 -60032947 - AluSx SINE Alu -33 279 1 625 241 108 0 chr5 139597265 139597431 -60032719 + MER5A DNA MER1_type 4 187 -2 229 360 69 36 chr5 139597583 139597889 -60032261 - L2 LINE L2 -545 2769 2454 264 281 20 0 chr5 139598917 139599006 -60031144 + MIR SINE MIR 23 115 -93 23 54 0 0 chr5 139599955 139599992 -60030158 + AT_rich Low_complexity Low_complexity 1 37 0 300 305 57 21 chr5 139601684 139601825 -60028325 + MIR3 SINE MIR 54 199 -9 406 343 58 10 chr5 139602126 139602418 -60027732 - L1MC4 LINE L1 -138 7904 7599 634 204 36 100 chr5 139602423 139602643 -60027507 + MER58C DNA MER1_type 10 215 0 1757 255 73 41 chr5 139602657 139603432 -60026718 - L1MC4 LINE L1 -455 7587 6838 207 0 0 0 chr5 139603432 139603455 -60026695 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2077 110 3 13 chr5 139603457 139603756 -60026394 - AluSx SINE Alu -16 296 1 1757 255 73 41 chr5 139603756 139603829 -60026321 - L1MC4 LINE L1 -1204 6838 6709 254 314 22 7 chr5 139603951 139604088 -60026062 - L1MC4 LINE L1 -1443 6599 6461 3535 213 28 43 chr5 139604440 139605565 -60024585 - L1M4 LINE L1 -1353 4793 3685 26278 130 16 59 chr5 139605594 139612056 -60018094 - L1PA8 LINE L1 -1 6171 1 1655 254 26 2 chr5 139612059 139612598 -60017552 - L1M4 LINE L1 -2453 3693 3142 270 73 0 0 chr5 139613108 139613149 -60017001 + (TG)n Simple_repeat Simple_repeat 2 42 0 2038 131 24 0 chr5 139613149 139613429 -60016721 - AluSq SINE Alu -23 290 1 429 111 44 11 chr5 139613808 139613898 -60016252 + GA-rich Low_complexity Low_complexity 3 95 0 202 361 19 51 chr5 139616127 139616285 -60013865 - L2 LINE L2 -242 3030 2878 2144 123 25 30 chr5 139616777 139617143 -60013007 + THE1B LTR MaLR 1 364 0 2267 129 0 0 chr5 139619865 139620176 -60009974 + AluSx SINE Alu 1 311 -1 305 229 29 0 chr5 139620305 139620375 -60009775 + MLT1K LTR MaLR 509 580 -8 239 321 54 27 chr5 139621203 139621315 -60008835 + MLT1L LTR MaLR 151 265 -350 215 236 73 0 chr5 139623924 139623979 -60006171 + MIR3 SINE MIR 131 189 -19 23 0 0 0 chr5 139624297 139624320 -60005830 + AT_rich Low_complexity Low_complexity 1 23 0 376 269 200 0 chr5 139624500 139624660 -60005490 - MIR SINE MIR -2 260 69 669 242 31 41 chr5 139624667 139624861 -60005289 - MLT1F1 LTR MaLR -16 551 360 264 250 13 0 chr5 139624890 139624966 -60005184 - MIR SINE MIR -177 85 9 990 124 40 34 chr5 139625222 139625399 -60004751 - FRAM SINE Alu 0 176 1 275 283 144 43 chr5 139625950 139626437 -60003713 + L1ME4a LINE L1 5352 5887 -1921 187 319 43 87 chr5 139627323 139627461 -60002689 + L2 LINE L2 3133 3264 -8 203 343 98 10 chr5 139627647 139627749 -60002401 + L2 LINE L2 3154 3264 -8 290 326 157 6 chr5 139627774 139627946 -60002204 + MIR SINE MIR 28 225 -37 957 219 37 123 chr5 139629111 139629622 -60000528 - MLT1C LTR MaLR 0 467 1 425 247 205 22 chr5 139629622 139629980 -60000170 - L1ME3A LINE L1 -40 6130 5696 473 250 92 0 chr5 139630189 139630309 -59999841 - L1ME3A LINE L1 -482 5688 5558 705 187 87 18 chr5 139631777 139632002 -59998148 + MSTC LTR MaLR 1 260 -136 392 344 60 73 chr5 139632816 139633269 -59996881 + L2 LINE L2 2826 3272 0 2062 53 19 26 chr5 139633520 139633785 -59996365 + AluY SINE Alu 43 305 -6 258 125 0 0 chr5 139634758 139634806 -59995344 + (TA)n Simple_repeat Simple_repeat 2 49 0 364 222 79 64 chr5 139634806 139635009 -59995141 - LTR37A LTR ERV1 -220 206 1 808 263 130 21 chr5 139635282 139635620 -59994530 + L1ME3A LINE L1 5791 6165 -5 239 209 75 0 chr5 139635711 139635778 -59994372 + L1ME4a LINE L1 5990 6061 -60 892 195 9 83 chr5 139635878 139636150 -59994000 - MLT2B1 LTR ERVL -47 499 267 573 252 11 23 chr5 139636130 139636346 -59993804 - MLT2B3 LTR ERVL -123 431 267 * 1308 208 87 55 chr5 139636326 139636845 -59993305 - MLT2B1 LTR ERVL -120 434 1 2274 86 17 3 chr5 139637522 139637813 -59992337 + AluSc SINE Alu 1 295 -14 2104 101 40 3 chr5 139637848 139638145 -59992005 + AluSq SINE Alu 1 308 -5 187 362 14 57 chr5 139638877 139639018 -59991132 + MIR SINE MIR 9 143 -119 308 282 188 13 chr5 139639647 139639723 -59990427 + MIR SINE MIR 2 63 -199 843 255 16 0 chr5 139639723 139639907 -59990243 - MER5A DNA MER1_type 0 189 3 308 282 188 13 chr5 139639907 139639979 -59990171 + MIR SINE MIR 63 176 -86 815 290 110 24 chr5 139640411 139640794 -59989356 + MLT1L LTR MaLR 200 615 0 298 363 25 19 chr5 139640852 139641012 -59989138 + MIR3 SINE MIR 48 208 0 27 0 0 0 chr5 139641635 139641662 -59988488 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr5 139641919 139641944 -59988206 + AT_rich Low_complexity Low_complexity 1 25 0 630 166 0 0 chr5 139641944 139642119 -59988031 + (TA)n Simple_repeat Simple_repeat 1 175 0 322 229 96 0 chr5 139642121 139642204 -59987946 - L1MC4 LINE L1 -1339 6703 6613 479 163 8 0 chr5 139642204 139642327 -59987823 + (TA)n Simple_repeat Simple_repeat 1 124 0 260 170 11 85 chr5 139642353 139642447 -59987703 + LTR37A LTR ERV1 340 426 0 186 274 16 65 chr5 139642908 139642970 -59987180 + L2 LINE L2 3255 3313 0 1208 175 27 117 chr5 139642980 139643381 -59986769 + MLT1A1 LTR MaLR 1 365 0 21 36 0 0 chr5 139643520 139643548 -59986602 + AT_rich Low_complexity Low_complexity 1 28 0 882 208 79 46 chr5 139644292 139644508 -59985642 - MER58A DNA MER1_type -1 223 1 546 77 13 0 chr5 139645089 139645167 -59984983 - MADE1 DNA Mariner -1 79 1 301 224 82 0 chr5 139646503 139646601 -59983549 - L1MC5 LINE L1 -49 7912 7807 24 0 0 0 chr5 139647616 139647640 -59982510 + AT_rich Low_complexity Low_complexity 1 24 0 1966 147 13 3 chr5 139648148 139648448 -59981702 - AluSx SINE Alu -9 303 1 435 325 53 0 chr5 139648453 139648604 -59981546 + MIR SINE MIR 101 259 -3 327 335 33 16 chr5 139650149 139650331 -59979819 - L1P LINE L1 -1956 4190 4006 1299 113 10 0 chr5 139650913 139651116 -59979034 + L1PA14 LINE L1 5954 6158 -3 623 297 16 16 chr5 139651218 139651403 -59978747 + L2 LINE L2 3129 3313 0 195 235 0 0 chr5 139651735 139651786 -59978364 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 726 244 81 0 chr5 139652771 139652943 -59977207 + MER5A DNA MER1_type 1 186 -3 1000 186 33 0 chr5 139652982 139653165 -59976985 - MER5A DNA MER1_type 0 189 1 1057 277 107 43 chr5 139654705 139655171 -59974979 + MLT1K LTR MaLR 87 582 -6 202 282 0 59 chr5 139655182 139655267 -59974883 - MIR SINE MIR 0 262 183 28 91 0 0 chr5 139655664 139655741 -59974409 + AT_rich Low_complexity Low_complexity 1 77 0 217 256 0 58 chr5 139656431 139656517 -59973633 + A-rich Low_complexity Low_complexity 2 82 0 1997 102 0 0 chr5 139756589 139756854 -59873296 - AluY SINE Alu -46 265 1 302 211 71 5 chr5 139756854 139756921 -59873229 - L1ME3A LINE L1 -50 6120 6059 1804 122 0 19 chr5 139756921 139757184 -59872966 + AluSx SINE Alu 44 301 -11 302 211 71 5 chr5 139757184 139757250 -59872900 - L1ME3A LINE L1 -111 6059 5725 547 285 67 26 chr5 139757250 139757517 -59872633 - L1MB2 LINE L1 -237 5934 5657 568 181 147 0 chr5 139758006 139758122 -59872028 - AluJo SINE Alu -178 134 2 356 308 44 53 chr5 139758290 139758517 -59871633 + L2 LINE L2 2312 2536 -778 22 0 0 0 chr5 139759204 139759226 -59870924 + AT_rich Low_complexity Low_complexity 1 22 0 228 362 21 35 chr5 139759430 139759571 -59870579 - MIR SINE MIR -77 185 47 484 227 101 0 chr5 139759698 139759817 -59870333 + L2 LINE L2 3168 3298 -15 4333 140 246 85 chr5 139760084 139761418 -59868732 + pTR5 LTR ERV1 276 2295 -143 748 236 24 0 chr5 139762004 139762169 -59867981 - MER5A DNA MER1_type -14 175 7 591 189 33 72 chr5 139762938 139763091 -59867059 + MER69 DNA AcHobo 1 147 -1079 392 198 28 47 chr5 139763058 139763164 -59866986 + MER69 DNA AcHobo 2422 2525 -1 * 324 221 16 82 chr5 139765040 139765162 -59864988 + L1ME4a LINE L1 5935 6048 -73 244 65 0 0 chr5 139765429 139765460 -59864690 + Alu SINE Alu 34 64 -239 24 53 0 0 chr5 139765694 139765732 -59864418 + AT_rich Low_complexity Low_complexity 1 38 0 2497 93 26 59 chr5 139765732 139765922 -59864228 - L1PB1 LINE L1 -2 6149 5977 2052 132 24 7 chr5 139765922 139766218 -59863932 - AluSx SINE Alu -11 301 1 2497 93 26 59 chr5 139766218 139766414 -59863736 - L1PB1 LINE L1 -174 5977 5776 194 87 87 22 chr5 139766417 139766509 -59863641 + (TA)n Simple_repeat Simple_repeat 2 99 0 892 106 0 8 chr5 139766673 139766805 -59863345 - AluSg1 SINE Alu -178 131 1 258 32 0 0 chr5 139767068 139767099 -59863051 + (TG)n Simple_repeat Simple_repeat 2 32 0 701 173 39 13 chr5 139767642 139767798 -59862352 + MIR SINE MIR 103 262 0 194 330 30 40 chr5 139768267 139768367 -59861783 - MIR3 SINE MIR -108 100 2 387 288 43 118 chr5 139769393 139769743 -59860407 + ERVL LTR ERVL 3151 3350 -1646 1584 322 84 23 chr5 139769764 139769939 -59860211 + ERVL LTR ERVL 3855 4018 -1467 1511 188 10 36 chr5 139769939 139770074 -59860076 + AluJo SINE Alu 1 138 -174 2203 81 0 65 chr5 139770074 139770396 -59859754 + AluSq SINE Alu 1 301 -12 1511 188 10 36 chr5 139770396 139770569 -59859581 + AluJo SINE Alu 138 301 -11 1584 322 84 23 chr5 139770569 139771457 -59858693 + ERVL LTR ERVL 4018 4983 -502 340 191 85 0 chr5 139771570 139771642 -59858508 + AluJ/FLAM SINE Alu 23 92 -210 254 274 47 9 chr5 139771659 139771765 -59858385 + ERVL LTR ERVL 5214 5323 -441 547 308 150 18 chr5 139771943 139772336 -59857814 + LTR16A LTR ERVL 1 445 -5 281 304 0 0 chr5 139772537 139772606 -59857544 + MLT1E LTR MaLR 19 87 -506 447 361 40 13 chr5 139772661 139772888 -59857262 - MLT1J LTR MaLR -170 341 109 27 49 0 0 chr5 139773128 139773169 -59856981 + AT_rich Low_complexity Low_complexity 1 41 0 726 250 74 43 chr5 139773876 139774365 -59855785 + MER34 LTR ERV1 1 539 -3 1873 139 23 13 chr5 139774416 139774717 -59855433 + AluSx SINE Alu 1 304 -8 1816 159 57 27 chr5 139774865 139775198 -59854952 - MER61A LTR ERV1 0 343 1 2261 120 20 6 chr5 139775198 139775970 -59854180 - MER61A-int LTR ERV1 0 5217 4345 2731 85 130 8 chr5 139775970 139776369 -59853781 + LTR7 LTR ERV1 1 448 -2 1749 107 0 0 chr5 139776372 139776625 -59853525 + HERVH LTR ERV1 1 253 -7460 816 164 7 7 chr5 139776740 139776880 -59853270 + HERVH LTR ERV1 255 394 -7319 494 189 77 107 chr5 139777021 139777387 -59852763 + pTR5 LTR ERV1 979 1333 -1105 3687 128 217 23 chr5 139777414 139778102 -59852048 + LTR12 LTR ERV1 5 825 -1 1815 192 80 22 chr5 139778446 139778810 -59851340 - MLT1B LTR MaLR -3 387 3 562 216 176 20 chr5 139778839 139778987 -59851163 + MIR SINE MIR 38 208 -54 220 318 186 27 chr5 139779301 139779521 -59850629 + L2 LINE L2 3035 3289 -24 1038 40 8 0 chr5 139780459 139780584 -59849566 - AluSq SINE Alu -3 310 185 697 59 0 0 chr5 139780584 139780669 -59849481 - AluSq SINE Alu -226 86 2 2246 100 0 7 chr5 139781564 139781863 -59848287 + AluSc SINE Alu 1 297 -12 3082 111 117 35 chr5 139782036 139782522 -59847628 + MER1A DNA MER1_type 2 527 0 225 176 40 0 chr5 139782745 139782819 -59847331 + (TATATG)n Simple_repeat Simple_repeat 2 78 0 52 30 0 0 chr5 139782819 139782885 -59847265 + AT_rich Low_complexity Low_complexity 1 66 0 578 82 68 0 chr5 139782889 139783035 -59847115 + (TA)n Simple_repeat Simple_repeat 2 157 0 967 201 158 45 chr5 139783145 139783488 -59846662 + MER101B LTR ERV1 172 447 -27 260 277 54 45 chr5 139783945 139784057 -59846093 + MLT1J LTR MaLR 61 173 -338 540 0 0 0 chr5 139784248 139784308 -59845842 + (CA)n Simple_repeat Simple_repeat 2 61 0 555 291 114 14 chr5 139784780 139785167 -59844983 - MLT1J LTR MaLR -32 479 26 4185 119 96 54 chr5 139785215 139785969 -59844181 - LTR1 LTR ERV1 0 785 1 357 294 56 28 chr5 139786628 139786793 -59843357 + L1MC4a LINE L1 5651 5711 -410 16714 91 8 5 chr5 139786793 139789802 -59840348 + L1PA7 LINE L1 3121 6154 0 357 294 56 28 chr5 139789802 139789906 -59840244 + L1MC4a LINE L1 5711 5811 -310 582 116 168 0 chr5 139790003 139790098 -59840052 + Tigger5 DNA MER2_type 2142 2252 -71 280 195 0 0 chr5 139790100 139790141 -59840009 + Alu SINE Alu 1 41 -267 1175 249 35 59 chr5 139790374 139790799 -59839351 - MLT1C LTR MaLR 0 467 53 970 127 115 6 chr5 139790829 139790994 -59839156 - L1MB1 LINE L1 0 6168 5986 224 350 38 38 chr5 139793362 139793519 -59836631 - MIR SINE MIR -55 207 51 219 111 0 56 chr5 139793991 139794027 -59836123 - L2 LINE L2 -39 3233 3200 332 269 120 0 chr5 139794403 139794511 -59835639 - MIR SINE MIR -76 186 66 2117 110 0 20 chr5 139794599 139794899 -59835251 - AluSx SINE Alu -10 302 9 1661 136 29 4 chr5 139797270 139797543 -59832607 + AluJb SINE Alu 1 280 -32 191 30 0 61 chr5 139797547 139797580 -59832570 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2440 58 0 10 chr5 139797775 139798069 -59832081 - AluY SINE Alu -20 291 1 230 122 0 41 chr5 139799706 139799755 -59830395 + (TTCCC)n Simple_repeat Simple_repeat 3 49 0 2594 198 154 64 chr5 139799793 139800539 -59829611 + MER21B LTR ERV1 5 818 -45 687 130 10 0 chr5 139800539 139800639 -59829511 + MER101B LTR ERV1 1 101 -469 942 280 146 31 chr5 139800743 139800890 -59829260 + L2 LINE L2 2460 2589 -724 2960 161 61 23 chr5 139800890 139801493 -59828657 - L1MB8 LINE L1 0 6178 5553 942 280 146 31 chr5 139801493 139801888 -59828262 + L2 LINE L2 2589 2937 -376 1815 149 116 9 chr5 139801888 139802216 -59827934 + MLT1A1 LTR MaLR 1 363 -2 942 280 146 31 chr5 139802216 139802432 -59827718 + L2 LINE L2 2937 3313 0 203 284 42 11 chr5 139802442 139802537 -59827613 - L2 LINE L2 -1446 1868 1771 395 167 26 0 chr5 139802570 139802648 -59827502 + L2 LINE L2 1487 1566 -1748 297 242 72 93 chr5 139802656 139802850 -59827300 - LTR48B LTR ERV1 -11 633 444 371 263 21 0 chr5 139803290 139803385 -59826765 + L2 LINE L2 1580 1676 -1638 2285 96 0 0 chr5 139803414 139803705 -59826445 - AluSg SINE Alu -19 291 1 1837 182 43 6 chr5 139804146 139804475 -59825675 - MER7A DNA MER2_type -5 341 3 210 71 0 0 chr5 139804476 139804504 -59825646 + (TA)n Simple_repeat Simple_repeat 2 29 0 1546 183 14 7 chr5 139804600 139804885 -59825265 + AluJb SINE Alu 2 288 -24 945 118 26 0 chr5 139804898 139805051 -59825099 - Tigger1 DNA MER2_type -62 2356 2200 938 135 0 14 chr5 139805047 139805188 -59824962 - Tigger1 DNA MER2_type -2279 139 1 * 2380 92 0 0 chr5 139805880 139806183 -59823967 - AluY SINE Alu -8 303 1 1555 262 33 120 chr5 139806313 139806811 -59823339 + MER21B LTR ERV1 24 435 -428 2087 128 10 0 chr5 139806811 139807108 -59823042 - AluSx SINE Alu -11 301 2 1555 262 33 120 chr5 139807108 139807366 -59822784 + MER21B LTR ERV1 435 714 -149 702 311 110 24 chr5 139807535 139807956 -59822194 - L1ME4a LINE L1 -44 6077 5693 2177 123 0 3 chr5 139807956 139808266 -59821884 + AluSx SINE Alu 2 310 -2 702 311 110 24 chr5 139808266 139808407 -59821743 - L1ME4a LINE L1 -428 5693 5565 2405 77 3 0 chr5 139808407 139808705 -59821445 + AluY SINE Alu 1 299 -12 702 311 110 24 chr5 139808705 139808807 -59821343 - L1ME4a LINE L1 -556 5565 5355 442 340 78 0 chr5 139809069 139809301 -59820849 + LTR16A LTR ERVL 1 250 -200 2829 302 21 40 chr5 139809322 139809675 -59820475 + HERV16 LTR ERVL 1682 2040 -2956 1609 185 44 13 chr5 139809675 139809973 -59820177 + AluJb SINE Alu 1 307 -5 2829 302 21 40 chr5 139809973 139810251 -59819899 + HERV16 LTR ERVL 2040 2322 -2674 2086 117 44 0 chr5 139810251 139810549 -59819601 - AluSq SINE Alu -2 311 1 2829 302 21 40 chr5 139810549 139810792 -59819358 + HERV16 LTR ERVL 2322 2534 -2462 1909 142 34 7 chr5 139810792 139810967 -59819183 - AluSx SINE Alu -8 304 116 216 0 0 0 chr5 139810967 139810991 -59819159 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1909 142 34 7 chr5 139810991 139811111 -59819039 - AluSx SINE Alu -196 116 1 2829 302 21 40 chr5 139811111 139811321 -59818829 + HERV16 LTR ERVL 2534 2747 -2249 488 329 29 0 chr5 139811349 139811519 -59818631 + HERV16 LTR ERVL 3058 3232 -2532 2377 150 37 21 chr5 139812483 139812917 -59817233 + L1MB4 LINE L1 5646 6086 -94 883 235 37 60 chr5 139812917 139813425 -59816725 - MER39 LTR ERV1 0 644 8 568 154 0 0 chr5 139813433 139813524 -59816626 + L1MB4 LINE L1 6084 6174 -6 999 259 160 32 chr5 139813764 139814238 -59815912 - MER34 LTR ERV1 0 542 8 207 250 0 0 chr5 139814377 139814429 -59815721 + GA-rich Low_complexity Low_complexity 3 54 0 2633 203 140 16 chr5 139814623 139815358 -59814792 - LTR1B LTR ERV1 0 826 1 1855 156 79 73 chr5 139815450 139815511 -59814639 - MER39 LTR ERV1 -4 703 644 2387 134 31 21 chr5 139815511 139815892 -59814258 + L1PA16 LINE L1 5770 6154 -12 1855 156 79 73 chr5 139815892 139815929 -59814221 - MER39 LTR ERV1 -63 644 609 2284 72 3 3 chr5 139815929 139816220 -59813930 + AluY SINE Alu 1 291 -20 1855 156 79 73 chr5 139816220 139816759 -59813391 - MER39 LTR ERV1 -98 609 1 1701 169 10 26 chr5 139817093 139817400 -59812750 - AluJo SINE Alu -10 302 1 1950 144 13 7 chr5 139820062 139820368 -59809782 - AluJb SINE Alu 0 312 5 1961 160 0 13 chr5 139820730 139821043 -59809107 - AluJo SINE Alu 0 312 4 1932 157 58 123 chr5 139821134 139821632 -59808518 + MER31B LTR ERV1 1 466 0 1391 212 61 17 chr5 139821635 139821980 -59808170 - MER93b LTR ERV1 -2 371 12 1519 168 0 19 chr5 139821987 139822249 -59807901 + AluJb SINE Alu 3 259 -53 11194 173 22 18 chr5 139822456 139823557 -59806593 - L1P5 LINE L1 -351 5800 4704 183 42 0 0 chr5 139823557 139823581 -59806569 + (TTG)n Simple_repeat Simple_repeat 2 25 0 267 54 0 0 chr5 139823584 139823621 -59806529 + (TG)n Simple_repeat Simple_repeat 2 38 0 2074 128 0 3 chr5 139823622 139823910 -59806240 - AluSq SINE Alu -26 287 1 11194 173 22 18 chr5 139823910 139825439 -59804711 - L1P5 LINE L1 -1448 4703 3157 194 0 39 0 chr5 139825439 139825465 -59804685 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 11194 173 22 18 chr5 139825465 139825648 -59804502 - L1P5 LINE L1 -2994 3157 2976 353 267 198 9 chr5 139826376 139826492 -59803658 + MER5A DNA MER1_type 41 178 -11 1548 218 3 6 chr5 139826493 139826805 -59803345 + AluJb SINE Alu 2 312 0 1405 228 66 68 chr5 139826852 139827395 -59802755 + MER34 LTR ERV1 1 542 0 468 166 207 76 chr5 139827937 139828082 -59802068 + MER5A DNA MER1_type 20 183 -6 586 175 80 29 chr5 139828093 139828230 -59801920 - MIR SINE MIR -8 254 111 292 277 89 45 chr5 139828241 139828353 -59801797 - L2 LINE L2 -6 3266 3150 1105 264 64 41 chr5 139828438 139828600 -59801550 - MLT1F LTR MaLR -211 331 174 779 169 85 17 chr5 139828600 139828777 -59801373 + MER53 DNA DNA 1 189 0 1105 264 64 41 chr5 139828777 139828928 -59801222 - MLT1F LTR MaLR -368 174 11 2341 96 0 6 chr5 139829231 139829543 -59800607 - AluY SINE Alu -1 310 1 1864 82 47 12 chr5 139830186 139830441 -59799709 + AluSc SINE Alu 44 307 -2 190 175 25 25 chr5 139830519 139830559 -59799591 - MIR SINE MIR -12 250 211 237 311 117 20 chr5 139830561 139830762 -59799388 - MIR SINE MIR -24 238 19 1197 218 93 48 chr5 139831127 139831503 -59798647 + MER63B DNA MER1_type 7 399 -37 1479 68 5 16 chr5 139832692 139832882 -59797268 + AluSq SINE Alu 12 199 -114 429 235 0 10 chr5 139832917 139833015 -59797135 - L1ME1 LINE L1 -5 6161 6065 2188 119 0 3 chr5 139833084 139833379 -59796771 + AluSg SINE Alu 1 294 -16 2885 132 7 0 chr5 139834036 139834453 -59795697 + MSTC LTR MaLR 1 420 -8 464 228 4 0 chr5 139835466 139835579 -59794571 - L1MC4 LINE L1 0 8040 7879 3920 143 49 19 chr5 139836866 139837559 -59792591 - L1MA7 LINE L1 -6 6285 5572 381 200 130 0 chr5 139838734 139838834 -59791316 + MLT1D LTR MaLR 6 118 -349 2423 87 0 3 chr5 139838836 139839145 -59791005 + AluY SINE Alu 1 308 -3 826 68 0 0 chr5 139839145 139839248 -59790902 + AluY SINE Alu 199 301 -10 505 201 181 27 chr5 139839350 139839499 -59790651 + MLT1D LTR MaLR 266 437 -68 243 250 0 0 chr5 139839501 139839553 -59790597 + MIR SINE MIR 156 207 -55 2955 91 3 3 chr5 139839555 139839919 -59790231 - THE1B LTR MaLR 0 364 1 429 259 104 62 chr5 139839939 139840132 -59790018 + MIR SINE MIR 51 251 -11 489 296 63 16 chr5 139841107 139841296 -59788854 + MIR SINE MIR 13 210 -52 392 310 58 11 chr5 139841873 139842047 -59788103 - MLT1L LTR MaLR -17 598 417 293 282 145 30 chr5 139842743 139842874 -59787276 - MER5B DNA MER1_type 0 178 33 770 155 0 78 chr5 139843141 139843283 -59786867 - FLAM_C SINE Alu -2 131 1 14814 106 12 28 chr5 139844394 139846799 -59783351 + HERVH LTR ERV1 382 2995 -4718 889 149 50 0 chr5 139846778 139846939 -59783211 + HERVH LTR ERV1 3140 3308 -4405 * 1565 142 0 19 chr5 139846917 139847178 -59782972 + HERVH LTR ERV1 3492 3747 -3966 7136 112 2 7 chr5 139847183 139848210 -59781940 + HERVH LTR ERV1 3993 5014 -2699 2481 112 46 30 chr5 139848196 139848634 -59781516 + HERVH LTR ERV1 7269 7713 0 * 2048 102 6 23 chr5 139848634 139849038 -59781112 + LTR7 LTR ERV1 1 448 -2 15491 100 32 24 chr5 139849040 139851843 -59778307 - MER61A-int LTR ERV1 -868 6072 1649 1998 198 41 52 chr5 139851919 139852552 -59777598 - MER61A-int LTR ERV1 -4510 707 1 1839 139 65 48 chr5 139852552 139852889 -59777261 - MER61A LTR ERV1 0 343 1 1850 183 18 3 chr5 139853497 139853830 -59776320 + MER44D DNA MER2_type 2 609 0 1578 208 88 20 chr5 139853830 139854170 -59775980 - MLT1A1 LTR MaLR 0 365 1 2056 109 32 0 chr5 139854473 139854757 -59775393 + AluSx SINE Alu 1 293 -19 2335 180 26 12 chr5 139854914 139855337 -59774813 + MER66B LTR ERV1 27 455 -31 2363 73 0 0 chr5 139855510 139855799 -59774351 + AluY SINE Alu 6 294 -17 1222 197 161 62 chr5 139855893 139856176 -59773974 - MLT1B LTR MaLR 0 390 64 2004 130 0 3 chr5 139856176 139856469 -59773681 + AluSg SINE Alu 1 292 -18 1222 197 161 62 chr5 139856469 139856540 -59773610 - MLT1B LTR MaLR -326 64 1 825 144 0 0 chr5 139857015 139857133 -59773017 + AluJb SINE Alu 194 311 -1 2425 68 0 3 chr5 139857308 139857603 -59772547 + AluY SINE Alu 1 294 -17 236 170 75 19 chr5 139857745 139857798 -59772352 - LTR67 LTR ERVL -17 540 485 1806 116 0 8 chr5 139858534 139858784 -59771366 + AluSq SINE Alu 56 303 -10 286 349 28 9 chr5 139859224 139859330 -59770820 + MIR SINE MIR 20 127 -81 1413 201 85 89 chr5 139859367 139860097 -59770053 - L1MC5 LINE L1 -54 7907 7181 276 225 250 20 chr5 139860094 139860243 -59769907 - L1MC5 LINE L1 -924 6884 6709 * 1697 216 120 110 chr5 139860260 139861028 -59769122 - L1MC5 LINE L1 -32 7929 7170 1348 179 15 86 chr5 139861028 139861352 -59768798 + AluJb SINE Alu 1 301 -11 1697 216 120 110 chr5 139861352 139861508 -59768642 - L1MC5 LINE L1 -791 7170 7017 709 204 0 23 chr5 139861508 139861640 -59768510 - FLAM_C SINE Alu -4 129 1 1697 216 120 110 chr5 139861640 139861890 -59768260 - L1MC5 LINE L1 -944 7017 6742 2367 100 0 0 chr5 139862094 139862394 -59767756 - AluSx SINE Alu -12 300 1 526 258 95 80 chr5 139862620 139862946 -59767204 - MLT1I LTR MaLR 0 409 79 23 0 0 0 chr5 139863213 139863236 -59766914 + AT_rich Low_complexity Low_complexity 1 23 0 1670 156 10 26 chr5 139863369 139863676 -59766474 + AluJb SINE Alu 1 302 -10 1998 148 9 102 chr5 139863676 139864096 -59766054 + MER57A LTR ERV1 12 392 -11 742 266 79 77 chr5 139864205 139864311 -59765839 - MLT1C LTR MaLR 0 467 363 879 160 0 0 chr5 139864311 139864442 -59765708 + FLAM_C SINE Alu 1 131 -2 742 266 79 77 chr5 139864442 139864778 -59765372 - MLT1C LTR MaLR -104 363 24 271 279 15 15 chr5 139865990 139866058 -59764092 + MIR SINE MIR 9 76 -186 2324 82 0 3 chr5 139868777 139869068 -59761082 + AluY SINE Alu 1 290 -21 204 97 0 0 chr5 139869177 139869208 -59760942 + (TG)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr5 139869310 139869332 -59760818 + AT_rich Low_complexity Low_complexity 1 22 0 1368 79 0 0 chr5 139869360 139869525 -59760625 + AluSq SINE Alu 50 214 -99 574 132 28 160 chr5 139869545 139869604 -59760546 - MSTC LTR MaLR -303 125 94 1743 178 7 10 chr5 139869604 139869913 -59760237 + AluJo SINE Alu 5 312 0 574 132 28 160 chr5 139869913 139869997 -59760153 - MSTC LTR MaLR -334 94 1 2026 124 10 0 chr5 139870365 139870655 -59759495 - AluSg SINE Alu -17 293 1 2162 107 24 3 chr5 139871193 139871484 -59758666 - AluSq SINE Alu -16 297 1 1845 278 105 24 chr5 139871947 139873108 -59757042 + L2 LINE L2 2033 3313 0 1253 187 0 46 chr5 139873134 139873375 -59756775 + AluJo SINE Alu 1 230 -82 360 242 102 60 chr5 139873391 139873606 -59756544 + HAL1 LINE L1 2278 2501 -6 200 216 0 0 chr5 139877895 139877932 -59752218 + MIR SINE MIR 117 153 -109 186 255 206 29 chr5 139878204 139878306 -59751844 + L2 LINE L2 3138 3257 -15 2201 119 0 0 chr5 139879196 139879498 -59750652 + AluSx SINE Alu 1 302 -10 654 247 41 6 chr5 139879619 139879697 -59750453 - Tigger5 DNA MER2_type 0 2323 2249 1573 143 24 14 chr5 139879697 139879984 -59750166 - AluSx SINE Alu -22 290 1 654 247 41 6 chr5 139879984 139880075 -59750075 - Tigger5 DNA MER2_type -74 2249 2148 1845 210 170 69 chr5 139880265 139880965 -59749185 + LTR41 LTR ERVL 3 773 0 360 207 0 0 chr5 139881439 139881550 -59748600 + (TA)n Simple_repeat Simple_repeat 2 112 0 388 99 28 14 chr5 139881811 139881882 -59748268 + T-rich Low_complexity Low_complexity 3 74 0 2526 67 6 6 chr5 139881888 139882201 -59747949 - AluSp SINE Alu 0 313 1 465 274 204 11 chr5 139885989 139886175 -59743975 - MIR SINE MIR -34 228 7 3987 149 19 18 chr5 139886599 139887355 -59742795 - L1MC1 LINE L1 -404 5929 5173 2206 118 0 0 chr5 139887441 139887738 -59742412 + AluSg SINE Alu 1 297 -13 1578 220 132 67 chr5 139889028 139889537 -59740613 - MLT1F LTR MaLR 0 542 1 225 309 29 0 chr5 139889538 139889606 -59740544 + MER91B DNA MER1_type 6 75 -115 180 305 34 0 chr5 139889842 139889901 -59740249 + L3 LINE CR1 1414 1474 -103 277 338 133 58 chr5 139889905 139890287 -59739863 - L2 LINE L2 -1 3271 2861 525 332 112 45 chr5 139890388 139891138 -59739012 - L2 LINE L2 -601 2713 1914 4232 125 34 70 chr5 139891325 139891519 -59738631 + LTR1 LTR ERV1 1 200 -585 1820 120 0 109 chr5 139891519 139891677 -59738473 + AluSx SINE Alu 1 175 -137 2124 115 0 22 chr5 139891677 139891990 -59738160 + AluSg1 SINE Alu 4 309 0 2461 81 0 0 chr5 139891997 139892306 -59737844 + AluY SINE Alu 1 309 -2 1820 120 0 109 chr5 139892306 139892488 -59737662 + AluSx SINE Alu 181 311 -1 4232 125 34 70 chr5 139892488 139893107 -59737043 + LTR1 LTR ERV1 200 785 0 811 198 40 53 chr5 139895132 139895359 -59734791 - AluJo SINE Alu -3 309 86 199 348 156 7 chr5 139895390 139895525 -59734625 + L2 LINE L2 3113 3267 -5 1018 268 68 59 chr5 139895777 139896218 -59733932 + LTR67 LTR ERVL 113 557 0 1719 175 57 11 chr5 139896538 139896904 -59733246 + LTR37A LTR ERV1 6 388 -38 926 196 79 152 chr5 139897067 139897352 -59732798 - MER34C LTR ERV1 0 585 364 1800 187 59 59 chr5 139897352 139897453 -59732697 + MSTB2 LTR MaLR 1 101 -356 2459 80 3 0 chr5 139897453 139897754 -59732396 + AluSc SINE Alu 1 302 -7 1800 187 59 59 chr5 139897754 139898107 -59732043 + MSTB2 LTR MaLR 100 455 -2 926 196 79 152 chr5 139898107 139898413 -59731737 - MER34C LTR ERV1 -221 364 37 240 150 0 0 chr5 139898414 139898454 -59731696 - MLT1C LTR MaLR -18 449 410 497 279 188 10 chr5 139899266 139899463 -59730687 + MIR SINE MIR 21 252 -10 234 0 0 0 chr5 139900214 139900240 -59729910 + (CA)n Simple_repeat Simple_repeat 1 26 0 198 0 0 0 chr5 139901030 139901052 -59729098 + (T)n Simple_repeat Simple_repeat 1 22 0 1115 156 58 0 chr5 139901992 139902165 -59727985 - MER5A DNA MER1_type -4 185 3 282 276 58 45 chr5 139902463 139902619 -59727531 - MIR SINE MIR -1 261 104 1574 205 68 36 chr5 139903653 139904067 -59726083 + L1MC4 LINE L1 7282 7708 -334 801 171 0 29 chr5 139904072 139904212 -59725938 + FRAM SINE Alu 12 147 -29 898 214 31 5 chr5 139904213 139904428 -59725722 + L1MC4 LINE L1 7585 7712 -96 500 159 62 0 chr5 139904568 139904681 -59725469 + L1MC4 LINE L1 7918 8037 -5 303 28 0 0 chr5 139905223 139905259 -59724891 + (TG)n Simple_repeat Simple_repeat 2 37 0 639 128 40 0 chr5 139906524 139906649 -59723501 + CT-rich Low_complexity Low_complexity 3 132 0 564 77 0 0 chr5 139906749 139906827 -59723323 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1189 191 47 16 chr5 139906833 139907090 -59723060 - AluJo SINE Alu -47 265 1 2590 147 95 32 chr5 139907243 139907600 -59722550 - L1MB4 LINE L1 -8 6172 5768 486 0 0 0 chr5 139907600 139907654 -59722496 + (TA)n Simple_repeat Simple_repeat 2 55 0 2590 147 95 32 chr5 139907654 139907832 -59722318 - L1MB4 LINE L1 -412 5768 5603 1512 132 128 137 chr5 139908078 139908128 -59722022 - MSTB2 LTR MaLR 0 457 408 2252 101 0 3 chr5 139908128 139908426 -59721724 - AluSg SINE Alu -13 297 1 1512 132 128 137 chr5 139908426 139908573 -59721577 - MSTB2 LTR MaLR -49 408 261 2216 105 3 7 chr5 139908573 139908867 -59721283 + AluSp SINE Alu 1 293 -20 1512 132 128 137 chr5 139908867 139909026 -59721124 - MSTB2 LTR MaLR -196 261 102 2356 87 0 26 chr5 139909026 139909337 -59720813 - AluY SINE Alu -7 304 2 1512 132 128 137 chr5 139909337 139909439 -59720711 - MSTB2 LTR MaLR -355 102 1 1466 226 47 0 chr5 139909650 139909946 -59720204 - AluJb SINE Alu -2 310 1 3112 168 24 27 chr5 139910736 139911331 -59718819 - L1MB7 LINE L1 0 6184 5592 180 0 0 0 chr5 139913772 139913792 -59716358 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 2138 112 11 0 chr5 139913796 139914081 -59716069 - AluSx SINE Alu -24 288 1 496 244 16 31 chr5 139914219 139914346 -59715804 - L2 LINE L2 -5 3308 3184 781 296 118 33 chr5 139914483 139914662 -59715488 + L2 LINE L2 2541 2703 -610 1990 136 7 7 chr5 139914662 139914957 -59715193 - AluSx SINE Alu -17 295 1 781 296 118 33 chr5 139914957 139915404 -59714746 + L2 LINE L2 2703 3219 -94 257 238 63 16 chr5 139915992 139916055 -59714095 - L2 LINE L2 -7 3265 3200 1549 154 40 26 chr5 139916309 139916605 -59713545 + AluJo SINE Alu 6 305 0 23 68 0 0 chr5 139917050 139917094 -59713056 + AT_rich Low_complexity Low_complexity 1 44 0 1515 130 31 0 chr5 139917196 139917419 -59712731 - MER30 DNA MER1_type 0 230 1 1833 59 0 0 chr5 139917645 139917866 -59712284 + L1MA1 LINE L1 6075 6295 -7 374 299 6 51 chr5 139917954 139918037 -59712113 - MIR SINE MIR -2 260 186 2440 73 3 16 chr5 139918037 139918353 -59711797 - AluSp SINE Alu -1 312 1 374 299 6 51 chr5 139918353 139918426 -59711724 - MIR SINE MIR -76 186 111 1708 196 0 3 chr5 139918846 139919142 -59711008 - AluJb SINE Alu -9 303 9 1933 109 53 0 chr5 139920558 139920824 -59709326 + AluSx SINE Alu 3 282 -30 859 104 0 7 chr5 139920826 139920961 -59709189 + (GGAA)n Simple_repeat Simple_repeat 3 136 0 593 247 73 50 chr5 139921281 139921501 -59708649 + MLT1J LTR MaLR 3 216 -295 2506 76 0 0 chr5 139921501 139921805 -59708345 - AluSc SINE Alu -5 304 1 593 247 73 50 chr5 139921805 139922019 -59708131 + MLT1J LTR MaLR 216 511 0 466 308 49 67 chr5 139923181 139923568 -59706582 - MLT1J LTR MaLR -20 491 112 230 254 0 42 chr5 139923668 139923739 -59706411 - MLT1L LTR MaLR -541 74 7 2337 103 0 7 chr5 139924755 139925065 -59705085 - AluSq SINE Alu -2 311 4 1320 211 25 0 chr5 139925087 139925401 -59704749 - AluJb SINE Alu 0 321 1 2276 93 0 0 chr5 139925617 139925917 -59704233 - AluY SINE Alu -11 300 1 2889 136 53 52 chr5 139926384 139926446 -59703704 - L1MB3 LINE L1 -8 6175 6115 2215 103 10 3 chr5 139926446 139926747 -59703403 - AluSq SINE Alu -10 303 1 2889 136 53 52 chr5 139926747 139927208 -59702942 - L1MB3 LINE L1 -68 6115 5651 2369 62 7 42 chr5 139927220 139927529 -59702621 - AluY SINE Alu -13 298 1 293 306 82 48 chr5 139927666 139927813 -59702337 + MIR3 SINE MIR 57 208 0 1470 229 44 30 chr5 140027974 140028380 -59601770 - Tigger3b DNA MER2_type -818 413 2 1194 152 78 0 chr5 140028380 140028584 -59601566 - MLT-int LTR MaLR -1287 448 229 386 315 14 28 chr5 140028615 140028758 -59601392 + MER5B DNA MER1_type 16 156 -22 1149 196 4 0 chr5 140028801 140029031 -59601119 + L1M4 LINE L1 4614 4844 -1302 1559 203 116 9 chr5 140029035 140029380 -59600770 + MSTD LTR MaLR 1 382 -14 1123 260 37 6 chr5 140029382 140029736 -59600414 + L1M4 LINE L1 4870 5234 -912 22 0 0 0 chr5 140030769 140030791 -59599359 + AT_rich Low_complexity Low_complexity 1 22 0 1714 226 42 9 chr5 140032383 140032812 -59597338 - Charlie4a DNA MER1_type -44 464 22 1348 165 23 11 chr5 140032936 140033202 -59596948 - L1 LINE L1 -810 5336 5068 2662 164 18 15 chr5 140033202 140033658 -59596492 - L1PB1 LINE L1 -1 6866 6410 515 196 0 0 chr5 140033658 140033755 -59596395 - L1PB1 LINE L1 -3141 3721 3625 * 9420 186 141 9 chr5 140033754 140035942 -59594208 - L1PB1 LINE L1 -4282 2581 105 211 380 0 0 chr5 140036669 140036740 -59593410 + L3 LINE CR1 1496 1566 -11 2943 125 114 151 chr5 140036949 140037576 -59592574 - MER39 LTR ERV1 0 707 109 1988 145 10 7 chr5 140037576 140037873 -59592277 + AluSx SINE Alu 1 298 -14 2943 125 114 151 chr5 140037873 140037979 -59592171 - MER39 LTR ERV1 -598 109 1 281 302 30 55 chr5 140038172 140038374 -59591776 - HAL1b LINE L1 -7 1341 1145 510 236 31 0 chr5 140038505 140038632 -59591518 + L1M4 LINE L1 3909 4039 -2107 1751 100 48 0 chr5 140038634 140038884 -59591266 - L1PA11 LINE L1 0 6174 5913 256 256 64 13 chr5 140040005 140040083 -59590067 - L2 LINE L2 -36 3236 3155 338 137 0 14 chr5 140042895 140042968 -59587182 + (TA)n Simple_repeat Simple_repeat 2 73 0 3292 151 75 9 chr5 140043184 140043742 -59586408 + LTR49 LTR ERV1 1 595 0 1384 182 151 48 chr5 140043852 140044204 -59585946 - MLT1B LTR MaLR -2 388 1 1913 262 36 18 chr5 140044502 140045055 -59585095 + MER74B LTR ERVL 59 621 -1 288 0 0 0 chr5 140046238 140046270 -59583880 + (TG)n Simple_repeat Simple_repeat 2 33 0 6742 86 15 0 chr5 140046610 140047558 -59582592 - L1PA10 LINE L1 -12 6156 5199 619 206 21 14 chr5 140047639 140047780 -59582370 - L1PA12 LINE L1 -1 6167 6026 247 319 132 28 chr5 140048593 140048806 -59581344 - MLT1K LTR MaLR -65 523 289 248 224 0 60 chr5 140048836 140048903 -59581247 - MLT1L LTR MaLR -414 201 139 487 224 0 19 chr5 140049050 140049206 -59580944 + GA-rich Low_complexity Low_complexity 4 156 0 376 286 123 18 chr5 140049645 140049816 -59580334 + MIR SINE MIR 53 241 -21 213 231 39 0 chr5 140050101 140050153 -59579997 + GA-rich Low_complexity Low_complexity 4 57 0 1245 228 6 67 chr5 140050579 140050895 -59579255 - AluJb SINE Alu -4 298 2 294 199 130 53 chr5 140051385 140051516 -59578634 - MER103 DNA DNA -9 157 17 204 264 0 0 chr5 140051783 140051836 -59578314 + L2 LINE L2 3256 3308 -5 758 316 37 8 chr5 140052327 140052571 -59577579 + MIR SINE MIR 2 252 -10 360 0 0 0 chr5 140052747 140052787 -59577363 + (TG)n Simple_repeat Simple_repeat 2 41 0 1653 167 94 72 chr5 140052900 140053355 -59576795 - MLT1C LTR MaLR 0 467 3 1572 178 3 57 chr5 140053397 140053712 -59576438 + AluJo SINE Alu 1 298 -14 246 105 0 0 chr5 140053712 140053750 -59576400 + (GA)n Simple_repeat Simple_repeat 1 38 0 184 312 64 99 chr5 140054084 140054183 -59575967 + L2 LINE L2 3132 3226 -46 1515 178 22 102 chr5 140054183 140054542 -59575608 - MLT1A2 LTR MaLR -2 372 47 1520 171 91 4 chr5 140054542 140054805 -59575345 - AluJo SINE Alu -26 286 1 1515 178 22 102 chr5 140054805 140054849 -59575301 - MLT1A2 LTR MaLR -327 47 1 184 312 64 99 chr5 140054849 140054890 -59575260 + L2 LINE L2 3226 3267 -5 669 147 191 0 chr5 140054926 140055083 -59575067 - MER53 DNA DNA -2 187 1 541 92 35 11 chr5 140055148 140055235 -59574915 - MER53 DNA DNA -83 106 18 * 544 25 0 50 chr5 140055159 140055239 -59574911 + MER53 DNA DNA 105 180 -9 616 189 0 33 chr5 140058666 140058788 -59571362 + L1MC1 LINE L1 6198 6315 -18 305 62 21 0 chr5 140058823 140058871 -59571279 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 225 328 49 49 chr5 140058900 140059022 -59571128 + MER102b DNA MER1_type 210 331 -10 1636 135 115 3 chr5 140059067 140059379 -59570771 - L1MA7 LINE L1 -51 6240 5894 22 0 0 0 chr5 140059689 140059711 -59570439 + AT_rich Low_complexity Low_complexity 1 22 0 205 234 85 0 chr5 140060688 140060735 -59569415 + MIR3 SINE MIR 119 169 -39 243 292 144 70 chr5 140061030 140061273 -59568877 - L2 LINE L2 -346 2968 2708 188 250 143 0 chr5 140061609 140061665 -59568485 + L2 LINE L2 3246 3309 -4 233 279 89 44 chr5 140061945 140062103 -59568047 - MIR SINE MIR 0 262 98 1368 290 100 10 chr5 140062287 140063054 -59567096 - L2 LINE L2 0 3313 2480 282 250 100 92 chr5 140063260 140063380 -59566770 + MIR3 SINE MIR 74 194 -14 361 233 0 58 chr5 140063894 140063997 -59566153 - LTR49 LTR ERV1 -11 584 488 1322 157 11 75 chr5 140063997 140064277 -59565873 + AluJo SINE Alu 40 301 -11 612 124 21 62 chr5 140064278 140064375 -59565775 + AluJo/FRAM SINE Alu 190 282 -30 429 20 0 0 chr5 140064375 140064425 -59565725 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 3006 143 120 12 chr5 140064426 140065030 -59565120 - LTR48 LTR ERV1 -116 671 6 2333 154 46 0 chr5 140065030 140065400 -59564750 + MER39B LTR ERV1 1 387 -266 25 0 0 0 chr5 140065400 140065425 -59564725 + AT_rich Low_complexity Low_complexity 1 25 0 804 165 8 24 chr5 140065425 140065552 -59564598 - FLAM_C SINE Alu -14 129 5 1391 152 106 8 chr5 140065553 140065817 -59564333 + MER39 LTR ERV1 413 702 -5 1985 112 30 17 chr5 140066127 140066423 -59563727 - AluSp SINE Alu -13 300 1 1730 168 3 37 chr5 140068815 140069137 -59561013 - AluJb SINE Alu -1 311 1 264 274 95 26 chr5 140069354 140069489 -59560661 - MER5B DNA MER1_type -28 161 7 336 303 6 79 chr5 140069855 140070020 -59560130 + MIR SINE MIR 110 262 0 2126 133 3 7 chr5 140071236 140071544 -59558606 - AluJb SINE Alu -5 307 1 1714 171 24 17 chr5 140071571 140071864 -59558286 + AluSc SINE Alu 1 295 -14 1998 122 55 81 chr5 140072076 140072461 -59557689 + THE1C LTR MaLR 1 375 0 308 271 0 21 chr5 140072835 140072931 -59557219 - MIR3 SINE MIR -9 199 106 184 341 77 0 chr5 140073071 140073162 -59556988 + MIR SINE MIR 111 208 -54 1588 93 17 137 chr5 140073195 140073577 -59556573 + AluSq SINE Alu 1 341 0 409 209 216 8 chr5 140074129 140074263 -59555887 - MER5A DNA MER1_type -1 188 27 210 213 62 0 chr5 140074419 140074499 -59555651 + (TA)n Simple_repeat Simple_repeat 2 86 0 324 262 0 65 chr5 140074766 140074873 -59555277 + MIR SINE MIR 163 262 0 1437 179 103 74 chr5 140075054 140075239 -59554911 - LTR54B LTR ERV1 0 498 320 1552 163 38 42 chr5 140075239 140075552 -59554598 + AluJb SINE Alu 1 312 0 1437 179 103 74 chr5 140075552 140075841 -59554309 - LTR54B LTR ERV1 -178 320 10 349 324 156 30 chr5 140076031 140076435 -59553715 - L2 LINE L2 -11 3261 2807 2540 124 86 2 chr5 140076631 140077026 -59553124 - MSTA LTR MaLR 0 428 1 2021 137 7 104 chr5 140077161 140077584 -59552566 - MLT1B LTR MaLR -8 382 1 222 208 0 0 chr5 140078068 140078121 -59552029 + (CA)n Simple_repeat Simple_repeat 1 53 0 2102 133 0 7 chr5 140078436 140078744 -59551406 + AluSg SINE Alu 1 306 -4 274 349 40 23 chr5 140079482 140079657 -59550493 + MIR3 SINE MIR 29 206 -2 381 257 147 0 chr5 140080561 140080670 -59549480 + MER5B DNA MER1_type 1 125 -53 618 183 89 66 chr5 140080675 140080888 -59549262 + MER34C LTR ERV1 361 578 -7 2137 247 104 33 chr5 140080893 140081783 -59548367 + L1MC4 LINE L1 6640 7593 -449 3210 86 11 33 chr5 140081788 140082244 -59547906 + LTR7 LTR ERV1 3 448 -2 10374 112 14 18 chr5 140082262 140083895 -59546255 + HERVH LTR ERV1 60 1685 -6028 6375 210 47 6 chr5 140083995 140085522 -59544628 - L1 LINE L1 -1860 4286 2698 953 199 6 0 chr5 140085529 140085695 -59544455 - L1PA15-16 LINE L1 -5795 1054 888 243 276 13 13 chr5 140085776 140085852 -59544298 + L2 LINE L2 2174 2249 -1065 432 309 126 10 chr5 140086323 140086530 -59543620 + L2 LINE L2 2286 2516 -798 1646 158 0 36 chr5 140091177 140091455 -59538695 - AluJo SINE Alu -15 297 30 315 0 0 0 chr5 140091594 140091629 -59538521 + (CA)n Simple_repeat Simple_repeat 1 35 0 449 198 0 50 chr5 140092809 140092910 -59537240 + L1MC2 LINE L1 6240 6335 -9 241 308 142 25 chr5 140093341 140093461 -59536689 + MIR SINE MIR 24 157 -105 261 262 145 0 chr5 140093607 140093725 -59536425 - MIR SINE MIR -63 145 21 447 343 5 30 chr5 140094248 140094446 -59535704 - MIR SINE MIR -47 215 23 307 320 97 17 chr5 140094653 140094828 -59535322 + MIR SINE MIR 3 191 -71 23 33 0 0 chr5 140095386 140095416 -59534734 + AT_rich Low_complexity Low_complexity 1 30 0 202 164 218 0 chr5 140095874 140095929 -59534221 - MIR3 SINE MIR -7 201 135 205 184 0 0 chr5 140097417 140097455 -59532695 + CT-rich Low_complexity Low_complexity 2 39 0 275 214 52 17 chr5 140097491 140097664 -59532486 + (TA)n Simple_repeat Simple_repeat 1 179 0 1306 226 107 33 chr5 140097692 140098029 -59532121 - MLT1A2 LTR MaLR -11 363 2 192 77 0 0 chr5 140098029 140098055 -59532095 + (TATATG)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr5 140099671 140099693 -59530457 + AT_rich Low_complexity Low_complexity 1 22 0 3269 74 9 5 chr5 140100056 140100486 -59529664 + MLT2A1 LTR ERVL 1 432 -12 201 74 0 0 chr5 140102123 140102150 -59528000 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1234 192 145 20 chr5 140102337 140102681 -59527469 - MLT1B LTR MaLR 0 390 4 402 370 85 12 chr5 140102708 140102873 -59527277 - MER91A DNA MER1_type -2 194 18 824 250 25 10 chr5 140103331 140103531 -59526619 + MIR SINE MIR 2 204 -58 980 214 94 57 chr5 140103532 140103850 -59526300 + MER46C DNA MER2_type 8 337 -1 224 333 13 0 chr5 140103977 140104052 -59526098 - MIR3 SINE MIR -1 207 132 2922 232 74 11 chr5 140104070 140104548 -59525602 + L1MEc LINE L1 43 592 -5804 199 0 31 31 chr5 140104548 140104580 -59525570 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 2922 232 74 11 chr5 140104580 140104899 -59525251 + L1MEc LINE L1 592 890 -5506 * 6517 225 60 20 chr5 140104898 140108805 -59521345 + L1MD1 LINE L1 50 4506 -2034 382 174 165 91 chr5 140108805 140108926 -59521224 + FLAM_A SINE Alu 1 130 -3 6517 225 60 20 chr5 140108926 140109305 -59520845 + L1MD1 LINE L1 4506 4868 -1672 * 10114 156 42 6 chr5 140109302 140113674 -59516476 - L1PA10 LINE L1 -2185 4677 3 6071 170 29 18 chr5 140113684 140115897 -59514253 + L1PA10 LINE L1 4648 6884 0 4967 115 5 48 chr5 140115893 140116332 -59513818 + L1PB1 LINE L1 5352 5808 -343 * 480 35 0 0 chr5 140116332 140116390 -59513760 + (TA)n Simple_repeat Simple_repeat 1 58 0 243 0 0 0 chr5 140116389 140116416 -59513734 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 4967 115 5 48 chr5 140116390 140116809 -59513341 + L1PB1 LINE L1 5808 6148 -3 4778 190 56 23 chr5 140116885 140118538 -59511612 + L1MD1 LINE L1 4850 6577 -59 1736 274 59 47 chr5 140118667 140119546 -59510604 + L1MEc LINE L1 1027 1916 -4480 549 235 95 80 chr5 140119577 140119824 -59510326 + L1ME1 LINE L1 5823 6078 -88 2300 114 30 30 chr5 140119824 140120185 -59509965 - THE1B LTR MaLR -3 361 1 549 235 95 80 chr5 140120185 140120273 -59509877 + L1ME1 LINE L1 6078 6163 -3 1305 199 32 0 chr5 140120314 140120560 -59509590 + AluJo SINE Alu 34 287 -25 371 321 115 18 chr5 140121352 140121517 -59508633 + MER5A DNA MER1_type 7 187 -2 725 177 13 21 chr5 140121791 140121958 -59508192 + L1MA4 LINE L1 5874 6038 -259 381 158 37 0 chr5 140121958 140122040 -59508110 + L1MB4 LINE L1 6096 6180 0 21 36 0 0 chr5 140122119 140122147 -59508003 + AT_rich Low_complexity Low_complexity 1 28 0 215 309 127 40 chr5 140123313 140123439 -59506711 + L2 LINE L2 3132 3268 -4 26 30 0 0 chr5 140124440 140124473 -59505677 + AT_rich Low_complexity Low_complexity 1 33 0 635 278 63 32 chr5 140124723 140124975 -59505175 + MIR SINE MIR 2 261 -1 213 254 70 14 chr5 140124966 140125037 -59505113 - L2 LINE L2 -27 3245 3171 * 330 281 201 30 chr5 140125827 140126026 -59504124 - MLT1K LTR MaLR -219 369 137 402 265 6 16 chr5 140126041 140126211 -59503939 + MIR SINE MIR 15 240 -22 339 138 30 2 chr5 140126573 140126805 -59503345 + AluSx SINE Alu 1 281 -20 335 78 20 0 chr5 140126808 140126859 -59503291 + (TAAAA)n Simple_repeat Simple_repeat 2 53 0 240 224 0 17 chr5 140127069 140127127 -59503023 + GA-rich Low_complexity Low_complexity 4 60 0 324 206 41 27 chr5 140128314 140128387 -59501763 - L2 LINE L2 -1 3312 3239 215 338 121 31 chr5 140128542 140128865 -59501285 - L2 LINE L2 -148 3165 2814 712 218 117 34 chr5 140130154 140130360 -59499790 - L1ME2 LINE L1 -9 6155 5933 567 205 63 89 chr5 140130379 140130628 -59499522 + L1ME2 LINE L1 5796 6036 -130 327 191 90 22 chr5 140130628 140130717 -59499433 + L1MA10 LINE L1 6238 6332 -2 321 270 152 46 chr5 140130820 140131209 -59498941 - L1M4 LINE L1 -4927 1615 1186 814 236 54 6 chr5 140131716 140132199 -59497951 - L1ME3 LINE L1 0 6162 5607 456 245 15 60 chr5 140132198 140132248 -59497902 - L1MEc LINE L1 -3819 2396 2345 * 3619 92 30 0 chr5 140132248 140132757 -59497393 - L1PA10 LINE L1 -11 6157 5634 456 245 15 60 chr5 140132757 140132906 -59497244 - L1MEc LINE L1 -3870 2345 2206 1494 164 64 42 chr5 140132942 140133432 -59496718 - LTR49 LTR ERV1 -31 564 15 1821 162 36 0 chr5 140133485 140133787 -59496363 - MER7A DNA MER2_type 0 346 36 658 281 17 21 chr5 140133859 140134094 -59496056 - L1MEc LINE L1 -4322 2074 1841 240 277 150 32 chr5 140134523 140134862 -59495288 + L1ME LINE L1 517 895 -5175 * 1426 245 9 55 chr5 140134858 140135278 -59494872 + L1ME2 LINE L1 5428 5828 -336 1515 226 41 53 chr5 140135285 140135405 -59494745 + MLT1C LTR MaLR 6 126 -341 2285 108 0 0 chr5 140135405 140135701 -59494449 + AluSx SINE Alu 1 296 -16 1515 226 41 53 chr5 140135701 140136048 -59494102 + MLT1C LTR MaLR 126 467 0 767 198 78 56 chr5 140136048 140136280 -59493870 + L1ME2 LINE L1 5826 6062 -102 336 261 11 0 chr5 140136321 140136409 -59493741 + L1ME2 LINE L1 6066 6154 -10 327 306 45 50 chr5 140136453 140136652 -59493498 + L1MC4 LINE L1 7826 8023 -19 555 254 151 34 chr5 140136706 140137118 -59493032 + L1ME LINE L1 922 1434 -4827 503 318 32 16 chr5 140137136 140137325 -59492825 - MIR SINE MIR -6 256 65 21 0 0 0 chr5 140137783 140137804 -59492346 + AT_rich Low_complexity Low_complexity 1 21 0 207 295 0 0 chr5 140138127 140138188 -59491962 + (TA)n Simple_repeat Simple_repeat 2 62 0 210 265 18 0 chr5 140138216 140138382 -59491768 + (TA)n Simple_repeat Simple_repeat 1 169 0 1063 127 57 42 chr5 140138770 140138982 -59491168 - THE1C LTR MaLR 0 375 161 1310 200 46 10 chr5 140138982 140139294 -59490856 - THE1-int LTR MaLR -924 710 382 243 255 122 10 chr5 140139302 140139400 -59490750 + L2 LINE L2 3191 3299 -14 23 54 0 0 chr5 140139957 140139994 -59490156 + AT_rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr5 140140163 140140199 -59489951 + AT_rich Low_complexity Low_complexity 1 36 0 309 254 27 36 chr5 140140219 140140329 -59489821 - L1MC4 LINE L1 -1322 6720 6612 709 98 36 38 chr5 140140348 140140898 -59489252 + (TA)n Simple_repeat Simple_repeat 1 548 0 1048 261 97 33 chr5 140140950 140141372 -59488778 + LTR16A1 LTR ERVL 9 457 0 25 0 0 0 chr5 140141523 140141548 -59488602 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 140141630 140141653 -59488497 + AT_rich Low_complexity Low_complexity 1 23 0 219 319 181 14 chr5 140141945 140142083 -59488067 - MIR SINE MIR -23 239 79 966 155 3 169 chr5 140142118 140142408 -59487742 + LTR49 LTR ERV1 1 242 -353 1359 182 104 20 chr5 140142412 140142824 -59487326 + LTR48 LTR ERV1 345 705 -2 23 0 0 0 chr5 140144595 140144618 -59485532 + AT_rich Low_complexity Low_complexity 1 23 0 3724 123 47 31 chr5 140146022 140146665 -59483485 - MER39B LTR ERV1 0 653 1 319 348 114 0 chr5 140147212 140147370 -59482780 - L3 LINE CR1 -325 1252 1077 1360 197 50 23 chr5 140147918 140148217 -59481933 + AluJb SINE Alu 4 310 -2 200 208 91 117 chr5 140148250 140148327 -59481823 - L2 LINE L2 -62 3210 3136 381 369 125 14 chr5 140148351 140148711 -59481439 - L3 LINE CR1 -600 977 578 260 289 252 6 chr5 140148752 140148909 -59481241 - MIR SINE MIR -56 206 5 515 328 54 60 chr5 140149189 140149503 -59480647 - L3 LINE CR1 -1199 378 67 360 280 144 0 chr5 140149830 140149962 -59480188 + MIR SINE MIR 112 262 0 212 343 90 8 chr5 140150057 140150191 -59479959 + L3 LINE CR1 1350 1494 -83 237 269 128 0 chr5 140150232 140150310 -59479840 + MER117 DNA MER1_type 30 117 -80 188 333 161 0 chr5 140150626 140150719 -59479431 - L2 LINE L2 0 3272 3165 953 167 0 39 chr5 140150722 140150902 -59479248 + MER2 DNA MER2_type 1 173 -172 302 180 0 0 chr5 140150992 140151042 -59479108 + MER2 DNA MER2_type 270 319 -26 2046 152 0 3 chr5 140151710 140152013 -59478137 - AluJo SINE Alu 0 312 11 186 43 0 0 chr5 140152035 140152058 -59478092 + (T)n Simple_repeat Simple_repeat 1 23 0 24 53 0 0 chr5 140152402 140152440 -59477710 + AT_rich Low_complexity Low_complexity 1 38 0 2281 111 0 3 chr5 140152513 140152810 -59477340 - AluSx SINE Alu -16 296 1 1824 147 48 45 chr5 140156637 140157011 -59473139 - THE1C LTR MaLR 0 375 1 255 125 0 0 chr5 140157580 140157620 -59472530 + (TA)n Simple_repeat Simple_repeat 2 41 0 319 275 58 42 chr5 140159468 140159588 -59470562 + MIR SINE MIR 98 219 -43 324 358 74 19 chr5 140162258 140162420 -59467730 - MER5B DNA MER1_type -1 177 7 2485 49 0 13 chr5 140162934 140163239 -59466911 - AluY SINE Alu -10 301 1 973 186 113 4 chr5 140163441 140163689 -59466461 - ORSL DNA AcHobo 0 275 1 641 174 21 14 chr5 140163701 140163845 -59466305 - MER45A DNA AcHobo 0 178 34 216 184 0 0 chr5 140165247 140165296 -59464854 + (TG)n Simple_repeat Simple_repeat 2 50 0 23 33 0 0 chr5 140165887 140165917 -59464233 + AT_rich Low_complexity Low_complexity 1 30 0 860 115 0 0 chr5 140165917 140166047 -59464103 - L1MA1 LINE L1 0 6302 6173 1766 131 81 34 chr5 140166539 140166897 -59463253 + THE1C LTR MaLR 1 375 0 9648 122 49 10 chr5 140166897 140167254 -59462896 + THE1C-int LTR MaLR 1 343 -1237 2079 128 20 10 chr5 140167254 140167551 -59462599 - AluSx SINE Alu -8 304 5 9648 122 49 10 chr5 140167551 140168712 -59461438 + THE1C-int LTR MaLR 343 1578 -2 2027 125 55 33 chr5 140168714 140169081 -59461069 + THE1C LTR MaLR 1 375 0 209 267 0 0 chr5 140169992 140170037 -59460113 - MIR SINE MIR -74 134 90 509 261 39 72 chr5 140170058 140170265 -59459885 + MIR SINE MIR 32 231 -31 523 215 89 118 chr5 140170966 140171212 -59458938 + MER102b DNA MER1_type 103 341 0 265 305 81 38 chr5 140171626 140171836 -59458314 - L2 LINE L2 -18 3295 3077 364 233 145 35 chr5 140172440 140172612 -59457538 + MLT1D LTR MaLR 1 191 -314 590 301 56 9 chr5 140173293 140173521 -59456629 + MIR SINE MIR 15 251 -11 1492 181 24 0 chr5 140173544 140173832 -59456318 - LTR32 LTR ERVL -162 309 15 1721 154 25 28 chr5 140175828 140175858 -59454292 - L1MC1 LINE L1 -4 6329 6300 2045 129 3 29 chr5 140175858 140176169 -59453981 + AluSg SINE Alu 1 303 -7 1721 154 25 28 chr5 140176169 140176463 -59453687 - L1MC1 LINE L1 -33 6300 6006 41744 45 2 0 chr5 140177473 140183616 -59446534 + L1PA4 LINE L1 2 6155 0 380 248 118 81 chr5 140183910 140184156 -59445994 + L1MC4 LINE L1 7757 8011 -31 29 28 0 0 chr5 140184336 140184372 -59445778 + AT_rich Low_complexity Low_complexity 1 36 0 317 278 9 0 chr5 140185608 140185723 -59444427 - L1MC1 LINE L1 -304 5817 5702 440 319 129 36 chr5 140185798 140186453 -59443697 - L1MC1 LINE L1 -521 5600 4885 2023 62 31 0 chr5 140186480 140186736 -59443414 - AluY SINE Alu -2 309 46 244 211 0 0 chr5 140186741 140186793 -59443357 - L1MC1 LINE L1 -1300 4846 4795 2212 110 0 3 chr5 140187300 140187600 -59442550 - AluSg SINE Alu -11 299 1 2302 109 3 0 chr5 140187997 140188300 -59441850 + AluSp SINE Alu 5 308 -5 2517 80 3 0 chr5 140188785 140189097 -59441053 - AluSp SINE Alu 0 313 1 205 299 69 0 chr5 140189952 140190039 -59440111 - MIR SINE MIR -2 260 168 2409 46 0 3 chr5 140190913 140191220 -59438930 + AluY SINE Alu 1 306 0 2791 163 11 22 chr5 140191514 140192060 -59438090 - L1MB3 LINE L1 -150 6033 5494 829 269 44 14 chr5 140192060 140192431 -59437719 - L1ME2 LINE L1 -289 5875 5484 755 206 27 5 chr5 140192916 140193100 -59437050 + MER96B DNA MER1_type? 1 188 -229 722 190 21 0 chr5 140193502 140193644 -59436506 - MLT1B LTR MaLR 0 390 246 2541 152 21 33 chr5 140193763 140194245 -59435905 + MER41E LTR ERV1 1 476 -36 1429 206 132 72 chr5 140194245 140195013 -59435137 + LTR1B LTR ERV1 1 1003 -17 858 203 19 34 chr5 140195115 140195322 -59434828 - MLT1B LTR MaLR -178 212 9 272 169 0 17 chr5 140196827 140196886 -59433264 + GA-rich Low_complexity Low_complexity 3 60 0 227 100 0 25 chr5 140197205 140197245 -59432905 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 2094 136 13 7 chr5 140197393 140197683 -59432467 + AluSx SINE Alu 1 295 -17 993 113 0 32 chr5 140197683 140197868 -59432282 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 2094 136 13 7 chr5 140197868 140197886 -59432264 + AluSx SINE Alu 295 311 -1 335 23 23 0 chr5 140197913 140197957 -59432193 + (GAAAA)n Simple_repeat Simple_repeat 1 45 0 186 227 0 0 chr5 140199807 140199851 -59430299 + GA-rich Low_complexity Low_complexity 1 44 0 886 241 13 30 chr5 140201906 140202142 -59428008 + MIR SINE MIR 10 241 -21 815 227 44 18 chr5 140202292 140202517 -59427633 - MLT1A1 LTR MaLR 0 365 135 1037 169 12 0 chr5 140202522 140202694 -59427456 + AluSg/x SINE Alu 138 311 -1 532 144 0 0 chr5 140202703 140202793 -59427357 - MLT1A1 LTR MaLR -282 92 3 225 0 0 0 chr5 140203430 140203455 -59426695 + (A)n Simple_repeat Simple_repeat 1 25 0 695 205 92 20 chr5 140203525 140203720 -59426430 + MIR SINE MIR 34 242 -20 1224 245 95 27 chr5 140203819 140204309 -59425841 + MLT1F1 LTR MaLR 3 588 -7 314 286 20 10 chr5 140204540 140204638 -59425512 - MER81 DNA DNA 0 114 16 2270 121 3 0 chr5 140204711 140205009 -59425141 + AluSx SINE Alu 1 299 -13 529 274 89 6 chr5 140205936 140206115 -59424035 - MIR SINE MIR 0 262 69 291 252 22 37 chr5 140206335 140206489 -59423661 + GA-rich Low_complexity Low_complexity 1 151 0 1914 144 3 52 chr5 140206748 140207074 -59423076 + AluSx SINE Alu 3 312 0 2266 173 2 15 chr5 140207264 140207663 -59422487 - MSTD LTR MaLR 0 396 3 691 159 15 8 chr5 140207665 140207797 -59422353 - MSTD-int LTR MaLR 0 1735 1603 247 158 0 0 chr5 140207806 140207844 -59422306 + Alu SINE Alu 1 38 -265 4908 123 4 14 chr5 140207849 140208631 -59421519 + THE1C-int LTR MaLR 793 1566 -14 2170 117 13 35 chr5 140208655 140209032 -59421118 + THE1C LTR MaLR 7 375 0 1180 216 0 0 chr5 140209032 140209259 -59420891 + L1PB3 LINE L1 155 381 -5823 421 121 66 11 chr5 140209288 140209379 -59420771 + L1PB3 LINE L1 628 723 -5481 12591 200 20 17 chr5 140209382 140214062 -59416088 + L1PB3 LINE L1 1505 6211 0 38 22 0 0 chr5 140214062 140214107 -59416043 + AT_rich Low_complexity Low_complexity 1 45 0 3393 149 39 11 chr5 140214107 140214750 -59415400 - Tigger3b DNA MER2_type -569 662 2 1095 152 78 0 chr5 140214750 140214954 -59415196 - MSTD-int LTR MaLR -1287 448 229 392 315 14 28 chr5 140214985 140215128 -59415022 + MER5B DNA MER1_type 16 156 -22 1037 194 4 0 chr5 140215174 140215401 -59414749 + L1M4 LINE L1 4617 4844 -1302 1413 203 116 9 chr5 140215405 140215750 -59414400 + MSTD LTR MaLR 1 382 -14 972 260 37 6 chr5 140215752 140216106 -59414044 + L1M4 LINE L1 4870 5234 -912 22 0 0 0 chr5 140217139 140217161 -59412989 + AT_rich Low_complexity Low_complexity 1 22 0 1511 226 42 9 chr5 140218724 140219153 -59410997 - Charlie4a DNA MER1_type -44 464 22 1222 165 23 11 chr5 140219276 140219542 -59410608 - L1 LINE L1 -810 5336 5068 2459 158 18 16 chr5 140219554 140219998 -59410152 - L1PB1 LINE L1 -13 6854 6410 466 196 0 0 chr5 140219998 140220095 -59410055 - L1PB1 LINE L1 -3141 3721 3625 * 8155 174 152 9 chr5 140220094 140222107 -59408043 - L1PB1 LINE L1 -4282 2581 282 213 39 0 0 chr5 140222441 140222467 -59407683 + (ATG)n Simple_repeat Simple_repeat 2 27 0 215 380 0 0 chr5 140223209 140223280 -59406870 + L3 LINE CR1 1496 1566 -11 2281 130 120 157 chr5 140223489 140224116 -59406034 - MER39 LTR ERV1 0 707 107 2008 145 10 7 chr5 140224116 140224413 -59405737 + AluSx SINE Alu 1 298 -14 2281 130 120 157 chr5 140224413 140224491 -59405659 - MER39 LTR ERV1 -600 107 28 242 248 51 60 chr5 140224855 140224972 -59405178 - HAL1b LINE L1 -86 1262 1147 454 236 31 0 chr5 140225105 140225232 -59404918 + L1M4 LINE L1 3909 4039 -2107 1624 100 48 0 chr5 140225234 140225484 -59404666 - L1PA11 LINE L1 0 6174 5913 260 282 51 0 chr5 140226605 140226683 -59403467 - L2 LINE L2 -36 3236 3155 8046 105 9 31 chr5 140227573 140228909 -59401241 + HERVH LTR ERV1 1689 2995 -4718 890 133 6 13 chr5 140228880 140229038 -59401112 + HERVH LTR ERV1 3134 3290 -4423 * 3253 103 0 8 chr5 140229028 140229534 -59400616 + HERVH LTR ERV1 3492 3993 -3720 3901 152 17 1 chr5 140229536 140230188 -59399962 + HERVH LTR ERV1 4488 5149 -2564 1194 118 84 0 chr5 140230189 140230392 -59399758 + HERVH LTR ERV1 5600 5819 -1894 2117 109 50 13 chr5 140230392 140230768 -59399382 + HERVH LTR ERV1 7324 7713 0 2720 80 94 14 chr5 140230768 140231183 -59398967 + LTR7 LTR ERV1 1 448 -2 229 237 193 26 chr5 140231188 140231302 -59398848 + L1MC4 LINE L1 7597 7729 -313 251 218 0 0 chr5 140231308 140231363 -59398787 + L1MC4 LINE L1 7963 8017 -25 197 215 0 25 chr5 140234384 140234463 -59395687 + (CATA)n Simple_repeat Simple_repeat 4 80 0 338 0 0 23 chr5 140234572 140234615 -59395535 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 2399 75 13 0 chr5 140234618 140234924 -59395226 - AluY SINE Alu -1 310 1 198 361 46 37 chr5 140235391 140235499 -59394651 + MIR SINE MIR 31 139 -69 3068 155 52 2 chr5 140235541 140236065 -59394085 + MER44D DNA MER2_type 1 605 0 2152 129 117 30 chr5 140236116 140236355 -59393795 - MSTA LTR MaLR 0 428 140 2024 162 0 0 chr5 140236355 140236657 -59393493 + AluSx SINE Alu 2 303 -9 2152 129 117 30 chr5 140236657 140236811 -59393339 - MSTA LTR MaLR -288 140 1 925 166 6 12 chr5 140236840 140237003 -59393147 + FAM SINE Alu 1 49 0 2069 123 0 26 chr5 140238136 140238445 -59391705 + AluJb SINE Alu 1 301 -11 402 294 110 17 chr5 140238446 140238864 -59391286 + L1ME4a LINE L1 5663 6119 -2 2493 156 85 39 chr5 140240176 140240230 -59389920 - MLT2B1 LTR ERVL -4 516 466 207 0 0 0 chr5 140240230 140240253 -59389897 + (CA)n Simple_repeat Simple_repeat 2 24 0 2493 156 85 39 chr5 140240253 140240691 -59389459 - MLT2B1 LTR ERVL -54 466 1 2347 111 18 52 chr5 140241440 140241828 -59388322 + THE1C LTR MaLR 1 375 0 550 253 78 37 chr5 140242059 140242304 -59387846 + MIR SINE MIR 5 259 -3 231 255 41 51 chr5 140244106 140244204 -59385946 + LTR48B LTR ERV1 1 97 -547 2053 49 4 0 chr5 140244283 140244595 -59385555 + L1PA4 LINE L1 5864 6176 0 1211 214 32 56 chr5 140244595 140244969 -59385181 + MER39 LTR ERV1 341 705 -2 2188 100 0 52 chr5 140245005 140245314 -59384836 + AluSp SINE Alu 1 293 -20 625 312 51 28 chr5 140245665 140245918 -59384232 + MIR SINE MIR 4 262 0 207 0 0 0 chr5 140246052 140246075 -59384075 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 1674 217 43 30 chr5 140246310 140246771 -59383379 - MLT1C LTR MaLR 0 467 1 255 301 102 16 chr5 140246800 140246927 -59383223 - MIR SINE MIR -75 133 17 183 80 0 0 chr5 140247160 140247185 -59382965 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 1811 217 60 0 chr5 140247379 140247830 -59382320 + L1MC4 LINE L1 7425 7902 -140 883 297 12 8 chr5 140248357 140248603 -59381547 + MIR SINE MIR 2 248 -14 187 357 36 0 chr5 140248662 140248718 -59381432 - L2 LINE L2 -30 3242 3185 534 325 85 5 chr5 140248979 140249179 -59380971 - MIR SINE MIR -6 256 41 243 303 146 0 chr5 140249244 140249333 -59380817 - L2 LINE L2 -4 3309 3208 681 265 76 55 chr5 140250534 140250772 -59379378 - MIR SINE MIR -11 251 9 651 235 95 47 chr5 140250999 140251520 -59378630 + LTR48B LTR ERV1 3 641 -3 187 343 86 50 chr5 140251547 140251687 -59378463 + L2 LINE L2 2961 3105 -167 602 341 47 18 chr5 140251791 140252067 -59378083 - MLT1K LTR MaLR -180 408 125 998 190 0 0 chr5 140252154 140252344 -59377806 + FRAM SINE Alu 1 176 0 14225 133 28 20 chr5 140252413 140254812 -59375338 - Tigger1 DNA MER2_type -1 2417 2 492 206 19 0 chr5 140255673 140255780 -59374370 + L1MC1 LINE L1 6219 6327 -6 2258 98 10 0 chr5 140256031 140256336 -59373814 + AluSq SINE Alu 1 308 -5 419 123 0 14 chr5 140256343 140256416 -59373734 + (GGAA)n Simple_repeat Simple_repeat 3 74 0 201 257 40 68 chr5 140257186 140257260 -59372890 - L3 LINE CR1 -10 1567 1496 283 287 65 0 chr5 140257499 140257607 -59372543 + MIR SINE MIR 134 248 -14 207 162 0 0 chr5 140258370 140258407 -59371743 + (TA)n Simple_repeat Simple_repeat 1 37 0 1946 171 0 3 chr5 140258414 140258724 -59371426 - AluSx SINE Alu -3 309 1 296 347 121 76 chr5 140258871 140259185 -59370965 - L2 LINE L2 0 3272 2945 1429 255 56 5 chr5 140259323 140259700 -59370450 - MSTD LTR MaLR 0 396 1 1464 173 127 6 chr5 140259705 140260029 -59370121 - MSTD-int LTR MaLR -6 1729 1367 1033 204 34 63 chr5 140260065 140260422 -59369728 - MSTD LTR MaLR 0 396 1 1664 352 132 21 chr5 140260425 140262015 -59368135 - L2 LINE L2 -433 2881 1115 257 342 111 8 chr5 140262146 140262263 -59367887 + MIR SINE MIR 16 144 -64 3078 166 59 5 chr5 140265984 140266574 -59363576 - LTR29 LTR ERV1 0 622 1 311 241 0 0 chr5 140266658 140266741 -59363409 + MLT1K LTR MaLR 486 568 -20 525 313 69 13 chr5 140267246 140267623 -59362527 + L1MCc LINE L1 17 414 -6009 1491 110 0 0 chr5 140267635 140267857 -59362293 + AluSg/x SINE Alu 94 315 0 30 27 0 0 chr5 140268013 140268050 -59362100 + AT_rich Low_complexity Low_complexity 1 37 0 923 275 64 29 chr5 140268074 140268103 -59362047 + L1MCc LINE L1 2534 2561 -4561 1747 169 4 0 chr5 140268103 140268369 -59361781 - AluJb SINE Alu -45 267 1 923 275 64 29 chr5 140268369 140268917 -59361233 + L1MCc LINE L1 2561 3131 -3991 376 268 34 106 chr5 140269024 140269203 -59360947 + MLT1H1 LTR MaLR 82 283 -312 646 128 0 9 chr5 140270907 140271016 -59359134 + L1MB7 LINE L1 4924 5031 -1115 * 1334 175 10 67 chr5 140271014 140271328 -59358822 + L1MB7 LINE L1 5868 6163 -21 1042 266 137 27 chr5 140271532 140271971 -59358179 - MLT1H LTR MaLR -50 499 13 2507 101 24 32 chr5 140272215 140272541 -59357609 + THE1C LTR MaLR 1 325 -50 2141 138 0 3 chr5 140272541 140272846 -59357304 + AluSq SINE Alu 1 304 -9 2507 101 24 32 chr5 140272846 140272897 -59357253 + THE1C LTR MaLR 325 375 0 326 255 0 29 chr5 140273096 140273198 -59356952 + HAL1 LINE L1 2123 2221 -286 21 0 0 0 chr5 140273919 140273940 -59356210 + AT_rich Low_complexity Low_complexity 1 21 0 557 305 62 24 chr5 140274913 140275137 -59355013 + MIR SINE MIR 3 236 -26 198 333 8 60 chr5 140275186 140275303 -59354847 - L2 LINE L2 -181 3091 2981 2173 84 3 11 chr5 140276296 140276615 -59353535 - AluY SINE Alu 0 317 1 410 301 32 0 chr5 140277603 140277759 -59352391 + Charlie8 DNA MER1_type 113 273 -2144 248 369 167 14 chr5 140277898 140278609 -59351541 - L2 LINE L2 -447 2867 2048 1136 283 142 11 chr5 140278612 140279071 -59351079 + LTR33 LTR ERVL 3 521 0 3414 52 9 7 chr5 140279432 140279892 -59350258 + L1PA8A LINE L1 5320 5780 -351 39069 67 2 3 chr5 140279896 140286049 -59344101 + L1PA5 LINE L1 3 6149 -5 2469 91 5 60 chr5 140286064 140286448 -59343702 + L1PA8A LINE L1 5769 6131 0 289 361 72 12 chr5 140287733 140287899 -59342251 + MIR SINE MIR 13 188 -74 2296 112 7 7 chr5 140288242 140288546 -59341604 - AluSx SINE Alu -8 304 1 3702 168 33 9 chr5 140288692 140289450 -59340700 - L1MB8 LINE L1 0 6178 5403 2352 91 0 3 chr5 140290190 140290488 -59339662 - AluSg SINE Alu -13 297 1 25 0 0 0 chr5 140290497 140290522 -59339628 + AT_rich Low_complexity Low_complexity 1 25 0 1916 127 54 43 chr5 140290629 140291000 -59339150 - THE1C LTR MaLR 0 375 1 517 216 113 46 chr5 140291308 140291502 -59338648 - MLT1H LTR MaLR -256 293 87 229 279 189 8 chr5 140291581 140291703 -59338447 - MIR SINE MIR -81 181 38 484 299 15 0 chr5 140292258 140292395 -59337755 + MIR3 SINE MIR 64 202 -6 21 0 0 0 chr5 140294558 140294579 -59335571 + AT_rich Low_complexity Low_complexity 1 21 0 1926 174 31 6 chr5 140294587 140294943 -59335207 - MLT1A1 LTR MaLR 0 365 1 21 36 0 0 chr5 140296617 140296645 -59333505 + AT_rich Low_complexity Low_complexity 1 28 0 763 191 8 0 chr5 140297315 140297446 -59332704 - FLAM_A SINE Alu 0 133 2 183 42 0 0 chr5 140298317 140298341 -59331809 + (T)n Simple_repeat Simple_repeat 1 24 0 305 253 0 20 chr5 140298361 140298460 -59331690 + MARNA DNA Mariner 261 357 -229 330 26 0 0 chr5 140298621 140298660 -59331490 + (CA)n Simple_repeat Simple_repeat 2 40 0 1260 221 48 29 chr5 140299915 140300187 -59329963 - AluJo SINE Alu -35 277 1 184 292 21 0 chr5 140300742 140300790 -59329360 + L2 LINE L2 3022 3070 -202 298 314 89 8 chr5 140300918 140301042 -59329108 + L2 LINE L2 3180 3313 0 33 85 0 0 chr5 140301297 140301379 -59328771 + AT_rich Low_complexity Low_complexity 1 82 0 223 285 269 0 chr5 140301894 140302024 -59328126 + L2 LINE L2 3107 3271 -1 22 0 0 0 chr5 140302133 140302155 -59327995 + AT_rich Low_complexity Low_complexity 1 22 0 418 256 109 52 chr5 140302581 140302811 -59327339 + L1ME LINE L1 5342 5584 -537 201 74 0 0 chr5 140302816 140302843 -59327307 + (CA)n Simple_repeat Simple_repeat 1 27 0 6491 156 27 10 chr5 140302969 140303760 -59326390 + L1MB3 LINE L1 20 839 -5545 227 31 31 0 chr5 140303760 140303792 -59326358 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6491 156 27 10 chr5 140303792 140304192 -59325958 + L1MB3 LINE L1 839 1231 -5153 4356 54 32 26 chr5 140304192 140305208 -59324942 + MER11A LTR ERVK 1 1266 0 6511 214 47 21 chr5 140305208 140305577 -59324573 + L1MB3 LINE L1 1226 1584 -4798 180 0 0 0 chr5 140305577 140305597 -59324553 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6511 214 47 21 chr5 140305597 140308682 -59321468 + L1MB3 LINE L1 1584 4772 -1610 361 259 15 15 chr5 140308687 140308818 -59321332 + L1MB3 LINE L1 5230 5360 -1022 4265 145 21 7 chr5 140308853 140310322 -59319828 - L1PB1 LINE L1 0 6151 4639 1625 184 43 19 chr5 140310333 140310828 -59319322 + L1MB3 LINE L1 5377 5880 -539 2163 119 3 12 chr5 140310828 140311173 -59318977 - Tigger1 DNA MER2_type 0 2418 2077 3629 195 32 35 chr5 140311273 140311703 -59318447 + L1MB3 LINE L1 5448 5878 -541 12978 120 24 50 chr5 140311703 140314185 -59315965 - Tigger1 DNA MER2_type 0 2418 1 3629 195 32 35 chr5 140314185 140314383 -59315767 + L1MB3 LINE L1 5878 6075 -344 2193 118 0 19 chr5 140314383 140314698 -59315452 + AluSx SINE Alu 1 309 -3 3629 195 32 35 chr5 140314698 140315047 -59315103 + L1MB3 LINE L1 6075 6418 -1 686 252 211 9 chr5 140315279 140315497 -59314653 + MIR SINE MIR 1 262 0 255 246 0 0 chr5 140316021 140316082 -59314068 + (TA)n Simple_repeat Simple_repeat 1 61 0 187 237 0 0 chr5 140321527 140321565 -59308585 + L2 LINE L2 403 440 -2874 758 311 18 51 chr5 140321957 140322288 -59307862 - MLT1G1 LTR MaLR -273 322 3 707 197 0 29 chr5 140322783 140322920 -59307230 - FLAM_C SINE Alu 0 133 1 424 257 204 13 chr5 140323530 140323682 -59306468 - MER5A DNA MER1_type -6 183 3 21 57 0 0 chr5 140325292 140325327 -59304823 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 140325343 140325367 -59304783 + AT_rich Low_complexity Low_complexity 1 24 0 438 20 0 0 chr5 140325744 140325795 -59304355 + (CA)n Simple_repeat Simple_repeat 2 52 0 332 255 166 57 chr5 140325843 140326000 -59304150 + L2 LINE L2 3118 3291 -22 187 259 0 52 chr5 140326004 140326062 -59304088 + L2 LINE L2 2613 2667 -647 1867 194 21 0 chr5 140326912 140327252 -59302898 + MER7A DNA MER2_type 2 346 0 29 0 0 0 chr5 140329761 140329790 -59300360 + AT_rich Low_complexity Low_complexity 1 29 0 1961 156 5 31 chr5 140330108 140330493 -59299657 + L1MB3 LINE L1 6037 6411 -8 28 29 0 0 chr5 140330494 140330529 -59299621 + AT_rich Low_complexity Low_complexity 1 35 0 1905 212 22 98 chr5 140332107 140332687 -59297463 + MLT1F LTR MaLR 2 537 -5 450 0 0 0 chr5 140332791 140332841 -59297309 + (TG)n Simple_repeat Simple_repeat 2 51 0 301 215 118 32 chr5 140334545 140334638 -59295512 - MIR SINE MIR 0 262 162 921 148 87 20 chr5 140334640 140334789 -59295361 - FRAM SINE Alu -22 154 1 413 127 0 0 chr5 140334924 140334987 -59295163 - MLT1E2 LTR MaLR 0 626 564 458 231 164 34 chr5 140335004 140335212 -59294938 - MLT1D LTR MaLR -270 235 1 1975 48 104 0 chr5 140335351 140335619 -59294531 - THE1A LTR MaLR 0 355 60 202 365 41 20 chr5 140336040 140336284 -59293866 - L2 LINE L2 -339 2975 2727 261 283 252 13 chr5 140336287 140336446 -59293704 + MIR SINE MIR 56 252 -10 693 248 107 17 chr5 140337375 140337609 -59292541 - MER77 LTR ERV1 -11 594 340 1764 142 35 35 chr5 140338265 140338603 -59291547 - MER44D DNA MER2_type -1 608 1 373 195 26 0 chr5 140338663 140338740 -59291410 + MER94 DNA DNA 34 112 -22 553 281 76 5 chr5 140339491 140339676 -59290474 - MIR SINE MIR -48 214 17 230 289 40 26 chr5 140339675 140339751 -59290399 + MIR3 SINE MIR 119 195 -13 * 1114 203 40 84 chr5 140340334 140340762 -59289388 - MER39 LTR ERV1 -42 665 257 246 201 21 22 chr5 140340733 140340831 -59289319 - MER39 LTR ERV1 -544 100 5 * 330 386 18 35 chr5 140340979 140341207 -59288943 - L2 LINE L2 -143 3129 2906 248 321 37 18 chr5 140341281 140341390 -59288760 - L2 LINE L2 -529 2785 2675 855 179 42 33 chr5 140342504 140342744 -59287406 + L1 LINE L1 4142 4383 -1763 1230 281 59 63 chr5 140342753 140343750 -59286400 + L1M3e LINE L1 24 1037 -6452 538 254 110 25 chr5 140343933 140344169 -59285981 + L1M3e LINE L1 2275 2530 -4959 1814 149 147 14 chr5 140344169 140344537 -59285613 - MSTA LTR MaLR 0 428 12 3073 261 37 11 chr5 140344543 140345725 -59284425 + L1MA6 LINE L1 2210 3422 -4143 37499 77 9 6 chr5 140345737 140351854 -59278296 + L1PA6 LINE L1 11 6143 -11 10850 176 31 27 chr5 140351858 140352900 -59277250 + L1MA6 LINE L1 3412 4448 -3271 1736 177 6 25 chr5 140352900 140353217 -59276933 + AluJb SINE Alu 1 311 -1 10850 176 31 27 chr5 140353217 140355944 -59274206 + L1MA6 LINE L1 4448 7205 -514 305 111 31 68 chr5 140356019 140356181 -59273969 + (TA)n Simple_repeat Simple_repeat 1 156 0 2627 147 31 20 chr5 140356181 140356691 -59273459 + L1MA6 LINE L1 7201 7716 -3 4796 166 34 41 chr5 140356708 140358138 -59272012 + L1MA9 LINE L1 4360 5798 -514 1786 133 25 83 chr5 140358138 140358536 -59271614 + THE1C LTR MaLR 1 375 0 4796 166 34 41 chr5 140358536 140358580 -59271570 + L1MA9 LINE L1 5798 5841 -471 1605 203 0 35 chr5 140358580 140358896 -59271254 + AluJo SINE Alu 1 305 -7 4796 166 34 41 chr5 140358896 140359111 -59271039 + L1MA9 LINE L1 5841 6056 -256 1874 166 7 10 chr5 140359111 140359413 -59270737 - AluJo SINE Alu -11 301 1 4796 166 34 41 chr5 140359413 140359665 -59270485 + L1MA9 LINE L1 6056 6303 -9 469 219 152 0 chr5 140362501 140362606 -59267544 - FLAM_A SINE Alu -12 121 1 1768 183 32 96 chr5 140362903 140363401 -59266749 - MER31B LTR ERV1 0 466 1 403 322 86 7 chr5 140363440 140363592 -59266558 - MIR SINE MIR -96 166 3 247 196 107 0 chr5 140363661 140363717 -59266433 - MIR SINE MIR 0 262 201 654 191 76 0 chr5 140363805 140363936 -59266214 - MER5A DNA MER1_type -47 142 2 228 330 37 18 chr5 140364034 140364143 -59266007 - MIR SINE MIR -132 130 20 1113 219 59 24 chr5 140364358 140364739 -59265411 + LTR48 LTR ERV1 1 368 -419 2054 134 42 28 chr5 140364739 140365098 -59265052 - THE1B LTR MaLR 0 364 1 1113 219 59 24 chr5 140365098 140365245 -59264905 + LTR48 LTR ERV1 368 739 -48 988 160 0 24 chr5 140365491 140365660 -59264490 - FRAM SINE Alu -10 166 2 315 345 28 5 chr5 140366107 140366270 -59263880 + MIR SINE MIR 20 183 -65 410 296 17 9 chr5 140367354 140367469 -59262681 - L2 LINE L2 -11 3302 3187 246 105 0 0 chr5 140368206 140368244 -59261906 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 35 0 0 chr5 140368592 140368621 -59261529 + AT_rich Low_complexity Low_complexity 1 29 0 776 205 27 5 chr5 140370713 140370898 -59259252 - MER5A DNA MER1_type 0 189 1 412 285 155 26 chr5 140370955 140371148 -59259002 - L2 LINE L2 -660 2654 2437 227 159 116 0 chr5 140421868 140421937 -59208213 - L1M4 LINE L1 -1446 4700 4624 346 284 26 9 chr5 140422946 140423062 -59207088 + MER94 DNA DNA 8 125 -9 218 242 61 0 chr5 140424437 140424503 -59205647 + MIR3 SINE MIR 123 192 -16 2041 174 31 18 chr5 140424933 140425324 -59204826 + MSTD LTR MaLR 1 396 0 189 289 22 0 chr5 140425722 140425767 -59204383 - MIR SINE MIR -161 101 56 195 409 16 0 chr5 140426229 140426356 -59203794 - MIR3 SINE MIR -8 200 72 237 33 0 0 chr5 140427483 140427513 -59202637 + (T)n Simple_repeat Simple_repeat 1 30 0 710 254 76 0 chr5 140429942 140430139 -59200011 - MIR SINE MIR -49 213 2 702 253 74 41 chr5 140431652 140431921 -59198229 + L2 LINE L2 3001 3278 -35 382 191 43 11 chr5 140431991 140432085 -59198065 + MER88 LTR ERVL 81 177 -287 * 986 258 62 28 chr5 140432001 140432354 -59197796 - MER74A LTR ERVL -70 488 124 14662 128 18 19 chr5 140432785 140433836 -59196314 + Tigger1 DNA MER2_type 1 1052 -1366 411 21 0 0 chr5 140433836 140433884 -59196266 + (TAG)n Simple_repeat Simple_repeat 2 49 0 14662 128 18 19 chr5 140433884 140435253 -59194897 + Tigger1 DNA MER2_type 1052 2418 0 1700 222 125 0 chr5 140437077 140437518 -59192632 - MLT1D LTR MaLR -7 498 3 190 293 45 45 chr5 140437639 140437772 -59192378 + L2 LINE L2 1865 1997 -1317 312 284 34 54 chr5 140437778 140437926 -59192224 - MIR SINE MIR 0 262 118 2263 61 30 3 chr5 140437959 140438254 -59191896 - AluY SINE Alu -8 303 1 365 292 50 71 chr5 140438408 140438585 -59191565 + L2 LINE L2 2442 2614 -700 1701 196 36 0 chr5 140438585 140438921 -59191229 + MER7A DNA MER2_type 1 346 0 365 292 50 71 chr5 140438921 140438983 -59191167 + L2 LINE L2 2614 2676 -638 27 92 0 0 chr5 140439243 140439319 -59190831 + AT_rich Low_complexity Low_complexity 1 76 0 387 237 8 53 chr5 140439382 140439513 -59190637 + L1ME4a LINE L1 5560 5684 -437 1317 148 24 142 chr5 140439586 140439918 -59190232 + AluJo SINE Alu 2 294 -8 337 269 176 0 chr5 140439931 140440050 -59190100 + L1ME4a LINE L1 5724 5863 -258 20738 182 35 21 chr5 140440050 140446108 -59184042 + L1PA10 LINE L1 1 6147 -336 2535 116 8 0 chr5 140446108 140446469 -59183681 - THE1B LTR MaLR 0 364 1 20738 182 35 21 chr5 140446469 140446673 -59183477 + L1PA10 LINE L1 6147 6347 -136 1777 154 49 35 chr5 140446716 140447086 -59183064 + THE1C LTR MaLR 1 375 0 366 270 0 60 chr5 140447220 140447320 -59182830 + MIR SINE MIR 22 115 -147 851 277 129 49 chr5 140447763 140448312 -59181838 - MLT1E LTR MaLR 0 593 1 601 259 64 95 chr5 140448312 140448733 -59181417 - MLT1E-int LTR MaLR 0 1371 964 404 282 41 41 chr5 140448845 140449040 -59181110 - MLT1E-int LTR MaLR -485 886 692 935 267 26 8 chr5 140449256 140449733 -59180417 - MLT1E-int LTR MaLR -769 602 1 1554 223 104 56 chr5 140449733 140450272 -59179878 - MLT1E LTR MaLR 0 593 29 188 336 47 17 chr5 140451030 140451180 -59178970 + MIR SINE MIR 46 258 -4 361 283 59 87 chr5 140451233 140451452 -59178698 + MIR SINE MIR 45 257 -5 21 0 0 0 chr5 140452074 140452095 -59178055 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr5 140453188 140453225 -59176925 + (TG)n Simple_repeat Simple_repeat 2 38 0 1468 136 191 13 chr5 140453243 140453552 -59176598 + MSTA LTR MaLR 1 364 -64 2384 60 0 0 chr5 140453552 140453851 -59176299 - L1PA5 LINE L1 -4 6150 5852 3424 36 0 14 chr5 140453851 140454291 -59175859 + L1P2 LINE L1 5374 5807 -347 549 65 26 0 chr5 140454291 140454368 -59175782 + MSTA LTR MaLR 350 428 0 7796 149 6 43 chr5 140454372 140455999 -59174151 + MSTA-int LTR MaLR 5 1580 0 1907 149 147 5 chr5 140455999 140456374 -59173776 + MSTA LTR MaLR 1 428 0 1341 176 12 4 chr5 140456506 140456750 -59173400 + MLT1A1 LTR MaLR 120 365 0 617 283 61 19 chr5 140458005 140458315 -59171835 + MLT1G LTR MaLR 5 284 -306 459 255 6 61 chr5 140458387 140458549 -59171601 + MLT1G LTR MaLR 400 578 -12 1343 196 151 0 chr5 140458549 140458866 -59171284 + MLT1A1 LTR MaLR 1 365 0 459 255 6 61 chr5 140458866 140458879 -59171271 + MLT1G LTR MaLR 578 590 0 726 266 31 0 chr5 140458884 140459076 -59171074 - MLT1B LTR MaLR 0 390 193 180 200 0 0 chr5 140459087 140459132 -59171018 + GA-rich Low_complexity Low_complexity 1 45 0 557 256 6 28 chr5 140459150 140459326 -59170824 - MLT1B LTR MaLR -202 172 1 429 297 35 14 chr5 140459327 140459472 -59170678 + MIR SINE MIR 45 192 -70 2095 127 0 0 chr5 140459694 140459978 -59170172 + AluSx SINE Alu 1 284 -28 584 14 14 0 chr5 140459984 140460057 -59170093 + (CATAA)n Simple_repeat Simple_repeat 2 75 0 264 240 48 32 chr5 140460696 140460821 -59169329 + L1ME4a LINE L1 5929 6055 -66 460 261 18 9 chr5 140461140 140461251 -59168899 + L2 LINE L2 3146 3257 -15 2412 167 75 17 chr5 140461268 140461747 -59168403 - MLT2B2 LTR ERVL -8 507 1 457 208 42 0 chr5 140461869 140461965 -59168185 + MER81 DNA DNA 15 114 0 922 199 125 7 chr5 140462593 140462874 -59167276 + MER5C DNA MER1_type 9 322 -2 234 0 0 0 chr5 140463458 140463484 -59166666 + (TG)n Simple_repeat Simple_repeat 2 27 0 190 259 103 0 chr5 140464036 140464094 -59166056 + MIR SINE MIR 104 167 -95 387 188 40 0 chr5 140464343 140464444 -59165706 + L1MC1 LINE L1 5189 5293 -853 1023 146 0 0 chr5 140464446 140464590 -59165560 + AluJb SINE Alu 87 230 -82 827 168 6 0 chr5 140464615 140464782 -59165368 + GA-rich Low_complexity Low_complexity 2 169 0 5156 168 23 17 chr5 140464796 140465177 -59164973 + L1MC1 LINE L1 5286 5663 -670 435 38 0 0 chr5 140465177 140465230 -59164920 + (CA)n Simple_repeat Simple_repeat 2 54 0 5156 168 23 17 chr5 140465230 140465886 -59164264 + L1MC1 LINE L1 5663 6329 -4 225 0 0 0 chr5 140466897 140466922 -59163228 + (CA)n Simple_repeat Simple_repeat 2 26 0 1141 267 61 31 chr5 140469140 140469751 -59160399 - L1MC4 LINE L1 -142 7900 7272 362 186 0 29 chr5 140469782 140469852 -59160298 + MLT1D LTR MaLR 2 69 -436 1366 186 4 22 chr5 140469900 140470175 -59159975 + MLT1D LTR MaLR 235 504 -1 980 265 55 33 chr5 140470184 140470640 -59159510 - L1MC4 LINE L1 -795 7247 6782 451 168 117 50 chr5 140470674 140470853 -59159297 - L1MC4 LINE L1 -2364 5444 5254 401 314 103 12 chr5 140470864 140471106 -59159044 - L1MC4 LINE L1 -904 5242 4979 258 283 64 32 chr5 140471127 140471314 -59158836 - L1MC4 LINE L1 -1219 4927 4735 519 206 37 111 chr5 140471678 140471867 -59158283 + MER5B DNA MER1_type 4 178 0 259 337 30 4 chr5 140471964 140472231 -59157919 - L1MC4 LINE L1 -3682 2464 2191 2492 84 7 0 chr5 140472240 140472549 -59157601 - AluY SINE Alu 0 311 1 423 317 77 56 chr5 140472946 140473307 -59156843 - L1MEd LINE L1 -1028 1271 16 24 0 0 0 chr5 140473768 140473792 -59156358 + AT_rich Low_complexity Low_complexity 1 24 0 331 364 7 21 chr5 140474507 140474647 -59155503 - MIR3 SINE MIR -69 139 2 203 351 60 30 chr5 140475331 140475499 -59154651 + L3 LINE CR1 529 701 -876 2018 125 0 74 chr5 140475504 140475841 -59154309 + AluSx SINE Alu 1 312 0 193 359 19 10 chr5 140475876 140475979 -59154171 + L3 LINE CR1 890 993 -584 642 329 120 3 chr5 140476028 140476344 -59153806 + L3 LINE CR1 1096 1448 -129 197 261 78 40 chr5 140476493 140476615 -59153535 - MER5B DNA MER1_type 0 178 59 22 35 0 0 chr5 140476615 140476644 -59153506 + AT_rich Low_complexity Low_complexity 1 29 0 374 304 93 97 chr5 140476649 140477671 -59152479 - L2 LINE L2 0 3272 2254 22 35 0 0 chr5 140477750 140477779 -59152371 + AT_rich Low_complexity Low_complexity 1 29 0 245 98 24 0 chr5 140478676 140478717 -59151433 + (TATG)n Simple_repeat Simple_repeat 3 44 0 214 147 0 0 chr5 140479515 140479549 -59150601 + (TG)n Simple_repeat Simple_repeat 2 35 0 4861 109 21 101 chr5 140479584 140481102 -59149048 + pTR5 LTR ERV1 741 2606 0 242 255 0 0 chr5 140481189 140481236 -59148914 + polypyrimidine Low_complexity Low_complexity 3 49 0 381 209 55 11 chr5 140481252 140481343 -59148807 - MER58 DNA MER1_type -120 95 1 610 319 113 34 chr5 140481608 140481953 -59148197 - L2 LINE L2 0 3313 2928 1980 167 25 8 chr5 140481953 140482312 -59147838 + MLT1A1 LTR MaLR 1 365 0 610 319 113 34 chr5 140482312 140482380 -59147770 - L2 LINE L2 -385 2928 2867 * 1817 243 132 34 chr5 140482372 140482628 -59147522 - L2 LINE L2 -579 2735 2505 4965 110 22 23 chr5 140482628 140483408 -59146742 - MER4E LTR ERV1 0 779 1 1817 243 132 34 chr5 140483408 140483796 -59146354 - L2 LINE L2 -809 2505 2028 2355 109 0 10 chr5 140484455 140484768 -59145382 - AluSx SINE Alu -2 310 1 790 232 164 67 chr5 140486231 140486687 -59143463 + MLT1E2 LTR MaLR 37 559 -65 1939 56 0 9 chr5 140486719 140486951 -59143199 + AluY SINE Alu 1 230 -81 2244 89 6 0 chr5 140486961 140487287 -59142863 - L1P LINE L1 -4366 1780 1453 * 4077 146 23 0 chr5 140487277 140487941 -59142209 - L1P LINE L1 -5465 681 3 24 67 0 0 chr5 140488112 140488157 -59141993 + AT_rich Low_complexity Low_complexity 1 45 0 716 343 80 45 chr5 140488668 140489402 -59140748 + L2 LINE L2 2218 2977 -337 335 376 20 0 chr5 140489518 140489667 -59140483 + L2 LINE L2 3161 3312 -1 356 322 78 20 chr5 140489670 140489915 -59140235 - L1ME4a LINE L1 -260 5861 5603 565 258 24 55 chr5 140490034 140490325 -59139825 + L1MEc LINE L1 20 301 -6122 1571 169 17 3 chr5 140490331 140490627 -59139523 + MER49 LTR ERV1 8 307 -616 3753 129 73 5 chr5 140490631 140491204 -59138946 + LTR9 LTR ERV1 1 612 0 10283 152 34 20 chr5 140491207 140492926 -59137224 + HUERS-P3 LTR ERV1 4 1605 -5813 261 0 0 0 chr5 140492926 140492955 -59137195 + (TTG)n Simple_repeat Simple_repeat 2 30 0 10283 152 34 20 chr5 140492955 140493508 -59136642 + HUERS-P3 LTR ERV1 1605 2149 -5269 13633 42 69 4 chr5 140493509 140495367 -59134783 - L1PA2 LINE L1 -3805 2341 363 * 24412 27 0 0 chr5 140495362 140499237 -59130913 + L1PA2 LINE L1 2322 6197 0 3545 90 2 4 chr5 140499237 140499735 -59130415 + HUERS-P3 LTR ERV1 2146 2642 -4776 1933 206 30 18 chr5 140499735 140500171 -59129979 - LTR8 LTR ERV1 -250 441 1 7500 160 108 50 chr5 140500172 140502052 -59128098 + MER57-int LTR ERV1 2399 4386 -3151 4709 100 44 0 chr5 140502153 140502875 -59127275 + MER57-int LTR ERV1 5293 6046 -1372 4526 250 38 46 chr5 140503836 140504876 -59125274 + L1M4 LINE L1 2886 3933 -2213 1459 234 6 0 chr5 140504876 140505223 -59124927 + L1PB4 LINE L1 5820 6168 0 4526 250 38 46 chr5 140505223 140506278 -59123872 + L1M4 LINE L1 3933 5008 -1138 524 283 66 36 chr5 140506290 140506654 -59123496 + L1MEc LINE L1 2118 2492 -4630 1665 175 50 25 chr5 140506714 140507074 -59123076 + L1PA13 LINE L1 5783 6151 -12 7881 126 19 22 chr5 140507133 140508332 -59121818 - HSMAR2 DNA Mariner -10 1292 96 1986 93 21 3 chr5 140508332 140508621 -59121529 + AluY SINE Alu 1 294 -17 7881 126 19 22 chr5 140508621 140508712 -59121438 - HSMAR2 DNA Mariner -1206 96 6 243 0 0 0 chr5 140508712 140508739 -59121411 + (TG)n Simple_repeat Simple_repeat 1 27 0 2553 61 0 0 chr5 140508855 140509166 -59120984 + AluY SINE Alu 1 311 0 5018 148 36 21 chr5 140509228 140509643 -59120507 + L1MA7 LINE L1 5150 5557 -734 1810 132 19 62 chr5 140509643 140510014 -59120136 - THE1A LTR MaLR 0 355 1 5018 148 36 21 chr5 140510014 140510663 -59119487 + L1MA7 LINE L1 5557 6230 -61 22 0 0 0 chr5 140510663 140510685 -59119465 + AT_rich Low_complexity Low_complexity 1 22 0 1666 184 28 33 chr5 140510857 140511249 -59118901 + MLT1B LTR MaLR 1 390 0 307 178 37 9 chr5 140511324 140511431 -59118719 + CT-rich Low_complexity Low_complexity 1 110 0 27 62 0 0 chr5 140511541 140511589 -59118561 + AT_rich Low_complexity Low_complexity 1 48 0 27 0 0 0 chr5 140511767 140511794 -59118356 + AT_rich Low_complexity Low_complexity 1 27 0 1047 151 60 0 chr5 140513569 140513754 -59116396 - MER47A DNA MER2_type -169 197 2 1560 264 80 39 chr5 140513757 140514176 -59115974 - L1M4 LINE L1 -4842 1700 1300 6342 103 3 0 chr5 140514176 140515308 -59114842 - L1PA13 LINE L1 0 6163 5030 1560 264 80 39 chr5 140515308 140515729 -59114421 - L1M4 LINE L1 -5242 1300 875 228 242 10 8 chr5 140519086 140519183 -59110967 - MIR SINE MIR 0 262 83 183 250 0 0 chr5 140519771 140519807 -59110343 + MIR SINE MIR 91 126 -136 196 246 62 0 chr5 140519833 140519898 -59110252 - MIR SINE MIR -11 251 183 314 364 34 34 chr5 140520394 140520570 -59109580 + L3 LINE CR1 1242 1417 -160 427 321 46 54 chr5 140520805 140521045 -59109105 + MIR SINE MIR 15 252 -10 353 240 30 0 chr5 140522020 140522120 -59108030 - MER114 LTR ERV -105 543 441 362 216 35 43 chr5 140522167 140522283 -59107867 - L1MC4 LINE L1 -10 8032 7918 271 281 11 11 chr5 140522286 140522375 -59107775 + CT-rich Low_complexity Low_complexity 1 89 0 1058 250 36 24 chr5 140522375 140522711 -59107439 - L1MC4 LINE L1 -149 7893 7554 1035 227 58 36 chr5 140522754 140523119 -59107031 - MER114 LTR ERV -243 405 33 316 82 0 0 chr5 140523296 140523345 -59106805 - MER57B LTR ERV1 0 434 386 2234 119 20 31 chr5 140523445 140523797 -59106353 - MER57B LTR ERV1 -86 348 1 23 0 0 0 chr5 140524449 140524472 -59105678 + AT_rich Low_complexity Low_complexity 1 23 0 2049 168 9 12 chr5 140524612 140524697 -59105453 - MER2 DNA MER2_type 0 345 261 4728 62 5 0 chr5 140524697 140525297 -59104853 + L1PA8 LINE L1 5564 6166 -6 2049 168 9 12 chr5 140525297 140525557 -59104593 - MER2 DNA MER2_type -84 261 1 751 244 134 25 chr5 140526224 140526499 -59103651 - L2 LINE L2 -6 3307 3003 219 196 0 22 chr5 140527458 140527504 -59102646 - L2 LINE L2 0 3313 3269 213 250 125 12 chr5 140530088 140530168 -59099982 + MIR SINE MIR 100 188 -74 23 0 0 0 chr5 140530197 140530220 -59099930 + AT_rich Low_complexity Low_complexity 1 23 0 333 326 29 40 chr5 140530505 140530680 -59099470 + MIR3 SINE MIR 31 203 -5 1715 163 7 3 chr5 140530920 140531209 -59098941 + MSTD-int LTR MaLR 1437 1726 -9 991 236 105 48 chr5 140531220 140531593 -59098557 + MSTD LTR MaLR 3 396 0 758 285 16 5 chr5 140531593 140531742 -59098408 - MER58A DNA MER1_type -2225 195 42 2204 102 3 0 chr5 140531742 140532036 -59098114 + AluSp SINE Alu 1 295 -18 758 285 16 5 chr5 140532036 140532079 -59098071 - MER58A DNA MER1_type -2378 42 1 1976 125 4 4 chr5 140532491 140532816 -59097334 - AluSg SINE Alu 0 325 1 14416 177 41 10 chr5 140533058 140535140 -59095010 - L1MA4 LINE L1 -6 7713 5697 2192 111 3 3 chr5 140535140 140535447 -59094703 - AluSc SINE Alu -2 307 1 14416 177 41 10 chr5 140535447 140537516 -59092634 - L1MA4 LINE L1 -2022 5697 3428 315 341 43 33 chr5 140538063 140538274 -59091876 - L1MEc LINE L1 -4312 2409 2197 694 295 40 13 chr5 140538296 140538721 -59091429 - L1MEc LINE L1 -4453 2087 1637 1528 280 46 40 chr5 140539238 140539781 -59090369 - MLT1E LTR MaLR -5 588 43 528 290 27 85 chr5 140539821 140540114 -59090036 - Charlie8 DNA MER1_type -2141 276 1 2151 119 0 0 chr5 140540427 140540720 -59089430 + AluSx SINE Alu 1 293 -19 278 337 22 0 chr5 140540860 140540952 -59089198 - L2 LINE L2 0 3272 3179 2765 126 24 5 chr5 140541196 140541616 -59088534 - MSTA LTR MaLR 0 428 1 846 271 40 74 chr5 140541639 140541970 -59088180 - MLT1I LTR MaLR -9 400 98 250 218 40 50 chr5 140542558 140542659 -59087491 + LTR33A LTR ERVL 420 519 -4 302 283 67 33 chr5 140542672 140542716 -59087434 + HAL1b LINE L1 548 589 -759 2141 82 0 0 chr5 140542716 140542985 -59087165 - AluSx SINE Alu -3 309 41 302 283 67 33 chr5 140542985 140543069 -59087081 + HAL1b LINE L1 589 669 -679 2176 120 3 3 chr5 140543069 140543377 -59086773 + AluSq SINE Alu 1 308 -5 302 283 67 33 chr5 140543377 140543487 -59086663 + HAL1b LINE L1 669 795 -553 23 33 0 0 chr5 140543510 140543540 -59086610 + AT_rich Low_complexity Low_complexity 1 30 0 646 211 77 13 chr5 140543540 140543696 -59086454 + L2 LINE L2 3146 3311 -2 658 195 146 12 chr5 140546561 140546725 -59083425 - MIR SINE MIR -5 257 72 695 266 75 13 chr5 140547468 140547694 -59082456 + MIR SINE MIR 1 240 -22 25 31 0 0 chr5 140548739 140548771 -59081379 + AT_rich Low_complexity Low_complexity 1 32 0 2298 97 0 0 chr5 140549548 140549846 -59080304 - AluSx SINE Alu -14 298 1 2094 103 31 7 chr5 140550123 140550413 -59079737 - AluSx SINE Alu -14 298 2 22 35 0 0 chr5 140553474 140553503 -59076647 + AT_rich Low_complexity Low_complexity 1 29 0 784 160 57 29 chr5 140555087 140555184 -59074966 - LTR49 LTR ERV1 0 595 489 216 0 0 0 chr5 140555184 140555208 -59074942 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 784 160 57 29 chr5 140555208 140555285 -59074865 - LTR49 LTR ERV1 -106 489 416 * 946 150 198 10 chr5 140555279 140555607 -59074543 - LTR29 LTR ERV1 -198 424 1 1583 281 79 14 chr5 140556013 140556568 -59073582 + MLT2E LTR ERVL 24 614 -14 184 398 19 10 chr5 140557478 140557581 -59072569 + L2 LINE L2 3169 3272 0 27 0 0 0 chr5 140558170 140558197 -59071953 + AT_rich Low_complexity Low_complexity 1 27 0 370 263 112 39 chr5 140559941 140560084 -59070066 + L2 LINE L2 2596 2756 -558 2449 7 0 7 chr5 140560084 140560354 -59069796 + AluYb8 SINE Alu 39 306 -12 370 263 112 39 chr5 140560354 140560389 -59069761 + L2 LINE L2 2756 2787 -527 576 350 44 34 chr5 140560542 140560925 -59069225 + LTR33 LTR ERVL 1 387 -134 1219 220 57 102 chr5 140560959 140561500 -59068650 + L1MC4 LINE L1 7464 7980 -62 211 284 27 27 chr5 140561824 140561898 -59068252 + L2 LINE L2 3178 3251 -21 1395 168 13 38 chr5 140562024 140562340 -59067810 + MER33 DNA MER1_type 17 324 0 489 237 164 13 chr5 140562468 140562620 -59067530 - MER5A DNA MER1_type -6 183 9 347 343 12 6 chr5 140565626 140565792 -59064358 + GA-rich Low_complexity Low_complexity 2 168 0 230 208 0 57 chr5 140565898 140565951 -59064199 + L2 LINE L2 3223 3272 0 605 328 45 27 chr5 140566142 140566637 -59063513 + L1ME3A LINE L1 5423 5925 -273 1104 318 80 8 chr5 140567123 140567500 -59062650 - MER115 DNA AcHobo 0 693 290 1388 181 85 34 chr5 140567753 140568106 -59062044 + MLT1A2 LTR MaLR 4 374 0 1694 167 33 0 chr5 140568151 140568426 -59061724 + AluJo SINE Alu 9 292 -20 404 274 73 16 chr5 140569948 140570072 -59060078 - L2 LINE L2 0 3272 3142 479 277 112 53 chr5 140571190 140571396 -59058754 + MIR SINE MIR 45 262 0 181 350 70 40 chr5 140571481 140571581 -59058569 - L2 LINE L2 -16 3256 3154 783 209 50 45 chr5 140571800 140572020 -59058130 - MLT1K LTR MaLR -9 579 359 1191 256 113 14 chr5 140572575 140572939 -59057211 - MLT1G1 LTR MaLR -2 593 194 498 286 43 0 chr5 140573667 140573852 -59056298 - L1ME4a LINE L1 -252 5869 5677 1558 184 108 69 chr5 140573920 140574356 -59055794 - MLT1D LTR MaLR -5 500 48 872 363 4 34 chr5 140574503 140574968 -59055182 + L1M3a LINE L1 1532 1982 -5504 3620 233 50 27 chr5 140575704 140576481 -59053669 + L1M3a LINE L1 1912 2670 -4895 2197 114 3 7 chr5 140576481 140576788 -59053362 + AluSq SINE Alu 1 306 -7 3620 233 50 27 chr5 140576788 140576935 -59053215 + L1M3a LINE L1 2670 2812 -4753 210 37 0 0 chr5 140576935 140576962 -59053188 + (CAA)n Simple_repeat Simple_repeat 2 28 0 3620 233 50 27 chr5 140576962 140577123 -59053027 + L1M3a LINE L1 2812 3023 -4542 4836 195 34 16 chr5 140577137 140578602 -59051548 + L1M3a LINE L1 3098 4590 -2975 3510 130 11 33 chr5 140578607 140578981 -59051169 + L1MA4 LINE L1 5677 6033 -267 2357 100 0 0 chr5 140578981 140579290 -59050860 + AluSg SINE Alu 1 309 -1 3510 130 11 33 chr5 140579290 140579546 -59050604 + L1MA4 LINE L1 6033 6293 -7 234 270 32 0 chr5 140580155 140580218 -59049932 + MER5B DNA MER1_type 28 92 -86 871 224 18 46 chr5 140580241 140580460 -59049690 + MER20 DNA MER1_type 7 219 0 326 253 179 19 chr5 140580730 140580886 -59049264 - MIR SINE MIR -44 218 41 10325 236 134 25 chr5 140581915 140585140 -59045010 - L1PA15 LINE L1 0 6816 2712 4214 97 37 17 chr5 140585140 140585793 -59044357 - L1MA1 LINE L1 -4 6298 5633 10325 236 134 25 chr5 140585793 140587581 -59042569 - L1PA15 LINE L1 -4104 2712 1120 913 195 0 68 chr5 140588959 140589149 -59041001 + MER63A DNA MER1_type 1 177 -33 203 65 43 43 chr5 140589939 140589985 -59040165 + (TATTG)n Simple_repeat Simple_repeat 2 47 0 257 167 36 12 chr5 140589999 140590083 -59040067 + (TATATG)n Simple_repeat Simple_repeat 3 88 0 326 234 36 72 chr5 140590497 140590608 -59039542 + MER94 DNA DNA 8 114 -20 421 255 273 9 chr5 140590965 140591181 -59038969 - L2 LINE L2 -840 2474 2202 2076 215 29 42 chr5 140591199 140591794 -59038356 + L1M3a LINE L1 5236 5822 -1743 497 248 0 0 chr5 140591801 140591902 -59038248 + Tigger3b DNA MER2_type 1 101 -1130 1647 135 15 4 chr5 140591903 140592170 -59037980 + Tigger3b DNA MER2_type 276 545 -686 452 42 73 0 chr5 140592210 140592306 -59037844 + (TA)n Simple_repeat Simple_repeat 1 103 0 5999 170 48 21 chr5 140592336 140592421 -59037729 - L1MA4A LINE L1 -181 6824 6743 2459 84 0 0 chr5 140592421 140592720 -59037430 - AluY SINE Alu -12 299 1 5999 170 48 21 chr5 140592720 140594601 -59035549 - L1MA4A LINE L1 -262 6743 4816 1229 229 69 96 chr5 140594605 140595054 -59035096 + MLT2B3 LTR ERVL 118 554 0 6962 207 32 13 chr5 140595060 140597389 -59032761 - L1MA4A LINE L1 -2038 4810 2526 2158 151 5 13 chr5 140597389 140597767 -59032383 - THE1C LTR MaLR 0 375 1 9860 128 46 5 chr5 140597767 140599285 -59030865 - THE1C-int LTR MaLR 0 1580 1 2430 129 13 5 chr5 140599285 140599657 -59030493 - THE1C LTR MaLR 0 375 1 6962 207 32 13 chr5 140599657 140601023 -59029127 - L1MA4A LINE L1 -4321 2527 912 5014 185 50 12 chr5 140601040 140602213 -59027937 + L1MC2 LINE L1 5095 6320 -24 3724 282 96 20 chr5 140602258 140603559 -59026591 - L2 LINE L2 -1121 2193 775 1305 166 22 124 chr5 140603559 140603963 -59026187 - MLT1A1 LTR MaLR 0 365 3 3724 282 96 20 chr5 140603963 140604074 -59026076 - L2 LINE L2 -2539 775 674 317 43 43 0 chr5 140607095 140607141 -59023009 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 28 61 0 0 chr5 140607510 140607559 -59022591 + AT_rich Low_complexity Low_complexity 1 49 0 660 319 56 7 chr5 140607785 140608070 -59022080 - MLT1K LTR MaLR -164 424 126 23 33 0 0 chr5 140608169 140608199 -59021951 + AT_rich Low_complexity Low_complexity 1 30 0 327 146 0 0 chr5 140611112 140611167 -59018983 + (TTCTCC)n Simple_repeat Simple_repeat 3 57 0 209 176 0 0 chr5 140614121 140614155 -59015995 + GA-rich Low_complexity Low_complexity 2 35 0 23 0 0 0 chr5 140616636 140616659 -59013491 + AT_rich Low_complexity Low_complexity 1 23 0 377 319 51 22 chr5 140617414 140617552 -59012598 - L2 LINE L2 -12 3260 3119 2029 165 25 37 chr5 140618415 140618816 -59011334 - MSTD LTR MaLR 0 396 1 2438 94 0 0 chr5 140619033 140619340 -59010810 + AluSg SINE Alu 1 307 -3 360 0 0 0 chr5 140620292 140620332 -59009818 + (CA)n Simple_repeat Simple_repeat 2 41 0 1067 223 47 72 chr5 140620848 140621315 -59008835 - MER39 LTR ERV1 -41 666 1 21 0 0 0 chr5 140622029 140622050 -59008100 + AT_rich Low_complexity Low_complexity 1 21 0 694 196 16 11 chr5 140623085 140623269 -59006881 - MER53 DNA DNA -3 186 2 223 309 24 98 chr5 140623928 140624051 -59006099 - MER5A DNA MER1_type 0 189 76 22 35 0 0 chr5 140624176 140624205 -59005945 + AT_rich Low_complexity Low_complexity 1 29 0 1630 166 0 4 chr5 140624289 140624548 -59005602 - AluJo SINE Alu -18 294 37 668 195 9 163 chr5 140624813 140625028 -59005122 + MER5A DNA MER1_type 2 183 -6 216 0 0 0 chr5 140625450 140625474 -59004676 + (CA)n Simple_repeat Simple_repeat 2 25 0 291 237 31 93 chr5 140625676 140625773 -59004377 + L2 LINE L2 3182 3272 0 225 0 0 0 chr5 140625882 140625907 -59004243 + (A)n Simple_repeat Simple_repeat 1 25 0 227 299 0 0 chr5 140626491 140626578 -59003572 - L1MCc LINE L1 -4961 1462 1376 800 259 86 50 chr5 140627235 140627589 -59002561 + HAL1b LINE L1 718 1058 -290 258 32 0 0 chr5 140627589 140627620 -59002530 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1654 119 68 58 chr5 140627622 140627900 -59002250 - AluY SINE Alu -30 281 1 800 259 86 50 chr5 140627900 140628084 -59002066 + HAL1b LINE L1 1058 1286 -62 2403 162 60 2 chr5 140628084 140628516 -59001634 + MSTB2 LTR MaLR 1 457 0 800 259 86 50 chr5 140628516 140628575 -59001575 + HAL1b LINE L1 1286 1341 -7 292 319 25 42 chr5 140628643 140628762 -59001388 + L2 LINE L2 3144 3260 -12 278 390 30 0 chr5 140628808 140628972 -59001178 - MIR SINE MIR -89 173 5 2292 241 71 28 chr5 140629935 140630958 -58999192 + L1MC/D LINE L1 2254 3320 -2826 29 78 0 0 chr5 140630974 140631038 -58999112 + AT_rich Low_complexity Low_complexity 1 64 0 1507 247 64 0 chr5 140631088 140631606 -58998544 + L1MC/D LINE L1 3497 4047 -2099 1250 145 0 26 chr5 140632145 140632373 -58997777 + AluSg/x SINE Alu 85 306 -6 299 279 19 0 chr5 140633088 140633192 -58996958 + L1MC/D LINE L1 5704 5809 -1999 13572 135 50 3 chr5 140633637 140635946 -58994204 - Tigger1 DNA MER2_type -2 2416 1 328 321 45 0 chr5 140636131 140636243 -58993907 + MIR SINE MIR 95 211 -51 263 122 20 0 chr5 140638579 140638628 -58991522 + GA-rich Low_complexity Low_complexity 1 50 0 493 194 0 19 chr5 140640010 140640118 -58990032 + L1MEc LINE L1 20 125 -6271 270 245 0 0 chr5 140640252 140640305 -58989845 + L2 LINE L2 3250 3302 -11 588 262 119 21 chr5 140640893 140641179 -58988971 + L2 LINE L2 1529 1842 -1472 1474 322 84 19 chr5 140641233 140642069 -58988081 + L2 LINE L2 2156 3042 -271 2134 134 129 5 chr5 140642089 140642470 -58987680 - MSTA LTR MaLR 0 428 1 337 261 133 55 chr5 140642592 140642757 -58987393 + MER5B DNA MER1_type 1 178 0 430 337 53 18 chr5 140642809 140642978 -58987172 + MER5B DNA MER1_type 4 178 0 2294 197 34 94 chr5 140643323 140643962 -58986188 + MER77 LTR ERV1 5 605 0 4337 166 18 32 chr5 140644949 140645787 -58984363 + LTR1B LTR ERV1 1 826 0 1036 190 84 15 chr5 140645818 140646081 -58984069 + MLT1D LTR MaLR 223 503 -2 26 30 0 0 chr5 140648602 140648635 -58981515 + AT_rich Low_complexity Low_complexity 1 33 0 459 0 0 0 chr5 140648771 140648822 -58981328 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 6478 224 30 21 chr5 140651191 140653434 -58976716 + L1MA4 LINE L1 25 2987 -4578 19881 167 28 19 chr5 140653490 140655011 -58975139 + L1PA11 LINE L1 689 2195 -4294 2109 155 0 0 chr5 140655011 140655315 -58974835 - AluSx SINE Alu -8 304 1 19881 167 28 19 chr5 140655315 140657642 -58972508 + L1PA11 LINE L1 2195 4500 -1989 2403 98 0 3 chr5 140657642 140657948 -58972202 + AluY SINE Alu 1 305 -6 19881 167 28 19 chr5 140657948 140658824 -58971326 + L1PA11 LINE L1 4500 5367 -1122 457 88 0 121 chr5 140658824 140658915 -58971235 + MADE1 DNA Mariner 1 80 0 19881 167 28 19 chr5 140658915 140659930 -58970220 + L1PA11 LINE L1 5367 6489 0 7727 191 49 20 chr5 140659926 140661979 -58968171 + L1MA4 LINE L1 2977 4970 -2595 * 369 0 0 0 chr5 140661979 140662020 -58968130 + (CA)n Simple_repeat Simple_repeat 2 42 0 7727 191 49 20 chr5 140662020 140662083 -58968067 + L1MA4 LINE L1 4970 5030 -2535 2202 119 3 0 chr5 140662083 140662385 -58967765 + AluSp SINE Alu 3 305 -8 7727 191 49 20 chr5 140662385 140662601 -58967549 + L1MA4 LINE L1 5030 5381 -2184 6883 151 21 42 chr5 140664201 140666584 -58963566 + L1MA4 LINE L1 5389 7718 -1 22 0 0 0 chr5 140667462 140667484 -58962666 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 140669035 140669055 -58961095 + (CAA)n Simple_repeat Simple_repeat 2 21 0 311 94 0 19 chr5 140670621 140670674 -58959476 + (GGAA)n Simple_repeat Simple_repeat 3 54 0 220 77 0 96 chr5 140670683 140670735 -58959415 + (CGGGA)n Simple_repeat Simple_repeat 5 51 0 237 65 0 0 chr5 140670738 140670769 -58959381 + (GGGGA)n Simple_repeat Simple_repeat 3 33 0 503 263 138 7 chr5 140671237 140671389 -58958761 - MIR3 SINE MIR -7 201 30 2131 118 0 0 chr5 140672630 140672927 -58957223 - AluSc SINE Alu -12 297 1 312 228 38 13 chr5 140673826 140673905 -58956245 + MER5A DNA MER1_type 26 106 -83 395 118 66 20 chr5 140673918 140674070 -58956080 + (TA)n Simple_repeat Simple_repeat 2 160 0 23 54 0 0 chr5 140674070 140674107 -58956043 + AT_rich Low_complexity Low_complexity 1 37 0 343 104 75 35 chr5 140674108 140674281 -58955869 + (TA)n Simple_repeat Simple_repeat 1 180 0 405 65 43 75 chr5 140674307 140674493 -58955657 + (TA)n Simple_repeat Simple_repeat 1 180 0 420 116 50 28 chr5 140674512 140674803 -58955347 + (TA)n Simple_repeat Simple_repeat 1 297 0 21 71 0 0 chr5 140674805 140674847 -58955303 + AT_rich Low_complexity Low_complexity 1 42 0 513 333 61 53 chr5 140675438 140675913 -58954237 - L2 LINE L2 -545 2769 2291 324 193 0 0 chr5 140677199 140677313 -58952837 + (CA)n Simple_repeat Simple_repeat 2 115 0 248 253 48 12 chr5 140677839 140677922 -58952228 + MIR SINE MIR 95 180 -82 411 177 415 7 chr5 140678055 140678202 -58951948 - MIR SINE MIR -49 213 7 367 298 8 50 chr5 140678207 140678328 -58951822 - MIR3 SINE MIR -27 181 66 2147 139 8 19 chr5 140678900 140679259 -58950891 + MER46B DNA MER2_type 5 234 -2 2052 117 3 13 chr5 140681021 140681328 -58948822 - AluSc SINE Alu -5 304 1 758 158 0 24 chr5 140682448 140682575 -58947575 + FLAM_C SINE Alu 1 124 -19 317 387 24 0 chr5 140682722 140682890 -58947260 + L1 LINE L1 3584 3755 -2391 376 329 27 27 chr5 140683004 140683226 -58946924 + L1MC/D LINE L1 37 258 -6138 857 271 49 16 chr5 140683463 140683829 -58946321 + L1MC/D LINE L1 789 1166 -5230 * 2626 259 60 2 chr5 140683822 140684661 -58945489 + L1MC/D LINE L1 2269 3155 -3060 327 259 53 1 chr5 140684661 140684751 -58945399 + AluJ/FRAM SINE Alu 220 302 0 256 156 62 0 chr5 140684753 140684817 -58945333 + GA-rich Low_complexity Low_complexity 3 70 0 2919 253 70 19 chr5 140684827 140685952 -58944198 + L1MC/D LINE L1 3143 4325 -1890 553 244 151 24 chr5 140686232 140686437 -58943713 + MIR SINE MIR 6 236 -26 628 306 150 23 chr5 140686734 140687706 -58942444 + L1MC/D LINE L1 4637 5750 -743 600 282 55 25 chr5 140687755 140687957 -58942193 + MIR SINE MIR 41 248 -14 248 302 0 58 chr5 140687963 140688049 -58942101 + L2 LINE L2 3229 3309 -4 1282 298 35 5 chr5 140688145 140688521 -58941629 + LTR16A LTR ERVL 63 449 -1 22 35 0 0 chr5 140688606 140688635 -58941515 + AT_rich Low_complexity Low_complexity 1 29 0 793 217 40 0 chr5 140688660 140688835 -58941315 - MER96B DNA MER1_type? -234 183 2 326 271 71 0 chr5 140688889 140688974 -58941176 + L2 LINE L2 3223 3313 0 22 70 0 0 chr5 140689064 140689107 -58941043 + AT_rich Low_complexity Low_complexity 1 43 0 23 33 0 0 chr5 140689409 140689439 -58940711 + AT_rich Low_complexity Low_complexity 1 30 0 1993 193 31 78 chr5 140689879 140690460 -58939690 - MLT2B3 LTR ERVL 0 554 1 2529 84 3 0 chr5 140690730 140691064 -58939086 - THE1A LTR MaLR -20 335 1 6781 185 57 53 chr5 140691064 140692709 -58937441 - MST-int LTR MaLR 0 1651 1 2598 88 8 0 chr5 140692709 140693061 -58937089 - THE1A LTR MaLR 0 355 1 1455 104 44 8 chr5 140693089 140693340 -58936810 - L1MA2 LINE L1 0 6304 6045 929 56 8 8 chr5 140693340 140693461 -58936689 - L1MA1 LINE L1 0 6302 6178 5076 175 18 63 chr5 140693461 140695407 -58934743 - L1MA2 LINE L1 -212 7511 5708 * 19764 170 50 15 chr5 140695402 140700052 -58930098 - L1MA2 LINE L1 -2742 4823 12 22 0 0 0 chr5 140701331 140701353 -58928797 + AT_rich Low_complexity Low_complexity 1 22 0 253 241 0 0 chr5 140701600 140701654 -58928496 + MIR SINE MIR 90 143 -119 180 0 0 0 chr5 140702165 140702185 -58927965 + (T)n Simple_repeat Simple_repeat 1 20 0 239 318 59 0 chr5 140703930 140704015 -58926135 - L2 LINE L2 -42 3230 3141 1979 175 3 12 chr5 140705057 140705394 -58924756 - MER1B DNA MER1_type 0 337 4 558 182 25 16 chr5 140705647 140705768 -58924382 - L2 LINE L2 -1 3312 3191 264 260 65 0 chr5 140705829 140705906 -58924244 + L1ME3A LINE L1 4907 4988 -1158 835 328 70 12 chr5 140706088 140706674 -58923476 + L1ME3A LINE L1 5255 5874 -296 1524 172 242 7 chr5 140706878 140707291 -58922859 - LTR54 LTR ERV1 0 510 1 208 147 0 0 chr5 140707463 140707497 -58922653 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 2540 149 17 6 chr5 140708233 140708654 -58921496 + MSTB LTR MaLR 3 375 0 340 131 0 16 chr5 140708876 140708937 -58921213 - MER5A DNA MER1_type -95 94 35 523 274 56 66 chr5 140708968 140709271 -58920879 - HAL1b LINE L1 -740 608 309 257 179 0 18 chr5 140709358 140709414 -58920736 + L1M4 LINE L1 1185 1239 -5303 * 660 258 113 4 chr5 140709410 140709639 -58920511 + L1MA9 LINE L1 6021 6274 -38 26 0 0 0 chr5 140709639 140709665 -58920485 + AT_rich Low_complexity Low_complexity 1 26 0 2047 198 40 98 chr5 140709668 140710314 -58919836 + L1MC1 LINE L1 5189 5871 -462 2382 114 16 26 chr5 140710314 140710691 -58919459 - THE1C LTR MaLR -2 373 1 2047 198 40 98 chr5 140710691 140710723 -58919427 + L1MC1 LINE L1 5871 5903 -430 535 108 0 0 chr5 140710723 140710797 -58919353 - THE1C LTR MaLR -301 74 1 2047 198 40 98 chr5 140710797 140711255 -58918895 + L1MC1 LINE L1 5903 6326 -7 2982 253 62 8 chr5 140711300 140712413 -58917737 + L1M4 LINE L1 1241 2545 -4280 586 210 30 80 chr5 140712408 140712608 -58917542 + MLT1C-int LTR MaLR 1541 1730 -5 * 887 270 76 49 chr5 140712619 140713064 -58917086 + MLT1C LTR MaLR 6 462 -5 3137 224 22 11 chr5 140713068 140713920 -58916230 + L1M4 LINE L1 2663 3524 -3120 596 239 84 0 chr5 140714047 140714202 -58915948 - MIR SINE MIR -56 206 39 436 246 33 8 chr5 140714300 140714422 -58915728 + Cheshire DNA MER1_type 30 154 -2266 1073 182 25 0 chr5 140714441 140714644 -58915506 + Cheshire DNA MER1_type 1378 1585 -835 294 355 26 59 chr5 140714664 140715089 -58915061 + L1MEc LINE L1 35 445 -5951 790 269 20 0 chr5 140715421 140715622 -58914528 + MER63A DNA MER1_type 1 205 -5 187 277 0 0 chr5 140715950 140715997 -58914153 - L2 LINE L2 -8 3305 3259 1908 152 0 16 chr5 140716422 140716731 -58913419 + AluSq SINE Alu 1 304 -9 1829 190 83 40 chr5 140717002 140717482 -58912668 - MLT1D LTR MaLR 0 505 5 236 370 31 16 chr5 140717789 140717916 -58912234 - MIR3 SINE MIR -65 143 15 250 242 220 0 chr5 140718310 140718401 -58911749 + L2 LINE L2 3203 3313 0 309 246 108 39 chr5 140718484 140718614 -58911536 + MLT1L LTR MaLR 466 604 -11 312 237 99 15 chr5 140718681 140718812 -58911338 + L1ME2 LINE L1 6013 6154 -10 337 231 8 68 chr5 140719521 140719638 -58910512 + L1MEd LINE L1 65 174 -5945 245 165 39 87 chr5 140719836 140719963 -58910187 - Charlie7 DNA MER1_type -35 2577 2457 735 168 7 44 chr5 140719964 140720101 -58910049 + AluJb SINE Alu 1 132 -180 2240 113 3 0 chr5 140720260 140720569 -58909581 - AluSx SINE Alu -2 310 1 6396 68 0 4 chr5 140724882 140725731 -58904419 + L1PA8 LINE L1 5331 6176 0 26 64 0 0 chr5 140726379 140726426 -58903724 + AT_rich Low_complexity Low_complexity 1 47 0 385 230 173 14 chr5 140726475 140726614 -58903536 - MIR SINE MIR -13 249 89 265 348 56 0 chr5 140727649 140727738 -58902412 + L2 LINE L2 3220 3313 0 2181 161 2 5 chr5 140727813 140728416 -58901734 + AluSx SINE Alu 1 287 -25 471 224 184 0 chr5 140728486 140728611 -58901539 - MER5A DNA MER1_type -2 187 40 2092 162 63 86 chr5 140729135 140729624 -58900526 + MLT2B1 LTR ERVL 3 480 -40 590 189 0 49 chr5 140730803 140730925 -58899225 + FLAM_C SINE Alu 3 118 -25 250 269 106 93 chr5 140730938 140731053 -58899097 - L1M4 LINE L1 -918 5228 5116 1780 124 0 0 chr5 140731053 140731286 -58898864 - AluSq SINE Alu -78 235 3 250 269 106 93 chr5 140731286 140731568 -58898582 - L1M4 LINE L1 -1030 5116 4826 256 264 110 0 chr5 140731640 140731731 -58898419 - L1M4 LINE L1 -2334 3812 3712 417 290 15 15 chr5 140731850 140731981 -58898169 + MLT1L LTR MaLR 105 235 -380 273 254 0 0 chr5 140732315 140732370 -58897780 - LTR16C LTR ERVL 0 491 437 1927 247 99 40 chr5 140732370 140733405 -58896745 + L1ME3A LINE L1 3731 4826 -1320 611 283 11 5 chr5 140733404 140733591 -58896559 + L1M3d LINE L1 11 198 -5693 * 2628 263 30 30 chr5 140733596 140734471 -58895679 + L1ME3A LINE L1 5274 6148 -22 4319 197 57 40 chr5 140734600 140736244 -58893906 - L1MD1 LINE L1 0 6636 4960 1512 271 52 27 chr5 140736247 140736907 -58893243 - L1MD1 LINE L1 -2224 4316 3641 600 150 9 0 chr5 140736907 140737020 -58893130 + MLT2D LTR ERVL 1 114 -300 8086 182 33 22 chr5 140737025 140739372 -58890778 - L1PA16 LINE L1 -4 6162 3771 180 0 0 0 chr5 140739372 140739392 -58890758 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 8086 182 33 22 chr5 140739392 140739691 -58890459 - L1PA16 LINE L1 -2395 3771 3477 1477 139 160 102 chr5 140739695 140740039 -58890111 + MLT2D LTR ERVL 94 457 -7 3434 227 40 10 chr5 140740042 140741628 -58888522 - L1MD1 LINE L1 -2895 3645 2015 603 271 38 58 chr5 140741672 140742019 -58888131 - L1M4 LINE L1 -1424 4722 4383 719 269 95 74 chr5 140742281 140742820 -58887330 - L1M4 LINE L1 -2410 3736 3187 296 333 48 0 chr5 140743349 140743454 -58886696 - MIR3 SINE MIR -21 187 78 43875 42 3 0 chr5 140743812 140749960 -58880190 + L1PA4 LINE L1 1 6155 0 2011 118 3 20 chr5 140749962 140750266 -58879884 + AluSx SINE Alu 1 299 -13 188 137 20 0 chr5 140750687 140750738 -58879412 + A-rich Low_complexity Low_complexity 3 54 0 183 80 0 0 chr5 140751869 140751894 -58878256 + (TG)n Simple_repeat Simple_repeat 1 25 0 234 0 0 0 chr5 140753293 140753319 -58876831 + (A)n Simple_repeat Simple_repeat 1 26 0 235 269 0 0 chr5 140753476 140753528 -58876622 + MER58 DNA MER1_type 26 77 -2343 10944 173 23 2 chr5 140754322 140756921 -58873229 - L1PA13 LINE L1 -2 6161 3502 235 0 0 54 chr5 140756921 140756958 -58873192 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 10944 173 23 2 chr5 140756958 140757201 -58872949 - L1PA13 LINE L1 -2661 3502 3266 219 354 9 62 chr5 140757202 140757315 -58872835 - MER5A DNA MER1_type -36 153 47 * 326 359 8 23 chr5 140757216 140757344 -58872806 + MER5A DNA MER1_type 59 184 -5 247 257 184 59 chr5 140757325 140757461 -58872689 - MIR3 SINE MIR -35 173 21 * 23 54 0 0 chr5 140757638 140757675 -58872475 + AT_rich Low_complexity Low_complexity 1 37 0 435 204 68 92 chr5 140757859 140758149 -58872001 + MLT1H1 LTR MaLR 68 384 -165 329 126 11 35 chr5 140758620 140758707 -58871443 + (GAAA)n Simple_repeat Simple_repeat 3 87 0 258 257 132 21 chr5 140759319 140759463 -58870687 + HAL1b LINE L1 89 248 -1100 2036 101 3 47 chr5 140761433 140761757 -58868393 - AluSq SINE Alu 0 311 1 1969 194 99 13 chr5 140762970 140763435 -58866715 + MLT1D LTR MaLR 1 505 0 309 267 67 25 chr5 140763623 140763743 -58866407 - MIR SINE MIR -41 221 97 300 367 0 17 chr5 140765297 140765417 -58864733 + MIR SINE MIR 5 122 -140 527 233 97 40 chr5 140765977 140766205 -58863945 + MLT1C LTR MaLR 1 241 -226 1757 154 42 48 chr5 140766958 140767335 -58862815 + THE1C LTR MaLR 1 375 0 9698 132 16 35 chr5 140767338 140768940 -58861210 + THE1C-int LTR MaLR 4 1574 -6 804 164 136 37 chr5 140768945 140769159 -58860991 + THE1C LTR MaLR 1 235 -129 834 169 6 36 chr5 140769606 140769772 -58860378 + THE1C LTR MaLR 213 373 -2 203 171 79 0 chr5 140770683 140770759 -58859391 + (TA)n Simple_repeat Simple_repeat 1 82 0 27 29 0 0 chr5 140770872 140770906 -58859244 + AT_rich Low_complexity Low_complexity 1 34 0 307 341 0 11 chr5 140771039 140771127 -58859023 + HAL1b LINE L1 105 191 -1157 236 256 70 93 chr5 140771223 140771438 -58858712 + HAL1b LINE L1 333 542 -806 1993 141 3 0 chr5 140771538 140771821 -58858329 + AluJb SINE Alu 2 285 -27 46 62 0 0 chr5 140771821 140771902 -58858248 + AT_rich Low_complexity Low_complexity 1 81 0 255 173 39 0 chr5 140772514 140772566 -58857584 + L1MC4a LINE L1 5592 5645 -476 252 253 25 13 chr5 140772603 140772682 -58857468 + L1MC4a LINE L1 5834 5913 -1895 23 86 0 0 chr5 140773990 140774048 -58856102 + AT_rich Low_complexity Low_complexity 1 58 0 2383 274 87 24 chr5 140774811 140775456 -58854694 - L1ME LINE L1 -4882 1198 595 194 61 0 30 chr5 140775456 140775489 -58854661 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2053 97 0 7 chr5 140775493 140775772 -58854378 - AluSx SINE Alu -35 277 1 2383 274 87 24 chr5 140775772 140776256 -58853894 - L1ME LINE L1 -5487 593 4 24 32 0 0 chr5 140776479 140776510 -58853640 + AT_rich Low_complexity Low_complexity 1 31 0 1332 261 91 45 chr5 140776930 140777401 -58852749 + MLT1E LTR MaLR 9 501 -92 505 152 432 8 chr5 140777442 140777574 -58852576 - MER5A DNA MER1_type -1 188 1 418 359 100 4 chr5 140777574 140777842 -58852308 - L2 LINE L2 -609 2705 2412 316 338 109 14 chr5 140777860 140778070 -58852080 - L2 LINE L2 -1357 1957 1728 384 332 54 18 chr5 140778368 140778648 -58851502 + L1ME4a LINE L1 5584 5873 -248 360 0 0 0 chr5 140779701 140779741 -58850409 + (CA)n Simple_repeat Simple_repeat 1 40 0 207 0 0 0 chr5 140779742 140779765 -58850385 + (GA)n Simple_repeat Simple_repeat 2 24 0 488 228 0 16 chr5 140780161 140780284 -58849866 + L1M4 LINE L1 2255 2375 -3771 2177 166 71 44 chr5 140780303 140780935 -58849215 + L1MB5 LINE L1 5447 6166 -8 22 35 0 0 chr5 140781634 140781663 -58848487 + AT_rich Low_complexity Low_complexity 1 29 0 309 280 74 62 chr5 140782288 140782545 -58847605 + L2 LINE L2 1569 1828 -1486 231 167 0 0 chr5 140782581 140782623 -58847527 + (TA)n Simple_repeat Simple_repeat 1 42 0 2031 123 133 16 chr5 140783077 140783460 -58846690 + MSTA LTR MaLR 1 428 0 1538 241 75 31 chr5 140784303 140784727 -58845423 - MSTB2 LTR MaLR 0 457 15 205 178 287 30 chr5 140784741 140784842 -58845308 - MIR3 SINE MIR -69 139 13 585 315 68 8 chr5 140785110 140785345 -58844805 - MIR SINE MIR 0 262 14 4962 159 49 20 chr5 140785539 140787002 -58843148 - L1MA8 LINE L1 -5 7705 6202 249 33 0 0 chr5 140787004 140787034 -58843116 + (T)n Simple_repeat Simple_repeat 1 30 0 6217 168 58 5 chr5 140788452 140789705 -58840445 - L1MA8 LINE L1 -1351 6214 4896 * 19432 184 28 8 chr5 140789681 140795077 -58835073 - L1PA13 LINE L1 -1 6813 1272 206 62 31 0 chr5 140795077 140795109 -58835041 + (CAG)n Simple_repeat Simple_repeat 1 33 0 19432 184 28 8 chr5 140795109 140795523 -58834627 - L1PA13 LINE L1 -5542 1272 868 5087 217 47 32 chr5 140795521 140797387 -58832763 - L1MA8 LINE L1 -2750 4047 2211 * 2116 144 0 3 chr5 140797387 140797699 -58832451 - AluSx SINE Alu -1 311 1 5087 217 47 32 chr5 140797699 140797744 -58832406 - L1MA8 LINE L1 -4586 2211 2168 270 0 0 0 chr5 140797744 140797774 -58832376 + (TTG)n Simple_repeat Simple_repeat 2 31 0 5087 217 47 32 chr5 140797774 140798589 -58831561 - L1MA8 LINE L1 -4629 2168 1272 1445 254 73 66 chr5 140798670 140799107 -58831043 - L1MA8 LINE L1 -6442 279 -164 2112 123 0 7 chr5 140799107 140799407 -58830743 + AluSx SINE Alu 1 298 -14 1445 254 73 66 chr5 140799407 140799547 -58830603 - L1MA8 LINE L1 -6885 4294967132 -302 628 110 45 77 chr5 140801282 140801437 -58828713 + L1MA3 LINE L1 5911 6060 -245 1561 129 145 0 chr5 140801437 140801685 -58828465 + AluSx SINE Alu 2 285 -17 228 291 0 0 chr5 140801688 140801767 -58828383 + (TA)n Simple_repeat Simple_repeat 1 79 0 * 588 269 0 0 chr5 140801752 140801927 -58828223 + (CATA)n Simple_repeat Simple_repeat 2 176 0 305 299 23 0 chr5 140801960 140802047 -58828103 + L1MC4 LINE L1 6614 6702 -1340 1230 170 53 0 chr5 140802060 140802307 -58827843 + L1MA3 LINE L1 6046 6305 0 413 317 116 62 chr5 140802857 140803296 -58826854 + L3 LINE CR1 348 810 -767 265 284 184 0 chr5 140803432 140803573 -58826577 - MIR SINE MIR -76 186 20 9268 171 62 96 chr5 140803823 140805222 -58824928 + Cheshire DNA MER1_type 6 1490 -930 1120 185 45 0 chr5 140805222 140805422 -58824728 - AluJb SINE Alu -19 293 85 9268 171 62 96 chr5 140805422 140806320 -58823830 + Cheshire DNA MER1_type 1490 2417 -3 1344 278 65 12 chr5 140806671 140807085 -58823065 + MLT1K LTR MaLR 153 588 0 21 0 0 0 chr5 140807527 140807548 -58822602 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr5 140808910 140808930 -58821220 + (TTG)n Simple_repeat Simple_repeat 2 21 0 829 109 0 62 chr5 140810852 140810980 -58819170 + FLAM_C SINE Alu 1 120 -13 264 223 0 36 chr5 140810998 140811110 -58819040 + (CATA)n Simple_repeat Simple_repeat 3 110 0 535 208 200 0 chr5 140811116 140811241 -58818909 + FRAM SINE Alu 2 151 -25 2199 115 0 0 chr5 140811589 140811885 -58818265 + AluSg SINE Alu 1 296 -14 24 0 0 0 chr5 140812033 140812057 -58818093 + AT_rich Low_complexity Low_complexity 1 24 0 251 237 203 45 chr5 140813243 140813420 -58816730 + L2 LINE L2 3009 3213 -100 869 165 49 37 chr5 140813473 140813637 -58816513 - AluJo SINE Alu -112 200 35 255 283 10 81 chr5 140814645 140814744 -58815406 + L2 LINE L2 2888 2979 -334 201 278 49 118 chr5 140815064 140815208 -58814942 + L2 LINE L2 2673 2806 -508 749 245 0 33 chr5 140815506 140815690 -58814460 + MER5B DNA MER1_type 1 178 0 722 227 0 0 chr5 140816271 140816403 -58813747 + FLAM_A SINE Alu 1 132 -1 1528 185 169 5 chr5 140816609 140816987 -58813163 - L1MB7 LINE L1 0 6184 5745 446 242 237 11 chr5 140817756 140817942 -58812208 - MIR SINE MIR -10 252 25 21 0 0 0 chr5 140819648 140819669 -58810481 + AT_rich Low_complexity Low_complexity 1 21 0 1356 286 123 42 chr5 140820097 140820956 -58809194 + L2 LINE L2 2400 3313 0 800 265 21 42 chr5 140821296 140821534 -58808616 + MIR SINE MIR 30 262 0 317 313 33 20 chr5 140821639 140821789 -58808361 + L2 LINE L2 2326 2477 -837 388 282 29 19 chr5 140821918 140822021 -58808129 - L2 LINE L2 -30 3283 3180 23 33 0 0 chr5 140822330 140822360 -58807790 + AT_rich Low_complexity Low_complexity 1 30 0 2329 106 3 0 chr5 140823714 140824017 -58806133 - AluSx SINE Alu -4 308 5 426 320 147 39 chr5 140825360 140826085 -58804065 + L2 LINE L2 2439 3272 0 221 287 101 23 chr5 140826453 140826582 -58803568 - MIR SINE MIR -13 249 111 214 263 0 0 chr5 140827920 140827977 -58802173 + (CATA)n Simple_repeat Simple_repeat 2 58 0 268 330 18 9 chr5 140829454 140829566 -58800584 - MIR3 SINE MIR -5 203 91 306 246 118 9 chr5 140830151 140830261 -58799889 - MIR SINE MIR -96 166 45 14147 173 25 2 chr5 140831064 140834730 -58795420 + L1PA13 LINE L1 2413 6162 -1 6217 168 58 5 chr5 140834706 140835959 -58794191 + L1 LINE L1 3477 4795 -1351 * 203 292 0 0 chr5 140837462 140837510 -58792640 - L2 LINE L2 -86 3227 3180 249 335 116 19 chr5 140838267 140838482 -58791668 + L2 LINE L2 2813 3048 -224 2201 84 3 11 chr5 140838771 140839058 -58791092 - AluSp SINE Alu -28 285 1 2357 97 0 0 chr5 140839216 140839515 -58790635 - AluSg1 SINE Alu -10 299 1 338 337 77 12 chr5 140839722 140839891 -58790259 - L3b LINE CR1 -118 1465 1286 235 361 33 0 chr5 140842727 140842849 -58787301 - L2 LINE L2 0 3272 3147 798 183 73 6 chr5 140843648 140843812 -58786338 - AluJb SINE Alu -137 175 1 2161 104 7 0 chr5 140844191 140844479 -58785671 + AluSg SINE Alu 1 290 -20 216 132 66 26 chr5 140844606 140844682 -58785468 + (TA)n Simple_repeat Simple_repeat 1 79 0 1680 146 38 11 chr5 140844821 140845112 -58785038 - AluSx SINE Alu 0 308 11 548 231 179 0 chr5 140845139 140845312 -58784838 - L1ME LINE L1 -307 5814 5611 1545 159 33 22 chr5 140845345 140845616 -58784534 + AluJo SINE Alu 21 294 -18 1722 101 40 29 chr5 140845618 140845895 -58784255 + AluY SINE Alu 1 280 -31 288 0 0 0 chr5 140845898 140845930 -58784220 + (TA)n Simple_repeat Simple_repeat 2 33 0 330 288 98 28 chr5 140845930 140846145 -58784005 + L1ME4a LINE L1 5650 5879 -242 352 237 93 0 chr5 140846181 140846320 -58783830 + L1ME4a LINE L1 5949 6100 -21 2317 91 0 13 chr5 140846370 140846677 -58783473 + AluSg SINE Alu 1 303 -7 221 159 34 159 chr5 140897397 140897485 -58732665 - MER5A DNA MER1_type 0 189 113 * 229 245 0 19 chr5 140897451 140897504 -58732646 + MER5A DNA MER1_type 55 106 -83 22 56 0 0 chr5 140898766 140898802 -58731348 + AT_rich Low_complexity Low_complexity 1 36 0 2599 118 24 56 chr5 140899437 140899887 -58730263 - MER83 LTR ERV1 -11 437 2 667 319 94 42 chr5 140899975 140900811 -58729339 + L1ME2 LINE L1 40 919 -5477 301 258 30 0 chr5 140900854 140900920 -58729230 + L1ME2 LINE L1 1115 1182 -5035 342 0 0 0 chr5 140900920 140900958 -58729192 + (CA)n Simple_repeat Simple_repeat 2 39 0 1273 244 96 119 chr5 140900961 140901540 -58728610 + L1ME2 LINE L1 1401 1992 -4223 908 106 50 0 chr5 140901540 140901700 -58728450 + L1MA8 LINE L1 6112 6279 -12 1273 244 96 119 chr5 140901700 140902084 -58728066 + L1ME2 LINE L1 1992 2383 -3832 1803 152 0 10 chr5 140902084 140902373 -58727777 + AluSx SINE Alu 9 294 -18 1273 244 96 119 chr5 140902373 140902880 -58727270 + L1ME2 LINE L1 2383 2900 -3315 1832 148 21 7 chr5 140902880 140903171 -58726979 + AluSx SINE Alu 2 296 -16 1273 244 96 119 chr5 140903171 140904337 -58725813 + L1ME2 LINE L1 2900 3952 -2263 1410 180 45 4 chr5 140904352 140904619 -58725531 - AluJb SINE Alu -12 300 23 597 177 80 0 chr5 140904676 140904789 -58725361 + FLAM_C SINE Alu 3 124 -19 3729 200 38 24 chr5 140904799 140905074 -58725076 + L1ME2 LINE L1 5049 5319 -1084 1666 66 0 0 chr5 140905074 140905287 -58724863 - L1PA7 LINE L1 -10 6144 5932 3729 200 38 24 chr5 140905287 140906132 -58724018 + L1ME2 LINE L1 5319 6401 -2 4875 144 29 2 chr5 140906232 140907063 -58723087 - L1PB4 LINE L1 -8 6148 5296 1520 108 33 0 chr5 140907111 140907352 -58722798 - L1MA5A LINE L1 -6 6291 6043 25 0 0 0 chr5 140907357 140907382 -58722768 + AT_rich Low_complexity Low_complexity 1 25 0 24 91 0 0 chr5 140908222 140908288 -58721862 + AT_rich Low_complexity Low_complexity 1 66 0 2116 223 86 15 chr5 140908376 140908922 -58721228 + Cheshire DNA MER1_type 1 585 -1835 1516 218 64 48 chr5 140908922 140909358 -58720792 - MLT1E LTR MaLR 0 593 151 322 322 25 17 chr5 140909486 140909604 -58720546 + MIR3 SINE MIR 53 171 -37 212 237 40 66 chr5 140909673 140909749 -58720401 + L2 LINE L2 3199 3272 0 285 260 12 83 chr5 140909885 140910054 -58720096 + HAL1 LINE L1 811 967 -1540 330 346 15 0 chr5 140910183 140910316 -58719834 + HAL1 LINE L1 1155 1289 -1218 236 245 28 28 chr5 140910605 140910711 -58719439 + HAL1 LINE L1 2252 2357 -150 352 312 32 60 chr5 140910749 140910967 -58719183 + HAL1 LINE L1 2225 2436 -71 468 284 52 28 chr5 140913155 140913366 -58716784 - MER112 DNA MER1_type -6 254 39 516 99 0 0 chr5 140913706 140913777 -58716373 - AluJo SINE Alu -16 296 226 1045 188 18 0 chr5 140913778 140913948 -58716202 - AluJo SINE Alu -138 174 2 411 191 0 71 chr5 140914220 140914304 -58715846 - L2 LINE L2 -5 3267 3190 2459 212 111 12 chr5 140914445 140915015 -58715135 + MER82 DNA MER2_type 22 647 -6 718 216 166 17 chr5 140915021 140915262 -58714888 + L1MC5 LINE L1 7094 7370 -591 187 340 113 28 chr5 140915304 140915410 -58714740 + L2 LINE L2 3158 3272 0 1226 238 108 10 chr5 140916770 140916923 -58713227 + L1ME1 LINE L1 5518 5655 -511 375 23 0 0 chr5 140916923 140916967 -58713183 + (CA)n Simple_repeat Simple_repeat 1 44 0 1226 238 108 10 chr5 140916967 140917284 -58712866 + L1ME1 LINE L1 5655 6064 -102 24 0 0 0 chr5 140917404 140917428 -58712722 + AT_rich Low_complexity Low_complexity 1 24 0 1465 179 13 68 chr5 140917463 140917770 -58712380 + AluJo SINE Alu 11 300 -12 2483 59 0 16 chr5 140917792 140918096 -58712054 - AluY SINE Alu -12 299 1 1945 108 65 4 chr5 140918214 140918493 -58711657 + AluSx SINE Alu 2 297 -15 195 262 146 39 chr5 140918597 140918700 -58711450 - L2 LINE L2 -4 3309 3196 653 273 91 70 chr5 140919760 140920090 -58710060 - MER46C DNA MER2_type 0 338 2 219 250 21 0 chr5 140920669 140920717 -58709433 + MIR3 SINE MIR 149 197 -11 1662 164 31 40 chr5 140921003 140921282 -58708868 - MER2 DNA MER2_type 0 345 68 2015 115 34 7 chr5 140921282 140921577 -58708573 - AluSg SINE Alu -7 303 1 1662 164 31 40 chr5 140921577 140921620 -58708530 - MER2 DNA MER2_type -277 68 26 342 307 16 85 chr5 140921803 140921992 -58708158 + MER5B DNA MER1_type 2 177 -1 244 258 52 30 chr5 140923337 140923478 -58706672 - HAL1b LINE L1 -2 6119 1213 244 151 0 38 chr5 140923514 140923567 -58706583 + L1MC4 LINE L1 6658 6708 -1334 2072 118 3 0 chr5 140924455 140924742 -58705408 + AluSq SINE Alu 1 288 -25 1382 140 0 0 chr5 140924749 140924949 -58705201 + AluSx SINE Alu 2 201 -111 431 291 28 14 chr5 140925087 140925228 -58704922 + MLT1L LTR MaLR 128 270 -345 187 247 0 82 chr5 140926746 140926819 -58703331 - MIR SINE MIR -10 252 186 200 288 85 68 chr5 140927787 140927905 -58702245 + MIR SINE MIR 29 148 -114 345 246 165 99 chr5 140930879 140931311 -58698839 + L1M2 LINE L1 525 1148 -5701 207 0 0 0 chr5 140931369 140931392 -58698758 + (CGAG)n Simple_repeat Simple_repeat 2 24 0 719 109 0 0 chr5 140933266 140933367 -58696783 + HY3 scRNA scRNA 1 101 0 562 227 47 8 chr5 140933478 140933606 -58696544 + FLAM_A SINE Alu 1 133 0 1918 115 0 0 chr5 140933678 140933939 -58696211 + AluSx SINE Alu 38 298 -14 1282 198 64 62 chr5 140935073 140935446 -58694704 - MLT1A2 LTR MaLR 0 374 1 550 293 49 0 chr5 140936744 140936908 -58693242 + MIR SINE MIR 89 260 -2 298 105 0 0 chr5 140937310 140937375 -58692775 - Alu SINE Alu 0 309 245 289 263 35 18 chr5 140937536 140937650 -58692500 + LTR67 LTR ERVL 434 549 -8 351 287 101 8 chr5 140938966 140939095 -58691055 + L1MC4a LINE L1 6545 6685 -1123 2446 195 43 8 chr5 140939156 140939644 -58690506 - MLT1D LTR MaLR 0 505 1 470 303 35 7 chr5 140939876 140940021 -58690129 - MIR SINE MIR -98 164 16 201 250 21 0 chr5 140940132 140940180 -58689970 + GA-rich Low_complexity Low_complexity 3 51 0 1829 155 0 16 chr5 140940939 140941242 -58688908 - AluSp SINE Alu -15 298 1 364 269 32 58 chr5 140942239 140942395 -58687755 - MIR SINE MIR -10 252 101 * 422 269 174 35 chr5 140942370 140942571 -58687579 - L2 LINE L2 -558 2756 2528 458 175 39 7 chr5 140943467 140943621 -58686529 + (TA)n Simple_repeat Simple_repeat 2 160 0 297 0 0 0 chr5 140943693 140943726 -58686424 + (CA)n Simple_repeat Simple_repeat 2 34 0 478 274 55 37 chr5 140944291 140944455 -58685695 + LTR33A LTR ERVL 350 516 -7 2648 114 46 10 chr5 140944742 140945155 -58684995 - MSTA LTR MaLR 0 428 1 461 321 71 6 chr5 140945256 140945424 -58684726 + MIR SINE MIR 34 212 -50 481 184 229 0 chr5 140945635 140945744 -58684406 + MER63 DNA MER1_type 1 760 -76 2095 127 3 0 chr5 140945899 140946199 -58683951 + AluSx SINE Alu 1 301 -11 1644 175 13 23 chr5 140946935 140947238 -58682912 + AluJo SINE Alu 1 300 -12 1827 180 3 3 chr5 140947681 140947987 -58682163 + AluJb SINE Alu 1 306 -6 24 32 0 0 chr5 140948083 140948114 -58682036 + AT_rich Low_complexity Low_complexity 1 31 0 2147 140 0 10 chr5 140948363 140948677 -58681473 - AluSx SINE Alu -1 311 1 2189 92 10 0 chr5 140948879 140949172 -58680978 - AluY SINE Alu -15 296 1 1043 193 38 30 chr5 140949175 140949439 -58680711 - L1MD2 LINE L1 -9 6350 6085 4761 225 63 65 chr5 140949451 140950779 -58679371 - L1M4 LINE L1 -829 5317 3988 2225 112 0 0 chr5 140950779 140951109 -58679041 - AluSc SINE Alu 0 309 3 4761 225 63 65 chr5 140951109 140951303 -58678847 - L1M4 LINE L1 -2158 3988 3795 405 0 0 0 chr5 140951303 140951348 -58678802 + (TA)n Simple_repeat Simple_repeat 1 45 0 4761 225 63 65 chr5 140951348 140951363 -58678787 - L1M4 LINE L1 -2351 3795 3781 763 189 0 15 chr5 140951363 140951495 -58678655 - FLAM_A SINE Alu 0 133 4 4761 225 63 65 chr5 140951495 140951713 -58678437 - L1M4 LINE L1 -2365 3781 3563 2028 290 42 9 chr5 140951753 140952295 -58677855 - L1MDb LINE L1 -5841 568 9 2403 97 0 0 chr5 140952990 140953298 -58676852 - AluSq SINE Alu -3 310 3 571 299 71 27 chr5 140954419 140954713 -58675437 - MLT1K LTR MaLR -1 587 281 336 311 60 7 chr5 140957258 140957409 -58672741 - L2 LINE L2 -5 3308 3150 428 270 45 19 chr5 140957869 140958009 -58672141 - MIR SINE MIR -81 127 31 23 54 0 0 chr5 140958167 140958204 -58671946 + AT_rich Low_complexity Low_complexity 1 37 0 240 237 65 11 chr5 140959091 140959184 -58670966 + LTR67 LTR ERVL 432 529 -28 1862 117 20 47 chr5 140960953 140961253 -58668897 + AluSx SINE Alu 1 292 -20 187 272 86 25 chr5 140961779 140961860 -58668290 - MIR3 SINE MIR -11 197 112 2210 118 0 13 chr5 140962989 140963306 -58666844 + AluSx SINE Alu 1 313 0 266 335 76 6 chr5 140963356 140963514 -58666636 + ERVL LTR ERVL 764 932 -4832 962 333 61 25 chr5 140963575 140964020 -58666130 + ERVL LTR ERVL 1765 2225 -3539 390 290 83 68 chr5 140964124 140964462 -58665688 + ERVL LTR ERVL 2199 2541 -2944 23 0 0 0 chr5 141015349 141015372 -58614778 + AT_rich Low_complexity Low_complexity 1 23 0 1952 129 0 21 chr5 141015372 141015659 -58614491 - AluJb SINE Alu -21 291 11 10165 161 62 77 chr5 141016616 141018637 -58611513 - L1MC1 LINE L1 0 6613 4562 216 0 0 0 chr5 141018637 141018661 -58611489 + (TG)n Simple_repeat Simple_repeat 1 24 0 2134 124 6 16 chr5 141018663 141018978 -58611172 - AluSx SINE Alu 0 312 1 10165 161 62 77 chr5 141018978 141019606 -58610544 - L1MC1 LINE L1 -2052 4561 3925 921 114 0 0 chr5 141019606 141019729 -58610421 - FLAM_C SINE Alu -20 123 1 10165 161 62 77 chr5 141019729 141023646 -58606504 - L1MC1 LINE L1 -2688 3925 33 279 329 0 0 chr5 141023671 141023753 -58606397 + MIR3 SINE MIR 118 199 -9 243 294 159 8 chr5 141024498 141024624 -58605526 - L1MC4 LINE L1 -142 7900 7756 2012 243 259 16 chr5 141024654 141025520 -58604630 - L1MC4a LINE L1 -135 7673 6598 208 203 25 63 chr5 141025521 141025562 -58604588 + (CATATA)n Simple_repeat Simple_repeat 6 44 -37 1344 160 124 47 chr5 141025562 141025900 -58604250 - MLT1A1 LTR MaLR -1 364 1 208 203 25 63 chr5 141025900 141025937 -58604213 + (CATATA)n Simple_repeat Simple_repeat 44 81 0 1929 112 42 7 chr5 141025945 141026232 -58603918 + AluSx SINE Alu 2 298 -14 498 247 62 41 chr5 141028008 141028202 -58601948 - L1MC4 LINE L1 -1340 6702 6505 393 320 128 18 chr5 141028259 141028478 -58601672 - MIR SINE MIR -14 248 6 394 350 39 11 chr5 141028494 141028674 -58601476 - L1MC4 LINE L1 -2144 5664 5480 336 291 151 48 chr5 141028721 141029013 -58601137 + L2 LINE L2 2651 2972 -342 1808 221 43 16 chr5 141029909 141030349 -58599801 - LTR40c LTR ERVL -13 452 1 1774 171 4 0 chr5 141030571 141030852 -58599298 - AluJo SINE Alu -30 282 1 2128 143 0 0 chr5 141031304 141031612 -58598538 - AluSq SINE Alu -5 308 1 271 267 192 70 chr5 141031658 141031830 -58598320 - MIR SINE MIR -1 261 69 287 297 133 12 chr5 141031902 141032067 -58598083 + MIR SINE MIR 29 213 -49 2041 185 29 68 chr5 141032255 141032525 -58597625 + L1MB5 LINE L1 5558 5837 -337 689 162 0 44 chr5 141032525 141032661 -58597489 + FLAM_A SINE Alu 4 133 0 2041 185 29 68 chr5 141032661 141032674 -58597476 + L1MB5 LINE L1 5837 5849 -325 2360 81 0 3 chr5 141032674 141032972 -58597178 + AluY SINE Alu 3 299 -12 2041 185 29 68 chr5 141032972 141033200 -58596950 + L1MB5 LINE L1 5849 6047 -127 392 309 243 11 chr5 141033667 141033848 -58596302 - MIR SINE MIR -29 233 11 2310 144 3 9 chr5 141034062 141034402 -58595748 + MER1B DNA MER1_type 2 339 0 1787 189 3 0 chr5 141035848 141036133 -58594017 + AluJo SINE Alu 5 290 -22 2367 84 3 0 chr5 141038854 141039152 -58590998 + AluSp SINE Alu 1 299 -14 300 298 165 6 chr5 141039471 141039645 -58590505 + MIR3 SINE MIR 2 202 -6 21 36 0 0 chr5 141040773 141040801 -58589349 + AT_rich Low_complexity Low_complexity 1 28 0 182 350 70 20 chr5 141041725 141041825 -58588325 - L2 LINE L2 -8 3264 3160 198 0 0 0 chr5 141041955 141041977 -58588173 + (T)n Simple_repeat Simple_repeat 1 22 0 1737 168 46 3 chr5 141042749 141043034 -58587116 + AluJb SINE Alu 1 297 -15 1675 184 57 13 chr5 141043050 141043366 -58586784 - MER7A DNA MER2_type -14 332 5 23 68 0 0 chr5 141044275 141044319 -58585831 + AT_rich Low_complexity Low_complexity 1 44 0 311 263 63 34 chr5 141045029 141045204 -58584946 + L1ME4a LINE L1 5724 5903 -218 180 0 0 0 chr5 141046308 141046328 -58583822 + (T)n Simple_repeat Simple_repeat 1 20 0 666 130 113 9 chr5 141046771 141046886 -58583264 + FLAM_C SINE Alu 1 127 -6 848 291 97 9 chr5 141047218 141047548 -58582602 - L1MEc LINE L1 -5958 438 80 23 0 0 0 chr5 141047874 141047897 -58582253 + AT_rich Low_complexity Low_complexity 1 23 0 318 259 59 0 chr5 141048619 141048704 -58581446 - L3 LINE CR1 -248 1329 1240 990 156 42 10 chr5 141049008 141049200 -58580950 + MER105 DNA DNA 3 200 -4 23 54 0 0 chr5 141049212 141049249 -58580901 + AT_rich Low_complexity Low_complexity 1 37 0 241 277 36 0 chr5 141049425 141049508 -58580642 + L2 LINE L2 1221 1306 -2008 562 280 70 73 chr5 141049553 141049896 -58580254 + L2 LINE L2 1972 2313 -1001 243 265 61 51 chr5 141049944 141050042 -58580108 + L3 LINE CR1 1144 1242 -335 22 35 0 0 chr5 141050195 141050224 -58579926 + AT_rich Low_complexity Low_complexity 1 29 0 924 177 50 15 chr5 141050347 141050545 -58579605 - LTR43 LTR ERV1 -82 520 316 590 332 129 16 chr5 141051626 141052066 -58578084 + L2 LINE L2 1939 2428 -886 470 346 111 30 chr5 141052078 141052650 -58577500 + L2 LINE L2 2682 3304 -9 1876 178 0 0 chr5 141053031 141053329 -58576821 + AluJb SINE Alu 1 298 -14 240 357 29 64 chr5 141054313 141054410 -58575740 + MIR3 SINE MIR 35 127 -81 237 33 0 0 chr5 141054410 141054440 -58575710 + (TTG)n Simple_repeat Simple_repeat 2 31 0 240 357 29 64 chr5 141054440 141054482 -58575668 + MIR3 SINE MIR 127 169 -39 274 299 141 22 chr5 141056867 141057051 -58573099 + LTR33A LTR ERVL 107 312 -211 411 188 79 59 chr5 141057066 141057093 -58573057 - MER46A DNA MER2_type -133 103 78 2357 100 19 35 chr5 141057093 141057463 -58572687 + THE1B LTR MaLR 1 364 0 411 188 79 59 chr5 141057463 141057536 -58572614 - MER46A DNA MER2_type -158 78 1 715 184 24 8 chr5 141057750 141057875 -58572275 + AluJb SINE Alu 3 129 -183 308 241 46 11 chr5 141057876 141057963 -58572187 + L1MC4 LINE L1 6614 6703 -1339 194 191 21 0 chr5 141057963 141058010 -58572140 + (CATATA)n Simple_repeat Simple_repeat 2 49 0 1023 180 0 6 chr5 141058010 141058182 -58571968 + AluJb SINE Alu 135 305 -7 712 296 150 29 chr5 141058716 141059207 -58570943 - L2 LINE L2 -9 3304 2759 521 259 212 0 chr5 141059209 141059402 -58570748 + MIR SINE MIR 1 234 -28 248 316 44 35 chr5 141059436 141059550 -58570600 - L2 LINE L2 -548 2766 2652 * 278 284 0 0 chr5 141059548 141059615 -58570535 + L2 LINE L2 2255 2321 -993 237 158 0 0 chr5 141059620 141059658 -58570492 - Charlie1b DNA MER1_type 0 523 486 1305 203 57 13 chr5 141059691 141059991 -58570159 - Charlie1b DNA MER1_type -185 338 26 180 354 31 0 chr5 141059991 141060056 -58570094 + L2 LINE L2 2349 2415 -899 621 152 9 0 chr5 141060950 141061055 -58569095 - MER46A DNA MER2_type 0 236 131 * 744 193 78 0 chr5 141061052 141061218 -58568932 - MER46A DNA MER2_type -45 191 13 219 114 0 0 chr5 141061218 141061253 -58568897 + (TA)n Simple_repeat Simple_repeat 2 36 0 182 222 0 93 chr5 141065244 141065298 -58564852 - L2 LINE L2 -86 3227 3179 297 277 89 9 chr5 141066001 141066113 -58564037 - MIR SINE MIR -6 256 136 294 52 379 0 chr5 141066113 141066171 -58563979 - MADE1 DNA Mariner 0 80 1 280 297 60 3 chr5 141066171 141066277 -58563873 - MIR SINE MIR -76 132 20 609 258 191 0 chr5 141066652 141066861 -58563289 + MIR SINE MIR 2 250 -12 323 216 40 14 chr5 141067195 141067269 -58562881 - L2 LINE L2 -1 3312 3237 256 243 29 58 chr5 141070318 141070421 -58559729 - L1ME3A LINE L1 -106 6064 5965 563 292 18 33 chr5 141070622 141070896 -58559254 - L1ME3A LINE L1 -524 5646 5377 912 182 112 0 chr5 141070898 141071068 -58559082 - AluJb SINE Alu -26 286 98 810 326 65 15 chr5 141071269 141071793 -58558357 + L1MEc LINE L1 1268 1817 -4579 244 260 141 16 chr5 141072050 141072242 -58557908 + L1MEc LINE L1 2156 2371 -4025 515 0 0 0 chr5 141072245 141072301 -58557849 - L1PA4 LINE L1 -1579 4567 4512 7424 35 4 10 chr5 141072301 141073878 -58556272 + L1PA4 LINE L1 4582 6155 0 4060 259 156 20 chr5 141073886 141076246 -58553904 + L1MEc LINE L1 2336 5015 -1200 2042 257 113 24 chr5 141076249 141076772 -58553378 + L1MEc LINE L1 5101 5576 -663 1561 130 190 0 chr5 141076772 141077072 -58553078 + MER46B DNA MER2_type 1 232 -4 2042 257 113 24 chr5 141077072 141077603 -58552547 + L1MEc LINE L1 5576 6239 0 277 269 167 0 chr5 141077698 141077806 -58552344 + L1MC/D LINE L1 5677 5802 -2006 695 165 35 71 chr5 141078274 141078444 -58551706 + FAM SINE Alu 10 173 -12 21 0 0 0 chr5 141078797 141078818 -58551332 + AT_rich Low_complexity Low_complexity 1 21 0 927 166 12 30 chr5 141078851 141079020 -58551130 + FRAM SINE Alu 1 166 0 647 298 76 42 chr5 141079237 141079475 -58550675 - MIR SINE MIR -15 247 2 1215 172 188 16 chr5 141079654 141079957 -58550193 - MLT1A2 LTR MaLR -1 373 19 306 304 62 18 chr5 141079976 141080088 -58550062 + L3 LINE CR1 448 564 -1013 186 231 0 0 chr5 141080160 141080199 -58549951 - L2 LINE L2 -2 3311 3273 232 290 0 16 chr5 141080277 141080339 -58549811 - L2 LINE L2 -9 3304 3244 700 306 168 16 chr5 141080387 141080769 -58549381 + L3 LINE CR1 756 1195 -382 1406 136 4 35 chr5 141080774 141081002 -58549148 + AluJb SINE Alu 74 294 -18 321 204 239 0 chr5 141081229 141081317 -58548833 + L2 LINE L2 3201 3309 -4 420 247 191 7 chr5 141081335 141081618 -58548532 + L1ME4a LINE L1 5715 6049 -72 21 0 0 0 chr5 141083357 141083378 -58546772 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 141084575 141084597 -58545553 + AT_rich Low_complexity Low_complexity 1 22 0 1268 134 73 4 chr5 141084597 141084829 -58545321 - L1MB7 LINE L1 -24 6160 5913 280 301 97 9 chr5 141085192 141085305 -58544845 + L2 LINE L2 3149 3271 -1 21 0 0 0 chr5 141085479 141085500 -58544650 + AT_rich Low_complexity Low_complexity 1 21 0 1247 120 30 43 chr5 141085509 141085743 -58544407 + L1MB4 LINE L1 5944 6174 -6 185 219 14 0 chr5 141087914 141087987 -58542163 + GA-rich Low_complexity Low_complexity 2 75 0 2120 187 3 0 chr5 141089046 141089410 -58540740 + MLT1A1 LTR MaLR 1 365 0 219 36 0 0 chr5 141089484 141089512 -58540638 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3901 213 129 43 chr5 141089521 141090917 -58539233 + L1ME2 LINE L1 3972 5482 -684 1688 194 65 56 chr5 141090933 141091493 -58538657 + L1ME2 LINE L1 5634 6184 0 528 16 0 0 chr5 141091540 141091601 -58538549 + (TATG)n Simple_repeat Simple_repeat 2 62 0 1121 93 40 0 chr5 141091601 141091747 -58538403 - AluY SINE Alu -24 287 136 2150 113 0 3 chr5 141092385 141092691 -58537459 - AluSx SINE Alu 0 306 2 30744 113 13 59 chr5 141092853 141099304 -58530846 + L1PA7 LINE L1 13 6154 0 13752 194 16 14 chr5 141099299 141104010 -58526140 + L1PB2 LINE L1 1437 6148 -3 * 303 145 92 0 chr5 141104025 141104101 -58526049 + L1MB3 LINE L1 2142 2224 -4160 * 8119 218 54 67 chr5 141104086 141106224 -58523926 + L1MB3 LINE L1 2821 4912 -1470 960 191 120 96 chr5 141106224 141106642 -58523508 - MSTC LTR MaLR 0 428 1 8119 218 54 67 chr5 141106642 141107336 -58522814 + L1MB3 LINE L1 4912 5614 -768 2267 228 84 6 chr5 141107345 141107870 -58522280 + MER21B LTR ERV1 175 779 -84 15557 145 16 52 chr5 141107884 141111770 -58518380 + L1PA8 LINE L1 6 3845 -2616 11200 88 10 3 chr5 141111771 141114131 -58516019 + L1PA8 LINE L1 4113 6476 -11 1134 150 0 0 chr5 141114309 141114489 -58515661 + L1MB3 LINE L1 5882 6061 -346 5883 234 28 19 chr5 141114497 141116682 -58513468 + L1PA12 LINE L1 7 2886 -4698 2185 145 0 0 chr5 141116682 141116992 -58513158 + AluSx SINE Alu 1 310 -2 5883 234 28 19 chr5 141116992 141117517 -58512633 + L1PA12 LINE L1 2886 3405 -4179 295 164 0 0 chr5 141117518 141117573 -58512577 + L1PA13 LINE L1 6093 6147 -16 1849 141 66 3 chr5 141117589 141117936 -58512214 + L1MB3 LINE L1 6050 6418 -1 957 220 18 9 chr5 141117938 141118161 -58511989 + L1MD2 LINE L1 6121 6345 -14 239 191 0 0 chr5 141118239 141118281 -58511869 + MIR SINE MIR 110 151 -111 471 216 135 40 chr5 141118297 141118519 -58511631 + L1MC4 LINE L1 7800 8042 0 30 83 0 0 chr5 141118557 141118629 -58511521 + AT_rich Low_complexity Low_complexity 1 72 0 2104 142 0 3 chr5 141118747 141119058 -58511092 + AluSx SINE Alu 1 310 -2 367 245 65 69 chr5 141119612 141119828 -58510322 + L1M4 LINE L1 3730 3944 -2202 2553 133 80 8 chr5 141119830 141120290 -58509860 - LTR12 LTR ERV1 -237 477 1 1197 201 91 59 chr5 141120318 141120726 -58509424 + MLT1D LTR MaLR 1 421 -84 1904 64 64 123 chr5 141120731 141121057 -58509093 - AluY SINE Alu -4 307 1 1968 108 75 0 chr5 141121057 141121335 -58508815 - AluSx SINE Alu -13 299 1 442 175 10 10 chr5 141121344 141121441 -58508709 + MER20B DNA MER1_type 687 783 0 672 183 158 6 chr5 141121591 141121755 -58508395 + MER5A DNA MER1_type 1 189 0 2409 156 14 19 chr5 141121908 141122324 -58507826 - MLT2D LTR ERVL 0 414 1 483 286 39 39 chr5 141122425 141122497 -58507653 + MER5A DNA MER1_type 12 83 -106 2012 123 17 17 chr5 141122497 141122846 -58507304 + L1MB3 LINE L1 5831 6179 -4 483 286 39 39 chr5 141122846 141122951 -58507199 + MER5A DNA MER1_type 82 189 0 1665 162 81 32 chr5 141123881 141123943 -58506207 + MLT1A1 LTR MaLR 1 58 -307 4730 146 57 26 chr5 141123943 141124834 -58505316 + MER49 LTR ERV1 5 923 0 1665 162 81 32 chr5 141124834 141125116 -58505034 + MLT1A1 LTR MaLR 58 362 -3 548 57 0 0 chr5 141125400 141125470 -58504680 + AluJ/FRAM SINE Alu 233 302 -10 472 243 14 40 chr5 141125542 141125690 -58504460 + L1ME LINE L1 5430 5573 -591 * 5049 171 46 27 chr5 141125666 141126844 -58503306 - L1 LINE L1 -2500 5065 3866 3335 98 4 0 chr5 141126849 141127319 -58502831 - L1PA13 LINE L1 -156 6007 5536 2972 253 57 50 chr5 141127319 141128146 -58502004 - L1 LINE L1 -4025 3540 2720 581 269 0 0 chr5 141128146 141128265 -58501885 - FLAM_A SINE Alu -14 119 1 2972 253 57 50 chr5 141128265 141128943 -58501207 - L1 LINE L1 -4845 2720 2048 238 250 6 75 chr5 141129718 141129876 -58500274 + MIR SINE MIR 19 194 -68 503 281 6 44 chr5 141130062 141130222 -58499928 + MIR SINE MIR 109 262 0 2088 168 35 25 chr5 141130340 141130738 -58499412 + MER93a LTR ERV1 1 402 0 21 0 0 0 chr5 141130827 141130848 -58499302 + AT_rich Low_complexity Low_complexity 1 21 0 311 246 200 8 chr5 141131219 141131349 -58498801 + L1ME4a LINE L1 5123 5277 -869 27 73 0 0 chr5 141131488 141131543 -58498607 + AT_rich Low_complexity Low_complexity 1 55 0 239 178 89 22 chr5 141131956 141132046 -58498104 + L1ME4a LINE L1 5742 5837 -284 334 246 73 59 chr5 141132089 141132321 -58497829 + L2 LINE L2 3002 3313 0 406 216 43 68 chr5 141132336 141132498 -58497652 + L1ME4a LINE L1 5961 6118 -3 205 189 0 0 chr5 141132499 141132536 -58497614 + (TATG)n Simple_repeat Simple_repeat 3 39 0 364 248 68 60 chr5 141132863 141132980 -58497170 - L2 LINE L2 -13 3259 3142 286 339 9 26 chr5 141133869 141133984 -58496166 + MIR3 SINE MIR 9 121 -87 1853 126 8 0 chr5 141134166 141134451 -58495699 + AluSx SINE Alu 26 312 0 798 299 14 0 chr5 141134653 141134867 -58495283 + MIR SINE MIR 29 245 -17 193 267 0 0 chr5 141134957 141135002 -58495148 + MIR SINE MIR 213 257 -5 24 0 0 0 chr5 141135236 141135260 -58494890 + AT_rich Low_complexity Low_complexity 1 24 0 2875 108 87 84 chr5 141135748 141135889 -58494261 + L1MA9 LINE L1 5655 5794 -518 2346 87 0 3 chr5 141135889 141136200 -58493950 + AluY SINE Alu 2 311 0 2875 108 87 84 chr5 141136200 141136714 -58493436 + L1MA9 LINE L1 5794 6312 0 414 167 0 0 chr5 141136759 141136819 -58493331 + AluJ/FRAM SINE Alu 224 283 -29 438 273 65 7 chr5 141136971 141137110 -58493040 + MLT1L LTR MaLR 234 380 -235 623 251 6 55 chr5 141137411 141137594 -58492556 + MIR3 SINE MIR 34 207 -1 628 240 64 15 chr5 141137606 141137990 -58492160 - LTR16A LTR ERVL -5 445 16 315 254 28 55 chr5 141138067 141138248 -58491902 - L1MC5 LINE L1 -32 7929 7754 2555 66 0 0 chr5 141139575 141139879 -58490271 + AluY SINE Alu 1 304 -7 451 294 143 14 chr5 141139913 141140355 -58489795 + L1ME3A LINE L1 3750 4248 -1898 1348 270 122 25 chr5 141140358 141140865 -58489285 + L1ME3A LINE L1 4281 4737 -1409 1067 222 92 24 chr5 141140865 141141203 -58488947 - MLT1A1 LTR MaLR -4 361 1 1348 270 122 25 chr5 141141203 141141579 -58488571 + L1ME3A LINE L1 4737 5250 -896 614 286 146 30 chr5 141141582 141142145 -58488005 + L1ME3A LINE L1 5320 5947 -223 369 142 0 75 chr5 141142868 141143002 -58487148 + (AGGGGG)n Simple_repeat Simple_repeat 2 125 0 290 134 24 61 chr5 141143642 141143657 -58486493 - L1MA10 LINE L1 -2 6332 6318 850 180 86 49 chr5 141143657 141143901 -58486249 - L1ME1 LINE L1 -5 6161 5909 230 49 0 49 chr5 141144277 141144318 -58485832 + (TAAAAA)n Simple_repeat Simple_repeat 2 40 0 686 262 103 26 chr5 141145451 141145684 -58484466 + MIR SINE MIR 4 254 -8 355 297 36 9 chr5 141147289 141147400 -58482750 - L2 LINE L2 -3 3269 3156 21 0 0 0 chr5 141147400 141147421 -58482729 + AT_rich Low_complexity Low_complexity 1 21 0 3418 67 0 5 chr5 141147479 141147926 -58482224 + L1PA7 LINE L1 5710 6154 0 270 0 0 0 chr5 141148362 141148392 -58481758 + (A)n Simple_repeat Simple_repeat 1 30 0 539 338 98 4 chr5 141148660 141148894 -58481256 + MIR SINE MIR 2 257 -5 840 264 84 33 chr5 141148906 141149205 -58480945 - L2 LINE L2 -32 3281 2968 2865 12 0 6 chr5 141150675 141150995 -58479155 + AluYb8 SINE Alu 1 318 0 299 260 0 0 chr5 141152525 141152598 -58477552 - L1ME1 LINE L1 -2040 5768 5696 785 243 78 67 chr5 141153061 141153661 -58476489 + L1MC5 LINE L1 7281 7887 -74 1022 152 35 15 chr5 141153720 141153918 -58476232 - MLT1B LTR MaLR -188 202 1 280 264 70 23 chr5 141154586 141154715 -58475435 + L1ME4a LINE L1 5619 5753 -368 30 0 0 0 chr5 141154799 141154829 -58475321 + AT_rich Low_complexity Low_complexity 1 30 0 434 316 132 34 chr5 141154910 141155441 -58474709 + L1MC4a LINE L1 5260 5842 -1966 334 146 24 0 chr5 141155465 141155547 -58474603 + (TA)n Simple_repeat Simple_repeat 1 84 0 225 0 0 0 chr5 141155547 141155572 -58474578 + (TG)n Simple_repeat Simple_repeat 2 26 0 845 272 93 80 chr5 141156618 141157231 -58472919 + L2 LINE L2 2230 2850 -464 250 313 166 21 chr5 141157276 141157560 -58472590 - L2 LINE L2 -126 3187 2863 353 373 49 18 chr5 141157632 141157857 -58472293 + L2 LINE L2 2847 3078 -194 334 311 35 14 chr5 141158071 141158215 -58471935 - MIR3 SINE MIR -13 195 48 568 251 235 0 chr5 141158942 141159129 -58471021 + MIR SINE MIR 28 258 -4 283 262 71 67 chr5 141159297 141159507 -58470643 + L1ME4a LINE L1 5883 6093 -28 2111 91 0 58 chr5 141159783 141160092 -58470058 + AluY SINE Alu 1 291 -20 1017 184 0 0 chr5 141160668 141160836 -58469314 - AluJb SINE Alu -10 302 135 180 0 0 0 chr5 141160857 141160877 -58469273 + (A)n Simple_repeat Simple_repeat 1 20 0 199 341 48 48 chr5 141162112 141162238 -58467912 + MER5A DNA MER1_type 63 188 -1 792 204 57 22 chr5 141162321 141162551 -58467599 - L1ME2 LINE L1 -76 6088 5851 302 295 115 0 chr5 141164036 141164158 -58465992 + L2 LINE L2 3137 3272 0 219 259 141 30 chr5 141164235 141164370 -58465780 + MER5A DNA MER1_type 40 189 0 559 218 192 32 chr5 141165460 141165616 -58464534 - MER5A DNA MER1_type 0 189 9 546 262 52 17 chr5 141165625 141165797 -58464353 - L2 LINE L2 -990 2324 2147 454 243 180 0 chr5 141167226 141167415 -58462735 - L1ME1 LINE L1 -17 6149 5927 2881 107 78 18 chr5 141168717 141169229 -58460921 - Tigger3(Golem) DNA MER2_type -1 3028 2486 10769 144 15 77 chr5 141169237 141171591 -58458559 + L1P LINE L1 9 2215 -3931 40780 53 4 1 chr5 141171592 141177722 -58452428 + L1PA5 LINE L1 5 6151 -3 2730 83 0 25 chr5 141177728 141178123 -58452027 + L1PA7 LINE L1 5769 6153 -1 1279 97 62 31 chr5 141178123 141178382 -58451768 - Tigger3(Golem) DNA MER2_type -538 2491 2225 444 222 0 0 chr5 141178380 141178461 -58451689 - Tigger3(Golem) DNA MER2_type -2947 82 2 * 239 108 0 0 chr5 141178475 141178512 -58451638 - Tigger3(Golem) DNA MER2_type -65 2964 2928 27 0 0 0 chr5 141178512 141178539 -58451611 + AT_rich Low_complexity Low_complexity 1 27 0 444 238 0 0 chr5 141178636 141178716 -58451434 - Tigger3(Golem) DNA MER2_type -2949 80 1 229 210 0 99 chr5 141179987 141180068 -58450082 + L3b LINE CR1 1305 1377 -206 392 235 20 10 chr5 141180264 141180366 -58449784 - MIR SINE MIR 0 262 160 582 264 68 23 chr5 141180495 141180715 -58449435 + MIR SINE MIR 33 262 0 241 311 10 19 chr5 141180718 141180821 -58449329 + MIR SINE MIR 72 173 -89 26 64 0 0 chr5 141180827 141180874 -58449276 + AT_rich Low_complexity Low_complexity 1 47 0 221 269 129 11 chr5 141180894 141180987 -58449163 + L2 LINE L2 2227 2330 -984 373 259 63 78 chr5 141181891 141181974 -58448176 - L1ME4a LINE L1 0 6121 6038 2404 90 0 0 chr5 141181974 141182273 -58447877 + AluSx SINE Alu 1 299 -13 373 259 63 78 chr5 141182273 141182444 -58447706 - L1ME4a LINE L1 -83 6038 5871 463 265 37 15 chr5 141182562 141182698 -58447452 + MIR SINE MIR 117 255 -7 375 295 93 30 chr5 141182727 141182995 -58447155 - L1ME4a LINE L1 -1277 4869 4585 241 268 51 25 chr5 141183324 141183481 -58446669 + MER103 DNA DNA 1 161 -5 270 212 15 15 chr5 141184612 141184678 -58445472 + GA-rich Low_complexity Low_complexity 3 68 0 2014 143 0 20 chr5 141185245 141185539 -58444611 - AluSx SINE Alu -24 288 1 40515 34 28 2 chr5 141186038 141191326 -58438824 + L1P2 LINE L1 6 5436 -719 1673 20 5 0 chr5 141191326 141191519 -58438631 + L1PA2 LINE L1 5956 6153 -2 628 160 0 0 chr5 141191544 141191650 -58438500 + MER41B LTR ERV1 442 547 -88 425 296 90 56 chr5 141192669 141193291 -58436859 + L1MEd LINE L1 511 1153 -4966 247 281 47 21 chr5 141193792 141193984 -58436166 + L1MEd LINE L1 1220 1416 -4894 239 211 11 111 chr5 141194013 141194103 -58436047 - L2 LINE L2 0 3313 3233 359 227 14 14 chr5 141194123 141194264 -58435886 + GA-rich Low_complexity Low_complexity 4 144 0 1013 218 26 23 chr5 141194426 141194707 -58435443 - MLT1D LTR MaLR 0 505 242 203 290 16 0 chr5 141194708 141194770 -58435380 + CT-rich Low_complexity Low_complexity 3 65 0 848 194 21 0 chr5 141194782 141194968 -58435182 - MLT1D LTR MaLR -270 235 46 2279 92 0 0 chr5 141195702 141195986 -58434164 + AluSx SINE Alu 12 295 -17 1208 153 5 14 chr5 141196384 141196599 -58433551 - AluSq SINE Alu -96 217 5 824 241 121 35 chr5 141197649 141198071 -58432079 + MLT1C LTR MaLR 1 467 0 1771 164 3 3 chr5 141198363 141198655 -58431495 - AluSx SINE Alu -20 292 1 472 290 39 0 chr5 141199692 141199847 -58430303 - L2 LINE L2 -402 2912 2752 192 345 36 36 chr5 141201872 141201982 -58428168 + L2 LINE L2 3144 3253 -19 311 262 117 10 chr5 141204121 141204224 -58425926 - MIR3 SINE MIR -14 194 81 834 291 58 8 chr5 141204575 141204833 -58425317 - AluJb SINE Alu -40 272 2 1214 202 16 24 chr5 141205270 141205517 -58424633 - MIR SINE MIR -5 257 13 551 98 11 0 chr5 141205982 141206074 -58424076 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 315 0 0 0 chr5 141206194 141206229 -58423921 + (TG)n Simple_repeat Simple_repeat 1 35 0 9850 20 1 0 chr5 141208160 141210081 -58420069 + L1PA2 LINE L1 4231 6153 -2 634 160 0 0 chr5 141210106 141210212 -58419938 + MER41B LTR ERV1 442 547 -88 426 296 90 56 chr5 141211231 141211853 -58418297 + L1MEd LINE L1 511 1153 -4966 257 288 47 16 chr5 141212354 141212545 -58417605 + L1MEd LINE L1 1220 1416 -4894 239 211 11 111 chr5 141212574 141212664 -58417486 - L2 LINE L2 0 3313 3233 320 209 9 26 chr5 141212684 141212799 -58417351 + GA-rich Low_complexity Low_complexity 4 116 0 1207 194 65 16 chr5 141212960 141213269 -58416881 - MLT1D LTR MaLR 0 505 182 1003 164 18 32 chr5 141213316 141213535 -58416615 - MLT1D LTR MaLR -270 235 20 322 271 130 48 chr5 141213586 141213793 -58416357 + L1MEd LINE L1 1455 1678 -4451 356 253 36 113 chr5 141214018 141214354 -58415796 + L1MEd LINE L1 2432 2741 -3388 667 164 112 87 chr5 141214374 141214686 -58415464 - MER33 DNA MER1_type -4 320 1 407 253 61 45 chr5 141214772 141214970 -58415180 + L1MEd LINE L1 2795 2995 -3134 2079 128 13 0 chr5 141215108 141215406 -58414744 - AluSx SINE Alu -10 302 1 403 263 45 38 chr5 141215687 141215820 -58414330 + MIR SINE MIR 83 216 -46 500 286 14 7 chr5 141215967 141216107 -58414043 + MIR SINE MIR 20 160 -102 4619 69 23 3 chr5 141216110 141216730 -58413420 + L1PA10 LINE L1 5535 6166 -2 339 222 30 59 chr5 141216739 141216874 -58413276 - LTR67 LTR ERVL 0 557 427 373 268 182 10 chr5 141216922 141217120 -58413030 - LTR67 LTR ERVL -239 318 87 231 266 16 0 chr5 141217229 141217293 -58412857 + MIR SINE MIR 157 221 -41 203 260 167 10 chr5 141218291 141218387 -58411763 - L2 LINE L2 -6 3307 3197 22 0 0 0 chr5 141220149 141220171 -58409979 + AT_rich Low_complexity Low_complexity 1 22 0 1394 105 46 14 chr5 141220474 141220693 -58409457 - AluSg/x SINE Alu -11 301 76 31 26 0 0 chr5 141221183 141221221 -58408929 + AT_rich Low_complexity Low_complexity 1 38 0 368 266 135 18 chr5 141221434 141221656 -58408494 - L1ME4a LINE L1 -81 6040 5793 2055 123 3 0 chr5 141221734 141222019 -58408131 - AluSx SINE Alu -5 307 22 23 0 0 0 chr5 141222038 141222061 -58408089 + AT_rich Low_complexity Low_complexity 1 23 0 212 207 17 17 chr5 141222842 141222900 -58407250 + T-rich Low_complexity Low_complexity 4 61 0 474 322 151 4 chr5 141224406 141224645 -58405505 - L2 LINE L2 -611 2703 2430 677 300 131 18 chr5 141224884 141225227 -58404923 - L3 LINE CR1 -13 1564 1183 412 193 101 3 chr5 141225300 141225410 -58404740 + MLT1J2 LTR MaLR 1 140 -306 546 266 103 16 chr5 141225467 141225651 -58404499 + MLT1J2 LTR MaLR 251 450 0 228 268 14 14 chr5 141225651 141225722 -58404428 + MLT1J2-int LTR MaLR 1 71 -1664 390 305 40 23 chr5 141226629 141226802 -58403348 + MLT1J1 LTR MaLR 1 219 -289 594 276 68 0 chr5 141226824 141226987 -58403163 + MLT1J2 LTR MaLR 277 450 0 369 316 74 8 chr5 141226991 141227142 -58403008 - MIR SINE MIR -45 163 1 * 603 313 124 23 chr5 141227142 141227533 -58402617 - L3 LINE CR1 -394 1183 753 203 174 304 18 chr5 141227639 141227727 -58402423 - MIR SINE MIR -28 180 63 297 226 255 10 chr5 141228033 141228135 -58402015 + L2 LINE L2 3146 3272 0 299 25 25 0 chr5 141228320 141228360 -58401790 + (CA)n Simple_repeat Simple_repeat 1 41 0 513 145 0 26 chr5 141228869 141228986 -58401164 + (TTCC)n Simple_repeat Simple_repeat 3 116 0 230 357 8 56 chr5 141229657 141229783 -58400367 + L3b LINE CR1 1432 1551 -32 941 240 60 104 chr5 141230584 141231054 -58399096 + MER21B LTR ERV1 258 706 -157 1615 183 54 4 chr5 141231338 141231617 -58398533 + AluJb SINE Alu 2 294 -18 323 233 117 10 chr5 141231943 141232046 -58398104 + MIR3 SINE MIR 81 194 -14 207 0 0 0 chr5 141232638 141232661 -58397489 + (TTG)n Simple_repeat Simple_repeat 2 24 0 580 193 17 17 chr5 141234191 141234310 -58395840 - Tigger7 DNA MER2_type -431 119 1 236 146 36 0 chr5 141239104 141239159 -58390991 + GA-rich Low_complexity Low_complexity 1 57 0 637 217 94 17 chr5 141240300 141240480 -58389670 + MIR SINE MIR 68 261 -1 395 286 134 35 chr5 141240572 141240743 -58389407 + MIR SINE MIR 2 189 -73 348 353 39 20 chr5 141240842 141240995 -58389155 - L2 LINE L2 -12 3260 3105 266 359 46 0 chr5 141241041 141241172 -58388978 + L2 LINE L2 2940 3076 -196 1559 111 5 5 chr5 141241327 141241544 -58388606 + AluSq SINE Alu 1 217 -96 2580 141 19 2 chr5 141241554 141241981 -58388169 + L1MB3 LINE L1 5750 6183 0 1281 237 138 47 chr5 141243737 141244244 -58385906 + MLT1H1 LTR MaLR 1 553 -2 2238 115 0 0 chr5 141244351 141244646 -58385504 + AluSx SINE Alu 1 295 -17 402 221 153 99 chr5 141244849 141245071 -58385079 - MIR SINE MIR -21 241 8 342 0 0 0 chr5 141245107 141245145 -58385005 + (CA)n Simple_repeat Simple_repeat 2 39 0 551 98 11 0 chr5 141245265 141245357 -58384793 + (TAGA)n Simple_repeat Simple_repeat 4 96 0 1192 199 17 25 chr5 141245822 141246063 -58384087 + MIR SINE MIR 13 251 -11 207 0 0 0 chr5 141246303 141246326 -58383824 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1270 257 16 45 chr5 141246755 141247133 -58383017 - MLT1H LTR MaLR -143 406 40 28 71 0 0 chr5 141247908 141247964 -58382186 + AT_rich Low_complexity Low_complexity 1 56 0 354 197 66 0 chr5 141248049 141248125 -58382025 + MLT1A2 LTR MaLR 1 81 -293 * 899 216 12 6 chr5 141248113 141248280 -58381870 + MLT1A2 LTR MaLR 205 372 -2 2045 135 3 3 chr5 141248292 141248589 -58381561 + AluSx SINE Alu 1 297 -15 1137 218 146 41 chr5 141248876 141249294 -58380856 - MLT1C LTR MaLR 0 467 6 467 33 16 0 chr5 141249399 141249460 -58380690 + (TG)n Simple_repeat Simple_repeat 1 62 0 261 0 0 0 chr5 141250281 141250310 -58379840 + (TG)n Simple_repeat Simple_repeat 2 30 0 1595 269 52 9 chr5 141251271 141251757 -58378393 + L2 LINE L2 2420 2921 -351 21 71 0 0 chr5 141254047 141254089 -58376061 + AT_rich Low_complexity Low_complexity 1 42 0 347 254 64 0 chr5 141254208 141254318 -58375832 + MIR SINE MIR 130 246 -16 198 316 13 13 chr5 141255687 141255763 -58374387 + L2 LINE L2 3238 3313 0 21 0 0 0 chr5 141256294 141256315 -58373835 + AT_rich Low_complexity Low_complexity 1 21 0 201 176 0 0 chr5 141257559 141257593 -58372557 + (TA)n Simple_repeat Simple_repeat 1 34 0 25 0 0 0 chr5 141261708 141261733 -58368417 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 141263659 141263680 -58366470 + AT_rich Low_complexity Low_complexity 1 21 0 622 279 48 6 chr5 141264324 141264489 -58365661 - MER91A DNA MER1_type -12 184 13 420 356 48 61 chr5 141264997 141265373 -58364777 + L2 LINE L2 2901 3271 -1 264 122 0 0 chr5 141265385 141265426 -58364724 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 405 280 115 19 chr5 141265845 141266002 -58364148 - MIR3 SINE MIR -1 207 36 22 35 0 0 chr5 141268130 141268159 -58361991 + AT_rich Low_complexity Low_complexity 1 29 0 293 305 182 13 chr5 141268567 141268721 -58361429 + MIR3 SINE MIR 5 184 -24 2005 117 7 17 chr5 141269770 141270068 -58360082 - AluJb SINE Alu -17 295 1 183 42 0 0 chr5 141270202 141270226 -58359924 + (T)n Simple_repeat Simple_repeat 1 24 0 699 215 6 0 chr5 141270256 141270414 -58359736 + MER3 DNA MER1_type 28 186 -23 22 35 0 0 chr5 141271747 141271776 -58358374 + AT_rich Low_complexity Low_complexity 1 29 0 1274 158 35 0 chr5 141272233 141272461 -58357689 + MER46A DNA MER2_type 1 236 0 2485 61 0 0 chr5 141273291 141273587 -58356563 - AluY SINE Alu -15 296 1 520 307 7 7 chr5 141276563 141276713 -58353437 + MIR SINE MIR 8 157 -105 216 316 202 10 chr5 141276733 141276926 -58353224 + MIR SINE MIR 23 252 -10 438 250 216 27 chr5 141277810 141277958 -58352192 + MER5B DNA MER1_type 3 178 0 341 307 0 10 chr5 141277958 141278059 -58352091 - MIR3 SINE MIR -48 160 61 351 263 26 0 chr5 141278194 141278308 -58351842 + (TA)n Simple_repeat Simple_repeat 2 118 0 2402 84 3 0 chr5 141278808 141279104 -58351046 + AluSp SINE Alu 1 297 -16 552 175 0 36 chr5 141279166 141279303 -58350847 + L1MA4A LINE L1 5991 6122 -181 404 161 0 0 chr5 141279303 141279365 -58350785 + AluJ/FRAM SINE Alu 231 292 -20 528 278 15 0 chr5 141279769 141279902 -58350248 - L2 LINE L2 0 3272 3138 240 257 0 99 chr5 141279980 141280081 -58350069 - HsTC2 DNA Tc2 -1807 91 1 255 293 9 52 chr5 141280559 141280675 -58349475 - L2 LINE L2 -517 2797 2687 245 180 20 0 chr5 141280675 141280725 -58349425 + L1MC/D LINE L1 5865 5915 -1893 676 299 167 8 chr5 141280968 141281369 -58348781 - L2 LINE L2 -620 2694 2230 529 254 51 42 chr5 141281372 141281770 -58348380 - LTR16A LTR ERVL 0 450 7 421 329 113 29 chr5 141281916 141282226 -58347924 - L1MEd LINE L1 -5510 609 274 1839 260 47 22 chr5 141284376 141285268 -58344882 + L2 LINE L2 2405 3313 0 300 341 32 24 chr5 141286476 141286599 -58343551 + L2 LINE L2 3139 3262 -10 182 270 36 117 chr5 141290087 141290198 -58339952 + MIR SINE MIR 20 121 -87 197 115 0 96 chr5 141291215 141291267 -58338883 + (A)n Simple_repeat Simple_repeat 1 47 0 248 53 26 0 chr5 141291955 141291993 -58338157 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 257 42 0 83 chr5 141292308 141292356 -58337794 + (TTTTTG)n Simple_repeat Simple_repeat 2 45 0 356 385 11 11 chr5 141293055 141293237 -58336913 + L2 LINE L2 2458 2639 -675 356 243 128 88 chr5 141293982 141294281 -58335869 + MER102a DNA MER1_type 7 328 -2 461 308 44 11 chr5 141294851 141295033 -58335117 - MIR3 SINE MIR -16 192 5 187 316 0 18 chr5 141295374 141295431 -58334719 + L2 LINE L2 3199 3254 -18 546 317 46 42 chr5 141296173 141296413 -58333737 + MIR SINE MIR 4 244 -18 195 315 99 63 chr5 141296548 141296659 -58333491 + L2 LINE L2 3190 3304 -9 315 0 0 0 chr5 141299165 141299200 -58330950 + (TC)n Simple_repeat Simple_repeat 2 36 0 459 266 84 7 chr5 141301050 141301193 -58328957 - L2 LINE L2 -3 3269 3116 363 259 24 12 chr5 141301389 141301474 -58328676 + L2 LINE L2 3152 3237 -35 251 277 24 0 chr5 141301501 141301584 -58328566 + (TGGA)n Simple_repeat Simple_repeat 1 85 0 339 65 0 0 chr5 141303287 141303333 -58326817 + (CA)n Simple_repeat Simple_repeat 2 47 0 180 77 0 0 chr5 141303544 141303570 -58326580 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 234 0 0 0 chr5 141303576 141303602 -58326548 + (T)n Simple_repeat Simple_repeat 1 26 0 344 342 79 0 chr5 141304084 141304236 -58325914 + MIR3 SINE MIR 42 205 -3 247 232 174 0 chr5 141304621 141304690 -58325460 + MIR SINE MIR 164 244 -18 338 333 106 0 chr5 141304870 141305011 -58325139 + MIR SINE MIR 79 234 -28 23 0 0 0 chr5 141305331 141305354 -58324796 + AT_rich Low_complexity Low_complexity 1 23 0 1881 110 90 34 chr5 141307254 141307609 -58322541 - THE1C LTR MaLR 0 375 1 233 247 94 0 chr5 141308473 141308558 -58321592 + MER113 DNA MER1_type? 1 93 -428 2233 64 3 10 chr5 141308682 141308978 -58321172 - L1PA7 LINE L1 0 6154 5861 217 250 44 100 chr5 141308986 141309146 -58321004 + MIR SINE MIR 1 151 -111 599 277 91 41 chr5 141309342 141309584 -58320566 - MIR SINE MIR 0 262 9 24 0 0 0 chr5 141310527 141310551 -58319599 + AT_rich Low_complexity Low_complexity 1 24 0 35 24 0 0 chr5 141313667 141313709 -58316441 + AT_rich Low_complexity Low_complexity 1 42 0 811 294 18 5 chr5 141314411 141314629 -58315521 - MIR SINE MIR 0 262 42 302 349 30 0 chr5 141314853 141314985 -58315165 + MIR SINE MIR 106 241 -21 1810 174 42 5 chr5 141315012 141315391 -58314759 - L1MA4 LINE L1 0 6300 5908 2336 103 0 7 chr5 141315621 141315923 -58314227 + AluSp SINE Alu 1 300 -13 203 292 11 0 chr5 141316091 141316180 -58313970 + GA-rich Low_complexity Low_complexity 4 93 0 855 121 6 33 chr5 141316185 141316367 -58313783 + (GGGAA)n Simple_repeat Simple_repeat 2 178 0 227 250 0 0 chr5 141316367 141316447 -58313703 + GA-rich Low_complexity Low_complexity 3 82 0 969 124 0 17 chr5 141316584 141316627 -58313523 + (GGGAA)n Simple_repeat Simple_repeat 1 217 0 969 124 0 17 chr5 141316627 141316805 -58313345 + (GGGAA)n Simple_repeat Simple_repeat 4 178 0 7262 51 0 0 chr5 141317356 141319142 -58311008 + L1PA6 LINE L1 4453 6246 0 2220 118 0 0 chr5 141319481 141319777 -58310373 + AluSx SINE Alu 1 296 -16 307 328 88 0 chr5 141323616 141323808 -58306342 + L1ME4a LINE L1 5473 5681 -440 241 303 67 8 chr5 141324039 141324158 -58305992 + L1ME4a LINE L1 5961 6086 -35 240 349 8 30 chr5 141324511 141324626 -58305524 - MER5A DNA MER1_type -4 185 61 2296 100 0 3 chr5 141324626 141324936 -58305214 - AluSg SINE Alu -1 309 1 240 349 8 30 chr5 141324936 141324952 -58305198 - MER5A DNA MER1_type -128 61 46 385 254 98 40 chr5 141324989 141325264 -58304886 + L1MC5 LINE L1 7499 7789 -172 963 187 0 0 chr5 141325278 141325444 -58304706 + FRAM SINE Alu 1 40 0 222 303 73 9 chr5 141325861 141325970 -58304180 - MIR SINE MIR -56 206 91 25 0 0 0 chr5 141326319 141326344 -58303806 + AT_rich Low_complexity Low_complexity 1 25 0 29 60 0 0 chr5 141326833 141326883 -58303267 + AT_rich Low_complexity Low_complexity 1 50 0 183 80 0 0 chr5 141327981 141328006 -58302144 + (GAAAA)n Simple_repeat Simple_repeat 5 29 0 377 265 30 15 chr5 141328778 141328910 -58301240 + L2 LINE L2 3139 3272 0 254 361 0 0 chr5 141330947 141331019 -58299131 + polypurine Low_complexity Low_complexity 2 73 0 224 277 23 39 chr5 141331731 141331861 -58298289 + L2 LINE L2 2142 2269 -1045 483 261 142 9 chr5 141331877 141332095 -58298055 + L2 LINE L2 2646 2892 -422 297 261 0 0 chr5 141332170 141332262 -58297888 + MER53 DNA DNA 8 99 -90 480 234 49 119 chr5 141333174 141333418 -58296732 + MIR SINE MIR 8 234 -28 1119 177 68 23 chr5 141333537 141333803 -58296347 + L1MC2 LINE L1 6066 6343 -1 216 0 0 0 chr5 141333999 141334023 -58296127 + (A)n Simple_repeat Simple_repeat 1 24 0 2314 76 30 0 chr5 141335085 141335387 -58294763 - AluY SINE Alu 0 311 1 257 315 0 22 chr5 141335412 141335501 -58294649 + MER5A DNA MER1_type 38 124 -65 773 164 0 26 chr5 141335577 141335729 -58294421 - L1MB2 LINE L1 0 6171 6024 22 0 0 0 chr5 141335729 141335751 -58294399 + AT_rich Low_complexity Low_complexity 1 22 0 2365 84 10 0 chr5 141335940 141336249 -58293901 + AluSp SINE Alu 2 313 0 1884 117 78 0 chr5 141336252 141336534 -58293616 + AluSq SINE Alu 1 304 -9 25 31 0 0 chr5 141338265 141338297 -58291853 + AT_rich Low_complexity Low_complexity 1 32 0 24 53 0 0 chr5 141342385 141342423 -58287727 + AT_rich Low_complexity Low_complexity 1 38 0 286 198 58 12 chr5 141345574 141345660 -58284490 + L2 LINE L2 3224 3313 0 22 0 0 0 chr5 141347034 141347056 -58283094 + GC_rich Low_complexity Low_complexity 1 22 0 213 139 0 0 chr5 141347476 141347519 -58282631 + (TC)n Simple_repeat Simple_repeat 2 44 0 195 269 109 50 chr5 141349281 141349400 -58280750 - MIR SINE MIR -108 154 29 180 0 0 0 chr5 141352343 141352363 -58277787 + (GA)n Simple_repeat Simple_repeat 1 20 0 29 28 0 0 chr5 141354179 141354215 -58275935 + AT_rich Low_complexity Low_complexity 1 36 0 35 0 0 0 chr5 141356125 141356160 -58273990 + GC_rich Low_complexity Low_complexity 1 35 0 206 205 0 0 chr5 141356293 141356332 -58273818 + (CCG)n Simple_repeat Simple_repeat 3 41 0 260 298 18 9 chr5 141356379 141356493 -58273657 + (CGG)n Simple_repeat Simple_repeat 2 116 0 186 118 0 0 chr5 141356494 141356528 -58273622 + (GGA)n Simple_repeat Simple_repeat 3 36 0 205 171 0 0 chr5 141356603 141356644 -58273506 + (CGG)n Simple_repeat Simple_repeat 1 41 0 321 47 0 0 chr5 141357599 141357642 -58272508 + (TG)n Simple_repeat Simple_repeat 1 43 0 * 360 0 0 0 chr5 141357641 141357681 -58272469 + (GA)n Simple_repeat Simple_repeat 1 40 0 212 236 0 55 chr5 141357683 141357738 -58272412 + polypurine Low_complexity Low_complexity 2 53 0 361 298 88 11 chr5 141359523 141359704 -58270446 - MIR SINE MIR -15 247 53 375 310 25 15 chr5 141361449 141361646 -58268504 - L2 LINE L2 -124 3189 2991 477 238 0 0 chr5 141364441 141364521 -58265629 + Tigger3(Golem) DNA MER2_type 1 80 -2949 27 0 0 0 chr5 141364618 141364645 -58265505 + AT_rich Low_complexity Low_complexity 1 27 0 260 108 0 0 chr5 141364645 141364682 -58265468 + Tigger3(Golem) DNA MER2_type 2928 2964 -65 474 222 0 0 chr5 141364696 141364777 -58265373 + Tigger3(Golem) DNA MER2_type 2 82 -2947 * 1393 97 62 31 chr5 141364775 141365034 -58265116 + Tigger3(Golem) DNA MER2_type 2225 2491 -538 2742 89 0 25 chr5 141365034 141365429 -58264721 - L1PA7 LINE L1 -1 6153 5769 21808 36 5 1 chr5 141365435 141368830 -58261320 - L1PA5 LINE L1 -3 6151 2747 531 0 0 0 chr5 141419027 141419086 -58211064 + (TAATG)n Simple_repeat Simple_repeat 2 60 0 484 253 103 35 chr5 141419464 141419638 -58210512 + ERVL LTR ERVL 4504 4689 -1075 272 319 181 0 chr5 141421149 141421293 -58208857 + L2 LINE L2 2524 2693 -621 516 87 22 54 chr5 141421294 141421386 -58208764 - THE1B LTR MaLR -82 282 194 2361 116 0 0 chr5 141421406 141421717 -58208433 - AluSx SINE Alu -1 311 1 315 264 0 14 chr5 141421941 141422013 -58208137 - L2 LINE L2 -47 3266 3196 353 295 34 82 chr5 141422040 141422062 -58208088 + L1ME4a LINE L1 5566 5588 -533 25 31 0 0 chr5 141422062 141422094 -58208056 + AT_rich Low_complexity Low_complexity 1 32 0 353 295 34 82 chr5 141422094 141422247 -58207903 + L1ME4a LINE L1 5588 5762 -359 1607 154 56 11 chr5 141422306 141422573 -58207577 + AluJb SINE Alu 1 279 -33 322 299 137 40 chr5 141422612 141422740 -58207410 + L1ME4a LINE L1 5795 5909 -212 1966 110 3 23 chr5 141422740 141423040 -58207110 - AluSx SINE Alu -18 294 1 322 299 137 40 chr5 141423040 141423079 -58207071 + L1ME4a LINE L1 5909 5943 -178 1680 195 10 7 chr5 141423079 141423377 -58206773 - AluJo SINE Alu -7 305 7 322 299 137 40 chr5 141423377 141423451 -58206699 + L1ME4a LINE L1 5943 6008 -113 2182 93 42 7 chr5 141423451 141423740 -58206410 - AluSp SINE Alu -13 300 2 322 299 137 40 chr5 141423740 141423774 -58206376 + L1ME4a LINE L1 6008 6099 -22 530 243 14 86 chr5 141423834 141424079 -58206071 - MIR SINE MIR -1 261 37 2416 78 0 7 chr5 141424079 141424385 -58205765 - AluY SINE Alu -7 304 1 530 243 14 86 chr5 141424385 141424419 -58205731 - MIR SINE MIR -225 37 2 193 0 0 86 chr5 141424874 141424909 -58205241 + (TTTTTG)n Simple_repeat Simple_repeat 6 37 0 905 282 79 28 chr5 141425308 141425702 -58204448 + LTR33 LTR ERVL 56 469 -52 2324 105 0 3 chr5 141425900 141426213 -58203937 + AluSx SINE Alu 1 312 0 1802 199 0 0 chr5 141426226 141426532 -58203618 + AluJb SINE Alu 1 306 -6 909 115 12 18 chr5 141426537 141426702 -58203448 + (GAAA)n Simple_repeat Simple_repeat 1 164 0 831 250 84 1 chr5 141427138 141427410 -58202740 + MLT2E LTR ERVL 1 329 -299 385 244 59 0 chr5 141427695 141427814 -58202336 - MIR SINE MIR 0 262 137 28 48 0 0 chr5 141428042 141428084 -58202066 + AT_rich Low_complexity Low_complexity 1 42 0 577 145 0 151 chr5 141428286 141428465 -58201685 - L1MB8 LINE L1 0 6178 6027 2257 85 0 0 chr5 141428617 141428933 -58201217 - AluSg SINE Alu 0 316 1 2323 104 3 0 chr5 141428938 141429245 -58200905 - AluSp SINE Alu -5 308 1 1026 141 6 6 chr5 141431631 141431808 -58198342 + MLT1B LTR MaLR 1 177 -213 1547 178 83 4 chr5 141431810 141432086 -58198064 + AluJo SINE Alu 1 298 -14 1276 103 11 0 chr5 141432089 141432288 -58197862 + AluSg/x SINE Alu 131 331 0 2349 82 0 10 chr5 141432293 141432585 -58197565 + AluSc SINE Alu 3 291 -18 2125 78 0 23 chr5 141432732 141433040 -58197110 + AluY SINE Alu 1 301 -10 621 0 0 0 chr5 141433286 141433355 -58196795 + (CATTA)n Simple_repeat Simple_repeat 2 70 0 322 391 80 23 chr5 141434377 141434727 -58195423 + L1MEd LINE L1 247 616 -5503 21 89 0 0 chr5 141435462 141435518 -58194632 + AT_rich Low_complexity Low_complexity 1 56 0 312 254 164 16 chr5 141437080 141437202 -58192948 - MIR SINE MIR -13 249 110 288 239 63 44 chr5 141437205 141437364 -58192786 + MER113 DNA MER1_type? 19 180 -341 3527 176 10 42 chr5 141437417 141437541 -58192609 + L1MB7 LINE L1 5442 5568 -616 2438 72 7 0 chr5 141437541 141437847 -58192303 + AluSp SINE Alu 1 308 -5 3527 176 10 42 chr5 141437847 141438489 -58191661 + L1MB7 LINE L1 5568 6184 0 450 240 50 0 chr5 141438780 141438880 -58191270 + MIR SINE MIR 46 150 -112 22 70 0 0 chr5 141439274 141439317 -58190833 + AT_rich Low_complexity Low_complexity 1 43 0 450 36 0 0 chr5 141440446 141440502 -58189648 + (TG)n Simple_repeat Simple_repeat 1 56 0 35 0 0 0 chr5 141440902 141440937 -58189213 + AT_rich Low_complexity Low_complexity 1 35 0 305 301 6 6 chr5 141441032 141441195 -58188955 + L1ME4a LINE L1 5265 5427 -737 7276 101 92 8 chr5 141441256 141441940 -58188210 + HSMAR2 DNA Mariner 2 627 -675 2125 99 155 16 chr5 141441940 141442314 -58187836 - MSTA LTR MaLR -2 426 1 7276 101 92 8 chr5 141442314 141442821 -58187329 + HSMAR2 DNA Mariner 627 1293 -9 772 145 0 8 chr5 141442827 141442944 -58187206 - FLAM_C SINE Alu -27 116 1 436 262 134 57 chr5 141442997 141443198 -58186952 + L1ME4a LINE L1 5515 5699 -422 231 36 0 0 chr5 141443198 141443226 -58186924 + (TG)n Simple_repeat Simple_repeat 1 28 0 436 262 134 57 chr5 141443226 141443585 -58186565 + L1ME4a LINE L1 5699 6118 -3 21 0 0 0 chr5 141443991 141444012 -58186138 + AT_rich Low_complexity Low_complexity 1 21 0 2081 157 3 9 chr5 141444433 141444777 -58185373 - MER2 DNA MER2_type 0 344 3 646 253 48 44 chr5 141445272 141445501 -58184649 + MIR SINE MIR 5 234 -28 364 309 49 24 chr5 141446825 141446948 -58183202 + MER5A DNA MER1_type 18 143 -46 203 77 58 19 chr5 141446957 141447009 -58183141 + (TA)n Simple_repeat Simple_repeat 2 55 0 391 222 102 0 chr5 141447264 141447372 -58182778 + MER103 DNA DNA 4 122 -44 2299 109 0 3 chr5 141448862 141449175 -58180975 - AluSq SINE Alu -1 312 1 215 111 0 22 chr5 141449255 141449300 -58180850 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 5896 57 6 2 chr5 141449316 141450101 -58180049 - L1PA8 LINE L1 -25 6147 5360 2489 76 0 22 chr5 141450116 141450433 -58179717 - AluY SINE Alu -1 310 1 6447 88 5 0 chr5 141450433 141451099 -58179051 - L1PA13 LINE L1 -6 6157 5496 258 95 0 0 chr5 141451099 141451141 -58179009 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 2291 67 0 0 chr5 141451141 141451423 -58178727 - AluY SINE Alu -29 282 1 6447 88 5 0 chr5 141451423 141451720 -58178430 - L1PA13 LINE L1 -666 5497 5193 199 354 125 47 chr5 141452145 141452529 -58177621 - L2 LINE L2 -347 2967 2554 246 235 37 37 chr5 141452855 141452936 -58177214 - L2 LINE L2 -8 3305 3225 353 303 66 8 chr5 141453463 141453585 -58176565 - L2 LINE L2 -1 3312 3184 1578 184 41 6 chr5 141453606 141453926 -58176224 - MSTB1 LTR MaLR -98 334 4 531 277 108 17 chr5 141454342 141454573 -58175577 + MIR SINE MIR 10 261 -1 2069 142 48 13 chr5 141454594 141454968 -58175182 - L1MB7 LINE L1 -16 6168 5782 2409 130 7 12 chr5 141454979 141455394 -58174756 - L1MB7 LINE L1 -488 5696 5284 768 162 0 0 chr5 141455618 141455735 -58174415 - AluJb SINE Alu -38 274 158 279 0 0 0 chr5 141455916 141455947 -58174203 + (CAG)n Simple_repeat Simple_repeat 2 32 0 1766 172 0 20 chr5 141456770 141456930 -58173220 - AluJb SINE Alu -21 291 138 2058 129 3 3 chr5 141456930 141457241 -58172909 - AluSx SINE Alu -1 311 1 1766 172 0 20 chr5 141457241 141457377 -58172773 - AluJb SINE Alu -174 138 1 305 114 0 0 chr5 141457442 141457486 -58172664 - U6 snRNA snRNA -62 45 2 1346 139 27 9 chr5 141457551 141457774 -58172376 - AluJb SINE Alu 0 312 86 328 274 97 52 chr5 141457824 141458072 -58172078 + L1M4 LINE L1 4094 4352 -1794 1315 141 0 15 chr5 141458192 141458391 -58171759 + AluSc SINE Alu 2 197 -112 601 203 21 0 chr5 141458391 141458534 -58171616 + L1M4 LINE L1 2763 2908 -3238 806 244 5 21 chr5 141458534 141458727 -58171423 + AluJb SINE Alu 86 275 -37 360 0 0 0 chr5 141458732 141458772 -58171378 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 426 204 15 45 chr5 141458772 141458904 -58171246 + L1M4 LINE L1 2899 3026 -3120 282 271 38 75 chr5 141458946 141459001 -58171149 + L1M4 LINE L1 2317 2373 -3773 2037 141 0 0 chr5 141459001 141459292 -58170858 - AluSx SINE Alu -21 291 1 282 271 38 75 chr5 141459292 141459502 -58170648 + L1M4 LINE L1 2373 2572 -3574 534 278 61 14 chr5 141459510 141459856 -58170294 + L1M4 LINE L1 3104 3465 -2681 971 152 56 10 chr5 141459856 141460053 -58170097 + MSTD LTR MaLR 1 206 -190 362 208 17 133 chr5 141460094 141460267 -58169883 + MSTD LTR MaLR 194 346 -50 393 297 67 44 chr5 141460728 141460951 -58169199 + MIR SINE MIR 1 222 -40 337 306 137 32 chr5 141461327 141461546 -58168604 - MIR SINE MIR -13 249 8 318 333 52 0 chr5 141461715 141461850 -58168300 + L3b LINE CR1 1340 1481 -102 431 18 18 0 chr5 141462141 141462197 -58167953 + (CA)n Simple_repeat Simple_repeat 1 57 0 2462 113 26 8 chr5 141462541 141462929 -58167221 + L1PA11 LINE L1 5780 6174 0 285 29 0 0 chr5 141463653 141463687 -58166463 + (CA)n Simple_repeat Simple_repeat 2 35 0 11967 36 5 6 chr5 141464210 141466418 -58163732 + L1PA5 LINE L1 3942 6148 -6 231 123 0 53 chr5 141466421 141466478 -58163672 + (TAAAAA)n Simple_repeat Simple_repeat 6 59 0 440 351 8 8 chr5 141466627 141466758 -58163392 + MIR3 SINE MIR 15 145 -63 257 289 33 0 chr5 141466816 141466906 -58163244 + L2 LINE L2 291 383 -2931 22 0 0 0 chr5 141466932 141466954 -58163196 + AT_rich Low_complexity Low_complexity 1 22 0 517 69 0 0 chr5 141467145 141467217 -58162933 + MER41B LTR ERV1 477 548 -87 3231 129 18 23 chr5 141467233 141467831 -58162319 + L1 LINE L1 4071 4665 -1481 194 342 0 13 chr5 141467885 141467961 -58162189 + L2 LINE L2 2326 2400 -914 1587 209 22 19 chr5 141467961 141468272 -58161878 - AluJo SINE Alu 0 312 1 24 0 0 0 chr5 141468282 141468306 -58161844 + AT_rich Low_complexity Low_complexity 1 24 0 464 401 99 0 chr5 141468313 141468597 -58161553 + L2 LINE L2 2941 3252 -20 2358 92 3 0 chr5 141468722 141469016 -58161134 + AluSp SINE Alu 1 295 -18 2227 108 7 3 chr5 141469166 141469473 -58160677 + AluSx SINE Alu 1 308 -4 250 277 89 62 chr5 141470757 141470869 -58159281 + MER5A DNA MER1_type 61 175 -14 218 184 0 0 chr5 141471910 141471948 -58158202 + (TG)n Simple_repeat Simple_repeat 2 39 0 298 287 104 35 chr5 141471991 141472106 -58158044 + MIR SINE MIR 22 144 -64 223 206 16 16 chr5 141473420 141473483 -58156667 + GA-rich Low_complexity Low_complexity 1 63 0 184 283 17 17 chr5 141473708 141473768 -58156382 + L2 LINE L2 3175 3234 -38 590 258 163 14 chr5 141473844 141473987 -58156163 + MIR SINE MIR 2 187 -75 2320 103 3 0 chr5 141473987 141474287 -58155863 - AluSp SINE Alu -12 301 1 590 258 163 14 chr5 141474287 141474352 -58155798 + MIR SINE MIR 187 241 -21 344 250 50 0 chr5 141474379 141474459 -58155691 + MER91C DNA MER1_type 36 119 -21 1993 160 3 7 chr5 141475347 141475653 -58154497 - AluJb SINE Alu -7 305 1 2151 122 0 22 chr5 141475862 141476181 -58153969 + AluSx SINE Alu 1 312 0 1979 148 0 3 chr5 141476287 141476633 -58153517 + AluSx SINE Alu 1 312 0 235 277 0 0 chr5 141476635 141476682 -58153468 + polypurine Low_complexity Low_complexity 3 49 0 256 149 0 0 chr5 141476785 141476832 -58153318 - Alu SINE Alu -7 293 247 1142 139 6 0 chr5 141477061 141477234 -58152916 - THE1B LTR MaLR -190 174 1 306 301 64 0 chr5 141477323 141477526 -58152624 + L1MC4a LINE L1 5678 5893 -1915 21 71 0 0 chr5 141477951 141477993 -58152157 + AT_rich Low_complexity Low_complexity 1 42 0 2311 117 3 0 chr5 141478154 141478462 -58151688 + AluSg SINE Alu 1 309 -1 536 312 21 0 chr5 141479747 141479903 -58150247 - MIR3 SINE MIR -20 188 29 1688 155 36 67 chr5 141481025 141481412 -58148738 - THE1C LTR MaLR 0 375 1 447 312 80 19 chr5 141481784 141481994 -58148156 + MIR SINE MIR 12 235 -27 698 213 0 0 chr5 141482088 141482215 -58147935 + FLAM_A SINE Alu 1 127 -6 668 227 80 49 chr5 141482691 141482916 -58147234 + MIR SINE MIR 25 256 -6 183 211 53 0 chr5 141483048 141483105 -58147045 + L2 LINE L2 1941 2000 -1314 202 280 210 10 chr5 141483817 141483917 -58146233 + L2 LINE L2 3145 3264 -8 241 279 101 16 chr5 141484500 141484629 -58145521 - MIR SINE MIR -57 205 66 502 234 89 37 chr5 141485536 141485750 -58144400 - MLT1L LTR MaLR 0 615 391 326 221 88 9 chr5 141485743 141485856 -58144294 - MLT1L LTR MaLR -347 268 147 * 273 247 82 12 chr5 141485944 141486029 -58144121 - MLT1L LTR MaLR -524 91 1 2232 110 17 3 chr5 141486683 141486984 -58143166 - AluSx SINE Alu -7 305 1 1710 179 19 32 chr5 141487351 141487663 -58142487 - AluJo SINE Alu -4 308 1 2392 87 0 0 chr5 141488183 141488483 -58141667 - AluSg SINE Alu -10 300 1 327 342 50 8 chr5 141488954 141489074 -58141076 + L3 LINE CR1 1447 1571 -6 5300 18 3 0 chr5 141489803 141490750 -58139400 - L1PA3 LINE L1 -469 5686 4736 3759 39 4 0 chr5 141490750 141491206 -58138944 + L1PA3 LINE L1 5694 6152 -3 254 154 0 64 chr5 141491352 141491430 -58138720 + (TA)n Simple_repeat Simple_repeat 1 73 0 181 78 47 47 chr5 141491434 141491498 -58138652 + (TATAG)n Simple_repeat Simple_repeat 2 65 0 866 108 0 0 chr5 141491598 141491709 -58138441 + AluSc SINE Alu 181 291 -18 2515 59 0 0 chr5 141491856 141492159 -58137991 + AluY SINE Alu 1 303 -8 201 339 34 0 chr5 141492526 141492585 -58137565 + L2 LINE L2 3197 3257 -56 180 0 0 0 chr5 141493582 141493602 -58136548 + (A)n Simple_repeat Simple_repeat 1 20 0 2085 158 44 72 chr5 141494218 141494743 -58135407 + LTR54 LTR ERV1 1 510 0 267 234 0 43 chr5 141494761 141494855 -58135295 - L1MC4 LINE L1 -1339 6703 6614 * 282 239 23 0 chr5 141494773 141494861 -58135289 + L1MC4 LINE L1 6614 6703 -1339 243 0 0 0 chr5 141494861 141494888 -58135262 + (TA)n Simple_repeat Simple_repeat 1 27 0 2053 151 0 7 chr5 141494888 141495193 -58134957 - AluJb SINE Alu -9 303 1 180 0 0 0 chr5 141495244 141495264 -58134886 + (T)n Simple_repeat Simple_repeat 1 20 0 303 266 73 57 chr5 141495512 141495636 -58134514 + L2 LINE L2 1462 1587 -1727 241 283 116 6 chr5 141495710 141495883 -58134267 + L1ME4a LINE L1 5843 6034 -87 25 0 0 0 chr5 141495951 141495976 -58134174 + AT_rich Low_complexity Low_complexity 1 25 0 680 247 12 24 chr5 141496095 141496261 -58133889 + MER5A DNA MER1_type 26 189 0 2196 109 3 29 chr5 141496522 141496834 -58133316 + AluSx SINE Alu 1 304 -8 21 36 0 0 chr5 141497407 141497435 -58132715 + AT_rich Low_complexity Low_complexity 1 28 0 766 189 0 8 chr5 141497589 141497721 -58132429 + FLAM_C SINE Alu 1 131 -12 25 0 0 0 chr5 141497995 141498020 -58132130 + AT_rich Low_complexity Low_complexity 1 25 0 2271 105 3 10 chr5 141498478 141498782 -58131368 + AluSx SINE Alu 1 302 -10 332 283 0 30 chr5 141498913 141499012 -58131138 - MIR SINE MIR -57 205 110 1551 221 94 29 chr5 141499230 141499710 -58130440 - MLT1J LTR MaLR 0 511 1 617 200 28 28 chr5 141499813 141499958 -58130192 - Charlie8 DNA MER1_type -2272 145 1 814 173 13 0 chr5 141500733 141500883 -58129267 - MER45A DNA AcHobo 0 178 27 2205 107 0 3 chr5 141501150 141501622 -58128528 + AluSq SINE Alu 1 471 0 2358 163 14 30 chr5 141501703 141502144 -58128006 - Tigger2a DNA MER2_type 0 434 1 285 218 0 0 chr5 141502278 141502356 -58127794 + CT-rich Low_complexity Low_complexity 4 81 0 1037 166 0 12 chr5 141502725 141502888 -58127262 - FRAM SINE Alu -19 157 1 216 355 118 14 chr5 141502999 141503219 -58126931 + L2 LINE L2 1062 1304 -2010 879 254 113 28 chr5 141503512 141503839 -58126311 + MLT1H LTR MaLR 195 549 0 1997 185 26 31 chr5 141504155 141504571 -58125579 - MLT2D LTR ERVL 0 414 1 255 79 0 0 chr5 141504762 141504800 -58125350 + (TTCC)n Simple_repeat Simple_repeat 2 39 0 700 174 0 0 chr5 141504800 141504921 -58125229 - FLAM_A SINE Alu -1 141 21 1085 207 80 115 chr5 141505111 141505580 -58124570 + MLT1F1 LTR MaLR 1 462 -105 450 236 68 20 chr5 141505593 141505741 -58124409 + MLT1J LTR MaLR 155 309 -202 400 240 0 0 chr5 141505739 141505839 -58124311 + MLT1J LTR MaLR 468 567 0 * 1028 262 136 18 chr5 141506618 141507060 -58123090 + MLT1J LTR MaLR 3 496 -15 1083 132 26 5 chr5 141507448 141507637 -58122513 - MER3 DNA MER1_type -11 198 6 249 184 0 40 chr5 141507965 141508041 -58122109 + (CGGGG)n Simple_repeat Simple_repeat 2 74 0 573 74 0 12 chr5 141509440 141509521 -58120629 + MADE1 DNA Mariner 1 80 0 196 241 157 24 chr5 141510149 141510232 -58119918 + MER5A DNA MER1_type 1 94 -95 330 247 65 11 chr5 141510301 141510394 -58119756 - MER5A DNA MER1_type -83 106 9 4675 136 30 4 chr5 141510706 141511508 -58118642 - L1MA5 LINE L1 -2 6298 5476 1237 134 16 0 chr5 141511509 141511696 -58118454 - AluSg/x SINE Alu -7 303 114 510 120 0 5 chr5 141511696 141511793 -58118357 - L1P2 LINE L1 -687 5467 5374 2099 158 137 46 chr5 141512144 141512714 -58117436 - L1MB7 LINE L1 0 6184 5563 1160 92 60 16 chr5 141512745 141512929 -58117221 - L1PA10 LINE L1 -11 6157 5966 180 282 28 14 chr5 141513410 141513481 -58116669 - L2 LINE L2 -1090 2224 2153 2262 111 7 0 chr5 141513567 141513873 -58116277 - AluSg SINE Alu -2 308 1 1908 219 35 8 chr5 141514190 141514698 -58115452 - L1ME1 LINE L1 -180 5920 5399 737 180 30 123 chr5 141514699 141515092 -58115058 - MER63 DNA MER1_type 0 1061 1 5169 217 98 90 chr5 141515094 141515231 -58114919 - L1ME1 LINE L1 -743 5337 5203 2172 134 0 3 chr5 141515231 141515544 -58114606 - AluSx SINE Alu 0 312 1 2150 125 0 3 chr5 141515546 141515842 -58114308 - AluSx SINE Alu -17 295 1 5169 217 98 90 chr5 141515842 141515932 -58114218 - L1ME1 LINE L1 -877 5203 5115 2196 113 0 31 chr5 141515932 141516250 -58113900 - AluSc SINE Alu -1 308 1 5169 217 98 90 chr5 141516250 141518308 -58111842 - L1ME1 LINE L1 -965 5115 2953 812 179 0 14 chr5 141518308 141518453 -58111697 - FLAM_C SINE Alu 0 143 1 5169 217 98 90 chr5 141518453 141519616 -58110534 - L1ME1 LINE L1 -3127 2953 1801 2159 136 0 10 chr5 141520240 141520549 -58109601 + AluSx SINE Alu 1 306 -6 1908 256 46 99 chr5 141520892 141522241 -58107909 - L1ME1 LINE L1 -4371 1709 391 376 240 96 8 chr5 141522281 141522406 -58107744 - L1ME1 LINE L1 -5616 454 319 567 53 0 0 chr5 141522432 141522507 -58107643 + (CA)n Simple_repeat Simple_repeat 1 75 0 933 221 179 66 chr5 141522939 141523128 -58107022 - MLT1F1 LTR MaLR 0 567 401 2131 112 7 10 chr5 141523128 141523424 -58106726 - AluSx SINE Alu -17 295 1 933 221 179 66 chr5 141523424 141523615 -58106535 - MLT1F1 LTR MaLR -166 401 144 1161 178 55 18 chr5 141523801 141524076 -58106074 - L1M4 LINE L1 -1928 4218 3934 2353 98 3 10 chr5 141524124 141524295 -58105855 - AluSp SINE Alu -8 305 135 2203 107 0 0 chr5 141524295 141524586 -58105564 - AluSx SINE Alu -21 291 1 2353 98 3 10 chr5 141524586 141524721 -58105429 - AluSp SINE Alu -178 135 1 222 352 0 14 chr5 141524836 141524907 -58105243 - L2 LINE L2 -52 3220 3151 2365 84 0 10 chr5 141525320 141525618 -58104532 + AluSq SINE Alu 5 299 -14 2316 243 87 14 chr5 141525635 141526611 -58103539 + L1ME3A LINE L1 5123 6163 -7 2336 76 3 23 chr5 141526632 141526936 -58103214 + AluSq SINE Alu 1 298 -15 2322 105 0 0 chr5 141527044 141527340 -58102810 + AluSx SINE Alu 12 307 -5 1731 160 71 0 chr5 141527744 141527860 -58102290 + AluJb SINE Alu 1 107 -205 198 0 0 0 chr5 141527860 141527882 -58102268 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1731 160 71 0 chr5 141527882 141528047 -58102103 + AluJb SINE Alu 107 302 -10 27 29 0 0 chr5 141528939 141528973 -58101177 + AT_rich Low_complexity Low_complexity 1 34 0 1618 211 3 0 chr5 141529947 141530232 -58099918 - AluJo SINE Alu -26 286 1 193 343 110 27 chr5 141531932 141532078 -58098072 + L2 LINE L2 3133 3290 -23 24 0 0 0 chr5 141532598 141532622 -58097528 + AT_rich Low_complexity Low_complexity 1 24 0 872 246 46 33 chr5 141533392 141533721 -58096429 + L1ME3A LINE L1 5811 6143 -27 2278 119 0 0 chr5 141534327 141534630 -58095520 + AluSx SINE Alu 1 303 -9 342 0 0 0 chr5 141534657 141534695 -58095455 + (TG)n Simple_repeat Simple_repeat 2 39 0 25 0 0 0 chr5 141534822 141534847 -58095303 + AT_rich Low_complexity Low_complexity 1 25 0 354 371 56 6 chr5 141535532 141535710 -58094440 - L2 LINE L2 -522 2792 2606 478 263 30 30 chr5 141535985 141536118 -58094032 - L2 LINE L2 -1 3312 3180 232 343 84 14 chr5 141536121 141536264 -58093886 - L2 LINE L2 -974 2340 2188 1918 119 54 4 chr5 141536861 141537139 -58093011 + AluSx SINE Alu 1 292 -20 2103 124 7 10 chr5 141537370 141537669 -58092481 - AluSg SINE Alu -12 298 1 349 77 0 19 chr5 141537858 141537910 -58092240 - U6 snRNA snRNA -56 51 1 520 172 14 163 chr5 141537948 141538024 -58092126 - AluSp SINE Alu -16 297 211 2214 107 3 0 chr5 141538024 141538315 -58091835 + AluSx SINE Alu 11 302 -10 520 172 14 163 chr5 141538315 141538447 -58091703 - AluSp SINE Alu -102 211 120 239 219 0 0 chr5 141538710 141538751 -58091399 - AluJ/monomer SINE Alu -260 42 2 2367 88 0 0 chr5 141538787 141539084 -58091066 - AluY SINE Alu -14 297 1 222 37 0 0 chr5 141539099 141539126 -58091024 + (TG)n Simple_repeat Simple_repeat 2 28 0 2041 140 3 25 chr5 141539708 141540042 -58090108 - AluSx SINE Alu 0 312 1 792 197 0 0 chr5 141540111 141540243 -58089907 + FLAM_A SINE Alu 1 132 -1 1263 200 0 0 chr5 141541815 141542055 -58088095 + L1PB4 LINE L1 5910 6149 -7 676 193 0 22 chr5 141542199 141542334 -58087816 - FLAM_C SINE Alu 0 133 2 1950 134 7 7 chr5 141542721 141543019 -58087131 + AluSx SINE Alu 6 303 -9 276 154 0 0 chr5 141543027 141543079 -58087071 + G-rich Low_complexity Low_complexity 4 55 0 1874 210 28 56 chr5 141543086 141543872 -58086278 - L1MC4a LINE L1 -3 7809 7002 1976 162 7 3 chr5 141543872 141544174 -58085976 - AluJb SINE Alu -9 303 1 1874 210 28 56 chr5 141544174 141544221 -58085929 - L1MC4a LINE L1 -810 7002 6955 2073 134 0 28 chr5 141544221 141544542 -58085608 + AluSx SINE Alu 1 312 0 1874 210 28 56 chr5 141544542 141544862 -58085288 - L1MC4a LINE L1 -857 6955 6794 976 317 57 24 chr5 141545362 141545402 -58084748 + MLT1J LTR MaLR 1 38 -473 2152 101 35 0 chr5 141545402 141545690 -58084460 - AluSq SINE Alu -15 298 1 976 317 57 24 chr5 141545690 141545724 -58084426 + MLT1J LTR MaLR 38 69 -442 4096 87 9 0 chr5 141545724 141546273 -58083877 + MER41A LTR ERV1 1 554 0 976 317 57 24 chr5 141546273 141546692 -58083458 + MLT1J LTR MaLR 69 511 0 1356 183 139 0 chr5 141547105 141547379 -58082771 - AluJb SINE Alu 0 312 1 788 173 0 6 chr5 141547479 141547635 -58082515 + GA-rich Low_complexity Low_complexity 4 158 0 567 283 96 39 chr5 141547998 141548474 -58081676 - LTR33 LTR ERVL 0 521 1 1018 248 88 29 chr5 141548943 141549286 -58080864 + MLT1J LTR MaLR 1 363 -148 220 297 108 0 chr5 141550852 141550926 -58079224 + MIR SINE MIR 68 149 -113 1333 85 0 21 chr5 141550932 141551120 -58079030 + AluSq SINE Alu 128 311 -2 22 0 0 0 chr5 141551120 141551142 -58079008 + AT_rich Low_complexity Low_complexity 1 22 0 2073 120 3 3 chr5 141551151 141551443 -58078707 + AluSx SINE Alu 1 292 -20 252 0 0 0 chr5 141551454 141551482 -58078668 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 2445 80 0 0 chr5 141551495 141551806 -58078344 + AluY SINE Alu 1 311 0 2392 70 0 3 chr5 141551861 141552160 -58077990 + AluY SINE Alu 1 298 -13 276 289 141 15 chr5 141552305 141552440 -58077710 + MIR SINE MIR 98 249 -13 237 313 170 14 chr5 141552446 141552593 -58077557 - MIR3 SINE MIR -23 185 16 2262 92 14 0 chr5 141553818 141554110 -58076040 - AluSc SINE Alu -12 297 2 971 258 149 34 chr5 141554127 141554494 -58075656 + MLT1G1 LTR MaLR 73 507 -88 2197 175 50 36 chr5 141554494 141554992 -58075158 + MLT1D LTR MaLR 1 505 0 971 258 149 34 chr5 141554992 141555093 -58075057 + MLT1G1 LTR MaLR 507 595 0 201 74 0 0 chr5 141556689 141556716 -58073434 + (A)n Simple_repeat Simple_repeat 1 27 0 600 321 79 25 chr5 141556742 141557135 -58073015 - MLT1K LTR MaLR -6 582 169 4277 106 34 63 chr5 141557302 141558101 -58072049 - L1MA4A LINE L1 -4 6299 5524 239 237 0 53 chr5 141558614 141558690 -58071460 - MER117 DNA MER1_type -118 79 8 1937 115 0 31 chr5 141558800 141559086 -58071064 + AluSg1 SINE Alu 1 277 -32 231 36 0 0 chr5 141559088 141559116 -58071034 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 2185 135 3 0 chr5 141559928 141560239 -58069911 - AluSx SINE Alu 0 312 1 2065 88 0 14 chr5 141560376 141560660 -58069490 - AluSx SINE Alu -32 280 1 2083 98 14 0 chr5 141560843 141561120 -58069030 - AluY SINE Alu -8 303 23 306 229 169 8 chr5 141561121 141561239 -58068911 + L1MC4 LINE L1 7120 7256 -786 2204 199 62 19 chr5 141561343 141561855 -58068295 - MLT1F LTR MaLR -8 534 1 794 269 72 52 chr5 141561907 141562505 -58067645 + L1MC5 LINE L1 7313 7922 -39 492 198 150 96 chr5 141564092 141564159 -58065991 + MER5A DNA MER1_type 14 76 -113 2355 101 0 0 chr5 141564159 141564465 -58065685 + AluSg SINE Alu 1 306 -4 492 198 150 96 chr5 141564465 141564564 -58065586 + MER5A DNA MER1_type 76 189 0 186 346 122 0 chr5 141564760 141564867 -58065283 + L2 LINE L2 3153 3272 0 * 553 282 98 6 chr5 141564865 141565028 -58065122 + MIR SINE MIR 11 188 -74 949 237 95 53 chr5 141565142 141565501 -58064649 - MLT1A2 LTR MaLR 0 374 1 817 113 0 53 chr5 141565894 141566068 -58064082 - AluSp/q SINE Alu 0 350 184 237 108 0 0 chr5 141566176 141566213 -58063937 + (CA)n Simple_repeat Simple_repeat 2 38 0 306 0 0 0 chr5 141566644 141566678 -58063472 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1489 186 8 53 chr5 141566984 141567048 -58063102 - L1MB8 LINE L1 -1 6177 6112 1652 167 87 0 chr5 141567048 141567323 -58062827 + AluJb SINE Alu 1 299 -13 1489 186 8 53 chr5 141567323 141567634 -58062516 - L1MB8 LINE L1 -66 6112 5819 1698 176 36 12 chr5 141569045 141569380 -58060770 - MER2 DNA MER2_type 0 344 2 4011 25 0 0 chr5 141570035 141570467 -58059683 + SVA Other Other 955 1386 0 209 236 0 36 chr5 141571513 141571568 -58058582 + MIR SINE MIR 54 106 -156 2169 83 14 4 chr5 141571598 141571910 -58058240 + AluSc SINE Alu 1 315 0 1295 253 79 62 chr5 141572036 141572857 -58057293 + L2 LINE L2 2493 3313 0 210 299 0 19 chr5 141573320 141573427 -58056723 + (TA)n Simple_repeat Simple_repeat 2 106 0 257 298 44 6 chr5 141573535 141573693 -58056457 + MER103 DNA DNA 1 164 -2 2272 97 33 0 chr5 141573811 141574110 -58056040 - AluSg SINE Alu -1 309 1 25 0 0 0 chr5 141574527 141574552 -58055598 + AT_rich Low_complexity Low_complexity 1 25 0 2267 94 0 3 chr5 141574799 141575096 -58055054 - AluSg SINE Alu -14 296 1 29 28 0 0 chr5 141577467 141577503 -58052647 + AT_rich Low_complexity Low_complexity 1 36 0 24 67 0 0 chr5 141578080 141578125 -58052025 + AT_rich Low_complexity Low_complexity 1 45 0 26 0 0 0 chr5 141578731 141578757 -58051393 + AT_rich Low_complexity Low_complexity 1 26 0 2213 99 14 0 chr5 141580303 141580597 -58049553 + AluSc SINE Alu 1 298 -11 2379 67 3 7 chr5 141581504 141581802 -58048348 - AluY SINE Alu -14 297 1 337 233 78 0 chr5 141581918 141582021 -58048129 - L1ME LINE L1 -474 5647 5537 300 243 43 57 chr5 141582069 141582138 -58048012 - L1ME LINE L1 -805 5437 5369 2130 109 31 0 chr5 141582138 141582431 -58047719 - AluSc SINE Alu -7 302 1 300 243 43 57 chr5 141582431 141582501 -58047649 - L1ME LINE L1 -873 5369 5300 234 62 0 0 chr5 141583754 141583786 -58046364 + (TG)n Simple_repeat Simple_repeat 2 33 0 321 26 0 0 chr5 141583828 141583866 -58046284 + (TG)n Simple_repeat Simple_repeat 2 39 0 923 143 79 26 chr5 141583903 141583968 -58046182 - MER30 DNA MER1_type -31 199 139 2519 63 0 16 chr5 141583968 141584283 -58045867 + AluY SINE Alu 1 310 -1 923 143 79 26 chr5 141584283 141584406 -58045744 - MER30 DNA MER1_type -91 139 1 214 326 102 10 chr5 141585020 141585118 -58045032 - MIR SINE MIR -149 113 7 21 0 0 0 chr5 141585515 141585536 -58044614 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 141588796 141588834 -58041316 + AT_rich Low_complexity Low_complexity 1 38 0 2202 96 13 7 chr5 141588885 141589187 -58040963 + AluSq SINE Alu 1 304 -9 2090 127 0 0 chr5 141589246 141589553 -58040597 - AluSx SINE Alu 0 307 1 324 0 0 0 chr5 141589824 141589860 -58040290 + (CA)n Simple_repeat Simple_repeat 2 37 0 2310 121 0 0 chr5 141590775 141591082 -58039068 + AluSq SINE Alu 1 307 -6 219 306 48 0 chr5 141591297 141591359 -58038791 + L2 LINE L2 3228 3292 -21 1044 145 0 35 chr5 141591373 141591545 -58038605 + FAM SINE Alu 1 166 -9 813 152 197 30 chr5 141593404 141593673 -58036477 - MER33 DNA MER1_type -10 314 1 185 286 57 43 chr5 141594016 141594086 -58036064 - MIR3 SINE MIR -26 182 112 2486 69 0 0 chr5 141594994 141595297 -58034853 + AluSc SINE Alu 2 304 -5 317 334 53 6 chr5 141595883 141596049 -58034101 + MIR SINE MIR 1 176 -32 1478 109 0 118 chr5 141597477 141597808 -58032342 - AluSx SINE Alu -20 292 1 790 242 98 39 chr5 141597897 141597958 -58032192 - HAL1 LINE L1 -1 2506 2450 1955 151 0 25 chr5 141597958 141598277 -58031873 + AluJb SINE Alu 1 311 -1 790 242 98 39 chr5 141598277 141598624 -58031526 - HAL1 LINE L1 -57 2450 2074 * 1405 168 57 24 chr5 141598620 141598954 -58031196 - L1MC3 LINE L1 0 7785 7441 523 274 79 21 chr5 141599072 141599313 -58030837 - HAL1 LINE L1 -565 1942 1688 1336 243 149 49 chr5 141599371 141599574 -58030576 - HAL1 LINE L1 -617 1890 1709 2156 120 3 10 chr5 141599574 141599873 -58030277 - AluSx SINE Alu -15 297 1 1336 243 149 49 chr5 141599873 141600112 -58030038 - HAL1 LINE L1 -798 1709 1495 1994 146 0 13 chr5 141600112 141600413 -58029737 + AluSx SINE Alu 1 297 -15 1336 243 149 49 chr5 141600413 141601190 -58028960 - HAL1 LINE L1 -1012 1495 797 2211 87 4 0 chr5 141601190 141601466 -58028684 - AluSp SINE Alu -35 278 2 1336 243 149 49 chr5 141601466 141601892 -58028258 - HAL1 LINE L1 -1710 797 4 1883 133 75 0 chr5 141601913 141602192 -58027958 + AluSx SINE Alu 4 303 -9 287 102 0 0 chr5 141602225 141602274 -58027876 - Alu SINE Alu -3 299 251 706 200 159 10 chr5 141602607 141602802 -58027348 + MSTD LTR MaLR 173 396 0 298 292 116 9 chr5 141602808 141603024 -58027126 - L1M4 LINE L1 -2147 3999 3761 2146 119 3 19 chr5 141603865 141604176 -58025974 - AluSx SINE Alu -6 306 1 43 56 0 0 chr5 141605603 141605674 -58024476 + GC_rich Low_complexity Low_complexity 1 71 0 1854 158 7 0 chr5 141607590 141607881 -58022269 - AluJb SINE Alu -19 293 1 392 203 54 0 chr5 141607986 141608060 -58022090 - L2 LINE L2 -5 3308 3231 1745 174 25 7 chr5 141608201 141608483 -58021667 - AluJo SINE Alu -25 287 1 2103 97 3 23 chr5 141608508 141608818 -58021332 + AluSx SINE Alu 1 304 -8 202 261 370 0 chr5 141609852 141609944 -58020206 + L2 LINE L2 3145 3270 -2 208 261 31 15 chr5 141610142 141610207 -58019943 - L2 LINE L2 -558 2756 2691 1746 174 73 3 chr5 141610207 141610547 -58019603 - MLT1A1 LTR MaLR 0 365 2 2092 136 0 7 chr5 141611244 141611552 -58018598 - AluSx SINE Alu -4 308 3 469 222 155 68 chr5 141611811 141612063 -58018087 - L1MC5 LINE L1 -63 7898 7625 273 234 0 0 chr5 141612156 141612233 -58017917 - L1MC4 LINE L1 -1340 6702 6626 609 80 0 50 chr5 141612249 141612349 -58017801 - L1PA8 LINE L1 -2 6170 6076 1847 168 7 3 chr5 141612433 141612730 -58017420 - AluJb SINE Alu -14 298 1 245 113 0 183 chr5 141613103 141613174 -58016976 + L2 LINE L2 3215 3272 0 2597 42 0 7 chr5 141613203 141613513 -58016637 - AluY SINE Alu -2 309 2 648 192 0 8 chr5 141613747 141613872 -58016278 - FLAM_C SINE Alu -6 127 4 2648 61 0 0 chr5 141614314 141614625 -58015525 + AluY SINE Alu 1 311 0 334 224 60 9 chr5 141614685 141614801 -58015349 - L1MC4 LINE L1 -1841 5967 5846 2335 115 87 23 chr5 141614838 141615149 -58015001 - Tigger1 DNA MER2_type 0 2418 2070 2202 108 10 3 chr5 141615149 141615455 -58014695 - AluSg SINE Alu -2 308 1 2335 115 87 23 chr5 141615455 141615578 -58014572 - Tigger1 DNA MER2_type -348 2070 1956 756 183 0 8 chr5 141615588 141615714 -58014436 + FLAM_C SINE Alu 3 127 -16 1210 122 0 0 chr5 141615714 141615902 -58014248 - Tigger1 DNA MER2_type -458 1960 1773 807 163 27 0 chr5 141615902 141616049 -58014101 - Tigger1 DNA MER2_type -1986 432 282 3448 162 26 43 chr5 141616049 141616613 -58013537 - L1PA15 LINE L1 -1 6164 5615 2076 124 38 0 chr5 141616613 141616903 -58013247 - AluSq SINE Alu -12 301 1 3448 162 26 43 chr5 141616903 141617096 -58013054 - L1PA15 LINE L1 -550 5615 5420 2441 86 0 0 chr5 141617096 141617399 -58012751 - AluSp SINE Alu -10 303 1 421 174 12 0 chr5 141617399 141617485 -58012665 - L1PA15 LINE L1 -1154 4992 4906 2908 117 0 15 chr5 141617487 141617876 -58012274 - L1PA13 LINE L1 -1 6162 5780 2294 66 0 0 chr5 141617876 141618147 -58012003 - AluSg SINE Alu -18 292 22 2908 117 0 15 chr5 141618147 141618217 -58011933 - L1PA13 LINE L1 -383 5780 5710 1610 159 13 13 chr5 141618221 141618529 -58011621 - Tigger1 DNA MER2_type -2110 308 1 1108 256 25 25 chr5 141618555 141618914 -58011236 - L1MC4 LINE L1 -2103 5705 5347 1125 167 0 0 chr5 141618961 141619135 -58011015 - AluJb SINE Alu -138 174 1 413 234 63 18 chr5 141619295 141619406 -58010744 + FLAM_A SINE Alu 12 127 -15 1535 205 14 7 chr5 141619411 141619699 -58010451 + AluJo SINE Alu 3 292 -20 4239 135 78 7 chr5 141619709 141620436 -58009714 - MER4E LTR ERV1 0 779 1 2276 93 0 3 chr5 141620682 141620983 -58009167 - AluY SINE Alu -11 300 1 2057 129 0 0 chr5 141621145 141621425 -58008725 + AluSx SINE Alu 1 280 -32 1133 125 12 0 chr5 141621444 141621612 -58008538 - ERVL LTR ERVL -1056 4708 4539 198 349 54 8 chr5 141622119 141622248 -58007902 - L2 LINE L2 -243 3029 2895 2197 65 45 0 chr5 141622421 141622713 -58007437 + AluY SINE Alu 1 305 -6 418 267 78 57 chr5 141622717 141623056 -58007094 + L1ME LINE L1 5382 5639 -482 1461 257 78 85 chr5 141623059 141623604 -58006546 - L2 LINE L2 0 3313 2763 1557 175 3 98 chr5 141623604 141623942 -58006208 - AluJb SINE Alu -6 306 1 1461 257 78 85 chr5 141623942 141624053 -58006097 - L2 LINE L2 -550 2763 2653 452 278 28 9 chr5 141624061 141624169 -58005981 - L2 LINE L2 -16 3297 3188 1079 276 24 32 chr5 141624174 141624466 -58005684 - L2 LINE L2 -600 2714 2424 5019 89 7 11 chr5 141624466 141625160 -58004990 - LTR8 LTR ERV1 0 691 1 1079 276 24 32 chr5 141625160 141625208 -58004942 - L2 LINE L2 -890 2424 2377 319 196 22 65 chr5 141625211 141625303 -58004847 - MLT2C1 LTR ERVL -305 92 5 383 203 51 0 chr5 141625306 141625385 -58004765 - Ricksha DNA DNA -2898 348 266 2243 109 0 34 chr5 141625404 141625726 -58004424 - AluSx SINE Alu -1 311 1 15651 143 35 31 chr5 141625877 141626261 -58003889 - ERVL-C1 LTR ERVL -57 5707 5326 1952 124 4 0 chr5 141626261 141626536 -58003614 - AluSx SINE Alu -36 276 1 15651 143 35 31 chr5 141626536 141628815 -58001335 - ERVL-C1 LTR ERVL -438 5326 3034 649 241 46 11 chr5 141628815 141628989 -58001161 - MLT2D LTR ERVL -230 184 5 864 206 35 6 chr5 141631010 141631180 -57998970 - MER5B DNA MER1_type -3 175 1 210 314 102 25 chr5 141631260 141631378 -57998772 + MER5A DNA MER1_type 38 164 -25 * 380 319 78 0 chr5 141631273 141631389 -57998761 - MER5B DNA MER1_type -39 139 15 226 229 85 59 chr5 141631393 141631511 -57998639 + Tigger1 DNA MER2_type 968 1088 -1330 2383 85 0 7 chr5 141631573 141631880 -57998270 + AluSq SINE Alu 1 305 -8 263 287 75 11 chr5 141631934 141632028 -57998122 + MIR SINE MIR 32 131 -131 1987 149 71 3 chr5 141632559 141632881 -57997269 + MER2 DNA MER2_type 1 344 0 1620 179 7 26 chr5 141633052 141633360 -57996790 - AluJb SINE Alu -10 302 1 271 310 0 0 chr5 141633712 141633783 -57996367 - L2 LINE L2 0 3272 3202 2264 110 0 13 chr5 141633848 141634157 -57995993 - AluSq SINE Alu -8 305 1 374 247 10 10 chr5 141634289 141634386 -57995764 + MIR SINE MIR 117 213 -49 397 257 93 80 chr5 141634804 141635030 -57995120 + MIR SINE MIR 7 235 -27 188 252 102 79 chr5 141635591 141635718 -57994432 + MIR SINE MIR 103 232 -30 459 103 147 0 chr5 141635720 141635788 -57994362 + MADE1 DNA Mariner 3 80 0 834 147 8 8 chr5 141635879 141636008 -57994142 - AluSg/x SINE Alu -15 297 169 275 143 0 0 chr5 141636011 141636053 -57994097 + AluSq SINE Alu 133 174 -129 1400 94 0 0 chr5 141636061 141636232 -57993918 - AluSq SINE Alu -142 171 1 191 414 11 0 chr5 141636860 141636947 -57993203 - L2 LINE L2 -223 3049 2962 24 32 0 0 chr5 141637620 141637651 -57992499 + AT_rich Low_complexity Low_complexity 1 31 0 1527 134 83 35 chr5 141638785 141639075 -57991075 + AluJo SINE Alu 9 312 0 1070 191 92 48 chr5 141639075 141639368 -57990782 - MER33 DNA MER1_type -18 306 1 586 231 0 16 chr5 141639625 141639746 -57990404 + MIR SINE MIR 36 154 -108 225 0 0 0 chr5 141639761 141639786 -57990364 + (TATG)n Simple_repeat Simple_repeat 2 26 0 892 126 0 8 chr5 141639790 141639909 -57990241 - FLAM_C SINE Alu -15 118 1 243 284 159 0 chr5 141639942 141640030 -57990120 + MIR SINE MIR 156 257 -5 437 198 74 4 chr5 141641487 141641608 -57988542 + MER5A DNA MER1_type 10 183 -6 512 296 48 21 chr5 141641621 141641807 -57988343 + MIR SINE MIR 16 206 -56 273 240 10 10 chr5 141641809 141641905 -57988245 + (TA)n Simple_repeat Simple_repeat 1 96 0 1500 198 70 0 chr5 141642062 141642335 -57987815 - AluJo SINE Alu -14 298 7 1745 157 3 27 chr5 141643733 141644033 -57986117 - AluJo SINE Alu -7 305 13 2031 129 23 13 chr5 141644333 141644642 -57985508 - AluSx SINE Alu 0 312 1 1072 107 384 21 chr5 141645921 141646158 -57983992 - MER1B DNA MER1_type -55 284 1 2274 71 0 55 chr5 141646637 141646947 -57983203 + AluSg SINE Alu 1 293 -17 27 49 0 0 chr5 141647064 141647105 -57983045 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr5 141647216 141647239 -57982911 + AT_rich Low_complexity Low_complexity 1 23 0 588 348 21 12 chr5 141647265 141647601 -57982549 - HAL1 LINE L1 -871 1636 1298 * 674 269 11 31 chr5 141647595 141647814 -57982336 - L1MEd LINE L1 -4970 1149 934 2196 120 3 0 chr5 141647814 141648106 -57982044 - AluSq SINE Alu -20 293 1 674 269 11 31 chr5 141648106 141648146 -57982004 - L1MEd LINE L1 -5185 934 895 691 246 153 5 chr5 141648427 141648642 -57981508 + MIR SINE MIR 3 249 -13 1987 131 3 7 chr5 141648954 141649244 -57980906 - AluSx SINE Alu -23 289 1 430 176 177 9 chr5 141649252 141649369 -57980781 - L1MC4 LINE L1 0 8040 7882 201 259 0 0 chr5 141649391 141649449 -57980701 + (TA)n Simple_repeat Simple_repeat 1 58 0 1417 162 35 4 chr5 141649449 141649678 -57980472 + MER46A DNA MER2_type 1 236 0 281 270 0 0 chr5 141649684 141649773 -57980377 + L1MC4 LINE L1 6615 6703 -1339 * 306 227 23 0 chr5 141649693 141649781 -57980369 - L1MC4 LINE L1 -1339 6703 6614 216 97 0 0 chr5 141649782 141649813 -57980337 + (TATATG)n Simple_repeat Simple_repeat 4 34 0 239 104 104 0 chr5 141649813 141649861 -57980289 + LTR66 LTR ERVL 398 450 -160 1738 228 125 43 chr5 141649870 141650549 -57979601 - L1MC4 LINE L1 -211 7831 7097 2153 123 0 3 chr5 141650558 141650859 -57979291 - AluSx SINE Alu -12 300 1 228 213 0 0 chr5 141651401 141651448 -57978702 + L1ME LINE L1 5868 5914 -207 255 225 92 33 chr5 141652141 141652261 -57977889 - L1MC4 LINE L1 -2 8040 7914 200 122 24 0 chr5 141652285 141652326 -57977824 + (CA)n Simple_repeat Simple_repeat 2 43 0 1431 214 87 88 chr5 141652414 141652517 -57977633 - L1MC4 LINE L1 -800 7242 7140 181 56 28 28 chr5 141652517 141652553 -57977597 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1870 122 56 0 chr5 141652556 141652826 -57977324 - AluSq SINE Alu -28 285 1 1431 214 87 88 chr5 141652826 141652839 -57977311 - L1MC4 LINE L1 -904 7138 7126 207 0 0 0 chr5 141652839 141652862 -57977288 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2102 110 17 0 chr5 141652862 141653152 -57976998 - AluSx SINE Alu -17 295 1 1431 214 87 88 chr5 141653152 141653663 -57976487 - L1MC4 LINE L1 -914 7128 6610 330 293 57 52 chr5 141653700 141653846 -57976304 - L1MC4a LINE L1 -1376 6432 6283 1835 117 38 17 chr5 141653846 141654136 -57976014 + AluSx SINE Alu 1 296 -16 330 293 57 52 chr5 141654136 141654201 -57975949 - L1MC4a LINE L1 -1525 6283 6220 282 207 41 74 chr5 141654328 141654449 -57975701 - L1MC4a LINE L1 -1759 6049 5933 617 288 26 22 chr5 141654485 141654714 -57975436 - L1MC4a LINE L1 -1875 5933 5704 228 311 38 47 chr5 141654734 141654840 -57975310 - L2 LINE L2 -25 3247 3143 27 29 0 0 chr5 141655293 141655327 -57974823 + AT_rich Low_complexity Low_complexity 1 34 0 2076 138 3 0 chr5 141655980 141656276 -57973874 + AluSx SINE Alu 1 297 -15 23 0 0 0 chr5 141657419 141657442 -57972708 + AT_rich Low_complexity Low_complexity 1 23 0 297 299 72 10 chr5 141658856 141658953 -57971197 - MER5B DNA MER1_type -75 103 1 1804 172 13 10 chr5 141659519 141659822 -57970328 - AluJo SINE Alu -8 304 1 187 242 22 88 chr5 141659904 141659995 -57970155 - L3 LINE CR1 -135 1442 1358 368 149 45 0 chr5 141660061 141660128 -57970022 - L1MA9 LINE L1 0 6312 6243 1275 143 23 19 chr5 141660131 141660347 -57969803 - AluJo SINE Alu -10 302 86 632 134 0 42 chr5 141660347 141660466 -57969684 - L1MA9 LINE L1 -64 6248 6135 1803 177 0 10 chr5 141660599 141660910 -57969240 + AluJb SINE Alu 1 308 -4 2325 118 0 0 chr5 141661033 141661337 -57968813 + AluSq SINE Alu 1 304 -9 2445 152 24 79 chr5 141662399 141662891 -57967259 - LTR32 LTR ERVL 0 471 7 217 314 67 88 chr5 141662975 141663214 -57966936 + L2 LINE L2 2851 3084 -188 1849 153 0 14 chr5 141663218 141663513 -57966637 - AluJb SINE Alu -9 303 13 2383 94 0 0 chr5 141664289 141664597 -57965553 - AluSp SINE Alu -5 308 1 31 0 0 0 chr5 141664635 141664666 -57965484 + AT_rich Low_complexity Low_complexity 1 31 0 1094 144 116 0 chr5 141665596 141665769 -57964381 + MER46A DNA MER2_type 44 236 0 374 339 8 0 chr5 141666223 141666353 -57963797 + MER94 DNA DNA 1 131 -3 555 232 56 60 chr5 141666563 141666626 -57963524 - MIR SINE MIR -55 207 145 2122 112 7 3 chr5 141666626 141666922 -57963228 - AluSq SINE Alu -16 297 1 555 232 56 60 chr5 141666922 141667062 -57963088 - MIR SINE MIR -117 145 4 786 228 204 22 chr5 141667088 141667504 -57962646 - MER113 DNA MER1_type? -28 493 2 24 0 0 0 chr5 141668002 141668026 -57962124 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 141668672 141668694 -57961456 + AT_rich Low_complexity Low_complexity 1 22 0 425 285 26 13 chr5 141668845 141668996 -57961154 + L1MC4a LINE L1 5783 5935 -1873 597 287 106 0 chr5 141669414 141669602 -57960548 - MIR SINE MIR -24 238 31 299 286 92 0 chr5 141669864 141669962 -57960188 + L2 LINE L2 3204 3310 -3 19600 23 1 6 chr5 141670582 141672849 -57957301 - L1PA3 LINE L1 -1 6154 3901 10446 53 22 48 chr5 141672849 141674266 -57955884 - SVA Other Other -2 1384 5 19600 23 1 6 chr5 141674266 141674966 -57955184 - L1PA3 LINE L1 -2254 3901 3199 778 180 0 14 chr5 141675115 141675254 -57954896 - MER46A DNA MER2_type 0 236 100 455 319 77 54 chr5 141675266 141675458 -57954692 + L2 LINE L2 2507 2693 -621 1786 159 7 17 chr5 141675458 141675753 -57954397 + AluJo SINE Alu 1 292 -20 455 319 77 54 chr5 141675753 141675949 -57954201 + L2 LINE L2 2693 2904 -410 251 342 107 18 chr5 141675998 141676223 -57953927 + L2 LINE L2 3027 3271 -1 2320 84 34 0 chr5 141677102 141677399 -57952751 + AluSc SINE Alu 1 307 -2 204 307 23 68 chr5 141677445 141677533 -57952617 - L3 LINE CR1 -415 1162 1079 2468 56 0 0 chr5 141677914 141678200 -57951950 + AluY SINE Alu 1 286 -25 213 39 0 0 chr5 141678204 141678230 -57951920 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 482 154 0 0 chr5 141678242 141678320 -57951830 + AluS SINE Alu 1 78 -234 191 309 36 0 chr5 141678707 141678762 -57951388 + L2 LINE L2 3239 3295 -18 253 297 8 68 chr5 141678766 141678884 -57951266 - MIR3 SINE MIR -13 195 85 21 57 0 0 chr5 141679765 141679800 -57950350 + AT_rich Low_complexity Low_complexity 1 35 0 247 295 58 64 chr5 141680725 141680881 -57949269 - MIR3 SINE MIR -35 173 19 811 188 0 0 chr5 141681008 141681141 -57949009 - FLAM_C SINE Alu 0 133 1 2360 99 0 0 chr5 141682364 141682666 -57947484 - AluSx SINE Alu -9 303 2 590 270 24 76 chr5 141682760 141683049 -57947101 + L2 LINE L2 3026 3299 -14 1741 169 0 40 chr5 141683162 141683487 -57946663 + AluJo SINE Alu 1 312 0 2710 167 34 47 chr5 141684186 141684742 -57945408 - MER44D DNA MER2_type 0 605 2 615 279 52 26 chr5 141684754 141684987 -57945163 - MIR SINE MIR -4 258 20 211 221 8 49 chr5 141685062 141685184 -57944966 + C-rich Low_complexity Low_complexity 1 117 0 255 211 7 61 chr5 141685308 141685455 -57944695 + G-rich Low_complexity Low_complexity 4 142 0 615 279 52 26 chr5 141685530 141685763 -57944387 + MIR SINE MIR 20 258 -4 2684 169 34 47 chr5 141685775 141686331 -57943819 + MER44D DNA MER2_type 2 605 0 1276 158 7 104 chr5 141686828 141687106 -57943044 - AluJo SINE Alu -61 251 1 880 287 98 54 chr5 141687383 141687519 -57942631 - L2 LINE L2 -31 3282 3153 308 94 19 0 chr5 141687519 141687572 -57942578 + (TG)n Simple_repeat Simple_repeat 1 54 0 880 287 98 54 chr5 141687572 141687863 -57942287 - L2 LINE L2 -160 3153 2836 306 223 165 0 chr5 141687880 141687983 -57942167 - L2 LINE L2 -610 2704 2585 * 737 304 114 36 chr5 141687976 141688361 -57941789 + L3 LINE CR1 657 1071 -506 825 280 7 69 chr5 141688586 141688861 -57941289 - MIR SINE MIR -3 259 2 426 341 55 12 chr5 141689042 141689206 -57940944 + L3 LINE CR1 1069 1239 -338 645 267 168 21 chr5 141689260 141689545 -57940605 + L2 LINE L2 2159 2485 -829 215 146 24 0 chr5 141689604 141689645 -57940505 + L2 LINE L2 2489 2530 -784 192 259 0 62 chr5 141689751 141689832 -57940318 + L2 LINE L2 2941 3016 -297 1271 250 143 16 chr5 141689846 141690330 -57939820 + MLT1E2 LTR MaLR 13 557 -69 400 286 153 39 chr5 141690464 141690719 -57939431 + L2 LINE L2 3008 3291 -22 230 314 49 0 chr5 141691544 141691646 -57938504 - HAL1 LINE L1 -857 1650 1544 296 314 94 33 chr5 141691841 141692086 -57938064 - HAL1b LINE L1 -696 652 393 877 161 129 16 chr5 141692455 141692641 -57937509 + MER6B DNA MER2_type 3 209 -1 204 158 0 0 chr5 141693199 141693237 -57936913 + (TA)n Simple_repeat Simple_repeat 2 39 0 192 152 0 0 chr5 141693420 141693453 -57936697 + T-rich Low_complexity Low_complexity 1 33 0 660 186 70 0 chr5 141693956 141694085 -57936065 + FLAM_A SINE Alu 1 138 -4 2128 89 38 3 chr5 141694187 141694479 -57935671 + AluY SINE Alu 1 302 -9 1248 245 88 0 chr5 141694612 141694975 -57935175 - L1MEc LINE L1 -5603 793 399 724 207 65 55 chr5 141695011 141695286 -57934864 - L1MEc LINE L1 -6075 321 44 1494 115 5 5 chr5 141695437 141695646 -57934504 - AluSx SINE Alu -72 240 32 396 135 42 94 chr5 141695651 141695747 -57934403 + L2 LINE L2 3222 3312 -1 2194 122 0 0 chr5 141695958 141696252 -57933898 - AluSg SINE Alu -16 294 1 22 56 0 0 chr5 141697089 141697125 -57933025 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 141698045 141698069 -57932081 + AT_rich Low_complexity Low_complexity 1 24 0 420 257 114 0 chr5 141700970 141701075 -57929075 + MER5A DNA MER1_type 67 183 -6 292 262 95 48 chr5 141700971 141701097 -57929053 - MER5A DNA MER1_type -56 133 2 * 2241 112 3 13 chr5 141701249 141701562 -57928588 - AluSq SINE Alu -1 312 3 363 107 0 0 chr5 141701784 141701840 -57928310 - MLT1D LTR MaLR 0 505 450 2107 129 0 3 chr5 141701857 141702143 -57928007 - AluSx SINE Alu -27 285 1 446 163 179 65 chr5 141702166 141702350 -57927800 - MLT1D LTR MaLR -139 366 162 931 175 6 6 chr5 141702412 141702583 -57927567 - MLT1D LTR MaLR -333 172 2 255 277 40 79 chr5 141702914 141703015 -57927135 + L2 LINE L2 3169 3265 -7 319 270 91 52 chr5 141704435 141704665 -57925485 + L2 LINE L2 1604 1842 -1472 689 211 141 17 chr5 141704788 141705098 -57925052 - MLT1E3 LTR MaLR -170 454 39 341 271 215 6 chr5 141705104 141705281 -57924869 + L2 LINE L2 2131 2344 -970 249 263 56 56 chr5 141705390 141705550 -57924600 - MLT1J LTR MaLR -106 405 246 596 248 136 5 chr5 141705781 141705987 -57924163 - MLT1J LTR MaLR -11 500 268 2271 176 107 7 chr5 141706219 141706678 -57923472 - MLT1D LTR MaLR 0 505 1 184 309 18 0 chr5 141709733 141709788 -57920362 - L3b LINE CR1 -4 1579 1524 382 378 7 0 chr5 141709959 141710094 -57920056 - MIR3 SINE MIR -59 149 14 280 257 94 64 chr5 141711763 141711965 -57918185 - MLT1L LTR MaLR -223 392 185 2636 58 0 0 chr5 141712256 141712567 -57917583 + AluY SINE Alu 1 311 0 34 0 0 0 chr5 141712625 141712659 -57917491 + AT_rich Low_complexity Low_complexity 1 34 0 1416 153 141 0 chr5 141713193 141713506 -57916644 + MER46B DNA MER2_type 1 232 -4 227 306 116 24 chr5 141713861 141714233 -57915917 + HAL1 LINE L1 847 1252 -1255 348 127 0 0 chr5 141714321 141714376 -57915774 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2205 140 0 0 chr5 141714379 141714687 -57915463 - AluSx SINE Alu -4 308 1 23 54 0 0 chr5 141715487 141715524 -57914626 + AT_rich Low_complexity Low_complexity 1 37 0 380 56 0 0 chr5 141715562 141715616 -57914534 - L1MA3 LINE L1 0 6305 6252 3894 232 65 38 chr5 141715924 141717438 -57912712 - L1MDa LINE L1 -4643 1897 193 240 186 0 0 chr5 141717457 141717500 -57912650 - MSTD LTR MaLR 0 396 354 276 30 0 0 chr5 141717658 141717691 -57912459 + (CA)n Simple_repeat Simple_repeat 2 34 0 6496 221 20 41 chr5 141717694 141719537 -57910613 - L1M3 LINE L1 -401 5782 3902 2379 91 0 7 chr5 141719537 141719833 -57910317 - AluSq SINE Alu -19 294 1 6496 221 20 41 chr5 141719833 141720005 -57910145 - L1M3 LINE L1 -2281 3902 3728 971 135 0 0 chr5 141720005 141720138 -57910012 - FLAM_C SINE Alu -10 133 1 6496 221 20 41 chr5 141720138 141720494 -57909656 - L1M3 LINE L1 -2455 3728 3424 354 205 60 0 chr5 141720557 141720640 -57909510 - L1M3 LINE L1 -2960 3186 3099 32 43 0 0 chr5 141720647 141720693 -57909457 + AT_rich Low_complexity Low_complexity 1 46 0 764 165 0 0 chr5 141720699 141720814 -57909336 - FLAM_C SINE Alu -18 115 1 855 128 20 7 chr5 141721015 141721163 -57908987 - LTR9 LTR ERV1 0 612 463 2142 123 0 0 chr5 141724231 141724516 -57905634 + AluSx SINE Alu 1 285 -27 180 0 0 0 chr5 141724516 141724536 -57905614 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2347 79 6 19 chr5 141725240 141725555 -57904595 + AluSq SINE Alu 1 311 -2 824 204 37 16 chr5 141725555 141725746 -57904404 + MER20 DNA MER1_type 1 195 -24 23 33 0 0 chr5 141725784 141725814 -57904336 + AT_rich Low_complexity Low_complexity 1 30 0 368 232 99 47 chr5 141725916 141726149 -57904001 - L1MC5 LINE L1 -36 7925 7681 259 228 38 0 chr5 141726154 141726233 -57903917 - L1MC/D LINE L1 -2000 5808 5727 648 58 0 0 chr5 141727550 141727637 -57902513 - L1PA6 LINE L1 -2 6152 6066 916 241 28 5 chr5 141727637 141727853 -57902297 - MER58A DNA MER1_type -2 222 2 403 318 60 16 chr5 141727901 141728141 -57902009 + MIR SINE MIR 14 262 0 197 306 16 0 chr5 141728427 141728489 -57901661 - L2 LINE L2 0 3272 3210 345 277 101 16 chr5 141728765 141729114 -57901036 + Charlie7 DNA MER1_type 22 434 -2178 1435 236 102 37 chr5 141729196 141729389 -57900761 + Charlie7 DNA MER1_type 1727 1906 -706 1807 109 35 8 chr5 141729389 141729646 -57900504 + AluSx SINE Alu 39 302 -10 1435 236 102 37 chr5 141729646 141730214 -57899936 + Charlie7 DNA MER1_type 1906 2538 -74 26 82 0 0 chr5 141730395 141730456 -57899694 + AT_rich Low_complexity Low_complexity 1 61 0 2337 76 0 0 chr5 141731758 141732047 -57898103 - AluY SINE Alu -22 289 1 1945 162 60 25 chr5 141732202 141732734 -57897416 - MLT2A2 LTR ERVL -7 547 1 25631 88 25 2 chr5 141732734 141736349 -57893801 - HERVL-A2 LTR ERVL 0 5654 1959 367 323 112 23 chr5 141736789 141737205 -57892945 + L1MC/D LINE L1 5137 5592 -816 23 54 0 0 chr5 141741470 141741507 -57888643 + AT_rich Low_complexity Low_complexity 1 37 0 457 247 0 25 chr5 141742695 141742857 -57887293 - L1MB8 LINE L1 -2 6176 6019 1015 111 0 0 chr5 141742932 141743098 -57887052 - AluSg/x SINE Alu 0 310 153 22 35 0 0 chr5 141744077 141744106 -57886044 + AT_rich Low_complexity Low_complexity 1 29 0 1132 183 0 19 chr5 141744882 141745095 -57885055 - AluJo SINE Alu -16 296 88 368 261 52 9 chr5 141746722 141746837 -57883313 + MIR SINE MIR 95 214 -48 284 369 59 30 chr5 141746881 141747117 -57883033 - L3 LINE CR1 -33 1544 1302 243 169 46 31 chr5 141747143 141747208 -57882942 - L2 LINE L2 -60 3212 3147 1310 284 114 96 chr5 141747364 141748511 -57881639 - L2 LINE L2 -876 2438 1257 876 167 59 43 chr5 141748511 141748697 -57881453 + MER5A DNA MER1_type 1 189 0 1310 284 114 96 chr5 141748697 141749022 -57881128 - L2 LINE L2 -2057 1257 939 22 0 0 0 chr5 141749627 141749649 -57880501 + AT_rich Low_complexity Low_complexity 1 22 0 210 91 0 0 chr5 141752159 141752192 -57877958 + (TATG)n Simple_repeat Simple_repeat 2 34 0 1939 147 18 0 chr5 141752194 141752473 -57877677 - AluSx SINE Alu -28 284 1 2054 133 0 13 chr5 141752721 141753037 -57877113 - AluSx SINE Alu 0 312 1 207 0 0 0 chr5 141753040 141753063 -57877087 + (TTG)n Simple_repeat Simple_repeat 2 24 0 22 56 0 0 chr5 141753219 141753255 -57876895 + AT_rich Low_complexity Low_complexity 1 36 0 210 220 17 51 chr5 141753307 141753366 -57876784 + L2 LINE L2 3216 3272 0 287 218 64 0 chr5 141753427 141753505 -57876645 + L1MEd LINE L1 918 1000 -5119 350 347 110 83 chr5 141753711 141754120 -57876030 + L2 LINE L2 2853 3272 0 2346 76 0 7 chr5 141754574 141754876 -57875274 - AluY SINE Alu -11 300 1 264 59 0 0 chr5 141755316 141755350 -57874800 + (TG)n Simple_repeat Simple_repeat 2 35 0 200 217 0 0 chr5 141759429 141759475 -57870675 + T-rich Low_complexity Low_complexity 1 46 0 239 231 0 0 chr5 141759507 141759559 -57870591 + (TGGA)n Simple_repeat Simple_repeat 4 55 0 192 265 41 0 chr5 141759712 141759761 -57870389 + L2 LINE L2 3221 3271 -1 198 0 0 0 chr5 141760326 141760348 -57869802 + (AGGGGG)n Simple_repeat Simple_repeat 6 27 0 207 0 0 0 chr5 141760731 141760754 -57869396 + (CA)n Simple_repeat Simple_repeat 2 24 0 420 330 34 0 chr5 141760858 141760976 -57869174 + L2 LINE L2 3150 3271 -1 425 318 31 20 chr5 141761645 141761840 -57868310 - MIR3 SINE MIR -11 197 1 2321 34 0 0 chr5 141763652 141763915 -57866235 + AluY SINE Alu 27 289 -22 321 340 27 27 chr5 141764114 141764261 -57865889 - MIR SINE MIR -46 216 70 467 269 272 6 chr5 141765581 141765905 -57864245 + L2 LINE L2 1874 2283 -1031 373 265 109 43 chr5 141766567 141766778 -57863372 + L2 LINE L2 2929 3153 -160 594 257 13 47 chr5 141767222 141767414 -57862736 - MIR SINE MIR -31 231 44 875 302 139 18 chr5 141767435 141768048 -57862102 + L2 LINE L2 2275 2961 -353 261 83 0 0 chr5 141768918 141768954 -57861196 + (T)n Simple_repeat Simple_repeat 1 36 0 207 255 0 0 chr5 141770540 141770591 -57859559 + (CA)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr5 141770615 141770637 -57859513 + AT_rich Low_complexity Low_complexity 1 22 0 2297 92 3 3 chr5 141771568 141771862 -57858288 - AluSg1 SINE Alu -15 294 1 32 43 0 0 chr5 141771891 141771937 -57858213 + AT_rich Low_complexity Low_complexity 1 46 0 322 277 103 5 chr5 141772063 141772258 -57857892 - L1MC4a LINE L1 -1854 5954 5741 273 333 81 0 chr5 141772278 141772389 -57857761 + MER91C DNA MER1_type 1 120 -20 220 211 0 19 chr5 141772441 141772493 -57857657 + GA-rich Low_complexity Low_complexity 5 55 0 458 224 0 0 chr5 141772821 141772906 -57857244 + MER117 DNA MER1_type 3 87 -110 1891 178 87 14 chr5 141772907 141773149 -57857001 + L1MB3 LINE L1 5451 5674 -509 2588 102 3 21 chr5 141773149 141773531 -57856619 + THE1C LTR MaLR 1 375 0 1891 178 87 14 chr5 141773531 141773960 -57856190 + L1MB3 LINE L1 5674 6183 0 190 175 25 25 chr5 141774101 141774141 -57856009 - MER5A DNA MER1_type 0 189 150 244 321 112 22 chr5 141775073 141775207 -57854943 - MIR SINE MIR -13 249 104 406 279 83 29 chr5 141775211 141775415 -57854735 - MIR SINE MIR 0 262 48 1665 153 0 52 chr5 141775453 141775740 -57854410 - AluJb SINE Alu -23 289 18 876 300 139 16 chr5 141775877 141776448 -57853702 + L2 LINE L2 2618 3254 -59 760 174 168 6 chr5 141776807 141776968 -57853182 + MER5A DNA MER1_type 1 187 -2 486 294 109 47 chr5 141777381 141777721 -57852429 - L2 LINE L2 -90 3223 2863 664 238 117 39 chr5 141777787 141778094 -57852056 - L2 LINE L2 -597 2717 2387 2353 144 28 17 chr5 141778846 141779206 -57850944 + THE1B LTR MaLR 1 364 0 309 288 89 78 chr5 141779206 141779397 -57850753 - L2 LINE L2 -3 3269 3077 2377 81 0 0 chr5 141779965 141780260 -57849890 - AluSg SINE Alu -15 295 1 416 239 115 0 chr5 141781749 141781879 -57848271 - L1ME4a LINE L1 -295 5826 5682 556 271 59 20 chr5 141781900 141782103 -57848047 - MLT1K LTR MaLR -4 584 374 641 298 123 49 chr5 141782869 141783486 -57846664 + L2 LINE L2 2641 3304 -9 2014 160 13 0 chr5 141783747 141784059 -57846091 - 7SLRNA srpRNA srpRNA -4 316 1 1698 142 71 8 chr5 141784109 141784377 -57845773 - AluJo SINE Alu -27 285 1 275 0 29 0 chr5 141785078 141785113 -57845037 + (CA)n Simple_repeat Simple_repeat 2 37 0 180 0 0 0 chr5 141785384 141785404 -57844746 + (TTGG)n Simple_repeat Simple_repeat 2 21 0 2135 148 87 0 chr5 141786416 141786773 -57843377 - L1MB2 LINE L1 -2 6169 5782 555 250 24 0 chr5 141787197 141787321 -57842829 + L2 LINE L2 1768 1894 -1420 1800 257 88 42 chr5 141787321 141788145 -57842005 + L2 LINE L2 2168 3060 -253 2454 210 155 17 chr5 141788145 141788727 -57841423 - MLT2F LTR ERVL 0 663 2 1800 257 88 42 chr5 141788727 141788994 -57841156 + L2 LINE L2 3060 3313 0 863 156 0 26 chr5 141789367 141789521 -57840629 - AluJb SINE Alu 0 312 163 2209 123 0 0 chr5 141790002 141790312 -57839838 - AluSg SINE Alu 0 310 1 28 0 0 0 chr5 141790812 141790840 -57839310 + AT_rich Low_complexity Low_complexity 1 28 0 195 200 0 0 chr5 141791114 141791149 -57839001 + MIR SINE MIR 218 252 -10 1066 260 109 46 chr5 141791494 141791933 -57838217 - MLT1L LTR MaLR 0 615 149 210 37 0 0 chr5 141892102 141892129 -57738021 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 677 180 23 106 chr5 141893399 141893616 -57736534 - MER20 DNA MER1_type 0 219 21 923 273 55 32 chr5 141893800 141894148 -57736002 + LTR16B LTR ERVL 87 442 -22 216 0 0 0 chr5 141894821 141894845 -57735305 + (T)n Simple_repeat Simple_repeat 1 24 0 640 303 123 41 chr5 141894894 141895260 -57734890 - L2 LINE L2 -8 3264 2869 1358 173 50 23 chr5 141895324 141895584 -57734566 + AluJb SINE Alu 21 287 -25 378 0 0 0 chr5 141896031 141896073 -57734077 + (TG)n Simple_repeat Simple_repeat 2 43 0 532 312 110 31 chr5 141896510 141896552 -57733598 + L2 LINE L2 2689 2726 -587 180 111 0 0 chr5 141896552 141896579 -57733571 + (CAAAA)n Simple_repeat Simple_repeat 1 27 0 532 312 110 31 chr5 141896579 141897063 -57733087 + L2 LINE L2 2726 3270 -43 562 352 119 39 chr5 141897098 141897387 -57732763 - L2 LINE L2 -2014 1300 1035 2186 117 0 22 chr5 141897387 141897704 -57732446 + AluSx SINE Alu 3 312 0 562 352 119 39 chr5 141897704 141898408 -57731742 - L2 LINE L2 -2279 1035 228 636 246 107 40 chr5 141899849 141900223 -57729927 + MLT1H LTR MaLR 148 546 -3 348 24 0 0 chr5 141900613 141900654 -57729496 + (GA)n Simple_repeat Simple_repeat 1 41 0 315 0 0 0 chr5 141900653 141900688 -57729462 + (TG)n Simple_repeat Simple_repeat 1 35 0 * 1747 160 3 20 chr5 141901584 141901878 -57728272 - AluJb SINE Alu -23 289 1 406 336 93 50 chr5 141902117 141902557 -57727593 + L2 LINE L2 2837 3295 -18 204 40 0 0 chr5 141902562 141902587 -57727563 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 411 267 205 25 chr5 141906198 141906359 -57723791 + MIR SINE MIR 19 208 -54 205 333 131 0 chr5 141906716 141906815 -57723335 + L2 LINE L2 3197 3308 -5 371 245 182 50 chr5 141907649 141907808 -57722342 - MER5A DNA MER1_type -9 180 1 1668 104 0 0 chr5 141909113 141909346 -57720804 - AluSg/x SINE Alu 0 301 69 270 309 163 0 chr5 141909501 141909624 -57720526 + MIR SINE MIR 119 261 -1 329 302 33 55 chr5 141910438 141910620 -57719530 - L2 LINE L2 -1838 1476 1299 268 181 42 14 chr5 141910812 141910884 -57719266 + MER116 DNA Mariner 7 80 0 237 313 62 0 chr5 141911646 141911742 -57718408 + L2 LINE L2 959 1060 -2254 330 227 221 57 chr5 141912617 141912948 -57717202 + MLT1J1 LTR MaLR 1 385 -61 193 252 19 97 chr5 141913609 141913712 -57716438 - MIR SINE MIR -50 212 118 467 265 15 0 chr5 141914284 141914416 -57715734 + MER94 DNA DNA 1 134 0 229 385 0 0 chr5 141914618 141914683 -57715467 + L2 LINE L2 3208 3272 0 345 62 0 0 chr5 141917188 141917236 -57712914 + (TG)n Simple_repeat Simple_repeat 2 49 0 1972 170 36 22 chr5 141917775 141918134 -57712016 + THE1B LTR MaLR 1 364 0 341 86 17 0 chr5 141918904 141918962 -57711188 + (TG)n Simple_repeat Simple_repeat 1 59 0 26 30 0 0 chr5 141918973 141919006 -57711144 + AT_rich Low_complexity Low_complexity 1 33 0 962 202 0 17 chr5 141919299 141919477 -57710673 + FAM SINE Alu 1 175 0 15234 117 23 19 chr5 141919749 141921920 -57708230 - Tigger1 DNA MER2_type 0 2418 237 2338 110 0 0 chr5 141921920 141922220 -57707930 + AluSx SINE Alu 1 300 -12 15234 117 23 19 chr5 141922220 141922458 -57707692 - Tigger1 DNA MER2_type -2181 237 1 21 36 0 0 chr5 141922471 141922499 -57707651 + AT_rich Low_complexity Low_complexity 1 28 0 2158 183 54 21 chr5 141923182 141923663 -57706487 - MLT1D LTR MaLR -8 497 1 29 0 0 0 chr5 141923677 141923706 -57706444 + AT_rich Low_complexity Low_complexity 1 29 0 498 26 26 26 chr5 141923906 141923983 -57706167 + (TTTC)n Simple_repeat Simple_repeat 4 80 0 591 142 219 7 chr5 141924105 141924260 -57705890 - L1MA8 LINE L1 -1 6290 6103 1137 134 0 0 chr5 141924261 141924418 -57705732 - AluSg/x SINE Alu -14 298 142 1345 114 16 39 chr5 141924421 141924676 -57705474 - L1MA8 LINE L1 -181 6110 5862 362 213 16 25 chr5 141925005 141925127 -57705023 - L1M4 LINE L1 -3111 3035 2915 231 108 0 0 chr5 141925133 141925170 -57704980 - L1MB1 LINE L1 -6 6162 6126 232 151 0 38 chr5 141925170 141925223 -57704927 + T-rich Low_complexity Low_complexity 3 53 0 3406 141 33 30 chr5 141925223 141926100 -57704050 - L1MB1 LINE L1 -27 6141 5100 31 0 0 0 chr5 141926724 141926755 -57703395 + AT_rich Low_complexity Low_complexity 1 31 0 310 349 71 49 chr5 141926780 141927233 -57702917 + L2 LINE L2 1535 1997 -1317 1911 141 13 13 chr5 141927294 141927593 -57702557 - AluSx SINE Alu -13 299 1 236 356 20 48 chr5 141928309 141928455 -57701695 + L2 LINE L2 2665 2806 -508 294 106 0 0 chr5 141928523 141928570 -57701580 + (TG)n Simple_repeat Simple_repeat 2 48 0 22 35 0 0 chr5 141929204 141929233 -57700917 + AT_rich Low_complexity Low_complexity 1 29 0 357 43 0 0 chr5 141929247 141929294 -57700856 + (TG)n Simple_repeat Simple_repeat 1 47 0 279 0 0 0 chr5 141930776 141930807 -57699343 + (TA)n Simple_repeat Simple_repeat 2 32 0 2045 110 12 61 chr5 141930807 141931130 -57699020 - AluSx SINE Alu -5 307 1 256 303 111 10 chr5 141931855 141931954 -57698196 - L2 LINE L2 -35 3237 3129 649 316 34 46 chr5 141932382 141932433 -57697717 - MIR SINE MIR -8 254 204 4162 82 4 0 chr5 141932433 141932983 -57697167 - MER41A LTR ERV1 0 554 3 649 316 34 46 chr5 141932983 141933168 -57696982 - MIR SINE MIR -58 204 21 342 212 37 134 chr5 141935628 141935877 -57694273 - Charlie8 DNA MER1_type 0 2417 127 22 35 0 0 chr5 141936038 141936067 -57694083 + AT_rich Low_complexity Low_complexity 1 29 0 2113 110 7 10 chr5 141936841 141937141 -57693009 - AluSq SINE Alu -14 299 1 226 298 0 0 chr5 141938814 141938871 -57691279 - L2 LINE L2 0 3313 3257 201 322 172 0 chr5 141938902 141938989 -57691161 - MIR SINE MIR -133 129 28 461 319 25 0 chr5 141939660 141939817 -57690333 - MIR3 SINE MIR -16 192 32 3620 152 8 53 chr5 141940206 141940981 -57689169 + L1MB3 LINE L1 5444 6183 0 1429 188 86 8 chr5 141942010 141942371 -57687779 + MER110A LTR ERV1 1 389 -79 2128 156 43 51 chr5 141942381 141942848 -57687302 + L1MB5 LINE L1 5711 6173 -1 1564 161 7 22 chr5 141942861 141943134 -57687016 + AluJo SINE Alu 21 289 -23 226 247 91 0 chr5 141943148 141943225 -57686925 + MER110 LTR ERV1 387 470 -21 330 26 0 0 chr5 141946008 141946047 -57684103 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr5 141946235 141946263 -57683887 + AT_rich Low_complexity Low_complexity 1 28 0 720 223 71 104 chr5 141946342 141946742 -57683408 + MLT1J1 LTR MaLR 1 425 -21 1757 184 10 16 chr5 141946742 141947047 -57683103 - AluJb SINE Alu -9 303 1 720 223 71 104 chr5 141947047 141947069 -57683081 + MLT1J1 LTR MaLR 425 446 0 24 67 0 0 chr5 141947217 141947262 -57682888 + AT_rich Low_complexity Low_complexity 1 45 0 1236 231 31 3 chr5 141947890 141948184 -57681966 - LTR40c LTR ERVL -108 357 56 330 115 0 0 chr5 141950628 141950680 -57679470 + (TAA)n Simple_repeat Simple_repeat 3 54 0 330 258 11 0 chr5 141950680 141950769 -57679381 - MIR SINE MIR -7 255 166 1914 192 101 7 chr5 141950915 141951343 -57678807 + MLT1D LTR MaLR 1 468 -37 983 230 118 67 chr5 141951545 141951936 -57678214 - MER77 LTR ERV1 -6 599 189 1696 189 3 7 chr5 141952821 141953122 -57677028 + AluJb SINE Alu 1 300 -12 32 0 0 0 chr5 141953188 141953220 -57676930 + AT_rich Low_complexity Low_complexity 1 32 0 2294 119 3 3 chr5 141953261 141953572 -57676578 + AluSx SINE Alu 1 311 -1 201 94 0 0 chr5 141953631 141953663 -57676487 + (CA)n Simple_repeat Simple_repeat 1 32 0 303 258 48 8 chr5 141953686 141953810 -57676340 + L1ME4a LINE L1 5977 6105 -16 218 284 90 0 chr5 141954823 141954890 -57675260 - L2 LINE L2 0 3272 3200 494 306 80 106 chr5 141955090 141955541 -57674609 - L2 LINE L2 -224 3048 2586 1634 158 141 23 chr5 141955541 141955895 -57674255 + MSTD LTR MaLR 1 396 0 494 306 80 106 chr5 141955895 141956180 -57673970 - L2 LINE L2 -686 2586 2331 1590 281 26 48 chr5 141956180 141956788 -57673362 + MLT1G1 LTR MaLR 1 595 0 494 306 80 106 chr5 141956788 141956968 -57673182 - L2 LINE L2 -941 2331 2148 367 302 128 24 chr5 141957602 141957836 -57672314 + MIR SINE MIR 8 261 -1 1686 166 0 66 chr5 141958310 141958706 -57671444 + L1MA7 LINE L1 5769 6131 -160 552 282 12 18 chr5 141958730 141958893 -57671257 + MIR SINE MIR 41 202 -60 544 234 103 34 chr5 141958909 141959084 -57671066 - MIR SINE MIR -26 236 50 182 255 21 21 chr5 141959239 141959286 -57670864 - MIR SINE MIR -141 67 21 40284 33 23 8 chr5 141960077 141966134 -57664016 + L1PA3 LINE L1 1 6152 -3 26 0 0 0 chr5 141966134 141966160 -57663990 + AT_rich Low_complexity Low_complexity 1 26 0 2226 112 0 3 chr5 141966186 141966490 -57663660 - AluSq SINE Alu -10 303 1 294 254 0 0 chr5 141966710 141966781 -57663369 + MIR SINE MIR 178 248 -14 513 283 87 36 chr5 141967331 141967550 -57662600 + MIR SINE MIR 15 244 -18 * 1168 271 74 55 chr5 141967549 141968070 -57662080 - L2 LINE L2 0 3313 2782 535 180 36 9 chr5 141968758 141968869 -57661281 + MLT1F1 LTR MaLR 454 567 0 192 274 123 14 chr5 141969166 141969239 -57660911 - L2 LINE L2 -38 3234 3154 396 350 92 12 chr5 141969999 141970162 -57659988 + L2 LINE L2 3097 3272 0 186 133 0 0 chr5 141970551 141970581 -57659569 + (A)n Simple_repeat Simple_repeat 1 30 0 206 315 81 41 chr5 141971074 141971281 -57658869 + MIR SINE MIR 9 216 -46 599 194 8 8 chr5 141971371 141971495 -57658655 + MIR SINE MIR 70 193 -69 28 29 0 0 chr5 141971529 141971564 -57658586 + AT_rich Low_complexity Low_complexity 1 35 0 2101 129 7 0 chr5 141973479 141973773 -57656377 - AluSx SINE Alu -16 296 1 1801 109 0 64 chr5 141973785 141974097 -57656053 - L1PA11 LINE L1 0 6174 5883 248 211 13 0 chr5 141974609 141974685 -57655465 + GA-rich Low_complexity Low_complexity 2 78 0 518 262 78 19 chr5 141974976 141975182 -57654968 + MIR SINE MIR 23 240 -22 539 341 26 13 chr5 141975482 141975708 -57654442 + MIR SINE MIR 29 257 -5 846 204 11 6 chr5 141975842 141976018 -57654132 - MER5B DNA MER1_type -1 177 1 807 204 37 90 chr5 141976808 141977053 -57653097 + MIR SINE MIR 31 262 0 446 267 71 48 chr5 141979468 141979678 -57650472 - Charlie8 DNA MER1_type -2163 254 40 198 0 0 0 chr5 141979679 141979701 -57650449 + (CA)n Simple_repeat Simple_repeat 1 22 0 2069 138 0 3 chr5 141979869 141980200 -57649950 + AluSx SINE Alu 1 312 0 2040 106 46 3 chr5 141980794 141981078 -57649072 - AluSg SINE Alu -14 296 1 252 204 45 45 chr5 141981114 141981202 -57648948 - L1ME1 LINE L1 -8 6158 6071 536 184 0 0 chr5 141981327 141981414 -57648736 - AluJ/FLAM SINE Alu -225 87 1 191 341 61 0 chr5 141981420 141981502 -57648648 - L2 LINE L2 -50 3222 3136 196 340 103 80 chr5 141981565 141981827 -57648323 - L2 LINE L2 0 3272 3005 2118 103 0 21 chr5 141982330 141982643 -57647507 + AluSx SINE Alu 1 307 0 279 133 0 0 chr5 141982719 141982764 -57647386 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 192 263 25 25 chr5 141983066 141983146 -57647004 + MIR SINE MIR 175 254 -8 321 180 20 20 chr5 141983148 141983248 -57646902 + GA-rich Low_complexity Low_complexity 2 101 0 23 0 0 0 chr5 141984362 141984385 -57645765 + AT_rich Low_complexity Low_complexity 1 23 0 2012 119 0 25 chr5 141984388 141984673 -57645477 - AluSx SINE Alu -21 291 14 1062 325 56 7 chr5 141985462 141985871 -57644279 + L2 LINE L2 2804 3232 -81 1907 140 48 0 chr5 141987498 141987790 -57642360 + AluSx SINE Alu 1 306 -6 309 209 27 109 chr5 141987792 141987837 -57642313 + MER5B DNA MER1_type 78 125 -53 2602 49 0 0 chr5 141987837 141988145 -57642005 - AluY SINE Alu -3 308 1 309 209 27 109 chr5 141988145 141988209 -57641941 + MER5B DNA MER1_type 125 178 0 954 237 49 19 chr5 141988380 141988705 -57641445 - L1ME1 LINE L1 -5 6161 5827 1379 173 57 70 chr5 141988719 141988964 -57641186 - MLT2D LTR ERVL -48 366 126 6192 95 12 1 chr5 141988964 141990198 -57639952 + L1PA13 LINE L1 4915 6158 -5 1379 173 57 70 chr5 141990198 141990321 -57639829 - MLT2D LTR ERVL -288 126 3 4632 217 121 32 chr5 141990331 141990548 -57639602 - L1ME1 LINE L1 -1212 4934 4738 2558 51 0 19 chr5 141990548 141990864 -57639286 + AluY SINE Alu 1 310 -1 4632 217 121 32 chr5 141990864 141992326 -57637824 - L1ME1 LINE L1 -1408 4738 3068 2186 112 10 3 chr5 141992326 141992622 -57637528 - AluY SINE Alu -13 298 1 4632 217 121 32 chr5 141992622 141992819 -57637331 - L1ME1 LINE L1 -3078 3068 2890 431 223 121 25 chr5 141992855 141993137 -57637013 - L1ME4a LINE L1 -202 5919 5611 21 0 0 0 chr5 141993332 141993353 -57636797 + AT_rich Low_complexity Low_complexity 1 21 0 668 335 45 3 chr5 141993400 141993710 -57636440 + MER102b DNA MER1_type 17 339 -2 782 62 0 18 chr5 141995464 141995577 -57634573 + LTR7 LTR ERV1 338 448 -2 15180 94 14 17 chr5 141995579 141998392 -57631758 + HERVH LTR ERV1 1 2995 -4718 811 125 46 13 chr5 141998363 141998515 -57631635 + HERVH LTR ERV1 3134 3290 -4423 * 889 162 0 7 chr5 141998505 141998659 -57631491 + HERVH LTR ERV1 3492 3644 -4069 2354 167 0 2 chr5 141998661 141999069 -57631081 + HERVH LTR ERV1 4743 5149 -2564 1049 117 96 0 chr5 141999104 141999292 -57630858 + HERVH LTR ERV1 5614 5819 -1894 2169 93 50 16 chr5 141999292 141999669 -57630481 + HERVH LTR ERV1 7324 7713 0 3081 48 0 7 chr5 141999669 142000084 -57630066 + LTR7 LTR ERV1 1 412 -38 665 252 93 19 chr5 142002522 142002832 -57627318 - LTR16B LTR ERVL -1 463 131 425 99 127 0 chr5 142003492 142003563 -57626587 - MADE1 DNA Mariner 0 80 1 775 264 10 6 chr5 142004520 142004921 -57625229 - LTR16A LTR ERVL -2 448 18 280 237 26 0 chr5 142005372 142005448 -57624702 - MLT1J LTR MaLR -333 178 101 251 192 51 51 chr5 142006411 142006489 -57623661 - MER5A DNA MER1_type -103 86 9 627 165 0 0 chr5 142006520 142006635 -57623515 + L1MA5A LINE L1 6162 6276 -21 302 167 0 15 chr5 142006676 142006742 -57623408 + CT-rich Low_complexity Low_complexity 2 66 0 486 209 47 8 chr5 142006742 142006871 -57623279 - MER5B DNA MER1_type -44 134 1 236 197 0 16 chr5 142007265 142007326 -57622824 + GA-rich Low_complexity Low_complexity 3 62 0 24 0 0 0 chr5 142007748 142007772 -57622378 + AT_rich Low_complexity Low_complexity 1 24 0 254 322 34 34 chr5 142009385 142009503 -57620647 + MIR SINE MIR 55 172 -90 21 0 0 0 chr5 142011162 142011183 -57618967 + AT_rich Low_complexity Low_complexity 1 21 0 425 271 108 61 chr5 142011850 142012145 -57618005 + HAL1 LINE L1 4 312 -2195 270 296 53 23 chr5 142012148 142012280 -57617870 + L1MC4a LINE L1 5804 5939 -1869 2189 117 33 0 chr5 142012341 142012640 -57617510 + AluSx SINE Alu 1 309 -3 2273 245 103 29 chr5 142012642 142013775 -57616375 + HAL1 LINE L1 1027 2243 -264 202 194 0 0 chr5 142013778 142013814 -57616336 + GA-rich Low_complexity Low_complexity 1 36 0 612 235 34 54 chr5 142013872 142014021 -57616129 + MIR SINE MIR 17 162 -100 893 194 0 12 chr5 142014021 142014186 -57615964 + FRAM SINE Alu 1 160 -16 335 316 0 0 chr5 142014186 142014284 -57615866 + MIR SINE MIR 155 252 -10 227 284 80 25 chr5 142014297 142014459 -57615691 + HAL1 LINE L1 2252 2422 -85 230 329 0 14 chr5 142015363 142015433 -57614717 - L2 LINE L2 -14 3258 3190 222 91 0 0 chr5 142016680 142016713 -57613437 + (GA)n Simple_repeat Simple_repeat 1 33 0 2078 140 0 3 chr5 142017007 142017323 -57612827 + AluSx SINE Alu 1 312 0 2134 123 3 3 chr5 142020251 142020551 -57609599 + AluSx SINE Alu 1 300 -12 287 278 42 113 chr5 142024021 142024233 -57605917 - MIR SINE MIR -56 206 10 460 266 179 43 chr5 142024553 142024854 -57605296 + L1ME4a LINE L1 5572 5913 -208 2052 159 22 0 chr5 142024917 142025275 -57604875 + MER47A DNA MER2_type 1 366 0 1813 86 0 0 chr5 142025283 142025517 -57604633 - AluY SINE Alu -19 292 59 676 69 69 0 chr5 142025568 142025727 -57604423 + (TA)n Simple_repeat Simple_repeat 1 170 0 21 0 0 0 chr5 142025739 142025760 -57604390 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr5 142025808 142025835 -57604315 + AT_rich Low_complexity Low_complexity 1 27 0 620 217 8 0 chr5 142025835 142025955 -57604195 - FLAM_A SINE Alu -12 121 1 506 101 45 11 chr5 142025956 142026045 -57604105 + MLT1E2 LTR MaLR 535 626 0 1003 221 19 0 chr5 142026406 142026614 -57603536 - MER58A DNA MER1_type -9 215 4 1998 181 40 2 chr5 142026955 142027352 -57602798 - MLT1C LTR MaLR 0 467 56 359 347 23 0 chr5 142027995 142028168 -57601982 + L1MC/D LINE L1 5526 5702 -2106 247 26 0 0 chr5 142028578 142028616 -57601534 - L1PA6 LINE L1 0 6154 6117 261 0 0 0 chr5 142028635 142028664 -57601486 + (TG)n Simple_repeat Simple_repeat 2 30 0 186 276 126 0 chr5 142028666 142028753 -57601397 - L3 LINE CR1 -737 840 743 274 383 166 23 chr5 142028849 142029288 -57600862 - L3 LINE CR1 -1030 547 46 21 0 0 0 chr5 142030894 142030915 -57599235 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 142032174 142032196 -57597954 + (A)n Simple_repeat Simple_repeat 1 22 0 473 320 15 60 chr5 142033875 142034075 -57596075 - MIR3 SINE MIR -15 193 3 272 247 34 34 chr5 142035482 142035571 -57594579 - MIR3 SINE MIR -1 207 119 3211 164 48 5 chr5 142035588 142036168 -57593982 - MER6A DNA MER2_type 0 605 1 282 271 23 28 chr5 142037641 142037818 -57592332 - MER104 DNA Tc2 -1 179 4 490 224 142 0 chr5 142037936 142038070 -57592080 - MIR SINE MIR -1 261 109 28 0 0 0 chr5 142038092 142038120 -57592030 + AT_rich Low_complexity Low_complexity 1 28 0 185 346 25 12 chr5 142038131 142038212 -57591938 - MIR SINE MIR -180 82 1 582 112 0 11 chr5 142040241 142040330 -57589820 - Tigger5 DNA MER2_type -1 2322 2235 * 1266 185 26 0 chr5 142040318 142040550 -57589600 - Tigger5 DNA MER2_type -2085 238 1 644 272 31 36 chr5 142040892 142041116 -57589034 + MIR SINE MIR 29 251 -11 324 0 0 0 chr5 142041160 142041196 -57588954 + (CA)n Simple_repeat Simple_repeat 2 37 0 278 301 167 20 chr5 142041743 142042139 -57588011 - L1ME4a LINE L1 -14 6107 5654 1564 238 72 17 chr5 142042574 142043211 -57586939 - L1ME1 LINE L1 -3 6331 5479 21 67 0 40 chr5 142043338 142043413 -57586737 + AT_rich Low_complexity Low_complexity 1 72 0 614 250 77 41 chr5 142043708 142043904 -57586246 + MIR SINE MIR 4 206 -56 1884 184 32 104 chr5 142044801 142045371 -57584779 - L1M4 LINE L1 -2846 3300 2791 2672 64 3 0 chr5 142045371 142045713 -57584437 + L1PA6 LINE L1 5810 6152 -2 1884 184 32 104 chr5 142045713 142045865 -57584285 - L1M4 LINE L1 -3355 2791 2630 567 219 115 50 chr5 142045909 142046169 -57583981 + MER113 DNA MER1_type? 137 413 -108 277 266 43 53 chr5 142047354 142047448 -57582702 + L2 LINE L2 3181 3273 -40 23 0 0 0 chr5 142047678 142047701 -57582449 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr5 142047944 142047970 -57582180 + AT_rich Low_complexity Low_complexity 1 26 0 255 279 0 0 chr5 142049243 142049311 -57580839 + L2 LINE L2 3119 3186 -86 180 218 0 91 chr5 142053238 142053293 -57576857 + L2 LINE L2 3219 3268 -4 23 0 0 0 chr5 142053713 142053736 -57576414 + AT_rich Low_complexity Low_complexity 1 23 0 293 264 47 38 chr5 142054667 142054773 -57575377 + L2 LINE L2 3200 3306 -7 916 253 94 26 chr5 142055509 142055968 -57574182 - MER113 DNA MER1_type? 0 521 32 431 108 43 0 chr5 142056578 142056671 -57573479 + GA-rich Low_complexity Low_complexity 1 97 0 421 221 0 0 chr5 142056860 142056946 -57573204 + MIR3 SINE MIR 119 204 -4 2265 110 10 0 chr5 142059782 142060082 -57570068 + AluSx SINE Alu 1 303 -9 1568 217 7 3 chr5 142060103 142060403 -57569747 + AluJo SINE Alu 1 301 -11 183 80 0 0 chr5 142060549 142060574 -57569576 + (T)n Simple_repeat Simple_repeat 1 25 0 422 304 199 61 chr5 142060662 142061184 -57568966 - L2 LINE L2 -1 3312 2724 970 204 5 5 chr5 142061186 142061377 -57568773 - MLT1A1 LTR MaLR -174 191 1 769 297 158 34 chr5 142061380 142062140 -57568010 - L2 LINE L2 -774 2540 1687 317 275 115 64 chr5 142062209 142062427 -57567723 - L2 LINE L2 -402 2912 2684 358 167 326 53 chr5 142062465 142062597 -57567553 - MER5A DNA MER1_type 0 189 22 2081 147 7 0 chr5 142063464 142063771 -57566379 - AluSx SINE Alu -3 309 1 24 67 0 0 chr5 142064157 142064202 -57565948 + AT_rich Low_complexity Low_complexity 1 45 0 518 292 36 0 chr5 142065322 142065513 -57564637 + MIR SINE MIR 32 230 -32 705 282 155 19 chr5 142066107 142066526 -57563624 + L3 LINE CR1 1055 1530 -47 324 217 58 50 chr5 142066581 142066701 -57563449 - L1MC4 LINE L1 0 8042 7922 792 286 194 19 chr5 142066881 142067308 -57562842 + L2 LINE L2 2812 3313 0 2573 140 31 5 chr5 142067448 142067863 -57562287 - MSTA LTR MaLR -2 426 1 966 235 27 27 chr5 142068678 142068938 -57561212 + MIR SINE MIR 3 262 0 224 298 93 50 chr5 142069001 142069194 -57560956 - MIR SINE MIR -55 207 2 23 0 0 0 chr5 142071319 142071342 -57558808 + AT_rich Low_complexity Low_complexity 1 23 0 266 316 79 7 chr5 142074170 142074309 -57555841 + L2 LINE L2 2916 3064 -208 1068 197 6 0 chr5 142074327 142074510 -57555640 + MER5A DNA MER1_type 6 189 0 27 49 0 0 chr5 142074806 142074847 -57555303 + AT_rich Low_complexity Low_complexity 1 41 0 470 288 7 36 chr5 142074883 142075022 -57555128 + MIR SINE MIR 20 154 -108 196 325 119 53 chr5 142075928 142076676 -57553474 + L2 LINE L2 1474 2270 -1044 650 296 79 21 chr5 142077090 142077330 -57552820 + MIR SINE MIR 8 261 -1 184 342 132 0 chr5 142077666 142077742 -57552408 + L2 LINE L2 3183 3268 -4 208 265 0 20 chr5 142077967 142078016 -57552134 + MIR SINE MIR 31 78 -130 210 283 0 0 chr5 142078981 142079073 -57551077 + (TATG)n Simple_repeat Simple_repeat 3 94 0 228 319 0 14 chr5 142079100 142079169 -57550981 - MIR SINE MIR -119 143 76 429 312 12 35 chr5 142079332 142079502 -57550648 + MIR SINE MIR 64 229 -33 1051 171 36 54 chr5 142080575 142080797 -57549353 - MER20 DNA MER1_type -1 218 1 720 245 231 0 chr5 142080824 142081036 -57549114 + MIR SINE MIR 2 262 0 356 210 290 65 chr5 142081470 142081670 -57548480 - MIR SINE MIR 0 262 18 282 95 0 0 chr5 142081873 142081915 -57548235 + (GA)n Simple_repeat Simple_repeat 2 43 0 365 320 64 0 chr5 142082565 142082690 -57547460 - L3 LINE CR1 -8 1569 1437 1034 246 45 24 chr5 142085961 142086291 -57543859 + MER102b DNA MER1_type 1 337 -4 2186 109 20 0 chr5 142087180 142087483 -57542667 + AluY SINE Alu 1 309 -2 482 319 6 6 chr5 142088405 142088571 -57541579 - MARNA DNA Mariner -370 216 51 369 109 0 0 chr5 142088918 142088973 -57541177 + (CA)n Simple_repeat Simple_repeat 2 56 0 321 283 26 26 chr5 142090098 142090211 -57539939 - MIR SINE MIR -73 189 77 196 239 159 53 chr5 142090407 142090520 -57539630 - MIR SINE MIR -66 142 18 40449 36 22 1 chr5 142091132 142097151 -57532999 + L1PA2 LINE L1 5 6150 -5 300 120 0 0 chr5 142097158 142097208 -57532942 + (TC)n Simple_repeat Simple_repeat 1 50 0 370 333 201 37 chr5 142097376 142097779 -57532371 + L3 LINE CR1 1071 1539 -38 944 197 22 0 chr5 142098530 142098713 -57531437 - MER5A DNA MER1_type -1 188 2 23 0 0 0 chr5 142098924 142098947 -57531203 + AT_rich Low_complexity Low_complexity 1 23 0 291 300 0 0 chr5 142102065 142102145 -57528005 + GA-rich Low_complexity Low_complexity 2 81 0 675 211 66 0 chr5 142102499 142102651 -57527499 - MER63A DNA MER1_type 0 210 49 391 260 201 39 chr5 142103051 142103255 -57526895 - MIR SINE MIR -13 249 13 265 273 26 13 chr5 142103516 142103593 -57526557 + L3 LINE CR1 1404 1481 -96 1655 198 27 3 chr5 142103599 142103892 -57526258 - AluJo SINE Alu -12 300 1 45 34 0 0 chr5 142104547 142104606 -57525544 + AT_rich Low_complexity Low_complexity 1 59 0 1020 119 23 0 chr5 142104711 142104887 -57525263 - L1MA4 LINE L1 -4 6296 6117 255 330 140 0 chr5 142104896 142104996 -57525154 - MIR3 SINE MIR -54 154 41 240 233 0 0 chr5 142106982 142107055 -57523095 + (TA)n Simple_repeat Simple_repeat 2 74 0 237 355 126 51 chr5 142107788 142108338 -57521812 + L2 LINE L2 2387 2977 -337 1098 235 125 35 chr5 142108406 142108886 -57521264 + LTR33A LTR ERVL 1 523 0 273 254 279 8 chr5 142109061 142109183 -57520967 + L2 LINE L2 3117 3271 -1 2210 128 0 0 chr5 142109223 142109527 -57520623 - AluSx SINE Alu -8 304 1 365 263 20 10 chr5 142110041 142110140 -57520010 - MIR SINE MIR -68 140 41 35 71 0 0 chr5 142110155 142110225 -57519925 + AT_rich Low_complexity Low_complexity 1 70 0 1794 75 20 4 chr5 142110495 142110747 -57519403 - MER41A LTR ERV1 -8 546 291 395 71 0 0 chr5 142110746 142110802 -57519348 - MER41A LTR ERV1 -478 76 21 * 1443 153 25 64 chr5 142110802 142111083 -57519067 + AluJo SINE Alu 13 282 -30 369 0 0 0 chr5 142111086 142111127 -57519023 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 2164 129 3 0 chr5 142111621 142111923 -57518227 + AluSp SINE Alu 1 303 -10 479 252 74 7 chr5 142112661 142112796 -57517354 + MIR SINE MIR 119 262 0 278 281 180 0 chr5 142114216 142114344 -57515806 - MIR SINE MIR -13 249 99 1976 143 0 3 chr5 142115251 142115590 -57514560 + AluSx SINE Alu 1 312 0 1394 25 0 0 chr5 142116555 142116714 -57513436 + L1PA5 LINE L1 5980 6138 -16 387 0 0 0 chr5 142116733 142116776 -57513374 + (CA)n Simple_repeat Simple_repeat 2 44 0 231 36 0 0 chr5 142116894 142116922 -57513228 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 699 285 115 58 chr5 142116928 142117025 -57513125 - L2 LINE L2 -18 3295 3205 1086 174 40 0 chr5 142117025 142117226 -57512924 + MER3 DNA MER1_type 1 209 0 699 285 115 58 chr5 142117226 142117402 -57512748 - L2 LINE L2 -108 3205 3040 2209 93 0 4 chr5 142117402 142117706 -57512444 + AluSc SINE Alu 1 303 0 699 285 115 58 chr5 142117706 142118249 -57511901 - L2 LINE L2 -273 3040 2448 24 0 0 0 chr5 142118464 142118488 -57511662 + AT_rich Low_complexity Low_complexity 1 24 0 1604 154 34 83 chr5 142118520 142118844 -57511306 + AluJo SINE Alu 1 308 -4 238 245 0 0 chr5 142120744 142120797 -57509353 - Charlie8 DNA MER1_type -990 1427 1375 244 371 60 0 chr5 142120816 142120932 -57509218 + L2 LINE L2 3150 3272 0 2509 91 28 25 chr5 142121094 142121456 -57508694 - THE1B LTR MaLR -1 363 1 563 223 37 48 chr5 142121593 142121781 -57508369 - L1ME3A LINE L1 -146 6024 5839 687 176 8 8 chr5 142122082 142122207 -57507943 - FLAM_C SINE Alu -18 125 1 402 21 0 0 chr5 142123366 142123413 -57506737 + (T)n Simple_repeat Simple_repeat 1 47 0 2336 128 0 0 chr5 142123607 142123919 -57506231 - AluSx SINE Alu 0 312 1 21 36 0 0 chr5 142124775 142124803 -57505347 + AT_rich Low_complexity Low_complexity 1 28 0 605 218 0 94 chr5 142125794 142125964 -57504186 - MER5B DNA MER1_type -24 154 1 412 140 103 0 chr5 142177608 142177715 -57452435 + L1PA16 LINE L1 6040 6157 -9 1419 207 51 22 chr5 142178231 142179070 -57451080 - L1MD1 LINE L1 -1 6241 5428 663 222 0 15 chr5 142179070 142179205 -57450945 - FLAM_A SINE Alu 0 133 1 1419 207 51 22 chr5 142179205 142179377 -57450773 - L1MD1 LINE L1 -814 5428 5262 2047 124 3 7 chr5 142179377 142179675 -57450475 - AluSx SINE Alu -15 297 1 1419 207 51 22 chr5 142179675 142179931 -57450219 - L1MD1 LINE L1 -980 5262 4901 393 176 15 0 chr5 142179932 142180000 -57450150 + L1MD1 LINE L1 6112 6180 -62 7574 30 0 0 chr5 142180367 142181667 -57448483 + L1PA4 LINE L1 4853 6154 -1 2866 247 48 5 chr5 142181695 142182590 -57447560 - L1MD1 LINE L1 -2094 4052 3119 208 206 0 0 chr5 142183307 142183341 -57446809 - L2 LINE L2 -90 3182 3149 242 125 21 0 chr5 142184064 142184112 -57446038 + CT-rich Low_complexity Low_complexity 2 50 0 262 287 52 26 chr5 142184112 142184227 -57445923 + L1M4 LINE L1 3728 3845 -2301 392 309 34 79 chr5 142184343 142184796 -57445354 + L1M4 LINE L1 4498 4929 -1217 250 260 130 0 chr5 142184769 142184869 -57445281 + L1P LINE L1 4903 5015 -1131 * 4336 87 0 17 chr5 142184950 142185536 -57444614 - LTR17 LTR ERV1 0 780 205 2146 156 20 3 chr5 142185563 142185910 -57444240 + MER4E LTR ERV1 57 409 -370 799 64 82 0 chr5 142185911 142186021 -57444129 - LTR17 LTR ERV1 -558 222 104 5423 171 39 41 chr5 142186105 142186542 -57443608 + L1MC1 LINE L1 4809 5245 -1088 1983 153 6 18 chr5 142186542 142186882 -57443268 - MER1B DNA MER1_type 0 337 2 5423 171 39 41 chr5 142186882 142187853 -57442297 + L1MC1 LINE L1 5245 6212 -121 3774 113 57 0 chr5 142187853 142188430 -57441720 - MER4B LTR ERV1 0 610 1 5423 171 39 41 chr5 142188430 142188552 -57441598 + L1MC1 LINE L1 6212 6333 0 767 257 99 67 chr5 142188663 142189079 -57441071 - MLT1K LTR MaLR -23 565 137 189 74 0 0 chr5 142189120 142189147 -57441003 + (T)n Simple_repeat Simple_repeat 1 27 0 1504 82 0 0 chr5 142189168 142189364 -57440786 - L1PA8 LINE L1 -13 6159 5964 31 0 0 0 chr5 142189567 142189598 -57440552 + AT_rich Low_complexity Low_complexity 1 31 0 407 320 163 0 chr5 142189983 142190130 -57440020 - MER5A DNA MER1_type -11 178 8 312 27 0 0 chr5 142191042 142191079 -57439071 + (GA)n Simple_repeat Simple_repeat 1 37 0 512 40 0 53 chr5 142191221 142191296 -57438854 - MLT2A2 LTR ERVL 0 453 383 3013 93 13 0 chr5 142191327 142191725 -57438425 - MLT2A2 LTR ERVL -50 403 1 714 119 42 49 chr5 142191793 142191964 -57438186 - AluSx SINE Alu 0 312 171 * 753 107 0 0 chr5 142191963 142192066 -57438084 - AluSx SINE Alu -210 103 1 3998 57 6 13 chr5 142194761 142195291 -57434859 - L1PA4 LINE L1 -3 6152 5627 183 240 0 20 chr5 142195306 142195356 -57434794 - L2 LINE L2 -252 3061 3013 2448 169 24 39 chr5 142195546 142196056 -57434094 - L1MA9 LINE L1 -299 6013 5512 28661 122 16 58 chr5 142196156 142200972 -57429178 - L1P LINE L1 -1146 5000 423 234 0 0 0 chr5 142200972 142200998 -57429152 + (CAA)n Simple_repeat Simple_repeat 2 27 0 28661 122 16 58 chr5 142200998 142201402 -57428748 - L1P LINE L1 -5723 423 3 7343 251 57 17 chr5 142201402 142203774 -57426376 - L1P LINE L1 -1131 5015 2551 14237 199 68 17 chr5 142203934 142210410 -57419740 - L1PB1 LINE L1 -58 6809 6 266 319 159 62 chr5 142210477 142210753 -57419397 + L2 LINE L2 2970 3272 0 5789 143 25 48 chr5 142210963 142212154 -57417996 + L1MC1 LINE L1 5171 6333 0 379 259 161 43 chr5 142212238 142212400 -57417750 + MER5A DNA MER1_type 9 189 0 343 339 55 48 chr5 142212422 142212545 -57417605 + MIR3 SINE MIR 33 159 -49 592 226 128 0 chr5 142212545 142212709 -57417441 + MER5A DNA MER1_type 5 189 0 343 339 55 48 chr5 142212709 142212750 -57417400 + MIR3 SINE MIR 159 198 -10 33 66 0 0 chr5 142212872 142212933 -57417217 + AT_rich Low_complexity Low_complexity 1 61 0 282 324 9 30 chr5 142214348 142214572 -57415578 + GA-rich Low_complexity Low_complexity 1 219 0 278 270 100 0 chr5 142214868 142214968 -57415182 - L1ME LINE L1 -5917 153 44 463 284 84 13 chr5 142215005 142215160 -57414990 - L2 LINE L2 -1177 2137 1972 180 0 0 0 chr5 142215373 142215393 -57414757 + (T)n Simple_repeat Simple_repeat 1 20 0 251 340 46 89 chr5 142215469 142215751 -57414399 + L2 LINE L2 2976 3245 -27 205 86 29 0 chr5 142216666 142216701 -57413449 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 229 375 115 29 chr5 142218845 142219053 -57411097 - L2 LINE L2 -10 3262 3037 470 279 33 70 chr5 142219505 142219749 -57410401 - L2 LINE L2 0 3313 3079 * 1131 265 95 59 chr5 142219734 142220240 -57409910 - L2 LINE L2 -1002 2312 1789 375 265 15 38 chr5 142220250 142220382 -57409768 - MER94 DNA DNA 0 134 6 642 252 126 17 chr5 142220386 142220616 -57409534 - L1MC4 LINE L1 -1012 7030 6776 266 305 116 11 chr5 142222035 142222130 -57408020 + MIR SINE MIR 41 145 -63 1772 218 90 13 chr5 142222130 142222625 -57407525 - MER77 LTR ERV1 0 605 46 2168 89 0 14 chr5 142222872 142223182 -57406968 - AluSc SINE Alu 0 306 1 2979 148 25 14 chr5 142223846 142224406 -57405744 + L1PA16 LINE L1 5598 6163 -3 203 338 70 0 chr5 142224460 142224531 -57405619 - L2 LINE L2 -47 3225 3150 1121 237 115 32 chr5 142225874 142226434 -57403716 - MLT1D LTR MaLR -3 502 1 663 180 8 23 chr5 142226717 142226845 -57403305 + LTR40b LTR ERVL 302 427 -35 247 323 105 40 chr5 142227341 142227465 -57402685 + MIR3 SINE MIR 52 183 -25 427 306 41 70 chr5 142227521 142227864 -57402286 - L1M4 LINE L1 -3150 2996 2664 329 259 140 40 chr5 142228012 142228240 -57401910 - L1M4 LINE L1 -3747 2399 2149 24605 27 2 2 chr5 142228774 142232493 -57397657 + L1PA2 LINE L1 2419 6154 -1 377 333 27 7 chr5 142232508 142232658 -57397492 - MIR SINE MIR -42 220 68 2512 265 75 18 chr5 142232762 142234479 -57395671 - L1MCa LINE L1 -2941 3485 1503 297 20 39 20 chr5 142235194 142235245 -57394905 + (TTTTTA)n Simple_repeat Simple_repeat 2 53 0 2861 16 0 0 chr5 142235363 142235677 -57394473 - AluYb8 SINE Alu -4 314 1 257 333 42 10 chr5 142235983 142236079 -57394071 - MIR SINE MIR -115 147 49 1735 179 10 7 chr5 142236878 142237186 -57392964 + AluJb SINE Alu 1 309 -3 2190 144 15 20 chr5 142237336 142237739 -57392411 - L1M2 LINE L1 -604 6647 6247 784 171 0 0 chr5 142237739 142237879 -57392271 - AluJb SINE Alu 0 312 173 338 70 0 0 chr5 142237929 142237972 -57392178 - AluSp SINE Alu -130 173 131 1272 199 12 9 chr5 142237977 142238318 -57391832 - L1M2 LINE L1 -856 6250 5740 * 4499 218 134 59 chr5 142238299 142242549 -57387601 - L1M2 LINE L1 -2804 4302 1 310 192 26 39 chr5 142242557 142242635 -57387515 - L1ME LINE L1 -495 5675 5599 26 0 0 0 chr5 142242646 142242672 -57387478 + AT_rich Low_complexity Low_complexity 1 26 0 292 280 27 0 chr5 142242691 142242766 -57387384 - MER21B LTR ERV1 -775 88 12 616 239 176 10 chr5 142242787 142243180 -57386970 - L1ME LINE L1 -553 5609 5149 21 0 0 0 chr5 142243892 142243913 -57386237 + AT_rich Low_complexity Low_complexity 1 21 0 183 80 0 0 chr5 142244476 142244501 -57385649 + (TATG)n Simple_repeat Simple_repeat 2 26 0 188 274 192 62 chr5 142245387 142245533 -57384617 + L2 LINE L2 3132 3296 -17 192 299 91 26 chr5 142245858 142245935 -57384215 + MIR SINE MIR 22 103 -105 224 162 0 81 chr5 142246035 142246109 -57384041 + A-rich Low_complexity Low_complexity 1 68 0 230 257 0 40 chr5 142246775 142246849 -57383301 + MIR SINE MIR 77 147 -115 1713 183 82 8 chr5 142247592 142247970 -57382180 + L1MA6 LINE L1 5895 6300 0 22 56 0 0 chr5 142247989 142248025 -57382125 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 142249157 142249180 -57380970 + AT_rich Low_complexity Low_complexity 1 23 0 737 240 48 39 chr5 142249278 142249486 -57380664 - MER58A DNA MER1_type -14 210 1 538 255 142 77 chr5 142249594 142250331 -57379819 - HAL1 LINE L1 -175 2332 1438 1090 244 131 52 chr5 142250680 142250746 -57379404 - MLT1C LTR MaLR -1 466 407 2221 85 14 3 chr5 142250746 142251041 -57379109 + AluSg SINE Alu 1 298 -12 1090 244 131 52 chr5 142251041 142251401 -57378749 - MLT1C LTR MaLR -60 407 6 434 261 368 25 chr5 142251667 142251950 -57378200 - L2 LINE L2 0 3313 2934 1181 302 103 18 chr5 142251988 142252485 -57377665 - L2 LINE L2 -579 2735 2197 195 313 39 60 chr5 142252658 142252840 -57377310 + L2 LINE L2 3136 3313 0 23 33 0 0 chr5 142253359 142253389 -57376761 + AT_rich Low_complexity Low_complexity 1 30 0 31 58 0 0 chr5 142253460 142253512 -57376638 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 142253561 142253582 -57376568 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 142255357 142255385 -57374765 + AT_rich Low_complexity Low_complexity 1 28 0 2163 98 34 0 chr5 142255466 142255642 -57374508 - AluSg SINE Alu -4 306 115 188 33 0 33 chr5 142255642 142255672 -57374478 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2163 98 34 0 chr5 142255672 142255791 -57374359 - AluSg SINE Alu -195 115 1 1248 280 80 3 chr5 142256645 142257020 -57373130 - MLT1J2 LTR MaLR -32 418 15 610 252 198 29 chr5 142258268 142258506 -57371644 - MLT1J2 LTR MaLR -162 288 11 236 30 30 0 chr5 142258731 142258764 -57371386 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5658 22 0 0 chr5 142258766 142259415 -57370735 - L1PA4 LINE L1 -8 6147 5499 2114 110 39 0 chr5 142259616 142259898 -57370252 + AluSx SINE Alu 1 293 -19 948 185 0 13 chr5 142260968 142261125 -57369025 - FRAM SINE Alu -22 154 1 22 0 0 0 chr5 142261417 142261439 -57368711 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 142261535 142261556 -57368594 + AT_rich Low_complexity Low_complexity 1 21 0 2093 125 7 3 chr5 142262114 142262410 -57367740 + AluSx SINE Alu 1 297 -15 225 83 0 0 chr5 142262510 142262546 -57367604 - L1MC4 LINE L1 -1 8041 8006 1652 294 40 33 chr5 142262687 142262838 -57367312 - L1MEc LINE L1 -5607 789 641 796 222 57 24 chr5 142262838 142263050 -57367100 + MER20 DNA MER1_type 1 219 0 1652 294 40 33 chr5 142263050 142263618 -57366532 - L1MEc LINE L1 -5755 641 65 460 179 0 0 chr5 142263640 142263718 -57366432 - L1MC4 LINE L1 -1037 7005 6928 553 253 42 36 chr5 142263721 142263887 -57366263 - L1MC4 LINE L1 -1521 6521 6355 1827 241 25 58 chr5 142263900 142264464 -57365686 + L1M4 LINE L1 1 545 -5997 364 152 76 0 chr5 142264473 142264552 -57365598 - L1M4 LINE L1 -5349 1193 1109 330 198 44 44 chr5 142264581 142264672 -57365478 + L1M4 LINE L1 864 954 -5588 2568 204 103 11 chr5 142264681 142265417 -57364733 + L1M4 LINE L1 581 1539 -5003 1871 200 106 12 chr5 142265430 142265920 -57364230 + L1MB7 LINE L1 5630 6165 -19 2116 243 60 88 chr5 142265936 142267015 -57363135 - L1MC4a LINE L1 -1506 6302 5254 1647 152 65 4 chr5 142267269 142267546 -57362604 - AluSq SINE Alu -19 294 1 2249 109 0 0 chr5 142267607 142267911 -57362239 - AluSx SINE Alu -8 304 1 841 311 77 24 chr5 142268994 142269448 -57360702 - L1MCc LINE L1 -5914 509 32 616 251 30 18 chr5 142269566 142269733 -57360417 + LTR40c LTR ERVL 1 169 -296 1287 237 64 64 chr5 142269827 142270220 -57359930 + MER77 LTR ERV1 1 393 -212 1899 204 125 30 chr5 142270243 142270681 -57359469 + MER77 LTR ERV1 63 555 -50 2310 82 3 20 chr5 142270681 142270985 -57359165 - AluSp SINE Alu -14 299 1 1899 204 125 30 chr5 142270985 142271042 -57359108 + MER77 LTR ERV1 555 605 0 780 184 17 46 chr5 142271045 142271219 -57358931 + LTR40a LTR ERVL 347 515 -4 1119 206 61 87 chr5 142271295 142271605 -57358545 - AluJo SINE Alu 0 302 1 531 244 109 57 chr5 142271648 142271841 -57358309 + MLT1J1 LTR MaLR 3 205 -241 251 232 71 20 chr5 142271911 142272010 -57358140 + MLT1J1 LTR MaLR 343 446 0 622 329 133 9 chr5 142273203 142273534 -57356616 + MLT1J1 LTR MaLR 1 372 -74 226 284 49 25 chr5 142273516 142273597 -57356553 + MLT1J2 LTR MaLR 361 443 -7 * 24 67 0 0 chr5 142273876 142273921 -57356229 + AT_rich Low_complexity Low_complexity 1 45 0 452 281 235 21 chr5 142274565 142274850 -57355300 + L2 LINE L2 2956 3301 -12 320 222 32 0 chr5 142274913 142274976 -57355174 - L2 LINE L2 -678 2636 2572 586 305 25 15 chr5 142274976 142275173 -57354977 - L2 LINE L2 -1934 1380 1182 481 316 83 26 chr5 142275347 142275850 -57354300 - L1M4 LINE L1 -1732 4414 3883 1654 177 60 0 chr5 142276056 142276338 -57353812 - AluJo SINE Alu -12 300 2 2204 135 0 0 chr5 142276991 142277303 -57352847 - AluSx SINE Alu 0 312 1 791 200 0 0 chr5 142277492 142277627 -57352523 - MER58A DNA MER1_type -1 223 89 7451 184 3 1 chr5 142277638 142279844 -57350306 - L1PA15 LINE L1 -1 7602 5389 * 18548 40 3 2 chr5 142279839 142282937 -57347213 - L1PA4 LINE L1 -3 6152 3049 6214 42 1 0 chr5 142282941 142283721 -57346429 + L1PA4 LINE L1 2266 3046 -3100 * 10842 212 21 16 chr5 142283716 142286781 -57343369 - L1PA15 LINE L1 -2179 5405 2319 454 323 33 17 chr5 142288044 142288344 -57341806 - L1PA15 LINE L1 -7269 312 8 264 275 43 0 chr5 142288356 142288425 -57341725 - MER58A DNA MER1_type -23 84 13 296 241 13 0 chr5 142288653 142288732 -57341418 - HAL1b LINE L1 -508 840 761 251 328 0 0 chr5 142288753 142288811 -57341339 - MIR SINE MIR -153 109 52 1807 191 31 3 chr5 142288842 142289197 -57340953 - MLT1A1 LTR MaLR 0 365 1 456 366 98 16 chr5 142289204 142289664 -57340486 + L1M4 LINE L1 3634 4166 -1980 387 41 0 0 chr5 142291264 142291313 -57338837 + (TG)n Simple_repeat Simple_repeat 2 50 0 652 157 0 0 chr5 142291321 142291429 -57338721 - FLAM_C SINE Alu -33 110 3 232 105 26 0 chr5 142291472 142291510 -57338640 + L1MC5 LINE L1 7193 7231 -730 1097 200 5 10 chr5 142291576 142291781 -57338369 - AluJo SINE Alu -105 207 4 377 268 148 0 chr5 142292237 142292334 -57337816 + MIR SINE MIR 90 216 -46 378 0 0 0 chr5 142292334 142292376 -57337774 + (TG)n Simple_repeat Simple_repeat 2 43 0 377 268 148 0 chr5 142292376 142292420 -57337730 + MIR SINE MIR 216 252 -10 327 293 93 67 chr5 142294344 142294720 -57335430 + MLT1K LTR MaLR 195 580 -8 460 212 124 22 chr5 142295842 142295979 -57334171 + MER103 DNA DNA 13 163 -3 186 43 0 0 chr5 142296667 142296690 -57333460 + (TG)n Simple_repeat Simple_repeat 2 24 0 27 0 0 0 chr5 142298364 142298391 -57331759 + AT_rich Low_complexity Low_complexity 1 27 0 237 281 73 0 chr5 142301123 142301205 -57328945 - MIR3 SINE MIR -12 196 109 196 362 96 10 chr5 142301519 142301718 -57328432 + L2 LINE L2 2869 3084 -188 207 0 0 0 chr5 142301977 142302000 -57328150 + (A)n Simple_repeat Simple_repeat 1 23 0 276 280 84 28 chr5 142302354 142302497 -57327653 - L2 LINE L2 -8 3305 3155 219 167 24 0 chr5 142302617 142302659 -57327491 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 22 0 0 0 chr5 142304397 142304419 -57325731 + AT_rich Low_complexity Low_complexity 1 22 0 785 244 84 4 chr5 142304932 142304986 -57325164 - MIR SINE MIR -3 259 211 243 0 0 0 chr5 142304986 142305013 -57325137 + (TG)n Simple_repeat Simple_repeat 2 28 0 785 244 84 4 chr5 142305013 142305196 -57324954 - MIR SINE MIR -51 211 3 209 250 0 0 chr5 142305844 142305884 -57324266 + MIR SINE MIR 223 262 0 315 323 94 21 chr5 142308526 142308718 -57321432 + L3b LINE CR1 1267 1472 -111 467 248 23 16 chr5 142309430 142309559 -57320591 + L2 LINE L2 3184 3313 0 304 309 170 55 chr5 142311374 142311704 -57318446 - L1M2 LINE L1 -5703 1146 779 202 224 0 20 chr5 142312176 142312225 -57317925 + CT-rich Low_complexity Low_complexity 2 49 0 351 306 36 51 chr5 142313336 142313532 -57316618 + MLT1K LTR MaLR 2 194 -394 1852 107 12 83 chr5 142313619 142313751 -57316399 + AluSg SINE Alu 1 141 -169 225 0 0 0 chr5 142313751 142313776 -57316374 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1852 107 12 83 chr5 142313776 142313970 -57316180 + AluSg SINE Alu 141 304 -6 238 274 0 14 chr5 142314109 142314182 -57315968 + LTR67 LTR ERVL 485 556 -1 21 36 0 0 chr5 142315038 142315066 -57315084 + AT_rich Low_complexity Low_complexity 1 28 0 864 39 0 0 chr5 142316836 142316939 -57313211 + AluY SINE Alu 205 307 -4 1915 142 0 33 chr5 142317619 142317922 -57312228 - AluSq SINE Alu -20 293 1 626 219 88 36 chr5 142318594 142318786 -57311364 - MIR SINE MIR -23 239 38 552 298 71 21 chr5 142319035 142319273 -57310877 + MIR SINE MIR 13 262 0 3591 227 60 25 chr5 142319445 142321244 -57308906 - L1ME2 LINE L1 -9 6155 4296 457 221 145 28 chr5 142321403 142321548 -57308602 - MLT1H LTR MaLR -5 544 383 25 0 0 0 chr5 142321913 142321938 -57308212 + AT_rich Low_complexity Low_complexity 1 25 0 694 305 101 57 chr5 142321972 142322822 -57307328 + L2 LINE L2 2327 3205 -67 1690 226 46 6 chr5 142323337 142323841 -57306309 - L1M4 LINE L1 -1327 4819 4296 328 200 192 31 chr5 142324003 142324133 -57306017 - MLT1H LTR MaLR -16 533 383 25 0 0 0 chr5 142324495 142324520 -57305630 + AT_rich Low_complexity Low_complexity 1 25 0 647 319 91 62 chr5 142324554 142325415 -57304735 + L2 LINE L2 2327 3205 -67 203 237 13 26 chr5 142326382 142326458 -57303692 + A-rich Low_complexity Low_complexity 3 77 0 2677 121 35 13 chr5 142326961 142327359 -57302791 - MER1A DNA MER1_type 0 529 123 777 131 49 0 chr5 142327545 142327667 -57302483 - MER1A DNA MER1_type -399 128 1 1395 182 146 10 chr5 142329176 142329478 -57300672 - MER2 DNA MER2_type 0 344 2 1995 134 6 34 chr5 142330648 142330968 -57299182 - AluSx SINE Alu -1 311 1 2245 107 3 0 chr5 142332256 142332556 -57297594 - AluSp SINE Alu -8 305 5 1245 159 9 0 chr5 142332928 142333148 -57297002 + LTR9B LTR ERV1 423 644 0 705 300 55 10 chr5 142333187 142333480 -57296670 - L1MC/D LINE L1 -2161 5647 5342 28 0 0 0 chr5 142333655 142333683 -57296467 + AT_rich Low_complexity Low_complexity 1 28 0 2209 102 0 3 chr5 142334399 142334713 -57295437 - AluSq SINE Alu 0 313 1 1880 159 0 23 chr5 142334715 142335016 -57295134 - AluJb SINE Alu -18 294 1 23 68 0 0 chr5 142335016 142335060 -57295090 + AT_rich Low_complexity Low_complexity 1 44 0 552 240 94 6 chr5 142335326 142335534 -57294616 - MIR SINE MIR -10 252 33 415 209 289 40 chr5 142336816 142337017 -57293133 + MIR SINE MIR 12 262 0 946 196 0 0 chr5 142338858 142339016 -57291134 + FRAM SINE Alu 1 158 -8 183 333 0 0 chr5 142339115 142339169 -57290981 - L3 LINE CR1 -10 1567 1514 1172 196 98 35 chr5 142339199 142339515 -57290635 + LTR40c LTR ERVL 130 465 0 210 250 118 13 chr5 142339859 142339935 -57290215 + L2 LINE L2 3229 3312 -1 23 33 0 0 chr5 142340060 142340090 -57290060 + AT_rich Low_complexity Low_complexity 1 30 0 556 245 21 11 chr5 142340207 142340395 -57289755 - L1MC5 LINE L1 -48 7913 7724 207 0 0 0 chr5 142340895 142340918 -57289232 + (CA)n Simple_repeat Simple_repeat 2 24 0 1918 186 137 24 chr5 142341158 142341204 -57288946 - MLT2B1 LTR ERVL 0 520 481 432 0 0 0 chr5 142341204 142341252 -57288898 + (TG)n Simple_repeat Simple_repeat 2 49 0 240 35 0 0 chr5 142341252 142341281 -57288869 + (GA)n Simple_repeat Simple_repeat 2 30 0 1918 186 137 24 chr5 142341281 142341700 -57288450 - MLT2B1 LTR ERVL -38 482 1 1165 112 126 142 chr5 142341943 142342309 -57287841 - MER46B DNA MER2_type 0 236 2 31 0 0 0 chr5 142342938 142342969 -57287181 + AT_rich Low_complexity Low_complexity 1 31 0 2533 216 41 25 chr5 142345654 142346294 -57283856 + L1ME1 LINE L1 5444 6093 -73 206 242 32 32 chr5 142346446 142346508 -57283642 - L3 LINE CR1 -322 1255 1194 1303 215 120 18 chr5 142347217 142347668 -57282482 - LTR54B LTR ERV1 -1 497 1 3821 162 67 6 chr5 142349153 142349796 -57280354 + MER54B LTR ERVL 1 682 -111 591 235 134 43 chr5 142350116 142350303 -57279847 + MER3 DNA MER1_type 6 209 0 349 248 32 93 chr5 142351721 142351967 -57278183 - L1ME4a LINE L1 -224 5897 5667 1215 177 27 75 chr5 142352251 142352579 -57277571 - MLT1A1 LTR MaLR -4 386 1 181 344 70 76 chr5 142352580 142352909 -57277241 - L2 LINE L2 -80 3192 2866 239 214 18 0 chr5 142353054 142353110 -57277040 - L1ME4a LINE L1 -704 5538 5482 387 285 131 7 chr5 142354001 142354138 -57276012 + MLT1I LTR MaLR 27 180 -229 613 324 57 33 chr5 142354988 142355321 -57274829 - MLT1L LTR MaLR -21 594 254 352 265 238 7 chr5 142355336 142355483 -57274667 + MER5A DNA MER1_type 9 189 0 306 253 13 0 chr5 142355501 142355576 -57274574 - MLT1J LTR MaLR -340 171 96 22 0 0 0 chr5 142357755 142357777 -57272373 + AT_rich Low_complexity Low_complexity 1 22 0 288 0 0 0 chr5 142357777 142357809 -57272341 + (TG)n Simple_repeat Simple_repeat 1 32 0 827 232 39 19 chr5 142358858 142359065 -57271085 - MER20 DNA MER1_type -8 211 1 327 49 0 0 chr5 142359886 142359927 -57270223 + (TG)n Simple_repeat Simple_repeat 2 42 0 184 239 87 0 chr5 142360534 142360580 -57269570 - L2 LINE L2 -14 3299 3250 232 203 34 34 chr5 142361028 142361087 -57269063 + MIR3 SINE MIR 148 206 -2 840 206 19 29 chr5 142361326 142361535 -57268615 + MER106A DNA MER1_type 29 235 -1 444 287 58 12 chr5 142362027 142362234 -57267916 + MIR SINE MIR 1 217 -45 206 100 0 50 chr5 142363229 142363269 -57266881 + (CAGAGA)n Simple_repeat Simple_repeat 4 41 0 180 77 0 0 chr5 142364172 142364198 -57265952 + (T)n Simple_repeat Simple_repeat 1 26 0 574 288 66 16 chr5 142364219 142364476 -57265674 - L1ME4a LINE L1 -78 6043 5774 2340 105 0 0 chr5 142364721 142365034 -57265116 - AluSq SINE Alu 0 313 1 2075 154 53 27 chr5 142365060 142365592 -57264558 - MLT2A2 LTR ERVL -1 553 1 24 67 0 0 chr5 142366340 142366385 -57263765 + AT_rich Low_complexity Low_complexity 1 45 0 1066 257 43 63 chr5 142366512 142367009 -57263141 - L1ME2 LINE L1 0 6162 5677 1530 190 23 11 chr5 142367037 142367384 -57262766 - L1MA9 LINE L1 0 6312 5962 3288 139 16 13 chr5 142367391 142367943 -57262207 + L1MA9 LINE L1 5377 5930 -382 303 276 23 0 chr5 142367960 142368047 -57262103 - L1ME2 LINE L1 -473 5691 5603 * 438 246 75 2 chr5 142368028 142368178 -57261972 - L1M3 LINE L1 -695 5476 5320 303 234 11 0 chr5 142368203 142368297 -57261853 - L1MA10 LINE L1 -14 6320 6226 1051 258 68 8 chr5 142368341 142368736 -57261414 - L1ME2 LINE L1 -155 6009 5591 1483 222 55 16 chr5 142368759 142369210 -57260940 - L1M3 LINE L1 -897 5249 4781 302 221 103 0 chr5 142369528 142369596 -57260554 - L2 LINE L2 -1 3312 3238 1867 159 3 3 chr5 142369919 142370208 -57259942 - AluJo SINE Alu -23 289 1 669 259 119 15 chr5 142370806 142371007 -57259143 - MER58A DNA MER1_type -1 223 2 2458 175 26 28 chr5 142371125 142371537 -57258613 + L1MA3 LINE L1 4919 5331 -974 725 190 0 0 chr5 142371537 142371658 -57258492 + FLAM_A SINE Alu 1 121 -12 2458 175 26 28 chr5 142371658 142372169 -57257981 + L1MA3 LINE L1 5331 5840 -465 5146 153 28 43 chr5 142372286 142372457 -57257693 + L1MA4 LINE L1 5156 5328 -972 725 190 0 0 chr5 142372457 142372578 -57257572 + FLAM_A SINE Alu 1 121 -12 5146 153 28 43 chr5 142372578 142373565 -57256585 + L1MA4 LINE L1 5328 6299 -1 375 320 48 39 chr5 142374172 142374378 -57255772 - L2 LINE L2 -31 3282 3075 241 231 0 0 chr5 142374410 142374462 -57255688 + (TG)n Simple_repeat Simple_repeat 1 52 0 1751 88 8 32 chr5 142374496 142374745 -57255405 + AluSg/x SINE Alu 68 310 0 328 295 62 99 chr5 142374745 142375165 -57254985 - L2 LINE L2 -252 3061 2644 249 108 0 0 chr5 142376039 142376076 -57254074 + (TG)n Simple_repeat Simple_repeat 2 38 0 289 93 0 23 chr5 142377397 142377440 -57252710 + MSTC LTR MaLR 12 53 -375 929 189 73 62 chr5 142377484 142377759 -57252391 + L1MD2 LINE L1 6081 6358 -1 747 32 0 0 chr5 142378349 142378443 -57251707 + (TTTTA)n Simple_repeat Simple_repeat 2 95 0 1445 133 81 12 chr5 142378454 142378569 -57251581 - AluSq SINE Alu -48 265 159 2158 141 0 0 chr5 142378569 142378875 -57251275 - AluSc SINE Alu -3 306 1 1445 133 81 12 chr5 142378875 142379007 -57251143 - AluSq SINE Alu -154 159 1 338 289 79 12 chr5 142379022 142379229 -57250921 - MLT1D LTR MaLR -145 360 149 747 263 55 52 chr5 142381608 142381897 -57248253 - MER102b DNA MER1_type -33 308 19 1105 265 125 0 chr5 142383135 142383564 -57246586 - LTR50 LTR ERVL -220 575 1 21 57 0 0 chr5 142383611 142383646 -57246504 + AT_rich Low_complexity Low_complexity 1 35 0 656 275 53 45 chr5 142383885 142384320 -57245830 - MLT1J LTR MaLR -4 507 4 2458 79 3 0 chr5 142384650 142384979 -57245171 - L1PA6 LINE L1 -6 6148 5819 2291 96 23 0 chr5 142385994 142386297 -57243853 - AluSq SINE Alu -3 310 1 1475 145 84 0 chr5 142386312 142386574 -57243576 + L1PA16 LINE L1 5881 6164 -2 572 325 56 9 chr5 142386826 142387057 -57243093 + MIR SINE MIR 11 252 -10 261 83 0 0 chr5 142387153 142387189 -57242961 + (TG)n Simple_repeat Simple_repeat 1 36 0 378 115 0 0 chr5 142387189 142387250 -57242900 + (GA)n Simple_repeat Simple_repeat 2 62 0 439 250 42 7 chr5 142388470 142388614 -57241536 + Charlie4 DNA MER1_type 1813 1961 0 297 0 0 0 chr5 142388973 142389006 -57241144 + (TG)n Simple_repeat Simple_repeat 2 34 0 294 148 26 8 chr5 142391281 142391370 -57238780 + Alu SINE Alu 1 44 -256 1768 123 120 0 chr5 142391423 142391699 -57238451 + AluSx SINE Alu 1 309 -3 28 0 0 0 chr5 142393665 142393693 -57236457 + AT_rich Low_complexity Low_complexity 1 28 0 1079 228 15 100 chr5 142394543 142394942 -57235208 - MLT1A1 LTR MaLR 0 365 1 362 271 97 62 chr5 142394952 142395096 -57235054 - MIR SINE MIR -51 211 63 397 357 59 66 chr5 142395250 142395659 -57234491 - L2 LINE L2 -44 3228 2823 1587 309 177 21 chr5 142395687 142396830 -57233320 - L2 LINE L2 -671 2643 1323 2576 34 0 0 chr5 142396915 142397207 -57232943 + AluY SINE Alu 1 292 -19 304 287 58 22 chr5 142400247 142400367 -57229783 + MIR SINE MIR 33 163 -45 461 291 40 0 chr5 142400477 142400628 -57229522 + MIR SINE MIR 105 261 -1 225 314 49 10 chr5 142401478 142401580 -57228570 - MER102a DNA MER1_type -3 327 222 195 298 0 0 chr5 142402320 142402367 -57227783 + L2 LINE L2 3211 3257 -15 242 320 0 0 chr5 142402789 142402864 -57227286 + MER91B DNA MER1_type 112 186 -4 4586 52 12 2 chr5 142403612 142404185 -57225965 - L1PA5 LINE L1 -2 6152 5574 1813 35 0 0 chr5 142404185 142404415 -57225735 - L1PA5 LINE L1 -990 5156 4927 963 215 178 40 chr5 142404917 142405295 -57224855 - L1ME1 LINE L1 -6 6160 5728 2115 114 23 0 chr5 142405304 142405603 -57224547 - AluSx SINE Alu -6 306 1 2080 82 4 11 chr5 142405710 142405990 -57224160 + AluY SINE Alu 17 294 -17 2586 233 80 38 chr5 142407436 142408203 -57221947 - MER21B LTR ERV1 -57 806 8 399 253 0 0 chr5 142408212 142408291 -57221859 - MER21B LTR ERV1 -773 90 12 24 32 0 0 chr5 142408375 142408406 -57221744 + AT_rich Low_complexity Low_complexity 1 31 0 23 78 0 0 chr5 142408525 142408576 -57221574 + AT_rich Low_complexity Low_complexity 1 51 0 382 267 132 7 chr5 142408717 142408998 -57221152 - HAL1b LINE L1 -247 1101 786 1729 179 3 23 chr5 142409008 142409310 -57220840 - AluJo SINE Alu -16 296 1 363 290 23 0 chr5 142409459 142409590 -57220560 + MER94 DNA DNA 1 134 0 2395 67 0 0 chr5 142410017 142410315 -57219835 + AluY SINE Alu 1 298 -13 214 332 217 30 chr5 142412977 142413378 -57216772 + L2 LINE L2 1527 2002 -1312 194 333 41 41 chr5 142413602 142413725 -57216425 + L2 LINE L2 2266 2388 -926 369 294 42 7 chr5 142414057 142414200 -57215950 - L1MCc LINE L1 -6259 164 17 701 231 195 4 chr5 142414231 142414482 -57215668 - LTR16C LTR ERVL -5 486 188 7260 81 2 6 chr5 142415014 142416797 -57213353 - L1PA7 LINE L1 -1 6153 4364 36 70 0 0 chr5 142417289 142417360 -57212790 + AT_rich Low_complexity Low_complexity 1 71 0 317 351 72 5 chr5 142417497 142417719 -57212431 - Charlie8 DNA MER1_type -2142 275 39 182 345 0 17 chr5 142417933 142417991 -57212159 - L3b LINE CR1 -5 1578 1522 186 233 0 0 chr5 142419684 142419744 -57210406 + T-rich Low_complexity Low_complexity 1 60 0 539 300 69 30 chr5 142421298 142421531 -57208619 - MIR SINE MIR -16 246 5 5809 119 30 0 chr5 142422663 142424185 -57205965 - L1PA15 LINE L1 -2 6163 4627 1940 114 17 23 chr5 142424196 142424495 -57205655 - AluSq SINE Alu -16 297 1 23 33 0 0 chr5 142424626 142424656 -57205494 + AT_rich Low_complexity Low_complexity 1 30 0 544 223 8 8 chr5 142425512 142425642 -57204508 + MLT1E2 LTR MaLR 1 130 -375 902 268 116 16 chr5 142425677 142426047 -57204103 + MLT1E2 LTR MaLR 220 626 0 451 276 35 94 chr5 142427336 142427771 -57202379 - MLT1J1 LTR MaLR -11 435 27 1456 191 52 0 chr5 142428768 142429020 -57201130 + AluJo SINE Alu 30 294 -18 539 273 188 43 chr5 142430850 142431106 -57199044 - L2 LINE L2 -2719 595 303 741 278 0 0 chr5 142431135 142431308 -57198842 + MER45A DNA AcHobo 1 173 -5 587 294 56 69 chr5 142431970 142432361 -57197789 - L1M4 LINE L1 -1250 4896 4511 8440 214 8 7 chr5 142433506 142435567 -57194583 - L1M4 LINE L1 -1906 4240 2178 * 15115 115 51 24 chr5 142435564 142438203 -57191947 - L1PBa LINE L1 -4151 2712 3 223 333 13 0 chr5 142438397 142438472 -57191678 - L2 LINE L2 0 3313 3238 246 32 0 0 chr5 142438792 142438823 -57191327 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4978 164 14 7 chr5 142439150 142439975 -57190175 + MER6 DNA MER2_type 32 862 -3 358 67 0 33 chr5 142440378 142440438 -57189712 + (TG)n Simple_repeat Simple_repeat 1 58 0 1156 213 20 0 chr5 142444222 142444475 -57185675 - L1PA16 LINE L1 -7 6159 5902 180 0 0 0 chr5 142445171 142445191 -57184959 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 570 251 176 40 chr5 142445195 142445422 -57184728 + MIR SINE MIR 4 261 -1 318 231 124 31 chr5 142445463 142445712 -57184438 + MLT1J2 LTR MaLR 67 406 -44 384 280 28 19 chr5 142445880 142445987 -57184163 + L2 LINE L2 3197 3304 -9 1189 276 31 18 chr5 142446469 142446861 -57183289 + LTR16A LTR ERVL 30 426 -24 196 237 153 0 chr5 142448001 142448060 -57182090 - MIR SINE MIR -10 252 185 599 327 33 5 chr5 142448277 142448488 -57181662 + MIR SINE MIR 13 229 -33 1156 221 137 14 chr5 142449697 142450054 -57180096 + LTR40b LTR ERVL 1 401 -61 247 293 36 60 chr5 142450409 142450576 -57179574 - L2 LINE L2 -69 3244 3082 237 139 0 0 chr5 142450664 142450707 -57179443 + (T)n Simple_repeat Simple_repeat 1 43 0 314 374 23 18 chr5 142452685 142452856 -57177294 - MER5B DNA MER1_type 0 178 7 30 0 0 0 chr5 142452971 142453001 -57177149 + AT_rich Low_complexity Low_complexity 1 30 0 783 264 82 26 chr5 142453133 142453364 -57176786 - MLT1I LTR MaLR -19 390 147 712 70 0 0 chr5 142453487 142453573 -57176577 + L1PA5 LINE L1 11 96 -6050 37248 52 5 1 chr5 142453573 142459089 -57171061 + L1PA5 LINE L1 623 6152 -2 1585 173 7 14 chr5 142459108 142459417 -57170733 - AluSx SINE Alu 0 307 1 2695 287 109 29 chr5 142459445 142460040 -57170110 - L2 LINE L2 -12 3301 2755 1751 181 3 13 chr5 142460040 142460350 -57169800 + AluJb SINE Alu 1 307 -5 2695 287 109 29 chr5 142460350 142460903 -57169247 - L2 LINE L2 -558 2755 2007 2008 115 88 15 chr5 142460903 142461242 -57168908 + THE1B LTR MaLR 1 364 0 2695 287 109 29 chr5 142461242 142461522 -57168628 - L2 LINE L2 -1306 2007 1751 1272 197 34 18 chr5 142461544 142461912 -57168238 - L1ME LINE L1 -589 5509 5137 287 170 20 70 chr5 142462121 142462221 -57167929 - L1ME LINE L1 -5932 138 44 2767 181 10 32 chr5 142462506 142463098 -57167052 - L1 LINE L1 -1137 4943 4365 266 261 58 14 chr5 142463194 142463263 -57166887 + MER91C DNA MER1_type 27 98 -42 195 69 0 0 chr5 142463335 142463364 -57166786 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 23 0 0 0 chr5 142466950 142466973 -57163177 + AT_rich Low_complexity Low_complexity 1 23 0 32 82 0 18 chr5 142467124 142467146 -57163004 + AT_rich Low_complexity Low_complexity 1 22 -86 1630 182 0 21 chr5 142467146 142467437 -57162713 + AluJb SINE Alu 1 285 -27 32 82 0 18 chr5 142467437 142467524 -57162626 + AT_rich Low_complexity Low_complexity 22 108 0 22 35 0 0 chr5 142467645 142467674 -57162476 + AT_rich Low_complexity Low_complexity 1 29 0 336 178 0 14 chr5 142468054 142468127 -57162023 - MLT1K LTR MaLR 0 588 517 639 26 0 0 chr5 142468158 142468235 -57161915 + (TTTC)n Simple_repeat Simple_repeat 4 80 0 536 294 174 53 chr5 142468237 142468598 -57161552 - MLT1K LTR MaLR -173 415 11 261 246 0 0 chr5 142469868 142469929 -57160221 - MER33 DNA MER1_type 0 324 264 552 200 65 45 chr5 142469944 142470099 -57160051 - MER33 DNA MER1_type -164 160 3 38 22 0 0 chr5 142471202 142471247 -57158903 + AT_rich Low_complexity Low_complexity 1 45 0 965 157 5 83 chr5 142472980 142473184 -57156966 + LTR18B LTR ERVL 1 188 -426 1142 160 139 64 chr5 142473188 142473469 -57156681 + LTR18B LTR ERVL 313 614 0 332 395 47 57 chr5 142473866 142474481 -57155669 + L1PBb LINE L1 8 616 -6233 233 368 22 30 chr5 142474547 142474778 -57155372 + L1PBb LINE L1 776 1004 -5845 5324 242 41 28 chr5 142474916 142475764 -57154386 + L1PBb LINE L1 1021 1857 -4991 1957 131 7 23 chr5 142475764 142476069 -57154081 + AluSc SINE Alu 1 300 -9 5324 242 41 28 chr5 142476069 142477286 -57152864 + L1PBb LINE L1 1857 3222 -3626 1799 183 111 8 chr5 142477289 142477677 -57152473 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr5 142478018 142478040 -57152110 + AT_rich Low_complexity Low_complexity 1 22 0 218 357 41 71 chr5 142478759 142478955 -57151195 - MIR SINE MIR -56 206 17 1086 293 80 16 chr5 142479105 142479593 -57150557 + LTR33 LTR ERVL 1 519 -2 2323 273 53 48 chr5 142480950 142482474 -57147676 + L1MA9 LINE L1 7 1450 -5718 * 9974 205 32 34 chr5 142482471 142485961 -57144189 + L1MA9 LINE L1 3803 7290 -43 338 315 88 14 chr5 142586662 142586882 -57043268 - L1M4 LINE L1 -3858 2524 2290 2121 74 28 7 chr5 142586924 142587207 -57042943 - AluY SINE Alu -7 304 16 447 319 38 14 chr5 142587210 142587580 -57042570 + L1M2a LINE L1 3372 3750 -3417 379 250 75 12 chr5 142587603 142587763 -57042387 + L1M2a LINE L1 3860 4029 -3138 301 309 69 69 chr5 142587769 142588119 -57042031 + L1M2a LINE L1 4154 4503 -2664 23 0 0 0 chr5 142590743 142590766 -57039384 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 142590780 142590801 -57039349 + AT_rich Low_complexity Low_complexity 1 21 0 545 218 8 8 chr5 142591466 142591590 -57038560 - L1PA16 LINE L1 -284 5882 5759 2116 143 0 0 chr5 142591590 142591883 -57038267 - AluSg SINE Alu -17 293 1 1408 180 36 10 chr5 142591884 142592189 -57037961 - L1 LINE L1 -1093 5053 4741 205 281 50 50 chr5 142592202 142592323 -57037827 + MIR SINE MIR 112 232 -30 234 327 77 24 chr5 142594401 142594569 -57035581 - LTR16A1 LTR ERVL 0 457 281 2214 170 43 17 chr5 142595153 142595570 -57034580 - MSTA LTR MaLR 0 428 1 5591 208 22 25 chr5 142595571 142596964 -57033186 - MST-int LTR MaLR -1 1637 263 256 254 24 56 chr5 142597933 142598059 -57032091 + L1MC/D LINE L1 5699 5820 -1988 209 323 40 57 chr5 142598651 142598775 -57031375 - MER5A DNA MER1_type -25 164 43 * 325 328 15 23 chr5 142598669 142598800 -57031350 + MER5A DNA MER1_type 54 183 -6 3810 208 45 3 chr5 142599266 142600491 -57029659 + L1MB4 LINE L1 4901 6169 -11 1234 204 31 0 chr5 142600672 142600961 -57029189 - L1 LINE L1 -2334 3812 3515 4632 131 63 14 chr5 142600965 142601864 -57028286 - L1MA4A LINE L1 -11 6292 5350 326 233 110 48 chr5 142603864 142604010 -57026140 - MIR SINE MIR -1 261 107 955 24 81 0 chr5 142604133 142604257 -57025893 + L1PA4 LINE L1 6018 6151 -4 423 290 112 23 chr5 142604487 142604674 -57025476 - MER110 LTR ERV1 -93 398 188 1629 152 3 82 chr5 142604674 142605003 -57025147 - AluJo SINE Alu -9 303 1 423 290 112 23 chr5 142605003 142605029 -57025121 - MER110 LTR ERV1 -303 188 166 813 136 8 0 chr5 142606630 142606748 -57023402 + AluSg/x SINE Alu 166 284 -26 25 0 0 0 chr5 142606748 142606773 -57023377 + AT_rich Low_complexity Low_complexity 1 25 0 1026 146 39 0 chr5 142609394 142609572 -57020578 - THE1C LTR MaLR -179 196 12 4226 154 23 63 chr5 142609602 142610548 -57019602 - Tigger3b DNA MER2_type -307 924 17 1250 100 6 0 chr5 142610990 142611170 -57018980 + L1PA13 LINE L1 5979 6159 -4 501 205 84 5 chr5 142611186 142611376 -57018774 + L1 LINE L1 4233 4437 -1709 209 396 43 0 chr5 142611377 142611516 -57018634 + MIR SINE MIR 67 211 -51 793 213 117 35 chr5 142611595 142611970 -57018180 - L1MDa LINE L1 -3986 2554 2149 433 211 26 35 chr5 142611972 142612086 -57018064 - MLT1D LTR MaLR -58 447 335 21 71 0 0 chr5 142612506 142612548 -57017602 + AT_rich Low_complexity Low_complexity 1 42 0 251 295 12 96 chr5 142613761 142613927 -57016223 + MLT1J LTR MaLR 247 398 -113 235 0 28 28 chr5 142614230 142614266 -57015884 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 2368 164 15 18 chr5 142614787 142615243 -57014907 + MER67C LTR ERV1 256 710 0 506 328 59 11 chr5 142615287 142615574 -57014576 + LTR16B LTR ERVL 113 413 -51 21 0 0 0 chr5 142616135 142616156 -57013994 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 142616196 142616222 -57013928 + AT_rich Low_complexity Low_complexity 1 26 0 35 0 0 0 chr5 142616245 142616280 -57013870 + AT_rich Low_complexity Low_complexity 1 35 0 295 343 112 16 chr5 142617474 142617716 -57012434 + L3 LINE CR1 1141 1405 -172 44 56 0 0 chr5 142617716 142617788 -57012362 + AT_rich Low_complexity Low_complexity 1 72 0 3015 199 26 25 chr5 142618476 142619530 -57010620 - L1PA15-16 LINE L1 -3547 3302 2250 877 196 52 0 chr5 142619643 142619837 -57010313 - THE1C LTR MaLR -171 204 1 6687 115 1 1 chr5 142619838 142620817 -57009333 - THE1C-int LTR MaLR -7 1573 595 27 0 0 0 chr5 142621445 142621472 -57008678 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 142621793 142621814 -57008336 + AT_rich Low_complexity Low_complexity 1 21 0 234 128 0 0 chr5 142622364 142622403 -57007747 + (TCCCC)n Simple_repeat Simple_repeat 5 43 0 1015 209 0 15 chr5 142622408 142622604 -57007546 - AluJo SINE Alu -117 195 3 282 29 0 0 chr5 142622777 142622812 -57007338 + (CA)n Simple_repeat Simple_repeat 1 35 0 306 204 167 41 chr5 142624818 142625063 -57005087 + L1M4 LINE L1 2669 2944 -3202 1144 160 21 50 chr5 142625063 142625301 -57004849 - MER46A DNA MER2_type 0 236 6 1416 202 14 3 chr5 142626215 142626502 -57003648 + L1M2 LINE L1 1296 1585 -5264 2381 163 37 2 chr5 142626508 142626918 -57003232 + MSTA LTR MaLR 5 428 0 346 209 0 124 chr5 142626920 142627121 -57003029 + MSTA-int LTR MaLR 2 177 -1474 435 285 0 16 chr5 142628643 142628829 -57001321 + L1M4 LINE L1 4565 4747 -1399 624 200 0 0 chr5 142628861 142628986 -57001164 + L1M4 LINE L1 4735 4859 -1287 261 0 0 0 chr5 142629454 142629483 -57000667 + (TC)n Simple_repeat Simple_repeat 2 30 0 251 237 17 0 chr5 142629522 142629581 -57000569 - HsTC2 DNA Tc2 -2 1896 1837 2027 218 185 28 chr5 142630705 142631484 -56998666 + L1MDa LINE L1 733 1633 -4907 669 231 38 28 chr5 142631497 142631709 -56998441 - MLT1A1 LTR MaLR -2 363 150 186 133 0 0 chr5 142631919 142631949 -56998201 + (A)n Simple_repeat Simple_repeat 1 30 0 291 362 72 22 chr5 142632285 142632561 -56997589 - HERVL40 LTR ERVL -4184 1346 1057 229 301 160 36 chr5 142632924 142633143 -56997007 - LTR40a LTR ERVL -37 482 237 333 223 83 58 chr5 142634351 142634472 -56995678 + MLT1E2 LTR MaLR 16 139 -487 1034 188 0 5 chr5 142634597 142634810 -56995340 - L1 LINE L1 -1509 6056 5845 589 229 11 17 chr5 142634831 142635006 -56995144 - L1 LINE L1 -3248 4317 4144 339 309 33 40 chr5 142635299 142635574 -56994576 - L1 LINE L1 -3604 3961 3689 870 297 56 42 chr5 142635747 142636155 -56993995 + L2 LINE L2 2879 3292 -21 181 289 48 58 chr5 142637483 142637587 -56992563 + MIR SINE MIR 114 216 -46 249 340 30 10 chr5 142638062 142638162 -56991988 - L2 LINE L2 -530 2784 2683 182 153 119 85 chr5 142638181 142638240 -56991910 - L2 LINE L2 -329 2984 2924 1522 234 30 42 chr5 142639075 142639570 -56990580 - L1 LINE L1 -7058 507 19 3050 186 19 9 chr5 142639582 142640320 -56989830 - L1M2 LINE L1 -4523 2326 1582 346 209 12 23 chr5 142640953 142641039 -56989111 + Tigger7 DNA MER2_type 2500 2584 -3 328 279 24 102 chr5 142642457 142642711 -56987439 + L1M3c LINE L1 1365 1598 -4543 1439 189 3 18 chr5 142642994 142643280 -56986870 - AluJb SINE Alu -26 286 5 201 299 0 62 chr5 142643314 142643411 -56986739 + MIR SINE MIR 166 256 -6 4310 111 10 0 chr5 142644175 142644754 -56985396 + THE1B-int LTR MaLR 992 1576 -4 408 161 119 51 chr5 142644758 142644876 -56985274 + THE1B LTR MaLR 1 126 -238 22 0 0 0 chr5 142746810 142746832 -56883318 + AT_rich Low_complexity Low_complexity 1 22 0 1173 240 93 66 chr5 142746911 142747395 -56882755 - MLT1F1 LTR MaLR -42 525 4 22 35 0 0 chr5 142747720 142747749 -56882401 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 142748074 142748102 -56882048 + AT_rich Low_complexity Low_complexity 1 28 0 297 268 24 164 chr5 142749194 142749407 -56880743 - MER91A DNA MER1_type -13 183 1 3998 161 15 18 chr5 142749478 142750121 -56880029 + MER50 LTR ERV1 1 643 -91 2092 124 7 0 chr5 142750121 142750404 -56879746 - AluSc SINE Alu -24 285 1 3998 161 15 18 chr5 142750404 142750473 -56879677 + MER50 LTR ERV1 643 711 -23 1217 209 138 28 chr5 142750486 142750840 -56879310 + MSTD LTR MaLR 4 396 0 22 35 0 0 chr5 142751741 142751770 -56878380 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 142752098 142752121 -56878029 + AT_rich Low_complexity Low_complexity 1 23 0 21 71 0 0 chr5 142752151 142752193 -56877957 + AT_rich Low_complexity Low_complexity 1 42 0 233 349 76 0 chr5 142752335 142752573 -56877577 - L1MC4a LINE L1 -1857 5951 5696 180 361 114 30 chr5 142754342 142754508 -56875642 - L2 LINE L2 -5 3267 3088 249 371 100 28 chr5 142755240 142755531 -56874619 - L2 LINE L2 -345 2969 2658 4476 208 45 7 chr5 142756329 142757296 -56872854 - MER45B DNA AcHobo -23 1017 15 303 313 80 7 chr5 142757313 142757463 -56872687 + LTR16A1 LTR ERVL 296 456 -1 234 333 0 0 chr5 142757850 142757910 -56872240 + MER58B DNA MER1_type 1 60 -281 1257 237 39 54 chr5 142757910 142758319 -56871831 + L1MA9 LINE L1 5871 6273 -39 771 203 68 0 chr5 142758350 142758498 -56871652 + MER58B DNA MER1_type 184 341 0 1899 123 4 0 chr5 142758545 142758814 -56871336 - THE1B LTR MaLR 0 364 95 21 0 0 0 chr5 142759524 142759545 -56870605 + AT_rich Low_complexity Low_complexity 1 21 0 351 215 58 21 chr5 142759595 142759723 -56870427 - MLT1A2 LTR MaLR -3 393 242 397 292 99 21 chr5 142759840 142760073 -56870077 + L1 LINE L1 3027 3277 -2869 252 285 100 59 chr5 142760312 142760615 -56869535 + L1 LINE L1 3952 4268 -1878 1536 219 82 22 chr5 142760836 142761237 -56868913 - MLT1C LTR MaLR -42 425 1 550 244 30 0 chr5 142761237 142761368 -56868782 - MLT1C-int LTR MaLR 0 1371 1237 2848 196 64 73 chr5 142761394 142761931 -56868219 - MLT1C-int LTR MaLR -596 775 246 1438 79 5 10 chr5 142761931 142762133 -56868017 - L1PB1 LINE L1 -2 6149 5949 2848 196 64 73 chr5 142762133 142762377 -56867773 - MLT1C-int LTR MaLR -1125 246 1 811 268 52 17 chr5 142762379 142762670 -56867480 - MLT1C LTR MaLR -2 465 165 383 280 42 0 chr5 142762783 142762901 -56867249 - LTR65 LTR ERV1 -12 657 535 777 162 23 40 chr5 142763127 142763300 -56866850 - LTR65 LTR ERV1 -499 170 1 22 0 0 0 chr5 142764265 142764287 -56865863 + AT_rich Low_complexity Low_complexity 1 22 0 264 122 0 0 chr5 142764556 142764597 -56865553 + (A)n Simple_repeat Simple_repeat 1 41 0 227 207 98 0 chr5 142765097 142765179 -56864971 - L1M4 LINE L1 -3834 2312 2223 1293 119 25 0 chr5 142765301 142765503 -56864647 + L1PA13 LINE L1 5955 6161 -2 261 359 34 8 chr5 142766547 142766664 -56863486 - MIR SINE MIR -96 166 47 2157 149 51 20 chr5 142767601 142768085 -56862065 + MER51B LTR ERV1 1 375 -2 1563 192 17 0 chr5 142768374 142768665 -56861485 - THE1-int LTR MaLR -306 1274 979 1335 248 30 68 chr5 142768668 142769096 -56861054 - MLT2B3 LTR ERVL -142 412 1 1573 249 178 43 chr5 142769096 142769786 -56860364 - MER21B LTR ERV1 -66 797 15 23 0 0 0 chr5 142769930 142769953 -56860197 + AT_rich Low_complexity Low_complexity 1 23 0 200 226 16 0 chr5 142770698 142770760 -56859390 + CT-rich Low_complexity Low_complexity 3 65 0 1239 342 20 2 chr5 142771062 142771501 -56858649 + L1M2 LINE L1 4 450 -6399 324 0 0 0 chr5 142771851 142771887 -56858263 + (GA)n Simple_repeat Simple_repeat 1 36 0 2020 127 0 0 chr5 142771887 142772163 -56857987 - AluSg SINE Alu -34 276 1 320 383 101 7 chr5 142772165 142772314 -56857836 + L1M2 LINE L1 628 790 -6059 1201 248 10 33 chr5 142772327 142772634 -56857516 + L1PA16 LINE L1 447 746 -6103 7027 260 110 40 chr5 142773035 142774521 -56855629 + L1PA16 LINE L1 1419 2800 -4067 363 60 0 0 chr5 142774521 142774571 -56855579 + (CA)n Simple_repeat Simple_repeat 2 51 0 7027 260 110 40 chr5 142774571 142774697 -56855453 + L1PA16 LINE L1 2800 2916 -3951 2228 119 33 25 chr5 142774697 142775058 -56855092 - THE1B LTR MaLR 0 364 1 7027 260 110 40 chr5 142775058 142776839 -56853311 + L1PA16 LINE L1 2916 4571 -2296 8679 45 0 1 chr5 142776839 142778667 -56851483 - L1PA6 LINE L1 -18 6136 4308 7027 260 110 40 chr5 142778667 142779585 -56850565 + L1PA16 LINE L1 4571 6170 -697 422 107 60 24 chr5 142779585 142779649 -56850501 + L1PA15 LINE L1 6076 6162 -3 7027 260 110 40 chr5 142779649 142779670 -56850480 + L1PA16 LINE L1 6170 6188 -679 3572 164 16 15 chr5 142779688 142780360 -56849790 + L1PA16 LINE L1 6179 6851 -18 849 305 142 15 chr5 142780464 142780992 -56849158 + MLT1L LTR MaLR 1 595 -20 788 345 154 36 chr5 142780993 142782084 -56848066 + L2 LINE L2 1901 3138 -175 220 185 15 15 chr5 142782097 142782162 -56847988 + (TA)n Simple_repeat Simple_repeat 1 65 0 180 318 28 56 chr5 142784946 142785053 -56845097 + MIR SINE MIR 32 135 -73 270 298 43 35 chr5 142785393 142785534 -56844616 + MER103 DNA DNA 6 147 -19 205 261 31 46 chr5 142785620 142785654 -56844496 + MIR3 SINE MIR 108 140 -68 231 389 50 7 chr5 142785654 142785793 -56844357 + MIR3 SINE MIR 2 146 -62 624 91 0 0 chr5 142786011 142786099 -56844051 + (TA)n Simple_repeat Simple_repeat 1 88 0 499 161 71 0 chr5 142786099 142786211 -56843939 - L1MA7 LINE L1 -76 6215 6096 808 251 166 11 chr5 142786241 142786676 -56843474 + L1ME3A LINE L1 4372 4873 -1273 1961 262 69 50 chr5 142786698 142787579 -56842571 + L1ME3A LINE L1 5265 6164 -6 36149 98 8 9 chr5 142788234 142794375 -56835775 + L1PA6 LINE L1 11 6141 -13 21 36 0 0 chr5 142794377 142794405 -56835745 + AT_rich Low_complexity Low_complexity 1 28 0 1254 188 24 64 chr5 142794783 142795039 -56835111 + AluJb SINE Alu 16 260 -52 2754 3 0 0 chr5 142795039 142795334 -56834816 + AluYa5 SINE Alu 1 295 -16 1254 188 24 64 chr5 142795334 142795375 -56834775 + AluJb SINE Alu 260 301 -11 183 100 0 0 chr5 142795629 142795659 -56834491 + (CAG)n Simple_repeat Simple_repeat 3 32 0 291 93 0 0 chr5 142796060 142796103 -56834047 + (TG)n Simple_repeat Simple_repeat 2 44 0 3194 32 13 0 chr5 142796330 142796727 -56833423 + L1HS LINE L1 5740 6152 -3 300 138 0 0 chr5 142796729 142796794 -56833356 + (A)n Simple_repeat Simple_repeat 1 65 0 3166 166 29 15 chr5 142796887 142797482 -56832668 - LTR26 LTR ERV1 0 603 1 1262 130 29 0 chr5 142797858 142798065 -56832085 + L1MA1 LINE L1 6087 6299 -3 203 83 83 0 chr5 142798660 142798696 -56831454 + T-rich Low_complexity Low_complexity 3 41 0 2103 8 0 0 chr5 142798699 142798939 -56831211 - L1HS LINE L1 -2 6153 5914 23 54 0 0 chr5 142800327 142800364 -56829786 + AT_rich Low_complexity Low_complexity 1 37 0 27 49 0 0 chr5 142800457 142800498 -56829652 + AT_rich Low_complexity Low_complexity 1 41 0 208 239 22 0 chr5 142800651 142800697 -56829453 + (TGGA)n Simple_repeat Simple_repeat 4 50 0 17355 31 0 0 chr5 142800794 142803654 -56826496 + L1PA3 LINE L1 3292 6155 0 456 316 49 31 chr5 142804757 142804982 -56825168 + MIR SINE MIR 6 234 -28 1134 191 0 52 chr5 142805335 142805602 -56824548 - L1MA9 LINE L1 -25 6287 6035 * 1797 201 106 9 chr5 142805586 142805910 -56824240 + L1MB1 LINE L1 5445 5736 -432 408 40 0 0 chr5 142805910 142805960 -56824190 + (CA)n Simple_repeat Simple_repeat 2 51 0 5424 62 3 0 chr5 142805970 142806658 -56823492 + L1PA5 LINE L1 5462 6151 -3 1797 201 106 9 chr5 142806658 142806755 -56823395 + L1MB1 LINE L1 5744 5919 -249 390 134 35 118 chr5 142806788 142806901 -56823249 + MER61E LTR ERV1 3 150 -462 3557 115 38 9 chr5 142806919 142807475 -56822675 - L1PA7 LINE L1 -2098 4048 3477 9293 93 29 5 chr5 142807475 142809549 -56820601 + L1PA7 LINE L1 4054 6146 -8 1608 187 97 99 chr5 142809618 142810061 -56820089 + MER61E LTR ERV1 85 526 -43 279 394 67 22 chr5 142810228 142810540 -56819610 + L2 LINE L2 2555 2880 -434 233 248 188 20 chr5 142811299 142811400 -56818750 + L2 LINE L2 3154 3271 -1 32 0 0 0 chr5 142812374 142812406 -56817744 + AT_rich Low_complexity Low_complexity 1 32 0 2295 112 0 0 chr5 142813065 142813368 -56816782 + AluSc SINE Alu 1 303 -6 3580 191 30 23 chr5 142814239 142814728 -56815422 + L1MB5 LINE L1 5354 5851 -323 1607 236 34 78 chr5 142814728 142815368 -56814782 + LTR9 LTR ERV1 1 612 0 3580 191 30 23 chr5 142815368 142815658 -56814492 + L1MB5 LINE L1 5851 6138 -36 216 0 0 0 chr5 142815767 142815791 -56814359 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 182 36 0 36 chr5 142816182 142816210 -56813940 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 715 142 0 0 chr5 142816295 142816401 -56813749 + AluY SINE Alu 1 106 -205 288 290 93 0 chr5 142819384 142819491 -56810659 + L2 LINE L2 3192 3308 -5 2184 166 69 59 chr5 142819783 142820290 -56809860 - MER67D LTR ERV1 0 514 3 199 321 210 31 chr5 142820625 142820787 -56809363 + MIR SINE MIR 26 216 -46 258 32 0 0 chr5 142822671 142822702 -56807448 + (TAA)n Simple_repeat Simple_repeat 2 32 0 2613 118 35 35 chr5 142822734 142822887 -56807263 - MER57B LTR ERV1 -9 425 273 1504 207 48 21 chr5 142822887 142823221 -56806929 - MER61A LTR ERV1 0 343 1 2613 118 35 35 chr5 142823221 142823492 -56806658 - MER57B LTR ERV1 -160 274 1 245 374 20 0 chr5 142823547 142823646 -56806504 - MIR SINE MIR -93 169 69 308 323 71 16 chr5 142823740 142823867 -56806283 + L1MEd LINE L1 38 171 -5948 267 329 29 35 chr5 142823941 142824111 -56806039 + L1MEd LINE L1 304 472 -5647 32 0 0 0 chr5 142824188 142824220 -56805930 + AT_rich Low_complexity Low_complexity 1 32 0 549 265 61 91 chr5 142824315 142824867 -56805283 + L1MEd LINE L1 740 1266 -4862 622 244 57 29 chr5 142825269 142825478 -56804672 + MER58C DNA MER1_type 1 215 0 1227 47 0 0 chr5 142825959 142826108 -56804042 - L1PA6 LINE L1 -5 6149 6001 316 222 37 96 chr5 142826126 142826192 -56803958 + L1MEd LINE L1 772 828 -5291 2401 93 3 0 chr5 142826192 142826504 -56803646 - AluSp SINE Alu 0 313 1 316 222 37 96 chr5 142826504 142826572 -56803578 + L1MEd LINE L1 828 898 -5221 181 409 57 0 chr5 142827685 142827773 -56802377 - L2 LINE L2 -35 3237 3145 21 0 0 0 chr5 142827777 142827798 -56802352 + AT_rich Low_complexity Low_complexity 1 21 0 463 256 132 8 chr5 142828306 142828435 -56801715 - LTR16B LTR ERVL -8 456 312 312 45 23 0 chr5 142828757 142828801 -56801349 + MADE1 DNA Mariner 2 46 -34 792 258 61 0 chr5 142830058 142830256 -56799894 - MER68 LTR ERV1 -4 558 349 34 55 0 0 chr5 142830951 142831006 -56799144 + AT_rich Low_complexity Low_complexity 1 55 0 238 354 83 0 chr5 142833808 142833904 -56796246 - L2 LINE L2 -2 3311 3208 1745 145 3 35 chr5 142833912 142834201 -56795949 + AluSg SINE Alu 2 281 -29 1128 134 0 0 chr5 142834202 142834728 -56795422 + (GA)n Simple_repeat Simple_repeat 1 526 0 288 77 0 0 chr5 142834728 142834767 -56795383 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 260 242 10 30 chr5 142834773 142834872 -56795278 - L2 LINE L2 -121 3192 3096 * 1411 313 80 31 chr5 142834854 142835564 -56794586 - L2 LINE L2 -580 2734 1990 21 36 0 0 chr5 142836920 142836948 -56793202 + AT_rich Low_complexity Low_complexity 1 28 0 417 159 0 0 chr5 142838423 142838492 -56791658 + MER68 LTR ERV1 18 86 -476 408 286 194 4 chr5 142838604 142838831 -56791319 - L2 LINE L2 0 3313 3044 269 358 104 0 chr5 142841133 142841267 -56788883 + MER117 DNA MER1_type 3 150 -47 23 0 0 0 chr5 142841671 142841694 -56788456 + AT_rich Low_complexity Low_complexity 1 23 0 14251 188 8 14 chr5 142841913 142845977 -56784173 + L1PB1 LINE L1 2110 6151 0 21 0 0 0 chr5 142846143 142846164 -56783986 + AT_rich Low_complexity Low_complexity 1 21 0 30 27 0 0 chr5 142847732 142847769 -56782381 + AT_rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr5 142847845 142847881 -56782269 + AT_rich Low_complexity Low_complexity 1 36 0 1638 171 42 0 chr5 142848297 142848607 -56781543 - MER34B LTR ERV1 -17 548 226 2952 153 34 8 chr5 142848690 142849185 -56780965 + MER41E LTR ERV1 1 508 -4 1050 185 73 0 chr5 142849198 142849403 -56780747 - MER34B LTR ERV1 -345 220 1 15741 113 5 2 chr5 142849487 142852653 -56777497 - L1PA8 LINE L1 0 6487 3309 10243 145 18 57 chr5 142852657 142853026 -56777124 - L1PA8 LINE L1 -3944 2517 2135 2110 125 3 23 chr5 142853026 142853331 -56776819 + AluSg SINE Alu 1 299 -11 10243 145 18 57 chr5 142853331 142855529 -56774621 - L1PA8 LINE L1 -4326 2135 1 595 134 36 0 chr5 142855842 142855954 -56774196 + L1MA7 LINE L1 6175 6290 -1 22 35 0 0 chr5 142856201 142856230 -56773920 + AT_rich Low_complexity Low_complexity 1 29 0 4031 158 27 7 chr5 142856433 142857130 -56773020 + MER50 LTR ERV1 1 711 -23 1531 171 24 54 chr5 142857131 142857464 -56772686 + MER4D LTR ERV1 581 903 0 206 211 0 53 chr5 142857584 142857641 -56772509 + CT-rich Low_complexity Low_complexity 4 57 0 361 165 0 24 chr5 142858098 142858183 -56771967 + CT-rich Low_complexity Low_complexity 1 83 0 1104 169 0 6 chr5 142858679 142858851 -56771299 + AluSx SINE Alu 1 171 -141 851 205 12 0 chr5 142858855 142859016 -56771134 + MER67D LTR ERV1 243 405 -109 2031 175 15 0 chr5 142859057 142859400 -56770750 + MER7A DNA MER2_type 1 346 0 240 100 0 0 chr5 142859542 142859582 -56770568 + (CA)n Simple_repeat Simple_repeat 2 41 0 294 266 35 70 chr5 142860592 142860735 -56769415 - MIR SINE MIR -105 157 20 252 295 3 38 chr5 142860860 142860946 -56769204 + MIR SINE MIR 69 151 -74 428 311 161 7 chr5 142862948 142863180 -56766970 + L1M4 LINE L1 2110 2305 -3841 2220 112 3 0 chr5 142863180 142863484 -56766666 + AluSx SINE Alu 4 308 -4 428 311 161 7 chr5 142863484 142863666 -56766484 + L1M4 LINE L1 2305 2588 -3558 395 276 87 8 chr5 142864271 142864398 -56765752 + MLT1I LTR MaLR 44 180 -229 557 256 9 71 chr5 142864411 142864622 -56765528 + MER82 DNA MER2_type 7 204 -449 2198 86 0 21 chr5 142864841 142865155 -56764995 + AluSq SINE Alu 9 316 0 1733 185 34 42 chr5 142865261 142865617 -56764533 + MER82 DNA MER2_type 201 553 -100 445 268 8 16 chr5 142865687 142865814 -56764336 + MLT1I LTR MaLR 282 407 -2 26 74 0 0 chr5 142866027 142866081 -56764069 + AT_rich Low_complexity Low_complexity 1 54 0 2801 225 57 4 chr5 142867321 142868018 -56762132 - MER50 LTR ERV1 0 734 1 430 360 82 44 chr5 142869023 142869529 -56760621 - L2 LINE L2 -4 3268 2745 350 252 73 24 chr5 142869810 142869933 -56760217 + LTR67 LTR ERVL 370 498 -59 2509 222 4 45 chr5 142869963 142870521 -56759629 - MLT1F LTR MaLR -5 537 3 231 298 0 0 chr5 142870521 142870572 -56759578 + LTR67 LTR ERVL 504 554 -3 911 329 62 17 chr5 142870576 142871105 -56759045 - L2 LINE L2 -561 2753 2201 2170 123 0 10 chr5 142871222 142871532 -56758618 - AluSg SINE Alu -2 308 2 22 0 0 0 chr5 142872704 142872726 -56757424 + AT_rich Low_complexity Low_complexity 1 22 0 275 339 33 28 chr5 142874676 142874856 -56755294 - MIR SINE MIR 0 262 82 533 290 113 18 chr5 142875871 142876092 -56754058 - MIR SINE MIR 0 262 21 649 172 329 21 chr5 142877807 142878048 -56752102 - MER33 DNA MER1_type -7 356 3 338 333 85 78 chr5 142878735 142879041 -56751109 - L2 LINE L2 0 3272 2965 2340 116 11 11 chr5 142879226 142879581 -56750569 - THE1A LTR MaLR 0 355 1 186 242 0 0 chr5 142879810 142879843 -56750307 - L2 LINE L2 -23 3249 3217 * 373 257 150 7 chr5 142879814 142879954 -56750196 - MIR SINE MIR -21 241 82 664 213 32 21 chr5 142881194 142881382 -56748768 + L1MA8 LINE L1 6102 6291 0 1999 223 72 21 chr5 142881622 142882092 -56748058 + MLT2B2 LTR ERVL 3 496 -19 583 140 202 72 chr5 142882118 142882369 -56747781 - MER4C LTR ERV1 -21 444 153 1132 159 165 45 chr5 142882374 142882683 -56747467 - MER4A LTR ERV1 -318 346 1 270 347 102 0 chr5 142883120 142883218 -56746932 + L2 LINE L2 3148 3255 -17 2214 108 7 0 chr5 142883341 142883662 -56746488 - AluSq SINE Alu 0 313 1 360 306 29 18 chr5 142883835 142884005 -56746145 - L1ME4a LINE L1 -199 5922 5751 424 274 98 12 chr5 142884677 142884841 -56745309 - MIR SINE MIR -1 261 84 444 19 0 0 chr5 142885411 142885464 -56744686 + (CA)n Simple_repeat Simple_repeat 1 53 0 224 200 50 0 chr5 142885568 142885628 -56744522 + (TTCA)n Simple_repeat Simple_repeat 3 65 0 28 61 0 0 chr5 142885834 142885883 -56744267 + AT_rich Low_complexity Low_complexity 1 49 0 493 311 130 42 chr5 142886655 142887102 -56743048 - MLT1J LTR MaLR 0 511 26 1718 131 45 88 chr5 142887104 142887456 -56742694 + MER1B DNA MER1_type 1 337 0 3606 154 18 9 chr5 142887661 142888337 -56741813 + L1MA4 LINE L1 5618 6299 -1 1097 227 35 0 chr5 142890673 142890865 -56739285 + MER58A DNA MER1_type 1 199 -25 2680 201 87 27 chr5 142890865 142891427 -56738723 + MER77 LTR ERV1 3 598 -7 1916 192 134 54 chr5 142891968 142892557 -56737593 - MER92B LTR ERV1 0 636 1 23 33 0 0 chr5 142892948 142892978 -56737172 + AT_rich Low_complexity Low_complexity 1 30 0 228 250 59 79 chr5 142893088 142893240 -56736910 - L2 LINE L2 -12 3301 3153 2178 176 16 3 chr5 142893253 142893627 -56736523 + MLT1B LTR MaLR 1 379 -11 203 297 14 0 chr5 142893773 142893847 -56736303 - L2 LINE L2 -413 2900 2826 2255 125 52 45 chr5 142897150 142897575 -56732575 + MSTA LTR MaLR 1 428 0 8827 186 38 2 chr5 142897575 142899163 -56730987 + MSTA-int LTR MaLR 1 1645 -6 1810 201 105 10 chr5 142899169 142899558 -56730592 + MSTB LTR MaLR 1 426 0 844 235 121 38 chr5 142899638 142900077 -56730073 + MLT1D LTR MaLR 1 467 0 1583 244 160 9 chr5 142901546 142902238 -56727912 - L1ME3A LINE L1 -6 6164 5369 625 230 93 76 chr5 142902497 142902788 -56727362 - LTR48B LTR ERV1 -9 778 383 322 298 16 33 chr5 142902855 142902976 -56727174 - MER34 LTR ERV1 -423 119 1 589 263 58 22 chr5 142902980 142903258 -56726892 - L1ME3A LINE L1 -956 5190 4903 21 0 0 0 chr5 142903996 142904017 -56726133 + AT_rich Low_complexity Low_complexity 1 21 0 1249 268 147 6 chr5 142904983 142905515 -56724635 + L2 LINE L2 2714 3313 0 22 0 0 0 chr5 142906402 142906424 -56723726 + AT_rich Low_complexity Low_complexity 1 22 0 3703 122 12 57 chr5 142906424 142906803 -56723347 - L1PB1 LINE L1 -3 6148 5812 300 111 0 0 chr5 142906803 142906848 -56723302 + (TG)n Simple_repeat Simple_repeat 2 46 0 3703 122 12 57 chr5 142906848 142907149 -56723001 - L1PB1 LINE L1 -339 5812 5499 4239 178 3 21 chr5 142907149 142908222 -56721928 + L1PB1 LINE L1 4442 5490 -661 30 27 0 0 chr5 142908988 142909025 -56721125 + AT_rich Low_complexity Low_complexity 1 37 0 328 181 139 42 chr5 142910519 142910663 -56719487 + MER103 DNA DNA 8 165 -1 620 235 5 115 chr5 142911375 142911575 -56718575 + MIR SINE MIR 69 246 -16 372 356 68 37 chr5 142911586 142911937 -56718213 - L2 LINE L2 -32 3281 2920 1201 310 163 21 chr5 142912353 142913017 -56717133 - L2 LINE L2 -410 2904 2147 1275 209 88 5 chr5 142913076 142913453 -56716697 - Charlie4a DNA MER1_type -10 498 91 468 113 0 0 chr5 142913817 142913888 -56716262 + L1MA3 LINE L1 6228 6298 -7 522 315 98 37 chr5 142913893 142914220 -56715930 + L2 LINE L2 2934 3280 -33 744 289 52 24 chr5 142914985 142915276 -56714874 - L2 LINE L2 0 3313 3015 233 291 220 22 chr5 142915276 142915458 -56714692 + MLT1J1 LTR MaLR 123 340 -106 229 171 85 12 chr5 142915499 142915581 -56714569 + (TATATG)n Simple_repeat Simple_repeat 5 92 0 196 283 75 88 chr5 142915683 142915842 -56714308 - L2 LINE L2 -349 2964 2808 236 239 127 0 chr5 142915887 142915925 -56714225 + MER3 DNA MER1_type 1 47 -162 280 111 0 97 chr5 142915925 142915997 -56714153 - MER3 DNA MER1_type 0 209 145 * 332 194 61 20 chr5 142915949 142916047 -56714103 + MER3 DNA MER1_type 108 209 0 740 345 102 40 chr5 142916054 142916506 -56713644 - L2 LINE L2 -573 2741 2262 420 285 76 56 chr5 142917268 142917635 -56712515 - L1ME4a LINE L1 -282 5839 5469 324 333 55 0 chr5 142917946 142918111 -56712039 - L1ME4a LINE L1 -1089 5057 4884 1602 241 16 75 chr5 142918488 142919036 -56711114 + LTR40a LTR ERVL 2 517 -2 909 309 34 18 chr5 142920359 142920741 -56709409 + HERV16 LTR ERVL 1 388 -4608 665 371 54 15 chr5 142920773 142921505 -56708645 + MERVL LTR ERVL 3024 3838 -1926 258 310 75 11 chr5 142922693 142922867 -56707283 - L1ME LINE L1 -334 5787 5603 327 277 48 0 chr5 142923408 142923491 -56706659 + L2 LINE L2 3184 3270 -2 253 333 0 0 chr5 142923605 142923683 -56706467 + HAL1 LINE L1 4 81 -2426 1984 286 110 29 chr5 142924917 142925908 -56704242 + L1MCc LINE L1 350 1420 -5003 430 273 52 21 chr5 142926052 142926246 -56703904 + HAL1 LINE L1 1398 1597 -910 419 205 0 24 chr5 142926270 142926353 -56703797 + L1M3e LINE L1 1 81 -6949 2494 37 0 0 chr5 142927349 142927648 -56702502 + L1PA4 LINE L1 5854 6152 -3 461 302 135 16 chr5 142927752 142927997 -56702153 - MLT1I LTR MaLR -23 386 113 1596 145 22 65 chr5 142928350 142928674 -56701476 - L1PA15 LINE L1 -9 6156 5847 296 303 167 0 chr5 142929684 142929816 -56700334 + MIR SINE MIR 79 232 -30 2569 270 62 26 chr5 142930170 142930947 -56699203 + MER21B LTR ERV1 1 805 -58 190 176 39 0 chr5 142931494 142931545 -56698605 + L3b LINE CR1 1171 1223 -360 4741 94 24 9 chr5 142931573 142931739 -56698411 - L1P3 LINE L1 -673 5481 5319 2146 116 0 3 chr5 142931739 142932031 -56698119 - AluSg SINE Alu -19 291 1 4741 94 24 9 chr5 142932031 142932665 -56697485 - L1P3 LINE L1 -835 5319 4668 4965 62 29 0 chr5 142932665 142933322 -56696828 + L1PA7 LINE L1 5479 6154 0 372 302 183 38 chr5 142933398 142933835 -56696315 + MLT1H LTR MaLR 5 549 0 200 363 53 9 chr5 142934142 142934255 -56695895 + MIR3 SINE MIR 90 207 -1 25529 142 20 20 chr5 142935620 142941190 -56688960 - L1PA8A LINE L1 -4 6442 817 203 286 61 0 chr5 142941505 142941554 -56688596 - L2 LINE L2 -82 3190 3139 238 250 19 0 chr5 142941728 142941780 -56688370 + L2 LINE L2 3209 3261 -11 24 0 0 0 chr5 142942750 142942774 -56687376 + AT_rich Low_complexity Low_complexity 1 24 0 336 148 0 0 chr5 142943449 142943510 -56686640 + (CA)n Simple_repeat Simple_repeat 2 62 0 290 256 54 31 chr5 142943983 142944112 -56686038 + MER112 DNA MER1_type 119 250 -10 206 296 132 31 chr5 142944200 142944359 -56685791 - MIR SINE MIR -60 202 28 492 268 12 77 chr5 142945013 142945181 -56684969 + MLT1F1 LTR MaLR 5 161 -406 215 73 49 0 chr5 142945203 142945244 -56684906 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 756 337 94 14 chr5 142945450 142945863 -56684287 - LTR16C LTR ERVL -14 477 32 4604 145 16 6 chr5 142950156 142950956 -56679194 - L1PA16 LINE L1 -2 6164 5357 4301 132 12 6 chr5 142950957 142951675 -56678475 - L1PB1 LINE L1 0 6151 5429 1775 205 44 24 chr5 142952154 142952607 -56677543 - MLT1C LTR MaLR 0 467 6 1976 136 0 10 chr5 142952857 142953151 -56676999 + AluSx SINE Alu 1 291 -21 653 325 43 12 chr5 142953205 142953550 -56676600 + HERV16 LTR ERVL 960 1315 -3681 1518 312 65 53 chr5 142953838 142953893 -56676257 + HERV16 LTR ERVL 1701 1754 -3242 765 178 0 22 chr5 142953893 142954028 -56676122 - FLAM_C SINE Alu -1 132 1 1518 312 65 53 chr5 142954028 142954131 -56676019 + HERV16 LTR ERVL 1754 1854 -3142 1538 193 0 15 chr5 142954131 142954401 -56675749 - AluJo SINE Alu -25 287 22 1518 312 65 53 chr5 142954401 142955234 -56674916 + HERV16 LTR ERVL 1854 2704 -2292 414 269 53 79 chr5 142955336 142955563 -56674587 + HERV16 LTR ERVL 2859 3079 -1917 192 286 71 14 chr5 142956451 142956521 -56673629 - L2 LINE L2 -36 3236 3163 418 308 48 0 chr5 142957623 142957769 -56672381 - MIR SINE MIR -21 241 89 1976 223 61 24 chr5 142957874 142958494 -56671656 + L1ME1 LINE L1 5283 5925 -241 2368 54 47 0 chr5 142958895 142959191 -56670959 - AluY SINE Alu -1 310 1 341 243 0 81 chr5 142961108 142961256 -56668894 - MER103 DNA DNA -16 150 15 758 296 137 27 chr5 142961726 142962128 -56668022 - LTR16B LTR ERVL -2 462 17 366 331 95 22 chr5 142962189 142962506 -56667644 + L1ME4a LINE L1 5782 6121 0 205 286 117 13 chr5 142962776 142962853 -56667297 + L2 LINE L2 1199 1283 -2031 460 231 124 6 chr5 142962872 142963041 -56667109 - MER112 DNA MER1_type 0 260 72 234 0 0 0 chr5 142963058 142963084 -56667066 + (TG)n Simple_repeat Simple_repeat 2 27 0 2576 278 104 66 chr5 142963148 142964643 -56665507 + L2 LINE L2 1298 2848 -466 255 61 0 0 chr5 142964652 142964685 -56665465 + (TG)n Simple_repeat Simple_repeat 2 34 0 5053 79 27 0 chr5 142964698 142965395 -56664755 - HERVK9 LTR ERVK -418 5498 4783 * 6328 63 0 0 chr5 142965392 142966216 -56663934 - HERVK9 LTR ERVK -1381 4535 3712 11856 57 1 1 chr5 142966217 142967745 -56662405 - HERVK9 LTR ERVK -3130 2786 1259 4392 69 5 10 chr5 142967737 142968332 -56661818 - HERVK9 LTR ERVK -5324 592 1 * 3296 102 51 10 chr5 142968332 142968823 -56661327 - MER9 LTR ERVK 0 511 1 302 198 64 32 chr5 142968826 142968983 -56661167 + (TA)n Simple_repeat Simple_repeat 2 163 0 208 167 0 24 chr5 142969102 142969144 -56661006 + CT-rich Low_complexity Low_complexity 1 41 0 258 81 0 0 chr5 142970293 142970330 -56659820 + (TG)n Simple_repeat Simple_repeat 1 37 0 11648 191 94 16 chr5 142970903 142976545 -56653605 - L1PBa LINE L1 -743 6119 33 5010 215 22 3 chr5 142976549 142977799 -56652351 - L1 LINE L1 -779 5367 4094 29026 94 9 5 chr5 142977799 142982986 -56647164 + L1PA8 LINE L1 971 6172 0 1031 184 63 0 chr5 142983070 142983277 -56646873 + MER34B LTR ERV1 1 220 -345 2931 153 34 8 chr5 142983290 142983785 -56646365 - MER41E LTR ERV1 -4 508 1 1538 171 42 0 chr5 142983868 142984178 -56645972 + MER34B LTR ERV1 226 548 -17 22 56 0 0 chr5 142984596 142984632 -56645518 + AT_rich Low_complexity Low_complexity 1 36 0 30 27 0 0 chr5 142984708 142984745 -56645405 + AT_rich Low_complexity Low_complexity 1 37 0 23 68 0 0 chr5 142986313 142986357 -56643793 + AT_rich Low_complexity Low_complexity 1 44 0 5514 160 7 21 chr5 142986498 142988602 -56641548 - L1PB1 LINE L1 0 6151 4075 187 197 0 42 chr5 143089873 143089944 -56540206 + A-rich Low_complexity Low_complexity 2 69 0 1067 285 68 25 chr5 143091662 143092174 -56537976 - L1MCc LINE L1 -5865 558 25 201 116 23 23 chr5 143092487 143092530 -56537620 + T-rich Low_complexity Low_complexity 2 44 0 2811 194 50 41 chr5 143092680 143093357 -56536793 - L1MA10 LINE L1 -7 6327 5645 2140 203 28 8 chr5 143093357 143093756 -56536394 + Tigger7 DNA MER2_type 1 407 -2080 409 213 13 0 chr5 143093777 143093852 -56536298 + Tigger7 DNA MER2_type 2411 2486 -1 406 182 12 2 chr5 143093852 143093936 -56536214 - L1M4 LINE L1 -531 5647 5560 * 1236 239 32 50 chr5 143093933 143094000 -56536150 - L1M3a LINE L1 -4785 1170 1103 2208 95 0 0 chr5 143094000 143094315 -56535835 - AluSq SINE Alu 0 315 1 1236 239 32 50 chr5 143094315 143094601 -56535549 - L1M3a LINE L1 -4852 1103 823 1747 136 25 11 chr5 143094601 143094915 -56535235 - AluSx SINE Alu 0 312 1 1236 239 32 50 chr5 143094915 143094999 -56535151 - L1M3a LINE L1 -5132 823 739 679 291 140 25 chr5 143095139 143095497 -56534653 - L2 LINE L2 -434 2880 2482 29 84 0 0 chr5 143097780 143097851 -56532299 + AT_rich Low_complexity Low_complexity 1 71 0 186 189 0 0 chr5 143098328 143098365 -56531785 + (TA)n Simple_repeat Simple_repeat 1 37 0 315 286 54 73 chr5 143098401 143098660 -56531490 + L1ME LINE L1 5521 5774 -347 254 177 32 0 chr5 143098846 143098908 -56531242 - MLT1E1 LTR MaLR -3 651 588 4105 111 3 50 chr5 143098909 143099594 -56530556 - L1PA13 LINE L1 -1 6162 5510 21 36 0 0 chr5 143099877 143099905 -56530245 + AT_rich Low_complexity Low_complexity 1 28 0 246 172 49 25 chr5 143101693 143101864 -56528286 + (TA)n Simple_repeat Simple_repeat 1 175 0 2153 74 46 3 chr5 143101864 143102149 -56528001 - AluY SINE Alu -14 297 1 333 0 0 0 chr5 143102510 143102547 -56527603 + (CA)n Simple_repeat Simple_repeat 2 38 0 315 0 0 0 chr5 143102546 143102581 -56527569 + (GA)n Simple_repeat Simple_repeat 2 36 0 * 352 330 85 44 chr5 143103064 143103521 -56526629 - L1 LINE L1 -2010 4136 3661 447 269 211 6 chr5 143103535 143103720 -56526430 + MLT1H1 LTR MaLR 319 555 0 340 256 117 29 chr5 143104367 143104504 -56525646 + L1M4 LINE L1 2368 2516 -3630 773 85 0 9 chr5 143104551 143104657 -56525493 - L1P LINE L1 -877 5269 5165 2002 75 10 52 chr5 143104657 143104959 -56525191 + L1PA7 LINE L1 5858 6152 -2 321 161 127 4 chr5 143105063 143105201 -56524949 + MER20 DNA MER1_type 7 202 -17 293 238 0 12 chr5 143105226 143105310 -56524840 + (TA)n Simple_repeat Simple_repeat 2 84 0 1798 166 66 18 chr5 143106345 143106677 -56523473 + MLT1B LTR MaLR 32 379 -11 38 22 0 0 chr5 143109756 143109801 -56520349 + AT_rich Low_complexity Low_complexity 1 45 0 2349 266 59 18 chr5 143109846 143110905 -56519245 - L1ME1 LINE L1 -4 6162 5148 4019 107 2 12 chr5 143110905 143111502 -56518648 + L1PB1 LINE L1 5561 6151 0 2349 266 59 18 chr5 143111502 143111551 -56518599 - L1ME1 LINE L1 -1018 5148 5102 333 47 0 0 chr5 143111551 143111594 -56518556 + (CA)n Simple_repeat Simple_repeat 2 44 0 183 176 29 15 chr5 143112078 143112146 -56518004 + GA-rich Low_complexity Low_complexity 2 70 0 722 230 117 50 chr5 143112277 143112738 -56517412 - L1ME1 LINE L1 -1603 4543 4052 4296 170 45 25 chr5 143112777 143112966 -56517184 - L1MA8 LINE L1 -4 6287 6103 1675 151 59 0 chr5 143112966 143113238 -56516912 - AluSx SINE Alu -14 298 11 4296 170 45 25 chr5 143113238 143113989 -56516161 - L1MA8 LINE L1 -188 6103 5329 1048 258 101 29 chr5 143113981 143114447 -56515703 - L1ME1 LINE L1 -2126 4020 3589 * 1572 190 32 62 chr5 143114447 143114847 -56515303 - MLT1B LTR MaLR -1 389 2 1048 258 101 29 chr5 143114847 143115445 -56514705 - L1ME1 LINE L1 -2557 3589 2720 868 243 30 43 chr5 143115460 143115760 -56514390 + Charlie2a DNA MER1_type 1529 1824 -1038 24 32 0 0 chr5 143115808 143115839 -56514311 + AT_rich Low_complexity Low_complexity 1 31 0 599 250 7 14 chr5 143115913 143116057 -56514093 - FLAM_C SINE Alu 0 143 1 27 81 0 0 chr5 143116106 143116168 -56513982 + AT_rich Low_complexity Low_complexity 1 62 0 21 100 0 0 chr5 143116649 143116719 -56513431 + AT_rich Low_complexity Low_complexity 1 70 0 1226 67 0 6 chr5 143116991 143117155 -56512995 - L1PA10 LINE L1 -3 6165 6003 31 26 0 0 chr5 143118539 143118577 -56511573 + AT_rich Low_complexity Low_complexity 1 38 0 1459 181 3 91 chr5 143118928 143119075 -56511075 + AluJb SINE Alu 1 107 -205 207 0 0 0 chr5 143119075 143119098 -56511052 + (CA)n Simple_repeat Simple_repeat 2 24 0 1459 181 3 91 chr5 143119098 143119270 -56510880 + AluJb SINE Alu 107 292 -20 4263 175 16 16 chr5 143120352 143121220 -56508930 - L1MA7 LINE L1 -3 6288 5421 209 283 83 0 chr5 143121653 143121713 -56508437 + L2 LINE L2 3200 3264 -8 24 53 0 0 chr5 143123310 143123348 -56506802 + AT_rich Low_complexity Low_complexity 1 38 0 608 292 122 52 chr5 143123531 143124113 -56506037 + L1M4 LINE L1 3122 3744 -2402 25 31 0 0 chr5 143125882 143125914 -56504236 + AT_rich Low_complexity Low_complexity 1 32 0 774 264 47 13 chr5 143126685 143126920 -56503230 - MLT1H LTR MaLR -306 243 1 653 277 132 24 chr5 143127125 143127480 -56502670 + L1MDb LINE L1 909 1301 -5239 2195 126 2 86 chr5 143127480 143127877 -56502273 - THE1B LTR MaLR 0 364 1 653 277 132 24 chr5 143127877 143128067 -56502083 + L1MDb LINE L1 1301 1469 -5071 * 9205 193 27 12 chr5 143128042 143130144 -56500006 + L1MA8 LINE L1 3502 5633 -907 2909 185 36 19 chr5 143130299 143130694 -56499456 + L1MA8 LINE L1 5651 6066 -619 1648 143 0 37 chr5 143130694 143130994 -56499156 + AluJb SINE Alu 24 313 0 2909 185 36 19 chr5 143130994 143131239 -56498911 + L1MA8 LINE L1 6066 6305 -380 899 70 0 0 chr5 143131239 143131354 -56498796 + AluSp/q SINE Alu 175 289 -24 1460 198 72 6 chr5 143131363 143131726 -56498424 + L1MA8 LINE L1 6298 6684 -1 21 0 0 0 chr5 143131730 143131751 -56498399 + AT_rich Low_complexity Low_complexity 1 21 0 1053 254 53 48 chr5 143131830 143132726 -56497424 + L1MDb LINE L1 1817 2793 -3747 424 270 72 7 chr5 143133122 143133274 -56496876 + L1MDb LINE L1 2646 2807 -3914 3884 228 32 37 chr5 143133649 143134558 -56495592 - L1 LINE L1 -1853 4293 3389 2188 125 0 3 chr5 143134558 143134869 -56495281 - AluSx SINE Alu -2 310 1 3884 228 32 37 chr5 143134869 143135106 -56495044 - L1 LINE L1 -2757 3389 3152 600 239 11 11 chr5 143135098 143135278 -56494872 + L1 LINE L1 4290 4469 -1677 * 2143 124 0 0 chr5 143135290 143135588 -56494562 + AluSx SINE Alu 1 298 -14 2109 131 0 0 chr5 143136426 143136724 -56493426 + AluSg1 SINE Alu 1 298 -11 2257 105 0 13 chr5 143136826 143137139 -56493011 + AluSg SINE Alu 1 309 -1 255 327 64 27 chr5 143137934 143138154 -56491996 - L1ME LINE L1 -502 5662 5435 2086 121 3 0 chr5 143138163 143138452 -56491698 - AluSx SINE Alu -20 292 3 29 70 0 0 chr5 143138463 143138520 -56491630 + AT_rich Low_complexity Low_complexity 1 57 0 2438 81 0 0 chr5 143138558 143138868 -56491282 - AluY SINE Alu -1 310 1 627 154 12 173 chr5 143139616 143139860 -56490290 - MLT2D LTR ERVL 0 454 232 581 311 0 12 chr5 143139860 143140021 -56490129 + L1PA13 LINE L1 9 167 -6620 382 244 110 46 chr5 143140230 143140493 -56489657 - MLT1E LTR MaLR -329 264 2 27 0 0 0 chr5 143140891 143140918 -56489232 + AT_rich Low_complexity Low_complexity 1 27 0 319 281 114 0 chr5 143141415 143141529 -56488621 - L2 LINE L2 -952 2362 2236 262 310 244 28 chr5 143141980 143142193 -56487957 + MIR SINE MIR 2 260 -2 193 341 171 42 chr5 143143475 143143926 -56486224 + L2 LINE L2 2805 3313 0 226 333 13 0 chr5 143144340 143144418 -56485732 - MER2 DNA MER2_type 0 345 267 21 36 0 0 chr5 143144432 143144460 -56485690 + AT_rich Low_complexity Low_complexity 1 28 0 1515 199 3 16 chr5 143144467 143144773 -56485377 - AluJo SINE Alu -10 302 1 1348 126 5 5 chr5 143144773 143144972 -56485178 - MER2 DNA MER2_type -146 199 1 490 160 0 0 chr5 143145320 143145414 -56484736 - AluSg/x SINE Alu -2 308 215 2803 185 21 2 chr5 143146445 143146974 -56483176 - MER67C LTR ERV1 -6 704 166 216 241 11 46 chr5 143147935 143148022 -56482128 + GA-rich Low_complexity Low_complexity 2 85 0 1242 244 18 47 chr5 143148126 143148507 -56481643 + MLT1A2 LTR MaLR 5 374 0 385 305 35 45 chr5 143149644 143149844 -56480306 - MLT1K LTR MaLR 0 588 391 675 200 13 42 chr5 143152417 143152479 -56477671 - MLT1A1 LTR MaLR 0 467 405 225 0 0 0 chr5 143152479 143152504 -56477646 + (TTAA)n Simple_repeat Simple_repeat 3 27 0 1972 134 0 0 chr5 143152504 143152787 -56477363 - AluSc SINE Alu -26 283 1 675 200 13 42 chr5 143152787 143152889 -56477261 - MLT1A1 LTR MaLR -60 407 204 410 189 0 0 chr5 143152892 143152966 -56477184 - MLT1A1 LTR MaLR -300 74 1 325 147 12 92 chr5 143153228 143153391 -56476759 + (TTATA)n Simple_repeat Simple_repeat 5 154 0 591 304 114 53 chr5 143153566 143154109 -56476041 + L1MC4 LINE L1 71 646 -5750 * 1810 59 4 4 chr5 143154099 143154424 -56475726 + L1PA3 LINE L1 5898 6222 0 1617 290 63 30 chr5 143154434 143155521 -56474629 + L1MC4 LINE L1 646 1768 -4628 292 200 0 8 chr5 143155627 143155710 -56474440 - L1MDa LINE L1 -4924 1514 1458 362 185 37 9 chr5 143155806 143155914 -56474236 + MER96B DNA MER1_type? 241 351 -66 2785 40 31 3 chr5 143157078 143157429 -56472721 - L1PA5 LINE L1 0 6154 5794 6426 42 4 1 chr5 143157429 143158638 -56471512 + L1PA5 LINE L1 4593 5805 -349 254 238 0 59 chr5 143158637 143158738 -56471412 - L1MDa LINE L1 -4966 1574 1480 * 379 239 34 8 chr5 143159085 143159202 -56470948 + L1MC4 LINE L1 2364 2483 -3732 353 215 85 62 chr5 143159225 143159355 -56470795 + MLT1C LTR MaLR 5 137 -330 544 291 71 7 chr5 143159379 143159674 -56470476 + L1MC4 LINE L1 2483 2796 -3419 799 226 62 70 chr5 143159692 143159972 -56470178 + L1MC5 LINE L1 7020 7298 -663 932 202 63 140 chr5 143159972 143160323 -56469827 + MLT1C LTR MaLR 1 303 -164 2139 113 0 3 chr5 143160323 143160625 -56469525 + AluSg SINE Alu 1 301 -9 932 202 63 140 chr5 143160625 143160779 -56469371 + MLT1C LTR MaLR 303 467 0 799 226 62 70 chr5 143160779 143160900 -56469250 + L1MC5 LINE L1 7298 7418 -543 342 274 128 68 chr5 143161197 143161493 -56468657 + L1MC4 LINE L1 4179 4492 -1723 327 326 85 15 chr5 143161620 143161951 -56468199 + L1MC4 LINE L1 4823 5176 -1039 471 251 31 11 chr5 143162123 143162314 -56467836 + L1MC4 LINE L1 5366 5560 -2317 232 350 61 0 chr5 143162396 143162559 -56467591 + HsTC2 DNA Tc2 45 217 -1681 408 264 52 26 chr5 143162565 143162720 -56467430 + HsTC2 DNA Tc2 502 660 -1238 388 294 45 73 chr5 143162752 143162816 -56467334 + HsTC2 DNA Tc2 1297 1361 -537 2116 138 3 3 chr5 143162816 143163128 -56467022 + AluSx SINE Alu 1 312 0 388 294 45 73 chr5 143163128 143163376 -56466774 + HsTC2 DNA Tc2 1361 1776 -122 24 32 0 0 chr5 143163549 143163580 -56466570 + AT_rich Low_complexity Low_complexity 1 31 0 603 254 54 138 chr5 143163604 143164186 -56465964 + L1MC4 LINE L1 6708 7223 -807 420 303 74 32 chr5 143164517 143164896 -56465254 + L1MC5 LINE L1 7449 7843 -187 2075 112 0 7 chr5 143164949 143165268 -56464882 + AluSx SINE Alu 1 317 0 1795 178 7 0 chr5 143167578 143167876 -56462274 + AluJb SINE Alu 1 300 -12 2088 122 0 0 chr5 143168225 143168521 -56461629 - AluSx SINE Alu -16 296 1 391 274 52 30 chr5 143169824 143169959 -56460191 - L2 LINE L2 -18 3295 3158 2434 57 3 0 chr5 143170179 143170480 -56459670 + AluY SINE Alu 1 302 -9 1005 306 71 11 chr5 143171433 143171799 -56458351 + LTR16A LTR ERVL 57 444 -6 24 0 0 0 chr5 143172734 143172758 -56457392 + AT_rich Low_complexity Low_complexity 1 24 0 18183 173 46 33 chr5 143172758 143175996 -56454154 - L1MA2 LINE L1 0 7723 4531 2182 69 3 26 chr5 143175996 143176300 -56453850 - L1PA7 LINE L1 0 6154 5858 18183 173 46 33 chr5 143176300 143176888 -56453262 - L1MA2 LINE L1 -3192 4531 3953 405 0 0 0 chr5 143176888 143176933 -56453217 + (TA)n Simple_repeat Simple_repeat 2 46 0 18183 173 46 33 chr5 143176933 143178934 -56451216 - L1MA2 LINE L1 -3770 3953 1767 285 29 0 0 chr5 143178934 143178968 -56451182 + (TC)n Simple_repeat Simple_repeat 1 34 0 18183 173 46 33 chr5 143178968 143180742 -56449408 - L1MA2 LINE L1 -5956 1767 19 427 160 0 0 chr5 143181945 143182020 -56448130 + L1PB4 LINE L1 6082 6156 0 387 133 19 143 chr5 143182335 143182371 -56447779 - L1MA3 LINE L1 -11 6294 6255 207 0 0 0 chr5 143182371 143182394 -56447756 + (CA)n Simple_repeat Simple_repeat 2 24 0 387 133 19 143 chr5 143182394 143182462 -56447688 - L1MA3 LINE L1 -50 6255 6203 5508 177 19 1 chr5 143182585 143184134 -56446016 - L1MA3 LINE L1 -92 6213 4639 206 167 21 0 chr5 143184308 143184356 -56445794 + (TA)n Simple_repeat Simple_repeat 1 49 0 1651 201 0 10 chr5 143184356 143184645 -56445505 - AluJb SINE Alu -26 286 1 2142 170 73 2 chr5 143184833 143185228 -56444922 - MSTA LTR MaLR -5 423 1 1515 144 24 105 chr5 143185597 143185931 -56444219 - AluYb8 SINE Alu -11 307 1 9292 174 17 5 chr5 143185936 143188676 -56441474 + L1MA1 LINE L1 3499 6302 0 2241 163 184 78 chr5 143188694 143188897 -56441253 + L1MA4 LINE L1 4909 5089 -1211 1687 125 38 11 chr5 143188897 143189005 -56441145 + AluSg SINE Alu 18 122 -188 288 0 0 0 chr5 143189005 143189037 -56441113 + (CAA)n Simple_repeat Simple_repeat 1 32 0 1687 125 38 11 chr5 143189037 143189192 -56440958 + AluSg SINE Alu 122 288 -22 2241 163 184 78 chr5 143189192 143190046 -56440104 + L1MA4 LINE L1 5089 6068 -232 3341 96 4 6 chr5 143190075 143190553 -56439597 - L1PA13 LINE L1 0 6163 5687 892 158 25 5 chr5 143190594 143190790 -56439360 + L1MA4A LINE L1 6097 6296 -7 774 223 35 69 chr5 143191037 143191297 -56438853 - MLT1A1 LTR MaLR -114 251 1 780 179 13 0 chr5 143191883 143192039 -56438111 - L1MA4 LINE L1 -3 6297 6140 3714 178 29 14 chr5 143193137 143193692 -56436458 - L1 LINE L1 -1899 4247 3677 231 36 0 0 chr5 143193692 143193720 -56436430 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 3714 178 29 14 chr5 143193720 143193899 -56436251 - L1 LINE L1 -2469 3677 3502 22 0 0 0 chr5 143194812 143194834 -56435316 + AT_rich Low_complexity Low_complexity 1 22 0 290 314 0 71 chr5 143194912 143195052 -56435098 - MIR SINE MIR -15 247 118 2004 174 55 19 chr5 143195053 143195468 -56434682 - MSTB1 LTR MaLR 0 432 3 2383 183 26 9 chr5 143195478 143195943 -56434207 - L1MB1 LINE L1 -334 5834 5362 1855 148 36 0 chr5 143195943 143196271 -56433879 + L1MB1 LINE L1 5827 6168 0 331 82 16 16 chr5 143196820 143196881 -56433269 + (TTTTA)n Simple_repeat Simple_repeat 1 61 0 421 57 0 0 chr5 143196897 143196950 -56433200 + L1PA4 LINE L1 6038 6090 -65 4619 53 3 5 chr5 143197109 143197709 -56432441 - L1PA4 LINE L1 -1359 4787 4189 7524 31 0 1 chr5 143197709 143199087 -56431063 + L1PA4 LINE L1 4776 6152 -3 26 0 0 0 chr5 143199087 143199113 -56431037 + AT_rich Low_complexity Low_complexity 1 26 0 6136 141 13 34 chr5 143199113 143200234 -56429916 + THE1B-int LTR MaLR 483 1580 0 1964 152 76 15 chr5 143200234 143200577 -56429573 + THE1B LTR MaLR 1 364 0 23 54 0 0 chr5 143201120 143201157 -56428993 + AT_rich Low_complexity Low_complexity 1 37 0 492 296 97 15 chr5 143201404 143201600 -56428550 + MIR SINE MIR 44 255 -7 25 0 0 0 chr5 143201624 143201649 -56428501 + AT_rich Low_complexity Low_complexity 1 25 0 22 56 0 0 chr5 143201737 143201773 -56428377 + AT_rich Low_complexity Low_complexity 1 36 0 244 401 83 20 chr5 143202001 143202400 -56427750 + L2 LINE L2 2553 2976 -338 362 308 132 16 chr5 143202599 143202781 -56427369 + L2 LINE L2 1915 2117 -1197 285 75 0 0 chr5 143202860 143202900 -56427250 + (CA)n Simple_repeat Simple_repeat 2 41 0 263 210 0 16 chr5 143202923 143202985 -56427165 - L1MC4 LINE L1 -1329 6713 6653 1302 313 96 51 chr5 143202986 143204030 -56426120 + L2 LINE L2 2215 3313 0 23 0 0 0 chr5 143204056 143204079 -56426071 + AT_rich Low_complexity Low_complexity 1 23 0 383 312 67 23 chr5 143204881 143205338 -56424812 + L1M4 LINE L1 1260 1879 -4832 396 293 93 39 chr5 143205363 143205568 -56424582 + L1M4 LINE L1 2005 2220 -4605 277 57 0 0 chr5 143205915 143205950 -56424200 + U2 snRNA snRNA 1 35 -153 483 283 72 51 chr5 143205992 143206222 -56423928 + L1M4 LINE L1 2707 2931 -3713 2903 6 0 0 chr5 143206222 143206540 -56423610 + AluYb8 SINE Alu 1 318 0 483 283 72 51 chr5 143206540 143206869 -56423281 + L1M4 LINE L1 2931 3327 -3317 2239 84 31 52 chr5 143207053 143207244 -56422906 + L1MA1 LINE L1 5928 6121 -181 2080 134 0 0 chr5 143207244 143207542 -56422608 - AluSx SINE Alu -14 298 1 2239 84 31 52 chr5 143207542 143207701 -56422449 + L1MA1 LINE L1 6121 6272 -30 2157 112 41 44 chr5 143207701 143208066 -56422084 + THE1B LTR MaLR 1 364 0 2239 84 31 52 chr5 143208066 143208095 -56422055 + L1MA1 LINE L1 6272 6300 -2 1164 273 85 42 chr5 143208981 143209619 -56420531 + L1MDb LINE L1 757 1421 -4988 1447 237 28 47 chr5 143209653 143210121 -56420029 + LTR40b LTR ERVL 4 462 0 410 303 99 6 chr5 143210407 143210569 -56419581 + HERVL40 LTR ERVL 924 1100 -4430 884 308 36 31 chr5 143210608 143210995 -56419155 + HERVL40 LTR ERVL 1246 1634 -3896 * 4280 280 30 22 chr5 143210981 143212294 -56417856 + HERVL40 LTR ERVL 2050 3372 -2158 1508 317 35 26 chr5 143214835 143215554 -56414596 + L1MEc LINE L1 61 785 -5611 1491 178 117 10 chr5 143215564 143215873 -56414277 + MLT1A1 LTR MaLR 21 362 -3 876 229 21 84 chr5 143215874 143216301 -56413849 + L1MEc LINE L1 784 1183 -5213 1726 254 62 20 chr5 143216322 143216771 -56413379 + MLT1F1 LTR MaLR 17 484 -83 358 182 0 13 chr5 143216781 143216858 -56413292 - L1MEc LINE L1 -5608 788 713 954 337 13 13 chr5 143216885 143217277 -56412873 - L1MEc LINE L1 -5761 635 244 1155 284 86 13 chr5 143217291 143217755 -56412395 + L1ME3A LINE L1 5609 6106 -64 911 315 69 5 chr5 143218129 143218519 -56411631 - LTR16C LTR ERVL -1 490 76 404 273 19 6 chr5 143218642 143218803 -56411347 - HAL1b LINE L1 -224 1124 962 15496 234 45 15 chr5 143218997 143224975 -56405175 - L1P4 LINE L1 -691 6125 1 1721 119 4 23 chr5 143225109 143225370 -56404780 - AluSx SINE Alu -20 292 37 1461 208 0 40 chr5 143225398 143225701 -56404449 + AluJb SINE Alu 1 291 -21 473 323 96 47 chr5 143225792 143226114 -56404036 - L2 LINE L2 -6 3307 2970 283 331 23 17 chr5 143226404 143226579 -56403571 + HAL1b LINE L1 108 283 -1065 416 345 134 49 chr5 143226634 143228227 -56401923 + L2 LINE L2 865 2592 -722 294 255 82 0 chr5 143228930 143229028 -56401122 - MIR SINE MIR -1 261 156 21 0 0 0 chr5 143229221 143229242 -56400908 + AT_rich Low_complexity Low_complexity 1 21 0 22 80 0 0 chr5 143229838 143229888 -56400262 + AT_rich Low_complexity Low_complexity 1 50 0 244 284 110 37 chr5 143230575 143230684 -56399466 - MIR SINE MIR 0 262 146 2298 118 8 8 chr5 143231010 143231365 -56398785 - THE1A LTR MaLR 0 355 1 10586 117 15 8 chr5 143231365 143232935 -56397215 - THE1A-int LTR MaLR 0 1580 1 2264 122 32 9 chr5 143232937 143233282 -56396868 - THE1A LTR MaLR -2 353 1 2284 94 0 0 chr5 143233834 143234131 -56396019 - AluY SINE Alu -10 301 5 24 32 0 0 chr5 143234394 143234425 -56395725 + AT_rich Low_complexity Low_complexity 1 31 0 24 53 0 0 chr5 143235387 143235425 -56394725 + AT_rich Low_complexity Low_complexity 1 38 0 12428 33 7 1 chr5 143235625 143237934 -56392216 + L1PA4 LINE L1 3833 6155 0 22 0 0 0 chr5 143238011 143238033 -56392117 + AT_rich Low_complexity Low_complexity 1 22 0 223 314 63 57 chr5 143238785 143238960 -56391190 - MER5B DNA MER1_type -1 177 2 736 273 21 0 chr5 143240170 143240364 -56389786 + MER63A DNA MER1_type 13 210 0 1278 260 166 20 chr5 143240463 143240949 -56389201 + MLT1E LTR MaLR 13 653 -1 437 255 181 0 chr5 143240949 143241098 -56389052 - MIR SINE MIR -12 250 75 23 68 0 0 chr5 143242184 143242228 -56387922 + AT_rich Low_complexity Low_complexity 1 44 0 233 141 113 42 chr5 143243209 143243280 -56386870 - MLT1D LTR MaLR -6 499 424 24 0 0 0 chr5 143243790 143243814 -56386336 + AT_rich Low_complexity Low_complexity 1 24 0 366 266 28 7 chr5 143244038 143244181 -56385969 + L1M4 LINE L1 2786 2931 -3215 369 0 0 0 chr5 143244220 143244261 -56385889 + (TG)n Simple_repeat Simple_repeat 2 42 0 773 332 40 32 chr5 143244435 143244811 -56385339 + L2 LINE L2 2376 2754 -560 356 294 159 62 chr5 143244810 143245150 -56385000 + L2 LINE L2 2940 3312 -1 * 235 250 118 22 chr5 143245194 143245330 -56384820 - L1M4 LINE L1 -2648 3498 3350 760 272 65 31 chr5 143245437 143245885 -56384265 - L1M4 LINE L1 -3005 3141 2679 363 284 173 15 chr5 143245951 143246292 -56383858 - L1M4 LINE L1 -3480 2666 2272 262 279 66 33 chr5 143246310 143246493 -56383657 - L1M4 LINE L1 -1280 4866 4678 1282 335 38 49 chr5 143246495 143247400 -56382750 + L1ME LINE L1 17 911 -5512 40 21 0 0 chr5 143247676 143247723 -56382427 + AT_rich Low_complexity Low_complexity 1 47 0 400 259 88 6 chr5 143247723 143247893 -56382257 + L1ME LINE L1 4939 5122 -1819 * 1368 263 81 30 chr5 143247885 143248209 -56381941 + L1ME LINE L1 5426 5732 -1229 326 23 0 23 chr5 143248209 143248253 -56381897 + (TA)n Simple_repeat Simple_repeat 2 44 0 1368 263 81 30 chr5 143248253 143248812 -56381338 + L1ME LINE L1 5732 6348 -613 242 407 52 7 chr5 143251204 143251254 -56378896 + L2 LINE L2 3116 3162 -110 216 0 0 0 chr5 143251254 143251278 -56378872 + (TTA)n Simple_repeat Simple_repeat 1 24 0 242 407 52 7 chr5 143251278 143251362 -56378788 + L2 LINE L2 3162 3256 -16 325 279 109 14 chr5 143251505 143251652 -56378498 + LTR16A1 LTR ERVL 247 407 -50 23 33 0 0 chr5 143252491 143252521 -56377629 + AT_rich Low_complexity Low_complexity 1 30 0 297 271 28 28 chr5 143252928 143253035 -56377115 - MLT1H LTR MaLR 0 549 443 1528 99 5 5 chr5 143253158 143253370 -56376780 - AluSx SINE Alu -11 301 90 2947 125 14 26 chr5 143253389 143253884 -56376266 - LTR22B LTR ERVK -3 489 1 555 168 0 0 chr5 143253884 143253979 -56376171 - AluSx SINE Alu -218 95 1 315 365 95 0 chr5 143253981 143254192 -56375958 - MLT1H LTR MaLR -252 297 67 25 0 0 0 chr5 143255190 143255215 -56374935 + AT_rich Low_complexity Low_complexity 1 25 0 1074 249 41 51 chr5 143255510 143255904 -56374246 + MLT1B LTR MaLR 1 390 0 304 260 114 24 chr5 143256020 143256143 -56374007 - MER103 DNA DNA -1 165 32 24 0 0 0 chr5 143256165 143256189 -56373961 + AT_rich Low_complexity Low_complexity 1 24 0 2759 273 95 29 chr5 143257378 143257977 -56372173 + L1MEc LINE L1 499 1057 -5339 6689 38 12 1 chr5 143257977 143258804 -56371346 + L1PA4 LINE L1 5318 6153 -2 2759 273 95 29 chr5 143258804 143259605 -56370545 + L1MEc LINE L1 1057 2013 -4383 1714 148 3 68 chr5 143259605 143259929 -56370221 - AluSq SINE Alu -10 303 1 2759 273 95 29 chr5 143259929 143260066 -56370084 + L1MEc LINE L1 2013 2139 -4257 654 133 0 9 chr5 143260050 143260163 -56369987 - L1MA7 LINE L1 -141 6150 6039 * 298 270 44 58 chr5 143260307 143260572 -56369578 - L1MD2 LINE L1 -28 6156 5897 1743 116 42 80 chr5 143260692 143261003 -56369147 + AluSg SINE Alu 1 299 -11 482 321 37 15 chr5 143261368 143261636 -56368514 - L1MC4 LINE L1 -986 7056 6783 220 200 0 0 chr5 143261892 143261937 -56368213 + A-rich Low_complexity Low_complexity 2 46 0 550 161 22 79 chr5 143262032 143262175 -56367975 + MSTB2 LTR MaLR 222 338 -58 991 327 123 20 chr5 143262238 143262919 -56367231 + L1M2 LINE L1 136 877 -6332 4753 178 48 13 chr5 143263221 143264547 -56365603 + L1MA4A LINE L1 4934 6302 -1 1684 133 104 26 chr5 143264781 143265127 -56365023 - THE1C LTR MaLR -2 373 1 221 56 0 28 chr5 143265302 143265338 -56364812 + (TATG)n Simple_repeat Simple_repeat 2 36 0 23 0 0 0 chr5 143265401 143265424 -56364726 + AT_rich Low_complexity Low_complexity 1 23 0 823 240 32 0 chr5 143265724 143265945 -56364205 - L1MB7 LINE L1 -78 6106 5879 * 1227 181 30 9 chr5 143265944 143266176 -56363974 - L1MB7 LINE L1 -550 5634 5398 328 123 358 25 chr5 143266343 143266424 -56363726 - AluJb SINE Alu 0 302 195 22 0 0 0 chr5 143266444 143266466 -56363684 + AT_rich Low_complexity Low_complexity 1 22 0 1921 118 10 10 chr5 143268096 143268400 -56361750 - THE1C LTR MaLR 0 375 72 575 121 9 95 chr5 143268471 143268587 -56361563 - THE1C LTR MaLR -269 106 1 317 208 0 0 chr5 143269313 143269366 -56360784 - MER45 DNA AcHobo 0 1581 1529 318 323 50 10 chr5 143269547 143269646 -56360504 + L2 LINE L2 3206 3308 -5 421 263 70 26 chr5 143271235 143271391 -56358759 + L2 LINE L2 3151 3313 0 223 399 8 15 chr5 143271429 143271562 -56358588 + L3 LINE CR1 187 318 -1259 265 318 138 32 chr5 143271711 143271928 -56358222 + MIR SINE MIR 23 262 0 610 297 59 5 chr5 143273095 143273297 -56356853 - MIR SINE MIR 0 262 50 23 0 0 0 chr5 143274271 143274294 -56355856 + AT_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr5 143274518 143274567 -56355583 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr5 143274602 143274623 -56355527 + AT_rich Low_complexity Low_complexity 1 21 0 255 31 0 0 chr5 143275631 143275663 -56354487 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 229 204 0 0 chr5 143276376 143276420 -56353730 + MIR SINE MIR 217 260 -2 24 0 0 0 chr5 143276462 143276486 -56353664 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr5 143278326 143278351 -56351799 + AT_rich Low_complexity Low_complexity 1 25 0 253 81 0 0 chr5 143278362 143278399 -56351751 + L1 LINE L1 4550 4586 -1560 * 803 265 78 48 chr5 143278398 143278922 -56351228 + L1ME1 LINE L1 3100 3639 -2507 3161 251 74 21 chr5 143278931 143280300 -56349850 + L1P1 LINE L1 4020 5470 -685 1816 241 63 57 chr5 143280400 143281081 -56349069 + L1ME1 LINE L1 5477 6161 -5 6956 31 2 0 chr5 143281545 143282522 -56347628 - L1P1 LINE L1 -631 5524 4546 3991 45 35 4 chr5 143282522 143283044 -56347106 + L1PA3 LINE L1 5626 6155 0 433 148 53 15 chr5 143283047 143283160 -56346990 - L1PA13 LINE L1 -252 5899 5786 1578 102 4 0 chr5 143283160 143283386 -56346764 + L1PA13 LINE L1 5931 6157 -6 21 36 0 0 chr5 143283540 143283568 -56346582 + AT_rich Low_complexity Low_complexity 1 28 0 2332 128 11 16 chr5 143285218 143285592 -56344558 + THE1C LTR MaLR 4 375 0 9259 119 9 78 chr5 143285593 143287288 -56342862 + THE1C-int LTR MaLR 2 1580 0 2141 125 50 17 chr5 143287290 143287651 -56342499 + THE1C LTR MaLR 3 375 0 1606 205 22 48 chr5 143287922 143287958 -56342192 + MLT1A1 LTR MaLR 13 48 -317 1880 150 3 10 chr5 143287958 143288265 -56341885 - AluSc SINE Alu -4 305 1 1606 205 22 48 chr5 143288265 143288584 -56341566 + MLT1A1 LTR MaLR 48 359 -6 206 360 76 48 chr5 143288886 143289319 -56340831 - L2 LINE L2 -588 2726 2282 512 326 26 37 chr5 143289876 143290253 -56339897 - L1ME LINE L1 -454 5708 5336 194 224 28 9 chr5 143290420 143290527 -56339623 + (TA)n Simple_repeat Simple_repeat 2 110 0 233 29 0 29 chr5 143291757 143291792 -56338358 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3035 41 3 0 chr5 143291792 143292161 -56337989 - L1PA5 LINE L1 -16 6138 5769 716 302 82 9 chr5 143292449 143292777 -56337373 + L1MCc LINE L1 17 368 -6055 531 278 46 6 chr5 143292873 143293046 -56337104 + L1MCc LINE L1 297 476 -5947 2075 227 119 43 chr5 143293296 143294092 -56336058 + L1M3e LINE L1 1111 1967 -5063 591 195 32 2 chr5 143294092 143294225 -56335925 - MSTD LTR MaLR -1 395 233 514 270 11 4 chr5 143294342 143294481 -56335669 - MSTC LTR MaLR -257 139 1 899 245 56 35 chr5 143294484 143294880 -56335270 + L1M3e LINE L1 1977 2380 -4657 284 263 13 0 chr5 143295866 143295942 -56334208 + (TA)n Simple_repeat Simple_repeat 2 78 0 9908 23 0 0 chr5 143296647 143297829 -56332321 + L1P LINE L1 4220 5401 -745 8551 251 38 36 chr5 143297972 143301945 -56328205 + L1PA15 LINE L1 163 4690 -2107 5033 148 19 26 chr5 143301948 143303960 -56326190 + L1PA15 LINE L1 4804 6812 -4 987 227 25 0 chr5 143303961 143304199 -56325951 - MLT2D LTR ERVL -170 244 1 776 180 4 144 chr5 143304463 143304719 -56325431 - MER67D LTR ERV1 -78 436 217 287 192 14 0 chr5 143304720 143304793 -56325357 + CT-rich Low_complexity Low_complexity 3 76 0 406 135 14 0 chr5 143304793 143304867 -56325283 - L1PA10 LINE L1 0 6168 6094 871 160 48 44 chr5 143304867 143305090 -56325060 - MER67D LTR ERV1 -293 368 8 23 33 0 0 chr5 143305411 143305441 -56324709 + AT_rich Low_complexity Low_complexity 1 30 0 2947 122 22 2 chr5 143306158 143306602 -56323548 + MLT2A2 LTR ERVL 1 453 0 7858 76 24 5 chr5 143306602 143307704 -56322446 + HERVL-A2 LTR ERVL 1 1123 -4531 1282 69 0 0 chr5 143307713 143307886 -56322264 + MLT2A2 LTR ERVL 281 453 0 3445 155 56 16 chr5 143308571 143309298 -56320852 - L1MA7 LINE L1 -3 6288 5533 2035 136 0 3 chr5 143309441 143309749 -56320401 - AluSc SINE Alu -2 307 1 253 374 64 15 chr5 143311266 143311469 -56318681 + L3 LINE CR1 1232 1444 -133 2162 132 3 0 chr5 143311805 143312115 -56318035 + AluSx SINE Alu 2 312 0 29 28 0 0 chr5 143312115 143312151 -56317999 + AT_rich Low_complexity Low_complexity 1 36 0 470 203 140 82 chr5 143313378 143313585 -56316565 + L1MD1 LINE L1 19 237 -6303 7883 242 53 15 chr5 143313799 143316525 -56313625 + L1MD1 LINE L1 94 2927 -3613 21 0 0 0 chr5 143316539 143316560 -56313590 + AT_rich Low_complexity Low_complexity 1 21 0 456 231 92 15 chr5 143316592 143316787 -56313363 + L1MD1 LINE L1 3056 3265 -3275 1943 141 33 0 chr5 143316789 143317088 -56313062 + AluSc SINE Alu 1 309 0 288 111 0 0 chr5 143317094 143317139 -56313011 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 691 258 9 13 chr5 143317151 143317376 -56312774 + L1MD1 LINE L1 3253 3476 -3064 1946 208 38 16 chr5 143317453 143317948 -56312202 + MER34C LTR ERV1 1 506 -79 662 245 63 24 chr5 143317953 143318332 -56311818 + L1MD1 LINE L1 3500 3893 -2647 7394 36 12 1 chr5 143318390 143320123 -56310027 - L1PA5 LINE L1 -8 6146 4404 4134 31 19 0 chr5 143320248 143320790 -56309360 - L1PA5 LINE L1 -1742 4404 3853 * 13512 44 1 3 chr5 143320789 143322579 -56307571 + L1PA5 LINE L1 2096 3880 -2266 2507 252 72 20 chr5 143322581 143323705 -56306445 + L1MD1 LINE L1 3932 5114 -1426 259 127 18 18 chr5 143323718 143323773 -56306377 + CT-rich Low_complexity Low_complexity 4 58 0 1194 185 12 15 chr5 143323779 143324038 -56306112 + L1MD1 LINE L1 6022 6279 -357 867 255 8 8 chr5 143324046 143324289 -56305861 + L1MD1 LINE L1 6394 6636 0 21 0 0 0 chr5 143324747 143324768 -56305382 + AT_rich Low_complexity Low_complexity 1 21 0 1488 194 14 38 chr5 143324790 143325135 -56305015 + L1M3e LINE L1 23 359 -6671 2416 219 55 47 chr5 143332426 143332473 -56297677 - L1M4 LINE L1 -2055 4091 4046 2025 148 0 0 chr5 143332473 143332777 -56297373 - AluSx SINE Alu -4 308 5 2416 219 55 47 chr5 143332777 143333670 -56296480 - L1M4 LINE L1 -2100 4046 3143 304 266 9 62 chr5 143336864 143336977 -56293173 - MIR3 SINE MIR -88 120 14 354 279 87 25 chr5 143337554 143337715 -56292435 + MER69A DNA AcHobo 3 173 -4 783 154 87 0 chr5 143337887 143338036 -56292114 + MLT2B1 LTR ERVL 319 480 -40 201 74 0 0 chr5 143338065 143338092 -56292058 + (TA)n Simple_repeat Simple_repeat 2 28 0 236 121 17 69 chr5 143338098 143338156 -56291994 + MLT2A2 LTR ERVL 397 451 -2 680 266 24 54 chr5 143338601 143338993 -56291157 - MLT1G1 LTR MaLR 0 595 182 657 157 36 14 chr5 143339001 143339141 -56291009 + L1MA8 LINE L1 6042 6184 -107 1207 227 32 4 chr5 143339334 143339585 -56290565 - MER21B LTR ERV1 -72 791 534 * 2587 200 22 14 chr5 143339583 143340137 -56290013 - MER21B LTR ERV1 -287 576 19 287 218 46 35 chr5 143340143 143340230 -56289920 - MER21B LTR ERV1 -766 97 10 343 213 180 53 chr5 143340232 143340382 -56289768 - MIR SINE MIR -77 185 17 2522 228 38 20 chr5 143341200 143342000 -56288150 - L1M4 LINE L1 -1062 5084 4271 454 244 7 22 chr5 143341999 143342134 -56288016 + L1M4 LINE L1 3952 4084 -2062 * 326 242 0 16 chr5 143342148 143342272 -56287878 - L1M4 LINE L1 -1883 4263 4142 411 138 213 0 chr5 143342507 143342601 -56287549 + MIR SINE MIR 77 190 -72 415 313 133 5 chr5 143342715 143342926 -56287224 - L3 LINE CR1 -60 1517 1280 200 265 0 0 chr5 143343272 143343321 -56286829 + MIR SINE MIR 142 190 -72 318 233 209 43 chr5 143344350 143344560 -56285590 - L1MCc LINE L1 -6154 269 25 24 32 0 0 chr5 143344630 143344661 -56285489 + AT_rich Low_complexity Low_complexity 1 31 0 423 330 135 16 chr5 143344699 143345084 -56285066 - L1M4 LINE L1 -1235 4911 4481 3066 170 41 3 chr5 143345184 143345796 -56284354 - L1MA4 LINE L1 -9 6291 5657 631 203 0 0 chr5 143345797 143345925 -56284225 + L1MA4 LINE L1 5531 5658 -646 4412 28 0 0 chr5 143345939 143346481 -56283669 - L1P LINE L1 -1099 5047 4506 26 0 0 0 chr5 143348972 143348998 -56281152 + AT_rich Low_complexity Low_complexity 1 26 0 3941 186 35 19 chr5 143349229 143350074 -56280076 - MER6 DNA MER2_type -6 859 1 701 217 49 27 chr5 143350637 143350821 -56279329 + MLT1D LTR MaLR 1 188 -317 1550 84 19 0 chr5 143350822 143351035 -56279115 + L1PA7 LINE L1 5930 6146 -8 399 182 0 0 chr5 143351171 143351248 -56278902 + MLT1D LTR MaLR 254 330 -175 2175 121 0 3 chr5 143352014 143352327 -56277823 - AluSx SINE Alu 0 312 1 701 163 52 6 chr5 143353038 143353210 -56276940 + ORSL DNA AcHobo 69 248 -27 209 122 24 0 chr5 143353608 143353649 -56276501 + T-rich Low_complexity Low_complexity 3 44 0 26 64 0 0 chr5 143354397 143354444 -56275706 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 0 chr5 143354485 143354508 -56275642 + AT_rich Low_complexity Low_complexity 1 23 0 348 0 0 0 chr5 143354522 143354564 -56275586 - L1PA6 LINE L1 -4 6150 6109 24 85 0 0 chr5 143354630 143354689 -56275461 + AT_rich Low_complexity Low_complexity 1 59 0 2313 83 3 10 chr5 143354938 143355251 -56274899 - AluY SINE Alu 0 311 1 3212 174 55 63 chr5 143355525 143355819 -56274331 - L1MA9 LINE L1 0 6312 6017 2149 127 0 3 chr5 143355819 143356133 -56274017 - AluSq SINE Alu 0 313 1 3212 174 55 63 chr5 143356133 143356367 -56273783 - L1MA9 LINE L1 -295 6017 5782 1717 156 169 0 chr5 143356367 143356733 -56273417 + MSTA LTR MaLR 1 428 0 3212 174 55 63 chr5 143356733 143357011 -56273139 - L1MA9 LINE L1 -530 5782 5512 7203 178 35 3 chr5 143357011 143358511 -56271639 + L1 LINE L1 3205 4753 -1393 1987 47 8 0 chr5 143358778 143359031 -56271119 - L1PA4 LINE L1 -6 6149 5895 2538 192 4 17 chr5 143359097 143359619 -56270531 + L1 LINE L1 4747 5261 -885 230 330 0 11 chr5 143360101 143360189 -56269961 + (TA)n Simple_repeat Simple_repeat 2 88 0 346 185 22 36 chr5 143360968 143361086 -56269064 + AluSp/q SINE Alu 210 320 0 396 59 0 0 chr5 143361088 143361139 -56269011 + (CA)n Simple_repeat Simple_repeat 1 51 0 256 33 0 0 chr5 143361139 143361169 -56268981 + MLT2A1 LTR ERVL 407 436 -8 3320 204 28 47 chr5 143361173 143362228 -56267922 - L1MD2 LINE L1 -243 6116 5079 2919 109 17 0 chr5 143362265 143362991 -56267159 - L1PA8A LINE L1 -456 5675 4942 219 36 0 0 chr5 143363025 143363053 -56267097 + (CA)n Simple_repeat Simple_repeat 2 29 0 2116 276 40 45 chr5 143363063 143363977 -56266173 - L1MD2 LINE L1 -1538 4608 3698 2150 128 3 0 chr5 143363977 143364282 -56265868 - AluSc SINE Alu -3 306 1 2116 276 40 45 chr5 143364282 143364344 -56265806 - L1MD2 LINE L1 -2448 3698 3637 542 296 100 35 chr5 143364367 143364588 -56265562 - L1ME LINE L1 -398 5772 5524 2137 136 0 0 chr5 143364588 143364890 -56265260 + AluSx SINE Alu 1 302 -10 542 296 100 35 chr5 143364890 143364979 -56265171 - L1ME LINE L1 -646 5524 5442 283 274 86 25 chr5 143365019 143365264 -56264886 - L1ME LINE L1 -875 5271 5012 223 96 39 0 chr5 143365584 143365636 -56264514 + (TA)n Simple_repeat Simple_repeat 2 55 0 608 117 43 0 chr5 143366694 143366788 -56263362 - THE1C LTR MaLR 0 375 278 4112 133 59 69 chr5 143366790 143367587 -56262563 - THE1C-int LTR MaLR -789 791 3 2434 101 18 52 chr5 143367589 143367977 -56262173 - THE1C LTR MaLR 0 375 1 266 326 43 0 chr5 143369948 143370040 -56260110 - MIR SINE MIR -14 248 153 5107 60 3 0 chr5 143370069 143370716 -56259434 + L1PA7 LINE L1 5495 6143 -11 278 263 51 25 chr5 143370844 143370962 -56259188 - L1ME4a LINE L1 -13 6108 5988 1061 195 91 0 chr5 143371069 143371240 -56258910 - AluJb SINE Alu 0 313 114 231 36 0 0 chr5 143371240 143371268 -56258882 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1061 195 91 0 chr5 143371268 143371346 -56258804 - AluJb SINE Alu -199 114 44 206 220 0 160 chr5 143371559 143371613 -56258537 + MIR SINE MIR 49 81 -181 552 90 0 0 chr5 143371613 143371691 -56258459 - MADE1 DNA Mariner -2 78 1 206 220 0 160 chr5 143371691 143371736 -56258414 + MIR SINE MIR 81 132 -130 278 341 38 23 chr5 143373188 143373320 -56256830 - MIR SINE MIR -52 210 77 278 341 38 23 chr5 143375088 143375220 -56254930 - MIR SINE MIR -52 210 77 315 271 86 86 chr5 143376013 143376305 -56253845 + L1MEc LINE L1 1846 2137 -4259 239 322 98 31 chr5 143376455 143376996 -56253154 + L1MEc LINE L1 2316 2892 -3323 728 285 70 35 chr5 143377014 143377643 -56252507 + L1MEc LINE L1 2934 3584 -2631 399 305 60 20 chr5 143377670 143377972 -56252178 + L1MEc LINE L1 3630 3943 -2272 330 207 24 0 chr5 143378106 143378188 -56251962 - L1MA10 LINE L1 -2 6332 6249 1732 105 27 19 chr5 143378190 143378447 -56251703 - THE1C LTR MaLR -107 268 10 229 304 80 54 chr5 143379564 143379676 -56250474 + L2 LINE L2 3158 3272 0 2614 102 3 0 chr5 143380477 143380831 -56249319 - THE1A LTR MaLR 0 355 1 4821 168 107 12 chr5 143381287 143382218 -56247932 - LTR28 LTR ERV1 0 1020 1 220 269 0 26 chr5 143382363 143382441 -56247709 + GA-rich Low_complexity Low_complexity 2 77 0 237 167 21 0 chr5 143382554 143382602 -56247548 + L1PA15-16 LINE L1 2866 2914 -3935 4671 240 54 15 chr5 143383285 143384836 -56245314 + L1PA13 LINE L1 989 2607 -4190 2673 122 46 0 chr5 143384836 143385213 -56244937 + MLT2A1 LTR ERVL 1 400 -44 318 50 0 0 chr5 143385213 143385253 -56244897 + (CA)n Simple_repeat Simple_repeat 1 40 0 2673 122 46 0 chr5 143385253 143385292 -56244858 + MLT2A1 LTR ERVL 400 436 -8 3992 257 41 9 chr5 143385295 143386555 -56243595 + L1PA13 LINE L1 2602 3901 -2896 595 330 76 53 chr5 143386668 143387234 -56242916 + L1ME LINE L1 25 603 -5467 612 75 0 0 chr5 143387853 143387933 -56242217 + MADE1 DNA Mariner 1 80 0 26 0 0 0 chr5 143388011 143388037 -56242113 + AT_rich Low_complexity Low_complexity 1 26 0 337 307 43 106 chr5 143388496 143388825 -56241325 - L2 LINE L2 0 3272 2965 312 51 0 0 chr5 143388871 143388910 -56241240 - L1PA2 LINE L1 -277 5878 5840 2412 24 0 7 chr5 143388910 143389186 -56240964 + L1PA2 LINE L1 5864 6152 -3 279 197 42 0 chr5 143389591 143389662 -56240488 + (CA)n Simple_repeat Simple_repeat 2 75 0 22 0 0 0 chr5 143390290 143390312 -56239838 + AT_rich Low_complexity Low_complexity 1 22 0 952 287 191 25 chr5 143390452 143390933 -56239217 + L2 LINE L2 2119 2679 -635 636 322 85 40 chr5 143392242 143392664 -56237486 + L2 LINE L2 2868 3308 -5 42 36 0 0 chr5 143392792 143392848 -56237302 + AT_rich Low_complexity Low_complexity 1 56 0 1978 240 42 14 chr5 143393067 143393641 -56236509 + L1M4 LINE L1 3812 4401 -1745 21 36 0 0 chr5 143393803 143393831 -56236319 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr5 143394613 143394655 -56235495 + AT_rich Low_complexity Low_complexity 1 42 0 237 155 0 0 chr5 143395056 143395114 -56235036 + T-rich Low_complexity Low_complexity 1 58 0 199 378 42 8 chr5 143396066 143396185 -56233965 + L2 LINE L2 2934 3056 -216 210 118 0 0 chr5 143396403 143396437 -56233713 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 356 289 47 74 chr5 143396568 143396717 -56233433 - MIR SINE MIR -89 173 29 1163 187 0 0 chr5 143397281 143397484 -56232666 - AluJb SINE Alu -15 297 95 954 253 136 96 chr5 143398136 143398657 -56231493 + MLT1F LTR MaLR 1 542 0 1381 164 137 0 chr5 143398710 143398973 -56231177 - L1MC1 LINE L1 -25 6308 6010 1107 206 8 23 chr5 143398973 143399499 -56230651 - L1MC1 LINE L1 -582 5751 5128 1198 231 79 25 chr5 143399787 143400142 -56230008 + MLT1A2 LTR MaLR 1 374 0 2874 271 88 30 chr5 143400142 143401323 -56228827 + MLT1A2-int LTR MaLR 1 1369 -2 1276 234 38 54 chr5 143401331 143401703 -56228447 + MLT1A2 LTR MaLR 1 366 -8 22 35 0 0 chr5 143401889 143401918 -56228232 + AT_rich Low_complexity Low_complexity 1 29 0 30 45 0 0 chr5 143402002 143402046 -56228104 + AT_rich Low_complexity Low_complexity 1 44 0 25 31 0 0 chr5 143403075 143403107 -56227043 + AT_rich Low_complexity Low_complexity 1 32 0 1288 251 106 20 chr5 143403620 143404026 -56226124 - LTR16B LTR ERVL -23 441 1 34 84 0 0 chr5 143404965 143405048 -56225102 + AT_rich Low_complexity Low_complexity 1 83 0 2108 125 0 0 chr5 143405133 143405429 -56224721 - AluSx SINE Alu -16 296 1 198 71 0 0 chr5 143405512 143405540 -56224610 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 24 77 0 0 chr5 143405727 143405779 -56224371 + AT_rich Low_complexity Low_complexity 1 52 0 1921 114 83 31 chr5 143405800 143406150 -56224000 + L1MA3 LINE L1 5588 5955 -350 405 0 0 0 chr5 143406238 143406283 -56223867 + (TA)n Simple_repeat Simple_repeat 1 45 0 401 0 20 0 chr5 143406334 143406383 -56223767 + (CA)n Simple_repeat Simple_repeat 1 50 0 265 192 110 0 chr5 143406412 143406485 -56223665 + MLT1I LTR MaLR 312 392 -17 1301 252 46 60 chr5 143406868 143407364 -56222786 + MER65B LTR ERV1 1 489 -42 726 281 30 25 chr5 143408258 143408571 -56221579 + MER34 LTR ERV1 34 380 -162 620 220 48 60 chr5 143408571 143408821 -56221329 + LTR49-int LTR ERV1 1570 1816 -3055 231 319 35 9 chr5 143408973 143409086 -56221064 + MER101B LTR ERV1 204 319 -251 647 188 25 71 chr5 143409559 143409756 -56220394 + LTR49-int LTR ERV1 3545 3732 -2866 756 170 17 72 chr5 143409844 143410079 -56220071 + LTR49-int LTR ERV1 3731 3952 -2646 996 258 85 41 chr5 143410107 143410719 -56219431 + LTR49-int LTR ERV1 3351 4963 -1060 730 275 6 6 chr5 143411912 143412094 -56218056 - LTR8 LTR ERV1 0 691 510 5958 95 18 6 chr5 143412095 143413305 -56216845 + L1PA13 LINE L1 4919 6149 -14 1778 203 20 91 chr5 143413496 143414057 -56216093 - LTR8 LTR ERV1 -170 521 1 296 272 48 19 chr5 143414061 143414164 -56215986 + MIR SINE MIR 82 187 -75 306 333 94 36 chr5 143415912 143416104 -56214046 - MIR SINE MIR -4 258 56 42 20 0 0 chr5 143416219 143416268 -56213882 + AT_rich Low_complexity Low_complexity 1 49 0 379 108 36 36 chr5 143416365 143416476 -56213674 + (TA)n Simple_repeat Simple_repeat 2 112 0 22 70 0 0 chr5 143416663 143416706 -56213444 + AT_rich Low_complexity Low_complexity 1 43 0 2171 130 8 8 chr5 143416919 143417274 -56212876 - THE1A LTR MaLR 0 355 1 10819 105 23 3 chr5 143417274 143418823 -56211327 - THE1A-int LTR MaLR 0 1580 1 2076 135 23 9 chr5 143418825 143419173 -56210977 - THE1A LTR MaLR -2 353 1 830 200 6 6 chr5 143419519 143419684 -56210466 - LTR51 LTR ERV1 0 671 507 583 175 0 158 chr5 143419977 143420160 -56209990 + MER67D LTR ERV1 4 157 -357 1537 156 4 4 chr5 143420248 143420504 -56209646 - AluSx SINE Alu -4 308 53 2012 100 0 0 chr5 143420532 143420802 -56209348 - AluSq SINE Alu -2 311 42 750 224 109 9 chr5 143420808 143421018 -56209132 + MER67C LTR ERV1 145 375 -335 229 179 54 18 chr5 143421141 143421197 -56208953 + MER92C LTR ERV1 494 551 -3 25 31 0 0 chr5 143422081 143422113 -56208037 + AT_rich Low_complexity Low_complexity 1 32 0 225 337 57 34 chr5 143422848 143423023 -56207127 + LTR67 LTR ERVL 372 550 -7 338 245 54 48 chr5 143423150 143423297 -56206853 - L1MCc LINE L1 -6154 269 122 24 32 0 0 chr5 143423430 143423461 -56206689 + AT_rich Low_complexity Low_complexity 1 31 0 410 333 138 16 chr5 143423499 143423883 -56206267 - L1M4 LINE L1 -1235 4911 4481 3126 170 41 3 chr5 143423983 143424595 -56205555 - L1MA4 LINE L1 -9 6291 5657 675 203 0 0 chr5 143424596 143424724 -56205426 + L1MA4 LINE L1 5531 5658 -646 10104 30 3 0 chr5 143424738 143425949 -56204201 - L1P LINE L1 -1099 5047 3833 24 53 0 0 chr5 143426148 143426186 -56203964 + AT_rich Low_complexity Low_complexity 1 38 0 24 32 0 0 chr5 143427128 143427159 -56202991 + AT_rich Low_complexity Low_complexity 1 31 0 2284 94 0 0 chr5 143427422 143427719 -56202431 + AluY SINE Alu 5 301 -10 2264 122 32 9 chr5 143428271 143428616 -56201534 + THE1A LTR MaLR 1 353 -2 10585 116 15 9 chr5 143428618 143430190 -56199960 + THE1A-int LTR MaLR 1 1580 0 2298 118 8 8 chr5 143430190 143430545 -56199605 + THE1A LTR MaLR 1 355 0 244 284 110 37 chr5 143430871 143430980 -56199170 + MIR SINE MIR 146 262 0 22 80 0 0 chr5 143431667 143431717 -56198433 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 143432312 143432333 -56197817 + AT_rich Low_complexity Low_complexity 1 21 0 373 330 107 30 chr5 143432397 143432630 -56197520 + MIR SINE MIR 11 261 -1 557 332 129 50 chr5 143433334 143434497 -56195653 - L2 LINE L2 -722 2592 1338 283 331 23 17 chr5 143435046 143435221 -56194929 - HAL1b LINE L1 -1065 283 108 473 323 96 47 chr5 143435511 143435833 -56194317 + L2 LINE L2 2970 3307 -6 1461 208 0 40 chr5 143435924 143436227 -56193923 - AluJb SINE Alu -21 291 1 1721 119 4 23 chr5 143436255 143436516 -56193634 + AluSx SINE Alu 37 292 -20 15490 234 44 15 chr5 143436650 143442632 -56187518 + L1P4 LINE L1 1 6125 -691 404 273 19 6 chr5 143442826 143442987 -56187163 + HAL1b LINE L1 962 1124 -224 911 315 69 5 chr5 143443110 143443500 -56186650 + LTR16C LTR ERVL 76 490 -1 1155 284 86 13 chr5 143443874 143444338 -56185812 - L1ME3A LINE L1 -64 6106 5609 954 337 13 13 chr5 143444352 143444744 -56185406 + L1MEc LINE L1 244 635 -5761 358 182 0 13 chr5 143444771 143444848 -56185302 + L1MEc LINE L1 713 788 -5608 1726 254 62 20 chr5 143444858 143445307 -56184843 - MLT1F1 LTR MaLR -83 484 17 876 229 21 84 chr5 143445328 143445755 -56184395 - L1MEc LINE L1 -5213 1183 784 1491 178 117 10 chr5 143445756 143446065 -56184085 - MLT1A1 LTR MaLR -3 362 21 1508 317 35 26 chr5 143446075 143446794 -56183356 - L1MEc LINE L1 -5611 785 61 1258 185 25 7 chr5 143450273 143450554 -56179596 - L1MA9 LINE L1 0 6312 6027 7414 96 3 1 chr5 143450571 143452429 -56177721 + L1PA7 LINE L1 4292 6153 -1 1200 173 23 31 chr5 143452655 143452915 -56177235 - L1MA9 LINE L1 -273 6039 5782 289 163 0 0 chr5 143452989 143453038 -56177112 + L1M3 LINE L1 5817 5865 -469 846 182 41 6 chr5 143453054 143453224 -56176926 - L1MA9 LINE L1 -532 5780 5605 * 2563 168 13 2 chr5 143453221 143453685 -56176465 - L1M2 LINE L1 -525 5787 5319 334 317 13 21 chr5 143453708 143453884 -56176266 + L1M3a LINE L1 317 657 -5298 279 93 0 0 chr5 143455199 143455242 -56174908 + (CA)n Simple_repeat Simple_repeat 1 43 0 1479 194 107 122 chr5 143455267 143455359 -56174791 - MLT2B1 LTR ERVL 0 520 428 191 36 36 0 chr5 143455359 143455387 -56174763 + (TG)n Simple_repeat Simple_repeat 1 29 0 1479 194 107 122 chr5 143455387 143455820 -56174330 - MLT2B1 LTR ERVL -92 428 3 3549 231 34 21 chr5 143456137 143457068 -56173082 - L1MA9 LINE L1 -38 6274 5332 7648 218 65 57 chr5 143457074 143459602 -56170548 - L1MA9 LINE L1 -866 5280 2735 2702 10 0 0 chr5 143459603 143459900 -56170250 + AluY SINE Alu 11 307 -4 874 146 0 0 chr5 143459900 143460037 -56170113 + Tigger1 DNA MER2_type 698 834 -1584 405 273 130 0 chr5 143460040 143460194 -56169956 - L1M4c LINE L1 -4782 1602 1429 231 189 0 0 chr5 143460535 143460588 -56169562 + (TG)n Simple_repeat Simple_repeat 2 54 0 21 0 0 0 chr5 143460588 143460609 -56169541 + AT_rich Low_complexity Low_complexity 1 21 0 1330 230 130 84 chr5 143461617 143462631 -56167519 + L1ME2 LINE L1 5077 6154 -10 10662 34 0 3 chr5 143462875 143464948 -56165202 + L1PA4 LINE L1 4084 6155 0 4863 223 81 96 chr5 143465115 143465243 -56164907 - L1MD3 LINE L1 -14 8399 8271 2445 54 0 0 chr5 143465243 143465538 -56164612 - AluY SINE Alu 0 311 17 4863 223 81 96 chr5 143465538 143466604 -56163546 - L1MD3 LINE L1 -142 8271 7251 2497 128 117 4 chr5 143466604 143467074 -56163076 + L1MA2 LINE L1 5782 6304 0 4863 223 81 96 chr5 143467074 143468148 -56162002 - L1MD3 LINE L1 -1162 7251 6163 2087 129 8 29 chr5 143468151 143468710 -56161440 + MER51A LTR ERV1 2 634 0 1309 267 40 21 chr5 143468736 143469216 -56160934 - L1MD3 LINE L1 -830 5734 5246 392 214 116 0 chr5 143469211 143469323 -56160827 - L1MD3 LINE L1 -3491 3073 2949 * 1661 278 108 53 chr5 143469325 143470873 -56159277 - L1MD3 LINE L1 -4473 2091 445 432 289 43 85 chr5 143471104 143471448 -56158702 - L1MD3 LINE L1 -5640 405 81 2395 28 7 3 chr5 143471448 143471735 -56158415 + AluY SINE Alu 16 303 -8 432 289 43 85 chr5 143471735 143471812 -56158338 - L1MD3 LINE L1 -5964 81 2 215 228 0 0 chr5 143472051 143472108 -56158042 + T-rich Low_complexity Low_complexity 1 57 0 4232 179 44 24 chr5 143472108 143473096 -56157054 - L1PA16 LINE L1 -35 6131 5116 2059 130 38 49 chr5 143473096 143473464 -56156686 - THE1B LTR MaLR 0 364 1 10520 127 17 0 chr5 143473464 143475017 -56155133 - THE1B-int LTR MaLR 0 1580 1 892 116 86 96 chr5 143475017 143475205 -56154945 - THE1B LTR MaLR 0 364 177 6151 101 11 11 chr5 143475205 143476585 -56153565 - L1PA8 LINE L1 -6 6481 5098 11796 154 23 26 chr5 143476594 143477452 -56152698 - L1PA8 LINE L1 -3202 3259 2400 1917 129 3 7 chr5 143477452 143477746 -56152404 - AluSg SINE Alu -17 293 1 11796 154 23 26 chr5 143477746 143477973 -56152177 - L1PA8 LINE L1 -4061 2400 2174 2254 65 0 0 chr5 143477973 143478250 -56151900 - AluY SINE Alu 0 311 35 11796 154 23 26 chr5 143478250 143480406 -56149744 - L1PA8 LINE L1 -4287 2174 10 1301 130 0 0 chr5 143480416 143480600 -56149550 - THE1B LTR MaLR -180 184 1 1835 215 11 17 chr5 143480600 143481060 -56149090 - L1PA16 LINE L1 -1026 5120 4664 1062 207 13 4 chr5 143481055 143481292 -56148858 + L1PA16 LINE L1 4446 4684 -1462 * 199 379 83 0 chr5 143481294 143481426 -56148724 + L2 LINE L2 2906 3048 -265 335 295 40 60 chr5 143481604 143481804 -56148346 + L2 LINE L2 3118 3313 0 24 32 0 0 chr5 143483328 143483359 -56146791 + AT_rich Low_complexity Low_complexity 1 31 0 1266 247 47 30 chr5 143484151 143484556 -56145594 + MER92A LTR ERV1 1 412 0 1888 214 181 60 chr5 143484759 143485496 -56144654 - LTR1B LTR ERV1 0 826 1 251 234 65 0 chr5 143485883 143485960 -56144190 - MER92A LTR ERV1 -79 333 252 7597 23 1 1 chr5 143485960 143487576 -56142574 + L1PA3 LINE L1 4560 6175 0 24 77 0 0 chr5 143488317 143488369 -56141781 + AT_rich Low_complexity Low_complexity 1 52 0 3992 118 23 2 chr5 143488693 143489338 -56140812 + L1MA2 LINE L1 5646 6304 0 21 36 0 0 chr5 143489338 143489366 -56140784 + AT_rich Low_complexity Low_complexity 1 28 0 334 290 32 19 chr5 143490078 143490233 -56139917 - L1MC4 LINE L1 -89 7953 7797 637 301 85 18 chr5 143490444 143490879 -56139271 + L1ME3A LINE L1 4769 5232 -914 198 103 0 0 chr5 143490879 143490908 -56139242 + (TATG)n Simple_repeat Simple_repeat 3 31 0 801 335 42 13 chr5 143490935 143491325 -56138825 + LTR16A LTR ERVL 51 450 0 1086 272 120 5 chr5 143491328 143491368 -56138782 + L1ME3A LINE L1 5270 5304 -866 293 62 21 0 chr5 143491368 143491416 -56138734 + (CA)n Simple_repeat Simple_repeat 1 49 0 1086 272 120 5 chr5 143491416 143491980 -56138170 + L1ME3A LINE L1 5304 5970 -200 3051 20 0 0 chr5 143492534 143492882 -56137268 - L1P2 LINE L1 -373 5782 5435 1793 40 0 4 chr5 143492882 143493107 -56137043 + L1PA4 LINE L1 5931 6155 0 631 324 53 25 chr5 143493324 143493722 -56136428 + L1MCc LINE L1 62 470 -5953 238 315 11 22 chr5 143493771 143493863 -56136287 + L1MCc LINE L1 972 1062 -5361 867 306 107 41 chr5 143494429 143495858 -56134292 + L1MCc LINE L1 956 2680 -4442 414 177 52 0 chr5 143495869 143495965 -56134185 + L1MCc LINE L1 3408 3508 -3433 26 30 0 0 chr5 143498215 143498248 -56131902 + AT_rich Low_complexity Low_complexity 1 33 0 1826 195 6 8 chr5 143498261 143498615 -56131535 - MLT1A1 LTR MaLR -12 353 1 31 0 0 0 chr5 143498755 143498786 -56131364 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 143498998 143499026 -56131124 + AT_rich Low_complexity Low_complexity 1 28 0 222 318 40 8 chr5 143499694 143499820 -56130330 + (TATATG)n Simple_repeat Simple_repeat 6 135 0 1613 196 63 11 chr5 143500542 143500889 -56129261 + MLT1A1 LTR MaLR 1 365 0 216 0 0 0 chr5 143502000 143502024 -56128126 + (CA)n Simple_repeat Simple_repeat 2 25 0 1294 186 22 47 chr5 143502054 143502329 -56127821 - AluJo SINE Alu -32 280 13 182 150 25 0 chr5 143506119 143506159 -56123991 + CT-rich Low_complexity Low_complexity 4 44 0 1038 255 120 16 chr5 143506582 143506958 -56123192 + MER47B DNA MER2_type 4 418 0 23 0 0 0 chr5 143507929 143507952 -56122198 + AT_rich Low_complexity Low_complexity 1 23 0 360 0 0 0 chr5 143508049 143508089 -56122061 + (TG)n Simple_repeat Simple_repeat 2 41 0 186 286 71 14 chr5 143508117 143508187 -56121963 - L2 LINE L2 -2 3311 3238 22 0 0 0 chr5 143508222 143508244 -56121906 + AT_rich Low_complexity Low_complexity 1 22 0 211 323 105 38 chr5 143508278 143508411 -56121739 + MIR SINE MIR 6 147 -115 1368 289 44 42 chr5 143508827 143509279 -56120871 - L1ME3A LINE L1 -67 6103 5653 1884 170 37 3 chr5 143509279 143509632 -56120518 - MER47A DNA MER2_type -1 365 1 1368 289 44 42 chr5 143509632 143509698 -56120452 - L1ME3A LINE L1 -517 5653 5589 3092 108 11 83 chr5 143509698 143510096 -56120054 - L1PA13 LINE L1 0 6163 5823 234 0 0 0 chr5 143510096 143510122 -56120028 + (TG)n Simple_repeat Simple_repeat 1 26 0 3092 108 11 83 chr5 143510122 143510337 -56119813 - L1PA13 LINE L1 -340 5823 5594 1368 289 44 42 chr5 143510337 143510458 -56119692 - L1ME3A LINE L1 -581 5589 5462 447 35 0 0 chr5 143510460 143510517 -56119633 + (TG)n Simple_repeat Simple_repeat 2 58 0 552 215 18 55 chr5 143510517 143510680 -56119470 - L1MA10 LINE L1 -4 6330 6174 2051 228 50 11 chr5 143510726 143511169 -56118981 + MLT1C LTR MaLR 1 460 -7 639 346 101 37 chr5 143512521 143513282 -56116868 + L1ME3 LINE L1 4281 5087 -1059 22 0 0 0 chr5 143513298 143513320 -56116830 + AT_rich Low_complexity Low_complexity 1 22 0 567 290 112 36 chr5 143513351 143514015 -56116135 + L1ME3 LINE L1 5128 5856 -306 25 31 0 0 chr5 143514075 143514107 -56116043 + AT_rich Low_complexity Low_complexity 1 32 0 622 154 0 44 chr5 143515027 143515209 -56114941 + GA-rich Low_complexity Low_complexity 2 175 0 22 80 0 0 chr5 143516865 143516915 -56113235 + AT_rich Low_complexity Low_complexity 1 50 0 22 70 0 0 chr5 143517150 143517193 -56112957 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 143518574 143518596 -56111554 + AT_rich Low_complexity Low_complexity 1 22 0 653 296 45 9 chr5 143519664 143519884 -56110266 + MIR SINE MIR 6 233 -29 22 0 0 0 chr5 143520461 143520483 -56109667 + AT_rich Low_complexity Low_complexity 1 22 0 2247 104 0 3 chr5 143521212 143521519 -56108631 + AluSc SINE Alu 1 306 -3 661 262 48 24 chr5 143522224 143522430 -56107720 - MIR SINE MIR -49 213 3 1476 194 39 11 chr5 143522800 143523079 -56107071 - AluJb SINE Alu -25 287 1 23 54 0 0 chr5 143523291 143523328 -56106822 + AT_rich Low_complexity Low_complexity 1 37 0 253 294 216 28 chr5 143524944 143525199 -56104951 - MER102a DNA MER1_type -3 327 25 207 0 0 0 chr5 143626058 143626081 -56004069 + (T)n Simple_repeat Simple_repeat 1 23 0 843 246 103 0 chr5 143626207 143626410 -56003740 + MER58A DNA MER1_type 1 224 0 235 320 140 54 chr5 143626998 143627220 -56002930 + MIR SINE MIR 8 248 -14 287 256 37 0 chr5 143627595 143627677 -56002473 - LTR67 LTR ERVL -50 507 423 345 62 0 0 chr5 143629807 143629855 -56000295 + (TC)n Simple_repeat Simple_repeat 1 48 0 21 0 0 0 chr5 143630100 143630121 -56000029 + AT_rich Low_complexity Low_complexity 1 21 0 214 269 8 42 chr5 143630833 143630952 -55999198 + (TA)n Simple_repeat Simple_repeat 2 116 0 1639 153 18 0 chr5 143631025 143631306 -55998844 - L1MC1 LINE L1 -209 6124 5839 34 24 0 0 chr5 143631792 143631833 -55998317 + AT_rich Low_complexity Low_complexity 1 41 0 1793 272 151 36 chr5 143631950 143632938 -55997212 - L1MC4a LINE L1 -106 7702 6602 897 200 0 0 chr5 143633014 143633200 -55996950 - FRAM SINE Alu 0 185 1 438 213 98 16 chr5 143633200 143633322 -55996828 - L1MC4 LINE L1 -1444 6598 6467 34 24 0 0 chr5 143634331 143634372 -55995778 + AT_rich Low_complexity Low_complexity 1 41 0 238 271 14 14 chr5 143634405 143634475 -55995675 + L2 LINE L2 1612 1681 -1633 294 381 106 23 chr5 143634717 143635103 -55995047 + L2 LINE L2 2855 3272 0 385 314 143 0 chr5 143635769 143635944 -55994206 + MER58C DNA MER1_type 1 200 -15 2146 102 7 3 chr5 143636329 143636623 -55993527 - AluSq SINE Alu -18 295 1 1212 157 60 28 chr5 143636745 143637057 -55993093 - THE1C LTR MaLR -1 427 1 28 29 0 0 chr5 143638449 143638484 -55991666 + AT_rich Low_complexity Low_complexity 1 35 0 3462 183 45 70 chr5 143638692 143638979 -55991171 - L1PB4 LINE L1 -7 6149 5856 242 87 22 0 chr5 143638979 143639025 -55991125 - LTR66 LTR ERVL -170 440 394 3462 183 45 70 chr5 143639025 143639798 -55990352 - L1PB4 LINE L1 -300 5856 5069 1689 159 47 0 chr5 143640324 143640601 -55989549 - AluSx SINE Alu 0 312 23 181 351 61 18 chr5 143640812 143640926 -55989224 - L2 LINE L2 -33 3280 3162 2191 132 24 86 chr5 143642564 143643055 -55987095 + L1MA8 LINE L1 5825 6285 -6 2136 121 0 0 chr5 143644553 143644842 -55985308 + AluSq SINE Alu 1 289 -24 279 149 91 41 chr5 143644850 143644971 -55985179 + (TATATG)n Simple_repeat Simple_repeat 6 132 0 183 27 54 27 chr5 143645015 143645052 -55985098 + (TA)n Simple_repeat Simple_repeat 2 39 0 725 211 37 51 chr5 143646187 143646481 -55983669 + pTR5 LTR ERV1 741 1030 -1408 3219 103 196 32 chr5 143646701 143647292 -55982858 + LTR12 LTR ERV1 1 688 0 252 0 0 0 chr5 143649015 143649043 -55981107 + (TG)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr5 143649349 143649370 -55980780 + AT_rich Low_complexity Low_complexity 1 21 0 504 99 0 88 chr5 143650238 143650329 -55979821 + MLT2B1 LTR ERVL 3 85 -435 26 74 0 0 chr5 143650544 143650598 -55979552 + AT_rich Low_complexity Low_complexity 1 54 0 190 239 90 30 chr5 143650848 143650915 -55979235 - MIR SINE MIR -19 243 173 297 289 86 61 chr5 143653036 143653233 -55976917 + MIR SINE MIR 60 261 -1 198 298 18 0 chr5 143654113 143654170 -55975980 + MIR SINE MIR 49 106 -156 26 50 0 0 chr5 143655114 143655154 -55974996 + AT_rich Low_complexity Low_complexity 1 40 0 319 361 25 25 chr5 143655213 143655371 -55974779 - MIR SINE MIR -49 213 56 293 333 9 0 chr5 143655858 143655963 -55974187 + L1MC/D LINE L1 5536 5641 -2167 1351 193 68 3 chr5 143656185 143656480 -55973670 - MER65A LTR ERV1 -34 411 98 331 200 0 0 chr5 143656513 143656583 -55973567 - L1MA4A LINE L1 -156 6147 6078 1987 240 83 9 chr5 143656585 143657161 -55972989 - MER65A-int LTR ERV1 -16 4855 4237 534 185 28 9 chr5 143657162 143657270 -55972880 - MER65A-int LTR ERV1 -740 4131 4022 677 63 21 0 chr5 143657275 143657370 -55972780 + AluY SINE Alu 205 301 -10 902 269 71 4 chr5 143657370 143657717 -55972433 - MER65A-int LTR ERV1 -858 4013 3606 330 200 44 67 chr5 143657804 143657894 -55972256 - MER31-int LTR ERV1 -2424 5696 5609 * 495 169 0 22 chr5 143657892 143657981 -55972169 - MER31-int LTR ERV1 -1137 3799 3713 841 110 34 7 chr5 143657989 143658135 -55972015 - L1MA4A LINE L1 -9 6996 6847 1795 158 52 47 chr5 143658137 143658499 -55971651 + THE1B LTR MaLR 1 364 0 11245 111 5 2 chr5 143658499 143660074 -55970076 + THE1B-int LTR MaLR 1 1580 0 2065 143 51 20 chr5 143660073 143660424 -55969726 + THE1B LTR MaLR 3 364 0 * 6777 187 21 24 chr5 143660424 143662064 -55968086 - L1MA4A LINE L1 -156 6849 5207 2666 99 0 0 chr5 143662064 143662417 -55967733 + THE1A LTR MaLR 3 355 0 10799 103 9 27 chr5 143662417 143664026 -55966124 + THE1A-int LTR MaLR 1 1580 0 2610 100 6 0 chr5 143664029 143664379 -55965771 + THE1A LTR MaLR 4 355 0 6777 187 21 24 chr5 143664379 143665062 -55965088 - L1MA4A LINE L1 -1799 5206 4518 5336 148 25 7 chr5 143665077 143665954 -55964196 - MER4D LTR ERV1 -9 894 2 5789 201 39 63 chr5 143665956 143667757 -55962393 - L1MA4A LINE L1 -2328 4520 2676 1765 195 0 3 chr5 143667757 143668070 -55962080 - AluJo SINE Alu 0 312 1 5789 201 39 63 chr5 143668070 143668229 -55961921 - L1MA4A LINE L1 -4172 2676 2606 2031 224 26 66 chr5 143668229 143668806 -55961344 + MLT2B3 LTR ERVL 1 554 0 5789 201 39 63 chr5 143668806 143668833 -55961317 - L1MA4A LINE L1 -4242 2606 2580 * 8886 215 59 39 chr5 143668827 143671130 -55959020 - L1MA4A LINE L1 -4489 2360 13 191 225 183 0 chr5 143672124 143672195 -55957955 - L2 LINE L2 0 3313 3230 23 0 0 0 chr5 143672215 143672238 -55957912 + AT_rich Low_complexity Low_complexity 1 23 0 5839 111 1 3 chr5 143672442 143673296 -55956854 + L1PA7 LINE L1 3804 4655 -1491 2603 114 5 2 chr5 143673295 143673688 -55956462 + L1P LINE L1 1898 2291 -3855 * 4792 65 0 45 chr5 143673688 143674347 -55955803 + L1PA7 LINE L1 5511 6147 -7 395 302 69 0 chr5 143674631 143674747 -55955403 - MER94 DNA DNA 0 134 11 1032 184 47 47 chr5 143674805 143675110 -55955040 - MER61B LTR ERV1 -28 396 1 661 125 117 25 chr5 143675245 143675365 -55954785 + FLAM_C SINE Alu 3 133 0 26 0 0 0 chr5 143675688 143675714 -55954436 + AT_rich Low_complexity Low_complexity 1 26 0 417 337 47 14 chr5 143676244 143676569 -55953581 - MLT1K LTR MaLR -87 501 122 22 35 0 0 chr5 143677600 143677629 -55952521 + AT_rich Low_complexity Low_complexity 1 29 0 313 350 121 11 chr5 143677728 143678100 -55952050 + L1MB8 LINE L1 5473 5885 -293 25 0 0 0 chr5 143678369 143678394 -55951756 + AT_rich Low_complexity Low_complexity 1 25 0 6902 60 2 17 chr5 143678759 143679370 -55950780 + L1PA7 LINE L1 4878 5496 -658 2232 121 0 0 chr5 143679370 143679676 -55950474 + AluY SINE Alu 4 309 -2 6902 60 2 17 chr5 143679676 143680339 -55949811 + L1PA7 LINE L1 5496 6143 -11 376 289 99 0 chr5 143680658 143680779 -55949371 + MIR SINE MIR 118 250 -12 276 289 67 47 chr5 143681327 143681476 -55948674 - MLT1J LTR MaLR -13 498 347 28 0 0 0 chr5 143681632 143681660 -55948490 + AT_rich Low_complexity Low_complexity 1 28 0 451 296 24 0 chr5 143681679 143681804 -55948346 - MIR SINE MIR -20 242 115 231 272 204 10 chr5 143682709 143682812 -55947338 + MER5A DNA MER1_type 8 130 -59 212 327 80 49 chr5 143683267 143683530 -55946620 + L2 LINE L2 1384 1654 -1660 440 338 97 42 chr5 143683637 143684040 -55946110 + L2 LINE L2 2275 2699 -615 1324 150 98 4 chr5 143684083 143684337 -55945813 - L1MA9 LINE L1 0 6312 6035 320 328 125 49 chr5 143684361 143684811 -55945339 + L2 LINE L2 2751 3232 -81 24 0 0 0 chr5 143685225 143685249 -55944901 + AT_rich Low_complexity Low_complexity 1 24 0 236 311 11 0 chr5 143685982 143686072 -55944078 - MER113 DNA MER1_type? -430 91 1 188 302 0 0 chr5 143686072 143686125 -55944025 + MIR3 SINE MIR 153 205 -3 680 244 69 24 chr5 143686405 143686696 -55943454 + MER69 DNA AcHobo 2144 2447 -79 2669 23 0 0 chr5 143686801 143687107 -55943043 + AluYa5 SINE Alu 1 306 -5 3129 215 51 29 chr5 143687251 143688607 -55941543 - L1MB4 LINE L1 -13 6167 4775 307 82 0 61 chr5 143688640 143688689 -55941461 - MER75 DNA T2_type 0 514 469 2020 90 32 32 chr5 143689226 143689536 -55940614 + AluSp SINE Alu 1 310 -3 232 231 51 51 chr5 143689721 143689799 -55940351 - L2 LINE L2 -2 3311 3234 276 100 0 0 chr5 143690205 143690245 -55939905 + (TG)n Simple_repeat Simple_repeat 2 41 0 2500 176 66 19 chr5 143691204 143691722 -55938428 + MER34 LTR ERV1 1 542 0 28 0 0 0 chr5 143692523 143692551 -55937599 + AT_rich Low_complexity Low_complexity 1 28 0 5672 74 42 0 chr5 143692608 143693380 -55936770 + L1PA8 LINE L1 5365 6168 -4 21 89 0 0 chr5 143693423 143693479 -55936671 + AT_rich Low_complexity Low_complexity 1 56 0 32 0 0 0 chr5 143693976 143694008 -55936142 + AT_rich Low_complexity Low_complexity 1 32 0 766 93 0 0 chr5 143695562 143695669 -55934481 + AluSc SINE Alu 194 300 -9 1397 178 62 9 chr5 143695753 143696073 -55934077 - L1MA9 LINE L1 -820 5326 4990 * 3803 185 43 68 chr5 143696071 143697046 -55933104 + L1MA9 LINE L1 5342 6292 -20 585 270 37 25 chr5 143698552 143698715 -55931435 + MER5A DNA MER1_type 15 179 -10 1916 192 12 10 chr5 143699635 143700036 -55930114 - L1MD3 LINE L1 -8 7987 7586 890 244 76 25 chr5 143700038 143700394 -55929756 - L1MC4a LINE L1 -1207 6601 6228 228 296 75 80 chr5 143700719 143701641 -55928509 - L1 LINE L1 -1603 4543 3627 348 24 0 0 chr5 143701893 143701934 -55928216 + (TG)n Simple_repeat Simple_repeat 1 41 0 204 40 0 0 chr5 143701933 143701958 -55928192 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 21 71 0 0 chr5 143702144 143702186 -55927964 + AT_rich Low_complexity Low_complexity 1 42 0 6702 142 16 55 chr5 143702276 143702584 -55927566 - Tigger3b DNA MER2_type -1797 1231 913 2166 113 51 23 chr5 143702584 143702938 -55927212 + THE1B LTR MaLR 1 364 0 6702 142 16 55 chr5 143702938 143703910 -55926240 - Tigger3b DNA MER2_type -2115 913 1 245 79 79 26 chr5 143704434 143704510 -55925640 + (TTATA)n Simple_repeat Simple_repeat 1 80 0 1511 128 45 8 chr5 143704744 143704778 -55925372 - MLT2A1 LTR ERVL -8 436 405 351 0 0 0 chr5 143704778 143704817 -55925333 + (CA)n Simple_repeat Simple_repeat 2 40 0 1511 128 45 8 chr5 143704817 143705025 -55925125 - MLT2A1 LTR ERVL -39 405 185 302 160 11 85 chr5 143705082 143705176 -55924974 + L1MCa LINE L1 1999 2085 -4341 2102 128 13 0 chr5 143705809 143706115 -55924035 + AluSq SINE Alu 4 313 0 1000 197 79 5 chr5 143709076 143709279 -55920871 - MER58A DNA MER1_type -2 222 5 384 284 20 10 chr5 143710229 143710331 -55919819 + MER81 DNA DNA 1 103 -11 1268 201 36 26 chr5 143710367 143710944 -55919206 - MER63 DNA MER1_type 0 1060 283 25 31 0 0 chr5 143711265 143711297 -55918853 + AT_rich Low_complexity Low_complexity 1 32 0 31 44 0 0 chr5 143711696 143711741 -55918409 + AT_rich Low_complexity Low_complexity 1 45 0 27 0 0 0 chr5 143711821 143711848 -55918302 + AT_rich Low_complexity Low_complexity 1 27 0 297 152 76 0 chr5 143712282 143712348 -55917802 - L1MC2 LINE L1 -6 6338 6268 1349 89 76 9 chr5 143715671 143715896 -55914254 - MSTA LTR MaLR -188 240 1 1647 164 34 74 chr5 143716038 143716417 -55913733 - MLT1A1 LTR MaLR -1 364 1 1421 313 39 15 chr5 143716858 143717394 -55912756 + ERVL LTR ERVL 321 869 -4127 292 289 108 51 chr5 143717801 143718028 -55912122 + ERVL LTR ERVL 1475 1778 -3218 288 333 75 11 chr5 143719188 143719362 -55910788 + ERVL LTR ERVL 5097 5281 -483 198 0 0 0 chr5 143719480 143719502 -55910648 + (T)n Simple_repeat Simple_repeat 1 22 0 32 95 0 0 chr5 143721454 143721549 -55908601 + AT_rich Low_complexity Low_complexity 1 95 0 222 37 0 0 chr5 143721925 143721952 -55908198 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1767 168 10 7 chr5 143722806 143723103 -55907047 - AluJb SINE Alu -14 298 1 311 250 94 74 chr5 143723433 143723484 -55906666 - HAL1b LINE L1 -903 445 396 2216 97 3 3 chr5 143723484 143723782 -55906368 - AluSx SINE Alu -14 298 1 311 250 94 74 chr5 143723782 143723986 -55906164 - HAL1b LINE L1 -952 396 185 2290 110 3 0 chr5 143724354 143724663 -55905487 - AluSg SINE Alu 0 310 1 274 329 52 28 chr5 143724982 143725234 -55904916 - HAL1 LINE L1 -2190 317 60 266 337 51 0 chr5 143725877 143725975 -55904175 - MIR3 SINE MIR -19 189 87 21 89 0 0 chr5 143726287 143726343 -55903807 + AT_rich Low_complexity Low_complexity 1 56 0 1732 122 134 100 chr5 143727195 143727606 -55902544 - MSTA LTR MaLR -3 425 1 2088 129 42 20 chr5 143728959 143729315 -55900835 - THE1B LTR MaLR 0 364 1 206 150 0 25 chr5 143730408 143730448 -55899702 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 1765 182 57 114 chr5 143731040 143731299 -55898851 - MER67D LTR ERV1 -1 513 300 1471 200 37 51 chr5 143731299 143731674 -55898476 - MLT1A2 LTR MaLR 0 374 5 1765 182 57 114 chr5 143731674 143731957 -55898193 - MER67D LTR ERV1 -214 300 2 290 254 0 14 chr5 143732586 143732657 -55897493 - MER96B DNA MER1_type? 0 417 348 * 980 236 26 26 chr5 143732651 143732922 -55897228 + MER96B DNA MER1_type? 147 417 0 1098 218 33 0 chr5 143733723 143733934 -55896216 - MER58A DNA MER1_type -6 218 1 296 364 33 13 chr5 143734914 143735065 -55895085 - MIR3 SINE MIR -10 198 45 296 252 68 2 chr5 143735525 143735658 -55894492 - MER96B DNA MER1_type? 0 175 2 232 161 0 54 chr5 143736322 143736378 -55893772 + (TATATG)n Simple_repeat Simple_repeat 3 55 0 2218 186 11 2 chr5 143736935 143737381 -55892769 - L1MB3 LINE L1 -12 6171 5722 21 82 0 0 chr5 143737453 143737502 -55892648 + AT_rich Low_complexity Low_complexity 1 49 0 594 180 8 39 chr5 143738097 143738225 -55891925 - FLAM_A SINE Alu -7 135 12 3636 139 0 0 chr5 143739196 143739722 -55890428 - MER1A DNA MER1_type -1 526 1 29 70 0 0 chr5 143741450 143741507 -55888643 + AT_rich Low_complexity Low_complexity 1 57 0 1875 128 0 83 chr5 143741801 143741935 -55888215 + AluSc SINE Alu 1 145 -164 2504 61 0 3 chr5 143741935 143742247 -55887903 + AluY SINE Alu 1 311 0 1875 128 0 83 chr5 143742247 143742449 -55887701 + AluSc SINE Alu 145 309 0 662 268 57 0 chr5 143742561 143742718 -55887432 + MER45A DNA AcHobo 1 166 -12 497 197 32 144 chr5 143742785 143742973 -55887177 + MER5B DNA MER1_type 10 176 -2 398 270 22 104 chr5 143744979 143745297 -55884853 + L1MC4a LINE L1 3777 4068 -2078 611 331 59 44 chr5 143745342 143745914 -55884236 + L1MC4a LINE L1 4253 4833 -1313 1509 43 5 0 chr5 143745984 143746172 -55883978 - L1PA5 LINE L1 -124 6030 5842 1039 39 0 0 chr5 143746172 143746299 -55883851 + L1PA5 LINE L1 6025 6151 -3 1087 283 100 17 chr5 143746619 143747251 -55882899 + L1MC4a LINE L1 5267 5615 -568 308 317 147 36 chr5 143747666 143747890 -55882260 - L2 LINE L2 -2806 508 260 1871 236 37 44 chr5 143748286 143748850 -55881300 + MER92B LTR ERV1 6 565 -71 190 184 26 0 chr5 143748987 143749025 -55881125 - L2 LINE L2 -1062 2252 2214 1631 182 3 3 chr5 143749035 143749347 -55880803 + AluSx SINE Alu 1 312 0 228 114 0 0 chr5 143749841 143749876 -55880274 - L1PA4 LINE L1 -113 6042 6008 403 48 0 32 chr5 143749876 143749938 -55880212 + L1PA6 LINE L1 6095 6154 0 17058 40 2 1 chr5 143750010 143752890 -55877260 - L1PA5 LINE L1 0 6154 3276 1060 54 0 7 chr5 143752890 143753039 -55877111 + L1PA5 LINE L1 3147 3294 -2852 28 61 0 0 chr5 143753754 143753803 -55876347 + AT_rich Low_complexity Low_complexity 1 49 0 324 280 191 6 chr5 143754458 143754615 -55875535 - MIR SINE MIR -11 251 66 309 26 0 0 chr5 143755492 143755530 -55874620 + (TG)n Simple_repeat Simple_repeat 2 39 0 1145 189 157 16 chr5 143755530 143755779 -55874371 - AluJb SINE Alu -18 284 1 281 291 13 25 chr5 143755974 143756053 -55874097 - L2 LINE L2 -49 3264 3187 21 36 0 0 chr5 143756755 143756783 -55873367 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 143756838 143756873 -55873277 + AT_rich Low_complexity Low_complexity 1 35 0 340 222 56 0 chr5 143756883 143756973 -55873177 + L1MA10 LINE L1 6237 6331 -3 321 258 121 8 chr5 143756973 143757097 -55873053 - HAL1b LINE L1 -142 1206 1069 5837 107 28 5 chr5 143757159 143758754 -55871396 + L1PA10 LINE L1 4551 6157 -11 638 243 109 52 chr5 143758794 143759197 -55870953 - HAL1b LINE L1 -346 1002 577 903 299 41 44 chr5 143759699 143760287 -55869863 - HAL1b LINE L1 -695 653 68 1273 227 75 12 chr5 143760788 143761110 -55869040 + MLT1D LTR MaLR 164 505 0 382 349 32 61 chr5 143761491 143761769 -55868381 - L1ME LINE L1 -527 5637 5368 214 262 0 33 chr5 143762968 143763029 -55867121 + GA-rich Low_complexity Low_complexity 2 60 0 1808 75 17 0 chr5 143764122 143764363 -55865787 - HERVL-A2 LTR ERVL -5409 245 1 225 97 0 0 chr5 143764363 143764394 -55865756 - MLT2A2 LTR ERVL 0 453 423 444 275 0 0 chr5 143764398 143764536 -55865614 + (CATA)n Simple_repeat Simple_repeat 2 139 0 258 300 0 0 chr5 143764540 143764630 -55865520 + L1MC4 LINE L1 6614 6703 -1339 258 259 24 0 chr5 143764574 143764659 -55865491 - L1MC4 LINE L1 -1341 6701 6615 252 279 23 0 chr5 143764690 143764776 -55865374 - L1MC4 LINE L1 -1341 6701 6614 329 311 0 0 chr5 143764804 143764894 -55865256 + L1MC4 LINE L1 6614 6703 -1339 321 267 47 0 chr5 143764834 143764920 -55865230 - L1MC4 LINE L1 -1339 6703 6614 * 2669 109 45 18 chr5 143764926 143764943 -55865207 - MLT2A2 LTR ERVL -40 480 465 207 0 0 0 chr5 143764943 143764966 -55865184 + (TG)n Simple_repeat Simple_repeat 2 24 0 2669 109 45 18 chr5 143764966 143765352 -55864798 - MLT2A2 LTR ERVL -55 465 5 2007 122 0 39 chr5 143767148 143767459 -55862691 - AluSx SINE Alu 0 312 14 228 303 8 0 chr5 143768023 143768145 -55862005 + (TA)n Simple_repeat Simple_repeat 1 123 0 200 94 31 0 chr5 143770488 143770520 -55859630 + (CCA)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr5 143772536 143772557 -55857593 + AT_rich Low_complexity Low_complexity 1 21 0 270 106 0 0 chr5 143772887 143772934 -55857216 + (TA)n Simple_repeat Simple_repeat 1 47 0 41630 41 26 2 chr5 143773543 143779549 -55850601 + L1PA3 LINE L1 3 6155 0 760 176 11 74 chr5 143780673 143780849 -55849301 + FAM SINE Alu 1 165 -10 613 242 78 14 chr5 143781485 143781704 -55848446 - L1MC4 LINE L1 -2289 5519 5287 348 137 24 57 chr5 143782424 143782548 -55847602 + (CATATA)n Simple_repeat Simple_repeat 1 120 0 28 71 0 0 chr5 143782552 143782608 -55847542 + AT_rich Low_complexity Low_complexity 1 56 0 320 287 90 58 chr5 143782631 143782819 -55847331 - HAL1 LINE L1 -1679 828 635 803 201 45 6 chr5 143782995 143783174 -55846976 - MER5A DNA MER1_type -3 186 1 1187 202 53 100 chr5 143783326 143783687 -55846463 - MLT1A1 LTR MaLR -21 344 1 181 269 0 19 chr5 143783990 143784042 -55846108 + MIR SINE MIR 208 258 -4 658 306 38 26 chr5 143784108 143784373 -55845777 + LTR40a LTR ERVL 252 519 0 387 60 0 0 chr5 143784632 143784682 -55845468 + (CA)n Simple_repeat Simple_repeat 1 50 0 736 189 71 57 chr5 143786969 143787181 -55842969 - MER20 DNA MER1_type -4 215 1 23 0 0 0 chr5 143788099 143788122 -55842028 + AT_rich Low_complexity Low_complexity 1 23 0 36 0 0 0 chr5 143788386 143788422 -55841728 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr5 143789216 143789246 -55840904 + AT_rich Low_complexity Low_complexity 1 30 0 29980 35 3 2 chr5 143790518 143794979 -55835171 - L1PA4 LINE L1 -3 6152 1689 2005 168 36 5 chr5 143795598 143795986 -55834164 - L1MA4 LINE L1 -22 6278 5879 227 88 0 0 chr5 143795980 143796011 -55834139 + L1MA4 LINE L1 5833 5882 -303 * 372 255 21 21 chr5 143796188 143796282 -55833868 - LTR16A LTR ERVL -10 440 347 1974 162 103 5 chr5 143796286 143796674 -55833476 - MSTA LTR MaLR -2 426 1 5183 151 6 30 chr5 143796674 143797555 -55832595 - MSTA-int LTR MaLR 0 1580 721 837 105 8 8 chr5 143797553 143797686 -55832464 - MSTA-int LTR MaLR -1517 134 2 * 1855 157 87 20 chr5 143797687 143798088 -55832062 - MSTA LTR MaLR 0 428 1 517 269 50 19 chr5 143798088 143798248 -55831902 - LTR16A LTR ERVL -102 348 184 23 86 0 0 chr5 143798670 143798728 -55831422 + AT_rich Low_complexity Low_complexity 1 58 0 31 58 0 0 chr5 143798962 143799014 -55831136 + AT_rich Low_complexity Low_complexity 1 52 0 446 347 61 14 chr5 143801069 143801482 -55828668 - LTR33 LTR ERVL -28 493 19 705 224 66 0 chr5 143801780 143801976 -55828174 - MLT1B LTR MaLR -1 389 181 263 189 0 14 chr5 143801978 143802052 -55828098 + GA-rich Low_complexity Low_complexity 2 74 0 684 159 63 0 chr5 143802081 143802207 -55827943 - AluJo SINE Alu -178 134 1 404 218 75 53 chr5 143802212 143802345 -55827805 - MLT1B LTR MaLR -219 171 36 22 56 0 0 chr5 143802424 143802460 -55827690 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5 143802752 143802788 -55827362 + AT_rich Low_complexity Low_complexity 1 36 0 437 289 121 20 chr5 143802797 143803046 -55827104 - L1M4 LINE L1 -3200 2946 2673 245 246 53 59 chr5 143803054 143803241 -55826909 + L1ME3A LINE L1 5763 5948 -222 219 69 0 0 chr5 143803512 143803541 -55826609 + (CA)n Simple_repeat Simple_repeat 2 30 0 319 213 37 37 chr5 143803601 143803709 -55826441 + L1MCa LINE L1 28 135 -6291 3774 188 64 7 chr5 143803716 143804197 -55825953 + L1MCa LINE L1 339 886 -5540 216 97 0 0 chr5 143804197 143804228 -55825922 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3774 188 64 7 chr5 143804228 143804556 -55825594 + L1MCa LINE L1 886 1194 -5232 4354 243 47 5 chr5 143804664 143805997 -55824153 + L1M4 LINE L1 2658 4046 -2100 4760 147 42 28 chr5 143856007 143856901 -55773249 + L1MA4A LINE L1 5395 6301 -2 291 114 0 0 chr5 143857344 143857388 -55772762 + (CA)n Simple_repeat Simple_repeat 1 44 0 23 0 0 0 chr5 143857388 143857411 -55772739 + AT_rich Low_complexity Low_complexity 1 23 0 319 346 96 19 chr5 143857442 143857702 -55772448 - MLT1J LTR MaLR -140 371 92 227 290 68 56 chr5 143857964 143858126 -55772024 - MARNA DNA Mariner -221 365 202 787 309 64 58 chr5 143858764 143859330 -55770820 + HAL1 LINE L1 828 1396 -1111 283 364 22 17 chr5 143859407 143859638 -55770512 + HAL1 LINE L1 1549 1780 -727 258 207 0 0 chr5 143860168 143860226 -55769924 + CT-rich Low_complexity Low_complexity 3 60 0 24 0 0 0 chr5 143860958 143860982 -55769168 + AT_rich Low_complexity Low_complexity 1 24 0 583 272 22 39 chr5 143861207 143861387 -55768763 + MER5B DNA MER1_type 1 177 -1 1833 127 0 43 chr5 143861954 143862254 -55767896 + AluSx SINE Alu 1 287 -25 231 61 0 0 chr5 143862258 143862291 -55767859 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 222 37 0 0 chr5 143862298 143862325 -55767825 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1030 272 36 65 chr5 143863412 143863857 -55766293 + LTR45 LTR ERV1 1 432 -93 23 0 0 0 chr5 143865005 143865028 -55765122 + AT_rich Low_complexity Low_complexity 1 23 0 2378 45 0 0 chr5 143865139 143865425 -55764725 - AluY SINE Alu 0 311 26 218 303 15 0 chr5 143865680 143865746 -55764404 - L2 LINE L2 -6 3307 3241 1060 149 0 0 chr5 143865874 143866055 -55764095 - L1 LINE L1 -1840 4306 4126 1695 230 43 24 chr5 143866895 143867361 -55762789 + L1MA9 LINE L1 5800 6274 -38 538 315 104 42 chr5 143867587 143868114 -55762036 - L1ME2 LINE L1 -287 5946 5390 358 309 37 62 chr5 143868458 143868730 -55761420 - L1ME2 LINE L1 -4220 2176 1912 395 288 122 54 chr5 143868796 143869206 -55760944 - HAL1b LINE L1 -654 694 257 987 61 0 8 chr5 143869664 143869795 -55760355 - LTR7 LTR ERV1 -320 130 1 2359 85 50 19 chr5 143869795 143870171 -55759979 - HERVH LTR ERV1 0 7713 7326 1226 116 82 5 chr5 143870173 143870380 -55759770 - HERVH LTR ERV1 -1894 5819 5597 * 4272 151 0 1 chr5 143870377 143871040 -55759110 - HERVH LTR ERV1 -2564 5149 4488 3208 124 8 6 chr5 143871042 143871543 -55758607 - HERVH LTR ERV1 -3720 3993 3492 * 20165 97 57 24 chr5 143871533 143874718 -55755432 - HERVH LTR ERV1 -4423 3290 1 3353 69 0 7 chr5 143874720 143875171 -55754979 - LTR7 LTR ERV1 -2 448 1 17106 30 1 0 chr5 143875838 143878650 -55751500 + L1PA4 LINE L1 3338 6155 0 2080 121 0 0 chr5 143878779 143879090 -55751060 - AluSx SINE Alu 0 311 1 1410 310 83 55 chr5 143880804 143881455 -55748695 - MER115 DNA AcHobo 0 693 25 641 255 119 58 chr5 143881478 143881941 -55748209 + HAL1b LINE L1 89 579 -769 307 270 117 12 chr5 143882004 143882167 -55747983 + HAL1b LINE L1 429 608 -740 1208 188 8 60 chr5 143882327 143882593 -55747557 - AluSx SINE Alu -60 252 1 243 0 0 0 chr5 143883682 143883709 -55746441 + (CA)n Simple_repeat Simple_repeat 2 28 0 209 299 75 91 chr5 143883844 143883968 -55746182 + L2 LINE L2 2853 2977 -295 387 0 0 0 chr5 143883968 143884011 -55746139 + (CA)n Simple_repeat Simple_repeat 2 44 0 209 299 75 91 chr5 143884011 143884217 -55745933 + L2 LINE L2 2977 3178 -94 23 54 0 0 chr5 143884532 143884569 -55745581 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 143887034 143887055 -55743095 + AT_rich Low_complexity Low_complexity 1 21 0 13514 29 1 0 chr5 143887341 143888984 -55741166 + L1P LINE L1 1698 3341 -2805 189 0 0 0 chr5 143889140 143889161 -55740989 + (TG)n Simple_repeat Simple_repeat 1 21 0 * 225 0 0 0 chr5 143889160 143889185 -55740965 + (GA)n Simple_repeat Simple_repeat 1 25 0 2578 241 55 1 chr5 143889371 143890040 -55740110 - L1MA10 LINE L1 -830 5316 4612 1537 182 27 8 chr5 143890040 143890927 -55739223 + L1MA10 LINE L1 5285 6331 -3 21 0 0 0 chr5 143891203 143891224 -55738926 + AT_rich Low_complexity Low_complexity 1 21 0 852 220 94 0 chr5 143891948 143892171 -55737979 + L1MB7 LINE L1 5900 6143 -41 1960 277 60 23 chr5 143893647 143894488 -55735662 + L1ME3A LINE L1 5289 6160 -10 7456 194 23 16 chr5 143895550 143896673 -55733477 + L1 LINE L1 3654 4793 -1353 1710 129 61 14 chr5 143896673 143896953 -55733197 + AluSx SINE Alu 1 293 -19 7456 194 23 16 chr5 143896953 143897540 -55732610 + L1 LINE L1 4793 5375 -771 33 25 0 0 chr5 143897710 143897750 -55732400 + AT_rich Low_complexity Low_complexity 1 40 0 1151 305 70 6 chr5 143897826 143898183 -55731967 - LTR16C LTR ERVL 0 491 112 436 221 105 26 chr5 143898337 143898527 -55731623 + L1MC5 LINE L1 7711 7915 -46 * 1959 202 30 9 chr5 143898519 143898959 -55731191 - L1MC3 LINE L1 -1184 6601 6153 1691 196 60 25 chr5 143898962 143899432 -55730718 - L1MC3 LINE L1 -1421 6364 5879 268 177 16 0 chr5 143899420 143899482 -55730668 - L1MC3 LINE L1 -863 5283 5221 * 2463 75 0 3 chr5 143899559 143899864 -55730286 + AluY SINE Alu 1 304 -7 1639 168 70 22 chr5 143900007 143900365 -55729785 - THE1C LTR MaLR 0 375 1 25 31 0 0 chr5 143901131 143901163 -55728987 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 143901232 143901253 -55728897 + AT_rich Low_complexity Low_complexity 1 21 0 3453 191 29 29 chr5 143901334 143902466 -55727684 + L1PA16 LINE L1 4465 5584 -582 3714 132 34 2 chr5 143902466 143903048 -55727102 + MER51A LTR ERV1 17 617 -17 2798 186 15 2 chr5 143903070 143903598 -55726552 + L1PA16 LINE L1 5623 6157 -9 28 29 0 0 chr5 143903598 143903633 -55726517 + AT_rich Low_complexity Low_complexity 1 35 0 1153 40 13 0 chr5 143903633 143903783 -55726367 - L1PA4 LINE L1 -3 6152 6001 498 70 90 0 chr5 143904201 143904407 -55725743 + (TA)n Simple_repeat Simple_repeat 1 224 0 379 286 25 8 chr5 143904466 143904585 -55725565 + MIR SINE MIR 138 258 -4 204 231 0 0 chr5 143904592 143904631 -55725519 + (CAT)n Simple_repeat Simple_repeat 3 41 0 219 306 24 12 chr5 143905141 143905226 -55724924 + L2 LINE L2 2709 2794 -520 26 0 0 0 chr5 143906142 143906168 -55723982 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 143906565 143906593 -55723557 + AT_rich Low_complexity Low_complexity 1 28 0 4272 165 59 18 chr5 143906673 143907544 -55722606 + L1MA4 LINE L1 5386 6291 -9 2191 96 0 27 chr5 143907544 143907845 -55722305 - AluSx SINE Alu -19 293 1 227 330 125 29 chr5 143909401 143909713 -55720437 + L2 LINE L2 2852 3193 -120 359 288 63 31 chr5 143910400 143910622 -55719528 + HAL1b LINE L1 120 348 -1000 476 263 39 34 chr5 143910653 143910858 -55719292 + HAL1b LINE L1 404 609 -739 1700 204 78 37 chr5 143911046 143911531 -55718619 + MLT1D LTR MaLR 1 505 0 207 196 0 0 chr5 143911669 143911715 -55718435 + A-rich Low_complexity Low_complexity 3 48 0 917 272 54 66 chr5 143912154 143912296 -55717854 + L1M4 LINE L1 3876 4018 -2128 1895 115 4 0 chr5 143912296 143912575 -55717575 + AluSx SINE Alu 1 280 -32 189 0 0 0 chr5 143912577 143912598 -55717552 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 917 272 54 66 chr5 143912598 143912831 -55717319 + L1M4 LINE L1 4019 4253 -1893 492 225 108 17 chr5 143912831 143912951 -55717199 + FLAM_A SINE Alu 1 131 -2 917 272 54 66 chr5 143912951 143913219 -55716931 + L1M4 LINE L1 4253 4515 -1631 709 279 97 18 chr5 143913386 143913726 -55716424 + L1M4 LINE L1 4541 4907 -1239 230 143 54 18 chr5 143913883 143913939 -55716211 + L1MC4a LINE L1 7218 7275 -533 22 0 0 0 chr5 143914266 143914288 -55715862 + AT_rich Low_complexity Low_complexity 1 22 0 32 0 0 0 chr5 143915772 143915804 -55714346 + AT_rich Low_complexity Low_complexity 1 32 0 2641 210 65 83 chr5 143916270 143917194 -55712956 + L1MB2 LINE L1 3341 4247 -1899 5187 242 49 50 chr5 143918000 143919011 -55711139 + L1ME1 LINE L1 3743 4754 -1412 1772 107 0 0 chr5 143919011 143919244 -55710906 + AluSx SINE Alu 35 267 -45 5187 242 49 50 chr5 143919244 143919854 -55710296 + L1ME1 LINE L1 4754 5364 -802 195 42 0 0 chr5 143919854 143919878 -55710272 + (CAA)n Simple_repeat Simple_repeat 1 24 0 5187 242 49 50 chr5 143919878 143920528 -55709622 + L1ME1 LINE L1 5364 6001 -165 2129 208 16 5 chr5 143920155 143920597 -55709553 + L1MB2 LINE L1 5631 6077 -94 * 206 162 0 0 chr5 143921166 143921203 -55708947 + (CA)n Simple_repeat Simple_repeat 2 38 0 313 284 0 0 chr5 143922011 143922078 -55708072 - MER21B LTR ERV1 -796 67 1 1434 172 11 22 chr5 143922125 143922392 -55707758 + AluJo SINE Alu 35 298 -14 348 231 22 11 chr5 143923932 143924023 -55706127 + HAL1b LINE L1 492 583 -765 986 150 48 0 chr5 143924082 143924269 -55705881 + L1MA4 LINE L1 6099 6294 -6 315 257 27 40 chr5 143924342 143924490 -55705660 + HAL1b LINE L1 514 659 -689 22 0 0 0 chr5 143925190 143925212 -55704938 + AT_rich Low_complexity Low_complexity 1 22 0 255 31 0 0 chr5 143925649 143925681 -55704469 + (CAA)n Simple_repeat Simple_repeat 2 33 0 800 250 29 10 chr5 143926165 143926369 -55703781 + MER63A DNA MER1_type 3 210 0 189 0 0 0 chr5 143927220 143927241 -55702909 + (T)n Simple_repeat Simple_repeat 1 21 0 23 0 0 0 chr5 143928311 143928334 -55701816 + AT_rich Low_complexity Low_complexity 1 23 0 457 285 103 35 chr5 143928716 143929112 -55701038 - HAL1 LINE L1 -1182 1325 903 781 289 114 16 chr5 143929378 143929782 -55700368 - MLT1J LTR MaLR -6 505 1 787 263 43 18 chr5 143930403 143930684 -55699466 - L1ME3A LINE L1 0 6170 5883 2791 173 45 18 chr5 143930734 143931334 -55698816 - L1MC3 LINE L1 -7 7778 7163 7954 35 1 0 chr5 143931651 143933381 -55696769 + L1PA4 LINE L1 4425 6155 0 1818 127 4 0 chr5 143933465 143933732 -55696418 - AluSc SINE Alu -2 307 40 24 32 0 0 chr5 143933838 143933869 -55696281 + AT_rich Low_complexity Low_complexity 1 31 0 1828 214 63 2 chr5 143934576 143934987 -55695163 - MER63B DNA MER1_type 0 436 1 215 328 142 16 chr5 143935288 143935471 -55694679 + MIR SINE MIR 57 262 0 237 382 81 11 chr5 143935988 143936260 -55693890 + L3b LINE CR1 1102 1392 -191 24 53 0 0 chr5 143936657 143936695 -55693455 + AT_rich Low_complexity Low_complexity 1 38 0 219 333 17 0 chr5 143937357 143937417 -55692733 - L2 LINE L2 -64 3208 3148 298 350 45 42 chr5 143937606 143937943 -55692207 - L2 LINE L2 -733 2581 2244 253 331 71 24 chr5 143938359 143938528 -55691622 + L2 LINE L2 3132 3308 -5 813 130 8 0 chr5 143939423 143939554 -55690596 - L1PA16 LINE L1 -4 6162 6031 243 0 0 0 chr5 143939688 143939715 -55690435 + (TA)n Simple_repeat Simple_repeat 2 28 0 297 135 0 0 chr5 143940394 143940446 -55689704 + (TG)n Simple_repeat Simple_repeat 2 53 0 418 304 137 15 chr5 143941493 143941697 -55688453 - MIR SINE MIR 0 262 34 2011 156 0 0 chr5 143941739 143942041 -55688109 - AluSx SINE Alu -10 302 1 182 354 67 63 chr5 143942754 143943200 -55686950 - L2 LINE L2 -1 3271 2824 2289 59 7 6 chr5 143943669 143944033 -55686117 + LTR7 LTR ERV1 126 448 -2 563 129 65 16 chr5 143944665 143944789 -55685361 - L1MA8 LINE L1 -15 6276 6147 26 30 0 0 chr5 143945235 143945268 -55684882 + AT_rich Low_complexity Low_complexity 1 33 0 2060 130 0 0 chr5 143945318 143945618 -55684532 - AluY SINE Alu -11 300 1 210 143 0 0 chr5 143945623 143945658 -55684492 + (TA)n Simple_repeat Simple_repeat 2 36 0 2525 23 7 3 chr5 143946877 143947176 -55682974 - AluY SINE Alu -11 300 1 276 220 0 34 chr5 143949295 143949354 -55680796 + MLT1I LTR MaLR 353 409 0 626 253 27 82 chr5 143949486 143949743 -55680407 + MIR SINE MIR 15 257 -5 27 62 0 0 chr5 143954812 143954860 -55675290 + AT_rich Low_complexity Low_complexity 1 48 0 1313 297 112 9 chr5 143955959 143956609 -55673541 + L1MCc LINE L1 24 773 -5650 554 293 160 21 chr5 143956646 143956977 -55673173 - LTR16B LTR ERVL -87 377 1 295 395 93 28 chr5 143957295 143957768 -55672382 + L2 LINE L2 2312 2815 -499 983 261 121 21 chr5 143957772 143958060 -55672090 + MER63B DNA MER1_type 1 339 -723 1683 118 0 42 chr5 143958060 143958323 -55671827 - AluSg SINE Alu -14 296 45 983 261 121 21 chr5 143958323 143958421 -55671729 + MER63B DNA MER1_type 339 426 -10 300 380 7 7 chr5 143958468 143958610 -55671540 + L2 LINE L2 2867 3008 -264 271 342 13 0 chr5 143958614 143958693 -55671457 + L2 LINE L2 3190 3269 -3 6104 194 42 13 chr5 143959400 143960606 -55669544 - MER21-int LTR ERV1 -104 4087 2848 873 260 14 5 chr5 143960853 143961061 -55669089 + MER63A DNA MER1_type 1 210 0 384 361 76 38 chr5 143961786 143962207 -55667943 + L2 LINE L2 2028 2464 -850 367 228 25 0 chr5 143962823 143962902 -55667248 - L2 LINE L2 -75 3238 3158 328 378 45 22 chr5 143962979 143963201 -55666949 - MIR SINE MIR -10 252 26 391 346 143 30 chr5 143964967 143965464 -55664686 - L2 LINE L2 -932 2382 1830 189 74 0 0 chr5 143966590 143966617 -55663533 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1159 218 0 73 chr5 143966788 143967077 -55663073 - AluJo SINE Alu -44 268 1 614 337 132 26 chr5 143967242 143967660 -55662490 + L2 LINE L2 2852 3313 0 856 281 20 16 chr5 143967931 143968184 -55661966 - MIR SINE MIR -3 259 6 212 264 19 9 chr5 143969482 143969588 -55660562 + (TA)n Simple_repeat Simple_repeat 2 108 0 514 304 13 6 chr5 143969614 143969772 -55660378 - MIR SINE MIR -102 160 2 585 283 91 53 chr5 143970163 143970220 -55659930 + L2 LINE L2 2468 2521 -793 2366 83 34 9 chr5 143970220 143970569 -55659581 + L1PA7 LINE L1 5796 6153 -1 585 283 91 53 chr5 143970569 143970776 -55659374 + L2 LINE L2 2521 2742 -572 505 296 37 109 chr5 143970818 143971304 -55658846 + L2 LINE L2 2843 3293 -20 180 111 0 0 chr5 143971313 143971340 -55658810 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 305 274 75 52 chr5 143973699 143973951 -55656199 + MLT1L LTR MaLR 15 272 -343 305 242 32 11 chr5 143974141 143974236 -55655914 + MLT1L LTR MaLR 519 615 0 197 371 134 0 chr5 143975442 143975539 -55654611 + L2 LINE L2 3151 3260 -12 2039 126 14 0 chr5 143975600 143975894 -55654256 - AluSx SINE Alu -14 298 1 229 193 11 91 chr5 143977269 143977357 -55652793 + L1M4 LINE L1 4995 5075 -1071 5248 84 4 1 chr5 143977369 143978075 -55652075 - L1PA8A LINE L1 -8 6123 5416 208 239 22 22 chr5 143978205 143978297 -55651853 + (TTATA)n Simple_repeat Simple_repeat 2 93 0 231 334 24 32 chr5 143978779 143978905 -55651245 + MIR SINE MIR 20 151 -57 3470 157 26 43 chr5 143979214 143980031 -55650119 - L1MA9 LINE L1 -376 5936 5143 1233 211 21 77 chr5 143980004 143980393 -55649757 + L1MA9 LINE L1 5908 6274 -38 * 207 323 0 32 chr5 143981107 143981169 -55648981 - L2 LINE L2 -76 3196 3137 21 0 0 0 chr5 143981179 143981200 -55648950 + AT_rich Low_complexity Low_complexity 1 21 0 1567 217 47 96 chr5 143981205 143981647 -55648503 + MLT1D LTR MaLR 1 414 -91 644 233 7 20 chr5 143981647 143981793 -55648357 + U4 snRNA snRNA 1 144 -1 1567 217 47 96 chr5 143981793 143981881 -55648269 + MLT1D LTR MaLR 414 505 0 24 32 0 0 chr5 143981986 143982017 -55648133 + AT_rich Low_complexity Low_complexity 1 31 0 4932 145 24 17 chr5 143982235 143983129 -55647021 + L1MA4 LINE L1 5391 6290 -10 2474 74 0 0 chr5 143983181 143983492 -55646658 + AluY SINE Alu 1 311 0 245 306 171 36 chr5 143985144 143985284 -55644866 + MIR SINE MIR 8 128 -134 1546 213 83 69 chr5 143985284 143985791 -55644359 + MER67D LTR ERV1 1 514 0 245 306 171 36 chr5 143985791 143985872 -55644278 + MIR SINE MIR 128 259 -3 416 277 85 7 chr5 143987744 143987885 -55642265 - MER5B DNA MER1_type -23 155 4 3265 151 18 4 chr5 143988940 143989485 -55640665 - L1PA16 LINE L1 -200 5966 5414 299 154 0 0 chr5 143989481 143989533 -55640617 + L1 LINE L1 3899 3950 -2196 * 21 36 0 0 chr5 143989824 143989852 -55640298 + AT_rich Low_complexity Low_complexity 1 28 0 226 276 13 0 chr5 143990298 143990374 -55639776 + (TG)n Simple_repeat Simple_repeat 2 78 0 284 254 238 43 chr5 143990398 143990583 -55639567 + MIR SINE MIR 14 234 -28 2183 162 3 0 chr5 143990765 143991124 -55639026 + MER46B DNA MER2_type 2 236 0 411 175 0 72 chr5 143991197 143991294 -55638856 - AluSc SINE Alu -12 297 208 13430 165 51 26 chr5 143991309 143993001 -55637149 - L1PB1 LINE L1 -65 6802 5153 207 0 0 0 chr5 143993001 143993024 -55637126 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 13430 165 51 26 chr5 143993024 143994391 -55635759 - L1PB1 LINE L1 -1714 5153 3821 2003 129 3 7 chr5 143994391 143994686 -55635464 - AluSx SINE Alu -18 294 1 13430 165 51 26 chr5 143994686 143997646 -55632504 - L1PB1 LINE L1 -3046 3821 636 918 169 82 0 chr5 143997648 143997831 -55632319 - L1PB1 LINE L1 -6663 200 3 323 301 87 53 chr5 143998328 143998534 -55631616 + L1MEd LINE L1 723 935 -5595 275 311 39 11 chr5 143998629 143998809 -55631341 + L1MEd LINE L1 1089 1273 -5257 332 302 126 33 chr5 143998927 143999347 -55630803 + L1MEd LINE L1 1543 2001 -4539 428 137 0 118 chr5 143999672 143999774 -55630376 + L1PA15 LINE L1 5606 5695 -470 2437 137 8 10 chr5 143999781 144000167 -55629983 + L1PA15 LINE L1 5774 6158 -7 840 68 23 0 chr5 144000285 144000418 -55629732 + (TAGA)n Simple_repeat Simple_repeat 2 137 0 236 312 108 0 chr5 144001801 144001894 -55628256 + MIR SINE MIR 50 152 -110 1663 211 67 51 chr5 144002408 144002916 -55627234 - L1MB8 LINE L1 0 6178 5663 347 298 123 29 chr5 144003024 144003195 -55626955 + MIR SINE MIR 5 191 -71 1576 208 0 26 chr5 144003410 144003723 -55626427 + AluJb SINE Alu 1 305 -7 2167 132 42 22 chr5 144003945 144004302 -55625848 - THE1B LTR MaLR 0 364 1 1003 219 30 13 chr5 144004333 144004570 -55625580 - MIR SINE MIR -21 241 1 280 149 0 0 chr5 144005136 144005183 -55624967 - L1MA7 LINE L1 -66 6225 6179 566 246 120 30 chr5 144005481 144005648 -55624502 - MIR SINE MIR -73 189 8 2196 106 0 0 chr5 144006271 144006590 -55623560 + AluSc SINE Alu 1 319 0 264 315 18 109 chr5 144006790 144007130 -55623020 - L2 LINE L2 -38 3275 2967 1889 154 10 61 chr5 144007141 144007536 -55622614 - THE1C LTR MaLR 0 375 1 681 304 142 80 chr5 144007741 144008416 -55621734 - L2 LINE L2 -554 2760 2044 271 375 48 0 chr5 144009162 144009266 -55620884 + L2 LINE L2 3143 3251 -21 23 86 0 0 chr5 144011332 144011390 -55618760 + AT_rich Low_complexity Low_complexity 1 58 0 219 333 63 18 chr5 144012613 144012724 -55617426 + L3 LINE CR1 1448 1563 -14 250 411 16 0 chr5 144013156 144013285 -55616865 - L2 LINE L2 -10 3303 3173 249 108 0 0 chr5 144013645 144013682 -55616468 + (A)n Simple_repeat Simple_repeat 1 37 0 594 283 30 38 chr5 144013753 144013991 -55616159 + MIR SINE MIR 20 262 0 24 32 0 0 chr5 144015475 144015506 -55614644 + AT_rich Low_complexity Low_complexity 1 31 0 2469 96 14 8 chr5 144016319 144016672 -55613478 - THE1A LTR MaLR 0 355 1 11470 100 4 7 chr5 144016672 144018257 -55611893 - THE1A-int LTR MaLR 0 1580 1 2468 113 6 3 chr5 144018257 144018611 -55611539 - THE1A LTR MaLR 0 355 1 253 168 56 40 chr5 144018617 144018742 -55611408 + (TTTAA)n Simple_repeat Simple_repeat 5 131 0 28 0 0 26 chr5 144019619 144019640 -55610510 + AT_rich Low_complexity Low_complexity 1 22 -16 899 231 5 0 chr5 144019640 144019856 -55610294 + L1MB4 LINE L1 5958 6174 -6 28 0 0 26 chr5 144019856 144019873 -55610277 + AT_rich Low_complexity Low_complexity 22 38 0 345 158 61 12 chr5 144019875 144019957 -55610193 + L1MB8 LINE L1 6093 6178 0 1490 217 7 14 chr5 144022131 144022426 -55607724 - AluJo SINE Alu -19 293 1 25 51 0 0 chr5 144022488 144022527 -55607623 + AT_rich Low_complexity Low_complexity 1 39 0 22 94 0 0 chr5 144022559 144022623 -55607527 + AT_rich Low_complexity Low_complexity 1 64 0 14427 224 26 12 chr5 144022931 144028478 -55601672 + L1PA16 LINE L1 1180 6814 -3 329 312 121 0 chr5 144030056 144030213 -55599937 + L1M4 LINE L1 2217 2392 -3754 1978 182 20 10 chr5 144030223 144030624 -55599526 + L1PA16 LINE L1 5762 6166 0 365 302 15 20 chr5 144031068 144031270 -55598880 + L1M4 LINE L1 4516 4716 -1430 494 246 137 47 chr5 144031642 144031919 -55598231 + L1M4 LINE L1 5022 5323 -823 10547 190 39 16 chr5 144033333 144033346 -55596804 - L1P4 LINE L1 -561 5602 5591 716 168 20 13 chr5 144033346 144033495 -55596655 - L1PA13 LINE L1 -4 6159 6010 10547 190 39 16 chr5 144033495 144036059 -55594091 - L1P4 LINE L1 -572 5591 2957 35 63 0 0 chr5 144037455 144037518 -55592632 + AT_rich Low_complexity Low_complexity 1 63 0 2323 93 0 3 chr5 144037735 144038046 -55592104 - AluSg SINE Alu 0 310 1 225 344 140 21 chr5 144038219 144038405 -55591745 - MIR SINE MIR 0 262 55 2203 125 11 22 chr5 144039195 144039554 -55590596 + THE1A LTR MaLR 1 355 0 583 239 99 21 chr5 144039925 144040067 -55590083 - MIR SINE MIR -69 193 41 13242 149 44 8 chr5 144040342 144042673 -55587477 - Tigger1 DNA MER2_type -1 2417 3 2259 99 3 0 chr5 144042867 144043160 -55586990 - AluSc SINE Alu -15 294 1 1840 139 7 33 chr5 144043423 144043726 -55586424 - AluSx SINE Alu -17 295 1 262 322 0 23 chr5 144045050 144045137 -55585013 + L2 LINE L2 3184 3268 -4 249 33 0 0 chr5 144045704 144045734 -55584416 + (CA)n Simple_repeat Simple_repeat 1 30 0 855 273 66 35 chr5 144045751 144046040 -55584110 + MLT1G1 LTR MaLR 62 359 -236 354 213 0 53 chr5 144046101 144046195 -55583955 + MLT1G1 LTR MaLR 451 539 -3 27 49 0 0 chr5 144046551 144046592 -55583558 + AT_rich Low_complexity Low_complexity 1 41 0 2108 184 35 6 chr5 144046592 144047075 -55583075 - L1PB4 LINE L1 -3 6153 5657 16490 119 1 6 chr5 144047080 144048308 -55581842 + L1PA8A LINE L1 2710 3942 -2189 2390 69 0 3 chr5 144048308 144048596 -55581554 + AluY SINE Alu 16 302 -9 16490 119 1 6 chr5 144048596 144050777 -55579373 + L1PA8A LINE L1 3942 6130 -1 457 304 61 28 chr5 144051071 144051318 -55578832 + MIR SINE MIR 7 261 -1 219 188 0 0 chr5 144052071 144052119 -55578031 + (TA)n Simple_repeat Simple_repeat 1 48 0 920 216 12 122 chr5 144052140 144052459 -55577691 - MLT2B1 LTR ERVL -60 460 177 2279 178 31 28 chr5 144052460 144053174 -55576976 - L1M2 LINE L1 -726 5565 4836 * 2567 175 44 16 chr5 144053173 144053693 -55576457 - L1M2 LINE L1 -1932 4214 3677 324 0 0 0 chr5 144053693 144053729 -55576421 + (TG)n Simple_repeat Simple_repeat 2 37 0 2567 175 44 16 chr5 144053729 144053756 -55576394 - L1M2 LINE L1 -2469 3677 3652 969 252 55 58 chr5 144053760 144053828 -55576322 - L1ME LINE L1 -436 5734 5667 1210 205 128 0 chr5 144053828 144054125 -55576025 - MER44D DNA MER2_type -4 605 1 969 252 55 58 chr5 144054125 144054435 -55575715 - L1ME LINE L1 -503 5667 5356 1958 148 10 0 chr5 144054435 144054725 -55575425 - AluSx SINE Alu -19 293 1 969 252 55 58 chr5 144054725 144054947 -55575203 - L1ME LINE L1 -814 5356 5135 193 143 20 20 chr5 144055129 144055178 -55574972 + (TA)n Simple_repeat Simple_repeat 2 50 0 1551 321 82 15 chr5 144056025 144056764 -55573386 + L2 LINE L2 1789 2577 -737 1138 274 29 112 chr5 144056765 144057356 -55572794 + MLT1H1 LTR MaLR 10 551 -4 1036 278 56 36 chr5 144057361 144057774 -55572376 + L2 LINE L2 2577 2997 -316 318 270 66 41 chr5 144057942 144058138 -55572012 + L2 LINE L2 2985 3185 -128 399 285 61 19 chr5 144058289 144058503 -55571647 - L1ME3A LINE L1 -310 5860 5638 251 308 53 45 chr5 144060680 144060813 -55569337 + MER5B DNA MER1_type 2 135 -43 2019 139 134 11 chr5 144061155 144061536 -55568614 - MSTA LTR MaLR 0 428 1 1108 235 90 42 chr5 144062673 144063051 -55567099 - MSTD LTR MaLR 0 396 1 8048 199 32 29 chr5 144063894 144064038 -55566112 + L1MA2 LINE L1 12 154 -7411 2388 88 0 0 chr5 144064038 144064343 -55565807 - AluY SINE Alu -6 305 1 8048 199 32 29 chr5 144064343 144065868 -55564282 + L1MA2 LINE L1 154 1686 -5879 14094 171 23 13 chr5 144065870 144067071 -55563079 + L1MA2 LINE L1 2850 4037 -3686 2033 150 11 8 chr5 144067071 144067425 -55562725 - THE1A LTR MaLR 0 355 1 14094 171 23 13 chr5 144067425 144071048 -55559102 + L1MA2 LINE L1 4037 7723 0 305 307 47 62 chr5 144071338 144071530 -55558620 - MIR3 SINE MIR -6 202 14 361 310 127 0 chr5 144072204 144072346 -55557804 + MER91A DNA MER1_type 1 160 -36 1343 234 19 40 chr5 144073324 144073495 -55556655 + MLT1A2 LTR MaLR 4 177 -197 201 39 0 0 chr5 144073495 144073521 -55556629 + (TC)n Simple_repeat Simple_repeat 1 26 0 1343 234 19 40 chr5 144073521 144073721 -55556429 + MLT1A2 LTR MaLR 177 367 -7 205 384 12 0 chr5 144074350 144074436 -55555714 + MIR SINE MIR 170 256 -6 185 347 63 11 chr5 144074648 144074743 -55555407 - L3 LINE CR1 -707 870 771 276 329 50 31 chr5 144074942 144075103 -55555047 - L3 LINE CR1 -819 758 595 343 330 121 29 chr5 144075744 144075950 -55554200 - L3 LINE CR1 -1106 471 247 288 315 0 54 chr5 144076068 144076160 -55553990 - MIR SINE MIR -91 117 31 416 290 48 14 chr5 144077550 144077695 -55552455 - MIR SINE MIR -84 178 29 1971 186 88 8 chr5 144077706 144078150 -55552000 + L1MA9 LINE L1 5831 6306 -6 332 295 25 25 chr5 144079157 144079279 -55550871 + L2 LINE L2 3192 3313 0 973 219 97 17 chr5 144079673 144079911 -55550239 + AluJb SINE Alu 3 259 -53 192 77 0 0 chr5 144080055 144080081 -55550069 + (TG)n Simple_repeat Simple_repeat 2 27 0 1108 234 91 39 chr5 144081865 144082315 -55547835 + MER66A LTR ERV1 173 478 0 226 275 295 0 chr5 144082904 144083053 -55547097 + MIR SINE MIR 63 255 -7 22 35 0 0 chr5 144083488 144083517 -55546633 + AT_rich Low_complexity Low_complexity 1 29 0 573 167 105 18 chr5 144084218 144084332 -55545818 + FLAM_C SINE Alu 1 124 -19 228 213 33 33 chr5 144084503 144084564 -55545586 + (CATATA)n Simple_repeat Simple_repeat 1 61 0 610 317 90 31 chr5 144084635 144084957 -55545193 + MER102b DNA MER1_type 1 341 0 515 290 29 0 chr5 144085122 144085260 -55544890 - MIR3 SINE MIR -37 171 30 188 269 104 30 chr5 144085910 144085977 -55544173 + L3 LINE CR1 290 361 -1216 1167 207 33 4 chr5 144086454 144086725 -55543425 + L1MD3 LINE L1 7717 7995 0 2189 121 3 0 chr5 144087602 144087909 -55542241 + AluSx SINE Alu 1 308 -4 997 31 79 0 chr5 144088271 144088398 -55541752 + MER85 DNA T2_type 1 137 -2 213 347 42 53 chr5 144088403 144088593 -55541557 - L2 LINE L2 -258 3014 2827 29 0 0 0 chr5 144088881 144088910 -55541240 + AT_rich Low_complexity Low_complexity 1 29 0 910 164 6 6 chr5 144089363 144089528 -55540622 - L1PA15 LINE L1 0 6165 6001 51 53 0 46 chr5 144089691 144089822 -55540328 + AT_rich Low_complexity Low_complexity 1 125 0 2795 7 0 0 chr5 144090972 144091278 -55538872 + AluYa5 SINE Alu 1 306 -5 2402 135 5 0 chr5 144091843 144092213 -55537937 - L1PA14 LINE L1 -5 6156 5785 226 280 0 0 chr5 144092558 144092608 -55537542 - LTR26B LTR ERV1 -268 263 214 721 221 55 98 chr5 144093011 144093090 -55537060 + L1MC4 LINE L1 7706 7787 -208 856 131 0 29 chr5 144093090 144093227 -55536923 - FLAM_C SINE Alu 0 133 1 1845 168 10 0 chr5 144093230 144093528 -55536622 - AluSx SINE Alu -9 303 3 721 221 55 98 chr5 144093528 144093810 -55536340 + L1MC4 LINE L1 7789 7995 0 252 0 0 0 chr5 144093943 144093971 -55536179 + (CA)n Simple_repeat Simple_repeat 2 29 0 1441 284 163 33 chr5 144094762 144095796 -55534354 + L2 LINE L2 2110 3302 -11 22 0 0 0 chr5 144097245 144097267 -55532883 + AT_rich Low_complexity Low_complexity 1 22 0 309 117 0 0 chr5 144098733 144098793 -55531357 + (TA)n Simple_repeat Simple_repeat 2 61 0 257 192 41 14 chr5 144098832 144098905 -55531245 + (TA)n Simple_repeat Simple_repeat 2 76 0 1417 185 116 12 chr5 144101592 144101938 -55528212 + MER58D DNA MER1_type 4 385 -1 1080 195 5 0 chr5 144101941 144102146 -55528004 + L1MB1 LINE L1 5912 6117 -51 645 117 78 0 chr5 144102159 144102262 -55527888 + AluSc SINE Alu 1 111 -198 23 54 0 0 chr5 144103526 144103563 -55526587 + AT_rich Low_complexity Low_complexity 1 37 0 2217 108 5 32 chr5 144104203 144104573 -55525577 - L1MA3 LINE L1 0 6305 5946 417 293 60 0 chr5 144104850 144104983 -55525167 + MIR SINE MIR 18 158 -104 22 35 0 0 chr5 144105326 144105355 -55524795 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr5 144105440 144105477 -55524673 + AT_rich Low_complexity Low_complexity 1 37 0 1201 147 4 42 chr5 144106062 144106132 -55524018 + L1MA6 LINE L1 6072 6143 -157 2146 85 0 37 chr5 144106132 144106426 -55523724 + AluY SINE Alu 1 283 -28 7265 51 0 1 chr5 144106426 144107376 -55522774 + L1PA5 LINE L1 5206 6154 0 1201 147 4 42 chr5 144107376 144107542 -55522608 + L1MA6 LINE L1 6141 6300 0 446 377 39 10 chr5 144107827 144108034 -55522116 + LTR16A LTR ERVL 117 329 -121 26 64 0 0 chr5 144108164 144108211 -55521939 + AT_rich Low_complexity Low_complexity 1 47 0 2045 111 4 0 chr5 144108629 144108908 -55521242 - AluSx SINE Alu -6 306 27 238 355 13 0 chr5 144109202 144109278 -55520872 + L2 LINE L2 3160 3236 -36 21 36 0 0 chr5 144109292 144109320 -55520830 + AT_rich Low_complexity Low_complexity 1 28 0 943 285 45 59 chr5 144110112 144110466 -55519684 - MLT1J LTR MaLR -156 355 7 449 323 35 39 chr5 144110791 144111020 -55519130 - MIR SINE MIR -9 253 26 208 222 111 42 chr5 144111156 144111228 -55518922 - MIR SINE MIR -90 118 42 25 31 0 0 chr5 144111803 144111835 -55518315 + AT_rich Low_complexity Low_complexity 1 32 0 288 77 0 0 chr5 144112524 144112563 -55517587 + (TG)n Simple_repeat Simple_repeat 2 40 0 2077 131 3 3 chr5 144112601 144112906 -55517244 - AluSx SINE Alu -7 305 1 264 30 0 0 chr5 144112906 144112939 -55517211 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 1829 206 23 10 chr5 144113661 144114050 -55516100 + MSTD LTR MaLR 1 394 -2 3046 228 25 25 chr5 144114054 144114788 -55515362 + MSTD-int LTR MaLR 2 735 -1000 658 311 135 34 chr5 144114896 144114990 -55515160 - L2 LINE L2 0 3313 3230 2285 93 0 3 chr5 144114990 144115290 -55514860 + AluSg SINE Alu 1 299 -11 658 311 135 34 chr5 144115290 144115639 -55514511 - L2 LINE L2 -83 3230 2825 467 294 58 71 chr5 144115814 144116364 -55513786 + MER41E LTR ERV1 118 489 -23 369 260 67 110 chr5 144120784 144121130 -55509020 - MLT1J LTR MaLR -177 334 4 22 0 0 0 chr5 144121365 144121387 -55508763 + AT_rich Low_complexity Low_complexity 1 22 0 428 221 24 135 chr5 144122231 144122439 -55507711 + MLT1J LTR MaLR 230 414 -97 401 159 0 0 chr5 144122441 144122504 -55507646 + L1M1 LINE L1 5418 5480 -825 264 274 32 0 chr5 144123064 144123159 -55506991 - L1MC4 LINE L1 -1333 6709 6612 229 286 0 0 chr5 144123161 144123210 -55506940 + (CATA)n Simple_repeat Simple_repeat 1 49 0 1181 46 20 0 chr5 144124869 144125020 -55505130 + L1PA4 LINE L1 6001 6154 -1 3135 42 0 0 chr5 144125023 144125406 -55504744 + L1PA3 LINE L1 5770 6152 -3 235 250 142 95 chr5 144126249 144126276 -55503874 - MIR SINE MIR -63 145 121 329 167 56 0 chr5 144126276 144126348 -55503802 + MER116 DNA Mariner 1 76 -4 235 250 142 95 chr5 144126348 144126468 -55503682 - MIR SINE MIR -87 121 14 30 45 0 0 chr5 144126667 144126711 -55503439 + AT_rich Low_complexity Low_complexity 1 44 0 482 298 62 0 chr5 144126816 144126994 -55503156 - L1ME LINE L1 -399 5722 5534 2278 61 0 0 chr5 144127062 144127342 -55502808 - AluY SINE Alu 0 311 32 195 42 0 0 chr5 144127613 144127637 -55502513 + (TG)n Simple_repeat Simple_repeat 2 25 0 22 88 0 0 chr5 144128121 144128178 -55501972 + AT_rich Low_complexity Low_complexity 1 57 0 1003 282 11 45 chr5 144128567 144129179 -55500971 + L1MD1 LINE L1 21 657 -5883 5095 210 81 115 chr5 144129180 144129720 -55500430 + L1MD1 LINE L1 1023 1580 -4960 1586 87 0 30 chr5 144129720 144129951 -55500199 + AluSp SINE Alu 84 307 -6 5095 210 81 115 chr5 144129951 144131359 -55498791 + L1MD1 LINE L1 1580 3035 -3505 2164 115 3 3 chr5 144131359 144131663 -55498487 + AluSg SINE Alu 1 304 -6 5095 210 81 115 chr5 144131663 144133427 -55496723 + L1MD1 LINE L1 3035 4807 -1733 841 220 134 48 chr5 144133427 144133718 -55496432 - MER2 DNA MER2_type -24 321 6 5095 210 81 115 chr5 144133718 144134619 -55495531 + L1MD1 LINE L1 4807 5737 -803 479 155 12 0 chr5 144134619 144134703 -55495447 + FLAM SINE Alu 48 132 -11 4501 195 22 2 chr5 144134703 144135596 -55494554 + L1MD1 LINE L1 5726 6636 0 5059 121 15 1 chr5 144135678 144136469 -55493681 + L1PB2 LINE L1 5343 6144 -7 1190 227 54 14 chr5 144136647 144136747 -55493403 + AluJb SINE Alu 21 116 -196 405 0 0 0 chr5 144136747 144136792 -55493358 + (CA)n Simple_repeat Simple_repeat 1 45 0 1190 227 54 14 chr5 144136792 144136969 -55493181 + AluJb SINE Alu 116 309 -3 1954 152 0 9 chr5 144137204 144137519 -55492631 + AluSx SINE Alu 1 312 0 183 80 0 0 chr5 144137539 144137564 -55492586 + (GGAA)n Simple_repeat Simple_repeat 4 28 0 594 0 0 0 chr5 144137564 144137630 -55492520 + (GGAAA)n Simple_repeat Simple_repeat 2 67 0 38442 42 2 1 chr5 144137851 144143399 -55486751 + L1PA4 LINE L1 606 6155 0 25 65 0 0 chr5 144144111 144144157 -55485993 + AT_rich Low_complexity Low_complexity 1 46 0 436 133 54 40 chr5 144144382 144144746 -55485404 + (TA)n Simple_repeat Simple_repeat 1 369 0 29 0 0 0 chr5 144145294 144145323 -55484827 + AT_rich Low_complexity Low_complexity 1 29 0 473 240 45 28 chr5 144145853 144146040 -55484110 + MLT1I LTR MaLR 247 402 -7 3900 134 13 0 chr5 144146303 144146914 -55483236 + L1PA16 LINE L1 5539 6157 -9 1744 135 64 4 chr5 144147618 144147899 -55482251 + AluSx SINE Alu 1 298 -14 21 36 0 0 chr5 144148114 144148142 -55482008 + AT_rich Low_complexity Low_complexity 1 28 0 643 171 18 0 chr5 144148822 144148933 -55481217 - AluSg/x SINE Alu -78 234 122 25 31 0 0 chr5 144149490 144149522 -55480628 + AT_rich Low_complexity Low_complexity 1 32 0 209 320 77 0 chr5 144150507 144150585 -55479565 + MIR SINE MIR 176 259 -3 359 276 117 25 chr5 144150894 144151090 -55479060 - L2 LINE L2 0 3313 3100 2705 271 153 46 chr5 144151202 144152455 -55477695 - L2 LINE L2 -392 2922 1536 542 275 22 11 chr5 144153105 144153287 -55476863 + L2 LINE L2 3115 3298 -15 1468 198 4 0 chr5 144153294 144153557 -55476593 - AluJo SINE Alu -14 298 35 286 277 15 36 chr5 144153591 144153728 -55476422 + GA-rich Low_complexity Low_complexity 2 135 0 487 215 178 0 chr5 144153856 144153991 -55476159 + MIR SINE MIR 100 258 -4 222 37 0 0 chr5 144153995 144154022 -55476128 + (CAT)n Simple_repeat Simple_repeat 2 28 0 815 175 82 0 chr5 144154638 144154809 -55475341 + MER20 DNA MER1_type 35 219 0 1171 274 75 50 chr5 144154835 144155411 -55474739 + L2 LINE L2 2702 3313 0 622 302 83 21 chr5 144155443 144155685 -55474465 - MIR SINE MIR -2 260 4 321 294 11 0 chr5 144158019 144158111 -55472039 + L1ME4a LINE L1 5526 5618 -503 693 291 50 4 chr5 144158154 144158395 -55471755 + MIR SINE MIR 8 259 -3 389 272 51 13 chr5 144158592 144158750 -55471400 + L1ME4a LINE L1 5956 6119 -2 1342 220 0 26 chr5 144159418 144159722 -55470428 + AluJo SINE Alu 1 296 -16 261 366 49 24 chr5 144160922 144161045 -55469105 + L2 LINE L2 3139 3264 -8 24 0 0 0 chr5 144161616 144161640 -55468510 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr5 144163327 144163360 -55466790 + GC_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 144164088 144164109 -55466041 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr5 144166194 144166232 -55463918 + AT_rich Low_complexity Low_complexity 1 38 0 2192 114 0 0 chr5 144166522 144166820 -55463330 + AluSg1 SINE Alu 1 298 -11 342 67 0 0 chr5 144167625 144167670 -55462480 + (TG)n Simple_repeat Simple_repeat 2 46 0 1912 111 13 29 chr5 144167774 144168080 -55462070 - THE1C LTR MaLR -74 301 1 543 239 153 6 chr5 144168154 144168317 -55461833 - MER5A DNA MER1_type 0 189 3 191 349 9 28 chr5 144168664 144168773 -55461377 + L2 LINE L2 3207 3313 0 1588 217 46 3 chr5 144169007 144169353 -55460797 + MLT1A1 LTR MaLR 3 363 -2 267 247 41 27 chr5 144169779 144169852 -55460298 + MER91B DNA MER1_type 52 125 -65 269 333 0 45 chr5 144169868 144169979 -55460171 + MER91B DNA MER1_type 84 189 -1 261 0 0 0 chr5 144170100 144170129 -55460021 + (TA)n Simple_repeat Simple_repeat 1 29 0 6428 123 21 22 chr5 144170159 144171166 -55458984 + LTR13 LTR ERVK 1 1006 -1 705 224 0 46 chr5 144172224 144172398 -55457752 + MLT1A2 LTR MaLR 1 166 -208 202 315 0 0 chr5 144172938 144172992 -55457158 + CT-rich Low_complexity Low_complexity 4 57 0 414 0 0 0 chr5 144173158 144173204 -55456946 + (TG)n Simple_repeat Simple_repeat 2 47 0 1832 166 14 0 chr5 144173611 144173901 -55456249 + AluSx SINE Alu 3 296 -16 256 290 48 8 chr5 144175247 144175371 -55454779 + LTR33 LTR ERVL 393 521 0 21 36 0 0 chr5 144175948 144175976 -55454174 + AT_rich Low_complexity Low_complexity 1 28 0 1133 226 9 50 chr5 144177165 144177484 -55452666 + MER52A LTR ERV1 1 306 -1449 2852 178 40 8 chr5 144177486 144177992 -55452158 + MER52A LTR ERV1 1234 1755 0 204 309 59 0 chr5 144178311 144178379 -55451771 + L2 LINE L2 3182 3253 -19 449 275 109 0 chr5 144178398 144178536 -55451614 - LTR16A1 LTR ERVL 0 457 305 * 1482 214 27 54 chr5 144178533 144178906 -55451244 - MLT1A2 LTR MaLR -11 363 1 207 0 0 0 chr5 144179983 144180006 -55450144 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1937 124 0 7 chr5 144180008 144180283 -55449867 - AluSx SINE Alu -31 281 9 535 271 61 28 chr5 144181004 144181218 -55448932 - MIR SINE MIR -21 241 21 211 306 28 0 chr5 144181300 144181372 -55448778 + MIR3 SINE MIR 110 183 -25 261 0 0 0 chr5 144182360 144182389 -55447761 + (T)n Simple_repeat Simple_repeat 1 29 0 783 261 97 48 chr5 144182422 144182774 -55447376 + LTR33A LTR ERVL 130 498 -25 667 220 170 45 chr5 144183043 144183243 -55446907 - MLT1A1 LTR MaLR -140 225 1 4259 224 83 31 chr5 144183684 144185066 -55445084 - Charlie1a DNA MER1_type -1 1454 1 764 216 100 0 chr5 144185392 144185582 -55444568 - MER3 DNA MER1_type 0 209 1 202 240 60 0 chr5 144187233 144187283 -55442867 + L2 LINE L2 3175 3227 -86 24 0 0 0 chr5 144187421 144187445 -55442705 + AT_rich Low_complexity Low_complexity 1 24 0 517 154 7 28 chr5 144187744 144187887 -55442263 + (TA)n Simple_repeat Simple_repeat 2 141 0 414 291 94 35 chr5 144188056 144188259 -55441891 + L2 LINE L2 3099 3313 0 198 263 50 12 chr5 144188403 144188483 -55441667 - MIR SINE MIR -64 144 62 1201 289 107 25 chr5 144188483 144188960 -55441190 + L1M4b LINE L1 13 528 -6331 21 36 0 0 chr5 144188963 144188991 -55441159 + AT_rich Low_complexity Low_complexity 1 28 0 343 264 34 96 chr5 144189168 144189346 -55440804 - MER57A LTR ERV1 -195 208 42 735 314 95 45 chr5 144189353 144190151 -55439999 - HAL1 LINE L1 -155 2352 1515 402 21 0 0 chr5 144190363 144190410 -55439740 + (T)n Simple_repeat Simple_repeat 1 47 0 27 0 0 0 chr5 144190999 144191026 -55439124 + AT_rich Low_complexity Low_complexity 1 27 0 1402 96 0 0 chr5 144191206 144191393 -55438757 - AluSg/x SINE Alu 0 312 126 2657 51 6 0 chr5 144191393 144191726 -55438424 - L1PA7 LINE L1 -1 6153 5819 489 283 129 40 chr5 144191726 144191958 -55438192 - HAL1 LINE L1 -1176 1331 1121 2168 125 0 3 chr5 144191958 144192262 -55437888 - AluSx SINE Alu -9 303 1 489 283 129 40 chr5 144192262 144192531 -55437619 - HAL1 LINE L1 -1386 1121 785 267 259 195 12 chr5 144192559 144192710 -55437440 + MER5A DNA MER1_type 7 189 0 415 332 125 33 chr5 144192937 144193241 -55436909 - HAL1 LINE L1 -2153 354 23 309 247 120 20 chr5 144194065 144194215 -55435935 - MER103 DNA DNA -1 165 1 4839 154 48 85 chr5 144195411 144196500 -55433650 - L1MC1 LINE L1 -18 6315 5268 772 163 115 108 chr5 144197048 144197336 -55432814 - MLT1A1 LTR MaLR -75 290 1 898 288 62 27 chr5 144197350 144197687 -55432463 + L1P3 LINE L1 17 365 -6096 23596 181 11 18 chr5 144197704 144202517 -55427633 + L1P3 LINE L1 852 5649 -812 41840 41 22 2 chr5 144202519 144208544 -55421606 + L1PA3 LINE L1 5 6155 0 1434 91 14 3 chr5 144208531 144208761 -55421389 + L1P4 LINE L1 5290 5519 -649 * 235 116 93 0 chr5 144208773 144208816 -55421334 + L1PA10 LINE L1 4951 4997 -1149 4590 95 3 5 chr5 144208819 144209459 -55420691 + L1PA10 LINE L1 5528 6166 -2 247 249 119 99 chr5 144210186 144210540 -55419610 + LTR52 LTR ERVL 3 363 -58 273 237 0 14 chr5 144213404 144213470 -55416680 + HERVL LTR ERVL 4290 4340 -1314 275 294 86 43 chr5 144213505 144213692 -55416458 + HERVL LTR ERVL 4421 4615 -1039 243 88 0 0 chr5 144214749 144214783 -55415367 + (TG)n Simple_repeat Simple_repeat 2 35 0 5583 122 17 34 chr5 144215244 144216019 -55414131 - L1PA15 LINE L1 -19 6146 5387 1807 91 0 0 chr5 144216019 144216249 -55413901 - AluSg/x SINE Alu -1 311 82 5583 122 17 34 chr5 144216249 144216407 -55413743 - L1PA15 LINE L1 -778 5387 5228 27 0 0 0 chr5 144216714 144216741 -55413409 + AT_rich Low_complexity Low_complexity 1 27 0 620 246 59 9 chr5 144216757 144216977 -55413173 + L1M4 LINE L1 3673 3903 -2243 242 200 0 0 chr5 144217021 144217076 -55413074 + L1M4 LINE L1 3981 4035 -2111 1890 246 87 11 chr5 144217083 144217815 -55412335 + L1M4 LINE L1 4135 4922 -1224 3092 173 18 58 chr5 144218470 144219087 -55411063 - L1M1 LINE L1 -6965 600 9 2240 146 8 13 chr5 144219113 144219490 -55410660 - THE1C LTR MaLR 0 375 1 2688 26 3 0 chr5 144219532 144219840 -55410310 - AluY SINE Alu -2 309 1 22 35 0 0 chr5 144219960 144219989 -55410161 + AT_rich Low_complexity Low_complexity 1 29 0 252 143 0 0 chr5 144220491 144220533 -55409617 + (CA)n Simple_repeat Simple_repeat 2 43 0 858 350 62 53 chr5 144220718 144221477 -55408673 + HERVL LTR ERVL 4027 4792 -862 2098 130 72 20 chr5 144221533 144221879 -55408271 - THE1B LTR MaLR 0 364 1 11331 110 8 0 chr5 144221879 144223447 -55406703 - THE1B-int LTR MaLR 0 1580 1 2069 144 72 20 chr5 144223447 144223793 -55406357 - THE1B LTR MaLR 0 364 1 203 377 88 18 chr5 144224374 144224488 -55405662 + L2 LINE L2 3150 3271 -1 21 36 0 0 chr5 144224565 144224593 -55405557 + AT_rich Low_complexity Low_complexity 1 28 0 1630 247 26 13 chr5 144224687 144225076 -55405074 + MSTD LTR MaLR 1 394 -2 5104 212 55 31 chr5 144225765 144227713 -55402437 - L1MB8 LINE L1 0 6178 4279 1990 144 3 0 chr5 144227713 144228044 -55402106 - AluSx SINE Alu 0 332 1 5104 212 55 31 chr5 144228044 144228250 -55401900 - L1MB8 LINE L1 -1899 4279 4080 2294 93 0 13 chr5 144228250 144228551 -55401599 - AluY SINE Alu -14 297 1 5104 212 55 31 chr5 144228551 144228768 -55401382 - L1MB8 LINE L1 -2098 4080 3750 23 54 0 0 chr5 144228774 144228811 -55401339 + AT_rich Low_complexity Low_complexity 1 37 0 2743 103 0 5 chr5 144229018 144229395 -55400755 - THE1C LTR MaLR 0 375 1 8943 129 57 39 chr5 144229395 144230947 -55399203 - THE1C-int LTR MaLR 0 1580 1 2529 117 11 11 chr5 144230947 144231322 -55398828 - THE1C LTR MaLR 0 375 1 453 351 65 25 chr5 144231477 144231722 -55398428 - L2 LINE L2 -494 2820 2566 192 40 0 0 chr5 144233500 144233525 -55396625 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 252 299 69 0 chr5 144233881 144233968 -55396182 + LTR67 LTR ERVL 96 188 -369 2509 117 6 3 chr5 144234258 144234617 -55395533 + THE1B LTR MaLR 1 360 -4 4478 174 22 27 chr5 144234642 144235904 -55394246 - L1MB1 LINE L1 -8 6160 4901 821 270 38 4 chr5 144236010 144236381 -55393769 + LTR16C LTR ERVL 71 491 0 258 341 30 30 chr5 144236534 144236669 -55393481 + MIR SINE MIR 20 154 -108 202 310 17 0 chr5 144237544 144237602 -55392548 - L2 LINE L2 -4 3309 3251 1414 220 31 22 chr5 144237648 144238007 -55392143 - MLT1A1 LTR MaLR 0 365 4 414 349 124 30 chr5 144238516 144238975 -55391175 - L2 LINE L2 -994 2320 1819 857 83 8 0 chr5 144239232 144239353 -55390797 + L1MA1 LINE L1 6181 6302 0 1716 188 34 8 chr5 144239621 144239977 -55390173 + MLT1A1 LTR MaLR 1 365 0 764 234 126 31 chr5 144239977 144240408 -55389742 - Charlie2 DNA MER1_type -30 2832 2336 2038 112 35 3 chr5 144240408 144240695 -55389455 - AluSx SINE Alu -16 296 1 764 234 126 31 chr5 144240695 144240813 -55389337 - Charlie2 DNA MER1_type -526 2336 2231 728 302 8 16 chr5 144241951 144242199 -55387951 - LTR16B LTR ERVL 0 464 219 1056 165 114 33 chr5 144242211 144242440 -55387710 + MLT1A1 LTR MaLR 1 248 -117 1789 184 34 14 chr5 144242465 144242823 -55387327 + MLT1A1 LTR MaLR 1 365 0 2390 60 3 0 chr5 144243084 144243391 -55386759 + AluSp SINE Alu 1 308 0 308 303 95 29 chr5 144244080 144244321 -55385829 - HAL1 LINE L1 -6 2501 2245 1925 140 0 53 chr5 144244400 144244721 -55385429 + AluSx SINE Alu 1 304 -8 300 27 0 0 chr5 144244862 144244899 -55385251 + (GA)n Simple_repeat Simple_repeat 2 38 0 312 309 17 20 chr5 144245074 144245249 -55384901 + MIR SINE MIR 29 258 -4 231 327 31 25 chr5 144245438 144245600 -55384550 + L1ME LINE L1 5505 5667 -454 180 134 15 45 chr5 144245819 144245886 -55384264 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 1517 223 79 13 chr5 144246532 144246923 -55383227 - MER47B DNA MER2_type 0 418 2 23 0 0 0 chr5 144246947 144246970 -55383180 + AT_rich Low_complexity Low_complexity 1 23 0 13669 150 20 12 chr5 144247117 144249261 -55380889 + Tigger1 DNA MER2_type 56 2223 -195 2365 69 0 33 chr5 144249261 144249565 -55380585 - AluY SINE Alu -17 294 1 13669 150 20 12 chr5 144249565 144249763 -55380387 + Tigger1 DNA MER2_type 2223 2418 0 2387 130 3 19 chr5 144249764 144250134 -55380016 - THE1B LTR MaLR 0 364 1 9810 83 5 147 chr5 144250134 144251975 -55378175 - THE1B-int LTR MaLR 0 1580 1 2213 141 8 19 chr5 144251975 144252343 -55377807 - THE1B LTR MaLR 0 364 1 27 29 0 0 chr5 144252385 144252419 -55377731 + AT_rich Low_complexity Low_complexity 1 34 0 2138 171 10 3 chr5 144252425 144252811 -55377339 + MLT1B LTR MaLR 2 390 0 201 121 0 0 chr5 144253410 144253443 -55376707 + (TA)n Simple_repeat Simple_repeat 2 34 0 34 55 0 0 chr5 144253962 144254017 -55376133 + AT_rich Low_complexity Low_complexity 1 55 0 388 283 42 17 chr5 144255874 144255994 -55374156 - L2 LINE L2 0 3272 3150 1869 139 3 27 chr5 144257847 144258148 -55372002 - AluSx SINE Alu 0 312 19 26 0 0 0 chr5 144258354 144258380 -55371770 + AT_rich Low_complexity Low_complexity 1 26 0 196 327 0 18 chr5 144258963 144259018 -55371132 + MIR SINE MIR 20 73 -135 3607 207 3 3 chr5 144259020 144259787 -55370363 + L1 LINE L1 4088 4854 -1292 5271 196 92 100 chr5 144260022 144261792 -55368358 - MER52A LTR ERV1 0 1755 1 30 0 0 0 chr5 144262164 144262194 -55367956 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 144262745 144262778 -55367372 + AT_rich Low_complexity Low_complexity 1 33 0 769 225 163 18 chr5 144263357 144263584 -55366566 + MER76 LTR ERV 1 260 -428 1590 174 36 0 chr5 144263617 144263893 -55366257 + LOR1b LTR ERV1 176 461 0 599 260 173 34 chr5 144263893 144264214 -55365936 + MER76 LTR ERV 266 631 -57 6351 137 44 56 chr5 144264271 144265215 -55364935 - Tigger3b DNA MER2_type -1797 1231 277 591 203 102 0 chr5 144265215 144265333 -55364817 + FLAM_A SINE Alu 1 130 -3 6351 137 44 56 chr5 144265333 144265344 -55364806 - Tigger3b DNA MER2_type -2751 277 267 1962 109 0 78 chr5 144265344 144265665 -55364485 + AluSx SINE Alu 1 296 -16 6351 137 44 56 chr5 144265665 144265954 -55364196 - Tigger3b DNA MER2_type -2761 267 1 488 317 117 23 chr5 144266374 144266619 -55363531 + L2 LINE L2 2759 3034 -279 395 272 0 0 chr5 144266668 144266749 -55363401 + L2 LINE L2 3232 3312 -1 259 368 49 14 chr5 144267403 144267547 -55362603 - MIR SINE MIR -66 196 48 415 358 17 0 chr5 144267924 144268103 -55362047 - MIR SINE MIR 0 262 81 400 218 105 24 chr5 144269519 144269643 -55360507 + MER94 DNA DNA 1 134 0 4644 136 93 91 chr5 144269726 144270854 -55359296 + Tigger3b DNA MER2_type 1 1144 -1884 2009 151 0 0 chr5 144270854 144271159 -55358991 + AluSg SINE Alu 1 305 -5 4644 136 93 91 chr5 144271159 144271248 -55358902 + Tigger3b DNA MER2_type 1144 1231 0 2538 223 57 28 chr5 144271593 144272279 -55357871 + L1ME3A LINE L1 5455 6160 -10 913 311 25 3 chr5 144275061 144275383 -55354767 + MER69 DNA AcHobo 4 332 -2194 * 1780 239 93 25 chr5 144275378 144276430 -55353720 + MER69 DNA AcHobo 561 2526 0 22 0 0 0 chr5 144276518 144276540 -55353610 + AT_rich Low_complexity Low_complexity 1 22 0 1539 37 116 23 chr5 144276540 144276755 -55353395 - L1PA5 LINE L1 -8 6146 5912 197 176 22 22 chr5 144277554 144277645 -55352505 + (TA)n Simple_repeat Simple_repeat 2 92 0 180 0 0 0 chr5 144277669 144277689 -55352461 + (TG)n Simple_repeat Simple_repeat 2 21 0 3066 113 53 8 chr5 144278216 144278705 -55351445 - MER9 LTR ERVK 0 511 1 318 26 0 0 chr5 144278728 144278767 -55351383 + (GA)n Simple_repeat Simple_repeat 1 39 0 285 29 0 0 chr5 144278766 144278800 -55351350 + (TG)n Simple_repeat Simple_repeat 2 35 0 * 2240 110 0 3 chr5 144279291 144279601 -55350549 + AluSc SINE Alu 1 309 0 2273 95 35 27 chr5 144280116 144280484 -55349666 + L1MA1 LINE L1 5932 6302 0 2221 198 65 20 chr5 144282270 144282766 -55347384 - MLT2B1 LTR ERVL 0 520 3 1159 299 45 5 chr5 144283439 144283813 -55346337 + LTR16A LTR ERVL 1 389 -61 414 0 0 0 chr5 144283875 144283921 -55346229 + (TG)n Simple_repeat Simple_repeat 1 46 0 6081 104 33 7 chr5 144284917 144286009 -55344141 - L1PA13 LINE L1 -2 6161 5051 227 279 38 13 chr5 144286206 144286285 -55343865 - L1ME LINE L1 -553 5611 5531 264 250 19 29 chr5 144286474 144286578 -55343572 - L1ME LINE L1 -847 5299 5197 316 322 80 15 chr5 144286583 144286981 -55343169 - L1ME LINE L1 -982 5164 4741 * 2377 184 6 6 chr5 144286966 144287439 -55342711 - L1 LINE L1 -907 5239 4767 323 313 68 0 chr5 144287591 144287738 -55342412 - L1ME LINE L1 -456 5665 5509 21 71 0 0 chr5 144287766 144287808 -55342342 + AT_rich Low_complexity Low_complexity 1 42 0 2255 116 0 3 chr5 144288119 144288430 -55341720 - AluSx SINE Alu -2 310 1 24 77 0 0 chr5 144288556 144288608 -55341542 + AT_rich Low_complexity Low_complexity 1 52 0 229 57 0 0 chr5 144289104 144289139 -55341011 + L1MA3 LINE L1 6271 6305 0 691 366 148 24 chr5 144289287 144290111 -55340039 - L2 LINE L2 -407 2907 1982 2511 45 6 13 chr5 144290115 144290428 -55339722 + AluY SINE Alu 1 311 0 218 31 0 31 chr5 144290428 144290460 -55339690 + (GGAA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr5 144291049 144291070 -55339080 + AT_rich Low_complexity Low_complexity 1 21 0 301 298 76 26 chr5 144291235 144291537 -55338613 + L1MC4a LINE L1 4527 4843 -1303 898 286 82 40 chr5 144292021 144292099 -55338051 + L1MC4a LINE L1 5353 5426 -2382 437 238 29 9 chr5 144292099 144292204 -55337946 + U6 snRNA snRNA 1 107 0 898 286 82 40 chr5 144292204 144292794 -55337356 + L1MC4a LINE L1 5426 6049 -1759 572 236 21 120 chr5 144292733 144292917 -55337233 + L1MA9 LINE L1 5952 6083 -216 * 1978 123 4 0 chr5 144292917 144293227 -55336923 + AluSq SINE Alu 10 320 0 572 236 21 120 chr5 144293227 144293402 -55336748 + L1MA9 LINE L1 6083 6274 -25 201 376 44 40 chr5 144294308 144294534 -55335616 - L2 LINE L2 -493 2821 2595 304 216 7 34 chr5 144295159 144295307 -55334843 + GA-rich Low_complexity Low_complexity 4 147 0 432 0 0 0 chr5 144296557 144296605 -55333545 + (TG)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr5 144296868 144296889 -55333261 + AT_rich Low_complexity Low_complexity 1 21 0 1561 188 0 45 chr5 144296891 144297200 -55332950 + AluJo SINE Alu 1 295 -17 2277 98 0 3 chr5 144298025 144298331 -55331819 + AluSq SINE Alu 1 305 -8 2648 23 0 0 chr5 144298331 144298636 -55331514 + AluYa5 SINE Alu 1 305 -6 22 35 0 0 chr5 144299635 144299664 -55330486 + AT_rich Low_complexity Low_complexity 1 29 0 1296 94 6 0 chr5 144300070 144300251 -55329899 - L1PA14 LINE L1 -7 6154 5973 2795 83 37 0 chr5 144300251 144300626 -55329524 + L1PA14 LINE L1 5564 5952 -209 363 241 75 63 chr5 144301214 144301388 -55328762 + MER69A DNA AcHobo 2 177 0 22 0 0 0 chr5 144302592 144302614 -55327536 + AT_rich Low_complexity Low_complexity 1 22 0 1922 181 44 64 chr5 144302991 144303443 -55326707 - MSTB2 LTR MaLR 0 457 15 22 0 0 54 chr5 144304079 144304098 -55326052 + AT_rich Low_complexity Low_complexity 1 19 -16 2927 155 20 11 chr5 144304098 144304641 -55325509 - L1MA6 LINE L1 0 6300 5753 22 0 0 54 chr5 144304641 144304658 -55325492 + AT_rich Low_complexity Low_complexity 19 35 0 283 233 48 58 chr5 144305171 144305274 -55324876 - MIR SINE MIR -96 166 65 2143 105 13 3 chr5 144305281 144305587 -55324563 - AluSx SINE Alu -3 309 1 483 242 172 54 chr5 144306164 144306350 -55323800 - MIR SINE MIR -45 217 10 696 271 60 15 chr5 144306656 144306855 -55323295 + MIR SINE MIR 2 209 -53 621 281 86 40 chr5 144307087 144307365 -55322785 + MLT1H LTR MaLR 1 291 -258 23 54 0 0 chr5 144308362 144308399 -55321751 + AT_rich Low_complexity Low_complexity 1 37 0 354 179 154 0 chr5 144309430 144309508 -55320642 - L2 LINE L2 -1 3312 3223 4206 139 26 90 chr5 144310262 144311155 -55318995 + L1MA9 LINE L1 5320 6155 -157 187 103 51 0 chr5 144311164 144311203 -55318947 + GA-rich Low_complexity Low_complexity 4 44 0 744 93 86 36 chr5 144311221 144311361 -55318789 + L1MA9 LINE L1 6165 6311 -1 26 88 0 0 chr5 144311701 144311769 -55318381 + AT_rich Low_complexity Low_complexity 1 68 0 581 283 81 35 chr5 144312037 144312476 -55317674 - L1MC/D LINE L1 -506 5658 5280 26 50 0 0 chr5 144312481 144312521 -55317629 + AT_rich Low_complexity Low_complexity 1 40 0 723 311 105 61 chr5 144313158 144313480 -55316670 - HAL1 LINE L1 -769 1738 1431 2109 116 57 25 chr5 144313480 144313833 -55316317 + THE1B LTR MaLR 1 364 0 723 311 105 61 chr5 144313833 144314389 -55315761 - HAL1 LINE L1 -1076 1431 822 22 0 0 0 chr5 144315636 144315658 -55314492 + AT_rich Low_complexity Low_complexity 1 22 0 19325 26 1 0 chr5 144316548 144319622 -55310528 + L1PA3 LINE L1 3076 6150 -5 461 311 23 19 chr5 144319668 144319932 -55310218 + L1MEc LINE L1 1552 1816 -4580 936 229 55 22 chr5 144320432 144320848 -55309302 - MLT1F LTR MaLR -7 535 59 680 251 35 0 chr5 144320928 144321099 -55309051 + Charlie1 DNA MER1_type 51 227 -2534 558 231 0 0 chr5 144321093 144321214 -55308936 + Charlie1 DNA MER1_type 2620 2740 -21 * 22 0 0 0 chr5 144321298 144321320 -55308830 + AT_rich Low_complexity Low_complexity 1 22 0 992 146 16 26 chr5 144321367 144321498 -55308652 + L1PB4 LINE L1 5888 6018 -138 1781 114 59 31 chr5 144321498 144321788 -55308362 - AluSx SINE Alu -14 298 1 992 146 16 26 chr5 144321788 144321848 -55308302 + L1PB4 LINE L1 6018 6077 -79 433 258 32 0 chr5 144321890 144322014 -55308136 + L1ME3A LINE L1 5851 5978 -192 259 294 29 0 chr5 144322200 144322268 -55307882 - MIR SINE MIR -65 143 74 180 77 0 0 chr5 144322534 144322560 -55307590 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 303 299 24 39 chr5 144322584 144322711 -55307439 - L2 LINE L2 -72 3241 3117 844 257 17 0 chr5 144324550 144324729 -55305421 + MER5A DNA MER1_type 7 188 -1 7131 41 9 15 chr5 144325729 144326637 -55303513 - L1PA4 LINE L1 0 6155 5254 3606 21 0 0 chr5 144326651 144327077 -55303073 + L1PA4 LINE L1 4808 5233 -913 210 269 51 26 chr5 144328289 144328367 -55301783 - MIR SINE MIR -10 252 173 2435 192 60 45 chr5 144328791 144329411 -55300739 - L1MC2 LINE L1 -2 6342 5714 758 275 8 0 chr5 144329421 144329665 -55300485 - L1M4 LINE L1 -1538 4608 4363 455 240 29 29 chr5 144329678 144329782 -55300368 + FLAM_A SINE Alu 1 104 -38 2045 113 3 26 chr5 144329802 144330141 -55300009 + AluSc SINE Alu 1 309 0 781 263 86 10 chr5 144330141 144330434 -55299716 - L1M4 LINE L1 -1783 4363 4045 326 188 16 0 chr5 144330443 144330507 -55299643 - L1MCa LINE L1 -4822 1604 1540 2639 231 43 21 chr5 144330905 144331532 -55298618 + MER82 DNA MER2_type 13 653 0 32 75 0 0 chr5 144331649 144331716 -55298434 + AT_rich Low_complexity Low_complexity 1 67 0 8603 105 25 8 chr5 144382167 144382423 -55247727 - L1P LINE L1 -2376 3770 3520 213 39 0 0 chr5 144382423 144382449 -55247701 + (TTG)n Simple_repeat Simple_repeat 2 27 0 8603 105 25 8 chr5 144382449 144383510 -55246640 - L1P LINE L1 -2626 3520 2430 5239 73 3 4 chr5 144383510 144384187 -55245963 + L1PA7 LINE L1 5459 6151 -3 359 179 0 13 chr5 144384446 144384524 -55245626 + CT-rich Low_complexity Low_complexity 3 79 0 9346 183 48 44 chr5 144386784 144387523 -55242627 + Ricksha_c DNA DNA 8 743 -2511 551 39 26 0 chr5 144387523 144387600 -55242550 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 9346 183 48 44 chr5 144387600 144388349 -55241801 + Ricksha_c DNA DNA 743 1509 -1745 2098 128 0 3 chr5 144388349 144388655 -55241495 + AluSx SINE Alu 1 305 -7 9346 183 48 44 chr5 144388655 144389196 -55240954 + Ricksha_c DNA DNA 1509 2046 0 297 237 0 0 chr5 144389201 144389260 -55240890 - MER8 DNA MER2_type 0 239 181 639 275 60 0 chr5 144389305 144389472 -55240678 - MER8 DNA MER2_type -62 177 1 329 291 118 0 chr5 144389516 144389643 -55240507 + MIR SINE MIR 48 189 -73 514 341 108 19 chr5 144389652 144390080 -55240070 + L2 LINE L2 2453 2918 -396 607 279 44 44 chr5 144390461 144390712 -55239438 + MLT1K LTR MaLR 323 573 -15 24 0 0 0 chr5 144391607 144391631 -55238519 + AT_rich Low_complexity Low_complexity 1 24 0 748 308 88 42 chr5 144391770 144392124 -55238026 - LTR16C LTR ERVL -100 391 22 3849 214 71 19 chr5 144393214 144393400 -55236750 - L1MC3 LINE L1 -926 6859 6684 507 33 0 0 chr5 144393400 144393461 -55236689 + (TG)n Simple_repeat Simple_repeat 2 62 0 3849 214 71 19 chr5 144393461 144394212 -55235938 - L1MC3 LINE L1 -1101 6684 5873 369 0 0 0 chr5 144394432 144394473 -55235677 + (CA)n Simple_repeat Simple_repeat 2 42 0 23 0 0 0 chr5 144394976 144394999 -55235151 + AT_rich Low_complexity Low_complexity 1 23 0 2821 247 60 18 chr5 144395929 144396642 -55233508 + L1M4b LINE L1 13 755 -6104 24 32 0 0 chr5 144396665 144396696 -55233454 + AT_rich Low_complexity Low_complexity 1 31 0 493 311 101 17 chr5 144396957 144397253 -55232897 - MLT1J2 LTR MaLR -68 382 62 304 253 42 63 chr5 144399434 144399529 -55230621 + HAL1 LINE L1 1146 1238 -1269 249 329 84 38 chr5 144399883 144400513 -55229637 + L1 LINE L1 2339 2997 -3149 396 342 69 46 chr5 144400541 144400930 -55229220 + L1 LINE L1 3070 3467 -2679 22 56 0 0 chr5 144403266 144403302 -55226848 + AT_rich Low_complexity Low_complexity 1 36 0 358 330 62 22 chr5 144404641 144404820 -55225330 + MIR SINE MIR 47 232 -30 21 36 0 0 chr5 144405087 144405115 -55225035 + AT_rich Low_complexity Low_complexity 1 28 0 317 377 33 16 chr5 144406643 144406826 -55223324 + L2 LINE L2 2560 2745 -569 489 288 138 33 chr5 144407311 144408151 -55221999 - L1MEc LINE L1 -2660 3904 2977 34 0 0 0 chr5 144408684 144408718 -55221432 + AT_rich Low_complexity Low_complexity 1 34 0 336 323 123 25 chr5 144408857 144409142 -55221008 - L1MEc LINE L1 -4513 2232 1920 723 142 50 0 chr5 144409163 144409304 -55220846 + L1MA8 LINE L1 6139 6286 -5 390 283 76 24 chr5 144409343 144409633 -55220517 - L1MEc LINE L1 -4845 1900 1596 408 281 186 29 chr5 144409692 144410101 -55220049 - L1MEc LINE L1 -5221 1333 861 2166 102 0 0 chr5 144410143 144410437 -55219713 + AluY SINE Alu 1 294 -17 2045 154 51 63 chr5 144411260 144411689 -55218461 - MSTA LTR MaLR 0 428 5 277 230 40 56 chr5 144411714 144411840 -55218310 - MLT2E LTR ERVL 0 628 505 334 342 109 22 chr5 144412434 144412756 -55217394 + LTR16A LTR ERVL 95 444 -6 236 163 0 20 chr5 144413128 144413177 -55216973 - L1MC4 LINE L1 -1339 6703 6656 21 0 0 0 chr5 144413677 144413698 -55216452 + AT_rich Low_complexity Low_complexity 1 21 0 1527 186 0 32 chr5 144413751 144414063 -55216087 + AluJb SINE Alu 9 310 -2 414 292 66 78 chr5 144414284 144414541 -55215609 + MLT1J LTR MaLR 247 500 -11 268 245 10 10 chr5 144414665 144414767 -55215383 + GA-rich Low_complexity Low_complexity 4 105 0 243 364 77 18 chr5 144415971 144416191 -55213959 + L1MEd LINE L1 847 1079 -5555 272 324 153 0 chr5 144416401 144416512 -55213638 + MIR SINE MIR 13 140 -122 21 89 0 0 chr5 144416592 144416648 -55213502 + AT_rich Low_complexity Low_complexity 1 56 0 1641 246 59 23 chr5 144416724 144417422 -55212728 - L1M4 LINE L1 -2431 3715 2993 388 273 116 32 chr5 144417421 144417637 -55212513 - L1MCb LINE L1 -5326 1228 995 * 311 231 107 74 chr5 144417877 144417998 -55212152 - L1MCb LINE L1 -5555 490 402 590 281 39 0 chr5 144418811 144418989 -55211161 - MER5A DNA MER1_type -3 186 2 226 198 0 62 chr5 144419186 144419267 -55210883 + L1MEd LINE L1 1540 1615 -4927 2256 92 3 0 chr5 144419352 144419644 -55210506 - AluSp SINE Alu -19 294 2 22 0 0 0 chr5 144419748 144419770 -55210380 + AT_rich Low_complexity Low_complexity 1 22 0 1381 206 114 49 chr5 144419805 144420373 -55209777 + L1MEd LINE L1 1582 2186 -4458 * 9465 196 30 7 chr5 144420364 144425597 -55204553 + L1PA13 LINE L1 1253 6805 -9 1088 254 14 25 chr5 144425598 144426043 -55204107 + L1MEd LINE L1 3535 3974 -2670 230 240 21 21 chr5 144426055 144426151 -55203999 + (TA)n Simple_repeat Simple_repeat 1 96 0 1910 280 62 15 chr5 144426167 144426903 -55203247 + L1MEd LINE L1 3987 4757 -1887 18310 183 41 27 chr5 144426914 144429909 -55200241 + L1M1 LINE L1 22 2974 -4591 1564 185 8 0 chr5 144429909 144430169 -55199981 - AluJb SINE Alu -47 265 4 18310 183 41 27 chr5 144430169 144431101 -55199049 + L1M1 LINE L1 2974 3892 -3673 2445 125 22 3 chr5 144431101 144431469 -55198681 + THE1C LTR MaLR 1 375 0 18310 183 41 27 chr5 144431469 144431563 -55198587 + L1M1 LINE L1 3892 3983 -3582 2039 108 4 0 chr5 144431563 144431841 -55198309 + AluY SINE Alu 21 299 -12 18310 183 41 27 chr5 144431841 144432835 -55197315 + L1M1 LINE L1 3983 5113 -2452 477 0 0 0 chr5 144432835 144432888 -55197262 + (CA)n Simple_repeat Simple_repeat 2 54 0 18310 183 41 27 chr5 144432888 144432987 -55197163 + L1M1 LINE L1 5113 5209 -2356 1277 145 18 0 chr5 144432983 144433211 -55196939 - L1PA13 LINE L1 -4577 2210 1979 * 525 201 13 28 chr5 144433205 144433423 -55196727 + L1MC3 LINE L1 5777 5885 -459 * 1269 146 5 0 chr5 144433426 144433618 -55196532 - THE1C LTR MaLR -2 373 181 480 214 58 35 chr5 144433618 144433791 -55196359 + L1MC3 LINE L1 7501 7677 -108 22 70 0 0 chr5 144434413 144434456 -55195694 + AT_rich Low_complexity Low_complexity 1 43 0 194 133 0 0 chr5 144434599 144434629 -55195521 + L2 LINE L2 3267 3296 -17 292 281 0 0 chr5 144434695 144434759 -55195391 - L2 LINE L2 -21 3292 3229 1434 222 29 2 chr5 144435133 144435525 -55194625 - L1P LINE L1 -791 5355 4970 3664 157 65 27 chr5 144435525 144436266 -55193884 + L1PB4 LINE L1 5375 6143 -13 372 155 0 0 chr5 144436266 144436337 -55193813 + GA-rich Low_complexity Low_complexity 1 71 0 714 274 23 23 chr5 144437264 144437439 -55192711 - MER45A DNA AcHobo 0 178 4 412 297 47 78 chr5 144437674 144437930 -55192220 + MIR SINE MIR 13 260 -2 395 383 29 29 chr5 144438622 144438865 -55191285 + L2 LINE L2 231 473 -2841 344 180 2 0 chr5 144438938 144439010 -55191140 - L1PBa LINE L1 -3982 2881 2809 * 887 126 0 7 chr5 144439008 144439151 -55190999 + L1PBb LINE L1 790 931 -5273 24 0 0 0 chr5 144439244 144439268 -55190882 + AT_rich Low_complexity Low_complexity 1 24 0 2076 194 19 26 chr5 144439706 144440129 -55190021 - MSTB1 LTR MaLR -12 420 1 210 143 0 0 chr5 144440129 144440164 -55189986 + (ATG)n Simple_repeat Simple_repeat 2 36 0 2120 171 24 39 chr5 144440454 144441024 -55189126 + MLT2A2 LTR ERVL 1 554 0 38157 106 22 10 chr5 144441024 144441437 -55188713 + HERVL-A2 LTR ERVL 1 407 -5247 1469 111 0 0 chr5 144441437 144441627 -55188523 - AluSx SINE Alu -62 250 61 38157 106 22 10 chr5 144441627 144443458 -55186692 + HERVL-A2 LTR ERVL 407 2213 -3441 378 0 0 0 chr5 144443458 144443500 -55186650 + (TG)n Simple_repeat Simple_repeat 2 43 0 38157 106 22 10 chr5 144443500 144446186 -55183964 + HERVL-A2 LTR ERVL 2213 5009 -645 2136 103 7 3 chr5 144446186 144446476 -55183674 + AluSc SINE Alu 1 291 -18 38157 106 22 10 chr5 144446476 144446955 -55183195 + HERVL-A2 LTR ERVL 5009 5480 -174 1912 185 29 29 chr5 144446974 144447509 -55182641 + MLT2A2 LTR ERVL 20 554 0 1441 177 25 57 chr5 144447595 144447912 -55182238 - AluJo SINE Alu -5 307 1 1328 232 24 68 chr5 144448129 144448512 -55181638 - MLT1A2 LTR MaLR -8 366 1 189 0 0 0 chr5 144449487 144449508 -55180642 + (A)n Simple_repeat Simple_repeat 1 21 0 633 319 72 14 chr5 144449908 144450256 -55179894 + L1MDa LINE L1 50 417 -6123 445 213 71 71 chr5 144450525 144450694 -55179456 + L1MDa LINE L1 1001 1169 -5374 * 2191 170 62 27 chr5 144450689 144451172 -55178978 + L1MD1 LINE L1 5743 6242 0 563 294 34 0 chr5 144451224 144451370 -55178780 - MER45A DNA AcHobo 0 178 28 647 193 140 0 chr5 144451565 144451736 -55178414 - MER96B DNA MER1_type? -219 198 4 * 1049 276 76 33 chr5 144451736 144451928 -55178222 + LTR33 LTR ERVL 67 249 -272 2324 94 48 14 chr5 144451928 144452280 -55177870 + THE1B LTR MaLR 1 364 0 1049 276 76 33 chr5 144452280 144452520 -55177630 + LTR33 LTR ERVL 249 518 -3 200 227 23 0 chr5 144453417 144453461 -55176689 + (CA)n Simple_repeat Simple_repeat 2 46 0 384 293 127 59 chr5 144453914 144454393 -55175757 - L2 LINE L2 0 3313 2763 418 339 84 25 chr5 144454576 144454815 -55175335 + MIR SINE MIR 10 262 0 487 298 72 45 chr5 144454889 144455154 -55174996 - LTR16A1 LTR ERVL 0 457 186 1384 203 35 0 chr5 144455202 144455492 -55174658 + MER82 DNA MER2_type 2 301 -352 416 213 0 0 chr5 144455491 144455571 -55174579 + MER82 DNA MER2_type 573 652 -1 * 2112 134 3 0 chr5 144455938 144456237 -55173913 - AluSx SINE Alu -12 300 1 670 219 80 0 chr5 144457048 144457199 -55172951 - MER5B DNA MER1_type -15 163 1 340 282 0 0 chr5 144457320 144457398 -55172752 - MLT1J LTR MaLR -92 419 342 252 266 144 29 chr5 144457560 144457733 -55172417 - MLT1J LTR MaLR -291 162 1 3454 104 0 61 chr5 144461234 144461375 -55168775 - L1P LINE L1 -3480 2666 2518 6701 48 1 1 chr5 144461375 144462160 -55167990 + LTR5 LTR ERVK 1 785 -184 3454 104 0 61 chr5 144462160 144462595 -55167555 - L1P LINE L1 -3628 2518 2125 190 279 49 0 chr5 144463019 144463080 -55167070 - MIR SINE MIR -85 177 114 376 302 94 52 chr5 144463081 144463273 -55166877 + MIR SINE MIR 48 247 -15 27 29 0 0 chr5 144463777 144463811 -55166339 + AT_rich Low_complexity Low_complexity 1 34 0 1191 211 36 20 chr5 144464509 144464760 -55165390 - MLT1C LTR MaLR -5 462 208 1078 143 11 0 chr5 144464764 144464939 -55165211 - MLT1-int LTR MaLR -1194 177 1 1869 180 17 44 chr5 144464940 144465345 -55164805 - MLT2C1 LTR ERVL -1 396 3 585 297 5 2 chr5 144465535 144465737 -55164413 - MIR SINE MIR 0 262 15 436 250 151 28 chr5 144466313 144466525 -55163625 - L2 LINE L2 -1 3312 3075 300 243 14 0 chr5 144466866 144466936 -55163214 - MER63 DNA MER1_type -13 1047 977 402 189 232 0 chr5 144466943 144467038 -55163112 - MER63 DNA MER1_type -91 745 3 13020 164 17 46 chr5 144470028 144472647 -55157503 - L1MA1 LINE L1 -2 7719 5026 1634 93 0 0 chr5 144472647 144472870 -55157280 + L1PA5 LINE L1 5930 6154 0 13020 164 17 46 chr5 144472870 144474848 -55155302 - L1MA1 LINE L1 -2695 5026 3262 43306 42 5 1 chr5 144474854 144480981 -55149169 + L1PA3 LINE L1 4 6153 -2 803 194 60 0 chr5 144480966 144481167 -55148983 - L1MA1 LINE L1 -4266 3299 3087 * 15691 160 50 13 chr5 144481213 144484026 -55146124 - L1MA1 LINE L1 -4406 3159 243 21 0 0 0 chr5 144484052 144484073 -55146077 + AT_rich Low_complexity Low_complexity 1 21 0 517 349 77 27 chr5 144484151 144484590 -55145560 + L2 LINE L2 2103 2664 -650 4842 217 43 28 chr5 144484609 144486069 -55144081 + L1M4 LINE L1 3623 5104 -1042 1685 205 184 31 chr5 144486067 144486638 -55143512 + L1MC3 LINE L1 7128 7785 0 * 252 0 0 0 chr5 144486827 144486855 -55143295 + (TG)n Simple_repeat Simple_repeat 2 29 0 5884 205 36 11 chr5 144486978 144489388 -55140762 + L1MC1 LINE L1 3666 6134 -199 225 234 66 6 chr5 144489419 144489586 -55140564 + (TA)n Simple_repeat Simple_repeat 2 178 0 421 354 49 33 chr5 144489827 144490174 -55139976 - L2 LINE L2 -280 3033 2684 359 273 93 25 chr5 144491153 144491314 -55138836 - MIR3 SINE MIR -23 185 14 247 227 15 0 chr5 144494301 144494367 -55135783 + (TA)n Simple_repeat Simple_repeat 2 68 0 201 171 0 0 chr5 144495382 144495417 -55134733 + (TTAA)n Simple_repeat Simple_repeat 1 35 0 1260 178 140 4 chr5 144495880 144496021 -55134129 - AluJo SINE Alu -2 300 180 477 0 0 0 chr5 144496021 144496074 -55134076 + (TTA)n Simple_repeat Simple_repeat 2 54 0 1260 178 140 4 chr5 144496074 144496196 -55133954 - AluJo SINE Alu -122 180 1 22 0 0 0 chr5 144497936 144497958 -55132192 + AT_rich Low_complexity Low_complexity 1 22 0 236 287 103 11 chr5 144498673 144498760 -55131390 - L2 LINE L2 -18 3254 3160 663 257 22 11 chr5 144499272 144499455 -55130695 + MLT1J2 LTR MaLR 21 205 -245 336 145 0 32 chr5 144500240 144500302 -55129848 - L1M3 LINE L1 -737 5597 5538 * 1561 195 10 0 chr5 144500301 144500604 -55129546 - L1M3 LINE L1 -1053 5093 4788 * 3146 173 14 7 chr5 144500601 144501172 -55128978 + L1MB1 LINE L1 5611 6185 -4 418 151 11 86 chr5 144501229 144501322 -55128828 + L1MA10 LINE L1 6203 6288 -46 411 213 111 0 chr5 144501326 144501434 -55128716 + L1MA8 LINE L1 6166 6285 -6 2367 86 0 7 chr5 144501436 144501737 -55128413 - AluSg SINE Alu -11 299 1 256 135 0 39 chr5 144501766 144501818 -55128332 + L1MA10 LINE L1 6283 6332 -2 236 377 27 27 chr5 144503037 144503183 -55126967 - MIR SINE MIR -102 160 15 3709 189 37 3 chr5 144503817 144504525 -55125625 - MER44D DNA MER2_type 0 605 2 307 290 0 0 chr5 144504605 144504674 -55125476 + L2 LINE L2 3245 3313 0 1707 110 4 0 chr5 144507118 144507363 -55122787 - L1PA13 LINE L1 -14 6149 5904 26 0 0 0 chr5 144507366 144507392 -55122758 + AT_rich Low_complexity Low_complexity 1 26 0 22 70 0 0 chr5 144507432 144507475 -55122675 + AT_rich Low_complexity Low_complexity 1 43 0 621 164 36 7 chr5 144507670 144507808 -55122342 - MER69A DNA AcHobo -35 142 1 227 54 27 0 chr5 144508249 144508286 -55121864 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 10397 54 44 26 chr5 144508294 144509654 -55120496 - SVA Other Other -1 1385 1 210 105 0 0 chr5 144509654 144509692 -55120458 + (GGGAGA)n Simple_repeat Simple_repeat 2 39 0 1015 406 0 32 chr5 144509696 144509974 -55120176 - L1PA13 LINE L1 -1 6162 5894 244 255 236 28 chr5 144510275 144510381 -55119769 + MIR3 SINE MIR 36 163 -45 1623 180 156 8 chr5 144510413 144510786 -55119364 + MSTA LTR MaLR 1 428 0 8364 150 14 62 chr5 144510788 144512445 -55117705 + MSTA-int LTR MaLR 3 1580 0 625 170 9 0 chr5 144512445 144512557 -55117593 + MSTA LTR MaLR 1 113 -315 234 287 58 11 chr5 144512874 144512961 -55117189 - LTR33 LTR ERVL -2 519 429 327 315 37 0 chr5 144513201 144513309 -55116841 - LTR33 LTR ERVL -406 115 4 22 0 0 0 chr5 144513339 144513361 -55116789 + AT_rich Low_complexity Low_complexity 1 22 0 809 254 182 0 chr5 144513587 144513933 -55116217 - L1ME1 LINE L1 -5 6161 5753 24 32 0 0 chr5 144514045 144514076 -55116074 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr5 144514112 144514147 -55116003 + AT_rich Low_complexity Low_complexity 1 35 0 34 0 0 0 chr5 144514278 144514312 -55115838 + AT_rich Low_complexity Low_complexity 1 34 0 287 316 272 22 chr5 144516130 144516402 -55113748 - L2 LINE L2 -36 3277 2938 186 43 0 0 chr5 144517945 144517968 -55112182 + (A)n Simple_repeat Simple_repeat 1 23 0 1379 211 0 24 chr5 144518266 144518560 -55111590 + AluJb SINE Alu 3 289 -23 1092 266 92 49 chr5 144518684 144519237 -55110913 - L1MC4 LINE L1 0 8042 7466 271 271 0 0 chr5 144520220 144520279 -55109871 + L3b LINE CR1 1520 1578 -5 724 300 65 60 chr5 144520748 144521165 -55108985 - LTR16C LTR ERVL 0 491 73 2111 78 0 10 chr5 144521242 144521538 -55108612 + L1PA7 LINE L1 5862 6154 0 477 196 54 0 chr5 144522118 144522230 -55107920 - L1ME1 LINE L1 -15 6151 6034 328 287 19 6 chr5 144522971 144522986 -55107164 + (TA)n Simple_repeat Simple_repeat 2 15 -145 207 0 0 0 chr5 144522986 144523009 -55107141 + (CA)n Simple_repeat Simple_repeat 2 24 0 328 287 19 6 chr5 144523009 144523150 -55107000 + (TA)n Simple_repeat Simple_repeat 15 160 0 24 0 0 0 chr5 144523612 144523636 -55106514 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr5 144523738 144523763 -55106387 + AT_rich Low_complexity Low_complexity 1 25 0 41991 40 5 3 chr5 144524032 144530116 -55100034 + L1PA4 LINE L1 2 6097 -58 186 43 0 0 chr5 144530116 144530139 -55100011 + (TA)n Simple_repeat Simple_repeat 1 23 0 41991 40 5 3 chr5 144530139 144530199 -55099951 + L1PA4 LINE L1 6097 6155 0 311 252 180 14 chr5 144530221 144530360 -55099790 + MIR SINE MIR 94 255 -7 370 236 187 60 chr5 144531241 144531508 -55098642 + L1MC5 LINE L1 7625 7925 -36 587 294 114 9 chr5 144531613 144531824 -55098326 + MIR SINE MIR 30 262 0 194 374 50 0 chr5 144532608 144532747 -55097403 + L2 LINE L2 2598 2743 -571 2026 132 17 0 chr5 144533103 144533392 -55096758 - AluSx SINE Alu -18 294 1 218 296 0 0 chr5 144533429 144533483 -55096667 + L2 LINE L2 3219 3272 0 265 321 119 0 chr5 144535664 144535773 -55094377 + L2 LINE L2 3140 3261 -11 395 229 57 117 chr5 144536253 144536637 -55093513 - L1ME2 LINE L1 -1 6163 5803 1488 248 61 46 chr5 144536648 144536934 -55093216 - L1MEc LINE L1 -3639 2576 2296 10631 47 5 0 chr5 144536934 144539018 -55091132 - L1PA5 LINE L1 -6 6148 4058 1488 248 61 46 chr5 144539018 144539412 -55090738 - L1MEc LINE L1 -3919 2296 1914 215 293 57 47 chr5 144539827 144539933 -55090217 - MIR SINE MIR -57 205 99 1838 168 128 13 chr5 144540542 144540924 -55089226 - MSTA LTR MaLR 0 428 3 7998 205 25 6 chr5 144540926 144542547 -55087603 - MSTA-int LTR MaLR 0 1651 1 1669 161 140 48 chr5 144542547 144542765 -55087385 - MSTA LTR MaLR 0 428 231 2244 116 0 0 chr5 144542765 144543066 -55087084 - AluSg SINE Alu -9 301 1 1669 161 140 48 chr5 144543066 144543239 -55086911 - MSTA LTR MaLR -197 231 1 21 0 0 0 chr5 144543560 144543581 -55086569 + AT_rich Low_complexity Low_complexity 1 21 0 1943 118 11 0 chr5 144544100 144544387 -55085763 + AluSq SINE Alu 3 292 -21 21 71 0 0 chr5 144545576 144545618 -55084532 + AT_rich Low_complexity Low_complexity 1 42 0 1982 121 4 4 chr5 144545757 144546079 -55084071 + AluSg SINE Alu 1 322 0 192 200 0 0 chr5 144546192 144546237 -55083913 + (TGGA)n Simple_repeat Simple_repeat 4 48 0 2132 116 3 7 chr5 144546265 144546567 -55083583 - AluSx SINE Alu -11 301 1 2292 164 25 30 chr5 144546642 144547075 -55083075 + Tigger2a DNA MER2_type 1 431 -3 2485 132 42 7 chr5 144547090 144547440 -55082710 - L1PB1 LINE L1 -3 6148 5779 351 0 0 0 chr5 144547440 144547479 -55082671 + (TG)n Simple_repeat Simple_repeat 2 40 0 2485 132 42 7 chr5 144547479 144547559 -55082591 - L1PB1 LINE L1 -372 5779 5703 341 257 37 9 chr5 144547724 144547833 -55082317 - MIR3 SINE MIR 0 208 97 389 316 18 0 chr5 144548454 144548568 -55081582 + MLT1H1 LTR MaLR 431 546 -9 245 349 0 0 chr5 144548890 144548956 -55081194 - MIR SINE MIR -61 147 82 1462 194 61 0 chr5 144549392 144549865 -55080285 + AluJb SINE Alu 1 491 0 529 166 11 44 chr5 144549895 144550076 -55080074 + GA-rich Low_complexity Low_complexity 2 176 0 605 345 78 35 chr5 144550555 144551393 -55078757 + L1MEc LINE L1 37 910 -5486 627 306 18 31 chr5 144551654 144551883 -55078267 - MIR SINE MIR -14 248 23 183 344 67 11 chr5 144552152 144552242 -55077908 + L3b LINE CR1 1347 1441 -142 13305 179 42 14 chr5 144553306 144555648 -55074502 + L1MA5 LINE L1 2264 4758 -1542 261 0 0 0 chr5 144555648 144555677 -55074473 + (CAA)n Simple_repeat Simple_repeat 2 30 0 13305 179 42 14 chr5 144555677 144556957 -55073193 + L1MA5 LINE L1 4758 6001 -299 339 276 32 0 chr5 144557003 144557126 -55073024 + GA-rich Low_complexity Low_complexity 2 128 0 452 346 105 20 chr5 144557782 144558077 -55072073 - MLT1K LTR MaLR -251 337 18 247 272 78 0 chr5 144558090 144558193 -55071957 - MLT1L LTR MaLR -9 606 496 21 36 0 0 chr5 144559191 144559219 -55070931 + AT_rich Low_complexity Low_complexity 1 28 0 24 77 0 0 chr5 144559273 144559325 -55070825 + AT_rich Low_complexity Low_complexity 1 52 0 21 36 0 0 chr5 144560756 144560784 -55069366 + AT_rich Low_complexity Low_complexity 1 28 0 414 231 67 30 chr5 144561866 144562000 -55068150 - MER5A DNA MER1_type -3 186 48 24 0 0 0 chr5 144562317 144562341 -55067809 + AT_rich Low_complexity Low_complexity 1 24 0 730 230 21 16 chr5 144562599 144562786 -55067364 + MIR SINE MIR 4 191 -71 2205 109 0 3 chr5 144563230 144563542 -55066608 + AluSx SINE Alu 1 311 -1 2062 180 83 11 chr5 144563564 144563997 -55066153 - MER88 LTR ERVL 0 464 1 205 309 21 32 chr5 144564280 144564374 -55065776 - MER5A DNA MER1_type -34 155 63 251 262 290 9 chr5 144564604 144564711 -55065439 + MIR SINE MIR 111 247 -15 476 170 9 0 chr5 144566098 144566204 -55063946 + GA-rich Low_complexity Low_complexity 1 107 0 400 247 57 44 chr5 144566495 144566596 -55063554 - MIR SINE MIR -10 252 147 1920 110 92 0 chr5 144566596 144566877 -55063273 - AluSc SINE Alu -2 307 1 400 247 57 44 chr5 144566877 144566933 -55063217 - MIR SINE MIR -115 147 93 234 270 32 0 chr5 144566957 144567020 -55063130 + LTR50 LTR ERVL 14 78 -717 2241 125 0 0 chr5 144569145 144569450 -55060700 - AluSx SINE Alu -7 305 1 34 65 0 0 chr5 144569936 144569998 -55060152 + AT_rich Low_complexity Low_complexity 1 62 0 648 99 0 0 chr5 144571116 144571207 -55058943 + AluY SINE Alu 205 295 -16 467 270 41 51 chr5 144571424 144571620 -55058530 + MIR SINE MIR 23 216 -46 1579 254 75 27 chr5 144572220 144572767 -55057383 - MLT2B1 LTR ERVL -4 550 1 22 35 0 0 chr5 144572837 144572866 -55057284 + AT_rich Low_complexity Low_complexity 1 29 0 598 217 72 14 chr5 144573299 144573437 -55056713 + AluJo SINE Alu 38 183 -129 682 291 64 43 chr5 144574830 144575156 -55054994 + L1MC4a LINE L1 5514 5846 -1962 208 280 140 28 chr5 144575668 144575775 -55054375 + MIR3 SINE MIR 85 203 -5 1093 139 39 2 chr5 144576045 144576249 -55053901 + L1MB3 LINE L1 5676 5885 -298 4448 172 15 13 chr5 144576680 144577471 -55052679 - MER54B LTR ERVL 0 793 1 288 309 77 43 chr5 144577473 144577706 -55052444 + L1M4 LINE L1 3371 3611 -2535 22 0 0 0 chr5 144578650 144578672 -55051478 + AT_rich Low_complexity Low_complexity 1 22 0 282 410 53 0 chr5 144578764 144578952 -55051198 - L2 LINE L2 -213 3059 2862 1289 251 57 36 chr5 144578980 144579422 -55050728 + MLT1C LTR MaLR 7 457 -10 305 253 13 0 chr5 144579481 144579556 -55050594 + MLT1E2 LTR MaLR 1 76 -466 379 296 0 0 chr5 144579601 144579689 -55050461 + L2 LINE L2 3224 3311 -2 1966 151 6 6 chr5 144580350 144580662 -55049488 + AluSx SINE Alu 1 312 0 322 266 9 18 chr5 144580824 144580937 -55049213 + MIR SINE MIR 105 216 -46 704 268 121 80 chr5 144581246 144581900 -55048250 + L2 LINE L2 1337 2017 -1297 186 336 106 10 chr5 144581983 144582087 -55048063 - MIR SINE MIR -97 165 52 189 121 0 0 chr5 144582246 144582279 -55047871 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 2255 122 30 14 chr5 144582304 144582673 -55047477 - THE1C LTR MaLR 0 375 1 21 36 0 0 chr5 144583576 144583604 -55046546 + AT_rich Low_complexity Low_complexity 1 28 0 1793 14 14 0 chr5 144583934 144584142 -55046008 - SVA Other Other 0 1386 1176 1422 188 99 3 chr5 144584450 144584764 -55045386 - MER2 DNA MER2_type 0 344 1 1893 141 7 13 chr5 144585589 144585888 -55044262 - AluSx SINE Alu -15 297 1 26 74 0 0 chr5 144586972 144587026 -55043124 + AT_rich Low_complexity Low_complexity 1 54 0 804 146 0 0 chr5 144589457 144589580 -55040570 + FLAM_A SINE Alu 16 138 -4 399 21 0 0 chr5 144589636 144589684 -55040466 + (CA)n Simple_repeat Simple_repeat 2 49 0 711 139 115 8 chr5 144590020 144590142 -55040008 - AluSq/x SINE Alu -178 135 1 331 364 87 11 chr5 144590794 144590978 -55039172 + MIR SINE MIR 9 206 -56 1792 84 133 8 chr5 144592187 144592450 -55037700 + AluSc SINE Alu 1 296 -13 1745 230 113 0 chr5 144592614 144593048 -55037102 + MLT1E2 LTR MaLR 142 624 -2 580 316 58 4 chr5 144593757 144593982 -55036168 - L2 LINE L2 -583 2731 2495 1798 132 20 33 chr5 144594810 144595113 -55035037 - AluSx SINE Alu -13 299 1 1495 188 7 24 chr5 144595144 144595431 -55034719 - AluJo SINE Alu -30 282 1 318 67 0 0 chr5 144595916 144595961 -55034189 + (CA)n Simple_repeat Simple_repeat 1 45 0 433 254 99 99 chr5 144596919 144597138 -55033012 + L1MC/D LINE L1 5398 5619 -2189 2172 153 8 16 chr5 144597138 144597503 -55032647 + THE1B LTR MaLR 1 362 -2 433 254 99 99 chr5 144597503 144597705 -55032445 + L1MC/D LINE L1 5618 5819 -1989 657 294 117 19 chr5 144597775 144598135 -55032015 + MLT1J2 LTR MaLR 56 450 0 210 133 67 44 chr5 144598173 144598263 -55031887 + (TTATA)n Simple_repeat Simple_repeat 3 94 0 701 262 18 0 chr5 144601097 144601261 -55028889 + MER45A DNA AcHobo 12 178 0 208 266 47 16 chr5 144602063 144602127 -55028023 - MER5B DNA MER1_type -64 114 49 1928 141 7 3 chr5 144602149 144602453 -55027697 - AluSx SINE Alu -5 307 3 29 28 0 0 chr5 144602731 144602767 -55027383 + AT_rich Low_complexity Low_complexity 1 36 0 43 71 0 0 chr5 144605171 144605256 -55024894 + AT_rich Low_complexity Low_complexity 1 85 0 752 281 86 3 chr5 144606079 144606453 -55023697 + L1M4 LINE L1 2167 2571 -3575 4318 133 27 1 chr5 144606472 144607521 -55022629 - L1PA12 LINE L1 -249 5919 4849 356 115 0 0 chr5 144607518 144607570 -55022580 + L1PB1 LINE L1 5481 5532 -619 * 1613 86 0 0 chr5 144607670 144607891 -55022259 + L1PB1 LINE L1 5555 5775 -376 267 119 0 76 chr5 144607915 144608033 -55022117 + (TA)n Simple_repeat Simple_repeat 1 109 0 313 221 22 55 chr5 144608035 144608216 -55021934 + (CATA)n Simple_repeat Simple_repeat 2 176 0 * 401 167 0 96 chr5 144608081 144608279 -55021871 + (TA)n Simple_repeat Simple_repeat 1 179 0 277 134 58 64 chr5 144608291 144608462 -55021688 + (CGATA)n Simple_repeat Simple_repeat 3 172 0 * 463 132 0 137 chr5 144608363 144608567 -55021583 + (TATATG)n Simple_repeat Simple_repeat 5 180 0 268 137 0 77 chr5 144608584 144608767 -55021383 + (TA)n Simple_repeat Simple_repeat 2 170 0 250 163 43 33 chr5 144608769 144608861 -55021289 + (CATATA)n Simple_repeat Simple_repeat 4 96 0 263 139 0 76 chr5 144608863 144609035 -55021115 + (TA)n Simple_repeat Simple_repeat 1 159 0 2212 148 3 3 chr5 144609036 144609407 -55020743 + L1PB1 LINE L1 5780 6150 -1 1055 268 31 48 chr5 144609422 144610088 -55020062 + L1ME3A LINE L1 4993 5648 -514 326 260 75 7 chr5 144610128 144610363 -55019787 + L1ME3A LINE L1 5850 6161 -9 22 0 0 0 chr5 144611201 144611223 -55018927 + AT_rich Low_complexity Low_complexity 1 22 0 1188 264 44 48 chr5 144611780 144612241 -55017909 - MLT1F LTR MaLR -21 546 8 370 243 118 15 chr5 144612280 144612416 -55017734 - MIR SINE MIR -49 213 64 24 0 0 0 chr5 144612684 144612708 -55017442 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 144613672 144613701 -55016449 + AT_rich Low_complexity Low_complexity 1 29 0 26 64 0 0 chr5 144614078 144614125 -55016025 + AT_rich Low_complexity Low_complexity 1 47 0 286 256 12 0 chr5 144614125 144614207 -55015943 + L1ME LINE L1 5531 5613 -508 22 35 0 0 chr5 144614261 144614290 -55015860 + AT_rich Low_complexity Low_complexity 1 29 0 3261 110 16 58 chr5 144615286 144615860 -55014290 - L1PA13 LINE L1 -20 6143 5594 1306 177 0 0 chr5 144615917 144616137 -55014013 - AluJb SINE Alu -8 304 85 319 309 103 55 chr5 144617310 144617728 -55012422 - L1ME4a LINE L1 -103 6087 5650 389 322 41 47 chr5 144617732 144617903 -55012247 - MER5B DNA MER1_type -6 172 3 277 288 121 20 chr5 144617920 144618166 -55011984 - L1ME4a LINE L1 -675 5515 5358 269 306 92 13 chr5 144618542 144618583 -55011567 - L1ME4a LINE L1 -4753 1643 1607 2155 103 0 0 chr5 144618583 144618864 -55011286 - AluSg SINE Alu -11 299 19 269 306 92 13 chr5 144618864 144619051 -55011099 - L1ME4a LINE L1 -4789 1607 1397 384 242 11 101 chr5 144619828 144620006 -55010144 - L2 LINE L2 0 3313 3152 1603 162 3 44 chr5 144620557 144620872 -55009278 - MER50 LTR ERV1 0 734 433 1278 159 22 9 chr5 144620866 144621092 -55009058 - MER50 LTR ERV1 -505 229 1 * 335 335 66 30 chr5 144621170 144621337 -55008813 - MIR SINE MIR -41 221 49 839 251 39 51 chr5 144621572 144621907 -55008243 + MLT1D LTR MaLR 1 331 -174 1230 173 5 18 chr5 144621909 144622129 -55008021 + AluJb SINE Alu 86 302 -10 189 107 0 0 chr5 144622129 144622157 -55007993 + (GGGGA)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr5 144622366 144622388 -55007762 + AT_rich Low_complexity Low_complexity 1 22 0 528 215 53 75 chr5 144622570 144622728 -55007422 + MLT1J2 LTR MaLR 65 205 -245 205 205 0 0 chr5 144622876 144622915 -55007235 + (TA)n Simple_repeat Simple_repeat 2 40 0 1514 309 125 18 chr5 144622952 144623929 -55006221 - L2 LINE L2 0 3313 2213 1321 264 98 18 chr5 144624063 144624124 -55006026 + MER20B DNA MER1_type 215 270 -513 2585 103 11 0 chr5 144624124 144624484 -55005666 + THE1B LTR MaLR 1 364 0 1321 264 98 18 chr5 144624484 144624934 -55005216 + MER20B DNA MER1_type 270 767 -16 914 256 24 111 chr5 144624955 144625334 -55004816 - L2 LINE L2 -1148 2166 1821 337 240 0 0 chr5 144625346 144625421 -55004729 + L1MEc LINE L1 49 123 -6273 893 299 102 14 chr5 144626633 144627166 -55002984 + L1M3a LINE L1 2 616 -5339 302 289 0 0 chr5 144627164 144627247 -55002903 - L1 LINE L1 -2331 3815 3733 * 9280 80 2 1 chr5 144627299 144628558 -55001592 - L1PA15 LINE L1 -1463 4683 3424 1908 110 0 3 chr5 144628555 144628837 -55001313 + L1PA15 LINE L1 4710 4990 -1156 * 1044 153 19 0 chr5 144628837 144628994 -55001156 - AluSx SINE Alu -152 160 1 3040 212 7 31 chr5 144628999 144629683 -55000467 - L1P LINE L1 -1827 4319 3652 1678 171 66 23 chr5 144629740 144629751 -55000399 + L1MB7 LINE L1 5767 5776 -408 3034 140 11 0 chr5 144629751 144630223 -54999927 + L1PA15 LINE L1 5688 6164 -1 1678 171 66 23 chr5 144630223 144630603 -54999547 + L1MB7 LINE L1 5776 6175 -9 7826 177 41 28 chr5 144630605 144631478 -54998672 + L1MA9 LINE L1 3269 4129 -2183 741 28 47 0 chr5 144631478 144631584 -54998566 + (GAAA)n Simple_repeat Simple_repeat 1 111 0 7826 177 41 28 chr5 144631584 144632294 -54997856 + L1MA9 LINE L1 4129 4828 -1484 2539 114 6 0 chr5 144632294 144632654 -54997496 - THE1B LTR MaLR -2 362 1 9759 101 39 67 chr5 144632654 144633745 -54996405 - THE1B-int LTR MaLR 0 1580 546 213 39 0 0 chr5 144633745 144633771 -54996379 + (TTTTC)n Simple_repeat Simple_repeat 5 30 0 9759 101 39 67 chr5 144633771 144634303 -54995847 - THE1B-int LTR MaLR -1034 546 1 2489 126 14 0 chr5 144634303 144634660 -54995490 - THE1B LTR MaLR 0 364 3 7826 177 41 28 chr5 144634660 144635143 -54995007 + L1MA9 LINE L1 4828 5303 -1009 2688 39 0 0 chr5 144635143 144635454 -54994696 + AluY SINE Alu 1 311 0 7826 177 41 28 chr5 144635454 144636373 -54993777 + L1MA9 LINE L1 5303 6312 0 239 287 63 35 chr5 144636411 144636554 -54993596 + L2 LINE L2 2596 2742 -572 362 327 13 7 chr5 144636612 144636762 -54993388 - LTR16C LTR ERVL -33 458 308 2127 116 0 0 chr5 144638464 144638776 -54991374 + AluSx SINE Alu 1 312 0 261 324 121 29 chr5 144639201 144639374 -54990776 - MIR SINE MIR -26 236 48 822 269 50 92 chr5 144640411 144640946 -54989204 - MER34 LTR ERV1 -29 513 1 187 264 32 128 chr5 144641101 144641226 -54988924 + L2 LINE L2 2447 2559 -755 697 332 61 9 chr5 144641266 144641495 -54988655 + MIR SINE MIR 1 241 -21 406 317 122 47 chr5 144641569 144642117 -54988033 + L2 LINE L2 2670 3255 -58 266 28 56 42 chr5 144642725 144642796 -54987354 + (TTATA)n Simple_repeat Simple_repeat 4 75 0 243 289 61 18 chr5 144643393 144643507 -54986643 - L2 LINE L2 0 3313 3195 3977 209 43 10 chr5 144643557 144643981 -54986169 + MER21B LTR ERV1 1 409 -454 2896 126 114 31 chr5 144643981 144644445 -54985705 - LTR24C LTR ERV1 0 635 110 1924 104 3 58 chr5 144644445 144644753 -54985397 + AluSx SINE Alu 2 292 -20 2896 126 114 31 chr5 144644753 144644874 -54985276 - LTR24C LTR ERV1 -525 110 1 3977 209 43 10 chr5 144644874 144645263 -54984887 + MER21B LTR ERV1 409 841 -22 1206 259 43 13 chr5 144645474 144645868 -54984282 - HsTC2 DNA Tc2 -11 1887 1306 360 246 139 16 chr5 144645903 144646025 -54984125 - HsTC2 DNA Tc2 -1758 140 4 2132 124 0 3 chr5 144646101 144646443 -54983707 + AluSx SINE Alu 3 312 0 279 302 12 12 chr5 144646711 144646797 -54983353 - MIR3 SINE MIR -6 202 117 998 244 28 0 chr5 144647091 144647308 -54982842 + MER58A DNA MER1_type 1 223 -1 190 294 201 43 chr5 144648909 144649093 -54981057 + L3b LINE CR1 1367 1579 -4 1392 162 165 26 chr5 144651049 144651474 -54978676 - LTR54B LTR ERV1 -1 497 14 271 250 67 42 chr5 144651489 144651609 -54978541 - L1MEd LINE L1 -5984 135 13 24 0 0 0 chr5 144653279 144653303 -54976847 + AT_rich Low_complexity Low_complexity 1 24 0 28 29 0 0 chr5 144653706 144653741 -54976409 + AT_rich Low_complexity Low_complexity 1 35 0 547 230 50 22 chr5 144653742 144653941 -54976209 + L1MC4a LINE L1 5673 5886 -303 503 235 112 16 chr5 144654000 144654187 -54975963 - L2 LINE L2 -4 3309 3105 320 283 86 10 chr5 144654274 144654472 -54975678 + L1MC4a LINE L1 6049 6261 -1547 374 255 106 0 chr5 144654759 144654853 -54975297 - MER69A DNA AcHobo -16 161 58 1070 275 82 99 chr5 144654922 144655701 -54974449 + L1MC4 LINE L1 6703 7456 -586 2096 99 0 68 chr5 144655701 144656025 -54974125 - AluSc SINE Alu -7 302 1 1070 275 82 99 chr5 144656025 144656461 -54973689 + L1MC4 LINE L1 7456 7898 -144 26 0 0 0 chr5 144657039 144657065 -54973085 + AT_rich Low_complexity Low_complexity 1 26 0 1773 15 0 0 chr5 144658541 144658741 -54971409 - L1P1 LINE L1 -471 5684 5485 3493 17 5 0 chr5 144658741 144659144 -54971006 + L1PA3 LINE L1 5746 6155 0 249 296 112 46 chr5 144659157 144659309 -54970841 + MIR3 SINE MIR 20 181 -27 793 298 93 2 chr5 144659454 144659807 -54970343 + LTR16A LTR ERVL 57 457 0 779 322 30 38 chr5 144659859 144660285 -54969865 + HERV16 LTR ERVL 74 496 -4500 1176 301 40 12 chr5 144660459 144660858 -54969292 + HERV16 LTR ERVL 709 1118 -3878 1754 151 60 0 chr5 144660881 144661165 -54968985 + AluSx SINE Alu 1 301 -11 1045 254 78 16 chr5 144661509 144661828 -54968322 - L1MEc LINE L1 -5603 793 455 448 68 27 0 chr5 144661866 144661939 -54968211 + (TC)n Simple_repeat Simple_repeat 2 76 0 282 258 21 21 chr5 144661956 144662049 -54968101 - L1MEc LINE L1 -6015 381 289 543 202 21 6 chr5 144662130 144662386 -54967764 + AluJo SINE Alu 4 305 -7 28762 116 16 16 chr5 144664553 144669071 -54961079 + L1P LINE L1 11 4527 -1619 4480 151 24 32 chr5 144669071 144670053 -54960097 + MER11C LTR ERVK 1 1065 -6 6666 74 6 0 chr5 144670060 144671674 -54958476 + L1PA7 LINE L1 4523 6141 -13 403 325 8 0 chr5 144671828 144671948 -54958202 - L2 LINE L2 -1 3312 3192 275 284 110 0 chr5 144672927 144673036 -54957114 + MER94 DNA DNA 14 134 0 22 0 0 0 chr5 144673489 144673511 -54956639 + AT_rich Low_complexity Low_complexity 1 22 0 407 313 229 8 chr5 144673855 144674095 -54956055 - L2 LINE L2 -1 3312 3020 631 342 74 15 chr5 144675578 144675847 -54954303 + L2 LINE L2 219 503 -2811 2812 279 110 30 chr5 144675847 144676168 -54953982 + L2 LINE L2 1897 2191 -1122 311 22 0 44 chr5 144676168 144676213 -54953937 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2812 279 110 30 chr5 144676213 144677189 -54952961 + L2 LINE L2 2191 3305 -8 869 199 12 0 chr5 144677504 144677670 -54952480 + L1PA16 LINE L1 5995 6162 -4 193 308 79 49 chr5 144677931 144678291 -54951859 - L2 LINE L2 -647 2667 2232 280 191 0 0 chr5 144782468 144782515 -54847635 + MIR SINE MIR 203 249 -13 477 153 24 0 chr5 144782707 144782792 -54847358 - Tigger5 DNA MER2_type 0 2323 2237 523 193 0 0 chr5 144782802 144782890 -54847260 + Tigger5 DNA MER2_type 1 88 -2235 353 353 44 13 chr5 144784188 144784413 -54845737 + MIR SINE MIR 2 231 -31 7226 94 4 14 chr5 144784803 144786670 -54843480 - L1PA7 LINE L1 0 6154 4303 5448 26 3 0 chr5 144786670 144787307 -54842843 - L1PA2 LINE L1 -3 6152 5510 7532 104 7 2 chr5 144787307 144788481 -54841669 - L1PA7 LINE L1 -1851 4295 3116 482 246 120 6 chr5 144789300 144789475 -54840675 - MLT1H LTR MaLR 0 595 346 13964 143 14 109 chr5 144789696 144793147 -54837003 - L1P LINE L1 -3012 3134 11 509 290 98 40 chr5 144793379 144793603 -54836547 - MIR SINE MIR -6 256 20 347 311 60 13 chr5 144794212 144794363 -54835787 + MIR SINE MIR 50 207 -55 1097 248 0 4 chr5 144794889 144795119 -54835031 - MIR SINE MIR -5 257 29 23 68 0 0 chr5 144795824 144795868 -54834282 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr5 144796517 144796547 -54833603 + AT_rich Low_complexity Low_complexity 1 30 0 1186 180 0 10 chr5 144796696 144796912 -54833238 - AluJo SINE Alu 0 306 93 1273 104 5 0 chr5 144799611 144799803 -54830347 + L1MA2 LINE L1 5782 5974 -330 2209 105 12 0 chr5 144802819 144803152 -54826998 + L1MA2 LINE L1 5968 6304 0 25994 129 13 25 chr5 144803304 144805427 -54824723 - L1PA8 LINE L1 0 6487 4340 2202 126 3 0 chr5 144805427 144805736 -54824414 - AluSx SINE Alu -2 310 1 25994 129 13 25 chr5 144805736 144807265 -54822885 - L1PA8 LINE L1 -2147 4340 2794 2176 108 0 48 chr5 144807265 144807579 -54822571 - AluSp SINE Alu -14 299 1 25994 129 13 25 chr5 144807579 144810437 -54819713 - L1PA8 LINE L1 -3693 2794 10 369 173 25 0 chr5 144811006 144811087 -54819063 + MER103 DNA DNA 59 141 -25 823 131 0 98 chr5 144811088 144811271 -54818879 + MER30 DNA MER1_type 1 165 -65 316 135 0 0 chr5 144811372 144811424 -54818726 - MER65B LTR ERV1 -479 52 1 1273 280 7 26 chr5 144811424 144811842 -54818308 - MER65B-int LTR ERV1 0 4871 4462 10364 40 4 0 chr5 144811851 144813894 -54816256 - L1PA5 LINE L1 -3 6151 4104 750 171 151 96 chr5 144813912 144814061 -54816089 - MER65B-int LTR ERV1 -3309 3289 3150 378 0 0 0 chr5 144814061 144814103 -54816047 + (TA)n Simple_repeat Simple_repeat 1 42 0 750 171 151 96 chr5 144814103 144814442 -54815708 - MER65B-int LTR ERV1 -3448 3150 1546 24 32 0 0 chr5 144814463 144814494 -54815656 + AT_rich Low_complexity Low_complexity 1 31 0 11218 101 29 33 chr5 144814547 144814658 -54815492 - MER65A-int LTR ERV1 -2377 2494 2384 1571 145 0 125 chr5 144814658 144814995 -54815155 - AluJb SINE Alu -11 301 7 11218 101 29 33 chr5 144814995 144817327 -54812823 - MER65A-int LTR ERV1 -2487 2384 11 2156 151 122 7 chr5 144817327 144817737 -54812413 - MSTB2 LTR MaLR 0 457 1 2557 142 18 9 chr5 144817777 144818214 -54811936 - MER65A LTR ERV1 -4 441 1 1378 240 62 37 chr5 144818219 144818652 -54811498 - LTR16A1 LTR ERVL -13 444 1 191 210 48 81 chr5 144818747 144818809 -54811341 - L2 LINE L2 -8 3305 3246 2573 11 0 0 chr5 144819294 144819574 -54810576 + AluY SINE Alu 23 302 -9 558 302 33 58 chr5 144821215 144821333 -54808817 + MIR SINE MIR 8 118 -144 1673 156 56 17 chr5 144821333 144821621 -54808529 - AluJb SINE Alu -13 299 1 558 302 33 58 chr5 144821621 144821744 -54808406 + MIR SINE MIR 118 243 -19 341 260 39 39 chr5 144825099 144825226 -54804924 + MIR SINE MIR 100 226 -36 1167 140 53 18 chr5 144826189 144826417 -54803733 - MER46A DNA MER2_type 0 236 1 232 208 21 52 chr5 144826873 144827007 -54803143 + (CGAG)n Simple_repeat Simple_repeat 1 129 0 429 250 41 6 chr5 144827131 144827303 -54802847 + GA-rich Low_complexity Low_complexity 1 178 0 333 205 35 23 chr5 144827319 144827490 -54802660 + GA-rich Low_complexity Low_complexity 6 178 0 319 180 52 58 chr5 144827530 144827702 -54802448 + (CGGA)n Simple_repeat Simple_repeat 2 172 0 547 146 36 24 chr5 144828120 144828285 -54801865 + GA-rich Low_complexity Low_complexity 3 169 0 339 187 29 29 chr5 144828317 144828456 -54801694 + GA-rich Low_complexity Low_complexity 3 141 0 209 73 0 49 chr5 144829682 144829723 -54800427 + (CAGTG)n Simple_repeat Simple_repeat 3 41 0 460 120 73 50 chr5 144829768 144830076 -54800074 + (CAGTG)n Simple_repeat Simple_repeat 1 315 0 318 106 0 0 chr5 144832400 144832447 -54797703 + (TTC)n Simple_repeat Simple_repeat 2 48 0 248 129 43 29 chr5 144833802 144833872 -54796278 + GA-rich Low_complexity Low_complexity 2 72 0 386 123 91 32 chr5 144833892 144834046 -54796104 + (CGGA)n Simple_repeat Simple_repeat 4 166 0 182 35 92 81 chr5 144834075 144834162 -54795988 + (CACGA)n Simple_repeat Simple_repeat 4 91 0 225 147 57 73 chr5 144834165 144834342 -54795808 + (CGGA)n Simple_repeat Simple_repeat 1 174 0 283 205 22 60 chr5 144834500 144834685 -54795465 + C-rich Low_complexity Low_complexity 1 178 0 * 392 198 34 28 chr5 144834578 144834882 -54795268 + (CACAC)n Simple_repeat Simple_repeat 1 305 0 284 225 123 51 chr5 144835311 144835449 -54794701 - MIR SINE MIR -95 167 20 1459 150 47 38 chr5 144835758 144836078 -54794072 + MER33 DNA MER1_type 2 324 0 521 99 0 0 chr5 144836215 144836296 -54793854 - AluSp/q SINE Alu 0 313 233 872 143 77 6 chr5 144836402 144836584 -54793566 - MER33 DNA MER1_type -128 196 2 202 185 74 0 chr5 144836839 144836893 -54793257 + A-rich Low_complexity Low_complexity 1 58 0 294 255 99 50 chr5 144836898 144837039 -54793111 + MIR SINE MIR 20 167 -95 479 272 37 0 chr5 144837574 144837710 -54792440 - MIR SINE MIR -27 235 95 201 39 0 0 chr5 144838098 144838124 -54792026 + (A)n Simple_repeat Simple_repeat 1 26 0 2114 66 22 0 chr5 144838331 144838602 -54791548 + AluSg SINE Alu 29 305 -5 1912 121 3 34 chr5 144839228 144839551 -54790599 - AluSq SINE Alu 0 313 1 322 267 143 0 chr5 144840027 144840132 -54790018 + MIR SINE MIR 112 231 -31 384 313 67 71 chr5 144840358 144840450 -54789700 + L1M4c LINE L1 1639 1730 -4654 357 315 8 0 chr5 144840450 144840577 -54789573 + FLAM_C SINE Alu 1 128 -5 384 313 67 71 chr5 144840577 144840708 -54789442 + L1M4c LINE L1 1730 1861 -4523 772 264 131 53 chr5 144840767 144840907 -54789243 + L1M4c LINE L1 2030 2158 -4226 1775 157 92 15 chr5 144840907 144841245 -54788905 + THE1B LTR MaLR 1 364 0 772 264 131 53 chr5 144841245 144841464 -54788686 + L1M4c LINE L1 2158 2417 -3967 965 255 14 39 chr5 144841466 144841752 -54788398 + AluJb SINE Alu 24 302 -10 21 57 0 0 chr5 144841753 144841788 -54788362 + AT_rich Low_complexity Low_complexity 1 35 0 482 129 12 0 chr5 144842005 144842090 -54788060 + CT-rich Low_complexity Low_complexity 2 87 0 259 270 63 11 chr5 144842093 144842267 -54787883 + L1M4c LINE L1 2677 2859 -3523 238 190 0 17 chr5 144842267 144842325 -54787825 - MSTB1 LTR MaLR -5 427 371 262 269 22 45 chr5 144842340 144842474 -54787676 + L1 LINE L1 5164 5294 -852 435 145 0 0 chr5 144842475 144842537 -54787613 + AluS SINE Alu 1 62 -249 749 123 145 14 chr5 144842637 144842775 -54787375 - THE1C LTR MaLR -217 158 3 637 326 17 7 chr5 144842780 144843186 -54786964 - BSR/Beta Satellite Satellite -30 410 1 764 224 9 39 chr5 144843208 144844112 -54786038 - BSR/Beta Satellite Satellite 0 876 1 634 246 4 45 chr5 144844138 144844456 -54785694 - BSR/Beta Satellite Satellite 0 305 1 240 270 35 61 chr5 144844481 144844596 -54785554 - BSR/Beta Satellite Satellite -15 121 10 2248 63 0 0 chr5 144844684 144844969 -54785181 + AluY SINE Alu 1 285 -26 201 39 0 0 chr5 144844969 144844995 -54785155 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 394 185 40 31 chr5 144845057 144845381 -54784769 + CT-rich Low_complexity Low_complexity 1 326 0 649 163 30 31 chr5 144845545 144846090 -54784060 + CT-rich Low_complexity Low_complexity 1 544 0 266 174 41 25 chr5 144846107 144846228 -54783922 + CT-rich Low_complexity Low_complexity 1 123 0 401 0 20 0 chr5 144846395 144846444 -54783706 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 1051 203 85 8 chr5 144846448 144846684 -54783466 - AluJo SINE Alu -29 283 30 329 267 13 0 chr5 144848885 144848960 -54781190 - MER20 DNA MER1_type -60 159 84 193 176 29 0 chr5 144849080 144849114 -54781036 - MIR SINE MIR -69 193 159 2762 169 71 8 chr5 144849758 144850254 -54779896 - MER1A DNA MER1_type 0 527 1 1662 128 4 4 chr5 144850288 144850539 -54779611 - AluSx SINE Alu -61 251 1 231 305 24 49 chr5 144850563 144850645 -54779505 + L2 LINE L2 3234 3313 0 2055 106 0 0 chr5 144851046 144851407 -54778743 + AluSp SINE Alu 1 361 0 950 197 99 9 chr5 144853332 144853565 -54776585 + AluJo SINE Alu 30 283 -29 473 0 18 0 chr5 144853569 144853626 -54776524 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 266 174 41 25 chr5 144853794 144853915 -54776235 + GA-rich Low_complexity Low_complexity 1 123 0 530 181 37 26 chr5 144853973 144854881 -54775269 + GA-rich Low_complexity Low_complexity 1 918 0 411 186 23 29 chr5 144854924 144855096 -54775054 + GA-rich Low_complexity Low_complexity 2 172 0 425 180 17 36 chr5 144855119 144855429 -54774721 + GA-rich Low_complexity Low_complexity 1 303 0 565 254 115 38 chr5 144956001 144956289 -54673861 + L1MEc LINE L1 771 1080 -5316 3945 220 66 91 chr5 144956295 144957453 -54672697 - L1ME1 LINE L1 -186 5980 4794 2285 93 0 6 chr5 144957453 144957764 -54672386 - AluY SINE Alu -2 309 1 3945 220 66 91 chr5 144957764 144958277 -54671873 - L1ME1 LINE L1 -1372 4794 4270 2448 75 0 0 chr5 144958277 144958585 -54671565 + AluY SINE Alu 1 308 -3 207 0 0 0 chr5 144958585 144958608 -54671542 + (TA)n Simple_repeat Simple_repeat 1 23 0 3945 220 66 91 chr5 144958608 144959519 -54670631 - L1ME1 LINE L1 -1894 4272 3469 628 247 41 14 chr5 144959523 144959669 -54670481 + MLT1E1 LTR MaLR 1 150 -504 6538 24 0 0 chr5 144959724 144960486 -54669664 + L1PA4 LINE L1 5390 6151 -4 376 302 38 3 chr5 144960539 144960672 -54669478 + MLT1E2 LTR MaLR 214 396 -230 1897 326 53 22 chr5 144960860 144961215 -54668935 - L2 LINE L2 -424 2890 2548 3569 97 55 26 chr5 144961215 144961783 -54668367 - L1PB1 LINE L1 -3 6148 5565 1897 326 53 22 chr5 144961783 144962351 -54667799 - L2 LINE L2 -766 2548 1938 578 345 78 7 chr5 144963045 144963338 -54666812 - L2 LINE L2 -2338 976 663 339 230 0 0 chr5 144963899 144963986 -54666164 + GA-rich Low_complexity Low_complexity 4 90 0 2371 81 0 3 chr5 144965122 144965430 -54664720 + AluY SINE Alu 1 307 -4 277 311 67 0 chr5 144966048 144966167 -54663983 + L2 LINE L2 3183 3309 -4 262 320 13 0 chr5 144966502 144966577 -54663573 + L2 LINE L2 3227 3302 -11 1032 307 57 79 chr5 144966697 144966803 -54663347 + HAL1 LINE L1 1 108 -2399 2179 123 0 0 chr5 144966803 144967112 -54663038 + AluSg SINE Alu 1 309 -1 1032 307 57 79 chr5 144967112 144967773 -54662377 + HAL1 LINE L1 108 751 -1756 332 232 67 98 chr5 144967795 144967959 -54662191 + HAL1 LINE L1 2169 2327 -180 328 158 0 0 chr5 144967959 144968016 -54662134 - MLT2B1 LTR ERVL 0 520 464 1334 193 29 61 chr5 144968058 144968448 -54661702 - MLT2B1 LTR ERVL -43 371 1 6401 90 21 53 chr5 144968924 144969982 -54660168 + L1MA3 LINE L1 5282 6305 0 24 32 0 0 chr5 144970022 144970053 -54660097 + AT_rich Low_complexity Low_complexity 1 31 0 2063 141 0 0 chr5 144970059 144970356 -54659794 + AluSg SINE Alu 3 299 -11 249 270 161 44 chr5 144970451 144970588 -54659562 - MIR SINE MIR 0 262 110 776 179 138 31 chr5 144970600 144970796 -54659354 + MER20 DNA MER1_type 1 217 -2 451 300 77 53 chr5 144971441 144971894 -54658256 + L1MEc LINE L1 57 520 -5876 344 41 93 21 chr5 144972004 144972101 -54658049 + (TAGA)n Simple_repeat Simple_repeat 4 107 0 2520 245 43 30 chr5 144972101 144972916 -54657234 + L1ME2 LINE L1 5350 6334 0 1320 212 141 51 chr5 144973082 144973714 -54656436 + L1MC5 LINE L1 7242 7930 -31 380 218 139 0 chr5 144973835 144973936 -54656214 - MLT1I LTR MaLR -2 407 293 259 223 173 9 chr5 144974924 144975081 -54655069 + Charlie8 DNA MER1_type 29 203 -2214 2446 74 0 3 chr5 144975247 144975557 -54654593 + AluY SINE Alu 3 311 0 333 0 0 0 chr5 144976665 144976702 -54653448 + (TA)n Simple_repeat Simple_repeat 2 38 0 22 0 0 0 chr5 144978437 144978459 -54651691 + AT_rich Low_complexity Low_complexity 1 22 0 243 344 32 0 chr5 144980392 144980517 -54649633 + L1ME LINE L1 566 694 -5940 509 278 59 25 chr5 144981101 144981527 -54648623 + L1ME LINE L1 1286 1882 -4832 21 0 0 0 chr5 144981532 144981553 -54648597 + AT_rich Low_complexity Low_complexity 1 21 0 327 293 198 19 chr5 144982215 144982372 -54647778 + MIR3 SINE MIR 20 204 -4 29 0 0 0 chr5 144983755 144983784 -54646366 + AT_rich Low_complexity Low_complexity 1 29 0 3440 81 4 7 chr5 144984430 144984888 -54645262 + L1PA10 LINE L1 5656 6112 -56 457 202 12 0 chr5 144985084 144985168 -54644982 - LTR40b LTR ERVL 0 462 378 186 43 0 0 chr5 144985223 144985246 -54644904 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 195 292 0 0 chr5 144985418 144985466 -54644684 - MIR SINE MIR -31 231 184 249 218 0 0 chr5 144985683 144985761 -54644389 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 275 246 169 34 chr5 144986533 144986651 -54643499 - L2 LINE L2 -3 3310 3177 867 209 0 0 chr5 144988074 144988232 -54641918 + FRAM SINE Alu 1 158 -18 249 313 137 60 chr5 144989138 144989209 -54640941 - L2 LINE L2 -1 3312 3248 2426 60 0 7 chr5 144989209 144989509 -54640641 + AluY SINE Alu 2 299 -12 249 313 137 60 chr5 144989509 144989788 -54640362 - L2 LINE L2 -65 3248 2935 664 328 62 69 chr5 144989851 144990680 -54639470 - L2 LINE L2 -687 2627 1805 689 264 36 16 chr5 144990940 144991190 -54638960 + MER113 DNA MER1_type? 9 263 -258 440 330 95 11 chr5 144991545 144991724 -54638426 - L2 LINE L2 -4 3268 3075 271 269 176 16 chr5 144992013 144992140 -54638010 + MIR3 SINE MIR 10 155 -64 28 29 0 0 chr5 144992220 144992255 -54637895 + AT_rich Low_complexity Low_complexity 1 35 0 2264 92 7 16 chr5 144993254 144993559 -54636591 + AluSc SINE Alu 1 302 -7 430 258 86 37 chr5 144993779 144994023 -54636127 + HAL1 LINE L1 1274 1529 -978 3205 164 53 17 chr5 144994152 144994846 -54635304 + L1MCa LINE L1 767 1485 -4941 265 254 63 35 chr5 144995125 144995267 -54634883 + HAL1b LINE L1 746 891 -457 1716 160 33 27 chr5 144995296 144995596 -54634554 + AluJo SINE Alu 1 302 -10 356 330 36 67 chr5 144995668 144995998 -54634152 + HAL1 LINE L1 2188 2507 0 21 0 0 0 chr5 144996021 144996042 -54634108 + AT_rich Low_complexity Low_complexity 1 21 0 249 395 25 0 chr5 144996585 144996704 -54633446 + MIR SINE MIR 16 137 -71 18854 160 61 22 chr5 144997544 145000655 -54629495 + L1MA1 LINE L1 24 3015 -4706 2289 76 10 3 chr5 145000655 145000956 -54629194 + AluY SINE Alu 1 303 -8 18854 160 61 22 chr5 145000956 145003884 -54626266 + L1MA1 LINE L1 3015 5830 -1891 2086 129 3 0 chr5 145003884 145004171 -54625979 + AluSx SINE Alu 1 288 -24 186 43 0 0 chr5 145004181 145004204 -54625946 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 18854 160 61 22 chr5 145004204 145004651 -54625499 + L1MA1 LINE L1 5838 6266 -1455 1873 142 137 13 chr5 145004651 145005032 -54625118 - MSTA LTR MaLR 0 428 1 18854 160 61 22 chr5 145005032 145005922 -54624228 + L1MA1 LINE L1 6266 7714 -7 278 264 0 23 chr5 145005995 145006082 -54624068 - MLT1I LTR MaLR 0 409 325 695 366 75 20 chr5 145007885 145008399 -54621751 + L2 LINE L2 2771 3313 0 21 0 0 0 chr5 145008787 145008808 -54621342 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 145008898 145008921 -54621229 + AT_rich Low_complexity Low_complexity 1 23 0 1937 142 50 29 chr5 145008965 145009540 -54620610 - LTR8 LTR ERV1 -14 677 1 22 0 0 0 chr5 145010013 145010035 -54620115 + AT_rich Low_complexity Low_complexity 1 22 0 382 283 112 58 chr5 145010046 145010269 -54619881 - L2 LINE L2 -777 2537 2303 1805 154 161 40 chr5 145010799 145011202 -54618948 + LTR47A LTR ERVL 1 452 0 4953 98 10 10 chr5 145011596 145012287 -54617863 + LTR8 LTR ERV1 1 691 0 180 0 0 0 chr5 145012842 145012862 -54617288 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 7167 53 1 2 chr5 145012874 145014242 -54615908 + L1PA5 LINE L1 4779 6151 -3 22 0 0 0 chr5 145015400 145015422 -54614728 + AT_rich Low_complexity Low_complexity 1 22 0 232 167 150 0 chr5 145016220 145016280 -54613870 + MIR SINE MIR 79 147 -115 3474 180 29 9 chr5 145016314 145017009 -54613141 + MER67C LTR ERV1 1 709 -1 586 318 87 12 chr5 145017477 145017719 -54612431 - MIR SINE MIR -1 261 2 561 317 42 28 chr5 145018422 145018706 -54611444 + L1MEd LINE L1 437 724 -5395 375 167 50 0 chr5 145018949 145019028 -54611122 + MER67C LTR ERV1 216 395 -266 2023 106 17 34 chr5 145019090 145019382 -54610768 + AluSg SINE Alu 3 289 -21 224 333 27 47 chr5 145019699 145019849 -54610301 - L2 LINE L2 -1023 2291 2145 211 139 0 23 chr5 145021810 145021853 -54608297 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1976 223 30 12 chr5 145022390 145022868 -54607282 - MER68 LTR ERV1 0 562 1 26 0 0 0 chr5 145023462 145023488 -54606662 + AT_rich Low_complexity Low_complexity 1 26 0 372 283 57 0 chr5 145023546 145023652 -54606498 - MIR SINE MIR -74 188 77 1012 253 39 10 chr5 145023738 145024125 -54606025 - Charlie2 DNA MER1_type -25 2837 2440 1268 244 17 14 chr5 145024170 145024531 -54605619 - Charlie2 DNA MER1_type -645 2217 1856 661 264 14 114 chr5 145024522 145024882 -54605268 - Charlie2 DNA MER1_type -2532 330 7 * 323 323 62 23 chr5 145024949 145025079 -54605071 + L2 LINE L2 3136 3270 -2 579 62 0 0 chr5 145025206 145025286 -54604864 + (TA)n Simple_repeat Simple_repeat 1 80 0 42204 38 21 5 chr5 145027106 145031319 -54598831 + L1PA3 LINE L1 1 4349 -1806 2536 36 0 13 chr5 145031319 145031625 -54598525 - AluY SINE Alu -9 302 1 42204 38 21 5 chr5 145031625 145033463 -54596687 + L1PA3 LINE L1 4349 6155 0 24 0 0 0 chr5 145033593 145033617 -54596533 + AT_rich Low_complexity Low_complexity 1 24 0 368 349 74 56 chr5 145033820 145034304 -54595846 + HAL1 LINE L1 1113 1605 -902 19506 124 12 89 chr5 145034528 145038671 -54591479 - L1P LINE L1 -2315 3831 12 2918 226 55 24 chr5 145040071 145041074 -54589076 - L1ME2 LINE L1 0 6164 5135 353 295 200 10 chr5 145041098 145041403 -54588747 - L1ME4a LINE L1 -227 5894 5532 670 50 20 10 chr5 145041752 145041851 -54588299 + (TAGA)n Simple_repeat Simple_repeat 2 101 0 295 262 28 19 chr5 145042395 145042502 -54587648 - MLT1L LTR MaLR -507 108 1 987 275 127 30 chr5 145042895 145043321 -54586829 + LTR33 LTR ERVL 54 520 -1 180 319 0 43 chr5 145044311 145044380 -54585770 + L2 LINE L2 3182 3247 -66 706 326 98 51 chr5 145045226 145045735 -54584415 + MLT1K LTR MaLR 33 565 -23 448 266 175 19 chr5 145048773 145048927 -54581223 + MER5B DNA MER1_type 1 178 0 1987 141 47 0 chr5 145049212 145049511 -54580639 + AluSq SINE Alu 1 313 0 237 305 106 20 chr5 145049624 145049775 -54580375 - MIR SINE MIR -25 237 74 1701 208 0 0 chr5 145051258 145051546 -54578604 - AluJb SINE Alu -20 292 5 361 95 0 16 chr5 145051861 145051924 -54578226 - L1PB1 LINE L1 0 6151 6090 5764 92 23 23 chr5 145051932 145052518 -54577632 - L1PB1 LINE L1 -3 6148 5546 3975 53 6 0 chr5 145052518 145053005 -54577145 - LTR2B LTR ERV1 0 490 1 5764 92 23 23 chr5 145053005 145053412 -54576738 - L1PB1 LINE L1 -604 5547 5141 5178 147 68 16 chr5 145053412 145055365 -54574785 - L1PBa LINE L1 -4660 2203 3 183 114 0 0 chr5 145055885 145055920 -54574230 + (TA)n Simple_repeat Simple_repeat 1 35 0 5922 77 0 30 chr5 145055938 145056742 -54573408 - LTR17 LTR ERV1 0 780 1 325 223 157 41 chr5 145056742 145056820 -54573330 - L2 LINE L2 -361 2952 2854 216 97 0 0 chr5 145056820 145056851 -54573299 + (GAGTG)n Simple_repeat Simple_repeat 4 34 0 325 223 157 41 chr5 145056851 145056893 -54573257 - L2 LINE L2 -459 2854 2818 1551 303 88 37 chr5 145057584 145058002 -54572148 - L2 LINE L2 -5 3308 2913 207 100 0 0 chr5 145058002 145058032 -54572118 + (GAGTG)n Simple_repeat Simple_repeat 1 30 0 1551 303 88 37 chr5 145058032 145058720 -54571430 - L2 LINE L2 -400 2913 2137 1625 186 20 119 chr5 145059221 145059624 -54570526 + MLT1F LTR MaLR 16 363 -179 2303 74 0 32 chr5 145059624 145059935 -54570215 + AluY SINE Alu 2 302 -9 1625 186 20 119 chr5 145059935 145060026 -54570124 + MLT1F LTR MaLR 363 461 -81 521 215 11 0 chr5 145060053 145060146 -54570004 - MER5B DNA MER1_type -32 146 53 1151 264 24 20 chr5 145060451 145060792 -54569358 + MER93a LTR ERV1 61 402 0 403 204 28 28 chr5 145061017 145061125 -54569025 - MLT1L LTR MaLR -7 608 501 198 103 0 0 chr5 145061311 145061340 -54568810 + (CA)n Simple_repeat Simple_repeat 2 30 0 573 269 41 20 chr5 145061867 145062064 -54568086 - MLT1H LTR MaLR -326 223 23 2467 48 0 0 chr5 145062657 145062952 -54567198 - AluY SINE Alu -16 295 1 218 317 0 29 chr5 145063502 145063606 -54566544 + GA-rich Low_complexity Low_complexity 5 105 0 697 144 15 0 chr5 145063854 145063986 -54566164 + CT-rich Low_complexity Low_complexity 2 135 0 948 178 183 0 chr5 145064996 145065193 -54564957 + Tigger3(Golem) DNA MER2_type 1 233 -2796 * 1338 94 64 13 chr5 145065190 145065423 -54564727 + Tigger3(Golem) DNA MER2_type 2464 2708 -321 2299 102 0 16 chr5 145066516 145066830 -54563320 - AluSq SINE Alu -4 309 1 384 161 9 116 chr5 145067474 145067586 -54562564 - MLT1J2 LTR MaLR -341 106 6 282 29 0 0 chr5 145067897 145067932 -54562218 + (CA)n Simple_repeat Simple_repeat 1 35 0 790 271 118 47 chr5 145068229 145069046 -54561104 + HAL1 LINE L1 4 1757 -750 275 329 117 12 chr5 145069560 145069800 -54560350 - MLT1K LTR MaLR -120 468 204 2154 125 10 0 chr5 145070100 145070395 -54559755 + AluSx SINE Alu 1 298 -14 234 0 0 0 chr5 145071356 145071382 -54558768 + (TA)n Simple_repeat Simple_repeat 2 27 0 38 22 0 0 chr5 145071443 145071488 -54558662 + AT_rich Low_complexity Low_complexity 1 45 0 357 250 52 87 chr5 145071759 145071931 -54558219 - L3 LINE CR1 -9 1568 1403 1298 210 32 40 chr5 145072796 145073014 -54557136 + L1MC4 LINE L1 6706 6921 -1121 231 103 0 0 chr5 145073014 145073053 -54557097 + (TAA)n Simple_repeat Simple_repeat 2 40 0 1298 210 32 40 chr5 145073053 145073205 -54556945 + L1MC4 LINE L1 6921 7073 -969 2712 179 43 28 chr5 145073205 145073741 -54556409 - MLT2B3 LTR ERVL -10 544 1 377 228 29 37 chr5 145073745 145073881 -54556269 + L1MC4 LINE L1 7101 7235 -807 1913 249 73 25 chr5 145073923 145074609 -54555541 + L1MC4 LINE L1 7324 8042 0 254 338 12 0 chr5 145074763 145074843 -54555307 + MIR SINE MIR 69 149 -59 236 340 127 47 chr5 145074838 145075050 -54555100 + L3 LINE CR1 1347 1575 -2 * 21 89 0 0 chr5 145075101 145075157 -54554993 + AT_rich Low_complexity Low_complexity 1 56 0 686 149 16 0 chr5 145075380 145075501 -54554649 - MLT1K-int LTR MaLR -1245 126 4 421 97 28 0 chr5 145075558 145075630 -54554520 + (TAGA)n Simple_repeat Simple_repeat 3 76 0 873 207 50 99 chr5 145075630 145075769 -54554381 - MLT2C1 LTR ERVL -59 338 194 243 0 0 0 chr5 145075769 145075796 -54554354 + (TC)n Simple_repeat Simple_repeat 2 28 0 * 513 0 0 0 chr5 145075795 145075852 -54554298 + (TG)n Simple_repeat Simple_repeat 2 58 0 873 207 50 99 chr5 145075796 145076055 -54554095 - MLT2C1 LTR ERVL -203 194 13 28 0 0 0 chr5 145076107 145076135 -54554015 + AT_rich Low_complexity Low_complexity 1 28 0 285 319 127 32 chr5 145077890 145078260 -54551890 - MLT1K LTR MaLR -12 576 172 5558 161 41 22 chr5 145078495 145078661 -54551489 - L1MA5A LINE L1 -12 6285 6124 2143 157 53 17 chr5 145078661 145079074 -54551076 - MSTA LTR MaLR 0 428 1 5558 161 41 22 chr5 145079074 145079190 -54550960 - L1MA5A LINE L1 -173 6124 6012 1686 158 66 30 chr5 145079190 145079552 -54550598 - THE1C LTR MaLR 0 375 1 9284 137 16 36 chr5 145079552 145081162 -54548988 - THE1C-int LTR MaLR 0 1580 4 1388 186 66 41 chr5 145081165 145081531 -54548619 - THE1C LTR MaLR 0 375 1 5558 161 41 22 chr5 145081531 145082016 -54548134 - L1MA5A LINE L1 -286 6011 5537 2153 131 3 0 chr5 145082016 145082321 -54547829 - AluSx SINE Alu -2 310 5 5558 161 41 22 chr5 145082321 145083147 -54547003 - L1MA5A LINE L1 -760 5537 4628 1775 186 0 3 chr5 145083147 145083466 -54546684 - AluJb SINE Alu 0 318 1 5558 161 41 22 chr5 145083466 145084033 -54546117 - L1MA5A LINE L1 -1669 4628 4073 1407 220 9 28 chr5 145084077 145084395 -54545755 - AluJo SINE Alu 0 312 1 377 173 0 0 chr5 145084395 145084470 -54545680 - L1MA5A LINE L1 -2065 4081 4007 3594 62 0 9 chr5 145084539 145085006 -54545144 + L1PA8 LINE L1 5710 6172 0 849 289 104 8 chr5 145085317 145085719 -54544431 + LTR16A LTR ERVL 7 447 -3 344 295 79 26 chr5 145085719 145086043 -54544107 + MLT1L LTR MaLR 127 480 -115 22 0 0 0 chr5 145086107 145086129 -54544021 + AT_rich Low_complexity Low_complexity 1 22 0 1552 172 106 42 chr5 145087077 145087256 -54542894 - Tigger2a DNA MER2_type -2274 434 268 7376 40 12 0 chr5 145087256 145088339 -54541811 - L1PA5 LINE L1 -1 6153 5068 1552 172 106 42 chr5 145088339 145088566 -54541584 - Tigger2a DNA MER2_type -2440 268 2 607 293 62 48 chr5 145088992 145089412 -54540738 - LTR67 LTR ERVL -96 461 36 181 365 56 44 chr5 145089683 145089932 -54540218 - L2 LINE L2 -212 3060 2809 470 260 98 29 chr5 145090592 145090765 -54539385 + MIR SINE MIR 8 192 -70 212 31 62 0 chr5 145091164 145091196 -54538954 + T-rich Low_complexity Low_complexity 3 36 0 343 315 76 9 chr5 145091592 145091822 -54538328 - L1MC/D LINE L1 -509 5657 5472 820 381 84 14 chr5 145091871 145092751 -54537399 - L1MC/D LINE L1 -745 5401 4460 580 269 87 52 chr5 145092756 145093202 -54536948 + LTR37B LTR ERV1 7 468 0 299 295 48 24 chr5 145093244 145093451 -54536699 - L1MC/D LINE L1 -1727 4419 4208 206 271 0 17 chr5 145093623 145093682 -54536468 - MIR SINE MIR -52 210 153 297 0 0 0 chr5 145094327 145094360 -54535790 + (CA)n Simple_repeat Simple_repeat 2 34 0 887 240 77 10 chr5 145094473 145094681 -54535469 + MER58A DNA MER1_type 2 223 -1 332 337 60 16 chr5 145094822 145095074 -54535076 - L1ME LINE L1 -503 5618 5356 779 178 22 16 chr5 145095506 145095691 -54534459 + MER53 DNA DNA 4 189 0 464 273 120 0 chr5 145096455 145096605 -54533545 - MIR SINE MIR -74 188 21 252 277 119 0 chr5 145096737 145096838 -54533312 + MLT1L LTR MaLR 168 280 -335 245 325 155 16 chr5 145097142 145097336 -54532814 - MIR SINE MIR -6 256 36 21 57 0 0 chr5 145098591 145098626 -54531524 + AT_rich Low_complexity Low_complexity 1 35 0 5987 239 49 52 chr5 145098660 145100395 -54529755 + L1M2 LINE L1 1 1732 -5117 2241 108 0 0 chr5 145100395 145100691 -54529459 - AluY SINE Alu -15 296 1 5987 239 49 52 chr5 145100691 145100872 -54529278 + L1M2 LINE L1 1732 1912 -4937 13453 202 36 22 chr5 145100887 145102954 -54527196 + L1PB2 LINE L1 6 2042 -4825 4589 132 50 4 chr5 145102954 145103699 -54526451 - MER4E LTR ERV1 0 779 1 13453 202 36 22 chr5 145103699 145104069 -54526081 + L1PB2 LINE L1 2042 2405 -4462 1817 111 93 29 chr5 145104069 145104348 -54525802 + AluSp SINE Alu 1 297 -16 13453 202 36 22 chr5 145104348 145108143 -54522007 + L1PB2 LINE L1 2405 6469 -398 504 0 0 0 chr5 145108143 145108199 -54521951 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 13453 202 36 22 chr5 145108199 145108593 -54521557 + L1PB2 LINE L1 6469 6856 -11 11485 221 37 16 chr5 145108608 145112565 -54517585 + L1M2 LINE L1 1882 5924 -924 1638 176 44 16 chr5 145112568 145112931 -54517219 - LTR52 LTR ERVL -48 373 1 1626 139 51 53 chr5 145113169 145113544 -54516606 + THE1C LTR MaLR 2 375 0 400 351 89 5 chr5 145113820 145114022 -54516128 - MIR SINE MIR 0 262 44 214 295 74 42 chr5 145115163 145115258 -54514892 - MIR SINE MIR -75 133 36 1797 112 133 24 chr5 145115266 145115604 -54514546 + THE1C LTR MaLR 1 375 0 9013 126 39 8 chr5 145115604 145117070 -54513080 + THE1C-int LTR MaLR 1 1511 -69 * 40845 32 21 1 chr5 145117069 145123100 -54507050 + L1HS LINE L1 2 6155 0 28 0 0 0 chr5 145123100 145123128 -54507022 + AT_rich Low_complexity Low_complexity 1 28 0 435 122 0 12 chr5 145123128 145123210 -54506940 + THE1C-int LTR MaLR 1500 1580 0 2136 117 61 19 chr5 145123210 145123569 -54506581 + THE1C LTR MaLR 1 374 -1 813 204 29 132 chr5 145123701 145123981 -54506169 - MIR SINE MIR 0 262 12 1470 199 50 14 chr5 145123989 145124270 -54505880 + AluJo SINE Alu 4 294 -18 222 273 34 68 chr5 145124299 145124387 -54505763 + MIR SINE MIR 159 243 -19 207 0 0 0 chr5 145125691 145125714 -54504436 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 618 271 164 10 chr5 145126198 145126405 -54503745 + MIR SINE MIR 5 243 -19 789 219 0 0 chr5 145130358 145130568 -54499582 + L1MB3 LINE L1 2594 2803 -4046 3584 208 53 8 chr5 145130580 145131538 -54498612 + L1MB3 LINE L1 2926 3926 -2922 337 325 5 21 chr5 145131630 145131824 -54498326 - L1MC4a LINE L1 -1834 5974 5784 2139 202 30 6 chr5 145131851 145132391 -54497759 + L1MB3 LINE L1 3899 4451 -2397 4643 43 0 0 chr5 145132391 145132946 -54497204 + L1PA5 LINE L1 5588 6146 -8 3565 192 32 20 chr5 145132951 145134328 -54495822 + L1MB3 LINE L1 5062 6465 -408 2401 82 0 3 chr5 145134328 145134631 -54495519 + AluY SINE Alu 1 302 -9 3565 192 32 20 chr5 145134631 145134675 -54495475 + L1MB3 LINE L1 6465 6507 -366 5076 127 29 7 chr5 145134689 145135563 -54494587 - L1PA16 LINE L1 -9 6157 5265 2990 183 49 2 chr5 145135564 145136197 -54493953 - MSTA-int LTR MaLR -988 663 1 2492 145 39 0 chr5 145136246 145136654 -54493496 - MSTA LTR MaLR 0 428 5 5251 238 60 32 chr5 145136705 145138485 -54491665 - L1P LINE L1 -2451 3695 1854 12224 28 5 0 chr5 145138485 145140714 -54489436 + L1PA3 LINE L1 3920 6155 0 5251 238 60 32 chr5 145140714 145140914 -54489236 - L1P LINE L1 -4292 1854 1661 349 205 17 17 chr5 145140899 145141010 -54489140 + L1MB3 LINE L1 6477 6587 -277 * 1527 217 60 0 chr5 145141020 145141384 -54488766 + LTR32 LTR ERVL 18 403 -68 230 146 42 42 chr5 145141444 145141492 -54488658 + MIR3 SINE MIR 151 198 -10 31 0 0 0 chr5 145142032 145142063 -54488087 + AT_rich Low_complexity Low_complexity 1 31 0 1036 65 78 0 chr5 145142066 145142220 -54487930 + MER51B LTR ERV1 212 377 0 4219 150 39 5 chr5 145142275 145143064 -54487086 + MER51-int LTR ERV1 691 1506 -6310 233 204 0 0 chr5 145143073 145143117 -54487033 + MER4A LTR ERV1 55 98 -566 654 189 55 61 chr5 145143159 145143323 -54486827 + MER4A LTR ERV1 372 534 -130 2562 77 29 18 chr5 145143323 145143765 -54486385 + MER51-int LTR ERV1 1806 2252 -5564 212 250 39 0 chr5 145143781 145143833 -54486317 + L3 LINE CR1 656 709 -868 2712 52 0 0 chr5 145144205 145144569 -54485581 + L1PA3 LINE L1 5811 6174 0 296 250 28 0 chr5 145144581 145144689 -54485461 + L1MB3 LINE L1 5117 5227 -919 570 274 0 14 chr5 145144713 145144859 -54485291 + FRAM SINE Alu 17 160 -16 4657 162 13 29 chr5 145144910 145145868 -54484282 + L1MB3 LINE L1 5236 6180 -3 610 278 57 19 chr5 145147958 145148167 -54481983 + MIR SINE MIR 28 244 -18 3664 85 10 0 chr5 145149773 145150267 -54479883 + L1PA10 LINE L1 5655 6153 -15 26 0 0 0 chr5 145151610 145151636 -54478514 + AT_rich Low_complexity Low_complexity 1 26 0 1956 151 3 17 chr5 145151770 145152068 -54478082 + AluSx SINE Alu 1 294 -18 1797 157 58 25 chr5 145153989 145154352 -54475798 - THE1C LTR MaLR 0 375 1 622 337 65 25 chr5 145155188 145155589 -54474561 - LTR16C LTR ERVL -39 452 36 553 258 90 18 chr5 145155754 145155921 -54474229 - MIR SINE MIR -12 250 72 2332 108 0 9 chr5 145156200 145156515 -54473635 - AluSx SINE Alu 0 312 1 198 167 0 0 chr5 145157462 145157498 -54472652 + (CA)n Simple_repeat Simple_repeat 1 36 0 342 0 0 0 chr5 145157831 145157869 -54472281 + (CA)n Simple_repeat Simple_repeat 1 38 0 2226 104 111 18 chr5 145158480 145158929 -54471221 + LTR14B LTR ERVK 1 608 0 2305 122 0 0 chr5 145158951 145159254 -54470896 - AluSg SINE Alu -7 303 1 502 297 88 119 chr5 145159655 145160110 -54470040 + L2 LINE L2 2830 3270 -2 760 204 16 5 chr5 145161262 145161448 -54468702 + MER53 DNA DNA 2 189 0 338 210 0 219 chr5 145162426 145162645 -54467505 + MIR SINE MIR 90 260 -2 290 230 70 40 chr5 145163885 145163985 -54466165 + MIR SINE MIR 145 247 -15 260 280 77 7 chr5 145165302 145165445 -54464705 + L1M3 LINE L1 5731 5883 -297 245 302 13 31 chr5 145165688 145165913 -54464237 + L1M4 LINE L1 4204 4424 -1722 2122 111 3 10 chr5 145166398 145166686 -54463464 - AluSx SINE Alu -26 286 1 1079 83 0 0 chr5 145166688 145166820 -54463330 - AluSq/x SINE Alu -181 132 1 28 0 0 0 chr5 145169712 145169740 -54460410 + AT_rich Low_complexity Low_complexity 1 28 0 605 254 37 49 chr5 145171211 145171455 -54458695 - MLT1J2 LTR MaLR -209 241 1 488 275 179 34 chr5 145171585 145171909 -54458241 - MLT1L LTR MaLR -206 409 39 570 320 81 22 chr5 145172078 145172484 -54457666 + L1ME LINE L1 2335 2764 -3382 503 229 93 27 chr5 145172508 145172840 -54457310 + L1ME LINE L1 2897 3250 -2896 364 169 22 22 chr5 145173134 145173223 -54456927 + L1P3 LINE L1 1 89 -5786 2844 89 23 0 chr5 145173224 145173618 -54456532 + L1PA10 LINE L1 5761 6163 -5 391 306 68 0 chr5 145173726 145173991 -54456159 + L1ME LINE L1 3663 3945 -2201 666 321 85 35 chr5 145174025 145174427 -54455723 + L1ME LINE L1 4099 4520 -1626 270 264 49 14 chr5 145174517 145174661 -54455489 + L1ME LINE L1 5717 5865 -297 2164 137 0 3 chr5 145175112 145175426 -54454724 + AluSq SINE Alu 1 313 0 279 299 0 0 chr5 145176666 145176743 -54453407 + CT-rich Low_complexity Low_complexity 3 79 0 222 236 0 55 chr5 145178626 145178681 -54451469 - L2 LINE L2 -2 3270 3219 357 249 85 79 chr5 145178987 145179176 -54450974 - L2 LINE L2 0 3313 3124 462 162 43 34 chr5 145179176 145179293 -54450857 + MER53 DNA DNA 1 118 -71 * 640 112 26 26 chr5 145179292 145179408 -54450742 + MER53 DNA DNA 74 189 0 198 143 0 0 chr5 145179894 145179929 -54450221 + (CA)n Simple_repeat Simple_repeat 2 36 0 2381 68 0 47 chr5 145180850 145181171 -54448979 + AluY SINE Alu 1 306 -5 2197 39 0 0 chr5 145181171 145181426 -54448724 + AluY SINE Alu 42 296 -15 1668 150 23 39 chr5 145182132 145182439 -54447711 - AluJo SINE Alu -6 306 5 278 172 21 86 chr5 145183320 145183413 -54446737 - L1MC5 LINE L1 -64 7897 7811 904 242 75 40 chr5 145183495 145183946 -54446204 - L1MC5 LINE L1 -184 7777 7311 988 241 87 4 chr5 145183947 145184200 -54445950 - L2 LINE L2 -550 2764 2491 1858 222 19 153 chr5 145184737 145185454 -54444696 + L1MD1 LINE L1 3283 3900 -2246 538 170 21 0 chr5 145185454 145185548 -54444602 + FLAM_A SINE Alu 21 116 -26 1858 222 19 153 chr5 145185548 145185865 -54444285 + L1MD1 LINE L1 3900 4258 -1888 372 94 0 0 chr5 145185865 145185918 -54444232 + (GGA)n Simple_repeat Simple_repeat 2 54 0 270 231 77 10 chr5 145185972 145186076 -54444074 + L1MD1 LINE L1 4273 4383 -1763 999 171 0 36 chr5 145186078 145186271 -54443879 + AluJo SINE Alu 1 186 -126 2540 176 117 8 chr5 145186271 145186868 -54443282 + L1MD1 LINE L1 5380 6041 -201 15015 151 22 7 chr5 145186905 145193182 -54436968 + L1MA2 LINE L1 1347 7723 0 250 357 9 45 chr5 145193483 145193595 -54436555 - L3 LINE CR1 -79 1498 1391 851 275 31 21 chr5 145193675 145193966 -54436184 - MLT1I LTR MaLR 0 409 116 1607 153 21 38 chr5 145194027 145194314 -54435836 + AluJo SINE Alu 1 282 -30 2074 102 25 0 chr5 145195530 145195855 -54434295 - AluSx SINE Alu 0 332 1 1026 351 112 7 chr5 145198045 145198600 -54431550 - L3 LINE CR1 -16 1561 949 215 128 103 0 chr5 145198841 145198880 -54431270 - L2 LINE L2 0 3313 3271 202 328 35 19 chr5 145199300 145199413 -54430737 + MIR SINE MIR 2 117 -91 23 0 0 0 chr5 145199770 145199793 -54430357 + AT_rich Low_complexity Low_complexity 1 23 0 327 338 7 22 chr5 145200298 145200437 -54429713 + MIR SINE MIR 8 144 -118 594 258 38 6 chr5 145200468 145200627 -54429523 + MIR SINE MIR 77 240 -22 282 56 0 0 chr5 145200637 145200673 -54429477 + (CAT)n Simple_repeat Simple_repeat 3 38 0 237 244 0 0 chr5 145200696 145200741 -54429409 + L2 LINE L2 3211 3255 -17 556 204 0 0 chr5 145201017 145201120 -54429030 + U13 snRNA snRNA 1 103 -1 26 0 0 0 chr5 145202030 145202056 -54428094 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr5 145203122 145203151 -54426999 + AT_rich Low_complexity Low_complexity 1 29 0 3118 40 3 0 chr5 145205470 145205848 -54424302 - L1PA4 LINE L1 -7 6148 5770 41378 45 3 0 chr5 145205859 145211991 -54418159 - L1HS LINE L1 0 6155 7 1781 193 26 83 chr5 145212089 145212349 -54417801 + MER34B LTR ERV1 5 223 -342 2176 123 3 0 chr5 145212349 145212649 -54417501 + AluSp SINE Alu 1 301 -12 1781 193 26 83 chr5 145212649 145212896 -54417254 + MER34B LTR ERV1 223 483 -82 1509 212 77 31 chr5 145212896 145213311 -54416839 - MER57B LTR ERV1 0 434 1 452 169 37 75 chr5 145213313 145213482 -54416668 - MER57B-int LTR ERV1 -1 7536 6973 473 296 11 11 chr5 145213525 145213701 -54416449 - MER57B-int LTR ERV1 -568 6969 6794 1198 278 32 67 chr5 145215211 145216089 -54414061 - MER57B-int LTR ERV1 -1343 6194 2145 1433 211 4 91 chr5 145216098 145216595 -54413555 - MER57B-int LTR ERV1 -1775 5762 5309 326 289 39 39 chr5 145217383 145217539 -54412611 - MER57B-int LTR ERV1 -4479 3947 3792 315 333 74 21 chr5 145217837 145218026 -54412124 - MER57B-int LTR ERV1 -4062 2707 387 5855 186 25 27 chr5 145218058 145219452 -54410698 - L1M1 LINE L1 -4065 1263 16 280 139 0 165 chr5 145219584 145219620 -54410530 - MER57B-int LTR ERV1 -4387 3369 3351 2163 102 17 3 chr5 145219620 145219913 -54410237 - AluSq SINE Alu -16 297 1 280 139 0 165 chr5 145219913 145219955 -54410195 - MER57B-int LTR ERV1 -4405 3351 3304 592 297 18 12 chr5 145222034 145222298 -54407852 - MER57B-int LTR ERV1 -7239 298 3 1456 207 15 29 chr5 145222302 145222645 -54407505 - MER57B LTR ERV1 0 434 97 334 191 48 24 chr5 145222702 145222786 -54407364 + MER34C LTR ERV1 500 585 0 287 243 86 57 chr5 145223058 145223198 -54406952 + MER103 DNA DNA 22 165 -1 667 313 30 13 chr5 145224208 145224604 -54405546 - MARNA DNA Mariner -59 527 125 2712 77 3 18 chr5 145224899 145225290 -54404860 + L1PA8 LINE L1 5786 6170 -2 204 291 101 13 chr5 145225588 145225667 -54404483 + L2 LINE L2 3199 3284 -29 279 303 51 63 chr5 145225946 145226121 -54404029 + MLT1J LTR MaLR 4 176 -335 2314 161 56 5 chr5 145226421 145226851 -54403299 - LTR32 LTR ERVL -5 466 15 457 147 0 0 chr5 145226831 145226906 -54403244 - LTR32 LTR ERVL -383 88 14 * 201 232 18 36 chr5 145227778 145227834 -54402316 + MIR3 SINE MIR 103 157 -51 1142 258 60 54 chr5 145227837 145228322 -54401828 - LTR33A LTR ERVL -33 490 3 180 0 0 0 chr5 145229631 145229651 -54400499 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 322 309 15 37 chr5 145230705 145230841 -54399309 + MER5B DNA MER1_type 1 133 -45 376 267 17 87 chr5 145230898 145231070 -54399080 - L3 LINE CR1 -105 1472 1313 305 308 174 58 chr5 145231083 145231605 -54398545 + L3 LINE CR1 678 1260 -317 2136 143 98 15 chr5 145231946 145232345 -54397805 - MSTB1 LTR MaLR 0 432 1 451 299 37 50 chr5 145232562 145233020 -54397130 - L1M4 LINE L1 -1010 5136 4685 505 164 91 0 chr5 145233029 145233139 -54397011 + L1MB1 LINE L1 6049 6168 0 249 204 106 23 chr5 145233631 145233763 -54396387 - MSTB1 LTR MaLR -289 143 1 537 295 45 53 chr5 145233979 145234446 -54395704 - L1M4 LINE L1 -1010 5136 4671 542 154 91 0 chr5 145234446 145234556 -54395594 + L1MB1 LINE L1 6049 6168 0 537 295 45 53 chr5 145234556 145234814 -54395336 - L1M4 LINE L1 -1475 4671 4412 272 283 162 25 chr5 145235171 145235369 -54394781 + L3 LINE CR1 1344 1568 -9 342 193 9 37 chr5 145235899 145236008 -54394142 + (TATG)n Simple_repeat Simple_repeat 3 108 0 200 269 0 15 chr5 145236017 145236084 -54394066 + (TATATG)n Simple_repeat Simple_repeat 6 71 0 22 35 0 0 chr5 145437120 145437149 -54193001 + AT_rich Low_complexity Low_complexity 1 29 0 532 269 71 38 chr5 145437770 145437982 -54192168 + LTR33A LTR ERVL 213 431 -92 364 320 31 8 chr5 145438140 145438268 -54191882 + L2 LINE L2 3138 3268 -4 812 213 25 0 chr5 145439225 145439385 -54190765 + FRAM SINE Alu 1 156 -20 2691 51 0 0 chr5 145440802 145441113 -54189037 + AluY SINE Alu 1 311 0 7969 76 35 1 chr5 145441361 145442432 -54187718 - L1P3 LINE L1 -4734 1727 620 274 219 86 40 chr5 145442944 145443095 -54187055 + L1ME4a LINE L1 5963 6120 -1 400 298 19 6 chr5 145443156 145443314 -54186836 - MIR3 SINE MIR -11 197 38 276 290 150 43 chr5 145443753 145443960 -54186190 - L3 LINE CR1 -8 1569 1341 994 176 27 5 chr5 145444851 145445039 -54185111 - AluJb SINE Alu -120 192 1 1821 144 4 7 chr5 145445122 145445400 -54184750 + AluSx SINE Alu 5 281 -31 232 253 0 13 chr5 145445715 145445790 -54184360 + GA-rich Low_complexity Low_complexity 3 76 0 269 110 55 14 chr5 145445897 145445970 -54184180 + GA-rich Low_complexity Low_complexity 3 78 0 311 59 0 20 chr5 145445970 145446021 -54184129 + (CAGG)n Simple_repeat Simple_repeat 2 51 0 381 78 300 22 chr5 145446025 145446115 -54184035 + MER5A DNA MER1_type 75 189 0 462 259 13 63 chr5 145446294 145446452 -54183698 - MLT1J LTR MaLR -266 245 96 432 257 37 9 chr5 145446520 145446629 -54183521 - MLT1J LTR MaLR -399 112 1 * 699 159 60 7 chr5 145446629 145446774 -54183376 + MER33 DNA MER1_type 34 186 -138 2261 106 0 13 chr5 145447546 145447848 -54182302 + AluSq SINE Alu 1 298 -15 181 216 0 0 chr5 145449325 145449362 -54180788 - L2 LINE L2 -6 3307 3271 580 256 26 6 chr5 145449489 145449645 -54180505 - MIR SINE MIR -79 183 25 213 108 0 0 chr5 145453231 145453268 -54176882 + (G)n Simple_repeat Simple_repeat 1 37 0 198 0 0 0 chr5 145455002 145455024 -54175126 + (G)n Simple_repeat Simple_repeat 1 22 0 30 27 0 0 chr5 145455574 145455611 -54174539 + AT_rich Low_complexity Low_complexity 1 37 0 784 209 79 60 chr5 145455658 145455729 -54174421 - AluJb SINE Alu -92 220 152 2185 114 0 10 chr5 145455729 145456028 -54174122 - AluSg SINE Alu -14 296 1 784 209 79 60 chr5 145456028 145456171 -54173979 - AluJb SINE Alu -160 152 2 1384 158 108 18 chr5 145456227 145456506 -54173644 - AluJb SINE Alu -8 304 1 38 0 0 0 chr5 145457032 145457070 -54173080 + AT_rich Low_complexity Low_complexity 1 38 0 2282 107 0 3 chr5 145457482 145457782 -54172368 - AluSx SINE Alu -13 299 1 935 104 0 15 chr5 145457787 145457921 -54172229 - AluSc SINE Alu -7 302 171 2251 100 3 0 chr5 145457972 145458263 -54171887 + AluSx SINE Alu 5 296 -16 2428 99 0 6 chr5 145458266 145458580 -54171570 + AluSq SINE Alu 1 312 -1 318 26 0 0 chr5 145458589 145458628 -54171522 + (TG)n Simple_repeat Simple_repeat 2 40 0 2465 73 3 3 chr5 145459108 145459408 -54170742 + AluSp SINE Alu 1 300 -13 1790 134 28 32 chr5 145459712 145460015 -54170135 - AluJb SINE Alu 0 302 1 2358 80 7 0 chr5 145460178 145460467 -54169683 - AluSg SINE Alu -19 291 1 1189 153 13 44 chr5 145460651 145460879 -54169271 - AluJo SINE Alu -6 306 86 219 277 160 0 chr5 145460985 145461079 -54169071 - MIR SINE MIR -62 146 38 2160 114 10 0 chr5 145461172 145461470 -54168680 + AluSq SINE Alu 1 301 -12 2256 121 0 0 chr5 145461580 145461886 -54168264 + AluSx SINE Alu 1 306 -6 1421 162 109 37 chr5 145462146 145462237 -54167913 - MER2 DNA MER2_type 0 344 261 1741 147 34 20 chr5 145462237 145462529 -54167621 + AluJo SINE Alu 1 296 -16 1421 162 109 37 chr5 145462529 145462758 -54167392 - MER2 DNA MER2_type -83 261 1 2302 79 0 16 chr5 145462851 145463154 -54166996 + AluSx SINE Alu 1 298 -14 2344 100 0 7 chr5 145463386 145463686 -54166464 - AluSx SINE Alu -14 298 1 563 276 78 47 chr5 145464209 145464596 -54165554 - L1MC5 LINE L1 -54 7907 7509 227 351 104 7 chr5 145465559 145465713 -54164437 - MIR3 SINE MIR -5 203 35 912 195 45 60 chr5 145465738 145465817 -54164333 + L1MB4 LINE L1 4773 4852 -1294 2079 128 0 0 chr5 145465817 145466129 -54164021 - AluSx SINE Alu 0 312 1 912 195 45 60 chr5 145466129 145466315 -54163835 + L1MB4 LINE L1 4852 5035 -1111 2174 187 11 55 chr5 145466338 145466631 -54163519 + L1MB4 LINE L1 5507 5768 -412 2380 73 0 13 chr5 145466631 145466931 -54163219 + AluSc SINE Alu 1 296 -13 2174 187 11 55 chr5 145466931 145467162 -54162988 + L1MB4 LINE L1 5768 6008 -172 1172 67 0 0 chr5 145467581 145467716 -54162434 + AluSp SINE Alu 1 135 -178 2170 105 0 29 chr5 145467716 145468030 -54162120 + AluSp SINE Alu 1 305 -8 2467 81 3 0 chr5 145470238 145470548 -54159602 - AluY SINE Alu 0 311 1 1188 185 9 18 chr5 145470788 145471010 -54159140 - AluJo SINE Alu -92 220 1 1858 170 3 0 chr5 145471058 145471362 -54158788 + AluJb SINE Alu 1 305 0 1395 140 136 4 chr5 145471653 145471925 -54158225 - MER44D DNA MER2_type -2 607 30 1343 187 216 39 chr5 145471957 145472049 -54158101 + MLT1F LTR MaLR 4 78 -464 1369 181 62 40 chr5 145472049 145472355 -54157795 + AluJb SINE Alu 1 312 0 1343 187 216 39 chr5 145472355 145472713 -54157437 + MLT1F LTR MaLR 78 534 -8 2298 95 0 10 chr5 145472731 145473026 -54157124 + AluSc SINE Alu 1 292 -17 2373 101 0 0 chr5 145473036 145473334 -54156816 + AluSx SINE Alu 1 298 -14 2284 74 11 0 chr5 145473624 145473908 -54156242 + AluSp SINE Alu 16 302 -11 1768 134 20 49 chr5 145473967 145474273 -54155877 + AluJb SINE Alu 11 307 -5 345 34 51 0 chr5 145474273 145474332 -54155818 + (TA)n Simple_repeat Simple_repeat 2 63 0 30 45 0 0 chr5 145474337 145474381 -54155769 + AT_rich Low_complexity Low_complexity 1 44 0 189 374 48 7 chr5 145474444 145474591 -54155559 + MIR3 SINE MIR 21 173 -35 2133 123 10 0 chr5 145474610 145474910 -54155240 - AluSx SINE Alu -9 303 1 620 270 123 50 chr5 145474967 145475349 -54154801 + L2 LINE L2 2162 2571 -743 488 258 14 14 chr5 145475631 145475776 -54154374 - L1ME1 LINE L1 0 6334 6035 2441 76 7 0 chr5 145475871 145476173 -54153977 + AluSp SINE Alu 1 304 -9 559 178 51 8 chr5 145476244 145476362 -54153788 + MER5B DNA MER1_type 6 128 -50 1483 121 52 117 chr5 145476373 145476680 -54153470 - AluJo SINE Alu -25 287 1 688 107 71 9 chr5 145476924 145477036 -54153114 - FLAM_C SINE Alu -18 125 7 487 254 8 0 chr5 145478390 145478524 -54151626 - L1ME2 LINE L1 -10 6154 6020 258 370 36 50 chr5 145478660 145478941 -54151209 + L2 LINE L2 2579 2855 -459 2440 59 7 3 chr5 145479389 145479694 -54150456 - AluY SINE Alu -5 306 1 1908 157 3 0 chr5 145479696 145479990 -54150160 - AluJb SINE Alu -17 295 1 1738 259 128 41 chr5 145480160 145480639 -54149511 + L2 LINE L2 2166 2602 -711 1350 161 6 141 chr5 145480639 145480791 -54149359 + AluJo SINE Alu 1 172 -140 1288 206 6 59 chr5 145480791 145481112 -54149038 + AluJo SINE Alu 5 308 -4 1948 152 3 16 chr5 145481112 145481427 -54148723 + AluSq SINE Alu 1 311 -2 1350 161 6 141 chr5 145481427 145481440 -54148710 + AluJo SINE Alu 171 184 -128 2335 88 0 10 chr5 145481440 145481736 -54148414 + AluY SINE Alu 1 293 -18 1350 161 6 141 chr5 145481736 145481915 -54148235 + AluJo SINE Alu 184 300 -12 1738 259 128 41 chr5 145481915 145482228 -54147922 + L2 LINE L2 2602 3030 -283 297 202 0 128 chr5 145482246 145482355 -54147795 + L2 LINE L2 3146 3240 -73 1998 147 0 7 chr5 145482941 145483248 -54146902 - AluSx SINE Alu -7 305 1 483 194 0 0 chr5 145483467 145483575 -54146575 + CT-rich Low_complexity Low_complexity 3 110 0 1432 121 0 10 chr5 145483722 145483929 -54146221 - AluSg/x SINE Alu -2 308 104 2141 117 0 29 chr5 145483929 145484237 -54145913 + AluSg SINE Alu 1 299 -11 253 250 0 0 chr5 145484315 145484363 -54145787 - AluJ/monomer SINE Alu -254 48 1 402 325 41 25 chr5 145484615 145484812 -54145338 - MIR3 SINE MIR -6 202 3 2308 95 14 0 chr5 145484941 145485237 -54144913 + AluSp SINE Alu 1 300 -13 1090 164 0 6 chr5 145485237 145485408 -54144742 + AluSg/x SINE Alu 132 301 -9 1464 181 24 31 chr5 145486013 145486306 -54143844 - AluJo SINE Alu -21 291 1 2323 96 3 0 chr5 145486334 145486637 -54143513 + AluSp SINE Alu 1 304 -9 336 298 72 69 chr5 145486722 145486775 -54143375 + L1M4 LINE L1 4837 4888 -1258 2221 103 0 10 chr5 145486775 145487075 -54143075 - AluY SINE Alu -14 297 1 336 298 72 69 chr5 145487075 145487370 -54142780 + L1M4 LINE L1 4888 5186 -960 276 176 0 0 chr5 145487387 145487438 -54142712 + L1M4 LINE L1 3796 3846 -2300 2257 95 3 0 chr5 145487446 145487730 -54142420 + AluSg SINE Alu 3 287 -23 2059 127 0 48 chr5 145487993 145488194 -54141956 - AluSc SINE Alu -8 301 119 2379 88 0 19 chr5 145488194 145488512 -54141638 - AluSq SINE Alu -1 312 1 2059 127 0 48 chr5 145488512 145488626 -54141524 - AluSc SINE Alu -190 119 1 817 178 0 15 chr5 145488727 145488862 -54141288 - FLAM_C SINE Alu -10 133 1 1603 184 0 26 chr5 145488865 145489175 -54140975 - AluJo SINE Alu -6 306 5 2166 116 0 16 chr5 145489195 145489498 -54140652 + AluSx SINE Alu 1 298 -14 669 62 18 18 chr5 145489690 145489803 -54140347 + (TTTC)n Simple_repeat Simple_repeat 4 116 0 1817 118 67 0 chr5 145489803 145490058 -54140092 - AluSg SINE Alu -38 272 1 612 107 0 0 chr5 145490077 145490161 -54139989 + AluSc SINE Alu 2 85 -224 1981 116 4 11 chr5 145490170 145490445 -54139705 + AluSc SINE Alu 26 298 -11 1678 97 5 0 chr5 145490445 145490661 -54139489 + AluSg/x SINE Alu 81 297 -15 2266 63 31 11 chr5 145490662 145490948 -54139202 + AluY SINE Alu 2 293 -18 1796 150 13 7 chr5 145491201 145491501 -54138649 - AluSx SINE Alu -10 302 1 1976 144 17 0 chr5 145491530 145491829 -54138321 + AluSx SINE Alu 1 304 -8 2480 70 7 0 chr5 145492148 145492450 -54137700 - AluSp SINE Alu -9 304 1 2165 104 10 3 chr5 145492538 145492836 -54137314 - AluSx SINE Alu -12 300 1 2387 62 13 10 chr5 145492847 145493151 -54136999 - AluY SINE Alu -6 305 1 378 208 58 25 chr5 145493728 145493760 -54136390 - MER5C DNA MER1_type -200 124 95 2287 112 0 10 chr5 145493760 145494065 -54136085 - AluSx SINE Alu -10 302 1 378 208 58 25 chr5 145494065 145494152 -54135998 - MER5C DNA MER1_type -229 95 1 2106 113 3 0 chr5 145494436 145494720 -54135430 - AluSg SINE Alu -24 286 2 899 102 0 0 chr5 145494726 145494844 -54135306 - AluSg/x SINE Alu -19 291 174 595 200 0 0 chr5 145495149 145495259 -54134891 + FLAM_A SINE Alu 28 137 -5 2150 104 14 3 chr5 145495269 145495556 -54134594 + AluSc SINE Alu 1 290 -19 523 250 128 0 chr5 145495913 145496069 -54134081 + MIR SINE MIR 41 216 -46 991 156 108 0 chr5 145496100 145496286 -54133864 + MER2 DNA MER2_type 1 206 -139 1246 84 0 0 chr5 145496356 145496510 -54133640 - AluSg/x SINE Alu -25 285 132 401 149 0 45 chr5 145496515 145496582 -54133568 + MER2 DNA MER2_type 280 343 -2 2001 79 32 82 chr5 145497399 145497714 -54132436 + AluSc SINE Alu 1 299 -10 189 0 0 0 chr5 145498085 145498106 -54132044 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 1765 136 10 65 chr5 145498114 145498424 -54131726 + AluJo SINE Alu 1 293 -19 2296 71 0 55 chr5 145499991 145500317 -54129833 + AluSg SINE Alu 1 308 -2 424 78 0 0 chr5 145500706 145500770 -54129380 + Alu SINE Alu 249 312 0 2373 79 6 29 chr5 145500777 145501093 -54129057 + AluSx SINE Alu 1 309 -3 1860 152 0 7 chr5 145501104 145501394 -54128756 + AluJb SINE Alu 1 288 -24 675 144 8 8 chr5 145501449 145501567 -54128583 - ORSL DNA AcHobo -157 118 1 21 36 0 0 chr5 145501769 145501797 -54128353 + AT_rich Low_complexity Low_complexity 1 28 0 533 248 143 34 chr5 145502262 145502369 -54127781 + AluJo SINE Alu 40 134 -178 2270 114 3 0 chr5 145502369 145502667 -54127483 + AluSx SINE Alu 1 299 -13 956 131 0 0 chr5 145502671 145502801 -54127349 + FLAM_C SINE Alu 3 132 -1 533 248 143 34 chr5 145502801 145502926 -54127224 + AluJo SINE Alu 136 303 -9 1481 157 33 65 chr5 145503013 145503175 -54126975 - AluJo SINE Alu -16 296 147 2550 50 0 7 chr5 145503175 145503472 -54126678 - AluY SINE Alu -16 295 1 1481 157 33 65 chr5 145503472 145503615 -54126535 - AluJo SINE Alu -165 147 1 2105 82 0 7 chr5 145503852 145504122 -54126028 - AluSx SINE Alu -44 268 1 1152 123 0 0 chr5 145504161 145504323 -54125827 + AluSg/x SINE Alu 135 296 -14 1751 164 20 7 chr5 145504493 145504653 -54125497 - AluJb SINE Alu -15 297 141 185 0 40 0 chr5 145504653 145504678 -54125472 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 2037 127 0 7 chr5 145504678 145504961 -54125189 - AluY SINE Alu -30 281 1 1751 164 20 7 chr5 145504961 145505092 -54125058 - AluJb SINE Alu -170 142 1 507 232 27 116 chr5 145505602 145505930 -54124220 + AluYa5 SINE Alu 2 300 -11 191 241 56 0 chr5 145506231 145506285 -54123865 - L2 LINE L2 -1 3312 3256 2345 96 3 3 chr5 145506982 145507284 -54122866 - AluSg SINE Alu -8 302 1 2442 73 3 0 chr5 145508355 145508666 -54121484 + AluSp SINE Alu 1 312 0 611 157 0 0 chr5 145508702 145508791 -54121359 + AluSq/x SINE Alu 44 132 -181 1359 74 6 0 chr5 145508791 145508954 -54121196 - AluSp SINE Alu -149 164 1 886 185 0 0 chr5 145509218 145509364 -54120786 - FRAM SINE Alu -30 146 1 2212 86 0 4 chr5 145509368 145509646 -54120504 - AluSg SINE Alu -11 299 23 2304 106 0 0 chr5 145509670 145509963 -54120187 - AluSx SINE Alu -17 295 3 2296 91 10 3 chr5 145509965 145510261 -54119889 - AluSq SINE Alu -15 298 1 658 195 0 0 chr5 145510276 145510399 -54119751 - AluJb SINE Alu -189 123 1 912 195 45 60 chr5 145511831 145511910 -54118240 + L1MB4 LINE L1 4773 4852 -1294 2079 128 0 0 chr5 145511910 145512222 -54117928 - AluSx SINE Alu 0 312 1 912 195 45 60 chr5 145512222 145512408 -54117742 + L1MB4 LINE L1 4852 5035 -1111 2711 151 11 48 chr5 145512431 145512723 -54117427 + L1MB4 LINE L1 5507 5773 -407 2380 73 0 13 chr5 145512723 145513023 -54117127 + AluSc SINE Alu 1 296 -13 2711 151 11 48 chr5 145513023 145513253 -54116897 + L1MB4 LINE L1 5773 6010 -170 2222 116 0 3 chr5 145513268 145513562 -54116588 - AluSq SINE Alu -20 293 1 1614 205 10 3 chr5 145513569 145513857 -54116293 - AluJo SINE Alu -22 290 1 1941 132 0 63 chr5 145514065 145514398 -54115752 - AluSx SINE Alu 0 312 1 2307 87 10 10 chr5 145514410 145514709 -54115441 - AluSg1 SINE Alu -10 299 1 2068 74 63 18 chr5 145514742 145515027 -54115123 - AluSg SINE Alu -12 298 1 1697 183 43 3 chr5 145515289 145515589 -54114561 - AluJb SINE Alu 0 312 1 2414 103 0 6 chr5 145517486 145517620 -54112530 + AluSp SINE Alu 1 134 -179 2296 41 45 31 chr5 145517620 145517912 -54112238 + AluY SINE Alu 1 296 -15 2414 103 0 6 chr5 145517912 145518089 -54112061 + AluSp SINE Alu 134 310 -3 379 250 97 110 chr5 145518229 145518330 -54111820 + MIR SINE MIR 33 134 -128 1490 163 48 12 chr5 145518330 145518581 -54111569 + AluJo SINE Alu 1 260 -52 207 0 0 0 chr5 145518582 145518605 -54111545 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2165 114 29 10 chr5 145518612 145518747 -54111403 + AluSx SINE Alu 1 132 -180 2348 93 20 0 chr5 145518747 145519047 -54111103 + AluSg SINE Alu 1 306 -4 2165 114 29 10 chr5 145519047 145519217 -54110933 + AluSx SINE Alu 132 312 0 2266 108 0 13 chr5 145519227 145519542 -54110608 + AluSp SINE Alu 1 311 -2 379 250 97 110 chr5 145519542 145519647 -54110503 + MIR SINE MIR 149 257 -5 2463 59 0 0 chr5 145519753 145520040 -54110110 - AluY SINE Alu -24 287 1 816 141 39 16 chr5 145520041 145520169 -54109981 - AluJo/FLAM SINE Alu -170 132 2 1521 188 0 62 chr5 145520699 145521007 -54109143 + AluJo SINE Alu 1 289 -23 324 145 133 0 chr5 145521468 145521551 -54108599 + L1MB7 LINE L1 6091 6184 0 1660 165 37 17 chr5 145521564 145521861 -54108289 + AluJb SINE Alu 1 303 -9 2228 123 0 3 chr5 145521873 145522175 -54107975 - AluSx SINE Alu -11 301 1 1813 152 10 17 chr5 145522182 145522472 -54107678 - AluJb SINE Alu -24 288 1 368 132 115 40 chr5 145522494 145522536 -54107614 - L1MB3 LINE L1 0 6183 6146 2501 66 0 10 chr5 145522536 145522841 -54107309 - AluY SINE Alu -9 302 1 368 132 115 40 chr5 145522841 145522912 -54107238 - L1MB3 LINE L1 -37 6146 6055 2255 122 0 3 chr5 145522939 145523243 -54106907 - AluSx SINE Alu -9 303 1 23 0 0 0 chr5 145523343 145523366 -54106784 + AT_rich Low_complexity Low_complexity 1 23 0 1987 149 10 3 chr5 145523451 145523759 -54106391 - AluJo SINE Alu 0 312 3 21 71 0 0 chr5 145523910 145523952 -54106198 + AT_rich Low_complexity Low_complexity 1 42 0 2349 98 0 0 chr5 145523952 145524258 -54105892 - AluY SINE Alu -3 308 3 1021 101 0 0 chr5 145524260 145524389 -54105761 - AluSq/x SINE Alu -183 129 1 23 0 0 0 chr5 145524392 145524415 -54105735 + AT_rich Low_complexity Low_complexity 1 23 0 808 104 0 0 chr5 145524415 145524521 -54105629 - U6 snRNA snRNA -1 106 1 2251 96 0 3 chr5 145524756 145525047 -54105103 - AluSg SINE Alu -16 294 5 764 198 0 0 chr5 145525429 145525555 -54104595 - FLAM_A SINE Alu -7 126 1 536 287 36 64 chr5 145525950 145525989 -54104161 - L1ME LINE L1 -361 5809 5770 2290 111 0 0 chr5 145525989 145526306 -54103844 - AluSx SINE Alu 0 312 1 536 287 36 64 chr5 145526306 145526509 -54103641 - L1ME LINE L1 -400 5770 5574 2251 103 10 10 chr5 145526509 145526809 -54103341 - AluSx SINE Alu -12 300 1 536 287 36 64 chr5 145526809 145526932 -54103218 - L1ME LINE L1 -596 5574 5449 297 0 0 0 chr5 145527294 145527327 -54102823 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 2092 118 0 0 chr5 145527330 145527609 -54102541 - AluSc SINE Alu -30 279 1 1670 177 24 10 chr5 145527766 145528060 -54102090 + AluJo SINE Alu 1 298 -14 730 173 0 53 chr5 145528091 145528224 -54101926 - AluSq/x SINE Alu -186 127 2 216 86 0 0 chr5 145528296 145528331 -54101819 + (TA)n Simple_repeat Simple_repeat 1 35 0 737 200 0 0 chr5 145528351 145528481 -54101669 - FLAM_A SINE Alu -3 130 1 987 192 12 37 chr5 145528859 145529104 -54101046 - L1MB8 LINE L1 -2 6176 5938 2380 97 3 0 chr5 145529129 145529428 -54100722 - AluSp SINE Alu -13 300 1 1609 152 6 91 chr5 145529739 145529912 -54100238 - AluJo SINE Alu -11 301 115 210 71 0 0 chr5 145529912 145529940 -54100210 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 2144 102 3 7 chr5 145529946 145530230 -54099920 - AluSc SINE Alu -26 283 1 1609 152 6 91 chr5 145530230 145530378 -54099772 - AluJo SINE Alu -202 110 1 2519 71 0 0 chr5 145530560 145530870 -54099280 - AluY SINE Alu -1 310 1 1244 152 42 0 chr5 145531154 145531184 -54098966 + AluSg/x SINE Alu 90 117 -193 219 88 0 0 chr5 145531184 145531218 -54098932 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1244 152 42 0 chr5 145531218 145531378 -54098772 + AluSg/x SINE Alu 117 288 -22 236 130 43 0 chr5 145531382 145531428 -54098722 + HsTC2 DNA Tc2 1734 1781 -117 732 167 33 0 chr5 145531430 145531550 -54098600 + FLAM_C SINE Alu 2 125 -18 25 0 0 0 chr5 145531554 145531579 -54098571 + AT_rich Low_complexity Low_complexity 1 25 0 335 154 141 0 chr5 145531622 145531700 -54098450 + HsTC2 DNA Tc2 1789 1877 -21 379 244 25 34 chr5 145531700 145531819 -54098331 - MIR SINE MIR -137 125 8 1777 168 3 19 chr5 145532165 145532474 -54097676 + AluJb SINE Alu 1 304 -8 811 149 21 18 chr5 145532754 145533032 -54097118 + L1MA7 LINE L1 5894 6278 -13 225 0 0 0 chr5 145533078 145533103 -54097047 + (TTTTA)n Simple_repeat Simple_repeat 4 28 0 2201 118 3 0 chr5 145533143 145533432 -54096718 - AluSx SINE Alu -14 298 9 1930 135 0 64 chr5 145533448 145533774 -54096376 - AluSx SINE Alu -7 305 1 2196 118 0 13 chr5 145534095 145534409 -54095741 + AluSx SINE Alu 1 310 -2 639 224 8 8 chr5 145534424 145534549 -54095601 + FLAM_C SINE Alu 2 126 -17 21 0 0 0 chr5 145534549 145534570 -54095580 + AT_rich Low_complexity Low_complexity 1 21 0 823 155 0 31 chr5 145534637 145534766 -54095384 + FLAM_C SINE Alu 1 125 -18 1645 82 140 50 chr5 145534805 145534998 -54095152 - AluSx SINE Alu -8 304 77 2596 41 0 0 chr5 145534998 145535288 -54094862 - AluY SINE Alu -21 290 1 1645 82 140 50 chr5 145535288 145535373 -54094777 - AluSx SINE Alu -235 77 1 2218 114 0 3 chr5 145535493 145535791 -54094359 - AluSg SINE Alu -13 297 1 2100 114 3 3 chr5 145535868 145536157 -54093993 - AluY SINE Alu -20 291 3 2760 33 0 0 chr5 145536168 145536472 -54093678 - AluY SINE Alu -7 304 1 657 244 55 79 chr5 145536505 145536833 -54093317 + L2 LINE L2 2994 3313 0 2164 86 0 43 chr5 145536990 145537293 -54092857 + AluSg SINE Alu 1 290 -20 2150 131 0 19 chr5 145537536 145537856 -54092294 + MER1B DNA MER1_type 13 326 -13 25 0 0 0 chr5 145538507 145538532 -54091618 + AT_rich Low_complexity Low_complexity 1 25 0 750 94 0 0 chr5 145538725 145538821 -54091329 + U6 snRNA snRNA 2 97 -10 2077 87 3 7 chr5 145538824 145539110 -54091040 + L1PA8 LINE L1 5888 6172 0 21 0 0 0 chr5 145539120 145539141 -54091009 + AT_rich Low_complexity Low_complexity 1 21 0 2143 114 0 29 chr5 145539421 145539727 -54090423 + AluSg1 SINE Alu 1 297 -12 2233 115 3 10 chr5 145539757 145540061 -54090089 + AluSx SINE Alu 1 302 -10 2141 124 3 0 chr5 145540114 145540412 -54089738 - AluSp SINE Alu -7 306 8 2349 102 0 10 chr5 145540462 145540776 -54089374 + AluSq SINE Alu 1 311 -2 2239 86 14 0 chr5 145540877 145541178 -54088972 + AluSp SINE Alu 1 305 0 398 221 84 11 chr5 145541535 145541630 -54088520 + Tigger3b DNA MER2_type 1 102 -1129 * 4748 124 112 17 chr5 145541624 145541930 -54088220 + Tigger3b DNA MER2_type 269 545 -2483 2207 104 19 16 chr5 145541930 145542239 -54087911 + AluSx SINE Alu 1 310 -2 4748 124 112 17 chr5 145542239 145542342 -54087808 + Tigger3b DNA MER2_type 545 637 -2391 1740 197 0 0 chr5 145542342 145542647 -54087503 + AluSx SINE Alu 3 307 -5 1670 188 14 0 chr5 145542650 145542938 -54087212 + AluJo SINE Alu 1 292 -20 2322 93 3 7 chr5 145542944 145543246 -54086904 + AluSp SINE Alu 1 301 -12 4748 124 112 17 chr5 145543246 145543694 -54086456 + Tigger3b DNA MER2_type 642 1220 -11 2228 126 3 0 chr5 145543861 145544171 -54085979 + AluSx SINE Alu 1 311 -1 2323 98 3 0 chr5 145544525 145544822 -54085328 + AluSc SINE Alu 2 299 -10 1620 210 0 0 chr5 145544831 145545131 -54085019 + AluJb SINE Alu 2 301 -11 559 228 87 0 chr5 145545323 145545450 -54084700 + MER58A DNA MER1_type 2 139 0 906 70 0 9 chr5 145545451 145545566 -54084584 + AluSp SINE Alu 3 116 -197 1773 69 4 101 chr5 145545570 145545846 -54084304 + AluSp SINE Alu 48 296 -17 520 181 53 0 chr5 145545846 145545940 -54084210 + MER58A DNA MER1_type 126 224 0 291 278 152 53 chr5 145545958 145546109 -54084041 + MER5A DNA MER1_type 12 177 -12 1699 161 7 20 chr5 145546112 145546404 -54083746 + AluJb SINE Alu 1 288 -24 1852 148 23 16 chr5 145546424 145546734 -54083416 + AluJb SINE Alu 1 312 0 3322 150 72 40 chr5 145547071 145547548 -54082602 - L1MA7 LINE L1 0 6291 5786 2503 68 3 0 chr5 145547548 145547843 -54082307 + AluSp SINE Alu 2 297 -16 3322 150 72 40 chr5 145547843 145548017 -54082133 - L1MA7 LINE L1 -505 5786 5619 658 195 0 0 chr5 145551181 145551304 -54078846 + AluJb SINE Alu 1 123 -189 2296 91 10 3 chr5 145551319 145551615 -54078535 + AluSq SINE Alu 1 298 -15 2304 106 0 0 chr5 145551617 145551910 -54078240 + AluSx SINE Alu 3 295 -17 2212 86 0 4 chr5 145551934 145552212 -54077938 + AluSg SINE Alu 23 299 -11 886 185 0 0 chr5 145552216 145552362 -54077788 + FRAM SINE Alu 1 146 -30 1344 80 6 0 chr5 145552626 145552789 -54077361 + AluSp SINE Alu 1 164 -149 611 157 0 0 chr5 145552789 145552878 -54077272 - AluSq/x SINE Alu -181 132 44 180 0 0 0 chr5 145552914 145552934 -54077216 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2441 73 3 0 chr5 145552936 145553225 -54076925 - AluSp SINE Alu -23 290 1 232 262 107 0 chr5 145553240 145553324 -54076826 - L1MEd LINE L1 -4862 1257 1165 2353 96 3 3 chr5 145554299 145554602 -54075548 + AluSg SINE Alu 1 303 -7 191 241 56 0 chr5 145555299 145555353 -54074797 + L2 LINE L2 3256 3312 -1 1569 198 27 0 chr5 145555654 145555947 -54074203 - AluJb SINE Alu -11 301 1 1751 164 20 7 chr5 145556456 145556587 -54073563 + AluJb SINE Alu 1 129 -183 2038 127 0 7 chr5 145556587 145556895 -54073255 + AluY SINE Alu 1 306 0 1751 164 20 7 chr5 145556895 145557055 -54073095 + AluJb SINE Alu 129 297 -15 1152 123 0 0 chr5 145557225 145557387 -54072763 - AluSg/x SINE Alu -14 298 137 2105 82 0 7 chr5 145557426 145557696 -54072454 + AluSx SINE Alu 1 268 -44 1481 157 33 65 chr5 145557933 145558076 -54072074 + AluJo SINE Alu 1 147 -165 2550 50 0 7 chr5 145558076 145558373 -54071777 + AluY SINE Alu 1 295 -16 1481 157 33 65 chr5 145558373 145558535 -54071615 + AluJo SINE Alu 147 296 -16 533 248 143 34 chr5 145558622 145558747 -54071403 - AluJo SINE Alu -9 303 193 956 131 0 0 chr5 145558747 145558877 -54071273 - AluJo/FLAM SINE Alu -170 132 3 2270 114 3 0 chr5 145558881 145559179 -54070971 - AluSx SINE Alu -13 299 1 533 248 143 34 chr5 145559179 145559286 -54070864 - AluJo SINE Alu -121 191 40 21 36 0 0 chr5 145559751 145559779 -54070371 + AT_rich Low_complexity Low_complexity 1 28 0 675 144 8 8 chr5 145559981 145560099 -54070051 + ORSL DNA AcHobo 1 118 -157 1860 152 0 7 chr5 145560154 145560444 -54069706 - AluJb SINE Alu -24 288 1 2373 79 6 29 chr5 145560455 145560771 -54069379 - AluSx SINE Alu -3 309 1 424 78 0 0 chr5 145560778 145560842 -54069308 - Alu SINE Alu 0 309 246 2296 71 0 55 chr5 145561231 145561557 -54068593 - AluSg SINE Alu -2 308 1 1765 136 10 65 chr5 145563124 145563434 -54066716 - AluJo SINE Alu -19 293 1 189 0 0 0 chr5 145563442 145563463 -54066687 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 2014 76 32 82 chr5 145563834 145564149 -54066001 - AluSc SINE Alu -10 299 1 401 149 0 45 chr5 145564966 145565033 -54065117 - MER2 DNA MER2_type -2 343 280 1246 84 0 0 chr5 145565038 145565192 -54064958 + AluSg/x SINE Alu 132 285 -25 991 156 108 0 chr5 145565262 145565448 -54064702 - MER2 DNA MER2_type -139 206 1 523 250 128 0 chr5 145565479 145565635 -54064515 - MIR SINE MIR -46 216 41 2150 104 14 3 chr5 145565992 145566279 -54063871 - AluSc SINE Alu -19 290 1 595 200 0 0 chr5 145566289 145566399 -54063751 - FLAM_A SINE Alu -5 137 28 899 102 0 0 chr5 145566704 145566822 -54063328 + AluSg/x SINE Alu 174 291 -19 2106 113 3 0 chr5 145566828 145567112 -54063038 + AluSg SINE Alu 2 286 -24 378 208 58 25 chr5 145567396 145567483 -54062667 + MER5C DNA MER1_type 1 95 -229 2287 112 0 10 chr5 145567483 145567788 -54062362 + AluSx SINE Alu 1 302 -10 378 208 58 25 chr5 145567788 145567820 -54062330 + MER5C DNA MER1_type 95 124 -200 2387 62 13 10 chr5 145568397 145568701 -54061449 + AluY SINE Alu 1 305 -6 2165 104 10 3 chr5 145568712 145569010 -54061140 + AluSx SINE Alu 1 300 -12 2489 69 7 0 chr5 145569098 145569401 -54060749 + AluSp SINE Alu 1 305 -8 1976 144 17 0 chr5 145569720 145570019 -54060131 - AluSx SINE Alu -8 304 1 1796 150 13 7 chr5 145570048 145570348 -54059802 + AluSx SINE Alu 1 302 -10 2266 63 31 11 chr5 145570601 145570887 -54059263 - AluY SINE Alu -18 293 2 1678 97 5 0 chr5 145570888 145571104 -54059046 - AluSg/x SINE Alu -15 295 79 1981 116 4 11 chr5 145571104 145571379 -54058771 - AluSc SINE Alu -11 298 26 614 106 0 0 chr5 145571388 145571473 -54058677 - AluSc SINE Alu -224 85 1 2068 116 32 0 chr5 145571507 145571792 -54058358 + AluSx SINE Alu 1 294 -18 1411 224 78 30 chr5 145571840 145572313 -54057837 - L1ME2 LINE L1 -32 6132 5637 2320 98 0 7 chr5 145572314 145572610 -54057540 - AluSg SINE Alu -16 294 1 25 0 0 0 chr5 145572619 145572644 -54057506 + AT_rich Low_complexity Low_complexity 1 25 0 1537 184 49 3 chr5 145572959 145573247 -54056903 - AluJo SINE Alu -11 301 1 2421 89 0 0 chr5 145573500 145573793 -54056357 + AluSg SINE Alu 1 293 -17 2448 77 0 3 chr5 145574927 145575224 -54054926 - AluSp SINE Alu -17 296 1 1630 160 52 24 chr5 145575635 145575922 -54054228 - AluJb SINE Alu -17 295 1 2358 94 3 19 chr5 145576125 145576443 -54053707 - AluSp SINE Alu 0 313 1 1589 143 50 29 chr5 145576445 145576724 -54053426 - AluSx SINE Alu -12 300 16 2600 54 0 0 chr5 145576724 145577018 -54053132 + AluY SINE Alu 1 295 -16 962 193 0 0 chr5 145577046 145577207 -54052943 - AluJb SINE Alu -18 294 134 1988 105 16 36 chr5 145577207 145577513 -54052637 - AluSx SINE Alu -12 300 1 2259 89 0 54 chr5 145577597 145577912 -54052238 + AluSx SINE Alu 1 298 -14 2284 74 11 0 chr5 145578202 145578486 -54051664 + AluSp SINE Alu 16 302 -11 1785 133 19 49 chr5 145578545 145578853 -54051297 + AluJb SINE Alu 11 309 -3 327 35 53 0 chr5 145578853 145578910 -54051240 + (TA)n Simple_repeat Simple_repeat 2 61 0 30 45 0 0 chr5 145578915 145578959 -54051191 + AT_rich Low_complexity Low_complexity 1 44 0 189 374 48 7 chr5 145579022 145579169 -54050981 + MIR3 SINE MIR 21 173 -35 2133 123 10 0 chr5 145579188 145579488 -54050662 - AluSx SINE Alu -9 303 1 620 270 123 50 chr5 145579545 145579927 -54050223 + L2 LINE L2 2162 2571 -743 488 258 14 14 chr5 145580209 145580354 -54049796 - L1ME1 LINE L1 0 6334 6035 2441 76 7 0 chr5 145580449 145580751 -54049399 + AluSp SINE Alu 1 304 -9 559 178 51 8 chr5 145580822 145580940 -54049210 + MER5B DNA MER1_type 6 128 -50 1483 121 52 117 chr5 145580951 145581258 -54048892 - AluJo SINE Alu -25 287 1 718 108 72 0 chr5 145581502 145581613 -54048537 - FLAM_C SINE Alu -18 125 7 487 254 8 0 chr5 145582967 145583101 -54047049 - L1ME2 LINE L1 -10 6154 6020 258 370 36 50 chr5 145583237 145583518 -54046632 + L2 LINE L2 2579 2855 -459 2440 59 7 3 chr5 145583966 145584271 -54045879 - AluY SINE Alu -5 306 1 1908 157 3 0 chr5 145584273 145584567 -54045583 - AluJb SINE Alu -17 295 1 1738 259 128 41 chr5 145584737 145585216 -54044934 + L2 LINE L2 2166 2602 -711 1350 161 6 141 chr5 145585216 145585368 -54044782 + AluJo SINE Alu 1 172 -140 1288 206 6 59 chr5 145585368 145585689 -54044461 + AluJo SINE Alu 5 308 -4 1948 152 3 16 chr5 145585689 145586004 -54044146 + AluSq SINE Alu 1 311 -2 1350 161 6 141 chr5 145586004 145586017 -54044133 + AluJo SINE Alu 171 184 -128 2335 88 0 10 chr5 145586017 145586313 -54043837 + AluY SINE Alu 1 293 -18 1350 161 6 141 chr5 145586313 145586492 -54043658 + AluJo SINE Alu 184 300 -12 1738 259 128 41 chr5 145586492 145586805 -54043345 + L2 LINE L2 2602 3030 -283 297 202 0 128 chr5 145586823 145586932 -54043218 + L2 LINE L2 3146 3240 -73 1998 147 0 7 chr5 145587518 145587825 -54042325 - AluSx SINE Alu -7 305 1 483 194 0 0 chr5 145588044 145588152 -54041998 + CT-rich Low_complexity Low_complexity 3 110 0 1432 121 0 10 chr5 145588299 145588506 -54041644 - AluSg/x SINE Alu -2 310 106 2141 117 0 29 chr5 145588506 145588814 -54041336 + AluSg SINE Alu 1 299 -11 253 250 0 0 chr5 145588892 145588940 -54041210 - AluJ/monomer SINE Alu -254 48 1 402 325 41 25 chr5 145589192 145589389 -54040761 - MIR3 SINE MIR -6 202 3 2308 95 14 0 chr5 145589518 145589814 -54040336 + AluSp SINE Alu 1 300 -13 1090 164 0 6 chr5 145589814 145589985 -54040165 + AluSg/x SINE Alu 132 301 -9 1451 181 24 31 chr5 145590590 145590883 -54039267 - AluJo SINE Alu -21 291 1 2290 99 3 0 chr5 145590911 145591214 -54038936 + AluSp SINE Alu 1 304 -9 401 276 65 96 chr5 145591250 145591352 -54038798 + L1M4 LINE L1 4801 4905 -1241 2237 100 0 10 chr5 145591352 145591652 -54038498 - AluY SINE Alu -14 297 1 401 276 65 96 chr5 145591652 145591947 -54038203 + L1M4 LINE L1 4905 5186 -960 281 176 0 0 chr5 145591964 145592015 -54038135 + L1M4 LINE L1 3796 3846 -2300 2246 95 3 0 chr5 145592023 145592308 -54037842 + AluSg SINE Alu 3 288 -22 2061 126 0 47 chr5 145592570 145592773 -54037377 - AluSc SINE Alu -6 303 119 2381 85 0 19 chr5 145592773 145593091 -54037059 - AluSq SINE Alu -1 312 1 2061 126 0 47 chr5 145593091 145593205 -54036945 - AluSc SINE Alu -190 119 1 829 187 0 15 chr5 145593306 145593440 -54036710 - FLAM_C SINE Alu -10 133 2 1603 184 0 26 chr5 145593444 145593754 -54036396 - AluJo SINE Alu -6 306 5 2129 119 0 16 chr5 145593774 145594077 -54036073 + AluSx SINE Alu 1 298 -14 669 62 18 18 chr5 145594269 145594382 -54035768 + (TTTC)n Simple_repeat Simple_repeat 4 116 0 1796 118 67 0 chr5 145594382 145594637 -54035513 - AluSg SINE Alu -38 272 1 2296 85 0 33 chr5 145594655 145594961 -54035189 + AluY SINE Alu 1 296 -15 2227 104 0 3 chr5 145595193 145595480 -54034670 + AluSq SINE Alu 1 286 -27 1975 142 7 0 chr5 145595486 145595774 -54034376 + AluSc SINE Alu 1 290 -19 267 143 0 0 chr5 145595799 145595841 -54034309 + Alu SINE Alu 1 42 -257 1421 143 0 10 chr5 145595841 145596050 -54034100 - AluSx SINE Alu -105 207 1 1796 167 7 0 chr5 145596056 145596344 -54033806 - AluSq SINE Alu -23 290 1 637 218 8 16 chr5 145596355 145596479 -54033671 - FLAM_A SINE Alu -10 123 1 2616 187 33 16 chr5 145597187 145597732 -54032418 - L1MB4 LINE L1 0 6180 5627 1405 189 69 10 chr5 145597933 145598089 -54032061 - AluJo SINE Alu -4 308 163 1542 146 127 7 chr5 145598089 145598364 -54031786 - AluSx SINE Alu -4 308 1 1405 189 69 10 chr5 145598364 145598498 -54031652 - AluJo SINE Alu -149 163 1 1624 118 4 9 chr5 145598683 145598912 -54031238 - AluSg SINE Alu -39 271 44 935 129 0 8 chr5 145598912 145599036 -54031114 - AluSg SINE Alu -185 125 1 2212 176 44 37 chr5 145599133 145599354 -54030796 - Tigger2a DNA MER2_type -2274 434 207 2180 104 7 13 chr5 145599354 145599652 -54030498 + AluSc SINE Alu 1 296 -13 2212 176 44 37 chr5 145599652 145599861 -54030289 - Tigger2a DNA MER2_type -2501 207 1 2337 88 7 3 chr5 145599879 145600175 -54029975 + AluSg SINE Alu 1 297 -13 2193 81 7 27 chr5 145600175 145600470 -54029680 + AluY SINE Alu 1 289 -22 1850 162 10 0 chr5 145601265 145601562 -54028588 - AluJb SINE Alu -12 300 1 401 283 21 37 chr5 145601574 145601765 -54028385 + L2 LINE L2 3085 3272 -41 2352 104 0 0 chr5 145601809 145602118 -54028032 - AluSx SINE Alu -3 309 1 216 86 0 0 chr5 145602120 145602155 -54027995 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 2129 122 0 0 chr5 145602155 145602441 -54027709 - AluSq SINE Alu -27 286 1 2214 115 0 0 chr5 145602443 145602738 -54027412 - AluSx SINE Alu -17 295 1 1542 186 74 0 chr5 145602765 145603034 -54027116 - AluJo SINE Alu -23 289 1 1836 141 40 0 chr5 145603062 145603339 -54026811 + AluSx SINE Alu 2 289 -23 435 38 0 0 chr5 145603343 145603396 -54026754 + (TG)n Simple_repeat Simple_repeat 2 54 0 313 311 0 0 chr5 145603396 145603486 -54026664 + L1MC4 LINE L1 6614 6703 -1339 202 143 34 84 chr5 145603491 145603532 -54026618 + (TTATA)n Simple_repeat Simple_repeat 2 44 -70 1904 141 7 7 chr5 145603532 145603857 -54026293 + AluSq SINE Alu 1 325 0 202 143 34 84 chr5 145603857 145603933 -54026217 + (TTATA)n Simple_repeat Simple_repeat 44 114 0 1497 183 48 14 chr5 145604002 145604291 -54025859 + AluJo SINE Alu 1 299 -3 1119 201 14 9 chr5 145605478 145605697 -54024453 + AluJo SINE Alu 1 220 -92 364 39 0 58 chr5 145605697 145605749 -54024401 + AluSc SINE Alu 84 132 -167 1684 136 0 109 chr5 145605764 145606102 -54024048 - AluJb SINE Alu -10 302 2 1913 137 11 14 chr5 145606491 145606806 -54023344 - AluSx SINE Alu 0 314 1 1530 174 18 14 chr5 145606806 145607088 -54023062 - AluSq SINE Alu 0 313 31 2052 103 3 55 chr5 145607104 145607414 -54022736 + AluSc SINE Alu 1 294 -15 2435 94 0 0 chr5 145607429 145607736 -54022414 - AluSc SINE Alu -2 307 1 1467 193 13 86 chr5 145607736 145607811 -54022339 - L1MB7 LINE L1 -67 6117 6038 2361 85 0 19 chr5 145607811 145608127 -54022023 - AluSg SINE Alu 0 310 1 2124 121 3 0 chr5 145608127 145608424 -54021726 - AluSp SINE Alu -15 298 1 885 158 0 0 chr5 145608427 145608560 -54021590 - AluJo/FLAM SINE Alu -169 133 1 1467 193 13 86 chr5 145608560 145608852 -54021298 - L1MB7 LINE L1 -147 6037 5772 1132 133 84 61 chr5 145610319 145610423 -54019727 + L1MA9 LINE L1 6038 6138 -174 2396 90 0 0 chr5 145610423 145610724 -54019426 - AluSx SINE Alu -11 301 1 1132 133 84 61 chr5 145610724 145610882 -54019268 + L1MA9 LINE L1 6138 6306 -6 224 320 91 9 chr5 145610980 145611116 -54019034 - MIR3 SINE MIR -64 144 8 2051 110 0 7 chr5 145611138 145611419 -54018731 + AluSg SINE Alu 1 279 -31 234 0 0 0 chr5 145611474 145611500 -54018650 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1507 198 0 26 chr5 145611506 145611809 -54018341 - AluJb SINE Alu -17 295 1 384 250 19 10 chr5 145611880 145611984 -54018166 + MER103 DNA DNA 2 106 -60 432 195 171 93 chr5 145612172 145612303 -54017847 + MER112 DNA MER1_type 39 193 -67 1407 163 47 106 chr5 145612303 145612623 -54017527 + AluJo SINE Alu 1 301 -1 432 195 171 93 chr5 145612623 145612696 -54017454 + MER112 DNA MER1_type 193 259 -1 649 155 21 0 chr5 145612712 145612809 -54017341 - FRAM SINE Alu -19 157 59 1186 65 0 0 chr5 145613301 145613440 -54016710 + AluY SINE Alu 155 293 -18 186 171 0 0 chr5 145615006 145615047 -54015103 + T-rich Low_complexity Low_complexity 3 43 0 2256 92 0 7 chr5 145615409 145615704 -54014446 - AluSx SINE Alu -19 293 1 1895 68 0 4 chr5 145615927 145616162 -54013988 + AluY SINE Alu 63 296 -15 462 331 112 64 chr5 145616361 145616483 -54013667 + L3 LINE CR1 1070 1185 -392 1930 144 3 0 chr5 145616483 145616803 -54013347 + AluSx SINE Alu 1 321 0 462 331 112 64 chr5 145616803 145617163 -54012987 + L3 LINE CR1 1185 1576 -1 234 254 0 30 chr5 145617344 145617411 -54012739 + (TATATG)n Simple_repeat Simple_repeat 1 65 0 1613 199 0 7 chr5 145617460 145617761 -54012389 + AluJb SINE Alu 1 299 -13 2123 116 38 0 chr5 145617999 145618292 -54011858 - AluSx SINE Alu -8 304 1 3751 194 32 22 chr5 145618292 145619077 -54011073 - L1M4c LINE L1 -5589 795 3 309 263 0 26 chr5 145619077 145619153 -54010997 + L2 LINE L2 3239 3312 -1 620 255 60 0 chr5 145619154 145619338 -54010812 - L2 LINE L2 -747 2567 2373 252 0 0 0 chr5 145619792 145619820 -54010330 + (T)n Simple_repeat Simple_repeat 1 28 0 983 194 76 17 chr5 145619863 145620100 -54010050 + 7SLRNA srpRNA srpRNA 70 320 0 826 177 0 8 chr5 145620177 145620307 -54009843 + FLAM_C SINE Alu 5 133 0 2199 117 7 0 chr5 145621160 145621459 -54008691 + AluSx SINE Alu 1 301 -11 2402 64 6 52 chr5 145621459 145621787 -54008363 + AluSp SINE Alu 1 313 0 816 281 242 21 chr5 145621840 145622324 -54007826 - MLT1G1 LTR MaLR 0 595 5 2366 86 3 0 chr5 145622404 145622705 -54007445 - AluSp SINE Alu -11 302 1 1685 170 42 52 chr5 145622715 145622768 -54007382 - L1MB4 LINE L1 0 6180 6128 1876 137 0 49 chr5 145622768 145623096 -54007054 - AluSx SINE Alu 0 312 1 1685 170 42 52 chr5 145623096 145623447 -54006703 - L1MB4 LINE L1 -52 6128 5780 1458 146 56 24 chr5 145623469 145623757 -54006393 - MER2 DNA MER2_type -47 298 2 728 139 9 0 chr5 145623910 145624018 -54006132 - FLAM_A SINE Alu -12 130 22 2193 122 0 3 chr5 145624049 145624352 -54005798 + AluSq SINE Alu 1 302 -11 919 157 0 15 chr5 145624359 145624493 -54005657 + FLAM_A SINE Alu 2 133 0 864 204 60 88 chr5 145624498 145624548 -54005602 - L1ME2 LINE L1 -135 6029 5979 2151 122 0 0 chr5 145624548 145624842 -54005308 - AluSx SINE Alu -18 294 1 864 204 60 88 chr5 145624842 145625109 -54005041 - L1ME2 LINE L1 -185 5979 5721 1387 230 58 54 chr5 145625134 145625262 -54004888 - L1MD2 LINE L1 -271 6088 5962 2001 127 3 0 chr5 145625262 145625569 -54004581 - AluSp SINE Alu 0 308 1 1387 230 58 54 chr5 145625569 145625596 -54004554 - L1MD2 LINE L1 -397 5962 5937 1468 150 84 52 chr5 145625596 145625883 -54004267 + AluJo SINE Alu 1 296 -16 1387 230 58 54 chr5 145625883 145625984 -54004166 - L1MD2 LINE L1 -422 5937 5838 1529 188 13 26 chr5 145625984 145626293 -54003857 - AluJb SINE Alu -7 305 1 1387 230 58 54 chr5 145626293 145626515 -54003635 - L1MD2 LINE L1 -521 5838 5605 * 1587 243 91 75 chr5 145626506 145626746 -54003404 - L1ME LINE L1 -4844 1236 1001 2238 126 10 0 chr5 145626746 145627055 -54003095 - AluSp SINE Alu -1 312 1 1587 243 91 75 chr5 145627055 145627583 -54002567 - L1ME LINE L1 -5079 1001 482 2128 109 7 7 chr5 145627583 145627886 -54002264 - AluSx SINE Alu -9 303 1 1587 243 91 75 chr5 145627886 145628368 -54001782 - L1ME LINE L1 -5598 482 9 255 208 42 69 chr5 145628419 145628491 -54001659 - MLT1L LTR MaLR -375 240 171 1458 169 86 29 chr5 145628505 145628784 -54001366 - AluJb SINE Alu 0 312 18 1061 226 41 8 chr5 145628785 145629028 -54001122 + Charlie1b DNA MER1_type 20 270 -253 1188 171 38 5 chr5 145629028 145629239 -54000911 - AluJb SINE Alu -10 302 85 29 28 0 0 chr5 145629337 145629373 -54000777 + AT_rich Low_complexity Low_complexity 1 36 0 2125 110 10 0 chr5 145629766 145630058 -54000092 - AluSg SINE Alu -15 295 1 436 128 59 182 chr5 145630067 145630111 -54000039 + Charlie1b DNA MER1_type 360 408 -2353 2186 121 3 13 chr5 145630111 145630424 -53999726 - AluSq SINE Alu -3 310 1 436 128 59 182 chr5 145630424 145630529 -53999621 + Charlie1b DNA MER1_type 408 484 -2277 2070 117 28 0 chr5 145630529 145630819 -53999331 + AluSq SINE Alu 1 298 -15 436 128 59 182 chr5 145630819 145630855 -53999295 + Charlie1b DNA MER1_type 484 523 0 311 271 13 80 chr5 145630855 145631004 -53999146 - MLT1L LTR MaLR -460 155 17 376 170 189 119 chr5 145631541 145631646 -53998504 - MER5A DNA MER1_type 0 189 68 1676 102 158 34 chr5 145631646 145631912 -53998238 - AluSg SINE Alu -1 299 1 376 170 189 119 chr5 145631912 145631965 -53998185 - MER5A DNA MER1_type -121 68 20 2453 107 63 9 chr5 145632807 145633154 -53996996 - MER47A DNA MER2_type 0 366 1 383 291 57 7 chr5 145633574 145633715 -53996435 - MIR SINE MIR -47 215 68 300 241 78 131 chr5 145633743 145633934 -53996216 - MER58C DNA MER1_type -1 214 34 2226 102 0 25 chr5 145633953 145634267 -53995883 - AluY SINE Alu -5 306 1 2311 81 3 19 chr5 145634319 145634627 -53995523 + AluSp SINE Alu 1 303 -10 788 174 8 8 chr5 145634672 145634804 -53995346 - FLAM_C SINE Alu -10 133 2 2066 118 0 16 chr5 145634932 145635236 -53994914 - AluSq SINE Alu -14 299 1 2382 103 0 0 chr5 145635316 145635628 -53994522 + AluSx SINE Alu 1 312 0 268 229 6 127 chr5 145636566 145636652 -53993498 - MER103 DNA DNA -19 147 89 2053 131 0 3 chr5 145636652 145636957 -53993193 - AluSx SINE Alu -8 304 1 268 229 6 127 chr5 145636957 145637036 -53993114 - MER103 DNA DNA -77 89 2 210 333 95 0 chr5 145637069 145637195 -53992955 - MIR3 SINE MIR -29 179 42 2005 124 0 4 chr5 145637255 145637530 -53992620 - AluSx SINE Alu -38 274 1 2279 95 0 10 chr5 145637540 145637835 -53992315 - AluSc SINE Alu -17 292 1 1335 188 216 39 chr5 145637853 145638211 -53991939 - MLT1F LTR MaLR -8 534 78 1384 174 62 40 chr5 145638211 145638517 -53991633 - AluJo SINE Alu 0 312 1 1335 188 216 39 chr5 145638517 145638609 -53991541 - MLT1F LTR MaLR -464 78 4 1414 140 136 4 chr5 145638641 145638913 -53991237 + MER44D DNA MER2_type 30 607 -2 180 0 0 0 chr5 145639204 145639224 -53990926 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1839 170 3 0 chr5 145639226 145639508 -53990642 - AluJb SINE Alu -29 283 1 1219 184 5 18 chr5 145639556 145639779 -53990371 + AluJo SINE Alu 1 220 -92 2451 81 3 0 chr5 145640019 145640329 -53989821 + AluY SINE Alu 1 311 0 2170 105 0 29 chr5 145642541 145642855 -53987295 - AluSp SINE Alu -8 305 1 1172 67 0 0 chr5 145642855 145642990 -53987160 - AluSp SINE Alu -178 135 1 2364 89 0 3 chr5 145643016 145643320 -53986830 + AluSp SINE Alu 1 303 -10 198 0 0 0 chr5 145643332 145643354 -53986796 + (GA)n Simple_repeat Simple_repeat 1 22 0 1501 186 14 17 chr5 145644136 145644431 -53985719 - AluJo SINE Alu -18 294 1 195 42 0 0 chr5 145644504 145644528 -53985622 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2224 96 0 4 chr5 145644535 145644816 -53985334 - AluSg SINE Alu -30 280 1 1266 144 0 5 chr5 145644989 145645176 -53984974 - AluSg/x SINE Alu -42 268 83 263 156 31 16 chr5 145645257 145645321 -53984829 - L1MB3 LINE L1 -8 6175 6111 370 167 0 28 chr5 145645337 145645409 -53984741 + L1M4 LINE L1 2964 3033 -3113 2074 142 0 13 chr5 145645451 145645630 -53984520 - AluSx SINE Alu -1 311 136 2510 62 0 16 chr5 145645630 145645938 -53984212 - AluY SINE Alu -8 303 1 2074 142 0 13 chr5 145645938 145646069 -53984081 - AluSx SINE Alu -176 136 5 2142 98 0 74 chr5 145646126 145646451 -53983699 - AluSc SINE Alu -8 301 1 472 239 39 33 chr5 145646457 145646483 -53983667 - L1M4c LINE L1 -4155 2229 2205 1971 123 48 0 chr5 145646483 145646775 -53983375 - AluSx SINE Alu -6 306 1 472 239 39 33 chr5 145646775 145646928 -53983222 - L1M4c LINE L1 -4179 2205 2049 1198 185 19 50 chr5 145646938 145647198 -53982952 - AluJo SINE Alu -23 289 38 1522 174 94 4 chr5 145647208 145647473 -53982677 - AluJb SINE Alu -23 289 1 810 188 143 15 chr5 145647481 145647751 -53982399 - L1M4c LINE L1 -4335 2049 1655 2046 100 75 4 chr5 145647754 145648034 -53982116 - AluSc SINE Alu -8 301 2 2131 91 47 0 chr5 145648907 145649204 -53980946 + AluSq SINE Alu 1 311 -2 195 167 0 0 chr5 145650029 145650071 -53980079 + (TCTCTG)n Simple_repeat Simple_repeat 4 45 0 1976 228 84 43 chr5 145651662 145651859 -53978291 - L1ME3A LINE L1 -9 6161 5973 2353 107 0 0 chr5 145651859 145652169 -53977981 - AluSg SINE Alu 0 310 1 1976 228 84 43 chr5 145652169 145652637 -53977513 - L1ME3A LINE L1 -197 5973 5469 200 148 16 49 chr5 145653160 145653221 -53976929 + T-rich Low_complexity Low_complexity 2 60 0 324 154 0 0 chr5 145654274 145654326 -53975824 + Alu SINE Alu 1 52 -256 2356 82 3 7 chr5 145655097 145655402 -53974748 + AluSp SINE Alu 1 304 -9 2201 82 0 35 chr5 145655473 145655788 -53974362 - AluSc SINE Alu -5 304 1 2211 113 0 3 chr5 145655855 145656157 -53973993 - AluY SINE Alu -10 301 1 2003 104 3 95 chr5 145656543 145656880 -53973270 - AluSx SINE Alu -6 306 1 28 0 0 0 chr5 145657369 145657397 -53972753 + AT_rich Low_complexity Low_complexity 1 28 0 2014 119 18 0 chr5 145658331 145658461 -53971689 + AluSx SINE Alu 1 127 -185 2139 119 7 3 chr5 145658461 145658754 -53971396 + AluSg SINE Alu 1 294 -16 2014 119 18 0 chr5 145658754 145658908 -53971242 + AluSx SINE Alu 127 290 -22 1996 137 23 7 chr5 145659064 145659363 -53970787 + AluSx SINE Alu 1 304 -8 1696 159 43 23 chr5 145659379 145659681 -53970469 - AluJo SINE Alu -2 310 3 230 157 148 52 chr5 145659736 145659851 -53970299 - Charlie1 DNA MER1_type -170 2591 2466 2235 106 10 3 chr5 145659865 145660166 -53969984 - AluSq SINE Alu -7 306 4 2294 111 0 0 chr5 145660232 145660538 -53969612 - AluSg SINE Alu -4 306 1 465 193 37 134 chr5 145660642 145660671 -53969479 + MIR SINE MIR 88 118 -144 2342 101 3 0 chr5 145660671 145660969 -53969181 - AluSp SINE Alu -14 299 1 465 193 37 134 chr5 145660969 145661126 -53969024 + MIR SINE MIR 118 256 -6 1689 164 76 48 chr5 145661175 145661529 -53968621 + MLT1A1 LTR MaLR 1 364 -1 817 147 0 22 chr5 145661661 145661797 -53968353 + FLAM_C SINE Alu 1 133 0 1723 115 115 7 chr5 145662085 145662354 -53967796 + AluSx SINE Alu 1 298 -14 800 226 0 0 chr5 145662361 145662507 -53967643 + AluJo SINE Alu 3 148 -164 1954 132 31 3 chr5 145662623 145662912 -53967238 + AluJb SINE Alu 1 297 -15 276 231 10 10 chr5 145663092 145663178 -53966972 - MIR SINE MIR -105 103 18 2139 115 13 26 chr5 145663388 145663692 -53966458 - AluSx SINE Alu -12 300 1 2221 105 3 3 chr5 145663723 145664027 -53966123 + AluSc SINE Alu 1 304 -5 765 238 0 0 chr5 145664083 145664234 -53965916 - FRAM SINE Alu -14 152 2 1518 203 7 14 chr5 145664243 145664529 -53965621 - AluJo SINE Alu -25 287 4 1156 241 70 19 chr5 145664532 145664802 -53965348 - MER77 LTR ERV1 -268 337 54 2069 118 17 0 chr5 145665004 145665291 -53964859 + AluSx SINE Alu 1 292 -20 269 181 14 111 chr5 145665448 145665520 -53964630 - MLT1I LTR MaLR -277 132 68 190 341 54 36 chr5 145665611 145665778 -53964372 + L3 LINE CR1 1270 1439 -138 2166 110 0 17 chr5 145665904 145666205 -53963945 + AluSx SINE Alu 1 296 -16 1947 138 17 0 chr5 145666682 145666973 -53963177 - AluSx SINE Alu -16 296 1 760 165 45 0 chr5 145667124 145667257 -53962893 - AluJb SINE Alu -6 306 168 2060 109 21 7 chr5 145667268 145667551 -53962599 - AluSx SINE Alu -25 287 1 265 311 115 7 chr5 145667574 145667722 -53962428 - MIR SINE MIR -64 198 35 1442 183 37 34 chr5 145668030 145668325 -53961825 - AluJo SINE Alu -11 301 6 271 173 182 127 chr5 145668384 145668424 -53961726 - MER77 LTR ERV1 -258 347 311 2358 92 7 0 chr5 145668424 145668730 -53961420 - AluSg SINE Alu 0 310 3 271 173 182 127 chr5 145668730 145668799 -53961351 - MER77 LTR ERV1 -294 311 232 2389 96 0 0 chr5 145670987 145671290 -53958860 - AluSg SINE Alu -7 303 1 1753 131 37 20 chr5 145671402 145671699 -53958451 - AluSq SINE Alu -11 302 1 2165 79 4 0 chr5 145671727 145672004 -53958146 + AluY SINE Alu 1 278 -33 225 0 0 0 chr5 145672006 145672031 -53958119 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 2228 82 30 33 chr5 145672072 145672377 -53957773 + AluSp SINE Alu 2 305 -8 2327 82 17 0 chr5 145672377 145672670 -53957480 + AluSp SINE Alu 1 299 -14 2241 100 3 0 chr5 145672672 145672962 -53957188 + AluSg SINE Alu 1 291 -19 2316 110 0 0 chr5 145673344 145673654 -53956496 - AluSx SINE Alu -2 310 1 220 272 0 37 chr5 145673681 145673762 -53956388 + MIR SINE MIR 181 258 -4 2316 94 10 0 chr5 145673844 145674143 -53956007 - AluSp SINE Alu -11 302 1 2168 117 0 13 chr5 145674173 145674473 -53955677 - AluSq SINE Alu -17 296 1 218 31 0 31 chr5 145674605 145674634 -53955516 + (CA)n Simple_repeat Simple_repeat 1 59 0 218 31 0 31 chr5 145674634 145674666 -53955484 + (CA)n Simple_repeat Simple_repeat 2 32 0 369 0 0 0 chr5 145674691 145674732 -53955418 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 908 145 0 0 chr5 145674789 145674920 -53955230 - AluSq/x SINE Alu -177 135 5 979 130 47 52 chr5 145675138 145675330 -53954820 + MER20 DNA MER1_type 29 219 0 267 257 83 0 chr5 145675429 145675538 -53954612 + MIR SINE MIR 132 249 -13 2304 86 3 0 chr5 145675646 145675936 -53954214 - AluY SINE Alu -20 291 1 1056 93 0 0 chr5 145676451 145676580 -53953570 + AluSp SINE Alu 1 129 -184 2516 72 0 0 chr5 145676582 145676888 -53953262 + AluY SINE Alu 3 308 -3 1471 71 6 0 chr5 145676895 145677077 -53953073 + AluSp SINE Alu 120 302 -11 598 148 102 62 chr5 145677231 145677359 -53952791 - FLAM_A SINE Alu 0 133 1 2251 95 3 0 chr5 145677497 145677781 -53952369 + AluSg SINE Alu 1 285 -25 280 31 0 0 chr5 145677975 145678007 -53952143 - U2 snRNA snRNA -153 35 4 2162 91 29 0 chr5 145680063 145680380 -53949770 + AluSx SINE Alu 1 325 0 25 0 0 0 chr5 145680944 145680969 -53949181 + AT_rich Low_complexity Low_complexity 1 25 0 22 94 0 0 chr5 145682550 145682614 -53947536 + AT_rich Low_complexity Low_complexity 1 64 0 1156 134 0 43 chr5 145683531 145683718 -53946432 - AluJo/FRAM SINE Alu -5 307 129 1541 119 21 0 chr5 145683720 145683963 -53946187 - AluSx SINE Alu -1 311 64 1994 114 0 0 chr5 145683963 145684225 -53945925 + AluSg1 SINE Alu 1 264 -45 1423 152 78 31 chr5 145684380 145684636 -53945514 - AluJo SINE Alu -22 290 23 1425 173 0 89 chr5 145684649 145684973 -53945177 - AluJo SINE Alu -12 300 6 976 198 0 0 chr5 145685282 145685439 -53944711 - AluJ SINE Alu -27 285 129 204 217 0 0 chr5 145685442 145685488 -53944662 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 1701 120 12 4 chr5 145685489 145685739 -53944411 - AluSg SINE Alu -15 295 44 782 176 8 8 chr5 145685742 145685873 -53944277 - AluJ SINE Alu -180 132 2 2453 73 7 0 chr5 145686209 145686509 -53943641 + AluY SINE Alu 1 302 -9 24 67 0 0 chr5 145687159 145687204 -53942946 + AT_rich Low_complexity Low_complexity 1 45 0 932 178 7 0 chr5 145687373 145687519 -53942631 + FRAM SINE Alu 1 140 -36 2540 87 0 0 chr5 145687524 145687836 -53942314 - AluSx SINE Alu 0 312 1 262 139 0 0 chr5 145687981 145688049 -53942101 + Alu SINE Alu 246 313 0 1592 179 32 21 chr5 145688500 145688785 -53941365 + AluJb SINE Alu 1 288 -24 235 326 38 30 chr5 145689016 145689148 -53941002 - L2 LINE L2 -481 2833 2701 183 200 25 0 chr5 145689306 145689346 -53940804 - L2 LINE L2 -837 2477 2437 180 0 0 0 chr5 145689635 145689655 -53940495 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2335 69 3 0 chr5 145689658 145689946 -53940204 - AluY SINE Alu -22 289 1 2470 68 0 7 chr5 145690098 145690408 -53939742 + AluY SINE Alu 1 308 -3 2567 61 0 0 chr5 145690659 145690954 -53939196 + AluSc SINE Alu 1 295 -14 1829 165 13 3 chr5 145690982 145691285 -53938865 - AluJb SINE Alu -6 306 1 2329 102 0 7 chr5 145691368 145691675 -53938475 + AluSx SINE Alu 5 306 -6 301 169 26 52 chr5 145691831 145691908 -53938242 - L1MC5 LINE L1 -51 7910 7836 408 239 39 51 chr5 145691973 145692102 -53938048 - L1MC5 LINE L1 -128 7833 7707 2324 98 3 0 chr5 145692102 145692398 -53937752 - AluSg SINE Alu -13 297 1 408 239 39 51 chr5 145692398 145692502 -53937648 - L1MC5 LINE L1 -254 7707 7603 2170 92 3 10 chr5 145692520 145692848 -53937302 - AluSg SINE Alu 0 310 1 1940 214 96 29 chr5 145692922 145692968 -53937182 - L1M4 LINE L1 -1214 4932 4891 2237 110 0 0 chr5 145692968 145693260 -53936890 - AluY SINE Alu -13 298 7 1940 214 96 29 chr5 145693260 145693867 -53936283 - L1M4 LINE L1 -1255 4891 4235 22 0 0 0 chr5 145693867 145693889 -53936261 + AT_rich Low_complexity Low_complexity 1 22 0 2386 101 3 0 chr5 145693889 145694197 -53935953 + AluSp SINE Alu 1 309 -4 882 97 7 41 chr5 145694203 145694240 -53935910 - L1MA1 LINE L1 -15 6287 6250 1973 128 0 47 chr5 145694240 145694342 -53935808 - AluSx SINE Alu -8 304 199 1903 135 24 17 chr5 145694342 145694639 -53935511 - AluSx SINE Alu -13 299 1 1973 128 0 47 chr5 145694639 145694855 -53935295 - AluSx SINE Alu -113 199 1 882 97 7 41 chr5 145694855 145694962 -53935188 - L1MA1 LINE L1 -52 6250 6148 2481 78 3 3 chr5 145694962 145695268 -53934882 - AluSp SINE Alu -7 306 1 318 199 41 128 chr5 145695282 145695442 -53934708 - L1MC5 LINE L1 -992 6969 6827 198 71 0 0 chr5 145695442 145695470 -53934680 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 318 199 41 128 chr5 145695470 145695505 -53934645 - L1MC5 LINE L1 -1134 6827 6791 496 173 36 16 chr5 145695748 145695974 -53934176 + AluJ SINE Alu 15 296 -16 2413 88 3 7 chr5 145696071 145696378 -53933772 + AluSq SINE Alu 1 306 -7 321 328 156 5 chr5 145696857 145697049 -53933101 - MIR SINE MIR 0 262 42 328 189 116 0 chr5 145697551 145697646 -53932504 + MER53 DNA DNA 84 189 0 24 0 0 0 chr5 145698017 145698041 -53932109 + GC_rich Low_complexity Low_complexity 1 24 0 445 284 93 38 chr5 145698569 145698805 -53931345 - MIR SINE MIR -7 255 7 546 268 27 107 chr5 145699125 145699192 -53930958 - MIR SINE MIR -21 241 170 876 179 19 12 chr5 145699192 145699354 -53930796 - FRAM SINE Alu -2 164 2 2370 92 0 0 chr5 145699363 145699666 -53930484 - AluSx SINE Alu -9 303 1 546 268 27 107 chr5 145699666 145699849 -53930301 - MIR SINE MIR -100 162 2 835 278 173 16 chr5 145699872 145700322 -53929828 + LTR33 LTR ERVL 1 521 0 524 283 114 49 chr5 145700595 145701303 -53928847 - L2 LINE L2 -3 3269 2521 2248 106 0 20 chr5 145701304 145701471 -53928679 - AluSx SINE Alu -13 299 139 2415 77 7 7 chr5 145701471 145701771 -53928379 - AluSq SINE Alu -13 300 1 2248 106 0 20 chr5 145701771 145701906 -53928244 - AluSx SINE Alu -173 139 3 225 279 107 57 chr5 145701999 145702121 -53928029 - MIR SINE MIR -12 250 123 2248 129 0 0 chr5 145702413 145702715 -53927435 + AluSx SINE Alu 1 302 -10 2273 103 3 3 chr5 145703491 145703791 -53926359 - AluSx SINE Alu -12 300 1 646 228 29 0 chr5 145703935 145704106 -53926044 - L1MEc LINE L1 -4567 1996 1821 2198 116 0 19 chr5 145704121 145704439 -53925711 - AluSx SINE Alu 0 312 1 1050 233 58 71 chr5 145704446 145704868 -53925282 - L1MEc LINE L1 -4782 1665 1239 309 26 0 0 chr5 145704868 145704906 -53925244 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 7346 42 17 37 chr5 145704906 145706568 -53923582 - SVA Other Other -683 1363 7 1050 233 58 71 chr5 145706568 145706704 -53923446 - L1MEc LINE L1 -5206 1241 1063 1964 120 67 30 chr5 145706704 145706841 -53923309 + AluSx SINE Alu 1 132 -180 2271 107 3 10 chr5 145706841 145707151 -53922999 + AluSg SINE Alu 1 308 -2 1964 120 67 30 chr5 145707151 145707313 -53922837 + AluSx SINE Alu 132 311 -1 2246 106 7 7 chr5 145707332 145707634 -53922516 + AluSq SINE Alu 6 307 -6 2349 100 0 3 chr5 145707634 145707933 -53922217 + AluSx SINE Alu 1 299 -13 2406 88 3 0 chr5 145707948 145708244 -53921906 - AluSp SINE Alu -16 297 1 665 147 0 0 chr5 145708251 145708360 -53921790 - AluSg/x SINE Alu 0 310 202 3412 238 42 19 chr5 145708398 145708617 -53921533 - L1MEc LINE L1 -5424 1139 927 2358 100 7 0 chr5 145708617 145708918 -53921232 - AluSq SINE Alu -10 303 1 3412 238 42 19 chr5 145708918 145709642 -53920508 - L1MEc LINE L1 -5636 927 174 932 224 4 21 chr5 145709664 145709901 -53920249 + L1MA4 LINE L1 6068 6300 0 306 322 13 47 chr5 145710499 145710648 -53919502 + MIR SINE MIR 37 180 -82 2179 115 0 7 chr5 145710869 145711183 -53918967 - AluSx SINE Alu 0 312 1 2205 120 7 0 chr5 145712186 145712478 -53917672 - AluSq SINE Alu -19 294 1 2040 150 3 0 chr5 145712926 145713220 -53916930 - AluSx SINE Alu -17 295 1 14499 114 17 77 chr5 145713412 145713738 -53916412 - Tigger1 DNA MER2_type 0 2418 2074 1832 160 17 14 chr5 145713738 145714026 -53916124 - AluJb SINE Alu -23 289 1 14499 114 17 77 chr5 145714026 145714093 -53916057 - Tigger1 DNA MER2_type -344 2074 2005 2264 125 3 10 chr5 145714093 145714406 -53915744 - AluSx SINE Alu -1 311 1 14499 114 17 77 chr5 145714406 145715347 -53914803 - Tigger1 DNA MER2_type -413 2005 1009 1776 160 42 0 chr5 145715347 145715634 -53914516 + AluJb SINE Alu 9 307 -5 14499 114 17 77 chr5 145715634 145716869 -53913281 - Tigger1 DNA MER2_type -1409 1009 1 275 191 16 0 chr5 145717768 145717831 -53912319 + CT-rich Low_complexity Low_complexity 1 64 0 620 158 11 0 chr5 145717954 145718049 -53912101 - FLAM_A SINE Alu -46 96 1 2191 89 24 7 chr5 145718055 145718346 -53911804 - AluSg SINE Alu -3 307 12 1882 162 0 23 chr5 145718588 145718890 -53911260 + AluJb SINE Alu 1 295 -17 423 297 55 21 chr5 145719318 145719463 -53910687 - MIR SINE MIR -112 150 1 2576 53 20 0 chr5 145720336 145720639 -53909511 - AluY SINE Alu -2 309 1 2069 119 27 7 chr5 145720639 145720932 -53909218 - AluSx SINE Alu -13 299 1 2112 127 0 3 chr5 145720961 145721245 -53908905 - AluSx SINE Alu -29 283 1 1065 206 90 62 chr5 145721333 145721435 -53908715 - L1ME3A LINE L1 -22 6148 6050 2038 148 0 0 chr5 145721435 145721733 -53908417 + AluSx SINE Alu 13 310 -2 1065 206 90 62 chr5 145721733 145721984 -53908166 - L1ME3A LINE L1 -120 6050 5785 2267 107 0 7 chr5 145722489 145722787 -53907363 + AluSx SINE Alu 1 296 -16 2306 92 0 10 chr5 145724087 145724391 -53905759 + AluSq SINE Alu 1 301 -12 2262 122 0 0 chr5 145724488 145724784 -53905366 - AluSx SINE Alu -16 296 1 508 192 20 10 chr5 145725070 145725169 -53904981 - MIR SINE MIR -112 150 51 236 235 0 59 chr5 145725229 145725297 -53904853 - MIR SINE MIR -16 246 183 1863 154 0 17 chr5 145725323 145725621 -53904529 + AluJb SINE Alu 6 298 -14 582 223 134 32 chr5 145725840 145725997 -53904153 + AluJb SINE Alu 137 309 -3 1763 152 34 24 chr5 145726256 145726552 -53903598 - AluSq SINE Alu -14 299 1 2189 103 10 0 chr5 145726829 145727119 -53903031 - AluSx SINE Alu -18 294 2 1630 158 40 37 chr5 145727325 145727622 -53902528 - AluJb SINE Alu -14 298 1 2685 29 0 13 chr5 145727658 145727965 -53902185 + AluY SINE Alu 1 303 -8 212 179 0 0 chr5 145728006 145728045 -53902105 + A-rich Low_complexity Low_complexity 1 39 0 2045 112 0 3 chr5 145729563 145729870 -53900280 - AluSx SINE Alu 0 306 1 2250 65 0 4 chr5 145729891 145730169 -53899981 - AluY SINE Alu -3 308 32 281 350 64 35 chr5 145730349 145730552 -53899598 - MIR SINE MIR -6 256 48 2328 88 7 0 chr5 145730943 145731237 -53898913 - AluSg SINE Alu -14 296 1 2273 103 0 3 chr5 145731315 145731616 -53898534 - AluSg SINE Alu -8 302 3 1894 167 7 7 chr5 145731618 145731918 -53898232 - AluJo SINE Alu -12 300 1 361 130 119 33 chr5 145731928 145732020 -53898130 - AluYb8 SINE Alu -3 305 243 2279 110 3 3 chr5 145732080 145732379 -53897771 + AluSx SINE Alu 2 300 -12 188 229 0 0 chr5 145732718 145732753 -53897397 - MIR SINE MIR -143 65 31 230 313 0 31 chr5 145733337 145733401 -53896749 + MIR SINE MIR 21 82 -126 2043 141 0 3 chr5 145733483 145733773 -53896377 + AluJb SINE Alu 1 289 -23 1925 165 10 0 chr5 145734481 145734784 -53895366 - AluJo SINE Alu -6 306 1 212 346 74 0 chr5 145735219 145735300 -53894850 + L2 LINE L2 3168 3254 -18 2570 156 139 0 chr5 145736036 145736541 -53893609 - MER90 LTR ERV1 0 575 1 26 0 0 0 chr5 145736782 145736808 -53893342 + AT_rich Low_complexity Low_complexity 1 26 0 1773 262 135 18 chr5 145736816 145737783 -53892367 - L2 LINE L2 0 3313 2224 1087 303 102 20 chr5 145737869 145738358 -53891792 - L2 LINE L2 -1830 1484 956 2287 108 0 3 chr5 145738372 145738667 -53891483 - AluSq SINE Alu -17 296 3 2410 91 0 0 chr5 145738731 145739027 -53891123 + AluSg SINE Alu 1 296 -14 2182 127 0 13 chr5 145739133 145739447 -53890703 - AluJb SINE Alu -2 310 1 1636 186 17 14 chr5 145739703 145739994 -53890156 + AluJo SINE Alu 1 292 -20 2257 104 10 0 chr5 145741920 145742228 -53887922 + AluSx SINE Alu 2 312 0 25 0 0 0 chr5 145743133 145743158 -53886992 + AT_rich Low_complexity Low_complexity 1 25 0 1937 161 3 0 chr5 145794157 145794462 -53835688 - AluJb SINE Alu -6 306 1 333 0 0 0 chr5 145794474 145794511 -53835639 + (TG)n Simple_repeat Simple_repeat 2 38 0 1650 196 0 7 chr5 145794511 145794792 -53835358 - AluJb SINE Alu -28 284 6 42 0 0 0 chr5 145794797 145794839 -53835311 + AT_rich Low_complexity Low_complexity 1 42 0 866 130 0 0 chr5 145794841 145794956 -53835194 - FLAM_C SINE Alu -28 115 1 811 267 58 64 chr5 145795982 145796229 -53833921 - L1MC5 LINE L1 -36 7925 7678 2267 88 3 14 chr5 145796229 145796524 -53833626 - AluSg SINE Alu -18 292 1 811 267 58 64 chr5 145796524 145796842 -53833308 - L1MC5 LINE L1 -283 7678 7363 185 200 0 0 chr5 145798333 145798373 -53831777 - L2 LINE L2 -4 3268 3229 1518 172 7 32 chr5 145799097 145799376 -53830774 - AluJo SINE Alu -1 311 40 2125 129 0 16 chr5 145799383 145799693 -53830457 - AluSq SINE Alu -3 310 6 855 138 0 8 chr5 145799703 145799833 -53830317 - FLAM_C SINE Alu -3 140 12 2185 127 13 0 chr5 145800816 145801124 -53829026 + AluSx SINE Alu 1 312 0 780 290 156 26 chr5 145801191 145801923 -53828227 - L1ME4a LINE L1 -16 6105 5277 322 286 12 0 chr5 145801980 145802064 -53828086 + L2 LINE L2 3187 3271 -1 2158 98 14 20 chr5 145802566 145802862 -53827288 - AluSc SINE Alu -15 294 1 2058 148 0 0 chr5 145802972 145803275 -53826875 - AluSx SINE Alu -9 303 1 1053 178 22 67 chr5 145803324 145803357 -53826793 + AluJo SINE Alu 87 120 -192 2473 64 0 0 chr5 145803357 145803652 -53826498 - AluY SINE Alu -16 295 1 1053 178 22 67 chr5 145803652 145803843 -53826307 + AluJo SINE Alu 120 301 -11 1444 170 4 0 chr5 145804503 145804738 -53825412 + MER46A DNA MER2_type 1 236 0 650 325 79 37 chr5 145804984 145805716 -53824434 + HAL1b LINE L1 61 823 -525 1575 179 131 148 chr5 145805902 145806720 -53823430 + L1MC5 LINE L1 6728 7531 -430 453 206 77 77 chr5 145806817 145807026 -53823124 + L1ME3A LINE L1 5962 6170 0 390 285 33 26 chr5 145807399 145807550 -53822600 + MIR SINE MIR 27 178 -84 562 196 0 0 chr5 145807640 145807737 -53822413 + L1M4 LINE L1 656 752 -5790 192 40 0 0 chr5 145807785 145807810 -53822340 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 933 219 60 0 chr5 145807811 145807848 -53822302 + AluJo SINE Alu 89 122 -190 210 37 0 0 chr5 145807848 145807875 -53822275 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 933 219 60 0 chr5 145807875 145808020 -53822130 + AluJo SINE Alu 122 282 -30 3036 124 34 0 chr5 145808020 145808494 -53821656 + L1MA6 LINE L1 5471 5960 -340 930 102 36 15 chr5 145808494 145808631 -53821519 - MSTB LTR MaLR 0 426 287 506 139 111 19 chr5 145808646 145808745 -53821405 + FRAM SINE Alu 53 164 -148 180 0 0 0 chr5 145808745 145808765 -53821385 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 7217 185 12 15 chr5 145808813 145810118 -53820032 - MSTB-int LTR MaLR -349 1302 1 2550 150 30 7 chr5 145810126 145810532 -53819618 - MSTB LTR MaLR -11 415 1 1991 135 25 3 chr5 145810536 145810862 -53819288 + L1MA6 LINE L1 5968 6300 0 971 205 14 14 chr5 145810885 145811095 -53819055 + L1M4 LINE L1 4006 4215 -1931 2411 86 0 10 chr5 145811116 145811429 -53818721 - AluY SINE Alu -1 310 1 1684 156 50 7 chr5 145811544 145811826 -53818324 - AluJo SINE Alu -12 300 7 817 323 42 26 chr5 145811907 145812291 -53817859 + L1MB4 LINE L1 395 784 -5758 189 74 0 0 chr5 145812322 145812349 -53817801 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 484 211 23 18 chr5 145812380 145812412 -53817738 + CT-rich Low_complexity Low_complexity 3 33 -141 1938 181 0 0 chr5 145812412 145812711 -53817439 - AluJo SINE Alu -13 299 1 484 211 23 18 chr5 145812711 145812849 -53817301 + CT-rich Low_complexity Low_complexity 33 174 0 2384 104 0 0 chr5 145812849 145813158 -53816992 - AluSc SINE Alu 0 309 1 1247 211 61 21 chr5 145813168 145813448 -53816702 - AluJo SINE Alu -21 291 1 211 231 23 8 chr5 145813448 145813568 -53816582 + CT-rich Low_complexity Low_complexity 8 415 0 1346 219 44 31 chr5 145813604 145813638 -53816512 + L1MB4 LINE L1 816 848 -5694 2135 114 24 7 chr5 145813638 145813936 -53816214 + AluSx SINE Alu 1 303 -9 1346 219 44 31 chr5 145813936 145814261 -53815889 + L1MB4 LINE L1 848 1180 -5362 1530 141 5 0 chr5 145814277 145814497 -53815653 + AluSq SINE Alu 1 221 -92 3296 244 47 22 chr5 145814499 145815764 -53814386 + L1MB4 LINE L1 1353 2798 -4027 1509 138 5 0 chr5 145815764 145815982 -53814168 + AluSg/x SINE Alu 81 299 -11 3296 244 47 22 chr5 145815982 145816142 -53814008 + L1MB4 LINE L1 2798 2952 -3873 366 221 63 0 chr5 145816168 145816263 -53813887 + L1MB4 LINE L1 3183 3283 -3361 * 5338 133 20 26 chr5 145816253 145817249 -53812901 + L1PB3 LINE L1 4677 5640 -516 2081 128 3 13 chr5 145817249 145817547 -53812603 - AluSx SINE Alu -17 295 1 5338 133 20 26 chr5 145817547 145818055 -53812095 + L1PB3 LINE L1 5640 6150 -6 1524 212 35 0 chr5 145818055 145818338 -53811812 + AluJb SINE Alu 1 293 -19 22 0 0 0 chr5 145818370 145818392 -53811758 + AT_rich Low_complexity Low_complexity 1 22 0 203 240 20 0 chr5 145818395 145818445 -53811705 + (CA)n Simple_repeat Simple_repeat 2 52 0 4529 214 85 29 chr5 145818480 145818575 -53811575 + L1MB4 LINE L1 3267 3355 -3289 2328 104 3 0 chr5 145818575 145818872 -53811278 - AluSp SINE Alu -15 298 1 4529 214 85 29 chr5 145818872 145818887 -53811263 + L1MB4 LINE L1 3355 3368 -3276 2421 95 0 3 chr5 145818887 145819191 -53810959 - AluSx SINE Alu -9 303 1 4529 214 85 29 chr5 145819191 145820436 -53809714 + L1MB4 LINE L1 3368 4699 -1945 14253 115 38 5 chr5 145820437 145822546 -53807604 - Tigger1 DNA MER2_type -2 2416 239 1909 144 169 11 chr5 145822547 145822895 -53807255 - MER4A LTR ERV1 -1 663 261 558 146 31 10 chr5 145822895 145822991 -53807159 - MER4A LTR ERV1 -566 98 1 * 1612 137 0 8 chr5 145822991 145823235 -53806915 - Tigger1 DNA MER2_type -2176 242 1 5119 155 20 74 chr5 145823235 145824277 -53805873 + L1MB4 LINE L1 4697 5794 -884 1809 153 42 11 chr5 145824277 145824564 -53805586 + AluJb SINE Alu 1 296 -16 5119 155 20 74 chr5 145824564 145824871 -53805279 + L1MB4 LINE L1 5794 6116 -562 2150 134 0 3 chr5 145824871 145825177 -53804973 + AluSx SINE Alu 1 305 -7 5119 155 20 74 chr5 145825177 145825883 -53804267 + L1MB4 LINE L1 6116 6642 -36 353 207 201 30 chr5 145825978 145826142 -53804008 + L1MC/D LINE L1 3267 3458 -2688 2307 107 0 0 chr5 145826273 145826571 -53803579 + AluSx SINE Alu 3 300 -12 611 291 80 12 chr5 145826599 145827026 -53803124 + L1MC/D LINE L1 5215 5687 -771 433 284 173 0 chr5 145827039 145827264 -53802886 + L2 LINE L2 2693 2956 -358 580 179 0 15 chr5 145827339 145827473 -53802677 + CT-rich Low_complexity Low_complexity 1 132 0 1837 144 138 6 chr5 145827474 145827829 -53802321 - L1MA4 LINE L1 -15 6285 5884 361 314 7 36 chr5 145827966 145828106 -53802044 + L2 LINE L2 3137 3272 0 183 156 0 0 chr5 145828546 145828578 -53801572 - L2 LINE L2 -23 3249 3218 469 206 206 12 chr5 145829071 145829231 -53800919 - MIR SINE MIR -55 207 17 42673 56 6 8 chr5 145830353 145836525 -53793625 - L1PA5 LINE L1 -2 6152 4 2407 61 10 10 chr5 145838983 145839299 -53790851 + AluY SINE Alu 1 316 0 336 254 16 48 chr5 145839598 145839724 -53790426 + MIR SINE MIR 59 180 -82 247 308 44 0 chr5 145840247 145840338 -53789812 - L2 LINE L2 -21 3292 3198 225 191 252 0 chr5 145843293 145843408 -53786742 + MIR3 SINE MIR 5 148 -60 275 253 30 20 chr5 145843783 145843882 -53786268 - MIR SINE MIR -143 119 20 274 330 18 9 chr5 145845195 145845304 -53784846 - L2 LINE L2 -29 3243 3134 2495 156 31 7 chr5 145846304 145846720 -53783430 - MSTB LTR MaLR 0 426 1 820 142 15 22 chr5 145848651 145848785 -53781365 + FLAM_A SINE Alu 1 133 0 453 286 16 8 chr5 145848960 145849086 -53781064 - MIR SINE MIR -113 149 23 234 302 181 0 chr5 145849092 145849208 -53780942 - MIR SINE MIR -80 182 46 475 310 124 48 chr5 145849931 145850021 -53780129 + L1ME4a LINE L1 5403 5485 -636 2310 83 0 19 chr5 145850021 145850334 -53779816 + AluSg SINE Alu 1 307 -3 475 310 124 48 chr5 145850334 145850866 -53779284 + L1ME4a LINE L1 5485 6072 -49 249 291 117 28 chr5 145850944 145851191 -53778959 - L2 LINE L2 -337 2977 2709 185 333 8 43 chr5 145851297 145851414 -53778736 + L2 LINE L2 2948 3060 -212 456 216 144 16 chr5 145851708 145851833 -53778317 - MIR SINE MIR -112 150 10 198 171 0 0 chr5 145852764 145852805 -53777345 + (TG)n Simple_repeat Simple_repeat 1 41 0 194 0 39 0 chr5 145853639 145853665 -53776485 + (TG)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr5 145854059 145854087 -53776063 + AT_rich Low_complexity Low_complexity 1 28 0 4881 117 34 34 chr5 145854644 145855241 -53774909 - L1MB3 LINE L1 -7 6176 5577 2109 114 6 19 chr5 145855241 145855557 -53774593 - AluSx SINE Alu 0 312 1 4881 117 34 34 chr5 145855557 145855843 -53774307 - L1MB3 LINE L1 -605 5578 5293 1995 86 0 22 chr5 145856012 145856290 -53773860 - AluY SINE Alu -6 305 34 294 100 20 0 chr5 145856294 145856344 -53773806 - L2 LINE L2 0 3313 3263 278 233 142 50 chr5 145856463 145856583 -53773567 + MIR SINE MIR 25 155 -107 635 278 22 22 chr5 145857307 145857487 -53772663 + MIR SINE MIR 4 183 -79 252 266 256 30 chr5 145858175 145858374 -53771776 + L2 LINE L2 3026 3269 -3 264 172 183 43 chr5 145859156 145859249 -53770901 + MIR SINE MIR 72 177 -85 225 108 0 0 chr5 145861007 145861044 -53769106 + (T)n Simple_repeat Simple_repeat 1 37 0 22 103 0 0 chr5 145861157 145861235 -53768915 + GC_rich Low_complexity Low_complexity 1 78 0 26 64 0 0 chr5 145866349 145866396 -53763754 + GC_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr5 145866489 145866517 -53763633 + GC_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr5 145867390 145867432 -53762718 + AT_rich Low_complexity Low_complexity 1 42 0 197 33 33 0 chr5 145869615 145869645 -53760505 + (GA)n Simple_repeat Simple_repeat 2 32 0 224 301 57 65 chr5 145869870 145869993 -53760157 - MIR3 SINE MIR -42 166 45 186 315 226 11 chr5 145871545 145871638 -53758512 + MIR SINE MIR 38 149 -62 744 233 128 0 chr5 145872203 145872422 -53757728 - MIR SINE MIR 0 262 16 739 142 0 0 chr5 145872670 145872783 -53757367 + AluSc SINE Alu 192 304 -5 6155 38 0 0 chr5 145873579 145874295 -53755855 - L1PA4 LINE L1 -3 6152 5437 2219 261 38 3 chr5 145874386 145874972 -53755178 - HAL1 LINE L1 -1808 699 94 621 214 14 14 chr5 145876930 145877075 -53753075 + MIR SINE MIR 49 193 -69 194 258 75 43 chr5 145879674 145879767 -53750383 - MIR SINE MIR -107 155 60 492 279 0 0 chr5 145880230 145880402 -53749748 + (TG)n Simple_repeat Simple_repeat 1 172 0 194 278 0 0 chr5 145881050 145881104 -53749046 + MIR SINE MIR 209 262 0 22 0 0 0 chr5 145881678 145881700 -53748450 + GC_rich Low_complexity Low_complexity 1 22 0 481 302 127 31 chr5 145883427 145883718 -53746432 - MLT1L LTR MaLR -81 534 216 288 331 87 85 chr5 145883871 145884249 -53745901 + MLT1K LTR MaLR 192 570 -18 201 200 213 25 chr5 145884565 145884645 -53745505 - MIR SINE MIR 0 262 168 234 289 78 56 chr5 145884871 145884961 -53745189 + L2 LINE L2 3180 3271 -1 * 394 310 47 31 chr5 145884947 145885148 -53745002 - MIR SINE MIR -56 206 3 520 285 64 12 chr5 145885271 145885443 -53744707 - MIR SINE MIR -58 204 24 222 91 0 0 chr5 145885695 145885728 -53744422 + (TG)n Simple_repeat Simple_repeat 2 34 0 1392 159 11 33 chr5 145886037 145886307 -53743843 + AluSx SINE Alu 30 293 -19 926 242 26 26 chr5 145887094 145887325 -53742825 - MIR SINE MIR -12 250 20 460 226 20 0 chr5 145887343 145887445 -53742705 + MER3 DNA MER1_type 45 148 -61 1163 266 71 9 chr5 145887779 145888117 -53742033 + MLT1J LTR MaLR 1 359 -152 291 164 147 69 chr5 145888353 145888469 -53741681 - MIR SINE MIR -92 170 46 183 362 0 14 chr5 145889468 145889537 -53740613 - MIR3 SINE MIR -21 187 120 201 336 111 48 chr5 145889548 145889756 -53740394 - L2 LINE L2 -18 3254 3034 191 250 0 0 chr5 145890328 145890368 -53739782 - L2 LINE L2 -107 3165 3126 230 338 60 15 chr5 145890713 145890846 -53739304 - MIR SINE MIR -17 245 107 1459 208 123 14 chr5 145891031 145891445 -53738705 - MLT1C LTR MaLR -2 465 7 360 304 127 6 chr5 145892146 145892304 -53737846 + MIR SINE MIR 7 183 -79 778 204 25 49 chr5 145892907 145892963 -53737187 - MIR SINE MIR -1 261 205 336 48 0 0 chr5 145892963 145893005 -53737145 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2153 89 0 3 chr5 145893008 145893290 -53736860 - AluSq SINE Alu -32 281 1 778 204 25 49 chr5 145893290 145893452 -53736698 - MIR SINE MIR -59 203 40 297 236 41 73 chr5 145894179 145894302 -53735848 - MIR SINE MIR -91 171 53 1707 284 118 6 chr5 145897704 145898552 -53731598 + L2 LINE L2 2365 3312 -1 3635 174 20 22 chr5 145899404 145899848 -53730302 + L1MB7 LINE L1 5458 5901 -283 2246 94 0 0 chr5 145899848 145900146 -53730004 + AluSx SINE Alu 1 298 -14 3635 174 20 22 chr5 145900146 145900413 -53729737 + L1MB7 LINE L1 5901 6167 -17 471 277 182 4 chr5 145900415 145900657 -53729493 + L1ME LINE L1 3687 3971 -2175 1295 228 90 92 chr5 145900667 145901218 -53728932 - MLT1E LTR MaLR -53 540 7 2044 197 24 106 chr5 145901219 145902002 -53728148 + L1ME LINE L1 3995 4713 -1433 11047 192 49 11 chr5 145902005 145905180 -53724970 + L1MA9 LINE L1 2629 5924 -388 446 200 63 0 chr5 145905210 145905305 -53724845 + L1MA9 LINE L1 6174 6274 -38 712 219 67 24 chr5 145905323 145905533 -53724617 + L1ME LINE L1 4703 4921 -1225 440 263 73 11 chr5 145905704 145905883 -53724267 + L1ME LINE L1 5496 5685 -479 5383 237 22 16 chr5 145905888 145906247 -53723903 + L1MB5 LINE L1 3137 3492 -2654 2726 136 26 7 chr5 145906247 145906665 -53723485 - MSTB LTR MaLR 0 426 1 5383 237 22 16 chr5 145906665 145907761 -53722389 + L1MB5 LINE L1 3492 4601 -1545 720 194 89 35 chr5 145907962 145908213 -53721937 - MLT1D LTR MaLR -175 330 5 1626 223 113 26 chr5 145908218 145908705 -53721445 + L1MB5 LINE L1 5647 6174 0 643 205 215 15 chr5 145908823 145909028 -53721122 + L1MC4 LINE L1 6458 6703 -1339 1839 169 56 0 chr5 145909035 145909349 -53720801 - MER7A DNA MER2_type -4 342 12 189 0 0 0 chr5 145909349 145909370 -53720780 + (CA)n Simple_repeat Simple_repeat 1 21 0 2105 214 53 12 chr5 145909382 145909872 -53720278 + L1MC4 LINE L1 6700 7209 -833 345 317 43 43 chr5 145911404 145911565 -53718585 + MIR3 SINE MIR 21 181 -27 302 308 0 11 chr5 145911674 145911765 -53718385 - L1MEc LINE L1 -4915 2223 2134 31 0 0 0 chr5 145911765 145911796 -53718354 + AT_rich Low_complexity Low_complexity 1 31 0 446 264 57 19 chr5 145911800 145911959 -53718191 - L1MEc LINE L1 -4864 2083 1919 288 242 128 128 chr5 145911985 145912274 -53717876 - MLT1I LTR MaLR -64 345 57 279 239 57 0 chr5 145913442 145913530 -53716620 - L1MEc LINE L1 -5982 965 873 379 314 88 20 chr5 145913804 145914005 -53716145 - MIR SINE MIR -22 240 16 2241 92 0 10 chr5 145915021 145915325 -53714825 + AluSq SINE Alu 3 303 -10 471 293 189 11 chr5 145915341 145915532 -53714618 + MIR SINE MIR 28 252 -10 199 399 14 0 chr5 145916625 145916768 -53713382 - MIR SINE MIR -70 192 48 2214 173 60 30 chr5 145917326 145917794 -53712356 + MLT1D LTR MaLR 24 505 0 186 242 58 75 chr5 145918682 145918802 -53711348 + MIR SINE MIR 19 136 -72 383 337 12 47 chr5 145919415 145919587 -53710563 + MIR SINE MIR 11 176 -86 451 234 134 100 chr5 145919602 145919841 -53710309 - MIR SINE MIR -12 250 4 653 100 0 0 chr5 145920385 145920475 -53709675 + MLT1D LTR MaLR 416 505 0 518 191 51 10 chr5 145920475 145920608 -53709542 - L1MC/D LINE L1 -519 5647 5514 294 248 86 26 chr5 145920586 145920703 -53709447 - L1MEc LINE L1 -6723 136 13 * 560 232 76 45 chr5 145920799 145921018 -53709132 + MIR SINE MIR 32 253 -9 430 233 0 11 chr5 145921361 145921451 -53708699 - MIR SINE MIR -57 151 63 457 244 103 31 chr5 145921943 145922104 -53708046 - MIR SINE MIR -35 173 14 371 229 83 0 chr5 145923178 145923274 -53706876 - MIR SINE MIR -111 151 48 216 116 0 47 chr5 145923761 145923804 -53706346 + (GGGA)n Simple_repeat Simple_repeat 2 42 0 263 359 94 0 chr5 145924282 145924388 -53705762 - MIR SINE MIR -109 153 38 528 93 0 0 chr5 145924880 145924955 -53705195 + (TGGA)n Simple_repeat Simple_repeat 2 76 0 252 111 0 0 chr5 145925504 145925540 -53704610 - MIR SINE MIR -62 146 111 857 184 76 27 chr5 145926713 145926898 -53703252 + MIR SINE MIR 59 252 -10 286 312 106 41 chr5 145927798 145928016 -53702134 + MIR SINE MIR 20 251 -11 2130 225 136 19 chr5 145928629 145928839 -53701311 - L1ME1 LINE L1 -5 6161 5977 1455 144 131 23 chr5 145928839 145929145 -53701005 - MER44D DNA MER2_type 0 609 1 2130 225 136 19 chr5 145929145 145929552 -53700598 - L1ME1 LINE L1 -189 5977 5472 5274 247 64 34 chr5 145929581 145930081 -53700069 - L1ME1 LINE L1 -5 6161 5678 216 0 0 0 chr5 145930081 145930105 -53700045 + (CTAAA)n Simple_repeat Simple_repeat 2 25 0 5274 247 64 34 chr5 145930105 145931261 -53698889 - L1ME1 LINE L1 -488 5678 4364 2256 81 0 43 chr5 145931261 145931584 -53698566 - AluSq SINE Alu -4 309 1 5274 247 64 34 chr5 145931584 145932524 -53697626 - L1ME1 LINE L1 -1802 4364 3454 1334 218 29 5 chr5 145932528 145932889 -53697261 + L1MC/D LINE L1 5080 5453 -743 210 252 207 59 chr5 145933190 145933277 -53696873 - MIR SINE MIR -48 214 141 1426 176 61 67 chr5 145933277 145933653 -53696497 - MLT1A2 LTR MaLR 0 374 1 210 252 207 59 chr5 145933653 145933700 -53696450 - MIR SINE MIR -121 141 60 206 232 196 14 chr5 145934753 145934910 -53695240 + MIR SINE MIR 16 231 -31 1401 237 59 9 chr5 145934977 145935443 -53694707 + L1M4 LINE L1 3347 3860 -2286 4728 223 61 52 chr5 145935573 145936975 -53693175 + L1MC4a LINE L1 6395 7808 0 1082 223 95 52 chr5 145937061 145937716 -53692434 + L1MD2 LINE L1 1906 2551 -3664 825 230 74 98 chr5 145937719 145938288 -53691862 + L1MD2 LINE L1 2984 3538 -2677 424 277 28 59 chr5 145938351 145938442 -53691708 + L1MD2 LINE L1 3535 3627 -2588 1016 153 0 23 chr5 145938442 145938619 -53691531 + L1MB7 LINE L1 5994 6166 -18 424 277 28 59 chr5 145938619 145938780 -53691370 + L1MD2 LINE L1 3627 3779 -2436 * 3170 204 34 50 chr5 145938762 145939589 -53690561 + L1MD2 LINE L1 4527 5340 -875 327 146 0 0 chr5 145939980 145940035 -53690115 + (CCCCCA)n Simple_repeat Simple_repeat 2 56 0 183 200 57 0 chr5 145940828 145940863 -53689287 - L2 LINE L2 -7 3265 3229 252 0 0 0 chr5 145943140 145943168 -53686982 + (CGAA)n Simple_repeat Simple_repeat 1 28 0 22 35 0 0 chr5 145943888 145943917 -53686233 + GC_rich Low_complexity Low_complexity 1 29 0 488 309 13 0 chr5 145945750 145945899 -53684251 + MIR SINE MIR 20 170 -92 205 270 26 77 chr5 145946742 145946824 -53683326 + L2 LINE L2 3134 3211 -61 348 356 43 43 chr5 145947767 145948070 -53682080 - L2 LINE L2 -371 2943 2641 457 298 104 48 chr5 145949520 145949836 -53680314 - L2 LINE L2 -2 3270 2937 180 344 159 6 chr5 145950369 145950526 -53679624 - MIR SINE MIR -8 254 74 * 221 342 50 62 chr5 145950524 145950685 -53679465 - MIR SINE MIR 0 262 104 219 220 20 0 chr5 145952076 145952126 -53678024 + MIR SINE MIR 95 145 -63 309 273 61 50 chr5 145952205 145952403 -53677747 - L2 LINE L2 -219 3053 2854 1765 245 50 5 chr5 145953660 145954096 -53676054 + L1MD2 LINE L1 5756 6211 -217 305 161 189 105 chr5 145954097 145954240 -53675910 + L1MD2 LINE L1 6264 6418 -10 332 264 108 16 chr5 145955666 145955795 -53674355 - MIR SINE MIR -101 161 21 271 288 150 46 chr5 145956744 145956897 -53673253 - MIR3 SINE MIR -2 206 38 181 385 44 11 chr5 145956984 145957075 -53673075 - MIR SINE MIR -71 191 98 234 254 60 30 chr5 145957517 145957584 -53672566 + L2 LINE L2 3200 3268 -4 220 343 49 10 chr5 145957926 145958028 -53672122 - MIR SINE MIR -59 149 44 804 259 67 28 chr5 145958953 145959312 -53670838 + L1ME4a LINE L1 5561 5933 -188 885 269 19 0 chr5 145960938 145961150 -53669000 - MIR SINE MIR -11 251 36 2351 166 81 5 chr5 145961922 145962355 -53667795 - MLT1C LTR MaLR -1 466 1 276 30 0 0 chr5 145963641 145963674 -53666476 + (TG)n Simple_repeat Simple_repeat 2 34 0 367 242 109 23 chr5 145963701 145963829 -53666321 - L2 LINE L2 0 3272 3134 2299 197 12 19 chr5 145964545 145965027 -53665123 - MLT1D LTR MaLR -1 504 26 2047 133 10 3 chr5 145965418 145965726 -53664424 - AluSx SINE Alu -2 310 1 1116 152 83 0 chr5 145966009 145966226 -53663924 - MER96B DNA MER1_type? -182 235 1 280 265 33 86 chr5 145967015 145967166 -53662984 + MIR3 SINE MIR 19 161 -47 200 250 30 30 chr5 145969192 145969292 -53660858 + MIR SINE MIR 31 130 -78 22 0 0 0 chr5 145969966 145969988 -53660162 + AT_rich Low_complexity Low_complexity 1 22 0 573 255 130 0 chr5 145970403 145970564 -53659586 + MIR SINE MIR 1 182 -80 2174 102 0 0 chr5 145972425 145972752 -53657398 + AluSq SINE Alu 1 327 0 21 0 0 0 chr5 145974737 145974758 -53655392 + AT_rich Low_complexity Low_complexity 1 21 0 487 301 69 0 chr5 145974905 145975121 -53655029 - MIR SINE MIR 0 262 32 243 233 165 73 chr5 145975902 145976108 -53654042 + L2 LINE L2 2850 3074 -198 434 306 34 0 chr5 145976243 145976390 -53653760 - MIR SINE MIR 0 262 111 262 340 10 10 chr5 145976587 145976687 -53653463 + L2 LINE L2 3189 3288 -25 378 275 28 0 chr5 145978875 145978984 -53651166 + L2 LINE L2 3184 3295 -18 617 71 12 0 chr5 145979382 145979466 -53650684 - AluY SINE Alu -10 301 217 349 312 123 32 chr5 145981425 145981540 -53648610 - L1ME4a LINE L1 -2 6119 6016 1781 107 25 94 chr5 145981540 145981858 -53648292 - AluSx SINE Alu -15 297 2 349 312 123 32 chr5 145981858 145982138 -53648012 - L1ME4a LINE L1 -105 6016 5617 312 270 100 119 chr5 145982143 145982475 -53647675 - L1ME4a LINE L1 -9 6112 5775 1944 112 54 0 chr5 145982475 145982753 -53647397 - AluSx SINE Alu -19 293 1 312 270 100 119 chr5 145982753 145983112 -53647038 - L1ME4a LINE L1 -346 5775 5395 464 301 146 14 chr5 145983520 145983739 -53646411 - MIR SINE MIR -13 249 2 1628 96 12 12 chr5 145984350 145984599 -53645551 - MSTA LTR MaLR -1 427 179 286 281 25 8 chr5 145984607 145984728 -53645422 - HAL1 LINE L1 -93 2414 2292 1108 68 0 0 chr5 145984730 145984863 -53645287 + AluSq/x SINE Alu 1 133 -180 2821 249 69 28 chr5 145984871 145985712 -53644438 - HAL1 LINE L1 -203 2304 1412 1935 140 76 31 chr5 145985712 145986069 -53644081 - THE1C LTR MaLR -2 373 1 2821 249 69 28 chr5 145986069 145986258 -53643892 - HAL1 LINE L1 -1095 1412 1232 230 203 102 112 chr5 145986324 145986511 -53643639 + MLT1H LTR MaLR 119 303 -246 799 233 160 14 chr5 145986614 145986958 -53643192 - HAL1 LINE L1 -1270 1237 844 6366 22 0 0 chr5 145986977 145987693 -53642457 - L1PA3 LINE L1 -3 6152 5437 2219 261 38 3 chr5 145987784 145988370 -53641780 - HAL1 LINE L1 -1808 699 94 681 303 117 12 chr5 145988606 145989099 -53641051 - L1ME4a LINE L1 -202 5919 5370 180 0 0 0 chr5 145989517 145989537 -53640613 + (A)n Simple_repeat Simple_repeat 1 20 0 180 323 20 40 chr5 145992236 145992335 -53637815 - L2 LINE L2 -219 3053 2957 5612 132 26 0 chr5 145992554 145993466 -53636684 - L1MA5 LINE L1 -2 6298 5363 1187 173 57 25 chr5 145993462 145993609 -53636541 + L1 LINE L1 5093 5234 -912 * 2933 65 19 0 chr5 145993609 145993976 -53636174 + THE1C LTR MaLR 1 374 -1 1187 173 57 25 chr5 145993976 145994111 -53636039 + L1 LINE L1 5234 5384 -762 237 329 13 0 chr5 145995834 145995913 -53634237 - MIR3 SINE MIR -23 185 106 530 268 42 12 chr5 145995929 145996097 -53634053 + MIR SINE MIR 22 194 -68 186 71 0 0 chr5 145997097 145997125 -53633025 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 5360 65 22 23 chr5 145997125 145997245 -53632905 - L1PB1 LINE L1 -11 6140 6021 2119 118 3 0 chr5 145997245 145997541 -53632609 - AluSp SINE Alu -14 299 3 5360 65 22 23 chr5 145997541 145997786 -53632364 - L1PB1 LINE L1 -130 6021 5777 237 33 0 0 chr5 145997786 145997816 -53632334 + (TG)n Simple_repeat Simple_repeat 2 31 0 5360 65 22 23 chr5 145997816 145998218 -53631932 - L1PB1 LINE L1 -374 5777 5373 730 257 170 0 chr5 145998232 145998438 -53631712 + MIR SINE MIR 7 247 -15 212 330 22 0 chr5 145998454 145998545 -53631605 + L2 LINE L2 2217 2309 -1005 508 265 68 0 chr5 146000634 146000766 -53629384 + MIR SINE MIR 12 152 -110 181 229 0 0 chr5 146000786 146000821 -53629329 + L2 LINE L2 3217 3251 -21 5702 117 9 0 chr5 146001180 146002043 -53628107 + L1PB3 LINE L1 5284 6154 0 317 209 70 108 chr5 146002236 146002365 -53627785 - HAL1b LINE L1 0 1348 1225 3136 181 18 20 chr5 146002600 146003040 -53627110 - MER44D DNA MER2_type -1882 605 110 1705 146 4 11 chr5 146003040 146003320 -53626830 - AluSx SINE Alu -11 301 24 3136 181 18 20 chr5 146003320 146003430 -53626720 - MER44D DNA MER2_type -2377 110 1 245 274 26 35 chr5 146003520 146003633 -53626517 - L1ME LINE L1 -338 5783 5672 312 253 291 13 chr5 146003707 146003865 -53626285 - L1ME LINE L1 -2283 5525 5324 697 120 154 17 chr5 146003960 146004077 -53626073 + FLAM_C SINE Alu 1 133 0 269 259 111 19 chr5 146004438 146004546 -53625604 - MIR3 SINE MIR -3 205 88 300 111 0 0 chr5 146004999 146005044 -53625106 + (TG)n Simple_repeat Simple_repeat 2 46 0 193 263 11 74 chr5 146005251 146005346 -53624804 + L2 LINE L2 2992 3080 -192 189 219 0 0 chr5 146005527 146005568 -53624582 + MIR SINE MIR 215 255 -7 242 283 0 17 chr5 146006527 146006587 -53623563 + MIR SINE MIR 20 78 -184 262 233 83 0 chr5 146006773 146006833 -53623317 - L2 LINE L2 -5 3308 3244 455 291 0 16 chr5 146006909 146007036 -53623114 - L2 LINE L2 -205 3067 2943 276 323 137 0 chr5 146007143 146007369 -53622781 - L2 LINE L2 -636 2678 2422 2134 98 7 3 chr5 146008383 146008678 -53621472 - AluY SINE Alu -15 296 1 614 229 13 0 chr5 146008755 146008908 -53621242 - MER103 DNA DNA -1 165 11 725 179 6 42 chr5 146009521 146009689 -53620461 + MER5B DNA MER1_type 5 166 -12 579 236 133 20 chr5 146009913 146010108 -53620042 - MIR SINE MIR -4 258 42 1109 181 55 0 chr5 146010301 146010500 -53619650 - MER63A DNA MER1_type 0 210 1 278 211 11 4 chr5 146012836 146012928 -53617222 - MIR SINE MIR -107 155 32 260 203 27 54 chr5 146013575 146013649 -53616501 + MIR SINE MIR 65 136 -72 292 288 126 0 chr5 146013696 146013807 -53616343 + MIR SINE MIR 131 255 -7 296 313 26 17 chr5 146014008 146014123 -53616027 + MIR3 SINE MIR 4 119 -89 231 303 48 61 chr5 146014245 146014410 -53615740 - MIR3 SINE MIR -45 163 1 848 256 52 0 chr5 146015927 146016157 -53613993 + MIR SINE MIR 20 261 -1 2177 53 0 0 chr5 146017019 146017281 -53612869 - AluY SINE Alu -11 300 39 254 225 169 0 chr5 146018651 146018722 -53611428 + MIR SINE MIR 65 147 -115 194 159 45 0 chr5 146019200 146019244 -53610906 + CT-rich Low_complexity Low_complexity 4 49 0 2313 46 0 11 chr5 146020724 146021031 -53609119 - AluY SINE Alu 0 304 1 216 305 0 0 chr5 146021176 146021235 -53608915 - L2 LINE L2 -8 3264 3206 609 262 112 14 chr5 146021441 146021655 -53608495 - MIR SINE MIR -21 241 7 875 224 125 0 chr5 146023689 146023921 -53606229 + MIR SINE MIR 2 262 0 2025 138 0 0 chr5 146023973 146024269 -53605881 + AluSx SINE Alu 1 296 -16 352 262 184 12 chr5 146024349 146024517 -53605633 + MIR SINE MIR 65 261 -1 268 234 139 147 chr5 146025602 146025627 -53604523 - MIR SINE MIR 0 262 238 2254 106 3 0 chr5 146025627 146025930 -53604220 + AluSq SINE Alu 1 304 -9 198 0 0 0 chr5 146025930 146025952 -53604198 + (TA)n Simple_repeat Simple_repeat 2 23 0 268 234 139 147 chr5 146025952 146026177 -53603973 - MIR SINE MIR -22 240 13 682 318 75 17 chr5 146027243 146027589 -53602561 - MLT1K LTR MaLR -73 515 150 382 194 182 0 chr5 146027973 146028085 -53602065 - MIR SINE MIR -72 136 21 699 228 61 17 chr5 146029156 146029336 -53600814 + MIR SINE MIR 47 234 -28 275 281 169 11 chr5 146029858 146029947 -53600203 - MIR SINE MIR -114 148 46 324 343 68 20 chr5 146030486 146030632 -53599518 + L2 LINE L2 3122 3274 -39 285 299 201 0 chr5 146031470 146031634 -53598516 - MIR SINE MIR -12 250 54 245 282 30 69 chr5 146032563 146032694 -53597456 - HAL1 LINE L1 -6 2501 2376 1237 276 47 39 chr5 146032809 146032931 -53597219 - L1MC4a LINE L1 -1921 5887 5767 1768 117 0 8 chr5 146032931 146033195 -53596955 - AluSg SINE Alu -7 303 42 1237 276 47 39 chr5 146033195 146033557 -53596593 - L1MC4a LINE L1 -2041 5767 5399 258 310 69 0 chr5 146034783 146034870 -53595280 + L2 LINE L2 3220 3312 -1 449 285 72 6 chr5 146037043 146037205 -53592945 + MLT1I LTR MaLR 15 182 -253 190 143 0 0 chr5 146037532 146037567 -53592583 + L2 LINE L2 3277 3311 -2 192 40 0 0 chr5 146037862 146037887 -53592263 + (TG)n Simple_repeat Simple_repeat 1 25 0 * 204 158 0 0 chr5 146037881 146037919 -53592231 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 185 306 71 0 chr5 146038129 146038214 -53591936 + L2 LINE L2 2966 3056 -257 325 315 65 11 chr5 146038417 146038601 -53591549 + L3 LINE CR1 1232 1425 -152 405 296 87 40 chr5 146040870 146041123 -53589027 + L2 LINE L2 3049 3313 0 326 346 45 0 chr5 146041141 146041274 -53588876 - MIR SINE MIR -74 188 50 455 255 65 13 chr5 146042611 146042764 -53587386 - MIR SINE MIR -66 196 36 902 160 66 22 chr5 146044684 146044865 -53585285 - MER5A DNA MER1_type 0 189 1 233 208 255 1 chr5 146045682 146045777 -53584373 + MIR SINE MIR 37 153 -62 232 240 80 13 chr5 146046033 146046108 -53584042 + MIR SINE MIR 93 172 -90 183 314 57 0 chr5 146046114 146046184 -53583966 - L2 LINE L2 -17 3255 3182 645 266 146 37 chr5 146046553 146046956 -53583194 - HAL1 LINE L1 -131 2376 1930 1100 260 130 13 chr5 146046960 146047183 -53582967 - HAL1 LINE L1 -623 1884 1688 1671 179 13 13 chr5 146047183 146047491 -53582659 - AluJo SINE Alu -4 308 1 1100 260 130 13 chr5 146047491 146047652 -53582498 - HAL1 LINE L1 -819 1688 1455 * 5696 64 14 15 chr5 146047640 146048437 -53581713 - L1PA8 LINE L1 -1 6171 5376 593 313 106 28 chr5 146048466 146048750 -53581400 - HAL1 LINE L1 -1055 1452 1147 4829 189 108 39 chr5 146048785 146048960 -53581190 - Charlie1a DNA MER1_type -1320 1441 1280 2095 128 20 10 chr5 146048960 146049258 -53580892 + AluSx SINE Alu 1 301 -11 4829 189 108 39 chr5 146049258 146050430 -53579720 - Charlie1a DNA MER1_type -1481 1280 1 1132 288 111 42 chr5 146050430 146051439 -53578711 - HAL1 LINE L1 -1364 1143 65 2922 82 0 0 chr5 146051443 146051807 -53578343 - THE1B LTR MaLR 0 364 1 1791 218 100 60 chr5 146051811 146052381 -53577769 + MLT1E LTR MaLR 1 593 0 228 269 39 58 chr5 146052879 146052983 -53577167 + MIR SINE MIR 33 134 -128 457 318 40 20 chr5 146052986 146053134 -53577016 - L2 LINE L2 0 3272 3122 350 250 128 14 chr5 146053145 146053293 -53576857 + Charlie8 DNA MER1_type 1 165 -2252 3758 38 0 0 chr5 146055858 146056305 -53573845 + L1PA4 LINE L1 5706 6152 -3 733 142 0 0 chr5 146057101 146057214 -53572936 - AluSc SINE Alu -5 304 192 795 228 128 0 chr5 146057462 146057681 -53572469 + MIR SINE MIR 16 262 0 193 240 313 21 chr5 146058250 146058346 -53571804 - MIR SINE MIR -62 146 23 226 293 57 65 chr5 146059891 146060014 -53570136 + MIR3 SINE MIR 45 166 -42 197 33 33 0 chr5 146060239 146060269 -53569881 + (TC)n Simple_repeat Simple_repeat 2 32 0 21 71 0 0 chr5 146062452 146062494 -53567656 + AT_rich Low_complexity Low_complexity 1 42 0 189 222 0 0 chr5 146063097 146063133 -53567017 + L2 LINE L2 3025 3060 -212 339 305 24 85 chr5 146063226 146063390 -53566760 + L2 LINE L2 3117 3270 -2 484 337 38 5 chr5 146063533 146063717 -53566433 + MIR SINE MIR 10 199 -63 1027 253 66 138 chr5 146064124 146064866 -53565284 - MLT1D-int LTR MaLR -134 1237 549 208 148 37 19 chr5 146064866 146064920 -53565230 + A-rich Low_complexity Low_complexity 3 57 0 2089 108 44 7 chr5 146064948 146065245 -53564905 - AluSx SINE Alu -4 308 1 351 238 12 8 chr5 146066108 146066284 -53563866 - MLT1D-int LTR MaLR -485 886 674 239 192 39 0 chr5 146066415 146066467 -53563683 - MLT1D-int LTR MaLR -769 602 549 208 148 37 19 chr5 146066467 146066521 -53563629 + A-rich Low_complexity Low_complexity 3 57 0 2358 102 3 0 chr5 146066550 146066855 -53563295 - AluSg SINE Alu -4 306 1 1972 222 35 4 chr5 146066855 146067362 -53562788 - MLT1D-int LTR MaLR -843 528 3 654 180 16 123 chr5 146067400 146067804 -53562346 - MLT1D LTR MaLR -55 450 1 278 250 0 50 chr5 146067917 146067997 -53562153 + MIR SINE MIR 86 161 -101 193 426 19 0 chr5 146067988 146068096 -53562054 - L2 LINE L2 -2816 498 389 * 208 289 0 0 chr5 146068161 146068199 -53561951 - L2 LINE L2 -22 3291 3254 824 190 10 45 chr5 146068224 146068424 -53561726 + MER3 DNA MER1_type 17 209 0 431 279 62 8 chr5 146069352 146069481 -53560669 - L2 LINE L2 0 3272 3137 517 288 35 126 chr5 146069746 146070295 -53559855 - L2 LINE L2 -6 3307 2809 381 166 28 212 chr5 146070333 146070550 -53559600 + Charlie4a DNA MER1_type 21 197 -311 794 161 13 7 chr5 146070564 146070713 -53559437 - L1MB4 LINE L1 0 6180 6031 431 156 0 22 chr5 146070715 146070805 -53559345 + T-rich Low_complexity Low_complexity 4 91 0 7197 42 34 0 chr5 146070806 146071739 -53558411 - L1PA7 LINE L1 0 6154 5219 729 198 228 0 chr5 146071773 146072010 -53558140 + Charlie4a DNA MER1_type 214 504 -4 864 274 113 30 chr5 146072014 146072111 -53558039 - L2 LINE L2 -504 2810 2722 2324 85 0 17 chr5 146072111 146072406 -53557744 - AluSc SINE Alu -19 290 1 864 274 113 30 chr5 146072406 146072636 -53557514 - L2 LINE L2 -592 2722 2456 202 152 0 0 chr5 146072680 146072713 -53557437 - L2 LINE L2 -224 3048 3016 456 200 30 20 chr5 146073824 146073924 -53556226 - L2 LINE L2 -30 3283 3183 740 158 0 31 chr5 146073954 146074081 -53556069 + FRAM SINE Alu 54 176 0 430 228 35 9 chr5 146074925 146075039 -53555111 + MER3 DNA MER1_type 38 154 -55 1737 154 52 8 chr5 146075100 146075464 -53554686 + MER3 DNA MER1_type 2242 2621 0 898 216 82 13 chr5 146075536 146075768 -53554382 - MIR SINE MIR -13 249 2 299 302 155 0 chr5 146076090 146076206 -53553944 - MIR SINE MIR -109 153 20 5590 144 28 19 chr5 146076510 146078142 -53552008 - L1MA6 LINE L1 -2 6298 4656 352 232 141 0 chr5 146078309 146078408 -53551742 + MIR SINE MIR 32 144 -118 315 246 33 21 chr5 146080098 146080189 -53549961 + MIR SINE MIR 17 103 -105 330 287 126 48 chr5 146081031 146081341 -53548809 - L1ME4a LINE L1 -177 5944 5611 2393 101 0 7 chr5 146081370 146081678 -53548472 - AluSg SINE Alu -4 306 1 229 163 23 0 chr5 146081885 146081928 -53548222 - MIR SINE MIR -65 143 100 563 292 102 25 chr5 146082471 146082793 -53547357 - L2 LINE L2 -21 3251 2905 652 272 35 12 chr5 146083878 146084051 -53546099 + MIR SINE MIR 8 184 -78 397 289 195 7 chr5 146084541 146084690 -53545460 - MIR SINE MIR -10 252 76 202 232 11 126 chr5 146086370 146086465 -53543685 + MIR SINE MIR 179 262 0 1038 39 78 0 chr5 146086485 146086614 -53543536 + MER85 DNA T2_type 1 139 0 2458 197 39 57 chr5 146086747 146087010 -53543140 + MER82 DNA MER2_type 1 267 -386 1635 77 45 9 chr5 146087010 146087230 -53542920 - MER30 DNA MER1_type -2 228 1 2458 197 39 57 chr5 146087230 146087408 -53542742 + MER82 DNA MER2_type 267 430 -223 2121 132 7 7 chr5 146087408 146087718 -53542432 + AluSq SINE Alu 3 312 -1 2458 197 39 57 chr5 146087718 146087894 -53542256 + MER82 DNA MER2_type 430 608 -45 770 246 74 9 chr5 146088734 146088860 -53541290 + MIR SINE MIR 13 160 -102 2352 110 3 0 chr5 146088860 146089170 -53540980 + AluSx SINE Alu 1 311 -1 770 246 74 9 chr5 146089170 146089258 -53540892 + MIR SINE MIR 160 241 -21 365 267 143 25 chr5 146089296 146089457 -53540693 + MIR SINE MIR 80 259 -3 7085 166 30 13 chr5 146101317 146101442 -53528708 - L1PA16 LINE L1 0 6166 6045 2324 94 7 0 chr5 146101442 146101739 -53528411 - AluSg SINE Alu -11 299 1 7085 166 30 13 chr5 146101739 146104024 -53526126 - L1PA16 LINE L1 -121 6045 3716 389 183 103 40 chr5 146104028 146104154 -53525996 - L1MC4 LINE L1 -405 7637 7504 * 4286 255 59 71 chr5 146104150 146107256 -53522894 - L1MC4a LINE L1 -480 7328 4263 1838 185 105 41 chr5 146107261 146107748 -53522402 + Charlie1b DNA MER1_type 1 518 -5 382 285 98 0 chr5 146107754 146107968 -53522182 - L1MC4a LINE L1 -1885 4261 4027 240 259 27 27 chr5 146108246 146108358 -53521792 - HAL1b LINE L1 -542 806 695 511 303 30 38 chr5 146108594 146108987 -53521163 - HAL1b LINE L1 -913 435 46 34 0 0 0 chr5 146110304 146110338 -53519812 + AT_rich Low_complexity Low_complexity 1 34 0 1402 93 0 33 chr5 146110338 146110552 -53519598 - L1PA14 LINE L1 0 6161 5955 635 280 38 10 chr5 146110979 146111326 -53518824 + L1ME LINE L1 5078 5434 -728 347 266 0 11 chr5 146111426 146111520 -53518630 + L1ME3A LINE L1 5782 5874 -296 21 0 0 0 chr5 146111846 146111867 -53518283 + AT_rich Low_complexity Low_complexity 1 21 0 650 220 37 51 chr5 146111874 146112088 -53518062 + L1MC5 LINE L1 7722 7932 -29 441 238 113 13 chr5 146112200 146112351 -53517799 - LTR33 LTR ERVL -13 508 343 340 209 143 0 chr5 146112533 146112624 -53517526 - LTR33 LTR ERVL -410 111 8 318 309 73 41 chr5 146112697 146112917 -53517233 - L1ME3 LINE L1 -212 5950 5724 487 278 19 31 chr5 146113107 146113266 -53516884 + MIR3 SINE MIR 6 160 -62 732 292 93 17 chr5 146113964 146114200 -53515950 - MIR SINE MIR -4 258 5 234 312 35 84 chr5 146114190 146114392 -53515758 + L2 LINE L2 3063 3254 -18 * 608 316 176 18 chr5 146115571 146115963 -53514187 - L2 LINE L2 -3 3310 2857 216 296 235 0 chr5 146116946 146117044 -53513106 + MIR SINE MIR 1 121 -141 903 174 47 12 chr5 146117145 146117317 -53512833 - MER5A DNA MER1_type -1 188 11 550 273 53 21 chr5 146117332 146117519 -53512631 - MIR SINE MIR -69 193 1 227 290 86 0 chr5 146119997 146120090 -53510060 + L1ME LINE L1 5494 5594 -527 413 323 66 20 chr5 146120395 146120593 -53509557 + MIR SINE MIR 20 226 -36 284 329 84 34 chr5 146120687 146120924 -53509226 - L3b LINE CR1 -42 1541 1293 1036 288 92 63 chr5 146121105 146122058 -53508092 + L2 LINE L2 2276 3246 -26 335 236 34 11 chr5 146122830 146122919 -53507231 + MIR SINE MIR 46 136 -72 285 242 0 30 chr5 146123095 146123161 -53506989 + MIR SINE MIR 89 152 -56 184 214 48 0 chr5 146123354 146123396 -53506754 - MIR SINE MIR -70 138 95 322 234 102 37 chr5 146126759 146126938 -53503212 + MIR3 SINE MIR 1 191 -58 264 273 121 23 chr5 146127073 146127205 -53502945 + MIR3 SINE MIR 3 147 -61 694 281 61 4 chr5 146128192 146128420 -53501730 - MIR SINE MIR -14 248 8 1680 283 178 32 chr5 146128697 146130275 -53499875 - L2 LINE L2 -3 3310 1487 536 267 64 43 chr5 146130662 146130849 -53499301 + MIR SINE MIR 13 203 -59 417 289 67 13 chr5 146130925 146131074 -53499076 + MIR SINE MIR 58 214 -48 21 0 0 0 chr5 146131819 146131840 -53498310 + GC_rich Low_complexity Low_complexity 1 21 0 359 236 155 20 chr5 146132111 146132259 -53497891 + L3 LINE CR1 1405 1572 -5 649 260 104 0 chr5 146132563 146132736 -53497414 - MIR SINE MIR 0 262 72 196 273 182 0 chr5 146133603 146133669 -53496481 - MIR SINE MIR -108 154 77 744 182 0 45 chr5 146133884 146134038 -53496112 + MER63 DNA MER1_type 2 774 -288 917 200 99 103 chr5 146134905 146135360 -53494790 + LTR33A LTR ERVL 1 453 -70 201 239 22 0 chr5 146135420 146135466 -53494684 + (CCCTG)n Simple_repeat Simple_repeat 3 49 0 422 225 68 78 chr5 146135707 146135898 -53494252 - MIR3 SINE MIR -15 193 5 181 292 112 34 chr5 146136721 146136810 -53493340 - L2 LINE L2 -496 2818 2723 294 318 103 8 chr5 146137102 146137228 -53492922 + MIR SINE MIR 113 250 -12 1765 99 0 0 chr5 146137740 146137961 -53492189 + AluSg/x SINE Alu 73 293 -19 1939 145 33 3 chr5 146137972 146138275 -53491875 + AluJo SINE Alu 1 312 0 840 259 43 89 chr5 146140583 146141000 -53489150 - L2 LINE L2 0 3313 2916 1099 118 67 6 chr5 146141291 146141469 -53488681 - MER5A DNA MER1_type 0 189 1 234 0 0 0 chr5 146141991 146142017 -53488133 + (TC)n Simple_repeat Simple_repeat 1 26 0 392 295 126 11 chr5 146143899 146144082 -53486068 - MIR SINE MIR 0 262 59 683 229 173 9 chr5 146144222 146144436 -53485714 + MIR SINE MIR 14 262 0 224 283 0 0 chr5 146144507 146144553 -53485597 + L2 LINE L2 3268 3313 0 185 187 40 93 chr5 146145794 146145869 -53484281 - L2 LINE L2 -221 3051 2981 208 314 129 8 chr5 146145972 146146096 -53484054 - MER5B DNA MER1_type -9 169 31 582 247 18 76 chr5 146148714 146148946 -53481204 + MIR SINE MIR 3 215 -47 212 161 0 0 chr5 146149007 146149038 -53481112 - MIR SINE MIR -84 124 94 228 253 66 33 chr5 146151266 146151357 -53478793 + MIR SINE MIR 119 212 -50 407 303 117 6 chr5 146152022 146152184 -53477966 - MIR SINE MIR -10 252 73 249 290 20 30 chr5 146152217 146152317 -53477833 + L2 LINE L2 3142 3240 -32 203 86 0 29 chr5 146153628 146153663 -53476487 + (TCTCC)n Simple_repeat Simple_repeat 4 37 0 2112 122 7 0 chr5 146153773 146154067 -53476083 + AluSx SINE Alu 1 296 -16 362 294 34 14 chr5 146154154 146154300 -53475850 - MIR3 SINE MIR -18 190 42 199 214 67 34 chr5 146154333 146154422 -53475728 - L2 LINE L2 -213 3059 2968 1327 232 48 46 chr5 146154786 146155200 -53474950 - MLT1C LTR MaLR 0 467 53 838 222 0 54 chr5 146155514 146155735 -53474415 + MER3 DNA MER1_type 1 209 0 399 219 123 26 chr5 146157148 146157262 -53472888 - L2 LINE L2 -6 3307 3183 1904 139 40 91 chr5 146157802 146158197 -53471953 + THE1C LTR MaLR 1 375 0 226 237 340 0 chr5 146158550 146158647 -53471503 - L2 LINE L2 0 3272 3143 209 267 0 0 chr5 146158980 146159040 -53471110 - L3 LINE CR1 -548 1029 970 588 259 111 16 chr5 146160197 146160386 -53469764 + MIR SINE MIR 6 212 -50 2240 291 116 31 chr5 146160668 146162403 -53467747 + L1ME2 LINE L1 25 1904 -4890 461 257 105 7 chr5 146162464 146162616 -53467534 + L1ME2 LINE L1 2302 2468 -4654 6261 238 66 24 chr5 146162616 146164884 -53465266 + L1ME2 LINE L1 2724 5046 -1895 7633 117 14 7 chr5 146164903 146166629 -53463521 - L1MA2 LINE L1 0 6304 4563 3304 223 60 10 chr5 146166639 146168302 -53461848 + L1ME2 LINE L1 5047 6805 -154 277 253 36 0 chr5 146168324 146168407 -53461743 + L1ME2 LINE L1 6874 6959 0 30 0 0 0 chr5 146169180 146169210 -53460940 + AT_rich Low_complexity Low_complexity 1 30 0 508 279 6 13 chr5 146171228 146171386 -53458764 + L2 LINE L2 3156 3312 -1 227 327 10 19 chr5 146172367 146172471 -53457679 - L2 LINE L2 -10 3262 3160 206 200 0 0 chr5 146172842 146172887 -53457263 - L2 LINE L2 -21 3292 3248 472 271 141 21 chr5 146173810 146174005 -53456145 - L1MC/D LINE L1 -603 5575 5405 2298 84 0 42 chr5 146174005 146174315 -53455835 + AluSx SINE Alu 1 297 -15 472 271 141 21 chr5 146174315 146174673 -53455477 - L1MC/D LINE L1 -773 5405 5191 21 36 0 0 chr5 146174806 146174834 -53455316 + AT_rich Low_complexity Low_complexity 1 28 0 2316 103 0 0 chr5 146176339 146176631 -53453519 + AluSx SINE Alu 1 292 -20 1002 109 43 71 chr5 146176632 146176816 -53453334 - L1MB3 LINE L1 -7 6176 5998 496 223 85 8 chr5 146177111 146177241 -53452909 - MIR SINE MIR -110 152 13 545 221 87 35 chr5 146178244 146178416 -53451734 - MIR SINE MIR -68 194 14 590 221 121 0 chr5 146178985 146179134 -53451016 + MIR SINE MIR 45 211 -51 282 276 69 35 chr5 146179458 146179574 -53450576 - L2 LINE L2 -7 3265 3146 240 354 35 0 chr5 146179603 146179716 -53450434 - L2 LINE L2 -6 3307 3191 870 250 37 8 chr5 146179823 146180067 -53450083 + MIR SINE MIR 1 251 -11 2381 68 3 0 chr5 146180181 146180475 -53449675 + AluY SINE Alu 1 295 -16 1018 280 81 52 chr5 146180513 146181152 -53448998 + L1MC4a LINE L1 5254 5911 -1897 5823 243 105 58 chr5 146182106 146182975 -53447175 - HAL1 LINE L1 0 2507 1681 2167 118 0 13 chr5 146182975 146183280 -53446870 - AluY SINE Alu -10 301 1 5823 243 105 58 chr5 146183280 146184299 -53445851 - HAL1 LINE L1 -826 1681 479 1903 149 40 63 chr5 146184299 146184696 -53445454 - MLT1B LTR MaLR -2 388 1 5823 243 105 58 chr5 146184696 146185197 -53444953 - HAL1 LINE L1 -2028 479 3 366 317 14 14 chr5 146186085 146186227 -53443923 - MIR SINE MIR -77 185 44 291 241 66 29 chr5 146186421 146186558 -53443592 + L2 LINE L2 2555 2696 -618 1862 210 31 39 chr5 146186560 146187045 -53443105 - L1ME2 LINE L1 0 6164 5684 5907 107 8 28 chr5 146187056 146187143 -53443007 - L1PA16 LINE L1 -10 6156 6069 2374 128 28 14 chr5 146187143 146187502 -53442648 + THE1B LTR MaLR 1 364 0 5907 107 8 28 chr5 146187502 146189084 -53441066 - L1PA16 LINE L1 -97 6069 4502 1134 188 64 151 chr5 146239264 146239479 -53390671 + L1ME3A LINE L1 4639 4871 -1275 10401 40 12 51 chr5 146239479 146240911 -53389239 - SVA Other Other -9 1377 2 1134 188 64 151 chr5 146240911 146241159 -53388991 + L1ME3A LINE L1 4871 5045 -1101 1672 161 9 28 chr5 146241159 146241476 -53388674 + AluSx SINE Alu 1 311 -1 1134 188 64 151 chr5 146241476 146241587 -53388563 + L1ME3A LINE L1 5045 5164 -982 1603 214 26 24 chr5 146241590 146241969 -53388181 + L1ME3A LINE L1 5791 6170 0 559 254 68 23 chr5 146241968 146242319 -53387831 + L1M4 LINE L1 3095 3461 -2685 * 1068 245 77 30 chr5 146242309 146243707 -53386443 - L1MC4 LINE L1 -1190 6618 5305 1810 148 3 13 chr5 146243723 146244033 -53386117 - AluJb SINE Alu -5 307 1 1468 176 24 110 chr5 146244049 146244458 -53385692 + MLT1A2 LTR MaLR 1 374 0 2418 53 0 3 chr5 146244552 146244855 -53385295 - AluY SINE Alu -9 302 1 2196 154 36 3 chr5 146244872 146245262 -53384888 - Charlie1a DNA MER1_type -410 1045 643 1382 178 29 32 chr5 146245268 146245323 -53384827 - Charlie1a DNA MER1_type -2470 291 237 405 0 0 0 chr5 146245323 146245368 -53384782 + (TG)n Simple_repeat Simple_repeat 1 45 0 1382 178 29 32 chr5 146245368 146245593 -53384557 - Charlie1a DNA MER1_type -2524 237 12 1163 153 5 0 chr5 146245815 146246004 -53384146 - AluSx SINE Alu -122 190 1 2219 194 50 42 chr5 146246117 146246621 -53383529 + Charlie1a DNA MER1_type 1 508 -947 1072 153 105 32 chr5 146246621 146246869 -53383281 + ORSL DNA AcHobo 1 266 -9 230 128 26 0 chr5 146246871 146246910 -53383240 + Charlie1a DNA MER1_type 498 537 -918 604 126 219 8 chr5 146246939 146247058 -53383092 - ORSL DNA AcHobo -130 145 2 4361 171 30 14 chr5 146247064 146247954 -53382196 + Charlie1a DNA MER1_type 539 1443 -12 1123 311 85 15 chr5 146248673 146249133 -53381017 + L2 LINE L2 2822 3313 0 193 167 62 0 chr5 146249289 146249337 -53380813 - MIR SINE MIR -74 188 138 23 78 0 0 chr5 146250092 146250143 -53380007 + GC_rich Low_complexity Low_complexity 1 51 0 22 70 0 0 chr5 146250216 146250259 -53379891 + GC_rich Low_complexity Low_complexity 1 43 0 283 320 174 32 chr5 146252610 146252954 -53377196 - L2 LINE L2 -6 3266 2874 202 308 0 15 chr5 146255104 146255169 -53374981 - L2 LINE L2 -25 3247 3184 1143 240 194 14 chr5 146256534 146256901 -53373249 + MLT1J2 LTR MaLR 1 433 -17 679 323 10 0 chr5 146257018 146257216 -53372934 - MIR SINE MIR -55 207 8 186 301 116 20 chr5 146257808 146257954 -53372196 - L2 LINE L2 -270 3002 2843 205 331 32 24 chr5 146258280 146258404 -53371746 - L2 LINE L2 -976 2338 2214 1580 255 129 84 chr5 146261105 146262145 -53368005 - L1MC4a LINE L1 -1 7807 6721 240 333 35 18 chr5 146262207 146262321 -53367829 - MIR3 SINE MIR -52 156 41 307 329 38 16 chr5 146262815 146262984 -53367166 + MIR SINE MIR 34 205 -57 28 29 0 0 chr5 146263460 146263495 -53366655 + AT_rich Low_complexity Low_complexity 1 35 0 507 245 67 97 chr5 146263971 146264269 -53365881 - L2 LINE L2 -18 3254 2966 570 272 160 0 chr5 146265029 146265242 -53364908 + MIR SINE MIR 14 260 -2 429 0 32 16 chr5 146266186 146266248 -53363902 + (CA)n Simple_repeat Simple_repeat 2 64 0 236 156 13 104 chr5 146266472 146266549 -53363601 - L1ME4a LINE L1 -68 6053 5984 1193 255 13 3 chr5 146267193 146267503 -53362647 - L1M4 LINE L1 -914 5232 4920 464 254 82 63 chr5 146267999 146268314 -53361836 - L1MEd LINE L1 -4904 1215 895 963 190 0 0 chr5 146268330 146268493 -53361657 - AluJ SINE Alu -22 290 128 311 316 62 23 chr5 146268571 146268925 -53361225 - L1M4 LINE L1 -990 5156 4789 190 361 36 0 chr5 146269819 146269902 -53360248 - L2 LINE L2 -1312 2002 1917 473 215 158 43 chr5 146271163 146271379 -53358771 - MIR SINE MIR -16 246 9 451 260 120 10 chr5 146273167 146273359 -53356791 - MIR SINE MIR -44 218 6 850 142 66 3 chr5 146278572 146278871 -53351279 - L1MA7 LINE L1 -107 6184 5821 671 269 135 33 chr5 146278898 146279232 -53350918 - L1MC4 LINE L1 -73 7969 7602 463 331 41 0 chr5 146279499 146279671 -53350479 + MIR3 SINE MIR 30 208 0 284 248 62 18 chr5 146282997 146283110 -53347040 + MIR SINE MIR 27 144 -64 24 0 0 0 chr5 146283349 146283373 -53346777 + AT_rich Low_complexity Low_complexity 1 24 0 521 226 265 6 chr5 146283394 146283575 -53346575 + MIR SINE MIR 2 229 -33 1039 280 43 73 chr5 146283696 146284143 -53346007 - THE1C LTR MaLR 0 428 1 300 291 95 25 chr5 146284148 146284306 -53345844 - L1MC/D LINE L1 -2049 5759 5591 567 293 200 6 chr5 146284399 146284734 -53345416 - L2 LINE L2 -4 3309 2910 506 225 25 0 chr5 146284767 146284887 -53345263 - Charlie4 DNA MER1_type -2 1959 1837 2419 48 0 98 chr5 146285585 146285941 -53344209 - L1PA6 LINE L1 -4 6150 5830 4617 29 23 0 chr5 146285952 146286507 -53343643 + L1PA6 LINE L1 5254 5821 -333 542 153 198 18 chr5 146286818 146286929 -53343221 - AluJ SINE Alu -179 133 3 221 359 145 0 chr5 146286936 146287053 -53343097 - MIR SINE MIR -118 144 11 1934 168 117 171 chr5 146287074 146288222 -53341928 - Charlie2a DNA MER1_type -268 2594 1509 766 298 16 8 chr5 146288316 146288564 -53341586 - Charlie2b DNA MER1_type -2143 639 390 509 273 58 19 chr5 146288601 146288806 -53341344 - Charlie2b DNA MER1_type -2641 221 9 208 311 0 16 chr5 146293713 146293774 -53336376 - MIR3 SINE MIR -6 202 143 2009 135 6 3 chr5 146298139 146298450 -53331700 + AluJo SINE Alu 1 312 0 200 152 30 0 chr5 146299710 146299743 -53330407 - MER5A DNA MER1_type -4 185 152 210 230 95 103 chr5 146303592 146303718 -53326432 + MIR3 SINE MIR 11 135 -73 228 261 174 0 chr5 146304311 146304403 -53325747 - L1ME4a LINE L1 -57 6064 5957 261 298 146 51 chr5 146306615 146306793 -53323357 + MIR SINE MIR 29 223 -39 234 331 74 20 chr5 146307739 146307887 -53322263 + MIR SINE MIR 60 215 -47 607 317 96 10 chr5 146308660 146308868 -53321282 - MIR SINE MIR -6 256 31 193 331 66 44 chr5 146309441 146309622 -53320528 + L2 LINE L2 2993 3177 -95 283 244 191 69 chr5 146310098 146310229 -53319921 - MIR SINE MIR -57 151 5 392 202 246 0 chr5 146311351 146311465 -53318685 + MER5A DNA MER1_type 48 189 0 191 200 0 0 chr5 146313023 146313058 -53317092 + MIR SINE MIR 118 152 -110 201 44 22 67 chr5 146315374 146315419 -53314731 + (GAAA)n Simple_repeat Simple_repeat 1 43 0 427 309 0 0 chr5 146315926 146316036 -53314114 - MIR SINE MIR -26 236 127 737 228 72 16 chr5 146317103 146317296 -53312854 - MIR SINE MIR -37 225 22 277 271 136 0 chr5 146320205 146320323 -53309827 - MIR SINE MIR -70 192 59 258 263 101 92 chr5 146320339 146320677 -53309473 + L2 LINE L2 2827 3167 -105 473 324 42 14 chr5 146321270 146321486 -53308664 - MIR SINE MIR -39 223 2 267 320 0 0 chr5 146322274 146322349 -53307801 + MIR SINE MIR 74 148 -60 207 120 173 53 chr5 146322619 146322694 -53307456 + MIR SINE MIR 70 153 -55 900 189 99 5 chr5 146322988 146323179 -53306971 - MER3 DNA MER1_type 0 209 1 199 244 0 0 chr5 146324318 146324359 -53305791 - MIR SINE MIR -58 150 110 453 234 134 100 chr5 146325810 146326049 -53304101 + MIR SINE MIR 4 250 -12 387 337 12 47 chr5 146326064 146326236 -53303914 - MIR SINE MIR -86 176 11 197 242 58 75 chr5 146326849 146326969 -53303181 - MIR SINE MIR -72 136 19 2075 175 60 30 chr5 146327856 146328324 -53301826 - MLT1D LTR MaLR 0 505 24 216 399 14 0 chr5 146328882 146329025 -53301125 + MIR SINE MIR 48 192 -70 478 293 189 11 chr5 146330118 146330309 -53299841 - MIR SINE MIR -10 252 28 2400 92 0 10 chr5 146330324 146330629 -53299521 - AluSq SINE Alu -9 304 3 381 314 88 20 chr5 146331645 146331846 -53298304 + MIR SINE MIR 16 240 -22 273 227 57 0 chr5 146332120 146332208 -53297942 + L1MEd LINE L1 45 137 -5982 235 278 33 11 chr5 146333359 146333449 -53296701 + MLT1I LTR MaLR 57 148 -261 421 289 44 6 chr5 146333674 146333833 -53296317 + L1MEd LINE L1 1091 1255 -4864 31 0 0 0 chr5 146333837 146333868 -53296282 + AT_rich Low_complexity Low_complexity 1 31 0 306 308 0 11 chr5 146333868 146333959 -53296191 + L1MEd LINE L1 1306 1395 -4915 356 317 43 43 chr5 146334068 146334229 -53295921 - MIR3 SINE MIR -27 181 21 2011 215 52 12 chr5 146335754 146336251 -53293899 - L1MC4 LINE L1 -826 7216 6700 1551 179 48 24 chr5 146336278 146336608 -53293542 + MER7A DNA MER2_type 7 342 -4 316 248 30 20 chr5 146336732 146336833 -53293317 - L1MD3 LINE L1 -1455 6540 6439 1398 229 123 22 chr5 146336973 146337428 -53292722 - L1MB7 LINE L1 -37 6147 5647 1699 163 65 23 chr5 146337433 146337855 -53292295 + MLT1D LTR MaLR 5 505 0 486 191 51 10 chr5 146337855 146337988 -53292162 - L1MB7 LINE L1 -519 5647 5514 231 254 73 36 chr5 146337966 146338076 -53292074 - L1M4 LINE L1 -6412 130 17 * 565 232 76 45 chr5 146338179 146338398 -53291752 + MIR SINE MIR 32 253 -9 432 233 0 11 chr5 146338741 146338831 -53291319 - MIR SINE MIR -57 151 63 461 244 103 31 chr5 146339323 146339484 -53290666 - MIR SINE MIR -35 173 14 216 116 0 47 chr5 146340756 146340799 -53289351 + (GGGA)n Simple_repeat Simple_repeat 2 42 0 266 359 94 0 chr5 146341278 146341384 -53288766 - MIR SINE MIR -109 153 38 492 99 0 0 chr5 146341876 146341947 -53288203 + (TGGA)n Simple_repeat Simple_repeat 2 72 0 254 111 0 0 chr5 146342496 146342532 -53287618 - MIR SINE MIR -62 146 111 861 200 70 22 chr5 146343706 146343891 -53286259 + MIR SINE MIR 59 252 -10 298 312 106 41 chr5 146344792 146345010 -53285140 + MIR SINE MIR 20 251 -11 1995 235 133 16 chr5 146345623 146345833 -53284317 - L1ME1 LINE L1 -5 6161 5977 1460 144 131 23 chr5 146345833 146346139 -53284011 - MER44D DNA MER2_type 0 609 1 1995 235 133 16 chr5 146346139 146346546 -53283604 - L1ME1 LINE L1 -189 5977 5472 4798 255 64 30 chr5 146346575 146347075 -53283075 - L1ME1 LINE L1 -5 6161 5680 216 0 0 0 chr5 146347075 146347099 -53283051 + (CTAAA)n Simple_repeat Simple_repeat 2 25 0 4798 255 64 30 chr5 146347099 146348246 -53281904 - L1ME1 LINE L1 -486 5680 4574 2403 80 0 46 chr5 146348246 146348570 -53281580 - AluSq SINE Alu -4 309 1 4798 255 64 30 chr5 146348570 146349510 -53280640 - L1ME1 LINE L1 -1592 4574 3454 1033 212 44 5 chr5 146349517 146349843 -53280307 + L1M4 LINE L1 5084 5423 -743 196 252 207 59 chr5 146350166 146350253 -53279897 - MIR SINE MIR -48 214 141 1419 187 59 61 chr5 146350253 146350628 -53279522 - MLT1A2 LTR MaLR 0 374 1 196 252 207 59 chr5 146350628 146350675 -53279475 - MIR SINE MIR -121 141 60 214 232 196 14 chr5 146352532 146352689 -53277461 + MIR SINE MIR 16 231 -31 1311 228 43 8 chr5 146352871 146353222 -53276928 + L1M4 LINE L1 3498 3860 -2286 4350 213 68 42 chr5 146353352 146354752 -53275398 + L1MC4a LINE L1 6395 7983 0 982 223 117 50 chr5 146354837 146355479 -53274671 + L1MEc LINE L1 1906 2551 -3664 552 249 78 74 chr5 146355481 146356034 -53274116 + L1MEc LINE L1 2984 3538 -2677 1153 195 97 12 chr5 146356168 146356507 -53273643 + L1MD3 LINE L1 7616 7983 -12 1017 224 105 54 chr5 146356591 146357241 -53272909 + L1MEc LINE L1 1906 2551 -3664 791 234 80 97 chr5 146357244 146357809 -53272341 + L1MEc LINE L1 2984 3538 -2677 986 157 6 17 chr5 146357963 146358135 -53272015 + L1MB7 LINE L1 5994 6163 -21 252 268 52 8 chr5 146358149 146358282 -53271868 + L1MEc LINE L1 3631 3772 -2443 2215 233 61 19 chr5 146358426 146359061 -53271089 + L1MC4a LINE L1 7147 7808 0 1164 224 95 52 chr5 146359147 146359801 -53270349 + L1ME2 LINE L1 1906 2551 -3664 4451 199 36 78 chr5 146359804 146360523 -53269627 + L1MB7 LINE L1 2984 3731 -2522 966 149 11 23 chr5 146360523 146360698 -53269452 + L1MB7 LINE L1 5994 6166 -18 4451 199 36 78 chr5 146360698 146362318 -53267832 + L1MB7 LINE L1 3731 5967 -286 2321 94 0 0 chr5 146362318 146362617 -53267533 + AluSx SINE Alu 1 299 -13 4451 199 36 78 chr5 146362617 146362877 -53267273 + L1MB7 LINE L1 5967 6236 -17 480 203 236 8 chr5 146362878 146363119 -53267031 + L1ME2 LINE L1 3755 4050 -2165 1223 252 74 85 chr5 146363120 146363660 -53266490 - MLT1E LTR MaLR -53 540 7 1935 195 26 106 chr5 146363661 146364432 -53265718 + L1ME2 LINE L1 4064 4772 -1443 11275 188 51 12 chr5 146364442 146367610 -53262540 + L1MA9 LINE L1 2629 5924 -388 455 200 63 0 chr5 146367640 146367735 -53262415 + L1MA9 LINE L1 6174 6274 -38 747 219 67 24 chr5 146367753 146367963 -53262187 + L1ME2 LINE L1 4772 4990 -1225 420 256 94 0 chr5 146368144 146368304 -53261846 + L1ME2 LINE L1 5575 5749 -484 9563 176 19 15 chr5 146368313 146368663 -53261487 + L1PA16 LINE L1 3137 3484 -2682 2507 138 29 12 chr5 146368663 146369082 -53261068 - MSTB LTR MaLR 0 426 1 9563 176 19 15 chr5 146369082 146371649 -53258501 + L1PA16 LINE L1 3484 6071 -95 2296 128 28 14 chr5 146371649 146372008 -53258142 - THE1B LTR MaLR 0 364 1 9563 176 19 15 chr5 146372008 146372095 -53258055 + L1PA16 LINE L1 6071 6156 -10 1820 209 33 39 chr5 146372106 146372590 -53257560 + L1ME2 LINE L1 5753 6233 0 276 241 66 29 chr5 146372592 146372729 -53257421 - L2 LINE L2 -618 2696 2555 418 317 14 14 chr5 146372923 146373065 -53257085 + MIR SINE MIR 44 185 -77 5577 243 111 56 chr5 146373953 146374454 -53255696 + HAL1 LINE L1 3 475 -2032 1864 149 43 61 chr5 146374454 146374849 -53255301 + MLT1B LTR MaLR 1 388 -2 5577 243 111 56 chr5 146374849 146375866 -53254284 + HAL1 LINE L1 475 1435 -1072 2099 118 0 13 chr5 146375866 146376171 -53253979 + AluY SINE Alu 1 301 -10 5577 243 111 56 chr5 146376171 146377004 -53253146 + HAL1 LINE L1 1435 2483 -24 920 278 92 37 chr5 146377991 146378502 -53251648 - L1MC4a LINE L1 -1897 5911 5373 1662 149 14 7 chr5 146478522 146478810 -53151340 + AluJb SINE Alu 12 301 -11 1913 121 0 21 chr5 146478831 146479147 -53151003 + AluSx SINE Alu 1 310 0 2017 130 0 9 chr5 146479147 146479462 -53150688 + AluSq SINE Alu 2 313 0 352 191 48 12 chr5 146480081 146480165 -53149985 + MIR SINE MIR 88 174 -88 240 303 26 0 chr5 146480261 146480337 -53149813 - L2 LINE L2 -11 3261 3184 1002 157 0 18 chr5 146480984 146481150 -53149000 - AluSx SINE Alu -149 163 1 1236 174 46 128 chr5 146481150 146481477 -53148673 - AluJo SINE Alu -12 300 1 2371 65 7 3 chr5 146481717 146482026 -53148124 + AluY SINE Alu 1 310 -1 368 319 55 35 chr5 146482316 146482573 -53147577 - L2 LINE L2 -531 2783 2522 494 138 0 43 chr5 146483235 146483329 -53146821 - L1MB7 LINE L1 -16 6168 6079 1640 163 7 39 chr5 146483815 146484122 -53146028 + AluJo SINE Alu 5 301 -11 379 60 20 0 chr5 146484131 146484181 -53145969 + MER66B LTR ERV1 295 345 -141 2216 96 0 0 chr5 146484935 146485228 -53144922 - AluSg SINE Alu -17 293 1 244 333 9 29 chr5 146485293 146485398 -53144752 - MIR SINE MIR -90 118 16 602 311 75 28 chr5 146485777 146486137 -53144013 - L3 LINE CR1 -68 1509 1133 585 319 46 21 chr5 146486258 146486499 -53143651 - MIR SINE MIR -1 261 15 186 302 16 0 chr5 146487613 146487676 -53142474 + MIR SINE MIR 76 139 -69 224 176 176 0 chr5 146487864 146487932 -53142218 - MIR SINE MIR -11 251 172 315 0 0 0 chr5 146489241 146489276 -53140874 + (TTA)n Simple_repeat Simple_repeat 2 36 0 307 121 103 0 chr5 146489278 146489336 -53140814 - Alu SINE Alu -16 285 222 505 315 50 68 chr5 146489633 146490014 -53140136 + L2 LINE L2 2876 3249 -23 207 0 0 0 chr5 146491800 146491823 -53138327 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 29 28 0 0 chr5 146492674 146492710 -53137440 + AT_rich Low_complexity Low_complexity 1 36 0 2315 82 7 0 chr5 146493423 146493728 -53136422 - AluSx SINE Alu -5 307 1 1134 150 4 101 chr5 146495737 146495984 -53134166 + L1PB4 LINE L1 5929 6151 -5 489 110 0 66 chr5 146495985 146496076 -53134074 + L1PB4 LINE L1 6072 6156 0 630 81 0 12 chr5 146496173 146496284 -53133866 + L1PA3 LINE L1 6022 6129 -26 747 204 24 42 chr5 146496385 146496552 -53133598 - AluSq SINE Alu -149 164 1 394 193 18 37 chr5 146496632 146496741 -53133409 - L1ME4a LINE L1 -73 6048 5942 251 316 89 19 chr5 146496894 146497052 -53133098 - L1ME4a LINE L1 -383 5738 5570 938 143 0 0 chr5 146499386 146499519 -53130631 + AluSq/x SINE Alu 1 133 -179 1929 118 50 3 chr5 146499528 146499825 -53130325 + AluSx SINE Alu 1 311 -1 507 204 40 46 chr5 146500522 146500674 -53129476 + MER3 DNA MER1_type 15 165 -44 374 178 59 10 chr5 146500815 146500916 -53129234 - L1MB7 LINE L1 -162 6022 5917 1131 157 22 39 chr5 146501172 146501402 -53128748 + AluJo SINE Alu 87 312 0 1704 182 3 10 chr5 146503403 146503711 -53126439 - AluJo SINE Alu -6 306 1 272 245 64 11 chr5 146504861 146504955 -53125195 + LTR67 LTR ERVL 458 556 -1 229 325 48 44 chr5 146505044 146505159 -53124991 + MIR SINE MIR 40 153 -64 1772 78 123 11 chr5 146505175 146505443 -53124707 + AluSx SINE Alu 1 298 -14 243 300 42 67 chr5 146505942 146506062 -53124088 + L2 LINE L2 3124 3240 -32 2114 121 7 0 chr5 146506492 146506789 -53123361 + AluSx SINE Alu 3 301 -11 249 167 0 0 chr5 146506893 146506935 -53123215 - L2 LINE L2 -4 3309 3268 516 200 75 8 chr5 146507082 146507202 -53122948 - MIR SINE MIR -27 235 108 234 0 0 0 chr5 146508148 146508174 -53121976 + (T)n Simple_repeat Simple_repeat 1 26 0 209 279 29 0 chr5 146509082 146509150 -53121000 - L2 LINE L2 0 3272 3203 236 318 110 58 chr5 146509395 146509425 -53120725 - MIR3 SINE MIR -11 197 170 2249 104 0 0 chr5 146509425 146509723 -53120427 + AluSq SINE Alu 1 298 -15 236 318 110 58 chr5 146509723 146509846 -53120304 - MIR3 SINE MIR -38 170 36 28 0 0 47 chr5 146510598 146510616 -53119534 + AT_rich Low_complexity Low_complexity 1 18 -23 2434 69 3 0 chr5 146510616 146510921 -53119229 + AluSp SINE Alu 1 306 -7 28 0 0 47 chr5 146510921 146510945 -53119205 + AT_rich Low_complexity Low_complexity 18 41 0 2031 134 0 3 chr5 146511346 146511652 -53118498 - AluJb SINE Alu -7 305 1 440 281 46 36 chr5 146515968 146516164 -53113986 - L1ME3A LINE L1 0 6170 5973 315 285 102 24 chr5 146516211 146516380 -53113770 - L1ME3A LINE L1 -170 5992 5806 2299 98 0 7 chr5 146517093 146517399 -53112751 + AluSx SINE Alu 1 304 -8 317 297 11 0 chr5 146517808 146517899 -53112251 + MIR3 SINE MIR 88 179 -29 331 316 0 0 chr5 146518089 146518187 -53111963 + MIR3 SINE MIR 111 208 0 439 244 20 114 chr5 146518218 146518419 -53111731 - MIR SINE MIR -36 226 45 357 197 55 158 chr5 146518859 146519042 -53111108 - MIR SINE MIR -48 214 51 230 262 215 9 chr5 146519196 146519303 -53110847 + L2 LINE L2 3139 3267 -5 182 387 9 54 chr5 146519463 146519495 -53110655 + MIR SINE MIR 2 34 -228 2236 106 3 3 chr5 146519495 146519806 -53110344 + AluSq SINE Alu 1 311 -2 182 387 9 54 chr5 146519806 146519884 -53110266 + MIR SINE MIR 34 107 -155 641 129 0 0 chr5 146520023 146520116 -53110034 + AluSg/x SINE Alu 207 299 -11 306 122 0 54 chr5 146520547 146520621 -53109529 + (TTCTCC)n Simple_repeat Simple_repeat 3 72 0 2193 84 7 3 chr5 146521474 146521770 -53108380 + AluSx SINE Alu 1 297 -15 2174 79 0 17 chr5 146521770 146522095 -53108055 + AluSq SINE Alu 1 321 0 275 356 142 10 chr5 146524512 146524821 -53105329 + L2 LINE L2 2527 2876 -438 297 307 98 26 chr5 146524871 146525024 -53105126 + L2 LINE L2 3025 3188 -84 320 322 126 23 chr5 146525955 146526129 -53104021 - MIR SINE MIR -66 196 5 1271 105 0 0 chr5 146526451 146526622 -53103528 + AluSg/x SINE Alu 131 301 -11 2380 62 10 0 chr5 146528344 146528648 -53101502 + AluY SINE Alu 1 307 -4 35 63 0 0 chr5 146529153 146529216 -53100934 + GC_rich Low_complexity Low_complexity 1 63 0 1025 245 31 16 chr5 146531855 146532112 -53098038 - MIR SINE MIR -1 261 1 237 288 58 79 chr5 146533456 146533595 -53096555 - MIR SINE MIR -92 170 35 2919 239 189 2 chr5 146533695 146533761 -53096389 - L2 LINE L2 -446 2868 2816 1837 143 0 23 chr5 146533761 146534061 -53096089 - AluJo SINE Alu -19 293 1 2919 239 189 2 chr5 146534061 146535023 -53095127 - L2 LINE L2 -498 2816 1648 182 269 87 77 chr5 146535524 146535628 -53094522 - MIR SINE MIR -112 150 46 2427 76 0 9 chr5 146535941 146536256 -53093894 + AluSx SINE Alu 1 312 0 227 308 58 42 chr5 146537688 146537808 -53092342 - L3 LINE CR1 -87 1490 1369 192 222 22 0 chr5 146538407 146538452 -53091698 - L2 LINE L2 -3 3310 3265 586 207 215 3 chr5 146538497 146538668 -53091482 - MIR SINE MIR -20 242 50 239 330 10 21 chr5 146539458 146539555 -53090595 - MIR SINE MIR -87 175 80 313 330 77 67 chr5 146539614 146539899 -53090251 + L2 LINE L2 2873 3160 -112 491 267 20 53 chr5 146540203 146540353 -53089797 - MER91A DNA MER1_type 0 196 52 390 250 30 0 chr5 146541640 146541740 -53088410 - MIR SINE MIR -121 141 39 508 284 40 7 chr5 146542579 146542727 -53087423 + MIR SINE MIR 66 218 -44 180 327 79 0 chr5 146543629 146543730 -53086420 - MIR3 SINE MIR -39 169 61 253 215 138 0 chr5 146544587 146544652 -53085498 + MIR SINE MIR 80 153 -109 195 253 67 13 chr5 146545248 146545323 -53084827 - MIR3 SINE MIR -26 182 104 426 308 9 0 chr5 146546039 146546146 -53084004 + L2 LINE L2 3163 3270 -2 574 287 76 40 chr5 146546163 146546238 -53083912 - MIR SINE MIR -12 250 179 2314 82 0 0 chr5 146546238 146546531 -53083619 + AluSg SINE Alu 5 297 -13 574 287 76 40 chr5 146546531 146546678 -53083472 - MIR SINE MIR -83 179 20 362 241 263 0 chr5 146547564 146547697 -53082453 - MIR SINE MIR -59 203 36 226 341 167 16 chr5 146549926 146550172 -53079978 + L2 LINE L2 2491 2773 -541 454 265 53 15 chr5 146550313 146550445 -53079705 + MIR SINE MIR 63 199 -63 222 91 0 0 chr5 146550784 146550817 -53079333 + (AGCTG)n Simple_repeat Simple_repeat 4 36 0 258 32 0 0 chr5 146551634 146551665 -53078485 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 319 301 58 58 chr5 146552048 146552221 -53077929 - MIR SINE MIR -16 246 74 696 299 69 33 chr5 146552795 146553315 -53076835 - L2 LINE L2 -14 3299 2711 2002 133 33 0 chr5 146553315 146553616 -53076534 + AluSx SINE Alu 1 311 -1 696 299 69 33 chr5 146553616 146553692 -53076458 - L2 LINE L2 -602 2711 2639 472 256 17 50 chr5 146554485 146554665 -53075485 + MER117 DNA MER1_type 4 177 -20 324 288 46 101 chr5 146555933 146556152 -53073998 + L2 LINE L2 3014 3220 -52 252 304 0 0 chr5 146556770 146556839 -53073311 - MIR SINE MIR -56 152 84 882 262 4 32 chr5 146556939 146557191 -53072959 - MIR SINE MIR -14 248 4 230 200 40 0 chr5 146557536 146557586 -53072564 + MIR SINE MIR 194 245 -17 286 278 78 11 chr5 146558623 146558713 -53071437 + MIR SINE MIR 46 141 -121 636 221 156 0 chr5 146559000 146559154 -53070996 - MER5A DNA MER1_type -1 188 11 390 254 10 115 chr5 146560995 146561204 -53068946 - MLT1J2 LTR MaLR 0 450 264 535 283 45 18 chr5 146561535 146561758 -53068392 - MIR SINE MIR -11 251 23 482 282 6 25 chr5 146562152 146562315 -53067835 - MER63A DNA MER1_type -3 207 48 418 302 123 17 chr5 146562404 146562639 -53067511 - MIR SINE MIR 0 262 3 345 292 31 25 chr5 146562650 146562811 -53067339 + MER5A DNA MER1_type 1 162 -27 349 233 63 31 chr5 146563925 146564084 -53066066 + L1MC5 LINE L1 7762 7925 -36 291 28 0 0 chr5 146564282 146564318 -53065832 + (TCCA)n Simple_repeat Simple_repeat 2 37 0 565 228 50 133 chr5 146564366 146564937 -53065213 - L2 LINE L2 -49 3264 2719 242 296 11 23 chr5 146566610 146566698 -53063452 - MIR SINE MIR -143 119 33 411 293 45 19 chr5 146566874 146567031 -53063119 - MIR SINE MIR -41 221 61 351 274 10 0 chr5 146567480 146567582 -53062568 + MER103 DNA DNA 21 123 -43 1898 218 29 18 chr5 146567634 146568088 -53062062 - MLT1C LTR MaLR -3 464 6 337 279 144 30 chr5 146568136 146568337 -53061813 + MIR SINE MIR 14 237 -25 242 297 27 14 chr5 146569868 146569942 -53060208 + L2 LINE L2 3234 3308 -5 2284 103 36 0 chr5 146569976 146570277 -53059873 - AluSx SINE Alu 0 312 1 3067 214 86 39 chr5 146576841 146577952 -53052198 - L1ME2 LINE L1 -22 6142 4986 2318 84 0 7 chr5 146579586 146579884 -53050266 - AluY SINE Alu -13 298 3 493 255 10 0 chr5 146580276 146580378 -53049772 - MER81 DNA DNA 0 114 12 22 0 0 0 chr5 146580956 146580978 -53049172 + AT_rich Low_complexity Low_complexity 1 22 0 297 351 9 0 chr5 146581107 146581218 -53048932 + MIR SINE MIR 18 129 -79 710 193 0 0 chr5 146581771 146581885 -53048265 - MER81 DNA DNA 0 114 1 582 257 197 0 chr5 146582806 146583024 -53047126 + MIR SINE MIR 2 262 0 1887 167 81 19 chr5 146583616 146584035 -53046115 + L1MB2 LINE L1 5726 6170 -1 304 242 0 19 chr5 146585070 146585231 -53044919 + (TCCA)n Simple_repeat Simple_repeat 3 160 0 184 337 135 28 chr5 146585233 146585485 -53044665 - L2 LINE L2 -6 3266 2988 389 294 49 0 chr5 146585669 146585812 -53044338 - MIR SINE MIR -66 196 47 2255 96 31 0 chr5 146586199 146586491 -53043659 + AluSq SINE Alu 1 301 -12 28 61 0 0 chr5 146586574 146586623 -53043527 + AT_rich Low_complexity Low_complexity 1 49 0 1518 279 76 19 chr5 146586623 146587218 -53042932 + L1MC4a LINE L1 5264 5892 -1916 843 250 78 7 chr5 146587258 146587589 -53042561 + LTR16A LTR ERVL 57 446 -4 266 348 18 0 chr5 146589383 146589495 -53040655 + (CATA)n Simple_repeat Simple_repeat 1 114 0 4476 230 41 21 chr5 146589571 146590649 -53039501 + L1ME1 LINE L1 59 1165 -5231 2130 106 40 0 chr5 146590649 146590950 -53039200 + AluSp SINE Alu 1 313 0 4476 230 41 21 chr5 146590950 146591098 -53039052 + L1ME1 LINE L1 1165 1309 -5087 2590 118 3 3 chr5 146591098 146591462 -53038688 + THE1B LTR MaLR 1 364 0 233 237 51 59 chr5 146591577 146591695 -53038455 + L1ME1 LINE L1 4714 4830 -1385 15730 193 30 10 chr5 146591697 146595790 -53034360 + L1MA3 LINE L1 2 4175 -2673 5029 168 94 41 chr5 146595793 146597808 -53032342 + L1MA3 LINE L1 4901 7001 -6 3368 218 41 33 chr5 146597807 146599238 -53030912 + L1ME1 LINE L1 4797 6231 -4 * 534 285 50 20 chr5 146601298 146601498 -53028652 - MIR SINE MIR -41 221 16 309 274 12 12 chr5 146601728 146601812 -53028338 - MIR SINE MIR -84 124 41 1410 243 21 21 chr5 146602221 146602608 -53027542 + LTR16C LTR ERVL 96 482 -9 181 231 19 39 chr5 146604192 146604244 -53025906 - L2 LINE L2 -2 3311 3261 315 0 0 0 chr5 146605252 146605287 -53024863 + (TC)n Simple_repeat Simple_repeat 2 36 0 192 286 92 0 chr5 146605716 146605814 -53024336 - MIR SINE MIR -61 147 41 5909 129 39 7 chr5 146606242 146606474 -53023676 + L1PB3 LINE L1 4873 5096 -1058 186 71 0 0 chr5 146606474 146606502 -53023648 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 5909 129 39 7 chr5 146606502 146607503 -53022647 + L1PB3 LINE L1 5096 6154 0 860 195 71 29 chr5 146608451 146608661 -53021489 + MER20 DNA MER1_type 1 219 0 747 274 41 32 chr5 146609468 146609687 -53020463 - MIR SINE MIR -37 225 5 232 272 146 48 chr5 146610661 146610764 -53019386 - L2 LINE L2 -21 3292 3180 426 310 32 25 chr5 146610819 146610977 -53019173 + MIR SINE MIR 34 192 -70 609 335 198 27 chr5 146611069 146611737 -53018413 + L3 LINE CR1 726 1507 -70 183 257 57 71 chr5 146611908 146611978 -53018172 + L3 LINE CR1 1497 1565 -12 365 298 106 6 chr5 146612021 146612182 -53017968 - MIR SINE MIR -2 260 84 2238 117 3 0 chr5 146612255 146612555 -53017595 + AluSx SINE Alu 1 301 -11 270 81 0 0 chr5 146612634 146612671 -53017479 + (TAA)n Simple_repeat Simple_repeat 3 39 0 605 273 0 0 chr5 146613793 146613925 -53016225 + MER94 DNA DNA 1 132 -2 209 333 0 0 chr5 146613965 146614019 -53016131 + MIR SINE MIR 102 155 -107 695 266 35 31 chr5 146614913 146615139 -53015011 + MIR SINE MIR 21 247 -15 218 208 56 28 chr5 146616038 146616110 -53014040 + L2 LINE L2 3196 3269 -3 808 177 27 81 chr5 146616351 146616537 -53013613 + MER45A DNA AcHobo 1 176 -2 190 220 17 34 chr5 146617512 146617571 -53012579 + L2 LINE L2 3159 3216 -56 186 43 0 0 chr5 146617711 146617734 -53012416 + (CCCTG)n Simple_repeat Simple_repeat 1 23 0 304 167 0 0 chr5 146617948 146618002 -53012148 + MIR SINE MIR 78 131 -131 2029 122 68 10 chr5 146618365 146618660 -53011490 + AluJo SINE Alu 1 312 0 504 304 47 19 chr5 146618918 146619132 -53011018 + MIR SINE MIR 28 247 -15 387 0 0 0 chr5 146620611 146620654 -53009496 + (T)n Simple_repeat Simple_repeat 1 43 0 282 160 67 27 chr5 146621006 146621081 -53009069 - MIR SINE MIR -118 144 67 336 102 0 0 chr5 146622562 146622611 -53007539 + (TG)n Simple_repeat Simple_repeat 1 49 0 506 355 40 20 chr5 146623143 146623391 -53006759 + L3 LINE CR1 1310 1562 -15 582 216 193 14 chr5 146624249 146624468 -53005682 + MIR SINE MIR 2 260 -2 221 233 0 0 chr5 146625594 146625637 -53004513 + C-rich Low_complexity Low_complexity 1 43 0 393 257 29 0 chr5 146628778 146628883 -53001267 + MIR SINE MIR 96 203 -59 382 241 19 37 chr5 146628976 146629084 -53001066 - MIR SINE MIR -98 164 59 23 0 0 0 chr5 146629544 146629567 -53000583 + AT_rich Low_complexity Low_complexity 1 23 0 846 280 76 4 chr5 146629823 146630059 -53000091 + MIR SINE MIR 7 259 -3 589 309 68 12 chr5 146630067 146630319 -52999831 - L1ME LINE L1 -297 5824 5559 508 294 25 88 chr5 146631091 146631411 -52998739 - L2 LINE L2 -17 3255 2956 506 308 163 14 chr5 146631456 146631959 -52998191 + L2 LINE L2 2728 3312 -1 285 75 0 0 chr5 146632040 146632080 -52998070 + (TG)n Simple_repeat Simple_repeat 2 41 0 334 258 105 32 chr5 146632384 146632508 -52997642 - MIR3 SINE MIR -8 200 68 562 329 92 49 chr5 146633176 146633665 -52996485 + L1ME LINE L1 5310 5819 -302 328 210 20 80 chr5 146634409 146634509 -52995641 + L2 LINE L2 3179 3272 0 479 255 121 14 chr5 146634595 146634634 -52995516 + MIR SINE MIR 107 140 -122 198 0 0 0 chr5 146634634 146634656 -52995494 + (TAA)n Simple_repeat Simple_repeat 3 24 0 479 255 121 14 chr5 146634656 146634757 -52995393 + MIR SINE MIR 140 262 0 1094 197 94 0 chr5 146634837 146635060 -52995090 - MIR SINE MIR -10 252 9 444 124 124 10 chr5 146635236 146635333 -52994817 - MER53 DNA DNA -81 108 1 360 358 51 39 chr5 146635516 146635871 -52994279 - L2 LINE L2 -339 2975 2617 1801 189 0 7 chr5 146635891 146636197 -52993953 - AluJb SINE Alu -4 308 5 242 118 39 0 chr5 146637790 146637841 -52992309 + (CAAA)n Simple_repeat Simple_repeat 4 56 0 2124 128 0 3 chr5 146638565 146638861 -52991289 - AluSx SINE Alu -14 298 4 189 125 50 25 chr5 146639399 146639439 -52990711 - L3 LINE CR1 -1373 204 164 196 250 69 42 chr5 146639788 146639860 -52990290 - MIR SINE MIR -102 106 33 284 225 102 12 chr5 146640083 146640189 -52989961 - MIR SINE MIR -54 154 70 197 324 0 15 chr5 146640171 146640239 -52989911 + L2 LINE L2 3169 3235 -37 * 232 224 159 28 chr5 146640916 146641023 -52989127 - MIR SINE MIR -55 153 33 183 114 0 0 chr5 146641529 146641564 -52988586 + (GA)n Simple_repeat Simple_repeat 1 35 0 301 304 176 0 chr5 146642813 146642915 -52987235 + L2 LINE L2 3152 3271 -1 499 255 124 12 chr5 146643263 146643424 -52986726 + MIR SINE MIR 14 192 -70 326 258 93 0 chr5 146643762 146643870 -52986280 - MIR SINE MIR -66 142 30 565 287 114 19 chr5 146644460 146644704 -52985446 + MIR SINE MIR 2 262 0 479 221 206 34 chr5 146645740 146645944 -52984206 + MIR SINE MIR 4 242 -20 197 156 44 67 chr5 146645954 146645999 -52984151 - MIR SINE MIR -146 116 73 * 322 167 0 83 chr5 146645983 146646067 -52984083 + MIR SINE MIR 156 232 -30 280 302 12 12 chr5 146646466 146646552 -52983598 - LTR67 LTR ERVL -356 201 116 2237 127 0 0 chr5 146646590 146646919 -52983231 + AluSx SINE Alu 1 329 0 254 307 70 67 chr5 146647149 146647325 -52982825 + L2 LINE L2 2366 2545 -769 2793 219 70 23 chr5 146647325 146648013 -52982137 - MER72 LTR ERV1 0 722 3 254 307 70 67 chr5 146648013 146648136 -52982014 + L2 LINE L2 2545 2666 -648 285 75 0 0 chr5 146648564 146648604 -52981546 + (TTCC)n Simple_repeat Simple_repeat 2 41 0 365 243 108 0 chr5 146649415 146649526 -52980624 + L2 LINE L2 3167 3289 -24 2345 94 0 28 chr5 146649539 146649857 -52980293 - AluSg SINE Alu 0 310 2 502 304 75 18 chr5 146650668 146650895 -52979255 + MIR SINE MIR 16 255 -7 2064 66 0 0 chr5 146651483 146651742 -52978408 - L1PA5 LINE L1 -1 6153 5895 512 265 93 7 chr5 146652885 146653036 -52977114 - MIR SINE MIR -13 249 86 257 284 165 0 chr5 146653213 146653322 -52976828 - MIR SINE MIR -75 187 61 629 271 195 0 chr5 146653667 146653877 -52976273 + MIR SINE MIR 2 252 -10 21 0 0 0 chr5 146654034 146654055 -52976095 + AT_rich Low_complexity Low_complexity 1 21 0 345 311 41 14 chr5 146655362 146655517 -52974633 - MIR SINE MIR -67 141 37 195 218 0 0 chr5 146656222 146656277 -52973873 + (CATG)n Simple_repeat Simple_repeat 2 56 0 238 333 37 0 chr5 146656304 146656385 -52973765 - L2 LINE L2 -27 3245 3162 429 294 25 43 chr5 146656724 146656956 -52973194 + MIR SINE MIR 30 250 -12 373 298 24 0 chr5 146657013 146657137 -52973013 - MER94 DNA DNA 0 134 8 264 367 39 16 chr5 146657921 146658049 -52972101 + MIR SINE MIR 20 150 -112 650 306 70 51 chr5 146658128 146658484 -52971666 - L2 LINE L2 -1 3312 2950 339 324 217 20 chr5 146658594 146658847 -52971303 + L1MC4a LINE L1 5866 6168 -1640 2011 120 60 20 chr5 146660096 146660396 -52969754 + AluSx SINE Alu 1 312 0 212 0 36 0 chr5 146660399 146660427 -52969723 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 * 1031 192 0 0 chr5 146660419 146660601 -52969549 + AluSg/x SINE Alu 121 302 -10 374 305 96 50 chr5 146660619 146661121 -52969029 + L1ME4a LINE L1 4021 4545 -1601 * 14328 171 50 29 chr5 146661119 146663618 -52966532 - L1MA4A LINE L1 -4 7001 4556 2188 132 132 5 chr5 146663618 146663998 -52966152 + MSTA LTR MaLR 1 428 0 9531 169 15 13 chr5 146663998 146665644 -52964506 + MSTA-int LTR MaLR 1 1650 -1 14328 171 50 29 chr5 146665644 146669950 -52960200 - L1MA4A LINE L1 -2448 4557 1 454 289 243 0 chr5 146670021 146670194 -52959956 + MIR SINE MIR 48 262 0 346 342 87 17 chr5 146670234 146670465 -52959685 + L1ME4a LINE L1 4590 4836 -1310 255 226 128 20 chr5 146670592 146670694 -52959456 + MER5A DNA MER1_type 1 113 -76 1734 264 78 29 chr5 146670832 146671636 -52958514 + L1ME4a LINE L1 5267 6110 -11 264 264 73 84 chr5 146672431 146672609 -52957541 + MIR SINE MIR 86 261 -1 286 229 31 31 chr5 146673334 146673430 -52956720 - MER113 DNA MER1_type? -425 96 1 202 311 126 0 chr5 146674025 146674144 -52956006 - L2 LINE L2 -215 3057 2924 195 139 0 0 chr5 146675414 146675450 -52954700 + (TG)n Simple_repeat Simple_repeat 1 36 0 1276 233 91 47 chr5 146675994 146676487 -52953663 + LTR33A LTR ERVL 9 523 0 206 147 29 103 chr5 146676949 146677017 -52953133 - L2 LINE L2 -220 3052 2990 210 219 0 0 chr5 146677634 146677675 -52952475 + CT-rich Low_complexity Low_complexity 2 42 0 1186 225 44 72 chr5 146678397 146678828 -52951322 - LTR16C LTR ERVL -72 419 1 2313 107 7 0 chr5 146679465 146679775 -52950375 - AluSx SINE Alu 0 312 1 386 343 52 33 chr5 146681019 146681381 -52948769 - L2 LINE L2 -483 2831 2463 1407 190 78 43 chr5 146682150 146682523 -52947627 + MLT1B LTR MaLR 1 386 -4 22 56 0 0 chr5 146682747 146682783 -52947367 + AT_rich Low_complexity Low_complexity 1 36 0 321 266 19 91 chr5 146684375 146684468 -52945682 - L3 LINE CR1 -28 1549 1470 1118 203 14 0 chr5 146684468 146684675 -52945475 + MER63A DNA MER1_type 1 210 0 321 266 19 91 chr5 146684675 146684735 -52945415 - L3 LINE CR1 -107 1470 1407 282 244 109 42 chr5 146685066 146685185 -52944965 - L2 LINE L2 -5 3267 3141 252 0 0 0 chr5 146686721 146686749 -52943401 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1148 221 146 65 chr5 146686827 146687212 -52942938 + HsTC2c DNA Tc2 4 419 -310 984 215 141 11 chr5 146687367 146687651 -52942499 + HsTC2c DNA Tc2 404 724 -5 1169 279 80 16 chr5 146688690 146689379 -52940771 + L1MEc LINE L1 722 1454 -4942 2470 226 21 21 chr5 146689382 146690040 -52940110 + L1M4 LINE L1 3654 4311 -1835 383 316 36 0 chr5 146690070 146690238 -52939912 - L2 LINE L2 -1006 2308 2135 630 237 150 10 chr5 146692656 146692863 -52937287 - MIR SINE MIR -7 255 20 513 300 157 14 chr5 146693379 146693589 -52936561 - MIR SINE MIR -3 259 20 374 235 31 0 chr5 146695361 146695459 -52934691 + MIR SINE MIR 111 211 -51 360 0 0 0 chr5 146695537 146695577 -52934573 + (TA)n Simple_repeat Simple_repeat 1 40 0 2306 118 43 109 chr5 146695583 146696067 -52934083 + L1MA9 LINE L1 5859 6310 -2 556 215 44 19 chr5 146696100 146696258 -52933892 - L1MD3 LINE L1 -136 7859 7698 310 254 45 9 chr5 146697415 146697525 -52932625 + MIR SINE MIR 22 135 -73 305 314 38 19 chr5 146698436 146698595 -52931555 - L2 LINE L2 -202 3070 2909 1630 190 103 112 chr5 146699874 146700641 -52929509 + LTR41 LTR ERVL 3 762 -11 4098 257 32 12 chr5 146700644 146701758 -52928392 + ERVL LTR ERVL 3799 5015 -749 1621 196 80 30 chr5 146701758 146702131 -52928019 + MSTD LTR MaLR 5 396 0 4098 257 32 12 chr5 146702131 146702525 -52927625 + ERVL LTR ERVL 5015 5400 -364 514 310 33 16 chr5 146703080 146703264 -52926886 - ERVL LTR ERVL -970 4794 4608 657 260 9 40 chr5 146703275 146703498 -52926652 - MLT2F LTR ERVL 0 663 448 1405 161 103 0 chr5 146703507 146703749 -52926401 + MLT2C1 LTR ERVL 2 268 -129 245 303 11 45 chr5 146703765 146703854 -52926296 + L2 LINE L2 3213 3298 -15 503 239 15 15 chr5 146704165 146704295 -52925855 - MIR SINE MIR -35 227 98 1973 183 62 33 chr5 146705443 146705897 -52924253 + MLT1C LTR MaLR 1 467 0 819 140 168 0 chr5 146706775 146706918 -52923232 - MSTA LTR MaLR -261 167 1 9115 139 30 38 chr5 146706922 146708509 -52921641 - MSTA-int LTR MaLR -4 1576 3 2174 133 127 16 chr5 146708512 146708897 -52921253 - MSTA LTR MaLR 0 428 1 924 163 82 0 chr5 146709045 146709229 -52920921 - L1MD1 LINE L1 0 6242 6044 269 219 16 0 chr5 146709231 146709295 -52920855 - L1MD1 LINE L1 -352 6007 5943 644 290 18 22 chr5 146709413 146709629 -52920521 + MIR SINE MIR 2 216 -46 468 179 248 0 chr5 146709629 146709774 -52920376 - MER5A DNA MER1_type 0 189 9 270 125 21 0 chr5 146709783 146709831 -52920319 + MIR SINE MIR 210 258 -4 655 296 139 53 chr5 146710527 146711135 -52919015 - L1MC4a LINE L1 -104 6017 5356 194 231 0 0 chr5 146711483 146711522 -52918628 + MIR SINE MIR 33 71 -191 974 202 56 28 chr5 146712191 146712404 -52917746 - MER20 DNA MER1_type 0 219 1 5603 130 38 6 chr5 146713344 146714345 -52915805 - L1PB3 LINE L1 0 6154 5096 186 71 0 0 chr5 146714345 146714373 -52915777 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 5603 130 38 6 chr5 146714373 146714605 -52915545 - L1PB3 LINE L1 -1058 5096 4873 237 253 131 23 chr5 146715033 146715161 -52914989 + MIR SINE MIR 41 181 -61 315 0 0 0 chr5 146715560 146715595 -52914555 + (GA)n Simple_repeat Simple_repeat 2 36 0 204 280 10 80 chr5 146716555 146716655 -52913495 + L2 LINE L2 3219 3311 -2 206 341 136 30 chr5 146717434 146717566 -52912584 - L2 LINE L2 -17 3255 3110 1312 243 21 21 chr5 146718239 146718626 -52911524 - LTR16C LTR ERVL -9 482 96 339 274 12 12 chr5 146719036 146719120 -52911030 + MIR SINE MIR 41 124 -84 626 299 47 19 chr5 146719350 146719564 -52910586 + MIR SINE MIR 16 235 -27 3113 219 41 33 chr5 146721611 146723042 -52907108 - L1ME1 LINE L1 -4 6162 4728 * 4708 169 94 41 chr5 146723041 146725056 -52905094 - L1MA3 LINE L1 -6 6299 4199 2964 208 43 8 chr5 146725059 146725822 -52904328 - L1MA3 LINE L1 -2673 3473 2684 326 258 93 0 chr5 146725897 146726005 -52904145 + MIR SINE MIR 30 153 -66 499 255 124 12 chr5 146726343 146726504 -52903646 - MIR SINE MIR -70 192 14 301 304 176 0 chr5 146726852 146726954 -52903196 - L2 LINE L2 -1 3271 3152 183 114 0 0 chr5 146728203 146728238 -52901912 + (TC)n Simple_repeat Simple_repeat 1 35 0 232 224 159 28 chr5 146728744 146728851 -52901299 + MIR SINE MIR 33 153 -55 197 324 0 15 chr5 146729528 146729596 -52900554 - L2 LINE L2 -37 3235 3169 * 284 225 102 12 chr5 146729578 146729684 -52900466 + MIR SINE MIR 70 184 -54 196 250 69 42 chr5 146729907 146729979 -52900171 + MIR SINE MIR 33 106 -102 189 125 50 25 chr5 146730328 146730368 -52899782 + L3 LINE CR1 164 204 -1373 2124 128 0 3 chr5 146730906 146731202 -52898948 + AluSx SINE Alu 4 298 -14 242 118 39 0 chr5 146731926 146731977 -52898173 + (TTTG)n Simple_repeat Simple_repeat 4 56 0 1801 189 0 7 chr5 146733570 146733876 -52896274 + AluJb SINE Alu 5 308 -4 360 358 51 39 chr5 146733896 146734251 -52895899 + L2 LINE L2 2617 2975 -339 444 124 124 10 chr5 146734434 146734531 -52895619 + MER53 DNA DNA 1 108 -81 1094 197 94 0 chr5 146734707 146734930 -52895220 + MIR SINE MIR 9 252 -10 479 255 121 14 chr5 146735010 146735111 -52895039 - MIR SINE MIR 0 262 140 198 0 0 0 chr5 146735111 146735133 -52895017 + (TTA)n Simple_repeat Simple_repeat 3 24 0 479 255 121 14 chr5 146735133 146735172 -52894978 - MIR SINE MIR -122 140 107 328 210 20 80 chr5 146735258 146735358 -52894792 - L2 LINE L2 0 3272 3179 551 331 92 49 chr5 146736102 146736591 -52893559 - L1ME LINE L1 -302 5819 5310 334 258 105 32 chr5 146737259 146737383 -52892767 + MIR3 SINE MIR 68 200 -8 285 75 0 0 chr5 146737687 146737727 -52892423 + (CA)n Simple_repeat Simple_repeat 2 41 0 487 309 163 14 chr5 146737808 146738311 -52891839 - L2 LINE L2 -1 3312 2728 508 294 25 88 chr5 146738356 146738676 -52891474 + L2 LINE L2 2956 3255 -17 589 309 68 12 chr5 146739448 146739700 -52890450 + L1ME LINE L1 5559 5824 -297 846 280 76 4 chr5 146739708 146739944 -52890206 - MIR SINE MIR -3 259 7 23 0 0 0 chr5 146740200 146740223 -52889927 + AT_rich Low_complexity Low_complexity 1 23 0 382 241 19 37 chr5 146740683 146740791 -52889359 + MIR SINE MIR 59 164 -98 393 257 29 0 chr5 146740884 146740989 -52889161 - MIR SINE MIR -59 203 96 221 233 0 0 chr5 146744130 146744173 -52885977 + G-rich Low_complexity Low_complexity 1 43 0 582 216 193 14 chr5 146745299 146745518 -52884632 - MIR SINE MIR -2 260 2 506 355 40 20 chr5 146746376 146746624 -52883526 - L3 LINE CR1 -15 1562 1310 336 102 0 0 chr5 146747156 146747205 -52882945 + (CA)n Simple_repeat Simple_repeat 1 49 0 282 160 67 27 chr5 146748686 146748761 -52881389 + MIR SINE MIR 67 144 -118 378 0 0 0 chr5 146749113 146749155 -52880995 + (A)n Simple_repeat Simple_repeat 1 42 0 504 304 47 19 chr5 146750634 146750848 -52879302 - MIR SINE MIR -15 247 28 2029 122 68 10 chr5 146751106 146751401 -52878749 - AluJo SINE Alu 0 312 1 304 167 0 0 chr5 146751764 146751818 -52878332 - MIR SINE MIR -131 131 78 186 43 0 0 chr5 146752032 146752055 -52878095 + (CAGGG)n Simple_repeat Simple_repeat 1 23 0 190 220 17 34 chr5 146752195 146752254 -52877896 - L2 LINE L2 -56 3216 3159 808 177 27 81 chr5 146753229 146753415 -52876735 - MER45A DNA AcHobo -2 176 1 218 208 56 28 chr5 146753656 146753728 -52876422 - L2 LINE L2 -3 3269 3196 695 266 35 31 chr5 146754627 146754853 -52875297 - MIR SINE MIR -15 247 21 209 333 0 0 chr5 146755747 146755801 -52874349 - MIR SINE MIR -107 155 102 605 273 0 0 chr5 146755841 146755973 -52874177 - MER94 DNA DNA -2 132 1 270 81 0 0 chr5 146757095 146757132 -52873018 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2248 116 3 0 chr5 146757211 146757512 -52872638 - AluSx SINE Alu -10 302 1 453 289 78 12 chr5 146757586 146757752 -52872398 + MIR SINE MIR 84 260 -2 183 257 57 71 chr5 146757796 146757866 -52872284 - L3 LINE CR1 -12 1565 1497 609 335 198 27 chr5 146758039 146758707 -52871443 - L3 LINE CR1 -70 1507 726 431 324 40 23 chr5 146758783 146758959 -52871191 - MIR SINE MIR -50 212 34 232 272 146 48 chr5 146759014 146759117 -52871033 + L2 LINE L2 3180 3292 -21 747 274 41 32 chr5 146760092 146760311 -52869839 + MIR SINE MIR 5 225 -37 446 312 65 0 chr5 146761096 146761250 -52868900 - MIR SINE MIR -6 256 93 653 294 63 35 chr5 146761326 146761720 -52868430 + MLT1K LTR MaLR 134 538 -50 271 295 73 24 chr5 146762038 146762234 -52867916 + L1ME LINE L1 5557 5765 -356 265 336 84 38 chr5 146762341 146762579 -52867571 - MIR SINE MIR -10 252 4 244 345 138 14 chr5 146762715 146762860 -52867290 - MIR SINE MIR -14 248 86 213 309 62 0 chr5 146763082 146763179 -52866971 - MIR SINE MIR -37 225 123 2702 107 0 3 chr5 146763965 146764330 -52865820 + THE1B LTR MaLR 1 364 0 236 30 30 0 chr5 146764530 146764563 -52865587 + (CAT)n Simple_repeat Simple_repeat 2 35 0 392 323 118 10 chr5 146764564 146764783 -52865367 - MIR SINE MIR -6 256 15 1409 148 19 11 chr5 146765125 146765338 -52864812 + L1MC3 LINE L1 7410 7628 -157 2296 98 0 0 chr5 146765338 146765647 -52864503 + AluSx SINE Alu 1 309 0 1409 148 19 11 chr5 146765647 146765703 -52864447 + L1MC3 LINE L1 7628 7682 -103 2086 118 3 33 chr5 146765703 146766007 -52864143 + AluSx SINE Alu 1 295 -17 569 157 0 0 chr5 146766131 146766214 -52863936 - AluJ/FLAM SINE Alu -228 84 2 22 35 0 0 chr5 146767279 146767308 -52862842 + AT_rich Low_complexity Low_complexity 1 29 0 247 209 45 30 chr5 146767918 146767985 -52862165 - MIR3 SINE MIR -27 181 114 345 251 275 0 chr5 146768295 146768462 -52861688 - L1MC4a LINE L1 -1922 5886 5674 627 335 69 4 chr5 146769122 146769367 -52860783 + MIR SINE MIR 1 261 -1 2189 103 0 0 chr5 146769438 146769720 -52860430 - AluSx SINE Alu -10 302 21 663 294 100 24 chr5 146769737 146770118 -52860032 + L2 LINE L2 2881 3290 -23 486 248 128 79 chr5 146770975 146771522 -52858628 - L2 LINE L2 -7 3265 2714 580 261 58 34 chr5 146772305 146772512 -52857638 + MIR SINE MIR 13 224 -38 24 32 0 0 chr5 146776101 146776132 -52854018 + GC_rich Low_complexity Low_complexity 1 31 0 1153 31 0 0 chr5 146776435 146776612 -52853538 - AluSp/q SINE Alu 0 332 156 21 0 0 0 chr5 146777068 146777089 -52853061 + GC_rich Low_complexity Low_complexity 1 21 0 210 222 0 0 chr5 146777246 146777291 -52852859 + (CGG)n Simple_repeat Simple_repeat 3 47 0 23 0 0 0 chr5 146780227 146780250 -52849900 + AT_rich Low_complexity Low_complexity 1 23 0 673 305 48 0 chr5 146781251 146781438 -52848712 - MER91A DNA MER1_type 0 196 1 228 246 33 33 chr5 146781803 146781864 -52848286 + L2 LINE L2 3251 3311 -2 258 340 63 25 chr5 146781875 146782034 -52848116 + MIR3 SINE MIR 23 187 -21 231 246 0 0 chr5 146782083 146782140 -52848010 + L2 LINE L2 3194 3250 -22 248 279 0 54 chr5 146782225 146782336 -52847814 - LTR67 LTR ERVL -25 532 428 1363 224 58 42 chr5 146782671 146783123 -52847027 + MLT1C LTR MaLR 1 459 -8 29 78 0 0 chr5 146783988 146784052 -52846098 + AT_rich Low_complexity Low_complexity 1 64 0 413 323 92 7 chr5 146784340 146784521 -52845629 - MIR SINE MIR -51 211 14 28 29 0 0 chr5 146785321 146785356 -52844794 + GC_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr5 146787258 146787278 -52842872 + (CA)n Simple_repeat Simple_repeat 2 21 0 1629 158 97 4 chr5 146787601 146787880 -52842270 + AluJb SINE Alu 1 305 -7 2162 131 0 3 chr5 146789267 146789565 -52840585 - AluSx SINE Alu -15 297 1 1111 268 117 38 chr5 146789661 146790113 -52840037 - L2 LINE L2 -2 3311 2896 2089 131 62 28 chr5 146790113 146790465 -52839685 + THE1B LTR MaLR 1 364 0 1111 268 117 38 chr5 146790465 146790822 -52839328 - L2 LINE L2 -417 2896 2429 1846 118 118 44 chr5 146790922 146791261 -52838889 - THE1B LTR MaLR 0 364 1 852 270 47 9 chr5 146791443 146791654 -52838496 - MIR SINE MIR -21 241 23 266 308 10 0 chr5 146792746 146792850 -52837300 + MLT1I LTR MaLR 65 169 -240 2683 148 7 30 chr5 146792944 146793378 -52836772 - MSTB LTR MaLR 0 426 3 275 164 75 30 chr5 146793398 146793465 -52836685 + LTR16C LTR ERVL 422 491 0 329 318 107 46 chr5 146793594 146793874 -52836276 + L2 LINE L2 2848 3144 -128 1515 191 25 44 chr5 146794354 146794669 -52835481 - AluJo SINE Alu -3 309 1 488 279 34 14 chr5 146794711 146794858 -52835292 + MLT1J2 LTR MaLR 8 157 -293 3309 247 70 68 chr5 146794892 146795988 -52834162 + L1ME1 LINE L1 23 1115 -5705 2286 149 13 13 chr5 146795988 146796363 -52833787 + THE1C LTR MaLR 1 375 0 10483 102 50 12 chr5 146796363 146797886 -52832264 + THE1C-int LTR MaLR 1 1580 0 2225 152 30 6 chr5 146797886 146798249 -52831901 + THE1C LTR MaLR 1 372 -3 3309 247 70 68 chr5 146798249 146799043 -52831107 + L1ME1 LINE L1 1114 1933 -4887 2374 149 73 5 chr5 146799061 146799456 -52830694 + MSTB LTR MaLR 5 426 0 975 156 26 0 chr5 146799456 146799610 -52830540 + FRAM SINE Alu 11 168 -8 767 273 12 30 chr5 146799624 146799954 -52830196 + L1ME1 LINE L1 2137 2460 -4662 4312 168 40 12 chr5 146799961 146800736 -52829414 + MER21B LTR ERV1 1 797 -66 5908 243 55 23 chr5 146800809 146801722 -52828428 + L1ME1 LINE L1 2467 3350 -3591 2445 89 0 3 chr5 146801722 146802025 -52828125 + AluY SINE Alu 1 302 -9 5908 243 55 23 chr5 146802025 146802973 -52827177 + L1ME1 LINE L1 3350 4383 -2558 1267 206 19 124 chr5 146802973 146803391 -52826759 - MLT1A2 LTR MaLR 0 374 1 5908 243 55 23 chr5 146803391 146804057 -52826093 + L1ME1 LINE L1 4383 5026 -1915 1129 211 146 13 chr5 146804054 146804437 -52825713 + L1ME1 LINE L1 5470 5903 -1038 * 853 148 93 148 chr5 146804438 146804466 -52825684 + AluJo SINE Alu 87 115 -197 198 0 0 0 chr5 146804466 146804488 -52825662 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 853 148 93 148 chr5 146804488 146804696 -52825454 + AluJo SINE Alu 115 310 -2 2501 211 77 35 chr5 146804696 146805665 -52824485 + L1ME1 LINE L1 5927 6955 -6 897 189 148 23 chr5 146805797 146806061 -52824089 + MER5C DNA MER1_type 27 323 -1 461 232 53 20 chr5 146806061 146806246 -52823904 + MLT1J2 LTR MaLR 256 506 -5 1583 144 44 86 chr5 146806558 146806802 -52823348 - MER7A DNA MER2_type -2692 346 93 2411 86 10 0 chr5 146806802 146807104 -52823046 + AluSx SINE Alu 1 305 -7 1583 144 44 86 chr5 146807104 146807129 -52823021 - MER7A DNA MER2_type -2945 93 69 2040 125 0 4 chr5 146807129 146807436 -52822714 + AluSg SINE Alu 1 306 0 2523 73 0 0 chr5 146807446 146807747 -52822403 + AluY SINE Alu 1 301 -10 1583 144 44 86 chr5 146807747 146807826 -52822324 - MER7A DNA MER2_type -2978 60 2 488 241 64 40 chr5 146807995 146808196 -52821954 + MIR SINE MIR 42 259 -3 441 278 80 16 chr5 146808502 146808701 -52821449 - MIR SINE MIR -50 212 6 283 176 162 0 chr5 146808810 146808878 -52821272 + MER116 DNA Mariner 1 79 -1 503 295 200 9 chr5 146808879 146809089 -52821061 - MIR SINE MIR -5 257 8 2525 75 0 3 chr5 146809128 146809434 -52820716 - AluY SINE Alu -6 305 1 227 275 163 0 chr5 146809509 146809549 -52820601 - L2 LINE L2 0 3313 3281 1908 203 76 11 chr5 146809549 146809983 -52820167 + LTR40b LTR ERVL 1 462 0 227 275 163 0 chr5 146809983 146810022 -52820128 - L2 LINE L2 -32 3281 3221 183 229 0 0 chr5 146810194 146810229 -52819921 - L2 LINE L2 -13 3259 3225 891 282 175 16 chr5 146810296 146810736 -52819414 - L2 LINE L2 0 3313 2804 1074 219 5 0 chr5 146812579 146812784 -52817366 - L1PA16 LINE L1 -17 6149 5944 2015 145 26 0 chr5 146812901 146813205 -52816945 - AluSx SINE Alu 0 312 1 418 291 218 2 chr5 146813282 146813478 -52816672 - MIR SINE MIR 0 262 23 191 283 0 0 chr5 146813558 146813604 -52816546 - L2 LINE L2 -14 3258 3213 1859 240 39 2 chr5 146813973 146814435 -52815715 - L1ME1 LINE L1 -5 6161 5683 1152 59 0 0 chr5 146814437 146814573 -52815577 - AluSg/x SINE Alu -9 301 166 1884 186 0 8 chr5 146814577 146814949 -52815201 - L1ME1 LINE L1 -488 5676 5308 620 252 177 25 chr5 146815108 146815242 -52814908 - L1ME1 LINE L1 -813 5333 5221 2052 149 0 9 chr5 146815242 146815557 -52814593 - AluJb SINE Alu 0 312 1 620 252 177 25 chr5 146815557 146815739 -52814411 - L1ME1 LINE L1 -925 5221 4969 2269 123 0 3 chr5 146815765 146816067 -52814083 - AluSx SINE Alu -11 301 1 711 203 101 0 chr5 146818077 146818235 -52811915 + LTR16A1 LTR ERVL 284 457 0 817 281 93 12 chr5 146818979 146819313 -52810837 + L1ME3A LINE L1 5526 5886 -284 1536 224 58 37 chr5 146819363 146819797 -52810353 + MLT1C LTR MaLR 24 466 -1 3005 131 80 2 chr5 146819804 146820293 -52809857 - MER1A DNA MER1_type 0 527 1 2134 112 7 0 chr5 146820515 146820883 -52809267 - AluSq SINE Alu 0 373 4 373 286 97 20 chr5 146820887 146821083 -52809067 - MIR SINE MIR -48 214 4 515 277 9 0 chr5 146821516 146821628 -52808522 - MER81 DNA DNA 0 114 2 205 333 51 8 chr5 146823460 146823577 -52806573 + L2 LINE L2 2609 2730 -584 239 357 82 45 chr5 146823703 146823994 -52806156 + L2 LINE L2 2920 3221 -51 307 259 42 35 chr5 146824280 146824423 -52805727 - MIR SINE MIR -13 249 106 23 0 0 0 chr5 146824515 146824538 -52805612 + AT_rich Low_complexity Low_complexity 1 23 0 341 259 95 32 chr5 146824693 146824851 -52805299 - L2 LINE L2 0 3313 3146 2252 223 14 14 chr5 146824865 146824967 -52805183 + MLT1F LTR MaLR 1 102 -440 2514 92 20 0 chr5 146824967 146825315 -52804835 + THE1A LTR MaLR 1 355 0 2252 223 14 14 chr5 146825315 146825710 -52804440 + MLT1F LTR MaLR 101 498 -44 322 226 157 9 chr5 146829378 146829493 -52800657 + MIR SINE MIR 26 157 -105 210 227 0 0 chr5 146831751 146831795 -52798355 + C-rich Low_complexity Low_complexity 1 44 0 192 77 0 0 chr5 146832982 146833008 -52797142 + (CA)n Simple_repeat Simple_repeat 2 27 0 235 296 14 0 chr5 146834018 146834089 -52796061 + MIR SINE MIR 117 188 -74 319 156 125 86 chr5 146834258 146834386 -52795764 - MIR SINE MIR -107 155 23 244 247 55 14 chr5 146835207 146835280 -52794870 - MIR3 SINE MIR -45 163 88 451 155 0 48 chr5 146835325 146835409 -52794741 + Tigger3(Golem) DNA MER2_type 1 80 -2949 22 0 0 0 chr5 146835509 146835531 -52794619 + AT_rich Low_complexity Low_complexity 1 22 0 522 189 38 0 chr5 146835536 146835642 -52794508 + Tigger3(Golem) DNA MER2_type 2919 3028 -1 2390 76 0 20 chr5 146836474 146836775 -52793375 + AluY SINE Alu 1 295 -16 387 0 0 0 chr5 146837224 146837267 -52792883 + (TTTTG)n Simple_repeat Simple_repeat 5 47 0 633 212 118 6 chr5 146837351 146837521 -52792629 + MIR SINE MIR 63 251 -11 279 221 13 4 chr5 146838604 146838838 -52791312 + (CA)n Simple_repeat Simple_repeat 1 236 0 204 264 17 0 chr5 146838888 146839062 -52791088 + (CA)n Simple_repeat Simple_repeat 1 177 0 201 300 43 14 chr5 146839340 146839410 -52790740 + L2 LINE L2 2744 2815 -499 207 182 0 0 chr5 146839471 146839504 -52790646 + (CA)n Simple_repeat Simple_repeat 2 34 0 2753 36 0 0 chr5 146839591 146839898 -52790252 - AluY SINE Alu -4 307 1 821 183 151 0 chr5 146840366 146840556 -52789594 + MIR SINE MIR 45 262 0 591 285 88 62 chr5 146841004 146841264 -52788886 + MLT1K LTR MaLR 213 479 -109 407 230 0 81 chr5 146842223 146842371 -52787779 - MER112 DNA MER1_type -40 220 85 207 0 0 0 chr5 146842371 146842394 -52787756 + (TG)n Simple_repeat Simple_repeat 2 24 0 183 156 0 0 chr5 146843684 146843716 -52786434 + GA-rich Low_complexity Low_complexity 3 34 0 3158 148 22 22 chr5 146844605 146844657 -52785493 - L1MB3 LINE L1 0 6183 6132 2236 112 3 3 chr5 146844657 146844952 -52785198 - AluSq SINE Alu -18 295 1 3158 148 22 22 chr5 146844952 146845488 -52784662 - L1MB3 LINE L1 -50 6133 5595 529 306 32 5 chr5 146847081 146847267 -52782883 - L2 LINE L2 -3 3310 3120 860 295 51 28 chr5 146847311 146847664 -52782486 + MLT1I LTR MaLR 35 395 -14 1983 144 3 28 chr5 146847664 146847984 -52782166 - AluJb SINE Alu 0 312 1 1400 150 147 12 chr5 146848047 146848381 -52781769 - Charlie1 DNA MER1_type -40 2721 2343 258 240 13 67 chr5 146848379 146848454 -52781696 - Charlie1 DNA MER1_type -2690 71 1 * 4963 199 63 72 chr5 146849258 146849496 -52780654 - L1MC4 LINE L1 0 8042 7804 2328 78 0 0 chr5 146849496 146849808 -52780342 - AluSc SINE Alu 0 312 1 4963 199 63 72 chr5 146849808 146851375 -52778775 - L1MC4 LINE L1 -238 7804 6172 225 310 0 0 chr5 146854412 146854483 -52775667 + L2 LINE L2 3200 3270 -2 534 209 87 26 chr5 146854961 146855113 -52775037 + MIR SINE MIR 26 184 -63 1634 156 27 40 chr5 146855929 146856230 -52773920 + AluJb SINE Alu 14 310 -2 441 298 35 0 chr5 146856310 146856451 -52773699 - MIR SINE MIR -82 180 35 206 327 156 30 chr5 146856768 146856967 -52773183 + L2 LINE L2 2739 2962 -352 727 237 66 40 chr5 146857135 146857363 -52772787 + MLT1D LTR MaLR 2 235 -270 562 245 108 56 chr5 146857564 146857833 -52772317 - MER102a DNA MER1_type -1 329 47 198 235 183 92 chr5 146860272 146860425 -52769725 - L3 LINE CR1 -134 1443 1277 1088 232 66 48 chr5 146860557 146861014 -52769136 + MLT1C LTR MaLR 1 465 -2 1134 148 0 0 chr5 146861139 146861308 -52768842 - AluSg/x SINE Alu -12 300 132 268 255 124 28 chr5 146861585 146861730 -52768420 + MIR SINE MIR 104 262 0 2488 182 86 2 chr5 146861779 146862302 -52767848 + L1MD2 LINE L1 5792 6358 -1 1070 103 0 0 chr5 146864165 146864310 -52765840 - AluSg/x SINE Alu -4 308 164 2353 107 7 3 chr5 146864324 146864634 -52765516 - AluSx SINE Alu -1 311 1 467 264 41 51 chr5 146865661 146865858 -52764292 + MIR SINE MIR 49 243 -19 195 69 0 0 chr5 146866483 146866512 -52763638 + (TC)n Simple_repeat Simple_repeat 2 30 0 306 0 0 0 chr5 146866512 146866546 -52763604 + (CA)n Simple_repeat Simple_repeat 1 34 0 455 247 104 28 chr5 146867298 146867480 -52762670 - MIR SINE MIR -2 260 65 301 281 11 0 chr5 146867748 146867837 -52762313 - MIR SINE MIR -80 128 39 415 285 256 9 chr5 146868278 146868618 -52761532 - L2 LINE L2 -4 3309 2886 5739 132 31 5 chr5 146869367 146870294 -52759856 - L1MD1 LINE L1 -2 6240 5290 220 140 18 18 chr5 146870316 146870373 -52759777 + (TA)n Simple_repeat Simple_repeat 2 58 0 2400 219 59 8 chr5 146870432 146871075 -52759075 - L1MD1 LINE L1 -881 5265 4590 2222 97 3 3 chr5 146871105 146871404 -52758746 + AluSx SINE Alu 1 299 -13 230 336 26 0 chr5 146871701 146871814 -52758336 - L1ME LINE L1 -383 5738 5623 516 59 0 0 chr5 146871959 146872027 -52758123 + (CA)n Simple_repeat Simple_repeat 2 69 0 2138 131 47 36 chr5 146873343 146873703 -52756447 + THE1B LTR MaLR 1 364 0 2063 58 4 0 chr5 146873707 146873965 -52756185 + THE1B-int LTR MaLR 6 264 -1316 279 294 161 0 chr5 146873970 146874113 -52756037 - MIR SINE MIR -92 170 5 1984 105 44 9 chr5 146874130 146874516 -52755634 - LTR7 LTR ERV1 -2 448 1 1187 79 17 28 chr5 146874516 146874694 -52755456 - HERVH LTR ERV1 0 7713 7538 708 176 279 98 chr5 146974708 146975095 -52655055 + SATR1 Satellite Satellite 12 468 -2 758 172 317 60 chr5 146975121 146975520 -52654630 + SATR1 Satellite Satellite 1 501 -373 1131 65 0 7 chr5 146975520 146975658 -52654492 - AluSq/x SINE Alu -176 137 1 1506 226 35 35 chr5 146975660 146976093 -52654057 - L1ME LINE L1 -890 5256 4824 1885 134 28 24 chr5 146976105 146976395 -52653755 - AluJo SINE Alu -21 291 1 466 267 116 42 chr5 146976397 146976682 -52653468 + MLT1I LTR MaLR 104 409 0 750 257 157 71 chr5 146976767 146977246 -52652904 - MLT1H LTR MaLR -28 521 2 487 228 53 0 chr5 146977341 146977455 -52652695 + MLT1H LTR MaLR 75 194 -355 314 235 0 0 chr5 146977639 146977707 -52652443 + MLT1H LTR MaLR 479 546 -3 2436 176 101 8 chr5 147077892 147081263 -52548887 - SATR1 Satellite Satellite 0 5823 1595 1764 41 0 0 chr5 147081263 147081459 -52548691 + AluY SINE Alu 1 196 -115 2436 176 101 8 chr5 147081459 147083219 -52546931 - SATR1 Satellite Satellite -4228 1595 1 2557 146 97 44 chr5 147183219 147184867 -52445283 + SATR1 Satellite Satellite 1 1735 -25 2109 206 188 69 chr5 147184883 147187866 -52442284 - SATR1 Satellite Satellite -4 3336 1 885 203 170 73 chr5 147187879 147188274 -52441876 + SATR1 Satellite Satellite 37 469 -1 985 226 226 34 chr5 147188302 147188892 -52441258 + SATR1 Satellite Satellite 1 703 -3 1210 208 196 62 chr5 147188904 147189687 -52440463 + SATR1 Satellite Satellite 1 887 -94 25 31 0 0 chr5 147190228 147190260 -52439890 + AT_rich Low_complexity Low_complexity 1 32 0 24 32 0 0 chr5 147190490 147190521 -52439629 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr5 147191629 147191659 -52438491 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 147191689 147191722 -52438428 + AT_rich Low_complexity Low_complexity 1 33 0 282 284 147 0 chr5 147192099 147192215 -52437935 + MIR SINE MIR 126 258 -4 1677 160 10 3 chr5 147192464 147192757 -52437393 + AluJo SINE Alu 1 295 -17 276 343 14 0 chr5 147192841 147192911 -52437239 - L2 LINE L2 -50 3222 3152 1227 233 105 12 chr5 147192934 147193277 -52436873 - L1ME1 LINE L1 -5 6161 5787 1571 190 0 3 chr5 147193287 147193577 -52436573 - AluJb SINE Alu -17 295 7 408 229 34 34 chr5 147193922 147194040 -52436110 + MLT1J LTR MaLR 390 507 -4 2363 143 68 5 chr5 147194690 147195132 -52435018 + L1MA8 LINE L1 5817 6286 -5 1972 134 0 0 chr5 147195245 147195557 -52434593 + AluSx SINE Alu 1 312 0 22 0 0 0 chr5 147195589 147195611 -52434539 + AT_rich Low_complexity Low_complexity 1 22 0 1598 80 0 9 chr5 147195611 147195835 -52434315 - L1MA3 LINE L1 0 6305 6084 2126 158 3 15 chr5 147198591 147198932 -52431218 - MER1B DNA MER1_type 0 337 1 21 0 0 0 chr5 147199282 147199303 -52430847 + AT_rich Low_complexity Low_complexity 1 21 0 2121 128 46 22 chr5 147199355 147199721 -52430429 - THE1C LTR MaLR 0 375 1 619 311 38 13 chr5 147199848 147200086 -52430064 + MIR SINE MIR 7 250 -12 553 281 21 5 chr5 147200111 147200303 -52429847 + L1ME1 LINE L1 36 230 -6166 22 56 0 0 chr5 147200446 147200482 -52429668 + AT_rich Low_complexity Low_complexity 1 36 0 1618 238 80 14 chr5 147200489 147200546 -52429604 + L1ME1 LINE L1 4765 4817 -1398 1135 176 9 36 chr5 147200546 147200767 -52429383 + MER20 DNA MER1_type 1 215 -4 1618 238 80 14 chr5 147200767 147201296 -52428854 + L1ME1 LINE L1 4817 5399 -816 1613 257 64 60 chr5 147201310 147201489 -52428661 + L1ME1 LINE L1 155 332 -5883 675 90 0 0 chr5 147201489 147201589 -52428561 + (TC)n Simple_repeat Simple_repeat 1 100 0 1613 257 64 60 chr5 147201589 147202832 -52427318 + L1ME1 LINE L1 332 1458 -4757 1219 250 58 0 chr5 147202836 147203200 -52426950 + L1ME1 LINE L1 5846 6230 -5 2177 221 153 36 chr5 147203206 147203963 -52426187 + L1ME1 LINE L1 5385 6230 -5 484 313 88 42 chr5 147203985 147204269 -52425881 + L1M4 LINE L1 4720 5016 -1130 194 366 15 38 chr5 147204531 147204662 -52425488 + MIR SINE MIR 113 240 -22 1999 196 35 18 chr5 147205740 147206193 -52423957 - MLT1C LTR MaLR -4 463 3 524 294 125 32 chr5 147206976 147207377 -52422773 - L2 LINE L2 -22 3291 2854 201 306 9 63 chr5 147207566 147207677 -52422473 - L2 LINE L2 -299 2973 2869 292 325 168 5 chr5 147208406 147208603 -52421547 + MIR SINE MIR 15 243 -19 * 850 300 21 4 chr5 147208595 147208835 -52421315 - MIR SINE MIR -10 252 9 504 271 142 55 chr5 147210053 147210271 -52419879 - MIR SINE MIR -12 250 14 1392 227 19 7 chr5 147212368 147212754 -52417396 - L1M4c LINE L1 -3890 2494 2147 1887 147 0 16 chr5 147212754 147213060 -52417090 + AluSx SINE Alu 1 301 -11 2207 88 3 3 chr5 147213062 147213370 -52416780 + AluY SINE Alu 1 308 -3 371 327 27 20 chr5 147215307 147215457 -52414693 - MIR SINE MIR -13 249 99 418 289 26 0 chr5 147217023 147217137 -52413013 + MIR SINE MIR 18 134 -128 258 298 48 48 chr5 147218248 147218456 -52411694 - L2 LINE L2 -253 3060 2853 467 290 63 81 chr5 147218587 147218922 -52411228 - L2 LINE L2 -15 3257 2929 234 0 0 0 chr5 147222934 147222960 -52407190 + (A)n Simple_repeat Simple_repeat 1 26 0 352 100 0 0 chr5 147223555 147223605 -52406545 - MADE1 DNA Mariner -30 50 1 213 191 64 0 chr5 147223662 147223709 -52406441 - MIR SINE MIR -18 244 195 546 238 57 11 chr5 147223710 147223969 -52406181 - L1MB8 LINE L1 0 6178 5886 808 219 39 6 chr5 147223974 147224152 -52405998 - MIR SINE MIR -61 201 18 2432 121 8 11 chr5 147224762 147225127 -52405023 + THE1B LTR MaLR 1 364 0 10056 85 2 121 chr5 147225127 147226920 -52403230 + THE1B-int LTR MaLR 1 1580 0 2356 118 19 45 chr5 147226920 147227294 -52402856 + THE1B LTR MaLR 1 364 0 568 262 54 18 chr5 147227454 147227622 -52402528 - MIR SINE MIR -4 258 85 4026 188 52 9 chr5 147227668 147228617 -52401533 - L1MB5 LINE L1 -9 6165 5191 688 322 24 72 chr5 147228705 147229243 -52400907 - MER34 LTR ERV1 -29 513 2 717 191 37 47 chr5 147229244 147229459 -52400691 - L1MB5 LINE L1 -1026 5120 4908 187 356 0 0 chr5 147230031 147230090 -52400060 - MIR SINE MIR -90 118 60 242 297 90 9 chr5 147230534 147230645 -52399505 - MIR SINE MIR -90 172 53 441 303 49 69 chr5 147230671 147231135 -52399015 - L2 LINE L2 -49 3264 2798 257 338 0 27 chr5 147231745 147231819 -52398331 + MIR SINE MIR 21 92 -170 1015 241 62 13 chr5 147232263 147232570 -52397580 - MLT1C LTR MaLR 0 467 146 435 314 42 7 chr5 147232783 147232942 -52397208 + MIR SINE MIR 19 185 -58 2230 141 28 0 chr5 147233217 147233544 -52396606 + MER1B DNA MER1_type 1 336 -1 2091 192 58 46 chr5 147234683 147235182 -52394968 + MLT1D LTR MaLR 1 505 0 184 289 97 35 chr5 147235187 147235301 -52394849 + MIR SINE MIR 120 240 -22 737 219 82 61 chr5 147235743 147236022 -52394128 + L2 LINE L2 3029 3313 0 267 226 129 24 chr5 147236317 147236441 -52393709 - L1ME4a LINE L1 -11 6110 5974 310 291 189 16 chr5 147236932 147237366 -52392784 - L2 LINE L2 -242 3030 2513 267 203 0 0 chr5 147238827 147238886 -52391264 + (TG)n Simple_repeat Simple_repeat 1 59 0 259 254 40 119 chr5 147239296 147239422 -52390728 + L2 LINE L2 3115 3230 -42 15519 131 17 2 chr5 147240211 147242589 -52387561 - Tigger1 DNA MER2_type 0 2418 5 646 261 46 36 chr5 147242614 147242809 -52387341 - MIR SINE MIR -3 259 63 430 252 47 0 chr5 147242850 147242957 -52387193 - MER45A DNA AcHobo -18 160 49 255 319 32 11 chr5 147243386 147243480 -52386670 + MIR3 SINE MIR 60 155 -53 199 420 0 0 chr5 147244679 147244779 -52385371 - MIR SINE MIR -24 238 139 318 215 46 0 chr5 147244796 147244861 -52385289 - L2 LINE L2 -17 3296 3229 372 294 188 0 chr5 147245727 147245887 -52384263 - MIR SINE MIR -8 254 65 2747 107 0 3 chr5 147246388 147246752 -52383398 - THE1B LTR MaLR 0 364 2 3279 163 7 66 chr5 147246757 147247482 -52382668 - LTR8A LTR ERV1 -45 682 1 841 267 72 23 chr5 147247514 147247821 -52382329 - Charlie8 DNA MER1_type -1980 437 116 254 306 160 0 chr5 147248276 147248495 -52381655 - L1ME4a LINE L1 -30 6091 5838 303 28 0 0 chr5 147248562 147248598 -52381552 + (CA)n Simple_repeat Simple_repeat 2 37 0 506 325 75 8 chr5 147248610 147248850 -52381300 + MIR SINE MIR 5 260 -2 392 264 65 69 chr5 147248859 147249090 -52381060 - L1ME4a LINE L1 -347 5774 5545 349 333 160 24 chr5 147249719 147250094 -52380056 - L2 LINE L2 -5 3267 2842 187 365 0 0 chr5 147250492 147250544 -52379606 + L2 LINE L2 3210 3261 -11 221 351 32 2 chr5 147250550 147250742 -52379408 - L2 LINE L2 -920 2394 2152 492 303 91 10 chr5 147250821 147251019 -52379131 - MIR SINE MIR -15 247 34 385 294 35 59 chr5 147252312 147252482 -52377668 - MIR SINE MIR -50 212 47 339 250 10 0 chr5 147255313 147255409 -52374741 + L1ME3 LINE L1 6066 6162 0 722 259 148 25 chr5 147255491 147255889 -52374261 + L1MC4 LINE L1 7463 7909 -133 348 24 0 0 chr5 147255917 147255958 -52374192 + (CA)n Simple_repeat Simple_repeat 2 42 0 317 195 0 68 chr5 147256329 147256447 -52373703 + L1MD3 LINE L1 7886 7995 0 235 295 39 0 chr5 147257970 147258048 -52372102 - MIR SINE MIR -10 252 172 81 21 0 0 chr5 147258120 147258215 -52371935 + AT_rich Low_complexity Low_complexity 1 95 0 264 234 0 23 chr5 147258216 147258293 -52371857 - MIR SINE MIR -129 79 5 480 18 0 0 chr5 147258310 147258367 -52371783 + (CA)n Simple_repeat Simple_repeat 2 58 0 422 272 33 138 chr5 147259200 147259476 -52370674 - MIR SINE MIR -6 256 10 288 260 125 10 chr5 147259421 147259517 -52370633 + MIR SINE MIR 23 129 -133 * 646 293 25 17 chr5 147259497 147259736 -52370414 + L2 LINE L2 2724 2964 -350 * 920 264 38 20 chr5 147259732 147260024 -52370126 - L2 LINE L2 -1391 1923 1627 252 122 0 0 chr5 147260028 147260069 -52370081 + (TCC)n Simple_repeat Simple_repeat 2 42 0 611 316 56 9 chr5 147260938 147261169 -52368981 - MIR SINE MIR 0 262 21 218 269 58 39 chr5 147261622 147261726 -52368424 - MIR SINE MIR -83 125 20 252 235 61 51 chr5 147262147 147262245 -52367905 + MIR SINE MIR 33 131 -77 475 272 105 140 chr5 147262653 147263252 -52366898 + L3 LINE CR1 689 1266 -311 342 67 0 0 chr5 147263376 147263421 -52366729 + (T)n Simple_repeat Simple_repeat 1 45 0 204 225 0 0 chr5 147263950 147263990 -52366160 + (TATG)n Simple_repeat Simple_repeat 1 40 0 618 273 158 17 chr5 147265707 147266124 -52364026 - LTR33 LTR ERVL -8 513 38 290 297 48 42 chr5 147268983 147269148 -52361002 + MIR SINE MIR 46 211 -51 404 219 70 94 chr5 147269194 147269290 -52360860 + L2 LINE L2 3147 3241 -31 2338 112 3 0 chr5 147269290 147269602 -52360548 + AluSq SINE Alu 1 313 0 404 219 70 94 chr5 147269602 147269633 -52360517 + L2 LINE L2 3241 3271 -1 308 227 15 0 chr5 147271714 147271780 -52358370 + MIR SINE MIR 115 181 -81 349 259 102 11 chr5 147272991 147273138 -52357012 - MIR SINE MIR -63 145 32 416 296 63 0 chr5 147273291 147273433 -52356717 + MIR SINE MIR 68 218 -44 191 324 14 0 chr5 147273681 147273752 -52356398 - L2 LINE L2 -60 3253 3182 226 273 30 0 chr5 147273781 147273847 -52356303 - L2 LINE L2 0 3313 3246 364 279 104 27 chr5 147275047 147275259 -52354891 - MIR SINE MIR -40 222 1 396 158 0 0 chr5 147275743 147275819 -52354331 + (CA)n Simple_repeat Simple_repeat 2 77 0 202 333 0 0 chr5 147276238 147276307 -52353843 - L2 LINE L2 -527 2787 2719 4482 181 28 33 chr5 147276337 147278165 -52351985 - L1MB3 LINE L1 -3 6180 4365 1538 277 124 31 chr5 147278171 147279001 -52351149 - L2 LINE L2 -605 2709 1803 253 240 0 0 chr5 147279245 147279295 -52350855 + L2 LINE L2 3207 3256 -16 2297 141 8 6 chr5 147280433 147280796 -52349354 - THE1B LTR MaLR 0 364 1 1733 226 114 9 chr5 147281972 147282486 -52347664 + MLT1E2 LTR MaLR 1 626 0 441 230 58 65 chr5 147283178 147283231 -52346919 - MIR SINE MIR -113 149 97 1671 198 34 8 chr5 147283231 147283585 -52346565 + MLT1A1 LTR MaLR 3 365 0 441 230 58 65 chr5 147283585 147283670 -52346480 - MIR SINE MIR -165 97 12 548 258 60 13 chr5 147283719 147283870 -52346280 - MER5B DNA MER1_type -1 177 20 244 311 44 30 chr5 147283877 147284012 -52346138 - MER5A DNA MER1_type -5 184 48 455 233 19 0 chr5 147284041 147284144 -52346006 - MER5A DNA MER1_type -80 109 4 574 218 118 24 chr5 147284180 147284350 -52345800 + MER5A DNA MER1_type 2 187 -2 322 220 0 0 chr5 147284864 147284923 -52345227 - L2 LINE L2 0 3272 3214 243 232 35 60 chr5 147285060 147285162 -52344988 - MIR SINE MIR -60 148 71 470 277 40 51 chr5 147286474 147286651 -52343499 - L2 LINE L2 -629 2685 2511 1566 108 45 14 chr5 147287145 147287368 -52342782 + MER30 DNA MER1_type 1 230 0 256 268 39 47 chr5 147287600 147287727 -52342423 - MER5B DNA MER1_type -30 148 23 292 250 121 43 chr5 147290192 147290332 -52339818 - MIR SINE MIR -14 248 98 299 250 35 52 chr5 147290458 147290574 -52339576 + L2 LINE L2 3198 3311 -2 191 265 20 0 chr5 147290620 147290669 -52339481 + MIR SINE MIR 47 96 -166 455 234 125 109 chr5 147290796 147291245 -52338905 - L1ME4a LINE L1 -104 6017 5562 318 342 147 19 chr5 147291537 147292078 -52338072 + L2 LINE L2 2695 3313 0 215 253 145 0 chr5 147292303 147292386 -52337764 - MIR SINE MIR -76 186 92 406 295 62 0 chr5 147292717 147292846 -52337304 + MER91C DNA MER1_type 1 137 -3 339 194 16 0 chr5 147293464 147293526 -52336624 + MER115 DNA AcHobo 10 72 -621 5773 210 49 52 chr5 147293829 147295181 -52334969 + L1ME1 LINE L1 3665 4997 -1169 725 206 0 0 chr5 147295181 147295307 -52334843 + FLAM_C SINE Alu 1 126 -7 5773 210 49 52 chr5 147295307 147296398 -52333752 + L1ME1 LINE L1 4997 6090 -76 310 257 0 14 chr5 147296472 147296542 -52333608 + MER115 DNA AcHobo 625 693 0 264 319 112 37 chr5 147296712 147296900 -52333250 - MIR SINE MIR -2 260 59 182 236 91 18 chr5 147298059 147298114 -52332036 - MIR SINE MIR -12 250 192 669 230 61 61 chr5 147298140 147298401 -52331749 - MIR SINE MIR 0 262 2 371 337 76 45 chr5 147298939 147299428 -52330722 - L2 LINE L2 0 3313 2810 347 223 53 11 chr5 147299733 147299827 -52330323 - MLT1K LTR MaLR -6 582 485 214 194 28 0 chr5 147300348 147300420 -52329730 + (TA)n Simple_repeat Simple_repeat 1 74 0 721 94 0 0 chr5 147300424 147300520 -52329630 - AluSg/x SINE Alu -15 295 200 360 94 0 0 chr5 147300539 147300581 -52329569 + (TG)n Simple_repeat Simple_repeat 1 95 0 360 94 0 0 chr5 147300581 147300634 -52329516 + (TG)n Simple_repeat Simple_repeat 2 54 0 2181 102 0 3 chr5 147300673 147300956 -52329194 - AluSx SINE Alu -30 282 1 21 57 0 0 chr5 147300961 147300996 -52329154 + AT_rich Low_complexity Low_complexity 1 35 0 279 54 0 0 chr5 147301049 147301086 -52329064 + (CA)n Simple_repeat Simple_repeat 2 38 0 2132 105 37 3 chr5 147301097 147301391 -52328759 - AluSx SINE Alu -8 304 1 249 139 0 0 chr5 147301485 147301528 -52328622 + (CA)n Simple_repeat Simple_repeat 2 44 0 1718 116 0 4 chr5 147301539 147301772 -52328378 - AluSg/x SINE Alu -3 309 78 513 292 68 34 chr5 147302196 147302665 -52327485 - HAL1 LINE L1 -895 1612 1128 251 272 22 66 chr5 147302914 147303050 -52327100 - HAL1b LINE L1 -858 490 361 1119 270 129 7 chr5 147303922 147304356 -52325794 + LTR16C LTR ERVL 5 491 0 682 301 42 10 chr5 147304491 147304780 -52325370 + L1MC4a LINE L1 5611 5908 -1900 233 137 0 78 chr5 147304800 147304851 -52325299 - L2 LINE L2 -9 3304 3258 312 70 0 0 chr5 147305065 147305108 -52325042 + (TG)n Simple_repeat Simple_repeat 2 44 0 1987 130 7 13 chr5 147305240 147305539 -52324611 + AluSx SINE Alu 1 297 -15 201 39 0 0 chr5 147305559 147305585 -52324565 + (CA)n Simple_repeat Simple_repeat 1 26 0 1955 100 0 19 chr5 147308390 147308651 -52321499 + AluSx SINE Alu 33 288 -24 248 162 0 81 chr5 147308695 147308769 -52321381 + L1ME LINE L1 5382 5449 -672 199 280 93 9 chr5 147308866 147308973 -52321177 + L2 LINE L2 2968 3083 -189 255 243 279 0 chr5 147309080 147309220 -52320930 - MIR SINE MIR 0 262 84 410 319 87 0 chr5 147309983 147310168 -52319982 + MIR SINE MIR 46 246 -16 364 281 23 23 chr5 147310820 147310948 -52319202 + MIR SINE MIR 18 145 -63 438 243 69 64 chr5 147310957 147311159 -52318991 - L2 LINE L2 -5 3308 3106 1727 155 7 56 chr5 147311478 147311782 -52318368 - AluJo SINE Alu -23 289 1 193 296 42 0 chr5 147312113 147312184 -52317966 - MIR SINE MIR -78 184 111 318 227 227 25 chr5 147312422 147312585 -52317565 + L2 LINE L2 3118 3313 0 265 239 94 34 chr5 147314149 147314266 -52315884 - MIR3 SINE MIR -24 184 61 355 214 0 24 chr5 147314786 147314870 -52315280 + MIR SINE MIR 70 151 -111 1848 162 10 26 chr5 147314871 147315174 -52314976 + AluJo SINE Alu 1 298 -14 197 340 64 0 chr5 147316033 147316127 -52314023 + MIR SINE MIR 38 137 -71 200 248 0 147 chr5 147316296 147316339 -52313811 + MIR SINE MIR 153 201 -61 360 0 0 0 chr5 147316339 147316379 -52313771 + (TG)n Simple_repeat Simple_repeat 2 41 0 200 248 0 147 chr5 147316379 147316464 -52313686 + MIR SINE MIR 201 262 0 616 319 26 22 chr5 147317236 147317462 -52312688 + L1MC/D LINE L1 5525 5751 -2057 1797 167 70 6 chr5 147318510 147318851 -52311299 - MLT1A1 LTR MaLR 0 365 3 302 235 31 31 chr5 147319109 147319207 -52310943 + L3 LINE CR1 1220 1317 -260 1318 167 0 9 chr5 147319231 147319441 -52310709 + AluJo SINE Alu 83 290 -22 296 249 67 55 chr5 147319461 147319626 -52310524 + L3 LINE CR1 1332 1498 -79 198 354 24 0 chr5 147319673 147319755 -52310395 + L2 LINE L2 3187 3270 -43 1719 176 0 14 chr5 147320154 147320450 -52309700 + AluJo SINE Alu 1 292 -20 244 213 50 113 chr5 147320462 147320542 -52309608 + MIR SINE MIR 84 158 -104 2500 118 30 55 chr5 147320786 147320899 -52309251 + MSTA LTR MaLR 1 115 -313 2094 151 0 6 chr5 147320899 147321211 -52308939 - AluSx SINE Alu -2 310 1 2500 118 30 55 chr5 147321211 147321536 -52308614 + MSTA LTR MaLR 115 428 0 193 315 45 11 chr5 147322115 147322204 -52307946 - L2 LINE L2 0 3272 3181 182 309 0 0 chr5 147322921 147322976 -52307174 + L2 LINE L2 3204 3258 -14 224 326 90 45 chr5 147323289 147323467 -52306683 + L2 LINE L2 1977 2162 -1152 453 297 132 60 chr5 147323524 147323790 -52306360 + MLT1H LTR MaLR 36 320 -229 609 244 16 0 chr5 147323852 147323979 -52306171 + MLT1H LTR MaLR 420 548 -1 1645 311 98 30 chr5 147323979 147324951 -52305199 + L2 LINE L2 2198 3272 0 408 284 157 86 chr5 147324980 147325534 -52304616 - L2 LINE L2 0 3272 2670 2207 128 13 0 chr5 147325534 147325838 -52304312 + AluSx SINE Alu 1 308 -4 408 284 157 86 chr5 147325838 147325974 -52304176 - L2 LINE L2 -602 2670 2545 2158 112 0 36 chr5 147326030 147326335 -52303815 + AluSx SINE Alu 1 294 -18 459 0 0 0 chr5 147326366 147326417 -52303733 + (CA)n Simple_repeat Simple_repeat 1 51 0 297 304 0 0 chr5 147328132 147328211 -52301939 + (CA)n Simple_repeat Simple_repeat 2 80 0 272 226 151 28 chr5 147328562 147328668 -52301482 - L2 LINE L2 -4 3268 3150 365 312 84 88 chr5 147329256 147329708 -52300442 + L2 LINE L2 2823 3272 0 1017 194 0 0 chr5 147330462 147330632 -52299518 + AluJb SINE Alu 137 306 -6 494 252 94 0 chr5 147331136 147331263 -52298887 + L2 LINE L2 3134 3272 0 2610 68 0 0 chr5 147331361 147331670 -52298480 - AluY SINE Alu -2 309 1 410 336 44 7 chr5 147332693 147332830 -52297320 + MIR SINE MIR 2 143 -119 286 277 54 60 chr5 147333386 147333552 -52296598 + MIR SINE MIR 95 259 -3 279 79 0 0 chr5 147333554 147333592 -52296558 + (TG)n Simple_repeat Simple_repeat 1 38 0 333 247 41 41 chr5 147333592 147333738 -52296412 + HAL1b LINE L1 1201 1346 -2 462 262 48 32 chr5 147334092 147334218 -52295932 + L2 LINE L2 3143 3270 -2 187 345 35 0 chr5 147334394 147334452 -52295698 - L2 LINE L2 -20 3293 3234 484 257 110 97 chr5 147334598 147335143 -52295007 - L2 LINE L2 -256 3057 2499 375 266 93 70 chr5 147335167 147335426 -52294724 + L2 LINE L2 3049 3313 0 265 221 100 42 chr5 147335490 147335610 -52294540 - MLT1K LTR MaLR -2 588 414 504 205 26 66 chr5 147335881 147336032 -52294118 - L2 LINE L2 -853 2461 2317 846 293 56 27 chr5 147336039 147336377 -52293773 - MLT1K LTR MaLR -26 562 215 710 294 50 18 chr5 147336372 147336651 -52293499 - MLT1K LTR MaLR -168 420 133 * 399 303 86 7 chr5 147336758 147336910 -52293240 - L2 LINE L2 -1003 2311 2148 845 257 36 5 chr5 147337013 147337235 -52292915 - MIR SINE MIR -6 256 28 549 211 0 0 chr5 147338978 147339082 -52291068 - MER20 DNA MER1_type 0 219 116 210 324 108 20 chr5 147339863 147339965 -52290185 - L3b LINE CR1 -103 1480 1370 809 280 0 5 chr5 147342231 147342424 -52287726 + MIR SINE MIR 69 260 -2 2022 115 47 0 chr5 147343476 147343788 -52286362 - AluSq SINE Alu 0 325 1 190 425 53 0 chr5 147343977 147344090 -52286060 + L2 LINE L2 3126 3244 -28 2251 116 3 0 chr5 147344594 147344895 -52285255 - AluSx SINE Alu -10 302 1 181 318 111 32 chr5 147345676 147345865 -52284285 + L2 LINE L2 2857 3060 -212 702 305 108 22 chr5 147346188 147346549 -52283601 + L2 LINE L2 2921 3312 -1 2236 101 0 7 chr5 147349370 147349685 -52280465 - AluSq SINE Alu 0 313 1 721 168 8 24 chr5 147349696 147349821 -52280329 - FLAM_C SINE Alu -10 123 1 361 227 0 0 chr5 147349857 147349923 -52280227 - MER2 DNA MER2_type 0 345 280 1122 171 5 5 chr5 147349965 147350164 -52279986 - MER2 DNA MER2_type -145 200 2 401 294 24 48 chr5 147351239 147351365 -52278785 + MIR SINE MIR 19 141 -67 23 0 0 0 chr5 147351534 147351557 -52278593 + AT_rich Low_complexity Low_complexity 1 23 0 511 260 83 18 chr5 147352486 147352665 -52277485 + MIR3 SINE MIR 14 202 -6 214 256 51 39 chr5 147353294 147353372 -52276778 - MIR SINE MIR -72 136 58 1950 144 6 13 chr5 147354324 147354637 -52275513 - MER1B DNA MER1_type 0 339 29 523 260 47 24 chr5 147355615 147355784 -52274366 + MIR SINE MIR 73 245 -17 2038 198 100 25 chr5 147355931 147356212 -52273938 - MLT1D LTR MaLR 0 505 174 2124 120 0 20 chr5 147356212 147356511 -52273639 - AluSg SINE Alu -17 293 1 2038 198 100 25 chr5 147356511 147356699 -52273451 - MLT1D LTR MaLR -331 174 1 2530 58 3 10 chr5 147359292 147359604 -52270546 - AluY SINE Alu -1 310 1 579 307 164 0 chr5 147360405 147360630 -52269520 - MIR SINE MIR 0 262 1 204 40 0 0 chr5 147360802 147360827 -52269323 + (CA)n Simple_repeat Simple_repeat 2 26 0 209 311 0 54 chr5 147361650 147361724 -52268426 + L2 LINE L2 2992 3061 -211 309 288 49 19 chr5 147363335 147363482 -52266668 + MIR3 SINE MIR 33 182 -42 184 214 143 48 chr5 147365061 147365145 -52265005 + MIR SINE MIR 51 142 -120 200 265 0 0 chr5 147365547 147365596 -52264554 + CT-rich Low_complexity Low_complexity 2 50 0 301 275 193 70 chr5 147366740 147366984 -52263166 - L2 LINE L2 -14 3258 2985 435 320 63 39 chr5 147367175 147367556 -52262594 - L2 LINE L2 -699 2615 2226 228 316 111 42 chr5 147367867 147368346 -52261804 - L2 LINE L2 -636 2678 2165 409 285 177 0 chr5 147368346 147368520 -52261630 + MIR SINE MIR 2 209 -53 258 333 71 0 chr5 147368819 147368918 -52261232 + MIR SINE MIR 36 141 -67 264 302 0 0 chr5 147369900 147369963 -52260187 + MER5A DNA MER1_type 9 71 -118 36 0 0 0 chr5 147369963 147369999 -52260151 + AT_rich Low_complexity Low_complexity 1 36 0 187 306 122 58 chr5 147370903 147371246 -52258904 + L2 LINE L2 2420 2784 -530 255 235 103 0 chr5 147371659 147371727 -52258423 + MIR SINE MIR 62 136 -72 761 304 17 25 chr5 147372975 147373212 -52256938 - MIR SINE MIR -19 243 9 2318 124 33 28 chr5 147373256 147373618 -52256532 + THE1B LTR MaLR 1 364 0 204 225 0 0 chr5 147375744 147375784 -52254366 + (TATG)n Simple_repeat Simple_repeat 1 40 0 237 132 0 0 chr5 147376581 147376619 -52253531 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 202 298 48 19 chr5 147376621 147376725 -52253425 - L2 LINE L2 0 3272 3166 490 298 90 15 chr5 147378305 147378556 -52251594 - MIR SINE MIR -1 261 6 432 0 0 0 chr5 147378637 147378651 -52251499 + (TG)n Simple_repeat Simple_repeat 1 62 0 432 0 0 0 chr5 147378651 147378699 -52251451 + (TG)n Simple_repeat Simple_repeat 2 49 0 218 298 111 49 chr5 147379759 147380145 -52250005 + L2 LINE L2 2863 3272 0 275 271 82 0 chr5 147380864 147380986 -52249164 - L1ME4a LINE L1 -179 5942 5811 581 274 18 12 chr5 147382981 147383149 -52247001 - MER117 DNA MER1_type -28 169 1 279 259 200 12 chr5 147384805 147384975 -52245175 + L1MC4 LINE L1 5704 5905 -1903 245 273 26 0 chr5 147385021 147385098 -52245052 + HAL1b LINE L1 1193 1271 -77 28 0 0 0 chr5 147385642 147385670 -52244480 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chr5 147385670 147385694 -52244456 + (TG)n Simple_repeat Simple_repeat 1 24 0 * 225 0 0 0 chr5 147385693 147385718 -52244432 + (GA)n Simple_repeat Simple_repeat 1 25 0 1282 229 82 3 chr5 147386078 147386432 -52243718 - Charlie1b DNA MER1_type -87 436 55 236 250 0 0 chr5 147386459 147386507 -52243643 + L1MC4 LINE L1 6656 6703 -1339 230 292 0 0 chr5 147386465 147386530 -52243620 - L1MC4 LINE L1 -1339 6703 6639 * 1347 238 12 19 chr5 147388427 147388750 -52241400 + L1M4 LINE L1 3902 4222 -1924 473 178 9 65 chr5 147388763 147388870 -52241280 + L1MB8 LINE L1 6071 6171 -7 252 86 0 0 chr5 147388874 147388909 -52241241 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1927 162 3 0 chr5 147388911 147389201 -52240949 - AluJb SINE Alu -21 291 1 207 179 0 0 chr5 147389391 147389430 -52240720 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 441 317 26 52 chr5 147389508 147389738 -52240412 + MIR SINE MIR 33 256 -6 663 216 87 6 chr5 147390340 147390593 -52239557 + MER46C DNA MER2_type 10 335 -3 274 364 0 32 chr5 147390690 147390844 -52239306 + MIR SINE MIR 20 168 -94 414 0 0 0 chr5 147391749 147391795 -52238355 + (CA)n Simple_repeat Simple_repeat 2 47 0 463 273 9 9 chr5 147391905 147392015 -52238135 + MIR SINE MIR 6 115 -147 2196 118 0 0 chr5 147392345 147392642 -52237508 + AluSx SINE Alu 1 297 -15 338 243 0 107 chr5 147395588 147395632 -52234518 - MIR SINE MIR -1 261 214 2369 88 3 3 chr5 147395632 147395938 -52234212 - AluSg SINE Alu -4 306 1 338 243 0 107 chr5 147395938 147396033 -52234117 - MIR SINE MIR -48 214 137 620 221 45 19 chr5 147396125 147396279 -52233871 - MIR SINE MIR -89 173 16 361 302 71 8 chr5 147396308 147396434 -52233716 + L2 LINE L2 3175 3308 -5 329 302 122 29 chr5 147396914 147397159 -52232991 + MLT1J LTR MaLR 42 309 -202 801 306 34 37 chr5 147397251 147397574 -52232576 + MER113 DNA MER1_type? 198 519 -2 523 287 20 0 chr5 147397650 147397800 -52232350 + MIR SINE MIR 1 153 -109 650 183 11 91 chr5 147398069 147398244 -52231906 + MER58C DNA MER1_type 55 215 0 273 242 70 39 chr5 147398960 147399088 -52231062 + L2 LINE L2 2926 3057 -256 187 314 113 32 chr5 147399127 147399251 -52230899 + L2 LINE L2 3180 3313 0 353 332 161 0 chr5 147400633 147400844 -52229306 - MIR SINE MIR -13 249 5 575 198 25 8 chr5 147400962 147401083 -52229067 - MLT1C LTR MaLR 0 467 345 286 343 22 0 chr5 147401165 147401302 -52228848 - MLT1L LTR MaLR 0 615 476 246 244 36 129 chr5 147401409 147401602 -52228548 - L1ME LINE L1 -472 5649 5475 1397 164 8 0 chr5 147402231 147402469 -52227681 + L1PA16 LINE L1 5909 6148 -18 454 335 40 0 chr5 147402541 147402741 -52227409 - L1ME LINE L1 -2189 3957 3750 1696 155 7 58 chr5 147403391 147403700 -52226450 - AluJo SINE Alu -19 293 1 305 338 66 24 chr5 147403896 147404109 -52226041 - L1ME LINE L1 -2871 3275 3054 480 279 50 6 chr5 147404271 147404432 -52225718 + MIR SINE MIR 65 232 -30 283 259 43 26 chr5 147404444 147404460 -52225690 - MIR SINE MIR -97 165 151 522 125 0 0 chr5 147404460 147404540 -52225610 - MADE1 DNA Mariner 0 80 1 283 259 43 26 chr5 147404540 147404639 -52225511 - MIR SINE MIR -111 151 48 245 211 53 40 chr5 147404738 147404814 -52225336 - HAL1b LINE L1 -1001 347 271 4016 130 114 130 chr5 147405456 147405790 -52224360 - L1MC3 LINE L1 -8 7777 7439 2102 114 3 3 chr5 147405790 147406080 -52224070 + AluSx SINE Alu 1 290 -22 4016 130 114 130 chr5 147406080 147406389 -52223761 - L1MC3 LINE L1 -346 7439 7126 239 246 0 29 chr5 147406389 147406458 -52223692 - MLT1F1 LTR MaLR -480 87 21 4016 130 114 130 chr5 147406458 147406849 -52223301 - L1MC3 LINE L1 -659 7126 6692 1236 227 107 71 chr5 147407071 147407606 -52222544 - MLT1E LTR MaLR 0 593 7 358 297 35 14 chr5 147407841 147407986 -52222164 - MIR SINE MIR -18 244 97 185 222 22 0 chr5 147408375 147408420 -52221730 - MIR SINE MIR -168 94 49 189 213 0 0 chr5 147409221 147409268 -52220882 + (TTAGGG)n Simple_repeat Simple_repeat 5 51 0 473 344 60 3 chr5 147409307 147409592 -52220558 + L2 LINE L2 1980 2280 -1034 268 335 186 0 chr5 147410941 147411177 -52218973 + L2 LINE L2 2376 2655 -659 450 338 19 7 chr5 147411186 147411340 -52218810 - MER91A DNA MER1_type -16 180 25 417 316 34 21 chr5 147411358 147411592 -52218558 + L2 LINE L2 2635 2871 -443 400 298 91 47 chr5 147411649 147411924 -52218226 + L2 LINE L2 2989 3275 -38 1699 162 3 25 chr5 147412407 147412691 -52217459 - AluJb SINE Alu -34 278 1 209 196 18 0 chr5 147413529 147413585 -52216565 + CT-rich Low_complexity Low_complexity 2 58 0 359 355 0 0 chr5 147413967 147414088 -52216062 + MIR SINE MIR 30 150 -58 638 328 94 37 chr5 147414093 147414529 -52215621 - MLT1K LTR MaLR -3 585 125 182 373 18 9 chr5 147414785 147414895 -52215255 - MIR3 SINE MIR -92 116 6 354 236 28 0 chr5 147415222 147415294 -52214856 + MIR3 SINE MIR 108 181 -27 305 189 11 0 chr5 147416435 147416530 -52213620 + (TCTA)n Simple_repeat Simple_repeat 3 98 0 2294 262 118 25 chr5 147416571 147417696 -52212454 - L2 LINE L2 0 3313 2045 320 121 35 0 chr5 147418361 147418419 -52211731 + (CATA)n Simple_repeat Simple_repeat 4 63 0 294 29 0 0 chr5 147418475 147418510 -52211640 + (TA)n Simple_repeat Simple_repeat 1 35 0 15325 127 27 7 chr5 147421118 147423465 -52206685 - Tigger1 DNA MER2_type 0 2418 25 2132 236 52 44 chr5 147423660 147424225 -52205925 + MER77 LTR ERV1 54 597 -8 1100 261 84 8 chr5 147424368 147424748 -52205402 + MLT1I LTR MaLR 1 409 0 228 267 204 16 chr5 147424909 147425100 -52205050 + L1ME LINE L1 5589 5815 -306 180 97 0 0 chr5 147425208 147425239 -52204911 + (CAA)n Simple_repeat Simple_repeat 2 32 0 2966 153 65 17 chr5 147425265 147425888 -52204262 - MER39 LTR ERV1 0 707 1 616 328 0 6 chr5 147425889 147426060 -52204090 + L1MEc LINE L1 131 300 -6096 3871 243 19 17 chr5 147426068 147427194 -52202956 + L1M4 LINE L1 2975 4103 -2043 338 188 0 47 chr5 147427197 147427282 -52202868 - L1M4 LINE L1 -1564 4582 4502 3861 209 32 40 chr5 147427291 147428389 -52201761 + L1M4 LINE L1 4109 5197 -949 2263 96 6 6 chr5 147428395 147428731 -52201419 + AluSx SINE Alu 1 336 0 2175 100 4 0 chr5 147428740 147429019 -52201131 + AluSp SINE Alu 1 280 -33 358 306 57 118 chr5 147429247 147429841 -52200309 - L1M2 LINE L1 -5457 1392 835 237 341 78 16 chr5 147430613 147430742 -52199408 - L3 LINE CR1 -3 1574 1438 226 320 41 27 chr5 147430932 147431079 -52199071 - L3 LINE CR1 -741 836 688 1584 111 60 114 chr5 147432649 147432992 -52197158 - AluSx SINE Alu 0 328 2 1549 80 5 0 chr5 147433014 147433215 -52196935 - AluYa5 SINE Alu -11 300 99 28 0 0 0 chr5 147433664 147433692 -52196458 + AT_rich Low_complexity Low_complexity 1 28 0 385 226 186 32 chr5 147434988 147435112 -52195038 - MIR SINE MIR -74 188 46 985 294 123 18 chr5 147436954 147437410 -52192740 - MLT1J LTR MaLR -7 504 1 704 313 53 25 chr5 147437425 147437709 -52192441 + L2 LINE L2 2999 3290 -23 226 308 16 53 chr5 147438049 147438189 -52191961 + MIR SINE MIR 21 157 -62 446 263 0 51 chr5 147438759 147438877 -52191273 - L2 LINE L2 0 3313 3202 1204 240 62 0 chr5 147438893 147439185 -52190965 - MER58B DNA MER1_type -31 310 1 35 41 0 0 chr5 147439945 147439994 -52190156 + AT_rich Low_complexity Low_complexity 1 49 0 209 169 0 68 chr5 147441045 147441104 -52189046 + T-rich Low_complexity Low_complexity 5 59 0 457 305 106 45 chr5 147441463 147441998 -52188152 + L2 LINE L2 2734 3297 -16 2132 104 4 0 chr5 147442514 147442828 -52187322 + AluSg SINE Alu 1 315 0 317 246 72 58 chr5 147444412 147444550 -52185600 - MARNA DNA Mariner -150 436 297 413 58 0 0 chr5 147444586 147444638 -52185512 - MADE1 DNA Mariner -28 52 1 622 288 49 14 chr5 147444924 147445209 -52184941 - L1ME3A LINE L1 -223 5947 5653 915 70 23 0 chr5 147446133 147446261 -52183889 - L1MA2 LINE L1 -4 6300 6170 243 296 51 75 chr5 147447078 147447372 -52182778 + L1ME3A LINE L1 2266 2552 -3594 1208 117 129 4 chr5 147447427 147447675 -52182475 + MER33 DNA MER1_type 5 283 -41 26 0 0 0 chr5 147447675 147447701 -52182449 + AT_rich Low_complexity Low_complexity 1 26 0 2417 55 0 3 chr5 147447701 147447990 -52182160 - AluY SINE Alu -23 288 1 280 185 0 0 chr5 147447990 147448044 -52182106 + MER33 DNA MER1_type 271 324 0 977 233 27 14 chr5 147448077 147448369 -52181781 + L1ME3A LINE L1 4414 4709 -1437 2338 269 15 3 chr5 147448371 147448966 -52181184 - ERVL LTR ERVL -3585 2179 1578 295 328 38 0 chr5 147449001 147449132 -52181018 - ERVL LTR ERVL -4286 1478 1343 1747 238 76 4 chr5 147449135 147449610 -52180540 + L1ME3A LINE L1 5649 6157 -13 985 105 0 14 chr5 147449930 147450073 -52180077 + L1PA15 LINE L1 6012 6152 -13 259 305 0 0 chr5 147450592 147450651 -52179499 + MIR SINE MIR 204 262 0 342 251 66 48 chr5 147451463 147451584 -52178566 + MIR SINE MIR 30 152 -56 2195 116 0 0 chr5 147452222 147452515 -52177635 - AluSc SINE Alu -16 293 1 376 314 51 47 chr5 147454442 147454521 -52175629 + L1MC4a LINE L1 5708 5785 -2023 2343 108 116 15 chr5 147454521 147454910 -52175240 + MSTA LTR MaLR 1 428 0 376 314 51 47 chr5 147454910 147455066 -52175084 + L1MC4a LINE L1 5785 5944 -1864 321 235 0 0 chr5 147455747 147455815 -52174335 + MLT1H LTR MaLR 481 548 -1 1647 194 3 7 chr5 147456099 147456398 -52173752 + AluJo SINE Alu 6 303 -9 448 249 98 77 chr5 147456620 147456791 -52173359 + L1ME3A LINE L1 5157 5323 -1053 2390 86 7 0 chr5 147456791 147457093 -52173057 + AluSq SINE Alu 1 304 -9 448 249 98 77 chr5 147457093 147457349 -52172801 + L1ME3A LINE L1 5323 5633 -743 2457 199 45 33 chr5 147457625 147458329 -52171821 + L1MC5 LINE L1 7249 7961 0 833 279 99 0 chr5 147458794 147459056 -52171094 + L1ME3A LINE L1 5597 5884 -286 2274 75 0 4 chr5 147459064 147459343 -52170807 + AluSc SINE Alu 1 278 -31 180 0 0 0 chr5 147459343 147459363 -52170787 + (CA)n Simple_repeat Simple_repeat 1 20 0 244 289 79 46 chr5 147459581 147459733 -52170417 + L1ME3A LINE L1 5977 6133 -37 3984 142 20 42 chr5 147459801 147460543 -52169607 + L1P LINE L1 3121 3846 -2300 25 0 0 0 chr5 147460543 147460568 -52169582 + AT_rich Low_complexity Low_complexity 1 25 0 384 331 38 8 chr5 147460686 147460819 -52169331 - MIR SINE MIR -125 137 1 339 314 33 0 chr5 147460893 147461014 -52169136 + MIR SINE MIR 117 241 -21 2195 125 0 0 chr5 147461016 147461313 -52168837 + AluSc SINE Alu 1 297 -12 28 0 0 0 chr5 147461313 147461341 -52168809 + AT_rich Low_complexity Low_complexity 1 28 0 6392 146 34 7 chr5 147461431 147462772 -52167378 - Ricksha DNA DNA -11 3235 1826 767 137 9 13 chr5 147462777 147462996 -52167154 - Ricksha DNA DNA -2933 313 3 225 94 0 0 chr5 147464140 147464172 -52165978 + (CA)n Simple_repeat Simple_repeat 1 32 0 367 316 43 22 chr5 147464714 147464853 -52165297 - MER117 DNA MER1_type -55 142 1 500 58 35 12 chr5 147464977 147465063 -52165087 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 4838 151 41 9 chr5 147465504 147466594 -52163556 - L1MB7 LINE L1 -14 6668 5544 * 5705 133 16 43 chr5 147466581 147467448 -52162702 - L1MA10 LINE L1 0 6334 5498 2336 111 42 28 chr5 147467448 147467807 -52162343 + THE1B LTR MaLR 1 364 0 5705 133 16 43 chr5 147467807 147467964 -52162186 - L1MA10 LINE L1 -836 5498 5338 23 54 0 0 chr5 147468011 147468048 -52162102 + AT_rich Low_complexity Low_complexity 1 37 0 813 194 38 0 chr5 147468048 147468208 -52161942 - L1MA9 LINE L1 -35 6277 6112 3043 185 33 63 chr5 147468209 147468997 -52161153 - L1MB7 LINE L1 -1073 5571 4808 763 274 11 0 chr5 147468998 147469173 -52160977 + MER8 DNA MER2_type 1 177 -62 436 192 0 0 chr5 147469206 147469279 -52160871 - Tigger2 DNA MER2_type -2645 73 1 542 256 64 27 chr5 147469383 147469680 -52160470 - L1MB7 LINE L1 -4071 2575 2268 6660 216 48 28 chr5 147469685 147471699 -52158451 - L1MB7 LINE L1 -4552 2094 5 2166 151 12 58 chr5 147473590 147474022 -52156128 - MLT2D LTR ERVL 0 414 3 327 329 43 14 chr5 147477011 147477151 -52152999 - MIR3 SINE MIR -14 194 51 420 335 95 0 chr5 147477395 147477616 -52152534 + MIR SINE MIR 21 262 0 2177 120 0 0 chr5 147477904 147478227 -52151923 + AluSx SINE Alu 1 323 0 895 261 65 51 chr5 147479204 147479560 -52150590 + MLT1J LTR MaLR 69 429 -82 547 271 126 38 chr5 147479644 147480120 -52150030 - L1M4 LINE L1 -3420 2726 2209 1681 159 48 0 chr5 147480122 147480415 -52149735 - AluJo SINE Alu 0 306 1 1285 219 71 31 chr5 147480471 147480822 -52149328 + MLT1A1 LTR MaLR 1 365 0 684 196 42 14 chr5 147480831 147480974 -52149176 - LTR52 LTR ERVL -3 418 272 482 115 0 34 chr5 147481056 147481201 -52148949 - L1MC3 LINE L1 0 7785 7555 340 248 229 0 chr5 147481203 147481312 -52148838 + MER5A DNA MER1_type 50 183 -6 470 306 101 66 chr5 147481320 147481489 -52148661 + L1MEc LINE L1 1175 1337 -5226 15925 28 2 0 chr5 147481489 147484150 -52146000 - L1PA2 LINE L1 0 6155 3533 470 306 101 66 chr5 147484150 147485073 -52145077 + L1MEc LINE L1 1337 2428 -4135 1170 176 107 15 chr5 147485083 147485344 -52144806 + LTR52 LTR ERVL 1 285 -136 324 152 0 0 chr5 147485344 147485410 -52144740 - L1MDa LINE L1 -5179 1361 1296 1754 170 0 0 chr5 147485421 147485692 -52144458 - AluJo SINE Alu -30 282 12 725 150 0 33 chr5 147485724 147485844 -52144306 - FLAM_C SINE Alu -22 121 6 245 282 35 24 chr5 147486588 147486673 -52143477 - MER5B DNA MER1_type -2 176 91 6728 140 10 4 chr5 147487095 147488676 -52141474 - L1MA2 LINE L1 0 6304 4716 425 308 55 45 chr5 147489234 147489526 -52140624 - L2 LINE L2 -14 3299 3005 1808 143 49 29 chr5 147491295 147491602 -52138548 - MLT1A1 LTR MaLR 0 365 53 180 0 0 0 chr5 147493011 147493031 -52137119 + (CAGA)n Simple_repeat Simple_repeat 3 22 0 217 331 160 23 chr5 147493869 147494219 -52135931 - L2 LINE L2 -621 2693 2296 1587 157 12 102 chr5 147494314 147494715 -52135435 + MLT1A1 LTR MaLR 1 365 0 184 298 0 0 chr5 147494782 147494839 -52135311 - L2 LINE L2 -555 2759 2703 381 266 123 26 chr5 147494871 147495025 -52135125 + MIR SINE MIR 52 220 -42 542 255 7 13 chr5 147496397 147496413 -52133737 - L1MA10 LINE L1 0 6334 6319 1636 232 66 18 chr5 147496413 147496853 -52133297 - L1ME1 LINE L1 -5 6161 5701 1386 235 181 38 chr5 147497749 147498256 -52131894 - MLT1E LTR MaLR -9 584 5 1454 210 64 23 chr5 147498552 147498725 -52131425 + MLT1I LTR MaLR 3 167 -242 399 21 0 0 chr5 147498725 147498773 -52131377 + (TG)n Simple_repeat Simple_repeat 2 49 0 1454 210 64 23 chr5 147498773 147498990 -52131160 + MLT1I LTR MaLR 167 409 0 677 299 29 0 chr5 147500029 147500270 -52129880 - MIR SINE MIR 0 262 15 213 108 0 0 chr5 147501059 147501096 -52129054 + (TG)n Simple_repeat Simple_repeat 2 38 0 379 295 31 62 chr5 147501274 147501498 -52128652 - MIR SINE MIR -32 230 14 227 306 60 30 chr5 147502020 147502219 -52127931 - L1ME1 LINE L1 -828 5318 5114 242 320 20 0 chr5 147502467 147502567 -52127583 - MER117 DNA MER1_type -34 163 62 2420 77 0 10 chr5 147502923 147503233 -52126917 - AluY SINE Alu -4 307 1 328 236 236 7 chr5 147503274 147503422 -52126728 - HAL1b LINE L1 -767 581 400 835 208 70 119 chr5 147503543 147503946 -52126204 - MER68 LTR ERV1 -2 560 178 349 119 0 17 chr5 147503945 147504004 -52126146 - MER68 LTR ERV1 -504 58 1 * 322 348 38 6 chr5 147505246 147505404 -52124746 + MIR3 SINE MIR 30 192 -16 558 279 173 45 chr5 147506912 147507427 -52122723 - L2 LINE L2 -13 3300 2686 397 258 0 0 chr5 147507645 147507734 -52122416 - MLT1K LTR MaLR -3 585 497 2383 101 0 0 chr5 147508917 147509215 -52120935 + AluSx SINE Alu 1 298 -14 1185 141 11 0 chr5 147509215 147509392 -52120758 + AluSg/x SINE Alu 134 312 0 1596 134 9 79 chr5 147509596 147509939 -52120211 + MER33 DNA MER1_type 2 320 -4 3863 139 17 7 chr5 147511695 147512551 -52117599 - L1MA3 LINE L1 -436 5869 5003 2146 176 23 19 chr5 147512570 147513003 -52117147 + L1MA3 LINE L1 5871 6305 0 958 153 6 38 chr5 147514832 147515015 -52115135 - MER5B DNA MER1_type -1 177 1 221 228 158 0 chr5 147515023 147515113 -52115037 - MER5A DNA MER1_type -80 109 2 574 269 182 23 chr5 147515285 147515549 -52114601 + Charlie2 DNA MER1_type 8 313 -2549 450 265 95 21 chr5 147515581 147515770 -52114380 - MIR SINE MIR 0 262 60 305 234 0 21 chr5 147515770 147515864 -52114286 + Charlie2a DNA MER1_type 1583 1674 -1188 385 197 120 17 chr5 147515871 147515988 -52114162 + Charlie2a DNA MER1_type 2734 2862 0 372 250 139 21 chr5 147515989 147516133 -52114017 + MIR SINE MIR 32 192 -70 422 370 22 26 chr5 147516512 147516739 -52113411 - L2 LINE L2 -61 3211 2986 233 179 0 0 chr5 147518030 147518069 -52112081 - L1M3e LINE L1 -6200 830 792 265 240 90 30 chr5 147518923 147519023 -52111127 + MLT1H LTR MaLR 106 211 -338 331 235 0 0 chr5 147519163 147519231 -52110919 + MLT1H LTR MaLR 481 548 -1 1640 194 3 7 chr5 147519515 147519814 -52110336 + AluJo SINE Alu 6 303 -9 441 265 102 60 chr5 147519892 147520207 -52109943 + L1MC/D LINE L1 5010 5310 -1066 2405 93 7 0 chr5 147520207 147520509 -52109641 + AluSq SINE Alu 1 304 -9 441 265 102 60 chr5 147520509 147520765 -52109385 + L1MC/D LINE L1 5310 5633 -743 2545 198 47 33 chr5 147521041 147521744 -52108406 + L1MC5 LINE L1 7249 7961 0 590 229 133 45 chr5 147522379 147522732 -52107418 - L1ME4a LINE L1 -11 6110 5727 2046 152 0 3 chr5 147523259 147523569 -52106581 - AluSx SINE Alu -3 309 1 2403 84 0 3 chr5 147524150 147524449 -52105701 - AluSg SINE Alu -5 305 8 2212 168 34 7 chr5 147524971 147525387 -52104763 + L1MC/D LINE L1 5385 5811 -533 2041 172 34 40 chr5 147525388 147525942 -52104208 + MLT2A2 LTR ERVL 1 546 -8 282 154 15 0 chr5 147525953 147526018 -52104132 + L1MC/D LINE L1 5816 5881 -452 23 0 0 0 chr5 147528100 147528123 -52102027 + AT_rich Low_complexity Low_complexity 1 23 0 * 385 245 100 54 chr5 147528112 147528353 -52101797 - HAL1 LINE L1 -2 2505 2254 443 228 129 10 chr5 147528374 147528567 -52101583 - HAL1 LINE L1 -297 2210 1995 326 293 107 87 chr5 147529289 147529692 -52100458 - L2 LINE L2 -14 3258 2848 2481 51 0 0 chr5 147530059 147530351 -52099799 - AluY SINE Alu -19 292 1 654 248 196 24 chr5 147530455 147530879 -52099271 - HAL1 LINE L1 -794 1713 1217 493 216 209 0 chr5 147530926 147531079 -52099071 - MIR SINE MIR -37 225 41 27 0 0 0 chr5 147531416 147531443 -52098707 + AT_rich Low_complexity Low_complexity 1 27 0 2153 132 13 0 chr5 147532788 147533092 -52097058 - AluSx SINE Alu -4 308 1 365 305 133 95 chr5 147533203 147533646 -52096504 + L2 LINE L2 2813 3272 0 451 204 0 11 chr5 147533675 147533768 -52096382 - L2 LINE L2 0 3313 3222 1443 230 83 2 chr5 147533895 147534338 -52095812 - L1M4 LINE L1 -1710 4436 3958 226 163 0 0 chr5 147534494 147534537 -52095613 + MLT1B LTR MaLR 1 43 -347 1512 224 89 10 chr5 147534559 147534952 -52095198 + MLT1A2-int LTR MaLR 1312 1735 0 1273 191 97 66 chr5 147534952 147535314 -52094836 + MLT1A2 LTR MaLR 1 373 -1 1577 89 0 49 chr5 147535790 147536014 -52094136 + AluSg/x SINE Alu 82 294 -18 351 0 0 0 chr5 147536045 147536084 -52094066 + (CA)n Simple_repeat Simple_repeat 1 39 0 204 67 0 0 chr5 147537618 147537648 -52092502 + (TAGG)n Simple_repeat Simple_repeat 2 31 0 2296 107 0 25 chr5 147537729 147538047 -52092103 + AluSq SINE Alu 1 310 -3 2048 295 127 35 chr5 147538951 147539957 -52090193 + L2 LINE L2 1671 2769 -545 390 212 124 102 chr5 147540057 147540283 -52089867 + L2 LINE L2 3080 3310 -3 1126 239 67 6 chr5 147540307 147540789 -52089361 - MLT1E LTR MaLR 0 593 6 204 246 18 18 chr5 147541387 147541444 -52088706 + (TAG)n Simple_repeat Simple_repeat 2 58 0 236 301 27 0 chr5 147541536 147541609 -52088541 - MIR SINE MIR -123 139 65 2972 165 39 2 chr5 147541714 147542222 -52087928 - MER1A DNA MER1_type 0 527 1 1692 208 69 29 chr5 147542350 147542365 -52087785 + L1MB7 LINE L1 5691 5704 -480 1577 173 23 3 chr5 147542365 147542671 -52087479 - L1MB1 LINE L1 -9 6159 5848 1692 208 69 29 chr5 147542671 147543131 -52087019 + L1MB7 LINE L1 5704 6184 0 1031 205 19 5 chr5 147545675 147545885 -52084265 - MER20 DNA MER1_type 0 219 7 279 281 0 0 chr5 147546814 147546878 -52083272 + MER102a DNA MER1_type 3 66 -264 638 186 80 80 chr5 147546994 147547220 -52082930 + MER102a DNA MER1_type 104 329 -1 609 219 80 0 chr5 147547319 147547470 -52082680 - L2 LINE L2 -712 2602 2440 195 69 0 0 chr5 147551418 147551447 -52078703 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 1591 93 0 0 chr5 147551774 147551978 -52078172 - AluSg/x SINE Alu -39 273 70 1985 115 11 3 chr5 147552279 147552566 -52077584 - AluSx SINE Alu -23 289 1 180 0 0 0 chr5 147552587 147552607 -52077543 + (T)n Simple_repeat Simple_repeat 1 20 0 271 338 14 40 chr5 147554347 147554495 -52075655 + MER5A DNA MER1_type 41 184 -5 306 143 0 0 chr5 147554698 147554761 -52075389 + (TG)n Simple_repeat Simple_repeat 2 64 0 1573 245 70 78 chr5 147554930 147555267 -52074883 + L2 LINE L2 2338 2676 -637 1758 162 3 57 chr5 147555267 147555582 -52074568 - AluJb SINE Alu -14 298 1 1573 245 70 78 chr5 147555582 147555593 -52074557 + L2 LINE L2 2676 2686 -627 1956 114 0 0 chr5 147555593 147555848 -52074302 - AluSx SINE Alu -13 299 45 1573 245 70 78 chr5 147555848 147556464 -52073686 + L2 LINE L2 2686 3311 -2 184 323 135 41 chr5 147556503 147556769 -52073381 - L2 LINE L2 -97 3216 2926 184 100 100 0 chr5 147556878 147556908 -52073242 - L2 LINE L2 -1783 1531 1499 204 234 0 43 chr5 147557083 147557130 -52073020 - MER91 DNA MER1_type -5 185 141 204 333 0 0 chr5 147557170 147557227 -52072923 + L2 LINE L2 3206 3262 -10 479 254 223 11 chr5 147557639 147557899 -52072251 - L2 LINE L2 -1 3312 2998 21 0 0 0 chr5 147558836 147558857 -52071293 + AT_rich Low_complexity Low_complexity 1 21 0 202 179 36 0 chr5 147560154 147560210 -52069940 + (TA)n Simple_repeat Simple_repeat 2 59 0 565 248 133 60 chr5 147560664 147561063 -52069087 + HsTC2b DNA Tc2 1 604 -316 295 138 75 12 chr5 147561055 147561135 -52069015 + HsTC2b DNA Tc2 790 874 -44 * 213 304 0 18 chr5 147561365 147561421 -52068729 - MIR SINE MIR -185 77 23 233 333 0 0 chr5 147561669 147561735 -52068415 + L2 LINE L2 3205 3270 -2 21 57 0 0 chr5 147562637 147562672 -52067478 + AT_rich Low_complexity Low_complexity 1 35 0 959 211 50 46 chr5 147563081 147563341 -52066809 + MIR SINE MIR 2 262 0 339 253 13 0 chr5 147563916 147563995 -52066155 + LTR40c LTR ERVL 151 230 -235 549 227 122 23 chr5 147564121 147564293 -52065857 + LTR40a LTR ERVL 316 504 -15 1971 253 110 18 chr5 147564457 147565237 -52064913 - L1ME2 LINE L1 0 6164 5313 21 36 0 0 chr5 147566088 147566116 -52064034 + AT_rich Low_complexity Low_complexity 1 28 0 257 222 0 0 chr5 147566516 147566570 -52063580 + AluS SINE Alu 5 58 -245 856 327 65 18 chr5 147566717 147567160 -52062990 - L2 LINE L2 -45 3268 2805 260 246 0 16 chr5 147567759 147567820 -52062330 + L2 LINE L2 3209 3268 -4 605 180 107 33 chr5 147568227 147568349 -52061801 - FLAM_A SINE Alu -1 132 2 21 36 0 0 chr5 147569092 147569120 -52061030 + AT_rich Low_complexity Low_complexity 1 28 0 388 271 164 53 chr5 147570742 147570967 -52059183 - MIR SINE MIR -12 250 1 3250 169 20 28 chr5 147571182 147571790 -52058360 - MER6A DNA MER2_type 0 605 3 21 0 0 0 chr5 147572628 147572649 -52057501 + AT_rich Low_complexity Low_complexity 1 21 0 2658 215 87 8 chr5 147572839 147573284 -52056866 - L1MB7 LINE L1 0 6184 5776 1965 127 0 48 chr5 147573284 147573598 -52056552 + AluSx SINE Alu 1 299 -13 2658 215 87 8 chr5 147573598 147573911 -52056239 - L1MB7 LINE L1 -408 5776 5366 3354 163 30 39 chr5 147574044 147574756 -52055394 - L1MB3 LINE L1 -62 6121 5417 368 302 93 17 chr5 147575114 147575286 -52054864 + MIR SINE MIR 34 218 -44 1255 162 9 14 chr5 147575748 147575958 -52054192 - THE1C LTR MaLR -166 209 1 309 125 0 0 chr5 147576088 147576136 -52054014 - MADE1 DNA Mariner -30 50 3 2523 80 0 3 chr5 147576837 147577149 -52053001 + AluSq SINE Alu 1 311 -2 322 299 60 30 chr5 147577220 147577488 -52052662 - L1MEc LINE L1 -4280 2116 1841 589 228 7 0 chr5 147577501 147577646 -52052504 - L1MD3 LINE L1 -720 7275 7130 260 233 82 0 chr5 147577711 147577784 -52052366 + MER46C DNA MER2_type 249 327 -11 21 0 0 0 chr5 147578439 147578460 -52051690 + AT_rich Low_complexity Low_complexity 1 21 0 2351 106 0 0 chr5 147579438 147579739 -52050411 + AluSg SINE Alu 1 301 -9 603 204 152 47 chr5 147582850 147583061 -52047089 + MIR SINE MIR 29 261 -1 2268 103 3 3 chr5 147583313 147583614 -52046536 + AluSx SINE Alu 6 306 -6 213 39 0 0 chr5 147583703 147583729 -52046421 + (T)n Simple_repeat Simple_repeat 1 26 0 1546 111 22 9 chr5 147583751 147583977 -52046173 - MER30 DNA MER1_type 0 230 2 501 238 161 18 chr5 147585030 147585198 -52044952 + L2 LINE L2 3120 3311 -2 665 277 29 36 chr5 147586169 147586445 -52043705 + MLT1J LTR MaLR 22 335 -176 685 288 108 26 chr5 147586803 147587109 -52043041 - L2 LINE L2 -1 3312 2982 642 338 44 53 chr5 147587497 147587817 -52042333 - L2 LINE L2 -5 3267 2951 310 308 227 21 chr5 147587988 147588362 -52041788 - L2 LINE L2 -711 2603 2153 421 312 130 22 chr5 147588517 147588748 -52041402 - MIR SINE MIR 0 262 7 1167 191 86 57 chr5 147589047 147589383 -52040767 - MLT1B LTR MaLR -34 356 11 654 263 50 42 chr5 147589979 147590219 -52039931 - MIR SINE MIR -18 244 3 225 0 0 0 chr5 147590688 147590713 -52039437 + (GGCTG)n Simple_repeat Simple_repeat 3 27 0 225 139 0 0 chr5 147593404 147593447 -52036703 + (GA)n Simple_repeat Simple_repeat 2 44 0 744 195 136 0 chr5 147594104 147594258 -52035892 + MER96 DNA MER1_type 1 175 0 309 293 12 0 chr5 147595622 147595704 -52034446 - MIR SINE MIR -169 93 11 329 306 130 11 chr5 147595734 147595955 -52034195 - MIR3 SINE MIR -2 260 11 2222 107 0 10 chr5 147596880 147597179 -52032971 - AluSx SINE Alu -16 296 1 465 298 19 0 chr5 147598248 147598409 -52031741 - MER113 DNA MER1_type? -5 516 353 498 259 172 17 chr5 147598413 147598645 -52031505 - LTR16B LTR ERVL -1 463 196 485 229 106 11 chr5 147599243 147599422 -52030728 - MER69 DNA AcHobo -1 2525 2330 201 378 31 0 chr5 147601259 147601357 -52028793 - MER5A DNA MER1_type -26 163 63 250 245 0 0 chr5 147601589 147601638 -52028512 - MER91 DNA MER1_type -10 180 132 264 163 0 0 chr5 147601659 147601702 -52028448 + MER91 DNA MER1_type 98 140 0 48 53 0 0 chr5 147603536 147603612 -52026538 + AT_rich Low_complexity Low_complexity 1 76 0 270 0 0 0 chr5 147603630 147603660 -52026490 + (CA)n Simple_repeat Simple_repeat 2 31 0 874 156 6 72 chr5 147604152 147604319 -52025831 - FRAM SINE Alu -10 156 1 220 345 24 0 chr5 147604484 147604568 -52025582 + MER5B DNA MER1_type 6 91 -87 617 215 108 21 chr5 147605487 147605673 -52024477 - MLT1H1 LTR MaLR -8 547 346 269 213 17 20 chr5 147605806 147605916 -52024234 - MLT1F LTR MaLR -459 83 21 284 214 14 0 chr5 147608087 147608157 -52021993 - MLT1K LTR MaLR 0 588 518 237 349 12 0 chr5 147608257 147608343 -52021807 + CT-rich Low_complexity Low_complexity 3 89 0 203 280 60 0 chr5 147611426 147611476 -52018674 + L2 LINE L2 3200 3252 -20 394 241 28 0 chr5 147611861 147611969 -52018181 + Charlie8 DNA MER1_type 162 272 -2145 349 189 0 68 chr5 147612117 147612191 -52017959 - L1MC4 LINE L1 -1339 6703 6635 381 278 0 0 chr5 147612237 147612327 -52017823 + MIR SINE MIR 157 246 -16 366 205 13 0 chr5 147614505 147614583 -52015567 - L1ME2 LINE L1 -10 6154 6076 514 253 136 0 chr5 147615061 147615223 -52014927 - MER5A DNA MER1_type -3 186 3 696 233 61 109 chr5 147615411 147615627 -52014523 + MLT1E2 LTR MaLR 1 226 -400 2423 90 0 7 chr5 147615627 147615926 -52014224 + AluSg SINE Alu 1 297 -13 696 233 61 109 chr5 147615926 147616233 -52013917 + MLT1E2 LTR MaLR 226 499 -127 2239 130 0 3 chr5 147617821 147618128 -52012022 + AluSx SINE Alu 1 306 -6 313 68 83 23 chr5 147618128 147618261 -52011889 + (TA)n Simple_repeat Simple_repeat 2 142 0 26 64 0 0 chr5 147618264 147618311 -52011839 + AT_rich Low_complexity Low_complexity 1 47 0 613 254 51 23 chr5 147618863 147619080 -52011070 - MIR SINE MIR -3 259 37 2046 156 0 0 chr5 147619571 147619866 -52010284 + AluSx SINE Alu 2 296 -16 4429 77 18 37 chr5 147620017 147621066 -52009084 + MER11A LTR ERVK 1 1266 0 366 61 0 0 chr5 147621178 147621227 -52008923 + (TG)n Simple_repeat Simple_repeat 2 50 0 289 248 255 36 chr5 147622847 147623011 -52007139 + MIR SINE MIR 3 197 -37 2339 96 6 6 chr5 147623419 147623731 -52006419 + AluSp SINE Alu 2 313 0 725 286 143 34 chr5 147624517 147625253 -52004897 + L2 LINE L2 2415 3312 -1 182 254 0 60 chr5 147626237 147626304 -52003846 - L2 LINE L2 -1766 1548 1486 1433 164 40 43 chr5 147626750 147627074 -52003076 - MER33 DNA MER1_type -1 323 1 261 253 121 24 chr5 147627353 147627436 -52002714 + MIR SINE MIR 20 110 -152 993 232 69 0 chr5 147627773 147628006 -52002144 + MIR SINE MIR 3 251 -11 216 209 75 60 chr5 147628048 147628115 -52002035 - L2 LINE L2 -1 3312 3245 191 255 101 101 chr5 147628418 147628606 -52001544 - L2 LINE L2 -1506 1808 1621 206 136 23 45 chr5 147629174 147629218 -52000932 - MIR SINE MIR -67 141 99 1484 183 138 20 chr5 147629489 147629838 -52000312 + MLT1B LTR MaLR 1 390 0 456 241 221 55 chr5 147630011 147630301 -51999849 - L1MC4a LINE L1 -171 5950 5613 743 288 20 20 chr5 147630522 147630772 -51999378 - L1MC4a LINE L1 -1869 5939 5690 403 272 58 0 chr5 147630992 147631095 -51999055 + L2 LINE L2 3145 3253 -19 1794 183 0 0 chr5 147631701 147631991 -51998159 - AluJo SINE Alu -22 290 1 237 163 0 0 chr5 147633149 147633198 -51996952 + (TG)n Simple_repeat Simple_repeat 2 50 0 2374 88 0 7 chr5 147634388 147634694 -51995456 - AluSg SINE Alu -6 304 1 358 323 38 13 chr5 147635992 147636150 -51994000 + MIR SINE MIR 45 206 -56 320 297 69 0 chr5 147636187 147636288 -51993862 - L2 LINE L2 -14 3258 3151 219 297 55 55 chr5 147637434 147637562 -51992588 + L2 LINE L2 3145 3272 0 600 231 17 40 chr5 147637688 147637861 -51992289 + MIR SINE MIR 91 259 -3 183 257 214 36 chr5 147637938 147638078 -51992072 + L2 LINE L2 2659 2823 -491 417 271 87 63 chr5 147638124 147638504 -51991646 + L2 LINE L2 2923 3311 -2 832 149 0 0 chr5 147639252 147639373 -51990777 - FLAM_C SINE Alu -22 121 1 251 337 31 20 chr5 147639927 147640025 -51990125 + L2 LINE L2 3121 3219 -53 6647 136 65 12 chr5 147640283 147641368 -51988782 - Tigger1 DNA MER2_type -1273 1145 3 25 31 0 0 chr5 147641370 147641402 -51988748 + AT_rich Low_complexity Low_complexity 1 32 0 1417 158 77 35 chr5 147641430 147641740 -51988410 - MER33 DNA MER1_type -1 323 1 2049 142 9 38 chr5 147641798 147642137 -51988013 + MER1B DNA MER1_type 1 329 -10 2504 173 46 6 chr5 147642586 147643061 -51987089 + Tigger1 DNA MER2_type 1925 2418 0 795 244 84 0 chr5 147643089 147643314 -51986836 - MIR SINE MIR -18 244 1 1485 129 26 0 chr5 147644577 147644810 -51985340 - AluSg/x SINE Alu -6 304 66 2084 131 3 0 chr5 147645080 147645370 -51984780 + AluSx SINE Alu 1 291 -21 228 318 47 68 chr5 147646184 147646332 -51983818 - MER5A DNA MER1_type -19 170 26 25 0 0 0 chr5 147646630 147646655 -51983495 + AT_rich Low_complexity Low_complexity 1 25 0 1660 164 55 118 chr5 147646936 147647376 -51982774 + L1MB3 LINE L1 5715 6126 -57 214 321 47 19 chr5 147647519 147647625 -51982525 - MIR SINE MIR -29 233 125 656 274 52 20 chr5 147647724 147647972 -51982178 + MIR SINE MIR 6 261 -1 219 263 79 13 chr5 147649463 147649539 -51980611 + MIR SINE MIR 131 211 -51 356 269 236 19 chr5 147649578 147649761 -51980389 - MER20B DNA MER1_type 0 219 1 712 274 42 17 chr5 147650160 147650397 -51979753 - MIR SINE MIR -5 257 15 363 278 24 24 chr5 147650575 147650701 -51979449 - L2 LINE L2 -213 3059 2934 217 289 22 44 chr5 147651257 147651347 -51978803 + MIR SINE MIR 14 101 -161 1212 157 39 51 chr5 147651363 147651618 -51978532 - MER75 DNA T2_type -252 262 11 405 157 14 0 chr5 147651600 147651670 -51978480 - MER75 DNA T2_type -443 71 1 * 351 191 21 21 chr5 147651670 147651764 -51978386 + MIR SINE MIR 104 197 -65 275 279 58 0 chr5 147652663 147652749 -51977401 + MIR SINE MIR 59 149 -113 5763 89 0 9 chr5 147653323 147654131 -51976019 + HERVH LTR ERV1 2187 2987 -4726 845 162 20 0 chr5 147654125 147654273 -51975877 + HERVH LTR ERV1 3140 3290 -4423 * 3465 111 4 6 chr5 147654263 147654766 -51975384 + HERVH LTR ERV1 3492 3993 -3720 4218 143 22 1 chr5 147654768 147655417 -51974733 + HERVH LTR ERV1 4488 5149 -2564 1494 106 18 5 chr5 147655418 147655635 -51974515 + HERVH LTR ERV1 5600 5819 -1894 * 1918 102 36 1 chr5 147655633 147655980 -51974170 + HERVH LTR ERV1 7322 7713 0 1353 148 96 122 chr5 147655980 147656440 -51973710 + LTR7 LTR ERV1 1 448 -2 2171 146 16 18 chr5 147656441 147656826 -51973324 - L1MA7 LINE L1 -21 6270 5887 779 193 66 66 chr5 147657001 147657214 -51972936 + MER20 DNA MER1_type 2 214 -5 367 319 90 16 chr5 147657281 147657469 -51972681 - MIR SINE MIR -26 236 35 349 289 164 6 chr5 147659109 147659268 -51970882 + MLT1I LTR MaLR 224 407 -2 245 319 42 80 chr5 147659375 147659638 -51970512 + L2 LINE L2 2723 2975 -339 408 228 47 16 chr5 147661374 147661501 -51968649 - MIR SINE MIR -61 201 71 285 261 53 0 chr5 147661943 147662053 -51968097 - MIR SINE MIR -65 143 30 848 146 0 15 chr5 147662390 147662527 -51967623 - FLAM_C SINE Alu -1 142 8 444 37 0 0 chr5 147662791 147662845 -51967305 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 574 250 6 12 chr5 147665416 147665576 -51964574 + MER5A DNA MER1_type 12 170 -19 186 43 0 0 chr5 147666726 147666749 -51963401 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 350 248 26 18 chr5 147667754 147667867 -51962283 - MIR SINE MIR -50 212 99 5126 276 107 14 chr5 147667880 147669900 -51960250 + L2 LINE L2 567 2775 -539 996 282 83 38 chr5 147669907 147670504 -51959646 + L2 LINE L2 582 3308 -5 276 266 38 0 chr5 147670515 147670594 -51959556 - MIR SINE MIR -161 101 20 207 338 0 25 chr5 147670737 147670817 -51959333 + MIR SINE MIR 5 82 -180 3877 219 57 30 chr5 147671199 147671437 -51958713 - L1MD2 LINE L1 -434 5925 5695 2057 139 7 0 chr5 147671437 147671731 -51958419 - AluSq SINE Alu -17 296 1 3877 219 57 30 chr5 147671731 147671957 -51958193 - L1MD2 LINE L1 -664 5695 5477 636 195 39 0 chr5 147671957 147672085 -51958065 - FLAM_A SINE Alu 0 133 1 3877 219 57 30 chr5 147672085 147672403 -51957747 - L1MD2 LINE L1 -882 5477 5169 2045 147 42 31 chr5 147672403 147672763 -51957387 + THE1B LTR MaLR 1 364 0 3877 219 57 30 chr5 147672763 147673663 -51956487 - L1MD2 LINE L1 -1190 5169 4196 778 223 94 0 chr5 147674596 147674829 -51955321 - L2 LINE L2 -1362 1952 1698 291 157 0 0 chr5 147674829 147674880 -51955270 + CT-rich Low_complexity Low_complexity 4 54 0 192 208 21 0 chr5 147674887 147674935 -51955215 - L2 LINE L2 -1621 1693 1645 423 79 29 0 chr5 147675030 147675103 -51955047 + MER51A LTR ERV1 1 59 -580 4346 105 29 2 chr5 147675105 147675717 -51954433 + MER51C LTR ERV1 1 629 -11 3392 291 65 24 chr5 147675727 147677120 -51953030 - L2 LINE L2 -1756 1558 108 552 280 26 36 chr5 147677943 147678136 -51952014 + MIR SINE MIR 38 228 -34 313 292 103 79 chr5 147678694 147679023 -51951127 - L2 LINE L2 0 3272 2936 569 266 14 0 chr5 147679690 147679829 -51950321 - MIR SINE MIR -12 250 110 432 302 8 8 chr5 147680743 147680869 -51949281 - L2 LINE L2 0 3272 3147 1314 266 62 64 chr5 147681238 147682080 -51948070 - L2 LINE L2 -2 3311 2462 198 0 0 0 chr5 147682080 147682102 -51948048 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1314 266 62 64 chr5 147682102 147682153 -51947997 - L2 LINE L2 -851 2462 2412 538 283 68 63 chr5 147682185 147682552 -51947598 + MLT1I LTR MaLR 19 387 -22 353 313 104 59 chr5 147682613 147683111 -51947039 - L2 LINE L2 -188 3084 2565 242 239 148 0 chr5 147683227 147683315 -51946835 + L1ME4a LINE L1 6018 6118 -3 238 387 114 29 chr5 147684550 147684961 -51945189 + L2 LINE L2 2178 2623 -691 2724 29 0 3 chr5 147685039 147685347 -51944803 + AluY SINE Alu 1 307 -4 508 343 122 21 chr5 147685383 147685768 -51944382 + L2 LINE L2 2818 3241 -31 229 220 51 0 chr5 147685782 147685841 -51944309 + MIR SINE MIR 92 153 -109 2639 76 0 15 chr5 147685924 147686266 -51943884 - L1PA6 LINE L1 0 6154 5818 361 278 83 8 chr5 147686272 147686405 -51943745 - MIR3 SINE MIR -29 179 37 2162 118 7 3 chr5 147686803 147687099 -51943051 + AluSc SINE Alu 1 297 -12 872 218 21 40 chr5 147688573 147688836 -51941314 + LTR8 LTR ERV1 59 289 -434 1136 187 80 77 chr5 147688889 147689253 -51940897 + LTR8A LTR ERV1 301 665 -62 324 0 0 0 chr5 147689257 147689293 -51940857 + (CAA)n Simple_repeat Simple_repeat 1 36 0 392 299 80 44 chr5 147689317 147689399 -51940751 + L1MC4a LINE L1 4991 5069 -1077 3030 171 52 10 chr5 147689399 147690009 -51940141 + L1MA7 LINE L1 5654 6289 -2 392 299 80 44 chr5 147690009 147690177 -51939973 + L1MC4a LINE L1 5069 5250 -896 1252 302 44 35 chr5 147690189 147690868 -51939282 + L1MC4a LINE L1 5279 5963 -1845 222 171 0 0 chr5 147690868 147690909 -51939241 + (CATATA)n Simple_repeat Simple_repeat 4 44 0 22 0 0 0 chr5 147690939 147690961 -51939189 + AT_rich Low_complexity Low_complexity 1 22 0 332 302 44 41 chr5 147692321 147692662 -51937488 + L1MC/D LINE L1 4787 5128 -1018 2147 157 142 13 chr5 147692703 147693195 -51936955 + MER39 LTR ERV1 1 707 0 310 164 71 129 chr5 147693196 147693336 -51936814 + L1MC/D LINE L1 5200 5331 -815 3573 114 15 19 chr5 147693336 147693862 -51936288 + L1PA15 LINE L1 5633 6156 -9 261 250 117 32 chr5 147693866 147694016 -51936134 + L1MC/D LINE L1 5315 5472 -865 288 57 0 0 chr5 147694361 147694396 -51935754 + L2 LINE L2 3187 3221 -92 2163 94 7 24 chr5 147694691 147694989 -51935161 + AluSx SINE Alu 1 293 -19 4034 42 0 10 chr5 147694989 147695486 -51934664 - L1P LINE L1 -865 5281 4790 1405 54 42 0 chr5 147695486 147695651 -51934499 + L1PA5 LINE L1 5972 6145 -9 29 0 0 0 chr5 147695651 147695680 -51934470 + AT_rich Low_complexity Low_complexity 1 29 0 260 208 42 0 chr5 147695907 147696003 -51934147 + (CA)n Simple_repeat Simple_repeat 1 100 0 1735 219 71 18 chr5 147696241 147696680 -51933470 + MLT1C LTR MaLR 6 467 0 271 299 81 69 chr5 147697466 147697814 -51932336 + L2 LINE L2 2624 2975 -339 345 303 66 0 chr5 147697971 147698093 -51932057 + L2 LINE L2 3180 3309 -4 197 242 21 53 chr5 147698905 147699000 -51931150 - MIR SINE MIR -21 241 150 232 279 29 29 chr5 147699103 147699207 -51930943 - L2 LINE L2 -872 2442 2339 1853 158 16 98 chr5 147699218 147699597 -51930553 + MER7A DNA MER2_type 1 346 0 254 253 220 14 chr5 147699599 147699729 -51930421 - MIR SINE MIR -54 154 3 1356 181 121 10 chr5 147700319 147700617 -51929533 + MER2 DNA MER2_type 1 331 -14 206 337 0 24 chr5 147702416 147702499 -51927651 - L2 LINE L2 -1 3312 3232 701 286 123 0 chr5 147704712 147704932 -51925218 + MIR SINE MIR 13 259 -3 2401 94 0 0 chr5 147704932 147705229 -51924921 + AluY SINE Alu 1 297 -14 323 291 48 10 chr5 147707160 147707263 -51922887 + MIR SINE MIR 91 197 -65 668 250 12 19 chr5 147707750 147707910 -51922240 - MIR SINE MIR 0 262 104 219 375 35 7 chr5 147707896 147708040 -51922110 + MIR SINE MIR 8 155 -107 * 368 323 65 19 chr5 147708050 147708205 -51921945 + MIR3 SINE MIR 47 208 0 198 0 0 0 chr5 147709188 147709210 -51920940 + (CA)n Simple_repeat Simple_repeat 1 22 0 257 51 26 0 chr5 147709698 147709737 -51920413 + (CAAAA)n Simple_repeat Simple_repeat 5 44 0 241 239 56 0 chr5 147711533 147711604 -51918546 - MIR SINE MIR -4 258 184 269 309 0 85 chr5 147712221 147712315 -51917835 + L2 LINE L2 3223 3308 -5 794 284 15 0 chr5 147712317 147712514 -51917636 + L2 LINE L2 1401 1600 -1714 2372 254 205 11 chr5 147712535 147713393 -51916757 + L2 LINE L2 1952 2976 -338 279 261 0 0 chr5 147713440 147713505 -51916645 - L2 LINE L2 -272 3041 2977 277 200 0 29 chr5 147713530 147713600 -51916550 + L1MC5 LINE L1 7610 7677 -284 1870 274 75 59 chr5 147713632 147714707 -51915443 + L1MEc LINE L1 36 1128 -5268 735 215 18 48 chr5 147714746 147714974 -51915176 + L1MC5 LINE L1 7706 7926 -35 2163 131 0 0 chr5 147715563 147715869 -51914281 - AluSg SINE Alu -4 306 1 574 294 90 35 chr5 147717777 147718122 -51912028 - L1 LINE L1 -3052 3094 2731 21 71 0 0 chr5 147718700 147718742 -51911408 + AT_rich Low_complexity Low_complexity 1 42 0 786 284 50 0 chr5 147721189 147721411 -51908739 + MIR SINE MIR 18 250 -12 203 0 37 0 chr5 147725819 147725846 -51904304 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 544 250 124 4 chr5 147726190 147726354 -51903796 + MIR SINE MIR 15 191 -67 1835 104 0 28 chr5 147730884 147731135 -51899015 + AluSx SINE Alu 37 280 -32 212 0 36 0 chr5 147731137 147731165 -51898985 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 190 225 0 0 chr5 147731395 147731435 -51898715 + L2 LINE L2 3272 3311 -2 608 290 48 44 chr5 147731762 147732014 -51898136 - MIR SINE MIR -7 255 3 23 33 0 0 chr5 147733406 147733436 -51896714 + AT_rich Low_complexity Low_complexity 1 30 0 371 292 35 44 chr5 147733779 147733892 -51896258 - L2 LINE L2 0 3272 3161 223 278 141 109 chr5 147735494 147735814 -51894336 - L2 LINE L2 0 3272 2943 388 246 146 77 chr5 147735822 147736042 -51894108 + MIR SINE MIR 28 262 0 190 154 46 62 chr5 147736062 147736127 -51894023 - L2 LINE L2 -354 2918 2855 534 278 93 42 chr5 147736845 147737104 -51893046 + L2 LINE L2 3042 3313 0 570 261 161 36 chr5 147737197 147737709 -51892441 + MLT1H1 LTR MaLR 16 555 0 309 255 32 32 chr5 147738577 147738671 -51891479 + L2 LINE L2 3200 3293 -20 188 29 0 88 chr5 147738671 147738705 -51891445 + (A)n Simple_repeat Simple_repeat 1 31 0 739 256 121 14 chr5 147738958 147739173 -51890977 - MIR SINE MIR -2 260 23 23 33 0 0 chr5 147739308 147739338 -51890812 + AT_rich Low_complexity Low_complexity 1 30 0 272 219 151 0 chr5 147739520 147739593 -51890557 - MIR SINE MIR -89 173 90 36122 41 5 1 chr5 147740131 147744451 -51885699 + L1PA4 LINE L1 1 4340 -1806 10020 34 3 1 chr5 147744581 147746472 -51883678 + L1PA4 LINE L1 4252 6147 -8 267 31 0 0 chr5 147747285 147747317 -51882833 + (GTGTG)n Simple_repeat Simple_repeat 3 34 0 600 296 34 48 chr5 147747347 147747638 -51882512 + L1ME LINE L1 5383 5669 -452 21 0 0 0 chr5 147748744 147748765 -51881385 + AT_rich Low_complexity Low_complexity 1 21 0 29 28 0 0 chr5 147748819 147748855 -51881295 + AT_rich Low_complexity Low_complexity 1 36 0 613 251 220 28 chr5 147749163 147749620 -51880530 - L2 LINE L2 -1 3312 2770 971 231 31 101 chr5 147749690 147750076 -51880074 + LTR16A1 LTR ERVL 81 439 -18 291 208 0 0 chr5 147750087 147750135 -51880015 + L2 LINE L2 3149 3196 -76 387 239 48 54 chr5 147750143 147750196 -51879954 - L2 LINE L2 -568 2746 2694 2176 106 10 10 chr5 147750196 147750497 -51879653 + AluSp SINE Alu 1 301 -12 387 239 48 54 chr5 147750497 147750511 -51879639 - L2 LINE L2 -620 2694 2681 348 24 0 0 chr5 147750511 147750552 -51879598 + (TG)n Simple_repeat Simple_repeat 1 41 0 387 239 48 54 chr5 147750552 147750650 -51879500 - L2 LINE L2 -633 2681 2581 285 308 10 19 chr5 147752114 147752205 -51877945 + MER5B DNA MER1_type 28 119 -59 2180 122 10 0 chr5 147752205 147752499 -51877651 - AluSq SINE Alu -16 297 1 285 308 10 19 chr5 147752499 147752511 -51877639 + MER5B DNA MER1_type 119 130 -48 198 0 0 0 chr5 147752511 147752533 -51877617 + (T)n Simple_repeat Simple_repeat 1 22 0 1499 154 87 113 chr5 147752545 147753005 -51877145 + LTR7 LTR ERV1 1 448 -2 8463 93 53 38 chr5 147753007 147754859 -51875291 + HERVH LTR ERV1 1 1952 -5761 243 320 27 0 chr5 147755066 147755141 -51875009 - MIR SINE MIR -1 261 185 448 330 20 20 chr5 147755348 147755545 -51874605 - MIR SINE MIR -59 203 7 229 216 0 0 chr5 147755555 147755606 -51874544 + T-rich Low_complexity Low_complexity 1 51 0 180 273 0 124 chr5 147755608 147755729 -51874421 + L2 LINE L2 3166 3271 -42 387 0 0 0 chr5 147758649 147758692 -51871458 + (CA)n Simple_repeat Simple_repeat 1 43 0 355 214 24 12 chr5 147759495 147759579 -51870571 + MIR SINE MIR 71 155 -107 1364 186 88 4 chr5 147759707 147759970 -51870180 - AluJb SINE Alu -27 285 1 965 176 0 0 chr5 147760031 147760179 -51869971 + AluJb SINE Alu 140 287 -25 187 172 17 17 chr5 147760821 147760879 -51869271 + (TA)n Simple_repeat Simple_repeat 2 59 0 432 308 0 0 chr5 147761351 147761471 -51868679 + MIR SINE MIR 114 233 -29 240 344 159 12 chr5 147761546 147761709 -51868441 - MER5A DNA MER1_type -2 187 1 1564 219 53 46 chr5 147762370 147762763 -51867387 + MSTD LTR MaLR 1 396 0 395 341 88 0 chr5 147762812 147762982 -51867168 + LTR16A LTR ERVL 28 212 -238 385 292 100 0 chr5 147763044 147763174 -51866976 + LTR16A LTR ERVL 305 447 -3 3078 324 50 33 chr5 147763178 147763751 -51866399 + HERV16 LTR ERVL 2 563 -4433 1168 242 17 21 chr5 147763751 147763991 -51866159 + MER8 DNA MER2_type 1 239 0 3078 324 50 33 chr5 147763991 147764966 -51865184 + HERV16 LTR ERVL 563 1577 -3419 2584 169 12 33 chr5 147765057 147765274 -51864876 + L1MC1 LINE L1 5859 6079 -254 2186 121 0 7 chr5 147765274 147765579 -51864571 + AluSg SINE Alu 1 303 -7 2584 169 12 33 chr5 147765579 147765846 -51864304 + L1MC1 LINE L1 6079 6333 0 2473 342 47 26 chr5 147765984 147767386 -51862764 + ERVL LTR ERVL 3208 4638 -1126 859 350 35 25 chr5 147767461 147768070 -51862080 + ERVL LTR ERVL 4744 5358 -406 389 334 124 10 chr5 147768306 147768620 -51861530 + LTR16A LTR ERVL 101 450 0 676 121 61 0 chr5 147769488 147769587 -51860563 + AluSg/x SINE Alu 196 300 -12 2064 144 3 0 chr5 147770077 147770383 -51859767 - AluSx SINE Alu -5 307 1 574 296 63 21 chr5 147770409 147770866 -51859284 + LTR33A LTR ERVL 3 477 -46 315 290 48 31 chr5 147770881 147771171 -51858979 + L1MC4a LINE L1 4909 5203 -943 2012 266 85 11 chr5 147771244 147771934 -51858216 + L1MC4a LINE L1 5292 5638 -653 22 0 0 0 chr5 147771984 147772006 -51858144 + AT_rich Low_complexity Low_complexity 1 22 0 1483 272 137 44 chr5 147772034 147773048 -51857102 + L1MC4 LINE L1 6167 7360 -682 831 206 110 116 chr5 147773031 147773556 -51856594 - L1M4 LINE L1 -2789 3357 2830 * 234 45 68 0 chr5 147773556 147773600 -51856550 + (TA)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr5 147773604 147773625 -51856525 + (GA)n Simple_repeat Simple_repeat 2 22 0 1953 124 11 0 chr5 147773625 147773898 -51856252 - AluSg SINE Alu -34 276 1 831 206 110 116 chr5 147773898 147773968 -51856182 - L1M4 LINE L1 -3317 2829 2760 366 267 10 0 chr5 147774470 147774571 -51855579 - L1M4 LINE L1 -3381 2765 2664 230 290 69 49 chr5 147774572 147774817 -51855333 + L1MC4 LINE L1 7480 7729 -313 1833 134 7 0 chr5 147774835 147775118 -51855032 - MER47A DNA MER2_type -74 292 8 1151 105 26 101 chr5 147775122 147775350 -51854800 - MER67D LTR ERV1 -303 211 1 5646 108 14 31 chr5 147775587 147775848 -51854302 - L1PA11 LINE L1 0 6174 5910 2061 148 94 38 chr5 147775848 147776274 -51853876 + LTR7 LTR ERV1 1 450 0 5646 108 14 31 chr5 147776274 147776297 -51853853 - L1PA11 LINE L1 -264 5910 5888 2155 121 3 3 chr5 147776297 147776604 -51853546 - AluSc SINE Alu -2 307 1 5646 108 14 31 chr5 147776604 147777214 -51852936 - L1PA11 LINE L1 -286 5888 5294 21 57 0 0 chr5 147777457 147777492 -51852658 + AT_rich Low_complexity Low_complexity 1 35 0 384 299 164 28 chr5 147777497 147777711 -51852439 + MIR SINE MIR 1 243 -19 2062 209 126 44 chr5 147777846 147778459 -51851691 + MLT2F LTR ERVL 1 663 0 275 267 13 13 chr5 147778612 147778687 -51851463 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 357 303 35 21 chr5 147778989 147779131 -51851019 + MIR SINE MIR 2 145 -117 791 268 57 47 chr5 147779328 147779735 -51850415 + LTR16A LTR ERVL 16 426 -24 511 219 46 26 chr5 147779746 147779897 -51850253 + L1MA10 LINE L1 6178 6331 -3 1844 154 236 60 chr5 147779988 147780441 -51849709 + LTR10A LTR ERV1 1 558 -51 2068 79 46 0 chr5 147780441 147780721 -51849429 - AluY SINE Alu -18 293 1 1844 154 236 60 chr5 147780721 147780785 -51849365 + LTR10A LTR ERV1 558 609 0 331 354 26 0 chr5 147780900 147781013 -51849137 - L2 LINE L2 -14 3258 3143 2124 138 0 0 chr5 147781817 147782115 -51848035 + AluSx SINE Alu 1 298 -14 399 324 73 27 chr5 147782484 147782703 -51847447 - MIR SINE MIR -16 246 18 787 269 126 25 chr5 147782796 147783280 -51846870 - L1MEd LINE L1 -3301 2828 2296 464 290 127 8 chr5 147783490 147783876 -51846274 + L1ME LINE L1 4729 5160 -986 454 252 56 12 chr5 147783961 147784143 -51846007 + L1ME LINE L1 5258 5462 -708 523 271 73 31 chr5 147784184 147784376 -51845774 + L1ME LINE L1 5612 5811 -351 321 248 48 56 chr5 147784500 147784625 -51845525 - L1MEd LINE L1 -5949 170 47 226 146 18 18 chr5 147785155 147785210 -51844940 + T-rich Low_complexity Low_complexity 2 56 0 4136 250 61 39 chr5 147785389 147787038 -51843112 + L1ME1 LINE L1 2341 4025 -2121 1170 120 16 22 chr5 147787041 147787225 -51842925 + AluSg/x SINE Alu 130 312 0 994 219 36 0 chr5 147787226 147787445 -51842705 + L1ME1 LINE L1 4015 4241 -1905 3100 216 63 28 chr5 147787463 147788864 -51841286 + L1ME1 LINE L1 4729 6162 -4 306 324 77 22 chr5 147788976 147789158 -51840992 - MIR SINE MIR -58 204 13 189 211 0 0 chr5 147789221 147789273 -51840877 + GA-rich Low_complexity Low_complexity 1 52 0 745 235 126 13 chr5 147789557 147789787 -51840363 - MIR SINE MIR 0 262 7 32 43 0 0 chr5 147790291 147790337 -51839813 + AT_rich Low_complexity Low_complexity 1 46 0 252 298 39 10 chr5 147791927 147792030 -51838120 - MIR SINE MIR 0 262 157 218 293 131 30 chr5 147792030 147792129 -51838021 - MER91A DNA MER1_type -1 195 87 337 331 8 16 chr5 147792180 147792304 -51837846 - MIR SINE MIR -9 253 131 443 247 55 111 chr5 147793566 147793801 -51836349 - MIR SINE MIR -20 242 21 1078 254 95 70 chr5 147794161 147794658 -51835492 + MLT1H LTR MaLR 41 549 0 21 0 0 0 chr5 147795468 147795489 -51834661 + AT_rich Low_complexity Low_complexity 1 21 0 220 336 86 26 chr5 147795857 147795973 -51834177 + L3 LINE CR1 1223 1345 -232 761 276 57 0 chr5 147796166 147796394 -51833756 + MIR SINE MIR 20 260 -2 194 267 0 0 chr5 147796496 147796541 -51833609 - MIR SINE MIR -56 206 162 382 192 27 0 chr5 147797319 147797392 -51832758 + MIR SINE MIR 178 252 -10 2606 230 65 41 chr5 147797581 147798284 -51831866 + MER72 LTR ERV1 3 722 0 40 0 0 0 chr5 147798741 147798781 -51831369 + AT_rich Low_complexity Low_complexity 1 40 0 2884 112 77 57 chr5 147799528 147800119 -51830031 - MER4B LTR ERV1 -7 772 1 455 351 50 27 chr5 147800327 147800549 -51829601 + MIR SINE MIR 2 228 -34 992 193 57 31 chr5 147800562 147800790 -51829360 - MIR SINE MIR -5 257 24 259 400 43 0 chr5 147801838 147801953 -51828197 + L2 LINE L2 3125 3244 -28 426 257 86 0 chr5 147801971 147802076 -51828074 - MER81 DNA DNA 0 114 1 4297 11 0 20 chr5 147803141 147803403 -51826747 - L1P1 LINE L1 -413 5742 5495 2853 13 0 0 chr5 147803403 147803713 -51826437 - AluYa5 SINE Alu -1 310 1 4297 11 0 20 chr5 147803713 147803991 -51826159 - L1P1 LINE L1 -660 5495 5213 4059 5 0 0 chr5 147803986 147804431 -51825719 + L1HS LINE L1 5710 6154 -1 * 183 42 0 0 chr5 147804431 147804455 -51825695 + (TAAAAA)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr5 147804733 147804756 -51825394 + AT_rich Low_complexity Low_complexity 1 23 0 858 103 0 0 chr5 147804820 147804970 -51825180 - AluSg/x SINE Alu 0 344 195 196 186 47 0 chr5 147805003 147805046 -51825104 + L2 LINE L2 3014 3058 -214 201 369 42 46 chr5 147805779 147805996 -51824154 - MIR SINE MIR -44 218 3 207 0 0 0 chr5 147806486 147806509 -51823641 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 661 177 95 6 chr5 147806680 147806838 -51823312 - Charlie4 DNA MER1_type -16 1945 1774 556 127 0 0 chr5 147806838 147806917 -51823233 + LTR5 LTR ERVK 1 79 -890 5234 50 3 0 chr5 147806945 147807584 -51822566 - HERVK LTR ERVK -1710 5533 4893 675 238 12 0 chr5 147807626 147807794 -51822356 - Charlie4 DNA MER1_type -1768 193 24 405 286 43 19 chr5 147808072 147808233 -51821917 + LTR33A LTR ERVL 345 509 -14 239 323 218 0 chr5 147808256 147808389 -51821761 + MIR SINE MIR 57 218 -44 800 222 58 0 chr5 147809445 147809616 -51820534 - MIR SINE MIR -3 259 79 960 206 90 6 chr5 147811343 147811586 -51818564 - MLT1F1 LTR MaLR -23 570 308 504 202 20 10 chr5 147811570 147811669 -51818481 - MLT1F1 LTR MaLR -462 105 6 * 1738 189 0 10 chr5 147811920 147812233 -51817917 + AluJb SINE Alu 3 312 0 280 354 54 0 chr5 147812511 147812658 -51817492 + MIR SINE MIR 101 255 -7 230 309 12 12 chr5 147812778 147812862 -51817288 + MIR3 SINE MIR 91 174 -34 249 295 26 6 chr5 147813006 147813162 -51816988 + (TG)n Simple_repeat Simple_repeat 2 160 0 1849 151 7 16 chr5 147816230 147816535 -51813615 - AluJb SINE Alu -10 302 1 28 0 0 0 chr5 147817245 147817273 -51812877 + AT_rich Low_complexity Low_complexity 1 28 0 190 289 84 0 chr5 147817745 147817828 -51812322 + MIR3 SINE MIR 117 206 -2 251 308 115 26 chr5 147819181 147819337 -51810813 + MIR3 SINE MIR 33 202 -6 541 262 24 30 chr5 147819603 147819771 -51810379 - MIR SINE MIR -95 167 1 208 53 53 0 chr5 147819887 147819925 -51810225 + A-rich Low_complexity Low_complexity 2 41 0 502 217 25 25 chr5 147820219 147820339 -51809811 - L1MD2 LINE L1 0 6359 6240 1127 190 14 14 chr5 147820870 147821086 -51809064 - MIR SINE MIR -34 228 13 327 146 0 0 chr5 147821117 147821172 -51808978 + (TCCCC)n Simple_repeat Simple_repeat 5 59 0 320 299 43 43 chr5 147821292 147821456 -51808694 + L2 LINE L2 1733 1896 -1418 286 381 0 0 chr5 147822459 147822627 -51807523 + (TGG)n Simple_repeat Simple_repeat 1 168 0 371 277 11 0 chr5 147823894 147823988 -51806162 - MIR SINE MIR -87 175 81 193 333 28 0 chr5 147825371 147825443 -51804707 + L2 LINE L2 3240 3313 0 184 292 77 77 chr5 147825581 147825776 -51804374 - L2 LINE L2 -163 3109 2915 209 270 32 0 chr5 147826121 147826184 -51803966 + L2 LINE L2 3247 3311 -2 213 346 45 40 chr5 147827074 147827276 -51802874 + L2 LINE L2 2553 2755 -559 1145 249 59 20 chr5 147827815 147828169 -51801981 - L1ME2 LINE L1 -13 6151 5784 4319 118 18 31 chr5 147828169 147828847 -51801303 - Tigger4(Zombi) DNA MER2_type 0 2731 2063 844 186 30 24 chr5 147828845 147829012 -51801138 - Tigger4(Zombi) DNA MER2_type -2542 189 22 * 1927 167 59 89 chr5 147829018 147829319 -51800831 - L1ME2 LINE L1 -1 7784 7475 901 230 0 0 chr5 147829319 147829480 -51800670 - FRAM SINE Alu -5 161 1 1927 167 59 89 chr5 147829480 147830900 -51799250 - L1ME2 LINE L1 -310 7475 6013 320 223 64 32 chr5 147830900 147830994 -51799156 - MLT1F1 LTR MaLR -435 132 36 1927 167 59 89 chr5 147830994 147832647 -51797503 - L1ME2 LINE L1 -1772 6013 4311 1232 128 55 17 chr5 147832647 147832882 -51797268 - L1MA9 LINE L1 -5 6307 6064 1927 167 59 89 chr5 147832882 147833267 -51796883 - L1ME2 LINE L1 -3474 4311 4748 923 214 7 0 chr5 147833267 147833421 -51796729 - FRAM SINE Alu -11 155 1 1927 167 59 89 chr5 147833421 147833832 -51796318 - L1ME2 LINE L1 -3036 4749 4327 * 4318 206 59 30 chr5 147833821 147835223 -51794927 - L1M4 LINE L1 -736 5936 4486 1424 241 66 86 chr5 147835228 147836973 -51793177 - L1MEc LINE L1 -3325 3319 1679 6393 117 152 94 chr5 147836989 147838593 -51791557 + pTR5 LTR ERV1 742 2438 0 10262 201 165 14 chr5 147838701 147844167 -51785983 + L1PB1 LINE L1 6 6619 -248 2239 85 0 33 chr5 147844167 147844472 -51785678 - AluSx SINE Alu -17 295 1 10262 201 165 14 chr5 147844472 147844766 -51785384 + L1PB1 LINE L1 6619 6867 0 590 259 31 26 chr5 147844888 147845081 -51785069 + MIR SINE MIR 4 197 -65 434 224 129 75 chr5 147845085 147845232 -51784918 + MER5A DNA MER1_type 32 186 -3 298 220 44 55 chr5 147845232 147845310 -51784840 + MIR SINE MIR 186 262 0 223 257 0 57 chr5 147845427 147845497 -51784653 + L2 LINE L2 3214 3279 -34 1836 244 55 24 chr5 147845732 147846367 -51783783 + L1ME3A LINE L1 5293 5947 -223 389 228 59 103 chr5 147846396 147846716 -51783434 - L1MEc LINE L1 -5086 1548 1147 521 337 48 0 chr5 147847331 147847580 -51782570 - L1MEc LINE L1 -6080 745 485 284 267 59 59 chr5 147847904 147848005 -51782145 + L2 LINE L2 3132 3232 -40 228 218 0 36 chr5 147848041 147848096 -51782054 - MIR SINE MIR -7 255 203 684 224 14 96 chr5 147848098 147848317 -51781833 - MIR SINE MIR -2 260 60 27 0 0 0 chr5 147849818 147849845 -51780305 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 147849859 147849880 -51780270 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 147850028 147850051 -51780099 + AT_rich Low_complexity Low_complexity 1 23 0 240 346 105 0 chr5 147850164 147850297 -51779853 + MIR3 SINE MIR 2 148 -60 319 308 67 0 chr5 147850311 147850415 -51779735 - MIR SINE MIR -66 196 86 400 289 25 8 chr5 147851226 147851347 -51778803 - L2 LINE L2 0 3313 3191 405 298 149 10 chr5 147851362 147851570 -51778580 + MIR SINE MIR 13 249 -13 1317 213 23 67 chr5 147851762 147852152 -51777998 + MLT1A2 LTR MaLR 2 374 0 424 261 50 38 chr5 147852915 147853153 -51776997 - L1ME4a LINE L1 -264 5857 5617 211 373 59 8 chr5 147853183 147853301 -51776849 - L2 LINE L2 -4 3268 3145 193 282 26 39 chr5 147854807 147854885 -51775265 - MER5A DNA MER1_type -35 154 78 2300 67 3 3 chr5 147855929 147856228 -51773922 - AluY SINE Alu -12 299 1 181 250 77 0 chr5 147857018 147857070 -51773080 - L2 LINE L2 0 3313 3258 6749 196 14 6 chr5 147957905 147959489 -51670661 + L1PB1 LINE L1 3894 5491 -660 42773 59 4 2 chr5 147959501 147965629 -51664521 + L1PA5 LINE L1 11 6152 -2 2203 92 0 25 chr5 147965644 147965961 -51664189 + L1PB1 LINE L1 5476 5784 -367 214 101 72 0 chr5 147965969 147966038 -51664112 + (TA)n Simple_repeat Simple_repeat 1 74 0 2608 119 5 8 chr5 147966038 147966408 -51663742 + L1PB1 LINE L1 5782 6150 -1 842 303 0 5 chr5 147966677 147966895 -51663255 + MIR SINE MIR 20 236 -26 328 262 19 39 chr5 147968007 147968110 -51662040 + L2 LINE L2 3213 3313 0 572 318 52 0 chr5 147968135 147968327 -51661823 - MIR SINE MIR -49 213 12 192 290 304 7 chr5 147969086 147969224 -51660926 + L2 LINE L2 3057 3235 -37 1941 171 14 75 chr5 147969910 147970325 -51659825 + MLT1B LTR MaLR 1 390 0 421 314 71 12 chr5 147970971 147971140 -51659010 - MIR SINE MIR -12 250 72 821 265 74 17 chr5 147971273 147971551 -51658599 + LTR33 LTR ERVL 16 324 -197 1598 172 0 46 chr5 147972612 147972762 -51657388 + L1PA16 LINE L1 5879 6010 -156 2429 28 69 0 chr5 147972762 147973052 -51657098 + AluY SINE Alu 1 310 -1 1598 172 0 46 chr5 147973052 147973203 -51656947 + L1PA16 LINE L1 6010 6166 0 1054 311 80 37 chr5 147973349 147973938 -51656212 + L1ME LINE L1 20 633 -5437 2156 179 85 15 chr5 147974023 147974482 -51655668 + Charlie1b DNA MER1_type 33 523 0 829 200 20 0 chr5 147974490 147974640 -51655510 - MER5A DNA MER1_type 0 189 37 336 298 35 64 chr5 147974492 147974663 -51655487 + MER5A DNA MER1_type 17 182 -7 * 705 308 75 27 chr5 147974694 147975067 -51655083 + LTR16A LTR ERVL 32 422 -28 5950 161 9 6 chr5 147975178 147976717 -51653433 - L1PB1 LINE L1 0 6151 4613 911 174 26 148 chr5 147976920 147977231 -51652919 - MER63 DNA MER1_type 0 1061 789 379 135 14 0 chr5 147977225 147977299 -51652851 + MER63 DNA MER1_type 813 887 -173 * 181 347 107 0 chr5 147977561 147977636 -51652514 - L2 LINE L2 -58 3214 3132 251 311 0 0 chr5 147978650 147978711 -51651439 + L2 LINE L2 3126 3186 -86 220 191 0 0 chr5 147978744 147978786 -51651364 + (TGGA)n Simple_repeat Simple_repeat 1 42 0 360 337 18 6 chr5 147978837 147979003 -51651147 - MIR SINE MIR -10 252 85 383 296 199 25 chr5 147979927 147980123 -51650027 - MIR SINE MIR -2 260 31 203 239 43 0 chr5 147980498 147980544 -51649606 + MIR3 SINE MIR 154 201 -7 348 332 135 26 chr5 147980991 147981295 -51648855 - HAL1b LINE L1 -682 666 330 295 404 39 39 chr5 147983482 147983662 -51646488 - L2 LINE L2 -20 3252 3073 3492 143 14 60 chr5 147983662 147984163 -51645987 + MLT2B3 LTR ERVL 1 524 -30 423 0 0 0 chr5 147984163 147984210 -51645940 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 1660 173 3 10 chr5 147984214 147984503 -51645647 - AluJb SINE Alu -25 287 1 3492 143 14 60 chr5 147984503 147984536 -51645614 + MLT2B3 LTR ERVL 527 515 -39 342 67 0 0 chr5 147984536 147984581 -51645569 + (TG)n Simple_repeat Simple_repeat 2 46 0 3492 143 14 60 chr5 147984581 147984621 -51645529 + MLT2B3 LTR ERVL 514 554 0 295 404 39 39 chr5 147984621 147984801 -51645349 - L2 LINE L2 -198 3074 2892 1213 206 45 87 chr5 147984801 147984945 -51645205 - MLT1A1 LTR MaLR -2 363 214 559 128 0 0 chr5 147984945 147985023 -51645127 - MADE1 DNA Mariner 0 80 3 1213 206 45 87 chr5 147985023 147985257 -51644893 - MLT1A1 LTR MaLR -151 214 1 345 331 66 78 chr5 147985261 147985581 -51644569 - L2 LINE L2 -418 2896 2581 181 333 42 0 chr5 147986321 147986393 -51643757 + MIR SINE MIR 39 113 -95 503 279 44 60 chr5 147986510 147986825 -51643325 + L1ME4a LINE L1 5549 5858 -263 366 279 27 0 chr5 147987061 147987172 -51642978 + L1MC/D LINE L1 5670 5783 -338 601 303 80 50 chr5 147987181 147987336 -51642814 - MLT1I LTR MaLR -11 398 249 1525 171 38 13 chr5 147987336 147987652 -51642498 + MER33 DNA MER1_type 1 324 0 601 303 80 50 chr5 147987652 147987833 -51642317 - MLT1I LTR MaLR -160 249 52 387 0 0 0 chr5 147987833 147987876 -51642274 + (GA)n Simple_repeat Simple_repeat 2 44 0 247 304 48 16 chr5 147987905 147988030 -51642120 + L1MC/D LINE L1 5782 5910 -1898 565 255 114 16 chr5 147988237 147988421 -51641729 + LTR33 LTR ERVL 1 202 -319 439 248 8 0 chr5 147988921 147989042 -51641108 - L1P LINE L1 -1032 5114 4993 * 931 128 85 7 chr5 147989022 147989225 -51640925 - L1P4 LINE L1 -688 5486 5264 * 4282 197 37 8 chr5 147989205 147990185 -51639965 - L1 LINE L1 -1152 4994 3987 4853 152 44 10 chr5 147990188 147991198 -51638952 + L1PA16 LINE L1 5105 6142 -24 1125 157 26 78 chr5 147991776 147991914 -51638236 + MER20 DNA MER1_type 2 125 -94 2249 120 0 0 chr5 147991914 147992215 -51637935 - AluSx SINE Alu -8 304 4 1125 157 26 78 chr5 147992215 147992306 -51637844 + MER20 DNA MER1_type 125 219 0 338 289 62 0 chr5 147992775 147992872 -51637278 + MIR SINE MIR 49 151 -111 236 158 26 0 chr5 147993424 147993462 -51636688 + L2 LINE L2 3217 3255 -17 330 214 184 10 chr5 147993511 147993609 -51636541 + L2 LINE L2 3155 3269 -3 202 241 0 69 chr5 147994223 147994281 -51635869 - L2 LINE L2 0 3272 3219 1844 111 39 0 chr5 147995033 147995312 -51634838 - L1MA8 LINE L1 -6 6285 5996 24 53 0 0 chr5 147996087 147996125 -51634025 + AT_rich Low_complexity Low_complexity 1 38 0 1913 149 10 0 chr5 147996233 147996521 -51633629 - AluSx SINE Alu -21 291 1 555 295 36 46 chr5 147996581 147996862 -51633288 - L1ME LINE L1 -302 5819 5542 2083 244 76 54 chr5 147996895 147997114 -51633036 - L1ME3A LINE L1 -10 6160 5947 2264 107 3 0 chr5 147997114 147997412 -51632738 + AluSg SINE Alu 1 299 -11 2083 244 76 54 chr5 147997412 147997972 -51632178 - L1ME3A LINE L1 -223 5947 5364 3533 118 15 55 chr5 147997972 147998633 -51631517 - L1MA4 LINE L1 -451 5849 5215 419 283 181 44 chr5 147998678 147999342 -51630808 - L1MEd LINE L1 -4869 1250 559 185 274 65 16 chr5 147999751 147999813 -51630337 - MIR SINE MIR -149 113 49 43562 34 21 1 chr5 147999822 148005852 -51624298 + L1PA2 LINE L1 1 6155 0 180 200 25 0 chr5 148005856 148005896 -51624254 + MIR SINE MIR 130 170 -92 300 296 139 9 chr5 148005896 148006011 -51624139 - L2 LINE L2 -6 3266 3137 327 150 0 0 chr5 148006086 148006146 -51624004 + (TG)n Simple_repeat Simple_repeat 2 61 0 229 235 39 144 chr5 148006156 148006219 -51623931 - L2 LINE L2 -221 3051 2983 515 179 112 128 chr5 148006219 148006398 -51623752 + MER5B DNA MER1_type 2 177 -1 3343 98 30 0 chr5 148006398 148006838 -51623312 + MLT2A2 LTR ERVL 1 453 0 229 235 39 144 chr5 148006838 148006926 -51623224 - L2 LINE L2 -287 2985 2915 652 303 50 0 chr5 148006967 148007185 -51622965 - MER112 DNA MER1_type -10 250 22 322 354 0 18 chr5 148007416 148007529 -51622621 - L2 LINE L2 0 3272 3162 809 177 182 22 chr5 148008263 148008444 -51621706 - MER2 DNA MER2_type -135 210 1 210 345 35 18 chr5 148008954 148009067 -51621083 - MIR3 SINE MIR -29 179 65 317 327 30 24 chr5 148009621 148009786 -51620364 - MIR SINE MIR -71 191 26 383 295 18 9 chr5 148010418 148010530 -51619620 - L2 LINE L2 0 3313 3201 299 244 46 30 chr5 148010535 148010666 -51619484 - L1ME LINE L1 -684 5478 5346 217 294 219 0 chr5 148010680 148010799 -51619351 - L2 LINE L2 -601 2713 2569 3399 207 66 21 chr5 148010844 148011635 -51618515 + MER99 DNA DNA 1 826 -2 262 188 14 29 chr5 148012115 148012184 -51617966 - L1ME4a LINE L1 -60 6061 5994 441 218 163 61 chr5 148012291 148012438 -51617712 + MLT1J LTR MaLR 6 167 -344 454 278 46 29 chr5 148012660 148012833 -51617317 + MLT1J LTR MaLR 328 503 -8 500 207 101 59 chr5 148014515 148014684 -51615466 - MER5B DNA MER1_type 0 178 3 209 32 0 32 chr5 148015001 148015032 -51615118 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 25 51 0 0 chr5 148015165 148015204 -51614946 + AT_rich Low_complexity Low_complexity 1 39 0 498 209 0 11 chr5 148016266 148016357 -51613793 + MER5A DNA MER1_type 34 123 -66 319 233 33 22 chr5 148016441 148016531 -51613619 + MIR SINE MIR 89 179 -83 315 342 50 19 chr5 148017261 148017422 -51612728 + MIR SINE MIR 45 210 -52 340 293 112 17 chr5 148017468 148017584 -51612566 + MIR SINE MIR 20 146 -116 271 290 16 0 chr5 148019811 148019873 -51610277 - L2 LINE L2 -8 3264 3202 254 252 117 18 chr5 148020074 148020185 -51609965 - L2 LINE L2 -323 2990 2869 878 231 231 43 chr5 148020207 148020825 -51609325 + L2 LINE L2 2333 3163 -150 1797 102 3 149 chr5 148020825 148021187 -51608963 - AluSg1 SINE Alu 0 309 1 878 231 231 43 chr5 148021187 148021355 -51608795 + L2 LINE L2 3163 3298 -15 442 253 153 50 chr5 148021357 148021457 -51608693 - L2 LINE L2 -474 2840 2752 1969 164 3 0 chr5 148021457 148021761 -51608389 - AluJb SINE Alu -7 305 1 442 253 153 50 chr5 148021761 148021921 -51608229 - L2 LINE L2 -562 2752 2553 467 276 88 18 chr5 148022235 148022300 -51607850 - LTR16A LTR ERVL 0 450 391 2077 98 4 0 chr5 148022300 148022595 -51607555 + AluSp SINE Alu 17 312 0 467 276 88 18 chr5 148022595 148022915 -51607235 - LTR16A LTR ERVL -59 391 21 276 281 35 18 chr5 148023209 148023323 -51606827 + MIR SINE MIR 39 154 -108 380 287 79 0 chr5 148024713 148024814 -51605336 + L2 LINE L2 3149 3257 -15 270 0 0 0 chr5 148024844 148024874 -51605276 + (TCCA)n Simple_repeat Simple_repeat 3 32 0 218 303 131 66 chr5 148024881 148025079 -51605071 - L2 LINE L2 -18 3254 3044 796 219 6 16 chr5 148025609 148025792 -51604358 + MLT1A1 LTR MaLR 185 365 0 342 0 0 0 chr5 148026445 148026483 -51603667 + (TG)n Simple_repeat Simple_repeat 1 38 0 566 298 44 79 chr5 148026901 148027267 -51602883 + MARNA DNA Mariner 59 411 -175 5596 126 35 31 chr5 148027284 148028189 -51601961 - L1PA15 LINE L1 -3 6162 5254 8263 186 28 19 chr5 148028196 148029970 -51600180 - L1 LINE L1 -1472 6093 4304 292 56 0 0 chr5 148029971 148030007 -51600143 + L1M LINE L1 5392 5427 -756 * 1388 167 19 0 chr5 148030006 148030264 -51599886 + L1 LINE L1 4204 4466 -1680 2661 245 75 19 chr5 148030276 148031362 -51598788 - L1 LINE L1 -3287 4278 3090 4921 161 23 42 chr5 148031369 148031740 -51598410 + L1MA9 LINE L1 4952 5329 -983 2104 178 80 10 chr5 148031740 148032138 -51598012 + MSTB LTR MaLR 1 426 0 4921 161 23 42 chr5 148032138 148033128 -51597022 + L1MA9 LINE L1 5329 6288 -24 16802 58 7 5 chr5 148034483 148037291 -51592859 + L1PA6 LINE L1 3318 6144 -10 707 36 0 0 chr5 148037212 148037296 -51592854 + L1PA6 LINE L1 6066 6149 -5 487 266 186 11 chr5 148038758 148038946 -51591204 - MIR SINE MIR -32 230 10 1232 163 0 49 chr5 148038949 148039194 -51590956 + AluJb SINE Alu 69 301 -11 491 333 32 32 chr5 148039336 148039555 -51590595 - L2 LINE L2 -228 3044 2826 366 307 61 0 chr5 148039558 148039672 -51590478 - L2 LINE L2 -1 3312 3192 943 202 22 41 chr5 148039706 148039889 -51590261 + LTR37B LTR ERV1 5 183 -285 1739 154 125 18 chr5 148039889 148040226 -51589924 - THE1C LTR MaLR -2 373 1 943 202 22 41 chr5 148040226 148040309 -51589841 + LTR37B LTR ERV1 183 266 -202 1669 243 137 27 chr5 148040324 148040888 -51589262 - MLT1E2 LTR MaLR 0 626 1 7263 116 22 8 chr5 148041038 148042390 -51587760 - L1MA1 LINE L1 -2 6300 4936 5352 158 28 58 chr5 148042389 148043536 -51586614 - L1MA1 LINE L1 -1990 4156 3045 * 356 218 109 0 chr5 148043539 148043649 -51586501 + LTR37B LTR ERV1 336 457 -11 2098 156 130 18 chr5 148044378 148044762 -51585388 - MSTA LTR MaLR -1 427 1 9782 143 16 40 chr5 148044762 148046379 -51583771 - MSTA-int LTR MaLR 0 1580 3 2146 153 137 8 chr5 148046381 148046760 -51583390 - MSTA LTR MaLR 0 428 1 2031 141 0 0 chr5 148047636 148047920 -51582230 + AluSx SINE Alu 3 286 -26 207 0 0 0 chr5 148047934 148047957 -51582193 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2517 110 0 0 chr5 148048689 148049026 -51581124 - L1PA14 LINE L1 0 6161 5825 1931 104 56 9 chr5 148049026 148049408 -51580742 - LTR7 LTR ERV1 -2 448 1 937 93 20 33 chr5 148049408 148049559 -51580591 - HERVH LTR ERV1 0 7713 7565 4519 173 40 36 chr5 148049577 148051216 -51578934 - HERVH LTR ERV1 -5546 1516 1 2067 114 44 8 chr5 148051218 148051608 -51578542 - LTR7 LTR ERV1 -2 448 1 3333 98 22 0 chr5 148051641 148052102 -51578048 - L1P4 LINE L1 -406 5755 5285 5883 54 33 0 chr5 148052464 148053163 -51576987 - LTR30 LTR ERV1 0 722 1 1400 216 143 10 chr5 148053229 148053642 -51576508 + LTR37B LTR ERV1 1 468 0 267 244 24 0 chr5 148053991 148054073 -51576077 + (TTTA)n Simple_repeat Simple_repeat 3 86 0 202 0 29 57 chr5 148054228 148054263 -51575887 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 576 245 208 25 chr5 148054338 148054420 -51575730 - MLT1J1 LTR MaLR -139 307 241 2391 61 40 0 chr5 148054420 148054717 -51575433 - AluY SINE Alu -2 309 1 576 245 208 25 chr5 148054717 148054879 -51575271 - MLT1J1 LTR MaLR -205 241 18 1961 72 4 8 chr5 148054989 148055251 -51574899 + AluY SINE Alu 42 302 -9 2372 79 7 3 chr5 148055917 148056222 -51573928 - AluY SINE Alu -5 306 1 249 381 88 0 chr5 148057607 148057754 -51572396 + L2 LINE L2 3094 3253 -19 2107 125 0 3 chr5 148058673 148058969 -51571181 - AluSx SINE Alu -17 295 1 1144 119 243 0 chr5 148060921 148061106 -51569044 - MER30 DNA MER1_type 0 230 1 859 203 7 0 chr5 148061210 148061358 -51568792 + FRAM SINE Alu 1 145 -31 458 280 21 28 chr5 148062058 148062201 -51567949 + MER117 DNA MER1_type 13 154 -43 2251 123 0 3 chr5 148063070 148063379 -51566771 + AluSc SINE Alu 1 308 -1 283 276 0 0 chr5 148063749 148063807 -51566343 + L2 LINE L2 3230 3287 -26 237 277 15 0 chr5 148063826 148063891 -51566259 + MIR SINE MIR 84 149 -113 3775 133 82 7 chr5 148064011 148064618 -51565532 - MER39B LTR ERV1 0 653 1 275 305 114 38 chr5 148064735 148064866 -51565284 + L2 LINE L2 3132 3272 0 2269 110 3 3 chr5 148065144 148065452 -51564698 + AluY SINE Alu 1 308 -3 429 250 36 48 chr5 148065999 148066098 -51564052 - L1MA10 LINE L1 0 6334 6236 1591 208 35 24 chr5 148066098 148066468 -51563682 + MLT1A2 LTR MaLR 1 374 0 429 250 36 48 chr5 148066468 148066536 -51563614 - L1MA10 LINE L1 -98 6236 6169 251 340 50 0 chr5 148067018 148067118 -51563032 + L2 LINE L2 3209 3313 0 244 284 87 24 chr5 148067597 148067724 -51562426 + L2 LINE L2 3172 3306 -7 1309 241 132 58 chr5 148067851 148068464 -51561686 - MLT1E3 LTR MaLR 0 624 1 303 189 72 63 chr5 148068473 148068584 -51561566 + MIR SINE MIR 99 210 -52 2301 50 0 11 chr5 148069340 148069618 -51560532 - AluY SINE Alu -16 295 21 389 255 35 108 chr5 148070631 148070917 -51559233 + L2 LINE L2 2814 3078 -194 276 258 16 0 chr5 148071046 148071108 -51559042 + GA-rich Low_complexity Low_complexity 2 64 0 351 276 83 14 chr5 148071257 148071402 -51558748 + MIR3 SINE MIR 13 167 -41 236 223 78 96 chr5 148071953 148072119 -51558031 + L1ME LINE L1 5743 5905 -216 22 0 0 0 chr5 148072286 148072308 -51557842 + AT_rich Low_complexity Low_complexity 1 22 0 228 279 27 82 chr5 148072351 148072498 -51557652 + MER5A DNA MER1_type 1 139 -50 268 161 32 32 chr5 148072582 148072644 -51557506 - MIR3 SINE MIR -51 157 96 201 121 0 0 chr5 148073591 148073624 -51556526 + (ATG)n Simple_repeat Simple_repeat 1 33 0 2907 114 76 7 chr5 148074043 148074492 -51555658 + L1PA13 LINE L1 5684 6163 0 1073 188 92 19 chr5 148074886 148075147 -51555003 - L1MC2 LINE L1 0 6344 6065 1425 226 67 69 chr5 148075147 148075191 -51554959 - MLT2B1 LTR ERVL -26 494 451 186 43 0 0 chr5 148075191 148075214 -51554936 + (CA)n Simple_repeat Simple_repeat 2 24 0 * 307 0 47 0 chr5 148075213 148075256 -51554894 + (GA)n Simple_repeat Simple_repeat 2 46 0 1425 226 67 69 chr5 148075214 148075706 -51554444 - MLT2B1 LTR ERVL -69 451 1 721 219 7 13 chr5 148075706 148075861 -51554289 - L1MC1 LINE L1 -275 6058 5905 423 92 31 0 chr5 148075876 148075941 -51554209 + L1M4 LINE L1 5210 5276 -870 * 513 132 0 0 chr5 148075939 148076015 -51554135 - L1MC3 LINE L1 -654 7131 7056 380 82 16 0 chr5 148076069 148076130 -51554020 + (TC)n Simple_repeat Simple_repeat 1 62 0 2981 160 36 0 chr5 148076137 148076643 -51553507 - L1MC3 LINE L1 -936 6849 6326 1741 187 49 6 chr5 148076643 148076969 -51553181 + MER2 DNA MER2_type 1 340 -5 4310 193 71 9 chr5 148076969 148077928 -51552222 - L1MC3 LINE L1 -1453 6332 5315 2651 55 3 0 chr5 148077991 148078300 -51551850 - AluY SINE Alu -1 310 1 249 33 0 0 chr5 148079481 148079494 -51550656 + (TG)n Simple_repeat Simple_repeat 1 43 0 249 33 0 0 chr5 148079494 148079524 -51550626 + (TG)n Simple_repeat Simple_repeat 1 30 0 339 25 0 0 chr5 148079553 148079593 -51550557 + (CA)n Simple_repeat Simple_repeat 1 40 0 525 260 179 15 chr5 148080156 148080352 -51549798 + MIR SINE MIR 35 262 0 13111 180 29 12 chr5 148080482 148083071 -51547079 - L1MA4A LINE L1 -197 6808 4144 1741 132 120 24 chr5 148083071 148083412 -51546738 + THE1C LTR MaLR 2 375 0 13111 180 29 12 chr5 148083412 148084384 -51545766 - L1MA4A LINE L1 -2861 4144 3190 1390 198 19 0 chr5 148084386 148084649 -51545501 - L1MA4A LINE L1 -6579 270 3 4087 240 76 7 chr5 148085162 148086243 -51543907 + MER69B DNA AcHobo 72 1226 0 209 294 22 22 chr5 148086389 148086481 -51543669 + CT-rich Low_complexity Low_complexity 4 95 0 736 252 133 70 chr5 148086662 148087194 -51542956 + MLT1L LTR MaLR 33 598 -17 341 269 0 26 chr5 148088424 148088502 -51541648 + MER69 DNA AcHobo 2 77 -2449 1398 164 102 36 chr5 148089010 148089394 -51540756 + MER69 DNA AcHobo 2102 2510 -16 252 0 0 0 chr5 148089394 148089422 -51540728 + (A)n Simple_repeat Simple_repeat 1 28 0 342 323 60 20 chr5 148089925 148090173 -51539977 + MLT1L LTR MaLR 358 615 0 2448 128 36 25 chr5 148090596 148091035 -51539115 + MER65A LTR ERV1 1 444 -1 4314 212 59 58 chr5 148091118 148092846 -51537304 + MER65A-int LTR ERV1 83 1860 -3011 791 167 50 6 chr5 148092849 148093029 -51537121 - LOR1-int LTR ERV1 -6842 1278 1091 251 217 60 0 chr5 148093020 148093103 -51537047 + MER65A-int LTR ERV1 2951 3038 -1898 * 2087 118 0 0 chr5 148093203 148093483 -51536667 + AluSx SINE Alu 1 280 -32 1861 224 80 36 chr5 148093506 148094318 -51535832 + MER65A-int LTR ERV1 3103 3959 -977 252 132 132 19 chr5 148094343 148094396 -51535754 + MER65A-int LTR ERV1 5339 5397 -934 * 1836 229 67 41 chr5 148094368 148094905 -51535245 + MER65A-int LTR ERV1 3581 4131 -740 2470 207 43 8 chr5 148094910 148095520 -51534630 + MER65A-int LTR ERV1 4241 4871 0 2469 141 32 9 chr5 148095521 148095955 -51534195 + MER65A LTR ERV1 2 445 0 552 291 81 26 chr5 148096725 148096959 -51533191 + MIR SINE MIR 4 250 -12 238 185 65 0 chr5 148096997 148097089 -51533061 + (TA)n Simple_repeat Simple_repeat 2 99 0 24 32 0 0 chr5 148097176 148097207 -51532943 + AT_rich Low_complexity Low_complexity 1 31 0 17810 198 21 7 chr5 148097543 148099231 -51530919 - L1PA15-16 LINE L1 -873 5976 4314 2165 117 27 0 chr5 148099231 148099531 -51530619 - AluSx SINE Alu -4 308 1 17810 198 21 7 chr5 148099531 148103735 -51526415 - L1PA15-16 LINE L1 -2535 4314 1 414 260 57 83 chr5 148104404 148104596 -51525554 + MIR SINE MIR 2 188 -74 233 311 108 27 chr5 148104659 148104840 -51525310 - MIR SINE MIR -58 150 3 241 260 78 0 chr5 148104874 148104951 -51525199 - MIR SINE MIR -12 250 168 41 0 0 0 chr5 148104966 148105007 -51525143 + AT_rich Low_complexity Low_complexity 1 41 0 1203 205 66 16 chr5 148106448 148106828 -51523322 + L1MB2 LINE L1 4991 5389 -757 417 206 28 19 chr5 148106991 148107098 -51523052 + L1ME LINE L1 5480 5587 -577 347 99 43 7 chr5 148107097 148107167 -51522983 + L1P LINE L1 5361 5426 -728 * 1440 158 26 52 chr5 148107167 148107207 -51522943 + L1MA10 LINE L1 5987 6027 -307 2281 163 51 33 chr5 148107207 148107656 -51522494 - MSTB2 LTR MaLR 0 457 1 1440 158 26 52 chr5 148107656 148107962 -51522188 + L1MA10 LINE L1 6027 6325 -9 3773 164 40 6 chr5 148107966 148108684 -51521466 + L1MB2 LINE L1 5429 6171 0 501 170 0 71 chr5 148108901 148109013 -51521137 + MER20 DNA MER1_type 116 219 0 349 252 92 8 chr5 148109780 148109899 -51520251 - MIR3 SINE MIR -14 194 66 2954 141 48 2 chr5 148110193 148110688 -51519462 - LTR53 LTR ERVL 0 519 2 1242 223 123 27 chr5 148110931 148111526 -51518624 - L1ME2 LINE L1 -19 6145 5483 336 287 108 67 chr5 148113510 148113778 -51516372 + L2 LINE L2 2995 3273 -40 255 125 0 0 chr5 148114411 148114451 -51515699 + (TG)n Simple_repeat Simple_repeat 1 40 0 739 240 11 0 chr5 148114632 148114807 -51515343 + MER5B DNA MER1_type 2 178 0 441 315 12 22 chr5 148114973 148115133 -51515017 + MIR SINE MIR 13 172 -36 2547 104 35 99 chr5 148115541 148116088 -51514062 + L1MA3 LINE L1 5794 6305 0 25 31 0 0 chr5 148116178 148116210 -51513940 + AT_rich Low_complexity Low_complexity 1 32 0 262 0 53 0 chr5 148116384 148116422 -51513728 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2001 124 0 4 chr5 148116427 148116700 -51513450 - AluSg SINE Alu -30 280 9 358 333 94 47 chr5 148117201 148117603 -51512547 + L1ME4a LINE L1 4412 4832 -1314 10856 157 27 35 chr5 148117678 148118845 -51511305 - L1M1 LINE L1 -743 6105 4930 2062 134 7 3 chr5 148118845 148119151 -51510999 - AluSx SINE Alu -1 311 5 10856 157 27 35 chr5 148119151 148119769 -51510381 - L1M1 LINE L1 -1918 4930 4309 186 43 0 0 chr5 148119769 148119792 -51510358 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 10856 157 27 35 chr5 148119792 148120485 -51509665 - L1M1 LINE L1 -2539 4309 3661 4351 245 65 25 chr5 148120475 148121758 -51508392 - L1M1 LINE L1 -5425 1424 91 * 327 261 92 28 chr5 148121815 148121957 -51508193 + L1ME4a LINE L1 5299 5449 -2359 570 330 38 36 chr5 148121973 148122116 -51508034 - MLT1L LTR MaLR -11 604 463 707 48 87 10 chr5 148122116 148122219 -51507931 - L1PA8 LINE L1 -13 6159 6049 570 330 38 36 chr5 148122219 148122551 -51507599 - MLT1L LTR MaLR -152 463 128 228 271 132 38 chr5 148122555 148122821 -51507329 + L1ME4a LINE L1 5588 5878 -243 300 178 82 59 chr5 148122880 148123015 -51507135 + L1ME4a LINE L1 5978 6115 -6 423 288 50 50 chr5 148123554 148123776 -51506374 - MIR SINE MIR 0 262 41 208 121 0 0 chr5 148124226 148124259 -51505891 + (CA)n Simple_repeat Simple_repeat 1 33 0 451 326 53 22 chr5 148125008 148125330 -51504820 + L1ME LINE L1 5408 5739 -382 186 133 0 0 chr5 148125475 148125505 -51504645 + (TG)n Simple_repeat Simple_repeat 1 30 0 369 355 41 5 chr5 148125861 148126058 -51504092 - MIR SINE MIR -25 237 34 998 89 0 0 chr5 148126274 148126409 -51503741 + L1PA8 LINE L1 6027 6161 -11 271 248 263 15 chr5 148128019 148128156 -51501994 + MIR SINE MIR 90 260 -2 218 271 17 0 chr5 148129666 148129725 -51500425 + MIR SINE MIR 191 250 -12 727 282 101 58 chr5 148129797 148130354 -51499796 - MLT2E LTR ERVL -23 605 25 809 92 52 78 chr5 148130854 148131007 -51499143 - L1PA8 LINE L1 0 6172 6024 691 282 25 5 chr5 148131182 148131384 -51498766 + MIR SINE MIR 7 212 -50 261 83 0 0 chr5 148131395 148131431 -51498719 + (TAA)n Simple_repeat Simple_repeat 3 38 0 400 289 137 9 chr5 148132176 148132387 -51497763 + L2 LINE L2 3008 3245 -68 295 273 33 44 chr5 148133037 148133213 -51496937 + MLT1I LTR MaLR 279 406 -3 530 283 128 33 chr5 148134336 148134439 -51495711 - L1ME4a LINE L1 -20 6101 6009 249 33 0 0 chr5 148134439 148134469 -51495681 + (TA)n Simple_repeat Simple_repeat 2 31 0 2312 63 3 0 chr5 148134469 148134754 -51495396 - AluY SINE Alu -25 286 1 530 283 128 33 chr5 148134754 148134985 -51495165 - L1ME4a LINE L1 -111 6010 5734 280 57 0 0 chr5 148135004 148135039 -51495111 + U2 snRNA snRNA 1 35 -153 21 0 0 0 chr5 148135085 148135106 -51495044 + AT_rich Low_complexity Low_complexity 1 21 0 1612 206 138 52 chr5 148136102 148136680 -51493470 + LTR27 LTR ERV1 2 629 -7 500 259 28 14 chr5 148137154 148137370 -51492780 + L1M4 LINE L1 2838 3056 -3090 3852 168 11 7 chr5 148137373 148138672 -51491478 + L1PB1 LINE L1 4488 5791 -360 378 0 0 0 chr5 148138728 148138770 -51491380 + (CA)n Simple_repeat Simple_repeat 2 43 0 2516 80 3 29 chr5 148138770 148139138 -51491012 + L1PB1 LINE L1 5792 6151 0 1809 256 121 44 chr5 148139157 148139983 -51490167 + L1M4 LINE L1 3074 4040 -2106 2358 126 5 27 chr5 148139983 148140355 -51489795 + THE1B LTR MaLR 1 364 0 1809 256 121 44 chr5 148140355 148140730 -51489420 + L1M4 LINE L1 4040 4385 -1761 1536 196 85 36 chr5 148140738 148141208 -51488942 + L1MD3 LINE L1 7337 7829 -166 238 304 281 0 chr5 148141335 148141470 -51488680 - L3 LINE CR1 -97 1480 1308 459 119 0 12 chr5 148142390 148142474 -51487676 - L1MA5 LINE L1 -2 6298 6216 340 328 25 25 chr5 148142474 148142596 -51487554 - MIR SINE MIR -57 151 30 189 204 341 0 chr5 148142938 148143026 -51487124 - MIR SINE MIR -1 261 144 249 206 320 10 chr5 148143045 148143142 -51487008 + MIR SINE MIR 21 147 -115 239 251 65 96 chr5 148143387 148143586 -51486564 - MLT1J LTR MaLR -79 432 240 181 335 104 37 chr5 148143724 148143778 -51486372 + MIR3 SINE MIR 22 71 -137 2576 150 21 0 chr5 148143778 148144197 -51485953 - MSTA LTR MaLR 0 428 1 181 335 104 37 chr5 148144197 148144306 -51485844 + MIR3 SINE MIR 71 196 -12 180 0 0 0 chr5 148144731 148144751 -51485399 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2147 80 7 4 chr5 148144753 148145029 -51485121 - AluSg SINE Alu -33 277 1 420 237 97 18 chr5 148145120 148145234 -51484916 - MIR SINE MIR -114 148 26 435 212 33 60 chr5 148146009 148146160 -51483990 + MER103 DNA DNA 4 150 -16 365 289 16 25 chr5 148146298 148146419 -51483731 + L2 LINE L2 3141 3260 -12 301 173 0 0 chr5 148146460 148146512 -51483638 + MIR SINE MIR 201 252 -10 713 245 7 0 chr5 148146517 148146660 -51483490 - MIR SINE MIR -101 161 18 462 283 157 16 chr5 148146808 148146999 -51483151 - MIR SINE MIR -14 248 31 351 324 178 5 chr5 148147249 148147434 -51482716 + MIR SINE MIR 15 231 -31 206 250 0 0 chr5 148147566 148147606 -51482544 + L2 LINE L2 3258 3297 -16 216 349 24 0 chr5 148148132 148148215 -51481935 - MIR SINE MIR -115 147 63 229 351 43 0 chr5 148148299 148148393 -51481757 + MIR SINE MIR 31 128 -80 302 323 106 11 chr5 148148419 148148608 -51481542 - MIR SINE MIR 0 262 56 224 220 68 0 chr5 148148662 148148721 -51481429 + MIR3 SINE MIR 143 205 -3 399 105 0 0 chr5 148149230 148149287 -51480863 - L1PA16 LINE L1 -22 6144 6088 354 328 40 8 chr5 148150277 148150402 -51479748 + MIR SINE MIR 48 176 -86 392 296 228 10 chr5 148151342 148151548 -51478602 - MIR SINE MIR -6 256 6 2141 109 10 26 chr5 148151834 148152136 -51478014 + AluSx SINE Alu 1 297 -15 442 278 42 80 chr5 148152177 148152389 -51477761 + MIR SINE MIR 14 217 -45 309 288 51 90 chr5 148153891 148154068 -51476082 - MER5B DNA MER1_type -5 173 4 811 198 71 39 chr5 148154080 148154262 -51475888 - MER5A DNA MER1_type -1 188 1 1052 227 37 5 chr5 148154271 148154487 -51475663 + MER58A DNA MER1_type 2 224 0 440 138 41 57 chr5 148154533 148154656 -51475494 - MER53 DNA DNA -2 187 67 555 279 15 50 chr5 148155499 148155700 -51474450 + MIR SINE MIR 69 262 0 2832 221 34 29 chr5 148155835 148157133 -51473017 + L1ME1 LINE L1 4839 6143 -23 449 204 49 43 chr5 148157005 148157167 -51472983 + L1MA10 LINE L1 6170 6332 -2 * 429 304 32 0 chr5 148158597 148158722 -51471428 - MIR SINE MIR -29 233 105 269 250 0 0 chr5 148158724 148158776 -51471374 - MER5A DNA MER1_type -1 188 137 211 256 61 49 chr5 148158860 148158942 -51471208 - MIR SINE MIR -179 83 1 228 205 27 32 chr5 148159678 148159793 -51470357 + MER5B DNA MER1_type 8 174 -4 240 186 206 20 chr5 148160042 148160144 -51470006 - L1ME4a LINE L1 -35 6086 5966 357 317 54 30 chr5 148160212 148160379 -51469771 + L2 LINE L2 3136 3306 -7 344 293 249 24 chr5 148160382 148160587 -51469563 + MIR SINE MIR 8 258 -4 2022 202 52 62 chr5 148160759 148160802 -51469348 - MLT2B3 LTR ERVL 0 554 512 315 0 0 0 chr5 148160802 148160837 -51469313 + (CA)n Simple_repeat Simple_repeat 1 35 0 2022 202 52 62 chr5 148160837 148161353 -51468797 - MLT2B3 LTR ERVL -42 512 1 2616 99 13 13 chr5 148161413 148161788 -51468362 + THE1C LTR MaLR 1 375 0 23 78 0 0 chr5 148162232 148162283 -51467867 + AT_rich Low_complexity Low_complexity 1 51 0 455 324 94 37 chr5 148162731 148162975 -51467175 + MIR SINE MIR 2 259 -3 2166 122 0 0 chr5 148163909 148164195 -51465955 + AluSx SINE Alu 1 286 -26 295 297 64 117 chr5 148164251 148164628 -51465522 - L2 LINE L2 0 3272 2916 342 303 0 22 chr5 148165114 148165203 -51464947 - L2 LINE L2 -49 3223 3137 31 92 0 0 chr5 148166258 148166345 -51463805 + AT_rich Low_complexity Low_complexity 1 87 0 263 161 0 32 chr5 148166714 148166776 -51463374 + GA-rich Low_complexity Low_complexity 5 64 0 635 297 76 36 chr5 148166894 148167197 -51462953 + L2 LINE L2 2999 3313 0 712 312 172 48 chr5 148167333 148168490 -51461660 - L2 LINE L2 -705 2609 1310 293 323 228 17 chr5 148168551 148168910 -51461240 - L2 LINE L2 -2539 775 341 618 169 62 0 chr5 148169255 148169385 -51460765 + L1PA15 LINE L1 6021 6158 -7 224 359 51 55 chr5 148170089 148170345 -51459805 + MIR SINE MIR 8 262 0 5934 106 27 1 chr5 148170705 148171684 -51458466 + L1PA15 LINE L1 5166 6165 0 189 196 0 0 chr5 148172323 148172369 -51457781 + CT-rich Low_complexity Low_complexity 2 47 0 270 330 52 35 chr5 148172376 148172491 -51457659 + L2 LINE L2 3159 3275 -38 200 202 11 138 chr5 148174009 148174103 -51456047 + L2 LINE L2 3232 3313 0 183 42 0 0 chr5 148174110 148174134 -51456016 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr5 148174448 148174477 -51455673 + AT_rich Low_complexity Low_complexity 1 29 0 13346 202 38 25 chr5 148174494 148176405 -51453745 - L1MA6 LINE L1 -65 7654 5769 1969 145 33 3 chr5 148176405 148176709 -51453441 - AluSq SINE Alu 0 313 1 13346 202 38 25 chr5 148176709 148176889 -51453261 - L1MA6 LINE L1 -1950 5769 5593 3542 32 0 5 chr5 148176889 148177320 -51452830 - L1PA4 LINE L1 -3 6152 5724 13346 202 38 25 chr5 148177320 148178413 -51451737 - L1MA6 LINE L1 -2126 5593 4515 2103 131 3 0 chr5 148178413 148178710 -51451440 - AluSp SINE Alu -9 304 7 13346 202 38 25 chr5 148178710 148180277 -51449873 - L1MA6 LINE L1 -3204 4515 2800 180 0 0 0 chr5 148180277 148180297 -51449853 + (TG)n Simple_repeat Simple_repeat 1 20 0 13346 202 38 25 chr5 148180297 148181100 -51449050 - L1MA6 LINE L1 -4919 2800 2009 1367 96 0 0 chr5 148281278 148281456 -51348694 - AluY SINE Alu -4 307 130 549 0 0 0 chr5 148281456 148281517 -51348633 + (TA)n Simple_repeat Simple_repeat 2 62 0 2757 39 0 0 chr5 148281523 148281832 -51348318 - AluY SINE Alu 0 311 3 2241 115 0 3 chr5 148281901 148282197 -51347953 - AluSc SINE Alu -14 295 1 395 313 62 0 chr5 148283123 148283251 -51346899 - L2 LINE L2 0 3272 3137 627 200 64 200 chr5 148283366 148283696 -51346454 + LTR8 LTR ERV1 1 256 -435 1648 169 69 91 chr5 148283744 148284195 -51345955 + LTR8A LTR ERV1 287 727 0 182 129 32 0 chr5 148285020 148285051 -51345099 + L2 LINE L2 3263 3294 -19 2113 176 19 3 chr5 148285191 148285550 -51344600 - MLT1A1 LTR MaLR 0 365 1 2376 183 19 2 chr5 148285550 148285961 -51344189 - MLT1A1-int LTR MaLR 0 1735 1318 227 256 26 181 chr5 148285996 148286223 -51343927 - MLT1A1-int LTR MaLR -394 1341 1150 3580 176 27 87 chr5 148286263 148286754 -51343396 - MLT1A1-int LTR MaLR -965 770 251 2019 117 39 0 chr5 148286754 148287037 -51343113 - AluSp SINE Alu -16 297 4 3580 176 27 87 chr5 148287037 148287103 -51343047 - MLT1A1-int LTR MaLR -1484 251 183 2132 156 53 26 chr5 148287103 148287521 -51342629 - MSTB1 LTR MaLR 0 432 4 3580 176 27 87 chr5 148287521 148287780 -51342370 - MLT1A1-int LTR MaLR -1552 183 2 1613 186 54 17 chr5 148287784 148288134 -51342016 - MLT1A1 LTR MaLR -2 363 1 330 276 95 0 chr5 148288212 148288328 -51341822 + L2 LINE L2 3146 3272 0 298 286 229 21 chr5 148289565 148289705 -51340445 + L1ME LINE L1 5533 5701 -420 188 256 44 88 chr5 148289773 148289910 -51340240 - L3 LINE CR1 -113 1464 1334 387 0 0 0 chr5 148291239 148291282 -51338868 + (TG)n Simple_repeat Simple_repeat 2 44 0 303 229 12 41 chr5 148291569 148291739 -51338411 + (TAA)n Simple_repeat Simple_repeat 3 167 0 327 153 66 36 chr5 148291839 148291976 -51338174 + (TATAA)n Simple_repeat Simple_repeat 5 145 0 257 343 10 0 chr5 148293574 148293676 -51336474 + MIR SINE MIR 159 261 -1 301 295 72 43 chr5 148294476 148294615 -51335535 + MIR SINE MIR 114 256 -6 2420 210 114 9 chr5 148295082 148295653 -51334497 - MER99 DNA DNA -195 633 3 2222 81 0 10 chr5 148296865 148297162 -51332988 - AluSq SINE Alu -19 294 1 207 327 0 0 chr5 148297171 148297226 -51332924 - L2 LINE L2 -573 2741 2687 493 252 43 7 chr5 148298151 148298290 -51331860 + MIR3 SINE MIR 64 207 -1 243 359 21 49 chr5 148299211 148299353 -51330797 + MIR3 SINE MIR 70 207 -1 790 287 45 16 chr5 148299806 148300053 -51330097 - MIR SINE MIR 0 262 9 286 198 11 99 chr5 148302666 148302757 -51327393 - L2 LINE L2 -5 3308 3226 382 202 0 18 chr5 148303131 148303221 -51326929 - MER5A DNA MER1_type -98 91 4 263 255 41 69 chr5 148303243 148303388 -51326762 + L2 LINE L2 2624 2764 -550 685 297 157 31 chr5 148303460 148303881 -51326269 - L2 LINE L2 0 3313 2840 634 302 95 65 chr5 148306224 148306920 -51323230 - L2 LINE L2 0 3272 2554 2752 130 112 49 chr5 148308529 148309022 -51321128 - MER1A DNA MER1_type 0 527 4 2247 117 124 16 chr5 148309068 148309454 -51320696 - MSTA LTR MaLR 0 428 1 26 19 0 58 chr5 148309786 148309809 -51320341 + AT_rich Low_complexity Low_complexity 1 24 -25 1048 229 122 66 chr5 148309809 148310244 -51319906 - MLT1J LTR MaLR 0 511 45 1919 144 17 0 chr5 148310244 148310542 -51319608 + AluSx SINE Alu 6 308 -4 1048 229 122 66 chr5 148310542 148310590 -51319560 - MLT1J LTR MaLR -466 45 1 26 19 0 58 chr5 148310590 148310618 -51319532 + AT_rich Low_complexity Low_complexity 24 49 0 624 269 56 56 chr5 148310645 148310861 -51319289 - MIR SINE MIR -16 246 31 470 333 73 18 chr5 148310919 148311192 -51318958 - MLT1K LTR MaLR 0 588 301 397 222 167 21 chr5 148313448 148313592 -51316558 + L1MEd LINE L1 13 177 -5942 281 290 20 20 chr5 148313737 148313837 -51316313 + L1MEd LINE L1 275 374 -5745 255 222 0 61 chr5 148313839 148313938 -51316212 - L1MC4 LINE L1 -1336 6706 6614 * 288 244 23 0 chr5 148313857 148313943 -51316207 + L1MC4 LINE L1 6615 6702 -1340 300 95 0 0 chr5 148314142 148314184 -51315966 - MADE1 DNA Mariner -37 43 2 676 308 50 12 chr5 148315217 148315457 -51314693 + MIR SINE MIR 14 262 0 234 359 58 34 chr5 148316433 148316639 -51313511 - MIR SINE MIR -24 238 28 24 67 0 0 chr5 148316746 148316791 -51313359 + AT_rich Low_complexity Low_complexity 1 45 0 488 309 58 31 chr5 148317887 148318078 -51312072 - MIR SINE MIR -21 241 46 3554 173 16 7 chr5 148318116 148318733 -51311417 + Tigger1 DNA MER2_type 2 624 -1794 2663 152 19 2 chr5 148318717 148319145 -51311005 + Tigger1 DNA MER2_type 1984 2418 0 * 962 293 168 11 chr5 148319234 148320106 -51310044 + L2 LINE L2 2293 3308 -5 2222 142 94 23 chr5 148320331 148320726 -51309424 + MSTC LTR MaLR 1 423 -5 361 316 102 17 chr5 148320856 148321033 -51309117 - L2 LINE L2 -54 3218 3027 469 333 72 42 chr5 148321095 148321428 -51308722 + L2 LINE L2 2957 3299 -14 203 300 10 20 chr5 148321433 148321533 -51308617 - L2 LINE L2 -437 2877 2779 322 257 14 0 chr5 148322212 148322282 -51307868 + L2 LINE L2 3193 3263 -9 228 158 0 0 chr5 148325375 148325413 -51304737 - MIR3 SINE MIR -27 181 144 295 331 83 0 chr5 148326066 148326211 -51303939 - MIR SINE MIR -27 235 79 384 331 8 8 chr5 148326492 148326613 -51303537 + MIR SINE MIR 23 143 -65 238 309 41 65 chr5 148326746 148326869 -51303281 + L2 LINE L2 3188 3307 -6 248 296 153 0 chr5 148327451 148327549 -51302601 - MIR SINE MIR -32 230 118 219 302 0 0 chr5 148327740 148327793 -51302357 + MIR SINE MIR 156 208 -54 222 235 0 0 chr5 148328766 148328817 -51301333 + T-rich Low_complexity Low_complexity 1 51 0 201 167 42 62 chr5 148329060 148329108 -51301042 - L2 LINE L2 -92 3180 3134 646 294 47 5 chr5 148329403 148329617 -51300533 - MIR SINE MIR -19 243 21 640 311 0 0 chr5 148329870 148330037 -51300113 + L2 LINE L2 3146 3312 -1 470 243 86 40 chr5 148330051 148330203 -51299947 - MIR SINE MIR -96 166 8 335 312 16 16 chr5 148332831 148332956 -51297194 - L2 LINE L2 0 3313 3189 567 319 28 9 chr5 148333208 148333424 -51296726 + MIR SINE MIR 18 237 -25 235 291 146 27 chr5 148334224 148334334 -51295816 - L2 LINE L2 -16 3297 3175 218 354 53 49 chr5 148334463 148334748 -51295402 - L2 LINE L2 -389 2925 2640 215 281 70 0 chr5 148334768 148334825 -51295325 - L2 LINE L2 -12 3301 3241 278 300 10 10 chr5 148335427 148335527 -51294623 + CT-rich Low_complexity Low_complexity 5 104 0 220 233 93 47 chr5 148335547 148335633 -51294517 + MIR SINE MIR 108 197 -65 2413 48 0 3 chr5 148336302 148336595 -51293555 + AluY SINE Alu 1 292 -19 303 318 11 0 chr5 148336602 148336690 -51293460 + MIR SINE MIR 66 154 -108 1908 172 5 37 chr5 148336786 148337164 -51292986 + MER47A DNA MER2_type 1 366 0 233 289 167 25 chr5 148338054 148338258 -51291892 - L2 LINE L2 -9 3263 3031 932 268 84 77 chr5 148338308 148338395 -51291755 - L1MC4 LINE L1 -3 8039 7954 2072 100 0 13 chr5 148338395 148338523 -51291627 + AluSq SINE Alu 9 137 -176 2275 62 3 0 chr5 148338523 148338842 -51291308 + AluY SINE Alu 1 311 0 2072 100 0 13 chr5 148338842 148339013 -51291137 + AluSq SINE Alu 137 304 -9 932 268 84 77 chr5 148339013 148339872 -51290278 - L1MC4 LINE L1 -88 7954 7086 464 300 267 3 chr5 148340025 148340388 -51289762 + L2 LINE L2 2854 3312 -1 410 169 14 0 chr5 148341542 148341613 -51288537 - MLT1I LTR MaLR -2 465 394 1657 140 104 11 chr5 148342232 148342510 -51287640 + AluJo SINE Alu 1 304 -8 273 227 11 102 chr5 148343027 148343115 -51287035 - L2 LINE L2 -6 3307 3228 532 317 53 63 chr5 148343179 148343482 -51286668 - MLT1I LTR MaLR -17 392 93 188 276 0 52 chr5 148344120 148344178 -51285972 + L2 LINE L2 3242 3296 -17 277 246 58 0 chr5 148344816 148344885 -51285265 + MIR SINE MIR 79 151 -111 207 0 0 0 chr5 148346515 148346538 -51283612 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 231 36 0 0 chr5 148346537 148346565 -51283585 + (TG)n Simple_repeat Simple_repeat 1 28 0 282 156 21 73 chr5 148346820 148346916 -51283234 - MER31-int LTR ERV1 -727 4209 4119 2094 148 0 0 chr5 148347087 148347390 -51282760 + AluSx SINE Alu 1 303 -9 724 213 62 80 chr5 148347612 148347971 -51282179 - MER31-int LTR ERV1 -1046 5552 3400 2126 136 0 0 chr5 148348278 148348579 -51281571 - AluSx SINE Alu -11 301 1 270 81 0 0 chr5 148349126 148349163 -51280987 + (CA)n Simple_repeat Simple_repeat 2 38 0 2854 13 3 0 chr5 148350259 148350572 -51279578 - AluYb8 SINE Alu -4 314 1 369 0 0 0 chr5 148350964 148351005 -51279145 + (TTA)n Simple_repeat Simple_repeat 2 42 0 6432 110 19 19 chr5 148352917 148354079 -51276071 - L1PA15 LINE L1 0 6165 4994 434 233 35 26 chr5 148354276 148354392 -51275758 + L2 LINE L2 2243 2359 -955 1054 267 108 21 chr5 148354398 148354956 -51275194 + L2 LINE L2 2597 3212 -101 556 288 165 5 chr5 148355099 148355311 -51274839 - MIR SINE MIR -16 246 1 181 302 173 29 chr5 148356152 148356291 -51273859 - MIR3 SINE MIR -20 188 30 247 234 39 39 chr5 148357382 148357459 -51272691 + L2 LINE L2 3232 3308 -5 198 286 0 18 chr5 148358230 148358286 -51271864 - L2 LINE L2 -1 3271 3217 263 302 63 0 chr5 148358619 148358682 -51271468 + L2 LINE L2 3146 3212 -60 677 295 62 5 chr5 148359206 148359416 -51270734 + MIR SINE MIR 24 245 -17 635 290 96 27 chr5 148359646 148360048 -51270102 + MLT1L LTR MaLR 72 605 -10 892 248 45 10 chr5 148360774 148361088 -51269062 - L1ME4a LINE L1 -245 5876 5552 1195 229 101 82 chr5 148361201 148361677 -51268473 - MLT1J LTR MaLR -11 500 16 229 203 51 13 chr5 148362767 148362846 -51267304 - L1ME4a LINE L1 -1887 4259 4178 44002 30 22 1 chr5 148362873 148368887 -51261263 + L1PA2 LINE L1 12 6155 0 250 344 112 18 chr5 148368895 148369119 -51261031 - MIR SINE MIR -12 250 6 11611 184 60 31 chr5 148369466 148372482 -51257668 - L1MC3 LINE L1 0 7785 4686 21 36 0 0 chr5 148372491 148372519 -51257631 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr5 148374228 148374261 -51255889 + (A)n Simple_repeat Simple_repeat 1 33 0 386 329 30 18 chr5 148374307 148374474 -51255676 + MIR SINE MIR 71 239 -23 274 234 84 75 chr5 148374608 148374715 -51255435 - L2 LINE L2 -31 3282 3175 26 30 0 0 chr5 148374715 148374748 -51255402 + AT_rich Low_complexity Low_complexity 1 33 0 235 213 67 13 chr5 148375949 148376024 -51254126 + MLT1J1 LTR MaLR 368 446 0 255 274 59 29 chr5 148376030 148376132 -51254018 - L2 LINE L2 -8 3305 3201 259 348 109 39 chr5 148376930 148377160 -51252990 - L2 LINE L2 0 3272 3027 217 250 50 25 chr5 148377558 148377638 -51252512 + L2 LINE L2 3201 3282 -31 430 349 38 29 chr5 148378814 148379023 -51251127 + MIR SINE MIR 30 240 -22 189 296 0 0 chr5 148379301 148379345 -51250805 + L2 LINE L2 3137 3180 -92 420 351 39 0 chr5 148379435 148379589 -51250561 - L2 LINE L2 -6 3266 3107 869 108 16 8 chr5 148379632 148379761 -51250389 + AluJo SINE Alu 5 134 -178 229 264 38 38 chr5 148379841 148379947 -51250203 - L2 LINE L2 -199 3073 2968 192 100 56 56 chr5 148381452 148381542 -51248608 + (TA)n Simple_repeat Simple_repeat 2 91 0 230 275 0 14 chr5 148381552 148381621 -51248529 - L1MC4 LINE L1 -1339 6703 6636 617 302 113 44 chr5 148382536 148383105 -51247045 - L1ME4a LINE L1 -188 5933 5326 720 212 0 0 chr5 148383700 148383818 -51246332 - FLAM_C SINE Alu -15 118 1 439 259 95 14 chr5 148383945 148384092 -51246058 + MIR SINE MIR 28 186 -76 881 201 10 60 chr5 148385898 148386097 -51244053 - MER3 DNA MER1_type -20 189 1 260 191 0 0 chr5 148386530 148386577 -51243573 - L2 LINE L2 0 3313 3267 359 235 0 0 chr5 148386601 148386669 -51243481 + L2 LINE L2 3246 3313 0 2224 160 30 27 chr5 148386860 148386918 -51243232 - MLT2D LTR ERVL 0 414 358 207 0 0 0 chr5 148386918 148386941 -51243209 + (GGGAGA)n Simple_repeat Simple_repeat 6 28 0 2224 160 30 27 chr5 148386941 148387288 -51242862 - MLT2D LTR ERVL -56 358 8 181 231 0 0 chr5 148387723 148387762 -51242388 + MIR SINE MIR 105 143 -119 395 212 178 68 chr5 148387845 148387963 -51242187 - FLAM_A SINE Alu -2 131 1 186 326 157 0 chr5 148387977 148388066 -51242084 + L2 LINE L2 3208 3310 -3 2861 159 42 11 chr5 148388280 148388802 -51241348 - L1MB1 LINE L1 -20 6148 5611 189 0 0 0 chr5 148389557 148389578 -51240572 + (A)n Simple_repeat Simple_repeat 1 21 0 837 285 28 16 chr5 148390273 148390522 -51239628 - MIR SINE MIR -9 253 2 842 245 121 87 chr5 148391026 148391553 -51238597 - MLT1G1 LTR MaLR 0 595 51 24 77 0 0 chr5 148391948 148392000 -51238150 + AT_rich Low_complexity Low_complexity 1 52 0 1246 268 103 35 chr5 148392219 148393102 -51237048 - L1ME3A LINE L1 -219 6020 5079 396 333 5 32 chr5 148393710 148393899 -51236251 - L1ME3A LINE L1 -4585 1811 1628 551 229 87 67 chr5 148393921 148394174 -51235976 + L1ME4a LINE L1 5658 5915 -206 260 277 25 34 chr5 148394543 148394662 -51235488 - L1M4 LINE L1 -763 5383 5266 21 0 0 0 chr5 148394741 148394762 -51235388 + AT_rich Low_complexity Low_complexity 1 21 0 1237 170 38 9 chr5 148395296 148395508 -51234642 - MER20 DNA MER1_type -1 218 1 2203 86 0 31 chr5 148398088 148398379 -51231771 - AluY SINE Alu -29 282 1 2146 142 73 59 chr5 148399144 148399566 -51230584 - MSTA LTR MaLR 0 428 1 225 0 0 0 chr5 148400301 148400326 -51229824 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 557 197 125 99 chr5 148400351 148400726 -51229424 - L1ME4a LINE L1 -23 6098 5714 479 290 111 6 chr5 148400920 148401082 -51229068 + MIR SINE MIR 15 193 -69 375 290 105 20 chr5 148401271 148401471 -51228679 + MIR SINE MIR 29 245 -17 190 361 35 55 chr5 148403306 148403561 -51226589 - L2 LINE L2 -15 3257 3008 599 244 202 26 chr5 148404034 148404346 -51225804 - L1MC4a LINE L1 -1828 5980 5614 239 342 19 13 chr5 148404794 148404952 -51225198 - HAL1b LINE L1 -458 890 732 364 301 48 40 chr5 148404954 148405203 -51224947 - HAL1b LINE L1 -727 621 371 387 0 0 0 chr5 148405215 148405258 -51224892 + (TG)n Simple_repeat Simple_repeat 2 44 0 7177 67 19 13 chr5 148405259 148406531 -51223619 - L1PA7 LINE L1 -7 6147 4873 7561 90 12 0 chr5 148406533 148407567 -51222583 + L1PA7 LINE L1 3826 4871 -1275 350 314 33 33 chr5 148407569 148407868 -51222282 - HAL1b LINE L1 -997 351 53 1914 128 28 3 chr5 148410141 148410429 -51219721 - AluSx SINE Alu -17 295 1 242 159 0 0 chr5 148410577 148410621 -51219529 + L2 LINE L2 3012 3055 -217 234 0 0 0 chr5 148462586 148462612 -51167538 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2157 120 0 0 chr5 148462614 148462897 -51167253 - AluSx SINE Alu -29 283 1 481 335 95 0 chr5 148463185 148463406 -51166744 - MIR SINE MIR 0 262 21 194 246 14 29 chr5 148463429 148463498 -51166652 + MIR SINE MIR 181 248 -14 336 281 43 58 chr5 148463651 148463790 -51166360 + MIR3 SINE MIR 58 194 -14 2387 148 12 58 chr5 148466782 148467214 -51162936 + MLT2D LTR ERVL 3 414 0 6643 214 44 25 chr5 148469105 148470691 -51159459 + L1M4 LINE L1 5 1621 -4921 8578 21 0 0 chr5 148470691 148472399 -51157751 + L1PA2 LINE L1 4448 6155 0 250 344 112 18 chr5 148472407 148472631 -51157519 - MIR SINE MIR -12 250 6 11627 183 60 31 chr5 148472978 148475994 -51154156 - L1MC3 LINE L1 0 7785 4686 21 36 0 0 chr5 148476003 148476031 -51154119 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr5 148477740 148477773 -51152377 + (A)n Simple_repeat Simple_repeat 1 33 0 386 329 30 18 chr5 148477819 148477986 -51152164 + MIR SINE MIR 71 239 -23 274 234 84 75 chr5 148478120 148478227 -51151923 - L2 LINE L2 -31 3282 3175 26 30 0 0 chr5 148478227 148478260 -51151890 + AT_rich Low_complexity Low_complexity 1 33 0 235 213 67 13 chr5 148479461 148479536 -51150614 + MLT1J1 LTR MaLR 368 446 0 255 274 59 29 chr5 148479542 148479644 -51150506 - L2 LINE L2 -8 3305 3201 259 348 109 39 chr5 148480442 148480672 -51149478 - L2 LINE L2 0 3272 3027 217 250 50 25 chr5 148481070 148481150 -51149000 + L2 LINE L2 3201 3282 -31 430 349 38 29 chr5 148482326 148482535 -51147615 + MIR SINE MIR 30 240 -22 189 296 0 0 chr5 148482813 148482857 -51147293 + L2 LINE L2 3137 3180 -92 420 351 39 0 chr5 148482947 148483101 -51147049 - L2 LINE L2 -6 3266 3107 869 108 16 8 chr5 148483144 148483273 -51146877 + AluJo SINE Alu 5 134 -178 229 264 38 38 chr5 148483353 148483459 -51146691 - L2 LINE L2 -199 3073 2968 192 100 56 56 chr5 148484964 148485054 -51145096 + (TA)n Simple_repeat Simple_repeat 2 91 0 230 275 0 14 chr5 148485064 148485133 -51145017 - L1MC4 LINE L1 -1339 6703 6636 617 302 113 44 chr5 148486048 148486617 -51143533 - L1ME4a LINE L1 -188 5933 5326 720 212 0 0 chr5 148487212 148487330 -51142820 - FLAM_C SINE Alu -15 118 1 439 259 95 14 chr5 148487457 148487604 -51142546 + MIR SINE MIR 28 186 -76 867 206 10 60 chr5 148489410 148489609 -51140541 - MER3 DNA MER1_type -20 189 1 260 191 0 0 chr5 148490042 148490089 -51140061 - L2 LINE L2 0 3313 3267 359 235 0 0 chr5 148490113 148490181 -51139969 + L2 LINE L2 3246 3313 0 2224 160 30 27 chr5 148490372 148490430 -51139720 - MLT2D LTR ERVL 0 414 358 207 0 0 0 chr5 148490430 148490453 -51139697 + (GGGAGA)n Simple_repeat Simple_repeat 6 28 0 2224 160 30 27 chr5 148490453 148490800 -51139350 - MLT2D LTR ERVL -56 358 8 181 231 0 0 chr5 148491235 148491274 -51138876 + MIR SINE MIR 105 143 -119 395 212 178 68 chr5 148491357 148491475 -51138675 - FLAM_A SINE Alu -2 131 1 186 326 157 0 chr5 148491489 148491578 -51138572 + L2 LINE L2 3208 3310 -3 2861 159 42 11 chr5 148491792 148492314 -51137836 - L1MB1 LINE L1 -20 6148 5611 189 0 0 0 chr5 148493067 148493088 -51137062 + (A)n Simple_repeat Simple_repeat 1 21 0 837 285 28 16 chr5 148493783 148494032 -51136118 - MIR SINE MIR -9 253 2 842 245 121 87 chr5 148494536 148495063 -51135087 - MLT1G1 LTR MaLR 0 595 51 24 77 0 0 chr5 148495458 148495510 -51134640 + AT_rich Low_complexity Low_complexity 1 52 0 1246 268 103 35 chr5 148495729 148496612 -51133538 - L1ME3A LINE L1 -219 6020 5079 396 333 5 32 chr5 148497220 148497409 -51132741 - L1ME3A LINE L1 -4585 1811 1628 551 229 87 67 chr5 148497431 148497684 -51132466 + L1ME4a LINE L1 5658 5915 -206 260 277 25 34 chr5 148498053 148498172 -51131978 - L1M4 LINE L1 -763 5383 5266 21 0 0 0 chr5 148498251 148498272 -51131878 + AT_rich Low_complexity Low_complexity 1 21 0 1237 170 38 9 chr5 148498806 148499018 -51131132 - MER20 DNA MER1_type -1 218 1 2203 86 0 31 chr5 148501598 148501889 -51128261 - AluY SINE Alu -29 282 1 2146 142 73 59 chr5 148502654 148503076 -51127074 - MSTA LTR MaLR 0 428 1 225 0 0 0 chr5 148503811 148503836 -51126314 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 557 197 125 99 chr5 148503861 148504236 -51125914 - L1ME4a LINE L1 -23 6098 5714 479 290 111 6 chr5 148504430 148504592 -51125558 + MIR SINE MIR 15 193 -69 375 290 105 20 chr5 148504781 148504981 -51125169 + MIR SINE MIR 29 245 -17 190 361 35 55 chr5 148506816 148507071 -51123079 - L2 LINE L2 -15 3257 3008 599 244 202 26 chr5 148507544 148507856 -51122294 - L1MC4a LINE L1 -1828 5980 5614 239 342 19 13 chr5 148508304 148508462 -51121688 - HAL1b LINE L1 -458 890 732 364 301 48 40 chr5 148508464 148508713 -51121437 - HAL1b LINE L1 -727 621 371 378 0 0 0 chr5 148508724 148508766 -51121384 + (TG)n Simple_repeat Simple_repeat 2 43 0 7177 67 19 13 chr5 148508767 148510039 -51120111 - L1PA7 LINE L1 -7 6147 4873 7561 90 12 0 chr5 148510041 148511075 -51119075 + L1PA7 LINE L1 3826 4871 -1275 350 314 33 33 chr5 148511077 148511376 -51118774 - HAL1b LINE L1 -997 351 53 1914 128 28 3 chr5 148513649 148513937 -51116213 - AluSx SINE Alu -17 295 1 242 159 0 0 chr5 148514085 148514129 -51116021 + L2 LINE L2 3012 3055 -217 241 230 74 89 chr5 148515356 148515491 -51114659 - MIR SINE MIR -112 150 18 206 320 58 19 chr5 148515547 148515650 -51114500 + MIR3 SINE MIR 10 116 -92 343 323 73 56 chr5 148515793 148516025 -51114125 - MIR SINE MIR -1 261 26 1803 107 157 0 chr5 148516038 148516299 -51113851 - AluSx SINE Alu 0 302 1 278 170 19 0 chr5 148518575 148518628 -51111522 + MIR SINE MIR 42 95 -167 348 253 68 41 chr5 148518944 148519090 -51111060 - MIR SINE MIR -13 249 100 610 328 66 50 chr5 148519097 148519768 -51110382 - L2 LINE L2 0 3272 2551 706 130 0 0 chr5 148520000 148520100 -51110050 - LTR12 LTR ERV1 0 714 615 276 275 11 0 chr5 148520102 148520193 -51109957 - LTR30 LTR ERV1 -79 643 552 815 191 80 44 chr5 148520193 148520418 -51109732 - LTR12 LTR ERV1 -429 285 53 300 192 0 0 chr5 148520418 148520470 -51109680 - LTR30 LTR ERV1 -670 52 1 505 285 118 0 chr5 148521908 148522034 -51108116 + MER3 DNA MER1_type 1 157 -52 1910 128 27 14 chr5 148522034 148522330 -51107820 - AluSq SINE Alu -13 300 1 505 285 118 0 chr5 148522330 148522389 -51107761 + MER3 DNA MER1_type 157 208 -1 584 271 130 5 chr5 148522538 148522730 -51107420 - MIR SINE MIR -16 246 31 470 308 92 18 chr5 148524759 148525094 -51105056 - L1ME4a LINE L1 -92 6029 5670 2276 83 3 3 chr5 148526851 148527141 -51103009 + AluY SINE Alu 1 290 -21 509 272 155 42 chr5 148527348 148527561 -51102589 + MIR SINE MIR 7 243 -19 246 318 62 8 chr5 148529493 148529622 -51100528 - L1ME4a LINE L1 -530 5634 5499 24 0 0 0 chr5 148529989 148530013 -51100137 + AT_rich Low_complexity Low_complexity 1 24 0 255 292 128 36 chr5 148530394 148530668 -51099482 - L1ME4a LINE L1 -1833 4313 4015 261 302 0 21 chr5 148534089 148534185 -51095965 + HAL1 LINE L1 1534 1627 -880 1785 158 138 0 chr5 148534867 148535171 -51094979 - MER7A DNA MER2_type -1 345 2 397 234 121 67 chr5 148535474 148535756 -51094394 + L1 LINE L1 2876 3172 -2974 799 233 93 6 chr5 148535848 148536020 -51094130 - MER5A DNA MER1_type -2 187 1 2275 71 134 51 chr5 148536326 148536662 -51093488 - THE1B LTR MaLR 0 364 1 261 301 23 53 chr5 148536830 148536963 -51093187 + MIR SINE MIR 86 214 -48 327 268 116 18 chr5 148537025 148537137 -51093013 + MER5C DNA MER1_type 16 138 -186 378 229 61 103 chr5 148537156 148537370 -51092780 + MIR SINE MIR 57 261 -1 4231 100 0 6 chr5 148541979 148542509 -51087641 + MER1A DNA MER1_type 1 527 0 1841 113 121 0 chr5 148543505 148543761 -51086389 - AluSc SINE Alu -12 287 1 2027 147 3 6 chr5 148543788 148544101 -51086049 + AluSq SINE Alu 1 312 -1 1022 174 0 0 chr5 148544102 148544263 -51085887 + AluJb SINE Alu 135 295 -17 280 355 78 27 chr5 148544312 148544647 -51085503 + L2 LINE L2 1984 2335 -979 226 179 18 18 chr5 148544851 148544907 -51085243 + L1MCa LINE L1 2000 2055 -4371 1030 179 25 0 chr5 148544927 148545089 -51085061 + FRAM SINE Alu 1 166 0 8488 206 67 43 chr5 148545089 148545196 -51084954 + L1MB3 LINE L1 947 1050 -5369 2342 98 3 3 chr5 148545196 148545502 -51084648 + AluSx SINE Alu 1 306 -6 8488 206 67 43 chr5 148545502 148546626 -51083524 + L1MB3 LINE L1 1050 2146 -4273 1774 126 65 0 chr5 148546626 148546887 -51083263 + AluSx SINE Alu 1 278 -34 462 18 0 0 chr5 148546893 148546948 -51083202 + (CA)n Simple_repeat Simple_repeat 2 56 0 8488 206 67 43 chr5 148546948 148547756 -51082394 + L1MB3 LINE L1 2150 2937 -3482 576 167 0 11 chr5 148547756 148547846 -51082304 + 5S rRNA rRNA 3 91 -30 8488 206 67 43 chr5 148547846 148551071 -51079079 + L1MB3 LINE L1 2937 6419 0 190 340 0 0 chr5 148551097 148551147 -51079003 + L2 LINE L2 3221 3270 -2 817 201 80 27 chr5 148551300 148551563 -51078587 - L1MB8 LINE L1 -6 6172 5896 2380 91 0 0 chr5 148551811 148552120 -51078030 - AluY SINE Alu 0 311 3 505 249 144 44 chr5 148552690 148552871 -51077279 - MIR SINE MIR -58 204 6 627 57 23 0 chr5 148552901 148552989 -51077161 + L1PA7 LINE L1 6062 6151 -3 255 233 95 60 chr5 148553279 148553395 -51076755 + MIR3 SINE MIR 77 196 -12 410 243 197 0 chr5 148555674 148555826 -51074324 + L1MEc LINE L1 447 628 -5491 492 293 59 47 chr5 148555862 148556185 -51073965 + L1MEc LINE L1 1055 1374 -4755 817 262 22 6 chr5 148556192 148556375 -51073775 - MER5A DNA MER1_type -3 186 1 428 280 66 85 chr5 148556375 148556682 -51073468 + L1MEc LINE L1 1445 1717 -861 22 80 0 0 chr5 148556985 148557035 -51073115 + AT_rich Low_complexity Low_complexity 1 50 0 1114 175 68 0 chr5 148557060 148557323 -51072827 - Charlie1 DNA MER1_type -146 2615 2335 296 279 0 0 chr5 148557323 148557384 -51072766 - Charlie1 DNA MER1_type -2699 62 2 671 253 14 14 chr5 148557524 148557670 -51072480 + AluJb SINE Alu 137 282 -30 643 306 60 65 chr5 148558259 148558674 -51071476 + L1MEd LINE L1 845 1257 -4862 2675 180 27 25 chr5 148558752 148559308 -51070842 + MER89 LTR ERV1 3 559 0 3045 188 54 60 chr5 148559308 148560190 -51069960 + MER89-int LTR ERV1 1 877 -5924 594 82 24 0 chr5 148560214 148560299 -51069851 - AluY SINE Alu -7 304 218 786 187 20 35 chr5 148560300 148560503 -51069647 + MER89-int LTR ERV1 881 1080 -5721 2655 173 35 32 chr5 148560629 148561220 -51068930 + MER89-int LTR ERV1 1067 1659 -5142 4164 169 35 26 chr5 148561255 148562130 -51068020 + MER89-int LTR ERV1 1650 2532 -4269 707 292 40 12 chr5 148562203 148562550 -51067600 + MER89-int LTR ERV1 158 2658 -4137 27741 117 18 83 chr5 148562550 148564740 -51065410 + L1PA7 LINE L1 3 2335 -3819 6247 30 1 0 chr5 148564740 148565474 -51064676 - L1PA4 LINE L1 -3 6152 5418 27741 117 18 83 chr5 148565474 148569483 -51060667 + L1PA7 LINE L1 2335 5781 -373 * 38417 54 4 3 chr5 148569482 148574579 -51055571 + L1PA4 LINE L1 1 5102 -1044 7037 28 2 0 chr5 148574579 148575407 -51054743 + L1PA4 LINE L1 5326 6155 0 2633 89 21 11 chr5 148575407 148575786 -51054364 + L1PA7 LINE L1 5769 6154 0 365 217 165 9 chr5 148575790 148575905 -51054245 + MER89-int LTR ERV1 2650 2782 -4019 1691 244 70 55 chr5 148575970 148576703 -51053447 + MER89-int LTR ERV1 2868 3611 -3190 1531 161 3 68 chr5 148576703 148577026 -51053124 - MER50 LTR ERV1 0 734 433 1193 150 8 38 chr5 148577015 148577255 -51052895 - MER50 LTR ERV1 -501 233 1 * 1054 247 57 51 chr5 148577255 148577728 -51052422 + MER89-int LTR ERV1 3608 4083 -2718 436 274 149 0 chr5 148577759 148577927 -51052223 + L1MEd LINE L1 2204 2396 -3733 257 220 22 55 chr5 148578130 148578221 -51051929 - L1MCc LINE L1 -5497 926 839 455 262 101 58 chr5 148578460 148578659 -51051491 - L1MCc LINE L1 -6044 379 159 2063 253 26 20 chr5 148578659 148579205 -51050945 + MER92C LTR ERV1 3 551 -3 455 262 101 58 chr5 148579205 148579333 -51050817 - L1MCc LINE L1 -6264 159 38 954 178 39 131 chr5 148579361 148579749 -51050401 - L1MC5 LINE L1 -915 7046 6695 2077 115 28 0 chr5 148579768 148580055 -51050095 - AluSx SINE Alu -17 295 1 670 214 70 53 chr5 148580184 148580427 -51049723 - L2 LINE L2 -1 3312 3066 374 237 43 0 chr5 148580494 148580587 -51049563 - L1MC4 LINE L1 -1340 6702 6606 203 280 130 40 chr5 148581880 148581980 -51048170 + L2 LINE L2 3133 3241 -31 2048 208 46 60 chr5 148582617 148583179 -51046971 - MLT2B3 LTR ERVL 0 554 1 6943 134 10 12 chr5 148583550 148584795 -51045355 - L1PA7 LINE L1 -3943 2203 961 * 20621 88 12 14 chr5 148584792 148586271 -51043879 + L1PA7 LINE L1 2207 3688 -2466 306 0 0 0 chr5 148586271 148586305 -51043845 + (CAA)n Simple_repeat Simple_repeat 3 36 0 20621 88 12 14 chr5 148586305 148588789 -51041361 + L1PA7 LINE L1 3688 6146 -8 1308 192 33 92 chr5 148589768 148590159 -51039991 - MLT1A2 LTR MaLR -6 368 1 180 77 0 0 chr5 148590713 148590739 -51039411 + (CA)n Simple_repeat Simple_repeat 1 26 0 322 283 47 38 chr5 148590856 148591068 -51039082 - L1M4 LINE L1 -2204 3942 3729 464 306 54 35 chr5 148591302 148591560 -51038590 + L2 LINE L2 3048 3310 -3 442 189 0 0 chr5 148591760 148591834 -51038316 + MER2 DNA MER2_type 267 340 -5 304 301 86 32 chr5 148591934 148592027 -51038123 - MIR SINE MIR -155 107 10 216 191 0 0 chr5 148592668 148592710 -51037440 - L2 LINE L2 -1 3312 3271 673 320 101 23 chr5 148593251 148593735 -51036415 - L2 LINE L2 -556 2758 2237 180 308 77 31 chr5 148593732 148593797 -51036353 - L2 LINE L2 0 3313 3246 * 241 349 19 19 chr5 148594228 148594334 -51035816 - MER5A DNA MER1_type -1 188 83 1230 164 15 27 chr5 148594425 148594688 -51035462 - L1MB3 LINE L1 -238 5945 5686 471 198 157 25 chr5 148594691 148594812 -51035338 + MER5B DNA MER1_type 40 176 -2 4370 137 13 7 chr5 148595081 148595776 -51034374 - L1PA16 LINE L1 0 6166 5468 2585 55 0 3 chr5 148596326 148596638 -51033512 - AluY SINE Alu 0 311 1 547 238 119 36 chr5 148597182 148597375 -51032775 + MIR SINE MIR 4 212 -50 521 226 70 26 chr5 148597523 148598022 -51032128 + L1MC4a LINE L1 5385 5967 -1841 1638 191 20 27 chr5 148598054 148598348 -51031802 + AluJb SINE Alu 1 292 -20 23 0 0 0 chr5 148598428 148598451 -51031699 + AT_rich Low_complexity Low_complexity 1 23 0 260 306 60 71 chr5 148598632 148598815 -51031335 + MIR3 SINE MIR 3 183 -25 515 274 75 7 chr5 148598911 148599057 -51031093 - L2 LINE L2 -14 3258 3103 6108 38 0 0 chr5 148599604 148600341 -51029809 - L1PA3 LINE L1 -3852 2294 1558 24908 35 0 4 chr5 148600341 148603336 -51026814 + L1PA3 LINE L1 2309 5304 -851 2708 39 0 0 chr5 148603336 148603643 -51026507 + AluYa8 SINE Alu 1 307 -3 24908 35 0 4 chr5 148603643 148604492 -51025658 + L1PA3 LINE L1 5304 6155 0 1892 154 0 11 chr5 148604513 148604798 -51025352 - AluSq SINE Alu -31 282 1 2398 81 3 0 chr5 148605718 148606015 -51024135 - AluSq SINE Alu -14 299 2 430 311 136 53 chr5 148607068 148607370 -51022780 + L2 LINE L2 2916 3242 -30 180 176 0 0 chr5 148607393 148607427 -51022723 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 243 256 50 50 chr5 148607609 148607730 -51022420 + HAL1b LINE L1 1222 1342 -6 281 292 60 18 chr5 148608398 148608566 -51021584 + L1MC4a LINE L1 5719 5893 -1915 21 36 0 0 chr5 148608764 148608792 -51021358 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 148608910 148608932 -51021218 + AT_rich Low_complexity Low_complexity 1 22 0 2322 111 103 18 chr5 148609914 148610312 -51019838 - MSTB1 LTR MaLR 0 432 1 212 286 16 0 chr5 148610367 148610430 -51019720 + MIR SINE MIR 73 136 -126 1580 267 40 75 chr5 148611095 148611776 -51018374 + L1ME LINE L1 4 660 -5410 656 173 0 38 chr5 148611780 148611913 -51018237 + AluJo SINE Alu 1 128 -174 604 122 31 10 chr5 148611916 148612112 -51018038 + GA-rich Low_complexity Low_complexity 1 200 0 840 194 0 61 chr5 148612119 148612319 -51017831 + AluJo SINE Alu 131 320 0 960 233 60 52 chr5 148612323 148612790 -51017360 + L1ME LINE L1 663 1089 -4981 1975 232 91 15 chr5 148612808 148613531 -51016619 + L1ME LINE L1 2775 3552 -2528 856 289 80 16 chr5 148613549 148613937 -51016213 + L1ME LINE L1 3769 4181 -1899 460 262 86 57 chr5 148614445 148614976 -51015174 + L1ME3A LINE L1 946 1343 -4862 19544 118 11 0 chr5 148615113 148618908 -51011242 + L1PA8A LINE L1 2314 6129 -2 23 0 0 0 chr5 148618921 148618944 -51011206 + AT_rich Low_complexity Low_complexity 1 23 0 761 269 60 44 chr5 148619010 148619599 -51010551 + L1ME3A LINE L1 2042 2604 -3611 1260 256 96 68 chr5 148619701 148619748 -51010402 + L1ME3A LINE L1 2791 2835 -3380 1455 199 6 19 chr5 148619748 148620064 -51010086 + AluJo SINE Alu 1 312 0 1260 256 96 68 chr5 148620064 148621046 -51009104 + L1ME3A LINE L1 2835 3849 -2366 1827 118 0 83 chr5 148621095 148621408 -51008742 + AluSx SINE Alu 21 307 -5 1157 241 22 3 chr5 148621410 148621729 -51008421 - L1MA4 LINE L1 -27 6273 5949 * 2936 277 48 37 chr5 148621724 148623391 -51006759 + L1ME3A LINE L1 3859 5537 -694 587 250 49 4 chr5 148623373 148623553 -51006597 + L1ME3A LINE L1 5855 6035 -196 * 285 229 140 73 chr5 148623599 148623778 -51006372 + L1ME3A LINE L1 6034 6224 -15 492 259 43 25 chr5 148623863 148624025 -51006125 + MLT1J LTR MaLR 347 511 0 439 338 81 57 chr5 148625886 148626392 -51003758 + L2 LINE L2 2718 3237 -35 706 323 10 0 chr5 148626436 148626631 -51003519 - MIR SINE MIR -60 202 6 297 282 206 23 chr5 148626760 148626891 -51003259 - MIR SINE MIR -57 205 51 303 293 37 12 chr5 148627418 148627500 -51002650 - L2 LINE L2 -1 3271 3188 303 255 11 32 chr5 148629161 148629255 -51000895 + GA-rich Low_complexity Low_complexity 2 93 0 238 239 28 14 chr5 148629406 148629477 -51000673 + L1MC/D LINE L1 5723 5794 -2014 255 316 226 17 chr5 148629939 148630116 -51000034 - MIR SINE MIR -24 238 25 248 387 87 13 chr5 148631257 148631567 -50998583 + L2 LINE L2 1784 2116 -1198 189 0 0 0 chr5 148631597 148631618 -50998532 + (TGG)n Simple_repeat Simple_repeat 1 21 0 196 393 25 18 chr5 148631744 148631907 -50998243 + L2 LINE L2 2392 2555 -759 204 309 44 0 chr5 148631923 148631991 -50998159 + MIR SINE MIR 85 155 -107 906 120 0 8 chr5 148632087 148632220 -50997930 - FLAM_C SINE Alu -11 132 1 3427 209 12 9 chr5 148632249 148632712 -50997438 + MER82 DNA MER2_type 1 468 -185 1944 158 16 44 chr5 148632712 148633098 -50997052 - THE1C LTR MaLR 0 375 1 3427 209 12 9 chr5 148633098 148633284 -50996866 + MER82 DNA MER2_type 468 652 -1 186 289 86 55 chr5 148633522 148633646 -50996504 + MIR SINE MIR 67 194 -68 275 255 104 125 chr5 148633646 148633838 -50996312 - MER5A DNA MER1_type -1 188 1 192 337 56 0 chr5 148633878 148633967 -50996183 - L2 LINE L2 0 3313 3220 765 204 31 0 chr5 148634552 148634713 -50995437 - MER33 DNA MER1_type -255 69 1 1337 208 72 37 chr5 148634913 148635317 -50994833 - Charlie4a DNA MER1_type -77 431 14 486 182 16 16 chr5 148635836 148635855 -50994295 - L1MA4A LINE L1 -1 6302 6284 13522 189 24 28 chr5 148635855 148636216 -50993934 - L1PB4 LINE L1 -2 6223 5862 197 65 32 0 chr5 148636216 148636247 -50993903 + (TA)n Simple_repeat Simple_repeat 1 32 0 13522 189 24 28 chr5 148636247 148637715 -50992435 - L1PB4 LINE L1 -363 5862 4390 1842 134 14 24 chr5 148637715 148638007 -50992143 + AluSg SINE Alu 1 289 -21 13522 189 24 28 chr5 148638007 148640306 -50989844 - L1PB4 LINE L1 -1835 4390 2156 485 226 87 24 chr5 148640460 148640668 -50989482 - L1ME4a LINE L1 -177 5944 5724 240 405 0 0 chr5 148640680 148640791 -50989359 + MIR SINE MIR 149 259 -3 1159 202 18 13 chr5 148640815 148641043 -50989107 - MER46A DNA MER2_type -7 229 1 239 229 125 21 chr5 148641043 148641139 -50989011 - L1ME4a LINE L1 -460 5661 5556 22 35 0 0 chr5 148641269 148641298 -50988852 + AT_rich Low_complexity Low_complexity 1 29 0 553 118 0 0 chr5 148643659 148643735 -50986415 - AluS SINE Alu -233 76 1 435 176 0 0 chr5 148643735 148643803 -50986347 - AluJ/FRAM SINE Alu -30 282 215 264 330 96 0 chr5 148644222 148644337 -50985813 + MIR SINE MIR 95 220 -42 192 362 31 8 chr5 148645377 148645504 -50984646 + L2 LINE L2 2650 2779 -535 234 333 22 0 chr5 148645663 148645753 -50984397 + L2 LINE L2 2993 3084 -188 2744 148 12 86 chr5 148648424 148648985 -50981165 - MLT2B1 LTR ERVL 0 520 1 193 176 0 0 chr5 148649931 148649965 -50980185 + L2 LINE L2 3271 3304 -9 306 252 65 37 chr5 148650389 148650496 -50979654 - MIR SINE MIR -65 143 34 491 211 149 12 chr5 148651450 148651611 -50978539 - MIR SINE MIR -78 184 2 306 173 173 0 chr5 148652562 148652643 -50977507 - MIR SINE MIR 0 262 168 556 294 38 89 chr5 148652690 148652925 -50977225 - MIR SINE MIR -21 241 19 626 198 57 90 chr5 148652938 148653115 -50977035 - MER5A DNA MER1_type -5 184 14 285 279 47 12 chr5 148653136 148653222 -50976928 - MIR SINE MIR -112 150 62 247 288 0 0 chr5 148653252 148653318 -50976832 + MIR SINE MIR 111 176 -86 1494 245 68 61 chr5 148653977 148654295 -50975855 + L1MC4a LINE L1 5610 5924 -1884 3581 151 34 20 chr5 148654295 148654982 -50975168 + L1MC1 LINE L1 5636 6331 -2 1494 245 68 61 chr5 148654982 148655029 -50975121 + L1MC4a LINE L1 5924 5969 -1839 189 0 0 0 chr5 148655029 148655050 -50975100 + (TG)n Simple_repeat Simple_repeat 2 22 0 1494 245 68 61 chr5 148655050 148655110 -50975040 + L1MC4a LINE L1 5969 6027 -1781 2653 153 7 5 chr5 148655110 148655541 -50974609 - MSTB1 LTR MaLR 0 432 1 1494 245 68 61 chr5 148655541 148655995 -50974155 + L1MC4a LINE L1 6027 6497 -1311 7150 192 76 29 chr5 148656057 148656351 -50973799 + L1MC3 LINE L1 4878 5157 -2628 2095 118 7 23 chr5 148656351 148656656 -50973494 + AluSg SINE Alu 1 300 -10 7150 192 76 29 chr5 148656656 148658492 -50971658 + L1MC3 LINE L1 5157 7105 -680 2277 60 0 17 chr5 148659569 148659867 -50970283 - L1PA7 LINE L1 -3 6151 5859 2823 179 67 12 chr5 148659868 148660511 -50969639 + L1MC3 LINE L1 7100 7777 -8 333 361 127 16 chr5 148660713 148660957 -50969193 - L3 LINE CR1 -257 1320 1050 280 219 66 58 chr5 148663030 148663167 -50966983 + MER117 DNA MER1_type 3 140 -57 28976 105 8 16 chr5 148663446 148668672 -50961478 + L1PA7 LINE L1 620 5800 -669 2301 107 0 0 chr5 148668672 148668970 -50961180 + AluSc SINE Alu 1 298 -11 28976 105 8 16 chr5 148668970 148669635 -50960515 + L1PA7 LINE L1 5800 6469 0 1627 193 3 25 chr5 148669698 148670051 -50960099 - L1MB1 LINE L1 0 6168 5824 387 248 248 0 chr5 148670126 148670267 -50959883 - MER5A DNA MER1_type 0 189 14 443 334 64 46 chr5 148670279 148670748 -50959402 + L2 LINE L2 2734 3222 -50 373 295 33 49 chr5 148671611 148671677 -50958473 - MIR SINE MIR -73 135 70 1316 203 118 39 chr5 148671677 148672110 -50958040 - MLT1C LTR MaLR 0 467 1 373 295 33 49 chr5 148672110 148672165 -50957985 - MIR SINE MIR -138 70 16 269 293 24 0 chr5 148673577 148673659 -50956491 + GA-rich Low_complexity Low_complexity 3 86 0 443 343 19 29 chr5 148673772 148673982 -50956168 + MIR SINE MIR 19 226 -36 359 265 54 48 chr5 148674966 148675113 -50955037 + MIR3 SINE MIR 30 177 -31 1745 183 28 0 chr5 148675292 148675412 -50954738 + AluJo SINE Alu 1 116 -196 189 0 0 0 chr5 148675412 148675433 -50954717 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1745 183 28 0 chr5 148675433 148675596 -50954554 + AluJo SINE Alu 116 292 -20 240 216 0 0 chr5 148677093 148677144 -50953006 + L3 LINE CR1 1524 1574 -3 23 33 0 0 chr5 148677560 148677590 -50952560 + AT_rich Low_complexity Low_complexity 1 30 0 324 339 37 0 chr5 148677629 148677738 -50952412 - L2 LINE L2 0 3272 3160 1425 211 75 65 chr5 148678089 148678595 -50951555 - MLT1J LTR MaLR 0 511 1 304 238 67 9 chr5 148678869 148678974 -50951176 - L1ME4a LINE L1 -17 6104 5994 190 333 17 0 chr5 148679188 148679248 -50950902 - L2 LINE L2 -62 3251 3191 350 342 26 8 chr5 148679605 148679722 -50950428 - MLT1K LTR MaLR -368 220 102 302 293 99 66 chr5 148680008 148680091 -50950059 - L1MC4a LINE L1 -1868 5940 5861 342 73 0 0 chr5 148680091 148680146 -50950004 + L1PA15 LINE L1 6111 6165 0 302 293 99 66 chr5 148680146 148680274 -50949876 - L1MC4a LINE L1 -1947 5861 5722 568 284 52 47 chr5 148680288 148680669 -50949481 - L1MC4a LINE L1 -463 5658 5281 329 298 70 94 chr5 148680870 148681296 -50948854 - L1MC4a LINE L1 -1038 5108 4693 2059 128 44 33 chr5 148681831 148682191 -50947959 + THE1B LTR MaLR 1 364 0 244 219 41 0 chr5 148682584 148682657 -50947493 + L1PBa LINE L1 125 200 -6663 11915 138 98 9 chr5 148682657 148685112 -50945038 + L1PBa LINE L1 634 3405 -3457 2121 139 0 3 chr5 148685112 148685422 -50944728 + AluSg1 SINE Alu 1 309 0 11915 138 98 9 chr5 148685422 148686106 -50944044 + L1PBa LINE L1 3405 4027 -2835 2103 164 5 10 chr5 148686086 148686502 -50943648 + L1 LINE L1 4397 4810 -2052 * 310 222 14 14 chr5 148787546 148787618 -50842532 + HAL1 LINE L1 1647 1718 -789 395 308 6 26 chr5 148787632 148787788 -50842362 - MIR SINE MIR -99 163 11 356 40 20 0 chr5 148788046 148788096 -50842054 + (CA)n Simple_repeat Simple_repeat 2 52 0 243 239 42 14 chr5 148788302 148788373 -50841777 + L2 LINE L2 3145 3217 -55 856 123 35 6 chr5 148788559 148788729 -50841421 + L1MA3 LINE L1 3097 3271 -2875 * 6654 119 36 5 chr5 148788728 148790108 -50840042 + L1MA3 LINE L1 4877 6305 0 440 324 55 18 chr5 148790274 148790493 -50839657 - MIR SINE MIR -7 255 29 1165 201 123 13 chr5 148790648 148790956 -50839194 + MER2 DNA MER2_type 3 344 0 362 324 88 46 chr5 148790965 148791030 -50839120 - MIR SINE MIR -32 230 169 1258 216 26 62 chr5 148791030 148791212 -50838938 + MLT1A2 LTR MaLR 1 163 -211 315 0 0 0 chr5 148791212 148791247 -50838903 + (TC)n Simple_repeat Simple_repeat 2 36 0 1258 216 26 62 chr5 148791247 148791448 -50838702 + MLT1A2 LTR MaLR 163 370 -4 362 324 88 46 chr5 148791448 148791598 -50838552 - MIR SINE MIR -93 169 6 211 324 204 0 chr5 148791908 148792050 -50838100 + L2 LINE L2 3094 3264 -8 295 183 125 50 chr5 148793940 148794060 -50836090 + LTR67 LTR ERVL 426 554 -3 343 321 76 0 chr5 148794520 148794651 -50835499 - MIR SINE MIR -71 191 51 289 318 95 29 chr5 148794903 148795145 -50835005 - L3b LINE CR1 -214 1369 1112 542 289 95 30 chr5 148796168 148796400 -50833750 + MIR SINE MIR 2 248 -14 243 0 0 0 chr5 148797126 148797153 -50832997 + (TG)n Simple_repeat Simple_repeat 2 28 0 335 257 53 26 chr5 148798813 148798926 -50831224 + L2 LINE L2 3162 3277 -36 272 296 88 0 chr5 148799074 148799199 -50830951 - MIR SINE MIR -78 184 49 183 188 0 62 chr5 148799550 148799598 -50830552 + L2 LINE L2 3204 3248 -24 415 289 98 0 chr5 148800551 148800724 -50829426 - MIR SINE MIR -15 247 58 204 306 105 16 chr5 148801465 148801589 -50828561 + MIR SINE MIR 96 230 -32 2338 106 0 3 chr5 148803250 148803562 -50826588 - AluSx SINE Alu -1 311 1 540 218 166 38 chr5 148805951 148806162 -50823988 + MIR SINE MIR 20 257 -5 225 307 79 0 chr5 148806224 148806325 -50823825 - MIR SINE MIR -4 258 150 248 313 100 43 chr5 148808226 148808456 -50821694 - L2 LINE L2 -194 3078 2836 227 258 96 76 chr5 148809813 148809874 -50820276 + L1ME LINE L1 5690 5748 -373 1399 201 37 67 chr5 148809874 148810276 -50819874 - MLT1B LTR MaLR 0 390 1 227 258 96 76 chr5 148810276 148810412 -50819738 + L1ME LINE L1 5748 5891 -230 201 320 62 10 chr5 148810414 148810511 -50819639 - MIR SINE MIR -73 135 34 250 321 107 8 chr5 148811233 148811364 -50818786 - MIR SINE MIR -112 150 7 289 301 135 18 chr5 148812349 148812512 -50817638 + MIR SINE MIR 62 243 -19 784 185 0 0 chr5 148813660 148813795 -50816355 - FLAM_C SINE Alu -8 135 1 180 337 20 30 chr5 148815405 148815506 -50814644 - MIR SINE MIR -85 123 24 * 278 293 19 38 chr5 148815500 148815606 -50814544 + L2 LINE L2 3200 3303 -10 186 305 53 42 chr5 148815641 148815736 -50814414 + L2 LINE L2 3161 3256 -16 345 375 0 0 chr5 148815913 148816041 -50814109 - L2 LINE L2 0 3272 3145 274 269 21 21 chr5 148816051 148816075 -50814075 + GA-rich Low_complexity Low_complexity 5 28 -69 2118 140 0 13 chr5 148816075 148816390 -50813760 + AluJo SINE Alu 1 311 -1 274 269 21 21 chr5 148816390 148816458 -50813692 + GA-rich Low_complexity Low_complexity 27 97 0 398 296 58 54 chr5 148816462 148816509 -50813641 - L2 LINE L2 -169 3144 3099 2315 96 3 0 chr5 148816509 148816800 -50813350 + AluSp SINE Alu 1 292 -21 398 296 58 54 chr5 148816800 148816975 -50813175 - L2 LINE L2 -214 3099 2921 374 301 127 6 chr5 148817427 148817600 -50812550 + MIR SINE MIR 20 213 -49 290 319 49 43 chr5 148819170 148819355 -50810795 - MIR SINE MIR -49 213 28 395 289 77 39 chr5 148819391 148819547 -50810603 + Charlie8 DNA MER1_type 38 199 -2218 1969 143 0 17 chr5 148820281 148820582 -50809568 + AluSq SINE Alu 1 296 -17 2444 120 0 43 chr5 148821899 148822290 -50807860 - L1PB3 LINE L1 -71 6083 5710 577 124 0 0 chr5 148822290 148822379 -50807771 - Tigger1 DNA MER2_type -675 1743 1655 2434 118 11 0 chr5 148822472 148822835 -50807315 - L1PB1 LINE L1 -2 6149 5783 371 89 73 8 chr5 148822835 148822958 -50807192 + (TA)n Simple_repeat Simple_repeat 1 131 0 595 37 106 0 chr5 148823001 148823162 -50806988 + (TA)n Simple_repeat Simple_repeat 1 178 0 25 31 0 0 chr5 148823163 148823195 -50806955 + AT_rich Low_complexity Low_complexity 1 32 0 2204 114 12 3 chr5 148823195 148823520 -50806630 + L1P5 LINE L1 5464 5791 -360 304 101 88 7 chr5 148823520 148823668 -50806482 + (TA)n Simple_repeat Simple_repeat 1 160 0 21 0 0 0 chr5 148824110 148824131 -50806019 + AT_rich Low_complexity Low_complexity 1 21 0 2188 122 0 10 chr5 148824631 148824943 -50805207 - AluSx SINE Alu -3 309 1 967 178 9 96 chr5 148824984 148825214 -50804936 + MER20 DNA MER1_type 9 218 -1 455 301 17 23 chr5 148825400 148825573 -50804577 - MIR3 SINE MIR -21 187 16 483 280 23 0 chr5 148825676 148825808 -50804342 - L2 LINE L2 0 3313 3179 281 323 40 0 chr5 148826079 148826178 -50803972 - MIR SINE MIR -70 192 90 18333 143 34 9 chr5 148826765 148830465 -50799685 + L1M1 LINE L1 752 4541 -3024 323 308 100 8 chr5 148832308 148832428 -50797722 + L2 LINE L2 2923 3053 -219 213 206 151 0 chr5 148832490 148832563 -50797587 - MIR SINE MIR -98 164 81 202 290 136 24 chr5 148832596 148832765 -50797385 + L2 LINE L2 3065 3252 -20 364 76 106 0 chr5 148833414 148833480 -50796670 + L1M1 LINE L1 2514 2586 -4979 203 306 133 0 chr5 148833523 148833621 -50796529 - MER5B DNA MER1_type -50 128 18 291 336 22 36 chr5 148833843 148833980 -50796170 + MIR SINE MIR 36 170 -92 267 50 50 0 chr5 148835036 148835076 -50795074 + L2 LINE L2 3182 3223 -49 437 279 64 69 chr5 148836835 148837286 -50792864 + L2 LINE L2 1851 2299 -1015 245 302 0 0 chr5 148837622 148837685 -50792465 - L2 LINE L2 -14 3258 3196 189 238 151 39 chr5 148838199 148838280 -50791870 + L2 LINE L2 2819 2890 -382 15452 138 15 1 chr5 148838280 148840662 -50789488 + Tigger1 DNA MER2_type 4 2418 0 189 238 151 39 chr5 148840662 148840786 -50789364 + L2 LINE L2 2890 3047 -225 447 223 69 8 chr5 148841165 148841295 -50788855 + MIR SINE MIR 63 200 -62 2086 130 19 13 chr5 148841971 148842279 -50787871 + AluSx SINE Alu 1 310 -2 241 271 0 0 chr5 148842625 148842684 -50787466 - L2 LINE L2 -565 2749 2691 267 294 59 22 chr5 148842688 148842824 -50787326 + L1ME LINE L1 5746 5886 -284 219 273 11 45 chr5 148843107 148843195 -50786955 - L2 LINE L2 -614 2700 2616 192 200 0 108 chr5 148843240 148843305 -50786845 - L2 LINE L2 -663 2651 2594 290 303 42 14 chr5 148844373 148844515 -50785635 - L2 LINE L2 -291 2981 2836 571 335 93 23 chr5 148846173 148846891 -50783259 + L2 LINE L2 2536 3305 -8 431 293 18 36 chr5 148847396 148847563 -50782587 + MIR SINE MIR 56 219 -43 537 289 25 44 chr5 148847710 148847939 -50782211 + MIR SINE MIR 30 252 -10 324 294 98 31 chr5 148848133 148848419 -50781731 - L1ME4a LINE L1 -264 5857 5553 862 285 85 9 chr5 148849533 148849873 -50780277 + L2 LINE L2 1933 2298 -1016 527 288 113 63 chr5 148849972 148850618 -50779532 + L2 LINE L2 2529 3310 -3 961 76 35 14 chr5 148850670 148850814 -50779336 - L1PA8 LINE L1 0 6172 6026 189 305 17 0 chr5 148850818 148850877 -50779273 - MIR SINE MIR -115 147 88 419 274 105 20 chr5 148854006 148854251 -50775899 + MIR SINE MIR 5 262 0 485 346 146 31 chr5 148854479 148855228 -50774922 + L2 LINE L2 2406 3232 -40 261 345 93 21 chr5 148855239 148855433 -50774717 + L3 LINE CR1 1260 1467 -110 724 281 29 21 chr5 148855844 148856082 -50774068 - MIR SINE MIR -21 241 2 666 304 20 16 chr5 148856761 148857008 -50773142 - MIR SINE MIR -1 261 14 282 248 0 99 chr5 148857693 148857794 -50772356 - L2 LINE L2 -12 3260 3170 197 230 125 50 chr5 148858348 148858449 -50771701 - MIR SINE MIR -67 141 40 2869 123 0 0 chr5 148858492 148858892 -50771258 + L1PA16 LINE L1 5758 6157 -9 412 335 11 34 chr5 148858944 148859120 -50771030 + MIR SINE MIR 20 191 -71 418 310 82 19 chr5 148861237 148861395 -50768755 + MIR SINE MIR 9 176 -86 379 149 0 95 chr5 148861397 148861471 -50768679 + MER21B LTR ERV1 1 67 -796 4559 180 28 23 chr5 148861521 148862350 -50767800 + MER21B LTR ERV1 20 852 -11 275 226 0 0 chr5 148862498 148862551 -50767599 - L2 LINE L2 -1 3271 3219 481 228 18 0 chr5 148863254 148863368 -50766782 - MIR SINE MIR -106 156 41 314 279 54 68 chr5 148863432 148863654 -50766496 - MIR SINE MIR -31 231 13 * 361 338 33 10 chr5 148863600 148863755 -50766395 + MIR SINE MIR 20 147 -61 515 290 23 40 chr5 148864189 148864365 -50765785 - MIR SINE MIR -62 200 28 261 312 9 46 chr5 148864484 148864593 -50765557 + L2 LINE L2 3168 3272 0 289 273 114 0 chr5 148865907 148865995 -50764155 - MIR SINE MIR -118 144 47 1969 152 0 0 chr5 148866449 148866739 -50763411 + AluSx SINE Alu 1 290 -22 189 167 288 0 chr5 148867469 148867535 -50762615 + MIR3 SINE MIR 118 202 -6 600 293 35 0 chr5 148867770 148867944 -50762206 - MIR SINE MIR -82 180 1 189 0 0 0 chr5 148867996 148868017 -50762133 + (GGAGAA)n Simple_repeat Simple_repeat 3 23 0 263 211 18 0 chr5 148868052 148868109 -50762041 - MER117 DNA MER1_type -37 160 103 352 285 46 6 chr5 148868165 148868280 -50761870 - MIR SINE MIR -92 116 31 390 258 230 14 chr5 148870432 148870641 -50759509 - MIR SINE MIR -7 255 2 241 162 88 29 chr5 148871535 148871603 -50758547 - Tigger8 DNA MER2_type -119 547 476 202 259 121 0 chr5 148872576 148872634 -50757516 - L3 LINE CR1 -76 1501 1437 257 274 0 0 chr5 148872740 148872802 -50757348 - L2 LINE L2 -4 3309 3248 772 229 42 51 chr5 148872811 148873047 -50757103 + MER106A DNA MER1_type 3 236 0 1119 276 61 48 chr5 148873407 148873947 -50756203 - Tigger8 DNA MER2_type -118 548 2 663 298 34 5 chr5 148875236 148875444 -50754706 + MIR SINE MIR 48 261 -1 716 223 139 0 chr5 148875658 148875824 -50754326 - MER5A DNA MER1_type 0 189 1 375 309 108 27 chr5 148876550 148876824 -50753326 + L2 LINE L2 2730 3034 -238 205 204 41 0 chr5 148877029 148877078 -50753072 + MIR3 SINE MIR 119 169 -39 2012 145 13 7 chr5 148878381 148878691 -50751459 + AluSx SINE Alu 1 312 0 1938 93 3 73 chr5 148879675 148879977 -50750173 - MER1B DNA MER1_type 0 339 59 4463 201 53 27 chr5 148880751 148881071 -50749079 - L1MD2 LINE L1 0 6619 6309 2162 114 0 10 chr5 148881071 148881369 -50748781 - AluSq SINE Alu -18 295 1 4463 201 53 27 chr5 148881369 148882897 -50747253 - L1MD2 LINE L1 -310 6309 4722 3746 135 21 17 chr5 148883103 148883628 -50746522 - MER1A DNA MER1_type 0 527 1 860 248 80 75 chr5 148883639 148884014 -50746136 - L1MD2 LINE L1 -1717 4689 4313 1203 250 73 91 chr5 148884029 148884588 -50745562 - L1MD2 LINE L1 -5853 556 8 310 219 0 73 chr5 148884676 148884758 -50745392 + MLT1F1 LTR MaLR 43 118 -449 254 254 15 0 chr5 148884763 148884830 -50745320 + L1MC4 LINE L1 7309 7376 -666 * 266 175 32 16 chr5 148884826 148884889 -50745261 + L1MD3 LINE L1 7809 7872 -123 825 284 30 24 chr5 148886014 148886571 -50743579 + MER115 DNA AcHobo 57 690 -3 740 237 68 0 chr5 148887748 148887925 -50742225 - MER5A DNA MER1_type 0 189 1 487 326 61 15 chr5 148887987 148888183 -50741967 + MIR SINE MIR 2 206 -56 309 286 75 68 chr5 148888559 148888839 -50741311 + L1MC4a LINE L1 3775 4056 -2090 279 100 25 0 chr5 148888855 148888895 -50741255 - U2 snRNA snRNA -147 41 1 2475 258 41 70 chr5 148888901 148889735 -50740415 + MER21B LTR ERV1 1 810 -53 521 321 63 57 chr5 148889777 148890220 -50739930 + L1MC4a LINE L1 4068 4507 -1639 2281 183 47 5 chr5 148890220 148890629 -50739521 - MSTB LTR MaLR 0 426 1 521 321 63 57 chr5 148890629 148891456 -50738694 + L1MC4a LINE L1 4507 5346 -800 1095 190 61 32 chr5 148891502 148891853 -50738297 + MSTD LTR MaLR 1 396 0 811 290 8 24 chr5 148891856 148892108 -50738042 + L1MC4a LINE L1 5559 5806 -2002 1628 171 3 28 chr5 148892108 148892220 -50737930 + AluJb SINE Alu 1 114 -198 2650 113 8 6 chr5 148892220 148892583 -50737567 + THE1B LTR MaLR 1 364 0 1628 171 3 28 chr5 148892583 148892756 -50737394 + AluJb SINE Alu 114 279 -33 382 271 129 54 chr5 148892772 148893012 -50737138 + L1MC4a LINE L1 5796 6053 -1755 22 56 0 0 chr5 148893067 148893103 -50737047 + AT_rich Low_complexity Low_complexity 1 36 0 278 25 0 25 chr5 148895779 148895819 -50734331 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 448 235 182 0 chr5 148895849 148895981 -50734169 - MER103 DNA DNA -3 163 8 334 346 50 15 chr5 148896178 148896380 -50733770 + MIR SINE MIR 27 235 -27 252 281 59 69 chr5 148896403 148896606 -50733544 - L3 LINE CR1 -202 1375 1175 251 208 28 28 chr5 148896944 148897016 -50733134 + MER5A DNA MER1_type 79 150 -39 2463 126 81 9 chr5 148897631 148898051 -50732099 - MSTB2 LTR MaLR -7 450 1 571 302 72 22 chr5 148898581 148898803 -50731347 + MIR SINE MIR 12 244 -18 413 277 101 51 chr5 148899230 148899526 -50730624 + L1ME4a LINE L1 5595 5825 -296 287 292 114 35 chr5 148899937 148900012 -50730138 + MIR SINE MIR 1 69 -193 1461 216 59 6 chr5 148900012 148900336 -50729814 + MER58B DNA MER1_type 1 341 0 287 292 114 35 chr5 148900336 148900462 -50729688 + MIR SINE MIR 69 218 -44 268 148 56 19 chr5 148900482 148900536 -50729614 + HsTC2 DNA Tc2 31 86 -1812 198 322 50 33 chr5 148900844 148900965 -50729185 - MIR SINE MIR -26 236 114 901 224 6 6 chr5 148901037 148901220 -50728930 - MER5A DNA MER1_type -6 183 1 437 288 48 14 chr5 148901412 148901558 -50728592 + MIR3 SINE MIR 31 181 -27 2326 104 0 3 chr5 148901946 148902245 -50727905 - AluSx SINE Alu -14 298 1 482 360 68 15 chr5 148903543 148903868 -50726282 - L3 LINE CR1 -1 1576 1235 1435 192 123 19 chr5 148906330 148906689 -50723461 - MSTD LTR MaLR 0 396 1 1629 184 34 25 chr5 148907296 148907649 -50722501 + MLT1A1 LTR MaLR 10 365 0 264 270 153 36 chr5 148908182 148908319 -50721831 - MIR SINE MIR -108 154 2 4057 68 0 0 chr5 148909167 148909671 -50720479 + L1PA7 LINE L1 5651 6154 0 180 77 0 0 chr5 148909708 148909734 -50720416 + (A)n Simple_repeat Simple_repeat 1 26 0 392 339 0 0 chr5 148910089 148910201 -50719949 - MIR3 SINE MIR -32 176 65 253 245 63 31 chr5 148910288 148910449 -50719701 + L1MC/D LINE L1 5715 5883 -283 566 281 128 10 chr5 148912914 148913110 -50717040 - MIR SINE MIR -12 250 32 444 190 146 22 chr5 148913208 148913345 -50716805 + MER103 DNA DNA 7 160 -6 268 279 135 10 chr5 148915877 148915981 -50714169 + L2 LINE L2 3142 3258 -14 1983 133 3 7 chr5 148920702 148920987 -50709163 + AluSx SINE Alu 1 284 -28 324 0 0 0 chr5 148920987 148921023 -50709127 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 256 183 54 11 chr5 148921347 148921440 -50708710 + (TA)n Simple_repeat Simple_repeat 1 97 0 588 288 88 0 chr5 148924352 148924557 -50705593 + MIR SINE MIR 27 249 -13 492 187 58 19 chr5 148925437 148925592 -50704558 - MER5B DNA MER1_type 0 178 18 282 340 43 29 chr5 148926172 148926381 -50703769 + L2 LINE L2 2853 3064 -208 871 182 14 14 chr5 148927037 148927185 -50702965 - AluJo SINE Alu -20 292 145 1105 138 0 0 chr5 148927285 148927437 -50702713 - AluJo SINE Alu -149 163 12 446 270 32 34 chr5 148927447 148927609 -50702541 - MIR SINE MIR -45 163 2 221 278 37 0 chr5 148927783 148927837 -50702313 + MIR SINE MIR 117 172 -90 208 147 0 0 chr5 148930481 148930515 -50699635 + MIR3 SINE MIR 169 202 -6 258 116 0 0 chr5 148931255 148931298 -50698852 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 429 268 143 6 chr5 148932115 148932283 -50697867 + MIR SINE MIR 68 258 -4 2122 141 0 3 chr5 148933565 148933878 -50696272 + AluSx SINE Alu 1 312 0 383 381 16 5 chr5 148934117 148934311 -50695839 - MIR SINE MIR -6 256 61 490 255 150 13 chr5 148936018 148936171 -50693979 - MER58C DNA MER1_type -15 200 27 404 282 101 27 chr5 148936174 148936362 -50693788 - MIR SINE MIR -43 219 18 368 342 48 0 chr5 148936520 148936707 -50693443 + MER91A DNA MER1_type 1 196 0 313 327 79 25 chr5 148939118 148939320 -50690830 + MIR SINE MIR 2 214 -48 21 57 0 0 chr5 148939360 148939395 -50690755 + AT_rich Low_complexity Low_complexity 1 35 0 1486 264 56 54 chr5 148939814 148940752 -50689398 + L1ME3A LINE L1 5148 6160 -10 495 299 134 0 chr5 148941028 148941245 -50688905 - MIR SINE MIR 0 262 17 336 306 87 23 chr5 148941378 148941551 -50688599 - MIR SINE MIR -19 243 60 604 280 159 36 chr5 148941918 148942339 -50687811 + MLT1K LTR MaLR 109 581 -7 288 0 0 0 chr5 148942560 148942592 -50687558 + (A)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr5 148943210 148943235 -50686915 + (T)n Simple_repeat Simple_repeat 1 25 0 380 228 35 44 chr5 148943569 148943683 -50686467 - MER5A DNA MER1_type -7 182 70 849 197 44 49 chr5 148943818 148943850 -50686300 + MER3 DNA MER1_type 1 32 -177 2384 46 11 3 chr5 148943850 148944132 -50686018 + AluY SINE Alu 3 286 -25 849 197 44 49 chr5 148944132 148944302 -50685848 + MER3 DNA MER1_type 32 202 -7 309 345 21 13 chr5 148944479 148944628 -50685522 - MIR SINE MIR -65 143 3 790 257 108 45 chr5 148944803 148945227 -50684923 + L2 LINE L2 2807 3257 -56 22 0 0 0 chr5 148945899 148945921 -50684229 + AT_rich Low_complexity Low_complexity 1 22 0 219 267 30 85 chr5 148945958 148946029 -50684121 - MIR SINE MIR -60 202 129 2056 176 22 3 chr5 148946029 148946387 -50683763 + MLT1A1 LTR MaLR 1 365 0 219 267 30 85 chr5 148946387 148946480 -50683670 - MIR SINE MIR -133 129 47 189 255 31 0 chr5 148947102 148947200 -50682950 + (TA)n Simple_repeat Simple_repeat 2 102 0 295 336 0 0 chr5 148947244 148947348 -50682802 + (TA)n Simple_repeat Simple_repeat 2 105 0 437 286 1 4 chr5 148948109 148948257 -50681893 + MIR SINE MIR 31 177 -31 2444 276 58 44 chr5 148948392 148951055 -50679095 - L1ME LINE L1 -3277 2803 132 180 0 0 0 chr5 148951750 148951770 -50678380 + (T)n Simple_repeat Simple_repeat 1 20 0 2306 71 0 34 chr5 148952402 148952740 -50677410 + AluY SINE Alu 1 328 0 384 265 93 31 chr5 148953070 148953232 -50676918 - MIR SINE MIR -71 191 20 304 322 102 11 chr5 148953439 148953616 -50676534 - MIR SINE MIR -21 241 49 293 232 88 32 chr5 148954190 148954315 -50675835 - L1ME4a LINE L1 0 6121 5990 273 274 69 0 chr5 148954883 148954985 -50675165 + MIR SINE MIR 60 168 -94 772 233 29 6 chr5 148955002 148955174 -50674976 - MLT1C LTR MaLR 0 467 292 593 256 102 39 chr5 148955322 148955576 -50674574 - MLT1C LTR MaLR -156 311 42 2891 263 86 26 chr5 148955890 148957022 -50673128 + MER69B DNA AcHobo 2 1226 0 230 343 143 19 chr5 148957117 148957222 -50672928 + MIR SINE MIR 30 147 -115 315 200 29 14 chr5 148958107 148958177 -50671973 + MIR SINE MIR 178 248 -14 1581 219 121 31 chr5 148958394 148958874 -50671276 + LTR33A LTR ERVL 1 523 0 440 187 82 64 chr5 148959042 148959213 -50670937 + L1ME4a LINE L1 5948 6121 0 448 306 106 17 chr5 148959773 148959953 -50670197 + MIR SINE MIR 49 244 -18 592 260 78 32 chr5 148960155 148960374 -50669776 + MIR SINE MIR 21 249 -13 310 277 0 0 chr5 148961480 148961545 -50668605 - MER5B DNA MER1_type -3 175 111 601 235 132 21 chr5 148961788 148962069 -50668081 - L1ME4a LINE L1 -44 6077 5766 334 301 41 8 chr5 148964591 148964714 -50665436 + MIR SINE MIR 106 232 -30 274 308 77 0 chr5 148965772 148965889 -50664261 + L2 LINE L2 3138 3263 -9 376 316 83 18 chr5 148965918 148966086 -50664064 - MER5A DNA MER1_type -3 186 8 977 251 96 28 chr5 148966129 148966452 -50663698 - MLT1A1 LTR MaLR -19 346 2 495 346 31 55 chr5 148969694 148969776 -50660374 + L1M3c LINE L1 174 256 -6047 2780 10 0 0 chr5 148969776 148970087 -50660063 + AluYb8 SINE Alu 1 311 -7 495 346 31 55 chr5 148970087 148970435 -50659715 + L1M3c LINE L1 256 1090 -5213 440 304 12 41 chr5 148970508 148970679 -50659471 + L1MB1 LINE L1 651 816 -5487 2596 250 81 35 chr5 148970830 148971705 -50658445 + L1MB1 LINE L1 777 1659 -4687 1743 133 37 13 chr5 148971705 148972005 -50658145 + AluSg SINE Alu 1 307 -3 2596 250 81 35 chr5 148972005 148972184 -50657966 + L1MB1 LINE L1 1659 1828 -4518 1406 160 24 8 chr5 148972209 148972459 -50657691 + AluJo SINE Alu 45 298 -14 1073 240 111 23 chr5 148972472 148972888 -50657262 + L1MB1 LINE L1 1867 2245 -4137 1601 182 92 53 chr5 148972888 148973267 -50656883 - MSTD LTR MaLR -2 394 1 1073 240 111 23 chr5 148973267 148973654 -50656496 + L1MB1 LINE L1 2245 2741 -3641 3980 190 41 24 chr5 148973660 148974274 -50655876 + L1MB1 LINE L1 5445 6083 -321 1937 152 0 0 chr5 148974274 148974577 -50655573 + AluSx SINE Alu 1 303 -9 3980 190 41 24 chr5 148974577 148974900 -50655250 + L1MB1 LINE L1 6083 6399 -5 866 299 86 25 chr5 148975687 148976048 -50654102 - L2 LINE L2 -6 3307 2925 270 330 21 0 chr5 148976081 148976175 -50653975 - L1M4 LINE L1 -606 5572 5477 229 342 43 43 chr5 148976321 148976508 -50653642 - MIR SINE MIR -56 206 20 207 0 0 0 chr5 148977109 148977132 -50653018 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 313 281 112 3 chr5 148977210 148977392 -50652758 + MIR SINE MIR 8 261 -1 419 287 18 7 chr5 148977750 148977888 -50652262 + MIR SINE MIR 57 196 -66 662 311 5 5 chr5 148978719 148978915 -50651235 - MIR SINE MIR -27 235 40 1753 165 131 99 chr5 148979067 148979571 -50650579 + MLT2B1 LTR ERVL 1 520 0 204 200 0 20 chr5 148980710 148980760 -50649390 - L2 LINE L2 0 3313 3265 516 298 91 35 chr5 148980967 148981169 -50648981 - MIR SINE MIR -12 250 38 219 365 27 0 chr5 148981343 148981417 -50648733 + MIR3 SINE MIR 109 184 -24 2514 154 34 5 chr5 148981559 148981969 -50648181 - MSTB LTR MaLR -4 422 1 326 50 0 0 chr5 148982837 148982877 -50647273 - U2 snRNA snRNA -147 41 2 355 252 187 14 chr5 148983118 148983257 -50646893 + MER5A DNA MER1_type 13 175 -14 190 308 116 20 chr5 148983377 148983523 -50646627 - L2 LINE L2 -534 2780 2621 641 283 94 18 chr5 148985049 148985325 -50644825 + L1ME1 LINE L1 5866 6162 -4 508 240 53 13 chr5 148985453 148985603 -50644547 + L1ME4a LINE L1 5961 6116 -5 453 229 0 57 chr5 148987085 148987207 -50642943 + L2 LINE L2 3153 3267 -5 360 336 57 29 chr5 148987968 148988108 -50642042 + MIR3 SINE MIR 2 145 -63 7429 23 6 0 chr5 148988134 148988991 -50641159 - L1PA4 LINE L1 0 6155 5294 920 294 117 36 chr5 148989283 148989803 -50640347 + MLT1K LTR MaLR 27 588 0 474 231 75 27 chr5 148990511 148990658 -50639492 + MIR SINE MIR 39 192 -70 2128 131 0 0 chr5 148990710 148991015 -50639135 + AluSx SINE Alu 1 305 -7 287 284 38 30 chr5 148991016 148991133 -50639017 - MIR SINE MIR -83 125 9 401 284 29 0 chr5 148991719 148991821 -50638329 - L2 LINE L2 0 3272 3168 280 222 0 14 chr5 148992047 148992119 -50638031 + MER103 DNA DNA 48 118 -48 1187 206 5 5 chr5 148994586 148994805 -50635345 + MER20 DNA MER1_type 1 219 0 264 295 82 25 chr5 148994813 148994935 -50635215 - MER5A DNA MER1_type 0 189 61 238 140 80 0 chr5 148995299 148995349 -50634801 - MIR3 SINE MIR -18 190 137 303 263 105 23 chr5 148995576 148995709 -50634441 - MER5A DNA MER1_type 0 189 46 270 314 103 14 chr5 148996046 148996226 -50633924 - MIR SINE MIR -65 143 2 1780 111 56 7 chr5 148997559 148997871 -50632279 + AluSx SINE Alu 1 325 0 442 232 184 0 chr5 148998042 148998167 -50631983 - MER5A DNA MER1_type -29 160 13 417 256 33 8 chr5 148998178 148998299 -50631851 + L2 LINE L2 3149 3272 0 2334 137 61 59 chr5 148999615 149000076 -50630074 - MLT1C LTR MaLR -4 463 2 240 220 101 28 chr5 149000318 149000427 -50629723 - L2 LINE L2 -1231 2083 1967 1205 213 47 56 chr5 149000432 149000751 -50629399 - MLT1H1 LTR MaLR 0 555 240 376 177 0 0 chr5 149000834 149000896 -50629254 - MER45 DNA AcHobo -15 1566 1505 243 170 0 0 chr5 149000907 149000954 -50629196 + (TG)n Simple_repeat Simple_repeat 2 48 0 196 337 99 0 chr5 149001379 149001480 -50628670 + MIR SINE MIR 68 178 -84 394 239 88 9 chr5 149002121 149002234 -50627916 + MIR SINE MIR 20 141 -121 185 271 0 12 chr5 149002730 149002815 -50627335 + GA-rich Low_complexity Low_complexity 3 86 0 1619 183 0 3 chr5 149003209 149003494 -50626656 + AluJo SINE Alu 1 284 -28 24 0 0 0 chr5 149003504 149003528 -50626622 + AT_rich Low_complexity Low_complexity 1 24 0 492 248 35 28 chr5 149004803 149004948 -50625202 + L2 LINE L2 3163 3308 -5 270 275 28 137 chr5 149004963 149005009 -50625141 + MIR SINE MIR 68 117 -145 1823 148 3 10 chr5 149005009 149005312 -50624838 - AluSg SINE Alu -9 301 1 270 275 28 137 chr5 149005312 149005328 -50624822 + MIR SINE MIR 117 133 -129 1725 151 15 4 chr5 149005328 149005600 -50624550 - AluJo SINE Alu -37 275 1 270 275 28 137 chr5 149005600 149005718 -50624432 + MIR SINE MIR 133 229 -33 1759 145 10 7 chr5 149006619 149006908 -50623242 + AluSx SINE Alu 1 290 -22 423 0 0 0 chr5 149006910 149006957 -50623193 + (TA)n Simple_repeat Simple_repeat 1 47 0 * 504 0 0 0 chr5 149006956 149007012 -50623138 + (GA)n Simple_repeat Simple_repeat 2 57 0 266 370 97 13 chr5 149007370 149007524 -50622626 - L2 LINE L2 -1 3271 3105 249 276 16 79 chr5 149007603 149007730 -50622420 - L2 LINE L2 -173 3099 2981 530 201 19 13 chr5 149008526 149008685 -50621465 + GA-rich Low_complexity Low_complexity 3 162 0 236 147 0 0 chr5 149008686 149008720 -50621430 + (AGGGGG)n Simple_repeat Simple_repeat 5 38 0 310 258 91 38 chr5 149009607 149009739 -50620411 - MIR SINE MIR 0 262 124 1968 164 22 30 chr5 149011058 149011424 -50618726 + MLT1A2 LTR MaLR 1 363 -11 524 261 37 22 chr5 149011454 149011588 -50618562 + L2 LINE L2 3137 3272 0 445 225 186 35 chr5 149011623 149011854 -50618296 + L1ME4a LINE L1 5814 6079 -42 2243 88 3 0 chr5 149012466 149012763 -50617387 - AluY SINE Alu -13 298 1 987 208 69 5 chr5 149012764 149012966 -50617184 - MER58A DNA MER1_type -9 215 1 402 258 264 18 chr5 149012966 149013133 -50617017 - MIR SINE MIR -24 238 31 247 358 73 0 chr5 149013193 149013302 -50616848 - L2 LINE L2 -2 3270 3154 402 281 128 24 chr5 149013596 149013760 -50616390 + MIR SINE MIR 1 181 -81 254 284 162 0 chr5 149013774 149013848 -50616302 + L2 LINE L2 3168 3253 -19 478 276 166 11 chr5 149014891 149015072 -50615078 + MIR SINE MIR 3 211 -51 189 256 256 11 chr5 149015108 149015198 -50614952 + L2 LINE L2 3137 3248 -24 506 312 131 14 chr5 149016461 149016682 -50613468 - MIR SINE MIR 0 262 16 275 320 111 23 chr5 149018482 149018654 -50611496 - L2 LINE L2 -156 3116 2930 1867 188 21 19 chr5 149019734 149020107 -50610043 - MLT1A2 LTR MaLR 0 374 1 573 350 77 4 chr5 149021311 149021545 -50608605 + MIR SINE MIR 9 259 -3 210 171 24 0 chr5 149021866 149021907 -50608243 + (ATG)n Simple_repeat Simple_repeat 2 43 0 368 249 177 48 chr5 149021918 149022032 -50608118 - MIR SINE MIR -19 243 145 1049 178 122 53 chr5 149022032 149022335 -50607815 - MER33 DNA MER1_type 0 324 1 368 249 177 48 chr5 149022335 149022429 -50607721 - MIR SINE MIR -117 145 8 1201 193 116 4 chr5 149023092 149023351 -50606799 + MSTD LTR MaLR 109 396 0 323 295 43 2 chr5 149023918 149024034 -50606116 + MIR SINE MIR 25 153 -69 * 398 178 168 9 chr5 149024032 149024139 -50606011 - L2 LINE L2 0 3313 3190 240 196 98 0 chr5 149024177 149024228 -50605922 + MIR SINE MIR 150 205 -57 374 285 120 70 chr5 149024858 149025058 -50605092 - MIR SINE MIR -51 211 2 1288 234 47 31 chr5 149025283 149025731 -50604419 + L1ME3 LINE L1 5706 6160 -2 364 257 9 9 chr5 149026919 149027024 -50603126 + L1ME4a LINE L1 5947 6051 -70 2264 82 13 0 chr5 149028078 149028381 -50601769 - AluSp SINE Alu -6 307 1 227 216 62 62 chr5 149028787 149028884 -50601266 + L1M3e LINE L1 751 847 -6183 1556 184 195 3 chr5 149030581 149030940 -50599210 - MSTA LTR MaLR 0 428 1 237 88 0 0 chr5 149030940 149030974 -50599176 - MSTA-int LTR MaLR 0 1580 1547 9348 133 34 36 chr5 149031024 149032569 -50597581 - MSTA-int LTR MaLR -35 1545 3 1951 133 177 11 chr5 149032571 149032938 -50597212 - MSTA LTR MaLR 0 428 1 529 268 44 88 chr5 149033186 149033436 -50596714 + MIR SINE MIR 12 250 -12 315 191 48 24 chr5 149034649 149034733 -50595417 - L1MC4 LINE L1 -1341 6981 1978 950 180 33 117 chr5 149034737 149035121 -50595029 - MLT1C LTR MaLR -81 386 7 227 290 40 30 chr5 149035139 149035239 -50594911 + MIR SINE MIR 161 261 -1 233 375 58 29 chr5 149035424 149035667 -50594483 + MIR SINE MIR 13 262 0 1076 184 34 0 chr5 149035969 149036148 -50594002 - MER58A DNA MER1_type 0 224 40 2781 217 62 16 chr5 149036148 149038027 -50592123 + L1MC1 LINE L1 4270 6333 0 223 232 71 0 chr5 149038117 149038173 -50591977 - MIR SINE MIR -115 93 34 3474 78 17 0 chr5 149041044 149041505 -50588645 - L1PA8 LINE L1 -17 6155 5687 685 262 114 0 chr5 149042658 149042868 -50587282 + MIR SINE MIR 17 250 -12 395 257 215 62 chr5 149043292 149043631 -50586519 + MLT1H LTR MaLR 5 395 -154 254 354 10 10 chr5 149043884 149043983 -50586167 + L2 LINE L2 3174 3272 0 280 219 84 34 chr5 149044022 149044141 -50586009 + L1ME4a LINE L1 5986 6110 -11 189 291 117 87 chr5 149044531 149044634 -50585516 - MIR SINE MIR -64 144 39 201 392 0 31 chr5 149044728 149044825 -50585325 + L2 LINE L2 3174 3267 -5 265 306 18 36 chr5 149045112 149045223 -50584927 - MIR SINE MIR -81 127 19 351 321 57 14 chr5 149046794 149046934 -50583216 - MIR SINE MIR -43 219 74 348 316 10 0 chr5 149047144 149047242 -50582908 - MIR SINE MIR -80 128 30 486 250 132 13 chr5 149047761 149047913 -50582237 + MIR SINE MIR 5 174 -88 238 213 21 0 chr5 149047949 149047996 -50582154 + L2 LINE L2 3007 3054 -218 238 373 0 0 chr5 149048001 149048076 -50582074 + L2 LINE L2 3195 3269 -3 360 0 0 0 chr5 149049501 149049541 -50580609 + (TTG)n Simple_repeat Simple_repeat 3 42 0 492 226 0 0 chr5 149049545 149049647 -50580503 - L1MA10 LINE L1 -12 6322 6221 28 71 0 0 chr5 149049869 149049925 -50580225 + AT_rich Low_complexity Low_complexity 1 56 0 561 233 79 106 chr5 149051454 149051587 -50578563 - MIR SINE MIR 0 262 134 1550 158 3 80 chr5 149051587 149051898 -50578252 + AluJo SINE Alu 5 291 -21 561 233 79 106 chr5 149051898 149051953 -50578197 - MIR SINE MIR -128 134 79 362 313 86 25 chr5 149053073 149053236 -50576914 - MIR3 SINE MIR -22 186 14 1051 248 100 60 chr5 149053497 149054229 -50575921 - L2 LINE L2 -7 3306 2561 557 264 47 115 chr5 149054276 149054557 -50575593 - MER102b DNA MER1_type -1089 339 87 2026 95 7 36 chr5 149054557 149054862 -50575288 - AluSg SINE Alu -14 296 1 557 264 47 115 chr5 149054862 149054944 -50575206 - MER102b DNA MER1_type -1341 87 1 339 333 0 0 chr5 149056748 149056853 -50573297 - MIR SINE MIR -20 242 138 601 272 44 0 chr5 149056873 149057031 -50573119 + MIR SINE MIR 48 212 -50 341 239 185 15 chr5 149057061 149057191 -50572959 - MIR SINE MIR -66 142 10 464 342 37 8 chr5 149057953 149058238 -50571912 + L2 LINE L2 2699 2997 -275 308 294 16 63 chr5 149058252 149058378 -50571772 + L2 LINE L2 3136 3255 -58 413 298 0 0 chr5 149058960 149059084 -50571066 + MIR SINE MIR 60 183 -79 500 206 215 96 chr5 149059581 149059790 -50570360 + MIR SINE MIR 3 236 -26 366 323 169 24 chr5 149061205 149061747 -50568403 - L2 LINE L2 -20 3252 2634 * 388 237 45 28 chr5 149061727 149061885 -50568265 + MIR SINE MIR 30 182 -62 232 287 138 0 chr5 149063204 149063291 -50566859 - MIR SINE MIR -38 224 126 1177 238 51 47 chr5 149066056 149066544 -50563606 + L1MEc LINE L1 1319 1808 -4588 1137 189 43 153 chr5 149066817 149067477 -50562673 - L1ME LINE L1 -567 5597 4993 180 77 0 0 chr5 149067478 149067504 -50562646 + (T)n Simple_repeat Simple_repeat 1 26 0 1070 194 40 82 chr5 149067519 149067896 -50562254 - L1ME2 LINE L1 -9 6155 5795 31955 41 6 0 chr5 149067949 149072588 -50557562 - L1PA4 LINE L1 0 6155 1493 6808 18 0 0 chr5 149072688 149073641 -50556509 - L1PA2 LINE L1 -138 6017 5065 389 280 36 88 chr5 149073752 149073945 -50556205 + MER5A DNA MER1_type 7 189 0 2199 65 7 36 chr5 149076088 149076395 -50553755 - AluY SINE Alu -13 298 1 487 203 78 20 chr5 149076507 149076660 -50553490 - L1ME4a LINE L1 -6 6115 5954 391 314 49 25 chr5 149076736 149076981 -50553169 - L1ME4a LINE L1 -343 5778 5528 279 269 92 23 chr5 149077092 149077222 -50552928 - L1ME4a LINE L1 -216 5905 5767 1979 128 3 10 chr5 149077467 149077757 -50552393 + AluSx SINE Alu 1 288 -24 22 0 0 0 chr5 149077867 149077889 -50552261 + AT_rich Low_complexity Low_complexity 1 22 0 457 280 112 29 chr5 149078024 149078217 -50551933 - L1ME4a LINE L1 -1311 4835 4659 186 43 0 0 chr5 149078217 149078240 -50551910 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 457 280 112 29 chr5 149078240 149078457 -50551693 - L1ME4a LINE L1 -1487 4659 4391 839 118 90 14 chr5 149078988 149079132 -50551018 - L1MB8 LINE L1 0 6178 6024 243 57 132 19 chr5 149079134 149079187 -50550963 - L1MB3 LINE L1 0 6183 6125 1924 185 21 32 chr5 149079191 149079707 -50550443 - L1MB2 LINE L1 -4 6287 5803 242 277 45 96 chr5 149079761 149079981 -50550169 - L2 LINE L2 -652 2662 2454 198 0 0 0 chr5 149080243 149080265 -50549885 + (CA)n Simple_repeat Simple_repeat 1 22 0 448 250 162 0 chr5 149080572 149080708 -50549442 + MIR SINE MIR 21 178 -84 346 306 18 9 chr5 149080825 149080936 -50549214 + MIR SINE MIR 30 141 -67 2344 257 67 55 chr5 149080938 149081942 -50548208 + HAL1 LINE L1 189 1204 -1303 21 36 0 0 chr5 149082300 149082328 -50547822 + AT_rich Low_complexity Low_complexity 1 28 0 194 222 309 12 chr5 149082953 149083034 -50547116 + MIR3 SINE MIR 98 202 -6 29732 59 5 2 chr5 149084085 149087804 -50542346 - L1P LINE L1 -2403 3743 13 952 159 9 79 chr5 149087818 149087981 -50542169 - L1M4 LINE L1 -1142 5004 4860 1685 201 0 3 chr5 149087981 149088280 -50541870 + AluJo SINE Alu 1 298 -14 952 159 9 79 chr5 149088280 149088343 -50541807 - L1M4 LINE L1 -1286 4860 4794 2240 177 88 40 chr5 149088344 149088869 -50541281 + L1ME1 LINE L1 5613 6162 -4 189 0 0 0 chr5 149089852 149089873 -50540277 + (A)n Simple_repeat Simple_repeat 1 21 0 239 303 156 9 chr5 149089942 149090051 -50540099 + MIR SINE MIR 48 172 -90 575 271 112 23 chr5 149090786 149091098 -50539052 + MLT1I LTR MaLR 1 302 -107 2410 83 0 0 chr5 149091516 149091816 -50538334 + AluY SINE Alu 1 300 -11 680 339 61 42 chr5 149092629 149093467 -50536683 + L2 LINE L2 2443 3296 -17 272 309 43 29 chr5 149093505 149093634 -50536516 - MIR SINE MIR -73 135 2 331 247 82 0 chr5 149094337 149094434 -50535716 - L2 LINE L2 -18 3295 3191 317 301 155 48 chr5 149094788 149095143 -50535007 + MLT1L LTR MaLR 205 597 -18 571 306 9 41 chr5 149095170 149095356 -50534794 + MIR SINE MIR 15 195 -67 2987 137 20 11 chr5 149095356 149095809 -50534341 + MSTB2 LTR MaLR 1 457 0 571 306 9 41 chr5 149095809 149095841 -50534309 + MIR SINE MIR 195 226 -36 782 102 30 78 chr5 149095848 149096022 -50534128 + L1M3 LINE L1 5345 5514 -641 425 195 115 9 chr5 149096803 149096916 -50533234 + L2 LINE L2 3134 3258 -14 192 97 0 0 chr5 149096916 149096947 -50533203 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 1028 316 139 25 chr5 149097297 149098145 -50532005 + L2 LINE L2 1736 2486 -827 3804 92 19 0 chr5 149098145 149098666 -50531484 - L1MA2 LINE L1 -4 6300 5770 1028 316 139 25 chr5 149098666 149099222 -50530928 + L2 LINE L2 2486 3312 -1 209 285 79 55 chr5 149099219 149099384 -50530766 - L3b LINE CR1 -139 1444 1276 * 317 315 121 42 chr5 149099972 149100641 -50529509 + L2 LINE L2 2243 2964 -350 288 262 71 64 chr5 149100736 149100877 -50529273 + L2 LINE L2 3172 3313 0 441 0 0 0 chr5 149101254 149101303 -50528847 + (CA)n Simple_repeat Simple_repeat 2 50 0 347 311 67 44 chr5 149101534 149101714 -50528436 - MIR SINE MIR -19 243 60 204 40 0 0 chr5 149102576 149102601 -50527549 + (TTA)n Simple_repeat Simple_repeat 2 26 0 4769 143 38 26 chr5 149102601 149103419 -50526731 - L1MB1 LINE L1 -7 6161 5334 2589 151 38 14 chr5 149103419 149103835 -50526315 + L1PB4 LINE L1 5710 6144 -12 202 226 106 23 chr5 149103854 149103946 -50526204 - MIR3 SINE MIR -51 157 108 522 297 40 6 chr5 149104451 149104626 -50525524 + MIR SINE MIR 74 254 -8 186 258 290 24 chr5 149104671 149104795 -50525355 + MIR3 SINE MIR 1 157 -51 1814 126 83 4 chr5 149104929 149105206 -50524944 + AluSx SINE Alu 14 312 0 255 160 53 0 chr5 149105217 149105286 -50524864 + L1ME4a LINE L1 5304 5375 -795 853 289 76 25 chr5 149105299 149105734 -50524416 + L1ME4a LINE L1 5419 5884 -237 705 229 139 31 chr5 149105754 149106012 -50524138 - LTR16A1 LTR ERVL -15 442 157 956 325 51 14 chr5 149106023 149106624 -50523526 - ERVL LTR ERVL -945 4819 4145 1076 215 30 92 chr5 149106630 149106928 -50523222 + L1MC4a LINE L1 6609 6845 -963 3228 158 29 9 chr5 149106928 149107484 -50522666 + L1MC1 LINE L1 5764 6330 -3 1076 215 30 92 chr5 149107484 149107554 -50522596 + L1MC4a LINE L1 6845 6918 -890 3320 199 90 3 chr5 149107844 149108617 -50521533 + L1MC4a LINE L1 6993 7992 0 881 307 62 7 chr5 149109214 149109504 -50520646 + MLT1K LTR MaLR 15 320 -268 575 294 35 25 chr5 149110039 149110272 -50519878 + MIR SINE MIR 21 254 -8 250 325 37 48 chr5 149110997 149111268 -50518882 + L2 LINE L2 2036 2303 -1011 383 174 0 14 chr5 149111637 149111706 -50518444 + MER94 DNA DNA 27 94 -40 287 305 0 0 chr5 149113682 149113777 -50516373 + MIR3 SINE MIR 102 196 -12 2622 151 25 10 chr5 149114336 149114820 -50515330 - L1MB2 LINE L1 0 6171 5681 25 0 0 50 chr5 149115640 149115657 -50514493 + AT_rich Low_complexity Low_complexity 1 17 -21 2227 117 0 0 chr5 149115657 149115948 -50514202 + AluSq SINE Alu 1 291 -22 25 0 0 50 chr5 149115948 149115970 -50514180 + AT_rich Low_complexity Low_complexity 17 38 0 259 132 0 0 chr5 149117231 149117269 -50512881 + MIR SINE MIR 109 146 -62 1651 169 79 3 chr5 149117297 149117418 -50512732 + AluJo SINE Alu 1 111 -260 189 0 0 0 chr5 149117418 149117439 -50512711 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1651 169 79 3 chr5 149117439 149117666 -50512484 + AluJo SINE Alu 111 371 0 867 175 106 0 chr5 149118187 149118347 -50511803 + MER45A DNA AcHobo 1 177 -1 1112 169 67 22 chr5 149119596 149119821 -50510329 - MER46A DNA MER2_type -1 235 1 182 294 20 0 chr5 149120466 149120517 -50509633 + L2 LINE L2 3122 3173 -99 212 274 0 55 chr5 149122941 149123014 -50507136 - MIR SINE MIR -58 150 82 1707 158 32 28 chr5 149123442 149123726 -50506424 + AluJo SINE Alu 3 287 -25 184 213 33 0 chr5 149123727 149123788 -50506362 + GA-rich Low_complexity Low_complexity 1 63 0 215 324 88 0 chr5 149124263 149124365 -50505785 - L2 LINE L2 0 3313 3203 245 345 43 17 chr5 149125333 149125449 -50504701 - L2 LINE L2 -2 3270 3152 239 131 0 98 chr5 149126052 149126113 -50504037 + L1ME4a LINE L1 6067 6121 0 616 266 118 33 chr5 149128387 149128896 -50501254 + L2 LINE L2 2758 3312 -1 194 348 106 12 chr5 149129444 149129605 -50500545 - MIR SINE MIR -50 212 37 728 266 77 17 chr5 149130042 149130275 -50499875 + MIR SINE MIR 15 261 -1 328 349 6 24 chr5 149130514 149130680 -50499470 - L2 LINE L2 -458 2856 2694 1091 54 134 0 chr5 149130729 149130878 -50499272 + L1M1 LINE L1 5632 5800 -504 1087 148 5 58 chr5 149130990 149131046 -50499104 + L1MA2 LINE L1 6094 6151 -153 2020 157 3 0 chr5 149131046 149131351 -50498799 + AluSg SINE Alu 1 306 -4 1087 148 5 58 chr5 149131351 149131394 -50498756 + L1MA2 LINE L1 6151 6195 -109 1744 166 3 14 chr5 149131394 149131706 -50498444 + AluJb SINE Alu 1 309 0 1087 148 5 58 chr5 149131706 149131827 -50498323 + L1MA2 LINE L1 6195 6304 0 22 0 0 0 chr5 149131827 149131849 -50498301 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr5 149131961 149131982 -50498168 + (GGGTG)n Simple_repeat Simple_repeat 5 25 0 451 356 38 26 chr5 149132002 149132426 -50497724 - L2 LINE L2 -871 2443 2015 479 285 40 0 chr5 149133956 149134107 -50496043 + MIR SINE MIR 87 243 -19 1825 240 32 66 chr5 149134149 149134732 -50495418 - MLT1E LTR MaLR 0 593 1 424 298 91 47 chr5 149134776 149135162 -50494988 - L2 LINE L2 -1 3312 2910 420 210 89 16 chr5 149136870 149136994 -50493156 + MER103 DNA DNA 3 135 -31 500 271 20 86 chr5 149138215 149138459 -50491691 + MIR SINE MIR 35 262 0 212 136 45 0 chr5 149138668 149138712 -50491438 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 378 239 33 11 chr5 149138745 149138837 -50491313 + MIR SINE MIR 121 214 -48 1178 290 45 15 chr5 149139751 149140151 -50489999 + L1MC4a LINE L1 5415 5826 -1982 * 4245 256 109 59 chr5 149140130 149141196 -50488954 + L1MC4a LINE L1 5276 6288 -1520 2286 141 48 10 chr5 149141196 149141592 -50488558 + L1PB1 LINE L1 5741 6151 0 4245 256 109 59 chr5 149141592 149142647 -50487503 + L1MC4a LINE L1 6288 7502 -306 1692 157 36 4 chr5 149142926 149143231 -50486919 - AluJo SINE Alu 0 314 1 1243 106 28 0 chr5 149143475 149143654 -50486496 - L1PA13 LINE L1 0 6163 5980 2046 147 0 0 chr5 149144081 149144373 -50485777 + AluSx SINE Alu 1 292 -20 516 246 134 46 chr5 149144399 149144704 -50485446 + L1ME4a LINE L1 5621 5952 -169 228 360 79 7 chr5 149145384 149145523 -50484627 + MIR SINE MIR 2 150 -112 213 250 19 0 chr5 149145654 149145706 -50484444 + MIR SINE MIR 210 262 0 692 278 91 45 chr5 149146920 149147272 -50482878 + MLT1I LTR MaLR 40 407 -2 405 0 0 0 chr5 149147738 149147783 -50482367 + (CA)n Simple_repeat Simple_repeat 1 45 0 216 158 0 0 chr5 149148322 149148360 -50481790 + GA-rich Low_complexity Low_complexity 2 39 0 2217 125 10 0 chr5 149150488 149150792 -50479358 + AluSq SINE Alu 1 307 -6 496 105 12 12 chr5 149150872 149150958 -50479192 + L2 LINE L2 3191 3276 -37 929 161 98 29 chr5 149151053 149151258 -50478892 - MER20 DNA MER1_type 0 219 1 426 300 56 28 chr5 149152103 149152390 -50477760 + L1ME4a LINE L1 5621 5915 -206 1493 220 170 29 chr5 149152831 149153391 -50476759 + L1ME3A LINE L1 5523 6161 -9 322 290 10 10 chr5 149153874 149153974 -50476176 + L2 LINE L2 3209 3308 -5 189 0 0 0 chr5 149154719 149154740 -50475410 + (A)n Simple_repeat Simple_repeat 1 21 0 286 299 18 102 chr5 149155431 149155480 -50474670 + MER5A DNA MER1_type 7 59 -130 2289 105 0 3 chr5 149155480 149155776 -50474374 + AluSx SINE Alu 1 295 -17 286 299 18 102 chr5 149155776 149155893 -50474257 + MER5A DNA MER1_type 59 159 -30 358 299 101 96 chr5 149157160 149157515 -50472635 + L2 LINE L2 2903 3259 -13 317 256 0 13 chr5 149159349 149159427 -50470723 - MIR SINE MIR -29 233 157 418 330 27 36 chr5 149159707 149159928 -50470222 + MLT1K LTR MaLR 354 572 -16 260 246 31 0 chr5 149160286 149160351 -50469799 + HsTC2 DNA Tc2 1831 1897 -1 618 272 199 0 chr5 149161715 149161921 -50468229 + MIR SINE MIR 14 260 -2 260 259 172 43 chr5 149162037 149162153 -50467997 + L2 LINE L2 3182 3312 -1 400 344 6 13 chr5 149163468 149163625 -50466525 + MER5A DNA MER1_type 34 189 0 243 0 0 0 chr5 149165185 149165212 -50464938 + (CA)n Simple_repeat Simple_repeat 2 28 0 315 0 0 0 chr5 149165612 149165647 -50464503 + (CA)n Simple_repeat Simple_repeat 1 35 0 7540 43 0 0 chr5 149216790 149218090 -50412060 + L1PA5 LINE L1 4854 6153 -1 6412 159 31 6 chr5 149218090 149219403 -50410747 + L1MC1 LINE L1 4985 6328 -5 307 254 0 0 chr5 149219406 149219469 -50410681 - MER81 DNA DNA -51 63 1 304 196 196 75 chr5 149220300 149220433 -50409717 - MER5A DNA MER1_type -6 183 35 1164 213 92 75 chr5 149220574 149221029 -50409121 + L2 LINE L2 2198 2660 -654 707 232 79 44 chr5 149221038 149221341 -50408809 + MLT1D LTR MaLR 15 334 -133 1261 177 45 103 chr5 149221342 149221732 -50408418 + MLT2D LTR ERVL 1 368 -41 246 105 0 0 chr5 149221732 149221770 -50408380 + (TG)n Simple_repeat Simple_repeat 2 39 0 1797 144 99 3 chr5 149221806 149222118 -50408032 - MER47A DNA MER2_type -23 343 2 400 62 0 0 chr5 149222150 149222198 -50407952 + MLT2D LTR ERVL 367 414 0 * 606 204 36 15 chr5 149222198 149222332 -50407818 + MLT1D LTR MaLR 331 467 0 883 246 107 12 chr5 149222335 149222683 -50407467 + L2 LINE L2 2659 3038 -275 266 200 40 27 chr5 149222709 149222784 -50407366 - MLT1D LTR MaLR -414 91 16 394 273 28 0 chr5 149222819 149222962 -50407188 - L2 LINE L2 -792 2522 2376 219 219 0 47 chr5 149222982 149223046 -50407104 - L2 LINE L2 -257 3056 2996 553 286 0 48 chr5 149223088 149223294 -50406856 + L2 LINE L2 3101 3296 -17 288 0 0 0 chr5 149223294 149223326 -50406824 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 40536 58 3 55 chr5 149223382 149225263 -50404887 + L1PA5 LINE L1 1 1977 -4177 6816 65 16 54 chr5 149225263 149226547 -50403603 - SVA Other Other -551 1381 433 40536 58 3 55 chr5 149226547 149226564 -50403586 + L1PA5 LINE L1 1977 1993 -4161 6218 51 1 101 chr5 149226564 149227526 -50402624 - SVA Other Other -520 866 1 40536 58 3 55 chr5 149227526 149231817 -50398333 + L1PA5 LINE L1 1993 6147 -7 830 223 69 6 chr5 149232374 149232549 -50397601 - MER58A DNA MER1_type -2 222 37 688 313 114 22 chr5 149232574 149233197 -50396953 - L3 LINE CR1 -272 1305 626 263 233 41 0 chr5 149235689 149235762 -50394388 - MIR SINE MIR -3 259 184 1775 94 109 0 chr5 149236293 149236559 -50393591 - L1PB1 LINE L1 0 6151 5857 11352 83 6 9 chr5 149236559 149237653 -50392497 + L1PA7 LINE L1 2502 3598 -2556 7506 41 1 1 chr5 149237653 149238930 -50391220 + L1PA5 LINE L1 4878 6154 0 11352 83 6 9 chr5 149238930 149241397 -50388753 + L1PA7 LINE L1 3598 6154 0 4313 118 14 9 chr5 149241403 149242176 -50387974 - L1PB1 LINE L1 -278 5873 5100 5954 182 7 11 chr5 149242185 149243367 -50386783 + L1PB1 LINE L1 3917 5093 -1053 247 224 40 40 chr5 149243866 149243942 -50386208 + L1P5 LINE L1 5485 5560 -591 565 203 44 32 chr5 149243976 149243993 -50386157 - L1MA10 LINE L1 0 6334 6318 2439 219 53 24 chr5 149243993 149244614 -50385536 - L1ME1 LINE L1 -5 6161 5523 21 0 0 0 chr5 149244728 149244749 -50385401 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 149244894 149244924 -50385226 + AT_rich Low_complexity Low_complexity 1 30 0 1779 78 22 4 chr5 149245087 149245317 -50384833 - AluSg1 SINE Alu -16 293 60 2152 134 0 0 chr5 149245337 149245629 -50384521 - AluSx SINE Alu -14 298 7 2449 60 0 53 chr5 149245639 149245958 -50384192 - AluY SINE Alu -9 302 1 1964 100 11 0 chr5 149246563 149246844 -50383306 + L1MA2 LINE L1 6021 6304 0 25 31 0 0 chr5 149246844 149246876 -50383274 + AT_rich Low_complexity Low_complexity 1 32 0 347 145 14 0 chr5 149247475 149247544 -50382606 + GA-rich Low_complexity Low_complexity 1 70 0 2390 102 0 0 chr5 149247973 149248276 -50381874 + AluSx SINE Alu 5 307 -5 1857 164 35 38 chr5 149248913 149249279 -50380871 - MLT1A1 LTR MaLR 0 365 1 255 276 69 0 chr5 149249436 149249523 -50380627 - MIR SINE MIR -52 210 118 225 0 0 0 chr5 149249829 149249854 -50380296 + (GA)n Simple_repeat Simple_repeat 1 25 0 207 365 0 0 chr5 149250321 149250384 -50379766 - L2 LINE L2 -93 3179 3117 529 227 95 89 chr5 149250402 149250750 -50379400 + L1ME4a LINE L1 5742 6091 -30 2316 120 0 0 chr5 149251092 149251400 -50378750 - AluSg SINE Alu -2 308 1 246 338 23 60 chr5 149251571 149251704 -50378446 - L2 LINE L2 0 3272 3145 615 284 78 5 chr5 149251724 149251942 -50378208 + MIR SINE MIR 29 262 0 361 288 175 45 chr5 149253247 149253301 -50376849 + L2 LINE L2 2841 2887 -385 2235 103 7 7 chr5 149253301 149253593 -50376557 - AluSx SINE Alu -20 292 1 361 288 175 45 chr5 149253593 149253916 -50376234 + L2 LINE L2 2887 3267 -5 202 222 78 67 chr5 149254746 149254836 -50375314 + L2 LINE L2 3160 3250 -63 248 238 79 0 chr5 149255020 149255083 -50375067 - MER103 DNA DNA -96 70 3 215 239 33 43 chr5 149255561 149255653 -50374497 - MIR SINE MIR -108 154 64 355 280 112 8 chr5 149255846 149255971 -50374179 + Charlie8 DNA MER1_type 1 138 -2279 2495 73 7 0 chr5 149257089 149257390 -50372760 - AluSc SINE Alu -6 303 1 2160 137 35 30 chr5 149258145 149258518 -50371632 - THE1C LTR MaLR 0 375 1 697 215 129 114 chr5 149258706 149258957 -50371193 - L2 LINE L2 -3 3310 3047 1395 189 78 22 chr5 149258957 149259227 -50370923 + AluJo SINE Alu 1 285 -27 697 215 129 114 chr5 149259227 149259440 -50370710 - L2 LINE L2 -266 3047 2839 2200 112 0 7 chr5 149260040 149260384 -50369766 + AluSx SINE Alu 1 342 0 572 281 78 18 chr5 149260727 149260944 -50369206 + MER112 DNA MER1_type 21 250 -10 380 202 69 128 chr5 149261065 149261253 -50368897 - MER5B DNA MER1_type 0 178 2 359 207 0 27 chr5 149261317 149261428 -50368722 + (CA)n Simple_repeat Simple_repeat 2 109 0 222 333 144 9 chr5 149261520 149261631 -50368519 + L2 LINE L2 3136 3261 -11 417 268 120 21 chr5 149261636 149261778 -50368372 - MIR SINE MIR -92 170 15 336 264 85 78 chr5 149264310 149264439 -50365711 - L2 LINE L2 -4 3268 3139 2734 99 3 0 chr5 149264834 149265197 -50364953 - THE1B LTR MaLR 0 364 1 378 357 32 0 chr5 149265796 149265950 -50364200 + Tigger8 DNA MER2_type 46 204 -462 290 179 54 0 chr5 149266094 149266150 -50364000 + Tigger8 DNA MER2_type 405 463 -203 276 206 50 135 chr5 149266162 149266223 -50363927 + HAL1 LINE L1 24 68 -2439 2346 67 0 3 chr5 149266223 149266521 -50363629 - AluY SINE Alu -14 297 1 276 206 50 135 chr5 149266521 149266600 -50363550 + HAL1 LINE L1 68 152 -2355 232 364 40 10 chr5 149266687 149266786 -50363364 + Tigger8 DNA MER2_type 551 652 -14 415 318 166 31 chr5 149267872 149268319 -50361831 - L2 LINE L2 0 3313 2807 2362 93 0 0 chr5 149268907 149269219 -50360931 + AluSx SINE Alu 1 312 0 2095 122 10 0 chr5 149270129 149270433 -50359717 - AluSx SINE Alu -5 307 1 472 310 65 61 chr5 149270451 149270926 -50359224 + L2 LINE L2 2690 3169 -103 352 255 90 19 chr5 149271000 149271129 -50359021 - MIR3 SINE MIR -53 155 23 218 82 20 41 chr5 149273123 149273172 -50356978 + (TA)n Simple_repeat Simple_repeat 2 49 0 323 172 43 75 chr5 149273179 149273272 -50356878 - L1MC4 LINE L1 -1339 6703 6614 213 39 0 0 chr5 149273691 149273717 -50356433 + (CTA)n Simple_repeat Simple_repeat 1 26 0 502 269 151 5 chr5 149273718 149273904 -50356246 - MIR SINE MIR -2 260 48 334 294 41 22 chr5 149274041 149274176 -50355974 + MIR3 SINE MIR 66 202 -6 535 263 74 11 chr5 149274255 149274430 -50355720 - MER117 DNA MER1_type -9 188 3 273 200 0 0 chr5 149274439 149274494 -50355656 - MIR SINE MIR -55 153 99 * 848 330 139 28 chr5 149274491 149274973 -50355177 - L2 LINE L2 -8 3264 2837 2356 212 70 4 chr5 149274973 149275491 -50354659 + MLT1H1 LTR MaLR 2 553 -2 848 330 139 28 chr5 149275491 149276020 -50354130 - L2 LINE L2 -435 2837 2148 562 345 61 9 chr5 149276684 149276913 -50353237 + MIR SINE MIR 20 260 -2 796 288 141 18 chr5 149277366 149278030 -50352120 - L2 LINE L2 -10 3303 2550 6268 202 38 16 chr5 149278705 149280005 -50350145 + L1MB8 LINE L1 3829 5195 -983 1968 142 0 0 chr5 149280005 149280300 -50349850 + AluJb SINE Alu 1 295 -17 6268 202 38 16 chr5 149280300 149281307 -50348843 + L1MB8 LINE L1 5195 6178 0 437 257 101 42 chr5 149281310 149281665 -50348485 + L1MEd LINE L1 1083 1497 -4813 329 330 46 46 chr5 149281790 149281987 -50348163 + MIR SINE MIR 20 216 -46 423 256 24 0 chr5 149281993 149282118 -50348032 + L1MC4a LINE L1 5815 5942 -1866 186 163 0 82 chr5 149282732 149282781 -50347369 - L3 LINE CR1 -850 727 683 210 301 14 14 chr5 149283394 149283467 -50346683 + GA-rich Low_complexity Low_complexity 2 74 0 269 277 88 20 chr5 149284480 149284590 -50345560 - MIR SINE MIR -84 124 6 696 268 24 24 chr5 149284594 149284799 -50345351 + MIR SINE MIR 58 262 0 197 359 66 50 chr5 149285892 149286090 -50344060 - MIR SINE MIR -58 204 4 1084 144 0 0 chr5 149286103 149286293 -50343857 + AluSg/x SINE Alu 125 314 0 312 285 211 0 chr5 149286403 149286526 -50343624 - MIR SINE MIR -19 243 95 352 308 0 0 chr5 149286527 149286618 -50343532 + MIR3 SINE MIR 115 205 -3 840 290 9 5 chr5 149287125 149287349 -50342801 - MIR SINE MIR -25 237 13 468 284 197 38 chr5 149287736 149288425 -50341725 - L2 LINE L2 0 3313 2530 204 125 0 0 chr5 149288871 149288903 -50341247 + (T)n Simple_repeat Simple_repeat 1 32 0 1044 121 72 68 chr5 149288904 149289111 -50341039 - L1PA16 LINE L1 -1 6165 5958 1446 141 0 0 chr5 149289114 149289327 -50340823 + L1PA16 LINE L1 5726 5938 -228 295 264 246 18 chr5 149289714 149289824 -50340326 - MIR3 SINE MIR -72 136 2 306 263 294 0 chr5 149290255 149290415 -50339735 + MIR SINE MIR 2 208 -54 392 267 9 9 chr5 149290616 149290721 -50339429 - MIR SINE MIR -58 150 46 623 341 31 4 chr5 149293736 149293962 -50336188 + MIR SINE MIR 29 260 -2 298 209 187 45 chr5 149294430 149294564 -50335586 + MER117 DNA MER1_type 8 160 -37 694 139 0 0 chr5 149294839 149294940 -50335210 - AluSg/x SINE Alu -16 296 196 710 213 0 19 chr5 149295118 149295278 -50334872 - L1M4 LINE L1 -3278 2868 2712 1005 264 108 30 chr5 149295289 149295752 -50334398 + MLT1H LTR MaLR 1 547 -2 545 235 159 6 chr5 149296708 149296878 -50333272 - MIR SINE MIR -59 203 8 399 279 36 9 chr5 149297505 149297616 -50332534 + MIR SINE MIR 77 190 -72 341 235 20 20 chr5 149297671 149297769 -50332381 + LTR16A1 LTR ERVL 51 148 -309 4811 151 36 17 chr5 149297827 149298883 -50331267 - L1MB7 LINE L1 -16 6168 5099 788 242 88 9 chr5 149298899 149299126 -50331024 + LTR16A LTR ERVL 200 444 -6 668 330 44 29 chr5 149299173 149299657 -50330493 + L2 LINE L2 2782 3270 -2 415 228 22 0 chr5 149300381 149300473 -50329677 - MIR SINE MIR -168 94 1 540 235 101 28 chr5 149301632 149301811 -50328339 + MLT1J LTR MaLR 318 509 -2 260 190 19 44 chr5 149301842 149301914 -50328236 + MIR SINE MIR 103 181 -27 211 288 108 18 chr5 149302635 149302746 -50327404 - MIR3 SINE MIR -51 157 37 249 250 0 0 chr5 149302797 149302865 -50327285 + CT-rich Low_complexity Low_complexity 2 69 0 215 286 16 49 chr5 149302834 149303019 -50327131 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 * 202 340 97 10 chr5 149303139 149303242 -50326908 + L2 LINE L2 3200 3311 -2 205 167 0 0 chr5 149303327 149303363 -50326787 + GA-rich Low_complexity Low_complexity 5 40 0 241 258 129 0 chr5 149303628 149303690 -50326460 - MIR SINE MIR -58 150 81 325 268 93 10 chr5 149304776 149304873 -50325277 + MIR SINE MIR 157 261 -1 186 43 0 0 chr5 149306729 149306752 -50323398 + (TAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr5 149307288 149307310 -50322840 + AT_rich Low_complexity Low_complexity 1 22 0 477 218 30 0 chr5 149309440 149309541 -50320609 + MER94 DNA DNA 2 105 -29 217 49 0 49 chr5 149309617 149309658 -50320492 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 234 0 0 0 chr5 149310179 149310205 -50319945 + (CA)n Simple_repeat Simple_repeat 2 27 0 365 265 10 39 chr5 149310963 149311065 -50319085 + MIR SINE MIR 34 132 -76 295 186 12 58 chr5 149311312 149311398 -50318752 + MLT1J LTR MaLR 111 192 -319 252 319 124 11 chr5 149311446 149311631 -50318519 + MLT1J LTR MaLR 306 511 0 355 256 128 0 chr5 149311945 149312070 -50318080 - L1ME4a LINE L1 -2 6119 5979 692 280 43 22 chr5 149312080 149312312 -50317838 - MIR SINE MIR 0 262 26 392 281 74 0 chr5 149312464 149312599 -50317551 - L1ME4a LINE L1 -326 5795 5651 236 322 56 0 chr5 149313032 149313122 -50317028 + MIR SINE MIR 134 228 -34 563 265 91 48 chr5 149313368 149313598 -50316552 + MIR SINE MIR 20 259 -3 272 287 34 91 chr5 149313821 149314030 -50316120 + MER117 DNA MER1_type 1 197 0 1975 128 24 0 chr5 149315122 149315411 -50314739 + AluJb SINE Alu 1 296 -16 398 256 39 50 chr5 149315411 149315591 -50314559 + L1ME4a LINE L1 5631 5808 -313 364 312 18 3 chr5 149316884 149317019 -50313131 + MIR SINE MIR 32 165 -67 426 94 0 0 chr5 149317103 149317167 -50312983 + (CATA)n Simple_repeat Simple_repeat 2 65 0 296 246 131 0 chr5 149317201 149317323 -50312827 + L1ME4a LINE L1 5966 6103 -18 480 245 112 14 chr5 149317608 149317751 -50312399 + MIR3 SINE MIR 4 160 -48 201 295 173 36 chr5 149317793 149317932 -50312218 + MER5B DNA MER1_type 18 175 -3 195 356 148 0 chr5 149317945 149318046 -50312104 + L2 LINE L2 3151 3266 -6 21 0 0 0 chr5 149318047 149318068 -50312082 + AT_rich Low_complexity Low_complexity 1 21 0 442 299 9 83 chr5 149319038 149319255 -50310895 - MIR3 SINE MIR -7 201 1 186 71 0 0 chr5 149319454 149319482 -50310668 + (A)n Simple_repeat Simple_repeat 1 28 0 657 227 23 29 chr5 149319994 149320166 -50309984 + MIR SINE MIR 74 244 -18 5063 175 19 12 chr5 149320380 149321390 -50308760 + L1PB4 LINE L1 4470 5498 -658 2485 70 3 13 chr5 149321390 149321704 -50308446 + AluY SINE Alu 1 311 0 5063 175 19 12 chr5 149321704 149322368 -50307782 + L1PB4 LINE L1 5498 6156 0 282 280 13 0 chr5 149324928 149325003 -50305147 + MIR SINE MIR 3 78 -184 304 248 94 34 chr5 149325468 149325585 -50304565 + MIR SINE MIR 60 183 -79 421 249 159 65 chr5 149326167 149326368 -50303782 + MLT1J LTR MaLR 99 318 -193 257 305 86 20 chr5 149326378 149326529 -50303621 + MLT1L LTR MaLR 447 607 -8 190 377 38 0 chr5 149326941 149327047 -50303103 + MIR3 SINE MIR 74 183 -25 2157 130 3 13 chr5 149327803 149328118 -50302032 + AluSx SINE Alu 1 312 0 451 223 96 6 chr5 149328954 149329111 -50301039 - MIR SINE MIR -61 201 31 427 239 13 53 chr5 149329178 149329402 -50300748 - MER112 DNA MER1_type -4 256 1 23 0 0 0 chr5 149329468 149329491 -50300659 + AT_rich Low_complexity Low_complexity 1 23 0 1211 158 16 0 chr5 149329669 149329853 -50300297 - MER5A DNA MER1_type 0 189 3 659 303 86 42 chr5 149330638 149330998 -50299152 + L2 LINE L2 2897 3272 0 2078 133 0 13 chr5 149331460 149331762 -50298388 + AluJb SINE Alu 1 298 -14 4735 118 29 0 chr5 149331982 149332457 -50297693 - L1MA6 LINE L1 0 6300 5797 2191 116 0 10 chr5 149332457 149332760 -50297390 - AluSx SINE Alu -12 300 1 4735 118 29 0 chr5 149332760 149332971 -50297179 - L1MA6 LINE L1 -503 5797 5594 8690 136 23 4 chr5 149332971 149334423 -50295727 + L1M2 LINE L1 3405 4883 -1263 1863 144 9 12 chr5 149334435 149334754 -50295396 + L1M2 LINE L1 5254 5571 -729 196 302 58 23 chr5 149334992 149335078 -50295072 - MIR3 SINE MIR -10 198 110 23 0 0 0 chr5 149335602 149335625 -50294525 + AT_rich Low_complexity Low_complexity 1 23 0 647 273 88 31 chr5 149336206 149336433 -50293717 + MIR SINE MIR 13 252 -10 587 312 127 0 chr5 149337461 149337542 -50292608 + MIR SINE MIR 2 71 -191 2197 178 135 33 chr5 149337542 149338053 -50292097 + MLT1F1 LTR MaLR 5 567 0 587 312 127 0 chr5 149338053 149338192 -50291958 + MIR SINE MIR 71 250 -12 410 300 25 25 chr5 149338222 149338342 -50291808 + MIR SINE MIR 3 122 -140 358 332 52 52 chr5 149338643 149338911 -50291239 + L2 LINE L2 3005 3272 0 2323 90 0 7 chr5 149338927 149339228 -50290922 + AluSq SINE Alu 1 299 -14 212 57 0 29 chr5 149339277 149339312 -50290838 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 5108 172 32 31 chr5 149339789 149340617 -50289533 + L1ME1 LINE L1 4320 5145 -1021 4814 135 12 1 chr5 149340617 149341341 -50288809 + L1MA8 LINE L1 5556 6287 -4 2408 60 0 27 chr5 149341350 149341649 -50288501 + AluY SINE Alu 1 291 -20 5108 172 32 31 chr5 149341649 149342649 -50287501 + L1ME1 LINE L1 5152 6155 -11 422 221 195 7 chr5 149342732 149342886 -50287264 + MIR SINE MIR 20 202 -60 708 265 35 61 chr5 149343673 149344091 -50286059 + L1ME2 LINE L1 4877 5285 -902 1778 176 3 25 chr5 149344091 149344410 -50285740 + AluJb SINE Alu 1 312 0 708 265 35 61 chr5 149344410 149344552 -50285598 + L1ME2 LINE L1 5285 5429 -758 651 265 37 11 chr5 149345184 149345373 -50284777 + MIR SINE MIR 2 195 -67 274 286 36 12 chr5 149345790 149345874 -50284276 - MIR3 SINE MIR -27 181 96 482 120 0 74 chr5 149346883 149346991 -50283159 + MIR SINE MIR 101 200 -62 332 293 57 41 chr5 149347538 149347661 -50282489 - L2 LINE L2 -5 3267 3143 737 192 17 17 chr5 149348078 149348250 -50281900 + L1MB4 LINE L1 6002 6173 -7 404 253 82 57 chr5 149349157 149349315 -50280835 - MIR SINE MIR -41 221 60 388 306 75 21 chr5 149349544 149349730 -50280420 + MIR SINE MIR 7 202 -60 552 313 79 18 chr5 149349917 149350144 -50280006 - MIR SINE MIR -4 258 18 413 18 0 18 chr5 149350618 149350673 -50279477 + (CA)n Simple_repeat Simple_repeat 1 54 0 448 275 78 37 chr5 149351187 149351405 -50278745 + L1ME2 LINE L1 5567 5793 -2015 845 177 9 82 chr5 149351411 149351441 -50278709 + MER2 DNA MER2_type 1 32 -313 2258 103 23 0 chr5 149351441 149351743 -50278407 - AluSx SINE Alu -3 309 1 845 177 9 82 chr5 149351743 149351932 -50278218 + MER2 DNA MER2_type 32 204 -141 370 157 129 14 chr5 149352056 149352126 -50278024 + MER2 DNA MER2_type 267 344 -1 319 207 98 12 chr5 149352176 149352258 -50277892 + L1MC4 LINE L1 6924 7012 -1030 * 434 237 161 65 chr5 149352251 149352437 -50277713 + L1ME2 LINE L1 5955 6158 -6 1893 169 7 7 chr5 149352456 149352757 -50277393 + AluJb SINE Alu 1 301 -11 2140 256 55 38 chr5 149352824 149352932 -50277218 + L1MC4 LINE L1 7138 7243 -799 1651 170 39 3 chr5 149352932 149353215 -50276935 + AluJo SINE Alu 1 293 -19 2140 256 55 38 chr5 149353215 149353993 -50276157 + L1MC4 LINE L1 7243 8039 -3 275 84 84 28 chr5 149354228 149354299 -50275851 + GA-rich Low_complexity Low_complexity 4 78 0 183 209 70 0 chr5 149354508 149354551 -50275599 + L2 LINE L2 3227 3272 0 207 315 115 65 chr5 149354685 149354885 -50275265 + L2 LINE L2 3062 3271 -1 213 327 10 48 chr5 149355306 149355410 -50274740 - MIR SINE MIR -155 107 8 1279 169 72 0 chr5 149355448 149355655 -50274495 + MER58A DNA MER1_type 3 224 0 640 248 74 10 chr5 149356264 149356466 -50273684 - MIR SINE MIR -37 225 11 2123 107 0 32 chr5 149356507 149356817 -50273333 + AluSc SINE Alu 1 300 -9 897 150 33 72 chr5 149357131 149357311 -50272839 - MER63A DNA MER1_type -37 173 1 317 325 83 6 chr5 149357405 149357585 -50272565 - MIR SINE MIR -50 212 14 * 353 294 66 47 chr5 149357572 149357783 -50272367 + L2 LINE L2 3099 3313 0 573 230 20 33 chr5 149358883 149359035 -50271115 - MER103 DNA DNA -8 158 9 183 42 0 0 chr5 149359047 149359071 -50271079 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2273 99 0 16 chr5 149359073 149359387 -50270763 + AluSg SINE Alu 1 309 -1 365 205 48 24 chr5 149359974 149360057 -50270093 + MIR SINE MIR 107 191 -71 778 247 135 22 chr5 149360072 149360339 -50269811 + L1ME3A LINE L1 5869 6165 -5 267 319 33 11 chr5 149361049 149361140 -50269010 - MIR SINE MIR -68 140 48 2872 133 43 5 chr5 149361371 149361813 -50268337 + LTR32 LTR ERVL 13 471 0 569 195 0 42 chr5 149362493 149362611 -50267539 - MIR SINE MIR -44 218 106 264 254 115 77 chr5 149362616 149362746 -50267404 - L2 LINE L2 0 3313 3179 262 330 22 22 chr5 149362737 149362828 -50267322 - MIR SINE MIR -149 113 23 * 302 289 36 72 chr5 149362888 149363193 -50266957 + HsTC2 DNA Tc2 3 296 -1602 * 1081 245 172 8 chr5 149363178 149363533 -50266617 + HsTC2 DNA Tc2 468 880 -1018 676 282 103 0 chr5 149363817 149364030 -50266120 - MIR SINE MIR 0 262 28 630 265 70 58 chr5 149364965 149365222 -50264928 - MIR SINE MIR 0 262 3 427 333 0 0 chr5 149365273 149365405 -50264745 + MIR SINE MIR 123 254 -8 23 0 0 0 chr5 149365482 149365505 -50264645 + AT_rich Low_complexity Low_complexity 1 23 0 2293 113 0 3 chr5 149365555 149365857 -50264293 + AluSx SINE Alu 1 301 -11 655 183 0 0 chr5 149366906 149367010 -50263140 - FLAM_A SINE Alu -38 104 1 275 151 198 0 chr5 149367081 149367167 -50262983 - L1MC4 LINE L1 0 8042 7940 195 42 0 0 chr5 149368614 149368638 -50261512 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2412 83 7 3 chr5 149368931 149369233 -50260917 - AluSq SINE Alu -9 304 2 601 219 16 23 chr5 149369284 149369412 -50260738 + FLAM_C SINE Alu 3 129 -14 227 317 79 0 chr5 149369521 149369622 -50260528 + MIR SINE MIR 97 205 -57 276 244 58 12 chr5 149369904 149369990 -50260160 - L2 LINE L2 -1 3271 3182 557 272 25 40 chr5 149370455 149370657 -50259493 - MIR SINE MIR -18 244 46 252 0 0 0 chr5 149370794 149370822 -50259328 + (GA)n Simple_repeat Simple_repeat 2 29 0 298 349 9 9 chr5 149371077 149371186 -50258964 + L2 LINE L2 3137 3245 -27 375 89 0 0 chr5 149372111 149372167 -50257983 + (TC)n Simple_repeat Simple_repeat 2 57 0 327 104 0 0 chr5 149372167 149372215 -50257935 + (CA)n Simple_repeat Simple_repeat 1 48 0 534 263 89 40 chr5 149372456 149372680 -50257470 + MIR SINE MIR 16 250 -12 675 252 108 34 chr5 149373501 149373854 -50256296 + L1MC4a LINE L1 5564 5942 -1866 531 191 0 121 chr5 149374069 149374210 -50255940 - FLAM_A SINE Alu -9 124 1 263 272 54 11 chr5 149374230 149374322 -50255828 + L1ME4a LINE L1 5945 6040 -81 201 147 0 0 chr5 149374370 149374404 -50255746 + (CAA)n Simple_repeat Simple_repeat 2 35 0 432 279 5 17 chr5 149375714 149375912 -50254238 + MIR SINE MIR 23 257 -5 4747 122 30 5 chr5 149376158 149376895 -50253255 + L1PA16 LINE L1 5409 6163 -3 2546 64 0 0 chr5 149377106 149377402 -50252748 + AluY SINE Alu 1 296 -15 266 318 0 0 chr5 149378092 149378158 -50251992 + HAL1 LINE L1 11 76 -2431 449 222 66 147 chr5 149378390 149378673 -50251477 + HAL1 LINE L1 2200 2454 -53 2425 60 0 23 chr5 149378673 149378974 -50251176 - AluY SINE Alu -17 294 1 449 222 66 147 chr5 149378974 149379024 -50251126 + HAL1 LINE L1 2454 2506 -1 507 198 0 8 chr5 149379762 149379869 -50250281 - MER5A DNA MER1_type -80 109 4 369 0 0 0 chr5 149379876 149379917 -50250233 + (CA)n Simple_repeat Simple_repeat 2 42 0 874 210 6 11 chr5 149379918 149380094 -50250056 - MER5B DNA MER1_type -3 175 1 385 240 50 0 chr5 149380150 149380250 -50249900 - L2 LINE L2 -21 3251 3147 344 162 118 0 chr5 149381073 149381141 -50249009 + MER81 DNA DNA 8 83 -31 468 259 18 0 chr5 149381751 149381863 -50248287 - MER81 DNA DNA 0 114 1 743 230 99 0 chr5 149383455 149383646 -50246504 + MIR SINE MIR 53 262 0 499 310 46 5 chr5 149383721 149383918 -50246232 + MIR SINE MIR 21 225 -37 2166 136 0 0 chr5 149384223 149384524 -50245626 - AluSx SINE Alu -11 301 1 473 282 138 11 chr5 149385116 149385297 -50244853 + MIR SINE MIR 6 209 -53 237 302 114 94 chr5 149385737 149385915 -50244235 - L2 LINE L2 -2 3270 3097 1071 164 86 20 chr5 149385915 149386159 -50243991 - MIR SINE MIR 0 262 3 237 302 114 94 chr5 149386159 149386651 -50243499 - L2 LINE L2 -175 3097 2569 352 281 98 43 chr5 149388017 149388094 -50242056 - MIR SINE MIR -65 197 126 2265 89 0 48 chr5 149388094 149388408 -50241742 - AluSp SINE Alu -14 299 1 352 281 98 43 chr5 149388408 149388494 -50241656 - MIR SINE MIR -136 126 25 509 234 55 14 chr5 149389067 149389212 -50240938 - L2 LINE L2 0 3272 3122 781 343 39 21 chr5 149389430 149389815 -50240335 - L2 LINE L2 -337 2977 2586 181 297 88 13 chr5 149391087 149391181 -50238969 - MIR3 SINE MIR -51 157 58 2620 18 0 0 chr5 149391181 149391462 -50238688 + AluYb8 SINE Alu 21 301 -17 181 297 88 13 chr5 149391462 149391496 -50238654 - MIR3 SINE MIR -150 58 28 1013 273 35 9 chr5 149393496 149393837 -50236313 + L1ME4a LINE L1 5527 5876 -245 445 370 18 42 chr5 149393841 149394171 -50235979 - L2 LINE L2 -8 3264 2943 1946 152 7 0 chr5 149394209 149394499 -50235651 + AluSx SINE Alu 1 292 -20 25 83 0 0 chr5 149394533 149394593 -50235557 + AT_rich Low_complexity Low_complexity 1 60 0 234 128 0 0 chr5 149394693 149394732 -50235418 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 1990 155 87 34 chr5 149395801 149396215 -50233935 + MER63B DNA MER1_type 1 436 0 306 302 129 17 chr5 149396215 149396331 -50233819 + L2 LINE L2 3144 3272 0 675 119 0 25 chr5 149396726 149396844 -50233306 + L1PA14 LINE L1 5923 6037 -124 189 0 0 0 chr5 149396995 149397016 -50233134 + (GGGTG)n Simple_repeat Simple_repeat 5 25 0 292 94 38 75 chr5 149397047 149397207 -50232943 + G-rich Low_complexity Low_complexity 1 154 0 243 100 43 29 chr5 149397248 149397318 -50232832 + G-rich Low_complexity Low_complexity 2 72 0 248 171 19 76 chr5 149397334 149397439 -50232711 + (TGGG)n Simple_repeat Simple_repeat 2 100 0 889 125 0 15 chr5 149397439 149397575 -50232575 + AluSg/x SINE Alu 174 307 -5 716 325 71 43 chr5 149398153 149398732 -50231418 - L2 LINE L2 -1 3271 2682 727 181 141 20 chr5 149398910 149399059 -50231091 + FRAM SINE Alu 4 170 -6 239 222 136 12 chr5 149399862 149399943 -50230207 - MIR SINE MIR -100 162 72 194 235 20 20 chr5 149400013 149400064 -50230086 + MER5B DNA MER1_type 17 67 -111 764 107 15 30 chr5 149400065 149400196 -50229954 + FLAM_C SINE Alu 5 133 0 596 235 42 7 chr5 149400280 149400441 -50229709 - L1ME1 LINE L1 -5 6161 6015 2168 122 9 45 chr5 149400863 149401200 -50228950 + MER1B DNA MER1_type 15 339 0 185 290 0 16 chr5 149401452 149401514 -50228636 + MIR SINE MIR 33 93 -115 3622 130 2 45 chr5 149401525 149401698 -50228452 - L1PA16 LINE L1 0 6166 5987 2419 159 36 14 chr5 149401698 149402113 -50228037 - MSTB LTR MaLR 0 426 3 3622 130 2 45 chr5 149402113 149402555 -50227595 - L1PA16 LINE L1 -179 5987 5578 259 242 0 61 chr5 149403110 149403176 -50226974 - MIR SINE MIR -62 146 85 623 302 45 20 chr5 149403354 149403599 -50226551 + MIR SINE MIR 12 262 0 1265 115 115 5 chr5 149404269 149404487 -50225663 + L1MB3 LINE L1 5940 6181 -2 250 170 19 19 chr5 149407328 149407381 -50222769 + (CA)n Simple_repeat Simple_repeat 1 53 0 290 274 37 67 chr5 149408817 149408952 -50221198 + MIR3 SINE MIR 72 202 -6 1565 277 83 28 chr5 149409816 149409890 -50220260 - L1 LINE L1 -1088 5058 4989 1932 119 49 7 chr5 149409890 149410176 -50219974 - AluSx SINE Alu -14 298 1 1565 277 83 28 chr5 149410176 149411201 -50218949 - L1 LINE L1 -1157 4989 3871 240 326 0 23 chr5 149412026 149412112 -50218038 - MIR SINE MIR -139 123 40 197 281 58 50 chr5 149413204 149413325 -50216825 + L2 LINE L2 2600 2721 -593 215 171 0 0 chr5 149413579 149413614 -50216536 - L2 LINE L2 -14 3299 3265 42 48 0 0 chr5 149414095 149414158 -50215992 + AT_rich Low_complexity Low_complexity 1 63 0 678 321 43 43 chr5 149414192 149414591 -50215559 + L2 LINE L2 2231 2629 -685 1214 81 29 0 chr5 149415265 149415438 -50214712 + L1PA13 LINE L1 5983 6160 -3 27 0 0 0 chr5 149416422 149416449 -50213701 + AT_rich Low_complexity Low_complexity 1 27 0 200 297 81 14 chr5 149416587 149416661 -50213489 + MIR SINE MIR 109 187 -75 235 274 149 40 chr5 149417153 149417449 -50212701 + L1ME4a LINE L1 4518 4845 -1301 1621 195 0 17 chr5 149417488 149417790 -50212360 - AluSx SINE Alu -15 297 1 449 267 43 17 chr5 149417791 149417907 -50212243 + L2 LINE L2 3195 3313 0 829 275 62 41 chr5 149418122 149418689 -50211461 + L1ME4a LINE L1 5342 5920 -201 368 183 92 15 chr5 149418715 149418846 -50211304 + L1ME4a LINE L1 5980 6120 -1 2796 224 134 0 chr5 149419503 149420269 -50209881 + Zaphod DNA AcHobo 2 870 -3161 451 113 12 0 chr5 149420425 149420505 -50209645 - L1 LINE L1 -2185 4663 4583 364 200 21 0 chr5 149420513 149420608 -50209542 + CT-rich Low_complexity Low_complexity 2 98 0 2019 132 28 0 chr5 149420616 149420904 -50209246 - AluSq SINE Alu -17 296 1 7440 204 18 6 chr5 149420904 149422681 -50207469 - L1 LINE L1 -2257 4591 2791 1376 193 184 32 chr5 149422690 149422822 -50207328 + MLT1D LTR MaLR 4 115 -390 1755 138 48 31 chr5 149422822 149423177 -50206973 - MLT1A1 LTR MaLR 0 365 5 1376 193 184 32 chr5 149423177 149423480 -50206670 + MLT1D LTR MaLR 115 505 0 216 207 103 0 chr5 149423696 149423754 -50206396 + L2 LINE L2 3137 3200 -72 2422 61 3 3 chr5 149424250 149424545 -50205605 - AluY SINE Alu -16 295 1 527 285 60 13 chr5 149425047 149425282 -50204868 - L1ME LINE L1 -363 5758 5513 1649 157 92 38 chr5 149425316 149425686 -50204464 - MLT1B LTR MaLR 0 390 1 2066 133 20 3 chr5 149426176 149426478 -50203672 + AluSx SINE Alu 1 307 -5 28 48 0 0 chr5 149426662 149426704 -50203446 + AT_rich Low_complexity Low_complexity 1 42 0 1183 220 7 13 chr5 149426929 149427238 -50202912 + L1MA3 LINE L1 2768 3074 -3072 * 7189 127 29 24 chr5 149427230 149427357 -50202793 + L1MA3 LINE L1 3985 4110 -2195 6490 106 24 39 chr5 149427357 149428444 -50201706 + MER11C LTR ERVK 1 1071 0 7189 127 29 24 chr5 149428444 149430356 -50199794 + L1MA3 LINE L1 4110 6036 -269 1900 121 7 52 chr5 149430356 149430662 -50199488 + AluSq SINE Alu 1 292 -21 7189 127 29 24 chr5 149430662 149430934 -50199216 + L1MA3 LINE L1 6036 6305 0 195 186 0 0 chr5 149431001 149431044 -50199106 + (CA)n Simple_repeat Simple_repeat 2 44 0 268 290 32 0 chr5 149431044 149431168 -50198982 + L1MC4 LINE L1 7913 8040 -2 200 343 51 20 chr5 149431683 149431819 -50198331 + L2 LINE L2 2838 2962 -310 29 110 0 0 chr5 149431939 149432021 -50198129 + AT_rich Low_complexity Low_complexity 1 82 0 225 200 0 0 chr5 149432059 149432109 -50198041 - L1MC4a LINE L1 0 7808 7759 3976 193 87 48 chr5 149432121 149433297 -50196853 - L1MC4 LINE L1 -143 7899 6678 840 205 113 29 chr5 149433889 149434128 -50196022 - MIR SINE MIR 0 262 4 262 277 33 55 chr5 149434149 149434261 -50195889 - MIR SINE MIR -62 146 39 180 0 0 0 chr5 149434474 149434494 -50195656 + (A)n Simple_repeat Simple_repeat 1 20 0 1717 172 0 24 chr5 149435411 149435708 -50194442 + AluJo SINE Alu 1 290 -22 23 33 0 0 chr5 149435755 149435785 -50194365 + AT_rich Low_complexity Low_complexity 1 30 0 1610 139 154 17 chr5 149435793 149435833 -50194317 - L1MB4 LINE L1 -1 6179 6146 1851 155 3 20 chr5 149435833 149436137 -50194013 + AluJo SINE Alu 1 299 -13 1610 139 154 17 chr5 149436137 149436499 -50193651 - L1MB4 LINE L1 -34 6146 5722 369 254 116 35 chr5 149436508 149436681 -50193469 - L1ME LINE L1 -351 5770 5584 1656 208 130 39 chr5 149436962 149437477 -50192673 - MER68 LTR ERV1 0 562 1 1163 245 89 9 chr5 149437662 149438187 -50191963 + L2 LINE L2 2697 3255 -58 330 236 270 11 chr5 149438378 149438552 -50191598 - LTR33 LTR ERVL -47 474 256 365 199 88 52 chr5 149438618 149438754 -50191396 - LTR33 LTR ERVL -380 141 1 302 302 75 50 chr5 149439292 149439451 -50190699 + MIR3 SINE MIR 1 163 -45 528 330 48 30 chr5 149439907 149440137 -50190013 - MIR SINE MIR -26 236 3 218 293 91 30 chr5 149440392 149440491 -50189659 + L2 LINE L2 3187 3291 -22 1179 175 0 0 chr5 149441521 149441727 -50188423 + MER46A DNA MER2_type 31 236 0 27 0 0 0 chr5 149442771 149442798 -50187352 + AT_rich Low_complexity Low_complexity 1 27 0 180 77 0 0 chr5 149444617 149444643 -50185507 + (CCG)n Simple_repeat Simple_repeat 3 28 0 2236 85 14 0 chr5 149445513 149445807 -50184343 - AluSq SINE Alu -15 298 1 1966 91 28 0 chr5 149445824 149446077 -50184073 - AluSc SINE Alu -12 297 38 1798 147 0 7 chr5 149446412 149446712 -50183438 + L1PA15 LINE L1 5868 6165 0 554 210 70 46 chr5 149446975 149447151 -50182999 + MIR SINE MIR 66 245 -17 580 216 42 48 chr5 149447170 149447337 -50182813 - L2 LINE L2 -49 3264 3099 1148 158 126 18 chr5 149447411 149447633 -50182517 + AluSx SINE Alu 1 246 -66 18892 90 32 6 chr5 149447775 149449453 -50180697 - Charlie3 DNA MER1_type 0 2706 933 2209 133 0 0 chr5 149449453 149449755 -50180395 - AluSx SINE Alu -10 302 1 18892 90 32 6 chr5 149449755 149450713 -50179437 - Charlie3 DNA MER1_type -1773 933 1 702 202 45 18 chr5 149450958 149451170 -50178980 - L1MC4 LINE L1 -1339 6656 6439 196 109 22 43 chr5 149451718 149451764 -50178386 + A-rich Low_complexity Low_complexity 4 48 0 1777 260 74 70 chr5 149451985 149452168 -50177982 - L2 LINE L2 -588 2726 2545 1882 104 52 15 chr5 149452168 149452436 -50177714 + AluSx SINE Alu 1 278 -34 1777 260 74 70 chr5 149452436 149452991 -50177159 - L2 LINE L2 -769 2545 1985 3407 142 59 53 chr5 149452991 149453119 -50177031 + L1MB8 LINE L1 5461 5587 -591 2477 145 45 9 chr5 149453119 149453566 -50176584 - L1PA15 LINE L1 0 6165 5703 3407 142 59 53 chr5 149453566 149454151 -50175999 + L1MB8 LINE L1 5587 6178 0 585 278 239 7 chr5 149454152 149454461 -50175689 - L2 LINE L2 -1320 1994 1614 1113 251 92 37 chr5 149454902 149455478 -50174672 - MLT1D LTR MaLR 0 505 19 2083 90 8 0 chr5 149455553 149455819 -50174331 - AluY SINE Alu -12 299 32 2073 118 0 0 chr5 149455886 149456166 -50173984 + AluSx SINE Alu 1 280 -32 850 188 6 12 chr5 149456376 149456546 -50173604 + L1PB4 LINE L1 5978 6146 -10 213 296 70 0 chr5 149456706 149456777 -50173373 - L3b LINE CR1 -87 1496 1421 251 315 54 20 chr5 149456957 149457106 -50173044 + L2 LINE L2 2313 2466 -848 776 279 86 32 chr5 149457403 149458099 -50172051 - L1MEc LINE L1 -4579 1817 1084 501 292 31 66 chr5 149459235 149459411 -50170739 + L1M4 LINE L1 3496 3677 -2469 1916 124 60 0 chr5 149459411 149459694 -50170456 + AluSx SINE Alu 1 300 -12 501 292 31 66 chr5 149459694 149460031 -50170119 + L1M4 LINE L1 3677 3991 -2155 616 98 9 36 chr5 149460055 149460167 -50169983 + MER65A LTR ERV1 87 195 -250 498 263 85 35 chr5 149460223 149460539 -50169611 + L1M4 LINE L1 4089 4420 -1726 1618 117 18 18 chr5 149460540 149460814 -50169336 + MER65A LTR ERV1 1 274 -171 31088 92 12 8 chr5 149460816 149466539 -50163611 + L1PA6 LINE L1 717 6462 -7 1106 82 28 11 chr5 149466581 149466763 -50163387 + MER65A LTR ERV1 261 445 0 721 223 22 22 chr5 149466806 149467035 -50163115 + L1M4 LINE L1 4458 4686 -1460 2355 148 19 40 chr5 149467042 149467469 -50162681 - MSTC LTR MaLR -5 423 6 430 279 71 26 chr5 149467617 149467771 -50162379 - MIR SINE MIR -70 192 32 394 316 61 0 chr5 149468144 149468258 -50161892 - MIR3 SINE MIR -46 162 42 463 289 8 8 chr5 149468645 149468766 -50161384 - L2 LINE L2 0 3313 3193 209 279 0 0 chr5 149469016 149469059 -50161091 - L2 LINE L2 -92 3221 3179 616 156 116 12 chr5 149469109 149469282 -50160868 - L1MA4 LINE L1 0 6300 6110 2188 114 3 7 chr5 149469286 149469592 -50160558 - AluSx SINE Alu -7 305 1 220 234 0 21 chr5 149470302 149470349 -50159801 - L2 LINE L2 -75 3238 3193 2118 139 3 22 chr5 149470479 149470796 -50159354 + AluSx SINE Alu 1 311 -1 2074 111 0 0 chr5 149471114 149471384 -50158766 + AluSx SINE Alu 1 270 -42 1830 96 4 20 chr5 149471460 149471710 -50158440 + AluSg SINE Alu 37 282 -28 315 0 0 0 chr5 149471710 149471745 -50158405 + (CA)n Simple_repeat Simple_repeat 2 36 0 2041 156 0 6 chr5 149471758 149472072 -50158078 + AluJb SINE Alu 1 312 0 735 222 7 7 chr5 149472095 149472248 -50157902 + FRAM SINE Alu 5 157 -9 332 216 153 27 chr5 149472372 149472483 -50157667 - L2 LINE L2 -10 3303 3179 278 287 27 60 chr5 149472516 149472571 -50157579 - MIR SINE MIR -71 191 136 1008 145 0 41 chr5 149472571 149472743 -50157407 - FRAM SINE Alu -1 165 1 278 287 27 60 chr5 149472743 149472837 -50157313 - MIR SINE MIR -126 136 47 1718 205 7 0 chr5 149474090 149474397 -50155753 + AluJo SINE Alu 1 309 -3 1018 185 11 109 chr5 149477914 149478179 -50151971 + AluJo SINE Alu 1 239 -73 369 0 0 0 chr5 149478196 149478237 -50151913 + (CA)n Simple_repeat Simple_repeat 2 42 0 361 325 64 6 chr5 149479221 149479378 -50150772 - L3b LINE CR1 -201 1382 1217 22 35 0 0 chr5 149479419 149479448 -50150702 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 149479983 149480004 -50150146 + AT_rich Low_complexity Low_complexity 1 21 0 442 152 13 0 chr5 149480042 149480121 -50150029 + MER116 DNA Mariner 1 80 0 272 281 70 47 chr5 149480701 149480829 -50149321 + MIR SINE MIR 23 153 -55 2043 100 10 61 chr5 149481157 149481468 -50148682 + AluSq SINE Alu 1 295 -18 2315 93 0 7 chr5 149482094 149482404 -50147746 + AluSx SINE Alu 1 308 -4 679 220 143 0 chr5 149482840 149483022 -50147128 + MER63A DNA MER1_type 1 208 -2 1903 177 12 0 chr5 149483064 149483409 -50146741 + L1PA16 LINE L1 5805 6153 -13 242 252 235 0 chr5 149483500 149483619 -50146531 - L3b LINE CR1 -199 1384 1238 2075 126 7 0 chr5 149484433 149484718 -50145432 + AluSx SINE Alu 1 287 -25 28 0 0 0 chr5 149484718 149484746 -50145404 + AT_rich Low_complexity Low_complexity 1 28 0 2522 69 0 0 chr5 149484996 149485301 -50144849 + AluY SINE Alu 1 305 -6 1922 91 102 14 chr5 149486124 149486399 -50143751 - AluSg SINE Alu -11 299 1 2227 102 3 0 chr5 149486452 149486755 -50143395 + AluSc SINE Alu 1 304 -5 1388 158 9 9 chr5 149486923 149487145 -50143005 - AluJb SINE Alu -90 222 1 246 356 26 17 chr5 149487279 149487394 -50142756 - L2 LINE L2 0 3313 3198 2382 75 0 38 chr5 149487426 149487746 -50142404 - AluY SINE Alu -3 308 1 188 217 196 54 chr5 149487937 149488029 -50142121 + L2 LINE L2 3121 3225 -47 1714 113 5 0 chr5 149489293 149489514 -50140636 + AluSx SINE Alu 1 222 -90 1035 103 0 7 chr5 149489602 149489747 -50140403 - AluSg/x SINE Alu -7 303 160 357 74 19 0 chr5 149489749 149489803 -50140347 + AluSp/q SINE Alu 240 294 -9 820 254 57 5 chr5 149490108 149490301 -50139849 + MIR SINE MIR 2 204 -58 1090 134 8 6 chr5 149490363 149490609 -50139541 - AluJb SINE Alu -16 296 1 201 175 0 0 chr5 149491660 149491700 -50138450 + (TA)n Simple_repeat Simple_repeat 2 41 0 1753 169 3 27 chr5 149491975 149492270 -50137880 + AluJo SINE Alu 1 288 -24 1052 135 139 14 chr5 149492483 149492691 -50137459 + MER46A DNA MER2_type 1 234 -2 265 305 11 98 chr5 149493160 149493334 -50136816 - MIR SINE MIR -64 198 40 2190 122 10 10 chr5 149493400 149493711 -50136439 + AluSx SINE Alu 1 311 -1 26 30 0 0 chr5 149494243 149494276 -50135874 + AT_rich Low_complexity Low_complexity 1 33 0 28 29 0 0 chr5 149495405 149495440 -50134710 + AT_rich Low_complexity Low_complexity 1 35 0 594 157 19 9 chr5 149496105 149496213 -50133937 + FLAM_A SINE Alu 21 129 -13 287 299 122 27 chr5 149496915 149497104 -50133046 + MIR SINE MIR 2 207 -55 2454 48 0 0 chr5 149497912 149498201 -50131949 + AluSc SINE Alu 1 289 -20 1085 152 6 6 chr5 149499222 149499393 -50130757 + AluJb SINE Alu 130 300 -12 247 231 143 0 chr5 149499448 149499539 -50130611 - L1ME4a LINE L1 -9 6112 6009 2058 95 51 7 chr5 149499598 149499893 -50130257 - AluSx SINE Alu -4 308 1 267 277 29 68 chr5 149499895 149500077 -50130073 - MIR SINE MIR -5 257 2 27 62 0 0 chr5 149500253 149500301 -50129849 + AT_rich Low_complexity Low_complexity 1 48 0 240 184 0 41 chr5 149500574 149500623 -50129527 + L2 LINE L2 3267 3313 0 23 24 0 24 chr5 149500713 149500735 -50129415 + AT_rich Low_complexity Low_complexity 1 23 -17 1633 103 162 4 chr5 149500735 149500988 -50129162 + AluSq SINE Alu 1 293 -10 23 24 0 24 chr5 149500988 149501006 -50129144 + AT_rich Low_complexity Low_complexity 23 40 0 27 29 0 0 chr5 149501188 149501222 -50128928 + AT_rich Low_complexity Low_complexity 1 34 0 182 290 258 0 chr5 149501402 149501495 -50128655 - L2 LINE L2 -216 3056 2940 393 218 13 0 chr5 149502023 149502101 -50128049 + MIR SINE MIR 174 252 -10 2044 136 0 13 chr5 149503095 149503403 -50126747 + AluJo SINE Alu 1 304 -8 1954 164 0 0 chr5 149503517 149503804 -50126346 + AluSx SINE Alu 13 299 -13 2365 90 0 3 chr5 149503804 149504103 -50126047 + AluSq SINE Alu 1 298 -15 663 212 124 51 chr5 149504169 149504316 -50125834 - HAL1 LINE L1 -85 2422 2287 1739 187 7 10 chr5 149504316 149504621 -50125529 - AluJo SINE Alu -8 304 1 663 212 124 51 chr5 149504621 149504845 -50125305 - HAL1 LINE L1 -220 2287 2024 1950 139 7 0 chr5 149504936 149505266 -50124884 - AluJb SINE Alu 0 332 1 2259 110 0 0 chr5 149505879 149506170 -50123980 - AluSx SINE Alu -15 297 7 897 207 6 0 chr5 149506456 149506620 -50123530 - FAM SINE Alu -13 172 8 963 164 17 45 chr5 149506634 149506811 -50123339 - FRAM SINE Alu -13 163 1 2108 131 6 6 chr5 149507014 149507326 -50122824 - AluJb SINE Alu 0 312 1 12492 122 80 53 chr5 149507712 149508765 -50121385 + Tigger2 DNA MER2_type 1 1024 -1694 2307 106 6 0 chr5 149508765 149509076 -50121074 + AluSp SINE Alu 1 313 0 12492 122 80 53 chr5 149509076 149510450 -50119700 + Tigger2 DNA MER2_type 1024 2493 -225 309 102 0 0 chr5 149510443 149510492 -50119658 - Alu SINE Alu -12 290 242 * 253 200 53 13 chr5 149510790 149510865 -50119285 + MLT1K LTR MaLR 511 588 0 236 196 54 0 chr5 149510896 149510952 -50119198 - MLT1H LTR MaLR 0 549 491 314 305 62 53 chr5 149511063 149511289 -50118861 - MLT1H LTR MaLR -240 309 82 2237 103 6 13 chr5 149511652 149511964 -50118186 - AluSx SINE Alu -2 310 1 2124 117 48 0 chr5 149512324 149512682 -50117468 + L1PA13 LINE L1 5786 6160 -3 1483 151 50 19 chr5 149515942 149516201 -50113949 + AluJb SINE Alu 1 267 -45 2294 94 0 10 chr5 149516214 149516511 -50113639 + AluSx SINE Alu 1 294 -18 1294 145 78 18 chr5 149516977 149517236 -50112914 - AluJo SINE Alu -77 235 1 1977 138 34 7 chr5 149517447 149517743 -50112407 - AluJo SINE Alu -8 304 1 1636 172 25 14 chr5 149517854 149518133 -50112017 + AluJo SINE Alu 1 282 -30 281 26 0 26 chr5 149518136 149518175 -50111975 + (TAA)n Simple_repeat Simple_repeat 2 39 0 2352 89 3 22 chr5 149518390 149518706 -50111444 + AluSx SINE Alu 1 310 -2 267 155 211 14 chr5 149519275 149519346 -50110804 - HAL1b LINE L1 -766 582 498 306 0 0 0 chr5 149519451 149519485 -50110665 + (T)n Simple_repeat Simple_repeat 1 34 0 2360 88 3 0 chr5 149519545 149519840 -50110310 - AluSp SINE Alu -17 296 1 581 218 55 12 chr5 149519980 149520145 -50110005 - MER104 DNA Tc2 -5 175 4 692 164 0 33 chr5 149520146 149520268 -50109882 + FLAM_C SINE Alu 1 118 -15 1838 144 4 4 chr5 149520290 149520568 -50109582 + AluJb SINE Alu 3 280 -32 895 75 108 0 chr5 149520628 149520748 -50109402 - AluJb SINE Alu -179 133 1 409 255 138 15 chr5 149520755 149520951 -50109199 - HAL1b LINE L1 -703 645 426 379 116 0 2 chr5 149521077 149521142 -50109008 - AluS SINE Alu -243 57 1 575 129 0 0 chr5 149521169 149521254 -50108896 + AluSg SINE Alu 62 146 -164 1860 226 93 9 chr5 149521296 149521876 -50108274 - L1MC4 LINE L1 -131 7911 7283 1355 184 110 19 chr5 149521891 149522066 -50108084 - L1MC4 LINE L1 -836 7057 6899 1158 170 96 5 chr5 149522066 149522284 -50107866 + MER8 DNA MER2_type 2 239 0 1355 184 110 19 chr5 149522284 149522535 -50107615 - L1MC4 LINE L1 -994 6899 6488 744 77 154 0 chr5 149523705 149523809 -50106341 + AluSq/x SINE Alu 1 120 -192 197 33 33 0 chr5 149523811 149523841 -50106309 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr5 149525675 149525699 -50104451 + AT_rich Low_complexity Low_complexity 1 24 0 2205 118 3 13 chr5 149525702 149526017 -50104133 + AluSx SINE Alu 1 312 0 1953 164 0 0 chr5 149526263 149526562 -50103588 - AluSx SINE Alu -13 299 1 2129 114 13 7 chr5 149527641 149527940 -50102210 - AluSx SINE Alu -11 301 1 2338 92 0 3 chr5 149528247 149528542 -50101608 - AluSg SINE Alu -16 294 1 1945 125 0 18 chr5 149528806 149529086 -50101064 - AluSq SINE Alu -21 292 18 354 23 0 0 chr5 149530026 149530069 -50100081 + (CA)n Simple_repeat Simple_repeat 2 44 0 3681 181 37 24 chr5 149530154 149530934 -50099216 + L1M4c LINE L1 3 792 -5592 576 171 9 0 chr5 149530945 149531050 -50099100 - AluJo SINE Alu -178 134 29 4756 123 53 82 chr5 149531159 149531554 -50098596 + L1M4c LINE L1 800 1205 -5179 2026 129 3 10 chr5 149531554 149531856 -50098294 + AluSx SINE Alu 5 304 -8 4756 123 53 82 chr5 149531856 149532237 -50097913 + L1M4c LINE L1 1205 1596 -4788 2102 152 3 0 chr5 149532237 149532546 -50097604 + AluSg SINE Alu 1 310 0 4756 123 53 82 chr5 149532546 149532615 -50097535 + L1M4c LINE L1 1596 1665 -4719 1625 126 0 5 chr5 149532615 149532830 -50097320 + AluSg/x SINE Alu 77 290 -20 4756 123 53 82 chr5 149532830 149532845 -50097305 + L1M4c LINE L1 1665 1679 -4705 836 158 0 8 chr5 149532845 149532978 -50097172 + FLAM_C SINE Alu 2 133 0 4756 123 53 82 chr5 149532978 149533321 -50096829 + L1M4c LINE L1 1679 2067 -4317 2146 85 7 0 chr5 149533331 149533602 -50096548 + AluSg SINE Alu 37 309 -1 836 153 60 0 chr5 149533619 149533802 -50096348 + L1M4c LINE L1 3728 3921 -2461 3831 159 52 8 chr5 149533804 149534547 -50095603 + L1MA9 LINE L1 3562 4343 -1803 1373 153 8 4 chr5 149534547 149534782 -50095368 - MER46A DNA MER2_type 0 236 1 3831 159 52 8 chr5 149534782 149534825 -50095325 + L1MA9 LINE L1 4343 4383 -1763 1675 194 6 16 chr5 149534825 149535140 -50095010 + AluJb SINE Alu 1 312 0 771 184 0 22 chr5 149535146 149535282 -50094868 + FLAM_A SINE Alu 1 133 0 1456 112 0 10 chr5 149535309 149535505 -50094645 + AluSg/x SINE Alu 105 298 -14 1949 153 13 7 chr5 149535513 149535821 -50094329 + AluJb SINE Alu 1 310 -2 1049 81 0 15 chr5 149535821 149535957 -50094193 + AluSq/x SINE Alu 1 134 -178 1795 100 4 0 chr5 149535959 149536198 -50093952 + AluSp SINE Alu 68 307 -6 5100 140 52 11 chr5 149536198 149536320 -50093830 + L1MA9 LINE L1 5307 5423 -889 2227 123 0 0 chr5 149536320 149536621 -50093529 + AluSx SINE Alu 1 301 -11 5100 140 52 11 chr5 149536621 149537461 -50092689 + L1MA9 LINE L1 5423 6308 -4 3308 144 16 3 chr5 149537466 149538037 -50092113 + L1MB3 LINE L1 5603 6180 -3 2352 89 3 22 chr5 149538180 149538496 -50091654 - AluSx SINE Alu -2 310 1 281 26 0 26 chr5 149538711 149538750 -50091400 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1636 172 25 14 chr5 149538753 149539032 -50091118 - AluJo SINE Alu -30 282 1 1977 138 34 7 chr5 149539143 149539439 -50090711 + AluJo SINE Alu 1 304 -8 1294 143 72 18 chr5 149539650 149539873 -50090277 + AluJo SINE Alu 1 235 -77 2294 94 0 10 chr5 149540375 149540672 -50089478 - AluSx SINE Alu -18 294 1 1483 151 50 19 chr5 149540685 149540944 -50089206 - AluJb SINE Alu -45 267 1 2124 117 48 0 chr5 149544204 149544562 -50085588 - L1PA13 LINE L1 -3 6160 5786 2237 103 6 13 chr5 149544922 149545234 -50084916 + AluSx SINE Alu 1 310 -2 314 305 62 53 chr5 149545597 149545823 -50084327 + MLT1H LTR MaLR 82 309 -240 236 196 54 0 chr5 149545934 149545990 -50084160 + MLT1H LTR MaLR 491 549 0 253 200 53 13 chr5 149546021 149546096 -50084054 - MLT1K LTR MaLR 0 588 511 309 102 0 0 chr5 149546394 149546443 -50083707 + Alu SINE Alu 241 289 -12 * 12492 122 80 53 chr5 149546436 149547810 -50082340 - Tigger2 DNA MER2_type -225 2493 1024 2307 106 6 0 chr5 149547810 149548121 -50082029 - AluSp SINE Alu 0 313 1 12492 122 80 53 chr5 149548121 149549174 -50080976 - Tigger2 DNA MER2_type -1694 1024 1 2108 131 6 6 chr5 149549560 149549872 -50080278 + AluJb SINE Alu 1 312 0 963 164 17 45 chr5 149550075 149550252 -50079898 + FRAM SINE Alu 1 163 -13 897 207 6 0 chr5 149550266 149550430 -50079720 + FAM SINE Alu 8 172 -13 2259 110 0 0 chr5 149550716 149551007 -50079143 + AluSx SINE Alu 7 297 -15 1951 139 7 0 chr5 149551620 149551950 -50078200 + AluJb SINE Alu 1 332 0 663 212 124 51 chr5 149552041 149552265 -50077885 + HAL1 LINE L1 2024 2287 -220 1739 187 7 10 chr5 149552265 149552570 -50077580 + AluJo SINE Alu 1 304 -8 663 212 124 51 chr5 149552570 149552717 -50077433 + HAL1 LINE L1 2287 2422 -85 2365 90 0 3 chr5 149552783 149553082 -50077068 - AluSq SINE Alu -15 298 1 1954 164 0 0 chr5 149553082 149553369 -50076781 - AluSx SINE Alu -13 299 13 2044 136 0 13 chr5 149553483 149553791 -50076359 - AluJo SINE Alu -8 304 1 393 218 13 0 chr5 149554785 149554863 -50075287 - MIR SINE MIR -10 252 174 182 290 258 0 chr5 149555391 149555484 -50074666 + L2 LINE L2 2940 3056 -216 27 29 0 0 chr5 149555664 149555698 -50074452 + AT_rich Low_complexity Low_complexity 1 34 0 23 24 0 24 chr5 149555880 149555898 -50074252 + AT_rich Low_complexity Low_complexity 1 18 -22 1633 103 162 4 chr5 149555898 149556151 -50073999 - AluSq SINE Alu -10 293 1 23 24 0 24 chr5 149556151 149556173 -50073977 + AT_rich Low_complexity Low_complexity 18 40 0 240 184 0 41 chr5 149556263 149556312 -50073838 - L2 LINE L2 0 3313 3267 27 62 0 0 chr5 149556585 149556633 -50073517 + AT_rich Low_complexity Low_complexity 1 48 0 267 277 29 68 chr5 149556809 149556991 -50073159 + MIR SINE MIR 2 257 -5 2058 95 51 7 chr5 149556993 149557288 -50072862 + AluSx SINE Alu 1 308 -4 247 231 143 0 chr5 149557347 149557438 -50072712 + L1ME4a LINE L1 6009 6112 -9 1085 152 6 6 chr5 149557493 149557664 -50072486 - AluJb SINE Alu -12 300 130 2454 48 0 0 chr5 149558685 149558974 -50071176 - AluSc SINE Alu -20 289 1 287 299 122 27 chr5 149559782 149559971 -50070179 - MIR SINE MIR -55 207 2 594 157 19 9 chr5 149560673 149560781 -50069369 - FLAM_A SINE Alu -13 129 21 28 29 0 0 chr5 149561446 149561481 -50068669 + AT_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr5 149562610 149562643 -50067507 + AT_rich Low_complexity Low_complexity 1 33 0 2190 122 10 10 chr5 149563175 149563486 -50066664 - AluSx SINE Alu -1 311 1 265 305 11 98 chr5 149563552 149563726 -50066424 + MIR SINE MIR 40 198 -64 1052 135 139 14 chr5 149564195 149564403 -50065747 - MER46A DNA MER2_type -2 234 1 1753 169 3 27 chr5 149564616 149564911 -50065239 - AluJo SINE Alu -24 288 1 201 175 0 0 chr5 149565186 149565226 -50064924 + (TA)n Simple_repeat Simple_repeat 2 41 0 1090 134 8 6 chr5 149566277 149566523 -50063627 + AluJb SINE Alu 1 296 -16 820 254 57 5 chr5 149566585 149566778 -50063372 - MIR SINE MIR -58 204 2 357 74 19 0 chr5 149567083 149567137 -50063013 - AluSp/q SINE Alu -9 294 240 1035 103 0 7 chr5 149567139 149567284 -50062866 + AluSg/x SINE Alu 160 303 -7 1714 113 5 0 chr5 149567372 149567593 -50062557 - AluSx SINE Alu -90 222 1 184 217 196 54 chr5 149568857 149568949 -50061201 - L2 LINE L2 -47 3225 3121 2368 75 0 38 chr5 149569140 149569460 -50060690 + AluY SINE Alu 1 308 -3 247 356 26 17 chr5 149569492 149569607 -50060543 + L2 LINE L2 3198 3313 0 1367 158 9 9 chr5 149569741 149569963 -50060187 + AluJb SINE Alu 1 222 -90 2210 102 3 0 chr5 149570131 149570434 -50059716 - AluSc SINE Alu -5 304 1 1899 91 102 14 chr5 149570487 149570762 -50059388 + AluSg SINE Alu 1 299 -11 2518 69 0 0 chr5 149571585 149571890 -50058260 - AluY SINE Alu -6 305 1 28 0 0 0 chr5 149572140 149572168 -50057982 + AT_rich Low_complexity Low_complexity 1 28 0 2056 126 7 0 chr5 149572168 149572453 -50057697 - AluSx SINE Alu -25 287 1 248 252 235 0 chr5 149573267 149573386 -50056764 + L3b LINE CR1 1238 1384 -199 1917 177 12 0 chr5 149573477 149573822 -50056328 - L1PA16 LINE L1 -13 6153 5805 688 220 143 0 chr5 149573864 149574046 -50056104 - MER63A DNA MER1_type -2 208 1 2304 93 0 7 chr5 149574482 149574792 -50055358 - AluSx SINE Alu -4 308 1 2021 100 10 61 chr5 149575418 149575729 -50054421 - AluSq SINE Alu -18 295 1 272 281 70 47 chr5 149576057 149576185 -50053965 - MIR SINE MIR -55 153 23 448 152 13 0 chr5 149576765 149576844 -50053306 - MER116 DNA Mariner 0 80 1 21 0 0 0 chr5 149576882 149576903 -50053247 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 149577438 149577467 -50052683 + AT_rich Low_complexity Low_complexity 1 29 0 358 325 64 6 chr5 149577508 149577665 -50052485 + L3b LINE CR1 1217 1382 -201 369 0 0 0 chr5 149578649 149578690 -50051460 + (TG)n Simple_repeat Simple_repeat 2 42 0 1010 185 11 109 chr5 149578707 149578972 -50051178 - AluJo SINE Alu -73 239 1 1659 200 7 0 chr5 149582506 149582796 -50047354 - AluJo SINE Alu -20 292 1 268 323 40 0 chr5 149584044 149584143 -50046007 + MIR SINE MIR 43 145 -63 1016 151 0 41 chr5 149584143 149584315 -50045835 + FRAM SINE Alu 1 165 -11 334 216 153 27 chr5 149584403 149584514 -50045636 + L2 LINE L2 3179 3303 -10 726 222 7 7 chr5 149584638 149584791 -50045359 - FRAM SINE Alu -9 157 5 2006 156 0 6 chr5 149584814 149585128 -50045022 - AluJb SINE Alu 0 312 1 315 0 0 0 chr5 149585141 149585176 -50044974 + (TG)n Simple_repeat Simple_repeat 2 36 0 1828 96 4 20 chr5 149585176 149585426 -50044724 - AluSg SINE Alu -28 282 37 2065 111 0 0 chr5 149585502 149585772 -50044378 - AluSx SINE Alu -42 270 1 2074 139 3 22 chr5 149586090 149586407 -50043743 - AluSx SINE Alu -1 311 1 217 234 0 21 chr5 149586537 149586584 -50043566 + L2 LINE L2 3193 3238 -75 2164 114 3 7 chr5 149587294 149587600 -50042550 + AluSx SINE Alu 1 305 -7 662 156 116 12 chr5 149587604 149587777 -50042373 + L1MA4 LINE L1 6110 6300 0 210 279 0 0 chr5 149587827 149587870 -50042280 + L2 LINE L2 3179 3221 -92 462 289 8 8 chr5 149588120 149588241 -50041909 + L2 LINE L2 3193 3313 0 397 316 61 0 chr5 149588628 149588742 -50041408 + MIR3 SINE MIR 42 162 -46 437 279 71 26 chr5 149589115 149589269 -50040881 + MIR SINE MIR 32 192 -70 2083 119 18 32 chr5 149590219 149590562 -50039588 - MER44D DNA MER2_type 0 609 2 314 268 58 80 chr5 149590575 149590713 -50039437 + MIR SINE MIR 18 146 -62 270 247 134 21 chr5 149591565 149591662 -50038488 + MIR3 SINE MIR 71 178 -30 27 62 0 0 chr5 149592107 149592155 -50037995 + AT_rich Low_complexity Low_complexity 1 48 0 2042 145 7 0 chr5 149593253 149593563 -50036587 - AluSx SINE Alu 0 312 1 2061 166 16 25 chr5 149593815 149594183 -50035967 - MLT1A1 LTR MaLR 0 365 1 34 55 0 0 chr5 149594373 149594428 -50035722 + AT_rich Low_complexity Low_complexity 1 55 0 1129 163 67 86 chr5 149594432 149594629 -50035521 + Charlie5 DNA MER1_type 2244 2432 -192 1945 119 7 44 chr5 149594629 149594924 -50035226 - AluSx SINE Alu -28 284 1 1129 163 67 86 chr5 149594924 149595112 -50035038 + Charlie5 DNA MER1_type 2432 2622 -2 5415 62 1 0 chr5 149595262 149595939 -50034211 - L1PA11 LINE L1 0 6174 5497 2598 144 9 2 chr5 149595943 149596401 -50033749 - L1P LINE L1 -1328 4818 4358 2125 141 0 6 chr5 149597115 149597428 -50032722 - AluSx SINE Alu -1 311 1 324 285 152 13 chr5 149598207 149598358 -50031792 + MIR SINE MIR 91 262 0 407 349 41 29 chr5 149598792 149598964 -50031186 - MIR3 SINE MIR -9 199 26 2459 53 3 3 chr5 149599193 149599496 -50030654 + AluY SINE Alu 1 303 -8 638 220 0 0 chr5 149599508 149599626 -50030524 + L2 LINE L2 3196 3313 0 278 300 200 20 chr5 149600337 149600487 -50029663 + MIR3 SINE MIR 19 195 -13 30 0 0 0 chr5 149600710 149600740 -50029410 + AT_rich Low_complexity Low_complexity 1 30 0 1228 167 0 31 chr5 149601639 149601866 -50028284 - AluJo SINE Alu -8 304 85 1015 181 12 0 chr5 149602017 149602188 -50027962 - FAM SINE Alu -2 173 1 445 221 85 57 chr5 149603238 149603497 -50026653 - MLT1G LTR MaLR -90 505 185 1601 196 3 22 chr5 149604369 149604686 -50025464 - AluJo SINE Alu -1 311 1 757 272 10 5 chr5 149605045 149605240 -50024910 - MIR SINE MIR -36 226 31 5928 55 1 0 chr5 149605424 149606156 -50023994 - L1PA7 LINE L1 -2 6152 5420 395 59 162 0 chr5 149606567 149606635 -50023515 + L1PA16 LINE L1 6086 6164 -2 1629 142 48 4 chr5 149607467 149607735 -50022415 - AluJb SINE Alu -15 297 18 1905 107 3 57 chr5 149607781 149608112 -50022038 - AluSg SINE Alu 0 315 1 353 203 274 105 chr5 149608206 149608359 -50021791 - MER5A DNA MER1_type 0 189 11 248 286 63 40 chr5 149608434 149608560 -50021590 - L2 LINE L2 -491 2823 2695 21 0 0 0 chr5 149609180 149609201 -50020949 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 149610037 149610059 -50020091 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 149610265 149610295 -50019855 + AT_rich Low_complexity Low_complexity 1 30 0 306 290 0 37 chr5 149610378 149610485 -50019665 - L1ME LINE L1 -681 5440 5338 2298 96 3 3 chr5 149613297 149613600 -50016550 - AluSq SINE Alu -10 303 1 779 131 284 38 chr5 149614625 149614808 -50015342 - MER46A DNA MER2_type -6 230 3 219 257 59 118 chr5 149615411 149615547 -50014603 - MIR3 SINE MIR -15 193 66 1192 182 129 42 chr5 149615592 149615972 -50014178 + LTR37A LTR ERV1 14 426 0 1856 168 102 22 chr5 149616012 149616471 -50013679 - LTR54B LTR ERV1 -2 496 1 4157 174 22 3 chr5 149616605 149617389 -50012761 - L1MB5 LINE L1 -8 6166 5368 25 0 0 0 chr5 149617531 149617556 -50012594 + AT_rich Low_complexity Low_complexity 1 25 0 1990 148 0 7 chr5 149617837 149618128 -50012022 - AluJb SINE Alu -19 293 5 284 254 0 0 chr5 149618175 149618234 -50011916 - MIR SINE MIR -4 258 200 370 266 43 72 chr5 149618236 149618375 -50011775 + L2 LINE L2 3178 3312 -1 * 732 242 7 3 chr5 149618373 149618543 -50011607 - MIR SINE MIR -62 146 10 370 354 31 0 chr5 149618707 149618837 -50011313 + MIR3 SINE MIR 30 163 -45 23 0 0 0 chr5 149618939 149618962 -50011188 + AT_rich Low_complexity Low_complexity 1 23 0 25 65 0 0 chr5 149619337 149619383 -50010767 + AT_rich Low_complexity Low_complexity 1 46 0 1049 150 0 56 chr5 149619500 149619680 -50010470 - FAM SINE Alu -5 170 1 438 284 79 0 chr5 149620316 149620443 -50009707 - L2 LINE L2 0 3272 3136 731 246 37 5 chr5 149620879 149621066 -50009084 - MIR SINE MIR 0 262 70 297 294 35 0 chr5 149621121 149621206 -50008944 - MIR SINE MIR -77 131 44 2022 173 54 67 chr5 149621277 149621947 -50008203 - L1MC5 LINE L1 -94 7867 7207 2016 131 21 3 chr5 149621951 149622234 -50007916 - AluSx SINE Alu -24 288 1 481 257 28 0 chr5 149622290 149622434 -50007716 + L1MEc LINE L1 38 185 -6211 1543 237 62 6 chr5 149622436 149622938 -50007212 + L1MEc LINE L1 792 1321 -5075 288 319 137 58 chr5 149623515 149623844 -50006306 - L2 LINE L2 -2 3270 2916 496 351 57 13 chr5 149623855 149624083 -50006067 - MIR SINE MIR -13 249 12 1119 141 0 42 chr5 149624394 149624586 -50005564 + FRAM SINE Alu 1 176 0 2972 153 65 24 chr5 149624588 149625177 -50004973 - L1MA9 LINE L1 -39 6273 5661 255 125 0 0 chr5 149625253 149625293 -50004857 + (GGGA)n Simple_repeat Simple_repeat 2 41 0 1753 156 20 10 chr5 149625332 149625633 -50004517 - AluJo SINE Alu -8 304 1 339 302 62 0 chr5 149626268 149626364 -50003786 + MIR SINE MIR 31 132 -76 202 278 0 0 chr5 149626400 149626454 -50003696 + C-rich Low_complexity Low_complexity 5 58 0 2523 38 0 0 chr5 149626830 149627118 -50003032 - AluY SINE Alu -19 292 5 204 420 0 0 chr5 149627173 149627254 -50002896 - MIR SINE MIR -86 122 42 211 239 216 38 chr5 149627733 149627872 -50002278 + MIR SINE MIR 2 162 -61 524 253 93 50 chr5 149627872 149628054 -50002096 + MIR SINE MIR 73 262 0 254 243 40 14 chr5 149628072 149628146 -50002004 + MIR SINE MIR 161 236 -26 429 266 75 4 chr5 149628338 149628512 -50001638 - MIR SINE MIR 0 262 2 22 56 0 0 chr5 149628580 149628616 -50001534 + AT_rich Low_complexity Low_complexity 1 36 0 505 283 19 28 chr5 149628630 149628842 -50001308 + L1ME LINE L1 5600 5809 -312 277 316 0 11 chr5 149629321 149629416 -50000734 - MIR SINE MIR -82 126 33 291 274 81 102 chr5 149630192 149630378 -49999772 + L2 LINE L2 3090 3271 -1 * 321 241 262 0 chr5 149630377 149630522 -49999628 + MIR SINE MIR 20 202 -60 506 273 114 104 chr5 149630630 149630785 -49999365 + L2 LINE L2 2980 3141 -131 2205 104 7 29 chr5 149630785 149631092 -49999058 - AluSq SINE Alu -13 300 1 506 273 114 104 chr5 149631092 149631225 -49998925 + L2 LINE L2 3141 3271 -1 183 129 0 0 chr5 149631435 149631466 -49998684 + (GAAA)n Simple_repeat Simple_repeat 4 34 0 2300 87 13 7 chr5 149631488 149631786 -49998364 - AluSq SINE Alu -13 300 1 299 253 47 53 chr5 149631792 149632022 -49998128 + L1MDa LINE L1 1716 1990 -4629 432 261 26 43 chr5 149632045 149632120 -49998030 + L1M4 LINE L1 4142 4217 -1929 2132 136 3 3 chr5 149632120 149632430 -49997720 + AluJb SINE Alu 1 310 -2 432 261 26 43 chr5 149632430 149632584 -49997566 + L1M4 LINE L1 4217 4367 -1779 371 329 81 49 chr5 149633491 149633737 -49996413 - L2 LINE L2 -13 3259 3006 2008 123 37 7 chr5 149633880 149634180 -49995970 - AluJo SINE Alu -3 309 1 4355 115 11 43 chr5 149634727 149635512 -49994638 + L1MA8 LINE L1 5511 6270 -21 4256 15 4 25 chr5 149636075 149636594 -49993556 + L1PA3 LINE L1 5648 6155 0 2775 125 26 0 chr5 149637195 149637610 -49992540 - MSTB LTR MaLR 0 426 1 2265 121 0 0 chr5 149637655 149637962 -49992188 - AluSx SINE Alu -5 307 1 224 276 0 17 chr5 149638107 149638165 -49991985 + GA-rich Low_complexity Low_complexity 2 58 0 1562 176 50 7 chr5 149638281 149638560 -49991590 - AluJb SINE Alu -21 291 1 2098 73 0 98 chr5 149641216 149641543 -49988607 - AluSc SINE Alu -14 295 1 1521 157 20 127 chr5 149641664 149642073 -49988077 + MLT1A1 LTR MaLR 1 365 0 506 277 40 45 chr5 149642073 149642275 -49987875 + MIR SINE MIR 51 251 -11 436 167 0 13 chr5 149642990 149643068 -49987082 + AluJo SINE Alu 121 197 -115 3350 81 2 0 chr5 149643094 149643527 -49986623 - MER57B LTR ERV1 0 434 1 480 242 100 36 chr5 149643797 149643991 -49986159 + MIR SINE MIR 9 212 -50 881 78 0 127 chr5 149643994 149644084 -49986066 + L1PA15 LINE L1 6016 6077 -88 2153 100 3 17 chr5 149644084 149644385 -49985765 - AluSc SINE Alu -12 297 1 881 78 0 127 chr5 149644385 149644460 -49985690 + L1PA15 LINE L1 6077 6160 -5 212 367 0 50 chr5 149644578 149644717 -49985433 - MIR SINE MIR -49 213 82 339 273 117 42 chr5 149645891 149646041 -49984109 - MIR3 SINE MIR -24 184 2 254 328 117 47 chr5 149646416 149646544 -49983606 - MIR SINE MIR -67 195 59 249 33 0 0 chr5 149647936 149647966 -49982184 + (TA)n Simple_repeat Simple_repeat 2 31 0 1447 83 24 0 chr5 149648076 149648281 -49981869 + L1PA13 LINE L1 5951 6160 -3 27 0 0 0 chr5 149649265 149649292 -49980858 + AT_rich Low_complexity Low_complexity 1 27 0 200 297 81 14 chr5 149649430 149649504 -49980646 + MIR SINE MIR 109 187 -75 235 274 149 40 chr5 149649996 149650292 -49979858 + L1ME4a LINE L1 4518 4845 -1301 2161 128 0 0 chr5 149650331 149650627 -49979523 - AluSx SINE Alu -16 296 1 1830 121 0 0 chr5 149650813 149651053 -49979097 + AluSx SINE Alu 11 250 -62 1040 202 0 24 chr5 149651055 149651268 -49978882 - AluJo SINE Alu -104 208 1 449 267 43 17 chr5 149651269 149651385 -49978765 + L2 LINE L2 3195 3313 0 829 279 60 39 chr5 149651600 149652167 -49977983 + L1ME4a LINE L1 5342 5920 -201 368 183 92 15 chr5 149652193 149652324 -49977826 + L1ME4a LINE L1 5980 6120 -1 2770 226 134 0 chr5 149652981 149653747 -49976403 + Zaphod DNA AcHobo 2 870 -3161 286 306 0 0 chr5 149653936 149654034 -49976116 + C-rich Low_complexity Low_complexity 1 98 0 1488 115 26 34 chr5 149654232 149654466 -49975684 + AluSg/x SINE Alu 67 298 -14 1108 102 20 5 chr5 149654564 149654761 -49975389 - L1MA7 LINE L1 -1 6290 6091 1197 204 132 25 chr5 149654812 149655047 -49975103 + Zaphod DNA AcHobo 3597 3805 -226 1775 141 21 77 chr5 149655047 149655373 -49974777 + AluJo SINE Alu 1 308 -4 1197 204 132 25 chr5 149655373 149655530 -49974620 + Zaphod DNA AcHobo 3805 4031 0 644 332 56 47 chr5 149655703 149656043 -49974107 + L2 LINE L2 2526 2868 -446 572 175 0 0 chr5 149656878 149656975 -49973175 - Tigger7 DNA MER2_type -1 2586 2490 1033 250 26 0 chr5 149656985 149657213 -49972937 - Tigger7 DNA MER2_type -2253 234 1 2752 198 66 7 chr5 149657223 149657825 -49972325 - MER82 DNA MER2_type 0 653 16 516 310 41 4 chr5 149657980 149658225 -49971925 - L1M4 LINE L1 -1033 5113 4860 1129 192 22 125 chr5 149658246 149658405 -49971745 + MLT1A1 LTR MaLR 1 175 -190 743 155 0 70 chr5 149658405 149658547 -49971603 + FLAM_C SINE Alu 1 132 -1 1129 192 22 125 chr5 149658547 149658794 -49971356 + MLT1A1 LTR MaLR 175 365 0 1488 49 11 11 chr5 149659019 149659202 -49970948 - AluSg SINE Alu -126 184 2 216 200 0 0 chr5 149660028 149660068 -49970082 + L2 LINE L2 3262 3301 -12 263 237 39 90 chr5 149660073 149660229 -49969921 - L2 LINE L2 -191 3081 2934 742 254 0 17 chr5 149660696 149660869 -49969281 - FRAM SINE Alu -6 170 1 485 257 115 0 chr5 149661082 149661230 -49968920 - MER103 DNA DNA 0 166 2 1221 155 0 5 chr5 149661665 149661859 -49968291 - AluSq SINE Alu -5 308 116 1326 206 62 15 chr5 149661859 149662198 -49967952 + MER72-int LTR ERV1 6404 6758 0 3236 154 104 7 chr5 149662205 149662823 -49967327 + MER72 LTR ERV1 8 685 -37 327 49 0 0 chr5 149662831 149662872 -49967278 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 554 183 117 17 chr5 149662881 149663001 -49967149 + FLAM_C SINE Alu 2 133 0 255 234 140 29 chr5 149663018 149663189 -49966961 - L1ME LINE L1 -244 5877 5688 707 235 163 0 chr5 149663193 149663389 -49966761 + MIR SINE MIR 5 232 -30 216 0 0 0 chr5 149663547 149663571 -49966579 + (ATG)n Simple_repeat Simple_repeat 1 24 0 268 316 25 13 chr5 149663571 149663650 -49966500 - L2 LINE L2 -40 3273 3194 4031 149 78 26 chr5 149664405 149665176 -49964974 - L1MB8 LINE L1 -5 6173 5303 1391 24 0 0 chr5 149665176 149665340 -49964810 + L1PA4 LINE L1 5990 6153 -2 4031 149 78 26 chr5 149665340 149665910 -49964240 - L1MB8 LINE L1 -875 5303 4764 685 231 0 0 chr5 149665913 149666034 -49964116 - FLAM_A SINE Alu -12 121 1 207 0 0 0 chr5 149666041 149666064 -49964086 + (T)n Simple_repeat Simple_repeat 1 23 0 235 352 0 0 chr5 149666110 149666181 -49963969 + L2 LINE L2 2266 2336 -978 189 147 0 0 chr5 149666349 149666383 -49963767 + L2 LINE L2 2335 2368 -946 21 36 0 0 chr5 149666450 149666478 -49963672 + AT_rich Low_complexity Low_complexity 1 28 0 1829 119 7 18 chr5 149667209 149667486 -49962664 - AluSx SINE Alu -4 308 35 217 227 152 0 chr5 149667672 149667738 -49962412 - MIR SINE MIR -126 136 61 282 269 331 0 chr5 149667999 149668129 -49962021 + MIR3 SINE MIR 36 208 0 286 275 47 40 chr5 149668199 149668348 -49961802 - MER117 DNA MER1_type -16 181 32 920 222 70 25 chr5 149668419 149668662 -49961488 + MIR SINE MIR 8 261 -1 332 244 111 11 chr5 149668808 149668898 -49961252 - L2 LINE L2 0 3313 3215 273 130 0 0 chr5 149669730 149669776 -49960374 + Alu SINE Alu 241 286 -15 * 1563 168 51 17 chr5 149669772 149670124 -49960026 - Tigger2 DNA MER2_type -225 2493 2130 1608 153 0 17 chr5 149670241 149670482 -49959668 - AluSx SINE Alu -75 237 1 377 228 0 0 chr5 149670483 149670562 -49959588 - L1ME2 LINE L1 -312 5852 5774 792 240 18 9 chr5 149670563 149670788 -49959362 - L1ME2 LINE L1 -1842 4304 4078 453 208 0 0 chr5 149670784 149670890 -49959260 - L1ME LINE L1 -394 5770 5665 * 1124 133 77 10 chr5 149671207 149671403 -49958747 - MER46A DNA MER2_type -2 234 26 319 268 21 21 chr5 149671421 149671518 -49958632 - MIR SINE MIR -116 146 50 879 209 31 0 chr5 149671523 149671714 -49958436 + Tigger3(Golem) DNA MER2_type 8 204 -2825 1556 124 100 8 chr5 149671829 149672088 -49958062 + AluSx SINE Alu 25 307 -5 1365 237 94 34 chr5 149672095 149672778 -49957372 + L1ME2 LINE L1 4478 5201 -945 288 0 0 0 chr5 149673037 149673069 -49957081 + (A)n Simple_repeat Simple_repeat 1 32 0 28 0 0 0 chr5 149673159 149673187 -49956963 + AT_rich Low_complexity Low_complexity 1 28 0 342 211 0 0 chr5 149674029 149674100 -49956050 + AluS SINE Alu 230 300 -2 661 212 152 30 chr5 149674107 149674371 -49955779 + L1ME2 LINE L1 5861 6156 -8 22 35 0 0 chr5 149675128 149675157 -49954993 + AT_rich Low_complexity Low_complexity 1 29 0 765 201 181 12 chr5 149675566 149675825 -49954325 + L1P LINE L1 3527 3829 -2317 249 172 69 0 chr5 149678171 149678229 -49951921 + MLT1H1 LTR MaLR 463 524 -31 400 132 0 15 chr5 149678231 149678299 -49951851 + Tigger2 DNA MER2_type 3 69 -2649 * 2155 144 11 52 chr5 149678282 149678746 -49951404 + Tigger2 DNA MER2_type 2267 2711 -7 321 93 0 0 chr5 149679387 149679441 -49950709 + AluSp/q SINE Alu 250 303 0 217 318 132 16 chr5 149680293 149680422 -49949728 + MIR SINE MIR 108 251 -11 381 139 13 0 chr5 149681744 149681823 -49948327 + L1PB2 LINE L1 6072 6151 0 30 27 0 0 chr5 149681929 149681966 -49948184 + AT_rich Low_complexity Low_complexity 1 37 0 1387 154 42 12 chr5 149681966 149682225 -49947925 - L1PA10 LINE L1 -6 6162 5896 5141 120 17 2 chr5 149683535 149684450 -49945700 + L1PB2 LINE L1 5150 6074 -77 209 231 0 0 chr5 149684610 149684649 -49945501 + A-rich Low_complexity Low_complexity 2 40 0 2321 96 0 0 chr5 149684808 149685100 -49945050 - AluY SINE Alu -19 292 1 416 35 17 0 chr5 149685155 149685213 -49944937 + (TG)n Simple_repeat Simple_repeat 1 59 0 360 0 0 0 chr5 149685884 149685924 -49944226 + (TG)n Simple_repeat Simple_repeat 2 41 0 1427 179 64 50 chr5 149685925 149686205 -49943945 - AluJo SINE Alu -25 287 4 544 253 139 37 chr5 149687197 149687442 -49942708 - L2 LINE L2 -21 3292 3023 2453 57 0 32 chr5 149688267 149688581 -49941569 + AluSx SINE Alu 1 304 -8 1242 76 0 0 chr5 149688583 149688740 -49941410 + AluSg/x SINE Alu 139 295 -17 2312 98 0 0 chr5 149688740 149689035 -49941115 + AluSx SINE Alu 1 295 -17 252 181 0 101 chr5 149689589 149689738 -49940412 - AluY SINE Alu -163 138 5 211 356 53 0 chr5 149690402 149690534 -49939616 + MIR SINE MIR 92 230 -32 279 0 0 0 chr5 149691189 149691220 -49938930 + (CA)n Simple_repeat Simple_repeat 2 32 0 1521 193 17 17 chr5 149691300 149691600 -49938550 + AluJb SINE Alu 1 300 -12 814 172 33 0 chr5 149692111 149692291 -49937859 + L1M4 LINE L1 5594 5779 -405 2298 83 7 7 chr5 149692291 149692592 -49937558 + AluSp SINE Alu 1 301 -12 211 157 20 59 chr5 149692609 149692660 -49937490 + MIR SINE MIR 109 157 -105 328 68 0 0 chr5 149692804 149692848 -49937302 - L1P LINE L1 -3586 2560 2517 9969 99 2 0 chr5 149692848 149695047 -49935103 + L1PA6 LINE L1 3935 6141 -13 512 235 75 75 chr5 149695061 149695423 -49934727 + L1M4 LINE L1 4416 4777 -1369 * 958 229 4 0 chr5 149695420 149695673 -49934477 - L1P LINE L1 -872 5274 5021 241 149 0 21 chr5 149695983 149696030 -49934120 - MIR SINE MIR -40 222 177 * 1014 301 124 22 chr5 149696028 149696763 -49933387 - L2 LINE L2 0 3313 2503 329 211 44 18 chr5 149696845 149696959 -49933191 + (TCTA)n Simple_repeat Simple_repeat 2 118 0 445 333 85 0 chr5 149698328 149698517 -49931633 + MIR SINE MIR 3 207 -55 458 161 69 0 chr5 149748771 149748858 -49881292 - AluJo SINE Alu -176 136 44 2225 131 0 0 chr5 149748865 149749177 -49880973 - AluSx SINE Alu 0 312 1 1184 225 92 48 chr5 149749474 149749928 -49880222 - L1ME3A LINE L1 0 6170 5697 872 201 0 0 chr5 149749930 149750074 -49880076 - FRAM SINE Alu -34 142 1 1261 163 175 0 chr5 149750080 149750332 -49879818 - AluJb SINE Alu -16 296 1 275 289 13 0 chr5 149750787 149750863 -49879287 - HAL1 LINE L1 -937 1570 1494 1450 93 0 0 chr5 149750895 149751077 -49879073 - AluSg/x SINE Alu -2 308 127 887 169 11 48 chr5 149751195 149751384 -49878766 + MER3 DNA MER1_type 1 182 -27 1239 167 14 14 chr5 149751406 149751621 -49878529 + AluJb SINE Alu 66 280 -32 2037 135 3 3 chr5 149751699 149751987 -49878163 + AluSx SINE Alu 1 288 -24 24 32 0 0 chr5 149751990 149752021 -49878129 + AT_rich Low_complexity Low_complexity 1 31 0 283 212 212 25 chr5 149752059 149752177 -49877973 + L1ME LINE L1 5529 5668 -453 27 0 0 0 chr5 149752311 149752338 -49877812 + AT_rich Low_complexity Low_complexity 1 27 0 2567 53 3 0 chr5 149752662 149752966 -49877184 - AluY SINE Alu -6 305 1 248 208 97 28 chr5 149753141 149753213 -49876937 + L1ME LINE L1 5543 5619 -502 1766 165 0 7 chr5 149754936 149755215 -49874935 + AluJb SINE Alu 10 286 -26 340 284 169 18 chr5 149755223 149755448 -49874702 + MIR SINE MIR 3 261 -1 1990 147 13 0 chr5 149755630 149755936 -49874214 + AluSx SINE Alu 1 310 -2 2165 117 10 0 chr5 149756291 149756589 -49873561 + AluSx SINE Alu 1 301 -11 328 153 0 0 chr5 149756747 149756806 -49873344 - Alu SINE Alu -1 299 241 2400 73 0 0 chr5 149756906 149757193 -49872957 - AluSx SINE Alu -23 289 3 602 281 127 42 chr5 149757329 149758186 -49871964 - L1MC4a LINE L1 -748 5398 5153 2204 90 17 3 chr5 149758213 149758503 -49871647 - AluSp SINE Alu -19 294 1 2288 108 7 0 chr5 149758868 149759173 -49870977 - AluSg SINE Alu -1 309 3 1716 159 16 29 chr5 149759413 149759589 -49870561 - AluSx SINE Alu -2 310 138 2025 141 26 7 chr5 149759589 149759894 -49870256 - AluSx SINE Alu -1 311 1 1716 159 16 29 chr5 149759894 149760031 -49870119 - AluSx SINE Alu -174 138 1 971 133 7 0 chr5 149760041 149760184 -49869966 - AluSp/q SINE Alu 0 313 170 1241 186 73 92 chr5 149760191 149760340 -49869810 - L1M4 LINE L1 -820 5824 5674 1477 182 35 11 chr5 149760340 149760626 -49869524 - AluJo SINE Alu -19 293 1 2396 65 3 16 chr5 149760627 149760934 -49869216 - AluY SINE Alu -8 303 1 1241 186 73 92 chr5 149760934 149761206 -49868944 - L1M4 LINE L1 -969 5675 5409 1315 105 15 5 chr5 149761209 149761409 -49868741 - MER47A DNA MER2_type 0 366 165 690 219 8 0 chr5 149761442 149761570 -49868580 + FLAM_C SINE Alu 2 130 -3 1323 153 47 17 chr5 149761592 149761828 -49868322 + AluJo SINE Alu 54 296 -16 433 202 115 10 chr5 149761830 149761934 -49868216 - MER47A DNA MER2_type -248 118 4 1233 236 58 7 chr5 149761935 149762245 -49867905 - L1M4 LINE L1 -1239 5405 5080 515 154 0 87 chr5 149762246 149762395 -49867755 - FLAM_C SINE Alu -3 140 5 293 75 0 4 chr5 149762514 149762560 -49867590 - Alu SINE Alu -263 37 1 363 169 0 13 chr5 149762664 149762741 -49867409 - L1MEd LINE L1 -4914 1720 1543 2176 99 13 13 chr5 149762741 149763045 -49867105 - AluSg SINE Alu -6 304 1 2425 82 7 0 chr5 149763045 149763348 -49866802 - AluSg SINE Alu -5 305 1 1528 176 68 0 chr5 149763597 149763875 -49866275 + AluJo SINE Alu 1 297 -15 342 180 0 0 chr5 149764474 149764535 -49865615 + L2 LINE L2 3253 3313 0 340 301 40 1 chr5 149765344 149765462 -49864688 - MIR SINE MIR -46 162 40 566 167 83 0 chr5 149766327 149766435 -49863715 - MER20 DNA MER1_type -45 174 58 226 107 268 0 chr5 149766483 149766539 -49863611 - MER20 DNA MER1_type -148 71 1 235 340 62 10 chr5 149767010 149767107 -49863043 - MER91B DNA MER1_type 0 190 89 449 213 9 28 chr5 149767118 149767226 -49862924 - MER91B DNA MER1_type -60 130 25 1882 157 6 6 chr5 149768022 149768334 -49861816 + AluJb SINE Alu 1 312 0 316 227 268 0 chr5 149768965 149769062 -49861088 + L2 LINE L2 3191 3313 0 249 238 0 50 chr5 149770174 149770275 -49859875 + (CCCCG)n Simple_repeat Simple_repeat 2 97 0 2140 105 20 0 chr5 149771654 149771948 -49858202 - AluSx SINE Alu -12 300 1 1961 134 10 0 chr5 149772307 149772597 -49857553 - AluSx SINE Alu -14 298 6 319 68 0 136 chr5 149772620 149772679 -49857471 - AluSp/q SINE Alu -9 294 244 1852 143 7 7 chr5 149772820 149773107 -49857043 + AluJo SINE Alu 14 300 -12 240 297 58 23 chr5 149774049 149774215 -49855935 + MIR3 SINE MIR 8 185 -58 2154 105 0 10 chr5 149774318 149774622 -49855528 - AluSx SINE Alu -11 301 1 968 136 0 0 chr5 149774625 149774757 -49855393 - AluSq/x SINE Alu -180 132 1 1772 138 123 21 chr5 149775310 149775650 -49854500 - THE1C LTR MaLR 0 375 1 778 199 62 0 chr5 149776225 149776371 -49853779 - FRAM SINE Alu -23 153 1 432 0 0 0 chr5 149776371 149776419 -49853731 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 2098 118 7 0 chr5 149776419 149776699 -49853451 - AluSx SINE Alu -30 282 1 2044 135 0 10 chr5 149776701 149777013 -49853137 - AluJb SINE Alu -3 309 1 442 220 141 25 chr5 149777023 149777165 -49852985 - L1ME1 LINE L1 0 6334 6024 648 191 0 34 chr5 149777165 149777312 -49852838 + MIR SINE MIR 121 262 0 1226 194 4 0 chr5 149777448 149777696 -49852454 - L1 LINE L1 -1375 4771 4523 952 166 51 0 chr5 149777885 149778042 -49852108 + FRAM SINE Alu 1 165 -1 213 39 0 0 chr5 149778042 149778068 -49852082 + (TA)n Simple_repeat Simple_repeat 2 27 0 1948 128 54 10 chr5 149778199 149778495 -49851655 + AluSx SINE Alu 1 309 -3 339 25 0 0 chr5 149778504 149778544 -49851606 + (TC)n Simple_repeat Simple_repeat 2 41 0 180 111 0 0 chr5 149778750 149778777 -49851373 + (T)n Simple_repeat Simple_repeat 1 27 0 1435 204 103 32 chr5 149778803 149779239 -49850911 - MLT1C LTR MaLR 0 467 1 1623 137 107 19 chr5 149779497 149779768 -49850382 + AluJb SINE Alu 1 295 -17 371 243 262 20 chr5 149779840 149780042 -49850108 + MIR SINE MIR 6 256 -6 1693 143 86 4 chr5 149780251 149780531 -49849619 + AluJo SINE Alu 1 303 -9 1353 141 34 0 chr5 149780769 149781003 -49849147 - AluSx SINE Alu -70 242 1 821 185 0 0 chr5 149781046 149781181 -49848969 + AluJo SINE Alu 1 135 -177 216 0 0 0 chr5 149781680 149781704 -49848446 + (A)n Simple_repeat Simple_repeat 1 24 0 247 333 19 0 chr5 149781950 149782055 -49848095 + MIR SINE MIR 81 187 -75 2471 57 7 3 chr5 149782140 149782440 -49847710 - AluY SINE Alu -10 301 1 26 30 0 0 chr5 149782449 149782482 -49847668 + AT_rich Low_complexity Low_complexity 1 33 0 201 74 0 0 chr5 149782934 149782961 -49847189 + (T)n Simple_repeat Simple_repeat 1 27 0 1944 146 3 0 chr5 149783654 149783942 -49846208 + AluSx SINE Alu 11 299 -13 2499 77 0 0 chr5 149783942 149784240 -49845910 + AluY SINE Alu 1 298 -13 1684 166 28 14 chr5 149784670 149784959 -49845191 - AluJb SINE Alu -19 293 1 391 187 0 130 chr5 149784959 149785016 -49845134 + L2 LINE L2 3207 3241 -72 1697 151 154 0 chr5 149785016 149785308 -49844842 + MER1B DNA MER1_type 1 337 0 391 187 0 130 chr5 149785308 149785373 -49844777 + L2 LINE L2 3241 3313 0 578 179 134 8 chr5 149785826 149785960 -49844190 + MER20 DNA MER1_type 68 218 -1 21 36 0 0 chr5 149786110 149786138 -49844012 + AT_rich Low_complexity Low_complexity 1 28 0 2178 137 0 0 chr5 149786142 149786448 -49843702 + AluSx SINE Alu 1 306 -6 1693 147 6 86 chr5 149787046 149787360 -49842790 + AluJo SINE Alu 1 289 -23 21 0 0 0 chr5 149787475 149787496 -49842654 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 149789582 149789606 -49840544 + AT_rich Low_complexity Low_complexity 1 24 0 2475 57 3 3 chr5 149790404 149790700 -49839450 - AluY SINE Alu -15 296 1 2103 121 7 0 chr5 149790783 149791080 -49839070 - AluSq SINE Alu -14 299 1 1982 148 16 3 chr5 149792713 149793016 -49837134 + AluJb SINE Alu 1 307 -5 315 65 0 0 chr5 149793732 149793778 -49836372 + (A)n Simple_repeat Simple_repeat 1 46 0 29 0 0 0 chr5 149794251 149794280 -49835870 + AT_rich Low_complexity Low_complexity 1 29 0 2276 108 0 0 chr5 149794280 149794566 -49835584 - AluSg SINE Alu -24 286 1 2241 86 14 7 chr5 149794925 149795217 -49834933 + AluSg SINE Alu 1 294 -16 2258 92 7 7 chr5 149795227 149795522 -49834628 + AluSg SINE Alu 1 295 -15 2047 122 3 14 chr5 149795532 149795827 -49834323 + AluSx SINE Alu 1 292 -20 882 118 0 16 chr5 149795885 149796012 -49834138 + FLAM_C SINE Alu 1 125 -18 293 296 72 40 chr5 149796212 149796337 -49833813 + MIR3 SINE MIR 37 165 -43 280 240 67 0 chr5 149796699 149796774 -49833376 - MER39 LTR ERV1 -1 706 627 187 198 23 139 chr5 149796844 149796899 -49833251 + MIR SINE MIR 161 204 -58 2264 101 3 0 chr5 149796899 149797196 -49832954 + AluSp SINE Alu 1 298 -15 187 198 23 139 chr5 149797196 149797226 -49832924 + MIR SINE MIR 204 236 -26 793 245 5 19 chr5 149797310 149797518 -49832632 - MIR SINE MIR 0 262 58 2640 62 0 0 chr5 149798237 149798544 -49831606 - AluY SINE Alu -4 307 1 211 282 91 36 chr5 149799079 149799223 -49830927 - MIR SINE MIR -61 147 4 1812 157 7 0 chr5 149799561 149799848 -49830302 - AluJb SINE Alu -23 289 1 317 309 17 62 chr5 149800155 149800333 -49829817 - MER5B DNA MER1_type -6 172 3 239 300 0 0 chr5 149801108 149801168 -49828982 - MIR SINE MIR -111 97 38 1218 174 0 5 chr5 149801513 149801708 -49828442 + AluJo SINE Alu 85 278 -34 458 70 14 0 chr5 149801714 149801785 -49828365 + (TAAA)n Simple_repeat Simple_repeat 2 73 0 356 280 112 0 chr5 149802667 149802810 -49827340 + L1ME4a LINE L1 5769 5927 -194 648 131 0 9 chr5 149804142 149804249 -49825901 + FLAM_C SINE Alu 38 143 0 2147 129 0 7 chr5 149804269 149804571 -49825579 + AluJb SINE Alu 1 300 -12 252 143 0 0 chr5 149804581 149804623 -49825527 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 310 301 138 25 chr5 149804849 149805052 -49825098 - MIR SINE MIR -17 245 20 1910 155 3 23 chr5 149806567 149806876 -49823274 - AluJb SINE Alu -9 303 1 185 105 0 53 chr5 149807497 149807535 -49822615 + (TTTCC)n Simple_repeat Simple_repeat 3 38 0 2304 99 3 0 chr5 149807539 149807842 -49822308 - AluSp SINE Alu -9 304 1 2043 108 45 0 chr5 149808000 149808287 -49821863 + AluSx SINE Alu 1 300 -12 368 97 0 16 chr5 149808422 149808484 -49821666 + Alu SINE Alu 237 297 -3 834 250 128 50 chr5 149808578 149809167 -49820983 + L1ME3A LINE L1 5179 5837 -333 1954 166 3 0 chr5 149809167 149809469 -49820681 + AluJb SINE Alu 1 303 -9 834 250 128 50 chr5 149809469 149809596 -49820554 + L1ME3A LINE L1 5837 5953 -217 1455 115 213 8 chr5 149809632 149809876 -49820274 + AluSg1 SINE Alu 1 294 -15 2163 124 51 25 chr5 149809888 149810243 -49819907 + THE1B LTR MaLR 1 364 0 259 267 47 73 chr5 149810273 149810464 -49819686 + L1ME3A LINE L1 5962 6147 -23 2460 94 0 0 chr5 149810651 149810959 -49819191 - AluSg1 SINE Alu -1 308 1 1464 188 61 89 chr5 149811101 149811140 -49819010 + MLT1D LTR MaLR 5 44 -461 2205 109 0 3 chr5 149811140 149811433 -49818717 + AluSc SINE Alu 1 292 -17 1464 188 61 89 chr5 149811433 149811855 -49818295 + MLT1D LTR MaLR 44 453 -52 417 160 181 0 chr5 149811861 149811955 -49818195 - L1MD3 LINE L1 -2 7993 7883 212 0 36 0 chr5 149811970 149811998 -49818152 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 465 108 54 0 chr5 149812021 149812095 -49818055 - L1MC1 LINE L1 -20 6313 6236 322 130 26 117 chr5 149812095 149812172 -49817978 + MLT1D LTR MaLR 557 626 0 212 310 35 0 chr5 149812343 149812401 -49817749 - MER91A DNA MER1_type -9 187 128 2187 125 7 0 chr5 149812846 149813151 -49816999 - AluSx SINE Alu -5 307 1 2140 122 3 6 chr5 149813171 149813482 -49816668 - AluSq SINE Alu -3 310 1 1632 177 0 45 chr5 149813753 149814063 -49816087 + AluJo SINE Alu 1 296 -16 2178 109 3 0 chr5 149814066 149814384 -49815766 + AluSp SINE Alu 1 319 0 521 286 178 35 chr5 149815156 149815526 -49814624 - L1MC/D LINE L1 -2071 5737 5315 24 0 0 0 chr5 149816095 149816119 -49814031 + AT_rich Low_complexity Low_complexity 1 24 0 2303 58 20 14 chr5 149816197 149816491 -49813659 + AluY SINE Alu 1 296 -15 1910 158 0 10 chr5 149816563 149816854 -49813296 + AluJb SINE Alu 1 288 -24 2213 107 3 3 chr5 149816864 149817155 -49812995 + AluSq SINE Alu 1 291 -22 349 221 23 12 chr5 149817336 149817422 -49812728 + L1MC5 LINE L1 7827 7913 -48 733 109 70 39 chr5 149817426 149817554 -49812596 + FLAM_C SINE Alu 2 133 0 1967 148 0 14 chr5 149820021 149820318 -49809832 + AluJo SINE Alu 4 296 -16 1658 112 0 13 chr5 149820634 149820866 -49809284 - AluSq SINE Alu -16 297 69 2490 63 0 7 chr5 149820871 149821173 -49808977 - AluY SINE Alu -11 300 1 3399 153 33 31 chr5 149821195 149821309 -49808841 - MER6A DNA MER2_type -260 605 493 1845 156 28 0 chr5 149821309 149821598 -49808552 + AluJb SINE Alu 1 297 -15 3399 153 33 31 chr5 149821598 149821691 -49808459 - MER6A DNA MER2_type -372 493 402 2135 102 61 0 chr5 149821691 149821985 -49808165 + AluSx SINE Alu 1 312 0 3399 153 33 31 chr5 149821985 149822379 -49807771 - MER6A DNA MER2_type -463 402 2 2425 96 0 0 chr5 149822434 149822735 -49807415 + AluSg SINE Alu 1 301 -9 1959 101 4 0 chr5 149822971 149823238 -49806912 + AluSp SINE Alu 1 268 -45 336 0 0 0 chr5 149823369 149823404 -49806746 + U2 snRNA snRNA 1 35 -153 1205 167 35 0 chr5 149823404 149823602 -49806548 + MER84 LTR ERVI 2 206 -301 1205 116 39 60 chr5 149823592 149823705 -49806445 + MER84 LTR ERVI 281 388 -119 2316 63 0 16 chr5 149823705 149824021 -49806129 - AluY SINE Alu 0 311 1 1205 116 39 60 chr5 149824021 149824139 -49806011 + MER84 LTR ERVI 388 507 0 309 283 198 0 chr5 149824139 149824245 -49805905 - MIR SINE MIR -115 147 21 2202 79 3 3 chr5 149824442 149824747 -49805403 - AluSx SINE Alu -6 306 2 295 278 191 24 chr5 149825144 149825270 -49804880 - MIR3 SINE MIR -22 186 40 550 187 33 0 chr5 149825462 149825553 -49804597 - U6 snRNA snRNA -13 94 1 1081 75 0 0 chr5 149825992 149826125 -49804025 + AluSp SINE Alu 1 133 -180 6261 70 23 34 chr5 149826147 149827435 -49802715 + SVA Other Other 432 1381 -5 1352 78 0 6 chr5 149827443 149827622 -49802528 + AluSp SINE Alu 121 298 -15 227 362 95 0 chr5 149827895 149828011 -49802139 + L2 LINE L2 3175 3301 -12 2147 112 0 0 chr5 149828011 149828327 -49801823 + AluSq SINE Alu 1 316 0 826 152 19 11 chr5 149828336 149828518 -49801632 - L1MC/D LINE L1 -749 5431 5259 370 336 31 12 chr5 149828496 149828755 -49801395 + L1MC/D LINE L1 3581 3844 -2302 * 452 285 61 16 chr5 149828826 149829072 -49801078 + L1MC/D LINE L1 4447 4703 -1443 1890 124 23 7 chr5 149829158 149829457 -49800693 - AluSg SINE Alu -6 304 1 1933 133 0 20 chr5 149829473 149829773 -49800377 - AluSx SINE Alu -17 295 2 32 26 0 0 chr5 149829878 149829917 -49800233 + AT_rich Low_complexity Low_complexity 1 39 0 2314 95 0 0 chr5 149829931 149830235 -49799915 + AluSg SINE Alu 1 304 -6 819 145 0 0 chr5 149830236 149830353 -49799797 - AluJo/FLAM SINE Alu -193 119 3 372 307 88 68 chr5 149830369 149830688 -49799462 + L1MC/D LINE L1 4877 5205 -941 1551 197 38 0 chr5 149830688 149830977 -49799173 + AluJo SINE Alu 1 300 -12 372 307 88 68 chr5 149830977 149831022 -49799128 + L1MC/D LINE L1 5205 5248 -898 290 238 72 38 chr5 149831040 149831205 -49798945 + L1MC/D LINE L1 5283 5456 -870 1158 246 110 60 chr5 149831227 149831582 -49798568 + HAL1 LINE L1 652 1043 -1464 2175 125 0 0 chr5 149831582 149831894 -49798256 + AluSx SINE Alu 1 312 0 1158 246 110 60 chr5 149831894 149832055 -49798095 + HAL1 LINE L1 1043 1194 -1313 326 205 0 0 chr5 149832063 149832141 -49798009 + HAL1 LINE L1 1149 1226 -1281 1999 115 0 3 chr5 149832196 149832482 -49797668 + AluSx SINE Alu 1 285 -27 210 169 17 34 chr5 149832487 149832515 -49797635 + (TA)n Simple_repeat Simple_repeat 2 29 -30 810 181 0 0 chr5 149832515 149832642 -49797508 + FLAM_A SINE Alu 5 131 -2 210 169 17 34 chr5 149832642 149832672 -49797478 + (TA)n Simple_repeat Simple_repeat 29 59 0 2089 109 3 3 chr5 149832805 149833098 -49797052 - AluSg SINE Alu -17 293 1 482 276 10 0 chr5 149834648 149834746 -49795404 - MER81 DNA DNA -2 112 14 225 264 59 36 chr5 149834746 149834866 -49795284 + MIR SINE MIR 49 175 -33 191 294 39 0 chr5 149834971 149835022 -49795128 - MIR3 SINE MIR -2 206 154 220 175 0 25 chr5 149835102 149835142 -49795008 + L2 LINE L2 3179 3217 -96 1507 153 71 140 chr5 149835252 149835717 -49794433 - MER63B DNA MER1_type 0 436 4 1976 123 13 3 chr5 149836118 149836418 -49793732 + AluSx SINE Alu 1 303 -9 225 0 0 0 chr5 149836522 149836547 -49793603 + (T)n Simple_repeat Simple_repeat 1 25 0 904 94 0 0 chr5 149836547 149836664 -49793486 - AluSp SINE Alu -174 139 23 869 205 0 0 chr5 149836687 149836843 -49793307 - FRAM SINE Alu -20 156 1 365 202 17 126 chr5 149836845 149836964 -49793186 - MIR3 SINE MIR -25 183 78 2184 52 52 0 chr5 149837039 149837326 -49792824 + AluY SINE Alu 2 303 -8 675 234 133 0 chr5 149837827 149838015 -49792135 - MER5C DNA MER1_type -105 219 7 1841 144 7 3 chr5 149838374 149838672 -49791478 + AluSq SINE Alu 1 299 -14 2156 96 3 0 chr5 149838675 149839012 -49791138 + AluSc SINE Alu 1 309 0 2016 125 3 7 chr5 149839077 149839381 -49790769 + AluSx SINE Alu 1 303 -9 189 233 50 33 chr5 149839728 149839788 -49790362 - MIR SINE MIR -61 147 87 318 232 0 0 chr5 149840838 149840907 -49789243 + MIR SINE MIR 67 135 -127 2267 84 10 3 chr5 149841011 149841310 -49788840 - AluSx SINE Alu -10 302 2 1793 134 3 21 chr5 149841663 149841953 -49788197 + AluJo SINE Alu 21 305 -7 1726 167 0 0 chr5 149842284 149842572 -49787578 - AluJb SINE Alu -1 311 24 827 133 47 0 chr5 149842698 149842826 -49787324 + AluJo SINE Alu 1 134 -178 1863 143 0 34 chr5 149842830 149843151 -49786999 + AluSx SINE Alu 1 310 -2 2131 91 34 0 chr5 149843153 149843449 -49786701 + AluSx SINE Alu 1 306 -6 2139 98 19 13 chr5 149843450 149843757 -49786393 + AluSc SINE Alu 1 309 0 2471 57 0 0 chr5 149844435 149844732 -49785418 - AluY SINE Alu -14 297 1 257 292 69 69 chr5 149845267 149845411 -49784739 - MIR3 SINE MIR -61 147 4 1730 163 0 0 chr5 149845749 149846038 -49784112 - AluJb SINE Alu -23 289 1 380 309 17 62 chr5 149846345 149846523 -49783627 - MER5B DNA MER1_type -6 172 3 252 262 29 97 chr5 149847299 149847402 -49782748 - MIR3 SINE MIR -111 97 2 1141 174 0 5 chr5 149847704 149847899 -49782251 + AluJo SINE Alu 85 278 -34 425 84 14 0 chr5 149847905 149847976 -49782174 + (TAAA)n Simple_repeat Simple_repeat 2 73 0 349 280 112 0 chr5 149848858 149849001 -49781149 + L1ME4a LINE L1 5769 5927 -194 650 131 0 9 chr5 149850331 149850438 -49779712 + FLAM_C SINE Alu 38 143 0 2030 129 0 7 chr5 149850457 149850760 -49779390 + AluJb SINE Alu 1 301 -11 252 143 0 0 chr5 149850770 149850812 -49779338 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 390 289 123 39 chr5 149851038 149851255 -49778895 - MIR SINE MIR -17 245 8 1794 155 3 23 chr5 149852756 149853065 -49777085 - AluJb SINE Alu -9 303 1 185 105 0 53 chr5 149853686 149853724 -49776426 + (TTTCC)n Simple_repeat Simple_repeat 3 38 0 2179 99 3 0 chr5 149853728 149854031 -49776119 - AluSp SINE Alu -9 304 1 1021 156 0 16 chr5 149854177 149854189 -49775961 + AluSg/x SINE Alu 119 130 -180 1995 104 42 0 chr5 149854189 149854477 -49775673 + AluSx SINE Alu 1 300 -12 1021 156 0 16 chr5 149854477 149854677 -49775473 + AluSg/x SINE Alu 130 310 0 1800 150 13 38 chr5 149854687 149854831 -49775319 + AluJo SINE Alu 1 147 -165 2188 97 0 3 chr5 149854831 149855131 -49775019 + AluSg1 SINE Alu 1 299 -10 1800 150 13 38 chr5 149855131 149855300 -49774850 + AluJo SINE Alu 147 306 -6 2127 113 3 16 chr5 149855430 149855741 -49774409 - AluSq SINE Alu -6 307 1 22 0 0 0 chr5 149856465 149856487 -49773663 + AT_rich Low_complexity Low_complexity 1 22 0 2067 97 0 10 chr5 149856487 149856777 -49773373 - AluSg SINE Alu -23 287 1 1219 198 12 27 chr5 149856842 149857100 -49773050 + AluSx SINE Alu 33 286 -26 935 294 46 82 chr5 149857129 149857305 -49772845 - L2 LINE L2 -612 2702 2521 2140 106 0 3 chr5 149857305 149857597 -49772553 + AluSg SINE Alu 1 291 -19 935 294 46 82 chr5 149857597 149857787 -49772363 - L2 LINE L2 -793 2521 2362 1958 127 7 20 chr5 149857787 149858086 -49772064 + AluSx SINE Alu 1 295 -17 935 294 46 82 chr5 149858086 149858307 -49771843 - L2 LINE L2 -952 2362 2135 192 212 81 111 chr5 149858468 149858567 -49771583 - L2 LINE L2 -20 3252 3157 1289 144 10 0 chr5 149858591 149858793 -49771357 + AluJo SINE Alu 85 288 -24 22 0 0 0 chr5 149859755 149859777 -49770373 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr5 149860283 149860312 -49769838 + AT_rich Low_complexity Low_complexity 1 29 0 2109 115 0 0 chr5 149860312 149860598 -49769552 - AluSg SINE Alu -24 286 1 2113 86 14 7 chr5 149860957 149861249 -49768901 + AluSg SINE Alu 1 294 -16 2104 95 7 7 chr5 149861259 149861554 -49768596 + AluSg SINE Alu 1 295 -15 1923 122 3 14 chr5 149861564 149861859 -49768291 + AluSx SINE Alu 1 292 -20 827 118 0 16 chr5 149861917 149862044 -49768106 + FLAM_C SINE Alu 1 125 -18 336 281 76 47 chr5 149862217 149862373 -49767777 + MIR3 SINE MIR 7 169 -39 240 243 81 0 chr5 149862731 149862805 -49767345 - MER39 LTR ERV1 -1 706 627 215 210 20 140 chr5 149862861 149862930 -49767220 + MIR SINE MIR 149 204 -58 2137 101 3 0 chr5 149862930 149863227 -49766923 + AluSp SINE Alu 1 298 -15 215 210 20 140 chr5 149863227 149863257 -49766893 + MIR SINE MIR 204 236 -26 884 245 5 19 chr5 149863341 149863549 -49766601 - MIR SINE MIR 0 262 58 1402 63 0 5 chr5 149864269 149864459 -49765691 - AluY SINE Alu -4 307 119 2491 58 0 0 chr5 149864468 149864778 -49765372 - AluY SINE Alu -1 310 1 2098 106 0 26 chr5 149864805 149865107 -49765043 + AluSx SINE Alu 1 294 -18 21 36 0 0 chr5 149865522 149865550 -49764600 + AT_rich Low_complexity Low_complexity 1 28 0 502 273 0 0 chr5 149866361 149866493 -49763657 - L1M4 LINE L1 -2708 3438 3307 1727 164 10 16 chr5 149867369 149867674 -49762476 + AluJo SINE Alu 1 303 -9 1912 159 0 0 chr5 149868515 149868824 -49761326 - AluJb SINE Alu -3 309 1 481 167 20 0 chr5 149868911 149869013 -49761137 + CT-rich Low_complexity Low_complexity 1 104 0 2239 86 0 3 chr5 149869013 149869316 -49760834 - AluSg SINE Alu -8 302 1 1565 172 0 0 chr5 149869349 149869605 -49760545 - AluJb SINE Alu -54 258 3 25 51 0 0 chr5 149869767 149869806 -49760344 + AT_rich Low_complexity Low_complexity 1 39 0 2388 43 0 13 chr5 149870024 149870327 -49759823 - AluY SINE Alu -12 299 1 460 278 60 94 chr5 149870347 149870536 -49759614 - L1ME4a LINE L1 -2 6119 5942 868 148 0 15 chr5 149870536 149870671 -49759479 + FLAM_C SINE Alu 1 133 0 460 278 60 94 chr5 149870671 149870780 -49759370 - L1ME4a LINE L1 -179 5942 5831 2449 55 3 0 chr5 149870782 149871090 -49759060 - AluY SINE Alu -2 309 1 406 138 0 15 chr5 149871090 149871155 -49758995 + MADE1 DNA Mariner 17 80 0 406 250 10 0 chr5 149871261 149871361 -49758789 - U13 snRNA snRNA -2 102 2 4673 186 32 59 chr5 149871988 149872630 -49757520 + L1M4 LINE L1 4171 4829 -1355 652 149 9 19 chr5 149872630 149872737 -49757413 + U6 snRNA snRNA 1 106 -1 4673 186 32 59 chr5 149872737 149872992 -49757158 + L1M4 LINE L1 4829 5090 -1094 1616 177 13 3 chr5 149872992 149873292 -49756858 + AluJb SINE Alu 10 312 0 4673 186 32 59 chr5 149873292 149873757 -49756393 + L1M4 LINE L1 5090 5488 -696 2386 93 0 3 chr5 149873757 149874068 -49756082 + AluSx SINE Alu 1 310 -2 2499 65 0 0 chr5 149874190 149874481 -49755669 - AluY SINE Alu -20 291 1 2414 70 7 0 chr5 149874550 149874836 -49755314 - AluSg SINE Alu -20 290 3 1950 157 10 16 chr5 149875076 149875250 -49754900 - AluSx SINE Alu -2 310 137 2047 145 26 0 chr5 149875250 149875554 -49754596 - AluSx SINE Alu 0 312 1 1950 157 10 16 chr5 149875554 149875691 -49754459 - AluSx SINE Alu -175 137 1 971 133 7 0 chr5 149875700 149875843 -49754307 - AluSp/q SINE Alu 0 313 170 1247 187 73 90 chr5 149875850 149875999 -49754151 - L1M4 LINE L1 -820 5326 5176 1475 183 35 11 chr5 149875999 149876284 -49753866 - AluJo SINE Alu -18 294 3 2396 65 3 16 chr5 149876284 149876591 -49753559 - AluY SINE Alu -8 303 1 1247 187 73 90 chr5 149876591 149876863 -49753287 - L1M4 LINE L1 -968 5178 4911 1315 105 15 5 chr5 149876866 149877066 -49753084 - MER47A DNA MER2_type 0 366 165 690 219 8 0 chr5 149877099 149877227 -49752923 + FLAM_C SINE Alu 2 130 -3 1323 153 47 17 chr5 149877249 149877485 -49752665 + AluJo SINE Alu 54 296 -16 433 202 115 10 chr5 149877487 149877591 -49752559 - MER47A DNA MER2_type -248 118 4 1233 236 58 7 chr5 149877592 149877902 -49752248 - L1M4 LINE L1 -1239 4907 4582 836 168 0 21 chr5 149877903 149878046 -49752104 - FLAM_C SINE Alu -3 140 1 679 163 42 70 chr5 149878057 149878210 -49751940 - L1M4 LINE L1 -1572 4574 4418 2585 70 0 3 chr5 149878210 149878522 -49751628 + AluSq SINE Alu 1 311 -2 679 163 42 70 chr5 149878522 149878573 -49751577 - L1M4 LINE L1 -1728 4418 4374 344 136 30 0 chr5 149878573 149878639 -49751511 - L1MA10 LINE L1 -2 6332 6265 2194 117 0 13 chr5 149878724 149879031 -49751119 - AluSx SINE Alu -9 303 1 596 77 39 0 chr5 149879085 149879163 -49750987 - U6 snRNA snRNA -26 81 1 5551 130 46 32 chr5 149879169 149880037 -49750113 - L1MA8 LINE L1 -4 6287 5394 2350 98 0 19 chr5 149880037 149880355 -49749795 - AluSq SINE Alu -1 312 1 5551 130 46 32 chr5 149880355 149880564 -49749586 - L1MA8 LINE L1 -897 5394 5190 1756 174 10 0 chr5 149880580 149880873 -49749277 - AluJo SINE Alu -16 296 1 1752 170 7 0 chr5 149880967 149881272 -49748878 - AluJo SINE Alu 0 309 3 1220 185 0 5 chr5 149881428 149881628 -49748522 + AluJo SINE Alu 81 279 -33 2137 134 10 0 chr5 149881667 149881966 -49748184 - AluSx SINE Alu -10 302 1 1871 174 7 3 chr5 149882287 149882591 -49747559 + AluJb SINE Alu 6 310 -2 1813 197 3 0 chr5 149882720 149883025 -49747125 + AluJb SINE Alu 1 306 -6 386 185 0 0 chr5 149883093 149883158 -49746992 + AluJ/FLAM SINE Alu 2 66 -236 1547 204 7 7 chr5 149883986 149884271 -49745879 + AluJo SINE Alu 1 285 -27 27 49 0 0 chr5 149884271 149884312 -49745838 + AT_rich Low_complexity Low_complexity 1 41 0 1910 116 4 0 chr5 149885730 149885997 -49744153 + AluSx SINE Alu 1 268 -44 1156 191 160 15 chr5 149886191 149886453 -49743697 + AluJo SINE Alu 2 301 -1 1005 127 0 0 chr5 149886561 149886695 -49743455 + AluSq/x SINE Alu 1 134 -179 2274 102 0 3 chr5 149886697 149887000 -49743150 + AluSx SINE Alu 1 302 -10 2061 131 0 33 chr5 149887003 149887139 -49743011 + AluSx SINE Alu 1 140 -172 2282 84 6 32 chr5 149887139 149887450 -49742700 + AluSq SINE Alu 1 303 -10 2061 131 0 33 chr5 149887450 149887618 -49742532 + AluSx SINE Alu 140 295 -17 2185 117 0 16 chr5 149887786 149888095 -49742055 - AluSx SINE Alu -8 304 1 1879 143 35 0 chr5 149888128 149888415 -49741735 + AluSx SINE Alu 1 297 -15 2364 56 3 36 chr5 149889149 149889455 -49740695 - AluY SINE Alu -15 296 1 311 95 0 0 chr5 149889554 149889596 -49740554 + 5S rRNA rRNA 1 42 -79 1496 170 33 0 chr5 149889785 149890061 -49740089 + L1MB3 LINE L1 5895 6179 -4 1634 120 4 17 chr5 149890188 149890292 -49739858 - AluSx SINE Alu -74 238 134 2401 89 3 0 chr5 149890292 149890594 -49739556 - AluSq SINE Alu -10 303 1 1634 120 4 17 chr5 149890594 149890730 -49739420 - AluSx SINE Alu -178 134 1 2299 60 43 0 chr5 149890780 149891061 -49739089 - AluY SINE Alu -16 295 3 602 281 127 42 chr5 149891197 149892054 -49738096 - L1MC4a LINE L1 -748 5398 5153 2238 86 17 3 chr5 149892081 149892371 -49737779 - AluSp SINE Alu -19 294 1 2133 118 4 0 chr5 149892743 149893045 -49737105 - AluSg SINE Alu 0 306 4 2333 92 0 20 chr5 149893151 149893455 -49736695 + AluSg SINE Alu 1 298 -12 231 342 0 0 chr5 149893613 149893730 -49736420 + L1M1 LINE L1 5735 5851 -451 629 244 120 62 chr5 149896478 149896565 -49733585 - MIR SINE MIR -24 238 157 2238 121 0 0 chr5 149896565 149896862 -49733288 - AluSq SINE Alu -16 297 1 629 244 120 62 chr5 149896862 149896999 -49733151 - MIR SINE MIR -105 157 1 373 272 59 44 chr5 149897236 149897372 -49732778 + MIR3 SINE MIR 3 140 -68 1405 175 15 133 chr5 149897417 149897817 -49732333 + MLT1A1 LTR MaLR 8 360 -5 2478 74 7 0 chr5 149897915 149898212 -49731938 + AluSc SINE Alu 1 299 -10 751 165 0 0 chr5 149898235 149898350 -49731800 + AluJ SINE Alu 21 135 -177 26 0 0 0 chr5 149898406 149898432 -49731718 + AT_rich Low_complexity Low_complexity 1 26 0 1781 164 7 3 chr5 149898434 149898721 -49731429 + AluJb SINE Alu 1 288 -24 1094 148 32 37 chr5 149898750 149898939 -49731211 + AluJ SINE Alu 123 310 -2 4980 63 64 135 chr5 149898950 149899839 -49730311 + LTR12 LTR ERV1 1 826 0 1866 161 13 0 chr5 149900003 149900301 -49729849 + AluJb SINE Alu 1 302 -10 2228 124 0 13 chr5 149901422 149901737 -49728413 - AluSx SINE Alu -1 311 1 1561 112 0 14 chr5 149901739 149901954 -49728196 - AluJo SINE Alu -16 296 85 2587 59 0 7 chr5 149902066 149902372 -49727778 + AluY SINE Alu 1 304 -7 778 160 23 8 chr5 149902532 149902663 -49727487 + FLAM_C SINE Alu 1 133 0 237 83 0 0 chr5 149902679 149902715 -49727435 + (TA)n Simple_repeat Simple_repeat 2 37 0 522 169 0 0 chr5 149902909 149902986 -49727164 + AluJ/FLAM SINE Alu 2 78 -234 1737 191 3 7 chr5 149903037 149903330 -49726820 + AluJb SINE Alu 2 293 -19 1120 64 114 140 chr5 149903439 149903675 -49726475 + MER30 DNA MER1_type 1 230 0 25 21 0 43 chr5 149903727 149903742 -49726408 + AT_rich Low_complexity Low_complexity 1 15 -30 1853 182 10 3 chr5 149903742 149904050 -49726100 - AluJb SINE Alu -2 310 1 25 21 0 43 chr5 149904050 149904081 -49726069 + AT_rich Low_complexity Low_complexity 15 45 0 1751 157 7 23 chr5 149904164 149904464 -49725686 + AluJo SINE Alu 1 295 -17 1573 157 4 27 chr5 149904538 149904800 -49725350 - AluJo SINE Alu -56 256 1 24 32 0 0 chr5 149904877 149904908 -49725242 + AT_rich Low_complexity Low_complexity 1 31 0 1765 144 49 14 chr5 149905501 149905785 -49724365 - AluJo SINE Alu -14 298 5 835 224 32 48 chr5 149905827 149906077 -49724073 - MIR SINE MIR -14 248 3 296 270 0 34 chr5 149906546 149906635 -49723515 - L2 LINE L2 -36 3277 3192 367 177 0 0 chr5 149906638 149906700 -49723450 + MER117 DNA MER1_type 18 79 -118 1819 114 20 102 chr5 149907033 149907241 -49722909 - AluYb8 SINE Alu -3 315 144 2446 71 0 3 chr5 149907241 149907536 -49722614 - AluSx SINE Alu -18 294 1 1819 114 20 102 chr5 149907536 149907670 -49722480 - AluYb8 SINE Alu -174 144 1 286 264 189 0 chr5 149907670 149907776 -49722374 - L2 LINE L2 -11 3302 3177 2362 103 6 0 chr5 149909044 149909355 -49720795 - AluSq SINE Alu 0 313 1 2268 97 3 3 chr5 149910210 149910509 -49719641 - AluSx SINE Alu -12 300 2 2241 100 0 13 chr5 149910540 149910841 -49719309 + AluSp SINE Alu 1 297 -16 1651 153 27 4 chr5 149910940 149911202 -49718948 - AluJo SINE Alu -44 268 1 1607 159 16 4 chr5 149911260 149911517 -49718633 - AluJo SINE Alu -23 289 30 2402 92 0 0 chr5 149911520 149911814 -49718336 - AluSg SINE Alu -16 294 1 387 0 0 0 chr5 149912202 149912245 -49717905 + (CA)n Simple_repeat Simple_repeat 2 44 0 290 148 0 33 chr5 149913495 149913556 -49716594 - MIR SINE MIR -46 216 158 2445 84 0 13 chr5 149913809 149914119 -49716031 - AluSp SINE Alu -7 306 1 1562 136 25 102 chr5 149914144 149914467 -49715683 - AluJo SINE Alu -14 298 1 190 182 0 0 chr5 149915954 149915987 -49714163 - L2 LINE L2 -18 3295 3263 25 0 0 0 chr5 149916015 149916040 -49714110 + AT_rich Low_complexity Low_complexity 1 25 0 1542 126 21 132 chr5 149916659 149916984 -49713166 - AluJb SINE Alu -11 291 3 1939 140 20 7 chr5 149917579 149917872 -49712278 - AluJo SINE Alu -15 297 1 631 223 33 0 chr5 149917935 149918056 -49712094 + FLAM_C SINE Alu 1 125 -8 22 0 0 0 chr5 149918056 149918078 -49712072 + AT_rich Low_complexity Low_complexity 1 22 0 216 266 0 0 chr5 149918078 149918091 -49712059 + GA-rich Low_complexity Low_complexity 2 14 -66 1443 188 49 26 chr5 149918091 149918395 -49711755 + AluJb SINE Alu 1 311 -1 216 266 0 0 chr5 149918395 149918460 -49711690 + GA-rich Low_complexity Low_complexity 13 80 0 2075 143 3 3 chr5 149920831 149921132 -49709018 + AluSx SINE Alu 1 301 -11 1884 125 3 83 chr5 149922351 149922684 -49707466 + AluSx SINE Alu 1 308 0 466 269 126 6 chr5 149922856 149923038 -49707112 - MIR SINE MIR -54 208 5 2133 105 34 0 chr5 149925077 149925372 -49704778 + AluSq SINE Alu 1 305 -8 525 276 175 0 chr5 149927050 149927267 -49702883 - MIR SINE MIR -4 258 4 2438 86 0 0 chr5 149927632 149927936 -49702214 + AluSc SINE Alu 1 304 -5 1207 158 35 106 chr5 149927953 149928264 -49701886 + AluJo SINE Alu 7 295 -17 21 0 0 0 chr5 149928449 149928470 -49701680 + AT_rich Low_complexity Low_complexity 1 21 0 2188 129 0 0 chr5 149928504 149928799 -49701351 + AluSx SINE Alu 1 295 -17 194 62 31 0 chr5 149928931 149928963 -49701187 + (CA)n Simple_repeat Simple_repeat 2 34 0 570 282 19 13 chr5 149928963 149929119 -49701031 - FRAM SINE Alu -9 157 1 1107 179 39 10 chr5 149929158 149929365 -49700785 - AluJb SINE Alu -99 213 1 1159 161 59 20 chr5 149929365 149929545 -49700605 - L1MA6 LINE L1 -328 5972 5778 243 0 0 0 chr5 149929545 149929572 -49700578 + (TG)n Simple_repeat Simple_repeat 2 28 0 1159 161 59 20 chr5 149929572 149929645 -49700505 - L1MA6 LINE L1 -522 5778 5709 358 219 24 73 chr5 149929624 149929703 -49700447 + L1MA10 LINE L1 6210 6282 -52 * 2108 119 14 3 chr5 149929703 149929996 -49700154 + AluSx SINE Alu 1 296 -16 358 219 24 73 chr5 149929996 149930039 -49700111 + L1MA10 LINE L1 6282 6326 -8 642 275 34 59 chr5 149930040 149930276 -49699874 + MLT1J LTR MaLR 210 439 -72 2418 71 17 0 chr5 149930280 149930574 -49699576 - AluY SINE Alu -12 299 1 1164 174 68 5 chr5 149930826 149931033 -49699117 + AluJo SINE Alu 1 220 -92 301 143 20 0 chr5 149931033 149931082 -49699068 + AluJo SINE Alu 86 135 -167 1545 112 9 9 chr5 149931106 149931329 -49698821 + AluJb SINE Alu 86 308 -4 2614 132 41 88 chr5 149931329 149931701 -49698449 + L1MB8 LINE L1 5600 5936 -242 1587 148 80 8 chr5 149931701 149931965 -49698185 + AluSg SINE Alu 1 283 -27 2614 132 41 88 chr5 149931965 149932198 -49697952 + L1MB8 LINE L1 5936 6178 0 1665 151 49 11 chr5 149932211 149932496 -49697654 + AluJb SINE Alu 6 301 -11 1304 131 123 45 chr5 149932504 149932772 -49697378 + AluSc SINE Alu 9 297 -12 436 156 0 0 chr5 149932781 149932858 -49697292 + AluJ/FRAM SINE Alu 231 307 -5 182 211 0 70 chr5 149935541 149935598 -49694552 - MIR SINE MIR -140 122 70 964 197 50 46 chr5 149935662 149935880 -49694270 - MER20 DNA MER1_type 0 219 1 244 254 25 107 chr5 149935956 149936053 -49694097 + L2 LINE L2 3200 3287 -26 2197 115 0 13 chr5 149936053 149936367 -49693783 - AluSx SINE Alu -2 310 1 244 254 25 107 chr5 149936367 149936391 -49693759 + L2 LINE L2 3287 3311 -2 * 481 258 23 23 chr5 149936387 149936519 -49693631 - MIR SINE MIR -95 167 36 248 353 33 33 chr5 149937311 149937461 -49692689 - MIR SINE MIR -105 157 8 184 265 20 0 chr5 149941129 149941178 -49688972 - MIR SINE MIR -123 85 36 319 223 97 19 chr5 149941957 149942060 -49688090 - MIR SINE MIR 0 262 152 534 154 206 0 chr5 149942060 149942196 -49687954 - MER104 DNA Tc2 -1 179 16 1711 163 14 17 chr5 149944653 149944948 -49685202 - AluJo SINE Alu -18 294 1 2102 135 0 0 chr5 149945577 149945873 -49684277 + AluSx SINE Alu 12 307 -5 1898 108 89 4 chr5 149945873 149946141 -49684009 + AluSx SINE Alu 1 292 -20 359 244 104 37 chr5 149946142 149946276 -49683874 + FLAM_A SINE Alu 1 133 0 935 156 0 81 chr5 149946498 149946684 -49683466 - AluSp SINE Alu -6 307 137 1714 185 10 3 chr5 149948320 149948617 -49681533 - AluJo SINE Alu -13 299 1 2245 130 0 0 chr5 149948703 149949003 -49681147 + AluSx SINE Alu 1 300 -12 2322 94 3 0 chr5 149949066 149949363 -49680787 + AluSp SINE Alu 1 298 -15 678 71 116 0 chr5 149949480 149949592 -49680558 + L1ME1 LINE L1 5748 5872 -294 1330 126 131 0 chr5 149949596 149949818 -49680332 + AluJo SINE Alu 40 290 -22 1223 174 96 4 chr5 149949818 149950088 -49680062 + L1ME1 LINE L1 5868 6162 -4 2023 92 0 15 chr5 149950095 149950366 -49679784 - AluSq SINE Alu -1 312 46 464 86 0 0 chr5 149950366 149950424 -49679726 - AluJ/FLAM SINE Alu -225 87 30 272 228 97 26 chr5 149950455 149950569 -49679581 + L1MC4 LINE L1 5813 5934 -1874 683 207 41 0 chr5 149950726 149950871 -49679279 - MIR SINE MIR -110 152 2 773 73 34 28 chr5 149950892 149951070 -49679080 + (TA)n Simple_repeat Simple_repeat 2 180 0 357 200 71 0 chr5 149951091 149951176 -49678974 + L1MC4 LINE L1 6612 6702 -1340 28 29 0 0 chr5 149951176 149951211 -49678939 + AT_rich Low_complexity Low_complexity 1 35 0 192 256 141 0 chr5 149951492 149951570 -49678580 - L2 LINE L2 -8 3264 3176 2269 85 14 10 chr5 149951650 149951944 -49678206 - AluSg SINE Alu -15 295 1 2471 62 0 0 chr5 149951944 149952234 -49677916 - AluY SINE Alu -21 290 1 581 105 15 135 chr5 149952245 149952378 -49677772 - FLAM_A SINE Alu -2 140 24 1596 65 10 0 chr5 149952480 149952679 -49677471 + AluY SINE Alu 102 302 -9 2264 122 0 0 chr5 149952847 149953150 -49677000 - AluSg SINE Alu -7 303 1 261 57 0 0 chr5 149953294 149953329 -49676821 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 777 195 6 24 chr5 149953331 149953495 -49676655 - AluJb SINE Alu -30 282 122 607 227 8 0 chr5 149954671 149954803 -49675347 + FLAM_C SINE Alu 1 133 0 204 304 108 61 chr5 149954980 149955194 -49674956 - L2 LINE L2 -809 2505 2282 2012 139 4 0 chr5 149955478 149955787 -49674363 - AluSq SINE Alu 0 310 1 2253 118 0 0 chr5 149955893 149956190 -49673960 + AluSx SINE Alu 1 297 -15 931 130 0 0 chr5 149956870 149957001 -49673149 - FLAM_C SINE Alu -1 132 2 595 249 102 91 chr5 149957144 149957429 -49672721 + MER102a DNA MER1_type 40 327 -3 198 0 0 0 chr5 149957632 149957654 -49672496 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2106 103 4 0 chr5 149957667 149957939 -49672211 - AluSq SINE Alu -40 273 1 1965 211 58 125 chr5 149957964 149958563 -49671587 + L1MC4 LINE L1 6959 7597 -445 1297 166 44 0 chr5 149958563 149958792 -49671358 + L1MC2 LINE L1 6097 6335 -9 1965 211 58 125 chr5 149958792 149958985 -49671165 + L1MC4 LINE L1 7597 7801 -241 2195 111 0 3 chr5 149958985 149959282 -49670868 + AluSx SINE Alu 1 296 -16 1965 211 58 125 chr5 149959282 149959579 -49670571 + L1MC4 LINE L1 7801 7969 -73 2287 114 0 0 chr5 149959579 149959876 -49670274 + AluSx SINE Alu 2 298 -14 1965 211 58 125 chr5 149959876 149959945 -49670205 + L1MC4 LINE L1 7969 8041 -1 2367 62 42 0 chr5 149959977 149960266 -49669884 - AluY SINE Alu -8 303 3 1502 149 0 0 chr5 149960268 149960490 -49669660 - AluJb SINE Alu -4 308 87 2269 129 18 23 chr5 149960670 149961056 -49669094 + L1MB3 LINE L1 5766 6149 -34 989 136 117 28 chr5 149961144 149961358 -49668792 + MER46A DNA MER2_type 4 236 0 33 0 0 0 chr5 149962185 149962218 -49667932 + AT_rich Low_complexity Low_complexity 1 33 0 2267 116 0 0 chr5 149962239 149962540 -49667610 - AluSx SINE Alu -11 301 1 387 303 35 21 chr5 149962675 149962817 -49667333 + MIR SINE MIR 47 190 -72 1276 181 133 4 chr5 149963041 149963311 -49666839 + AluJo SINE Alu 1 305 -7 1894 125 45 11 chr5 149963325 149963612 -49666538 - AluSx SINE Alu -15 297 1 1307 204 72 11 chr5 149964153 149964432 -49665718 - AluJb SINE Alu -16 296 1 2258 112 20 3 chr5 149964505 149964810 -49665340 + AluSx SINE Alu 1 310 -2 2117 135 3 0 chr5 149964903 149965199 -49664951 + AluSx SINE Alu 1 297 -15 2179 111 0 23 chr5 149965287 149965593 -49664557 + AluSx SINE Alu 1 299 -13 2046 137 3 3 chr5 149965604 149965910 -49664240 + AluSx SINE Alu 1 306 -6 3822 127 26 28 chr5 149966252 149966768 -49663382 + L1PA16 LINE L1 5519 6035 -131 2075 102 11 3 chr5 149966768 149967051 -49663099 + AluSq SINE Alu 29 313 0 3822 127 26 28 chr5 149967051 149967182 -49662968 + L1PA16 LINE L1 6035 6165 -1 548 211 191 16 chr5 149967451 149967645 -49662505 - MIR SINE MIR -33 229 2 2196 98 20 0 chr5 149967675 149967972 -49662178 - AluSg SINE Alu -7 303 1 229 229 169 12 chr5 149968218 149968301 -49661849 - L3 LINE CR1 -65 1512 1417 306 285 98 0 chr5 149969266 149969389 -49660761 - MIR SINE MIR -11 251 117 2459 52 10 10 chr5 149969391 149969699 -49660451 + AluSc SINE Alu 1 308 -1 1747 156 0 53 chr5 149969953 149969987 -49660163 - AluJo SINE Alu -9 303 269 2332 56 13 29 chr5 149969987 149970293 -49659857 + AluY SINE Alu 1 301 -10 1747 156 0 53 chr5 149970293 149970578 -49659572 - AluJo SINE Alu -43 269 1 1602 132 17 71 chr5 149970609 149970904 -49659246 + AluJo SINE Alu 21 299 -13 2267 74 17 0 chr5 149970963 149971259 -49658891 + AluY SINE Alu 5 305 -6 1861 145 33 0 chr5 149971263 149971539 -49658611 + AluSx SINE Alu 1 285 -27 189 0 0 0 chr5 149971541 149971562 -49658588 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 403 248 101 0 chr5 149971653 149971782 -49658368 - L1ME4a LINE L1 -207 5914 5773 2104 124 17 0 chr5 149971782 149972080 -49658070 + AluSx SINE Alu 1 303 -9 1018 180 29 15 chr5 149972135 149972341 -49657809 - AluJo SINE Alu -103 209 1 897 188 51 6 chr5 149972341 149972517 -49657633 - L1MB7 LINE L1 -44 6140 5957 419 206 30 92 chr5 149972732 149972788 -49657362 + L1MC/D LINE L1 5691 5749 -2036 2313 93 3 7 chr5 149972788 149973088 -49657062 - AluSq SINE Alu -14 299 1 419 206 30 92 chr5 149973088 149973162 -49656988 + L1MC/D LINE L1 5749 5813 -1972 1339 122 30 10 chr5 149973173 149973370 -49656780 - AluSp SINE Alu -20 293 93 2483 66 3 3 chr5 149973436 149973741 -49656409 + AluY SINE Alu 1 305 -6 2334 99 0 3 chr5 149973923 149974217 -49655933 + AluSc SINE Alu 1 293 -16 3910 96 0 4 chr5 149974409 149974922 -49655228 - MER9 LTR ERVK 0 511 1 564 420 201 3 chr5 149974948 149975052 -49655098 + MIR SINE MIR 5 87 -175 532 67 0 111 chr5 149975052 149975091 -49655059 + MADE1 DNA Mariner 1 26 -54 2367 88 7 0 chr5 149975091 149975386 -49654764 - AluSq SINE Alu -16 297 1 532 67 0 111 chr5 149975386 149975436 -49654714 + MADE1 DNA Mariner 26 80 0 564 420 201 3 chr5 149975436 149975585 -49654565 + MIR SINE MIR 87 262 0 219 295 51 0 chr5 149975626 149975704 -49654446 - MIR SINE MIR -77 185 104 335 95 0 0 chr5 149975860 149975902 -49654248 - 5S rRNA rRNA -79 42 1 2147 133 0 7 chr5 149975935 149976236 -49653914 + AluJb SINE Alu 4 302 -10 2592 33 7 3 chr5 149976298 149976602 -49653548 - AluY SINE Alu -6 305 1 311 282 12 0 chr5 149976759 149976844 -49653306 + MIR3 SINE MIR 104 189 -19 2254 102 3 3 chr5 149976899 149977192 -49652958 + AluSg SINE Alu 1 293 -17 983 142 0 0 chr5 149977245 149977386 -49652764 + AluJb SINE Alu 1 141 -171 44 35 0 0 chr5 149977403 149977461 -49652689 + AT_rich Low_complexity Low_complexity 1 58 0 1532 198 0 4 chr5 149977525 149977793 -49652357 + AluJb SINE Alu 36 302 -10 2380 101 0 0 chr5 149977795 149978101 -49652049 + AluSc SINE Alu 1 306 -3 356 260 111 22 chr5 149978572 149978753 -49651397 - L2 LINE L2 0 3313 3117 891 236 163 42 chr5 149978793 149979217 -49650933 + MLT1H LTR MaLR 16 490 -59 256 291 60 34 chr5 149979277 149979394 -49650756 - L2 LINE L2 -253 3060 2941 2348 85 3 3 chr5 149980434 149980729 -49649421 + AluSp SINE Alu 1 295 -18 366 203 0 0 chr5 149980748 149980812 -49649338 - AluJ/monomer SINE Alu -5 297 234 3692 171 29 72 chr5 149980912 149981249 -49648901 + L1M4 LINE L1 4489 4839 -1345 655 149 9 19 chr5 149981249 149981356 -49648794 + U6 snRNA snRNA 1 106 -1 3692 171 29 72 chr5 149981356 149981611 -49648539 + L1M4 LINE L1 4839 5104 -1080 1722 177 13 3 chr5 149981611 149981911 -49648239 + AluJb SINE Alu 10 312 0 3692 171 29 72 chr5 149981911 149982377 -49647773 + L1M4 LINE L1 5104 5488 -696 2133 128 0 3 chr5 149982377 149982690 -49647460 + AluSq SINE Alu 1 312 -1 22 0 0 0 chr5 149982697 149982719 -49647431 + AT_rich Low_complexity Low_complexity 1 22 0 344 136 30 0 chr5 149982741 149982807 -49647343 - L1MA10 LINE L1 -2 6332 6265 2201 117 0 13 chr5 149982892 149983200 -49646950 - AluSx SINE Alu -8 304 1 596 77 39 0 chr5 149983254 149983332 -49646818 - U6 snRNA snRNA -26 81 1 5555 129 46 32 chr5 149983338 149984206 -49645944 - L1MA8 LINE L1 -4 6287 5394 2342 98 0 19 chr5 149984206 149984523 -49645627 - AluSq SINE Alu -2 311 1 5555 129 46 32 chr5 149984523 149984732 -49645418 - L1MA8 LINE L1 -897 5394 5190 1785 171 10 0 chr5 149984748 149985041 -49645109 - AluJo SINE Alu -16 296 1 1773 166 7 0 chr5 149985135 149985440 -49644710 - AluJo SINE Alu 0 309 3 1224 175 5 10 chr5 149985596 149985796 -49644354 + AluJo SINE Alu 81 279 -33 1873 163 10 7 chr5 149985835 149986136 -49644014 - AluSx SINE Alu -10 302 1 1867 176 7 3 chr5 149986457 149986763 -49643387 + AluJb SINE Alu 6 312 0 1756 196 3 7 chr5 149986888 149987194 -49642956 + AluJb SINE Alu 1 305 -7 386 185 0 0 chr5 149987263 149987328 -49642822 + AluJ/FLAM SINE Alu 2 66 -236 1547 204 7 7 chr5 149988156 149988441 -49641709 + AluJo SINE Alu 1 285 -27 1216 246 105 19 chr5 149988606 149988931 -49641219 - MER119 DNA MER1_type -224 359 7 289 233 17 142 chr5 149988937 149988994 -49641156 - MIR SINE MIR -59 203 141 2412 89 3 0 chr5 149988994 149989296 -49640854 - AluSp SINE Alu -9 304 2 289 233 17 142 chr5 149989296 149989353 -49640797 - MIR SINE MIR -121 141 79 2209 91 0 7 chr5 149989353 149989666 -49640484 - AluY SINE Alu 0 311 1 289 233 17 142 chr5 149989666 149989773 -49640377 - MIR SINE MIR -183 79 10 417 261 55 85 chr5 149989804 149990003 -49640147 - MIR3 SINE MIR -6 202 10 2086 118 20 0 chr5 149990344 149990640 -49639510 + AluSx SINE Alu 1 302 -10 1257 89 0 0 chr5 149990814 149990971 -49639179 - AluSg/x SINE Alu -10 300 144 274 174 43 0 chr5 149990971 149991017 -49639133 - Alu SINE Alu -252 50 3 2497 82 0 13 chr5 149991185 149991502 -49638648 + AluSp SINE Alu 1 313 0 2208 123 0 7 chr5 149991507 149991817 -49638333 + AluSx SINE Alu 1 308 -4 1494 175 62 31 chr5 149991826 149992117 -49638033 + AluJb SINE Alu 1 300 -12 1646 116 0 0 chr5 149992946 149993162 -49636988 + AluSq SINE Alu 1 216 -97 207 162 0 0 chr5 149993181 149993218 -49636932 + GA-rich Low_complexity Low_complexity 1 37 0 203 233 0 83 chr5 149993221 149993281 -49636869 - L2 LINE L2 -8 3305 3251 30 59 0 0 chr5 149993290 149993341 -49636809 + AT_rich Low_complexity Low_complexity 1 51 0 352 260 60 10 chr5 149993444 149993544 -49636606 - L1ME3A LINE L1 -105 6065 5961 1207 230 29 26 chr5 149993695 149994039 -49636111 - HAL1 LINE L1 -767 1740 1396 1254 263 87 15 chr5 149994049 149994452 -49635698 + LTR16A LTR ERVL 18 449 -1 270 186 82 63 chr5 149994553 149994666 -49635484 - MIR SINE MIR -63 145 38 223 134 30 75 chr5 149994968 149995003 -49635147 + A-rich Low_complexity Low_complexity 1 33 -31 2169 137 0 3 chr5 149995003 149995316 -49634834 + AluSq SINE Alu 2 313 0 223 134 30 75 chr5 149995316 149995347 -49634803 + A-rich Low_complexity Low_complexity 33 64 0 2582 36 0 20 chr5 149995481 149995786 -49634364 + AluY SINE Alu 1 299 -12 231 342 0 0 chr5 149995944 149996061 -49634089 + L1M1 LINE L1 5735 5851 -451 629 244 120 62 chr5 149998808 149998895 -49631255 - MIR SINE MIR -24 238 157 2238 121 0 0 chr5 149998895 149999192 -49630958 - AluSq SINE Alu -16 297 1 629 244 120 62 chr5 149999192 149999329 -49630821 - MIR SINE MIR -105 157 1 373 272 59 44 chr5 149999566 149999702 -49630448 + MIR3 SINE MIR 3 140 -68 1405 175 15 133 chr5 149999747 150000147 -49630003 + MLT1A1 LTR MaLR 8 360 -5 2487 74 7 0 chr5 150000245 150000543 -49629607 + AluSc SINE Alu 1 300 -9 751 165 0 0 chr5 150000566 150000681 -49629469 + AluJ SINE Alu 21 135 -177 26 0 0 0 chr5 150000737 150000763 -49629387 + AT_rich Low_complexity Low_complexity 1 26 0 1767 167 7 3 chr5 150000765 150001052 -49629098 + AluJb SINE Alu 1 288 -24 1094 148 32 37 chr5 150001081 150001270 -49628880 + AluJ SINE Alu 123 310 -2 5382 68 16 135 chr5 150001281 150002219 -49627931 + LTR12 LTR ERV1 1 826 0 1874 161 13 0 chr5 150002383 150002682 -49627468 + AluJb SINE Alu 1 303 -9 2228 124 0 13 chr5 150003805 150004120 -49626030 - AluSx SINE Alu -1 311 1 1561 112 0 14 chr5 150004122 150004337 -49625813 - AluJo SINE Alu -16 296 85 2587 59 0 7 chr5 150004449 150004755 -49625395 + AluY SINE Alu 1 304 -7 728 156 23 8 chr5 150004915 150005043 -49625107 + FLAM_C SINE Alu 1 130 -3 219 88 0 0 chr5 150005062 150005096 -49625054 + (TA)n Simple_repeat Simple_repeat 2 35 0 443 185 0 0 chr5 150005290 150005355 -49624795 + AluJ/FLAM SINE Alu 2 66 -246 2224 88 3 13 chr5 150105604 150105910 -49524240 + AluSg SINE Alu 1 303 -7 883 152 66 99 chr5 150106023 150106234 -49523916 - AluJo SINE Alu -101 211 8 1032 163 25 20 chr5 150106299 150106502 -49523648 - AluJo SINE Alu -9 303 100 826 101 0 8 chr5 150106544 150106663 -49523487 + AluSq/x SINE Alu 18 135 -178 1661 175 10 3 chr5 150106663 150106971 -49523179 + AluJb SINE Alu 1 310 -2 242 304 39 20 chr5 150107034 150107136 -49523014 - MIR3 SINE MIR -11 197 94 950 113 0 0 chr5 150107544 150107677 -49522473 + AluSq/x SINE Alu 1 133 -180 22 0 0 0 chr5 150107677 150107699 -49522451 + AT_rich Low_complexity Low_complexity 1 22 0 2163 99 0 0 chr5 150107707 150108009 -49522141 + AluY SINE Alu 1 302 -9 347 244 13 13 chr5 150108356 150108434 -49521716 + MIR SINE MIR 70 147 -61 659 254 292 11 chr5 150108519 150108698 -49521452 + L2 LINE L2 2301 2429 -843 1859 128 7 3 chr5 150108698 150108994 -49521156 - AluJo SINE Alu -15 297 1 659 254 292 11 chr5 150108994 150109331 -49520819 + L2 LINE L2 2429 3024 -248 417 248 40 10 chr5 150109429 150109530 -49520620 + L2 LINE L2 3188 3291 -22 23 33 0 0 chr5 150110450 150110480 -49519670 + GC_rich Low_complexity Low_complexity 1 30 0 443 232 226 12 chr5 150113601 150113765 -49516385 - MIR SINE MIR -13 249 51 1375 113 0 0 chr5 150115123 150115308 -49514842 + AluSx SINE Alu 1 185 -127 26 0 0 0 chr5 150115320 150115346 -49514804 + AT_rich Low_complexity Low_complexity 1 26 0 2203 68 25 0 chr5 150115348 150115651 -49514499 + AluY SINE Alu 1 310 0 186 352 127 21 chr5 150115739 150115881 -49514269 + MIR SINE MIR 103 259 -3 1062 104 80 0 chr5 150117327 150117490 -49512660 - AluSg/x SINE Alu -3 309 134 2271 76 7 3 chr5 150117490 150117791 -49512359 - AluSx SINE Alu -10 302 1 607 77 0 0 chr5 150117812 150117890 -49512260 + AluSg/x SINE Alu 212 289 -20 1880 122 56 0 chr5 150117979 150118267 -49511883 + AluSx SINE Alu 1 304 -8 450 311 43 19 chr5 150118316 150118477 -49511673 - MIR SINE MIR -80 182 18 2206 100 0 0 chr5 150119523 150119823 -49510327 - AluSc SINE Alu -9 300 1 2143 96 14 0 chr5 150119995 150120287 -49509863 + AluSg SINE Alu 1 296 -14 363 306 213 6 chr5 150120739 150120922 -49509228 - MIR SINE MIR -7 255 35 180 0 0 0 chr5 150121149 150121169 -49508981 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2221 75 3 3 chr5 150121171 150121464 -49508686 - AluY SINE Alu -18 293 1 303 29 0 0 chr5 150121831 150121865 -49508285 - MSTD LTR MaLR -12 384 351 884 130 8 0 chr5 150122067 150122198 -49507952 - MSTD LTR MaLR -264 132 1 204 206 0 0 chr5 150122318 150122352 -49507798 + MER5B DNA MER1_type 1 34 -144 1841 126 32 3 chr5 150122364 150122649 -49507501 + AluSx SINE Alu 1 293 -19 1936 139 3 0 chr5 150122651 150122946 -49507204 + AluSx SINE Alu 1 296 -16 1319 201 40 7 chr5 150123188 150123466 -49506684 + AluJo SINE Alu 4 290 -22 183 42 0 0 chr5 150124042 150124066 -49506084 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1814 124 65 3 chr5 150124073 150124364 -49505786 - AluSx SINE Alu -3 309 1 2139 105 3 0 chr5 150125157 150125462 -49504688 + AluSp SINE Alu 1 306 -7 1883 125 0 31 chr5 150126092 150126229 -49503921 + AluSg SINE Alu 1 126 -184 2126 112 0 0 chr5 150126229 150126523 -49503627 + AluY SINE Alu 1 294 -17 1883 125 0 31 chr5 150126523 150126672 -49503478 + AluSg SINE Alu 126 278 -32 2237 99 3 0 chr5 150127263 150127565 -49502585 - AluSx SINE Alu -9 303 1 2230 95 0 0 chr5 150127773 150128067 -49502083 + AluSg SINE Alu 1 294 -16 23 0 0 0 chr5 150128053 150128076 -49502074 + AT_rich Low_complexity Low_complexity 1 23 0 227 149 0 21 chr5 150128300 150128347 -49501803 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 2378 111 0 0 chr5 150128353 150128660 -49501490 + AluSc SINE Alu 1 307 -2 987 204 52 16 chr5 150128660 150128851 -49501299 - AluJb SINE Alu -16 296 99 1290 188 103 7 chr5 150128852 150129023 -49501127 - AluJb SINE Alu -3 309 156 2098 115 0 45 chr5 150129023 150129335 -49500815 - AluSx SINE Alu -14 298 1 1290 188 103 7 chr5 150129335 150129445 -49500705 - AluJb SINE Alu -156 156 1 874 144 81 89 chr5 150129448 150129684 -49500466 - L1MB7 LINE L1 -51 6133 5900 1206 94 13 0 chr5 150129686 150129845 -49500305 - AluSc SINE Alu -17 292 132 2314 85 0 3 chr5 150129845 150130139 -49500011 - AluSc SINE Alu -12 297 5 1362 209 51 63 chr5 150130143 150130191 -49499959 - L1MB7 LINE L1 -267 5911 5864 2141 117 0 0 chr5 150130191 150130505 -49499645 - AluY SINE Alu 0 314 1 1362 209 51 63 chr5 150130505 150130867 -49499283 - L1MB7 LINE L1 -314 5864 5505 611 211 42 11 chr5 150130870 150131060 -49499090 - L1MB7 LINE L1 -789 5357 5162 195 179 51 0 chr5 150131312 150131351 -49498799 - MER5B DNA MER1_type -132 46 6 2275 93 0 10 chr5 150131400 150131701 -49498449 + AluSq SINE Alu 1 298 -15 3243 170 58 23 chr5 150131738 150132390 -49497760 - L1MB2 LINE L1 -1 6170 5496 1708 172 14 10 chr5 150132390 150132687 -49497463 - AluJo SINE Alu -7 305 8 1256 238 34 18 chr5 150132871 150133258 -49496892 - L1MB7 LINE L1 -2740 3406 3014 668 128 24 8 chr5 150133258 150133383 -49496767 + L1P4 LINE L1 5364 5490 -676 2170 114 0 3 chr5 150133549 150133848 -49496302 - AluSg SINE Alu -12 298 1 1873 154 0 7 chr5 150134717 150135003 -49495147 + AluSx SINE Alu 1 284 -28 2040 122 16 29 chr5 150135003 150135314 -49494836 - AluSx SINE Alu -5 307 1 1876 152 67 95 chr5 150135686 150135830 -49494320 - L1MB8 LINE L1 -120 6058 5911 2208 125 0 6 chr5 150135830 150136142 -49494008 - AluSg SINE Alu 0 310 1 1876 152 67 95 chr5 150136142 150136523 -49493627 - L1MB8 LINE L1 -267 5911 5548 1674 146 0 16 chr5 150136586 150136839 -49493311 - AluSx SINE Alu -26 286 38 180 0 0 0 chr5 150136839 150136859 -49493291 + (TG)n Simple_repeat Simple_repeat 2 21 0 1076 106 43 0 chr5 150136859 150137020 -49493130 - L1MA2 LINE L1 -1 6303 6136 2115 138 16 0 chr5 150137779 150138083 -49492067 - AluSx SINE Alu -3 309 1 395 134 15 30 chr5 150138203 150138270 -49491880 + AluJ/FLAM SINE Alu 1 66 -236 952 173 13 0 chr5 150138506 150138662 -49491488 + FRAM SINE Alu 5 162 -14 1458 170 71 25 chr5 150138676 150138959 -49491191 - AluJb SINE Alu -16 296 1 1399 173 38 8 chr5 150138960 150139226 -49490924 - L1MB3 LINE L1 -124 6059 5786 2004 91 94 0 chr5 150139727 150140002 -49490148 + AluSg SINE Alu 1 301 -9 342 0 0 0 chr5 150140971 150141009 -49489141 + (TA)n Simple_repeat Simple_repeat 2 39 0 1937 153 7 7 chr5 150141009 150141316 -49488834 - AluJb SINE Alu -5 307 1 21 0 0 0 chr5 150141567 150141588 -49488562 + AT_rich Low_complexity Low_complexity 1 21 0 393 75 0 0 chr5 150141798 150141851 -49488299 + (TG)n Simple_repeat Simple_repeat 1 53 0 2153 131 3 3 chr5 150142844 150143156 -49486994 - AluJb SINE Alu 0 312 1 1652 187 24 7 chr5 150143156 150143315 -49486835 - AluJo SINE Alu -13 299 131 2506 76 3 0 chr5 150143315 150143618 -49486532 - AluSq SINE Alu -8 305 2 1652 187 24 7 chr5 150143618 150143752 -49486398 - AluJo SINE Alu -181 131 1 204 111 0 0 chr5 150143754 150143790 -49486360 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 214 289 201 13 chr5 150147420 150147579 -49482571 - MIR SINE MIR -46 216 28 2060 113 17 0 chr5 150148663 150148955 -49481195 + AluSx SINE Alu 2 298 -14 227 237 0 34 chr5 150149635 150149694 -49480456 - MIR SINE MIR -182 80 24 1503 121 0 36 chr5 150149962 150150185 -49479965 - AluJb SINE Alu -13 299 85 2293 90 0 20 chr5 150150188 150150488 -49479662 - AluY SINE Alu -17 294 1 551 172 0 0 chr5 150150490 150150583 -49479567 - AluJb SINE Alu -218 94 2 349 294 55 18 chr5 150150588 150150751 -49479399 - MIR3 SINE MIR -17 191 23 271 337 142 0 chr5 150151610 150151779 -49478371 - L2 LINE L2 0 3272 3080 2496 77 0 3 chr5 150151922 150152304 -49477846 - AluSc SINE Alu 0 381 1 290 138 0 0 chr5 150152347 150152408 -49477742 - L1MB7 LINE L1 -1 6177 6117 710 114 19 0 chr5 150152473 150152578 -49477572 + AluSg/x SINE Alu 197 303 -7 831 209 70 100 chr5 150152580 150152711 -49477439 - L1ME1 LINE L1 -79 6087 5954 2244 123 0 0 chr5 150152711 150153021 -49477129 - AluSx SINE Alu -2 310 1 831 209 70 100 chr5 150153021 150153156 -49476994 - L1ME1 LINE L1 -212 5954 5828 1811 135 36 36 chr5 150153156 150153460 -49476690 - AluJo SINE Alu -8 304 1 831 209 70 100 chr5 150153460 150153493 -49476657 - L1ME1 LINE L1 -338 5828 5796 3536 191 75 34 chr5 150153503 150153695 -49476455 + MER21B LTR ERV1 12 195 -668 2368 102 3 13 chr5 150153695 150154010 -49476140 + AluSx SINE Alu 1 312 0 3536 191 75 34 chr5 150154010 150154586 -49475564 + MER21B LTR ERV1 195 812 -51 845 167 25 6 chr5 150154599 150154761 -49475389 - L1ME1 LINE L1 -358 5806 5642 1546 194 159 36 chr5 150154761 150155033 -49475117 - L1ME1 LINE L1 -780 5366 5129 1751 190 0 0 chr5 150155033 150155312 -49474838 + AluJo SINE Alu 3 281 -31 1546 194 159 36 chr5 150155312 150155411 -49474739 - L1ME1 LINE L1 -1017 5129 5044 1949 161 23 0 chr5 150155411 150155716 -49474434 + AluJb SINE Alu 1 312 0 1546 194 159 36 chr5 150155716 150155839 -49474311 - L1ME1 LINE L1 -1102 5044 4810 641 208 0 0 chr5 150155998 150156118 -49474032 - AluJb SINE Alu -8 304 185 1774 25 8 50 chr5 150256123 150256266 -49373884 - L1P2 LINE L1 -529 5625 5494 2536 32 3 19 chr5 150256266 150256577 -49373573 - AluY SINE Alu -5 306 1 1774 25 8 50 chr5 150256577 150256672 -49373478 - L1P2 LINE L1 -660 5494 5397 2208 152 6 0 chr5 150257643 150258004 -49372146 + MER47A DNA MER2_type 4 366 0 5127 216 41 52 chr5 150258471 150260296 -49369854 - L1MC/D LINE L1 -743 5403 3781 734 133 16 16 chr5 150260298 150260426 -49369724 - FRAM SINE Alu -2 174 47 577 315 60 9 chr5 150260665 150260881 -49369269 - MIR SINE MIR -30 232 6 317 338 126 15 chr5 150261272 150261470 -49368680 - L3 LINE CR1 -254 1323 1104 381 259 98 85 chr5 150261473 150261697 -49368453 - L3 LINE CR1 -260 1317 1091 336 376 40 0 chr5 150262404 150262529 -49367621 - L2 LINE L2 0 3272 3143 1959 142 13 13 chr5 150262555 150262873 -49367277 + MER44D DNA MER2_type 21 608 -1 240 35 0 0 chr5 150263164 150263193 -49366957 + (TG)n Simple_repeat Simple_repeat 1 29 0 259 173 39 0 chr5 150263231 150263283 -49366867 - MER65A LTR ERV1 -391 54 1 3177 175 58 45 chr5 150263283 150264303 -49365847 - L1M2 LINE L1 -646 5645 4614 * 4693 173 19 10 chr5 150264293 150265186 -49364964 + L1 LINE L1 3329 4229 -1917 1652 133 37 0 chr5 150265186 150265457 -49364693 - MER2 DNA MER2_type 0 345 65 352 250 90 0 chr5 150265564 150265664 -49364486 - MIR SINE MIR -147 115 7 23 68 0 0 chr5 150266029 150266073 -49364077 + AT_rich Low_complexity Low_complexity 1 44 0 333 353 64 5 chr5 150268679 150268866 -49361284 + MIR3 SINE MIR 8 205 -3 195 42 0 0 chr5 150269087 150269111 -49361039 + (A)n Simple_repeat Simple_repeat 1 24 0 378 0 0 0 chr5 150269591 150269633 -49360517 + (TG)n Simple_repeat Simple_repeat 1 42 0 1545 107 4 21 chr5 150270029 150270262 -49359888 + THE1C LTR MaLR 147 375 0 1238 186 82 25 chr5 150270343 150270623 -49359527 + AluJb SINE Alu 1 296 -16 27 49 0 0 chr5 150270954 150270995 -49359155 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr5 150271961 150271983 -49358167 + AT_rich Low_complexity Low_complexity 1 22 0 343 185 23 149 chr5 150272406 150272622 -49357528 - L1 LINE L1 -771 5375 5187 233 224 0 0 chr5 150272985 150273034 -49357116 + (TATG)n Simple_repeat Simple_repeat 3 51 0 24 0 0 0 chr5 150273166 150273190 -49356960 + AT_rich Low_complexity Low_complexity 1 24 0 1261 154 8 49 chr5 150273662 150273908 -49356242 + MER46A DNA MER2_type 1 236 0 361 118 0 0 chr5 150275101 150275152 -49354998 + 5S rRNA rRNA 1 51 -70 2239 101 0 26 chr5 150275444 150275751 -49354399 + AluSx SINE Alu 1 299 -13 219 69 0 0 chr5 150275977 150276006 -49354144 + (T)n Simple_repeat Simple_repeat 1 29 0 1001 167 52 0 chr5 150276684 150276858 -49353292 + MSTB LTR MaLR 244 426 0 1295 194 98 22 chr5 150276954 150277269 -49352881 + MER2 DNA MER2_type 7 345 0 1626 193 30 0 chr5 150277395 150277696 -49352454 + AluJo SINE Alu 3 312 0 263 228 0 18 chr5 150277759 150277816 -49352334 + GA-rich Low_complexity Low_complexity 4 59 0 336 289 89 63 chr5 150277962 150278152 -49351998 - MIR SINE MIR -11 251 57 468 251 215 5 chr5 150278526 150278717 -49351433 + L1ME1 LINE L1 5859 6089 -77 13123 138 31 4 chr5 150278717 150280842 -49349308 + Tigger1 DNA MER2_type 1 2183 -235 24 0 0 0 chr5 150281149 150281173 -49348977 + AT_rich Low_complexity Low_complexity 1 24 0 2438 74 0 0 chr5 150281963 150282274 -49347876 + AluY SINE Alu 1 311 0 340 138 28 18 chr5 150282333 150282442 -49347708 + (TA)n Simple_repeat Simple_repeat 1 110 0 592 241 206 5 chr5 150282496 150282695 -49347455 - MIR SINE MIR -19 243 5 2534 114 75 15 chr5 150283121 150283523 -49346627 - MLT2A1 LTR ERVL -18 426 1 25 0 0 0 chr5 150284019 150284044 -49346106 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr5 150284150 150284183 -49345967 + AT_rich Low_complexity Low_complexity 1 33 0 851 241 15 26 chr5 150284203 150284473 -49345677 - L1MB8 LINE L1 -1 6177 5911 23 33 0 0 chr5 150284719 150284749 -49345401 + AT_rich Low_complexity Low_complexity 1 30 0 192 200 0 0 chr5 150284751 150284801 -49345349 + A-rich Low_complexity Low_complexity 4 53 0 6541 60 7 41 chr5 150284901 150286098 -49344052 + L1PA7 LINE L1 4980 6146 -8 3016 134 26 0 chr5 150286101 150286639 -49343511 + L1MC/D LINE L1 5188 5739 -594 259 231 99 33 chr5 150286716 150286807 -49343343 - MIR SINE MIR -1 261 165 332 256 116 107 chr5 150286966 150287247 -49342903 - MLT1H LTR MaLR -206 343 24 540 90 0 0 chr5 150287247 150287325 -49342825 - L1PA11 LINE L1 -1 6173 6096 332 256 116 107 chr5 150287325 150287350 -49342800 - MLT1H LTR MaLR -525 24 1 667 253 16 113 chr5 150287491 150287941 -49342209 + L1MEc LINE L1 1361 1766 -4630 2199 116 0 0 chr5 150289401 150289694 -49340456 - AluSg SINE Alu -17 293 1 2137 99 3 3 chr5 150289886 150290199 -49339951 - AluSg SINE Alu 0 313 1 23 0 0 0 chr5 150290398 150290421 -49339729 + AT_rich Low_complexity Low_complexity 1 23 0 2124 73 13 73 chr5 150291378 150291693 -49338457 + AluY SINE Alu 1 296 -15 23 33 0 0 chr5 150292275 150292305 -49337845 + AT_rich Low_complexity Low_complexity 1 30 0 267 152 0 0 chr5 150292773 150292819 -49337331 + (TA)n Simple_repeat Simple_repeat 2 47 0 2774 178 45 45 chr5 150292836 150293471 -49336679 + MER66A-int LTR ERV1 1884 4441 -2235 511 231 9 22 chr5 150293471 150293594 -49336556 + MER4D LTR ERV1 35 160 -580 1838 129 45 92 chr5 150293595 150293998 -49336152 + MER66A-int LTR ERV1 4558 4941 -1735 1827 134 36 0 chr5 150293987 150294264 -49335886 + MER66A-int LTR ERV1 6390 6676 0 * 1335 203 132 33 chr5 150294343 150294782 -49335368 + MER66A LTR ERV1 97 478 0 2199 243 54 12 chr5 150294782 150295341 -49334809 + MLT1E3 LTR MaLR 43 624 0 33 0 0 0 chr5 150297485 150297518 -49332632 + AT_rich Low_complexity Low_complexity 1 33 0 239 333 72 22 chr5 150297846 150297984 -49332166 - MIR SINE MIR -101 161 17 227 164 3 0 chr5 150298064 150298108 -49332042 - MIR SINE MIR -63 145 107 377 234 189 11 chr5 150298402 150298577 -49331573 + HAL1 LINE L1 1481 1686 -821 307 250 145 57 chr5 150299547 150299671 -49330479 + Charlie2 DNA MER1_type 54 188 -2674 1304 236 158 38 chr5 150299882 150300547 -49329603 + Charlie2 DNA MER1_type 2012 2756 -106 2499 70 0 0 chr5 150301118 150301416 -49328734 - AluSx SINE Alu -13 299 2 485 200 44 94 chr5 150303306 150303486 -49326664 - FAM SINE Alu -4 171 1 1260 252 40 3 chr5 150304169 150304498 -49325652 + MER58B DNA MER1_type 1 341 0 6018 130 37 10 chr5 150304592 150305872 -49324278 - L1MA8 LINE L1 -6 6285 4985 629 352 58 60 chr5 150306425 150307045 -49323105 - L3 LINE CR1 -15 1562 944 348 242 13 34 chr5 150308202 150308351 -49321799 - Charlie7 DNA MER1_type 0 2612 2467 811 234 22 16 chr5 150308651 150308835 -49321315 - MIR SINE MIR -56 206 22 278 309 125 15 chr5 150308982 150309118 -49321032 - MIR3 SINE MIR -1 207 57 470 355 10 5 chr5 150309148 150309348 -49320802 - MIR SINE MIR -15 247 47 213 39 0 0 chr5 150309871 150309897 -49320253 + (CA)n Simple_repeat Simple_repeat 2 27 0 276 30 0 0 chr5 150310312 150310345 -49319805 + (TG)n Simple_repeat Simple_repeat 2 34 0 875 323 154 19 chr5 150310760 150311410 -49318740 + L2 LINE L2 1484 2221 -1093 10076 134 17 24 chr5 150311414 150313087 -49317063 + Tigger1 DNA MER2_type 1 1661 -757 769 150 0 0 chr5 150313187 150313307 -49316843 - FLAM_C SINE Alu -23 120 1 9105 177 120 52 chr5 150313309 150316309 -49313841 - L1MCa LINE L1 -3215 3211 23 271 331 87 27 chr5 150316315 150316499 -49313651 + L2 LINE L2 2654 2848 -466 1736 148 133 18 chr5 150316903 150317287 -49312863 + MSTA LTR MaLR 1 428 0 2244 85 0 10 chr5 150317829 150318122 -49312028 + AluSc SINE Alu 3 292 -17 1687 197 59 92 chr5 150318488 150319061 -49311089 + MLT2B3 LTR ERVL 1 554 0 453 36 0 0 chr5 150319302 150319357 -49310793 + (TATG)n Simple_repeat Simple_repeat 4 58 0 21 0 0 0 chr5 150320912 150320933 -49309217 + AT_rich Low_complexity Low_complexity 1 21 0 1270 206 39 58 chr5 150321025 150321335 -49308815 + AluJo SINE Alu 3 306 -6 232 283 85 19 chr5 150321611 150321717 -49308433 - L1ME LINE L1 -468 5653 5541 327 227 45 34 chr5 150322477 150322565 -49307585 + MIR3 SINE MIR 111 199 -9 1566 156 54 32 chr5 150322963 150323278 -49306872 - Tigger2 DNA MER2_type 0 2718 2397 1475 107 84 4 chr5 150323282 150323543 -49306607 - Tigger2 DNA MER2_type -2436 282 1 797 245 5 16 chr5 150326282 150326474 -49303676 + MER3 DNA MER1_type 19 208 -1 410 254 45 66 chr5 150326543 150326603 -49303547 + L1M4 LINE L1 5005 5065 -1081 2098 138 0 0 chr5 150326603 150326900 -49303250 + AluSx SINE Alu 9 305 -7 410 254 45 66 chr5 150326900 150327174 -49302976 + L1M4 LINE L1 5065 5332 -814 212 213 13 40 chr5 150327252 150327327 -49302823 + GA-rich Low_complexity Low_complexity 2 74 0 1863 127 62 3 chr5 150328821 150329113 -49301037 + AluJb SINE Alu 1 309 -3 242 211 77 0 chr5 150329711 150329763 -49300387 - MER20 DNA MER1_type 0 219 164 27 62 0 0 chr5 150330723 150330771 -49299379 + AT_rich Low_complexity Low_complexity 1 48 0 2034 142 0 7 chr5 150330910 150331205 -49298945 - AluJb SINE Alu -16 296 4 23137 32 3 2 chr5 150331680 150334981 -49295169 - L1P LINE L1 -854 5292 1990 318 318 45 8 chr5 150334997 150335129 -49295021 + L1MEc LINE L1 1440 1576 -4820 633 299 18 23 chr5 150335162 150335379 -49294771 - MIR SINE MIR -2 260 45 252 300 83 33 chr5 150335505 150335625 -49294525 - L2 LINE L2 -6 3307 3182 191 311 87 19 chr5 150335624 150335727 -49294423 + MIR SINE MIR 138 247 -15 * 289 362 10 55 chr5 150335791 150335990 -49294160 - L2 LINE L2 -179 3093 2904 368 314 200 16 chr5 150336213 150336458 -49293692 - L2 LINE L2 -798 2516 2227 3872 134 40 9 chr5 150336464 150337206 -49292944 - Tigger1 DNA MER2_type -3 2415 1582 653 105 18 18 chr5 150337612 150337726 -49292424 - MLT1C LTR MaLR -351 116 3 1111 268 196 2 chr5 150337727 150337836 -49292314 - L2 LINE L2 -993 2321 2234 1732 164 0 64 chr5 150337836 150338006 -49292144 + AluJo SINE Alu 1 144 -168 2139 134 0 0 chr5 150338006 150338304 -49291846 - AluSx SINE Alu -14 298 1 1732 164 0 64 chr5 150338304 150338445 -49291705 + AluJo SINE Alu 144 292 -20 1111 268 196 2 chr5 150338445 150338794 -49291356 - L2 LINE L2 -1080 2234 1774 900 181 78 0 chr5 150338794 150338960 -49291190 + AluJb SINE Alu 134 312 0 876 330 27 11 chr5 150338965 150339409 -49290741 - L2 LINE L2 -1534 1780 1233 557 268 37 63 chr5 150339486 150339676 -49290474 - MLT1K LTR MaLR -347 241 57 337 182 10 1 chr5 150339910 150339992 -49290158 + Alu SINE Alu 2 52 -250 434 253 253 21 chr5 150340085 150340370 -49289780 - MLT1I LTR MaLR 0 409 59 1926 164 0 13 chr5 150340497 150340801 -49289349 + AluJb SINE Alu 1 300 -12 22425 45 2 1 chr5 150340813 150343685 -49286465 + L1P LINE L1 1 2877 -3269 3864 134 59 30 chr5 150345286 150346064 -49284086 + L1MA8 LINE L1 5479 6279 -12 546 255 105 59 chr5 150346120 150346406 -49283744 - LTR33 LTR ERVL -70 451 153 1081 149 24 0 chr5 150346410 150346578 -49283572 + FRAM SINE Alu 1 170 -6 1392 199 101 21 chr5 150346738 150347114 -49283036 - MER21B LTR ERV1 -11 852 447 1120 201 112 8 chr5 150347111 150347360 -49282790 - MER21B LTR ERV1 -588 275 1 * 2942 220 19 21 chr5 150347748 150348548 -49281602 - L1M4 LINE L1 -1027 5119 4322 1626 133 27 104 chr5 150348548 150348885 -49281265 + AluJb SINE Alu 1 311 -1 23 33 0 0 chr5 150350120 150350150 -49280000 + AT_rich Low_complexity Low_complexity 1 30 0 187 328 170 35 chr5 150350347 150350435 -49279715 - MIR SINE MIR 0 262 187 1098 197 46 65 chr5 150350435 150350786 -49279364 + MER2 DNA MER2_type 1 344 0 187 328 170 35 chr5 150350786 150350926 -49279224 - MIR SINE MIR -75 187 3 419 267 107 32 chr5 150351157 150351344 -49278806 + MER63A DNA MER1_type 10 210 0 2178 167 114 21 chr5 150351521 150351897 -49278253 + L1MD2 LINE L1 5174 5643 -716 1272 231 93 50 chr5 150351897 150352381 -49277769 + MLT1D LTR MaLR 1 505 0 2178 167 114 21 chr5 150352381 150352578 -49277572 + L1MD2 LINE L1 5643 5820 -539 689 99 0 0 chr5 150352586 150352677 -49277473 + AluS SINE Alu 1 91 -221 1380 142 9 121 chr5 150352677 150353009 -49277141 + AluSx SINE Alu 1 295 -7 350 227 36 36 chr5 150353013 150353123 -49277027 + L1MD2 LINE L1 5825 5934 -425 937 171 0 0 chr5 150353141 150353287 -49276863 - FRAM SINE Alu -30 146 1 923 239 70 58 chr5 150353291 150353705 -49276445 + L1MD2 LINE L1 5928 6346 -13 302 214 179 7 chr5 150353776 150353921 -49276229 + Charlie7 DNA MER1_type 2443 2612 0 1867 166 0 14 chr5 150354231 150354527 -49275623 - AluJb SINE Alu -20 292 1 608 81 0 0 chr5 150356499 150356585 -49273565 - Alu SINE Alu -6 305 220 314 306 88 36 chr5 150356821 150357014 -49273136 + MIR SINE MIR 6 208 -54 198 247 55 14 chr5 150357123 150357196 -49272954 + MIR SINE MIR 135 210 -52 2865 6 0 0 chr5 150357574 150357885 -49272265 + AluYa5 SINE Alu 1 311 0 1736 179 30 0 chr5 150358318 150358438 -49271712 + AluJb SINE Alu 1 116 -196 372 43 0 0 chr5 150358438 150358484 -49271666 + (TGAA)n Simple_repeat Simple_repeat 4 49 0 1736 179 30 0 chr5 150358484 150358665 -49271485 + AluJb SINE Alu 116 311 -1 481 264 130 54 chr5 150359055 150359282 -49270868 - MIR SINE MIR 0 262 15 368 258 119 19 chr5 150359282 150359441 -49270709 - MER5B DNA MER1_type -3 175 1 481 264 130 54 chr5 150359441 150359452 -49270698 - MIR SINE MIR -247 15 6 250 204 56 0 chr5 150359904 150359958 -49270192 - L2 LINE L2 -6 3266 3210 249 325 38 64 chr5 150360295 150360452 -49269698 - MIR SINE MIR -86 176 24 209 270 32 0 chr5 150360656 150360719 -49269431 - MIR SINE MIR -112 96 32 31 0 0 0 chr5 150360767 150360798 -49269352 + AT_rich Low_complexity Low_complexity 1 31 0 1525 184 39 14 chr5 150360801 150361084 -49269066 - AluJo SINE Alu -22 290 1 2597 59 0 0 chr5 150361130 150361436 -49268714 + AluY SINE Alu 1 306 -5 472 173 0 3 chr5 150361473 150361561 -49268589 + MER58 DNA MER1_type 256 2420 0 21 0 0 0 chr5 150361638 150361659 -49268491 + AT_rich Low_complexity Low_complexity 1 21 0 2014 153 0 0 chr5 150362170 150362477 -49267673 - AluSx SINE Alu -5 307 1 1433 183 47 25 chr5 150362751 150362870 -49267280 + AluSx SINE Alu 1 116 -196 200 33 0 33 chr5 150362870 150362900 -49267250 + (TAAAA)n Simple_repeat Simple_repeat 1 29 0 1433 183 47 25 chr5 150362900 150363054 -49267096 + AluSx SINE Alu 116 280 -32 342 0 0 0 chr5 150363073 150363111 -49267039 + (TAAG)n Simple_repeat Simple_repeat 1 38 0 1065 148 22 0 chr5 150364109 150364291 -49265859 + L1PB4 LINE L1 5958 6143 -13 2287 72 3 63 chr5 150364909 150365227 -49264923 + AluSc SINE Alu 1 299 -10 22 0 0 0 chr5 150365912 150365934 -49264216 + AT_rich Low_complexity Low_complexity 1 22 0 2312 207 53 14 chr5 150366022 150366588 -49263562 + MER90 LTR ERV1 24 611 -3 601 341 38 25 chr5 150366647 150367090 -49263060 - L1MC/D LINE L1 -2035 5773 5325 332 319 64 47 chr5 150367105 150367340 -49262810 - L1MC/D LINE L1 -848 5298 5060 1307 166 43 8 chr5 150367340 150367575 -49262575 + AluJb SINE Alu 44 286 -26 507 353 144 5 chr5 150367581 150368204 -49261946 - L1MC/D LINE L1 -1047 5099 4383 298 238 76 49 chr5 150368524 150368747 -49261403 - L1MC/D LINE L1 -2113 4033 3805 2343 101 0 0 chr5 150368768 150369075 -49261075 + AluSg SINE Alu 1 307 -3 224 237 274 30 chr5 150370697 150370832 -49259318 - L2 LINE L2 -22 3291 3124 761 261 36 5 chr5 150371165 150371360 -49258790 - MIR SINE MIR -25 237 37 461 263 84 50 chr5 150371383 150371562 -49258588 - MIR SINE MIR 0 262 78 2001 117 50 10 chr5 150372639 150372939 -49257211 + AluSx SINE Alu 1 312 0 4539 128 48 48 chr5 150373650 150374581 -49255569 - Tigger3b DNA MER2_type -300 931 1 1972 109 101 23 chr5 150375044 150375392 -49254758 + THE1C LTR MaLR 1 375 0 245 325 25 0 chr5 150375844 150375924 -49254226 - L2 LINE L2 -5 3267 3186 24 32 0 0 chr5 150375990 150376021 -49254129 + AT_rich Low_complexity Low_complexity 1 31 0 880 287 72 14 chr5 150376372 150376790 -49253360 + L1MC4a LINE L1 5518 5959 -1849 353 114 67 0 chr5 150376790 150376895 -49253255 + (TA)n Simple_repeat Simple_repeat 2 113 0 26 0 0 0 chr5 150377290 150377316 -49252834 + AT_rich Low_complexity Low_complexity 1 26 0 183 284 49 37 chr5 150378070 150378151 -49251999 - MIR SINE MIR -117 145 64 677 170 85 46 chr5 150378578 150378731 -49251419 - MER20 DNA MER1_type 0 219 61 1505 173 4 0 chr5 150378997 150379251 -49250899 + AluJo SINE Alu 34 288 -24 2994 155 60 89 chr5 150380354 150381481 -49248669 + MER52C LTR ERV1 16 1278 0 1980 118 52 0 chr5 150383145 150383430 -49246720 + AluSx SINE Alu 1 298 -14 238 33 0 0 chr5 150383430 150383460 -49246690 + (GAA)n Simple_repeat Simple_repeat 2 180 0 498 322 37 16 chr5 150384273 150384515 -49245635 + MIR SINE MIR 16 262 0 512 206 46 15 chr5 150385790 150385921 -49244229 - MER58A DNA MER1_type -45 179 45 5742 177 151 36 chr5 150387060 150388532 -49241618 + MER52A LTR ERV1 1 1749 -6 1658 97 66 97 chr5 150388889 150389053 -49241097 - MER1B DNA MER1_type -2402 310 159 2329 91 0 10 chr5 150389053 150389351 -49240799 + AluSg SINE Alu 12 306 -4 1658 97 66 97 chr5 150389351 150389506 -49240644 - MER1B DNA MER1_type -2553 159 1 1813 112 37 81 chr5 150389586 150389907 -49240243 - AluJo SINE Alu -5 307 1 522 250 54 71 chr5 150390292 150390355 -49239795 + MIR SINE MIR 8 71 -191 1877 140 31 7 chr5 150390355 150390647 -49239503 + AluJb SINE Alu 1 299 -13 522 250 54 71 chr5 150390647 150390767 -49239383 + MIR SINE MIR 71 188 -74 2037 113 63 0 chr5 150390771 150391055 -49239095 + AluJb SINE Alu 1 302 -10 920 303 54 19 chr5 150391058 150391596 -49238554 - L1M4 LINE L1 -2595 3551 2995 2000 221 65 106 chr5 150391970 150392142 -49238008 + MLT1G LTR MaLR 3 180 -410 2311 97 7 0 chr5 150392142 150392440 -49237710 + AluSx SINE Alu 1 300 -12 2000 221 65 106 chr5 150392440 150392883 -49237267 + MLT1G LTR MaLR 180 588 -2 442 193 148 30 chr5 150393196 150393331 -49236819 - MIR SINE MIR 0 262 112 1310 98 0 0 chr5 150393443 150393607 -49236543 - AluSx SINE Alu -148 164 1 387 302 31 6 chr5 150393748 150393907 -49236243 + LTR33A LTR ERVL 333 495 -28 2238 127 0 9 chr5 150393908 150394223 -49235927 - AluJb SINE Alu 0 312 1 668 316 66 58 chr5 150394325 150394505 -49235645 + L2 LINE L2 2934 3111 -202 2361 98 3 0 chr5 150394505 150394802 -49235348 - AluSp SINE Alu -15 298 1 668 316 66 58 chr5 150394802 150394998 -49235152 + L2 LINE L2 3111 3313 0 1279 161 9 22 chr5 150395644 150395867 -49234283 - AluJo SINE Alu -8 304 85 1496 145 0 13 chr5 150396393 150396620 -49233530 + AluJb SINE Alu 84 307 -5 298 330 70 20 chr5 150396623 150396823 -49233327 + L2 LINE L2 2850 3059 -213 19752 27 1 0 chr5 150396898 150400004 -49230146 - L1PA4 LINE L1 0 6155 3051 373 323 65 49 chr5 150401627 150401890 -49228260 - L2 LINE L2 0 3313 3047 334 158 122 24 chr5 150401914 150401996 -49228154 + AluJb SINE Alu 213 302 0 216 0 0 0 chr5 150402022 150402046 -49228104 + (TG)n Simple_repeat Simple_repeat 1 24 0 1733 128 128 0 chr5 150402047 150402312 -49227838 - AluSx SINE Alu -3 299 1 278 289 35 64 chr5 150403350 150403523 -49226627 + L2 LINE L2 2553 2720 -594 216 0 0 0 chr5 150403592 150403616 -49226534 + (TTA)n Simple_repeat Simple_repeat 3 26 0 2152 125 0 0 chr5 150403619 150403906 -49226244 - AluSx SINE Alu -25 287 1 205 182 0 45 chr5 150403930 150403974 -49226176 + MIR SINE MIR 108 149 -59 759 214 115 22 chr5 150404318 150404500 -49225650 + MIR SINE MIR 7 205 -57 293 208 32 120 chr5 150404518 150404643 -49225507 + MIR SINE MIR 78 191 -71 1114 171 6 0 chr5 150404970 150405146 -49225004 - MER69A DNA AcHobo 0 177 1 226 224 0 0 chr5 150405927 150405976 -49224174 + (TG)n Simple_repeat Simple_repeat 1 49 0 211 238 48 0 chr5 150406573 150406636 -49223514 + GA-rich Low_complexity Low_complexity 1 66 0 2191 92 0 0 chr5 150406654 150406927 -49223223 + AluSg SINE Alu 1 273 -37 194 0 39 0 chr5 150406945 150406971 -49223179 + (GAA)n Simple_repeat Simple_repeat 2 28 0 988 126 0 0 chr5 150407238 150407373 -49222777 + FLAM_C SINE Alu 9 143 0 431 322 100 34 chr5 150407872 150407925 -49222225 - MIR SINE MIR 0 262 214 1394 214 73 0 chr5 150407925 150408214 -49221936 - AluJo SINE Alu -2 310 1 431 322 100 34 chr5 150408214 150408399 -49221751 - MIR SINE MIR -48 214 8 1160 126 35 0 chr5 150409415 150409589 -49220561 + AluSx SINE Alu 1 180 -132 325 295 76 54 chr5 150410303 150410527 -49219623 + MLT1H LTR MaLR 105 333 -216 776 222 148 20 chr5 150410871 150411074 -49219076 + MIR SINE MIR 34 262 0 360 235 24 12 chr5 150411563 150411648 -49218502 + L2 LINE L2 3227 3312 -1 343 206 20 29 chr5 150412333 150412435 -49217715 - LTR67 LTR ERVL 0 557 457 814 157 8 15 chr5 150412545 150412848 -49217302 - FLAM_C SINE Alu 0 302 1 767 186 0 0 chr5 150412885 150413003 -49217147 + FLAM_C SINE Alu 1 118 -15 239 91 0 23 chr5 150413004 150413048 -49217102 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1957 118 30 0 chr5 150413053 150413323 -49216827 - AluSx SINE Alu -34 278 1 257 176 17 12 chr5 150413354 150413426 -49216724 - MLT1K LTR MaLR -342 246 120 540 139 0 0 chr5 150413763 150413842 -49216308 + AluSg/x SINE Alu 216 294 -16 1216 256 41 39 chr5 150414441 150414741 -49215409 + LTR33 LTR ERVL 27 330 -191 2264 125 0 6 chr5 150414741 150415053 -49215097 + AluSx SINE Alu 3 312 0 1216 256 41 39 chr5 150415053 150415237 -49214913 + LTR33 LTR ERVL 330 512 -9 385 242 211 0 chr5 150416173 150416268 -49213882 - L2 LINE L2 0 3313 3199 2094 98 7 7 chr5 150416298 150416584 -49213566 + AluSx SINE Alu 1 286 -26 477 0 0 0 chr5 150416584 150416637 -49213513 + (CAATA)n Simple_repeat Simple_repeat 2 54 0 614 292 88 5 chr5 150416645 150416888 -49213262 + L2 LINE L2 2784 3043 -270 373 247 13 0 chr5 150417802 150417879 -49212271 - L2 LINE L2 0 3313 3236 1771 173 3 3 chr5 150417945 150418229 -49211921 - AluJb SINE Alu -5 307 24 1737 163 51 0 chr5 150419634 150419910 -49210240 + AluJo SINE Alu 1 290 -22 193 229 0 114 chr5 150419915 150419985 -49210165 + L2 LINE L2 3027 3088 -184 351 276 151 7 chr5 150420008 150420160 -49209990 + MIR SINE MIR 86 259 -3 301 359 130 0 chr5 150420193 150420324 -49209826 + L2 LINE L2 3122 3269 -3 719 322 39 16 chr5 150420352 150420607 -49209543 - MIR SINE MIR 0 262 2 310 309 41 10 chr5 150420670 150420767 -49209383 + L2 LINE L2 3173 3272 0 202 261 18 72 chr5 150421792 150421903 -49208247 - MIR SINE MIR -40 222 118 33 0 0 0 chr5 150422134 150422167 -49207983 + AT_rich Low_complexity Low_complexity 1 33 0 2379 100 0 0 chr5 150422168 150422479 -49207671 - AluSx SINE Alu -1 311 1 1002 175 43 5 chr5 150422481 150422692 -49207458 - AluSg/x SINE Alu -2 308 90 23 0 0 0 chr5 150422789 150422812 -49207338 + GC_rich Low_complexity Low_complexity 1 23 0 1266 153 37 12 chr5 150423096 150423338 -49206812 + AluY SINE Alu 31 278 -33 1215 209 49 14 chr5 150423358 150423645 -49206505 + MLT1C LTR MaLR 171 467 0 782 211 46 0 chr5 150423673 150423825 -49206325 - AluJb SINE Alu -20 292 134 2245 117 0 3 chr5 150423825 150424123 -49206027 - AluSx SINE Alu -14 298 2 2448 88 0 22 chr5 150424157 150424477 -49205673 - AluSq SINE Alu 0 313 1 924 159 0 0 chr5 150424479 150424655 -49205495 - L1MA5 LINE L1 0 6300 6125 952 146 6 76 chr5 150424655 150424826 -49205324 - AluJ SINE Alu -21 291 133 2014 136 3 3 chr5 150424834 150425129 -49205021 - AluSq SINE Alu -18 295 1 4625 135 29 49 chr5 150425197 150425852 -49204298 - L1MA5 LINE L1 -168 6132 5465 1900 158 7 0 chr5 150425852 150426159 -49203991 + AluSx SINE Alu 1 309 0 4625 135 29 49 chr5 150426159 150426510 -49203640 - L1MA5 LINE L1 -835 5465 5108 1912 138 54 43 chr5 150426510 150426879 -49203271 - THE1C LTR MaLR -2 373 1 4625 135 29 49 chr5 150426879 150427056 -49203094 - L1MA5 LINE L1 -1192 5108 4929 733 208 0 0 chr5 150427056 150427186 -49202964 - AluJ SINE Alu -172 130 1 4625 135 29 49 chr5 150427186 150427251 -49202899 - L1MA5 LINE L1 -1371 4929 4922 1333 154 177 27 chr5 150427251 150427511 -49202639 - AluJb SINE Alu -3 299 1 4625 135 29 49 chr5 150427511 150427623 -49202527 - L1MA5 LINE L1 -1378 4922 4809 351 259 71 18 chr5 150427681 150427793 -49202357 + L2 LINE L2 2639 2756 -558 763 167 0 0 chr5 150427825 150427939 -49202211 + AluJb SINE Alu 5 118 -194 1467 149 90 48 chr5 150428017 150428483 -49201667 - AluSx SINE Alu 0 478 1 2892 143 46 65 chr5 150428483 150429439 -49200711 - MER21A LTR ERV1 -19 912 24 181 236 65 81 chr5 150429468 150429591 -49200559 + L2 LINE L2 2886 3006 -307 1950 171 0 16 chr5 150429612 150429928 -49200222 - AluJo SINE Alu -1 311 1 1901 161 3 3 chr5 150430114 150430452 -49199698 + AluJo SINE Alu 1 312 0 1017 70 0 0 chr5 150431028 150431156 -49198994 + AluY SINE Alu 173 300 -11 375 238 67 0 chr5 150431156 150431261 -49198889 - MIR SINE MIR -63 199 88 2014 143 0 44 chr5 150431911 150432226 -49197924 + AluJo SINE Alu 1 301 -11 377 250 62 0 chr5 150432229 150432325 -49197825 - MIR3 SINE MIR -44 164 63 216 0 0 0 chr5 150432997 150433021 -49197129 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2421 95 0 0 chr5 150433061 150433366 -49196784 - AluY SINE Alu -6 305 1 719 254 33 14 chr5 150433372 150433585 -49196565 - L2 LINE L2 -19 3294 3078 888 194 0 42 chr5 150433594 150433785 -49196365 - AluJo SINE Alu -13 299 117 728 192 31 8 chr5 150433814 150433944 -49196206 - AluJo SINE Alu -177 135 3 1981 159 0 0 chr5 150433956 150434251 -49195899 - AluJb SINE Alu -13 299 5 1054 246 92 9 chr5 150434257 150434760 -49195390 - L2 LINE L2 -236 3077 2539 2223 126 7 3 chr5 150434792 150435101 -49195049 + AluSg SINE Alu 1 310 0 445 148 0 0 chr5 150435102 150435163 -49194987 - AluJ/FLAM SINE Alu -250 62 2 1208 276 138 5 chr5 150435879 150436256 -49193894 - L2 LINE L2 0 3313 2887 1036 230 109 46 chr5 150436256 150436695 -49193455 - MLT1L LTR MaLR 0 615 149 554 179 0 0 chr5 150436780 150436864 -49193286 + FRAM/FAM SINE Alu 1 83 -93 340 218 23 0 chr5 150436911 150436998 -49193152 + L1M4 LINE L1 4108 4196 -1950 237 281 37 62 chr5 150437321 150437453 -49192697 + MIR SINE MIR 62 192 -67 1956 97 35 4 chr5 150438410 150438669 -49191481 + AluSx SINE Alu 3 269 -43 387 0 0 0 chr5 150438672 150438715 -49191435 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 243 0 0 0 chr5 150438826 150438853 -49191297 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 1751 183 0 0 chr5 150438853 150439127 -49191023 - AluJb SINE Alu -32 280 7 1901 167 0 7 chr5 150439239 150439538 -49190612 - AluJb SINE Alu -15 297 1 245 314 73 16 chr5 150439538 150439662 -49190488 + L2 LINE L2 3137 3267 -5 653 160 56 0 chr5 150440765 150440890 -49189260 + L1M4 LINE L1 4477 4608 -1538 2055 117 3 7 chr5 150440896 150441201 -49188949 + AluSx SINE Alu 1 304 0 362 252 158 0 chr5 150441231 150441358 -49188792 + L1MCb LINE L1 45 191 -5854 1643 148 107 0 chr5 150441379 150441696 -49188454 + L1MB7 LINE L1 5819 6169 -15 1022 193 0 6 chr5 150442479 150442655 -49187495 - FAM SINE Alu 0 175 1 571 209 75 174 chr5 150442662 150442823 -49187327 + MIR SINE MIR 9 132 -130 2241 116 0 0 chr5 150442823 150443108 -49187042 - AluSg SINE Alu -25 285 1 571 209 75 174 chr5 150443108 150443228 -49186922 + MIR SINE MIR 132 262 0 742 181 16 0 chr5 150443842 150443969 -49186181 + AluJb SINE Alu 2 130 -182 332 232 0 96 chr5 150444579 150444671 -49185479 - L2 LINE L2 -11 3302 3223 1861 169 7 7 chr5 150444671 150444978 -49185172 - AluJo SINE Alu -5 307 1 332 232 0 96 chr5 150444978 150445010 -49185140 - L2 LINE L2 -90 3223 3190 2343 102 0 9 chr5 150445173 150445488 -49184662 + AluSx SINE Alu 1 312 0 2472 103 0 0 chr5 150445546 150445857 -49184293 + AluSx SINE Alu 1 311 -1 1901 111 8 8 chr5 150446121 150446383 -49183767 + AluSx SINE Alu 37 298 -14 703 283 25 5 chr5 150446684 150446882 -49183268 - L2 LINE L2 0 3313 3112 1334 153 0 10 chr5 150446886 150447088 -49183062 + AluJo SINE Alu 1 200 -112 276 120 0 0 chr5 150447093 150447143 -49183007 + (GA)n Simple_repeat Simple_repeat 1 50 0 1050 272 8 45 chr5 150447194 150447345 -49182805 - L2 LINE L2 -269 3044 2889 2160 133 0 3 chr5 150447345 150447647 -49182503 + AluSx SINE Alu 1 301 -11 1050 272 8 45 chr5 150447647 150447865 -49182285 - L2 LINE L2 -424 2889 2686 515 196 27 103 chr5 150447867 150447954 -49182196 + MER3 DNA MER1_type 1 21 -141 734 198 0 0 chr5 150447954 150448080 -49182070 - FLAM_A SINE Alu -3 130 5 515 196 27 103 chr5 150448080 150448176 -49181974 + MER3 DNA MER1_type 21 123 -39 63 14 0 0 chr5 150448179 150448249 -49181901 + AT_rich Low_complexity Low_complexity 1 70 0 253 267 0 0 chr5 150448264 150448324 -49181826 - L2 LINE L2 -624 2690 2631 2294 111 0 16 chr5 150448366 150448546 -49181604 - AluSg SINE Alu 0 310 136 2424 69 0 20 chr5 150448546 150448849 -49181301 - AluY SINE Alu -14 297 1 2294 111 0 16 chr5 150448849 150448983 -49181167 - AluSg SINE Alu -174 136 1 306 0 0 0 chr5 150449001 150449035 -49181115 + (A)n Simple_repeat Simple_repeat 1 34 0 727 274 52 41 chr5 150449035 150449183 -49180967 - L2 LINE L2 -660 2654 2500 1988 160 0 26 chr5 150449183 150449496 -49180654 - AluJb SINE Alu -7 305 1 727 274 52 41 chr5 150449496 150449617 -49180533 - L2 LINE L2 -814 2500 2382 1508 107 5 0 chr5 150449881 150450077 -49180073 - AluSq SINE Alu -116 197 1 558 230 115 70 chr5 150450440 150450640 -49179510 + MIR SINE MIR 48 256 -6 2211 118 0 13 chr5 150450901 150451216 -49178934 - AluSp SINE Alu -2 311 1 373 231 189 42 chr5 150452243 150452386 -49177764 + MIR SINE MIR 12 175 -87 980 133 0 0 chr5 150452430 150452565 -49177585 + AluJo SINE Alu 1 135 -177 2076 232 33 17 chr5 150452567 150453069 -49177081 - MLT1G LTR MaLR -60 524 18 2257 105 23 3 chr5 150453069 150453373 -49176777 - AluSx SINE Alu -2 310 1 1766 183 0 10 chr5 150453429 150453719 -49176431 + AluJb SINE Alu 19 305 -7 844 131 0 0 chr5 150453756 150453878 -49176272 + FLAM_C SINE Alu 22 143 0 646 132 44 171 chr5 150454919 150454983 -49175167 - MLT1F LTR MaLR 0 567 497 2424 82 3 0 chr5 150454983 150455276 -49174874 - AluSc SINE Alu -15 294 1 646 132 44 171 chr5 150455276 150455334 -49174816 - MLT1F LTR MaLR -70 497 479 2300 119 3 0 chr5 150455334 150455646 -49174504 + AluSq SINE Alu 1 313 0 646 132 44 171 chr5 150455646 150455727 -49174423 - MLT1F LTR MaLR -88 479 389 341 237 8 68 chr5 150455744 150455862 -49174288 + LTR16C LTR ERVL 100 210 -281 925 208 167 75 chr5 150455944 150456116 -49174034 - MLT1F LTR MaLR -172 370 215 2440 85 0 0 chr5 150456116 150456409 -49173741 - AluY SINE Alu -18 293 1 925 208 167 75 chr5 150456409 150456554 -49173596 - MLT1F LTR MaLR -327 215 24 441 222 14 111 chr5 150456667 150456811 -49173339 + L2 LINE L2 3133 3262 -10 247 150 33 17 chr5 150457266 150457326 -49172824 - MLT1K LTR MaLR -4 584 524 369 279 85 40 chr5 150457354 150457555 -49172595 + LTR16C LTR ERVL 1 210 -281 328 191 21 85 chr5 150457604 150457698 -49172452 + LTR16C LTR ERVL 213 300 -191 2206 125 3 3 chr5 150457743 150458054 -49172096 - AluSx SINE Alu -1 311 1 548 158 114 9 chr5 150458118 150458232 -49171918 + LTR16C LTR ERVL 366 491 0 219 187 13 27 chr5 150458538 150458613 -49171537 + GA-rich Low_complexity Low_complexity 2 75 0 1099 105 0 0 chr5 150458742 150458885 -49171265 + AluSq/x SINE Alu 1 143 -170 2202 113 0 3 chr5 150458886 150459179 -49170971 + AluSg SINE Alu 1 292 -18 1878 176 10 0 chr5 150461317 150461607 -49168543 - AluJo SINE Alu -19 293 1 309 308 133 66 chr5 150462757 150462968 -49167182 + L2 LINE L2 2969 3193 -79 260 230 40 0 chr5 150463171 150463245 -49166905 + L1ME4a LINE L1 6015 6091 -30 21 36 0 0 chr5 150463385 150463413 -49166737 + AT_rich Low_complexity Low_complexity 1 28 0 2316 94 0 13 chr5 150463424 150463722 -49166428 + AluSx SINE Alu 1 294 -18 2349 91 7 0 chr5 150463797 150464095 -49166055 + AluSx SINE Alu 1 300 -12 1026 244 12 4 chr5 150464115 150464373 -49165777 - LTR16B LTR ERVL -13 451 192 1942 126 13 68 chr5 150464375 150464443 -49165707 + L1MB3 LINE L1 5764 5834 -347 2322 96 3 3 chr5 150464443 150464744 -49165406 - AluSq SINE Alu -12 301 1 1942 126 13 68 chr5 150464744 150464910 -49165240 + L1MB3 LINE L1 5834 6008 -173 1604 122 0 4 chr5 150464910 150465139 -49165011 + AluSg/x SINE Alu 85 312 0 1942 126 13 68 chr5 150465139 150465194 -49164956 + L1MB3 LINE L1 6008 6064 -117 2206 95 3 14 chr5 150465194 150465507 -49164643 - AluSp SINE Alu 0 313 1 1942 126 13 68 chr5 150465507 150465674 -49164476 + L1MB3 LINE L1 6064 6173 -8 351 317 99 59 chr5 150465681 150465883 -49164267 - LTR16B LTR ERVL -252 212 3 709 304 36 14 chr5 150465888 150466108 -49164042 + MIR SINE MIR 4 228 -34 1758 125 78 25 chr5 150466108 150466389 -49163761 + AluSx SINE Alu 1 296 -16 259 341 164 0 chr5 150466443 150466657 -49163493 - MIR SINE MIR -10 252 4 2153 135 0 6 chr5 150466707 150467018 -49163132 - AluSx SINE Alu -3 309 1 261 172 0 0 chr5 150467066 150467130 -49163020 + (CAT)n Simple_repeat Simple_repeat 1 64 0 253 359 145 0 chr5 150467764 150467895 -49162255 - L2 LINE L2 0 3272 3123 1116 249 80 18 chr5 150468167 150468505 -49161645 - L2 LINE L2 -20 3293 2935 225 308 119 32 chr5 150468504 150468689 -49161461 - L2 LINE L2 -494 2820 2620 * 2342 92 0 0 chr5 150468719 150469011 -49161139 + AluSc SINE Alu 1 292 -17 434 213 104 83 chr5 150469553 150469600 -49160550 + L2 LINE L2 2827 2872 -400 2447 74 0 3 chr5 150469600 150469897 -49160253 - AluY SINE Alu -15 296 1 434 213 104 83 chr5 150469897 150469947 -49160203 + L2 LINE L2 2872 2919 -353 1648 152 52 62 chr5 150469947 150470256 -49159894 - AluJb SINE Alu -6 306 1 434 213 104 83 chr5 150470256 150470397 -49159753 + L2 LINE L2 2919 3071 -201 216 0 0 0 chr5 150470596 150470620 -49159530 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 2259 110 6 28 chr5 150470620 150470938 -49159212 - AluSx SINE Alu -1 311 1 270 331 149 0 chr5 150471003 150471124 -49159026 + L2 LINE L2 3134 3272 0 322 286 103 24 chr5 150471199 150471325 -49158825 + L2 LINE L2 3137 3272 0 1728 159 7 36 chr5 150471344 150471653 -49158497 + AluJb SINE Alu 1 300 -12 2719 38 0 13 chr5 150471693 150472008 -49158142 - AluY SINE Alu 0 311 1 413 173 92 108 chr5 150472015 150472058 -49158092 + L2 LINE L2 2890 2932 -340 1610 153 55 62 chr5 150472058 150472366 -49157784 - AluJb SINE Alu -6 306 1 413 173 92 108 chr5 150472366 150472507 -49157643 + L2 LINE L2 2932 3071 -201 296 279 19 56 chr5 150472656 150472730 -49157420 + L2 LINE L2 2827 2902 -411 2115 142 0 3 chr5 150472730 150473040 -49157110 - AluSx SINE Alu -3 309 1 296 279 19 56 chr5 150473040 150473126 -49157024 + L2 LINE L2 2902 2981 -332 822 327 16 7 chr5 150473244 150473547 -49156603 + L2 LINE L2 1237 1542 -1772 268 328 62 23 chr5 150473556 150473684 -49156466 + L2 LINE L2 1648 1780 -1534 919 181 78 0 chr5 150473689 150473855 -49156295 - AluJb SINE Alu 0 312 134 788 255 171 28 chr5 150473855 150474212 -49155938 + L2 LINE L2 1774 2181 -1133 901 190 0 0 chr5 150474216 150474358 -49155792 - AluSg/x SINE Alu -20 290 149 511 169 0 0 chr5 150474358 150474435 -49155715 + AluS SINE Alu 2 78 -234 619 77 58 0 chr5 150474505 150474609 -49155541 + AluSp/q SINE Alu 200 309 -4 253 281 101 0 chr5 150476131 150476220 -49153930 - L2 LINE L2 -215 3057 2960 443 236 68 43 chr5 150476761 150476922 -49153228 + MIR3 SINE MIR 3 167 -41 2197 107 0 25 chr5 150477700 150478017 -49152133 + AluSq SINE Alu 1 309 -4 312 203 0 0 chr5 150478219 150478278 -49151872 - AluJ/FLAM SINE Alu -242 60 2 2192 112 3 0 chr5 150478329 150478623 -49151527 - AluSg SINE Alu -15 295 1 1845 216 54 84 chr5 150478624 150479118 -49151032 + L1M4 LINE L1 3619 4126 -2020 2188 117 0 7 chr5 150479118 150479409 -49150741 + AluSq SINE Alu 3 291 -22 1845 216 54 84 chr5 150479409 150479512 -49150638 + L1M4 LINE L1 4126 4231 -1915 2181 132 3 0 chr5 150479512 150479816 -49150334 - AluSq SINE Alu -7 306 2 1845 216 54 84 chr5 150479816 150480045 -49150105 + L1M4 LINE L1 4231 4421 -1725 209 185 0 37 chr5 150480324 150480378 -49149772 + A-rich Low_complexity Low_complexity 2 53 0 2034 134 7 3 chr5 150480686 150480978 -49149172 - AluSx SINE Alu -19 293 1 308 226 37 18 chr5 150483005 150483169 -49146981 + (TA)n Simple_repeat Simple_repeat 2 168 0 236 29 0 29 chr5 150483241 150483275 -49146875 + (TA)n Simple_repeat Simple_repeat 1 33 0 272 146 49 12 chr5 150483290 150483372 -49146778 + (TATAA)n Simple_repeat Simple_repeat 5 89 0 337 248 55 71 chr5 150483372 150483642 -49146508 - L1MC4 LINE L1 -1339 6983 1819 323 193 97 61 chr5 150483700 150483814 -49146336 - L1MC4 LINE L1 -1339 6703 6586 231 260 24 16 chr5 150484020 150484143 -49146007 + (TA)n Simple_repeat Simple_repeat 2 125 0 28 0 0 0 chr5 150484215 150484243 -49145907 + AT_rich Low_complexity Low_complexity 1 28 0 2276 99 0 0 chr5 150484259 150484542 -49145608 + AluSx SINE Alu 12 294 -18 32 81 0 0 chr5 150484613 150484687 -49145463 + AT_rich Low_complexity Low_complexity 1 74 0 258 156 0 0 chr5 150485314 150485359 -49144791 - SUBTEL_sa Satellite Satellite -129 45 1 266 306 69 12 chr5 150485363 150485536 -49144614 - L1MEc LINE L1 -3384 3156 2974 1400 220 22 0 chr5 150485536 150485804 -49144346 - AluJo SINE Alu -38 274 1 1363 241 54 60 chr5 150485888 150486391 -49143759 - LTR53 LTR ERVL 0 519 20 692 235 48 44 chr5 150486402 150486902 -49143248 - L1MEc LINE L1 -3753 2787 2234 347 227 17 118 chr5 150487608 150487727 -49142423 - L2 LINE L2 -33 3239 3133 891 218 158 67 chr5 150487842 150487985 -49142165 + MLT1F LTR MaLR 26 154 -388 2189 84 0 10 chr5 150487985 150488281 -49141869 + AluY SINE Alu 1 293 -18 891 218 158 67 chr5 150488281 150488453 -49141697 + MLT1F LTR MaLR 154 370 -172 368 252 23 61 chr5 150488535 150488666 -49141484 - LTR16C LTR ERVL -281 210 85 437 104 58 234 chr5 150488670 150488762 -49141388 + MLT1F LTR MaLR 364 420 -122 1217 121 6 115 chr5 150488762 150489100 -49141050 - AluSq SINE Alu 0 303 3 437 104 58 234 chr5 150489100 150489161 -49140989 + MLT1F LTR MaLR 420 490 -52 1221 65 0 50 chr5 150489161 150489360 -49140790 + AluSc SINE Alu 1 189 -120 1738 183 30 30 chr5 150490039 150490406 -49139744 + L1MB3 LINE L1 5699 6065 -118 654 176 8 16 chr5 150490407 150490532 -49139618 + FLAM_A SINE Alu 1 124 -9 1690 175 0 7 chr5 150490553 150490850 -49139300 - AluJo SINE Alu -12 300 6 548 112 0 82 chr5 150490871 150490969 -49139181 + L1MB3 LINE L1 6053 6142 -41 27 49 0 0 chr5 150490985 150491026 -49139124 + AT_rich Low_complexity Low_complexity 1 41 0 26 0 0 0 chr5 150491112 150491138 -49139012 + AT_rich Low_complexity Low_complexity 1 26 0 1893 107 0 0 chr5 150491139 150491400 -49138750 - AluSq SINE Alu -52 261 1 947 175 6 0 chr5 150491402 150491562 -49138588 - AluJb SINE Alu -18 294 134 957 138 7 7 chr5 150491648 150491800 -49138350 - AluJb SINE Alu -14 298 147 267 191 0 0 chr5 150491859 150491922 -49138228 + (CA)n Simple_repeat Simple_repeat 1 63 0 1951 89 21 11 chr5 150492367 150492692 -49137458 - AluSq SINE Alu 0 328 1 1591 139 4 4 chr5 150492828 150493080 -49137070 - AluSq SINE Alu -4 309 58 948 162 7 0 chr5 150493480 150493634 -49136516 + AluJo SINE Alu 84 238 -74 22 43 0 21 chr5 150493642 150493667 -49136483 + AT_rich Low_complexity Low_complexity 1 26 -20 1657 157 51 0 chr5 150493667 150493941 -49136209 + AluJo SINE Alu 1 288 -24 22 43 0 21 chr5 150493941 150493962 -49136188 + AT_rich Low_complexity Low_complexity 26 46 0 243 0 0 0 chr5 150494221 150494248 -49135902 + (T)n Simple_repeat Simple_repeat 1 27 0 1892 110 8 0 chr5 150494417 150494681 -49135469 - AluSx SINE Alu -8 304 39 1658 122 66 7 chr5 150495056 150495327 -49134823 - AluJb SINE Alu -25 287 1 517 250 54 71 chr5 150495331 150495451 -49134699 - MIR SINE MIR -74 188 71 1733 140 31 7 chr5 150495451 150495743 -49134407 - AluJb SINE Alu -13 299 1 517 250 54 71 chr5 150495743 150495806 -49134344 - MIR SINE MIR -191 71 8 1575 110 41 85 chr5 150496224 150496541 -49133609 + AluJo SINE Alu 5 307 -5 26 0 0 0 chr5 150496827 150496853 -49133297 + AT_rich Low_complexity Low_complexity 1 26 0 887 100 0 15 chr5 150497056 150497186 -49132964 - AluSq/x SINE Alu -184 128 1 3377 195 5 0 chr5 150497596 150498251 -49131899 + L1 LINE L1 3713 4370 -1776 7087 53 15 0 chr5 150498255 150500226 -49129924 + L1PA7 LINE L1 4182 6150 -4 548 282 40 35 chr5 150500810 150501037 -49129113 - L2 LINE L2 -401 2913 2686 551 196 27 103 chr5 150501039 150501126 -49129024 + MER3 DNA MER1_type 1 21 -141 717 198 0 0 chr5 150501126 150501252 -49128898 - FLAM_A SINE Alu -3 130 5 551 196 27 103 chr5 150501252 150501348 -49128802 + MER3 DNA MER1_type 21 123 -39 207 191 44 0 chr5 150501355 150501423 -49128727 + (TTAA)n Simple_repeat Simple_repeat 1 71 0 224 222 0 37 chr5 150501440 150501494 -49128656 - L2 LINE L2 -624 2690 2639 229 167 24 0 chr5 150501495 150501537 -49128613 + MER50 LTR ERV1 500 542 -192 1153 145 0 0 chr5 150501546 150501725 -49128425 - AluSg/x SINE Alu 0 310 132 2074 86 3 23 chr5 150501726 150502030 -49128120 - AluY SINE Alu -13 298 1 1469 130 0 50 chr5 150502335 150502636 -49127514 - AluSg SINE Alu -24 286 1 1609 176 0 17 chr5 150502636 150502937 -49127213 - AluJb SINE Alu -14 298 3 307 73 24 0 chr5 150502983 150503024 -49127126 + 5S rRNA rRNA 1 42 -79 713 205 8 0 chr5 150503083 150503205 -49126945 + FLAM_A SINE Alu 1 123 -10 640 278 68 24 chr5 150504489 150504741 -49125409 + L1MDa LINE L1 66 328 -6212 2103 249 106 15 chr5 150504911 150505188 -49124962 + L1MDa LINE L1 852 1103 -5437 1464 184 3 49 chr5 150505188 150505515 -49124635 + AluJo SINE Alu 1 312 0 2103 249 106 15 chr5 150505515 150506395 -49123755 + L1MDa LINE L1 1103 2161 -4379 193 312 18 46 chr5 150506880 150506989 -49123161 - L2 LINE L2 -987 2327 2222 735 107 116 16 chr5 150507069 150507190 -49122960 - FLAM_C SINE Alu 0 133 1 499 280 63 7 chr5 150507450 150507593 -49122557 + MIR SINE MIR 42 192 -70 2901 139 106 22 chr5 150507597 150507656 -49122494 - Tigger2 DNA MER2_type 0 2718 2665 2094 107 14 0 chr5 150507656 150507945 -49122205 + AluSg SINE Alu 1 293 -17 2901 139 106 22 chr5 150507945 150508488 -49121662 - Tigger2 DNA MER2_type -53 2665 2065 1767 137 14 7 chr5 150508729 150509006 -49121144 + MER50 LTR ERV1 433 711 -23 292 254 0 0 chr5 150509010 150509065 -49121085 + FLAM SINE Alu 71 125 -8 236 328 107 8 chr5 150509322 150509453 -49120697 + MIR SINE MIR 3 146 -116 251 287 210 19 chr5 150509485 150509642 -49120508 - MIR SINE MIR -54 208 22 832 196 46 27 chr5 150509792 150510011 -49120139 - MER96B DNA MER1_type? -3 414 192 2510 42 0 10 chr5 150510085 150510398 -49119752 + AluY SINE Alu 1 310 -1 4195 240 71 47 chr5 150510398 150511062 -49119088 + L1MDa LINE L1 2675 3321 -3219 1658 153 28 17 chr5 150511062 150511350 -49118800 + AluJb SINE Alu 1 291 -21 4195 240 71 47 chr5 150511350 150512408 -49117742 + L1MDa LINE L1 3321 4439 -2101 831 111 8 16 chr5 150512508 150512634 -49117516 + AluJb SINE Alu 162 286 -26 1800 116 40 4 chr5 150512744 150513054 -49117096 - AluSq SINE Alu 0 320 1 1066 151 0 6 chr5 150513347 150513519 -49116631 - AluSc SINE Alu -35 274 104 263 305 21 0 chr5 150515600 150515695 -49114455 + L2 LINE L2 3216 3312 -1 2464 69 2 54 chr5 150516443 150516849 -49113301 - L1PA5 LINE L1 0 6154 5770 453 157 36 0 chr5 150516852 150516935 -49113215 - MER70-int LTR ERVL -550 4473 4388 2116 124 0 0 chr5 150518196 150518503 -49111647 - AluSg SINE Alu -3 307 1 681 203 147 6 chr5 150518805 150518968 -49111182 + AluSg/x SINE Alu 119 304 -6 886 83 23 8 chr5 150519515 150519648 -49110502 + AluSx SINE Alu 30 164 -148 448 193 148 30 chr5 150519760 150519895 -49110255 + MIR SINE MIR 112 262 0 1905 244 43 5 chr5 150520208 150520651 -49109499 - MLT1G LTR MaLR -2 588 129 2285 87 0 0 chr5 150520651 150520949 -49109201 - AluSg SINE Alu -12 298 1 211 238 48 0 chr5 150520967 150521030 -49109120 + CT-rich Low_complexity Low_complexity 1 66 0 226 224 0 0 chr5 150521627 150521676 -49108474 + (CA)n Simple_repeat Simple_repeat 1 49 0 1875 139 0 0 chr5 150522175 150522455 -49107695 - AluSx SINE Alu -32 280 1 290 87 0 0 chr5 150522459 150522505 -49107645 - L1PA13 LINE L1 -129 6034 5989 * 1716 148 17 119 chr5 150522502 150522649 -49107501 + L1PA16 LINE L1 5769 5929 -237 3145 105 2 2 chr5 150522649 150523096 -49107054 - L1PA7 LINE L1 0 6154 5708 1716 148 17 119 chr5 150523096 150523367 -49106783 + L1PA16 LINE L1 5929 6144 -22 362 160 26 18 chr5 150523371 150523466 -49106684 + L1PA16 LINE L1 5610 5703 -458 1395 120 58 4 chr5 150523483 150523725 -49106425 - AluSx SINE Alu -28 284 30 1186 171 23 5 chr5 150523751 150523968 -49106182 + L1PA16 LINE L1 5697 5917 -249 883 161 7 7 chr5 150523973 150524128 -49106022 + L1PA16 LINE L1 5764 5918 -248 942 164 0 6 chr5 150524129 150524288 -49105862 + L1PA16 LINE L1 5762 5919 -247 842 163 12 12 chr5 150524288 150524448 -49105702 + L1PA16 LINE L1 5762 5921 -245 * 1295 179 14 11 chr5 150524445 150524874 -49105276 + L1PA16 LINE L1 5718 6033 -133 2272 91 0 0 chr5 150524979 150525276 -49104874 - AluSx SINE Alu -13 299 3 543 177 32 8 chr5 150525411 150525535 -49104615 + L1PA16 LINE L1 6040 6166 0 212 198 0 12 chr5 150526918 150526999 -49103151 + (TG)n Simple_repeat Simple_repeat 1 80 0 289 315 7 7 chr5 150527044 150527187 -49102963 + (TG)n Simple_repeat Simple_repeat 1 143 0 1116 133 0 0 chr5 150527199 150527365 -49102785 - AluSg/x SINE Alu -13 297 132 2172 95 0 3 chr5 150527365 150527660 -49102490 - AluSx SINE Alu -18 294 1 425 288 0 6 chr5 150527663 150527826 -49102324 + (TG)n Simple_repeat Simple_repeat 2 163 0 457 147 13 0 chr5 150528110 150528185 -49101965 - MER39 LTR ERV1 -373 334 259 * 935 124 11 70 chr5 150528161 150528347 -49101803 - MER21A LTR ERV1 -733 198 24 1791 171 0 16 chr5 150528520 150528836 -49101314 - AluJo SINE Alu -1 311 1 1757 161 3 3 chr5 150529022 150529360 -49100790 + AluJo SINE Alu 1 312 0 958 70 0 0 chr5 150529936 150530064 -49100086 + AluY SINE Alu 173 300 -11 371 238 67 0 chr5 150530064 150530169 -49099981 - MIR SINE MIR -63 199 88 1857 143 0 44 chr5 150530819 150531134 -49099016 + AluJo SINE Alu 1 301 -11 371 250 62 0 chr5 150531137 150531233 -49098917 - MIR3 SINE MIR -44 164 63 28 0 0 0 chr5 150532075 150532103 -49098047 + AT_rich Low_complexity Low_complexity 1 28 0 797 77 10 0 chr5 150532121 150532225 -49097925 - AluSp/q SINE Alu -45 268 164 1715 69 5 0 chr5 150532225 150532441 -49097709 - AluSp SINE Alu -96 217 1 187 206 254 0 chr5 150532442 150532505 -49097645 + MIR SINE MIR 61 139 -123 200 342 145 8 chr5 150532509 150532583 -49097567 - L2 LINE L2 -208 3064 3001 2082 106 7 0 chr5 150532583 150532875 -49097275 + AluSx SINE Alu 2 295 -17 200 342 145 8 chr5 150532875 150532917 -49097233 - L2 LINE L2 -271 3001 2932 300 295 98 0 chr5 150532975 150533087 -49097063 + MIR SINE MIR 140 262 0 285 238 99 20 chr5 150533089 150533190 -49096960 - MIR SINE MIR -67 141 49 390 42 0 0 chr5 150533195 150533243 -49096907 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 952 129 7 0 chr5 150533263 150533403 -49096747 - AluSg/x SINE Alu -18 292 152 254 233 41 27 chr5 150533507 150533571 -49096579 - MLT1H LTR MaLR -352 197 130 1595 165 46 11 chr5 150533571 150533856 -49096294 + AluJb SINE Alu 1 295 -17 287 252 126 19 chr5 150533865 150533968 -49096182 + MIR SINE MIR 31 144 -118 2042 107 7 23 chr5 150533974 150534282 -49095868 + AluSq SINE Alu 1 303 -10 409 272 46 27 chr5 150534420 150534585 -49095565 - MIR3 SINE MIR -25 183 16 643 210 48 27 chr5 150534592 150534799 -49095351 + MIR SINE MIR 38 250 -12 252 304 20 81 chr5 150534830 150534872 -49095278 + MIR SINE MIR 121 164 -98 2240 106 0 0 chr5 150534872 150535174 -49094976 + AluSx SINE Alu 1 302 -10 252 304 20 81 chr5 150535174 150535279 -49094871 + MIR SINE MIR 164 259 -3 324 98 0 0 chr5 150535288 150535359 -49094791 - Alu SINE Alu 0 313 243 188 250 0 0 chr5 150536131 150536175 -49093975 + MIR SINE MIR 150 193 -69 288 338 29 15 chr5 150536236 150536372 -49093778 + MIR3 SINE MIR 13 150 -58 313 185 46 0 chr5 150536592 150536657 -49093493 - MIR3 SINE MIR -27 181 114 1498 146 109 22 chr5 150536739 150537032 -49093118 + AluJo SINE Alu 1 290 -22 197 212 182 45 chr5 150537039 150537105 -49093045 + MIR SINE MIR 112 186 -76 221 239 11 87 chr5 150537693 150537785 -49092365 - MIR3 SINE MIR -15 193 109 197 164 0 73 chr5 150537822 150537877 -49092273 + L2 LINE L2 334 384 -2930 223 186 47 0 chr5 150538092 150538135 -49092015 - MIR3 SINE MIR -50 158 114 1069 183 6 0 chr5 150538335 150538515 -49091635 + FRAM SINE Alu 1 173 -3 2249 107 0 16 chr5 150538690 150539000 -49091150 - AluY SINE Alu -6 305 1 205 182 0 45 chr5 150539024 150539068 -49091082 + MIR SINE MIR 108 149 -59 759 214 115 22 chr5 150539412 150539594 -49090556 + MIR SINE MIR 7 205 -57 293 208 32 120 chr5 150539612 150539737 -49090413 + MIR SINE MIR 78 191 -71 1114 171 6 0 chr5 150540064 150540240 -49089910 - MER69A DNA AcHobo 0 177 1 604 91 0 70 chr5 150540693 150540997 -49089153 + (GCTG)n Simple_repeat Simple_repeat 1 282 0 808 50 0 70 chr5 150541058 150541518 -49088632 + (GCTG)n Simple_repeat Simple_repeat 1 427 0 714 83 0 73 chr5 150541532 150542133 -49088017 + (GCTG)n Simple_repeat Simple_repeat 1 557 0 766 70 0 69 chr5 150542151 150542739 -49087411 + (GCTG)n Simple_repeat Simple_repeat 1 547 0 206 250 37 28 chr5 150542871 150542979 -49087171 + (GCTTG)n Simple_repeat Simple_repeat 5 113 0 412 283 40 0 chr5 150543630 150543782 -49086368 + (CCCTAG)n Simple_repeat Simple_repeat 3 160 0 198 150 0 90 chr5 150543822 150543989 -49086161 + (CCCTG)n Simple_repeat Simple_repeat 5 156 0 262 261 79 6 chr5 150544045 150544210 -49085940 + (CCCTAG)n Simple_repeat Simple_repeat 2 178 0 * 263 208 0 96 chr5 150544100 150544278 -49085872 + (CCCTG)n Simple_repeat Simple_repeat 1 161 0 341 298 54 0 chr5 150544417 150544585 -49085565 + (CTAGGG)n Simple_repeat Simple_repeat 1 177 0 372 234 32 11 chr5 150544794 150544888 -49085262 - MIR SINE MIR -75 187 92 1903 110 0 8 chr5 150544890 150545145 -49085005 + AluJb SINE Alu 17 269 -43 399 228 188 0 chr5 150545145 150545246 -49084904 + L2 LINE L2 3193 3312 -1 505 300 92 50 chr5 150546523 150546545 -49083605 + MIR SINE MIR 13 33 -229 2090 122 30 0 chr5 150546545 150546840 -49083310 + AluSg SINE Alu 1 304 -6 505 300 92 50 chr5 150546840 150546994 -49083156 + MIR SINE MIR 33 204 -58 2359 87 3 16 chr5 150546994 150547304 -49082846 + AluSc SINE Alu 2 307 -2 505 300 92 50 chr5 150547304 150547366 -49082784 + MIR SINE MIR 204 262 0 788 204 52 17 chr5 150547466 150547638 -49082512 + MER5B DNA MER1_type 1 178 0 1748 143 10 37 chr5 150548025 150548348 -49081802 - AluSx SINE Alu 0 312 1 300 127 0 0 chr5 150548354 150548409 -49081741 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 * 522 83 0 0 chr5 150548396 150548468 -49081682 + (TC)n Simple_repeat Simple_repeat 1 72 0 247 204 0 0 chr5 150548468 150548522 -49081628 - AluJ/monomer SINE Alu -1 300 247 763 90 0 0 chr5 150548522 150548622 -49081528 - AluYb8 SINE Alu -201 117 18 2003 123 27 14 chr5 150548626 150548919 -49081231 + AluSx SINE Alu 1 297 -15 914 314 54 40 chr5 150549281 150549559 -49080591 - L2 LINE L2 -4 3309 3021 2534 78 3 0 chr5 150549559 150549867 -49080283 + AluY SINE Alu 1 309 -2 914 314 54 40 chr5 150549867 150550015 -49080135 - L2 LINE L2 -292 3021 2877 662 294 30 65 chr5 150550098 150550465 -49079685 + L2 LINE L2 2216 2569 -745 1127 278 63 57 chr5 150550605 150550679 -49079471 - L2 LINE L2 0 3313 3241 2118 138 3 0 chr5 150550679 150550976 -49079174 + AluSx SINE Alu 1 298 -14 1127 278 63 57 chr5 150550976 150551071 -49079079 - L2 LINE L2 -72 3241 3148 1680 147 127 29 chr5 150551071 150551378 -49078772 - MER1B DNA MER1_type 0 337 1 1127 278 63 57 chr5 150551378 150551456 -49078694 - L2 LINE L2 -165 3148 3072 1874 180 0 10 chr5 150551456 150551762 -49078388 - AluJo SINE Alu -9 303 1 1127 278 63 57 chr5 150551762 150552057 -49078093 - L2 LINE L2 -241 3072 2739 1288 134 30 35 chr5 150552061 150552292 -49077858 - L1PA15 LINE L1 0 6165 5936 300 326 96 15 chr5 150552426 150552561 -49077589 + L2 LINE L2 2686 2831 -483 2136 205 122 109 chr5 150552680 150553210 -49076940 - L2 LINE L2 -39 3274 2752 2475 61 3 0 chr5 150553210 150553504 -49076646 - AluY SINE Alu -16 295 1 2136 205 122 109 chr5 150553504 150553682 -49076468 - L2 LINE L2 -561 2752 2578 2348 89 3 10 chr5 150553682 150553984 -49076166 + AluSx SINE Alu 1 300 -12 2136 205 122 109 chr5 150553984 150554224 -49075926 - L2 LINE L2 -735 2578 2327 1456 189 27 43 chr5 150554224 150554525 -49075625 + AluJo SINE Alu 1 296 -16 2136 205 122 109 chr5 150554525 150554738 -49075412 - L2 LINE L2 -986 2327 2118 226 261 31 31 chr5 150554695 150554760 -49075390 - L3 LINE CR1 -933 644 580 * 1765 99 0 22 chr5 150554765 150554859 -49075291 - AluSx SINE Alu -85 227 132 2117 119 34 0 chr5 150554859 150555153 -49074997 - AluSq SINE Alu -9 304 1 1765 99 0 22 chr5 150555153 150555290 -49074860 - AluSx SINE Alu -180 132 1 1788 175 93 21 chr5 150555304 150555397 -49074753 - Charlie1b DNA MER1_type -2253 508 423 1736 178 3 16 chr5 150555397 150555701 -49074449 + AluJo SINE Alu 1 300 -12 1788 175 93 21 chr5 150555701 150556081 -49074069 - Charlie1b DNA MER1_type -2338 423 1 1097 240 55 7 chr5 150556081 150556356 -49073794 - L2 LINE L2 -1190 2124 1837 1704 176 3 19 chr5 150556451 150556471 -49073679 - AluJb SINE Alu -10 302 283 324 48 0 0 chr5 150556471 150556513 -49073637 + (TG)n Simple_repeat Simple_repeat 2 43 0 1704 176 3 19 chr5 150556513 150556799 -49073351 - AluJb SINE Alu -29 283 1 263 355 40 32 chr5 150556802 150556926 -49073224 + L2 LINE L2 3122 3246 -26 459 147 0 118 chr5 150557060 150557091 -49073059 + MER45A DNA AcHobo 40 73 -1508 2457 94 0 0 chr5 150557091 150557422 -49072728 + AluSc SINE Alu 1 309 0 459 147 0 118 chr5 150557422 150557492 -49072658 + MER45A DNA AcHobo 73 129 -49 1981 165 67 50 chr5 150557607 150557675 -49072475 - MSTA LTR MaLR 0 428 363 1913 97 101 50 chr5 150557675 150557973 -49072177 + AluSq SINE Alu 1 313 0 1981 165 67 50 chr5 150557973 150558145 -49072005 - MSTA LTR MaLR -65 363 195 1929 130 0 46 chr5 150558145 150558303 -49071847 - AluJb SINE Alu -19 293 154 2067 119 20 3 chr5 150558303 150558596 -49071554 - AluSq SINE Alu -15 298 1 1929 130 0 46 chr5 150558596 150558744 -49071406 - AluJb SINE Alu -158 154 1 1981 165 67 50 chr5 150558744 150558921 -49071229 - MSTA LTR MaLR -233 195 3 230 259 12 47 chr5 150558933 150559018 -49071132 - L2 LINE L2 -276 2996 2915 1857 145 24 7 chr5 150559060 150559350 -49070800 - AluJb SINE Alu -13 299 5 282 330 161 0 chr5 150559458 150559576 -49070574 - L2 LINE L2 -3 3269 3133 214 57 75 57 chr5 150559780 150559833 -49070317 + T-rich Low_complexity Low_complexity 2 55 0 944 119 30 2 chr5 150560041 150560278 -49069872 + AluJo SINE Alu 11 296 -16 234 256 64 13 chr5 150560292 150560370 -49069780 + MIR3 SINE MIR 116 197 -11 215 290 206 0 chr5 150560373 150560480 -49069670 + MIR3 SINE MIR 39 167 -41 23 33 0 0 chr5 150560861 150560891 -49069259 + GC_rich Low_complexity Low_complexity 1 30 0 262 111 0 32 chr5 150560928 150560991 -49069159 + (CGGGGG)n Simple_repeat Simple_repeat 3 63 0 27 49 0 0 chr5 150561165 150561206 -49068944 + GC_rich Low_complexity Low_complexity 1 41 0 28 61 0 0 chr5 150561440 150561489 -49068661 + GC_rich Low_complexity Low_complexity 1 49 0 1819 160 14 0 chr5 150562345 150562632 -49067518 - AluJo SINE Alu -21 291 1 238 292 45 11 chr5 150562825 150562914 -49067236 - L2 LINE L2 -189 3083 2992 250 313 42 10 chr5 150563259 150563355 -49066795 + L2 LINE L2 2271 2369 -945 2024 132 0 16 chr5 150563424 150563603 -49066547 - AluSx SINE Alu 0 312 132 270 0 0 0 chr5 150563603 150563633 -49066517 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1789 124 37 7 chr5 150563633 150563906 -49066244 - AluSg SINE Alu -29 281 1 2024 132 0 16 chr5 150563906 150564036 -49066114 - AluSx SINE Alu -178 134 7 214 303 198 53 chr5 150564129 150564452 -49065698 - L2 LINE L2 -327 2945 2588 1660 180 24 14 chr5 150564492 150564787 -49065363 + AluJb SINE Alu 1 298 -14 180 111 0 0 chr5 150564787 150564814 -49065336 + (GGAA)n Simple_repeat Simple_repeat 1 27 0 565 160 173 26 chr5 150564815 150564971 -49065179 + L1MB3 LINE L1 5953 6131 -52 579 139 0 0 chr5 150564972 150565058 -49065092 + FRAM SINE Alu 75 160 -16 227 262 145 69 chr5 150565226 150565371 -49064779 + L2 LINE L2 3115 3270 -2 1353 126 5 0 chr5 150565569 150565760 -49064390 - AluSp SINE Alu 0 313 122 1348 103 0 15 chr5 150565767 150565945 -49064205 - AluY SINE Alu -2 309 133 2365 98 3 0 chr5 150565945 150566250 -49063900 - AluSc SINE Alu -3 306 1 1348 103 0 15 chr5 150566250 150566266 -49063884 - AluY SINE Alu -178 133 118 4421 162 41 47 chr5 150566268 150566384 -49063766 - L1M4c LINE L1 -5393 991 876 2204 109 17 0 chr5 150566384 150566677 -49063473 - AluSp SINE Alu -14 299 2 4421 162 41 47 chr5 150566677 150567554 -49062596 - L1M4c LINE L1 -5508 876 4 2587 70 3 0 chr5 150567557 150567869 -49062281 - AluSp SINE Alu 0 313 1 492 102 0 153 chr5 150567869 150567947 -49062203 - L1MB2 LINE L1 -341 5830 5774 2032 122 14 17 chr5 150567947 150568241 -49061909 - AluSx SINE Alu -19 293 1 492 102 0 153 chr5 150568241 150568280 -49061870 - L1MB2 LINE L1 -397 5774 5731 238 278 100 11 chr5 150568858 150568893 -49061257 + L1ME1 LINE L1 6049 6079 -87 1941 137 24 7 chr5 150568893 150569185 -49060965 - AluSx SINE Alu -15 297 1 238 278 100 11 chr5 150569185 150569239 -49060911 + L1ME1 LINE L1 6079 6146 -20 1895 154 0 7 chr5 150569414 150569712 -49060438 - AluJb SINE Alu -16 296 1 1156 194 10 10 chr5 150571093 150571299 -49058851 - AluJo SINE Alu -106 206 1 2194 115 20 0 chr5 150571565 150571870 -49058280 + AluSx SINE Alu 1 311 -1 1359 96 0 0 chr5 150571871 150572038 -49058112 + AluSp SINE Alu 132 298 -15 2340 102 3 0 chr5 150572124 150572427 -49057723 - AluSp SINE Alu -9 304 1 1945 119 16 39 chr5 150572525 150572694 -49057456 - AluSx SINE Alu -8 304 144 2480 80 3 0 chr5 150572694 150572996 -49057154 - AluSx SINE Alu -9 303 1 1945 119 16 39 chr5 150572996 150573137 -49057013 - AluSx SINE Alu -168 144 1 2553 73 0 3 chr5 150573325 150573628 -49056522 + AluSc SINE Alu 2 303 -6 287 316 172 19 chr5 150573769 150573978 -49056172 - L2 LINE L2 -108 3164 2924 2452 66 3 7 chr5 150574689 150574992 -49055158 - AluY SINE Alu -9 302 1 232 307 150 12 chr5 150575278 150575532 -49054618 - L1MC4 LINE L1 -1 8041 7753 379 285 208 0 chr5 150575544 150575674 -49054476 + MER5A DNA MER1_type 8 164 -25 363 265 233 11 chr5 150575760 150575916 -49054234 - L1MC4 LINE L1 -371 7671 7551 1865 147 3 17 chr5 150575916 150576208 -49053942 - AluSx SINE Alu -15 297 10 363 265 233 11 chr5 150576208 150576221 -49053929 - L1MC4 LINE L1 -491 7551 7542 811 253 6 0 chr5 150576221 150576395 -49053755 - FAM SINE Alu 0 175 1 363 265 233 11 chr5 150576395 150576507 -49053643 - L1MC4 LINE L1 -500 7542 7326 935 127 7 0 chr5 150576705 150576847 -49053303 - FLAM_C SINE Alu 0 143 1 32 0 0 0 chr5 150577000 150577032 -49053118 + AT_rich Low_complexity Low_complexity 1 32 0 957 125 0 0 chr5 150577035 150577171 -49052979 - AluSg/x SINE Alu -3 309 174 2286 67 3 3 chr5 150577174 150577488 -49052662 - AluSp SINE Alu 0 314 1 2006 93 48 4 chr5 150577494 150577788 -49052362 - AluSq SINE Alu 0 308 3 692 274 206 29 chr5 150578133 150578326 -49051824 + L2 LINE L2 2829 2987 -326 2551 62 3 0 chr5 150578326 150578632 -49051518 + AluY SINE Alu 2 308 -3 692 274 206 29 chr5 150578632 150578846 -49051304 + L2 LINE L2 2987 3308 -5 1459 176 37 51 chr5 150579025 150579320 -49050830 - AluJo SINE Alu 0 312 22 190 244 64 26 chr5 150580426 150580504 -49049646 - MIR3 SINE MIR -15 193 113 * 424 301 72 18 chr5 150580501 150580667 -49049483 - MIR3 SINE MIR -15 193 19 411 245 217 30 chr5 150580778 150581057 -49049093 - L2 LINE L2 -95 3218 2863 1899 147 3 36 chr5 150581293 150581457 -49048693 - AluJo SINE Alu -15 297 146 2201 121 3 3 chr5 150581457 150581763 -49048387 - AluSx SINE Alu -6 306 1 1899 147 3 36 chr5 150581763 150581905 -49048245 - AluJo SINE Alu -166 146 1 463 256 103 65 chr5 150581925 150582209 -49047941 + Charlie8 DNA MER1_type 41 52 -289 2403 39 43 0 chr5 150582209 150582489 -49047661 - AluY SINE Alu -19 292 1 463 256 103 65 chr5 150582489 150582663 -49047487 + Charlie8 DNA MER1_type 52 218 -123 500 213 155 17 chr5 150583114 150583288 -49046862 - L1MC4 LINE L1 -241 7801 7604 2439 86 0 16 chr5 150583291 150583606 -49046544 - AluY SINE Alu -1 310 1 3045 30 3 0 chr5 150583624 150583955 -49046195 - SVA Other Other 0 1386 1055 418 216 170 12 chr5 150584506 150584677 -49045473 - L1MC4 LINE L1 -241 7801 7604 2110 85 20 16 chr5 150584680 150584986 -49045164 - AluY SINE Alu -4 307 1 9757 27 3 218 chr5 150585002 150586753 -49043397 - SVA Other Other 0 1386 12 2365 82 0 7 chr5 150586882 150587187 -49042963 - AluY SINE Alu -8 303 1 1971 195 98 15 chr5 150587188 150587707 -49042443 - L1MC4 LINE L1 -470 7572 7011 2150 130 0 0 chr5 150587780 150588072 -49042078 - AluSx SINE Alu -20 292 1 420 240 145 20 chr5 150588075 150588387 -49041763 - L1MC4 LINE L1 -782 7242 6873 760 159 0 0 chr5 150588442 150588555 -49041595 - FLAM_C SINE Alu -24 119 7 1617 111 4 4 chr5 150588601 150588826 -49041324 - AluSg/x SINE Alu -4 308 84 276 297 72 14 chr5 150588847 150589069 -49041081 - L1ME LINE L1 -295 5826 5592 2315 84 3 13 chr5 150589075 150589386 -49040764 - AluY SINE Alu -3 308 1 2325 93 6 6 chr5 150589396 150589709 -49040441 - AluSp SINE Alu 0 313 1 1796 102 0 4 chr5 150639712 150639967 -48990183 + AluSx SINE Alu 59 312 0 1324 282 39 7 chr5 150639980 150640392 -48989758 + MER57B LTR ERV1 10 434 0 3843 170 99 21 chr5 150640620 150641247 -48988903 + L1MB3 LINE L1 4980 5557 -626 2115 119 0 3 chr5 150641247 150641558 -48988592 + AluSg SINE Alu 1 310 0 3843 170 99 21 chr5 150641558 150641760 -48988390 + L1MB3 LINE L1 5557 5742 -441 1518 186 0 18 chr5 150641760 150641897 -48988253 + AluJo SINE Alu 1 132 -180 1768 138 0 7 chr5 150641897 150642166 -48987984 + AluSx SINE Alu 44 310 -2 1518 186 0 18 chr5 150642166 150642308 -48987842 + AluJo SINE Alu 132 275 -37 3843 170 99 21 chr5 150642308 150642599 -48987551 + L1MB3 LINE L1 5742 6183 0 2373 72 3 3 chr5 150642692 150642999 -48987151 + AluSc SINE Alu 1 307 -2 2305 74 0 0 chr5 150643207 150643517 -48986633 - AluY SINE Alu 0 310 1 1925 103 0 56 chr5 150643531 150643686 -48986464 - AluSx SINE Alu -27 285 154 2628 42 0 0 chr5 150643686 150643997 -48986153 - AluY SINE Alu 0 311 1 1925 103 0 56 chr5 150643997 150644143 -48986007 - AluSx SINE Alu -158 154 1 1556 119 99 44 chr5 150644160 150644453 -48985697 - AluSx SINE Alu -3 309 1 265 170 0 0 chr5 150644535 150644582 -48985568 - AluJo/FRAM SINE Alu -66 236 190 990 186 16 71 chr5 150644582 150644834 -48985316 - AluJo SINE Alu -74 238 1 2167 108 3 0 chr5 150644903 150645200 -48984950 + AluSg SINE Alu 3 300 -10 1874 134 3 3 chr5 150645211 150645522 -48984628 + AluSx SINE Alu 1 311 0 474 182 0 0 chr5 150645606 150645683 -48984467 + BC200 scRNA scRNA 65 141 -59 2028 120 7 0 chr5 150645701 150646002 -48984148 + AluSq SINE Alu 2 304 -9 1889 147 7 3 chr5 150646011 150646311 -48983839 + AluSx SINE Alu 1 301 -11 207 0 0 0 chr5 150646723 150646746 -48983404 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2141 87 17 0 chr5 150647575 150647863 -48982287 - AluY SINE Alu -18 293 1 2265 79 7 0 chr5 150647894 150648197 -48981953 + AluSp SINE Alu 1 305 -8 2226 92 0 0 chr5 150648197 150648491 -48981659 + AluSc SINE Alu 1 294 -15 1836 101 0 66 chr5 150648556 150648874 -48981276 + AluSx SINE Alu 1 297 -15 471 273 80 53 chr5 150648910 150649086 -48981064 - MIR SINE MIR -68 194 11 2208 109 0 0 chr5 150649086 150649389 -48980761 - AluSx SINE Alu -9 303 1 2174 89 0 0 chr5 150650133 150650425 -48979725 - AluSc SINE Alu -17 292 1 2204 111 0 0 chr5 150650946 150651253 -48978897 - AluSx SINE Alu -5 307 1 21 0 0 0 chr5 150651414 150651435 -48978715 + AT_rich Low_complexity Low_complexity 1 21 0 222 248 30 99 chr5 150651670 150651723 -48978427 - MIR SINE MIR -64 198 154 1880 153 0 3 chr5 150651723 150652031 -48978119 - AluJb SINE Alu -5 307 1 222 248 30 99 chr5 150652031 150652078 -48978072 - MIR SINE MIR -108 154 105 1757 112 62 0 chr5 150653806 150654064 -48976086 + AluSx SINE Alu 1 274 -38 473 215 158 38 chr5 150654189 150654347 -48975803 - MER5A DNA MER1_type -2 187 11 246 331 215 8 chr5 150654414 150654544 -48975606 - MER5A DNA MER1_type -26 163 7 2108 105 7 0 chr5 150655161 150655455 -48974695 - AluSx SINE Alu -16 296 1 644 122 148 9 chr5 150655472 150655587 -48974563 + FLAM_A SINE Alu 3 133 0 2009 102 39 0 chr5 150655590 150655873 -48974277 - AluSq SINE Alu -19 294 1 233 29 29 0 chr5 150656992 150657026 -48973124 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 39 22 0 0 chr5 150657083 150657129 -48973021 + AT_rich Low_complexity Low_complexity 1 46 0 218 242 267 12 chr5 150657134 150657295 -48972855 + MIR SINE MIR 6 207 -55 250 219 0 0 chr5 150657301 150657342 -48972808 + AluJo SINE Alu 1 41 -261 2207 95 3 3 chr5 150657342 150657648 -48972502 - AluSx SINE Alu -1 311 6 1461 161 11 15 chr5 150657648 150657921 -48972229 + AluJo SINE Alu 27 298 -14 281 241 36 24 chr5 150661387 150661470 -48968680 - MIR SINE MIR -92 170 87 442 251 93 22 chr5 150662170 150662353 -48967797 + MER117 DNA MER1_type 2 197 0 1000 221 106 74 chr5 150663305 150663497 -48966653 - L1MC4a LINE L1 -1643 6165 5981 647 93 31 0 chr5 150663497 150663594 -48966556 - L1PA8 LINE L1 -1 6171 6072 1000 221 106 74 chr5 150663594 150663665 -48966485 - L1MC4a LINE L1 -1827 5981 5914 2277 88 3 0 chr5 150663665 150663962 -48966188 + AluSp SINE Alu 1 298 -15 2218 113 0 0 chr5 150663964 150664273 -48965877 + AluSg SINE Alu 2 310 0 1000 221 106 74 chr5 150664273 150664447 -48965703 - L1MC4a LINE L1 -1894 5914 5702 2234 103 0 3 chr5 150664447 150664759 -48965391 + AluSx SINE Alu 1 311 -1 1000 221 106 74 chr5 150664759 150664854 -48965296 - L1MC4a LINE L1 -2106 5702 5611 211 325 149 9 chr5 150665012 150665126 -48965024 - L2 LINE L2 -18 3295 3166 490 275 121 33 chr5 150665774 150666014 -48964136 + MIR SINE MIR 2 262 0 483 180 11 11 chr5 150666958 150667047 -48963103 - MER81 DNA DNA 0 114 26 296 225 0 79 chr5 150667443 150667532 -48962618 - L2 LINE L2 -54 3259 3178 2292 65 3 0 chr5 150667564 150667854 -48962296 + AluY SINE Alu 2 292 -19 458 261 54 0 chr5 150672165 150672276 -48957874 + L2 LINE L2 3193 3309 -4 208 293 6 24 chr5 150673960 150674124 -48956026 + (CGG)n Simple_repeat Simple_repeat 2 162 0 1035 287 87 27 chr5 150677169 150677754 -48952396 - L1MC4a LINE L1 -1870 5938 5319 2258 72 0 13 chr5 150677858 150678165 -48951985 - AluSc SINE Alu -6 303 1 1444 149 127 0 chr5 150678239 150678507 -48951643 - AluJo SINE Alu -10 302 1 1745 164 14 3 chr5 150678588 150678881 -48951269 - AluJb SINE Alu -16 296 1 1643 97 146 0 chr5 150678926 150679207 -48950943 - AluSq SINE Alu 0 318 2 1895 94 60 0 chr5 150679213 150679502 -48950648 - AluSq SINE Alu 0 306 2 2141 93 10 13 chr5 150679516 150679828 -48950322 - AluSx SINE Alu -1 311 1 829 155 27 0 chr5 150679828 150679966 -48950184 - AluJo/FRAM SINE Alu -16 296 152 246 95 0 0 chr5 150679983 150680025 -48950125 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 3107 34 0 0 chr5 150680025 150680383 -48949767 - L1PA3 LINE L1 -10 6145 5788 1960 135 0 0 chr5 150680383 150680680 -48949470 - AluSx SINE Alu -11 301 5 810 173 0 0 chr5 150680696 150680829 -48949321 - FLAM_C SINE Alu 0 133 1 288 0 0 0 chr5 150681745 150681777 -48948373 + (TG)n Simple_repeat Simple_repeat 1 32 0 2078 90 6 62 chr5 150681793 150682114 -48948036 - AluSx SINE Alu -9 303 1 387 214 84 109 chr5 150683121 150683259 -48946891 + LTR48 LTR ERV1 1 141 -503 1852 90 16 4 chr5 150683259 150683514 -48946636 + AluSx SINE Alu 1 258 -54 387 214 84 109 chr5 150683514 150683700 -48946450 + LTR48 LTR ERV1 141 357 -287 243 0 0 0 chr5 150683773 150683800 -48946350 + (CA)n Simple_repeat Simple_repeat 2 28 0 70 43 0 9 chr5 150683886 150683954 -48946196 + AT_rich Low_complexity Low_complexity 1 69 -46 1226 33 26 0 chr5 150683954 150684105 -48946045 - L1PA5 LINE L1 -3 6151 5997 70 43 0 9 chr5 150684105 150684152 -48945998 + AT_rich Low_complexity Low_complexity 69 115 0 335 216 99 77 chr5 150684156 150684335 -48945815 + LTR48B LTR ERV1 404 631 -13 184 224 40 92 chr5 150684420 150684496 -48945654 + L2 LINE L2 3047 3118 -195 2172 91 0 0 chr5 150684760 150685057 -48945093 - AluY SINE Alu -14 297 1 1896 139 0 19 chr5 150685120 150685430 -48944720 - AluSx SINE Alu -8 304 1 552 250 122 16 chr5 150685851 150686039 -48944111 - MIR SINE MIR -6 256 49 2033 124 10 0 chr5 150686462 150686769 -48943381 - AluSq SINE Alu -3 310 1 28 29 0 0 chr5 150686893 150686928 -48943222 + AT_rich Low_complexity Low_complexity 1 35 0 2046 114 10 0 chr5 150686930 150687227 -48942923 + AluSx SINE Alu 3 302 -10 346 254 37 45 chr5 150687322 150687456 -48942694 - L1MC4a LINE L1 -1914 5894 5762 1856 146 13 10 chr5 150687534 150687843 -48942307 - AluJo SINE Alu -2 310 1 28 29 0 0 chr5 150688672 150688707 -48941443 + AT_rich Low_complexity Low_complexity 1 35 0 2318 81 0 0 chr5 150688948 150689243 -48940907 + AluSg SINE Alu 5 299 -11 1852 154 0 35 chr5 150689433 150689751 -48940399 - AluJo SINE Alu -1 311 5 270 320 77 21 chr5 150691028 150691222 -48938928 - MIR SINE MIR -50 212 8 2221 117 7 0 chr5 150692018 150692318 -48937832 - AluSq SINE Alu -11 302 1 1964 149 17 0 chr5 150692389 150692684 -48937466 + AluJo SINE Alu 1 300 -12 788 179 0 0 chr5 150692895 150693012 -48937138 + FLAM_C SINE Alu 2 118 -15 38 0 0 0 chr5 150693015 150693053 -48937097 + AT_rich Low_complexity Low_complexity 1 38 0 1730 150 40 0 chr5 150693053 150693326 -48936824 + AluJb SINE Alu 1 284 -28 295 352 48 8 chr5 150693475 150693600 -48936550 + L2 LINE L2 3139 3268 -4 2014 147 3 6 chr5 150694268 150694580 -48935570 + AluJb SINE Alu 1 311 -1 1701 133 9 67 chr5 150694681 150694996 -48935154 - AluJb SINE Alu -15 297 1 22 56 0 0 chr5 150695109 150695145 -48935005 + AT_rich Low_complexity Low_complexity 1 36 0 1946 112 4 4 chr5 150695193 150695461 -48934689 - AluSx SINE Alu 0 312 45 2124 103 17 3 chr5 150695467 150695768 -48934382 - AluY SINE Alu -6 305 1 2248 75 0 3 chr5 150696566 150696889 -48933261 - AluY SINE Alu 0 322 1 2223 115 0 7 chr5 150696891 150697187 -48932963 - AluSq SINE Alu -18 295 2 1691 171 41 3 chr5 150697196 150697489 -48932661 - AluSx SINE Alu -8 304 1 2472 75 3 3 chr5 150697634 150697941 -48932209 + AluY SINE Alu 1 307 -4 402 195 115 0 chr5 150698460 150698547 -48931603 + MER103 DNA DNA 2 98 -68 911 167 12 36 chr5 150698629 150698797 -48931353 - FRAM SINE Alu -12 164 1 35 0 0 0 chr5 150699176 150699211 -48930939 + AT_rich Low_complexity Low_complexity 1 35 0 284 75 30 30 chr5 150699983 150700050 -48930100 + (TA)n Simple_repeat Simple_repeat 1 67 0 279 358 9 9 chr5 150701004 150701113 -48929037 + MIR SINE MIR 41 149 -113 1681 161 4 0 chr5 150701244 150701498 -48928652 - AluJb SINE Alu -57 255 1 207 94 47 47 chr5 150701508 150701572 -48928578 + (TA)n Simple_repeat Simple_repeat 1 64 0 501 274 128 17 chr5 150701572 150701930 -48928220 - L1ME4a LINE L1 -158 5963 5566 713 123 105 0 chr5 150701960 150702074 -48928076 - FLAM_C SINE Alu -7 126 1 2317 106 7 3 chr5 150702082 150702385 -48927765 - AluSq SINE Alu -9 304 1 351 213 116 92 chr5 150702519 150702683 -48927467 - L2 LINE L2 -1 3312 3145 2187 113 3 16 chr5 150703376 150703687 -48926463 + AluSx SINE Alu 1 307 -5 620 119 174 0 chr5 150703884 150703993 -48926157 - FLAM_C SINE Alu -5 128 1 2316 103 0 13 chr5 150704338 150704649 -48925501 - AluSg SINE Alu -1 309 3 1986 100 4 4 chr5 150704920 150705181 -48924969 + AluSq SINE Alu 43 303 -10 2320 60 40 17 chr5 150705185 150705484 -48924666 + AluY SINE Alu 1 306 -5 2218 115 0 19 chr5 150705528 150705666 -48924484 + AluSx SINE Alu 1 140 -172 2276 120 0 7 chr5 150705666 150705975 -48924175 + AluSq SINE Alu 1 307 -6 2218 115 0 19 chr5 150705975 150706150 -48924000 + AluSx SINE Alu 140 308 -4 2083 109 3 3 chr5 150706223 150706532 -48923618 - AluSq SINE Alu 0 309 1 1606 96 5 5 chr5 150706532 150706741 -48923409 - AluSc SINE Alu -100 209 1 2503 76 0 0 chr5 150709010 150709314 -48920836 + AluY SINE Alu 1 304 -7 1261 132 0 6 chr5 150709543 150709559 -48920591 + AluSg/x SINE Alu 120 135 -177 2540 57 0 35 chr5 150709559 150709876 -48920274 + AluY SINE Alu 1 306 -5 1261 132 0 6 chr5 150709876 150710041 -48920109 + AluSg/x SINE Alu 135 300 -12 757 198 12 6 chr5 150710652 150710814 -48919336 - L1MB5 LINE L1 0 6174 6012 23 0 0 0 chr5 150710921 150710944 -48919206 + AT_rich Low_complexity Low_complexity 1 23 0 194 0 39 0 chr5 150710969 150710995 -48919155 + (TC)n Simple_repeat Simple_repeat 2 28 0 * 297 0 0 0 chr5 150710994 150711027 -48919123 + (TG)n Simple_repeat Simple_repeat 2 34 0 2259 95 0 3 chr5 150711078 150711372 -48918778 - AluSc SINE Alu -16 293 1 213 351 132 21 chr5 150713583 150713908 -48916242 - L3b LINE CR1 -8 1575 1215 3116 232 117 124 chr5 150715179 150715335 -48914815 - L2 LINE L2 -4 3309 3153 1602 168 52 4 chr5 150715335 150715603 -48914547 + AluJb SINE Alu 18 298 -14 3116 232 117 124 chr5 150715603 150716698 -48913452 - L2 LINE L2 -160 3153 2051 745 187 0 0 chr5 150716698 150716821 -48913329 + FLAM_C SINE Alu 5 127 -16 3116 232 117 124 chr5 150716821 150716837 -48913313 - L2 LINE L2 -1262 2051 2036 2185 116 0 3 chr5 150716837 150717130 -48913020 - AluSx SINE Alu -19 293 2 3116 232 117 124 chr5 150717130 150717321 -48912829 - L2 LINE L2 -1277 2036 1845 2464 52 17 0 chr5 150717321 150717608 -48912542 - AluY SINE Alu -19 292 1 3116 232 117 124 chr5 150717608 150718117 -48912033 - L2 LINE L2 -1468 1845 1334 1672 188 0 41 chr5 150718117 150718262 -48911888 + AluJo SINE Alu 1 150 -162 2307 90 0 16 chr5 150718262 150718572 -48911578 + AluY SINE Alu 1 305 -6 1672 188 0 41 chr5 150718572 150718740 -48911410 + AluJo SINE Alu 150 301 -11 3116 232 117 124 chr5 150718740 150718767 -48911383 - L2 LINE L2 -1979 1334 1308 2038 108 0 77 chr5 150718767 150719090 -48911060 + AluSx SINE Alu 1 298 -14 3116 232 117 124 chr5 150719090 150719159 -48910991 - L2 LINE L2 -2005 1308 1138 2452 79 0 0 chr5 150720097 150720402 -48909748 - AluY SINE Alu -6 305 1 2308 87 0 0 chr5 150720472 150720759 -48909391 + AluSg SINE Alu 1 287 -23 803 184 49 12 chr5 150721442 150721605 -48908545 - AluJb SINE Alu -5 307 139 856 167 81 32 chr5 150721610 150721680 -48908470 - L1MB7 LINE L1 0 6184 6119 1674 175 14 14 chr5 150721680 150721966 -48908184 + AluJo SINE Alu 1 286 -26 856 167 81 32 chr5 150721966 150722116 -48908034 - L1MB7 LINE L1 -65 6119 5953 403 169 6 3 chr5 150722144 150722209 -48907941 - L1MB8 LINE L1 -201 5977 5909 2517 74 0 0 chr5 150722209 150722506 -48907644 + AluSg SINE Alu 1 297 -13 403 169 6 3 chr5 150722506 150722531 -48907619 - L1MB8 LINE L1 -269 5909 5886 261 175 18 18 chr5 150722541 150722598 -48907552 - L1MEc LINE L1 -5678 718 662 2806 165 24 36 chr5 150722599 150723136 -48907014 - L1MB8 LINE L1 -278 5900 5369 1751 195 16 0 chr5 150723136 150723443 -48906707 - AluJo SINE Alu 0 312 1 2806 165 24 36 chr5 150723443 150723487 -48906663 - L1MB8 LINE L1 -809 5369 5326 527 296 45 6 chr5 150723642 150723821 -48906329 + MIR SINE MIR 75 260 -2 918 289 21 3 chr5 150723826 150724113 -48906037 + L1ME1 LINE L1 39 330 -6066 1174 262 60 57 chr5 150724290 150724613 -48905537 + L1ME1 LINE L1 613 934 -5462 2334 105 0 3 chr5 150724613 150724926 -48905224 + AluSq SINE Alu 1 312 -1 821 158 0 15 chr5 150724932 150725065 -48905085 + FLAM_C SINE Alu 2 132 -1 1174 262 60 57 chr5 150725065 150725520 -48904630 + L1ME1 LINE L1 938 1400 -4996 2269 109 3 3 chr5 150725565 150725869 -48904281 + AluSp SINE Alu 1 304 -9 1983 123 6 52 chr5 150725937 150726262 -48903888 - AluSx SINE Alu -2 310 1 2239 105 3 0 chr5 150726268 150726562 -48903588 - AluSg SINE Alu -15 295 1 959 201 6 0 chr5 150726575 150726744 -48903406 + AluJb SINE Alu 130 299 -13 1839 206 67 14 chr5 150726766 150727285 -48902865 + L1ME1 LINE L1 1651 2197 -4199 1783 175 10 3 chr5 150727286 150727578 -48902572 + AluJo SINE Alu 1 294 -18 2171 105 31 10 chr5 150727583 150727877 -48902273 + AluSq SINE Alu 1 300 -13 418 236 21 86 chr5 150727951 150727999 -48902151 + L1ME1 LINE L1 3324 3374 -2841 654 208 8 15 chr5 150727999 150728129 -48902021 + FLAM_A SINE Alu 5 133 0 418 236 21 86 chr5 150728129 150728203 -48901947 + L1ME1 LINE L1 3374 3451 -2764 2279 116 0 0 chr5 150728203 150728505 -48901645 - AluSx SINE Alu -10 302 1 418 236 21 86 chr5 150728505 150728614 -48901536 + L1ME1 LINE L1 3451 3541 -2674 1074 124 5 60 chr5 150728620 150728805 -48901345 + LTR9 LTR ERV1 438 612 0 1508 103 0 0 chr5 150728898 150729102 -48901048 + HUERS-P3 LTR ERV1 8715 8918 -1 2734 142 93 43 chr5 150729102 150729608 -48900542 + LTR9 LTR ERV1 1 531 -81 1229 233 48 41 chr5 150729624 150730041 -48900109 + L1ME1 LINE L1 3544 3963 -2252 831 196 20 30 chr5 150730079 150730278 -48899872 + MER106A DNA MER1_type 38 234 -2 2634 185 84 139 chr5 150730294 150730644 -48899506 + L1ME1 LINE L1 4096 4464 -1751 376 153 0 0 chr5 150730644 150730703 -48899447 + AluSg/x SINE Alu 174 232 -68 2634 185 84 139 chr5 150730703 150730855 -48899295 + L1ME1 LINE L1 4464 4623 -1592 846 167 0 0 chr5 150730855 150730981 -48899169 + FLAM_C SINE Alu 1 126 -7 2634 185 84 139 chr5 150730981 150731021 -48899129 + L1ME1 LINE L1 4623 4664 -1551 2368 89 10 13 chr5 150731021 150731335 -48898815 + AluSp SINE Alu 1 313 0 2634 185 84 139 chr5 150731335 150731733 -48898417 + L1ME1 LINE L1 4664 5083 -1132 8220 56 7 4 chr5 150731733 150732737 -48897413 - LTR13 LTR ERVK 0 1007 1 2634 185 84 139 chr5 150732737 150732910 -48897240 + L1ME1 LINE L1 5083 5264 -951 2051 136 0 37 chr5 150732910 150733234 -48896916 - AluSx SINE Alu 0 312 1 2634 185 84 139 chr5 150733234 150733278 -48896872 + L1ME1 LINE L1 5264 5248 -967 2425 75 3 0 chr5 150733278 150733571 -48896579 + AluSq SINE Alu 1 294 -19 2634 185 84 139 chr5 150733571 150733593 -48896557 + L1ME1 LINE L1 5247 5269 -946 1748 182 7 10 chr5 150733597 150733899 -48896251 + AluJb SINE Alu 3 303 -9 468 210 0 40 chr5 150733902 150734002 -48896148 + FLAM_A SINE Alu 1 96 -46 631 188 54 0 chr5 150734044 150734156 -48895994 - FLAM_C SINE Alu -20 123 6 3106 188 50 64 chr5 150734173 150734328 -48895822 + L1ME1 LINE L1 5394 5550 -685 2087 131 7 0 chr5 150734328 150734625 -48895525 + AluY SINE Alu 1 299 -12 3106 188 50 64 chr5 150734625 150734847 -48895303 + L1ME1 LINE L1 5550 5774 -461 1799 142 61 10 chr5 150734847 150735143 -48895007 - AluJb SINE Alu -1 311 1 3106 188 50 64 chr5 150735143 150735399 -48894751 + L1ME1 LINE L1 5774 6016 -219 2439 65 0 0 chr5 150735399 150735689 -48894461 - AluY SINE Alu -21 290 1 3106 188 50 64 chr5 150735689 150735897 -48894253 + L1ME1 LINE L1 6016 6225 -10 1747 173 7 13 chr5 150735897 150736203 -48893947 + AluJb SINE Alu 1 304 -8 246 62 0 0 chr5 150736601 150736633 -48893517 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1602 161 3 42 chr5 150736689 150736974 -48893176 - AluJo SINE Alu -38 274 1 771 163 0 22 chr5 150737168 150737303 -48892847 + FLAM_C SINE Alu 1 132 -1 2316 112 3 0 chr5 150737532 150737835 -48892315 + AluSx SINE Alu 1 304 -8 2013 137 3 3 chr5 150738060 150738345 -48891805 - AluSx SINE Alu -27 285 1 522 318 25 25 chr5 150738434 150738673 -48891477 + MIR SINE MIR 4 242 -20 2136 138 0 0 chr5 150739300 150739604 -48890546 - AluSx SINE Alu -8 304 1 344 260 20 0 chr5 150739793 150739893 -48890257 - MIR SINE MIR 0 262 161 278 247 13 0 chr5 150739968 150740045 -48890105 + L2 LINE L2 3231 3308 -5 2328 83 10 3 chr5 150740598 150740898 -48889252 + AluY SINE Alu 1 302 -9 334 146 0 4 chr5 150740898 150740956 -48889194 - L1MC4 LINE L1 -1339 6983 2006 * 438 20 0 0 chr5 150740945 150740996 -48889154 + (CA)n Simple_repeat Simple_repeat 2 52 0 327 321 53 23 chr5 150741035 150741103 -48889047 + MER5B DNA MER1_type 41 105 -73 2220 89 0 29 chr5 150741103 150741416 -48888734 - AluSp SINE Alu -9 304 1 327 321 53 23 chr5 150741416 150741478 -48888672 + MER5B DNA MER1_type 105 175 -3 485 238 119 7 chr5 150741487 150741630 -48888520 + MER5A DNA MER1_type 1 167 -19 332 325 80 12 chr5 150741495 150741658 -48888492 - MER5A DNA MER1_type -15 174 1 * 1551 249 56 110 chr5 150742501 150743550 -48886600 + L2 LINE L2 2307 3313 0 1965 137 3 10 chr5 150743583 150743890 -48886260 + AluSx SINE Alu 1 305 -7 2067 94 7 24 chr5 150744178 150744475 -48885675 - AluSx SINE Alu -20 292 1 256 271 46 15 chr5 150744654 150744771 -48885379 + MIR SINE MIR 64 150 -58 1713 138 44 11 chr5 150745734 150746035 -48884115 + AluSx SINE Alu 1 310 0 21 36 0 0 chr5 150746921 150746949 -48883201 + AT_rich Low_complexity Low_complexity 1 28 0 1737 157 14 0 chr5 150746954 150747254 -48882896 + AluSx SINE Alu 1 304 0 2362 75 0 3 chr5 150747521 150747826 -48882324 + AluY SINE Alu 1 304 -7 1943 99 99 0 chr5 150747837 150748121 -48882029 + AluSx SINE Alu 1 312 0 2208 80 3 40 chr5 150749414 150749738 -48880412 - AluSx SINE Alu 0 312 1 334 298 43 43 chr5 150750070 150750175 -48879975 - L1ME4a LINE L1 -15 6106 5999 754 180 8 0 chr5 150750175 150750303 -48879847 - FLAM_A SINE Alu 0 133 5 334 298 43 43 chr5 150750303 150750338 -48879812 - L1ME4a LINE L1 -121 6000 5966 1670 116 0 0 chr5 150750354 150750579 -48879571 - AluSx SINE Alu -87 225 1 252 217 116 0 chr5 150751434 150751503 -48878647 - HUERS-P1 LTR ERV1 -3349 2914 2838 2246 67 3 3 chr5 150751845 150752130 -48878020 + AluSp SINE Alu 11 295 -18 291 236 0 11 chr5 150752240 150752329 -48877821 - L1ME4a LINE L1 -104 6017 5930 913 111 0 65 chr5 150752332 150752485 -48877665 - FLAM_C SINE Alu 0 143 1 1230 107 6 6 chr5 150752983 150753160 -48876990 + AluSg/x SINE Alu 126 302 -10 737 149 41 0 chr5 150753163 150753284 -48876866 - FLAM_C SINE Alu -9 134 9 1785 115 0 8 chr5 150753657 150753918 -48876232 + AluSc SINE Alu 43 301 -8 2030 71 0 0 chr5 150754019 150754271 -48875879 - AluY SINE Alu -59 252 1 2091 110 0 10 chr5 150754332 150754633 -48875517 - AluSg SINE Alu -5 305 8 1898 141 7 7 chr5 150754637 150754936 -48875214 - AluSx SINE Alu -13 299 1 2070 113 0 3 chr5 150754974 150755267 -48874883 - AluSx SINE Alu -20 292 1 742 196 42 14 chr5 150755335 150755478 -48874672 + FRAM SINE Alu 1 146 -30 2327 80 0 0 chr5 150755495 150755794 -48874356 + AluSg SINE Alu 1 299 -11 639 231 55 81 chr5 150755794 150756067 -48874083 + L2 LINE L2 3045 3310 -3 507 193 41 55 chr5 150756499 150756644 -48873506 + MIR SINE MIR 118 260 -2 22 0 0 0 chr5 150758130 150758152 -48871998 + AT_rich Low_complexity Low_complexity 1 22 0 1478 134 52 59 chr5 150759368 150759658 -48870492 + AluJo SINE Alu 7 294 -18 555 316 36 0 chr5 150759819 150760012 -48870138 + MIR SINE MIR 41 240 -22 38 22 0 0 chr5 150760175 150760220 -48869930 + GC_rich Low_complexity Low_complexity 1 45 0 255 175 0 0 chr5 150760314 150760371 -48869779 + (CTG)n Simple_repeat Simple_repeat 2 58 0 36 23 0 0 chr5 150760393 150760436 -48869714 + GC_rich Low_complexity Low_complexity 1 43 0 2153 95 7 13 chr5 150762871 150763175 -48866975 + AluSx SINE Alu 2 303 -9 354 205 62 62 chr5 150763217 150763329 -48866821 + MIR SINE MIR 37 148 -114 2171 79 0 40 chr5 150763658 150763801 -48866349 + AluSc SINE Alu 1 127 -182 2191 89 0 20 chr5 150763801 150764104 -48866046 + AluY SINE Alu 1 297 -14 2171 79 0 40 chr5 150764104 150764264 -48865886 + AluSc SINE Alu 127 292 -17 863 150 8 0 chr5 150764275 150764402 -48865748 + AluJo/FLAM SINE Alu 1 128 -174 2252 98 3 3 chr5 150764404 150764710 -48865440 + AluSq SINE Alu 1 306 -7 1787 138 31 7 chr5 150764771 150765062 -48865088 - AluJb SINE Alu -14 298 1 2335 92 0 0 chr5 150768394 150768698 -48861452 + AluSc SINE Alu 1 304 -5 750 154 8 0 chr5 150768710 150768827 -48861323 + AluJb SINE Alu 1 118 -194 2045 87 0 0 chr5 150768852 150769117 -48861033 - AluSx SINE Alu -47 265 1 30 0 0 0 chr5 150769124 150769154 -48860996 + AT_rich Low_complexity Low_complexity 1 30 0 1971 114 20 17 chr5 150771688 150771858 -48858292 - AluSx SINE Alu -12 300 127 2511 61 0 0 chr5 150771858 150772169 -48857981 - AluY SINE Alu 0 311 1 1971 114 20 17 chr5 150772169 150772297 -48857853 - AluSx SINE Alu -185 127 1 1089 127 6 12 chr5 150772587 150772760 -48857390 + AluSg/x SINE Alu 139 310 0 2193 110 3 0 chr5 150773554 150773855 -48856295 - AluSx SINE Alu -10 302 1 993 176 0 32 chr5 150773860 150774048 -48856102 - AluJb SINE Alu -11 301 120 2353 76 3 25 chr5 150774479 150774796 -48855354 + AluSg SINE Alu 1 310 0 938 113 0 40 chr5 150775959 150776110 -48854040 - AluJb SINE Alu -167 145 1 563 284 72 72 chr5 150776117 150776451 -48853699 + L2 LINE L2 2932 3265 -7 2843 141 36 18 chr5 150777143 150777451 -48852699 + L1MB4 LINE L1 5674 5996 -184 2001 136 0 0 chr5 150777451 150777745 -48852405 + AluSx SINE Alu 1 294 -18 2843 141 36 18 chr5 150777745 150777932 -48852218 + L1MB4 LINE L1 5996 6178 -2 2087 115 3 0 chr5 150777958 150778253 -48851897 + AluSx SINE Alu 1 296 -16 359 248 182 33 chr5 150778989 150779110 -48851040 + L2 LINE L2 3134 3272 0 696 280 60 0 chr5 150779247 150779447 -48850703 + MIR SINE MIR 28 239 -23 343 286 224 49 chr5 150781639 150781988 -48848162 + L2 LINE L2 2904 3313 0 1343 243 126 82 chr5 150782462 150783002 -48847148 - MLT1K LTR MaLR -18 570 7 293 300 89 0 chr5 150783211 150783301 -48846849 - MER5B DNA MER1_type -80 98 1 419 263 4 156 chr5 150783492 150783616 -48846534 - MIR SINE MIR 0 262 121 2292 71 0 3 chr5 150783616 150783912 -48846238 - AluY SINE Alu -16 295 1 419 263 4 156 chr5 150783912 150783980 -48846170 - MIR SINE MIR -141 121 44 2084 127 0 6 chr5 150783980 150784294 -48845856 + AluSx SINE Alu 1 312 0 1616 138 18 68 chr5 150784302 150784628 -48845522 + AluJb SINE Alu 1 310 -2 419 263 4 156 chr5 150784628 150784695 -48845455 - MIR SINE MIR -152 110 34 181 93 0 47 chr5 150786841 150786884 -48843266 + (CCG)n Simple_repeat Simple_repeat 3 43 0 384 191 0 0 chr5 150787264 150787348 -48842802 + (CAG)n Simple_repeat Simple_repeat 3 86 0 248 364 0 0 chr5 150789086 150789237 -48840913 + C-rich Low_complexity Low_complexity 27 177 0 1106 180 46 5 chr5 150790802 150790996 -48839154 - AluJb SINE Alu -26 286 85 215 280 194 0 chr5 150791733 150791826 -48838324 - L2 LINE L2 -181 3091 2981 199 307 69 40 chr5 150792599 150792700 -48837450 - MER5A DNA MER1_type -57 132 29 1341 178 43 56 chr5 150792717 150792881 -48837269 - AluJo SINE Alu -1 301 141 2172 90 7 10 chr5 150792881 150793182 -48836968 - AluSx SINE Alu -12 300 1 1341 178 43 56 chr5 150793182 150793321 -48836829 - AluJo SINE Alu -161 141 2 30 45 0 0 chr5 150793467 150793511 -48836639 + AT_rich Low_complexity Low_complexity 1 44 0 1606 171 11 0 chr5 150794459 150794745 -48835405 + AluJo SINE Alu 1 289 -23 2211 114 0 0 chr5 150794774 150795081 -48835069 + AluSq SINE Alu 1 307 -6 2205 103 0 3 chr5 150795752 150796064 -48834086 + AluY SINE Alu 1 311 0 2271 91 7 0 chr5 150796185 150796494 -48833656 - AluSp SINE Alu 0 313 3 944 212 43 40 chr5 150796584 150796862 -48833288 - L1ME1 LINE L1 -234 5932 5654 2299 72 10 0 chr5 150797040 150797346 -48832804 - AluSg SINE Alu -1 309 1 1783 112 101 0 chr5 150797386 150797662 -48832488 - AluSx SINE Alu -8 304 1 2804 199 71 14 chr5 150798217 150798864 -48831286 + L1MB7 LINE L1 5480 6163 -21 2088 124 0 0 chr5 150798871 150799169 -48830981 - AluSx SINE Alu -14 298 1 2181 113 0 0 chr5 150799196 150799506 -48830644 + AluSx SINE Alu 2 311 -1 2517 52 3 0 chr5 150800242 150800552 -48829598 + AluY SINE Alu 1 311 0 207 259 56 0 chr5 150800628 150800682 -48829468 + MIR SINE MIR 97 153 -109 1886 147 7 0 chr5 150800716 150801022 -48829128 + AluJb SINE Alu 1 308 -4 670 85 0 0 chr5 150801238 150801332 -48828818 + AluSc SINE Alu 202 295 -14 606 248 73 13 chr5 150801372 150801606 -48828544 + L1ME4a LINE L1 5698 5945 -176 2099 72 54 0 chr5 150801652 150801929 -48828221 - AluY SINE Alu -19 292 1 2134 104 13 0 chr5 150801944 150802251 -48827899 - AluSp SINE Alu 0 313 3 2012 108 30 3 chr5 150802298 150802594 -48827556 - AluSx SINE Alu -6 306 3 1785 154 7 3 chr5 150802788 150803086 -48827064 + AluJo SINE Alu 3 301 -11 2066 118 0 16 chr5 150803089 150803404 -48826746 + AluSx SINE Alu 2 311 -1 206 280 170 16 chr5 150804161 150804343 -48825807 - L2 LINE L2 -337 2977 2768 2153 103 3 3 chr5 150804572 150804873 -48825277 - AluSg SINE Alu -9 301 1 803 218 26 70 chr5 150804938 150805466 -48824684 - L1MC5 LINE L1 -35 7926 7303 2796 153 13 38 chr5 150805574 150805620 -48824530 - L1MB7 LINE L1 -21 6163 6117 2471 61 0 0 chr5 150805620 150805931 -48824219 + AluY SINE Alu 1 311 0 2796 153 13 38 chr5 150805931 150806414 -48823736 - L1MB7 LINE L1 -67 6117 5647 1042 115 7 0 chr5 150806459 150806607 -48823543 + FAM SINE Alu 18 166 -19 309 216 0 99 chr5 150806693 150806745 -48823405 - L1MC5 LINE L1 -742 7219 7182 2009 141 3 0 chr5 150806745 150807057 -48823093 - AluSq SINE Alu 0 313 1 309 216 0 99 chr5 150807057 150807115 -48823035 - L1MC5 LINE L1 -779 7182 7120 2347 81 0 0 chr5 150807230 150807537 -48822613 + AluY SINE Alu 1 307 -4 2289 88 3 3 chr5 150807597 150807905 -48822245 + AluSp SINE Alu 1 308 -5 29 28 0 0 chr5 150808375 150808411 -48821739 + AT_rich Low_complexity Low_complexity 1 36 0 2103 125 3 0 chr5 150808687 150808998 -48821152 - AluSx SINE Alu 0 312 1 598 90 0 0 chr5 150809087 150809165 -48820985 - AluSg/x SINE Alu -20 290 213 226 91 0 0 chr5 150809186 150809219 -48820931 + Alu SINE Alu 1 33 -100 402 21 0 0 chr5 150809923 150809970 -48820180 + (CA)n Simple_repeat Simple_repeat 2 48 0 41 0 0 0 chr5 150811221 150811262 -48818888 + AT_rich Low_complexity Low_complexity 1 41 0 1361 181 7 40 chr5 150811546 150811845 -48818305 - AluJo SINE Alu -23 289 1 1249 204 72 68 chr5 150811931 150812417 -48817733 - L1MC5 LINE L1 -723 7238 6751 185 306 16 32 chr5 150812510 150812572 -48817578 + L2 LINE L2 3245 3305 -8 264 30 0 0 chr5 150812774 150812807 -48817343 + (CA)n Simple_repeat Simple_repeat 1 33 0 2224 88 3 13 chr5 150813201 150813507 -48816643 + AluSg SINE Alu 1 303 -7 831 153 77 101 chr5 150813620 150813829 -48816321 - AluJo SINE Alu -101 211 8 1032 163 25 20 chr5 150813894 150814097 -48816053 - AluJo SINE Alu -9 303 100 826 101 0 8 chr5 150814139 150814258 -48815892 + AluSq/x SINE Alu 18 135 -177 1661 175 10 3 chr5 150814258 150814566 -48815584 + AluJb SINE Alu 1 310 -2 242 304 39 20 chr5 150814629 150814731 -48815419 - MIR3 SINE MIR -11 197 94 950 113 0 0 chr5 150815139 150815272 -48814878 + AluSq/x SINE Alu 1 133 -180 22 0 0 0 chr5 150815272 150815294 -48814856 + AT_rich Low_complexity Low_complexity 1 22 0 2163 99 0 0 chr5 150815302 150815604 -48814546 + AluY SINE Alu 1 302 -9 347 244 13 13 chr5 150815951 150816029 -48814121 + MIR SINE MIR 70 147 -61 659 254 292 11 chr5 150816114 150816293 -48813857 + L2 LINE L2 2301 2429 -843 1859 128 7 3 chr5 150816293 150816589 -48813561 - AluJo SINE Alu -15 297 1 659 254 292 11 chr5 150816589 150816926 -48813224 + L2 LINE L2 2429 3024 -248 417 248 40 10 chr5 150817024 150817125 -48813025 + L2 LINE L2 3188 3291 -22 23 33 0 0 chr5 150818045 150818075 -48812075 + GC_rich Low_complexity Low_complexity 1 30 0 1104 225 33 52 chr5 150818652 150818959 -48811191 + AluSx SINE Alu 1 301 -1 204 125 0 0 chr5 150819219 150819251 -48810899 + (T)n Simple_repeat Simple_repeat 1 32 0 984 83 8 0 chr5 150819251 150819383 -48810767 - AluSq/x SINE Alu -180 133 1 2201 90 0 0 chr5 150819460 150819760 -48810390 + AluY SINE Alu 3 302 -9 347 244 13 13 chr5 150820107 150820185 -48809965 + MIR SINE MIR 70 147 -61 659 254 292 11 chr5 150820270 150820449 -48809701 + L2 LINE L2 2301 2429 -843 1881 125 7 3 chr5 150820449 150820745 -48809405 - AluJo SINE Alu -15 297 1 659 254 292 11 chr5 150820745 150821082 -48809068 + L2 LINE L2 2429 3024 -248 417 248 40 10 chr5 150821180 150821281 -48808869 + L2 LINE L2 3188 3291 -22 23 33 0 0 chr5 150822201 150822231 -48807919 + GC_rich Low_complexity Low_complexity 1 30 0 443 232 226 12 chr5 150825352 150825516 -48804634 - MIR SINE MIR -13 249 51 2115 108 0 0 chr5 150826874 150827161 -48802989 + AluSx SINE Alu 1 287 -25 2300 71 10 0 chr5 150827174 150827468 -48802682 + AluSp SINE Alu 1 297 -16 2229 61 25 0 chr5 150827484 150827787 -48802363 + AluY SINE Alu 1 310 0 186 352 127 21 chr5 150827875 150828017 -48802133 + MIR SINE MIR 103 259 -3 1086 135 65 14 chr5 150829463 150829678 -48800472 - AluSg/x SINE Alu -1 308 83 811 167 0 7 chr5 150830273 150830417 -48799733 + AluSq SINE Alu 27 169 -144 717 292 67 21 chr5 150830512 150830687 -48799463 + MIR SINE MIR 4 195 -67 2051 108 0 3 chr5 150830687 150830996 -48799154 + AluSq SINE Alu 1 308 0 717 292 67 21 chr5 150830996 150831059 -48799091 + MIR SINE MIR 195 254 -8 280 253 13 27 chr5 150831108 150831183 -48798967 - L3 LINE CR1 -136 1441 1368 198 0 0 0 chr5 150832049 150832071 -48798079 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 368 216 10 72 chr5 150835308 150835405 -48794745 - MIR SINE MIR -124 138 48 343 343 44 10 chr5 150835901 150836043 -48794107 - MIR3 SINE MIR -28 180 35 322 258 86 0 chr5 150836082 150836175 -48793975 + LTR50 LTR ERVL 1 101 -694 416 323 62 0 chr5 150836648 150836843 -48793307 + LTR33A LTR ERVL 315 521 -2 232 300 113 107 chr5 150836947 150837284 -48792866 - L2 LINE L2 0 3272 2934 751 158 0 68 chr5 150837308 150837454 -48792696 + MLT1C LTR MaLR 1 136 -331 2518 163 45 38 chr5 150837620 150838166 -48791984 - L1MB7 LINE L1 -205 5979 5431 1823 141 3 46 chr5 150838166 150838492 -48791658 - AluSx SINE Alu 0 312 1 2518 163 45 38 chr5 150838492 150838630 -48791520 - L1MB7 LINE L1 -753 5431 5295 647 261 48 88 chr5 150838632 150839007 -48791143 - MER115 DNA AcHobo -86 607 248 277 279 22 37 chr5 150838985 150839121 -48791029 - MER115 DNA AcHobo -548 145 12 * 828 121 8 8 chr5 150839200 150839332 -48790818 + AluJo/FLAM SINE Alu 2 133 -169 1614 171 24 0 chr5 150839335 150839627 -48790523 + AluSx SINE Alu 1 299 -13 2062 103 7 0 chr5 150839651 150839941 -48790209 + AluSp SINE Alu 2 293 -20 321 244 30 89 chr5 150840298 150840433 -48789717 + L1MEc LINE L1 2091 2217 -4179 372 289 152 34 chr5 150840881 150841085 -48789065 + MIR SINE MIR 35 262 0 629 294 5 28 chr5 150841296 150841514 -48788636 + ERVL LTR ERVL 5213 5425 -339 2044 221 50 114 chr5 150841827 150842613 -48787537 + LTR41 LTR ERVL 6 740 -33 2789 182 134 108 chr5 150842616 150842819 -48787331 + L1MC3 LINE L1 6691 6887 -898 2071 113 3 3 chr5 150842819 150843119 -48787031 + AluSx SINE Alu 1 300 -12 2789 182 134 108 chr5 150843119 150843296 -48786854 + L1MC3 LINE L1 6887 7058 -727 289 258 0 54 chr5 150843296 150843389 -48786761 + MLT1F1 LTR MaLR 35 122 -445 2789 182 134 108 chr5 150843389 150843981 -48786169 + L1MC3 LINE L1 7058 7784 -1 384 302 71 0 chr5 150845458 150845584 -48784566 - MIR SINE MIR -109 153 19 1277 176 0 9 chr5 150846512 150846734 -48783416 - AluJb SINE Alu -88 224 5 1937 156 0 0 chr5 150846740 150847041 -48783109 - AluSx SINE Alu -11 301 1 602 130 26 94 chr5 150847203 150847274 -48782876 - MLT1A1 LTR MaLR 0 386 312 2243 119 0 0 chr5 150847274 150847586 -48782564 - AluSx SINE Alu 0 312 1 602 130 26 94 chr5 150847586 150847681 -48782469 - MLT1A1 LTR MaLR -74 312 223 1527 132 3 68 chr5 150847934 150848244 -48781906 - AluSx SINE Alu -22 290 1 945 210 0 0 chr5 150848260 150848441 -48781709 + AluJb SINE Alu 132 312 0 338 349 64 83 chr5 150849333 150849612 -48780538 - L2 LINE L2 -21 3251 2968 378 0 0 0 chr5 150849612 150849654 -48780496 + (TTTTG)n Simple_repeat Simple_repeat 1 42 0 1635 156 18 14 chr5 150849658 150849934 -48780216 - AluJb SINE Alu -35 277 1 338 349 64 83 chr5 150849934 150850070 -48780080 - L2 LINE L2 -307 2965 2839 2140 82 17 7 chr5 150850144 150850437 -48779713 + AluY SINE Alu 1 296 -15 664 202 0 0 chr5 150850571 150850690 -48779460 - FLAM_A SINE Alu -16 126 8 1775 137 65 0 chr5 150851185 150851463 -48778687 - AluJb SINE Alu -16 296 1 2235 107 0 0 chr5 150851477 150851785 -48778365 - AluSc SINE Alu -1 308 1 23 0 0 0 chr5 150852986 150853009 -48777141 + AT_rich Low_complexity Low_complexity 1 23 0 2115 130 0 0 chr5 150854130 150854438 -48775712 + AluSx SINE Alu 1 308 -4 336 192 147 34 chr5 150854806 150854983 -48775167 + Charlie7 DNA MER1_type 2411 2607 -5 188 65 0 32 chr5 150855173 150855204 -48774946 + (TG)n Simple_repeat Simple_repeat 2 31 0 211 230 14 54 chr5 150855361 150855435 -48774715 + CT-rich Low_complexity Low_complexity 6 76 0 30 0 0 0 chr5 150855503 150855533 -48774617 + AT_rich Low_complexity Low_complexity 1 30 0 1856 114 7 27 chr5 150856373 150856670 -48773480 + AluSq SINE Alu 5 295 -18 1474 183 33 11 chr5 150856672 150856946 -48773204 - AluJo SINE Alu -32 280 1 1253 84 116 47 chr5 150857854 150857986 -48772164 - MER30 DNA MER1_type 0 230 76 1787 124 10 42 chr5 150857986 150858292 -48771858 - AluSx SINE Alu -16 296 1 1253 84 116 47 chr5 150858292 150858374 -48771776 - MER30 DNA MER1_type -154 76 1 421 284 22 8 chr5 150859487 150859621 -48770529 - MIR SINE MIR -13 249 114 180 158 0 0 chr5 150859624 150859662 -48770488 + (TAA)n Simple_repeat Simple_repeat 2 39 0 34 55 0 14 chr5 150859674 150859700 -48770450 + AT_rich Low_complexity Low_complexity 1 26 -46 799 145 0 0 chr5 150859700 150859817 -48770333 - FLAM_C SINE Alu -16 117 1 34 55 0 14 chr5 150859817 150859863 -48770287 + AT_rich Low_complexity Low_complexity 26 72 0 296 156 0 0 chr5 150859863 150859908 -48770242 - MER57A LTR ERV1 -64 339 295 270 280 153 19 chr5 150859942 150860099 -48770051 - MIR SINE MIR -33 229 52 199 313 42 0 chr5 150862381 150862429 -48767721 - L2 LINE L2 -17 3296 3247 1146 211 151 24 chr5 150863484 150863679 -48766471 - MLT1A2 LTR MaLR 0 374 205 2251 64 7 0 chr5 150863679 150863988 -48766162 + AluY SINE Alu 1 311 0 1146 211 151 24 chr5 150863988 150864123 -48766027 - MLT1A2 LTR MaLR -169 205 1 214 191 0 0 chr5 150864377 150864419 -48765731 + MIR SINE MIR 81 122 -140 518 298 118 17 chr5 150865466 150865704 -48764446 + MIR SINE MIR 1 262 0 812 161 0 0 chr5 150865826 150865956 -48764194 + FLAM_C SINE Alu 1 130 -13 2252 41 38 7 chr5 150866452 150866744 -48763406 - AluY SINE Alu -10 301 1 607 77 0 0 chr5 150866765 150866843 -48763307 + AluSg/x SINE Alu 215 292 -20 1880 122 56 0 chr5 150866932 150867220 -48762930 + AluSx SINE Alu 1 304 -8 450 311 43 19 chr5 150867270 150867431 -48762719 - MIR SINE MIR -80 182 18 1906 139 3 7 chr5 150868477 150868780 -48761370 - AluSx SINE Alu -9 303 2 434 334 35 98 chr5 150869035 150869352 -48760798 - L2 LINE L2 -5 3267 2971 231 289 93 45 chr5 150869602 150869848 -48760302 - L2 LINE L2 -785 2529 2272 1479 195 124 37 chr5 150871781 150872129 -48758021 - MSTB LTR MaLR 0 426 49 21 71 0 0 chr5 150872129 150872171 -48757979 + AT_rich Low_complexity Low_complexity 1 42 0 1027 145 0 21 chr5 150872455 150872641 -48757509 - AluSg/x SINE Alu -10 300 119 182 345 0 0 chr5 150873081 150873136 -48757014 - MIR SINE MIR -61 147 93 * 510 257 52 7 chr5 150873133 150873269 -48756881 - MIR SINE MIR -29 233 92 482 278 16 0 chr5 150873276 150873402 -48756748 - MIR SINE MIR -43 219 92 * 510 257 52 7 chr5 150873399 150873535 -48756615 - MIR SINE MIR -29 233 92 482 239 26 8 chr5 150873542 150873659 -48756491 - MIR SINE MIR -43 219 101 504 236 55 8 chr5 150873665 150873792 -48756358 - MIR SINE MIR -29 233 101 634 250 73 16 chr5 150873798 150873990 -48756160 - MIR SINE MIR -29 233 31 261 208 28 14 chr5 150874015 150874087 -48756063 + GA-rich Low_complexity Low_complexity 4 76 0 576 290 301 3 chr5 150875107 150875483 -48754667 - L2 LINE L2 0 3313 2826 22 56 0 19 chr5 150876277 150876301 -48753849 + AT_rich Low_complexity Low_complexity 1 24 -29 1618 149 38 17 chr5 150876301 150876590 -48753560 + AluJo SINE Alu 1 295 -17 22 56 0 19 chr5 150876590 150876619 -48753531 + AT_rich Low_complexity Low_complexity 24 53 0 27 0 0 0 chr5 150876793 150876820 -48753330 + AT_rich Low_complexity Low_complexity 1 27 0 1228 271 22 30 chr5 150877651 150878013 -48752137 - LTR16C LTR ERVL 0 491 133 756 329 84 36 chr5 150878129 150878761 -48751389 - L2 LINE L2 -457 2857 2196 250 279 29 0 chr5 150878981 150879049 -48751101 + MIR SINE MIR 76 145 -117 2436 73 0 0 chr5 150879392 150879694 -48750456 - AluSc SINE Alu -6 303 2 1742 122 19 39 chr5 150879882 150880023 -48750127 + AluSx SINE Alu 1 143 -169 2316 80 3 0 chr5 150880023 150880325 -48749825 + AluSx SINE Alu 1 303 -9 1742 122 19 39 chr5 150880325 150880495 -48749655 + AluSx SINE Alu 143 306 -6 294 208 19 0 chr5 150880593 150880646 -48749504 + AluJ/monomer SINE Alu 1 54 -249 637 55 44 0 chr5 150880746 150880837 -48749313 - AluY SINE Alu -214 97 3 371 259 190 40 chr5 150880858 150881032 -48749118 - L2 LINE L2 -285 3028 2829 1876 93 48 4 chr5 150881377 150881671 -48748479 + AluSq SINE Alu 3 308 0 2157 67 3 3 chr5 150881677 150881991 -48748159 + AluSp SINE Alu 1 314 0 893 87 0 0 chr5 150881994 150882158 -48747992 + AluSg/x SINE Alu 174 337 0 744 218 54 75 chr5 150882322 150882644 -48747506 + L1MC4 LINE L1 7739 7995 0 226 224 0 0 chr5 150884098 150884147 -48746003 + (TG)n Simple_repeat Simple_repeat 1 49 0 211 238 48 0 chr5 150884743 150884806 -48745344 + GA-rich Low_complexity Low_complexity 1 66 0 1903 152 0 0 chr5 150884832 150885122 -48745028 + AluJb SINE Alu 9 298 -14 314 218 0 0 chr5 150885124 150885179 -48744971 - MER5B DNA MER1_type -123 55 1 185 164 15 104 chr5 150885284 150885351 -48744799 + L2 LINE L2 2683 2743 -571 1316 173 38 52 chr5 150886644 150886933 -48743217 + AluJo SINE Alu 22 306 -6 341 238 250 0 chr5 150887118 150887282 -48742868 - L2 LINE L2 -5 3308 3104 823 100 0 15 chr5 150887332 150887462 -48742688 - AluY SINE Alu -4 307 180 1975 96 7 0 chr5 150887683 150887954 -48742196 + AluSg SINE Alu 1 273 -37 194 0 39 0 chr5 150887972 150887998 -48742152 + (GAA)n Simple_repeat Simple_repeat 2 28 0 925 115 0 0 chr5 150888265 150888395 -48741755 + FLAM_C SINE Alu 9 138 -5 431 289 121 54 chr5 150888899 150888952 -48741198 - MIR SINE MIR 0 262 214 1251 214 73 0 chr5 150888952 150889241 -48740909 - AluJo SINE Alu -2 310 1 431 289 121 54 chr5 150889241 150889426 -48740724 - MIR SINE MIR -48 214 8 400 56 113 14 chr5 150890546 150890617 -48739533 - AluJ/FLAM SINE Alu -230 82 5 539 184 167 29 chr5 150891246 150891420 -48738730 - L1MC4 LINE L1 -241 7801 7604 2285 86 0 16 chr5 150891423 150891738 -48738412 - AluY SINE Alu -1 310 1 5532 71 24 36 chr5 150891757 150892645 -48737505 - SVA Other Other 0 1386 510 421 239 124 14 chr5 150892656 150892865 -48737285 - SVA Other Other -592 794 563 384 155 17 0 chr5 150893036 150893094 -48737056 + AluJ/FLAM SINE Alu 4 62 -240 2063 126 7 3 chr5 150893095 150893404 -48736746 - AluSg SINE Alu 0 310 1 983 248 94 9 chr5 150893436 150893938 -48736212 + L2 LINE L2 2539 3077 -236 246 257 86 0 chr5 150893917 150893987 -48736163 + AluSg/x SINE Alu 107 182 -120 * 1834 159 0 0 chr5 150893944 150894239 -48735911 + AluJb SINE Alu 5 299 -13 708 192 31 8 chr5 150894251 150894381 -48735769 + AluJo SINE Alu 3 135 -177 884 194 0 42 chr5 150894410 150894601 -48735549 + AluJo SINE Alu 117 299 -13 712 254 33 14 chr5 150894610 150894823 -48735327 + L2 LINE L2 3078 3294 -19 2219 98 0 3 chr5 150894829 150895135 -48735015 + AluY SINE Alu 1 305 -6 224 256 49 24 chr5 150895302 150895384 -48734766 - MIR3 SINE MIR -12 196 113 * 427 267 59 22 chr5 150895381 150895516 -48734634 - MIR3 SINE MIR -15 193 54 487 240 308 32 chr5 150895661 150895940 -48734210 - L2 LINE L2 -95 3218 2863 1706 147 7 36 chr5 150896178 150896342 -48733808 - AluJo SINE Alu -15 297 145 2085 121 3 0 chr5 150896342 150896647 -48733503 - AluSx SINE Alu -6 306 1 1706 147 7 36 chr5 150896647 150896788 -48733362 - AluJo SINE Alu -167 145 1 488 255 121 0 chr5 150896808 150896957 -48733193 + Charlie8 DNA MER1_type 52 218 -2199 2162 55 44 0 chr5 150897092 150897367 -48732783 - AluY SINE Alu -19 292 6 404 173 92 108 chr5 150897381 150897424 -48732726 + L2 LINE L2 2890 2932 -340 1512 152 52 61 chr5 150897424 150897734 -48732416 - AluJb SINE Alu -5 307 1 404 173 92 108 chr5 150897734 150897875 -48732275 + L2 LINE L2 2932 3071 -201 216 0 0 0 chr5 150898074 150898098 -48732052 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 2110 110 6 25 chr5 150898098 150898415 -48731735 - AluSx SINE Alu -1 311 1 271 331 149 0 chr5 150898480 150898601 -48731549 + L2 LINE L2 3134 3272 0 323 286 103 24 chr5 150898676 150898802 -48731348 + L2 LINE L2 3137 3272 0 1494 160 13 36 chr5 150898821 150899128 -48731022 + AluJb SINE Alu 1 300 -12 1053 164 0 0 chr5 150899312 150899483 -48730667 + AluSg/x SINE Alu 139 309 -1 354 170 21 85 chr5 150899528 150899622 -48730528 - LTR16C LTR ERVL -191 300 213 423 280 90 40 chr5 150899671 150899871 -48730279 - LTR16C LTR ERVL -281 210 1 265 150 33 17 chr5 150899899 150899959 -48730191 + MLT1K LTR MaLR 524 584 -4 444 224 14 105 chr5 150900414 150900557 -48729593 - L2 LINE L2 -10 3262 3133 1023 210 163 74 chr5 150900648 150900814 -48729336 + MLT1F LTR MaLR 24 174 -368 2294 85 0 0 chr5 150900814 150901107 -48729043 + AluY SINE Alu 1 293 -18 1023 210 163 74 chr5 150901107 150901279 -48728871 + MLT1F LTR MaLR 174 370 -172 368 252 23 61 chr5 150901361 150901492 -48728658 - LTR16C LTR ERVL -281 210 85 427 154 115 0 chr5 150901496 150901574 -48728576 + MLT1F LTR MaLR 389 475 -92 1411 143 5 0 chr5 150901577 150901801 -48728349 - AluSq SINE Alu 0 313 89 386 319 65 49 chr5 150903103 150903366 -48726784 - L2 LINE L2 0 3313 3047 362 158 122 24 chr5 150903390 150903472 -48726678 + AluJb SINE Alu 213 302 0 234 0 0 0 chr5 150903498 150903524 -48726626 + (TG)n Simple_repeat Simple_repeat 1 26 0 1700 132 128 0 chr5 150903525 150903791 -48726359 - AluSx SINE Alu -2 300 1 265 289 35 64 chr5 150904829 150905002 -48725148 + L2 LINE L2 2553 2720 -594 216 0 0 0 chr5 150905071 150905095 -48725055 + (TTA)n Simple_repeat Simple_repeat 3 26 0 1361 69 0 27 chr5 150905098 150905286 -48724864 - AluY SINE Alu -24 287 105 180 0 0 0 chr5 150905532 150905552 -48724598 + (T)n Simple_repeat Simple_repeat 1 20 0 2206 57 3 7 chr5 150906119 150906425 -48723725 - AluY SINE Alu 0 305 1 262 300 160 13 chr5 150906728 150906965 -48723185 - L1MC4 LINE L1 -18 8024 7753 378 285 208 0 chr5 150906977 150907107 -48723043 + MER5A DNA MER1_type 8 164 -25 226 256 167 62 chr5 150907130 150907349 -48722801 - L1MC4a LINE L1 -173 7671 7476 1749 144 3 17 chr5 150907349 150907641 -48722509 - AluSx SINE Alu -15 297 10 226 256 167 62 chr5 150907641 150907655 -48722495 - L1MC4a LINE L1 -368 7476 7465 829 243 12 0 chr5 150907655 150907828 -48722322 - FAM SINE Alu 0 175 1 226 256 167 62 chr5 150907828 150907940 -48722210 - L1MC4a LINE L1 -379 7465 7326 833 106 15 15 chr5 150908146 150908278 -48721872 - FLAM_C SINE Alu 0 133 2 2200 92 0 0 chr5 150908929 150909221 -48720929 - AluSc SINE Alu -17 292 1 209 308 119 32 chr5 150909251 150909436 -48720714 + L2 LINE L2 2620 2820 -494 * 1109 249 80 18 chr5 150909435 150909773 -48720377 + L2 LINE L2 2935 3293 -20 247 359 145 0 chr5 150910045 150910176 -48719974 + L2 LINE L2 3123 3272 0 261 172 0 0 chr5 150910810 150910874 -48719276 + (ATG)n Simple_repeat Simple_repeat 1 64 0 1959 136 3 7 chr5 150910921 150911231 -48718919 + AluSx SINE Alu 1 309 -3 253 341 164 0 chr5 150911281 150911495 -48718655 + MIR SINE MIR 4 252 -10 1625 125 78 25 chr5 150911549 150911830 -48718320 - AluSx SINE Alu -16 296 1 709 304 36 14 chr5 150911830 150912050 -48718100 - MIR SINE MIR -34 228 4 401 312 99 59 chr5 150912055 150912257 -48717893 + LTR16B LTR ERVL 3 212 -252 894 114 24 24 chr5 150912264 150912431 -48717719 - L1MB3 LINE L1 -10 6173 6007 1450 106 31 35 chr5 150912431 150912686 -48717464 + AluSp SINE Alu 1 254 -59 297 128 0 0 chr5 150912875 150912922 -48717228 + (TATAG)n Simple_repeat Simple_repeat 3 49 0 678 104 10 0 chr5 150912928 150913024 -48717126 - AluS SINE Alu -215 98 2 1334 230 239 19 chr5 150913573 150914038 -48716112 + MLT1F1 LTR MaLR 1 567 0 557 179 41 128 chr5 150914210 150914280 -48715870 - MER58A DNA MER1_type -2198 222 147 2092 75 43 0 chr5 150914280 150914562 -48715588 + AluY SINE Alu 1 294 -17 557 179 41 128 chr5 150914562 150914686 -48715464 - MER58A DNA MER1_type -2273 147 45 214 330 77 0 chr5 150915330 150915421 -48714729 + L2 LINE L2 3161 3258 -14 961 128 12 12 chr5 150915559 150915723 -48714427 - L1MB7 LINE L1 -19 6165 6002 803 176 57 34 chr5 150916456 150916632 -48713518 - Tigger2 DNA MER2_type -2532 186 7 3467 183 74 18 chr5 150916636 150917422 -48712728 + Tigger6a DNA MER2_type 138 967 -116 725 170 30 22 chr5 150917426 150917561 -48712589 - AluJo SINE Alu -176 136 1 25 0 0 0 chr5 150917580 150917605 -48712545 + AT_rich Low_complexity Low_complexity 1 25 0 618 194 0 39 chr5 150917632 150917761 -48712389 + Tigger6a DNA MER2_type 953 1076 -7 1398 181 11 18 chr5 150917893 150918170 -48711980 - AluJb SINE Alu -18 294 20 1518 192 20 14 chr5 150918245 150918542 -48711608 - AluJb SINE Alu -13 299 1 614 296 98 54 chr5 150918664 150919052 -48711098 + L2 LINE L2 2909 3313 0 401 266 260 6 chr5 150919173 150919350 -48710800 - MIR SINE MIR -21 241 20 2959 177 79 107 chr5 150919390 150919870 -48710280 - L1MB7 LINE L1 -16 6168 5676 441 152 0 38 chr5 150919870 150919949 -48710201 - MADE1 DNA Mariner 0 80 5 2699 130 29 2 chr5 150919950 150920366 -48709784 - MSTA LTR MaLR 0 428 2 2959 177 79 107 chr5 150920366 150920699 -48709451 - L1MB7 LINE L1 -507 5677 5300 650 197 15 15 chr5 150920700 150920832 -48709318 - FLAM_A SINE Alu -3 139 8 30 27 0 0 chr5 150921461 150921498 -48708652 + AT_rich Low_complexity Low_complexity 1 37 0 333 325 125 35 chr5 150921517 150921717 -48708433 + MIR SINE MIR 2 219 -43 2077 117 13 0 chr5 150921726 150922025 -48708125 - AluSq SINE Alu -10 303 1 186 250 0 0 chr5 150922304 150922352 -48707798 + L2 LINE L2 3262 3309 -4 1863 123 27 14 chr5 150922715 150923008 -48707142 - AluSx SINE Alu -15 297 1 752 90 0 0 chr5 150923012 150923112 -48707038 + AluYb8 SINE Alu 18 117 -201 258 204 0 0 chr5 150923112 150923166 -48706984 + AluJ/monomer SINE Alu 246 299 -1 617 148 8 0 chr5 150923166 150923294 -48706856 + GA-rich Low_complexity Low_complexity 2 130 0 1579 144 13 37 chr5 150923296 150923618 -48706532 + AluSx SINE Alu 1 312 0 772 204 52 17 chr5 150924000 150924172 -48705978 - MER5B DNA MER1_type 0 178 1 494 295 90 66 chr5 150924272 150924338 -48705812 - MIR SINE MIR 0 262 199 2213 87 3 16 chr5 150924338 150924649 -48705501 - AluSc SINE Alu -1 308 2 494 295 90 66 chr5 150924649 150924803 -48705347 - MIR SINE MIR -63 199 33 1727 115 28 81 chr5 150924803 150925124 -48705026 - AluSg SINE Alu -6 304 1 494 295 90 66 chr5 150925124 150925146 -48705004 - MIR SINE MIR -229 33 13 400 228 188 0 chr5 150926423 150926524 -48703626 - L2 LINE L2 -1 3312 3193 844 142 0 0 chr5 150926524 150926651 -48703499 - AluJb SINE Alu -43 269 143 714 165 9 9 chr5 150926753 150926868 -48703282 - AluJ SINE Alu -31 281 167 824 119 8 0 chr5 150926869 150926987 -48703163 - AluJ SINE Alu -193 119 1 755 143 0 0 chr5 150926987 150927099 -48703051 - L1 LINE L1 -1226 4920 4809 350 259 71 18 chr5 150927157 150927269 -48702881 + L2 LINE L2 2639 2756 -558 744 167 0 0 chr5 150927301 150927415 -48702735 + AluJb SINE Alu 5 118 -194 1102 74 23 6 chr5 150927493 150927669 -48702481 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1211 160 102 35 chr5 150927682 150927938 -48702212 - AluSx SINE Alu -39 273 1 3117 146 47 64 chr5 150927938 150928894 -48701256 - MER21A LTR ERV1 -19 912 24 1791 171 0 16 chr5 150929067 150929383 -48700767 - AluJo SINE Alu -1 311 1 1757 161 3 3 chr5 150929569 150929907 -48700243 + AluJo SINE Alu 1 312 0 958 70 0 0 chr5 150930482 150930610 -48699540 + AluY SINE Alu 173 300 -11 371 238 67 0 chr5 150930610 150930715 -48699435 - MIR SINE MIR -63 199 88 1857 143 0 44 chr5 150931365 150931680 -48698470 + AluJo SINE Alu 1 301 -11 371 250 62 0 chr5 150931683 150931779 -48698371 - MIR3 SINE MIR -44 164 63 1415 135 0 0 chr5 150932525 150932733 -48697417 - AluSq SINE Alu -105 208 1 616 247 192 6 chr5 150932736 150933048 -48697102 - L1MC4 LINE L1 -800 7242 6873 768 159 0 0 chr5 150933103 150933216 -48696934 - FLAM_C SINE Alu -24 119 7 1500 126 5 0 chr5 150933262 150933484 -48696666 - AluSg/x SINE Alu -6 304 82 257 297 72 14 chr5 150933505 150933727 -48696423 - L1ME LINE L1 -295 5826 5592 2159 87 3 13 chr5 150933733 150934044 -48696106 - AluY SINE Alu -3 308 1 2193 93 6 6 chr5 150934054 150934367 -48695783 - AluSp SINE Alu 0 313 1 2048 82 7 23 chr5 150934818 150935124 -48695026 + AluY SINE Alu 1 301 -10 811 146 8 0 chr5 150937621 150937751 -48692399 - FLAM_C SINE Alu -12 131 1 2053 204 47 11 chr5 150938137 150938583 -48691567 - MLT1C LTR MaLR 0 467 6 2680 7 0 0 chr5 150938612 150938909 -48691241 - AluYa5 SINE Alu -14 297 1 1243 134 0 0 chr5 150939103 150939289 -48690861 - AluSg/x SINE Alu -5 305 120 330 87 0 0 chr5 150939289 150939335 -48690815 + (TATAG)n Simple_repeat Simple_repeat 3 48 0 1007 178 125 8 chr5 150939436 150939700 -48690450 - AluSq SINE Alu -8 295 1 507 138 0 122 chr5 150939700 150939758 -48690392 + MLT1F1 LTR MaLR 460 497 -70 2172 89 10 0 chr5 150939758 150940049 -48690101 + AluSc SINE Alu 1 294 -15 507 138 0 122 chr5 150940049 150940113 -48690037 + MLT1F1 LTR MaLR 497 567 0 813 126 0 0 chr5 150941157 150941276 -48688874 - FLAM_C SINE Alu -3 140 22 1618 183 0 10 chr5 150941313 150941603 -48688547 - AluJb SINE Alu -7 305 19 2104 105 23 3 chr5 150941659 150941963 -48688187 + AluSx SINE Alu 1 310 -2 2199 224 40 18 chr5 150941963 150942462 -48687688 + MLT1G LTR MaLR 18 482 -60 914 133 0 0 chr5 150942464 150942599 -48687551 - AluJo SINE Alu -177 135 1 375 231 189 42 chr5 150942643 150942786 -48687364 - MIR SINE MIR -87 175 12 2059 118 0 13 chr5 150943813 150944128 -48686022 + AluSp SINE Alu 1 311 -2 565 230 115 70 chr5 150944389 150944589 -48685561 - MIR SINE MIR -6 256 48 1412 107 5 0 chr5 150944952 150945148 -48685002 + AluSq SINE Alu 1 197 -116 730 275 52 41 chr5 150945412 150945533 -48684617 + L2 LINE L2 2382 2500 -814 1834 160 0 26 chr5 150945533 150945846 -48684304 + AluJb SINE Alu 1 305 -7 730 275 52 41 chr5 150945846 150945993 -48684157 + L2 LINE L2 2500 2653 -661 993 168 6 6 chr5 150946043 150946222 -48683928 + AluSg SINE Alu 1 179 -131 706 135 95 8 chr5 150946495 150946621 -48683529 - AluY SINE Alu -173 138 2 969 91 8 0 chr5 150946697 150946829 -48683321 + AluSq/x SINE Alu 1 133 -180 195 129 0 0 chr5 150946829 150946860 -48683290 + (A)n Simple_repeat Simple_repeat 1 31 0 1961 113 16 35 chr5 150947110 150947428 -48682722 - AluSx SINE Alu 0 312 1 382 194 10 10 chr5 150947431 150947529 -48682621 + CT-rich Low_complexity Low_complexity 2 99 0 1424 164 48 45 chr5 150947529 150947839 -48682311 - AluJb SINE Alu -1 311 1 180 0 0 0 chr5 150947844 150947864 -48682286 + (A)n Simple_repeat Simple_repeat 1 20 0 1447 147 4 43 chr5 150947866 150948145 -48682005 + AluSx SINE Alu 1 268 -44 855 103 17 0 chr5 150948147 150948263 -48681887 - AluJo/FLAM SINE Alu -184 118 1 352 253 11 11 chr5 150948665 150948752 -48681398 + L2 LINE L2 3227 3313 0 2126 76 21 0 chr5 150948777 150949067 -48681083 + AluSc SINE Alu 1 296 -13 2311 44 20 3 chr5 150949195 150949488 -48680662 - AluY SINE Alu -13 298 1 921 140 78 31 chr5 150951161 150951354 -48678796 + MER20 DNA MER1_type 17 218 -1 1565 141 72 3 chr5 150951994 150952284 -48677866 - AluSx SINE Alu -2 310 1 884 135 0 0 chr5 150952334 150952467 -48677683 + AluSq/x SINE Alu 1 133 -179 2196 95 3 3 chr5 150952470 150952765 -48677385 + AluSc SINE Alu 1 295 -14 1454 164 88 0 chr5 150953428 150953702 -48676448 + AluJb SINE Alu 1 298 -14 1982 110 24 0 chr5 150953702 150953827 -48676323 + AluSq SINE Alu 1 122 -191 207 0 0 0 chr5 150953827 150953850 -48676300 + (CA)n Simple_repeat Simple_repeat 2 24 0 1982 110 24 0 chr5 150953850 150954015 -48676135 + AluSq SINE Alu 122 299 -14 1902 117 3 14 chr5 150954179 150954470 -48675680 + AluSx SINE Alu 1 288 -24 1987 106 21 3 chr5 150954884 150955168 -48674982 + AluSq SINE Alu 7 295 -18 744 153 7 83 chr5 150955326 150955470 -48674680 - FLAM_C SINE Alu 0 133 1 1251 160 112 8 chr5 150955498 150955766 -48674384 + AluJb SINE Alu 1 296 -16 463 257 19 0 chr5 150955811 150955916 -48674234 + FLAM_C SINE Alu 2 108 -35 30 27 0 0 chr5 150955932 150955969 -48674181 + AT_rich Low_complexity Low_complexity 1 37 0 1754 133 111 13 chr5 150956019 150956334 -48673816 - L1MB7 LINE L1 -281 5903 5558 1813 121 3 46 chr5 150957125 150957448 -48672702 - AluSp SINE Alu -4 309 1 1977 127 3 7 chr5 150957461 150957760 -48672390 - AluSx SINE Alu -14 298 1 2011 125 0 7 chr5 150959447 150959751 -48670399 - AluSp SINE Alu -11 302 1 855 184 46 0 chr5 150959775 150959927 -48670223 + AluJb SINE Alu 129 287 -25 266 233 86 17 chr5 150960503 150960619 -48669531 - L1MC/D LINE L1 -2050 5758 5635 483 333 116 0 chr5 150960713 150960938 -48669212 + MIR SINE MIR 12 262 0 1186 139 50 63 chr5 150960984 150961222 -48668928 + AluJo SINE Alu 35 269 -43 2041 134 0 0 chr5 150961249 150961556 -48668594 + AluSx SINE Alu 1 307 -5 922 113 299 0 chr5 150961771 150961948 -48668202 - MER30 DNA MER1_type 0 230 1 736 208 95 0 chr5 150962313 150962481 -48667669 - MER3 DNA MER1_type -25 184 1 2303 63 7 10 chr5 150963081 150963382 -48666768 - AluSq SINE Alu -12 301 2 2402 65 0 0 chr5 150963414 150963707 -48666443 + AluSc SINE Alu 1 293 -16 483 132 0 0 chr5 150964244 150964312 -48665838 + AluS SINE Alu 2 69 -243 210 71 0 0 chr5 150964321 150964349 -48665801 + (TATG)n Simple_repeat Simple_repeat 1 28 0 2186 85 41 0 chr5 150964806 150965101 -48665049 + AluY SINE Alu 1 307 -4 1790 149 10 17 chr5 150966251 150966552 -48663598 + AluJb SINE Alu 1 299 -13 333 194 0 56 chr5 150968317 150968389 -48661761 + AluJ/FLAM SINE Alu 1 68 -234 543 71 0 0 chr5 150968389 150968459 -48661691 + AluSc SINE Alu 134 203 -106 24 0 0 0 chr5 150970279 150970303 -48659847 + AT_rich Low_complexity Low_complexity 1 24 0 315 242 236 18 chr5 150970641 150970806 -48659344 - MLT1L LTR MaLR -8 607 407 198 188 83 0 chr5 150971317 150971365 -48658785 - MER5B DNA MER1_type -126 52 1 396 226 230 59 chr5 150971546 150971886 -48658264 - MLT2B1 LTR ERVL -26 371 1 1504 138 3 53 chr5 150972045 150972228 -48657922 - AluSx SINE Alu -2 310 144 2045 86 31 7 chr5 150972228 150972519 -48657631 - AluSq SINE Alu -12 301 4 1504 138 3 53 chr5 150972519 150972618 -48657532 - AluSx SINE Alu -168 144 42 1071 132 11 11 chr5 150972618 150972782 -48657368 - AluJo/FRAM SINE Alu -10 302 136 780 231 79 30 chr5 150972783 150972986 -48657164 - AluJb SINE Alu -98 214 2 2180 96 7 0 chr5 150973280 150973581 -48656569 - AluSg SINE Alu -7 303 1 2090 121 0 3 chr5 150974314 150974619 -48655531 - AluSx SINE Alu -8 304 1 242 304 39 20 chr5 150975027 150975129 -48655021 + MIR3 SINE MIR 94 197 -11 1603 158 14 7 chr5 150975192 150975483 -48654667 - AluJb SINE Alu -2 310 18 1026 163 25 20 chr5 150975525 150975727 -48654423 + AluJo SINE Alu 100 302 -10 883 152 66 99 chr5 150975793 150976004 -48654146 + AluJo SINE Alu 8 211 -101 2210 92 3 13 chr5 150976117 150976423 -48653727 - AluSg SINE Alu -7 303 1 375 41 0 0 chr5 150976821 150976870 -48653280 + (TG)n Simple_repeat Simple_repeat 1 49 0 185 306 16 32 chr5 150977072 150977134 -48653016 - L2 LINE L2 -8 3305 3245 1249 204 72 68 chr5 150977227 150977713 -48652437 + L1MC5 LINE L1 6751 7238 -723 1361 181 7 40 chr5 150977799 150978098 -48652052 + AluJo SINE Alu 1 289 -23 31 0 0 0 chr5 150978382 150978413 -48651737 + AT_rich Low_complexity Low_complexity 1 31 0 350 123 0 0 chr5 150978413 150978470 -48651680 - Alu SINE Alu -1 300 244 427 265 133 54 chr5 150978628 150978794 -48651356 - MIR SINE MIR -50 212 34 353 322 180 50 chr5 150979760 150980021 -48650129 + L2 LINE L2 2978 3272 0 248 367 29 43 chr5 150980298 150980505 -48649645 - L2 LINE L2 -559 2755 2552 647 246 158 5 chr5 150980989 150981204 -48648946 + MIR SINE MIR 15 262 0 374 297 99 18 chr5 150981770 150981940 -48648210 - MIR SINE MIR -51 211 30 1398 192 43 0 chr5 150982747 150983023 -48647127 + AluJo SINE Alu 14 301 -11 297 109 0 0 chr5 150983278 150983324 -48646826 + (CA)n Simple_repeat Simple_repeat 2 47 0 1871 154 0 0 chr5 150983785 150984078 -48646072 + AluJo SINE Alu 1 293 -19 214 241 19 0 chr5 150984436 150984490 -48645660 - L2 LINE L2 -7 3265 3211 1893 128 30 0 chr5 150984678 150984982 -48645168 - AluSq SINE Alu 0 313 1 934 326 17 22 chr5 150985097 150985456 -48644694 + MLT1K LTR MaLR 69 425 -163 2144 123 0 7 chr5 150985494 150985672 -48644478 - AluSg SINE Alu -1 309 132 2182 79 17 0 chr5 150985672 150985962 -48644188 - AluY SINE Alu -15 296 2 2144 123 0 7 chr5 150985962 150986093 -48644057 - AluSg SINE Alu -178 132 2 871 124 0 15 chr5 150986120 150986257 -48643893 - AluJo SINE Alu -177 135 1 1844 143 10 7 chr5 150986385 150986678 -48643472 - AluSx SINE Alu -17 295 2 1942 126 23 0 chr5 150987185 150987486 -48642664 + AluSx SINE Alu 1 308 -4 1121 237 127 31 chr5 150988161 150988578 -48641572 - LTR16A1 LTR ERVL 0 457 1 676 141 0 0 chr5 150988586 150988685 -48641465 - MLT1A2 LTR MaLR -4 386 288 893 149 48 12 chr5 150988730 150988898 -48641252 - MLT1A2 LTR MaLR -200 174 1 252 0 0 0 chr5 150991700 150991728 -48638422 + (CAG)n Simple_repeat Simple_repeat 3 30 0 * 297 0 0 0 chr5 150991727 150991760 -48638390 + (TG)n Simple_repeat Simple_repeat 1 33 0 2005 139 0 3 chr5 150992193 150992502 -48637648 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr5 150992598 150992620 -48637530 + AT_rich Low_complexity Low_complexity 1 22 0 2010 84 0 0 chr5 150992962 150993224 -48636926 - AluSx SINE Alu -12 300 39 457 335 101 38 chr5 150993461 150993623 -48636527 - L2 LINE L2 -7 3306 3156 2099 115 3 0 chr5 150993623 150993919 -48636231 + AluSx SINE Alu 1 297 -15 457 335 101 38 chr5 150993919 150994183 -48635967 - L2 LINE L2 -157 3156 2853 831 162 117 13 chr5 150994228 150994382 -48635768 - FAM SINE Alu -2 173 4 2150 100 17 0 chr5 150994391 150994692 -48635458 - AluSq SINE Alu -7 306 1 2088 107 0 0 chr5 150994731 150995022 -48635128 + AluSx SINE Alu 1 291 -21 282 261 11 57 chr5 150995039 150995127 -48635023 - L3 LINE CR1 -1 1576 1493 205 276 85 81 chr5 150995767 150995926 -48634224 - L2 LINE L2 -2 3270 3114 891 117 0 29 chr5 150995975 150996112 -48634038 + FLAM_C SINE Alu 1 133 0 1935 115 0 56 chr5 150996119 150996424 -48633726 - AluSx SINE Alu -24 288 1 403 184 10 10 chr5 150996427 150996525 -48633625 + CT-rich Low_complexity Low_complexity 2 99 0 1569 164 48 45 chr5 150996525 150996835 -48633315 - AluJb SINE Alu -1 311 1 180 0 0 0 chr5 150996840 150996860 -48633290 + (A)n Simple_repeat Simple_repeat 1 20 0 1673 125 4 43 chr5 150996862 150997141 -48633009 + AluSx SINE Alu 1 268 -44 874 103 17 0 chr5 150997143 150997259 -48632891 - AluJo/FLAM SINE Alu -184 118 1 353 253 11 11 chr5 150997661 150997748 -48632402 + L2 LINE L2 3227 3313 0 2261 74 20 10 chr5 150997773 150998071 -48632079 + AluSc SINE Alu 1 301 -8 2443 44 20 3 chr5 150998191 150998484 -48631666 - AluY SINE Alu -13 298 1 871 161 57 10 chr5 151000157 151000350 -48629800 + MER20 DNA MER1_type 17 218 -1 1726 140 72 3 chr5 151000991 151001283 -48628867 - AluSx SINE Alu 0 312 1 948 135 0 0 chr5 151001333 151001466 -48628684 + AluSq/x SINE Alu 1 133 -179 2345 95 3 3 chr5 151001469 151001764 -48628386 + AluSc SINE Alu 1 295 -14 1645 161 86 0 chr5 151002427 151002706 -48627444 + AluJb SINE Alu 1 303 -9 2124 110 24 0 chr5 151002706 151002832 -48627318 + AluSq SINE Alu 1 123 -190 279 0 0 0 chr5 151002832 151002863 -48627287 + (CA)n Simple_repeat Simple_repeat 2 32 0 2124 110 24 0 chr5 151002863 151003028 -48627122 + AluSq SINE Alu 122 299 -14 2040 117 3 14 chr5 151003192 151003483 -48626667 + AluSx SINE Alu 1 288 -24 2106 109 21 3 chr5 151003897 151004181 -48625969 + AluSq SINE Alu 7 295 -18 790 146 7 83 chr5 151004339 151004483 -48625667 - FLAM_C SINE Alu 0 133 1 1396 178 112 7 chr5 151004511 151004780 -48625370 + AluJb SINE Alu 1 297 -15 500 261 14 36 chr5 151004825 151004963 -48625187 + AluSq/x SINE Alu 2 136 -176 1658 133 111 13 chr5 151005033 151005348 -48624802 - L1MB7 LINE L1 -281 5903 5558 1964 121 3 46 chr5 151006139 151006462 -48623688 - AluSp SINE Alu -4 309 1 2112 130 3 7 chr5 151006475 151006774 -48623376 - AluSx SINE Alu -14 298 1 2219 122 0 6 chr5 151008462 151008773 -48621377 - AluSp SINE Alu -4 309 1 871 183 46 0 chr5 151008797 151008950 -48621200 + AluJb SINE Alu 129 288 -24 242 233 86 17 chr5 151009525 151009641 -48620509 - L1MC/D LINE L1 -2050 5758 5635 489 339 106 0 chr5 151009735 151009962 -48620188 + MIR SINE MIR 12 262 0 1293 139 50 63 chr5 151010008 151010246 -48619904 + AluJo SINE Alu 35 269 -43 2187 136 0 0 chr5 151010273 151010583 -48619567 + AluSx SINE Alu 1 310 -2 925 113 299 0 chr5 151010795 151010972 -48619178 - MER30 DNA MER1_type 0 230 1 693 208 95 0 chr5 151011339 151011507 -48618643 - MER3 DNA MER1_type -25 184 1 2455 80 0 3 chr5 151012107 151012409 -48617741 - AluSq SINE Alu -12 301 1 2129 124 0 0 chr5 151012425 151012708 -48617442 - AluSg SINE Alu -27 283 1 448 346 87 13 chr5 151012745 151012976 -48617174 + L2 LINE L2 2826 3073 -240 347 312 147 30 chr5 151012989 151013220 -48616930 + L1MC4a LINE L1 5937 6194 -1614 195 42 0 0 chr5 151013244 151013268 -48616882 + (TTCC)n Simple_repeat Simple_repeat 3 26 0 1187 187 109 50 chr5 151013283 151013566 -48616584 - AluJo SINE Alu -7 305 6 242 250 50 0 chr5 151013586 151013646 -48616504 - MER58A DNA MER1_type -40 67 5 446 232 37 111 chr5 151013663 151013853 -48616297 + L2 LINE L2 3134 3309 -4 321 26 0 0 chr5 151014141 151014179 -48615971 + (CA)n Simple_repeat Simple_repeat 2 39 0 182 244 0 0 chr5 151014779 151014820 -48615330 + MIR SINE MIR 46 86 -176 324 83 0 0 chr5 151014822 151014870 -48615280 + (TC)n Simple_repeat Simple_repeat 1 48 0 671 122 0 98 chr5 151014878 151015001 -48615149 - FLAM_A SINE Alu -26 116 6 288 91 0 0 chr5 151015834 151015878 -48614272 + (TG)n Simple_repeat Simple_repeat 2 45 0 189 107 0 0 chr5 151016218 151016246 -48613904 + (TTCC)n Simple_repeat Simple_repeat 1 28 0 269 336 7 0 chr5 151016391 151016528 -48613622 + (TG)n Simple_repeat Simple_repeat 2 139 0 2567 195 33 16 chr5 151016908 151017457 -48612693 - L1MB1 LINE L1 0 6168 5611 797 188 33 8 chr5 151017457 151017685 -48612465 + L1MB1 LINE L1 5343 5606 -562 2291 116 37 5 chr5 151017708 151018086 -48612064 - L1PA13 LINE L1 -2 6161 5772 22 0 0 0 chr5 151018568 151018590 -48611560 + AT_rich Low_complexity Low_complexity 1 22 0 493 300 157 18 chr5 151018648 151018871 -48611279 - MIR SINE MIR -1 261 8 2125 129 6 6 chr5 151018893 151019204 -48610946 - AluSx SINE Alu -1 311 1 186 373 39 0 chr5 151019931 151020033 -48610117 + L3b LINE CR1 1167 1272 -311 1786 147 3 35 chr5 151020394 151020680 -48609470 + AluJo SINE Alu 23 299 -13 567 239 114 27 chr5 151020858 151021264 -48608886 - LTR48 LTR ERV1 -105 539 1 703 121 0 0 chr5 151021364 151021463 -48608687 - AluJb SINE Alu -7 305 207 2412 152 9 45 chr5 151021955 151022082 -48608068 - MER65A LTR ERV1 0 445 315 2147 123 3 3 chr5 151022082 151022382 -48607768 - AluSx SINE Alu -12 300 1 2224 140 0 0 chr5 151022383 151022690 -48607460 - AluJb SINE Alu -5 307 1 2412 152 9 45 chr5 151022690 151022971 -48607179 - MER65A LTR ERV1 -130 315 51 2422 103 0 0 chr5 151022971 151023282 -48606868 - AluY SINE Alu 0 311 1 2412 152 9 45 chr5 151023282 151023332 -48606818 - MER65A LTR ERV1 -394 51 1 207 338 62 12 chr5 151023451 151023531 -48606619 - L2 LINE L2 -51 3221 3138 2218 102 0 3 chr5 151023550 151023834 -48606316 + AluSq SINE Alu 1 283 -30 267 292 88 0 chr5 151023973 151024086 -48606064 - L2 LINE L2 -1 3271 3149 1989 121 0 33 chr5 151024434 151024739 -48605411 + AluSx SINE Alu 18 312 0 459 123 0 0 chr5 151025612 151025693 -48604457 + (GA)n Simple_repeat Simple_repeat 2 82 0 1779 131 6 88 chr5 151026268 151026596 -48603554 + AluSx SINE Alu 1 301 -11 2249 120 0 0 chr5 151027404 151027705 -48602445 - AluSx SINE Alu -6 306 6 1252 201 4 4 chr5 151027738 151027972 -48602178 + AluJb SINE Alu 75 308 -4 1104 141 39 113 chr5 151027972 151028096 -48602054 - Charlie1a DNA MER1_type -1308 1453 1321 582 176 0 0 chr5 151028096 151028198 -48601952 + U13 snRNA snRNA 1 102 -2 1104 141 39 113 chr5 151028198 151028428 -48601722 - Charlie1a DNA MER1_type -1440 1321 1125 2183 125 10 16 chr5 151028450 151028763 -48601387 - AluSx SINE Alu -1 311 1 563 153 92 0 chr5 151028769 151028867 -48601283 - AluSq/x SINE Alu -204 108 2 4441 151 37 118 chr5 151028904 151029531 -48600619 - Charlie1a DNA MER1_type -1675 1086 410 1913 159 3 16 chr5 151029531 151029846 -48600304 + AluJb SINE Alu 2 312 0 4441 151 37 118 chr5 151029846 151029869 -48600281 - Charlie1a DNA MER1_type -2351 410 387 204 40 0 0 chr5 151029869 151029894 -48600256 + (CA)n Simple_repeat Simple_repeat 2 26 0 4441 151 37 118 chr5 151029894 151030056 -48600094 - Charlie1a DNA MER1_type -2374 387 213 2225 99 3 0 chr5 151030056 151030340 -48599810 - AluSp SINE Alu -27 286 2 4441 151 37 118 chr5 151030340 151030617 -48599533 - Charlie1a DNA MER1_type -2548 213 96 1803 159 3 19 chr5 151030617 151030931 -48599219 + AluJb SINE Alu 1 309 -3 4441 151 37 118 chr5 151030931 151031020 -48599130 - Charlie1a DNA MER1_type -2665 96 1 597 283 103 94 chr5 151031037 151031458 -48598692 + L2 LINE L2 2122 2553 -761 2042 127 69 0 chr5 151031458 151031749 -48598401 - AluSx SINE Alu -1 311 1 597 283 103 94 chr5 151031749 151031996 -48598154 + L2 LINE L2 2553 2796 -518 236 255 21 45 chr5 151032047 151032195 -48597955 + L2 LINE L2 3119 3311 -2 1075 149 6 0 chr5 151032491 151032659 -48597491 + AluSg/x SINE Alu 135 303 -7 600 194 20 119 chr5 151032812 151033013 -48597137 - MIR SINE MIR -6 256 76 2032 106 75 0 chr5 151033439 151033721 -48596429 - AluSc SINE Alu -6 303 1 294 211 75 98 chr5 151034264 151034397 -48595753 + MIR3 SINE MIR 12 141 -67 923 143 0 0 chr5 151034404 151034537 -48595613 + FLAM_A SINE Alu 1 133 0 902 141 0 0 chr5 151034605 151034754 -48595396 + L1MB3 LINE L1 6004 6152 -31 2221 105 7 0 chr5 151034779 151035074 -48595076 - AluSx SINE Alu -15 297 1 1483 246 249 14 chr5 151036251 151036941 -48593209 + L2 LINE L2 1784 2635 -679 1609 155 83 4 chr5 151036957 151037221 -48592929 + AluSx SINE Alu 8 292 -20 663 136 0 0 chr5 151037227 151037315 -48592835 + AluY SINE Alu 2 89 -222 670 128 0 26 chr5 151037317 151037434 -48592716 - L1MA9 LINE L1 -32 6280 6167 2235 107 3 7 chr5 151037434 151037744 -48592406 - AluSg SINE Alu -1 309 1 526 191 9 9 chr5 151037744 151037849 -48592301 - MLT1J LTR MaLR -336 175 71 1338 262 91 3 chr5 151037890 151038433 -48591717 + L2 LINE L2 2615 3207 -106 2435 94 13 0 chr5 151038883 151039192 -48590958 + AluSp SINE Alu 1 313 0 1884 126 81 0 chr5 151039309 151039727 -48590423 + AluSx SINE Alu 1 441 0 853 155 42 62 chr5 151040218 151040279 -48589871 - MER5A DNA MER1_type 0 189 128 1960 163 7 7 chr5 151040279 151040585 -48589565 + AluJb SINE Alu 1 306 -6 853 155 42 62 chr5 151040585 151040716 -48589434 - MER5A DNA MER1_type -61 128 1 199 375 167 0 chr5 151040766 151040934 -48589216 + L3b LINE CR1 1293 1488 -95 200 167 28 0 chr5 151041528 151041564 -48588586 - MIR SINE MIR -8 254 218 748 152 76 14 chr5 151041863 151042008 -48588142 + MLT1A2 LTR MaLR 1 154 -220 509 286 27 7 chr5 151042019 151042166 -48587984 + FRAM SINE Alu 1 150 -26 299 24 0 24 chr5 151042616 151042657 -48587493 + (TG)n Simple_repeat Simple_repeat 2 41 0 1692 172 3 7 chr5 151042658 151042943 -48587207 - AluJb SINE Alu -28 284 1 263 355 40 32 chr5 151042946 151043070 -48587080 + L2 LINE L2 3122 3246 -26 459 147 0 118 chr5 151043204 151043235 -48586915 + MER45A DNA AcHobo 40 73 -1508 2432 97 0 0 chr5 151043235 151043566 -48586584 + AluSc SINE Alu 1 309 0 459 147 0 118 chr5 151043566 151043636 -48586514 + MER45A DNA AcHobo 73 129 -49 1963 168 76 37 chr5 151043751 151043816 -48586334 - MSTA LTR MaLR 0 428 367 1933 113 106 0 chr5 151043816 151044066 -48586084 + AluSq SINE Alu 1 286 -27 180 0 0 0 chr5 151044066 151044086 -48586064 + (CA)n Simple_repeat Simple_repeat 1 20 0 1933 113 106 0 chr5 151044086 151044118 -48586032 + AluSq SINE Alu 286 313 0 1963 168 76 37 chr5 151044118 151044284 -48585866 - MSTA LTR MaLR -61 367 209 1929 130 0 46 chr5 151044284 151044442 -48585708 - AluJb SINE Alu -19 293 154 2058 120 20 3 chr5 151044442 151044734 -48585416 - AluSq SINE Alu -16 297 1 1929 130 0 46 chr5 151044734 151044882 -48585268 - AluJb SINE Alu -158 154 1 1963 168 76 37 chr5 151044882 151045059 -48585091 - MSTA LTR MaLR -219 209 3 230 259 12 47 chr5 151045071 151045156 -48584994 - L2 LINE L2 -276 2996 2915 1857 145 24 7 chr5 151045198 151045488 -48584662 - AluJb SINE Alu -13 299 5 282 330 161 0 chr5 151045596 151045714 -48584436 - L2 LINE L2 -3 3269 3133 214 57 75 57 chr5 151045918 151045971 -48584179 + T-rich Low_complexity Low_complexity 2 55 0 944 119 30 2 chr5 151046179 151046416 -48583734 + AluJo SINE Alu 11 296 -16 234 256 64 13 chr5 151046430 151046508 -48583642 + MIR3 SINE MIR 116 197 -11 215 290 206 0 chr5 151046511 151046618 -48583532 + MIR3 SINE MIR 39 167 -41 309 278 52 21 chr5 151048207 151048304 -48581846 - L2 LINE L2 0 3272 3173 718 322 39 16 chr5 151048367 151048622 -48581528 + MIR SINE MIR 2 262 0 296 359 130 0 chr5 151048650 151048781 -48581369 - L2 LINE L2 -3 3269 3122 353 276 151 7 chr5 151048814 151048966 -48581184 - MIR SINE MIR -3 259 86 193 229 0 114 chr5 151048989 151049059 -48581091 - L2 LINE L2 -184 3088 3027 1598 163 51 0 chr5 151049064 151049340 -48580810 - AluJo SINE Alu -22 290 1 1628 173 3 3 chr5 151050745 151051029 -48579121 + AluJb SINE Alu 24 307 -5 368 247 13 0 chr5 151051095 151051172 -48578978 + L2 LINE L2 3236 3313 0 596 292 88 5 chr5 151052086 151052329 -48577821 - L2 LINE L2 -270 3043 2784 477 0 0 0 chr5 151052337 151052390 -48577760 + (TATTG)n Simple_repeat Simple_repeat 2 54 0 1855 96 7 7 chr5 151052390 151052660 -48577490 - AluSx SINE Alu -26 286 17 981 163 19 0 chr5 151052770 151052930 -48577220 + MER69A DNA AcHobo 15 177 0 297 208 32 120 chr5 151053257 151053382 -48576768 - MIR SINE MIR -71 191 78 759 214 115 22 chr5 151053400 151053582 -48576568 - MIR SINE MIR -57 205 7 204 182 0 45 chr5 151053926 151053970 -48576180 - MIR SINE MIR -59 149 108 2124 128 0 0 chr5 151053994 151054306 -48575844 + AluSx SINE Alu 1 312 0 225 345 23 0 chr5 151054354 151054441 -48575709 - L2 LINE L2 -338 2976 2888 636 297 30 65 chr5 151054538 151054905 -48575245 + L2 LINE L2 2216 2569 -745 1123 275 63 62 chr5 151055045 151055119 -48575031 - L2 LINE L2 0 3313 3241 1923 138 7 0 chr5 151055119 151055415 -48574735 + AluSx SINE Alu 1 298 -14 1123 275 63 62 chr5 151055415 151055510 -48574640 - L2 LINE L2 -72 3241 3148 1630 145 129 30 chr5 151055510 151055813 -48574337 - MER1B DNA MER1_type 0 337 5 1123 275 63 62 chr5 151055813 151055894 -48574256 - L2 LINE L2 -165 3148 3069 1719 180 0 10 chr5 151055894 151056200 -48573950 - AluJo SINE Alu -9 303 1 1123 275 63 62 chr5 151056200 151056495 -48573655 - L2 LINE L2 -244 3069 2739 1282 134 30 35 chr5 151056499 151056730 -48573420 - L1PA15 LINE L1 0 6165 5936 302 326 96 15 chr5 151056864 151056999 -48573151 + L2 LINE L2 2686 2831 -483 2083 205 125 111 chr5 151057118 151057648 -48572502 - L2 LINE L2 -39 3274 2753 2336 61 3 0 chr5 151057648 151057942 -48572208 - AluY SINE Alu -16 295 1 2083 205 125 111 chr5 151057942 151058119 -48572031 - L2 LINE L2 -560 2753 2580 2217 86 3 10 chr5 151058119 151058421 -48571729 + AluSx SINE Alu 1 300 -12 2083 205 125 111 chr5 151058421 151058661 -48571489 - L2 LINE L2 -733 2580 2325 1309 189 27 43 chr5 151058661 151058962 -48571188 + AluJo SINE Alu 1 296 -16 2083 205 125 111 chr5 151058962 151059174 -48570976 - L2 LINE L2 -988 2325 2118 195 296 37 49 chr5 151059115 151059196 -48570954 - L3 LINE CR1 -918 659 580 * 1668 95 0 22 chr5 151059202 151059296 -48570854 - AluSx SINE Alu -85 227 132 1953 120 34 0 chr5 151059296 151059588 -48570562 - AluSq SINE Alu -11 302 1 1668 95 0 22 chr5 151059588 151059725 -48570425 - AluSx SINE Alu -180 132 1 1887 177 93 21 chr5 151059739 151059832 -48570318 - Charlie1b DNA MER1_type -2253 508 423 1535 171 7 20 chr5 151059832 151060136 -48570014 + AluJo SINE Alu 1 300 -12 1887 177 93 21 chr5 151060136 151060516 -48569634 - Charlie1b DNA MER1_type -2338 423 1 1026 250 54 11 chr5 151060516 151060792 -48569358 - L2 LINE L2 -1190 2124 1837 1685 160 14 0 chr5 151062075 151062362 -48567788 - AluJo SINE Alu -21 291 1 236 292 45 11 chr5 151062555 151062644 -48567506 - L2 LINE L2 -189 3083 2992 243 313 42 10 chr5 151062989 151063085 -48567065 + L2 LINE L2 2271 2369 -945 1800 128 6 35 chr5 151063147 151063321 -48566829 - AluSx SINE Alu -3 309 132 234 0 0 0 chr5 151063321 151063347 -48566803 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1640 124 34 8 chr5 151063353 151063619 -48566531 - AluSg SINE Alu -37 273 1 1800 128 6 35 chr5 151063619 151063749 -48566401 - AluSx SINE Alu -185 127 7 212 303 198 53 chr5 151063842 151064165 -48565985 - L2 LINE L2 -327 2945 2588 1514 180 24 14 chr5 151064205 151064500 -48565650 + AluJb SINE Alu 1 298 -14 180 111 0 0 chr5 151064500 151064527 -48565623 + (GGAA)n Simple_repeat Simple_repeat 1 27 0 609 160 173 26 chr5 151064528 151064684 -48565466 + L1MB3 LINE L1 5953 6131 -52 570 139 0 0 chr5 151064685 151064771 -48565379 + FRAM SINE Alu 75 160 -16 226 262 145 69 chr5 151064939 151065084 -48565066 + L2 LINE L2 3115 3270 -2 1257 126 5 0 chr5 151065282 151065473 -48564677 - AluSp SINE Alu 0 313 122 1255 103 0 15 chr5 151065480 151065658 -48564492 - AluY SINE Alu -2 309 133 2214 98 3 0 chr5 151065658 151065963 -48564187 - AluSc SINE Alu -3 306 1 1255 103 0 15 chr5 151065963 151065979 -48564171 - AluY SINE Alu -178 133 118 4751 161 41 47 chr5 151065981 151066097 -48564053 - L1M4c LINE L1 -5393 991 876 2058 109 17 0 chr5 151066097 151066390 -48563760 - AluSp SINE Alu -14 299 2 4751 161 41 47 chr5 151066390 151067267 -48562883 - L1M4c LINE L1 -5508 876 4 2422 74 3 0 chr5 151067269 151067581 -48562569 - AluSp SINE Alu 0 313 1 525 93 0 153 chr5 151067581 151067659 -48562491 - L1MB2 LINE L1 -341 5830 5774 1932 122 14 14 chr5 151067659 151067953 -48562197 - AluSx SINE Alu -18 294 1 525 93 0 153 chr5 151067953 151067992 -48562158 - L1MB2 LINE L1 -397 5774 5731 242 258 97 43 chr5 151068490 151068528 -48561622 + L1ME1 LINE L1 6049 6084 -82 1798 135 24 7 chr5 151068528 151068817 -48561333 - AluSx SINE Alu -18 294 1 242 258 97 43 chr5 151068817 151068871 -48561279 + L1ME1 LINE L1 6084 6146 -20 1786 155 0 3 chr5 151069047 151069344 -48560806 - AluJb SINE Alu -16 296 1 1051 194 10 10 chr5 151070725 151070931 -48559219 - AluJo SINE Alu -106 206 1 2011 109 20 3 chr5 151071200 151071502 -48558648 + AluSx SINE Alu 5 311 -1 663 96 10 29 chr5 151071503 151071607 -48558543 + AluSg/x SINE Alu 130 231 -79 2131 119 0 0 chr5 151071932 151072234 -48557916 - AluSg SINE Alu -8 302 1 355 244 58 76 chr5 151072317 151072489 -48557661 - L3 LINE CR1 -115 1462 1294 2314 84 3 3 chr5 151073815 151074124 -48556026 + AluSc SINE Alu 1 309 0 189 0 0 0 chr5 151074270 151074291 -48555859 + (T)n Simple_repeat Simple_repeat 1 21 0 754 79 0 0 chr5 151074336 151074437 -48555713 - L1PA5 LINE L1 -1 6153 6053 202 237 0 0 chr5 151074669 151074707 -48555443 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 2287 86 3 0 chr5 151076496 151076799 -48553351 - AluSx SINE Alu -8 304 1 1762 144 14 21 chr5 151077363 151077654 -48552496 + AluSx SINE Alu 14 302 -10 2162 93 20 0 chr5 151077659 151077959 -48552191 + AluSg SINE Alu 1 306 -4 326 277 154 32 chr5 151078332 151078585 -48551565 - L1ME4a LINE L1 -66 6055 5772 2160 60 46 0 chr5 151078752 151079035 -48551115 + AluY SINE Alu 1 296 -15 219 69 0 0 chr5 151080326 151080355 -48549795 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr5 151080362 151080384 -48549766 + AT_rich Low_complexity Low_complexity 1 22 0 412 297 88 0 chr5 151080687 151080835 -48549315 - MIR SINE MIR -54 208 48 42 0 0 0 chr5 151081447 151081489 -48548661 + AT_rich Low_complexity Low_complexity 1 42 0 425 195 271 0 chr5 151081516 151081634 -48548516 - AluSq/x SINE Alu -161 151 2 2047 113 7 0 chr5 151081645 151081937 -48548213 - AluSp SINE Alu -19 294 1 495 48 0 0 chr5 151082337 151082399 -48547751 + (TATG)n Simple_repeat Simple_repeat 2 63 0 1515 108 0 0 chr5 151082402 151082614 -48547536 - AluSg/x SINE Alu -30 280 69 2117 117 69 27 chr5 151082614 151082989 -48547161 + Tigger2 DNA MER2_type 748 1138 -1580 2128 90 3 27 chr5 151083000 151083300 -48546850 + AluSp SINE Alu 1 293 -20 2791 155 81 30 chr5 151083335 151083865 -48546285 - Tigger2 DNA MER2_type -1985 733 177 1207 276 138 5 chr5 151084717 151085094 -48545056 - L2 LINE L2 0 3313 2887 1145 230 109 46 chr5 151085094 151085533 -48544617 - MLT1L LTR MaLR 0 615 149 536 179 0 0 chr5 151085618 151085702 -48544448 + FRAM/FAM SINE Alu 1 83 -93 356 218 23 0 chr5 151085749 151085836 -48544314 + L1M4 LINE L1 4108 4196 -1950 236 281 37 62 chr5 151086159 151086291 -48543859 + MIR SINE MIR 62 192 -67 1829 97 35 4 chr5 151087249 151087508 -48542642 + AluSx SINE Alu 3 269 -43 351 0 0 0 chr5 151087511 151087550 -48542600 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 243 0 0 0 chr5 151087661 151087688 -48542462 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 1616 183 0 0 chr5 151087688 151087962 -48542188 - AluJb SINE Alu -32 280 7 1756 167 0 7 chr5 151088074 151088373 -48541777 - AluJb SINE Alu -15 297 1 231 314 73 16 chr5 151088373 151088497 -48541653 + L2 LINE L2 3137 3267 -5 684 160 56 0 chr5 151089599 151089724 -48540426 + L1M4 LINE L1 4477 4608 -1538 1917 117 3 7 chr5 151089730 151090043 -48540107 + AluSx SINE Alu 1 312 0 393 216 67 61 chr5 151090052 151090200 -48539950 + L1MCc LINE L1 68 568 -5854 1731 148 107 0 chr5 151090221 151090538 -48539612 + L1MB7 LINE L1 5819 6169 -15 966 192 0 11 chr5 151091321 151091498 -48538652 - FAM SINE Alu 0 175 1 621 215 77 150 chr5 151091505 151091658 -48538492 + MIR SINE MIR 9 135 -127 2117 119 0 0 chr5 151091658 151091951 -48538199 - AluSg SINE Alu -17 293 1 621 215 77 150 chr5 151091951 151092071 -48538079 + MIR SINE MIR 135 262 0 770 165 16 0 chr5 151092685 151092812 -48537338 + AluJb SINE Alu 2 130 -182 327 232 0 96 chr5 151093421 151093513 -48536637 - L2 LINE L2 -11 3302 3223 1710 169 7 7 chr5 151093513 151093820 -48536330 - AluJo SINE Alu -5 307 1 327 232 0 96 chr5 151093820 151093852 -48536298 - L2 LINE L2 -90 3223 3190 2192 97 0 10 chr5 151094015 151094324 -48535826 + AluSx SINE Alu 1 306 -6 2318 103 0 0 chr5 151094388 151094699 -48535451 + AluSx SINE Alu 1 311 -1 1772 111 8 8 chr5 151094963 151095225 -48534925 + AluSx SINE Alu 37 298 -14 702 283 25 5 chr5 151095526 151095724 -48534426 - L2 LINE L2 0 3313 3112 1235 153 0 10 chr5 151095728 151095930 -48534220 + AluJo SINE Alu 1 200 -112 276 120 0 0 chr5 151095935 151095985 -48534165 + (GA)n Simple_repeat Simple_repeat 1 50 0 1043 272 8 45 chr5 151096036 151096187 -48533963 - L2 LINE L2 -269 3044 2889 2010 133 0 3 chr5 151096187 151096489 -48533661 + AluSx SINE Alu 1 301 -11 1043 272 8 45 chr5 151096489 151096707 -48533443 - L2 LINE L2 -424 2889 2686 558 192 6 122 chr5 151096709 151096796 -48533354 + MER3 DNA MER1_type 1 64 -98 717 198 0 0 chr5 151096796 151096922 -48533228 - FLAM_A SINE Alu -3 130 5 558 192 6 122 chr5 151096922 151096990 -48533160 + MER3 DNA MER1_type 64 138 -71 30 27 0 0 chr5 151096979 151097016 -48533134 + AT_rich Low_complexity Low_complexity 1 37 0 * 989 107 23 0 chr5 151097191 151097322 -48532828 + AluSq/x SINE Alu 1 134 -178 2288 99 0 0 chr5 151097345 151097647 -48532503 + AluY SINE Alu 1 302 -9 291 256 13 13 chr5 151097993 151098071 -48532079 + MIR SINE MIR 70 147 -61 254 210 16 16 chr5 151098156 151098218 -48531932 + L2 LINE L2 2301 2362 -952 2264 117 0 0 chr5 151098789 151099097 -48531053 - AluSx SINE Alu -4 308 1 2113 124 0 0 chr5 151099113 151099396 -48530754 - AluSg SINE Alu -27 283 1 364 284 22 8 chr5 151100500 151100634 -48529516 - MIR SINE MIR -13 249 114 180 158 0 0 chr5 151100637 151100675 -48529475 + (TAA)n Simple_repeat Simple_repeat 2 39 0 26 0 0 0 chr5 151100687 151100713 -48529437 + AT_rich Low_complexity Low_complexity 1 26 0 773 171 0 0 chr5 151100713 151100830 -48529320 - FLAM_C SINE Alu -16 117 1 1364 160 112 7 chr5 151100858 151101127 -48529023 + AluJb SINE Alu 1 297 -15 477 261 14 36 chr5 151101172 151101310 -48528840 + AluSq/x SINE Alu 2 136 -177 486 114 61 0 chr5 151101357 151101458 -48528692 - L1MB8 LINE L1 -236 5930 5823 242 200 127 0 chr5 151101584 151101639 -48528511 + FAM SINE Alu 112 173 -2 307 335 101 38 chr5 151101684 151101948 -48528202 + L2 LINE L2 2853 3156 -157 2225 115 3 0 chr5 151101948 151102244 -48527906 - AluSx SINE Alu -15 297 1 307 335 101 38 chr5 151102244 151102406 -48527744 + L2 LINE L2 3156 3306 -7 1791 107 4 16 chr5 151102643 151102896 -48527254 + AluSx SINE Alu 39 288 -24 2079 111 21 3 chr5 151103305 151103594 -48526556 + AluSx SINE Alu 1 294 -18 650 200 0 8 chr5 151104569 151104699 -48525451 + FLAM_A SINE Alu 2 130 -3 286 327 28 0 chr5 151105222 151105329 -48524821 + L2 LINE L2 3192 3301 -12 209 245 57 94 chr5 151105663 151105769 -48524381 + MER5A DNA MER1_type 85 186 -3 285 292 198 55 chr5 151105774 151106031 -48524119 - L2 LINE L2 -5 3308 3015 1863 162 33 3 chr5 151106356 151106658 -48523492 + AluJb SINE Alu 1 311 -1 2192 105 3 7 chr5 151106710 151107005 -48523145 + AluSx SINE Alu 1 294 -18 2343 91 0 13 chr5 151107007 151107314 -48522836 + AluSg SINE Alu 1 303 -7 38 22 0 0 chr5 151107314 151107359 -48522791 + AT_rich Low_complexity Low_complexity 1 45 0 1687 107 4 8 chr5 151107876 151108139 -48522011 - AluSx SINE Alu 0 312 56 2449 81 0 0 chr5 151108911 151109220 -48520930 + AluSg1 SINE Alu 1 309 0 802 160 73 60 chr5 151109285 151109497 -48520653 + LTR8 LTR ERV1 1 185 -356 940 205 95 108 chr5 151109651 151109766 -48520384 + LTR8A LTR ERV1 287 402 -325 1691 173 39 7 chr5 151109766 151110049 -48520101 + AluSx SINE Alu 1 292 -20 940 205 95 108 chr5 151110049 151110376 -48519774 + LTR8A LTR ERV1 402 723 -4 1866 158 0 33 chr5 151110472 151110776 -48519374 + AluJb SINE Alu 1 294 -18 21 0 0 0 chr5 151110776 151110797 -48519353 + AT_rich Low_complexity Low_complexity 1 21 0 302 279 204 0 chr5 151110938 151111085 -48519065 + MIR SINE MIR 86 262 0 1998 143 0 3 chr5 151112697 151112990 -48517160 + AluSx SINE Alu 1 292 -20 1546 136 30 0 chr5 151113259 151113495 -48516655 + AluSx SINE Alu 37 279 -33 283 23 45 0 chr5 151113497 151113541 -48516609 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 191 114 29 0 chr5 151113995 151114030 -48516120 + (CA)n Simple_repeat Simple_repeat 2 37 0 1678 156 58 0 chr5 151114098 151114373 -48515777 - AluJb SINE Alu -13 299 9 611 211 120 70 chr5 151114425 151114667 -48515483 - L2 LINE L2 -908 2406 2153 2320 98 3 13 chr5 151115124 151115439 -48514711 + AluSx SINE Alu 1 312 0 371 196 84 19 chr5 151115489 151115596 -48514554 + L1ME2 LINE L1 6050 6163 -1 1828 189 0 0 chr5 151115601 151115898 -48514252 + AluJo SINE Alu 1 297 -15 465 261 36 0 chr5 151116205 151116316 -48513834 + MIR SINE MIR 1 115 -147 756 123 0 33 chr5 151116417 151116539 -48513611 + FLAM_C SINE Alu 9 126 -17 1622 191 6 38 chr5 151117385 151117699 -48512451 + AluJo SINE Alu 1 304 -8 1143 148 6 0 chr5 151118567 151118771 -48511379 + AluSq SINE Alu 115 319 0 274 139 0 0 chr5 151118775 151118818 -48511332 - L1M3 LINE L1 -364 5807 5765 1082 244 12 4 chr5 151118818 151119076 -48511074 + LTR16B LTR ERVL 192 451 -13 2224 91 17 3 chr5 151119096 151119392 -48510758 - AluSx SINE Alu -12 300 1 2299 94 0 13 chr5 151119467 151119765 -48510385 - AluSx SINE Alu -18 294 1 21 36 0 0 chr5 151119776 151119804 -48510346 + AT_rich Low_complexity Low_complexity 1 28 0 280 230 40 0 chr5 151119944 151120018 -48510132 - L1ME4a LINE L1 -30 6091 6015 262 316 127 66 chr5 151120221 151120433 -48509717 - L2 LINE L2 -79 3193 2969 1845 172 11 0 chr5 151121583 151121868 -48508282 + AluJo SINE Alu 1 288 -24 2140 113 3 3 chr5 151124003 151124295 -48505855 - AluSg SINE Alu -18 292 1 1093 105 0 0 chr5 151124296 151124439 -48505711 - AluSq/x SINE Alu -169 143 1 219 187 13 27 chr5 151124568 151124643 -48505507 + CT-rich Low_complexity Low_complexity 2 75 0 532 145 120 43 chr5 151124949 151125066 -48505084 - LTR16C LTR ERVL 0 491 366 307 175 19 0 chr5 151125128 151125195 -48504955 + AluJ/FLAM SINE Alu 4 62 -240 4858 137 31 47 chr5 151125306 151125366 -48504784 + L1MA5 LINE L1 4917 4976 -1324 689 215 0 0 chr5 151125366 151125496 -48504654 + FLAM_C SINE Alu 1 130 -3 4858 137 31 47 chr5 151125496 151125673 -48504477 + L1MA5 LINE L1 4976 5154 -1146 1876 138 54 43 chr5 151125673 151126042 -48504108 + THE1C LTR MaLR 1 373 -2 4858 137 31 47 chr5 151126042 151126394 -48503756 + L1MA5 LINE L1 5154 5510 -790 1876 158 7 0 chr5 151126394 151126701 -48503449 - AluSx SINE Alu 0 309 1 4858 137 31 47 chr5 151126701 151127346 -48502804 + L1MA5 LINE L1 5510 6122 -178 236 174 43 0 chr5 151127346 151127392 -48502758 + AluJb SINE Alu 78 125 -177 26 23 0 23 chr5 151127398 151127424 -48502726 + AT_rich Low_complexity Low_complexity 1 27 -16 1958 133 3 3 chr5 151127424 151127710 -48502440 + AluSq SINE Alu 1 286 -27 26 23 0 23 chr5 151127710 151127727 -48502423 + AT_rich Low_complexity Low_complexity 27 43 0 941 146 6 76 chr5 151127727 151127898 -48502252 + AluJb SINE Alu 133 291 -21 957 159 0 0 chr5 151127898 151128074 -48502076 + L1MA5 LINE L1 6125 6300 0 2422 88 0 22 chr5 151128076 151128396 -48501754 + AluSq SINE Alu 1 313 0 2224 117 0 3 chr5 151128430 151128728 -48501422 + AluSx SINE Alu 2 298 -14 750 211 46 0 chr5 151128728 151128880 -48501270 + AluJb SINE Alu 134 292 -20 1324 210 49 11 chr5 151128908 151129194 -48500956 - MLT1C LTR MaLR 0 467 171 2048 98 3 28 chr5 151129214 151129499 -48500651 - AluY SINE Alu -33 278 1 1009 165 0 0 chr5 151129500 151129664 -48500486 - FRAM SINE Alu -8 168 5 495 95 0 95 chr5 151129664 151129748 -48500402 - MLT1C LTR MaLR -220 176 95 702 105 18 18 chr5 151129787 151129901 -48500249 - MLT1C LTR MaLR -351 116 3 992 267 194 2 chr5 151129902 151130012 -48500138 - L2 LINE L2 -993 2321 2233 1719 161 0 76 chr5 151130012 151130182 -48499968 + AluJo SINE Alu 1 138 -174 2108 133 0 0 chr5 151130182 151130475 -48499675 - AluSx SINE Alu -14 298 6 1719 161 0 76 chr5 151130475 151130620 -48499530 + AluJo SINE Alu 138 292 -20 992 267 194 2 chr5 151130620 151130969 -48499181 - L2 LINE L2 -1081 2233 1774 895 181 78 0 chr5 151130969 151131135 -48499015 + AluJb SINE Alu 134 312 0 227 328 62 23 chr5 151131140 151131268 -48498882 - L2 LINE L2 -1534 1780 1648 797 326 13 3 chr5 151131277 151131584 -48498566 - L2 LINE L2 -1772 1542 1233 615 263 37 63 chr5 151131661 151131851 -48498299 - MLT1K LTR MaLR -347 241 57 358 191 16 1 chr5 151132075 151132167 -48497983 + Alu SINE Alu 2 52 -250 532 253 253 21 chr5 151132260 151132545 -48497605 - MLT1I LTR MaLR 0 409 59 1918 164 0 13 chr5 151132672 151132976 -48497174 + AluJb SINE Alu 1 300 -12 45758 35 1 1 chr5 151132988 151139141 -48491009 + L1PA4 LINE L1 1 6155 0 250 330 70 20 chr5 151139216 151139416 -48490734 - L2 LINE L2 -213 3059 2850 1467 145 0 13 chr5 151139419 151139646 -48490504 - AluJb SINE Alu -5 307 84 1251 153 9 23 chr5 151140172 151140387 -48489763 + AluJo SINE Alu 85 296 -16 534 316 66 58 chr5 151141041 151141237 -48488913 - L2 LINE L2 0 3313 3111 2344 98 3 0 chr5 151141237 151141534 -48488616 + AluSp SINE Alu 1 298 -15 534 316 66 58 chr5 151141534 151141714 -48488436 - L2 LINE L2 -202 3111 2934 2187 123 0 13 chr5 151141816 151142132 -48488018 + AluJb SINE Alu 1 312 0 425 302 31 6 chr5 151142133 151142292 -48487858 - LTR33A LTR ERVL -28 495 333 1188 130 0 0 chr5 151142433 151142595 -48487555 + AluSx SINE Alu 1 162 -150 289 187 144 58 chr5 151142710 151142849 -48487301 + MIR SINE MIR 112 262 0 2158 221 65 106 chr5 151143163 151143606 -48486544 - MLT1G LTR MaLR -2 588 180 2294 97 7 0 chr5 151143606 151143904 -48486246 - AluSx SINE Alu -12 300 1 2158 221 65 106 chr5 151143904 151144076 -48486074 - MLT1G LTR MaLR -410 180 3 955 306 52 19 chr5 151144450 151144989 -48485161 + L1M4 LINE L1 2995 3551 -2595 2013 113 63 0 chr5 151144992 151145276 -48484874 - AluJb SINE Alu -10 302 1 429 217 62 81 chr5 151145280 151145400 -48484750 - MIR SINE MIR -74 188 70 1851 140 31 7 chr5 151145400 151145692 -48484458 - AluJb SINE Alu -13 299 1 429 217 62 81 chr5 151145692 151145732 -48484418 - MIR SINE MIR -192 70 31 1703 116 47 82 chr5 151146139 151146457 -48483693 + AluJo SINE Alu 1 307 -5 1943 100 62 71 chr5 151146537 151146683 -48483467 + MER1B DNA MER1_type 1 147 -2563 2275 99 0 10 chr5 151146683 151146985 -48483165 - AluSg SINE Alu 0 310 12 1943 100 62 71 chr5 151146985 151147178 -48482972 + MER1B DNA MER1_type 147 337 0 359 295 76 54 chr5 151147470 151147694 -48482456 + MLT1H LTR MaLR 105 333 -216 784 222 148 20 chr5 151148036 151148239 -48481911 + MIR SINE MIR 34 262 0 360 235 24 12 chr5 151148728 151148813 -48481337 + L2 LINE L2 3227 3312 -1 365 206 20 29 chr5 151149498 151149600 -48480550 - LTR67 LTR ERVL 0 557 457 798 157 8 15 chr5 151149710 151150013 -48480137 - FLAM_C SINE Alu 0 302 1 745 186 0 0 chr5 151150050 151150168 -48479982 + FLAM_C SINE Alu 1 118 -15 1867 133 27 0 chr5 151150194 151150488 -48479662 - AluSx SINE Alu -10 302 1 273 279 50 29 chr5 151150519 151150704 -48479446 - MLT1K LTR MaLR -342 246 3 533 139 0 0 chr5 151150928 151151007 -48479143 + AluSg/x SINE Alu 218 296 -16 1238 248 40 70 chr5 151151606 151151906 -48478244 + LTR33 LTR ERVL 27 308 -213 2126 118 0 0 chr5 151151906 151152202 -48477948 + AluSx SINE Alu 3 298 -14 1238 248 40 70 chr5 151152202 151152402 -48477748 + LTR33 LTR ERVL 308 512 -9 313 247 235 0 chr5 151153338 151153423 -48476727 - L2 LINE L2 0 3272 3168 1313 130 0 0 chr5 151153524 151153716 -48476434 + AluSg/x SINE Alu 105 296 -14 2804 199 71 14 chr5 151153723 151154370 -48475780 - L1MB7 LINE L1 -21 6163 5480 1783 112 101 0 chr5 151154925 151155201 -48474949 + AluSx SINE Alu 1 304 -8 2299 72 10 0 chr5 151155241 151155547 -48474603 + AluSg SINE Alu 1 309 -1 944 212 43 40 chr5 151155725 151156003 -48474147 + L1ME1 LINE L1 5654 5932 -234 2271 91 7 0 chr5 151156093 151156402 -48473748 + AluSp SINE Alu 3 313 0 2205 103 0 3 chr5 151156523 151156835 -48473315 - AluY SINE Alu 0 311 1 2211 114 0 0 chr5 151157506 151157813 -48472337 - AluSq SINE Alu -6 307 1 1583 173 11 0 chr5 151157842 151158126 -48472024 - AluJo SINE Alu -23 289 3 2012 108 30 3 chr5 151158320 151158616 -48471534 + AluSx SINE Alu 3 306 -6 2157 101 13 0 chr5 151158663 151158970 -48471180 + AluSp SINE Alu 3 313 0 2099 72 54 0 chr5 151158985 151159262 -48470888 + AluY SINE Alu 1 292 -19 606 248 73 13 chr5 151159308 151159542 -48470608 - L1ME4a LINE L1 -176 5945 5698 670 85 0 0 chr5 151159582 151159676 -48470474 - AluSc SINE Alu -14 295 202 1886 147 7 0 chr5 151159892 151160198 -48469952 - AluJb SINE Alu -4 308 1 207 259 56 0 chr5 151160232 151160286 -48469864 - MIR SINE MIR -109 153 97 2517 52 3 0 chr5 151160362 151160672 -48469478 - AluY SINE Alu 0 311 1 2310 87 0 0 chr5 151161408 151161719 -48468431 - AluSx SINE Alu -1 311 1 607 77 0 0 chr5 151161740 151161818 -48468332 + AluSg/x SINE Alu 215 292 -20 1880 122 56 0 chr5 151161907 151162195 -48467955 + AluSx SINE Alu 1 304 -8 450 311 43 19 chr5 151162244 151162405 -48467745 - MIR SINE MIR -80 182 18 2206 100 0 0 chr5 151163451 151163751 -48466399 - AluSc SINE Alu -9 300 1 2143 96 14 0 chr5 151163923 151164215 -48465935 + AluSg SINE Alu 1 296 -14 363 306 213 6 chr5 151164667 151164850 -48465300 - MIR SINE MIR -7 255 35 180 0 0 0 chr5 151165077 151165097 -48465053 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2221 75 3 3 chr5 151165099 151165392 -48464758 - AluY SINE Alu -18 293 1 303 29 0 0 chr5 151165759 151165793 -48464357 - MSTD LTR MaLR -12 384 351 884 130 8 0 chr5 151165995 151166126 -48464024 - MSTD LTR MaLR -264 132 1 204 206 0 0 chr5 151166246 151166280 -48463870 + MER5B DNA MER1_type 1 34 -144 1841 126 32 3 chr5 151166292 151166577 -48463573 + AluSx SINE Alu 1 293 -19 1936 139 3 0 chr5 151166579 151166874 -48463276 + AluSx SINE Alu 1 296 -16 1319 201 40 7 chr5 151167116 151167394 -48462756 + AluJo SINE Alu 4 290 -22 183 42 0 0 chr5 151167970 151167994 -48462156 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1814 124 65 3 chr5 151168001 151168292 -48461858 - AluSx SINE Alu -3 309 1 2139 105 3 0 chr5 151169085 151169390 -48460760 + AluSp SINE Alu 1 306 -7 1883 125 0 31 chr5 151170020 151170157 -48459993 + AluSg SINE Alu 1 126 -184 2126 112 0 0 chr5 151170157 151170451 -48459699 + AluY SINE Alu 1 294 -17 1883 125 0 31 chr5 151170451 151170600 -48459550 + AluSg SINE Alu 126 278 -32 2237 99 3 0 chr5 151171191 151171493 -48458657 - AluSx SINE Alu -9 303 1 2230 95 0 0 chr5 151171701 151171995 -48458155 + AluSg SINE Alu 1 294 -16 227 149 0 21 chr5 151172228 151172275 -48457875 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 2366 85 0 0 chr5 151172281 151172588 -48457562 + AluSc SINE Alu 1 307 -2 953 208 52 0 chr5 151172588 151172780 -48457370 - AluJb SINE Alu -15 297 96 1287 183 106 7 chr5 151172787 151172949 -48457201 - AluJo SINE Alu -2 300 155 1973 115 0 45 chr5 151172949 151173261 -48456889 - AluSx SINE Alu -14 298 1 1287 183 106 7 chr5 151173261 151173371 -48456779 - AluJo SINE Alu -147 155 1 868 144 81 89 chr5 151173374 151173610 -48456540 - L1MB7 LINE L1 -51 6133 5900 1139 94 13 0 chr5 151173612 151173771 -48456379 - AluSc SINE Alu -17 292 132 2190 85 0 3 chr5 151173771 151174065 -48456085 - AluSc SINE Alu -12 297 5 1341 209 51 63 chr5 151174069 151174117 -48456033 - L1MB7 LINE L1 -267 5911 5864 2016 117 0 0 chr5 151174117 151174431 -48455719 - AluY SINE Alu 0 314 1 1341 209 51 63 chr5 151174431 151174793 -48455357 - L1MB7 LINE L1 -314 5864 5505 598 211 42 11 chr5 151174796 151174986 -48455164 - L1MB7 LINE L1 -789 5357 5162 213 179 51 0 chr5 151175238 151175277 -48454873 - MER5B DNA MER1_type -132 46 6 2149 93 0 10 chr5 151175326 151175627 -48454523 + AluSq SINE Alu 1 298 -15 3224 172 58 23 chr5 151175664 151176316 -48453834 - L1MB2 LINE L1 -1 6170 5496 1600 172 14 10 chr5 151176316 151176613 -48453537 - AluJo SINE Alu -7 305 8 1242 238 34 18 chr5 151176797 151177184 -48452966 - L1MB7 LINE L1 -2740 3406 3014 661 128 24 8 chr5 151177184 151177309 -48452841 + L1P4 LINE L1 5364 5490 -676 2048 114 0 3 chr5 151177475 151177774 -48452376 - AluSg SINE Alu -12 298 1 184 337 112 0 chr5 151178069 151178158 -48451992 - L2 LINE L2 -2 3270 3172 1762 154 0 7 chr5 151178643 151178929 -48451221 + AluSx SINE Alu 1 284 -28 1915 120 17 20 chr5 151178929 151179228 -48450922 - AluSx SINE Alu -6 306 9 1854 152 67 95 chr5 151179611 151179755 -48450395 - L1MB8 LINE L1 -120 6058 5911 2079 125 0 6 chr5 151179755 151180067 -48450083 - AluSg SINE Alu 0 310 1 1854 152 67 95 chr5 151180067 151180448 -48449702 - L1MB8 LINE L1 -267 5911 5548 1571 146 0 16 chr5 151180511 151180764 -48449386 - AluSx SINE Alu -26 286 38 180 0 0 0 chr5 151180764 151180784 -48449366 + (TG)n Simple_repeat Simple_repeat 2 21 0 1069 106 43 0 chr5 151180784 151180945 -48449205 - L1MA2 LINE L1 -1 6303 6136 1995 138 16 0 chr5 151181704 151182008 -48448142 - AluSx SINE Alu -3 309 1 400 134 15 30 chr5 151182128 151182195 -48447955 + AluJ/FLAM SINE Alu 1 66 -236 893 173 13 0 chr5 151182431 151182587 -48447563 + FRAM SINE Alu 5 162 -14 1350 170 71 25 chr5 151182601 151182884 -48447266 - AluJb SINE Alu -16 296 1 1386 173 38 8 chr5 151182885 151183151 -48446999 - L1MB3 LINE L1 -124 6059 5786 1890 91 94 0 chr5 151183652 151183927 -48446223 + AluSg SINE Alu 1 301 -9 306 0 0 0 chr5 151184898 151184932 -48445218 + (TA)n Simple_repeat Simple_repeat 2 35 0 1819 153 7 7 chr5 151184932 151185239 -48444911 - AluJb SINE Alu -5 307 1 21 0 0 0 chr5 151185490 151185511 -48444639 + AT_rich Low_complexity Low_complexity 1 21 0 411 73 0 0 chr5 151185721 151185776 -48444374 + (TG)n Simple_repeat Simple_repeat 1 55 0 2026 131 3 3 chr5 151186770 151187082 -48443068 - AluJb SINE Alu 0 312 1 1541 187 24 7 chr5 151187082 151187241 -48442909 - AluJo SINE Alu -13 299 131 2373 76 3 0 chr5 151187241 151187544 -48442606 - AluSq SINE Alu -8 305 2 1541 187 24 7 chr5 151187544 151187678 -48442472 - AluJo SINE Alu -181 131 1 216 111 0 0 chr5 151187680 151187716 -48442434 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 275 289 201 13 chr5 151191346 151191505 -48438645 - MIR SINE MIR -46 216 28 196 244 11 100 chr5 151192535 151192589 -48437561 + MIR3 SINE MIR 11 55 -153 1941 113 17 0 chr5 151192589 151192881 -48437269 + AluSx SINE Alu 2 298 -14 196 244 11 100 chr5 151192881 151192916 -48437234 + MIR3 SINE MIR 55 92 -116 205 284 147 69 chr5 151192980 151193096 -48437054 + MIR SINE MIR 22 146 -62 248 237 0 34 chr5 151193561 151193620 -48436530 - MIR SINE MIR -182 80 24 1771 130 0 74 chr5 151193888 151194114 -48436036 - AluJb SINE Alu -13 299 103 2192 83 0 20 chr5 151194114 151194414 -48435736 - AluY SINE Alu -17 294 1 1771 130 0 74 chr5 151194414 151194510 -48435640 - AluJb SINE Alu -209 103 1 411 294 55 18 chr5 151194514 151194677 -48435473 - MIR3 SINE MIR -17 191 23 340 331 142 0 chr5 151195536 151195705 -48434445 - L2 LINE L2 0 3272 3080 293 44 67 0 chr5 151195850 151195895 -48434255 + T-rich Low_complexity Low_complexity 3 50 0 2438 71 0 0 chr5 151195899 151196208 -48433942 - AluSc SINE Alu 0 309 1 284 138 0 0 chr5 151196250 151196312 -48433838 - L1MB7 LINE L1 0 6178 6117 713 114 19 0 chr5 151196377 151196482 -48433668 + AluSg/x SINE Alu 199 305 -7 817 209 70 100 chr5 151196484 151196615 -48433535 - L1ME1 LINE L1 -79 6087 5954 2131 119 0 0 chr5 151196615 151196925 -48433225 - AluSx SINE Alu -2 310 1 817 209 70 100 chr5 151196925 151197060 -48433090 - L1ME1 LINE L1 -212 5954 5828 1686 135 36 36 chr5 151197060 151197363 -48432787 - AluJo SINE Alu -9 303 1 817 209 70 100 chr5 151197363 151197396 -48432754 - L1ME1 LINE L1 -338 5828 5796 3560 194 74 31 chr5 151197406 151197598 -48432552 + MER21B LTR ERV1 12 194 -669 2208 105 3 13 chr5 151197598 151197912 -48432238 + AluSx SINE Alu 1 311 -1 3560 194 74 31 chr5 151197912 151198487 -48431663 + MER21B LTR ERV1 194 812 -51 841 167 25 6 chr5 151198500 151198662 -48431488 - L1ME1 LINE L1 -358 5806 5642 1559 190 163 29 chr5 151198662 151198934 -48431216 - L1ME1 LINE L1 -780 5366 5132 1621 194 0 0 chr5 151198934 151199213 -48430937 + AluJo SINE Alu 3 281 -31 1559 190 163 29 chr5 151199213 151199312 -48430838 - L1ME1 LINE L1 -1014 5132 5048 1925 162 23 0 chr5 151199312 151199614 -48430536 + AluJb SINE Alu 1 309 -3 1559 190 163 29 chr5 151199614 151199726 -48430424 - L1ME1 LINE L1 -1098 5048 4817 1615 196 7 10 chr5 151199892 151200193 -48429957 - AluJb SINE Alu -8 304 5 3590 162 38 43 chr5 151200198 151200224 -48429926 - MER6 DNA MER2_type -175 690 665 1861 125 54 0 chr5 151200224 151200504 -48429646 + AluSx SINE Alu 1 295 -17 2338 81 0 0 chr5 151200512 151200819 -48429331 + AluY SINE Alu 1 307 0 3590 162 38 43 chr5 151200819 151200866 -48429284 - MER6 DNA MER2_type -207 658 612 2527 60 10 0 chr5 151200866 151201164 -48428986 + AluSp SINE Alu 1 301 -12 3590 162 38 43 chr5 151201164 151201770 -48428380 - MER6 DNA MER2_type -253 612 4 200 283 0 0 chr5 151201770 151201823 -48428327 - L2 LINE L2 -73 3199 3147 2409 77 3 10 chr5 151201851 151202164 -48427986 + AluSq SINE Alu 1 311 -2 1165 57 7 0 chr5 151202291 151202431 -48427719 - AluY SINE Alu -170 141 1 2287 86 0 7 chr5 151202707 151202999 -48427151 + AluSg SINE Alu 4 293 -17 758 83 8 0 chr5 151203544 151203664 -48426486 + (TG)n Simple_repeat Simple_repeat 2 122 0 199 209 95 76 chr5 151204449 151204554 -48425596 - L2 LINE L2 -222 3050 2944 32 43 0 0 chr5 151205027 151205073 -48425077 + GC_rich Low_complexity Low_complexity 1 46 0 24 32 0 0 chr5 151205288 151205319 -48424831 + GC_rich Low_complexity Low_complexity 1 31 0 274 263 46 46 chr5 151205503 151205655 -48424495 + MIR SINE MIR 40 191 -71 328 333 51 34 chr5 151206777 151206974 -48423176 - MIR SINE MIR -54 208 16 305 247 113 0 chr5 151207767 151207864 -48422286 - MIR SINE MIR -41 221 114 1438 120 0 19 chr5 151207905 151208114 -48422036 + AluJb SINE Alu 85 289 -23 31 44 0 0 chr5 151208201 151208246 -48421904 + AT_rich Low_complexity Low_complexity 1 45 0 402 280 27 27 chr5 151208263 151208413 -48421737 - MIR SINE MIR -112 150 1 216 0 0 0 chr5 151208819 151208843 -48421307 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 973 129 0 0 chr5 151208850 151208982 -48421168 - AluSx SINE Alu -38 274 143 1888 99 24 4 chr5 151208982 151209234 -48420916 - AluSg SINE Alu -53 257 1 1126 88 0 0 chr5 151209321 151209458 -48420692 - AluSx SINE Alu -175 137 1 2355 52 38 0 chr5 151209488 151209778 -48420372 + AluYa5 SINE Alu 1 301 -10 921 134 7 14 chr5 151210212 151210354 -48419796 + AluJb SINE Alu 1 141 -171 22 0 0 0 chr5 151210372 151210394 -48419756 + AT_rich Low_complexity Low_complexity 1 22 0 423 0 0 0 chr5 151210457 151210504 -48419646 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1904 119 21 190 chr5 151211673 151211916 -48418234 + Tigger2a DNA MER2_type 2 112 -2596 2240 124 3 0 chr5 151211916 151212223 -48417927 - AluSx SINE Alu 0 312 5 1904 119 21 190 chr5 151212223 151212500 -48417650 + Tigger2a DNA MER2_type 112 434 0 369 0 0 0 chr5 151216203 151216244 -48413906 + (TG)n Simple_repeat Simple_repeat 1 41 0 592 286 113 28 chr5 151221028 151221311 -48408839 - LTR16B LTR ERVL 0 464 158 2871 16 0 0 chr5 151221613 151221922 -48408228 - AluYb8 SINE Alu -9 309 1 1477 132 163 0 chr5 151223108 151223366 -48406784 + AluSg SINE Alu 1 300 0 1596 138 62 42 chr5 151223640 151223929 -48406221 - AluJo SINE Alu -12 300 6 1479 167 113 4 chr5 151224337 151224612 -48405538 - AluJb SINE Alu -5 307 3 1647 92 0 35 chr5 151226998 151227227 -48402923 - AluSx SINE Alu -6 306 86 608 108 0 32 chr5 151227248 151227341 -48402809 - AluSx SINE Alu -222 91 2 5250 126 35 25 chr5 151228125 151228991 -48401159 - MER4D LTR ERV1 0 903 30 26 0 0 0 chr5 151230084 151230110 -48400040 + AT_rich Low_complexity Low_complexity 1 26 0 362 295 200 26 chr5 151232116 151232306 -48397844 + MIR SINE MIR 11 233 -29 1867 116 63 36 chr5 151232713 151233015 -48397135 - AluSx SINE Alu -2 310 1 186 225 25 0 chr5 151233504 151233544 -48396606 - L2 LINE L2 -17 3255 3215 260 226 32 0 chr5 151233563 151233625 -48396525 - MIR SINE MIR -120 142 79 1171 271 150 63 chr5 151234427 151235081 -48395069 - MER21B LTR ERV1 -131 732 22 2138 119 7 0 chr5 151235654 151235949 -48394201 + AluSx SINE Alu 1 297 -15 662 95 0 11 chr5 151235988 151236083 -48394067 + MER4A LTR ERV1 1 94 -570 1928 120 35 28 chr5 151236087 151236430 -48393720 + MER4A LTR ERV1 261 664 0 252 101 58 72 chr5 151236481 151236504 -48393646 + Charlie5 DNA MER1_type 2426 2448 -176 2221 112 6 13 chr5 151236504 151236817 -48393333 - AluSx SINE Alu -1 311 1 252 101 58 72 chr5 151236817 151236862 -48393288 + Charlie5 DNA MER1_type 2448 2493 -131 850 127 0 0 chr5 151236910 151237028 -48393122 + AluJo/FLAM SINE Alu 1 118 -184 1600 129 4 46 chr5 151237030 151237310 -48392840 - AluSx SINE Alu -44 268 1 180 0 0 0 chr5 151237312 151237332 -48392818 + (T)n Simple_repeat Simple_repeat 1 20 0 1535 164 48 45 chr5 151237337 151237647 -48392503 + AluJb SINE Alu 1 311 -1 24 0 0 0 chr5 151237992 151238016 -48392134 + GC_rich Low_complexity Low_complexity 1 24 0 2105 125 110 38 chr5 151238678 151239077 -48391073 + MSTA LTR MaLR 1 428 0 522 95 0 14 chr5 151239240 151239314 -48390836 + AluJ/FRAM SINE Alu 226 298 -14 733 301 91 73 chr5 151239327 151240510 -48389640 - L1MEd LINE L1 -4870 1249 98 520 220 28 21 chr5 151240503 151240644 -48389506 - L1MB7 LINE L1 -2 6182 6041 * 186 43 0 0 chr5 151241811 151241834 -48388316 + (TTCTC)n Simple_repeat Simple_repeat 3 25 0 1945 136 10 10 chr5 151241854 151242156 -48387994 - AluSx SINE Alu -10 302 1 1048 185 10 30 chr5 151242182 151242382 -48387768 - AluJo SINE Alu -73 239 44 2627 33 3 3 chr5 151243112 151243413 -48386737 - AluY SINE Alu -8 303 3 1607 178 0 21 chr5 151245371 151245509 -48384641 + AluJb SINE Alu 1 140 -172 2531 62 0 0 chr5 151245509 151245808 -48384342 + AluY SINE Alu 1 300 -7 192 40 0 0 chr5 151245808 151245833 -48384317 + (CATA)n Simple_repeat Simple_repeat 2 26 0 1607 178 0 21 chr5 151245837 151245985 -48384165 + AluJb SINE Alu 140 281 -31 2192 132 7 0 chr5 151247706 151248016 -48382134 - AluSx SINE Alu 0 312 1 248 327 26 0 chr5 151248045 151248158 -48381992 - Charlie8 DNA MER1_type -2278 139 24 2284 100 0 10 chr5 151248666 151248975 -48381175 - AluSx SINE Alu -4 308 3 1362 176 0 9 chr5 151249687 151249909 -48380241 - AluJb SINE Alu -88 224 5 1907 129 75 0 chr5 151249915 151250193 -48379957 - AluSg SINE Alu -11 299 1 1684 170 12 0 chr5 151250337 151250596 -48379554 + AluJo SINE Alu 15 276 -36 24 0 0 0 chr5 151250946 151250970 -48379180 + AT_rich Low_complexity Low_complexity 1 24 0 1494 178 76 7 chr5 151251301 151251577 -48378573 - AluJb SINE Alu -17 295 1 505 212 52 77 chr5 151252170 151252596 -48377554 - L1M4 LINE L1 -2527 3619 2950 1370 235 204 30 chr5 151252605 151252894 -48377256 - L2 LINE L2 -251 3062 2825 1691 192 10 0 chr5 151252894 151253185 -48376965 + AluJb SINE Alu 1 294 -18 1370 235 204 30 chr5 151253185 151253243 -48376907 - L2 LINE L2 -488 2825 2778 2058 199 82 23 chr5 151253243 151253720 -48376430 + MLT1D LTR MaLR 1 505 0 1370 235 204 30 chr5 151253720 151254215 -48375935 - L2 LINE L2 -535 2778 1984 225 209 104 43 chr5 151254225 151254340 -48375810 - L2 LINE L2 -1116 2198 2077 897 272 18 4 chr5 151254340 151254599 -48375551 + L1M4 LINE L1 3876 4138 -2008 673 339 72 60 chr5 151254901 151255253 -48374897 - L1M4 LINE L1 -1534 4612 4266 1970 120 63 14 chr5 151255253 151255537 -48374613 + AluSx SINE Alu 1 298 -14 673 339 72 60 chr5 151255537 151255800 -48374350 - L1M4 LINE L1 -1880 4266 3986 768 204 20 7 chr5 151255800 151255952 -48374198 - FRAM SINE Alu -12 154 1 673 339 72 60 chr5 151255952 151256031 -48374119 - L1M4 LINE L1 -2160 3986 3909 2185 107 0 0 chr5 151256803 151257108 -48373042 + AluY SINE Alu 1 305 0 3360 173 63 53 chr5 151257203 151257725 -48372425 + L1MB8 LINE L1 5309 5846 -332 1925 111 70 0 chr5 151257725 151257995 -48372155 + AluSg SINE Alu 1 289 -21 3360 173 63 53 chr5 151257995 151258323 -48371827 + L1MB8 LINE L1 5846 6169 -9 794 137 8 8 chr5 151258333 151258464 -48371686 - AluJo/FLAM SINE Alu -170 132 2 1237 199 0 5 chr5 151258464 151258675 -48371475 - AluJo SINE Alu -14 298 87 28 0 0 26 chr5 151258675 151258697 -48371453 + AT_rich Low_complexity Low_complexity 1 23 -15 2303 109 6 6 chr5 151258697 151259010 -48371140 - AluSp SINE Alu 0 313 1 28 0 0 26 chr5 151259010 151259026 -48371124 + AT_rich Low_complexity Low_complexity 23 38 0 2482 87 0 10 chr5 151261905 151262217 -48367933 - AluSq SINE Alu -4 309 1 2342 92 0 3 chr5 151263534 151263827 -48366323 - AluSc SINE Alu -7 302 11 330 395 57 0 chr5 151264052 151264229 -48365921 + L1MC/D LINE L1 5513 5699 -422 300 320 23 31 chr5 151264234 151264362 -48365788 + L1MC/D LINE L1 5735 5861 -1947 937 120 0 0 chr5 151265452 151265585 -48364565 - AluSg/x SINE Alu -2 308 176 180 143 0 0 chr5 151266191 151266233 -48363917 + (T)n Simple_repeat Simple_repeat 1 42 0 424 296 260 12 chr5 151267902 151268314 -48361836 + L2 LINE L2 627 1140 -2174 235 272 32 56 chr5 151268485 151268610 -48361540 + L2 LINE L2 1460 1581 -1733 300 187 33 33 chr5 151268688 151268779 -48361371 + L2 LINE L2 2064 2154 -1160 952 301 130 16 chr5 151268822 151269646 -48360504 + L2 LINE L2 2353 3278 -35 333 0 0 0 chr5 151269648 151269685 -48360465 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 2311 93 0 10 chr5 151270590 151270892 -48359258 + AluSx SINE Alu 3 301 -11 909 158 0 7 chr5 151274925 151275064 -48355086 + AluSg/x SINE Alu 138 275 -37 230 29 59 0 chr5 151275068 151275102 -48355048 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 209 159 159 0 chr5 151277613 151277682 -48352468 + L2 LINE L2 2010 2089 -1225 200 297 47 47 chr5 151277760 151277952 -48352198 + L2 LINE L2 2258 2449 -865 1007 233 156 29 chr5 151278104 151278482 -48351668 - MLT1F LTR MaLR -72 470 45 350 239 260 8 chr5 151278530 151278830 -48351320 + L2 LINE L2 2683 3049 -264 837 147 0 22 chr5 151278834 151278970 -48351180 + FLAM_C SINE Alu 1 133 0 1815 235 80 22 chr5 151280332 151281018 -48349132 + MER63C DNA MER1_type 1 767 -163 1312 247 69 59 chr5 151281038 151281515 -48348635 - L1ME1 LINE L1 -18 6148 5667 689 137 36 58 chr5 151281515 151281654 -48348496 - AluSq/x SINE Alu -175 137 2 1079 196 98 27 chr5 151281669 151282037 -48348113 + L1M4 LINE L1 4945 5338 -808 1003 122 36 0 chr5 151282038 151282177 -48347973 + AluSg/x SINE Alu 154 297 -13 3847 214 173 75 chr5 151282178 151283312 -48346838 - L1ME1 LINE L1 -1214 4932 3910 2255 83 4 4 chr5 151283312 151283590 -48346560 + AluSg SINE Alu 1 278 -32 284 0 28 0 chr5 151283590 151283626 -48346524 + (GAAAA)n Simple_repeat Simple_repeat 1 37 0 3847 214 173 75 chr5 151283626 151283865 -48346285 - L1ME1 LINE L1 -2236 3910 3696 1567 204 56 44 chr5 151283865 151284364 -48345786 + MLT1D LTR MaLR 1 505 0 3847 214 173 75 chr5 151284364 151284685 -48345465 - L1ME1 LINE L1 -2450 3696 3071 369 168 63 21 chr5 151284686 151284781 -48345369 + MER63C DNA MER1_type 779 877 -53 1853 155 17 7 chr5 151285218 151285508 -48344642 + AluJo SINE Alu 1 293 -19 261 167 93 0 chr5 151285917 151285971 -48344179 + L2 LINE L2 3255 3313 0 278 188 0 0 chr5 151287590 151287638 -48342512 + MIR SINE MIR 95 142 -66 257 224 52 95 chr5 151288692 151288808 -48341342 - MIR SINE MIR -126 136 26 246 269 213 9 chr5 151289571 151289679 -48340471 - L2 LINE L2 0 3272 3143 367 284 28 28 chr5 151289701 151289842 -48340308 + MIR SINE MIR 6 146 -116 759 247 29 16 chr5 151290656 151290998 -48339152 + MSTD LTR MaLR 1 396 0 1755 166 57 3 chr5 151291469 151291765 -48338385 + AluJb SINE Alu 1 312 0 239 261 109 34 chr5 151294419 151294538 -48335612 + L2 LINE L2 3144 3271 -1 883 203 6 0 chr5 151297605 151297768 -48332382 - MER45A DNA AcHobo 0 178 15 2310 112 3 0 chr5 151298398 151298693 -48331457 + AluSx SINE Alu 1 296 -16 209 119 0 24 chr5 151298731 151298773 -48331377 + (CAAAAA)n Simple_repeat Simple_repeat 5 45 0 207 88 29 0 chr5 151299020 151299054 -48331096 + (CA)n Simple_repeat Simple_repeat 2 36 0 1533 146 87 59 chr5 151299225 151299512 -48330638 + AluJb SINE Alu 1 295 -17 1019 189 151 7 chr5 151299540 151299825 -48330325 - L1MC4 LINE L1 -22 8020 7695 712 159 0 38 chr5 151299857 151299989 -48330161 - FLAM_C SINE Alu -10 133 7 3107 214 57 28 chr5 151299996 151300490 -48329660 - L1MC4 LINE L1 -332 7710 7179 1366 158 0 21 chr5 151300490 151300731 -48329419 + MER46A DNA MER2_type 1 236 0 3107 214 57 28 chr5 151300731 151301103 -48329047 - L1MC4 LINE L1 -863 7179 6819 278 314 17 42 chr5 151301107 151301225 -48328925 + MER5A DNA MER1_type 41 160 -23 416 318 127 59 chr5 151301278 151301926 -48328224 - L3 LINE CR1 -82 1495 804 607 325 78 54 chr5 151302093 151302350 -48327800 - L3 LINE CR1 -792 785 513 1614 123 3 111 chr5 151302350 151302691 -48327459 - AluSx SINE Alu -8 304 1 607 325 78 54 chr5 151302691 151302842 -48327308 - L3 LINE CR1 -1064 513 367 449 214 79 24 chr5 151302847 151302973 -48327177 + L1ME3A LINE L1 6009 6141 -29 189 0 0 0 chr5 151303889 151303910 -48326240 + (T)n Simple_repeat Simple_repeat 1 21 0 756 253 30 55 chr5 151304296 151304533 -48325617 + MIR SINE MIR 31 261 -1 182 288 17 17 chr5 151305981 151306040 -48324110 + L3b LINE CR1 1405 1463 -120 623 122 20 0 chr5 151307378 151307476 -48322674 + MER94 DNA DNA 1 100 -34 269 250 125 21 chr5 151307666 151307762 -48322388 + MIR SINE MIR 20 125 -137 533 174 20 0 chr5 151307856 151307954 -48322196 - MER94 DNA DNA -34 100 1 326 220 275 0 chr5 151307970 151308061 -48322089 + MIR SINE MIR 119 234 -28 693 232 25 9 chr5 151308622 151308789 -48321361 - MIR SINE MIR -45 217 54 1006 218 0 0 chr5 151309126 151309314 -48320836 + MER5A DNA MER1_type 1 188 -1 226 167 37 56 chr5 151310188 151310242 -48319908 - L1M2b LINE L1 -5649 1560 1508 227 293 66 95 chr5 151310388 151310692 -48319458 + L2 LINE L2 2951 3245 -27 1218 78 41 78 chr5 151312640 151312859 -48317291 + AluSq SINE Alu 89 299 -14 414 273 50 0 chr5 151312871 151312992 -48317158 - MLT1K LTR MaLR -340 248 122 467 67 13 27 chr5 151315072 151315147 -48315003 + L1PA5 LINE L1 6081 6154 0 28 29 0 0 chr5 151315252 151315287 -48314863 + AT_rich Low_complexity Low_complexity 1 35 0 1392 188 71 7 chr5 151315391 151315673 -48314477 - AluJb SINE Alu -12 300 1 811 151 7 7 chr5 151315675 151315814 -48314336 - AluJo SINE Alu -173 139 1 21 0 0 0 chr5 151315850 151315871 -48314279 + AT_rich Low_complexity Low_complexity 1 21 0 479 254 61 61 chr5 151316741 151316906 -48313244 - MIR SINE MIR -25 237 73 1087 258 70 11 chr5 151317465 151317910 -48312240 + MLT1F LTR MaLR 1 540 -2 186 257 10 129 chr5 151318184 151318240 -48311910 - MIR SINE MIR -15 247 207 2188 97 0 7 chr5 151318240 151318538 -48311612 - AluSx SINE Alu -10 302 7 186 257 10 129 chr5 151318538 151318582 -48311568 - MIR SINE MIR -55 207 159 * 278 139 0 0 chr5 151318581 151318624 -48311526 + L2 LINE L2 3271 3313 0 21 36 0 0 chr5 151318755 151318783 -48311367 + AT_rich Low_complexity Low_complexity 1 28 0 194 317 10 67 chr5 151319268 151319372 -48310778 + L3b LINE CR1 1350 1447 -136 944 174 0 30 chr5 151319398 151319565 -48310585 - FRAM SINE Alu 0 166 5 880 288 74 7 chr5 151319566 151319973 -48310177 + L2 LINE L2 2684 3132 -181 4197 173 76 6 chr5 151319990 151320830 -48309320 - L1MB8 LINE L1 -10 6168 5270 704 184 28 50 chr5 151320822 151320978 -48309172 - L1MB8 LINE L1 -825 5321 5163 * 195 69 0 0 chr5 151320978 151321007 -48309143 + (TTTAA)n Simple_repeat Simple_repeat 3 31 0 2197 77 3 0 chr5 151321007 151321292 -48308858 - AluSc SINE Alu -23 286 1 704 184 28 50 chr5 151321292 151321313 -48308837 - L1MB8 LINE L1 -981 5165 5147 359 225 62 0 chr5 151321362 151321442 -48308708 + L2 LINE L2 3182 3266 -6 1057 153 12 0 chr5 151321442 151321612 -48308538 - AluJb SINE Alu -21 291 120 232 154 0 0 chr5 151322098 151322137 -48308013 - L1M4 LINE L1 -417 5757 5719 1969 132 0 26 chr5 151322852 151323163 -48306987 + AluSx SINE Alu 1 303 -9 725 294 22 22 chr5 151323808 151324036 -48306114 + MIR SINE MIR 14 241 -21 2055 120 0 7 chr5 151324848 151325156 -48304994 + AluSx SINE Alu 5 310 -2 2337 75 0 0 chr5 151325156 151325461 -48304689 + AluY SINE Alu 1 305 -6 2124 112 0 34 chr5 151326265 151326588 -48303562 - AluSx SINE Alu 0 312 1 1456 140 48 12 chr5 151328989 151329318 -48300832 - AluJb SINE Alu 0 361 24 2006 113 14 3 chr5 151329770 151330062 -48300088 - AluSq SINE Alu -18 295 1 1168 168 10 0 chr5 151330603 151330800 -48299350 + AluJo SINE Alu 84 282 -30 970 102 0 7 chr5 151331196 151331333 -48298817 + AluSq/x SINE Alu 1 136 -177 254 224 0 13 chr5 151331463 151331539 -48298611 + GA-rich Low_complexity Low_complexity 4 78 0 1320 176 106 0 chr5 151332388 151332644 -48297506 - AluJb SINE Alu -16 296 14 1784 123 0 0 chr5 151332690 151332941 -48297209 - AluSq SINE Alu -58 255 5 305 288 213 31 chr5 151334249 151334409 -48295741 + MIR SINE MIR 20 208 -54 1468 99 18 9 chr5 151334583 151334805 -48295345 + L1PB1 LINE L1 5928 6151 0 33 0 0 0 chr5 151334811 151334844 -48295306 + AT_rich Low_complexity Low_complexity 1 33 0 976 242 129 62 chr5 151334917 151335367 -48294783 + MLT1J LTR MaLR 8 487 -24 2134 219 91 22 chr5 151335394 151335901 -48294249 + MLT1E LTR MaLR 52 593 0 853 283 133 21 chr5 151335971 151336579 -48293571 + L1ME LINE L1 4016 4691 -1455 * 5432 139 26 47 chr5 151336575 151336626 -48293524 - L1MA4 LINE L1 -4 6296 6245 3170 90 43 24 chr5 151336626 151337094 -48293056 - L1PA10 LINE L1 -8 6160 5684 5432 139 26 47 chr5 151337094 151337180 -48292970 - L1MA4 LINE L1 -55 6245 6159 2196 77 25 0 chr5 151337180 151337466 -48292684 - AluSp SINE Alu -16 297 5 5432 139 26 47 chr5 151337466 151338443 -48291707 - L1MA4 LINE L1 -141 6159 5163 2384 86 0 0 chr5 151338443 151338747 -48291403 - AluSc SINE Alu -5 304 1 5432 139 26 47 chr5 151338747 151338871 -48291279 - L1MA4 LINE L1 -1137 5163 5038 1639 185 11 0 chr5 151338871 151339157 -48290993 - AluJo SINE Alu -21 291 3 5432 139 26 47 chr5 151339157 151339502 -48290648 - L1MA4 LINE L1 -1262 5038 4755 1943 129 14 0 chr5 151339502 151339788 -48290362 - AluSx SINE Alu -22 290 1 5432 139 26 47 chr5 151339788 151340047 -48290103 - L1MA4 LINE L1 -1545 4755 4492 1821 188 49 54 chr5 151340048 151340099 -48290051 - MSTB LTR MaLR 0 426 376 1520 173 48 4 chr5 151340099 151340397 -48289753 - AluJb SINE Alu 0 310 1 1821 188 49 54 chr5 151340397 151340732 -48289418 - MSTB LTR MaLR -50 376 41 2238 107 7 0 chr5 151340777 151341086 -48289064 - AluSq SINE Alu -2 311 1 385 141 2 10 chr5 151341086 151341140 -48289010 - MSTB LTR MaLR -322 53 1 1235 145 45 48 chr5 151341147 151341301 -48288849 - L1MA4 LINE L1 -1658 4488 4334 1176 216 47 34 chr5 151341301 151341598 -48288552 + AluJo SINE Alu 1 301 -1 1235 145 45 48 chr5 151341598 151341712 -48288438 - L1MA4 LINE L1 -1812 4334 4221 692 189 49 0 chr5 151341713 151341835 -48288315 + FRAM SINE Alu 33 160 -16 2317 164 0 0 chr5 151341855 151342233 -48287917 - L1MA4 LINE L1 -1955 4191 3814 935 285 95 9 chr5 151342237 151342784 -48287366 + L1ME LINE L1 4679 5272 -874 22 0 0 0 chr5 151342823 151342845 -48287305 + AT_rich Low_complexity Low_complexity 1 22 0 789 263 40 67 chr5 151343023 151343399 -48286751 + L1ME LINE L1 5392 5757 -405 2111 93 3 0 chr5 151343557 151343847 -48286303 + AluSg SINE Alu 4 294 -16 1835 152 3 3 chr5 151343858 151344154 -48285996 + AluJb SINE Alu 1 296 -16 21 71 0 0 chr5 151344345 151344387 -48285763 + AT_rich Low_complexity Low_complexity 1 42 0 1460 272 54 10 chr5 151344573 151344981 -48285169 - L1M4b LINE L1 -5810 1049 624 1243 282 84 48 chr5 151345021 151345542 -48284608 - L1M4b LINE L1 -6308 551 12 825 157 0 0 chr5 151346109 151346230 -48283920 - FLAM_C SINE Alu -12 121 1 729 248 130 46 chr5 151346250 151346622 -48283528 - L1MEd LINE L1 -4867 1252 903 2501 158 48 57 chr5 151346623 151347186 -48282964 + L1MA8 LINE L1 5733 6290 -1 207 0 0 0 chr5 151347353 151347376 -48282774 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 40122 27 27 2 chr5 151347384 151353416 -48276734 - L1PA2 LINE L1 -3 6152 4 29 0 0 0 chr5 151353416 151353445 -48276705 + AT_rich Low_complexity Low_complexity 1 29 0 819 132 0 0 chr5 151353445 151353559 -48276591 - FLAM_C SINE Alu -25 118 5 603 269 78 18 chr5 151353563 151353782 -48276368 - L1MEd LINE L1 -5326 793 562 326 223 22 86 chr5 151353803 151353942 -48276208 - L1MC5 LINE L1 -48 7913 7784 1589 178 4 7 chr5 151353983 151354259 -48275891 - AluJo SINE Alu -12 300 26 687 132 0 0 chr5 151354259 151354350 -48275800 + 5S rRNA rRNA 2 92 -29 283 143 0 0 chr5 151354348 151354390 -48275760 - AluJo SINE Alu -260 42 1 * 330 189 70 43 chr5 151354391 151354576 -48275574 - L1MC5 LINE L1 -203 7758 7569 1339 183 75 25 chr5 151354621 151354900 -48275250 + AluJb SINE Alu 7 299 -13 822 212 46 59 chr5 151354900 151355206 -48274944 - L1MC5 LINE L1 -411 7550 7249 247 321 48 53 chr5 151355327 151355514 -48274636 - L1MEd LINE L1 -5819 300 115 2154 93 4 0 chr5 151356043 151356313 -48273837 + AluSp SINE Alu 29 299 -14 370 300 47 32 chr5 151357067 151357257 -48272893 - L2 LINE L2 0 3313 3121 1334 253 89 32 chr5 151357344 151357870 -48272280 - MLT1L LTR MaLR -22 593 38 1015 187 6 0 chr5 151357871 151358037 -48272113 + FAM SINE Alu 1 167 -8 195 357 96 41 chr5 151358088 151358578 -48271572 - L2 LINE L2 -785 2529 2013 1850 153 7 18 chr5 151358796 151359077 -48271073 - AluJb SINE Alu -32 280 3 1667 192 20 3 chr5 151360243 151360540 -48269610 + AluJb SINE Alu 1 302 -10 276 291 79 54 chr5 151360712 151360915 -48269235 - MIR SINE MIR -34 228 21 392 169 99 0 chr5 151363841 151363912 -48266238 - MER3 DNA MER1_type -131 78 1 423 272 8 8 chr5 151364360 151364485 -48265665 + L2 LINE L2 3189 3313 0 944 232 142 17 chr5 151366571 151366916 -48263234 + L2 LINE L2 2589 2976 -338 398 244 119 60 chr5 151366927 151367128 -48263022 + L2 LINE L2 3101 3313 0 1018 234 23 31 chr5 151367199 151367457 -48262693 + MIR SINE MIR 5 261 -1 414 285 62 43 chr5 151367455 151367707 -48262443 + L2 LINE L2 2707 2970 -302 * 1257 204 9 0 chr5 151367707 151367928 -48262222 - MER58A DNA MER1_type -1 223 1 414 285 62 43 chr5 151367928 151368021 -48262129 + L2 LINE L2 2970 3060 -212 2197 122 0 3 chr5 151368249 151368552 -48261598 + AluSx SINE Alu 1 302 -10 2299 83 0 0 chr5 151370147 151370425 -48259725 + AluSg SINE Alu 1 278 -32 468 0 0 0 chr5 151370425 151370477 -48259673 + (CAAAA)n Simple_repeat Simple_repeat 5 56 0 1280 243 16 86 chr5 151370477 151370930 -48259220 - L1MD2 LINE L1 -17 6342 5922 632 184 0 0 chr5 151370930 151371033 -48259117 + AluJ SINE Alu 8 110 -202 22 35 0 0 chr5 151371037 151371066 -48259084 + AT_rich Low_complexity Low_complexity 1 29 0 2049 168 64 0 chr5 151371066 151371441 -48258709 + Tigger6a DNA MER2_type 362 760 -323 1700 174 17 7 chr5 151371441 151371728 -48258422 - AluJb SINE Alu -22 290 1 851 216 47 6 chr5 151371739 151371910 -48258240 + AluJ SINE Alu 113 290 -22 324 158 35 0 chr5 151371910 151371967 -48258183 - Tigger6 DNA MER2_type -323 1274 1216 1384 121 114 85 chr5 151371989 151372113 -48258037 + AluJb SINE Alu 24 143 -169 1805 121 33 72 chr5 151372113 151372418 -48257732 + AluSx SINE Alu 1 293 -19 1384 121 114 85 chr5 151372418 151372574 -48257576 + AluJb SINE Alu 143 312 0 605 132 107 66 chr5 151372606 151372727 -48257423 - FLAM_C SINE Alu -16 127 2 1070 149 64 25 chr5 151372728 151372963 -48257187 + Tigger6 DNA MER2_type 1351 1594 -3 9355 231 76 32 chr5 151372964 151374913 -48255237 - L1MDa LINE L1 -903 5637 3484 2230 128 0 3 chr5 151374913 151375225 -48254925 - AluSx SINE Alu -1 311 1 9355 231 76 32 chr5 151375225 151376657 -48253493 - L1MDa LINE L1 -3056 3484 2117 2811 72 19 3 chr5 151376656 151377032 -48253118 - L1P4 LINE L1 -469 5699 5318 * 2424 69 7 7 chr5 151377573 151377879 -48252271 - AluY SINE Alu -5 306 1 2807 128 47 0 chr5 151377920 151378372 -48251778 - L1P4 LINE L1 -816 5330 4858 2945 86 51 7 chr5 151378372 151378797 -48251353 + L1PA13 LINE L1 5714 6162 -1 4356 187 61 31 chr5 151378802 151379767 -48250383 - L1MDa LINE L1 -4413 2127 1138 1768 192 38 24 chr5 151379767 151380136 -48250014 - MLT1A2 LTR MaLR 0 374 1 4356 187 61 31 chr5 151380136 151380392 -48249758 - L1MDa LINE L1 -5402 1138 891 1573 287 36 97 chr5 151380610 151381684 -48248466 - L1MDa LINE L1 -5547 993 20 2036 124 0 0 chr5 151382416 151382698 -48247452 - AluSq SINE Alu 0 313 32 2107 125 3 31 chr5 151383453 151383773 -48246377 + AluSx SINE Alu 2 312 0 266 296 0 0 chr5 151384008 151384089 -48246061 - MIR3 SINE MIR -15 193 113 1108 198 175 19 chr5 151384686 151384943 -48245207 + AluJo SINE Alu 1 297 -5 263 274 29 20 chr5 151386045 151386147 -48244003 - MIR SINE MIR -2 260 158 202 258 112 0 chr5 151386297 151386386 -48243764 + L2 LINE L2 95 193 -3121 1929 285 130 43 chr5 151386445 151387005 -48243145 + L2 LINE L2 1374 1884 -1430 1835 168 30 0 chr5 151387005 151387303 -48242847 + AluJo SINE Alu 1 307 -5 1929 285 130 43 chr5 151387303 151387977 -48242173 + L2 LINE L2 1884 2759 -555 2239 95 0 17 chr5 151387977 151388273 -48241877 + AluSg SINE Alu 1 291 -19 1929 285 130 43 chr5 151388273 151388507 -48241643 + L2 LINE L2 2759 2971 -343 297 181 222 0 chr5 151388907 151388979 -48241171 + L2 LINE L2 3226 3313 0 989 160 5 57 chr5 151390065 151390259 -48239891 - AluJb SINE Alu -1 311 128 1758 163 27 7 chr5 151390300 151390600 -48239550 - AluJb SINE Alu -6 306 1 298 335 38 25 chr5 151390884 151391042 -48239108 + L3 LINE CR1 1345 1504 -73 2241 108 0 13 chr5 151391102 151391407 -48238743 - AluSx SINE Alu -11 301 1 1963 163 0 13 chr5 151391437 151391743 -48238407 + AluJo SINE Alu 1 302 -10 1615 182 46 3 chr5 151391831 151392155 -48237995 - MER58B DNA MER1_type -3 338 1 1952 109 4 0 chr5 151394367 151394624 -48235526 + AluSx SINE Alu 35 292 -20 781 326 82 11 chr5 151395187 151395764 -48234386 + L2 LINE L2 2470 3082 -190 714 204 0 8 chr5 151395930 151396062 -48234088 + AluJo/FLAM SINE Alu 2 132 -180 1552 173 45 31 chr5 151396064 151396353 -48233797 + AluJo SINE Alu 1 293 -19 217 224 13 26 chr5 151396461 151396537 -48233613 + (TAA)n Simple_repeat Simple_repeat 3 77 0 355 296 75 19 chr5 151397282 151397441 -48232709 + MLT1H LTR MaLR 1 168 -381 294 29 0 0 chr5 151397520 151397555 -48232595 + (TCTCCC)n Simple_repeat Simple_repeat 3 37 0 7185 48 4 53 chr5 151397562 151399264 -48230886 + SVA Other Other 1 1385 -1 236 203 116 0 chr5 151399327 151399396 -48230754 - LTR16A1 LTR ERVL -34 423 347 1601 183 63 3 chr5 151399641 151399941 -48230209 - MLT1A1 LTR MaLR 0 365 48 1443 172 49 9 chr5 151399943 151400270 -48229880 + L1MB7 LINE L1 5736 6107 -77 2040 199 78 80 chr5 151400293 151400895 -48229255 - L1MD3 LINE L1 -726 7269 6669 186 43 0 0 chr5 151400895 151400918 -48229232 + (TG)n Simple_repeat Simple_repeat 2 24 0 266 116 0 0 chr5 151400918 151400961 -48229189 - MLT1A1 LTR MaLR -25 340 298 216 228 0 0 chr5 151400985 151401042 -48229108 + (TA)n Simple_repeat Simple_repeat 2 58 0 2630 100 11 3 chr5 151401046 151401407 -48228743 + THE1B LTR MaLR 1 364 0 205 316 11 0 chr5 151401581 151401676 -48228474 + (TA)n Simple_repeat Simple_repeat 2 97 0 1817 186 64 48 chr5 151401676 151402176 -48227974 - L1MC4a LINE L1 -1190 6618 6111 365 109 0 0 chr5 151402557 151402612 -48227538 + L1MB8 LINE L1 6113 6167 -11 187 335 0 82 chr5 151403418 151403576 -48226574 + MIR SINE MIR 47 191 -71 184 264 73 64 chr5 151404794 151404904 -48225246 - L2 LINE L2 -21 3251 3141 340 246 167 47 chr5 151406666 151406881 -48223269 + MIR SINE MIR 12 252 -10 692 153 0 0 chr5 151408293 151408391 -48221759 - AluJb SINE Alu -19 293 196 251 146 0 0 chr5 151408542 151408583 -48221567 - L2 LINE L2 -6 3266 3226 1339 145 10 0 chr5 151408634 151408841 -48221309 - AluJb SINE Alu -11 301 93 883 277 48 3 chr5 151409631 151409974 -48220176 + L1MC5 LINE L1 5490 5802 -319 201 147 0 0 chr5 151410579 151410613 -48219537 + (A)n Simple_repeat Simple_repeat 1 34 0 1799 150 0 87 chr5 151410908 151411242 -48218908 + AluJo SINE Alu 1 305 -7 836 309 58 19 chr5 151411527 151411941 -48218209 + HAL1b LINE L1 211 640 -708 2220 202 125 72 chr5 151412338 151413208 -48216942 + L1MC5 LINE L1 6617 7532 -429 399 274 145 17 chr5 151413289 151413468 -48216682 + L1ME3A LINE L1 5962 6163 -7 2366 91 0 0 chr5 151413596 151413893 -48216257 - AluSg1 SINE Alu -11 298 2 23 0 0 0 chr5 151413897 151413920 -48216230 + AT_rich Low_complexity Low_complexity 1 23 0 5561 132 26 42 chr5 151414299 151415589 -48214561 + L1MA8 LINE L1 4811 6120 -171 1717 95 171 4 chr5 151415589 151415841 -48214309 + AluSq SINE Alu 1 294 -19 5561 132 26 42 chr5 151415841 151415989 -48214161 + L1MA8 LINE L1 6120 6221 -70 1967 168 0 0 chr5 151415989 151416286 -48213864 - AluJo SINE Alu -15 297 1 5561 132 26 42 chr5 151416286 151416347 -48213803 + L1MA8 LINE L1 6221 6281 -10 23 54 0 0 chr5 151416353 151416390 -48213760 + AT_rich Low_complexity Low_complexity 1 37 0 2247 117 3 0 chr5 151416752 151417052 -48213098 - AluSg SINE Alu -9 301 1 2027 121 7 24 chr5 151418778 151419075 -48211075 + AluSg SINE Alu 1 292 -18 730 209 0 0 chr5 151420091 151420220 -48209930 + FLAM_C SINE Alu 1 129 -4 1142 167 34 10 chr5 151420824 151421028 -48209122 + MER3 DNA MER1_type 1 209 0 1051 179 0 0 chr5 151423183 151423351 -48206799 - AluJb SINE Alu -11 301 134 2479 91 0 0 chr5 151423526 151423835 -48206315 + AluSx SINE Alu 1 309 -3 315 216 122 0 chr5 151423998 151424072 -48206078 - MIR SINE MIR -54 208 126 6323 17 0 2 chr5 151425232 151426103 -48204047 - L1P1 LINE L1 -624 5531 4663 5786 8 0 0 chr5 151426092 151426725 -48203425 + L1HS LINE L1 5521 6153 -2 * 22 0 0 0 chr5 151426725 151426747 -48203403 + AT_rich Low_complexity Low_complexity 1 22 0 1959 137 6 40 chr5 151427908 151428230 -48201920 + AluJb SINE Alu 2 312 0 1149 113 43 43 chr5 151428273 151428458 -48201692 - AluSp SINE Alu 0 313 129 2037 117 18 0 chr5 151428563 151428845 -48201305 + AluSx SINE Alu 1 287 -25 42 20 0 0 chr5 151428846 151428895 -48201255 + AT_rich Low_complexity Low_complexity 1 49 0 685 197 0 0 chr5 151428895 151429012 -48201138 - FLAM_C SINE Alu -25 118 2 975 129 0 7 chr5 151429297 151429437 -48200713 + FRAM SINE Alu 20 158 -18 182 273 0 0 chr5 151430072 151430116 -48200034 - L2 LINE L2 0 3272 3229 993 322 59 8 chr5 151430541 151430895 -48199255 + LTR16A LTR ERVL 79 450 0 262 285 122 23 chr5 151431121 151431293 -48198857 + L2 LINE L2 1264 1452 -1862 466 162 0 61 chr5 151431429 151431528 -48198622 + L1MB5 LINE L1 5747 5839 -335 1771 199 6 3 chr5 151431628 151431965 -48198185 + L1MB5 LINE L1 5837 6174 0 197 348 101 19 chr5 151432137 151432344 -48197806 + L2 LINE L2 1932 2155 -1159 257 333 0 0 chr5 151432442 151432544 -48197606 + L1MC/D LINE L1 4735 4836 -1310 340 356 0 52 chr5 151432696 151432709 -48197441 + L1MC/D LINE L1 4884 4896 -1250 1695 163 24 14 chr5 151432709 151432997 -48197153 - AluJo SINE Alu -21 291 1 340 356 0 52 chr5 151432997 151433213 -48196937 + L1MC/D LINE L1 4896 5101 -1045 662 265 24 16 chr5 151433317 151433624 -48196526 + L1MC/D LINE L1 5146 5463 -747 549 248 0 25 chr5 151433648 151433769 -48196381 + L1MC/D LINE L1 5540 5657 -2151 1002 208 14 32 chr5 151433771 151433987 -48196163 + MLT1E2 LTR MaLR 401 612 -14 1088 126 98 0 chr5 151434920 151435094 -48195056 + MSTD LTR MaLR 1 191 -205 530 160 50 76 chr5 151435095 151435214 -48194936 + FLAM_A SINE Alu 1 116 -26 837 233 18 27 chr5 151435230 151435449 -48194701 + MSTD LTR MaLR 180 396 0 739 280 36 11 chr5 151436384 151436659 -48193491 - L2 LINE L2 -2 3311 3030 2691 165 38 46 chr5 151436662 151437249 -48192901 - L1MD3 LINE L1 -13 7982 7401 321 224 92 0 chr5 151437254 151437330 -48192820 - MLT1F1 LTR MaLR -450 117 35 2064 128 17 0 chr5 151437351 151437649 -48192501 - AluSx SINE Alu -9 303 1 1128 142 4 27 chr5 151437688 151437951 -48192199 + AluJb SINE Alu 1 311 -1 4781 186 30 35 chr5 151437972 151439475 -48190675 + L1M1 LINE L1 21 1637 -5928 7058 111 17 36 chr5 151439477 151439568 -48190582 + L1MA2 LINE L1 4232 4323 -1981 2127 122 17 0 chr5 151439568 151439864 -48190286 - AluSg SINE Alu -9 301 1 7058 111 17 36 chr5 151439864 151440898 -48189252 + L1MA2 LINE L1 4323 5321 -983 2326 114 0 0 chr5 151440898 151441205 -48188945 - AluSx SINE Alu -5 307 1 7058 111 17 36 chr5 151441205 151442169 -48187981 + L1MA2 LINE L1 5321 6302 -2 606 167 27 8 chr5 151442171 151442325 -48187825 - L1MC3 LINE L1 -756 7029 6914 2270 259 124 9 chr5 151442329 151443147 -48187003 - L2 LINE L2 -277 3036 2111 219 170 19 38 chr5 151443666 151443719 -48186431 + L2 LINE L2 3254 3305 -8 359 251 133 80 chr5 151444131 151444581 -48185569 + L1ME4a LINE L1 5648 6121 0 200 167 0 0 chr5 151444581 151444611 -48185539 + polypurine Low_complexity Low_complexity 2 31 0 2552 77 3 3 chr5 151444790 151445102 -48185048 - AluSp SINE Alu -1 312 1 2033 160 36 26 chr5 151449439 151449826 -48180324 - L1MD3 LINE L1 -10 7985 7595 666 275 60 24 chr5 151449852 151450103 -48180047 - MIR SINE MIR 0 262 3 21 0 0 0 chr5 151451782 151451803 -48178347 + AT_rich Low_complexity Low_complexity 1 21 0 2333 104 0 0 chr5 151451977 151452275 -48177875 + AluSg SINE Alu 1 298 -12 9494 44 15 96 chr5 151453914 151454768 -48175382 + SVA Other Other 12 630 -1276 24 91 0 0 chr5 151454768 151454834 -48175316 + GC_rich Low_complexity Low_complexity 1 66 0 9494 44 15 96 chr5 151454834 151455535 -48174615 + SVA Other Other 630 1386 -520 245 259 0 0 chr5 151456211 151456269 -48173881 + L3b LINE CR1 1252 1309 -274 2590 204 55 94 chr5 151457430 151458199 -48171951 + MER21B LTR ERV1 1 739 -124 754 175 36 0 chr5 151458832 151458969 -48171181 - FAM SINE Alu -42 143 2 708 260 11 30 chr5 151458989 151459192 -48170958 - MIR SINE MIR 0 262 63 568 224 87 19 chr5 151459434 151459595 -48170555 + MIR SINE MIR 1 172 -90 407 333 64 26 chr5 151460571 151460805 -48169345 - MIR SINE MIR -16 246 4 1851 149 0 0 chr5 151461673 151461961 -48168189 + AluJb SINE Alu 1 288 -24 663 265 71 0 chr5 151462526 151462696 -48167454 + MIR SINE MIR 78 259 -3 238 284 42 32 chr5 151464340 151464435 -48165715 - MIR SINE MIR 0 262 167 1802 158 0 7 chr5 151464505 151464803 -48165347 + AluJo SINE Alu 1 296 -16 475 250 144 32 chr5 151465052 151465240 -48164910 + MIR SINE MIR 3 211 -51 311 260 120 0 chr5 151465532 151465632 -48164518 + L2 LINE L2 3158 3269 -3 410 196 196 103 chr5 151465852 151466056 -48164094 - MER102b DNA MER1_type -16 325 103 870 148 0 0 chr5 151466102 151466244 -48163906 - FLAM_C SINE Alu -1 142 1 307 273 20 96 chr5 151466649 151466898 -48163252 + MARNA DNA Mariner 224 453 -133 402 301 157 35 chr5 151466920 151467149 -48163001 - MIR SINE MIR 0 262 6 450 268 71 42 chr5 151467756 151467924 -48162226 - MIR SINE MIR 0 262 90 742 209 41 23 chr5 151469505 151469677 -48160473 + MIR SINE MIR 59 233 -29 1299 188 0 40 chr5 151470595 151470871 -48159279 + AluJb SINE Alu 44 308 -4 3263 189 57 30 chr5 151470878 151471061 -48159089 + L1MB4 LINE L1 4503 4680 -1466 1586 201 7 0 chr5 151471061 151471359 -48158791 + AluSx SINE Alu 1 300 -12 3263 189 57 30 chr5 151471359 151471597 -48158553 + L1MB4 LINE L1 4680 4910 -1236 1995 95 44 0 chr5 151471597 151471871 -48158279 + AluY SINE Alu 1 286 -25 3263 189 57 30 chr5 151471871 151472256 -48157894 + L1MB4 LINE L1 4910 5332 -814 1136 175 4 50 chr5 151472256 151472496 -48157654 + AluJo SINE Alu 72 300 -12 4269 142 24 15 chr5 151472498 151473243 -48156907 + L1MB4 LINE L1 5319 6070 -110 246 81 0 0 chr5 151474241 151474278 -48155872 + (CA)n Simple_repeat Simple_repeat 2 38 0 247 284 11 11 chr5 151474697 151474792 -48155358 + GA-rich Low_complexity Low_complexity 3 97 0 193 233 23 0 chr5 151476012 151476055 -48154095 - MIR SINE MIR -109 153 110 813 284 40 9 chr5 151476076 151476298 -48153852 + MIR SINE MIR 14 242 -20 1638 139 6 61 chr5 151476300 151476630 -48153520 - AluJb SINE Alu 0 312 1 2116 116 0 7 chr5 151477980 151478281 -48151869 + AluSx SINE Alu 4 302 -10 814 263 105 0 chr5 151479378 151479614 -48150536 - MIR SINE MIR 0 262 3 1971 42 0 0 chr5 151479727 151479964 -48150186 - L1PA4 LINE L1 -3 6152 5916 302 0 0 0 chr5 151479964 151479997 -48150153 + L1P LINE L1 4915 4947 -1199 292 77 39 0 chr5 151480073 151480125 -48150025 + (CA)n Simple_repeat Simple_repeat 1 54 0 316 130 29 0 chr5 151480324 151480393 -48149757 + (CA)n Simple_repeat Simple_repeat 1 71 0 592 271 94 5 chr5 151480745 151480937 -48149213 + MIR SINE MIR 40 248 -14 1226 155 0 32 chr5 151481899 151482118 -48148032 + AluSx SINE Alu 1 212 -100 465 49 0 16 chr5 151482118 151482179 -48147971 + AluSq/x SINE Alu 78 137 -175 2216 92 3 0 chr5 151482183 151482478 -48147672 + AluSx SINE Alu 1 296 -16 310 304 96 9 chr5 151483339 151483454 -48146696 + L2 LINE L2 3147 3271 -1 1498 165 14 47 chr5 151483558 151483855 -48146295 + AluJo SINE Alu 1 287 -25 4847 175 72 107 chr5 151484421 151484955 -48145195 + L1MB4 LINE L1 3574 4125 -2055 2327 72 7 7 chr5 151484955 151485262 -48144888 - AluY SINE Alu -4 307 1 4847 175 72 107 chr5 151485262 151485563 -48144587 + L1MB4 LINE L1 4125 4435 -1745 2007 132 0 3 chr5 151485563 151485866 -48144284 - AluSq SINE Alu -11 302 1 4847 175 72 107 chr5 151485866 151486374 -48143776 + L1MB4 LINE L1 4435 4959 -1221 1000 191 0 12 chr5 151486374 151486542 -48143608 + FRAM SINE Alu 1 166 0 4847 175 72 107 chr5 151486542 151486785 -48143365 + L1MB4 LINE L1 4959 5209 -971 2089 96 3 3 chr5 151486785 151487078 -48143072 + AluSq SINE Alu 1 293 -20 4847 175 72 107 chr5 151487078 151487805 -48142345 + L1MB4 LINE L1 5209 5781 -399 504 68 0 0 chr5 151487805 151487878 -48142272 + (TG)n Simple_repeat Simple_repeat 2 74 0 4847 175 72 107 chr5 151487878 151488002 -48142148 + L1MB4 LINE L1 5781 5908 -272 546 147 0 11 chr5 151488019 151488114 -48142036 + FLAM_A SINE Alu 46 139 -3 210 222 0 0 chr5 151488147 151488201 -48141949 + (TG)n Simple_repeat Simple_repeat 1 54 0 739 192 0 8 chr5 151488209 151488339 -48141811 - FLAM_C SINE Alu -13 130 2 1713 177 0 19 chr5 151488471 151488787 -48141363 + AluJb SINE Alu 1 310 -2 749 286 43 0 chr5 151488816 151489092 -48141058 - L1M4 LINE L1 -2122 4024 3737 226 246 149 61 chr5 151489148 151489262 -48140888 + L2 LINE L2 3149 3272 0 211 258 45 15 chr5 151491686 151491752 -48138398 - L2 LINE L2 0 3272 3205 985 90 0 8 chr5 151491882 151492015 -48138135 - AluSp SINE Alu -181 132 1 360 301 161 5 chr5 151493039 151493097 -48137053 + MIR SINE MIR 8 56 -206 2536 36 0 3 chr5 151493097 151493400 -48136750 - AluY SINE Alu -9 302 1 360 301 161 5 chr5 151493400 151493527 -48136623 + MIR SINE MIR 56 222 -40 698 184 209 0 chr5 151494604 151494767 -48135383 - MIR SINE MIR -12 250 54 2204 91 3 10 chr5 151494809 151494941 -48135209 + AluSc SINE Alu 1 132 -177 2065 113 0 0 chr5 151494941 151495255 -48134895 + AluSg SINE Alu 1 310 0 2204 91 3 10 chr5 151495255 151495430 -48134720 + AluSc SINE Alu 132 306 -3 22 0 0 0 chr5 151495436 151495458 -48134692 + AT_rich Low_complexity Low_complexity 1 22 0 4324 158 30 13 chr5 151495524 151495795 -48134355 - L1MB8 LINE L1 -11 6167 5902 2351 52 3 26 chr5 151495795 151496102 -48134048 - AluY SINE Alu -11 300 1 2029 134 3 3 chr5 151496102 151496408 -48133742 - AluSx SINE Alu -5 307 1 4324 158 30 13 chr5 151496408 151496895 -48133255 - L1MB8 LINE L1 -275 5903 5395 1210 173 157 0 chr5 151496936 151496949 -48133201 - AluJo SINE Alu -17 295 285 2162 96 10 6 chr5 151496949 151497261 -48132889 - AluSq SINE Alu 0 313 1 1210 173 157 0 chr5 151497261 151497502 -48132648 - AluJo SINE Alu -27 285 1 1430 101 0 0 chr5 151497651 151497840 -48132310 - AluSg SINE Alu -121 189 1 298 169 4 0 chr5 151497840 151497903 -48132247 - L1MB8 LINE L1 -779 5367 5304 704 182 0 16 chr5 151497912 151498033 -48132117 - FLAM_A SINE Alu -14 128 10 1389 180 12 0 chr5 151498046 151498301 -48131849 - L1MB8 LINE L1 -1328 4818 4561 257 194 16 16 chr5 151498356 151498418 -48131732 + GA-rich Low_complexity Low_complexity 1 62 0 422 282 8 8 chr5 151499768 151499885 -48130265 + L2 LINE L2 3197 3313 0 616 209 23 35 chr5 151500305 151500477 -48129673 + L2 LINE L2 1912 2081 -1233 2150 136 12 32 chr5 151500484 151500637 -48129513 - LTR26B LTR ERV1 0 531 376 2279 64 0 0 chr5 151500637 151500943 -48129207 - AluY SINE Alu 0 306 1 2150 136 12 32 chr5 151500943 151501133 -48129017 - LTR26B LTR ERV1 -155 376 194 769 71 45 0 chr5 151501133 151501245 -48128905 - AluSg/x SINE Alu -4 306 190 1318 103 27 0 chr5 151501245 151501429 -48128721 - LTR26B LTR ERV1 -342 189 1 1470 248 64 31 chr5 151501459 151501914 -48128236 + L2 LINE L2 2157 2626 -688 2089 96 7 23 chr5 151501975 151502278 -48127872 + AluSx SINE Alu 1 298 -14 2034 140 0 0 chr5 151502287 151502587 -48127563 + AluSx SINE Alu 1 300 -12 320 186 0 151 chr5 151502718 151502804 -48127346 - LTR8A LTR ERV1 0 727 655 1019 173 14 33 chr5 151502804 151503018 -48127132 + AluJo SINE Alu 85 294 -18 1878 199 73 101 chr5 151503018 151503661 -48126489 - LTR8A LTR ERV1 -69 658 34 1376 219 57 20 chr5 151503676 151504027 -48126123 + L1ME LINE L1 5416 5779 -383 498 172 140 0 chr5 151504030 151504123 -48126027 - MER7A DNA MER2_type 0 336 231 2029 115 0 3 chr5 151504124 151504437 -48125713 + AluSq SINE Alu 1 312 0 1141 139 0 0 chr5 151504437 151504609 -48125541 + AluSg/x SINE Alu 126 297 -15 880 111 82 0 chr5 151504609 151504744 -48125406 - MER7A DNA MER2_type -97 240 95 831 148 0 0 chr5 151504753 151504875 -48125275 + FLAM_C SINE Alu 4 125 -18 448 138 0 147 chr5 151504887 151504954 -48125196 + MER7A DNA MER2_type 14 59 -2979 2188 105 0 0 chr5 151504954 151505249 -48124901 + AluSq SINE Alu 1 295 -18 448 138 0 147 chr5 151505249 151505290 -48124860 + MER7A DNA MER2_type 59 104 -242 1816 136 0 36 chr5 151505312 151505477 -48124673 - AluSq SINE Alu -22 291 140 2091 106 16 3 chr5 151505477 151505780 -48124370 - AluSq SINE Alu -6 307 1 1816 136 0 36 chr5 151505780 151505916 -48124234 - AluSq SINE Alu -173 140 1 299 123 14 68 chr5 151505919 151505955 -48124195 + L1MB2 LINE L1 6103 6135 -36 2217 85 3 7 chr5 151505955 151506260 -48123890 + AluY SINE Alu 1 304 -7 299 123 14 68 chr5 151506260 151506296 -48123854 + L1MB2 LINE L1 6135 6171 0 565 324 54 5 chr5 151506358 151506580 -48123570 + L2 LINE L2 2900 3132 -181 2032 138 3 0 chr5 151506580 151506884 -48123266 - AluSx SINE Alu -7 305 1 2147 103 0 0 chr5 151506913 151507203 -48122947 + AluSx SINE Alu 1 290 -22 45 19 0 0 chr5 151507244 151507296 -48122854 + AT_rich Low_complexity Low_complexity 1 52 0 1063 158 58 50 chr5 151507301 151507450 -48122700 - AluJo SINE Alu -17 295 142 2266 77 0 10 chr5 151507450 151507749 -48122401 - AluY SINE Alu -15 296 1 1063 158 58 50 chr5 151507749 151507840 -48122310 - AluJo SINE Alu -170 142 53 3023 116 18 10 chr5 151507840 151508302 -48121848 + MER61E LTR ERV1 3 460 -109 2267 69 3 38 chr5 151508302 151508619 -48121531 - AluSp SINE Alu -7 306 1 2692 19 0 0 chr5 151508627 151508938 -48121212 - AluY SINE Alu 0 311 1 3023 116 18 10 chr5 151508938 151509081 -48121069 + MER61E LTR ERV1 466 569 0 230 254 16 16 chr5 151509081 151509138 -48121012 - AluJ/FLAM SINE Alu -244 58 2 683 161 17 0 chr5 151509138 151509256 -48120894 - L1MC3 LINE L1 -11 7774 7655 1310 148 24 69 chr5 151509256 151509546 -48120604 - LTR23 LTR ERV1 0 437 161 527 189 111 20 chr5 151509592 151509745 -48120405 - LTR23 LTR ERV1 -255 182 16 1607 145 120 0 chr5 151509746 151510022 -48120128 - AluJb SINE Alu -2 310 2 3605 172 55 1 chr5 151510024 151510720 -48119430 - L1MC3 LINE L1 -308 7477 6745 2082 80 0 80 chr5 151510754 151511078 -48119072 + AluSq SINE Alu 1 298 -15 559 270 20 7 chr5 151511081 151511233 -48118917 + L2 LINE L2 3160 3313 0 317 330 8 0 chr5 151511306 151511424 -48118726 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 749 332 56 49 chr5 151511429 151512016 -48118134 + L2 LINE L2 2416 3012 -260 322 214 129 0 chr5 151512094 151512164 -48117986 + MER96 DNA MER1_type? 95 173 -2 385 264 109 18 chr5 151512165 151512275 -48117875 + L2 LINE L2 3140 3259 -13 485 269 64 14 chr5 151512295 151512436 -48117714 + MIR SINE MIR 29 176 -86 381 279 195 23 chr5 151512442 151512562 -48117588 - L1M4 LINE L1 -2734 3412 3314 2131 115 0 13 chr5 151512562 151512874 -48117276 - AluSx SINE Alu -4 308 1 381 279 195 23 chr5 151512874 151512968 -48117182 - L1M4 LINE L1 -2832 3314 3161 1067 107 0 7 chr5 151512968 151513118 -48117032 - AluSq SINE Alu -39 274 126 1861 121 33 0 chr5 151513118 151513430 -48116720 - AluSx SINE Alu 0 321 1 425 228 298 6 chr5 151513433 151513604 -48116546 - L1M4 LINE L1 -3113 3033 2813 1054 183 0 5 chr5 151513604 151513795 -48116355 - AluJ SINE Alu -2 310 121 31 0 0 0 chr5 151513795 151513826 -48116324 + AT_rich Low_complexity Low_complexity 1 31 0 843 130 23 0 chr5 151513850 151513981 -48116169 - AluJ SINE Alu -178 134 1 2732 155 12 23 chr5 151514016 151514499 -48115651 + MER50 LTR ERV1 1 478 -256 1734 100 0 0 chr5 151514566 151514797 -48115353 - AluSx SINE Alu -79 233 3 1403 29 57 6 chr5 151514806 151515010 -48115140 - SVA Other Other 0 1386 1184 2566 24 0 0 chr5 151515010 151515306 -48114844 - AluYa5 SINE Alu -15 296 1 5405 57 14 7 chr5 151515306 151516519 -48113631 - SVA Other Other -875 1194 53 216 0 0 0 chr5 151516519 151516543 -48113607 + (GGGAGA)n Simple_repeat Simple_repeat 3 26 0 1123 148 0 0 chr5 151516544 151516713 -48113437 + MER50 LTR ERV1 542 710 -24 404 267 7 53 chr5 151516814 151516964 -48113186 + MIR SINE MIR 120 262 0 329 298 126 13 chr5 151517161 151517312 -48112838 + MIR SINE MIR 20 187 -75 2119 110 3 0 chr5 151517352 151517651 -48112499 - AluSx SINE Alu -8 304 5 495 107 27 0 chr5 151518583 151518658 -48111492 - U6 snRNA snRNA 0 107 31 2213 106 0 0 chr5 151518658 151518961 -48111189 - AluSc SINE Alu -6 303 1 216 0 0 0 chr5 151518961 151518985 -48111165 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1302 192 81 0 chr5 151518988 151519249 -48110901 - AluJo SINE Alu -30 282 1 325 158 66 13 chr5 151519280 151519356 -48110794 - L1ME LINE L1 -383 5779 5700 632 203 8 0 chr5 151519357 151519475 -48110675 + FLAM_C SINE Alu 2 120 -23 638 150 23 54 chr5 151519482 151519611 -48110539 - L1ME LINE L1 -451 5711 5580 1402 184 0 83 chr5 151519611 151519947 -48110203 + AluJo SINE Alu 1 308 -4 1935 115 54 0 chr5 151519947 151520080 -48110070 + AluSq SINE Alu 1 125 -188 315 0 0 0 chr5 151520080 151520115 -48110035 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1935 115 54 0 chr5 151520115 151520276 -48109874 + AluSq SINE Alu 125 311 -2 638 150 23 54 chr5 151520276 151520291 -48109859 - L1ME LINE L1 -581 5581 5567 2137 88 0 26 chr5 151520291 151520597 -48109553 + AluSg SINE Alu 3 300 -10 638 150 23 54 chr5 151520597 151520630 -48109520 - L1ME LINE L1 -595 5567 5552 215 346 0 0 chr5 151520636 151520688 -48109462 + MER5A DNA MER1_type 55 106 -83 1658 142 7 40 chr5 151520727 151521023 -48109127 - AluJo SINE Alu -9 303 18 1136 286 16 44 chr5 151521171 151521466 -48108684 - MLT1L LTR MaLR -17 598 255 2115 106 0 3 chr5 151521466 151521758 -48108392 + AluSx SINE Alu 11 301 -11 1136 286 16 44 chr5 151521758 151521898 -48108252 - MLT1L LTR MaLR -360 255 113 3487 105 8 31 chr5 151521966 151522404 -48107746 + MER9 LTR ERVK 1 427 -84 2366 78 7 0 chr5 151522404 151522713 -48107437 - AluY SINE Alu 0 311 1 3487 105 8 31 chr5 151522713 151522797 -48107353 + MER9 LTR ERVK 427 511 0 926 90 0 0 chr5 151522852 151522974 -48107176 + AluYb8 SINE Alu 1 122 -196 801 105 0 0 chr5 151523074 151523179 -48106971 - AluSq/x SINE Alu -201 112 8 279 325 103 8 chr5 151523362 151523488 -48106662 + L2 LINE L2 2601 2738 -576 942 117 0 29 chr5 151523589 151523726 -48106424 + FLAM_C SINE Alu 1 133 0 1974 128 17 0 chr5 151523772 151524070 -48106080 - AluJb SINE Alu -9 303 1 339 272 25 0 chr5 151524267 151524348 -48105802 + L2 LINE L2 3231 3313 0 683 236 108 15 chr5 151525459 151525662 -48104488 + MIR SINE MIR 30 251 -11 577 299 26 65 chr5 151525674 151525829 -48104321 + MLT1K LTR MaLR 3 162 -426 1896 167 0 0 chr5 151525829 151526129 -48104021 + AluSx SINE Alu 1 300 -12 2338 42 0 0 chr5 151526129 151526443 -48103707 + AluY SINE Alu 1 311 0 577 299 26 65 chr5 151526443 151526517 -48103633 + MLT1K LTR MaLR 160 224 -364 292 143 0 0 chr5 151526517 151526559 -48103591 + L1MB7 LINE L1 5603 5644 -540 1428 182 9 0 chr5 151526576 151526801 -48103349 + MER8 DNA MER2_type 10 236 -3 2605 146 8 46 chr5 151526802 151527160 -48102990 + L1MB7 LINE L1 5686 6021 -163 1603 169 42 0 chr5 151527160 151527444 -48102706 - AluJb SINE Alu -16 296 1 2605 146 8 46 chr5 151527444 151527584 -48102566 + L1MB7 LINE L1 6021 6165 -19 414 272 82 60 chr5 151527615 151527847 -48102303 + MLT1K LTR MaLR 216 452 -136 335 167 19 0 chr5 151527851 151527905 -48102245 - MER81 DNA DNA -4 110 56 674 189 0 0 chr5 151527982 151528093 -48102057 + MER7A DNA MER2_type 1 109 -237 1114 137 0 0 chr5 151528093 151528268 -48101882 - AluSg/x SINE Alu -4 308 134 2253 91 7 0 chr5 151528268 151528575 -48101575 - AluSx SINE Alu -3 309 1 1148 68 7 0 chr5 151528575 151528719 -48101431 + MER7A DNA MER2_type 88 232 -105 1874 110 12 64 chr5 151528719 151529113 -48101037 - Charlie3 DNA MER1_type 0 2712 1 698 159 18 0 chr5 151529113 151529224 -48100926 + MER7A DNA MER2_type 234 346 0 1879 132 10 14 chr5 151529250 151529545 -48100605 + AluSx SINE Alu 1 294 -18 1934 91 33 11 chr5 151529550 151529825 -48100325 + AluSg SINE Alu 14 294 -16 535 306 151 0 chr5 151529851 151530057 -48100093 - LTR16A LTR ERVL -5 445 209 238 348 11 33 chr5 151530062 151530154 -48099996 + L2 LINE L2 2963 3052 -220 296 211 0 0 chr5 151530292 151530349 -48099801 - MLT1H1 LTR MaLR -1 554 498 2006 133 3 3 chr5 151530394 151530695 -48099455 - AluSx SINE Alu -11 301 1 292 225 159 60 chr5 151530719 151530870 -48099280 + MER58C DNA MER1_type 50 215 0 1712 207 90 25 chr5 151530870 151531187 -48098963 - MLT1H1 LTR MaLR -28 502 142 1877 112 3 49 chr5 151531187 151531491 -48098659 + AluSx SINE Alu 3 292 -20 1712 207 90 25 chr5 151531491 151531634 -48098516 - MLT1H1 LTR MaLR -388 142 10 264 247 104 13 chr5 151531639 151531716 -48098434 + L2 LINE L2 3188 3271 -1 252 344 11 0 chr5 151531879 151531972 -48098178 + MIR SINE MIR 112 205 -57 2177 91 10 3 chr5 151532853 151533151 -48096999 + AluSq SINE Alu 1 300 -13 681 252 98 47 chr5 151533151 151533385 -48096765 - MIR SINE MIR -5 257 12 2321 144 78 0 chr5 151533824 151534221 -48095929 - MSTA LTR MaLR 0 428 1 2295 100 3 0 chr5 151534769 151535079 -48095071 - AluSp SINE Alu -2 311 1 2097 236 128 6 chr5 151535323 151535853 -48094297 + MLT1G1 LTR MaLR 1 595 0 2334 77 0 0 chr5 151536656 151536953 -48093197 - AluSp SINE Alu -16 297 1 678 184 191 6 chr5 151536954 151537122 -48093028 + MER3 DNA MER1_type 11 209 0 188 265 96 24 chr5 151537148 151537231 -48092919 + MIR SINE MIR 124 212 -50 1485 134 19 50 chr5 151537271 151537533 -48092617 - AluJb SINE Alu -58 254 1 360 291 139 13 chr5 151537557 151537708 -48092442 + L2 LINE L2 3102 3271 -1 2095 107 0 7 chr5 151538228 151538526 -48091624 - AluSx SINE Alu -16 296 1 1191 214 110 27 chr5 151538797 151539045 -48091105 - MLT1A1 LTR MaLR 0 365 80 2268 96 0 0 chr5 151539045 151539347 -48090803 - AluSc SINE Alu -7 302 1 1191 214 110 27 chr5 151539347 151539435 -48090715 - MLT1A1 LTR MaLR -285 80 1 588 283 76 20 chr5 151540271 151540469 -48089681 + MIR SINE MIR 11 219 -43 1022 148 23 42 chr5 151540509 151540726 -48089424 + AluJo SINE Alu 79 291 -21 2184 92 0 13 chr5 151540744 151541050 -48089100 - AluSx SINE Alu -10 302 1 23 0 0 0 chr5 151541434 151541457 -48088693 + GC_rich Low_complexity Low_complexity 1 23 0 2206 98 3 0 chr5 151542597 151542902 -48087248 - AluSp SINE Alu -6 307 2 245 315 27 27 chr5 151543574 151543685 -48086465 + MARNA DNA Mariner 138 248 -338 1574 177 0 24 chr5 151543695 151543989 -48086161 - AluJo SINE Alu -25 287 1 464 276 135 32 chr5 151544105 151544205 -48085945 + MIR SINE MIR 49 137 -125 2275 50 4 0 chr5 151544205 151544514 -48085636 + AluY SINE Alu 1 310 0 464 276 135 32 chr5 151544514 151544597 -48085553 + MIR SINE MIR 137 252 -10 352 179 0 64 chr5 151544597 151544660 -48085490 + MARNA DNA Mariner 337 396 -190 2276 70 3 17 chr5 151544660 151544961 -48085189 + AluSx SINE Alu 1 297 -15 352 179 0 64 chr5 151544961 151544975 -48085175 + MARNA DNA Mariner 396 409 -177 582 198 18 0 chr5 151546054 151546165 -48083985 + MER81 DNA DNA 2 114 0 1008 137 68 73 chr5 151546243 151546317 -48083833 - MER106A DNA MER1_type -3 233 160 1804 140 0 14 chr5 151546317 151546610 -48083540 - AluSx SINE Alu -23 289 1 1008 137 68 73 chr5 151546610 151546769 -48083381 - MER106A DNA MER1_type -76 160 1 1863 142 6 10 chr5 151546866 151547177 -48082973 - AluJo SINE Alu -2 310 1 872 150 0 0 chr5 151547652 151547779 -48082371 - FLAM_A SINE Alu -2 131 5 2302 92 0 0 chr5 151547794 151548097 -48082053 - AluSg SINE Alu -7 303 1 1516 176 10 40 chr5 151548098 151548394 -48081756 - AluJo SINE Alu -25 287 1 1904 132 34 0 chr5 151548646 151548942 -48081208 - AluSx SINE Alu -6 306 1 224 182 0 23 chr5 151549212 151549256 -48080894 - MIR SINE MIR -64 144 102 181 369 76 20 chr5 151549367 151549565 -48080585 - L3b LINE CR1 -76 1507 1299 429 262 110 16 chr5 151549717 151549908 -48080242 + MIR SINE MIR 4 212 -50 3386 112 46 31 chr5 151549927 151550047 -48080103 - MER1A DNA MER1_type -2173 527 410 1871 140 7 0 chr5 151550047 151550333 -48079817 - AluSx SINE Alu -6 306 19 3386 112 46 31 chr5 151550333 151550731 -48079419 - MER1A DNA MER1_type -2290 410 1 2170 145 132 5 chr5 151551742 151552122 -48078028 - MSTA LTR MaLR 0 428 1 2162 101 0 3 chr5 151552358 151552655 -48077495 - AluSg SINE Alu -14 296 1 413 316 94 39 chr5 151552921 151553155 -48076995 + L2 LINE L2 3018 3264 -8 271 292 58 0 chr5 151553222 151553342 -48076808 - MER102a DNA MER1_type -1 329 203 3461 157 27 5 chr5 151554312 151554904 -48075246 - MER6A DNA MER2_type 0 605 1 1634 164 19 16 chr5 151555190 151555501 -48074649 - AluJo SINE Alu 0 312 1 350 286 30 59 chr5 151555504 151555641 -48074509 - MIR SINE MIR -56 152 19 1955 119 34 3 chr5 151556108 151556401 -48073749 - AluSx SINE Alu -10 302 1 1749 169 3 3 chr5 151556983 151557290 -48072860 + AluSx SINE Alu 1 307 -5 1339 176 129 0 chr5 151557306 151557562 -48072588 + AluJb SINE Alu 3 291 -11 2129 123 0 0 chr5 151557798 151558099 -48072051 + AluSg SINE Alu 1 301 -9 1770 97 89 7 chr5 151558106 151558375 -48071775 - AluSx SINE Alu -21 291 1 902 116 31 0 chr5 151558674 151558803 -48071347 + AluSq/x SINE Alu 1 133 -179 2369 90 3 0 chr5 151558804 151559115 -48071035 + AluSx SINE Alu 1 312 0 205 250 163 11 chr5 151559185 151559277 -48070873 + MIR SINE MIR 51 156 -106 184 286 249 16 chr5 151559421 151559606 -48070544 + L2 LINE L2 2731 2958 -356 2293 89 0 16 chr5 151560092 151560406 -48069744 + AluSc SINE Alu 1 309 0 246 317 141 21 chr5 151560422 151560564 -48069586 - L2 LINE L2 -173 3099 2941 229 140 0 20 chr5 151560643 151560693 -48069457 - Alu SINE Alu 0 301 253 936 238 13 30 chr5 151560825 151561185 -48068965 + L2 LINE L2 2703 3056 -257 1738 146 0 15 chr5 151561217 151561485 -48068665 + AluJb SINE Alu 1 264 -48 864 181 36 0 chr5 151561541 151561707 -48068443 + MLT1F LTR MaLR 12 183 -384 2283 136 27 36 chr5 151561707 151561960 -48068190 + L1MD3 LINE L1 7578 7827 -168 2170 112 0 0 chr5 151561960 151562263 -48067887 - AluSg SINE Alu -7 303 1 2283 136 27 36 chr5 151562263 151562421 -48067729 + L1MD3 LINE L1 7827 7985 -10 996 178 163 10 chr5 151562425 151562627 -48067523 + MLT1F LTR MaLR 154 386 -156 1278 115 0 0 chr5 151562627 151562809 -48067341 - AluSc SINE Alu -9 300 119 41 36 0 0 chr5 151563015 151563070 -48067080 + AT_rich Low_complexity Low_complexity 1 55 0 1270 99 0 0 chr5 151564179 151564351 -48065799 - AluSg/x SINE Alu -12 298 127 2340 63 0 22 chr5 151564355 151564672 -48065478 - AluY SINE Alu -1 310 1 518 117 0 0 chr5 151564679 151564756 -48065394 + MER9 LTR ERVK 435 511 0 246 151 0 75 chr5 151564756 151564809 -48065341 - MLT1L LTR MaLR -560 55 7 2210 88 3 10 chr5 151564811 151565117 -48065033 + AluY SINE Alu 1 304 -7 368 283 123 0 chr5 151565133 151565271 -48064879 + L2 LINE L2 1867 2021 -1293 1442 149 0 0 chr5 151565475 151565696 -48064454 - AluSx SINE Alu -91 221 1 339 25 0 0 chr5 151565782 151565822 -48064328 + (ATG)n Simple_repeat Simple_repeat 2 41 0 1748 128 40 4 chr5 151565827 151566101 -48064049 - AluJo SINE Alu -26 286 3 575 292 40 45 chr5 151566101 151566303 -48063847 - MIR3 SINE MIR -5 203 3 441 266 141 17 chr5 151566415 151566592 -48063558 - L2 LINE L2 -13 3300 3102 1450 164 98 7 chr5 151566602 151566888 -48063262 + AluJb SINE Alu 1 312 0 703 134 8 60 chr5 151566889 151567023 -48063127 - MLT1F1 LTR MaLR -37 530 404 2289 61 0 7 chr5 151567024 151567317 -48062833 + AluY SINE Alu 1 291 -20 2348 82 0 22 chr5 151567326 151567644 -48062506 + AluSp SINE Alu 1 311 -2 1889 147 0 10 chr5 151568085 151568398 -48061752 - AluJb SINE Alu 0 312 3 1908 136 24 0 chr5 151568436 151568559 -48061591 + AluSx SINE Alu 1 120 -192 207 0 0 0 chr5 151568559 151568582 -48061568 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1908 136 24 0 chr5 151568582 151568753 -48061397 + AluSx SINE Alu 120 302 -10 342 326 54 16 chr5 151568773 151568902 -48061248 - L2 LINE L2 -2 3270 3137 348 300 17 8 chr5 151568947 151569067 -48061083 - MIR SINE MIR -19 243 123 2147 107 0 3 chr5 151569207 151569505 -48060645 + AluSx SINE Alu 1 297 -15 1208 164 20 24 chr5 151569672 151569964 -48060186 - AluY SINE Alu -20 291 1 971 91 23 0 chr5 151569964 151570096 -48060054 - AluY SINE Alu -176 135 1 395 254 43 65 chr5 151570407 151570545 -48059605 + MIR SINE MIR 19 153 -55 1690 174 3 0 chr5 151570944 151571237 -48058913 - AluJo SINE Alu -16 296 3 2108 115 0 10 chr5 151571793 151572098 -48058052 - AluSg SINE Alu -8 302 1 1118 120 12 0 chr5 151572334 151572501 -48057649 - AluSg/x SINE Alu -10 302 134 2170 112 0 13 chr5 151572501 151572814 -48057336 - AluSx SINE Alu -3 309 1 433 0 17 17 chr5 151572822 151572880 -48057270 + (TTTA)n Simple_repeat Simple_repeat 1 58 0 2098 84 7 0 chr5 151572883 151573158 -48056992 - AluSp SINE Alu -36 277 1 413 279 122 7 chr5 151573797 151573944 -48056206 + MER5B DNA MER1_type 1 164 -14 1484 163 83 18 chr5 151574307 151574583 -48055567 - AluJb SINE Alu -18 294 1 1344 141 0 0 chr5 151574765 151574963 -48055187 - AluSg/x SINE Alu -14 298 101 1106 164 15 5 chr5 151575064 151575259 -48054891 - AluJb SINE Alu -87 225 29 2004 116 3 3 chr5 151575338 151575640 -48054510 + AluSc SINE Alu 1 302 -7 22 56 0 0 chr5 151576180 151576216 -48053934 + AT_rich Low_complexity Low_complexity 1 36 0 1125 82 7 0 chr5 151576476 151576623 -48053527 + AluSq/x SINE Alu 1 148 -165 2122 104 0 7 chr5 151577116 151577414 -48052736 + AluSx SINE Alu 1 296 -16 242 261 29 29 chr5 151577489 151577558 -48052592 + MIR SINE MIR 28 96 -166 2120 119 0 3 chr5 151577623 151577933 -48052217 + AluSq SINE Alu 1 309 -4 502 188 16 7 chr5 151578203 151578389 -48051761 - MER46A DNA MER2_type -15 221 1 964 196 112 13 chr5 151578505 151578729 -48051421 + AluJo SINE Alu 44 289 -23 392 301 79 50 chr5 151579001 151579343 -48050807 - L1MC/D LINE L1 -2020 5788 5437 229 219 0 16 chr5 151579391 151579455 -48050695 - L1 LINE L1 -1089 5057 4995 254 233 188 57 chr5 151579618 151579764 -48050386 - L1MC4 LINE L1 -31 8011 7836 1986 118 0 0 chr5 151579764 151580071 -48050079 - AluSg SINE Alu 0 307 1 254 233 188 57 chr5 151580071 151580099 -48050051 - L1MC4 LINE L1 -206 7836 7813 1284 84 0 0 chr5 151580229 151580396 -48049754 - AluSq SINE Alu -13 300 134 2174 119 0 0 chr5 151580397 151580700 -48049450 - AluSc SINE Alu -6 303 1 1996 122 0 3 chr5 151580875 151581192 -48048958 + AluSc SINE Alu 1 309 0 2115 111 10 0 chr5 151581446 151581743 -48048407 + AluSq SINE Alu 1 300 -13 2274 93 3 10 chr5 151581765 151582078 -48048072 + AluY SINE Alu 1 311 0 3077 105 11 7 chr5 151582078 151582516 -48047634 - MER9 LTR ERVK -71 440 1 1136 286 16 44 chr5 151582584 151582724 -48047426 + MLT1L LTR MaLR 113 255 -360 2115 106 0 3 chr5 151582724 151583016 -48047134 - AluSx SINE Alu -11 301 11 1136 286 16 44 chr5 151583016 151583311 -48046839 + MLT1L LTR MaLR 255 598 -17 1658 142 7 40 chr5 151583459 151583755 -48046395 + AluJo SINE Alu 18 303 -9 215 346 0 0 chr5 151583794 151583846 -48046304 - MER5A DNA MER1_type -83 106 55 2157 109 0 7 chr5 151583885 151584188 -48045962 - AluY SINE Alu -10 301 1 214 191 118 44 chr5 151584257 151584325 -48045825 + L2 LINE L2 3235 3307 -6 2269 74 16 19 chr5 151584622 151584933 -48045217 + AluSg SINE Alu 1 310 0 350 280 85 69 chr5 151584936 151585125 -48045025 - L1ME4a LINE L1 -94 6027 5836 298 263 158 0 chr5 151585133 151585285 -48044865 - L1ME4a LINE L1 -383 5787 5612 2131 119 0 0 chr5 151585832 151586134 -48044016 - AluSg SINE Alu -8 302 1 413 316 94 39 chr5 151586400 151586634 -48043516 + L2 LINE L2 3018 3264 -8 271 292 58 0 chr5 151586701 151586821 -48043329 - MER102b DNA MER1_type -1 340 214 3461 157 27 5 chr5 151587791 151588383 -48041767 - MER6A DNA MER2_type 0 605 1 1634 164 19 16 chr5 151588669 151588980 -48041170 - AluJo SINE Alu 0 312 1 350 286 30 59 chr5 151588983 151589120 -48041030 - MIR SINE MIR -56 152 19 245 245 19 25 chr5 151590521 151590650 -48039500 + MIR SINE MIR 60 252 -10 432 273 20 0 chr5 151590914 151591013 -48039137 - L2 LINE L2 -3 3269 3169 2051 105 0 52 chr5 151592964 151593289 -48036861 - AluSp SINE Alu -5 308 1 1742 161 3 10 chr5 151593292 151593596 -48036554 - AluJo SINE Alu -10 302 1 254 257 200 34 chr5 151593597 151593772 -48036378 + MIR SINE MIR 49 252 -10 421 307 123 46 chr5 151594478 151594983 -48035167 - L2 LINE L2 0 3272 2738 411 244 6 131 chr5 151595716 151595779 -48034371 + MIR SINE MIR 9 78 -184 1988 113 0 0 chr5 151595779 151596053 -48034097 + AluSg SINE Alu 1 274 -36 243 0 0 0 chr5 151596053 151596080 -48034070 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2394 81 0 0 chr5 151596085 151596392 -48033758 + AluY SINE Alu 1 307 -4 411 244 6 131 chr5 151596392 151596489 -48033661 + MIR SINE MIR 81 155 -107 1930 154 70 9 chr5 151596489 151596833 -48033317 + MLT1A1 LTR MaLR 1 365 0 1883 139 81 3 chr5 151596833 151597156 -48032994 + MLT1A1-int LTR MaLR 1 348 -1387 862 199 0 0 chr5 151597160 151597311 -48032839 + FRAM SINE Alu 4 154 -12 2096 113 10 0 chr5 151597336 151597636 -48032514 - AluSx SINE Alu -9 303 1 1832 182 51 83 chr5 151597637 151597973 -48032177 - L1M4c LINE L1 -2443 3939 3594 2137 92 7 3 chr5 151597973 151598277 -48031873 - AluSq SINE Alu -8 305 1 1832 182 51 83 chr5 151598277 151598349 -48031801 - L1M4c LINE L1 -2788 3594 3521 2042 132 3 0 chr5 151598349 151598659 -48031491 - AluSx SINE Alu 0 312 2 626 192 108 0 chr5 151598661 151598781 -48031369 - FLAM_A SINE Alu 0 133 1 1832 182 51 83 chr5 151598781 151598824 -48031326 - L1M4c LINE L1 -2862 3520 3477 1534 174 69 0 chr5 151598824 151599099 -48031051 - AluJo SINE Alu -18 294 1 1832 182 51 83 chr5 151599099 151599245 -48030905 - L1M4c LINE L1 -2905 3477 3356 1183 154 150 0 chr5 151599373 151599593 -48030557 + AluJb SINE Alu 57 309 -3 527 189 111 20 chr5 151599594 151599747 -48030403 + LTR23 LTR ERV1 16 182 -255 1310 148 24 69 chr5 151599793 151600083 -48030067 + LTR23 LTR ERV1 161 437 0 683 161 17 0 chr5 151600083 151600201 -48029949 + L1MC3 LINE L1 7655 7774 -11 230 254 16 16 chr5 151600201 151600258 -48029892 + AluJ/FLAM SINE Alu 2 58 -244 926 112 56 14 chr5 151600258 151600401 -48029749 - MER61E LTR ERV1 0 569 421 2698 13 0 6 chr5 151600401 151600714 -48029436 + AluY SINE Alu 1 311 0 2187 98 0 10 chr5 151600720 151601025 -48029125 + AluSq SINE Alu 1 302 -11 3116 203 53 33 chr5 151601026 151601066 -48029084 + L1M4c LINE L1 1032 1070 -5314 2034 112 3 26 chr5 151601066 151601369 -48028781 + AluSg SINE Alu 1 296 -14 3116 203 53 33 chr5 151601369 151602170 -48027980 + L1M4c LINE L1 1070 1991 -4393 2124 102 0 10 chr5 151602170 151602473 -48027677 + AluSq SINE Alu 1 300 -13 3116 203 53 33 chr5 151602473 151602549 -48027601 + L1M4c LINE L1 1991 2064 -4320 340 265 10 0 chr5 151602628 151602726 -48027424 + L1M4c LINE L1 2106 2204 -4180 715 75 104 19 chr5 151603070 151603176 -48026974 - AluSp/q SINE Alu -16 297 183 964 83 0 8 chr5 151603290 151603423 -48026727 - AluY SINE Alu -179 132 1 342 181 12 24 chr5 151603423 151603506 -48026644 - L1M4c LINE L1 -3102 3280 3199 1988 140 3 0 chr5 151603511 151603819 -48026331 - AluSx SINE Alu -3 309 1 1684 102 18 18 chr5 151603819 151604102 -48026048 - L1M4c LINE L1 -4151 2233 1951 4640 125 40 99 chr5 151604342 151604440 -48025710 - L1M4c LINE L1 -4828 1556 1454 2022 118 3 3 chr5 151604440 151604736 -48025414 - AluSg SINE Alu -14 296 1 4640 125 40 99 chr5 151604736 151605370 -48024780 - L1M4c LINE L1 -4930 1454 785 6396 65 2 40 chr5 151605370 151607262 -48022888 - SVA Other Other -1069 1386 1 4640 125 40 99 chr5 151607262 151607308 -48022842 - L1M4c LINE L1 -5599 785 738 2216 89 0 20 chr5 151607308 151607612 -48022538 + AluSg SINE Alu 1 298 -12 4640 125 40 99 chr5 151607612 151607623 -48022527 - L1M4c LINE L1 -5646 738 728 213 39 0 0 chr5 151607623 151607649 -48022501 + (CA)n Simple_repeat Simple_repeat 2 27 0 4640 125 40 99 chr5 151607649 151607915 -48022235 - L1M4c LINE L1 -5656 728 555 781 243 0 0 chr5 151607922 151608074 -48022076 - FAM SINE Alu -18 167 16 1515 176 54 0 chr5 151608114 151608393 -48021757 - AluJb SINE Alu -13 299 6 2349 141 79 25 chr5 151608393 151608818 -48021332 - L1M4c LINE L1 -5821 563 113 4020 101 60 156 chr5 151608818 151609117 -48021033 - Tigger3(Golem) DNA MER2_type 0 3029 2703 751 164 0 8 chr5 151609117 151609245 -48020905 + FLAM_A SINE Alu 10 136 -6 4020 101 60 156 chr5 151609245 151609788 -48020362 - Tigger3(Golem) DNA MER2_type -326 2703 2153 910 147 5 88 chr5 151609829 151609977 -48020173 + AluJb SINE Alu 1 129 -183 2327 70 0 13 chr5 151609977 151610276 -48019874 + AluY SINE Alu 1 295 -16 910 147 5 88 chr5 151610276 151610331 -48019819 + AluJb SINE Alu 129 187 -125 587 218 0 9 chr5 151610435 151610545 -48019605 + AluJb SINE Alu 190 298 -14 1453 194 19 0 chr5 151610553 151610811 -48019339 - AluJo SINE Alu -49 263 1 286 158 0 0 chr5 151610821 151610878 -48019272 - Tigger3(Golem) DNA MER2_type -2699 330 274 * 610 147 63 0 chr5 151610876 151610971 -48019179 - Tigger3(Golem) DNA MER2_type -2927 102 2 596 120 37 46 chr5 151610976 151611037 -48019113 - L1M4c LINE L1 -6273 111 51 5459 60 26 46 chr5 151611037 151611228 -48018922 - MER4E LTR ERV1 0 766 573 1937 133 0 22 chr5 151611228 151611544 -48018606 + AluSc SINE Alu 1 309 0 5459 60 26 46 chr5 151611544 151611561 -48018589 - MER4E LTR ERV1 -193 573 557 1995 115 0 3 chr5 151611561 151611847 -48018303 + AluSq SINE Alu 21 305 -8 5459 60 26 46 chr5 151611847 151612419 -48017731 - MER4E LTR ERV1 -209 557 1 596 120 37 46 chr5 151612419 151612465 -48017685 - L1M4c LINE L1 -6333 51 5 422 237 153 8 chr5 151612484 151612615 -48017535 + MIR SINE MIR 112 261 -1 423 259 0 58 chr5 151612916 151613055 -48017095 + MIR SINE MIR 24 154 -108 1857 114 18 4 chr5 151613057 151613337 -48016813 - AluSq SINE Alu -13 300 17 273 93 222 0 chr5 151613393 151613447 -48016703 - MADE1 DNA Mariner -14 66 1 1212 129 0 15 chr5 151613570 151613771 -48016379 + AluSg/x SINE Alu 113 310 -2 757 296 168 32 chr5 151613889 151614433 -48015717 + L2 LINE L2 2715 3311 -2 1821 150 14 0 chr5 151615100 151615393 -48014757 - AluJb SINE Alu -15 297 1 2205 88 3 3 chr5 151615873 151616167 -48013983 - AluSp SINE Alu -19 294 1 1837 127 32 0 chr5 151616289 151616572 -48013578 - AluSx SINE Alu -20 292 1 191 331 15 98 chr5 151616706 151616839 -48013311 - L3b LINE CR1 -327 1256 1135 396 0 0 0 chr5 151616941 151616985 -48013165 + (TG)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr5 151618304 151618325 -48011825 + AT_rich Low_complexity Low_complexity 1 21 0 706 263 23 0 chr5 151618818 151618993 -48011157 + MIR SINE MIR 2 180 -82 813 205 13 0 chr5 151620137 151620288 -48009862 - MLT1D LTR MaLR 0 505 353 348 337 30 12 chr5 151620395 151620561 -48009589 + MIR SINE MIR 66 234 -28 1537 99 9 9 chr5 151620674 151620896 -48009254 + AluSg/x SINE Alu 72 293 -19 1329 168 117 79 chr5 151621086 151621257 -48008893 + MLT1B LTR MaLR 8 171 -219 282 29 0 0 chr5 151621257 151621292 -48008858 + (TC)n Simple_repeat Simple_repeat 2 36 0 1329 168 117 79 chr5 151621292 151621489 -48008661 + MLT1B LTR MaLR 171 390 0 847 90 0 0 chr5 151622647 151622758 -48007392 - AluSq/x SINE Alu -202 111 1 229 246 164 0 chr5 151623745 151623806 -48006344 + L2 LINE L2 3201 3271 -1 460 106 0 0 chr5 151624287 151624376 -48005774 + AluJ/FRAM SINE Alu 223 311 0 1576 126 119 22 chr5 151624389 151624658 -48005492 - AluSx SINE Alu -11 301 7 1134 35 0 28 chr5 151624795 151624938 -48005212 - L1PA3 LINE L1 -1 6154 6016 2151 112 0 0 chr5 151624980 151625285 -48004865 + AluSx SINE Alu 1 305 -7 1708 139 31 7 chr5 151625445 151625732 -48004418 + AluSx SINE Alu 1 294 -18 1749 121 39 7 chr5 151625734 151626016 -48004134 + AluSc SINE Alu 1 291 -18 2149 89 14 0 chr5 151626018 151626310 -48003840 + AluSc SINE Alu 1 296 -13 2318 87 0 0 chr5 151626627 151626927 -48003223 + AluY SINE Alu 1 300 -11 511 166 131 21 chr5 151627181 151627215 -48002935 + MIR SINE MIR 1 30 -232 1965 77 36 15 chr5 151627215 151627523 -48002627 + AluY SINE Alu 1 314 0 511 166 131 21 chr5 151627523 151627632 -48002518 + MIR SINE MIR 30 161 -101 362 210 62 0 chr5 151627981 151628062 -48002088 - Charlie5 DNA MER1_type -2524 88 3 212 257 14 43 chr5 151628210 151628280 -48001870 + MIR SINE MIR 38 105 -103 677 229 161 9 chr5 151628287 151628510 -48001640 + MIR SINE MIR 1 257 -5 1827 60 11 37 chr5 151628576 151628844 -48001306 + AluSc SINE Alu 39 299 -10 185 218 146 18 chr5 151629859 151629914 -48000236 - MIR3 SINE MIR -4 204 143 2071 78 0 7 chr5 151631514 151631825 -47998325 - AluSc SINE Alu 0 309 1 1515 174 12 0 chr5 151632283 151632536 -47997614 - AluJb SINE Alu -25 287 32 2867 145 16 26 chr5 151632683 151633228 -47996922 - L1 LINE L1 -796 5350 4811 23 0 0 0 chr5 151633607 151633630 -47996520 + AT_rich Low_complexity Low_complexity 1 23 0 2087 112 3 0 chr5 151633634 151633928 -47996222 + AluSx SINE Alu 2 296 -16 296 227 127 82 chr5 151633984 151634094 -47996056 + L2 LINE L2 3181 3295 -18 2046 112 3 0 chr5 151634407 151634701 -47995449 + AluSx SINE Alu 1 295 -17 1680 148 16 16 chr5 151634999 151635309 -47994841 + AluJb SINE Alu 1 310 -2 2263 69 10 7 chr5 151635718 151636009 -47994141 - AluY SINE Alu -19 292 1 1067 112 0 0 chr5 151636009 151636152 -47993998 - AluSg SINE Alu -167 143 1 837 167 7 13 chr5 151636344 151636494 -47993656 + FRAM SINE Alu 2 150 -26 29 47 0 0 chr5 151636509 151636552 -47993598 + AT_rich Low_complexity Low_complexity 1 43 0 398 282 166 61 chr5 151636823 151637249 -47992901 + L2 LINE L2 1700 2080 -1234 1644 109 164 4 chr5 151637249 151637505 -47992645 - AluSx SINE Alu -5 297 1 1329 131 80 87 chr5 151637509 151637821 -47992329 - AluJb SINE Alu -2 310 1 398 282 166 61 chr5 151637821 151637931 -47992219 + L2 LINE L2 2082 2298 -1016 742 182 0 0 chr5 151638082 151638214 -47991936 + AluJb SINE Alu 175 306 -6 443 241 105 0 chr5 151638387 151638520 -47991630 + L2 LINE L2 3165 3311 -2 2205 89 0 3 chr5 151638616 151638909 -47991241 - AluSp SINE Alu -21 292 1 334 306 112 18 chr5 151638977 151639009 -47991141 + MIR SINE MIR 61 89 -173 1480 135 16 63 chr5 151639009 151639327 -47990823 - AluSx SINE Alu -4 308 6 334 306 112 18 chr5 151639327 151639464 -47990686 + MIR SINE MIR 89 246 -16 2112 51 0 14 chr5 151639762 151640038 -47990112 + AluY SINE Alu 35 306 -5 1316 161 15 33 chr5 151640043 151640316 -47989834 + AluJo SINE Alu 1 268 -44 180 111 0 0 chr5 151640846 151640873 -47989277 + (TCTCCC)n Simple_repeat Simple_repeat 6 32 0 264 247 155 21 chr5 151642769 151642866 -47987284 - MIR3 SINE MIR -36 172 63 1194 166 8 38 chr5 151642894 151643129 -47987021 - AluJb SINE Alu -18 294 67 29 60 0 0 chr5 151643229 151643279 -47986871 + AT_rich Low_complexity Low_complexity 1 50 0 1742 104 0 29 chr5 151643978 151644256 -47985894 + AluSx SINE Alu 21 290 -22 1721 138 24 7 chr5 151645360 151645657 -47984493 + AluSx SINE Alu 1 302 -10 251 196 112 47 chr5 151645885 151645992 -47984158 + L1MC/D LINE L1 5703 5816 -1992 1322 202 61 4 chr5 151646462 151646739 -47983411 + AluJo SINE Alu 1 293 -19 727 165 0 0 chr5 151646923 151647032 -47983118 + 5S rRNA rRNA 2 110 -11 1891 118 0 7 chr5 151647165 151647445 -47982705 + AluSg SINE Alu 13 290 -20 435 246 8 15 chr5 151648061 151648191 -47981959 - AluJb SINE Alu -182 130 2 591 220 34 25 chr5 151649078 151649196 -47980954 - L2 LINE L2 0 3272 3154 636 240 80 23 chr5 151649491 151649666 -47980484 + MIR SINE MIR 21 205 -57 263 114 0 0 chr5 151649755 151649790 -47980360 + FLAM SINE Alu 84 118 -15 209 125 0 42 chr5 151649796 151649844 -47980306 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 270 354 47 0 chr5 151650004 151650131 -47980019 + L3b LINE CR1 1321 1453 -130 2357 63 0 0 chr5 151650364 151650665 -47979485 + AluY SINE Alu 1 301 -10 207 100 0 0 chr5 151650754 151650784 -47979366 + (A)n Simple_repeat Simple_repeat 1 30 0 2109 102 3 0 chr5 151650945 151651256 -47978894 - AluSp SINE Alu 0 312 1 306 312 24 16 chr5 151651297 151651422 -47978728 + CT-rich Low_complexity Low_complexity 1 126 0 2035 118 0 20 chr5 151651516 151651820 -47978330 + AluSx SINE Alu 1 298 -14 310 252 10 39 chr5 151651919 151652022 -47978128 + MER103 DNA DNA 59 158 -8 495 291 28 60 chr5 151652063 151652269 -47977881 - MIR SINE MIR -11 251 48 1913 125 7 0 chr5 151652269 151652566 -47977584 - AluSx SINE Alu -13 299 1 495 291 28 60 chr5 151652566 151652603 -47977547 - MIR SINE MIR -214 48 11 967 257 102 62 chr5 151652714 151653184 -47976966 - L2 LINE L2 -7 3306 2818 2228 202 85 30 chr5 151653273 151653779 -47976371 - MLT1F LTR MaLR -8 534 1 197 62 0 31 chr5 151654064 151654096 -47976054 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 214 339 0 0 chr5 151655051 151655113 -47975037 + CT-rich Low_complexity Low_complexity 4 65 0 461 215 159 0 chr5 151655502 151655609 -47974541 + L2 LINE L2 3188 3311 -2 2187 74 0 24 chr5 151655665 151655961 -47974189 + AluSc SINE Alu 1 289 -20 391 293 93 94 chr5 151656124 151656459 -47973691 - L2 LINE L2 0 3272 2938 2219 88 0 23 chr5 151656459 151656764 -47973386 + AluSq SINE Alu 1 298 -15 391 293 93 94 chr5 151656764 151656988 -47973162 - L2 LINE L2 -334 2938 2776 1558 184 7 17 chr5 151656988 151657281 -47972869 + AluJo SINE Alu 1 290 -22 391 293 93 94 chr5 151657281 151657536 -47972614 - L2 LINE L2 -496 2776 2522 2072 125 0 7 chr5 151658005 151658294 -47971856 + AluSx SINE Alu 1 287 -25 2216 99 7 7 chr5 151658317 151658620 -47971530 + AluSq SINE Alu 1 303 -10 2679 181 87 32 chr5 151658620 151658749 -47971401 - L1M4 LINE L1 -5368 1174 1054 2265 103 0 22 chr5 151658749 151659060 -47971090 + AluSx SINE Alu 1 304 -8 2679 181 87 32 chr5 151659060 151659560 -47970590 - L1M4 LINE L1 -5488 1054 510 2227 96 0 3 chr5 151659702 151659995 -47970155 + AluSc SINE Alu 1 292 -17 356 248 73 18 chr5 151660030 151660139 -47970011 - L1M4 LINE L1 -6275 267 153 441 162 71 20 chr5 151660186 151660285 -47969865 - FLAM_C SINE Alu -10 133 30 501 298 90 11 chr5 151660292 151660470 -47969680 + MIR SINE MIR 24 215 -47 2549 158 79 12 chr5 151660635 151661134 -47969016 + L1MB7 LINE L1 5597 6137 -47 954 157 13 13 chr5 151661134 151661293 -47968857 - AluJb SINE Alu -20 292 134 2016 112 0 17 chr5 151661297 151661591 -47968559 - AluSx SINE Alu -23 289 1 1359 191 60 57 chr5 151661910 151662209 -47967941 - AluJo SINE Alu -11 301 2 1650 147 37 23 chr5 151662261 151662560 -47967590 - AluSx SINE Alu -9 303 1 1437 200 17 10 chr5 151662570 151662860 -47967290 - AluJo SINE Alu -20 292 1 504 33 0 17 chr5 151663109 151663169 -47966981 + AluY SINE Alu 86 144 -167 2692 39 0 0 chr5 151663395 151663700 -47966450 - AluY SINE Alu -2 309 5 2124 89 78 0 chr5 151663712 151663993 -47966157 - AluY SINE Alu -8 303 1 924 128 0 40 chr5 151664001 151664149 -47966001 - FLAM_C SINE Alu -1 142 1 3709 149 43 34 chr5 151664176 151664467 -47965683 - L1MB7 LINE L1 -10 6174 5887 2401 82 0 3 chr5 151664467 151664772 -47965378 - AluY SINE Alu -7 304 1 3709 149 43 34 chr5 151664772 151664828 -47965322 - L1MB7 LINE L1 -297 5887 5833 2198 113 3 3 chr5 151664828 151665130 -47965020 - AluSx SINE Alu -10 302 1 1829 143 7 18 chr5 151665132 151665418 -47964732 - AluJo SINE Alu -8 304 22 3709 149 43 34 chr5 151665418 151665737 -47964413 - L1MB7 LINE L1 -351 5833 5498 440 293 57 0 chr5 151665968 151666091 -47964059 + L2 LINE L2 3141 3270 -2 396 88 0 0 chr5 151666797 151666854 -47963296 + (CA)n Simple_repeat Simple_repeat 1 57 0 1004 113 54 16 chr5 151668156 151668333 -47961817 - L1MA7 LINE L1 0 6291 6105 1695 168 18 11 chr5 151668333 151668619 -47961531 + AluJo SINE Alu 1 288 -24 375 202 106 29 chr5 151668899 151669003 -47961147 + L2 LINE L2 3197 3308 -5 1924 114 0 18 chr5 151669619 151669891 -47960259 - AluSg SINE Alu -22 288 22 2336 91 7 0 chr5 151669891 151670187 -47959963 - AluSg SINE Alu -12 298 1 321 217 12 36 chr5 151670321 151670404 -47959746 - MER3 DNA MER1_type -128 81 1 1234 198 132 7 chr5 151670412 151670715 -47959435 - MER58B DNA MER1_type 0 341 1 1216 166 26 105 chr5 151671408 151671721 -47958429 - AluJb SINE Alu -14 288 1 2066 101 46 33 chr5 151671730 151672037 -47958113 - AluSx SINE Alu -1 311 1 1822 123 83 3 chr5 151672906 151673207 -47956943 - L1MC3 LINE L1 -16 7769 7445 1131 103 23 29 chr5 151673207 151673381 -47956769 - AluSg/x SINE Alu -4 308 136 223 213 106 0 chr5 151674064 151674111 -47956039 - L2 LINE L2 -49 3223 3172 1864 123 44 20 chr5 151674716 151675009 -47955141 + AluSx SINE Alu 1 300 -12 1079 140 0 0 chr5 151675920 151676070 -47954080 + AluSp SINE Alu 145 294 -19 1253 179 196 1 chr5 151676070 151676475 -47953675 + L1M2c LINE L1 1791 2198 -4521 782 150 26 0 chr5 151676747 151676860 -47953290 - FLAM_C SINE Alu -25 118 3 22 0 0 0 chr5 151676862 151676884 -47953266 + AT_rich Low_complexity Low_complexity 1 22 0 275 314 0 34 chr5 151676957 151677075 -47953075 + AluSq/x SINE Alu 10 123 -179 241 167 0 186 chr5 151677195 151677297 -47952853 + AluSp/q SINE Alu 200 282 -21 2134 105 31 7 chr5 151677772 151678066 -47952084 + AluSp SINE Alu 1 301 -12 27 29 0 0 chr5 151680910 151680944 -47949206 + AT_rich Low_complexity Low_complexity 1 34 0 2301 90 16 13 chr5 151684333 151684644 -47945506 - AluSp SINE Alu -1 312 1 2284 105 3 6 chr5 151685303 151685616 -47944534 - AluSx SINE Alu 0 312 1 429 203 19 11 chr5 151685668 151685945 -47944205 - AluJb SINE Alu 0 314 1 2146 121 16 0 chr5 151686193 151686499 -47943651 - AluSq SINE Alu -2 311 1 180 0 0 0 chr5 151686573 151686593 -47943557 + (T)n Simple_repeat Simple_repeat 1 20 0 344 214 0 34 chr5 151686887 151686976 -47943174 - MIR SINE MIR -14 248 163 2059 146 13 0 chr5 151687456 151687764 -47942386 - AluSx SINE Alu 0 312 1 2120 134 3 0 chr5 151689787 151690092 -47940058 - AluSq SINE Alu -7 306 1 1696 176 17 10 chr5 151690097 151690393 -47939757 - AluSx SINE Alu -14 298 1 2284 96 0 19 chr5 151691667 151691981 -47938169 - AluSx SINE Alu -4 308 1 1829 134 29 26 chr5 151691985 151692292 -47937858 - AluSc SINE Alu -1 308 1 825 140 7 15 chr5 151692667 151692803 -47937347 + AluJo SINE Alu 1 135 -177 1941 118 24 10 chr5 151693114 151693403 -47936747 + AluSx SINE Alu 1 293 -19 252 0 0 0 chr5 151693408 151693436 -47936714 + (T)n Simple_repeat Simple_repeat 1 28 0 186 103 0 0 chr5 151693481 151693510 -47936640 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2203 92 3 3 chr5 151693574 151693866 -47936284 + AluY SINE Alu 1 292 -19 1219 215 60 32 chr5 151693876 151694160 -47935990 + AluJo SINE Alu 1 292 -10 2090 77 22 48 chr5 151694291 151694602 -47935548 - AluY SINE Alu -8 303 1 1896 155 0 13 chr5 151694692 151695001 -47935149 - AluSx SINE Alu -7 305 1 1712 179 3 3 chr5 151695048 151695344 -47934806 + AluJo SINE Alu 1 296 -16 1837 116 69 4 chr5 151697176 151697451 -47932699 + AluSx SINE Alu 4 296 -16 534 293 120 5 chr5 151697622 151697830 -47932320 - MIR SINE MIR 0 262 31 2140 112 10 10 chr5 151697838 151698141 -47932009 - AluSx SINE Alu -9 303 1 2497 41 0 7 chr5 151698457 151698751 -47931399 + AluY SINE Alu 1 292 -19 2288 109 6 13 chr5 151699959 151700272 -47929878 - AluSq SINE Alu -2 311 1 23 0 0 0 chr5 151700485 151700508 -47929642 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 151700852 151700873 -47929277 + AT_rich Low_complexity Low_complexity 1 21 0 2086 117 10 3 chr5 151700970 151701268 -47928882 - AluSp SINE Alu -13 300 1 2250 108 3 3 chr5 151701403 151701709 -47928441 - AluSq SINE Alu -7 306 1 23 0 0 0 chr5 151701719 151701742 -47928408 + AT_rich Low_complexity Low_complexity 1 23 0 680 222 111 30 chr5 151702040 151702238 -47927912 + MER58A DNA MER1_type 1 214 -10 2104 119 3 10 chr5 151702267 151702570 -47927580 + AluSq SINE Alu 1 301 -12 1671 189 24 0 chr5 151704347 151704638 -47925512 - AluJb SINE Alu -14 298 1 1359 152 186 4 chr5 151705416 151705679 -47924471 - AluSx SINE Alu -1 311 1 2243 83 7 0 chr5 151706255 151706543 -47923607 + AluY SINE Alu 1 290 -21 384 278 96 0 chr5 151706545 151706660 -47923490 - MER5A DNA MER1_type -5 184 59 265 220 34 0 chr5 151706664 151706723 -47923427 - 7SK RNA RNA -10 183 123 386 183 0 0 chr5 151706770 151706841 -47923309 - 7SK RNA RNA -71 122 52 715 85 136 0 chr5 151706841 151706959 -47923191 - AluSq/x SINE Alu -177 135 2 257 246 98 0 chr5 151706962 151707023 -47923127 - MER5A DNA MER1_type -117 72 6 1514 134 191 0 chr5 151707636 151707882 -47922268 - AluSq SINE Alu -6 297 5 1733 172 10 13 chr5 151707948 151708251 -47921899 - AluJb SINE Alu -10 302 1 2108 100 0 7 chr5 151708292 151708581 -47921569 + AluSg SINE Alu 7 293 -17 2373 97 0 0 chr5 151910672 151910970 -47719180 + AluSg SINE Alu 1 298 -12 1332 118 0 15 chr5 151911748 151911943 -47718207 + AluSg/x SINE Alu 119 310 0 935 224 6 0 chr5 151911947 151912112 -47718038 - FAM SINE Alu -9 166 1 358 164 58 115 chr5 151912113 151912217 -47717933 - L1M4 LINE L1 -822 5324 5227 1265 158 14 31 chr5 151912217 151912233 -47717917 - AluJo SINE Alu 0 312 297 2138 131 3 13 chr5 151912233 151912547 -47717603 - AluSx SINE Alu 0 312 2 1265 158 14 31 chr5 151912547 151912752 -47717398 - AluJo SINE Alu -15 297 95 1607 209 9 64 chr5 151912754 151912830 -47717320 - L1M4 LINE L1 -941 5205 5126 2147 109 3 0 chr5 151912830 151913138 -47717012 - AluSp SINE Alu 0 309 1 1607 209 9 64 chr5 151913138 151913433 -47716717 - L1M4 LINE L1 -1020 5126 4858 2182 128 3 0 chr5 151913433 151913731 -47716419 + AluSx SINE Alu 1 299 -13 1607 209 9 64 chr5 151913731 151913797 -47716353 - L1M4 LINE L1 -1288 4858 4790 1973 148 20 0 chr5 151913797 151914095 -47716055 - AluSx SINE Alu -8 304 1 1424 185 142 0 chr5 151914095 151914355 -47715795 - AluJb SINE Alu -5 297 1 920 114 43 29 chr5 151914403 151914577 -47715573 - AluSg/x SINE Alu 0 310 151 1762 133 82 34 chr5 151914581 151914720 -47715430 + AluSx SINE Alu 1 132 -180 2257 111 3 0 chr5 151914720 151915017 -47715133 + AluSp SINE Alu 3 300 -13 1762 133 82 34 chr5 151915017 151915170 -47714980 + AluSx SINE Alu 132 307 -5 798 143 23 23 chr5 151915177 151915310 -47714840 + FLAM_C SINE Alu 1 133 0 1574 199 17 19 chr5 151915310 151915727 -47714423 + MLT1F LTR MaLR 21 492 -50 319 302 81 68 chr5 151915783 151915946 -47714204 + L3 LINE CR1 792 951 -626 2260 120 3 0 chr5 151915946 151916247 -47713903 + AluSp SINE Alu 1 302 -11 2278 122 0 0 chr5 151916256 151916550 -47713600 + AluSx SINE Alu 1 294 -18 319 302 81 68 chr5 151916550 151916611 -47713539 + L3 LINE CR1 958 1029 -548 4873 63 118 124 chr5 151916711 151917542 -47712608 + LTR12 LTR ERV1 1 826 0 46553 83 7 11 chr5 151917555 151924003 -47706147 + HERV9 LTR ERV1 40 6456 -1943 7389 82 5 12 chr5 151924003 151925031 -47705119 + HERV9 LTR ERV1 7375 8395 -4 4776 66 111 123 chr5 151925035 151925145 -47705005 + LTR12 LTR ERV1 1 111 -715 2410 90 0 0 chr5 151925145 151925446 -47704704 - AluY SINE Alu -10 301 1 4776 66 111 123 chr5 151925446 151926171 -47703979 + LTR12 LTR ERV1 111 826 0 189 221 97 78 chr5 151926256 151926410 -47703740 + L2 LINE L2 199 355 -2959 352 284 106 21 chr5 151926519 151926660 -47703490 + L2 LINE L2 3160 3312 -1 186 189 0 0 chr5 151926660 151926697 -47703453 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 394 309 181 27 chr5 151926717 151926976 -47703174 + L3 LINE CR1 1250 1548 -29 2236 117 0 16 chr5 151927068 151927385 -47702765 - AluSx SINE Alu 0 312 1 225 227 216 11 chr5 151927513 151927601 -47702549 + L2 LINE L2 3167 3272 0 242 227 30 0 chr5 151927920 151927986 -47702164 - MIR SINE MIR -63 145 78 364 228 272 0 chr5 151928269 151928383 -47701767 + MIR SINE MIR 103 247 -15 2129 130 3 7 chr5 151928396 151928696 -47701454 + AluSx SINE Alu 1 299 -13 2396 77 0 26 chr5 151928697 151929009 -47701141 + AluSx SINE Alu 2 305 -7 203 138 0 0 chr5 151929018 151929047 -47701103 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 1728 56 5 23 chr5 151929049 151929263 -47700887 + AluSp SINE Alu 1 210 -103 2361 107 0 3 chr5 151929649 151929958 -47700192 + AluSq SINE Alu 1 308 -5 446 204 152 8 chr5 151930283 151930415 -47699735 - L2 LINE L2 0 3313 3163 2076 83 0 11 chr5 151930598 151930892 -47699258 - AluSq SINE Alu 0 313 23 258 294 101 18 chr5 151930938 151931047 -47699103 + MER5A DNA MER1_type 50 167 -22 * 400 260 10 19 chr5 151930960 151931064 -47699086 - MER5A DNA MER1_type -70 119 17 737 66 0 0 chr5 151931221 151931353 -47698797 + AluSg/x SINE Alu 189 320 0 244 312 119 0 chr5 151932229 151932338 -47697812 + MIR SINE MIR 70 191 -71 183 42 0 0 chr5 151932382 151932406 -47697744 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1386 177 39 12 chr5 151932423 151932677 -47697473 - AluJo SINE Alu -51 261 1 2393 92 0 3 chr5 151933014 151933317 -47696833 - AluSc SINE Alu -7 302 1 1573 142 83 12 chr5 151933528 151933781 -47696369 + AluJo SINE Alu 6 276 -36 2438 80 0 13 chr5 151933813 151934126 -47696024 + AluY SINE Alu 3 311 0 1752 157 10 13 chr5 151934234 151934534 -47695616 + AluSq SINE Alu 1 299 -14 2120 80 0 4 chr5 151934540 151934802 -47695348 + AluY SINE Alu 39 299 -12 1134 100 39 61 chr5 151934802 151934982 -47695168 + AluSq SINE Alu 134 309 -4 2079 104 66 0 chr5 151935451 151935738 -47694412 - AluSx SINE Alu -6 306 1 195 244 0 24 chr5 151935743 151935784 -47694366 - L2 LINE L2 -94 3178 3139 1212 59 0 0 chr5 151936331 151936467 -47693683 + AluSq/x SINE Alu 1 136 -176 2176 134 0 10 chr5 151936467 151936773 -47693377 + AluSq SINE Alu 1 303 -10 2071 101 80 0 chr5 151936773 151937059 -47693091 + AluSq SINE Alu 1 309 -4 345 150 117 0 chr5 151937059 151937119 -47693031 - LTR10A LTR ERV1 -542 67 1 249 157 20 20 chr5 151937141 151937192 -47692958 - LTR10B LTR ERV1 -496 51 1 447 308 0 0 chr5 151937192 151937312 -47692838 - MIR SINE MIR -82 180 61 193 312 119 9 chr5 151937793 151937953 -47692197 + MIR SINE MIR 48 262 0 310 299 97 26 chr5 151938556 151938710 -47691440 + L3b LINE CR1 1302 1466 -117 594 270 18 12 chr5 151938728 151938891 -47691259 - MIR SINE MIR -51 211 48 207 265 29 44 chr5 151939273 151939341 -47690809 - MIR3 SINE MIR -38 170 104 1456 143 9 13 chr5 151939402 151939633 -47690517 + AluSx SINE Alu 1 230 -82 3609 36 20 2 chr5 151939634 151940081 -47690069 + LTR2B LTR ERV1 1 455 -35 3248 85 22 39 chr5 151940181 151940688 -47689462 + Harlequin LTR ERV1 396 893 -6003 2706 90 43 6 chr5 151940681 151941149 -47689001 + Harlequin LTR ERV1 1572 2056 -4840 * 4212 56 28 2 chr5 151941142 151941681 -47688469 + Harlequin LTR ERV1 3407 3959 -2937 * 16605 145 8 14 chr5 151941675 151944412 -47685738 + Harlequin LTR ERV1 4175 6896 0 4108 46 17 0 chr5 151944413 151944895 -47685255 + LTR2B LTR ERV1 1 490 0 421 143 11 77 chr5 151944895 151944986 -47685164 + AluJ/FRAM SINE Alu 228 312 0 1545 172 0 82 chr5 151945010 151945313 -47684837 + AluJb SINE Alu 1 278 -34 402 331 53 30 chr5 151945380 151945494 -47684656 + L1ME LINE L1 5529 5622 -499 2006 128 0 38 chr5 151945494 151945676 -47684474 - AluSx SINE Alu -5 307 141 2467 88 0 0 chr5 151945676 151945981 -47684169 - AluY SINE Alu -6 305 1 2006 128 0 38 chr5 151945981 151946117 -47684033 - AluSx SINE Alu -171 141 1 402 331 53 30 chr5 151946117 151946150 -47684000 + L1ME LINE L1 5622 5653 -468 2412 81 0 3 chr5 151946155 151946453 -47683697 + AluSx SINE Alu 1 297 -15 481 132 15 0 chr5 151946533 151946601 -47683549 - AluSg/x SINE Alu -30 279 211 328 134 15 15 chr5 151946610 151946677 -47683473 + L1MB8 LINE L1 6101 6167 -11 2137 88 7 7 chr5 151946699 151947013 -47683137 + AluSq SINE Alu 1 314 0 1894 101 3 56 chr5 151947154 151947302 -47682848 - AluSx SINE Alu -39 273 119 1900 105 4 0 chr5 151947302 151947597 -47682553 - AluSp SINE Alu 0 330 35 1895 135 31 3 chr5 151947599 151947887 -47682263 - AluSx SINE Alu -15 297 2 1894 101 3 56 chr5 151947887 151948022 -47682128 - AluSx SINE Alu -194 118 1 497 189 35 99 chr5 151948073 151948130 -47682020 - L1MC5 LINE L1 -263 7698 7639 2502 68 0 13 chr5 151948130 151948440 -47681710 + AluY SINE Alu 1 306 -5 497 189 35 99 chr5 151948440 151948583 -47681567 - L1MC5 LINE L1 -322 7639 7511 706 143 0 0 chr5 151948584 151948703 -47681447 - L1MB8 LINE L1 -1 6177 6059 324 119 34 0 chr5 151948709 151948768 -47681382 - Alu SINE Alu -1 299 239 861 111 0 0 chr5 151948778 151948886 -47681264 - AluSq/x SINE Alu -205 108 1 2501 76 0 0 chr5 151948915 151949216 -47680934 + AluY SINE Alu 1 301 -10 219 36 0 0 chr5 151949250 151949278 -47680872 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 552 149 11 11 chr5 151949282 151949369 -47680781 - AluSx SINE Alu -30 280 194 993 145 0 0 chr5 151949377 151949515 -47680635 - AluSx SINE Alu -174 139 2 1173 151 65 6 chr5 151949534 151949786 -47680364 + L1MB3 LINE L1 5672 5932 -251 2244 89 14 7 chr5 151949823 151950116 -47680034 + AluSp SINE Alu 3 297 -16 1664 200 92 45 chr5 151950144 151950266 -47679884 + L1MD2 LINE L1 5767 5882 -477 2393 83 0 0 chr5 151950266 151950555 -47679595 - AluSg SINE Alu -21 289 1 1664 200 92 45 chr5 151950555 151950830 -47679320 + L1MD2 LINE L1 5882 6143 -216 2150 104 0 17 chr5 151950830 151951127 -47679023 - AluSx SINE Alu -18 294 3 1664 200 92 45 chr5 151951127 151951163 -47678987 + L1MD2 LINE L1 6143 6176 -183 2256 97 3 0 chr5 151951163 151951451 -47678699 - AluSq SINE Alu -24 289 1 1664 200 92 45 chr5 151951451 151951572 -47678578 + L1MD2 LINE L1 6176 6349 -10 1499 102 20 0 chr5 151951604 151951801 -47678349 + AluY SINE Alu 104 304 -7 2299 91 3 10 chr5 151951941 151952238 -47677912 + AluSq SINE Alu 1 295 -18 2142 145 0 0 chr5 151952248 151952545 -47677605 + AluSx SINE Alu 1 297 -15 2457 89 0 0 chr5 151952552 151952854 -47677296 + AluSg SINE Alu 1 302 -8 511 234 32 0 chr5 151952864 151952988 -47677162 + FLAM_A SINE Alu 4 131 -2 1024 105 0 0 chr5 151953004 151953137 -47677013 + AluSq/x SINE Alu 3 135 -178 2206 114 3 0 chr5 151953137 151953435 -47676715 + AluSx SINE Alu 1 299 -13 573 126 11 11 chr5 151953597 151953705 -47676445 - AluSx SINE Alu 0 303 196 1009 130 0 0 chr5 151953713 151953851 -47676299 - AluSx SINE Alu -174 139 2 1033 118 75 0 chr5 151953892 151954078 -47676072 + L1MB3 LINE L1 5689 5888 -295 2353 85 7 0 chr5 151954132 151954425 -47675725 - AluSg SINE Alu -14 296 2 735 165 63 0 chr5 151955390 151955517 -47674633 - FLAM_C SINE Alu 0 143 9 2226 100 3 10 chr5 151955519 151955819 -47674331 - AluSq SINE Alu -15 298 1 225 0 0 0 chr5 151955837 151955862 -47674288 + (CA)n Simple_repeat Simple_repeat 1 25 0 251 177 63 13 chr5 151955892 151955971 -47674179 - L1ME3 LINE L1 -3 6159 6077 2357 79 7 13 chr5 151956005 151956308 -47673842 - AluSc SINE Alu -8 301 1 377 264 63 86 chr5 151956308 151956465 -47673685 - L1MC4a LINE L1 -1923 5885 5731 625 206 15 30 chr5 151956465 151956596 -47673554 - FLAM_A SINE Alu -4 129 1 377 264 63 86 chr5 151956596 151956612 -47673538 - L1MC4a LINE L1 -2077 5731 5716 2215 117 3 3 chr5 151956646 151956953 -47673197 - AluSg1 SINE Alu -2 307 1 2258 114 0 10 chr5 151956957 151957256 -47672894 - AluSx SINE Alu -16 296 1 2066 112 13 0 chr5 151957266 151957571 -47672579 - AluSq SINE Alu -4 309 1 995 113 0 7 chr5 151957571 151957713 -47672437 - AluSg SINE Alu -169 141 1 1900 144 0 10 chr5 151957717 151958015 -47672135 - AluSx SINE Alu -17 295 1 578 82 12 0 chr5 151958021 151958106 -47672044 + (TTCC)n Simple_repeat Simple_repeat 3 88 0 1024 137 6 39 chr5 151958109 151958120 -47672030 - AluSg/x SINE Alu -2 307 297 1294 151 9 111 chr5 151958120 151958238 -47671912 - AluSc SINE Alu 0 299 171 2344 55 0 3 chr5 151958238 151958529 -47671621 + AluY SINE Alu 1 290 -21 1294 151 9 111 chr5 151958529 151958742 -47671408 - AluSc SINE Alu -128 171 2 1024 137 6 39 chr5 151958742 151958912 -47671238 - AluSg/x SINE Alu -12 297 132 2304 96 0 0 chr5 151958912 151959224 -47670926 - AluSx SINE Alu 0 312 1 1087 147 0 6 chr5 151959247 151959447 -47670703 + FRAM SINE Alu 1 199 0 216 97 0 0 chr5 151959836 151959867 -47670283 + (CAT)n Simple_repeat Simple_repeat 2 32 0 521 260 128 29 chr5 151959867 151960071 -47670079 - MIR SINE MIR -11 251 28 2182 96 3 3 chr5 151960074 151960377 -47669773 - AluSg SINE Alu -7 303 1 8487 137 42 91 chr5 151960399 151962184 -47667966 + pTR5 LTR ERV1 741 2437 -1 1901 132 0 14 chr5 151962309 151962596 -47667554 + AluSq SINE Alu 17 299 -14 444 321 42 51 chr5 151962855 151963070 -47667080 - L2 LINE L2 -52 3220 3008 2117 105 0 16 chr5 151963394 151963698 -47666452 - AluSx SINE Alu -13 299 1 2230 91 0 16 chr5 151963726 151963906 -47666244 - AluSp SINE Alu 0 313 139 2363 82 3 0 chr5 151963906 151964212 -47665938 - AluSp SINE Alu -6 307 1 2230 91 0 16 chr5 151964212 151964349 -47665801 - AluSp SINE Alu -174 139 1 2168 105 0 10 chr5 151965004 151965310 -47664840 - AluSx SINE Alu -9 303 1 413 214 8 11 chr5 151965313 151965418 -47664732 - L1ME2 LINE L1 -58 6263 6018 726 162 0 0 chr5 151965451 151965562 -47664588 - FLAM_A SINE Alu -30 112 2 2423 199 48 35 chr5 151965583 151966132 -47664018 - L1ME2 LINE L1 -164 6000 5441 669 140 0 0 chr5 151966132 151966232 -47663918 - HY3 scRNA scRNA -1 100 1 2423 199 48 35 chr5 151966232 151966260 -47663890 - L1ME2 LINE L1 -723 5441 5415 2017 131 16 0 chr5 151966265 151966571 -47663579 - AluJb SINE Alu -1 311 1 492 210 112 26 chr5 151966641 151966874 -47663276 + L1M4 LINE L1 2835 3087 -3059 2276 87 3 7 chr5 151966875 151967185 -47662965 + AluSc SINE Alu 1 309 0 2192 103 3 0 chr5 151967185 151967485 -47662665 + AluSp SINE Alu 1 301 -12 1148 113 16 21 chr5 151967486 151967672 -47662478 + AluSg/x SINE Alu 126 310 0 335 214 91 157 chr5 151967682 151967886 -47662264 + L1M4 LINE L1 3111 3339 -2807 226 179 0 36 chr5 151967886 151967942 -47662208 - MADE1 DNA Mariner 0 80 27 335 214 91 157 chr5 151967942 151968065 -47662085 + L1M4 LINE L1 3339 3468 -2678 2272 91 0 0 chr5 151968066 151968363 -47661787 - AluSg SINE Alu -13 297 1 1801 97 11 15 chr5 151968366 151968634 -47661516 - AluSq SINE Alu -15 298 32 343 192 0 111 chr5 151968635 151968696 -47661454 + L1M4 LINE L1 3652 3700 -2446 1983 119 7 3 chr5 151968696 151968999 -47661151 + AluSx SINE Alu 1 304 -8 343 192 0 111 chr5 151968999 151969036 -47661114 + L1M4 LINE L1 3700 3739 -2407 272 263 38 0 chr5 151969025 151969105 -47661045 + L1ME4a LINE L1 5601 5683 -438 * 842 176 64 11 chr5 151969150 151969337 -47660813 + AluJo SINE Alu 105 301 -11 710 246 85 29 chr5 151969356 151969511 -47660639 + L1ME4a LINE L1 5692 5837 -284 2400 62 0 3 chr5 151969511 151969818 -47660332 - AluY SINE Alu -5 306 1 710 246 85 29 chr5 151969818 151970004 -47660146 + L1ME4a LINE L1 5837 6052 -69 1468 186 7 7 chr5 151970040 151970314 -47659836 - AluJb SINE Alu -21 291 18 2293 63 3 3 chr5 151970375 151970675 -47659475 + AluY SINE Alu 1 300 -11 432 303 0 8 chr5 151970868 151970987 -47659163 + MIR3 SINE MIR 64 181 -27 2136 86 7 10 chr5 151971266 151971430 -47658720 - AluSq SINE Alu -13 300 136 2139 88 7 0 chr5 151971430 151971726 -47658424 - AluSg SINE Alu -12 298 1 2136 86 7 10 chr5 151971726 151971862 -47658288 - AluSq SINE Alu -177 136 1 24 53 0 0 chr5 151972568 151972606 -47657544 + GC_rich Low_complexity Low_complexity 1 38 0 207 114 0 0 chr5 151972765 151972800 -47657350 + (CGG)n Simple_repeat Simple_repeat 1 35 0 230 179 15 60 chr5 151972951 151973018 -47657132 + C-rich Low_complexity Low_complexity 2 65 0 676 166 14 36 chr5 151974174 151974313 -47655837 - BC200 scRNA scRNA -64 136 1 2236 57 3 10 chr5 151974882 151975178 -47654972 + AluY SINE Alu 2 295 -16 1952 128 0 3 chr5 151975393 151975682 -47654468 - AluSg SINE Alu -22 288 1 2069 102 3 3 chr5 151975687 151975982 -47654168 - AluSx SINE Alu -17 295 1 1918 123 33 3 chr5 151977246 151977547 -47652603 - AluSx SINE Alu -2 310 1 1648 156 0 4 chr5 151977612 151977908 -47652242 + AluJb SINE Alu 7 301 0 591 249 80 55 chr5 151977915 151978116 -47652034 - MER102a DNA MER1_type -9 321 116 2246 96 0 0 chr5 151978311 151978612 -47651538 - AluSg SINE Alu -9 301 1 508 127 0 0 chr5 151978661 151978732 -47651418 - AluS SINE Alu -241 72 2 2267 95 0 0 chr5 151978744 151979049 -47651101 - AluSx SINE Alu -7 305 1 2174 88 7 7 chr5 151979275 151979570 -47650580 + AluSx SINE Alu 1 295 -17 2185 105 7 0 chr5 151979593 151979899 -47650251 + AluY SINE Alu 1 308 -3 2139 112 0 0 chr5 151979906 151980201 -47649949 + AluSg1 SINE Alu 1 295 -14 1451 158 17 61 chr5 151981191 151981514 -47648636 + AluJb SINE Alu 1 310 0 1325 128 179 20 chr5 151981560 151981723 -47648427 - AluSg SINE Alu -8 292 156 1751 120 0 0 chr5 151981723 151981981 -47648169 - AluY SINE Alu -8 303 46 1325 128 179 20 chr5 151981981 151982068 -47648082 - AluSg SINE Alu -144 156 2 509 71 14 0 chr5 151982113 151982183 -47647967 - MER41A LTR ERV1 -88 466 396 2238 91 0 0 chr5 151982349 151982645 -47647505 + AluSg SINE Alu 6 301 -9 297 310 131 21 chr5 151982692 151982837 -47647313 - MIR SINE MIR -71 191 31 381 222 0 0 chr5 151982937 151983036 -47647114 + CT-rich Low_complexity Low_complexity 2 100 0 191 322 77 56 chr5 151983274 151983417 -47646733 + L2 LINE L2 1866 2011 -1303 1768 158 14 3 chr5 151983534 151983826 -47646324 + AluJo SINE Alu 1 295 -17 1808 132 24 20 chr5 151983863 151984159 -47645991 - AluSx SINE Alu -11 301 5 25 31 0 0 chr5 151984172 151984204 -47645946 + AT_rich Low_complexity Low_complexity 1 32 0 2383 75 0 3 chr5 151984239 151984545 -47645605 + AluY SINE Alu 1 305 -6 2138 73 7 14 chr5 151984907 151985218 -47644932 + AluY SINE Alu 1 311 0 397 88 0 0 chr5 151985298 151985355 -47644795 - AluSp/q SINE Alu -1 302 246 1189 92 6 0 chr5 151985358 151985522 -47644628 + AluSq SINE Alu 141 305 -8 192 77 0 0 chr5 151985955 151985981 -47644169 + (A)n Simple_repeat Simple_repeat 1 26 0 355 220 100 40 chr5 151986000 151986100 -47644050 + MIR SINE MIR 84 189 -73 507 248 7 27 chr5 151986156 151986305 -47643845 + L1ME1 LINE L1 5689 5834 -332 426 198 135 0 chr5 151986402 151986498 -47643652 + LTR41 LTR ERVL 59 167 -606 1445 166 35 18 chr5 151986961 151987245 -47642905 + AluJo SINE Alu 1 289 -23 1042 232 85 12 chr5 151987376 151987706 -47642444 - MLT1C LTR MaLR 0 467 128 1184 98 6 0 chr5 151987719 151987883 -47642267 - AluY SINE Alu -146 165 1 210 154 0 0 chr5 151988160 151988199 -47641951 + T-rich Low_complexity Low_complexity 1 39 0 2176 106 0 3 chr5 151988619 151988921 -47641229 - AluSq SINE Alu -6 307 7 1555 190 27 14 chr5 151989633 151989648 -47640502 - AluJb SINE Alu -2 300 287 315 0 0 0 chr5 151989648 151989683 -47640467 + (TG)n Simple_repeat Simple_repeat 2 36 0 1555 190 27 14 chr5 151989683 151989962 -47640188 - AluJb SINE Alu -15 287 2 475 189 107 33 chr5 151990036 151990158 -47639992 - MER104 DNA Tc2 0 180 50 1821 132 0 36 chr5 151990163 151990348 -47639802 - AluSx SINE Alu 0 312 148 2145 103 3 10 chr5 151990348 151990660 -47639490 - AluSp SINE Alu -3 310 1 1821 132 0 36 chr5 151990660 151990803 -47639347 - AluSx SINE Alu -164 148 1 270 268 0 0 chr5 151990870 151990926 -47639224 - L2 LINE L2 -9 3263 3208 2168 74 7 10 chr5 151990983 151991281 -47638869 + AluSg SINE Alu 5 301 -9 991 172 20 119 chr5 151991298 151991322 -47638828 + AluJo SINE Alu 14 39 -273 1316 172 114 8 chr5 151991322 151991584 -47638566 - AluJb SINE Alu -22 290 1 991 172 20 119 chr5 151991584 151991685 -47638465 + AluJo SINE Alu 39 148 -164 1910 93 57 7 chr5 151991685 151991964 -47638186 - AluSc SINE Alu -16 293 1 991 172 20 119 chr5 151991964 151992139 -47638011 + AluJo SINE Alu 148 285 -27 181 193 193 34 chr5 151992245 151992333 -47637817 - L2 LINE L2 -259 3054 2953 2250 75 0 7 chr5 151992386 151992679 -47637471 + AluSg SINE Alu 1 291 -19 1164 98 5 62 chr5 151992683 151992877 -47637273 - MER46B DNA MER2_type -1 235 53 2007 108 0 0 chr5 151992880 151993181 -47636969 - AluSg SINE Alu 0 306 6 1033 162 72 65 chr5 151993186 151993476 -47636674 - AluJo SINE Alu 0 312 21 621 168 0 0 chr5 151993485 151993586 -47636564 - AluSx SINE Alu -15 295 195 1059 97 7 0 chr5 151993586 151993730 -47636420 - AluSx SINE Alu -168 145 1 773 204 7 13 chr5 151993730 151993882 -47636268 - MER46B DNA MER2_type -179 57 32 2409 69 0 0 chr5 151993886 151994190 -47635960 - AluY SINE Alu -7 304 1 2096 128 0 0 chr5 151994190 151994494 -47635656 - AluSx SINE Alu -7 305 1 904 99 59 89 chr5 151994494 151994696 -47635454 + L1MA8 LINE L1 6093 6288 -3 2127 115 0 0 chr5 151994699 151994994 -47635156 + AluSx SINE Alu 1 295 -17 2706 128 103 56 chr5 151995061 151995633 -47634517 + MER7C DNA MER2_type 3 601 -1 2273 83 3 3 chr5 151995747 151996060 -47634090 - AluSq SINE Alu 0 313 1 2128 107 3 0 chr5 151996129 151996429 -47633721 - AluSp SINE Alu -12 301 1 1550 162 6 60 chr5 151996440 151996754 -47633396 - AluJo SINE Alu -15 297 1 1013 81 0 0 chr5 151997056 151997192 -47632958 + AluSc SINE Alu 174 309 0 21 0 0 0 chr5 151997416 151997437 -47632713 + AT_rich Low_complexity Low_complexity 1 21 0 2391 64 0 0 chr5 151997711 151998006 -47632144 + AluY SINE Alu 1 295 -16 1310 154 32 29 chr5 151998152 151998205 -47631945 - AluJo SINE Alu -24 288 237 5619 66 49 25 chr5 151998205 151998630 -47631520 - LTR17 LTR ERV1 0 780 328 2103 82 24 0 chr5 151998630 151998922 -47631228 + AluY SINE Alu 5 303 -8 5619 66 49 25 chr5 151998922 151999257 -47630893 - LTR17 LTR ERV1 -452 328 2 1310 154 32 29 chr5 151999257 151999449 -47630701 - AluJo SINE Alu -75 237 42 270 0 0 0 chr5 151999478 151999508 -47630642 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1267 112 5 48 chr5 151999512 151999718 -47630432 - AluSg/x SINE Alu -31 281 85 1558 117 35 98 chr5 152000002 152000318 -47629832 - AluJo SINE Alu -16 296 1 900 166 0 0 chr5 152000357 152000502 -47629648 + FRAM SINE Alu 18 162 -14 1720 138 47 4 chr5 152000506 152000781 -47629369 + AluSx SINE Alu 3 289 -23 2241 85 0 3 chr5 152001017 152001312 -47628838 - AluY SINE Alu -17 294 1 976 97 0 0 chr5 152001465 152001599 -47628551 + AluSq SINE Alu 85 218 -95 1962 50 16 12 chr5 152001699 152001957 -47628193 - AluY SINE Alu -52 259 1 22 35 0 0 chr5 152001982 152002011 -47628139 + AT_rich Low_complexity Low_complexity 1 29 0 2083 118 0 22 chr5 152002177 152002492 -47627658 + AluSx SINE Alu 1 308 -4 1946 133 0 7 chr5 152002551 152002859 -47627291 + AluSx SINE Alu 3 308 -4 2256 78 17 0 chr5 152003216 152003509 -47626641 + AluY SINE Alu 1 298 -13 1331 151 80 18 chr5 152004028 152004316 -47625834 + L1ME1 LINE L1 5836 6140 -26 2345 67 6 29 chr5 152004332 152004647 -47625503 - AluY SINE Alu -6 305 1 198 0 0 0 chr5 152004647 152004669 -47625481 + (TTA)n Simple_repeat Simple_repeat 2 23 0 785 136 0 8 chr5 152004676 152004794 -47625356 - FLAM_C SINE Alu -16 117 1 2182 101 0 0 chr5 152004821 152005099 -47625051 + AluSg SINE Alu 1 278 -32 2445 88 0 0 chr5 152005222 152005530 -47624620 + AluSg SINE Alu 2 309 -1 1821 103 4 0 chr5 152005790 152006032 -47624118 + AluSq SINE Alu 56 298 -15 1830 169 39 0 chr5 152006304 152006612 -47623538 - MER2 DNA MER2_type -25 320 1 2113 121 13 19 chr5 152006699 152007013 -47623137 + AluSx SINE Alu 1 312 0 1670 163 35 28 chr5 152007497 152007786 -47622364 + AluJo SINE Alu 1 291 -21 259 295 23 0 chr5 152007821 152007950 -47622200 + (TA)n Simple_repeat Simple_repeat 1 132 0 2334 110 0 0 chr5 152008119 152008428 -47621722 + AluSg SINE Alu 1 309 -1 2318 101 0 3 chr5 152008510 152008816 -47621334 + AluY SINE Alu 1 305 -6 601 231 59 12 chr5 152008849 152009018 -47621132 + MER5A DNA MER1_type 1 177 -12 2228 118 0 6 chr5 152009181 152009495 -47620655 - AluSx SINE Alu 0 312 1 2292 116 6 0 chr5 152009993 152010304 -47619846 + AluSp SINE Alu 1 313 0 2299 105 3 10 chr5 152010316 152010630 -47619520 + AluSx SINE Alu 1 312 0 1695 110 0 0 chr5 152010948 152011176 -47618974 - AluSg/x SINE Alu 0 312 85 2437 78 0 0 chr5 152011329 152011623 -47618527 + AluY SINE Alu 1 294 -17 1834 138 47 4 chr5 152011859 152012134 -47618016 - AluSx SINE Alu -23 289 3 960 175 0 18 chr5 152012138 152012304 -47617846 - FRAM SINE Alu -16 160 1 1673 117 35 98 chr5 152012322 152012638 -47617512 + AluJo SINE Alu 1 296 -16 1366 107 5 48 chr5 152012922 152013128 -47617022 + AluSg/x SINE Alu 83 279 -31 237 33 0 0 chr5 152013132 152013162 -47616988 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1407 154 32 29 chr5 152013191 152013383 -47616767 + AluJo SINE Alu 42 237 -75 5598 64 49 25 chr5 152013383 152013718 -47616432 + LTR17 LTR ERV1 2 328 -452 2228 82 24 0 chr5 152013718 152014010 -47616140 - AluY SINE Alu -8 303 5 5598 64 49 25 chr5 152014010 152014435 -47615715 + LTR17 LTR ERV1 328 780 0 1407 154 32 29 chr5 152014435 152014488 -47615662 + AluJo SINE Alu 237 288 -24 2524 64 0 0 chr5 152014633 152014928 -47615222 - AluY SINE Alu -16 295 1 21 0 0 0 chr5 152015202 152015223 -47614927 + AT_rich Low_complexity Low_complexity 1 21 0 1059 82 0 0 chr5 152015447 152015582 -47614568 - AluSc SINE Alu -1 308 174 1722 164 0 60 chr5 152015884 152016201 -47613949 + AluJo SINE Alu 1 298 -14 2177 118 3 6 chr5 152016212 152016526 -47613624 + AluSp SINE Alu 1 313 0 2134 114 24 3 chr5 152016564 152016862 -47613288 - AluSx SINE Alu -8 304 1 2179 119 0 7 chr5 152017565 152017867 -47612283 - AluSx SINE Alu -12 300 1 1706 178 0 33 chr5 152018086 152018390 -47611760 + AluJb SINE Alu 1 294 -18 2102 120 3 10 chr5 152018397 152018698 -47611452 + AluSg1 SINE Alu 5 303 -6 2202 123 0 0 chr5 152018807 152019116 -47611034 - AluSx SINE Alu -3 309 1 1859 156 7 7 chr5 152019159 152019486 -47610664 + AluJb SINE Alu 1 312 0 207 259 0 17 chr5 152019700 152019758 -47610392 - MIR SINE MIR -49 213 157 2033 92 82 11 chr5 152020129 152020411 -47609739 + AluSg SINE Alu 1 302 -8 1933 94 6 72 chr5 152020411 152020730 -47609420 + AluSq SINE Alu 1 298 -15 948 167 67 23 chr5 152020737 152020906 -47609244 + L1M4 LINE L1 5107 5267 -911 2123 114 10 3 chr5 152020906 152021203 -47608947 - AluSx SINE Alu -13 299 1 948 167 67 23 chr5 152021203 152021363 -47608787 + L1M4 LINE L1 5267 5440 -738 1698 177 17 0 chr5 152021368 152021662 -47608488 + AluJo SINE Alu 1 299 -13 2682 55 0 0 chr5 152022076 152022385 -47607765 + AluY SINE Alu 1 309 -2 256 143 36 0 chr5 152022440 152022496 -47607654 + CT-rich Low_complexity Low_complexity 3 60 0 1506 171 31 44 chr5 152022515 152022808 -47607342 - AluJo SINE Alu -23 289 1 2242 85 0 3 chr5 152022922 152023228 -47606922 - AluSx SINE Alu 0 305 1 2111 116 3 3 chr5 152023576 152023869 -47606281 - AluSg SINE Alu -17 293 1 1814 152 0 36 chr5 152024495 152024798 -47605352 + AluJo SINE Alu 6 297 -15 2008 143 17 3 chr5 152024915 152025216 -47604934 + AluSx SINE Alu 1 305 -7 808 128 0 57 chr5 152025234 152025375 -47604775 + FLAM_C SINE Alu 1 133 0 2265 108 0 7 chr5 152025568 152025865 -47604285 + AluSx SINE Alu 1 295 -17 818 125 0 97 chr5 152026028 152026142 -47604008 + AluJo/FLAM SINE Alu 3 102 -200 2413 78 3 3 chr5 152026142 152026436 -47603714 - AluSp SINE Alu -19 294 1 818 125 0 97 chr5 152026436 152026465 -47603685 + AluJo/FLAM SINE Alu 102 132 -170 2348 103 0 3 chr5 152026483 152026836 -47603314 - AluSg SINE Alu 0 352 1 2386 83 3 0 chr5 152027026 152027315 -47602835 + AluSg SINE Alu 1 290 -20 1551 169 81 7 chr5 152027358 152027630 -47602520 + AluJb SINE Alu 3 294 -18 2437 97 0 3 chr5 152027941 152028252 -47601898 - AluSq SINE Alu -2 311 2 22 35 0 0 chr5 152028716 152028745 -47601405 + AT_rich Low_complexity Low_complexity 1 29 0 226 233 0 0 chr5 152029519 152029562 -47600588 + (TG)n Simple_repeat Simple_repeat 1 43 0 739 152 0 16 chr5 152029562 152029687 -47600463 - FLAM_A SINE Alu -2 140 18 2107 103 21 4 chr5 152030566 152030847 -47599303 + AluSx SINE Alu 17 302 -10 647 203 168 0 chr5 152030991 152031134 -47599016 - AluJb SINE Alu -10 302 136 2412 77 0 3 chr5 152031968 152032265 -47597885 + AluY SINE Alu 1 296 -15 2300 90 0 0 chr5 152032595 152032884 -47597266 - AluSg SINE Alu -6 304 16 1077 130 13 0 chr5 152033134 152033288 -47596862 - AluSg/x SINE Alu -21 291 136 2136 90 19 35 chr5 152033290 152033601 -47596549 - AluSg SINE Alu 0 310 5 1825 158 0 11 chr5 152033605 152033913 -47596237 - AluSx SINE Alu 0 305 1 322 272 29 73 chr5 152033917 152034008 -47596142 - L1ME LINE L1 -382 5739 5654 2295 107 0 7 chr5 152034008 152034182 -47595968 - AluSp SINE Alu -6 307 134 2425 76 0 0 chr5 152034182 152034484 -47595666 - AluY SINE Alu -9 302 1 2295 107 0 7 chr5 152034484 152034618 -47595532 - AluSp SINE Alu -179 134 1 322 272 29 73 chr5 152034618 152034662 -47595488 - L1ME LINE L1 -467 5654 5610 2321 76 0 3 chr5 152034693 152034984 -47595166 + AluSg SINE Alu 5 294 -16 281 359 14 0 chr5 152035438 152035580 -47594570 + L1ME LINE L1 5573 5716 -405 2046 152 0 3 chr5 152035661 152035957 -47594193 + AluSx SINE Alu 1 295 -17 1642 67 0 0 chr5 152036132 152036326 -47593824 - AluSq SINE Alu -7 306 113 483 321 64 0 chr5 152036418 152036605 -47593545 + MIR SINE MIR 2 200 -62 27 22 0 22 chr5 152036713 152036739 -47593411 + AT_rich Low_complexity Low_complexity 1 27 -17 2335 88 3 3 chr5 152036739 152037035 -47593115 - AluSp SINE Alu -17 296 1 27 22 0 22 chr5 152037035 152037053 -47593097 + AT_rich Low_complexity Low_complexity 27 44 0 1922 157 14 0 chr5 152037879 152038172 -47591978 + AluSx SINE Alu 1 297 -15 2569 109 48 31 chr5 152038273 152038344 -47591806 - MSTA LTR MaLR 0 428 360 2348 83 3 0 chr5 152038344 152038634 -47591516 + AluSp SINE Alu 2 292 -21 2569 109 48 31 chr5 152038634 152038983 -47591167 - MSTA LTR MaLR -68 360 1 1773 154 18 11 chr5 152039724 152040034 -47590116 + AluJb SINE Alu 1 312 0 1870 181 0 0 chr5 152040384 152040682 -47589468 - AluJo SINE Alu -12 300 3 201 292 46 45 chr5 152040774 152040911 -47589239 + MIR SINE MIR 52 185 -76 2193 108 0 19 chr5 152040990 152041304 -47588846 - AluSc SINE Alu -1 308 1 2413 65 0 23 chr5 152041370 152041680 -47588470 + AluY SINE Alu 1 303 -8 1370 133 9 14 chr5 152041686 152041896 -47588254 + AluSg SINE Alu 2 210 -100 366 75 57 0 chr5 152041896 152041949 -47588201 + AluSg/x SINE Alu 76 131 -169 189 0 0 0 chr5 152041951 152041972 -47588178 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2082 112 13 16 chr5 152042449 152042752 -47587398 - AluSx SINE Alu -6 306 5 247 233 0 0 chr5 152043079 152043139 -47587011 - FLAM SINE Alu 0 133 74 * 347 165 36 13 chr5 152043109 152043198 -47586952 - AluSp SINE Alu -112 191 137 2026 109 18 4 chr5 152043271 152043547 -47586603 + AluSg SINE Alu 1 280 -30 1331 148 0 171 chr5 152043828 152044180 -47585970 - AluJo SINE Alu -20 292 1 1120 182 0 0 chr5 152044206 152044376 -47585774 - AluJb SINE Alu -9 303 134 2172 126 3 0 chr5 152044376 152044670 -47585480 - AluSx SINE Alu -17 295 1 1906 164 3 3 chr5 152044835 152045139 -47585011 - AluJb SINE Alu -8 304 1 1679 174 9 41 chr5 152047438 152047755 -47582395 - AluJb SINE Alu -5 307 1 2384 90 3 0 chr5 152048802 152049103 -47581047 + AluSp SINE Alu 1 302 -11 2196 116 13 3 chr5 152049396 152049699 -47580451 - AluSx SINE Alu -6 306 1 339 205 8 34 chr5 152049814 152049876 -47580274 + CT-rich Low_complexity Low_complexity 2 61 -54 195 69 0 0 chr5 152049876 152049905 -47580245 + (CCTG)n Simple_repeat Simple_repeat 2 30 0 339 205 8 34 chr5 152049905 152049959 -47580191 + CT-rich Low_complexity Low_complexity 61 115 0 1062 180 0 0 chr5 152049985 152050163 -47579987 - FRAM SINE Alu -5 171 1 2273 79 7 23 chr5 152051753 152052056 -47578094 + AluSp SINE Alu 1 298 -15 191 253 169 0 chr5 152054599 152054682 -47575468 - MIR SINE MIR -134 128 32 353 277 12 0 chr5 152055526 152055609 -47574541 - MIR SINE MIR -16 246 163 28 86 0 0 chr5 152056254 152056324 -47573826 + GC_rich Low_complexity Low_complexity 1 70 0 346 364 101 0 chr5 152057350 152057567 -47572583 + MIR SINE MIR 22 260 -2 390 142 149 3 chr5 152058422 152058571 -47571579 - MER20 DNA MER1_type -2 217 1 213 323 32 48 chr5 152059282 152059406 -47570744 - L3b LINE CR1 -170 1413 1292 266 276 12 52 chr5 152061385 152061506 -47568644 + MIR SINE MIR 51 165 -43 181 337 36 12 chr5 152063493 152063576 -47566574 + MIR SINE MIR 178 262 0 391 294 206 0 chr5 152063778 152063938 -47566212 + MER91A DNA MER1_type 4 196 0 188 296 128 56 chr5 152063938 152064178 -47565972 - L2 LINE L2 -191 3081 2824 420 321 61 0 chr5 152064316 152064447 -47565703 + MIR SINE MIR 120 258 -4 186 271 21 0 chr5 152066572 152066620 -47563530 + MIR SINE MIR 105 153 -109 240 288 0 0 chr5 152067052 152067118 -47563032 + G-rich Low_complexity Low_complexity 1 66 0 271 217 24 12 chr5 152067175 152067258 -47562892 + (CGG)n Simple_repeat Simple_repeat 2 85 0 204 211 0 0 chr5 152067730 152067768 -47562382 + C-rich Low_complexity Low_complexity 5 42 0 270 56 0 0 chr5 152070206 152070242 -47559908 + (GGCTG)n Simple_repeat Simple_repeat 4 39 0 189 300 50 50 chr5 152070754 152070834 -47559316 - L2 LINE L2 0 3313 3234 390 57 0 0 chr5 152070991 152071044 -47559106 + (TG)n Simple_repeat Simple_repeat 1 53 0 476 332 23 51 chr5 152073107 152073363 -47556787 + MIR SINE MIR 13 261 -1 387 333 40 0 chr5 152073432 152073582 -47556568 + MIR SINE MIR 59 214 -48 2354 96 0 0 chr5 152075537 152075849 -47554301 - AluSx SINE Alu 0 312 1 286 269 19 144 chr5 152075913 152076073 -47554077 - MIR SINE MIR -29 233 94 231 284 11 53 chr5 152076096 152076191 -47553959 + L2 LINE L2 3171 3261 -11 255 339 59 8 chr5 152077141 152077259 -47552891 - MIR3 SINE MIR 0 208 85 22 35 0 0 chr5 152079979 152080008 -47550142 + GC_rich Low_complexity Low_complexity 1 29 0 378 326 14 7 chr5 152081566 152081707 -47548443 + MIR SINE MIR 25 166 -96 368 382 116 0 chr5 152082584 152082791 -47547359 - MIR SINE MIR -4 258 28 248 170 21 0 chr5 152083387 152083434 -47546716 + MIR SINE MIR 97 144 -64 478 334 16 55 chr5 152083563 152083786 -47546364 + MIR SINE MIR 4 219 -43 211 219 58 68 chr5 152084892 152085015 -47545135 - MIR SINE MIR -65 143 33 400 282 10 0 chr5 152085445 152085548 -47544602 + MIR SINE MIR 79 182 -80 215 206 279 15 chr5 152086290 152086358 -47543792 - MIR SINE MIR -61 147 62 182 133 0 0 chr5 152086566 152086596 -47543554 + MIR SINE MIR 112 141 -67 22 0 0 0 chr5 152087231 152087253 -47542897 + GC_rich Low_complexity Low_complexity 1 22 0 181 228 190 63 chr5 152087637 152087716 -47542434 + MIR SINE MIR 52 140 -68 908 223 84 9 chr5 152090682 152090897 -47539253 + MIR SINE MIR 16 246 -16 2243 73 0 0 chr5 152090916 152091225 -47538925 - AluSp SINE Alu 0 322 14 345 297 47 8 chr5 152091547 152091678 -47538472 - MIR SINE MIR -59 149 30 342 244 151 0 chr5 152091969 152092088 -47538062 + MIR SINE MIR 122 258 -4 2293 100 7 0 chr5 152092380 152092689 -47537461 + AluSx SINE Alu 1 311 -1 568 163 8 41 chr5 152093423 152093546 -47536604 + L1MB7 LINE L1 6066 6184 0 512 127 0 0 chr5 152093553 152093624 -47536526 + AluJ/FLAM SINE Alu 1 71 -241 180 97 0 0 chr5 152093647 152093678 -47536472 + (TAAAAA)n Simple_repeat Simple_repeat 1 31 0 704 289 24 14 chr5 152094470 152094681 -47535469 + MIR SINE MIR 48 260 -2 396 198 21 64 chr5 152094926 152095113 -47535037 + CT-rich Low_complexity Low_complexity 1 179 0 469 291 0 32 chr5 152095643 152095946 -47534204 + C-rich Low_complexity Low_complexity 1 293 0 312 244 0 56 chr5 152097960 152098050 -47532100 + MIR3 SINE MIR 87 171 -37 356 238 20 10 chr5 152098814 152098915 -47531235 + MER103 DNA DNA 21 122 -44 1934 164 7 3 chr5 152099003 152099308 -47530842 - AluJb SINE Alu -6 306 1 354 320 77 64 chr5 152099385 152099619 -47530531 + MIR SINE MIR 21 257 -5 198 224 0 0 chr5 152099903 152099952 -47530198 + (CAG)n Simple_repeat Simple_repeat 3 51 0 384 22 0 0 chr5 152101664 152101709 -47528441 + (CCCCAG)n Simple_repeat Simple_repeat 1 45 0 194 225 0 0 chr5 152104014 152104054 -47526096 + L3b LINE CR1 1352 1391 -192 332 261 43 0 chr5 152104854 152104946 -47525204 + MIR SINE MIR 119 214 -48 351 0 0 0 chr5 152105621 152105660 -47524490 + (TG)n Simple_repeat Simple_repeat 1 39 0 396 250 28 0 chr5 152106851 152106959 -47523191 - MIR SINE MIR -63 145 35 392 271 111 21 chr5 152108427 152108571 -47521579 - MIR SINE MIR -29 233 77 187 250 21 0 chr5 152110859 152110907 -47519243 + L2 LINE L2 3224 3272 0 240 222 56 67 chr5 152111045 152111135 -47519015 + MIR SINE MIR 51 139 -69 204 316 52 37 chr5 152111241 152111377 -47518773 - L2 LINE L2 -209 3063 2926 2077 107 7 0 chr5 152111654 152111943 -47518207 + AluSx SINE Alu 1 291 -21 204 343 8 52 chr5 152112115 152112249 -47517901 + MIR SINE MIR 16 143 -65 291 312 9 28 chr5 152112995 152113104 -47517046 + MIR SINE MIR 45 151 -57 212 295 9 98 chr5 152113143 152113255 -47516895 - MIR SINE MIR -51 211 110 448 304 31 36 chr5 152114266 152114460 -47515690 + MIR SINE MIR 28 220 -42 1526 149 67 4 chr5 152114531 152114799 -47515351 - AluJo SINE Alu -19 293 9 512 297 24 88 chr5 152115204 152115399 -47514751 + MIR SINE MIR 24 201 -61 1789 116 0 0 chr5 152115399 152115649 -47514501 + AluSq SINE Alu 59 308 -5 512 297 24 88 chr5 152115649 152115702 -47514448 + MIR SINE MIR 201 256 -6 315 0 0 0 chr5 152117705 152117740 -47512410 + (TG)n Simple_repeat Simple_repeat 2 36 0 355 316 119 26 chr5 152118541 152118734 -47511416 - MIR SINE MIR -29 233 23 366 251 19 28 chr5 152119455 152119575 -47510575 + MLT1K LTR MaLR 147 281 -307 2317 61 3 7 chr5 152119577 152119872 -47510278 + AluSg SINE Alu 1 294 -16 253 155 35 0 chr5 152120042 152120100 -47510050 + MLT1K LTR MaLR 524 583 -5 220 256 145 52 chr5 152120107 152120279 -47509871 + L2 LINE L2 2906 3093 -179 237 293 189 9 chr5 152120446 152120552 -47509598 + MIR SINE MIR 5 129 -133 2360 87 3 0 chr5 152121227 152121537 -47508613 - AluSp SINE Alu -1 312 2 1034 287 123 25 chr5 152121538 152121828 -47508322 + L2 LINE L2 2741 3001 -312 1895 141 3 0 chr5 152121828 152122139 -47508011 + AluSx SINE Alu 1 312 0 1034 287 123 25 chr5 152122139 152122345 -47507805 + L2 LINE L2 3001 3275 -38 2147 102 16 7 chr5 152122345 152122649 -47507501 + AluSq SINE Alu 1 307 -6 2345 80 0 0 chr5 152122649 152122949 -47507201 + AluSg SINE Alu 1 300 -10 205 241 19 0 chr5 152122954 152123008 -47507142 - MIR SINE MIR -111 151 97 1804 154 3 11 chr5 152123583 152123754 -47506396 - AluJb SINE Alu 0 305 135 2341 86 0 0 chr5 152123754 152124055 -47506095 - AluY SINE Alu -10 301 1 1804 154 3 11 chr5 152124055 152124190 -47505960 - AluJb SINE Alu -170 135 1 679 150 0 0 chr5 152124238 152124338 -47505812 - FLAM_C SINE Alu -33 110 11 490 289 36 108 chr5 152125857 152126005 -47504145 + MIR SINE MIR 6 163 -99 2166 106 0 7 chr5 152126005 152126323 -47503827 + AluSq SINE Alu 2 313 0 2171 89 10 23 chr5 152126325 152126629 -47503521 + AluSg SINE Alu 1 300 -10 490 289 36 108 chr5 152126629 152126754 -47503396 + MIR SINE MIR 164 262 0 400 303 90 21 chr5 152127306 152127540 -47502610 - MIR SINE MIR 0 262 13 855 300 134 12 chr5 152127594 152128302 -47501848 + L2 LINE L2 2503 3299 -14 581 253 203 0 chr5 152129664 152129846 -47500304 - MIR SINE MIR -28 234 16 26 0 0 0 chr5 152130264 152130290 -47499860 + AT_rich Low_complexity Low_complexity 1 26 0 216 0 0 0 chr5 152130653 152130677 -47499473 + (CCG)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr5 152130774 152130802 -47499348 + GC_rich Low_complexity Low_complexity 1 28 0 185 100 33 0 chr5 152131123 152131153 -47498997 + MIR SINE MIR 117 147 -61 235 325 39 58 chr5 152131895 152132049 -47498101 - MER5A DNA MER1_type 0 189 39 687 344 16 16 chr5 152132159 152132403 -47497747 + MIR SINE MIR 8 251 -11 2224 103 6 3 chr5 152133128 152133439 -47496711 - AluSx SINE Alu 0 312 1 226 356 23 8 chr5 152133659 152133791 -47496359 + (CATATA)n Simple_repeat Simple_repeat 1 134 0 * 253 391 11 0 chr5 152133712 152133886 -47496264 + (CA)n Simple_repeat Simple_repeat 1 176 0 446 271 123 68 chr5 152134127 152134206 -47495944 - MIR SINE MIR -7 255 182 2267 93 10 0 chr5 152134206 152134507 -47495643 - AluSc SINE Alu -5 304 1 446 271 123 68 chr5 152134507 152134575 -47495575 - MIR SINE MIR -80 182 119 1741 150 65 92 chr5 152134575 152134842 -47495308 - MLT1B LTR MaLR 0 390 117 2243 103 0 0 chr5 152134842 152135144 -47495006 - AluSx SINE Alu -10 302 1 2184 117 3 0 chr5 152135144 152135444 -47494706 - AluSq SINE Alu -12 301 1 1741 150 65 92 chr5 152135444 152135576 -47494574 - MLT1B LTR MaLR -271 119 1 446 271 123 68 chr5 152135576 152135663 -47494487 - MIR SINE MIR -143 119 7 252 0 0 0 chr5 152135679 152135707 -47494443 + (TG)n Simple_repeat Simple_repeat 2 29 0 217 297 16 0 chr5 152136352 152136416 -47493734 + MIR SINE MIR 109 173 -89 303 28 0 0 chr5 152136497 152136533 -47493617 + (ATG)n Simple_repeat Simple_repeat 2 37 0 241 319 7 89 chr5 152136549 152136633 -47493517 - MIR SINE MIR -1 261 190 1765 145 0 57 chr5 152136633 152136812 -47493338 - AluSx SINE Alu -13 299 144 2232 103 3 0 chr5 152136812 152137112 -47493038 - AluSx SINE Alu -10 302 2 1765 145 0 57 chr5 152137112 152137249 -47492901 - AluSx SINE Alu -168 144 1 241 319 7 89 chr5 152137249 152137299 -47492851 - MIR SINE MIR -72 190 138 695 143 9 0 chr5 152137302 152137407 -47492743 - U6 snRNA snRNA 0 107 2 1788 149 7 33 chr5 152137437 152137540 -47492610 + AluJb SINE Alu 1 105 -207 2830 84 0 0 chr5 152137540 152137895 -47492255 + THE1A LTR MaLR 1 355 0 12488 72 7 18 chr5 152137895 152138165 -47491985 + THE1A-int LTR MaLR 1 272 -1308 2242 122 0 0 chr5 152138165 152138477 -47491673 - AluSx SINE Alu 0 312 1 2153 82 21 0 chr5 152138477 152138756 -47491394 - AluY SINE Alu -17 294 9 2262 106 0 13 chr5 152138764 152139075 -47491075 - AluSc SINE Alu -2 307 1 12488 72 7 18 chr5 152139075 152140209 -47489941 + THE1A-int LTR MaLR 278 1423 -157 2081 120 3 0 chr5 152140209 152140521 -47489629 - AluSx SINE Alu 0 313 1 2224 122 3 0 chr5 152140521 152140824 -47489326 - AluSx SINE Alu -7 305 1 12488 72 7 18 chr5 152140824 152141003 -47489147 + THE1A-int LTR MaLR 1421 1580 0 2665 73 3 43 chr5 152141005 152141324 -47488826 + THE1A LTR MaLR 3 307 -48 2318 92 0 0 chr5 152141324 152141627 -47488523 - AluY SINE Alu -6 305 3 2665 73 3 43 chr5 152141627 152141675 -47488475 + THE1A LTR MaLR 307 355 0 1788 149 7 33 chr5 152141675 152141869 -47488281 + AluJb SINE Alu 105 294 -18 259 263 79 0 chr5 152141873 152141949 -47488201 - MIR SINE MIR -130 132 51 1731 158 42 0 chr5 152141967 152142252 -47487898 + AluJo SINE Alu 1 297 -15 2145 89 0 4 chr5 152142446 152142749 -47487401 - AluSg1 SINE Alu 0 302 1 2197 108 10 0 chr5 152142750 152143046 -47487104 - AluSq SINE Alu -14 299 1 392 280 153 0 chr5 152143065 152143222 -47486928 - MIR SINE MIR -75 187 7 303 235 0 0 chr5 152143436 152143504 -47486646 - MER117 DNA MER1_type -102 95 28 272 323 42 42 chr5 152143526 152143715 -47486435 - L2 LINE L2 -69 3203 3015 182 340 143 29 chr5 152143834 152144043 -47486107 - L2 LINE L2 -337 2977 2745 216 212 44 44 chr5 152144157 152144262 -47485888 - MIR SINE MIR -64 144 39 219 316 0 38 chr5 152144696 152144775 -47485375 + L3 LINE CR1 332 407 -1170 599 268 45 35 chr5 152145017 152145215 -47484935 - L2 LINE L2 -10 3303 3104 2055 124 30 0 chr5 152145220 152145518 -47484632 + AluSx SINE Alu 6 312 0 1149 129 12 0 chr5 152145518 152145689 -47484461 + AluJb SINE Alu 133 305 -7 622 231 22 8 chr5 152145928 152146062 -47484088 - MIR SINE MIR -77 185 50 2217 109 0 3 chr5 152146413 152146717 -47483433 - AluSg SINE Alu -7 303 1 2135 92 3 3 chr5 152146717 152147000 -47483150 - AluSq SINE Alu -22 291 9 1754 167 7 23 chr5 152147002 152147168 -47482982 - AluJb SINE Alu -11 301 134 2301 74 3 3 chr5 152147168 152147467 -47482683 - AluY SINE Alu -12 299 1 2267 80 3 0 chr5 152147470 152147769 -47482381 - AluY SINE Alu -11 300 1 1754 167 7 23 chr5 152147769 152147904 -47482246 - AluJb SINE Alu -180 132 1 312 386 61 0 chr5 152147908 152148071 -47482079 + MIR SINE MIR 46 218 -44 493 149 161 0 chr5 152148071 152148158 -47481992 + FRAM SINE Alu 36 136 -40 1429 159 100 0 chr5 152148165 152148416 -47481734 + AluJo SINE Alu 1 276 -36 2145 111 3 3 chr5 152148418 152148715 -47481435 - AluSx SINE Alu -15 297 1 2373 89 0 0 chr5 152148726 152149028 -47481122 - AluSx SINE Alu -10 302 1 726 192 8 0 chr5 152149360 152149485 -47480665 - FLAM_A SINE Alu -7 126 1 234 191 0 0 chr5 152149704 152149751 -47480399 + (CA)n Simple_repeat Simple_repeat 1 47 0 1393 148 75 88 chr5 152149934 152150067 -47480083 + AluJb SINE Alu 1 134 -178 1904 109 25 7 chr5 152150067 152150351 -47479799 + AluSg SINE Alu 20 308 -2 1393 148 75 88 chr5 152150351 152150522 -47479628 + AluJb SINE Alu 134 301 -11 294 330 105 45 chr5 152151270 152151470 -47478680 - L2 LINE L2 -35 3237 3026 717 149 10 144 chr5 152151487 152151562 -47478588 + MIR SINE MIR 78 161 -101 741 158 0 43 chr5 152151562 152151695 -47478455 + AluJo/FLAM SINE Alu 1 128 -169 2263 92 3 0 chr5 152151695 152152000 -47478150 - AluSx SINE Alu -6 306 1 717 149 10 144 chr5 152152005 152152137 -47478013 + MIR SINE MIR 161 257 -5 2192 96 0 0 chr5 152152156 152152460 -47477690 + AluSx SINE Alu 1 304 0 514 286 39 0 chr5 152152838 152153016 -47477134 - L2 LINE L2 -179 3093 2909 717 193 0 0 chr5 152154176 152154316 -47475834 - Charlie1a DNA MER1_type 0 1455 1316 1008 153 0 0 chr5 152154321 152154509 -47475641 - AluSg/x SINE Alu 0 319 132 1883 137 39 0 chr5 152154509 152154793 -47475357 - AluSx SINE Alu -17 295 1 1991 118 39 105 chr5 152154795 152154877 -47475273 - Charlie1a DNA MER1_type -1450 1311 1225 2319 110 0 0 chr5 152154877 152155187 -47474963 + AluSx SINE Alu 1 310 -2 1991 118 39 105 chr5 152155187 152155646 -47474504 - Charlie1a DNA MER1_type -1536 1225 806 2269 77 0 39 chr5 152155654 152155964 -47474186 + AluSg SINE Alu 1 298 -12 738 182 0 0 chr5 152155980 152156101 -47474049 + FLAM_A SINE Alu 20 140 -2 557 279 5 5 chr5 152156111 152156319 -47473831 - Charlie1a DNA MER1_type -639 816 609 696 231 8 0 chr5 152156347 152156477 -47473673 + FLAM_A SINE Alu 1 131 -2 1061 172 65 53 chr5 152156493 152156710 -47473440 - Charlie1a DNA MER1_type -2136 625 412 261 0 0 0 chr5 152156710 152156739 -47473411 + (TA)n Simple_repeat Simple_repeat 2 30 0 2136 92 14 0 chr5 152156740 152157021 -47473129 - AluSg SINE Alu -25 285 1 1061 172 65 53 chr5 152157021 152157063 -47473087 - Charlie1a DNA MER1_type -2348 413 361 657 193 204 0 chr5 152157076 152157252 -47472898 - Charlie1a DNA MER1_type -1236 219 8 473 293 136 15 chr5 152159027 152159225 -47470925 - MIR SINE MIR -5 257 36 285 278 14 0 chr5 152159508 152159580 -47470570 + MIR SINE MIR 80 152 -110 505 311 20 0 chr5 152161075 152161223 -47468927 - MIR SINE MIR -16 246 96 243 290 16 0 chr5 152161273 152161335 -47468815 - L2 LINE L2 0 3272 3210 210 103 0 0 chr5 152161518 152161547 -47468603 + MIR SINE MIR 117 145 -117 236 317 0 24 chr5 152161905 152162072 -47468078 + (TGAG)n Simple_repeat Simple_repeat 4 166 0 * 273 281 0 50 chr5 152161957 152162078 -47468072 + (TG)n Simple_repeat Simple_repeat 1 115 0 461 203 59 8 chr5 152163207 152163325 -47466825 + MIR SINE MIR 21 144 -118 240 177 97 32 chr5 152164226 152164288 -47465862 - MIR SINE MIR -67 141 76 190 267 56 78 chr5 152165371 152165461 -47464689 + MIR3 SINE MIR 88 175 -33 357 221 52 39 chr5 152166387 152166541 -47463609 + (TCTCTG)n Simple_repeat Simple_repeat 3 158 0 207 291 103 42 chr5 152168447 152168612 -47461538 + L2 LINE L2 2914 3088 -225 248 271 139 33 chr5 152168756 152168878 -47461272 - MIR SINE MIR -19 243 109 1681 163 20 14 chr5 152169016 152169136 -47461014 + AluJb SINE Alu 1 119 -193 242 0 61 0 chr5 152169136 152169169 -47460981 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1681 163 20 14 chr5 152169169 152169343 -47460807 + AluJb SINE Alu 119 297 -15 2369 78 3 3 chr5 152169346 152169655 -47460495 + AluY SINE Alu 1 309 -2 356 316 129 7 chr5 152170827 152170982 -47459168 + MIR SINE MIR 24 197 -65 1851 172 3 0 chr5 152171093 152171395 -47458755 - AluJb SINE Alu -9 303 1 201 342 8 8 chr5 152171736 152171856 -47458294 + (CA)n Simple_repeat Simple_repeat 2 121 0 340 276 0 24 chr5 152171932 152172055 -47458095 + (CA)n Simple_repeat Simple_repeat 1 120 0 256 337 0 22 chr5 152172911 152173000 -47457150 - MIR SINE MIR -73 189 103 2277 103 3 0 chr5 152173126 152173438 -47456712 - AluSq SINE Alu 0 313 1 339 135 0 13 chr5 152173488 152173586 -47456564 + AluJ SINE Alu 1 135 -167 1655 168 50 10 chr5 152173587 152173718 -47456432 + AluJb SINE Alu 1 125 -187 1822 144 16 22 chr5 152173718 152174031 -47456119 + AluJb SINE Alu 1 311 -1 1655 168 50 10 chr5 152174031 152174196 -47455954 + AluJb SINE Alu 125 309 -3 223 346 77 19 chr5 152174326 152174430 -47455720 - MIR SINE MIR -63 199 90 288 0 0 0 chr5 152174938 152174970 -47455180 + (TG)n Simple_repeat Simple_repeat 1 32 0 325 150 173 8 chr5 152175145 152175272 -47454878 - MER96B DNA MER1_type? -32 385 238 185 315 34 0 chr5 152175878 152175967 -47454183 - L2 LINE L2 -309 2963 2872 563 239 158 0 chr5 152176208 152176392 -47453758 - MIR SINE MIR -4 258 46 848 222 0 6 chr5 152177197 152177364 -47452786 + AluJ SINE Alu 137 302 0 331 281 11 0 chr5 152179235 152179324 -47450826 - MIR SINE MIR -76 132 43 622 307 29 0 chr5 152180426 152180655 -47449495 - MIR SINE MIR -7 255 20 331 316 68 8 chr5 152181217 152181334 -47448816 + MIR SINE MIR 68 191 -71 2242 122 3 0 chr5 152181334 152181645 -47448505 - AluSx SINE Alu 0 312 1 1057 174 14 19 chr5 152181654 152181861 -47448289 - AluJo SINE Alu -21 291 86 217 303 118 75 chr5 152182774 152183121 -47447029 + L2 LINE L2 2569 2930 -384 374 337 36 15 chr5 152183238 152183433 -47446717 + MIR SINE MIR 16 218 -44 266 296 40 72 chr5 152183477 152183629 -47446521 + L2 LINE L2 3126 3272 0 23 33 0 0 chr5 152183897 152183927 -47446223 + GC_rich Low_complexity Low_complexity 1 30 0 242 324 29 10 chr5 152185963 152186065 -47444085 - MIR3 SINE MIR -31 177 74 292 202 0 161 chr5 152186092 152186135 -47444015 + MIR SINE MIR 72 120 -138 1313 66 0 11 chr5 152186135 152186317 -47443833 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2210 61 4 7 chr5 152186318 152186596 -47443554 - AluY SINE Alu -34 277 1 2183 127 0 10 chr5 152186602 152186916 -47443234 - AluSx SINE Alu -1 311 1 292 202 0 161 chr5 152186916 152187012 -47443138 + MIR SINE MIR 125 196 -62 217 280 0 0 chr5 152187056 152187106 -47443044 - MIR SINE MIR -10 252 203 253 277 28 92 chr5 152187689 152187742 -47442408 + MIR SINE MIR 109 164 -98 2233 90 3 3 chr5 152187742 152188043 -47442107 + AluSp SINE Alu 1 301 -12 253 277 28 92 chr5 152188043 152188130 -47442020 + MIR SINE MIR 164 240 -22 505 328 125 13 chr5 152188228 152188603 -47441547 - L2 LINE L2 0 3272 2856 4567 196 40 61 chr5 152189152 152189586 -47440564 + MER45B DNA AcHobo 3 445 -1136 1865 93 4 36 chr5 152189586 152189864 -47440286 + AluSx SINE Alu 11 279 -33 204 67 0 0 chr5 152189866 152189896 -47440254 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 4567 196 40 61 chr5 152189896 152190517 -47439633 + MER45B DNA AcHobo 446 1038 -2 2364 46 0 0 chr5 152190670 152190978 -47439172 - AluY SINE Alu 0 309 2 349 336 37 0 chr5 152191562 152191696 -47438454 + MIR SINE MIR 95 233 -29 811 321 103 19 chr5 152191816 152192233 -47437917 + L2 LINE L2 2834 3285 -28 255 304 0 14 chr5 152192220 152192289 -47437861 - L2 LINE L2 -67 3205 3138 * 3442 155 36 42 chr5 152192322 152192559 -47437591 - L1MB3 LINE L1 0 6183 5946 1562 163 8 4 chr5 152192559 152192823 -47437327 - AluJo SINE Alu -8 304 40 3442 155 36 42 chr5 152192823 152193248 -47436902 - L1MB3 LINE L1 -237 5946 5525 562 184 20 10 chr5 152193326 152193424 -47436726 - FRAM SINE Alu -76 100 2 366 285 62 42 chr5 152193500 152193785 -47436365 - L2 LINE L2 -232 3081 2781 2324 88 0 3 chr5 152193785 152194091 -47436059 - AluSg SINE Alu -5 305 1 218 233 163 12 chr5 152194816 152194902 -47435248 - MIR SINE MIR -87 121 23 2068 131 16 3 chr5 152194966 152195271 -47434879 - AluSp SINE Alu -4 309 1 225 320 0 0 chr5 152195687 152195765 -47434385 - MIR SINE MIR -65 143 66 946 120 0 0 chr5 152195973 152196106 -47434044 - AluJb SINE Alu -14 298 166 630 323 127 24 chr5 152196117 152196535 -47433615 - L3 LINE CR1 -27 1550 1090 1867 164 3 0 chr5 152196906 152197210 -47432940 + AluJo SINE Alu 3 307 -5 941 242 27 42 chr5 152197699 152197951 -47432199 - L1ME4a LINE L1 -233 5888 5641 1801 148 26 19 chr5 152197951 152198261 -47431889 + AluJb SINE Alu 1 312 0 941 242 27 42 chr5 152198261 152198343 -47431807 - L1ME4a LINE L1 -480 5641 5559 21 0 0 0 chr5 152198416 152198437 -47431713 + AT_rich Low_complexity Low_complexity 1 21 0 920 98 8 0 chr5 152198437 152198570 -47431580 - L1PB1 LINE L1 0 6151 6018 246 293 39 74 chr5 152198589 152198818 -47431332 - L1MC4 LINE L1 -1 8041 7821 2371 205 56 5 chr5 152198853 152199443 -47430707 - L1ME2 LINE L1 -9 6155 5536 440 311 79 95 chr5 152199481 152199734 -47430416 - L3 LINE CR1 -513 1064 815 2206 122 0 0 chr5 152199734 152200046 -47430104 - AluSx SINE Alu 0 312 1 440 311 79 95 chr5 152200046 152200097 -47430053 - L3 LINE CR1 -762 815 765 731 220 57 17 chr5 152200152 152200329 -47429821 - MIR SINE MIR -66 196 13 373 364 34 87 chr5 152200318 152200634 -47429516 - L3 LINE CR1 -820 757 426 * 2342 95 0 0 chr5 152200634 152200938 -47429212 - AluY SINE Alu -7 304 1 2324 94 0 0 chr5 152200938 152201237 -47428913 - AluSx SINE Alu -13 299 1 373 364 34 87 chr5 152201237 152201389 -47428761 - L3 LINE CR1 -1149 428 313 224 309 0 0 chr5 152201413 152201468 -47428682 + L2 LINE L2 3247 3301 -12 2169 109 0 0 chr5 152201475 152201787 -47428363 - AluSq SINE Alu 0 312 1 2177 99 3 3 chr5 152201794 152202096 -47428054 - AluSx SINE Alu -10 302 1 2036 183 33 39 chr5 152202132 152202460 -47427690 - L1MB4 LINE L1 0 6180 5854 1809 132 14 24 chr5 152202460 152202749 -47427401 + AluJo SINE Alu 1 286 -26 2036 183 33 39 chr5 152202749 152202906 -47427244 - L1MB4 LINE L1 -326 5854 5698 712 253 64 88 chr5 152202957 152203245 -47426905 + L2 LINE L2 1823 2101 -1213 1991 120 17 0 chr5 152203245 152203537 -47426613 - AluJb SINE Alu -9 303 7 712 253 64 88 chr5 152203537 152203636 -47426514 + L2 LINE L2 2101 2201 -1113 1944 160 0 0 chr5 152203811 152204104 -47426046 + AluJo SINE Alu 2 294 -18 1716 156 0 11 chr5 152204108 152204391 -47425759 + AluJb SINE Alu 3 282 -30 204 40 0 0 chr5 152204401 152204426 -47425724 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 616 258 160 64 chr5 152204517 152204998 -47425152 + MLT1K LTR MaLR 38 564 -24 587 262 70 0 chr5 152205369 152205541 -47424609 + MIR SINE MIR 63 246 -16 26 0 0 0 chr5 152206167 152206193 -47423957 + GC_rich Low_complexity Low_complexity 1 26 0 195 314 66 50 chr5 152207016 152207137 -47423013 - L2 LINE L2 0 3313 3191 223 157 20 20 chr5 152207196 152207247 -47422903 + L2 LINE L2 3029 3079 -234 611 171 90 0 chr5 152207338 152207449 -47422701 + AluJb SINE Alu 190 310 -2 730 298 83 31 chr5 152207492 152207841 -47422309 - L2 LINE L2 -3 3310 2944 644 121 0 0 chr5 152208096 152208187 -47421963 + AluJ/FLAM SINE Alu 3 93 -219 1402 264 59 7 chr5 152208212 152208670 -47421480 - L2 LINE L2 -940 2374 1893 1969 127 13 38 chr5 152208718 152209034 -47421116 + AluSq SINE Alu 1 308 -5 1770 152 40 0 chr5 152209111 152209387 -47420763 + AluJb SINE Alu 7 293 -19 385 165 0 31 chr5 152209415 152209512 -47420638 + L1M4 LINE L1 3945 4038 -2108 414 161 103 0 chr5 152209512 152209599 -47420551 + AluJ/FRAM SINE Alu 217 312 0 612 283 6 25 chr5 152209605 152209764 -47420386 - MER91A DNA MER1_type -40 156 1 570 254 106 16 chr5 152209764 152209936 -47420214 - L2 LINE L2 -1408 1906 1718 339 33 49 33 chr5 152210654 152210715 -47419435 + (TTTC)n Simple_repeat Simple_repeat 1 62 0 * 884 140 11 17 chr5 152210700 152210879 -47419271 + CT-rich Low_complexity Low_complexity 3 180 0 2113 113 10 7 chr5 152210897 152211207 -47418943 - AluSq SINE Alu -2 311 1 248 264 56 76 chr5 152211315 152211463 -47418687 - MIR SINE MIR -65 143 35 326 360 108 7 chr5 152211732 152211871 -47418279 - MIR SINE MIR -3 259 107 401 233 192 0 chr5 152212190 152212310 -47417840 + MIR SINE MIR 84 226 -36 271 345 134 0 chr5 152212489 152212683 -47417467 - L2 LINE L2 -214 3058 2839 307 321 196 12 chr5 152215369 152215527 -47414623 - MIR SINE MIR -59 203 22 1196 255 123 37 chr5 152216251 152216332 -47413818 - L1MC4 LINE L1 -44 7998 7925 249 33 0 0 chr5 152216332 152216362 -47413788 + (TC)n Simple_repeat Simple_repeat 1 30 0 1196 255 123 37 chr5 152216362 152216872 -47413278 - L1MC4 LINE L1 -117 7925 7356 2834 238 105 109 chr5 152217833 152218110 -47412040 + L2 LINE L2 1047 1323 -1991 714 129 7 102 chr5 152218110 152218257 -47411893 - AluSq/x SINE Alu -179 133 1 2834 238 105 109 chr5 152218257 152218605 -47411545 + L2 LINE L2 1323 1671 -1643 2181 120 0 0 chr5 152218605 152218904 -47411246 + AluSx SINE Alu 1 299 -13 2834 238 105 109 chr5 152218904 152219593 -47410557 + L2 LINE L2 1671 2503 -811 263 306 0 112 chr5 152221118 152221334 -47408816 - MIR SINE MIR -40 222 40 211 222 19 0 chr5 152221837 152221891 -47408259 + (TG)n Simple_repeat Simple_repeat 1 55 0 864 198 0 0 chr5 152222572 152222817 -47407333 + (TG)n Simple_repeat Simple_repeat 1 245 0 283 277 117 0 chr5 152223023 152223117 -47407033 + MIR SINE MIR 56 160 -102 1037 288 169 7 chr5 152223118 152223692 -47406458 - L2 LINE L2 -2 3311 2648 287 303 98 8 chr5 152224141 152224273 -47405877 + MIR3 SINE MIR 48 191 -17 269 279 39 58 chr5 152225098 152225202 -47404948 + L3b LINE CR1 1281 1382 -201 306 367 8 8 chr5 152225578 152225706 -47404444 + MER5A DNA MER1_type 56 183 -6 190 108 81 0 chr5 152226139 152226176 -47403974 - MIR SINE MIR -60 148 109 181 246 15 31 chr5 152226964 152227029 -47403121 - L3 LINE CR1 -21 1556 1493 225 338 0 0 chr5 152227575 152227643 -47402507 + MIR SINE MIR 80 147 -115 275 289 56 11 chr5 152227966 152228056 -47402094 - L3b LINE CR1 -193 1390 1297 257 262 119 0 chr5 152228695 152228779 -47401371 + L2 LINE L2 3139 3232 -40 315 299 6 28 chr5 152229261 152229312 -47400838 + CT-rich Low_complexity Low_complexity 2 53 -121 2293 85 3 0 chr5 152229312 152229607 -47400543 - AluY SINE Alu -15 296 1 315 299 6 28 chr5 152229607 152229732 -47400418 + CT-rich Low_complexity Low_complexity 53 174 0 865 233 142 19 chr5 152229787 152230096 -47400054 - L2 LINE L2 -35 3278 2932 189 273 148 0 chr5 152230382 152230470 -47399680 - L2 LINE L2 -270 3043 2943 314 291 47 0 chr5 152230818 152230904 -47399246 + L2 LINE L2 3224 3313 0 405 323 153 16 chr5 152233025 152233390 -47396760 + L2 LINE L2 1583 1997 -1317 1244 257 52 50 chr5 152233402 152233422 -47396728 - L1MC5 LINE L1 -30 7931 7913 2291 90 3 7 chr5 152233422 152233732 -47396418 + AluSq SINE Alu 1 309 -4 1244 257 52 50 chr5 152233732 152234350 -47395800 - L1MC5 LINE L1 -48 7913 7292 314 286 187 17 chr5 152234355 152234596 -47395554 + L2 LINE L2 1982 2263 -1051 385 315 155 9 chr5 152234817 152235036 -47395114 + L2 LINE L2 2817 3067 -205 296 263 0 8 chr5 152235310 152235387 -47394763 + MIR SINE MIR 40 113 -95 485 323 65 0 chr5 152235529 152235715 -47394435 - MIR SINE MIR -16 246 49 1067 287 52 79 chr5 152235908 152235973 -47394177 - L1ME LINE L1 -5002 1203 1138 1831 167 0 3 chr5 152235973 152236296 -47393854 + AluJb SINE Alu 1 312 0 1067 287 52 79 chr5 152236296 152236397 -47393753 - L1ME LINE L1 -5067 1138 1036 1008 39 86 0 chr5 152236397 152236525 -47393625 + MER85 DNA T2_type 1 139 0 1067 287 52 79 chr5 152236525 152237036 -47393114 - L1ME LINE L1 -5169 1036 569 2247 110 0 0 chr5 152238643 152238943 -47391207 - AluSx SINE Alu -12 300 1 204 250 0 0 chr5 152239837 152239877 -47390273 + L2 LINE L2 3268 3307 -6 559 284 90 5 chr5 152241249 152241450 -47388700 + MIR SINE MIR 20 237 -25 1639 68 0 0 chr5 152242096 152242298 -47387852 - AluY SINE Alu -10 301 109 334 293 130 0 chr5 152242314 152242437 -47387713 + MIR SINE MIR 4 142 -120 199 293 141 0 chr5 152242921 152243020 -47387130 - L2 LINE L2 -257 3056 2944 935 152 5 27 chr5 152243020 152243204 -47386946 - L1M4 LINE L1 -432 5742 5563 946 279 164 41 chr5 152243215 152244336 -47385814 - L2 LINE L2 -702 2612 1354 239 302 111 48 chr5 152244342 152244594 -47385556 - MLT1L LTR MaLR -5 610 343 255 207 198 69 chr5 152244787 152244903 -47385247 - MLT1K LTR MaLR -375 213 83 634 304 157 17 chr5 152244940 152245277 -47384873 - L2 LINE L2 -1964 1350 927 1965 125 85 23 chr5 152245277 152245630 -47384520 - THE1C LTR MaLR 0 375 1 634 304 157 17 chr5 152245630 152245763 -47384387 - L2 LINE L2 -2387 927 814 513 250 83 5 chr5 152246852 152247056 -47383094 - L1MEc LINE L1 -3352 2863 2644 4807 154 16 44 chr5 152247069 152248053 -47382097 - L1MB5 LINE L1 -36 6138 5181 1953 146 16 16 chr5 152248053 152248229 -47381921 - AluJo SINE Alu -2 310 132 982 71 59 0 chr5 152248229 152248398 -47381752 + CT-rich Low_complexity Low_complexity 2 180 0 1953 146 16 16 chr5 152248398 152248529 -47381621 - AluJo SINE Alu -179 133 3 610 206 0 0 chr5 152248549 152248690 -47381460 - L1MB5 LINE L1 -2647 3499 3359 1248 256 67 11 chr5 152248699 152249260 -47380890 - L1MEc LINE L1 -3558 2657 2086 220 316 0 0 chr5 152249972 152250048 -47380102 + (CATATA)n Simple_repeat Simple_repeat 5 80 0 638 263 95 22 chr5 152250923 152251155 -47378995 + MIR SINE MIR 12 260 -2 189 211 0 0 chr5 152251782 152251834 -47378316 + (CCA)n Simple_repeat Simple_repeat 3 54 0 1847 154 0 47 chr5 152251993 152252312 -47377838 - AluJo SINE Alu -8 304 1 395 310 78 0 chr5 152252498 152252627 -47377523 - L2 LINE L2 0 3272 3134 186 209 0 0 chr5 152252649 152252692 -47377458 + (CCCA)n Simple_repeat Simple_repeat 2 44 0 419 191 45 9 chr5 152254818 152254928 -47375222 + MER5A DNA MER1_type 66 179 -10 427 305 0 64 chr5 152257249 152257411 -47372739 - L1MC/D LINE L1 -2220 5588 5438 2411 94 0 3 chr5 152257411 152257710 -47372440 - AluSx SINE Alu -14 298 1 427 305 0 64 chr5 152257710 152257734 -47372416 - L1MC/D LINE L1 -2370 5438 5414 5156 145 41 12 chr5 152257741 152258083 -47372067 - L1MB2 LINE L1 -3 6168 5837 846 100 69 0 chr5 152258083 152258213 -47371937 + MER85 DNA T2_type 1 139 0 5156 145 41 12 chr5 152258213 152258932 -47371218 - L1MB2 LINE L1 -334 5837 5078 351 266 54 12 chr5 152258934 152259112 -47371038 - L1MC/D LINE L1 -777 5369 5189 601 84 17 25 chr5 152261281 152261400 -47368750 - Charlie7 DNA MER1_type -61 2551 2434 294 150 17 17 chr5 152261387 152261447 -47368703 - Charlie7 DNA MER1_type -2507 105 46 * 250 287 37 19 chr5 152261621 152261729 -47368421 - L2 LINE L2 -18 3254 3145 316 239 225 36 chr5 152262752 152262912 -47367238 - MIR SINE MIR -63 145 3 261 0 0 0 chr5 152262956 152262985 -47367165 + (CA)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr5 152263747 152263769 -47366381 + AT_rich Low_complexity Low_complexity 1 22 0 397 308 44 0 chr5 152264786 152264945 -47365205 - L1ME4a LINE L1 -286 5835 5670 693 248 78 30 chr5 152264969 152265199 -47364951 + MIR SINE MIR 22 262 0 1299 237 52 20 chr5 152265203 152265610 -47364540 - L1ME4a LINE L1 -443 5678 5255 285 146 0 0 chr5 152265680 152265728 -47364422 + (T)n Simple_repeat Simple_repeat 1 48 0 264 292 56 35 chr5 152265885 152266029 -47364121 + MER5B DNA MER1_type 4 150 -28 418 149 0 69 chr5 152266029 152266116 -47364034 - L1ME3A LINE L1 -10 6160 6080 282 193 0 0 chr5 152268792 152268849 -47361301 + (CA)n Simple_repeat Simple_repeat 1 57 0 777 267 15 0 chr5 152269412 152269607 -47360543 - MIR SINE MIR -12 250 53 226 180 20 20 chr5 152270234 152270284 -47359866 + L1MCc LINE L1 803 852 -5571 254 182 91 0 chr5 152270374 152270440 -47359710 - MIR SINE MIR -120 142 71 220 286 36 45 chr5 152270484 152270596 -47359554 + MIR3 SINE MIR 3 113 -95 230 310 11 11 chr5 152272028 152272115 -47358035 + L1ME4a LINE L1 5956 6042 -79 442 350 112 0 chr5 152272698 152272984 -47357166 + L2 LINE L2 2463 2780 -534 1737 148 25 16 chr5 152273402 152273720 -47356430 + L1MB3 LINE L1 5863 6183 0 4261 166 67 12 chr5 152273724 152274536 -47355614 + L1MB8 LINE L1 5317 6172 -6 4814 196 13 35 chr5 152274539 152275947 -47354203 - L1ME LINE L1 -629 5541 4201 * 6510 135 48 8 chr5 152275937 152277440 -47352710 + L1MA5A LINE L1 4594 6244 -53 272 208 10 52 chr5 152277438 152277534 -47352616 - L1ME LINE L1 -1907 4239 4148 * 10790 180 51 26 chr5 152277581 152278166 -47351984 + Cheshire DNA MER1_type 94 663 -1757 2325 99 0 10 chr5 152278166 152278469 -47351681 + AluSg SINE Alu 1 300 -10 1852 174 7 0 chr5 152278473 152278767 -47351383 + AluSx SINE Alu 1 296 -16 10790 180 51 26 chr5 152278767 152280440 -47349710 + Cheshire DNA MER1_type 665 2414 -6 350 321 21 77 chr5 152280462 152280749 -47349401 + L2 LINE L2 2837 3107 -165 459 266 71 6 chr5 152280888 152281057 -47349093 - L1MC4a LINE L1 -1813 5995 5816 3064 196 96 26 chr5 152281061 152282037 -47348113 - L1ME1 LINE L1 -8 6158 5086 2075 154 3 0 chr5 152282038 152282349 -47347801 + AluSx SINE Alu 1 312 0 1573 244 56 59 chr5 152282470 152282556 -47347594 + L1M4 LINE L1 2128 2213 -3933 2271 122 0 0 chr5 152282556 152282860 -47347290 + AluSx SINE Alu 1 304 -8 1573 244 56 59 chr5 152282860 152283480 -47346670 + L1M4 LINE L1 2213 2834 -3312 1955 146 20 7 chr5 152283480 152283782 -47346368 + AluJb SINE Alu 1 306 -6 1573 244 56 59 chr5 152283782 152283804 -47346346 + L1M4 LINE L1 2834 2855 -3291 * 5111 226 79 18 chr5 152283798 152284445 -47345705 + L1MEc LINE L1 1816 2422 -3793 2298 91 0 19 chr5 152284445 152284754 -47345396 + AluSx SINE Alu 1 303 -9 5111 226 79 18 chr5 152284754 152285240 -47344910 + L1MEc LINE L1 2422 2877 -3338 2199 138 3 0 chr5 152285240 152285551 -47344599 + AluSx SINE Alu 1 312 0 5111 226 79 18 chr5 152285551 152286335 -47343815 + L1MEc LINE L1 2877 3837 -2378 24 0 0 0 chr5 152286341 152286365 -47343785 + AT_rich Low_complexity Low_complexity 1 24 0 1135 183 9 9 chr5 152286376 152286606 -47343544 - AluSg SINE Alu -24 286 57 2326 105 0 3 chr5 152287250 152287556 -47342594 - AluSg1 SINE Alu -4 305 1 257 304 70 9 chr5 152288241 152288356 -47341794 - L2 LINE L2 -962 2352 2231 1856 147 45 0 chr5 152288363 152288699 -47341451 + AluSp SINE Alu 9 357 0 1580 288 118 9 chr5 152288699 152289469 -47340681 - L2 LINE L2 -1067 2247 1394 2684 122 11 47 chr5 152289589 152290058 -47340092 - Tigger2 DNA MER2_type 0 2718 2267 431 132 0 15 chr5 152290041 152290109 -47340041 - Tigger2 DNA MER2_type -2649 69 3 * 564 202 192 120 chr5 152290111 152290403 -47339747 - MLT1G1 LTR MaLR -31 524 212 948 199 5 38 chr5 152291428 152291639 -47338511 + MER3 DNA MER1_type 2 205 -4 562 220 0 64 chr5 152291832 152292005 -47338145 + L2 LINE L2 3152 3313 0 180 0 0 0 chr5 152292061 152292081 -47338069 + (TG)n Simple_repeat Simple_repeat 1 20 0 264 77 0 0 chr5 152292081 152292120 -47338030 + (GA)n Simple_repeat Simple_repeat 2 40 0 1044 209 47 16 chr5 152292229 152292482 -47337668 - MIR SINE MIR 0 262 2 566 318 59 23 chr5 152293027 152293479 -47336671 + LTR33 LTR ERVL 24 521 0 1393 283 79 12 chr5 152294071 152294650 -47335500 + L2 LINE L2 1457 2074 -1240 1118 152 119 45 chr5 152294668 152294937 -47335213 + MER33 DNA MER1_type 36 324 0 1679 294 60 52 chr5 152294946 152295856 -47334294 + L2 LINE L2 2154 3075 -238 2015 120 10 20 chr5 152295856 152296155 -47333995 - AluSx SINE Alu -16 296 1 1679 294 60 52 chr5 152296155 152296390 -47333760 + L2 LINE L2 3075 3307 -6 381 22 0 0 chr5 152296704 152296750 -47333400 + (TG)n Simple_repeat Simple_repeat 2 47 0 184 308 26 51 chr5 152296836 152296914 -47333236 + L2 LINE L2 3197 3272 0 741 240 28 37 chr5 152297832 152298049 -47332101 - MIR SINE MIR -31 231 17 329 202 22 22 chr5 152298052 152298141 -47332009 - MIR SINE MIR -26 236 148 214 257 198 10 chr5 152298253 152298354 -47331796 + MIR SINE MIR 22 141 -121 2250 95 0 0 chr5 152298401 152298707 -47331443 + AluSg SINE Alu 1 306 0 451 291 76 12 chr5 152298774 152298946 -47331204 + MIR3 SINE MIR 19 201 -7 243 174 0 72 chr5 152299539 152299608 -47330542 + MIR SINE MIR 78 141 -121 1759 115 104 0 chr5 152299714 152299993 -47330157 + AluSx SINE Alu 1 308 -4 785 164 0 8 chr5 152300467 152300601 -47329549 - FLAM_C SINE Alu 0 133 1 270 121 52 35 chr5 152301137 152301195 -47328955 - L1MC4a LINE L1 -1886 5922 5864 1459 108 67 147 chr5 152301251 152301565 -47328585 + AluJo SINE Alu 4 292 -20 2222 114 13 0 chr5 152301571 152301870 -47328280 + AluSx SINE Alu 3 305 -7 2355 88 0 3 chr5 152301872 152302169 -47327981 + AluSp SINE Alu 1 296 -17 848 284 8 11 chr5 152302366 152302634 -47327516 + AluSx SINE Alu 22 288 -24 270 73 0 0 chr5 152302676 152302717 -47327433 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 7489 180 70 143 chr5 152302717 152302853 -47327297 - L1MEc LINE L1 -1053 5162 5018 959 45 0 56 chr5 152302853 152303031 -47327119 + (TTCC)n Simple_repeat Simple_repeat 2 169 0 7489 180 70 143 chr5 152303031 152303119 -47327031 - L1MEc LINE L1 -1197 5018 4925 261 0 0 0 chr5 152303119 152303148 -47327002 + (TC)n Simple_repeat Simple_repeat 2 30 0 7489 180 70 143 chr5 152303148 152303342 -47326808 - L1MEc LINE L1 -1290 4925 4718 1631 167 31 31 chr5 152303342 152303636 -47326514 + AluJo SINE Alu 1 294 -18 7489 180 70 143 chr5 152303636 152303898 -47326252 - L1MEc LINE L1 -1497 4718 4438 977 173 0 6 chr5 152303898 152304066 -47326084 - FRAM SINE Alu -8 168 2 7489 180 70 143 chr5 152304066 152304897 -47325253 - L1MEc LINE L1 -1777 4438 3548 2237 111 0 0 chr5 152304897 152305185 -47324965 + AluSx SINE Alu 1 288 -24 7489 180 70 143 chr5 152305185 152306010 -47324140 - L1MEc LINE L1 -2667 3548 2664 2242 132 3 0 chr5 152306010 152306321 -47323829 - AluSx SINE Alu 0 312 1 7489 180 70 143 chr5 152306321 152306807 -47323343 - L1MEc LINE L1 -3551 2664 2510 2314 87 0 19 chr5 152306807 152307116 -47323034 - AluSx SINE Alu -9 303 1 7489 180 70 143 chr5 152307116 152307764 -47322386 - L1MEc LINE L1 -3705 2510 1816 1638 244 55 58 chr5 152307758 152307780 -47322370 - L1M3d LINE L1 -3291 2924 2903 * 1984 142 20 7 chr5 152307780 152308082 -47322068 - AluJb SINE Alu -6 306 1 1638 244 55 58 chr5 152308082 152308702 -47321448 - L1M3d LINE L1 -3312 2903 2282 2317 112 0 0 chr5 152308702 152309006 -47321144 - AluSx SINE Alu -8 304 1 1638 244 55 58 chr5 152309006 152309092 -47321058 - L1M3d LINE L1 -3933 2282 2197 23 0 0 0 chr5 152309092 152309115 -47321035 + AT_rich Low_complexity Low_complexity 1 23 0 3654 198 37 25 chr5 152309252 152309736 -47320414 - L1MA9 LINE L1 -38 6274 5773 306 0 0 0 chr5 152309736 152309770 -47320380 + (CA)n Simple_repeat Simple_repeat 2 35 0 3654 198 37 25 chr5 152309770 152310143 -47320007 - L1MA9 LINE L1 -539 5773 5406 507 231 137 57 chr5 152310159 152310445 -47319705 - L1M3d LINE L1 -4742 1394 849 558 283 35 58 chr5 152310781 152311007 -47319143 - MIR SINE MIR -17 245 25 2109 92 0 0 chr5 152314205 152314465 -47315685 - AluSp SINE Alu -8 305 46 255 316 6 71 chr5 152318371 152318539 -47311611 - MIR3 SINE MIR -13 195 39 7172 164 15 25 chr5 152318703 152319893 -47310257 - L1MC1 LINE L1 0 6333 5177 1932 141 0 35 chr5 152319893 152320212 -47309938 - AluJo SINE Alu -4 308 1 7172 164 15 25 chr5 152320212 152321097 -47309053 - L1MC1 LINE L1 -1156 5177 4285 270 0 0 0 chr5 152321209 152321239 -47308911 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 192 106 0 64 chr5 152321672 152321719 -47308431 - MIR SINE MIR -43 219 176 181 228 13 63 chr5 152323408 152323487 -47306663 + MIR SINE MIR 92 166 -96 1782 168 23 107 chr5 152323857 152324440 -47305710 + L1MB8 LINE L1 4896 5440 -738 2148 149 0 0 chr5 152324440 152324748 -47305402 + AluJb SINE Alu 1 308 -4 607 32 0 75 chr5 152324760 152324853 -47305297 + L1MB8 LINE L1 6093 6178 0 4134 159 13 28 chr5 152324853 152325611 -47304539 + L1MB8 LINE L1 5428 6177 -1 1843 144 20 23 chr5 152327815 152328121 -47302029 - AluJb SINE Alu -7 305 1 241 271 178 0 chr5 152328225 152328332 -47301818 + L2 LINE L2 3159 3284 -29 280 388 18 18 chr5 152329095 152329265 -47300885 - MIR3 SINE MIR -26 182 13 270 125 0 0 chr5 152329613 152329661 -47300489 + (GGCTG)n Simple_repeat Simple_repeat 1 48 0 359 244 100 25 chr5 152330673 152330833 -47299317 - MIR3 SINE MIR -34 174 3 781 189 27 22 chr5 152333329 152333514 -47296636 + MIR SINE MIR 14 199 -63 535 323 20 20 chr5 152333837 152334088 -47296062 + MIR SINE MIR 2 252 -10 693 200 0 62 chr5 152337776 152337936 -47292214 + MER5A DNA MER1_type 40 189 0 249 282 190 12 chr5 152338367 152338530 -47291620 - L2 LINE L2 -518 2796 2605 300 179 75 0 chr5 152338684 152338751 -47291399 - MIR3 SINE MIR -34 174 103 318 316 88 6 chr5 152338864 152339035 -47291115 + L2 LINE L2 2883 3067 -205 592 261 72 27 chr5 152340060 152340282 -47289868 - MIR SINE MIR 0 262 31 187 432 0 0 chr5 152340783 152340894 -47289256 - L2 LINE L2 -902 2412 2302 346 312 22 29 chr5 152341773 152341911 -47288239 - MIR3 SINE MIR -68 140 4 1590 137 0 13 chr5 152342443 152342677 -47287473 - AluSx SINE Alu -81 231 1 297 202 36 24 chr5 152342790 152342874 -47287276 - MIR SINE MIR 0 262 178 * 610 284 48 75 chr5 152342856 152343190 -47286960 + L2 LINE L2 2980 3304 -9 449 274 76 13 chr5 152343208 152343365 -47286785 - MIR SINE MIR -86 176 10 218 241 129 26 chr5 152343400 152343516 -47286634 + MIR3 SINE MIR 78 205 -3 306 366 22 15 chr5 152343618 152343752 -47286398 - L2 LINE L2 -2 3270 3136 582 274 132 48 chr5 152343893 152344527 -47285623 - L2 LINE L2 -235 3037 2320 243 0 0 0 chr5 152344741 152344768 -47285382 + (TG)n Simple_repeat Simple_repeat 2 28 0 212 0 36 0 chr5 152344831 152344859 -47285291 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 195 42 0 0 chr5 152345610 152345634 -47284516 + (CGCTG)n Simple_repeat Simple_repeat 3 26 0 624 135 0 0 chr5 152345862 152345973 -47284177 + (CAG)n Simple_repeat Simple_repeat 3 113 0 198 0 0 0 chr5 152347191 152347213 -47282937 + (T)n Simple_repeat Simple_repeat 1 22 0 325 267 83 33 chr5 152350733 152350853 -47279297 - L1MC4a LINE L1 -1609 6199 6074 2472 79 0 0 chr5 152350933 152351237 -47278913 - AluSg SINE Alu -6 304 1 907 152 0 0 chr5 152353800 152353925 -47276225 - AluJb SINE Alu -187 125 1 1336 215 26 64 chr5 152354016 152354513 -47275637 - L1M4 LINE L1 -1669 4477 4000 513 261 143 48 chr5 152354547 152354605 -47275545 + MIR SINE MIR 9 60 -202 2147 116 7 13 chr5 152354605 152354907 -47275243 + AluY SINE Alu 1 300 -11 513 261 143 48 chr5 152354907 152355078 -47275072 + MIR SINE MIR 60 260 -2 28 0 0 0 chr5 152355793 152355821 -47274329 + AT_rich Low_complexity Low_complexity 1 28 0 290 298 124 0 chr5 152355858 152355979 -47274171 - MIR SINE MIR -18 244 109 21 0 0 0 chr5 152357370 152357391 -47272759 + AT_rich Low_complexity Low_complexity 1 21 0 1098 75 0 0 chr5 152359181 152359315 -47270835 - AluSg/x SINE Alu 0 310 177 775 282 5 10 chr5 152359333 152359542 -47270608 + MIR SINE MIR 55 262 0 242 224 0 17 chr5 152360858 152360916 -47269234 + L1MC/D LINE L1 5695 5751 -2057 217 263 70 0 chr5 152361220 152361277 -47268873 + L2 LINE L2 3235 3295 -18 272 396 20 7 chr5 152361653 152361802 -47268348 + L3 LINE CR1 1244 1394 -183 419 101 0 0 chr5 152362259 152362328 -47267822 - Charlie5 DNA MER1_type -27 2585 2517 302 372 26 16 chr5 152362346 152362537 -47267613 + L2 LINE L2 2765 2957 -357 223 115 0 77 chr5 152362627 152362679 -47267471 + (TGAA)n Simple_repeat Simple_repeat 4 51 0 401 181 0 24 chr5 152363289 152363372 -47266778 + L1ME3A LINE L1 6080 6160 -10 301 326 42 21 chr5 152363376 152363520 -47266630 - MER5B DNA MER1_type -28 150 4 180 489 0 0 chr5 152363687 152363777 -47266373 + A-rich Low_complexity Low_complexity 1 90 0 1225 251 66 18 chr5 152363860 152364254 -47265896 + L1ME4a LINE L1 5266 5678 -443 737 252 78 30 chr5 152364258 152364488 -47265662 - MIR SINE MIR 0 262 22 403 308 44 0 chr5 152364512 152364671 -47265479 + L1ME4a LINE L1 5670 5835 -286 209 203 250 0 chr5 152365230 152365294 -47264856 + MIR SINE MIR 183 262 0 307 295 42 0 chr5 152365350 152365445 -47264705 + L1ME4a LINE L1 6006 6104 -17 379 277 0 0 chr5 152365822 152365916 -47264234 + MIR SINE MIR 44 137 -71 216 0 0 0 chr5 152366079 152366103 -47264047 + (TG)n Simple_repeat Simple_repeat 2 25 0 458 264 128 5 chr5 152366299 152366504 -47263646 + MIR SINE MIR 24 249 -13 393 242 58 33 chr5 152369410 152369530 -47260620 - L2 LINE L2 0 3313 3191 180 239 43 0 chr5 152369690 152369736 -47260414 - L2 LINE L2 -2 3311 3264 248 301 88 7 chr5 152369828 152369964 -47260186 + L2 LINE L2 2917 3063 -209 290 270 0 0 chr5 152372492 152372566 -47257584 + MIR SINE MIR 66 139 -69 328 182 30 0 chr5 152372616 152372682 -47257468 + L2 LINE L2 3205 3272 0 232 322 11 0 chr5 152375109 152375185 -47254965 - MIR SINE MIR -66 142 62 352 303 71 0 chr5 152375213 152375312 -47254838 + L2 LINE L2 3151 3256 -16 510 256 121 109 chr5 152375525 152376095 -47254055 - MLT1K LTR MaLR -2 586 10 483 264 162 0 chr5 152376318 152376485 -47253665 + MIR3 SINE MIR 8 201 -7 351 0 0 0 chr5 152377256 152377295 -47252855 + (CA)n Simple_repeat Simple_repeat 2 40 0 186 250 0 62 chr5 152377476 152377540 -47252610 - L2 LINE L2 -221 3051 2992 3784 130 66 33 chr5 152377709 152378432 -47251718 - L1MB7 LINE L1 0 6184 5438 724 134 0 17 chr5 152378447 152378566 -47251584 - FLAM_C SINE Alu -14 129 13 240 83 0 0 chr5 152378579 152378615 -47251535 - L1MB7 LINE L1 -736 5442 5407 690 207 20 27 chr5 152378758 152378908 -47251242 - L2 LINE L2 0 3313 3165 2010 106 0 4 chr5 152378911 152379167 -47250983 + AluSc SINE Alu 1 255 -54 1064 298 122 19 chr5 152379400 152379981 -47250169 - L2 LINE L2 -376 2938 2298 210 242 0 0 chr5 152382868 152382934 -47247216 + CT-rich Low_complexity Low_complexity 1 66 0 612 27 0 0 chr5 152386437 152386511 -47243639 + (CA)n Simple_repeat Simple_repeat 1 74 0 314 101 38 13 chr5 152388835 152388914 -47241236 + T-rich Low_complexity Low_complexity 2 82 0 210 37 0 0 chr5 152389490 152389517 -47240633 + (TG)n Simple_repeat Simple_repeat 1 27 0 213 213 0 0 chr5 152389869 152389916 -47240234 + A-rich Low_complexity Low_complexity 1 47 0 487 297 80 14 chr5 152390981 152391193 -47238957 + MIR SINE MIR 3 228 -34 222 401 0 0 chr5 152391465 152391607 -47238543 + (CA)n Simple_repeat Simple_repeat 1 142 0 342 266 28 9 chr5 152392199 152392308 -47237842 + MIR SINE MIR 25 135 -73 217 176 55 99 chr5 152393228 152393319 -47236831 - MER5B DNA MER1_type -16 162 76 227 298 0 0 chr5 152394267 152394344 -47235806 + CT-rich Low_complexity Low_complexity 4 131 0 1109 316 50 33 chr5 152395727 152396584 -47233566 - L2 LINE L2 -88 3225 2342 438 264 96 36 chr5 152396651 152396901 -47233249 + L1MC/D LINE L1 5323 5587 -2221 509 281 166 20 chr5 152396905 152397314 -47232836 - L2 LINE L2 -1044 2270 1802 268 280 20 0 chr5 152397383 152397483 -47232667 + (TG)n Simple_repeat Simple_repeat 1 102 0 351 259 237 7 chr5 152398822 152398961 -47231189 + MIR SINE MIR 13 183 -79 196 286 71 0 chr5 152399839 152399895 -47230255 - L2 LINE L2 0 3272 3213 468 358 26 0 chr5 152399949 152400142 -47230008 - L2 LINE L2 -198 3074 2877 1795 84 57 102 chr5 152400227 152400598 -47229552 - L1MA2 LINE L1 0 6304 5951 185 286 18 0 chr5 152400598 152400654 -47229496 - L2 LINE L2 -565 2749 2693 409 308 72 26 chr5 152400715 152400910 -47229240 + L2 LINE L2 3108 3311 -2 443 288 89 7 chr5 152400930 152401076 -47229074 - MIR SINE MIR -40 222 65 331 287 22 11 chr5 152402822 152402928 -47227222 - MIR SINE MIR -62 146 43 404 234 8 62 chr5 152402943 152403038 -47227112 + MER94 DNA DNA 5 93 -41 2232 107 7 7 chr5 152403038 152403346 -47226804 + AluSx SINE Alu 1 308 -4 404 234 8 62 chr5 152403346 152403378 -47226772 + MER94 DNA DNA 93 125 -9 186 242 66 77 chr5 152403772 152403863 -47226287 - L2 LINE L2 -30 3242 3153 394 327 103 23 chr5 152403952 152404166 -47225984 + MIR SINE MIR 29 259 -3 212 344 30 23 chr5 152404911 152405042 -47225108 + L3 LINE CR1 1348 1479 -98 226 299 0 15 chr5 152405053 152405120 -47225030 + MIR SINE MIR 23 88 -174 486 194 105 16 chr5 152405957 152406081 -47224069 + MIR SINE MIR 128 262 0 572 329 58 64 chr5 152406198 152406648 -47223502 - L2 LINE L2 0 3272 2826 231 184 0 0 chr5 152408439 152408477 -47221673 - L3b LINE CR1 -268 1315 1278 396 0 0 0 chr5 152408498 152408542 -47221608 + (TG)n Simple_repeat Simple_repeat 1 44 0 233 353 58 23 chr5 152408594 152408767 -47221383 - MIR3 SINE MIR -27 181 3 343 230 79 40 chr5 152410034 152410160 -47219990 - MIR3 SINE MIR -9 199 69 2313 106 0 22 chr5 152410383 152410556 -47219594 - AluSx SINE Alu -7 305 130 207 0 0 0 chr5 152410556 152410579 -47219571 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2257 95 3 0 chr5 152410579 152410864 -47219286 - AluSp SINE Alu -27 286 1 2313 106 0 22 chr5 152410864 152411001 -47219149 - AluSx SINE Alu -180 132 1 563 253 37 31 chr5 152411389 152411421 -47218729 + MIR SINE MIR 3 33 -229 2172 129 7 0 chr5 152411421 152411724 -47218426 + AluSx SINE Alu 1 305 -7 563 253 37 31 chr5 152411724 152411853 -47218297 + MIR SINE MIR 33 165 -97 231 376 0 0 chr5 152413884 152413977 -47216173 - MIR SINE MIR -109 153 61 516 261 236 0 chr5 152414741 152414940 -47215210 - MIR SINE MIR -4 258 13 243 133 0 0 chr5 152415527 152415572 -47214578 + (CA)n Simple_repeat Simple_repeat 1 45 0 676 259 21 5 chr5 152417124 152417317 -47212833 + L2 LINE L2 3118 3313 0 296 362 45 70 chr5 152417454 152417924 -47212226 - L2 LINE L2 0 3272 2815 2099 97 47 4 chr5 152418871 152419149 -47211001 + AluSc SINE Alu 1 290 -19 432 0 0 0 chr5 152419154 152419202 -47210948 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 689 335 40 7 chr5 152420471 152420743 -47209407 + L3 LINE CR1 1230 1510 -67 220 186 0 0 chr5 152421147 152421190 -47208960 - MIR SINE MIR -26 236 194 309 366 86 30 chr5 152421211 152421479 -47208671 + L3b LINE CR1 1221 1503 -80 1079 305 103 76 chr5 152422772 152423633 -47206517 + L1ME4a LINE L1 4300 5189 -957 2345 97 3 0 chr5 152423633 152423922 -47206228 + AluSx SINE Alu 3 292 -20 1079 305 103 76 chr5 152423922 152423989 -47206161 + L1ME4a LINE L1 5189 5253 -893 628 290 80 17 chr5 152423990 152424498 -47205652 + L1ME4a LINE L1 5255 5823 -298 1947 148 0 14 chr5 152424556 152424846 -47205304 - AluJb SINE Alu -21 291 6 639 184 7 71 chr5 152424885 152425026 -47205124 - MLT1A1 LTR MaLR -53 312 181 244 286 148 14 chr5 152425030 152425247 -47204903 + L1ME4a LINE L1 5872 6117 -4 25 0 0 0 chr5 152425764 152425789 -47204361 + AT_rich Low_complexity Low_complexity 1 25 0 663 263 99 13 chr5 152427135 152427367 -47202783 - MIR SINE MIR -8 254 3 254 284 37 0 chr5 152427807 152427888 -47202262 - MIR3 SINE MIR -15 193 110 511 309 21 11 chr5 152428037 152428225 -47201925 + MIR SINE MIR 8 197 -65 1083 126 30 0 chr5 152428262 152428461 -47201689 + L1MC3 LINE L1 7581 7785 0 6935 31 0 34 chr5 152428666 152429906 -47200244 + L1P2 LINE L1 4524 5721 -434 3673 24 11 4 chr5 152429968 152430434 -47199716 + L1PA4 LINE L1 5686 6154 -1 182 358 8 42 chr5 152430435 152430555 -47199595 + MIR SINE MIR 19 134 -74 1451 234 98 43 chr5 152430622 152431135 -47199015 + MLT1F LTR MaLR 2 542 0 240 35 0 0 chr5 152431189 152431218 -47198932 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 187 283 9 66 chr5 152434832 152434938 -47195212 - MIR SINE MIR -71 191 92 830 291 27 24 chr5 152435274 152435607 -47194543 + L1ME4a LINE L1 5583 5916 -205 347 70 0 0 chr5 152435664 152435707 -47194443 - U6 snRNA snRNA -63 44 2 291 354 31 8 chr5 152435916 152436043 -47194107 - MIR SINE MIR -63 145 16 2143 115 0 0 chr5 152436268 152436546 -47193604 + AluSx SINE Alu 22 299 -13 251 200 17 17 chr5 152437081 152437141 -47193009 - MIR SINE MIR -94 114 55 1116 150 14 33 chr5 152437831 152438044 -47192106 + MER3 DNA MER1_type 1 209 0 2029 102 43 30 chr5 152438279 152438582 -47191568 + AluSx SINE Alu 1 307 -5 423 198 52 52 chr5 152438838 152438954 -47191196 + L1ME LINE L1 5524 5639 -482 2521 66 0 3 chr5 152438962 152439263 -47190887 - AluY SINE Alu -11 300 1 5548 123 25 0 chr5 152439296 152440151 -47189999 + L1MC1 LINE L1 5449 6324 -9 334 259 53 15 chr5 152440207 152440338 -47189812 + L1ME LINE L1 5668 5803 -318 440 322 44 15 chr5 152440339 152440544 -47189606 + L2 LINE L2 2481 2691 -623 27 29 0 0 chr5 152440742 152440776 -47189374 + AT_rich Low_complexity Low_complexity 1 34 0 1178 253 57 66 chr5 152440816 152440945 -47189205 - L1ME3 LINE L1 -302 5860 5731 207 0 0 0 chr5 152440945 152440968 -47189182 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2394 76 7 3 chr5 152440970 152441274 -47188876 - AluY SINE Alu -3 308 4 1178 253 57 66 chr5 152441274 152441461 -47188689 - L1ME3 LINE L1 -432 5730 5543 1794 166 3 11 chr5 152441461 152441791 -47188359 - AluSq SINE Alu 0 329 2 1178 253 57 66 chr5 152441791 152442178 -47187972 - L1ME3 LINE L1 -619 5543 5164 2267 91 0 10 chr5 152442178 152442474 -47187676 + AluSg1 SINE Alu 1 293 -16 1178 253 57 66 chr5 152442474 152442628 -47187522 - L1ME3 LINE L1 -998 5164 5010 429 131 0 0 chr5 152442630 152442722 -47187428 - AluSx SINE Alu 0 314 223 1087 118 0 7 chr5 152442723 152442875 -47187275 - AluSx SINE Alu -155 157 7 1198 283 120 20 chr5 152442880 152443680 -47186470 - L1ME3 LINE L1 -1130 5016 4137 281 203 45 75 chr5 152444116 152444249 -47185901 - L1MC5 LINE L1 -430 7531 7403 831 293 124 30 chr5 152444361 152444919 -47185231 + L2 LINE L2 2688 3308 -5 977 140 25 0 chr5 152445678 152445835 -47184315 + L1MB2 LINE L1 5999 6159 -12 1540 190 3 25 chr5 152446916 152447232 -47182918 + AluJo SINE Alu 1 309 -3 746 264 5 48 chr5 152447365 152447632 -47182518 - L1ME4a LINE L1 -207 5914 5693 1865 149 0 32 chr5 152448041 152448357 -47181793 + AluJb SINE Alu 1 306 -6 374 265 25 48 chr5 152449307 152449446 -47180704 + MIR SINE MIR 17 147 -61 445 281 68 68 chr5 152450284 152450533 -47179617 + LTR16C LTR ERVL 238 486 -5 409 224 109 48 chr5 152451106 152451253 -47178897 + L1ME4a LINE L1 5965 6120 -1 227 299 155 40 chr5 152451976 152452254 -47177896 + L2 LINE L2 2608 2917 -397 1581 269 61 67 chr5 152452700 152452768 -47177382 - L2 LINE L2 -4 3309 3242 1727 181 0 3 chr5 152452768 152453056 -47177094 + AluJo SINE Alu 1 287 -25 1581 269 61 67 chr5 152453056 152453089 -47177061 - L2 LINE L2 -71 3242 3210 2035 149 0 3 chr5 152453089 152453398 -47176752 + AluJb SINE Alu 1 308 -4 1581 269 61 67 chr5 152453398 152454218 -47175932 - L2 LINE L2 -103 3210 2386 2254 173 105 17 chr5 152454446 152454903 -47175247 + MLT1D LTR MaLR 1 551 -16 709 246 37 5 chr5 152454991 152455182 -47174968 + L2 LINE L2 2430 2626 -688 571 217 0 0 chr5 152455196 152455311 -47174839 + L1MD3 LINE L1 7845 7959 -36 2752 218 91 19 chr5 152455439 152456156 -47173994 + L1MC4a LINE L1 7035 7802 -6 1190 209 56 3 chr5 152457517 152457819 -47172331 + L1ME4a LINE L1 5518 5835 -286 337 269 54 20 chr5 152457892 152458041 -47172109 + L1ME4a LINE L1 5965 6118 -3 1173 188 24 0 chr5 152458188 152458401 -47171749 + MER20 DNA MER1_type 2 219 0 285 302 115 0 chr5 152459015 152459154 -47170996 - MIR3 SINE MIR -11 197 43 363 161 0 0 chr5 152459553 152459615 -47170535 - L2 LINE L2 -3 3310 3249 667 237 101 31 chr5 152459975 152460203 -47169947 + MIR SINE MIR 4 247 -15 1702 110 25 0 chr5 152460616 152460861 -47169289 - L1MC1 LINE L1 -604 5729 5479 3519 111 26 65 chr5 152460861 152461204 -47168946 + L1MC1 LINE L1 5709 6019 -314 2142 134 7 0 chr5 152461204 152461503 -47168647 + AluSx SINE Alu 1 301 -11 3519 111 26 65 chr5 152461503 152461807 -47168343 + L1MC1 LINE L1 6019 6333 0 255 318 103 38 chr5 152462088 152462349 -47167801 + L2 LINE L2 2542 2819 -495 1828 234 83 31 chr5 152462520 152463056 -47167094 + MLT1F1 LTR MaLR 1 565 -2 412 331 27 72 chr5 152463289 152463582 -47166568 + L2 LINE L2 2920 3199 -73 * 6514 241 94 29 chr5 152463569 152464593 -47165557 + L2 LINE L2 643 1599 -1714 1136 90 7 0 chr5 152464593 152464748 -47165402 + L1MB3 LINE L1 6026 6181 -2 6514 241 94 29 chr5 152464748 152465424 -47164726 + L2 LINE L2 1599 2230 -1083 1951 168 0 0 chr5 152465424 152465727 -47164423 - AluSx SINE Alu -9 303 1 6514 241 94 29 chr5 152465727 152466537 -47163613 + L2 LINE L2 2230 3313 0 202 333 0 0 chr5 152466539 152466599 -47163551 + L2 LINE L2 3254 3313 0 243 315 148 0 chr5 152466622 152466730 -47163420 + L2 LINE L2 3148 3271 -1 373 239 68 68 chr5 152467373 152467536 -47162614 + MIR3 SINE MIR 3 165 -43 640 289 204 34 chr5 152467662 152469141 -47161009 - L2 LINE L2 0 3272 1525 646 111 10 0 chr5 152470673 152470772 -47159378 + HY3 scRNA scRNA 1 100 -1 205 327 48 10 chr5 152470846 152470950 -47159200 + MIR SINE MIR 103 210 -52 1718 116 8 8 chr5 152470992 152471234 -47158916 - AluSq SINE Alu -71 242 1 394 252 73 60 chr5 152472300 152472498 -47157652 - MIR SINE MIR -50 212 21 249 343 18 24 chr5 152473339 152473508 -47156642 + L2 LINE L2 2892 3059 -213 763 234 18 23 chr5 152473766 152473984 -47156166 + MIR SINE MIR 41 257 -5 224 333 101 22 chr5 152474012 152474150 -47156000 + L2 LINE L2 2364 2512 -802 2585 40 0 3 chr5 152475185 152475483 -47154667 - AluY SINE Alu -14 297 1 206 242 88 22 chr5 152475917 152476008 -47154142 - MIR SINE MIR -79 129 33 288 315 11 0 chr5 152476369 152476461 -47153689 - L2 LINE L2 -5 3308 3216 345 333 56 43 chr5 152476894 152477289 -47152861 - L2 LINE L2 -188 3084 2685 970 211 0 0 chr5 152477384 152477559 -47152591 + FAM SINE Alu 1 175 0 1828 158 13 23 chr5 152477910 152478213 -47151937 - AluJo SINE Alu -12 300 1 1670 91 189 7 chr5 152478430 152478715 -47151435 + MER44D DNA MER2_type 2 608 -1 1199 170 76 47 chr5 152478988 152479265 -47150885 + L1MC4a LINE L1 7519 7803 -5 298 196 55 164 chr5 152479340 152479615 -47150535 + MLT-int LTR MaLR 1470 1714 -21 2133 89 0 7 chr5 152679620 152679912 -46950238 + AluSg SINE Alu 13 302 -8 294 143 0 0 chr5 152680355 152680404 -46949746 + (GGA)n Simple_repeat Simple_repeat 2 50 0 199 310 0 58 chr5 152680572 152680659 -46949491 - L2 LINE L2 -2 3311 3230 * 261 325 58 64 chr5 152680657 152680845 -46949305 - MIR SINE MIR -3 259 73 380 335 96 14 chr5 152681549 152681768 -46948382 + L1MC4a LINE L1 5671 5906 -215 542 128 0 0 chr5 152682299 152682377 -46947773 + AluS SINE Alu 2 79 -234 1775 105 0 0 chr5 152682419 152682658 -46947492 - AluSc SINE Alu -70 239 1 1143 210 56 10 chr5 152683275 152683580 -46946570 + L1MA4 LINE L1 5981 6299 -1 290 217 308 17 chr5 152683598 152683647 -46946503 + HAL1 LINE L1 1578 1612 -895 1655 111 0 8 chr5 152683647 152683882 -46946268 + AluSx SINE Alu 1 233 -79 290 217 308 17 chr5 152683882 152683952 -46946198 + HAL1 LINE L1 1612 1732 -775 2134 96 3 26 chr5 152684080 152684383 -46945767 + AluSp SINE Alu 1 296 -17 369 75 0 0 chr5 152684960 152685013 -46945137 + (TG)n Simple_repeat Simple_repeat 2 54 0 5931 133 44 38 chr5 152685532 152685984 -46944166 + L1MA5 LINE L1 4903 5351 -949 1624 141 34 11 chr5 152685984 152686253 -46943897 + AluSx SINE Alu 13 287 -25 1944 121 6 19 chr5 152686253 152686566 -46943584 + AluSc SINE Alu 1 309 0 5931 133 44 38 chr5 152686566 152686616 -46943534 + L1MA5 LINE L1 5351 5399 -901 1893 122 3 33 chr5 152686616 152686919 -46943231 + AluSx SINE Alu 1 294 -18 5931 133 44 38 chr5 152686919 152687223 -46942927 + L1MA5 LINE L1 5399 5700 -600 2257 78 0 0 chr5 152687223 152687517 -46942633 + AluY SINE Alu 1 294 -17 5931 133 44 38 chr5 152687517 152687847 -46942303 + L1MA5 LINE L1 5700 6046 -254 2123 129 0 0 chr5 152687847 152688149 -46942001 + AluSx SINE Alu 1 302 -10 5931 133 44 38 chr5 152688149 152688406 -46941744 + L1MA5 LINE L1 6046 6300 0 2390 66 0 0 chr5 152688986 152689287 -46940863 - AluY SINE Alu -10 301 1 452 200 0 29 chr5 152689513 152689618 -46940532 - MIR SINE MIR -15 247 146 234 146 55 30 chr5 152689620 152689785 -46940365 + (TTATA)n Simple_repeat Simple_repeat 1 169 0 298 199 34 34 chr5 152689850 152690026 -46940124 + (TATAA)n Simple_repeat Simple_repeat 3 178 0 * 330 188 53 29 chr5 152689917 152690087 -46940063 + (TTATA)n Simple_repeat Simple_repeat 5 178 0 221 207 59 11 chr5 152690107 152690388 -46939762 + (TTATA)n Simple_repeat Simple_repeat 1 294 0 301 226 75 21 chr5 152690394 152690487 -46939663 + L1MCa LINE L1 1995 2092 -4334 317 115 18 97 chr5 152690489 152690520 -46939630 + (TTATA)n Simple_repeat Simple_repeat 1 33 -71 252 0 0 0 chr5 152690520 152690548 -46939602 + (TC)n Simple_repeat Simple_repeat 2 29 0 234 0 0 0 chr5 152690547 152690573 -46939577 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 317 115 18 97 chr5 152690548 152690574 -46939576 + (TTATA)n Simple_repeat Simple_repeat 33 59 -45 1913 113 35 0 chr5 152690574 152690856 -46939294 - AluSx SINE Alu -20 292 1 317 115 18 97 chr5 152690856 152690935 -46939215 + (TTATA)n Simple_repeat Simple_repeat 59 104 0 232 188 17 45 chr5 152690935 152691001 -46939149 - MIR SINE MIR -63 145 104 23 0 0 0 chr5 152691729 152691752 -46938398 + AT_rich Low_complexity Low_complexity 1 23 0 396 0 0 0 chr5 152691946 152691990 -46938160 + (TG)n Simple_repeat Simple_repeat 2 45 0 577 274 10 35 chr5 152692663 152692860 -46937290 + MIR SINE MIR 70 261 -1 2095 90 0 56 chr5 152692889 152693210 -46936940 - AluSx SINE Alu -9 303 1 2031 68 7 14 chr5 152693222 152693531 -46936619 - AluSc SINE Alu 0 307 1 2351 67 3 0 chr5 152693583 152693882 -46936268 - AluSp SINE Alu -13 300 1 648 283 17 11 chr5 152693888 152694065 -46936085 - MER5B DNA MER1_type 0 178 1 201 265 186 20 chr5 152694066 152694168 -46935982 - MIR3 SINE MIR -48 160 42 370 267 60 26 chr5 152694436 152694552 -46935598 + L2 LINE L2 3193 3312 -1 216 0 0 0 chr5 152694575 152694599 -46935551 + (T)n Simple_repeat Simple_repeat 1 24 0 190 243 81 54 chr5 152695544 152695655 -46934495 - MIR SINE MIR -70 192 79 339 292 58 19 chr5 152696091 152696245 -46933905 - MIR SINE MIR -37 225 66 299 275 12 0 chr5 152696692 152696772 -46933378 - MIR SINE MIR -2 260 180 262 237 102 85 chr5 152697201 152697378 -46932772 + MIR3 SINE MIR 3 182 -26 358 250 109 33 chr5 152697419 152697511 -46932639 - L2 LINE L2 -16 3297 3199 231 204 0 0 chr5 152697538 152697592 -46932558 + (TATATG)n Simple_repeat Simple_repeat 5 58 0 1773 117 2 154 chr5 152697592 152698002 -46932148 + MER7A DNA MER2_type 1 346 0 191 250 108 50 chr5 152698013 152698133 -46932017 - L2 LINE L2 -157 3156 3030 398 272 203 0 chr5 152698230 152698395 -46931755 - MIR SINE MIR -21 241 45 477 164 60 69 chr5 152699428 152699544 -46930606 - L2 LINE L2 -16 3297 3183 2032 125 0 3 chr5 152699606 152699909 -46930241 + AluSx SINE Alu 1 302 -10 300 261 59 78 chr5 152699951 152700104 -46930046 + MIR SINE MIR 5 154 -108 328 261 11 23 chr5 152700126 152700199 -46929951 + L1MCa LINE L1 2006 2079 -4347 1868 102 17 7 chr5 152700199 152700492 -46929658 - AluSx SINE Alu -16 296 1 328 261 11 23 chr5 152700492 152700506 -46929644 + L1MCa LINE L1 2079 2092 -4334 952 71 14 0 chr5 152701234 152701375 -46928775 + Alu SINE Alu 169 311 0 558 280 96 46 chr5 152701379 152701551 -46928599 + MIR SINE MIR 12 201 -61 1452 137 13 4 chr5 152701551 152701784 -46928366 + AluJo SINE Alu 61 295 -17 558 280 96 46 chr5 152701784 152701850 -46928300 + MIR SINE MIR 201 262 0 1827 166 0 0 chr5 152701967 152702269 -46927881 - AluJb SINE Alu -7 305 4 2213 89 0 0 chr5 152702898 152703190 -46926960 - AluSg SINE Alu -18 292 1 511 235 164 16 chr5 152703570 152703753 -46926397 - MIR SINE MIR -19 243 34 915 235 30 30 chr5 152704096 152704330 -46925820 + MIR SINE MIR 13 246 -16 650 223 117 44 chr5 152704340 152704432 -46925718 + Charlie8 DNA MER1_type 28 112 -229 2374 75 0 0 chr5 152704432 152704737 -46925413 + AluY SINE Alu 1 305 -6 650 223 117 44 chr5 152704737 152704850 -46925300 + Charlie8 DNA MER1_type 112 248 -93 2333 88 3 0 chr5 152704862 152705167 -46924983 - AluSg SINE Alu -4 306 1 389 238 0 79 chr5 152705219 152705345 -46924805 - LTR16A1 LTR ERVL -77 380 265 407 292 43 0 chr5 152705688 152705819 -46924331 - MIR SINE MIR -67 141 20 801 220 13 0 chr5 152706542 152706692 -46923458 - AluJo/FRAM SINE Alu -27 285 134 1493 113 9 4 chr5 152706692 152706922 -46923228 - AluSg/x SINE Alu -10 302 72 2130 106 7 0 chr5 152707113 152707414 -46922736 + AluSq SINE Alu 1 303 -10 261 226 21 129 chr5 152707513 152707558 -46922592 - MIR SINE MIR -117 145 113 2257 65 0 23 chr5 152707558 152707865 -46922285 + AluY SINE Alu 1 300 -11 261 226 21 129 chr5 152707865 152707912 -46922238 - MIR SINE MIR -149 113 63 1498 179 7 33 chr5 152707912 152708214 -46921936 - AluJb SINE Alu -18 294 1 607 283 86 5 chr5 152708472 152708670 -46921480 + MIR SINE MIR 28 241 -21 2752 142 42 48 chr5 152708869 152708920 -46921230 - MLT2B1 LTR ERVL 0 520 470 1958 123 32 0 chr5 152708920 152709204 -46920946 + AluSx SINE Alu 1 293 -19 2752 142 42 48 chr5 152709204 152709572 -46920578 - MLT2B1 LTR ERVL -50 470 102 2055 125 0 0 chr5 152709572 152709868 -46920282 + AluJb SINE Alu 10 305 -7 2752 142 42 48 chr5 152709868 152709969 -46920181 - MLT2B1 LTR ERVL -418 102 2 296 276 31 10 chr5 152710241 152710339 -46919811 + MIR SINE MIR 157 256 -6 357 39 0 0 chr5 152710365 152710416 -46919734 - AluY SINE Alu 0 301 251 2239 59 24 0 chr5 152710432 152710720 -46919430 + AluY SINE Alu 1 295 -16 1803 149 17 0 chr5 152710823 152711111 -46919039 + AluSx SINE Alu 1 293 -19 637 172 0 17 chr5 152711111 152711220 -46918930 - FLAM_C SINE Alu -174 138 30 1778 196 27 32 chr5 152711225 152711616 -46918534 - MER69B DNA AcHobo -1443 1083 693 2424 63 0 0 chr5 152711616 152711916 -46918234 + AluY SINE Alu 1 300 -11 1778 196 27 32 chr5 152711916 152711964 -46918186 - MER69B DNA AcHobo -1833 693 646 585 172 0 0 chr5 152711993 152712086 -46918064 - AluS SINE Alu -218 94 2 1585 264 136 14 chr5 152712092 152712672 -46917478 - MER69B DNA AcHobo -569 657 7 288 241 69 35 chr5 152712809 152712896 -46917254 + L2 LINE L2 3173 3262 -51 198 271 0 57 chr5 152712940 152713010 -46917140 - MIR SINE MIR -114 148 83 21 0 0 0 chr5 152714031 152714052 -46916098 + AT_rich Low_complexity Low_complexity 1 21 0 657 268 93 30 chr5 152714223 152714552 -46915598 + L1MC4a LINE L1 5478 5639 -663 2201 70 20 0 chr5 152714555 152714853 -46915297 + AluY SINE Alu 1 304 -7 606 232 104 100 chr5 152714863 152715113 -46915037 - MIR SINE MIR 0 262 12 810 123 57 0 chr5 152715351 152715473 -46914677 + FLAM_C SINE Alu 1 129 -4 2140 68 0 7 chr5 152715478 152715756 -46914394 + AluY SINE Alu 1 276 -35 1321 192 4 4 chr5 152715801 152716051 -46914099 - AluJb SINE Alu -62 250 1 1972 116 24 0 chr5 152716054 152716348 -46913802 - AluSx SINE Alu -11 301 1 283 335 47 47 chr5 152717052 152717243 -46912907 - MIR SINE MIR -25 237 47 347 287 86 61 chr5 152717290 152717569 -46912581 - L1ME4a LINE L1 -38 6083 5798 611 260 12 12 chr5 152717589 152717758 -46912392 - L1ME4a LINE L1 -470 5651 5483 2049 112 7 3 chr5 152717774 152718078 -46912072 + AluY SINE Alu 1 305 -6 1893 152 0 7 chr5 152718078 152718387 -46911763 + AluJb SINE Alu 1 307 -5 2063 107 7 10 chr5 152718474 152718784 -46911366 - AluSg SINE Alu -1 309 1 24 0 0 0 chr5 152718815 152718839 -46911311 + AT_rich Low_complexity Low_complexity 1 24 0 2526 37 0 0 chr5 152718888 152719184 -46910966 - AluY SINE Alu -15 296 1 423 87 29 14 chr5 152719203 152719272 -46910878 - L1MC4 LINE L1 -2 8040 7971 2179 101 0 3 chr5 152719283 152719589 -46910561 - AluSc SINE Alu -2 307 3 2291 63 3 0 chr5 152719604 152719891 -46910259 - AluY SINE Alu -23 288 1 25 31 0 0 chr5 152719893 152719925 -46910225 + AT_rich Low_complexity Low_complexity 1 32 0 312 313 53 40 chr5 152719990 152720140 -46910010 + MER5A DNA MER1_type 38 189 0 2106 99 7 0 chr5 152720917 152721210 -46908940 + AluSx SINE Alu 11 305 -7 2296 61 0 10 chr5 152721210 152721505 -46908645 + AluY SINE Alu 1 292 -19 27 29 0 0 chr5 152721510 152721544 -46908606 + AT_rich Low_complexity Low_complexity 1 34 0 2033 109 3 3 chr5 152721544 152721838 -46908312 + AluSx SINE Alu 1 294 -18 225 0 0 0 chr5 152721845 152721870 -46908280 + (CA)n Simple_repeat Simple_repeat 2 26 0 194 164 18 0 chr5 152721896 152721951 -46908199 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 601 297 10 25 chr5 152722076 152722278 -46907872 + MIR SINE MIR 16 214 -48 546 277 60 18 chr5 152722302 152722584 -46907566 - L1ME4a LINE L1 -118 6003 5710 1966 119 0 26 chr5 152722594 152722896 -46907254 + AluSx SINE Alu 1 294 -18 326 288 22 22 chr5 152722973 152723112 -46907038 - L1ME4a LINE L1 -463 5658 5520 418 295 183 7 chr5 152723417 152723537 -46906613 + MIR SINE MIR 1 143 -65 2249 99 3 3 chr5 152723737 152724050 -46906100 + AluSp SINE Alu 1 313 0 418 157 14 0 chr5 152724166 152724236 -46905914 + MER81 DNA DNA 43 113 -1 197 321 25 25 chr5 152725587 152725668 -46904482 - L2 LINE L2 -209 3063 2983 * 515 260 52 64 chr5 152725665 152725713 -46904437 - L2 LINE L2 -4 3309 3262 1989 120 10 7 chr5 152725713 152726012 -46904138 - AluSg SINE Alu -10 300 1 515 260 52 64 chr5 152726012 152726136 -46904014 - L2 LINE L2 -51 3262 3139 1536 161 183 35 chr5 152726136 152726203 -46903947 - MER31B LTR ERV1 0 466 410 2082 105 13 13 chr5 152726203 152726507 -46903643 - AluSx SINE Alu -8 304 1 1536 161 183 35 chr5 152726507 152726843 -46903307 - MER31B LTR ERV1 -56 410 3 858 206 0 6 chr5 152726907 152727067 -46903083 - FRAM SINE Alu -7 159 1 21 36 0 0 chr5 152727079 152727107 -46903043 + AT_rich Low_complexity Low_complexity 1 28 0 1809 112 0 0 chr5 152727124 152727373 -46902777 - AluSq SINE Alu -64 249 1 448 269 121 13 chr5 152727409 152727626 -46902524 - L2 LINE L2 -288 3025 2794 781 147 0 31 chr5 152729737 152729866 -46900284 - AluJb SINE Alu -52 260 136 868 62 11 62 chr5 152729868 152730045 -46900105 + (TTCC)n Simple_repeat Simple_repeat 1 168 0 1365 137 65 28 chr5 152730054 152730302 -46899848 - AluSx SINE Alu -55 257 1 783 153 7 60 chr5 152730309 152730459 -46899691 - FLAM_C SINE Alu 0 143 2 2116 123 3 0 chr5 152730491 152730792 -46899358 + AluSq SINE Alu 1 302 -11 349 321 95 58 chr5 152731148 152731422 -46898728 - L2 LINE L2 0 3272 2989 1573 94 0 5 chr5 152731740 152731975 -46898175 - AluSc SINE Alu 0 304 71 * 2118 89 3 58 chr5 152731973 152732300 -46897850 - AluSp SINE Alu -4 309 1 431 86 0 0 chr5 152732310 152732368 -46897782 - tRNA-Asp-GAC tRNA tRNA 0 75 18 592 173 0 29 chr5 152732368 152732472 -46897678 - AluSc SINE Alu -207 102 2 375 187 154 51 chr5 152732486 152732700 -46897450 - Zaphod DNA AcHobo -3150 881 646 1081 173 35 0 chr5 152732705 152732902 -46897248 + AluJb SINE Alu 6 209 -103 21 0 0 0 chr5 152732952 152732973 -46897177 + AT_rich Low_complexity Low_complexity 1 21 0 2218 216 78 32 chr5 152733032 152733587 -46896563 - Zaphod DNA AcHobo -3450 581 2 474 256 320 5 chr5 152733591 152733794 -46896356 - MLT1L LTR MaLR -348 267 1 383 289 133 0 chr5 152733794 152733929 -46896221 - MIR SINE MIR -109 153 1 243 316 76 29 chr5 152733940 152734111 -46896039 - L2 LINE L2 -267 3005 2827 2144 116 33 38 chr5 152734390 152734920 -46895230 - MER51A LTR ERV1 -16 618 1 411 277 254 16 chr5 152734970 152735277 -46894873 - L2 LINE L2 -954 2360 1981 720 233 0 7 chr5 152735788 152735934 -46894216 + MER45A DNA AcHobo 1 145 -33 414 134 160 101 chr5 152735934 152735995 -46894155 - MER53 DNA DNA -63 126 70 2131 102 0 3 chr5 152735995 152736290 -46893860 + AluSq SINE Alu 1 294 -19 414 134 160 101 chr5 152736290 152736347 -46893803 - MER53 DNA DNA -119 70 1 551 274 258 3 chr5 152736651 152736965 -46893185 + L2 LINE L2 2851 3244 -69 2016 107 10 0 chr5 152736994 152737284 -46892866 + AluSx SINE Alu 1 293 -19 884 151 78 12 chr5 152737284 152737450 -46892700 + AluJo/FRAM SINE Alu 134 310 -2 334 275 145 38 chr5 152737745 152738037 -46892113 + MLT1K LTR MaLR 209 588 0 890 161 0 34 chr5 152738038 152738187 -46891963 - FAM SINE Alu -41 144 1 2446 44 3 0 chr5 152738836 152739133 -46891017 + AluY SINE Alu 1 298 -13 1792 138 20 16 chr5 152739380 152739685 -46890465 + AluJb SINE Alu 1 306 -6 326 296 163 43 chr5 152739822 152740222 -46889928 - L1ME4a LINE L1 -215 5906 5419 1788 142 17 0 chr5 152740222 152740517 -46889633 - AluJo SINE Alu -12 300 1 326 296 163 43 chr5 152740517 152740673 -46889477 - L1ME4a LINE L1 -702 5419 5283 585 42 0 0 chr5 152740876 152740948 -46889202 + (TTCC)n Simple_repeat Simple_repeat 2 73 0 726 182 12 6 chr5 152740949 152741119 -46889031 + CT-rich Low_complexity Low_complexity 2 172 0 2173 110 7 0 chr5 152741119 152741429 -46888721 - AluSx SINE Alu 0 312 1 2221 148 53 26 chr5 152742446 152742900 -46887250 - MER31B LTR ERV1 0 466 1 838 174 64 12 chr5 152742900 152743072 -46887078 - MER31B-int LTR ERV1 -20 4916 4736 297 145 97 48 chr5 152743070 152743132 -46887018 - MER31B-int LTR ERV1 -388 4548 4484 * 368 168 126 32 chr5 152743343 152743438 -46886712 - LTR37A LTR ERV1 -310 116 13 186 315 148 9 chr5 152743490 152743598 -46886552 + MIR SINE MIR 33 155 -107 * 590 225 65 7 chr5 152743590 152743728 -46886422 - MIR SINE MIR 0 262 117 382 293 152 0 chr5 152744175 152744339 -46885811 - MIR SINE MIR -70 192 4 729 278 68 4 chr5 152744407 152744641 -46885509 + MIR SINE MIR 8 256 -6 210 279 59 29 chr5 152745152 152745220 -46884930 + MIR SINE MIR 174 243 -19 325 342 159 17 chr5 152745251 152745514 -46884636 - L2 LINE L2 -43 3270 3046 2091 97 7 0 chr5 152745514 152745793 -46884357 + AluSx SINE Alu 1 281 -31 325 342 159 17 chr5 152745793 152745938 -46884212 - L2 LINE L2 -267 3046 2804 280 191 132 0 chr5 152746073 152746141 -46884009 + L2 LINE L2 3147 3223 -49 471 307 98 19 chr5 152746322 152746537 -46883613 - MIR SINE MIR -14 248 17 2073 115 0 3 chr5 152747949 152748245 -46881905 - AluSg SINE Alu -14 296 2 228 276 117 35 chr5 152748268 152748413 -46881737 - L1ME4a LINE L1 -26 6095 5939 932 210 127 4 chr5 152748425 152748654 -46881496 - MIR SINE MIR -3 259 3 309 331 24 24 chr5 152748657 152748781 -46881369 - L1ME4a LINE L1 -190 5931 5808 192 329 106 0 chr5 152748868 152748953 -46881197 - MIR SINE MIR 0 262 169 652 153 83 0 chr5 152749097 152749241 -46880909 - L1MD2 LINE L1 -2 6357 6202 2155 100 0 10 chr5 152749280 152749581 -46880569 - AluSq SINE Alu -15 298 1 387 318 60 13 chr5 152749705 152749856 -46880294 - MIR SINE MIR -97 165 8 1543 284 82 15 chr5 152751335 152751520 -46878630 + L2 LINE L2 2508 2679 -634 1607 171 16 13 chr5 152751520 152751824 -46878326 + AluJo SINE Alu 1 305 -7 1543 284 82 15 chr5 152751824 152752386 -46877764 + L2 LINE L2 2679 3311 -2 1751 224 35 18 chr5 152752424 152752914 -46877236 - L1M4 LINE L1 -1596 4550 4053 204 40 0 0 chr5 152752947 152752972 -46877178 + (TG)n Simple_repeat Simple_repeat 2 26 0 478 152 0 22 chr5 152753007 152753099 -46877051 - L1M4 LINE L1 -1062 5084 4995 609 261 113 10 chr5 152753099 152753294 -46876856 + MER20B DNA MER1_type 30 244 -539 522 166 90 0 chr5 152753410 152753555 -46876595 + MER20B DNA MER1_type 532 689 -94 2353 57 7 3 chr5 152753886 152754182 -46875968 + AluY SINE Alu 1 297 -14 38 0 0 0 chr5 152754199 152754237 -46875913 + AT_rich Low_complexity Low_complexity 1 38 0 399 146 42 0 chr5 152754237 152754381 -46875769 + (TATAA)n Simple_repeat Simple_repeat 5 154 0 22 0 0 0 chr5 152754381 152754403 -46875747 + AT_rich Low_complexity Low_complexity 1 22 0 817 191 0 20 chr5 152754404 152754556 -46875594 + AluJb SINE Alu 158 306 -6 534 221 50 0 chr5 152754664 152754789 -46875361 + L1ME LINE L1 5651 5789 -373 2049 115 10 0 chr5 152754851 152755155 -46874995 - AluSp SINE Alu -6 307 1 1985 147 0 0 chr5 152755162 152755474 -46874676 - AluSx SINE Alu 0 312 1 2007 113 14 7 chr5 152755485 152755778 -46874372 - AluSq SINE Alu -18 295 1 4357 161 11 26 chr5 152755778 152756589 -46873561 - L1MB1 LINE L1 -46 6122 5324 332 109 0 0 chr5 152756593 152756648 -46873502 - FLAM_A SINE Alu 0 133 79 746 281 25 25 chr5 152756654 152756857 -46873293 - MIR SINE MIR -58 204 2 416 259 45 75 chr5 152756861 152756887 -46873263 + Charlie8 DNA MER1_type 86 111 -2306 2084 121 0 3 chr5 152756887 152757194 -46872956 + AluSq SINE Alu 1 306 -7 416 259 45 75 chr5 152757194 152757368 -46872782 + Charlie8 DNA MER1_type 111 280 -2137 2066 104 13 0 chr5 152757692 152757991 -46872159 + AluSx SINE Alu 1 303 -9 24 53 0 0 chr5 152758246 152758284 -46871866 + AT_rich Low_complexity Low_complexity 1 38 0 742 268 67 25 chr5 152759664 152759903 -46870247 + MIR SINE MIR 14 262 0 1076 178 40 43 chr5 152759915 152760168 -46869982 + AluJo SINE Alu 49 300 -12 420 230 0 0 chr5 152760543 152760617 -46869533 - MER5A DNA MER1_type -107 82 9 539 331 59 40 chr5 152760620 152760892 -46869258 - L3 LINE CR1 -18 1559 1283 2237 86 0 13 chr5 152761183 152761485 -46868665 - AluSg SINE Alu -12 298 1 249 355 128 14 chr5 152761519 152761730 -46868420 - L3 LINE CR1 -394 1183 949 1495 178 6 50 chr5 152761887 152762208 -46867942 - AluJo SINE Alu -5 307 1 394 243 268 47 chr5 152762299 152762575 -46867575 - L3 LINE CR1 -666 911 575 417 183 226 0 chr5 152762681 152762774 -46867376 - FLAM_A SINE Alu -27 115 2 954 177 17 11 chr5 152762836 152763011 -46867139 + L1PB4 LINE L1 5976 6151 -5 283 337 11 0 chr5 152763026 152763121 -46867029 - MER103 DNA DNA 0 166 71 247 369 48 10 chr5 152763237 152763340 -46866810 - L3 LINE CR1 -1034 543 437 568 330 71 6 chr5 152763581 152763827 -46866323 - MIR SINE MIR 0 262 5 275 274 255 0 chr5 152765515 152765617 -46864533 - L2 LINE L2 -5 3267 3140 184 327 35 18 chr5 152766252 152766365 -46863785 - MIR SINE MIR -111 151 37 370 270 11 0 chr5 152767100 152767189 -46862961 - L2 LINE L2 -196 3076 2987 205 301 10 87 chr5 152767619 152767680 -46862470 + MIR SINE MIR 18 69 -139 1571 157 3 70 chr5 152767680 152767840 -46862310 - AluJo SINE Alu -18 294 164 2129 107 3 3 chr5 152767840 152768148 -46862002 - AluSx SINE Alu -4 308 1 1571 157 3 70 chr5 152768148 152768300 -46861850 - AluJo SINE Alu -148 164 3 205 301 10 87 chr5 152768300 152768341 -46861809 + MIR SINE MIR 69 112 -96 180 0 0 0 chr5 152768386 152768406 -46861744 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1638 124 7 18 chr5 152768409 152768683 -46861467 - AluSq SINE Alu -36 277 7 25 31 0 0 chr5 152768683 152768715 -46861435 + AT_rich Low_complexity Low_complexity 1 32 0 848 201 152 69 chr5 152768785 152769148 -46861002 - L1MC4 LINE L1 -125 7917 7525 636 271 97 64 chr5 152769154 152769386 -46860764 - L2 LINE L2 -5 3308 3085 2127 98 3 0 chr5 152769386 152769671 -46860479 + AluSc SINE Alu 1 286 -23 636 271 97 64 chr5 152769671 152770057 -46860093 - L2 LINE L2 -228 3085 2674 481 283 159 46 chr5 152771089 152771435 -46858715 + L2 LINE L2 2875 3259 -54 714 240 14 0 chr5 152772398 152772544 -46857606 - Charlie8 DNA MER1_type -2152 265 118 898 156 0 0 chr5 152772558 152772693 -46857457 - AluJo SINE Alu -177 135 1 237 231 62 0 chr5 152772693 152772758 -46857392 - Charlie8 DNA MER1_type -2286 131 63 2126 99 14 0 chr5 152772758 152773050 -46857100 + AluSx SINE Alu 1 296 -16 281 209 0 0 chr5 152773080 152773123 -46857027 + AluSg/x SINE Alu 137 179 -123 * 2110 172 63 29 chr5 152773116 152773529 -46856621 - MER66B LTR ERV1 -59 427 1 399 162 0 0 chr5 152773529 152773597 -46856553 + AluJ/FRAM SINE Alu 230 297 -5 181 355 37 9 chr5 152773835 152773942 -46856208 + MIR SINE MIR 44 153 -55 2192 93 3 3 chr5 152774034 152774344 -46855806 - AluSp SINE Alu -3 310 1 591 296 19 12 chr5 152775177 152775339 -46854811 + MIR SINE MIR 10 172 -90 299 353 29 39 chr5 152775340 152775544 -46854606 + MIR SINE MIR 61 262 0 457 247 176 11 chr5 152775878 152776060 -46854090 + L2 LINE L2 3013 3224 -89 1627 166 3 46 chr5 152776199 152776525 -46853625 + AluJo SINE Alu 1 312 0 431 366 54 0 chr5 152776817 152777003 -46853147 - MIR SINE MIR -44 218 23 590 328 62 12 chr5 152777527 152777771 -46852379 - MIR SINE MIR -1 261 6 2121 132 0 0 chr5 152777795 152778099 -46852051 - AluSx SINE Alu -8 304 1 470 310 18 0 chr5 152778441 152778554 -46851596 + L2 LINE L2 3191 3305 -8 545 271 115 49 chr5 152778640 152778987 -46851163 + L2 LINE L2 2944 3313 0 2255 92 0 7 chr5 152780319 152780622 -46849528 - AluSx SINE Alu -11 301 1 257 151 170 0 chr5 152780767 152780820 -46849330 + L2 LINE L2 3211 3272 0 1562 83 13 22 chr5 152781043 152781273 -46848877 + L1MA2 LINE L1 6073 6300 -4 413 213 19 65 chr5 152781283 152781438 -46848712 - MLT1K LTR MaLR -91 497 350 429 259 54 68 chr5 152781452 152781472 -46848678 + MIR SINE MIR 12 31 -231 2480 61 0 3 chr5 152781472 152781782 -46848368 + AluY SINE Alu 1 309 -2 429 259 54 68 chr5 152781782 152781908 -46848242 + MIR SINE MIR 31 156 -106 1074 250 32 4 chr5 152781909 152782157 -46847993 - MIR SINE MIR -4 258 4 294 220 0 99 chr5 152782166 152782257 -46847893 + MIR SINE MIR 150 231 -31 648 348 29 11 chr5 152782283 152782556 -46847594 - MLT1K LTR MaLR -236 352 75 252 0 0 0 chr5 152782562 152782590 -46847560 + (A)n Simple_repeat Simple_repeat 1 28 0 1666 103 19 27 chr5 152782816 152783077 -46847073 - L1PA10 LINE L1 -3 6165 5907 394 103 39 77 chr5 152783739 152783817 -46846333 - MSTA LTR MaLR 0 428 354 1991 103 177 23 chr5 152783817 152784167 -46845983 - MSTA LTR MaLR -24 404 1 2257 125 6 8 chr5 152784614 152784967 -46845183 - MER41B LTR ERV1 -88 547 196 464 209 38 19 chr5 152785096 152785254 -46844896 - Charlie7 DNA MER1_type -6 2606 2446 3116 197 51 5 chr5 152785352 152786023 -46844127 - L1ME1 LINE L1 -5 6230 5529 1909 134 28 0 chr5 152786133 152786423 -46843727 - AluSx SINE Alu -14 298 1 391 161 0 32 chr5 152786444 152786537 -46843613 - L1ME1 LINE L1 -4164 2232 2143 287 209 0 0 chr5 152786548 152786615 -46843535 - L1MB8 LINE L1 0 6178 6112 1748 127 14 31 chr5 152786616 152786908 -46843242 + AluJo SINE Alu 1 287 -25 593 165 39 8 chr5 152786953 152787080 -46843070 + MER41B LTR ERV1 417 547 -88 294 93 0 0 chr5 152787315 152787358 -46842792 - MADE1 DNA Mariner -37 43 1 26 30 0 0 chr5 152787411 152787444 -46842706 + AT_rich Low_complexity Low_complexity 1 33 0 526 237 8 0 chr5 152787444 152787562 -46842588 - L1MB7 LINE L1 -56 6128 6010 3779 246 81 36 chr5 152787563 152787851 -46842299 - L1ME1 LINE L1 -4263 2133 1859 2096 102 0 0 chr5 152787851 152788136 -46842014 - AluSc SINE Alu -4 305 21 3779 246 81 36 chr5 152788136 152789287 -46840863 - L1ME1 LINE L1 -4537 1859 630 846 233 58 19 chr5 152789287 152789493 -46840657 + MER58A DNA MER1_type 3 216 -8 2011 123 3 0 chr5 152789494 152789787 -46840363 + AluSx SINE Alu 1 294 -18 931 197 14 40 chr5 152789957 152790180 -46839970 - L1ME1 LINE L1 -6137 259 43 1919 114 10 7 chr5 152790321 152790611 -46839539 - AluSx SINE Alu -21 291 1 476 243 53 53 chr5 152790880 152790917 -46839233 - MIR SINE MIR 0 262 226 2141 108 3 3 chr5 152790917 152791224 -46838926 + AluSq SINE Alu 1 307 -6 476 243 53 53 chr5 152791224 152791392 -46838758 - MIR SINE MIR -35 227 57 340 203 0 16 chr5 152791455 152791519 -46838631 - MER81 DNA DNA -41 73 11 259 327 59 0 chr5 152791564 152791665 -46838485 + MIR SINE MIR 156 262 0 821 303 161 16 chr5 152791700 152792186 -46837964 + LTR67 LTR ERVL 2 557 0 185 352 152 32 chr5 152792190 152792500 -46837650 + L2 LINE L2 2308 2654 -660 2246 96 0 6 chr5 152792683 152792995 -46837155 + AluSx SINE Alu 1 310 -2 2831 210 27 49 chr5 152792995 152793288 -46836862 - MER82 DNA MER2_type 0 653 355 881 154 11 63 chr5 152793288 152793463 -46836687 - FRAM SINE Alu 0 166 1 2831 210 27 49 chr5 152793463 152793837 -46836313 - MER82 DNA MER2_type -298 355 1 698 304 77 37 chr5 152793935 152794340 -46835810 - MLT2C2 LTR ERVL 0 464 44 * 1193 172 0 0 chr5 152794167 152794353 -46835797 - MLT1E3 LTR MaLR -387 237 52 1828 162 3 0 chr5 152794435 152794725 -46835425 + AluJb SINE Alu 1 291 -21 577 291 113 0 chr5 152794881 152795032 -46835118 - MIR SINE MIR -93 169 2 388 260 31 47 chr5 152795459 152795586 -46834564 - L2 LINE L2 0 3272 3148 2094 141 141 5 chr5 152795622 152795999 -46834151 + MSTA LTR MaLR 1 428 0 8199 184 119 15 chr5 152796178 152797768 -46832382 - MER52A LTR ERV1 0 1755 1 1483 227 67 30 chr5 152798076 152798437 -46831713 - MLT1A2 LTR MaLR 0 374 1 321 218 37 28 chr5 152799536 152799647 -46830503 + MIR SINE MIR 52 158 -68 367 0 0 0 chr5 152799647 152799687 -46830463 + THE1C LTR MaLR 1 40 -335 346 254 26 18 chr5 152799691 152799735 -46830415 + MIR SINE MIR 148 190 -72 1703 176 10 0 chr5 152799735 152800025 -46830125 + AluJo SINE Alu 1 293 -19 346 254 26 18 chr5 152800025 152800094 -46830056 + MIR SINE MIR 190 262 0 471 344 21 5 chr5 152800941 152801127 -46829023 - MER5A DNA MER1_type 0 189 1 278 219 12 37 chr5 152801145 152801227 -46828923 - LTR16C LTR ERVL -2 489 410 2407 64 0 0 chr5 152802645 152802941 -46827209 - AluY SINE Alu -15 296 1 2111 109 13 0 chr5 152803159 152803462 -46826688 + AluSx SINE Alu 1 307 -5 232 265 60 48 chr5 152803649 152803732 -46826418 + L3 LINE CR1 1491 1574 -3 232 234 0 65 chr5 152803844 152803921 -46826229 - LTR67 LTR ERVL -2 555 484 * 1002 295 118 25 chr5 152803852 152804003 -46826147 - MLT1K LTR MaLR -10 578 442 204 40 0 0 chr5 152804003 152804028 -46826122 + (TG)n Simple_repeat Simple_repeat 2 26 0 1002 295 118 25 chr5 152804028 152804391 -46825759 - MLT1K LTR MaLR -146 442 16 2982 119 125 8 chr5 152805410 152805882 -46824268 + MER1A DNA MER1_type 1 527 0 204 138 0 0 chr5 152805889 152805918 -46824232 + MIR3 SINE MIR 161 189 -19 2321 87 0 0 chr5 152805949 152806249 -46823901 - AluY SINE Alu -11 300 1 911 235 55 17 chr5 152806309 152806547 -46823603 - MIR SINE MIR -8 254 8 1463 146 101 58 chr5 152806694 152807024 -46823126 + L1MA9 LINE L1 5919 6268 -44 2316 67 3 10 chr5 152807024 152807321 -46822829 - AluSp SINE Alu -18 295 1 1463 146 101 58 chr5 152807321 152807367 -46822783 + L1MA9 LINE L1 6268 6311 -1 2389 69 0 3 chr5 152809281 152809587 -46820563 + AluY SINE Alu 1 305 -6 1811 137 0 18 chr5 152809756 152810081 -46820069 + AluSx SINE Alu 6 325 0 446 226 94 92 chr5 152810163 152810361 -46819789 + MIR SINE MIR 6 211 -51 385 246 123 12 chr5 152810556 152810727 -46819423 + MER113 DNA MER1_type? 9 198 -323 540 158 50 0 chr5 152810808 152810909 -46819241 + MER5A DNA MER1_type 7 112 -77 183 176 29 0 chr5 152810900 152810934 -46819216 - MER5A DNA MER1_type -113 76 42 * 191 281 0 53 chr5 152810992 152811049 -46819101 + MIR3 SINE MIR 131 184 -24 651 202 9 0 chr5 152811049 152811163 -46818987 + FLAM_A SINE Alu 12 126 -16 1315 136 0 14 chr5 152811497 152811717 -46818433 - AluJo SINE Alu -11 301 85 253 97 0 0 chr5 152811717 152811748 -46818402 - Alu SINE Alu -52 250 220 1832 112 0 4 chr5 152811748 152812017 -46818133 - AluY SINE Alu -43 268 1 1191 62 0 0 chr5 152812017 152812161 -46817989 - AluY SINE Alu -167 144 1 289 300 25 50 chr5 152813419 152813539 -46816611 + L2 LINE L2 3182 3298 -15 253 273 147 76 chr5 152813738 152814105 -46816045 - L2 LINE L2 0 3313 2921 1233 245 162 8 chr5 152814510 152814881 -46815269 - MLT1J2 LTR MaLR 0 450 23 2387 68 0 0 chr5 152815079 152815373 -46814777 - AluY SINE Alu -17 294 1 1900 138 3 0 chr5 152815385 152815682 -46814468 - AluSx SINE Alu -9 303 6 591 300 35 18 chr5 152816434 152816604 -46813546 - MIR SINE MIR -74 188 16 * 1229 274 22 8 chr5 152816601 152816959 -46813191 + L2 LINE L2 2329 2691 -623 634 271 67 47 chr5 152816960 152817259 -46812891 - MLT1J LTR MaLR -112 399 95 467 314 78 12 chr5 152817298 152817540 -46812610 - L2 LINE L2 -652 2662 2405 206 247 129 12 chr5 152818305 152818390 -46811760 - MIR SINE MIR -116 146 52 272 276 54 84 chr5 152818493 152818698 -46811452 + MIR SINE MIR 20 215 -47 189 333 0 30 chr5 152819873 152819939 -46810211 - L2 LINE L2 0 3313 3250 681 256 137 14 chr5 152819955 152820174 -46809976 + MIR SINE MIR 3 248 -14 610 283 40 26 chr5 152820219 152820445 -46809705 - L2 LINE L2 -12 3301 3073 332 245 94 50 chr5 152820459 152820618 -46809532 + L2 LINE L2 2912 3077 -236 2089 106 0 0 chr5 152820715 152821028 -46809122 - AluSx SINE Alu 0 313 1 313 294 24 0 chr5 152821125 152821210 -46808940 + MIR SINE MIR 20 106 -156 576 348 108 14 chr5 152823391 152823968 -46806182 + L2 LINE L2 1636 2266 -1048 790 328 55 3 chr5 152823971 152824282 -46805868 - MER102b DNA MER1_type 0 341 15 291 312 119 61 chr5 152824303 152824630 -46805520 + L2 LINE L2 2286 2631 -683 817 278 52 81 chr5 152824682 152824829 -46805321 + MLT1L LTR MaLR 150 300 -315 2115 129 3 0 chr5 152824829 152825138 -46805012 + AluSq SINE Alu 1 310 -3 817 278 52 81 chr5 152825138 152825469 -46804681 + MLT1L LTR MaLR 300 614 -1 407 262 19 0 chr5 152825753 152825856 -46804294 - L2 LINE L2 -1 3312 3208 1200 106 181 0 chr5 152825992 152826191 -46803959 - MER46A DNA MER2_type -1 235 1 1838 138 3 14 chr5 152826218 152826545 -46803605 - AluSx SINE Alu 0 312 1 376 255 85 85 chr5 152826551 152826681 -46803469 - L1MC4 LINE L1 -1 8041 7909 378 0 0 0 chr5 152826681 152826723 -46803427 + (CA)n Simple_repeat Simple_repeat 1 42 0 376 255 85 85 chr5 152826723 152826827 -46803323 - L1MC4 LINE L1 -132 7910 7807 2624 39 0 0 chr5 152826828 152827138 -46803012 + AluY SINE Alu 1 310 -1 511 140 9 75 chr5 152827149 152827256 -46802894 + FAM SINE Alu 40 139 -46 236 214 51 60 chr5 152827256 152827373 -46802777 - L1MC4 LINE L1 -218 7824 7709 337 275 0 0 chr5 152827575 152827655 -46802495 + L2 LINE L2 3191 3270 -2 233 267 89 84 chr5 152828526 152828717 -46801433 - L2 LINE L2 -53 3219 3028 21 0 0 0 chr5 152830949 152830970 -46799180 + AT_rich Low_complexity Low_complexity 1 21 0 1910 96 4 4 chr5 152831358 152831619 -46798531 - AluSx SINE Alu -49 263 3 1553 176 84 0 chr5 152832186 152832459 -46797691 - AluJb SINE Alu -6 296 1 2105 108 10 41 chr5 152832821 152833135 -46797015 - AluSx SINE Alu -8 304 1 396 177 0 0 chr5 152834339 152834401 -46795749 - MER20 DNA MER1_type 0 219 158 210 233 0 0 chr5 152834401 152834461 -46795689 + (TGG)n Simple_repeat Simple_repeat 1 60 0 517 226 6 94 chr5 152834475 152834634 -46795516 - MER20 DNA MER1_type -69 150 6 651 132 19 0 chr5 152834728 152834834 -46795316 - AluSx SINE Alu 0 312 205 816 105 0 0 chr5 152834835 152834940 -46795210 - AluSx SINE Alu -208 105 1 2172 111 0 0 chr5 152835634 152835914 -46794236 - AluSx SINE Alu -32 280 1 213 211 18 0 chr5 152835940 152835997 -46794153 - L2 LINE L2 -238 3034 2977 507 320 139 20 chr5 152836041 152836335 -46793815 - L2 LINE L2 -339 2975 2647 845 216 14 106 chr5 152836492 152836644 -46793506 - MLT1C LTR MaLR -152 315 199 2356 96 3 10 chr5 152836644 152836958 -46793192 - AluSx SINE Alu 0 312 1 845 216 14 106 chr5 152836958 152837088 -46793062 - MLT1C LTR MaLR -268 199 59 445 258 109 16 chr5 152837225 152837353 -46792797 + MER102a DNA MER1_type 189 328 -2 277 103 17 52 chr5 152838587 152838645 -46791505 + L2 LINE L2 3258 3313 0 593 271 24 35 chr5 152839002 152839166 -46790984 - L1MC4a LINE L1 -248 5916 5785 1242 148 88 0 chr5 152839166 152839383 -46790767 - MER46A DNA MER2_type 0 236 1 593 271 24 35 chr5 152839383 152839512 -46790638 - L1MC4a LINE L1 -379 5785 5656 1377 169 63 100 chr5 152839789 152840168 -46789982 + MLT1A1 LTR MaLR 1 365 0 2496 80 0 10 chr5 152840744 152841056 -46789094 + AluSc SINE Alu 1 309 0 347 301 119 0 chr5 152841580 152841773 -46788377 + MIR SINE MIR 29 244 -18 2383 151 47 19 chr5 152841855 152842374 -46787776 + MLT2A2 LTR ERVL 1 554 0 2221 128 0 0 chr5 152842496 152842801 -46787349 - AluSx SINE Alu -7 305 1 2387 78 3 0 chr5 152843094 152843387 -46786763 + AluSp SINE Alu 1 294 -19 259 321 127 24 chr5 152845339 152845504 -46784646 - MER5A DNA MER1_type -1 188 7 257 245 0 51 chr5 152846979 152847077 -46783073 + T-rich Low_complexity Low_complexity 2 94 0 412 213 74 9 chr5 152847758 152847866 -46782284 + MIR3 SINE MIR 15 129 -79 405 165 88 22 chr5 152847869 152847960 -46782190 + L2 LINE L2 3199 3295 -18 556 192 33 0 chr5 152847977 152848097 -46782053 + MIR SINE MIR 12 135 -127 1165 255 132 23 chr5 152848132 152848571 -46781579 - MLT1D LTR MaLR -18 487 1 270 261 0 45 chr5 152848571 152848659 -46781491 + MIR SINE MIR 169 252 -10 819 165 0 0 chr5 152848686 152848813 -46781337 - FLAM_A SINE Alu -2 131 5 261 196 71 0 chr5 152848871 152848927 -46781223 + MIR SINE MIR 201 260 -2 257 301 12 24 chr5 152848921 152849004 -46781146 - L2 LINE L2 -2 3311 3230 * 252 0 0 0 chr5 152849312 152849340 -46780810 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 909 300 44 41 chr5 152850562 152851146 -46779004 + L2 LINE L2 2727 3311 -2 1029 282 27 17 chr5 152851330 152851831 -46778319 - MLT1L LTR MaLR 0 615 76 2837 173 11 2 chr5 152852799 152853267 -46776883 - MER70A LTR ERVL 0 472 1 200 104 83 21 chr5 152853311 152853359 -46776791 + T-rich Low_complexity Low_complexity 4 54 0 2202 49 0 0 chr5 152853475 152853742 -46776408 - L1PA4 LINE L1 -3 6152 5886 1399 41 0 6 chr5 152853743 152853914 -46776236 + L1PA4 LINE L1 5707 5876 -279 2099 124 164 11 chr5 152853999 152854370 -46775780 + MSTA LTR MaLR 1 428 0 10286 118 7 36 chr5 152854372 152855998 -46774152 + MSTA-int LTR MaLR 3 1580 0 724 132 0 0 chr5 152856010 152856116 -46774034 + MSTA LTR MaLR 323 428 0 684 287 67 50 chr5 152856211 152856999 -46773151 - L1ME2 LINE L1 -241 5923 5111 2050 122 3 3 chr5 152856999 152857287 -46772863 - AluSx SINE Alu -4 308 21 684 287 67 50 chr5 152857287 152857500 -46772650 - L1ME2 LINE L1 -1053 5111 4903 229 344 15 23 chr5 152857618 152857749 -46772401 - MER5A DNA MER1_type -1 188 59 2010 98 36 0 chr5 152857751 152858015 -46772135 - L1PB1 LINE L1 -7 6144 5775 234 0 0 0 chr5 152858015 152858041 -46772109 + (TG)n Simple_repeat Simple_repeat 2 27 0 2010 98 36 0 chr5 152858041 152858111 -46772039 - L1PB1 LINE L1 -376 5775 5709 2320 110 3 0 chr5 152858258 152858566 -46771584 - AluSc SINE Alu 0 309 1 201 316 13 26 chr5 152860186 152860262 -46769888 - MIR SINE MIR -187 75 1 1479 73 0 21 chr5 152860509 152860701 -46769449 + AluY SINE Alu 118 305 -6 1732 309 82 20 chr5 152860802 152861047 -46769103 + L2 LINE L2 1646 1874 -1440 1747 153 7 39 chr5 152861047 152861209 -46768941 - AluJb SINE Alu -15 297 148 2413 51 27 3 chr5 152861209 152861505 -46768645 - AluY SINE Alu -8 303 1 1747 153 7 39 chr5 152861505 152861649 -46768501 - AluJb SINE Alu -164 148 1 1732 309 82 20 chr5 152861649 152862408 -46767742 + L2 LINE L2 1874 2712 -602 1060 79 0 0 chr5 152862409 152862536 -46767614 + AluSq/x SINE Alu 1 127 -186 1269 255 104 5 chr5 152862551 152862983 -46767167 + L1 LINE L1 2382 2856 -3290 2385 55 7 7 chr5 152862984 152863276 -46766874 + AluY SINE Alu 1 292 -19 343 285 125 14 chr5 152863454 152863598 -46766552 + L2 LINE L2 3153 3312 -1 608 300 40 15 chr5 152863704 152863904 -46766246 - MIR SINE MIR -42 220 16 354 278 46 23 chr5 152864123 152864296 -46765854 + L1 LINE L1 4882 5058 -1088 1076 110 0 0 chr5 152864300 152864436 -46765714 + AluSq/x SINE Alu 1 136 -176 1944 96 23 73 chr5 152864436 152864737 -46765413 + AluSg SINE Alu 1 286 -24 21 0 0 0 chr5 152864737 152864758 -46765392 + AT_rich Low_complexity Low_complexity 1 21 0 1432 202 44 105 chr5 152866147 152866176 -46763974 - L1MC5 LINE L1 -476 7485 7456 2255 101 0 3 chr5 152866176 152866472 -46763678 + AluSq SINE Alu 1 295 -18 1432 202 44 105 chr5 152866472 152866750 -46763400 - L1MC5 LINE L1 -505 7456 7163 2279 79 0 0 chr5 152866750 152867054 -46763096 - AluY SINE Alu 0 304 1 1432 202 44 105 chr5 152867054 152867232 -46762918 - L1MC5 LINE L1 -798 7163 7032 2429 94 0 3 chr5 152867232 152867540 -46762610 - AluSg SINE Alu -3 307 1 1432 202 44 105 chr5 152867540 152867595 -46762555 - L1MC5 LINE L1 -929 7032 6975 412 267 108 9 chr5 152867672 152867809 -46762341 - MLT1H LTR MaLR -349 200 12 256 320 36 52 chr5 152868468 152868662 -46761488 - L1 LINE L1 -1071 5075 4885 255 61 0 0 chr5 152868732 152868765 -46761385 + (CA)n Simple_repeat Simple_repeat 1 33 0 229 326 71 0 chr5 152868908 152869006 -46761144 - LTR67 LTR ERVL -385 172 68 620 247 27 73 chr5 152869171 152869390 -46760760 - MIR SINE MIR -6 256 48 2381 81 10 0 chr5 152869642 152869937 -46760213 + AluSx SINE Alu 3 300 -12 282 304 143 84 chr5 152870743 152871029 -46759121 - L2 LINE L2 -1 3271 2969 434 251 5 126 chr5 152871139 152871189 -46758961 + MER5A DNA MER1_type 7 61 -128 1250 180 115 50 chr5 152871189 152871258 -46758892 - MER2 DNA MER2_type 0 344 281 2213 122 0 7 chr5 152871258 152871561 -46758589 + AluSq SINE Alu 1 301 -12 1250 180 115 50 chr5 152871561 152871814 -46758336 - MER2 DNA MER2_type -63 281 1 434 251 5 126 chr5 152871814 152871830 -46758320 + MER5A DNA MER1_type 61 77 -112 2445 86 0 3 chr5 152871830 152872134 -46758016 + AluSq SINE Alu 1 303 -10 434 251 5 126 chr5 152872134 152872273 -46757877 + MER5A DNA MER1_type 77 188 -1 298 263 17 85 chr5 152872315 152872433 -46757717 - MIR SINE MIR -61 201 92 639 273 45 53 chr5 152872587 152872851 -46757299 + MIR SINE MIR 1 262 0 739 201 25 14 chr5 152872985 152873147 -46757003 + L1MC4 LINE L1 6686 6888 -1142 1839 174 0 0 chr5 152873147 152873440 -46756710 + AluJb SINE Alu 1 293 -19 1888 128 18 115 chr5 152873483 152873867 -46756283 - MER7A DNA MER2_type 0 346 2 252 243 16 0 chr5 152873875 152873955 -46756195 + MER21B LTR ERV1 8 89 -774 2972 208 41 64 chr5 152874079 152874689 -46755461 + MER21B LTR ERV1 103 694 -169 2400 75 0 0 chr5 152874689 152875014 -46755136 - AluSc SINE Alu 0 325 1 2972 208 41 64 chr5 152875014 152875181 -46754969 + MER21B LTR ERV1 694 863 0 1683 236 63 106 chr5 152875191 152875355 -46754795 + L1MC4 LINE L1 6894 7064 -978 2329 76 17 0 chr5 152875355 152875643 -46754507 + AluY SINE Alu 11 303 -8 1683 236 63 106 chr5 152875643 152875854 -46754296 + L1MC4 LINE L1 7064 7283 -759 2779 0 3 3 chr5 152875854 152876152 -46753998 - AluYa5 SINE Alu -13 298 1 1683 236 63 106 chr5 152876152 152876589 -46753561 + L1MC4 LINE L1 7283 7672 -370 1745 146 55 3 chr5 152876641 152876950 -46753200 + L1MB7 LINE L1 5841 6165 -19 2488 76 0 0 chr5 152877007 152877309 -46752841 + AluSc SINE Alu 1 302 -7 303 111 111 0 chr5 152877311 152877383 -46752767 + L1MC4 LINE L1 7690 7769 -273 526 123 18 61 chr5 152877493 152877607 -46752543 + Tigger2a DNA MER2_type 1 109 -325 375 233 0 0 chr5 152877607 152877710 -46752440 + CT-rich Low_complexity Low_complexity 1 103 0 1890 170 75 18 chr5 152877733 152878133 -46752017 + Tigger2 DNA MER2_type 2296 2718 0 258 253 46 0 chr5 152878133 152878220 -46751930 + L1MC4 LINE L1 7952 8042 0 2167 107 0 4 chr5 152879886 152880199 -46749951 - AluSx SINE Alu 0 314 3 245 259 120 9 chr5 152882015 152882123 -46748027 + L2 LINE L2 3179 3298 -15 1260 270 168 18 chr5 152882295 152883205 -46746945 - L2 LINE L2 -2 3311 2268 883 253 11 70 chr5 152884363 152884648 -46745502 + MLT1J LTR MaLR 1 268 -243 286 235 167 20 chr5 152884700 152884802 -46745348 + MLT1J LTR MaLR 389 505 -6 2371 76 0 7 chr5 152885138 152885439 -46744711 - AluY SINE Alu -12 299 1 605 261 92 49 chr5 152885689 152885995 -46744155 - L1MC4a LINE L1 -1884 5924 5606 601 114 23 0 chr5 152886306 152886394 -46743756 + AluJb SINE Alu 207 296 -16 461 300 120 4 chr5 152887927 152888160 -46741990 - MIR SINE MIR -2 260 1 471 245 227 0 chr5 152888399 152888562 -46741588 - MIR SINE MIR -4 258 59 1517 149 67 37 chr5 152888871 152889183 -46740967 - AluJb SINE Alu 0 328 9 267 247 56 0 chr5 152889459 152889548 -46740602 + MIR SINE MIR 28 121 -141 282 235 53 91 chr5 152890536 152890723 -46739427 - L1MC4a LINE L1 -105 6016 5835 1038 78 0 0 chr5 152890753 152890881 -46739269 + AluSp/q SINE Alu 174 301 -12 29 0 0 0 chr5 152891217 152891246 -46738904 + AT_rich Low_complexity Low_complexity 1 29 0 1820 182 0 22 chr5 152891304 152891623 -46738527 + AluJo SINE Alu 1 312 0 306 219 24 49 chr5 152892607 152892689 -46737461 + MLT1L LTR MaLR 1 80 -535 704 246 99 108 chr5 152892754 152892774 -46737376 + MLT1L LTR MaLR 119 138 -477 1793 172 48 63 chr5 152892774 152893003 -46737147 - MLT1B LTR MaLR 0 390 168 2209 142 0 0 chr5 152893003 152893312 -46736838 - AluSq SINE Alu -4 309 1 1793 172 48 63 chr5 152893312 152893478 -46736672 - MLT1B LTR MaLR -222 168 1 704 246 99 108 chr5 152893478 152893879 -46736271 + MLT1L LTR MaLR 138 613 -2 1884 151 3 28 chr5 152893964 152894283 -46735867 + AluJo SINE Alu 1 311 -1 522 313 30 22 chr5 152894924 152895154 -46734996 + MIR SINE MIR 31 262 0 2273 92 7 7 chr5 152895205 152895500 -46734650 - AluSc SINE Alu -14 295 1 1037 224 199 14 chr5 152895518 152895804 -46734346 - L1MD3 LINE L1 -12 7983 7645 2392 81 3 13 chr5 152895935 152896243 -46733907 - AluSp SINE Alu -8 305 1 317 287 0 11 chr5 152896266 152896360 -46733790 - MIR SINE MIR -77 185 93 4031 141 8 17 chr5 152896439 152896827 -46733323 - MER39B LTR ERV1 0 653 263 2336 72 0 53 chr5 152896827 152897148 -46733002 - AluY SINE Alu -7 304 1 2258 124 3 0 chr5 152897148 152897454 -46732696 - AluSx SINE Alu -5 307 1 4031 141 8 17 chr5 152897454 152897723 -46732427 - MER39B LTR ERV1 -388 265 1 2312 68 7 36 chr5 152898901 152899210 -46730940 + AluSp SINE Alu 1 300 -13 24 0 0 0 chr5 152900253 152900277 -46729873 + AT_rich Low_complexity Low_complexity 1 24 0 1073 222 18 5 chr5 152900448 152900669 -46729481 - MLT1E2 LTR MaLR -88 538 315 2523 82 0 0 chr5 152901060 152901365 -46728785 + AluY SINE Alu 1 305 -6 1089 199 28 130 chr5 152901369 152901452 -46728698 - L1ME1 LINE L1 -4 6162 6072 2382 93 0 10 chr5 152901452 152901764 -46728386 + AluSg SINE Alu 1 309 -1 1089 199 28 130 chr5 152901764 152902016 -46728134 - L1ME1 LINE L1 -94 6072 5880 2290 99 3 10 chr5 152902016 152902318 -46727832 - AluSx SINE Alu -12 300 1 1089 199 28 130 chr5 152902318 152902418 -46727732 - L1ME1 LINE L1 -286 5880 5771 837 166 32 0 chr5 152902418 152902575 -46727575 - L1M4 LINE L1 -2364 3782 3621 2183 101 0 7 chr5 152902938 152903234 -46726916 - AluSc SINE Alu -15 294 1 2325 105 0 0 chr5 152904175 152904470 -46725680 + AluSq SINE Alu 2 296 -17 367 262 57 25 chr5 152904674 152904796 -46725354 + MIR SINE MIR 28 153 -55 2573 55 3 3 chr5 152905282 152905593 -46724557 + AluY SINE Alu 1 311 0 716 191 0 0 chr5 152907259 152907385 -46722765 + L1PA16 LINE L1 6039 6164 -2 2296 89 24 0 chr5 152907462 152907753 -46722397 + AluSx SINE Alu 1 298 -14 1681 191 85 21 chr5 152907781 152908159 -46721991 - L1MD2 LINE L1 -229 6130 5729 2456 179 22 34 chr5 152908177 152908579 -46721571 - L1MB4 LINE L1 0 6180 5775 2500 56 0 7 chr5 152908579 152908885 -46721265 - AluY SINE Alu -7 304 1 2456 179 22 34 chr5 152908885 152909008 -46721142 - L1MB4 LINE L1 -405 5775 5659 1692 163 34 34 chr5 152909008 152909303 -46720847 - AluJb SINE Alu -15 297 3 594 165 0 9 chr5 152909311 152909412 -46720738 - AluJb SINE Alu -10 302 201 259 186 14 14 chr5 152910558 152910628 -46719522 + (TG)n Simple_repeat Simple_repeat 2 71 0 589 276 123 4 chr5 152911065 152911293 -46718857 - MIR SINE MIR 0 262 8 274 154 0 0 chr5 152911368 152911407 -46718743 + L1M3 LINE L1 5730 5768 -403 2204 92 27 0 chr5 152911956 152912248 -46717902 - AluSp SINE Alu -11 302 3 333 293 156 30 chr5 152912340 152912603 -46717547 - L1MEd LINE L1 -4872 1247 952 2504 57 0 3 chr5 152912604 152912904 -46717246 - AluY SINE Alu -12 299 1 28 0 0 0 chr5 152913002 152913030 -46717120 + AT_rich Low_complexity Low_complexity 1 28 0 2784 76 42 87 chr5 152913074 152913547 -46716603 - L1PA14 LINE L1 0 6161 5710 574 225 0 0 chr5 152913552 152913672 -46716478 - L1ME1 LINE L1 -38 6128 6009 * 1453 262 29 56 chr5 152913668 152914223 -46715927 - L1ME LINE L1 -4939 1089 646 2282 103 13 13 chr5 152914223 152914534 -46715616 + AluY SINE Alu 1 311 0 1453 262 29 56 chr5 152914534 152914786 -46715364 - L1ME LINE L1 -5382 646 389 231 36 0 0 chr5 152914942 152914970 -46715180 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 307 337 52 41 chr5 152915035 152915403 -46714747 - L1ME LINE L1 -5610 460 89 984 267 79 90 chr5 152915511 152916267 -46713883 - L1MEd LINE L1 -5156 963 216 1990 201 12 38 chr5 152916389 152916423 -46713727 - MLT2D LTR ERVL -8 406 373 294 73 0 0 chr5 152916423 152916464 -46713686 + (TG)n Simple_repeat Simple_repeat 1 41 0 1990 201 12 38 chr5 152916464 152916567 -46713583 - MLT2D LTR ERVL -41 373 269 850 194 6 18 chr5 152916567 152916732 -46713418 + FRAM SINE Alu 4 166 0 1990 201 12 38 chr5 152916732 152917010 -46713140 - MLT2D LTR ERVL -145 269 1 321 299 26 19 chr5 152917051 152917205 -46712945 - L1MC5 LINE L1 -306 7655 7501 3379 250 56 51 chr5 152917209 152918087 -46712063 + HAL1 LINE L1 1122 2011 -496 2276 101 0 0 chr5 152918087 152918385 -46711765 - AluY SINE Alu -13 298 1 3379 250 56 51 chr5 152918385 152918885 -46711265 + HAL1 LINE L1 2011 2507 0 1846 137 34 27 chr5 152918909 152919202 -46710948 - AluJb SINE Alu -13 299 5 1097 179 25 5 chr5 152919340 152919541 -46710609 - MER3 DNA MER1_type -3 206 2 751 313 8 23 chr5 152919600 152919856 -46710294 + MIR SINE MIR 2 253 -9 249 83 0 0 chr5 152919869 152919905 -46710245 + (TCC)n Simple_repeat Simple_repeat 2 37 0 919 311 68 13 chr5 152920006 152920386 -46709764 + LTR16C LTR ERVL 90 490 -1 186 189 0 0 chr5 152920387 152920424 -46709726 + (CAT)n Simple_repeat Simple_repeat 2 38 0 2405 107 0 0 chr5 152920434 152920744 -46709406 - AluSx SINE Alu -2 310 1 276 390 0 6 chr5 152921092 152921251 -46708899 - MIR SINE MIR 0 262 105 1811 167 65 40 chr5 152921817 152922171 -46707979 - MLT1A1 LTR MaLR 0 365 3 2085 125 7 13 chr5 152922494 152922798 -46707352 - AluSx SINE Alu -3 309 8 292 219 122 112 chr5 152923783 152923979 -46706171 + L2 LINE L2 2825 3022 -250 270 246 14 0 chr5 152924334 152924403 -46705747 - MER113 DNA MER1_type? -446 75 6 221 241 205 18 chr5 152924422 152924534 -46705616 + L2 LINE L2 3180 3312 -1 334 318 34 57 chr5 152924716 152925102 -46705048 - L3 LINE CR1 -301 1276 827 912 256 29 8 chr5 152925162 152925400 -46704750 - MIR SINE MIR 0 262 20 905 245 71 65 chr5 152925654 152926248 -46703902 + LTR41 LTR ERVL 1 773 0 1999 113 19 0 chr5 152926269 152926535 -46703615 + AluSx SINE Alu 1 271 -41 434 140 0 53 chr5 152926569 152926683 -46703467 + (TTTC)n Simple_repeat Simple_repeat 4 111 0 399 41 0 0 chr5 152926715 152926764 -46703386 + (CCCTG)n Simple_repeat Simple_repeat 2 50 0 646 150 71 0 chr5 152926768 152926881 -46703269 - AluSg/x SINE Alu 0 312 192 2391 91 0 3 chr5 152926920 152927228 -46702922 + AluSc SINE Alu 1 307 -2 269 122 24 0 chr5 152929438 152929479 -46700671 - MER112 DNA MER1_type -1 259 218 297 223 10 78 chr5 152929557 152929660 -46700490 - MER112 DNA MER1_type -151 109 14 249 262 49 0 chr5 152931191 152931252 -46698898 + L2 LINE L2 3246 3309 -4 182 202 71 107 chr5 152932442 152932526 -46697624 + MER5A DNA MER1_type 30 110 -79 526 253 163 0 chr5 152933765 152933931 -46696219 + MIR SINE MIR 70 262 0 1255 200 0 0 chr5 152934408 152934628 -46695522 + AluJo SINE Alu 1 220 -92 255 111 0 0 chr5 152934628 152934664 -46695486 + FLAM SINE Alu 86 121 -12 1559 187 33 40 chr5 152934681 152934981 -46695169 + AluJo SINE Alu 1 298 -14 319 246 108 24 chr5 152935030 152935197 -46694953 - HAL1b LINE L1 -57 1291 1111 858 279 53 42 chr5 152935206 152935640 -46694510 + L1MB8 LINE L1 5374 5812 -1996 235 336 95 17 chr5 152935964 152936080 -46694070 + L2 LINE L2 3123 3247 -25 21 0 0 0 chr5 152936253 152936274 -46693876 + AT_rich Low_complexity Low_complexity 1 21 0 283 213 96 59 chr5 152936695 152936831 -46693319 - L1ME4a LINE L1 -11 6110 5970 1832 148 52 0 chr5 152938314 152938604 -46691546 + AluJo SINE Alu 1 305 -7 189 0 0 0 chr5 152938612 152938633 -46691517 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 1453 117 9 0 chr5 152939755 152939969 -46690181 + MER20 DNA MER1_type 1 216 -3 2432 92 0 0 chr5 152940388 152940694 -46689456 - AluSg SINE Alu -4 306 1 397 266 38 43 chr5 152940889 152941073 -46689077 - L1MC4a LINE L1 -1877 5931 5749 436 253 49 117 chr5 152941362 152941848 -46688302 + L2 LINE L2 2858 3310 -3 226 272 64 37 chr5 152941973 152942108 -46688042 + MIR3 SINE MIR 51 196 -12 1659 188 41 11 chr5 152942131 152942498 -46687652 + L1MB8 LINE L1 5792 6169 -9 230 158 0 0 chr5 152942618 152942656 -46687494 - L2 LINE L2 -20 3293 3256 345 286 168 10 chr5 152942673 152942804 -46687346 + MIR SINE MIR 1 152 -56 2145 118 3 43 chr5 152943318 152943640 -46686510 - AluSx SINE Alu -3 309 1 330 26 0 0 chr5 152944437 152944476 -46685674 + (TG)n Simple_repeat Simple_repeat 2 40 0 1885 104 4 26 chr5 152944598 152944868 -46685282 + AluSg SINE Alu 38 301 -9 244 120 0 0 chr5 152946715 152946765 -46683385 - LTR66 LTR ERVL -163 447 398 423 119 0 0 chr5 152946768 152946835 -46683315 + (TA)n Simple_repeat Simple_repeat 1 67 0 391 81 0 58 chr5 152946928 152947015 -46683135 + (TA)n Simple_repeat Simple_repeat 2 83 0 567 262 53 39 chr5 152947934 152948140 -46682010 - MIR SINE MIR 0 262 54 252 130 43 0 chr5 152948388 152948434 -46681716 + L2 LINE L2 3217 3264 -8 344 294 46 39 chr5 152948476 152948629 -46681521 - L2 LINE L2 -2 3311 3158 244 289 0 60 chr5 152949553 152949636 -46680514 - MIR SINE MIR -91 171 94 530 250 41 6 chr5 152950137 152950309 -46679841 - MIR SINE MIR 0 262 85 2267 87 13 20 chr5 152953440 152953739 -46676411 - AluSg SINE Alu -13 297 1 447 269 60 33 chr5 152953856 152954038 -46676112 - MIR SINE MIR -66 196 10 219 238 7 26 chr5 152954828 152954922 -46675228 + CT-rich Low_complexity Low_complexity 1 152 0 2195 125 0 0 chr5 152955300 152955596 -46674554 + AluSx SINE Alu 1 296 -16 211 300 113 20 chr5 152956557 152956707 -46673443 + MIR SINE MIR 70 233 -29 24 0 0 0 chr5 152956778 152956802 -46673348 + AT_rich Low_complexity Low_complexity 1 24 0 2610 58 0 6 chr5 152957131 152957444 -46672706 - AluY SINE Alu 0 311 1 1816 76 4 8 chr5 152957839 152958076 -46672074 + AluSp SINE Alu 78 313 0 1460 234 33 50 chr5 152958230 152958346 -46671804 + L1M4 LINE L1 2214 2330 -3816 2442 65 0 3 chr5 152958346 152958639 -46671511 + AluY SINE Alu 1 292 -19 1460 234 33 50 chr5 152958639 152959065 -46671085 + L1M4 LINE L1 2330 2747 -3399 271 335 104 38 chr5 152959152 152959468 -46670682 + L2 LINE L2 2512 2848 -466 297 221 0 0 chr5 152959553 152959621 -46670529 + CT-rich Low_complexity Low_complexity 2 69 0 613 262 119 95 chr5 152959859 152960406 -46669744 + L2 LINE L2 2727 3272 0 184 339 110 8 chr5 152960429 152960547 -46669603 + L2 LINE L2 3138 3267 -5 454 254 65 70 chr5 152961163 152961348 -46668802 - MER63A DNA MER1_type 0 210 27 382 248 152 8 chr5 152961361 152961486 -46668664 + MIR SINE MIR 38 180 -82 2317 90 0 13 chr5 152961561 152961861 -46668289 - AluSx SINE Alu -16 296 1 1913 128 3 69 chr5 152961959 152962130 -46668020 - AluJo SINE Alu -14 298 156 2423 89 0 0 chr5 152962130 152962433 -46667717 - AluSq SINE Alu -10 303 1 1913 128 3 69 chr5 152962433 152962580 -46667570 - AluJo SINE Alu -156 156 1 1222 220 79 20 chr5 152963007 152963312 -46666838 + MER46C DNA MER2_type 11 333 -5 270 0 0 0 chr5 152963527 152963557 -46666593 + (CA)n Simple_repeat Simple_repeat 2 31 0 268 252 126 10 chr5 152964263 152964366 -46665784 - MIR SINE MIR 0 262 148 195 208 21 0 chr5 152964520 152964568 -46665582 - MIR SINE MIR -117 145 97 347 74 15 20 chr5 152964568 152964635 -46665515 - MADE1 DNA Mariner -34 46 1 384 318 56 0 chr5 152965072 152965292 -46664858 + MIR SINE MIR 27 262 0 2240 105 0 3 chr5 152966434 152966719 -46663431 + AluSg SINE Alu 1 284 -26 1755 159 0 27 chr5 152967368 152967669 -46662481 - AluJo SINE Alu -19 293 1 541 107 83 190 chr5 152967942 152968066 -46662084 + MER96B DNA MER1_type? 231 367 -50 263 28 28 0 chr5 152968066 152968102 -46662048 + (TA)n Simple_repeat Simple_repeat 1 37 0 2322 94 3 0 chr5 152968102 152968399 -46661751 - AluY SINE Alu -13 298 1 541 107 83 190 chr5 152968399 152968478 -46661672 + MER96B DNA MER1_type? 365 413 -4 605 305 87 24 chr5 152968553 152969270 -46660880 + L2 LINE L2 2552 3311 -2 21 0 0 0 chr5 152969964 152969985 -46660165 + AT_rich Low_complexity Low_complexity 1 21 0 2329 80 17 7 chr5 152969987 152970286 -46659864 - AluSx SINE Alu -10 302 1 809 281 116 8 chr5 152970294 152970647 -46659503 + MER113 DNA MER1_type? 128 518 -3 486 238 95 110 chr5 152971042 152971128 -46659022 - L1ME LINE L1 -303 5818 5732 2097 93 0 4 chr5 152971128 152971396 -46658754 - AluSc SINE Alu -15 294 28 486 238 95 110 chr5 152971396 152971589 -46658561 - L1ME LINE L1 -389 5732 5541 2562 48 0 32 chr5 152972107 152972419 -46657731 + AluY SINE Alu 1 302 -9 416 270 113 18 chr5 152972676 152972897 -46657253 + MIR SINE MIR 19 260 -2 720 205 98 62 chr5 152973294 152973538 -46656612 + MIR SINE MIR 5 257 -5 317 296 75 83 chr5 152974667 152974920 -46655230 - L2 LINE L2 0 3272 3022 2371 87 3 3 chr5 152975524 152975823 -46654327 - AluY SINE Alu -12 299 1 186 340 10 41 chr5 152976190 152976287 -46653863 - L2 LINE L2 0 3313 3220 215 343 20 0 chr5 152976409 152976511 -46653639 + L2 LINE L2 2873 2976 -338 335 256 78 63 chr5 152976776 152976967 -46653183 - L2 LINE L2 -262 3051 2858 397 266 38 43 chr5 152977256 152977440 -46652710 + L1MC4a LINE L1 5749 5931 -1877 2432 92 0 0 chr5 152977635 152977941 -46652209 + AluSg SINE Alu 1 306 -4 1453 117 9 0 chr5 152978360 152978574 -46651576 - MER20 DNA MER1_type -3 216 1 189 0 0 0 chr5 152979696 152979717 -46650433 + (TTCA)n Simple_repeat Simple_repeat 2 22 0 1893 144 48 0 chr5 152979725 152980016 -46650134 - AluJo SINE Alu -7 305 1 283 213 96 59 chr5 152981499 152981635 -46648515 + L1ME4a LINE L1 5970 6110 -11 21 0 0 0 chr5 152982056 152982077 -46648073 + AT_rich Low_complexity Low_complexity 1 21 0 235 336 95 17 chr5 152982250 152982366 -46647784 - L2 LINE L2 -25 3247 3123 844 281 53 42 chr5 152982690 152983124 -46647026 - L1MC/D LINE L1 -1996 5812 5374 319 246 108 24 chr5 152983133 152983300 -46646850 + HAL1b LINE L1 1111 1291 -57 1559 187 33 40 chr5 152983349 152983649 -46646501 - AluJo SINE Alu -14 298 1 256 111 0 0 chr5 152983666 152983702 -46646448 - FLAM SINE Alu -12 121 86 1255 200 0 0 chr5 152983702 152983922 -46646228 - AluJo SINE Alu -92 220 1 183 228 177 25 chr5 152984214 152984293 -46645857 - L2 LINE L2 -35 3237 3147 599 253 163 0 chr5 152984399 152984565 -46645585 - MIR SINE MIR 0 262 70 242 229 205 84 chr5 152985748 152985914 -46644236 - MER5A DNA MER1_type 0 189 4 279 290 0 14 chr5 152987070 152987139 -46643011 - L2 LINE L2 0 3313 3246 296 223 10 78 chr5 152988671 152988774 -46641376 + MER112 DNA MER1_type 14 109 -151 270 122 24 0 chr5 152988852 152988893 -46641257 + MER112 DNA MER1_type 218 259 -1 2256 91 0 3 chr5 152991103 152991410 -46638740 - AluSc SINE Alu -3 306 1 650 150 71 0 chr5 152991449 152991562 -46638588 + AluSg/x SINE Alu 190 310 0 399 41 0 0 chr5 152991566 152991615 -46638535 + (CAGGG)n Simple_repeat Simple_repeat 2 50 0 434 140 0 53 chr5 152991647 152991761 -46638389 + (GAAA)n Simple_repeat Simple_repeat 4 111 0 1882 113 19 0 chr5 152991795 152992061 -46638089 - AluSx SINE Alu -41 271 1 910 254 96 78 chr5 152992082 152992676 -46637474 - LTR41 LTR ERVL 0 773 1 989 261 29 8 chr5 152992930 152993168 -46636982 + MIR SINE MIR 20 262 0 405 311 89 68 chr5 152993289 152993614 -46636536 + L3 LINE CR1 945 1276 -301 271 241 205 18 chr5 152993796 152993908 -46636242 - L2 LINE L2 -1 3312 3180 263 246 14 0 chr5 152993927 152993996 -46636154 + MER113 DNA MER1_type? 6 75 -446 337 224 122 112 chr5 152994351 152994547 -46635603 - L2 LINE L2 -250 3022 2825 1967 125 7 13 chr5 152995532 152995836 -46634314 + AluSx SINE Alu 8 309 -3 655 223 40 7 chr5 152996033 152996181 -46633969 - MIR SINE MIR -10 252 100 466 282 99 14 chr5 152996355 152996497 -46633653 + L2 LINE L2 3119 3272 0 287 356 199 16 chr5 152997111 152997302 -46632848 + MIR SINE MIR 31 256 -6 504 151 49 26 chr5 152998011 152998120 -46632030 + MLT1I LTR MaLR 305 402 -7 21 0 0 0 chr5 152998541 152998562 -46631588 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 152998694 152998717 -46631433 + AT_rich Low_complexity Low_complexity 1 23 0 267 235 212 0 chr5 152998755 152998840 -46631310 - MIR SINE MIR -1 261 159 2608 146 27 115 chr5 152998840 152999388 -46630762 - MLT2B2 LTR ERVL 0 515 16 390 229 31 10 chr5 152999395 152999491 -46630659 - MIR SINE MIR -99 163 66 327 323 87 0 chr5 153000292 153000419 -46629731 + L2 LINE L2 2917 3054 -218 1737 188 10 0 chr5 153000472 153000653 -46629497 - AluJo SINE Alu -6 306 119 197 32 0 32 chr5 153000653 153000684 -46629466 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1737 188 10 0 chr5 153000684 153000805 -46629345 - AluJo SINE Alu -193 119 1 1057 252 126 7 chr5 153001197 153001499 -46628651 - LTR16C LTR ERVL 0 491 154 290 222 89 103 chr5 153001739 153001861 -46628289 - MER113 DNA MER1_type? -321 200 81 1897 141 0 26 chr5 153001861 153002173 -46627977 + AluSx SINE Alu 1 304 -8 290 222 89 103 chr5 153002173 153002253 -46627897 - MER113 DNA MER1_type? -440 81 1 194 333 0 50 chr5 153002296 153002356 -46627794 - L2 LINE L2 -11 3302 3246 587 273 127 18 chr5 153003381 153003601 -46626549 + MIR SINE MIR 15 258 -4 2650 179 10 79 chr5 153003766 153004359 -46625791 - MLT2B3 LTR ERVL -2 552 1 617 285 151 58 chr5 153004677 153004822 -46625328 + L2 LINE L2 2567 2697 -616 5398 78 3 0 chr5 153004822 153005526 -46624624 + L1PB1 LINE L1 5446 6151 0 617 285 151 58 chr5 153005526 153005543 -46624607 + L2 LINE L2 2697 2711 -602 1861 146 7 0 chr5 153005543 153005844 -46624306 + AluJb SINE Alu 5 307 -5 617 285 151 58 chr5 153005844 153006330 -46623820 + L2 LINE L2 2711 3281 -32 186 43 0 0 chr5 153006339 153006362 -46623788 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 197 290 65 32 chr5 153007071 153007164 -46622986 - MIR SINE MIR -9 253 158 250 26 51 0 chr5 153007166 153007205 -46622945 + (TCTA)n Simple_repeat Simple_repeat 3 43 0 1078 246 195 3 chr5 153008588 153008942 -46621208 + LTR16B LTR ERVL 43 464 0 599 330 36 14 chr5 153008942 153009221 -46620929 + ERVL LTR ERVL 11 295 -4701 2164 110 0 0 chr5 153009253 153009562 -46620588 - AluSc SINE Alu 0 309 1 584 307 98 11 chr5 153010016 153010280 -46619870 + ERVL LTR ERVL 771 1057 -3939 1709 198 47 97 chr5 153010284 153010854 -46619296 + MLT1F LTR MaLR 1 542 0 3028 324 50 22 chr5 153010854 153011420 -46618730 + ERVL LTR ERVL 1058 1607 -3389 2088 116 0 3 chr5 153011420 153011721 -46618429 + AluSx SINE Alu 1 300 -12 3028 324 50 22 chr5 153011721 153012883 -46617267 + ERVL LTR ERVL 1607 2929 -2067 715 310 27 15 chr5 153012915 153013176 -46616974 + ERVL LTR ERVL 3243 3506 -2148 * 758 295 124 23 chr5 153013151 153013239 -46616911 + HERV16 LTR ERVL 3237 3315 -1681 536 88 62 0 chr5 153013239 153013319 -46616831 - L1PA11 LINE L1 -1 6173 6089 758 295 124 23 chr5 153013319 153013705 -46616445 + HERV16 LTR ERVL 3315 3759 -1237 520 294 0 39 chr5 153013722 153013902 -46616248 + HERV16 LTR ERVL 4133 4305 -1459 414 280 80 38 chr5 153013887 153014118 -46616032 - ERVL LTR ERVL -1921 3564 3358 * 2211 127 23 48 chr5 153014118 153014512 -46615638 + MLT1B LTR MaLR 7 390 0 801 342 33 19 chr5 153014512 153014880 -46615270 + HERV16 LTR ERVL 4288 4660 -1104 990 311 43 17 chr5 153014906 153015458 -46614692 + HERV16 LTR ERVL 4717 5284 -201 1079 288 26 58 chr5 153015632 153016084 -46614066 + LTR16B LTR ERVL 1 438 -26 531 243 5 119 chr5 153016277 153016379 -46613771 + L2 LINE L2 2070 2139 -1175 2189 116 3 0 chr5 153016379 153016690 -46613460 - AluSx SINE Alu 0 312 1 531 243 5 119 chr5 153016690 153016789 -46613361 + L2 LINE L2 2139 2248 -1066 5080 151 28 13 chr5 153016792 153017813 -46612337 + L1MB7 LINE L1 5147 6184 0 1821 254 65 62 chr5 153017852 153018279 -46611871 + L2 LINE L2 2249 2673 -640 1926 163 28 53 chr5 153018279 153018678 -46611472 + MLT1B LTR MaLR 1 389 -1 1821 254 65 62 chr5 153018678 153019314 -46610836 + L2 LINE L2 2673 3311 -2 1955 138 0 0 chr5 153019396 153019714 -46610436 + AluSx SINE Alu 1 318 0 1747 144 0 18 chr5 153019858 153020136 -46610014 - AluJb SINE Alu -26 286 14 24 0 0 0 chr5 153020175 153020199 -46609951 + AT_rich Low_complexity Low_complexity 1 24 0 962 204 0 0 chr5 153020383 153020559 -46609591 + FRAM SINE Alu 1 176 0 2055 119 7 0 chr5 153021035 153021329 -46608821 + AluSx SINE Alu 1 296 -16 389 235 20 115 chr5 153021715 153021795 -46608355 - MER5A DNA MER1_type 0 189 103 2052 92 7 7 chr5 153021795 153022076 -46608074 + AluSq SINE Alu 1 281 -32 389 235 20 115 chr5 153022076 153022195 -46607955 - MER5A DNA MER1_type -86 103 9 281 305 125 8 chr5 153022187 153022315 -46607835 + MER5A DNA MER1_type 47 189 0 * 407 323 86 11 chr5 153023162 153023348 -46606802 - MIR SINE MIR 0 262 63 677 264 85 14 chr5 153024053 153024265 -46605885 + MIR SINE MIR 5 231 -31 631 254 66 52 chr5 153024432 153024704 -46605446 + MER102a DNA MER1_type 53 328 -2 845 192 0 47 chr5 153025789 153025982 -46604168 - MER5A DNA MER1_type -1 188 5 736 254 17 6 chr5 153026814 153026991 -46603159 - MER5A DNA MER1_type 0 189 11 1028 171 28 23 chr5 153027080 153027296 -46602854 - MER20 DNA MER1_type 0 219 3 378 199 145 38 chr5 153027479 153027610 -46602540 - MER33 DNA MER1_type -145 179 35 784 290 33 8 chr5 153028294 153028539 -46601611 - MIR SINE MIR -10 252 2 189 171 0 0 chr5 153028592 153028627 -46601523 + (TATATG)n Simple_repeat Simple_repeat 6 40 0 231 194 0 82 chr5 153028627 153028725 -46601425 - L1MC4 LINE L1 -1339 6703 6614 253 157 0 0 chr5 153028729 153028780 -46601370 + LTR66 LTR ERVL 394 444 -166 2842 138 33 12 chr5 153029623 153030108 -46600042 + L1MB3 LINE L1 5689 6183 0 906 186 0 11 chr5 153031208 153031385 -46598765 - FRAM SINE Alu -1 175 1 1003 51 0 0 chr5 153031623 153031740 -46598410 + THE1C LTR MaLR 1 117 -258 3293 76 46 195 chr5 153031742 153032456 -46597694 - LTR66 LTR ERVL -2 608 1 1422 111 128 4 chr5 153032456 153032690 -46597460 + THE1C LTR MaLR 113 375 0 1449 215 3 7 chr5 153032834 153033141 -46597009 + AluJo SINE Alu 1 306 -6 456 223 80 74 chr5 153033301 153033476 -46596674 + Charlie8 DNA MER1_type 24 199 -2218 4092 137 25 2 chr5 153033558 153034192 -46595958 - Tigger1 DNA MER2_type 0 2418 1770 1124 124 24 0 chr5 153034192 153034361 -46595789 - MLT2A2 LTR ERVL 0 453 281 566 68 0 0 chr5 153034369 153034442 -46595708 - MLT2A2 LTR ERVL -380 73 1 * 11809 125 11 13 chr5 153034442 153035043 -46595107 - Tigger1 DNA MER2_type -644 1774 1173 1813 150 3 7 chr5 153035043 153035337 -46594813 - AluJb SINE Alu -19 293 1 11809 125 11 13 chr5 153035337 153036513 -46593637 - Tigger1 DNA MER2_type -1245 1173 1 1803 99 6 108 chr5 153036762 153037095 -46593055 + AluSq SINE Alu 1 299 -14 688 170 69 101 chr5 153037235 153037423 -46592727 + AluJo SINE Alu 124 305 -7 386 115 16 41 chr5 153037559 153037613 -46592537 + Tigger2 DNA MER2_type 1 29 -405 2209 87 7 10 chr5 153037613 153037913 -46592237 - AluSq SINE Alu -14 299 1 386 115 16 41 chr5 153037913 153037940 -46592210 + Tigger2 DNA MER2_type 29 55 -379 2250 93 13 0 chr5 153037949 153038261 -46591889 - Tigger1 DNA MER2_type -1376 1042 727 828 254 0 22 chr5 153038276 153038457 -46591693 - MER8 DNA MER2_type -62 177 1 923 263 143 34 chr5 153038515 153040188 -46589962 + L1M4c LINE L1 782 2760 -3622 734 281 154 34 chr5 153040277 153040601 -46589549 + MLT1I LTR MaLR 19 381 -28 2294 81 0 16 chr5 153041043 153041353 -46588797 + AluY SINE Alu 1 305 -6 412 252 115 11 chr5 153041470 153041677 -46588473 - L1MC4a LINE L1 -302 5819 5653 335 233 0 0 chr5 153041812 153041872 -46588278 + L2 LINE L2 3254 3313 0 1177 175 33 0 chr5 153041938 153042149 -46588001 - MER20 DNA MER1_type -1 218 1 1145 101 24 18 chr5 153042211 153042380 -46587770 + AluSq SINE Alu 1 170 -143 222 239 0 0 chr5 153042397 153042443 -46587707 - L2 LINE L2 0 3313 3268 981 107 0 7 chr5 153042443 153042592 -46587558 + AluSg/x SINE Alu 156 303 -9 4064 69 107 0 chr5 153042862 153043413 -46586737 + LTR66 LTR ERVL 1 610 0 396 256 0 12 chr5 153043546 153043632 -46586518 + L2 LINE L2 3229 3313 0 310 192 67 88 chr5 153043704 153043856 -46586294 - Charlie2 DNA MER1_type -19 2843 2694 2089 115 10 0 chr5 153043856 153044152 -46585998 + AluSx SINE Alu 1 299 -13 310 192 67 88 chr5 153044152 153044192 -46585958 - Charlie2 DNA MER1_type -168 2694 2655 641 239 161 39 chr5 153044283 153044588 -46585562 - Charlie2 DNA MER1_type -2427 355 14 296 323 151 26 chr5 153044979 153045211 -46584939 + MIR SINE MIR 1 261 -1 922 308 54 22 chr5 153047086 153047587 -46582563 - MLT1K LTR MaLR 0 588 2 2202 107 0 22 chr5 153048280 153048598 -46581552 - AluSx SINE Alu -1 311 1 606 289 13 0 chr5 153048670 153048826 -46581324 - MIR SINE MIR -58 204 47 214 286 7 101 chr5 153049518 153049690 -46580460 - MIR SINE MIR -61 147 35 533 52 13 0 chr5 153049752 153049829 -46580321 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 2694 167 60 2 chr5 153049861 153050377 -46579773 + L1MB8 LINE L1 5633 6178 0 1743 71 0 4 chr5 153050380 153050606 -46579544 + AluSg/x SINE Alu 82 306 -6 324 0 0 0 chr5 153051031 153051067 -46579083 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 489 62 0 0 chr5 153051165 153051230 -46578920 + (TG)n Simple_repeat Simple_repeat 2 66 0 1815 152 0 20 chr5 153051546 153051842 -46578308 - AluJb SINE Alu -22 290 1 956 250 129 77 chr5 153052043 153052104 -46578046 - L2 LINE L2 0 3313 3257 1092 181 0 31 chr5 153052104 153052297 -46577853 + MER5A DNA MER1_type 3 189 0 956 250 129 77 chr5 153052297 153052400 -46577750 - L2 LINE L2 -56 3257 3161 2138 88 0 3 chr5 153052400 153052752 -46577398 - AluSx SINE Alu 0 351 1 956 250 129 77 chr5 153052752 153053271 -46576879 - L2 LINE L2 -152 3161 2584 2417 37 0 55 chr5 153053526 153053851 -46576299 - AluY SINE Alu -4 307 1 23 0 0 0 chr5 153053855 153053878 -46576272 + AT_rich Low_complexity Low_complexity 1 23 0 2353 52 3 13 chr5 153053890 153054196 -46575954 + AluY SINE Alu 1 303 -8 225 65 0 0 chr5 153055775 153055806 -46574344 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr5 153056755 153056776 -46573374 + (CA)n Simple_repeat Simple_repeat 1 21 0 246 218 0 0 chr5 153057191 153057246 -46572904 + (CA)n Simple_repeat Simple_repeat 1 55 0 323 23 23 0 chr5 153057985 153058029 -46572121 + (TG)n Simple_repeat Simple_repeat 2 46 0 3323 129 35 29 chr5 153059756 153060041 -46570109 - MER41C LTR ERV1 0 554 263 2199 95 20 0 chr5 153060041 153060346 -46569804 - AluSp SINE Alu -2 311 1 3323 129 35 29 chr5 153060346 153060611 -46569539 - MER41C LTR ERV1 -291 263 1 562 231 218 14 chr5 153061251 153061467 -46568683 + MIR SINE MIR 3 262 0 2086 123 7 0 chr5 153061507 153061817 -46568333 + AluSq SINE Alu 1 312 -1 707 263 99 22 chr5 153061975 153062207 -46567943 - MIR SINE MIR -8 254 5 525 300 28 11 chr5 153062876 153063056 -46567094 - MER5A DNA MER1_type 0 189 7 484 199 166 100 chr5 153063202 153063443 -46566707 - MIR SINE MIR 0 262 6 1695 136 81 106 chr5 153063650 153064046 -46566104 + MLT1B LTR MaLR 1 386 -4 255 245 20 41 chr5 153064172 153064270 -46565880 + GA-rich Low_complexity Low_complexity 4 99 0 621 307 111 32 chr5 153064301 153064784 -46565366 - L2 LINE L2 -1 3271 2742 893 294 109 22 chr5 153065765 153066177 -46563973 + L2 LINE L2 2864 3311 -2 231 114 0 0 chr5 153066947 153066991 -46563159 + (TTTTTG)n Simple_repeat Simple_repeat 3 46 0 720 267 82 0 chr5 153067290 153067496 -46562654 + MIR SINE MIR 7 229 -33 307 264 0 107 chr5 153067512 153067633 -46562517 + MIR SINE MIR 155 262 0 224 316 136 48 chr5 153068108 153068314 -46561836 + MIR SINE MIR 1 224 -38 401 292 88 80 chr5 153069639 153070249 -46559901 - L2 LINE L2 -128 3185 2569 349 246 152 64 chr5 153070834 153071052 -46559098 - MIR SINE MIR 0 262 17 2215 102 0 0 chr5 153071086 153071390 -46558760 + AluSx SINE Alu 1 304 -8 194 189 0 94 chr5 153071495 153071548 -46558602 + L2 LINE L2 3261 3308 -5 361 216 110 155 chr5 153071582 153071827 -46558323 - L1ME4a LINE L1 -2 6119 5886 516 304 141 14 chr5 153071918 153072138 -46558012 + MIR SINE MIR 14 261 -1 332 346 102 32 chr5 153073253 153073850 -46556300 - L2 LINE L2 -18 3254 2622 250 274 189 9 chr5 153074451 153074557 -46555593 - L2 LINE L2 -8 3264 3140 214 268 16 98 chr5 153074669 153074792 -46555358 + L2 LINE L2 2726 2838 -476 337 264 72 78 chr5 153075124 153075291 -46554859 - MIR SINE MIR 0 262 97 2515 49 0 0 chr5 153076278 153076586 -46553564 - AluY SINE Alu -3 308 1 2122 106 0 13 chr5 153076588 153076891 -46553259 - AluSg SINE Alu -11 299 1 224 128 0 21 chr5 153076894 153076941 -46553209 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 1246 176 108 36 chr5 153076943 153077221 -46552929 - AluJo SINE Alu 0 312 15 369 0 0 0 chr5 153077570 153077611 -46552539 + (TG)n Simple_repeat Simple_repeat 2 42 0 693 162 9 0 chr5 153078700 153078811 -46551339 - FLAM_A SINE Alu -9 133 22 771 241 73 22 chr5 153078907 153079139 -46551011 - MIR SINE MIR -7 255 12 327 250 25 0 chr5 153079255 153079335 -46550815 - HsTC2 DNA Tc2 0 1898 1817 288 186 0 17 chr5 153079339 153079398 -46550752 - HsTC2 DNA Tc2 -1838 60 3 183 80 0 0 chr5 153080620 153080645 -46549505 + (T)n Simple_repeat Simple_repeat 1 25 0 1545 176 14 10 chr5 153080768 153081058 -46549092 + AluJo SINE Alu 2 292 -20 226 211 289 11 chr5 153081159 153081249 -46548901 + L2 LINE L2 3158 3272 0 583 263 7 15 chr5 153081309 153081446 -46548704 - L2 LINE L2 0 3313 3178 3690 151 88 41 chr5 153081604 153081869 -46548281 - L1MB7 LINE L1 -9 6175 5924 2178 75 31 0 chr5 153081869 153082163 -46547987 - AluY SINE Alu -8 303 1 3690 151 88 41 chr5 153082163 153082657 -46547493 - L1MB7 LINE L1 -260 5924 5380 320 217 33 0 chr5 153082700 153082760 -46547390 + L2 LINE L2 3208 3269 -3 300 229 110 25 chr5 153084126 153084244 -46545906 - MIR SINE MIR -29 233 106 2235 80 21 0 chr5 153084370 153084659 -46545491 + AluSc SINE Alu 1 295 -14 26 64 0 0 chr5 153084693 153084740 -46545410 + AT_rich Low_complexity Low_complexity 1 47 0 182 250 288 0 chr5 153084960 153085040 -46545110 - L2 LINE L2 -17 3255 3153 289 286 76 145 chr5 153085099 153085403 -46544747 + L2 LINE L2 2989 3271 -1 220 325 152 21 chr5 153085414 153085802 -46544348 - L2 LINE L2 -496 2818 2380 194 333 0 0 chr5 153087299 153087377 -46542773 + MIR SINE MIR 164 241 -21 262 261 80 67 chr5 153087478 153087615 -46542535 - MIR3 SINE MIR -49 159 22 2276 105 3 3 chr5 153087758 153088062 -46542088 + AluSx SINE Alu 1 304 -8 438 121 205 0 chr5 153088062 153088145 -46542005 - AluJo/FLAM SINE Alu -194 118 19 27 29 0 0 chr5 153089592 153089626 -46540524 + AT_rich Low_complexity Low_complexity 1 34 0 2270 100 0 10 chr5 153091756 153092055 -46538095 + AluSq SINE Alu 1 296 -17 660 153 83 0 chr5 153092094 153092238 -46537912 + L1MD2 LINE L1 6202 6357 -2 824 210 127 4 chr5 153092681 153092910 -46537240 + MIR SINE MIR 3 259 -3 239 276 117 35 chr5 153092922 153093067 -46537083 + L1ME4a LINE L1 5939 6095 -26 2420 73 0 0 chr5 153093090 153093377 -46536773 + AluY SINE Alu 2 288 -23 2302 101 0 3 chr5 153093392 153093698 -46536452 + AluSc SINE Alu 3 307 -2 393 116 29 14 chr5 153093709 153093778 -46536372 + L1MC4 LINE L1 7971 8040 -2 222 163 0 0 chr5 153095314 153095349 -46534801 + A-rich Low_complexity Low_complexity 1 38 -5 2218 129 0 3 chr5 153095349 153095660 -46534490 + AluSx SINE Alu 1 310 -2 23 0 0 0 chr5 153095994 153096017 -46534133 + AT_rich Low_complexity Low_complexity 1 23 0 417 229 166 81 chr5 153096025 153096248 -46533902 - MIR SINE MIR -8 254 13 541 234 38 34 chr5 153097728 153097937 -46532213 - AluSq SINE Alu -101 212 3 879 168 14 146 chr5 153097937 153098026 -46532124 - AluJo SINE Alu -121 191 147 2495 48 3 19 chr5 153098026 153098335 -46531815 - AluY SINE Alu -7 304 1 879 168 14 146 chr5 153098335 153098465 -46531685 - AluJo SINE Alu -165 147 1 1979 145 0 10 chr5 153098479 153098645 -46531505 - AluJb SINE Alu -12 300 137 2291 81 13 3 chr5 153098645 153098943 -46531207 - AluY SINE Alu -10 301 1 1979 145 0 10 chr5 153098943 153099079 -46531071 - AluJb SINE Alu -175 137 1 559 293 47 14 chr5 153099119 153099334 -46530816 + L1MEc LINE L1 1517 1738 -4658 2213 116 3 3 chr5 153099575 153099885 -46530265 - AluSx SINE Alu -2 310 1 2329 98 0 19 chr5 153099926 153100241 -46529909 - AluSq SINE Alu -4 309 1 545 202 17 98 chr5 153100702 153100875 -46529275 - LTR33 LTR ERVL -52 469 311 377 318 10 110 chr5 153100882 153101325 -46528825 + L2 LINE L2 2659 3055 -217 1609 140 0 0 chr5 153101416 153101645 -46528505 - AluJo SINE Alu -14 298 70 21 0 0 0 chr5 153101954 153101975 -46528175 + AT_rich Low_complexity Low_complexity 1 21 0 827 165 0 0 chr5 153101975 153102102 -46528048 - FLAM_C SINE Alu -6 127 1 240 156 0 0 chr5 153102673 153102694 -46527456 + (TAA)n Simple_repeat Simple_repeat 3 23 -24 2137 66 52 25 chr5 153102694 153102980 -46527170 + AluY SINE Alu 1 294 -17 240 156 0 0 chr5 153102980 153103003 -46527147 + (TAA)n Simple_repeat Simple_repeat 22 47 0 212 245 19 0 chr5 153103007 153103060 -46527090 - L2 LINE L2 -11 3261 3208 557 300 156 35 chr5 153103080 153103618 -46526532 + L2 LINE L2 2697 3313 0 451 274 11 74 chr5 153103627 153103802 -46526348 - MIR SINE MIR -90 172 9 820 53 0 0 chr5 153103839 153103933 -46526217 - AluS SINE Alu -217 96 3 420 296 37 7 chr5 153103946 153104081 -46526069 + L2 LINE L2 3175 3313 0 279 270 63 9 chr5 153104319 153104430 -46525720 - MIR SINE MIR -86 176 60 1951 162 0 3 chr5 153105155 153105451 -46524699 - AluJb SINE Alu -17 295 1 1199 162 43 39 chr5 153105669 153105903 -46524247 - AluJb SINE Alu -64 248 14 598 267 51 6 chr5 153105910 153106086 -46524064 - MIR SINE MIR -39 223 40 269 371 10 10 chr5 153106653 153106750 -46523400 + L2 LINE L2 3147 3243 -29 2314 77 0 13 chr5 153106860 153107160 -46522990 - AluSg1 SINE Alu -13 296 1 192 220 40 0 chr5 153107677 153107727 -46522423 + L2 LINE L2 2699 2750 -564 349 272 46 105 chr5 153107754 153108144 -46522006 + L2 LINE L2 2849 3215 -57 381 43 0 0 chr5 153108171 153108218 -46521932 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 21 0 0 0 chr5 153112632 153112653 -46517497 + AT_rich Low_complexity Low_complexity 1 21 0 2236 87 24 0 chr5 153112653 153112941 -46517209 - AluSg SINE Alu -15 295 1 1026 143 29 2 chr5 153114774 153115675 -46514475 + ALR/Alpha Satellite centromeric 1 924 -3 12949 63 3 4 chr5 153115675 153117335 -46512815 - L1PA3 LINE L1 -1175 4971 3313 7017 59 5 0 chr5 153117335 153118489 -46511661 + L1PA3 LINE L1 4998 6155 0 1231 150 1 2 chr5 153118522 153121899 -46508251 + ALR/Alpha Satellite centromeric 1 3376 -64 30876 64 3 5 chr5 153121904 153125874 -46504276 + L1P LINE L1 442 4406 -1740 1292 20 0 0 chr5 153125870 153126022 -46504128 - L1P LINE L1 -3042 3104 2953 * 8634 60 5 0 chr5 153126022 153127876 -46502274 + L1PA3 LINE L1 4297 6154 -1 1245 162 5 3 chr5 153127880 153137595 -46492555 - ALR/Alpha Satellite centromeric -1 9726 1 1150 168 4 3 chr5 153137678 153144037 -46486113 - ALR/Alpha Satellite centromeric -2 6368 1 12983 73 2 0 chr5 153144037 153145742 -46484408 - L1P LINE L1 -3586 2560 852 1122 170 4 2 chr5 153145756 153153609 -46476541 - ALR/Alpha Satellite centromeric 0 7870 1 2626 52 7 0 chr5 153153738 153154047 -46476103 + AluY SINE Alu 1 311 0 249 33 0 0 chr5 153154375 153154405 -46475745 + (T)n Simple_repeat Simple_repeat 1 30 0 229 250 31 16 chr5 153154405 153154469 -46475681 - MLT1K LTR MaLR -4 584 520 743 152 122 30 chr5 153155038 153155202 -46474948 - MER97b DNA MER1_type? -874 179 1 245 317 164 0 chr5 153155793 153155827 -46474323 + MIR SINE MIR 2 29 -233 1529 176 4 11 chr5 153155827 153156089 -46474061 + AluJo SINE Alu 1 260 -52 245 317 164 0 chr5 153156089 153156158 -46473992 + MIR SINE MIR 29 122 -140 2376 102 0 0 chr5 153156158 153156461 -46473689 - AluSx SINE Alu -9 303 1 2766 180 21 31 chr5 153156470 153157052 -46473098 - L1MB7 LINE L1 -74 6110 5535 306 282 12 0 chr5 153157065 153157150 -46473000 + MIR SINE MIR 154 239 -23 1507 151 0 17 chr5 153157155 153157387 -46472763 - AluJb SINE Alu -84 228 1 1680 94 54 0 chr5 153157481 153157704 -46472446 - AluSg/x SINE Alu -13 299 65 298 191 60 24 chr5 153159154 153159238 -46470912 - MIR SINE MIR -66 196 110 756 299 115 17 chr5 153159248 153159799 -46470351 + L2 LINE L2 2691 3312 -1 277 234 36 72 chr5 153159800 153159911 -46470239 - MIR SINE MIR -111 151 45 2416 97 0 0 chr5 153160780 153161079 -46469071 - AluSg SINE Alu -11 299 1 2483 79 3 3 chr5 153161097 153161400 -46468750 - AluSp SINE Alu -10 303 1 1698 131 4 0 chr5 153161405 153161649 -46468501 - AluSx SINE Alu -13 299 55 2100 112 0 14 chr5 153162070 153162357 -46467793 - AluSx SINE Alu -29 283 1 2316 89 0 0 chr5 153162728 153163066 -46467084 - AluSx SINE Alu 0 338 1 507 298 39 43 chr5 153163291 153163573 -46466577 + L2 LINE L2 3019 3299 -14 343 258 11 22 chr5 153163848 153163937 -46466213 - L2 LINE L2 -39 3233 3146 261 241 51 0 chr5 153164148 153164227 -46465923 + MIR SINE MIR 102 184 -78 541 289 83 0 chr5 153164249 153164453 -46465697 - MIR SINE MIR 0 262 42 267 81 0 0 chr5 153165398 153165435 -46464715 + L3 LINE CR1 1426 1462 -115 2030 139 7 0 chr5 153165481 153165783 -46464367 - AluSx SINE Alu 0 304 1 375 160 106 43 chr5 153165856 153165935 -46464215 + Tigger7 DNA MER2_type 1 88 -645 2220 104 26 7 chr5 153165935 153166242 -46463908 + AluSq SINE Alu 1 313 0 375 160 106 43 chr5 153166242 153166256 -46463894 + Tigger7 DNA MER2_type 88 100 -633 1449 119 45 0 chr5 153166263 153166465 -46463685 + AluSg/x SINE Alu 82 292 -18 1438 112 17 30 chr5 153166465 153166698 -46463452 + Tigger7 DNA MER2_type 2258 2487 0 229 234 0 0 chr5 153166748 153166795 -46463355 + MIR SINE MIR 79 125 -83 593 239 14 0 chr5 153167067 153167209 -46462941 + MIR SINE MIR 16 159 -103 397 196 275 0 chr5 153167210 153167343 -46462807 + FLAM_C SINE Alu 2 143 -181 2482 81 0 7 chr5 153167343 153167651 -46462499 + AluSg SINE Alu 1 306 -4 397 196 275 0 chr5 153167651 153167669 -46462481 + FLAM_C SINE Alu 143 155 -169 351 204 118 0 chr5 153167669 153167762 -46462388 + MIR SINE MIR 148 251 -11 1751 158 11 7 chr5 153167882 153168154 -46461996 - AluJo SINE Alu -37 275 3 23 0 0 0 chr5 153168159 153168182 -46461968 + AT_rich Low_complexity Low_complexity 1 23 0 2078 101 14 3 chr5 153168182 153168469 -46461681 - AluSq SINE Alu -23 290 1 1881 156 3 26 chr5 153168471 153168773 -46461377 - AluJo SINE Alu -17 295 1 400 299 132 12 chr5 153168777 153168944 -46461206 - MIR SINE MIR -60 202 16 1964 152 0 13 chr5 153170907 153171223 -46458927 - AluJb SINE Alu 0 312 1 255 288 225 9 chr5 153171226 153171337 -46458813 + L2 LINE L2 3163 3297 -16 216 67 0 0 chr5 153171351 153171381 -46458769 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 872 128 0 23 chr5 153171418 153171551 -46458599 + FLAM_C SINE Alu 2 131 -2 1944 195 51 6 chr5 153171640 153172381 -46457769 + L1MD2 LINE L1 4903 5667 -692 1111 84 7 7 chr5 153172383 153172526 -46457624 + AluSq/x SINE Alu 1 143 -170 2249 108 10 7 chr5 153172526 153172833 -46457317 + AluSq SINE Alu 1 308 -5 1732 194 149 81 chr5 153172834 153172950 -46457200 + L1MD2 LINE L1 5668 5775 -584 2252 114 0 0 chr5 153172950 153173249 -46456901 + AluSx SINE Alu 5 303 -9 1732 194 149 81 chr5 153173249 153173717 -46456433 + L1MD2 LINE L1 5775 6300 -59 2089 141 0 0 chr5 153173717 153174014 -46456136 - AluSx SINE Alu -15 297 1 1732 194 149 81 chr5 153174014 153174058 -46456092 + L1MD2 LINE L1 6300 6340 -19 1228 211 23 67 chr5 153174298 153174640 -46455510 - HERV16 LTR ERVL -2889 2107 1781 961 70 0 0 chr5 153174649 153174764 -46455386 - AluSq/x SINE Alu -198 115 1 921 264 97 30 chr5 153174796 153175095 -46455055 - HERV16 LTR ERVL -3655 1341 1023 936 272 78 27 chr5 153175128 153175806 -46454344 - HERV16 LTR ERVL -4044 952 186 601 323 61 14 chr5 153175942 153176221 -46453929 - LTR16A LTR ERVL 0 450 159 2405 104 0 0 chr5 153177384 153177692 -46452458 - AluSx SINE Alu -4 308 1 325 235 147 0 chr5 153177749 153177851 -46452299 + MLT2F LTR ERVL 1 117 -546 1212 196 143 10 chr5 153177878 153178179 -46451971 + MLT2F LTR ERVL 254 594 -69 495 95 0 0 chr5 153178181 153178255 -46451895 + (TC)n Simple_repeat Simple_repeat 1 74 0 234 143 0 0 chr5 153178271 153178306 -46451844 + MLT2F LTR ERVL 616 650 -13 285 80 9 17 chr5 153179026 153179252 -46450898 + AluSx SINE Alu 1 301 -1 1802 201 109 17 chr5 153179386 153180312 -46449838 - L1MC4 LINE L1 -383 7659 6467 497 262 158 6 chr5 153180888 153181052 -46449098 - L2 LINE L2 -627 2687 2499 2443 80 0 3 chr5 153181151 153181452 -46448698 + AluSx SINE Alu 1 300 -12 833 165 119 23 chr5 153182121 153182315 -46447835 - L1MA4A LINE L1 -1 6302 6128 2022 94 4 0 chr5 153182315 153182570 -46447580 + AluSx SINE Alu 48 303 -9 833 165 119 23 chr5 153182570 153182581 -46447569 - L1MA4A LINE L1 -175 6128 6119 804 172 0 8 chr5 153182581 153182715 -46447435 + FLAM_C SINE Alu 1 133 0 833 165 119 23 chr5 153182715 153182768 -46447382 - L1MA4A LINE L1 -184 6119 6018 686 102 0 37 chr5 153183621 153183729 -46446421 - AluSq/x SINE Alu -179 133 30 2528 87 0 0 chr5 153184433 153184743 -46445407 + AluSx SINE Alu 1 310 -2 2223 109 3 22 chr5 153184745 153185056 -46445094 + AluSp SINE Alu 2 306 -7 2360 91 0 13 chr5 153185124 153185431 -46444719 - AluSx SINE Alu -9 303 1 29 60 0 0 chr5 153185664 153185714 -46444436 + AT_rich Low_complexity Low_complexity 1 50 0 1517 175 66 7 chr5 153185807 153186093 -46444057 + AluJo SINE Alu 1 303 -9 2087 141 0 0 chr5 153186125 153186422 -46443728 - AluSx SINE Alu -15 297 1 1830 169 10 7 chr5 153186855 153187151 -46442999 - AluJb SINE Alu -14 298 2 283 348 13 6 chr5 153187237 153187395 -46442755 + MIR SINE MIR 24 182 -80 761 199 0 0 chr5 153187477 153187613 -46442537 + FLAM_C SINE Alu 2 137 -6 334 250 113 75 chr5 153187973 153188133 -46442017 - MARNA DNA Mariner -179 407 242 396 279 132 61 chr5 153189284 153189754 -46440396 + MLT1K LTR MaLR 4 518 -70 2246 109 0 6 chr5 153189754 153190065 -46440085 - AluSg SINE Alu -1 309 1 396 279 132 61 chr5 153190065 153190132 -46440018 + MLT1K LTR MaLR 518 579 -9 1016 171 105 0 chr5 153190747 153190781 -46439369 + AluJo SINE Alu 90 119 -193 360 0 0 0 chr5 153190781 153190821 -46439329 + (TG)n Simple_repeat Simple_repeat 1 40 0 1016 171 105 0 chr5 153190821 153190967 -46439183 + AluJo SINE Alu 119 289 -23 311 316 145 7 chr5 153190980 153191132 -46439018 + L1MC4a LINE L1 5377 5549 -629 527 216 61 20 chr5 153191187 153191422 -46438728 + MLT1H LTR MaLR 75 389 -206 368 183 49 11 chr5 153191473 153191565 -46438585 + MLT1F LTR MaLR 452 549 0 442 282 82 60 chr5 153191565 153191750 -46438400 + L1MC4a LINE L1 5694 5891 -230 2196 83 24 3 chr5 153191750 153192040 -46438110 - AluSc SINE Alu -13 296 1 442 282 82 60 chr5 153192040 153192170 -46437980 + L1MC4a LINE L1 5891 6017 -104 286 167 0 0 chr5 153192237 153192285 -46437865 + CT-rich Low_complexity Low_complexity 1 48 0 682 109 7 29 chr5 153192286 153192313 -46437837 + (TTCC)n Simple_repeat Simple_repeat 2 28 -107 2319 84 7 0 chr5 153192313 153192599 -46437551 - AluSg SINE Alu -22 288 1 682 109 7 29 chr5 153192599 153192708 -46437442 + (TTCC)n Simple_repeat Simple_repeat 28 135 0 241 318 104 26 chr5 153192896 153193050 -46437100 - MIR SINE MIR -77 185 20 240 297 40 0 chr5 153193152 153193226 -46436924 + MIR SINE MIR 47 123 -139 202 311 63 53 chr5 153193227 153193417 -46436733 - L2 LINE L2 -7 3306 3115 856 191 20 0 chr5 153193419 153193571 -46436579 + AluJb SINE Alu 137 291 -21 320 154 31 0 chr5 153193571 153193636 -46436514 + GA-rich Low_complexity Low_complexity 1 67 0 263 380 8 0 chr5 153193652 153193773 -46436377 + MIR SINE MIR 116 237 -25 1293 128 0 0 chr5 153196225 153196404 -46433746 + AluSg/x SINE Alu 124 302 -8 2352 100 3 0 chr5 153196412 153196723 -46433427 + AluSq SINE Alu 2 313 0 246 254 14 14 chr5 153196789 153196860 -46433290 + GA-rich Low_complexity Low_complexity 4 74 0 546 284 69 14 chr5 153196916 153197134 -46433016 + MIR SINE MIR 31 260 -2 222 281 18 0 chr5 153197701 153197758 -46432392 + L2 LINE L2 3249 3306 -7 629 270 34 0 chr5 153198309 153198487 -46431663 - MIR SINE MIR -3 259 76 211 329 126 52 chr5 153198596 153198674 -46431476 + L2 LINE L2 2923 2994 -278 1634 130 52 115 chr5 153198674 153198725 -46431425 - THE1C LTR MaLR 0 375 322 2310 107 0 0 chr5 153198725 153199024 -46431126 - AluSx SINE Alu -13 299 1 1634 130 52 115 chr5 153199024 153199372 -46430778 - THE1C LTR MaLR -53 322 1 211 329 126 52 chr5 153199372 153199618 -46430532 + L2 LINE L2 2994 3271 -1 2126 123 3 10 chr5 153200412 153200712 -46429438 - AluJo SINE Alu -14 298 1 22 56 0 0 chr5 153201821 153201857 -46428293 + AT_rich Low_complexity Low_complexity 1 36 0 2254 105 0 0 chr5 153201865 153202160 -46427990 + AluSg SINE Alu 1 295 -15 2183 117 3 7 chr5 153202422 153202721 -46427429 - AluSx SINE Alu -14 298 1 336 283 42 8 chr5 153202953 153203073 -46427077 + MIR SINE MIR 79 202 -60 1613 169 0 0 chr5 153203732 153203974 -46426176 + AluJb SINE Alu 37 278 -34 232 270 29 80 chr5 153203981 153204118 -46426032 + L1MC4 LINE L1 7217 7346 -696 2278 97 0 13 chr5 153204235 153204535 -46425615 - AluSg SINE Alu -14 296 1 27 0 0 0 chr5 153204546 153204573 -46425577 + AT_rich Low_complexity Low_complexity 1 27 0 2080 125 0 10 chr5 153206420 153206717 -46423433 - AluSx SINE Alu -18 294 1 1950 155 0 31 chr5 153206763 153207085 -46423065 - AluJo SINE Alu 0 312 1 2542 98 28 94 chr5 153207146 153207555 -46422595 + MSTA LTR MaLR 1 378 -50 2413 92 3 0 chr5 153207555 153207859 -46422291 - AluSc SINE Alu -4 305 1 2542 98 28 94 chr5 153207859 153207907 -46422243 + MSTA LTR MaLR 378 428 0 1345 215 165 52 chr5 153207931 153208033 -46422117 + MER39 LTR ERV1 5 94 -613 2370 88 3 3 chr5 153208033 153208340 -46421810 - AluY SINE Alu -4 307 1 1345 215 165 52 chr5 153208340 153208523 -46421627 + MER39 LTR ERV1 94 255 -452 1571 167 52 0 chr5 153208523 153208826 -46421324 + AluSx SINE Alu 1 317 0 1345 215 165 52 chr5 153208826 153208854 -46421296 + MER39 LTR ERV1 255 278 -429 2325 80 27 0 chr5 153208854 153209154 -46420996 - AluSp SINE Alu -4 309 2 1345 215 165 52 chr5 153209154 153209304 -46420846 + MER39 LTR ERV1 278 705 -2 357 311 50 12 chr5 153209666 153209827 -46420323 + MIR SINE MIR 2 168 -94 1485 173 91 40 chr5 153210617 153210969 -46419181 + MLT1A2 LTR MaLR 1 370 -4 477 211 102 14 chr5 153211042 153211189 -46418961 + L1ME4a LINE L1 5947 6106 -15 2455 88 3 0 chr5 153211826 153212132 -46418018 - AluSp SINE Alu -6 307 1 200 35 35 0 chr5 153212356 153212385 -46417765 + (CAGCC)n Simple_repeat Simple_repeat 3 32 0 201 147 0 0 chr5 153212394 153212428 -46417722 + (T)n Simple_repeat Simple_repeat 1 34 0 1180 120 6 22 chr5 153213505 153213688 -46416462 - AluSg/x SINE Alu -11 301 122 21 0 0 0 chr5 153213789 153213810 -46416340 + AT_rich Low_complexity Low_complexity 1 21 0 487 276 168 5 chr5 153214005 153214208 -46415942 + MIR SINE MIR 26 261 -1 2512 65 0 7 chr5 153215095 153215405 -46414745 - AluY SINE Alu -3 308 1 1963 134 49 0 chr5 153215453 153215737 -46414413 - AluSx SINE Alu -12 300 3 352 284 169 7 chr5 153215808 153215956 -46414194 + MER5A DNA MER1_type 12 183 -6 235 296 86 20 chr5 153216457 153216609 -46413541 + MIR SINE MIR 99 260 -2 383 316 78 10 chr5 153217120 153217313 -46412837 + MIR SINE MIR 57 262 0 2449 48 42 0 chr5 153217567 153217856 -46412294 + AluY SINE Alu 1 301 -10 2209 116 0 0 chr5 153217863 153218164 -46411986 + AluSq SINE Alu 1 301 -12 2274 96 3 10 chr5 153219242 153219556 -46410594 + AluSq SINE Alu 1 312 -1 252 297 11 11 chr5 153220439 153220530 -46409620 - MIR SINE MIR -126 136 46 303 227 80 0 chr5 153222546 153222621 -46407529 - L3b LINE CR1 -80 1503 1423 2234 98 20 3 chr5 153222781 153223077 -46407073 - AluSx SINE Alu -10 302 2 21 36 0 0 chr5 153225319 153225347 -46404803 + AT_rich Low_complexity Low_complexity 1 28 0 1862 141 69 3 chr5 153225583 153225874 -46404276 + AluJb SINE Alu 1 310 -2 2493 73 0 0 chr5 153226285 153226586 -46403564 + AluSg SINE Alu 1 301 -9 967 268 93 10 chr5 153227727 153228290 -46401860 + Tigger8 DNA MER2_type 1 663 -3 225 0 0 0 chr5 153228701 153228726 -46401424 + (TGGGGG)n Simple_repeat Simple_repeat 2 26 0 932 181 32 5 chr5 153230461 153230649 -46399501 - AluJb SINE Alu 0 312 120 2536 67 0 0 chr5 153231009 153231306 -46398844 - AluY SINE Alu -14 297 1 25 0 0 0 chr5 153231519 153231544 -46398606 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr5 153231750 153231772 -46398378 + (A)n Simple_repeat Simple_repeat 1 22 0 29 0 0 0 chr5 153232149 153232178 -46397972 + AT_rich Low_complexity Low_complexity 1 29 0 2545 84 0 0 chr5 153232430 153232738 -46397412 - AluSx SINE Alu -4 308 1 616 153 81 0 chr5 153233244 153233355 -46396795 + LTR24C LTR ERV1 516 635 0 307 283 40 30 chr5 153233502 153233788 -46396362 + L1MEc LINE L1 1342 1488 -4935 182 305 34 0 chr5 153235062 153235121 -46395029 + MIR SINE MIR 196 256 -6 207 0 0 0 chr5 153236988 153237011 -46393139 + (CAA)n Simple_repeat Simple_repeat 2 24 0 408 279 97 42 chr5 153237185 153237350 -46392800 - LTR67 LTR ERVL -382 175 2 259 327 59 0 chr5 153237385 153237486 -46392664 - MIR SINE MIR 0 262 156 340 203 0 16 chr5 153237531 153237595 -46392555 + MER81 DNA DNA 11 73 -41 476 243 53 53 chr5 153237658 153237826 -46392324 + MIR SINE MIR 57 227 -35 2141 108 3 3 chr5 153237826 153238133 -46392017 - AluSq SINE Alu -6 307 1 476 243 53 53 chr5 153238133 153238170 -46391980 + MIR SINE MIR 226 262 0 1919 114 10 7 chr5 153238439 153238729 -46391421 + AluSx SINE Alu 1 291 -21 925 196 13 45 chr5 153238870 153239094 -46391056 + L1ME1 LINE L1 43 259 -6137 2011 123 3 0 chr5 153239264 153239557 -46390593 - AluSx SINE Alu -18 294 1 846 233 58 19 chr5 153239558 153239764 -46390386 - MER58A DNA MER1_type -8 216 3 3779 246 81 36 chr5 153239764 153240915 -46389235 + L1ME1 LINE L1 630 1859 -4537 2096 102 0 0 chr5 153240915 153241200 -46388950 + AluSc SINE Alu 21 305 -4 3779 246 81 36 chr5 153241200 153241488 -46388662 + L1ME1 LINE L1 1859 2133 -4263 526 237 8 0 chr5 153241489 153241607 -46388543 + L1MB7 LINE L1 6010 6128 -56 26 30 0 0 chr5 153241607 153241640 -46388510 + AT_rich Low_complexity Low_complexity 1 33 0 294 93 0 0 chr5 153241693 153241736 -46388414 + MADE1 DNA Mariner 1 43 -37 593 165 39 8 chr5 153241971 153242098 -46388052 - MER41B LTR ERV1 -88 547 417 1793 126 10 31 chr5 153242143 153242436 -46387714 - AluJo SINE Alu -25 287 1 287 209 0 0 chr5 153242437 153242504 -46387646 + L1MB8 LINE L1 6112 6178 0 391 161 0 32 chr5 153242515 153242608 -46387542 + L1ME1 LINE L1 2143 2232 -4164 1909 134 28 0 chr5 153242629 153242919 -46387231 + AluSx SINE Alu 1 298 -14 3116 197 51 5 chr5 153243029 153243700 -46386450 + L1ME1 LINE L1 5529 6230 -5 464 209 38 19 chr5 153243798 153243956 -46386194 + Charlie7 DNA MER1_type 2446 2606 -6 2257 125 6 8 chr5 153244085 153244438 -46385712 + MER41B LTR ERV1 196 547 -88 2061 105 171 23 chr5 153244885 153245237 -46384913 + MSTA LTR MaLR 1 404 -24 394 103 39 77 chr5 153245237 153245315 -46384835 + MSTA LTR MaLR 354 428 0 1672 104 19 23 chr5 153245977 153246237 -46383913 + L1PA10 LINE L1 5907 6165 -3 252 0 0 0 chr5 153246463 153246491 -46383659 + (T)n Simple_repeat Simple_repeat 1 28 0 648 348 29 11 chr5 153246497 153246770 -46383380 + MLT1K LTR MaLR 75 352 -236 294 220 0 99 chr5 153246796 153246887 -46383263 - MIR SINE MIR -31 231 150 1074 250 32 4 chr5 153246896 153247144 -46383006 + MIR SINE MIR 4 258 -4 429 259 54 68 chr5 153247145 153247271 -46382879 - MIR SINE MIR -106 156 31 2480 61 0 3 chr5 153247271 153247581 -46382569 - AluY SINE Alu -2 309 1 429 259 54 68 chr5 153247581 153247601 -46382549 - MIR SINE MIR -231 31 12 413 213 19 65 chr5 153247615 153247770 -46382380 + MLT1K LTR MaLR 350 497 -91 1562 83 13 22 chr5 153247780 153248010 -46382140 - L1MA2 LINE L1 -4 6300 6073 257 151 170 0 chr5 153248233 153248286 -46381864 - L2 LINE L2 0 3272 3211 2255 92 0 7 chr5 153248431 153248734 -46381416 + AluSx SINE Alu 1 301 -11 545 271 115 49 chr5 153250066 153250413 -46379737 - L2 LINE L2 0 3313 2944 470 310 18 0 chr5 153250499 153250612 -46379538 - L2 LINE L2 -8 3305 3191 2121 132 0 0 chr5 153250954 153251258 -46378892 + AluSx SINE Alu 1 304 -8 590 328 62 12 chr5 153251282 153251526 -46378624 + MIR SINE MIR 6 261 -1 431 366 54 0 chr5 153252050 153252236 -46377914 + MIR SINE MIR 23 218 -44 1627 166 3 46 chr5 153252528 153252854 -46377296 - AluJo SINE Alu 0 312 1 457 247 176 11 chr5 153252993 153253175 -46376975 - L2 LINE L2 -89 3224 3013 299 353 29 39 chr5 153253509 153253713 -46376437 - MIR SINE MIR 0 262 61 591 296 19 12 chr5 153253714 153253876 -46376274 - MIR SINE MIR -90 172 10 2192 93 3 3 chr5 153254709 153255019 -46375131 + AluSp SINE Alu 1 310 -3 181 355 37 9 chr5 153255111 153255218 -46374932 - MIR SINE MIR -55 153 44 399 162 0 0 chr5 153255456 153255524 -46374626 - AluJ/FRAM SINE Alu -5 297 230 2110 172 63 29 chr5 153255524 153255937 -46374213 + MER66B LTR ERV1 1 427 -59 281 209 0 0 chr5 153255930 153255973 -46374177 - AluSg/x SINE Alu -123 179 137 * 2135 99 14 0 chr5 153256003 153256296 -46373854 - AluSx SINE Alu -15 297 1 237 231 62 0 chr5 153256296 153256361 -46373789 + Charlie8 DNA MER1_type 63 131 -2286 898 156 0 0 chr5 153256361 153256496 -46373654 + AluJo SINE Alu 1 135 -177 714 240 14 0 chr5 153256510 153256656 -46373494 + Charlie8 DNA MER1_type 129 276 -2141 481 283 159 46 chr5 153257619 153257965 -46372185 - L2 LINE L2 -54 3259 2875 636 271 97 64 chr5 153258997 153259383 -46370767 + L2 LINE L2 2674 3085 -228 2127 98 3 0 chr5 153259383 153259668 -46370482 - AluSc SINE Alu -23 286 1 636 271 97 64 chr5 153259668 153259900 -46370250 + L2 LINE L2 3085 3308 -5 848 201 152 69 chr5 153259906 153260269 -46369881 + L1MC4 LINE L1 7525 7917 -125 25 31 0 0 chr5 153260340 153260372 -46369778 + AT_rich Low_complexity Low_complexity 1 32 0 1778 126 7 4 chr5 153260372 153260642 -46369508 + AluSq SINE Alu 7 277 -36 180 0 0 0 chr5 153260645 153260665 -46369485 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 215 308 0 87 chr5 153260710 153260751 -46369399 - MIR SINE MIR -96 112 69 1571 157 3 70 chr5 153260751 153260903 -46369247 + AluJo SINE Alu 3 125 -187 2129 107 3 3 chr5 153260903 153261211 -46368939 + AluSx SINE Alu 1 308 -4 1571 157 3 70 chr5 153261211 153261371 -46368779 + AluJo SINE Alu 125 294 -18 215 308 0 87 chr5 153261371 153261433 -46368717 - MIR SINE MIR -139 69 18 370 270 11 0 chr5 153261864 153261953 -46368197 + L2 LINE L2 2987 3076 -196 184 327 35 18 chr5 153262688 153262801 -46367349 + MIR SINE MIR 37 151 -111 275 274 255 0 chr5 153263436 153263538 -46366612 + L2 LINE L2 3140 3267 -5 568 330 71 6 chr5 153265228 153265474 -46364676 + MIR SINE MIR 5 262 0 247 369 48 10 chr5 153265715 153265818 -46364332 + L3 LINE CR1 437 543 -1034 283 337 11 0 chr5 153265934 153266029 -46364121 + MER103 DNA DNA 71 166 0 954 177 17 11 chr5 153266044 153266219 -46363931 - L1PB4 LINE L1 -5 6151 5976 417 183 226 0 chr5 153266281 153266374 -46363776 + FLAM_A SINE Alu 2 115 -27 394 243 268 47 chr5 153266480 153266756 -46363394 + L3 LINE CR1 575 911 -666 1524 178 3 50 chr5 153266847 153267167 -46362983 + AluJo SINE Alu 1 305 -7 283 354 123 14 chr5 153267324 153267536 -46362614 + L3 LINE CR1 949 1183 -394 2237 86 0 13 chr5 153267570 153267872 -46362278 + AluSg SINE Alu 1 298 -12 539 331 59 40 chr5 153268163 153268435 -46361715 + L3 LINE CR1 1283 1559 -18 420 230 0 0 chr5 153268438 153268512 -46361638 + MER5A DNA MER1_type 9 82 -107 1076 178 40 43 chr5 153268887 153269140 -46361010 - AluJo SINE Alu -12 300 49 742 268 67 25 chr5 153269152 153269391 -46360759 - MIR SINE MIR 0 262 14 24 53 0 0 chr5 153270771 153270809 -46359341 + AT_rich Low_complexity Low_complexity 1 38 0 2159 103 7 0 chr5 153271064 153271365 -46358785 - AluSx SINE Alu -9 303 1 202 302 198 0 chr5 153271440 153271536 -46358614 + MIR SINE MIR 52 166 -96 416 259 45 75 chr5 153271694 153271868 -46358282 - Charlie8 DNA MER1_type -2137 280 111 2084 121 0 3 chr5 153271868 153272175 -46357975 - AluSq SINE Alu -7 306 1 416 259 45 75 chr5 153272175 153272201 -46357949 - Charlie8 DNA MER1_type -2306 111 86 746 281 25 25 chr5 153272205 153272408 -46357742 + MIR SINE MIR 2 204 -58 332 109 0 0 chr5 153272414 153272469 -46357681 + FLAM_A SINE Alu 79 133 0 4357 161 11 26 chr5 153272473 153273284 -46356866 + L1MB1 LINE L1 5324 6122 -46 2007 113 14 7 chr5 153273284 153273577 -46356573 + AluSq SINE Alu 1 295 -18 1985 147 0 0 chr5 153273588 153273900 -46356250 + AluSx SINE Alu 1 312 0 2088 118 3 0 chr5 153273907 153274213 -46355937 + AluSp SINE Alu 1 307 -6 534 221 50 0 chr5 153274275 153274400 -46355750 - L1ME LINE L1 -373 5789 5651 817 191 0 20 chr5 153274508 153274660 -46355490 - AluJb SINE Alu -6 306 158 22 0 0 0 chr5 153274661 153274683 -46355467 + AT_rich Low_complexity Low_complexity 1 22 0 399 146 42 0 chr5 153274683 153274827 -46355323 + (TTATA)n Simple_repeat Simple_repeat 5 154 0 38 0 0 0 chr5 153274827 153274865 -46355285 + AT_rich Low_complexity Low_complexity 1 38 0 2353 57 7 3 chr5 153274882 153275178 -46354972 - AluY SINE Alu -14 297 1 522 166 90 0 chr5 153275509 153275654 -46354496 - MER20B DNA MER1_type -94 689 532 609 261 113 10 chr5 153275770 153275965 -46354185 - MER20B DNA MER1_type -539 244 30 478 152 0 22 chr5 153275965 153276057 -46354093 + L1M4 LINE L1 4995 5084 -1062 204 40 0 0 chr5 153276092 153276117 -46354033 + (CA)n Simple_repeat Simple_repeat 2 26 0 1751 224 35 18 chr5 153276150 153276640 -46353510 + L1M4 LINE L1 4053 4550 -1596 1543 284 82 15 chr5 153276678 153277240 -46352910 - L2 LINE L2 -2 3311 2679 1607 171 16 13 chr5 153277240 153277544 -46352606 - AluJo SINE Alu -7 305 1 1543 284 82 15 chr5 153277544 153277729 -46352421 - L2 LINE L2 -634 2679 2508 387 318 60 13 chr5 153279208 153279359 -46350791 + MIR SINE MIR 8 165 -97 2155 100 0 10 chr5 153279483 153279784 -46350366 + AluSq SINE Alu 1 298 -15 652 153 83 0 chr5 153279823 153279967 -46350183 + L1MD2 LINE L1 6202 6357 -2 192 329 106 0 chr5 153280111 153280196 -46349954 + MIR SINE MIR 169 262 0 309 331 24 24 chr5 153280283 153280407 -46349743 + L1ME4a LINE L1 5808 5931 -190 932 210 127 4 chr5 153280410 153280639 -46349511 + MIR SINE MIR 3 259 -3 228 276 117 35 chr5 153280651 153280796 -46349354 + L1ME4a LINE L1 5939 6095 -26 2073 115 0 3 chr5 153280819 153281115 -46349035 + AluSg SINE Alu 2 296 -14 471 307 98 19 chr5 153282527 153282742 -46347408 + MIR SINE MIR 17 248 -14 280 191 132 0 chr5 153282923 153282991 -46347159 - L2 LINE L2 -49 3223 3147 2085 93 0 7 chr5 153283271 153283551 -46346599 - AluSc SINE Alu -31 278 1 3220 165 28 7 chr5 153283750 153284295 -46345855 - MLT1F1 LTR MaLR 0 567 12 2230 99 0 10 chr5 153284353 153284667 -46345483 - AluSx SINE Alu -1 311 1 1672 184 7 3 chr5 153284698 153285007 -46345143 - AluJo SINE Alu -2 310 1 228 286 209 19 chr5 153285147 153285252 -46344898 + L2 LINE L2 3148 3272 0 655 274 25 0 chr5 153285258 153285415 -46344735 - MIR SINE MIR -70 192 32 235 262 112 19 chr5 153286203 153286310 -46343840 + MIR SINE MIR 33 149 -113 2035 116 0 3 chr5 153286453 153286747 -46343403 + AluSx SINE Alu 3 295 -17 482 282 64 37 chr5 153286763 153286951 -46343199 + Charlie8 DNA MER1_type 73 265 -2152 2062 115 0 16 chr5 153287306 153287611 -46342539 + AluSq SINE Alu 1 300 -13 210 57 29 0 chr5 153287689 153287724 -46342426 + (TTTG)n Simple_repeat Simple_repeat 1 180 0 2188 100 0 11 chr5 153287724 153288004 -46342146 - AluSx SINE Alu -1 315 5 2156 116 0 29 chr5 153288022 153288333 -46341817 - AluSx SINE Alu -10 302 1 21 36 0 0 chr5 153288398 153288426 -46341724 + AT_rich Low_complexity Low_complexity 1 28 0 817 238 11 0 chr5 153288448 153288629 -46341521 + MER58A DNA MER1_type 42 224 0 2322 97 0 47 chr5 153288748 153288889 -46341261 + AluSq SINE Alu 1 147 -166 2278 84 0 0 chr5 153288889 153289202 -46340948 + AluY SINE Alu 8 320 0 2322 97 0 47 chr5 153289202 153289379 -46340771 + AluSq SINE Alu 147 305 -8 294 253 99 99 chr5 153290095 153290248 -46339902 + MIR3 SINE MIR 1 156 -52 836 229 5 0 chr5 153290248 153290436 -46339714 - MER5A DNA MER1_type 0 189 1 294 253 99 99 chr5 153290436 153290484 -46339666 + MIR3 SINE MIR 155 202 -6 2276 128 0 22 chr5 153291942 153292309 -46337841 - MER47A DNA MER2_type 0 366 8 201 258 0 0 chr5 153292379 153292445 -46337705 + GA-rich Low_complexity Low_complexity 4 69 0 2054 133 4 0 chr5 153292514 153292793 -46337357 + AluSx SINE Alu 1 280 -32 208 154 26 0 chr5 153292824 153292863 -46337287 + GA-rich Low_complexity Low_complexity 3 42 0 2093 102 78 0 chr5 153293058 153293342 -46336808 - AluSg SINE Alu -4 306 1 180 0 0 0 chr5 153294402 153294422 -46335728 + (CAGCC)n Simple_repeat Simple_repeat 2 21 0 294 251 181 84 chr5 153294499 153294662 -46335488 + MIR SINE MIR 3 196 -66 2469 94 0 0 chr5 153294662 153294971 -46335179 - AluSg SINE Alu -1 309 1 294 251 181 84 chr5 153294971 153295034 -46335116 + MIR SINE MIR 196 251 -11 231 274 103 60 chr5 153295373 153295473 -46334677 + MIR3 SINE MIR 39 146 -62 1794 175 37 65 chr5 153295473 153295874 -46334276 + MLT1B LTR MaLR 1 390 0 231 274 103 60 chr5 153295874 153295890 -46334260 + MIR3 SINE MIR 146 160 -48 614 300 42 0 chr5 153296218 153296421 -46333729 - MIR SINE MIR -8 254 45 339 300 20 44 chr5 153296806 153297056 -46333094 + L1ME3A LINE L1 4181 4424 -1722 721 227 8 0 chr5 153297069 153297232 -46332918 + MLT1B LTR MaLR 188 354 -42 1849 162 17 3 chr5 153297233 153297523 -46332627 + AluSx SINE Alu 1 294 -18 2278 124 18 71 chr5 153297559 153298009 -46332141 - MSTB1 LTR MaLR 0 432 7 1184 185 44 35 chr5 153298049 153298276 -46331874 + AluJo SINE Alu 50 278 -34 1326 273 47 47 chr5 153298308 153298413 -46331737 + L1ME3A LINE L1 4490 4594 -1568 2550 43 3 3 chr5 153298413 153298713 -46331437 - AluY SINE Alu -11 300 1 1326 273 47 47 chr5 153298713 153299063 -46331087 + L1ME3A LINE L1 4594 4943 -1219 2089 135 0 7 chr5 153299063 153299400 -46330750 + AluSx SINE Alu 7 312 0 1326 273 47 47 chr5 153299400 153299617 -46330533 + L1ME3A LINE L1 4943 5159 -1003 2383 84 17 0 chr5 153299617 153299916 -46330234 + AluSg SINE Alu 1 304 -6 1326 273 47 47 chr5 153299916 153300171 -46329979 + L1ME3A LINE L1 5159 5413 -749 1945 150 13 10 chr5 153300171 153300477 -46329673 + AluJo SINE Alu 1 307 -5 1326 273 47 47 chr5 153300477 153300772 -46329378 + L1ME3A LINE L1 5413 5716 -446 232 229 16 0 chr5 153300773 153300834 -46329316 - MER96 DNA MER1_type? 0 175 114 1248 250 105 36 chr5 153300895 153301019 -46329131 + MLT1D LTR MaLR 3 117 -388 2514 39 0 0 chr5 153301019 153301329 -46328821 - AluY SINE Alu 0 310 1 1248 250 105 36 chr5 153301329 153301671 -46328479 + MLT1D LTR MaLR 117 502 -3 661 229 69 5 chr5 153301707 153301931 -46328219 + L1ME3A LINE L1 5710 5947 -223 1002 237 134 88 chr5 153302535 153302624 -46327526 + HAL1 LINE L1 7 90 -2417 2307 93 13 0 chr5 153302624 153302925 -46327225 + AluSp SINE Alu 1 305 -8 1002 237 134 88 chr5 153302925 153303177 -46326973 + HAL1 LINE L1 90 329 -2178 2450 137 53 94 chr5 153303177 153303688 -46326462 + LTR2B LTR ERV1 1 490 0 1002 237 134 88 chr5 153303688 153303970 -46326180 + HAL1 LINE L1 329 660 -1847 199 164 33 98 chr5 153305072 153305133 -46325017 - MIR SINE MIR 0 262 206 * 459 218 35 0 chr5 153305106 153305193 -46324957 - L2 LINE L2 -36 3277 3188 279 265 14 182 chr5 153305274 153305356 -46324794 + MIR SINE MIR 20 114 -148 1866 170 3 13 chr5 153305356 153305667 -46324483 - AluJo SINE Alu 0 312 5 279 265 14 182 chr5 153305667 153305875 -46324275 + MIR SINE MIR 114 261 -1 1680 96 0 9 chr5 153305919 153306148 -46324002 - AluSc SINE Alu 0 309 83 1866 107 110 29 chr5 153306564 153306909 -46323241 - THE1C LTR MaLR -2 373 1 1036 157 0 13 chr5 153306989 153307126 -46323024 + AluJb SINE Alu 1 137 -175 2430 97 0 3 chr5 153307126 153307435 -46322715 + AluSq SINE Alu 1 308 -5 1036 157 0 13 chr5 153307435 153307456 -46322694 + AluJb SINE Alu 137 157 -155 189 303 61 15 chr5 153308107 153308173 -46321977 + L2 LINE L2 3174 3242 -30 504 278 84 21 chr5 153308175 153308366 -46321784 - LTR33 LTR ERVL 0 521 319 692 249 6 0 chr5 153308404 153308573 -46321577 - LTR33 LTR ERVL -351 170 1 457 317 75 0 chr5 153308676 153308875 -46321275 - MIR SINE MIR -1 261 48 396 103 0 0 chr5 153308885 153308943 -46321207 + (TTCA)n Simple_repeat Simple_repeat 3 60 0 1961 145 3 7 chr5 153308943 153309228 -46320922 - AluSx SINE Alu -26 286 1 265 279 27 34 chr5 153309249 153309396 -46320754 - L1MC4 LINE L1 0 8042 7897 4078 173 15 48 chr5 153309425 153309626 -46320524 - L1MB3 LINE L1 -2 6181 5975 1911 84 28 99 chr5 153309626 153309930 -46320220 + AluSg SINE Alu 1 282 -28 228 35 0 0 chr5 153309930 153309959 -46320191 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 1911 84 28 99 chr5 153309959 153309976 -46320174 + AluSg SINE Alu 282 299 -11 4078 173 15 48 chr5 153309976 153310652 -46319498 - L1MB3 LINE L1 -208 5975 5332 2096 128 3 3 chr5 153310652 153310950 -46319200 - AluSx SINE Alu -14 298 1 4078 173 15 48 chr5 153310950 153310980 -46319170 - L1MB3 LINE L1 -851 5332 5303 383 242 44 101 chr5 153311027 153311241 -46318909 - L1MC5 LINE L1 -227 7734 7534 2479 97 0 0 chr5 153311241 153311552 -46318598 - AluSp SINE Alu -1 312 2 383 242 44 101 chr5 153311552 153311585 -46318565 - L1MC5 LINE L1 -427 7534 7501 1099 150 0 0 chr5 153311600 153311760 -46318390 - AluJb SINE Alu -19 293 134 1834 145 72 0 chr5 153311760 153312050 -46318100 - AluSx SINE Alu -1 311 1 2500 77 0 6 chr5 153312096 153312409 -46317741 - AluY SINE Alu 0 311 1 293 277 71 11 chr5 153312440 153312627 -46317523 - L1MC5 LINE L1 -520 7493 7269 2619 52 7 0 chr5 153312754 153313061 -46317089 + AluY SINE Alu 1 309 -2 267 31 0 0 chr5 153313382 153313414 -46316736 + (T)n Simple_repeat Simple_repeat 1 32 0 359 91 18 0 chr5 153363944 153364027 -46266123 + AluSp/q SINE Alu 230 313 0 1789 135 76 0 chr5 153364151 153364439 -46265711 + AluSx SINE Alu 1 310 -2 409 273 109 88 chr5 153364618 153364989 -46265161 + L2 LINE L2 2721 3093 -179 745 220 262 21 chr5 153365037 153365457 -46264693 + MLT1H1 LTR MaLR 37 555 0 184 387 67 0 chr5 153365457 153365532 -46264618 + L2 LINE L2 3106 3185 -87 189 0 0 0 chr5 153365534 153365555 -46264595 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2062 107 14 14 chr5 153365557 153365846 -46264304 - AluSg SINE Alu -21 289 1 370 306 33 0 chr5 153366945 153367066 -46263084 + L2 LINE L2 2925 3049 -223 275 250 69 0 chr5 153367151 153367223 -46262927 - MIR SINE MIR 0 262 186 565 272 68 16 chr5 153367258 153367449 -46262701 - MIR SINE MIR -49 213 13 2209 79 28 14 chr5 153367541 153367831 -46262319 + AluSx SINE Alu 1 294 -18 1599 199 3 19 chr5 153367936 153368252 -46261898 + AluJo SINE Alu 1 311 -1 276 218 81 11 chr5 153368270 153368357 -46261793 - MER113 DNA MER1_type? -423 98 6 1430 101 48 0 chr5 153368568 153368777 -46261373 - MER39B LTR ERV1 0 653 435 18640 24 0 0 chr5 153368777 153370931 -46259219 - L1P LINE L1 -1218 4928 2775 3153 38 31 2 chr5 153370907 153371329 -46258821 + L1P LINE L1 4912 5345 -801 * 737 109 0 0 chr5 153371431 153371532 -46258618 + AluSc SINE Alu 199 299 -10 826 185 38 49 chr5 153371632 153371816 -46258334 + MER3 DNA MER1_type 25 206 -3 367 254 31 46 chr5 153371823 153371953 -46258197 + MLT1J LTR MaLR 324 451 -60 2141 85 53 0 chr5 153371977 153372260 -46257890 - AluSx SINE Alu -14 298 1 679 234 0 0 chr5 153372506 153372630 -46257520 - MLT1F1 LTR MaLR -12 555 432 1601 99 24 172 chr5 153372630 153372882 -46257268 - AluJb SINE Alu 0 342 158 2234 44 6 22 chr5 153372882 153373198 -46256952 - AluY SINE Alu 0 311 1 1601 99 24 172 chr5 153373198 153373335 -46256815 - AluJb SINE Alu -184 158 2 25 0 0 0 chr5 153373574 153373599 -46256551 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 153374336 153374366 -46255784 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 153374662 153374684 -46255466 + AT_rich Low_complexity Low_complexity 1 22 0 1175 171 38 5 chr5 153375211 153375422 -46254728 + LOR1-int LTR ERV1 6880 7097 -1023 4237 137 25 12 chr5 153375426 153376111 -46254039 + MER72 LTR ERV1 1 694 -28 862 237 123 103 chr5 153376507 153376896 -46253254 + L1MC4 LINE L1 7205 7585 -457 2406 48 10 3 chr5 153376896 153377187 -46252963 + AluY SINE Alu 2 294 -17 862 237 123 103 chr5 153377187 153377619 -46252531 + L1MC4 LINE L1 7585 8042 0 2220 108 17 0 chr5 153378348 153378644 -46251506 + AluSq SINE Alu 1 301 -12 273 310 16 54 chr5 153379399 153379528 -46250622 + L1ME LINE L1 5574 5697 -424 319 224 11 66 chr5 153380910 153381093 -46249057 + T-rich Low_complexity Low_complexity 6 178 0 286 242 53 8 chr5 153381042 153381174 -46248976 + (TTTG)n Simple_repeat Simple_repeat 2 139 0 * 286 250 17 11 chr5 153381178 153381354 -46248796 + CT-rich Low_complexity Low_complexity 3 179 0 402 266 19 15 chr5 153381414 153381729 -46248421 + CT-rich Low_complexity Low_complexity 1 316 0 236 335 0 0 chr5 153381733 153381837 -46248313 + T-rich Low_complexity Low_complexity 5 173 0 231 140 30 30 chr5 153381848 153381948 -46248202 + T-rich Low_complexity Low_complexity 4 103 0 6425 45 3 52 chr5 153382186 153383067 -46247083 + SVA Other Other 549 1386 0 2276 96 7 3 chr5 153383092 153383393 -46246757 + AluSp SINE Alu 1 302 -11 1033 181 0 6 chr5 153383569 153383740 -46246410 + AluJo SINE Alu 120 289 -23 941 224 185 10 chr5 153383757 153383808 -46246342 - L1MB8 LINE L1 -63 6115 6074 2229 113 0 10 chr5 153383808 153384110 -46246040 - AluSx SINE Alu -12 300 2 941 224 185 10 chr5 153384110 153384361 -46245789 - L1MB8 LINE L1 -104 6074 5760 2227 102 0 3 chr5 153384700 153384993 -46245157 + AluSx SINE Alu 1 292 -20 418 260 248 8 chr5 153385375 153385625 -46244525 + L2 LINE L2 2995 3304 -9 1136 241 202 16 chr5 153385881 153386375 -46243775 + L2 LINE L2 1232 1817 -1497 3345 194 68 163 chr5 153386379 153386407 -46243743 - L1MCb LINE L1 -4851 1194 1165 1690 129 157 10 chr5 153386407 153386701 -46243449 - MER44D DNA MER2_type -2 607 1 3345 194 68 163 chr5 153386701 153386731 -46243419 - L1MCb LINE L1 -4880 1165 1134 1704 148 16 59 chr5 153386731 153387035 -46243115 - AluJb SINE Alu -21 291 1 3345 194 68 163 chr5 153387035 153387234 -46242916 - L1MCb LINE L1 -4911 1134 918 2446 83 3 0 chr5 153387234 153387535 -46242615 - AluSp SINE Alu -11 302 1 3345 194 68 163 chr5 153387535 153388619 -46241531 - L1MCb LINE L1 -5127 918 38 3103 249 137 16 chr5 153388622 153389768 -46240382 + L2 LINE L2 1822 3154 -159 1574 163 0 90 chr5 153389768 153390111 -46240039 - AluJb SINE Alu 0 312 1 3103 249 137 16 chr5 153390111 153390294 -46239856 + L2 LINE L2 3154 3313 0 2127 81 0 52 chr5 153391388 153391696 -46238454 + AluSx SINE Alu 6 297 -15 1548 134 75 10 chr5 153392158 153392450 -46237700 + L1MC3 LINE L1 7475 7785 0 35 0 0 0 chr5 153392475 153392510 -46237640 + AT_rich Low_complexity Low_complexity 1 35 0 2037 115 3 7 chr5 153392628 153392924 -46237226 + AluSg SINE Alu 1 295 -15 1647 151 24 17 chr5 153393029 153393321 -46236829 + AluJo SINE Alu 1 294 -18 2438 54 0 0 chr5 153393973 153394270 -46235880 - AluY SINE Alu -13 298 2 198 71 0 0 chr5 153394907 153394935 -46235215 + (CA)n Simple_repeat Simple_repeat 1 28 0 801 295 26 4 chr5 153395364 153395591 -46234559 - MIR SINE MIR -2 260 29 2149 126 0 0 chr5 153396287 153396596 -46233554 + AluSx SINE Alu 1 309 -3 203 167 0 28 chr5 153396600 153396636 -46233514 - MIR SINE MIR -11 251 217 1939 129 14 0 chr5 153396653 153396939 -46233211 - AluSx SINE Alu -22 290 1 6228 75 31 35 chr5 153396964 153398784 -46231366 + SVA Other Other 17 1386 0 454 244 61 0 chr5 153399394 153399509 -46230641 - L2 LINE L2 -1 3312 3191 202 162 0 0 chr5 153399618 153399655 -46230495 - L2 LINE L2 0 3313 3277 1264 199 29 120 chr5 153399727 153400212 -46229938 - MER34B LTR ERV1 0 565 128 608 220 15 8 chr5 153400212 153400344 -46229806 + FLAM_A SINE Alu 1 133 0 1264 199 29 120 chr5 153400344 153400375 -46229775 - MER34B LTR ERV1 -437 128 96 1239 192 119 58 chr5 153400375 153400616 -46229534 - MLT1A1 LTR MaLR 0 365 95 1602 137 245 26 chr5 153400616 153400967 -46229183 + MSTA LTR MaLR 1 428 0 1239 192 119 58 chr5 153400967 153401069 -46229081 - MLT1A1 LTR MaLR -270 95 1 424 214 45 27 chr5 153401070 153401182 -46228968 - MER34 LTR ERV1 -428 114 1 2145 87 0 29 chr5 153401215 153401525 -46228625 + AluSq SINE Alu 1 301 -12 1878 131 3 34 chr5 153401553 153401873 -46228277 + AluSg SINE Alu 1 310 0 826 215 0 0 chr5 153402229 153402392 -46227758 + FAM SINE Alu 10 172 -13 410 224 200 12 chr5 153402396 153402561 -46227589 + MER117 DNA MER1_type 2 197 0 487 221 0 26 chr5 153402895 153403008 -46227142 - MIR SINE MIR -65 143 34 510 323 10 35 chr5 153403480 153403678 -46226472 + L2 LINE L2 2575 2767 -547 186 103 0 0 chr5 153403714 153403743 -46226407 + (TG)n Simple_repeat Simple_repeat 2 30 0 863 146 0 0 chr5 153403911 153404041 -46226109 + AluJ SINE Alu 3 132 -170 493 156 0 73 chr5 153404051 153404147 -46226003 + AluJ SINE Alu 198 286 -26 23 0 0 0 chr5 153404264 153404287 -46225863 + AT_rich Low_complexity Low_complexity 1 23 0 2128 99 0 3 chr5 153404438 153404756 -46225394 - AluSx SINE Alu 0 312 3 1977 105 49 0 chr5 153405522 153405807 -46224343 + AluSx SINE Alu 1 299 -13 1292 147 38 121 chr5 153405855 153406195 -46223955 - AluSx SINE Alu 0 312 1 315 333 43 5 chr5 153406221 153406407 -46223743 - L1MC4a LINE L1 -1865 5943 5751 213 152 0 22 chr5 153406431 153406477 -46223673 + (TAA)n Simple_repeat Simple_repeat 1 45 0 706 253 176 55 chr5 153406858 153407599 -46222551 + L2 LINE L2 2379 3265 -48 240 86 0 0 chr5 153407609 153407644 -46222506 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 1008 79 13 7 chr5 153408158 153408310 -46221840 + L1PA13 LINE L1 6011 6163 0 2275 95 0 9 chr5 153408310 153408625 -46221525 + AluSx SINE Alu 1 312 0 329 291 156 21 chr5 153408971 153409112 -46221038 - MIR SINE MIR 0 262 103 320 225 155 80 chr5 153409870 153410057 -46220093 - L2 LINE L2 0 3313 3113 24 32 0 0 chr5 153410357 153410388 -46219762 + AT_rich Low_complexity Low_complexity 1 31 0 2043 115 0 3 chr5 153410391 153410679 -46219471 - AluSx SINE Alu -25 287 1 201 39 0 0 chr5 153411109 153411135 -46219015 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 814 74 318 6 chr5 153411135 153411311 -46218839 - L1MA2 LINE L1 -167 6137 5907 23 0 0 0 chr5 153411311 153411334 -46218816 + AT_rich Low_complexity Low_complexity 1 23 0 1653 163 0 33 chr5 153411339 153411639 -46218511 - AluJo SINE Alu -22 290 1 1397 191 138 25 chr5 153412283 153412639 -46217511 - MSTD LTR MaLR 0 396 1 729 169 8 8 chr5 153413148 153413272 -46216878 + FLAM_C SINE Alu 1 124 -9 304 298 76 15 chr5 153413724 153413855 -46216295 + MIR3 SINE MIR 20 158 -50 341 221 19 29 chr5 153413872 153413976 -46216174 + MER113 DNA MER1_type? 17 119 -402 2068 121 0 7 chr5 153414056 153414353 -46215797 - AluSx SINE Alu -17 295 1 258 192 0 0 chr5 153414529 153414581 -46215569 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 1430 102 0 0 chr5 153414754 153414941 -46215209 - AluSq SINE Alu -126 187 1 1465 199 84 115 chr5 153414941 153415488 -46214662 + L1ME2 LINE L1 5634 6163 -1 408 264 8 47 chr5 153415494 153415623 -46214527 + MER5A DNA MER1_type 60 183 -6 263 300 144 0 chr5 153415735 153415867 -46214283 - MIR SINE MIR -66 196 43 252 77 0 0 chr5 153415882 153415921 -46214229 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 205 250 0 0 chr5 153415930 153415978 -46214172 - L2 LINE L2 -12 3301 3254 2065 133 3 0 chr5 153416734 153417042 -46213108 + AluJb SINE Alu 1 309 -3 2795 178 8 2 chr5 153417052 153417551 -46212599 - L1MB7 LINE L1 -23 6161 5660 820 139 0 22 chr5 153417559 153417696 -46212454 + FLAM_C SINE Alu 9 142 -1 864 181 12 6 chr5 153417696 153417856 -46212294 - L1MB7 LINE L1 -515 5669 5509 235 244 89 67 chr5 153418039 153418174 -46211976 - MLT1K LTR MaLR -39 549 412 210 280 0 0 chr5 153418174 153418224 -46211926 + C-rich Low_complexity Low_complexity 1 50 0 1704 188 3 0 chr5 153418257 153418566 -46211584 - AluJb SINE Alu -2 310 1 407 289 27 17 chr5 153418586 153418827 -46211323 - MLT1K LTR MaLR -162 426 141 402 314 64 12 chr5 153419405 153419577 -46210573 - MIR3 SINE MIR -8 200 20 704 297 93 35 chr5 153420070 153420289 -46209861 - L1MB7 LINE L1 -841 5305 5055 1395 182 0 83 chr5 153420289 153420613 -46209537 - AluJo SINE Alu -13 299 3 704 297 93 35 chr5 153420613 153420760 -46209390 - L1MB7 LINE L1 -1091 5055 4918 2309 90 0 0 chr5 153420854 153421153 -46208997 - AluSq SINE Alu -12 301 3 1726 205 120 92 chr5 153421168 153421276 -46208874 + MLT1F1 LTR MaLR 9 112 -455 1709 162 3 29 chr5 153421276 153421584 -46208566 - AluJo SINE Alu -12 300 1 1726 205 120 92 chr5 153421584 153421881 -46208269 + MLT1F1 LTR MaLR 112 436 -131 1528 127 26 101 chr5 153421881 153422017 -46208133 + AluJb SINE Alu 1 146 -191 2723 13 0 0 chr5 153422017 153422326 -46207824 + AluY SINE Alu 1 309 -2 1528 127 26 101 chr5 153422326 153422549 -46207601 + AluJb SINE Alu 146 337 0 1726 205 120 92 chr5 153422549 153422673 -46207477 + MLT1F1 LTR MaLR 436 555 -12 2022 88 53 0 chr5 153422919 153423202 -46206948 + AluSx SINE Alu 1 298 -14 373 254 31 46 chr5 153423226 153423356 -46206794 - MLT1J LTR MaLR -60 451 324 800 185 38 49 chr5 153423363 153423547 -46206603 - MER3 DNA MER1_type -3 206 25 583 293 68 41 chr5 153423593 153423646 -46206504 - MLT1J LTR MaLR -235 276 226 2231 91 3 0 chr5 153423646 153423943 -46206207 - AluSc SINE Alu -11 298 1 583 293 68 41 chr5 153423943 153424155 -46205995 - MLT1J LTR MaLR -285 226 4 672 253 197 24 chr5 153425132 153425558 -46204592 + L1ME4a LINE L1 5557 6065 -56 668 185 26 13 chr5 153425607 153425629 -46204521 + L1ME LINE L1 5420 5440 -724 1694 141 33 13 chr5 153425629 153425957 -46204193 + AluSx SINE Alu 1 312 0 668 185 26 13 chr5 153425957 153426085 -46204065 + L1ME LINE L1 5440 5572 -592 978 114 256 0 chr5 153426085 153426261 -46203889 - AluSq SINE Alu -92 221 1 320 149 75 30 chr5 153426289 153426356 -46203794 + L1ME3 LINE L1 6047 6116 -46 28 0 0 0 chr5 153426371 153426399 -46203751 + AT_rich Low_complexity Low_complexity 1 28 0 2180 89 7 0 chr5 153426402 153426695 -46203455 - AluSp SINE Alu -18 295 1 1499 118 57 0 chr5 153426718 153426947 -46203203 + AluSx SINE Alu 38 279 -33 2035 115 28 0 chr5 153427441 153427727 -46202423 + AluSx SINE Alu 1 294 -18 1504 199 3 19 chr5 153427832 153428148 -46202002 + AluJo SINE Alu 1 311 -1 253 218 81 11 chr5 153428166 153428253 -46201897 - MER113 DNA MER1_type? -423 98 6 1414 101 48 0 chr5 153428464 153428673 -46201477 - MER39B LTR ERV1 0 653 435 18522 22 0 0 chr5 153428673 153430821 -46199329 - L1PA3 LINE L1 -1218 4928 2781 7993 16 0 0 chr5 153430821 153432041 -46198109 + L1PA3 LINE L1 4933 6152 -3 21 0 0 0 chr5 153432041 153432062 -46198088 + AT_rich Low_complexity Low_complexity 1 21 0 2856 121 36 9 chr5 153432062 153432094 -46198056 - MER39B LTR ERV1 -203 450 420 1855 138 3 0 chr5 153432094 153432399 -46197751 + AluSx SINE Alu 1 306 0 2856 121 36 9 chr5 153432399 153432803 -46197347 - MER39B LTR ERV1 -233 420 1 2157 115 0 3 chr5 153433152 153433464 -46196686 + AluSq SINE Alu 1 311 -2 185 132 26 0 chr5 153433491 153433529 -46196621 + T-rich Low_complexity Low_complexity 4 42 0 243 292 0 0 chr5 153433975 153434040 -46196110 - MIR SINE MIR -12 250 186 422 204 65 0 chr5 153434075 153434168 -46195982 - L2 LINE L2 -5 3308 3210 1451 142 5 0 chr5 153434175 153434393 -46195757 + AluSx SINE Alu 1 219 -93 227 133 22 0 chr5 153434397 153434442 -46195708 + G-rich Low_complexity Low_complexity 2 47 0 * 728 171 18 12 chr5 153434438 153434608 -46195542 + GA-rich Low_complexity Low_complexity 2 172 0 193 300 160 20 chr5 153434670 153434770 -46195380 + MIR SINE MIR 30 143 -119 383 221 19 39 chr5 153434857 153434961 -46195189 + MIR SINE MIR 161 262 0 204 188 31 109 chr5 153434962 153435004 -46195146 - MIR SINE MIR -87 175 131 3154 110 20 67 chr5 153435004 153435049 -46195101 - L1MB3 LINE L1 -7 6176 6130 2257 81 0 3 chr5 153435049 153435346 -46194804 - AluSc SINE Alu -13 296 1 3154 110 20 67 chr5 153435346 153435810 -46194340 - L1MB3 LINE L1 -53 6130 5695 3137 91 16 0 chr5 153435810 153436237 -46193913 + MER57B LTR ERV1 1 434 0 3154 110 20 67 chr5 153436237 153436310 -46193840 - L1MB3 LINE L1 -488 5695 5620 204 188 31 109 chr5 153436310 153436331 -46193819 - MIR SINE MIR -131 131 117 24 32 0 0 chr5 153437006 153437037 -46193113 + AT_rich Low_complexity Low_complexity 1 31 0 2132 103 20 0 chr5 153437039 153437339 -46192811 + AluSq SINE Alu 1 306 -7 712 165 0 0 chr5 153437339 153437454 -46192696 - AluJo/FLAM SINE Alu -186 116 2 1265 147 16 54 chr5 153437465 153437661 -46192489 - L1MB3 LINE L1 -586 5597 5438 2286 79 3 0 chr5 153437661 153437953 -46192197 + AluSp SINE Alu 1 293 -20 1265 147 16 54 chr5 153437953 153438118 -46192032 - L1MB3 LINE L1 -745 5438 5268 1465 130 0 13 chr5 153438803 153439034 -46191116 + AluJb SINE Alu 85 312 0 3269 75 23 0 chr5 153439053 153439495 -46190655 - L1PA10 LINE L1 0 6168 5717 1284 250 81 23 chr5 153439519 153439950 -46190200 + LTR38 LTR ERV1 87 525 -31 180 0 0 0 chr5 153439953 153439973 -46190177 + (CAGAG)n Simple_repeat Simple_repeat 5 24 0 217 310 39 23 chr5 153440115 153440244 -46189906 - MER5A DNA MER1_type -50 139 9 1755 155 3 35 chr5 153440687 153440977 -46189173 + AluJo SINE Alu 6 286 -26 391 235 74 37 chr5 153441139 153441344 -46188806 + MIR SINE MIR 2 262 0 305 273 128 27 chr5 153441958 153442145 -46188005 - MER90 LTR ERV1 -13 601 396 397 276 63 0 chr5 153442284 153442411 -46187739 - LTR65 LTR ERV1 -506 163 29 519 243 68 7 chr5 153442481 153442629 -46187521 - MER91B DNA MER1_type -33 157 1 225 241 66 66 chr5 153442778 153442915 -46187235 + LTR67 LTR ERVL 413 549 -8 180 77 0 0 chr5 153443172 153443198 -46186952 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 202 311 11 22 chr5 153443203 153443293 -46186857 - MIR SINE MIR -108 154 66 2269 95 3 7 chr5 153443294 153443615 -46186535 + AluSp SINE Alu 1 313 0 425 83 14 14 chr5 153443616 153443688 -46186462 + L1MB3 LINE L1 6102 6173 -10 746 267 85 13 chr5 153443847 153444083 -46186067 + MIR SINE MIR 2 254 -8 2448 76 0 3 chr5 153444345 153444646 -46185504 - AluSc SINE Alu -9 300 1 492 229 136 21 chr5 153445021 153445161 -46184989 + MLT1F1 LTR MaLR 193 348 -219 1029 197 89 5 chr5 153445162 153445375 -46184775 - LTR47B LTR ERVL 0 443 213 1445 79 0 0 chr5 153445502 153445680 -46184470 + AluSq SINE Alu 130 307 -6 559 154 40 148 chr5 153445692 153445841 -46184309 + FLAM_C SINE Alu 1 133 0 571 223 48 1 chr5 153445857 153445984 -46184166 + MLT1F1 LTR MaLR 421 567 0 712 226 88 143 chr5 153445987 153446120 -46184030 + MLT2D LTR ERVL 3 142 -272 2080 147 0 3 chr5 153446120 153446433 -46183717 + AluJb SINE Alu 1 312 0 712 226 88 143 chr5 153446433 153446684 -46183466 + MLT2D LTR ERVL 142 366 -48 35 24 0 0 chr5 153446695 153446737 -46183413 + AT_rich Low_complexity Low_complexity 1 42 0 2374 43 0 11 chr5 153446745 153447024 -46183126 + AluY SINE Alu 2 277 -34 1053 113 22 22 chr5 153447024 153447342 -46182808 + (TA)n Simple_repeat Simple_repeat 1 318 0 501 279 86 31 chr5 153447475 153447765 -46182385 - L1MC4a LINE L1 -1814 5994 5689 323 188 0 0 chr5 153451297 153451366 -46178784 - MIR SINE MIR -15 247 179 2344 73 11 0 chr5 153451379 153451666 -46178484 - AluY SINE Alu -1 310 21 491 298 26 7 chr5 153451782 153451933 -46178217 - MIR SINE MIR -93 169 16 411 141 0 0 chr5 153452088 153452161 -46177989 + L1M4 LINE L1 5711 5783 -368 904 159 0 0 chr5 153452201 153452339 -46177811 + FLAM_C SINE Alu 1 138 -5 1673 196 0 3 chr5 153452339 153452647 -46177503 + AluJb SINE Alu 1 307 0 314 151 0 19 chr5 153452693 153452746 -46177404 - L1MC3 LINE L1 -1717 6068 6017 2022 142 65 3 chr5 153452757 153453110 -46177040 + L1MC3 LINE L1 6079 6453 -1332 847 111 38 0 chr5 153453110 153453352 -46176798 + L1MB2 LINE L1 5773 6155 -16 342 0 0 0 chr5 153453352 153453390 -46176760 + (TG)n Simple_repeat Simple_repeat 2 39 0 847 111 38 0 chr5 153453390 153453408 -46176742 + L1MB2 LINE L1 6155 6171 0 2475 91 0 0 chr5 153453416 153453724 -46176426 + AluSc SINE Alu 1 308 -1 2415 34 0 0 chr5 153454007 153454274 -46175876 + AluY SINE Alu 28 294 -17 2177 94 0 0 chr5 153454283 153454550 -46175600 + AluSx SINE Alu 1 267 -45 727 264 85 0 chr5 153454551 153454752 -46175398 - MIR SINE MIR -32 230 13 2040 198 116 36 chr5 153455087 153455588 -46174562 - MLT1F LTR MaLR -1 541 1 523 213 37 0 chr5 153455631 153455739 -46174411 + L2 LINE L2 3201 3312 -1 2178 112 0 55 chr5 153456004 153456334 -46173816 - AluSx SINE Alu 0 312 1 1441 223 205 26 chr5 153456367 153456898 -46173252 + MLT1G LTR MaLR 1 584 -6 341 166 46 160 chr5 153456984 153457159 -46172991 - MLT1K LTR MaLR -82 506 352 377 266 196 53 chr5 153457203 153457586 -46172564 - MLT1L LTR MaLR -13 602 110 272 272 223 10 chr5 153457671 153457774 -46172376 - MLT1K LTR MaLR -367 221 97 316 302 2 96 chr5 153458117 153458294 -46171856 - MIR SINE MIR -63 145 30 2393 94 0 0 chr5 153458524 153458823 -46171327 + AluSx SINE Alu 1 299 -13 222 37 0 0 chr5 153458896 153458923 -46171227 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 186 271 0 0 chr5 153459269 153459328 -46170822 + MIR SINE MIR 96 154 -108 317 275 119 55 chr5 153459571 153459789 -46170361 + MIR SINE MIR 12 243 -19 22 35 0 0 chr5 153460373 153460402 -46169748 + GC_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 153460420 153460446 -46169704 + GC_rich Low_complexity Low_complexity 1 26 0 506 228 56 44 chr5 153461046 153461226 -46168924 - MIR SINE MIR -48 214 33 978 168 6 0 chr5 153461825 153461986 -46168164 + MER105 DNA DNA 1 162 -42 180 111 0 0 chr5 153462210 153462237 -46167913 + (T)n Simple_repeat Simple_repeat 1 27 0 553 184 39 0 chr5 153462253 153462356 -46167794 - MER58B DNA MER1_type -10 331 225 1080 138 19 0 chr5 153462356 153462516 -46167634 + AluJb SINE Alu 132 294 -18 967 186 26 61 chr5 153462516 153462658 -46167492 - MER58B DNA MER1_type -118 223 78 1892 165 13 22 chr5 153462658 153462973 -46167177 + AluJb SINE Alu 1 312 0 967 186 26 61 chr5 153462973 153463013 -46167137 - MER58B DNA MER1_type -263 78 48 2171 128 7 0 chr5 153463013 153463310 -46166840 + AluSx SINE Alu 1 299 -13 967 186 26 61 chr5 153463310 153463357 -46166793 - MER58B DNA MER1_type -293 48 1 214 272 25 12 chr5 153463510 153463591 -46166559 + L2 LINE L2 2752 2833 -481 499 211 9 9 chr5 153463662 153463771 -46166379 - LTR67 LTR ERVL -7 550 442 740 259 46 15 chr5 153463874 153464136 -46166014 - L2 LINE L2 -3 3310 3041 916 209 112 86 chr5 153464266 153464731 -46165419 - L1MC4 LINE L1 0 8042 7566 2220 122 0 0 chr5 153464731 153465027 -46165123 - AluSx SINE Alu -16 296 1 424 176 10 39 chr5 153465315 153465417 -46164733 - L2 LINE L2 -47 3266 3168 291 248 68 45 chr5 153465805 153465938 -46164212 + MIR SINE MIR 119 254 -8 2108 126 11 25 chr5 153466223 153466587 -46163563 - L1MB2 LINE L1 -7 6164 5806 228 292 138 31 chr5 153467444 153467574 -46162576 + MIR3 SINE MIR 37 180 -28 192 220 23 13 chr5 153467684 153467738 -46162412 - MIR SINE MIR -85 123 71 338 193 96 0 chr5 153469981 153470064 -46160086 + MIR SINE MIR 86 176 -86 2193 136 0 3 chr5 153470691 153471001 -46159149 - AluSx SINE Alu -3 309 1 1810 190 0 3 chr5 153473239 153473529 -46156621 + AluJo SINE Alu 1 289 -23 1113 218 136 9 chr5 153473546 153473597 -46156553 - L1MB8 LINE L1 -63 6115 6072 2247 113 0 10 chr5 153473597 153473899 -46156251 - AluSx SINE Alu -12 300 2 1113 218 136 9 chr5 153473899 153474163 -46155987 - L1MB8 LINE L1 -106 6072 5760 2267 99 0 3 chr5 153474502 153474795 -46155355 + AluSx SINE Alu 1 292 -20 336 264 248 8 chr5 153475177 153475427 -46154723 + L2 LINE L2 2995 3304 -9 1003 237 205 16 chr5 153475683 153476176 -46153974 + L2 LINE L2 1232 1817 -1497 3453 191 68 160 chr5 153476180 153476208 -46153942 - L1MCb LINE L1 -4851 1194 1165 1579 133 157 10 chr5 153476208 153476502 -46153648 - MER44D DNA MER2_type -2 607 1 3453 191 68 160 chr5 153476502 153476532 -46153618 - L1MCb LINE L1 -4880 1165 1134 1702 150 16 65 chr5 153476532 153476838 -46153312 - AluJb SINE Alu -21 291 1 3453 191 68 160 chr5 153476838 153477037 -46153113 - L1MCb LINE L1 -4911 1134 918 2461 80 3 0 chr5 153477037 153477337 -46152813 - AluSp SINE Alu -12 301 1 3453 191 68 160 chr5 153477337 153478417 -46151733 - L1MCb LINE L1 -5127 918 38 2748 257 133 12 chr5 153478420 153479566 -46150584 + L2 LINE L2 1822 3154 -159 1783 165 0 43 chr5 153479566 153479888 -46150262 - AluJb SINE Alu -4 308 1 2748 257 133 12 chr5 153479888 153480071 -46150079 + L2 LINE L2 3154 3313 0 2316 82 0 51 chr5 153481163 153481479 -46148671 + AluSx SINE Alu 1 300 -12 1582 129 71 14 chr5 153481941 153482235 -46147915 + L1MC3 LINE L1 7475 7785 0 35 0 0 0 chr5 153482260 153482295 -46147855 + AT_rich Low_complexity Low_complexity 1 35 0 2124 122 3 7 chr5 153482413 153482709 -46147441 + AluSg SINE Alu 1 295 -15 1758 150 24 20 chr5 153482814 153483107 -46147043 + AluJo SINE Alu 1 294 -18 2600 53 0 0 chr5 153483759 153484059 -46146091 - AluY SINE Alu -10 301 2 25 0 0 0 chr5 153484298 153484323 -46145827 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 153485060 153485090 -46145060 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 153485386 153485408 -46144742 + AT_rich Low_complexity Low_complexity 1 22 0 1172 175 38 5 chr5 153485934 153486145 -46144005 + LOR1-int LTR ERV1 6880 7097 -1023 4266 136 25 12 chr5 153486150 153486835 -46143315 + MER72 LTR ERV1 1 694 -28 818 239 120 103 chr5 153487231 153487620 -46142530 + L1MC4 LINE L1 7205 7586 -456 2437 48 10 3 chr5 153487620 153487911 -46142239 + AluY SINE Alu 2 294 -17 818 239 120 103 chr5 153487911 153488345 -46141805 + L1MC4 LINE L1 7586 8042 0 2237 108 17 0 chr5 153489074 153489370 -46140780 + AluSq SINE Alu 1 301 -12 262 310 16 54 chr5 153490125 153490254 -46139896 + L1ME LINE L1 5574 5697 -424 26 50 0 0 chr5 153491236 153491276 -46138874 + AT_rich Low_complexity Low_complexity 1 40 0 1688 161 44 3 chr5 153491592 153491890 -46138260 - AluJb SINE Alu -2 310 1 357 226 95 0 chr5 153491917 153492001 -46138149 - MER5C DNA MER1_type 0 324 233 613 212 35 9 chr5 153492020 153492133 -46138017 - FLAM_A SINE Alu -19 123 8 265 137 428 15 chr5 153492140 153492271 -46137879 - MER5C DNA MER1_type -92 232 48 203 241 69 35 chr5 153492351 153492409 -46137741 - MIR SINE MIR -88 174 115 487 302 73 0 chr5 153492465 153492644 -46137506 + MER117 DNA MER1_type 3 194 -3 992 265 70 39 chr5 153492684 153493042 -46137108 + L2 LINE L2 2944 3312 -1 233 248 0 107 chr5 153493486 153493552 -46136598 + L1ME2 LINE L1 6048 6097 -67 1503 195 27 0 chr5 153493552 153493850 -46136300 - AluJo SINE Alu 0 312 7 233 248 0 107 chr5 153493850 153493904 -46136246 + L1ME2 LINE L1 6097 6155 -9 2011 98 3 11 chr5 153493920 153494238 -46135912 + AluSx SINE Alu 1 316 0 2174 108 0 6 chr5 153496381 153496695 -46133455 + AluSx SINE Alu 1 312 0 1387 150 0 0 chr5 153497518 153497744 -46132406 - AluJb SINE Alu -1 311 86 2384 78 3 0 chr5 153499934 153500240 -46129910 + AluSq SINE Alu 1 307 -6 2188 102 0 0 chr5 153500582 153500877 -46129273 + AluSx SINE Alu 2 296 -16 655 205 30 60 chr5 153500910 153501076 -46129074 - MER20 DNA MER1_type 0 219 59 1064 145 0 0 chr5 153501076 153501235 -46128915 + AluJb SINE Alu 135 293 -19 21 36 0 0 chr5 153501369 153501397 -46128753 + AT_rich Low_complexity Low_complexity 1 28 0 1721 147 3 25 chr5 153501526 153501908 -46128242 + AluSx SINE Alu 3 378 0 1816 144 28 0 chr5 153501938 153502222 -46127928 + AluJb SINE Alu 1 292 -20 21 0 0 0 chr5 153502398 153502419 -46127731 + AT_rich Low_complexity Low_complexity 1 21 0 731 178 151 20 chr5 153503622 153503774 -46126376 + MER5B DNA MER1_type 6 177 -1 249 252 48 39 chr5 153504517 153504620 -46125530 - MER5A DNA MER1_type -59 130 27 512 312 63 16 chr5 153504785 153504974 -46125176 - MIR SINE MIR -12 250 53 456 127 0 2 chr5 153504982 153505067 -46125083 + L1MB7 LINE L1 4959 5043 -1103 2069 77 45 3 chr5 153505067 153505353 -46124797 + AluSg SINE Alu 1 298 -12 1441 157 26 46 chr5 153505353 153505654 -46124496 + L1MB7 LINE L1 5886 6180 -4 456 127 0 2 chr5 153505654 153505665 -46124485 + L1MB7 LINE L1 5041 5050 -1096 653 158 5 186 chr5 153505866 153505953 -46124197 + MER45A DNA AcHobo 1 29 -1552 1271 124 0 16 chr5 153505953 153506147 -46124003 + L1PB1 LINE L1 5958 6148 -3 653 158 5 186 chr5 153506147 153506274 -46123876 + MER45A DNA AcHobo 29 177 -1 401 248 37 9 chr5 153506927 153507036 -46123114 - MIR SINE MIR -41 221 110 26 0 0 0 chr5 153507086 153507112 -46123038 + AT_rich Low_complexity Low_complexity 1 26 0 1946 126 0 20 chr5 153507170 153507471 -46122679 - AluSx SINE Alu -15 297 3 1867 84 29 61 chr5 153507482 153507792 -46122358 - L1PA13 LINE L1 0 6163 5864 2042 106 0 50 chr5 153508545 153508866 -46121284 + AluSx SINE Alu 1 305 -7 492 259 67 47 chr5 153508912 153509167 -46120983 - MIR SINE MIR 0 262 3 220 204 0 0 chr5 153509828 153509872 -46120278 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 590 89 22 0 chr5 153510141 153510231 -46119919 - MER53 DNA DNA -97 92 1 203 333 0 0 chr5 153511088 153511145 -46119005 + MER5B DNA MER1_type 122 178 0 183 42 0 0 chr5 153512242 153512266 -46117884 + (CA)n Simple_repeat Simple_repeat 2 25 0 300 244 252 0 chr5 153512701 153512824 -46117326 + MIR SINE MIR 81 234 -28 296 271 258 7 chr5 153513503 153513658 -46116492 - MIR SINE MIR 0 262 69 790 284 9 28 chr5 153514612 153514830 -46115320 - MIR SINE MIR -35 227 14 684 231 26 42 chr5 153518638 153518850 -46111300 + MIR SINE MIR 52 260 -2 602 295 108 21 chr5 153518831 153519072 -46111078 + MIR SINE MIR 1 262 0 * 485 268 49 78 chr5 153519251 153519456 -46110694 + MIR SINE MIR 28 226 -36 204 333 24 48 chr5 153519752 153519836 -46110314 - L2 LINE L2 0 3313 3232 353 256 235 0 chr5 153519946 153520085 -46110065 + MIR SINE MIR 37 200 -62 436 228 20 114 chr5 153520113 153520331 -46109819 - MIR SINE MIR -61 201 5 332 288 36 67 chr5 153520678 153520866 -46109284 - MIR SINE MIR -54 154 20 241 217 17 33 chr5 153521055 153521115 -46109035 + L2 LINE L2 3214 3272 0 198 240 190 30 chr5 153521302 153521402 -46108748 + L2 LINE L2 3156 3271 -1 291 247 52 13 chr5 153522394 153522471 -46107679 - MIR3 SINE MIR -17 191 112 * 449 284 42 18 chr5 153522454 153522649 -46107501 + MIR SINE MIR 44 243 -19 378 261 0 23 chr5 153522672 153522760 -46107390 - MIR SINE MIR -100 108 23 539 323 47 24 chr5 153522805 153523059 -46107091 + MIR SINE MIR 3 262 0 267 333 0 11 chr5 153523378 153523465 -46106685 - L2 LINE L2 -19 3294 3209 192 283 22 0 chr5 153523505 153523551 -46106599 - L2 LINE L2 -20 3252 3206 586 206 8 16 chr5 153523597 153523723 -46106427 - MIR SINE MIR -19 243 119 1706 108 3 72 chr5 153524224 153524530 -46105620 - AluJb SINE Alu -17 295 11 629 272 52 24 chr5 153524602 153524815 -46105335 - MIR SINE MIR -31 231 13 612 256 173 5 chr5 153525157 153525348 -46104802 - MIR SINE MIR -8 254 32 778 205 20 0 chr5 153525356 153525507 -46104643 - MER3 DNA MER1_type 0 209 56 557 237 53 30 chr5 153525786 153525955 -46104195 - MIR SINE MIR -62 200 28 265 240 192 10 chr5 153526192 153526296 -46103854 - L2 LINE L2 0 3272 3150 318 235 87 35 chr5 153526375 153526490 -46103660 - L1ME4a LINE L1 -40 6081 5961 27 0 0 0 chr5 153526552 153526579 -46103571 + AT_rich Low_complexity Low_complexity 1 27 0 476 298 120 21 chr5 153527007 153527198 -46102952 + MIR SINE MIR 25 234 -28 180 77 0 0 chr5 153528055 153528081 -46102069 + (CAG)n Simple_repeat Simple_repeat 2 27 0 774 249 67 9 chr5 153528738 153528963 -46101187 - MIR SINE MIR -9 253 16 238 103 103 0 chr5 153529576 153529615 -46100535 - MIR SINE MIR -103 159 117 219 290 14 29 chr5 153529775 153529844 -46100306 + L2 LINE L2 3205 3272 0 295 324 66 5 chr5 153530335 153530465 -46099685 - MIR3 SINE MIR -46 162 22 228 67 0 0 chr5 153531485 153531515 -46098635 + (TG)n Simple_repeat Simple_repeat 2 31 0 231 203 62 62 chr5 153531567 153531631 -46098519 - L2 LINE L2 -2 3311 3248 201 333 86 0 chr5 153531656 153531737 -46098413 - L2 LINE L2 0 3272 3185 596 186 25 8 chr5 153532471 153532589 -46097561 + MER103 DNA DNA 45 164 -2 206 300 89 0 chr5 153532667 153532757 -46097393 - L2 LINE L2 -31 3282 3185 189 305 53 21 chr5 153533503 153533598 -46096552 + MIR SINE MIR 23 120 -88 222 299 65 13 chr5 153533675 153533770 -46096380 - MIR SINE MIR -61 147 43 269 214 71 54 chr5 153534057 153534169 -46095981 + MER113 DNA MER1_type? 1 114 -407 30 59 0 0 chr5 153534232 153534283 -46095867 + AT_rich Low_complexity Low_complexity 1 51 0 564 246 131 13 chr5 153535157 153535346 -46094804 - MIR SINE MIR -6 256 45 2247 89 0 3 chr5 153535346 153535648 -46094502 + AluSq SINE Alu 1 301 -12 2290 66 7 10 chr5 153535678 153535979 -46094171 - AluY SINE Alu -7 304 5 1898 102 11 14 chr5 153536738 153537046 -46093104 + AluSg SINE Alu 1 307 0 848 225 23 0 chr5 153537156 153537329 -46092821 + MIR SINE MIR 37 213 -49 272 252 117 19 chr5 153537354 153537457 -46092693 + L2 LINE L2 1686 1798 -1516 331 236 213 8 chr5 153538062 153538189 -46091961 - MER103 DNA DNA -7 159 7 301 165 25 184 chr5 153538369 153538527 -46091623 - MIR SINE MIR -7 255 123 767 164 25 0 chr5 153538554 153538676 -46091474 + MER63 DNA MER1_type 1 751 -85 219 192 39 19 chr5 153538722 153538774 -46091376 - MIR SINE MIR -110 98 46 31 44 0 0 chr5 153539295 153539340 -46090810 + AT_rich Low_complexity Low_complexity 1 45 0 269 316 26 0 chr5 153539829 153539905 -46090245 - L2 LINE L2 -44 3228 3151 222 37 0 0 chr5 153540333 153540360 -46089790 + (TA)n Simple_repeat Simple_repeat 1 27 0 2173 114 0 0 chr5 153540360 153540659 -46089491 - AluSx SINE Alu -13 299 1 404 187 0 13 chr5 153541008 153541083 -46089067 + LTR67 LTR ERVL 484 557 0 184 194 28 0 chr5 153541425 153541461 -46088689 + L2 LINE L2 3180 3216 -97 1187 286 91 22 chr5 153541827 153542563 -46087587 + L2 LINE L2 2532 3313 0 631 248 212 9 chr5 153542773 153543114 -46087036 + MLT1J LTR MaLR 1 459 -52 2181 98 0 3 chr5 153543922 153544219 -46085931 + AluSx SINE Alu 1 296 -16 180 225 25 0 chr5 153544423 153544463 -46085687 - L3 LINE CR1 -111 1466 1426 * 242 333 16 0 chr5 153544431 153544494 -46085656 + L2 LINE L2 3158 3221 -51 1143 249 32 8 chr5 153544555 153544804 -46085346 - MIR SINE MIR -6 256 2 236 130 0 65 chr5 153544815 153544861 -46085289 + L2 LINE L2 3269 3311 -2 492 312 7 43 chr5 153545517 153545658 -46084492 + L2 LINE L2 3134 3269 -3 1600 124 32 0 chr5 153545979 153546228 -46083922 + AluSx SINE Alu 1 257 -55 564 338 80 16 chr5 153546265 153546579 -46083571 - L2 LINE L2 -50 3263 2930 304 292 11 0 chr5 153546803 153546892 -46083258 - MIR SINE MIR -119 143 54 263 250 28 14 chr5 153547035 153547107 -46083043 - L2 LINE L2 -9 3304 3232 * 547 306 129 0 chr5 153547101 153547271 -46082879 + MIR SINE MIR 21 212 -50 2225 96 0 10 chr5 153547294 153547606 -46082544 + AluSg SINE Alu 1 309 -1 459 259 9 17 chr5 153547644 153547760 -46082390 + L2 LINE L2 3197 3311 -2 2250 96 0 10 chr5 153548111 153548244 -46081906 + AluSg1 SINE Alu 1 134 -175 2195 92 3 10 chr5 153548244 153548550 -46081600 + AluSg SINE Alu 1 304 -6 2250 96 0 10 chr5 153548550 153548728 -46081422 + AluSg1 SINE Alu 134 309 0 328 340 105 6 chr5 153548957 153549119 -46081031 + MER5B DNA MER1_type 1 178 0 2112 64 50 4 chr5 153550366 153550647 -46079503 + AluSx SINE Alu 10 303 -9 2174 85 14 3 chr5 153550852 153551146 -46079004 - AluSx SINE Alu -15 297 1 583 272 68 16 chr5 153551238 153551429 -46078721 + MIR SINE MIR 13 213 -49 285 250 69 0 chr5 153551464 153551536 -46078614 + MIR SINE MIR 186 262 0 369 306 33 0 chr5 153551621 153551742 -46078408 - L2 LINE L2 -223 3049 2925 1965 107 14 14 chr5 153552841 153553153 -46076997 + AluSg SINE Alu 1 312 0 182 387 67 0 chr5 153553155 153553230 -46076920 - L2 LINE L2 -87 3185 3106 769 220 262 21 chr5 153553230 153553650 -46076500 - MLT1H1 LTR MaLR 0 555 37 405 295 82 56 chr5 153553698 153554110 -46076040 - L2 LINE L2 -179 3093 2676 1690 135 76 0 chr5 153554248 153554536 -46075614 - AluSx SINE Alu -2 310 1 2194 81 0 0 chr5 153554661 153554974 -46075176 - AluSp SINE Alu 0 313 1 269 204 21 65 chr5 153555104 153555197 -46074953 - HAL1 LINE L1 -35 2472 2384 452 244 32 103 chr5 153555209 153555377 -46074773 + MIR SINE MIR 18 172 -63 296 369 88 23 chr5 153555579 153556013 -46074137 + L2 LINE L2 1533 1994 -1320 552 212 291 35 chr5 153556641 153556844 -46073306 + MIR SINE MIR 8 262 0 562 254 90 30 chr5 153557606 153557807 -46072343 + MIR SINE MIR 2 214 -48 385 361 59 12 chr5 153557862 153558031 -46072119 + L2 LINE L2 3089 3265 -7 558 325 85 27 chr5 153558104 153558627 -46071523 - L2 LINE L2 -6 3307 2755 * 753 269 75 4 chr5 153558620 153558847 -46071303 - MIR SINE MIR -1 261 19 231 286 26 0 chr5 153559827 153559904 -46070246 + HsTC2 DNA Tc2 1 79 -1819 590 224 68 14 chr5 153559975 153560122 -46070028 + MIR SINE MIR 12 166 -96 333 196 175 41 chr5 153560132 153560229 -46069921 - MIR SINE MIR -65 143 34 2026 132 0 7 chr5 153560525 153560828 -46069322 + AluSx SINE Alu 1 301 -11 2002 130 3 0 chr5 153561444 153561752 -46068398 + AluSq SINE Alu 1 309 -4 318 217 33 54 chr5 153561755 153561847 -46068303 + MIR SINE MIR 156 245 -17 803 186 0 35 chr5 153561878 153562050 -46068100 - FRAM SINE Alu 0 166 1 302 274 0 14 chr5 153562156 153562229 -46067921 - L1MCa LINE L1 -4349 2077 2006 288 0 0 0 chr5 153562229 153562261 -46067889 + (CA)n Simple_repeat Simple_repeat 1 32 0 1957 103 14 17 chr5 153562270 153562560 -46067590 - AluSx SINE Alu -23 289 1 2142 93 7 7 chr5 153563386 153563687 -46066463 + AluSx SINE Alu 1 301 -11 1336 149 141 11 chr5 153563733 153564009 -46066141 - AluSx SINE Alu 0 312 1 270 340 43 11 chr5 153564012 153564106 -46066044 - L2 LINE L2 -44 3228 3132 559 275 7 14 chr5 153564190 153564332 -46065818 + MER5A DNA MER1_type 1 141 -48 5355 160 21 22 chr5 153564334 153565185 -46064965 - L1MB5 LINE L1 -6 6168 5317 1746 134 17 14 chr5 153565185 153565475 -46064675 + AluJb SINE Alu 1 291 -21 5355 160 21 22 chr5 153565475 153565702 -46064448 - L1MB5 LINE L1 -857 5317 5090 2072 110 7 3 chr5 153565702 153566010 -46064140 + AluSq SINE Alu 1 309 -4 5355 160 21 22 chr5 153566010 153566123 -46064027 - L1MB5 LINE L1 -1084 5090 4978 442 77 15 15 chr5 153566129 153566194 -46063956 + MLT1E1 LTR MaLR 441 654 0 887 281 19 48 chr5 153566194 153566504 -46063646 + HERVL LTR ERVL 3069 3369 -2285 801 201 50 25 chr5 153566506 153566665 -46063485 - MER21B LTR ERV1 -372 491 329 265 157 0 20 chr5 153566670 153566721 -46063429 - L1MB5 LINE L1 -1154 4992 4943 455 135 10 29 chr5 153566722 153566826 -46063324 + CT-rich Low_complexity Low_complexity 1 102 0 1708 180 0 15 chr5 153566827 153567160 -46062990 - L1MB5 LINE L1 -1199 4947 4620 195 240 0 40 chr5 153567161 153567211 -46062939 + MER5A DNA MER1_type 97 144 -45 3726 151 72 6 chr5 153567218 153567852 -46062298 - L1MB2 LINE L1 -3 6168 5481 2166 102 3 0 chr5 153567852 153568147 -46062003 - AluSx SINE Alu -16 296 1 3726 151 72 6 chr5 153568147 153568215 -46061935 - L1MB2 LINE L1 -690 5481 5419 797 151 7 40 chr5 153568226 153568378 -46061772 - L1MD3 LINE L1 0 7995 7849 1734 158 3 7 chr5 153568438 153568736 -46061414 - AluJb SINE Alu -15 297 1 359 331 108 12 chr5 153568761 153568927 -46061223 - L2 LINE L2 -193 3079 2898 742 242 75 13 chr5 153568950 153569177 -46060973 - MIR SINE MIR -13 249 9 329 292 150 17 chr5 153569401 153569497 -46060653 + L2 LINE L2 3136 3252 -20 2181 103 0 6 chr5 153569497 153569809 -46060341 - AluSx SINE Alu -2 310 1 329 292 150 17 chr5 153569809 153569832 -46060318 + L2 LINE L2 3252 3271 -1 1538 158 7 33 chr5 153569974 153570277 -46059873 + AluJb SINE Alu 2 296 -16 230 281 16 0 chr5 153570995 153571059 -46059091 + (CA)n Simple_repeat Simple_repeat 2 66 0 229 287 0 11 chr5 153571434 153571521 -46058629 + (CA)n Simple_repeat Simple_repeat 1 86 0 456 305 95 43 chr5 153571717 153572042 -46058108 + L2 LINE L2 2952 3293 -20 2325 71 3 0 chr5 153572050 153572344 -46057806 + AluSp SINE Alu 1 295 -18 1982 135 7 0 chr5 153572544 153572840 -46057310 + AluSx SINE Alu 1 298 -14 598 245 141 32 chr5 153573095 153573281 -46056869 - MIR SINE MIR -6 256 51 2189 83 7 0 chr5 153573982 153574272 -46055878 + AluSp SINE Alu 10 301 -12 379 188 0 62 chr5 153574770 153574866 -46055284 + LTR33A LTR ERVL 421 510 -13 1341 190 31 116 chr5 153574933 153575361 -46054789 - MER39 LTR ERV1 0 682 320 2232 87 0 26 chr5 153575361 153575672 -46054478 - AluSx SINE Alu -9 303 1 1341 190 31 116 chr5 153575672 153575730 -46054420 - MER39 LTR ERV1 -362 320 259 284 232 84 42 chr5 153575705 153575800 -46054350 - LTR48B LTR ERV1 -545 99 1 * 1302 183 32 39 chr5 153575856 153576476 -46053674 - LTR48B-int LTR ERV1 -148 6183 4333 2340 61 0 3 chr5 153576477 153576771 -46053379 + AluY SINE Alu 1 293 -18 212 0 0 35 chr5 153577852 153577881 -46052269 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 8275 185 65 103 chr5 153577883 153578228 -46051922 - LTR48B-int LTR ERV1 -603 4333 3976 2100 61 61 0 chr5 153578228 153578506 -46051644 - AluSq SINE Alu -18 295 1 8275 185 65 103 chr5 153578506 153579421 -46050729 - LTR48B-int LTR ERV1 -960 3976 3027 2333 71 0 0 chr5 153579421 153579715 -46050435 - AluY SINE Alu -17 294 1 8275 185 65 103 chr5 153579715 153579942 -46050208 - LTR48B-int LTR ERV1 -1909 3027 2793 2356 60 0 0 chr5 153579942 153580240 -46049910 + AluY SINE Alu 13 310 -1 8275 185 65 103 chr5 153580240 153580706 -46049444 - LTR48B-int LTR ERV1 -2143 2793 2311 2155 110 13 0 chr5 153580706 153581015 -46049135 - AluSp SINE Alu 0 313 1 8275 185 65 103 chr5 153581015 153581207 -46048943 - LTR48B-int LTR ERV1 -2625 2311 2113 2091 111 0 3 chr5 153581207 153581504 -46048646 + AluSg SINE Alu 1 296 -14 8275 185 65 103 chr5 153581504 153582485 -46047665 - LTR48B-int LTR ERV1 -2823 2113 1324 2099 113 13 3 chr5 153582486 153582796 -46047354 + AluSq SINE Alu 1 313 0 518 108 12 0 chr5 153582797 153582880 -46047270 + (GGAA)n Simple_repeat Simple_repeat 2 85 0 1346 192 96 68 chr5 153582880 153582930 -46047220 - LTR48B-int LTR ERV1 -3598 1338 1291 547 181 0 142 chr5 153582930 153583085 -46047065 - FLAM_A SINE Alu 0 133 1 1346 192 96 68 chr5 153583085 153583290 -46046860 - LTR48B-int LTR ERV1 -3645 1291 1093 2419 65 0 0 chr5 153583290 153583584 -46046566 - AluSc SINE Alu -15 294 1 1346 192 96 68 chr5 153583584 153583765 -46046385 - LTR48B-int LTR ERV1 -3843 1093 889 876 208 121 48 chr5 153583946 153584449 -46045701 - LTR48B-int LTR ERV1 -4061 875 292 2012 101 0 14 chr5 153584465 153584783 -46045367 + AluY SINE Alu 1 314 0 2076 129 0 0 chr5 153584803 153585098 -46045052 + AluSx SINE Alu 1 295 -17 198 0 0 0 chr5 153585098 153585120 -46045030 + (TA)n Simple_repeat Simple_repeat 2 23 0 2157 80 0 58 chr5 153585133 153585460 -46044690 - AluY SINE Alu -3 308 1 225 0 0 0 chr5 153585498 153585523 -46044627 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2224 81 0 0 chr5 153585526 153585811 -46044339 - AluY SINE Alu -26 285 1 319 53 0 4 chr5 153585835 153586041 -46044109 + AluY SINE Alu 17 298 -3 22 35 0 0 chr5 153586041 153586070 -46044080 + AT_rich Low_complexity Low_complexity 1 29 0 675 224 13 99 chr5 153586086 153586142 -46044008 - LTR49-int LTR ERV1 -4797 1534 1475 2072 135 0 0 chr5 153586142 153586453 -46043697 - AluSx SINE Alu -1 311 1 675 224 13 99 chr5 153586453 153586764 -46043386 - LTR49-int LTR ERV1 -4856 1475 1139 2166 108 0 22 chr5 153586764 153587080 -46043070 + AluSx SINE Alu 1 309 -3 675 224 13 99 chr5 153587080 153587116 -46043034 - LTR49-int LTR ERV1 -5192 1139 571 2314 84 0 3 chr5 153587125 153587434 -46042716 - AluSg SINE Alu -2 308 1 777 216 42 89 chr5 153587448 153587707 -46042443 - MER39 LTR ERV1 -192 515 269 232 250 48 48 chr5 153587690 153587774 -46042376 - LTR48B LTR ERV1 -555 89 6 * 442 171 0 0 chr5 153587892 153587974 -46042176 + L1MA10 LINE L1 6253 6334 0 216 97 0 0 chr5 153588159 153588190 -46041960 + (CA)n Simple_repeat Simple_repeat 2 32 0 185 288 0 45 chr5 153588488 153588554 -46041596 + L2 LINE L2 3235 3297 -16 862 269 27 27 chr5 153588618 153588874 -46041276 - MIR SINE MIR 0 262 7 2053 113 6 3 chr5 153588885 153589196 -46040954 + AluSx SINE Alu 1 312 0 2217 122 0 6 chr5 153593468 153593779 -46036371 + AluSx SINE Alu 1 309 -3 1466 156 0 0 chr5 153594592 153594817 -46035333 - AluJb SINE Alu -2 310 86 2545 78 3 0 chr5 153597030 153597337 -46032813 + AluSq SINE Alu 1 308 -5 2348 103 0 0 chr5 153597679 153597979 -46032171 + AluSx SINE Alu 2 301 -11 556 199 32 64 chr5 153598007 153598163 -46031987 - MER20 DNA MER1_type 0 219 69 1157 137 0 18 chr5 153598165 153598333 -46031817 + AluJb SINE Alu 130 294 -18 21 36 0 0 chr5 153598467 153598495 -46031655 + AT_rich Low_complexity Low_complexity 1 28 0 1935 159 3 22 chr5 153598624 153598984 -46031166 + AluSx SINE Alu 3 356 0 1922 144 28 3 chr5 153599008 153599293 -46030857 + AluJb SINE Alu 1 292 -20 21 0 0 0 chr5 153599469 153599490 -46030660 + AT_rich Low_complexity Low_complexity 1 21 0 693 183 150 26 chr5 153600693 153600846 -46029304 + MER5B DNA MER1_type 6 177 -1 253 252 48 39 chr5 153601589 153601692 -46028458 - MER5A DNA MER1_type -59 130 27 503 312 63 16 chr5 153601857 153602046 -46028104 - MIR SINE MIR -12 250 53 470 133 0 0 chr5 153602056 153602139 -46028011 + L1MB7 LINE L1 4961 5043 -1103 2165 94 44 3 chr5 153602139 153602437 -46027713 + AluSg SINE Alu 1 310 0 1313 157 31 45 chr5 153602437 153602723 -46027427 + L1MB7 LINE L1 5899 6180 -4 596 167 5 174 chr5 153602935 153603022 -46027128 + MER45A DNA AcHobo 1 34 -1547 1275 127 0 15 chr5 153603022 153603219 -46026931 + L1PB1 LINE L1 5958 6151 0 596 167 5 174 chr5 153603219 153603343 -46026807 + MER45A DNA AcHobo 34 177 -1 400 248 37 9 chr5 153603996 153604105 -46026045 - MIR SINE MIR -41 221 110 26 0 0 0 chr5 153604155 153604181 -46025969 + AT_rich Low_complexity Low_complexity 1 26 0 2087 120 3 20 chr5 153604239 153604539 -46025611 - AluSx SINE Alu -15 297 3 1845 87 29 61 chr5 153604550 153604860 -46025290 - L1PA13 LINE L1 0 6163 5864 2211 107 0 41 chr5 153605613 153605931 -46024219 + AluSx SINE Alu 1 305 -7 512 259 67 47 chr5 153605977 153606232 -46023918 - MIR SINE MIR 0 262 3 220 204 0 0 chr5 153606893 153606937 -46023213 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 563 89 22 0 chr5 153607206 153607296 -46022854 - MER53 DNA DNA -97 92 1 202 333 0 0 chr5 153608153 153608210 -46021940 + MER5B DNA MER1_type 122 178 0 195 69 0 0 chr5 153609305 153609334 -46020816 + (CA)n Simple_repeat Simple_repeat 2 30 0 306 244 252 0 chr5 153609763 153609886 -46020264 + MIR SINE MIR 81 234 -28 311 271 258 7 chr5 153610565 153610720 -46019430 - MIR SINE MIR 0 262 69 799 284 9 28 chr5 153611674 153611892 -46018258 - MIR SINE MIR -35 227 14 681 231 26 42 chr5 153615700 153615912 -46014238 + MIR SINE MIR 52 260 -2 599 295 108 21 chr5 153615893 153616134 -46014016 + MIR SINE MIR 1 262 0 * 491 268 49 78 chr5 153616313 153616518 -46013632 + MIR SINE MIR 28 226 -36 206 246 82 123 chr5 153616806 153616928 -46013222 - L2 LINE L2 -1 3271 3155 357 256 235 0 chr5 153617007 153617146 -46013004 + MIR SINE MIR 37 200 -62 437 228 20 114 chr5 153617174 153617392 -46012758 - MIR SINE MIR -61 201 5 334 304 31 62 chr5 153617739 153617927 -46012223 - MIR SINE MIR -54 154 20 240 217 17 33 chr5 153618116 153618176 -46011974 + L2 LINE L2 3214 3272 0 201 240 190 30 chr5 153618363 153618463 -46011687 + L2 LINE L2 3156 3271 -1 292 247 52 13 chr5 153619455 153619532 -46010618 - MIR3 SINE MIR -17 191 112 * 436 296 41 17 chr5 153619515 153619719 -46010431 + MIR SINE MIR 44 252 -10 380 261 0 23 chr5 153619733 153619821 -46010329 - MIR SINE MIR -100 108 23 548 335 39 16 chr5 153619866 153620120 -46010030 + MIR SINE MIR 3 262 0 274 333 0 11 chr5 153620439 153620526 -46009624 - L2 LINE L2 -19 3294 3209 193 283 22 0 chr5 153620566 153620612 -46009538 - L2 LINE L2 -20 3252 3206 591 206 8 16 chr5 153620658 153620784 -46009366 - MIR SINE MIR -19 243 119 289 288 131 33 chr5 153621344 153621497 -46008653 + MIR3 SINE MIR 37 204 -4 213 307 29 51 chr5 153621570 153621707 -46008443 - MIR3 SINE MIR -70 138 5 388 248 159 14 chr5 153623881 153624026 -46006124 + MIR SINE MIR 86 251 -11 2245 132 0 3 chr5 153624591 153624901 -46005249 - AluSx SINE Alu -3 309 1 23 33 0 0 chr5 153627020 153627050 -46003100 + AT_rich Low_complexity Low_complexity 1 30 0 913 189 0 0 chr5 153627132 153627275 -46002875 + AluJo SINE Alu 1 143 -169 2054 103 3 40 chr5 153627277 153627578 -46002572 + AluSc SINE Alu 19 308 -1 21 36 0 0 chr5 153627870 153627898 -46002252 + GC_rich Low_complexity Low_complexity 1 28 0 2812 87 31 91 chr5 153627949 153628596 -46001554 + SVA Other Other 393 868 -597 818 123 0 39 chr5 153630835 153630965 -45999185 - AluJb SINE Alu -103 209 85 1396 132 28 106 chr5 153631651 153631814 -45998336 + L1M3 LINE L1 5268 5387 -796 2450 78 3 0 chr5 153631814 153632108 -45998042 - AluSp SINE Alu -18 295 1 1396 132 28 106 chr5 153632108 153632304 -45997846 + L1M3 LINE L1 5387 5597 -586 824 173 0 8 chr5 153632315 153632448 -45997702 + FLAM_C SINE Alu 2 133 0 1675 194 3 3 chr5 153632453 153632760 -45997390 + AluJb SINE Alu 1 307 0 294 151 0 19 chr5 153632806 153632859 -45997291 - L1MC3 LINE L1 -1717 6068 6017 1890 147 65 3 chr5 153632870 153633223 -45996927 + L1MC3 LINE L1 6079 6453 -1332 802 67 0 0 chr5 153633223 153633328 -45996822 + L1MB2 LINE L1 5773 5877 -294 808 134 67 0 chr5 153633335 153633465 -45996685 + L1MB2 LINE L1 6013 6156 -15 306 0 0 0 chr5 153633465 153633499 -45996651 + (TG)n Simple_repeat Simple_repeat 2 35 0 808 134 67 0 chr5 153633499 153633517 -45996633 + L1MB2 LINE L1 6156 6171 0 2479 91 0 0 chr5 153633525 153633832 -45996318 + AluSc SINE Alu 1 307 -2 2420 34 0 0 chr5 153634119 153634386 -45995764 + AluY SINE Alu 28 294 -17 2186 94 0 0 chr5 153634395 153634662 -45995488 + AluSx SINE Alu 1 267 -45 702 257 78 24 chr5 153634663 153634869 -45995281 - MIR SINE MIR -32 230 14 2098 198 116 36 chr5 153635205 153635706 -45994444 - MLT1F LTR MaLR -1 541 1 565 213 37 0 chr5 153635749 153635857 -45994293 + L2 LINE L2 3201 3312 -1 210 333 12 0 chr5 153636022 153636103 -45994047 + MIR SINE MIR 176 257 -5 2223 109 0 55 chr5 153636119 153636449 -45993701 - AluSx SINE Alu 0 312 1 451 215 31 46 chr5 153636482 153636612 -45993538 + MLT1G1 LTR MaLR 1 128 -467 2191 93 27 7 chr5 153686711 153687011 -45943139 + AluSq SINE Alu 1 306 -7 243 106 0 191 chr5 153687017 153687111 -45943039 + MER5C DNA MER1_type 249 324 0 1452 128 81 21 chr5 153687244 153687479 -45942671 + AluJb SINE Alu 1 249 -63 195 42 0 0 chr5 153687565 153687589 -45942561 + (AATTG)n Simple_repeat Simple_repeat 2 25 0 245 306 13 38 chr5 153687634 153687791 -45942359 + CT-rich Low_complexity Low_complexity 3 155 0 1063 236 4 19 chr5 153688106 153688364 -45941786 + MIR SINE MIR 1 254 -8 2223 84 13 27 chr5 153688364 153688685 -45941465 - AluSx SINE Alu 0 317 1 27 49 0 0 chr5 153688694 153688735 -45941415 + AT_rich Low_complexity Low_complexity 1 41 0 367 227 0 0 chr5 153690244 153690319 -45939831 - L3 LINE CR1 -11 1566 1492 248 205 354 0 chr5 153691053 153691098 -45939052 - L1MA10 LINE L1 -2 6332 6288 2522 192 83 56 chr5 153691098 153691738 -45938412 - L1ME1 LINE L1 -79 6087 5421 2181 121 0 0 chr5 153691738 153692054 -45938096 - AluSq SINE Alu 0 316 1 2522 192 83 56 chr5 153692054 153692162 -45937988 - L1ME1 LINE L1 -745 5421 5317 208 211 0 0 chr5 153692202 153692240 -45937910 + CT-rich Low_complexity Low_complexity 3 40 0 810 234 17 6 chr5 153692252 153692427 -45937723 - AluJb SINE Alu 0 312 136 521 225 92 0 chr5 153692427 153692569 -45937581 - L1ME1 LINE L1 -943 5203 5049 618 128 206 39 chr5 153692569 153692718 -45937432 - AluJo/FRAM SINE Alu -10 302 136 1493 184 6 52 chr5 153692718 153693045 -45937105 - AluJb SINE Alu 0 312 1 401 306 144 41 chr5 153694694 153695034 -45935116 - L2 LINE L2 0 3272 2898 2204 107 0 0 chr5 153695300 153695598 -45934552 + AluSg SINE Alu 1 298 -12 486 248 87 25 chr5 153695615 153695776 -45934374 + MIR SINE MIR 27 197 -65 666 260 62 51 chr5 153695787 153696060 -45934090 - L2 LINE L2 -5 3308 3033 425 136 0 0 chr5 153696073 153696139 -45934011 + Alu SINE Alu 240 305 -7 1921 98 63 11 chr5 153696333 153696449 -45933701 + AluSp SINE Alu 1 109 -204 2350 42 0 3 chr5 153696449 153696759 -45933391 + AluY SINE Alu 1 309 0 1921 98 63 11 chr5 153696759 153696926 -45933224 + AluSp SINE Alu 109 300 -13 232 89 22 22 chr5 153697511 153697556 -45932594 + (GGGAGA)n Simple_repeat Simple_repeat 4 48 0 465 284 110 0 chr5 153698517 153698672 -45931478 + MIR SINE MIR 90 261 -1 468 0 0 0 chr5 153700913 153700965 -45929185 + (CA)n Simple_repeat Simple_repeat 2 53 0 559 283 39 29 chr5 153701293 153701498 -45928652 - MIR SINE MIR 0 262 56 301 228 10 10 chr5 153702205 153702306 -45927844 + CT-rich Low_complexity Low_complexity 2 102 0 299 301 53 38 chr5 153702370 153702503 -45927647 - L2 LINE L2 0 3313 3179 341 22 22 0 chr5 153703050 153703096 -45927054 + (CA)n Simple_repeat Simple_repeat 2 48 0 306 221 177 9 chr5 153703548 153703661 -45926489 - MIR SINE MIR -58 204 73 2370 93 0 0 chr5 153703834 153704146 -45926004 + AluSx SINE Alu 1 312 0 182 182 0 0 chr5 153704718 153704751 -45925399 - L2 LINE L2 -19 3253 3221 * 347 285 129 16 chr5 153704725 153704911 -45925239 - MIR SINE MIR -20 242 36 489 195 234 0 chr5 153705575 153705729 -45924421 - MIR SINE MIR 0 262 73 407 306 21 28 chr5 153705858 153706002 -45924148 - MIR SINE MIR -73 189 47 2349 79 0 3 chr5 153706008 153706311 -45923839 - AluSc SINE Alu -7 302 1 259 382 18 0 chr5 153706413 153706523 -45923627 - L2 LINE L2 0 3313 3202 253 291 128 28 chr5 153706640 153706781 -45923369 - MIR3 SINE MIR -43 165 11 667 299 98 4 chr5 153708318 153708552 -45921598 - MIR SINE MIR 0 262 7 480 214 208 34 chr5 153709405 153709459 -45920691 - MIR SINE MIR -8 254 211 2166 90 28 0 chr5 153709459 153709748 -45920402 - AluSx SINE Alu -15 297 1 480 214 208 34 chr5 153709748 153709871 -45920279 - MIR SINE MIR -51 211 46 517 209 8 8 chr5 153709896 153710030 -45920120 + CT-rich Low_complexity Low_complexity 1 134 0 1941 146 0 37 chr5 153710030 153710351 -45919799 - AluJo SINE Alu -3 309 1 333 268 19 2 chr5 153711263 153711418 -45918732 + MER117 DNA MER1_type 1 190 -7 227 275 125 58 chr5 153711424 153711544 -45918606 - MIR3 SINE MIR -48 160 33 183 220 0 0 chr5 153712230 153712280 -45917870 + CT-rich Low_complexity Low_complexity 2 51 0 1218 271 104 2 chr5 153712569 153712668 -45917482 + MLT1K LTR MaLR 121 209 -379 2259 105 0 0 chr5 153712668 153712973 -45917177 + AluSg SINE Alu 1 305 -5 1218 271 104 2 chr5 153712973 153713287 -45916863 + MLT1K LTR MaLR 209 576 -12 2170 107 0 19 chr5 153713317 153713634 -45916516 + AluSx SINE Alu 1 311 -1 183 114 0 0 chr5 153714046 153714081 -45916069 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 1612 149 0 70 chr5 153714081 153714237 -45915913 - AluJo SINE Alu -31 281 155 2102 120 10 0 chr5 153714237 153714545 -45915605 - AluSx SINE Alu -1 311 1 1612 149 0 70 chr5 153714545 153714690 -45915460 - AluJo SINE Alu -157 155 1 1520 140 129 0 chr5 153714692 153714956 -45915194 - AluSx SINE Alu -3 299 2 600 236 167 5 chr5 153714957 153715173 -45914977 - L1MC/D LINE L1 -1984 5824 5574 775 316 17 4 chr5 153715250 153715484 -45914666 + MIR SINE MIR 20 256 -6 373 323 15 0 chr5 153716397 153716527 -45913623 + MIR SINE MIR 32 163 -99 357 320 86 40 chr5 153717399 153717574 -45912576 - MIR SINE MIR -59 203 21 243 140 0 0 chr5 153718124 153718174 -45911976 + (CA)n Simple_repeat Simple_repeat 2 51 0 204 276 0 0 chr5 153718241 153718299 -45911851 + GA-rich Low_complexity Low_complexity 6 63 0 478 248 68 15 chr5 153719011 153719144 -45911006 + MIR SINE MIR 8 147 -115 221 225 258 25 chr5 153720163 153720283 -45909867 - MIR3 SINE MIR -45 163 16 723 238 61 0 chr5 153720360 153720524 -45909626 - MIR SINE MIR -86 176 3 196 320 33 80 chr5 153721614 153721764 -45908386 + L3 LINE CR1 339 481 -1096 218 119 24 0 chr5 153722367 153722409 -45907741 + T-rich Low_complexity Low_complexity 3 45 0 2340 73 10 0 chr5 153722439 153722741 -45907409 - AluSp SINE Alu -8 305 1 2055 99 0 3 chr5 153722770 153723072 -45907078 + AluSx SINE Alu 1 301 0 236 361 0 0 chr5 153723107 153723204 -45906946 + L2 LINE L2 2924 3020 -252 671 231 73 51 chr5 153723229 153723463 -45906687 + MIR SINE MIR 21 259 -3 761 296 107 14 chr5 153724232 153724587 -45905563 - L2 LINE L2 0 3313 2926 245 368 17 0 chr5 153724729 153724846 -45905304 + L2 LINE L2 2858 2976 -337 1053 68 37 0 chr5 153724865 153725026 -45905124 + (TTTC)n Simple_repeat Simple_repeat 4 170 0 282 56 0 0 chr5 153725026 153725062 -45905088 + (TCCCC)n Simple_repeat Simple_repeat 4 39 0 2067 82 4 0 chr5 153725082 153725350 -45904800 - AluSp SINE Alu -44 269 1 2075 126 3 0 chr5 153725350 153725644 -45904506 - AluSx SINE Alu -17 295 1 1734 160 7 3 chr5 153725857 153726145 -45904005 - AluSx SINE Alu -12 300 12 370 319 84 5 chr5 153726272 153726485 -45903665 + L3 LINE CR1 1235 1464 -113 564 198 97 68 chr5 153727617 153727643 -45902507 + MIR SINE MIR 46 70 -192 850 124 0 23 chr5 153727643 153727772 -45902378 + FLAM_A SINE Alu 1 126 -7 564 198 97 68 chr5 153727772 153727952 -45902198 + MIR SINE MIR 70 258 -4 247 346 110 15 chr5 153727957 153728093 -45902057 - MIR SINE MIR -101 161 13 209 245 57 0 chr5 153729692 153729745 -45900405 - L2 LINE L2 -8 3305 3250 727 256 51 34 chr5 153729782 153730016 -45900134 + MIR SINE MIR 11 248 -14 1750 158 24 3 chr5 153730114 153730405 -45899745 + AluJo SINE Alu 1 297 -15 2218 95 3 13 chr5 153730409 153730724 -45899426 + AluSx SINE Alu 1 312 0 184 298 79 9 chr5 153730748 153730862 -45899288 - L2 LINE L2 -219 3053 2932 189 74 0 0 chr5 153730994 153731021 -45899129 + (TCC)n Simple_repeat Simple_repeat 3 29 0 1385 134 18 9 chr5 153731140 153731357 -45898793 + MER20 DNA MER1_type 1 219 0 254 267 9 67 chr5 153732484 153732589 -45897561 + L2 LINE L2 3174 3272 0 481 225 176 0 chr5 153732665 153732807 -45897343 - MIR SINE MIR -17 245 79 479 272 139 6 chr5 153733203 153733376 -45896774 + MIR SINE MIR 61 256 -6 311 346 6 22 chr5 153734196 153734378 -45895772 + CT-rich Low_complexity Low_complexity 1 179 0 285 331 123 0 chr5 153734665 153734795 -45895355 - L3 LINE CR1 -36 1541 1396 300 376 53 8 chr5 153734833 153735096 -45895054 - L3 LINE CR1 -291 1286 1012 592 250 125 22 chr5 153735174 153735398 -45894752 - MIR SINE MIR 0 262 16 380 244 206 0 chr5 153735629 153735760 -45894390 - MIR SINE MIR -10 252 95 211 197 26 53 chr5 153736471 153736547 -45893603 + CT-rich Low_complexity Low_complexity 1 74 0 224 300 131 15 chr5 153736679 153736809 -45893341 - MER91A DNA MER1_type -29 167 23 448 247 0 0 chr5 153738311 153738404 -45891746 - MIR SINE MIR -63 145 53 498 276 16 57 chr5 153738556 153738748 -45891402 - MIR SINE MIR -66 196 13 243 188 0 0 chr5 153739571 153739619 -45890531 + GA-rich Low_complexity Low_complexity 2 49 0 213 221 151 47 chr5 153739881 153739967 -45890183 + MIR3 SINE MIR 109 203 -5 497 279 43 0 chr5 153740229 153740369 -45889781 + MIR SINE MIR 85 230 -32 699 299 41 41 chr5 153741049 153741218 -45888932 - L2 LINE L2 -3 3310 3139 1988 110 0 40 chr5 153741218 153741551 -45888599 + AluSx SINE Alu 1 312 0 699 299 41 41 chr5 153741551 153741695 -45888455 - L2 LINE L2 -173 3140 2997 1935 104 22 0 chr5 153741701 153741996 -45888154 + AluSx SINE Alu 10 310 0 307 278 112 85 chr5 153742022 153742281 -45887869 - L2 LINE L2 -434 2880 2615 793 209 19 0 chr5 153742343 153742501 -45887649 + MER5B DNA MER1_type 1 161 -17 412 331 22 7 chr5 153742545 153742681 -45887469 - MIR SINE MIR -14 248 111 206 188 203 14 chr5 153742701 153742770 -45887380 + MIR3 SINE MIR 87 168 -40 202 260 52 26 chr5 153743128 153743205 -45886945 - MIR SINE MIR -92 116 38 559 295 0 7 chr5 153743599 153743748 -45886402 + MIR SINE MIR 2 149 -113 314 219 9 95 chr5 153743751 153743856 -45886294 + L1MC4a LINE L1 5816 5911 -1897 461 188 79 0 chr5 153744086 153744187 -45885963 + MIR SINE MIR 137 245 -17 685 285 157 30 chr5 153744562 153744931 -45885219 - L2 LINE L2 -22 3250 2835 2220 110 0 0 chr5 153744947 153745255 -45884895 - AluSx SINE Alu -4 308 1 2009 114 0 29 chr5 153745536 153745843 -45884307 + AluSx SINE Alu 1 298 -14 2328 81 7 0 chr5 153747315 153747613 -45882537 + AluSq SINE Alu 1 300 -13 182 379 103 29 chr5 153748708 153748882 -45881268 - L2 LINE L2 -48 3224 3038 519 274 48 7 chr5 153748982 153749128 -45881022 - MIR SINE MIR -62 200 49 2076 114 0 28 chr5 153749199 153749516 -45880634 - AluSx SINE Alu -4 308 1 308 241 0 35 chr5 153750088 153750175 -45879975 + G-rich Low_complexity Low_complexity 3 86 0 525 216 128 7 chr5 153750208 153750356 -45879794 - MIR SINE MIR -10 252 87 297 241 0 36 chr5 153750369 153750452 -45879698 - L2 LINE L2 0 3313 3234 229 331 30 94 chr5 153750540 153750911 -45879239 - L2 LINE L2 -95 3177 2831 2193 101 3 0 chr5 153751044 153751342 -45878808 - AluSc SINE Alu -10 299 1 1555 272 63 19 chr5 153751395 153752210 -45877940 + L2 LINE L2 2441 3289 -24 343 224 22 27 chr5 153752280 153752402 -45877748 - MIR SINE MIR -43 219 101 1760 167 7 13 chr5 153752417 153752722 -45877428 + AluJo SINE Alu 3 305 -7 848 235 51 17 chr5 153752752 153752986 -45877164 + MIR SINE MIR 21 262 0 547 277 82 33 chr5 153753801 153753985 -45876165 + MIR SINE MIR 70 262 0 258 345 50 7 chr5 153754226 153754365 -45875785 - L2 LINE L2 -214 3058 2914 356 319 31 12 chr5 153754397 153754560 -45875590 - L2 LINE L2 -518 2796 2631 187 167 0 37 chr5 153755134 153755188 -45874962 + GA-rich Low_complexity Low_complexity 3 54 0 203 256 0 0 chr5 153755458 153755501 -45874649 + (TG)n Simple_repeat Simple_repeat 2 44 0 298 277 119 117 chr5 153755807 153756150 -45874000 + L2 LINE L2 2924 3267 -5 874 167 0 0 chr5 153756238 153756370 -45873780 - FLAM_A SINE Alu 0 133 2 346 274 20 0 chr5 153756386 153756488 -45873662 - MIR SINE MIR -85 123 20 483 294 40 40 chr5 153757127 153757304 -45872846 + MIR SINE MIR 79 255 -7 355 341 69 23 chr5 153757318 153757491 -45872659 + MIR SINE MIR 4 184 -78 497 303 112 0 chr5 153757903 153758081 -45872069 - MIR SINE MIR -44 218 21 326 220 279 8 chr5 153758669 153758789 -45871361 + MIR SINE MIR 16 165 -52 355 242 74 47 chr5 153759044 153759193 -45870957 - MIR3 SINE MIR -15 193 41 272 210 0 65 chr5 153759283 153759345 -45870805 + L2 LINE L2 3238 3295 -18 270 0 0 0 chr5 153759367 153759397 -45870753 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 363 301 117 10 chr5 153760036 153760231 -45869919 + MIR SINE MIR 46 262 0 596 303 62 25 chr5 153760967 153761208 -45868942 + MIR SINE MIR 12 261 -1 721 213 0 0 chr5 153761470 153761606 -45868544 + L2 LINE L2 3137 3272 0 899 203 68 0 chr5 153762354 153762531 -45867619 + MER5A DNA MER1_type 1 189 0 207 0 0 0 chr5 153763184 153763207 -45866943 + (GGGGA)n Simple_repeat Simple_repeat 1 23 0 201 276 23 35 chr5 153763318 153763405 -45866745 + GA-rich Low_complexity Low_complexity 2 87 0 597 327 29 10 chr5 153764304 153764512 -45865638 + MIR SINE MIR 28 239 -23 561 296 130 27 chr5 153764517 153764818 -45865332 - L2 LINE L2 -20 3293 2962 354 282 28 41 chr5 153765470 153765622 -45864528 - MIR SINE MIR -62 146 6 511 233 25 74 chr5 153765729 153765813 -45864337 + MER117 DNA MER1_type 42 116 -81 1194 185 0 0 chr5 153765813 153766002 -45864148 - MER5A DNA MER1_type 0 189 1 511 233 25 74 chr5 153766002 153766080 -45864070 + MER117 DNA MER1_type 116 196 -1 22 70 0 0 chr5 153766108 153766151 -45863999 + AT_rich Low_complexity Low_complexity 1 43 0 561 322 127 36 chr5 153766155 153766730 -45863420 + L2 LINE L2 2682 3307 -6 208 194 0 0 chr5 153766820 153766856 -45863294 - L2 LINE L2 -11 3302 3267 298 255 153 0 chr5 153766978 153767076 -45863074 - MIR SINE MIR -54 208 96 639 186 86 59 chr5 153767244 153767416 -45862734 - L2 LINE L2 -57 3256 3075 1677 138 20 34 chr5 153767416 153767712 -45862438 - AluJo SINE Alu -20 292 1 639 186 86 59 chr5 153767712 153767760 -45862390 - L2 LINE L2 -238 3075 3030 1604 97 20 48 chr5 153767760 153768008 -45862142 - MER1B DNA MER1_type 0 339 99 234 111 0 0 chr5 153768004 153768040 -45862110 - MER1B DNA MER1_type -301 36 1 * 554 254 86 55 chr5 153768040 153768088 -45862062 - L2 LINE L2 -276 3037 2992 1304 135 60 34 chr5 153768088 153768224 -45861926 - ORSL DNA AcHobo 0 275 144 2067 125 13 3 chr5 153768224 153768529 -45861621 - AluSx SINE Alu -4 308 1 1304 135 60 34 chr5 153768529 153768659 -45861491 - ORSL DNA AcHobo -131 144 2 554 254 86 55 chr5 153768659 153768871 -45861279 - L2 LINE L2 -321 2992 2782 231 274 0 71 chr5 153769891 153769975 -45860175 + MIR SINE MIR 84 162 -46 220 292 117 0 chr5 153769985 153770105 -45860045 + MIR SINE MIR 114 247 -15 367 282 18 18 chr5 153771427 153771597 -45858553 + (CAGAGA)n Simple_repeat Simple_repeat 4 173 0 226 316 132 20 chr5 153772042 153772194 -45857956 - MIR SINE MIR -2 260 92 752 256 15 5 chr5 153773152 153773351 -45856799 - MIR SINE MIR -60 202 2 1960 181 67 3 chr5 153773385 153773727 -45856423 + MLT1A1 LTR MaLR 2 365 0 711 262 3 113 chr5 153776051 153776333 -45853817 + MIR SINE MIR 2 252 -10 224 128 0 21 chr5 153776535 153776582 -45853568 + (TTCA)n Simple_repeat Simple_repeat 2 47 0 593 286 133 57 chr5 153776582 153776914 -45853236 - L2 LINE L2 0 3272 2916 476 273 139 0 chr5 153777241 153777413 -45852737 - MIR SINE MIR -65 197 2 519 222 16 8 chr5 153777907 153778033 -45852117 + MIR SINE MIR 22 148 -60 * 616 237 129 5 chr5 153778031 153778248 -45851902 + MIR SINE MIR 21 262 0 289 363 42 8 chr5 153778438 153778617 -45851533 - MER5B DNA MER1_type 0 178 5 848 288 17 4 chr5 153778873 153779106 -45851044 - MIR SINE MIR -8 254 19 293 293 170 0 chr5 153780146 153780293 -45849857 - MIR3 SINE MIR -4 204 33 647 225 160 19 chr5 153780449 153780662 -45849488 - MIR SINE MIR -18 244 2 414 0 0 0 chr5 153781982 153782028 -45848122 + (CA)n Simple_repeat Simple_repeat 2 47 0 286 246 29 0 chr5 153782296 153782365 -45847785 + L2 LINE L2 3233 3303 -10 219 114 0 0 chr5 153782366 153782401 -45847749 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 238 222 0 121 chr5 153783596 153783652 -45846498 - MIR SINE MIR 0 262 221 2191 98 3 0 chr5 153783652 153783948 -45846202 - AluSp SINE Alu -16 297 1 238 222 0 121 chr5 153783948 153783990 -45846160 - MIR SINE MIR -41 221 176 672 237 62 49 chr5 153784015 153784201 -45845949 + MIR SINE MIR 7 198 -64 1461 134 137 39 chr5 153784201 153784485 -45845665 + AluJb SINE Alu 1 312 0 672 237 62 49 chr5 153784485 153784522 -45845628 + MIR SINE MIR 198 233 -29 297 225 119 20 chr5 153784545 153784663 -45845487 - MIR SINE MIR -62 146 29 549 279 73 0 chr5 153786385 153786564 -45843586 - MIR SINE MIR -21 241 50 206 277 10 30 chr5 153786862 153786963 -45843187 + G-rich Low_complexity Low_complexity 3 101 0 410 299 0 56 chr5 153787664 153787808 -45842342 - MIR3 SINE MIR -13 195 60 184 330 91 0 chr5 153787896 153787984 -45842166 + MIR SINE MIR 99 194 -68 262 264 111 0 chr5 153788374 153788446 -45841704 + L2 LINE L2 3158 3237 -35 287 237 144 0 chr5 153791353 153791450 -45838700 - MIR SINE MIR -16 246 136 237 264 190 0 chr5 153791464 153791706 -45838444 - L1ME4a LINE L1 -4 6117 5830 260 334 90 12 chr5 153791797 153792265 -45837885 - L1MC5 LINE L1 -427 7534 7200 314 318 18 9 chr5 153792268 153792378 -45837772 - MIR SINE MIR -61 147 37 679 281 65 26 chr5 153792562 153792793 -45837357 - MIR SINE MIR -6 256 17 184 330 22 22 chr5 153793128 153793219 -45836931 - MIR SINE MIR -55 207 117 290 258 0 0 chr5 153793577 153793639 -45836511 - MIR3 SINE MIR -31 177 116 244 224 0 0 chr5 153794420 153794469 -45835681 + L2 LINE L2 3265 3313 0 379 348 15 22 chr5 153794534 153794669 -45835481 + L2 LINE L2 3134 3267 -5 287 211 70 0 chr5 153795339 153795396 -45834754 - L2 LINE L2 -7 3306 3246 248 289 0 0 chr5 153796221 153796273 -45833877 + polypyrimidine Low_complexity Low_complexity 1 52 0 541 298 76 64 chr5 153796752 153797464 -45832686 + L2 LINE L2 2584 3313 0 434 296 100 62 chr5 153797488 153797877 -45832273 - L2 LINE L2 -24 3248 2845 405 0 0 0 chr5 153798459 153798504 -45831646 + (TG)n Simple_repeat Simple_repeat 2 46 0 471 18 0 0 chr5 153798586 153798642 -45831508 + (CA)n Simple_repeat Simple_repeat 2 57 0 212 204 140 75 chr5 153798716 153798809 -45831341 - MER5A DNA MER1_type -1 188 90 396 322 126 22 chr5 153799009 153799192 -45830958 - L2 LINE L2 -3 3310 3109 333 349 7 11 chr5 153799305 153799484 -45830666 + CT-rich Low_complexity Low_complexity 1 178 0 503 283 60 0 chr5 153800455 153800621 -45829529 - MIR SINE MIR -6 256 81 223 167 17 33 chr5 153801089 153801149 -45829001 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 203 170 21 0 chr5 153801576 153801623 -45828527 + GA-rich Low_complexity Low_complexity 2 49 0 180 286 0 0 chr5 153802823 153802872 -45827278 + L2 LINE L2 3224 3272 0 362 320 66 28 chr5 153803054 153803254 -45826896 - MIR SINE MIR -50 212 8 247 240 84 53 chr5 153803308 153803435 -45826715 - MIR SINE MIR -79 183 45 2499 80 0 3 chr5 153803435 153803747 -45826403 - AluY SINE Alu 0 311 1 2333 104 7 0 chr5 153803797 153804094 -45826056 - AluSq SINE Alu -14 299 1 348 310 236 10 chr5 153804113 153804241 -45825909 - MIR SINE MIR -10 252 154 1666 199 30 7 chr5 153804241 153804360 -45825790 + AluJb SINE Alu 3 118 -194 199 71 48 0 chr5 153804360 153804402 -45825748 + A-rich Low_complexity Low_complexity 2 45 0 1666 199 30 7 chr5 153804402 153804583 -45825567 + AluJb SINE Alu 118 310 -2 348 310 236 10 chr5 153804583 153804657 -45825493 - MIR SINE MIR -108 154 4 2204 86 4 11 chr5 153804864 153805177 -45824973 + AluSc SINE Alu 1 311 0 491 277 60 36 chr5 153805185 153805351 -45824799 - MIR SINE MIR -13 249 80 1132 276 114 17 chr5 153806513 153807053 -45823097 - L2 LINE L2 -2 3311 2700 243 368 11 0 chr5 153807070 153807157 -45822993 + MIR SINE MIR 45 132 -76 1192 189 55 60 chr5 153810042 153810571 -45819579 - MLT1C LTR MaLR 0 488 1 463 288 82 62 chr5 153810575 153810832 -45819318 + L2 LINE L2 3010 3271 -1 229 329 11 98 chr5 153811088 153811365 -45818785 - L2 LINE L2 -96 3176 2924 586 191 93 19 chr5 153812012 153812174 -45817976 + MIR SINE MIR 18 191 -71 674 234 93 28 chr5 153814419 153814633 -45815517 + MIR SINE MIR 31 258 -4 338 171 0 13 chr5 153814768 153814844 -45815306 + GA-rich Low_complexity Low_complexity 4 78 0 241 289 41 31 chr5 153815170 153815267 -45814883 - L3b LINE CR1 -149 1434 1337 657 119 164 8 chr5 153816045 153816179 -45813971 + MLT1A1 LTR MaLR 1 155 -210 897 109 0 73 chr5 153816181 153816293 -45813857 + FLAM_C SINE Alu 1 120 -192 2753 106 9 41 chr5 153816293 153816683 -45813467 + MSTA LTR MaLR 1 377 -51 1850 100 0 63 chr5 153816683 153816954 -45813196 + AluSq SINE Alu 60 313 0 2753 106 9 41 chr5 153816954 153817005 -45813145 + MSTA LTR MaLR 377 428 0 8925 144 29 52 chr5 153817005 153817063 -45813087 + MSTA-int LTR MaLR 1 59 -1592 1906 140 18 0 chr5 153817063 153817335 -45812815 + AluSx SINE Alu 21 297 -15 8925 144 29 52 chr5 153817335 153817639 -45812511 + MSTA-int LTR MaLR 59 368 -1283 1749 192 3 0 chr5 153817639 153817925 -45812225 + AluJb SINE Alu 1 287 -25 8925 144 29 52 chr5 153817925 153817983 -45812167 + MSTA-int LTR MaLR 368 426 -1225 2333 108 16 0 chr5 153817983 153818290 -45811860 - AluSp SINE Alu -1 312 1 8925 144 29 52 chr5 153818290 153818547 -45811603 + MSTA-int LTR MaLR 426 687 -964 366 42 0 0 chr5 153818547 153818595 -45811555 + (CA)n Simple_repeat Simple_repeat 1 48 0 8925 144 29 52 chr5 153818595 153819604 -45810546 + MSTA-int LTR MaLR 687 1651 0 2759 116 12 0 chr5 153819606 153820027 -45810123 + MSTA LTR MaLR 3 428 0 897 109 0 73 chr5 153820027 153820047 -45810103 + FLAM_C SINE Alu 120 127 -185 1375 158 5 5 chr5 153820067 153820289 -45809861 + MLT1A1 LTR MaLR 144 365 0 490 288 26 64 chr5 153820586 153820816 -45809334 + MLT1K LTR MaLR 3 223 -365 546 301 90 64 chr5 153820816 153821251 -45808899 - MLT1J2 LTR MaLR 0 450 1 * 567 264 83 63 chr5 153821251 153821485 -45808665 + MLT1K LTR MaLR 347 585 -3 2083 145 0 7 chr5 153821592 153821895 -45808255 + AluSx SINE Alu 1 301 -11 1007 172 17 17 chr5 153821895 153822069 -45808081 + AluSg/x SINE Alu 134 307 -5 246 175 0 0 chr5 153822327 153822367 -45807783 + MLT1I LTR MaLR 100 139 -270 742 256 18 6 chr5 153822383 153822551 -45807599 + MLT1I LTR MaLR 240 409 0 2476 67 0 3 chr5 153822655 153822955 -45807195 - AluY SINE Alu -12 299 1 209 241 0 0 chr5 153823433 153823487 -45806663 - MIR SINE MIR -111 151 98 282 207 14 50 chr5 153823683 153823823 -45806327 + (TGGA)n Simple_repeat Simple_repeat 1 135 0 440 306 128 0 chr5 153824011 153824191 -45805959 + MIR SINE MIR 58 260 -2 929 226 13 25 chr5 153824917 153825152 -45804998 + MIR SINE MIR 31 262 0 329 258 0 0 chr5 153825152 153825241 -45804909 + (TTCA)n Simple_repeat Simple_repeat 1 89 0 259 307 21 79 chr5 153825404 153825544 -45804606 + L2 LINE L2 2932 3063 -209 555 253 62 92 chr5 153825657 153825949 -45804201 + L2 LINE L2 2936 3218 -54 230 193 121 84 chr5 153825945 153826028 -45804122 + MER91C DNA MER1_type 55 140 0 * 542 281 141 5 chr5 153826511 153826696 -45803454 + MIR SINE MIR 53 262 0 508 247 46 96 chr5 153826958 153827197 -45802953 + MIR SINE MIR 36 262 0 221 271 42 21 chr5 153828212 153828308 -45801842 - MIR3 SINE MIR -9 199 102 300 304 130 0 chr5 153828494 153828609 -45801541 + L2 LINE L2 3141 3270 -2 602 246 60 68 chr5 153828759 153829011 -45801139 - MIR SINE MIR -11 251 2 396 244 0 0 chr5 153829183 153829273 -45800877 - MIR SINE MIR -56 206 117 180 259 37 62 chr5 153829471 153829552 -45800598 + L2 LINE L2 3009 3087 -185 1166 45 13 0 chr5 153830081 153830237 -45799913 + L1PA4 LINE L1 5994 6151 -4 483 282 193 5 chr5 153830408 153830621 -45799529 - L2 LINE L2 -26 3246 2994 936 267 28 12 chr5 153830624 153830779 -45799371 + MIR SINE MIR 6 157 -105 2276 95 3 0 chr5 153830779 153831088 -45799062 + AluSq SINE Alu 1 310 0 936 267 28 12 chr5 153831088 153831137 -45799013 + MIR SINE MIR 157 204 -58 2646 53 0 0 chr5 153831137 153831438 -45798712 + AluY SINE Alu 1 301 -10 936 267 28 12 chr5 153831438 153831482 -45798668 + MIR SINE MIR 204 260 -2 279 256 144 0 chr5 153831489 153831579 -45798571 + MIR SINE MIR 160 262 0 315 301 58 26 chr5 153831624 153831780 -45798370 - L2 LINE L2 -299 2973 2813 393 291 167 18 chr5 153832279 153832506 -45797644 - MIR SINE MIR 0 262 2 265 255 160 0 chr5 153832975 153833069 -45797081 + L2 LINE L2 3199 3307 -6 535 250 78 21 chr5 153833116 153833308 -45796842 - MIR SINE MIR -56 206 4 311 242 22 11 chr5 153834205 153834296 -45795854 + (CA)n Simple_repeat Simple_repeat 2 93 0 969 263 106 11 chr5 153834431 153834781 -45795369 - L2 LINE L2 0 3313 2931 402 203 30 68 chr5 153835651 153835784 -45794366 + L2 LINE L2 2622 2749 -565 913 289 54 11 chr5 153835846 153836216 -45793934 + LTR16A LTR ERVL 21 406 -44 822 190 115 52 chr5 153836336 153836605 -45793545 + L2 LINE L2 3028 3313 0 364 213 291 7 chr5 153836872 153837013 -45793137 + MIR SINE MIR 13 193 -69 236 308 55 0 chr5 153837011 153837102 -45793048 + L2 LINE L2 3134 3229 -43 * 194 263 97 31 chr5 153837724 153837817 -45792333 - MIR3 SINE MIR -41 167 110 295 296 143 47 chr5 153837839 153838140 -45792010 + L2 LINE L2 2372 2701 -613 1773 232 62 48 chr5 153838153 153838993 -45791157 - L2 LINE L2 0 3313 2452 201 283 54 54 chr5 153839007 153839099 -45791051 + L2 LINE L2 2742 2833 -481 951 244 11 60 chr5 153839143 153839409 -45790741 - MIR SINE MIR 0 262 10 306 317 88 85 chr5 153839420 153839795 -45790355 + L2 LINE L2 2891 3266 -6 545 239 155 0 chr5 153839937 153840092 -45790058 - MIR SINE MIR 0 262 84 423 38 0 0 chr5 153840626 153840679 -45789471 + (CA)n Simple_repeat Simple_repeat 2 54 0 220 286 29 50 chr5 153841197 153841337 -45788813 + G-rich Low_complexity Low_complexity 5 141 0 405 290 84 0 chr5 153841642 153841797 -45788353 - L2 LINE L2 -54 3259 3092 328 252 80 33 chr5 153842468 153842615 -45787535 + MIR SINE MIR 24 175 -36 307 309 154 30 chr5 153843351 153843584 -45786566 + L2 LINE L2 3011 3272 0 538 237 47 76 chr5 153844385 153844596 -45785554 - MIR SINE MIR -40 222 18 443 315 54 11 chr5 153844726 153844910 -45785240 - MIR SINE MIR -59 203 12 300 253 153 20 chr5 153845143 153845345 -45784805 - L2 LINE L2 -208 3064 2836 279 203 0 0 chr5 153845675 153845734 -45784416 - L2 LINE L2 -300 2972 2914 446 265 249 16 chr5 153845831 153846020 -45784130 + MIR SINE MIR 15 247 -15 530 347 55 5 chr5 153846649 153846868 -45783282 + MIR SINE MIR 31 260 -2 344 333 96 0 chr5 153848581 153848716 -45781434 - MIR SINE MIR -102 160 13 408 332 108 11 chr5 153849257 153849459 -45780691 + MIR SINE MIR 21 248 -14 546 302 57 24 chr5 153849749 153849961 -45780189 - MIR SINE MIR -40 222 4 180 0 0 0 chr5 153850441 153850461 -45779689 + (TG)n Simple_repeat Simple_repeat 1 20 0 572 269 33 28 chr5 153850582 153850764 -45779386 - MIR SINE MIR -10 252 70 335 189 216 0 chr5 153851702 153851813 -45778337 + MIR SINE MIR 78 212 -50 771 353 45 0 chr5 153852195 153852552 -45777598 + ERVL LTR ERVL 3641 4013 -1751 1037 355 57 19 chr5 153852584 153853110 -45777040 + ERVL LTR ERVL 3910 4455 -1309 364 182 0 11 chr5 153853120 153853208 -45776942 - L1M4 LINE L1 -1095 5051 4965 250 308 48 29 chr5 153853243 153853347 -45776803 + ERVL LTR ERVL 4595 4700 -1064 1009 306 86 39 chr5 153853427 153854012 -45776138 + ERVL LTR ERVL 4797 5408 -356 1655 119 88 0 chr5 153855111 153855404 -45774746 + AluSg SINE Alu 1 316 0 262 152 22 0 chr5 153855404 153855450 -45774700 + MSTB2 LTR MaLR 411 457 0 195 0 27 54 chr5 153856010 153856047 -45774103 + (TTAAA)n Simple_repeat Simple_repeat 1 36 0 639 221 0 8 chr5 153856047 153856178 -45773972 - MER3 DNA MER1_type -79 130 1 286 300 33 11 chr5 153856184 153856274 -45773876 - MIR SINE MIR -66 142 51 510 315 82 49 chr5 153856649 153857211 -45772939 + L2 LINE L2 2694 3271 -1 2193 97 0 13 chr5 153857252 153857563 -45772587 + AluSx SINE Alu 1 307 -5 403 240 87 77 chr5 153857944 153858127 -45772023 - MIR SINE MIR -10 252 68 1724 167 14 0 chr5 153858199 153858493 -45771657 - AluJo SINE Alu -14 298 1 1478 81 18 59 chr5 153858729 153858951 -45771199 + AluSq SINE Alu 1 213 -100 2081 159 71 0 chr5 153859086 153859525 -45770625 + Charlie4a DNA MER1_type 39 508 0 1144 249 185 8 chr5 153859612 153860006 -45770144 - LTR16B LTR ERVL 0 464 1 466 256 106 28 chr5 153860097 153860277 -45769873 + MIR SINE MIR 69 262 0 522 31 0 0 chr5 153860548 153860612 -45769538 + (CA)n Simple_repeat Simple_repeat 2 65 0 291 283 0 20 chr5 153861174 153861273 -45768877 + (TCTCTG)n Simple_repeat Simple_repeat 3 99 0 238 206 15 15 chr5 153861416 153861484 -45768666 + (CGGGG)n Simple_repeat Simple_repeat 5 72 0 305 267 7 30 chr5 153861639 153861774 -45768376 + (CCCCG)n Simple_repeat Simple_repeat 5 136 0 408 181 24 0 chr5 153862940 153863023 -45767127 + MIR SINE MIR 62 146 -62 343 287 98 35 chr5 153864228 153864402 -45765748 - L2 LINE L2 0 3313 3129 2266 102 0 0 chr5 153864402 153864706 -45765444 - AluSx SINE Alu -8 304 1 1179 247 63 77 chr5 153864722 153864925 -45765225 - L2 LINE L2 0 3313 3109 1668 110 0 0 chr5 153864925 153865153 -45764997 + AluSq SINE Alu 1 228 -85 1179 247 63 77 chr5 153865153 153865459 -45764691 - L2 LINE L2 -204 3109 2811 2015 107 7 13 chr5 153865462 153865762 -45764388 + AluSq SINE Alu 1 298 -15 1143 140 0 0 chr5 153865762 153865940 -45764210 + AluSg/x SINE Alu 133 310 0 990 228 210 0 chr5 153865987 153866277 -45763873 - L2 LINE L2 -528 2786 2436 638 240 0 0 chr5 153866279 153866408 -45763742 + MER33 DNA MER1_type 3 131 -193 954 131 6 0 chr5 153866497 153866672 -45763478 + MER33 DNA MER1_type 188 363 0 2657 248 113 25 chr5 153866673 153867349 -45762801 - L2 LINE L2 -872 2442 1652 2098 87 35 3 chr5 153867349 153867635 -45762515 - AluSc SINE Alu -14 295 1 2657 248 113 25 chr5 153867635 153867930 -45762220 - L2 LINE L2 -1662 1652 1385 2170 91 0 14 chr5 153867977 153868274 -45761876 - AluSg SINE Alu -17 293 1 28 0 0 0 chr5 153868274 153868302 -45761848 + AT_rich Low_complexity Low_complexity 1 28 0 526 256 36 0 chr5 153868304 153868441 -45761709 - MER5B DNA MER1_type -36 142 1 629 294 49 54 chr5 153868474 153868923 -45761227 - L2 LINE L2 -252 3061 2577 1704 108 30 54 chr5 153869165 153869460 -45760690 + AluJo SINE Alu 1 288 -24 2462 77 3 0 chr5 153869460 153869771 -45760379 + AluSp SINE Alu 1 312 -1 893 219 48 9 chr5 153873370 153873580 -45756570 + MIR SINE MIR 2 219 -43 634 295 83 29 chr5 153874110 153874351 -45755799 - MIR SINE MIR -2 260 7 239 217 337 0 chr5 153874571 153874663 -45755487 + MIR SINE MIR 124 246 -16 186 189 0 0 chr5 153874676 153874713 -45755437 + (ATG)n Simple_repeat Simple_repeat 3 39 0 937 189 28 125 chr5 153875156 153875329 -45754821 + MER5C DNA MER1_type 1 189 -135 1593 136 81 7 chr5 153875329 153875601 -45754549 + AluJo SINE Alu 1 292 -20 937 189 28 125 chr5 153875601 153875652 -45754498 + MER5C DNA MER1_type 189 243 -81 2160 109 0 3 chr5 153875652 153875964 -45754186 - AluSq SINE Alu -2 311 1 937 189 28 125 chr5 153875964 153875996 -45754154 + MER5C DNA MER1_type 243 277 -47 2065 97 27 7 chr5 153875996 153876296 -45753854 + AluSq SINE Alu 1 306 -7 937 189 28 125 chr5 153876296 153876396 -45753754 + MER5C DNA MER1_type 277 324 0 1368 132 81 21 chr5 153876529 153876764 -45753386 + AluJb SINE Alu 1 249 -63 195 42 0 0 chr5 153876850 153876874 -45753276 + (AATTG)n Simple_repeat Simple_repeat 2 25 0 245 306 13 38 chr5 153876919 153877076 -45753074 + CT-rich Low_complexity Low_complexity 3 155 0 1087 235 8 30 chr5 153877391 153877644 -45752506 + MIR SINE MIR 1 250 -12 2200 86 0 26 chr5 153877644 153877974 -45752176 - AluSx SINE Alu 0 322 1 1087 235 8 30 chr5 153877974 153877987 -45752163 + MIR SINE MIR 250 262 0 426 294 123 13 chr5 153878068 153878303 -45751847 + MIR SINE MIR 1 261 -1 511 315 55 14 chr5 153878893 153879102 -45751048 + MIR SINE MIR 24 243 -19 2162 118 3 6 chr5 153879307 153879620 -45750530 - AluSx SINE Alu 0 312 1 509 233 139 0 chr5 153879735 153879915 -45750235 + MER2 DNA MER2_type 141 345 0 1877 121 35 0 chr5 153880134 153880423 -45749727 + AluSq SINE Alu 1 299 -14 209 312 128 57 chr5 153880466 153880607 -45749543 - L2 LINE L2 -2 3311 3161 2071 191 53 18 chr5 153880608 153881189 -45748961 + MER82 DNA MER2_type 2 652 -1 236 223 154 15 chr5 153881189 153881319 -45748831 - L2 LINE L2 -157 3156 3009 288 77 0 0 chr5 153882096 153882135 -45748015 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 570 241 26 72 chr5 153882162 153882357 -45747793 + MIR SINE MIR 6 191 -71 2021 138 3 6 chr5 153882358 153882669 -45747481 + AluSx SINE Alu 1 310 -2 852 153 0 14 chr5 153882940 153883084 -45747066 + FLAM_C SINE Alu 1 142 -1 982 210 8 71 chr5 153883103 153883209 -45746941 + MER58A DNA MER1_type 2 86 -2334 2528 36 0 7 chr5 153883209 153883512 -45746638 - AluY SINE Alu -10 301 1 982 210 8 71 chr5 153883512 153883643 -45746507 + MER58A DNA MER1_type 86 224 0 410 221 177 0 chr5 153883648 153883761 -45746389 + L2 LINE L2 3137 3269 -3 303 239 0 0 chr5 153884526 153884593 -45745557 - L1M3f LINE L1 -5223 105 39 433 235 260 0 chr5 153884666 153884866 -45745284 - MIR SINE MIR -1 261 10 2465 278 79 47 chr5 153885417 153886794 -45743356 + L2 LINE L2 1887 3313 0 449 91 0 13 chr5 153888464 153888541 -45741609 + (TG)n Simple_repeat Simple_repeat 2 77 0 250 156 31 0 chr5 153888566 153888630 -45741520 + GA-rich Low_complexity Low_complexity 2 67 0 2247 112 3 0 chr5 153888685 153888989 -45741161 + AluSq SINE Alu 1 305 -8 652 269 155 5 chr5 153889014 153889233 -45740917 + MIR SINE MIR 8 259 -3 233 329 13 0 chr5 153889922 153889998 -45740152 + MIR3 SINE MIR 81 157 -51 941 292 115 45 chr5 153890333 153890550 -45739600 - L2 LINE L2 0 3313 3113 2101 110 7 0 chr5 153890550 153890842 -45739308 + AluSx SINE Alu 1 294 -18 941 292 115 45 chr5 153890842 153891617 -45738533 - L2 LINE L2 -200 3113 2252 937 229 28 20 chr5 153893444 153893693 -45736457 + MIR SINE MIR 11 261 -1 446 294 27 0 chr5 153894809 153894955 -45735195 + MIR SINE MIR 2 151 -111 981 294 100 3 chr5 153894964 153895478 -45734672 - L2 LINE L2 -1 3312 2724 256 254 0 17 chr5 153895474 153895533 -45734617 + MIR SINE MIR 190 247 -15 * 325 293 65 37 chr5 153895884 153896063 -45734087 + MIR SINE MIR 47 230 -32 964 253 39 21 chr5 153897247 153897480 -45732670 + MIR SINE MIR 1 237 -25 338 314 41 0 chr5 153898018 153898139 -45732011 + MIR SINE MIR 133 258 -4 826 293 12 28 chr5 153898140 153898393 -45731757 + MIR SINE MIR 3 251 -11 438 197 115 8 chr5 153899734 153899856 -45730294 + MIR SINE MIR 74 208 -54 2248 86 7 0 chr5 153899857 153900159 -45729991 - AluSp SINE Alu -9 304 1 652 213 67 49 chr5 153900237 153900481 -45729669 + MIR SINE MIR 16 259 -3 582 275 82 30 chr5 153900839 153901072 -45729078 + MIR SINE MIR 15 259 -3 1951 170 0 22 chr5 153901207 153901565 -45728585 - L1PB4 LINE L1 0 6156 5807 343 155 211 0 chr5 153901867 153901938 -45728212 - L2 LINE L2 -3 3310 3225 30 45 0 0 chr5 153906869 153906913 -45723237 + GC_rich Low_complexity Low_complexity 1 44 0 1272 174 58 27 chr5 153907825 153908118 -45722032 + AluJo SINE Alu 2 303 -9 585 300 130 44 chr5 153909044 153909552 -45720598 - L2 LINE L2 0 3272 2726 1434 188 86 71 chr5 153909767 153909883 -45720267 - L1MC5 LINE L1 -32 7929 7816 2293 95 0 0 chr5 153909883 153910188 -45719962 - AluSx SINE Alu -7 305 1 1434 188 86 71 chr5 153910188 153910592 -45719558 - L1MC5 LINE L1 -145 7816 7401 360 336 47 35 chr5 153910592 153910804 -45719346 - MIR SINE MIR -26 236 24 419 246 5 98 chr5 153911350 153911407 -45718743 - HAL1 LINE L1 -35 2472 2411 2320 86 0 3 chr5 153911407 153911711 -45718439 + AluSx SINE Alu 1 303 -9 419 246 5 98 chr5 153911711 153911868 -45718282 - HAL1 LINE L1 -96 2411 2278 930 239 63 5 chr5 153911868 153912073 -45718077 - MIR SINE MIR -31 231 15 973 211 90 13 chr5 153912097 153912409 -45717741 - HAL1 LINE L1 -189 2318 1983 762 102 0 0 chr5 153912439 153912547 -45717603 + AluSg/x SINE Alu 196 303 -9 966 214 51 25 chr5 153912656 153912745 -45717405 - L1ME1 LINE L1 -5 6161 6076 921 113 8 8 chr5 153912745 153912878 -45717272 + FLAM_C SINE Alu 1 133 0 966 214 51 25 chr5 153912878 153913064 -45717086 - L1ME1 LINE L1 -90 6076 5879 192 373 0 0 chr5 153913100 153913175 -45716975 - MIR SINE MIR 0 262 188 309 260 146 0 chr5 153913343 153913466 -45716684 + L2 LINE L2 3169 3309 -4 576 283 73 81 chr5 153914574 153914945 -45715205 + L2 LINE L2 2943 3310 -3 794 319 112 6 chr5 153916006 153916354 -45713796 - L2 LINE L2 -2 3311 2927 1501 172 4 15 chr5 153916354 153916615 -45713535 + AluJo SINE Alu 1 258 -54 781 285 76 40 chr5 153916617 153916912 -45713238 - L2 LINE L2 -469 2845 2537 180 0 0 0 chr5 153916912 153916932 -45713218 + (TG)n Simple_repeat Simple_repeat 2 21 0 1039 107 6 30 chr5 153916971 153917139 -45713011 - AluSg/x SINE Alu -12 300 137 306 244 374 0 chr5 153917262 153917393 -45712757 - L1ME3 LINE L1 -2 6160 5981 323 259 103 69 chr5 153918666 153918898 -45711252 - L1ME4a LINE L1 -2 6119 5880 474 251 72 53 chr5 153919016 153919153 -45710997 - L1ME4a LINE L1 -378 5743 5599 1912 123 3 65 chr5 153919153 153919477 -45710673 - AluJo SINE Alu -8 304 1 474 251 72 53 chr5 153919477 153919546 -45710604 - L1ME4a LINE L1 -522 5599 5533 271 149 28 140 chr5 153919628 153919735 -45710415 + L1MC5 LINE L1 7655 7749 -212 379 246 86 106 chr5 153920427 153920587 -45709563 - MIR SINE MIR -3 259 104 2185 77 3 32 chr5 153920587 153920898 -45709252 - AluSp SINE Alu -10 303 2 379 246 86 106 chr5 153920898 153920993 -45709157 - MIR SINE MIR -158 104 9 2293 92 3 0 chr5 153921102 153921407 -45708743 - AluSc SINE Alu -3 306 1 810 313 78 23 chr5 153921504 153922063 -45708087 + L2 LINE L2 2716 3313 0 204 328 16 0 chr5 153922940 153923004 -45707146 - MIR SINE MIR -4 258 194 271 179 36 0 chr5 153923125 153923181 -45706969 + MIR SINE MIR 171 228 -34 204 250 33 17 chr5 153923158 153923218 -45706932 + L2 LINE L2 3210 3270 -2 * 225 333 60 0 chr5 153923559 153923643 -45706507 - L2 LINE L2 -26 3246 3158 430 309 88 40 chr5 153923842 153924091 -45706059 + MIR SINE MIR 2 262 0 2375 60 0 7 chr5 153927971 153928272 -45701878 - AluY SINE Alu -12 299 1 2220 82 13 0 chr5 153928273 153928578 -45701572 - AluSg SINE Alu -1 309 1 27 49 0 0 chr5 153928587 153928628 -45701522 + AT_rich Low_complexity Low_complexity 1 41 0 397 227 0 0 chr5 153930137 153930212 -45699938 - L3 LINE CR1 -11 1566 1492 234 205 354 0 chr5 153930946 153930991 -45699159 - L1MA10 LINE L1 -2 6332 6288 2497 194 83 56 chr5 153930991 153931631 -45698519 - L1ME1 LINE L1 -79 6087 5421 2059 121 0 0 chr5 153931631 153931947 -45698203 - AluSq SINE Alu 0 316 1 2497 194 83 56 chr5 153931947 153932055 -45698095 - L1ME1 LINE L1 -745 5421 5317 208 211 0 0 chr5 153932095 153932133 -45698017 + CT-rich Low_complexity Low_complexity 3 40 0 842 239 21 5 chr5 153932145 153932333 -45697817 - AluJb SINE Alu 0 312 122 432 246 94 0 chr5 153932333 153932471 -45697679 - L1ME1 LINE L1 -956 5190 5040 1657 159 3 49 chr5 153932800 153933127 -45697023 - AluJb SINE Alu 0 312 1 767 121 0 108 chr5 153933130 153933171 -45696979 - FLAM_C SINE Alu -172 140 96 1651 109 31 75 chr5 153933171 153933322 -45696828 + AluSg SINE Alu 1 133 -177 2290 83 7 0 chr5 153933322 153933622 -45696528 + AluSc SINE Alu 1 302 -7 1651 109 31 75 chr5 153933622 153933793 -45696357 + AluSg SINE Alu 133 310 0 767 121 0 108 chr5 153933793 153933905 -45696245 - FLAM_C SINE Alu -216 96 1 850 295 33 20 chr5 153934272 153934516 -45695634 - MIR SINE MIR -14 248 2 235 286 167 83 chr5 153935542 153935597 -45694553 - MIR3 SINE MIR -7 201 152 1017 146 6 12 chr5 153935597 153935761 -45694389 - FRAM SINE Alu -3 163 1 235 286 167 83 chr5 153935761 153935873 -45694277 - MIR3 SINE MIR -56 152 20 307 292 44 26 chr5 153935896 153936009 -45694141 + MIR3 SINE MIR 66 180 -28 1986 100 0 0 chr5 153937258 153937529 -45692621 + AluSx SINE Alu 34 304 -8 325 311 135 20 chr5 153938176 153938324 -45691826 - MIR3 SINE MIR -24 184 20 507 92 92 0 chr5 153940550 153940637 -45689513 - L1MA9 LINE L1 0 6312 6218 2133 100 3 0 chr5 153941405 153941696 -45688454 + AluY SINE Alu 1 292 -19 26 0 0 0 chr5 153942200 153942226 -45687924 + AT_rich Low_complexity Low_complexity 1 26 0 1736 155 14 7 chr5 153942332 153942616 -45687534 + AluSx SINE Alu 3 288 -24 185 0 40 0 chr5 153942655 153942680 -45687470 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 2600 70 0 0 chr5 153942680 153943008 -45687142 - L1PA5 LINE L1 0 6154 5827 204 298 18 18 chr5 153943279 153943336 -45686814 - MIR SINE MIR -123 139 83 1788 202 114 56 chr5 153943435 153943893 -45686257 - MLT1E2 LTR MaLR 0 626 123 708 189 8 23 chr5 153943893 153944049 -45686101 + FLAM_A SINE Alu 1 133 0 1788 202 114 56 chr5 153944049 153944180 -45685970 - MLT1E2 LTR MaLR -503 123 1 748 120 0 9 chr5 153944296 153944404 -45685746 + AluSq SINE Alu 129 235 -78 2967 226 198 7 chr5 153946252 153947202 -45682948 - HAL1 LINE L1 -629 1878 748 522 143 79 8 chr5 153947203 153947409 -45682741 - Charlie5 DNA MER1_type 0 2624 2356 243 0 0 0 chr5 153947409 153947436 -45682714 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1070 175 71 93 chr5 153947443 153947576 -45682574 - AluJo SINE Alu -38 274 140 2287 74 3 17 chr5 153947576 153947872 -45682278 - AluY SINE Alu -19 292 1 1070 175 71 93 chr5 153947872 153948018 -45682132 - AluJo SINE Alu -172 140 1 4768 132 66 56 chr5 153948028 153948128 -45682022 - L1MC1 LINE L1 0 6333 6236 2190 137 18 49 chr5 153948128 153948514 -45681636 - THE1C LTR MaLR 0 375 2 4768 132 66 56 chr5 153948514 153948852 -45681298 - L1MC1 LINE L1 -97 6236 5903 2403 100 0 0 chr5 153948852 153949161 -45680989 - AluSq SINE Alu -4 309 1 1963 142 0 3 chr5 153949164 153949460 -45680690 - AluSx SINE Alu -17 295 1 4768 132 66 56 chr5 153949460 153949823 -45680327 - L1MC1 LINE L1 -431 5902 5513 1987 96 85 4 chr5 153949823 153950104 -45680046 + AluSx SINE Alu 1 304 -8 4768 132 66 56 chr5 153950104 153950250 -45679900 - L1MC1 LINE L1 -820 5513 5370 343 202 83 18 chr5 153950250 153950359 -45679791 - Charlie5 DNA MER1_type -2496 116 1 1986 239 88 48 chr5 153950401 153951046 -45679104 - HAL1 LINE L1 -1835 672 2 327 25 0 0 chr5 153951392 153951432 -45678718 + (TTG)n Simple_repeat Simple_repeat 2 41 0 2328 82 0 28 chr5 153951799 153952117 -45678033 - AluSg SINE Alu 0 310 2 288 0 0 0 chr5 153952192 153952224 -45677926 + (TA)n Simple_repeat Simple_repeat 2 33 0 403 313 67 7 chr5 153952327 153952477 -45677673 + MIR3 SINE MIR 36 194 -14 544 308 113 41 chr5 153952712 153953153 -45676997 - L2 LINE L2 -340 2974 2502 883 131 0 15 chr5 153953871 153954001 -45676149 + FLAM_A SINE Alu 2 129 -4 402 258 156 55 chr5 153954126 153954491 -45675659 - L1ME3A LINE L1 -15 6155 5754 775 256 162 18 chr5 153955026 153955459 -45674691 - L1ME3A LINE L1 -396 5768 5277 256 167 0 0 chr5 153957576 153957618 -45672532 + MIR SINE MIR 203 244 -18 570 241 8 124 chr5 153957727 153957968 -45672182 - MER102b DNA MER1_type -3 338 126 453 231 73 84 chr5 153957968 153958132 -45672018 - L1MC5 LINE L1 -299 7662 7501 1701 133 76 0 chr5 153958132 153958395 -45671755 - AluSg SINE Alu -22 288 6 453 231 73 84 chr5 153958395 153958516 -45671634 - L1MC5 LINE L1 -460 7501 7380 2339 85 0 7 chr5 153958665 153958959 -45671191 + AluSg SINE Alu 1 292 -18 861 165 8 0 chr5 153960079 153960212 -45669938 + AluJo SINE Alu 1 134 -178 2471 67 0 19 chr5 153961832 153962147 -45668003 - AluY SINE Alu -2 309 1 2416 195 49 16 chr5 153962513 153962965 -45667185 - MLT1C LTR MaLR 0 467 1 539 233 70 118 chr5 153963786 153963946 -45666204 - L1ME4a LINE L1 -225 5896 5730 2416 78 0 0 chr5 153963946 153964252 -45665898 - AluSg SINE Alu -4 306 1 539 233 70 118 chr5 153964252 153964465 -45665685 - L1ME4a LINE L1 -391 5730 5541 2382 97 0 0 chr5 153968245 153968553 -45661597 - AluSx SINE Alu -4 308 1 584 322 23 34 chr5 153969494 153969671 -45660479 + MIR3 SINE MIR 23 197 -11 336 24 0 0 chr5 153969889 153969930 -45660220 + (TCC)n Simple_repeat Simple_repeat 3 43 0 2694 23 3 0 chr5 153970463 153970765 -45659385 - AluY SINE Alu -8 303 1 596 100 0 0 chr5 153971135 153971215 -45658935 - AluSg SINE Alu -13 296 217 1475 97 0 0 chr5 153971215 153971400 -45658750 - AluSg SINE Alu -125 185 1 285 303 117 41 chr5 153972799 153972944 -45657206 - MIR SINE MIR -51 211 56 2283 103 7 0 chr5 153974129 153974439 -45655711 - AluSx SINE Alu 0 312 1 243 240 192 19 chr5 153974608 153974712 -45655438 - MIR SINE MIR -120 142 21 3557 230 130 81 chr5 153976640 153976989 -45653161 + L2 LINE L2 14 344 -2970 2117 120 0 0 chr5 153976989 153977317 -45652833 - AluSx SINE Alu 0 328 1 3557 230 130 81 chr5 153977317 153978429 -45651721 + L2 LINE L2 344 1548 -1766 228 304 89 0 chr5 153978827 153978939 -45651211 - L1MC/D LINE L1 -2074 5734 5613 206 245 0 0 chr5 153981270 153981323 -45648827 + T-rich Low_complexity Low_complexity 1 53 0 541 229 181 37 chr5 153981338 153981609 -45648541 - L1MC4a LINE L1 -1680 6128 5819 793 213 286 11 chr5 153983683 153984054 -45646096 + L1MC5 LINE L1 7452 7924 -37 816 235 111 37 chr5 153986507 153986912 -45643238 - L1MC5 LINE L1 -70 7891 7457 2266 84 0 11 chr5 153986937 153987247 -45642903 + AluSx SINE Alu 2 308 0 1059 283 96 57 chr5 153989008 153989655 -45640495 - L1M4 LINE L1 -2122 4024 3325 2096 111 7 0 chr5 153989655 153989934 -45640216 - AluSq SINE Alu -32 281 1 1059 283 96 57 chr5 153989934 153990266 -45639884 - L1M4 LINE L1 -2821 3325 3007 2270 85 0 10 chr5 153990280 153990573 -45639577 - AluSq SINE Alu -23 290 1 1916 126 0 11 chr5 153990655 153990924 -45639226 - AluSx SINE Alu -46 266 1 1340 139 11 71 chr5 153990950 153991216 -45638934 - MLT1B LTR MaLR 0 390 141 2619 173 39 58 chr5 153991242 153991577 -45638573 - MLT1D LTR MaLR 0 505 182 984 217 0 0 chr5 153991577 153991743 -45638407 + FRAM SINE Alu 1 166 0 2619 173 39 58 chr5 153991743 153991922 -45638228 - MLT1D LTR MaLR -323 182 1 496 273 133 10 chr5 153991928 153992221 -45637929 - L1M4 LINE L1 -3294 2852 2524 1358 174 136 72 chr5 153992268 153992477 -45637673 - L1MC4 LINE L1 0 8837 8643 1681 150 45 28 chr5 153992477 153992763 -45637387 - AluJo SINE Alu -21 291 1 1358 174 136 72 chr5 153992763 153992972 -45637178 - L1MC4 LINE L1 -194 8643 8392 966 164 60 0 chr5 153992972 153993155 -45636995 - LTR52 LTR ERVL -3 418 225 1011 165 37 0 chr5 153993155 153993319 -45636831 + AluJb SINE Alu 135 304 -8 764 225 16 32 chr5 153993319 153993506 -45636644 - LTR52 LTR ERVL -186 235 52 448 145 108 24 chr5 153993521 153993604 -45636546 - LTR52 LTR ERVL -331 90 1 877 221 49 62 chr5 153993637 153994110 -45636040 - L1MC4 LINE L1 -512 8325 2905 1729 234 110 19 chr5 153994112 153994851 -45635299 - L1M4 LINE L1 -3187 2959 2154 339 315 72 12 chr5 153994849 153995100 -45635050 - L1MC4 LINE L1 -4159 2963 2698 * 1313 155 4 47 chr5 153995100 153995332 -45634818 - AluJb SINE Alu -6 306 85 553 274 120 65 chr5 153995462 153995721 -45634429 - L1MC4 LINE L1 -4604 2518 2275 1651 182 18 7 chr5 153995721 153996001 -45634149 - AluJo SINE Alu -19 293 11 553 274 120 65 chr5 153996001 153996440 -45633710 - L1MC4 LINE L1 -4847 2275 1862 2135 82 61 0 chr5 153996440 153996733 -45633417 - AluY SINE Alu 0 311 1 553 274 120 65 chr5 153996733 153997101 -45633049 - L1MC4 LINE L1 -5260 1862 1183 2195 106 13 10 chr5 153997255 153997558 -45632592 - AluSg SINE Alu -6 304 1 1737 111 4 0 chr5 153997599 153997833 -45632317 - AluSx SINE Alu -77 235 1 227 357 8 0 chr5 153997908 153998034 -45632116 - L1M4 LINE L1 -1114 5032 4906 682 163 181 38 chr5 153998038 153998198 -45631952 + MER58A DNA MER1_type 1 183 -41 1684 182 30 0 chr5 153998268 153998564 -45631586 - AluJo SINE Alu -7 305 1 2778 190 133 49 chr5 153998625 153999593 -45630557 - L1MB8 LINE L1 0 6178 5107 2501 74 0 3 chr5 153999593 153999905 -45630245 - AluY SINE Alu 0 311 1 2778 190 133 49 chr5 153999905 154000030 -45630120 - L1MB8 LINE L1 -1071 5107 4994 2114 167 86 18 chr5 154000080 154000149 -45630001 - L1MB7 LINE L1 -18 6166 6103 1491 163 160 12 chr5 154000149 154000468 -45629682 - MER47A DNA MER2_type 0 366 1 2114 167 86 18 chr5 154000468 154000842 -45629308 - L1MB7 LINE L1 -81 6103 5693 669 205 54 16 chr5 154000846 154001031 -45629119 - L1MC4 LINE L1 -140 7902 7711 2869 186 25 19 chr5 154001068 154001480 -45628670 - L1MB5 LINE L1 -8 6166 5749 2198 120 0 3 chr5 154001480 154001780 -45628370 - AluSg SINE Alu -9 301 3 2869 186 25 19 chr5 154001780 154001932 -45628218 - L1MB5 LINE L1 -425 5749 5599 617 216 29 0 chr5 154001945 154002084 -45628066 - L1MB5 LINE L1 -1556 4590 4448 2319 110 10 0 chr5 154002132 154002528 -45627622 - AluSx SINE Alu 0 399 1 741 208 25 46 chr5 154002555 154002752 -45627398 - L1MB5 LINE L1 -2036 4110 3918 619 196 45 0 chr5 154002762 154002895 -45627255 + MER104 DNA Tc2 39 177 -3 1831 115 4 4 chr5 154002895 154003156 -45626994 - AluSx SINE Alu -51 261 1 2147 114 0 26 chr5 154003218 154003354 -45626796 + AluSx SINE Alu 1 139 -173 2234 103 3 0 chr5 154003354 154003646 -45626504 + AluSg SINE Alu 1 293 -17 2147 114 0 26 chr5 154003646 154003816 -45626334 + AluSx SINE Alu 139 299 -13 1645 235 41 19 chr5 154003827 154004363 -45625787 + L1M4 LINE L1 2967 3514 -2632 1100 55 0 0 chr5 154004368 154004495 -45625655 + AluSc SINE Alu 5 131 -178 1025 191 39 39 chr5 154004513 154004645 -45625505 + L1M4 LINE L1 3495 3629 -2517 2103 128 0 7 chr5 154004645 154004941 -45625209 - AluSx SINE Alu -18 294 1 1025 191 39 39 chr5 154004941 154005064 -45625086 + L1M4 LINE L1 3628 3750 -2396 1652 172 32 3 chr5 154005066 154005201 -45624949 + AluSx SINE Alu 1 131 -181 1832 80 0 0 chr5 154005201 154005425 -45624725 + AluSq SINE Alu 1 224 -89 1652 172 32 3 chr5 154005425 154005574 -45624576 + AluSx SINE Alu 131 293 -19 2515 73 0 0 chr5 154005574 154005876 -45624274 + AluY SINE Alu 1 302 -9 991 182 0 0 chr5 154005877 154006031 -45624119 + AluJb SINE Alu 136 289 -23 874 190 13 44 chr5 154006047 154006273 -45623877 - L1MDa LINE L1 -4127 2413 2195 2568 68 3 0 chr5 154006424 154006732 -45623418 - AluSp SINE Alu -4 309 1 1831 153 14 10 chr5 154006752 154007046 -45623104 - AluJb SINE Alu -17 295 1 1529 252 43 47 chr5 154007054 154007565 -45622585 + L2 LINE L2 2805 3313 0 1982 148 0 7 chr5 154007625 154007916 -45622234 - AluJb SINE Alu -23 289 1 1830 165 0 7 chr5 154008687 154008984 -45621166 + AluJb SINE Alu 5 299 -13 1091 155 46 0 chr5 154009071 154009245 -45620905 + MER58A DNA MER1_type 43 224 0 218 341 106 6 chr5 154009697 154009876 -45620274 - MIR SINE MIR -15 247 51 1471 169 32 12 chr5 154009876 154010124 -45620026 - AluJb SINE Alu -6 306 54 789 179 0 0 chr5 154010251 154010368 -45619782 - FLAM_C SINE Alu -15 118 2 253 247 78 26 chr5 154010829 154010906 -45619244 - MIR SINE MIR -110 152 72 1534 168 24 17 chr5 154011518 154011815 -45618335 + AluJo SINE Alu 3 301 -11 1997 143 3 7 chr5 154012246 154012554 -45617596 + AluSx SINE Alu 1 307 -5 931 190 0 18 chr5 154012555 154012718 -45617432 + AluJb SINE Alu 135 294 -18 1600 172 4 4 chr5 154012995 154013257 -45616893 - MER68 LTR ERV1 -295 267 6 8440 171 70 36 chr5 154013257 154013409 -45616741 - HERVL LTR ERVL -13 3024 2879 2335 96 7 3 chr5 154013409 154013711 -45616439 + AluSq SINE Alu 4 306 -7 8440 171 70 36 chr5 154013711 154015261 -45614889 - HERVL LTR ERVL -158 2879 1265 738 186 0 16 chr5 154015262 154015391 -45614759 - MER68 LTR ERV1 -434 128 2 215 31 31 0 chr5 154015394 154015426 -45614724 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2121 83 47 0 chr5 154015429 154015705 -45614445 - AluSp SINE Alu -24 289 1 1009 306 33 20 chr5 154015734 154016132 -45614018 - HERVL LTR ERVL -2868 2128 1726 1780 164 54 0 chr5 154016135 154016433 -45613717 + MSTB1 LTR MaLR 1 314 -118 365 182 82 9 chr5 154016589 154016699 -45613451 + L1ME3A LINE L1 4568 4685 -1461 * 862 232 27 80 chr5 154016691 154017085 -45613065 + L1ME3A LINE L1 5688 6042 -124 2018 102 84 0 chr5 154017085 154017370 -45612780 - AluSx SINE Alu -3 309 1 862 232 27 80 chr5 154017370 154017488 -45612662 + L1ME3A LINE L1 6042 6165 -1 1206 159 4 69 chr5 154017994 154018078 -45612072 - AluJo SINE Alu -95 217 129 2420 62 3 40 chr5 154018078 154018400 -45611750 - AluY SINE Alu -1 310 1 1206 159 4 69 chr5 154018400 154018547 -45611603 - AluJo SINE Alu -183 129 1 2543 116 3 5 chr5 154019717 154020089 -45610061 + L1MA4 LINE L1 5488 5858 -442 463 233 19 0 chr5 154020092 154020195 -45609955 - HERVL LTR ERVL -1224 4430 4326 509 263 100 6 chr5 154020240 154020400 -45609750 - HERVL LTR ERVL -1487 4277 4103 333 222 0 0 chr5 154020405 154020477 -45609673 + MIR SINE MIR 181 252 -10 1169 312 40 67 chr5 154020507 154020725 -45609425 - HERVL LTR ERVL -1677 4087 3865 1839 176 7 104 chr5 154020725 154020961 -45609189 + MLT1B LTR MaLR 1 178 -212 1757 167 30 0 chr5 154020961 154021260 -45608890 + AluJb SINE Alu 1 308 -4 1839 176 7 104 chr5 154021260 154021455 -45608695 + MLT1B LTR MaLR 178 390 0 1169 312 40 67 chr5 154021455 154021860 -45608290 - HERVL LTR ERVL -1899 3865 3485 782 194 0 8 chr5 154021860 154021989 -45608161 + FLAM_A SINE Alu 1 128 -5 1169 312 40 67 chr5 154021989 154022131 -45608019 - HERVL LTR ERVL -2279 3485 3341 734 260 104 88 chr5 154022133 154022374 -45607776 - LTR16A LTR ERVL 0 450 197 1757 159 3 14 chr5 154022374 154022657 -45607493 - AluJb SINE Alu -32 280 1 734 260 104 88 chr5 154022657 154022858 -45607292 - LTR16A LTR ERVL -253 197 1 276 283 30 54 chr5 154023185 154023351 -45606799 - ERVL LTR ERVL -300 4696 4535 2608 165 20 11 chr5 154023605 154024059 -45606091 - MER88 LTR ERVL -6 458 1 1136 333 72 38 chr5 154024090 154024939 -45605211 - ERVL LTR ERVL -1329 4156 3337 2817 122 49 2 chr5 154024939 154025348 -45604802 - MSTA LTR MaLR 0 428 1 1136 333 72 38 chr5 154025348 154026270 -45603880 - ERVL LTR ERVL -2148 3337 2282 969 275 64 13 chr5 154026314 154026612 -45603538 - ERVL LTR ERVL -2790 2206 1894 1110 68 0 0 chr5 154026629 154026761 -45603389 - AluYb8 SINE Alu -186 132 1 1003 314 31 31 chr5 154026762 154026893 -45603257 - ERVL LTR ERVL -3093 1903 1774 2032 63 86 19 chr5 154026893 154027162 -45602988 - AluSp SINE Alu -26 287 1 1003 314 31 31 chr5 154027162 154027563 -45602587 - ERVL LTR ERVL -3222 1774 1305 1101 60 24 12 chr5 154027565 154027731 -45602419 + (TTTC)n Simple_repeat Simple_repeat 1 168 0 395 118 0 15 chr5 154027746 154027814 -45602336 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 2579 68 3 0 chr5 154027814 154028124 -45602026 - AluY SINE Alu 0 311 1 414 344 0 0 chr5 154028125 154028253 -45601897 - ERVL LTR ERVL -3683 1313 1186 2156 199 113 26 chr5 154028253 154028721 -45601429 + MLT2B2 LTR ERVL 1 509 -6 3401 278 88 16 chr5 154028732 154029817 -45600333 - ERVL LTR ERVL -3831 1165 2 1527 288 36 2 chr5 154029828 154030248 -45599902 - LTR16A LTR ERVL -14 436 3 1801 154 34 13 chr5 154030261 154030559 -45599591 + AluJb SINE Alu 1 304 -8 2904 163 51 26 chr5 154030583 154031091 -45599059 - MER21B LTR ERV1 -342 521 1 3301 139 90 29 chr5 154031155 154031767 -45598383 - MER21B-int LTR ERV1 -42 4149 3501 941 155 23 46 chr5 154031765 154031939 -45598211 - MER21B-int LTR ERV1 -1754 2437 2268 * 1030 149 13 0 chr5 154031937 154032091 -45598059 - MER4B-int LTR ERV1 -2958 3800 3645 798 164 103 7 chr5 154032102 154032248 -45597902 - MER21A LTR ERV1 -358 573 414 1817 215 151 10 chr5 154032271 154032788 -45597362 - L1MC4a LINE L1 -5 7803 7214 1370 303 44 52 chr5 154032842 154032987 -45597163 - ERVL-E LTR ERVL -2420 3344 3199 2051 127 0 3 chr5 154032987 154033279 -45596871 - AluSx SINE Alu -20 292 2 1370 303 44 52 chr5 154033279 154033771 -45596379 - ERVL-E LTR ERVL -2565 3199 2712 267 220 0 0 chr5 154033786 154033836 -45596314 - Zaphod DNA AcHobo 0 4031 3982 1120 52 0 33 chr5 154033844 154033997 -45596153 + AluY SINE Alu 163 310 -1 189 94 0 0 chr5 154034019 154034051 -45596099 + (T)n Simple_repeat Simple_repeat 1 32 0 2497 87 0 0 chr5 154034429 154034739 -45595411 - AluSx SINE Alu -2 310 1 415 141 35 35 chr5 154034869 154034954 -45595196 + LTR45 LTR ERV1 441 525 0 585 328 66 27 chr5 154035018 154035381 -45594769 - ERVL-E LTR ERVL -4498 1156 774 347 356 43 32 chr5 154035431 154035796 -45594354 - ERVL-E LTR ERVL -5042 612 300 2572 119 8 0 chr5 154036504 154036856 -45593294 + THE1A LTR MaLR 1 355 0 1119 294 30 47 chr5 154036881 154037286 -45592864 + LTR16C LTR ERVL 94 491 0 703 342 47 32 chr5 154037293 154037886 -45592264 + HERV16 LTR ERVL 22 623 -4373 2139 107 0 14 chr5 154038114 154038426 -45591724 + AluSc SINE Alu 1 309 0 2269 112 0 0 chr5 154038848 154039142 -45591008 - AluSx SINE Alu -18 294 1 23 33 0 0 chr5 154039195 154039225 -45590925 + AT_rich Low_complexity Low_complexity 1 30 0 670 192 0 0 chr5 154039556 154039660 -45590490 - FLAM_C SINE Alu -38 105 2 930 341 113 34 chr5 154039976 154040227 -45589923 - MLT2E LTR ERVL -22 606 376 2201 104 50 0 chr5 154040227 154040524 -45589626 - AluSx SINE Alu 0 312 1 930 341 113 34 chr5 154040524 154040803 -45589347 - MLT2E LTR ERVL -252 376 34 380 241 191 8 chr5 154041212 154041453 -45588697 + L1M4 LINE L1 2793 3077 -3069 2749 191 66 2 chr5 154041982 154042020 -45588130 - MLT2B2 LTR ERVL -2 513 479 189 74 0 0 chr5 154042020 154042047 -45588103 + (TAGA)n Simple_repeat Simple_repeat 2 28 0 2749 191 66 2 chr5 154042047 154042490 -45587660 - MLT2B2 LTR ERVL -36 479 1 2445 102 0 0 chr5 154043022 154043327 -45586823 - AluSx SINE Alu -7 305 1 2299 249 99 29 chr5 154043823 154044442 -45585708 + L1MEc LINE L1 1974 2548 -3667 5423 60 23 0 chr5 154044442 154045106 -45585044 + L1PA6 LINE L1 5476 6154 0 2299 249 99 29 chr5 154045106 154045716 -45584434 + L1MEc LINE L1 2548 3239 -2976 1062 194 0 31 chr5 154045729 154045925 -45584225 + AluJo SINE Alu 11 200 -112 1892 118 37 4 chr5 154045958 154046230 -45583920 - AluSq SINE Alu -32 281 1 415 176 15 0 chr5 154046232 154046300 -45583850 + AluJo SINE Alu 189 257 -55 1488 296 13 13 chr5 154046320 154046924 -45583226 + L1MEc LINE L1 3228 3831 -2384 226 217 0 0 chr5 154047726 154047772 -45582378 + (CA)n Simple_repeat Simple_repeat 2 47 0 259 250 0 38 chr5 154049369 154049449 -45580701 + MLT1K LTR MaLR 510 586 -2 1501 178 78 94 chr5 154051587 154052019 -45578131 - MER66A LTR ERV1 0 478 97 3161 212 30 88 chr5 154052451 154053393 -45576757 - MLT1-int LTR MaLR -484 887 1 785 257 19 62 chr5 154053393 154053700 -45576450 - MLT2C1 LTR ERVL 0 397 104 663 186 43 85 chr5 154053594 154053782 -45576368 - MLT1E2 LTR MaLR -434 192 13 * 24 32 0 0 chr5 154054661 154054692 -45575458 + AT_rich Low_complexity Low_complexity 1 31 0 253 257 181 9 chr5 154057590 154057695 -45572455 - L2 LINE L2 0 3313 3191 506 259 93 39 chr5 154057995 154058023 -45572127 + L2 LINE L2 3094 3119 -194 1713 186 16 13 chr5 154058023 154058334 -45571816 - AluJo SINE Alu 0 312 1 506 259 93 39 chr5 154058334 154058510 -45571640 + L2 LINE L2 3119 3309 -4 1616 66 93 107 chr5 154059654 154059943 -45570207 + AluSq SINE Alu 1 285 -28 190 224 69 17 chr5 154063481 154063539 -45566611 + MIR3 SINE MIR 13 73 -135 21 0 0 0 chr5 154064053 154064074 -45566076 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 154064273 154064311 -45565839 + AT_rich Low_complexity Low_complexity 1 38 0 201 351 13 0 chr5 154064757 154064834 -45565316 + CT-rich Low_complexity Low_complexity 3 80 0 692 210 0 0 chr5 154064994 154065118 -45565032 + FLAM_C SINE Alu 14 137 -6 339 25 0 0 chr5 154065120 154065160 -45564990 + (TG)n Simple_repeat Simple_repeat 2 41 0 348 313 121 77 chr5 154069216 154070253 -45559897 - L2 LINE L2 0 3272 2203 307 388 0 11 chr5 154070259 154070442 -45559708 - L2 LINE L2 -2423 891 711 700 294 52 43 chr5 154070766 154071450 -45558700 - L1MEd LINE L1 -4862 1257 639 326 0 0 0 chr5 154071473 154071511 -45558639 + AluY SINE Alu 254 291 -9 2205 100 0 10 chr5 154071554 154071853 -45558297 + AluSp SINE Alu 1 296 -17 8367 12 1 0 chr5 154072523 154073468 -45556682 + L1PA2 LINE L1 5207 6152 -3 340 373 84 0 chr5 154073498 154073806 -45556344 - L1ME2 LINE L1 -274 5890 5557 548 313 103 22 chr5 154073978 154074757 -45555393 - L1ME2 LINE L1 -842 5304 4463 1768 192 0 3 chr5 154075662 154075964 -45554186 + AluJb SINE Alu 1 301 -11 1321 179 4 19 chr5 154075967 154076224 -45553926 + AluJo SINE Alu 46 298 -14 237 67 22 22 chr5 154076629 154076674 -45553476 - L1MC5 LINE L1 -277 7684 7640 432 262 70 31 chr5 154079596 154079825 -45550325 - L1MC5 LINE L1 -187 7774 7537 22 0 0 0 chr5 154079994 154080016 -45550134 + AT_rich Low_complexity Low_complexity 1 22 0 191 418 0 0 chr5 154080031 154080098 -45550052 - L2 LINE L2 -78 3194 3128 605 282 81 14 chr5 154080175 154080384 -45549766 + MIR SINE MIR 4 226 -36 204 315 112 11 chr5 154080415 154080504 -45549646 - L2 LINE L2 -199 3073 2976 514 331 101 49 chr5 154080689 154081244 -45548906 - L2 LINE L2 -572 2742 2159 233 155 0 56 chr5 154081245 154081316 -45548834 + (TA)n Simple_repeat Simple_repeat 1 67 0 243 0 0 0 chr5 154081337 154081364 -45548786 + (TA)n Simple_repeat Simple_repeat 2 28 0 221 325 18 9 chr5 154081517 154081631 -45548519 - L2 LINE L2 -1293 2021 1907 505 303 58 5 chr5 154081635 154081823 -45548327 + MLT1J LTR MaLR 1 198 -313 275 314 57 8 chr5 154082101 154082225 -45547925 - L2 LINE L2 -1402 1912 1783 308 75 0 0 chr5 154082231 154082271 -45547879 - Alu SINE Alu -10 292 253 753 346 122 34 chr5 154082321 154083302 -45546848 - L2 LINE L2 -1543 1771 704 332 165 63 51 chr5 154083957 154084036 -45546114 + AluJb SINE Alu 67 146 -156 1077 155 34 115 chr5 154084042 154084161 -45545989 + AluJo SINE Alu 41 168 -144 194 0 39 0 chr5 154084161 154084187 -45545963 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1077 155 34 115 chr5 154084187 154084363 -45545787 + AluJo SINE Alu 168 312 0 1628 149 3 55 chr5 154084559 154084848 -45545302 + AluJb SINE Alu 15 288 -24 494 286 84 0 chr5 154085240 154085467 -45544683 - MER112 DNA MER1_type -7 253 8 584 173 29 0 chr5 154089226 154089330 -45540820 + MIR SINE MIR 74 180 -82 598 241 132 56 chr5 154089704 154090152 -45539998 - L1MC5 LINE L1 -45 7916 7435 306 314 21 14 chr5 154090891 154091031 -45539119 + MIR SINE MIR 1 141 -121 758 320 90 66 chr5 154095333 154096292 -45533858 + HAL1 LINE L1 12 993 -1514 337 318 0 9 chr5 154096295 154096405 -45533745 - MIR SINE MIR 0 262 154 316 272 70 18 chr5 154096464 154096578 -45533572 + MIR SINE MIR 48 167 -95 532 286 80 30 chr5 154096579 154096915 -45533235 + HAL1 LINE L1 954 1306 -1201 738 192 32 0 chr5 154096925 154097050 -45533100 - FLAM_C SINE Alu -13 130 2 803 189 65 0 chr5 154097100 154097253 -45532897 + FAM SINE Alu 12 174 -11 1442 241 141 52 chr5 154097358 154098002 -45532148 + HAL1 LINE L1 1451 2189 -318 2124 125 10 0 chr5 154098002 154098297 -45531853 + AluSx SINE Alu 1 298 -14 1442 241 141 52 chr5 154098297 154098497 -45531653 + HAL1 LINE L1 2189 2370 -137 2284 119 0 3 chr5 154098551 154098863 -45531287 - AluSx SINE Alu -1 311 1 1976 93 48 0 chr5 154099415 154099707 -45530443 + AluSq SINE Alu 3 307 0 1619 178 17 0 chr5 154099900 154100187 -45529963 + AluJb SINE Alu 20 311 -1 2090 108 0 46 chr5 154100187 154100511 -45529639 + AluSg SINE Alu 1 309 -1 799 309 61 72 chr5 154104423 154105409 -45524741 + HAL1 LINE L1 19 993 -1514 256 304 69 0 chr5 154105412 154105514 -45524636 - MIR SINE MIR 0 262 154 323 302 32 0 chr5 154105550 154105676 -45524474 + MIR SINE MIR 68 197 -65 1191 280 132 43 chr5 154105679 154106944 -45523206 + HAL1 LINE L1 986 2363 -144 28 79 0 0 chr5 154106978 154107041 -45523109 + AT_rich Low_complexity Low_complexity 1 63 0 2113 120 3 7 chr5 154111500 154111820 -45518330 - AluSp SINE Alu 0 313 1 2148 78 11 7 chr5 154112318 154112647 -45517503 + AluSc SINE Alu 1 330 0 2676 153 4 60 chr5 154113020 154113351 -45516799 + ERVL LTR ERVL 2568 2865 -172 2351 96 7 3 chr5 154113351 154113653 -45516497 - AluSq SINE Alu -7 306 4 2676 153 4 60 chr5 154113653 154113805 -45516345 + ERVL LTR ERVL 2865 3024 -13 3048 209 15 2 chr5 154113805 154114354 -45515796 + MER68 LTR ERV1 6 561 -1 3975 316 89 57 chr5 154114403 154115479 -45514671 + ERVL LTR ERVL 2260 3300 -2464 2191 147 76 27 chr5 154115479 154115887 -45514263 - MSTA LTR MaLR 0 428 1 3975 316 89 57 chr5 154115887 154117698 -45512452 + ERVL LTR ERVL 3300 5241 -523 288 111 0 0 chr5 154117843 154117888 -45512262 + (TC)n Simple_repeat Simple_repeat 1 45 0 234 150 0 0 chr5 154117887 154117927 -45512223 + (CA)n Simple_repeat Simple_repeat 1 40 0 * 1631 162 68 7 chr5 154118563 154118841 -45511309 - AluJb SINE Alu -17 295 1 1913 160 0 3 chr5 154118968 154119287 -45510863 + AluSx SINE Alu 1 318 0 1629 174 28 13 chr5 154119427 154119744 -45510406 + L1MB4 LINE L1 5859 6180 0 1247 180 0 5 chr5 154119770 154119976 -45510174 - AluJo SINE Alu -23 289 85 310 243 28 28 chr5 154120071 154120215 -45509935 + L1MCa LINE L1 1729 1872 -4554 618 266 74 5 chr5 154120221 154120424 -45509726 - MIR SINE MIR -1 261 45 2163 108 44 0 chr5 154120566 154120861 -45509289 + AluSx SINE Alu 1 308 -4 2317 103 0 0 chr5 154121155 154121457 -45508693 + AluSc SINE Alu 1 302 -7 3407 157 72 69 chr5 154122244 154123036 -45507114 - LTR25 LTR ERV1 0 794 1 2104 93 18 4 chr5 154123759 154124039 -45506111 + AluSx SINE Alu 27 310 -2 2208 116 0 0 chr5 154126011 154126305 -45503845 + AluSq SINE Alu 1 294 -19 221 171 0 0 chr5 154126306 154126347 -45503803 + (TA)n Simple_repeat Simple_repeat 2 42 0 189 0 0 0 chr5 154126347 154126368 -45503782 + (GA)n Simple_repeat Simple_repeat 1 21 0 2360 93 0 0 chr5 154126461 154126761 -45503389 + AluSx SINE Alu 1 300 -12 1843 130 23 3 chr5 154128493 154128793 -45501357 + AluJo SINE Alu 1 306 -6 1800 150 19 32 chr5 154128900 154129214 -45500936 - AluJo SINE Alu -2 310 1 680 183 0 38 chr5 154129341 154129472 -45500678 + FLAM_C SINE Alu 2 127 -16 3818 151 8 8 chr5 154129489 154130123 -45500027 + MER41B LTR ERV1 1 634 -1 3666 147 11 28 chr5 154130542 154130706 -45499444 + L1PB4 LINE L1 5525 5690 -466 1430 188 62 4 chr5 154130706 154130982 -45499168 + AluJo SINE Alu 2 293 -19 3666 147 11 28 chr5 154130982 154131457 -45498693 + L1PB4 LINE L1 5690 6153 -3 272 138 185 15 chr5 154131687 154131752 -45498398 - HAL1 LINE L1 -1620 887 812 22 0 0 0 chr5 154131772 154131794 -45498356 + AT_rich Low_complexity Low_complexity 1 22 0 680 286 102 85 chr5 154131794 154132538 -45497612 - HAL1 LINE L1 -1685 822 66 1718 191 4 0 chr5 154132708 154132981 -45497169 - AluJb SINE Alu -38 274 1 27 0 0 0 chr5 154133299 154133326 -45496824 + AT_rich Low_complexity Low_complexity 1 27 0 261 91 0 0 chr5 154133429 154133462 -45496688 + Alu SINE Alu 242 274 -28 3845 179 96 21 chr5 154133582 154134385 -45495765 - MER21B LTR ERV1 0 863 1 455 190 0 52 chr5 154134603 154134719 -45495431 - MLT1F LTR MaLR -1 541 432 6752 37 14 2 chr5 154134741 154135544 -45494606 - L1PA5 LINE L1 0 6154 5343 295 197 66 0 chr5 154135550 154135611 -45494539 - MLT1F-int LTR MaLR -1298 73 9 2593 200 28 15 chr5 154135624 154136159 -45493991 - MLT1F LTR MaLR 0 542 1 2198 121 0 3 chr5 154136986 154137284 -45492866 - AluSx SINE Alu -15 297 1 2158 145 0 0 chr5 154137610 154137921 -45492229 - AluSx SINE Alu -1 311 1 215 352 63 14 chr5 154138687 154138829 -45491321 - L2 LINE L2 -246 3067 2919 637 220 31 52 chr5 154139102 154139293 -45490857 - MIR SINE MIR -25 237 51 243 0 0 0 chr5 154139536 154139563 -45490587 + (CA)n Simple_repeat Simple_repeat 1 27 0 195 281 133 62 chr5 154139672 154139800 -45490350 - L2 LINE L2 -218 3054 2918 272 353 162 49 chr5 154139859 154140291 -45489859 - L2 LINE L2 -468 2846 2336 2088 119 10 10 chr5 154140291 154140585 -45489565 - AluSq SINE Alu -19 294 1 272 353 162 49 chr5 154140585 154140707 -45489443 - L2 LINE L2 -978 2336 2229 2374 85 0 0 chr5 154141078 154141372 -45488778 + AluSc SINE Alu 1 294 -15 2248 111 3 0 chr5 154141530 154141827 -45488323 + AluSq SINE Alu 1 298 -15 2364 71 0 17 chr5 154141829 154142126 -45488024 + AluY SINE Alu 1 292 -19 2007 144 3 0 chr5 154145533 154145831 -45484319 - AluSx SINE Alu -13 299 1 262 252 122 9 chr5 154146362 154146469 -45483681 + L2 LINE L2 3194 3312 -1 182 319 77 0 chr5 154146789 154146880 -45483270 - L3 LINE CR1 -1336 241 144 2320 93 0 32 chr5 154147269 154147404 -45482746 + AluSq SINE Alu 2 140 -173 2479 78 3 0 chr5 154147404 154147712 -45482438 + AluY SINE Alu 1 309 -2 2320 93 0 32 chr5 154147712 154147889 -45482261 + AluSq SINE Alu 140 304 -9 1422 154 58 62 chr5 154148562 154148887 -45481263 - MER33 DNA MER1_type 0 324 1 1171 145 34 0 chr5 154149228 154149407 -45480743 + MER20 DNA MER1_type 35 219 0 276 278 86 20 chr5 154149433 154149584 -45480566 - MLT1L LTR MaLR -414 201 41 2074 136 0 0 chr5 154149940 154150242 -45479908 + AluSx SINE Alu 1 302 -10 882 159 25 6 chr5 154151307 154151464 -45478686 + FAM SINE Alu 16 175 -10 801 130 32 0 chr5 154153110 154153233 -45476917 - AluSq/x SINE Alu -178 134 8 201 74 0 0 chr5 154154734 154154761 -45475389 + (A)n Simple_repeat Simple_repeat 1 27 0 699 203 98 0 chr5 154157969 154158112 -45472038 - FRAM SINE Alu -7 159 3 433 238 0 0 chr5 154158608 154158692 -45471458 + FRAM/FAM SINE Alu 1 84 -101 * 806 188 41 0 chr5 154158687 154158731 -45471419 + AluJb SINE Alu 130 171 -141 261 57 0 0 chr5 154158731 154158766 -45471384 + (CGGGG)n Simple_repeat Simple_repeat 2 36 0 806 188 41 0 chr5 154158766 154158891 -45471259 + AluJb SINE Alu 171 306 -6 326 354 109 16 chr5 154159483 154159794 -45470356 + L1M4 LINE L1 2147 2486 -3660 664 211 16 0 chr5 154160500 154160672 -45469478 + FLAM_A SINE Alu 1 174 0 4962 164 24 28 chr5 154160843 154162042 -45468108 + L1MB3 LINE L1 4966 6147 -36 321 327 77 77 chr5 154162166 154162582 -45467568 + L2 LINE L2 2855 3270 -2 193 380 114 24 chr5 154165897 154166063 -45464087 + MIR3 SINE MIR 21 201 -7 295 322 161 31 chr5 154167227 154167488 -45462662 + L2 LINE L2 2974 3268 -4 456 285 175 20 chr5 154170814 154171168 -45458982 + MLT1I LTR MaLR 1 409 0 662 199 13 0 chr5 154171262 154171413 -45458737 + CT-rich Low_complexity Low_complexity 3 155 0 1625 158 36 7 chr5 154171415 154171718 -45458432 - AluJb SINE Alu 0 312 1 2004 128 3 0 chr5 154171769 154172065 -45458085 + AluSx SINE Alu 1 297 -15 391 198 16 11 chr5 154172575 154172676 -45457474 + FLAM_A SINE Alu 53 125 -8 1587 154 29 4 chr5 154173347 154173627 -45456523 - AluSx SINE Alu -25 287 1 22 0 0 0 chr5 154173969 154173991 -45456159 + AT_rich Low_complexity Low_complexity 1 22 0 1789 144 13 3 chr5 154176971 154177270 -45452880 + AluSx SINE Alu 1 302 -10 205 134 24 85 chr5 154177597 154177679 -45452471 + (TTAA)n Simple_repeat Simple_repeat 2 78 0 295 302 66 9 chr5 154177844 154178056 -45452094 - L1ME LINE L1 -334 5787 5564 1790 144 3 3 chr5 154182172 154182484 -45447666 + AluSx SINE Alu 2 313 0 454 240 101 34 chr5 154183769 154183977 -45446173 + L1MC4a LINE L1 5785 6006 -1802 21 0 0 0 chr5 154191137 154191158 -45438992 + AT_rich Low_complexity Low_complexity 1 21 0 2305 43 4 0 chr5 154191520 154191838 -45438312 + AluY SINE Alu 1 319 0 310 229 94 31 chr5 154192602 154192698 -45437452 - L1MCa LINE L1 -4359 2067 1966 27 0 0 0 chr5 154193499 154193526 -45436624 + AT_rich Low_complexity Low_complexity 1 27 0 727 175 32 0 chr5 154193652 154193778 -45436372 + FLAM_C SINE Alu 1 130 -3 887 161 0 0 chr5 154197650 154197793 -45432357 + FRAM SINE Alu 11 153 -23 2741 7 0 3 chr5 154200940 154201250 -45428900 - AluYb8 SINE Alu -9 309 1 1419 170 38 38 chr5 154201593 154201882 -45428268 + AluJo SINE Alu 7 295 -17 801 78 35 0 chr5 154202175 154202291 -45427859 + LTR56 LTR ERV1 320 439 -6 2197 87 0 0 chr5 154202506 154202792 -45427358 + AluSg SINE Alu 1 286 -24 238 347 94 40 chr5 154202870 154203294 -45426856 + L3 LINE CR1 1129 1575 -2 2198 110 7 0 chr5 154204153 154204463 -45425687 - AluSx SINE Alu 0 312 1 182 274 51 134 chr5 154205980 154206080 -45424070 + MIR3 SINE MIR 31 115 -93 2348 74 6 0 chr5 154206080 154206391 -45423759 - AluSp SINE Alu 0 313 1 182 274 51 134 chr5 154206391 154206447 -45423703 + MIR3 SINE MIR 115 174 -34 509 272 16 0 chr5 154210660 154210785 -45419365 + FLAM_A SINE Alu 1 127 -6 346 67 0 0 chr5 154210859 154210904 -45419246 - Alu SINE Alu -8 293 249 249 33 0 0 chr5 154215122 154215152 -45414998 + (TG)n Simple_repeat Simple_repeat 1 30 0 1087 163 5 0 chr5 154215567 154215763 -45414387 - AluJo SINE Alu -3 309 113 444 19 0 0 chr5 154219802 154219855 -45410295 + (TG)n Simple_repeat Simple_repeat 2 54 0 815 203 0 6 chr5 154220433 154220591 -45409559 + FRAM SINE Alu 1 154 -22 2269 84 0 3 chr5 154220600 154220897 -45409253 + AluSx SINE Alu 1 296 -16 218 333 70 9 chr5 154221809 154221923 -45408227 + L2 LINE L2 3192 3312 -1 2165 93 7 0 chr5 154225325 154225645 -45404505 + AluSq SINE Alu 1 322 0 25 51 0 0 chr5 154226444 154226483 -45403667 + AT_rich Low_complexity Low_complexity 1 39 0 24 91 0 0 chr5 154226550 154226616 -45403534 + AT_rich Low_complexity Low_complexity 1 66 0 1636 111 0 159 chr5 154229671 154230041 -45400109 - AluYa5 SINE Alu 0 311 1 720 187 0 22 chr5 154230336 154230475 -45399675 - AluJo SINE Alu -15 297 162 404 188 200 0 chr5 154230494 154230579 -45399571 - AluJo SINE Alu -199 103 2 462 166 103 28 chr5 154231885 154232030 -45398120 + L1MC5 LINE L1 7754 7909 -52 21 0 0 0 chr5 154232488 154232509 -45397641 + GC_rich Low_complexity Low_complexity 1 21 0 1960 105 14 7 chr5 154235107 154235402 -45394748 - AluSg SINE Alu -2 308 12 1452 164 3 48 chr5 154235554 154235864 -45394286 + AluJb SINE Alu 4 299 -13 1375 150 93 0 chr5 154235886 154236133 -45394017 + AluJo SINE Alu 23 292 -20 288 0 0 0 chr5 154240004 154240036 -45390114 + (T)n Simple_repeat Simple_repeat 1 32 0 21 36 0 0 chr5 154241338 154241366 -45388784 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 154242145 154242166 -45387984 + GC_rich Low_complexity Low_complexity 1 21 0 2435 58 3 0 chr5 154253124 154253417 -45376733 - AluY SINE Alu -17 294 1 324 0 0 0 chr5 154253433 154253469 -45376681 + (CA)n Simple_repeat Simple_repeat 2 37 0 619 191 0 73 chr5 154253641 154253777 -45376373 - FLAM_A SINE Alu -7 126 1 27 0 0 0 chr5 154253915 154253942 -45376208 + AT_rich Low_complexity Low_complexity 1 27 0 1336 170 105 18 chr5 154257465 154257614 -45372536 - AluJo SINE Alu -11 301 166 441 54 0 0 chr5 154257614 154257670 -45372480 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 1336 170 105 18 chr5 154257670 154257797 -45372353 - AluJo SINE Alu -146 166 1 2454 86 0 3 chr5 154257817 154258119 -45372031 + AluSp SINE Alu 1 301 -12 1107 213 55 3 chr5 154258120 154258411 -45371739 - L1MC4 LINE L1 -801 7241 6936 3341 98 0 5 chr5 154258597 154259036 -45371114 + MER9 LTR ERVK 1 437 -74 21 0 0 0 chr5 154259036 154259057 -45371093 + AT_rich Low_complexity Low_complexity 1 21 0 33 43 0 0 chr5 154259183 154259230 -45370920 + AT_rich Low_complexity Low_complexity 1 47 0 271 272 163 0 chr5 154260769 154260861 -45369289 + MIR SINE MIR 74 180 -82 2186 114 0 17 chr5 154262005 154262304 -45367846 - AluSc SINE Alu -15 294 1 291 114 0 0 chr5 154262833 154262877 -45367273 + (TA)n Simple_repeat Simple_repeat 2 45 0 230 190 0 0 chr5 154262877 154262935 -45367215 - L1MC4 LINE L1 -1339 6703 6646 2128 104 0 17 chr5 154262942 154263229 -45366921 - AluSx SINE Alu -30 282 1 1147 87 13 0 chr5 154263320 154263469 -45366681 + AluSg/x SINE Alu 147 297 -15 1978 101 75 0 chr5 154264450 154264718 -45365432 + AluSg SINE Alu 1 288 -22 1591 189 0 18 chr5 154267484 154267769 -45362381 + AluJb SINE Alu 23 302 -10 2532 80 3 0 chr5 154268422 154268734 -45361416 - AluSp SINE Alu 0 313 1 678 228 98 63 chr5 154268856 154269110 -45361040 - L1M4 LINE L1 -1150 4996 4734 895 213 23 61 chr5 154269120 154269430 -45360720 - L1M4 LINE L1 -1519 4627 4330 600 329 73 58 chr5 154269639 154270420 -45359730 - L2 LINE L2 0 3272 2482 276 246 56 87 chr5 154270410 154270536 -45359614 + L2 LINE L2 3192 3313 0 * 322 356 72 0 chr5 154270556 154270736 -45359414 - L2 LINE L2 -842 2472 2280 2206 87 31 3 chr5 154270743 154271030 -45359120 - AluSg SINE Alu -15 295 1 2269 94 10 3 chr5 154271391 154271699 -45358451 - AluSx SINE Alu 0 312 3 497 159 80 18 chr5 154271928 154272041 -45358109 + L1ME2 LINE L1 6037 6156 -8 2395 103 0 6 chr5 154272067 154272378 -45357772 + AluSq SINE Alu 1 309 -4 703 224 132 66 chr5 154272603 154272922 -45357228 - L1MC4a LINE L1 -1618 6190 5893 2379 32 0 18 chr5 154272922 154273201 -45356949 + AluY SINE Alu 1 274 -37 183 42 0 0 chr5 154273207 154273231 -45356919 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 703 224 132 66 chr5 154273231 154273314 -45356836 - L1MC4a LINE L1 -1919 5889 5754 462 217 33 50 chr5 154273326 154273446 -45356704 - L1MC4a LINE L1 -2109 5699 5582 425 191 39 1 chr5 154273459 154273548 -45356602 - L1MC4 LINE L1 0 8042 6265 2072 113 62 0 chr5 154273588 154273879 -45356271 + AluSx SINE Alu 1 309 -3 183 129 0 0 chr5 154273928 154273959 -45356191 + (TATG)n Simple_repeat Simple_repeat 3 33 0 1210 226 38 45 chr5 154273998 154274270 -45355880 - L1MC4 LINE L1 -135 7907 7638 2148 114 16 36 chr5 154274270 154274576 -45355574 - AluSx SINE Alu -12 300 1 1210 226 38 45 chr5 154274576 154274723 -45355427 - L1MC4 LINE L1 -404 7638 7491 2209 106 0 0 chr5 154274734 154275048 -45355102 - AluSq SINE Alu 0 316 3 33 0 0 0 chr5 154275060 154275093 -45355057 + AT_rich Low_complexity Low_complexity 1 33 0 2283 97 0 17 chr5 154275093 154275391 -45354759 - AluSg SINE Alu -17 293 1 1575 201 97 104 chr5 154275427 154275861 -45354289 - MLT1E LTR MaLR 0 593 137 1787 176 10 0 chr5 154275863 154276152 -45353998 + AluSx SINE Alu 1 292 -20 261 98 0 0 chr5 154276162 154276203 -45353947 + (GGGA)n Simple_repeat Simple_repeat 4 44 0 403 221 12 12 chr5 154276211 154276297 -45353853 - MLT1E LTR MaLR -418 149 64 2209 208 87 45 chr5 154276321 154276918 -45353232 - L1MC4a LINE L1 -743 7065 6444 282 190 35 0 chr5 154276918 154276976 -45353174 + Alu SINE Alu 241 300 -2 318 148 0 0 chr5 154276977 154277031 -45353119 + (GGGA)n Simple_repeat Simple_repeat 3 56 0 377 233 12 12 chr5 154277038 154277124 -45353026 - MLT1F1 LTR MaLR -418 149 64 288 123 0 108 chr5 154277124 154277189 -45352961 - L1MC4 LINE L1 -881 7161 7104 980 167 187 96 chr5 154277212 154277365 -45352785 - L1MC4a LINE L1 -1463 6345 6207 1584 173 48 4 chr5 154277365 154277547 -45352603 - AluJb SINE Alu 0 312 111 246 32 0 0 chr5 154277547 154277578 -45352572 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1584 173 48 4 chr5 154277578 154277695 -45352455 - AluJb SINE Alu -201 111 1 980 167 187 96 chr5 154277695 154277947 -45352203 - L1MC4a LINE L1 -1601 6207 5902 5106 161 50 31 chr5 154277947 154278669 -45351481 + Tigger6a DNA MER2_type 2 708 -889 2286 108 3 0 chr5 154278669 154278965 -45351185 - AluSp SINE Alu -12 301 5 5106 161 50 31 chr5 154278965 154279060 -45351090 + Tigger6a DNA MER2_type 708 800 -797 2655 38 0 16 chr5 154279060 154279373 -45350777 - AluY SINE Alu -1 310 3 5106 161 50 31 chr5 154279373 154279568 -45350582 + Tigger6a DNA MER2_type 800 1035 -48 3681 94 36 20 chr5 154279591 154280115 -45350035 - LTR9B LTR ERV1 -83 561 26 2338 41 0 7 chr5 154280115 154280438 -45349712 - AluY SINE Alu 0 311 23 3681 94 36 20 chr5 154280438 154280465 -45349685 - LTR9B LTR ERV1 -618 26 1 12290 106 17 18 chr5 154280466 154280946 -45349204 - HUERS-P3b LTR ERV1 -7 7411 6932 2215 74 14 3 chr5 154280946 154281255 -45348895 + AluSq SINE Alu 1 312 0 12290 106 17 18 chr5 154281255 154282485 -45347665 - HUERS-P3b LTR ERV1 -486 6932 5700 1286 142 15 0 chr5 154282505 154282702 -45347448 - LTR9B LTR ERV1 0 644 445 1157 135 6 0 chr5 154282829 154282999 -45347151 - AluSg/x SINE Alu -7 305 135 1812 167 3 3 chr5 154283009 154283296 -45346854 - AluJb SINE Alu -25 287 1 3560 219 37 27 chr5 154283307 154284191 -45345959 - L1ME2 LINE L1 -9 6224 5332 1203 105 0 0 chr5 154284193 154284346 -45345804 + AluSg/x SINE Alu 133 285 -25 1758 217 13 42 chr5 154284391 154284865 -45345285 - L1ME2 LINE L1 -874 5341 4882 342 194 20 10 chr5 154284987 154285085 -45345065 + (TA)n Simple_repeat Simple_repeat 1 99 0 745 93 0 0 chr5 154285087 154285184 -45344966 - L1PB2 LINE L1 -273 5878 5782 365 185 0 12 chr5 154285184 154285265 -45344885 + (TATATG)n Simple_repeat Simple_repeat 5 84 0 3658 113 4 2 chr5 154285265 154285832 -45344318 - L1PB2 LINE L1 -363 5791 5224 1290 197 21 49 chr5 154285836 154285927 -45344223 - L1ME2 LINE L1 -3180 3035 2943 2090 102 58 17 chr5 154285927 154286084 -45344066 - AluSq SINE Alu -6 307 158 2394 96 3 0 chr5 154286084 154286386 -45343764 - AluSp SINE Alu -10 303 1 2090 102 58 17 chr5 154286386 154286523 -45343627 - AluSq SINE Alu -155 158 1 1290 197 21 49 chr5 154286523 154286817 -45343333 - L1ME2 LINE L1 -3272 2943 2661 * 1819 294 74 37 chr5 154286791 154287702 -45342448 - L1ME2 LINE L1 -5274 1122 165 2450 65 16 10 chr5 154287702 154288009 -45342141 - AluY SINE Alu -2 309 1 1819 294 74 37 chr5 154288009 154288147 -45342003 - L1ME2 LINE L1 -6231 165 34 1508 222 73 54 chr5 154288147 154288249 -45341901 - L1MC4a LINE L1 -1918 5890 5791 2411 95 3 0 chr5 154288249 154288554 -45341596 + AluSx SINE Alu 3 308 -4 1508 222 73 54 chr5 154288554 154288666 -45341484 - L1MC4a LINE L1 -2017 5791 5683 222 62 0 0 chr5 154288666 154288698 -45341452 + (TA)n Simple_repeat Simple_repeat 2 33 0 1508 222 73 54 chr5 154288698 154289004 -45341146 - L1MC4a LINE L1 -2125 5683 5359 1303 156 0 19 chr5 154289005 154289216 -45340934 - AluJo SINE Alu -16 296 90 207 0 0 0 chr5 154290365 154290388 -45339762 + (T)n Simple_repeat Simple_repeat 1 23 0 1189 138 0 43 chr5 154290668 154290878 -45339272 - AluJb SINE Alu -26 286 86 366 273 82 45 chr5 154291093 154291156 -45338994 - L1MC4a LINE L1 -327 5794 5735 1632 107 0 14 chr5 154291156 154291410 -45338740 + AluSc SINE Alu 66 316 0 366 273 82 45 chr5 154291410 154291593 -45338557 - L1MC4a LINE L1 -386 5735 5625 198 0 0 0 chr5 154295495 154295517 -45334633 + (T)n Simple_repeat Simple_repeat 1 22 0 541 239 58 53 chr5 154296038 154296226 -45333924 + MIR3 SINE MIR 5 193 -15 256 273 105 87 chr5 154296905 154296984 -45333166 - MIR3 SINE MIR -23 185 109 1764 80 0 0 chr5 154296984 154297197 -45332953 + AluY SINE Alu 89 301 -10 256 273 105 87 chr5 154297197 154297289 -45332861 - MIR3 SINE MIR -99 109 11 2013 163 139 0 chr5 154297412 154297786 -45332364 - MSTB LTR MaLR 0 426 1 1731 158 34 10 chr5 154299274 154299565 -45330585 + AluJb SINE Alu 1 298 -14 1316 177 39 18 chr5 154299784 154300066 -45330084 - L1MB7 LINE L1 -19 6165 5878 22 0 0 0 chr5 154304751 154304773 -45325377 + GC_rich Low_complexity Low_complexity 1 22 0 920 255 32 16 chr5 154307318 154307565 -45322585 + MIR SINE MIR 12 262 0 187 277 71 54 chr5 154307623 154307735 -45322415 + L2 LINE L2 3137 3250 -22 1385 101 6 0 chr5 154307802 154307980 -45322170 - AluSg/x SINE Alu -11 301 123 449 287 47 20 chr5 154307982 154308132 -45322018 - MIR SINE MIR -6 256 103 290 212 35 24 chr5 154308356 154308441 -45321709 - MIR3 SINE MIR -15 193 108 243 171 0 0 chr5 154308459 154308500 -45321650 + MER5A DNA MER1_type 38 78 -111 308 212 30 61 chr5 154309638 154309737 -45320413 + MIR3 SINE MIR 61 156 -52 938 146 21 36 chr5 154310698 154310890 -45319260 + MER53 DNA DNA 1 189 0 320 308 138 0 chr5 154310992 154311151 -45318999 + MIR SINE MIR 11 191 -71 434 264 139 28 chr5 154311412 154311628 -45318522 - MIR SINE MIR -1 261 22 2219 98 20 7 chr5 154311628 154311925 -45318225 - AluSg SINE Alu -9 301 1 607 286 85 13 chr5 154312146 154312370 -45317780 - MIR SINE MIR -12 250 11 1625 116 0 0 chr5 154312916 154313132 -45317018 - AluSg/x SINE Alu -14 296 81 184 239 0 0 chr5 154314022 154314068 -45316082 + L2 LINE L2 3268 3313 0 2386 97 0 13 chr5 154314467 154314775 -45315375 - AluSg SINE Alu -2 308 5 338 324 19 0 chr5 154314776 154314884 -45315266 - L2 LINE L2 -9 3263 3154 1587 98 73 45 chr5 154314981 154315227 -45314923 + AluSc SINE Alu 41 293 -16 1277 266 125 35 chr5 154315318 154315926 -45314224 + L1MC4 LINE L1 7113 7775 -267 506 308 36 36 chr5 154316323 154316570 -45313580 - MIR SINE MIR -14 248 2 342 0 0 0 chr5 154316759 154316797 -45313353 + (TG)n Simple_repeat Simple_repeat 2 39 0 2383 73 7 0 chr5 154316921 154317210 -45312940 + AluSc SINE Alu 1 291 -18 445 217 100 92 chr5 154317224 154317473 -45312677 + L1ME4a LINE L1 5707 5957 -164 2439 55 0 3 chr5 154317579 154317911 -45312239 + AluY SINE Alu 1 311 0 252 213 19 93 chr5 154317979 154318087 -45312063 + L1MC5 LINE L1 7456 7555 -406 2125 124 27 3 chr5 154318100 154318398 -45311752 + AluSx SINE Alu 1 305 -7 666 184 81 17 chr5 154318425 154318599 -45311551 + L1MC5 LINE L1 7739 7923 -38 306 304 88 0 chr5 154318604 154318706 -45311444 + HAL1b LINE L1 1235 1345 -3 564 89 0 0 chr5 154319048 154319127 -45311023 + (TTCC)n Simple_repeat Simple_repeat 2 80 0 2354 103 0 3 chr5 154319133 154319434 -45310716 - AluSx SINE Alu -12 300 1 197 264 64 56 chr5 154319641 154319766 -45310384 + L2 LINE L2 2852 2977 -337 432 277 130 108 chr5 154319863 154320170 -45309980 + L2 LINE L2 2958 3271 -1 2089 125 17 3 chr5 154320248 154320543 -45309607 + AluSx SINE Alu 1 299 -13 447 247 32 138 chr5 154320827 154320940 -45309210 + L2 LINE L2 3019 3142 -130 1788 108 12 12 chr5 154320940 154321180 -45308970 - AluSq SINE Alu -73 240 1 447 247 32 138 chr5 154321180 154321349 -45308801 + L2 LINE L2 3142 3271 -1 341 144 24 60 chr5 154322045 154322212 -45307938 + (CAGAGA)n Simple_repeat Simple_repeat 2 162 0 222 246 31 0 chr5 154322288 154322353 -45307797 + GA-rich Low_complexity Low_complexity 5 71 0 338 244 0 83 chr5 154322440 154322683 -45307467 + (CAGAGA)n Simple_repeat Simple_repeat 1 222 0 379 247 216 16 chr5 154324731 154324921 -45305229 + MIR SINE MIR 18 245 -17 237 33 0 0 chr5 154334414 154334444 -45295706 + (CA)n Simple_repeat Simple_repeat 2 31 0 619 317 69 58 chr5 154334516 154334964 -45295186 + L2 LINE L2 2397 2849 -465 2070 122 0 43 chr5 154334990 154335294 -45294856 - AluSx SINE Alu -21 291 1 252 309 141 63 chr5 154335372 154335641 -45294509 + L2 LINE L2 2965 3254 -18 181 186 47 0 chr5 154335608 154335651 -45294499 + MIR SINE MIR 216 260 -2 * 427 284 142 0 chr5 154335670 154335832 -45294318 - MIR SINE MIR -6 256 72 808 210 0 30 chr5 154335978 154336145 -45294005 - AluJo SINE Alu -4 298 137 1814 53 145 0 chr5 154336150 154336412 -45293738 - AluSg SINE Alu 0 300 1 712 196 0 0 chr5 154336415 154336548 -45293602 - AluJo SINE Alu -169 133 1 562 184 0 83 chr5 154336561 154336729 -45293421 - L1MB8 LINE L1 -12 6166 6013 1853 132 0 45 chr5 154336996 154337283 -45292867 - AluSg SINE Alu 0 310 37 894 174 24 0 chr5 154337285 154337452 -45292698 - MER5B DNA MER1_type -2 176 6 1624 174 0 40 chr5 154337658 154337934 -45292216 - AluJb SINE Alu -19 293 29 500 283 102 17 chr5 154337939 154338116 -45292034 - MIR SINE MIR -8 254 63 213 39 0 0 chr5 154338430 154338456 -45291694 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1730 180 3 39 chr5 154338457 154338768 -45291382 - 7SLRNA srpRNA srpRNA -20 300 1 247 178 129 10 chr5 154338828 154338929 -45291221 + L1ME4a LINE L1 5997 6109 -12 205 86 29 0 chr5 154343243 154343278 -45286872 + MIR SINE MIR 218 253 -9 431 262 215 0 chr5 154343645 154343794 -45286356 + MER5A DNA MER1_type 9 189 0 183 42 0 0 chr5 154343969 154343993 -45286157 + (TTG)n Simple_repeat Simple_repeat 2 25 0 908 193 0 6 chr5 154343995 154344161 -45285989 - FRAM SINE Alu -1 165 1 547 313 40 103 chr5 154344347 154344775 -45285375 + L2 LINE L2 2851 3251 -21 2291 98 23 3 chr5 154345035 154345380 -45284770 - AluSp SINE Alu 0 351 1 2301 89 3 0 chr5 154345531 154345824 -45284326 - AluY SINE Alu -17 294 1 263 327 39 19 chr5 154345850 154346006 -45284144 + MIR SINE MIR 3 161 -101 683 252 153 8 chr5 154346056 154346318 -45283832 - L1ME1 LINE L1 -20 6146 5847 422 326 105 26 chr5 154346329 154346672 -45283478 + L2 LINE L2 2371 2740 -574 576 189 5 189 chr5 154346678 154346733 -45283417 - MER45A DNA AcHobo -1404 177 114 2212 109 3 10 chr5 154346733 154347037 -45283113 + AluSx SINE Alu 1 302 -10 576 189 5 189 chr5 154347037 154347067 -45283083 - MER45A DNA AcHobo -1467 114 80 1683 141 31 91 chr5 154347067 154347386 -45282764 + AluJo SINE Alu 1 300 -12 576 189 5 189 chr5 154347386 154347516 -45282634 - MER45A DNA AcHobo -1501 80 1 2031 145 7 0 chr5 154347946 154348235 -45281915 - AluSx SINE Alu -21 291 1 478 266 7 0 chr5 154348283 154348422 -45281728 - L1ME1 LINE L1 -2083 5725 5586 2366 96 0 0 chr5 154348466 154348789 -45281361 - AluSc SINE Alu 0 323 1 1976 145 7 7 chr5 154348791 154349088 -45281062 - AluJo SINE Alu -14 298 2 2530 49 0 0 chr5 154349195 154349499 -45280651 - AluY SINE Alu 0 304 1 2392 107 0 16 chr5 154349723 154350041 -45280109 - AluSq SINE Alu 0 313 1 1873 158 14 3 chr5 154350125 154350417 -45279733 + AluJb SINE Alu 1 295 -17 459 330 14 43 chr5 154350445 154350731 -45279419 + L1MC4a LINE L1 4860 5132 -1014 2306 119 0 0 chr5 154350731 154351033 -45279117 + AluSx SINE Alu 1 302 -10 459 330 14 43 chr5 154351033 154351167 -45278983 + L1MC4a LINE L1 5132 5268 -878 7624 112 26 38 chr5 154351167 154351750 -45278400 + HSMAR2 DNA Mariner 1 590 -712 971 189 0 0 chr5 154351750 154351914 -45278236 + FRAM SINE Alu 2 165 -1 7624 112 26 38 chr5 154351914 154351952 -45278198 + HSMAR2 DNA Mariner 590 627 -675 2283 93 0 0 chr5 154351952 154352243 -45277907 - AluY SINE Alu -20 291 1 7624 112 26 38 chr5 154352243 154352937 -45277213 + HSMAR2 DNA Mariner 627 1301 -1 1433 218 64 71 chr5 154352983 154353050 -45277100 + L1MC4a LINE L1 5304 5370 -2438 1851 161 0 14 chr5 154353050 154353342 -45276808 + AluJo SINE Alu 9 296 -16 1433 218 64 71 chr5 154353342 154353649 -45276501 + L1MC4a LINE L1 5370 5678 -2130 222 62 0 0 chr5 154353649 154353681 -45276469 + (TA)n Simple_repeat Simple_repeat 2 33 0 1433 218 64 71 chr5 154353681 154353793 -45276357 + L1MC4a LINE L1 5678 5789 -2019 2395 95 3 0 chr5 154353793 154354098 -45276052 - AluSx SINE Alu -4 308 3 1433 218 64 71 chr5 154354098 154354200 -45275950 + L1MC4a LINE L1 5789 5890 -1918 1534 297 61 38 chr5 154354243 154354338 -45275812 + L1ME1 LINE L1 93 184 -6212 2419 65 16 10 chr5 154354338 154354645 -45275505 + AluY SINE Alu 1 309 -2 1534 297 61 38 chr5 154354645 154355556 -45274594 + L1ME1 LINE L1 184 1122 -5274 1158 212 18 47 chr5 154355530 154355824 -45274326 + L1ME1 LINE L1 2661 2943 -3272 * 2076 102 58 17 chr5 154355824 154355961 -45274189 + AluSq SINE Alu 1 131 -182 2376 96 3 0 chr5 154355961 154356263 -45273887 + AluSp SINE Alu 1 303 -10 2076 102 58 17 chr5 154356263 154356420 -45273730 + AluSq SINE Alu 131 307 -6 1158 212 18 47 chr5 154356420 154356511 -45273639 + L1ME1 LINE L1 2943 3035 -3180 3409 113 4 2 chr5 154356515 154357082 -45273068 + L1PB2 LINE L1 5224 5791 -363 365 185 0 12 chr5 154357082 154357163 -45272987 + (CATATA)n Simple_repeat Simple_repeat 5 84 0 692 93 0 0 chr5 154357163 154357260 -45272890 + L1PB2 LINE L1 5782 5878 -273 342 194 20 10 chr5 154357262 154357360 -45272790 + (TA)n Simple_repeat Simple_repeat 1 99 0 1596 216 13 42 chr5 154357484 154357956 -45272194 + L1ME1 LINE L1 4884 5341 -874 1186 105 0 0 chr5 154358001 154358154 -45271996 - AluSg/x SINE Alu -25 287 135 3261 227 22 19 chr5 154358216 154359041 -45271109 + L1ME1 LINE L1 5402 6228 -7 1807 167 3 3 chr5 154359051 154359338 -45270812 + AluJb SINE Alu 1 287 -25 1281 118 0 0 chr5 154359348 154359517 -45270633 + AluSg/x SINE Alu 135 303 -9 2411 213 56 13 chr5 154359539 154360165 -45269985 + L1ME1 LINE L1 5449 6101 -65 22 0 0 0 chr5 154413991 154414013 -45216137 + AT_rich Low_complexity Low_complexity 1 22 0 1794 167 27 3 chr5 154414249 154414549 -45215601 + AluJb SINE Alu 5 311 -1 428 219 76 17 chr5 154418177 154418296 -45211854 - L1MB8 LINE L1 -62 6116 5991 333 0 0 0 chr5 154418309 154418346 -45211804 + (TG)n Simple_repeat Simple_repeat 2 38 0 1441 204 7 4 chr5 154418798 154419072 -45211078 - AluJb SINE Alu -37 275 1 264 206 88 59 chr5 154419077 154419179 -45210971 + MIR SINE MIR 107 211 -51 23 0 0 0 chr5 154419470 154419493 -45210657 + AT_rich Low_complexity Low_complexity 1 23 0 647 144 29 0 chr5 154422462 154422566 -45207584 + MIR SINE MIR 74 180 -82 267 231 13 39 chr5 154422534 154422612 -45207538 - MIR SINE MIR -84 178 103 * 492 229 159 70 chr5 154422912 154423366 -45206784 - L1MC5 LINE L1 -32 7929 7436 21 71 0 0 chr5 154423520 154423562 -45206588 + AT_rich Low_complexity Low_complexity 1 42 0 334 297 94 25 chr5 154424130 154424332 -45205818 + MIR SINE MIR 1 216 -46 254 218 77 26 chr5 154428310 154428388 -45201762 - L1P LINE L1 -2478 3668 3587 331 285 95 15 chr5 154428717 154428854 -45201296 - HAL1 LINE L1 -4 2503 2356 573 266 171 20 chr5 154428986 154429343 -45200807 - HAL1 LINE L1 -407 2100 1690 2775 287 71 16 chr5 154429429 154430603 -45199547 - HAL1 LINE L1 -638 1869 632 1049 283 45 50 chr5 154430663 154430744 -45199406 - MLT1I LTR MaLR -8 401 321 1841 62 13 0 chr5 154430744 154430968 -45199182 + AluY SINE Alu 83 309 -2 1049 283 45 50 chr5 154430968 154431289 -45198861 - MLT1I LTR MaLR -88 321 1 693 252 87 85 chr5 154431393 154431842 -45198308 - HAL1 LINE L1 -2028 479 30 308 254 53 26 chr5 154431884 154431998 -45198152 - L1M4 LINE L1 -2931 3215 3099 841 292 65 19 chr5 154432200 154432640 -45197510 - MLT1J LTR MaLR -19 492 1 23 0 0 0 chr5 154432903 154432926 -45197224 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 154433901 154433929 -45196221 + AT_rich Low_complexity Low_complexity 1 28 0 1646 175 3 106 chr5 154434025 154434413 -45195737 + MER7A DNA MER2_type 1 346 0 398 326 70 32 chr5 154435087 154435125 -45195025 + L1MEd LINE L1 446 481 -5638 282 29 0 0 chr5 154435125 154435160 -45194990 + (TG)n Simple_repeat Simple_repeat 2 36 0 683 217 0 0 chr5 154435163 154435278 -45194872 - FLAM_A SINE Alu -18 115 1 398 326 70 32 chr5 154435278 154435609 -45194541 + L1MEd LINE L1 482 833 -5286 948 249 122 33 chr5 154435655 154436016 -45194134 + HAL1b LINE L1 253 645 -703 359 303 180 0 chr5 154436053 154436264 -45193886 + HAL1b LINE L1 460 708 -640 285 256 45 102 chr5 154436275 154436451 -45193699 + HAL1 LINE L1 24 189 -2318 680 326 92 27 chr5 154436554 154437033 -45193117 + HAL1 LINE L1 319 828 -1679 * 4977 161 40 16 chr5 154437028 154437046 -45193104 + L1MB7 LINE L1 5119 5135 -1049 2403 82 0 3 chr5 154437046 154437340 -45192810 + AluSx SINE Alu 3 295 -17 4977 161 40 16 chr5 154437340 154438369 -45191781 + L1MB7 LINE L1 5135 6183 -1 485 286 112 36 chr5 154438374 154438766 -45191384 + HAL1 LINE L1 1022 1443 -1064 340 122 0 204 chr5 154438805 154438903 -45191247 - MER20 DNA MER1_type -138 81 4 886 277 182 31 chr5 154438952 154439720 -45190430 + HAL1 LINE L1 1515 2398 -109 25 0 0 0 chr5 154439747 154439772 -45190378 + AT_rich Low_complexity Low_complexity 1 25 0 2262 87 3 0 chr5 154439780 154440069 -45190081 + AluSq SINE Alu 1 290 -23 302 226 298 29 chr5 154440080 154440545 -45189605 + HAL1b LINE L1 732 1335 -13 2240 106 0 3 chr5 154440545 154440848 -45189302 - AluSx SINE Alu -2 310 9 302 226 298 29 chr5 154440848 154440868 -45189282 + HAL1b LINE L1 1335 1348 0 243 290 140 0 chr5 154444430 154444537 -45185613 - L2 LINE L2 0 3313 3192 2089 136 0 3 chr5 154444689 154444991 -45185159 - AluSx SINE Alu -11 301 1 2281 127 0 0 chr5 154445087 154445387 -45184763 + AluSx SINE Alu 1 300 -12 2161 115 7 0 chr5 154445814 154446109 -45184041 + AluSq SINE Alu 1 297 -16 362 278 78 0 chr5 154451959 154452074 -45178076 - L1ME2 LINE L1 -10 6154 6031 1989 133 77 6 chr5 154452333 154452670 -45177480 - MER46B DNA MER2_type 0 236 1 22 0 0 0 chr5 154452726 154452748 -45177402 + AT_rich Low_complexity Low_complexity 1 22 0 5956 168 72 87 chr5 154452979 154454045 -45176105 - L1MDa LINE L1 -2890 3650 2570 2253 113 7 0 chr5 154454045 154454355 -45175795 - AluSq SINE Alu -1 312 1 5956 168 72 87 chr5 154454355 154455687 -45174463 - L1MDa LINE L1 -3970 2570 1314 2228 111 10 7 chr5 154455687 154455993 -45174157 - AluSx SINE Alu -5 307 1 5956 168 72 87 chr5 154455993 154456229 -45173921 - L1MDa LINE L1 -5226 1314 1076 438 281 67 43 chr5 154456223 154456550 -45173600 + L1ME3A LINE L1 5617 5951 -219 * 630 213 74 0 chr5 154456839 154456961 -45173189 + FLAM_A SINE Alu 1 131 -2 336 220 0 0 chr5 154456987 154457046 -45173104 + MIR SINE MIR 31 89 -173 532 165 61 9 chr5 154457046 154457161 -45172989 + MLT1A1 LTR MaLR 40 160 -205 * 1031 210 31 19 chr5 154457159 154457416 -45172734 + MLT1A1 LTR MaLR 106 365 0 474 259 114 0 chr5 154457416 154457547 -45172603 + MIR SINE MIR 85 230 -32 393 310 81 81 chr5 154457602 154457833 -45172317 + HAL1 LINE L1 1059 1292 -1215 1833 145 17 31 chr5 154457833 154458123 -45172027 + AluSx SINE Alu 1 286 -26 393 310 81 81 chr5 154458123 154458275 -45171875 + HAL1 LINE L1 1291 1442 -1065 479 303 167 4 chr5 154458419 154458700 -45171450 + HAL1 LINE L1 1572 1898 -609 25 31 0 0 chr5 154458985 154459017 -45171133 + AT_rich Low_complexity Low_complexity 1 32 0 1343 252 103 18 chr5 154459219 154459715 -45170435 + MER90 LTR ERV1 73 610 -4 2327 74 0 0 chr5 154459778 154460087 -45170063 + AluSp SINE Alu 1 309 0 2075 140 5 75 chr5 154460415 154460829 -45169321 - MLT1B LTR MaLR -3 387 3 1891 268 32 6 chr5 154460905 154461583 -45168567 + L1ME3A LINE L1 5466 6161 -9 330 310 99 86 chr5 154462274 154462964 -45167186 + L1M2 LINE L1 508 1206 -5643 2409 264 69 27 chr5 154465074 154466462 -45163688 - L1ME3A LINE L1 -14 6225 4774 * 6185 150 20 5 chr5 154466459 154467686 -45162464 - L1MC1 LINE L1 0 6333 5094 4006 270 83 27 chr5 154467684 154469513 -45160637 - L1MDa LINE L1 -1432 4783 2774 * 2068 108 4 0 chr5 154469513 154469791 -45160359 - AluSg SINE Alu -31 279 1 4006 270 83 27 chr5 154469791 154470447 -45159703 - L1MDa LINE L1 -3441 2774 2156 333 355 17 39 chr5 154470510 154470744 -45159406 - L1MDa LINE L1 -4310 2086 1858 639 270 95 42 chr5 154470761 154470864 -45159286 - L1MDa LINE L1 -4592 1804 1708 2142 137 0 3 chr5 154470864 154471163 -45158987 + AluSx SINE Alu 1 298 -14 639 270 95 42 chr5 154471163 154471795 -45158355 - L1MDa LINE L1 -4688 1708 1030 1866 141 0 7 chr5 154472743 154473056 -45157094 - AluJo SINE Alu 0 311 1 1874 127 19 60 chr5 154473599 154473913 -45156237 - AluSx SINE Alu -11 301 1 21 57 0 0 chr5 154474450 154474485 -45155665 + AT_rich Low_complexity Low_complexity 1 35 0 33 43 0 0 chr5 154474840 154474887 -45155263 + AT_rich Low_complexity Low_complexity 1 47 0 21 71 0 0 chr5 154479299 154479341 -45150809 + AT_rich Low_complexity Low_complexity 1 42 0 917 270 25 13 chr5 154479970 154480207 -45149943 - MIR SINE MIR -3 259 20 22 80 0 0 chr5 154480300 154480350 -45149800 + AT_rich Low_complexity Low_complexity 1 50 0 21 36 0 0 chr5 154480823 154480851 -45149299 + AT_rich Low_complexity Low_complexity 1 28 0 1966 152 3 7 chr5 154480961 154481263 -45148887 + AluJo SINE Alu 1 301 -11 1892 214 32 11 chr5 154481263 154481730 -45148420 + L1M4 LINE L1 4261 4737 -1409 2572 33 0 3 chr5 154482372 154482671 -45147479 - AluY SINE Alu -13 298 1 1513 176 56 28 chr5 154482690 154482974 -45147176 - AluJo SINE Alu -20 292 1 5444 222 78 37 chr5 154482974 154483375 -45146775 - L1M4 LINE L1 -2293 4351 3968 549 90 13 0 chr5 154483375 154483453 -45146697 - MADE1 DNA Mariner 0 80 2 5444 222 78 37 chr5 154483453 154485415 -45144735 - L1M4 LINE L1 -2676 3968 1836 19592 39 43 2 chr5 154485415 154488569 -45141581 + L1PA4 LINE L1 2968 6154 -1 5444 222 78 37 chr5 154488569 154489041 -45141109 - L1M4 LINE L1 -4808 1836 1385 214 106 43 21 chr5 154489041 154489088 -45141062 + CT-rich Low_complexity Low_complexity 4 51 0 2527 56 0 3 chr5 154489091 154489395 -45140755 - AluY SINE Alu -8 303 1 270 0 0 0 chr5 154489396 154489426 -45140724 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 1381 248 62 29 chr5 154489453 154489869 -45140281 - L1M4 LINE L1 -6105 437 8 1571 193 32 3 chr5 154491167 154491452 -45138698 - AluJo SINE Alu -19 293 1 2541 55 0 3 chr5 154491960 154492269 -45137881 - AluY SINE Alu -2 309 2 507 320 0 0 chr5 154493751 154493879 -45136271 - L2 LINE L2 0 3272 3145 1732 152 7 40 chr5 154494696 154494993 -45135157 + AluJb SINE Alu 1 287 -25 2861 3 0 0 chr5 154495616 154495923 -45134227 + AluYa5 SINE Alu 1 307 -4 196 180 40 0 chr5 154501300 154501350 -45128800 - L2 LINE L2 -1 3312 3261 2298 84 3 17 chr5 154501944 154502242 -45127908 + AluSp SINE Alu 5 298 -15 305 282 97 90 chr5 154503194 154503606 -45126544 + L1M2 LINE L1 549 963 -5886 372 326 56 9 chr5 154505980 154506195 -45123955 - L1MC5 LINE L1 -255 7706 7482 1989 171 90 13 chr5 154506200 154506668 -45123482 + L1MC2 LINE L1 5820 6323 -21 1869 96 0 16 chr5 154506672 154506942 -45123208 + AluSc SINE Alu 36 301 0 303 329 48 10 chr5 154507010 154507299 -45122851 - L1MC4 LINE L1 -26 8016 7717 368 238 81 0 chr5 154507454 154507608 -45122542 - L1MC4 LINE L1 -427 7615 7345 1469 196 6 26 chr5 154509371 154509701 -45120449 + AluJb SINE Alu 8 312 0 2542 72 0 0 chr5 154510070 154510377 -45119773 + AluY SINE Alu 1 307 -4 184 30 61 0 chr5 154514059 154514092 -45116058 + (TTG)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr5 154514805 154514827 -45115323 + AT_rich Low_complexity Low_complexity 1 22 0 180 346 37 0 chr5 154515610 154515691 -45114459 - L2 LINE L2 0 3313 3230 2183 116 7 0 chr5 154516048 154516341 -45113809 + AluSx SINE Alu 1 295 -17 2245 99 7 3 chr5 154516470 154516774 -45113376 + AluSx SINE Alu 1 305 -7 368 313 37 34 chr5 154516785 154516937 -45113213 + MIR SINE MIR 39 191 -67 2119 120 3 10 chr5 154516946 154517299 -45112851 + AluSc SINE Alu 1 351 0 1925 131 14 3 chr5 154517667 154517973 -45112177 + AluSx SINE Alu 1 309 0 547 303 157 31 chr5 154517986 154518438 -45111712 + L2 LINE L2 1719 2227 -1087 215 295 13 51 chr5 154518425 154518503 -45111647 + MIR SINE MIR 68 142 -120 * 203 260 0 20 chr5 154518530 154518580 -45111570 + MIR SINE MIR 101 149 -113 21 0 0 31 chr5 154518618 154518633 -45111517 + AT_rich Low_complexity Low_complexity 1 15 -16 2236 123 0 0 chr5 154518633 154518933 -45111217 - AluSx SINE Alu -12 300 1 21 0 0 31 chr5 154518933 154518949 -45111201 + AT_rich Low_complexity Low_complexity 15 31 0 657 368 63 17 chr5 154519301 154519870 -45110280 + L2 LINE L2 2454 3057 -215 330 294 59 37 chr5 154520446 154520582 -45109568 - L2 LINE L2 0 3272 3134 2270 106 10 0 chr5 154520822 154521124 -45109026 - AluSg SINE Alu -5 305 1 2157 71 0 4 chr5 154521396 154521677 -45108473 + AluSx SINE Alu 1 280 -32 189 0 111 0 chr5 154521678 154521714 -45108436 + A-rich Low_complexity Low_complexity 1 40 0 2298 64 3 14 chr5 154522272 154522567 -45107583 - AluSc SINE Alu -17 292 1 2876 13 0 0 chr5 154523337 154523653 -45106497 - AluYb8 SINE Alu -2 316 1 521 119 119 18 chr5 154524748 154524857 -45105293 - FLAM_C SINE Alu -13 130 11 22 56 0 0 chr5 154525376 154525412 -45104738 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr5 154526211 154526241 -45103909 + AT_rich Low_complexity Low_complexity 1 30 0 861 193 14 0 chr5 154526786 154526931 -45103219 - AluJo SINE Alu -28 284 138 446 246 34 6 chr5 154526934 154527109 -45103041 + CT-rich Low_complexity Low_complexity 1 180 0 643 164 66 0 chr5 154527110 154527232 -45102918 - AluJo SINE Alu -171 131 2 1173 271 90 40 chr5 154527383 154528497 -45101653 - L1M4 LINE L1 -621 5557 4372 1620 112 0 0 chr5 154528599 154528822 -45101328 - AluSg/x SINE Alu 0 310 88 844 177 29 63 chr5 154528822 154528997 -45101153 - AluJo SINE Alu -143 169 1 2065 114 37 10 chr5 154529012 154529311 -45100839 + AluSx SINE Alu 1 307 -5 2269 110 7 0 chr5 154529495 154529794 -45100356 - AluSq SINE Alu -12 301 1 1676 201 0 0 chr5 154529878 154530161 -45099989 - AluJb SINE Alu -16 296 14 445 294 75 60 chr5 154530195 154530420 -45099730 - L1M4 LINE L1 -3114 3032 2812 2298 103 30 0 chr5 154530420 154530722 -45099428 + AluSx SINE Alu 2 312 0 445 294 75 60 chr5 154530722 154531025 -45099125 - L1M4 LINE L1 -3334 2812 2492 2139 116 0 3 chr5 154531025 154531317 -45098833 + AluSx SINE Alu 2 292 -20 445 294 75 60 chr5 154531317 154531358 -45098792 - L1M4 LINE L1 -3654 2492 2453 1590 214 60 58 chr5 154531510 154532011 -45098139 + MLT1D LTR MaLR 2 503 -2 360 167 90 13 chr5 154532108 154532180 -45097970 + FLAM SINE Alu 39 117 -11 372 22 0 0 chr5 154532180 154532225 -45097925 + (CATA)n Simple_repeat Simple_repeat 2 46 0 306 330 54 22 chr5 154532685 154533154 -45096996 - L1ME3 LINE L1 -296 6260 5772 380 286 88 42 chr5 154533179 154533396 -45096754 - L1ME3 LINE L1 -842 5698 5472 480 389 8 4 chr5 154533528 154533767 -45096383 - L1ME3 LINE L1 -1908 4632 4393 23 54 0 0 chr5 154533924 154533961 -45096189 + AT_rich Low_complexity Low_complexity 1 37 0 254 129 50 20 chr5 154534134 154534235 -45095915 + (TA)n Simple_repeat Simple_repeat 1 104 0 1106 306 113 28 chr5 154534235 154534271 -45095879 - L1ME3 LINE L1 -2932 3608 3576 2114 95 3 31 chr5 154534271 154534588 -45095562 - AluY SINE Alu -3 308 1 1106 306 113 28 chr5 154534588 154535523 -45094627 - L1ME3 LINE L1 -2964 3576 2525 651 301 132 42 chr5 154536039 154536609 -45093541 - L1ME3 LINE L1 -967 1934 1229 192 40 0 0 chr5 154537367 154537392 -45092758 + (TC)n Simple_repeat Simple_repeat 2 26 0 1906 155 3 17 chr5 154537392 154537683 -45092467 - AluSx SINE Alu -25 287 1 311 242 0 74 chr5 154537780 154537875 -45092275 - L1MEd LINE L1 -4947 1172 1085 417 246 52 18 chr5 154537876 154538009 -45092141 + MLT1G LTR MaLR 1 134 -421 * 855 266 99 17 chr5 154538003 154538303 -45091847 + MLT1G LTR MaLR 237 583 -7 307 159 43 0 chr5 154538468 154538537 -45091613 + L1MD3 LINE L1 6960 7031 -964 353 265 30 60 chr5 154538557 154538723 -45091427 - L1MEd LINE L1 -5109 1010 850 2344 94 10 3 chr5 154539264 154539571 -45090579 - AluSg SINE Alu -1 309 1 2093 92 29 0 chr5 154539613 154539885 -45090265 - AluSq SINE Alu -33 280 1 24 0 0 0 chr5 154539887 154539911 -45090239 + AT_rich Low_complexity Low_complexity 1 24 0 2145 130 0 0 chr5 154540050 154540351 -45089799 - AluSx SINE Alu -11 301 1 2768 234 85 16 chr5 154540993 154541951 -45088199 + L1MD3 LINE L1 6960 7983 -12 21 71 0 0 chr5 154542279 154542321 -45087829 + AT_rich Low_complexity Low_complexity 1 42 0 2408 110 0 0 chr5 154542367 154542676 -45087474 - AluSc SINE Alu 0 309 1 1975 127 25 51 chr5 154543025 154543340 -45086810 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr5 154543480 154543506 -45086644 + AT_rich Low_complexity Low_complexity 1 26 0 1016 173 0 0 chr5 154543860 154544016 -45086134 - FRAM SINE Alu -17 159 4 2119 134 0 0 chr5 154544497 154544796 -45085354 - AluSx SINE Alu -13 299 1 2431 90 0 7 chr5 154544942 154545252 -45084898 + AluSq SINE Alu 1 308 -5 2166 72 7 14 chr5 154598298 154598576 -45031574 + AluSp SINE Alu 1 276 -37 5337 69 19 10 chr5 154598676 154599346 -45030804 + L1PA8 LINE L1 5497 6172 0 272 167 133 0 chr5 154599383 154599443 -45030707 + L1ME LINE L1 5567 5634 -532 1490 52 0 0 chr5 154599450 154599622 -45030528 + L1PA7 LINE L1 5982 6153 -1 192 152 0 0 chr5 154599645 154599678 -45030472 + (TATG)n Simple_repeat Simple_repeat 2 34 0 1465 182 3 46 chr5 154600660 154600773 -45029377 + AluJo SINE Alu 1 117 -195 393 39 0 0 chr5 154600773 154600824 -45029326 + (TC)n Simple_repeat Simple_repeat 2 52 0 243 0 0 0 chr5 154600823 154600850 -45029300 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 1465 182 3 46 chr5 154600824 154600850 -45029300 + AluJo SINE Alu 117 143 -169 2480 85 0 0 chr5 154600850 154601155 -45028995 - AluSq SINE Alu -8 305 1 1465 182 3 46 chr5 154601155 154601347 -45028803 + AluJo SINE Alu 143 294 -18 26 104 0 0 chr5 154601400 154601496 -45028654 + AT_rich Low_complexity Low_complexity 1 96 0 610 308 34 13 chr5 154601580 154601817 -45028333 - MIR SINE MIR -2 260 19 392 260 108 99 chr5 154602945 154603168 -45026982 + MIR SINE MIR 33 257 -5 395 247 44 32 chr5 154603171 154603301 -45026849 - MIR SINE MIR -62 146 48 2122 93 0 4 chr5 154603768 154604038 -45026112 - AluSg SINE Alu -41 269 1 632 136 76 8 chr5 154604157 154604289 -45025861 + L1PA7 LINE L1 6011 6151 -3 33 25 0 0 chr5 154604289 154604329 -45025821 + AT_rich Low_complexity Low_complexity 1 40 0 1311 207 70 0 chr5 154604357 154604642 -45025508 + L1MD1 LINE L1 5937 6241 -1 371 257 56 30 chr5 154604663 154604933 -45025217 + L1M1 LINE L1 5254 5542 -717 334 333 67 12 chr5 154604944 154605184 -45024966 + L1ME LINE L1 5566 5818 -303 440 228 0 0 chr5 154608012 154608091 -45022059 + AluJ/FLAM SINE Alu 2 80 -232 637 154 39 10 chr5 154608107 154608211 -45021939 + FRAM SINE Alu 51 157 -19 1627 120 146 11 chr5 154608217 154608346 -45021804 + AluJb SINE Alu 1 111 -201 2267 80 28 3 chr5 154608346 154608635 -45021515 + AluSg SINE Alu 1 296 -14 1627 120 146 11 chr5 154608635 154608780 -45021370 + AluJb SINE Alu 111 312 0 181 265 0 88 chr5 154609605 154609673 -45020477 + L3 LINE CR1 1297 1358 -219 2208 77 7 11 chr5 154609839 154610126 -45020024 - AluSg1 SINE Alu -21 288 3 2011 100 4 0 chr5 154610203 154610464 -45019686 + AluSx SINE Alu 13 274 -38 2423 72 3 0 chr5 154610586 154610877 -45019273 + AluSq SINE Alu 1 292 -21 245 189 38 0 chr5 154611117 154611170 -45018980 + MER112 DNA MER1_type 2 56 -204 223 259 148 37 chr5 154611303 154611384 -45018766 + L2 LINE L2 3222 3311 -2 215 235 235 12 chr5 154611451 154611532 -45018618 + MIR SINE MIR 65 163 -99 1490 171 34 41 chr5 154614207 154614500 -45015650 - AluJb SINE Alu -21 291 1 1868 130 13 33 chr5 154614507 154614807 -45015343 - AluJb SINE Alu -18 294 1 2507 82 0 0 chr5 154614817 154615121 -45015029 - AluSq SINE Alu -9 304 1 198 285 114 57 chr5 154616289 154616447 -45013703 + MIR SINE MIR 31 197 -65 1081 118 99 90 chr5 154619881 154620093 -45010057 - AluJb SINE Alu -16 296 83 979 246 44 16 chr5 154620584 154620836 -45009314 + MIR SINE MIR 1 259 -3 217 290 199 23 chr5 154622850 154623019 -45007131 + MIR3 SINE MIR 7 151 -57 2458 85 0 3 chr5 154623034 154623341 -45006809 + AluSg SINE Alu 1 306 -4 2369 88 0 0 chr5 154624621 154624916 -45005234 - AluSc SINE Alu -14 295 1 23 0 0 0 chr5 154625010 154625033 -45005117 + AT_rich Low_complexity Low_complexity 1 23 0 2179 103 14 0 chr5 154625033 154625325 -45004825 + AluSq SINE Alu 1 296 -17 1879 136 36 105 chr5 154625630 154625854 -45004296 + MLT1B LTR MaLR 1 184 -206 2128 125 3 13 chr5 154625854 154626157 -45003993 + AluSx SINE Alu 1 300 -12 1879 136 36 105 chr5 154626157 154626351 -45003799 + MLT1B LTR MaLR 184 390 0 268 309 37 0 chr5 154626473 154626554 -45003596 - L2 LINE L2 -222 3091 3008 711 146 0 41 chr5 154626568 154626691 -45003459 + FLAM_C SINE Alu 1 118 -15 673 299 68 4 chr5 154626746 154627017 -45003133 - L2 LINE L2 -315 2998 2713 891 205 0 0 chr5 154627027 154627178 -45002972 - FAM SINE Alu -19 166 16 308 225 0 0 chr5 154627183 154627254 -45002896 + L1MC/D LINE L1 5701 5771 -2037 2129 115 10 3 chr5 154628021 154628316 -45001834 + AluSx SINE Alu 1 297 -15 1105 103 0 13 chr5 154628318 154628473 -45001677 + AluSg/x SINE Alu 142 294 -16 2388 72 7 3 chr5 154628479 154628785 -45001365 + AluY SINE Alu 1 307 -4 297 288 74 18 chr5 154628950 154629116 -45001034 - MIR SINE MIR -66 142 18 5476 161 72 79 chr5 154629134 154629667 -45000483 - Charlie1a DNA MER1_type -1316 1445 910 1458 125 37 64 chr5 154629667 154629912 -45000238 + L1MB4 LINE L1 5893 6130 -50 2428 88 0 3 chr5 154629912 154630208 -44999942 + AluSc SINE Alu 1 295 -14 1458 125 37 64 chr5 154630208 154630258 -44999892 + L1MB4 LINE L1 6130 6180 0 5476 161 72 79 chr5 154630258 154630405 -44999745 - Charlie1a DNA MER1_type -1851 910 763 2268 103 0 13 chr5 154630405 154630706 -44999444 - AluY SINE Alu -14 297 1 2267 119 3 0 chr5 154630708 154631010 -44999140 - AluSx SINE Alu -7 305 3 5476 161 72 79 chr5 154631010 154631074 -44999076 - Charlie1a DNA MER1_type -1999 762 699 2188 101 35 0 chr5 154631074 154631362 -44998788 - AluSp SINE Alu -11 302 5 5476 161 72 79 chr5 154631362 154631720 -44998430 - Charlie1a DNA MER1_type -2062 699 340 1568 139 31 96 chr5 154631720 154632043 -44998107 + AluSx SINE Alu 1 302 -10 5476 161 72 79 chr5 154632043 154632294 -44997856 - Charlie1a DNA MER1_type -2421 340 93 2162 102 0 3 chr5 154632294 154632605 -44997545 + AluSx SINE Alu 1 310 0 5476 161 72 79 chr5 154632605 154632656 -44997494 - Charlie1a DNA MER1_type -2668 93 43 1462 221 54 83 chr5 154632734 154633443 -44996707 - L1MC5 LINE L1 -48 7913 7226 1067 215 92 40 chr5 154633696 154633923 -44996227 + MER2 DNA MER2_type 2 253 -92 871 173 0 0 chr5 154633923 154634056 -44996094 - FLAM_C SINE Alu 0 133 1 1067 215 92 40 chr5 154634056 154634154 -44995996 + MER2 DNA MER2_type 253 344 -1 644 300 85 94 chr5 154634331 154634627 -44995523 + L2 LINE L2 2829 3121 -151 2243 104 10 0 chr5 154634627 154634925 -44995225 + AluSq SINE Alu 1 301 -12 644 300 85 94 chr5 154634925 154635075 -44995075 + L2 LINE L2 3121 3271 -1 436 306 46 23 chr5 154636313 154636486 -44993664 - MIR SINE MIR -14 248 72 566 232 102 0 chr5 154636527 154636704 -44993446 - MER46C DNA MER2_type -143 195 1 23 0 0 0 chr5 154637046 154637069 -44993081 + AT_rich Low_complexity Low_complexity 1 23 0 2335 92 3 0 chr5 154637071 154637365 -44992785 + AluSx SINE Alu 3 297 -15 2319 95 3 3 chr5 154637510 154637806 -44992344 + AluSg SINE Alu 1 296 -14 384 264 48 48 chr5 154638908 154639033 -44991117 - MER5A DNA MER1_type -12 177 53 921 101 8 0 chr5 154639042 154639161 -44990989 + AluSq SINE Alu 1 120 -193 1327 97 0 0 chr5 154639249 154639414 -44990736 + AluSq SINE Alu 129 293 -20 662 190 33 8 chr5 154639416 154639537 -44990613 - AluJo/FLAM SINE Alu -187 125 2 260 262 234 0 chr5 154639774 154639881 -44990269 - L2 LINE L2 0 3313 3182 207 0 0 0 chr5 154641295 154641318 -44988832 + (T)n Simple_repeat Simple_repeat 1 23 0 2051 88 103 0 chr5 154643951 154644223 -44985927 - AluSg SINE Alu -10 300 1 201 200 125 0 chr5 154644623 154644663 -44985487 + MIR3 SINE MIR 116 160 -48 239 331 24 71 chr5 154645453 154645580 -44984570 + MIR3 SINE MIR 65 185 -23 188 321 94 0 chr5 154646015 154646068 -44984082 + MIR SINE MIR 198 255 -7 986 119 0 21 chr5 154646818 154646961 -44983189 + FLAM_C SINE Alu 1 140 -3 1688 201 95 66 chr5 154647411 154647694 -44982456 - MLT1F LTR MaLR 0 542 236 2403 79 26 0 chr5 154647694 154647998 -44982152 - AluSp SINE Alu -1 312 1 1688 201 95 66 chr5 154647998 154648241 -44981909 - MLT1F LTR MaLR -306 236 1 38 22 0 0 chr5 154649252 154649297 -44980853 + AT_rich Low_complexity Low_complexity 1 45 0 1817 139 83 3 chr5 154649304 154649642 -44980508 - MER47A DNA MER2_type 0 366 2 615 113 17 35 chr5 154649665 154649780 -44980370 - L1MC1 LINE L1 0 6333 6221 520 262 55 8 chr5 154649839 154650022 -44980128 + MIR SINE MIR 29 262 0 211 313 0 0 chr5 154650076 154650143 -44980007 + GA-rich Low_complexity Low_complexity 3 69 0 755 98 18 0 chr5 154651388 154651500 -44978650 - AluSx SINE Alu 0 312 199 1172 65 7 0 chr5 154651501 154651639 -44978511 - AluSx SINE Alu -173 139 1 734 162 73 141 chr5 154651669 154651903 -44978247 - MER20 DNA MER1_type 0 219 2 2017 122 30 7 chr5 154652548 154652851 -44977299 - AluSq SINE Alu -3 310 1 2130 76 17 31 chr5 154653137 154653428 -44976722 - AluY SINE Alu -24 287 1 184 237 0 0 chr5 154653547 154653585 -44976565 - L2 LINE L2 -89 3224 3187 266 241 46 19 chr5 154653806 154653914 -44976236 + L1MC/D LINE L1 5771 5881 -1927 589 225 31 0 chr5 154654130 154654259 -44975891 + FLAM_C SINE Alu 1 133 0 2114 128 0 6 chr5 154654263 154654575 -44975575 + AluSx SINE Alu 1 310 -2 2441 97 0 0 chr5 154654578 154654887 -44975263 + AluSc SINE Alu 1 309 0 815 58 9 7 chr5 154654901 154655127 -44975023 + AluSx SINE Alu 15 290 -20 514 228 0 59 chr5 154655130 154655268 -44974882 + FLAM_A SINE Alu 1 128 -5 714 116 18 0 chr5 154655920 154656032 -44974118 + L1MC3 LINE L1 6747 6860 -925 241 281 219 8 chr5 154656139 154656395 -44973755 - HAL1b LINE L1 -981 367 58 2464 87 3 0 chr5 154656841 154657153 -44972997 - AluSq SINE Alu 0 313 1 1549 161 53 14 chr5 154657283 154657450 -44972700 - AluJo SINE Alu -4 298 114 239 0 0 31 chr5 154657450 154657482 -44972668 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1549 161 53 14 chr5 154657482 154657599 -44972551 - AluJo SINE Alu -188 114 3 3843 184 77 85 chr5 154658098 154658169 -44971981 - L1MB3 LINE L1 -2 6181 6111 788 179 0 8 chr5 154658169 154658303 -44971847 - FLAM_C SINE Alu 0 133 1 3843 184 77 85 chr5 154658303 154658573 -44971577 - L1MB3 LINE L1 -72 6111 5840 2491 88 0 0 chr5 154658573 154658879 -44971271 - AluSx SINE Alu -6 306 1 3843 184 77 85 chr5 154658879 154659107 -44971043 - L1MB3 LINE L1 -343 5840 5612 2297 118 0 0 chr5 154659107 154659413 -44970737 - AluSg SINE Alu -4 306 1 3843 184 77 85 chr5 154659413 154660229 -44969921 - L1MB3 LINE L1 -571 5612 2426 2191 79 20 0 chr5 154660392 154660718 -44969432 + AluSp SINE Alu 3 313 0 203 0 37 0 chr5 154660800 154660827 -44969323 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 953 201 0 6 chr5 154660827 154660986 -44969164 - FAM SINE Alu -17 158 1 2106 110 0 10 chr5 154661031 154661321 -44968829 - AluSx SINE Alu -25 287 1 199 211 0 0 chr5 154661739 154661777 -44968373 - L2 LINE L2 -89 3224 3187 305 241 46 19 chr5 154661998 154662106 -44968044 + L1MD3 LINE L1 5771 5881 -1927 247 213 0 33 chr5 154662163 154662224 -44967926 + L1ME4a LINE L1 5951 6009 -112 1150 208 100 29 chr5 154662325 154662457 -44967693 + AluJo SINE Alu 1 122 -180 1840 154 0 7 chr5 154662457 154662791 -44967359 + AluSx SINE Alu 1 312 0 1150 208 100 29 chr5 154662791 154662937 -44967213 + AluJo SINE Alu 122 299 -3 508 160 30 10 chr5 154663533 154663633 -44966517 + L1MD3 LINE L1 6787 6888 -1107 2548 48 0 13 chr5 154663637 154663952 -44966198 + AluY SINE Alu 1 311 0 1345 148 27 112 chr5 154664985 154665323 -44964827 - AluJo SINE Alu -3 309 1 4236 157 5 60 chr5 154665830 154666144 -44964006 - L1MB3 LINE L1 -3 6180 5850 2310 88 3 0 chr5 154666144 154666440 -44963710 - AluSx SINE Alu -15 297 1 4236 157 5 60 chr5 154666440 154666864 -44963286 - L1MB3 LINE L1 -333 5850 5489 285 29 0 0 chr5 154666864 154666898 -44963252 + (TG)n Simple_repeat Simple_repeat 2 35 0 4236 157 5 60 chr5 154666898 154666982 -44963168 - L1MB3 LINE L1 -694 5489 5402 594 250 162 51 chr5 154666953 154667545 -44962605 - L1M4 LINE L1 -3093 3053 2396 * 978 216 0 6 chr5 154667748 154667924 -44962226 - FAM SINE Alu 0 175 1 2017 121 0 7 chr5 154667969 154668258 -44961892 - AluSx SINE Alu -25 287 1 2308 74 3 46 chr5 154668351 154668676 -44961474 - AluY SINE Alu 0 311 1 199 211 0 0 chr5 154669000 154669038 -44961112 - L2 LINE L2 -89 3224 3187 319 231 46 19 chr5 154669259 154669367 -44960783 + L1MC3 LINE L1 5771 5881 -1927 1059 178 109 82 chr5 154669586 154669731 -44960419 + AluJo SINE Alu 1 141 -161 2034 125 0 7 chr5 154669731 154670028 -44960122 + AluSx SINE Alu 1 295 -17 1059 178 109 82 chr5 154670028 154670175 -44959975 + AluJo SINE Alu 141 301 -1 693 146 16 16 chr5 154670757 154670880 -44959270 + L1MC3 LINE L1 6737 6859 -926 234 282 225 9 chr5 154670975 154671188 -44958962 - HAL1b LINE L1 -965 383 125 2166 121 0 0 chr5 154671227 154671517 -44958633 - AluSg SINE Alu -20 290 1 213 240 0 0 chr5 154671633 154671683 -44958467 + T-rich Low_complexity Low_complexity 1 50 0 1602 156 20 13 chr5 154672076 154672255 -44957895 - AluJb SINE Alu -9 303 120 189 0 0 0 chr5 154672255 154672276 -44957874 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1602 156 20 13 chr5 154672276 154672397 -44957753 - AluJb SINE Alu -192 120 1 4288 156 7 56 chr5 154672906 154673219 -44956931 - L1MB3 LINE L1 -3 6180 5853 267 31 0 0 chr5 154673219 154673251 -44956899 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1614 135 81 0 chr5 154673251 154673510 -44956640 - AluY SINE Alu -31 280 1 4288 156 7 56 chr5 154673510 154673930 -44956220 - L1MB3 LINE L1 -329 5854 5488 342 0 0 0 chr5 154673930 154673968 -44956182 + (TG)n Simple_repeat Simple_repeat 1 38 0 4288 156 7 56 chr5 154673968 154674051 -44956099 - L1MB3 LINE L1 -695 5488 5402 525 265 203 32 chr5 154674022 154674558 -44955592 - L1M4 LINE L1 -3093 3053 2426 * 316 281 118 33 chr5 154674588 154674741 -44955409 - L1ME3A LINE L1 -15 6155 5990 893 222 18 12 chr5 154674787 154674958 -44955192 - FAM SINE Alu -3 172 1 28 48 0 0 chr5 154674970 154675012 -44955138 + AT_rich Low_complexity Low_complexity 1 42 0 2039 132 0 0 chr5 154675012 154675299 -44954851 - AluSx SINE Alu -25 287 1 812 282 102 42 chr5 154675382 154675882 -44954268 - L1ME3A LINE L1 -214 5956 5427 2519 65 3 0 chr5 154675941 154676249 -44953901 - AluY SINE Alu -2 309 1 457 283 69 34 chr5 154676326 154676559 -44953591 - L1ME3A LINE L1 -21 6149 5909 630 125 0 0 chr5 154676588 154676676 -44953474 - 5S rRNA rRNA -33 88 1 268 169 77 0 chr5 154676679 154676744 -44953406 - L1ME3A LINE L1 -299 5871 5802 2355 87 3 16 chr5 154676883 154677195 -44952955 - AluSq SINE Alu -5 308 1 2002 219 63 23 chr5 154677456 154677755 -44952395 + L1MDa LINE L1 80 406 -6134 378 0 0 0 chr5 154677755 154677797 -44952353 + (CA)n Simple_repeat Simple_repeat 2 43 0 2002 219 63 23 chr5 154677797 154677972 -44952178 + L1MDa LINE L1 406 573 -5967 531 268 38 33 chr5 154677973 154678156 -44951994 + MER72 LTR ERV1 1 184 -538 1010 155 6 30 chr5 154678158 154678326 -44951824 - AluJo SINE Alu -143 169 6 1205 198 93 97 chr5 154678340 154678938 -44951212 + MER72-int LTR ERV1 2604 4574 -1757 875 143 0 0 chr5 154679608 154679727 -44950423 - FLAM_C SINE Alu -19 124 6 699 289 40 28 chr5 154680028 154680281 -44949869 + MER72-int LTR ERV1 6071 6326 -432 364 387 0 0 chr5 154680337 154680523 -44949627 + MER70-int LTR ERVL 4541 4726 -297 758 254 79 38 chr5 154680623 154680986 -44949164 + MER72-int LTR ERV1 6355 7079 -156 1183 274 66 75 chr5 154681009 154681702 -44948448 + MER72 LTR ERV1 1 687 -35 2985 181 71 36 chr5 154681751 154682461 -44947689 + L1MDa LINE L1 436 1479 -5061 459 206 153 12 chr5 154682446 154682616 -44947534 + L1MDa LINE L1 2297 2490 -4050 * 933 158 0 0 chr5 154682616 154682755 -44947395 + FLAM_C SINE Alu 1 139 -4 1431 118 54 0 chr5 154682944 154683148 -44947002 - AluSg/x SINE Alu -14 296 82 2130 124 3 0 chr5 154683246 154683544 -44946606 - AluSx SINE Alu -13 299 1 35 41 0 0 chr5 154683638 154683687 -44946463 + AT_rich Low_complexity Low_complexity 1 49 0 1736 105 4 4 chr5 154683946 154684184 -44945966 + L1PB1 LINE L1 5909 6146 -5 708 267 42 105 chr5 154684245 154684864 -44945286 - L1P LINE L1 -1978 4168 3589 1984 149 7 0 chr5 154684886 154685194 -44944956 - AluJo SINE Alu -2 310 1 447 239 57 17 chr5 154685197 154685373 -44944777 - HAL1 LINE L1 -331 2176 1994 1950 241 112 0 chr5 154686426 154686900 -44943250 - REP3 LTR ERV -35 527 1 1656 201 0 7 chr5 154687021 154687310 -44942840 - AluJb SINE Alu -23 289 3 191 88 29 0 chr5 154687671 154687705 -44942445 + (TA)n Simple_repeat Simple_repeat 2 36 0 322 211 29 67 chr5 154687719 154687823 -44942327 - L1MC4 LINE L1 -371 7671 7572 * 1042 187 104 5 chr5 154687799 154687851 -44942299 - L1P5 LINE L1 -489 5667 5622 1804 119 23 0 chr5 154687851 154688112 -44942038 - L1MB2 LINE L1 -10 6161 5895 1803 128 0 0 chr5 154688112 154688363 -44941787 - AluSg SINE Alu -59 251 1 1042 187 104 5 chr5 154688363 154688571 -44941579 - L1P5 LINE L1 -533 5623 5386 3965 100 15 0 chr5 154688573 154689112 -44941038 - MER41B LTR ERV1 -88 547 1 2082 133 3 0 chr5 154689127 154689439 -44940711 - AluSq SINE Alu 0 313 1 5474 104 37 3 chr5 154689439 154690216 -44939934 - MER41B-int LTR ERV1 -5 5941 5138 2262 105 0 3 chr5 154690216 154690511 -44939639 - AluSg SINE Alu -16 294 1 2300 92 0 0 chr5 154690517 154690810 -44939340 - AluSg SINE Alu -17 293 1 2078 102 7 16 chr5 154690815 154691118 -44939032 - AluSg SINE Alu -10 300 1 1236 273 42 34 chr5 154691119 154691591 -44938559 - L1MB2 LINE L1 -1984 5824 5349 20353 173 42 17 chr5 154691644 154692288 -44937862 - L1PA13 LINE L1 -2 6812 6186 2122 114 6 22 chr5 154692288 154692603 -44937547 - AluJb SINE Alu -2 310 1 20353 173 42 17 chr5 154692603 154695026 -44935124 - L1PA13 LINE L1 -628 6186 3825 2087 145 7 0 chr5 154695026 154695329 -44934821 - AluSx SINE Alu -7 305 1 20353 173 42 17 chr5 154695329 154698680 -44931470 - L1PA13 LINE L1 -2989 3825 199 6015 201 19 30 chr5 154698679 154698795 -44931355 - L1 LINE L1 -2470 3676 3560 * 2535 68 0 0 chr5 154698795 154699104 -44931046 - AluY SINE Alu 0 311 3 6015 201 19 30 chr5 154699104 154699534 -44930616 - L1 LINE L1 -2586 3560 3127 1652 167 0 18 chr5 154699534 154699816 -44930334 - AluJb SINE Alu -25 287 11 6015 201 19 30 chr5 154699816 154700664 -44929486 - L1 LINE L1 -3019 3127 2296 543 86 0 0 chr5 154700665 154700735 -44929415 - Alu SINE Alu -7 303 234 1080 309 68 12 chr5 154700850 154701358 -44928792 - L2 LINE L2 -247 3066 2527 2483 258 75 46 chr5 154701611 154702670 -44927480 - L1MC4 LINE L1 -169 7873 6785 208 214 24 0 chr5 154702698 154702740 -44927410 + L2 LINE L2 3263 3305 -8 308 24 24 0 chr5 154702923 154702964 -44927186 + (CA)n Simple_repeat Simple_repeat 2 43 0 3900 61 4 0 chr5 154703037 154703060 -44927090 + L1P LINE L1 3926 3947 -2199 8253 49 0 0 chr5 154703060 154704788 -44925362 - L1PA5 LINE L1 -2 6152 4424 3900 61 4 0 chr5 154704788 154705256 -44924894 + L1PA5 LINE L1 3947 4419 -1727 2129 106 3 0 chr5 154705318 154705631 -44924519 + AluSq SINE Alu 1 314 0 687 292 41 76 chr5 154705635 154705858 -44924292 - L1M4 LINE L1 -1526 5118 4889 1654 179 0 52 chr5 154705858 154706068 -44924082 - AluJo SINE Alu -21 291 100 2073 114 3 7 chr5 154706068 154706358 -44923792 - AluSc SINE Alu -16 293 5 1654 179 0 52 chr5 154706358 154706454 -44923696 - AluJo SINE Alu -212 100 1 687 292 41 76 chr5 154706454 154706687 -44923463 - L1M4 LINE L1 -1755 4889 4655 1642 186 3 17 chr5 154706687 154706982 -44923168 - AluJb SINE Alu -21 291 1 687 292 41 76 chr5 154706982 154707216 -44922934 - L1M4 LINE L1 -1989 4655 4414 1175 222 100 45 chr5 154707224 154707657 -44922493 + MLT1C LTR MaLR 12 467 0 1632 180 18 7 chr5 154707844 154708147 -44922003 + AluJo SINE Alu 1 306 0 228 185 0 19 chr5 154709402 154709456 -44920694 + (TA)n Simple_repeat Simple_repeat 2 54 0 4615 226 75 32 chr5 154709478 154709863 -44920287 - L1M4 LINE L1 -3301 3343 2976 207 0 0 0 chr5 154709863 154709886 -44920264 + (TA)n Simple_repeat Simple_repeat 1 23 0 4615 226 75 32 chr5 154709886 154710405 -44919745 - L1M4 LINE L1 -3668 2976 2481 1875 180 0 0 chr5 154710405 154710694 -44919456 + AluSx SINE Alu 1 289 -23 4615 226 75 32 chr5 154710694 154710896 -44919254 - L1M4 LINE L1 -4163 2481 2289 2040 166 155 11 chr5 154710896 154711270 -44918880 - MSTA LTR MaLR 0 428 1 4615 226 75 32 chr5 154711270 154711468 -44918682 - L1M4 LINE L1 -4355 2289 2101 2269 74 3 23 chr5 154711468 154711767 -44918383 - AluY SINE Alu -18 293 1 4615 226 75 32 chr5 154711767 154712343 -44917807 - L1M4 LINE L1 -4543 2101 1372 821 163 0 39 chr5 154712345 154712474 -44917676 - FLAM_C SINE Alu -19 124 1 1590 245 42 26 chr5 154712474 154713045 -44917105 - L1M4 LINE L1 -5146 1396 817 340 239 17 60 chr5 154713139 154713256 -44916894 - L1M4 LINE L1 -5733 913 802 1560 209 62 40 chr5 154713384 154713806 -44916344 - MSTB1 LTR MaLR 0 432 2 767 158 55 0 chr5 154714082 154714209 -44915941 - AluJo SINE Alu -178 134 1 5318 224 38 32 chr5 154714378 154714396 -44915754 - L1MD1 LINE L1 -1 6635 6619 1966 204 23 37 chr5 154714396 154714642 -44915508 + MSTB LTR MaLR 1 240 -186 2225 104 0 10 chr5 154714642 154714941 -44915209 - AluSg SINE Alu -14 296 1 1966 204 23 37 chr5 154714941 154715126 -44915024 + MSTB LTR MaLR 240 426 0 5318 224 38 32 chr5 154715126 154717732 -44912418 - L1MD1 LINE L1 -17 6619 4002 665 89 10 0 chr5 154717753 154717854 -44912296 - HSMAR2 DNA Mariner -3 1299 1198 195 42 0 0 chr5 154717858 154717882 -44912268 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 12255 96 6 2 chr5 154717882 154720370 -44909780 - L1PA10 LINE L1 -21 6462 3962 2581 207 37 40 chr5 154720370 154721224 -44908926 - L1PA10 LINE L1 -5009 1452 10 7204 133 38 34 chr5 154721224 154721414 -44908736 - HSMAR2 DNA Mariner -83 1219 1031 2106 139 3 0 chr5 154721414 154721723 -44908427 + AluSx SINE Alu 1 310 -2 7204 133 38 34 chr5 154721723 154722746 -44907404 - HSMAR2 DNA Mariner -271 1031 1 26 0 0 0 chr5 154722774 154722800 -44907350 + AT_rich Low_complexity Low_complexity 1 26 0 1647 213 37 85 chr5 154722817 154723104 -44907046 - L1MD1 LINE L1 -3221 3319 3072 2256 106 0 23 chr5 154723104 154723405 -44906745 - AluSx SINE Alu -18 294 1 1647 213 37 85 chr5 154723405 154723691 -44906459 - L1MD1 LINE L1 -3468 3072 2774 2052 134 0 3 chr5 154723696 154723988 -44906162 - AluSx SINE Alu -21 291 1 1997 105 15 73 chr5 154724062 154724404 -44905746 + HSMAR2 DNA Mariner 499 820 -482 321 250 39 0 chr5 154724410 154724514 -44905636 - L1MD1 LINE L1 -3997 2724 2617 * 4337 216 136 37 chr5 154724513 154724531 -44905619 - L1MD1 LINE L1 -4785 1755 1740 1824 204 0 3 chr5 154724531 154724844 -44905306 - AluJb SINE Alu 0 312 1 4337 216 136 37 chr5 154724844 154725138 -44905012 - L1MD1 LINE L1 -4800 1740 1477 877 230 0 0 chr5 154725138 154725299 -44904851 - FRAM SINE Alu -5 161 1 4337 216 136 37 chr5 154725299 154725965 -44904185 - L1MD1 LINE L1 -5063 1477 878 2545 193 17 2 chr5 154725965 154726385 -44903765 + MSTB LTR MaLR 1 426 0 9561 178 14 23 chr5 154726385 154726757 -44903393 + MSTB-int LTR MaLR 1 375 -1276 2329 86 6 25 chr5 154726757 154727072 -44903078 - AluY SINE Alu -2 309 1 9561 178 14 23 chr5 154727072 154728364 -44901786 + MSTB-int LTR MaLR 375 1651 0 2393 165 44 12 chr5 154728364 154728777 -44901373 + MSTB LTR MaLR 1 426 0 4337 216 136 37 chr5 154728777 154729235 -44900915 - L1MD1 LINE L1 -5661 879 172 26 0 0 0 chr5 154730266 154730292 -44899858 + AT_rich Low_complexity Low_complexity 1 26 0 314 282 101 105 chr5 154731956 154732549 -44897601 - L1M2 LINE L1 -5751 1098 508 2110 113 7 7 chr5 154733616 154733918 -44896232 + AluSx SINE Alu 1 302 -10 308 301 32 64 chr5 154734108 154734264 -44895886 - MIR SINE MIR -10 252 102 346 306 82 8 chr5 154735646 154735780 -44894370 + MLT1I LTR MaLR 63 206 -203 1103 220 38 103 chr5 154736408 154736835 -44893315 - MLT1C LTR MaLR 0 467 69 786 309 77 53 chr5 154737376 154737845 -44892305 + MLT1K LTR MaLR 79 558 -30 1490 145 0 0 chr5 154738464 154738685 -44891465 + L1MB2 LINE L1 5644 5864 -307 2469 132 36 26 chr5 154738686 154739103 -44891047 + L1MB2 LINE L1 5749 6169 -2 320 289 90 111 chr5 154740656 154741199 -44888951 - L1M2 LINE L1 -5789 1060 529 1998 104 9 61 chr5 154742294 154742620 -44887530 - AluSx SINE Alu -3 309 1 296 263 131 22 chr5 154745089 154745226 -44884924 + MIR SINE MIR 100 251 -11 415 289 101 89 chr5 154746889 154747703 -44882447 - L1M2 LINE L1 -5478 1371 522 1207 266 83 41 chr5 154754416 154755124 -44875026 - L1ME3A LINE L1 -143 6027 5290 296 209 291 24 chr5 154755239 154755449 -44874701 - L1ME3A LINE L1 -937 5209 4944 7687 43 0 0 chr5 154755463 154756429 -44873721 - L1PA6 LINE L1 -8 6146 5174 3278 212 65 62 chr5 154756456 154757073 -44873077 - L1M3d LINE L1 -2497 5068 4445 509 231 30 37 chr5 154757073 154757207 -44872943 - FLAM_C SINE Alu 0 133 1 3278 212 65 62 chr5 154757207 154757702 -44872448 - L1M3d LINE L1 -3120 4445 3953 6701 128 27 68 chr5 154757710 154758162 -44871988 - Tigger3b DNA MER2_type -1819 1209 740 1880 150 3 11 chr5 154758162 154758448 -44871702 + AluJo SINE Alu 1 284 -28 6701 128 27 68 chr5 154758448 154759254 -44870896 - Tigger3b DNA MER2_type -2288 740 2 1783 262 52 35 chr5 154759254 154760460 -44869690 - L1 LINE L1 -3613 3952 2720 2663 241 75 111 chr5 154760465 154760949 -44869201 - L1M3d LINE L1 -4521 2965 2465 264 30 0 0 chr5 154760949 154760982 -44869168 + (TG)n Simple_repeat Simple_repeat 1 33 0 2663 241 75 111 chr5 154760982 154761917 -44868233 - L1M3d LINE L1 -5021 2465 1597 539 312 91 16 chr5 154762149 154762864 -44867286 - L1M4c LINE L1 -4617 2412 1495 1508 193 36 4 chr5 154763003 154763277 -44866873 + AluJo SINE Alu 1 283 -29 360 299 92 84 chr5 154767438 154768117 -44862033 - L1M4c LINE L1 -5478 1371 508 24 0 0 0 chr5 154768785 154768809 -44861341 + AT_rich Low_complexity Low_complexity 1 24 0 1293 183 78 61 chr5 154768913 154769208 -44860942 - AluJo SINE Alu -2 300 1 26 0 0 0 chr5 154769260 154769286 -44860864 + AT_rich Low_complexity Low_complexity 1 26 0 24 53 0 0 chr5 154769387 154769425 -44860725 + AT_rich Low_complexity Low_complexity 1 38 0 309 328 16 16 chr5 154769601 154769723 -44860427 - L1MC4a LINE L1 -1919 5889 5768 213 82 109 0 chr5 154769788 154769898 -44860252 + (TA)n Simple_repeat Simple_repeat 2 123 0 1707 128 83 4 chr5 154769904 154770170 -44859980 - AluSp SINE Alu -26 287 1 364 288 98 97 chr5 154773757 154774326 -44855824 - L1 LINE L1 -5751 1815 1246 26 0 0 0 chr5 154774959 154774985 -44855165 + AT_rich Low_complexity Low_complexity 1 26 0 27 62 0 0 chr5 154775016 154775064 -44855086 + AT_rich Low_complexity Low_complexity 1 48 0 1543 189 21 32 chr5 154775825 154776110 -44854040 - AluJb SINE Alu -19 283 2 440 325 91 17 chr5 154776136 154776367 -44853783 + MIR SINE MIR 2 249 -13 320 301 181 73 chr5 154780048 154780612 -44849538 - L1M2 LINE L1 -5687 1162 538 21 0 0 0 chr5 154782040 154782061 -44848089 + AT_rich Low_complexity Low_complexity 1 21 0 276 100 0 0 chr5 154782064 154782104 -44848046 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 1494 213 3 19 chr5 154782113 154782427 -44847723 - AluJo SINE Alu -3 309 1 486 0 0 0 chr5 154782526 154782580 -44847570 + (TG)n Simple_repeat Simple_repeat 2 55 0 1615 166 0 35 chr5 154782582 154782872 -44847278 - AluSx SINE Alu -32 280 1 311 250 62 55 chr5 154782897 154783025 -44847125 - L1ME4a LINE L1 -249 5872 5744 1297 225 89 8 chr5 154783106 154783406 -44846744 + AluJb SINE Alu 5 325 0 1536 147 0 0 chr5 154783851 154784069 -44846081 - AluJb SINE Alu -25 287 70 352 297 86 96 chr5 154787013 154787666 -44842484 - L1M2 LINE L1 -5478 1371 508 186 370 81 21 chr5 154790043 154790278 -44839872 + MIR SINE MIR 12 260 -2 2411 87 0 3 chr5 154790811 154791122 -44839028 - AluSg SINE Alu 0 310 1 317 275 147 64 chr5 154794375 154794750 -44835400 - L1M2 LINE L1 -5439 1410 1005 27 0 0 0 chr5 154795353 154795380 -44834770 + AT_rich Low_complexity Low_complexity 1 27 0 29 28 0 0 chr5 154796645 154796681 -44833469 + AT_rich Low_complexity Low_complexity 1 36 0 2154 125 0 0 chr5 154796722 154797019 -44833131 - AluSg SINE Alu -8 302 6 2365 65 0 3 chr5 154797334 154797627 -44832523 - AluY SINE Alu -19 292 1 404 258 25 17 chr5 154798011 154798131 -44832019 + MER94 DNA DNA 14 134 0 264 292 118 28 chr5 154798149 154798293 -44831857 + MER5A DNA MER1_type 30 186 -3 1495 173 46 18 chr5 154798342 154798625 -44831525 + AluJb SINE Alu 9 299 -13 364 330 110 5 chr5 154799654 154799845 -44830305 - MIR SINE MIR -12 250 40 392 242 190 95 chr5 154801710 154802289 -44827861 - L1M2 LINE L1 -5687 1162 529 24 0 0 0 chr5 154803963 154803987 -44826163 + AT_rich Low_complexity Low_complexity 1 24 0 765 170 0 0 chr5 154804456 154804568 -44825582 + FLAM_C SINE Alu 2 113 -30 307 163 0 43 chr5 154804582 154804674 -44825476 + (TA)n Simple_repeat Simple_repeat 1 88 0 917 160 0 63 chr5 154804674 154804849 -44825301 + AluJb SINE Alu 136 299 -13 2380 66 26 0 chr5 154805175 154805477 -44824673 - AluY SINE Alu -1 310 1 465 284 95 100 chr5 154807100 154807720 -44822430 - L1M2 LINE L1 -5446 1403 787 2086 121 0 20 chr5 154808161 154808459 -44821691 + AluSx SINE Alu 1 292 -20 832 117 0 16 chr5 154809364 154809492 -44820658 + FLAM_C SINE Alu 1 126 -17 315 317 76 44 chr5 154810023 154810272 -44819878 - MIR SINE MIR -1 261 5 35 24 0 0 chr5 154812518 154812560 -44817590 + AT_rich Low_complexity Low_complexity 1 42 0 363 309 112 88 chr5 154814766 154815830 -44814320 - L1M2 LINE L1 -5446 1403 499 623 227 107 0 chr5 154816387 154816537 -44813613 - FAM SINE Alu -14 171 6 1449 188 0 0 chr5 154816794 154817033 -44813117 + AluJo SINE Alu 2 240 -72 22 0 0 0 chr5 154817675 154817697 -44812453 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 154817852 154817881 -44812269 + AT_rich Low_complexity Low_complexity 1 29 0 2216 122 0 0 chr5 154818114 154818409 -44811741 - AluSx SINE Alu -17 295 1 443 290 91 106 chr5 154821087 154822203 -44807947 - L1M2 LINE L1 -5478 1371 522 275 146 0 0 chr5 154822617 154822665 -44807485 - L1MC4 LINE L1 -13 8029 7982 651 184 8 40 chr5 154823239 154823364 -44806786 - FLAM_A SINE Alu -12 121 1 21 0 0 0 chr5 154823371 154823392 -44806758 + AT_rich Low_complexity Low_complexity 1 21 0 439 367 91 29 chr5 154823550 154824068 -44806082 - L2 LINE L2 -630 2684 2135 1280 237 138 33 chr5 154824083 154824534 -44805616 - MLT1D LTR MaLR -7 498 1 419 296 173 70 chr5 154827933 154828535 -44801615 - L1M2 LINE L1 -5687 1162 499 242 333 67 12 chr5 154829847 154830087 -44800063 - L1ME LINE L1 -303 5818 5566 304 256 40 30 chr5 154830169 154830368 -44799782 - L1M3 LINE L1 -717 5454 5254 1228 203 66 0 chr5 154830389 154830675 -44799475 - L1MD1 LINE L1 -1 6241 5937 29 28 0 0 chr5 154830703 154830739 -44799411 + AT_rich Low_complexity Low_complexity 1 36 0 452 130 56 56 chr5 154830739 154830847 -44799303 - L1PA10 LINE L1 -1 6167 6060 2396 95 0 3 chr5 154830994 154831300 -44798850 + AluSg SINE Alu 1 305 -5 329 280 13 0 chr5 154831338 154831413 -44798737 - L2 LINE L2 -4 3309 3234 1697 252 102 24 chr5 154831421 154831542 -44798608 - L1MEc LINE L1 -4625 1771 1661 2485 63 0 0 chr5 154831542 154831844 -44798306 - AluY SINE Alu -9 302 1 1697 252 102 24 chr5 154831844 154832657 -44797493 - L1MEc LINE L1 -4735 1661 764 180 111 0 0 chr5 154832659 154832686 -44797464 + (TG)n Simple_repeat Simple_repeat 2 28 0 767 167 41 147 chr5 154832696 154832941 -44797209 + MER20 DNA MER1_type 1 219 0 826 286 4 8 chr5 154832941 154833196 -44796954 - L1MEc LINE L1 -5645 751 498 368 196 20 39 chr5 154833223 154833325 -44796825 + AluJb SINE Alu 193 292 -10 398 281 100 55 chr5 154833336 154834005 -44796145 - L1MEc LINE L1 -2201 4014 3316 22 0 0 0 chr5 154834037 154834059 -44796091 + AT_rich Low_complexity Low_complexity 1 22 0 610 275 86 33 chr5 154834150 154834482 -44795668 + MLT1H1 LTR MaLR 20 385 -205 1131 185 0 37 chr5 154834484 154834700 -44795450 - MER63A DNA MER1_type -2 208 1 241 229 0 16 chr5 154834758 154834819 -44795331 + MLT1H1 LTR MaLR 536 595 0 674 321 85 24 chr5 154834833 154835705 -44794445 - L1MEc LINE L1 -4095 2301 1357 1067 139 5 21 chr5 154835705 154835892 -44794258 - L1PB1 LINE L1 -2 6149 5966 674 321 85 24 chr5 154835892 154836026 -44794124 - L1MEc LINE L1 -5039 1357 1233 1010 201 122 58 chr5 154836136 154836479 -44793671 + MLT1A1 LTR MaLR 1 365 0 379 358 57 25 chr5 154836585 154836867 -44793283 - L1MEc LINE L1 -5298 907 617 4349 143 20 17 chr5 154837053 154837817 -44792333 - L1MA5 LINE L1 0 6300 5535 867 118 0 8 chr5 154837828 154837955 -44792195 + FLAM_C SINE Alu 10 135 -8 1547 159 20 17 chr5 154837956 154838251 -44791899 - L1M2 LINE L1 -4234 2615 2320 250 135 0 0 chr5 154838251 154838288 -44791862 - tRNA-Leu-TTG tRNA tRNA -48 38 2 21 36 0 0 chr5 154838889 154838917 -44791233 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 154839398 154839419 -44790731 + AT_rich Low_complexity Low_complexity 1 21 0 701 167 129 0 chr5 154839878 154840064 -44790086 - L1M4 LINE L1 -749 5397 5188 2878 110 27 29 chr5 154840065 154840226 -44789924 - L1PA15 LINE L1 -227 5938 5778 195 42 0 0 chr5 154840226 154840250 -44789900 + (TATTG)n Simple_repeat Simple_repeat 2 25 0 2172 94 3 0 chr5 154840250 154840537 -44789613 - AluSq SINE Alu -25 288 1 2878 110 27 29 chr5 154840537 154840863 -44789287 - L1PA15 LINE L1 -385 5780 5451 1449 133 0 58 chr5 154840863 154841103 -44789047 - AluSx SINE Alu -86 226 1 764 159 0 0 chr5 154841103 154841260 -44788890 - L1PA15 LINE L1 -815 5331 5175 1843 157 32 0 chr5 154841263 154841607 -44788543 - L1MA2 LINE L1 0 6304 5950 15484 27 6 0 chr5 154841620 154844228 -44785922 - L1PA3 LINE L1 -11 6144 3531 1717 193 3 7 chr5 154844231 154844536 -44785614 - AluJo SINE Alu -8 304 1 6790 137 15 32 chr5 154844536 154844706 -44785444 - L1MA2 LINE L1 -355 5949 5778 2117 112 14 0 chr5 154844706 154845002 -44785148 - AluSp SINE Alu -13 300 1 6790 137 15 32 chr5 154845002 154846631 -44783519 - L1MA2 LINE L1 -526 5778 4185 930 120 0 0 chr5 154846631 154846764 -44783386 - FLAM_C SINE Alu 0 133 1 6790 137 15 32 chr5 154846764 154846997 -44783153 - L1MA2 LINE L1 -2119 4185 3950 4733 118 4 4 chr5 154846999 154847711 -44782439 - L1PB2 LINE L1 -7 6144 5433 1421 207 91 0 chr5 154848050 154848436 -44781714 + MER63C DNA MER1_type 52 472 -458 5587 146 30 20 chr5 154848466 154850197 -44779953 - L1PB1 LINE L1 0 7570 5836 3409 83 16 0 chr5 154850201 154850647 -44779503 - MLT2A2 LTR ERVL 0 453 1 41095 75 10 13 chr5 154850647 154854435 -44775715 - HERVL-A2 LTR ERVL 0 5654 1835 322 154 0 0 chr5 154854435 154854487 -44775663 - L1MA2 LINE L1 -2319 3827 3776 41095 75 10 13 chr5 154854487 154856317 -44773833 - HERVL-A2 LTR ERVL -3819 1835 1 3394 87 16 0 chr5 154856317 154856763 -44773387 - MLT2A2 LTR ERVL 0 453 1 8246 180 30 10 chr5 154856763 154859371 -44770779 - L1PB1 LINE L1 -1729 5836 3173 2230 109 0 10 chr5 154859371 154859673 -44770477 - AluSc SINE Alu -10 299 1 8246 180 30 10 chr5 154859673 154859795 -44770355 - L1PB1 LINE L1 -4392 3173 3055 * 10912 184 50 10 chr5 154859789 154860043 -44770107 - L1PB1 LINE L1 -5495 2070 1828 306 50 0 0 chr5 154860043 154860083 -44770067 + (TC)n Simple_repeat Simple_repeat 1 40 0 10912 184 50 10 chr5 154860083 154861803 -44768347 - L1PB1 LINE L1 -5737 1828 17 5052 201 24 8 chr5 154861810 154862914 -44767236 - L1P LINE L1 -971 5175 4055 2519 251 52 24 chr5 154862908 154863025 -44767125 - L1MEc LINE L1 -3360 2855 2743 * 2054 174 11 6 chr5 154863025 154863388 -44766762 + MLT1A1 LTR MaLR 1 365 0 2519 251 52 24 chr5 154863388 154864213 -44765937 - L1MEc LINE L1 -3472 2743 1915 762 239 137 51 chr5 154864213 154864643 -44765507 + MLT1C LTR MaLR 1 467 0 2519 251 52 24 chr5 154864643 154864830 -44765320 - L1MEc LINE L1 -4300 1915 1735 2196 116 0 0 chr5 154864990 154865293 -44764857 + AluSc SINE Alu 1 303 -6 195 347 74 25 chr5 154865294 154865415 -44764735 - L3 LINE CR1 -481 1096 970 973 179 24 6 chr5 154865416 154865584 -44764566 - AluJo SINE Alu -22 290 120 191 200 0 17 chr5 154866244 154866304 -44763846 + (TA)n Simple_repeat Simple_repeat 2 60 0 25 31 0 0 chr5 154866433 154866465 -44763685 + AT_rich Low_complexity Low_complexity 1 32 0 365 314 118 18 chr5 154867129 154867349 -44762801 + HAL1b LINE L1 15 256 -1092 256 359 39 8 chr5 154867437 154867565 -44762585 + L3 LINE CR1 977 1108 -469 720 131 19 0 chr5 154867615 154867722 -44762428 + AluJo SINE Alu 32 140 -172 1173 222 8 12 chr5 154867722 154867970 -44762180 + AluJo SINE Alu 51 297 -15 2020 118 0 39 chr5 154869033 154869381 -44760769 + AluSx SINE Alu 2 312 0 664 154 0 51 chr5 154869389 154869506 -44760644 + FLAM_C SINE Alu 5 115 -18 357 24 0 0 chr5 154869509 154869551 -44760599 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 396 157 12 24 chr5 154869552 154869635 -44760515 - L1MC5 LINE L1 -49 7912 7831 977 26 0 0 chr5 154869954 154870105 -44760045 + L1PA5 LINE L1 6023 6173 0 21 57 0 0 chr5 154874019 154874054 -44756096 + AT_rich Low_complexity Low_complexity 1 35 0 922 106 0 8 chr5 154874817 154874949 -44755201 - FLAM_C SINE Alu -2 131 1 192 340 0 0 chr5 154875214 154875267 -44754883 + L2 LINE L2 3220 3272 0 715 272 89 14 chr5 154878135 154878573 -44751577 - L1M4 LINE L1 -2563 3583 3113 1430 219 86 37 chr5 154878578 154878961 -44751189 - Charlie1a DNA MER1_type -1053 402 1 1462 240 64 102 chr5 154878961 154879312 -44750838 - L1MC5 LINE L1 -797 7147 6784 530 215 9 0 chr5 154879312 154879419 -44750731 - L1MD2 LINE L1 -10 6349 6242 1462 240 64 102 chr5 154879419 154880155 -44749995 - L1MC5 LINE L1 -1160 6784 6074 248 240 27 13 chr5 154880169 154880244 -44749906 - L1MC5 LINE L1 -1897 5894 5819 268 221 94 74 chr5 154880267 154880321 -44749829 - L1MC5 LINE L1 -956 5173 5122 2263 114 0 0 chr5 154880321 154880619 -44749531 - AluSx SINE Alu -14 298 1 268 221 94 74 chr5 154880619 154880713 -44749437 - L1MC5 LINE L1 -1007 5122 5022 760 202 101 0 chr5 154880716 154880894 -44749256 + MER3 DNA MER1_type 1 196 -13 1045 268 65 19 chr5 154880895 154881369 -44748781 - L1MC5 LINE L1 -1103 5026 4531 233 259 49 0 chr5 154881379 154881460 -44748690 - L1MC5 LINE L1 -1558 4571 4487 2660 33 0 0 chr5 154881460 154881763 -44748387 - AluY SINE Alu -8 303 1 1211 144 0 0 chr5 154881884 154882057 -44748093 + AluSg/x SINE Alu 124 296 -16 2541 54 0 0 chr5 154882057 154882354 -44747796 + AluY SINE Alu 1 297 -14 1074 281 56 30 chr5 154882374 154882532 -44747618 - L1MC5 LINE L1 -1796 4333 4181 765 171 0 50 chr5 154882532 154882672 -44747478 - FLAM_C SINE Alu 0 133 1 1074 281 56 30 chr5 154882672 154883135 -44747015 - L1MC5 LINE L1 -1948 4181 3696 21 0 0 0 chr5 154883154 154883175 -44746975 + AT_rich Low_complexity Low_complexity 1 21 0 695 148 49 0 chr5 154883178 154883300 -44746850 + L1PA13 LINE L1 6030 6157 -6 210 118 0 0 chr5 154883303 154883337 -44746813 + (CA)n Simple_repeat Simple_repeat 2 35 0 562 266 44 51 chr5 154883338 154883463 -44746687 - L1MC5 LINE L1 -2429 3700 3576 1676 168 70 48 chr5 154883463 154883820 -44746330 - MLT1A1 LTR MaLR 0 365 1 562 266 44 51 chr5 154883820 154883987 -44746163 - L1MC5 LINE L1 -2553 3576 3410 349 215 32 11 chr5 154884111 154884204 -44745946 - L1ME3A LINE L1 -291 5879 5785 * 619 260 28 44 chr5 154884202 154884563 -44745587 - L1MC5 LINE L1 -3419 2710 2356 427 270 101 7 chr5 154884550 154884698 -44745452 - L1MC5 LINE L1 -4704 1606 1445 * 369 287 25 8 chr5 154884717 154884839 -44745311 - L1MC5 LINE L1 -5103 1026 903 588 248 106 0 chr5 154884897 154885038 -44745112 - FRAM SINE Alu -20 156 1 341 330 81 86 chr5 154885066 154885599 -44744551 - L1MC5 LINE L1 -5292 827 298 909 83 21 7 chr5 154885614 154885759 -44744391 + (TTTC)n Simple_repeat Simple_repeat 2 148 0 2093 108 0 4 chr5 154885762 154886041 -44744109 - AluSg1 SINE Alu -31 278 1 965 157 6 13 chr5 154886689 154886848 -44743302 + AluSg/x SINE Alu 134 291 -19 2286 119 0 3 chr5 154887401 154887712 -44742438 + AluSx SINE Alu 1 310 -2 281 341 162 15 chr5 154887920 154888573 -44741577 - L2 LINE L2 -949 2365 1617 216 86 0 0 chr5 154888597 154888632 -44741518 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1861 146 4 0 chr5 154888637 154888904 -44741246 - AluJb SINE Alu -35 277 10 6247 129 29 23 chr5 154889463 154891038 -44739112 + L1MA6 LINE L1 4220 5809 -491 189 0 0 0 chr5 154891038 154891059 -44739091 + (TA)n Simple_repeat Simple_repeat 1 21 0 6247 129 29 23 chr5 154891059 154891554 -44738596 + L1MA6 LINE L1 5809 6300 0 406 98 77 0 chr5 154891585 154891662 -44738488 + L1MA7 LINE L1 5771 5856 -299 5327 261 79 40 chr5 154891679 154895751 -44734399 - L1MDa LINE L1 -1229 4851 564 2191 137 97 8 chr5 154895762 154896155 -44733995 - MSTA LTR MaLR 0 428 1 3285 156 6 18 chr5 154896175 154896721 -44733429 - MSTA-int LTR MaLR -13 1638 1100 475 83 0 0 chr5 154896721 154896793 -44733357 + AluSp/q SINE Alu 240 311 -2 1838 167 51 6 chr5 154896793 154897146 -44733004 - MSTA-int LTR MaLR -1282 369 1 2640 107 58 22 chr5 154897146 154897559 -44732591 - MSTA LTR MaLR 0 428 1 1228 282 47 50 chr5 154897559 154898115 -44732035 - L1MDa LINE L1 -5490 580 27 28 0 0 47 chr5 154898183 154898205 -44731945 + AT_rich Low_complexity Low_complexity 1 22 -19 11805 131 6 7 chr5 154898205 154899705 -44730445 - L1PA11 LINE L1 -2 6172 4648 2757 97 8 0 chr5 154899705 154900077 -44730073 + THE1C LTR MaLR 1 375 0 11805 131 6 7 chr5 154900077 154901246 -44728904 - L1PA11 LINE L1 -1526 4648 3479 28 0 0 47 chr5 154901246 154901266 -44728884 + AT_rich Low_complexity Low_complexity 22 41 0 1877 123 97 0 chr5 154901689 154901998 -44728152 + MER44D DNA MER2_type 1 609 0 267 248 73 22 chr5 154902065 154902202 -44727948 + L1ME LINE L1 5739 5882 -239 27 49 0 0 chr5 154902698 154902739 -44727411 + AT_rich Low_complexity Low_complexity 1 41 0 1036 135 0 0 chr5 154903371 154903534 -44726616 + Tigger7 DNA MER2_type 2288 2450 -37 1456 192 12 0 chr5 154903555 154903810 -44726340 + AluJb SINE Alu 35 292 -20 235 286 220 0 chr5 154904685 154904776 -44725374 + MIR SINE MIR 94 204 -58 244 260 219 10 chr5 154905582 154905678 -44724472 - MIR SINE MIR -58 204 89 616 348 18 13 chr5 154905756 154905980 -44724170 - L3 LINE CR1 -947 630 406 228 367 57 14 chr5 154906075 154906288 -44723862 - L3 LINE CR1 -1213 364 49 2283 59 35 7 chr5 154906314 154906601 -44723549 - AluY SINE Alu -16 295 1 25 0 0 0 chr5 154906677 154906702 -44723448 + AT_rich Low_complexity Low_complexity 1 25 0 226 234 47 16 chr5 154907779 154907843 -44722307 - L2 LINE L2 -9 3304 3239 601 284 108 10 chr5 154908226 154908430 -44721720 - MIR SINE MIR -36 226 3 243 295 0 0 chr5 154910853 154910914 -44719236 + CT-rich Low_complexity Low_complexity 3 63 0 372 299 113 97 chr5 154910914 154911258 -44718892 - L1M2 LINE L1 -5472 1377 1017 249 119 0 0 chr5 154911258 154911300 -44718850 + (CTG)n Simple_repeat Simple_repeat 2 43 0 372 299 113 97 chr5 154911300 154911566 -44718584 - L1M2 LINE L1 -5832 1017 757 182 146 0 24 chr5 154916131 154916172 -44713978 + (CATATA)n Simple_repeat Simple_repeat 3 42 0 242 238 63 0 chr5 154916287 154916350 -44713800 - MIR SINE MIR -120 142 76 1089 177 9 44 chr5 154916565 154916791 -44713359 - AluJo SINE Alu -9 303 86 2463 87 0 0 chr5 154917087 154917387 -44712763 - AluSc SINE Alu -8 301 2 1925 106 85 0 chr5 154918932 154919214 -44710936 - AluSq SINE Alu -7 306 1 1739 212 98 62 chr5 154919302 154919902 -44710248 - MLT1E3 LTR MaLR 0 624 3 23 33 0 0 chr5 154920210 154920240 -44709910 + AT_rich Low_complexity Low_complexity 1 30 0 1952 142 0 0 chr5 154920695 154921004 -44709146 + AluSx SINE Alu 1 309 0 190 302 57 0 chr5 154921248 154921301 -44708849 - L2 LINE L2 -74 3239 3184 2367 92 0 0 chr5 154924776 154925079 -44705071 + AluSc SINE Alu 1 303 -6 2225 123 0 0 chr5 154925723 154926024 -44704126 + AluSx SINE Alu 6 306 -6 225 94 0 0 chr5 154926081 154926113 -44704037 + (TTCC)n Simple_repeat Simple_repeat 1 32 0 258 32 0 0 chr5 154926114 154926145 -44704005 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 201 195 0 0 chr5 154927199 154927240 -44702910 + (TG)n Simple_repeat Simple_repeat 1 41 0 272 146 36 0 chr5 154927397 154927452 -44702698 + GA-rich Low_complexity Low_complexity 2 58 0 703 285 44 13 chr5 154927898 154928126 -44702024 - MIR SINE MIR 0 262 28 516 295 98 34 chr5 154929132 154929366 -44700784 + MIR SINE MIR 3 251 -11 2248 96 0 0 chr5 154929372 154929663 -44700487 - AluY SINE Alu -20 291 1 2500 57 7 0 chr5 154930166 154930465 -44699685 - AluY SINE Alu -10 301 1 2604 288 67 17 chr5 154930746 154931864 -44698286 - HAL1 LINE L1 -702 1805 632 1049 283 45 50 chr5 154931924 154932005 -44698145 - MLT1I LTR MaLR -8 401 321 1841 66 13 0 chr5 154932005 154932231 -44697919 + AluY SINE Alu 83 311 0 1049 283 45 50 chr5 154932231 154932552 -44697598 - MLT1I LTR MaLR -88 321 1 693 252 87 85 chr5 154932656 154933105 -44697045 - HAL1 LINE L1 -2028 479 30 308 254 53 26 chr5 154933147 154933261 -44696889 - L1M4 LINE L1 -2931 3215 3099 842 292 65 19 chr5 154933463 154933903 -44696247 - MLT1J LTR MaLR -19 492 1 23 0 0 0 chr5 154934166 154934189 -44695961 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 154935164 154935192 -44694958 + AT_rich Low_complexity Low_complexity 1 28 0 1646 175 3 106 chr5 154935288 154935676 -44694474 + MER7A DNA MER2_type 1 346 0 415 326 67 32 chr5 154936349 154936387 -44693763 + L1MEd LINE L1 447 482 -5637 354 23 0 0 chr5 154936387 154936430 -44693720 + (TG)n Simple_repeat Simple_repeat 2 44 0 683 217 0 0 chr5 154936433 154936548 -44693602 - FLAM_A SINE Alu -18 115 1 415 326 67 32 chr5 154936548 154936879 -44693271 + L1MEd LINE L1 483 833 -5286 948 249 122 33 chr5 154936925 154937286 -44692864 + HAL1b LINE L1 253 645 -703 359 303 180 0 chr5 154937323 154937534 -44692616 + HAL1b LINE L1 460 708 -640 311 250 45 102 chr5 154937545 154937721 -44692429 + HAL1 LINE L1 24 189 -2318 680 326 92 27 chr5 154937824 154938303 -44691847 + HAL1 LINE L1 319 828 -1679 * 4977 161 40 16 chr5 154938298 154938316 -44691834 + L1MB7 LINE L1 5119 5135 -1049 2403 82 0 3 chr5 154938316 154938610 -44691540 + AluSx SINE Alu 3 295 -17 4977 161 40 16 chr5 154938610 154939639 -44690511 + L1MB7 LINE L1 5135 6183 -1 496 283 112 36 chr5 154939644 154940036 -44690114 + HAL1 LINE L1 1022 1443 -1064 340 122 0 204 chr5 154940075 154940173 -44689977 - MER20 DNA MER1_type -138 81 4 886 277 182 31 chr5 154940222 154940990 -44689160 + HAL1 LINE L1 1515 2398 -109 25 0 0 0 chr5 154941031 154941056 -44689094 + AT_rich Low_complexity Low_complexity 1 25 0 2262 87 3 0 chr5 154941064 154941353 -44688797 + AluSq SINE Alu 1 290 -23 265 264 61 31 chr5 154941364 154941527 -44688623 + HAL1b LINE L1 732 899 -449 275 225 193 25 chr5 154941575 154941834 -44688316 + HAL1b LINE L1 1022 1333 -15 2299 103 0 0 chr5 154941834 154942136 -44688014 - AluSx SINE Alu -2 310 9 275 225 193 25 chr5 154942136 154942156 -44687994 + HAL1b LINE L1 1333 1348 0 243 290 140 0 chr5 154945718 154945825 -44684325 - L2 LINE L2 0 3313 3192 2080 136 0 3 chr5 154945977 154946278 -44683872 - AluSx SINE Alu -12 300 1 2297 123 0 0 chr5 154946374 154946674 -44683476 + AluSx SINE Alu 1 300 -12 2176 112 7 0 chr5 154947101 154947396 -44682754 + AluSq SINE Alu 1 297 -16 362 278 78 0 chr5 154953247 154953362 -44676788 - L1ME2 LINE L1 -10 6154 6031 1989 133 77 6 chr5 154953621 154953958 -44676192 - MER46B DNA MER2_type 0 236 1 22 0 0 0 chr5 154954014 154954036 -44676114 + AT_rich Low_complexity Low_complexity 1 22 0 6701 164 73 87 chr5 154954267 154955333 -44674817 - L1MDa LINE L1 -2890 3650 2571 2246 113 7 0 chr5 154955333 154955643 -44674507 - AluSq SINE Alu -1 312 1 6701 164 73 87 chr5 154955643 154956974 -44673176 - L1MDa LINE L1 -3969 2571 1314 2235 108 10 7 chr5 154956974 154957280 -44672870 - AluSx SINE Alu -5 307 1 6701 164 73 87 chr5 154957280 154957516 -44672634 - L1MDa LINE L1 -5226 1314 1076 560 272 89 41 chr5 154957510 154957848 -44672302 + L1ME3A LINE L1 5617 5970 -200 * 683 211 73 0 chr5 154958126 154958249 -44671901 + FLAM_A SINE Alu 1 132 -1 338 220 0 0 chr5 154958275 154958334 -44671816 + MIR SINE MIR 31 89 -173 598 157 61 9 chr5 154958334 154958449 -44671701 + MLT1A1 LTR MaLR 40 160 -205 * 1136 210 31 19 chr5 154958447 154958704 -44671446 + MLT1A1 LTR MaLR 106 365 0 461 259 114 0 chr5 154958704 154958835 -44671315 + MIR SINE MIR 85 230 -32 546 311 83 76 chr5 154958890 154959121 -44671029 + HAL1 LINE L1 1059 1287 -1220 1812 145 21 35 chr5 154959121 154959411 -44670739 + AluSx SINE Alu 1 286 -26 546 311 83 76 chr5 154959411 154959990 -44670160 + HAL1 LINE L1 1287 1898 -609 25 31 0 0 chr5 154960275 154960307 -44669843 + AT_rich Low_complexity Low_complexity 1 32 0 1343 252 103 18 chr5 154960509 154961005 -44669145 + MER90 LTR ERV1 73 610 -4 2327 74 0 0 chr5 154961068 154961377 -44668773 + AluSp SINE Alu 1 309 0 2056 143 5 75 chr5 154961705 154962119 -44668031 - MLT1B LTR MaLR -3 387 3 1891 268 32 6 chr5 154962195 154962873 -44667277 + L1ME3A LINE L1 5466 6161 -9 330 310 99 86 chr5 154963564 154964254 -44665896 + L1M2 LINE L1 508 1206 -5643 2422 263 69 27 chr5 154966364 154967752 -44662398 - L1ME3A LINE L1 -14 6225 4774 * 6186 150 20 5 chr5 154967749 154968976 -44661174 - L1MC1 LINE L1 0 6333 5094 4032 269 83 27 chr5 154968974 154970803 -44659347 - L1MDa LINE L1 -1432 4783 2774 * 2068 108 4 0 chr5 154970803 154971081 -44659069 - AluSg SINE Alu -31 279 1 4032 269 83 27 chr5 154971081 154971737 -44658413 - L1MDa LINE L1 -3441 2774 2156 333 355 17 39 chr5 154971800 154972034 -44658116 - L1MDa LINE L1 -4310 2086 1858 639 270 95 42 chr5 154972051 154972154 -44657996 - L1MDa LINE L1 -4592 1804 1708 2151 137 0 3 chr5 154972154 154972454 -44657696 + AluSx SINE Alu 1 299 -13 639 270 95 42 chr5 154972454 154973086 -44657064 - L1MDa LINE L1 -4688 1708 1030 1866 141 0 7 chr5 154974034 154974347 -44655803 - AluJo SINE Alu 0 311 1 1874 127 19 60 chr5 154974890 154975204 -44654946 - AluSx SINE Alu -11 301 1 21 57 0 0 chr5 154975741 154975776 -44654374 + AT_rich Low_complexity Low_complexity 1 35 0 33 43 0 0 chr5 154976131 154976178 -44653972 + AT_rich Low_complexity Low_complexity 1 47 0 21 71 0 0 chr5 154980590 154980632 -44649518 + AT_rich Low_complexity Low_complexity 1 42 0 917 270 25 13 chr5 154981261 154981498 -44648652 - MIR SINE MIR -3 259 20 22 80 0 0 chr5 154981591 154981641 -44648509 + AT_rich Low_complexity Low_complexity 1 50 0 21 36 0 0 chr5 154982114 154982142 -44648008 + AT_rich Low_complexity Low_complexity 1 28 0 1966 152 3 7 chr5 154982252 154982554 -44647596 + AluJo SINE Alu 1 301 -11 1892 214 32 11 chr5 154982554 154983021 -44647129 + L1M4 LINE L1 4261 4737 -1409 2572 33 0 3 chr5 154983663 154983962 -44646188 - AluY SINE Alu -13 298 1 1513 176 56 28 chr5 154983981 154984265 -44645885 - AluJo SINE Alu -20 292 1 5444 222 78 37 chr5 154984265 154984666 -44645484 - L1M4 LINE L1 -2293 4351 3968 549 90 13 0 chr5 154984666 154984744 -44645406 - MADE1 DNA Mariner 0 80 2 5444 222 78 37 chr5 154984744 154986708 -44643442 - L1M4 LINE L1 -2676 3968 1836 19631 38 43 2 chr5 154986708 154989862 -44640288 + L1PA4 LINE L1 2968 6154 -1 5444 222 78 37 chr5 154989862 154990334 -44639816 - L1M4 LINE L1 -4808 1836 1385 214 106 43 21 chr5 154990334 154990381 -44639769 + CT-rich Low_complexity Low_complexity 4 51 0 2498 59 0 3 chr5 154990384 154990688 -44639462 - AluY SINE Alu -8 303 1 306 0 0 0 chr5 154990689 154990723 -44639427 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 1381 248 62 29 chr5 154990750 154991166 -44638984 - L1M4 LINE L1 -6105 437 8 1571 193 32 3 chr5 154992464 154992749 -44637401 - AluJo SINE Alu -19 293 1 2532 58 0 3 chr5 154993257 154993567 -44636583 - AluY SINE Alu -1 310 2 507 320 0 0 chr5 154995049 154995177 -44634973 - L2 LINE L2 0 3272 3145 1732 152 7 40 chr5 154995994 154996291 -44633859 + AluJb SINE Alu 1 287 -25 2813 3 0 0 chr5 154996914 154997216 -44632934 + AluYa5 SINE Alu 1 302 -9 196 180 40 0 chr5 155002594 155002644 -44627506 - L2 LINE L2 -1 3312 3261 2298 84 3 17 chr5 155003238 155003536 -44626614 + AluSp SINE Alu 5 298 -15 305 282 97 90 chr5 155004488 155004900 -44625250 + L1M2 LINE L1 549 963 -5886 372 326 56 9 chr5 155007274 155007489 -44622661 - L1MC5 LINE L1 -255 7706 7482 1989 171 90 13 chr5 155007494 155007962 -44622188 + L1MC2 LINE L1 5820 6323 -21 1898 92 0 16 chr5 155007966 155008236 -44621914 + AluSc SINE Alu 36 301 0 303 329 48 10 chr5 155008304 155008593 -44621557 - L1MC4 LINE L1 -26 8016 7717 368 238 81 0 chr5 155008748 155008902 -44621248 - L1MC4 LINE L1 -427 7615 7345 1475 197 7 23 chr5 155010665 155010994 -44619156 + AluJb SINE Alu 8 312 0 2548 68 0 0 chr5 155011363 155011670 -44618480 + AluY SINE Alu 1 307 -4 22 0 0 0 chr5 155016099 155016121 -44614029 + AT_rich Low_complexity Low_complexity 1 22 0 180 346 37 0 chr5 155016904 155016985 -44613165 - L2 LINE L2 0 3313 3230 2194 113 7 0 chr5 155017342 155017635 -44612515 + AluSx SINE Alu 1 295 -17 2218 100 7 3 chr5 155017764 155018065 -44612085 + AluSx SINE Alu 1 302 -10 368 313 37 34 chr5 155018076 155018228 -44611922 + MIR SINE MIR 39 191 -67 2048 129 3 10 chr5 155018237 155018581 -44611569 + AluSc SINE Alu 1 342 0 1895 135 14 3 chr5 155018949 155019255 -44610895 + AluSx SINE Alu 1 309 0 539 305 157 31 chr5 155019268 155019720 -44610430 + L2 LINE L2 1719 2227 -1087 215 295 13 51 chr5 155019707 155019785 -44610365 + MIR SINE MIR 68 142 -120 * 203 260 0 20 chr5 155019812 155019862 -44610288 + MIR SINE MIR 101 149 -113 21 0 0 31 chr5 155019900 155019915 -44610235 + AT_rich Low_complexity Low_complexity 1 15 -16 2227 124 0 0 chr5 155019915 155020214 -44609936 - AluSx SINE Alu -13 299 1 21 0 0 31 chr5 155020214 155020230 -44609920 + AT_rich Low_complexity Low_complexity 15 31 0 657 368 63 17 chr5 155020582 155021151 -44608999 + L2 LINE L2 2454 3057 -215 330 294 59 37 chr5 155021727 155021863 -44608287 - L2 LINE L2 0 3272 3134 2270 106 10 0 chr5 155022103 155022405 -44607745 - AluSg SINE Alu -5 305 1 2157 71 0 4 chr5 155022677 155022958 -44607192 + AluSx SINE Alu 1 280 -32 189 0 111 0 chr5 155022959 155022995 -44607155 + A-rich Low_complexity Low_complexity 1 40 0 2308 64 3 14 chr5 155023553 155023849 -44606301 - AluSc SINE Alu -16 293 1 2807 19 0 0 chr5 155024619 155024934 -44605216 - AluYb8 SINE Alu -3 315 1 521 119 119 18 chr5 155026029 155026138 -44604012 - FLAM_C SINE Alu -13 130 11 22 56 0 0 chr5 155026657 155026693 -44603457 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr5 155027492 155027522 -44602628 + AT_rich Low_complexity Low_complexity 1 30 0 819 207 14 0 chr5 155028064 155028209 -44601941 - AluJo SINE Alu -18 284 138 442 240 34 6 chr5 155028212 155028387 -44601763 + CT-rich Low_complexity Low_complexity 1 180 0 634 171 65 0 chr5 155028388 155028511 -44601639 - AluJo SINE Alu -181 131 1 1164 275 96 39 chr5 155028661 155029764 -44600386 - L1M3 LINE L1 -614 5557 4383 1620 112 0 0 chr5 155029877 155030100 -44600050 - AluSg/x SINE Alu 0 312 90 844 177 29 63 chr5 155030100 155030275 -44599875 - AluJo SINE Alu -143 169 1 2056 114 37 10 chr5 155030290 155030588 -44599562 + AluSx SINE Alu 1 306 -6 2269 110 7 0 chr5 155030772 155031071 -44599079 - AluSq SINE Alu -12 301 1 1644 205 0 0 chr5 155031155 155031438 -44598712 - AluJb SINE Alu -16 296 14 445 294 75 60 chr5 155031472 155031697 -44598453 - L1M3 LINE L1 -3114 3032 2812 2298 103 30 0 chr5 155031697 155031999 -44598151 + AluSx SINE Alu 2 312 0 445 294 75 60 chr5 155031999 155032302 -44597848 - L1M3 LINE L1 -3334 2812 2492 2139 116 0 3 chr5 155032302 155032594 -44597556 + AluSx SINE Alu 2 292 -20 445 294 75 60 chr5 155032594 155032635 -44597515 - L1M3 LINE L1 -3654 2492 2453 1590 214 60 58 chr5 155032787 155033288 -44596862 + MLT1D LTR MaLR 2 503 -2 356 183 85 12 chr5 155033383 155033457 -44596693 + FLAM_A SINE Alu 36 118 -184 462 18 0 0 chr5 155033457 155033512 -44596638 + (CATA)n Simple_repeat Simple_repeat 2 56 0 306 330 54 22 chr5 155033970 155034439 -44595711 - L1ME3 LINE L1 -296 6260 5772 380 286 88 42 chr5 155034464 155034681 -44595469 - L1ME3 LINE L1 -842 5698 5472 480 389 8 4 chr5 155034813 155035052 -44595098 - L1ME3 LINE L1 -1908 4632 4393 23 54 0 0 chr5 155035209 155035246 -44594904 + AT_rich Low_complexity Low_complexity 1 37 0 254 129 50 20 chr5 155035419 155035520 -44594630 + (TA)n Simple_repeat Simple_repeat 1 104 0 1100 306 113 29 chr5 155035520 155035556 -44594594 - L1ME3 LINE L1 -2932 3608 3576 2123 94 3 31 chr5 155035556 155035874 -44594276 - AluY SINE Alu -2 309 1 1100 306 113 29 chr5 155035874 155036810 -44593340 - L1ME3 LINE L1 -2964 3576 2525 651 301 132 42 chr5 155037326 155037896 -44592254 - L1ME3 LINE L1 -967 1934 1229 192 40 0 0 chr5 155038654 155038679 -44591471 + (TC)n Simple_repeat Simple_repeat 2 26 0 1906 155 3 17 chr5 155038679 155038970 -44591180 - AluSx SINE Alu -25 287 1 311 242 0 74 chr5 155039067 155039162 -44590988 - L1MEd LINE L1 -4947 1172 1085 417 246 52 18 chr5 155039163 155039296 -44590854 + MLT1G LTR MaLR 1 134 -421 * 855 266 99 17 chr5 155039290 155039590 -44590560 + MLT1G LTR MaLR 237 583 -7 307 159 43 0 chr5 155039755 155039824 -44590326 + L1MD3 LINE L1 6960 7031 -964 353 265 30 60 chr5 155039844 155040010 -44590140 - L1MEd LINE L1 -5109 1010 850 2287 102 10 3 chr5 155040551 155040856 -44589294 - AluSg SINE Alu -3 307 1 2093 92 29 0 chr5 155040898 155041170 -44588980 - AluSq SINE Alu -33 280 1 24 0 0 0 chr5 155041172 155041196 -44588954 + AT_rich Low_complexity Low_complexity 1 24 0 2145 130 0 0 chr5 155041335 155041636 -44588514 - AluSx SINE Alu -11 301 1 2768 234 85 16 chr5 155042278 155043236 -44586914 + L1MD3 LINE L1 6960 7983 -12 21 71 0 0 chr5 155043564 155043606 -44586544 + AT_rich Low_complexity Low_complexity 1 42 0 2408 110 0 0 chr5 155043652 155043961 -44586189 - AluSc SINE Alu 0 309 1 1975 127 25 51 chr5 155044310 155044625 -44585525 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr5 155044765 155044791 -44585359 + AT_rich Low_complexity Low_complexity 1 26 0 1007 174 0 0 chr5 155045146 155045301 -44584849 - FRAM SINE Alu -18 158 4 2119 134 0 0 chr5 155045782 155046081 -44584069 - AluSx SINE Alu -13 299 1 2440 90 0 6 chr5 155046227 155046538 -44583612 + AluSq SINE Alu 1 309 -4 535 348 56 16 chr5 155050488 155050738 -44579412 - MIR SINE MIR -1 261 2 470 220 55 9 chr5 155050971 155051080 -44579070 - MIR SINE MIR -71 137 24 354 307 50 21 chr5 155051369 155051509 -44578641 - L1ME3A LINE L1 -238 5932 5789 2395 212 30 6 chr5 155051509 155052042 -44578108 - MER90 LTR ERV1 0 614 69 698 269 34 49 chr5 155052110 155052265 -44577885 - L1ME3A LINE L1 -454 5708 5552 2131 120 3 0 chr5 155052265 155052557 -44577593 + AluSg SINE Alu 1 293 -17 698 269 34 49 chr5 155052557 155052847 -44577303 - L1ME3A LINE L1 -610 5552 5270 1549 178 45 14 chr5 155053132 155053418 -44576732 + AluJo SINE Alu 1 295 -17 1621 169 61 11 chr5 155053480 155053841 -44576309 - L1MA8 LINE L1 -1 6290 5912 2187 116 0 0 chr5 155053843 155054179 -44575971 + L1MA8 LINE L1 5563 5898 -414 1118 253 36 47 chr5 155054598 155054982 -44575168 + MER92A LTR ERV1 28 407 -5 1674 213 58 20 chr5 155055288 155055738 -44574412 + MLT1C LTR MaLR 1 467 0 239 294 43 11 chr5 155055893 155055985 -44574165 + MLT1H LTR MaLR 435 529 -20 756 238 43 50 chr5 155056040 155056321 -44573829 - L1MC4 LINE L1 -163 7879 7601 4985 111 3 4 chr5 155056411 155057168 -44572982 - L1PA14 LINE L1 -9 6152 5397 1110 237 45 35 chr5 155057156 155057531 -44572619 - L1MC4a LINE L1 -315 7493 7115 * 181 148 19 37 chr5 155057535 155057589 -44572561 + (TATATG)n Simple_repeat Simple_repeat 1 53 0 239 345 0 18 chr5 155057595 155057766 -44572384 - L1MC4a LINE L1 -1232 6576 6409 26 64 0 0 chr5 155058121 155058168 -44571982 + AT_rich Low_complexity Low_complexity 1 47 0 1467 246 121 34 chr5 155062141 155062874 -44567276 + L1ME3 LINE L1 5336 6132 -30 846 334 22 18 chr5 155062958 155063326 -44566824 + L2 LINE L2 2699 3070 -243 355 209 70 12 chr5 155063374 155063460 -44566690 - MLT1D LTR MaLR -414 91 1 625 271 15 30 chr5 155063492 155063695 -44566455 + L2 LINE L2 3114 3313 0 400 282 144 11 chr5 155064265 155064439 -44565711 - L2 LINE L2 0 3313 3117 1759 309 153 8 chr5 155064446 155065243 -44564907 - L2 LINE L2 -555 2759 1847 438 361 129 26 chr5 155065901 155066242 -44563908 - L2 LINE L2 -2 3270 2895 292 216 48 0 chr5 155066459 155066584 -44563566 + (TATAA)n Simple_repeat Simple_repeat 1 131 0 287 292 67 42 chr5 155067074 155067194 -44562956 - MIR SINE MIR -66 142 20 2011 144 6 35 chr5 155067232 155067551 -44562599 - AluJo SINE Alu -2 310 1 390 297 27 9 chr5 155067601 155067712 -44562438 - L2 LINE L2 0 3313 3201 1327 208 96 0 chr5 155067835 155068148 -44562002 - L1ME1 LINE L1 -7 6159 5817 24 0 0 0 chr5 155068484 155068508 -44561642 + AT_rich Low_complexity Low_complexity 1 24 0 682 285 84 38 chr5 155068590 155069271 -44560879 + L1MEd LINE L1 537 1248 -4871 28 0 0 0 chr5 155069409 155069437 -44560713 + AT_rich Low_complexity Low_complexity 1 28 0 2037 128 0 7 chr5 155069441 155069753 -44560397 + AluSx SINE Alu 5 314 0 1394 81 5 76 chr5 155069869 155070080 -44560070 + AluSp SINE Alu 96 291 -22 2011 169 13 5 chr5 155070180 155070553 -44559597 - L1MA9 LINE L1 -478 5834 5459 738 136 0 15 chr5 155070551 155070683 -44559467 + L1MA9 LINE L1 5818 5947 -365 * 2225 96 0 3 chr5 155070687 155071008 -44559142 + AluSx SINE Alu 1 312 0 285 267 40 0 chr5 155071016 155071117 -44559033 + L1MC4 LINE L1 7795 7899 -143 303 237 51 8 chr5 155071183 155071301 -44558849 + L1MC4 LINE L1 7918 8040 -2 2075 133 0 0 chr5 155071443 155071728 -44558422 + AluSx SINE Alu 1 285 -27 669 25 0 0 chr5 155071728 155071807 -44558343 + (TATAA)n Simple_repeat Simple_repeat 4 82 0 4067 266 87 71 chr5 155071819 155073611 -44556539 - L2 LINE L2 -1479 1835 16 530 233 129 37 chr5 155074978 155075098 -44555052 - MER5B DNA MER1_type 0 178 38 646 190 15 72 chr5 155075098 155075293 -44554857 - MER53 DNA DNA -3 186 3 530 233 129 37 chr5 155075293 155075335 -44554815 - MER5B DNA MER1_type -140 38 1 2014 132 3 0 chr5 155075393 155075682 -44554468 - AluSx SINE Alu -16 296 7 38 93 0 0 chr5 155075784 155075892 -44554258 + AT_rich Low_complexity Low_complexity 1 108 0 21 57 0 0 chr5 155076064 155076099 -44554051 + AT_rich Low_complexity Low_complexity 1 35 0 3240 31 0 0 chr5 155076194 155076576 -44553574 - L1PA3 LINE L1 -1 6154 5773 493 255 42 50 chr5 155076799 155077038 -44553112 + MLT1J LTR MaLR 275 511 0 213 94 0 0 chr5 155077067 155077099 -44553051 + (TC)n Simple_repeat Simple_repeat 1 32 0 4417 151 21 57 chr5 155077157 155078043 -44552107 - L1MB3 LINE L1 -4 6179 5328 1879 167 0 3 chr5 155078043 155078336 -44551814 - AluJb SINE Alu -20 292 1 4417 151 21 57 chr5 155078336 155078403 -44551747 - L1MB3 LINE L1 -855 5328 5260 318 256 139 23 chr5 155078416 155078545 -44551605 - L1ME4a LINE L1 -12 6109 5966 1763 175 32 23 chr5 155078562 155078870 -44551280 - AluJo SINE Alu -1 311 1 211 236 18 0 chr5 155078900 155078955 -44551195 + L2 LINE L2 3257 3312 -1 237 237 166 7 chr5 155079625 155079764 -44550386 - L1ME4a LINE L1 -2322 5486 5326 2073 125 23 3 chr5 155080299 155080604 -44549546 - AluSq SINE Alu -2 311 1 248 374 0 19 chr5 155080913 155081068 -44549082 + GA-rich Low_complexity Low_complexity 2 153 0 235 289 13 0 chr5 155081115 155081191 -44548959 - MIR SINE MIR 0 262 186 228 268 178 25 chr5 155081828 155081985 -44548165 + L1ME4a LINE L1 5410 5590 -531 273 287 0 0 chr5 155082085 155082179 -44547971 + L1ME4a LINE L1 5711 5804 -317 27 0 0 0 chr5 155082833 155082860 -44547290 + AT_rich Low_complexity Low_complexity 1 27 0 373 244 12 24 chr5 155083089 155083171 -44546979 + MIR SINE MIR 65 145 -63 2452 79 7 0 chr5 155083423 155083727 -44546423 + AluSg SINE Alu 1 306 -4 909 182 0 25 chr5 155084499 155084658 -44545492 - FRAM SINE Alu -11 165 11 2391 86 0 10 chr5 155085550 155085853 -44544297 + AluSx SINE Alu 1 300 -12 313 261 59 84 chr5 155085853 155086056 -44544094 + L1ME4a LINE L1 5918 6115 -6 354 254 0 0 chr5 155086608 155086718 -44543432 + (TG)n Simple_repeat Simple_repeat 1 110 0 411 241 165 12 chr5 155087726 155087896 -44542254 - MIR SINE MIR -3 259 64 394 221 79 24 chr5 155087912 155088039 -44542111 - MER94 DNA DNA 0 134 1 1038 215 5 23 chr5 155088042 155088261 -44541889 - MER20 DNA MER1_type 0 219 5 749 177 0 0 chr5 155088386 155088510 -44541640 - FLAM_C SINE Alu -19 124 1 204 40 0 0 chr5 155090110 155090135 -44540015 + (GA)n Simple_repeat Simple_repeat 2 26 0 180 179 0 0 chr5 155091341 155091380 -44538770 + CT-rich Low_complexity Low_complexity 2 40 0 1533 190 51 20 chr5 155091748 155092043 -44538107 - AluJo SINE Alu -8 304 1 284 319 16 87 chr5 155092458 155092643 -44537507 - L2 LINE L2 -92 3180 3009 384 244 186 36 chr5 155092914 155093107 -44537043 + L2 LINE L2 1785 2006 -1308 2622 100 50 60 chr5 155093136 155093617 -44536533 - MER34B LTR ERV1 -29 536 61 1775 148 3 68 chr5 155093636 155093947 -44536203 - AluSx SINE Alu -21 291 1 430 122 14 0 chr5 155093947 155094021 -44536129 - MER34B LTR ERV1 -489 76 2 1912 273 64 89 chr5 155094028 155094702 -44535448 + L2 LINE L2 2031 2679 -635 2280 82 0 16 chr5 155094702 155095008 -44535142 + AluY SINE Alu 1 301 -10 1912 273 64 89 chr5 155095008 155095235 -44534915 + L2 LINE L2 2679 2910 -404 932 179 37 0 chr5 155095247 155095409 -44534741 - FRAM SINE Alu -9 167 1 663 259 39 44 chr5 155095419 155095483 -44534667 + L2 LINE L2 2919 2982 -290 2605 30 3 0 chr5 155095483 155095780 -44534370 - AluY SINE Alu 0 311 14 663 259 39 44 chr5 155095780 155096019 -44534131 + L2 LINE L2 2982 3272 0 200 328 0 0 chr5 155096109 155096173 -44533977 + MIR SINE MIR 187 250 -12 1856 147 0 4 chr5 155097602 155097874 -44532276 + AluSx SINE Alu 1 271 -41 394 247 44 32 chr5 155098341 155098471 -44531679 + MIR SINE MIR 48 177 -62 397 265 108 99 chr5 155098474 155098697 -44531453 - MIR SINE MIR -5 257 33 631 308 34 13 chr5 155099825 155100062 -44530088 + MIR SINE MIR 19 260 -2 26 104 0 0 chr5 155100146 155100242 -44529908 + AT_rich Low_complexity Low_complexity 1 96 0 1522 179 3 46 chr5 155100295 155100487 -44529663 - AluJo SINE Alu -18 294 95 2484 85 0 0 chr5 155100487 155100792 -44529358 + AluSq SINE Alu 1 305 -8 243 0 0 0 chr5 155100792 155100819 -44529331 + (TA)n Simple_repeat Simple_repeat 2 28 0 393 39 0 0 chr5 155100818 155100869 -44529281 + (GA)n Simple_repeat Simple_repeat 2 52 0 1522 179 3 46 chr5 155100819 155100982 -44529168 - AluJo SINE Alu -215 97 1 423 343 48 16 chr5 155101686 155101934 -44528216 + MIR SINE MIR 7 262 0 321 244 104 67 chr5 155102153 155102317 -44527833 + MIR SINE MIR 9 178 -84 220 356 27 69 chr5 155102316 155102347 -44527803 - L2 LINE L2 -2 3270 3239 * 2129 113 10 0 chr5 155102347 155102639 -44527511 + AluSq SINE Alu 1 295 -18 220 356 27 69 chr5 155102639 155102795 -44527355 - L2 LINE L2 -33 3239 3091 882 247 69 12 chr5 155102837 155103084 -44527066 + MIR SINE MIR 1 261 -1 232 272 37 12 chr5 155103283 155103364 -44526786 + L1MC1 LINE L1 5609 5691 -2117 240 35 0 0 chr5 155103507 155103536 -44526614 + (CA)n Simple_repeat Simple_repeat 2 30 0 2157 149 6 0 chr5 155103593 155103935 -44526215 + MER7A DNA MER2_type 2 343 -3 852 144 26 100 chr5 155103944 155104173 -44525977 + L1MC1 LINE L1 6116 6327 -6 552 197 14 82 chr5 155104555 155104702 -44525448 - MER45A DNA AcHobo 0 178 42 225 209 116 0 chr5 155105143 155105186 -44524964 - L2 LINE L2 -33 3280 3233 403 238 127 8 chr5 155105205 155105331 -44524819 - MIR SINE MIR -9 253 113 1881 181 9 3 chr5 155105654 155105996 -44524154 + Tigger7 DNA MER2_type 1 344 -2143 725 174 35 0 chr5 155105991 155106135 -44524015 + Tigger7 DNA MER2_type 2339 2487 0 * 340 344 53 39 chr5 155106212 155106473 -44523677 + L2 LINE L2 2738 3000 -272 2090 134 0 3 chr5 155106491 155106783 -44523367 - AluJb SINE Alu -21 291 1 345 279 106 19 chr5 155107078 155107239 -44522911 + L2 LINE L2 3129 3303 -10 2188 127 45 0 chr5 155107245 155107577 -44522573 - MER7A DNA MER2_type 0 346 2 222 62 0 0 chr5 155107659 155107691 -44522459 + (TC)n Simple_repeat Simple_repeat 1 32 0 405 0 0 0 chr5 155107694 155107739 -44522411 + (TG)n Simple_repeat Simple_repeat 1 45 0 351 0 0 0 chr5 155109147 155109186 -44520964 + (CA)n Simple_repeat Simple_repeat 2 40 0 501 187 11 0 chr5 155109217 155109308 -44520842 + MLT1D LTR MaLR 2 93 -412 286 98 0 0 chr5 155109304 155109345 -44520805 + MLT1C LTR MaLR 427 467 0 * 1040 236 51 15 chr5 155109349 155109683 -44520467 + MLT1C-int LTR MaLR 5 350 -1385 745 115 23 8 chr5 155109683 155109813 -44520337 + MLT1D LTR MaLR 374 505 0 349 265 24 0 chr5 155109979 155110062 -44520088 - L2 LINE L2 0 3272 3188 431 301 110 0 chr5 155110069 155110215 -44519935 + MIR SINE MIR 74 235 -27 799 292 49 12 chr5 155113511 155113754 -44516396 - MIR SINE MIR 0 262 11 741 184 61 122 chr5 155113874 155113961 -44516189 - MER5A DNA MER1_type -5 184 93 2413 109 0 0 chr5 155113961 155114272 -44515878 - AluSx SINE Alu -1 311 1 741 184 61 122 chr5 155114272 155114380 -44515770 - MER5A DNA MER1_type -96 93 1 2544 57 7 0 chr5 155115165 155115465 -44514685 + AluY SINE Alu 1 302 -9 2278 96 0 0 chr5 155115968 155116259 -44513891 + AluY SINE Alu 1 291 -20 515 295 98 34 chr5 155116265 155116499 -44513651 - MIR SINE MIR -11 251 3 509 238 16 24 chr5 155117505 155117631 -44512519 + MIR SINE MIR 28 152 -110 183 279 93 35 chr5 155117769 155117855 -44512295 + L2 LINE L2 2102 2192 -1122 972 163 0 0 chr5 155117858 155118025 -44512125 + AluSg/x SINE Alu 135 301 0 709 228 178 116 chr5 155118034 155118562 -44511588 + L2 LINE L2 2191 2685 -628 2352 86 0 10 chr5 155118562 155118864 -44511286 + AluSq SINE Alu 1 299 -14 709 228 178 116 chr5 155118864 155119337 -44510813 + L2 LINE L2 2685 3279 -34 387 321 177 35 chr5 155119335 155119862 -44510288 - L2 LINE L2 -4 3268 2667 * 180 0 0 0 chr5 155120065 155120085 -44510065 + (A)n Simple_repeat Simple_repeat 1 20 0 1118 286 146 47 chr5 155120126 155120763 -44509387 - L2 LINE L2 -674 2640 1941 1018 176 36 5 chr5 155126571 155126793 -44503357 - L1MA4 LINE L1 -6 6294 6066 2078 126 16 10 chr5 155127346 155127656 -44502494 + AluSx SINE Alu 1 312 0 753 294 74 17 chr5 155129040 155129271 -44500879 - MIR SINE MIR -17 245 2 825 161 167 0 chr5 155130150 155130312 -44499838 + MER5A DNA MER1_type 1 189 0 193 275 98 72 chr5 155131164 155131357 -44498793 + L2 LINE L2 2330 2527 -787 996 179 56 6 chr5 155131385 155131564 -44498586 - MER5A DNA MER1_type -1 188 1 483 258 16 0 chr5 155131582 155131710 -44498440 - MER94 DNA DNA -1 133 4 1031 286 99 13 chr5 155131723 155132341 -44497809 + L2 LINE L2 2619 3303 -10 614 260 61 35 chr5 155133378 155133609 -44496541 + MIR SINE MIR 16 252 -10 1811 87 18 0 chr5 155133741 155133970 -44496180 + AluSg/x SINE Alu 67 299 -13 225 259 12 25 chr5 155134481 155134562 -44495588 + Charlie4 DNA MER1_type 1882 1961 0 2262 104 3 3 chr5 155135723 155136022 -44494128 + AluSg SINE Alu 1 299 -11 700 280 89 36 chr5 155136660 155137320 -44492830 - L1M4 LINE L1 -944 5202 4508 380 360 59 0 chr5 155139523 155139709 -44490441 - MIR SINE MIR -3 259 63 2414 109 0 0 chr5 155141956 155142268 -44487882 - AluSx SINE Alu 0 312 1 180 0 0 0 chr5 155142323 155142343 -44487807 + (T)n Simple_repeat Simple_repeat 1 20 0 190 295 193 30 chr5 155142709 155142875 -44487275 + L2 LINE L2 3073 3265 -7 200 184 0 0 chr5 155143282 155143320 -44486830 + (CGG)n Simple_repeat Simple_repeat 3 40 0 22 0 0 0 chr5 155144302 155144324 -44485826 + AT_rich Low_complexity Low_complexity 1 22 0 192 97 0 0 chr5 155144455 155144486 -44485664 + (GTTTG)n Simple_repeat Simple_repeat 4 34 0 351 311 42 17 chr5 155145457 155145576 -44484574 - L2 LINE L2 -8 3264 3143 316 214 41 82 chr5 155145588 155145686 -44484464 - L2 LINE L2 0 3272 3179 2367 82 0 0 chr5 155146329 155146620 -44483530 - AluY SINE Alu 0 311 21 607 246 72 18 chr5 155148158 155148325 -44481825 - MIR SINE MIR -66 196 21 219 246 88 0 chr5 155148989 155149046 -44481104 - MIR SINE MIR -79 183 122 188 245 149 76 chr5 155149430 155149679 -44480471 - L2 LINE L2 -156 3116 2850 223 237 0 34 chr5 155150542 155150601 -44479549 + C-rich Low_complexity Low_complexity 1 57 0 519 214 75 21 chr5 155150989 155151135 -44479015 - MIR SINE MIR -12 250 98 551 270 0 8 chr5 155151918 155152044 -44478106 + MIR SINE MIR 19 143 -119 2183 86 0 89 chr5 155152101 155152427 -44477723 + AluSp SINE Alu 1 297 -16 576 274 126 27 chr5 155152430 155152653 -44477497 - MIR SINE MIR -1 261 17 205 235 25 126 chr5 155153055 155153174 -44476976 + L2 LINE L2 2988 3094 -219 324 120 0 0 chr5 155153577 155153627 -44476523 + (CAG)n Simple_repeat Simple_repeat 1 50 0 545 352 43 12 chr5 155153641 155153894 -44476256 - MIR SINE MIR 0 262 2 574 253 139 37 chr5 155154068 155154313 -44475837 - L2 LINE L2 -21 3292 3023 2545 54 0 31 chr5 155155138 155155455 -44474695 + AluSx SINE Alu 1 307 -5 1276 76 0 0 chr5 155155457 155155614 -44474536 + AluSg/x SINE Alu 139 295 -17 2604 47 0 0 chr5 155155614 155155911 -44474239 + AluY SINE Alu 1 297 -14 2297 80 3 7 chr5 155156256 155156544 -44473606 + AluSp SINE Alu 15 301 -12 345 289 54 20 chr5 155156561 155156710 -44473440 + MIR SINE MIR 109 262 0 512 317 98 0 chr5 155157163 155157327 -44472823 + MIR SINE MIR 83 262 0 240 298 124 14 chr5 155157563 155157781 -44472369 - L1MC4 LINE L1 -97 7945 7704 477 163 82 0 chr5 155157828 155157926 -44472224 - L1MD2 LINE L1 -11 6348 6243 478 104 0 0 chr5 155157933 155158000 -44472150 - MADE1 DNA Mariner -12 68 2 2167 223 64 50 chr5 155158030 155158304 -44471846 - L1MD2 LINE L1 -193 6166 5897 2095 94 0 0 chr5 155158304 155158570 -44471580 - AluSc SINE Alu 0 309 44 2167 223 64 50 chr5 155158570 155158982 -44471168 - L1MD2 LINE L1 -462 5897 5470 1255 233 140 39 chr5 155158993 155159038 -44471112 + L2 LINE L2 2645 2684 -629 1539 114 19 0 chr5 155159038 155159249 -44470901 - AluSg/x SINE Alu -17 295 81 1255 233 140 39 chr5 155159249 155159299 -44470851 + L2 LINE L2 2684 2728 -585 2107 123 3 63 chr5 155159299 155159631 -44470519 - AluJb SINE Alu 0 312 1 1255 233 140 39 chr5 155159631 155160134 -44470016 + L2 LINE L2 2728 3310 -3 547 305 47 29 chr5 155160299 155160578 -44469572 + LTR16C LTR ERVL 151 434 -57 574 223 85 11 chr5 155160717 155160871 -44469279 + L1ME2 LINE L1 4887 5059 -1087 2383 96 6 10 chr5 155160871 155161183 -44468967 + AluSq SINE Alu 2 312 -1 574 223 85 11 chr5 155161183 155161216 -44468934 + L1ME2 LINE L1 5059 5088 -1058 2883 188 32 16 chr5 155161245 155161706 -44468444 + L1ME2 LINE L1 5175 5654 -510 1923 178 46 48 chr5 155161706 155162161 -44467989 + MSTB2 LTR MaLR 4 457 0 2883 188 32 16 chr5 155162161 155162463 -44467687 + L1ME2 LINE L1 5654 5950 -214 441 314 73 1 chr5 155162475 155162756 -44467394 - L2 LINE L2 -267 3046 2749 262 348 81 43 chr5 155162756 155163078 -44467072 - L2 LINE L2 -111 3161 2828 324 314 8 16 chr5 155163368 155163492 -44466658 - MER5A DNA MER1_type -13 176 54 506 269 12 19 chr5 155163915 155164075 -44466075 - MIR SINE MIR -75 187 29 255 61 0 0 chr5 155164401 155164434 -44465716 + (CAG)n Simple_repeat Simple_repeat 3 35 0 2007 129 36 3 chr5 155165291 155165593 -44464557 - AluSx SINE Alu 0 312 1 599 241 60 6 chr5 155165728 155165894 -44464256 + Charlie8 DNA MER1_type 91 265 -2152 226 356 0 48 chr5 155165925 155166029 -44464121 + MIR SINE MIR 19 117 -91 543 159 15 91 chr5 155166180 155166312 -44463838 + L2 LINE L2 3188 3309 -4 1332 302 87 22 chr5 155166971 155167200 -44462950 + MLT1K LTR MaLR 4 217 -371 2074 124 0 17 chr5 155167200 155167536 -44462614 + AluSx SINE Alu 5 312 0 1332 302 87 22 chr5 155167536 155167849 -44462301 + MLT1K LTR MaLR 217 581 -7 1236 110 11 33 chr5 155167895 155168029 -44462121 + AluJb SINE Alu 1 131 -181 459 0 0 0 chr5 155168029 155168080 -44462070 + (CA)n Simple_repeat Simple_repeat 2 52 0 1236 110 11 33 chr5 155168080 155168127 -44462023 + AluJb SINE Alu 131 178 -134 635 300 33 21 chr5 155168552 155168792 -44461358 - MIR SINE MIR 0 262 20 2230 129 0 0 chr5 155169148 155169458 -44460692 - AluSx SINE Alu -2 310 1 454 298 36 24 chr5 155169830 155169998 -44460152 - MIR SINE MIR -68 194 25 515 73 12 37 chr5 155171711 155171793 -44458357 - MADE1 DNA Mariner 0 80 1 2661 43 0 0 chr5 155174158 155174461 -44455689 + AluY SINE Alu 1 303 -8 704 126 0 0 chr5 155174656 155174767 -44455383 - AluSg/x SINE Alu -3 306 196 808 135 56 0 chr5 155175823 155175949 -44454201 - FLAM_A SINE Alu 0 133 1 1883 158 0 10 chr5 155175975 155176272 -44453878 - AluJb SINE Alu -16 296 3 1783 146 4 14 chr5 155176373 155176648 -44453502 + AluJo SINE Alu 25 296 -16 2167 120 0 3 chr5 155176649 155176949 -44453201 + AluSx SINE Alu 1 299 -13 2460 89 0 6 chr5 155177028 155177342 -44452808 - AluSx SINE Alu 0 312 1 1264 161 9 24 chr5 155178904 155179115 -44451035 - AluJo SINE Alu -53 259 52 597 219 0 0 chr5 155179198 155179312 -44450838 - FLAM_C SINE Alu -19 114 1 631 212 74 26 chr5 155179353 155179542 -44450608 + MER113 DNA MER1_type? 2 199 -322 452 263 119 50 chr5 155181575 155181853 -44448297 - L1MC4a LINE L1 -1905 5903 5607 21 0 0 0 chr5 155183460 155183481 -44446669 + AT_rich Low_complexity Low_complexity 1 21 0 190 254 169 0 chr5 155183517 155183588 -44446562 + L2 LINE L2 3231 3313 0 199 301 58 58 chr5 155184025 155184128 -44446022 + L2 LINE L2 3211 3313 0 2181 109 3 0 chr5 155184224 155184533 -44445617 + AluSx SINE Alu 1 310 0 1796 188 0 10 chr5 155184732 155185046 -44445104 - AluJb SINE Alu -1 311 1 1324 174 41 89 chr5 155185449 155185765 -44444385 - AluJo SINE Alu -11 301 1 2341 62 41 0 chr5 155185888 155186180 -44443970 + AluY SINE Alu 1 304 -7 1477 213 86 54 chr5 155186273 155186498 -44443652 - L1ME3 LINE L1 -13 6149 5933 2462 155 27 7 chr5 155186498 155186912 -44443238 + MSTB LTR MaLR 1 422 -4 1477 213 86 54 chr5 155186912 155187207 -44442943 - L1ME3 LINE L1 -229 5933 5612 573 263 31 78 chr5 155187216 155187509 -44442641 - L1ME3 LINE L1 -1073 5073 4795 575 251 116 53 chr5 155187633 155187936 -44442214 - HAL1 LINE L1 -1555 952 631 197 289 134 0 chr5 155189665 155189762 -44440388 + L2 LINE L2 3160 3269 -3 236 325 16 73 chr5 155189794 155189985 -44440165 - MLT1K LTR MaLR -75 513 334 326 233 71 119 chr5 155190147 155190357 -44439793 - MLT1L LTR MaLR -414 201 2 2147 83 22 7 chr5 155190649 155190952 -44439198 - AluSc SINE Alu 0 307 1 407 260 66 36 chr5 155191494 155191690 -44438460 - L2 LINE L2 -4 3309 3108 430 200 42 33 chr5 155192530 155192650 -44437500 + MER5C DNA MER1_type 1 121 -203 2427 59 35 0 chr5 155192815 155193105 -44437045 - AluY SINE Alu -11 300 1 2329 89 7 0 chr5 155193137 155193430 -44436720 + AluSx SINE Alu 1 295 -17 725 259 85 13 chr5 155193430 155193654 -44436496 - MIR SINE MIR -22 240 1 684 220 116 97 chr5 155194109 155194377 -44435773 + L1ME3 LINE L1 5868 6140 -22 256 232 146 12 chr5 155195529 155195611 -44434539 - MIR SINE MIR -63 199 107 859 265 82 39 chr5 155195611 155196048 -44434102 - MLT1H LTR MaLR 0 549 94 660 121 30 38 chr5 155196063 155196195 -44433955 - L1MB8 LINE L1 0 6178 6048 * 7264 40 11 8 chr5 155196190 155196856 -44433294 - L1PA7 LINE L1 -1 6153 5491 2172 121 7 0 chr5 155196856 155197162 -44432988 - AluSg SINE Alu -2 308 1 7264 40 11 8 chr5 155197162 155197858 -44432292 - L1PA7 LINE L1 -663 5491 4793 2031 125 37 50 chr5 155197862 155197934 -44432216 - L1MB8 LINE L1 -122 6056 5985 2482 77 3 0 chr5 155197934 155198234 -44431916 - AluY SINE Alu -10 301 1 2031 125 37 50 chr5 155198234 155198538 -44431612 - L1MB8 LINE L1 -193 5985 5685 265 311 34 0 chr5 155198618 155198737 -44431413 - MLT1H-int LTR MaLR -1 1370 1248 400 230 72 36 chr5 155199133 155199272 -44430878 + HAL1 LINE L1 811 954 -1553 2382 99 7 0 chr5 155199308 155199610 -44430540 - AluSx SINE Alu -8 304 1 283 175 0 53 chr5 155199820 155199877 -44430273 - MLT1H1 LTR MaLR 0 555 505 295 43 0 43 chr5 155200525 155200572 -44429578 + L1PA15 LINE L1 6118 6162 -3 461 229 68 0 chr5 155200594 155200712 -44429438 - L1MD3 LINE L1 -10 7985 7860 688 225 40 23 chr5 155200717 155200890 -44429260 - MLT1G1 LTR MaLR -384 211 36 369 279 82 14 chr5 155201210 155201357 -44428793 - MER117 DNA MER1_type -39 158 2 305 225 14 0 chr5 155201359 155201430 -44428720 - MIR3 SINE MIR -50 158 87 1698 156 0 24 chr5 155201459 155201747 -44428403 + AluJo SINE Alu 2 282 -30 211 194 0 0 chr5 155202142 155202178 -44427972 + (TG)n Simple_repeat Simple_repeat 1 36 0 491 273 156 28 chr5 155203312 155203783 -44426367 + L2 LINE L2 2726 3246 -67 1651 171 4 21 chr5 155203982 155204304 -44425846 - AluJb SINE Alu 0 327 11 203 316 8 83 chr5 155205070 155205203 -44424947 + L2 LINE L2 2896 3018 -254 5710 83 39 2 chr5 155205309 155206102 -44424048 + L1MA2 LINE L1 5483 6304 0 2554 70 0 0 chr5 155206136 155206435 -44423715 + AluY SINE Alu 1 299 -12 2396 90 3 10 chr5 155206635 155206812 -44423338 - AluSx SINE Alu -2 310 134 2360 96 0 0 chr5 155206812 155207104 -44423046 - AluSg SINE Alu -16 294 3 2396 90 3 10 chr5 155207104 155207238 -44422912 - AluSx SINE Alu -178 134 1 1254 161 19 5 chr5 155207650 155207861 -44422289 - MER20 DNA MER1_type -5 214 1 1817 180 10 3 chr5 155207885 155208190 -44421960 - AluJo SINE Alu -5 307 1 24 32 0 0 chr5 155208468 155208499 -44421651 + AT_rich Low_complexity Low_complexity 1 31 0 858 245 90 13 chr5 155208506 155208739 -44421411 - MIR SINE MIR 0 262 12 2069 129 0 0 chr5 155209043 155209323 -44420827 + AluSx SINE Alu 1 280 -32 440 297 115 11 chr5 155209406 155209588 -44420562 - MIR SINE MIR -47 215 15 5814 113 55 145 chr5 155209588 155209866 -44420284 + Tigger3b DNA MER2_type 1 302 -2726 843 156 0 8 chr5 155209866 155209994 -44420156 - AluJb SINE Alu -59 253 127 5814 113 55 145 chr5 155209994 155210063 -44420087 + Tigger3b DNA MER2_type 302 376 -2652 1882 164 3 7 chr5 155210063 155210361 -44419789 + AluJb SINE Alu 1 297 -15 243 0 0 0 chr5 155210362 155210389 -44419761 + (TA)n Simple_repeat Simple_repeat 1 27 0 201 39 0 0 chr5 155210389 155210415 -44419735 + (GA)n Simple_repeat Simple_repeat 1 26 0 5814 113 55 145 chr5 155210415 155211289 -44418861 + Tigger3b DNA MER2_type 374 1231 0 1889 153 0 3 chr5 155213237 155213531 -44416619 + AluJb SINE Alu 1 293 -19 209 200 171 43 chr5 155215203 155215273 -44414877 - L2 LINE L2 0 3272 3194 459 282 157 18 chr5 155215804 155216004 -44414146 - MIR SINE MIR -20 242 16 844 162 0 22 chr5 155218431 155218567 -44411583 + FRAM SINE Alu 28 160 -16 3291 108 39 8 chr5 155218586 155219097 -44411053 - L1MB3 LINE L1 -10 6173 5647 252 199 57 66 chr5 155220751 155220860 -44409290 - MIR3 SINE MIR -33 175 70 704 172 184 6 chr5 155221283 155221446 -44408704 - LTR47A LTR ERVL 0 452 261 2419 68 3 0 chr5 155221508 155221817 -44408333 - AluSp SINE Alu -3 310 1 1754 175 10 10 chr5 155221891 155222199 -44407951 - AluJo SINE Alu -4 308 1 1725 173 3 3 chr5 155222280 155222580 -44407570 + AluJo SINE Alu 3 302 -10 280 304 82 6 chr5 155223176 155223334 -44406816 + MIR3 SINE MIR 32 201 -7 758 255 19 34 chr5 155223488 155223696 -44406454 - MIR SINE MIR -10 252 48 967 101 0 0 chr5 155223725 155223854 -44406296 + AluSq/x SINE Alu 1 129 -184 522 68 61 8 chr5 155223854 155223986 -44406164 + (TA)n Simple_repeat Simple_repeat 2 140 0 1277 110 0 0 chr5 155223986 155224159 -44405991 + AluSp SINE Alu 125 297 -16 312 320 180 13 chr5 155225306 155225678 -44404472 - L1MC4a LINE L1 -1854 5954 5521 270 205 193 12 chr5 155225678 155225761 -44404389 + MIR SINE MIR 134 231 -31 274 253 71 50 chr5 155225901 155226000 -44404150 - L2 LINE L2 -22 3250 3150 382 256 124 11 chr5 155226282 155226523 -44403627 - L1M3 LINE L1 -637 5534 5263 1728 157 21 7 chr5 155226582 155226869 -44403281 - AluSx SINE Alu -21 291 1 1174 91 0 0 chr5 155227049 155227247 -44402903 - AluSp SINE Alu 0 327 130 2074 116 0 10 chr5 155227250 155227552 -44402598 - AluSx SINE Alu -13 299 1 576 184 95 45 chr5 155227645 155227824 -44402326 - LTR45B LTR ERV1 0 489 302 235 200 29 71 chr5 155227881 155227951 -44402199 - MER72 LTR ERV1 -246 476 410 541 233 67 48 chr5 155228294 155228625 -44401525 - L1M3 LINE L1 -1443 4703 4367 1315 310 177 32 chr5 155228852 155229967 -44400183 - L2 LINE L2 -79 3193 1925 2505 244 96 17 chr5 155230718 155231886 -44398264 - L1MC/D LINE L1 -426 5816 4550 2190 87 10 3 chr5 155232348 155232646 -44397504 - AluSq SINE Alu -13 300 1 2403 73 0 0 chr5 155232782 155233083 -44397067 - AluY SINE Alu -10 301 1 365 344 0 16 chr5 155234038 155234163 -44395987 - MIR SINE MIR -59 149 27 342 354 34 7 chr5 155234773 155234920 -44395230 + MIR3 SINE MIR 21 171 -37 214 352 11 11 chr5 155238727 155238818 -44391332 + MIR SINE MIR 160 250 -12 595 312 12 6 chr5 155239281 155239451 -44390699 + MIR SINE MIR 25 195 -67 23 0 0 0 chr5 155241049 155241072 -44389078 + AT_rich Low_complexity Low_complexity 1 23 0 2261 84 3 10 chr5 155241630 155241941 -44388209 - AluSp SINE Alu -4 309 1 1314 199 63 119 chr5 155242145 155242607 -44387543 + MER63B DNA MER1_type 1 436 0 1229 177 75 71 chr5 155244523 155244817 -44385333 - AluJb SINE Alu -6 296 2 1786 127 33 0 chr5 155245035 155245310 -44384840 + AluSq SINE Alu 1 284 -29 2163 88 3 3 chr5 155245451 155245745 -44384405 - AluSg SINE Alu -16 294 1 540 172 0 0 chr5 155246225 155246312 -44383838 - FLAM_A SINE Alu -10 132 46 569 206 144 7 chr5 155246524 155246670 -44383480 + MLT1C LTR MaLR 1 166 -301 2055 184 70 16 chr5 155246928 155247382 -44382768 - MSTB1 LTR MaLR 0 432 1 727 188 20 13 chr5 155247414 155247563 -44382587 - MLT1A1 LTR MaLR -215 150 1 1182 282 126 9 chr5 155247589 155248040 -44382110 + L2 LINE L2 2805 3308 -5 477 181 7 40 chr5 155248240 155248313 -44381837 + L1MA7 LINE L1 6148 6215 -76 1991 146 0 3 chr5 155248313 155248614 -44381536 - AluSx SINE Alu -12 300 1 477 181 7 40 chr5 155248614 155248689 -44381461 + L1MA7 LINE L1 6215 6291 0 201 74 0 0 chr5 155249367 155249394 -44380756 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 227 203 0 94 chr5 155249432 155249496 -44380654 + MIR SINE MIR 108 165 -97 180 320 23 55 chr5 155250973 155251101 -44379049 + L3 LINE CR1 1013 1136 -441 909 220 5 5 chr5 155251197 155251383 -44378767 + MER5A DNA MER1_type 1 186 -3 903 182 50 68 chr5 155251400 155251620 -44378530 - MER58A DNA MER1_type 0 224 9 2029 275 143 15 chr5 155251729 155252654 -44377496 + L2 LINE L2 464 1506 -1808 395 138 15 0 chr5 155252702 155252767 -44377383 + AluS SINE Alu 30 95 -207 1201 135 5 21 chr5 155252843 155253036 -44377114 + AluJb SINE Alu 108 297 -15 323 340 173 6 chr5 155253044 155253362 -44376788 + L2 LINE L2 1541 1911 -1403 189 226 129 16 chr5 155254018 155254080 -44376070 - MIR SINE MIR 0 262 194 333 269 64 92 chr5 155254569 155254607 -44375543 - MIR SINE MIR -119 143 105 2633 111 23 57 chr5 155254607 155254773 -44375377 - MSTB LTR MaLR -1 425 255 2558 55 0 0 chr5 155254773 155255084 -44375066 + AluY SINE Alu 1 311 0 2633 111 23 57 chr5 155255084 155255357 -44374793 - MSTB LTR MaLR -171 255 1 333 269 64 92 chr5 155255357 155255459 -44374691 - MIR SINE MIR -157 105 7 1591 170 7 27 chr5 155255595 155255895 -44374255 + AluJo SINE Alu 6 299 -13 822 258 63 48 chr5 155256384 155256636 -44373514 + L2 LINE L2 2123 2378 -936 254 345 7 49 chr5 155256995 155257137 -44373013 + L2 LINE L2 2922 3057 -215 538 199 205 0 chr5 155257204 155257360 -44372790 + L2 LINE L2 2439 2626 -688 1881 124 24 0 chr5 155259407 155259698 -44370452 + AluSx SINE Alu 5 302 -10 1765 163 0 3 chr5 155260040 155260346 -44369804 - AluJo SINE Alu -7 305 1 2260 77 3 3 chr5 155260353 155260652 -44369498 - AluSp SINE Alu -14 299 1 344 191 83 12 chr5 155260790 155260874 -44369276 - MIR3 SINE MIR -5 203 114 2318 71 0 3 chr5 155261677 155261971 -44368179 + AluY SINE Alu 1 293 -18 594 254 39 20 chr5 155262744 155262943 -44367207 + L1ME3A LINE L1 5751 5956 -214 306 166 86 26 chr5 155262943 155263028 -44367122 - L1MC4 LINE L1 -1339 6983 1995 383 157 37 0 chr5 155263028 155263048 -44367102 + (TA)n Simple_repeat Simple_repeat 4 112 0 2221 111 0 0 chr5 155263055 155263353 -44366797 - AluSx SINE Alu -14 298 1 2434 75 0 0 chr5 155263397 155263691 -44366459 - AluSg1 SINE Alu -15 294 1 302 299 88 83 chr5 155263728 155263932 -44366218 + L1ME3A LINE L1 5963 6167 -3 1772 92 0 4 chr5 155264076 155264303 -44365847 + AluSg/x SINE Alu 80 305 -5 1937 128 62 0 chr5 155265761 155266050 -44364100 + AluSq SINE Alu 1 307 -6 2356 74 3 7 chr5 155266161 155266458 -44363692 + AluY SINE Alu 2 297 -14 420 20 0 0 chr5 155267049 155267098 -44363052 + (ATG)n Simple_repeat Simple_repeat 2 50 0 310 342 62 36 chr5 155267313 155267506 -44362644 - L2 LINE L2 -160 3112 2915 2132 108 23 23 chr5 155267532 155267839 -44362311 + AluSx SINE Alu 1 307 -5 325 379 29 37 chr5 155267855 155267967 -44362183 - L2 LINE L2 -430 2884 2773 2134 107 0 32 chr5 155267967 155268275 -44361875 + AluSq SINE Alu 1 298 -15 325 379 29 37 chr5 155268275 155268434 -44361716 - L2 LINE L2 -541 2773 2615 314 269 70 52 chr5 155268464 155268604 -44361546 + L1MEd LINE L1 1128 1297 -4862 977 182 11 11 chr5 155268609 155268790 -44361360 + AluJb SINE Alu 129 309 -3 238 261 97 18 chr5 155268793 155268958 -44361192 + L1MEd LINE L1 1313 1490 -4820 2052 116 23 20 chr5 155268960 155269263 -44360887 + AluSx SINE Alu 1 304 -8 2196 103 26 0 chr5 155269319 155269621 -44360529 + AluSg SINE Alu 1 310 0 311 237 69 15 chr5 155269713 155269844 -44360306 + L1MEd LINE L1 2474 2611 -3518 562 169 102 17 chr5 155270538 155270656 -44359494 - FLAM_A SINE Alu -2 131 4 2246 92 23 0 chr5 155270753 155271089 -44359061 + AluSp SINE Alu 1 343 0 34 24 0 0 chr5 155271869 155271910 -44358240 + AT_rich Low_complexity Low_complexity 1 41 0 748 172 0 16 chr5 155272790 155272918 -44357232 + FLAM_A SINE Alu 1 126 -7 1910 166 3 28 chr5 155272934 155273254 -44356896 + AluJb SINE Alu 1 312 0 2492 55 0 3 chr5 155274273 155274566 -44355584 - AluY SINE Alu -19 292 1 975 44 0 0 chr5 155276286 155276400 -44353750 + AluY SINE Alu 187 300 -11 26 30 0 0 chr5 155276504 155276537 -44353613 + AT_rich Low_complexity Low_complexity 1 33 0 714 231 0 0 chr5 155276891 155277021 -44353129 + FLAM_A SINE Alu 1 130 -3 28 0 0 0 chr5 155277064 155277092 -44353058 + AT_rich Low_complexity Low_complexity 1 28 0 2310 109 3 6 chr5 155277162 155277475 -44352675 + AluSx SINE Alu 1 312 0 180 0 0 0 chr5 155277631 155277651 -44352499 + (G)n Simple_repeat Simple_repeat 1 20 0 686 206 7 0 chr5 155277665 155277806 -44352344 + AluSp SINE Alu 153 294 -19 222 296 141 0 chr5 155277821 155277963 -44352187 - L2 LINE L2 -653 2661 2500 1777 145 11 14 chr5 155278562 155278845 -44351305 - AluSx SINE Alu -30 282 1 1781 225 21 35 chr5 155279045 155279561 -44350589 + L1MC3 LINE L1 6345 6853 -932 1106 151 47 25 chr5 155279581 155280635 -44349515 + L1MC2 LINE L1 5196 6326 -18 1999 122 3 3 chr5 155280639 155280927 -44349223 + AluSx SINE Alu 1 288 -24 1553 186 4 8 chr5 155280941 155281204 -44348946 + AluJb SINE Alu 2 263 -49 446 151 21 0 chr5 155281209 155281302 -44348848 + L1MD3 LINE L1 6904 6998 -997 205 282 110 62 chr5 155281517 155281826 -44348324 + L2 LINE L2 2164 2487 -827 346 295 148 17 chr5 155282011 155282248 -44347902 + MLT1L LTR MaLR 3 270 -345 361 361 88 56 chr5 155284375 155284772 -44345378 - L2 LINE L2 0 3272 2839 306 264 121 23 chr5 155284772 155284946 -44345204 - MER117 DNA MER1_type -3 194 4 361 361 88 56 chr5 155284946 155285211 -44344939 - L2 LINE L2 -433 2839 2584 2159 127 13 0 chr5 155286835 155287135 -44343015 - AluSq SINE Alu -9 304 1 2214 93 21 0 chr5 155287407 155287696 -44342454 + AluSc SINE Alu 1 295 -14 184 361 21 21 chr5 155287707 155287804 -44342346 + MIR3 SINE MIR 84 180 -28 2072 117 3 3 chr5 155287818 155288108 -44342042 + AluSg SINE Alu 2 291 -19 1780 155 39 0 chr5 155288129 155288413 -44341737 - AluSx SINE Alu -17 295 1 325 313 16 67 chr5 155289113 155289306 -44340844 - MIR SINE MIR -52 156 15 2369 139 30 5 chr5 155293936 155294369 -44335781 + L1MA4 LINE L1 5389 5832 -468 1432 167 102 0 chr5 155294406 155294729 -44335421 + L1MA4 LINE L1 5945 6300 0 752 237 139 80 chr5 155294984 155295321 -44334829 - L2 LINE L2 -2 3311 2955 722 205 194 41 chr5 155295559 155295666 -44334484 + MER46C DNA MER2_type 1 90 -248 2103 118 24 3 chr5 155295666 155295955 -44334195 + AluSx SINE Alu 1 295 -17 722 205 194 41 chr5 155295955 155296140 -44334010 + MER46C DNA MER2_type 90 338 0 660 252 106 14 chr5 155296224 155296442 -44333708 - MIR SINE MIR -16 246 9 6509 83 40 11 chr5 155296836 155297844 -44332306 + L1MA5A LINE L1 5261 6297 0 1547 184 3 55 chr5 155298050 155298176 -44331974 + AluJo SINE Alu 1 132 -180 2406 73 7 0 chr5 155298176 155298478 -44331672 - AluY SINE Alu -6 305 2 1547 184 3 55 chr5 155298478 155298661 -44331489 + AluJo SINE Alu 132 294 -18 2309 102 0 3 chr5 155298685 155298988 -44331162 - AluSc SINE Alu -7 302 1 2293 113 0 0 chr5 155298990 155299012 -44331138 - AluSp SINE Alu -3 310 289 459 0 0 0 chr5 155299012 155299063 -44331087 + (TATG)n Simple_repeat Simple_repeat 2 52 0 2293 113 0 0 chr5 155299063 155299350 -44330800 - AluSp SINE Alu -23 290 1 974 262 20 25 chr5 155300251 155300495 -44329655 + MIR SINE MIR 9 251 -11 309 350 33 0 chr5 155300745 155300865 -44329285 + L2 LINE L2 3149 3272 0 2421 81 0 7 chr5 155300965 155301272 -44328878 - AluSq SINE Alu -8 305 1 411 118 0 0 chr5 155301345 155301413 -44328737 - AluSx SINE Alu -2 307 240 472 31 0 31 chr5 155301572 155301636 -44328514 + L1PA5 LINE L1 6087 6148 -6 1929 139 24 3 chr5 155301775 155302070 -44328080 - AluSx SINE Alu -11 301 1 696 268 74 41 chr5 155302404 155302673 -44327477 - L1ME3A LINE L1 -306 5864 5587 234 250 114 0 chr5 155302702 155302790 -44327360 - L1ME3A LINE L1 -627 5537 5440 297 128 0 0 chr5 155303250 155303297 -44326853 + L1MB8 LINE L1 5942 5988 -190 1777 144 4 0 chr5 155303297 155303553 -44326597 - AluSx SINE Alu -53 259 3 405 228 228 0 chr5 155304580 155304707 -44325443 + MLT1F1 LTR MaLR 5 160 -382 2372 68 3 3 chr5 155304857 155305151 -44324999 + AluSq SINE Alu 1 294 -19 1704 159 42 14 chr5 155305215 155305573 -44324577 + L1MB8 LINE L1 5811 6178 0 672 261 17 17 chr5 155305573 155305749 -44324401 + MLT1F1 LTR MaLR 169 344 -223 571 314 75 36 chr5 155305936 155306439 -44323711 + HAL1 LINE L1 153 675 -1832 1808 254 50 27 chr5 155306500 155307265 -44322885 + L2 LINE L2 2533 3313 0 495 253 43 9 chr5 155307282 155307515 -44322635 - L1M4 LINE L1 -2244 3902 3662 683 145 111 0 chr5 155307633 155307750 -44322400 + FLAM_C SINE Alu 1 130 -3 650 246 143 36 chr5 155308451 155308675 -44321475 + MIR SINE MIR 15 262 0 184 306 47 24 chr5 155308774 155308793 -44321357 - MIR SINE MIR -94 168 151 2324 90 3 10 chr5 155308793 155309103 -44321047 - AluSc SINE Alu -1 308 1 184 306 47 24 chr5 155309103 155309168 -44320982 - MIR SINE MIR -111 151 82 2230 100 7 0 chr5 155309172 155309462 -44320688 - AluSq SINE Alu -17 296 5 2035 128 3 32 chr5 155309765 155310078 -44320072 + AluSq SINE Alu 1 304 -9 445 308 16 16 chr5 155310461 155310643 -44319507 - MLT1K LTR MaLR -8 580 399 817 146 0 31 chr5 155310678 155310808 -44319342 - FLAM_C SINE Alu -7 126 1 556 317 42 39 chr5 155311117 155311429 -44318721 - L1ME4a LINE L1 -158 5963 5651 2289 94 13 0 chr5 155311761 155312059 -44318091 - AluSx SINE Alu -10 302 1 953 189 62 88 chr5 155313357 155313413 -44316737 + MER96B DNA MER1_type? 73 129 -288 1929 151 0 25 chr5 155313413 155313732 -44316418 + AluJo SINE Alu 1 311 -1 953 189 62 88 chr5 155313732 155314029 -44316121 + MER96B DNA MER1_type? 129 417 0 1205 210 36 10 chr5 155315176 155315432 -44314718 + MIR SINE MIR 1 262 0 2144 134 0 0 chr5 155316008 155316300 -44313850 - AluSx SINE Alu -16 296 5 1352 152 57 0 chr5 155316421 155316632 -44313518 + MER58A DNA MER1_type 1 223 -1 2559 211 58 30 chr5 155316661 155317149 -44313001 - MLT1F1 LTR MaLR 0 567 61 1872 142 0 76 chr5 155317149 155317332 -44312818 - AluJb SINE Alu -7 305 156 2384 69 3 7 chr5 155317332 155317623 -44312527 - AluY SINE Alu -21 290 1 1872 142 0 76 chr5 155317623 155317769 -44312381 - AluJb SINE Alu -156 156 1 2559 211 58 30 chr5 155317769 155317815 -44312335 - MLT1F1 LTR MaLR -506 61 18 448 273 19 32 chr5 155317835 155317989 -44312161 + MIR SINE MIR 74 225 -37 604 114 0 0 chr5 155318042 155318121 -44312029 - LTR69 LTR ERVL -509 79 1 307 301 0 0 chr5 155318124 155318207 -44311943 + L2 LINE L2 3190 3272 0 943 138 27 185 chr5 155318413 155318429 -44311721 - MER58A DNA MER1_type -2199 221 204 1885 167 0 3 chr5 155318429 155318729 -44311421 - AluJb SINE Alu -12 300 2 943 138 27 185 chr5 155318729 155318972 -44311178 - MER58A DNA MER1_type -2216 204 3 31 0 0 0 chr5 155319170 155319201 -44310949 + AT_rich Low_complexity Low_complexity 1 31 0 357 261 92 56 chr5 155319206 155319327 -44310823 - L1MC/D LINE L1 -2005 5803 5671 236 54 54 0 chr5 155319327 155319364 -44310786 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 357 261 92 56 chr5 155319364 155319437 -44310713 - L1MC/D LINE L1 -2137 5671 5602 394 165 311 19 chr5 155319437 155319540 -44310610 + FLAM_A SINE Alu 1 133 0 1859 125 81 0 chr5 155320081 155320353 -44309797 - AluSg SINE Alu -16 294 1 322 290 77 52 chr5 155320472 155320627 -44309523 - MIR SINE MIR -96 166 8 221 167 24 0 chr5 155320940 155320982 -44309168 + GA-rich Low_complexity Low_complexity 3 45 0 24 53 0 0 chr5 155321210 155321248 -44308902 + AT_rich Low_complexity Low_complexity 1 38 0 659 189 16 39 chr5 155321509 155321636 -44308514 + FLAM_A SINE Alu 1 124 -9 1912 159 26 0 chr5 155321764 155322066 -44308084 + AluSx SINE Alu 1 310 -2 1721 205 24 4 chr5 155322424 155322897 -44307253 + L1ME LINE L1 5121 5604 -562 2353 93 3 0 chr5 155323010 155323321 -44306829 - AluSx SINE Alu 0 312 1 1569 89 5 0 chr5 155323355 155323558 -44306592 - AluSp SINE Alu -17 296 93 355 320 53 60 chr5 155323558 155323971 -44306179 + L1M4 LINE L1 2423 2832 -3314 264 296 20 31 chr5 155323987 155324085 -44306065 - L2 LINE L2 -850 2464 2368 210 260 0 0 chr5 155324559 155324609 -44305541 - MIR SINE MIR -3 259 210 1275 186 0 4 chr5 155324609 155324835 -44305315 - AluJb SINE Alu -4 308 84 418 191 9 57 chr5 155324835 155324940 -44305210 + L1ME LINE L1 5540 5639 -482 5420 132 40 2 chr5 155324970 155325810 -44304340 + L1MC1 LINE L1 5449 6320 -13 339 248 70 16 chr5 155325874 155326003 -44304147 + L1ME LINE L1 5668 5803 -318 518 312 44 15 chr5 155326004 155326209 -44303941 + L2 LINE L2 2481 2691 -623 26 30 0 0 chr5 155326407 155326440 -44303710 + AT_rich Low_complexity Low_complexity 1 33 0 908 249 74 19 chr5 155326480 155326789 -44303361 - L1ME3 LINE L1 -302 5860 5535 1840 168 7 10 chr5 155326789 155327099 -44303051 - AluJb SINE Alu -3 309 1 682 238 98 5 chr5 155327099 155327292 -44302858 - MIR SINE MIR -51 211 1 286 377 0 0 chr5 155327303 155327449 -44302701 + L1ME LINE L1 5724 5869 -252 3549 242 91 68 chr5 155327523 155327636 -44302514 - L1MC4 LINE L1 -3 8039 7930 264 30 0 0 chr5 155327636 155327669 -44302481 + (CA)n Simple_repeat Simple_repeat 2 34 0 3549 242 91 68 chr5 155327669 155327709 -44302441 - L1MC4 LINE L1 -112 7930 7892 1111 175 46 150 chr5 155327709 155328035 -44302115 - AluJb SINE Alu -9 293 2 3549 242 91 68 chr5 155328035 155328731 -44301419 - L1MC4 LINE L1 -150 7892 7214 905 159 180 34 chr5 155328731 155328970 -44301180 + ORSL DNA AcHobo 2 275 0 3549 242 91 68 chr5 155328970 155330263 -44299887 - L1MC4 LINE L1 -828 7214 5705 293 134 0 0 chr5 155330290 155330336 -44299814 - Alu SINE Alu -263 40 1 684 174 31 89 chr5 155330343 155330446 -44299704 + L1MC/D LINE L1 5272 5357 -2451 2456 60 7 7 chr5 155330446 155330746 -44299404 + AluY SINE Alu 1 300 -11 684 174 31 89 chr5 155330746 155330866 -44299284 + L1MC/D LINE L1 5357 5482 -2326 625 251 12 78 chr5 155330864 155331107 -44299043 - L1MC4 LINE L1 -2101 5707 5481 * 1540 148 56 133 chr5 155331144 155331521 -44298629 + MER7A DNA MER2_type 1 346 0 1528 133 155 0 chr5 155331521 155331794 -44298356 - MLT1A1 LTR MaLR -44 321 6 1365 91 116 5 chr5 155331813 155332012 -44298138 - AluSc SINE Alu -7 302 82 704 194 14 60 chr5 155332014 155332230 -44297920 - L1MC4 LINE L1 -2330 5478 5273 1939 151 3 31 chr5 155332243 155332585 -44297565 + AluJo SINE Alu 1 333 0 461 276 64 34 chr5 155332600 155332897 -44297253 - L1MC4 LINE L1 -891 5255 4950 1621 149 42 0 chr5 155333011 155333273 -44296877 - AluJb SINE Alu -39 273 1 22 0 0 0 chr5 155333890 155333912 -44296238 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 155334895 155334917 -44295233 + AT_rich Low_complexity Low_complexity 1 22 0 2295 108 0 3 chr5 155335731 155336037 -44294113 - AluSg1 SINE Alu -4 305 1 1553 90 0 10 chr5 155336601 155336833 -44293317 - AluSg/x SINE Alu 0 314 85 207 239 22 0 chr5 155336865 155336911 -44293239 - L2 LINE L2 0 3313 3267 248 160 0 132 chr5 155336944 155337050 -44293100 + L2 LINE L2 3118 3209 -104 2462 63 0 10 chr5 155337071 155337373 -44292777 - AluY SINE Alu -12 299 1 2980 281 106 52 chr5 155337388 155338355 -44291795 - L2 LINE L2 -39 3274 2361 2309 83 43 0 chr5 155338355 155338655 -44291495 + AluSp SINE Alu 1 313 0 2980 281 106 52 chr5 155338655 155339464 -44290686 - L2 LINE L2 -952 2361 1394 2705 119 11 47 chr5 155339584 155340053 -44290097 - Tigger2 DNA MER2_type 0 2718 2267 432 132 0 15 chr5 155340036 155340104 -44290046 - Tigger2 DNA MER2_type -2649 69 3 * 552 202 192 120 chr5 155340106 155340398 -44289752 - MLT1G1 LTR MaLR -31 524 212 1010 199 5 38 chr5 155341423 155341634 -44288516 + MER3 DNA MER1_type 2 205 -4 635 214 0 64 chr5 155341827 155342000 -44288150 + L2 LINE L2 3152 3313 0 198 0 0 0 chr5 155342056 155342078 -44288072 + (TG)n Simple_repeat Simple_repeat 1 22 0 264 77 0 0 chr5 155342078 155342117 -44288033 + (GA)n Simple_repeat Simple_repeat 2 40 0 1122 209 47 16 chr5 155342226 155342479 -44287671 - MIR SINE MIR 0 262 2 847 282 117 45 chr5 155342990 155343476 -44286674 + LTR33 LTR ERVL 1 521 0 1724 252 79 163 chr5 155344069 155344673 -44285477 + L2 LINE L2 1457 2110 -1203 1118 145 122 46 chr5 155344673 155344935 -44285215 + MER33 DNA MER1_type 43 324 0 1724 252 79 163 chr5 155344935 155345854 -44284296 + L2 LINE L2 2110 3054 -259 1983 121 10 20 chr5 155345854 155346151 -44283999 - AluSx SINE Alu -18 294 1 1724 252 79 163 chr5 155346151 155346386 -44283764 + L2 LINE L2 3054 3307 -6 381 22 0 0 chr5 155346700 155346746 -44283404 + (TG)n Simple_repeat Simple_repeat 2 47 0 206 308 26 51 chr5 155346832 155346910 -44283240 + L2 LINE L2 3197 3272 0 807 240 28 37 chr5 155347828 155348045 -44282105 - MIR SINE MIR -31 231 17 356 202 22 22 chr5 155348048 155348137 -44282013 - MIR SINE MIR -26 236 148 248 257 198 10 chr5 155348249 155348350 -44281800 + MIR SINE MIR 22 141 -121 2199 99 0 0 chr5 155348397 155348703 -44281447 + AluSg SINE Alu 1 306 0 505 291 76 12 chr5 155348770 155348942 -44281208 + MIR3 SINE MIR 19 201 -7 263 174 0 72 chr5 155349535 155349604 -44280546 + MIR SINE MIR 78 141 -121 1749 115 104 0 chr5 155349710 155349988 -44280162 + AluSx SINE Alu 1 307 -5 835 164 0 8 chr5 155350461 155350595 -44279555 - FLAM_C SINE Alu 0 133 1 273 121 52 35 chr5 155351131 155351189 -44278961 - L1MC4a LINE L1 -1886 5922 5864 1499 112 69 118 chr5 155351245 155351549 -44278601 + AluJo SINE Alu 4 292 -20 2209 113 13 0 chr5 155351555 155351855 -44278295 + AluSx SINE Alu 3 306 -6 2366 84 0 3 chr5 155351857 155352154 -44277996 + AluSp SINE Alu 1 296 -17 1933 115 40 20 chr5 155352221 155352517 -44277633 - AluSx SINE Alu -10 302 1 303 202 36 24 chr5 155352630 155352714 -44277436 - MIR SINE MIR 0 262 178 * 645 249 63 90 chr5 155352696 155353030 -44277120 + L2 LINE L2 2980 3304 -9 473 274 76 13 chr5 155353048 155353205 -44276945 - MIR SINE MIR -86 176 10 235 241 129 26 chr5 155353240 155353356 -44276794 + MIR3 SINE MIR 78 205 -3 648 287 103 81 chr5 155353458 155354381 -44275769 - L2 LINE L2 -2 3270 2302 279 0 0 0 chr5 155354581 155354612 -44275538 + (TG)n Simple_repeat Simple_repeat 2 32 0 212 0 36 0 chr5 155354675 155354703 -44275447 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 195 42 0 0 chr5 155355454 155355478 -44274672 + (CGCTG)n Simple_repeat Simple_repeat 3 26 0 624 135 0 0 chr5 155355706 155355817 -44274333 + (CAG)n Simple_repeat Simple_repeat 3 113 0 246 238 50 40 chr5 155360594 155360695 -44269455 - L1MC4a LINE L1 -1633 6175 6074 2388 80 0 0 chr5 155360794 155361094 -44269056 - AluSg SINE Alu -10 300 1 189 0 0 0 chr5 155364986 155365007 -44265143 + (CGG)n Simple_repeat Simple_repeat 3 23 0 209 266 26 18 chr5 155365260 155365373 -44264777 + (CCCG)n Simple_repeat Simple_repeat 1 114 0 312 91 0 0 chr5 155370907 155370951 -44259199 + (TGG)n Simple_repeat Simple_repeat 2 45 0 298 183 11 54 chr5 155371025 155371118 -44259032 + (CGGG)n Simple_repeat Simple_repeat 2 90 0 182 125 31 31 chr5 155371264 155371328 -44258822 + (CGG)n Simple_repeat Simple_repeat 3 66 0 363 105 0 0 chr5 155371428 155371485 -44258665 + (CGG)n Simple_repeat Simple_repeat 1 57 0 203 158 0 0 chr5 155372216 155372254 -44257896 + (CAG)n Simple_repeat Simple_repeat 2 39 0 285 109 0 0 chr5 155372327 155372373 -44257777 + (CA)n Simple_repeat Simple_repeat 1 46 0 211 229 0 0 chr5 155372386 155372434 -44257716 + A-rich Low_complexity Low_complexity 1 48 0 21 0 0 0 chr5 155373295 155373316 -44256834 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 155373848 155373870 -44256280 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr5 155373977 155373998 -44256152 + (A)n Simple_repeat Simple_repeat 1 21 0 892 152 0 0 chr5 155377247 155377372 -44252778 - AluJb SINE Alu -187 125 1 1423 227 22 60 chr5 155377463 155377960 -44252190 - L1M4 LINE L1 -1669 4477 4000 502 268 91 53 chr5 155377994 155378052 -44252098 + MIR SINE MIR 9 63 -199 2114 116 7 13 chr5 155378052 155378354 -44251796 + AluY SINE Alu 1 300 -11 502 268 91 53 chr5 155378354 155378504 -44251646 + MIR SINE MIR 63 225 -37 313 273 0 0 chr5 155379173 155379261 -44250889 + MIR SINE MIR 86 173 -89 221 258 15 0 chr5 155379311 155379377 -44250773 + (TGAA)n Simple_repeat Simple_repeat 2 68 0 349 194 0 0 chr5 155379967 155380029 -44250121 - Alu SINE Alu 0 302 241 2585 40 0 3 chr5 155381979 155382277 -44247873 - AluY SINE Alu -14 297 1 206 242 88 22 chr5 155382711 155382802 -44247348 - MIR SINE MIR -79 129 33 28 0 0 0 chr5 155383666 155383694 -44246456 + AT_rich Low_complexity Low_complexity 1 28 0 274 260 120 0 chr5 155383752 155383852 -44246298 - MIR SINE MIR -42 220 109 21 0 0 0 chr5 155385243 155385264 -44244886 + AT_rich Low_complexity Low_complexity 1 21 0 710 216 0 0 chr5 155387053 155387187 -44242963 - AluSg/x SINE Alu 0 312 179 436 335 5 11 chr5 155387206 155387397 -44242753 + MIR SINE MIR 56 245 -17 180 314 0 14 chr5 155387478 155387548 -44242602 + MIR SINE MIR 59 127 -135 421 167 0 42 chr5 155387666 155387774 -44242376 + AluSp/q SINE Alu 215 319 0 593 224 75 123 chr5 155387774 155387960 -44242190 + L1ME3 LINE L1 5535 5697 -467 2515 72 3 0 chr5 155387960 155388267 -44241883 + AluY SINE Alu 1 308 -3 593 224 75 123 chr5 155388267 155388447 -44241703 + L1ME3 LINE L1 5697 5884 -280 27 29 0 0 chr5 155388464 155388498 -44241652 + AT_rich Low_complexity Low_complexity 1 34 0 440 322 44 15 chr5 155388696 155388901 -44241249 - L2 LINE L2 -623 2691 2481 334 259 53 15 chr5 155388902 155389033 -44241117 - L1ME LINE L1 -318 5803 5668 5518 123 25 1 chr5 155389089 155389945 -44240205 - L1MC1 LINE L1 -9 6324 5449 2493 70 0 3 chr5 155389978 155390279 -44239871 + AluY SINE Alu 1 300 -11 423 198 52 52 chr5 155390287 155390403 -44239747 - L1ME LINE L1 -482 5639 5524 2019 105 43 33 chr5 155390659 155390964 -44239186 - AluSx SINE Alu -4 308 1 1116 150 14 33 chr5 155391199 155391412 -44238738 - MER3 DNA MER1_type 0 209 1 251 200 17 17 chr5 155392102 155392162 -44237988 + MIR SINE MIR 55 114 -94 2157 112 0 0 chr5 155392697 155392975 -44237175 - AluSx SINE Alu -13 299 22 1090 75 0 0 chr5 155393548 155393682 -44236468 - AluSg/x SINE Alu 0 312 179 726 260 5 10 chr5 155393700 155393892 -44236258 + MIR SINE MIR 55 245 -17 248 292 0 19 chr5 155393927 155394043 -44236107 + MIR SINE MIR 16 128 -80 909 275 127 34 chr5 155394057 155394555 -44235595 - MLT1F1 LTR MaLR -6 561 18 304 196 62 161 chr5 155394564 155394855 -44235295 - MLT1F1-int LTR MaLR -4 1731 1470 1199 170 76 47 chr5 155394930 155395207 -44234943 - L1MC4a LINE L1 -5 7803 7519 1670 91 189 7 chr5 155395480 155395765 -44234385 - MER44D DNA MER2_type -1 608 2 1828 158 13 23 chr5 155395982 155396285 -44233865 + AluJo SINE Alu 1 300 -12 970 211 0 0 chr5 155396636 155396811 -44233339 - FAM SINE Alu 0 175 1 345 333 56 43 chr5 155396906 155397301 -44232849 + L2 LINE L2 2685 3084 -188 288 315 11 0 chr5 155397733 155397825 -44232325 + L2 LINE L2 3216 3308 -5 206 242 88 22 chr5 155398186 155398277 -44231873 + MIR SINE MIR 33 129 -79 429 131 0 0 chr5 155398850 155398942 -44231208 - AluSx SINE Alu 0 314 223 1087 118 0 7 chr5 155398943 155399095 -44231055 - AluSx SINE Alu -155 157 7 1224 279 120 20 chr5 155399100 155399900 -44230250 - L1M4 LINE L1 -1130 5016 4137 281 203 45 75 chr5 155400336 155400469 -44229681 - L1MC5 LINE L1 -430 7531 7403 831 293 124 30 chr5 155400581 155401139 -44229011 + L2 LINE L2 2688 3308 -5 977 140 25 0 chr5 155401898 155402055 -44228095 + L1MB2 LINE L1 5999 6159 -12 1737 196 0 6 chr5 155403136 155403447 -44226703 + AluJo SINE Alu 1 309 -3 746 264 5 48 chr5 155403580 155403847 -44226303 - L1ME4a LINE L1 -207 5914 5693 1871 149 0 29 chr5 155404256 155404571 -44225579 + AluJb SINE Alu 1 306 -6 374 265 25 48 chr5 155405523 155405662 -44224488 + MIR SINE MIR 17 147 -61 439 313 68 48 chr5 155406499 155406748 -44223402 + LTR16C LTR ERVL 238 491 0 409 224 109 48 chr5 155407321 155407468 -44222682 + L1ME4a LINE L1 5965 6120 -1 227 299 155 40 chr5 155408191 155408469 -44221681 + L2 LINE L2 2608 2917 -397 322 231 0 0 chr5 155408915 155408980 -44221170 - L2 LINE L2 -4 3309 3245 1711 184 0 3 chr5 155408983 155409271 -44220879 + AluJo SINE Alu 1 287 -25 26 0 0 0 chr5 155409275 155409301 -44220849 + AT_rich Low_complexity Low_complexity 1 26 0 1090 456 7 0 chr5 155409304 155409602 -44220548 + AluJb SINE Alu 1 300 -2 1569 288 75 16 chr5 155409606 155410431 -44219719 - L2 LINE L2 -55 3258 2386 2241 175 93 37 chr5 155410659 155411116 -44219034 + MLT1D LTR MaLR 1 551 -16 700 251 37 5 chr5 155411204 155411395 -44218755 + L2 LINE L2 2430 2626 -688 571 217 0 0 chr5 155411409 155411524 -44218626 + L1MD3 LINE L1 7845 7959 -36 2752 218 91 19 chr5 155411652 155412369 -44217781 + L1MC4a LINE L1 7035 7802 -6 1190 209 56 3 chr5 155413730 155414032 -44216118 + L1ME4a LINE L1 5518 5835 -286 316 275 54 20 chr5 155414105 155414254 -44215896 + L1ME4a LINE L1 5965 6118 -3 1155 193 24 0 chr5 155414401 155414614 -44215536 + MER20 DNA MER1_type 2 219 0 349 302 115 0 chr5 155415228 155415367 -44214783 - MIR3 SINE MIR -11 197 43 385 161 0 0 chr5 155415766 155415828 -44214322 - L2 LINE L2 -3 3310 3249 760 245 97 30 chr5 155416188 155416425 -44213725 + MIR SINE MIR 4 256 -6 1605 110 25 0 chr5 155416829 155417074 -44213076 - L1MC1 LINE L1 -604 5729 5479 3497 115 23 62 chr5 155417074 155417417 -44212733 + L1MC1 LINE L1 5709 6019 -314 2117 132 7 13 chr5 155417417 155417720 -44212430 + AluSx SINE Alu 1 301 -11 3497 115 23 62 chr5 155417720 155418024 -44212126 + L1MC1 LINE L1 6019 6333 0 382 340 108 38 chr5 155418210 155418607 -44211543 + L2 LINE L2 2431 2855 -459 1704 234 83 31 chr5 155418736 155419272 -44210878 + MLT1F1 LTR MaLR 1 565 -2 520 344 56 53 chr5 155419322 155419799 -44210351 + L2 LINE L2 2726 3199 -73 * 3291 223 81 42 chr5 155419786 155420699 -44209451 + L2 LINE L2 643 1591 -1723 330 164 0 30 chr5 155420811 155420878 -44209272 - AluS SINE Alu -238 65 1 2241 103 0 23 chr5 155421298 155421435 -44208715 + AluSx SINE Alu 1 140 -177 2244 95 3 0 chr5 155421435 155421743 -44208407 + AluSp SINE Alu 1 309 0 2241 103 0 23 chr5 155421743 155421928 -44208222 + AluSx SINE Alu 140 317 0 370 231 77 41 chr5 155422128 155422265 -44207885 + MIR3 SINE MIR 56 199 -9 222 349 64 23 chr5 155423531 155423703 -44206447 + MIR3 SINE MIR 3 181 -27 396 0 0 0 chr5 155423755 155423799 -44206351 + (CA)n Simple_repeat Simple_repeat 1 44 0 245 184 0 0 chr5 155423820 155423858 -44206292 + L3b LINE CR1 1278 1315 -268 189 329 59 24 chr5 155425174 155425259 -44204891 - MIR SINE MIR -63 145 58 655 320 62 69 chr5 155425649 155426099 -44204051 + L2 LINE L2 2826 3272 0 512 194 105 16 chr5 155426216 155426340 -44203810 - MIR SINE MIR 0 262 128 189 282 51 13 chr5 155427228 155427306 -44202844 + MIR3 SINE MIR 105 185 -23 282 193 0 0 chr5 155428299 155428356 -44201794 + (CA)n Simple_repeat Simple_repeat 1 57 0 856 266 16 0 chr5 155428919 155429111 -44201039 - MIR SINE MIR -12 250 56 257 333 101 22 chr5 155429315 155429453 -44200697 - L2 LINE L2 -802 2512 2364 841 230 38 25 chr5 155429481 155429716 -44200434 - MIR SINE MIR -5 257 20 286 349 18 24 chr5 155429957 155430126 -44200024 - L2 LINE L2 -213 3059 2892 488 250 56 77 chr5 155430969 155431165 -44198985 + MIR SINE MIR 21 212 -50 1728 116 8 8 chr5 155432231 155432473 -44197677 + AluSq SINE Alu 1 242 -71 272 294 92 33 chr5 155432515 155432668 -44197482 - MIR SINE MIR -52 210 49 653 111 10 0 chr5 155432693 155432792 -44197358 - HY3 scRNA scRNA -1 100 1 1133 288 201 33 chr5 155434297 155435811 -44194339 + L2 LINE L2 1487 3272 0 432 239 68 68 chr5 155435937 155436100 -44194050 - MIR3 SINE MIR -43 165 3 284 322 153 0 chr5 155436743 155436861 -44193289 - L2 LINE L2 -1 3271 3136 223 333 0 0 chr5 155436874 155436934 -44193216 - L2 LINE L2 0 3313 3254 3590 248 98 16 chr5 155436936 155437746 -44192404 - L2 LINE L2 0 3313 2571 1989 168 0 0 chr5 155437746 155438049 -44192101 + AluSx SINE Alu 1 303 -9 3590 248 98 16 chr5 155438049 155438630 -44191520 - L2 LINE L2 -742 2571 1812 327 70 0 0 chr5 155438828 155438871 -44191279 + U6 snRNA snRNA 2 44 -63 765 291 27 24 chr5 155438928 155439261 -44190889 - L1ME4a LINE L1 -205 5916 5583 231 283 9 66 chr5 155439597 155439703 -44190447 + MIR SINE MIR 92 191 -71 240 35 0 0 chr5 155443318 155443347 -44186803 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 1624 230 98 43 chr5 155443401 155443914 -44186236 - MLT1F LTR MaLR 0 542 2 204 358 8 42 chr5 155443981 155444101 -44186049 - MIR SINE MIR -74 134 19 3871 24 11 4 chr5 155444102 155444568 -44185582 - L1PA4 LINE L1 -1 6154 5686 6998 31 0 34 chr5 155444630 155445870 -44184280 - L1P2 LINE L1 -434 5721 4524 797 149 94 6 chr5 155446079 155446260 -44183890 - L1MC2 LINE L1 -11 6333 6137 578 278 78 15 chr5 155446294 155446499 -44183651 - MIR SINE MIR -37 225 8 271 284 37 0 chr5 155446648 155446729 -44183421 + MIR3 SINE MIR 110 193 -15 719 267 99 13 chr5 155447169 155447401 -44182749 + MIR SINE MIR 3 254 -8 25 0 0 0 chr5 155448747 155448772 -44181378 + AT_rich Low_complexity Low_complexity 1 25 0 272 274 151 16 chr5 155449320 155449506 -44180644 - L1ME4a LINE L1 -39 6082 5872 623 184 7 71 chr5 155449510 155449651 -44180499 + MLT1A1 LTR MaLR 181 312 -53 418 148 0 0 chr5 155449685 155449746 -44180404 + AluJ/FLAM SINE Alu 1 61 -251 2154 129 7 0 chr5 155449847 155450150 -44180000 + AluSx SINE Alu 1 305 -7 567 238 48 0 chr5 155450153 155450279 -44179871 + MIR SINE MIR 34 165 -97 246 305 10 77 chr5 155452310 155452428 -44177722 - MIR SINE MIR -66 142 45 564 261 236 0 chr5 155453167 155453366 -44176784 - MIR SINE MIR -4 258 13 243 133 0 0 chr5 155453953 155453998 -44176152 + (CA)n Simple_repeat Simple_repeat 1 45 0 696 272 40 5 chr5 155455519 155455743 -44174407 + L2 LINE L2 3082 3313 0 365 334 57 83 chr5 155455880 155456350 -44173800 - L2 LINE L2 0 3272 2815 2086 97 47 4 chr5 155457297 155457575 -44172575 + AluSc SINE Alu 1 290 -19 432 0 0 0 chr5 155457580 155457628 -44172522 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 736 331 40 7 chr5 155458897 155459169 -44170981 + L3 LINE CR1 1230 1510 -67 202 306 167 0 chr5 155459232 155459340 -44170810 - L2 LINE L2 -5 3308 3183 233 186 0 0 chr5 155459573 155459616 -44170534 - MIR SINE MIR -26 236 194 353 347 69 36 chr5 155459637 155459911 -44170239 + L3b LINE CR1 1221 1503 -80 1408 283 108 81 chr5 155461197 155462058 -44168092 + L1ME LINE L1 4300 5195 -951 2332 97 3 0 chr5 155462058 155462347 -44167803 + AluSx SINE Alu 3 292 -20 1408 283 108 81 chr5 155462347 155462504 -44167646 + L1ME LINE L1 5195 5346 -800 393 238 133 6 chr5 155462524 155462720 -44167430 + L1ME LINE L1 5385 5618 -503 411 74 0 0 chr5 155562731 155562785 -44067365 + AluSp/q SINE Alu 240 293 -20 4051 52 0 0 chr5 155562796 155563311 -44066839 + L1P LINE L1 7 521 -5625 5905 17 0 0 chr5 155563311 155563970 -44066180 + L1PA3 LINE L1 5494 6152 -3 35 0 0 0 chr5 155564028 155564063 -44066087 + AT_rich Low_complexity Low_complexity 1 35 0 258 313 72 0 chr5 155565140 155565223 -44064927 + MIR SINE MIR 59 147 -61 21 0 0 0 chr5 155565862 155565883 -44064267 + AT_rich Low_complexity Low_complexity 1 21 0 1314 154 27 18 chr5 155565884 155566104 -44064046 + AluJb SINE Alu 85 306 -6 360 0 0 0 chr5 155566837 155566877 -44063273 + (TG)n Simple_repeat Simple_repeat 2 41 0 473 215 250 7 chr5 155566880 155567024 -44063126 + MLT2C1 LTR ERVL 20 198 -199 2468 156 24 4 chr5 155567882 155568337 -44061813 - L1MB7 LINE L1 -5 6179 5716 2385 113 7 0 chr5 155568354 155568663 -44061487 - AluSx SINE Alu -1 311 1 740 220 0 0 chr5 155568678 155568810 -44061340 - FLAM_C SINE Alu 0 133 2 613 209 2 2 chr5 155568814 155568952 -44061198 - L1MB7 LINE L1 -454 5729 5592 489 123 85 66 chr5 155568965 155569071 -44061079 - L1MB5 LINE L1 -8 6664 6557 * 2531 149 17 11 chr5 155569066 155569599 -44060551 - L1MB5 LINE L1 -445 6233 5699 924 186 60 6 chr5 155569599 155569782 -44060368 - AluSq SINE Alu 0 313 121 5832 213 23 90 chr5 155569782 155570279 -44059871 - L1MB5 LINE L1 -957 5687 5159 186 43 0 0 chr5 155570279 155570302 -44059848 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1731 171 10 27 chr5 155570304 155570596 -44059554 - AluJb SINE Alu -25 287 1 5832 213 23 90 chr5 155570596 155570662 -44059488 - L1MB5 LINE L1 -1486 5158 5089 2405 92 3 0 chr5 155570662 155570966 -44059184 - AluSg SINE Alu -5 305 1 5832 213 23 90 chr5 155570966 155571335 -44058815 - L1MB5 LINE L1 -1555 5089 4697 2385 88 3 0 chr5 155571335 155571629 -44058521 + AluSx SINE Alu 1 295 -17 5832 213 23 90 chr5 155571629 155571677 -44058473 - L1MB5 LINE L1 -1947 4697 4647 1643 177 67 3 chr5 155571677 155571960 -44058190 + AluJb SINE Alu 1 301 -11 2443 68 0 7 chr5 155571969 155572263 -44057887 - AluSg1 SINE Alu -17 292 1 5832 213 23 90 chr5 155572263 155573109 -44057041 - L1MB5 LINE L1 -2005 4639 4000 2201 110 10 10 chr5 155573109 155573410 -44056740 - AluSg SINE Alu -9 301 1 5832 213 23 90 chr5 155573410 155573673 -44056477 - L1MB5 LINE L1 -2644 4000 3721 2033 149 7 0 chr5 155573702 155574004 -44056146 + AluSc SINE Alu 1 304 -5 3258 214 53 52 chr5 155575063 155575699 -44054451 - L1MB5 LINE L1 -2929 3715 3082 867 179 0 8 chr5 155575699 155575833 -44054317 + FLAM_A SINE Alu 1 133 0 3258 214 53 52 chr5 155575833 155576141 -44054009 - L1MB5 LINE L1 -3562 3082 2759 1739 195 10 3 chr5 155576141 155576444 -44053706 + AluJb SINE Alu 1 305 -7 3258 214 53 52 chr5 155576444 155576663 -44053487 - L1MB5 LINE L1 -3885 2759 2542 1110 178 0 0 chr5 155576901 155577075 -44053075 + AluJb SINE Alu 133 306 -6 227 200 0 0 chr5 155577082 155577127 -44053023 - L1MB5 LINE L1 -4180 2466 2422 2046 82 52 4 chr5 155577136 155577439 -44052711 - AluSc SINE Alu 0 316 1 729 186 16 16 chr5 155577465 155577624 -44052526 + FLAM_A SINE Alu 2 133 0 1285 220 218 6 chr5 155577628 155578106 -44052044 - L1MB5 LINE L1 -4228 2418 1840 428 215 0 21 chr5 155578109 155578202 -44051948 + MER2 DNA MER2_type 4 94 -251 1389 212 40 0 chr5 155578203 155578481 -44051669 + AluJo SINE Alu 1 289 -23 1045 111 0 0 chr5 155578494 155578629 -44051521 + AluSq/x SINE Alu 1 135 -178 2214 121 0 3 chr5 155578629 155578934 -44051216 + AluSx SINE Alu 1 304 -8 1467 126 39 8 chr5 155578965 155579219 -44050931 + MER2 DNA MER2_type 83 344 -1 516 202 0 0 chr5 155579229 155579333 -44050817 - L1MB5 LINE L1 -4831 1815 1712 363 255 66 0 chr5 155579344 155579450 -44050700 - L1MB5 LINE L1 -5613 929 817 241 221 11 11 chr5 155579473 155579568 -44050582 + GA-rich Low_complexity Low_complexity 2 96 0 1482 296 99 29 chr5 155579572 155580339 -44049811 - L1MB5 LINE L1 -5721 821 1 563 122 56 0 chr5 155580340 155580447 -44049703 - L1M4 LINE L1 -813 5333 5221 2167 131 0 0 chr5 155580481 155580771 -44049379 - AluSx SINE Alu -18 294 5 23 33 0 0 chr5 155580792 155580822 -44049328 + AT_rich Low_complexity Low_complexity 1 30 0 216 284 60 0 chr5 155581313 155581380 -44048770 - MIR SINE MIR -41 221 151 2372 117 0 0 chr5 155581487 155581795 -44048355 + AluSx SINE Alu 1 308 -4 356 226 201 6 chr5 155581852 155582011 -44048139 + L1MC5 LINE L1 7742 7931 -30 457 265 79 70 chr5 155582196 155582411 -44047739 + MIR SINE MIR 46 262 0 626 311 158 35 chr5 155582897 155583386 -44046764 - L2 LINE L2 0 3272 2725 2432 85 0 0 chr5 155583438 155583732 -44046418 + AluSp SINE Alu 1 294 -19 2286 114 0 3 chr5 155583742 155584048 -44046102 + AluSx SINE Alu 1 305 -7 433 285 217 19 chr5 155584309 155584516 -44045634 - MIR SINE MIR -13 249 2 396 300 101 63 chr5 155585381 155585618 -44044532 - L2 LINE L2 -42 3230 2985 283 324 68 14 chr5 155585685 155585833 -44044317 - L2 LINE L2 -293 2979 2824 541 294 102 5 chr5 155585902 155586089 -44044061 + MIR SINE MIR 58 262 0 590 267 91 5 chr5 155586660 155586847 -44043303 - MIR SINE MIR -32 230 28 378 289 0 53 chr5 155586860 155586974 -44043176 - MER5A DNA MER1_type -1 188 81 373 304 106 19 chr5 155590210 155590443 -44039707 + L2 LINE L2 2797 3051 -221 192 328 75 0 chr5 155590991 155591058 -44039092 + L2 LINE L2 3149 3220 -52 2279 103 0 13 chr5 155593277 155593578 -44036572 - AluSc SINE Alu -12 297 1 510 275 143 8 chr5 155596352 155596596 -44033554 + MER102b DNA MER1_type 56 332 -9 545 322 181 18 chr5 155596627 155597235 -44032915 - L2 LINE L2 -3 3269 2560 648 252 144 22 chr5 155597335 155597557 -44032593 + MIR SINE MIR 14 262 0 601 262 52 91 chr5 155598407 155598693 -44031457 - L2 LINE L2 -5 3267 2993 304 323 70 13 chr5 155599611 155599769 -44030381 + L2 LINE L2 2177 2343 -971 395 284 15 37 chr5 155599773 155599907 -44030243 - L2 LINE L2 -1 3312 3182 270 318 100 23 chr5 155600002 155600203 -44029947 - L2 LINE L2 -321 2992 2720 1561 269 296 24 chr5 155600308 155600337 -44029813 - L2 LINE L2 -575 2739 2719 816 182 115 5 chr5 155600337 155600529 -44029621 - MER20 DNA MER1_type -3 216 4 1561 269 296 24 chr5 155600529 155601006 -44029144 - L2 LINE L2 -595 2719 2373 2015 117 48 0 chr5 155601006 155601297 -44028853 + AluSx SINE Alu 1 305 -7 1561 269 296 24 chr5 155601297 155601363 -44028787 - L2 LINE L2 -941 2373 2326 2143 92 46 0 chr5 155601363 155601644 -44028506 + AluSg SINE Alu 1 294 -16 1561 269 296 24 chr5 155601644 155602470 -44027680 - L2 LINE L2 -988 2326 958 329 221 42 53 chr5 155602474 155602569 -44027581 - L2 LINE L2 -2532 782 689 1003 290 157 13 chr5 155602570 155603166 -44026984 + L2 LINE L2 2344 3023 -249 465 241 68 62 chr5 155603184 155603217 -44026933 - MIR SINE MIR -27 235 204 798 146 23 0 chr5 155603217 155603347 -44026803 - FLAM_C SINE Alu 0 133 1 465 241 68 62 chr5 155603347 155603475 -44026675 - MIR SINE MIR -58 204 73 364 250 196 0 chr5 155603485 155603669 -44026481 + L2 LINE L2 3020 3239 -74 1067 206 0 16 chr5 155603670 155603854 -44026296 - AluJo SINE Alu -131 181 1 2518 99 0 0 chr5 155603857 155604170 -44025980 - AluSp SINE Alu 0 313 1 259 259 12 59 chr5 155604175 155604260 -44025890 + L2 LINE L2 3233 3313 0 220 303 61 20 chr5 155604987 155605086 -44025064 + MIR3 SINE MIR 100 202 -6 * 231 349 30 8 chr5 155605077 155605209 -44024941 - L2 LINE L2 -1824 1490 1356 287 247 52 52 chr5 155609210 155609307 -44020843 - MIR SINE MIR -164 98 2 1828 132 0 4 chr5 155609332 155609598 -44020552 + AluSx SINE Alu 1 265 -47 1798 170 32 0 chr5 155610132 155610415 -44019735 - AluJb SINE Alu -20 292 1 237 208 0 0 chr5 155610418 155610466 -44019684 - MER5A DNA MER1_type -6 183 136 1764 176 17 10 chr5 155610507 155610802 -44019348 - AluJo SINE Alu -15 297 1 2173 107 42 0 chr5 155610811 155611100 -44019050 - AluSp SINE Alu -12 301 1 2097 138 0 3 chr5 155611102 155611400 -44018750 - AluSx SINE Alu -15 297 1 682 183 35 9 chr5 155612029 155612144 -44018006 + FLAM_C SINE Alu 1 118 -15 2286 123 0 0 chr5 155612553 155612861 -44017289 + AluSx SINE Alu 1 308 -4 263 206 68 41 chr5 155612862 155612935 -44017215 - MER5B DNA MER1_type -16 162 88 1716 181 6 29 chr5 155663296 155663611 -43966539 + AluJb SINE Alu 1 308 -4 31 0 0 0 chr5 155663862 155663893 -43966257 + AT_rich Low_complexity Low_complexity 1 31 0 913 292 128 32 chr5 155663927 155664384 -43965766 + HAL1b LINE L1 247 777 -571 216 97 0 0 chr5 155664384 155664415 -43965735 + (TA)n Simple_repeat Simple_repeat 1 31 0 913 292 128 32 chr5 155664415 155664559 -43965591 + HAL1b LINE L1 777 906 -442 1658 157 17 31 chr5 155664707 155665001 -43965149 - AluJb SINE Alu -21 291 2 229 167 0 45 chr5 155665071 155665137 -43965013 + GA-rich Low_complexity Low_complexity 3 65 0 448 251 79 76 chr5 155665151 155665499 -43964651 + L1MC4a LINE L1 5494 5779 -342 23 54 0 0 chr5 155665582 155665619 -43964531 + AT_rich Low_complexity Low_complexity 1 37 0 345 94 0 0 chr5 155665939 155665992 -43964158 - Alu SINE Alu 0 301 249 1014 164 0 0 chr5 155665995 155666160 -43963990 + AluSg/x SINE Alu 148 312 0 795 189 7 0 chr5 155666626 155666769 -43963381 - FAM SINE Alu -22 163 20 21 57 0 0 chr5 155666885 155666920 -43963230 + AT_rich Low_complexity Low_complexity 1 35 0 339 288 163 35 chr5 155666923 155667180 -43962970 + L1ME4a LINE L1 5661 5950 -171 2012 94 49 7 chr5 155667271 155667558 -43962592 - AluSq SINE Alu -14 299 1 22 0 0 0 chr5 155667696 155667718 -43962432 + AT_rich Low_complexity Low_complexity 1 22 0 2075 116 7 7 chr5 155667882 155668183 -43961967 - AluSq SINE Alu -12 301 1 239 195 37 73 chr5 155669006 155669088 -43961062 + L1MA4 LINE L1 6146 6224 -76 730 100 0 0 chr5 155669049 155669159 -43960991 + L1MA5 LINE L1 6185 6294 -6 328 249 60 104 chr5 155669749 155669950 -43960200 + L1MC4a LINE L1 6279 6470 -1338 1567 141 21 0 chr5 155669995 155670229 -43959921 - AluSx SINE Alu -13 299 61 327 150 12 88 chr5 155670271 155670351 -43959799 + AluJ/FLAM SINE Alu 2 75 -227 1503 188 53 71 chr5 155670451 155671109 -43959041 + L1MC5 LINE L1 7090 7735 -226 27 81 0 0 chr5 155671114 155671176 -43958974 + AT_rich Low_complexity Low_complexity 1 62 0 229 229 57 86 chr5 155671190 155671330 -43958820 + L1MC5 LINE L1 7772 7907 -54 433 338 45 5 chr5 155671584 155671785 -43958365 + MIR SINE MIR 48 256 -6 1933 185 0 0 chr5 155672037 155672340 -43957810 + AluJb SINE Alu 1 303 -9 26 82 0 0 chr5 155672448 155672509 -43957641 + AT_rich Low_complexity Low_complexity 1 61 0 22 0 0 0 chr5 155673060 155673082 -43957068 + AT_rich Low_complexity Low_complexity 1 22 0 2115 96 63 46 chr5 155673082 155673477 -43956673 - L1MA7 LINE L1 0 6291 5890 690 47 0 0 chr5 155673828 155673914 -43956236 + (TA)n Simple_repeat Simple_repeat 2 87 0 7389 35 12 1 chr5 155674998 155676476 -43953674 - L1PA5 LINE L1 -5 6149 4664 29982 65 5 13 chr5 155676576 155680706 -43949444 - L1PA5 LINE L1 -1732 4414 319 690 57 0 0 chr5 155680709 155680797 -43949353 - L1PA5 LINE L1 -6048 98 11 1661 177 20 10 chr5 155680951 155681256 -43948894 + AluJb SINE Alu 1 308 -4 2210 109 3 0 chr5 155681576 155681888 -43948262 - AluSx SINE Alu 0 313 1 207 0 0 0 chr5 155681972 155681995 -43948155 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 1125 205 0 5 chr5 155682005 155682210 -43947940 + AluJo SINE Alu 87 290 -22 225 121 0 0 chr5 155682301 155682334 -43947816 + Alu SINE Alu 173 205 -97 924 111 16 0 chr5 155682334 155682460 -43947690 + AluSg/x SINE Alu 168 295 -15 225 270 16 0 chr5 155682471 155682534 -43947616 + MLT1H LTR MaLR 479 542 -7 649 99 0 0 chr5 155683082 155683173 -43946977 - AluSg/x SINE Alu -16 293 203 678 245 161 86 chr5 155683284 155683725 -43946425 + MLT1J LTR MaLR 34 507 -4 1829 168 0 16 chr5 155683779 155684082 -43946068 + AluJo SINE Alu 1 298 -14 2105 123 23 13 chr5 155684084 155684394 -43945756 + AluSq SINE Alu 1 313 0 310 195 80 0 chr5 155684396 155684509 -43945641 + L1ME4a LINE L1 5831 5952 -169 764 224 133 12 chr5 155684620 155684875 -43945275 + L1MB7 LINE L1 5894 6179 -5 235 304 20 59 chr5 155685044 155685146 -43945004 + MER5A DNA MER1_type 73 170 -19 283 309 110 0 chr5 155685211 155685347 -43944803 - L2 LINE L2 -1865 1449 1299 1466 78 54 5 chr5 155685833 155686037 -43944113 - AluY SINE Alu -7 304 91 1934 134 15 20 chr5 155686138 155686480 -43943670 + L1M3 LINE L1 5430 5769 -414 2311 102 0 13 chr5 155686480 155686793 -43943357 + AluSx SINE Alu 1 309 -3 924 200 43 44 chr5 155686938 155687469 -43942681 - L1MA9 LINE L1 -42 6270 5777 1357 161 5 0 chr5 155687639 155687844 -43942306 - AluSx SINE Alu -106 206 1 584 48 36 0 chr5 155687846 155687929 -43942221 - MER30 DNA MER1_type -144 86 1 652 189 146 16 chr5 155688083 155688236 -43941914 - MER5A DNA MER1_type -7 182 4 32 57 0 0 chr5 155689227 155689280 -43940870 + AT_rich Low_complexity Low_complexity 1 53 0 2264 108 0 10 chr5 155689506 155689812 -43940338 - AluSx SINE Alu -9 303 1 431 303 69 18 chr5 155689819 155690096 -43940054 + L1MC4a LINE L1 5592 5882 -1926 2072 122 3 3 chr5 155690471 155690767 -43939383 - AluSx SINE Alu -14 298 3 734 164 22 8 chr5 155691398 155691532 -43938618 + AluJb SINE Alu 1 136 -176 2059 111 14 17 chr5 155691554 155691851 -43938299 + AluSq SINE Alu 1 296 -17 261 0 0 0 chr5 155691926 155691955 -43938195 + (CAA)n Simple_repeat Simple_repeat 2 30 0 350 208 85 38 chr5 155692086 155692192 -43937958 + L2 LINE L2 3203 3313 0 21 71 0 0 chr5 155692243 155692285 -43937865 + AT_rich Low_complexity Low_complexity 1 42 0 274 154 0 19 chr5 155692285 155692337 -43937813 + L1ME4a LINE L1 5555 5605 -516 245 240 0 0 chr5 155692466 155692516 -43937634 + L1ME4a LINE L1 5781 5830 -291 377 224 168 8 chr5 155692550 155692675 -43937475 + L1ME4a LINE L1 5812 5956 -165 268 145 53 30 chr5 155692701 155692832 -43937318 + (TA)n Simple_repeat Simple_repeat 2 135 0 480 270 7 29 chr5 155692875 155693012 -43937138 - MIR SINE MIR -123 139 6 41 58 0 0 chr5 155693419 155693488 -43936662 + AT_rich Low_complexity Low_complexity 1 69 0 1789 158 21 0 chr5 155693875 155694160 -43935990 + AluSx SINE Alu 1 291 -21 1551 199 21 10 chr5 155694236 155694527 -43935623 + AluJo SINE Alu 1 294 -18 3025 163 49 8 chr5 155694546 155695154 -43934996 + L1MB7 LINE L1 5533 6165 -19 336 340 37 37 chr5 155695515 155695730 -43934420 + MIR SINE MIR 2 216 -46 1814 157 6 45 chr5 155696274 155696587 -43933563 + AluJo SINE Alu 1 301 -11 2445 83 0 0 chr5 155697848 155698149 -43932001 + AluSg SINE Alu 1 301 -9 2214 121 0 10 chr5 155698154 155698468 -43931682 + AluSx SINE Alu 1 311 -1 9871 30 3 174 chr5 155698558 155700239 -43929911 + SVA Other Other 1 1401 0 2014 137 3 3 chr5 155700310 155700602 -43929548 + AluSx SINE Alu 1 292 -20 1543 185 17 3 chr5 155701181 155701468 -43928682 + AluJb SINE Alu 1 291 -21 217 386 103 22 chr5 155702070 155702254 -43927896 + L2 LINE L2 2716 2914 -400 295 351 108 16 chr5 155702452 155702637 -43927513 - L2 LINE L2 -397 2917 2716 631 152 19 0 chr5 155702731 155702836 -43927314 - MSTD LTR MaLR -287 109 3 420 245 50 29 chr5 155702941 155703080 -43927070 - L2 LINE L2 -296 3017 2876 756 192 34 53 chr5 155703400 155703608 -43926542 + AluJo SINE Alu 1 204 -108 1244 86 0 6 chr5 155703720 155703883 -43926267 + AluSq SINE Alu 124 285 -28 2374 93 6 0 chr5 155704420 155704731 -43925419 + AluSq SINE Alu 1 313 0 2204 165 46 19 chr5 155705209 155705731 -43924419 + L1MB7 LINE L1 4670 5205 -941 1605 165 23 0 chr5 155705731 155705997 -43924153 + AluJb SINE Alu 1 272 -40 731 32 0 11 chr5 155706008 155706103 -43924047 + (GGGGA)n Simple_repeat Simple_repeat 1 94 0 917 111 6 23 chr5 155706119 155706290 -43923860 + (GAAA)n Simple_repeat Simple_repeat 1 168 0 1008 213 0 41 chr5 155706294 155706491 -43923659 + AluJo SINE Alu 50 238 -74 1331 193 11 4 chr5 155706596 155706870 -43923280 + L1MB7 LINE L1 5838 6113 -71 1711 170 23 26 chr5 155706870 155707176 -43922974 + AluJb SINE Alu 1 305 -7 2294 88 0 16 chr5 155707176 155707484 -43922666 + AluSx SINE Alu 1 303 -9 359 114 0 43 chr5 155707487 155707557 -43922593 + L1MC4 LINE L1 7976 8042 0 1582 163 18 21 chr5 155707564 155707846 -43922304 + AluJb SINE Alu 1 281 -31 236 209 11 33 chr5 155707846 155707937 -43922213 + (TTAA)n Simple_repeat Simple_repeat 4 92 0 588 121 0 0 chr5 155708371 155708454 -43921696 - AluSg SINE Alu -224 86 4 844 206 40 16 chr5 155708454 155708706 -43921444 + L1M4 LINE L1 5057 5314 -832 1873 134 3 25 chr5 155708706 155708990 -43921160 - AluJb SINE Alu -15 297 20 1862 118 49 79 chr5 155709090 155709495 -43920655 + L1MB3 LINE L1 5784 6176 -7 282 70 0 18 chr5 155709510 155709567 -43920583 + L1MB3 LINE L1 6127 6182 -1 1475 140 3 157 chr5 155710334 155710462 -43919688 + AluJb SINE Alu 1 147 -165 1968 101 40 4 chr5 155710462 155710740 -43919410 + AluSg SINE Alu 1 288 -22 1475 140 3 157 chr5 155710740 155710968 -43919182 + AluJb SINE Alu 147 302 -10 2274 96 0 37 chr5 155710968 155711292 -43918858 + AluSx SINE Alu 1 312 0 274 296 42 0 chr5 155711430 155711501 -43918649 + MIR SINE MIR 35 108 -154 503 252 61 102 chr5 155711794 155712040 -43918110 + MIR SINE MIR 19 254 -8 1700 93 0 13 chr5 155713042 155713279 -43916871 + AluY SINE Alu 66 299 -12 1001 156 120 0 chr5 155713720 155713912 -43916238 + MER20 DNA MER1_type 1 215 -4 635 158 0 169 chr5 155713934 155714117 -43916033 + FRAM SINE Alu 1 150 -26 29 0 0 0 chr5 155714127 155714156 -43915994 + AT_rich Low_complexity Low_complexity 1 29 0 2238 112 0 7 chr5 155714630 155714934 -43915216 - AluSx SINE Alu -10 302 1 282 95 0 0 chr5 155714964 155715006 -43915144 + (CA)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr5 155715109 155715130 -43915020 + AT_rich Low_complexity Low_complexity 1 21 0 1404 202 65 17 chr5 155715138 155715430 -43914720 + AluJo SINE Alu 1 306 -6 31 0 0 0 chr5 155715470 155715501 -43914649 + AT_rich Low_complexity Low_complexity 1 31 0 2236 101 3 3 chr5 155715517 155715814 -43914336 - AluSg SINE Alu -13 297 1 1795 110 95 4 chr5 155715994 155716267 -43913883 + AluSx SINE Alu 1 298 -14 2118 104 10 3 chr5 155716572 155716869 -43913281 - AluSx SINE Alu -11 301 3 2102 153 0 0 chr5 155716896 155717204 -43912946 + AluSx SINE Alu 1 308 -4 471 63 0 0 chr5 155717808 155717871 -43912279 + (CA)n Simple_repeat Simple_repeat 2 64 0 802 177 8 0 chr5 155717970 155718100 -43912050 + FLAM_A SINE Alu 1 131 -2 2034 114 33 7 chr5 155718104 155718403 -43911747 + AluSq SINE Alu 1 307 -6 1890 63 13 8 chr5 155719070 155719308 -43910842 + AluSc SINE Alu 58 296 -13 2553 59 16 0 chr5 155719453 155719760 -43910390 + AluSq SINE Alu 1 312 -1 213 121 0 0 chr5 155720554 155720587 -43909563 + (CCG)n Simple_repeat Simple_repeat 1 33 0 213 296 141 0 chr5 155722001 155722072 -43908078 + MIR SINE MIR 14 94 -168 28 0 0 0 chr5 155722215 155722243 -43907907 + AT_rich Low_complexity Low_complexity 1 28 0 2459 71 0 0 chr5 155722368 155722664 -43907486 + AluSc SINE Alu 1 296 -13 24 67 0 0 chr5 155722755 155722800 -43907350 + AT_rich Low_complexity Low_complexity 1 45 0 2404 109 0 3 chr5 155723600 155723913 -43906237 + AluSq SINE Alu 1 312 -1 1096 104 0 0 chr5 155724029 155724164 -43905986 + AluSq/x SINE Alu 1 135 -178 2345 100 0 0 chr5 155724165 155724456 -43905694 + AluSg SINE Alu 1 291 -19 611 132 149 0 chr5 155724464 155724585 -43905565 + U4 snRNA snRNA 1 139 -6 2346 64 0 7 chr5 155724692 155724974 -43905176 + AluY SINE Alu 1 280 -31 262 24 0 0 chr5 155725074 155725115 -43905035 + AluY SINE Alu 259 299 -1 1671 176 6 22 chr5 155725139 155725452 -43904698 - AluJb SINE Alu -4 308 1 478 290 66 27 chr5 155725670 155725853 -43904297 - MIR SINE MIR -71 191 2 1440 85 0 0 chr5 155726092 155726269 -43903881 + AluSg/x SINE Alu 126 302 -10 1119 68 0 0 chr5 155726355 155726487 -43903663 + AluY SINE Alu 1 132 -179 771 147 7 70 chr5 155726612 155726755 -43903395 + AluJo SINE Alu 2 135 -177 1948 147 0 23 chr5 155727012 155727318 -43902832 + AluJo SINE Alu 3 301 -11 812 184 45 0 chr5 155727439 155727607 -43902543 + L1MC/D LINE L1 5435 5613 -2172 1998 110 3 86 chr5 155727607 155727722 -43902428 + AluSx SINE Alu 1 124 -188 432 0 0 0 chr5 155727722 155727770 -43902380 + (CTA)n Simple_repeat Simple_repeat 1 48 0 1998 110 3 86 chr5 155727770 155727991 -43902159 + AluSx SINE Alu 124 309 -3 864 153 47 27 chr5 155728166 155728316 -43901834 - AluJb SINE Alu -17 295 143 222 105 0 0 chr5 155728322 155728360 -43901790 + (TTTTG)n Simple_repeat Simple_repeat 1 38 0 863 144 0 8 chr5 155728481 155728606 -43901544 - FLAM_C SINE Alu -19 124 1 2156 128 0 0 chr5 155728842 155729131 -43901019 + AluSg SINE Alu 7 295 -15 2420 85 3 0 chr5 155729654 155729949 -43900201 - AluSq SINE Alu -17 296 1 2125 125 17 0 chr5 155730971 155731260 -43898890 - AluSx SINE Alu -18 294 1 222 37 0 0 chr5 155731261 155731288 -43898862 + (T)n Simple_repeat Simple_repeat 1 27 0 1793 151 10 27 chr5 155731423 155731560 -43898590 + AluSx SINE Alu 1 139 -173 2196 112 10 3 chr5 155731560 155731856 -43898294 + AluSx SINE Alu 1 298 -14 1793 151 10 27 chr5 155731856 155732017 -43898133 + AluSx SINE Alu 139 294 -18 233 291 51 0 chr5 155732024 155732103 -43898047 + L1MC/D LINE L1 5744 5826 -1982 2242 112 3 3 chr5 155732103 155732406 -43897744 + AluSc SINE Alu 1 303 -6 2036 126 39 0 chr5 155732818 155732984 -43897166 - AluSx SINE Alu -14 298 115 459 0 0 0 chr5 155732984 155733035 -43897115 + (TG)n Simple_repeat Simple_repeat 2 52 0 2036 126 39 0 chr5 155733035 155733153 -43896997 - AluSx SINE Alu -197 115 3 1085 144 0 0 chr5 155733176 155733322 -43896828 - AluSg/x SINE Alu -31 279 134 180 0 0 0 chr5 155733322 155733342 -43896808 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 2104 114 4 0 chr5 155733342 155733622 -43896528 - AluSx SINE Alu -31 281 1 676 204 61 7 chr5 155733631 155733778 -43896372 + Charlie1a DNA MER1_type 4 158 -1297 1126 149 0 0 chr5 155733802 155733963 -43896187 + FRAM SINE Alu 1 161 -15 3013 186 59 12 chr5 155733967 155734645 -43895505 + Charlie1a DNA MER1_type 166 875 -580 2364 104 0 0 chr5 155734648 155734947 -43895203 + AluSx SINE Alu 1 299 -13 854 75 0 0 chr5 155734958 155735064 -43895086 + FLAM_C SINE Alu 21 126 -17 1729 152 61 7 chr5 155735077 155735354 -43894796 + AluJb SINE Alu 1 292 -20 1324 164 170 0 chr5 155735363 155735687 -43894463 + Charlie1a DNA MER1_type 868 1246 -209 2285 125 0 3 chr5 155735687 155735999 -43894151 + AluSq SINE Alu 1 311 -2 1945 151 7 0 chr5 155736009 155736294 -43893856 + AluSx SINE Alu 1 287 -25 994 206 0 0 chr5 155736623 155736793 -43893357 - FRAM SINE Alu -3 173 4 2231 164 46 42 chr5 155736797 155736898 -43893252 - L1MB8 LINE L1 -4 6174 6075 892 145 113 38 chr5 155736898 155737057 -43893093 - FAM SINE Alu 0 175 5 2231 164 46 42 chr5 155737057 155737480 -43892670 - L1MB8 LINE L1 -103 6075 5648 * 2748 159 18 48 chr5 155737478 155737839 -43892311 - L1MB8 LINE L1 -892 5254 4917 2330 116 3 3 chr5 155737839 155738150 -43892000 + AluSx SINE Alu 1 311 -1 2748 159 18 48 chr5 155738150 155738393 -43891757 - L1MB8 LINE L1 -1229 4917 4668 431 297 85 5 chr5 155738461 155738660 -43891490 + L2 LINE L2 2785 3008 -264 937 212 0 26 chr5 155738674 155738867 -43891283 - AluJo SINE Alu -10 302 115 244 256 200 0 chr5 155738901 155738991 -43891159 + L2 LINE L2 3206 3313 0 268 268 122 0 chr5 155739419 155739501 -43890649 + MER5A DNA MER1_type 98 189 0 1014 189 0 12 chr5 155739788 155739957 -43890193 - AluJo SINE Alu -145 167 1 531 260 313 0 chr5 155740035 155740281 -43889869 + L2 LINE L2 2991 3313 0 1581 143 0 131 chr5 155740373 155740716 -43889434 + AluJo SINE Alu 5 302 0 910 112 16 0 chr5 155740785 155740910 -43889240 + FLAM_C SINE Alu 1 127 -6 2051 110 0 11 chr5 155740915 155741196 -43888954 + AluSq SINE Alu 1 278 -35 1559 138 6 114 chr5 155741231 155741556 -43888594 - AluJo SINE Alu -22 290 1 854 264 130 16 chr5 155741757 155742064 -43888086 + L2 LINE L2 1990 2331 -983 860 111 8 8 chr5 155742068 155742185 -43887965 + AluSq/x SINE Alu 1 117 -195 188 0 74 0 chr5 155742187 155742214 -43887936 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 2463 75 0 3 chr5 155742215 155742520 -43887630 + AluY SINE Alu 1 304 -7 440 195 24 0 chr5 155742549 155742631 -43887519 + L2 LINE L2 2408 2491 -823 493 276 102 15 chr5 155742631 155742831 -43887319 + L1MEc LINE L1 2420 2598 -3942 1217 138 5 21 chr5 155742831 155742847 -43887303 + AluSp SINE Alu 120 135 -178 1951 170 3 3 chr5 155742847 155743153 -43886997 + AluJo SINE Alu 1 306 -6 1217 138 5 21 chr5 155743153 155743307 -43886843 + AluSp SINE Alu 135 289 -24 243 0 0 0 chr5 155743307 155743334 -43886816 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 1217 138 5 21 chr5 155743334 155743351 -43886799 + AluSp SINE Alu 289 305 -8 1696 152 0 63 chr5 155743361 155743508 -43886642 + AluJb SINE Alu 7 128 -184 2002 141 0 3 chr5 155743508 155743824 -43886326 + AluSx SINE Alu 1 315 0 1696 152 0 63 chr5 155743824 155743977 -43886173 + AluJb SINE Alu 128 289 -23 1707 259 108 26 chr5 155743998 155744477 -43885673 + L1MEc LINE L1 2587 3025 -3515 2603 67 0 0 chr5 155744477 155744789 -43885361 + AluSx SINE Alu 1 312 0 1707 259 108 26 chr5 155744789 155744889 -43885261 + L1MEc LINE L1 3025 3115 -3425 423 0 0 0 chr5 155744889 155744936 -43885214 + (TG)n Simple_repeat Simple_repeat 1 47 0 2232 93 0 0 chr5 155744936 155745214 -43884936 - AluY SINE Alu -33 278 1 1707 259 108 26 chr5 155745214 155745887 -43884263 + L1MEc LINE L1 3114 3944 -2596 424 202 43 0 chr5 155745892 155745986 -43884164 + L1ME3A LINE L1 5752 5849 -321 2238 133 3 0 chr5 155745986 155746295 -43883855 - AluSx SINE Alu -2 310 1 2434 107 0 0 chr5 155746323 155746633 -43883517 - AluSg SINE Alu 0 310 1 1334 144 69 119 chr5 155746633 155746857 -43883293 - AluJb SINE Alu -8 304 98 324 0 0 0 chr5 155746857 155746893 -43883257 + (TG)n Simple_repeat Simple_repeat 1 36 0 1334 144 69 119 chr5 155746893 155746987 -43883163 - AluJb SINE Alu -214 98 1 2456 70 34 0 chr5 155747583 155747881 -43882269 - AluSq SINE Alu -5 308 1 2072 103 47 30 chr5 155747947 155748247 -43881903 - AluSx SINE Alu -7 305 1 960 182 6 0 chr5 155748362 155748521 -43881629 - FAM SINE Alu -20 165 6 527 241 181 42 chr5 155749312 155749528 -43880622 - MIR SINE MIR 0 262 17 218 213 0 0 chr5 155750270 155750317 -43879833 + T-rich Low_complexity Low_complexity 1 47 0 414 274 0 10 chr5 155750554 155750656 -43879494 - MIR SINE MIR -70 192 92 * 717 282 83 75 chr5 155750654 155751007 -43879143 + L2 LINE L2 2807 3166 -147 2273 115 3 3 chr5 155751007 155751320 -43878830 - AluSq SINE Alu 0 313 1 717 282 83 75 chr5 155751320 155751434 -43878716 + L2 LINE L2 3166 3278 -35 2191 133 0 13 chr5 155751467 155751782 -43878368 - AluJb SINE Alu -1 311 1 181 188 0 0 chr5 155751819 155751851 -43878299 - MIR SINE MIR -170 92 61 196 310 69 0 chr5 155752094 155752152 -43877998 + L2 LINE L2 3205 3266 -6 1404 164 160 4 chr5 155752191 155752459 -43877691 - AluJo SINE Alu 0 312 3 467 303 86 0 chr5 155752633 155752785 -43877365 + MIR SINE MIR 95 259 -3 1011 224 35 39 chr5 155754763 155755022 -43875128 - MIR SINE MIR 0 262 5 388 283 22 0 chr5 155755061 155755153 -43874997 - MIR SINE MIR -62 200 107 313 278 14 0 chr5 155756177 155756249 -43873901 + L2 LINE L2 3200 3272 0 207 340 31 10 chr5 155758229 155758326 -43871824 - MIR SINE MIR -80 128 30 300 345 26 0 chr5 155758724 155758840 -43871310 - L2 LINE L2 0 3313 3195 317 303 0 22 chr5 155758867 155758956 -43871194 + (CACG)n Simple_repeat Simple_repeat 1 87 0 632 275 60 30 chr5 155759701 155759934 -43870216 + MIR SINE MIR 1 240 -22 1097 165 6 0 chr5 155761846 155762016 -43868134 - AluJo/FRAM SINE Alu -8 304 134 2270 102 0 7 chr5 155762019 155762328 -43867822 - AluSx SINE Alu 0 307 1 1338 253 69 65 chr5 155762484 155763060 -43867090 + L2 LINE L2 2499 3067 -246 2403 52 3 58 chr5 155763060 155763387 -43866763 - AluY SINE Alu -2 309 1 1338 253 69 65 chr5 155763387 155763629 -43866521 + L2 LINE L2 3067 3307 -6 491 348 7 7 chr5 155764519 155764674 -43865476 + MIR3 SINE MIR 20 174 -34 1849 143 55 3 chr5 155764800 155765093 -43865057 - AluJo SINE Alu -4 308 1 1886 137 0 11 chr5 155765143 155765447 -43864703 + AluJb SINE Alu 1 301 0 25 0 0 0 chr5 155765467 155765492 -43864658 + AT_rich Low_complexity Low_complexity 1 25 0 704 198 93 73 chr5 155765494 155765742 -43864408 - L1MD2 LINE L1 -6 6353 6101 431 282 55 43 chr5 155765756 155765868 -43864282 + MIR SINE MIR 92 208 -54 2045 121 47 0 chr5 155765868 155766166 -43863984 + AluSq SINE Alu 1 312 -1 431 282 55 43 chr5 155766166 155766216 -43863934 + MIR SINE MIR 208 256 -6 938 212 0 0 chr5 155766227 155766392 -43863758 - FRAM SINE Alu 0 166 2 363 270 66 7 chr5 155766547 155766684 -43863466 - MIR SINE MIR -64 198 54 499 265 104 43 chr5 155766783 155766994 -43863156 - MIR SINE MIR -16 246 23 1709 186 10 29 chr5 155767490 155767801 -43862349 + AluJo SINE Alu 1 305 -7 1899 158 7 10 chr5 155767852 155768144 -43862006 + AluJb SINE Alu 1 291 -21 1885 156 23 23 chr5 155768395 155768697 -43861453 - AluJb SINE Alu -10 302 1 902 223 81 12 chr5 155768733 155768865 -43861285 - MER20B DNA MER1_type -2 781 659 2009 150 3 10 chr5 155768865 155769165 -43860985 + AluJo SINE Alu 1 298 -14 902 223 81 12 chr5 155769165 155769355 -43860795 - MER20B DNA MER1_type -124 659 437 346 245 104 17 chr5 155769396 155769620 -43860530 - MER20B DNA MER1_type -486 297 1 396 284 37 0 chr5 155769811 155769920 -43860230 - MIR SINE MIR -41 221 109 2242 116 0 3 chr5 155769982 155770285 -43859865 - AluSx SINE Alu -10 302 1 701 276 38 57 chr5 155771294 155771558 -43858592 - MIR SINE MIR -1 261 3 419 272 102 22 chr5 155771696 155771897 -43858253 + MIR SINE MIR 7 219 -43 248 257 76 48 chr5 155772045 155772150 -43858000 + MIR SINE MIR 26 133 -75 780 309 52 41 chr5 155772436 155772805 -43857345 + L2 LINE L2 2884 3256 -57 783 222 25 78 chr5 155773529 155773772 -43856378 - MIR SINE MIR 0 262 33 21 57 0 0 chr5 155774432 155774467 -43855683 + AT_rich Low_complexity Low_complexity 1 35 0 24 77 0 0 chr5 155774750 155774802 -43855348 + GC_rich Low_complexity Low_complexity 1 52 0 23 0 0 0 chr5 155774826 155774849 -43855301 + GC_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr5 155774950 155774983 -43855167 + GC_rich Low_complexity Low_complexity 1 33 0 527 252 180 29 chr5 155776965 155777171 -43852979 - MIR SINE MIR 0 262 26 228 302 156 21 chr5 155777235 155777331 -43852819 + MIR3 SINE MIR 3 111 -97 2358 113 0 3 chr5 155777339 155777650 -43852500 - AluSx SINE Alu -2 310 1 413 300 44 64 chr5 155780449 155780699 -43849451 - MIR SINE MIR -16 246 2 2240 133 0 9 chr5 155780892 155781207 -43848943 - AluSx SINE Alu 0 312 1 2075 133 3 0 chr5 155781207 155781492 -43848658 - AluSx SINE Alu -18 294 9 2242 119 0 3 chr5 155781812 155782124 -43848026 + AluSq SINE Alu 2 312 -1 570 263 24 37 chr5 155782412 155782616 -43847534 - MIR SINE MIR -50 212 17 804 228 73 30 chr5 155783051 155783283 -43846867 + MIR SINE MIR 21 262 0 408 296 90 41 chr5 155783408 155783622 -43846528 + MIR SINE MIR 16 238 -24 285 323 50 10 chr5 155784130 155784229 -43845921 + MIR3 SINE MIR 14 116 -92 2356 102 3 6 chr5 155784374 155784687 -43845463 + AluSx SINE Alu 1 312 0 2633 64 0 3 chr5 155786091 155786403 -43843747 - AluY SINE Alu 0 311 1 244 273 93 62 chr5 155786406 155786567 -43843583 + MIR SINE MIR 45 210 -52 242 91 36 73 chr5 155787099 155787154 -43842996 + Alu SINE Alu 249 301 -1 195 162 0 0 chr5 155787557 155787594 -43842556 + GA-rich Low_complexity Low_complexity 1 37 0 24 77 0 0 chr5 155787799 155787851 -43842299 + AT_rich Low_complexity Low_complexity 1 52 0 784 259 101 9 chr5 155788707 155788935 -43841215 - MIR SINE MIR -13 249 1 839 267 144 15 chr5 155789066 155789575 -43840575 + L2 LINE L2 2434 3313 0 1394 215 125 45 chr5 155789900 155790011 -43840139 + L1ME3A LINE L1 5579 5680 -490 2214 120 0 3 chr5 155790011 155790311 -43839839 + AluSg SINE Alu 1 299 -11 1394 215 125 45 chr5 155790311 155790688 -43839462 + L1ME3A LINE L1 5680 6106 -64 2124 126 3 35 chr5 155790702 155790842 -43839308 + AluJb SINE Alu 1 144 -168 2479 93 0 3 chr5 155790842 155791152 -43838998 + AluSx SINE Alu 1 309 -3 2124 126 3 35 chr5 155791152 155791329 -43838821 + AluJb SINE Alu 144 308 -4 438 304 135 46 chr5 155791843 155792080 -43838070 - MIR SINE MIR -2 260 3 1984 158 0 34 chr5 155792170 155792493 -43837657 + AluJo SINE Alu 1 312 0 2101 134 0 0 chr5 155792542 155792825 -43837325 + AluSx SINE Alu 10 292 -20 514 312 60 39 chr5 155792905 155793069 -43837081 + MIR SINE MIR 20 192 -70 1855 164 3 3 chr5 155793069 155793362 -43836788 + AluJb SINE Alu 3 295 -17 514 312 60 39 chr5 155793362 155793431 -43836719 + MIR SINE MIR 192 258 -4 267 223 85 96 chr5 155793434 155793528 -43836622 - MIR3 SINE MIR -102 106 14 1793 140 46 21 chr5 155793976 155794284 -43835866 - AluJo SINE Alu 0 312 1 1264 246 103 62 chr5 155794444 155794548 -43835602 - L2 LINE L2 -245 3068 2970 2385 91 3 3 chr5 155794548 155794855 -43835295 + AluSp SINE Alu 2 308 -5 1264 246 103 62 chr5 155794855 155795087 -43835063 - L2 LINE L2 -343 2970 2749 797 156 0 37 chr5 155795087 155795222 -43834928 + FLAM_C SINE Alu 2 131 -2 1264 246 103 62 chr5 155795222 155795507 -43834643 - L2 LINE L2 -564 2749 2356 1332 169 132 44 chr5 155795593 155795866 -43834284 + AluJo SINE Alu 1 297 -15 337 218 13 0 chr5 155795923 155796001 -43834149 - MIR SINE MIR -99 163 85 222 150 0 0 chr5 155796458 155796498 -43833652 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 226 244 252 16 chr5 155797246 155797369 -43832781 + L2 LINE L2 3121 3272 0 222 150 0 0 chr5 155797380 155797420 -43832730 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 471 277 189 34 chr5 155797420 155797626 -43832524 + MIR SINE MIR 6 243 -19 184 286 36 0 chr5 155798738 155798794 -43831356 + MIR SINE MIR 90 147 -61 2198 98 0 14 chr5 155798799 155799096 -43831054 + AluSg SINE Alu 4 296 -14 725 287 144 51 chr5 155799252 155800155 -43829995 - L2 LINE L2 -54 3218 2246 856 265 134 41 chr5 155800186 155800200 -43829950 - MLT1J2 LTR MaLR 0 450 439 1655 154 59 46 chr5 155800200 155800461 -43829689 + AluJb SINE Alu 1 257 -55 219 36 0 0 chr5 155800461 155800489 -43829661 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 2092 130 0 3 chr5 155800489 155800773 -43829377 - AluSx SINE Alu -29 283 1 1655 154 59 46 chr5 155800773 155800816 -43829334 + AluJb SINE Alu 256 310 -2 856 265 134 41 chr5 155800816 155800983 -43829167 - MLT1J2 LTR MaLR -11 439 289 2182 140 0 0 chr5 155800983 155801283 -43828867 - AluSx SINE Alu -11 301 2 856 265 134 41 chr5 155801283 155801511 -43828639 - MLT1J2 LTR MaLR -161 289 2 239 328 104 0 chr5 155801820 155801887 -43828263 - L2 LINE L2 -10 3303 3230 676 237 13 32 chr5 155801900 155802056 -43828094 + L2 LINE L2 3161 3313 0 759 186 0 8 chr5 155802215 155802339 -43827811 - FLAM_C SINE Alu -16 127 5 258 266 119 21 chr5 155802386 155802529 -43827621 - L2 LINE L2 -312 2960 2804 2195 127 0 0 chr5 155802705 155803031 -43827119 + AluSx SINE Alu 1 312 0 289 210 48 0 chr5 155803157 155803219 -43826931 - MIR SINE MIR -70 192 128 195 204 184 0 chr5 155803476 155803525 -43826625 - L2 LINE L2 -93 3179 3122 269 302 217 23 chr5 155803709 155803838 -43826312 - L2 LINE L2 -1 3271 3118 1824 182 3 3 chr5 155804126 155804433 -43825717 - AluJb SINE Alu -5 307 1 309 346 54 22 chr5 155804449 155804634 -43825516 - L2 LINE L2 -212 3060 2870 249 324 162 0 chr5 155804695 155804806 -43825344 + L2 LINE L2 3185 3313 0 35 71 0 0 chr5 155805166 155805236 -43824914 + AT_rich Low_complexity Low_complexity 1 70 0 398 283 14 29 chr5 155805259 155805397 -43824753 + MER5A DNA MER1_type 47 182 -7 1628 146 7 40 chr5 155805427 155805701 -43824449 - AluJb SINE Alu -5 307 43 2426 98 3 0 chr5 155805987 155806292 -43823858 - AluSp SINE Alu -7 306 1 428 330 50 11 chr5 155806453 155806635 -43823515 + MIR3 SINE MIR 11 199 -9 2438 69 3 10 chr5 155806646 155806952 -43823198 - AluSc SINE Alu -5 304 1 1104 31 0 0 chr5 155806963 155807090 -43823060 - AluY SINE Alu -9 302 176 1694 115 158 0 chr5 155807326 155807586 -43822564 + AluSx SINE Alu 1 301 -1 1269 176 0 18 chr5 155807710 155807932 -43822218 + AluJb SINE Alu 85 302 -10 773 306 7 26 chr5 155808330 155808601 -43821549 + MLT1K LTR MaLR 83 348 -240 767 262 126 0 chr5 155809821 155810027 -43820123 - MIR SINE MIR -28 234 3 599 297 68 29 chr5 155810127 155810583 -43819567 + MLT1J LTR MaLR 1 511 0 244 278 14 14 chr5 155810667 155810739 -43819411 + L2 LINE L2 2396 2467 -847 463 254 92 3 chr5 155810741 155810921 -43819229 - L1MA10 LINE L1 -4 6162 5976 956 206 0 0 chr5 155810955 155811146 -43819004 - AluJb SINE Alu 0 313 123 1489 276 87 39 chr5 155811262 155812074 -43818076 + L2 LINE L2 2452 3309 -4 1021 174 36 55 chr5 155812315 155812490 -43817660 - AluJo SINE Alu -1 311 139 2419 97 0 0 chr5 155812490 155812790 -43817360 - AluSg SINE Alu -10 300 1 1021 174 36 55 chr5 155812790 155812833 -43817317 - AluJo SINE Alu -173 139 97 299 155 0 84 chr5 155812833 155812904 -43817246 + AluJ/FRAM SINE Alu 224 288 -14 237 320 78 7 chr5 155812910 155813063 -43817087 + L1MEd LINE L1 931 1094 -5025 758 131 7 85 chr5 155813186 155813339 -43816811 + FLAM_C SINE Alu 3 143 0 180 97 0 0 chr5 155813434 155813465 -43816685 + (CA)n Simple_repeat Simple_repeat 2 32 0 304 301 109 5 chr5 155813479 155813672 -43816478 + HAL1 LINE L1 1412 1624 -883 26 30 0 0 chr5 155813689 155813722 -43816428 + AT_rich Low_complexity Low_complexity 1 33 0 2593 60 0 0 chr5 155813722 155814024 -43816126 + AluY SINE Alu 1 302 -9 1839 142 17 14 chr5 155814026 155814315 -43815835 - AluJo SINE Alu -22 290 1 1554 154 71 117 chr5 155814345 155814526 -43815624 - MLT1C LTR MaLR -8 459 271 2374 83 3 0 chr5 155814526 155814815 -43815335 - AluSp SINE Alu -23 290 1 1554 154 71 117 chr5 155814815 155815019 -43815131 - MLT1C LTR MaLR -196 271 98 1736 195 3 3 chr5 155815019 155815317 -43814833 - AluJo SINE Alu -14 298 1 1554 154 71 117 chr5 155815317 155815409 -43814741 - MLT1C LTR MaLR -369 98 3 2150 137 7 0 chr5 155815492 155815799 -43814351 + AluSx SINE Alu 1 309 -3 285 337 0 0 chr5 155815875 155815958 -43814192 - MIR SINE MIR -163 99 17 953 169 0 35 chr5 155816060 155816263 -43813887 - AluJb SINE Alu 0 315 119 193 309 0 62 chr5 155816416 155816497 -43813653 - L2 LINE L2 -46 3226 3151 393 246 32 189 chr5 155816658 155816812 -43813338 - MIR SINE MIR -7 255 78 2307 90 10 0 chr5 155816812 155817112 -43813038 + AluSx SINE Alu 2 304 -8 1932 125 3 55 chr5 155817115 155817443 -43812707 + AluJb SINE Alu 1 311 -1 393 246 32 189 chr5 155817443 155817564 -43812586 - MIR SINE MIR -186 76 20 201 74 0 0 chr5 155817584 155817611 -43812539 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 303 315 88 39 chr5 155817750 155817933 -43812217 + MER5A DNA MER1_type 1 178 0 351 314 142 10 chr5 156020512 156020716 -43609434 - MIR SINE MIR -12 250 20 219 356 51 8 chr5 156020794 156020912 -43609238 + MIR3 SINE MIR 86 208 0 1460 182 113 10 chr5 156021323 156021625 -43608525 + MER58B DNA MER1_type 5 337 -4 202 301 38 53 chr5 156021628 156021761 -43608389 - L2 LINE L2 -20 3293 3163 1568 114 81 8 chr5 156021806 156022042 -43608108 - AluSx SINE Alu -11 301 49 2535 73 0 0 chr5 156022411 156022714 -43607436 - AluY SINE Alu -8 303 1 2331 105 3 0 chr5 156023255 156023551 -43606599 - AluSx SINE Alu -11 301 5 336 280 10 0 chr5 156023611 156023711 -43606439 + MER103 DNA DNA 3 103 -63 429 235 102 105 chr5 156024209 156024533 -43605617 - MLT1J LTR MaLR -92 523 201 562 234 160 11 chr5 156024611 156024799 -43605351 + MIR SINE MIR 32 247 -15 580 304 73 5 chr5 156025332 156025536 -43604614 + MIR SINE MIR 37 254 -8 2219 112 0 3 chr5 156025556 156025859 -43604291 - AluSg SINE Alu -8 302 1 428 173 91 0 chr5 156025886 156025994 -43604156 - L1ME2 LINE L1 -5 6161 6029 397 217 79 66 chr5 156026390 156026542 -43603608 + MLT1K LTR MaLR 364 517 -71 2237 105 7 0 chr5 156027119 156027414 -43602736 - AluSx SINE Alu -15 297 1 244 230 177 9 chr5 156027588 156027701 -43602449 + MIR SINE MIR 75 206 -56 1087 150 0 0 chr5 156027704 156027864 -43602286 - AluSg/x SINE Alu -12 300 141 210 299 0 0 chr5 156027871 156027938 -43602212 + MIR SINE MIR 195 261 -1 21 36 0 0 chr5 156027948 156027976 -43602174 + AT_rich Low_complexity Low_complexity 1 28 0 278 224 0 0 chr5 156028084 156028116 -43602034 + MLT1F LTR MaLR 1 32 -563 406 191 52 13 chr5 156028116 156028242 -43601908 + MLT1F LTR MaLR 1 171 -378 1311 201 125 75 chr5 156028242 156028689 -43601461 - MER66A LTR ERV1 0 599 97 498 226 97 67 chr5 156028756 156029098 -43601052 + MLT1F LTR MaLR 149 542 0 688 153 16 32 chr5 156029317 156029441 -43600709 - FLAM_C SINE Alu -17 126 5 210 250 54 0 chr5 156029613 156029669 -43600481 + L2 LINE L2 3184 3242 -30 321 298 8 58 chr5 156029986 156030107 -43600043 - L2 LINE L2 -22 3250 3136 44 35 0 0 chr5 156031132 156031190 -43598960 + GC_rich Low_complexity Low_complexity 1 58 0 205 360 27 0 chr5 156032896 156032971 -43597179 - L2 LINE L2 -5 3267 3191 5916 140 17 47 chr5 156034828 156035901 -43594249 - L1MC2 LINE L1 -3 6341 5299 1802 178 36 3 chr5 156035901 156036261 -43593889 - L1MB4 LINE L1 -7 6173 5802 5916 140 17 47 chr5 156036261 156036280 -43593870 - L1MC2 LINE L1 -1045 5299 5281 805 133 0 30 chr5 156036568 156036703 -43593447 - FLAM_C SINE Alu -12 131 1 3725 185 24 35 chr5 156036703 156037523 -43592627 - L1MB7 LINE L1 -46 6138 5328 1193 284 104 14 chr5 156038131 156038688 -43591462 - L2 LINE L2 -346 2968 2362 586 299 39 35 chr5 156038847 156039185 -43590965 - L1MC4a LINE L1 -1853 5955 5617 198 0 0 0 chr5 156039855 156039877 -43590273 + (TG)n Simple_repeat Simple_repeat 2 23 0 931 278 109 3 chr5 156040545 156040868 -43589282 - L1MC4a LINE L1 -299 5822 5555 2210 96 0 14 chr5 156042152 156042445 -43587705 - AluY SINE Alu -22 289 1 242 318 123 22 chr5 156042531 156042808 -43587342 - L2 LINE L2 -840 2474 2170 693 187 123 7 chr5 156042815 156042970 -43587180 - MER5B DNA MER1_type 0 178 6 793 212 9 51 chr5 156045132 156045349 -43584801 - L1MB8 LINE L1 0 6178 5971 2303 61 0 14 chr5 156045358 156045638 -43584512 - AluY SINE Alu -9 302 27 217 182 36 36 chr5 156046263 156046318 -43583832 + CT-rich Low_complexity Low_complexity 1 55 0 1470 168 30 53 chr5 156046411 156046715 -43583435 - AluJo SINE Alu -15 297 1 1389 199 11 26 chr5 156046739 156047006 -43583144 - AluJo SINE Alu -23 289 27 2305 79 52 0 chr5 156047088 156047378 -43582772 - AluSg SINE Alu -5 305 1 256 198 215 16 chr5 156048209 156048330 -43581820 - L1ME4a LINE L1 -9 6112 5968 290 268 63 24 chr5 156048337 156048464 -43581686 - L1ME4a LINE L1 -257 5864 5733 2285 97 0 23 chr5 156048495 156048803 -43581347 - AluSx SINE Alu -11 301 1 2031 142 32 15 chr5 156048991 156049329 -43580821 - MER2 DNA MER2_type 0 344 1 415 298 96 11 chr5 156049342 156049530 -43580620 - MIR SINE MIR -8 254 51 235 318 71 0 chr5 156049606 156049691 -43580459 + MIR SINE MIR 118 208 -54 518 300 86 15 chr5 156050513 156050780 -43579370 - L2 LINE L2 0 3313 3028 407 313 108 16 chr5 156050971 156051433 -43578717 + L2 LINE L2 2665 3146 -167 1020 59 0 0 chr5 156051586 156051704 -43578446 - AluSc SINE Alu -15 294 177 2068 92 82 0 chr5 156052185 156052466 -43577684 + AluSq SINE Alu 1 304 -9 198 0 0 0 chr5 156053757 156053779 -43576371 + (T)n Simple_repeat Simple_repeat 1 22 0 2191 136 7 0 chr5 156054081 156054390 -43575760 - AluSx SINE Alu -1 311 1 475 271 23 41 chr5 156054466 156054687 -43575463 - MLT1K LTR MaLR -28 560 344 857 196 48 32 chr5 156055461 156055650 -43574500 - MER58C DNA MER1_type 0 215 24 500 217 75 62 chr5 156055654 156055815 -43574335 + MIR SINE MIR 23 185 -77 575 251 184 37 chr5 156056413 156056559 -43573591 + L2 LINE L2 3003 3126 -187 333 0 0 0 chr5 156056559 156056596 -43573554 + (TG)n Simple_repeat Simple_repeat 2 38 0 575 251 184 37 chr5 156056596 156056720 -43573430 + L2 LINE L2 3126 3313 0 544 305 18 0 chr5 156056776 156056940 -43573210 + MIR3 SINE MIR 36 202 -6 187 204 0 23 chr5 156057592 156057636 -43572514 - L2 LINE L2 -557 2757 2715 315 304 158 29 chr5 156058143 156058480 -43571670 + L2 LINE L2 2678 3061 -211 283 297 135 18 chr5 156059348 156059459 -43570691 + L2 LINE L2 3187 3310 -3 1813 198 34 16 chr5 156059597 156059980 -43570170 - MSTD LTR MaLR -3 393 4 213 139 0 0 chr5 156060338 156060381 -43569769 + (TC)n Simple_repeat Simple_repeat 1 43 0 2281 102 26 0 chr5 156060406 156060710 -43569440 - AluSq SINE Alu -1 312 1 1092 189 51 5 chr5 156062450 156062646 -43567504 + MER6B DNA MER2_type 1 205 -5 359 224 0 44 chr5 156062901 156063019 -43567131 + MIR SINE MIR 103 212 -50 466 146 11 11 chr5 156063235 156063324 -43566826 - MER53 DNA DNA -2 187 99 374 235 43 17 chr5 156063990 156064105 -43566045 - MIR SINE MIR -28 234 117 420 156 13 13 chr5 156064195 156064272 -43565878 + MER116 DNA Mariner 2 78 -2 231 146 0 0 chr5 156064436 156064477 -43565673 + (CTCA)n Simple_repeat Simple_repeat 3 43 0 2330 108 0 0 chr5 156064533 156064838 -43565312 - AluSx SINE Alu -5 307 3 1679 200 45 56 chr5 156064874 156065139 -43565011 - L1ME1 LINE L1 -134 6032 5773 2088 135 6 0 chr5 156065139 156065450 -43564700 - AluSq SINE Alu 0 313 1 1679 200 45 56 chr5 156065450 156065630 -43564520 - L1ME1 LINE L1 -393 5773 5592 1529 196 13 17 chr5 156066142 156066443 -43563707 - AluJb SINE Alu -12 300 1 315 0 0 0 chr5 156066523 156066558 -43563592 + (TG)n Simple_repeat Simple_repeat 2 36 0 189 349 53 0 chr5 156067213 156067345 -43562805 - MIR SINE MIR -32 230 92 2573 77 0 0 chr5 156068003 156068314 -43561836 + AluY SINE Alu 1 311 0 209 231 0 0 chr5 156068462 156068501 -43561649 + T-rich Low_complexity Low_complexity 2 40 0 285 209 0 0 chr5 156069771 156069838 -43560312 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 390 240 47 47 chr5 156069854 156069983 -43560167 - L2 LINE L2 0 3313 3185 309 258 11 54 chr5 156071171 156071264 -43558886 + MIR SINE MIR 139 227 -35 229 295 95 9 chr5 156071458 156071563 -43558587 + MIR SINE MIR 4 117 -145 * 478 258 8 24 chr5 156071557 156071681 -43558469 - L2 LINE L2 -1 3271 3150 * 493 264 34 34 chr5 156071676 156071824 -43558326 + MIR SINE MIR 112 259 -3 1269 200 3 103 chr5 156072305 156072434 -43557716 - AluJo SINE Alu -4 298 158 1740 119 0 4 chr5 156072434 156072687 -43557463 - AluSx SINE Alu -60 252 1 1269 200 3 103 chr5 156072687 156072887 -43557263 - AluJo SINE Alu -144 158 2 2202 63 0 31 chr5 156072978 156073297 -43556853 - AluY SINE Alu -2 309 1 633 179 8 16 chr5 156073297 156073420 -43556730 + L1MD2 LINE L1 6221 6342 -17 225 273 0 0 chr5 156073915 156073959 -43556191 - AluJ/monomer SINE Alu -256 44 1 406 288 38 15 chr5 156074052 156074184 -43555966 + L2 LINE L2 3179 3313 0 197 312 85 60 chr5 156074365 156074564 -43555586 - L2 LINE L2 -221 3051 2848 521 261 75 12 chr5 156076416 156076577 -43553573 + MIR SINE MIR 40 210 -52 300 333 105 18 chr5 156077930 156078101 -43552049 - MER5A DNA MER1_type -3 186 1 306 289 141 0 chr5 156078659 156078787 -43551363 - MIR SINE MIR 0 262 117 243 0 0 0 chr5 156079201 156079228 -43550922 + (T)n Simple_repeat Simple_repeat 1 27 0 579 248 150 0 chr5 156079452 156079605 -43550545 + MER5A DNA MER1_type 13 188 -1 247 111 19 19 chr5 156080482 156080536 -43549614 + (TA)n Simple_repeat Simple_repeat 2 55 0 293 318 94 35 chr5 156080652 156080822 -43549328 + L2 LINE L2 3092 3271 -1 410 296 177 16 chr5 156080893 156081079 -43549071 - MIR SINE MIR 0 262 47 186 43 0 0 chr5 156082031 156082054 -43548096 + (TG)n Simple_repeat Simple_repeat 2 24 0 469 241 36 9 chr5 156083035 156083147 -43547003 + MIR SINE MIR 141 255 -7 411 274 8 17 chr5 156084222 156084339 -43545811 - MIR SINE MIR -50 212 97 259 318 24 12 chr5 156085435 156085520 -43544630 + MIR SINE MIR 4 89 -173 609 272 108 22 chr5 156085539 156085771 -43544379 + MIR SINE MIR 11 262 0 288 239 84 0 chr5 156087147 156087218 -43542932 - MER94 DNA DNA -34 100 24 206 256 0 0 chr5 156087803 156087846 -43542304 - MIR SINE MIR -174 88 46 337 318 0 19 chr5 156088896 156089003 -43541147 + MIR SINE MIR 139 243 -19 207 327 127 40 chr5 156089053 156089557 -43540593 + L2 LINE L2 1858 2405 -909 1168 196 136 74 chr5 156090096 156090463 -43539687 + MLT1B LTR MaLR 1 390 0 328 136 76 144 chr5 156090828 156090946 -43539204 - L1ME4a LINE L1 -2 6119 6010 2026 122 6 22 chr5 156090948 156091260 -43538890 - AluSq SINE Alu -6 307 1 531 210 79 87 chr5 156091279 156091531 -43538619 - L1ME4a LINE L1 -281 5840 5591 667 270 46 21 chr5 156092047 156092284 -43537866 - L1ME3A LINE L1 0 6170 5928 904 254 102 47 chr5 156092353 156092807 -43537343 - MLT1H LTR MaLR 0 549 1 196 235 222 12 chr5 156093605 156093686 -43536464 + MIR SINE MIR 160 257 -5 626 239 75 59 chr5 156093709 156093948 -43536202 - MIR SINE MIR 0 262 20 553 306 44 35 chr5 156094666 156094879 -43535271 - MIR SINE MIR -29 233 20 2032 121 7 3 chr5 156095876 156096174 -43533976 + AluSx SINE Alu 1 299 -13 443 306 73 37 chr5 156096343 156096588 -43533562 + MIR SINE MIR 9 262 0 508 323 25 19 chr5 156096668 156096826 -43533324 - MIR3 SINE MIR -31 177 19 334 250 34 115 chr5 156096890 156097038 -43533112 + MER5A DNA MER1_type 43 178 -11 632 318 31 14 chr5 156097177 156097400 -43532750 - MIR SINE MIR -11 251 25 276 30 0 0 chr5 156097789 156097822 -43532328 + (GGGGA)n Simple_repeat Simple_repeat 4 36 0 772 246 35 25 chr5 156097830 156098029 -43532121 - MLT1G1 LTR MaLR -394 201 1 240 303 13 0 chr5 156098388 156098464 -43531686 - L2 LINE L2 -75 3238 3162 435 249 141 32 chr5 156100539 156100724 -43529426 + MIR SINE MIR 46 250 -12 359 280 27 60 chr5 156101353 156101503 -43528647 - MIR SINE MIR 0 262 118 549 309 91 9 chr5 156101721 156101941 -43528209 + MIR SINE MIR 1 238 -24 2109 118 3 0 chr5 156101951 156102248 -43527902 - AluSx SINE Alu -12 300 3 1915 123 34 0 chr5 156102482 156102774 -43527376 + AluSx SINE Alu 1 302 -10 473 267 25 37 chr5 156103136 156103297 -43526853 - MIR SINE MIR -16 246 88 215 192 211 0 chr5 156104814 156104866 -43525284 - MIR SINE MIR -44 218 156 726 272 42 5 chr5 156104933 156105146 -43525004 + MIR SINE MIR 42 262 0 217 311 89 11 chr5 156105160 156105250 -43524900 - MIR SINE MIR -101 161 65 2377 54 3 0 chr5 156105262 156105556 -43524594 - AluSp SINE Alu -18 295 1 266 233 155 19 chr5 156105852 156105955 -43524195 + L2 LINE L2 3197 3313 0 189 26 51 26 chr5 156108331 156108370 -43521780 + (CAA)n Simple_repeat Simple_repeat 2 41 0 540 301 125 0 chr5 156108384 156108600 -43521550 + MIR SINE MIR 3 245 -17 2209 100 3 0 chr5 156108996 156109296 -43520854 - AluSx SINE Alu -11 301 1 1792 170 0 19 chr5 156111072 156111390 -43518760 - AluSx SINE Alu 0 312 1 469 242 258 26 chr5 156111410 156111600 -43518550 + MIR SINE MIR 28 261 -1 225 250 19 0 chr5 156111779 156111831 -43518319 + L2 LINE L2 3261 3313 0 328 279 12 0 chr5 156111997 156112083 -43518067 - L1MA10 LINE L1 -29 6305 6219 469 304 73 14 chr5 156112209 156112429 -43517721 + L2 LINE L2 3078 3310 -3 291 240 67 27 chr5 156113551 156113626 -43516524 - L2 LINE L2 -5 3308 3231 271 236 122 41 chr5 156113704 156113827 -43516323 + L2 LINE L2 3179 3311 -2 1849 203 88 14 chr5 156114432 156114466 -43515684 - MLT1C LTR MaLR 0 467 437 2044 138 55 3 chr5 156114466 156114793 -43515357 - MER2 DNA MER2_type 0 344 1 1849 203 88 14 chr5 156114793 156115176 -43514974 - MLT1C LTR MaLR -30 437 19 367 318 9 27 chr5 156115754 156115864 -43514286 - MER5A DNA MER1_type 0 189 82 267 133 0 0 chr5 156115912 156115957 -43514193 + (GA)n Simple_repeat Simple_repeat 2 46 0 309 141 0 0 chr5 156115960 156116031 -43514119 + (TG)n Simple_repeat Simple_repeat 2 72 0 502 273 141 68 chr5 156116491 156117194 -43512956 - L2 LINE L2 0 3313 2547 4642 194 58 8 chr5 156117247 156118196 -43511954 - MER45B DNA AcHobo -44 996 1 297 266 127 0 chr5 156118781 156118860 -43511290 - MER5A DNA MER1_type -5 184 96 361 316 44 0 chr5 156119572 156119708 -43510442 - MIR SINE MIR -2 260 119 2190 83 10 3 chr5 156121005 156121305 -43508845 - AluSg SINE Alu -8 302 1 274 158 35 0 chr5 156121460 156121517 -43508633 - L2 LINE L2 0 3272 3214 495 188 256 0 chr5 156121584 156121717 -43508433 + MER5A DNA MER1_type 15 181 -8 433 250 116 27 chr5 156122638 156122785 -43507365 - MIR SINE MIR -59 203 45 256 196 0 0 chr5 156123140 156123191 -43506959 - L2 LINE L2 -2 3311 3261 207 0 0 0 chr5 156123377 156123400 -43506750 + (T)n Simple_repeat Simple_repeat 1 23 0 247 252 50 50 chr5 156123618 156123757 -43506393 + L2 LINE L2 2708 2846 -468 198 103 0 0 chr5 156123922 156123951 -43506199 + (T)n Simple_repeat Simple_repeat 1 29 0 667 256 83 0 chr5 156124186 156124366 -43505784 + MIR SINE MIR 2 196 -66 360 0 0 0 chr5 156125190 156125230 -43504920 + (TG)n Simple_repeat Simple_repeat 2 41 0 1911 95 0 50 chr5 156126813 156127096 -43503054 - AluSg SINE Alu -1 309 41 201 277 121 48 chr5 156128340 156128423 -43501727 - MIR SINE MIR -72 136 48 275 278 28 56 chr5 156128441 156128585 -43501565 - MLT1K LTR MaLR -447 141 2 348 292 111 32 chr5 156131472 156131688 -43498462 + Charlie8 DNA MER1_type 1 233 -2184 241 305 53 21 chr5 156132835 156132930 -43497220 + MIR SINE MIR 20 117 -91 204 301 133 0 chr5 156133163 156133246 -43496904 + L2 LINE L2 3159 3252 -20 1847 155 4 7 chr5 156133376 156133653 -43496497 - AluJo SINE Alu -31 281 6 613 234 32 6 chr5 156133921 156134079 -43496071 - MIR SINE MIR -61 201 40 25 0 0 0 chr5 156134080 156134105 -43496045 + AT_rich Low_complexity Low_complexity 1 25 0 1803 140 29 32 chr5 156134110 156134418 -43495732 + AluJb SINE Alu 1 307 -5 262 319 21 102 chr5 156134828 156135063 -43495087 + L2 LINE L2 2966 3181 -91 222 315 161 0 chr5 156135109 156135258 -43494892 - MIR3 SINE MIR -3 205 33 729 207 49 0 chr5 156135306 156135470 -43494680 - MER5B DNA MER1_type -6 172 1 407 239 11 0 chr5 156135929 156136021 -43494129 - MIR3 SINE MIR -34 174 82 233 179 0 18 chr5 156136151 156136207 -43493943 + (TG)n Simple_repeat Simple_repeat 2 56 0 558 305 72 8 chr5 156136234 156136483 -43493667 - L2 LINE L2 -226 3087 2823 595 288 77 14 chr5 156137518 156137740 -43492410 - Charlie8 DNA MER1_type -2181 236 1 2241 82 7 3 chr5 156137869 156138161 -43491989 + AluSg SINE Alu 1 293 -17 782 288 35 4 chr5 156139737 156139963 -43490187 + MIR SINE MIR 1 233 -29 312 275 145 0 chr5 156140033 156140164 -43489986 - L2 LINE L2 -1 3271 3122 332 289 35 0 chr5 156140310 156140424 -43489726 - MIR SINE MIR -8 254 137 293 303 110 21 chr5 156140438 156140583 -43489567 - MIR3 SINE MIR -24 184 27 541 281 157 20 chr5 156141264 156141609 -43488541 + L2 LINE L2 2921 3312 -1 469 239 72 14 chr5 156141852 156141990 -43488160 + MIR SINE MIR 14 159 -103 199 295 78 78 chr5 156143112 156143370 -43486780 - L3 LINE CR1 -11 1566 1309 22 35 0 0 chr5 156144344 156144373 -43485777 + AT_rich Low_complexity Low_complexity 1 29 0 274 350 8 8 chr5 156144883 156145003 -43485147 + MIR SINE MIR 23 142 -66 1760 86 0 47 chr5 156145379 156145636 -43484514 + AluSc SINE Alu 65 309 0 452 247 68 17 chr5 156145697 156145875 -43484275 - MIR SINE MIR -10 252 62 299 252 9 45 chr5 156145985 156146096 -43484054 - MIR3 SINE MIR -13 195 89 233 310 103 0 chr5 156146383 156146499 -43483651 - L2 LINE L2 -2 3311 3184 457 288 16 8 chr5 156146829 156146954 -43483196 - L2 LINE L2 0 3313 3188 2186 106 0 17 chr5 156146961 156147254 -43482896 + AluSx SINE Alu 1 288 -24 2437 84 3 3 chr5 156147483 156147791 -43482359 + AluSp SINE Alu 1 308 -5 396 0 0 0 chr5 156147791 156147835 -43482315 + (TA)n Simple_repeat Simple_repeat 2 45 0 230 215 62 0 chr5 156147857 156147922 -43482228 - MER112 DNA MER1_type -174 86 18 510 253 131 59 chr5 156147936 156148324 -43481826 - L2 LINE L2 -338 2976 2561 22 0 0 0 chr5 156149445 156149467 -43480683 + AT_rich Low_complexity Low_complexity 1 22 0 428 295 11 100 chr5 156149974 156150235 -43479915 + MIR SINE MIR 25 262 0 5761 126 48 28 chr5 156150322 156150628 -43479522 - L1MA4 LINE L1 -5 6295 5997 2254 88 25 0 chr5 156150628 156150913 -43479237 - AluSc SINE Alu -17 292 1 5761 126 48 28 chr5 156150913 156151615 -43478535 - L1MA4 LINE L1 -303 5997 5267 2387 85 0 7 chr5 156152860 156153167 -43476983 - AluSc SINE Alu -4 305 1 845 142 0 57 chr5 156153340 156153481 -43476669 + FLAM_C SINE Alu 1 133 0 272 312 87 22 chr5 156154056 156154194 -43475956 - MLT1H LTR MaLR -2 547 401 221 308 0 0 chr5 156154195 156154247 -43475903 + polypyrimidine Low_complexity Low_complexity 4 55 0 988 224 48 24 chr5 156154340 156154590 -43475560 + MIR SINE MIR 7 262 0 491 223 99 0 chr5 156155140 156155261 -43474889 + MER5A DNA MER1_type 57 189 0 550 268 37 0 chr5 156155317 156155481 -43474669 - MIR SINE MIR -34 228 59 232 315 0 0 chr5 156155784 156155873 -43474277 - L1MC4 LINE L1 -1340 6702 6614 268 274 0 32 chr5 156156294 156156389 -43473761 - MIR SINE MIR -43 219 128 1746 182 89 36 chr5 156156482 156156921 -43473229 - MLT1C LTR MaLR 0 467 6 423 276 50 79 chr5 156158665 156158944 -43471206 + L3b LINE CR1 1105 1375 -208 658 253 84 4 chr5 156159236 156159461 -43470689 + MIR SINE MIR 20 262 0 710 296 110 54 chr5 156160438 156160810 -43469340 - LTR16A LTR ERVL -6 444 52 366 333 42 12 chr5 156160833 156160998 -43469152 + MER5A DNA MER1_type 19 188 -1 1889 118 3 93 chr5 156161842 156162174 -43467976 + AluJb SINE Alu 1 302 -10 23 0 0 0 chr5 156163028 156163051 -43467099 + AT_rich Low_complexity Low_complexity 1 23 0 558 184 57 170 chr5 156163056 156163338 -43466812 - L1MC4 LINE L1 0 8042 7793 479 97 0 28 chr5 156163342 156163414 -43466736 - MADE1 DNA Mariner 0 80 11 364 123 15 31 chr5 156163398 156163463 -43466687 - MADE1 DNA Mariner -16 64 1 * 2709 201 48 69 chr5 156163464 156164303 -43465847 - L1MC4 LINE L1 -264 7778 6927 38 0 0 0 chr5 156165539 156165577 -43464573 + AT_rich Low_complexity Low_complexity 1 38 0 1156 263 52 56 chr5 156165810 156166420 -43463730 - MLT1G1 LTR MaLR 0 590 1 350 264 109 26 chr5 156166550 156166930 -43463220 - L1MEc LINE L1 -4867 1549 1264 194 333 0 0 chr5 156167629 156167707 -43462443 + MIR SINE MIR 164 241 -21 262 261 80 67 chr5 156167808 156167945 -43462205 - MIR3 SINE MIR -49 159 22 2276 105 3 3 chr5 156168088 156168392 -43461758 + AluSx SINE Alu 1 304 -8 440 188 168 0 chr5 156168392 156168493 -43461657 - AluJo/FLAM SINE Alu -184 118 1 232 298 201 41 chr5 156168822 156169132 -43461018 + L2 LINE L2 2715 3085 -187 1239 239 57 45 chr5 156169793 156170216 -43459934 + L1ME1 LINE L1 5749 6176 -2 220 311 34 34 chr5 156170218 156170337 -43459813 - L2 LINE L2 -18 3295 3177 208 180 0 33 chr5 156171015 156171076 -43459074 + CT-rich Low_complexity Low_complexity 2 60 0 747 283 102 0 chr5 156171995 156172200 -43457950 + MIR SINE MIR 37 262 0 2388 101 0 3 chr5 156172985 156173291 -43456859 - AluSx SINE Alu -7 305 1 235 371 22 0 chr5 156174044 156174133 -43456017 + MER5A DNA MER1_type 66 156 -33 254 277 146 22 chr5 156174506 156174643 -43455507 - MIR SINE MIR -78 184 31 2336 100 3 0 chr5 156174669 156174969 -43455181 - AluSx SINE Alu -11 301 1 609 216 7 58 chr5 156175326 156175465 -43454685 - FLAM_A SINE Alu -1 132 1 2145 102 0 0 chr5 156175748 156176077 -43454073 - AluSx SINE Alu 0 329 1 2435 159 63 20 chr5 156176676 156177123 -43453027 + MLT1C LTR MaLR 2 467 0 205 259 47 47 chr5 156177169 156177254 -43452896 - L3 LINE CR1 -84 1493 1409 2048 141 0 16 chr5 156177345 156177650 -43452500 + AluSx SINE Alu 1 300 -12 184 254 85 0 chr5 156178593 156178652 -43451498 - L2 LINE L2 -20 3293 3230 318 254 0 14 chr5 156179322 156179393 -43450757 + MIR SINE MIR 47 116 -146 26 0 0 0 chr5 156179803 156179829 -43450321 + AT_rich Low_complexity Low_complexity 1 26 0 180 0 0 0 chr5 156180052 156180072 -43450078 + (TG)n Simple_repeat Simple_repeat 2 21 0 333 303 0 0 chr5 156181183 156181259 -43448891 + L2 LINE L2 3230 3305 -8 2241 65 0 4 chr5 156181488 156181765 -43448385 - AluY SINE Alu -7 304 29 244 173 0 40 chr5 156181828 156181903 -43448247 + CT-rich Low_complexity Low_complexity 3 74 0 939 247 32 28 chr5 156181956 156182203 -43447947 + MIR SINE MIR 2 249 -13 393 288 47 9 chr5 156182647 156182848 -43447302 + Charlie8 DNA MER1_type 1 275 -2142 3257 227 53 42 chr5 156184792 156185854 -43444296 - L1ME3 LINE L1 -2 6160 5101 806 282 0 19 chr5 156186209 156186422 -43443728 + MIR SINE MIR 24 232 -30 2182 92 10 3 chr5 156186569 156186861 -43443289 - AluSc SINE Alu -15 294 1 379 310 69 0 chr5 156187593 156187767 -43442383 - MER5A DNA MER1_type -2 187 2 189 220 136 0 chr5 156189062 156189121 -43441029 + MIR SINE MIR 177 243 -19 230 349 0 23 chr5 156189287 156189373 -43440777 - L2 LINE L2 -1 3271 3188 725 265 27 5 chr5 156190876 156191061 -43439089 - MIR SINE MIR -5 257 69 526 270 156 32 chr5 156191061 156191461 -43438689 - MLT1J LTR MaLR 0 511 8 407 279 197 64 chr5 156192708 156192951 -43437199 - MLT1K LTR MaLR -11 577 368 1123 208 22 31 chr5 156192951 156193177 -43436973 - MER58A DNA MER1_type 0 224 1 407 279 197 64 chr5 156193177 156193323 -43436827 - MLT1K LTR MaLR -220 368 136 4628 230 47 42 chr5 156193503 156193735 -43436415 + L1MD2 LINE L1 4015 4245 -2114 342 0 0 0 chr5 156193735 156193773 -43436377 + (CA)n Simple_repeat Simple_repeat 2 39 0 4628 230 47 42 chr5 156193773 156194795 -43435355 + L1MD2 LINE L1 4245 5261 -1098 207 0 0 0 chr5 156194795 156194818 -43435332 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 4628 230 47 42 chr5 156194818 156195890 -43434260 + L1MD2 LINE L1 5261 6346 -13 346 200 0 0 chr5 156196636 156196696 -43433454 - MER116 DNA Mariner -13 67 8 199 273 13 52 chr5 156196787 156196864 -43433286 - MIR3 SINE MIR -126 82 9 486 293 148 9 chr5 156197280 156197509 -43432641 + MIR SINE MIR 2 262 0 216 298 36 24 chr5 156197521 156197605 -43432545 + MIR SINE MIR 22 106 -102 4993 108 41 14 chr5 156197947 156198420 -43431730 - L1PA13 LINE L1 -3 6160 5658 2532 68 3 0 chr5 156198420 156198730 -43431420 + AluY SINE Alu 1 311 0 4993 108 41 14 chr5 156198730 156199016 -43431134 - L1PA13 LINE L1 -505 5658 5381 311 235 25 37 chr5 156199631 156199712 -43430438 + L2 LINE L2 3225 3304 -9 805 160 71 0 chr5 156199860 156200029 -43430121 - Charlie4 DNA MER1_type 0 1961 1781 827 193 134 15 chr5 156200068 156200270 -43429880 - Charlie4 DNA MER1_type -1720 241 16 2108 128 3 3 chr5 156200402 156200707 -43429443 - AluSx SINE Alu -7 305 1 237 244 0 0 chr5 156200776 156200821 -43429329 + L2 LINE L2 3261 3305 -8 2021 182 16 19 chr5 156200904 156201267 -43428883 - MLT1A1 LTR MaLR 0 365 4 788 248 59 67 chr5 156201915 156202336 -43427814 - L1ME LINE L1 -373 5748 5339 188 179 0 0 chr5 156202336 156202364 -43427786 + MIR SINE MIR 204 231 -31 1122 221 28 21 chr5 156203294 156203583 -43426567 - L1MC4a LINE L1 0 7808 7518 270 0 0 0 chr5 156204722 156204752 -43425398 + (A)n Simple_repeat Simple_repeat 1 30 0 348 277 20 10 chr5 156205349 156205450 -43424700 + L2 LINE L2 3171 3272 -41 1032 199 0 0 chr5 156205507 156205673 -43424477 + FAM SINE Alu 2 167 -8 226 261 18 0 chr5 156205952 156206063 -43424087 + (TATATG)n Simple_repeat Simple_repeat 4 116 0 2193 116 0 10 chr5 156206453 156206756 -43423394 + AluSx SINE Alu 1 300 -12 757 0 21 0 chr5 156206795 156206888 -43423262 + (GA)n Simple_repeat Simple_repeat 1 95 0 318 282 0 0 chr5 156208583 156208686 -43421464 + C-rich Low_complexity Low_complexity 4 106 0 2161 122 0 0 chr5 156208686 156208973 -43421177 - AluSx SINE Alu -25 287 1 189 162 81 0 chr5 156209231 156209268 -43420882 + L3 LINE CR1 1536 1575 -2 1069 242 128 31 chr5 156209439 156209860 -43420290 - MLT1C LTR MaLR 0 467 6 2226 86 7 7 chr5 156210332 156210622 -43419528 - AluSg1 SINE Alu -19 290 1 268 232 81 40 chr5 156210850 156210949 -43419201 - L2 LINE L2 -5 3308 3206 1424 163 64 32 chr5 156212610 156212709 -43417441 + AluJb SINE Alu 1 95 -217 378 0 0 0 chr5 156212709 156212751 -43417399 + (CA)n Simple_repeat Simple_repeat 2 43 0 1424 163 64 32 chr5 156212751 156212934 -43417216 + AluJb SINE Alu 95 292 -20 1880 140 14 4 chr5 156213918 156214219 -43415931 + AluJo SINE Alu 2 305 0 2652 98 14 25 chr5 156214297 156214656 -43415494 - THE1A LTR MaLR 0 355 1 1911 154 3 3 chr5 156216008 156216301 -43413849 + AluJo SINE Alu 1 293 -19 870 181 0 0 chr5 156216410 156216568 -43413582 + FLAM_C SINE Alu 1 158 0 368 330 90 17 chr5 156216621 156216810 -43413340 - MIR3 SINE MIR 0 208 1 2187 230 79 25 chr5 156216901 156217493 -43412657 - MLT1E3 LTR MaLR 0 624 1 1125 172 167 26 chr5 156217935 156218168 -43411982 + Tigger7 DNA MER2_type 2 267 -2220 414 209 44 0 chr5 156218166 156218257 -43411893 + Tigger7 DNA MER2_type 2393 2487 0 * 520 291 112 55 chr5 156218412 156218797 -43411353 + L2 LINE L2 2875 3281 -32 1939 150 0 3 chr5 156218837 156219130 -43411020 + AluJb SINE Alu 3 294 -18 4786 117 18 7 chr5 156220420 156220803 -43409347 - L1PA13 LINE L1 0 6163 5768 300 111 0 0 chr5 156220803 156220848 -43409302 + (TG)n Simple_repeat Simple_repeat 2 46 0 4786 117 18 7 chr5 156220848 156221149 -43409001 - L1PA13 LINE L1 -395 5768 5472 224 151 11 172 chr5 156221236 156221329 -43408821 + L2 LINE L2 3009 3086 -227 865 240 54 68 chr5 156221866 156222158 -43407992 + MER113 DNA MER1_type? 5 291 -230 225 0 0 0 chr5 156222158 156222183 -43407967 + (CA)n Simple_repeat Simple_repeat 2 26 0 865 240 54 68 chr5 156222183 156222315 -43407835 + MER113 DNA MER1_type? 291 423 -98 8561 59 7 7 chr5 156222379 156223386 -43406764 - LTR13 LTR ERVK 0 1007 1 628 0 0 50 chr5 156224330 156224410 -43405740 - L1PA8 LINE L1 -1 6171 6096 233 208 0 0 chr5 156224636 156224684 -43405466 + (CA)n Simple_repeat Simple_repeat 1 48 0 1128 47 0 0 chr5 156225109 156225236 -43404914 + AluY SINE Alu 1 127 -184 243 125 0 0 chr5 156225665 156225705 -43404445 + (TCC)n Simple_repeat Simple_repeat 1 40 0 898 185 53 11 chr5 156225740 156225929 -43404221 - MIR SINE MIR -64 198 2 309 289 12 0 chr5 156226401 156226484 -43403666 + L2 LINE L2 3226 3309 -4 1608 188 33 16 chr5 156226527 156226710 -43403440 - AluJb SINE Alu -3 309 118 180 0 0 0 chr5 156226710 156226730 -43403420 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1608 188 33 16 chr5 156226730 156226850 -43403300 - AluJb SINE Alu -194 118 1 182 364 91 10 chr5 156227783 156227882 -43402268 - L2 LINE L2 -22 3291 3185 820 234 153 42 chr5 156227950 156228374 -43401776 - MLT1K LTR MaLR -47 541 13 208 318 132 16 chr5 156229225 156229354 -43400796 - MIR SINE MIR -11 251 108 2305 102 0 0 chr5 156229509 156229804 -43400346 + AluSx SINE Alu 1 295 -17 900 256 59 57 chr5 156230148 156230519 -43399631 - L1MA9 LINE L1 -38 6274 5903 24 77 0 0 chr5 156230597 156230649 -43399501 + AT_rich Low_complexity Low_complexity 1 52 0 244 298 65 24 chr5 156232761 156232885 -43397265 + MIR3 SINE MIR 31 159 -49 2750 10 0 0 chr5 156233050 156233344 -43396806 - AluYa5 SINE Alu -17 294 1 249 132 0 0 chr5 156233486 156233524 -43396626 - U3 snRNA snRNA -179 38 1 533 244 65 74 chr5 156234738 156234955 -43395195 - MLT1K LTR MaLR -185 403 189 510 303 115 4 chr5 156236389 156236623 -43393527 + MIR SINE MIR 2 261 -1 21 57 0 0 chr5 156236661 156236696 -43393454 + AT_rich Low_complexity Low_complexity 1 35 0 330 296 35 30 chr5 156236864 156237063 -43393087 + L1MC5 LINE L1 7477 7676 -285 2395 211 35 79 chr5 156237887 156238265 -43391885 - L1ME3 LINE L1 -87 6075 5712 2096 115 4 0 chr5 156238265 156238607 -43391543 - AluSq SINE Alu 0 347 5 2395 211 35 79 chr5 156238607 156238989 -43391161 - L1ME3 LINE L1 -450 5712 5314 531 288 125 0 chr5 156239092 156239276 -43390874 + MIR SINE MIR 12 218 -44 2046 125 7 0 chr5 156241139 156241428 -43388722 - AluSx SINE Alu -21 291 1 430 300 120 66 chr5 156241828 156242311 -43387839 - MLT1J LTR MaLR -2 509 1 5663 124 69 3 chr5 156242543 156243440 -43386710 + Tigger3b DNA MER2_type 1 956 -275 41193 64 12 2 chr5 156243440 156249518 -43380632 - L1PA5 LINE L1 -11 6143 3 2039 108 18 0 chr5 156249518 156249804 -43380346 + Tigger3b DNA MER2_type 942 1232 0 243 317 103 33 chr5 156249822 156250065 -43380085 - L1ME LINE L1 -546 5575 5316 2273 93 23 0 chr5 156250347 156250649 -43379501 - AluY SINE Alu -2 309 1 2209 102 3 46 chr5 156250896 156251082 -43379068 - AluSx SINE Alu -3 309 141 2837 16 0 0 chr5 156251082 156251390 -43378760 - AluYb8 SINE Alu -10 308 1 2209 102 3 46 chr5 156251390 156251526 -43378624 - AluSx SINE Alu -171 141 1 1433 160 3 100 chr5 156251561 156251880 -43378270 - AluJo SINE Alu -13 299 12 267 160 0 20 chr5 156251946 156251996 -43378154 - L2 LINE L2 -2 3311 3263 276 250 233 9 chr5 156252669 156252785 -43377365 - MIR SINE MIR -14 248 107 7152 60 10 37 chr5 156252826 156254124 -43376026 + L1PA7 LINE L1 4869 6153 -1 2194 116 10 13 chr5 156254133 156254436 -43375714 + AluSx SINE Alu 1 302 -10 200 259 34 109 chr5 156254590 156254829 -43375321 - L2 LINE L2 -966 2348 2128 345 202 180 34 chr5 156254848 156254937 -43375213 + L1ME LINE L1 5521 5622 -548 483 200 87 0 chr5 156254940 156255055 -43375095 - MER58 DNA MER1_type -2150 270 146 2633 219 37 48 chr5 156255099 156255317 -43374833 - MER82 DNA MER2_type -6 647 428 1697 149 3 65 chr5 156255317 156255638 -43374512 - AluJo SINE Alu -11 301 1 2633 219 37 48 chr5 156255638 156256072 -43374078 - MER82 DNA MER2_type -225 428 2 255 250 0 13 chr5 156256073 156256149 -43374001 + (TA)n Simple_repeat Simple_repeat 2 76 0 514 104 0 104 chr5 156256585 156256681 -43373469 + AluJ/FRAM SINE Alu 223 308 -4 370 161 0 0 chr5 156256682 156256738 -43373412 + MER82 DNA MER2_type 424 479 -174 288 390 45 17 chr5 156256984 156257161 -43372989 - MIR3 SINE MIR -7 201 20 2996 224 63 45 chr5 156257545 156258426 -43371724 + L1ME2 LINE L1 4980 5871 -293 4557 52 0 11 chr5 156258426 156258965 -43371185 + L1PA8 LINE L1 5626 6158 -14 2996 224 63 45 chr5 156258965 156259263 -43370887 + L1ME2 LINE L1 5871 6162 -2 342 243 55 89 chr5 156259296 156259498 -43370652 + L1MC4 LINE L1 7836 8030 -12 309 307 42 32 chr5 156261697 156261800 -43368350 - MIR SINE MIR -63 145 61 3195 111 0 27 chr5 156261800 156262242 -43367908 - MER57B LTR ERV1 -4 430 1 309 307 42 32 chr5 156262242 156262288 -43367862 - MIR SINE MIR -147 61 17 385 265 95 14 chr5 156262519 156262666 -43367484 - L3 LINE CR1 -206 1371 1213 494 312 95 20 chr5 156263056 156263309 -43366841 - MLT1K LTR MaLR -56 532 261 450 319 0 14 chr5 156263371 156263515 -43366635 - MLT1K LTR MaLR -424 164 23 240 35 0 0 chr5 156264231 156264260 -43365890 + (T)n Simple_repeat Simple_repeat 1 29 0 186 265 0 20 chr5 156264287 156264336 -43365814 - L2 LINE L2 -4 3268 3221 1712 101 142 4 chr5 156264871 156265138 -43365012 + AluSx SINE Alu 3 306 -6 509 266 149 19 chr5 156265506 156265720 -43364430 + MIR SINE MIR 14 255 -7 497 347 40 0 chr5 156266065 156266238 -43363912 - MIR SINE MIR -40 222 43 255 152 0 0 chr5 156267209 156267255 -43362895 + (CAT)n Simple_repeat Simple_repeat 2 47 0 699 271 89 14 chr5 156267278 156267492 -43362658 + MIR SINE MIR 12 241 -21 524 268 39 0 chr5 156268218 156268371 -43361779 + MIR SINE MIR 70 228 -34 808 282 124 33 chr5 156268955 156269436 -43360714 + L2 LINE L2 2784 3313 0 291 262 0 87 chr5 156269865 156269968 -43360182 - MIR SINE MIR -70 192 99 288 299 68 22 chr5 156270182 156270321 -43359829 - MIR3 SINE MIR -21 187 41 318 87 0 0 chr5 156270451 156270497 -43359653 + (TA)n Simple_repeat Simple_repeat 2 47 0 2364 89 0 3 chr5 156270571 156270874 -43359276 - AluY SINE Alu -9 302 1 1593 239 43 8 chr5 156270929 156271302 -43358848 + MER58D DNA MER1_type 1 386 0 612 300 50 0 chr5 156271506 156271686 -43358464 + MIR SINE MIR 59 247 -15 373 340 49 7 chr5 156275009 156275153 -43354997 + MIR SINE MIR 16 165 -97 2253 100 0 10 chr5 156275277 156275578 -43354572 + AluSq SINE Alu 1 298 -15 631 166 65 0 chr5 156275617 156275756 -43354394 + L1MD2 LINE L1 6202 6349 -10 195 253 121 24 chr5 156275905 156275988 -43354162 + MIR SINE MIR 169 259 -3 2064 127 0 3 chr5 156276366 156276650 -43353500 + AluSx SINE Alu 1 283 -29 2016 117 28 7 chr5 156276681 156276972 -43353178 + AluSx SINE Alu 3 299 -13 2510 53 20 0 chr5 156276972 156277275 -43352875 + AluY SINE Alu 1 309 -2 415 297 55 21 chr5 156278148 156278293 -43351857 + MIR SINE MIR 1 150 -112 364 278 86 39 chr5 156278811 156279066 -43351084 + L1ME4a LINE L1 5851 6117 -4 4034 176 49 43 chr5 156279493 156280778 -43349372 - L1MB1 LINE L1 -2 6166 4879 23 0 0 0 chr5 156280995 156281018 -43349132 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr5 156281418 156281458 -43348692 + AT_rich Low_complexity Low_complexity 1 40 0 1187 283 152 7 chr5 156281466 156281919 -43348231 - LTR33 LTR ERVL 0 521 3 630 347 97 18 chr5 156281970 156282425 -43347725 - L3 LINE CR1 -519 1058 568 504 152 9 62 chr5 156282427 156282539 -43347611 - MLT1I LTR MaLR 0 409 304 281 336 70 39 chr5 156282782 156282856 -43347294 - MIR SINE MIR -80 182 101 2310 97 0 0 chr5 156282856 156283155 -43346995 + AluY SINE Alu 1 299 -12 281 336 70 39 chr5 156283155 156283208 -43346942 - MIR SINE MIR -161 101 51 704 138 49 0 chr5 156283373 156283496 -43346654 - AluJb SINE Alu -183 129 1 2529 44 3 0 chr5 156283743 156284040 -43346110 - AluY SINE Alu -13 298 1 947 161 0 34 chr5 156284689 156284838 -43345312 + FAM SINE Alu 1 144 -41 312 243 72 63 chr5 156284839 156284950 -43345200 - MLT1K LTR MaLR 0 588 477 298 315 107 20 chr5 156284982 156285131 -43345019 - MLT1K LTR MaLR -218 370 209 1004 123 108 25 chr5 156285429 156285633 -43344517 - AluJo SINE Alu -7 305 85 351 135 250 0 chr5 156285639 156285787 -43344363 - AluSq SINE Alu -61 242 58 289 196 0 0 chr5 156285890 156285936 -43344214 - Alu SINE Alu -253 46 1 1689 230 159 41 chr5 156285936 156285987 -43344163 + L1ME LINE L1 4606 4650 -1516 1785 97 127 0 chr5 156285987 156286254 -43343896 + AluSq SINE Alu 1 301 -2 1689 230 159 41 chr5 156286254 156287154 -43342996 + L1ME LINE L1 4650 5674 -492 1136 191 34 5 chr5 156287380 156287589 -43342561 + MER58A DNA MER1_type 2 216 -8 1863 142 28 0 chr5 156287737 156288025 -43342125 - AluSx SINE Alu -16 296 1 2077 135 0 0 chr5 156288388 156288685 -43341465 - AluSc SINE Alu -12 297 1 378 192 0 0 chr5 156288782 156288855 -43341295 - L1MCb LINE L1 -3970 2594 2522 3763 201 59 55 chr5 156288856 156290128 -43340022 - L1MCb LINE L1 -4883 1162 42 3076 82 17 0 chr5 156290291 156290705 -43339445 + L1PB1 LINE L1 5724 6144 -7 618 96 43 0 chr5 156291579 156291673 -43338477 - L1MC1 LINE L1 0 6333 6236 2604 120 24 7 chr5 156291674 156292083 -43338067 - L1MC1 LINE L1 -179 6154 5739 23 0 0 0 chr5 156293026 156293049 -43337101 + AT_rich Low_complexity Low_complexity 1 23 0 2258 109 6 3 chr5 156293973 156294284 -43335866 + AluSx SINE Alu 1 312 0 2199 110 7 10 chr5 156296185 156296494 -43333656 - AluSx SINE Alu -4 308 1 1633 115 54 70 chr5 156296607 156296938 -43333212 + L1MA4 LINE L1 5970 6295 -5 898 241 88 0 chr5 156299205 156299421 -43330729 + MIR SINE MIR 1 235 -27 8542 184 35 62 chr5 156300168 156302488 -43327662 + L1PA16 LINE L1 3199 5440 -725 3440 156 22 0 chr5 156302490 156303073 -43327077 + L1PA16 LINE L1 5563 6158 -8 184 224 211 0 chr5 156304495 156304571 -43325579 - MIR3 SINE MIR -3 205 114 * 411 224 318 6 chr5 156304569 156304748 -43325402 + MIR SINE MIR 8 242 -20 479 128 0 0 chr5 156304934 156305012 -43325138 - L1MA2 LINE L1 0 6304 6227 7051 147 42 6 chr5 156305164 156306551 -43323599 - L1M1 LINE L1 -744 5402 4003 741 237 123 42 chr5 156307442 156307813 -43322337 - MLT1H LTR MaLR -37 512 37 21 0 0 0 chr5 156307813 156307834 -43322316 + AT_rich Low_complexity Low_complexity 1 21 0 1732 176 0 10 chr5 156309105 156309401 -43320749 - AluJo SINE Alu -19 293 1 335 279 190 0 chr5 156311833 156312012 -43318138 - L1MC4a LINE L1 -1931 5877 5665 2463 51 3 0 chr5 156312862 156313156 -43316994 - AluY SINE Alu -16 295 1 24 0 0 0 chr5 156313429 156313453 -43316697 + AT_rich Low_complexity Low_complexity 1 24 0 635 251 102 70 chr5 156313692 156313743 -43316407 - L1ME3A LINE L1 -219 5951 5903 1345 48 0 0 chr5 156313743 156313910 -43316240 - L1PA6 LINE L1 -1 6153 5987 635 251 102 70 chr5 156313910 156314232 -43315918 - L1ME3A LINE L1 -267 5903 5566 28 0 0 0 chr5 156314333 156314361 -43315789 + AT_rich Low_complexity Low_complexity 1 28 0 187 79 53 0 chr5 156314375 156314413 -43315737 + T-rich Low_complexity Low_complexity 3 42 0 3241 170 127 5 chr5 156314766 156315418 -43314732 + MER44D DNA MER2_type 1 604 -1 298 353 64 5 chr5 156315608 156315792 -43314358 - MIR SINE MIR -27 181 16 557 175 10 0 chr5 156317589 156317686 -43312464 - MER20 DNA MER1_type -4 215 118 10387 219 67 29 chr5 156317686 156318195 -43311955 - L1MB7 LINE L1 -207 6475 5987 2635 123 26 14 chr5 156318195 156318618 -43311532 + MSTC LTR MaLR 1 428 0 10387 219 67 29 chr5 156318618 156318796 -43311354 - L1MB7 LINE L1 -695 5987 5817 288 0 0 0 chr5 156318796 156318828 -43311322 + (TG)n Simple_repeat Simple_repeat 2 33 0 10387 219 67 29 chr5 156318828 156320837 -43309313 - L1MB7 LINE L1 -865 5817 3886 2264 104 0 3 chr5 156320837 156321136 -43309014 - AluSq SINE Alu -15 298 1 10387 219 67 29 chr5 156321136 156322356 -43307794 - L1MB7 LINE L1 -2796 3886 2714 1871 164 7 3 chr5 156322356 156322660 -43307490 + AluJo SINE Alu 1 305 -7 10387 219 67 29 chr5 156322660 156323727 -43306423 - L1MB7 LINE L1 -3968 2714 1203 834 77 0 0 chr5 156323770 156323874 -43306276 - AluY SINE Alu -11 300 197 3882 213 66 42 chr5 156323876 156324701 -43305449 - L1MB7 LINE L1 -5359 1183 321 2270 100 0 3 chr5 156324701 156325001 -43305149 + AluY SINE Alu 1 299 -12 3882 213 66 42 chr5 156325001 156325327 -43304823 - L1MB7 LINE L1 -6221 321 4 459 264 45 112 chr5 156325524 156325766 -43304384 + Tigger8 DNA MER2_type 3 228 -438 320 187 40 0 chr5 156325939 156326014 -43304136 + Tigger8 DNA MER2_type 237 314 -352 28 48 0 0 chr5 156326034 156326076 -43304074 + AT_rich Low_complexity Low_complexity 1 42 0 2150 123 0 3 chr5 156327417 156327727 -43302423 - AluSx SINE Alu -3 309 1 191 139 0 47 chr5 156327968 156328011 -43302139 + L2 LINE L2 3270 3310 -3 2330 78 7 0 chr5 156328447 156328742 -43301408 - AluSp SINE Alu -16 297 1 22 0 0 0 chr5 156331002 156331024 -43299126 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 156331127 156331157 -43298993 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr5 156331859 156331879 -43298271 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 703 189 25 0 chr5 156331880 156332002 -43298148 - FRAM SINE Alu -23 153 29 320 268 189 47 chr5 156332011 156332138 -43298012 + MER5A DNA MER1_type 29 189 0 14462 124 45 10 chr5 156332184 156332416 -43297734 + Tigger1 DNA MER2_type 2 225 -2193 2143 92 10 7 chr5 156332416 156332708 -43297442 - AluSx SINE Alu -6 306 14 14462 124 45 10 chr5 156332708 156334812 -43295338 + Tigger1 DNA MER2_type 225 2418 0 183 184 0 0 chr5 156335212 156335250 -43294900 + (TG)n Simple_repeat Simple_repeat 1 38 0 393 349 8 83 chr5 156335991 156336352 -43293798 - L2 LINE L2 -465 2849 2516 957 388 87 35 chr5 156336368 156337293 -43292857 + L2 LINE L2 1846 2818 -496 587 290 60 85 chr5 156337335 156337701 -43292449 + L2 LINE L2 2915 3271 -1 2435 232 16 2 chr5 156338558 156339049 -43291101 + MER82 DNA MER2_type 155 652 -1 183 42 0 0 chr5 156340036 156340060 -43290090 + (TG)n Simple_repeat Simple_repeat 2 25 0 550 265 88 34 chr5 156341332 156341393 -43288757 + MIR SINE MIR 4 60 -202 4535 148 40 45 chr5 156341393 156341878 -43288272 - MER6 DNA MER2_type 0 865 379 2096 122 3 0 chr5 156341878 156342165 -43287985 + AluSx SINE Alu 1 288 -24 4535 148 40 45 chr5 156342165 156342477 -43287673 - MER6 DNA MER2_type -486 379 70 2213 82 0 60 chr5 156342477 156342796 -43287354 - AluSx SINE Alu -10 302 3 4535 148 40 45 chr5 156342796 156342866 -43287284 - MER6 DNA MER2_type -795 70 1 550 265 88 34 chr5 156342866 156343008 -43287142 + MIR SINE MIR 60 218 -44 21 89 0 0 chr5 156343389 156343445 -43286705 + AT_rich Low_complexity Low_complexity 1 56 0 616 281 0 41 chr5 156343734 156343905 -43286245 + MIR SINE MIR 5 168 -94 213 347 8 41 chr5 156344074 156344195 -43285955 - MIR SINE MIR -69 139 23 211 304 54 62 chr5 156344601 156344713 -43285437 + L2 LINE L2 3180 3290 -23 475 261 79 54 chr5 156344940 156345143 -43285007 + MIR SINE MIR 31 238 -24 1143 63 0 32 chr5 156346403 156346561 -43283589 + L1PA14 LINE L1 5999 6151 -10 2455 76 0 0 chr5 156346608 156346911 -43283239 + AluSg SINE Alu 1 303 -7 767 195 77 122 chr5 156346964 156347406 -43282744 - L1M4 LINE L1 -1466 4916 4495 451 228 58 29 chr5 156347395 156347566 -43282584 - L1M4 LINE L1 -5053 1331 1156 * 272 264 55 33 chr5 156347570 156347661 -43282489 - HAL1 LINE L1 -1939 568 476 953 229 159 11 chr5 156347710 156348081 -43282069 + HAL1 LINE L1 862 1287 -1220 6092 148 72 11 chr5 156348193 156349351 -43280799 - Tigger3b DNA MER2_type 0 1231 3 248 285 0 106 chr5 156349396 156349519 -43280631 - L1ME3A LINE L1 -94 6076 5967 1082 242 133 45 chr5 156349624 156350224 -43279926 - L1ME3A LINE L1 -230 5940 5288 198 167 0 0 chr5 156350369 156350405 -43279745 + (TATG)n Simple_repeat Simple_repeat 3 38 0 1689 139 24 44 chr5 156350405 156350699 -43279451 - AluSx SINE Alu -24 288 1 24 0 0 0 chr5 156350702 156350726 -43279424 + AT_rich Low_complexity Low_complexity 1 24 0 830 233 220 10 chr5 156350804 156351104 -43279046 - HAL1 LINE L1 -2141 366 4 355 259 216 0 chr5 156351466 156351628 -43278522 + L1ME LINE L1 5570 5766 -355 2411 78 7 0 chr5 156352994 156353289 -43276861 - AluSp SINE Alu -16 297 1 2243 89 0 0 chr5 156353588 156353901 -43276249 - AluSc SINE Alu 0 313 1 1148 66 88 33 chr5 156354812 156354993 -43275157 - L1PA10 LINE L1 0 6168 5978 4939 111 11 4 chr5 156355438 156356161 -43273989 - L1PA15 LINE L1 0 6165 5438 2097 170 13 3 chr5 156356161 156356549 -43273601 - L1PA15 LINE L1 -1229 4917 4526 288 293 32 73 chr5 156357848 156357971 -43272179 + MIR SINE MIR 47 164 -98 1708 156 75 31 chr5 156357979 156358338 -43271812 + THE1C LTR MaLR 1 375 0 8968 124 30 64 chr5 156358341 156359974 -43270176 + THE1C-int LTR MaLR 4 1580 0 1824 133 69 28 chr5 156359974 156360334 -43269816 + THE1C LTR MaLR 1 375 0 254 258 133 67 chr5 156361187 156361307 -43268843 + MIR SINE MIR 16 143 -119 2733 161 56 37 chr5 156361587 156361898 -43268252 - MER44D DNA MER2_type -1883 604 300 2597 99 0 0 chr5 156361898 156362253 -43267897 + THE1A LTR MaLR 1 355 0 10992 92 26 20 chr5 156362253 156363824 -43266326 + THE1A-int LTR MaLR 1 1580 0 2664 74 3 28 chr5 156363824 156364188 -43265962 + THE1A LTR MaLR 1 355 0 2733 161 56 37 chr5 156364188 156364413 -43265737 - MER44D DNA MER2_type -2186 301 1 683 254 60 32 chr5 156365083 156365300 -43264850 + MIR SINE MIR 15 237 -25 201 263 35 0 chr5 156366819 156366876 -43263274 - MIR3 SINE MIR -39 169 111 1217 164 28 5 chr5 156367619 156367833 -43262317 - MER20 DNA MER1_type 0 219 1 238 339 126 8 chr5 156368144 156368271 -43261879 - MIR SINE MIR -102 160 19 624 239 132 0 chr5 156368284 156368443 -43261707 + Charlie1a DNA MER1_type 1 180 -1275 2849 169 143 15 chr5 156368471 156369140 -43261010 + Charlie1a DNA MER1_type 266 1020 -435 271 316 161 18 chr5 156369288 156369456 -43260694 - MIR SINE MIR -51 211 20 429 265 93 21 chr5 156370609 156370841 -43259309 - MIR SINE MIR -10 252 2 355 219 48 0 chr5 156372238 156372343 -43257807 + L1MC4 LINE L1 7933 8042 0 548 233 48 7 chr5 156372774 156372920 -43257230 + L1ME1 LINE L1 6010 6161 -5 342 293 160 28 chr5 156373850 156374031 -43256119 - L2 LINE L2 -41 3231 3027 368 106 212 15 chr5 156374646 156374712 -43255438 + Tigger5 DNA MER2_type 1 79 -2244 419 131 0 0 chr5 156374714 156374775 -43255375 - Tigger5 DNA MER2_type -5 2318 2258 865 228 5 47 chr5 156375001 156375216 -43254934 - MLT1F LTR MaLR -336 206 1 521 225 178 5 chr5 156375217 156375430 -43254720 + MER113 DNA MER1_type? 154 403 -118 1333 163 96 39 chr5 156375458 156375740 -43254410 + AluJo SINE Alu 1 298 -14 228 179 191 60 chr5 156375803 156375887 -43254263 - MIR3 SINE MIR -50 158 74 2142 95 16 30 chr5 156376433 156376738 -43253412 + AluSg SINE Alu 1 301 -9 588 264 79 0 chr5 156376771 156376949 -43253201 + L1ME3A LINE L1 5968 6159 -11 272 133 0 0 chr5 156377815 156377860 -43252290 + AluSc SINE Alu 1 45 -256 * 1111 118 0 4 chr5 156377848 156378034 -43252116 - ALR/Alpha Satellite centromeric 0 185 1 2123 98 4 0 chr5 156378046 156378320 -43251830 + AluSc SINE Alu 29 303 -6 281 308 138 8 chr5 156378643 156378773 -43251377 - L2 LINE L2 -160 3112 2966 203 300 0 0 chr5 156378814 156378864 -43251286 - L2 LINE L2 -673 2641 2592 1403 155 52 65 chr5 156378920 156379211 -43250939 - AluJo SINE Alu -25 287 1 2649 49 0 0 chr5 156380194 156380498 -43249652 + AluY SINE Alu 1 304 -7 3717 154 22 0 chr5 156381475 156382058 -43248092 - L1PA16 LINE L1 -8 6158 5563 8789 184 35 62 chr5 156382060 156384383 -43245767 - L1PA16 LINE L1 -725 5440 3196 887 241 88 0 chr5 156385127 156385343 -43244807 - MIR SINE MIR -27 235 1 23 0 0 0 chr5 156385842 156385865 -43244285 + AT_rich Low_complexity Low_complexity 1 23 0 195 273 104 0 chr5 156387653 156387730 -43242420 - L2 LINE L2 -21 3292 3208 283 310 43 17 chr5 156387837 156387953 -43242197 - L2 LINE L2 -237 3035 2917 405 260 7 78 chr5 156388000 156388154 -43241996 - MIR SINE MIR -60 202 60 1886 151 0 4 chr5 156388225 156388504 -43241646 + AluJo SINE Alu 1 278 -34 1632 32 0 5 chr5 156388504 156388690 -43241460 + L1PA4 LINE L1 5971 6155 0 299 355 8 0 chr5 156390996 156391117 -43239033 + (ATGGTG)n Simple_repeat Simple_repeat 1 122 0 448 232 36 0 chr5 156391120 156391232 -43238918 - MIR SINE MIR -10 252 137 235 257 140 0 chr5 156391238 156391374 -43238776 - L1M4 LINE L1 -812 5334 5180 1023 283 137 13 chr5 156391705 156392233 -43237917 + L2 LINE L2 2529 3126 -187 1493 108 56 6 chr5 156392233 156392661 -43237489 - LTR54 LTR ERV1 0 510 1 232 269 17 76 chr5 156392661 156392780 -43237370 + L2 LINE L2 3125 3236 -77 758 220 7 0 chr5 156392814 156392966 -43237184 + MLT1F LTR MaLR 1 162 -399 1701 179 13 20 chr5 156393306 156393608 -43236542 + AluJo SINE Alu 1 300 -12 210 37 0 0 chr5 156393701 156393728 -43236422 + (CA)n Simple_repeat Simple_repeat 2 28 0 1066 228 128 68 chr5 156394075 156394519 -43235631 - MLT1H LTR MaLR 0 549 79 446 315 128 9 chr5 156395476 156395695 -43234455 - MIR SINE MIR 0 262 18 22 0 0 0 chr5 156397710 156397732 -43232418 + AT_rich Low_complexity Low_complexity 1 22 0 373 231 43 19 chr5 156399117 156399248 -43230902 - MIR SINE MIR -67 141 14 588 249 117 28 chr5 156399274 156399487 -43230663 + MIR SINE MIR 13 244 -18 609 304 84 14 chr5 156399526 156399740 -43230410 - MIR SINE MIR -24 238 10 327 245 58 26 chr5 156402197 156402352 -43227798 + L1ME4a LINE L1 5761 5920 -201 212 324 28 0 chr5 156402366 156402437 -43227713 + MIR SINE MIR 176 248 -14 211 352 136 0 chr5 156402467 156402555 -43227595 + L2 LINE L2 3173 3272 0 344 325 65 7 chr5 156402648 156402802 -43227348 + MIR SINE MIR 99 261 -1 426 244 46 15 chr5 156402958 156403089 -43227061 + L1ME4a LINE L1 5964 6098 -23 234 274 163 33 chr5 156403403 156403556 -43226594 + L3b LINE CR1 1290 1462 -121 287 272 107 0 chr5 156404240 156404343 -43225807 + L2 LINE L2 3186 3299 -14 437 238 57 0 chr5 156404517 156404639 -43225511 + MIR SINE MIR 117 245 -17 650 261 124 9 chr5 156404870 156405096 -43225054 + MIR SINE MIR 3 254 -8 443 245 74 15 chr5 156405355 156405550 -43224600 - L1MC/D LINE L1 -374 5747 5590 379 250 0 28 chr5 156406686 156406794 -43223356 + MER113 DNA MER1_type? 1 105 -416 189 0 0 0 chr5 156407887 156407908 -43222242 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 211 316 165 25 chr5 156408521 156408679 -43221471 - MIR SINE MIR -68 194 15 25 31 0 0 chr5 156408932 156408964 -43221186 + AT_rich Low_complexity Low_complexity 1 32 0 568 188 113 41 chr5 156408990 156409160 -43220990 - MIR SINE MIR -62 146 16 656 244 19 13 chr5 156409766 156409943 -43220207 - MER5A DNA MER1_type 0 189 1 844 293 24 12 chr5 156410031 156410284 -43219866 + MIR SINE MIR 7 262 0 198 103 0 0 chr5 156410475 156410504 -43219646 + (TGGGGG)n Simple_repeat Simple_repeat 5 33 0 2293 82 7 16 chr5 156411871 156412176 -43217974 - AluSg SINE Alu -8 302 1 25 0 0 0 chr5 156414000 156414025 -43216125 + AT_rich Low_complexity Low_complexity 1 25 0 1606 192 3 22 chr5 156414127 156414444 -43215706 - AluJo SINE Alu -1 311 1 314 304 62 50 chr5 156416088 156416249 -43213901 - MIR SINE MIR -64 198 36 5819 172 22 20 chr5 156420433 156421410 -43208740 + L1MC2 LINE L1 4915 5900 -444 2080 116 7 7 chr5 156421410 156421704 -43208446 + AluSx SINE Alu 1 294 -18 5819 172 22 20 chr5 156421704 156422140 -43208010 + L1MC2 LINE L1 5900 6333 -11 276 254 0 0 chr5 156422151 156422206 -43207944 + Charlie8 DNA MER1_type 118 172 -2245 813 183 102 57 chr5 156422297 156422560 -43207590 + MLT1H LTR MaLR 3 317 -232 188 333 15 15 chr5 156422981 156423047 -43207103 + MIR SINE MIR 30 95 -113 550 291 33 62 chr5 156423812 156424053 -43206097 - L2 LINE L2 -3 3310 3077 395 200 44 0 chr5 156424054 156424144 -43206006 + MIR SINE MIR 94 187 -75 1076 203 0 5 chr5 156426159 156426346 -43203804 + MER5A DNA MER1_type 1 186 -3 2129 147 0 3 chr5 156426902 156427214 -43202936 - AluSx SINE Alu -1 311 1 449 264 67 43 chr5 156427608 156427816 -43202334 + MIR SINE MIR 44 256 -6 22 35 0 0 chr5 156428023 156428052 -43202098 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 0 0 chr5 156428611 156428632 -43201518 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 631 296 188 12 chr5 156428661 156429093 -43201057 - LTR33 LTR ERVL -8 513 6 265 303 91 12 chr5 156429093 156429258 -43200892 + L1MC4a LINE L1 5724 5901 -1907 580 331 0 28 chr5 156429264 156429442 -43200708 - MER5B DNA MER1_type -2 176 4 2488 86 0 0 chr5 156429791 156430095 -43200055 - AluY SINE Alu -7 304 1 1812 145 36 13 chr5 156430212 156430515 -43199635 - AluJo SINE Alu -2 310 1 2224 124 0 7 chr5 156430741 156431048 -43199102 - AluSx SINE Alu -7 305 1 327 49 0 0 chr5 156432011 156432052 -43198098 + (CA)n Simple_repeat Simple_repeat 2 42 0 1523 192 69 0 chr5 156432592 156432868 -43197282 + AluJb SINE Alu 5 299 -13 2230 100 0 0 chr5 156433169 156433487 -43196663 - AluSx SINE Alu 0 318 1 205 269 103 39 chr5 156435204 156435282 -43194868 + MIR SINE MIR 2 84 -178 1218 220 25 18 chr5 156435296 156435573 -43194577 - L1PA16 LINE L1 -4 6162 5884 559 228 24 0 chr5 156435602 156435725 -43194425 + MIR SINE MIR 127 252 -10 2000 129 0 49 chr5 156436923 156437249 -43192901 + AluSx SINE Alu 3 312 0 211 330 40 20 chr5 156437779 156437879 -43192271 - L2 LINE L2 -206 3066 2965 279 0 0 0 chr5 156438182 156438213 -43191937 + (T)n Simple_repeat Simple_repeat 1 31 0 238 288 0 14 chr5 156438987 156439060 -43191090 - LTR67 LTR ERVL -2 555 484 * 1275 287 46 34 chr5 156439000 156439499 -43190651 - MLT1K LTR MaLR -17 571 67 519 254 193 11 chr5 156440345 156440526 -43189624 - MIR SINE MIR -41 221 8 546 266 121 25 chr5 156440864 156441063 -43189087 - MIR SINE MIR -10 252 35 532 143 0 12 chr5 156442988 156443072 -43187078 - AluJ/FLAM SINE Alu -229 83 1 371 224 77 26 chr5 156443276 156443428 -43186722 - MIR SINE MIR -37 225 66 481 286 21 26 chr5 156443911 156444100 -43186050 + L1MC4a LINE L1 5719 5906 -1902 2175 99 0 0 chr5 156445568 156445881 -43184269 + AluSx SINE Alu 1 313 0 196 360 54 18 chr5 156447470 156447581 -43182569 + L2 LINE L2 3102 3216 -56 256 258 18 132 chr5 156447627 156447724 -43182426 - MIR SINE MIR -95 167 95 2406 115 0 0 chr5 156447724 156448036 -43182114 - AluSx SINE Alu 0 312 1 256 258 18 132 chr5 156448036 156448105 -43182045 - MIR SINE MIR -167 95 20 212 242 76 61 chr5 156448192 156448324 -43181826 + L2 LINE L2 2943 3076 -196 466 284 103 21 chr5 156448395 156448589 -43181561 - MIR SINE MIR -19 243 34 2177 106 14 0 chr5 156448612 156448905 -43181245 - AluSx SINE Alu -15 297 1 327 288 102 0 chr5 156448957 156449075 -43181075 + L2 LINE L2 3141 3270 -2 304 325 229 19 chr5 156449578 156449853 -43180297 + L2 LINE L2 1854 2070 -1244 2298 94 0 3 chr5 156449853 156450150 -43180000 - AluSc SINE Alu -3 306 11 304 325 229 19 chr5 156450150 156450217 -43179933 + L2 LINE L2 2070 2122 -1192 2051 142 96 6 chr5 156450217 156450561 -43179589 - THE1C LTR MaLR 0 375 1 304 325 229 19 chr5 156450561 156450965 -43179185 + L2 LINE L2 2122 2758 -556 222 292 62 52 chr5 156451301 156451397 -43178753 + L2 LINE L2 3176 3272 0 330 349 58 33 chr5 156451574 156451815 -43178335 + L2 LINE L2 2729 2975 -339 433 312 51 32 chr5 156452106 156452263 -43177887 + L2 LINE L2 3109 3268 -4 231 36 0 0 chr5 156452810 156452838 -43177312 + (A)n Simple_repeat Simple_repeat 1 28 0 326 263 75 38 chr5 156453041 156453174 -43176976 + MIR SINE MIR 123 260 -2 756 298 119 20 chr5 156454590 156455127 -43175023 + L1ME4a LINE L1 5530 6119 -2 332 309 57 0 chr5 156455417 156455540 -43174610 - MIR SINE MIR -20 242 113 962 216 62 25 chr5 156456758 156456999 -43173151 - MIR SINE MIR -1 261 12 202 247 0 135 chr5 156458016 156458105 -43172045 + MER5B DNA MER1_type 1 77 -101 354 271 52 62 chr5 156459088 156459280 -43170870 + L2 LINE L2 3002 3191 -122 278 208 40 88 chr5 156459343 156459468 -43170682 - Charlie7 DNA MER1_type -52 2560 2442 515 279 0 0 chr5 156459540 156459669 -43170481 + L2 LINE L2 3181 3309 -4 459 227 9 15 chr5 156460174 156460306 -43169844 + L1ME4a LINE L1 1529 1912 -4304 * 1167 193 43 0 chr5 156460304 156460558 -43169592 + L1ME4a LINE L1 5102 5366 -849 * 1378 240 58 15 chr5 156460550 156460946 -43169204 + L1MB7 LINE L1 5770 6182 -2 364 184 72 56 chr5 156461309 156461434 -43168716 - MER113 DNA MER1_type? -386 135 9 222 354 95 25 chr5 156461943 156462101 -43168049 - L2 LINE L2 -187 3085 2917 613 189 54 23 chr5 156462144 156462344 -43167806 + MER58 DNA MER1_type 1 2415 -5 227 335 114 24 chr5 156462428 156462595 -43167555 - MLT1K LTR MaLR -35 553 372 2439 214 100 57 chr5 156462684 156462972 -43167178 + MER44D DNA MER2_type 1 275 -2212 2346 98 0 9 chr5 156462972 156463287 -43166863 - AluSx SINE Alu 0 312 1 2439 214 100 57 chr5 156463287 156463700 -43166450 + MER44D DNA MER2_type 275 604 -1 240 281 22 45 chr5 156464110 156464199 -43165951 - L2 LINE L2 -537 2777 2691 568 141 50 10 chr5 156465631 156465730 -43164420 + L1MC1 LINE L1 6230 6332 -1 1379 264 89 35 chr5 156465965 156466068 -43164082 - L1ME3A LINE L1 -138 6024 5928 3750 189 25 3 chr5 156466068 156466707 -43163443 + MER82 DNA MER2_type 1 653 0 1379 264 89 35 chr5 156466707 156467344 -43162806 - L1ME3A LINE L1 -234 5928 5255 633 168 58 26 chr5 156467471 156467626 -43162524 - L1ME3A LINE L1 -1099 5047 4888 925 83 42 0 chr5 156468553 156468673 -43161477 - L1PA16 LINE L1 -9 6157 6033 1130 283 52 14 chr5 156469908 156470329 -43159821 + L1ME4a LINE L1 5548 5984 -206 407 232 78 21 chr5 156470334 156470476 -43159674 + L1ME4a LINE L1 6035 6184 -6 2338 92 18 59 chr5 156471638 156472029 -43158121 - L1P LINE L1 -3479 2667 2293 7861 36 9 1 chr5 156472032 156473815 -43156335 + L1PA7 LINE L1 4372 6154 0 2236 112 0 3 chr5 156473977 156474273 -43155877 + AluSq SINE Alu 1 295 -18 414 313 68 6 chr5 156475382 156475545 -43154605 + MIR SINE MIR 20 192 -70 383 261 59 34 chr5 156475549 156475668 -43154482 - L2 LINE L2 0 3313 3192 2054 128 0 0 chr5 156479235 156479531 -43150619 + AluSx SINE Alu 1 296 -16 2146 112 50 31 chr5 156479836 156480193 -43149957 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr5 156480733 156480755 -43149395 + AT_rich Low_complexity Low_complexity 1 22 0 991 118 20 51 chr5 156480916 156481111 -43149039 + MER53 DNA DNA 1 189 0 1338 151 89 11 chr5 156481315 156481586 -43148564 - AluJo SINE Alu -15 297 6 466 208 0 0 chr5 156482449 156482526 -43147624 + MER58 DNA MER1_type 2344 2420 0 583 264 31 12 chr5 156482534 156482600 -43147550 + MER5B DNA MER1_type 1 64 -114 2417 54 0 0 chr5 156482600 156482897 -43147253 + AluY SINE Alu 1 297 -14 583 264 31 12 chr5 156482897 156482993 -43147157 + MER5B DNA MER1_type 64 166 -12 25 0 0 0 chr5 156484185 156484210 -43145940 + AT_rich Low_complexity Low_complexity 1 25 0 3069 154 52 20 chr5 156485186 156485796 -43144354 - L1MB8 LINE L1 0 6178 5549 461 313 215 0 chr5 156485947 156486235 -43143915 + L2 LINE L2 2560 2909 -405 265 217 0 0 chr5 156486236 156486282 -43143868 + MER58A DNA MER1_type 5 50 -174 207 184 0 0 chr5 156486849 156486887 -43143263 + (TG)n Simple_repeat Simple_repeat 2 39 0 724 272 135 19 chr5 156487446 156487758 -43142392 + L2 LINE L2 2554 2901 -413 678 200 67 30 chr5 156487766 156487901 -43142249 + MER58A DNA MER1_type 5 144 0 408 270 30 0 chr5 156488080 156488180 -43141970 + L2 LINE L2 3170 3272 0 186 329 73 12 chr5 156488508 156488590 -43141560 - L2 LINE L2 -3 3269 3183 * 637 277 28 51 chr5 156488563 156488816 -43141334 + MIR SINE MIR 6 252 -10 614 259 98 0 chr5 156488883 156489057 -43141093 + MIR SINE MIR 28 218 -44 418 328 0 0 chr5 156489478 156489603 -43140547 - MER5A DNA MER1_type -41 148 24 345 354 7 14 chr5 156490103 156490247 -43139903 - MIR SINE MIR -2 260 118 180 0 0 0 chr5 156491161 156491181 -43138969 + (A)n Simple_repeat Simple_repeat 1 20 0 1713 147 0 31 chr5 156491266 156491559 -43138591 - AluJb SINE Alu -28 284 1 291 85 0 0 chr5 156491652 156491699 -43138451 + (GGAA)n Simple_repeat Simple_repeat 1 47 0 383 38 19 0 chr5 156491980 156492033 -43138117 + (CA)n Simple_repeat Simple_repeat 1 54 0 2051 135 0 3 chr5 156494913 156495225 -43134925 - AluSx SINE Alu -1 311 1 2451 65 0 0 chr5 156495936 156496246 -43133904 + AluY SINE Alu 1 310 -1 309 314 113 16 chr5 156500871 156500995 -43129155 + L2 LINE L2 3112 3247 -25 586 300 86 18 chr5 156501374 156501594 -43128556 - L3b LINE CR1 -63 1520 1286 266 320 118 76 chr5 156501632 156502038 -43128112 - L2 LINE L2 -5 3267 2845 328 283 246 5 chr5 156502171 156502362 -43127788 - MIR SINE MIR 0 262 26 1764 134 4 0 chr5 156502367 156502541 -43127609 - AluSx SINE Alu -14 298 121 243 0 0 0 chr5 156502541 156502568 -43127582 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1764 134 4 0 chr5 156502568 156502662 -43127488 - AluSx SINE Alu -191 121 29 2412 72 0 0 chr5 156503196 156503503 -43126647 + AluY SINE Alu 1 307 -4 795 294 52 0 chr5 156503896 156504127 -43126023 - MIR SINE MIR -12 250 8 671 261 13 52 chr5 156504225 156504455 -43125695 + MLT1K LTR MaLR 10 230 -358 1642 181 10 7 chr5 156504792 156505102 -43125048 + AluJb SINE Alu 1 311 -1 2059 96 43 20 chr5 156505691 156505992 -43124158 - AluSg SINE Alu -2 308 1 222 277 0 0 chr5 156506170 156506217 -43123933 + polypurine Low_complexity Low_complexity 1 47 0 770 287 175 29 chr5 156506482 156506967 -43123183 + MLT1K LTR MaLR 10 565 -23 332 287 82 0 chr5 156507080 156507202 -43122948 + MIR SINE MIR 81 212 -50 628 178 0 0 chr5 156507473 156507580 -43122570 + MSTA LTR MaLR 1 107 -321 1977 139 84 12 chr5 156507624 156507968 -43122182 + MSTA LTR MaLR 60 428 0 2401 93 8 93 chr5 156508383 156508781 -43121369 - THE1B LTR MaLR 0 364 1 429 180 200 10 chr5 156509500 156509565 -43120585 - MER63 DNA MER1_type -91 745 694 264 100 0 0 chr5 156509565 156509605 -43120545 + (CCCCCA)n Simple_repeat Simple_repeat 3 42 0 429 180 200 10 chr5 156509605 156509639 -43120511 - MER63 DNA MER1_type -142 694 1 189 0 0 0 chr5 156510324 156510345 -43119805 + (TG)n Simple_repeat Simple_repeat 1 21 0 2101 116 0 10 chr5 156511107 156511418 -43118732 + AluSx SINE Alu 2 309 -3 245 154 0 0 chr5 156511475 156511514 -43118636 + MIR SINE MIR 158 196 -66 3108 195 148 19 chr5 156511665 156512547 -43117603 + L1MC4 LINE L1 7041 8036 -6 626 286 10 36 chr5 156513082 156513274 -43116876 + MIR SINE MIR 14 200 -62 304 307 211 34 chr5 156513876 156514231 -43115919 + L2 LINE L2 2242 2659 -655 372 318 136 71 chr5 156514371 156514739 -43115411 + L2 LINE L2 2820 3211 -61 2586 117 0 14 chr5 156514817 156515186 -43114964 + THE1B LTR MaLR 1 364 0 234 271 46 53 chr5 156516170 156516321 -43113829 - MER117 DNA MER1_type -36 161 12 2134 126 0 0 chr5 156516564 156516873 -43113277 - AluSx SINE Alu -3 309 1 378 0 0 0 chr5 156516981 156517023 -43113127 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 877 150 13 0 chr5 156517030 156517261 -43112889 + (TGGA)n Simple_repeat Simple_repeat 1 234 0 774 166 17 0 chr5 156517289 156517464 -43112686 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 383 229 8 0 chr5 156517485 156517603 -43112547 + (TGGA)n Simple_repeat Simple_repeat 3 121 0 2386 161 61 9 chr5 156517607 156518048 -43112102 - MLT1C LTR MaLR 0 467 4 584 291 69 42 chr5 156518075 156518408 -43111742 - L1MC4a LINE L1 -1879 5929 5588 239 279 25 25 chr5 156519190 156519269 -43110881 - MIR SINE MIR -135 127 49 443 329 7 15 chr5 156519293 156519430 -43110720 - L2 LINE L2 -4 3268 3133 459 257 119 0 chr5 156520263 156520415 -43109735 - MIR SINE MIR -62 146 25 233 343 14 0 chr5 156521191 156521261 -43108889 + MIR3 SINE MIR 88 158 -50 606 215 82 32 chr5 156521353 156521511 -43108639 + MER97a DNA MER1_type? 14 179 -715 1033 249 176 6 chr5 156521583 156521929 -43108221 - MLT1K LTR MaLR -13 575 171 302 98 20 0 chr5 156522486 156522537 -43107613 + (TA)n Simple_repeat Simple_repeat 1 52 0 942 181 35 15 chr5 156522544 156522743 -43107407 - L1ME3A LINE L1 -60 6110 5908 1576 142 64 0 chr5 156522777 156523089 -43107061 - AluSx SINE Alu 0 329 1 21 0 0 0 chr5 156523126 156523147 -43107003 + AT_rich Low_complexity Low_complexity 1 21 0 986 116 6 55 chr5 156523147 156523311 -43106839 - LTR9 LTR ERV1 -85 527 372 2866 143 23 19 chr5 156523311 156523758 -43106392 - HUERS-P3 LTR ERV1 -6476 520 100 2077 109 0 40 chr5 156523758 156524080 -43106070 + AluSg SINE Alu 2 310 0 2866 143 23 19 chr5 156524080 156524167 -43105983 - HUERS-P3 LTR ERV1 -6896 100 15 1212 73 6 56 chr5 156524182 156524361 -43105789 - LTR9 LTR ERV1 0 612 443 1002 96 83 0 chr5 156524369 156524563 -43105587 - AluSc SINE Alu 0 344 138 1137 209 23 30 chr5 156524566 156524829 -43105321 - MLT2C1 LTR ERVL -136 261 1 383 288 62 62 chr5 156524830 156525087 -43105063 - L1M4 LINE L1 -1221 4925 4669 1907 158 3 0 chr5 156525424 156525721 -43104429 + AluSx SINE Alu 1 298 -14 237 264 0 0 chr5 156526432 156526485 -43103665 - L1ME4a LINE L1 -95 6026 5974 318 106 0 0 chr5 156526492 156526539 -43103611 + (TG)n Simple_repeat Simple_repeat 1 47 0 887 240 73 12 chr5 156526542 156526788 -43103362 + MIR SINE MIR 1 261 -1 255 170 0 0 chr5 156526833 156526880 -43103270 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 1921 217 53 37 chr5 156526932 156527443 -43102707 - L1ME1 LINE L1 -4 6162 5644 606 263 140 5 chr5 156527745 156527931 -43102219 - MIR SINE MIR -3 259 49 221 81 0 27 chr5 156527948 156527985 -43102165 + (CCCCCT)n Simple_repeat Simple_repeat 6 41 0 * 775 76 0 17 chr5 156527983 156528101 -43102049 + (TTTC)n Simple_repeat Simple_repeat 3 118 0 1692 159 10 10 chr5 156528109 156528410 -43101740 - AluJb SINE Alu -11 301 1 188 208 75 75 chr5 156528668 156528721 -43101429 - L2 LINE L2 -1 3271 3219 287 252 43 52 chr5 156528767 156528882 -43101268 + MLT1L LTR MaLR 153 266 -349 232 182 0 73 chr5 156529038 156529093 -43101057 + MLT1K LTR MaLR 517 567 -21 404 304 6 63 chr5 156529428 156529586 -43100564 - MIR SINE MIR -43 219 71 2586 149 42 18 chr5 156529782 156530284 -43099866 - L1MA9 LINE L1 -5 6307 5794 288 77 0 0 chr5 156530284 156530323 -43099827 + (TG)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr5 156530354 156530374 -43099776 + (TG)n Simple_repeat Simple_repeat 1 20 0 282 171 13 40 chr5 156530377 156530453 -43099697 + L1M2 LINE L1 5755 5828 -472 324 0 0 0 chr5 156530453 156530489 -43099661 + (CA)n Simple_repeat Simple_repeat 2 37 0 1396 141 0 5 chr5 156530493 156530713 -43099437 - L1MA9 LINE L1 -537 5775 5557 2428 163 14 2 chr5 156531684 156532107 -43098043 - L1MB7 LINE L1 -46 6138 5711 549 153 0 12 chr5 156532107 156532192 -43097958 - Tigger7 DNA MER2_type 0 2487 2404 * 1334 173 108 8 chr5 156532191 156532440 -43097710 - Tigger7 DNA MER2_type -459 274 1 1295 167 53 0 chr5 156532441 156532687 -43097463 - L1MB7 LINE L1 -473 5711 5453 22 0 0 0 chr5 156532961 156532983 -43097167 + AT_rich Low_complexity Low_complexity 1 22 0 263 302 58 22 chr5 156533274 156533413 -43096737 - MIR SINE MIR -50 212 69 1809 123 26 19 chr5 156533461 156533802 -43096348 - MER4A LTR ERV1 0 664 263 648 111 0 10 chr5 156533802 156533901 -43096249 - MER4A LTR ERV1 -566 98 1 1713 142 80 0 chr5 156534127 156534402 -43095748 + AluJb SINE Alu 1 297 -15 380 357 61 25 chr5 156534714 156534994 -43095156 - L2 LINE L2 -455 2859 2570 251 208 48 80 chr5 156535251 156535266 -43094884 - L1MA10 LINE L1 -2 6332 6318 3832 201 36 32 chr5 156535266 156536552 -43093598 - L1ME1 LINE L1 -5 6161 4873 * 9265 198 39 20 chr5 156536550 156539876 -43090274 - L1MC1 LINE L1 0 6333 2932 1829 168 3 0 chr5 156539876 156540173 -43089977 - AluJb SINE Alu -14 298 1 9265 198 39 20 chr5 156540173 156540427 -43089723 - L1MC1 LINE L1 -3401 2932 2684 3275 222 71 60 chr5 156540425 156540761 -43089389 - L1ME1 LINE L1 -1263 4883 4552 * 1277 165 35 9 chr5 156540761 156540991 -43089159 + MER46A DNA MER2_type 1 236 0 3275 222 71 60 chr5 156540991 156541210 -43088940 - L1ME1 LINE L1 -1594 4552 4337 1108 215 23 0 chr5 156541210 156541429 -43088721 - MER58A DNA MER1_type 0 224 1 3275 222 71 60 chr5 156541429 156541493 -43088657 - L1ME1 LINE L1 -1809 4337 4275 2914 166 21 19 chr5 156541493 156542060 -43088090 - L1MB5 LINE L1 -8 6166 5596 1535 211 7 23 chr5 156542060 156542364 -43087786 - AluJo SINE Alu -13 299 1 3275 222 71 60 chr5 156542373 156543044 -43087106 - L1ME1 LINE L1 -1871 4275 3577 293 309 32 9 chr5 156543225 156543393 -43086757 - MIR SINE MIR 0 262 36 1842 190 151 23 chr5 156543773 156544092 -43086058 - L1MB8 LINE L1 -1 6177 5900 2010 126 0 57 chr5 156544092 156544271 -43085879 - AluSx SINE Alu -13 299 144 2235 75 21 0 chr5 156544271 156544553 -43085597 - AluSp SINE Alu -25 288 1 2010 126 0 57 chr5 156544553 156544690 -43085460 - AluSx SINE Alu -168 144 1 1842 190 151 23 chr5 156544690 156544892 -43085258 - L1MB8 LINE L1 -278 5900 5589 216 0 0 0 chr5 156545562 156545586 -43084564 + (A)n Simple_repeat Simple_repeat 1 24 0 1347 110 245 4 chr5 156545903 156546176 -43083974 + MER44D DNA MER2_type 1 609 0 553 229 49 66 chr5 156546346 156546529 -43083621 + MIR SINE MIR 77 256 -6 200 369 71 24 chr5 156546946 156547030 -43083120 + L2 LINE L2 3162 3249 -23 1081 157 0 22 chr5 156552500 156552678 -43077472 - AluJo/FRAM SINE Alu 0 312 139 1479 142 56 0 chr5 156552678 156552910 -43077240 - AluJo SINE Alu -67 245 1 237 264 154 109 chr5 156553062 156553172 -43076978 + MIR SINE MIR 86 200 -62 287 197 197 33 chr5 156553612 156553734 -43076416 + MER103 DNA DNA 8 149 -17 805 203 0 13 chr5 156553824 156553982 -43076168 - AluSg/x SINE Alu -20 292 137 21 36 0 0 chr5 156554372 156554400 -43075750 + AT_rich Low_complexity Low_complexity 1 28 0 426 315 25 93 chr5 156554473 156554752 -43075398 + L1M4 LINE L1 140 399 -5997 345 121 15 61 chr5 156555045 156555111 -43075039 + MER20 DNA MER1_type 1 63 -156 1596 253 133 33 chr5 156555172 156556043 -43074107 + L1M4 LINE L1 2702 3659 -2556 590 240 64 34 chr5 156556047 156556280 -43073870 + L1M4 LINE L1 3761 4000 -2215 288 54 0 0 chr5 156556284 156556321 -43073829 - L1M3 LINE L1 -443 5728 5692 251 228 92 3 chr5 156556322 156556429 -43073721 + L1M4 LINE L1 5475 5593 -654 2120 256 93 21 chr5 156556434 156557555 -43072595 + L1ME LINE L1 2572 3804 -2342 618 235 81 0 chr5 156557587 156557736 -43072414 + MER58A DNA MER1_type 46 206 -18 2323 93 0 7 chr5 156557855 156558155 -43071995 - AluSg SINE Alu -12 298 1 1841 228 148 51 chr5 156558168 156558240 -43071910 + L1ME LINE L1 4547 4611 -1555 1660 152 71 4 chr5 156558240 156558509 -43071641 - AluJb SINE Alu -25 287 1 1841 228 148 51 chr5 156558509 156558560 -43071590 + L1ME LINE L1 4611 4656 -1510 1785 97 127 0 chr5 156558560 156558827 -43071323 + AluSq SINE Alu 1 301 -2 1841 228 148 51 chr5 156558827 156559727 -43070423 + L1ME LINE L1 4656 5674 -492 1136 191 34 5 chr5 156559953 156560162 -43069988 + MER58A DNA MER1_type 2 216 -8 1891 139 28 0 chr5 156560310 156560598 -43069552 - AluSx SINE Alu -16 296 1 2077 135 0 0 chr5 156560963 156561260 -43068890 - AluSc SINE Alu -12 297 1 378 192 0 0 chr5 156561337 156561410 -43068740 - L1MCb LINE L1 -3970 2594 2522 3752 203 59 55 chr5 156561411 156562683 -43067467 - L1MCb LINE L1 -4883 1162 42 3076 82 17 0 chr5 156562846 156563260 -43066890 + L1PB1 LINE L1 5724 6144 -7 618 96 43 0 chr5 156564134 156564228 -43065922 - L1MC1 LINE L1 0 6333 6236 2604 120 24 7 chr5 156564229 156564638 -43065512 - L1MC1 LINE L1 -179 6154 5739 23 0 0 0 chr5 156565581 156565604 -43064546 + AT_rich Low_complexity Low_complexity 1 23 0 2280 106 6 3 chr5 156566531 156566842 -43063308 + AluSx SINE Alu 1 312 0 2191 110 7 10 chr5 156568742 156569050 -43061100 - AluSx SINE Alu -5 307 1 1633 115 54 70 chr5 156569167 156569498 -43060652 + L1MA4 LINE L1 5970 6295 -5 11525 154 17 16 chr5 156570659 156573559 -43056591 - Harlequin LTR ERV1 -133 6516 1906 2509 58 7 3 chr5 156573559 156573868 -43056282 - AluY SINE Alu -1 310 1 11525 154 17 16 chr5 156573868 156573970 -43056180 - Harlequin LTR ERV1 -4743 1906 1806 271 274 167 0 chr5 156573971 156574055 -43056095 + LTR8 LTR ERV1 156 253 -438 1099 43 0 0 chr5 156574057 156574198 -43055952 - LTR10A-int LTR ERV1 -5176 1720 1580 * 5549 88 10 47 chr5 156574168 156575141 -43055009 - LTR10A-int LTR ERV1 -5475 1421 709 263 196 120 76 chr5 156575149 156575241 -43054909 - LTR10A-int LTR ERV1 -5579 1070 975 * 299 255 47 19 chr5 156575233 156575339 -43054811 - LTR10A-int LTR ERV1 -6039 610 502 875 242 48 26 chr5 156575638 156575911 -43054239 - LTR10A-int LTR ERV1 -6364 285 7 1731 202 145 29 chr5 156575925 156576416 -43053734 - LTR10A LTR ERV1 -61 548 1 281 234 32 0 chr5 156576504 156576598 -43053552 + (TA)n Simple_repeat Simple_repeat 1 97 0 765 133 44 0 chr5 156576616 156576751 -43053399 - L1MB5 LINE L1 -8 6166 6026 4399 191 146 26 chr5 156576773 156577013 -43053137 - Charlie1 DNA MER1_type 0 2761 2551 1853 110 4 15 chr5 156577013 156577276 -43052874 - AluSq SINE Alu -53 260 1 4399 191 146 26 chr5 156577276 156578211 -43051939 - Charlie1 DNA MER1_type -210 2551 1445 234 219 68 41 chr5 156578202 156578275 -43051875 - Charlie1 DNA MER1_type -2686 75 1 * 490 90 0 0 chr5 156578367 156578434 -43051716 + AluS SINE Alu 1 67 -246 2002 116 0 41 chr5 156578467 156578786 -43051364 + AluSx SINE Alu 7 312 0 2427 76 0 7 chr5 156578943 156579247 -43050903 + AluY SINE Alu 1 302 -9 30 27 0 0 chr5 156579746 156579783 -43050367 + AT_rich Low_complexity Low_complexity 1 37 0 350 340 7 20 chr5 156579817 156579967 -43050183 + L3 LINE CR1 877 1024 -553 480 305 60 15 chr5 156580063 156580263 -43049887 + MIR SINE MIR 49 257 -5 717 199 75 40 chr5 156580264 156580554 -43049596 - LTR37B LTR ERV1 0 468 139 512 274 56 22 chr5 156580743 156580922 -43049228 + L1MEd LINE L1 223 407 -5712 730 284 83 48 chr5 156581060 156581617 -43048533 + L1MEd LINE L1 655 1230 -4889 2035 149 0 7 chr5 156582213 156582522 -43047628 + AluSx SINE Alu 1 307 -5 5389 62 14 6 chr5 156584683 156585345 -43044805 + L1PA7 LINE L1 5477 6143 -11 515 146 34 11 chr5 156585345 156585434 -43044716 + L1MA9 LINE L1 5774 5864 -448 1322 262 103 31 chr5 156585533 156585632 -43044518 + L1ME4a LINE L1 5508 5598 -523 2142 130 0 3 chr5 156585632 156585940 -43044210 + AluSx SINE Alu 1 307 -5 1322 262 103 31 chr5 156585940 156586413 -43043737 + L1ME4a LINE L1 5598 6121 0 2284 88 3 3 chr5 156586498 156586836 -43043314 + AluSp SINE Alu 1 338 0 2345 105 0 0 chr5 156587871 156588177 -43041973 - AluSx SINE Alu -6 306 1 479 284 180 16 chr5 156588321 156588571 -43041579 + L2 LINE L2 3012 3302 -11 328 278 83 28 chr5 156588572 156588716 -43041434 - L2 LINE L2 -391 2923 2772 186 333 13 26 chr5 156590379 156590457 -43039693 + MIR SINE MIR 102 178 -84 1929 124 57 10 chr5 156590846 156591144 -43039006 - AluSx SINE Alu 0 312 1 887 282 121 21 chr5 156591241 156591770 -43038380 + L2 LINE L2 2720 3308 -5 203 175 0 0 chr5 156592701 156592741 -43037409 + CT-rich Low_complexity Low_complexity 1 40 0 516 297 134 4 chr5 156592741 156592973 -43037177 + MIR SINE MIR 1 262 0 206 298 48 12 chr5 156593440 156593524 -43036626 - L2 LINE L2 -52 3261 3175 3142 188 30 9 chr5 156593873 156594443 -43035707 - L1MB2 LINE L1 -14 6157 5576 557 251 44 39 chr5 156595302 156595497 -43034653 + MIR SINE MIR 1 183 -65 2157 137 0 0 chr5 156596455 156596762 -43033388 + AluSq SINE Alu 1 307 -6 340 311 84 24 chr5 156597069 156597236 -43032914 - MIR SINE MIR -12 250 74 459 196 159 118 chr5 156597333 156597578 -43032572 - MER112 DNA MER1_type 0 256 2 195 273 104 0 chr5 156599321 156599398 -43030752 - L2 LINE L2 -21 3292 3208 283 310 43 17 chr5 156599505 156599621 -43030529 - L2 LINE L2 -237 3035 2917 405 260 7 78 chr5 156599668 156599822 -43030328 - MIR SINE MIR -60 202 60 1886 151 0 4 chr5 156599893 156600172 -43029978 + AluJo SINE Alu 1 278 -34 1632 32 0 5 chr5 156600172 156600358 -43029792 + L1PA4 LINE L1 5971 6155 0 309 307 42 32 chr5 156602231 156602334 -43027816 - MIR SINE MIR -63 145 61 3184 111 0 29 chr5 156602334 156602777 -43027373 - MER57B LTR ERV1 -4 430 1 309 307 42 32 chr5 156602777 156602823 -43027327 - MIR SINE MIR -147 61 17 385 265 95 14 chr5 156603054 156603201 -43026949 - L3 LINE CR1 -206 1371 1213 494 312 95 20 chr5 156603591 156603844 -43026306 - MLT1K LTR MaLR -56 532 261 450 319 0 14 chr5 156603906 156604050 -43026100 - MLT1K LTR MaLR -424 164 23 216 67 0 0 chr5 156604766 156604796 -43025354 + (T)n Simple_repeat Simple_repeat 1 30 0 186 265 0 20 chr5 156604823 156604872 -43025278 - L2 LINE L2 -4 3268 3221 1678 105 143 4 chr5 156605407 156605673 -43024477 + AluSx SINE Alu 3 305 -7 509 266 149 19 chr5 156606041 156606255 -43023895 + MIR SINE MIR 14 255 -7 497 347 40 0 chr5 156606600 156606773 -43023377 - MIR SINE MIR -40 222 43 234 174 0 0 chr5 156607745 156607791 -43022359 + (CAT)n Simple_repeat Simple_repeat 2 47 0 699 271 89 14 chr5 156607814 156608028 -43022122 + MIR SINE MIR 12 241 -21 524 268 39 0 chr5 156608754 156608907 -43021243 + MIR SINE MIR 70 228 -34 804 284 121 33 chr5 156609491 156609974 -43020176 + L2 LINE L2 2784 3313 0 291 262 0 87 chr5 156610403 156610506 -43019644 - MIR SINE MIR -70 192 99 288 299 68 22 chr5 156610720 156610859 -43019291 - MIR3 SINE MIR -21 187 41 501 47 0 0 chr5 156610989 156611053 -43019097 + (TA)n Simple_repeat Simple_repeat 2 65 0 2379 86 0 3 chr5 156611127 156611430 -43018720 - AluY SINE Alu -9 302 1 1593 239 43 8 chr5 156611485 156611858 -43018292 + MER58D DNA MER1_type 1 386 0 612 300 50 0 chr5 156612062 156612242 -43017908 + MIR SINE MIR 59 247 -15 482 274 94 26 chr5 156614333 156614567 -43015583 + L1ME LINE L1 5532 5781 -340 2382 86 0 0 chr5 156614904 156615196 -43014954 + AluSg SINE Alu 7 298 -12 207 133 0 44 chr5 156615976 156616021 -43014129 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 894 321 60 24 chr5 156616295 156617541 -43012609 - L1ME LINE L1 -468 5702 4409 593 145 0 0 chr5 156618638 156618721 -43011429 - AluJ/FLAM SINE Alu -228 84 2 2481 65 0 7 chr5 156619107 156619413 -43010737 - AluY SINE Alu -7 304 1 336 265 142 51 chr5 156619520 156619894 -43010256 - L1ME4a LINE L1 -9 6112 5705 465 240 134 47 chr5 156620064 156620235 -43009915 + MIR SINE MIR 77 262 0 279 270 0 0 chr5 156620401 156620464 -43009686 - MER113 DNA MER1_type? -2 519 457 2176 95 29 10 chr5 156620541 156620847 -43009303 - AluSx SINE Alu 0 312 1 865 215 130 10 chr5 156620881 156621081 -43009069 - MER58A DNA MER1_type 0 224 1 215 308 13 13 chr5 156622311 156622389 -43007761 + CT-rich Low_complexity Low_complexity 2 79 0 522 237 22 15 chr5 156623080 156623215 -43006935 - MIR SINE MIR -10 252 117 409 291 46 86 chr5 156623293 156623548 -43006602 + MIR SINE MIR 7 253 -9 316 280 77 28 chr5 156623668 156623811 -43006339 - MIR3 SINE MIR -56 152 3 1247 240 76 68 chr5 156624720 156625502 -43004648 - L2 LINE L2 -64 3249 2458 1924 152 0 38 chr5 156625641 156625957 -43004193 - AluSx SINE Alu -8 304 1 205 143 61 20 chr5 156626349 156626398 -43003752 - MER5A DNA MER1_type -85 104 54 340 309 52 51 chr5 156626495 156626640 -43003510 + MIR SINE MIR 1 145 -85 243 0 0 0 chr5 156626640 156626667 -43003483 + (ATG)n Simple_repeat Simple_repeat 2 28 0 340 309 52 51 chr5 156626667 156626688 -43003462 + MIR SINE MIR 145 164 -66 21 0 0 0 chr5 156626828 156626849 -43003301 + AT_rich Low_complexity Low_complexity 1 21 0 453 303 130 29 chr5 156627033 156627271 -43002879 - MIR SINE MIR 0 262 1 1821 181 0 13 chr5 156627867 156628182 -43001968 - AluJb SINE Alu -1 311 1 473 326 125 10 chr5 156629611 156630003 -43000147 - L2 LINE L2 -420 2894 2458 619 129 89 0 chr5 156630201 156630302 -42999848 - AluSc SINE Alu -9 300 191 4175 166 46 14 chr5 156632449 156633230 -42996920 + L1MB7 LINE L1 5379 6184 0 3175 109 2 28 chr5 156633713 156634115 -42996035 + L1PB1 LINE L1 5705 6095 -56 2381 110 0 0 chr5 156634115 156634425 -42995725 + AluSx SINE Alu 1 310 -2 3175 109 2 28 chr5 156634425 156634481 -42995669 + L1PB1 LINE L1 6095 6151 0 394 317 24 0 chr5 156635090 156635249 -42994901 + MIR SINE MIR 50 213 -49 603 265 68 38 chr5 156635286 156635503 -42994647 + MIR SINE MIR 42 262 0 1596 191 126 3 chr5 156635876 156636293 -42993857 - Charlie4a DNA MER1_type 0 508 27 277 270 109 80 chr5 156636940 156637147 -42993003 + L1ME4a LINE L1 5633 5851 -270 2224 110 0 0 chr5 156637147 156637438 -42992712 - AluSc SINE Alu 0 309 19 277 270 109 80 chr5 156637438 156637504 -42992646 + L1ME4a LINE L1 5851 5914 -207 2030 134 7 13 chr5 156637662 156637969 -42992181 - AluSx SINE Alu -7 305 1 27 0 0 0 chr5 156637985 156638012 -42992138 + AT_rich Low_complexity Low_complexity 1 27 0 196 313 82 67 chr5 156638642 156638776 -42991374 + MIR3 SINE MIR 67 202 -6 1000 266 142 23 chr5 156638933 156639504 -42990646 - L2 LINE L2 -33 3280 2640 3246 176 29 13 chr5 156641435 156642049 -42988101 - L1MD1 LINE L1 -5 6237 5614 254 331 110 19 chr5 156642619 156642773 -42987377 - MLT1K LTR MaLR -27 561 394 236 167 0 0 chr5 156644071 156644107 -42986043 - MIR SINE MIR -11 251 216 2080 112 3 14 chr5 156644178 156644314 -42985836 + AluSx SINE Alu 1 137 -175 2148 118 7 7 chr5 156644314 156644618 -42985532 + AluSq SINE Alu 1 304 -9 2080 112 3 14 chr5 156644618 156644775 -42985375 + AluSx SINE Alu 137 291 -21 448 281 118 48 chr5 156645255 156645654 -42984496 - L1ME4a LINE L1 -1 6120 5694 281 336 161 14 chr5 156645698 156645915 -42984235 + MIR SINE MIR 13 261 -1 413 239 18 18 chr5 156645915 156646024 -42984126 - L1ME4a LINE L1 -438 5683 5575 249 273 40 27 chr5 156646118 156646268 -42983882 - L1ME4a LINE L1 -2361 5447 5296 1669 131 21 92 chr5 156646276 156646611 -42983539 - AluSx SINE Alu 0 312 2 1940 163 0 0 chr5 156646734 156647023 -42983127 - AluSx SINE Alu -23 289 1 2432 89 3 0 chr5 156647096 156647399 -42982751 + AluSg SINE Alu 1 304 -6 2452 80 3 0 chr5 156650652 156650952 -42979198 + AluSg SINE Alu 1 301 -9 271 276 20 31 chr5 156651401 156651499 -42978651 - MLT1K LTR MaLR 0 588 492 357 233 217 46 chr5 156651528 156651768 -42978382 - MLT1K LTR MaLR -169 419 139 1262 269 94 48 chr5 156652190 156652863 -42977287 - L1ME4a LINE L1 -58 6063 5360 216 0 0 0 chr5 156654779 156654803 -42975347 + (T)n Simple_repeat Simple_repeat 1 24 0 317 305 9 37 chr5 156656601 156656723 -42973427 + MIR SINE MIR 38 156 -52 247 329 89 27 chr5 156659141 156659287 -42970863 - MER5A DNA MER1_type -18 171 17 202 289 0 0 chr5 156659606 156659658 -42970492 + MIR SINE MIR 79 130 -78 746 243 188 40 chr5 156660069 156660415 -42969735 - MLT1L LTR MaLR -1 614 218 336 324 51 70 chr5 156661613 156661968 -42968182 + L2 LINE L2 2459 2806 -508 242 118 20 78 chr5 156662042 156662093 -42968057 + L2 LINE L2 3265 3312 -1 236 264 94 80 chr5 156662095 156662307 -42967843 + L2 LINE L2 2885 3099 -173 444 181 0 151 chr5 156662595 156662761 -42967389 + MER102b DNA MER1_type 201 341 0 450 231 134 0 chr5 156663937 156664071 -42966079 + MIR SINE MIR 8 159 -103 2232 148 20 12 chr5 156664493 156664837 -42965313 + MER7A DNA MER2_type 1 345 -1 403 238 49 63 chr5 156664838 156664981 -42965169 + MIR SINE MIR 116 256 -6 221 57 29 0 chr5 156665475 156665510 -42964640 + (CCCCCT)n Simple_repeat Simple_repeat 4 39 0 2034 148 0 3 chr5 156666346 156666650 -42963500 + AluSx SINE Alu 3 305 -7 2107 250 99 47 chr5 156666727 156667834 -42962316 + L2 LINE L2 1233 3313 0 2239 169 7 23 chr5 156668885 156669090 -42961060 + L1 LINE L1 4410 4617 -1529 2047 144 0 7 chr5 156669090 156669396 -42960754 + AluSx SINE Alu 1 304 -8 2239 169 7 23 chr5 156669396 156669622 -42960528 + L1 LINE L1 4617 4834 -1312 * 5482 142 59 29 chr5 156669621 156670090 -42960060 + L1MA5A LINE L1 4671 5124 -1173 2177 106 13 3 chr5 156670090 156670391 -42959759 + AluSx SINE Alu 3 306 -6 5482 142 59 29 chr5 156670391 156671503 -42958647 + L1MA5A LINE L1 5124 6297 0 330 252 143 50 chr5 156672011 156672130 -42958020 + MIR SINE MIR 20 149 -59 1418 207 30 10 chr5 156672905 156673200 -42956950 + MER58B DNA MER1_type 40 340 -1 290 310 42 105 chr5 156673259 156673498 -42956652 - L2 LINE L2 -4 3268 3045 56 16 0 0 chr5 156673760 156673823 -42956327 + AT_rich Low_complexity Low_complexity 1 63 0 373 273 22 58 chr5 156673967 156674106 -42956044 + MER5A DNA MER1_type 56 189 0 1963 154 0 0 chr5 156674168 156674461 -42955689 - AluJb SINE Alu -19 293 1 1514 185 31 24 chr5 156674464 156674756 -42955394 - AluJo SINE Alu -14 298 5 375 250 44 102 chr5 156675296 156675539 -42954611 - L1ME LINE L1 -362 5792 5544 441 200 234 28 chr5 156676696 156676841 -42953309 + MER96 DNA MER1_type? 1 175 0 462 264 66 0 chr5 156678600 156678721 -42951429 - L2 LINE L2 0 3313 3185 1210 299 160 12 chr5 156678838 156679795 -42950355 - L2 LINE L2 -164 3149 2041 664 286 31 50 chr5 156679936 156680195 -42949955 + MIR SINE MIR 6 259 -3 2402 63 13 3 chr5 156680195 156680497 -42949653 + AluY SINE Alu 2 306 -5 359 329 114 40 chr5 156680917 156681145 -42949005 - MIR SINE MIR -13 249 5 196 307 129 55 chr5 156681768 156681931 -42948219 + L2 LINE L2 3093 3267 -5 2186 136 0 0 chr5 156681951 156682261 -42947889 - AluSq SINE Alu -3 310 1 2382 91 0 3 chr5 156683227 156683534 -42946616 + AluSg SINE Alu 2 307 -3 2617 259 62 68 chr5 156784988 156785454 -42844696 - L1MEc LINE L1 -4801 1595 1128 2123 120 3 0 chr5 156785454 156785755 -42844395 - AluSp SINE Alu -11 302 1 * 2158 123 0 0 chr5 156785755 156786054 -42844096 - AluSx SINE Alu -13 299 1 2617 259 62 68 chr5 156786054 156786082 -42844068 - L1MEc LINE L1 -5567 829 801 1467 98 0 20 chr5 156786082 156786316 -42843834 + AluSg/x SINE Alu 84 313 0 1506 198 11 4 chr5 156786317 156786595 -42843555 - AluJo SINE Alu -32 280 1 2617 259 62 68 chr5 156786595 156786905 -42843245 - L1MEc LINE L1 -5595 801 491 1933 148 7 3 chr5 156786905 156787195 -42842955 - AluSx SINE Alu -21 291 1 2617 259 62 68 chr5 156787195 156787223 -42842927 - L1MEc LINE L1 -5905 491 464 1907 120 53 0 chr5 156787223 156787506 -42842644 + AluSx SINE Alu 1 298 -14 2617 259 62 68 chr5 156787506 156788145 -42842005 - L1MEc LINE L1 -5932 464 125 2322 92 3 0 chr5 156788145 156788449 -42841701 + AluSx SINE Alu 1 305 -7 2617 259 62 68 chr5 156788449 156788540 -42841610 - L1MEc LINE L1 -6271 125 35 339 370 0 15 chr5 156789932 156790067 -42840083 + MIR SINE MIR 73 205 -57 211 353 138 0 chr5 156790094 156790210 -42839940 + L2 LINE L2 3138 3269 -3 192 40 0 0 chr5 156790277 156790302 -42839848 + (T)n Simple_repeat Simple_repeat 1 25 0 406 121 0 0 chr5 156790322 156790380 -42839770 - AluS SINE Alu -255 58 1 324 135 0 0 chr5 156790481 156790533 -42839617 - MLT1F1 LTR MaLR 0 567 516 322 335 137 30 chr5 156790558 156790625 -42839525 + MIR SINE MIR 2 60 -202 1526 201 35 3 chr5 156790625 156790914 -42839236 + AluJo SINE Alu 1 298 -14 322 335 137 30 chr5 156790914 156791079 -42839071 + MIR SINE MIR 60 259 -3 637 267 237 15 chr5 156791298 156791743 -42838407 - L2 LINE L2 -129 3184 2634 2135 92 0 0 chr5 156792504 156792775 -42837375 + AluSx SINE Alu 1 271 -41 1911 296 155 14 chr5 156792778 156793700 -42836450 + L2 LINE L2 1182 2233 -1081 793 230 31 22 chr5 156793701 156793927 -42836223 - MLT1F1 LTR MaLR 0 567 340 2058 134 7 0 chr5 156794013 156794312 -42835838 + AluSx SINE Alu 3 303 -9 1373 204 54 10 chr5 156794343 156794657 -42835493 - MER74B LTR ERVL -239 383 56 850 164 135 5 chr5 156794655 156794901 -42835249 - MLT1F LTR MaLR -224 343 19 * 1760 281 109 28 chr5 156794922 156795893 -42834257 + L2 LINE L2 2260 3312 -1 25 51 0 0 chr5 156796338 156796377 -42833773 + GC_rich Low_complexity Low_complexity 1 39 0 32 26 0 0 chr5 156796641 156796680 -42833470 + GC_rich Low_complexity Low_complexity 1 39 0 319 307 8 0 chr5 156797931 156798058 -42832092 + GA-rich Low_complexity Low_complexity 2 129 0 321 225 11 70 chr5 156798743 156798930 -42831220 + (TCTCTG)n Simple_repeat Simple_repeat 2 177 0 183 42 0 0 chr5 156799775 156799799 -42830351 + (TC)n Simple_repeat Simple_repeat 2 25 0 441 0 0 0 chr5 156802035 156802084 -42828066 + (TG)n Simple_repeat Simple_repeat 1 49 0 230 313 0 21 chr5 156802400 156802496 -42827654 + G-rich Low_complexity Low_complexity 4 97 0 190 64 0 85 chr5 156802843 156802890 -42827260 + (CAGAGA)n Simple_repeat Simple_repeat 2 44 0 596 57 35 1 chr5 156803371 156803626 -42826524 + MSR1 Satellite Satellite 1 263 -4 593 100 45 3 chr5 156803739 156804063 -42826087 + MSR1 Satellite Satellite 1 337 -17 346 351 116 41 chr5 156804818 156805059 -42825091 + L1M4c LINE L1 953 1174 -1569 180 0 0 0 chr5 156805059 156805079 -42825071 + (TA)n Simple_repeat Simple_repeat 2 21 0 346 351 116 41 chr5 156805079 156805377 -42824773 + L1M4c LINE L1 1174 1510 -1233 327 85 0 0 chr5 156805377 156805424 -42824726 + (GA)n Simple_repeat Simple_repeat 1 47 0 363 360 120 37 chr5 156805428 156806136 -42824014 + L1M4c LINE L1 933 1650 -4663 2496 53 0 3 chr5 156806136 156806440 -42823710 + AluY SINE Alu 1 303 -8 363 360 120 37 chr5 156806440 156806504 -42823646 + L1M4c LINE L1 1650 1707 -4606 1768 166 17 0 chr5 156806519 156806808 -42823342 + AluJo SINE Alu 5 298 -14 284 233 29 39 chr5 156806845 156806948 -42823202 + (CAGAGA)n Simple_repeat Simple_repeat 1 102 0 300 185 12 0 chr5 156807446 156807527 -42822623 - MSR1 Satellite Satellite -20 91 10 321 288 25 17 chr5 156807963 156808081 -42822069 - MIR SINE MIR -119 143 25 201 94 0 0 chr5 156808404 156808436 -42821714 + (CA)n Simple_repeat Simple_repeat 1 32 0 1799 151 10 13 chr5 156808711 156809015 -42821135 + AluJb SINE Alu 1 303 -9 2020 111 7 7 chr5 156809016 156809304 -42820846 + AluSc SINE Alu 2 289 -20 573 137 17 19 chr5 156809920 156810120 -42820030 + MSR1 Satellite Satellite 1 199 -3 596 121 19 0 chr5 156810851 156811030 -42819120 - MSR1 Satellite Satellite 0 182 1 2134 105 7 0 chr5 156811232 156811550 -42818600 + AluSq SINE Alu 1 313 0 1445 170 69 36 chr5 156811550 156811681 -42818469 + AluJb SINE Alu 2 127 -196 2268 110 0 0 chr5 156811681 156811989 -42818161 + AluSq SINE Alu 1 308 -5 1445 170 69 36 chr5 156811989 156812170 -42817980 + AluJb SINE Alu 127 323 0 27 0 0 0 chr5 156812170 156812197 -42817953 + AT_rich Low_complexity Low_complexity 1 27 0 2285 92 0 0 chr5 156812378 156812673 -42817477 + AluSx SINE Alu 1 295 -17 1014 240 68 38 chr5 156812822 156813116 -42817034 - L1ME3 LINE L1 -130 6032 5721 2125 118 0 0 chr5 156813116 156813412 -42816738 - AluSx SINE Alu -16 296 1 1014 240 68 38 chr5 156813412 156813517 -42816633 - L1ME3 LINE L1 -441 5721 5621 240 250 58 0 chr5 156814327 156814379 -42815771 + MIR SINE MIR 117 171 -91 1684 168 3 7 chr5 156814457 156814755 -42815395 + AluJb SINE Alu 1 297 -15 2532 44 0 0 chr5 156814832 156815126 -42815024 - AluY SINE Alu -17 294 1 2085 125 3 0 chr5 156815135 156815424 -42814726 - AluSx SINE Alu -22 290 1 372 323 18 61 chr5 156815424 156815588 -42814562 - L2 LINE L2 -7 3306 3150 555 258 55 22 chr5 156815599 156815873 -42814277 - L2 LINE L2 -311 3002 2708 1318 169 22 29 chr5 156815877 156816149 -42814001 - L1MB8 LINE L1 0 6178 5909 1840 140 28 0 chr5 156816149 156816435 -42813715 + AluJo SINE Alu 1 294 -18 2268 104 3 3 chr5 156816456 156816765 -42813385 + AluSx SINE Alu 4 312 0 255 61 0 0 chr5 156817252 156817285 -42812865 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2149 86 3 43 chr5 156818028 156818352 -42811798 - AluSx SINE Alu -1 311 1 486 241 9 9 chr5 156818355 156818471 -42811679 + MIR SINE MIR 58 173 -89 215 154 0 62 chr5 156818492 156818557 -42811593 + (TCTG)n Simple_repeat Simple_repeat 2 62 0 2063 112 0 11 chr5 156818648 156818974 -42811176 + AluSx SINE Alu 1 323 0 672 84 22 7 chr5 156819359 156819525 -42810625 - MSR1 Satellite Satellite 0 168 1 644 124 2 15 chr5 156819555 156819927 -42810223 - MSR1 Satellite Satellite 0 367 1 2234 85 3 0 chr5 156820407 156820702 -42809448 + AluY SINE Alu 1 296 -15 241 298 84 15 chr5 156821003 156821134 -42809016 - HAL1b LINE L1 -5 1343 1204 1730 157 3 18 chr5 156821314 156821511 -42808639 - AluJb SINE Alu -30 282 89 2086 132 0 0 chr5 156821511 156821807 -42808343 - AluSx SINE Alu -15 297 2 1730 157 3 18 chr5 156821807 156821895 -42808255 - AluJb SINE Alu -223 89 1 442 271 172 20 chr5 156821968 156822171 -42807979 - L2 LINE L2 -46 3267 3034 1670 163 7 23 chr5 156822201 156822507 -42807643 + AluJb SINE Alu 1 301 -11 349 333 92 17 chr5 156822521 156822695 -42807455 - L1MC5 LINE L1 -53 7908 7722 833 91 15 0 chr5 156822838 156822970 -42807180 + (TTCC)n Simple_repeat Simple_repeat 1 134 0 180 0 0 0 chr5 156822969 156822989 -42807161 + (TCCCC)n Simple_repeat Simple_repeat 5 24 0 * 1977 107 11 4 chr5 156822989 156823269 -42806881 - AluSc SINE Alu -24 285 4 915 183 30 0 chr5 156823311 156823480 -42806670 - AluJb SINE Alu -6 306 133 207 0 0 0 chr5 156823481 156823504 -42806646 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 2039 130 0 0 chr5 156823504 156823789 -42806361 - AluSx SINE Alu -27 285 1 1397 270 61 28 chr5 156823832 156824442 -42805708 - L1ME3 LINE L1 -3 6167 5554 1780 143 31 0 chr5 156824501 156824787 -42805363 + AluJb SINE Alu 1 295 -17 2420 56 0 3 chr5 156824825 156825130 -42805020 + AluY SINE Alu 1 304 -7 1063 172 0 11 chr5 156827064 156827230 -42802920 - AluJo SINE Alu -13 299 134 2079 108 20 3 chr5 156827230 156827525 -42802625 - AluSx SINE Alu -12 300 1 1063 172 0 11 chr5 156827525 156827538 -42802612 - AluJo SINE Alu -178 134 122 756 140 11 17 chr5 156827646 156827824 -42802326 + (TCTCTG)n Simple_repeat Simple_repeat 4 180 0 231 69 0 69 chr5 156827843 156827901 -42802249 + (TCTCTG)n Simple_repeat Simple_repeat 1 54 0 295 226 11 85 chr5 156828612 156828789 -42801361 + CT-rich Low_complexity Low_complexity 1 164 0 305 229 208 0 chr5 156829554 156829650 -42800500 - MIR SINE MIR -144 118 3 1535 211 50 137 chr5 156829653 156829735 -42800415 - L1ME2 LINE L1 -1 6163 6076 2102 83 6 58 chr5 156829735 156829884 -42800266 + AluSx SINE Alu 1 127 -185 2245 100 0 7 chr5 156829884 156830193 -42799957 + AluY SINE Alu 3 309 -2 2102 83 6 58 chr5 156830193 156830356 -42799794 + AluSx SINE Alu 127 297 -15 1535 211 50 137 chr5 156830356 156830737 -42799413 - L1ME2 LINE L1 -88 6076 5664 1862 111 0 0 chr5 156830737 156830990 -42799160 - AluSx SINE Alu -9 303 51 1468 126 0 0 chr5 156830990 156831194 -42798956 + AluSg/x SINE Alu 94 299 -13 2225 87 3 3 chr5 156831194 156831492 -42798658 + AluSp SINE Alu 4 301 -12 429 143 0 0 chr5 156831493 156831556 -42798594 - AluSx SINE Alu -255 63 1 1535 211 50 137 chr5 156831556 156831567 -42798583 - L1ME2 LINE L1 -498 5666 5656 2547 43 0 3 chr5 156831567 156831872 -42798278 - AluY SINE Alu -7 304 1 2358 80 3 0 chr5 156831872 156832173 -42797977 - AluSg SINE Alu -8 302 1 1535 211 50 137 chr5 156832173 156832405 -42797745 - L1ME2 LINE L1 -506 5658 5455 241 250 15 15 chr5 156832782 156832850 -42797300 - MIR SINE MIR -71 137 70 1898 109 71 14 chr5 156832952 156833235 -42796915 - AluSx SINE Alu -2 310 12 1664 118 95 4 chr5 156833858 156834145 -42796005 - AluSx SINE Alu 0 311 1 2281 105 3 0 chr5 156834200 156834505 -42795645 + AluSg SINE Alu 1 306 -4 2316 70 0 13 chr5 156834763 156835061 -42795089 + AluSg SINE Alu 1 294 -16 693 167 7 58 chr5 156835072 156835210 -42794940 + FLAM_C SINE Alu 3 133 0 2255 69 7 7 chr5 156835388 156835677 -42794473 + AluSq SINE Alu 1 289 -24 786 166 36 5 chr5 156835902 156836071 -42794079 + MER5A DNA MER1_type 6 180 -9 22 35 0 0 chr5 156836386 156836415 -42793735 + GC_rich Low_complexity Low_complexity 1 29 0 240 248 0 40 chr5 156837038 156837163 -42792987 + (CCCCG)n Simple_repeat Simple_repeat 5 124 0 330 289 126 0 chr5 156838186 156838321 -42791829 - Charlie8 DNA MER1_type -2261 156 5 700 303 134 7 chr5 156839064 156839252 -42790898 - L2 LINE L2 -6 3307 3144 1552 209 82 126 chr5 156839252 156839840 -42790310 - MER68 LTR ERV1 0 562 1 700 303 134 7 chr5 156839840 156840144 -42790006 - L2 LINE L2 -169 3144 2747 687 198 8 0 chr5 156840146 156840272 -42789878 - FLAM_C SINE Alu -6 127 1 1802 172 3 7 chr5 156840275 156840583 -42789567 - AluJo SINE Alu -5 307 1 1090 161 0 0 chr5 156840718 156840898 -42789252 - AluSg/x SINE Alu 0 310 131 2277 82 0 19 chr5 156840898 156841217 -42788933 - AluSq SINE Alu 0 313 1 196 77 26 26 chr5 156841221 156841260 -42788890 - L2 LINE L2 -243 3070 3032 748 173 113 35 chr5 156841426 156841567 -42788583 + MER33 DNA MER1_type 6 173 -2412 1930 146 7 3 chr5 156841567 156841703 -42788447 + AluSx SINE Alu 1 135 -177 2297 80 0 7 chr5 156841703 156842003 -42788147 + AluSg1 SINE Alu 1 298 -11 1930 146 7 3 chr5 156842003 156842161 -42787989 + AluSx SINE Alu 135 296 -16 748 173 113 35 chr5 156842161 156842250 -42787900 + MER33 DNA MER1_type 173 254 -70 2312 61 34 3 chr5 156842266 156842562 -42787588 + AluY SINE Alu 1 305 -6 1530 188 10 23 chr5 156842571 156842875 -42787275 + AluJo SINE Alu 1 300 -12 1957 140 0 10 chr5 156842878 156843170 -42786980 + AluJb SINE Alu 2 290 -22 2197 129 0 0 chr5 156843217 156843526 -42786624 + AluSx SINE Alu 3 311 -1 362 82 0 59 chr5 156843567 156843652 -42786498 + (GGGGA)n Simple_repeat Simple_repeat 4 83 0 725 144 127 0 chr5 156844424 156844542 -42785608 + AluJo/FLAM SINE Alu 1 133 -179 2019 120 3 25 chr5 156844545 156844861 -42785289 + AluSg SINE Alu 2 310 0 1080 180 48 48 chr5 156845119 156845347 -42784803 + AluJo SINE Alu 67 294 -18 2428 67 0 0 chr5 156845363 156845663 -42784487 - AluY SINE Alu -11 300 1 1237 155 9 18 chr5 156846405 156846631 -42783519 + AluJo SINE Alu 87 310 -2 189 0 0 0 chr5 156847580 156847601 -42782549 + (TTTAA)n Simple_repeat Simple_repeat 3 23 0 2261 94 0 3 chr5 156847601 156847899 -42782251 - AluSc SINE Alu -12 297 1 2012 136 3 0 chr5 156847899 156848194 -42781956 - AluSx SINE Alu -16 296 1 1061 138 102 49 chr5 156848196 156848421 -42781729 - AluJb SINE Alu -10 302 66 1907 109 29 4 chr5 156849303 156849611 -42780539 + AluSx SINE Alu 1 315 0 1539 135 12 24 chr5 156849640 156849892 -42780258 + AluJo SINE Alu 46 294 -18 1931 124 0 54 chr5 156850571 156850886 -42779264 - AluSx SINE Alu -14 298 1 2316 85 7 0 chr5 156851415 156851720 -42778430 - AluSx SINE Alu -5 307 1 2220 70 0 30 chr5 156851849 156852150 -42778000 - AluY SINE Alu -19 292 1 1831 146 24 0 chr5 156852158 156852446 -42777704 - AluJo SINE Alu -17 295 1 600 189 68 27 chr5 156852484 156852632 -42777518 - MLT1D LTR MaLR -349 156 3 1517 136 6 121 chr5 156853040 156853214 -42776936 + AluY SINE Alu 1 120 -181 2362 53 0 3 chr5 156853214 156853523 -42776627 + AluY SINE Alu 1 308 0 1517 136 6 121 chr5 156853523 156853685 -42776465 + AluY SINE Alu 120 299 -2 22 70 0 0 chr5 156854833 156854876 -42775274 + GC_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr5 156855325 156855361 -42774789 + GC_rich Low_complexity Low_complexity 1 36 0 200 111 48 79 chr5 156855489 156855552 -42774598 + C-rich Low_complexity Low_complexity 6 66 0 650 125 8 20 chr5 156855904 156856343 -42773807 - MSR1 Satellite Satellite 0 434 1 186 171 0 0 chr5 156857533 156857574 -42772576 + (CAGAGA)n Simple_repeat Simple_repeat 4 44 0 180 45 23 68 chr5 156857625 156857669 -42772481 + (CAGA)n Simple_repeat Simple_repeat 1 42 0 180 0 0 0 chr5 156858386 156858406 -42771744 + (CCCCCA)n Simple_repeat Simple_repeat 4 23 0 201 290 6 47 chr5 156858809 156858978 -42771172 + (TCTCTG)n Simple_repeat Simple_repeat 1 162 0 225 309 21 0 chr5 156859272 156859369 -42770781 + CT-rich Low_complexity Low_complexity 2 100 0 654 139 12 11 chr5 156859569 156859997 -42770153 + MSR1 Satellite Satellite 1 428 -9 288 0 0 0 chr5 156860273 156860305 -42769845 + (CA)n Simple_repeat Simple_repeat 2 33 0 213 268 0 0 chr5 156860483 156860539 -42769611 + C-rich Low_complexity Low_complexity 4 59 0 192 40 0 0 chr5 156860631 156860656 -42769494 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 642 55 30 0 chr5 156861555 156861723 -42768427 - MSR1 Satellite Satellite 0 173 1 599 152 0 0 chr5 156861877 156861969 -42768181 + AluJ/FLAM SINE Alu 6 97 -215 811 191 77 52 chr5 156861969 156862163 -42767987 + AluJo SINE Alu 8 206 -106 1691 132 0 0 chr5 156862167 156862417 -42767733 + AluSg SINE Alu 60 309 -1 299 292 0 0 chr5 156862463 156862552 -42767598 + L1M2 LINE L1 5452 5540 -772 1492 167 86 0 chr5 156862779 156863048 -42767102 - AluJb SINE Alu -18 294 3 2142 122 0 10 chr5 156863197 156863508 -42766642 + AluSq SINE Alu 1 308 -5 826 188 0 0 chr5 156863627 156863760 -42766390 + AluJ SINE Alu 1 133 -169 377 299 172 9 chr5 156863902 156864123 -42766027 + MIR SINE MIR 1 257 -5 225 0 0 0 chr5 156864601 156864626 -42765524 + (A)n Simple_repeat Simple_repeat 1 25 0 263 294 0 17 chr5 156865822 156865936 -42764214 + C-rich Low_complexity Low_complexity 2 170 0 308 203 0 0 chr5 156866138 156866197 -42763953 + L2 LINE L2 3213 3271 -1 2254 97 0 13 chr5 156866234 156866543 -42763607 + AluSx SINE Alu 4 308 -4 1122 110 12 0 chr5 156866555 156866719 -42763431 + AluJ SINE Alu 136 301 -11 856 139 0 36 chr5 156867118 156867255 -42762895 + FLAM_C SINE Alu 2 133 0 27 0 0 26 chr5 156867257 156867270 -42762880 + AT_rich Low_complexity Low_complexity 1 13 -24 2349 72 0 0 chr5 156867270 156867561 -42762589 - AluY SINE Alu -20 291 1 27 0 0 26 chr5 156867561 156867585 -42762565 + AT_rich Low_complexity Low_complexity 13 37 0 2272 91 0 28 chr5 156867589 156867908 -42762242 + AluSx SINE Alu 1 310 -2 227 360 0 0 chr5 156868640 156868715 -42761435 + MIR SINE MIR 58 132 -76 2335 68 0 3 chr5 156868761 156869053 -42761097 + AluSc SINE Alu 1 291 -18 266 227 106 0 chr5 156869300 156869366 -42760784 + MIR SINE MIR 47 119 -89 437 289 59 0 chr5 156870080 156870232 -42759918 + MIR SINE MIR 59 219 -43 1625 185 10 10 chr5 156870497 156870789 -42759361 + AluJo SINE Alu 5 296 -16 238 261 0 0 chr5 156871613 156871678 -42758472 - MIR SINE MIR -78 130 66 186 206 0 0 chr5 156871757 156871791 -42758359 - L2 LINE L2 -98 3215 3182 224 363 37 30 chr5 156871906 156872234 -42757916 - L2 LINE L2 -432 2882 2553 243 0 0 0 chr5 156872515 156872542 -42757608 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 526 116 47 0 chr5 156872822 156872908 -42757242 + MLT1I LTR MaLR 318 407 -2 1108 279 41 3 chr5 156873092 156873411 -42756739 - MER102b DNA MER1_type -1 340 10 180 88 0 88 chr5 156873414 156873448 -42756702 - MIR SINE MIR -65 143 113 375 234 191 0 chr5 156873536 156873677 -42756473 - MIR SINE MIR -5 257 90 957 129 0 0 chr5 156873769 156873901 -42756249 + FLAM_C SINE Alu 1 132 -1 1601 161 31 0 chr5 156875848 156876108 -42754042 - AluJb SINE Alu -22 290 23 327 293 85 19 chr5 156876178 156876199 -42753951 - L1MC4 LINE L1 -1318 6724 6706 1927 142 7 0 chr5 156876199 156876480 -42753670 + AluJb SINE Alu 1 283 -29 327 293 85 19 chr5 156876480 156876564 -42753586 - L1MC4 LINE L1 -1336 6706 6612 1720 171 101 23 chr5 156876566 156876993 -42753157 - L1MC1 LINE L1 -33 6300 5841 977 97 35 14 chr5 156877053 156877197 -42752953 - AluSg/x SINE Alu -57 253 107 2444 62 0 0 chr5 156877198 156877507 -42752643 - AluY SINE Alu -2 309 1 312 93 19 0 chr5 156877507 156877561 -42752589 - AluY SINE Alu -166 135 81 289 26 0 0 chr5 156877747 156877785 -42752365 + AluY SINE Alu 1 38 -265 1614 176 104 24 chr5 156877850 156878264 -42751886 + L1MC1 LINE L1 5841 6287 -46 2104 77 4 0 chr5 156878274 156878547 -42751603 + AluY SINE Alu 21 294 -17 276 282 59 0 chr5 156878579 156878664 -42751486 + MIR SINE MIR 49 138 -124 1394 210 86 26 chr5 156878737 156879123 -42751027 + LTR65 LTR ERV1 167 575 -94 21 0 0 0 chr5 156879128 156879149 -42751001 + AT_rich Low_complexity Low_complexity 1 21 0 2134 113 3 0 chr5 156879218 156879518 -42750632 + AluSx SINE Alu 1 301 -11 185 256 60 83 chr5 156879917 156880050 -42750100 + MIR SINE MIR 123 252 -10 235 171 0 0 chr5 156880055 156880096 -42750054 + L2 LINE L2 3264 3304 -9 21 0 0 0 chr5 156880152 156880173 -42749977 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 156881074 156881112 -42749038 + GC_rich Low_complexity Low_complexity 1 38 0 626 261 85 10 chr5 156882213 156882412 -42747738 + MIR SINE MIR 35 248 -14 344 174 58 0 chr5 156883667 156883736 -42746414 + MER58B DNA MER1_type 242 314 -27 1411 150 92 19 chr5 156883736 156883996 -42746154 - AluJo SINE Alu -13 299 21 272 349 48 15 chr5 156884004 156884206 -42745944 - MIR3 SINE MIR -36 226 14 2117 101 7 0 chr5 156884554 156884850 -42745300 - AluSc SINE Alu -11 298 1 1862 93 16 4 chr5 156885830 156886087 -42744063 + AluSx SINE Alu 37 296 -16 2432 65 0 3 chr5 156886375 156886681 -42743469 + AluY SINE Alu 1 305 -6 2259 81 0 3 chr5 156886681 156886976 -42743174 + AluSg SINE Alu 1 294 -16 397 115 55 192 chr5 156887351 156887444 -42742706 + MER2 DNA MER2_type 14 118 -227 2293 64 0 10 chr5 156887444 156887740 -42742410 + AluY SINE Alu 1 293 -18 1221 160 217 0 chr5 156887746 156887990 -42742160 + AluJb SINE Alu 1 297 -5 397 115 55 192 chr5 156887990 156888021 -42742129 + MER2 DNA MER2_type 123 117 -228 2064 100 0 27 chr5 156888021 156888321 -42741829 - AluSx SINE Alu -20 292 1 397 115 55 192 chr5 156888321 156888370 -42741780 + MER2 DNA MER2_type 116 170 -175 980 139 0 51 chr5 156888379 156888537 -42741613 + FRAM SINE Alu 12 161 -15 2120 119 3 0 chr5 156890670 156890965 -42739185 + AluSp SINE Alu 1 296 -17 220 257 211 13 chr5 156891544 156891556 -42738594 + MIR SINE MIR 96 104 -158 2353 109 0 0 chr5 156891556 156891868 -42738282 - AluSx SINE Alu 0 312 1 220 257 211 13 chr5 156891868 156891951 -42738199 + MIR SINE MIR 104 208 -54 937 152 26 0 chr5 156892134 156892285 -42737865 - AluSg/x SINE Alu -20 290 136 258 308 103 9 chr5 156893092 156893199 -42736951 + MIR SINE MIR 22 138 -124 2049 120 13 0 chr5 156893321 156893620 -42736530 + AluSp SINE Alu 1 303 -10 260 324 169 7 chr5 156893645 156893787 -42736363 - MIR SINE MIR -85 177 13 185 208 83 69 chr5 156894314 156894386 -42735764 - MIR SINE MIR -119 89 17 1579 81 19 0 chr5 156894408 156894619 -42735531 - AluY SINE Alu -96 215 1 326 151 0 0 chr5 156894644 156894697 -42735453 + AluSx SINE Alu 34 86 -216 1714 114 141 4 chr5 156894699 156894962 -42735188 + AluSq SINE Alu 1 299 -4 1487 122 14 14 chr5 156894962 156895183 -42734967 + AluSx SINE Alu 73 293 -19 1553 164 40 11 chr5 156895291 156895407 -42734743 + AluJo SINE Alu 21 132 -180 2134 112 0 7 chr5 156895407 156895712 -42734438 + AluY SINE Alu 1 303 -8 1553 164 40 11 chr5 156895712 156895869 -42734281 + AluJo SINE Alu 132 302 -10 2303 89 0 3 chr5 156895871 156896175 -42733975 + AluSx SINE Alu 1 303 -9 354 365 31 6 chr5 156896415 156896579 -42733571 - L1MC/D LINE L1 -495 5838 5665 285 216 72 64 chr5 156896671 156896796 -42733354 + MIR3 SINE MIR 32 157 -51 908 133 0 15 chr5 156896834 156896969 -42733181 + FLAM_C SINE Alu 1 133 0 1903 160 10 0 chr5 156896981 156897288 -42732862 - AluSp SINE Alu -3 310 1 222 380 20 10 chr5 156897373 156897473 -42732677 - MIR SINE MIR -95 167 67 235 290 140 21 chr5 156897507 156897600 -42732550 - MIR SINE MIR -1 261 158 209 190 35 35 chr5 156898696 156898754 -42731396 + CT-rich Low_complexity Low_complexity 2 59 0 391 320 72 10 chr5 156899007 156899216 -42730934 + MIR SINE MIR 5 227 -35 355 348 22 7 chr5 156900431 156900566 -42729584 + MIR SINE MIR 109 245 -17 1438 143 0 37 chr5 156900835 156901079 -42729071 + AluJo SINE Alu 39 273 -39 462 101 0 0 chr5 156901079 156901148 -42729002 + (GA)n Simple_repeat Simple_repeat 2 70 0 388 61 0 45 chr5 156901134 156901200 -42728950 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 * 184 273 11 68 chr5 156901200 156901288 -42728862 + MIR SINE MIR 35 117 -91 2155 83 59 0 chr5 156902358 156902646 -42727504 - AluSx SINE Alu -7 305 1 2021 99 39 3 chr5 156902648 156902932 -42727218 - AluSx SINE Alu -7 305 12 185 237 0 13 chr5 156903211 156903287 -42726863 + GA-rich Low_complexity Low_complexity 1 75 0 208 255 6 89 chr5 156903340 156903497 -42726653 + GA-rich Low_complexity Low_complexity 1 144 0 324 216 12 56 chr5 156903707 156903869 -42726281 + (CGGGG)n Simple_repeat Simple_repeat 1 155 0 202 211 0 0 chr5 156904125 156904163 -42725987 + MIR SINE MIR 108 145 -117 293 292 10 42 chr5 156904272 156904368 -42725782 - MIR SINE MIR -65 143 51 296 364 8 8 chr5 156904573 156904691 -42725459 - MIR SINE MIR -61 147 30 24 0 0 0 chr5 156904875 156904899 -42725251 + GC_rich Low_complexity Low_complexity 1 24 0 2277 78 0 3 chr5 156906148 156906468 -42723682 - AluSc SINE Alu 0 309 1 1778 151 32 4 chr5 156906470 156906749 -42723401 - AluJb SINE Alu -21 291 5 613 311 156 0 chr5 156906766 156906978 -42723172 + MIR SINE MIR 18 262 0 844 129 0 0 chr5 156907173 156907289 -42722861 - FLAM_C SINE Alu -17 116 1 214 264 0 35 chr5 156907678 156907765 -42722385 + GA-rich Low_complexity Low_complexity 2 85 0 202 260 14 14 chr5 156907892 156907965 -42722185 + GA-rich Low_complexity Low_complexity 1 73 0 327 294 18 18 chr5 156910611 156910720 -42719430 - MIR3 SINE MIR -14 194 86 964 130 45 7 chr5 156910915 156911069 -42719081 + AluJb SINE Alu 138 297 -15 2000 100 12 63 chr5 156911073 156911207 -42718943 + AluSx SINE Alu 1 140 -172 1863 126 4 0 chr5 156911207 156911468 -42718682 + AluSx SINE Alu 1 262 -50 2000 100 12 63 chr5 156911468 156911652 -42718498 + AluSx SINE Alu 140 303 -9 670 201 98 103 chr5 156911925 156911988 -42718162 + MIR SINE MIR 34 96 -166 189 0 0 0 chr5 156911988 156912009 -42718141 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 1927 122 0 7 chr5 156912014 156912292 -42717858 - AluSq SINE Alu -37 276 1 670 201 98 103 chr5 156912292 156912436 -42717714 + MIR SINE MIR 100 246 -16 660 72 12 16 chr5 156914013 156914923 -42715227 - MSR1 Satellite Satellite -2 906 1 501 76 0 12 chr5 156915023 156915120 -42715030 - MSR1 Satellite Satellite 0 95 1 423 52 0 0 chr5 156915251 156915309 -42714841 + (TG)n Simple_repeat Simple_repeat 2 59 0 568 98 37 0 chr5 156915824 156916365 -42713785 - MSR1 Satellite Satellite -1 561 1 207 241 52 112 chr5 156917040 156917156 -42712994 + MIR SINE MIR 45 153 -55 306 226 27 18 chr5 156917753 156917986 -42712164 + CT-rich Low_complexity Low_complexity 1 235 0 242 389 6 6 chr5 156918088 156918263 -42711887 + C-rich Low_complexity Low_complexity 6 180 0 258 253 53 0 chr5 156918872 156919042 -42711108 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 380 297 51 0 chr5 156920009 156920127 -42710023 + MIR SINE MIR 117 240 -22 1952 148 13 10 chr5 156920128 156920439 -42709711 - AluJb SINE Alu 0 312 1 2211 63 70 0 chr5 156920656 156920940 -42709210 - AluSp SINE Alu -9 304 1 569 279 40 35 chr5 156921096 156921202 -42708948 + MER3 DNA MER1_type 3 112 -97 1957 138 0 24 chr5 156921202 156921500 -42708650 + AluSx SINE Alu 1 291 -21 569 279 40 35 chr5 156921500 156921594 -42708556 + MER3 DNA MER1_type 112 204 -5 262 267 0 0 chr5 156921792 156921852 -42708298 - MER81 DNA DNA 0 114 55 2317 76 7 3 chr5 156921937 156922240 -42707910 - AluSc SINE Alu -5 304 1 2214 106 3 6 chr5 156922290 156922601 -42707549 - AluSg SINE Alu 0 310 1 1791 162 0 36 chr5 156922602 156922904 -42707246 - AluJb SINE Alu -21 291 1 239 193 0 18 chr5 156923817 156923874 -42706276 - MSR1 Satellite Satellite -25 86 31 1477 149 4 16 chr5 156924124 156924373 -42705777 - AluJb SINE Alu -66 246 1 388 275 6 6 chr5 156926519 156926697 -42703453 + (TG)n Simple_repeat Simple_repeat 1 178 0 240 253 0 33 chr5 156926725 156926860 -42703290 + (TCTCTG)n Simple_repeat Simple_repeat 1 130 0 259 297 11 22 chr5 156927199 156927290 -42702860 - MER91B DNA MER1_type 0 190 101 207 127 48 16 chr5 156928163 156928226 -42701924 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 22 0 0 0 chr5 156928575 156928597 -42701553 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr5 156928714 156928736 -42701414 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 180 0 0 0 chr5 156934438 156934458 -42695692 + (CCCG)n Simple_repeat Simple_repeat 3 22 0 456 267 11 47 chr5 156935481 156935851 -42694299 + CT-rich Low_complexity Low_complexity 1 356 0 293 117 81 9 chr5 156935961 156936072 -42694078 + (CA)n Simple_repeat Simple_repeat 1 119 0 448 111 62 25 chr5 156936116 156936278 -42693872 + (CA)n Simple_repeat Simple_repeat 2 169 0 258 103 77 26 chr5 156936299 156936416 -42693734 + (CA)n Simple_repeat Simple_repeat 1 123 0 216 0 0 0 chr5 156936774 156936798 -42693352 + (CA)n Simple_repeat Simple_repeat 2 25 0 334 261 0 48 chr5 156937219 156937466 -42692684 + (CA)n Simple_repeat Simple_repeat 1 235 0 226 212 26 85 chr5 156937402 156937591 -42692559 + (ACATG)n Simple_repeat Simple_repeat 3 180 0 * 248 162 58 78 chr5 156937625 156937779 -42692371 + (ACATG)n Simple_repeat Simple_repeat 1 151 0 227 112 0 90 chr5 156938168 156938257 -42691893 + (TCTCTG)n Simple_repeat Simple_repeat 3 83 0 262 269 8 37 chr5 156938655 156938789 -42691361 + (CAGAGA)n Simple_repeat Simple_repeat 1 130 0 598 277 78 15 chr5 156939510 156939716 -42690434 + MIR SINE MIR 15 233 -29 200 194 0 0 chr5 156939880 156939916 -42690234 + MER5A DNA MER1_type 150 185 -4 31 44 0 0 chr5 156941942 156941987 -42688163 + GC_rich Low_complexity Low_complexity 1 45 0 324 255 3 29 chr5 156942126 156942436 -42687714 + GA-rich Low_complexity Low_complexity 1 302 0 381 102 0 0 chr5 156943317 156943376 -42686774 + (TCC)n Simple_repeat Simple_repeat 1 59 0 28 29 0 0 chr5 156943448 156943483 -42686667 + GC_rich Low_complexity Low_complexity 1 35 0 211 204 23 0 chr5 156943637 156943681 -42686469 + C-rich Low_complexity Low_complexity 2 46 0 211 267 38 9 chr5 156943810 156943915 -42686235 + (CAGA)n Simple_repeat Simple_repeat 2 109 0 * 238 256 11 11 chr5 156943852 156943942 -42686208 + (CA)n Simple_repeat Simple_repeat 1 90 0 247 300 8 31 chr5 156944377 156944507 -42685643 + C-rich Low_complexity Low_complexity 4 130 0 456 322 20 7 chr5 156944784 156944936 -42685214 + MIR SINE MIR 90 243 -19 194 256 0 0 chr5 156946168 156946211 -42683939 + L2 LINE L2 3210 3252 -20 852 250 68 36 chr5 156946818 156947070 -42683080 - MIR SINE MIR -1 261 2 183 306 97 0 chr5 156947221 156947293 -42682857 + L2 LINE L2 3200 3278 -35 218 128 43 0 chr5 156947298 156947345 -42682805 + GA-rich Low_complexity Low_complexity 1 49 0 291 243 20 0 chr5 156948303 156948455 -42681695 + GA-rich Low_complexity Low_complexity 1 155 0 1572 115 0 65 chr5 157049240 157049561 -42580589 + AluSx SINE Alu 6 305 -7 3747 96 12 67 chr5 157049589 157050351 -42579799 - L1PA10 LINE L1 -12 6156 5437 339 346 39 0 chr5 157050851 157050981 -42579169 - L2 LINE L2 0 3313 3179 2274 98 0 0 chr5 157052631 157052927 -42577223 + AluSg SINE Alu 1 296 -14 373 321 46 41 chr5 157053281 157053499 -42576651 - MLT1K LTR MaLR -369 219 1 1721 133 8 4 chr5 157053701 157053957 -42576193 - AluSg SINE Alu -53 257 1 1477 257 76 9 chr5 157053974 157054511 -42575639 - L1M4 LINE L1 -1832 4314 3742 835 283 107 3 chr5 157054543 157054942 -42575208 - L1ME2 LINE L1 -72 6092 5705 1439 208 8 13 chr5 157054942 157055335 -42574815 - MSTB2 LTR MaLR 0 457 4 2318 230 118 12 chr5 157055349 157056011 -42574139 - MLT1K-int LTR MaLR 0 1735 1011 190 217 84 36 chr5 157056198 157056281 -42573869 + L2 LINE L2 2888 2974 -340 4949 165 52 47 chr5 157056384 157057671 -42572479 + Ricksha_b DNA DNA 9 1654 -13 446 295 54 0 chr5 157057753 157057882 -42572268 + L2 LINE L2 3136 3271 -1 4314 179 101 13 chr5 157058875 157059862 -42570288 - Tigger6a DNA MER2_type -1 1082 9 357 149 0 93 chr5 157059862 157059969 -42570181 - MSTD LTR MaLR 0 396 300 308 286 253 46 chr5 157061005 157061567 -42568583 + L2 LINE L2 1787 2464 -850 300 378 20 27 chr5 157061657 157061805 -42568345 + L2 LINE L2 3119 3265 -7 481 343 155 10 chr5 157062400 157062697 -42567453 - L3 LINE CR1 -7 1570 1231 271 311 40 0 chr5 157062786 157062860 -42567290 + L2 LINE L2 3193 3269 -3 1497 259 43 16 chr5 157062931 157063563 -42566587 + L1ME3 LINE L1 5291 5939 -223 411 257 73 39 chr5 157064034 157064213 -42565937 + MLT1L LTR MaLR 207 391 -224 390 398 19 9 chr5 157064425 157064641 -42565509 - L3 LINE CR1 -448 1129 912 2281 101 7 0 chr5 157066856 157067152 -42562998 + AluSx SINE Alu 1 298 -14 1401 167 4 0 chr5 157067537 157067764 -42562386 - AluJb SINE Alu -18 294 67 2613 225 107 52 chr5 157067907 157068796 -42561354 - MSTB2-int LTR MaLR -709 942 5 2641 154 25 5 chr5 157068800 157069248 -42560902 - MSTB2 LTR MaLR 0 457 1 3430 238 68 48 chr5 157069249 157069831 -42560319 - L1MEc LINE L1 -461 5774 5205 2683 175 4 0 chr5 157069831 157070294 -42559856 - L1PB4 LINE L1 -7 6149 5685 3430 238 68 48 chr5 157070294 157071933 -42558217 - L1MEc LINE L1 -1030 5205 1922 182 273 0 0 chr5 157071943 157071987 -42558163 + L2 LINE L2 3270 3313 0 534 225 63 94 chr5 157072170 157072525 -42557625 - MLT1K LTR MaLR -6 582 190 196 299 224 0 chr5 157072710 157072817 -42557333 + MIR3 SINE MIR 58 188 -20 345 254 81 34 chr5 157072817 157073026 -42557124 + L1ME3A LINE L1 5729 5947 -223 814 182 216 4 chr5 157073378 157073609 -42556541 - MLT1F1 LTR MaLR -275 292 13 2592 140 18 24 chr5 157073656 157074114 -42556036 - L1MC1 LINE L1 -9 6324 5870 334 220 132 0 chr5 157074213 157074304 -42555846 - MIR SINE MIR -159 103 1 180 296 91 79 chr5 157074320 157074573 -42555577 - L2 LINE L2 -131 3182 2927 442 243 42 28 chr5 157076036 157076180 -42553970 - MIR SINE MIR 0 262 117 543 145 0 0 chr5 157076271 157076354 -42553796 - AluJb SINE Alu -229 83 1 249 333 32 11 chr5 157076683 157076776 -42553374 + L2 LINE L2 2725 2819 -495 47 67 0 0 chr5 157076818 157076907 -42553243 + AT_rich Low_complexity Low_complexity 1 89 0 450 152 179 9 chr5 157076959 157077043 -42553107 + MER44D DNA MER2_type 12 80 -2411 195 42 0 0 chr5 157077043 157077067 -42553083 + (GA)n Simple_repeat Simple_repeat 1 24 0 450 152 179 9 chr5 157077067 157077094 -42553056 + MER44D DNA MER2_type 80 412 -197 733 110 25 17 chr5 157077101 157077219 -42552931 - FLAM_C SINE Alu -14 129 11 1052 157 5 0 chr5 157077221 157077406 -42552744 + MER44D DNA MER2_type 417 602 -3 3250 174 33 14 chr5 157077488 157078188 -42551962 - L1MC3 LINE L1 -2 7783 7071 237 328 0 0 chr5 157078289 157078350 -42551800 + MIR3 SINE MIR 129 189 -19 1817 122 45 28 chr5 157078371 157078657 -42551493 - AluSx SINE Alu -21 291 1 2363 168 44 0 chr5 157078831 157079241 -42550909 + MSTB1 LTR MaLR 5 432 0 241 85 0 43 chr5 157080402 157080449 -42549701 + (TTTTC)n Simple_repeat Simple_repeat 1 45 0 372 277 155 13 chr5 157081124 157081279 -42548871 + MIR3 SINE MIR 30 206 -2 1170 170 45 17 chr5 157081699 157081987 -42548163 + MER33 DNA MER1_type 5 300 -24 273 351 152 25 chr5 157082655 157083051 -42547099 + L2 LINE L2 2827 3272 0 233 302 191 16 chr5 157083649 157083775 -42546375 + L2 LINE L2 3164 3311 -2 1871 130 15 0 chr5 157083841 157084111 -42546039 + AluSx SINE Alu 23 296 -16 427 252 224 14 chr5 157085000 157085147 -42545003 + MIR SINE MIR 66 243 -19 738 196 189 53 chr5 157085300 157085376 -42544774 - MSTD LTR MaLR 0 396 332 2179 121 0 0 chr5 157085376 157085665 -42544485 + AluSg SINE Alu 1 289 -21 738 196 189 53 chr5 157085665 157085852 -42544298 - MSTD LTR MaLR -64 332 97 2231 115 28 20 chr5 157085852 157086208 -42543942 - THE1B LTR MaLR 0 364 6 419 233 0 0 chr5 157086211 157086297 -42543853 - MSTD LTR MaLR -324 104 19 21 0 0 0 chr5 157086508 157086529 -42543621 + AT_rich Low_complexity Low_complexity 1 21 0 210 267 33 0 chr5 157086594 157086654 -42543496 + GA-rich Low_complexity Low_complexity 3 64 0 397 242 45 45 chr5 157087213 157087345 -42542805 + MER5A DNA MER1_type 53 184 -5 240 125 0 50 chr5 157087540 157087580 -42542570 - L2 LINE L2 -8 3264 3227 1120 174 9 5 chr5 157087660 157087872 -42542278 + Tigger4(Zombi) DNA MER2_type 1 213 -2518 1161 91 32 5 chr5 157087872 157088058 -42542092 + Tigger4(Zombi) DNA MER2_type 1963 2153 -578 461 47 16 0 chr5 157088636 157088700 -42541450 + (TCTA)n Simple_repeat Simple_repeat 1 65 0 503 276 231 5 chr5 157088728 157088931 -42541219 - MIR SINE MIR -12 250 2 339 303 148 16 chr5 157089292 157089550 -42540600 - L1MC4a LINE L1 -1906 5902 5611 406 292 104 0 chr5 157089633 157089777 -42540373 + MIR SINE MIR 2 160 -102 * 894 210 125 9 chr5 157089761 157089985 -42540165 - MIR SINE MIR 0 262 13 508 271 0 0 chr5 157090569 157090691 -42539459 - MIR SINE MIR -51 211 90 598 264 88 19 chr5 157090750 157090966 -42539184 + MIR SINE MIR 21 251 -11 2306 105 0 0 chr5 157091373 157091668 -42538482 - AluSx SINE Alu -17 295 1 527 278 12 18 chr5 157091707 157091876 -42538274 - MIR SINE MIR 0 262 95 247 267 97 36 chr5 157092723 157092888 -42537262 + L2 LINE L2 2887 3061 -252 444 147 0 0 chr5 157092906 157092981 -42537169 + Ricksha DNA DNA 9 83 -1963 402 290 195 10 chr5 157093084 157093284 -42536866 - MIR SINE MIR -19 243 7 277 295 13 13 chr5 157094557 157094635 -42535515 + L2 LINE L2 3192 3269 -3 2111 97 17 37 chr5 157094679 157094979 -42535171 + AluSg SINE Alu 9 302 -8 403 261 124 25 chr5 157095209 157095450 -42534700 - L1ME3A LINE L1 -222 5948 5684 252 328 85 42 chr5 157095618 157095807 -42534343 + MIR SINE MIR 2 198 -64 278 275 66 0 chr5 157096251 157096342 -42533808 + MIR SINE MIR 112 208 -54 1875 141 42 0 chr5 157096835 157097119 -42533031 - AluSx SINE Alu -16 296 1 824 239 53 61 chr5 157097509 157097773 -42532377 + MIR SINE MIR 1 262 0 4559 168 26 17 chr5 157099009 157100296 -42529854 - L1MB8 LINE L1 -1 6177 4883 395 323 91 52 chr5 157100641 157100948 -42529202 + L2 LINE L2 2930 3248 -24 642 200 30 7 chr5 157100982 157101117 -42529033 + MIR SINE MIR 101 238 -24 191 288 68 0 chr5 157101085 157101144 -42529006 + L2 LINE L2 3251 3313 0 * 598 276 141 0 chr5 157101454 157101653 -42528497 + MIR SINE MIR 4 230 -32 297 0 0 0 chr5 157101892 157101925 -42528225 + (CA)n Simple_repeat Simple_repeat 2 34 0 234 188 0 59 chr5 157102138 157102223 -42527927 + CT-rich Low_complexity Low_complexity 1 80 0 184 355 157 0 chr5 157102967 157103088 -42527062 - MER5A DNA MER1_type -3 186 47 230 277 43 0 chr5 157103115 157103209 -42526941 + L2 LINE L2 3160 3257 -56 259 268 0 42 chr5 157103291 157103362 -42526788 - MER5A DNA MER1_type -83 106 39 472 277 214 0 chr5 157103394 157103600 -42526550 + MIR SINE MIR 13 262 0 487 311 116 9 chr5 157103664 157103889 -42526261 + MIR SINE MIR 14 262 0 316 284 42 0 chr5 157104049 157104144 -42526006 + MIR SINE MIR 57 155 -107 4658 98 3 23 chr5 157104269 157105011 -42525139 - L1PA14 LINE L1 -1 6160 5434 5933 138 17 0 chr5 157105241 157106866 -42523284 - L1PA3 LINE L1 -322 5833 4185 60 80 0 0 chr5 157106866 157107003 -42523147 + AT_rich Low_complexity Low_complexity 1 137 0 2064 186 19 67 chr5 157107003 157107525 -42522625 - L1MB3 LINE L1 -15 6168 5672 269 190 17 35 chr5 157107691 157107749 -42522401 - L2 LINE L2 -25 3247 3191 655 237 20 86 chr5 157108249 157108494 -42521656 + MIR SINE MIR 9 237 -25 483 343 42 36 chr5 157108531 157108887 -42521263 + L2 LINE L2 2855 3212 -60 946 263 49 4 chr5 157109469 157109712 -42520438 - MIR SINE MIR -1 261 8 291 28 0 0 chr5 157110206 157110242 -42519908 + (TG)n Simple_repeat Simple_repeat 1 36 0 435 257 40 0 chr5 157110482 157110583 -42519567 - L2 LINE L2 -1 3312 3208 274 268 31 0 chr5 157111192 157111289 -42518861 + MER117 DNA MER1_type 1 100 -97 262 289 111 71 chr5 157111365 157111590 -42518560 + L3 LINE CR1 736 969 -608 320 109 0 18 chr5 157112246 157112301 -42517849 + (ATG)n Simple_repeat Simple_repeat 2 55 0 1890 119 11 7 chr5 157113747 157114024 -42516126 + AluSx SINE Alu 1 278 -34 303 85 0 0 chr5 157114029 157114076 -42516074 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 1695 79 0 0 chr5 157114507 157114734 -42515416 + L1PA12 LINE L1 5942 6168 0 561 69 0 49 chr5 157114765 157114867 -42515283 - L1PA15 LINE L1 0 6165 6069 313 176 0 81 chr5 157115053 157115127 -42515023 - L2 LINE L2 0 3313 3246 1325 249 110 55 chr5 157115158 157115720 -42514430 - MLT1G1 LTR MaLR -2 593 1 363 23 0 0 chr5 157116213 157116257 -42513893 + (CA)n Simple_repeat Simple_repeat 1 44 0 255 241 241 17 chr5 157116558 157116799 -42513351 + L1MC/D LINE L1 5298 5592 -2216 23 86 0 0 chr5 157116901 157116959 -42513191 + AT_rich Low_complexity Low_complexity 1 58 0 23 33 0 0 chr5 157117922 157117952 -42512198 + AT_rich Low_complexity Low_complexity 1 30 0 2420 60 3 0 chr5 157118178 157118477 -42511673 + AluY SINE Alu 1 300 -11 4197 84 31 10 chr5 157118699 157119303 -42510847 - L1PA10 LINE L1 0 6168 5552 229 311 64 11 chr5 157119426 157119736 -42510414 + L1MC/D LINE L1 5577 5901 -469 382 141 77 0 chr5 157120837 157120915 -42509235 + MER103 DNA DNA 8 91 -75 2260 170 111 19 chr5 157121102 157121578 -42508572 + MLT2B1 LTR ERVL 1 520 0 246 310 19 30 chr5 157122428 157122600 -42507550 + MIR SINE MIR 15 249 -13 251 122 20 0 chr5 157122610 157122659 -42507491 + (CAT)n Simple_repeat Simple_repeat 2 51 0 278 336 75 5 chr5 157122835 157122978 -42507172 + MIR SINE MIR 2 150 -63 1568 205 58 0 chr5 157122979 157123272 -42506878 + AluJo SINE Alu 1 310 -2 256 222 47 0 chr5 157124076 157124166 -42505984 + L1MC/D LINE L1 5700 5795 -447 306 237 41 41 chr5 157124289 157124386 -42505764 - MIR SINE MIR 0 262 166 2083 116 3 0 chr5 157125529 157125814 -42504336 - AluSx SINE Alu -25 287 2 596 319 26 47 chr5 157125814 157126180 -42503970 + L1ME2 LINE L1 3441 3788 -2358 1631 132 0 8 chr5 157126180 157126415 -42503735 - AluSg/x SINE Alu -12 300 68 596 319 26 47 chr5 157126415 157126728 -42503422 + L1ME2 LINE L1 3788 4106 -2040 782 324 20 22 chr5 157126853 157127239 -42502911 + MLT1I LTR MaLR 55 409 0 278 306 0 8 chr5 157127239 157127363 -42502787 + L1ME2 LINE L1 4181 4303 -1843 838 325 93 62 chr5 157127377 157128249 -42501901 + L1ME2 LINE L1 4330 5228 -918 706 317 26 50 chr5 157128297 157128922 -42501228 + L1ME2 LINE L1 5281 5890 -274 391 248 15 152 chr5 157129598 157129933 -42500217 + L1ME2 LINE L1 5602 5890 -274 680 322 50 4 chr5 157130146 157130385 -42499765 - MIR SINE MIR 0 262 13 426 20 0 0 chr5 157130716 157130767 -42499383 + (TG)n Simple_repeat Simple_repeat 2 52 0 232 149 0 0 chr5 157130794 157130841 -42499309 - U7 snRNA snRNA -15 48 2 183 255 33 98 chr5 157132278 157132431 -42497719 + L2 LINE L2 2918 3060 -212 24 0 0 0 chr5 157132566 157132590 -42497560 + AT_rich Low_complexity Low_complexity 1 24 0 967 303 65 48 chr5 157132620 157133090 -42497060 - L1M4 LINE L1 -1819 4327 3867 1897 117 94 23 chr5 157133090 157133440 -42496710 - THE1C LTR MaLR 0 375 1 967 303 65 48 chr5 157133440 157133613 -42496537 - L1M4 LINE L1 -2279 3867 3698 1986 124 0 4 chr5 157133613 157133888 -42496262 - AluSx SINE Alu -6 306 33 967 303 65 48 chr5 157133888 157134231 -42495919 - L1M4 LINE L1 -2448 3698 3323 2411 237 72 24 chr5 157134248 157135049 -42495101 - L1ME1 LINE L1 -14 6152 5313 1090 107 23 0 chr5 157135113 157135290 -42494860 - HSMAR2 DNA Mariner -1 1301 1121 891 170 0 0 chr5 157135290 157135425 -42494725 - FLAM_C SINE Alu -8 135 1 2970 105 11 10 chr5 157135430 157135949 -42494201 - HSMAR2 DNA Mariner -173 1129 570 1383 99 0 5 chr5 157135947 157136160 -42493990 - HSMAR2 DNA Mariner -1086 216 5 * 2149 134 0 0 chr5 157136203 157136508 -42493642 - AluSq SINE Alu -8 305 1 4898 153 21 8 chr5 157136824 157137756 -42492394 - L1MA9 LINE L1 -23 6289 5345 2260 97 0 0 chr5 157137758 157138048 -42492102 - AluSg SINE Alu -20 290 1 473 252 86 53 chr5 157138291 157138974 -42491176 - L1MEd LINE L1 -4886 1233 606 366 304 85 89 chr5 157139057 157139494 -42490656 - L1MEd LINE L1 -5581 538 104 195 167 0 0 chr5 157139495 157139537 -42490613 + (TG)n Simple_repeat Simple_repeat 1 42 0 972 282 161 15 chr5 157139683 157140203 -42489947 + L2 LINE L2 2712 3309 -4 268 255 133 10 chr5 157141637 157141735 -42488415 - L2 LINE L2 -5 3308 3199 517 303 56 7 chr5 157142302 157142444 -42487706 - L2 LINE L2 -1 3271 3123 346 275 30 30 chr5 157142611 157142746 -42487404 + MIR SINE MIR 45 183 -57 199 306 47 24 chr5 157143058 157143143 -42487007 + L2 LINE L2 3186 3272 0 359 279 14 13 chr5 157143691 157143837 -42486313 + L1M4 LINE L1 5687 5832 -310 2629 32 3 0 chr5 157144084 157144392 -42485758 + AluYa5 SINE Alu 1 309 -2 205 250 0 33 chr5 157145390 157145450 -42484700 + (CATA)n Simple_repeat Simple_repeat 2 59 0 411 339 38 51 chr5 157145452 157145765 -42484385 - L2 LINE L2 0 3313 3005 183 367 38 13 chr5 157145863 157146021 -42484129 - L2 LINE L2 -362 2952 2791 187 369 48 0 chr5 157147854 157147938 -42482212 + L2 LINE L2 2487 2574 -740 649 230 0 43 chr5 157148082 157148243 -42481907 - L2 LINE L2 0 3313 3160 341 290 38 0 chr5 157148278 157148409 -42481741 + L2 LINE L2 2662 2797 -517 308 326 109 7 chr5 157148662 157148809 -42481341 + MIR SINE MIR 91 252 -10 791 205 148 14 chr5 157149532 157149742 -42480408 + MIR SINE MIR 15 252 -10 182 189 0 0 chr5 157149849 157149886 -42480264 + L2 LINE L2 3275 3311 -2 769 279 18 14 chr5 157151034 157151256 -42478894 + MIR SINE MIR 40 262 0 299 304 71 6 chr5 157151364 157151532 -42478618 - L1ME3A LINE L1 -5 6165 5987 2500 221 75 41 chr5 157151584 157152789 -42477361 - L1ME3 LINE L1 -90 6072 4831 2198 129 3 0 chr5 157152851 157153145 -42477005 + AluSx SINE Alu 1 295 -17 761 239 32 32 chr5 157153577 157153765 -42476385 - MER117 DNA MER1_type -5 192 5 186 43 0 0 chr5 157153921 157153944 -42476206 + (GCTG)n Simple_repeat Simple_repeat 1 23 0 438 279 162 40 chr5 157154246 157154468 -42475682 + MIR SINE MIR 12 260 -2 2085 141 0 3 chr5 157154556 157154868 -42475282 - AluY SINE Alu 0 311 1 451 280 100 67 chr5 157155278 157155517 -42474633 - MIR SINE MIR -14 248 2 755 152 45 0 chr5 157155700 157155832 -42474318 - MER5A DNA MER1_type 0 189 52 302 245 0 82 chr5 157155832 157155930 -42474220 - L1MC4 LINE L1 -1339 6703 6614 405 206 0 0 chr5 157155936 157156043 -42474107 + (TA)n Simple_repeat Simple_repeat 1 107 0 2747 95 41 8 chr5 157156060 157156451 -42473699 - MLT2A1 LTR ERVL -40 404 1 317 136 0 0 chr5 157156451 157156495 -42473655 - MER5A DNA MER1_type -145 44 1 299 197 45 15 chr5 157157528 157157594 -42472556 - L2 LINE L2 -17 3255 3188 202 275 200 0 chr5 157157606 157157686 -42472464 + MIR SINE MIR 48 143 -119 246 316 13 0 chr5 157157807 157157883 -42472267 + L2 LINE L2 3236 3312 -1 503 261 59 80 chr5 157158774 157159012 -42471138 - MER102a DNA MER1_type -14 316 84 374 264 11 11 chr5 157159222 157159313 -42470837 + MIR SINE MIR 2 92 -170 238 222 28 42 chr5 157159348 157159420 -42470730 - L2 LINE L2 -12 3301 3231 444 314 33 0 chr5 157160155 157160308 -42469842 + MIR SINE MIR 102 259 -3 223 303 0 15 chr5 157160468 157160534 -42469616 + (CACCAT)n Simple_repeat Simple_repeat 1 65 0 473 307 40 35 chr5 157160546 157160774 -42469376 - MIR SINE MIR -14 248 20 753 250 75 25 chr5 157161680 157161880 -42468270 + MIR SINE MIR 32 241 -21 2044 257 104 35 chr5 157161925 157163062 -42467088 + L2 LINE L2 2119 3312 -1 236 275 38 25 chr5 157163098 157163178 -42466972 + MIR3 SINE MIR 125 205 -3 957 237 120 56 chr5 157163381 157163849 -42466301 + LTR33 LTR ERVL 6 503 -18 1970 164 6 3 chr5 157163923 157164234 -42465916 + AluJo SINE Alu 1 312 0 186 133 0 0 chr5 157164854 157164884 -42465266 + (A)n Simple_repeat Simple_repeat 1 30 0 26 30 0 0 chr5 157165011 157165044 -42465106 + AT_rich Low_complexity Low_complexity 1 33 0 186 43 0 0 chr5 157165784 157165807 -42464343 + (TG)n Simple_repeat Simple_repeat 2 24 0 634 82 0 8 chr5 157165873 157166107 -42464043 + AluSg SINE Alu 1 309 0 437 250 108 37 chr5 157166232 157166690 -42463460 + L1MC4a LINE L1 5079 5560 -747 500 231 17 8 chr5 157166806 157166906 -42463244 - MLT1E2 LTR MaLR -58 568 468 2260 95 57 31 chr5 157166906 157167255 -42462895 - THE1B LTR MaLR 0 364 7 1474 245 58 19 chr5 157167354 157167782 -42462368 - MLT1E2 LTR MaLR -179 447 3 198 328 0 0 chr5 157167889 157167947 -42462203 - MIR SINE MIR -198 64 7 2788 228 175 40 chr5 157168368 157169949 -42460201 - L2 LINE L2 -16 3297 1522 216 0 0 0 chr5 157170145 157170169 -42459981 + (T)n Simple_repeat Simple_repeat 1 24 0 238 250 51 98 chr5 157171533 157171769 -42458381 + MLT1L LTR MaLR 206 434 -158 6205 88 5 5 chr5 157171867 157172713 -42457437 - L1PB2 LINE L1 -5 6146 5301 365 73 0 0 chr5 157172779 157172836 -42457314 - L1PB2 LINE L1 -855 5296 5240 246 232 0 0 chr5 157172845 157172901 -42457249 + MLT1K LTR MaLR 517 572 -16 21 36 0 0 chr5 157172987 157173015 -42457135 + AT_rich Low_complexity Low_complexity 1 28 0 217 302 0 0 chr5 157173636 157173689 -42456461 + CT-rich Low_complexity Low_complexity 3 55 0 280 300 129 6 chr5 157174529 157174699 -42455451 - L2 LINE L2 -3 3310 3120 756 248 81 48 chr5 157174976 157175311 -42454839 + L1MC4a LINE L1 5566 5911 -1897 390 91 0 0 chr5 157175359 157175414 -42454736 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 916 100 16 4 chr5 157175644 157175790 -42454360 + L1PA13 LINE L1 5505 5648 -515 1333 119 14 6 chr5 157175792 157176085 -42454065 + THE1C LTR MaLR 1 375 0 3910 99 2 0 chr5 157176085 157176598 -42453552 + L1PA13 LINE L1 5646 6159 -4 482 315 56 5 chr5 157177114 157177311 -42452839 + MIR SINE MIR 28 234 -28 2171 96 7 0 chr5 157177615 157177897 -42452253 - AluSx SINE Alu -16 296 13 562 191 92 7 chr5 157177911 157178052 -42452098 - L1MA9 LINE L1 -1 6311 6159 243 0 0 0 chr5 157178151 157178178 -42451972 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1961 132 4 0 chr5 157178180 157178460 -42451690 - AluSx SINE Alu -31 281 1 2382 126 36 20 chr5 157178499 157178857 -42451293 - THE1B LTR MaLR 0 364 1 1996 123 7 7 chr5 157178981 157179320 -42450830 + AluSq SINE Alu 1 339 0 670 235 50 11 chr5 157179745 157179924 -42450226 + MIR SINE MIR 77 262 0 275 260 135 0 chr5 157179962 157180058 -42450092 - MIR SINE MIR -98 164 56 318 50 0 0 chr5 157180607 157180647 -42449503 + (A)n Simple_repeat Simple_repeat 1 40 0 471 299 101 45 chr5 157180792 157181080 -42449070 - L2 LINE L2 -2 3311 3008 190 281 18 0 chr5 157181159 157181216 -42448934 - L2 LINE L2 0 3313 3256 386 270 270 5 chr5 157182095 157182284 -42447866 + MIR SINE MIR 2 240 -22 870 238 0 24 chr5 157182527 157182695 -42447455 - FRAM SINE Alu -13 163 1 327 146 0 0 chr5 157183536 157183591 -42446559 + (TG)n Simple_repeat Simple_repeat 2 56 0 21 57 0 0 chr5 157184880 157184915 -42445235 + AT_rich Low_complexity Low_complexity 1 35 0 712 290 18 0 chr5 157184966 157185183 -42444967 - MIR SINE MIR -1 261 41 412 299 14 35 chr5 157185380 157185524 -42444626 + L2 LINE L2 3173 3313 0 448 250 41 33 chr5 157185683 157185924 -42444226 + MER41B LTR ERV1 54 430 -205 1053 249 20 4 chr5 157186343 157186596 -42443554 + MIR SINE MIR 3 259 -3 2178 130 3 9 chr5 157186703 157187025 -42443125 - L1MC1 LINE L1 -2 6331 6012 338 239 43 33 chr5 157187400 157187492 -42442658 + Charlie7 DNA MER1_type 1 93 -2519 240 197 156 16 chr5 157187519 157187641 -42442509 + Charlie7 DNA MER1_type 2443 2581 -31 24 67 0 0 chr5 157187777 157187822 -42442328 + AT_rich Low_complexity Low_complexity 1 45 0 363 231 44 22 chr5 157187824 157187915 -42442235 + L2 LINE L2 3180 3272 0 487 237 74 30 chr5 157188649 157188784 -42441366 - MER102a DNA MER1_type -189 141 1 193 367 0 0 chr5 157189585 157189664 -42440486 - MIR3 SINE MIR -40 168 90 200 275 87 0 chr5 157189747 157189816 -42440334 + MIR SINE MIR 118 192 -70 437 254 107 0 chr5 157190056 157190178 -42439972 + MIR SINE MIR 4 138 -124 550 296 8 0 chr5 157190840 157190972 -42439178 + L2 LINE L2 3139 3271 -1 2381 92 0 3 chr5 157191328 157191633 -42438517 + AluSg SINE Alu 1 304 -6 895 292 182 33 chr5 157191633 157192050 -42438100 - L2 LINE L2 -77 3236 2883 2144 92 10 30 chr5 157192050 157192354 -42437796 - AluSg SINE Alu -12 298 1 895 292 182 33 chr5 157192354 157192899 -42437251 - L2 LINE L2 -430 2883 2125 425 291 43 0 chr5 157193771 157193912 -42436238 + MIR SINE MIR 37 183 -79 472 314 90 9 chr5 157194347 157194691 -42435459 + L1MC4a LINE L1 5562 5933 -1875 216 0 0 0 chr5 157194962 157194986 -42435164 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2223 149 11 24 chr5 157195654 157196023 -42434127 + THE1B LTR MaLR 1 364 0 6801 172 6 4 chr5 157196160 157198533 -42431617 + L1PB1 LINE L1 3772 6151 0 390 275 57 78 chr5 157198724 157198968 -42431182 - L2 LINE L2 -1 3312 3074 313 341 65 8 chr5 157199170 157199293 -42430857 + L2 LINE L2 3143 3272 0 234 198 136 25 chr5 157199314 157199395 -42430755 - L1ME3A LINE L1 -30 6140 6051 1984 232 64 57 chr5 157199399 157199912 -42430238 - L1ME3A LINE L1 -529 5633 5125 2130 101 39 0 chr5 157199912 157200198 -42429952 - AluSc SINE Alu -12 297 1 1984 232 64 57 chr5 157200198 157200979 -42429171 - L1ME3A LINE L1 -1037 5125 4321 488 263 56 11 chr5 157201210 157201389 -42428761 + Charlie8 DNA MER1_type 32 218 -2199 2506 314 92 14 chr5 157201466 157202397 -42427753 + L2 LINE L2 1751 2806 -507 1501 213 57 25 chr5 157202397 157202750 -42427400 - MLT1A1 LTR MaLR 0 365 2 2506 314 92 14 chr5 157202750 157203098 -42427052 + L2 LINE L2 2806 3125 -188 544 113 21 43 chr5 157203098 157203239 -42426911 + CT-rich Low_complexity Low_complexity 1 138 0 1383 207 0 84 chr5 157203239 157203573 -42426577 - AluJb SINE Alu -6 306 1 322 336 55 0 chr5 157203641 157203769 -42426381 + L2 LINE L2 3179 3313 0 5187 94 8 0 chr5 157204268 157204982 -42425168 + L1PA10 LINE L1 5437 6156 -12 2224 116 0 3 chr5 157205010 157205311 -42424839 - AluSx SINE Alu -7 305 6 325 253 110 39 chr5 157206732 157206886 -42423264 - MIR SINE MIR -4 258 94 582 246 27 77 chr5 157207179 157207215 -42422935 - MER97c DNA MER1_type? -3 1087 1051 2223 98 10 0 chr5 157207215 157207510 -42422640 - AluSp SINE Alu -15 298 1 582 246 27 77 chr5 157207510 157207810 -42422340 - MER97c DNA MER1_type? -39 1051 768 1752 218 93 10 chr5 157208126 157208630 -42421520 - MER97a DNA MER1_type? -289 605 60 5083 101 5 23 chr5 157208869 157208979 -42421171 + L1PA13 LINE L1 5380 5490 -673 2861 6 0 0 chr5 157208979 157209290 -42420860 + AluY SINE Alu 1 311 0 5083 101 5 23 chr5 157209290 157209974 -42420176 + L1PA13 LINE L1 5490 6160 -3 3026 98 30 0 chr5 157209974 157210400 -42419750 + L1PA11 LINE L1 5734 6174 0 266 294 124 17 chr5 157210615 157210792 -42419358 - MER117 DNA MER1_type 0 197 2 2083 150 0 3 chr5 157211077 157211383 -42418767 - AluSx SINE Alu -7 305 1 257 218 13 64 chr5 157211880 157211958 -42418192 + MIR3 SINE MIR 93 166 -42 898 200 16 32 chr5 157211973 157212158 -42417992 + MIR SINE MIR 63 244 -18 450 136 0 0 chr5 157212599 157212680 -42417470 + (GA)n Simple_repeat Simple_repeat 2 82 0 1069 128 0 0 chr5 157212935 157213119 -42417031 + AluSg/x SINE Alu 136 319 0 776 285 72 17 chr5 157213818 157214053 -42416097 - MIR SINE MIR -8 254 7 1347 227 58 44 chr5 157214386 157214979 -42415171 - L2 LINE L2 0 3313 2701 458 289 73 15 chr5 157214991 157215264 -42414886 - L1MC4a LINE L1 -1907 5901 5613 7289 22 2 3 chr5 157215337 157216199 -42413951 + L1PA4 LINE L1 5292 6152 -3 313 271 23 54 chr5 157216215 157216344 -42413806 - L1MC4a LINE L1 -541 5580 5456 222 158 26 0 chr5 157217498 157217536 -42412614 + L2 LINE L2 3268 3306 -7 286 327 29 10 chr5 157218685 157218789 -42411361 + L2 LINE L2 2713 2818 -496 390 229 25 8 chr5 157218792 157218806 -42411344 - L1MA10 LINE L1 -1 6333 6320 1107 249 39 54 chr5 157218806 157219268 -42410882 - L1ME1 LINE L1 -9 6157 5703 271 177 16 0 chr5 157219317 157219379 -42410771 + MER113 DNA MER1_type? 150 212 -309 231 36 0 0 chr5 157219499 157219527 -42410623 + (CCCCAG)n Simple_repeat Simple_repeat 4 31 0 248 292 15 15 chr5 157219802 157219867 -42410283 - L2 LINE L2 -50 3222 3158 4233 166 109 20 chr5 157219989 157220844 -42409306 - MER21A LTR ERV1 0 931 1 723 276 62 52 chr5 157221409 157221830 -42408320 + MLT1L LTR MaLR 23 447 -168 960 307 169 25 chr5 157221930 157222533 -42407617 + L3 LINE CR1 787 1476 -101 196 354 91 47 chr5 157222555 157222809 -42407341 - L2 LINE L2 -16 3256 2992 409 210 14 0 chr5 157222866 157223009 -42407141 + GA-rich Low_complexity Low_complexity 3 147 0 2364 103 3 0 chr5 157223345 157223656 -42406494 + AluSp SINE Alu 1 312 -1 338 288 47 53 chr5 157223902 157224120 -42406030 + MIR SINE MIR 10 230 -32 370 238 191 18 chr5 157224237 157224405 -42405745 - L2 LINE L2 -4 3309 3113 396 313 182 0 chr5 157225715 157225907 -42404243 - MIR SINE MIR -30 232 6 3163 127 4 6 chr5 157226254 157226743 -42403407 - MER1A DNA MER1_type -41 488 1 1414 74 21 0 chr5 157227295 157227485 -42402665 - L1PA8 LINE L1 -2 6170 5977 338 388 0 8 chr5 157227800 157227929 -42402221 - L2 LINE L2 -1 3271 3144 287 361 82 34 chr5 157228008 157228277 -42401873 - L2 LINE L2 -454 2860 2579 2127 125 0 0 chr5 157228315 157228627 -42401523 - AluSx SINE Alu 0 312 1 292 344 125 48 chr5 157230094 157230533 -42399617 + L2 LINE L2 2451 2923 -391 212 323 31 10 chr5 157231225 157231321 -42398829 + L2 LINE L2 2935 3032 -240 514 274 147 0 chr5 157231334 157231491 -42398659 + MER5A DNA MER1_type 10 189 0 336 200 43 0 chr5 157231750 157231820 -42398330 + MLT1J LTR MaLR 109 181 -330 327 295 11 0 chr5 157233083 157233178 -42396972 - MARNA DNA Mariner -189 397 302 831 214 11 22 chr5 157233404 157233586 -42396564 - MER5A DNA MER1_type 0 189 10 183 283 0 19 chr5 157236890 157236943 -42393207 - MIR SINE MIR -1 261 210 2020 132 0 29 chr5 157237237 157237548 -42392602 + AluSx SINE Alu 1 302 -10 330 322 145 33 chr5 157238595 157238809 -42391341 + MIR SINE MIR 18 255 -7 273 325 15 98 chr5 157238966 157239169 -42390981 + MIR SINE MIR 26 211 -51 404 301 82 27 chr5 157239455 157239674 -42390476 + MIR SINE MIR 31 261 -1 189 316 42 74 chr5 157241934 157242029 -42388121 - L2 LINE L2 -9 3263 3172 593 262 109 97 chr5 157242267 157243068 -42387082 + L1ME4a LINE L1 4359 5168 -978 51 51 0 0 chr5 157243141 157243220 -42386930 + AT_rich Low_complexity Low_complexity 1 79 0 735 263 103 50 chr5 157243246 157243684 -42386466 + L1ME4a LINE L1 5315 5775 -2033 336 275 65 65 chr5 157243701 157243977 -42386173 + L1ME4a LINE L1 5843 6118 -3 31 20 0 20 chr5 157244256 157244275 -42385875 + AT_rich Low_complexity Low_complexity 1 19 -29 273 57 0 0 chr5 157244275 157244310 -42385840 + (CA)n Simple_repeat Simple_repeat 2 36 0 31 20 0 20 chr5 157244310 157244339 -42385811 + AT_rich Low_complexity Low_complexity 19 48 0 234 288 55 27 chr5 157245405 157245478 -42384672 + MIR3 SINE MIR 111 185 -23 807 148 13 41 chr5 157245707 157245888 -42384262 - MER58A DNA MER1_type 0 157 1 1682 183 17 0 chr5 157246302 157246592 -42383558 - AluJb SINE Alu -10 302 8 292 259 19 37 chr5 157246649 157246811 -42383339 + L1MC5 LINE L1 7625 7783 -178 241 260 20 0 chr5 157247834 157247900 -42382250 - MIR SINE MIR -93 115 45 720 210 35 0 chr5 157247907 157248107 -42382043 + MER113 DNA MER1_type? 17 223 -298 267 200 25 38 chr5 157248477 157248557 -42381593 + (TA)n Simple_repeat Simple_repeat 1 79 0 246 345 155 11 chr5 157249021 157249195 -42380955 + MIR SINE MIR 29 227 -35 227 321 252 19 chr5 157249225 157249487 -42380663 - L2 LINE L2 -41 3272 2950 278 330 28 19 chr5 157250823 157250929 -42379221 + L2 LINE L2 3166 3272 0 2354 117 0 0 chr5 157251364 157251672 -42378478 - AluSg SINE Alu 0 310 3 586 219 28 59 chr5 157251871 157251885 -42378265 + MER58A DNA MER1_type 1 14 -2406 2568 123 101 0 chr5 157251885 157252292 -42377858 + MER83 LTR ERV1 1 448 0 586 219 28 59 chr5 157252292 157252577 -42377573 + MER58A DNA MER1_type 14 224 0 772 281 46 8 chr5 157252619 157252857 -42377293 - MIR SINE MIR -10 252 6 1418 188 40 3 chr5 157253355 157253653 -42376497 - L1MA10 LINE L1 -8 6326 6018 533 234 127 19 chr5 157253928 157254086 -42376064 + MIR SINE MIR 70 244 -18 280 315 130 6 chr5 157254399 157254561 -42375589 - MIR SINE MIR -71 191 10 704 255 31 0 chr5 157254934 157255095 -42375055 - MIR SINE MIR -18 244 79 389 167 0 12 chr5 157255495 157255579 -42374571 + (CA)n Simple_repeat Simple_repeat 1 83 0 2606 221 94 50 chr5 157255581 157256505 -42373645 - MER45B DNA AcHobo -38 1002 38 297 200 0 0 chr5 157256507 157256557 -42373593 - MER5A DNA MER1_type -139 50 1 181 260 60 0 chr5 157257841 157257891 -42372259 - MER5A DNA MER1_type -46 143 91 286 170 0 0 chr5 157258058 157258105 -42372045 + MLT1J2 LTR MaLR 278 324 -126 2408 151 54 5 chr5 157258257 157258662 -42371488 - MSTB LTR MaLR 0 426 2 223 315 27 18 chr5 157260014 157260125 -42370025 - L3 LINE CR1 -154 1423 1312 234 193 0 0 chr5 157260462 157260519 -42369631 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 442 333 53 0 chr5 157261851 157261983 -42368167 + L2 LINE L2 3134 3272 0 200 308 25 42 chr5 157262128 157262248 -42367902 + L2 LINE L2 2893 3010 -262 248 317 0 33 chr5 157266926 157267046 -42363104 + MER117 DNA MER1_type 1 116 -81 225 314 92 62 chr5 157267083 157267420 -42362730 + L2 LINE L2 2948 3294 -19 445 250 111 21 chr5 157267772 157267916 -42362234 + MIR SINE MIR 64 220 -42 1782 162 48 3 chr5 157268100 157268390 -42361760 - AluSx SINE Alu -9 303 1 622 318 49 14 chr5 157269005 157269228 -42360922 - MIR SINE MIR -6 256 26 2041 109 51 0 chr5 157269229 157269503 -42360647 - AluSg SINE Alu -18 292 5 282 308 55 0 chr5 157269715 157269806 -42360344 - L2 LINE L2 -17 3296 3201 1376 212 150 70 chr5 157271709 157271765 -42358385 + MER20B DNA MER1_type 1 51 -732 2404 80 0 3 chr5 157271765 157272064 -42358086 + AluY SINE Alu 1 298 -13 1376 212 150 70 chr5 157272064 157272490 -42357660 + MER20B DNA MER1_type 51 563 -220 2420 100 0 0 chr5 157272490 157272789 -42357361 - AluSg SINE Alu -11 299 1 1376 212 150 70 chr5 157272789 157273030 -42357120 + MER20B DNA MER1_type 563 783 0 477 277 154 21 chr5 157273575 157273763 -42356387 + MIR SINE MIR 20 232 -30 196 327 0 0 chr5 157273825 157273880 -42356270 - MIR3 SINE MIR -9 199 145 7578 25 3 0 chr5 157274004 157275368 -42354782 + L1PA3 LINE L1 4784 6152 -3 207 287 109 10 chr5 157276104 157276205 -42353945 + MIR SINE MIR 40 150 -112 1868 266 67 69 chr5 157276462 157278338 -42351812 - L1ME LINE L1 -4347 1914 5 590 277 27 64 chr5 157279672 157279968 -42350182 - L2 LINE L2 -44 3269 2985 2163 118 0 3 chr5 157280311 157280600 -42349550 + AluSx SINE Alu 1 288 -24 207 0 0 0 chr5 157280603 157280626 -42349524 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 216 67 0 0 chr5 157281173 157281203 -42348947 + (A)n Simple_repeat Simple_repeat 1 30 0 209 268 0 0 chr5 157281661 157281702 -42348448 + C-rich Low_complexity Low_complexity 5 45 0 296 260 219 32 chr5 157281702 157281921 -42348229 + MER102b DNA MER1_type 82 341 0 1056 233 0 0 chr5 157283493 157283703 -42346447 + MER58A DNA MER1_type 9 218 -6 2280 114 3 0 chr5 157283703 157284011 -42346139 + AluSq SINE Alu 3 311 -2 242 252 33 69 chr5 157285334 157285515 -42344635 - L2 LINE L2 -1 3312 3168 579 342 17 20 chr5 157285541 157285791 -42344359 + MIR SINE MIR 15 262 0 690 276 50 10 chr5 157285842 157286041 -42344109 + MIR SINE MIR 45 251 -11 394 206 0 22 chr5 157286971 157287085 -42343065 + MLT1K LTR MaLR 485 606 -9 249 269 103 0 chr5 157287822 157287900 -42342250 - MIR SINE MIR -57 205 120 225 0 0 0 chr5 157288818 157288843 -42341307 + (A)n Simple_repeat Simple_repeat 1 25 0 186 172 0 0 chr5 157289617 157289646 -42340504 + L2 LINE L2 3192 3220 -93 475 190 20 10 chr5 157289757 157289857 -42340293 + MER58 DNA MER1_type 2320 2420 0 191 333 0 0 chr5 157289857 157289905 -42340245 + L2 LINE L2 3187 3234 -38 389 243 216 0 chr5 157290237 157290348 -42339802 + MER5A DNA MER1_type 54 188 -1 4663 140 48 15 chr5 157290874 157291674 -42338476 - LTR1B LTR ERV1 0 826 1 361 283 116 35 chr5 157291731 157291904 -42338246 - MIR SINE MIR -74 188 2 1829 139 6 84 chr5 157292180 157292512 -42337638 - AluSx SINE Alu -4 308 3 247 258 15 0 chr5 157293525 157293591 -42336559 + MER103 DNA DNA 49 115 -51 347 376 73 18 chr5 157293628 157293793 -42336357 - MIR3 SINE MIR -22 186 13 252 305 72 24 chr5 157293888 157294022 -42336128 + MIR SINE MIR 27 158 -50 2103 129 36 12 chr5 157294242 157294576 -42335574 + MER2 DNA MER2_type 3 344 0 1580 219 131 9 chr5 157296191 157296625 -42333525 + MLT1E LTR MaLR 1 487 -106 499 168 0 11 chr5 157296907 157297002 -42333148 + MLT1E LTR MaLR 500 593 0 409 337 198 5 chr5 157298391 157298593 -42331557 + MIR SINE MIR 22 262 0 21 36 0 0 chr5 157298640 157298668 -42331482 + AT_rich Low_complexity Low_complexity 1 28 0 21 89 0 0 chr5 157298747 157298803 -42331347 + AT_rich Low_complexity Low_complexity 1 56 0 345 333 70 0 chr5 157299038 157299194 -42330956 - MIR SINE MIR -29 233 67 1447 133 205 0 chr5 157299347 157299596 -42330554 - AluJb SINE Alu -12 300 1 218 122 0 24 chr5 157299791 157299832 -42330318 + (TAAAAA)n Simple_repeat Simple_repeat 3 42 0 344 250 250 13 chr5 157300275 157300431 -42329719 + MIR SINE MIR 51 243 -19 608 259 40 73 chr5 157301771 157302018 -42328132 + MIR SINE MIR 8 246 -16 334 309 114 20 chr5 157302479 157302628 -42327522 + MIR SINE MIR 30 192 -70 1366 194 101 18 chr5 157302688 157303132 -42327018 - Charlie1b DNA MER1_type -5 518 38 453 297 0 8 chr5 157303584 157303712 -42326438 + MIR SINE MIR 21 147 -115 606 234 104 29 chr5 157303712 157304003 -42326147 + MLT1H LTR MaLR 1 355 -194 279 187 120 27 chr5 157304120 157304195 -42325955 - MER81 DNA DNA -32 82 1 2097 141 3 3 chr5 157305900 157306204 -42323946 - AluSx SINE Alu -8 304 1 2506 62 0 7 chr5 157306232 157306540 -42323610 + AluY SINE Alu 1 306 -5 660 295 100 50 chr5 157306708 157307023 -42323127 + L2 LINE L2 2585 2883 -430 1601 132 114 18 chr5 157307023 157307303 -42322847 + AluSg SINE Alu 1 307 -3 660 295 100 50 chr5 157307303 157307629 -42322521 + L2 LINE L2 2883 3272 -41 599 312 15 10 chr5 157307648 157307853 -42322297 - L2 LINE L2 -625 2689 2484 395 185 74 9 chr5 157308050 157308158 -42321992 - MER94 DNA DNA -19 115 1 8419 220 53 20 chr5 157308920 157312787 -42317363 - L1PA16 LINE L1 -9 6808 3069 2175 144 0 3 chr5 157312787 157313099 -42317051 - AluSx SINE Alu -1 311 1 8419 220 53 20 chr5 157313099 157313571 -42316579 - L1PA16 LINE L1 -3748 3069 2614 2178 102 0 33 chr5 157313571 157313876 -42316274 + AluY SINE Alu 1 295 -16 8419 220 53 20 chr5 157313876 157314095 -42316055 - L1PA16 LINE L1 -4203 2614 2404 1826 188 0 0 chr5 157314095 157314388 -42315762 - AluJb SINE Alu -14 298 6 2312 78 0 0 chr5 157314394 157314697 -42315453 - AluY SINE Alu 0 303 1 8419 220 53 20 chr5 157314697 157315176 -42314974 - L1PA16 LINE L1 -4417 2400 1623 955 277 7 11 chr5 157315229 157315514 -42314636 - L1PA16 LINE L1 -5181 1606 1323 387 0 0 0 chr5 157316365 157316408 -42313742 + (A)n Simple_repeat Simple_repeat 1 43 0 719 185 62 56 chr5 157318521 157318699 -42311451 - MER97c DNA MER1_type? -911 179 1 334 246 92 63 chr5 157319237 157319444 -42310706 - MLT1J2 LTR MaLR -237 213 1 1112 186 5 0 chr5 157320821 157321009 -42309141 - MER5A DNA MER1_type 0 189 1 226 130 22 22 chr5 157321678 157321724 -42308426 + Charlie8 DNA MER1_type 1355 1400 -1017 342 352 64 0 chr5 157321743 157321868 -42308282 - MIR SINE MIR -57 151 19 218 186 0 0 chr5 157322213 157322256 -42307894 + A-rich Low_complexity Low_complexity 3 45 0 279 333 113 24 chr5 157322472 157322640 -42307510 - MER5A DNA MER1_type 0 189 7 334 227 102 0 chr5 157322699 157322787 -42307363 - MER5A DNA MER1_type -89 100 4 321 318 28 0 chr5 157322812 157322919 -42307231 + MIR SINE MIR 35 144 -118 1883 148 7 16 chr5 157322963 157323268 -42306882 - AluSq SINE Alu -11 302 1 2300 111 3 0 chr5 157323879 157324176 -42305974 + AluSx SINE Alu 1 298 -14 224 323 166 11 chr5 157324304 157324499 -42305651 - MIR SINE MIR -8 254 31 753 217 54 6 chr5 157324525 157324691 -42305459 - MER5A DNA MER1_type 0 189 16 262 307 80 12 chr5 157326086 157326286 -42303864 + MIR SINE MIR 46 259 -3 6689 115 68 10 chr5 157326368 157327532 -42302618 - Tigger3b DNA MER2_type 0 1231 1 192 354 0 0 chr5 157328285 157328333 -42301817 + L2 LINE L2 3200 3247 -25 185 220 0 17 chr5 157328351 157328410 -42301740 + GA-rich Low_complexity Low_complexity 3 60 0 184 297 27 27 chr5 157329372 157329446 -42300704 + L2 LINE L2 3234 3307 -6 402 354 42 60 chr5 157330917 157331202 -42298948 + L2 LINE L2 2992 3271 -1 223 278 9 96 chr5 157331322 157331437 -42298713 - MIR SINE MIR -85 123 19 198 0 0 0 chr5 157331570 157331592 -42298558 + (TG)n Simple_repeat Simple_repeat 1 22 0 310 100 0 0 chr5 157331989 157332039 -42298111 - MADE1 DNA Mariner -30 50 1 883 280 86 17 chr5 157332524 157332945 -42297205 + LTR16A LTR ERVL 1 450 0 307 303 104 26 chr5 157333122 157333469 -42296681 - L1MC/D LINE L1 -1985 5823 5450 265 301 75 0 chr5 157334165 157334258 -42295892 + MIR SINE MIR 117 216 -46 34 0 0 0 chr5 157334272 157334306 -42295844 + AT_rich Low_complexity Low_complexity 1 34 0 559 192 26 51 chr5 157334397 157334553 -42295597 + MER46C DNA MER2_type 61 212 -126 23 0 0 0 chr5 157334797 157334820 -42295330 + AT_rich Low_complexity Low_complexity 1 23 0 215 130 0 43 chr5 157334995 157335041 -42295109 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 2356 77 0 3 chr5 157335256 157335556 -42294594 - AluY SINE Alu -12 299 1 551 257 47 35 chr5 157335917 157336088 -42294062 - Charlie8 DNA MER1_type -2236 181 9 296 330 53 0 chr5 157336651 157336745 -42293405 - L2 LINE L2 0 3313 3215 216 0 0 0 chr5 157337683 157337707 -42292443 + (T)n Simple_repeat Simple_repeat 1 24 0 412 348 32 19 chr5 157338050 157338205 -42291945 - L2 LINE L2 0 3272 3116 231 268 0 0 chr5 157338237 157338293 -42291857 + L2 LINE L2 3001 3056 -216 278 301 106 25 chr5 157338344 157338543 -42291607 + MLT1H1 LTR MaLR 341 555 0 254 270 234 18 chr5 157340569 157340680 -42289470 - L2 LINE L2 -10 3303 3169 363 246 152 52 chr5 157340840 157341031 -42289119 + MIR SINE MIR 47 256 -6 2167 102 0 0 chr5 157341337 157341645 -42288505 + AluSg SINE Alu 1 308 0 2181 125 3 3 chr5 157342908 157343204 -42286946 + AluSx SINE Alu 1 296 -16 207 0 0 0 chr5 157343208 157343231 -42286919 + (T)n Simple_repeat Simple_repeat 1 23 0 180 0 0 0 chr5 157343498 157343518 -42286632 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 2212 108 0 7 chr5 157344189 157344485 -42285665 - AluSx SINE Alu -15 297 4 192 339 136 17 chr5 157344881 157344999 -42285151 - L2 LINE L2 -8 3264 3133 373 288 38 30 chr5 157345088 157345220 -42284930 + MIR SINE MIR 63 195 -67 762 202 146 68 chr5 157345394 157345803 -42284347 - LTR50 LTR ERVL -3 792 261 249 57 0 0 chr5 157346925 157346960 -42283190 + (TG)n Simple_repeat Simple_repeat 2 36 0 704 286 103 0 chr5 157347661 157347895 -42282255 - MIR SINE MIR -3 259 2 245 351 45 30 chr5 157348081 157348215 -42281935 + L2 LINE L2 3136 3271 -1 2021 201 159 18 chr5 157348225 157348722 -42281428 - MLT1F1 LTR MaLR 0 567 1 1957 207 43 22 chr5 157349710 157350198 -42279952 - MLT1D LTR MaLR 0 505 8 432 0 0 0 chr5 157350330 157350378 -42279772 + (CAT)n Simple_repeat Simple_repeat 3 50 0 22 35 0 0 chr5 157350830 157350859 -42279291 + AT_rich Low_complexity Low_complexity 1 29 0 480 312 107 9 chr5 157350981 157351196 -42278954 + MIR SINE MIR 20 255 -7 2273 130 30 14 chr5 157351802 157352171 -42277979 - THE1C LTR MaLR 0 375 1 27 29 0 0 chr5 157352466 157352500 -42277650 + AT_rich Low_complexity Low_complexity 1 34 0 348 248 23 138 chr5 157353451 157353669 -42276481 - HAL1b LINE L1 -530 818 626 430 303 62 33 chr5 157353852 157354063 -42276087 - HAL1b LINE L1 -969 379 163 1319 132 50 5 chr5 157355030 157355250 -42274900 - MER30 DNA MER1_type 0 230 1 767 314 62 20 chr5 157355974 157356572 -42273578 + L1ME3 LINE L1 5267 5889 -273 24 0 0 0 chr5 157357204 157357228 -42272922 + AT_rich Low_complexity Low_complexity 1 24 0 2411 136 47 20 chr5 157357469 157357917 -42272233 - MER65C LTR ERV1 0 461 2 750 11 0 0 chr5 157359481 157359626 -42270524 + L1PA2 LINE L1 6045 6189 0 293 316 86 0 chr5 157359785 157359902 -42270248 - MIR3 SINE MIR -50 158 32 823 251 75 5 chr5 157359981 157360180 -42269970 - MIR SINE MIR -22 240 28 187 325 60 12 chr5 157360188 157360271 -42269879 - MIR3 SINE MIR -11 197 111 2240 126 19 39 chr5 157360476 157360890 -42269260 - MSTA LTR MaLR 0 428 23 364 279 114 58 chr5 157361764 157362072 -42268078 + MER102b DNA MER1_type 17 341 0 562 277 34 7 chr5 157362937 157363085 -42267065 + MIR3 SINE MIR 42 193 -15 1596 176 10 36 chr5 157363492 157363794 -42266356 + AluJo SINE Alu 1 294 -18 2071 99 38 3 chr5 157364239 157364531 -42265619 + AluSg SINE Alu 1 302 -8 388 169 0 0 chr5 157364873 157364944 -42265206 - MLT2B1 LTR ERVL 0 520 450 694 132 97 0 chr5 157364948 157365070 -42265080 - L1MA4 LINE L1 -3 6297 6158 351 0 0 0 chr5 157365070 157365109 -42265041 + (TG)n Simple_repeat Simple_repeat 2 40 0 694 132 97 0 chr5 157365109 157365130 -42265020 - L1MA4 LINE L1 -142 6158 6140 1585 142 17 54 chr5 157365151 157365447 -42264703 - MER1B DNA MER1_type 0 339 55 864 122 14 0 chr5 157365447 157365594 -42264556 - MLT2B1 LTR ERVL -371 149 1 388 307 53 0 chr5 157365807 157365921 -42264229 + MIR SINE MIR 25 144 -64 22 0 0 0 chr5 157365937 157365959 -42264191 + AT_rich Low_complexity Low_complexity 1 22 0 2018 115 6 45 chr5 157366297 157366467 -42263683 - AluSg SINE Alu -8 302 148 2276 78 10 19 chr5 157366467 157366774 -42263376 - AluY SINE Alu -7 304 1 2018 115 6 45 chr5 157366774 157366917 -42263233 - AluSg SINE Alu -162 148 1 3650 91 0 0 chr5 157367066 157367570 -42262580 + L1PA13 LINE L1 5659 6162 -1 211 290 50 20 chr5 157367903 157368003 -42262147 - L2 LINE L2 -588 2726 2624 361 249 58 40 chr5 157368068 157368241 -42261909 + MLT1J2 LTR MaLR 20 195 -251 414 281 94 0 chr5 157368257 157368417 -42261733 + MLT1J1 LTR MaLR 270 444 -2 2401 78 7 7 chr5 157368644 157368953 -42261197 - AluSq SINE Alu -4 309 1 344 317 110 6 chr5 157369027 157369191 -42260959 - L2 LINE L2 0 3313 3133 607 259 50 35 chr5 157369236 157369437 -42260713 - MIR SINE MIR -3 259 56 389 66 16 0 chr5 157369441 157369502 -42260648 + (TG)n Simple_repeat Simple_repeat 2 63 0 2039 196 31 41 chr5 157370374 157370883 -42259267 + MLT1D LTR MaLR 1 504 -1 642 203 66 41 chr5 157371597 157371839 -42258311 - MER113 DNA MER1_type? 0 521 274 627 227 13 0 chr5 157371842 157371996 -42258154 - L1MA10 LINE L1 -3 6331 6176 5641 220 69 15 chr5 157372020 157374363 -42255787 - L1ME1 LINE L1 -166 6000 3550 644 249 22 39 chr5 157374364 157374593 -42255557 - LTR9 LTR ERV1 0 612 388 744 101 0 76 chr5 157374593 157374712 -42255438 + AluSg/x SINE Alu 164 273 -39 450 36 0 0 chr5 157374712 157374768 -42255382 + (TC)n Simple_repeat Simple_repeat 2 57 0 345 270 22 0 chr5 157374772 157374861 -42255289 - L1MC4 LINE L1 -1339 6703 6613 597 174 42 26 chr5 157374950 157375140 -42255010 - MER113 DNA MER1_type? -323 198 6 313 284 0 0 chr5 157375829 157375903 -42254247 + L2 LINE L2 3185 3258 -14 202 197 45 0 chr5 157375905 157375971 -42254179 + GA-rich Low_complexity Low_complexity 4 72 0 282 254 144 51 chr5 157375993 157376111 -42254039 + L2 LINE L2 3185 3313 0 306 227 36 64 chr5 157376240 157376350 -42253800 - L2 LINE L2 -197 3075 2969 606 301 134 75 chr5 157376881 157377342 -42252808 + L2 LINE L2 2776 3271 -1 2544 49 0 19 chr5 157377471 157377778 -42252372 - AluY SINE Alu -10 301 1 595 322 28 0 chr5 157378541 157378721 -42251429 + MIR SINE MIR 28 212 -50 475 291 61 0 chr5 157378904 157379052 -42251098 + MIR SINE MIR 40 196 -66 190 421 21 0 chr5 157379148 157379243 -42250907 - MER5B DNA MER1_type -81 97 1 207 0 0 0 chr5 157380373 157380396 -42249754 + (T)n Simple_repeat Simple_repeat 1 23 0 498 366 22 0 chr5 157380815 157381039 -42249111 - MIR SINE MIR -28 234 6 414 204 0 0 chr5 157381272 157381360 -42248790 + (TCCA)n Simple_repeat Simple_repeat 3 90 0 698 202 0 0 chr5 157381406 157381525 -42248625 + FLAM_C SINE Alu 2 120 -13 497 310 12 112 chr5 157381554 157381812 -42248338 - L2 LINE L2 -43 3229 2998 327 304 0 0 chr5 157381821 157381913 -42248237 - MIR SINE MIR -3 259 168 581 308 123 13 chr5 157382013 157382321 -42247829 - L2 LINE L2 -431 2883 2542 287 277 0 0 chr5 157383689 157383754 -42246396 + CT-rich Low_complexity Low_complexity 2 66 0 261 268 275 0 chr5 157384035 157384177 -42245973 + MIR SINE MIR 82 262 0 650 219 142 62 chr5 157384448 157384864 -42245286 - MER113 DNA MER1_type? -72 449 1 253 320 139 8 chr5 157385507 157385629 -42244521 - MIR SINE MIR -120 142 5 863 153 0 0 chr5 157385683 157385801 -42244349 - AluJb SINE Alu -194 118 1 212 296 0 57 chr5 157387049 157387137 -42243013 - L2 LINE L2 -1 3271 3189 2081 139 7 3 chr5 157387820 157388129 -42242021 + AluSx SINE Alu 1 310 -2 234 0 0 0 chr5 157388154 157388180 -42241970 + (T)n Simple_repeat Simple_repeat 1 26 0 1016 168 0 0 chr5 157389832 157390028 -42240122 + L1MA5 LINE L1 6105 6300 0 22 56 0 0 chr5 157390124 157390160 -42239990 + AT_rich Low_complexity Low_complexity 1 36 0 2099 117 0 17 chr5 157390164 157390455 -42239695 + AluSg SINE Alu 1 286 -24 612 289 18 62 chr5 157390658 157390931 -42239219 + MIR SINE MIR 2 262 0 265 164 27 0 chr5 157391241 157391314 -42238836 + (TA)n Simple_repeat Simple_repeat 1 75 0 2502 223 52 19 chr5 157392356 157393029 -42237121 - L1ME1 LINE L1 -24 6142 5448 470 270 79 7 chr5 157393032 157393184 -42236966 - MIR SINE MIR -72 190 28 400 333 29 16 chr5 157394502 157394758 -42235392 + L1ME LINE L1 4939 5202 -944 368 295 89 31 chr5 157394825 157395290 -42234860 + L1ME LINE L1 5268 5754 -408 514 224 31 38 chr5 157396044 157396253 -42233897 + L1MC4a LINE L1 5713 5818 -303 31 58 0 0 chr5 157396509 157396561 -42233589 + AT_rich Low_complexity Low_complexity 1 52 0 54 16 0 0 chr5 157396688 157396749 -42233401 + AT_rich Low_complexity Low_complexity 1 61 0 258 254 70 49 chr5 157396766 157396908 -42233242 - MARNA DNA Mariner -26 560 416 1077 198 131 71 chr5 157396936 157397032 -42233118 + Charlie4a DNA MER1_type 16 105 -1856 2547 71 0 0 chr5 157397032 157397343 -42232807 + AluY SINE Alu 1 311 0 1077 198 131 71 chr5 157397343 157397696 -42232454 + Charlie4a DNA MER1_type 105 492 -16 268 219 0 0 chr5 157397803 157397867 -42232283 + MARNA DNA Mariner 313 376 -210 1545 153 16 73 chr5 157397900 157398213 -42231937 - AluJo SINE Alu -17 295 1 562 280 92 14 chr5 157398282 157398500 -42231650 - L2 LINE L2 -4 3309 3075 470 318 40 6 chr5 157398516 157398689 -42231461 + MIR SINE MIR 12 190 -72 277 225 81 96 chr5 157399083 157399292 -42230858 - L2 LINE L2 -1 3312 3107 480 290 40 30 chr5 157399323 157399523 -42230627 - L2 LINE L2 -568 2746 2545 219 230 115 35 chr5 157399593 157399680 -42230470 - MIR3 SINE MIR -21 187 94 250 289 0 33 chr5 157399777 157399867 -42230283 + GA-rich Low_complexity Low_complexity 2 88 0 244 336 48 0 chr5 157400276 157400422 -42229728 - MIR SINE MIR -44 218 66 211 27 27 27 chr5 157400437 157400474 -42229676 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 673 319 85 20 chr5 157400767 157401015 -42229135 + L2 LINE L2 3004 3267 -5 1123 247 28 12 chr5 157402658 157402982 -42227168 - MLT1D LTR MaLR 0 505 177 1247 101 0 48 chr5 157402996 157403184 -42226966 - AluSg/x SINE Alu 0 312 134 2755 29 0 0 chr5 157403184 157403495 -42226655 - AluYb8 SINE Alu -7 311 1 435 183 128 106 chr5 157403499 157403679 -42226471 - MLT1D LTR MaLR -440 186 3 5881 144 8 5 chr5 157403698 157405311 -42224839 - L1PB1 LINE L1 -2 6149 4536 936 160 47 27 chr5 157405308 157405564 -42224586 + L1M4 LINE L1 4383 4643 -1503 * 224 182 338 26 chr5 157405931 157406008 -42224142 - MIR3 SINE MIR -25 183 83 309 284 123 39 chr5 157406044 157406248 -42223902 + MIR SINE MIR 21 241 -21 1612 92 0 0 chr5 157406935 157407142 -42223008 + AluSg/x SINE Alu 92 298 -12 303 85 0 0 chr5 157407809 157407856 -42222294 + (A)n Simple_repeat Simple_repeat 1 47 0 291 249 34 73 chr5 157408602 157408779 -42221371 + L1ME4a LINE L1 5718 5887 -234 2042 70 0 12 chr5 157408837 157409095 -42221055 + AluY SINE Alu 39 293 -18 25 0 0 0 chr5 157409205 157409230 -42220920 + AT_rich Low_complexity Low_complexity 1 25 0 749 128 101 0 chr5 157409238 157409386 -42220764 + L1MB3 LINE L1 6021 6183 0 624 91 0 0 chr5 157410077 157410165 -42219985 + (AATTG)n Simple_repeat Simple_repeat 2 89 0 290 283 53 48 chr5 157410433 157410620 -42219530 - L2 LINE L2 -273 2999 2812 360 289 90 71 chr5 157410704 157411015 -42219135 + L2 LINE L2 2587 2903 -411 185 318 16 0 chr5 157411028 157411091 -42219059 + L2 LINE L2 3243 3306 -7 208 355 168 9 chr5 157411929 157412036 -42218114 + L2 LINE L2 3149 3272 0 375 257 28 9 chr5 157412421 157412530 -42217620 + MIR SINE MIR 123 233 -29 188 261 0 0 chr5 157413067 157413113 -42217037 - MIR SINE MIR -84 124 79 954 300 149 31 chr5 157413259 157414009 -42216141 + L2 LINE L2 2441 3293 -20 1330 100 83 8 chr5 157415227 157415467 -42214683 + L1MA4 LINE L1 6038 6295 -5 250 354 31 56 chr5 157416141 157416302 -42213848 + MIR SINE MIR 35 191 -71 190 359 16 0 chr5 157416587 157416651 -42213499 + MIR3 SINE MIR 97 161 -47 239 333 0 13 chr5 157416655 157416733 -42213417 + MIR SINE MIR 34 110 -152 1570 251 20 24 chr5 157416741 157417234 -42212916 - L1ME1 LINE L1 -2 6164 5674 851 180 95 60 chr5 157417280 157417480 -42212670 - MER58A DNA MER1_type -17 207 1 1690 228 37 36 chr5 157417486 157418304 -42211846 - L1ME1 LINE L1 -521 5645 4819 1249 165 27 27 chr5 157418283 157418543 -42211607 + L1MD3 LINE L1 7735 7994 -1 * 429 209 48 9 chr5 157418539 157418644 -42211506 - L1ME1 LINE L1 -1287 4859 4751 * 406 244 69 92 chr5 157418692 157418823 -42211327 + L2 LINE L2 3141 3268 -4 297 292 14 0 chr5 157419335 157419407 -42210743 - L2 LINE L2 -32 3240 3168 216 0 0 0 chr5 157419544 157419568 -42210582 + (CCAA)n Simple_repeat Simple_repeat 2 25 0 246 200 73 0 chr5 157421157 157421212 -42208938 - L2 LINE L2 -5 3308 3250 2347 96 0 10 chr5 157422258 157422559 -42207591 - AluSg SINE Alu -12 298 1 205 260 0 40 chr5 157422593 157422643 -42207507 - L3 LINE CR1 -10 1567 1520 481 305 42 11 chr5 157423574 157423764 -42206386 + MIR SINE MIR 15 210 -52 660 295 33 14 chr5 157424396 157424606 -42205544 + MIR SINE MIR 49 262 0 338 250 82 28 chr5 157425134 157425317 -42204833 + MIR SINE MIR 11 252 -10 180 317 17 0 chr5 157426134 157426194 -42203956 - MIR3 SINE MIR -8 200 140 300 359 129 29 chr5 157426550 157426759 -42203391 + MER115 DNA AcHobo 207 436 -257 459 301 70 91 chr5 157426817 157427159 -42202991 + L2 LINE L2 2938 3272 0 667 316 49 12 chr5 157427800 157428047 -42202103 - MIR SINE MIR -4 258 3 651 271 100 70 chr5 157428246 157428715 -42201435 - MLT1H1 LTR MaLR -8 547 65 512 289 114 22 chr5 157428886 157429114 -42201036 - MIR SINE MIR -5 257 9 509 270 75 8 chr5 157429798 157430039 -42200111 + MIR SINE MIR 2 258 -4 186 311 68 72 chr5 157430140 157430375 -42199775 + MIR SINE MIR 29 262 0 193 250 0 0 chr5 157430386 157430430 -42199720 - L2 LINE L2 -15 3298 3255 2589 324 140 26 chr5 157431706 157433749 -42196401 + L2 LINE L2 985 3271 -1 252 350 17 8 chr5 157433952 157434072 -42196078 - MIR SINE MIR -6 256 136 244 213 96 0 chr5 157434205 157434299 -42195851 + Charlie7 DNA MER1_type 55 157 -2455 688 272 58 60 chr5 157434429 157434600 -42195550 + Charlie7 DNA MER1_type 373 543 -2069 1292 230 13 45 chr5 157434600 157434982 -42195168 + MLT1A2 LTR MaLR 1 370 -4 688 272 58 60 chr5 157434982 157435306 -42194844 + Charlie7 DNA MER1_type 543 867 -1745 952 263 79 61 chr5 157435310 157435574 -42194576 + MLT1J LTR MaLR 3 282 -229 1806 257 57 42 chr5 157435574 157436153 -42193997 - MLT1E LTR MaLR -2 591 4 952 263 79 61 chr5 157436153 157436379 -42193771 + MLT1J LTR MaLR 282 502 -9 2312 255 48 50 chr5 157436394 157437462 -42192688 + Charlie7 DNA MER1_type 872 1937 -675 1794 241 78 6 chr5 157437462 157437959 -42192191 - MLT1E LTR MaLR 0 593 61 1124 223 123 25 chr5 157438013 157438483 -42191667 + Charlie7 DNA MER1_type 1934 2449 -163 29 47 0 0 chr5 157438491 157438534 -42191616 + AT_rich Low_complexity Low_complexity 1 43 0 1134 148 90 28 chr5 157438646 157438936 -42191214 + MER33 DNA MER1_type 1 308 -16 42279 36 4 1 chr5 157439563 157445697 -42184453 + L1PA4 LINE L1 4 6152 -3 300 337 199 6 chr5 157445973 157446154 -42183996 - L3 LINE CR1 -183 1394 1179 1677 197 84 30 chr5 157446184 157446554 -42183596 - MLT1B LTR MaLR 0 390 1 218 227 106 0 chr5 157446596 157446662 -42183488 - MIR SINE MIR -88 120 48 655 170 9 0 chr5 157446971 157447077 -42183073 + MER45A DNA AcHobo 66 172 -6 2418 107 0 0 chr5 157447099 157447409 -42182741 + AluSx SINE Alu 1 310 -2 253 204 19 19 chr5 157447428 157447482 -42182668 + MIR SINE MIR 30 83 -125 538 259 117 74 chr5 157447635 157448002 -42182148 + MLT1K LTR MaLR 85 467 -121 328 206 0 44 chr5 157448105 157448173 -42181977 + L2 LINE L2 3190 3254 -18 198 343 93 36 chr5 157448753 157448893 -42181257 + L3 LINE CR1 1319 1466 -111 1824 172 159 8 chr5 157449033 157449405 -42180745 + MSTA LTR MaLR 1 428 0 241 292 31 0 chr5 157449529 157449594 -42180556 + L2 LINE L2 3247 3313 0 244 315 154 15 chr5 157450090 157450220 -42179930 - MIR3 SINE MIR -28 180 33 1089 278 127 19 chr5 157450803 157451336 -42178814 + L2 LINE L2 2725 3309 -4 2184 89 11 0 chr5 157451437 157451751 -42178399 + AluSp SINE Alu 3 319 0 253 158 123 0 chr5 157451963 157452020 -42178130 + MER117 DNA MER1_type 2 65 -132 220 308 100 25 chr5 157452313 157452433 -42177717 + MIR SINE MIR 63 191 -71 895 274 20 16 chr5 157453547 157453799 -42176351 - MIR SINE MIR -9 253 1 5763 88 1 42 chr5 157454206 157455025 -42175125 - L1PA8A LINE L1 0 6131 5346 1486 208 88 20 chr5 157455052 157455451 -42174699 + Charlie4a DNA MER1_type 41 466 -42 435 223 23 62 chr5 157455485 157455615 -42174535 - MIR SINE MIR -50 212 88 426 246 152 0 chr5 157456471 157456609 -42173541 + MIR SINE MIR 91 249 -13 365 298 92 30 chr5 157456628 157456759 -42173391 + MIR SINE MIR 3 141 -121 837 65 0 0 chr5 157456934 157457042 -42173108 - AluY SINE Alu -9 302 195 341 324 95 7 chr5 157457527 157457675 -42172475 - MIR SINE MIR -85 177 17 1118 217 29 0 chr5 157457957 157458164 -42171986 + MER45B DNA AcHobo 2 214 -826 257 175 0 0 chr5 157458158 157458198 -42171952 + MER45B DNA AcHobo 999 1038 -2 * 511 185 54 0 chr5 157458383 157458475 -42171675 + LTR54B LTR ERV1 6 102 -396 2584 179 80 80 chr5 157458475 157459192 -42170958 + LTR8A LTR ERV1 1 717 -10 1147 176 105 20 chr5 157459278 157459574 -42170576 + LTR54B LTR ERV1 176 496 -2 2208 137 26 67 chr5 157460588 157461043 -42169107 - MLT2D LTR ERVL 0 520 1 275 281 0 61 chr5 157461062 157461144 -42169006 - MER5B DNA MER1_type -55 123 47 475 260 20 20 chr5 157461553 157461699 -42168451 - MER103 DNA DNA -1 165 20 276 354 104 14 chr5 157462392 157462536 -42167614 - MER91A DNA MER1_type -34 162 6 245 299 76 110 chr5 157462885 157463176 -42166974 - L2 LINE L2 -45 3227 2947 575 307 191 41 chr5 157463250 157464416 -42165734 - L2 LINE L2 -609 2705 1365 258 32 0 0 chr5 157465448 157465479 -42164671 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4510 110 13 6 chr5 157465515 157466230 -42163920 + MER51C LTR ERV1 1 640 0 199 306 0 0 chr5 157466259 157466321 -42163829 + L2 LINE L2 1773 1834 -1480 23 33 0 0 chr5 157466360 157466390 -42163760 + AT_rich Low_complexity Low_complexity 1 30 0 345 327 78 28 chr5 157466519 157466736 -42163414 + L2 LINE L2 1916 2143 -1171 215 303 13 40 chr5 157466802 157466878 -42163272 - MIR3 SINE MIR -48 160 87 872 294 87 3 chr5 157467779 157468089 -42162061 + LTR16A LTR ERVL 114 449 -1 396 279 26 19 chr5 157468385 157468539 -42161611 + MER117 DNA MER1_type 1 155 -42 345 352 104 53 chr5 157468833 157469171 -42160979 + L2 LINE L2 2916 3270 -2 2428 77 3 0 chr5 157469830 157470127 -42160023 + AluSp SINE Alu 1 298 -15 456 263 263 0 chr5 157472579 157472739 -42157411 - MIR SINE MIR -49 213 12 747 276 31 5 chr5 157472790 157472986 -42157164 - MIR SINE MIR -55 207 7 240 282 94 34 chr5 157473077 157473194 -42156956 + MIR SINE MIR 139 262 0 789 196 87 6 chr5 157473206 157473379 -42156771 - MIR SINE MIR -14 248 62 920 278 17 0 chr5 157475486 157475716 -42154434 - MIR SINE MIR -14 248 15 514 327 35 5 chr5 157476660 157476859 -42153291 - MIR SINE MIR -46 216 12 234 259 136 12 chr5 157477039 157477120 -42153030 - MIR SINE MIR -122 140 50 450 270 44 7 chr5 157478033 157478170 -42151980 - MIR SINE MIR -40 222 81 380 319 0 9 chr5 157478498 157478614 -42151536 + L2 LINE L2 3199 3313 0 634 294 92 24 chr5 157480551 157480843 -42149307 + MER102b DNA MER1_type 1 312 -29 376 335 74 10 chr5 157480866 157481069 -42149081 + MIR SINE MIR 47 262 0 371 248 230 5 chr5 157481415 157481630 -42148520 + MIR SINE MIR 6 258 -4 21 0 0 0 chr5 157481862 157481883 -42148267 + AT_rich Low_complexity Low_complexity 1 21 0 5984 100 31 11 chr5 157482197 157483115 -42147035 + Tigger4(Zombi) DNA MER2_type 1 2731 0 224 146 36 36 chr5 157483178 157483233 -42146917 - L2 LINE L2 -1 3312 3258 566 322 34 17 chr5 157483248 157483487 -42146663 - MIR SINE MIR -19 243 1 187 242 0 0 chr5 157483574 157483607 -42146543 + MIR SINE MIR 218 250 -12 22 0 0 0 chr5 157483631 157483653 -42146497 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 157483859 157483880 -42146270 + AT_rich Low_complexity Low_complexity 1 21 0 203 152 0 0 chr5 157485404 157485437 -42144713 + (ATG)n Simple_repeat Simple_repeat 3 35 0 341 198 151 0 chr5 157485611 157485697 -42144453 + LTR16A1 LTR ERVL 359 457 0 267 219 73 32 chr5 157485740 157485863 -42144287 + MIR SINE MIR 135 262 0 259 189 57 0 chr5 157486018 157486071 -42144079 - L2 LINE L2 -1 3312 3257 292 255 159 35 chr5 157486074 157486219 -42143931 + MIR SINE MIR 85 247 -15 320 0 25 0 chr5 157486932 157486972 -42143178 + (TG)n Simple_repeat Simple_repeat 1 41 0 2000 115 0 17 chr5 157487803 157488121 -42142029 + AluSg SINE Alu 1 313 0 315 347 149 45 chr5 157488273 157488727 -42141423 - L2 LINE L2 -223 3049 2544 218 223 128 53 chr5 157490203 157490297 -42139853 - L2 LINE L2 -8 3305 3205 199 294 90 102 chr5 157490611 157490934 -42139216 - L2 LINE L2 -44 3228 2910 334 225 100 25 chr5 157491051 157491171 -42138979 - L2 LINE L2 -549 2765 2637 309 364 110 9 chr5 157492090 157492318 -42137832 - MIR SINE MIR 0 262 12 491 296 41 17 chr5 157492895 157493067 -42137083 + MIR SINE MIR 20 195 -67 310 324 124 22 chr5 157493084 157493309 -42136841 - MIR SINE MIR -13 249 2 537 329 95 13 chr5 157493333 157493564 -42136586 - MIR SINE MIR -12 250 1 6613 87 19 58 chr5 157493783 157494462 -42135688 - L1PA13 LINE L1 -2 6161 5457 2159 68 7 24 chr5 157494462 157494758 -42135392 - AluY SINE Alu -20 291 1 6613 87 19 58 chr5 157494758 157495768 -42134382 - L1PA13 LINE L1 -706 5457 4516 580 320 11 23 chr5 157496238 157496413 -42133737 + MIR3 SINE MIR 9 181 -27 2012 104 93 37 chr5 157496552 157496907 -42133243 - THE1C LTR MaLR 0 375 1 1806 150 10 14 chr5 157497778 157498072 -42132078 - AluSg SINE Alu -17 293 1 348 111 0 0 chr5 157498748 157498802 -42131348 + (TG)n Simple_repeat Simple_repeat 2 55 0 264 311 27 0 chr5 157499347 157499421 -42130729 + L3 LINE CR1 1027 1102 -475 444 346 67 45 chr5 157499584 157499896 -42130254 + L3 LINE CR1 1229 1547 -30 1760 71 123 15 chr5 157500156 157500424 -42129726 + AluSc SINE Alu 1 297 -12 216 67 0 0 chr5 157501212 157501242 -42128908 + (CCA)n Simple_repeat Simple_repeat 2 31 0 433 246 17 34 chr5 157501321 157501439 -42128711 - MIR SINE MIR -132 130 15 1725 221 56 36 chr5 157501704 157501896 -42128254 + MER110A LTR ERV1 1 188 -294 1516 181 50 11 chr5 157501896 157502178 -42127972 + AluJo SINE Alu 1 293 -19 1725 221 56 36 chr5 157502178 157502467 -42127683 + MER110A LTR ERV1 188 476 -6 309 261 57 11 chr5 157503429 157503517 -42126633 + L2 LINE L2 3177 3268 -4 2279 80 0 7 chr5 157503809 157504095 -42126055 - AluSg SINE Alu -24 286 3 345 100 0 0 chr5 157504246 157504296 -42125854 + (TCTG)n Simple_repeat Simple_repeat 3 52 0 331 291 157 13 chr5 157504357 157504592 -42125558 - L1MC4a LINE L1 -302 5819 5654 302 324 21 21 chr5 157505825 157505970 -42124180 - L2 LINE L2 -601 2713 2569 184 333 11 43 chr5 157506432 157506525 -42123625 + L3 LINE CR1 1087 1176 -401 226 330 43 0 chr5 157506531 157506625 -42123525 - L2 LINE L2 -15 3257 3160 * 393 356 121 21 chr5 157506623 157506904 -42123246 + L3 LINE CR1 1173 1481 -96 326 273 167 15 chr5 157506895 157507027 -42123123 - MIR SINE MIR -52 210 59 * 1618 164 131 5 chr5 157507221 157507594 -42122556 + L1MD2 LINE L1 5927 6346 -13 736 331 59 18 chr5 157508244 157508582 -42121568 - MLT1K LTR MaLR -111 477 126 2162 198 9 72 chr5 157508793 157509350 -42120800 + L1M4 LINE L1 4644 5165 -981 33 0 0 0 chr5 157509355 157509388 -42120762 + AT_rich Low_complexity Low_complexity 1 33 0 2003 124 10 0 chr5 157509515 157509814 -42120336 - AluY SINE Alu -9 302 1 1304 215 52 38 chr5 157509904 157510304 -42119846 - LTR37A LTR ERV1 -17 409 4 249 283 72 76 chr5 157511799 157512036 -42118114 + L2 LINE L2 2307 2542 -772 1631 169 11 0 chr5 157512394 157512654 -42117496 + AluJo SINE Alu 21 283 -29 362 309 59 26 chr5 157512794 157512946 -42117204 + MER117 DNA MER1_type 5 161 -36 227 175 0 35 chr5 157513463 157513520 -42116630 + A-rich Low_complexity Low_complexity 4 58 0 380 304 136 11 chr5 157513733 157513924 -42116226 - MIR SINE MIR -1 261 47 2376 80 104 8 chr5 157514937 157515313 -42114837 - LTR7 LTR ERV1 -38 412 1 1692 99 11 18 chr5 157515313 157515586 -42114564 - HERVH LTR ERV1 0 7713 7443 1014 105 6 50 chr5 157515584 157515765 -42114385 - HERVH LTR ERV1 -1953 5760 5588 * 2493 166 0 0 chr5 157515745 157516149 -42114001 - HERVH LTR ERV1 -2564 5149 4746 911 90 0 0 chr5 157516150 157516272 -42113878 + HERVH LTR ERV1 3414 3535 -4178 725 271 103 36 chr5 157516304 157516662 -42113488 - L1MC4a LINE L1 -1959 5849 5468 2359 80 0 0 chr5 157516995 157517284 -42112866 - AluSc SINE Alu -20 289 1 213 338 0 0 chr5 157517921 157517992 -42112158 - MIR3 SINE MIR -13 195 125 462 168 50 30 chr5 157517993 157518021 -42112129 + AluSg/x SINE Alu 181 207 -121 1745 149 0 0 chr5 157518021 157518269 -42111881 + AluSx SINE Alu 1 248 -64 462 168 50 30 chr5 157518269 157518386 -42111764 + AluSg/x SINE Alu 207 328 0 2201 95 3 3 chr5 157519041 157519346 -42110804 + AluSg SINE Alu 1 305 -5 860 208 0 6 chr5 157520204 157520363 -42109787 + MLT1A2 LTR MaLR 4 161 -213 1380 180 29 8 chr5 157520367 157520606 -42109544 + AluJo SINE Alu 1 244 -68 253 175 0 0 chr5 157520641 157520712 -42109438 + AluJo SINE Alu 244 314 0 1015 217 23 36 chr5 157520725 157520946 -42109204 + MLT1A2 LTR MaLR 157 374 0 14612 186 65 43 chr5 157521143 157523429 -42106721 + L1M1 LINE L1 14 2247 -5318 1887 183 0 0 chr5 157523429 157523729 -42106421 + AluSx SINE Alu 1 300 -12 14612 186 65 43 chr5 157523729 157525049 -42105101 + L1M1 LINE L1 2247 3753 -3812 2049 133 7 10 chr5 157525049 157525351 -42104799 + AluSx SINE Alu 11 311 -1 14612 186 65 43 chr5 157525351 157526295 -42103855 + L1M1 LINE L1 3753 4674 -2891 6156 109 39 39 chr5 157526290 157526401 -42103749 + L1MA2 LINE L1 5169 5278 -1026 * 585 0 0 0 chr5 157526401 157526466 -42103684 + (TA)n Simple_repeat Simple_repeat 1 65 0 6156 109 39 39 chr5 157526466 157527489 -42102661 + L1MA2 LINE L1 5278 6296 -8 22 0 0 0 chr5 157527682 157527704 -42102446 + AT_rich Low_complexity Low_complexity 1 22 0 520 304 65 5 chr5 157528136 157528353 -42101797 - LTR67 LTR ERVL 0 557 328 356 248 60 45 chr5 157528447 157528580 -42101570 - LTR67 LTR ERVL -419 138 4 289 305 76 45 chr5 157528586 157528809 -42101341 + L1ME LINE L1 5499 5728 -393 451 268 107 12 chr5 157528809 157528977 -42101173 - MIR SINE MIR -5 257 74 2041 101 67 45 chr5 157529262 157529618 -42100532 - THE1B LTR MaLR 0 364 1 278 243 153 72 chr5 157530275 157530386 -42099764 - MER5A DNA MER1_type -21 168 49 1946 212 33 44 chr5 157530445 157530927 -42099223 + MLT1D LTR MaLR 27 503 -2 3706 178 6 4 chr5 157530945 157531626 -42098524 - L1PA15 LINE L1 0 6816 6135 23 0 0 0 chr5 157531737 157531760 -42098390 + AT_rich Low_complexity Low_complexity 1 23 0 2060 98 0 10 chr5 157531760 157532055 -42098095 - L1PB1 LINE L1 -2 6149 5858 1670 39 0 0 chr5 157532055 157532260 -42097890 + L1PA4 LINE L1 5947 6152 -3 3991 164 6 4 chr5 157532270 157534211 -42095939 - L1PB1 LINE L1 -278 5873 3772 1262 115 0 0 chr5 157534212 157534404 -42095746 - L1PA15 LINE L1 -664 6152 5961 397 145 26 0 chr5 157534401 157534477 -42095673 + L1MA1 LINE L1 6017 6094 -208 * 15099 229 29 9 chr5 157534457 157538891 -42091259 - L1PA15 LINE L1 -823 5974 1444 400 287 0 57 chr5 157538879 157539001 -42091149 - L1PA15 LINE L1 -6665 122 8 * 1788 266 112 38 chr5 157539040 157540088 -42090062 + L2 LINE L2 2141 3300 -13 187 361 36 12 chr5 157541707 157541790 -42088360 - MIR3 SINE MIR -45 163 79 458 319 104 21 chr5 157542187 157542428 -42087722 - MIR SINE MIR 0 262 2 358 320 118 50 chr5 157542887 157543287 -42086863 - L2 LINE L2 0 3313 2887 213 359 0 34 chr5 157543647 157543764 -42086386 - MIR SINE MIR 0 262 150 286 170 160 47 chr5 157544149 157544255 -42085895 - MLT1K LTR MaLR -3 585 468 394 103 0 0 chr5 157544364 157544422 -42085728 - Alu SINE Alu 0 302 245 1513 65 5 20 chr5 157544426 157544626 -42085524 + AluY SINE Alu 97 293 -18 2136 131 7 0 chr5 157544631 157544929 -42085221 + AluSx SINE Alu 1 300 -12 431 254 25 17 chr5 157545746 157545864 -42084286 + MIR SINE MIR 75 193 -69 225 0 0 0 chr5 157545988 157546013 -42084137 + (CA)n Simple_repeat Simple_repeat 2 26 0 917 292 29 19 chr5 157546043 157546358 -42083792 - LTR33 LTR ERVL -6 515 198 1027 286 19 0 chr5 157546380 157546639 -42083511 - L2 LINE L2 -679 2635 2372 180 0 0 0 chr5 157547283 157547303 -42082847 + (GA)n Simple_repeat Simple_repeat 1 20 0 2466 268 31 70 chr5 157547535 157548555 -42081595 - L2 LINE L2 -254 3059 2084 1894 156 23 3 chr5 157548702 157549003 -42081147 - AluJo SINE Alu -5 307 1 2190 128 0 0 chr5 157549154 157549450 -42080700 + AluSg SINE Alu 5 300 -10 845 95 27 0 chr5 157549450 157549597 -42080553 + (TA)n Simple_repeat Simple_repeat 1 151 0 296 221 116 0 chr5 157549768 157549863 -42080287 - MIR SINE MIR -6 256 151 437 271 23 8 chr5 157550308 157550441 -42079709 - MIR SINE MIR -115 147 13 770 230 102 43 chr5 157552659 157552894 -42077256 + MLT1L LTR MaLR 1 249 -366 307 239 220 0 chr5 157553051 157553160 -42076990 + MLT1L LTR MaLR 475 607 -8 269 301 142 0 chr5 157553662 157553775 -42076375 + L2 LINE L2 3139 3267 -5 321 304 149 28 chr5 157553934 157554148 -42076002 - MIR SINE MIR -15 247 8 210 255 39 0 chr5 157556543 157556594 -42073556 + L2 LINE L2 2927 2979 -334 27 0 0 0 chr5 157556848 157556875 -42073275 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr5 157556993 157557023 -42073127 + AT_rich Low_complexity Low_complexity 1 30 0 190 313 61 71 chr5 157557129 157557228 -42072922 + L2 LINE L2 3123 3220 -52 509 351 37 4 chr5 157559219 157559461 -42070689 - MIR SINE MIR -10 252 3 22 0 0 0 chr5 157559960 157559982 -42070168 + AT_rich Low_complexity Low_complexity 1 22 0 311 291 39 19 chr5 157560023 157560229 -42069921 - L1MC4a LINE L1 -1757 6051 5842 649 281 72 108 chr5 157560992 157561352 -42068798 - L2 LINE L2 0 3313 2967 1560 246 67 78 chr5 157561538 157561916 -42068234 - L2 LINE L2 -327 2986 2617 1439 204 108 28 chr5 157561916 157562342 -42067808 - MLT1C LTR MaLR -3 464 5 1560 246 67 78 chr5 157562342 157562672 -42067478 - L2 LINE L2 -696 2617 2285 204 125 0 0 chr5 157562751 157562783 -42067367 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 365 335 67 10 chr5 157562849 157563058 -42067092 - MIR SINE MIR -1 261 41 2206 109 0 3 chr5 157563215 157563415 -42066735 - AluY SINE Alu 0 311 112 540 45 0 0 chr5 157563415 157563482 -42066668 + (TCCC)n Simple_repeat Simple_repeat 2 68 0 * 684 0 0 0 chr5 157563481 157563557 -42066593 + (TTTC)n Simple_repeat Simple_repeat 2 77 0 2206 109 0 3 chr5 157563482 157563842 -42066308 - AluY SINE Alu -199 112 3 313 377 19 19 chr5 157564025 157564179 -42065971 + MIR3 SINE MIR 13 166 -42 767 260 54 50 chr5 157564183 157564441 -42065709 + MIR SINE MIR 2 260 -2 1653 162 101 3 chr5 157565133 157565379 -42064771 + MER46B DNA MER2_type 1 163 -2568 1017 7 44 0 chr5 157565379 157565514 -42064636 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 1653 162 101 3 chr5 157565514 157565595 -42064555 + MER46B DNA MER2_type 163 235 -1 770 248 138 0 chr5 157567695 157567913 -42062237 - MIR SINE MIR -3 259 12 368 227 0 9 chr5 157568174 157568284 -42061866 + (TA)n Simple_repeat Simple_repeat 2 110 0 478 264 87 57 chr5 157568294 157568559 -42061591 + L1ME4a LINE L1 5669 5941 -180 25 0 0 0 chr5 157568623 157568648 -42061502 + AT_rich Low_complexity Low_complexity 1 25 0 856 282 23 30 chr5 157568985 157569286 -42060864 + LTR67 LTR ERVL 5 303 -254 240 210 20 80 chr5 157569411 157569511 -42060639 + LTR67 LTR ERVL 464 557 0 238 295 39 0 chr5 157569783 157569861 -42060289 - MIR3 SINE MIR -1 207 127 297 0 0 0 chr5 157570798 157570831 -42059319 + (CA)n Simple_repeat Simple_repeat 1 33 0 1730 313 115 21 chr5 157570986 157572002 -42058148 + L2 LINE L2 503 1614 -1700 2004 145 0 3 chr5 157572063 157572366 -42057784 - AluJb SINE Alu -6 306 5 22 35 0 0 chr5 157572551 157572580 -42057570 + AT_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr5 157572608 157572643 -42057507 + AT_rich Low_complexity Low_complexity 1 35 0 5511 67 3 0 chr5 157572643 157573342 -42056808 - L1PA8 LINE L1 -6 6166 5466 1830 171 51 16 chr5 157573501 157573876 -42056274 - MLT1B LTR MaLR -2 388 1 1535 319 74 69 chr5 157574087 157575752 -42054398 + L2 LINE L2 1618 3301 -12 751 254 12 0 chr5 157576085 157576258 -42053892 - MER45A DNA AcHobo 0 178 4 279 136 0 0 chr5 157577178 157577237 -42052913 + (TTCC)n Simple_repeat Simple_repeat 1 59 0 945 103 5 32 chr5 157577272 157577457 -42052693 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 630 212 11 29 chr5 157578235 157578424 -42051726 + MIR SINE MIR 2 230 -32 283 267 200 18 chr5 157578665 157578830 -42051320 - MIR SINE MIR -21 241 47 2181 130 0 3 chr5 157579185 157579493 -42050657 - AluSx SINE Alu -5 307 1 959 125 15 0 chr5 157580416 157580552 -42049598 - FRAM SINE Alu -19 157 20 2059 144 0 7 chr5 157580610 157580916 -42049234 + AluSx SINE Alu 9 312 0 393 262 12 0 chr5 157581302 157581386 -42048764 + MER81 DNA DNA 1 85 -29 603 287 111 57 chr5 157581399 157581733 -42048417 - MLT1K LTR MaLR -35 553 202 2186 87 6 51 chr5 157582622 157582933 -42047217 + AluY SINE Alu 1 297 -14 357 243 62 42 chr5 157583092 157583236 -42046914 - MIR SINE MIR -40 222 76 289 340 70 0 chr5 157583375 157583475 -42046675 - L2 LINE L2 -18 3254 3148 254 191 0 0 chr5 157584343 157584385 -42045765 + L2 LINE L2 3219 3260 -12 369 267 182 0 chr5 157584489 157584654 -42045496 - MIR3 SINE MIR -7 201 7 209 205 0 0 chr5 157584693 157584732 -42045418 + (CAT)n Simple_repeat Simple_repeat 2 40 0 626 285 100 25 chr5 157584742 157584942 -42045208 - MIR SINE MIR -14 248 34 472 258 70 38 chr5 157584977 157585163 -42044987 - MIR SINE MIR -64 198 7 2006 92 0 4 chr5 157585394 157585655 -42044495 - AluSc SINE Alu -15 294 35 224 210 0 65 chr5 157586356 157586418 -42043732 + L2 LINE L2 3215 3272 0 196 292 15 46 chr5 157586499 157586564 -42043586 - L2 LINE L2 -14 3299 3237 223 192 19 0 chr5 157586831 157586883 -42043267 + GA-rich Low_complexity Low_complexity 4 56 0 2115 129 35 14 chr5 157586960 157587308 -42042842 + THE1A LTR MaLR 1 355 0 425 295 194 0 chr5 157588725 157588900 -42041250 + MIR SINE MIR 37 232 -30 305 296 78 41 chr5 157589243 157589371 -42040779 - L1ME4a LINE L1 -1 6120 5998 7674 137 14 28 chr5 157589371 157589610 -42040540 - HSMAR2 DNA Mariner -1 1301 1060 2155 124 13 0 chr5 157589610 157589916 -42040234 - AluSx SINE Alu 0 312 3 7674 137 14 28 chr5 157589916 157590994 -42039156 - HSMAR2 DNA Mariner -242 1060 3 305 296 78 41 chr5 157590994 157591209 -42038941 - L1ME4a LINE L1 -123 5998 5764 398 273 35 70 chr5 157592417 157592589 -42037561 + MLT1H LTR MaLR 140 305 -244 342 267 75 55 chr5 157592741 157592869 -42037281 - L2 LINE L2 0 3313 3180 1379 194 61 50 chr5 157592869 157593229 -42036921 - MLT1A1 LTR MaLR 0 365 2 342 267 75 55 chr5 157593229 157593246 -42036904 - L2 LINE L2 -133 3180 3165 1784 211 48 3 chr5 157593582 157593961 -42036189 + MSTD LTR MaLR 1 396 0 375 343 7 15 chr5 157593964 157594101 -42036049 - MER5A DNA MER1_type -8 181 46 235 250 115 19 chr5 157594567 157594671 -42035479 - L2 LINE L2 0 3313 3200 385 299 149 0 chr5 157594729 157594863 -42035287 - MIR SINE MIR -21 241 88 1029 212 22 4 chr5 157594879 157595110 -42035040 - MER57A LTR ERV1 -161 242 8 469 187 0 0 chr5 157595112 157595203 -42034947 - MER57A-int LTR ERV1 0 7537 7447 560 145 40 72 chr5 157595250 157595315 -42034835 - LTR54B LTR ERV1 -351 147 81 2332 141 5 19 chr5 157595315 157595683 -42034467 + THE1B LTR MaLR 1 363 -1 560 145 40 72 chr5 157595683 157595769 -42034381 - LTR54B LTR ERV1 -417 81 1 5911 208 17 26 chr5 157595770 157597130 -42033020 - MER57A-int LTR ERV1 -395 7142 2600 5760 192 34 57 chr5 157597419 157599165 -42030985 - MER57-int LTR ERV1 -1716 5821 4037 24 0 0 0 chr5 157599165 157599189 -42030961 + AT_rich Low_complexity Low_complexity 1 24 0 5760 192 34 57 chr5 157599189 157599364 -42030786 - MER57-int LTR ERV1 -3500 4037 1925 295 247 34 34 chr5 157599431 157599595 -42030555 - MER57-int LTR ERV1 -3194 1929 1763 2103 107 0 28 chr5 157599595 157599884 -42030266 - AluSg SINE Alu -16 294 14 295 247 34 34 chr5 157599884 157599897 -42030253 - MER57-int LTR ERV1 -3359 1764 1752 1891 212 11 41 chr5 157599913 157600376 -42029774 - LTR2 LTR ERV1 0 449 1 313 242 121 58 chr5 157600468 157600658 -42029492 + LTR48B LTR ERV1 148 349 -295 738 263 94 16 chr5 157600730 157600985 -42029165 - MER57-int LTR ERV1 -2650 1541 1267 841 260 25 8 chr5 157601125 157601360 -42028790 - MER34C LTR ERV1 -190 395 157 364 167 10 39 chr5 157601582 157601684 -42028466 - MER57-int LTR ERV1 -6695 842 744 2316 108 0 16 chr5 157601699 157602014 -42028136 + AluSx SINE Alu 1 310 -2 1583 194 12 58 chr5 157602037 157602466 -42027684 - MER57-int LTR ERV1 -6800 737 329 1634 119 47 18 chr5 157602466 157602795 -42027355 - MER61C LTR ERV1 0 434 2 1204 260 25 4 chr5 157602863 157603144 -42027006 - MER57A-int LTR ERV1 -7250 287 1 1752 219 5 3 chr5 157603645 157604014 -42026136 - MER57A LTR ERV1 -33 370 1 579 118 0 11 chr5 157604521 157604614 -42025536 + AluSg/x SINE Alu 217 308 -2 212 177 38 25 chr5 157606575 157606654 -42023496 + GA-rich Low_complexity Low_complexity 4 83 0 619 244 60 21 chr5 157606770 157606960 -42023190 - MIR SINE MIR -25 237 40 398 199 118 37 chr5 157608805 157608966 -42021184 - MER104 DNA Tc2 0 180 7 2033 153 2 54 chr5 157609839 157610244 -42019906 - MER89 LTR ERV1 0 559 176 1909 85 0 0 chr5 157610271 157610507 -42019643 - AluSg SINE Alu -21 289 54 8666 45 9 10 chr5 157610508 157611578 -42018572 + MER11C LTR ERVK 1 1069 -2 327 143 0 0 chr5 157611582 157611638 -42018512 - AluSg SINE Alu -245 56 1 267 140 40 0 chr5 157611638 157611688 -42018462 - MER89 LTR ERV1 -507 52 1 2324 148 28 26 chr5 157612042 157612469 -42017681 + MSTA LTR MaLR 1 428 0 1201 148 60 145 chr5 157612551 157612950 -42017200 + MLT1A1 LTR MaLR 1 365 0 268 296 151 40 chr5 157613148 157613300 -42016850 - LTR67 LTR ERVL -321 236 68 23 0 0 0 chr5 157613319 157613342 -42016808 + AT_rich Low_complexity Low_complexity 1 23 0 590 347 25 0 chr5 157614034 157614230 -42015920 - MIR SINE MIR -1 261 61 198 0 0 0 chr5 157614618 157614640 -42015510 + (CAAA)n Simple_repeat Simple_repeat 1 22 0 416 155 12 0 chr5 157614981 157615065 -42015085 - MER53 DNA DNA 0 189 105 229 313 45 5 chr5 157615067 157615265 -42014885 + L1ME LINE L1 796 1001 -5069 443 171 0 0 chr5 157615284 157615360 -42014790 + MLT1A1 LTR MaLR 290 365 0 553 302 104 61 chr5 157615360 157616274 -42013876 - L1MEd LINE L1 -5095 1024 72 252 0 0 0 chr5 157616295 157616323 -42013827 + (T)n Simple_repeat Simple_repeat 1 28 0 392 144 22 56 chr5 157616372 157616462 -42013688 - MER74A LTR ERVL 0 558 472 2196 204 22 32 chr5 157616462 157616967 -42013183 - MER74A LTR ERVL -58 500 1 2154 118 3 10 chr5 157617330 157617644 -42012506 + AluSq SINE Alu 1 312 -1 1901 164 0 7 chr5 157618784 157619107 -42011043 - AluJb SINE Alu 0 321 1 712 285 137 15 chr5 157620603 157620996 -42009154 - Charlie7 DNA MER1_type -2147 465 25 214 191 0 0 chr5 157621622 157621664 -42008486 + A-rich Low_complexity Low_complexity 1 42 0 453 302 127 28 chr5 157623257 157623548 -42006602 + MLT1K LTR MaLR 154 473 -115 292 325 38 25 chr5 157623747 157623916 -42006234 - MIR SINE MIR -16 192 20 225 188 0 42 chr5 157624289 157624337 -42005813 - L2 LINE L2 0 3313 3268 1099 213 128 0 chr5 157624407 157624642 -42005508 - AluJb SINE Alu -15 297 33 1672 173 87 54 chr5 157624770 157625216 -42004934 + MLT1C LTR MaLR 1 461 -6 460 298 110 9 chr5 157625209 157625437 -42004713 + Charlie8 DNA MER1_type 9 259 -2158 * 228 182 0 0 chr5 157626114 157626158 -42003992 - MIR SINE MIR -141 121 78 278 330 41 10 chr5 157626947 157627044 -42003106 - MIR SINE MIR -64 144 45 332 294 30 67 chr5 157627646 157627915 -42002235 + MER41E LTR ERV1 202 460 -52 573 269 99 25 chr5 157627937 157628138 -42002012 - MIR SINE MIR -13 249 34 1381 206 56 18 chr5 157628147 157628486 -42001664 - MLT1E2 LTR MaLR 0 626 275 2131 130 0 29 chr5 157628619 157628935 -42001215 + AluSx SINE Alu 1 307 -5 627 198 8 0 chr5 157629301 157629422 -42000728 - MLT1E2 LTR MaLR -430 194 73 375 230 87 24 chr5 157629309 157629435 -42000715 - MLT2C1 LTR ERVL -223 174 41 * 241 328 102 39 chr5 157630018 157630146 -42000004 + L2 LINE L2 3132 3267 -5 509 274 37 7 chr5 157631032 157631167 -41998983 + MIR3 SINE MIR 6 144 -64 468 240 8 8 chr5 157631245 157631366 -41998784 - LTR28 LTR ERV1 0 1020 900 1307 214 63 140 chr5 157631405 157632257 -41997893 - LTR1B LTR ERV1 -38 982 1 207 0 0 0 chr5 157632347 157632370 -41997780 + (TTG)n Simple_repeat Simple_repeat 2 24 0 408 249 40 60 chr5 157633015 157633216 -41996934 + Charlie7 DNA MER1_type 2 198 -2414 447 240 123 17 chr5 157633219 157633398 -41996752 + Charlie7 DNA MER1_type 313 510 -2102 * 836 228 42 131 chr5 157633382 157634220 -41995930 + Charlie7 DNA MER1_type 1696 2458 -154 2342 81 0 3 chr5 157634258 157634553 -41995597 - AluY SINE Alu -17 294 1 1462 175 3 61 chr5 157634562 157634834 -41995316 - AluJo SINE Alu -22 290 35 6101 67 5 20 chr5 157634834 157635626 -41994524 + LTR17 LTR ERV1 1 780 0 1462 175 3 61 chr5 157635626 157635650 -41994500 - AluJo SINE Alu -277 35 11 25 0 0 0 chr5 157635715 157635740 -41994410 + AT_rich Low_complexity Low_complexity 1 25 0 647 250 120 0 chr5 157636633 157636817 -41993333 - MIR SINE MIR -49 213 8 1454 139 49 11 chr5 157637037 157637303 -41992847 + L1MC1 LINE L1 5879 6154 -179 453 179 79 14 chr5 157637331 157637471 -41992679 + L1ME2 LINE L1 5167 5315 -831 9025 181 18 22 chr5 157637482 157639632 -41990518 + L1PA8 LINE L1 10 2155 -4306 39581 62 5 1 chr5 157639633 157645750 -41984400 - L1PA5 LINE L1 -7 6147 1 21601 116 10 13 chr5 157645748 157649690 -41980460 + L1PA8 LINE L1 2140 6084 -403 * 1888 113 72 0 chr5 157649690 157649955 -41980195 + AluSp SINE Alu 1 284 -29 388 0 0 0 chr5 157649955 157649998 -41980152 + (TAAA)n Simple_repeat Simple_repeat 2 168 0 21601 116 10 13 chr5 157649998 157650400 -41979750 + L1PA8 LINE L1 6084 6485 -2 3148 234 40 5 chr5 157650396 157651205 -41978945 + L1ME2 LINE L1 5319 6155 -9 * 787 180 47 106 chr5 157651390 157651645 -41978505 - L1MA10 LINE L1 -34 6300 6061 2186 128 0 0 chr5 157651899 157652197 -41977953 + AluSg SINE Alu 3 300 -10 24 53 0 0 chr5 157652736 157652774 -41977376 + AT_rich Low_complexity Low_complexity 1 38 0 2740 135 21 14 chr5 157652996 157653597 -41976553 - MER4E LTR ERV1 0 766 1 391 288 116 7 chr5 157653608 157653754 -41976396 - MIR SINE MIR -77 185 24 2101 139 0 0 chr5 157653997 157654298 -41975852 - AluSx SINE Alu -11 301 1 300 298 100 25 chr5 157654473 157654612 -41975538 - MIR3 SINE MIR -36 172 42 703 247 11 93 chr5 157654631 157654904 -41975246 - MIR SINE MIR -1 261 15 299 65 22 0 chr5 157655166 157655212 -41974938 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 246 79 0 26 chr5 157655521 157655559 -41974591 - LTR24C LTR ERV1 0 635 599 407 95 0 0 chr5 157655573 157655636 -41974514 - LTR24C LTR ERV1 -570 65 3 2368 206 112 27 chr5 157655638 157656202 -41973948 + MER21B LTR ERV1 25 636 -227 2622 166 19 12 chr5 157656393 157656875 -41973275 - MER31A LTR ERV1 0 485 1 555 112 0 0 chr5 157658529 157658618 -41971532 + (TA)n Simple_repeat Simple_repeat 2 90 0 376 232 0 0 chr5 157658620 157658689 -41971461 + MER21B LTR ERV1 22 90 -773 361 240 13 0 chr5 157658708 157658783 -41971367 + MER21B LTR ERV1 19 94 -769 * 557 248 105 0 chr5 157658781 157658934 -41971216 + MER21B LTR ERV1 43 211 -652 853 189 7 7 chr5 157658940 157659093 -41971057 + MER21B LTR ERV1 577 729 -134 1504 146 45 0 chr5 157659095 157659160 -41970990 + AluSx SINE Alu 56 117 -195 315 0 0 0 chr5 157659160 157659195 -41970955 + (CA)n Simple_repeat Simple_repeat 2 36 0 1504 146 45 0 chr5 157659195 157659375 -41970775 + AluSx SINE Alu 117 312 0 13766 26 0 0 chr5 157659487 157661114 -41969036 - L1P LINE L1 -889 5257 3631 29 70 0 0 chr5 157661152 157661209 -41968941 + AT_rich Low_complexity Low_complexity 1 57 0 195 42 0 0 chr5 157661440 157661464 -41968686 + (TAA)n Simple_repeat Simple_repeat 2 25 0 402 175 97 61 chr5 157661466 157661580 -41968570 + MER21B LTR ERV1 735 852 -11 445 220 92 0 chr5 157661803 157661937 -41968213 + MER58B DNA MER1_type 169 322 -19 37 39 0 0 chr5 157663222 157663273 -41966877 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr5 157663311 157663334 -41966816 + AT_rich Low_complexity Low_complexity 1 23 0 726 281 180 36 chr5 157663358 157663892 -41966258 + MLT1L LTR MaLR 5 615 0 1793 142 60 38 chr5 157664269 157664636 -41965514 + THE1C LTR MaLR 1 375 0 395 252 22 7 chr5 157665100 157665235 -41964915 + L1ME LINE L1 5590 5726 -395 2455 301 21 38 chr5 157665248 157666040 -41964110 + L1PA15 LINE L1 1 779 -6008 14990 234 22 14 chr5 157666103 157670737 -41959413 + L1PA15 LINE L1 1324 5993 -804 3686 134 62 27 chr5 157670740 157671716 -41958434 + MER11A LTR ERVK 1 1266 0 5000 140 9 6 chr5 157671722 157672536 -41957614 + L1PA15 LINE L1 5997 6812 -4 321 289 45 19 chr5 157672536 157672692 -41957458 + L1ME4a LINE L1 3323 3482 -2664 254 309 40 63 chr5 157672805 157673057 -41957093 + L1P LINE L1 3589 3834 -2312 1764 307 135 48 chr5 157673329 157674096 -41956054 + L2 LINE L2 1425 2124 -1189 2057 143 0 0 chr5 157674096 157674397 -41955753 - AluSc SINE Alu -8 301 1 1764 307 135 48 chr5 157674397 157675370 -41954780 + L2 LINE L2 2124 3304 -9 413 306 80 107 chr5 157675391 157675527 -41954623 + L1ME4a LINE L1 4260 4398 -1748 2025 122 7 0 chr5 157675527 157675806 -41954344 + AluSg SINE Alu 14 294 -16 393 39 0 0 chr5 157675811 157675862 -41954288 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 413 306 80 107 chr5 157675862 157676081 -41954069 + L1ME4a LINE L1 4402 4625 -1521 795 134 8 45 chr5 157676081 157676215 -41953935 - FLAM_C SINE Alu 0 133 5 413 306 80 107 chr5 157676215 157676662 -41953488 + L1ME4a LINE L1 4625 5047 -1099 24 32 0 0 chr5 157676728 157676759 -41953391 + AT_rich Low_complexity Low_complexity 1 31 0 265 284 16 44 chr5 157676826 157677009 -41953141 + L1ME4a LINE L1 5258 5435 -686 489 270 90 47 chr5 157677029 157677425 -41952725 + L1ME4a LINE L1 5494 5918 -203 234 222 30 40 chr5 157677610 157677709 -41952441 + (TTAAA)n Simple_repeat Simple_repeat 4 101 0 423 329 22 44 chr5 157677830 157678055 -41952095 - MIR SINE MIR -36 226 7 243 313 10 0 chr5 157678720 157678819 -41951331 + CT-rich Low_complexity Low_complexity 1 100 0 447 35 0 0 chr5 157678828 157678885 -41951265 + (CA)n Simple_repeat Simple_repeat 2 58 0 3292 192 59 61 chr5 157679758 157680687 -41949463 + L1MB7 LINE L1 5258 6184 0 306 0 0 0 chr5 157680699 157680733 -41949417 + (TG)n Simple_repeat Simple_repeat 1 34 0 273 188 116 0 chr5 157680740 157680809 -41949341 - L1ME4a LINE L1 -98 6023 5947 403 266 12 0 chr5 157680888 157681061 -41949089 + (TA)n Simple_repeat Simple_repeat 2 176 0 642 224 88 0 chr5 157681643 157681813 -41948337 + MER53 DNA DNA 1 185 -4 353 346 90 48 chr5 157683091 157683403 -41946747 + L2 LINE L2 2947 3271 -1 590 251 95 33 chr5 157683484 157683727 -41946423 + MIR SINE MIR 5 262 0 204 313 0 16 chr5 157685074 157685138 -41945012 - MER5A DNA MER1_type -117 72 10 432 264 48 32 chr5 157685651 157685776 -41944374 + L2 LINE L2 3187 3313 0 2111 192 38 2 chr5 157686744 157687161 -41942989 + MSTB1 LTR MaLR 1 432 0 1369 260 94 61 chr5 157687458 157688193 -41941957 + MER20B DNA MER1_type 2 760 -23 333 145 65 0 chr5 157688258 157688320 -41941830 - L1ME3A LINE L1 -88 6082 6017 191 36 36 0 chr5 157688322 157688350 -41941800 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 330 222 25 0 chr5 157688420 157688501 -41941649 - L1M4 LINE L1 -1299 4847 4765 6132 82 20 12 chr5 157688601 157688691 -41941459 + L1PA13 LINE L1 5291 5379 -784 258 32 0 0 chr5 157688691 157688722 -41941428 + (TA)n Simple_repeat Simple_repeat 1 31 0 6132 82 20 12 chr5 157688722 157689496 -41940654 + L1PA13 LINE L1 5379 6162 -1 365 311 29 0 chr5 157689509 157689612 -41940538 - MER91B DNA MER1_type -51 139 34 211 146 24 0 chr5 157689793 157689834 -41940316 + L2 LINE L2 3272 3313 0 1271 183 44 0 chr5 157689865 157690116 -41940034 - L1PB4 LINE L1 -2 6154 5893 1912 137 0 14 chr5 157691051 157691343 -41938807 + AluJb SINE Alu 1 288 -24 325 239 54 84 chr5 157691759 157691926 -41938224 + MLT1J2 LTR MaLR 1 200 -303 292 316 132 7 chr5 157691983 157692119 -41938031 - MIR SINE MIR -103 159 7 23 0 0 0 chr5 157692399 157692422 -41937728 + AT_rich Low_complexity Low_complexity 1 23 0 1021 240 18 5 chr5 157692892 157693113 -41937037 - MER58A DNA MER1_type 0 224 1 423 301 67 67 chr5 157693165 157693434 -41936716 - L2 LINE L2 0 3313 3045 310 258 53 76 chr5 157693516 157693648 -41936502 - MIR SINE MIR -108 154 26 344 185 152 54 chr5 157693806 157693898 -41936252 - L2 LINE L2 -2 3270 3170 603 241 55 35 chr5 157693899 157694098 -41936052 + MER63A DNA MER1_type 7 209 -1 610 305 11 5 chr5 157695759 157695949 -41934201 - Charlie8 DNA MER1_type -2154 263 73 395 273 111 12 chr5 157696147 157696319 -41933831 - L1ME3A LINE L1 -9 6161 5973 321 250 0 40 chr5 157697692 157697792 -41932358 + L1ME4a LINE L1 5481 5576 -545 1658 257 91 23 chr5 157697848 157698365 -41931785 + MLT1E2 LTR MaLR 75 626 0 452 299 79 0 chr5 157698432 157698646 -41931504 + L1ME4a LINE L1 5676 5906 -215 242 273 15 30 chr5 157699057 157699123 -41931027 - L2 LINE L2 0 3272 3208 400 294 81 45 chr5 157699380 157699601 -41930549 + MLT1K LTR MaLR 129 357 -231 228 275 116 36 chr5 157699634 157699772 -41930378 + MLT1K LTR MaLR 423 571 -17 228 343 55 14 chr5 157700834 157700907 -41929243 - MER91A DNA MER1_type -8 188 113 924 320 114 9 chr5 157700990 157701430 -41928720 - MLT1L LTR MaLR -88 527 42 21 0 0 0 chr5 157701730 157701751 -41928399 + AT_rich Low_complexity Low_complexity 1 21 0 8748 156 22 12 chr5 157701833 157704443 -41925707 + L1MA5 LINE L1 3664 6297 -3 363 313 40 40 chr5 157704580 157704781 -41925369 - MLT1K LTR MaLR -212 376 176 52 99 0 0 chr5 157704956 157705127 -41925023 + AT_rich Low_complexity Low_complexity 1 171 0 5532 199 39 41 chr5 157705152 157707276 -41922874 + L1MB7 LINE L1 3959 6081 -103 246 32 0 0 chr5 157707541 157707572 -41922578 + (CAAAAA)n Simple_repeat Simple_repeat 1 31 0 236 270 16 16 chr5 157707930 157707993 -41922157 - L2 LINE L2 0 3272 3210 358 379 14 7 chr5 157708216 157708361 -41921789 + MIR SINE MIR 21 166 -96 7300 159 14 6 chr5 157710238 157711555 -41918595 - L1P LINE L1 -1275 4871 3544 214 191 0 0 chr5 157711843 157711885 -41918265 + T-rich Low_complexity Low_complexity 1 42 0 774 287 137 18 chr5 157712511 157712905 -41917245 + Charlie7 DNA MER1_type 25 465 -2147 542 284 37 0 chr5 157713967 157714101 -41916049 - MER74A LTR ERVL -322 236 98 793 311 78 63 chr5 157714143 157714946 -41915204 + L1MEd LINE L1 210 1024 -5095 470 171 0 0 chr5 157714946 157715022 -41915128 - MLT1A1 LTR MaLR 0 365 290 267 313 45 5 chr5 157715041 157715239 -41914911 - L1ME LINE L1 -5069 1001 796 439 155 12 0 chr5 157715241 157715325 -41914825 + MER53 DNA DNA 105 189 0 198 0 0 0 chr5 157715666 157715688 -41914462 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 593 347 25 0 chr5 157716076 157716272 -41913878 + MIR SINE MIR 61 261 -1 23 0 0 0 chr5 157716964 157716987 -41913163 + AT_rich Low_complexity Low_complexity 1 23 0 351 298 81 115 chr5 157717006 157717356 -41912794 + LTR67 LTR ERVL 68 428 -129 1204 148 60 145 chr5 157717356 157717755 -41912395 - MLT1A1 LTR MaLR 0 365 1 351 298 81 115 chr5 157717755 157717837 -41912313 + LTR67 LTR ERVL 428 483 -74 2324 148 28 26 chr5 157717837 157718264 -41911886 - MSTA LTR MaLR 0 428 1 351 298 81 115 chr5 157718264 157718336 -41911814 + LTR67 LTR ERVL 483 556 -1 282 140 40 0 chr5 157718618 157718668 -41911482 + MER89 LTR ERV1 1 52 -507 347 143 0 0 chr5 157718668 157718724 -41911426 + AluSg SINE Alu 1 56 -247 8643 45 9 10 chr5 157718728 157719798 -41910352 - MER11C LTR ERVK -2 1069 1 1904 85 0 0 chr5 157719799 157720035 -41910115 + AluSg SINE Alu 54 289 -21 2163 159 2 53 chr5 157720053 157720467 -41909683 + MER89 LTR ERV1 167 559 0 445 203 117 37 chr5 157721338 157721501 -41908649 + MER104 DNA Tc2 5 180 0 616 244 60 21 chr5 157723346 157723536 -41906614 + MIR SINE MIR 40 237 -25 212 177 38 25 chr5 157723652 157723731 -41906419 + CT-rich Low_complexity Low_complexity 4 83 0 584 110 0 11 chr5 157725696 157725787 -41904363 - AluSg/x SINE Alu -4 306 217 1868 219 5 3 chr5 157726294 157726663 -41903487 + MER57A LTR ERV1 1 370 -33 1297 260 25 4 chr5 157727164 157727445 -41902705 + MER57A-int LTR ERV1 1 287 -7250 1729 142 59 13 chr5 157727513 157727842 -41902308 + MER61C LTR ERV1 1 434 0 1711 194 12 58 chr5 157727842 157728271 -41901879 + MER57A-int LTR ERV1 329 737 -6800 2250 114 0 16 chr5 157728290 157728605 -41901545 - AluSx SINE Alu -2 310 1 391 167 10 39 chr5 157728620 157728722 -41901428 + MER57A-int LTR ERV1 744 842 -6695 916 260 25 8 chr5 157728944 157729179 -41900971 + MER34C LTR ERV1 157 395 -190 250 114 0 23 chr5 157729194 157729238 -41900912 + MER57-int LTR ERV1 2757 2799 -3532 830 259 94 16 chr5 157729319 157729574 -41900576 + MER57-int LTR ERV1 1267 1541 -2650 381 244 114 83 chr5 157729597 157729851 -41900299 - LTR48B LTR ERV1 -254 390 129 1921 212 11 41 chr5 157729928 157730391 -41899759 + LTR2 LTR ERV1 1 449 0 356 242 34 34 chr5 157730407 157730420 -41899730 + MER57-int LTR ERV1 1752 1764 -3359 2086 107 0 28 chr5 157730420 157730709 -41899441 + AluSg SINE Alu 14 294 -16 356 242 34 34 chr5 157730709 157730873 -41899277 + MER57-int LTR ERV1 1763 1929 -3194 6234 195 29 55 chr5 157730940 157732887 -41897263 + MER57-int LTR ERV1 1552 5821 -1583 1667 249 18 24 chr5 157733034 157733531 -41896619 + MER57-int LTR ERV1 2450 6147 -1390 1105 176 44 15 chr5 157733533 157733738 -41896412 - L1P3 LINE L1 -5933 864 654 1129 213 5 5 chr5 157833907 157834123 -41796027 - L1P3 LINE L1 -6276 511 296 24 0 0 0 chr5 157834757 157834781 -41795369 + AT_rich Low_complexity Low_complexity 1 24 0 962 204 0 0 chr5 157834965 157835141 -41795009 + FRAM SINE Alu 1 176 0 1918 127 0 0 chr5 157835618 157835893 -41794257 + AluSx SINE Alu 1 275 -37 433 250 116 27 chr5 157836270 157836417 -41793733 - MIR SINE MIR -59 203 45 279 196 0 0 chr5 157836772 157836823 -41793327 - L2 LINE L2 -2 3311 3261 207 0 0 0 chr5 157837009 157837032 -41793118 + (T)n Simple_repeat Simple_repeat 1 23 0 489 276 141 68 chr5 157837590 157838293 -41791857 - L2 LINE L2 0 3313 2547 1021 205 68 0 chr5 157838346 157838580 -41791570 - MER45B DNA AcHobo -44 996 747 1737 188 10 0 chr5 157838879 157839000 -41791150 + AluJo SINE Alu 1 119 -193 197 32 0 32 chr5 157839000 157839031 -41791119 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1737 188 10 0 chr5 157839031 157839212 -41790938 + AluJo SINE Alu 119 306 -6 327 323 87 0 chr5 157839265 157839392 -41790758 - L2 LINE L2 -218 3054 2917 390 229 31 10 chr5 157840193 157840289 -41789861 + MIR SINE MIR 66 163 -99 1195 168 55 0 chr5 157840296 157840498 -41789652 + MLT2B2 LTR ERVL 16 228 -287 2262 85 0 7 chr5 157841206 157841513 -41788637 - AluSc SINE Alu -4 305 1 269 293 27 0 chr5 157841707 157841782 -41788368 + FLAM_A SINE Alu 20 96 -37 368 324 122 32 chr5 157843372 157843619 -41786531 + L2 LINE L2 3013 3281 -32 186 43 0 0 chr5 157843628 157843651 -41786499 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 197 290 65 32 chr5 157844360 157844453 -41785697 - MIR SINE MIR -9 253 158 250 26 51 0 chr5 157844455 157844494 -41785656 + (TCTA)n Simple_repeat Simple_repeat 3 43 0 327 137 0 0 chr5 157846090 157846163 -41783987 + (CA)n Simple_repeat Simple_repeat 2 74 0 267 133 0 0 chr5 157846166 157846211 -41783939 + (TC)n Simple_repeat Simple_repeat 2 46 0 367 318 9 27 chr5 157846259 157846369 -41783781 + MER5A DNA MER1_type 82 189 0 1589 203 104 6 chr5 157846947 157847301 -41782849 + MLT1C LTR MaLR 19 407 -60 387 318 60 13 chr5 157847494 157847645 -41782505 + MIR SINE MIR 8 165 -97 2155 100 0 10 chr5 157847769 157848070 -41782080 + AluSq SINE Alu 1 298 -15 652 153 83 0 chr5 157848109 157848253 -41781897 + L1MD2 LINE L1 6202 6357 -2 192 329 106 0 chr5 157848397 157848482 -41781668 + MIR SINE MIR 169 262 0 309 331 24 24 chr5 157848569 157848693 -41781457 + L1ME4a LINE L1 5808 5931 -190 932 210 127 4 chr5 157848696 157848925 -41781225 + MIR SINE MIR 3 259 -3 359 283 115 36 chr5 157848928 157849094 -41781056 + L1ME4a LINE L1 1175 6095 0 1143 166 0 32 chr5 157849217 157849434 -41780716 + AluJb SINE Alu 77 286 -26 1954 138 0 0 chr5 157849578 157849896 -41780254 - AluSx SINE Alu 0 318 1 1821 254 65 62 chr5 157849978 157850614 -41779536 - L2 LINE L2 -2 3311 2673 1900 168 28 53 chr5 157850614 157851013 -41779137 - MLT1B LTR MaLR -1 389 1 1821 254 65 62 chr5 157851013 157851440 -41778710 - L2 LINE L2 -640 2673 2249 3308 148 38 14 chr5 157851479 157852106 -41778044 - L1MB7 LINE L1 0 6184 5543 215 192 211 0 chr5 157852287 157852339 -41777811 + MIR SINE MIR 156 218 -44 404 267 25 37 chr5 157853856 157854017 -41776133 + MIR SINE MIR 88 246 -16 236 77 0 0 chr5 157854379 157854418 -41775732 - Alu SINE Alu 0 301 263 2620 192 8 74 chr5 157854664 157855257 -41774893 + MLT2B3 LTR ERVL 1 554 0 226 234 195 0 chr5 157855257 157855334 -41774816 + MIR SINE MIR 159 250 -12 23 0 0 0 chr5 157855380 157855403 -41774747 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 157855535 157855556 -41774594 + AT_rich Low_complexity Low_complexity 1 21 0 506 150 49 26 chr5 157855977 157856086 -41774064 - MLT1I LTR MaLR -7 428 305 230 355 11 18 chr5 157856798 157856982 -41773168 - MIR SINE MIR -9 253 36 1447 104 5 5 chr5 157857488 157857700 -41772450 + MER2 DNA MER2_type 49 260 -85 236 238 99 40 chr5 157858408 157858509 -41771641 - L2 LINE L2 -2 3311 3205 241 196 89 0 chr5 157858629 157858685 -41771465 + L2 LINE L2 3248 3308 -5 437 188 256 0 chr5 157860071 157860204 -41769946 - MER5A DNA MER1_type -8 181 15 246 158 35 0 chr5 157860271 157860328 -41769822 + L2 LINE L2 3214 3272 0 2318 83 10 3 chr5 157860483 157860783 -41769367 + AluSg SINE Alu 1 302 -8 1968 139 7 0 chr5 157862878 157863208 -41766942 + AluJb SINE Alu 1 332 0 372 205 195 31 chr5 157863278 157863473 -41766677 + HAL1 LINE L1 2007 2233 -274 2357 225 62 39 chr5 157863597 157863684 -41766466 - L1ME2 LINE L1 -212 5952 5868 4321 50 15 11 chr5 157863684 157864225 -41765925 - L1PA8 LINE L1 -4 6168 5626 2357 225 62 39 chr5 157864225 157865106 -41765044 - L1ME2 LINE L1 -296 5868 4980 241 387 46 17 chr5 157865494 157865667 -41764483 + MIR3 SINE MIR 24 201 -7 366 161 0 0 chr5 157865913 157865969 -41764181 - MER82 DNA MER2_type -174 479 424 203 175 0 0 chr5 157866210 157866250 -41763900 + GA-rich Low_complexity Low_complexity 1 40 0 762 284 121 21 chr5 157867181 157867710 -41762440 - L2 LINE L2 -5 3308 2720 1946 124 57 10 chr5 157867807 157868105 -41762045 + AluSx SINE Alu 1 312 0 1055 246 195 3 chr5 157869012 157869366 -41760784 + LTR16B LTR ERVL 43 464 0 573 330 36 14 chr5 157869366 157869645 -41760505 + HERV16 LTR ERVL 11 295 -4701 2288 108 0 0 chr5 157869680 157869986 -41760164 - AluSc SINE Alu -3 306 1 533 297 109 13 chr5 157870440 157870679 -41759471 + HERV16 LTR ERVL 771 1032 -3964 1335 183 122 11 chr5 157870858 157871137 -41759013 + MER58B DNA MER1_type 28 337 -4 202 301 38 53 chr5 157871140 157871273 -41758877 - L2 LINE L2 -20 3293 3163 1568 114 81 8 chr5 157871318 157871554 -41758596 - AluSx SINE Alu -11 301 49 2475 82 0 3 chr5 157871923 157872229 -41757921 - AluSq SINE Alu -8 305 1 1929 164 0 0 chr5 157872229 157872516 -41757634 - AluSx SINE Alu -13 299 13 2046 136 0 13 chr5 157872630 157872938 -41757212 - AluJo SINE Alu -8 304 1 3127 195 54 12 chr5 157873263 157873915 -41756235 - MER45B DNA AcHobo -361 679 1 264 279 127 0 chr5 157874500 157874579 -41755571 - MER5A DNA MER1_type -5 184 96 198 103 0 0 chr5 157875141 157875170 -41754980 + (T)n Simple_repeat Simple_repeat 1 29 0 667 256 83 0 chr5 157875405 157875585 -41754565 + MIR SINE MIR 2 196 -66 396 0 0 0 chr5 157876410 157876454 -41753696 + (TG)n Simple_repeat Simple_repeat 2 45 0 2353 164 70 5 chr5 157877027 157877455 -41752695 - MLT1D LTR MaLR -47 458 3 2371 274 98 40 chr5 157877465 157878958 -41751192 - L2 LINE L2 -178 3135 1563 385 222 106 44 chr5 157879009 157879189 -41750961 - L2 LINE L2 -2075 1239 1049 248 260 0 60 chr5 157879324 157879424 -41750726 + MER5A DNA MER1_type 45 138 -51 1663 195 3 10 chr5 157880479 157880781 -41749369 - AluJo SINE Alu -12 300 1 350 280 38 15 chr5 157880874 157881006 -41749144 + L2 LINE L2 3179 3313 0 216 67 0 0 chr5 157881597 157881627 -41748523 + (T)n Simple_repeat Simple_repeat 1 30 0 1695 105 143 4 chr5 157882238 157882504 -41747646 + AluSx SINE Alu 3 305 -7 457 250 167 16 chr5 157882872 157883064 -41747086 + MIR SINE MIR 14 234 -28 452 347 40 0 chr5 157883431 157883604 -41746546 - MIR SINE MIR -40 222 43 234 174 0 0 chr5 157884576 157884622 -41745528 + (CAT)n Simple_repeat Simple_repeat 2 47 0 638 271 89 14 chr5 157884645 157884859 -41745291 + MIR SINE MIR 12 241 -21 478 268 39 0 chr5 157885585 157885738 -41744412 + MIR SINE MIR 70 228 -34 22 35 0 0 chr5 157886091 157886120 -41744030 + AT_rich Low_complexity Low_complexity 1 29 0 260 283 70 52 chr5 157886671 157886943 -41743207 + L1ME4a LINE L1 5768 6044 -77 344 241 152 51 chr5 157887770 157887928 -41742222 - MIR SINE MIR -19 243 70 1321 46 7 0 chr5 157889797 157889949 -41740201 - AluSp SINE Alu -160 153 1 203 237 172 0 chr5 157890245 157890338 -41739812 + L2 LINE L2 3197 3305 -8 189 26 51 26 chr5 157892723 157892762 -41737388 + (CAA)n Simple_repeat Simple_repeat 2 41 0 442 306 125 0 chr5 157892776 157892992 -41737158 + MIR SINE MIR 3 245 -17 2327 100 3 0 chr5 157893388 157893688 -41736462 - AluSx SINE Alu -11 301 1 1902 164 0 25 chr5 157895464 157895782 -41734368 - AluSx SINE Alu -2 310 1 395 253 47 28 chr5 157895802 157895992 -41734158 + MIR SINE MIR 28 261 -1 202 250 19 0 chr5 157896171 157896223 -41733927 + L2 LINE L2 3261 3313 0 329 279 12 0 chr5 157896389 157896475 -41733675 - L1MA10 LINE L1 -29 6305 6219 401 297 14 7 chr5 157896676 157896821 -41733329 + L2 LINE L2 3165 3310 -3 1050 198 21 8 chr5 157897131 157897369 -41732781 - L1M4 LINE L1 -759 5387 5147 479 245 5 110 chr5 157897372 157897471 -41732679 - L2 LINE L2 -1066 2248 2179 2263 115 3 10 chr5 157897471 157897784 -41732366 + AluSx SINE Alu 1 311 -1 479 245 5 110 chr5 157897784 157897884 -41732266 - L2 LINE L2 -1135 2179 2070 1054 288 26 58 chr5 157898077 157898529 -41731621 - LTR16B LTR ERVL -26 438 1 960 307 44 19 chr5 157898703 157899255 -41730895 - MERVL LTR ERVL -201 5284 4717 782 342 33 19 chr5 157899281 157899649 -41730501 - MERVL LTR ERVL -1104 4660 4288 2210 124 23 48 chr5 157899649 157900043 -41730107 - MLT1B LTR MaLR 0 390 7 411 280 80 38 chr5 157900043 157900274 -41729876 + ERVL LTR ERVL 3358 3564 -1921 * 507 294 0 39 chr5 157900259 157900439 -41729711 - MERVL LTR ERVL -1459 4305 4133 712 294 122 23 chr5 157900456 157900843 -41729307 - MERVL LTR ERVL -1237 3759 3315 538 88 62 0 chr5 157900843 157900923 -41729227 + L1PA11 LINE L1 6089 6173 -1 712 294 122 23 chr5 157900923 157901011 -41729139 - MERVL LTR ERVL -1681 3315 3237 706 310 27 15 chr5 157900986 157901247 -41728903 - HERV16 LTR ERVL -2148 3506 3243 * 3008 317 55 21 chr5 157901279 157902441 -41727709 - HERV16 LTR ERVL -2067 2929 1603 2213 116 0 3 chr5 157902441 157902742 -41727408 - AluSx SINE Alu -12 300 1 3008 317 55 21 chr5 157902742 157903308 -41726842 - HERV16 LTR ERVL -3393 1603 1058 1700 198 47 97 chr5 157903308 157903878 -41726272 - MLT1F LTR MaLR 0 542 1 1791 122 39 0 chr5 157904026 157904281 -41725869 - AluSq SINE Alu -48 265 1 2237 118 3 0 chr5 157904515 157904812 -41725338 + AluSx SINE Alu 3 300 -12 459 305 86 10 chr5 157904845 157905042 -41725108 - MIR SINE MIR -50 212 1 293 280 27 60 chr5 157905260 157905410 -41724740 + MIR SINE MIR 118 262 0 369 251 66 36 chr5 157906057 157906224 -41723926 - MIR SINE MIR -45 217 46 208 303 13 0 chr5 157908299 157908375 -41721775 + L2 LINE L2 3162 3238 -75 756 251 35 25 chr5 157908734 157908933 -41721217 + MLT1G1 LTR MaLR 1 201 -394 204 275 0 0 chr5 157908935 157908975 -41721175 + polypyrimidine Low_complexity Low_complexity 2 41 0 415 282 99 14 chr5 157909390 157909532 -41720618 - L2 LINE L2 0 3272 3119 581 223 40 7 chr5 157909706 157909854 -41720296 + MIR SINE MIR 100 252 -10 504 183 16 40 chr5 157910453 157910579 -41719571 - LTR67 LTR ERVL -3 554 432 304 259 224 20 chr5 157911077 157911224 -41718926 - MER5B DNA MER1_type 0 178 2 2403 166 39 5 chr5 157911293 157911703 -41718447 + MSTB1 LTR MaLR 1 424 -8 300 272 44 9 chr5 157912179 157912293 -41717857 + L2 LINE L2 2944 3061 -252 966 205 41 0 chr5 157912356 157912527 -41717623 + MER45A DNA AcHobo 1 178 0 216 97 0 0 chr5 157912718 157912749 -41717401 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 245 194 113 0 chr5 157913105 157913158 -41716992 + MLT1L LTR MaLR 505 564 -51 2096 252 58 8 chr5 157913158 157913677 -41716473 - MLT1H1 LTR MaLR -2 553 9 1460 198 44 41 chr5 157913813 157914152 -41715998 - MER58B DNA MER1_type 0 341 2 907 300 39 37 chr5 157914153 157914351 -41715799 + L2 LINE L2 2901 3097 -216 2307 114 0 0 chr5 157914351 157914657 -41715493 - AluSx SINE Alu -6 306 1 907 300 39 37 chr5 157914657 157914868 -41715282 + L2 LINE L2 3097 3311 -2 1204 294 40 52 chr5 157915883 157916403 -41713747 - MLT1K LTR MaLR -62 526 13 180 0 0 0 chr5 157916806 157916826 -41713324 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 2222 104 0 0 chr5 157916826 157917104 -41713046 - AluSg SINE Alu -32 278 1 2146 143 0 3 chr5 157917106 157917414 -41712736 - AluJb SINE Alu -5 307 1 180 250 0 0 chr5 157917683 157917731 -41712419 - L2 LINE L2 -9 3263 3216 373 327 142 44 chr5 157918320 157918638 -41711512 + L2 LINE L2 2919 3267 -5 1297 243 92 63 chr5 157919204 157919436 -41710714 - L2 LINE L2 0 3313 3089 291 28 0 0 chr5 157919436 157919472 -41710678 + (TG)n Simple_repeat Simple_repeat 2 37 0 1297 243 92 63 chr5 157919472 157920102 -41710048 - L2 LINE L2 -224 3089 2423 2331 105 3 0 chr5 157920595 157920891 -41709259 - AluSx SINE Alu -11 301 5 336 280 10 0 chr5 157920951 157921051 -41709099 + MER103 DNA DNA 3 103 -63 627 270 79 88 chr5 157921486 157921905 -41708245 - MLT1J LTR MaLR 0 511 201 562 234 160 11 chr5 157921983 157922171 -41707979 + MIR SINE MIR 32 247 -15 580 304 73 5 chr5 157922704 157922908 -41707242 + MIR SINE MIR 37 254 -8 2219 112 0 3 chr5 157922928 157923231 -41706919 - AluSg SINE Alu -8 302 1 428 173 91 0 chr5 157923258 157923366 -41706784 - L1ME2 LINE L1 -5 6161 6029 397 217 79 66 chr5 157923764 157923916 -41706234 + MLT1K LTR MaLR 364 517 -71 2237 105 7 0 chr5 157924493 157924788 -41705362 - AluSx SINE Alu -15 297 1 244 230 177 9 chr5 157924962 157925075 -41705075 + MIR SINE MIR 75 206 -56 1087 150 0 0 chr5 157925078 157925238 -41704912 - AluSg/x SINE Alu -12 300 141 210 299 0 0 chr5 157925245 157925312 -41704838 + MIR SINE MIR 195 261 -1 21 36 0 0 chr5 157925322 157925350 -41704800 + AT_rich Low_complexity Low_complexity 1 28 0 278 224 0 0 chr5 157925458 157925490 -41704660 + MLT1F LTR MaLR 1 32 -563 406 191 52 13 chr5 157925490 157925616 -41704534 + MLT1F LTR MaLR 1 171 -378 1311 201 125 75 chr5 157925616 157926063 -41704087 - MER66A LTR ERV1 0 599 97 498 226 97 67 chr5 157926130 157926472 -41703678 + MLT1F LTR MaLR 149 542 0 688 153 16 32 chr5 157926691 157926815 -41703335 - FLAM_C SINE Alu -17 126 5 210 250 54 0 chr5 157926987 157927043 -41703107 + L2 LINE L2 3184 3242 -30 321 298 8 58 chr5 157927360 157927481 -41702669 - L2 LINE L2 -22 3250 3136 44 35 0 0 chr5 157928506 157928564 -41701586 + GC_rich Low_complexity Low_complexity 1 58 0 205 360 27 0 chr5 157930271 157930346 -41699804 - L2 LINE L2 -5 3267 3191 5591 149 19 49 chr5 157932203 157933277 -41696873 - L1MC2 LINE L1 -3 6341 5299 1775 183 36 3 chr5 157933277 157933637 -41696513 - L1MB4 LINE L1 -7 6173 5802 5591 149 19 49 chr5 157933637 157933656 -41696494 - L1MC2 LINE L1 -1045 5299 5281 805 133 0 30 chr5 157933944 157934079 -41696071 - FLAM_C SINE Alu -12 131 1 3534 194 25 36 chr5 157934079 157934889 -41695261 - L1MB7 LINE L1 -46 6138 5338 423 293 8 103 chr5 157935022 157935264 -41694886 - MIR SINE MIR -19 243 25 22 0 0 0 chr5 157935771 157935793 -41694357 + AT_rich Low_complexity Low_complexity 1 22 0 510 253 131 59 chr5 157936914 157937302 -41692848 + L2 LINE L2 2561 2976 -338 230 215 62 0 chr5 157937316 157937381 -41692769 + MER112 DNA MER1_type 18 86 -174 432 0 0 0 chr5 157937403 157937451 -41692699 + (TA)n Simple_repeat Simple_repeat 2 49 0 2428 85 3 3 chr5 157937451 157937758 -41692392 - AluSp SINE Alu -6 307 1 2186 106 0 17 chr5 157937987 157938280 -41691870 - AluSx SINE Alu -24 288 1 457 288 16 8 chr5 157938287 157938412 -41691738 + L2 LINE L2 3188 3313 0 233 310 103 0 chr5 157938742 157938858 -41691292 + L2 LINE L2 3184 3311 -2 299 252 9 45 chr5 157939145 157939256 -41690894 + MIR3 SINE MIR 89 195 -13 452 247 68 17 chr5 157939366 157939544 -41690606 + MIR SINE MIR 62 252 -10 1760 86 0 47 chr5 157939605 157939862 -41690288 - AluSc SINE Alu 0 309 65 274 350 8 8 chr5 157940238 157940358 -41689792 - MIR SINE MIR -66 142 23 22 35 0 0 chr5 157940868 157940897 -41689253 + AT_rich Low_complexity Low_complexity 1 29 0 199 295 78 78 chr5 157941871 157942129 -41688021 + L3 LINE CR1 1309 1566 -11 469 239 72 14 chr5 157943251 157943389 -41686761 - MIR SINE MIR -103 159 14 541 281 157 20 chr5 157943632 157943977 -41686173 - L2 LINE L2 -1 3312 2921 293 303 110 21 chr5 157944658 157944803 -41685347 + MIR3 SINE MIR 27 184 -24 332 289 35 0 chr5 157944817 157944931 -41685219 + MIR SINE MIR 137 254 -8 312 275 145 0 chr5 157945077 157945208 -41684942 + L2 LINE L2 3122 3271 -1 782 288 35 4 chr5 157945278 157945504 -41684646 - MIR SINE MIR -29 233 1 2241 82 7 3 chr5 157947080 157947372 -41682778 - AluSg SINE Alu -17 293 1 595 288 77 14 chr5 157947501 157947723 -41682427 + Charlie8 DNA MER1_type 1 236 -2181 541 309 72 8 chr5 157948758 157949007 -41681143 + L2 LINE L2 2823 3087 -226 233 179 0 18 chr5 157949034 157949090 -41681060 + (CA)n Simple_repeat Simple_repeat 2 56 0 407 239 11 0 chr5 157949220 157949312 -41680838 + MIR3 SINE MIR 82 174 -34 729 207 49 0 chr5 157949753 157949917 -41680233 + MER5B DNA MER1_type 1 172 -6 237 309 161 0 chr5 157949965 157950114 -41680036 + MIR3 SINE MIR 33 205 -3 262 319 21 102 chr5 157950160 157950395 -41679755 - L2 LINE L2 -91 3181 2966 1811 139 29 32 chr5 157950805 157951114 -41679036 - AluJb SINE Alu -4 308 1 25 0 0 0 chr5 157951119 157951144 -41679006 + AT_rich Low_complexity Low_complexity 1 25 0 613 234 32 6 chr5 157951145 157951303 -41678847 + MIR SINE MIR 40 201 -61 1847 155 4 7 chr5 157951571 157951848 -41678302 + AluJo SINE Alu 6 281 -31 204 301 133 0 chr5 157951978 157952061 -41678089 - L2 LINE L2 -20 3252 3159 241 305 53 21 chr5 157952294 157952389 -41677761 - MIR SINE MIR -91 117 20 348 292 111 32 chr5 157953536 157953752 -41676398 - Charlie8 DNA MER1_type -2184 233 1 275 278 28 56 chr5 157956640 157956784 -41673366 + MLT1K LTR MaLR 2 141 -447 201 277 121 48 chr5 157956802 157956885 -41673265 + MIR SINE MIR 48 136 -72 1911 95 0 50 chr5 157958129 157958412 -41671738 + AluSg SINE Alu 41 309 -1 1193 284 104 14 chr5 157959392 157959949 -41670201 - L2 LINE L2 -346 2968 2362 586 299 39 35 chr5 157960108 157960446 -41669704 - L1MC4a LINE L1 -1853 5955 5617 198 0 0 0 chr5 157961116 157961138 -41669012 + (TG)n Simple_repeat Simple_repeat 2 23 0 931 278 109 3 chr5 157961806 157962129 -41668021 - L1MC4a LINE L1 -299 5822 5555 2210 96 0 14 chr5 157963413 157963706 -41666444 - AluY SINE Alu -22 289 1 242 318 123 22 chr5 157963792 157964069 -41666081 - L2 LINE L2 -840 2474 2170 693 187 123 7 chr5 157964076 157964231 -41665919 - MER5B DNA MER1_type 0 178 6 793 212 9 51 chr5 157966389 157966606 -41663544 - L1MB8 LINE L1 0 6178 5971 2303 61 0 14 chr5 157966615 157966895 -41663255 - AluY SINE Alu -9 302 27 217 182 36 36 chr5 157967521 157967576 -41662574 + CT-rich Low_complexity Low_complexity 1 55 0 1470 168 30 53 chr5 157967669 157967973 -41662177 - AluJo SINE Alu -15 297 1 1389 199 11 26 chr5 157967997 157968264 -41661886 - AluJo SINE Alu -23 289 27 2305 79 52 0 chr5 157968346 157968636 -41661514 - AluSg SINE Alu -5 305 1 256 198 215 16 chr5 157969398 157969519 -41660631 - L1ME4a LINE L1 -9 6112 5968 290 268 63 24 chr5 157969526 157969653 -41660497 - L1ME4a LINE L1 -257 5864 5733 2285 97 0 23 chr5 157969684 157969992 -41660158 - AluSx SINE Alu -11 301 1 2031 142 32 15 chr5 157970180 157970518 -41659632 - MER2 DNA MER2_type 0 344 1 415 298 96 11 chr5 157970531 157970719 -41659431 - MIR SINE MIR -8 254 51 235 318 71 0 chr5 157970795 157970880 -41659270 + MIR SINE MIR 118 208 -54 518 300 86 15 chr5 157971701 157971968 -41658182 - L2 LINE L2 0 3313 3028 407 313 108 16 chr5 157972159 157972621 -41657529 + L2 LINE L2 2665 3146 -167 1020 59 0 0 chr5 157972774 157972892 -41657258 - AluSc SINE Alu -15 294 177 2076 92 82 0 chr5 157973373 157973655 -41656495 + AluSq SINE Alu 1 305 -8 207 0 0 0 chr5 157974945 157974968 -41655182 + (T)n Simple_repeat Simple_repeat 1 23 0 2212 133 7 0 chr5 157975270 157975579 -41654571 - AluSx SINE Alu -1 311 1 475 271 23 41 chr5 157975655 157975876 -41654274 - MLT1K LTR MaLR -28 560 344 836 194 65 32 chr5 157976650 157976836 -41653314 - MER58C DNA MER1_type 0 215 24 506 211 75 62 chr5 157976840 157977001 -41653149 + MIR SINE MIR 23 185 -77 575 251 184 37 chr5 157977599 157977745 -41652405 + L2 LINE L2 3003 3126 -187 279 0 0 0 chr5 157977745 157977776 -41652374 + (TG)n Simple_repeat Simple_repeat 2 32 0 575 251 184 37 chr5 157977776 157977900 -41652250 + L2 LINE L2 3126 3313 0 544 305 18 0 chr5 157977956 157978120 -41652030 + MIR3 SINE MIR 36 202 -6 187 204 0 23 chr5 157978772 157978816 -41651334 - L2 LINE L2 -557 2757 2715 383 215 314 0 chr5 157979501 157979622 -41650528 - MER5A DNA MER1_type -1 188 30 315 304 158 29 chr5 157979775 157980112 -41650038 + L2 LINE L2 2678 3061 -211 445 284 68 12 chr5 157982193 157982355 -41647795 + MIR SINE MIR 40 210 -52 261 310 62 9 chr5 157983726 157983839 -41646311 - MER5A DNA MER1_type -70 119 1 180 97 0 0 chr5 157984077 157984108 -41646042 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 253 292 133 0 chr5 157984409 157984529 -41645621 - MIR SINE MIR -10 252 117 216 0 0 0 chr5 157984943 157984967 -41645183 + (T)n Simple_repeat Simple_repeat 1 24 0 518 248 150 0 chr5 157985191 157985344 -41644806 + MER5A DNA MER1_type 13 188 -1 247 111 19 19 chr5 157986222 157986276 -41643874 + (TA)n Simple_repeat Simple_repeat 2 55 0 249 271 12 47 chr5 157986477 157986562 -41643588 + L2 LINE L2 3190 3271 -1 335 296 177 16 chr5 157986633 157986819 -41643331 - MIR SINE MIR 0 262 47 186 43 0 0 chr5 157987771 157987794 -41642356 + (TG)n Simple_repeat Simple_repeat 2 24 0 417 255 0 9 chr5 157988775 157988881 -41641269 + MIR SINE MIR 141 245 -17 356 274 8 17 chr5 157989962 157990079 -41640071 - MIR SINE MIR -50 212 97 227 318 24 12 chr5 157991175 157991260 -41638890 + MIR SINE MIR 4 89 -173 505 272 108 22 chr5 157991279 157991511 -41638639 + MIR SINE MIR 11 262 0 286 239 84 0 chr5 157992887 157992958 -41637192 - MER94 DNA DNA -34 100 24 188 256 0 0 chr5 157993544 157993587 -41636563 - MIR SINE MIR -174 88 46 290 318 0 19 chr5 157994637 157994744 -41635406 + MIR SINE MIR 139 243 -19 225 175 0 0 chr5 157995246 157995311 -41634839 + CT-rich Low_complexity Low_complexity 1 65 0 1165 196 136 74 chr5 157995837 157996204 -41633946 + MLT1B LTR MaLR 1 390 0 233 136 76 144 chr5 157996569 157996687 -41633463 - L1ME4a LINE L1 -2 6119 6010 2151 122 6 22 chr5 157996689 157997001 -41633149 - AluSq SINE Alu -6 307 1 26 0 0 0 chr5 157997011 157997037 -41633113 + AT_rich Low_complexity Low_complexity 1 26 0 259 306 135 18 chr5 157997249 157997360 -41632790 + L2 LINE L2 3187 3310 -3 1841 197 34 16 chr5 157997498 157997884 -41632266 - MSTD LTR MaLR -3 393 1 213 139 0 0 chr5 157998243 157998286 -41631864 + (TC)n Simple_repeat Simple_repeat 1 43 0 2289 102 26 0 chr5 157998311 157998616 -41631534 - AluSq SINE Alu 0 313 1 1092 189 51 5 chr5 158000356 158000552 -41629598 + MER6B DNA MER2_type 1 205 -5 359 224 0 44 chr5 158000807 158000925 -41629225 + MIR SINE MIR 103 212 -50 466 146 11 11 chr5 158001141 158001230 -41628920 - MER53 DNA DNA -2 187 99 401 237 44 9 chr5 158001896 158002010 -41628140 - MIR SINE MIR -28 234 117 420 156 13 13 chr5 158002100 158002177 -41627973 + MER116 DNA Mariner 2 78 -2 231 146 0 0 chr5 158002341 158002382 -41627768 + (CTCA)n Simple_repeat Simple_repeat 3 43 0 2334 108 0 0 chr5 158002438 158002743 -41627407 - AluSx SINE Alu -5 307 3 1679 200 45 56 chr5 158002779 158003044 -41627106 - L1ME1 LINE L1 -134 6032 5773 2100 132 6 0 chr5 158003044 158003355 -41626795 - AluSq SINE Alu 0 313 1 1679 200 45 56 chr5 158003355 158003535 -41626615 - L1ME1 LINE L1 -393 5773 5592 1513 193 17 17 chr5 158004047 158004347 -41625803 - AluJb SINE Alu -12 300 1 279 0 0 0 chr5 158004427 158004458 -41625692 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 349 53 0 chr5 158005113 158005245 -41624905 - MIR SINE MIR -32 230 92 2538 84 0 0 chr5 158005903 158006214 -41623936 + AluY SINE Alu 1 311 0 209 231 0 0 chr5 158006354 158006393 -41623757 + T-rich Low_complexity Low_complexity 2 40 0 285 209 0 0 chr5 158007662 158007729 -41622421 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 390 240 47 47 chr5 158007745 158007874 -41622276 - L2 LINE L2 0 3313 3185 268 258 11 54 chr5 158009062 158009155 -41620995 + MIR SINE MIR 139 227 -35 187 256 24 49 chr5 158009349 158009431 -41620719 + MIR SINE MIR 4 83 -179 430 258 8 24 chr5 158009448 158009572 -41620578 - L2 LINE L2 -1 3271 3150 * 431 270 34 34 chr5 158009567 158009715 -41620435 + MIR SINE MIR 112 259 -3 1254 209 3 100 chr5 158010194 158010325 -41619825 - AluJo SINE Alu -2 300 158 1849 119 0 4 chr5 158010325 158010578 -41619572 - AluSx SINE Alu -60 252 1 1254 209 3 100 chr5 158010578 158010777 -41619373 - AluJo SINE Alu -144 158 2 2397 72 0 13 chr5 158010865 158011170 -41618980 - AluY SINE Alu 0 311 11 2125 154 51 0 chr5 158011424 158011795 -41618355 - MLT1B LTR MaLR 0 390 1 820 251 86 21 chr5 158012590 158012833 -41617317 + MIR SINE MIR 2 260 -2 1511 121 0 0 chr5 158012945 158013151 -41616999 - AluSg/x SINE Alu -17 293 88 994 116 0 0 chr5 158013151 158013280 -41616870 - AluSq/x SINE Alu -184 129 1 1663 195 3 10 chr5 158013734 158014036 -41616114 - AluJo SINE Alu -12 300 1 228 364 36 18 chr5 158014125 158014235 -41615915 + L2 LINE L2 3134 3245 -27 767 246 35 25 chr5 158014705 158014904 -41615246 - MLT1G1 LTR MaLR -394 201 1 195 42 0 0 chr5 158015370 158015394 -41614756 + (TCCCC)n Simple_repeat Simple_repeat 4 27 0 549 318 31 14 chr5 158015783 158016006 -41614144 + MIR SINE MIR 25 251 -11 281 267 43 112 chr5 158016145 158016299 -41613851 - MER5A DNA MER1_type -11 178 26 455 323 25 19 chr5 158016357 158016515 -41613635 + MIR3 SINE MIR 19 177 -31 364 285 78 34 chr5 158016595 158016814 -41613336 - MIR SINE MIR 0 262 36 2155 121 7 3 chr5 158017009 158017307 -41612843 - AluSx SINE Alu -13 299 1 477 307 44 35 chr5 158018304 158018517 -41611633 + MIR SINE MIR 20 233 -29 554 234 75 59 chr5 158019235 158019474 -41610676 + MIR SINE MIR 20 262 0 876 254 102 47 chr5 158020376 158020830 -41609320 + MLT1H LTR MaLR 1 549 0 663 270 46 21 chr5 158020899 158021136 -41609014 + L1ME3A LINE L1 5928 6170 0 549 210 79 87 chr5 158021652 158021904 -41608246 + L1ME4a LINE L1 5591 5840 -281 871 122 14 58 chr5 158021923 158022062 -41608088 + AluSq/x SINE Alu 1 133 -180 272 312 87 22 chr5 158022639 158022777 -41607373 - MLT1H LTR MaLR -2 547 401 221 308 0 0 chr5 158022778 158022830 -41607320 + polypyrimidine Low_complexity Low_complexity 4 55 0 988 224 48 24 chr5 158022923 158023173 -41606977 + MIR SINE MIR 7 262 0 491 223 99 0 chr5 158023723 158023844 -41606306 + MER5A DNA MER1_type 57 189 0 550 268 37 0 chr5 158023900 158024064 -41606086 - MIR SINE MIR -34 228 59 232 315 0 0 chr5 158024367 158024456 -41605694 - L1MC4 LINE L1 -1340 6702 6614 268 274 0 32 chr5 158024877 158024972 -41605178 - MIR SINE MIR -43 219 128 1746 182 89 36 chr5 158025065 158025504 -41604646 - MLT1C LTR MaLR 0 467 6 423 276 50 79 chr5 158027249 158027528 -41602622 + L3b LINE CR1 1105 1375 -208 658 253 84 4 chr5 158027820 158028045 -41602105 + MIR SINE MIR 20 262 0 710 296 110 54 chr5 158029022 158029394 -41600756 - LTR16A LTR ERVL -6 444 52 366 333 42 12 chr5 158029417 158029582 -41600568 + MER5A DNA MER1_type 19 188 -1 1889 118 3 93 chr5 158030426 158030758 -41599392 + AluJb SINE Alu 1 302 -10 558 184 57 170 chr5 158031643 158031925 -41598225 - L1MC4 LINE L1 0 8042 7793 479 97 0 28 chr5 158031929 158032001 -41598149 - MADE1 DNA Mariner 0 80 11 364 123 15 31 chr5 158031985 158032050 -41598100 - MADE1 DNA Mariner -16 64 1 * 1894 199 45 99 chr5 158032051 158032919 -41597231 - L1MC4 LINE L1 -264 7778 6927 38 0 0 0 chr5 158034155 158034193 -41595957 + AT_rich Low_complexity Low_complexity 1 38 0 1156 260 91 65 chr5 158034427 158035038 -41595112 - MLT1G1 LTR MaLR 0 590 1 350 264 109 26 chr5 158035169 158035549 -41594601 - L1MEc LINE L1 -4867 1549 1264 194 333 0 0 chr5 158036248 158036326 -41593824 + MIR SINE MIR 164 241 -21 262 261 80 67 chr5 158036428 158036565 -41593585 - MIR3 SINE MIR -49 159 22 2276 105 3 3 chr5 158036708 158037012 -41593138 + AluSx SINE Alu 1 304 -8 440 188 168 0 chr5 158037012 158037113 -41593037 - AluJo/FLAM SINE Alu -184 118 1 232 298 201 41 chr5 158037442 158037752 -41592398 + L2 LINE L2 2715 3085 -187 245 222 0 32 chr5 158138382 158138445 -41491705 + (CATA)n Simple_repeat Simple_repeat 2 62 0 252 167 0 0 chr5 158138852 158138900 -41491250 + CT-rich Low_complexity Low_complexity 1 48 0 301 276 20 61 chr5 158142358 158142456 -41487694 - L1MC4 LINE L1 -1335 6707 6614 233 150 0 50 chr5 158142460 158142520 -41487630 - LTR66 LTR ERVL -171 439 383 1599 179 77 3 chr5 158143942 158144278 -41485872 + MER46B DNA MER2_type 1 236 0 1014 183 50 109 chr5 158145347 158145807 -41484343 - L1MC5 LINE L1 -22 7939 7507 336 273 0 0 chr5 158145887 158145997 -41484153 + CT-rich Low_complexity Low_complexity 2 111 0 238 256 48 60 chr5 158145997 158146165 -41483985 - L1MC5 LINE L1 -465 7496 7331 442 342 97 39 chr5 158146621 158147526 -41482624 + L2 LINE L2 2353 3309 -4 1106 224 42 17 chr5 158148057 158148298 -41481852 + MIR SINE MIR 2 248 -14 2231 115 0 0 chr5 158149136 158149441 -41480709 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr5 158150135 158150156 -41479994 + AT_rich Low_complexity Low_complexity 1 21 0 198 374 33 22 chr5 158150665 158150847 -41479303 - L2 LINE L2 -9 3304 3121 285 250 0 0 chr5 158151354 158151418 -41478732 + L2 LINE L2 3209 3272 0 217 372 55 33 chr5 158151529 158151712 -41478438 + MIR SINE MIR 1 187 -75 2246 119 0 0 chr5 158151777 158152088 -41478062 - AluSq SINE Alu -2 311 1 2271 93 3 13 chr5 158152088 158152398 -41477752 - AluSx SINE Alu -5 307 1 626 318 38 83 chr5 158152602 158153046 -41477104 + L2 LINE L2 2830 3253 -19 189 0 0 0 chr5 158153137 158153158 -41476992 + (TG)n Simple_repeat Simple_repeat 2 22 0 245 95 24 0 chr5 158153234 158153276 -41476874 + Alu SINE Alu 1 43 -265 2727 148 65 10 chr5 158153377 158153899 -41476251 + L1MCa LINE L1 1729 2279 -4147 1220 109 0 0 chr5 158153899 158154073 -41476077 + AluYa8 SINE Alu 129 302 -8 7093 52 20 0 chr5 158154386 158155332 -41474818 - L1PA7 LINE L1 -8 6146 5196 585 255 46 95 chr5 158155408 158155599 -41474551 + L1MEc LINE L1 1820 1990 -4406 6750 37 0 1 chr5 158155599 158156408 -41473742 + L1PA5 LINE L1 5339 6146 -8 585 255 46 95 chr5 158156408 158156541 -41473609 + L1MEc LINE L1 1990 2128 -4268 189 0 0 0 chr5 158157494 158157515 -41472635 + (T)n Simple_repeat Simple_repeat 1 21 0 216 171 73 0 chr5 158157972 158158013 -41472137 - MIR SINE MIR -136 126 83 405 0 0 0 chr5 158158663 158158708 -41471442 + (TG)n Simple_repeat Simple_repeat 2 46 0 526 239 66 66 chr5 158159337 158159504 -41470646 - MIR SINE MIR -94 168 2 1990 147 7 0 chr5 158159691 158159983 -41470167 - AluSx SINE Alu -18 294 1 203 218 39 39 chr5 158160005 158160083 -41470067 - MIR SINE MIR -1 261 184 * 6608 265 60 42 chr5 158160069 158162661 -41467489 - L2 LINE L2 0 3313 673 318 287 84 0 chr5 158162682 158162825 -41467325 - MIR SINE MIR -106 156 2 181 143 29 0 chr5 158162922 158162957 -41467193 - L2 LINE L2 -2 3311 3276 1971 165 0 0 chr5 158162970 158163273 -41466877 + AluSx SINE Alu 1 303 -9 1609 247 40 26 chr5 158163338 158163832 -41466318 + Tigger8 DNA MER2_type 162 662 -4 277 423 22 6 chr5 158163872 158164054 -41466096 - L2 LINE L2 -225 3088 2904 402 319 66 12 chr5 158164397 158164563 -41465587 - L2 LINE L2 0 3313 3139 2481 93 39 8 chr5 158164668 158165032 -41465118 + THE1C LTR MaLR 1 375 0 495 268 16 8 chr5 158165518 158165645 -41464505 - MIR SINE MIR -131 131 4 600 200 93 12 chr5 158165782 158166052 -41464098 - Charlie5 DNA MER1_type -27 2585 18 331 347 35 30 chr5 158167640 158167839 -41462311 + MIR SINE MIR 15 214 -48 206 195 52 0 chr5 158167867 158167944 -41462206 + (TATG)n Simple_repeat Simple_repeat 2 82 0 924 261 21 17 chr5 158168526 158168767 -41461383 + MIR SINE MIR 21 262 0 557 289 73 94 chr5 158169165 158169507 -41460643 - L2 LINE L2 -6 3266 2932 278 228 76 0 chr5 158169900 158169992 -41460158 + MIR3 SINE MIR 67 165 -43 264 307 51 44 chr5 158170934 158171071 -41459079 - MIR3 SINE MIR -63 145 8 452 291 135 0 chr5 158171921 158172062 -41458088 - L2 LINE L2 0 3272 3113 426 241 134 28 chr5 158172166 158172319 -41457831 + MIR SINE MIR 58 216 -46 843 307 12 4 chr5 158173077 158173318 -41456832 - MIR SINE MIR -14 248 6 206 176 20 0 chr5 158173426 158173477 -41456673 + CT-rich Low_complexity Low_complexity 2 53 0 1772 246 12 18 chr5 158173508 158174000 -41456150 - L1MD3 LINE L1 -11 7984 7496 22 0 0 0 chr5 158175191 158175213 -41454937 + AT_rich Low_complexity Low_complexity 1 22 0 1215 150 281 81 chr5 158175630 158175658 -41454492 - L1MC3 LINE L1 -140 7645 7624 1936 174 82 10 chr5 158175658 158176061 -41454089 - MSTB1 LTR MaLR 0 432 1 1215 150 281 81 chr5 158176061 158176413 -41453737 - L1MC3 LINE L1 -161 7624 7189 342 227 45 11 chr5 158176413 158176501 -41453649 - MLT1F1 LTR MaLR -443 124 34 2239 94 0 19 chr5 158176846 158177153 -41452997 - AluSc SINE Alu -8 301 1 242 291 25 13 chr5 158177904 158177983 -41452167 + MIR SINE MIR 112 191 -71 679 366 32 18 chr5 158178205 158178667 -41451483 - L2 LINE L2 0 3313 2842 2501 128 47 2 chr5 158178667 158179073 -41451077 + MSTA LTR MaLR 1 424 -4 679 366 32 18 chr5 158179073 158179155 -41450995 - L2 LINE L2 -471 2842 2763 180 111 0 0 chr5 158179840 158179867 -41450283 + (TTCTCC)n Simple_repeat Simple_repeat 3 29 0 526 295 66 11 chr5 158179995 158180178 -41449972 + MIR SINE MIR 21 213 -49 1534 243 143 20 chr5 158180188 158180738 -41449412 + MLT1G LTR MaLR 1 590 0 1436 294 146 15 chr5 158181099 158181978 -41448172 - L2 LINE L2 -1 3312 2322 529 345 114 17 chr5 158182105 158182640 -41447510 + L2 LINE L2 2709 3312 -1 21 36 0 0 chr5 158182687 158182715 -41447435 + AT_rich Low_complexity Low_complexity 1 28 0 330 328 32 17 chr5 158182843 158182985 -41447165 - MIR SINE MIR -62 146 7 190 393 90 25 chr5 158183628 158183750 -41446400 - L2 LINE L2 -63 3209 3080 * 420 318 27 14 chr5 158183745 158183893 -41446257 + MIR SINE MIR 5 154 -108 597 226 161 18 chr5 158184370 158184587 -41445563 + MIR SINE MIR 15 262 0 1553 125 26 55 chr5 158185056 158185367 -41444783 - L1MA9 LINE L1 0 6312 6011 224 343 0 0 chr5 158185977 158186047 -41444103 + T-rich Low_complexity Low_complexity 1 70 0 1628 84 4 36 chr5 158187235 158187486 -41442664 - AluY SINE Alu -1 310 68 3950 178 32 29 chr5 158187629 158187877 -41442273 - L1MB1 LINE L1 -9 6159 5913 1632 188 30 17 chr5 158187877 158188175 -41441975 - AluJb SINE Alu -10 302 1 3950 178 32 29 chr5 158188175 158188764 -41441386 - L1MB1 LINE L1 -255 5913 5319 292 324 117 21 chr5 158188934 158189079 -41441071 - MIR3 SINE MIR -9 199 41 257 341 81 16 chr5 158190187 158190310 -41439840 + L2 LINE L2 3106 3236 -36 2498 51 3 0 chr5 158190602 158190897 -41439253 - AluY SINE Alu -15 296 1 248 319 128 28 chr5 158191889 158192030 -41438120 - MIR SINE MIR -87 175 21 2540 65 0 0 chr5 158192087 158192395 -41437755 + AluY SINE Alu 1 308 -3 249 33 0 0 chr5 158194278 158194308 -41435842 + (A)n Simple_repeat Simple_repeat 1 30 0 530 292 246 21 chr5 158195063 158195573 -41434577 - L2 LINE L2 0 3313 2698 220 317 73 0 chr5 158195977 158196059 -41434091 + L2 LINE L2 3158 3245 -27 558 194 22 45 chr5 158196103 158196237 -41433913 + MER94 DNA DNA 4 134 0 831 264 114 23 chr5 158196335 158196808 -41433342 - MER113 DNA MER1_type? 0 521 6 1506 208 37 40 chr5 158196832 158197207 -41432943 - MLT1A2 LTR MaLR 0 374 1 27 0 0 0 chr5 158197267 158197294 -41432856 + AT_rich Low_complexity Low_complexity 1 27 0 1604 168 3 35 chr5 158197613 158197899 -41432251 + AluJo SINE Alu 23 299 -13 302 284 101 0 chr5 158198675 158198784 -41431366 + L2 LINE L2 3193 3312 -1 229 302 95 9 chr5 158198861 158198977 -41431173 - MIR SINE MIR -56 206 81 204 158 0 0 chr5 158199281 158199319 -41430831 + (TATG)n Simple_repeat Simple_repeat 2 39 0 255 86 0 0 chr5 158200059 158200094 -41430056 + MADE1 DNA Mariner 1 35 -45 634 310 29 8 chr5 158200299 158200544 -41429606 + MIR SINE MIR 13 262 0 11566 171 70 11 chr5 158201018 158203335 -41426815 + L1MB2 LINE L1 6 2459 -3925 9555 208 50 26 chr5 158203324 158204871 -41425279 + L1MB2 LINE L1 2899 4406 -2001 * 261 0 0 0 chr5 158204871 158204900 -41425250 + (CA)n Simple_repeat Simple_repeat 2 30 0 9555 208 50 26 chr5 158204900 158205267 -41424883 + L1MB2 LINE L1 4406 4762 -1645 1987 140 0 20 chr5 158205267 158205567 -41424583 + AluSq SINE Alu 16 309 -4 9555 208 50 26 chr5 158205567 158207062 -41423088 + L1MB2 LINE L1 4762 6389 -18 234 216 21 31 chr5 158207064 158207161 -41422989 + (TATAA)n Simple_repeat Simple_repeat 4 99 0 429 328 0 0 chr5 158207229 158207360 -41422790 + CT-rich Low_complexity Low_complexity 4 134 0 416 272 194 5 chr5 158209374 158209591 -41420559 - L1MC4a LINE L1 -1926 6276 6019 2099 132 3 0 chr5 158209733 158210029 -41420121 + AluSx SINE Alu 2 298 -14 261 83 0 0 chr5 158210398 158210434 -41419716 + (ATG)n Simple_repeat Simple_repeat 3 38 0 328 341 59 0 chr5 158210563 158210698 -41419452 - MIR3 SINE MIR -9 199 57 7817 246 44 31 chr5 158210743 158211593 -41418557 - L1MC4a LINE L1 -743 5797 4960 2816 22 0 0 chr5 158211593 158211907 -41418243 - AluYb8 SINE Alu -4 314 1 7817 246 44 31 chr5 158211907 158212579 -41417571 - L1MC4a LINE L1 -1580 4960 4298 1806 203 67 11 chr5 158212579 158212954 -41417196 - MSTD LTR MaLR 0 396 1 7817 246 44 31 chr5 158212954 158213753 -41416397 - L1MC4a LINE L1 -2242 4298 3511 1859 57 0 13 chr5 158213753 158213983 -41416167 + AluY SINE Alu 1 227 -84 7817 246 44 31 chr5 158213983 158214018 -41416132 - L1MC4a LINE L1 -3029 3511 3478 1538 125 54 29 chr5 158214018 158214298 -41415852 + AluY SINE Alu 1 287 -24 7817 246 44 31 chr5 158214298 158215071 -41415079 - L1MC4a LINE L1 -3062 3478 2772 3343 207 49 17 chr5 158215071 158215708 -41414442 + MER21B LTR ERV1 1 657 -206 334 148 114 80 chr5 158215713 158215801 -41414349 + MER21B LTR ERV1 772 862 -1 310 369 118 26 chr5 158216108 158216158 -41413992 - L1MC4a LINE L1 -6211 329 285 1138 36 0 0 chr5 158216158 158216297 -41413853 - L1PA5 LINE L1 0 6154 6016 310 369 118 26 chr5 158216297 158216517 -41413633 - L1MC4a LINE L1 -6255 285 34 539 346 67 35 chr5 158216960 158217464 -41412686 - MLT1K LTR MaLR 0 588 2 332 264 0 23 chr5 158219995 158220082 -41410068 - MIR SINE MIR 0 262 178 1035 310 37 39 chr5 158220082 158220547 -41409603 - LTR16B LTR ERVL 0 464 1 358 282 46 53 chr5 158220558 158220689 -41409461 - MIR SINE MIR -117 145 16 25 0 0 50 chr5 158220733 158220755 -41409395 + AT_rich Low_complexity Low_complexity 1 22 -16 1909 126 11 3 chr5 158220755 158221041 -41409109 - AluSg SINE Alu -22 288 1 25 0 0 50 chr5 158221041 158221058 -41409092 + AT_rich Low_complexity Low_complexity 22 38 0 442 324 43 22 chr5 158221112 158221297 -41408853 - MER5A DNA MER1_type 0 189 1 258 285 70 102 chr5 158221303 158221551 -41408599 + MIR SINE MIR 19 257 -5 1668 103 6 139 chr5 158221797 158222128 -41408022 + AluSq SINE Alu 1 287 -26 237 108 0 0 chr5 158222131 158222168 -41407982 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 211 328 0 0 chr5 158222704 158222762 -41407388 + MIR SINE MIR 97 154 -108 24 67 0 0 chr5 158223043 158223088 -41407062 + AT_rich Low_complexity Low_complexity 1 45 0 1749 167 0 52 chr5 158223108 158223437 -41406713 + AluJb SINE Alu 1 312 0 1412 225 77 16 chr5 158224823 158225276 -41404874 + Charlie4a DNA MER1_type 27 507 -1 1997 122 0 4 chr5 158226987 158227265 -41402885 + AluSg SINE Alu 1 277 -33 185 0 40 0 chr5 158227265 158227290 -41402860 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 209 321 223 9 chr5 158228092 158228204 -41401946 - L2 LINE L2 -2 3311 3176 * 289 291 36 9 chr5 158228189 158228299 -41401851 + MIR SINE MIR 138 250 -12 196 222 0 63 chr5 158228355 158228418 -41401732 + L2 LINE L2 3187 3245 -27 747 317 70 17 chr5 158228418 158228702 -41401448 - LTR16A1 LTR ERVL 0 457 179 1874 216 82 15 chr5 158228702 158229175 -41400975 + MLT1D LTR MaLR 1 505 0 747 317 70 17 chr5 158229175 158229288 -41400862 - LTR16A1 LTR ERVL -278 179 73 208 121 0 0 chr5 158229404 158229437 -41400713 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 414 248 41 8 chr5 158230390 158230511 -41399639 - MLT1L LTR MaLR -4 611 487 5626 64 58 0 chr5 158230693 158231429 -41398721 + LTR17 LTR ERV1 2 780 0 739 38 0 19 chr5 158232154 158232259 -41397891 + (TA)n Simple_repeat Simple_repeat 2 104 0 244 324 73 15 chr5 158232697 158232833 -41397317 - MIR SINE MIR -44 218 75 234 81 0 0 chr5 158233008 158233045 -41397105 + (A)n Simple_repeat Simple_repeat 1 37 0 2235 105 0 3 chr5 158234075 158234371 -41395779 + AluSc SINE Alu 6 300 -9 191 35 0 35 chr5 158234988 158235017 -41395133 + (TTTTA)n Simple_repeat Simple_repeat 4 31 0 612 274 29 70 chr5 158235027 158235268 -41394882 - MIR SINE MIR -1 261 31 251 304 61 0 chr5 158236815 158236930 -41393220 + MIR3 SINE MIR 35 156 -52 311 378 62 26 chr5 158237508 158237847 -41392303 + L3b LINE CR1 1102 1452 -131 216 0 0 0 chr5 158238087 158238111 -41392039 + (T)n Simple_repeat Simple_repeat 1 24 0 1881 159 7 83 chr5 158238397 158238643 -41391507 + MLT1B LTR MaLR 1 203 -187 2317 107 0 0 chr5 158238643 158238951 -41391199 + AluSc SINE Alu 1 308 -1 1881 159 7 83 chr5 158238951 158239126 -41391024 + MLT1B LTR MaLR 203 390 0 186 296 148 46 chr5 158240153 158240349 -41389801 + L2 LINE L2 2829 3044 -228 631 289 164 4 chr5 158240560 158240785 -41389365 - MIR SINE MIR 0 262 2 183 156 0 0 chr5 158240881 158240913 -41389237 + (CTG)n Simple_repeat Simple_repeat 2 33 0 204 40 0 0 chr5 158241864 158241889 -41388261 + (GGGTG)n Simple_repeat Simple_repeat 4 28 0 255 295 95 37 chr5 158242023 158242189 -41387961 - MIR SINE MIR -38 170 16 2946 121 5 5 chr5 158243191 158243639 -41386511 - L1MA4A LINE L1 -329 5974 5527 40 73 0 0 chr5 158243665 158243747 -41386403 + AT_rich Low_complexity Low_complexity 1 82 0 397 233 93 67 chr5 158244260 158244296 -41385854 + MIR SINE MIR 109 143 -119 710 104 0 0 chr5 158244296 158244402 -41385748 + L1PA5 LINE L1 6045 6150 -4 397 233 93 67 chr5 158244402 158244515 -41385635 + MIR SINE MIR 143 262 0 456 261 86 49 chr5 158244532 158244777 -41385373 + L1ME4a LINE L1 5615 5868 -253 246 268 0 0 chr5 158245151 158245207 -41384943 - L2 LINE L2 -5 3267 3212 278 291 117 39 chr5 158246951 158247157 -41382993 - MIR SINE MIR 0 262 41 24 0 0 0 chr5 158248517 158248541 -41381609 + AT_rich Low_complexity Low_complexity 1 24 0 586 302 79 5 chr5 158248662 158248851 -41381299 - MIR SINE MIR -6 256 54 2176 128 0 6 chr5 158249609 158249922 -41380228 - AluSq SINE Alu -2 311 1 2273 107 0 0 chr5 158249936 158250235 -41379915 - AluSc SINE Alu -10 299 1 284 271 12 24 chr5 158250462 158250547 -41379603 + MER5A DNA MER1_type 1 84 -105 206 284 15 30 chr5 158250608 158250675 -41379475 + L2 LINE L2 2755 2820 -494 312 328 57 8 chr5 158250980 158251102 -41379048 + L2 LINE L2 3144 3271 -1 27 0 0 0 chr5 158251964 158251991 -41378159 + AT_rich Low_complexity Low_complexity 1 27 0 257 207 0 17 chr5 158252168 158252226 -41377924 + L2 LINE L2 3257 3313 0 481 275 58 37 chr5 158252242 158252445 -41377705 - MIR SINE MIR 0 262 64 23 68 0 0 chr5 158253018 158253062 -41377088 + AT_rich Low_complexity Low_complexity 1 44 0 27 0 0 0 chr5 158253614 158253641 -41376509 + AT_rich Low_complexity Low_complexity 1 27 0 210 158 0 0 chr5 158253850 158253888 -41376262 + T-rich Low_complexity Low_complexity 2 39 0 2179 121 3 0 chr5 158253974 158254264 -41375886 - AluSq SINE Alu -22 291 1 357 351 76 12 chr5 158254373 158254544 -41375606 + MER5A DNA MER1_type 7 188 -1 206 308 56 47 chr5 158254544 158254627 -41375523 - MIR3 SINE MIR -58 150 67 21 0 0 0 chr5 158255049 158255070 -41375080 + AT_rich Low_complexity Low_complexity 1 21 0 693 322 70 49 chr5 158255398 158255824 -41374326 + MLT1K LTR MaLR 139 573 -15 280 257 171 7 chr5 158256034 158256174 -41373976 - L1MC5 LINE L1 -48 7913 7751 926 311 83 12 chr5 158256424 158256855 -41373295 - LTR16B LTR ERVL -2 462 1 282 396 28 0 chr5 158256889 158256995 -41373155 + MIR SINE MIR 3 111 -151 5247 87 14 1 chr5 158257481 158258203 -41371947 + L1PA10 LINE L1 5438 6168 0 470 307 91 83 chr5 158258335 158259023 -41371127 + L2 LINE L2 2553 3271 -1 246 174 0 0 chr5 158259801 158259847 -41370303 + A-rich Low_complexity Low_complexity 1 46 0 503 304 110 18 chr5 158260812 158261147 -41369003 - L1MC4a LINE L1 -1911 5897 5532 183 292 73 42 chr5 158261175 158261271 -41368879 + L2 LINE L2 3138 3236 -36 207 88 0 0 chr5 158261613 158261647 -41368503 + (T)n Simple_repeat Simple_repeat 1 34 0 2197 115 7 0 chr5 158263241 158263545 -41366605 + AluSq SINE Alu 1 306 -7 195 316 0 0 chr5 158263609 158263666 -41366484 - L2 LINE L2 0 3272 3216 361 291 20 33 chr5 158263722 158263873 -41366277 - MIR SINE MIR 0 262 114 539 290 106 73 chr5 158265146 158265870 -41364280 + HAL1 LINE L1 1 748 -1759 2383 101 58 3 chr5 158265881 158266226 -41363924 - THE1B LTR MaLR 0 364 1 421 256 92 105 chr5 158266534 158266971 -41363179 - MLT1H LTR MaLR -24 525 95 247 232 144 88 chr5 158267415 158267540 -41362610 + MIR SINE MIR 59 190 -72 452 338 67 4 chr5 158267648 158267873 -41362277 - MIR SINE MIR 0 262 24 1723 195 0 10 chr5 158267879 158268186 -41361964 - AluJo SINE Alu -4 308 5 218 293 93 0 chr5 158268346 158268421 -41361729 - L2 LINE L2 -17 3296 3215 301 292 219 31 chr5 158268546 158268971 -41361179 - L2 LINE L2 -5 3308 2804 31 26 0 0 chr5 158270086 158270124 -41360026 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr5 158270261 158270290 -41359860 + AT_rich Low_complexity Low_complexity 1 29 0 258 276 40 40 chr5 158270330 158270482 -41359668 - L1ME LINE L1 -458 5663 5512 237 357 62 9 chr5 158270792 158270904 -41359246 + L2 LINE L2 2949 3066 -247 568 260 216 0 chr5 158270918 158271099 -41359051 + MIR SINE MIR 8 227 -35 408 302 215 15 chr5 158271404 158271609 -41358541 + MIR SINE MIR 1 246 -16 646 291 99 5 chr5 158272229 158272442 -41357708 - MIR SINE MIR -13 249 17 184 255 39 20 chr5 158272606 158272657 -41357493 - MIR SINE MIR -9 253 202 200 94 0 31 chr5 158272815 158272847 -41357303 + (TTCC)n Simple_repeat Simple_repeat 4 34 0 233 292 28 14 chr5 158272850 158272922 -41357228 - L2 LINE L2 -1 3271 3199 2317 75 41 0 chr5 158273243 158273535 -41356615 + AluY SINE Alu 1 304 -7 1445 171 70 65 chr5 158273653 158273880 -41356270 + MLT1A2 LTR MaLR 17 249 -125 2160 91 18 0 chr5 158273880 158274191 -41355959 + AluSq SINE Alu 3 318 0 1445 171 70 65 chr5 158274191 158274318 -41355832 + MLT1A2 LTR MaLR 249 374 0 14376 37 1 2 chr5 158275156 158277013 -41353137 - L1PA3 LINE L1 -1464 4682 2828 7630 25 1 0 chr5 158277014 158278473 -41351677 + L1PA3 LINE L1 4686 6150 -5 526 279 8 0 chr5 158278662 158278784 -41351366 - L2 LINE L2 0 3313 3191 7000 117 9 5 chr5 158278821 158280177 -41349973 - L1MA1 LINE L1 -1 6301 4943 544 216 129 0 chr5 158280242 158280381 -41349769 + MER3 DNA MER1_type 53 209 0 2095 97 0 0 chr5 158280423 158280692 -41349458 + AluSq SINE Alu 1 269 -44 275 231 26 0 chr5 158280742 158280820 -41349330 - L2 LINE L2 -312 3001 2922 321 279 112 68 chr5 158281432 158281593 -41348557 - MIR SINE MIR -91 171 4 341 277 54 18 chr5 158282346 158282458 -41347692 + MIR SINE MIR 9 124 -138 27 29 0 0 chr5 158283511 158283545 -41346605 + AT_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr5 158283820 158283850 -41346300 + AT_rich Low_complexity Low_complexity 1 30 0 4446 145 47 9 chr5 158284421 158285282 -41344868 + L1MA8 LINE L1 5398 6290 -1 434 316 64 21 chr5 158286484 158286718 -41343432 + MIR SINE MIR 8 251 -11 770 313 0 0 chr5 158288037 158288251 -41341899 - MIR SINE MIR 0 262 49 206 167 37 37 chr5 158288634 158288688 -41341462 + MIR SINE MIR 90 143 -65 224 212 15 0 chr5 158289916 158289982 -41340168 + CT-rich Low_complexity Low_complexity 4 70 0 255 319 31 81 chr5 158290292 158290452 -41339698 + MER91A DNA MER1_type 1 152 -44 234 327 53 35 chr5 158290613 158290726 -41339424 - L2 LINE L2 -11 3261 3147 293 338 0 0 chr5 158290765 158290842 -41339308 - L2 LINE L2 -229 3043 2967 1701 192 0 31 chr5 158291025 158291343 -41338807 - AluJo SINE Alu -4 308 1 271 345 0 0 chr5 158291344 158291428 -41338722 + MER5B DNA MER1_type 36 119 -59 1453 223 54 11 chr5 158291719 158292069 -41338081 - MLT1A1 LTR MaLR 0 365 1 1021 196 33 9 chr5 158292685 158292899 -41337251 + MER20 DNA MER1_type 1 219 0 3543 55 8 41 chr5 158293204 158293546 -41336604 - L1PA7 LINE L1 -1 6153 5830 2348 89 0 0 chr5 158293546 158293839 -41336311 - AluSg SINE Alu -17 293 1 3543 55 8 41 chr5 158293839 158293989 -41336161 - L1PA7 LINE L1 -324 5830 5677 2884 29 0 0 chr5 158294018 158294359 -41335791 - L1PA3 LINE L1 -5 6150 5810 577 94 0 10 chr5 158294359 158294444 -41335706 - L1PA7 LINE L1 -481 5673 5588 378 0 0 0 chr5 158295016 158295058 -41335092 + (TG)n Simple_repeat Simple_repeat 1 42 0 226 296 28 37 chr5 158295082 158295190 -41334960 + MIR3 SINE MIR 93 199 -9 192 125 0 0 chr5 158295191 158295223 -41334927 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 419 289 102 73 chr5 158295568 158295814 -41334336 + MIR SINE MIR 4 256 -6 482 330 16 38 chr5 158295822 158296043 -41334107 + MIR SINE MIR 2 218 -44 1945 124 37 0 chr5 158296180 158296453 -41333697 + AluSx SINE Alu 2 284 -28 28 0 0 0 chr5 158298454 158298482 -41331668 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr5 158298536 158298559 -41331591 + (GA)n Simple_repeat Simple_repeat 2 24 0 195 284 42 74 chr5 158299591 158299686 -41330464 + MIR SINE MIR 7 98 -164 801 148 4 0 chr5 158300804 158301040 -41329110 - L1PA16 LINE L1 0 6166 5881 231 226 0 48 chr5 158301075 158301137 -41329013 + MIR SINE MIR 130 188 -74 2155 229 40 31 chr5 158301303 158301874 -41328276 + MLT1E2 LTR MaLR 51 626 0 340 291 99 35 chr5 158301875 158302047 -41328103 - MIR SINE MIR -32 230 48 242 225 14 70 chr5 158302870 158302941 -41327209 - MER113 DNA MER1_type? 0 521 455 399 308 108 0 chr5 158303604 158303724 -41326426 - MIR3 SINE MIR -11 197 65 556 52 26 0 chr5 158304004 158304081 -41326069 - MADE1 DNA Mariner 0 80 2 216 296 42 0 chr5 158304535 158304606 -41325544 + MIR SINE MIR 72 145 -63 452 314 103 14 chr5 158305221 158305444 -41324706 + MIR SINE MIR 17 259 -3 239 258 76 0 chr5 158305458 158305524 -41324626 - L2 LINE L2 -1 3312 3242 249 329 195 49 chr5 158305662 158306324 -41323826 - L2 LINE L2 -177 3095 2334 286 275 58 22 chr5 158306532 158306670 -41323480 - L1ME4a LINE L1 -4 6117 5975 427 185 0 11 chr5 158306963 158307055 -41323095 - MLT1D LTR MaLR 0 505 415 831 222 54 25 chr5 158307070 158307309 -41322841 - MLT1D LTR MaLR -258 247 2 229 49 0 49 chr5 158308895 158308936 -41321214 + (TTCC)n Simple_repeat Simple_repeat 1 39 0 1689 106 30 53 chr5 158308936 158309201 -41320949 - AluSx SINE Alu -20 292 34 386 291 44 0 chr5 158310430 158310588 -41319562 - Charlie8 DNA MER1_type -2146 271 107 256 326 29 22 chr5 158312480 158312618 -41317532 + L3b LINE CR1 1327 1465 -118 549 233 7 7 chr5 158313178 158313328 -41316822 + L1PA16 LINE L1 4219 4368 -1778 3944 144 52 9 chr5 158313435 158314306 -41315844 + L1PA16 LINE L1 4663 5495 -671 2482 151 21 16 chr5 158314306 158314730 -41315420 - MSTB LTR MaLR 0 426 1 3944 144 52 9 chr5 158314730 158314939 -41315211 + L1PA16 LINE L1 5495 5694 -472 285 29 0 0 chr5 158314939 158314973 -41315177 + (CATA)n Simple_repeat Simple_repeat 3 36 0 3944 144 52 9 chr5 158314973 158315102 -41315048 + L1PA16 LINE L1 5694 5924 -242 351 349 32 0 chr5 158315411 158315537 -41314613 + L2 LINE L2 3182 3311 -2 28 19 0 56 chr5 158317626 158317680 -41312470 + AT_rich Low_complexity Low_complexity 1 51 0 24 0 0 0 chr5 158318485 158318509 -41311641 + AT_rich Low_complexity Low_complexity 1 24 0 400 339 61 17 chr5 158320162 158320204 -41309946 - MIR SINE MIR -3 259 220 1542 171 20 40 chr5 158320204 158320503 -41309647 - AluJb SINE Alu -19 293 1 400 339 61 17 chr5 158320503 158320690 -41309460 - MIR SINE MIR -42 220 20 270 281 4 0 chr5 158321093 158321184 -41308966 - MIR SINE MIR -59 149 57 2600 38 0 13 chr5 158321292 158321607 -41308543 - AluY SINE Alu 0 311 1 321 263 161 82 chr5 158321994 158322249 -41307901 - L2 LINE L2 -4 3309 3035 3287 157 6 8 chr5 158322430 158322958 -41307192 + MER1A DNA MER1_type 1 527 0 2671 60 3 8 chr5 158323752 158324103 -41306047 - L1PA7 LINE L1 0 6154 5806 233 269 0 0 chr5 158324370 158324422 -41305728 + L2 LINE L2 3259 3310 -3 344 357 14 7 chr5 158324748 158324888 -41305262 + MIR3 SINE MIR 3 143 -65 494 263 90 104 chr5 158325441 158325817 -41304333 - L2 LINE L2 -355 2959 2589 303 282 20 40 chr5 158325817 158325966 -41304184 + MLT1I LTR MaLR 1 146 -263 370 236 76 28 chr5 158326157 158326301 -41303849 + MLT1I LTR MaLR 258 408 -1 209 292 15 0 chr5 158326847 158326912 -41303238 + (TATATG)n Simple_repeat Simple_repeat 5 70 0 327 150 0 0 chr5 158327227 158327287 -41302863 + (T)n Simple_repeat Simple_repeat 1 60 0 2173 133 26 32 chr5 158327838 158328215 -41301935 + THE1C LTR MaLR 1 375 0 1089 154 11 11 chr5 158328286 158328474 -41301676 + MER5A DNA MER1_type 1 188 -1 916 228 94 0 chr5 158329177 158329379 -41300771 + MER58A DNA MER1_type 1 221 -3 189 0 0 0 chr5 158330226 158330247 -41299903 + (TA)n Simple_repeat Simple_repeat 1 21 0 6091 30 0 5 chr5 158330248 158331001 -41299149 - L1PA5 LINE L1 -11 6143 5395 884 45 0 0 chr5 158331001 158331113 -41299037 + L1P LINE L1 4641 4752 -1394 216 0 0 0 chr5 158332021 158332045 -41298105 + (TC)n Simple_repeat Simple_repeat 2 25 0 185 277 15 31 chr5 158333871 158333936 -41296214 - MIR3 SINE MIR -2 206 143 * 1204 303 74 38 chr5 158333924 158334476 -41295674 - L2 LINE L2 -24 3289 2712 24 53 0 0 chr5 158334532 158334570 -41295580 + AT_rich Low_complexity Low_complexity 1 38 0 293 293 65 24 chr5 158335140 158335263 -41294887 - MIR SINE MIR -115 147 20 * 314 257 105 0 chr5 158335261 158335366 -41294784 - L2 LINE L2 -5 3308 3193 438 291 126 30 chr5 158335791 158335990 -41294160 + MIR SINE MIR 3 220 -42 1683 218 90 34 chr5 158336136 158336531 -41293619 - MLT1D LTR MaLR 0 505 77 1609 171 60 97 chr5 158336531 158337016 -41293134 + MLT1C LTR MaLR 1 467 0 1683 218 90 34 chr5 158337016 158337098 -41293052 - MLT1D LTR MaLR -428 77 1 186 182 23 45 chr5 158337987 158338031 -41292119 + L3b LINE CR1 1296 1338 -245 332 256 167 8 chr5 158338345 158338526 -41291624 - MIR SINE MIR -5 257 5 393 275 34 39 chr5 158338728 158338906 -41291244 - L3b LINE CR1 -192 1391 1215 27 0 0 0 chr5 158339752 158339779 -41290371 + AT_rich Low_complexity Low_complexity 1 27 0 641 152 14 41 chr5 158340702 158340847 -41289303 - L1PA15 LINE L1 -2 6163 6023 4627 62 7 5 chr5 158340869 158341478 -41288672 - L1PA8 LINE L1 -9 6163 5554 411 336 225 5 chr5 158341975 158342420 -41287730 + L2 LINE L2 2716 3263 -50 239 359 102 8 chr5 158342454 158342582 -41287568 + MIR3 SINE MIR 28 167 -41 644 311 66 73 chr5 158342773 158342910 -41287240 - L2 LINE L2 -2 3270 3134 1477 113 164 16 chr5 158342910 158343191 -41286959 + AluSg1 SINE Alu 1 309 0 644 311 66 73 chr5 158343191 158343491 -41286659 - L2 LINE L2 -138 3134 2836 478 176 0 0 chr5 158344242 158344327 -41285823 + MLT1B LTR MaLR 21 105 -285 4800 179 22 16 chr5 158344327 158345937 -41284213 + L1MA4 LINE L1 4444 6061 -239 2177 111 0 14 chr5 158345937 158346234 -41283916 + AluSx SINE Alu 1 293 -19 4800 179 22 16 chr5 158346234 158346472 -41283678 + L1MA4 LINE L1 6061 6296 -4 1331 148 140 4 chr5 158346487 158346751 -41283399 + MLT1B LTR MaLR 91 390 0 1787 216 31 5 chr5 158347403 158347788 -41282362 - MSTD LTR MaLR -1 395 1 306 335 102 11 chr5 158347812 158347988 -41282162 + MLT1K LTR MaLR 375 566 -22 429 342 148 5 chr5 158348468 158348664 -41281486 - MIR SINE MIR -9 253 30 3149 213 44 36 chr5 158349043 158350300 -41279850 - L1MB5 LINE L1 -6 6168 4896 4838 92 4 47 chr5 158350300 158351019 -41279131 - LTR12 LTR ERV1 0 688 1 3149 213 44 36 chr5 158351019 158351085 -41279065 - L1MB5 LINE L1 -1278 4896 4832 231 333 13 0 chr5 158351485 158351560 -41278590 + L2 LINE L2 2668 2743 -571 591 216 77 26 chr5 158352106 158352300 -41277850 + MER3 DNA MER1_type 1 204 -5 427 274 68 0 chr5 158352471 158352588 -41277562 - L2 LINE L2 0 3313 3189 419 238 59 0 chr5 158352590 158352691 -41277459 - MER20 DNA MER1_type -2 217 111 606 40 0 0 chr5 158352787 158352861 -41277289 + L1PA5 LINE L1 6073 6146 -8 198 0 0 0 chr5 158352963 158352985 -41277165 + (TG)n Simple_repeat Simple_repeat 1 22 0 189 0 0 0 chr5 158353700 158353721 -41276429 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 314 282 40 29 chr5 158355153 158355327 -41274823 + L1ME4a LINE L1 5733 5908 -213 946 329 63 5 chr5 158355481 158355918 -41274232 - L2 LINE L2 -270 3043 2579 760 246 11 6 chr5 158355970 158356149 -41274001 + MER20 DNA MER1_type 40 219 0 330 328 17 0 chr5 158356178 158356294 -41273856 - L2 LINE L2 -743 2571 2454 1192 87 6 22 chr5 158356319 158356502 -41273648 + MER30B DNA MER1_type 7 186 -4 266 248 43 57 chr5 158356512 158356630 -41273520 - MIR SINE MIR -135 73 1 344 364 106 14 chr5 158356909 158357021 -41273129 + L2 LINE L2 2735 2835 -479 1128 220 110 48 chr5 158357021 158357394 -41272756 - MSTD LTR MaLR 0 396 1 5914 237 77 28 chr5 158357394 158359047 -41271103 - MSTD-int LTR MaLR 0 1735 2 1511 219 55 31 chr5 158359049 158359433 -41270717 - MSTD LTR MaLR 0 396 4 344 364 106 14 chr5 158359433 158359533 -41270617 + L2 LINE L2 2835 2971 -343 524 266 108 0 chr5 158360066 158360224 -41269926 - MER5B DNA MER1_type -3 175 1 339 245 170 38 chr5 158360336 158360495 -41269655 + MIR SINE MIR 70 249 -13 267 208 14 28 chr5 158361694 158361766 -41268384 - MLT1K LTR MaLR 0 588 518 419 315 56 61 chr5 158361993 158362190 -41267960 - MLT1K LTR MaLR -348 240 45 220 289 11 56 chr5 158362256 158362346 -41267804 - L2 LINE L2 -64 3208 3123 204 309 0 0 chr5 158362376 158362431 -41267719 + A-rich Low_complexity Low_complexity 1 55 0 25 0 0 0 chr5 158362731 158362756 -41267394 + AT_rich Low_complexity Low_complexity 1 25 0 605 250 0 8 chr5 158362908 158363036 -41267114 + MIR3 SINE MIR 34 160 -48 305 155 357 0 chr5 158363037 158363121 -41267029 + MER117 DNA MER1_type 2 115 -82 372 317 32 27 chr5 158363997 158364183 -41265967 - MER5A DNA MER1_type -1 188 2 477 282 81 0 chr5 158364745 158364919 -41265231 - MIR SINE MIR -16 246 59 28 48 0 0 chr5 158365344 158365386 -41264764 + AT_rich Low_complexity Low_complexity 1 42 0 304 357 23 8 chr5 158365511 158365640 -41264510 - MIR SINE MIR -112 150 20 459 287 98 57 chr5 158365736 158366150 -41264000 - Charlie8 DNA MER1_type -2189 228 1 329 287 37 52 chr5 158367738 158367874 -41262276 + MIR SINE MIR 61 194 -68 554 305 133 13 chr5 158367925 158368240 -41261910 - L1MC4a LINE L1 -1899 5909 5557 330 123 0 0 chr5 158368352 158368409 -41261741 + (TG)n Simple_repeat Simple_repeat 2 58 0 214 211 18 35 chr5 158368987 158369044 -41261106 + MIR3 SINE MIR 7 62 -146 189 286 0 150 chr5 158369076 158369139 -41261011 + MIR SINE MIR 46 80 -182 2232 101 0 3 chr5 158369139 158369437 -41260713 - AluSg SINE Alu -13 297 1 189 286 0 150 chr5 158369437 158369506 -41260644 + MIR SINE MIR 80 158 -104 260 309 65 14 chr5 158369511 158369650 -41260500 - LTR67 LTR ERVL -1 556 411 445 269 54 8 chr5 158369987 158370117 -41260033 + MIR SINE MIR 125 260 -2 283 311 160 8 chr5 158370258 158370377 -41259773 + MIR3 SINE MIR 58 194 -14 1122 172 74 46 chr5 158370420 158370745 -41259405 + MER33 DNA MER1_type 1 323 -1 701 269 134 70 chr5 158370794 158371308 -41258842 - MLT1K LTR MaLR 0 588 42 242 347 40 0 chr5 158422351 158422475 -41207675 - MIR SINE MIR -13 249 121 515 326 58 18 chr5 158422567 158422791 -41207359 + MIR SINE MIR 30 262 0 390 308 41 27 chr5 158423138 158423284 -41206866 + MIR SINE MIR 1 148 -114 999 210 36 0 chr5 158423296 158423491 -41206659 + MER20 DNA MER1_type 1 202 -17 696 170 0 0 chr5 158423590 158423725 -41206425 + CT-rich Low_complexity Low_complexity 1 135 0 181 310 169 0 chr5 158424014 158424085 -41206065 + MIR SINE MIR 175 257 -5 338 91 18 0 chr5 158424103 158424158 -41205992 + (TC)n Simple_repeat Simple_repeat 1 56 0 185 277 125 9 chr5 158424355 158424467 -41205683 + MIR3 SINE MIR 65 189 -19 2031 103 4 0 chr5 158424797 158425068 -41205082 - AluSq SINE Alu -41 272 1 24 0 0 0 chr5 158425364 158425388 -41204762 + AT_rich Low_complexity Low_complexity 1 24 0 330 272 63 134 chr5 158425600 158425839 -41204311 + MIR SINE MIR 41 262 0 184 68 55 55 chr5 158425881 158425954 -41204196 + (TA)n Simple_repeat Simple_repeat 1 73 0 224 274 72 98 chr5 158426392 158426545 -41203605 - L2 LINE L2 0 3272 3124 855 213 163 39 chr5 158426819 158427077 -41203073 + LTR50 LTR ERVL 1 290 -505 723 248 121 36 chr5 158427098 158427405 -41202745 + LTR50 LTR ERVL 462 794 -1 491 331 0 0 chr5 158428585 158428730 -41201420 - MIR SINE MIR -55 207 63 220 208 0 57 chr5 158428800 158428853 -41201297 - L2 LINE L2 0 3272 3223 2003 133 10 16 chr5 158429911 158430220 -41199930 + AluSx SINE Alu 3 309 -3 298 287 44 22 chr5 158431473 158431609 -41198541 - MLT1K LTR MaLR -2 586 448 388 301 48 27 chr5 158431947 158432093 -41198057 + MIR SINE MIR 48 196 -66 502 295 128 18 chr5 158432224 158432451 -41197699 - MIR SINE MIR -8 254 3 536 340 41 44 chr5 158433754 158434142 -41196008 - L3b LINE CR1 -83 1500 1114 463 379 6 6 chr5 158437504 158437686 -41192464 - MER5A DNA MER1_type -1 188 7 186 133 0 0 chr5 158437916 158437946 -41192204 + (TG)n Simple_repeat Simple_repeat 1 30 0 225 94 0 0 chr5 158438376 158438408 -41191742 + (A)n Simple_repeat Simple_repeat 1 32 0 1127 195 29 0 chr5 158439624 158439834 -41190316 + MER20 DNA MER1_type 3 218 -1 213 349 0 0 chr5 158440685 158440748 -41189402 - L2 LINE L2 0 3313 3251 714 299 20 20 chr5 158440873 158441117 -41189033 - MIR SINE MIR -4 258 15 182 136 23 0 chr5 158441694 158441738 -41188412 + (TG)n Simple_repeat Simple_repeat 2 46 0 222 244 0 0 chr5 158441758 158441840 -41188310 + (TA)n Simple_repeat Simple_repeat 1 82 0 28 0 0 0 chr5 158443056 158443084 -41187066 + AT_rich Low_complexity Low_complexity 1 28 0 600 319 0 11 chr5 158444922 158445107 -41185043 + MIR SINE MIR 65 247 -15 216 0 0 0 chr5 158445485 158445509 -41184641 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 202 217 226 96 chr5 158449197 158449312 -41180838 + MER5A DNA MER1_type 60 189 0 13025 198 41 12 chr5 158449465 158451426 -41178724 + L1PB3 LINE L1 2443 4345 -2525 468 0 0 0 chr5 158451426 158451478 -41178672 + (TC)n Simple_repeat Simple_repeat 2 53 0 297 0 0 0 chr5 158451477 158451510 -41178640 + (TA)n Simple_repeat Simple_repeat 1 33 0 * 13025 198 41 12 chr5 158451478 158451655 -41178495 + L1PB3 LINE L1 4345 4515 -2355 1228 219 42 52 chr5 158451655 158451942 -41178208 + AluJb SINE Alu 1 284 -18 198 0 0 0 chr5 158451943 158451965 -41178185 + (CA)n Simple_repeat Simple_repeat 1 22 0 13025 198 41 12 chr5 158451965 158454151 -41175999 + L1PB3 LINE L1 4514 6869 -1 326 77 58 0 chr5 158454180 158454232 -41175918 - L1P LINE L1 -1913 4233 4179 23740 51 5 3 chr5 158454241 158458059 -41172091 - L1PA5 LINE L1 -3 6151 2327 8492 57 4 9 chr5 158458053 158459939 -41170211 + L1PA5 LINE L1 4250 6149 -5 * 275 96 19 0 chr5 158459948 158460000 -41170150 + (TAAAA)n Simple_repeat Simple_repeat 2 54 0 182 265 118 0 chr5 158460809 158460877 -41169273 + MIR SINE MIR 67 142 -66 345 253 23 0 chr5 158461291 158461378 -41168772 + L1ME3A LINE L1 5899 5987 -183 924 240 25 0 chr5 158462371 158462575 -41167575 + MER20 DNA MER1_type 1 209 -10 186 118 0 0 chr5 158462613 158462647 -41167503 + (TG)n Simple_repeat Simple_repeat 1 34 0 299 354 39 15 chr5 158463046 158463176 -41166974 + MIR SINE MIR 17 149 -59 305 331 101 0 chr5 158463240 158463379 -41166771 - MIR SINE MIR -71 191 39 180 252 244 35 chr5 158463412 158463527 -41166623 + MIR SINE MIR 124 262 0 306 311 25 25 chr5 158464411 158464530 -41165620 - MIR SINE MIR -63 145 25 2460 70 0 25 chr5 158464758 158465073 -41165077 - AluSx SINE Alu -5 307 1 561 229 64 25 chr5 158465391 158465548 -41164602 - Zaphod DNA AcHobo -5 4026 3864 1407 196 69 39 chr5 158465558 158466148 -41164002 + LTR8 LTR ERV1 2 691 0 951 193 60 20 chr5 158466148 158466397 -41163753 - Zaphod DNA AcHobo -176 3855 3597 378 199 82 73 chr5 158466399 158466715 -41163435 - Zaphod DNA AcHobo -3043 988 670 769 195 208 35 chr5 158466717 158467035 -41163115 - Zaphod DNA AcHobo -3226 805 433 2845 163 25 11 chr5 158467053 158467700 -41162450 - MER39 LTR ERV1 -11 696 1 1153 246 133 55 chr5 158467705 158467774 -41162376 - Zaphod DNA AcHobo -3602 429 367 7713 20 3 0 chr5 158467774 158468859 -41161291 - L1PA3 LINE L1 -5 6150 5065 1153 246 133 55 chr5 158468859 158469187 -41160963 - Zaphod DNA AcHobo -3664 367 1 23 0 0 0 chr5 158469300 158469323 -41160827 + AT_rich Low_complexity Low_complexity 1 23 0 504 283 152 26 chr5 158469782 158469973 -41160177 - MIR SINE MIR -47 215 1 569 265 51 20 chr5 158471335 158471531 -41158619 - L2 LINE L2 0 3313 3112 209 194 0 0 chr5 158471671 158471707 -41158443 - L2 LINE L2 -28 3285 3250 590 276 102 16 chr5 158471731 158471958 -41158192 + MIR SINE MIR 8 249 -13 236 316 0 0 chr5 158472182 158472258 -41157892 + (CACCAT)n Simple_repeat Simple_repeat 4 79 0 334 289 55 23 chr5 158472298 158472426 -41157724 - MIR SINE MIR -14 248 117 32348 45 4 2 chr5 158472447 158476526 -41153624 - L1P LINE L1 -879 5267 1180 7719 56 1 7 chr5 158476526 158477502 -41152648 + L1P LINE L1 210 1179 -4967 670 234 108 19 chr5 158477550 158477767 -41152383 - MIR SINE MIR -24 238 4 263 360 36 76 chr5 158477948 158478045 -41152105 + L2 LINE L2 2665 2764 -550 796 184 50 6 chr5 158478045 158478224 -41151926 + MER53 DNA DNA 2 188 -1 263 360 36 76 chr5 158478224 158478429 -41151721 + L2 LINE L2 2764 2955 -359 326 284 118 0 chr5 158478572 158478699 -41151451 + L2 LINE L2 3167 3308 -5 2341 167 47 53 chr5 158479432 158479905 -41150245 + MER66B LTR ERV1 17 486 0 21 36 0 0 chr5 158480604 158480632 -41149518 + AT_rich Low_complexity Low_complexity 1 28 0 33 25 0 0 chr5 158481076 158481116 -41149034 + AT_rich Low_complexity Low_complexity 1 40 0 2054 103 25 7 chr5 158481493 158481774 -41148376 + AluSq SINE Alu 1 286 -27 893 220 49 4 chr5 158482859 158483123 -41147027 - MER33 DNA MER1_type -24 300 25 458 275 183 0 chr5 158483156 158483298 -41146852 + MER5A DNA MER1_type 14 181 -8 180 179 0 0 chr5 158483300 158483339 -41146811 + (TTA)n Simple_repeat Simple_repeat 2 40 0 261 0 0 0 chr5 158484287 158484316 -41145834 + (T)n Simple_repeat Simple_repeat 1 29 0 11811 190 22 27 chr5 158484882 158488594 -41141556 + L1MA7 LINE L1 2538 6230 -61 1940 133 18 0 chr5 158488594 158488879 -41141271 + AluSg SINE Alu 1 290 -20 11811 190 22 27 chr5 158488879 158488941 -41141209 + L1MA7 LINE L1 6230 6291 0 189 348 25 44 chr5 158488964 158489122 -41141028 - L2 LINE L2 -835 2479 2325 1634 152 64 64 chr5 158490836 158491211 -41138939 + THE1C LTR MaLR 1 375 0 246 298 77 10 chr5 158491367 158491471 -41138679 + MER46C DNA MER2_type 73 183 -155 365 339 57 26 chr5 158491629 158491821 -41138329 - MIR SINE MIR -45 217 20 21 0 0 0 chr5 158491850 158491871 -41138279 + AT_rich Low_complexity Low_complexity 1 21 0 2039 128 3 3 chr5 158492405 158492702 -41137448 - AluSx SINE Alu -15 297 1 6599 58 20 29 chr5 158492864 158494444 -41135706 + L1PA7 LINE L1 4359 5829 -325 1001 102 0 182 chr5 158494444 158494680 -41135470 - 7SK RNA RNA 0 193 1 6599 58 20 29 chr5 158494680 158495004 -41135146 + L1PA7 LINE L1 5829 6154 0 398 356 83 25 chr5 158495096 158495422 -41134728 - L1MC/D LINE L1 -2169 5639 5295 2074 113 0 0 chr5 158495483 158495821 -41134329 - AluSc SINE Alu 0 338 1 262 243 110 22 chr5 158496048 158496184 -41133966 - L1ME LINE L1 -632 5534 5387 1112 316 66 60 chr5 158496285 158497255 -41132895 - L1ME LINE L1 -1441 4705 3730 1825 150 38 91 chr5 158497377 158497849 -41132301 + L1MA7 LINE L1 5845 6291 0 255 61 0 0 chr5 158497993 158498026 -41132124 + (TC)n Simple_repeat Simple_repeat 1 33 0 426 297 86 17 chr5 158500083 158500258 -41129892 - MIR SINE MIR -48 214 28 322 369 35 35 chr5 158500321 158500635 -41129515 - L1ME LINE L1 -2454 3692 3379 263 244 33 0 chr5 158500643 158500733 -41129417 + (TA)n Simple_repeat Simple_repeat 1 93 0 1860 118 4 0 chr5 158500893 158501171 -41128979 - AluSq SINE Alu 0 308 30 326 287 115 50 chr5 158501203 158501629 -41128521 - L1ME LINE L1 -3046 3100 2582 491 0 17 0 chr5 158501629 158501688 -41128462 + (TA)n Simple_repeat Simple_repeat 2 61 0 326 287 115 50 chr5 158501688 158501820 -41128330 - L1ME LINE L1 -3564 2582 2460 2749 13 0 0 chr5 158502276 158502578 -41127572 - AluYa5 SINE Alu -9 302 1 214 182 0 0 chr5 158503774 158503818 -41126332 + T-rich Low_complexity Low_complexity 2 45 0 2212 63 3 14 chr5 158505167 158505505 -41124645 + AluY SINE Alu 1 335 0 24 0 0 0 chr5 158506327 158506351 -41123799 + AT_rich Low_complexity Low_complexity 1 24 0 222 321 15 67 chr5 158506788 158506922 -41123228 - MIR SINE MIR -76 186 60 365 239 34 0 chr5 158507008 158507096 -41123054 - MLT1G LTR MaLR -42 548 458 710 244 51 60 chr5 158507325 158507427 -41122723 - MIR SINE MIR 0 262 161 1819 106 97 26 chr5 158507427 158507777 -41122373 + THE1C LTR MaLR 1 375 0 710 244 51 60 chr5 158507777 158507891 -41122259 - MIR SINE MIR -101 161 48 1670 276 89 6 chr5 158507980 158508472 -41121678 + MLT1G LTR MaLR 16 548 -42 339 341 32 0 chr5 158509206 158509332 -41120818 - L2 LINE L2 0 3313 3184 21 0 0 31 chr5 158509511 158509527 -41120623 + AT_rich Low_complexity Low_complexity 1 16 -15 2662 173 13 4 chr5 158509527 158510054 -41120096 - L1MA5 LINE L1 0 6300 5769 21 0 0 31 chr5 158510054 158510069 -41120081 + AT_rich Low_complexity Low_complexity 16 31 0 14709 20 0 0 chr5 158510069 158512564 -41117586 - L1HS LINE L1 0 6155 3661 1250 182 0 0 chr5 158512561 158512781 -41117369 - L1MA5 LINE L1 -509 5791 5572 * 5187 184 13 7 chr5 158512905 158515398 -41114752 - L1PA15 LINE L1 -13 6152 3566 6578 66 19 5 chr5 158515397 158516567 -41113583 - L1PA7 LINE L1 -2 6152 4982 4616 103 14 0 chr5 158516567 158517297 -41112853 - L1P LINE L1 -1091 5055 4316 15377 108 8 1 chr5 158517300 158519690 -41110460 + L1P LINE L1 1944 4348 -1798 2676 229 22 8 chr5 158519661 158520438 -41109712 - L1PA15 LINE L1 -2571 3575 2788 * 10112 192 39 75 chr5 158520511 158521883 -41108267 - L1M2 LINE L1 -743 6465 5044 264 30 0 0 chr5 158521883 158521916 -41108234 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 10112 192 39 75 chr5 158521916 158522799 -41107351 - L1M2 LINE L1 -2164 5044 4130 987 139 0 115 chr5 158522799 158523008 -41107142 - AluSg/x SINE Alu -6 306 122 10112 192 39 75 chr5 158523008 158525619 -41104531 - L1M2 LINE L1 -3078 4130 1740 1836 280 69 25 chr5 158525656 158526384 -41103766 - L1M2 LINE L1 -6435 774 15 18751 180 26 14 chr5 158526706 158530206 -41099944 - L1 LINE L1 -3516 4049 593 186 43 0 0 chr5 158530206 158530229 -41099921 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 7570 25 5 0 chr5 158530232 158531817 -41098333 - L1PA4 LINE L1 -5 6150 4562 18751 180 26 14 chr5 158531817 158532286 -41097864 - L1 LINE L1 -6973 592 16 253 194 16 0 chr5 158532301 158532363 -41097787 - L1M1 LINE L1 -3965 3141 3079 437 199 1 10 chr5 158532365 158532472 -41097678 - L1M1 LINE L1 -4947 2090 1975 39 60 0 0 chr5 158533027 158533094 -41097056 + AT_rich Low_complexity Low_complexity 1 67 0 1526 203 39 56 chr5 158533355 158533769 -41096381 + L1M3e LINE L1 10 416 -6614 417 151 0 14 chr5 158533785 158533858 -41096292 + MER58 DNA MER1_type 2348 2419 -1 272 352 84 0 chr5 158533867 158534009 -41096141 - MER117 DNA MER1_type 0 197 44 1393 254 67 12 chr5 158534095 158534516 -41095634 + LTR16C LTR ERVL 48 491 0 444 139 0 38 chr5 158535831 158535910 -41094240 - MER1B DNA MER1_type -4 329 254 1514 160 11 11 chr5 158535947 158536216 -41093934 - MER1B DNA MER1_type -70 269 1 204 278 123 80 chr5 158536219 158536406 -41093744 + L2 LINE L2 3086 3280 -33 199 217 17 26 chr5 158536523 158536638 -41093512 + (TA)n Simple_repeat Simple_repeat 2 115 0 466 267 48 41 chr5 158537469 158537615 -41092535 - MIR SINE MIR 0 262 116 360 292 50 8 chr5 158537675 158537795 -41092355 - L2 LINE L2 0 3313 3189 237 235 103 0 chr5 158538399 158538467 -41091683 + LTR16A1 LTR ERVL 381 455 -2 750 337 61 20 chr5 158538469 158539080 -41091070 + HERV16 LTR ERVL 1 636 -4360 618 324 23 43 chr5 158539373 158539722 -41090428 + HERV16 LTR ERVL 958 1299 -3697 242 289 13 0 chr5 158539957 158540033 -41090117 + LTR16A1 LTR ERVL 381 457 0 2143 123 3 0 chr5 158540445 158540746 -41089404 - AluSx SINE Alu -10 302 1 491 280 69 23 chr5 158541679 158541854 -41088296 + MIR SINE MIR 72 254 -8 1746 129 19 4 chr5 158543711 158543967 -41086183 - AluSq SINE Alu -53 260 1 447 338 150 9 chr5 158544020 158544233 -41085917 + MIR SINE MIR 2 244 -18 239 324 102 9 chr5 158544444 158544552 -41085598 - MER5A DNA MER1_type -70 119 2 269 118 59 73 chr5 158545296 158545364 -41084786 + MER5A DNA MER1_type 3 69 -120 422 374 23 18 chr5 158545423 158545594 -41084556 + L3 LINE CR1 1406 1577 0 277 360 25 46 chr5 158546028 158546225 -41083925 - MIR SINE MIR -50 212 20 3441 216 82 33 chr5 158546242 158547447 -41082703 - Charlie1a DNA MER1_type 0 1455 192 28726 109 8 25 chr5 158547453 158550776 -41079374 - L1PA7 LINE L1 0 6469 3215 1944 138 0 0 chr5 158550776 158551052 -41079098 - AluSq SINE Alu -5 308 33 28726 109 8 25 chr5 158551052 158553970 -41076180 - L1PA7 LINE L1 -3254 3215 246 704 199 59 52 chr5 158553970 158554257 -41075893 + pTR5 LTR ERV1 743 1031 -1407 3925 73 50 168 chr5 158554440 158555220 -41074930 + LTR12 LTR ERV1 1 688 0 1509 80 0 19 chr5 158555221 158555433 -41074717 - L1P3 LINE L1 -6213 248 41 675 244 35 0 chr5 158555433 158555605 -41074545 - Charlie1a DNA MER1_type -1254 201 24 206 304 0 0 chr5 158556081 158556127 -41074023 + L2 LINE L2 3184 3229 -43 1313 220 45 3 chr5 158556167 158556725 -41073425 - MER82 DNA MER2_type -1 652 1 1892 213 17 23 chr5 158556889 158557359 -41072791 + MLT1C LTR MaLR 1 467 0 1156 186 9 47 chr5 158558351 158558402 -41071748 - L1MB3 LINE L1 -1 6182 6131 2476 51 0 10 chr5 158558402 158558714 -41071436 - AluY SINE Alu -2 309 1 1156 186 9 47 chr5 158558714 158558980 -41071170 - L1MB3 LINE L1 -52 6131 5877 350 302 83 29 chr5 158559003 158559208 -41070942 - MIR SINE MIR -13 249 34 232 321 24 12 chr5 158559359 158559443 -41070707 + L2 LINE L2 3191 3275 -38 1150 242 27 4 chr5 158559450 158559706 -41070444 + Tigger7 DNA MER2_type 3 264 -2223 322 245 21 11 chr5 158559707 158559801 -41070349 + Tigger7 DNA MER2_type 2391 2485 -2 363 343 70 7 chr5 158561500 158561643 -41068507 + MIR SINE MIR 1 152 -110 386 326 0 29 chr5 158561710 158561848 -41068302 - L2 LINE L2 0 3313 3180 701 366 37 13 chr5 158562694 158563181 -41066969 - L2 LINE L2 -146 3167 2667 206 351 0 13 chr5 158563890 158563967 -41066183 + L2 LINE L2 3180 3255 -58 230 362 50 14 chr5 158564119 158564260 -41065890 - L2 LINE L2 0 3313 3168 2216 128 0 28 chr5 158564835 158565155 -41064995 + AluSx SINE Alu 1 311 -1 398 330 169 14 chr5 158565282 158565643 -41064507 + L2 LINE L2 2896 3312 -1 189 0 0 0 chr5 158565703 158565724 -41064426 + (TA)n Simple_repeat Simple_repeat 1 21 0 4874 138 15 2 chr5 158565725 158566537 -41063613 - L1PA15 LINE L1 -10 6155 5334 338 208 0 14 chr5 158566755 158566827 -41063323 + MIR3 SINE MIR 130 200 -8 594 289 91 9 chr5 158567297 158567529 -41062621 + MIR SINE MIR 8 258 -4 376 375 27 31 chr5 158567941 158568200 -41061950 + MIR SINE MIR 5 262 0 384 59 0 0 chr5 158568325 158568376 -41061774 + (CAA)n Simple_repeat Simple_repeat 2 52 0 1879 182 62 20 chr5 158568722 158569123 -41061027 - MSTB LTR MaLR -8 418 1 270 281 106 36 chr5 158569628 158569988 -41060162 - L1MC5 LINE L1 -280 7681 7297 403 381 51 10 chr5 158570054 158570251 -41059899 + L1ME LINE L1 138 342 -5863 2641 83 103 5 chr5 158570362 158570770 -41059380 - LTR7 LTR ERV1 -2 448 1 2214 96 50 13 chr5 158570770 158571146 -41059004 - HERVH LTR ERV1 0 7713 7324 1259 110 53 0 chr5 158571146 158571355 -41058795 - HERVH LTR ERV1 -1894 5819 5600 3584 115 2 0 chr5 158571356 158571887 -41058263 - HERVH LTR ERV1 -2564 5149 4618 * 5353 101 1 2 chr5 158571885 158572699 -41057451 - HERVH LTR ERV1 -3761 3952 3140 * 11599 107 14 27 chr5 158572678 158574982 -41055168 - HERVH LTR ERV1 -4718 2995 793 2804 109 14 5 chr5 158575057 158575499 -41054651 - HERVH LTR ERV1 -7267 446 1 2620 90 98 5 chr5 158575501 158575911 -41054239 - LTR7 LTR ERV1 -2 448 1 1466 206 8 12 chr5 158576128 158576508 -41053642 + L1MA7 LINE L1 5013 5385 -771 222 171 0 0 chr5 158576541 158576582 -41053568 + (TG)n Simple_repeat Simple_repeat 2 42 0 3753 189 43 16 chr5 158576610 158576998 -41053152 + L1MA7 LINE L1 5395 5771 -520 411 83 0 0 chr5 158576998 158577058 -41053092 + (TA)n Simple_repeat Simple_repeat 1 60 0 3753 189 43 16 chr5 158577058 158577532 -41052618 + L1MA7 LINE L1 5771 6280 -11 1801 269 73 101 chr5 158577606 158579316 -41050834 + L1ME LINE L1 662 2323 -4073 594 216 55 0 chr5 158579343 158579524 -41050626 + L1ME LINE L1 2399 2589 -3626 2792 13 0 0 chr5 158579526 158579833 -41050317 + AluYa5 SINE Alu 1 307 -4 481 206 20 0 chr5 158579850 158579952 -41050198 - MLT1D LTR MaLR -397 108 5 190 203 14 14 chr5 158580014 158580083 -41050067 + CT-rich Low_complexity Low_complexity 2 70 0 282 325 26 34 chr5 158580448 158580565 -41049585 - L2 LINE L2 -12 3301 3186 526 232 40 24 chr5 158581805 158581930 -41048220 + L2 LINE L2 3184 3310 -3 280 264 28 0 chr5 158582217 158582289 -41047861 - MLT1L LTR MaLR -128 487 414 619 222 111 6 chr5 158582471 158582633 -41047517 - L2 LINE L2 -1047 2267 2089 364 250 0 0 chr5 158582627 158582711 -41047439 + MIR SINE MIR 68 151 -111 * 39256 46 3 4 chr5 158582852 158588739 -41041411 - L1PA4 LINE L1 0 6155 278 15518 171 53 23 chr5 158588937 158590478 -41039672 + L1MA1 LINE L1 13 1507 -6214 288 0 0 0 chr5 158590478 158590510 -41039640 + (GA)n Simple_repeat Simple_repeat 1 32 0 15518 171 53 23 chr5 158590510 158590661 -41039489 + L1MA1 LINE L1 1507 1652 -6069 300 109 0 0 chr5 158590661 158590707 -41039443 - MADE1 DNA Mariner -34 46 1 15518 171 53 23 chr5 158590707 158591752 -41038398 + L1MA1 LINE L1 1652 2664 -5057 2374 70 0 3 chr5 158591752 158592038 -41038112 + AluY SINE Alu 13 297 -14 15518 171 53 23 chr5 158592038 158592312 -41037838 + L1MA1 LINE L1 2664 2928 -4793 1771 161 102 15 chr5 158592312 158592647 -41037503 + THE1B LTR MaLR 1 364 0 15518 171 53 23 chr5 158592647 158594293 -41035857 + L1MA1 LINE L1 2928 4523 -3198 2029 129 0 35 chr5 158594293 158594603 -41035547 + AluY SINE Alu 1 299 -12 15518 171 53 23 chr5 158594603 158597379 -41032771 + L1MA1 LINE L1 4523 7721 0 1074 322 63 12 chr5 158598971 158599400 -41030750 - L2 LINE L2 -5 3308 2858 3851 226 22 24 chr5 158599616 158600677 -41029473 - L1MD2 LINE L1 0 6359 5301 2215 111 7 0 chr5 158600689 158600987 -41029163 - AluSp SINE Alu -13 300 1 197 81 0 54 chr5 158601010 158601047 -41029103 + (TTTC)n Simple_repeat Simple_repeat 3 37 0 1553 321 71 5 chr5 158601063 158601640 -41028510 - L1MDb LINE L1 -5792 617 3 704 231 0 97 chr5 158601662 158601961 -41028189 - L1MD2 LINE L1 -17 6342 6073 705 183 83 0 chr5 158601978 158602147 -41028003 + L1MD2 LINE L1 5853 6035 -324 * 3651 157 17 9 chr5 158602143 158602837 -41027313 - L1MC1 LINE L1 -205 6128 5429 * 5101 116 12 46 chr5 158602829 158603810 -41026340 - L1PA8A LINE L1 0 6131 5185 2549 206 19 9 chr5 158603831 158604408 -41025742 - L1MB2 LINE L1 -3 6168 5586 845 211 50 105 chr5 158604408 158604792 -41025358 + MLT1A1 LTR MaLR 1 365 0 1056 204 0 0 chr5 158604792 158604993 -41025157 - L1MB2 LINE L1 -581 5590 5390 1713 223 22 6 chr5 158604993 158605352 -41024798 + MLT1A1 LTR MaLR 1 365 0 838 257 42 81 chr5 158605365 158605821 -41024329 - L1MB2 LINE L1 -846 5300 4863 208 313 161 0 chr5 158607144 158607256 -41022894 + L2 LINE L2 3143 3272 0 2059 122 9 44 chr5 158607347 158607667 -41022483 - AluSx SINE Alu -1 311 3 487 227 124 16 chr5 158607803 158607988 -41022162 + LTR52 LTR ERVL 211 415 -6 197 83 28 0 chr5 158609013 158609049 -41021101 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 208 171 0 24 chr5 158609503 158609544 -41020606 + GA-rich Low_complexity Low_complexity 3 42 0 362 296 0 37 chr5 158609918 158610026 -41020124 - L2 LINE L2 0 3272 3169 1873 144 90 0 chr5 158610788 158611121 -41019029 - THE1B LTR MaLR -1 363 1 9778 123 33 34 chr5 158611121 158612703 -41017447 - THE1B-int LTR MaLR 0 1580 1 2158 131 31 14 chr5 158612703 158613061 -41017089 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr5 158613539 158613560 -41016590 + AT_rich Low_complexity Low_complexity 1 21 0 401 229 83 0 chr5 158613976 158614072 -41016078 - MIR SINE MIR 0 262 159 354 308 0 15 chr5 158614072 158614202 -41015948 - LTR33 LTR ERVL 0 521 394 266 359 20 32 chr5 158614663 158614914 -41015236 - HERVL LTR ERVL -4277 1377 1130 992 311 69 14 chr5 158615802 158616294 -41013856 - LTR33 LTR ERVL -2 519 1 2186 91 7 20 chr5 158616301 158616597 -41013553 + AluSc SINE Alu 6 297 -12 348 321 102 7 chr5 158616605 158616742 -41013408 - MIR SINE MIR -102 160 11 348 320 31 23 chr5 158616865 158616993 -41013157 - MIR SINE MIR -56 152 24 297 128 0 0 chr5 158617029 158617076 -41013074 + (TTCC)n Simple_repeat Simple_repeat 4 50 0 267 261 15 0 chr5 158618032 158618097 -41012053 - L2 LINE L2 -7 3306 3241 301 316 53 13 chr5 158618461 158618613 -41011537 + MIR SINE MIR 103 260 -2 249 187 0 0 chr5 158619221 158619267 -41010883 - MIR SINE MIR -105 157 113 473 325 141 30 chr5 158619547 158619981 -41010169 + L2 LINE L2 2832 3313 0 306 73 0 0 chr5 158620528 158620569 -41009581 + (CA)n Simple_repeat Simple_repeat 1 41 0 273 347 40 60 chr5 158620771 158620970 -41009180 - MIR SINE MIR 0 262 68 757 313 42 4 chr5 158621071 158621311 -41008839 - MIR SINE MIR -10 252 4 347 360 13 7 chr5 158621644 158621797 -41008353 + L2 LINE L2 3159 3312 -1 274 246 0 0 chr5 158621957 158622018 -41008132 + MIR SINE MIR 86 146 -116 4218 75 8 10 chr5 158622025 158622621 -41007529 + L1MA1 LINE L1 5705 6299 -3 180 77 0 0 chr5 158623625 158623651 -41006499 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 2267 109 0 0 chr5 158623806 158624099 -41006051 - AluSg SINE Alu -17 293 1 245 320 109 0 chr5 158624151 158624279 -41005871 - L1ME LINE L1 -502 5619 5478 507 336 81 8 chr5 158624402 158624637 -41005513 + MIR SINE MIR 11 262 0 494 319 79 21 chr5 158624668 158624909 -41005241 + L3 LINE CR1 1084 1338 -239 401 308 148 20 chr5 158624940 158625423 -41004727 + MLT1K LTR MaLR 2 573 -15 226 374 52 26 chr5 158625427 158625582 -41004568 + L3 LINE CR1 1412 1570 -7 470 288 101 10 chr5 158625707 158625905 -41004245 + LTR33 LTR ERVL 1 216 -305 333 318 39 8 chr5 158626983 158627112 -41003038 + MIR SINE MIR 12 144 -118 273 314 53 102 chr5 158627356 158627659 -41002491 - L2 LINE L2 -376 2938 2651 457 263 53 0 chr5 158628437 158628551 -41001599 - L2 LINE L2 0 3313 3194 240 221 284 24 chr5 158628695 158628822 -41001328 + MER5A DNA MER1_type 8 167 -22 298 254 154 0 chr5 158628999 158629109 -41001041 - MIR SINE MIR -26 236 110 648 291 0 48 chr5 158629425 158629635 -41000515 - MIR SINE MIR -6 256 57 2308 102 3 0 chr5 158629752 158630057 -41000093 - AluSp SINE Alu -7 306 1 1878 160 0 22 chr5 158630079 158630398 -40999752 + AluJb SINE Alu 1 312 0 25 0 0 0 chr5 158630461 158630486 -40999664 + AT_rich Low_complexity Low_complexity 1 25 0 1364 134 202 24 chr5 158630504 158630757 -40999393 - AluSg1 SINE Alu -11 298 1 373 258 35 25 chr5 158630792 158630911 -40999239 - MIR3 SINE MIR -45 163 43 238 224 65 35 chr5 158631054 158631163 -40998987 - MIR SINE MIR -81 181 69 1909 158 0 31 chr5 158631516 158631838 -40998312 + AluJo SINE Alu 1 312 0 2370 92 3 10 chr5 158632048 158632362 -40997788 + AluSp SINE Alu 1 312 -1 675 45 0 0 chr5 158632755 158632844 -40997306 + L1MA1 LINE L1 6214 6302 0 1850 166 0 16 chr5 158632848 158633161 -40996989 + AluJb SINE Alu 1 308 -4 21 0 0 0 chr5 158633161 158633182 -40996968 + AT_rich Low_complexity Low_complexity 1 21 0 602 133 177 9 chr5 158633382 158633495 -40996655 + AluJo SINE Alu 1 132 -170 358 231 39 0 chr5 158633496 158633574 -40996576 + AluJo SINE Alu 132 212 -90 1074 139 24 0 chr5 158633575 158633740 -40996410 + AluJ SINE Alu 114 282 -30 26 0 0 0 chr5 158633771 158633797 -40996353 + AT_rich Low_complexity Low_complexity 1 26 0 513 161 15 85 chr5 158633881 158634011 -40996139 + MER103 DNA DNA 11 131 -35 682 254 60 32 chr5 158634828 158635045 -40995105 + MIR SINE MIR 15 237 -25 186 339 45 41 chr5 158635565 158635786 -40994364 - L2 LINE L2 -604 2710 2489 202 263 35 0 chr5 158636564 158636621 -40993529 - MIR3 SINE MIR -39 169 111 1226 164 28 5 chr5 158637364 158637578 -40992572 - MER20 DNA MER1_type 0 219 1 221 282 120 51 chr5 158637889 158638006 -40992144 - MIR SINE MIR -102 160 36 11212 54 14 5 chr5 158640736 158642311 -40987839 - L1P LINE L1 -2225 3921 2333 9111 39 6 0 chr5 158642311 158644205 -40985945 + L1PA4 LINE L1 4250 6150 -5 186 43 0 0 chr5 158644208 158644231 -40985919 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 16421 176 27 15 chr5 158644231 158647731 -40982419 + L1M1 LINE L1 498 4049 -3516 1845 279 69 25 chr5 158648053 158648781 -40981369 + L1M2b LINE L1 15 774 -6435 4776 208 39 105 chr5 158648818 158651425 -40978725 + L1M2b LINE L1 1740 4308 -2900 987 139 0 115 chr5 158651425 158651634 -40978516 + AluSg/x SINE Alu 120 304 -6 4776 208 39 105 chr5 158651634 158652092 -40978058 + L1M2b LINE L1 4308 4794 -2414 551 253 138 6 chr5 158652224 158652398 -40977752 + MIR SINE MIR 53 249 -13 236 316 0 0 chr5 158652622 158652698 -40977452 + (CACCAT)n Simple_repeat Simple_repeat 4 79 0 332 289 55 23 chr5 158652738 158652866 -40977284 - MIR SINE MIR -14 248 117 30946 45 4 2 chr5 158652887 158656967 -40973183 - L1P LINE L1 -879 5267 1180 7237 58 4 7 chr5 158656967 158657940 -40972210 + L1P LINE L1 210 1179 -4967 679 239 108 19 chr5 158657988 158658205 -40971945 - MIR SINE MIR -24 238 4 272 356 36 76 chr5 158658387 158658484 -40971666 + L2 LINE L2 2665 2764 -550 776 184 50 6 chr5 158658484 158658663 -40971487 + MER53 DNA DNA 2 188 -1 272 356 36 76 chr5 158658663 158658868 -40971282 + L2 LINE L2 2764 2955 -359 326 284 118 0 chr5 158659011 158659138 -40971012 + L2 LINE L2 3167 3308 -5 2108 166 46 61 chr5 158659871 158660348 -40969802 + MER66B LTR ERV1 17 486 0 21 36 0 0 chr5 158661047 158661075 -40969075 + AT_rich Low_complexity Low_complexity 1 28 0 33 25 0 0 chr5 158661519 158661559 -40968591 + AT_rich Low_complexity Low_complexity 1 40 0 2081 100 25 7 chr5 158661936 158662217 -40967933 + AluSq SINE Alu 1 286 -27 835 216 49 4 chr5 158663302 158663566 -40966584 - MER33 DNA MER1_type -24 300 25 454 275 183 0 chr5 158663599 158663741 -40966409 + MER5A DNA MER1_type 14 181 -8 180 179 0 0 chr5 158663743 158663782 -40966368 + (TTA)n Simple_repeat Simple_repeat 2 40 0 333 0 0 0 chr5 158664730 158664767 -40965383 + (T)n Simple_repeat Simple_repeat 1 37 0 3241 206 24 22 chr5 158665333 158666280 -40963870 + L1 LINE L1 2538 3486 -2660 1464 195 14 4 chr5 158666283 158668181 -40961969 - L1P4 LINE L1 -604 5561 3566 6575 64 19 5 chr5 158668180 158669350 -40960800 - L1PA7 LINE L1 -2 6152 4982 4867 103 14 0 chr5 158669350 158670080 -40960070 - L1P LINE L1 -1091 5055 4316 16089 109 8 2 chr5 158670083 158672473 -40957677 + L1P LINE L1 1944 4348 -1798 2932 227 23 10 chr5 158672444 158673237 -40956913 - L1P4 LINE L1 -2571 3575 2773 * 6630 180 44 28 chr5 158673294 158674666 -40955484 - L1M2 LINE L1 -743 5403 4149 264 30 0 0 chr5 158674666 158674699 -40955451 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 6630 180 44 28 chr5 158674699 158675096 -40955054 - L1M2 LINE L1 -1997 4149 3760 201 306 0 14 chr5 158725098 158725170 -40904980 + MIR SINE MIR 192 262 0 481 319 79 21 chr5 158725201 158725442 -40904708 + L3 LINE CR1 1084 1338 -239 506 294 141 31 chr5 158725473 158725956 -40904194 + MLT1K LTR MaLR 2 573 -15 222 381 52 26 chr5 158725960 158726115 -40904035 + L3 LINE CR1 1412 1570 -7 631 318 91 26 chr5 158726240 158726592 -40903558 + LTR33 LTR ERVL 1 375 -146 306 307 216 18 chr5 158726970 158727188 -40902962 + MIR SINE MIR 2 262 0 284 233 27 0 chr5 158727254 158727327 -40902823 - Charlie8 DNA MER1_type -1 2416 2342 336 303 47 81 chr5 158727462 158727673 -40902477 - Charlie8 DNA MER1_type -2181 236 33 268 243 57 57 chr5 158728536 158728606 -40901544 - L2 LINE L2 -1 3312 3243 627 280 63 14 chr5 158728812 158729019 -40901131 + MIR SINE MIR 30 246 -16 27 49 0 0 chr5 158729029 158729070 -40901080 + AT_rich Low_complexity Low_complexity 1 41 0 230 195 0 0 chr5 158729420 158729461 -40900689 - MLT1K LTR MaLR -16 572 532 210 345 95 0 chr5 158731727 158731843 -40898307 + L2 LINE L2 3187 3313 0 189 107 0 0 chr5 158732129 158732157 -40897993 + (T)n Simple_repeat Simple_repeat 1 28 0 5390 29 0 0 chr5 158732160 158732786 -40897364 - L1PA3 LINE L1 -4 6151 5526 293 279 74 8 chr5 158732877 158732999 -40897151 + MER103 DNA DNA 37 166 0 190 260 0 20 chr5 158733224 158733274 -40896876 - MIR SINE MIR -1 261 213 219 208 0 21 chr5 158733567 158733615 -40896535 + (TA)n Simple_repeat Simple_repeat 1 47 0 2137 97 3 26 chr5 158733633 158733943 -40896207 - AluSx SINE Alu -9 303 1 612 319 124 13 chr5 158733953 158734267 -40895883 - L1MC4 LINE L1 -1040 7002 6654 2086 115 0 35 chr5 158734404 158734716 -40895434 + AluSx SINE Alu 1 301 -11 1077 241 157 23 chr5 158734958 158735443 -40894707 - L1MC4a LINE L1 -1747 6061 5512 542 254 55 30 chr5 158735445 158735610 -40894540 - MLT1H LTR MaLR 0 549 381 380 231 120 9 chr5 158735616 158735724 -40894426 + MIR SINE MIR 121 240 -22 4897 177 42 13 chr5 158735730 158736907 -40893243 + L1MB5 LINE L1 4979 6173 -1 488 255 35 14 chr5 158736922 158737067 -40893083 + L1MC5 LINE L1 7782 7929 -32 433 253 47 41 chr5 158737558 158737728 -40892422 - MLT1K LTR MaLR -22 566 396 333 255 201 13 chr5 158738355 158738504 -40891646 - MIR SINE MIR 0 262 86 236 338 0 0 chr5 158738635 158738715 -40891435 - MIR SINE MIR -17 245 166 5761 137 32 23 chr5 158738808 158738937 -40891213 + L1MA5A LINE L1 5185 5311 -986 2204 92 3 0 chr5 158738937 158739240 -40890910 - AluY SINE Alu -7 304 1 5761 137 32 23 chr5 158739240 158740205 -40889945 + L1MA5A LINE L1 5311 6293 -4 1175 294 96 26 chr5 158740768 158741480 -40888670 - L2 LINE L2 0 3313 2553 231 237 17 0 chr5 158741539 158741598 -40888552 - L2 LINE L2 -900 2414 2355 319 160 0 0 chr5 158741634 158741684 -40888466 - L2 LINE L2 -1 3312 3263 301 334 5 5 chr5 158741714 158741842 -40888308 - MIR SINE MIR -70 138 11 3174 183 54 19 chr5 158743215 158743914 -40886236 - LTR8A LTR ERV1 0 727 4 1764 190 40 92 chr5 158744207 158744374 -40885776 - MLT1D LTR MaLR -2 503 329 2503 116 3 24 chr5 158744374 158744755 -40885395 - THE1C LTR MaLR -2 373 1 1764 190 40 92 chr5 158744755 158745118 -40885032 - MLT1D LTR MaLR -176 329 1 306 279 100 36 chr5 158745204 158745344 -40884806 - MER117 DNA MER1_type -42 155 7 1384 266 74 35 chr5 158745451 158745534 -40884616 - L1M4 LINE L1 -1698 4448 4370 7263 39 0 0 chr5 158745534 158746451 -40883699 - L1PA5 LINE L1 -5 6149 5227 1384 266 74 35 chr5 158746451 158746742 -40883408 - L1M4 LINE L1 -1776 4370 4092 1894 102 0 0 chr5 158746742 158747015 -40883135 - AluY SINE Alu 0 312 40 1384 266 74 35 chr5 158747015 158747274 -40882876 - L1M4 LINE L1 -2054 4092 3788 2129 111 47 41 chr5 158747334 158747696 -40882454 - THE1B LTR MaLR 0 364 1 495 288 83 45 chr5 158747704 158748210 -40881940 - L1ME LINE L1 -4810 1270 754 5211 152 13 28 chr5 158748330 158749247 -40880903 + MER4D LTR ERV1 1 903 0 195 308 31 0 chr5 158749652 158749717 -40880433 + L2 LINE L2 2992 3058 -214 376 337 38 11 chr5 158750190 158750374 -40879776 - L2 LINE L2 -5 3308 3120 28 29 0 0 chr5 158750632 158750667 -40879483 + AT_rich Low_complexity Low_complexity 1 35 0 230 274 97 32 chr5 158750860 158750984 -40879166 + MIR SINE MIR 57 188 -74 2284 94 0 7 chr5 158751031 158751330 -40878820 - AluSg SINE Alu -13 297 1 312 213 67 0 chr5 158751335 158751410 -40878740 + L1MDa LINE L1 50 129 -6411 2849 218 40 95 chr5 158751499 158753310 -40876840 - L1MCb LINE L1 -4848 1716 1 3603 214 21 8 chr5 158753803 158755212 -40874938 + L1MB5 LINE L1 4472 5899 -275 989 211 151 36 chr5 158756370 158756674 -40873476 + MSTD LTR MaLR 19 357 -39 686 176 62 143 chr5 158756675 158756947 -40873203 + AluJo SINE Alu 11 260 -52 223 129 81 8 chr5 158757016 158757140 -40873010 + (TA)n Simple_repeat Simple_repeat 2 134 0 322 179 0 0 chr5 158757197 158757253 -40872897 + MSTD LTR MaLR 341 396 0 340 317 48 70 chr5 158757335 158757565 -40872585 + MLT1K LTR MaLR 3 227 -361 421 221 144 67 chr5 158757637 158757832 -40872318 + MLT1K LTR MaLR 377 586 -2 502 311 122 22 chr5 158758605 158758827 -40871323 - MIR SINE MIR -16 246 3 812 279 117 33 chr5 158758955 158759442 -40870708 + L2 LINE L2 1746 2273 -1041 558 369 39 25 chr5 158759443 158760079 -40870071 + L2 LINE L2 2616 3261 -52 41 48 0 0 chr5 158760085 158760147 -40870003 + AT_rich Low_complexity Low_complexity 1 62 0 1297 249 142 5 chr5 158760918 158761292 -40868858 + MLT1D LTR MaLR 3 427 -78 361 339 30 112 chr5 158761817 158762218 -40867932 - L2 LINE L2 -2 3270 2903 1792 106 4 8 chr5 158762236 158762492 -40867658 - AluSc SINE Alu -11 298 44 1978 189 50 23 chr5 158762700 158763235 -40866915 + MLT2A2 LTR ERVL 1 554 0 228 363 18 26 chr5 158763237 158763350 -40866800 + MER5A DNA MER1_type 77 188 -1 26 0 0 0 chr5 158763660 158763686 -40866464 + AT_rich Low_complexity Low_complexity 1 26 0 417 240 78 68 chr5 158764395 158764691 -40865459 + L1MCc LINE L1 1225 1523 -4900 1065 304 95 42 chr5 158764748 158765905 -40864245 + L1MCc LINE L1 1783 3000 -4122 647 152 76 0 chr5 158765933 158766065 -40864085 + L1MA8 LINE L1 6070 6211 -80 1270 269 120 22 chr5 158766111 158766887 -40863263 + L1MCc LINE L1 2971 3822 -3119 258 278 46 0 chr5 158766903 158767011 -40863139 + L1MCc LINE L1 4135 4247 -2694 2816 246 77 69 chr5 158767089 158768166 -40861984 + L1MCc LINE L1 4528 5595 -1362 198 0 0 0 chr5 158768166 158768188 -40861962 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 2816 246 77 69 chr5 158768188 158768512 -40861638 + L1MCc LINE L1 5595 5915 -1042 3673 93 192 2 chr5 158768512 158769090 -40861060 + LTR12 LTR ERV1 1 688 0 2816 246 77 69 chr5 158769090 158769159 -40860991 + L1MCc LINE L1 5915 5982 -975 2070 61 7 4 chr5 158769159 158769437 -40860713 + L1PA4 LINE L1 5876 6154 -1 2816 246 77 69 chr5 158769437 158769662 -40860488 + L1MCc LINE L1 5982 6233 -724 546 304 64 69 chr5 158769777 158770168 -40859982 + L2 LINE L2 2925 3313 0 216 0 0 0 chr5 158770821 158770845 -40859305 + (TG)n Simple_repeat Simple_repeat 2 25 0 1907 167 44 50 chr5 158771774 158772210 -40857940 + Tigger2a DNA MER2_type 1 433 -1 733 55 0 9 chr5 158772728 158772838 -40857312 + L1PA2 LINE L1 942 1050 -5096 33957 24 0 0 chr5 158772838 158777643 -40852507 + L1PA2 LINE L1 1351 6155 0 188 322 0 22 chr5 158778486 158778576 -40851574 - MIR SINE MIR -128 134 47 239 308 26 0 chr5 158779291 158779369 -40850781 + MIR SINE MIR 106 185 -77 639 309 80 23 chr5 158780034 158780296 -40849854 - L2 LINE L2 0 3313 3037 24 32 0 0 chr5 158781578 158781609 -40848541 + AT_rich Low_complexity Low_complexity 1 31 0 186 289 0 84 chr5 158782063 158782146 -40848004 + L2 LINE L2 3219 3294 -19 231 341 77 24 chr5 158782152 158782360 -40847790 + L2 LINE L2 2616 2834 -480 307 276 17 35 chr5 158782446 158782562 -40847588 + MIR SINE MIR 111 224 -38 1066 225 43 38 chr5 158783783 158784178 -40845972 - L1MDa LINE L1 -4881 1659 1263 40 31 0 15 chr5 158784180 158784207 -40845943 + AT_rich Low_complexity Low_complexity 1 27 -37 2953 112 21 64 chr5 158784207 158784736 -40845414 + L1PA10 LINE L1 5657 6162 -6 40 31 0 15 chr5 158784736 158784773 -40845377 + AT_rich Low_complexity Low_complexity 27 64 0 13659 193 64 24 chr5 158784879 158791438 -40838712 - L1PB2 LINE L1 0 6867 1078 231 114 0 0 chr5 158791438 158791473 -40838677 + (TTG)n Simple_repeat Simple_repeat 2 36 0 13659 193 64 24 chr5 158791473 158792471 -40837679 - L1PB2 LINE L1 -5789 1078 121 5159 191 9 8 chr5 158792454 158793884 -40836266 - L1PA16 LINE L1 -8 6158 4730 * 1994 191 80 0 chr5 158793895 158794282 -40835868 + MSTB LTR MaLR 9 426 0 8584 234 37 22 chr5 158794282 158796973 -40833177 - L1PA15-16 LINE L1 -1415 5434 2700 4238 207 9 6 chr5 158796970 158797895 -40832255 - L1PA15-16 LINE L1 -5610 1239 423 * 6285 90 10 13 chr5 158797896 158798582 -40831568 + L1PA8 LINE L1 4681 5368 -804 2258 113 0 0 chr5 158798582 158798875 -40831275 + AluSg SINE Alu 1 293 -17 6285 90 10 13 chr5 158798875 158798905 -40831245 + L1PA8 LINE L1 5368 5397 -775 207 0 0 0 chr5 158798905 158798928 -40831222 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6285 90 10 13 chr5 158798928 158799692 -40830458 + L1PA8 LINE L1 5397 6159 -13 799 89 0 0 chr5 158799883 158799995 -40830155 - L1PA5 LINE L1 -8 6146 6035 255 31 0 0 chr5 158800614 158800646 -40829504 + (TCCC)n Simple_repeat Simple_repeat 2 33 0 782 93 0 0 chr5 158800655 158800762 -40829388 + L1PA8A LINE L1 5643 5749 -382 500 192 0 8 chr5 158800762 158800882 -40829268 + CT-rich Low_complexity Low_complexity 2 120 0 274 311 58 10 chr5 158801354 158801457 -40828693 + L2 LINE L2 3205 3312 -1 308 255 32 11 chr5 158802130 158802224 -40827926 - MLT1K LTR MaLR -1 587 492 748 228 82 0 chr5 158802310 158802481 -40827669 - MER58C DNA MER1_type -30 185 1 1257 210 28 0 chr5 158802635 158802961 -40827189 + L1PA15-16 LINE L1 1 387 -6462 2863 16 0 0 chr5 158802963 158803281 -40826869 - AluYb8 SINE Alu 0 318 1 6386 86 0 12 chr5 158803351 158804429 -40825721 - L1PA8 LINE L1 -9 6163 5084 3127 131 39 55 chr5 158804429 158805063 -40825087 - L1PA8 LINE L1 -2356 3790 3167 6419 64 31 3 chr5 158805073 158806146 -40824004 - L1PA7 LINE L1 -8 6146 5103 665 221 7 0 chr5 158806146 158806282 -40823868 - L1P3 LINE L1 -5737 138 2 455 239 67 67 chr5 158806281 158806686 -40823464 - L1MEd LINE L1 -4807 1503 1058 * 303 363 0 0 chr5 158807253 158807355 -40822795 + Charlie8 DNA MER1_type 164 265 -2152 414 0 0 0 chr5 158807903 158807949 -40822201 + (TG)n Simple_repeat Simple_repeat 1 46 0 1471 266 57 29 chr5 158808700 158809189 -40820961 + MLT1D LTR MaLR 1 503 -2 320 349 8 8 chr5 158809553 158809679 -40820471 - MER5A DNA MER1_type -63 126 1 7429 40 2 0 chr5 158810074 158811179 -40818971 + L1PA5 LINE L1 5047 6153 -1 237 378 159 0 chr5 158812474 158812625 -40817525 + L2 LINE L2 2851 3025 -288 352 339 73 12 chr5 158813544 158813709 -40816441 + MIR3 SINE MIR 33 207 -1 279 376 41 48 chr5 158814991 158815262 -40814888 - L2 LINE L2 -87 3185 2917 669 273 61 15 chr5 158815703 158815901 -40814249 + MIR SINE MIR 56 262 0 24 0 0 0 chr5 158815907 158815931 -40814219 + AT_rich Low_complexity Low_complexity 1 24 0 386 296 61 34 chr5 158816338 158816717 -40813433 - L1ME4a LINE L1 -8 6113 5725 3967 168 15 64 chr5 158816737 158817536 -40812614 + L1MCa LINE L1 24 783 -5643 1598 236 82 11 chr5 158817533 158818142 -40812008 - L1 LINE L1 -2848 3122 2471 * 707 279 85 4 chr5 158818161 158818419 -40811731 - L1 LINE L1 -5610 281 3 388 289 78 56 chr5 158818796 158818976 -40811174 - MIR3 SINE MIR -6 202 19 210 147 0 0 chr5 158819659 158819693 -40810457 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 30 0 0 0 chr5 158819766 158819796 -40810354 + AT_rich Low_complexity Low_complexity 1 30 0 560 291 78 35 chr5 158819802 158820032 -40810118 - MIR SINE MIR -21 241 2 180 318 16 16 chr5 158820282 158820345 -40809805 - MIR3 SINE MIR -29 179 117 32 67 0 0 chr5 158820560 158820620 -40809530 + AT_rich Low_complexity Low_complexity 1 60 0 30 45 0 0 chr5 158820814 158820858 -40809292 + AT_rich Low_complexity Low_complexity 1 44 0 337 292 5 104 chr5 158821350 158821542 -40808608 + MIR SINE MIR 79 251 -11 918 319 73 28 chr5 158821738 158822202 -40807948 - L2 LINE L2 0 3313 2829 201 39 0 0 chr5 158822388 158822414 -40807736 + (TG)n Simple_repeat Simple_repeat 2 27 0 34 0 0 0 chr5 158822555 158822589 -40807561 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr5 158822965 158822987 -40807163 + AT_rich Low_complexity Low_complexity 1 22 0 450 351 29 23 chr5 158822987 158823158 -40806992 + MIR3 SINE MIR 16 187 -21 469 388 100 14 chr5 158823226 158823817 -40806333 + L2 LINE L2 2211 2852 -462 414 0 0 0 chr5 158823819 158823865 -40806285 + (TTA)n Simple_repeat Simple_repeat 2 47 0 197 281 0 47 chr5 158823989 158824053 -40806097 + L2 LINE L2 2714 2774 -540 236 229 16 0 chr5 158824608 158824669 -40805481 + MER94 DNA DNA 11 72 -62 563 308 103 41 chr5 158824853 158825039 -40805111 - L2 LINE L2 -5 3308 3135 903 206 67 0 chr5 158825039 158825233 -40804917 + MER3 DNA MER1_type 3 209 0 563 308 103 41 chr5 158825233 158825481 -40804669 - L2 LINE L2 -178 3135 2847 299 342 147 34 chr5 158825475 158825605 -40804545 + L2 LINE L2 2896 3010 -303 * 2584 48 0 0 chr5 158825605 158825915 -40804235 - AluY SINE Alu -1 310 1 299 342 147 34 chr5 158825915 158826138 -40804012 + L2 LINE L2 3010 3289 -24 427 274 38 9 chr5 158826421 158826527 -40803623 - MER81 DNA DNA -5 109 1 193 286 0 0 chr5 158826527 158826576 -40803574 + L2 LINE L2 3251 3299 -14 878 296 26 55 chr5 158826873 158827497 -40802653 + L1MEd LINE L1 544 1149 -4970 1524 174 0 82 chr5 158828196 158828500 -40801650 - AluJo SINE Alu -25 287 9 534 310 7 0 chr5 158828891 158829046 -40801104 + MIR SINE MIR 84 239 -23 180 250 0 0 chr5 158829256 158829292 -40800858 - L2 LINE L2 -2 3311 3276 240 302 16 0 chr5 158829457 158829520 -40800630 - L2 LINE L2 -261 3052 2989 2447 58 0 0 chr5 158829685 158829980 -40800170 - AluY SINE Alu -16 295 1 286 329 103 7 chr5 158830088 158830234 -40799916 - MER117 DNA MER1_type -34 163 4 971 173 0 0 chr5 158830565 158830721 -40799429 + FRAM SINE Alu 1 156 -20 242 399 76 0 chr5 158831936 158832094 -40798056 + MIR3 SINE MIR 22 191 -17 409 351 50 10 chr5 158832167 158832369 -40797781 - MIR SINE MIR -50 212 3 399 294 28 56 chr5 158833034 158833248 -40796902 - MLT1K LTR MaLR 0 588 381 242 56 28 0 chr5 158835256 158835292 -40794858 + (TAGA)n Simple_repeat Simple_repeat 1 37 0 240 35 0 0 chr5 158835305 158835334 -40794816 + (TG)n Simple_repeat Simple_repeat 1 29 0 197 269 13 64 chr5 158835377 158835455 -40794695 + MIR SINE MIR 81 154 -108 292 355 134 12 chr5 158835857 158836029 -40794121 - MIR SINE MIR -11 251 59 219 275 69 92 chr5 158836487 158836618 -40793532 + MIR SINE MIR 123 250 -12 390 357 85 8 chr5 158837594 158837963 -40792187 - LTR16B LTR ERVL -9 441 23 319 284 29 10 chr5 158838896 158838998 -40791152 + MIR3 SINE MIR 83 186 -22 310 336 152 9 chr5 158839221 158839432 -40790718 - MIR SINE MIR -21 241 1 205 362 90 37 chr5 158840070 158840258 -40789892 - L2 LINE L2 -338 2976 2779 503 305 196 23 chr5 158840273 158840416 -40789734 - L2 LINE L2 -10 3303 3186 351 0 0 0 chr5 158840416 158840455 -40789695 + (CA)n Simple_repeat Simple_repeat 2 40 0 503 305 196 23 chr5 158840455 158840902 -40789248 - L2 LINE L2 -127 3186 2626 893 186 208 50 chr5 158840903 158841182 -40788968 - MER33 DNA MER1_type -1 323 1 243 286 31 31 chr5 158841225 158841323 -40788827 - L2 LINE L2 -742 2572 2475 191 254 146 55 chr5 158842138 158842248 -40787902 + MIR SINE MIR 19 138 -70 576 203 72 43 chr5 158842747 158842954 -40787196 + MER106B DNA MER1_type 20 1055 -4 349 289 122 37 chr5 158843218 158843488 -40786662 - L2 LINE L2 0 3313 3021 210 329 71 0 chr5 158843689 158843774 -40786376 - L2 LINE L2 0 3313 3223 2645 294 68 19 chr5 158843788 158844719 -40785431 - L2 LINE L2 -951 2363 1388 308 314 12 0 chr5 158844740 158844826 -40785324 + MIR SINE MIR 68 154 -108 333 89 0 127 chr5 158845761 158845881 -40784269 + L1PA10 LINE L1 6099 6208 0 285 338 0 0 chr5 158845976 158846044 -40784106 + L2 LINE L2 3246 3313 0 339 25 0 0 chr5 158847222 158847262 -40782888 + (CA)n Simple_repeat Simple_repeat 2 41 0 201 276 92 46 chr5 158847289 158847376 -40782774 - MER5B DNA MER1_type -74 104 14 23 0 0 0 chr5 158847630 158847653 -40782497 + AT_rich Low_complexity Low_complexity 1 23 0 580 266 18 12 chr5 158847746 158847915 -40782235 + MER117 DNA MER1_type 1 170 -27 1681 159 37 0 chr5 158849972 158850268 -40779882 + MER2 DNA MER2_type 16 322 -23 22 94 0 0 chr5 158850797 158850861 -40779289 + AT_rich Low_complexity Low_complexity 1 64 0 1108 116 12 0 chr5 158850898 158851062 -40779088 - L1PB1 LINE L1 0 6867 6702 9964 195 19 28 chr5 158851072 158853271 -40776879 - L1PB1 LINE L1 -217 6650 4491 2167 99 0 3 chr5 158853271 158853563 -40776587 - AluSg SINE Alu -19 291 1 9964 195 19 28 chr5 158853563 158854556 -40775594 - L1PB1 LINE L1 -2376 4491 3490 1497 169 29 0 chr5 158854548 158854821 -40775329 - L1PB1 LINE L1 -6582 281 1 * 1569 191 29 0 chr5 158856809 158857086 -40773064 + AluJo SINE Alu 1 285 -27 669 321 28 38 chr5 158857096 158857365 -40772785 - MIR SINE MIR 0 262 3 268 349 130 0 chr5 158858456 158858602 -40771548 + MIR SINE MIR 92 256 -6 591 299 6 0 chr5 158858649 158858806 -40771344 + MER58A DNA MER1_type 1 158 0 21 0 0 0 chr5 158859538 158859559 -40770591 + AT_rich Low_complexity Low_complexity 1 21 0 466 279 120 0 chr5 158859738 158859894 -40770256 - MIR SINE MIR -55 207 35 232 276 155 26 chr5 158859892 158860008 -40770142 + L2 LINE L2 3182 3312 -1 * 311 264 136 9 chr5 158860239 158860349 -40769801 - MIR SINE MIR -55 207 84 207 233 9 17 chr5 158860530 158860646 -40769504 + (TA)n Simple_repeat Simple_repeat 2 116 0 1100 279 48 48 chr5 158860677 158861140 -40769010 - L1ME3A LINE L1 -86 6084 5622 27 0 0 0 chr5 158861163 158861190 -40768960 + AT_rich Low_complexity Low_complexity 1 27 0 21 71 0 0 chr5 158862071 158862113 -40768037 + AT_rich Low_complexity Low_complexity 1 42 0 616 202 8 8 chr5 158862121 158862245 -40767905 - AluJb SINE Alu -186 126 3 23 0 0 0 chr5 158862849 158862872 -40767278 + AT_rich Low_complexity Low_complexity 1 23 0 683 305 31 12 chr5 158862957 158863213 -40766937 - MIR SINE MIR 0 262 2 24 0 0 0 chr5 158864115 158864139 -40766011 + AT_rich Low_complexity Low_complexity 1 24 0 1663 201 49 63 chr5 158864317 158864410 -40765740 - L1MC4 LINE L1 -182 7860 7767 2279 79 7 0 chr5 158864410 158864701 -40765449 + AluY SINE Alu 1 293 -18 1663 201 49 63 chr5 158864701 158865095 -40765055 - L1MC4 LINE L1 -275 7767 7380 3066 167 29 22 chr5 158865100 158865748 -40764402 - L1MA8 LINE L1 0 6291 5639 23 33 0 0 chr5 158865773 158865803 -40764347 + AT_rich Low_complexity Low_complexity 1 30 0 2049 165 20 4 chr5 158865918 158866493 -40763657 + L1M2 LINE L1 5033 5618 -682 637 81 0 0 chr5 158866519 158866605 -40763545 + L1P4 LINE L1 5388 5473 -688 9448 157 7 18 chr5 158866606 158868513 -40761637 + L1PA13 LINE L1 3603 5482 -686 1943 128 0 3 chr5 158868513 158868818 -40761332 + AluSg SINE Alu 1 304 0 9448 157 7 18 chr5 158868818 158869225 -40760925 + L1PA13 LINE L1 5482 5892 -276 963 129 0 23 chr5 158869232 158869403 -40760747 + L1PA13 LINE L1 5996 6162 -1 23 0 0 0 chr5 158869598 158869621 -40760529 + AT_rich Low_complexity Low_complexity 1 23 0 691 242 123 9 chr5 158870123 158870334 -40759816 + MIR SINE MIR 1 235 -27 574 332 34 27 chr5 158873590 158873882 -40756268 - L1MEc LINE L1 -5992 404 111 37 0 0 0 chr5 158873882 158873919 -40756231 + AT_rich Low_complexity Low_complexity 1 37 0 2150 112 0 3 chr5 158873921 158874208 -40755942 - AluSx SINE Alu -24 288 3 668 262 33 19 chr5 158874965 158875179 -40754971 + L1ME3A LINE L1 5703 5919 -251 748 85 0 0 chr5 158875182 158875288 -40754862 + MLT2A1 LTR ERVL 1 106 -338 282 276 135 32 chr5 158875725 158875881 -40754269 - MLT2E LTR ERVL -3 625 454 352 331 28 21 chr5 158875968 158876113 -40754037 - MLT2E LTR ERVL -453 175 30 2016 155 87 129 chr5 158876126 158876669 -40753481 + MLT2B1 LTR ERVL 1 520 0 499 226 57 38 chr5 158877063 158877222 -40752928 - ERVL-E LTR ERVL -333 5431 5270 257 161 4 0 chr5 158877334 158877389 -40752761 - MLT1E1 LTR MaLR 0 654 450 937 229 91 62 chr5 158877519 158877560 -40752590 - MLT2C2 LTR ERVL 0 464 426 261 0 0 0 chr5 158877560 158877589 -40752561 + (TATG)n Simple_repeat Simple_repeat 2 30 0 937 229 91 62 chr5 158877589 158877919 -40752231 - MLT2C2 LTR ERVL -38 426 82 216 274 60 12 chr5 158877958 158878042 -40752108 - MIR SINE MIR -76 186 99 186 357 87 22 chr5 158878120 158878305 -40751845 - MIR SINE MIR -7 255 59 1554 126 156 4 chr5 158878799 158879062 -40751088 - AluSx SINE Alu -9 303 1 416 323 49 23 chr5 158879858 158880128 -40750022 + MLT1L LTR MaLR 227 604 -11 399 242 24 16 chr5 158880201 158880325 -40749825 - MIR SINE MIR -25 237 113 391 338 0 15 chr5 158880452 158880588 -40749562 + MIR SINE MIR 2 135 -127 376 313 124 73 chr5 158880696 158880929 -40749221 - MIR SINE MIR -9 253 9 2277 119 6 0 chr5 158881035 158881346 -40748804 - AluSq SINE Alu 0 313 1 21 36 0 0 chr5 158882727 158882755 -40747395 + AT_rich Low_complexity Low_complexity 1 28 0 700 148 17 0 chr5 158882767 158882896 -40747254 + MER30B DNA MER1_type 4 108 -82 33741 36 3 1 chr5 158882908 158887819 -40742331 - L1PA4 LINE L1 -3 6152 1239 690 110 0 0 chr5 158887822 158887913 -40742237 + MER30B DNA MER1_type 140 230 0 208 251 24 132 chr5 158888115 158888178 -40741972 - L2 LINE L2 -4 3309 3241 1606 101 64 107 chr5 158888178 158888476 -40741674 + AluSx SINE Alu 1 285 -27 208 251 24 132 chr5 158888476 158888579 -40741571 - L2 LINE L2 -72 3241 3161 207 189 0 0 chr5 158888741 158888778 -40741372 + GA-rich Low_complexity Low_complexity 2 38 0 430 328 75 6 chr5 158888828 158889002 -40741148 - L2 LINE L2 -451 2863 2678 21 0 0 0 chr5 158889071 158889092 -40741058 + AT_rich Low_complexity Low_complexity 1 21 0 1201 243 0 0 chr5 158889093 158889373 -40740777 - L1PB4 LINE L1 -4 6152 5873 670 346 60 7 chr5 158889443 158889726 -40740424 + L3 LINE CR1 1273 1570 -7 357 339 8 0 chr5 158891634 158891758 -40738392 - MLT1I LTR MaLR -232 177 53 303 356 84 5 chr5 158891726 158891917 -40738233 - MLT1I LTR MaLR -203 206 1 * 334 291 27 0 chr5 158892008 158892118 -40738032 + MLT1L LTR MaLR 503 615 0 214 351 9 18 chr5 158892129 158892240 -40737910 - L2 LINE L2 -15 3298 3189 884 142 28 7 chr5 158892890 158893031 -40737119 - MSTB LTR MaLR 0 426 283 744 198 32 13 chr5 158893034 158893191 -40736959 + MSTA LTR MaLR 133 292 -136 501 276 40 0 chr5 158893509 158893661 -40736489 + MER117 DNA MER1_type 4 161 -36 1888 105 22 18 chr5 158894270 158894547 -40735603 + AluSq SINE Alu 1 278 -35 186 43 0 0 chr5 158894562 158894585 -40735565 + (TAA)n Simple_repeat Simple_repeat 2 24 0 257 0 0 29 chr5 158894623 158894657 -40735493 + (TAGA)n Simple_repeat Simple_repeat 2 34 0 2348 181 56 26 chr5 158894683 158895147 -40735003 - MLT2B1 LTR ERVL -42 478 1 255 306 63 68 chr5 158895171 158895393 -40734757 - MIR SINE MIR -1 261 41 2271 108 3 0 chr5 158896098 158896403 -40733747 + AluSp SINE Alu 5 310 -3 22 0 0 0 chr5 158896566 158896588 -40733562 + AT_rich Low_complexity Low_complexity 1 22 0 296 331 52 68 chr5 158896841 158897092 -40733058 + MLT1K LTR MaLR 177 423 -165 369 323 132 11 chr5 158898076 158898265 -40731885 + MIR SINE MIR 1 212 -50 184 377 14 0 chr5 158898412 158898481 -40731669 + MIR SINE MIR 4 73 -189 29 47 0 0 chr5 158898482 158898525 -40731625 + AT_rich Low_complexity Low_complexity 1 43 0 281 125 18 0 chr5 158898766 158898822 -40731328 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 658 277 65 87 chr5 158898941 158899482 -40730668 - L1ME3A LINE L1 -304 5866 5338 241 273 53 0 chr5 158899898 158900030 -40730120 - L1ME3A LINE L1 -3210 2936 2798 367 330 89 10 chr5 158900400 158900603 -40729547 - LTR16A LTR ERVL -76 374 156 1438 346 90 43 chr5 158900839 158901719 -40728431 - ERVL LTR ERVL -381 5383 4546 1787 127 9 79 chr5 158901719 158902035 -40728115 - AluSx SINE Alu -18 294 1 1438 346 90 43 chr5 158902035 158902626 -40727524 - ERVL LTR ERVL -1218 4546 3984 714 82 0 0 chr5 158902626 158902724 -40727426 + (TCTA)n Simple_repeat Simple_repeat 3 100 0 1438 346 90 43 chr5 158902724 158903430 -40726720 - ERVL LTR ERVL -1780 3984 3103 1009 159 12 6 chr5 158903535 158903698 -40726452 + MSTB1 LTR MaLR 1 164 -268 2832 230 50 26 chr5 158903992 158904182 -40725968 - L1MD2 LINE L1 -14 6625 6441 342 0 0 0 chr5 158904182 158904220 -40725930 + (TG)n Simple_repeat Simple_repeat 2 39 0 2832 230 50 26 chr5 158904220 158904841 -40725309 - L1MD2 LINE L1 -198 6441 5794 389 213 0 0 chr5 158904844 158904938 -40725212 - L1MA5 LINE L1 0 6300 6207 695 203 90 9 chr5 158904940 158905152 -40724998 - L1MD2 LINE L1 -731 5791 5563 4921 188 34 14 chr5 158905159 158906254 -40723896 - L1MC1 LINE L1 -2 6331 5209 3276 126 69 129 chr5 158906259 158906721 -40723429 - LTR12 LTR ERV1 0 2428 1940 315 0 0 0 chr5 158906721 158906756 -40723394 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3276 126 69 129 chr5 158906756 158906770 -40723380 - LTR12 LTR ERV1 -488 1940 1927 2950 41 19 0 chr5 158906770 158907133 -40723017 - L1PA4 LINE L1 -3 6152 5783 3276 126 69 129 chr5 158907133 158907544 -40722606 - LTR12 LTR ERV1 -501 1927 57 264 231 0 0 chr5 158907544 158907596 -40722554 - LTR30 LTR ERV1 -670 52 1 25380 84 15 8 chr5 158907596 158911098 -40719052 - HERV9 LTR ERV1 0 8399 4872 2757 234 66 55 chr5 158911101 158911829 -40718321 - L1MC1 LINE L1 -942 5204 4458 2138 139 0 0 chr5 158911829 158912131 -40718019 - AluSx SINE Alu -10 302 1 2757 234 66 55 chr5 158912131 158912541 -40717609 - L1MC1 LINE L1 -1688 4458 4054 3134 245 40 78 chr5 158912553 158914143 -40716007 - L1MD2 LINE L1 -860 5566 4038 414 146 22 0 chr5 158914168 158914257 -40715893 - L1MA9 LINE L1 0 6312 6222 269 23 136 0 chr5 158914425 158914469 -40715681 + AluSp/q SINE Alu 248 297 -6 2061 144 3 19 chr5 158914469 158914837 -40715313 + L1MB8 LINE L1 5814 6175 -3 533 162 0 0 chr5 158914988 158915087 -40715063 - FLAM_A SINE Alu -3 139 41 237 363 0 0 chr5 158915220 158915300 -40714850 - MIR SINE MIR 0 262 183 381 289 128 56 chr5 158915395 158915514 -40714636 + MIR SINE MIR 13 151 -111 830 150 0 0 chr5 158915514 158915647 -40714503 + FLAM_C SINE Alu 1 133 0 381 289 128 56 chr5 158915647 158915707 -40714443 + MIR SINE MIR 151 205 -57 186 43 0 0 chr5 158915892 158915915 -40714235 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 356 299 21 0 chr5 158915999 158916096 -40714054 - MIR SINE MIR -93 115 17 2248 97 17 0 chr5 158917238 158917536 -40712614 - AluSx SINE Alu -9 303 1 593 226 66 6 chr5 158917556 158917732 -40712418 - MIR SINE MIR -41 221 34 758 279 78 23 chr5 158917777 158917996 -40712154 - MIR SINE MIR -26 236 6 1742 127 57 23 chr5 158918104 158918404 -40711746 - AluSx SINE Alu -2 310 1 638 203 36 7 chr5 158918978 158919116 -40711034 + MIR3 SINE MIR 66 207 -1 2735 220 62 39 chr5 158920368 158921350 -40708800 - L1MD2 LINE L1 -3873 2734 1695 198 0 0 0 chr5 158921350 158921372 -40708778 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 212 255 0 0 chr5 158921417 158921464 -40708686 + (TGAA)n Simple_repeat Simple_repeat 1 47 0 184 259 112 35 chr5 158923105 158923221 -40706929 + MIR SINE MIR 120 244 -18 1593 178 14 28 chr5 158923338 158923650 -40706500 + AluJo SINE Alu 1 308 0 1298 167 40 4 chr5 158926336 158926563 -40703587 + AluJb SINE Alu 69 303 -9 472 342 98 22 chr5 158926566 158926791 -40703359 + MIR SINE MIR 20 261 -1 283 330 51 8 chr5 158926819 158926937 -40703213 - L2 LINE L2 0 3272 3150 184 341 95 85 chr5 158927041 158927451 -40702699 - L2 LINE L2 -2691 623 210 23 0 0 0 chr5 158927911 158927934 -40702216 + AT_rich Low_complexity Low_complexity 1 23 0 1268 204 7 42 chr5 158927942 158928227 -40701923 + AluJo SINE Alu 29 303 -9 382 256 105 0 chr5 158929572 158929705 -40700445 + MER103 DNA DNA 8 154 -12 540 233 89 6 chr5 158930061 158930241 -40699909 - L1MD2 LINE L1 -14 6345 6151 297 0 0 0 chr5 158930242 158930275 -40699875 + (TG)n Simple_repeat Simple_repeat 2 34 0 2096 276 98 27 chr5 158930544 158931610 -40698540 - L2 LINE L2 -8 3305 2149 655 273 18 6 chr5 158931607 158931772 -40698378 - MIR SINE MIR -20 242 76 * 599 328 70 38 chr5 158932184 158932629 -40697521 - L2 LINE L2 -2 3311 2853 1248 332 63 42 chr5 158933383 158934475 -40695675 - L2 LINE L2 -1 3312 2203 239 357 29 36 chr5 158934478 158934618 -40695532 - MLT1K LTR MaLR -236 352 214 740 236 28 0 chr5 158934830 158935012 -40695138 - MER5A DNA MER1_type -1 188 2 2098 146 19 32 chr5 158935041 158935410 -40694740 - THE1B LTR MaLR 0 364 1 261 222 127 0 chr5 158935869 158935932 -40694218 - L2 LINE L2 -1 3271 3201 198 0 0 0 chr5 158937163 158937185 -40692965 + (T)n Simple_repeat Simple_repeat 1 22 0 261 324 21 35 chr5 158937470 158937612 -40692538 + MIR SINE MIR 69 208 -54 7220 36 2 7 chr5 158937671 158938685 -40691465 + L1PA4 LINE L1 5150 6159 0 699 325 70 18 chr5 158938848 158939236 -40690914 + LTR33 LTR ERVL 22 429 -92 557 316 51 70 chr5 158939766 158940779 -40689371 + L1ME3A LINE L1 4913 5905 -284 183 376 26 34 chr5 158941285 158941402 -40688748 + MIR SINE MIR 46 161 -101 360 306 121 34 chr5 158941570 158941776 -40688374 - MIR SINE MIR -27 235 12 1823 78 0 0 chr5 158941912 158942154 -40687996 - L1PA8 LINE L1 -2 6170 5929 15348 33 10 0 chr5 158942261 158944891 -40685259 + L1PA3 LINE L1 3493 6155 0 268 333 40 40 chr5 158946337 158946463 -40683687 - L2 LINE L2 -20 3293 3168 16150 171 26 23 chr5 158946671 158946861 -40683289 + L1M1 LINE L1 15 203 -7362 2185 132 3 0 chr5 158946861 158947172 -40682978 + AluSx SINE Alu 1 312 0 16150 171 26 23 chr5 158947172 158949410 -40680740 + L1M1 LINE L1 203 2457 -5108 11163 23 8 0 chr5 158949410 158951476 -40678674 + L1PA2 LINE L1 4083 6155 0 16150 171 26 23 chr5 158951476 158952051 -40678099 + L1M1 LINE L1 2457 3029 -4536 4306 42 7 0 chr5 158952043 158952584 -40677566 + L1PA4 LINE L1 4803 5347 -799 * 4719 39 5 0 chr5 158952596 158953164 -40676986 + L1PA4 LINE L1 5574 6144 -11 3433 164 41 26 chr5 158953175 158954297 -40675853 + L1M1 LINE L1 3002 4136 -3429 * 5125 109 74 9 chr5 158954273 158955127 -40675023 + L1MA1 LINE L1 6813 7721 0 21 0 0 0 chr5 158955127 158955148 -40675002 + AT_rich Low_complexity Low_complexity 1 21 0 2236 119 0 0 chr5 158955560 158955862 -40674288 - AluSq SINE Alu -11 302 1 2222 110 0 0 chr5 158956060 158956352 -40673798 - AluSc SINE Alu -17 292 1 401 215 32 55 chr5 158957344 158957492 -40672658 - L1ME4a LINE L1 -294 5827 5682 198 308 33 11 chr5 158957654 158957745 -40672405 - L2 LINE L2 0 3313 3221 23 54 0 0 chr5 158958407 158958444 -40671706 + AT_rich Low_complexity Low_complexity 1 37 0 32 0 0 0 chr5 158958531 158958563 -40671587 + AT_rich Low_complexity Low_complexity 1 32 0 997 340 48 35 chr5 158958705 158959184 -40670966 - MLT1K LTR MaLR -94 494 10 437 354 50 0 chr5 158959204 158959385 -40670765 - MIR SINE MIR -71 191 2 218 337 41 41 chr5 158959644 158959742 -40670408 + L2 LINE L2 3150 3247 -25 492 324 66 19 chr5 158959833 158960046 -40670104 + MIR SINE MIR 40 262 0 242 227 4 27 chr5 158960558 158960632 -40669518 - MLT1K LTR MaLR 0 615 517 814 332 57 18 chr5 158960738 158961124 -40669026 - MLT1K LTR MaLR -160 428 28 1233 181 168 9 chr5 158961261 158961576 -40668574 - MER47A DNA MER2_type -1 365 1 329 324 35 45 chr5 158962771 158962979 -40667171 + MIR SINE MIR 13 216 -46 279 246 14 0 chr5 158963587 158963656 -40666494 - MLT1K LTR MaLR -3 585 516 29246 123 13 17 chr5 158964086 158965768 -40664382 + L1PA7 LINE L1 740 2426 -4043 3448 70 15 2 chr5 158965768 158966225 -40663925 + L1PA7 LINE L1 5691 6154 0 29246 123 13 17 chr5 158966225 158970206 -40659944 + L1PA7 LINE L1 2426 6469 0 261 0 0 0 chr5 158970222 158970251 -40659899 + (CA)n Simple_repeat Simple_repeat 2 30 0 979 67 0 0 chr5 158970895 158971015 -40659135 + AluY SINE Alu 178 297 -14 4743 161 44 7 chr5 158971016 158971906 -40658244 + L1MA8 LINE L1 5359 6281 -10 303 281 238 52 chr5 158972164 158972374 -40657776 + MIR SINE MIR 14 262 0 241 149 0 21 chr5 158973559 158973606 -40656544 - MIR SINE MIR -40 222 177 * 1001 304 124 22 chr5 158973604 158974339 -40655811 - L2 LINE L2 0 3313 2503 329 211 44 18 chr5 158974421 158974535 -40655615 + (TCTA)n Simple_repeat Simple_repeat 2 118 0 465 333 85 0 chr5 158975904 158976093 -40654057 + MIR SINE MIR 3 207 -55 377 330 62 22 chr5 158977405 158977632 -40652518 - MIR SINE MIR -2 260 25 188 284 99 12 chr5 158977782 158977863 -40652287 + MIR3 SINE MIR 115 202 -6 417 315 96 15 chr5 158977977 158978174 -40651976 - MIR SINE MIR -38 224 12 256 331 30 53 chr5 158978727 158978860 -40651290 - L3 LINE CR1 -118 1459 1330 271 357 107 0 chr5 158979026 158979138 -40651012 + L2 LINE L2 3137 3260 -12 262 337 0 0 chr5 158979957 158980040 -40650110 - L2 LINE L2 -1 3312 3230 22 56 0 0 chr5 158981286 158981322 -40648828 + AT_rich Low_complexity Low_complexity 1 36 0 13423 158 29 12 chr5 158981329 158981787 -40648363 + Tigger1 DNA MER2_type 2 451 -1967 5015 144 49 6 chr5 158981787 158982965 -40647185 + L1PA15 LINE L1 4966 6152 -13 13423 158 29 12 chr5 158982965 158984883 -40645267 + Tigger1 DNA MER2_type 451 2418 0 1021 226 0 23 chr5 158985565 158985782 -40644368 + L1MA9 LINE L1 1 212 -6818 2216 252 90 51 chr5 158985825 158986867 -40643283 + L1MA9 LINE L1 1214 2214 -4892 1236 251 3 30 chr5 158986867 158987162 -40642988 + AluJo SINE Alu 1 287 -15 2216 252 90 51 chr5 158987162 158988878 -40641272 + L1MA9 LINE L1 2214 3730 -3376 2315 67 0 7 chr5 158988878 158989175 -40640975 + AluY SINE Alu 1 295 -16 2216 252 90 51 chr5 158989175 158989291 -40640859 + L1MA9 LINE L1 3730 3840 -3266 * 12109 35 1 5 chr5 158989288 158990794 -40639356 - L1PA3 LINE L1 -2122 4024 2526 11176 26 6 2 chr5 158990794 158992905 -40637245 + L1PA3 LINE L1 4037 6154 -1 9552 202 60 6 chr5 158992906 158994374 -40635776 + L1MA9 LINE L1 3831 5218 -2054 2050 134 0 19 chr5 158994374 158994688 -40635462 + AluSg SINE Alu 1 308 -2 9552 202 60 6 chr5 158994688 158996458 -40633692 + L1MA9 LINE L1 5218 7250 -22 7645 219 23 11 chr5 158996453 158998391 -40631759 + L1PB4 LINE L1 3276 5236 -910 * 665 79 0 0 chr5 158998391 158998480 -40631670 - L1PA8 LINE L1 -315 5857 5769 3848 159 127 8 chr5 158998505 158999343 -40630807 + L1PB4 LINE L1 5208 6145 -11 479 288 101 53 chr5 158999364 158999798 -40630352 - L1M4 LINE L1 -1077 5069 4615 234 229 53 76 chr5 158999852 158999983 -40630167 - L1M4 LINE L1 -2214 3932 3805 422 126 52 0 chr5 159000377 159000512 -40629638 + (TA)n Simple_repeat Simple_repeat 1 142 0 624 282 0 7 chr5 159000516 159000665 -40629485 + MER63A DNA MER1_type 34 181 -29 388 287 37 83 chr5 159000731 159001079 -40629071 - L1M4 LINE L1 -2911 3235 2904 186 118 0 0 chr5 159001188 159001222 -40628928 + (TC)n Simple_repeat Simple_repeat 1 34 0 204 356 8 25 chr5 159001437 159001555 -40628595 + L2 LINE L2 3003 3118 -195 259 222 49 37 chr5 159002360 159002441 -40627709 + MIR SINE MIR 181 262 0 368 311 31 25 chr5 159003913 159004074 -40626076 - MER5B DNA MER1_type -13 165 4 478 240 23 31 chr5 159004754 159004883 -40625267 - L2 LINE L2 -4 3309 3182 344 336 15 23 chr5 159005116 159005247 -40624903 + MIR3 SINE MIR 31 160 -48 704 250 21 21 chr5 159005248 159005436 -40624714 + MER5A DNA MER1_type 2 189 0 608 259 0 0 chr5 159006448 159006579 -40623571 + MIR SINE MIR 58 188 -74 350 259 133 30 chr5 159006782 159006917 -40623233 - MLT1K LTR MaLR -8 580 432 339 296 97 35 chr5 159007116 159007342 -40622808 - MLT1K LTR MaLR -303 285 46 409 374 55 16 chr5 159007458 159007640 -40622510 + MER5A DNA MER1_type 1 189 0 384 257 151 7 chr5 159007922 159008074 -40622076 + MIR SINE MIR 86 259 -3 * 462 298 33 13 chr5 159008063 159008214 -40621936 - MIR SINE MIR -34 228 75 456 19 0 0 chr5 159009292 159009345 -40620805 + (CA)n Simple_repeat Simple_repeat 2 54 0 298 262 73 63 chr5 159009451 159009657 -40620493 - MLT1K LTR MaLR -8 580 373 502 148 10 30 chr5 159010553 159010654 -40619496 + MER53 DNA DNA 3 101 -88 629 309 33 14 chr5 159010758 159010968 -40619182 + MIR SINE MIR 35 248 -14 231 349 0 0 chr5 159011367 159011433 -40618717 + L2 LINE L2 3198 3263 -9 276 200 0 0 chr5 159011623 159011673 -40618477 + MER94 DNA DNA 85 134 0 232 316 41 10 chr5 159011900 159011998 -40618152 - MIR3 SINE MIR -2 206 106 804 251 14 29 chr5 159012075 159012282 -40617868 + MER58A DNA MER1_type 11 214 -10 449 259 184 22 chr5 159012537 159012722 -40617428 - MIR SINE MIR -47 215 1 302 391 99 12 chr5 159013787 159014030 -40616120 - L1MEc LINE L1 -5963 433 170 2648 161 12 10 chr5 159014048 159014533 -40615617 - L1MA4 LINE L1 -12 6288 5803 596 213 40 20 chr5 159014557 159014707 -40615443 - L1 LINE L1 -2177 3969 3817 526 215 0 8 chr5 159014702 159014823 -40615327 - L1MA4 LINE L1 -1210 4936 4817 * 2773 238 36 11 chr5 159014791 159015578 -40614572 - L1 LINE L1 -2983 3163 2358 891 208 20 8 chr5 159015575 159015820 -40614330 + L1 LINE L1 3167 3414 -2732 * 23 0 0 0 chr5 159016142 159016165 -40613985 + AT_rich Low_complexity Low_complexity 1 23 0 769 296 52 50 chr5 159016315 159016758 -40613392 - MLT1J1 LTR MaLR 0 446 3 643 285 167 14 chr5 159016915 159017339 -40612811 - L2 LINE L2 -208 3105 2621 1407 256 96 10 chr5 159017402 159017849 -40612301 - L1ME1 LINE L1 -7 6159 5665 378 0 0 0 chr5 159017849 159017891 -40612259 + (TG)n Simple_repeat Simple_repeat 1 42 0 1407 256 96 10 chr5 159017891 159017932 -40612218 - L1ME1 LINE L1 -501 5665 5629 866 195 77 85 chr5 159017942 159018242 -40611908 - AluJo SINE Alu 0 336 39 219 350 0 0 chr5 159018335 159018395 -40611755 - L2 LINE L2 -50 3263 3204 438 346 191 3 chr5 159018413 159018737 -40611413 - L2 LINE L2 -31 3282 2898 393 330 77 95 chr5 159019950 159020380 -40609770 + HAL1 LINE L1 67 488 -2019 496 309 94 25 chr5 159020909 159021184 -40608966 + MLT1K LTR MaLR 182 475 -113 1510 260 161 2 chr5 159021538 159022103 -40608047 + L2 LINE L2 1831 2485 -829 631 272 31 16 chr5 159022081 159022272 -40607878 + L2 LINE L2 2889 3082 -231 * 627 304 19 19 chr5 159022246 159022453 -40607697 + MIR SINE MIR 10 216 -46 * 1140 229 4 11 chr5 159023216 159023483 -40606667 + AluJo SINE Alu 39 303 -9 34 79 0 0 chr5 159023519 159023595 -40606555 + AT_rich Low_complexity Low_complexity 1 76 0 4851 307 62 21 chr5 159023928 159026196 -40603954 + L1M3d LINE L1 301 2020 -1073 3840 232 56 18 chr5 159026209 159027675 -40602475 + L1 LINE L1 3455 5076 -1656 1308 225 94 9 chr5 159027682 159028002 -40602148 - MER7A DNA MER2_type -1 345 1 292 143 36 0 chr5 159028002 159028058 -40602092 + L1 LINE L1 4500 4557 -1589 324 369 22 1 chr5 159028071 159028217 -40601933 - MIR SINE MIR -69 139 7 447 310 14 14 chr5 159030393 159030538 -40599612 - L2 LINE L2 -1 3312 3168 4568 51 7 2 chr5 159031177 159031746 -40598404 - L1PA5 LINE L1 -4 6150 5579 2516 111 0 17 chr5 159032821 159033181 -40596969 + THE1A LTR MaLR 1 354 -1 11063 108 5 0 chr5 159033183 159034754 -40595396 + THE1A-int LTR MaLR 2 1580 0 2646 88 8 3 chr5 159034754 159035107 -40595043 + THE1A LTR MaLR 1 355 0 220 265 15 59 chr5 159035850 159035918 -40594232 - L2 LINE L2 -10 3262 3198 450 290 42 55 chr5 159036706 159036923 -40593227 + MIR SINE MIR 1 214 -48 30 0 0 0 chr5 159037387 159037417 -40592733 + AT_rich Low_complexity Low_complexity 1 30 0 232 235 151 50 chr5 159038185 159038304 -40591846 - LTR16A1 LTR ERVL -311 146 16 708 309 10 0 chr5 159038467 159038674 -40591476 + MER63A DNA MER1_type 2 210 0 5885 206 56 43 chr5 159038878 159039309 -40590841 + L1MB1 LINE L1 3521 3945 -2223 2790 126 16 26 chr5 159039309 159039803 -40590347 + L1MA4A LINE L1 5804 6292 -11 5885 206 56 43 chr5 159039803 159041981 -40588169 + L1MB1 LINE L1 3945 6167 -1 212 279 154 73 chr5 159042382 159042518 -40587632 - MIR SINE MIR 0 262 116 280 213 25 12 chr5 159042981 159043061 -40587089 - LTR67 LTR ERVL 0 557 477 946 215 28 19 chr5 159043195 159043409 -40586741 - MLT1C LTR MaLR 0 467 252 1148 176 42 82 chr5 159043412 159043718 -40586432 - MLT1C LTR MaLR -173 294 1 180 0 0 0 chr5 159043724 159043744 -40586406 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 1741 175 3 0 chr5 159043749 159044034 -40586116 + AluJb SINE Alu 1 286 -26 186 43 0 0 chr5 159044037 159044060 -40586090 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9746 99 1 3 chr5 159044163 159045573 -40584577 - L1PA6 LINE L1 -2223 3923 2517 9999 99 2 0 chr5 159045573 159047772 -40582378 + L1PA6 LINE L1 3935 6141 -13 623 232 75 75 chr5 159047786 159048148 -40582002 + L1M4 LINE L1 4416 4777 -1369 * 2679 219 11 6 chr5 159048146 159048777 -40581373 - L1 LINE L1 -873 5273 4640 4897 153 35 7 chr5 159048800 159049676 -40580474 + L1PB4 LINE L1 5254 6154 -2 2764 271 94 28 chr5 159049772 159050494 -40579656 - L1ME1 LINE L1 -5 6421 5748 186 43 0 0 chr5 159050494 159050517 -40579633 + (TC)n Simple_repeat Simple_repeat 2 24 0 2059 119 0 0 chr5 159050523 159050800 -40579350 - AluSx SINE Alu -35 277 1 2764 271 94 28 chr5 159050800 159052232 -40577918 - L1ME1 LINE L1 -682 5744 3894 207 69 0 0 chr5 159052232 159052261 -40577889 + (TG)n Simple_repeat Simple_repeat 1 29 0 2764 271 94 28 chr5 159052261 159053052 -40577098 - L1ME1 LINE L1 -2532 3894 3156 7967 36 1 0 chr5 159053061 159054801 -40575349 - L1PA3 LINE L1 0 6155 4415 9290 36 0 0 chr5 159054801 159055925 -40574225 + L1PA3 LINE L1 3289 4412 -1734 1764 269 58 45 chr5 159055921 159056158 -40573992 - L1ME1 LINE L1 -3217 3189 2957 * 767 273 23 5 chr5 159056158 159056374 -40573776 - MER58A DNA MER1_type -1 223 4 1764 269 58 45 chr5 159056374 159057532 -40572618 - L1ME1 LINE L1 -3449 2957 1817 1419 246 135 42 chr5 159057533 159058231 -40571919 - L1ME3 LINE L1 0 6162 5400 1200 248 11 14 chr5 159058404 159058686 -40571464 - L1PA16 LINE L1 -2 6164 5884 3729 156 6 24 chr5 159058719 159059543 -40570607 - L1PA16 LINE L1 -262 5904 5096 1407 219 94 6 chr5 159061136 159061464 -40568686 + MLT1A1 LTR MaLR 1 357 -8 3451 204 6 16 chr5 159061464 159062130 -40568020 + MLT1A1-int LTR MaLR 4 662 -1073 284 183 56 42 chr5 159062181 159062252 -40567898 + MLT1A1-int LTR MaLR 819 890 -481 497 211 10 0 chr5 159062306 159062410 -40567740 + MLT1A1-int LTR MaLR 679 783 -952 2120 244 67 28 chr5 159062441 159063022 -40567128 + MLT1A1-int LTR MaLR 1131 1734 -1 796 240 37 23 chr5 159063026 159063243 -40566907 + MLT1A1 LTR MaLR 4 223 -142 1524 219 99 2 chr5 159063251 159063717 -40566433 - MLT2B3 LTR ERVL -8 507 1 454 195 71 9 chr5 159063721 159063834 -40566316 + MLT1A1 LTR MaLR 239 358 -16 265 67 156 0 chr5 159063841 159063886 -40566264 + MLT1A1 LTR MaLR 321 372 -2 315 273 10 10 chr5 159064293 159064424 -40565726 - L1ME1 LINE L1 -4753 1574 1148 1797 223 54 30 chr5 159064610 159065019 -40565131 - L1 LINE L1 -1225 4921 4496 1975 139 0 0 chr5 159065019 159065300 -40564850 - AluSx SINE Alu -31 281 1 1797 223 54 30 chr5 159065300 159065388 -40564762 - L1 LINE L1 -1650 4496 4412 * 1980 186 56 39 chr5 159065383 159066429 -40563721 + L1MA9 LINE L1 5151 6200 -112 180 0 0 0 chr5 159066429 159066449 -40563701 + (CA)n Simple_repeat Simple_repeat 1 20 0 1980 186 56 39 chr5 159066449 159066563 -40563587 + L1MA9 LINE L1 6200 6311 -1 1110 332 89 8 chr5 159066612 159067346 -40562804 + L2 LINE L2 2519 3309 -4 295 299 43 51 chr5 159068225 159068342 -40561808 - L3 LINE CR1 -441 1136 1021 656 275 96 6 chr5 159068368 159068535 -40561615 - MIR3 SINE MIR -11 197 16 288 337 33 54 chr5 159068573 159068757 -40561393 - MER5A DNA MER1_type -3 186 7 212 294 35 35 chr5 159068856 159068941 -40561209 + MIR SINE MIR 63 147 -115 269 330 35 10 chr5 159069872 159070000 -40560150 + MIR SINE MIR 22 149 -63 31 44 0 0 chr5 159070034 159070079 -40560071 + AT_rich Low_complexity Low_complexity 1 45 0 210 71 0 0 chr5 159070128 159070156 -40559994 + (CAT)n Simple_repeat Simple_repeat 3 30 0 4413 169 31 4 chr5 159071052 159071896 -40558254 + L1MA8 LINE L1 5423 6289 -2 387 259 119 54 chr5 159071963 159072257 -40557893 - L1ME4a LINE L1 -210 5911 5599 708 351 137 21 chr5 159073198 159073776 -40556374 + L2 LINE L2 2113 2757 -557 218 296 11 34 chr5 159073838 159073926 -40556224 + L2 LINE L2 2867 2952 -320 1930 116 31 7 chr5 159074029 159074322 -40555828 - AluSx SINE Alu -12 300 1 22 35 0 0 chr5 159074432 159074461 -40555689 + AT_rich Low_complexity Low_complexity 1 29 0 1569 178 31 96 chr5 159074492 159074909 -40555241 - MLT1B LTR MaLR 0 390 1 183 286 121 11 chr5 159074909 159074991 -40555159 + L2 LINE L2 3213 3307 -6 539 258 128 52 chr5 159075375 159075924 -40554226 + MLT1G LTR MaLR 6 549 -6 1067 206 75 35 chr5 159077120 159077402 -40552748 + MER63C DNA MER1_type 254 546 -384 21 0 0 0 chr5 159078493 159078514 -40551636 + AT_rich Low_complexity Low_complexity 1 21 0 199 319 88 50 chr5 159081080 159081240 -40548910 + L3 LINE CR1 596 761 -816 209 353 10 39 chr5 159081551 159081653 -40548497 - L2 LINE L2 -18 3295 3197 319 319 62 14 chr5 159081721 159081865 -40548285 + MIR SINE MIR 55 205 -57 486 290 75 40 chr5 159082242 159082494 -40547656 + MIR SINE MIR 2 262 0 362 251 58 48 chr5 159082496 159082703 -40547447 - L1M4 LINE L1 -3279 2867 2659 345 250 74 20 chr5 159083089 159083237 -40546913 + L2 LINE L2 3117 3272 -41 548 320 20 10 chr5 159083274 159083471 -40546679 + MIR SINE MIR 40 238 -24 * 616 308 32 103 chr5 159083458 159083926 -40546224 - L2 LINE L2 -35 3278 2844 191 255 21 0 chr5 159083982 159084029 -40546121 + MIR SINE MIR 210 257 -5 326 311 72 40 chr5 159084737 159084988 -40545162 + MLT1K LTR MaLR 321 579 -9 1288 195 135 31 chr5 159085324 159085871 -40544279 - MER67C LTR ERV1 0 514 1 554 335 98 10 chr5 159086456 159086844 -40543306 - L1MC/D LINE L1 -2038 5770 5349 1621 195 0 3 chr5 159086913 159087200 -40542950 - AluJo SINE Alu -26 286 1 182 91 30 0 chr5 159087784 159087817 -40542333 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 237 336 110 27 chr5 159088702 159088848 -40541302 - MIR3 SINE MIR -6 202 45 335 318 73 63 chr5 159088870 159089172 -40540978 - MER102b DNA MER1_type -16 325 21 3622 108 114 53 chr5 159089535 159089827 -40540323 + MER4E LTR ERV1 1 274 -492 1958 122 0 0 chr5 159089827 159090090 -40540060 - AluSp SINE Alu -7 306 44 3622 108 114 53 chr5 159090090 159090517 -40539633 + MER4E LTR ERV1 274 764 -2 283 239 31 85 chr5 159090590 159090720 -40539430 + MLT1H LTR MaLR 411 533 -16 239 293 124 0 chr5 159090730 159090816 -40539334 - MIR SINE MIR -103 105 11 221 214 0 0 chr5 159091455 159091497 -40538653 + MIR SINE MIR 141 182 -80 204 135 0 0 chr5 159091508 159091545 -40538605 + (CA)n Simple_repeat Simple_repeat 2 38 0 1492 180 69 7 chr5 159091559 159091730 -40538420 - AluJo SINE Alu -5 307 109 277 23 23 23 chr5 159091730 159091773 -40538377 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 1492 180 69 7 chr5 159091773 159091890 -40538260 - AluJo SINE Alu -203 109 1 367 257 236 7 chr5 159092272 159092420 -40537730 - MER5A DNA MER1_type -3 186 5 498 266 102 0 chr5 159092431 159092559 -40537591 - MER5A DNA MER1_type 0 189 49 248 225 112 0 chr5 159092725 159092814 -40537336 + MER103 DNA DNA 9 107 -59 234 374 41 14 chr5 159093018 159093165 -40536985 + L3 LINE CR1 1427 1577 0 2560 142 52 17 chr5 159093278 159093794 -40536356 - L1MA9 LINE L1 -4 6308 5775 24 0 0 0 chr5 159093820 159093844 -40536306 + AT_rich Low_complexity Low_complexity 1 24 0 1993 100 0 11 chr5 159093844 159094114 -40536036 + AluSx SINE Alu 39 305 -7 1697 145 119 25 chr5 159094117 159094511 -40535639 + L1 LINE L1 4265 4695 -1451 2887 287 80 88 chr5 159094569 159094628 -40535522 + L2 LINE L2 1479 1537 -1776 2076 123 3 3 chr5 159094628 159094928 -40535222 - AluSp SINE Alu -13 300 1 2887 287 80 88 chr5 159094928 159096231 -40533919 + L2 LINE L2 1537 2824 -489 1582 142 0 4 chr5 159096231 159096464 -40533686 - AluSg SINE Alu -30 280 49 2887 287 80 88 chr5 159096464 159096835 -40533315 + L2 LINE L2 2824 3197 -116 2555 224 38 27 chr5 159096941 159097768 -40532382 - L1ME1 LINE L1 -110 6056 5219 380 269 55 128 chr5 159098577 159098796 -40531354 - MIR SINE MIR -12 250 48 26 82 0 0 chr5 159099206 159099267 -40530883 + AT_rich Low_complexity Low_complexity 1 61 0 895 313 26 26 chr5 159099310 159099661 -40530489 - L2 LINE L2 -36 3277 2927 579 290 112 15 chr5 159099663 159099922 -40530228 - L2 LINE L2 -1034 2280 1997 326 393 18 13 chr5 159099924 159100148 -40530002 + L2 LINE L2 2646 2870 -444 490 305 29 52 chr5 159100148 159100322 -40529828 - L2 LINE L2 0 3313 3144 435 264 0 0 chr5 159100321 159100412 -40529738 + L2 LINE L2 3200 3290 -23 * 5020 34 0 0 chr5 159100528 159101121 -40529029 - L1P LINE L1 -1859 4287 3695 7264 47 2 0 chr5 159101122 159102638 -40527512 + L1PA5 LINE L1 4637 6154 0 2241 79 0 17 chr5 159102656 159102947 -40527203 + AluY SINE Alu 1 286 -25 224 30 30 0 chr5 159102951 159102984 -40527166 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 218 217 0 0 chr5 159103551 159103597 -40526553 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 387 290 130 10 chr5 159105087 159105294 -40524856 + MIR SINE MIR 31 262 0 833 244 51 72 chr5 159105678 159106010 -40524140 + MLT1D LTR MaLR 1 325 -180 283 222 0 141 chr5 159106033 159106081 -40524069 + MER20 DNA MER1_type 1 31 -188 1493 175 10 45 chr5 159106081 159106491 -40523659 + AluJb SINE Alu 1 400 0 283 222 0 141 chr5 159106491 159106540 -40523610 + MER20 DNA MER1_type 31 85 -134 210 37 0 0 chr5 159106563 159106590 -40523560 + (TG)n Simple_repeat Simple_repeat 2 28 0 411 191 0 40 chr5 159106590 159106737 -40523413 + (TA)n Simple_repeat Simple_repeat 2 142 0 200 176 0 0 chr5 159106743 159106777 -40523373 + (TG)n Simple_repeat Simple_repeat 2 35 0 225 0 0 0 chr5 159106777 159106802 -40523348 + (CA)n Simple_repeat Simple_repeat 2 26 0 812 221 6 6 chr5 159106813 159106985 -40523165 + MLT1D LTR MaLR 334 505 0 1608 286 48 37 chr5 159107106 159107392 -40522758 - L2 LINE L2 -662 2652 2371 1919 147 0 0 chr5 159107392 159107665 -40522485 + AluSx SINE Alu 1 273 -39 1608 286 48 37 chr5 159107665 159108026 -40522124 - L2 LINE L2 -943 2371 1998 479 220 37 9 chr5 159108095 159108204 -40521946 - MER20 DNA MER1_type 0 219 108 227 315 0 0 chr5 159108238 159108311 -40521839 + L1MC4 LINE L1 6614 6686 -1356 213 108 0 0 chr5 159109088 159109125 -40521025 + (ATG)n Simple_repeat Simple_repeat 3 39 0 2203 268 127 24 chr5 159109135 159110109 -40520041 - L2 LINE L2 -2 3311 2212 583 252 47 72 chr5 159110209 159110740 -40519410 + L1MC5 LINE L1 7408 7925 -36 2128 120 3 0 chr5 159110749 159111049 -40519101 + AluSq SINE Alu 1 301 -12 303 243 58 39 chr5 159111073 159111176 -40518974 + L2 LINE L2 3196 3300 -13 1369 226 6 9 chr5 159111805 159112123 -40518027 - MER45B DNA AcHobo -2 1038 722 1248 286 153 66 chr5 159112236 159112950 -40517200 - MER45C DNA AcHobo -174 779 4 195 212 0 0 chr5 159113412 159113445 -40516705 - L2 LINE L2 -17 3255 3223 21 57 0 0 chr5 159113558 159113593 -40516557 + AT_rich Low_complexity Low_complexity 1 35 0 288 28 0 0 chr5 159113621 159113657 -40516493 + MER53 DNA DNA 149 184 -5 21 36 0 0 chr5 159114486 159114514 -40515636 + AT_rich Low_complexity Low_complexity 1 28 0 224 238 0 0 chr5 159115850 159115892 -40514258 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 225 180 0 0 chr5 159115893 159115943 -40514207 + (TGGA)n Simple_repeat Simple_repeat 4 53 0 325 315 35 14 chr5 159115947 159116090 -40514060 + Charlie8 DNA MER1_type 120 265 -2152 255 215 215 0 chr5 159116969 159117062 -40513088 + MIR SINE MIR 117 229 -33 2476 77 0 0 chr5 159117139 159117450 -40512700 + AluY SINE Alu 1 311 0 687 279 73 14 chr5 159117699 159117805 -40512345 + L1MC/D LINE L1 5339 5437 -761 252 0 0 0 chr5 159117805 159117833 -40512317 + (CA)n Simple_repeat Simple_repeat 2 29 0 687 279 73 14 chr5 159117833 159117987 -40512163 + L1MC/D LINE L1 5437 5618 -580 6091 107 3 9 chr5 159118213 159119745 -40510405 - L1PA13 LINE L1 -5 6158 4630 2213 0 0 0 chr5 159119745 159119991 -40510159 - L1PA2 LINE L1 -1 6154 5909 2343 261 55 52 chr5 159120023 159120895 -40509255 + L1M4b LINE L1 60 934 -5925 1376 196 38 54 chr5 159121440 159121884 -40508266 + L1M4b LINE L1 1239 1675 -5184 212 120 0 40 chr5 159121926 159121976 -40508174 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 354 379 63 5 chr5 159122022 159122212 -40507938 - L2 LINE L2 -181 3091 2891 625 354 67 38 chr5 159122459 159122906 -40507244 + L2 LINE L2 2813 3272 0 973 199 93 32 chr5 159123030 159123467 -40506683 + MLT1D LTR MaLR 1 497 -8 297 109 0 0 chr5 159124127 159124173 -40505977 + (A)n Simple_repeat Simple_repeat 1 46 0 2601 322 85 35 chr5 159125605 159126958 -40503192 + ERVL LTR ERVL 1766 3186 -2578 1245 317 51 22 chr5 159127059 159127814 -40502336 + ERVL LTR ERVL 3322 4123 -1641 789 314 102 23 chr5 159128045 159128484 -40501666 + ERVL LTR ERVL 4408 4811 -674 216 0 0 0 chr5 159128484 159128508 -40501642 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 789 314 102 23 chr5 159128508 159128870 -40501280 + ERVL LTR ERVL 4811 5271 -214 189 300 88 0 chr5 159129106 159129186 -40500964 + MIR3 SINE MIR 112 198 -10 21 57 0 0 chr5 159130448 159130483 -40499667 + AT_rich Low_complexity Low_complexity 1 35 0 798 140 0 0 chr5 159131019 159131133 -40499017 - MSTB1 LTR MaLR -318 114 1 425 288 201 15 chr5 159131766 159132191 -40497959 - L2 LINE L2 -55 3258 2702 1196 214 123 36 chr5 159132205 159132626 -40497524 - L1ME1 LINE L1 -27 6139 5682 216 0 0 0 chr5 159132656 159132680 -40497470 + (T)n Simple_repeat Simple_repeat 1 24 0 760 28 0 65 chr5 159132717 159132825 -40497325 + L1PA4 LINE L1 6055 6155 0 825 263 40 5 chr5 159132838 159133062 -40497088 - L1ME1 LINE L1 -476 5690 5459 926 301 103 73 chr5 159133063 159133705 -40496445 - L2 LINE L2 -601 2713 2053 1009 340 60 22 chr5 159134183 159134816 -40495334 + L2 LINE L2 2658 3312 -1 526 111 0 0 chr5 159135492 159135564 -40494586 + MLT1C LTR MaLR 1 72 -395 243 88 0 0 chr5 159135925 159135959 -40494191 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 507 298 88 13 chr5 159136146 159136384 -40493766 - L2 LINE L2 -668 2646 2391 485 135 6 17 chr5 159137789 159137872 -40492278 + THE1B LTR MaLR 279 364 0 2584 195 20 2 chr5 159138207 159138654 -40491496 + LTR32 LTR ERVL 17 471 0 444 291 71 45 chr5 159138999 159139230 -40490920 - MIR SINE MIR -21 241 4 707 233 124 10 chr5 159139701 159139894 -40490256 + MER58C DNA MER1_type 1 215 0 232 269 81 108 chr5 159140317 159140577 -40489573 - LTR16A LTR ERVL -4 446 194 2073 113 50 0 chr5 159140656 159140938 -40489212 - AluSx SINE Alu -16 296 1 627 294 127 17 chr5 159141434 159141733 -40488417 + L2 LINE L2 2638 2969 -345 1665 205 22 8 chr5 159141755 159142126 -40488024 - L1MD3 LINE L1 -11 7984 7609 532 272 152 50 chr5 159142161 159142444 -40487706 + L2 LINE L2 2998 3309 -4 207 299 75 82 chr5 159143285 159143419 -40486731 - L2 LINE L2 -6 3266 3134 524 384 119 6 chr5 159143603 159144134 -40486016 - L2 LINE L2 -896 2418 1828 1438 169 42 109 chr5 159144405 159144837 -40485313 - MER57A LTR ERV1 0 403 1 303 255 57 9 chr5 159145327 159145433 -40484717 - L1ME2 LINE L1 -3 6161 6051 7598 190 14 45 chr5 159145494 159147240 -40482910 - L1PA16 LINE L1 -5 6161 4363 252 0 0 0 chr5 159147240 159147268 -40482882 + (TG)n Simple_repeat Simple_repeat 2 29 0 7598 190 14 45 chr5 159147268 159147448 -40482702 - L1PA16 LINE L1 -1803 4363 4179 6214 70 1 2 chr5 159147448 159148251 -40481899 + L1PA7 LINE L1 5338 6141 -13 7598 190 14 45 chr5 159148251 159149007 -40481143 - L1PA16 LINE L1 -1987 4179 3582 1392 224 31 14 chr5 159149007 159149293 -40480857 - AluJb SINE Alu -21 291 1 7598 190 14 45 chr5 159149293 159149555 -40480595 - L1PA16 LINE L1 -2584 3582 3314 1542 256 103 12 chr5 159149555 159150305 -40479845 - L1ME2 LINE L1 -176 5988 5161 1019 306 25 41 chr5 159150306 159150871 -40479279 + L1MEc LINE L1 1535 2090 -4306 2843 246 39 38 chr5 159150892 159151779 -40478371 + L1MEc LINE L1 2730 3620 -2595 1342 199 46 21 chr5 159151779 159152060 -40478090 + AluJb SINE Alu 1 288 -14 2843 246 39 38 chr5 159152060 159152210 -40477940 + L1MEc LINE L1 3620 3768 -2447 * 3279 3 0 0 chr5 159152208 159152573 -40477577 + L1HS LINE L1 5791 6155 0 4169 209 38 37 chr5 159152575 159153148 -40477002 + L1MEc LINE L1 3753 4324 -1891 303 93 0 0 chr5 159153148 159153191 -40476959 + (CA)n Simple_repeat Simple_repeat 2 44 0 4169 209 38 37 chr5 159153191 159153815 -40476335 + L1MEc LINE L1 4324 4952 -1263 469 306 36 9 chr5 159153935 159154272 -40475878 - L1ME2 LINE L1 -2767 3379 3034 210 372 0 0 chr5 159154396 159154490 -40475660 - MIR SINE MIR -123 139 46 6807 66 22 0 chr5 159154881 159155807 -40474343 - L1PA7 LINE L1 0 6154 5221 1485 94 5 15 chr5 159155808 159156011 -40474139 + AluY SINE Alu 1 201 -110 371 103 17 0 chr5 159156011 159156069 -40474081 + AluY SINE Alu 237 295 -5 2492 73 0 0 chr5 159156069 159156399 -40473751 - L1PA7 LINE L1 -924 5222 4893 * 8052 91 7 0 chr5 159156393 159157522 -40472628 + L1PA7 LINE L1 3758 4894 -1252 26 82 0 0 chr5 159158278 159158339 -40471811 + AT_rich Low_complexity Low_complexity 1 61 0 2058 216 20 0 chr5 159158354 159158762 -40471388 + MER47B DNA MER2_type 3 418 0 258 56 0 0 chr5 159158803 159158839 -40471311 + (TG)n Simple_repeat Simple_repeat 1 36 0 715 193 67 7 chr5 159158948 159159098 -40471052 + MER6B DNA MER2_type 52 210 0 33 25 0 0 chr5 159160398 159160438 -40469712 + AT_rich Low_complexity Low_complexity 1 40 0 489 300 42 4 chr5 159161470 159161692 -40468458 - L1MC/D LINE L1 -304 5817 5594 624 254 88 9 chr5 159161899 159162116 -40468034 + MLT1J2 LTR MaLR 1 234 -216 456 322 104 5 chr5 159162533 159162735 -40467415 - MIR SINE MIR 0 262 41 188 189 0 0 chr5 159162770 159162807 -40467343 + MIR SINE MIR 152 188 -74 280 307 134 30 chr5 159163546 159163748 -40466402 - MIR SINE MIR 0 262 40 703 318 46 8 chr5 159163835 159164074 -40466076 - MIR SINE MIR -11 251 4 2044 103 0 64 chr5 159164801 159165112 -40465038 + AluSq SINE Alu 1 291 -22 252 324 15 0 chr5 159165491 159165559 -40464591 - L2 LINE L2 -3 3269 3201 1520 234 66 18 chr5 159165819 159166260 -40463890 - MLT1C LTR MaLR 0 467 6 324 363 113 14 chr5 159166361 159166714 -40463436 - L2 LINE L2 -424 2890 2503 391 339 165 15 chr5 159166991 159167318 -40462832 - MLT1K LTR MaLR -116 472 97 195 162 0 0 chr5 159167499 159167536 -40462614 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 205 399 36 30 chr5 159167726 159167998 -40462152 - L2 LINE L2 -204 3068 2791 21 36 0 0 chr5 159168200 159168228 -40461922 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr5 159169055 159169081 -40461069 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 337 354 56 19 chr5 159169225 159169386 -40460764 - MIR SINE MIR -77 185 19 397 320 75 0 chr5 159169808 159169955 -40460195 + MIR SINE MIR 75 232 -30 183 42 0 0 chr5 159170593 159170617 -40459533 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1893 189 31 11 chr5 159170649 159171031 -40459119 - MLT1B LTR MaLR 0 390 1 578 337 96 4 chr5 159171968 159172447 -40457703 + L2 LINE L2 2721 3253 -60 222 37 0 0 chr5 159172463 159172490 -40457660 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 424 292 68 12 chr5 159173508 159173669 -40456481 - L2 LINE L2 -643 2671 2502 552 42 0 0 chr5 159174711 159174782 -40455368 + (TC)n Simple_repeat Simple_repeat 2 72 0 189 0 0 0 chr5 159174781 159174802 -40455348 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 264 300 131 23 chr5 159175119 159175249 -40454901 + L1ME LINE L1 5524 5667 -454 26 30 0 0 chr5 159175309 159175342 -40454808 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 159175459 159175482 -40454668 + AT_rich Low_complexity Low_complexity 1 23 0 201 259 0 19 chr5 159175517 159175571 -40454579 + L2 LINE L2 3261 3313 0 656 287 32 19 chr5 159176239 159176455 -40453695 - MIR SINE MIR -26 236 18 256 200 0 77 chr5 159176508 159176573 -40453577 + L2 LINE L2 3254 3313 0 1296 273 76 32 chr5 159176627 159177099 -40453051 - MLT1F1 LTR MaLR -12 555 63 2873 108 25 35 chr5 159177233 159177716 -40452434 - L1MA9 LINE L1 -353 5959 5482 1991 162 16 14 chr5 159177716 159178084 -40452066 + L1MA9 LINE L1 5942 6312 0 309 288 0 0 chr5 159178248 159178321 -40451829 + L2 LINE L2 3240 3312 -1 207 310 0 0 chr5 159179066 159179124 -40451026 + (CA)n Simple_repeat Simple_repeat 1 58 0 37 0 0 0 chr5 159180634 159180671 -40449479 + AT_rich Low_complexity Low_complexity 1 37 0 787 206 7 0 chr5 159180671 159180807 -40449343 - AluJ SINE Alu -31 281 145 642 186 0 9 chr5 159180805 159180918 -40449232 - AluJ SINE Alu -200 112 1 * 398 274 181 38 chr5 159180953 159181219 -40448931 + L2 LINE L2 3005 3308 -5 531 255 170 11 chr5 159181232 159181420 -40448730 - MIR SINE MIR -4 258 41 246 192 0 0 chr5 159181452 159181504 -40448646 + CT-rich Low_complexity Low_complexity 3 54 0 268 286 51 21 chr5 159181794 159182028 -40448122 - L1ME2 LINE L1 -212 5952 5712 1191 199 89 16 chr5 159182042 159182278 -40447872 - MER44D DNA MER2_type -1882 609 392 2604 83 11 16 chr5 159182278 159182650 -40447500 - L1PB1 LINE L1 0 6151 5782 1191 199 89 16 chr5 159182650 159182729 -40447421 - MER44D DNA MER2_type -2099 392 1 284 269 109 19 chr5 159182941 159183097 -40447053 - L1MEd LINE L1 -2621 3508 3339 751 216 97 5 chr5 159183162 159183347 -40446803 + LTR50 LTR ERVL 9 210 -585 504 256 173 16 chr5 159183526 159183780 -40446370 + LTR50 LTR ERVL 499 792 -3 252 261 80 40 chr5 159183783 159183959 -40446191 - L1MEd LINE L1 -3092 3037 2855 329 242 33 22 chr5 159184117 159184208 -40445942 - MLT1G LTR MaLR -4 545 454 456 254 119 26 chr5 159184404 159184644 -40445506 - MLT1G LTR MaLR -317 273 14 22 0 0 0 chr5 159184762 159184784 -40445366 + AT_rich Low_complexity Low_complexity 1 22 0 591 316 77 56 chr5 159184888 159185606 -40444544 - L1MEd LINE L1 -5058 1061 329 279 0 0 0 chr5 159185765 159185796 -40444354 + (TG)n Simple_repeat Simple_repeat 1 31 0 2485 76 3 13 chr5 159187187 159187501 -40442649 + AluSq SINE Alu 1 311 -2 823 229 40 5 chr5 159187970 159188171 -40441979 + MER3 DNA MER1_type 1 208 -1 300 309 58 14 chr5 159190339 159190478 -40439672 - MIR SINE MIR -28 234 90 222 118 0 0 chr5 159190627 159190661 -40439489 + (TG)n Simple_repeat Simple_repeat 2 35 0 216 0 0 0 chr5 159190660 159190684 -40439466 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 438 279 74 61 chr5 159190771 159191489 -40438661 + L1ME4a LINE L1 5278 6009 -112 24 32 0 0 chr5 159191588 159191619 -40438531 + AT_rich Low_complexity Low_complexity 1 31 0 424 263 80 7 chr5 159191990 159192127 -40438023 - L2 LINE L2 0 3313 3167 597 250 42 6 chr5 159192806 159192974 -40437176 - MER112 DNA MER1_type -1 259 86 222 37 0 0 chr5 159192981 159193008 -40437142 + (CGTG)n Simple_repeat Simple_repeat 1 27 0 307 309 34 20 chr5 159194122 159194271 -40435879 + MIR SINE MIR 112 262 0 7894 224 42 71 chr5 159194310 159195613 -40434537 - L1MA2 LINE L1 -5 7361 6021 2394 76 0 0 chr5 159195613 159195915 -40434235 + AluY SINE Alu 1 302 -9 7894 224 42 71 chr5 159195915 159197355 -40432795 - L1MA2 LINE L1 -1345 6021 4540 502 193 0 0 chr5 159197355 159197443 -40432707 + AluJ/FLAM SINE Alu 1 88 -224 7894 224 42 71 chr5 159197443 159197476 -40432674 - L1MA2 LINE L1 -2826 4540 4508 195 42 0 0 chr5 159197476 159197500 -40432650 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 7894 224 42 71 chr5 159197500 159197519 -40432631 - L1MA2 LINE L1 -2858 4508 4490 2365 85 3 0 chr5 159197519 159197825 -40432325 - AluY SINE Alu -4 307 1 7894 224 42 71 chr5 159197825 159201221 -40428929 - L1MA2 LINE L1 -2876 4490 1673 1379 339 34 27 chr5 159201506 159202215 -40427935 - L1MA2 LINE L1 -6453 756 43 238 150 17 17 chr5 159202286 159202346 -40427804 + (TA)n Simple_repeat Simple_repeat 1 60 0 2386 57 7 13 chr5 159203153 159203454 -40426696 + AluY SINE Alu 1 299 -12 342 0 0 0 chr5 159203454 159203492 -40426658 + (TA)n Simple_repeat Simple_repeat 2 39 0 971 293 80 30 chr5 159203668 159204143 -40426007 - LTR33 LTR ERVL -20 501 3 2994 222 33 51 chr5 159205791 159206816 -40423334 + L1ME1 LINE L1 5112 6117 -49 298 303 28 21 chr5 159206727 159206872 -40423278 + L1MA10 LINE L1 6186 6331 -3 * 573 263 96 15 chr5 159207358 159207556 -40422594 + MIR SINE MIR 46 259 -3 23160 26 7 0 chr5 159208230 159211755 -40418395 + L1PA2 LINE L1 2624 6155 0 7118 180 16 2 chr5 159211758 159213149 -40417001 - L1 LINE L1 -745 5401 3992 1654 233 43 96 chr5 159213429 159214014 -40416136 + MLT2B3 LTR ERVL 1 554 0 998 187 0 43 chr5 159214275 159214435 -40415715 - AluJo SINE Alu -25 287 135 216 0 0 0 chr5 159214435 159214459 -40415691 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 998 187 0 43 chr5 159214459 159214485 -40415665 - AluJo SINE Alu -177 135 109 511 328 94 35 chr5 159214743 159215148 -40415002 - L2 LINE L2 0 3313 2885 21 36 0 0 chr5 159215758 159215786 -40414364 + AT_rich Low_complexity Low_complexity 1 28 0 590 343 32 12 chr5 159216234 159216485 -40413665 - MIR SINE MIR -2 260 5 195 129 0 0 chr5 159217183 159217214 -40412936 + (A)n Simple_repeat Simple_repeat 1 31 0 21 36 0 0 chr5 159217630 159217658 -40412492 + AT_rich Low_complexity Low_complexity 1 28 0 424 270 26 33 chr5 159217913 159218065 -40412085 - MIR SINE MIR -64 198 48 267 329 101 32 chr5 159218482 159218640 -40411510 - MER5B DNA MER1_type 0 178 10 825 314 79 60 chr5 159218753 159219729 -40410421 + L2 LINE L2 2267 3305 -8 750 290 78 67 chr5 159220866 159221377 -40408773 - MLT1G LTR MaLR -2 588 72 24 0 0 0 chr5 159221624 159221648 -40408502 + AT_rich Low_complexity Low_complexity 1 24 0 672 13 0 0 chr5 159221798 159221875 -40408275 + (TATTG)n Simple_repeat Simple_repeat 2 78 0 1100 174 0 11 chr5 159221875 159222059 -40408091 - AluSg/x SINE Alu -26 286 105 310 291 185 16 chr5 159222413 159222602 -40407548 - MIR SINE MIR -11 251 31 766 237 20 73 chr5 159223916 159224161 -40405989 - MLT1K LTR MaLR -2 586 355 3631 134 16 13 chr5 159225108 159225726 -40404424 + L1MA3 LINE L1 5686 6305 0 2171 106 0 0 chr5 159225739 159226050 -40404100 + AluSx SINE Alu 1 311 0 235 179 179 13 chr5 159226330 159226408 -40403742 + L1ME4a LINE L1 5577 5667 -454 255 114 0 0 chr5 159226707 159226751 -40403399 + (TCCA)n Simple_repeat Simple_repeat 4 47 0 236 264 117 31 chr5 159226778 159226941 -40403209 + L1ME4a LINE L1 5938 6114 -7 183 80 0 0 chr5 159227477 159227502 -40402648 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 456 35 0 0 chr5 159227899 159227957 -40402193 + (TG)n Simple_repeat Simple_repeat 1 58 0 1858 147 0 34 chr5 159228867 159229194 -40400956 - AluSx SINE Alu 0 317 1 809 215 48 21 chr5 159229195 159229381 -40400769 - L1PA16 LINE L1 -12 6154 5964 223 244 31 87 chr5 159230324 159230451 -40399699 + MIR SINE MIR 97 216 -46 306 369 68 28 chr5 159230499 159230675 -40399475 + MLT1K LTR MaLR 58 240 -348 294 146 62 0 chr5 159231570 159231666 -40398484 + (TA)n Simple_repeat Simple_repeat 2 103 0 329 287 125 7 chr5 159232056 159232192 -40397958 + MIR SINE MIR 81 232 -30 510 371 47 24 chr5 159232908 159233161 -40396989 - MIR SINE MIR 0 262 4 212 225 50 125 chr5 159233381 159233501 -40396649 - L2 LINE L2 -32 3281 3171 834 221 28 0 chr5 159233564 159233745 -40396405 + MER5A DNA MER1_type 3 188 -1 269 343 86 47 chr5 159233790 159234023 -40396127 - L2 LINE L2 -345 2969 2728 2108 134 3 0 chr5 159234439 159234738 -40395412 - AluSg SINE Alu -10 300 1 301 284 65 52 chr5 159234766 159234921 -40395229 + LTR16C LTR ERVL 331 487 -4 397 259 47 47 chr5 159234956 159235126 -40395024 - L2 LINE L2 -32 3281 3112 230 297 14 0 chr5 159235212 159235286 -40394864 - L2 LINE L2 -1053 2261 2187 496 222 20 0 chr5 159236283 159236382 -40393768 - MER63 DNA MER1_type -275 786 686 391 185 12 12 chr5 159236444 159236525 -40393625 - MER5A DNA MER1_type -99 90 10 534 174 76 28 chr5 159236672 159236816 -40393334 + MIR SINE MIR 101 251 -11 219 119 48 0 chr5 159238171 159238213 -40391937 + A-rich Low_complexity Low_complexity 1 44 0 189 107 0 0 chr5 159238781 159238809 -40391341 + (T)n Simple_repeat Simple_repeat 1 28 0 2224 70 0 48 chr5 159239599 159239913 -40390237 + AluY SINE Alu 1 299 -12 226 309 86 0 chr5 159240106 159240187 -40389963 + L1ME4a LINE L1 5990 6077 -44 1906 160 0 3 chr5 159240375 159240668 -40389482 + AluSx SINE Alu 4 295 -17 247 269 145 7 chr5 159240725 159240870 -40389280 + MER103 DNA DNA 2 166 0 259 197 16 0 chr5 159240952 159241013 -40389137 + (TA)n Simple_repeat Simple_repeat 2 63 0 427 171 14 2 chr5 159241015 159241110 -40389040 - L1MA8 LINE L1 -83 6106 6015 21 82 0 0 chr5 159241183 159241232 -40388918 + AT_rich Low_complexity Low_complexity 1 49 0 182 280 120 13 chr5 159241250 159241325 -40388825 - L2 LINE L2 -74 3198 3116 315 197 52 0 chr5 159241527 159241943 -40388207 + (TA)n Simple_repeat Simple_repeat 1 437 0 437 181 0 151 chr5 159242280 159242446 -40387704 + MER102b DNA MER1_type 201 341 0 465 231 134 0 chr5 159243622 159243756 -40386394 + MIR SINE MIR 8 159 -103 2064 148 20 12 chr5 159244178 159244522 -40385628 + MER7A DNA MER2_type 1 345 -1 414 238 49 63 chr5 159244523 159244666 -40385484 + MIR SINE MIR 116 256 -6 221 57 29 0 chr5 159245160 159245195 -40384955 + (CCCCCT)n Simple_repeat Simple_repeat 4 39 0 3596 38 0 11 chr5 159245577 159246021 -40384129 + L1PA3 LINE L1 5706 6144 -11 1872 157 32 0 chr5 159246034 159246378 -40383772 + L1MA2 LINE L1 5950 6304 0 806 159 0 0 chr5 159246381 159246538 -40383612 + L1PA15 LINE L1 5175 5331 -815 1438 133 0 58 chr5 159246538 159246778 -40383372 + AluSx SINE Alu 1 226 -86 2470 110 32 34 chr5 159246778 159247104 -40383046 + L1PA15 LINE L1 5451 5776 -389 2172 94 3 0 chr5 159247104 159247391 -40382759 + AluSq SINE Alu 1 288 -25 195 42 0 0 chr5 159247391 159247415 -40382735 + (CAATA)n Simple_repeat Simple_repeat 2 25 0 2470 110 32 34 chr5 159247415 159247497 -40382653 + L1PA15 LINE L1 5774 5859 -306 2421 136 10 10 chr5 159297499 159297911 -40332239 + THE1C-int LTR MaLR 1169 1580 0 2355 144 3 3 chr5 159297911 159298286 -40331864 + THE1C LTR MaLR 1 375 0 574 313 49 9 chr5 159298320 159298544 -40331606 + MIR SINE MIR 29 261 -1 866 268 31 56 chr5 159299278 159299670 -40330480 + L1MCc LINE L1 1128 1509 -4914 260 229 0 16 chr5 159299834 159299895 -40330255 + AluJ/FLAM SINE Alu 14 73 -229 1055 79 0 0 chr5 159300324 159300464 -40329686 + L1PA3 LINE L1 6013 6152 -3 509 295 51 51 chr5 159300656 159300971 -40329179 - MLT1K LTR MaLR 0 588 274 2020 138 0 14 chr5 159301371 159301668 -40328482 - AluSc SINE Alu -16 293 1 36 40 0 0 chr5 159301791 159301841 -40328309 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 159302072 159302093 -40328057 + AT_rich Low_complexity Low_complexity 1 21 0 1260 166 20 76 chr5 159302662 159302963 -40327187 - MER57A LTR ERV1 -117 286 3 4838 63 0 9 chr5 159303117 159303755 -40326395 + L1PA4 LINE L1 5522 6153 -2 289 137 0 0 chr5 159304051 159304102 -40326048 - MADE1 DNA Mariner 0 80 30 1717 260 107 20 chr5 159304512 159305058 -40325092 + MLT1E LTR MaLR 2 593 0 250 328 27 59 chr5 159305062 159305248 -40324902 - L2 LINE L2 -864 2450 2271 642 309 28 18 chr5 159306137 159306354 -40323796 - MIR SINE MIR -21 241 23 234 284 118 47 chr5 159306693 159306820 -40323330 + MIR SINE MIR 110 245 -17 225 260 0 0 chr5 159306870 159306947 -40323203 + (TA)n Simple_repeat Simple_repeat 1 77 0 342 331 29 23 chr5 159306989 159307164 -40322986 - MIR SINE MIR -74 188 13 194 277 8 104 chr5 159309119 159309252 -40320898 - MER5A DNA MER1_type -1 177 71 2273 120 25 3 chr5 159309252 159309610 -40320540 - L1PA16 LINE L1 -1 6165 5800 194 277 8 104 chr5 159309610 159309674 -40320476 - MER5A DNA MER1_type -107 71 2 1540 189 29 16 chr5 159310518 159310824 -40319326 - AluJb SINE Alu -2 310 1 2282 114 0 22 chr5 159313075 159313391 -40316759 + AluSg SINE Alu 1 309 -1 1175 226 97 6 chr5 159313456 159313921 -40316229 - MLT1F LTR MaLR -46 496 1 721 112 35 0 chr5 159314043 159314159 -40315991 - L1PB1 LINE L1 -1 6150 6031 690 306 28 14 chr5 159315004 159315220 -40314930 - MIR SINE MIR -21 241 23 228 241 139 58 chr5 159315549 159315686 -40314464 + MIR SINE MIR 98 245 -17 309 208 0 0 chr5 159315736 159315813 -40314337 + (TA)n Simple_repeat Simple_repeat 1 77 0 331 356 23 17 chr5 159315854 159316031 -40314119 - MIR SINE MIR -73 189 12 544 299 107 21 chr5 159317024 159317258 -40312892 - MIR SINE MIR -2 260 7 3797 138 47 18 chr5 159319063 159319742 -40310408 + LTR34 LTR ERV1 1 699 0 572 268 39 74 chr5 159319754 159320064 -40310086 + MLT1I LTR MaLR 85 383 -26 332 344 18 18 chr5 159320188 159320351 -40309799 + MER117 DNA MER1_type 15 177 -20 225 250 240 10 chr5 159320976 159321080 -40309070 - MIR SINE MIR -6 256 129 371 39 39 0 chr5 159321735 159321787 -40308363 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 210 292 300 0 chr5 159322101 159322231 -40307919 - L2 LINE L2 -25 3247 3079 300 293 144 14 chr5 159323100 159323315 -40306835 - L1ME4a LINE L1 0 6121 5879 465 294 63 14 chr5 159323359 159323580 -40306570 - L1ME4a LINE L1 -299 5822 5591 737 298 23 23 chr5 159323749 159324007 -40306143 + MIR SINE MIR 2 259 -3 267 245 110 50 chr5 159324181 159324372 -40305778 + MLT1J2 LTR MaLR 248 444 -2 265 331 125 29 chr5 159325265 159325401 -40304749 - MIR SINE MIR -80 182 34 331 296 16 0 chr5 159326141 159326266 -40303884 - LTR33 LTR ERVL -2 519 393 204 97 0 0 chr5 159326445 159326476 -40303674 + (CAT)n Simple_repeat Simple_repeat 3 33 0 326 147 0 29 chr5 159326519 159326587 -40303563 - L1MC1 LINE L1 -414 5919 5854 1883 148 0 21 chr5 159326794 159327115 -40303035 - AluSx SINE Alu 0 315 1 275 382 18 18 chr5 159327164 159327274 -40302876 + L2 LINE L2 3137 3246 -26 21 0 0 0 chr5 159327790 159327811 -40302339 + AT_rich Low_complexity Low_complexity 1 21 0 264 59 0 0 chr5 159328264 159328298 -40301852 + (GA)n Simple_repeat Simple_repeat 2 35 0 314 229 12 36 chr5 159328619 159328702 -40301448 + MIR SINE MIR 70 150 -112 189 74 0 0 chr5 159328759 159328786 -40301364 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 260 325 26 13 chr5 159329187 159329264 -40300886 - L2 LINE L2 -52 3220 3143 249 33 0 0 chr5 159329398 159329428 -40300722 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 3132 160 25 73 chr5 159329570 159330295 -40299855 + LTR8 LTR ERV1 2 691 0 21 0 0 0 chr5 159330948 159330969 -40299181 + AT_rich Low_complexity Low_complexity 1 21 0 36 40 0 0 chr5 159331200 159331250 -40298900 + AT_rich Low_complexity Low_complexity 1 50 0 2145 118 0 14 chr5 159331373 159331670 -40298480 + AluSc SINE Alu 1 293 -16 423 38 0 0 chr5 159332773 159332826 -40297324 + (TC)n Simple_repeat Simple_repeat 1 53 0 656 272 71 0 chr5 159334952 159335121 -40295029 + MER5A DNA MER1_type 9 189 0 208 263 0 0 chr5 159335130 159335168 -40294982 + MER5A DNA MER1_type 55 92 -97 683 259 60 15 chr5 159335227 159335428 -40294722 + MIR SINE MIR 46 255 -7 859 183 91 0 chr5 159335559 159335734 -40294416 + L1MB3 LINE L1 5990 6180 -3 239 158 0 0 chr5 159335755 159335812 -40294338 + L1MB3 LINE L1 6127 6183 0 186 71 0 0 chr5 159336689 159336717 -40293433 + (A)n Simple_repeat Simple_repeat 1 28 0 302 343 56 28 chr5 159336718 159336861 -40293289 + MIR SINE MIR 39 185 -77 213 39 0 0 chr5 159336861 159336887 -40293263 + (CA)n Simple_repeat Simple_repeat 1 26 0 353 255 59 39 chr5 159336892 159336994 -40293156 + MER82 DNA MER2_type 458 561 -92 1113 279 63 72 chr5 159337638 159338351 -40291799 + L1MCc LINE L1 964 1867 -5114 1499 208 3 27 chr5 159338351 159338645 -40291505 + AluJo SINE Alu 1 287 -25 1113 279 63 72 chr5 159338645 159338844 -40291306 + L1MCc LINE L1 1867 2066 -4915 1047 229 90 13 chr5 159338845 159339146 -40291004 - MLT1D LTR MaLR -3 502 179 22 0 0 0 chr5 159339165 159339187 -40290963 + AT_rich Low_complexity Low_complexity 1 22 0 748 139 5 123 chr5 159339281 159339468 -40290682 - MLT1D LTR MaLR -460 166 2 1011 288 68 41 chr5 159339480 159340663 -40289487 + L1MCc LINE L1 2071 3221 -3720 2435 153 36 14 chr5 159340663 159341082 -40289068 + MSTA LTR MaLR 1 428 0 9192 166 23 16 chr5 159341082 159342722 -40287428 + MSTA-int LTR MaLR 1 1651 0 2515 137 31 21 chr5 159342722 159343146 -40287004 + MSTA LTR MaLR 1 428 0 1011 288 68 41 chr5 159343146 159343396 -40286754 + L1MCc LINE L1 3220 3506 -3435 653 119 0 0 chr5 159343434 159343535 -40286615 - L1MA2 LINE L1 -1 6303 6203 1333 112 5 0 chr5 159343540 159343737 -40286413 + L1PB1 LINE L1 3 200 -6663 9775 186 101 40 chr5 159343739 159344783 -40285367 + L1PB1 LINE L1 636 1615 -5247 180 0 0 0 chr5 159344783 159344803 -40285347 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 9775 186 101 40 chr5 159344803 159346758 -40283392 + L1PB1 LINE L1 1615 3449 -3413 882 170 14 0 chr5 159346758 159346899 -40283251 - AluSg/x SINE Alu -18 292 150 9775 186 101 40 chr5 159346899 159347551 -40282599 + L1PB1 LINE L1 3449 4060 -2802 2132 129 16 0 chr5 159347551 159347854 -40282296 + AluSq SINE Alu 1 308 -5 9775 186 101 40 chr5 159347854 159348074 -40282076 + L1PB1 LINE L1 4060 4265 -2597 234 0 0 0 chr5 159348074 159348100 -40282050 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 9775 186 101 40 chr5 159348100 159348999 -40281151 + L1PB1 LINE L1 4265 6033 -829 4674 94 23 0 chr5 159349201 159349884 -40280266 + L1PB1 LINE L1 6009 6707 -160 2983 89 0 5 chr5 159349884 159350276 -40279874 - MLT2A1 LTR ERVL -54 390 1 3711 156 34 5 chr5 159350276 159351306 -40278844 - L1MA3 LINE L1 -410 6537 5489 953 197 16 26 chr5 159351306 159351499 -40278651 - L1MA3 LINE L1 -6596 193 3 2655 251 72 6 chr5 159351521 159352558 -40277592 + L1M4 LINE L1 4104 5209 -937 367 228 57 8 chr5 159352596 159352719 -40277431 + L1ME2 LINE L1 4419 4547 -1599 339 164 0 0 chr5 159352719 159352780 -40277370 + (TA)n Simple_repeat Simple_repeat 2 62 0 2036 229 67 18 chr5 159352798 159353414 -40276736 + L1ME2 LINE L1 5330 5975 -189 26 0 0 0 chr5 159353482 159353508 -40276642 + AT_rich Low_complexity Low_complexity 1 26 0 2031 129 40 30 chr5 159353702 159354073 -40276077 - THE1C LTR MaLR 0 375 1 1435 194 82 0 chr5 159354105 159354373 -40275777 - AluJo SINE Alu -22 290 1 361 302 39 8 chr5 159355382 159355511 -40274639 + MIR SINE MIR 12 144 -118 263 310 53 102 chr5 159355755 159356058 -40274092 - L2 LINE L2 -376 2938 2651 342 345 44 32 chr5 159356629 159356878 -40273272 - L2 LINE L2 -196 3076 2825 2218 129 43 0 chr5 159357671 159358042 -40272108 - MLT1B LTR MaLR -3 387 1 326 212 141 0 chr5 159358046 159358131 -40272019 - L2 LINE L2 -13 3300 3204 614 260 48 72 chr5 159358619 159358869 -40271281 + MIR SINE MIR 7 250 -12 240 86 0 0 chr5 159359674 159359709 -40270441 + L2 LINE L2 3279 3313 0 303 394 52 0 chr5 159359715 159359870 -40270280 - MIR SINE MIR -76 186 24 223 303 30 0 chr5 159360019 159360085 -40270065 + L2 LINE L2 3185 3252 -20 1159 247 99 12 chr5 159360459 159360847 -40269303 + LTR16A LTR ERVL 26 446 -4 342 306 44 61 chr5 159360856 159361085 -40269065 + L2 LINE L2 2228 2452 -862 1970 244 106 20 chr5 159361087 159361632 -40268518 - MLT1E LTR MaLR 0 593 2 330 118 0 0 chr5 159362041 159362092 -40268058 + MADE1 DNA Mariner 30 80 0 479 323 60 0 chr5 159362262 159362429 -40267721 + MIR SINE MIR 57 233 -29 1117 57 0 0 chr5 159363382 159363522 -40266628 + L1PA3 LINE L1 6013 6152 -3 783 283 87 59 chr5 159363714 159364220 -40265930 - MLT1K LTR MaLR 0 588 69 340 345 107 0 chr5 159364726 159364894 -40265256 + MIR SINE MIR 76 261 -1 201 357 12 0 chr5 159364940 159365024 -40265126 + MIR SINE MIR 175 259 -3 2099 129 3 0 chr5 159365372 159365674 -40264476 - AluSx SINE Alu -5 307 5 688 301 70 9 chr5 159366843 159367072 -40263078 + MIR SINE MIR 13 255 -7 246 336 84 9 chr5 159367465 159367572 -40262578 - MIR SINE MIR -78 130 16 26 0 0 0 chr5 159367765 159367791 -40262359 + AT_rich Low_complexity Low_complexity 1 26 0 492 275 192 6 chr5 159367791 159367973 -40262177 - MIR SINE MIR 0 262 47 234 62 0 0 chr5 159368491 159368523 -40261627 + (CAA)n Simple_repeat Simple_repeat 2 33 0 828 247 46 39 chr5 159368923 159369182 -40260968 - MIR SINE MIR -1 261 1 543 308 66 15 chr5 159369209 159369407 -40260743 - MIR SINE MIR -14 248 41 2140 107 43 3 chr5 159369569 159369869 -40260281 - AluSx SINE Alu 0 312 1 7187 205 62 24 chr5 159369932 159369961 -40260189 - L1MC3 LINE L1 0 7785 7759 1600 168 151 84 chr5 159369961 159370472 -40259678 - MER44D DNA MER2_type -1 604 5 7187 205 62 24 chr5 159370472 159372833 -40257317 - L1MC3 LINE L1 -26 7759 5279 6459 50 0 0 chr5 159372833 159373621 -40256529 + L1PA5 LINE L1 5366 6153 -1 7187 205 62 24 chr5 159373621 159373766 -40256384 - L1MC3 LINE L1 -2506 5279 5141 1293 222 102 45 chr5 159373777 159373916 -40256234 + MLT1C LTR MaLR 44 174 -293 2302 102 3 0 chr5 159373916 159374220 -40255930 + AluSc SINE Alu 1 305 -4 1293 222 102 45 chr5 159374220 159374481 -40255669 + MLT1C LTR MaLR 174 467 0 1086 247 10 16 chr5 159374503 159374807 -40255343 - L1MC3 LINE L1 -1015 5131 4830 184 333 0 0 chr5 159375352 159375418 -40254732 + L2 LINE L2 3205 3270 -2 1449 197 0 46 chr5 159375585 159375869 -40254281 - AluJo SINE Alu -31 281 11 488 250 65 100 chr5 159375901 159376101 -40254049 + MER102b DNA MER1_type 146 338 -3 209 300 184 26 chr5 159376225 159376415 -40253735 - MIR SINE MIR -32 230 11 714 326 102 3 chr5 159376670 159377013 -40253137 + LTR16A LTR ERVL 61 437 -13 21 0 0 0 chr5 159377090 159377111 -40253039 + AT_rich Low_complexity Low_complexity 1 21 0 363 315 13 27 chr5 159378463 159378612 -40251538 - MIR3 SINE MIR 0 208 62 349 203 0 0 chr5 159378957 159379021 -40251129 + MSTD LTR MaLR 1 64 -364 7717 23 0 0 chr5 159379052 159380185 -40249965 - L1PA3 LINE L1 -3 6152 5020 9966 20 0 1 chr5 159380185 159381350 -40248800 + L1PA3 LINE L1 3849 5012 -1134 881 180 94 76 chr5 159381350 159381650 -40248500 + MSTD LTR MaLR 57 396 0 23 54 0 0 chr5 159381876 159381913 -40248237 + AT_rich Low_complexity Low_complexity 1 37 0 2172 228 72 115 chr5 159381916 159382494 -40247656 - L1MC5 LINE L1 -72 7889 7287 348 24 0 0 chr5 159382494 159382535 -40247615 + (TG)n Simple_repeat Simple_repeat 2 42 0 2172 228 72 115 chr5 159382535 159383333 -40246817 - L1MC5 LINE L1 -674 7287 6559 22 35 0 0 chr5 159383547 159383576 -40246574 + AT_rich Low_complexity Low_complexity 1 29 0 2000 229 75 54 chr5 159383936 159385007 -40245143 - L1ME LINE L1 -593 5571 4478 1686 127 92 7 chr5 159385014 159385297 -40244853 - AluSx SINE Alu -5 307 1 22 35 0 0 chr5 159385509 159385538 -40244612 + AT_rich Low_complexity Low_complexity 1 29 0 427 289 140 6 chr5 159385869 159386048 -40244102 + MIR SINE MIR 19 220 -42 449 237 26 111 chr5 159387030 159387220 -40242930 - MIR SINE MIR -11 251 78 455 326 31 10 chr5 159387306 159387502 -40242648 - MIR SINE MIR -32 230 31 1041 292 12 18 chr5 159387905 159388247 -40241903 + HAL1 LINE L1 15 354 -2153 341 292 26 9 chr5 159388248 159388361 -40241789 + HAL1 LINE L1 391 505 -2002 2139 222 77 87 chr5 159388507 159388563 -40241587 + Zaphod DNA AcHobo 20 75 -3956 198 71 0 0 chr5 159388563 159388591 -40241559 + (CA)n Simple_repeat Simple_repeat 2 29 0 2139 222 77 87 chr5 159388591 159389510 -40240640 + Zaphod DNA AcHobo 75 985 -3046 1049 229 57 19 chr5 159389512 159389878 -40240272 + Zaphod DNA AcHobo 3594 3973 -58 477 317 154 4 chr5 159392479 159392706 -40237444 - MIR SINE MIR 0 262 2 509 279 84 11 chr5 159392890 159393069 -40237081 + MIR SINE MIR 70 261 -1 302 278 51 5 chr5 159393937 159394073 -40236077 - MLT1I LTR MaLR -33 376 244 431 238 38 9 chr5 159394224 159394329 -40235821 + MER45A DNA AcHobo 70 177 -1 3772 136 19 42 chr5 159394765 159394928 -40235222 - L1MA7 LINE L1 0 6291 6126 1731 179 10 26 chr5 159394928 159395230 -40234920 + AluJb SINE Alu 3 299 -13 3772 136 19 42 chr5 159395230 159395786 -40234364 - L1MA7 LINE L1 -165 6126 5588 720 153 19 13 chr5 159395788 159395945 -40234205 + L1 LINE L1 4540 4697 -1449 254 267 17 17 chr5 159395946 159396006 -40234144 - MER5A DNA MER1_type -118 71 12 202 220 174 92 chr5 159396986 159397095 -40233055 - MIR SINE MIR -61 147 30 24 96 0 0 chr5 159397415 159397488 -40232662 + AT_rich Low_complexity Low_complexity 1 73 0 2461 59 3 7 chr5 159397923 159398229 -40231921 - AluSc SINE Alu -4 305 1 414 0 0 0 chr5 159398407 159398453 -40231697 + (TG)n Simple_repeat Simple_repeat 2 47 0 636 109 80 22 chr5 159398647 159398784 -40231366 + L1MA9 LINE L1 6162 6306 -6 1910 201 84 34 chr5 159398791 159399289 -40230861 - MER63C DNA MER1_type -155 775 253 793 273 77 66 chr5 159400313 159400705 -40229445 + LTR33A LTR ERVL 2 397 -126 184 379 0 0 chr5 159400818 159400876 -40229274 - L2 LINE L2 -11 3261 3204 224 229 21 0 chr5 159400882 159400930 -40229220 - MIR SINE MIR -99 163 115 2577 166 126 34 chr5 159401402 159402130 -40228020 - LTR1B LTR ERV1 -2 783 1 1961 122 0 34 chr5 159402250 159402586 -40227564 + AluSx SINE Alu 1 326 0 1915 18 0 14 chr5 159403129 159403349 -40226801 - AluYa5 SINE Alu -14 297 81 472 352 73 0 chr5 159403748 159403981 -40226169 - MIR SINE MIR -2 260 11 257 314 83 8 chr5 159405475 159405596 -40224554 - L2 LINE L2 -13 3300 3171 1071 68 0 3 chr5 159405622 159405874 -40224276 + AluSc SINE Alu 1 317 0 484 329 57 36 chr5 159406011 159406312 -40223838 - L2 LINE L2 -338 2976 2670 4206 128 9 3 chr5 159406328 159406968 -40223182 - L1PA15 LINE L1 -14 6151 5508 532 240 20 20 chr5 159407531 159407681 -40222469 - MIR SINE MIR -15 247 98 220 378 35 28 chr5 159408412 159408555 -40221595 - MIR SINE MIR -81 181 38 1117 237 159 88 chr5 159408860 159408878 -40221272 + L1M4 LINE L1 4528 4543 -1603 1682 186 14 3 chr5 159408878 159409163 -40220987 - AluJo SINE Alu -24 288 1 1117 237 159 88 chr5 159409163 159409803 -40220347 + L1M4 LINE L1 4543 5233 -913 423 214 0 11 chr5 159409846 159409935 -40220215 + Ricksha DNA DNA 16 103 -1151 1674 251 60 17 chr5 159409942 159410638 -40219512 - L1M1 LINE L1 -3465 4100 3386 30622 120 12 57 chr5 159410644 159417085 -40213065 - L1PA7 LINE L1 -8 6146 12 2066 270 53 68 chr5 159417104 159418360 -40211790 - L1M4c LINE L1 -4174 3392 2153 644 217 34 14 chr5 159418406 159418613 -40211537 + L1 LINE L1 2839 3049 -3097 5127 24 0 0 chr5 159418622 159419498 -40210652 - L1PA3 LINE L1 -494 5661 4786 4027 32 0 0 chr5 159419498 159419986 -40210164 + L1PA3 LINE L1 5668 6159 0 685 199 34 0 chr5 159419987 159420193 -40209957 + L1 LINE L1 3052 3264 -2882 1899 183 40 45 chr5 159420199 159420543 -40209607 - MER21B LTR ERV1 -90 828 484 315 0 0 0 chr5 159420543 159420578 -40209572 + (TA)n Simple_repeat Simple_repeat 2 36 0 279 79 0 0 chr5 159420580 159420618 -40209532 + (CA)n Simple_repeat Simple_repeat 1 38 0 1899 183 40 45 chr5 159420618 159420752 -40209398 - MER21B LTR ERV1 -435 483 399 337 210 12 0 chr5 159420757 159420838 -40209312 + L1MA9 LINE L1 6227 6308 -4 223 299 56 56 chr5 159421590 159421697 -40208453 - MIR SINE MIR -147 115 9 10221 208 31 98 chr5 159421976 159423330 -40206820 + L1M2 LINE L1 2 1445 -5403 1758 158 21 0 chr5 159423330 159423609 -40206541 + AluJb SINE Alu 1 285 -27 321 26 0 0 chr5 159423609 159423647 -40206503 + (TA)n Simple_repeat Simple_repeat 2 39 0 10221 208 31 98 chr5 159423647 159424261 -40205889 + L1M2 LINE L1 1444 2097 -4751 923 126 7 0 chr5 159424261 159424396 -40205754 + AluSg/x SINE Alu 158 293 -19 10221 208 31 98 chr5 159424396 159425431 -40204719 + L1M2 LINE L1 2097 2930 -3918 680 210 0 17 chr5 159425421 159425597 -40204553 - L1M2 LINE L1 -5028 1821 1649 * 6847 209 20 11 chr5 159425606 159427256 -40202894 + L1M2 LINE L1 2935 4598 -2250 413 288 121 47 chr5 159427288 159427775 -40202375 - L1MC/D LINE L1 -2024 5784 5262 481 323 32 11 chr5 159428862 159429048 -40201102 + MIR3 SINE MIR 8 197 -11 231 88 0 0 chr5 159430581 159430615 -40199535 + L1MC2 LINE L1 6042 6075 -269 * 514 182 16 8 chr5 159430613 159430734 -40199416 + L1MC3 LINE L1 7664 7785 0 208 320 84 78 chr5 159431120 159431404 -40198746 + L2 LINE L2 2346 2631 -683 4205 159 24 10 chr5 159431438 159432230 -40197920 + Ricksha DNA DNA 2441 3243 -8 199 219 0 0 chr5 159432755 159432796 -40197354 - L2 LINE L2 -4 3309 3269 311 328 160 0 chr5 159432876 159432995 -40197155 + MIR SINE MIR 12 149 -113 701 277 49 9 chr5 159433799 159434023 -40196127 - MIR SINE MIR -1 261 29 2607 120 3 0 chr5 159434057 159434431 -40195719 - THE1C LTR MaLR 0 375 1 9703 140 28 9 chr5 159434431 159435981 -40194169 - THE1C-int LTR MaLR 0 1580 1 2539 114 3 34 chr5 159435981 159436026 -40194124 - THE1C LTR MaLR 0 375 330 1741 148 21 39 chr5 159436026 159436338 -40193812 + AluSx SINE Alu 5 311 0 2539 114 3 34 chr5 159436338 159436678 -40193472 - THE1C LTR MaLR -45 330 1 457 324 95 22 chr5 159438516 159438760 -40191390 + MIR SINE MIR 4 262 0 35 63 0 0 chr5 159439161 159439224 -40190926 + AT_rich Low_complexity Low_complexity 1 63 0 4338 221 19 10 chr5 159439224 159440849 -40189301 - L1PA13 LINE L1 -3605 3192 1532 202 167 21 42 chr5 159441555 159441603 -40188547 + L3 LINE CR1 633 679 -898 382 339 41 98 chr5 159444577 159445017 -40185133 + L2 LINE L2 2857 3271 -1 278 291 139 35 chr5 159445260 159445432 -40184718 + L2 LINE L2 3124 3313 0 474 262 35 50 chr5 159447300 159447441 -40182709 + L2 LINE L2 3175 3313 0 1785 137 6 57 chr5 159447906 159448272 -40181878 + L1MA7 LINE L1 5945 6291 0 557 274 58 34 chr5 159449914 159450122 -40180028 + L2 LINE L2 2921 3133 -180 3963 180 47 2 chr5 159450129 159450929 -40179221 - L1MC1 LINE L1 0 6333 5469 446 294 12 44 chr5 159450937 159451097 -40179053 + L2 LINE L2 3156 3310 -3 2171 130 0 20 chr5 159451647 159452001 -40178149 - L1PA13 LINE L1 0 6163 5817 11305 122 29 6 chr5 159452010 159455705 -40174445 - L1PA8A LINE L1 -17 6429 2446 489 151 54 0 chr5 159455723 159455889 -40174261 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 402 53 79 53 chr5 159455896 159456130 -40174020 + (TA)n Simple_repeat Simple_repeat 1 240 0 395 158 61 0 chr5 159456138 159456303 -40173847 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 525 147 49 8 chr5 159456323 159456818 -40173332 + (TATAA)n Simple_repeat Simple_repeat 1 515 0 5551 196 10 27 chr5 159456820 159458775 -40171375 - L1PA8A LINE L1 -3991 2470 490 * 12721 210 64 15 chr5 159458773 159463288 -40166862 - L1PA13 LINE L1 -2026 4771 1 336 359 36 36 chr5 159464083 159464226 -40165924 + L1ME2 LINE L1 244 389 -5681 500 111 0 12 chr5 159464226 159464307 -40165843 + MADE1 DNA Mariner 1 80 0 336 359 36 36 chr5 159464307 159464386 -40165764 + L1ME2 LINE L1 388 466 -5604 534 288 56 33 chr5 159464616 159465266 -40164884 + L1ME2 LINE L1 525 1233 -4985 497 274 95 21 chr5 159465269 159465554 -40164596 + L1ME2 LINE L1 1272 1577 -4684 527 122 0 0 chr5 159465555 159465629 -40164521 - L1PA15-16 LINE L1 -4160 2689 2616 523 133 0 11 chr5 159465629 159465719 -40164431 + L1PA16 LINE L1 6069 6157 -9 785 208 60 35 chr5 159465728 159466012 -40164138 + L1M4 LINE L1 4386 4676 -1470 227 279 15 0 chr5 159466023 159466091 -40164059 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 309 169 0 0 chr5 159466093 159466152 -40163998 + (CATA)n Simple_repeat Simple_repeat 1 59 0 265 210 0 16 chr5 159466177 159466239 -40163911 - MER4-int LTR ERV1 -5436 1162 1102 966 254 12 44 chr5 159466314 159466652 -40163498 + L1M4 LINE L1 4787 5113 -1033 258 105 0 0 chr5 159466662 159466700 -40163450 + (CA)n Simple_repeat Simple_repeat 1 38 0 301 206 29 15 chr5 159466710 159466778 -40163372 + L1ME2 LINE L1 1650 1718 -4362 1889 248 77 20 chr5 159466789 159467419 -40162731 + L1ME2 LINE L1 5197 5912 -186 2267 166 29 2 chr5 159467419 159467835 -40162315 - MSTA LTR MaLR -1 427 1 1889 248 77 20 chr5 159467835 159468024 -40162126 + L1ME2 LINE L1 5912 6089 -9 24 53 0 0 chr5 159468029 159468067 -40162083 + AT_rich Low_complexity Low_complexity 1 38 0 243 281 0 0 chr5 159468072 159468136 -40162014 + MER103 DNA DNA 24 87 -79 2069 158 24 24 chr5 159468744 159468853 -40161297 + THE1C LTR MaLR 3 111 -264 2563 113 3 18 chr5 159468853 159469234 -40160916 - THE1C LTR MaLR 0 375 1 2069 158 24 24 chr5 159469234 159469497 -40160653 + THE1C LTR MaLR 110 375 0 217 330 27 27 chr5 159470202 159470314 -40159836 - MIR SINE MIR -58 150 39 1862 164 20 0 chr5 159470496 159470800 -40159350 + AluJb SINE Alu 1 310 -2 877 327 51 45 chr5 159471394 159471920 -40158230 + L2 LINE L2 2770 3309 -4 517 307 135 53 chr5 159472799 159473118 -40157032 - L2 LINE L2 0 3272 2928 2354 130 36 0 chr5 159473118 159473480 -40156670 - THE1C LTR MaLR 0 375 1 8928 126 76 30 chr5 159473480 159474991 -40155159 - THE1C-int LTR MaLR 0 1580 1 2481 125 16 0 chr5 159474991 159475360 -40154790 - THE1C LTR MaLR 0 375 1 319 179 13 13 chr5 159475519 159475597 -40154553 + GA-rich Low_complexity Low_complexity 4 81 0 1925 168 14 58 chr5 159476237 159476654 -40153496 - MER57A LTR ERV1 -2 401 3 5234 36 2 3 chr5 159476808 159477440 -40152710 + L1PA4 LINE L1 5522 6152 -3 216 312 0 13 chr5 159477524 159477601 -40152549 - MIR SINE MIR -59 203 128 260 328 75 59 chr5 159477601 159477787 -40152363 + MIR SINE MIR 2 190 -18 392 291 110 0 chr5 159477911 159478038 -40152112 - MIR SINE MIR -2 260 120 209 261 333 7 chr5 159478623 159478761 -40151389 + MIR3 SINE MIR 17 199 -9 510 225 56 28 chr5 159479303 159479445 -40150705 + MER58C DNA MER1_type 70 215 0 801 355 83 19 chr5 159481442 159481921 -40148229 - L2 LINE L2 0 3313 2804 23 0 0 0 chr5 159482184 159482207 -40147943 + AT_rich Low_complexity Low_complexity 1 23 0 1872 153 51 26 chr5 159482519 159482871 -40147279 - THE1B LTR MaLR -3 361 1 352 24 0 0 chr5 159484132 159484174 -40145976 + L1MB1 LINE L1 6126 6167 -1 232 278 103 10 chr5 159484278 159484375 -40145775 - MIR SINE MIR 0 262 157 476 300 29 43 chr5 159485385 159485595 -40144555 + MIR SINE MIR 31 237 -25 855 159 0 29 chr5 159486105 159486243 -40143907 + AluJo SINE Alu 2 135 -177 571 314 33 9 chr5 159486471 159486681 -40143469 - MIR SINE MIR -22 240 26 430 318 110 12 chr5 159487273 159487446 -40142704 - L2 LINE L2 0 3272 3083 345 247 47 12 chr5 159487468 159487553 -40142597 + MIR SINE MIR 104 191 -71 22 0 0 0 chr5 159487898 159487920 -40142230 + AT_rich Low_complexity Low_complexity 1 22 0 251 176 29 0 chr5 159488012 159488080 -40142070 - MER67C LTR ERV1 -6 704 635 473 189 11 0 chr5 159488110 159488200 -40141950 - MER67C LTR ERV1 -238 472 382 625 133 0 0 chr5 159488201 159488299 -40141851 - MSTA LTR MaLR 0 426 329 537 96 117 0 chr5 159488301 159488395 -40141755 - L1MA8 LINE L1 -342 5949 5845 1945 151 6 37 chr5 159488398 159488549 -40141601 - MSTA LTR MaLR -87 341 187 2234 115 3 0 chr5 159488549 159488853 -40141297 - AluY SINE Alu -6 305 1 1945 151 6 37 chr5 159488853 159489053 -40141097 - MSTA LTR MaLR -241 187 1 1105 176 64 38 chr5 159489053 159489319 -40140831 - MER67C LTR ERV1 -325 385 113 268 116 43 58 chr5 159489342 159489411 -40140739 - L1MA8 LINE L1 -18 6273 6206 * 16188 137 41 31 chr5 159489401 159492475 -40137675 + L1PA8A LINE L1 1 3106 -3756 955 114 0 0 chr5 159492478 159492610 -40137540 + AluYb8 SINE Alu 1 132 -186 235 224 0 0 chr5 159492611 159492669 -40137481 + L1 LINE L1 3098 3155 -3707 * 2407 211 5 10 chr5 159492664 159493257 -40136893 + L1 LINE L1 4649 5238 -908 1884 141 76 20 chr5 159493258 159493613 -40136537 - THE1C LTR MaLR 0 375 1 8539 139 36 49 chr5 159493613 159493918 -40136232 - THE1B-int LTR MaLR 0 1580 1273 2104 117 57 26 chr5 159493918 159494270 -40135880 - THE1B LTR MaLR 0 364 2 8539 139 36 49 chr5 159494270 159495565 -40134585 - THE1B-int LTR MaLR -307 1273 1 1960 127 63 28 chr5 159495565 159495927 -40134223 - THE1C LTR MaLR 0 375 1 3007 104 36 7 chr5 159495927 159496455 -40133695 + L1P5 LINE L1 5235 5777 -374 333 0 0 0 chr5 159496455 159496492 -40133658 + (CA)n Simple_repeat Simple_repeat 2 38 0 1256 168 70 7 chr5 159496530 159496815 -40133335 - L1MA8 LINE L1 -279 6012 5710 441 174 55 18 chr5 159496815 159496924 -40133226 - MER67C LTR ERV1 -596 114 2 287 238 0 0 chr5 159497413 159497476 -40132674 + L2 LINE L2 3251 3313 0 1274 175 60 0 chr5 159497798 159498066 -40132084 + L1PA8A LINE L1 3320 3603 -3259 236 192 0 0 chr5 159498067 159498119 -40132031 + T-rich Low_complexity Low_complexity 1 52 0 7545 32 0 0 chr5 159498119 159499042 -40131108 - L1PA3 LINE L1 0 6155 5231 2712 21 0 0 chr5 159499042 159499381 -40130769 + L1P LINE L1 4929 5267 -879 * 10399 144 19 60 chr5 159499373 159501570 -40128580 + L1PA8A LINE L1 3592 5698 -1164 40737 32 23 2 chr5 159501570 159507586 -40122564 - L1PA2 LINE L1 -4 6151 2 4616 153 58 0 chr5 159507588 159508696 -40121454 + L1PA8A LINE L1 5688 6847 0 630 295 54 18 chr5 159509394 159509618 -40120532 - MIR SINE MIR 0 262 31 400 311 73 18 chr5 159510416 159510580 -40119570 - L2 LINE L2 -22 3291 3119 1996 141 0 0 chr5 159510790 159511096 -40119054 - AluSq SINE Alu 0 306 1 196 352 14 0 chr5 159511126 159511197 -40118953 - L3 LINE CR1 -8 1569 1498 2217 275 85 27 chr5 159511203 159511379 -40118771 - L2 LINE L2 0 3313 3149 1125 51 76 13 chr5 159511379 159511536 -40118614 + L1PA5 LINE L1 5988 6154 0 2217 275 85 27 chr5 159511536 159512465 -40117685 - L2 LINE L2 -164 3149 2135 1213 257 99 9 chr5 159512552 159512976 -40117174 + MLT1H LTR MaLR 88 549 0 317 275 105 15 chr5 159513122 159513287 -40116863 - MLT1I LTR MaLR -1 437 264 265 230 27 0 chr5 159513347 159513421 -40116729 - MLT1J2 LTR MaLR -304 146 71 677 259 53 6 chr5 159513549 159513719 -40116431 + MER45A DNA AcHobo 1 178 0 428 269 92 8 chr5 159513733 159513852 -40116298 + MER5B DNA MER1_type 2 130 -48 198 0 0 0 chr5 159513852 159513874 -40116276 + (T)n Simple_repeat Simple_repeat 1 22 0 455 152 9 9 chr5 159514125 159514230 -40115920 + L1MC4 LINE L1 6984 7088 -954 1821 196 43 7 chr5 159514231 159514649 -40115501 + L1MC4 LINE L1 7238 7670 -372 274 261 52 37 chr5 159514673 159514807 -40115343 + L1ME LINE L1 5644 5779 -342 21 36 0 0 chr5 159514868 159514896 -40115254 + AT_rich Low_complexity Low_complexity 1 28 0 848 256 234 8 chr5 159516151 159516792 -40113358 + LTR50 LTR ERVL 3 788 -7 250 300 79 38 chr5 159517706 159517881 -40112269 + MIR3 SINE MIR 13 189 -64 * 1032 283 82 26 chr5 159517877 159518304 -40111846 - L2 LINE L2 -15 3298 2848 317 339 85 24 chr5 159518608 159518773 -40111377 + MIR SINE MIR 2 176 -86 4397 126 40 6 chr5 159518777 159519561 -40110589 - L1PA15 LINE L1 -9 6156 5347 313 368 72 33 chr5 159519625 159519932 -40110218 + L2 LINE L2 2946 3264 -8 211 205 0 0 chr5 159521096 159521135 -40109015 + A-rich Low_complexity Low_complexity 1 39 0 537 236 91 30 chr5 159522053 159522252 -40107898 + Charlie8 DNA MER1_type 76 286 -2131 198 339 208 14 chr5 159522434 159522723 -40107427 + L2 LINE L2 2396 2740 -574 566 317 70 56 chr5 159524393 159524819 -40105331 - LTR67 LTR ERVL -3 554 123 218 392 20 0 chr5 159525090 159525192 -40104958 + L2 LINE L2 3190 3293 -20 235 222 0 0 chr5 159525207 159525261 -40104889 - MLT1K LTR MaLR -123 465 412 6489 47 28 0 chr5 159525269 159526091 -40104059 - MER11D LTR ERVK -22 875 31 951 32 0 0 chr5 159526216 159526339 -40103811 - L1P LINE L1 -941 5205 5083 21 36 0 0 chr5 159526339 159526367 -40103783 + AT_rich Low_complexity Low_complexity 1 28 0 251 329 0 0 chr5 159526442 159526512 -40103638 + Charlie8 DNA MER1_type 185 254 -2163 228 227 127 60 chr5 159527277 159527427 -40102723 + L1ME LINE L1 5630 5789 -332 900 214 87 0 chr5 159527489 159527685 -40102465 - MER58A DNA MER1_type 0 224 12 479 285 78 16 chr5 159527764 159527957 -40102193 - MIR SINE MIR 0 262 58 21 36 0 0 chr5 159528883 159528911 -40101239 + AT_rich Low_complexity Low_complexity 1 28 0 334 263 79 40 chr5 159529646 159529798 -40100352 - MIR SINE MIR -41 221 64 201 147 0 0 chr5 159530756 159530790 -40099360 + (CA)n Simple_repeat Simple_repeat 1 34 0 230 182 0 18 chr5 159532158 159532213 -40097937 + A-rich Low_complexity Low_complexity 3 56 0 350 367 7 0 chr5 159533597 159533736 -40096414 - L2 LINE L2 -22 3291 3152 3742 173 61 20 chr5 159533737 159534556 -40095594 + L1MA5A LINE L1 4533 5406 -894 225 0 0 0 chr5 159534556 159534581 -40095569 + (CA)n Simple_repeat Simple_repeat 2 26 0 3742 173 61 20 chr5 159534581 159534709 -40095441 + L1MA5A LINE L1 5406 5527 -773 2168 138 8 3 chr5 159534709 159535087 -40095063 + L1MA5A LINE L1 5914 6293 -4 403 348 72 14 chr5 159535103 159535382 -40094768 - L2 LINE L2 -145 3168 2874 314 402 23 6 chr5 159535381 159535555 -40094595 - L2 LINE L2 -761 2553 2377 * 2098 120 3 19 chr5 159535577 159535931 -40094219 + AluSq SINE Alu 1 313 0 7868 16 0 0 chr5 159536295 159537339 -40092811 - L1PA2 LINE L1 -1 6154 5111 1016 24 0 0 chr5 159537339 159537465 -40092685 + L1P LINE L1 2320 2445 -3701 675 233 175 5 chr5 159537481 159537687 -40092463 + MIR SINE MIR 22 262 0 556 278 166 17 chr5 159537722 159538024 -40092126 - MLT1K LTR MaLR 0 588 242 2489 142 76 4 chr5 159538069 159538519 -40091631 - LTR1B LTR ERV1 -344 482 1 371 346 8 8 chr5 159538628 159538755 -40091395 + L2 LINE L2 3142 3268 -4 191 333 30 15 chr5 159540134 159540200 -40089950 + L2 LINE L2 2998 3064 -249 304 338 58 60 chr5 159540934 159541555 -40088595 + L2 LINE L2 2620 3259 -13 186 225 0 45 chr5 159541555 159541644 -40088506 + GA-rich Low_complexity Low_complexity 1 85 0 5546 61 6 7 chr5 159542298 159543021 -40087129 - L1PA7 LINE L1 -11 6458 5737 4139 31 0 0 chr5 159543021 159543533 -40086617 + L1P LINE L1 3908 4419 -1727 * 7118 71 32 0 chr5 159543531 159544607 -40085543 - L1PA7 LINE L1 -727 5742 4629 1577 103 0 0 chr5 159544602 159544826 -40085324 - L1PA7 LINE L1 -6237 224 1 * 222 305 49 12 chr5 159544829 159544911 -40085239 + L2 LINE L2 2755 2839 -475 254 244 23 81 chr5 159545083 159545169 -40084981 - MER5C DNA MER1_type -239 85 5 251 237 99 86 chr5 159545237 159545469 -40084681 + L2 LINE L2 2959 3193 -120 202 326 45 0 chr5 159545536 159545625 -40084525 - MIR SINE MIR -86 176 84 186 333 31 42 chr5 159545696 159545792 -40084358 - MIR SINE MIR -74 134 40 328 345 85 6 chr5 159546022 159546187 -40083963 + MIR SINE MIR 68 245 -17 359 268 127 45 chr5 159547009 159547290 -40082860 + L1ME4a LINE L1 5660 5989 -132 873 193 22 66 chr5 159547290 159547518 -40082632 + MER20 DNA MER1_type 2 219 0 359 268 127 45 chr5 159547518 159547661 -40082489 + L1ME4a LINE L1 5989 6119 -2 27 49 0 0 chr5 159548409 159548450 -40081700 + AT_rich Low_complexity Low_complexity 1 41 0 2240 98 7 3 chr5 159548637 159548932 -40081218 - AluSg SINE Alu -14 296 1 181 233 47 0 chr5 159549411 159549454 -40080696 - L2 LINE L2 0 3313 3269 * 501 243 136 11 chr5 159549447 159549624 -40080526 - MIR SINE MIR -62 200 2 279 336 70 39 chr5 159550071 159550124 -40080026 + MIR SINE MIR 51 101 -161 2321 97 0 0 chr5 159550124 159550423 -40079727 - AluY SINE Alu -12 299 1 279 336 70 39 chr5 159550423 159550497 -40079653 + MIR SINE MIR 101 182 -80 469 168 10 20 chr5 159550751 159550852 -40079298 + MLT1I LTR MaLR 310 409 0 621 347 97 18 chr5 159550854 159551309 -40078841 + L3 LINE CR1 568 1058 -519 1038 283 152 7 chr5 159551360 159551813 -40078337 + LTR33 LTR ERVL 3 521 0 26 50 0 0 chr5 159551821 159551861 -40078289 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 159552261 159552284 -40077866 + AT_rich Low_complexity Low_complexity 1 23 0 259 288 15 0 chr5 159552458 159552524 -40077626 + MIR SINE MIR 77 143 -119 397 335 105 15 chr5 159553005 159553205 -40076945 + MIR SINE MIR 16 233 -29 191 283 151 19 chr5 159553244 159553350 -40076800 - MIR SINE MIR -57 205 86 202 130 22 43 chr5 159553378 159553424 -40076726 + (TTA)n Simple_repeat Simple_repeat 3 47 0 220 304 152 3 chr5 159553539 159553698 -40076452 + MIR SINE MIR 45 221 -41 288 310 80 18 chr5 159554875 159554978 -40075172 + L2 LINE L2 3189 3301 -12 219 36 0 0 chr5 159554978 159555006 -40075144 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr5 159555570 159555591 -40074559 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 159555653 159555675 -40074475 + AT_rich Low_complexity Low_complexity 1 22 0 422 304 25 31 chr5 159555833 159555994 -40074156 - MER5A DNA MER1_type -1 188 29 2210 105 0 26 chr5 159556165 159556469 -40073681 + AluSq SINE Alu 1 296 -17 943 265 33 99 chr5 159556884 159557461 -40072689 - MLT1K LTR MaLR -4 584 46 233 182 18 0 chr5 159557638 159557693 -40072457 + GA-rich Low_complexity Low_complexity 3 58 0 192 298 21 0 chr5 159557795 159557842 -40072308 - L3 LINE CR1 -7 1570 1523 1015 182 64 21 chr5 159557945 159558068 -40072082 + MER33 DNA MER1_type 1 117 -2468 2173 106 3 19 chr5 159558068 159558379 -40071771 + AluSg SINE Alu 1 306 -4 1015 182 64 21 chr5 159558379 159558535 -40071615 + MER33 DNA MER1_type 117 292 -32 562 320 151 16 chr5 159558589 159558627 -40071523 + L2 LINE L2 2870 2902 -370 3482 118 25 14 chr5 159558627 159559146 -40071004 + LTR45 LTR ERV1 1 525 0 562 320 151 16 chr5 159559146 159559462 -40070688 + L2 LINE L2 2902 3269 -3 191 256 0 0 chr5 159560640 159560679 -40069471 + MIR SINE MIR 220 258 -4 342 171 0 0 chr5 159561409 159561479 -40068671 + GA-rich Low_complexity Low_complexity 3 72 0 497 308 81 55 chr5 159561776 159562120 -40068030 - MLT1J2 LTR MaLR -61 389 37 248 188 72 14 chr5 159562193 159562262 -40067888 + MIR SINE MIR 126 198 -64 3192 105 2 11 chr5 159562339 159562815 -40067335 - MER1A DNA MER1_type 0 529 58 202 254 0 63 chr5 159562838 159562901 -40067249 - MIR SINE MIR -77 185 127 856 278 29 7 chr5 159562902 159563183 -40066967 + MLT1H LTR MaLR 1 287 -262 231 274 0 82 chr5 159563380 159563453 -40066697 - MIR SINE MIR -137 125 59 199 304 33 87 chr5 159563492 159563584 -40066566 - MIR SINE MIR -169 93 7 323 287 35 0 chr5 159563689 159563776 -40066374 + L2 LINE L2 3179 3268 -4 310 286 78 122 chr5 159564728 159565123 -40065027 - L2 LINE L2 -26 3287 2910 361 299 136 6 chr5 159566031 159566208 -40063942 + L2 LINE L2 3114 3313 0 4355 14 0 4 chr5 159566550 159567051 -40063099 + L1PA2 LINE L1 5656 6154 -1 330 316 35 0 chr5 159567156 159567270 -40062880 + MER91B DNA MER1_type 12 129 -61 213 220 20 0 chr5 159567292 159567342 -40062808 + MER91B DNA MER1_type 94 144 -46 2268 97 3 0 chr5 159567641 159567939 -40062211 + AluY SINE Alu 1 299 -12 353 200 0 24 chr5 159568225 159568310 -40061840 + MLT1K LTR MaLR 503 585 -3 223 269 0 0 chr5 159568490 159568542 -40061608 + MIR SINE MIR 209 260 -2 293 233 39 39 chr5 159568919 159569048 -40061102 + LTR67 LTR ERVL 412 540 -17 425 331 29 0 chr5 159569204 159569385 -40060765 - MIR SINE MIR -52 210 18 475 231 100 93 chr5 159570490 159570780 -40059370 + MER102b DNA MER1_type 49 340 -1 21 0 0 0 chr5 159570938 159570959 -40059191 + AT_rich Low_complexity Low_complexity 1 21 0 1060 218 32 8 chr5 159570961 159571209 -40058941 - MLT1A1 LTR MaLR -46 319 66 5607 116 42 10 chr5 159571222 159572512 -40057638 - L1MA8 LINE L1 -6 6285 4957 1633 195 83 60 chr5 159572513 159573016 -40057134 - L1M3e LINE L1 -6509 521 7 228 246 0 18 chr5 159573477 159573534 -40056616 + CT-rich Low_complexity Low_complexity 1 56 0 408 328 83 26 chr5 159573824 159574053 -40056097 - MIR SINE MIR -19 243 2 207 368 59 22 chr5 159574595 159574731 -40055419 - MIR3 SINE MIR -63 145 5 495 292 157 0 chr5 159574833 159575011 -40055139 + L2 LINE L2 1773 1978 -1336 356 324 9 0 chr5 159575432 159575537 -40054613 + MIR SINE MIR 117 222 -40 757 302 65 29 chr5 159576025 159576333 -40053817 - L2 LINE L2 -956 2358 2040 521 286 202 14 chr5 159576343 159576630 -40053520 + LTR16B LTR ERVL 105 445 -19 1812 183 0 3 chr5 159576659 159576960 -40053190 - AluJo SINE Alu -12 300 1 226 228 53 18 chr5 159577070 159577127 -40053023 + L2 LINE L2 2692 2750 -564 300 269 234 0 chr5 159578020 159578165 -40051985 + L1ME LINE L1 5621 5799 -322 569 276 0 0 chr5 159578175 159578291 -40051859 + FLAM_A SINE Alu 1 116 -17 1795 113 3 138 chr5 159578296 159578674 -40051476 - AluSx SINE Alu 0 312 1 1301 199 0 0 chr5 159578828 159579054 -40051096 + AluJo SINE Alu 67 292 -20 2269 103 140 8 chr5 159579912 159580290 -40049860 + MSTA LTR MaLR 1 428 0 263 226 0 0 chr5 159580405 159580458 -40049692 - LTR67 LTR ERVL -4 553 501 2132 118 48 25 chr5 159581187 159581543 -40048607 + THE1B LTR MaLR 1 364 0 213 94 0 0 chr5 159581748 159581780 -40048370 + (TC)n Simple_repeat Simple_repeat 1 32 0 2627 147 24 0 chr5 159581831 159582247 -40047903 - MSTA LTR MaLR -2 426 1 497 342 25 12 chr5 159582370 159582531 -40047619 + L2 LINE L2 3108 3270 -2 547 281 158 9 chr5 159583251 159583479 -40046671 - MIR SINE MIR 0 262 1 323 229 105 0 chr5 159583479 159583584 -40046566 + MER103 DNA DNA 3 118 -48 365 296 126 7 chr5 159583782 159583917 -40046233 - MIR SINE MIR -110 152 2 555 256 29 29 chr5 159583997 159584169 -40045981 + MIR SINE MIR 77 248 -14 242 91 0 0 chr5 159584212 159584245 -40045905 - U2 snRNA snRNA -155 33 1 515 385 59 11 chr5 159585062 159585249 -40044901 - MER91A DNA MER1_type 0 196 1 * 680 304 100 57 chr5 159585249 159585410 -40044740 + L2 LINE L2 2595 2747 -567 3070 117 90 0 chr5 159585410 159585921 -40044229 + L1MB1 LINE L1 5607 6163 -5 680 304 100 57 chr5 159585921 159586101 -40044049 + L2 LINE L2 2747 2951 -363 259 263 17 34 chr5 159586399 159586517 -40043633 - MLT1H LTR MaLR -387 162 47 591 292 133 26 chr5 159586568 159586907 -40043243 + L2 LINE L2 2939 3313 0 187 250 0 0 chr5 159587107 159587143 -40043007 + MIR SINE MIR 114 149 -59 359 345 60 36 chr5 159587850 159588048 -40042102 + L1MC/D LINE L1 5458 5665 -2143 393 22 0 0 chr5 159588048 159588094 -40042056 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 359 345 60 36 chr5 159588094 159588144 -40042006 + L1MC/D LINE L1 5665 5712 -2096 46 0 0 0 chr5 159588335 159588381 -40041769 + AT_rich Low_complexity Low_complexity 1 46 0 288 342 248 10 chr5 159588978 159589180 -40040970 - MIR SINE MIR 0 262 13 207 303 28 55 chr5 159589504 159589613 -40040537 - MIR SINE MIR -71 191 86 226 299 104 0 chr5 159589618 159589695 -40040455 + MIR SINE MIR 96 180 -82 252 328 81 40 chr5 159589796 159589970 -40040180 + MIR SINE MIR 69 249 -13 182 331 8 66 chr5 159591096 159591217 -40038933 - MIR SINE MIR -40 222 109 288 330 9 52 chr5 159591419 159591649 -40038501 - MLT1J LTR MaLR -192 319 100 340 308 103 42 chr5 159591726 159591940 -40038210 - L2 LINE L2 -730 2584 2358 29211 116 40 16 chr5 159591957 159597979 -40032171 + L1PA7 LINE L1 12 6183 0 2238 108 0 0 chr5 159597998 159598294 -40031856 - AluSg SINE Alu -14 296 1 285 345 52 0 chr5 159598296 159598412 -40031738 - L2 LINE L2 -954 2360 2239 1073 229 5 0 chr5 159598491 159598705 -40031445 + MER20 DNA MER1_type 1 215 -4 26 30 0 0 chr5 159599596 159599629 -40030521 + AT_rich Low_complexity Low_complexity 1 33 0 400 307 107 41 chr5 159600199 159600658 -40029492 + L2 LINE L2 2825 3313 0 214 157 20 39 chr5 159601334 159601385 -40028765 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 180 0 0 0 chr5 159602193 159602213 -40027937 + (CA)n Simple_repeat Simple_repeat 2 21 0 372 143 0 0 chr5 159602213 159602285 -40027865 + (GA)n Simple_repeat Simple_repeat 1 72 0 560 156 9 0 chr5 159602554 159602663 -40027487 + GA-rich Low_complexity Low_complexity 3 112 0 748 246 108 39 chr5 159603224 159603585 -40026565 - MLT1B LTR MaLR -1 389 4 352 338 48 7 chr5 159604621 159604766 -40025384 + MIR SINE MIR 111 261 -1 503 330 55 10 chr5 159604866 159605066 -40025084 - MIR SINE MIR -44 218 10 590 298 119 8 chr5 159605886 159606121 -40024029 - MIR SINE MIR -1 261 1 377 306 48 24 chr5 159606268 159606477 -40023673 - L2 LINE L2 -474 2840 2627 1529 176 24 72 chr5 159606914 159607289 -40022861 + L1MD2 LINE L1 6002 6358 -1 683 283 44 28 chr5 159607436 159607687 -40022463 + MIR SINE MIR 7 261 -1 411 353 24 92 chr5 159607705 159608172 -40021978 + L2 LINE L2 2838 3272 0 333 0 0 0 chr5 159608487 159608524 -40021626 + (CA)n Simple_repeat Simple_repeat 2 38 0 234 0 0 0 chr5 159608523 159608549 -40021601 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 593 266 222 8 chr5 159609364 159609616 -40020534 - L2 LINE L2 0 3313 3008 252 272 281 9 chr5 159609867 159609981 -40020169 - MIR SINE MIR -97 165 21 277 372 47 26 chr5 159610165 159610399 -40019751 - L2 LINE L2 -190 3082 2844 766 284 29 0 chr5 159611667 159611871 -40018279 + MIR SINE MIR 47 256 -6 201 133 0 0 chr5 159611873 159611903 -40018247 + (CAT)n Simple_repeat Simple_repeat 1 30 0 331 285 186 29 chr5 159611938 159612110 -40018040 + MIR SINE MIR 14 212 -50 3867 160 31 6 chr5 159612126 159612858 -40017292 - L1MA9 LINE L1 -5 6307 5557 367 353 72 0 chr5 159613302 159613469 -40016681 - MIR SINE MIR -26 236 58 21 71 0 0 chr5 159614126 159614168 -40015982 + AT_rich Low_complexity Low_complexity 1 42 0 10733 225 18 20 chr5 159614643 159617763 -40012387 - L1PA15-16 LINE L1 -1993 5591 2469 454 328 23 31 chr5 159618437 159618788 -40011362 - L1PA15-16 LINE L1 -7227 354 7 203 182 39 13 chr5 159619338 159619415 -40010735 + (TA)n Simple_repeat Simple_repeat 2 80 0 1051 265 88 62 chr5 159619428 159619549 -40010601 + L1ME LINE L1 4177 4293 -1853 1989 151 0 0 chr5 159619549 159619840 -40010310 - AluSx SINE Alu -21 291 1 1051 265 88 62 chr5 159619840 159620827 -40009323 + L1ME LINE L1 4293 5314 -832 4531 121 13 37 chr5 159620841 159621659 -40008491 - L1PB1 LINE L1 -1 6866 6068 1842 28 0 0 chr5 159621673 159621890 -40008260 - L1PA5 LINE L1 -2 6152 5936 782 58 0 0 chr5 159621893 159621997 -40008153 + L1PA5 LINE L1 5850 5953 -201 * 5797 199 11 8 chr5 159621991 159623305 -40006845 - L1PB1 LINE L1 -776 6086 4769 4404 137 50 7 chr5 159623304 159623695 -40006455 - L1PB1 LINE L1 -3520 3342 2969 * 2611 29 7 3 chr5 159623695 159624002 -40006148 - AluY SINE Alu -3 308 1 4404 137 50 7 chr5 159624002 159624765 -40005385 - L1PB1 LINE L1 -3893 2969 2141 7084 94 6 20 chr5 159624806 159625878 -40004272 - MER11C LTR ERVK -14 1057 1 4091 196 55 12 chr5 159625878 159626094 -40004056 - L1PB1 LINE L1 -4719 2144 1939 2331 108 3 9 chr5 159626094 159626409 -40003741 - AluSq SINE Alu 0 313 1 4091 196 55 12 chr5 159626409 159628105 -40002045 - L1PB1 LINE L1 -4924 1939 6 526 281 93 71 chr5 159628135 159628544 -40001606 + L1ME LINE L1 5315 5731 -438 1462 180 4 0 chr5 159628689 159628961 -40001189 + L1MC1 LINE L1 6061 6333 0 609 234 212 18 chr5 159628976 159629198 -40000952 + AluSg1 SINE Alu 12 276 -33 189 0 0 0 chr5 159629199 159629220 -40000930 + (CA)n Simple_repeat Simple_repeat 2 22 0 280 300 24 10 chr5 159629223 159629413 -40000737 + HAL1b LINE L1 430 552 -865 * 1958 172 98 29 chr5 159629403 159629967 -40000183 + L1MB8 LINE L1 5232 5835 -343 1677 186 25 35 chr5 159629967 159630364 -39999786 + L1MA5 LINE L1 5908 6300 0 1649 174 16 30 chr5 159630364 159630729 -39999421 + L1MB8 LINE L1 5811 6172 -6 33 0 0 0 chr5 159631345 159631378 -39998772 + AT_rich Low_complexity Low_complexity 1 33 0 2150 111 3 0 chr5 159631545 159631860 -39998290 + AluSg SINE Alu 1 310 0 441 156 0 0 chr5 159631971 159632048 -39998102 + (TAGA)n Simple_repeat Simple_repeat 2 78 0 2645 256 41 19 chr5 159632145 159632894 -39997256 - MER21B LTR ERV1 -58 805 40 841 313 51 19 chr5 159632913 159633876 -39996274 + L1ME3A LINE L1 4934 5929 -241 4782 159 33 24 chr5 159634260 159635193 -39994957 + L1PB4 LINE L1 4844 5787 -369 2287 116 6 3 chr5 159635193 159635504 -39994646 + AluSx SINE Alu 1 312 0 4782 159 33 24 chr5 159635504 159635871 -39994279 + L1PB4 LINE L1 5787 6149 -7 503 290 141 76 chr5 159635878 159636274 -39993876 + L2 LINE L2 2530 2951 -363 2181 135 0 0 chr5 159636697 159637000 -39993150 - AluSx SINE Alu -9 303 1 540 231 12 52 chr5 159637941 159638114 -39992036 - MIR SINE MIR 0 262 97 486 139 0 0 chr5 159638499 159638585 -39991565 + (TGGA)n Simple_repeat Simple_repeat 1 86 0 359 328 21 48 chr5 159639310 159639496 -39990654 + MIR SINE MIR 64 244 -18 249 315 59 25 chr5 159639749 159639889 -39990261 + MIR SINE MIR 55 198 -63 576 197 7 112 chr5 159639929 159640081 -39990069 + L2 LINE L2 3178 3313 0 2126 209 67 77 chr5 159641024 159641685 -39988465 + MLT1E1 LTR MaLR 1 654 0 447 284 85 108 chr5 159642540 159643187 -39986963 + L2 LINE L2 2614 3271 -1 192 324 14 14 chr5 159643567 159643638 -39986512 + L2 LINE L2 3168 3238 -75 24 32 0 0 chr5 159643682 159643713 -39986437 + AT_rich Low_complexity Low_complexity 1 31 0 258 351 164 10 chr5 159643785 159643993 -39986157 - MIR SINE MIR -2 260 21 698 254 50 18 chr5 159644476 159644696 -39985454 - MIR SINE MIR -34 228 2 542 311 78 33 chr5 159645568 159645812 -39984338 - MIR SINE MIR -2 260 6 2311 99 0 0 chr5 159646184 159646487 -39983663 - AluSx SINE Alu -9 303 1 267 254 0 0 chr5 159646525 159646588 -39983562 + (CTA)n Simple_repeat Simple_repeat 2 64 0 257 325 24 86 chr5 159646759 159646968 -39983182 + L2 LINE L2 3075 3270 -43 470 277 60 71 chr5 159648256 159648523 -39981627 + Charlie8 DNA MER1_type 165 428 -1989 1469 84 0 58 chr5 159648535 159648581 -39981569 + AluY SINE Alu 99 146 -165 2515 3 41 7 chr5 159648581 159648871 -39981279 + AluY SINE Alu 1 300 -11 1469 84 0 58 chr5 159648871 159649050 -39981100 + AluY SINE Alu 146 311 0 643 283 85 36 chr5 159649103 159649888 -39980262 + L1MC/D LINE L1 4698 5526 -747 30656 104 9 60 chr5 159649888 159656369 -39973781 - L1PA7 LINE L1 0 6154 12 42 0 0 0 chr5 159656768 159656810 -39973340 + AT_rich Low_complexity Low_complexity 1 42 0 246 317 68 12 chr5 159656883 159657132 -39973018 - L1MEc LINE L1 -4869 1441 1179 258 113 32 16 chr5 159657162 159657224 -39972926 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 668 206 0 7 chr5 159657256 159657392 -39972758 + MER47A DNA MER2_type 1 135 -231 920 162 69 49 chr5 159657510 159657714 -39972436 - MER2 DNA MER2_type -135 210 3 * 1407 160 0 4 chr5 159657714 159657950 -39972200 + MER47A DNA MER2_type 132 366 0 332 247 77 28 chr5 159657952 159658134 -39972016 - L1MEc LINE L1 -5040 1079 889 4729 129 27 41 chr5 159658261 159659328 -39970822 + L1PA15 LINE L1 5171 6162 0 629 326 105 28 chr5 159659767 159660197 -39969953 - L1MEc LINE L1 -4589 1721 1259 370 268 60 53 chr5 159660207 159660358 -39969792 - L1MEc LINE L1 -4910 1209 1054 1848 105 0 0 chr5 159660358 159660596 -39969554 - AluSq SINE Alu -24 289 52 370 268 60 53 chr5 159660596 159660728 -39969422 - L1MEc LINE L1 -5065 1054 924 23 33 0 0 chr5 159660732 159660762 -39969388 + AT_rich Low_complexity Low_complexity 1 30 0 322 261 43 0 chr5 159660869 159660961 -39969189 - L1MEc LINE L1 -5306 813 718 1151 317 21 8 chr5 159661265 159661653 -39968497 + LTR16C LTR ERVL 68 460 -31 394 276 140 20 chr5 159662045 159662233 -39967917 - L1MEd LINE L1 -5004 1115 951 1457 221 13 19 chr5 159662233 159662541 -39967609 - AluJo SINE Alu -1 311 6 394 276 140 20 chr5 159662541 159662808 -39967342 - L1MEd LINE L1 -5168 951 605 195 42 0 0 chr5 159662957 159662981 -39967169 + (TA)n Simple_repeat Simple_repeat 2 25 0 230 247 49 37 chr5 159663215 159663296 -39966854 - L2 LINE L2 -1 3271 3190 791 295 81 34 chr5 159663364 159663659 -39966491 + L3 LINE CR1 1257 1565 -12 281 289 162 17 chr5 159663634 159663807 -39966343 + MIR SINE MIR 29 226 -36 * 2167 120 0 0 chr5 159664128 159664428 -39965722 - AluSx SINE Alu -12 300 1 456 19 0 0 chr5 159665917 159665970 -39964180 + (TA)n Simple_repeat Simple_repeat 1 53 0 39659 65 2 0 chr5 159666175 159672305 -39957845 + L1PA5 LINE L1 11 6151 -3 283 264 28 47 chr5 159672350 159672456 -39957694 + MIR SINE MIR 158 261 -1 2108 121 0 3 chr5 159672808 159673098 -39957052 + AluSg SINE Alu 12 300 -10 390 234 26 0 chr5 159673432 159673509 -39956641 - L2 LINE L2 -8 3264 3186 313 333 57 42 chr5 159673743 159673785 -39956365 - L2 LINE L2 -97 3216 3176 2512 156 19 14 chr5 159673785 159674209 -39955941 + MSTB LTR MaLR 1 426 0 313 333 57 42 chr5 159674209 159674430 -39955720 - L2 LINE L2 -137 3176 2949 241 280 0 0 chr5 159674819 159674869 -39955281 + L2 LINE L2 3215 3264 -8 234 326 141 16 chr5 159675385 159675569 -39954581 - MIR SINE MIR 0 262 56 215 205 0 0 chr5 159675583 159675622 -39954528 + MIR SINE MIR 3 41 -221 201 364 0 0 chr5 159676511 159676577 -39953573 - L2 LINE L2 -21 3292 3227 207 0 0 0 chr5 159677060 159677083 -39953067 + (A)n Simple_repeat Simple_repeat 1 23 0 22 35 0 0 chr5 159677232 159677261 -39952889 + AT_rich Low_complexity Low_complexity 1 29 0 2747 125 14 21 chr5 159677882 159678313 -39951837 + MSTC LTR MaLR 1 428 0 571 314 16 0 chr5 159678585 159678779 -39951371 - MER117 DNA MER1_type 0 197 1 568 311 43 14 chr5 159679054 159679263 -39950887 + MIR SINE MIR 8 222 -40 283 319 79 13 chr5 159679370 159679498 -39950652 + MIR SINE MIR 20 151 -61 282 332 134 11 chr5 159681039 159681226 -39948924 + L2 LINE L2 2826 3035 -237 229 194 48 0 chr5 159681297 159681359 -39948791 - MLT1K LTR MaLR -2 586 522 225 94 0 0 chr5 159681381 159681413 -39948737 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 345 276 45 8 chr5 159681417 159681551 -39948599 - MLT1K LTR MaLR -71 517 379 656 313 27 41 chr5 159681594 159681888 -39948262 - MLT1K LTR MaLR -288 300 11 837 238 52 29 chr5 159682796 159683006 -39947144 - MIR SINE MIR -40 222 8 419 289 39 8 chr5 159683034 159683162 -39946988 + MIR SINE MIR 23 154 -108 490 280 40 23 chr5 159683978 159684153 -39945997 - MIR SINE MIR -9 253 76 287 132 59 15 chr5 159684441 159684509 -39945641 - MLT1L LTR MaLR -361 254 184 475 293 125 64 chr5 159684854 159685446 -39944704 + L2 LINE L2 2576 3211 -102 2172 192 21 9 chr5 159685446 159685867 -39944283 - MSTB LTR MaLR 0 426 1 475 293 125 64 chr5 159685867 159685967 -39944183 + L2 LINE L2 3211 3304 -9 419 304 51 0 chr5 159686335 159686473 -39943677 + MIR SINE MIR 75 219 -43 453 277 14 7 chr5 159687037 159687178 -39942972 - MER117 DNA MER1_type -50 147 6 205 53 79 0 chr5 159688862 159688900 -39941250 + A-rich Low_complexity Low_complexity 4 44 0 414 297 78 78 chr5 159689254 159689560 -39940590 + L1MC/D LINE L1 4457 4765 -1381 1523 89 0 0 chr5 159689560 159689762 -39940388 - L1PA5 LINE L1 -6 6148 5947 414 297 78 78 chr5 159689762 159689842 -39940308 + L1MC/D LINE L1 4764 4843 -1303 24 0 0 0 chr5 159689872 159689896 -39940254 + AT_rich Low_complexity Low_complexity 1 24 0 331 281 17 0 chr5 159689920 159690052 -39940098 + L1P LINE L1 4887 5020 -1126 1730 165 42 11 chr5 159690055 159690340 -39939810 + AluSx SINE Alu 1 294 -18 22 35 0 0 chr5 159690497 159690526 -39939624 + AT_rich Low_complexity Low_complexity 1 29 0 1209 254 75 11 chr5 159690592 159691033 -39939117 + L1MC/D LINE L1 5305 5766 -735 452 200 86 0 chr5 159691034 159691139 -39939011 + MER58 DNA MER1_type 2 115 -100 233 152 0 22 chr5 159691145 159691191 -39938959 + MER58 DNA MER1_type 2374 2418 -2 2468 79 3 0 chr5 159691332 159691636 -39938514 + AluSp SINE Alu 1 305 -8 2102 101 0 4 chr5 159691659 159691936 -39938214 + AluSg SINE Alu 9 284 -26 1184 232 59 69 chr5 159692084 159692532 -39937618 + L1MC5 LINE L1 7250 7692 -269 2203 120 0 13 chr5 159692532 159692848 -39937302 - AluSx SINE Alu 0 312 1 1184 232 59 69 chr5 159692848 159693011 -39937139 + L1MC5 LINE L1 7692 7855 -106 423 85 0 0 chr5 159693225 159693284 -39936866 + Alu SINE Alu 1 59 -259 190 250 165 92 chr5 159694111 159694275 -39935875 + MIR SINE MIR 87 262 0 561 311 144 19 chr5 159694757 159695027 -39935123 + L2 LINE L2 3005 3308 -5 186 71 0 0 chr5 159695200 159695228 -39934922 + (TA)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr5 159695262 159695291 -39934859 + AT_rich Low_complexity Low_complexity 1 29 0 362 352 34 23 chr5 159695477 159695653 -39934497 - MER5B DNA MER1_type 0 178 1 293 117 50 33 chr5 159696117 159696177 -39933973 + MLT1K LTR MaLR 511 571 -17 202 344 109 23 chr5 159696742 159696870 -39933280 + L2 LINE L2 3162 3300 -13 562 235 115 22 chr5 159696873 159697056 -39933094 + MIR SINE MIR 63 262 0 422 306 33 47 chr5 159698499 159698668 -39931482 + MIR SINE MIR 3 171 -37 1821 177 10 65 chr5 159698764 159699176 -39930974 - MLT1B LTR MaLR 0 390 2 668 234 135 18 chr5 159699897 159700119 -39930031 - MIR SINE MIR -14 248 1 528 303 179 29 chr5 159700375 159700871 -39929279 + L2 LINE L2 2461 3054 -218 340 294 34 17 chr5 159701615 159701734 -39928416 + L2 LINE L2 3189 3309 -4 22 35 0 0 chr5 159702232 159702261 -39927889 + AT_rich Low_complexity Low_complexity 1 29 0 267 286 33 22 chr5 159702634 159702725 -39927425 + MIR3 SINE MIR 2 93 -115 924 212 0 9 chr5 159702748 159702970 -39927180 + L1MC4 LINE L1 7505 7724 -318 246 282 64 13 chr5 159703005 159703083 -39927067 + L2 LINE L2 3178 3259 -54 281 273 182 12 chr5 159703198 159703363 -39926787 - MIR SINE MIR -47 215 23 345 388 105 10 chr5 159703851 159704145 -39926005 - L2 LINE L2 -92 3180 2859 1787 234 181 15 chr5 159704294 159704968 -39925182 - LTR50 LTR ERVL 0 795 10 1947 154 0 10 chr5 159705380 159705685 -39924465 - AluSx SINE Alu -9 303 2 249 241 35 35 chr5 159705757 159705844 -39924306 + MLT1K LTR MaLR 160 246 -342 249 273 58 36 chr5 159705992 159706131 -39924019 + MLT1K LTR MaLR 432 573 -15 361 292 38 48 chr5 159706259 159706468 -39923682 + L1ME4a LINE L1 5364 5570 -551 2115 88 25 0 chr5 159706817 159706941 -39923209 + AluY SINE Alu 1 120 -191 189 0 0 0 chr5 159706941 159706962 -39923188 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 2115 88 25 0 chr5 159706962 159707121 -39923029 + AluY SINE Alu 120 291 -20 241 273 36 0 chr5 159707576 159707631 -39922519 + L2 LINE L2 3249 3305 -8 198 71 0 0 chr5 159707757 159707785 -39922365 + (CA)n Simple_repeat Simple_repeat 2 29 0 198 286 0 39 chr5 159708112 159708189 -39921961 + L2 LINE L2 1967 2040 -1274 1962 168 0 0 chr5 159708544 159708841 -39921309 - AluJb SINE Alu -15 297 1 25 49 0 33 chr5 159708843 159708880 -39921270 + AT_rich Low_complexity Low_complexity 1 37 -22 1620 204 0 17 chr5 159708880 159709174 -39920976 + AluJo SINE Alu 1 289 -23 25 49 0 33 chr5 159709174 159709197 -39920953 + AT_rich Low_complexity Low_complexity 37 59 0 317 288 59 17 chr5 159709200 159709318 -39920832 + L1ME4a LINE L1 5773 5895 -226 1001 230 27 47 chr5 159709340 159709597 -39920553 + MIR SINE MIR 11 262 0 309 232 168 68 chr5 159709600 159709790 -39920360 + L1ME4a LINE L1 5902 6110 -11 683 376 60 12 chr5 159710354 159710840 -39919310 - L2 LINE L2 0 3313 2805 1350 246 81 20 chr5 159710964 159711358 -39918792 - MLT1F LTR MaLR -119 423 6 226 288 0 0 chr5 159711403 159711483 -39918667 + (TA)n Simple_repeat Simple_repeat 1 80 0 204 205 0 0 chr5 159711507 159711546 -39918604 + MIR SINE MIR 209 247 -15 225 0 0 0 chr5 159711550 159711575 -39918575 + (T)n Simple_repeat Simple_repeat 1 25 0 192 125 0 0 chr5 159711784 159711816 -39918334 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 1854 148 18 7 chr5 159711875 159712159 -39917991 - AluJb SINE Alu -25 287 1 24 0 0 0 chr5 159712424 159712448 -39917702 + AT_rich Low_complexity Low_complexity 1 24 0 353 235 59 0 chr5 159712448 159712533 -39917617 - L1MC4 LINE L1 -1339 6703 6614 415 251 228 6 chr5 159712650 159712821 -39917329 - MIR SINE MIR -29 233 25 860 242 14 5 chr5 159712829 159713048 -39917102 + MER58A DNA MER1_type 1 221 -3 199 231 19 19 chr5 159713573 159713625 -39916525 - L2 LINE L2 0 3313 3262 287 309 86 31 chr5 159713721 159713816 -39916334 - L2 LINE L2 -81 3232 3144 1769 170 5 52 chr5 159713816 159714108 -39916042 - MLT1A1 LTR MaLR 0 365 93 2244 99 0 0 chr5 159714108 159714422 -39915728 - AluSq SINE Alu 0 314 1 1769 170 5 52 chr5 159714422 159714511 -39915639 - MLT1A1 LTR MaLR -272 93 1 287 309 86 31 chr5 159714511 159714671 -39915479 - L2 LINE L2 -169 3144 2963 254 206 135 99 chr5 159714757 159714778 -39915372 - MIR SINE MIR -104 158 139 182 36 0 36 chr5 159714778 159714806 -39915344 + (CA)n Simple_repeat Simple_repeat 2 28 0 254 206 135 99 chr5 159714806 159714925 -39915225 - MIR SINE MIR -123 139 13 204 367 10 10 chr5 159715631 159715729 -39914421 + MIR SINE MIR 29 126 -136 24 0 0 0 chr5 159715844 159715868 -39914282 + AT_rich Low_complexity Low_complexity 1 24 0 415 284 150 0 chr5 159716527 159716654 -39913496 - MIR SINE MIR -101 161 16 2186 112 10 0 chr5 159717165 159717459 -39912691 + AluSp SINE Alu 1 297 -16 231 242 15 0 chr5 159717459 159717525 -39912625 + (TA)n Simple_repeat Simple_repeat 2 68 0 274 242 21 118 chr5 159718015 159718201 -39911949 - MLT1L LTR MaLR -324 291 124 2059 112 7 43 chr5 159720591 159720895 -39909255 - AluSg SINE Alu -17 293 1 1235 197 7 37 chr5 159721016 159721311 -39908839 - MER58B DNA MER1_type -2 339 54 288 0 0 0 chr5 159721335 159721367 -39908783 + (CA)n Simple_repeat Simple_repeat 2 33 0 24 0 0 0 chr5 159722095 159722119 -39908031 + AT_rich Low_complexity Low_complexity 1 24 0 303 294 49 10 chr5 159722196 159722298 -39907852 - MIR SINE MIR -127 135 30 248 239 30 15 chr5 159722337 159722404 -39907746 + MER5A DNA MER1_type 45 112 -77 466 248 75 71 chr5 159722467 159722681 -39907469 - MIR SINE MIR -10 252 38 399 276 0 0 chr5 159723331 159723418 -39906732 + L2 LINE L2 3227 3313 0 568 236 57 29 chr5 159723718 159723858 -39906292 + MIR3 SINE MIR 60 203 -5 382 287 25 25 chr5 159725768 159725890 -39904260 + MIR3 SINE MIR 87 208 0 898 272 94 39 chr5 159725955 159726393 -39903757 - MLT1J LTR MaLR -49 462 1 727 307 42 21 chr5 159726593 159727105 -39903045 + L1MCc LINE L1 17 1088 -5335 1034 238 82 50 chr5 159727441 159727509 -39902641 + L1MCc LINE L1 1129 1193 -5697 1417 208 112 13 chr5 159727509 159727903 -39902247 - MER63B DNA MER1_type -3 433 1 1034 238 82 50 chr5 159727903 159728686 -39901464 + L1MCc LINE L1 1193 2003 -4887 642 108 11 40 chr5 159728747 159728923 -39901227 + (TA)n Simple_repeat Simple_repeat 1 171 0 342 84 17 59 chr5 159728959 159729078 -39901072 + (TA)n Simple_repeat Simple_repeat 1 114 0 292 193 6 175 chr5 159729202 159729368 -39900782 + L1M1 LINE L1 2809 2979 -4619 1900 299 75 45 chr5 159730059 159731320 -39898830 + L2 LINE L2 1886 3190 -123 1548 107 31 9 chr5 159731320 159731545 -39898605 - MER30 DNA MER1_type 0 230 1 1900 299 75 45 chr5 159731545 159731669 -39898481 + L2 LINE L2 3190 3309 -4 460 273 41 0 chr5 159732129 159732250 -39897900 - MIR SINE MIR 0 262 137 349 278 137 45 chr5 159732282 159732505 -39897645 + L1MC4a LINE L1 5683 5923 -414 1384 178 7 18 chr5 159732540 159732816 -39897334 + L1MB7 LINE L1 5896 6168 -16 263 217 9 38 chr5 159733036 159733142 -39897008 + A-rich Low_complexity Low_complexity 4 106 0 474 333 160 25 chr5 159733413 159734008 -39896142 + L1MC4 LINE L1 4498 5172 -974 213 39 0 0 chr5 159734488 159734514 -39895636 + (GA)n Simple_repeat Simple_repeat 1 26 0 192 179 0 0 chr5 159734514 159734553 -39895597 + (CATA)n Simple_repeat Simple_repeat 2 40 0 612 301 63 53 chr5 159735093 159735824 -39894326 + HAL1b LINE L1 116 853 -495 1576 175 124 50 chr5 159735845 159736330 -39893820 - Charlie1b DNA MER1_type -1 522 2 854 313 76 38 chr5 159736693 159737301 -39892849 + L1M1 LINE L1 3650 4280 -3285 1320 123 0 0 chr5 159737301 159737480 -39892670 - AluSg/x SINE Alu -22 288 110 2189 105 0 10 chr5 159737497 159737792 -39892358 - AluSx SINE Alu -20 292 1 303 307 54 31 chr5 159737794 159738218 -39891932 + L1M1 LINE L1 4811 5244 -2321 329 258 31 0 chr5 159738334 159738431 -39891719 - MLT1F LTR MaLR -428 114 15 2201 241 32 8 chr5 159738460 159739086 -39891064 + L1MC4 LINE L1 5254 5894 -1914 817 233 216 34 chr5 159739122 159739582 -39890568 + L1MC4 LINE L1 7301 7869 -173 222 105 0 0 chr5 159739582 159739620 -39890530 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 817 233 216 34 chr5 159739620 159739682 -39890468 + L1MC4 LINE L1 7869 7918 -124 202 57 94 0 chr5 159739685 159739738 -39890412 + (TA)n Simple_repeat Simple_repeat 1 58 0 1612 209 4 0 chr5 159739738 159740016 -39890134 - AluJb SINE Alu -33 279 1 225 344 30 43 chr5 159740199 159740429 -39889721 + L1ME LINE L1 5378 5604 -562 1391 181 65 73 chr5 159740442 159740812 -39889338 - MER67D LTR ERV1 -3 511 145 1537 162 78 37 chr5 159740873 159741169 -39888981 + AluJb SINE Alu 5 312 0 360 176 0 0 chr5 159741173 159741241 -39888909 + GA-rich Low_complexity Low_complexity 2 69 0 785 126 0 15 chr5 159741372 159741507 -39888643 - MER67D LTR ERV1 -381 133 1 227 215 15 0 chr5 159741533 159741598 -39888552 + (TAGA)n Simple_repeat Simple_repeat 2 67 0 231 283 18 53 chr5 159741602 159741715 -39888435 + L1P4 LINE L1 5683 5791 -375 234 205 0 0 chr5 159741887 159741926 -39888224 - MLT1I LTR MaLR -222 187 149 3800 78 88 40 chr5 159741943 159742523 -39887627 - LTR14B LTR ERVK 0 608 1 294 289 0 0 chr5 159742611 159742715 -39887435 - HERVKC4 LTR ERVK -69 5193 5090 * 452 316 11 6 chr5 159742714 159742891 -39887259 - HERVK3 LTR ERVK -655 6588 6411 266 98 255 0 chr5 159743212 159743263 -39886887 - HERVK3 LTR ERVK -7025 218 155 755 83 19 0 chr5 159744070 159744178 -39885972 - HERVK3 LTR ERVK -5734 211 102 1561 91 0 0 chr5 159744556 159744775 -39885375 - HERVK3 LTR ERVK -5726 219 1 3356 73 152 13 chr5 159744775 159745309 -39884841 - LTR14B LTR ERVK 0 608 1 447 278 0 16 chr5 159745312 159745438 -39884712 - MLT1I LTR MaLR -285 124 1 2358 141 32 64 chr5 159745661 159746163 -39883987 + LTR19A LTR ERV1 1 486 0 259 359 77 0 chr5 159746487 159746604 -39883546 + MIR SINE MIR 21 146 -62 846 226 5 42 chr5 159747436 159747653 -39882497 + MER3 DNA MER1_type 1 209 0 1423 149 4 61 chr5 159748044 159748305 -39881845 + AluJo SINE Alu 51 296 -16 1283 210 111 28 chr5 159748792 159749145 -39881005 + MLT1D LTR MaLR 1 382 -123 1071 146 0 30 chr5 159749145 159749309 -39880841 - FRAM SINE Alu -17 159 1 663 122 65 24 chr5 159749316 159749439 -39880711 + MLT1D LTR MaLR 378 505 0 457 251 190 6 chr5 159749701 159749864 -39880286 - MIR SINE MIR -4 258 66 2240 118 0 0 chr5 159749994 159750291 -39879859 + AluSg SINE Alu 1 297 -13 242 188 82 24 chr5 159750326 159750411 -39879739 - LTR33 LTR ERVL 0 521 432 431 248 66 7 chr5 159750701 159750838 -39879312 + MIR SINE MIR 69 213 -49 220 204 19 0 chr5 159751373 159751427 -39878723 - MIR SINE MIR -129 133 79 260 326 0 11 chr5 159752041 159752130 -39878020 + GA-rich Low_complexity Low_complexity 3 90 0 284 353 64 27 chr5 159752188 159752375 -39877775 - L2 LINE L2 -87 3185 2992 1929 208 112 49 chr5 159752424 159753020 -39877130 + L1MDa LINE L1 74 707 -5833 6603 188 79 24 chr5 159753023 159754253 -39875897 + L1MDa LINE L1 746 1907 -4633 2095 131 0 3 chr5 159754253 159754550 -39875600 + AluSg SINE Alu 1 296 -14 6603 188 79 24 chr5 159754550 159755295 -39874855 + L1MDa LINE L1 1907 2865 -3675 495 0 0 0 chr5 159755295 159755350 -39874800 + (TA)n Simple_repeat Simple_repeat 2 56 0 6603 188 79 24 chr5 159755350 159755605 -39874545 + L1MDa LINE L1 2865 3104 -3436 540 96 63 0 chr5 159755611 159755818 -39874332 + (TA)n Simple_repeat Simple_repeat 1 220 0 325 220 0 90 chr5 159755822 159755922 -39874228 - L1MC4 LINE L1 -1339 6703 6613 402 158 34 23 chr5 159755931 159756108 -39874042 + (TA)n Simple_repeat Simple_repeat 2 180 0 532 142 59 3 chr5 159756137 159756462 -39873688 + (TA)n Simple_repeat Simple_repeat 1 343 0 63 14 0 0 chr5 159756465 159756535 -39873615 + AT_rich Low_complexity Low_complexity 1 70 0 437 173 60 0 chr5 159756535 159756703 -39873447 + (TA)n Simple_repeat Simple_repeat 1 178 0 22 0 0 0 chr5 159756703 159756725 -39873425 + AT_rich Low_complexity Low_complexity 1 22 0 1257 217 72 21 chr5 159756860 159757247 -39872903 + L1MC4a LINE L1 7173 7579 -229 391 238 86 43 chr5 159757242 159757452 -39872698 + L1MC4 LINE L1 7685 7903 -139 * 241 192 0 0 chr5 159757456 159757508 -39872642 + L1MC4 LINE L1 7991 8042 0 236 214 72 21 chr5 159757680 159757785 -39872365 - MLT1E2 LTR MaLR 0 654 353 * 822 230 100 65 chr5 159757776 159758146 -39872004 - MLT1E2 LTR MaLR -243 383 1 263 324 46 37 chr5 159758314 159758422 -39871728 + L2 LINE L2 3164 3272 0 250 282 117 53 chr5 159758844 159759110 -39871040 - L1ME4a LINE L1 -40 6081 5799 252 354 18 35 chr5 159759568 159759681 -39870469 + MIR SINE MIR 52 139 -69 193 293 0 81 chr5 159759659 159759758 -39870392 - MIR SINE MIR 0 262 172 * 1501 205 0 48 chr5 159760086 159760398 -39869752 - AluJo SINE Alu -15 297 1 261 302 129 36 chr5 159760545 159760684 -39869466 - MIR SINE MIR -93 169 18 317 315 0 0 chr5 159761011 159761100 -39869050 - L1MC4 LINE L1 -1339 6703 6615 264 30 0 0 chr5 159761241 159761274 -39868876 + (CA)n Simple_repeat Simple_repeat 2 34 0 4517 151 20 9 chr5 159761451 159761569 -39868581 + L1MA6 LINE L1 5497 5612 -688 1646 166 85 18 chr5 159761569 159761852 -39868298 + AluSx SINE Alu 1 302 -10 4517 151 20 9 chr5 159761852 159762519 -39867631 + L1MA6 LINE L1 5612 6291 -9 2414 230 61 26 chr5 159762553 159762990 -39867160 + L1ME1 LINE L1 5021 5441 -725 2407 81 3 0 chr5 159762990 159763287 -39866863 - AluSp SINE Alu -15 298 1 2414 230 61 26 chr5 159763287 159763593 -39866557 + L1ME1 LINE L1 5441 5735 -431 2156 142 88 32 chr5 159763593 159764002 -39866148 - MSTB1 LTR MaLR 0 432 1 2414 230 61 26 chr5 159764002 159764306 -39865844 + L1ME1 LINE L1 5735 6105 -61 2178 106 0 26 chr5 159765219 159765522 -39864628 - AluY SINE Alu -16 295 1 1768 129 35 46 chr5 159766191 159766539 -39863611 - MLT2A1 LTR ERVL 0 444 101 3062 69 32 5 chr5 159766542 159766977 -39863173 - HERVL-A1 LTR ERVL -19 5635 5189 14271 49 1 8 chr5 159767077 159769012 -39861138 - L1P LINE L1 -2181 3965 2045 23391 74 9 1 chr5 159769282 159772388 -39857762 + HERVL LTR ERVL 1674 4803 -851 24456 135 17 13 chr5 159772495 159773616 -39856534 + L1PA8A LINE L1 1076 2191 -4255 2141 132 3 3 chr5 159773616 159773919 -39856231 + AluSq SINE Alu 1 303 -10 24456 135 17 13 chr5 159773919 159778143 -39852007 + L1PA8A LINE L1 2191 6444 -2 332 285 65 16 chr5 159778144 159778267 -39851883 + L1M4 LINE L1 3475 3603 -2543 6509 72 8 5 chr5 159778435 159779581 -39850569 + L1PA8A LINE L1 4973 6129 -2 332 285 65 16 chr5 159779582 159779705 -39850445 + L1M4 LINE L1 3475 3603 -2543 833 261 84 4 chr5 159779705 159779931 -39850219 - MIR SINE MIR -15 247 4 185 297 0 0 chr5 159780984 159781021 -39849129 - MIR SINE MIR -21 241 205 2395 88 0 0 chr5 159781175 159781470 -39848680 + AluSq SINE Alu 1 295 -18 543 195 40 92 chr5 159783306 159783480 -39846670 + MER5B DNA MER1_type 14 178 0 8015 119 42 2 chr5 159784134 159785381 -39844769 + HSMAR2 DNA Mariner 4 1301 -1 192 189 27 0 chr5 159785445 159785482 -39844668 + L2 LINE L2 3226 3263 -9 251 344 11 11 chr5 159787042 159787132 -39843018 + MER5A DNA MER1_type 98 187 -2 724 130 0 89 chr5 159787349 159787495 -39842655 + FLAM_C SINE Alu 1 133 0 362 256 124 7 chr5 159787737 159787874 -39842276 + Charlie8 DNA MER1_type 1 153 -2264 712 272 12 0 chr5 159788071 159788233 -39841917 - MER5B DNA MER1_type -14 164 1 2416 95 0 7 chr5 159788664 159788970 -39841180 - AluSg SINE Alu -6 304 1 489 335 41 18 chr5 159789151 159789369 -39840781 - MIR SINE MIR 0 262 40 188 287 93 62 chr5 159789391 159789520 -39840630 - MIR SINE MIR -65 197 65 25 0 0 0 chr5 159790149 159790174 -39839976 + AT_rich Low_complexity Low_complexity 1 25 0 787 222 101 0 chr5 159791259 159791457 -39838693 - MER58A DNA MER1_type -5 219 2 1275 181 0 14 chr5 159792007 159792228 -39837922 + AluJb SINE Alu 84 301 -11 984 171 34 0 chr5 159792595 159792771 -39837379 + MER5A DNA MER1_type 7 188 -1 219 154 58 39 chr5 159793027 159793079 -39837071 - L2 LINE L2 -8 3264 3212 2112 113 0 53 chr5 159793465 159793783 -39836367 + AluSg SINE Alu 1 301 -9 334 204 45 76 chr5 159794012 159794144 -39836006 - MER117 DNA MER1_type -18 179 52 206 311 27 0 chr5 159794898 159794972 -39835178 - MIR SINE MIR -110 152 77 777 259 15 15 chr5 159795161 159795358 -39834792 + LTR16A LTR ERVL 120 316 -134 451 269 28 14 chr5 159795469 159795610 -39834540 - MIR SINE MIR -75 187 45 289 328 30 22 chr5 159795921 159796055 -39834095 - MER5B DNA MER1_type -38 140 6 301 226 24 36 chr5 159796352 159796436 -39833714 + MIR SINE MIR 24 106 -102 2525 178 110 69 chr5 159796643 159797437 -39832713 + LTR1B LTR ERV1 1 826 0 2439 89 0 0 chr5 159797614 159797918 -39832232 + AluSc SINE Alu 1 304 -5 382 238 188 0 chr5 159798038 159798139 -39832011 - L2 LINE L2 -7 3306 3187 1682 170 58 0 chr5 159799590 159799919 -39830231 + Tigger3(Golem) DNA MER2_type 1 348 -2681 1360 160 64 32 chr5 159799934 159800184 -39829966 + AluJo SINE Alu 34 291 -21 4894 131 15 20 chr5 159800185 159801072 -39829078 + Tigger3b DNA MER2_type 341 1222 -9 2242 112 3 3 chr5 159801242 159801547 -39828603 + AluSp SINE Alu 1 305 -8 344 295 238 5 chr5 159801787 159801997 -39828153 - MIR SINE MIR -3 259 1 1371 208 106 19 chr5 159802056 159802416 -39827734 - MSTD LTR MaLR -5 391 1 190 234 43 0 chr5 159802820 159802867 -39827283 - L3b LINE CR1 -4 1579 1531 218 321 143 7 chr5 159803154 159803294 -39826856 - L3 LINE CR1 -56 1521 1363 656 271 79 10 chr5 159803789 159803995 -39826155 - MIR SINE MIR -13 249 30 190 242 132 44 chr5 159804027 159804118 -39826032 + MIR SINE MIR 110 208 -54 2019 152 0 0 chr5 159804627 159804924 -39825226 + AluSx SINE Alu 1 297 -15 2835 166 35 4 chr5 159805732 159806239 -39823911 + Tigger7 DNA MER2_type 4 526 -1961 564 141 11 0 chr5 159806232 159806324 -39823826 + Tigger7 DNA MER2_type 2399 2491 0 * 919 178 0 35 chr5 159806871 159807040 -39823110 - FRAM SINE Alu -3 163 1 466 241 71 43 chr5 159807074 159807215 -39822935 + MIR SINE MIR 8 152 -110 2662 210 120 48 chr5 159807215 159808208 -39821942 + MER52C LTR ERV1 1 1213 -65 1661 187 26 26 chr5 159808229 159808576 -39821574 + MER52A LTR ERV1 1409 1755 0 227 261 0 130 chr5 159808576 159808691 -39821459 + MIR SINE MIR 152 251 -11 269 200 0 0 chr5 159808831 159808881 -39821269 - L2 LINE L2 -1 3312 3263 584 259 131 12 chr5 159808983 159809303 -39820847 + L1ME4a LINE L1 5635 5992 -129 264 316 189 19 chr5 159809324 159809536 -39820614 - MIR SINE MIR -3 259 12 482 67 0 0 chr5 159809630 159809690 -39820460 + FLAM SINE Alu 63 122 -21 1963 100 59 0 chr5 159809700 159809971 -39820179 + AluSq SINE Alu 1 287 -26 733 226 70 5 chr5 159809975 159810161 -39819989 - MIR SINE MIR 0 262 65 21 0 0 0 chr5 159810216 159810237 -39819913 + AT_rich Low_complexity Low_complexity 1 21 0 426 129 0 48 chr5 159811218 159811342 -39818808 + (TA)n Simple_repeat Simple_repeat 1 118 0 353 135 10 125 chr5 159811347 159811451 -39818699 - L1MC4 LINE L1 -1339 6703 6612 896 267 53 32 chr5 159811944 159812191 -39817959 + MIR SINE MIR 11 262 0 26 50 0 0 chr5 159812341 159812381 -39817769 + AT_rich Low_complexity Low_complexity 1 40 0 303 303 132 20 chr5 159812544 159812696 -39817454 - MIR3 SINE MIR -7 201 33 1482 171 0 9 chr5 159813673 159813901 -39816249 + AluSx SINE Alu 5 230 -82 252 86 0 0 chr5 159813903 159813938 -39816212 + (A)n Simple_repeat Simple_repeat 1 35 0 180 219 0 0 chr5 159813952 159813984 -39816166 - MIR SINE MIR -168 94 63 322 292 6 101 chr5 159814384 159814552 -39815598 - MER5A DNA MER1_type -22 167 16 538 288 110 14 chr5 159815428 159815709 -39814441 + L2 LINE L2 3005 3312 -1 238 348 97 31 chr5 159815904 159816131 -39814019 + L2 LINE L2 2653 2894 -420 329 194 42 0 chr5 159816760 159816832 -39813318 - MER116 DNA Mariner -5 75 1 203 263 0 18 chr5 159818149 159818206 -39811944 + CT-rich Low_complexity Low_complexity 4 59 0 851 140 34 84 chr5 159818225 159818403 -39811747 - AluJb SINE Alu -10 302 134 237 222 19 0 chr5 159818789 159818843 -39811307 + L2 LINE L2 3255 3309 -4 360 0 0 0 chr5 159819143 159819183 -39810967 + (TG)n Simple_repeat Simple_repeat 2 41 0 2261 105 23 3 chr5 159819195 159819500 -39810650 - AluSx SINE Alu -1 311 1 301 280 112 0 chr5 159819528 159819635 -39810515 - L1ME4a LINE L1 -12 6109 5991 347 277 8 0 chr5 159819733 159819852 -39810298 - L1ME4a LINE L1 -369 5752 5633 22 0 0 0 chr5 159820121 159820143 -39810007 + AT_rich Low_complexity Low_complexity 1 22 0 771 244 106 43 chr5 159820152 159820643 -39809507 - L1MC5 LINE L1 -44 7917 7396 1007 262 55 47 chr5 159820739 159821353 -39808797 - L1MC5 LINE L1 -899 6909 6414 28 71 0 0 chr5 159821555 159821611 -39808539 + AT_rich Low_complexity Low_complexity 1 56 0 273 57 0 0 chr5 159821850 159821885 -39808265 + (TG)n Simple_repeat Simple_repeat 2 36 0 1981 98 14 30 chr5 159821915 159822210 -39807940 - AluSg SINE Alu -20 290 1 1965 168 0 0 chr5 159823033 159823331 -39806819 - AluJo SINE Alu -14 298 1 851 281 56 84 chr5 159823770 159824268 -39805882 - L2 LINE L2 -1 3312 2829 314 310 49 16 chr5 159824384 159824629 -39805521 + L1ME4a LINE L1 4877 5129 -1017 422 328 67 23 chr5 159824720 159825196 -39804954 + L1ME4a LINE L1 5326 5822 -299 324 256 80 7 chr5 159825308 159825445 -39804705 + L1ME4a LINE L1 5974 6120 -1 423 359 36 6 chr5 159827443 159827610 -39802540 + MIR3 SINE MIR 6 177 -31 186 292 56 0 chr5 159827694 159827766 -39802384 - L2 LINE L2 -92 3221 3146 766 186 0 0 chr5 159827855 159827984 -39802166 - FLAM_C SINE Alu -4 129 1 365 248 54 23 chr5 159828665 159828794 -39801356 - MIR SINE MIR 0 262 130 211 241 58 131 chr5 159828784 159828887 -39801263 - MIR SINE MIR -26 236 144 * 12367 142 11 1 chr5 159828887 159831755 -39798395 - L1PA11 LINE L1 -10 6164 3280 211 241 58 131 chr5 159831755 159831788 -39798362 - MIR SINE MIR -118 144 110 1556 159 60 47 chr5 159831796 159832161 -39797989 + THE1C LTR MaLR 6 375 0 301 301 0 0 chr5 159832195 159832268 -39797882 - MIR SINE MIR -184 78 6 333 361 52 22 chr5 159833216 159833446 -39796704 - L2 LINE L2 -348 2966 2730 301 346 19 9 chr5 159835252 159835359 -39794791 - MIR SINE MIR -118 144 37 488 316 78 26 chr5 159835369 159835600 -39794550 + MIR SINE MIR 7 249 -13 186 376 50 20 chr5 159836461 159836562 -39793588 - L2 LINE L2 -57 3215 3112 1563 272 30 10 chr5 159836672 159837267 -39792883 - L1M3c LINE L1 -4599 2438 1832 1013 184 53 4 chr5 159837403 159837648 -39792502 - L1MA4 LINE L1 -22 6278 6022 595 204 14 14 chr5 159837659 159837806 -39792344 - L1M3c LINE L1 -6874 156 10 2146 184 19 5 chr5 159837819 159838242 -39791908 + L1MB7 LINE L1 5748 6176 -8 211 357 114 62 chr5 159838252 159838524 -39791626 - L2 LINE L2 -173 3099 2814 1893 183 15 0 chr5 159839338 159839676 -39790474 - MER2 DNA MER2_type -1 343 1 1678 209 29 67 chr5 159839898 159840419 -39789731 - MLT1D LTR MaLR 0 505 5 3602 76 2 2 chr5 159840525 159841011 -39789139 + L1PA8 LINE L1 5685 6170 -2 314 228 119 20 chr5 159841811 159841912 -39788238 - MIR SINE MIR 0 262 152 4084 174 47 36 chr5 159841923 159842332 -39787818 - MER4D LTR ERV1 -5 898 495 2345 103 0 3 chr5 159842332 159842644 -39787506 - AluY SINE Alu 0 311 1 4084 174 47 36 chr5 159842644 159843121 -39787029 - MER4D LTR ERV1 -408 495 2 337 314 12 0 chr5 159843121 159843207 -39786943 - MIR SINE MIR -139 123 37 224 195 0 0 chr5 159843320 159843361 -39786789 - L2 LINE L2 0 3313 3273 * 1217 284 79 22 chr5 159843346 159843796 -39786354 - L2 LINE L2 -353 2919 2447 1984 139 166 7 chr5 159844064 159844467 -39785683 + MLT1C LTR MaLR 1 467 0 287 226 0 0 chr5 159844548 159844601 -39785549 + L2 LINE L2 3250 3302 -11 1575 143 98 50 chr5 159846446 159846667 -39783483 - THE1C LTR MaLR 0 375 166 2077 141 0 0 chr5 159846667 159846950 -39783200 + AluSx SINE Alu 1 283 -29 414 0 0 0 chr5 159846950 159846996 -39783154 + (CAAAC)n Simple_repeat Simple_repeat 2 47 0 1575 143 98 50 chr5 159846996 159847131 -39783019 - THE1C LTR MaLR -208 167 1 307 267 116 0 chr5 159847359 159847445 -39782705 - L1ME4a LINE L1 -18 6103 6008 2254 123 0 0 chr5 159847445 159847782 -39782368 - AluSx SINE Alu 0 337 1 470 288 210 48 chr5 159848253 159848733 -39781417 + MLT1K LTR MaLR 24 581 -7 1684 84 0 36 chr5 159849223 159849472 -39780678 + L1P3 LINE L1 1 240 -6221 488 303 137 31 chr5 159849598 159850106 -39780044 - L2 LINE L2 -16 3297 2738 1552 216 36 5 chr5 159850286 159850701 -39779449 - L1MA9 LINE L1 -30 6282 5856 326 333 50 35 chr5 159850711 159850852 -39779298 + MIR3 SINE MIR 19 161 -47 959 280 167 16 chr5 159850853 159851349 -39778801 - MLT1K LTR MaLR 0 588 18 741 193 42 6 chr5 159852253 159852419 -39777731 - L1MB7 LINE L1 -21 6163 5992 414 301 81 0 chr5 159853927 159854050 -39776100 - L2 LINE L2 -3 3269 3137 2169 116 86 0 chr5 159854087 159854424 -39775726 + MER47A DNA MER2_type 1 366 0 237 132 0 0 chr5 159854464 159854502 -39775648 + (TTC)n Simple_repeat Simple_repeat 2 39 0 376 295 79 29 chr5 159854940 159855068 -39775082 - L1MC4a LINE L1 -1965 5843 5723 2410 63 3 3 chr5 159855068 159855367 -39774783 - AluY SINE Alu -12 299 1 376 295 79 29 chr5 159855367 159855516 -39774634 - L1MC4a LINE L1 -2085 5723 5552 282 284 199 6 chr5 159856102 159856278 -39773872 - MIR SINE MIR -43 219 10 713 230 143 19 chr5 159856477 159856686 -39773464 + MIR SINE MIR 3 237 -25 380 335 126 47 chr5 159857177 159858018 -39772132 - L2 LINE L2 -4 3309 2395 2114 119 36 3 chr5 159858132 159858434 -39771716 - AluSx SINE Alu 0 312 1 203 261 22 0 chr5 159858900 159858946 -39771204 + L2 LINE L2 3251 3297 -16 300 346 22 38 chr5 159858981 159859166 -39770984 - MER5A DNA MER1_type -7 182 1 235 335 254 20 chr5 159859987 159860596 -39769554 + L2 LINE L2 1992 2743 -571 392 273 23 31 chr5 159860816 159860944 -39769206 - MIR SINE MIR -94 168 42 379 273 128 0 chr5 159862292 159862464 -39767686 + LTR33 LTR ERVL 54 247 -274 605 206 50 7 chr5 159862531 159862672 -39767478 + LTR33 LTR ERVL 375 521 0 2012 78 0 0 chr5 159862899 159863181 -39766969 - AluSg SINE Alu 0 320 39 900 182 19 0 chr5 159863766 159863925 -39766225 - AluJo SINE Alu -30 282 121 352 325 25 8 chr5 159863989 159864109 -39766041 + L2 LINE L2 2816 2937 -377 575 199 96 0 chr5 159864109 159864255 -39765895 - L1MC4 LINE L1 -1424 6618 6459 2163 82 0 54 chr5 159864525 159864842 -39765308 - AluY SINE Alu -10 301 2 470 337 90 60 chr5 159865006 159865705 -39764445 - L2 LINE L2 0 3272 2550 578 249 101 0 chr5 159867272 159867441 -39762709 - MIR SINE MIR -1 261 76 25 0 0 0 chr5 159869437 159869462 -39760688 + AT_rich Low_complexity Low_complexity 1 25 0 265 197 0 0 chr5 159869839 159869900 -39760250 - L1M LINE L1 -868 5316 5256 1881 165 3 0 chr5 159869945 159870236 -39759914 - AluJb SINE Alu -18 294 3 1226 199 39 5 chr5 159870238 159870562 -39759588 + MER54A LTR ERVL 12 417 -484 339 201 5 0 chr5 159870574 159870652 -39759498 + MER54A LTR ERVL 711 900 -1 236 283 0 0 chr5 159871094 159871154 -39758996 + L2 LINE L2 3251 3310 -3 2708 149 27 2 chr5 159871315 159871798 -39758352 - L1MC1 LINE L1 -19 6314 5820 366 169 90 0 chr5 159871798 159871887 -39758263 - L1MC1 LINE L1 -851 5493 5397 342 274 0 0 chr5 159872030 159872114 -39758036 + MIR SINE MIR 70 153 -109 650 309 179 18 chr5 159872492 159873046 -39757104 - L3 LINE CR1 -509 1068 426 39 38 0 0 chr5 159873633 159873686 -39756464 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr5 159873749 159873770 -39756380 + AT_rich Low_complexity Low_complexity 1 21 0 23 86 0 0 chr5 159873977 159874035 -39756115 + AT_rich Low_complexity Low_complexity 1 58 0 3497 53 40 0 chr5 159874258 159874731 -39755419 + PABL_B LTR ERV1 1 492 -175 2475 150 56 17 chr5 159876035 159876515 -39753635 + L1MC1 LINE L1 5431 5929 -404 1161 203 115 0 chr5 159876517 159876838 -39753312 + L1MC1 LINE L1 5976 6333 0 199 190 207 17 chr5 159876838 159876896 -39753254 + MIR SINE MIR 183 251 -11 292 237 154 32 chr5 159876966 159877122 -39753028 - L1ME LINE L1 -455 5666 5492 216 390 39 32 chr5 159877777 159877931 -39752219 + MIR3 SINE MIR 23 177 -31 4418 182 33 23 chr5 159878050 159879142 -39751008 + L1 LINE L1 4127 5229 -917 5415 169 20 32 chr5 159879243 159880328 -39749822 + L1P LINE L1 295 1366 -4780 2015 95 21 21 chr5 159880428 159880754 -39749396 - Tigger3b DNA MER2_type -565 666 341 1230 176 64 32 chr5 159880755 159881005 -39749145 - AluJo SINE Alu -21 291 34 1645 173 58 0 chr5 159881020 159881349 -39748801 - Tigger3b DNA MER2_type -883 348 1 278 179 89 98 chr5 159882634 159882757 -39747393 + MIR SINE MIR 122 243 -19 635 124 141 0 chr5 159883183 159883304 -39746846 - AluSp/q SINE Alu -1 312 175 503 222 0 28 chr5 159883721 159883865 -39746285 - MER50 LTR ERV1 -22 712 573 295 20 0 60 chr5 159884039 159884089 -39746061 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 1352 241 24 63 chr5 159884092 159884602 -39745548 - L1MEc LINE L1 -4927 1469 991 2303 103 0 3 chr5 159884602 159884914 -39745236 - AluSq SINE Alu -2 311 1 1352 241 24 63 chr5 159884914 159885084 -39745066 - L1MEc LINE L1 -5405 991 816 180 77 0 0 chr5 159885084 159885110 -39745040 + (TTA)n Simple_repeat Simple_repeat 3 28 0 2442 60 0 13 chr5 159885110 159885428 -39744722 - L1PA6 LINE L1 -18 6136 5823 1785 191 0 22 chr5 159886121 159886435 -39743715 + AluJb SINE Alu 1 307 -5 416 279 159 56 chr5 159886585 159886925 -39743225 + L2 LINE L2 2928 3302 -11 9174 54 13 12 chr5 159887152 159887334 -39742816 - L1P LINE L1 -1644 4502 4322 2360 80 0 29 chr5 159887334 159887647 -39742503 - AluY SINE Alu -7 304 1 9174 54 13 12 chr5 159887647 159888736 -39741414 - L1P LINE L1 -1824 4322 3230 674 254 162 16 chr5 159888948 159889263 -39740887 + MER57B LTR ERV1 74 434 0 204 328 35 0 chr5 159889390 159889448 -39740702 - L2 LINE L2 -45 3227 3168 839 266 37 14 chr5 159889453 159889671 -39740479 - MIR SINE MIR -6 256 34 475 193 0 0 chr5 159889942 159890025 -39740125 - AluJ/FLAM SINE Alu -229 83 1 213 241 150 38 chr5 159890401 159890534 -39739616 - L2 LINE L2 -808 2506 2359 307 341 54 6 chr5 159890589 159890756 -39739394 - MIR SINE MIR -68 194 20 679 142 0 252 chr5 159891176 159891493 -39738657 + L1MA7 LINE L1 3544 3780 -2366 5542 145 32 7 chr5 159891593 159892872 -39737278 + L1MA7 LINE L1 4916 6161 -130 279 0 0 0 chr5 159892872 159892903 -39737247 + (TG)n Simple_repeat Simple_repeat 2 32 0 * 297 0 0 0 chr5 159892902 159892935 -39737215 + (TA)n Simple_repeat Simple_repeat 1 33 0 5542 145 32 7 chr5 159892903 159892996 -39737154 + L1MA7 LINE L1 6161 6291 0 834 147 74 0 chr5 159893032 159893080 -39737070 + L1M3 LINE L1 5588 5631 -552 234 0 0 0 chr5 159893080 159893106 -39737044 + (TA)n Simple_repeat Simple_repeat 1 26 0 834 147 74 0 chr5 159893106 159893220 -39736930 + L1M3 LINE L1 5631 5762 -421 1222 132 56 21 chr5 159893221 159893487 -39736663 - THE1B LTR MaLR -7 357 56 1134 124 0 0 chr5 159893706 159893875 -39736275 + L1PA6 LINE L1 10 178 -6283 * 15149 98 7 17 chr5 159893864 159896235 -39733915 + L1PA6 LINE L1 1041 3386 -3075 16832 75 0 1 chr5 159896335 159899411 -39730739 + L1PA6 LINE L1 3369 6469 0 465 221 43 7 chr5 159899426 159899566 -39730584 + L1ME4a LINE L1 5962 6106 -15 990 129 0 0 chr5 159899837 159899976 -39730174 + AluJb SINE Alu 1 139 -173 1179 243 143 37 chr5 159900723 159901213 -39728937 + MLT1F LTR MaLR 1 542 0 216 0 0 0 chr5 159901638 159901662 -39728488 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1730 166 14 7 chr5 159902044 159902333 -39727817 - AluJb SINE Alu -16 296 6 670 161 45 26 chr5 159902345 159902500 -39727650 + MER106B DNA MER1_type 902 1059 0 6647 138 30 7 chr5 159903111 159905199 -39724951 + L1MA7 LINE L1 4091 6129 -162 189 0 0 0 chr5 159905199 159905220 -39724930 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 225 0 0 0 chr5 159905219 159905244 -39724906 + (TA)n Simple_repeat Simple_repeat 1 25 0 6647 138 30 7 chr5 159905220 159905305 -39724845 + L1MA7 LINE L1 6129 6291 0 903 129 74 0 chr5 159905341 159905389 -39724761 + L1MB3 LINE L1 5588 5631 -552 180 0 0 0 chr5 159905389 159905409 -39724741 + (TA)n Simple_repeat Simple_repeat 1 20 0 903 129 74 0 chr5 159905409 159905523 -39724627 + L1MB3 LINE L1 5631 5762 -421 1324 113 70 23 chr5 159905524 159905812 -39724338 - THE1B LTR MaLR -7 357 27 2471 145 20 7 chr5 159905812 159906259 -39723891 + L1MB3 LINE L1 5729 6181 -2 755 303 65 4 chr5 159906688 159906919 -39723231 + MIR SINE MIR 18 262 0 253 338 0 12 chr5 159907088 159907168 -39722982 + L2 LINE L2 3186 3264 -8 239 262 12 36 chr5 159907377 159907461 -39722689 - MIR SINE MIR -100 162 81 206 351 38 10 chr5 159908973 159909073 -39721077 + MIR SINE MIR 4 109 -114 * 274 266 16 0 chr5 159909071 159909135 -39721015 + L2 LINE L2 3207 3271 -1 884 192 62 22 chr5 159909379 159909603 -39720547 + MER58D DNA MER1_type 2 234 -152 515 245 70 0 chr5 159910476 159910619 -39719531 + MIR SINE MIR 110 262 0 618 321 16 5 chr5 159911298 159911485 -39718665 + MIR SINE MIR 74 262 0 525 290 64 61 chr5 159911670 159911998 -39718152 + L1M3d LINE L1 413 741 -5562 2854 191 28 75 chr5 159912177 159912925 -39717225 + L1M3d LINE L1 800 1452 -4851 4846 58 0 0 chr5 159912925 159913524 -39716626 + L1PA6 LINE L1 5547 6145 -9 2854 191 28 75 chr5 159913524 159913845 -39716305 + L1M3d LINE L1 1452 1787 -4516 327 349 83 15 chr5 159913878 159914010 -39716140 - L2 LINE L2 0 3272 3132 219 327 91 18 chr5 159914173 159914283 -39715867 - L2 LINE L2 -433 2881 2764 215 216 0 0 chr5 159914760 159914797 -39715353 + polypyrimidine Low_complexity Low_complexity 3 39 0 306 0 0 0 chr5 159914799 159914833 -39715317 + (CA)n Simple_repeat Simple_repeat 2 35 0 326 228 94 60 chr5 159915242 159915391 -39714759 - L3b LINE CR1 -102 1481 1328 309 183 0 0 chr5 159915463 159915523 -39714627 + (TGGA)n Simple_repeat Simple_repeat 3 62 0 187 318 75 9 chr5 159915775 159915882 -39714268 - L3b LINE CR1 -316 1267 1154 398 189 5 71 chr5 159916076 159916190 -39713960 - MIR SINE MIR -61 147 66 298 357 69 30 chr5 159916189 159916550 -39713600 + L2 LINE L2 2355 2729 -585 * 760 291 51 6 chr5 159916578 159916891 -39713259 - L1ME3A LINE L1 -293 5877 5551 423 340 120 10 chr5 159917955 159918164 -39711986 + MIR SINE MIR 24 255 -7 2049 121 0 4 chr5 159918741 159919021 -39711129 + AluSg SINE Alu 16 294 -16 590 293 65 20 chr5 159919030 159919276 -39710874 - MIR SINE MIR 0 262 6 182 369 19 10 chr5 159919936 159920039 -39710111 + MER5B DNA MER1_type 1 104 -74 6471 134 27 37 chr5 159920149 159921127 -39709023 - Tigger3b DNA MER2_type -1797 1231 266 2021 127 58 30 chr5 159921127 159921490 -39708660 + THE1C LTR MaLR 3 375 0 6471 134 27 37 chr5 159921490 159921737 -39708413 - Tigger3b DNA MER2_type -2762 266 18 328 291 0 0 chr5 159922278 159922357 -39707793 - L2 LINE L2 -2 3270 3192 1747 175 16 7 chr5 159923100 159923409 -39706741 + AluJo SINE Alu 1 312 0 1956 143 13 22 chr5 159923523 159923838 -39706312 - AluJb SINE Alu 0 312 1 338 167 0 0 chr5 159924023 159924083 -39706067 - AluS SINE Alu -243 60 1 611 296 59 0 chr5 159925202 159925388 -39704762 - MIR SINE MIR -7 255 59 1542 183 13 27 chr5 159925388 159925425 -39704725 - AluJo SINE Alu -4 308 272 2424 94 26 76 chr5 159925425 159925808 -39704342 - THE1B LTR MaLR 0 364 1 1542 183 13 27 chr5 159925808 159926070 -39704080 - AluJo SINE Alu -40 272 13 355 303 52 7 chr5 159926468 159926623 -39703527 + MLT1K LTR MaLR 81 242 -346 621 219 61 110 chr5 159926888 159927116 -39703034 + MIR SINE MIR 24 240 -22 326 269 0 13 chr5 159928177 159928255 -39701895 + MIR SINE MIR 34 110 -152 293 321 41 10 chr5 159928405 159928601 -39701549 + L1MC/D LINE L1 5549 5750 -2058 256 343 46 0 chr5 159929431 159929539 -39700611 + L1MC/D LINE L1 5441 5553 -2255 1228 237 38 15 chr5 159929614 159929956 -39700194 + MLT1A2 LTR MaLR 25 374 0 2104 178 40 4 chr5 159930008 159930464 -39699686 - L1MB7 LINE L1 -15 6169 5698 2637 102 3 3 chr5 159931445 159931809 -39698341 + THE1B LTR MaLR 1 364 0 750 98 131 0 chr5 159932695 159932817 -39697333 - AluSg/x SINE Alu 0 312 175 858 126 33 20 chr5 159933227 159933378 -39696772 - MER50 LTR ERV1 -23 711 559 577 210 7 35 chr5 159933437 159933580 -39696570 - MER50 LTR ERV1 -163 571 433 * 1160 99 6 11 chr5 159933569 159933751 -39696399 - MER50 LTR ERV1 -501 233 53 234 215 0 0 chr5 159933751 159933830 -39696320 + (TG)n Simple_repeat Simple_repeat 2 80 0 209 333 0 0 chr5 159933841 159933934 -39696216 + (TG)n Simple_repeat Simple_repeat 2 94 0 339 129 0 57 chr5 159933940 159934010 -39696140 - MER50 LTR ERV1 -668 66 1 359 240 194 8 chr5 159934413 159934542 -39695608 - MIR SINE MIR -70 192 40 916 230 98 0 chr5 159934898 159935102 -39695048 - MER58A DNA MER1_type 0 224 1 611 227 143 0 chr5 159935223 159935377 -39694773 + MIR SINE MIR 79 254 -8 434 332 45 36 chr5 159936017 159936240 -39693910 - MIR SINE MIR -8 254 30 206 176 0 0 chr5 159936319 159936353 -39693797 + L2 LINE L2 3265 3298 -15 440 333 40 0 chr5 159936432 159936582 -39693568 - MIR SINE MIR -47 215 60 185 372 29 22 chr5 159936653 159936790 -39693360 - MIR3 SINE MIR -36 172 35 351 0 0 0 chr5 159937015 159937054 -39693096 + (TG)n Simple_repeat Simple_repeat 1 39 0 548 301 0 0 chr5 159937142 159937265 -39692885 + L2 LINE L2 3190 3312 -1 203 194 0 0 chr5 159937474 159937510 -39692640 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2457 106 0 0 chr5 159937533 159937845 -39692305 + AluSx SINE Alu 1 312 0 1205 216 99 30 chr5 159940317 159940651 -39689499 + L1MC4a LINE L1 7453 7808 0 475 252 164 42 chr5 159940679 159940893 -39689257 + MIR SINE MIR 17 256 -6 21 0 0 0 chr5 159941261 159941282 -39688868 + AT_rich Low_complexity Low_complexity 1 21 0 1717 119 3 113 chr5 159941422 159941647 -39688503 - AluJb SINE Alu -6 306 130 225 0 0 0 chr5 159941647 159941672 -39688478 + (TGG)n Simple_repeat Simple_repeat 1 25 0 1717 119 3 113 chr5 159941672 159941790 -39688360 - AluJb SINE Alu -182 130 1 397 208 0 13 chr5 159941939 159942016 -39688134 - MIR SINE MIR -109 153 78 396 239 60 17 chr5 159942506 159942623 -39687527 - L2 LINE L2 0 3313 3192 255 224 10 71 chr5 159943525 159943618 -39686532 - MIR SINE MIR -54 208 122 295 250 440 0 chr5 159943618 159943734 -39686416 + MER91A DNA MER1_type 2 168 -28 216 277 21 0 chr5 159943791 159943838 -39686312 + MER91A DNA MER1_type 140 187 -9 * 223 333 24 24 chr5 159943834 159943918 -39686232 - MIR SINE MIR -98 110 27 520 226 83 42 chr5 159944261 159944429 -39685721 + MLT1H1 LTR MaLR 381 555 0 2181 118 6 13 chr5 159944554 159944867 -39685283 - AluSx SINE Alu -1 311 1 546 327 45 10 chr5 159944932 159945134 -39685016 + MIR SINE MIR 2 210 -52 266 0 29 0 chr5 159945151 159945185 -39684965 + (CACAC)n Simple_repeat Simple_repeat 1 35 0 317 309 65 62 chr5 159945202 159945509 -39684641 + L2 LINE L2 2985 3293 -20 273 321 48 0 chr5 159945901 159945985 -39684165 - L2 LINE L2 0 3313 3226 549 267 23 35 chr5 159946225 159946397 -39683753 - MIR3 SINE MIR -19 189 20 2408 148 31 14 chr5 159946572 159946997 -39683153 + LTR23 LTR ERV1 1 432 -5 788 173 6 36 chr5 159947001 159947178 -39682972 - MIR SINE MIR -42 220 52 24 0 0 0 chr5 159947635 159947659 -39682491 + GC_rich Low_complexity Low_complexity 1 24 0 183 261 62 0 chr5 159948507 159948572 -39681578 - L2 LINE L2 -222 3091 3023 691 322 125 28 chr5 159948582 159948797 -39681353 + L2 LINE L2 1067 1260 -2054 2373 77 3 0 chr5 159948797 159949095 -39681055 + AluSq SINE Alu 1 299 -14 691 322 125 28 chr5 159949095 159949336 -39680814 + L2 LINE L2 1260 1567 -1747 1127 172 67 131 chr5 159949339 159949657 -39680493 + MER63B DNA MER1_type 5 295 -767 1676 179 7 17 chr5 159949657 159949953 -39680197 + AluJo SINE Alu 1 293 -19 1127 172 67 131 chr5 159949953 159950023 -39680127 + MER63B DNA MER1_type 295 368 -68 1140 225 122 52 chr5 159950031 159950417 -39679733 + L2 LINE L2 1558 1970 -1344 207 0 0 0 chr5 159951231 159951254 -39678896 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 284 319 60 88 chr5 159951311 159951527 -39678623 + L2 LINE L2 3043 3252 -20 1129 280 59 35 chr5 159951786 159952324 -39677826 - L2 LINE L2 -147 3166 2624 3906 164 57 83 chr5 159952398 159953253 -39676897 + MER21A LTR ERV1 14 846 -85 387 193 6 0 chr5 159953437 159953513 -39676637 + AluJb SINE Alu 67 130 -172 363 145 40 40 chr5 159953507 159953583 -39676567 + MER21A LTR ERV1 850 925 -6 * 446 303 97 0 chr5 159953584 159953739 -39676411 - L2 LINE L2 -683 2631 2462 1534 190 135 35 chr5 159953810 159954096 -39676054 - MLT1C LTR MaLR -27 440 101 2163 161 42 26 chr5 159954096 159954480 -39675670 + MLT1B LTR MaLR 1 390 0 1534 190 135 35 chr5 159954480 159954593 -39675557 - MLT1C LTR MaLR -366 101 1 266 232 38 123 chr5 159954594 159954805 -39675345 + MLT1K LTR MaLR 394 586 -2 205 182 0 0 chr5 159954847 159954880 -39675270 + A-rich Low_complexity Low_complexity 2 34 0 204 40 0 0 chr5 159955329 159955354 -39674796 + (TAA)n Simple_repeat Simple_repeat 3 27 0 230 313 90 0 chr5 159955757 159955824 -39674326 - MIR SINE MIR -36 226 154 362 303 69 37 chr5 159955824 159956012 -39674138 - LTR16A1 LTR ERVL 0 457 264 353 232 0 0 chr5 159956134 159956203 -39673947 - MIR SINE MIR -105 157 89 180 0 0 0 chr5 159956557 159956577 -39673573 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1701 181 21 3 chr5 159956590 159956877 -39673273 + AluJb SINE Alu 4 295 -17 297 277 143 9 chr5 159958136 159958248 -39671902 + MLT1L LTR MaLR 140 266 -349 401 234 81 8 chr5 159958402 159958526 -39671624 + MLT1K LTR MaLR 454 586 -2 494 234 38 95 chr5 159958782 159958940 -39671210 - MIR SINE MIR 0 262 114 722 177 8 15 chr5 159959328 159959458 -39670692 - MLT2B2 LTR ERVL 0 515 387 365 109 36 0 chr5 159959456 159959511 -39670639 - MLT2B1 LTR ERVL -463 57 1 * 681 292 69 34 chr5 159959570 159959861 -39670289 - L2 LINE L2 -5 3308 3008 703 302 112 60 chr5 159959884 159960372 -39669778 + MLT1K LTR MaLR 14 534 -54 1313 214 130 32 chr5 159960372 159960742 -39669408 + MLT1I LTR MaLR 2 407 -2 703 302 112 60 chr5 159960742 159960800 -39669350 + MLT1K LTR MaLR 534 588 0 183 361 82 8 chr5 159960900 159961022 -39669128 - L2 LINE L2 -663 2651 2521 365 281 35 89 chr5 159961090 159961293 -39668857 + MIR3 SINE MIR 5 196 -12 1826 126 26 23 chr5 159961793 159962140 -39668010 + L1MA8 LINE L1 5695 6034 -134 1268 161 0 5 chr5 159962140 159962333 -39667817 + AluJb SINE Alu 93 284 -28 1699 118 8 4 chr5 159962342 159962597 -39667553 + L1MA8 LINE L1 6024 6279 -12 275 155 52 147 chr5 159963072 159963188 -39666962 - MER113 DNA MER1_type? -415 106 2 444 316 40 24 chr5 159963440 159963687 -39666463 + L1MC4 LINE L1 6756 7006 -1036 213 196 0 0 chr5 159963973 159964019 -39666131 + (CACCAT)n Simple_repeat Simple_repeat 5 50 0 2025 223 75 35 chr5 159965236 159965800 -39664350 - MLT1E LTR MaLR 0 593 8 512 250 50 0 chr5 159965898 159966018 -39664132 - L2 LINE L2 -11 3261 3136 239 330 54 9 chr5 159966101 159966213 -39663937 + L2 LINE L2 3137 3253 -19 226 382 41 8 chr5 159967854 159967977 -39662173 + L2 LINE L2 3146 3272 0 892 204 52 14 chr5 159968332 159968543 -39661607 + L2 LINE L2 2517 2735 -579 462 174 76 15 chr5 159968543 159968708 -39661442 - LTR33A LTR ERVL -5 518 289 535 305 36 39 chr5 159968995 159969278 -39660872 + L2 LINE L2 2759 3037 -276 24 0 0 0 chr5 159969285 159969309 -39660841 + AT_rich Low_complexity Low_complexity 1 24 0 2109 98 10 10 chr5 159969388 159969683 -39660467 - AluSq SINE Alu -18 295 1 223 200 40 27 chr5 159969704 159969779 -39660371 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 252 263 113 70 chr5 159969779 159969941 -39660209 + L2 LINE L2 3115 3287 -26 546 127 0 0 chr5 159969941 159970020 -39660130 + L1MB1 LINE L1 6087 6165 -3 252 263 113 70 chr5 159970020 159970043 -39660107 + L2 LINE L2 3287 3308 -5 273 300 29 50 chr5 159970245 159970385 -39659765 + L2 LINE L2 3164 3300 -13 2260 99 3 0 chr5 159970416 159970718 -39659432 + AluSx SINE Alu 1 303 -9 750 260 33 29 chr5 159972645 159972887 -39657263 - MIR SINE MIR -10 252 10 441 336 89 5 chr5 159973051 159973265 -39656885 + MIR SINE MIR 9 240 -22 254 313 138 44 chr5 159973754 159974051 -39656099 + L2 LINE L2 2908 3232 -40 646 248 66 35 chr5 159975118 159975336 -39654814 + MIR SINE MIR 39 261 -1 698 158 105 0 chr5 159976057 159976171 -39653979 - FLAM_C SINE Alu -7 126 1 441 299 130 59 chr5 159976278 159976739 -39653411 - L2 LINE L2 -7 3306 2813 1939 131 64 59 chr5 159976825 159977198 -39652952 + THE1C LTR MaLR 1 375 0 1523 226 92 97 chr5 159977780 159978241 -39651909 + Charlie7 DNA MER1_type 5 464 -2148 2018 137 6 10 chr5 159978241 159978554 -39651596 + AluSq SINE Alu 1 312 -1 1523 226 92 97 chr5 159978554 159978733 -39651417 + Charlie7 DNA MER1_type 464 642 -1970 202 352 48 19 chr5 159979353 159979458 -39650692 + L2 LINE L2 3188 3295 -18 739 289 32 16 chr5 159979534 159979780 -39650370 - MIR SINE MIR -12 250 1 321 281 62 0 chr5 159979808 159979954 -39650196 - L1ME4a LINE L1 -205 5916 5762 215 231 62 15 chr5 159980133 159980198 -39649952 + MIR SINE MIR 84 151 -111 198 374 114 16 chr5 159981093 159981339 -39648811 - L3b LINE CR1 -27 1556 1287 292 294 141 37 chr5 159981542 159981705 -39648445 + MIR SINE MIR 28 207 -55 24 0 0 0 chr5 159981783 159981807 -39648343 + AT_rich Low_complexity Low_complexity 1 24 0 360 296 40 108 chr5 159981889 159981954 -39648196 - MIR SINE MIR -10 252 184 2297 91 0 0 chr5 159981954 159982252 -39647898 - AluY SINE Alu -13 298 1 360 296 40 108 chr5 159982252 159982436 -39647714 - MIR SINE MIR -78 184 20 3435 131 4 13 chr5 159982458 159982985 -39647165 - L1MB3 LINE L1 -8 6175 5654 943 148 7 0 chr5 159983341 159983483 -39646667 + FRAM SINE Alu 22 164 -12 227 289 13 0 chr5 159983623 159983699 -39646451 + MIR SINE MIR 186 262 0 257 383 11 40 chr5 159983742 159983917 -39646233 + MIR SINE MIR 21 190 -72 535 251 87 69 chr5 159985749 159985980 -39644170 - MIR SINE MIR 0 262 28 2372 92 0 19 chr5 159986585 159986900 -39643250 - AluSc SINE Alu 0 309 1 539 309 97 46 chr5 159987174 159987588 -39642562 + L2 LINE L2 2836 3270 -2 2117 124 7 7 chr5 159987666 159987965 -39642185 + AluSc SINE Alu 1 299 -10 1741 167 3 20 chr5 159988281 159988574 -39641576 + AluJo SINE Alu 1 288 -24 17008 71 13 4 chr5 159989259 159991534 -39638616 - L1P LINE L1 -2354 3792 1498 356 249 136 19 chr5 159991965 159992119 -39638031 - MIR SINE MIR -28 180 2 666 297 22 9 chr5 159992701 159992923 -39637227 + L1MC/D LINE L1 5576 5800 -2008 244 297 40 0 chr5 159993084 159993158 -39636992 - Charlie8 DNA MER1_type -2156 261 185 843 176 73 0 chr5 159993490 159993655 -39636495 + MER5A DNA MER1_type 6 182 -7 302 230 108 0 chr5 159993657 159993731 -39636419 - MER5A DNA MER1_type -102 87 6 210 91 0 0 chr5 159994216 159994249 -39635901 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 486 353 73 49 chr5 159994261 159994669 -39635481 - L2 LINE L2 -25 3247 2830 249 259 185 31 chr5 159995575 159995737 -39634413 + MIR SINE MIR 28 214 -48 1958 189 64 3 chr5 159995737 159996081 -39634069 - MLT1A1 LTR MaLR 0 365 1 305 316 93 52 chr5 159996223 159996402 -39633748 + MIR SINE MIR 15 201 -61 793 179 95 0 chr5 159996402 159996570 -39633580 - MER5A DNA MER1_type 0 189 6 197 325 50 0 chr5 159997616 159997696 -39632454 + MIR SINE MIR 124 207 -55 216 303 172 8 chr5 159998656 159998778 -39631372 + MIR SINE MIR 22 163 -99 2251 111 0 0 chr5 159998966 159999264 -39630886 + AluSc SINE Alu 1 298 -11 271 302 112 0 chr5 159999453 159999569 -39630581 + L2 LINE L2 3138 3266 -6 303 297 46 52 chr5 160000217 160000383 -39629767 - MIR SINE MIR -64 144 17 330 299 159 21 chr5 160001102 160001293 -39628857 - MIR SINE MIR -6 256 42 266 319 104 28 chr5 160001513 160001657 -39628493 - MER5A DNA MER1_type 0 189 35 2232 133 0 0 chr5 160001917 160002225 -39627925 - AluSx SINE Alu -4 308 1 236 250 0 0 chr5 160002683 160002727 -39627423 + L2 LINE L2 3219 3262 -10 26 0 0 0 chr5 160002755 160002781 -39627369 + AT_rich Low_complexity Low_complexity 1 26 0 766 144 14 82 chr5 160002794 160002940 -39627210 + AluJb SINE Alu 1 136 -176 1186 188 55 12 chr5 160003341 160003596 -39626554 + L1MD3 LINE L1 7730 7995 0 787 254 113 72 chr5 160003609 160004228 -39625922 + L2 LINE L2 2664 3312 -1 336 290 61 91 chr5 160004234 160004465 -39625685 + L2 LINE L2 3026 3249 -23 1778 166 0 27 chr5 160004517 160004812 -39625338 - AluJo SINE Alu -25 287 1 494 164 97 45 chr5 160005418 160005552 -39624598 + L1MA9 LINE L1 6162 6302 -10 282 309 0 0 chr5 160005635 160005719 -39624431 + MIR SINE MIR 64 147 -115 198 0 0 0 chr5 160005759 160005781 -39624369 + (CA)n Simple_repeat Simple_repeat 2 23 0 254 323 182 10 chr5 160005832 160006024 -39624126 + L2 LINE L2 3055 3279 -34 554 269 163 38 chr5 160006919 160007239 -39622911 - L2 LINE L2 -21 3292 2933 233 277 134 17 chr5 160007317 160007436 -39622714 + MIR SINE MIR 66 198 -64 873 281 33 12 chr5 160007438 160007680 -39622470 - MIR SINE MIR 0 262 16 218 250 0 0 chr5 160007872 160007912 -39622238 - MIR SINE MIR -139 69 30 1513 235 118 66 chr5 160008605 160009080 -39621070 + L2 LINE L2 2235 2684 -629 2134 125 0 0 chr5 160009080 160009375 -39620775 - AluSx SINE Alu -17 295 1 1513 235 118 66 chr5 160009375 160009940 -39620210 + L2 LINE L2 2684 3313 0 1029 271 69 76 chr5 160009976 160010515 -39619635 - MLT1K LTR MaLR -5 583 49 445 353 41 14 chr5 160010534 160010752 -39619398 + L2 LINE L2 2687 2910 -404 195 129 0 0 chr5 160010752 160010783 -39619367 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 181 143 0 0 chr5 160010791 160010819 -39619331 - MIR SINE MIR -10 252 225 341 335 126 18 chr5 160011270 160011437 -39618713 - MIR SINE MIR -44 218 34 365 271 112 45 chr5 160011538 160011936 -39618214 + MLT1G1 LTR MaLR 100 549 0 277 274 117 56 chr5 160012161 160012340 -39617810 - MIR3 SINE MIR -2 206 17 329 342 13 13 chr5 160012931 160013083 -39617067 - MIR3 SINE MIR -6 202 51 280 172 16 62 chr5 160013418 160013482 -39616668 - MIR SINE MIR -139 123 63 622 292 32 40 chr5 160013642 160013892 -39616258 + MIR SINE MIR 15 262 0 1731 161 7 43 chr5 160014221 160014526 -39615624 + AluJo SINE Alu 1 294 -18 951 271 91 46 chr5 160014550 160015214 -39614936 + L2 LINE L2 2403 3313 0 11373 191 34 18 chr5 160015307 160016145 -39614005 - L1PA16 LINE L1 0 6166 5343 2532 108 131 8 chr5 160016145 160016526 -39613624 - MSTA LTR MaLR 0 428 1 11373 191 34 18 chr5 160016526 160019285 -39610865 - L1PA16 LINE L1 -823 5343 2508 7790 33 0 0 chr5 160019287 160019336 -39610814 - L1PA4 LINE L1 -2 6153 6105 360 0 0 0 chr5 160019336 160019376 -39610774 + (TATG)n Simple_repeat Simple_repeat 3 42 0 7790 33 0 0 chr5 160019376 160020476 -39609674 - L1PA4 LINE L1 -49 6106 5007 * 15148 46 0 1 chr5 160020473 160023007 -39607143 + L1PA6 LINE L1 3611 6154 0 490 197 72 40 chr5 160023022 160023174 -39606976 + L1ME4a LINE L1 5962 6118 -3 1660 144 37 19 chr5 160023433 160023704 -39606446 + AluJb SINE Alu 1 276 -36 359 259 161 0 chr5 160023713 160023856 -39606294 + L1MC4 LINE L1 7264 7429 -613 513 254 146 52 chr5 160023938 160024549 -39605601 + L1MC5 LINE L1 7270 7937 -24 351 98 0 0 chr5 160024908 160024969 -39605181 + (TG)n Simple_repeat Simple_repeat 2 62 0 607 170 0 0 chr5 160025410 160025510 -39604640 + MER103 DNA DNA 15 114 -52 249 265 216 29 chr5 160025745 160025847 -39604303 - MIR SINE MIR -134 128 8 1740 181 34 5 chr5 160026503 160026884 -39603266 - Charlie5 DNA MER1_type 0 2624 2233 1144 171 14 23 chr5 160026915 160027132 -39603018 - AluJo SINE Alu -11 301 87 379 221 23 0 chr5 160027133 160027219 -39602931 - Charlie5 DNA MER1_type -2520 92 5 1826 233 126 44 chr5 160027227 160027948 -39602202 + MER20B DNA MER1_type 5 784 0 196 339 61 17 chr5 160028086 160028201 -39601949 - L2 LINE L2 -8 3305 3186 1289 104 0 71 chr5 160028690 160028714 -39601436 + L1PB1 LINE L1 5950 5974 -177 1944 76 58 40 chr5 160028714 160029069 -39601081 + AluSx SINE Alu 1 360 0 1289 104 0 71 chr5 160029069 160029254 -39600896 + L1PB1 LINE L1 5974 6145 -6 2201 118 0 0 chr5 160029372 160029701 -39600449 + L1PA15-16 LINE L1 1664 1992 -4857 * 2229 114 0 11 chr5 160029699 160029902 -39600248 + L1PA15-16 LINE L1 1942 2141 -4708 1927 162 3 13 chr5 160029902 160030211 -39599939 - AluSx SINE Alu -5 307 2 2229 114 0 11 chr5 160030211 160030357 -39599793 + L1PA15-16 LINE L1 2141 2287 -4562 2161 206 14 15 chr5 160030357 160030969 -39599181 + L1PA15-16 LINE L1 2603 3220 -3629 43888 54 2 1 chr5 160030970 160036412 -39593738 + L1P2 LINE L1 1 5448 -707 8085 26 1 2 chr5 160036578 160037477 -39592673 + L1PA4 LINE L1 5254 6151 -4 747 243 172 46 chr5 160037489 160037763 -39592387 - L1ME4a LINE L1 -22 6099 5861 225 0 0 0 chr5 160037763 160037788 -39592362 + (TA)n Simple_repeat Simple_repeat 2 26 0 747 243 172 46 chr5 160037788 160037966 -39592184 - L1ME4a LINE L1 -260 5861 5590 678 224 10 58 chr5 160037981 160038186 -39591964 - L1MD3 LINE L1 -11 7984 7790 1190 233 129 8 chr5 160038526 160038624 -39591526 - MER113 DNA MER1_type? -78 443 358 203 0 37 0 chr5 160038624 160038651 -39591499 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 2089 129 0 0 chr5 160038658 160038937 -39591213 - AluSx SINE Alu -22 290 12 1190 233 129 8 chr5 160038937 160039225 -39590925 - MER113 DNA MER1_type? -168 353 1 569 299 0 46 chr5 160039385 160039579 -39590571 - MIR SINE MIR -49 213 29 2060 159 0 0 chr5 160039586 160039895 -39590255 - AluJb SINE Alu -3 309 1 560 309 43 104 chr5 160041128 160041729 -39588421 - L2 LINE L2 -7 3265 2703 298 321 22 8 chr5 160045917 160046051 -39584099 + MIR SINE MIR 80 215 -47 959 255 8 23 chr5 160046841 160047100 -39583050 + MIR SINE MIR 4 258 -4 649 169 5 155 chr5 160048123 160048336 -39581814 + MIR SINE MIR 74 254 -8 567 268 83 35 chr5 160048474 160048702 -39581448 + L1ME1 LINE L1 5928 6166 0 306 0 0 0 chr5 160048892 160048926 -39581224 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 1350 143 57 35 chr5 160049281 160049511 -39580639 + MER46A DNA MER2_type 2 236 0 767 143 169 32 chr5 160049537 160049590 -39580560 - FRAM SINE Alu -138 174 130 180 0 0 0 chr5 160049590 160049610 -39580540 + (CAGTG)n Simple_repeat Simple_repeat 1 20 0 767 143 169 32 chr5 160049610 160049710 -39580440 - FRAM SINE Alu -182 130 1 330 255 141 27 chr5 160049796 160049945 -39580205 + MER103 DNA DNA 1 166 0 302 228 110 48 chr5 160050293 160050438 -39579712 - MER104 DNA Tc2 -9 171 18 349 157 0 29 chr5 160050440 160050510 -39579640 + L1ME2 LINE L1 5895 5962 -202 240 233 53 15 chr5 160050531 160050618 -39579532 + L1ME2 LINE L1 6073 6161 -5 281 152 0 0 chr5 160051353 160051399 -39578751 - L2 LINE L2 -7 3265 3220 1203 161 0 0 chr5 160052160 160052353 -39577797 - L1MB3 LINE L1 -2 6181 5989 201 160 20 0 chr5 160052353 160052398 -39577752 + (TA)n Simple_repeat Simple_repeat 2 47 0 586 249 69 6 chr5 160052548 160052721 -39577429 + MIR SINE MIR 75 258 -4 283 277 58 44 chr5 160052789 160052926 -39577224 + MIR SINE MIR 124 262 0 351 254 68 8 chr5 160053272 160053390 -39576760 - MIR SINE MIR -11 251 127 349 292 123 8 chr5 160054044 160054174 -39575976 + L2 LINE L2 3169 3313 0 342 259 111 31 chr5 160055843 160056005 -39574145 - MIR SINE MIR -1 261 87 21 36 0 0 chr5 160056826 160056854 -39573296 + AT_rich Low_complexity Low_complexity 1 28 0 246 311 11 0 chr5 160056866 160056956 -39573194 - MIR SINE MIR -4 258 168 259 311 54 77 chr5 160057242 160057464 -39572686 - L3 LINE CR1 -11 1566 1350 581 282 128 8 chr5 160057616 160057850 -39572300 + MIR SINE MIR 1 262 0 373 287 139 0 chr5 160058287 160058416 -39571734 - L2 LINE L2 0 3313 3167 1071 269 44 3 chr5 160058427 160058725 -39571425 - LTR16C LTR ERVL -2 489 180 216 0 0 0 chr5 160058872 160058896 -39571254 + (CA)n Simple_repeat Simple_repeat 1 24 0 383 319 54 36 chr5 160058954 160059230 -39570920 - L2 LINE L2 -217 3096 2816 2101 113 25 148 chr5 160059247 160059303 -39570847 - MSTA LTR MaLR 0 428 367 6906 88 15 3 chr5 160059303 160060446 -39569704 - L1PA14 LINE L1 -3 6158 5009 2101 113 25 148 chr5 160060446 160060877 -39569273 - MSTA LTR MaLR -61 367 1 2437 126 9 0 chr5 160060978 160061320 -39568830 + L1PA16 LINE L1 5820 6164 -2 387 255 102 64 chr5 160061762 160061919 -39568231 - MER5A DNA MER1_type -18 171 9 2191 126 7 0 chr5 160062013 160062323 -39567827 - AluSx SINE Alu 0 312 1 223 318 154 67 chr5 160063017 160063212 -39566938 - L2 LINE L2 -613 2701 2490 562 203 89 38 chr5 160063273 160063431 -39566719 - MIR SINE MIR -74 188 23 2351 112 0 0 chr5 160063578 160063890 -39566260 + AluSq SINE Alu 1 312 -1 301 246 228 0 chr5 160063898 160064012 -39566138 + MIR SINE MIR 47 186 -76 466 320 30 20 chr5 160064305 160064508 -39565642 - MIR3 SINE MIR 0 208 4 336 262 87 0 chr5 160064973 160065076 -39565074 - L1ME LINE L1 -442 5679 5568 454 245 20 0 chr5 160065079 160065181 -39564969 - MLT1K LTR MaLR 0 588 485 239 298 137 48 chr5 160065181 160065203 -39564947 - LTR67 LTR ERVL 0 557 423 402 21 0 0 chr5 160065353 160065363 -39564787 + (TG)n Simple_repeat Simple_repeat 1 57 0 402 21 0 0 chr5 160065363 160065410 -39564740 + (TG)n Simple_repeat Simple_repeat 2 48 0 385 198 35 12 chr5 160065450 160065536 -39564614 - LTR67 LTR ERVL -74 483 396 601 280 30 67 chr5 160066178 160066514 -39563636 + L1ME4a LINE L1 5444 5760 -361 1003 142 0 0 chr5 160066719 160066874 -39563276 + L1MB2 LINE L1 6015 6169 -2 448 226 57 57 chr5 160066900 160067059 -39563091 + L1ME4a LINE L1 5941 6099 -22 281 306 122 10 chr5 160067909 160068007 -39562143 - L2 LINE L2 -1 3271 3163 1714 177 14 3 chr5 160068068 160068362 -39561788 + AluJb SINE Alu 1 297 -15 267 372 58 17 chr5 160068459 160068631 -39561519 - L2 LINE L2 -345 2969 2791 828 287 33 78 chr5 160068634 160068993 -39561157 - MLT1I LTR MaLR 0 409 67 273 295 215 12 chr5 160069068 160069319 -39560831 - L2 LINE L2 -560 2754 2453 344 336 127 0 chr5 160070444 160070554 -39559596 + L2 LINE L2 2579 2702 -612 2921 183 19 14 chr5 160070564 160071137 -39559013 - L1ME1 LINE L1 -19 6147 5572 520 314 92 44 chr5 160071137 160071587 -39558563 + L2 LINE L2 2688 3169 -144 210 320 93 0 chr5 160071587 160071662 -39558488 + MIR SINE MIR 72 153 -109 16716 45 9 0 chr5 160071805 160074518 -39555632 - L1PA5 LINE L1 0 6154 3424 442 228 13 13 chr5 160074760 160074860 -39555290 - MER63 DNA MER1_type 0 1060 737 487 205 16 47 chr5 160076135 160076262 -39553888 - MIR SINE MIR -62 200 78 687 236 112 6 chr5 160076466 160076627 -39553523 - MER45A DNA AcHobo 0 178 1 257 257 0 43 chr5 160076649 160076719 -39553431 + MIR SINE MIR 187 253 -9 210 37 0 0 chr5 160077377 160077404 -39552746 + (CA)n Simple_repeat Simple_repeat 1 27 0 199 292 0 0 chr5 160077965 160078013 -39552137 + L2 LINE L2 3206 3253 -19 240 358 0 0 chr5 160078125 160078192 -39551958 - L2 LINE L2 -2 3270 3204 506 182 9 0 chr5 160078262 160078372 -39551778 + (TAGA)n Simple_repeat Simple_repeat 4 114 0 289 343 90 18 chr5 160078446 160078612 -39551538 - MIR SINE MIR -84 178 1 219 338 0 0 chr5 160079435 160079515 -39550635 + C-rich Low_complexity Low_complexity 2 81 0 277 313 135 12 chr5 160079564 160079727 -39550423 + L2 LINE L2 2471 2653 -661 258 314 88 15 chr5 160079858 160079995 -39550155 - MIR SINE MIR -15 247 101 6022 138 44 34 chr5 160080022 160082049 -39548101 - L1PB3 LINE L1 0 6154 4125 195 253 107 27 chr5 160082049 160082124 -39548026 - MIR SINE MIR -147 115 35 210 297 16 16 chr5 160082297 160082361 -39547789 + L2 LINE L2 3207 3270 -2 1507 222 76 71 chr5 160083974 160084130 -39546020 - L1MC5 LINE L1 -36 7925 7771 1622 153 8 0 chr5 160084130 160084384 -39545766 - AluSx SINE Alu -14 298 43 1507 222 76 71 chr5 160084384 160084512 -39545638 - L1MC5 LINE L1 -190 7771 7645 2020 107 7 7 chr5 160084512 160084793 -39545357 + AluSx SINE Alu 1 281 -31 315 0 0 0 chr5 160084795 160084830 -39545320 + (CA)n Simple_repeat Simple_repeat 2 36 0 1507 222 76 71 chr5 160084830 160085105 -39545045 - L1MC5 LINE L1 -316 7645 7356 2104 148 0 0 chr5 160085105 160085415 -39544735 - AluSx SINE Alu -2 310 1 1507 222 76 71 chr5 160085415 160085511 -39544639 - L1MC5 LINE L1 -605 7356 7262 4069 182 65 19 chr5 160085533 160086758 -39543392 - L1MB7 LINE L1 -54 6130 4853 276 139 0 0 chr5 160086898 160086941 -39543209 - L1MC5 LINE L1 -764 7197 7155 199 321 151 19 chr5 160087395 160087554 -39542596 + L3b LINE CR1 1203 1382 -201 279 310 27 20 chr5 160087669 160087807 -39542343 + MIR SINE MIR 9 149 -63 285 309 49 0 chr5 160088270 160088351 -39541799 + MIR SINE MIR 60 144 -64 670 295 28 28 chr5 160088601 160088852 -39541298 + MIR SINE MIR 2 252 -10 458 280 104 46 chr5 160089342 160089649 -39540501 - L2 LINE L2 -7 3306 2982 441 0 0 0 chr5 160090070 160090119 -39540031 + (CA)n Simple_repeat Simple_repeat 2 50 0 412 298 22 51 chr5 160090264 160090383 -39539767 + MIR SINE MIR 85 199 -63 820 187 81 38 chr5 160090383 160090592 -39539558 - MER20 DNA MER1_type -1 218 1 412 298 22 51 chr5 160090592 160090650 -39539500 + MIR SINE MIR 199 257 -5 351 277 62 31 chr5 160091094 160091224 -39538926 - MIR3 SINE MIR -65 143 10 404 287 16 8 chr5 160091275 160091397 -39538753 + MER117 DNA MER1_type 73 195 -2 186 239 22 0 chr5 160092197 160092243 -39537907 - L2 LINE L2 -5 3267 3221 1219 209 47 64 chr5 160092562 160092906 -39537244 + MER58B DNA MER1_type 4 341 0 316 231 102 56 chr5 160093159 160093267 -39536883 + L2 LINE L2 3160 3272 0 192 167 28 0 chr5 160094058 160094094 -39536056 + L2 LINE L2 3180 3216 -97 558 272 40 64 chr5 160094891 160095141 -39535009 + MIR SINE MIR 16 259 -3 2547 74 3 0 chr5 160095367 160095679 -39534471 - AluSp SINE Alu 0 313 1 225 167 185 0 chr5 160095909 160095963 -39534187 - L2 LINE L2 -8 3264 3201 2157 138 3 0 chr5 160096734 160097031 -39533119 + AluSx SINE Alu 1 298 -14 21 57 0 0 chr5 160097247 160097282 -39532868 + AT_rich Low_complexity Low_complexity 1 35 0 431 278 0 38 chr5 160097380 160097513 -39532637 - MIR SINE MIR -127 135 8 229 286 13 26 chr5 160097809 160097886 -39532264 + L2 LINE L2 3194 3269 -3 739 151 24 24 chr5 160098184 160098310 -39531840 + FLAM_A SINE Alu 2 127 -6 2209 122 0 0 chr5 160098322 160098618 -39531532 + AluSx SINE Alu 1 296 -16 651 295 46 4 chr5 160099025 160099262 -39530888 - MIR SINE MIR 0 262 16 4386 269 71 23 chr5 160099547 160101941 -39528209 + L1ME3A LINE L1 3446 5951 -219 24 32 0 0 chr5 160102236 160102267 -39527883 + AT_rich Low_complexity Low_complexity 1 31 0 213 182 0 23 chr5 160103055 160103099 -39527051 + MIR SINE MIR 110 152 -110 282 287 11 23 chr5 160103308 160103395 -39526755 + L2 LINE L2 3197 3282 -31 2049 143 10 3 chr5 160103560 160103868 -39526282 + AluJb SINE Alu 1 310 -2 697 240 25 40 chr5 160104265 160104465 -39525685 - MIR SINE MIR -3 259 63 3674 202 52 31 chr5 160105381 160106049 -39524101 - L1ME1 LINE L1 -5 6161 5469 2222 97 0 0 chr5 160106049 160106328 -39523822 - AluSg SINE Alu -1 309 31 3674 202 52 31 chr5 160106328 160106527 -39523623 - L1ME1 LINE L1 -697 5469 5276 216 286 6 65 chr5 160106544 160106712 -39523438 + CT-rich Low_complexity Low_complexity 5 162 0 3722 173 13 0 chr5 160107233 160107904 -39522246 - L1MB7 LINE L1 -17 6167 5488 328 322 11 11 chr5 160108500 160108587 -39521563 - L2 LINE L2 -43 3229 3143 1735 183 24 0 chr5 160108677 160108966 -39521184 - AluJb SINE Alu -16 296 1 216 0 0 0 chr5 160109064 160109088 -39521062 + (TG)n Simple_repeat Simple_repeat 2 25 0 415 313 140 0 chr5 160109107 160109321 -39520829 + MIR SINE MIR 19 262 0 1927 155 0 7 chr5 160109940 160110237 -39519913 + AluJo SINE Alu 1 295 -17 1037 101 0 7 chr5 160110725 160110863 -39519287 - AluSq/x SINE Alu -173 140 4 220 283 170 9 chr5 160111353 160111459 -39518691 - MIR SINE MIR -50 212 90 469 279 115 10 chr5 160111928 160112136 -39518014 + L3 LINE CR1 1020 1249 -328 1705 276 132 22 chr5 160112500 160112864 -39517286 - L2 LINE L2 0 3313 2990 1649 143 0 0 chr5 160112864 160113095 -39517055 + AluSq SINE Alu 3 233 -80 1705 276 132 22 chr5 160113095 160113790 -39516360 - L2 LINE L2 -323 2990 2136 586 212 59 18 chr5 160113790 160113960 -39516190 - L2 LINE L2 -2687 627 451 300 159 0 0 chr5 160114086 160114130 -39516020 + MER94 DNA DNA 2 45 -89 201 133 0 0 chr5 160116260 160116290 -39513860 + (CTG)n Simple_repeat Simple_repeat 3 32 0 468 274 177 9 chr5 160117144 160117359 -39512791 + MIR SINE MIR 4 254 -8 409 244 81 12 chr5 160119309 160119469 -39510681 + MIR SINE MIR 89 259 -3 1468 186 4 12 chr5 160119578 160119830 -39510320 + AluJb SINE Alu 12 261 -51 345 75 0 0 chr5 160119838 160119891 -39510259 + (TC)n Simple_repeat Simple_repeat 2 54 0 189 107 0 0 chr5 160120777 160120805 -39509345 + (A)n Simple_repeat Simple_repeat 1 28 0 495 279 43 12 chr5 160120881 160121042 -39509108 - MIR SINE MIR 0 262 97 203 220 20 20 chr5 160121286 160121336 -39508814 + CT-rich Low_complexity Low_complexity 1 50 0 297 75 0 0 chr5 160121441 160121481 -39508669 + (TG)n Simple_repeat Simple_repeat 2 41 0 213 94 0 0 chr5 160121525 160121557 -39508593 + (CA)n Simple_repeat Simple_repeat 2 33 0 590 284 36 24 chr5 160122386 160122613 -39507537 + MIR SINE MIR 6 234 -28 292 141 14 28 chr5 160122885 160122956 -39507194 + (CACCAT)n Simple_repeat Simple_repeat 4 73 0 582 281 76 17 chr5 160123002 160123240 -39506910 - MIR SINE MIR -5 257 6 692 245 99 43 chr5 160123584 160123866 -39506284 - MER102a DNA MER1_type -32 298 1 188 278 113 61 chr5 160124050 160124165 -39505985 + L2 LINE L2 2964 3084 -188 2252 130 0 0 chr5 160125483 160125790 -39504360 + AluSx SINE Alu 1 307 -5 261 333 20 20 chr5 160125998 160126151 -39503999 + GA-rich Low_complexity Low_complexity 3 155 0 1105 109 0 16 chr5 160126449 160126557 -39503593 + (GAAA)n Simple_repeat Simple_repeat 1 286 0 1105 109 0 16 chr5 160126557 160126740 -39503410 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 750 169 23 0 chr5 160127707 160127837 -39502313 - AluJo SINE Alu -178 134 2 374 325 145 10 chr5 160127838 160128038 -39502112 - MIR SINE MIR -8 254 28 519 249 72 28 chr5 160128188 160128369 -39501781 + MIR SINE MIR 66 254 -8 239 302 23 12 chr5 160129412 160129498 -39500652 - MER5A DNA MER1_type -66 123 37 231 282 28 0 chr5 160129443 160129514 -39500636 + MER5A DNA MER1_type 109 181 -8 * 225 0 0 0 chr5 160131372 160131397 -39498753 + (CTG)n Simple_repeat Simple_repeat 2 26 0 1924 161 0 3 chr5 160131454 160131759 -39498391 - AluJb SINE Alu -8 304 1 269 325 0 0 chr5 160131763 160131871 -39498279 - MIR SINE MIR -70 138 54 533 260 181 3 chr5 160131906 160132121 -39498029 - MIR SINE MIR 0 262 14 415 300 26 81 chr5 160133536 160133809 -39496341 + MIR SINE MIR 3 260 -2 540 259 40 19 chr5 160133967 160134150 -39496000 + MIR SINE MIR 9 191 -63 2275 100 7 0 chr5 160134277 160134568 -39495582 + AluSg SINE Alu 1 293 -17 625 279 63 13 chr5 160134653 160134890 -39495260 + MIR SINE MIR 14 262 0 187 200 83 0 chr5 160134897 160134957 -39495193 - MIR SINE MIR -56 206 142 658 274 130 26 chr5 160135551 160135858 -39494292 - L2 LINE L2 -9 3304 2966 1866 29 0 0 chr5 160135922 160136127 -39494023 - AluY SINE Alu -9 302 98 228 35 0 0 chr5 160136464 160136493 -39493657 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 243 133 0 0 chr5 160136659 160136704 -39493446 + (TC)n Simple_repeat Simple_repeat 1 45 0 451 310 45 0 chr5 160136718 160136873 -39493277 + MIR SINE MIR 7 168 -94 743 234 39 62 chr5 160137131 160137387 -39492763 - MIR SINE MIR 0 262 13 1602 123 119 15 chr5 160137425 160137693 -39492457 + AluSg1 SINE Alu 12 307 -2 1950 185 105 36 chr5 160139283 160139808 -39490342 - L1MC4 LINE L1 0 8042 7482 1749 192 102 25 chr5 160139831 160140263 -39489887 + L1MC4 LINE L1 7010 7474 -568 2309 88 0 0 chr5 160142689 160142983 -39487167 - AluY SINE Alu -17 294 1 729 200 142 0 chr5 160144007 160144197 -39485953 + MIR SINE MIR 16 232 -30 431 196 47 0 chr5 160144199 160144306 -39485844 + MER113 DNA MER1_type? 2 113 -408 260 211 0 67 chr5 160144355 160144406 -39485744 + MER113 DNA MER1_type? 125 169 -352 1861 159 24 0 chr5 160144406 160144695 -39485455 + AluSx SINE Alu 1 296 -16 260 211 0 67 chr5 160144695 160144733 -39485417 + MER113 DNA MER1_type? 169 208 -313 566 299 89 31 chr5 160144734 160144958 -39485192 - MIR SINE MIR -3 259 23 1520 207 98 59 chr5 160145001 160145441 -39484709 - MLT1C LTR MaLR -9 458 2 470 246 142 33 chr5 160145446 160145657 -39484493 + MER113 DNA MER1_type? 263 496 -25 1917 114 85 4 chr5 160145810 160146091 -39484059 + AluSx SINE Alu 1 304 -8 22 0 0 0 chr5 160146740 160146762 -39483388 + AT_rich Low_complexity Low_complexity 1 22 0 881 129 0 0 chr5 160147021 160147145 -39483005 + AluSq/x SINE Alu 1 124 -188 2840 7 0 0 chr5 160147910 160148214 -39481936 - AluYa5 SINE Alu -7 304 1 244 231 0 0 chr5 160148586 160148638 -39481512 - Charlie4 DNA MER1_type -1909 52 1 246 231 28 56 chr5 160148754 160148773 -39481377 - L1MA10 LINE L1 -1 6333 6315 2556 215 52 20 chr5 160148773 160149386 -39480764 - L1ME2 LINE L1 -9 6155 5523 991 127 0 51 chr5 160149418 160149575 -39480575 - AluJ SINE Alu -26 286 138 2139 128 60 80 chr5 160149575 160150012 -39480138 - MSTA LTR MaLR 0 428 1 682 176 88 24 chr5 160150022 160150147 -39480003 - AluJ SINE Alu -169 133 1 528 177 3 0 chr5 160150148 160150250 -39479900 - L1ME2 LINE L1 -636 5528 5425 1095 226 57 12 chr5 160151238 160151486 -39478664 - MIR SINE MIR -1 261 3 2287 105 3 0 chr5 160151617 160151923 -39478227 - AluSx SINE Alu -5 307 1 795 279 72 50 chr5 160152069 160152137 -39478013 + L1ME3A LINE L1 5214 5279 -891 1964 134 7 3 chr5 160152137 160152460 -39477690 + AluSx SINE Alu 1 324 0 795 279 72 50 chr5 160152460 160152656 -39477494 + L1ME3A LINE L1 5279 5469 -701 2278 95 0 3 chr5 160152656 160152952 -39477198 + AluSq SINE Alu 1 295 -18 795 279 72 50 chr5 160152952 160153376 -39476774 + L1ME3A LINE L1 5469 5926 -244 1620 164 7 22 chr5 160153426 160153700 -39476450 + AluJo SINE Alu 27 296 -16 184 276 17 0 chr5 160154009 160154067 -39476083 + L3 LINE CR1 1299 1357 -220 1115 222 31 35 chr5 160154067 160154420 -39475730 + L1ME4a LINE L1 5459 5809 -357 2371 87 13 0 chr5 160154421 160154721 -39475429 - AluSg SINE Alu -6 304 1 458 245 101 38 chr5 160154828 160155065 -39475085 + L1ME4a LINE L1 5863 6114 -7 385 339 12 24 chr5 160155276 160155441 -39474709 + L3 LINE CR1 1412 1574 -3 298 287 99 0 chr5 160155496 160155597 -39474553 - L2 LINE L2 -6 3307 3197 353 275 223 40 chr5 160155722 160155943 -39474207 + L2 LINE L2 2897 3076 -237 255 22 22 43 chr5 160155943 160155989 -39474161 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 1990 103 15 7 chr5 160155993 160156266 -39473884 - AluSx SINE Alu -37 275 1 353 275 223 40 chr5 160156266 160156385 -39473765 + L2 LINE L2 3078 3305 -8 1663 165 66 29 chr5 160157855 160158273 -39471877 - MLT1C LTR MaLR 0 467 6 488 314 93 12 chr5 160158354 160158526 -39471624 - MIR SINE MIR -74 188 3 1281 250 143 21 chr5 160159250 160159811 -39470339 - L1ME4a LINE L1 -3 6118 5490 254 295 201 7 chr5 160160438 160160587 -39469563 + MIR SINE MIR 2 179 -83 2323 101 3 0 chr5 160161269 160161567 -39468583 + AluSg SINE Alu 5 303 -7 332 351 18 0 chr5 160161839 160161953 -39468197 + MER5A DNA MER1_type 53 168 -21 22 0 0 0 chr5 160162539 160162561 -39467589 + AT_rich Low_complexity Low_complexity 1 22 0 1083 239 88 51 chr5 160162652 160162802 -39467348 + MLT1B LTR MaLR 4 147 -243 2086 142 10 0 chr5 160162802 160163105 -39467045 + AluJb SINE Alu 1 306 -6 1083 239 88 51 chr5 160163105 160163327 -39466823 + MLT1B LTR MaLR 147 390 0 205 367 39 8 chr5 160163364 160163492 -39466658 + L2 LINE L2 3171 3302 -11 1520 126 0 13 chr5 160163929 160164159 -39465991 - AluJo SINE Alu 0 312 86 414 219 101 25 chr5 160164956 160165048 -39465102 + AluJo/FLAM SINE Alu 1 105 -197 2155 132 3 0 chr5 160165048 160165344 -39464806 - AluSq SINE Alu -16 297 1 414 219 101 25 chr5 160165344 160165370 -39464780 + AluJo/FLAM SINE Alu 105 128 -174 646 214 9 0 chr5 160165379 160165491 -39464659 + MER81 DNA DNA 2 114 0 489 233 45 30 chr5 160167267 160167400 -39462750 + L2 LINE L2 3176 3310 -3 225 0 0 0 chr5 160167464 160167489 -39462661 + (A)n Simple_repeat Simple_repeat 1 25 0 273 249 48 37 chr5 160167642 160167896 -39462254 + L1MC5 LINE L1 7082 7340 -702 787 141 154 7 chr5 160168052 160168201 -39461949 + MSTA LTR MaLR 253 423 -5 2252 122 3 3 chr5 160168201 160168513 -39461637 + AluSx SINE Alu 1 312 0 227 253 190 0 chr5 160168723 160168802 -39461348 + MIR SINE MIR 43 136 -72 * 275 170 0 38 chr5 160168800 160168853 -39461297 + L2 LINE L2 2884 2934 -379 844 188 19 56 chr5 160168879 160169116 -39461034 + L1MC/D LINE L1 5587 5817 -425 205 220 20 20 chr5 160169116 160169166 -39460984 + GA-rich Low_complexity Low_complexity 3 52 0 2575 62 0 7 chr5 160169166 160169475 -39460675 - AluY SINE Alu -3 308 2 1192 168 86 47 chr5 160169496 160169728 -39460422 - AluJo SINE Alu -71 241 1 1182 149 0 6 chr5 160169873 160170047 -39460103 + AluJb SINE Alu 129 301 -11 2619 231 110 66 chr5 160170086 160170741 -39459409 + L1MC4 LINE L1 6306 6931 -1111 1901 172 0 6 chr5 160170741 160171055 -39459095 + AluSx SINE Alu 1 312 0 2619 231 110 66 chr5 160171055 160171235 -39458915 + L1MC4 LINE L1 6931 7102 -940 2112 173 37 0 chr5 160171235 160171587 -39458563 - MLT1A1 LTR MaLR 0 365 1 2619 231 110 66 chr5 160171587 160172171 -39457979 + L1MC4 LINE L1 7102 7905 -137 1180 245 36 17 chr5 160172174 160172566 -39457584 + L1MD3 LINE L1 7638 7995 0 344 231 56 35 chr5 160172576 160172719 -39457431 + L1M4 LINE L1 2249 2394 -3752 2082 76 0 40 chr5 160172720 160172853 -39457297 + AluSg SINE Alu 1 119 -191 1121 67 60 7 chr5 160172853 160173027 -39457123 + L1PA2 LINE L1 5996 6155 0 2082 76 0 40 chr5 160173027 160173170 -39456980 + AluSg SINE Alu 119 266 -44 664 272 86 3 chr5 160173172 160173496 -39456654 + L1M4 LINE L1 2394 2744 -3402 726 281 67 13 chr5 160174345 160174583 -39455567 - MIR SINE MIR -10 252 2 192 40 0 0 chr5 160174944 160174969 -39455181 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2147 111 4 0 chr5 160174969 160175249 -39454901 - AluSq SINE Alu -32 281 1 1951 135 3 7 chr5 160176338 160176644 -39453506 + AluSq SINE Alu 2 306 0 2153 118 3 3 chr5 160176649 160176953 -39453197 + AluSc SINE Alu 1 304 -5 252 0 0 0 chr5 160177467 160177495 -39452655 + (A)n Simple_repeat Simple_repeat 1 28 0 2033 105 0 0 chr5 160177544 160177811 -39452339 + AluSq SINE Alu 46 312 -1 301 246 228 0 chr5 160177819 160177933 -39452217 + MIR SINE MIR 47 186 -76 466 320 30 20 chr5 160178226 160178429 -39451721 - MIR3 SINE MIR 0 208 4 336 262 87 0 chr5 160178894 160178997 -39451153 - L1ME LINE L1 -442 5679 5568 454 245 20 0 chr5 160179000 160179102 -39451048 - MLT1K LTR MaLR 0 588 485 239 298 137 48 chr5 160179102 160179124 -39451026 - LTR67 LTR ERVL 0 557 423 402 21 0 0 chr5 160179274 160179284 -39450866 + (TG)n Simple_repeat Simple_repeat 1 57 0 402 21 0 0 chr5 160179284 160179331 -39450819 + (TG)n Simple_repeat Simple_repeat 2 48 0 385 198 35 12 chr5 160179371 160179457 -39450693 - LTR67 LTR ERVL -74 483 396 231 318 15 15 chr5 160179573 160179639 -39450511 - LTR67 LTR ERVL -341 216 151 321 26 0 0 chr5 160179689 160179727 -39450423 + (TATG)n Simple_repeat Simple_repeat 2 39 0 925 174 13 0 chr5 160179731 160179886 -39450264 - FRAM SINE Alu -20 156 1 239 282 26 13 chr5 160179929 160180007 -39450143 - LTR67 LTR ERVL -477 80 2 216 0 0 0 chr5 160180843 160180867 -39449283 + (T)n Simple_repeat Simple_repeat 1 24 0 783 299 88 66 chr5 160181465 160181966 -39448184 - MLT1K LTR MaLR -10 578 67 2434 94 0 0 chr5 160182557 160182865 -39447285 - AluY SINE Alu -3 308 1 456 19 0 0 chr5 160182905 160182958 -39447192 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 525 176 12 0 chr5 160183019 160183104 -39447046 + FLAM_C SINE Alu 31 116 -27 2599 58 0 0 chr5 160183491 160183800 -39446350 - AluY SINE Alu -2 309 1 823 136 23 17 chr5 160183801 160183977 -39446173 + CT-rich Low_complexity Low_complexity 1 177 0 2193 123 7 0 chr5 160183977 160184279 -39445871 - AluSx SINE Alu -8 304 1 2180 100 13 16 chr5 160184586 160184895 -39445255 + AluSx SINE Alu 1 308 -4 276 247 155 105 chr5 160185331 160185966 -39444184 - L2 LINE L2 0 3313 2589 329 294 49 42 chr5 160186011 160186154 -39443996 + MIR SINE MIR 119 262 0 2018 145 3 13 chr5 160186412 160186716 -39443434 + AluJb SINE Alu 1 301 -11 247 335 145 13 chr5 160187110 160187262 -39442888 - MIR SINE MIR -90 172 1 2299 121 0 3 chr5 160187319 160187632 -39442518 - AluSx SINE Alu 0 312 1 403 205 102 106 chr5 160187901 160188204 -39441946 + L1ME4a LINE L1 5678 5979 -142 1671 117 85 0 chr5 160188214 160188510 -39441640 - MER33 DNA MER1_type -10 314 1 23 68 0 0 chr5 160188634 160188678 -39441472 + AT_rich Low_complexity Low_complexity 1 44 0 1110 158 0 0 chr5 160189260 160189425 -39440725 + FRAM SINE Alu 1 164 -12 259 138 0 52 chr5 160189723 160189781 -39440369 - MIR SINE MIR -32 230 176 3498 87 7 4 chr5 160189799 160190261 -39439889 - L1PB1 LINE L1 -1 6150 5688 803 159 131 0 chr5 160190263 160190408 -39439742 + MSTD LTR MaLR 233 396 0 277 361 33 25 chr5 160191096 160191218 -39438932 - MIR SINE MIR -72 190 68 402 21 0 0 chr5 160191539 160191586 -39438564 + (ATG)n Simple_repeat Simple_repeat 1 47 0 473 229 172 13 chr5 160191586 160191759 -39438391 - MIR SINE MIR -5 257 42 238 277 84 0 chr5 160191805 160191888 -39438262 + MIR SINE MIR 52 141 -121 312 161 0 0 chr5 160192094 160192156 -39437994 + (CCA)n Simple_repeat Simple_repeat 2 63 0 195 264 94 0 chr5 160192534 160192587 -39437563 + L2 LINE L2 3199 3256 -57 * 687 345 73 14 chr5 160192582 160192936 -39437214 - L2 LINE L2 -39 3233 2859 221 320 13 0 chr5 160193554 160193568 -39436582 + GA-rich Low_complexity Low_complexity 1 13 -66 2681 204 87 18 chr5 160193568 160194118 -39436032 - MLT1E LTR MaLR -3 590 3 221 320 13 0 chr5 160194118 160194181 -39435969 + GA-rich Low_complexity Low_complexity 13 79 0 468 331 41 29 chr5 160194198 160194443 -39435707 - MIR SINE MIR -10 252 5 483 270 44 53 chr5 160195407 160195641 -39434509 + MIR SINE MIR 21 247 -15 716 261 37 28 chr5 160195872 160196087 -39434063 + MIR SINE MIR 46 262 0 183 256 0 0 chr5 160196308 160196351 -39433799 - MIR3 SINE MIR -1 207 165 365 221 114 43 chr5 160196721 160196861 -39433289 - MIR3 SINE MIR -46 162 13 360 224 0 0 chr5 160197054 160197121 -39433029 - MIR SINE MIR 0 262 196 301 326 101 43 chr5 160197089 160197227 -39432923 + MER91A DNA MER1_type 8 153 -43 * 242 258 47 0 chr5 160197338 160197408 -39432742 - MIR SINE MIR -108 100 30 390 269 29 0 chr5 160197466 160197570 -39432580 + L2 LINE L2 3164 3270 -2 * 434 282 40 8 chr5 160197569 160197693 -39432457 - MIR SINE MIR -115 147 20 1114 168 11 16 chr5 160198816 160199006 -39431144 + MER5A DNA MER1_type 1 189 0 518 211 12 94 chr5 160199102 160199183 -39430967 + MIR SINE MIR 45 104 -153 742 228 127 21 chr5 160199183 160199372 -39430778 + MER63A DNA MER1_type 2 210 0 518 211 12 94 chr5 160199372 160199455 -39430695 + MIR SINE MIR 104 192 -65 474 244 163 20 chr5 160199457 160199654 -39430496 - MIR SINE MIR 0 262 40 514 274 119 35 chr5 160199954 160200297 -39429853 - L1ME4a LINE L1 -128 5993 5622 1787 223 50 43 chr5 160200458 160200765 -39429385 - L1MC5 LINE L1 -44 7917 7603 2011 163 0 13 chr5 160200765 160201072 -39429078 - AluJb SINE Alu -7 305 3 1787 223 50 43 chr5 160201072 160201347 -39428803 - L1MC5 LINE L1 -358 7603 7331 1184 178 15 0 chr5 160201348 160201550 -39428600 - MER3 DNA MER1_type 0 209 5 520 318 70 50 chr5 160202299 160202557 -39427593 - L2 LINE L2 -38 3234 2972 764 220 121 16 chr5 160202778 160202960 -39427190 - MER63A DNA MER1_type -1 209 9 251 236 0 0 chr5 160203787 160203875 -39426275 + L2 LINE L2 3188 3272 0 * 284 268 29 132 chr5 160203874 160204079 -39426071 - L2 LINE L2 -55 3217 3034 1931 150 3 0 chr5 160204551 160204845 -39425305 + AluJo SINE Alu 1 295 -17 323 220 119 34 chr5 160205248 160205366 -39424784 - L1MC5 LINE L1 -66 7895 7768 1715 151 44 7 chr5 160205407 160205719 -39424431 + AluJo SINE Alu 1 322 0 369 284 119 0 chr5 160205729 160205838 -39424312 - MIR3 SINE MIR -20 188 67 1512 128 43 4 chr5 160206874 160207108 -39423042 - L1PB1 LINE L1 -4 6147 5905 284 192 34 51 chr5 160207268 160207420 -39422730 + L2 LINE L2 3114 3304 -9 286 216 45 11 chr5 160207511 160207599 -39422551 - MIR SINE MIR -13 249 159 2431 184 134 11 chr5 160207599 160208138 -39422012 - MER77 LTR ERV1 0 605 1 229 350 124 22 chr5 160208138 160208275 -39421875 - MIR SINE MIR -99 163 13 229 293 37 0 chr5 160208821 160208903 -39421247 - MER103 DNA DNA -80 86 2 210 333 111 0 chr5 160209098 160209188 -39420962 - L2 LINE L2 0 3272 3173 254 294 128 0 chr5 160210050 160210152 -39419998 - MLT1K LTR MaLR -326 262 148 594 242 43 90 chr5 160210830 160211086 -39419064 + MIR SINE MIR 13 256 -6 413 318 9 9 chr5 160211602 160211762 -39418388 - MER5B DNA MER1_type -23 166 4 1962 143 7 10 chr5 160211762 160212063 -39418087 + AluJb SINE Alu 1 300 -12 520 259 26 86 chr5 160212065 160212150 -39418000 + MIR SINE MIR 26 115 -147 2566 99 48 17 chr5 160212150 160212503 -39417647 - THE1B LTR MaLR 0 364 1 12565 81 14 12 chr5 160212503 160214079 -39416071 - THE1B-int LTR MaLR 0 1580 2 2550 91 50 6 chr5 160214080 160214420 -39415730 - THE1A LTR MaLR 0 355 1 520 259 26 86 chr5 160214420 160214578 -39415572 + MIR SINE MIR 113 259 -3 231 224 35 0 chr5 160214613 160214671 -39415479 + CT-rich Low_complexity Low_complexity 3 62 0 616 253 221 28 chr5 160214673 160214958 -39415192 - MLT1J LTR MaLR -28 483 144 588 263 64 53 chr5 160215282 160215639 -39414511 - L1ME4a LINE L1 -7 6114 5754 276 300 55 0 chr5 160216265 160216375 -39413775 - MIR SINE MIR -115 147 32 693 285 97 4 chr5 160216435 160216663 -39413487 + MIR SINE MIR 12 260 -2 575 122 0 0 chr5 160216726 160216808 -39413342 - L1PA13 LINE L1 -25 6138 6057 469 214 0 0 chr5 160216804 160216893 -39413257 - L1ME4a LINE L1 -792 5541 5453 * 215 250 0 0 chr5 160218003 160218055 -39412095 + (TA)n Simple_repeat Simple_repeat 2 53 0 1696 147 3 50 chr5 160218188 160218307 -39411843 - Tigger1 DNA MER2_type 0 2418 2295 2238 104 14 0 chr5 160218307 160218604 -39411546 + AluSc SINE Alu 1 301 -8 1696 147 3 50 chr5 160218604 160218784 -39411366 - Tigger1 DNA MER2_type -123 2295 2133 * 5774 132 16 11 chr5 160218782 160219669 -39410481 - Tigger1 DNA MER2_type -1527 891 1 46 45 0 0 chr5 160220083 160220150 -39410000 + AT_rich Low_complexity Low_complexity 1 67 0 206 182 45 0 chr5 160220160 160220204 -39409946 + (TATG)n Simple_repeat Simple_repeat 3 48 0 192 77 0 0 chr5 160220295 160220321 -39409829 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 202 311 122 0 chr5 160220467 160220557 -39409593 - L2 LINE L2 -56 3216 3116 187 154 103 0 chr5 160221232 160221271 -39408879 - L2 LINE L2 -8 3305 3263 368 331 129 0 chr5 160221371 160221495 -39408655 - L2 LINE L2 -18 3254 3115 305 293 50 0 chr5 160221553 160221652 -39408498 + L2 LINE L2 2311 2414 -900 487 286 39 7 chr5 160221688 160221842 -39408308 - L2 LINE L2 0 3272 3114 2313 87 0 7 chr5 160221843 160222142 -39408008 + AluSx SINE Alu 3 299 -13 621 0 0 0 chr5 160222142 160222211 -39407939 + (GGAA)n Simple_repeat Simple_repeat 3 71 0 2039 110 0 67 chr5 160222246 160222652 -39407498 + Charlie3 DNA MER1_type 1 2712 0 706 244 48 39 chr5 160222857 160223086 -39407064 + L1ME3 LINE L1 5910 6140 -22 339 222 106 85 chr5 160223099 160223288 -39406862 + L1ME4a LINE L1 5926 6118 -3 601 280 30 67 chr5 160223924 160224260 -39405890 + L1ME LINE L1 5444 5760 -361 359 188 0 0 chr5 160224465 160224529 -39405621 + L1MB2 LINE L1 6015 6078 -93 2192 94 0 0 chr5 160274578 160274853 -39355297 + AluSx SINE Alu 1 275 -37 269 0 56 0 chr5 160274857 160274893 -39355257 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 615 294 71 29 chr5 160274896 160275206 -39354944 - L2 LINE L2 -78 3235 2913 846 177 0 7 chr5 160275208 160275349 -39354801 - AluJb SINE Alu -5 307 168 293 294 118 6 chr5 160275388 160275558 -39354592 + L2 LINE L2 1330 1518 -1796 281 248 62 153 chr5 160275675 160275775 -39354375 - L2 LINE L2 -159 3154 3047 1395 160 93 15 chr5 160275775 160276044 -39354106 - AluJb SINE Alu -20 292 3 2145 85 3 7 chr5 160276051 160276369 -39353781 - AluSc SINE Alu 0 317 1 281 248 62 153 chr5 160276369 160276500 -39353650 - L2 LINE L2 -272 3041 2935 708 164 0 0 chr5 160276510 160276620 -39353530 + MER20 DNA MER1_type 110 219 0 317 300 0 2 chr5 160276626 160276717 -39353433 - MIR SINE MIR -62 146 63 1711 140 95 3 chr5 160276905 160277190 -39352960 - AluSx SINE Alu -1 311 1 770 153 0 32 chr5 160277193 160277317 -39352833 - FRAM SINE Alu -17 159 40 1621 181 0 17 chr5 160277538 160277825 -39352325 + AluJb SINE Alu 1 282 -30 380 116 23 105 chr5 160277892 160277978 -39352172 + ORSL DNA AcHobo 12 90 -185 1822 109 0 0 chr5 160277980 160278218 -39351932 + AluSx SINE Alu 1 238 -74 238 324 15 0 chr5 160278406 160278474 -39351676 + L3 LINE CR1 1369 1437 -140 2230 97 0 7 chr5 160278897 160279195 -39350955 - AluSg SINE Alu -14 296 1 2021 129 16 7 chr5 160279309 160279612 -39350538 - AluSq SINE Alu -7 306 1 257 300 0 0 chr5 160279773 160279833 -39350317 + MER91 DNA MER1_type 131 190 0 213 378 0 0 chr5 160279954 160280036 -39350114 + L3 LINE CR1 1494 1575 -2 1941 140 20 7 chr5 160280258 160280551 -39349599 + AluSg SINE Alu 1 297 -13 2094 141 0 6 chr5 160280858 160281170 -39348980 + AluSx SINE Alu 1 310 -2 2314 99 3 10 chr5 160281472 160281786 -39348364 + AluSx SINE Alu 1 312 0 1069 77 21 21 chr5 160282004 160282147 -39348003 + AluY SINE Alu 1 143 -168 531 310 11 21 chr5 160282282 160282469 -39347681 + MIR SINE MIR 3 187 -75 842 163 0 0 chr5 160282469 160282592 -39347558 + AluJb SINE Alu 1 123 -189 1643 169 4 0 chr5 160282606 160282872 -39347278 + AluJo SINE Alu 2 268 -44 1958 112 34 17 chr5 160282931 160283225 -39346925 + AluSx SINE Alu 1 299 -13 2342 64 40 3 chr5 160283225 160283522 -39346628 + AluY SINE Alu 1 308 -3 1778 183 10 7 chr5 160283538 160283839 -39346311 + AluJo SINE Alu 1 302 -10 2354 98 7 0 chr5 160283839 160284146 -39346004 + AluSc SINE Alu 1 309 0 244 200 59 71 chr5 160284149 160284234 -39345916 + MIR SINE MIR 179 262 0 351 253 0 0 chr5 160284250 160284329 -39345821 + HsTC2 DNA Tc2 1 79 -1819 1662 96 0 0 chr5 160284852 160285071 -39345079 + AluY SINE Alu 1 219 -92 567 279 113 50 chr5 160285176 160285229 -39344921 - L2 LINE L2 -556 2758 2710 2466 94 0 0 chr5 160285229 160285538 -39344612 - AluSq SINE Alu -4 309 1 567 279 113 50 chr5 160285538 160285706 -39344444 - L2 LINE L2 -604 2710 2523 505 232 196 45 chr5 160285807 160286027 -39344123 + MIR SINE MIR 10 262 0 2170 138 0 10 chr5 160286213 160286524 -39343626 - AluSx SINE Alu -4 308 1 180 0 0 0 chr5 160286530 160286550 -39343600 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 2244 93 3 0 chr5 160286553 160286842 -39343308 - AluSp SINE Alu -23 290 1 2480 65 0 3 chr5 160287250 160287559 -39342591 - AluY SINE Alu -3 308 1 609 325 34 4 chr5 160287665 160287899 -39342251 + MIR SINE MIR 12 252 -10 653 133 0 9 chr5 160287904 160288017 -39342133 + (GGGA)n Simple_repeat Simple_repeat 1 112 0 215 268 0 12 chr5 160288490 160288572 -39341578 + GA-rich Low_complexity Low_complexity 1 81 0 2169 100 4 0 chr5 160288591 160288896 -39341254 + AluSq SINE Alu 1 306 0 249 284 201 52 chr5 160289146 160289280 -39340870 + MIR SINE MIR 11 164 -98 1133 199 0 0 chr5 160289343 160289534 -39340616 - AluJb SINE Alu -15 297 107 618 278 33 21 chr5 160290022 160290227 -39339923 + MIR SINE MIR 3 208 -54 224 381 35 23 chr5 160290353 160290526 -39339624 - MIR3 SINE MIR -14 194 20 571 264 110 0 chr5 160291033 160291215 -39338935 - MIR SINE MIR -7 255 54 4488 88 3 0 chr5 160291678 160292259 -39337891 + L1PA7 LINE L1 5572 6154 0 371 326 45 34 chr5 160292569 160292747 -39337403 + MIR3 SINE MIR 26 205 -3 23 78 0 0 chr5 160293375 160293426 -39336724 + AT_rich Low_complexity Low_complexity 1 51 0 213 39 0 0 chr5 160295274 160295300 -39334850 + (CA)n Simple_repeat Simple_repeat 2 27 0 680 302 16 20 chr5 160295761 160296009 -39334141 - MIR SINE MIR -5 257 11 1002 215 28 19 chr5 160296089 160296314 -39333836 + MER20 DNA MER1_type 1 219 0 218 128 0 43 chr5 160298555 160298602 -39331548 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 21 36 0 0 chr5 160299677 160299705 -39330445 + AT_rich Low_complexity Low_complexity 1 28 0 2039 145 16 0 chr5 160301758 160302061 -39328089 - AluJo SINE Alu -4 308 1 663 81 0 0 chr5 160302298 160302384 -39327766 + AluSg1 SINE Alu 1 86 -223 1232 160 21 0 chr5 160302484 160302678 -39327472 + AluY SINE Alu 103 300 -11 773 323 15 8 chr5 160302880 160303140 -39327010 + MIR SINE MIR 1 262 0 225 132 0 0 chr5 160303159 160303197 -39326953 + (A)n Simple_repeat Simple_repeat 1 38 0 280 176 203 0 chr5 160303981 160304055 -39326095 + L1MC/D LINE L1 5732 5820 -1988 2085 108 4 0 chr5 160304198 160304475 -39325675 - AluSp SINE Alu -12 301 24 2072 112 0 0 chr5 160304892 160305178 -39324972 + AluSg1 SINE Alu 1 286 -23 441 221 0 0 chr5 160305181 160305285 -39324865 + (CATATA)n Simple_repeat Simple_repeat 2 105 0 458 294 108 33 chr5 160305527 160305741 -39324409 + MIR SINE MIR 16 245 -17 1664 172 41 3 chr5 160305888 160306178 -39323972 + AluJb SINE Alu 1 301 -11 2358 91 3 0 chr5 160306245 160306542 -39323608 + AluSq SINE Alu 1 298 -15 674 138 110 0 chr5 160306542 160306651 -39323499 + AluSc SINE Alu 169 289 -20 25 51 0 0 chr5 160307454 160307493 -39322657 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 160308042 160308064 -39322086 + AT_rich Low_complexity Low_complexity 1 22 0 2341 94 0 10 chr5 160308083 160308390 -39321760 + AluSx SINE Alu 1 304 -8 1730 158 19 35 chr5 160309436 160309747 -39320403 - AluJb SINE Alu -6 306 1 2337 259 109 79 chr5 160310121 160310449 -39319701 + HAL1 LINE L1 1 318 -2189 1869 82 107 14 chr5 160310449 160310730 -39319420 + AluSp SINE Alu 1 307 -6 2337 259 109 79 chr5 160310730 160310816 -39319334 + HAL1 LINE L1 318 400 -2107 261 98 0 0 chr5 160310816 160310857 -39319293 + (TAAAA)n Simple_repeat Simple_repeat 2 42 0 2337 259 109 79 chr5 160310857 160311086 -39319064 + HAL1 LINE L1 400 621 -1886 2001 134 24 0 chr5 160311086 160311376 -39318774 - AluSx SINE Alu -15 297 1 2337 259 109 79 chr5 160311376 160311651 -39318499 + HAL1 LINE L1 621 886 -1621 687 167 23 23 chr5 160311651 160311783 -39318367 + FLAM_A SINE Alu 1 132 -1 2337 259 109 79 chr5 160311783 160312870 -39317280 + HAL1 LINE L1 886 2070 -437 2376 86 3 0 chr5 160313158 160313450 -39316700 + AluSp SINE Alu 1 293 -20 1232 127 0 21 chr5 160314822 160315011 -39315139 + AluSg/x SINE Alu 118 302 -10 2000 128 0 4 chr5 160315020 160315301 -39314849 + AluSx SINE Alu 1 280 -32 459 0 0 0 chr5 160315307 160315358 -39314792 + (CA)n Simple_repeat Simple_repeat 2 52 0 670 228 50 56 chr5 160315368 160315548 -39314602 + MIR SINE MIR 33 211 -51 2174 121 21 24 chr5 160316702 160317040 -39313110 + MER1B DNA MER1_type 1 337 0 1010 143 56 17 chr5 160318466 160318550 -39311600 + L1MA8 LINE L1 6048 6127 -164 901 204 0 18 chr5 160318550 160318717 -39311433 - FAM SINE Alu -9 166 3 1010 143 56 17 chr5 160318717 160318863 -39311287 + L1MA8 LINE L1 6127 6287 -4 1583 108 5 5 chr5 160318871 160319093 -39311057 + AluSx SINE Alu 1 222 -90 784 250 53 19 chr5 160319308 160319572 -39310578 + L1MC3 LINE L1 5702 5974 -1834 21 36 0 0 chr5 160319746 160319774 -39310376 + AT_rich Low_complexity Low_complexity 1 28 0 2240 94 10 7 chr5 160319843 160320151 -39309999 + AluSq SINE Alu 1 309 -4 1295 195 73 17 chr5 160320388 160320732 -39309418 + L1ME3 LINE L1 5779 6141 -21 329 333 63 6 chr5 160321553 160321712 -39308438 + MIR SINE MIR 53 220 -42 454 222 7 90 chr5 160322183 160322246 -39307904 - MER5A DNA MER1_type -2 187 141 2461 61 0 0 chr5 160322246 160322541 -39307609 + AluY SINE Alu 1 295 -16 454 222 7 90 chr5 160322541 160322621 -39307529 - MER5A DNA MER1_type -48 141 56 1287 148 15 20 chr5 160323585 160323787 -39306363 - AluJo SINE Alu -111 201 1 13493 128 38 22 chr5 160324452 160324898 -39305252 - Tigger1 DNA MER2_type 0 2418 1981 2322 68 0 74 chr5 160324898 160325221 -39304929 + AluSp SINE Alu 1 299 -14 13493 128 38 22 chr5 160325221 160326288 -39303862 - Tigger1 DNA MER2_type -437 1981 933 1887 126 26 0 chr5 160326288 160326558 -39303592 - AluSq SINE Alu -34 279 3 13493 128 38 22 chr5 160326558 160326856 -39303294 - Tigger1 DNA MER2_type -1485 933 641 2384 98 0 0 chr5 160326856 160327162 -39302988 + AluSx SINE Alu 1 306 -6 13493 128 38 22 chr5 160327162 160327714 -39302436 - Tigger1 DNA MER2_type -1777 641 14 339 250 55 39 chr5 160328377 160328505 -39301645 + L1MC3 LINE L1 6005 6134 -32 2074 123 3 7 chr5 160328506 160328814 -39301336 + AluSg SINE Alu 1 307 -3 1242 152 0 0 chr5 160328824 160329002 -39301148 + AluSg/x SINE Alu 122 299 -11 4602 202 68 89 chr5 160329027 160329879 -39300271 + L1MC4a LINE L1 6166 6969 -839 587 228 49 0 chr5 160329879 160330002 -39300148 + FLAM_A SINE Alu 1 129 -4 4602 202 68 89 chr5 160330002 160330820 -39299330 + L1MC4a LINE L1 6969 7802 -6 2308 56 31 0 chr5 160330856 160331143 -39299007 - AluY SINE Alu -15 296 1 1321 108 118 83 chr5 160331145 160331433 -39298717 - AluSc SINE Alu -11 298 1 207 354 15 0 chr5 160331475 160331540 -39298610 - L2 LINE L2 -27 3245 3180 1766 133 43 36 chr5 160331865 160332167 -39297983 + AluSx SINE Alu 1 304 -8 1231 46 0 0 chr5 160332374 160332527 -39297623 + L1PA5 LINE L1 6002 6154 0 219 36 0 0 chr5 160332554 160332582 -39297568 + (GAAA)n Simple_repeat Simple_repeat 3 30 0 271 246 132 11 chr5 160332589 160332731 -39297419 - MIR SINE MIR -60 202 37 666 251 103 33 chr5 160332876 160332988 -39297162 + L1MC4 LINE L1 7177 7280 -762 2349 103 0 7 chr5 160332988 160333298 -39296852 - AluSq SINE Alu -5 308 1 666 251 103 33 chr5 160333298 160333575 -39296575 + L1MC4 LINE L1 7280 7593 -449 352 119 0 0 chr5 160333699 160333758 -39296392 + Alu SINE Alu 243 301 0 322 250 27 0 chr5 160333807 160333919 -39296231 + L1MC4 LINE L1 7927 8041 -1 2171 109 0 0 chr5 160333929 160334248 -39295902 + AluSq SINE Alu 1 319 0 21 0 0 0 chr5 160334851 160334872 -39295278 + AT_rich Low_complexity Low_complexity 1 21 0 30 34 0 34 chr5 160335054 160335090 -39295060 + AT_rich Low_complexity Low_complexity 1 36 -21 2363 107 0 0 chr5 160335090 160335398 -39294752 + AluSc SINE Alu 1 308 -1 30 34 0 34 chr5 160335398 160335420 -39294730 + AT_rich Low_complexity Low_complexity 36 57 0 28 29 0 0 chr5 160335735 160335770 -39294380 + AT_rich Low_complexity Low_complexity 1 35 0 1807 124 37 47 chr5 160335920 160336218 -39293932 + AluSx SINE Alu 1 295 -17 24 0 0 0 chr5 160336394 160336418 -39293732 + AT_rich Low_complexity Low_complexity 1 24 0 243 0 0 0 chr5 160336999 160337026 -39293124 + (A)n Simple_repeat Simple_repeat 1 27 0 1003 127 32 0 chr5 160337031 160337189 -39292961 + AluSp SINE Alu 5 167 -146 2434 79 0 0 chr5 160337653 160337958 -39292192 + AluY SINE Alu 1 305 -6 189 0 0 0 chr5 160337958 160337979 -39292171 + (TA)n Simple_repeat Simple_repeat 2 22 0 2101 103 7 0 chr5 160338288 160338578 -39291572 + AluSx SINE Alu 1 292 -20 338 61 20 0 chr5 160338802 160338851 -39291299 + Alu SINE Alu 1 50 -251 1919 87 0 0 chr5 160338951 160339204 -39290946 - AluSx SINE Alu -59 253 1 2086 110 3 0 chr5 160340044 160340336 -39289814 - AluY SINE Alu -18 293 1 2360 72 0 0 chr5 160340346 160340638 -39289512 - AluSc SINE Alu -17 292 1 2038 118 24 0 chr5 160340722 160341011 -39289139 + AluSx SINE Alu 1 296 -16 2236 101 3 0 chr5 160341015 160341313 -39288837 + AluSg SINE Alu 1 299 -11 518 107 0 0 chr5 160341341 160341425 -39288725 - MER3 DNA MER1_type -6 203 120 974 167 0 0 chr5 160341425 160341595 -39288555 + AluSg/x SINE Alu 137 306 0 2019 131 0 35 chr5 160341603 160341916 -39288234 + AluSx SINE Alu 1 302 -10 189 74 0 0 chr5 160342061 160342088 -39288062 + (CA)n Simple_repeat Simple_repeat 2 28 0 249 259 0 0 chr5 160342150 160342204 -39287946 + L2 LINE L2 3255 3308 -5 346 354 174 20 chr5 160342314 160342509 -39287641 + L2 LINE L2 3047 3271 -1 481 225 53 46 chr5 160342634 160342785 -39287365 - L2 LINE L2 -4 3309 3158 1578 144 16 83 chr5 160342865 160343003 -39287147 + AluJb SINE Alu 3 110 -202 2197 118 0 3 chr5 160343003 160343299 -39286851 + AluSg SINE Alu 1 295 -15 1578 144 16 83 chr5 160343299 160343472 -39286678 + AluJb SINE Alu 110 293 -19 2417 59 3 0 chr5 160343473 160343756 -39286394 + AluY SINE Alu 1 287 -24 354 23 0 0 chr5 160343756 160343799 -39286351 + (CA)n Simple_repeat Simple_repeat 2 44 0 390 244 11 11 chr5 160343843 160343933 -39286217 - L2 LINE L2 -1 3312 3223 2497 74 3 0 chr5 160343935 160344245 -39285905 + AluY SINE Alu 1 311 0 733 147 0 0 chr5 160344257 160344366 -39285784 + AluSq/x SINE Alu 1 109 -204 1558 216 29 45 chr5 160344497 160344566 -39285584 - MLT1F LTR MaLR 0 542 473 2247 95 0 0 chr5 160344566 160344881 -39285269 + AluSq SINE Alu 1 315 0 825 137 0 8 chr5 160344884 160345008 -39285142 - FLAM_A SINE Alu -10 123 1 1558 216 29 45 chr5 160345008 160345411 -39284739 - MLT1F LTR MaLR -71 471 1 1795 246 116 39 chr5 160345411 160345820 -39284330 + L2 LINE L2 2316 2692 -621 2312 102 7 0 chr5 160345820 160346125 -39284025 + AluSg SINE Alu 1 307 -3 1795 246 116 39 chr5 160346125 160346154 -39283996 + L2 LINE L2 2692 2717 -596 1777 188 14 0 chr5 160346154 160346446 -39283704 - AluJb SINE Alu -15 297 2 1795 246 116 39 chr5 160346446 160346903 -39283247 + L2 LINE L2 2717 3304 -9 181 254 0 34 chr5 160346919 160346978 -39283172 + MIR SINE MIR 176 232 -30 1731 163 3 7 chr5 160347381 160347669 -39282481 - AluJo SINE Alu -16 296 10 601 170 89 3 chr5 160347686 160347909 -39282241 - AluJb SINE Alu -9 303 4 1997 108 59 11 chr5 160347922 160348208 -39281942 - AluSx SINE Alu -12 300 1 679 168 0 96 chr5 160348215 160348318 -39281832 - L1MD1 LINE L1 -11 6231 6148 779 208 0 0 chr5 160348318 160348443 -39281707 - FLAM_A SINE Alu -7 126 2 679 168 0 96 chr5 160348443 160348506 -39281644 - L1MD1 LINE L1 -94 6148 6081 351 0 0 0 chr5 160348519 160348558 -39281592 + (TG)n Simple_repeat Simple_repeat 2 40 0 8710 104 19 26 chr5 160348592 160349540 -39280610 + HSMAR2 DNA Mariner 7 945 -357 2338 84 7 0 chr5 160349540 160349837 -39280313 + AluYa5 SINE Alu 1 299 -12 8710 104 19 26 chr5 160349837 160350192 -39279958 + HSMAR2 DNA Mariner 945 1301 -1 583 168 24 8 chr5 160350260 160350385 -39279765 - L1MD2 LINE L1 -224 6135 6009 511 211 19 0 chr5 160350406 160350510 -39279640 - MLT1F1 LTR MaLR -279 288 183 1068 171 11 0 chr5 160350511 160350723 -39279427 - AluSg/x SINE Alu 0 312 126 295 276 110 35 chr5 160350794 160350939 -39279211 + MIR3 SINE MIR 3 158 -50 320 273 34 0 chr5 160350996 160351084 -39279066 + MER58B DNA MER1_type 2 92 -249 1930 104 0 81 chr5 160351105 160351254 -39278896 - AluSx SINE Alu -30 282 169 2305 98 0 0 chr5 160351254 160351549 -39278601 - AluSg SINE Alu -15 295 1 1930 104 0 81 chr5 160351549 160351706 -39278444 - AluSx SINE Alu -143 169 1 1867 88 88 15 chr5 160351711 160351984 -39278166 - AluSq SINE Alu -20 293 1 832 194 85 36 chr5 160351989 160352236 -39277914 + MER58B DNA MER1_type 83 341 0 310 247 37 0 chr5 160352375 160352456 -39277694 + L2 LINE L2 3184 3267 -5 2276 82 0 0 chr5 160354648 160354940 -39275210 - AluSx SINE Alu -20 292 1 2150 119 0 3 chr5 160355481 160355783 -39274367 + AluSg SINE Alu 1 301 -9 1982 130 0 7 chr5 160356314 160356625 -39273525 - AluSq SINE Alu 0 309 1 2104 97 34 7 chr5 160356957 160357255 -39272895 - AluSg SINE Alu -4 306 1 2279 76 48 0 chr5 160357397 160357687 -39272463 - AluSx SINE Alu -8 304 1 2507 73 3 0 chr5 160357694 160357997 -39272153 - AluSg SINE Alu -6 304 1 26 50 0 0 chr5 160358580 160358620 -39271530 + AT_rich Low_complexity Low_complexity 1 40 0 194 355 0 0 chr5 160358753 160358815 -39271335 + MIR SINE MIR 54 115 -93 342 318 142 7 chr5 160359812 160359960 -39270190 + L2 LINE L2 3104 3271 -1 304 91 45 0 chr5 160360201 160360245 -39269905 + MLT1A1 LTR MaLR 1 46 -319 902 129 45 129 chr5 160360286 160360409 -39269741 + MLT1A1 LTR MaLR 179 311 -54 2495 63 0 0 chr5 160360409 160360710 -39269440 + AluY SINE Alu 1 301 -10 902 129 45 129 chr5 160360710 160360733 -39269417 + MLT1A1 LTR MaLR 311 334 -31 1822 158 0 26 chr5 160360733 160361037 -39269113 + AluJb SINE Alu 1 296 -16 902 129 45 129 chr5 160361037 160361091 -39269059 + MLT1A1 LTR MaLR 334 363 -2 2072 88 71 10 chr5 160361209 160361504 -39268646 - AluSp SINE Alu 0 313 1 2298 79 0 0 chr5 160361816 160362096 -39268054 - AluSg SINE Alu -30 280 1 1916 155 0 17 chr5 160362100 160362396 -39267754 - AluJo SINE Alu -21 291 1 201 121 0 0 chr5 160362426 160362459 -39267691 + (TTATA)n Simple_repeat Simple_repeat 5 37 0 1086 125 6 25 chr5 160362464 160362624 -39267526 - AluSq SINE Alu -24 289 133 23 0 0 0 chr5 160362716 160362739 -39267411 + AT_rich Low_complexity Low_complexity 1 23 0 2306 93 13 0 chr5 160362839 160363141 -39267009 - AluSp SINE Alu -7 306 1 2156 123 0 0 chr5 160364792 160365092 -39265058 - AluSx SINE Alu -12 300 1 2265 83 10 0 chr5 160365500 160365790 -39264360 - AluSg SINE Alu -17 293 1 1320 177 136 4 chr5 160365801 160366066 -39264084 - AluJb SINE Alu -12 300 1 842 127 95 25 chr5 160366111 160366315 -39263835 - L1MA9 LINE L1 -1 6290 6085 1878 163 13 0 chr5 160366396 160366696 -39263454 - AluJo SINE Alu -8 304 1 2256 95 0 0 chr5 160366715 160367009 -39263141 - AluSx SINE Alu -18 294 1 956 141 0 7 chr5 160367207 160367356 -39262794 - FRAM SINE Alu -2 174 27 1862 151 11 0 chr5 160367487 160367800 -39262350 - AluJb SINE Alu 0 316 1 696 295 101 19 chr5 160369287 160369605 -39260545 + L2 LINE L2 2776 3120 -193 24 0 0 0 chr5 160369612 160369636 -39260514 + AT_rich Low_complexity Low_complexity 1 24 0 699 188 23 15 chr5 160369642 160369775 -39260375 - AluJo SINE Alu -178 134 1 251 245 258 37 chr5 160369775 160369938 -39260212 + L2 LINE L2 3108 3306 -7 2359 72 3 3 chr5 160369938 160370231 -39259919 + AluSc SINE Alu 1 293 -16 219 69 0 0 chr5 160370231 160370260 -39259890 + (TA)n Simple_repeat Simple_repeat 1 29 0 285 66 0 21 chr5 160370677 160370903 -39259247 + AluY SINE Alu 1 294 -6 225 227 67 27 chr5 160370988 160371063 -39259087 - L1ME4a LINE L1 -73 6048 5971 1021 133 57 71 chr5 160371063 160371182 -39258968 + MER3 DNA MER1_type 2 118 -91 2256 107 7 0 chr5 160371182 160371473 -39258677 - AluSq SINE Alu -20 293 1 1021 133 57 71 chr5 160371473 160371563 -39258587 + MER3 DNA MER1_type 118 208 -1 22 35 0 0 chr5 160371623 160371652 -39258498 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr5 160371669 160371697 -39258453 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 160371804 160371833 -39258317 + AT_rich Low_complexity Low_complexity 1 29 0 2382 102 0 0 chr5 160372143 160372447 -39257703 + AluSx SINE Alu 1 304 -8 712 246 109 9 chr5 160372788 160373106 -39257044 - L1MC4a LINE L1 -1942 5866 5466 384 222 269 38 chr5 160373830 160374042 -39256108 + MIR SINE MIR 1 261 -1 26 50 0 0 chr5 160374096 160374136 -39256014 + AT_rich Low_complexity Low_complexity 1 40 0 2204 123 3 3 chr5 160374141 160374441 -39255709 + AluSq SINE Alu 1 300 -13 376 196 206 0 chr5 160374490 160374582 -39255568 - FLAM_C SINE Alu -3 130 20 640 261 29 37 chr5 160374603 160374848 -39255302 - L1MC4 LINE L1 -106 7936 7694 864 148 0 0 chr5 160374870 160374998 -39255152 - FLAM_C SINE Alu -10 133 6 2291 106 3 10 chr5 160375294 160375605 -39254545 - AluSg SINE Alu -1 309 1 1868 144 3 17 chr5 160375615 160375906 -39254244 - AluSx SINE Alu -23 289 3 2189 125 0 7 chr5 160376117 160376421 -39253729 - AluSq SINE Alu -11 302 1 476 191 99 14 chr5 160376974 160377115 -39253035 - L1MC5 LINE L1 -464 7497 7345 684 133 0 0 chr5 160377402 160377507 -39252643 + AluSg/x SINE Alu 203 307 -2 2357 98 10 0 chr5 160378016 160378322 -39251828 - AluSx SINE Alu -3 309 1 1581 188 3 38 chr5 160378333 160378653 -39251497 - AluJo SINE Alu -3 309 1 216 158 0 53 chr5 160378907 160378964 -39251186 + CT-rich Low_complexity Low_complexity 4 57 0 880 97 0 0 chr5 160380748 160380894 -39249256 - AluSx SINE Alu 0 314 169 234 263 26 0 chr5 160380907 160380983 -39249167 - L1MC5 LINE L1 -125 7836 7759 1163 115 0 0 chr5 160380984 160381140 -39249010 - AluSx SINE Alu -151 161 6 207 0 0 0 chr5 160381353 160381376 -39248774 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2046 105 18 0 chr5 160381379 160381656 -39248494 - AluSx SINE Alu -30 282 1 376 275 43 33 chr5 160381767 160381978 -39248172 - L1MC5 LINE L1 -30 7931 7719 513 259 57 78 chr5 160382040 160382305 -39247845 - L1MC4a LINE L1 -1749 6059 5803 2358 102 0 0 chr5 160382305 160382608 -39247542 - AluSc SINE Alu -6 303 1 513 259 57 78 chr5 160382608 160382728 -39247422 - L1MC4a LINE L1 -2005 5803 5682 21 36 0 0 chr5 160383754 160383782 -39246368 + AT_rich Low_complexity Low_complexity 1 28 0 902 141 0 16 chr5 160383783 160383911 -39246239 - FLAM_C SINE Alu -7 126 1 288 230 24 135 chr5 160384007 160384303 -39245847 - L1MC5 LINE L1 -40 7921 7659 1860 156 7 0 chr5 160384494 160384831 -39245319 + AluJb SINE Alu 1 339 0 1780 176 0 0 chr5 160385028 160385317 -39244833 + AluJb SINE Alu 1 289 -23 1834 138 6 38 chr5 160385426 160385744 -39244406 - AluJb SINE Alu -4 308 1 309 323 92 6 chr5 160385925 160386089 -39244061 - L1MC4 LINE L1 -1 8041 7864 544 167 16 48 chr5 160386125 160386251 -39243899 - L1ME2 LINE L1 -113 6051 5930 2164 122 14 0 chr5 160386380 160386674 -39243476 - AluSx SINE Alu -14 298 1 2380 85 3 0 chr5 160386685 160386991 -39243159 - AluSp SINE Alu -6 307 1 2359 102 0 0 chr5 160387446 160387741 -39242409 - AluSx SINE Alu -17 295 1 2214 104 3 0 chr5 160387980 160388279 -39241871 + AluSx SINE Alu 1 300 -12 847 213 79 10 chr5 160388558 160388760 -39241390 + MIR SINE MIR 46 261 -1 1950 160 13 7 chr5 160389221 160389528 -39240622 - AluSx SINE Alu -1 311 3 1944 147 10 10 chr5 160389530 160389837 -39240313 - AluJb SINE Alu -5 307 1 468 51 0 0 chr5 160390051 160390110 -39240040 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 2077 116 0 0 chr5 160390111 160390387 -39239763 - AluSx SINE Alu -36 276 1 277 200 14 186 chr5 160390627 160390772 -39239378 - L1MC5 LINE L1 -36 7925 7806 429 244 12 0 chr5 160391065 160391147 -39239003 - L2 LINE L2 -4 3268 3186 1577 137 95 0 chr5 160391256 160391519 -39238631 - AluSx SINE Alu -24 288 1 29 28 0 0 chr5 160391696 160391732 -39238418 + AT_rich Low_complexity Low_complexity 1 36 0 783 187 183 97 chr5 160391738 160391995 -39238155 - AluJo SINE Alu -33 279 1 2116 118 0 13 chr5 160392354 160392658 -39237492 - AluSx SINE Alu -12 300 1 2248 105 0 0 chr5 160392744 160393060 -39237090 + AluSq SINE Alu 1 316 0 315 248 128 45 chr5 160393131 160393264 -39236886 - MER46A DNA MER2_type -90 146 3 * 1149 175 0 19 chr5 160393264 160393355 -39236795 + MER46A DNA MER2_type 147 233 -3 21 0 0 0 chr5 160393506 160393527 -39236623 + AT_rich Low_complexity Low_complexity 1 21 0 686 217 66 46 chr5 160393974 160394126 -39236024 + FRAM SINE Alu 1 155 -11 1474 203 17 17 chr5 160394307 160394602 -39235548 - AluJo SINE Alu -17 295 1 189 0 0 0 chr5 160394620 160394641 -39235509 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1370 213 29 4 chr5 160394643 160394915 -39235235 - AluJo SINE Alu -21 291 13 274 262 0 0 chr5 160394952 160395013 -39235137 - U7 snRNA snRNA -1 62 2 1228 189 5 27 chr5 160395466 160395688 -39234462 + MER1B DNA MER1_type 123 339 0 932 194 6 34 chr5 160396291 160396466 -39233684 + FAM SINE Alu 1 170 -5 384 217 87 58 chr5 160396477 160396615 -39233535 - L1MC5 LINE L1 -48 7913 7772 1966 161 0 0 chr5 160396625 160396924 -39233226 - AluJo SINE Alu -13 299 1 1914 190 56 148 chr5 160396981 160398168 -39231982 - L1MC5 LINE L1 -181 7780 6704 1997 152 0 0 chr5 160398230 160398527 -39231623 - AluSx SINE Alu -15 297 1 1693 199 3 3 chr5 160398748 160399044 -39231106 - AluJo SINE Alu -16 296 1 287 119 0 0 chr5 160399165 160399207 -39230943 + AluY SINE Alu 1 42 -259 1483 93 18 18 chr5 160399307 160399533 -39230617 + AluSg/x SINE Alu 87 312 0 989 84 0 35 chr5 160399603 160399746 -39230404 - L1PA11 LINE L1 -3 6171 6034 2150 43 35 4 chr5 160400009 160400267 -39229883 + AluY SINE Alu 34 299 -12 2376 80 0 29 chr5 160400588 160400901 -39229249 - AluSg SINE Alu -6 304 1 2096 89 0 34 chr5 160402799 160403114 -39227036 - AluSg SINE Alu 0 305 1 674 190 0 0 chr5 160403991 160404107 -39226043 + FLAM_C SINE Alu 1 116 -17 1135 184 108 72 chr5 160404308 160404640 -39225510 - MER2 DNA MER2_type 0 344 1 221 309 73 0 chr5 160405193 160405261 -39224889 - L2 LINE L2 -40 3232 3160 2174 138 0 0 chr5 160405663 160405974 -39224176 - AluSx SINE Alu -1 311 1 362 106 43 0 chr5 160406097 160406180 -39223970 + (TA)n Simple_repeat Simple_repeat 2 91 -8 2150 106 0 14 chr5 160406180 160406472 -39223678 - AluSx SINE Alu -24 288 1 362 106 43 0 chr5 160406472 160406482 -39223668 + (TA)n Simple_repeat Simple_repeat 91 99 0 549 208 0 10 chr5 160406499 160406600 -39223550 - MIR SINE MIR -107 155 56 31 0 0 0 chr5 160406699 160406730 -39223420 + AT_rich Low_complexity Low_complexity 1 31 0 319 297 0 59 chr5 160406854 160406955 -39223195 + L2 LINE L2 3160 3254 -18 650 250 119 4 chr5 160407516 160407624 -39222526 - L1MC4 LINE L1 -592 7450 7356 2483 76 0 6 chr5 160407624 160407938 -39222212 - AluSp SINE Alu -1 312 1 650 250 119 4 chr5 160407938 160408065 -39222085 - L1MC4 LINE L1 -686 7356 7188 1782 158 38 14 chr5 160408588 160408880 -39221270 - AluSq SINE Alu -14 299 1 889 87 94 0 chr5 160409053 160409180 -39220970 + AluSp SINE Alu 1 139 -174 2168 95 41 0 chr5 160409301 160409595 -39220555 + AluSp SINE Alu 1 306 -7 2917 9 0 0 chr5 160409759 160410076 -39220074 + AluYb8 SINE Alu 1 317 -1 2057 127 3 3 chr5 160410086 160410386 -39219764 + AluSx SINE Alu 1 300 -12 697 186 0 0 chr5 160410474 160410592 -39219558 - FLAM_C SINE Alu -25 118 1 1056 216 42 65 chr5 160411203 160411513 -39218637 - MLT1A2 LTR MaLR -71 303 1 706 187 25 111 chr5 160411972 160412170 -39217980 + MER5A DNA MER1_type 8 188 -1 333 279 82 54 chr5 160412176 160412323 -39217827 + MER5A DNA MER1_type 36 186 -3 478 230 62 9 chr5 160412444 160412557 -39217593 + L2 LINE L2 3194 3312 -1 557 322 37 40 chr5 160412621 160412944 -39217206 - L3 LINE CR1 -354 1223 902 1993 124 23 10 chr5 160412945 160413252 -39216898 - AluSx SINE Alu -1 311 1 2133 119 3 6 chr5 160413891 160414202 -39215948 + AluSx SINE Alu 1 310 -2 2009 85 55 0 chr5 160414235 160414537 -39215613 - AluSp SINE Alu 0 317 1 195 162 0 0 chr5 160414723 160414760 -39215390 + A-rich Low_complexity Low_complexity 1 37 0 384 309 31 52 chr5 160414765 160415056 -39215094 + L1MC4a LINE L1 4730 5014 -1132 * 1249 271 168 52 chr5 160415054 160416241 -39213909 + L1MC4a LINE L1 5533 6856 -952 628 241 107 27 chr5 160416225 160416487 -39213663 + L1MC5 LINE L1 7290 7572 -389 * 1636 180 26 16 chr5 160416725 160417031 -39213119 + AluJb SINE Alu 4 312 0 1245 181 95 9 chr5 160417197 160417527 -39212623 - MER90 LTR ERV1 -122 453 99 2389 91 3 0 chr5 160418303 160418610 -39211540 - AluSp SINE Alu -5 308 1 1249 196 75 11 chr5 160418647 160418935 -39211215 - AluJo SINE Alu 0 305 1 21 0 0 0 chr5 160419073 160419094 -39211056 + AT_rich Low_complexity Low_complexity 1 21 0 186 311 0 0 chr5 160419669 160419714 -39210436 - L2 LINE L2 -5 3267 3223 745 150 100 0 chr5 160419820 160419940 -39210210 - FLAM_C SINE Alu 0 133 2 2380 81 3 0 chr5 160421189 160421484 -39208666 + AluSp SINE Alu 3 298 -15 2226 106 0 13 chr5 160422504 160422806 -39207344 + AluSq SINE Alu 1 298 -15 1377 98 0 0 chr5 160424062 160424236 -39205914 - AluSq SINE Alu -22 291 118 1994 115 6 37 chr5 160424316 160424637 -39205513 - AluSx SINE Alu -1 311 1 23 0 0 0 chr5 160424874 160424897 -39205253 + AT_rich Low_complexity Low_complexity 1 23 0 385 245 0 49 chr5 160424905 160425007 -39205143 - MER58C DNA MER1_type 0 215 119 186 224 0 0 chr5 160425023 160425072 -39205078 + CT-rich Low_complexity Low_complexity 2 50 0 624 159 9 18 chr5 160425094 160425207 -39204943 - MER58C DNA MER1_type -103 112 1 38 61 0 0 chr5 160425224 160425290 -39204860 + AT_rich Low_complexity Low_complexity 1 66 0 1974 115 23 13 chr5 160425331 160425635 -39204515 - AluSx SINE Alu -5 307 1 404 202 0 0 chr5 160426075 160426150 -39204000 - AluJ/FLAM SINE Alu -242 60 2 243 225 14 0 chr5 160426150 160426221 -39203929 - HAL1 LINE L1 -170 2337 2266 * 375 277 21 53 chr5 160426212 160426400 -39203750 - HAL1 LINE L1 -2323 184 3 869 138 0 0 chr5 160426841 160426964 -39203186 + FLAM_C SINE Alu 1 123 -20 286 279 67 19 chr5 160427349 160427560 -39202590 - L1MC4a LINE L1 -362 5802 5689 2245 79 3 35 chr5 160427586 160427901 -39202249 - AluSx SINE Alu -7 305 1 437 279 184 0 chr5 160427902 160428049 -39202101 - MER20B DNA MER1_type -609 174 1 471 274 64 44 chr5 160428049 160428253 -39201897 - L1MC4a LINE L1 -465 5656 5449 183 194 71 122 chr5 160428264 160428362 -39201788 + MIR3 SINE MIR 115 207 -1 400 278 57 26 chr5 160428572 160428795 -39201355 - L1MC4a LINE L1 -1850 5958 5726 2250 82 7 0 chr5 160428795 160429089 -39201061 - AluY SINE Alu -15 296 1 2267 101 7 0 chr5 160429236 160429544 -39200606 + AluY SINE Alu 1 310 -1 21 0 0 0 chr5 160429545 160429566 -39200584 + AT_rich Low_complexity Low_complexity 1 21 0 2077 136 0 0 chr5 160429594 160429895 -39200255 + AluSx SINE Alu 1 301 -11 1958 125 14 14 chr5 160430126 160430423 -39199727 - AluSx SINE Alu -15 297 1 321 261 36 79 chr5 160430493 160430658 -39199492 - L1ME3A LINE L1 -48 6122 5965 2718 211 39 50 chr5 160430685 160430919 -39199231 - MER82 DNA MER2_type 0 653 418 1893 104 60 11 chr5 160430919 160431211 -39198939 - AluSg SINE Alu 0 305 1 2718 211 39 50 chr5 160431211 160431517 -39198633 - MER82 DNA MER2_type -235 418 118 1478 98 74 5 chr5 160431517 160431732 -39198418 + MER30 DNA MER1_type 1 230 0 2718 211 39 50 chr5 160431732 160431849 -39198301 - MER82 DNA MER2_type -535 118 1 1058 217 93 22 chr5 160431883 160432060 -39198090 - L1ME3A LINE L1 -215 5955 5792 2194 118 0 6 chr5 160432060 160432374 -39197776 - AluSx SINE Alu 0 312 1 1058 217 93 22 chr5 160432374 160432490 -39197660 - L1ME3A LINE L1 -378 5792 5636 2021 161 24 0 chr5 160432490 160432826 -39197324 - MER2 DNA MER2_type 0 344 1 1058 217 93 22 chr5 160432826 160432844 -39197306 - L1ME3A LINE L1 -534 5636 5621 1742 167 14 7 chr5 160433328 160433622 -39196528 + AluJo SINE Alu 3 298 -14 285 208 0 19 chr5 160434473 160434526 -39195624 + MER94 DNA DNA 83 134 0 23 54 0 0 chr5 160434853 160434890 -39195260 + AT_rich Low_complexity Low_complexity 1 37 0 28 29 0 0 chr5 160435676 160435711 -39194439 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 160436182 160436203 -39193947 + AT_rich Low_complexity Low_complexity 1 21 0 34 24 0 0 chr5 160436574 160436615 -39193535 + AT_rich Low_complexity Low_complexity 1 41 0 418 125 0 0 chr5 160440869 160440949 -39189201 - AluS SINE Alu 0 309 230 1000 129 0 0 chr5 160440950 160441089 -39189061 - AluSq/x SINE Alu -174 139 1 452 190 253 0 chr5 160441690 160441848 -39188302 + MER112 DNA MER1_type 15 212 -48 204 240 0 0 chr5 160441962 160442012 -39188138 + T-rich Low_complexity Low_complexity 1 50 0 2280 87 7 0 chr5 160442222 160442521 -39187629 - AluSg SINE Alu -9 301 1 494 296 62 6 chr5 160443164 160443343 -39186807 - MIR SINE MIR -72 190 2 2007 116 0 0 chr5 160445222 160445556 -39184594 + AluSx SINE Alu 34 367 0 25 0 0 0 chr5 160445878 160445903 -39184247 + AT_rich Low_complexity Low_complexity 1 25 0 1912 142 14 0 chr5 160445988 160446283 -39183867 - AluSx SINE Alu -13 299 1 359 279 123 36 chr5 160446440 160446659 -39183491 - MIR SINE MIR -24 238 1 775 206 11 54 chr5 160446708 160446892 -39183258 - AluJb SINE Alu 0 312 137 251 247 21 93 chr5 160446895 160446992 -39183158 + MIR SINE MIR 103 192 -70 2361 72 3 13 chr5 160447388 160447694 -39182456 + AluY SINE Alu 1 303 -8 1953 124 0 0 chr5 160447912 160448179 -39181971 + AluSx SINE Alu 1 267 -45 5051 120 11 38 chr5 160448774 160449667 -39180483 - L1PB3 LINE L1 -7 6147 5272 759 149 0 8 chr5 160449673 160449794 -39180356 - AluSq/x SINE Alu -193 120 2 2231 109 0 7 chr5 160449806 160450110 -39180040 - AluSx SINE Alu -10 302 1 466 224 0 17 chr5 160450110 160450226 -39179924 - L1P LINE L1 -815 5331 5218 583 151 0 0 chr5 160452763 160452849 -39177301 - AluS SINE Alu -225 88 3 31 0 0 0 chr5 160452851 160452882 -39177268 + AT_rich Low_complexity Low_complexity 1 31 0 658 274 168 13 chr5 160453379 160453605 -39176545 - MIR SINE MIR 0 262 2 23 33 0 0 chr5 160454634 160454664 -39175486 + AT_rich Low_complexity Low_complexity 1 30 0 651 211 57 97 chr5 160455302 160455529 -39174621 - MIR SINE MIR 0 262 45 33 0 0 0 chr5 160455661 160455694 -39174456 + AT_rich Low_complexity Low_complexity 1 33 0 2043 120 0 10 chr5 160456481 160456781 -39173369 - AluSx SINE Alu -15 297 1 904 270 40 20 chr5 160457772 160458024 -39172126 + MIR SINE MIR 6 262 0 429 265 73 6 chr5 160458252 160458427 -39171723 + L1ME3A LINE L1 5769 5957 -213 286 222 16 32 chr5 160459431 160459494 -39170656 - MIR SINE MIR -196 66 5 1985 123 0 0 chr5 160459626 160459960 -39170190 - AluSg SINE Alu 0 310 1 2026 138 0 6 chr5 160461017 160461328 -39168822 - AluSg SINE Alu -1 309 1 257 216 194 22 chr5 160462204 160462338 -39167812 - L1ME4a LINE L1 -28 6093 5937 26 50 0 0 chr5 160462463 160462503 -39167647 + AT_rich Low_complexity Low_complexity 1 40 0 2058 132 3 0 chr5 160462555 160462865 -39167285 - AluSq SINE Alu -2 311 1 189 247 140 32 chr5 160463038 160463131 -39167019 - MIR SINE MIR -97 165 63 472 68 27 0 chr5 160463682 160463755 -39166395 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 748 273 31 34 chr5 160463756 160463985 -39166165 + L1ME4a LINE L1 5599 5828 -293 2215 107 0 7 chr5 160463985 160464295 -39165855 + AluSx SINE Alu 1 308 -4 748 273 31 34 chr5 160464295 160464421 -39165729 + L1ME4a LINE L1 5828 5953 -168 274 222 37 0 chr5 160464574 160464628 -39165522 + L2 LINE L2 3001 3056 -257 2161 96 3 13 chr5 160464863 160465165 -39164985 - AluSq SINE Alu -14 299 1 664 259 0 12 chr5 160465446 160465608 -39164542 - MIR SINE MIR -81 181 22 2049 126 0 3 chr5 160465608 160465910 -39164240 - AluSx SINE Alu -11 301 1 1406 123 162 8 chr5 160466693 160466946 -39163204 + AluSg SINE Alu 1 292 -8 243 0 0 0 chr5 160467134 160467161 -39162989 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 2140 116 0 3 chr5 160467166 160467477 -39162673 + AluSq SINE Alu 1 310 -3 2001 119 0 0 chr5 160468030 160468325 -39161825 - AluSx SINE Alu -17 295 1 767 41 0 0 chr5 160468354 160468451 -39161699 + L1PA4 LINE L1 6059 6155 0 1905 86 0 54 chr5 160468473 160468752 -39161398 - AluSg SINE Alu -46 264 1 686 190 0 15 chr5 160468776 160468913 -39161237 - L1PB4 LINE L1 -3 6153 6019 186 248 188 30 chr5 160469161 160469262 -39160888 - MIR SINE MIR -2 260 144 21 0 0 0 chr5 160469804 160469825 -39160325 + AT_rich Low_complexity Low_complexity 1 21 0 432 230 0 0 chr5 160470165 160470252 -39159898 + MIR SINE MIR 144 230 -32 182 146 171 0 chr5 160470227 160470268 -39159882 + L2 LINE L2 3251 3298 -15 * 11117 114 25 72 chr5 160470410 160471019 -39159131 + Tigger1 DNA MER2_type 588 1224 -1194 559 242 17 0 chr5 160471019 160471139 -39159011 + FLAM_A SINE Alu 1 122 -20 11117 114 25 72 chr5 160471139 160472329 -39157821 + Tigger1 DNA MER2_type 1224 2415 -3 619 239 34 45 chr5 160472380 160472556 -39157594 - MER117 DNA MER1_type -23 174 1 1831 114 48 0 chr5 160473843 160474138 -39156012 + AluSx SINE Alu 1 308 0 22 35 0 0 chr5 160474705 160474734 -39155416 + AT_rich Low_complexity Low_complexity 1 29 0 524 250 50 8 chr5 160474734 160474854 -39155296 + L2 LINE L2 3118 3242 -30 279 270 96 66 chr5 160474882 160475206 -39154944 + L2 LINE L2 2765 3094 -178 202 244 163 23 chr5 160475236 160475322 -39154828 - L2 LINE L2 0 3272 3175 241 316 0 60 chr5 160475396 160475466 -39154684 - L2 LINE L2 -245 3068 3006 2160 114 0 3 chr5 160475466 160475773 -39154377 + AluSq SINE Alu 1 306 -7 241 316 0 60 chr5 160475773 160475819 -39154331 - L2 LINE L2 -307 3006 2959 290 376 35 0 chr5 160475845 160475930 -39154220 + L2 LINE L2 3163 3250 -22 358 270 305 30 chr5 160476276 160476468 -39153682 - MIR SINE MIR -4 258 8 910 176 22 44 chr5 160476468 160476597 -39153553 + MER45A DNA AcHobo 1 126 -1455 2213 82 10 0 chr5 160476597 160476891 -39153259 - AluY SINE Alu -14 297 1 910 176 22 44 chr5 160476891 160476943 -39153207 + MER45A DNA AcHobo 126 178 0 180 111 0 0 chr5 160478194 160478221 -39151929 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 873 221 49 118 chr5 160478244 160478652 -39151498 - L2 LINE L2 -50 3263 2884 752 255 217 17 chr5 160478885 160479175 -39150975 - L2 LINE L2 0 3313 2966 1960 125 3 0 chr5 160479230 160479518 -39150632 - AluSx SINE Alu -3 309 21 571 293 137 17 chr5 160479523 160479924 -39150226 + L2 LINE L2 2693 3144 -169 230 169 0 14 chr5 160482107 160482178 -39147972 + T-rich Low_complexity Low_complexity 3 72 0 531 240 118 57 chr5 160482275 160482504 -39147646 + MIR SINE MIR 1 243 -19 375 308 8 34 chr5 160482514 160482631 -39147519 + MIR SINE MIR 79 192 -70 295 277 53 0 chr5 160482658 160482752 -39147398 + L2 LINE L2 3172 3270 -2 328 283 43 10 chr5 160482876 160483003 -39147147 - MIR3 SINE MIR -27 181 49 439 273 191 77 chr5 160483492 160483906 -39146244 + L2 LINE L2 2853 3313 0 223 270 40 27 chr5 160483901 160483975 -39146175 - MIR3 SINE MIR -15 193 119 * 807 305 16 16 chr5 160484554 160484803 -39145347 + MIR SINE MIR 2 250 -12 196 228 25 63 chr5 160484846 160484925 -39145225 - L2 LINE L2 -1 3312 3237 324 0 0 0 chr5 160485065 160485101 -39145049 + (TAA)n Simple_repeat Simple_repeat 2 37 0 286 259 59 12 chr5 160485203 160485288 -39144862 + MER5A DNA MER1_type 101 189 0 267 295 196 0 chr5 160485398 160485510 -39144640 + L2 LINE L2 3132 3265 -7 351 0 0 0 chr5 160485603 160485642 -39144508 + (TG)n Simple_repeat Simple_repeat 1 39 0 244 274 198 57 chr5 160486501 160486658 -39143492 - MIR3 SINE MIR -7 201 23 250 297 59 10 chr5 160486771 160486872 -39143278 + L2 LINE L2 3149 3254 -18 522 278 89 5 chr5 160486982 160487173 -39142977 - MIR SINE MIR -10 252 46 210 329 88 22 chr5 160487210 160487347 -39142803 - MIR SINE MIR -14 248 103 207 317 0 0 chr5 160487746 160487806 -39142344 + GA-rich Low_complexity Low_complexity 3 62 0 209 260 0 0 chr5 160487878 160487928 -39142222 + L2 LINE L2 3223 3272 0 * 397 272 87 12 chr5 160487927 160488096 -39142054 + MIR SINE MIR 75 261 -1 387 0 0 0 chr5 160488532 160488575 -39141575 + (TG)n Simple_repeat Simple_repeat 1 43 0 21 0 0 0 chr5 160488809 160488830 -39141320 + GC_rich Low_complexity Low_complexity 1 21 0 369 330 39 69 chr5 160491983 160492186 -39137964 + MIR SINE MIR 30 226 -36 279 189 75 0 chr5 160492385 160492438 -39137712 + L2 LINE L2 3237 3293 -20 301 190 35 0 chr5 160493496 160493554 -39136596 + MIR SINE MIR 82 141 -67 348 286 11 0 chr5 160493923 160494014 -39136136 + L2 LINE L2 3181 3272 0 532 240 167 25 chr5 160494373 160494577 -39135573 + MIR SINE MIR 20 252 -10 258 32 0 0 chr5 160495110 160495141 -39135009 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 327 269 13 0 chr5 160495295 160495373 -39134777 + L2 LINE L2 3192 3270 -2 693 213 37 61 chr5 160495379 160495618 -39134532 - MIR SINE MIR -1 261 24 423 0 0 0 chr5 160496444 160496491 -39133659 + (CA)n Simple_repeat Simple_repeat 2 48 0 219 279 51 25 chr5 160497207 160497286 -39132864 + MIR3 SINE MIR 85 165 -43 318 283 57 28 chr5 160497386 160497492 -39132658 - HAL1 LINE L1 -123 2384 2276 322 308 161 19 chr5 160497492 160497703 -39132447 - HAL1 LINE L1 -3 2504 2264 22 35 0 0 chr5 160497766 160497795 -39132355 + AT_rich Low_complexity Low_complexity 1 29 0 2062 96 41 3 chr5 160497823 160498115 -39132035 - AluSq SINE Alu -10 303 1 2206 97 0 6 chr5 160498491 160498802 -39131348 + AluSg SINE Alu 1 309 -1 436 310 88 41 chr5 160499099 160499270 -39130880 + MIR3 SINE MIR 7 163 -45 443 333 34 39 chr5 160499623 160499827 -39130323 + MIR3 SINE MIR 3 205 -3 2353 108 0 9 chr5 160500280 160500595 -39129555 + AluSx SINE Alu 1 312 0 185 174 43 22 chr5 160500998 160501044 -39129106 - MIR3 SINE MIR -5 203 157 1678 192 20 17 chr5 160501320 160501664 -39128486 - MLT1A1 LTR MaLR -11 354 10 478 184 0 0 chr5 160502023 160502110 -39128040 - AluJ/FRAM SINE Alu -9 303 217 1221 97 0 0 chr5 160502192 160502346 -39127804 + AluSq SINE Alu 17 170 -143 484 167 11 11 chr5 160502350 160502440 -39127710 - FRAM SINE Alu -78 98 9 302 241 105 45 chr5 160502521 160502654 -39127496 - MIR SINE MIR -92 170 30 354 290 38 15 chr5 160502707 160502838 -39127312 + L3 LINE CR1 1258 1391 -186 21 0 0 0 chr5 160503065 160503086 -39127064 + AT_rich Low_complexity Low_complexity 1 21 0 1598 160 89 24 chr5 160503197 160503490 -39126660 + AluJb SINE Alu 1 312 0 1361 165 4 29 chr5 160503651 160503894 -39126256 + AluJb SINE Alu 46 282 -30 2285 118 0 6 chr5 160504032 160504346 -39125804 + AluSx SINE Alu 1 312 0 1997 125 14 0 chr5 160504676 160504955 -39125195 + AluSx SINE Alu 17 299 -13 3947 125 32 38 chr5 160504989 160505537 -39124613 - L1MA8 LINE L1 -2 6289 5744 1833 140 14 21 chr5 160505537 160505823 -39124327 - AluJb SINE Alu -28 284 1 3947 125 32 38 chr5 160505823 160505984 -39124166 - L1MA8 LINE L1 -547 5744 5584 225 333 45 9 chr5 160506103 160506214 -39123936 - L2 LINE L2 -5 3308 3194 189 0 0 0 chr5 160506490 160506511 -39123639 + (T)n Simple_repeat Simple_repeat 1 21 0 1814 253 63 38 chr5 160506946 160507482 -39122668 - HAL1 LINE L1 -10 2497 1941 2318 97 3 7 chr5 160507482 160507792 -39122358 - AluSg1 SINE Alu 0 309 1 1814 253 63 38 chr5 160507792 160507910 -39122240 - HAL1 LINE L1 -566 1941 1827 2630 249 96 70 chr5 160507955 160508192 -39121958 - HAL1 LINE L1 -1123 1384 1155 1908 168 76 12 chr5 160508192 160508598 -39121552 - MSTB1 LTR MaLR 0 432 1 2630 249 96 70 chr5 160508598 160508719 -39121431 - HAL1 LINE L1 -1352 1155 1039 1693 177 3 28 chr5 160508719 160509036 -39121114 - AluJo SINE Alu -3 309 1 2630 249 96 70 chr5 160509036 160509255 -39120895 - HAL1 LINE L1 -1468 1039 827 1877 167 10 10 chr5 160509255 160509566 -39120584 - AluSx SINE Alu -1 311 1 2630 249 96 70 chr5 160509566 160510334 -39119816 - HAL1 LINE L1 -1680 827 1 553 342 53 15 chr5 160510796 160511062 -39119088 - Charlie8 DNA MER1_type -2141 276 1 303 49 0 0 chr5 160511241 160511282 -39118868 + (TG)n Simple_repeat Simple_repeat 1 41 0 324 70 0 0 chr5 160511284 160511327 -39118823 + (GA)n Simple_repeat Simple_repeat 2 44 0 2254 115 3 7 chr5 160511506 160511811 -39118339 + AluSq SINE Alu 1 304 -9 995 149 0 0 chr5 160511827 160511975 -39118175 + MER3 DNA MER1_type 2 149 -60 1101 207 9 36 chr5 160512574 160512796 -39117354 - MER58A DNA MER1_type -8 216 1 405 0 0 0 chr5 160513024 160513069 -39117081 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 1715 139 37 0 chr5 160513673 160513918 -39116232 + AluSx SINE Alu 1 254 -58 243 322 23 18 chr5 160513955 160514126 -39116024 - L2 LINE L2 -152 3161 2990 540 252 14 0 chr5 160514186 160514329 -39115821 - MIR SINE MIR -94 168 24 180 0 0 0 chr5 160514333 160514353 -39115797 + (TCCC)n Simple_repeat Simple_repeat 4 23 0 21 0 0 0 chr5 160514651 160514672 -39115478 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr5 160514698 160514726 -39115424 + AT_rich Low_complexity Low_complexity 1 28 0 383 288 22 22 chr5 160515482 160515621 -39114529 + MIR SINE MIR 70 208 -54 199 333 123 15 chr5 160515714 160515909 -39114241 + L2 LINE L2 2524 2739 -575 212 250 0 0 chr5 160516082 160516130 -39114020 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 1269 251 60 33 chr5 160516132 160516586 -39113564 - L1MC4a LINE L1 -1849 5959 5494 215 299 52 39 chr5 160516990 160517067 -39113083 - L2 LINE L2 -40 3232 3155 971 115 0 0 chr5 160517234 160517364 -39112786 - AluSq SINE Alu -11 302 173 1392 102 6 0 chr5 160517550 160517726 -39112424 - AluSq SINE Alu -136 177 1 294 148 0 0 chr5 160517751 160517805 -39112345 + (TTCC)n Simple_repeat Simple_repeat 1 54 0 2072 122 3 0 chr5 160518298 160518585 -39111565 - AluSp SINE Alu -25 288 1 23 0 0 0 chr5 160519145 160519168 -39110982 + AT_rich Low_complexity Low_complexity 1 23 0 226 214 0 0 chr5 160519524 160519566 -39110584 + GA-rich Low_complexity Low_complexity 1 42 0 2217 96 3 0 chr5 160520022 160520330 -39109820 + AluSp SINE Alu 1 309 0 697 252 103 8 chr5 160520544 160520778 -39109372 + MIR SINE MIR 1 256 -6 278 260 110 0 chr5 160521830 160521930 -39108220 + MIR SINE MIR 149 259 -3 1226 101 22 22 chr5 160522465 160522643 -39107507 + AluSc SINE Alu 127 304 -5 236 275 12 62 chr5 160522922 160523002 -39107148 + MER5B DNA MER1_type 61 136 -42 2442 63 3 3 chr5 160523129 160523429 -39106721 - AluY SINE Alu -11 300 1 385 277 0 18 chr5 160523729 160523841 -39106309 + MIR SINE MIR 81 190 -72 202 331 101 7 chr5 160524373 160524512 -39105638 - L2 LINE L2 -2 3270 3119 1280 139 25 10 chr5 160524512 160524713 -39105437 - AluJb SINE Alu -16 296 93 2075 145 0 0 chr5 160524765 160525061 -39105089 + AluSx SINE Alu 1 296 -16 260 214 31 71 chr5 160525166 160525264 -39104886 + L1ME4a LINE L1 5956 6049 -72 284 0 28 0 chr5 160525268 160525304 -39104846 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 1794 133 3 79 chr5 160525314 160525644 -39104506 - AluJb SINE Alu -4 308 4 655 278 50 46 chr5 160525786 160526067 -39104083 - LTR16C LTR ERVL 0 491 210 290 318 114 45 chr5 160526257 160526565 -39103585 + L3 LINE CR1 613 941 -636 206 296 91 0 chr5 160526837 160526925 -39103225 + L3 LINE CR1 1147 1242 -335 2018 145 3 6 chr5 160526967 160527278 -39102872 + AluJo SINE Alu 3 312 0 298 277 34 17 chr5 160527406 160527525 -39102625 + MIR SINE MIR 117 237 -25 410 267 77 31 chr5 160527562 160527757 -39102393 + L3 LINE CR1 1278 1481 -96 291 245 170 0 chr5 160528413 160528507 -39101643 + MIR SINE MIR 32 141 -67 1613 166 20 47 chr5 160528548 160528844 -39101306 - AluJo SINE Alu -24 288 1 195 281 78 0 chr5 160528864 160528928 -39101222 - L2 LINE L2 -54 3218 3150 2238 100 21 0 chr5 160529069 160529358 -39100792 - AluSx SINE Alu -17 295 1 304 177 94 42 chr5 160529419 160529515 -39100635 + MER113 DNA MER1_type? 1 101 -420 2074 113 3 7 chr5 160530939 160531276 -39098874 + AluSg SINE Alu 1 336 0 2290 121 0 9 chr5 160531306 160531621 -39098529 + AluSx SINE Alu 1 312 0 1302 170 182 80 chr5 160531743 160532167 -39097983 - MLT1C LTR MaLR 0 467 1 417 296 187 30 chr5 160532332 160532599 -39097551 + L1ME4a LINE L1 5562 5873 -297 2133 125 0 3 chr5 160532626 160532922 -39097228 - AluJb SINE Alu -17 295 1 2073 134 0 13 chr5 160533041 160533348 -39096802 - AluSx SINE Alu -9 303 1 2591 160 29 23 chr5 160533535 160533666 -39096484 + L1MB7 LINE L1 5668 5797 -387 2262 96 30 0 chr5 160533666 160533969 -39096181 + AluSq SINE Alu 1 312 -1 2591 160 29 23 chr5 160533969 160534350 -39095800 + L1MB7 LINE L1 5797 6183 -1 2122 113 0 23 chr5 160534412 160534714 -39095436 - AluSg SINE Alu -15 295 1 293 246 33 25 chr5 160534770 160534892 -39095258 + L1ME4a LINE L1 5988 6110 -11 22 35 0 0 chr5 160534945 160534974 -39095176 + AT_rich Low_complexity Low_complexity 1 29 0 3020 128 0 11 chr5 160534976 160535444 -39094706 - L1PB1 LINE L1 -3 6148 5686 308 321 161 13 chr5 160535465 160535689 -39094461 - MIR SINE MIR 0 262 6 837 150 0 30 chr5 160537116 160537249 -39092901 + FLAM_C SINE Alu 1 129 -14 1266 307 124 45 chr5 160537358 160538578 -39091572 + L2 LINE L2 1744 3059 -213 215 257 208 10 chr5 160538694 160538795 -39091355 + L2 LINE L2 3147 3267 -5 212 353 58 0 chr5 160538797 160538936 -39091214 + L3b LINE CR1 1263 1409 -174 407 271 167 9 chr5 160539189 160539399 -39090751 + L2 LINE L2 1017 1259 -2055 4097 240 104 80 chr5 160539684 160540438 -39089712 + L2 LINE L2 1018 1752 -1561 723 157 9 0 chr5 160540438 160540553 -39089597 - FLAM_C SINE Alu -25 118 3 4097 240 104 80 chr5 160540553 160541868 -39088282 + L2 LINE L2 1752 3256 -57 1293 153 9 5 chr5 160541868 160542084 -39088066 - MER20 DNA MER1_type -1 218 2 4097 240 104 80 chr5 160542084 160542143 -39088007 + L2 LINE L2 3256 3312 -1 589 177 122 61 chr5 160542597 160542778 -39087372 - MIR SINE MIR -14 248 57 21 0 0 0 chr5 160542808 160542829 -39087321 + AT_rich Low_complexity Low_complexity 1 21 0 255 250 109 0 chr5 160545116 160545208 -39084942 + L2 LINE L2 3171 3272 0 204 294 16 62 chr5 160545819 160546001 -39084149 - MIR SINE MIR -50 212 40 1961 142 3 7 chr5 160547173 160547476 -39082674 - AluJb SINE Alu -10 302 1 649 235 78 9 chr5 160547481 160547711 -39082439 - MIR SINE MIR -11 251 6 332 320 41 0 chr5 160547954 160548076 -39082074 + MIR SINE MIR 66 192 -70 424 239 26 52 chr5 160548436 160548591 -39081559 - MIR SINE MIR -30 232 82 419 283 89 33 chr5 160548847 160549027 -39081123 + L2 LINE L2 2513 2702 -612 23 0 0 0 chr5 160549043 160549066 -39081084 + AT_rich Low_complexity Low_complexity 1 23 0 677 227 39 70 chr5 160549735 160549964 -39080186 + LTR1B LTR ERV1 1 222 -604 * 1564 197 101 105 chr5 160549955 160550639 -39079511 + LTR1B LTR ERV1 95 982 -38 566 318 59 30 chr5 160551055 160551508 -39078642 + L2 LINE L2 2713 3217 -96 205 250 0 0 chr5 160551528 160551568 -39078582 + polypurine Low_complexity Low_complexity 2 41 0 796 253 57 71 chr5 160551621 160552028 -39078122 + LTR16A1 LTR ERVL 48 448 -9 345 271 0 25 chr5 160553052 160553170 -39076980 + L2 LINE L2 3158 3272 0 479 322 58 12 chr5 160553181 160553255 -39076895 + MIR SINE MIR 16 85 -177 1940 102 0 36 chr5 160553255 160553529 -39076621 - AluSx SINE Alu -12 300 37 479 322 58 12 chr5 160553529 160553625 -39076525 + MIR SINE MIR 85 194 -68 21 57 0 0 chr5 160554032 160554067 -39076083 + AT_rich Low_complexity Low_complexity 1 35 0 801 202 83 10 chr5 160554865 160555058 -39075092 + AluJo SINE Alu 83 289 -23 2183 103 0 0 chr5 160555081 160555363 -39074787 + AluSq SINE Alu 2 283 -30 279 0 0 0 chr5 160555366 160555397 -39074753 + (CATA)n Simple_repeat Simple_repeat 2 32 0 295 274 193 14 chr5 160555489 160555701 -39074449 + MIR SINE MIR 7 256 -6 216 309 0 0 chr5 160555908 160555963 -39074187 + L2 LINE L2 3228 3282 -31 2286 104 0 3 chr5 160556059 160556366 -39073784 - AluSg SINE Alu -4 306 1 450 261 175 45 chr5 160556422 160556690 -39073460 - MLT1K LTR MaLR -86 502 200 2097 185 50 45 chr5 160556801 160557363 -39072787 - MER74B LTR ERVL 0 622 58 234 176 0 0 chr5 160557437 160557488 -39072662 + (TTCA)n Simple_repeat Simple_repeat 1 51 0 343 297 44 0 chr5 160557507 160557598 -39072552 - L2 LINE L2 -6 3266 3172 228 67 0 0 chr5 160557639 160557669 -39072481 + (TCTA)n Simple_repeat Simple_repeat 3 32 0 1831 150 0 0 chr5 160557680 160557947 -39072203 - AluJo SINE Alu -45 267 1 487 297 73 0 chr5 160558165 160558330 -39071820 - MIR SINE MIR -50 212 36 1113 215 106 45 chr5 160558407 160558803 -39071347 - MER113 DNA MER1_type? -95 426 7 318 286 70 76 chr5 160559723 160560068 -39070082 + L1ME4a LINE L1 5613 5956 -165 1200 78 0 6 chr5 160560068 160560234 -39069916 + L1PA13 LINE L1 5994 6158 -5 318 286 70 76 chr5 160560234 160560399 -39069751 + L1ME4a LINE L1 5956 6120 -1 456 286 143 62 chr5 160561189 160561448 -39068702 + L2 LINE L2 2985 3264 -8 217 379 30 0 chr5 160561583 160561649 -39068501 - L3 LINE CR1 -96 1481 1414 330 320 157 0 chr5 160562439 160562586 -39067564 + MIR SINE MIR 91 260 -2 10062 191 126 51 chr5 160562666 160563654 -39066496 - Zaphod DNA AcHobo -81 3950 3037 1947 114 7 0 chr5 160563654 160563944 -39066206 + L1PA14 LINE L1 5870 6161 0 10062 191 126 51 chr5 160563944 160563955 -39066195 - Zaphod DNA AcHobo -994 3037 3028 2443 84 0 0 chr5 160563955 160564264 -39065886 - AluSg SINE Alu -1 309 1 10062 191 126 51 chr5 160564264 160564937 -39065213 - Zaphod DNA AcHobo -1003 3028 2407 2040 113 0 20 chr5 160564937 160565239 -39064911 - AluSx SINE Alu -16 296 1 10062 191 126 51 chr5 160565239 160566349 -39063801 - Zaphod DNA AcHobo -1624 2407 1381 2993 20 6 0 chr5 160566349 160566697 -39063453 + L1PA4 LINE L1 5806 6155 0 10062 191 126 51 chr5 160566697 160567581 -39062569 - Zaphod DNA AcHobo -2650 1381 7 258 32 0 0 chr5 160567726 160567757 -39062393 + (CA)n Simple_repeat Simple_repeat 2 32 0 1446 122 44 0 chr5 160567757 160567962 -39062188 - AluSg/x SINE Alu -14 296 83 349 287 97 50 chr5 160567962 160568120 -39062030 - L1ME4a LINE L1 -162 5959 5783 2208 128 0 0 chr5 160568120 160568418 -39061732 - AluSx SINE Alu -14 298 1 349 287 97 50 chr5 160568418 160568517 -39061633 - L1ME4a LINE L1 -338 5783 5690 28 0 0 0 chr5 160568575 160568603 -39061547 + AT_rich Low_complexity Low_complexity 1 28 0 46 54 0 0 chr5 160568866 160568940 -39061210 + AT_rich Low_complexity Low_complexity 1 74 0 180 0 0 0 chr5 160569025 160569045 -39061105 + (TG)n Simple_repeat Simple_repeat 2 21 0 2185 206 44 52 chr5 160569403 160569962 -39060188 + L1ME1 LINE L1 5523 6078 -88 2388 100 0 0 chr5 160569962 160570262 -39059888 - AluSx SINE Alu -12 300 1 2185 206 44 52 chr5 160570262 160570339 -39059811 + L1ME1 LINE L1 6078 6154 -12 1893 158 10 3 chr5 160571307 160571604 -39058546 + AluJb SINE Alu 1 299 -13 210 196 20 0 chr5 160571605 160571656 -39058494 + (TA)n Simple_repeat Simple_repeat 1 52 0 1871 164 0 35 chr5 160572143 160572460 -39057690 + AluJb SINE Alu 1 306 -6 257 351 0 7 chr5 160572483 160572631 -39057519 + HAL1b LINE L1 277 423 -925 1211 154 154 47 chr5 160573471 160573672 -39056478 + MLT2B1 LTR ERVL 1 250 -270 1840 121 7 65 chr5 160573672 160573978 -39056172 + AluSx SINE Alu 1 288 -24 1211 154 154 47 chr5 160573978 160574095 -39056055 + MLT2B1 LTR ERVL 250 353 -167 1042 116 0 0 chr5 160574095 160574233 -39055917 + AluSg/x SINE Alu 156 293 -17 2802 228 70 77 chr5 160574370 160574530 -39055620 + L1MC4 LINE L1 6348 6508 -1534 1804 174 17 0 chr5 160574530 160574829 -39055321 + AluJo SINE Alu 1 304 -8 2802 228 70 77 chr5 160574829 160576278 -39053872 + L1MC4 LINE L1 6508 8041 -1 606 255 184 4 chr5 160576406 160576661 -39053489 - MLT1L LTR MaLR 0 615 315 848 179 87 43 chr5 160577717 160577924 -39052226 + MER20 DNA MER1_type 4 219 0 345 298 141 55 chr5 160578765 160579184 -39050966 - L2 LINE L2 0 3313 2859 1978 152 0 0 chr5 160579414 160579711 -39050439 + AluSx SINE Alu 1 297 -15 340 319 86 12 chr5 160580897 160581060 -39049090 - MIR SINE MIR -8 254 80 206 143 29 0 chr5 160581226 160581261 -39048889 + (CA)n Simple_repeat Simple_repeat 1 36 0 2048 133 3 10 chr5 160581527 160581829 -39048321 - AluJb SINE Alu -12 300 1 361 202 56 22 chr5 160582285 160582374 -39047776 - MIR SINE MIR -2 260 169 5743 79 10 37 chr5 160582374 160583209 -39046941 - L1PA13 LINE L1 -2 6161 5350 2396 83 3 10 chr5 160583209 160583510 -39046640 + AluSp SINE Alu 1 299 -14 5743 79 10 37 chr5 160583510 160583576 -39046574 - L1PA13 LINE L1 -813 5350 5284 626 217 29 14 chr5 160583576 160583714 -39046436 - MIR SINE MIR -83 179 40 4003 52 2 0 chr5 160584054 160584558 -39045592 - LTR10C LTR ERV1 0 591 87 1413 41 0 0 chr5 160584558 160584729 -39045421 - L1PA4 LINE L1 -1 6154 5984 1297 34 0 6 chr5 160584729 160584905 -39045245 + L1P LINE L1 5156 5330 -816 680 53 0 11 chr5 160584905 160584999 -39045151 - LTR10C LTR ERV1 -498 93 1 228 67 0 0 chr5 160585105 160585135 -39045015 + U2 snRNA snRNA 4 33 -155 245 111 0 0 chr5 160585509 160585545 -39044605 - MADE1 DNA Mariner -3 77 42 683 346 70 15 chr5 160585595 160585922 -39044228 + L2 LINE L2 2430 2774 -540 466 310 78 16 chr5 160586143 160586388 -39043762 + MIR SINE MIR 3 262 0 273 348 169 8 chr5 160586390 160586508 -39043642 + L2 LINE L2 3136 3272 0 504 238 62 44 chr5 160586753 160586913 -39043237 + MIR3 SINE MIR 45 207 -1 23 0 0 0 chr5 160587872 160587895 -39042255 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 160588326 160588350 -39041800 + AT_rich Low_complexity Low_complexity 1 24 0 379 199 66 81 chr5 160588644 160588740 -39041410 - L1MD3 LINE L1 -5 7990 7895 2080 125 17 3 chr5 160588740 160589035 -39041115 - AluSp SINE Alu -8 305 7 379 199 66 81 chr5 160589035 160589074 -39041076 - L1MD3 LINE L1 -100 7895 7857 635 42 58 0 chr5 160589084 160589204 -39040946 + (TA)n Simple_repeat Simple_repeat 1 127 0 826 144 0 0 chr5 160589209 160589327 -39040823 - FLAM_C SINE Alu -25 118 1 1545 197 57 9 chr5 160589329 160589679 -39040471 - L1MD3 LINE L1 -158 7837 7471 558 134 0 0 chr5 160589697 160589779 -39040371 - AluSp SINE Alu -189 124 43 340 291 14 43 chr5 160589786 160589996 -39040154 + L1MC5 LINE L1 7009 7212 -749 536 216 24 0 chr5 160590036 160590161 -39039989 - MER94 DNA DNA -5 129 2 262 304 54 0 chr5 160590307 160590419 -39039731 + L1MC5 LINE L1 7259 7376 -585 254 256 108 39 chr5 160590481 160590610 -39039540 + L1MC4 LINE L1 7596 7733 -309 814 165 0 0 chr5 160590752 160590944 -39039206 + FLAM_C SINE Alu 1 192 0 213 276 0 17 chr5 160591164 160591222 -39038928 - MER5A DNA MER1_type -65 124 68 566 78 29 10 chr5 160591314 160591417 -39038733 + (TC)n Simple_repeat Simple_repeat 1 105 0 291 335 145 18 chr5 160592096 160592323 -39037827 - MIR SINE MIR -5 257 2 1042 251 20 4 chr5 160594215 160594470 -39035680 + MIR SINE MIR 2 260 -2 1507 198 31 6 chr5 160594714 160595037 -39035113 - MLT1A1 LTR MaLR -2 363 33 354 319 79 29 chr5 160595147 160595286 -39034864 - MIR SINE MIR -60 148 2 516 300 74 43 chr5 160595536 160595766 -39034384 + MIR SINE MIR 26 262 0 223 268 16 16 chr5 160596225 160596348 -39033802 + (TA)n Simple_repeat Simple_repeat 1 123 0 2183 107 17 7 chr5 160596412 160596711 -39033439 - AluSx SINE Alu -10 302 1 1649 179 7 13 chr5 160596920 160597222 -39032928 - AluJo SINE Alu -12 300 1 1244 192 91 84 chr5 160597361 160597420 -39032730 - L1MB7 LINE L1 -1 6165 6108 1809 153 11 4 chr5 160597420 160597726 -39032424 + AluSx SINE Alu 1 308 0 1244 192 91 84 chr5 160597726 160598018 -39032132 - L1MB7 LINE L1 -58 6108 5780 2289 52 21 0 chr5 160598018 160598307 -39031843 - AluY SINE Alu -16 295 1 1244 192 91 84 chr5 160598307 160598420 -39031730 - L1MB7 LINE L1 -386 5780 5669 713 299 42 4 chr5 160598437 160598678 -39031472 + MIR SINE MIR 11 260 -2 25 0 0 0 chr5 160598972 160598997 -39031153 + AT_rich Low_complexity Low_complexity 1 25 0 404 233 50 166 chr5 160600172 160600481 -39029669 - MIR SINE MIR 0 262 2 235 300 62 39 chr5 160601442 160601572 -39028578 - L2 LINE L2 -1 3312 3180 344 286 67 9 chr5 160601600 160601705 -39028445 - MIR SINE MIR -72 136 26 187 273 0 18 chr5 160602031 160602086 -39028064 + MIR SINE MIR 101 154 -108 * 426 244 160 13 chr5 160602085 160602241 -39027909 + MIR SINE MIR 58 236 -26 377 328 52 8 chr5 160602438 160602572 -39027578 - L2 LINE L2 -279 3034 2895 271 234 117 13 chr5 160602715 160602792 -39027358 - MIR SINE MIR 0 262 178 259 289 104 30 chr5 160603036 160603171 -39026979 - MIR SINE MIR -24 238 94 2010 136 0 16 chr5 160603495 160603803 -39026347 - AluSx SINE Alu -9 303 1 397 105 0 0 chr5 160603896 160603953 -39026197 + (G)n Simple_repeat Simple_repeat 1 57 0 623 260 135 16 chr5 160604450 160604762 -39025388 - L1MC4 LINE L1 -6 8036 7688 907 142 0 0 chr5 160604814 160604948 -39025202 + FLAM_C SINE Alu 1 134 -9 817 224 85 92 chr5 160604952 160605074 -39025076 - L1MC4 LINE L1 -404 7638 7517 1897 109 42 58 chr5 160605074 160605387 -39024763 + AluSc SINE Alu 1 308 -1 817 224 85 92 chr5 160605387 160605698 -39024452 - L1MC4 LINE L1 -525 7517 7208 1979 133 0 3 chr5 160605727 160606057 -39024093 - AluSx SINE Alu 0 329 1 313 307 0 0 chr5 160608092 160608180 -39021970 - L1ME4a LINE L1 -67 6054 5967 21 0 0 0 chr5 160608496 160608517 -39021633 + AT_rich Low_complexity Low_complexity 1 21 0 1113 152 157 0 chr5 160608718 160608935 -39021215 - MER68 LTR ERV1 -311 251 1 2156 126 0 7 chr5 160609000 160609310 -39020840 - AluSx SINE Alu -4 308 1 2176 98 0 7 chr5 160609315 160609637 -39020513 - AluSx SINE Alu 0 320 1 2067 120 0 20 chr5 160609638 160609938 -39020212 - AluSx SINE Alu -18 294 1 522 267 0 0 chr5 160610140 160610349 -39019801 + (CCCCAG)n Simple_repeat Simple_repeat 1 209 0 185 317 12 37 chr5 160610951 160611033 -39019117 - L2 LINE L2 -262 3010 2931 222 118 0 0 chr5 160611483 160611517 -39018633 + (T)n Simple_repeat Simple_repeat 1 34 0 26 0 0 0 chr5 160612873 160612899 -39017251 + AT_rich Low_complexity Low_complexity 1 26 0 30 0 0 0 chr5 160613780 160613810 -39016340 + AT_rich Low_complexity Low_complexity 1 30 0 627 275 180 9 chr5 160615290 160615512 -39014638 - MIR SINE MIR -1 261 2 317 333 106 28 chr5 160615800 160615941 -39014209 - MIR3 SINE MIR -51 157 6 394 318 73 10 chr5 160616426 160616618 -39013532 + L3 LINE CR1 1191 1394 -183 2286 66 42 0 chr5 160616909 160617198 -39012952 + AluSp SINE Alu 1 301 -12 23 33 0 0 chr5 160620072 160620102 -39010048 + AT_rich Low_complexity Low_complexity 1 30 0 685 207 0 9 chr5 160621346 160621462 -39008688 - FLAM_A SINE Alu -18 115 1 2494 57 0 3 chr5 160622577 160622873 -39007277 - AluSc SINE Alu -14 295 1 13570 123 35 42 chr5 160623211 160623678 -39006472 + Tigger1 DNA MER2_type 3 472 -1946 243 0 0 0 chr5 160623678 160623705 -39006445 + (TG)n Simple_repeat Simple_repeat 2 28 0 2212 106 0 0 chr5 160623705 160623989 -39006161 - AluY SINE Alu -27 284 1 13570 123 35 42 chr5 160623989 160625954 -39004196 + Tigger1 DNA MER2_type 470 2418 0 206 238 0 0 chr5 160625959 160626001 -39004149 + T-rich Low_complexity Low_complexity 2 43 0 763 253 94 0 chr5 160626045 160626310 -39003840 - L1MC5 LINE L1 -400 7561 7272 1033 198 39 5 chr5 160626332 160626539 -39003611 + MER20 DNA MER1_type 6 219 0 1004 196 166 76 chr5 160626545 160626579 -39003571 - L1MC5 LINE L1 -742 7219 7189 831 57 122 0 chr5 160626579 160626702 -39003448 + MER85 DNA T2_type 1 138 -1 1004 196 166 76 chr5 160626702 160627130 -39003020 - L1MC5 LINE L1 -772 7189 6715 487 226 79 33 chr5 160627727 160627760 -39002390 - L1MDb LINE L1 -5076 1454 1424 1350 146 98 49 chr5 160627760 160628047 -39002103 - AluJo SINE Alu -11 301 1 487 226 79 33 chr5 160628047 160628334 -39001816 - L1MDb LINE L1 -5106 1424 1121 2040 132 7 23 chr5 160629056 160629366 -39000784 - AluJb SINE Alu -7 305 1 21 0 0 0 chr5 160631361 160631382 -38998768 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 160632331 160632352 -38997798 + AT_rich Low_complexity Low_complexity 1 21 0 308 309 82 0 chr5 160632378 160632488 -38997662 - L1ME LINE L1 -298 5823 5705 24 32 0 0 chr5 160632724 160632755 -38997395 + AT_rich Low_complexity Low_complexity 1 31 0 1029 274 177 38 chr5 160635926 160636704 -38993446 + L2 LINE L2 2381 3269 -44 2007 131 0 3 chr5 160636933 160637254 -38992896 - AluSx SINE Alu 0 320 1 6369 148 45 28 chr5 160637822 160638056 -38992094 + L1MA5A LINE L1 4052 4281 -2016 1922 125 7 50 chr5 160638056 160638359 -38991791 + AluSx SINE Alu 5 294 -18 6369 148 45 28 chr5 160638359 160638729 -38991421 + L1MA5A LINE L1 4281 4643 -1654 1584 161 57 4 chr5 160638729 160639009 -38991141 + AluJo SINE Alu 6 300 -12 6369 148 45 28 chr5 160639009 160640617 -38989533 + L1MA5A LINE L1 4643 6294 -3 378 120 0 0 chr5 160641478 160641528 -38988622 - Tigger7 DNA MER2_type -2 2485 2436 1282 246 214 22 chr5 160641651 160642412 -38987738 - HAL1 LINE L1 -810 1697 791 835 119 17 0 chr5 160642426 160642544 -38987606 - AluJb SINE Alu -192 120 1 472 170 259 0 chr5 160642604 160642716 -38987434 + MER20 DNA MER1_type 3 143 -76 372 259 254 0 chr5 160642750 160642935 -38987215 - HAL1 LINE L1 -1753 754 523 900 211 100 19 chr5 160642995 160643286 -38986864 - MER58B DNA MER1_type 0 341 7 528 275 81 54 chr5 160643349 160643644 -38986506 - HAL1 LINE L1 -2110 397 95 24 32 0 0 chr5 160644354 160644385 -38985765 + AT_rich Low_complexity Low_complexity 1 31 0 270 320 81 27 chr5 160645404 160645626 -38984524 + L1MC4 LINE L1 7665 7898 -144 892 163 182 20 chr5 160646419 160646622 -38983528 - MER46A DNA MER2_type 0 236 1 1943 82 4 0 chr5 160647132 160647375 -38982775 + AluSg SINE Alu 1 244 -66 582 280 159 5 chr5 160647499 160647902 -38982248 - L1ME LINE L1 -4983 1401 937 908 203 71 11 chr5 160647946 160648128 -38982022 - AluJo SINE Alu -23 289 97 2018 115 20 14 chr5 160648129 160648425 -38981725 - AluSx SINE Alu -8 304 7 1336 206 94 0 chr5 160648429 160648706 -38981444 - AluJb SINE Alu -9 303 1 425 236 98 40 chr5 160648708 160648933 -38981217 - L1ME LINE L1 -5313 1059 822 350 263 45 26 chr5 160649314 160649470 -38980680 - L1ME LINE L1 -6199 364 206 27 0 0 0 chr5 160649549 160649576 -38980574 + AT_rich Low_complexity Low_complexity 1 27 0 25 90 0 0 chr5 160651292 160651359 -38978791 + AT_rich Low_complexity Low_complexity 1 67 0 1521 181 62 7 chr5 160652000 160652288 -38977862 + AluJo SINE Alu 3 306 -6 22 70 0 0 chr5 160652327 160652370 -38977780 + AT_rich Low_complexity Low_complexity 1 43 0 2304 91 7 3 chr5 160653147 160653445 -38976705 - AluSq SINE Alu -4 309 11 29 28 0 0 chr5 160654360 160654396 -38975754 + AT_rich Low_complexity Low_complexity 1 36 0 1555 111 12 66 chr5 160655943 160656024 -38974126 + MER30 DNA MER1_type 1 85 -145 2230 89 7 0 chr5 160656024 160656315 -38973835 + AluSx SINE Alu 1 293 -19 1555 111 12 66 chr5 160656315 160656476 -38973674 + MER30 DNA MER1_type 85 230 0 286 370 31 0 chr5 160656484 160656611 -38973539 + L2 LINE L2 2606 2736 -578 180 330 76 107 chr5 160656702 160657027 -38973123 + L2 LINE L2 2824 3132 -140 2282 99 23 0 chr5 160657027 160657330 -38972820 - AluSx SINE Alu -2 310 1 180 330 76 107 chr5 160657330 160657464 -38972686 + L2 LINE L2 3132 3269 -3 3010 158 54 35 chr5 160657643 160658268 -38971882 - L1MA7 LINE L1 -12 6279 5643 360 253 46 0 chr5 160660078 160660165 -38969985 + MIR SINE MIR 154 244 -18 189 0 0 0 chr5 160661578 160661599 -38968551 + (A)n Simple_repeat Simple_repeat 1 21 0 22 80 0 0 chr5 160663197 160663247 -38966903 + AT_rich Low_complexity Low_complexity 1 50 0 1281 181 58 48 chr5 160663480 160663773 -38966377 - AluJo SINE Alu -16 296 1 611 150 20 0 chr5 160667841 160667941 -38962209 - MER5A DNA MER1_type -87 102 1 23 0 0 0 chr5 160668325 160668348 -38961802 + AT_rich Low_complexity Low_complexity 1 23 0 1473 182 0 89 chr5 160668365 160668689 -38961461 + AluJo SINE Alu 2 296 -16 253 220 0 120 chr5 160669616 160669639 -38960511 - L1MC4 LINE L1 0 8042 8018 2213 116 0 3 chr5 160669639 160669940 -38960210 + AluSx SINE Alu 3 302 -10 253 220 0 120 chr5 160669940 160670016 -38960134 - L1MC4 LINE L1 -24 8018 7955 2214 82 0 17 chr5 160670023 160670315 -38959835 - AluY SINE Alu -24 287 1 264 128 21 21 chr5 160670317 160670364 -38959786 - MLT1A1 LTR MaLR -315 50 4 1336 201 46 19 chr5 160670778 160671102 -38959048 + L1ME1 LINE L1 5721 6053 -113 242 140 40 20 chr5 160671105 160671155 -38958995 + L1MB7 LINE L1 6134 6184 0 1531 102 165 16 chr5 160671258 160671513 -38958637 - AluSg SINE Alu -6 304 12 438 20 0 0 chr5 160671891 160671942 -38958208 + (TA)n Simple_repeat Simple_repeat 1 51 0 315 0 0 0 chr5 160671941 160671976 -38958174 + (CA)n Simple_repeat Simple_repeat 2 36 0 * 362 308 71 50 chr5 160672168 160672350 -38957800 - MIR SINE MIR -12 250 65 726 164 0 8 chr5 160672350 160672484 -38957666 + Tigger1 DNA MER2_type 341 473 -1945 189 0 0 0 chr5 160672484 160672505 -38957645 + (TG)n Simple_repeat Simple_repeat 2 22 0 711 272 12 24 chr5 160672510 160672756 -38957394 - AluSg1 SINE Alu -26 283 41 185 194 0 0 chr5 160672982 160673013 -38957137 + MIR SINE MIR 61 91 -171 465 262 37 126 chr5 160673163 160673434 -38956716 - L2 LINE L2 -16 3256 3010 2866 13 0 3 chr5 160674287 160674603 -38955547 - AluYb8 SINE Alu -3 315 1 229 308 19 19 chr5 160674692 160674799 -38955351 - MIR3 SINE MIR -15 193 87 520 104 13 0 chr5 160675568 160675645 -38954505 - L1MB8 LINE L1 -6 6172 6095 1707 151 54 91 chr5 160677019 160677371 -38952779 - MER2 DNA MER2_type -1 343 5 349 187 53 0 chr5 160677372 160677447 -38952703 + L1MA9 LINE L1 6231 6309 -3 390 299 193 0 chr5 160677494 160677681 -38952469 - MIR SINE MIR -3 259 37 2237 119 0 0 chr5 160677931 160678234 -38951916 + AluSc SINE Alu 1 303 -6 1813 156 25 0 chr5 160678279 160678562 -38951588 - AluSx SINE Alu -22 290 1 2267 175 38 31 chr5 160679089 160679541 -38950609 - MLT1C LTR MaLR -12 455 1 578 300 93 12 chr5 160679926 160680173 -38949977 - Tigger8 DNA MER2_type -370 296 30 2144 65 49 0 chr5 160680225 160680488 -38949662 + AluY SINE Alu 22 297 -14 534 214 19 0 chr5 160680602 160680705 -38949445 + MER5A DNA MER1_type 8 112 -77 501 294 33 43 chr5 160680764 160680948 -38949202 + MIR SINE MIR 1 182 -80 4153 140 128 7 chr5 160681110 160681847 -38948303 + LTR1B LTR ERV1 1 826 0 2719 151 33 23 chr5 160682116 160682554 -38947596 - Charlie1b DNA MER1_type -2240 521 76 2309 106 0 3 chr5 160682554 160682856 -38947294 + AluSx SINE Alu 1 301 -11 2719 151 33 23 chr5 160682856 160682902 -38947248 - Charlie1b DNA MER1_type -2685 76 32 696 233 8 0 chr5 160683754 160683874 -38946276 + FLAM_A SINE Alu 2 122 -11 281 179 12 0 chr5 160683881 160683965 -38946185 + (TA)n Simple_repeat Simple_repeat 1 85 0 898 169 0 14 chr5 160683965 160684113 -38946037 + FRAM SINE Alu 1 140 -36 1836 136 38 3 chr5 160684194 160684361 -38945789 - AluSg SINE Alu -13 297 114 333 0 0 0 chr5 160684361 160684398 -38945752 + (TG)n Simple_repeat Simple_repeat 2 38 0 1836 136 38 3 chr5 160684398 160684517 -38945633 - AluSg SINE Alu -196 114 1 267 31 0 0 chr5 160684561 160684593 -38945557 + (TC)n Simple_repeat Simple_repeat 1 32 0 2065 132 7 0 chr5 160684593 160684889 -38945261 - AluSx SINE Alu -14 298 1 411 321 5 33 chr5 160685120 160685304 -38944846 - Charlie8 DNA MER1_type -2141 276 98 1393 49 0 0 chr5 160685308 160685471 -38944679 + L1PA8 LINE L1 6008 6170 -2 354 286 131 36 chr5 160686073 160686241 -38943909 + L2 LINE L2 2613 2796 -518 2167 112 27 0 chr5 160686275 160686569 -38943581 + AluSc SINE Alu 1 302 -7 1911 102 0 4 chr5 160686574 160686829 -38943321 + AluSg SINE Alu 40 293 -17 1944 153 0 7 chr5 160687182 160687482 -38942668 - AluJo SINE Alu -14 298 1 456 185 391 13 chr5 160687799 160687950 -38942200 + MER3 DNA MER1_type 2 209 0 2255 94 24 0 chr5 160687984 160688281 -38941869 + AluSx SINE Alu 1 304 -8 329 359 30 30 chr5 160688379 160688510 -38941640 + L2 LINE L2 2930 3060 -212 734 257 97 31 chr5 160690018 160690461 -38939689 - MLT1J LTR MaLR 0 511 3 287 266 84 77 chr5 160690497 160690766 -38939384 - L1MC4a LINE L1 -280 5884 5618 2286 98 3 7 chr5 160690766 160691072 -38939078 + AluSc SINE Alu 1 305 -4 287 266 84 77 chr5 160691072 160691130 -38939020 - L1MC4a LINE L1 -546 5618 5580 2251 99 24 0 chr5 160691130 160691424 -38938726 + AluSx SINE Alu 1 301 -11 287 266 84 77 chr5 160691424 160691484 -38938666 - L1MC4a LINE L1 -584 5580 5522 621 235 135 26 chr5 160691769 160691999 -38938151 - MIR SINE MIR -7 255 1 227 194 254 0 chr5 160692344 160692411 -38937739 + L2 LINE L2 2615 2698 -616 2194 118 3 3 chr5 160692431 160692735 -38937415 - AluSq SINE Alu -9 304 1 268 304 140 57 chr5 160692745 160693117 -38937033 + L2 LINE L2 2871 3273 -40 209 156 0 0 chr5 160693294 160693326 -38936824 - MIR SINE MIR -115 147 116 501 270 101 28 chr5 160694681 160694787 -38935363 - Charlie8 DNA MER1_type -131 199 73 1406 183 79 0 chr5 160694787 160694944 -38935206 - AluJo SINE Alu -11 301 158 216 0 0 0 chr5 160694944 160694968 -38935182 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1406 183 79 0 chr5 160694968 160695089 -38935061 - AluJo SINE Alu -154 158 1 501 270 101 28 chr5 160695089 160695160 -38934990 - Charlie8 DNA MER1_type -257 73 9 236 308 0 0 chr5 160695318 160695383 -38934767 + MIR3 SINE MIR 92 156 -52 497 284 148 16 chr5 160696107 160696290 -38933860 - MLT1I LTR MaLR 0 409 203 1965 138 0 3 chr5 160696379 160696662 -38933488 + AluSx SINE Alu 1 282 -30 347 255 137 0 chr5 160696868 160696970 -38933180 - MLT1I LTR MaLR -292 117 2 213 365 58 0 chr5 160697733 160697870 -38932280 + L2 LINE L2 2867 3011 -261 312 297 62 8 chr5 160698467 160698595 -38931555 + L2 LINE L2 3179 3313 0 1848 164 4 0 chr5 160698642 160698923 -38931227 + AluJb SINE Alu 5 286 -26 831 182 0 15 chr5 160698923 160699055 -38931095 - FLAM_A SINE Alu -3 130 1 809 137 0 0 chr5 160699447 160699571 -38930579 + AluSg/x SINE Alu 185 308 -4 280 292 21 10 chr5 160700298 160700394 -38929756 - MIR SINE MIR 0 262 166 545 271 40 7 chr5 160700778 160700929 -38929221 - MIR SINE MIR -94 168 13 355 290 75 75 chr5 160701680 160701769 -38928381 - MIR SINE MIR -32 230 142 2319 89 3 29 chr5 160701769 160702085 -38928065 - AluSq SINE Alu -1 312 5 355 290 75 75 chr5 160702085 160702195 -38927955 - MIR SINE MIR -119 143 31 562 253 74 88 chr5 160702658 160702943 -38927207 - MLT1K LTR MaLR 0 588 308 1634 182 61 0 chr5 160703232 160703529 -38926621 - MER58B DNA MER1_type 0 341 27 207 0 0 0 chr5 160703827 160703850 -38926300 + (T)n Simple_repeat Simple_repeat 1 23 0 26 0 0 0 chr5 160704499 160704525 -38925625 + AT_rich Low_complexity Low_complexity 1 26 0 2752 233 35 22 chr5 160705037 160705733 -38924417 - L1ME2 LINE L1 -9 6155 5451 1185 161 120 123 chr5 160705995 160706361 -38923789 - MLT1A1 LTR MaLR 0 365 1 618 267 182 0 chr5 160706448 160706684 -38923466 + HsTC2 DNA Tc2 505 783 -1115 26 30 0 0 chr5 160707544 160707577 -38922573 + AT_rich Low_complexity Low_complexity 1 33 0 2301 118 9 21 chr5 160707679 160708018 -38922132 - THE1B LTR MaLR 0 364 30 11337 100 5 3 chr5 160708018 160709520 -38920630 - THE1B-int LTR MaLR -75 1505 1 2367 155 28 19 chr5 160709520 160709881 -38920269 - THE1B LTR MaLR 0 364 1 1178 165 189 58 chr5 160709958 160710334 -38919816 + MSTC LTR MaLR 3 427 -1 398 269 120 6 chr5 160710350 160710517 -38919633 + MIR SINE MIR 60 245 -17 2141 123 10 3 chr5 160710964 160711266 -38918884 - AluSx SINE Alu -8 304 1 402 21 0 0 chr5 160711526 160711573 -38918577 + (TG)n Simple_repeat Simple_repeat 2 48 0 183 162 0 0 chr5 160711582 160711619 -38918531 + (TATG)n Simple_repeat Simple_repeat 2 38 0 207 281 83 21 chr5 160712454 160712550 -38917600 + MIR SINE MIR 88 189 -73 670 283 179 43 chr5 160712831 160713615 -38916535 - L2 LINE L2 0 3313 2445 247 191 0 0 chr5 160713886 160713933 -38916217 + MER103 DNA DNA 67 113 -53 328 247 247 6 chr5 160714170 160714332 -38915818 + MIR SINE MIR 48 248 -14 783 255 100 21 chr5 160714489 160714728 -38915422 - MIR SINE MIR -3 259 2 216 276 70 96 chr5 160714932 160715088 -38915062 + MIR SINE MIR 51 202 -60 586 210 153 44 chr5 160716067 160716296 -38913854 + MIR SINE MIR 5 258 -4 234 282 123 6 chr5 160716386 160716556 -38913594 + L2 LINE L2 3118 3307 -6 708 176 185 19 chr5 160717020 160717225 -38912925 - MER5C DNA MER1_type -82 242 4 347 287 81 44 chr5 160717680 160717705 -38912445 + MIR SINE MIR 13 36 -226 2142 129 0 0 chr5 160717705 160717991 -38912159 + AluSx SINE Alu 3 288 -24 347 287 81 44 chr5 160717991 160718101 -38912049 + MIR SINE MIR 36 153 -109 304 276 19 48 chr5 160718118 160718223 -38911927 - L2 LINE L2 -4 3268 3167 2191 122 0 0 chr5 160718515 160718810 -38911340 - AluSx SINE Alu -17 295 1 824 124 47 23 chr5 160719074 160719203 -38910947 - FLAM_C SINE Alu -1 132 1 1031 178 195 56 chr5 160719203 160719506 -38910644 + MLT1E1 LTR MaLR 2 346 -308 796 165 8 0 chr5 160719582 160719709 -38910441 + MLT1E1 LTR MaLR 527 654 0 217 367 97 68 chr5 160719931 160720179 -38909971 - L2 LINE L2 -16 3256 3002 1017 202 31 0 chr5 160720342 160720535 -38909615 + MER58A DNA MER1_type 26 224 0 2213 127 32 42 chr5 160720536 160720915 -38909235 + THE1C LTR MaLR 1 375 0 973 272 106 23 chr5 160720917 160721303 -38908847 + MLT1L LTR MaLR 146 563 -52 21 0 0 0 chr5 160721320 160721341 -38908809 + AT_rich Low_complexity Low_complexity 1 21 0 217 381 80 14 chr5 160721411 160721697 -38908453 - L2 LINE L2 -337 2977 2673 2256 142 27 15 chr5 160721698 160722030 -38908120 - MER1B DNA MER1_type -1 336 1 961 194 23 0 chr5 160722146 160722321 -38907829 + MER5A DNA MER1_type 11 189 0 7203 130 13 6 chr5 160722516 160723651 -38906499 - L1P LINE L1 -2047 4099 2957 4961 81 24 0 chr5 160723651 160724276 -38905874 + L1PA10 LINE L1 5521 6166 -2 2354 135 44 11 chr5 160724717 160725080 -38905070 + THE1C LTR MaLR 1 375 0 563 281 30 40 chr5 160725280 160725479 -38904671 + MER117 DNA MER1_type 1 197 0 433 256 77 24 chr5 160725495 160725663 -38904487 - MLT1K LTR MaLR -4 584 408 795 266 55 17 chr5 160725693 160725930 -38904220 - MIR SINE MIR 0 262 17 743 191 27 156 chr5 160725930 160726120 -38904030 + MER58A DNA MER1_type 1 214 -2206 2083 158 137 8 chr5 160726120 160726499 -38903651 - MSTA LTR MaLR 0 428 1 10432 135 9 35 chr5 160726501 160728119 -38902031 - MSTA-int LTR MaLR -2 1578 3 1407 198 81 35 chr5 160728121 160728469 -38901681 - THE1B LTR MaLR 0 364 1 743 191 27 156 chr5 160728469 160728529 -38901621 + MER58A DNA MER1_type 216 224 0 245 207 35 46 chr5 160729429 160729516 -38900634 - L1ME3A LINE L1 -1 6169 6084 744 276 118 0 chr5 160729685 160730000 -38900150 - L1ME3A LINE L1 -208 5962 5611 404 329 39 0 chr5 160730060 160730215 -38899935 - L1ME3A LINE L1 -532 5630 5470 659 324 144 9 chr5 160730618 160731069 -38899081 + L2 LINE L2 2326 2837 -477 243 277 48 36 chr5 160731695 160731778 -38898372 + MIR SINE MIR 34 117 -91 306 0 0 0 chr5 160732114 160732148 -38898002 + (TG)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr5 160732147 160732176 -38897974 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 3172 113 5 5 chr5 160732608 160733034 -38897116 - MSTA LTR MaLR -2 426 1 496 179 57 0 chr5 160734187 160734293 -38895857 - L2 LINE L2 -1 3312 3201 288 109 22 0 chr5 160734294 160734340 -38895810 - L2 LINE L2 -252 3061 3015 306 314 77 41 chr5 160734609 160734778 -38895372 + L2 LINE L2 2935 3109 -163 779 291 19 5 chr5 160734834 160735040 -38895110 - MIR SINE MIR -17 245 37 260 327 114 45 chr5 160735024 160735226 -38894924 + L2 LINE L2 3057 3272 0 * 238 270 175 22 chr5 160736063 160736200 -38893950 + MIR SINE MIR 99 256 -6 199 345 44 68 chr5 160736457 160736706 -38893444 + L2 LINE L2 3015 3257 -15 396 59 0 0 chr5 160736765 160736816 -38893334 + (CA)n Simple_repeat Simple_repeat 2 52 0 643 268 109 0 chr5 160736860 160737043 -38893107 + MIR SINE MIR 60 262 0 221 330 70 0 chr5 160737079 160737179 -38892971 + MIR SINE MIR 37 143 -65 263 305 131 11 chr5 160737331 160737485 -38892665 - MIR SINE MIR -65 143 16 558 189 0 0 chr5 160737624 160737714 -38892436 - 5S rRNA rRNA -31 90 1 220 242 48 16 chr5 160738922 160738984 -38891166 + MIR3 SINE MIR 95 158 -50 309 266 0 0 chr5 160739165 160739229 -38890921 - MER113 DNA MER1_type? -7 514 451 195 299 84 28 chr5 160739422 160739529 -38890621 - MIR SINE MIR -55 153 41 337 225 28 0 chr5 160739718 160739789 -38890361 + HsTC2 DNA Tc2 1 73 -1825 234 81 0 0 chr5 160741895 160741932 -38888218 + (T)n Simple_repeat Simple_repeat 1 37 0 243 329 61 12 chr5 160743006 160743088 -38887062 - MIR SINE MIR -146 116 31 558 307 78 14 chr5 160743261 160743479 -38886671 + MIR SINE MIR 20 251 -11 218 164 0 66 chr5 160743525 160743586 -38886564 + (TAAA)n Simple_repeat Simple_repeat 3 59 0 182 330 22 33 chr5 160744677 160744768 -38885382 + MIR SINE MIR 24 113 -149 768 254 250 32 chr5 160744896 160745674 -38884476 - L2 LINE L2 -2 3311 2293 479 299 22 43 chr5 160745750 160745934 -38884216 - L2 LINE L2 -1997 1317 1138 562 286 38 38 chr5 160746043 160746253 -38883897 - MIR SINE MIR -41 221 12 1199 226 14 0 chr5 160747513 160747734 -38882416 - MER58A DNA MER1_type 0 224 1 3453 284 231 22 chr5 160748380 160750415 -38879735 + L2 LINE L2 246 2705 -609 456 126 175 0 chr5 160750421 160750524 -38879626 + L1MB7 LINE L1 6044 6164 -20 1672 79 0 0 chr5 160751184 160751387 -38878763 - L1PA7 LINE L1 -4 6150 5948 218 197 0 82 chr5 160751519 160751580 -38878570 + L2 LINE L2 3172 3227 -86 2327 173 100 10 chr5 160752338 160752818 -38877332 - L1MB7 LINE L1 -11 6173 5651 1215 192 212 4 chr5 160752848 160753098 -38877052 + AluJo SINE Alu 1 302 0 407 160 117 11 chr5 160753114 160753208 -38876942 + MIR SINE MIR 39 142 -120 771 150 0 0 chr5 160753246 160753359 -38876791 - L1PB4 LINE L1 -7 6149 6037 257 236 255 0 chr5 160753772 160753878 -38876272 + L2 LINE L2 3170 3302 -11 402 211 0 0 chr5 160753950 160754026 -38876124 + MER116 DNA Mariner 5 80 0 224 266 234 0 chr5 160754554 160754648 -38875502 + MIR SINE MIR 31 146 -116 709 284 75 8 chr5 160755216 160755455 -38874695 - MIR SINE MIR -2 260 6 357 324 10 0 chr5 160755568 160755670 -38874480 - L2 LINE L2 -36 3236 3134 379 299 49 18 chr5 160756193 160756357 -38873793 - MIR SINE MIR -54 208 40 205 249 337 16 chr5 160756588 160756781 -38873369 - MIR SINE MIR -1 261 7 312 211 114 26 chr5 160756792 160756906 -38873244 + MIR3 SINE MIR 82 205 -3 724 195 20 27 chr5 160757087 160757236 -38872914 - MER20 DNA MER1_type -71 148 1 435 325 77 24 chr5 160757895 160758104 -38872046 + MIR SINE MIR 6 225 -37 1307 211 40 17 chr5 160759351 160759650 -38870500 - MER58B DNA MER1_type -35 306 1 195 355 23 65 chr5 160759861 160760046 -38870104 + MIR SINE MIR 26 202 -60 2083 115 36 0 chr5 160760046 160760325 -38869825 + AluSg SINE Alu 1 289 -21 195 355 23 65 chr5 160760325 160760353 -38869797 + MIR SINE MIR 202 230 -32 2127 206 80 2 chr5 160760387 160761012 -38869138 + L1P LINE L1 3562 4272 -1874 44150 29 21 2 chr5 160761017 160767045 -38863105 + L1HS LINE L1 7 6153 -2 6630 133 42 8 chr5 160767066 160769034 -38861116 + L1MA2 LINE L1 4255 6298 -6 308 337 0 0 chr5 160769062 160769160 -38860990 - L2 LINE L2 -7 3265 3168 2321 89 3 0 chr5 160769229 160769521 -38860629 - AluSx SINE Alu -14 298 6 2225 173 45 61 chr5 160769544 160770052 -38860098 + MLT1D LTR MaLR 1 500 -5 289 195 18 142 chr5 160770661 160770774 -38859376 - MER102a DNA MER1_type -19 311 213 1149 117 105 89 chr5 160770776 160771023 -38859127 + AluSx SINE Alu 62 312 0 347 267 141 0 chr5 160771027 160771162 -38858988 - MER102a DNA MER1_type -106 224 71 186 250 0 0 chr5 160771581 160771625 -38858525 - MIR SINE MIR -112 150 107 267 237 119 0 chr5 160772835 160772935 -38857215 - MIR SINE MIR -63 145 34 271 283 33 0 chr5 160773682 160773774 -38856376 + MIR SINE MIR 45 139 -69 413 280 125 6 chr5 160773845 160774013 -38856137 - MIR SINE MIR -71 191 4 828 307 42 13 chr5 160775868 160776246 -38853904 + L2 LINE L2 2413 2801 -513 192 355 28 14 chr5 160776338 160776479 -38853671 + L2 LINE L2 2829 2971 -343 295 239 188 22 chr5 160776491 160776629 -38853521 + L2 LINE L2 3153 3313 0 257 274 48 24 chr5 160777126 160777210 -38852940 - L2 LINE L2 -185 3087 3002 2314 167 36 42 chr5 160777211 160777715 -38852435 + MLT1D LTR MaLR 5 505 0 535 199 175 18 chr5 160779176 160779342 -38850808 + MIR SINE MIR 32 223 -39 2272 119 0 0 chr5 160779484 160779779 -38850371 - AluSx SINE Alu -17 295 1 288 219 0 16 chr5 160780229 160780293 -38849857 - L2 LINE L2 0 3272 3210 * 2036 275 60 34 chr5 160780286 160781261 -38848889 + L2 LINE L2 1877 2876 -438 265 274 9 9 chr5 160781261 160781374 -38848776 + CT-rich Low_complexity Low_complexity 3 115 0 1991 135 0 4 chr5 160781375 160781649 -38848501 - AluSx SINE Alu -39 273 1 206 250 48 65 chr5 160781828 160781952 -38848198 + L2 LINE L2 3099 3220 -93 508 290 52 10 chr5 160782007 160782200 -38847950 + MIR SINE MIR 36 236 -26 678 207 60 0 chr5 160782344 160782494 -38847656 - MIR SINE MIR -27 235 77 1965 144 30 77 chr5 160783580 160783984 -38846166 + MLT1B LTR MaLR 4 388 -2 580 259 128 39 chr5 160784091 160784427 -38845723 - L2 LINE L2 -86 3227 2862 1522 234 81 60 chr5 160785545 160785867 -38844283 + MLT2B1 LTR ERVL 6 344 -176 2047 149 0 0 chr5 160785867 160786169 -38843981 - AluSx SINE Alu -10 302 1 1522 234 81 60 chr5 160786169 160786350 -38843800 + MLT2B1 LTR ERVL 344 520 0 410 299 0 8 chr5 160786354 160786471 -38843679 + L2 LINE L2 3198 3313 0 460 294 66 28 chr5 160786579 160786790 -38843360 - MIR SINE MIR -12 250 32 734 106 38 8 chr5 160786802 160786934 -38843216 - L1PA13 LINE L1 0 6163 6028 222 286 152 18 chr5 160787321 160787433 -38842717 - L2 LINE L2 -7 3265 3139 182 372 0 0 chr5 160788404 160788490 -38841660 + L2 LINE L2 2935 3020 -252 964 196 43 19 chr5 160788788 160788997 -38841153 + MER20 DNA MER1_type 1 214 -5 314 296 201 6 chr5 160789376 160789555 -38840595 + L2 LINE L2 2530 2743 -571 316 298 67 0 chr5 160790083 160790187 -38839963 - MIR SINE MIR -78 130 20 539 282 57 32 chr5 160790447 160790695 -38839455 - MIR SINE MIR 0 262 9 276 218 0 105 chr5 160791197 160791321 -38838829 + MER113 DNA MER1_type? 32 142 -379 534 286 84 26 chr5 160792614 160792841 -38837309 - MIR SINE MIR -21 241 2 207 0 0 0 chr5 160793026 160793049 -38837101 + (T)n Simple_repeat Simple_repeat 1 23 0 1896 171 0 0 chr5 160794294 160794593 -38835557 + AluJb SINE Alu 1 299 -13 234 62 0 0 chr5 160794703 160794735 -38835415 + (GA)n Simple_repeat Simple_repeat 1 32 0 473 292 40 40 chr5 160794761 160794987 -38835163 - L2 LINE L2 -1 3312 3087 1723 87 25 4 chr5 160795027 160795268 -38834882 + L1PB1 LINE L1 5905 6150 -1 881 220 71 0 chr5 160795400 160795582 -38834568 - MER58A DNA MER1_type -25 199 5 258 105 0 0 chr5 160795754 160795792 -38834358 + (A)n Simple_repeat Simple_repeat 1 38 0 299 372 31 0 chr5 160796129 160796291 -38833859 + MIR SINE MIR 28 197 -65 273 335 110 32 chr5 160797330 160797548 -38832602 + L2 LINE L2 2818 3052 -220 216 97 0 0 chr5 160798358 160798389 -38831761 + (TG)n Simple_repeat Simple_repeat 2 32 0 256 299 14 83 chr5 160798423 160798567 -38831583 - MIR SINE MIR -122 140 7 235 240 67 0 chr5 160798613 160798688 -38831462 + MER113 DNA MER1_type? 50 129 -392 873 210 83 19 chr5 160799552 160799757 -38830393 + MLT1J2 LTR MaLR 3 220 -230 197 258 16 16 chr5 160799973 160800035 -38830115 + L2 LINE L2 2289 2350 -964 654 308 148 28 chr5 160800042 160800767 -38829383 - L2 LINE L2 -35 3278 2449 1983 158 0 16 chr5 160800958 160801268 -38828882 - AluSx SINE Alu -7 305 1 402 267 38 40 chr5 160801338 160801513 -38828637 + L1ME3A LINE L1 5983 6148 -14 301 164 75 0 chr5 160801530 160801597 -38828553 + L1ME3A LINE L1 6099 6170 0 352 246 55 27 chr5 160802809 160802919 -38827231 - MER94 DNA DNA -21 113 1 189 248 38 95 chr5 160803667 160803772 -38826378 + MIR SINE MIR 43 141 -67 247 330 133 36 chr5 160803861 160804273 -38825877 - L2 LINE L2 -3 3269 2818 465 280 175 0 chr5 160804536 160804747 -38825403 - MIR SINE MIR -10 252 5 398 301 68 18 chr5 160805730 160805893 -38824257 - MIR SINE MIR -80 182 12 426 179 26 0 chr5 160805908 160805986 -38824164 - MER116 DNA Mariner 0 80 1 270 215 76 18 chr5 160806236 160806363 -38823787 - MIR SINE MIR -68 140 3 440 224 75 14 chr5 160806843 160806990 -38823160 + L2 LINE L2 2958 3113 -200 423 282 62 86 chr5 160807004 160807213 -38822937 - MIR SINE MIR -46 216 13 781 252 30 72 chr5 160807665 160807900 -38822250 - L2 LINE L2 -186 3127 2909 2042 132 10 10 chr5 160807900 160808203 -38821947 - 7SLRNA srpRNA srpRNA -6 314 12 781 252 30 72 chr5 160808203 160808300 -38821850 - L2 LINE L2 -404 2909 2809 220 147 0 0 chr5 160809510 160809544 -38820606 - L2 LINE L2 -9 3304 3271 273 260 162 55 chr5 160810036 160810271 -38819879 + Charlie2 DNA MER1_type 1 260 -2522 1255 251 117 11 chr5 160810340 160810905 -38819245 + Charlie2 DNA MER1_type 2230 2854 -8 309 321 22 22 chr5 160810905 160811039 -38819111 + MIR SINE MIR 15 148 -114 605 321 23 0 chr5 160811107 160811322 -38818828 - MIR SINE MIR -10 252 33 295 232 146 0 chr5 160812318 160812400 -38817750 - L2 LINE L2 0 3313 3220 806 223 94 20 chr5 160812617 160812819 -38817331 + MER20 DNA MER1_type 1 217 -2 270 186 35 12 chr5 160812949 160813035 -38817115 + (TA)n Simple_repeat Simple_repeat 2 89 0 185 237 0 0 chr5 160813720 160813758 -38816392 - L3 LINE CR1 -11 1566 1529 272 275 0 0 chr5 160813940 160814009 -38816141 - MER5B DNA MER1_type -3 175 107 1027 160 17 0 chr5 160814016 160814191 -38815959 + MSTD LTR MaLR 218 395 -1 25 51 0 0 chr5 160814240 160814279 -38815871 + AT_rich Low_complexity Low_complexity 1 39 0 453 315 48 6 chr5 160814279 160814488 -38815662 + L1MC/D LINE L1 5219 5431 -731 759 294 20 16 chr5 160814541 160814796 -38815354 - MIR SINE MIR -5 257 2 11996 123 106 26 chr5 160815009 160815357 -38814793 - Tigger1 DNA MER2_type 0 2418 2099 2221 125 0 0 chr5 160815357 160815660 -38814490 - AluSg1 SINE Alu -6 303 1 11996 123 106 26 chr5 160815660 160817549 -38812601 - Tigger1 DNA MER2_type -319 2099 1 239 308 37 0 chr5 160817566 160817673 -38812477 + L1MC/D LINE L1 5699 5809 -1999 287 222 127 48 chr5 160818050 160818176 -38811974 - L3 LINE CR1 -212 1365 1230 223 247 112 45 chr5 160818380 160818469 -38811681 - L3 LINE CR1 -652 925 831 342 0 0 0 chr5 160818850 160818888 -38811262 + (CA)n Simple_repeat Simple_repeat 1 38 0 270 366 124 9 chr5 160819681 160820003 -38810147 - L3b LINE CR1 -123 1460 1102 406 296 122 21 chr5 160821155 160821344 -38808806 - MIR SINE MIR -2 260 53 364 301 0 21 chr5 160821627 160821720 -38808430 + L2 LINE L2 3178 3268 -4 295 311 61 61 chr5 160821758 160821906 -38808244 - MER5B DNA MER1_type 0 178 31 1101 219 118 25 chr5 160821922 160821988 -38808162 + MER113 DNA MER1_type? 2 60 -461 1991 142 4 0 chr5 160821988 160822310 -38807840 - AluSx SINE Alu 0 323 1 1101 219 118 25 chr5 160822310 160822716 -38807434 + MER113 DNA MER1_type? 60 519 -2 394 274 39 59 chr5 160823046 160823199 -38806951 - MIR SINE MIR 0 262 113 409 271 145 39 chr5 160825642 160825855 -38804295 - MIR SINE MIR -11 251 20 2125 112 4 0 chr5 160826460 160826769 -38803381 - AluSc SINE Alu 0 310 1 602 296 75 50 chr5 160827807 160828330 -38801820 + L2 LINE L2 2763 3305 -8 234 0 0 0 chr5 160829027 160829053 -38801097 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 1672 173 40 0 chr5 160829057 160829329 -38800821 - AluJb SINE Alu -29 283 1 185 179 0 51 chr5 160829356 160829395 -38800755 + L2 LINE L2 3184 3220 -93 * 211 321 36 0 chr5 160829363 160829419 -38800731 + L2 LINE L2 3148 3205 -67 14350 21 1 0 chr5 160829621 160832054 -38798096 + L1PA3 LINE L1 3717 6150 -5 686 263 61 19 chr5 160833972 160834185 -38795965 + MIR SINE MIR 30 251 -11 181 306 0 0 chr5 160834559 160834608 -38795542 - MER5B DNA MER1_type -58 120 72 232 246 0 0 chr5 160834722 160834779 -38795371 - L3 LINE CR1 -63 1514 1458 732 293 5 15 chr5 160834859 160835057 -38795093 + MIR SINE MIR 23 218 -44 304 290 45 12 chr5 160835913 160836046 -38794104 + MIR SINE MIR 15 150 -68 489 260 20 87 chr5 160836267 160836463 -38793687 + MER5A DNA MER1_type 7 189 0 182 219 152 133 chr5 160836497 160836602 -38793548 + L2 LINE L2 3179 3285 -28 458 254 14 70 chr5 160836693 160836835 -38793315 + MIR SINE MIR 11 144 -118 4090 219 82 22 chr5 160838594 160839602 -38790548 - L1M4b LINE L1 -5599 1260 192 408 329 15 7 chr5 160839983 160840120 -38790030 + MIR SINE MIR 4 141 -121 * 779 270 121 22 chr5 160840118 160840433 -38789717 - L2 LINE L2 0 3313 2968 360 244 70 9 chr5 160840423 160840538 -38789612 + MIR SINE MIR 141 262 0 * 201 121 0 0 chr5 160840979 160841012 -38789138 + (TG)n Simple_repeat Simple_repeat 2 34 0 184 290 16 0 chr5 160841185 160841247 -38788903 - MIR SINE MIR -73 189 127 605 309 88 10 chr5 160841372 160841576 -38788574 + MIR SINE MIR 5 224 -38 391 248 98 30 chr5 160841568 160841603 -38788547 + MIR SINE MIR 121 152 -110 * 1809 160 0 7 chr5 160841603 160841890 -38788260 + AluJb SINE Alu 14 298 -14 391 248 98 30 chr5 160841890 160841987 -38788163 + MIR SINE MIR 152 262 0 386 211 0 11 chr5 160841987 160842082 -38788068 + (CTA)n Simple_repeat Simple_repeat 1 94 0 249 57 0 0 chr5 160842212 160842247 -38787903 + (TG)n Simple_repeat Simple_repeat 1 35 0 346 312 71 22 chr5 160843012 160843221 -38786929 + MIR SINE MIR 41 260 -2 662 327 20 16 chr5 160844163 160844414 -38785736 - MIR SINE MIR -8 254 3 2697 82 6 0 chr5 160845110 160845463 -38784687 - THE1A LTR MaLR 0 355 1 11637 90 19 2 chr5 160845463 160847017 -38783133 - THE1A-int LTR MaLR 0 1580 1 2749 76 3 6 chr5 160847017 160847373 -38782777 - THE1A LTR MaLR 0 355 1 234 0 0 0 chr5 160847784 160847810 -38782340 + (A)n Simple_repeat Simple_repeat 1 26 0 1105 129 43 122 chr5 160847963 160848258 -38781892 + L1MA7 LINE L1 5886 6155 -16 863 179 20 26 chr5 160848264 160848459 -38781691 - L1PB4 LINE L1 0 6156 5963 831 123 37 6 chr5 160848459 160848622 -38781528 + L1MA7 LINE L1 6124 6291 0 787 305 65 4 chr5 160849237 160849483 -38780667 + MIR SINE MIR 2 262 0 378 292 103 77 chr5 160850039 160850234 -38779916 - L2 LINE L2 -30 3242 3043 444 253 118 34 chr5 160851602 160851780 -38778370 - MIR SINE MIR -62 200 8 371 369 107 19 chr5 160851873 160852247 -38777903 - L2 LINE L2 -4 3268 2862 246 268 0 0 chr5 160853229 160853285 -38776865 + MLT1J LTR MaLR 111 166 -345 * 646 263 74 82 chr5 160853261 160853664 -38776486 + MLT1L LTR MaLR 207 606 -9 262 299 63 155 chr5 160854735 160855006 -38775144 + L2 LINE L2 3000 3245 -27 377 274 26 35 chr5 160855461 160855574 -38774576 - L2 LINE L2 -19 3253 3142 960 115 8 184 chr5 160856392 160856626 -38773524 + 7SK RNA RNA 1 193 0 3745 267 114 18 chr5 160856660 160857161 -38772989 - L2 LINE L2 0 3313 2862 622 120 40 0 chr5 160857161 160857261 -38772889 + L1MB3 LINE L1 6077 6180 -3 3745 267 114 18 chr5 160857261 160858329 -38771821 - L2 LINE L2 -451 2862 1598 239 340 28 0 chr5 160858582 160858688 -38771462 + CT-rich Low_complexity Low_complexity 2 110 0 183 319 0 29 chr5 160859204 160859273 -38770877 - MIR SINE MIR -6 256 190 515 301 78 5 chr5 160859299 160859518 -38770632 - MIR SINE MIR -12 250 16 272 326 90 17 chr5 160859772 160859950 -38770200 + L2 LINE L2 3123 3313 0 268 208 19 0 chr5 160859969 160860022 -38770128 + L2 LINE L2 3004 3057 -215 248 331 0 123 chr5 160861831 160861961 -38768189 + L2 LINE L2 3134 3247 -25 1326 148 0 0 chr5 160861990 160862179 -38767971 + AluJb SINE Alu 106 294 -18 200 191 24 0 chr5 160862818 160862860 -38767290 - L2 LINE L2 -5 3267 3225 505 273 116 25 chr5 160862916 160863114 -38767036 + MIR SINE MIR 47 262 0 725 289 41 8 chr5 160863135 160863377 -38766773 + MIR SINE MIR 13 262 0 674 269 29 14 chr5 160863542 160863750 -38766400 + Charlie8 DNA MER1_type 57 267 -2150 224 219 0 96 chr5 160864450 160864523 -38765627 - L2 LINE L2 -13 3300 3235 288 224 0 0 chr5 160865518 160865576 -38764574 - L2 LINE L2 -2 3270 3213 815 229 61 19 chr5 160865735 160865949 -38764201 - MIR SINE MIR -37 225 3 381 282 105 55 chr5 160865962 160866197 -38763953 - MIR SINE MIR -13 249 4 258 329 31 93 chr5 160867614 160867775 -38762375 - MIR3 SINE MIR -27 181 31 243 299 128 17 chr5 160868081 160868198 -38761952 + L2 LINE L2 3139 3268 -4 767 248 31 47 chr5 160868324 160868486 -38761664 - MIR SINE MIR -6 256 98 1866 158 98 0 chr5 160868486 160868802 -38761348 + MER7A DNA MER2_type 2 346 0 767 248 31 47 chr5 160868802 160868893 -38761257 - MIR SINE MIR -164 98 7 183 287 81 103 chr5 160869772 160869946 -38760204 - MIR SINE MIR -79 183 14 180 254 113 0 chr5 160870746 160870817 -38759333 - MIR SINE MIR -48 214 136 * 1346 285 45 29 chr5 160870815 160871364 -38758786 + L2 LINE L2 2748 3312 -1 2433 82 0 3 chr5 160871700 160872006 -38758144 - AluY SINE Alu -6 305 1 484 174 0 18 chr5 160872275 160872384 -38757766 + CT-rich Low_complexity Low_complexity 4 110 0 1751 190 0 10 chr5 160872387 160872687 -38757463 - AluJb SINE Alu -15 297 1 547 143 31 20 chr5 160872715 160872813 -38757337 + MER53 DNA DNA 1 99 -90 504 294 35 0 chr5 160872836 160872979 -38757171 + MIR SINE MIR 115 262 0 313 279 12 0 chr5 160873710 160873796 -38756354 - L1ME4a LINE L1 -76 6045 5959 435 281 154 14 chr5 160874143 160874506 -38755644 + L1ME4a LINE L1 5708 6121 0 2335 78 0 3 chr5 160875280 160875576 -38754574 - AluY SINE Alu -16 295 1 241 232 123 29 chr5 160876034 160876172 -38753978 - L1ME4a LINE L1 -2 6119 5969 246 295 32 42 chr5 160876963 160877058 -38753092 - MIR SINE MIR 0 262 169 339 85 0 0 chr5 160877490 160877537 -38752613 + (TA)n Simple_repeat Simple_repeat 2 48 0 337 132 0 0 chr5 160877614 160877667 -38752483 - Charlie7 DNA MER1_type -2510 102 50 255 233 33 0 chr5 160877840 160877900 -38752250 - MIR SINE MIR -141 121 60 183 186 14 29 chr5 160878112 160878182 -38751968 + GA-rich Low_complexity Low_complexity 1 69 0 207 0 0 0 chr5 160878834 160878857 -38751293 + (T)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr5 160881227 160881248 -38748902 + AT_rich Low_complexity Low_complexity 1 21 0 551 286 133 55 chr5 160881626 160881934 -38748216 - MER102b DNA MER1_type -8 333 2 21 0 0 0 chr5 160883897 160883918 -38746232 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 160885153 160885177 -38744973 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 28 29 0 0 chr5 160887211 160887246 -38742904 + AT_rich Low_complexity Low_complexity 1 35 0 1654 145 0 4 chr5 160887246 160887495 -38742655 + AluJb SINE Alu 1 248 -64 2004 149 0 10 chr5 160937648 160937956 -38692194 + AluJo SINE Alu 1 305 -7 315 352 40 40 chr5 160937970 160938271 -38691879 + L1MC/D LINE L1 5451 5751 -2057 923 248 103 8 chr5 160938455 160938854 -38691296 + L1M4 LINE L1 2147 2583 -3563 369 286 51 57 chr5 160938852 160939027 -38691123 - L1ME3 LINE L1 -10 6152 5979 * 493 244 78 0 chr5 160939332 160939447 -38690703 + FLAM_A SINE Alu 5 128 -5 404 276 110 0 chr5 160939878 160940023 -38690127 + MIR SINE MIR 31 191 -71 1683 214 9 6 chr5 160940483 160940825 -38689325 - MLT1A1 LTR MaLR 0 365 23 1594 129 26 0 chr5 160941095 160941327 -38688823 - AluSx SINE Alu -74 238 1 342 298 51 11 chr5 160941659 160941837 -38688313 - MIR SINE MIR 0 262 78 1817 167 18 15 chr5 160941918 160942248 -38687902 + MER44D DNA MER2_type 1 601 -8 194 333 70 53 chr5 160942801 160942972 -38687178 + MER5A DNA MER1_type 16 189 0 274 218 0 0 chr5 160942974 160943029 -38687121 + Tigger5 DNA MER2_type 1 55 -2268 * 348 186 0 14 chr5 160942999 160943069 -38687081 + Tigger5 DNA MER2_type 2252 2320 -3 1120 122 53 11 chr5 160944349 160944538 -38685612 - MSTA LTR MaLR -231 197 1 1333 170 22 0 chr5 160944540 160944764 -38685386 - AluJo SINE Alu -81 231 3 26 0 0 0 chr5 160945117 160945143 -38685007 + AT_rich Low_complexity Low_complexity 1 26 0 2318 88 10 3 chr5 160945351 160945648 -38684502 - AluSq SINE Alu -14 299 1 402 248 116 23 chr5 160946148 160946277 -38683873 - MIR3 SINE MIR -21 187 47 221 317 73 0 chr5 160946458 160946540 -38683610 + MIR3 SINE MIR 110 197 -11 339 283 0 0 chr5 160946910 160947006 -38683144 + MIR SINE MIR 52 143 -65 324 276 153 12 chr5 160948006 160948176 -38681974 - MIR SINE MIR -6 256 63 2141 110 0 16 chr5 160948430 160948739 -38681411 + AluSg SINE Alu 1 304 -6 982 206 19 5 chr5 160948741 160948950 -38681200 - L1ME LINE L1 -583 5583 5372 1814 165 7 13 chr5 160950644 160950947 -38679203 + AluJb SINE Alu 1 301 -11 1922 145 3 3 chr5 160951088 160951370 -38678780 + AluSx SINE Alu 14 295 -17 2154 122 0 0 chr5 160952418 160952713 -38677437 - AluSx SINE Alu -16 296 2 2083 139 0 0 chr5 160952769 160953063 -38677087 + AluSx SINE Alu 11 304 -8 21 0 0 0 chr5 160953434 160953455 -38676695 + AT_rich Low_complexity Low_complexity 1 21 0 1243 203 68 14 chr5 160953495 160953790 -38676360 - AluJo SINE Alu -1 311 1 181 286 83 12 chr5 160953857 160953941 -38676209 + MIR SINE MIR 168 257 -5 719 197 1 0 chr5 160953948 160954089 -38676061 + Charlie5 DNA MER1_type 1 127 -2485 * 906 191 69 5 chr5 160954086 160954290 -38675860 + Charlie5 DNA MER1_type 2234 2450 -162 2280 92 0 20 chr5 160954291 160954597 -38675553 + AluSx SINE Alu 1 300 -12 206 246 0 14 chr5 160955229 160955298 -38674852 + (TTA)n Simple_repeat Simple_repeat 1 68 0 22 0 0 30 chr5 160955717 160955734 -38674416 + AT_rich Low_complexity Low_complexity 1 18 -14 2214 133 0 0 chr5 160955734 160956034 -38674116 + AluSx SINE Alu 1 300 -12 22 0 0 30 chr5 160956034 160956049 -38674101 + AT_rich Low_complexity Low_complexity 18 32 0 395 325 130 19 chr5 160956094 160956470 -38673680 + L1MC4a LINE L1 5496 5913 -1895 21 0 0 0 chr5 160958313 160958334 -38671816 + AT_rich Low_complexity Low_complexity 1 21 0 551 286 133 55 chr5 160958712 160959020 -38671130 - MER102b DNA MER1_type -8 333 2 21 0 0 0 chr5 160960983 160961004 -38669146 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 160962239 160962263 -38667887 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 28 29 0 0 chr5 160964297 160964332 -38665818 + AT_rich Low_complexity Low_complexity 1 35 0 1971 145 0 3 chr5 160964332 160964629 -38665521 + AluJb SINE Alu 1 296 -16 399 41 0 0 chr5 160964650 160964699 -38665451 + (TG)n Simple_repeat Simple_repeat 2 50 0 531 217 6 42 chr5 160964699 160964855 -38665295 - L1ME1 LINE L1 -32 6134 5980 266 268 0 0 chr5 160965707 160965763 -38664387 + MLT1J LTR MaLR 111 166 -345 * 336 133 10 174 chr5 160965739 160965837 -38664313 + MLT1L LTR MaLR 207 288 -327 537 257 136 52 chr5 160966075 160966347 -38663803 + MLT1L LTR MaLR 312 606 -9 250 315 110 55 chr5 160967435 160967689 -38662461 + L2 LINE L2 3019 3286 -27 373 274 26 35 chr5 160968144 160968257 -38661893 - L2 LINE L2 -19 3253 3142 960 115 8 184 chr5 160969076 160969310 -38660840 + 7SK RNA RNA 1 193 0 3735 268 114 18 chr5 160969344 160969845 -38660305 - L2 LINE L2 0 3313 2862 622 120 40 0 chr5 160969845 160969945 -38660205 + L1MB3 LINE L1 6077 6180 -3 3735 268 114 18 chr5 160969945 160971013 -38659137 - L2 LINE L2 -451 2862 1598 239 340 28 0 chr5 160971266 160971372 -38658778 + CT-rich Low_complexity Low_complexity 2 110 0 183 319 0 29 chr5 160971888 160971957 -38658193 - MIR SINE MIR -6 256 190 489 309 68 0 chr5 160971983 160972203 -38657947 - MIR SINE MIR -12 250 16 272 326 90 17 chr5 160972457 160972635 -38657515 + L2 LINE L2 3123 3313 0 268 208 19 0 chr5 160972654 160972707 -38657443 + L2 LINE L2 3004 3057 -215 248 331 0 123 chr5 160974516 160974646 -38655504 + L2 LINE L2 3134 3247 -25 1326 148 0 0 chr5 160974675 160974864 -38655286 + AluJb SINE Alu 106 294 -18 200 191 24 0 chr5 160975503 160975545 -38654605 - L2 LINE L2 -5 3267 3225 516 268 116 25 chr5 160975601 160975799 -38654351 + MIR SINE MIR 47 262 0 725 289 41 8 chr5 160975820 160976062 -38654088 + MIR SINE MIR 13 262 0 674 269 29 14 chr5 160976227 160976435 -38653715 + Charlie8 DNA MER1_type 46 256 -2161 224 219 0 96 chr5 160977135 160977208 -38652942 - L2 LINE L2 -13 3300 3235 288 224 0 0 chr5 160978203 160978261 -38651889 - L2 LINE L2 -2 3270 3213 815 229 61 19 chr5 160978420 160978634 -38651516 - MIR SINE MIR -37 225 3 381 282 105 55 chr5 160978647 160978882 -38651268 - MIR SINE MIR -13 249 4 573 301 188 58 chr5 160979358 160979704 -38650446 + L2 LINE L2 2882 3272 0 553 299 5 10 chr5 160979853 160980047 -38650103 + L1ME3 LINE L1 5961 6153 -9 348 219 114 9 chr5 160980436 160980541 -38649609 + L2 LINE L2 3194 3309 -4 433 253 118 34 chr5 160980634 160980812 -38649338 + MIR SINE MIR 8 200 -62 377 292 103 77 chr5 160982179 160982374 -38647776 + L2 LINE L2 3043 3242 -30 708 305 65 4 chr5 160982930 160983176 -38646974 - MIR SINE MIR 0 262 2 906 127 72 6 chr5 160983791 160983972 -38646178 - L1MA7 LINE L1 0 6291 6099 981 179 20 26 chr5 160983972 160984149 -38646001 + L1PB4 LINE L1 5963 6156 0 1228 137 40 117 chr5 160984164 160984471 -38645679 - L1MA7 LINE L1 -143 6148 5874 216 0 0 0 chr5 160984603 160984627 -38645523 + (T)n Simple_repeat Simple_repeat 1 24 0 2932 76 3 6 chr5 160985038 160985394 -38644756 + THE1A LTR MaLR 1 355 0 12404 90 19 2 chr5 160985394 160986948 -38643202 + THE1A-int LTR MaLR 1 1580 0 2879 82 6 0 chr5 160986948 160987301 -38642849 + THE1A LTR MaLR 1 355 0 649 327 20 16 chr5 160987997 160988248 -38641902 + MIR SINE MIR 3 254 -8 335 312 71 22 chr5 160989190 160989399 -38640751 - MIR SINE MIR -2 260 41 249 57 0 0 chr5 160990164 160990199 -38639951 + (CA)n Simple_repeat Simple_repeat 1 35 0 365 221 0 11 chr5 160990329 160990424 -38639726 + (TAG)n Simple_repeat Simple_repeat 1 94 0 379 248 98 30 chr5 160990424 160990521 -38639629 - MIR SINE MIR 0 262 152 1795 160 0 7 chr5 160990521 160990808 -38639342 - AluJb SINE Alu -14 298 14 379 248 98 30 chr5 160990808 160990843 -38639307 - MIR SINE MIR -110 152 121 * 594 309 88 10 chr5 160990835 160991039 -38639111 - MIR SINE MIR -38 224 5 181 290 16 0 chr5 160991164 160991226 -38638924 + MIR SINE MIR 127 189 -73 423 118 176 0 chr5 160991301 160991369 -38638781 + MADE1 DNA Mariner 1 80 0 230 274 81 57 chr5 160991559 160991683 -38638467 + L3 LINE CR1 634 760 -817 273 211 0 0 chr5 160992330 160992382 -38637768 - L2 LINE L2 -1 3312 3261 2862 90 8 16 chr5 160992418 160992796 -38637354 + THE1C LTR MaLR 1 375 0 574 269 128 9 chr5 160992799 160993018 -38637132 - MIR SINE MIR -1 261 17 1315 142 66 7 chr5 160993354 160993628 -38636522 - MER33 DNA MER1_type 0 324 35 296 302 113 0 chr5 160993870 160993976 -38636174 + L2 LINE L2 3154 3271 -1 199 302 16 48 chr5 160993999 160994062 -38636088 - MIR SINE MIR -194 68 8 1184 134 0 0 chr5 160994258 160994429 -38635721 + AluJb SINE Alu 137 307 -5 2568 59 0 0 chr5 160994579 160994882 -38635268 + AluY SINE Alu 1 303 -8 345 330 35 98 chr5 160995370 160995490 -38634660 - L2 LINE L2 -90 3182 3056 1599 192 10 17 chr5 160995490 160995782 -38634368 - AluJb SINE Alu -20 292 3 345 330 35 98 chr5 160995782 160996037 -38634113 - L2 LINE L2 -216 3056 2831 209 279 44 15 chr5 160996263 160996331 -38633819 + L2 LINE L2 3242 3311 -2 450 0 0 0 chr5 160997038 160997088 -38633062 + (CA)n Simple_repeat Simple_repeat 1 50 0 237 243 14 27 chr5 160997306 160997380 -38632770 + MER5A DNA MER1_type 2 74 -115 1045 83 0 0 chr5 160997382 160997515 -38632635 + AluSc SINE Alu 162 294 -15 456 274 0 10 chr5 160997515 160997617 -38632533 + MER5A DNA MER1_type 66 166 -23 2777 142 36 34 chr5 160999117 160999583 -38630567 + MLT1C LTR MaLR 1 467 0 22 0 0 0 chr5 161000085 161000107 -38630043 + AT_rich Low_complexity Low_complexity 1 22 0 492 48 0 0 chr5 161001615 161001678 -38628472 + (GA)n Simple_repeat Simple_repeat 2 64 0 250 268 37 37 chr5 161001705 161001787 -38628363 + MIR SINE MIR 32 113 -95 209 237 0 0 chr5 161002029 161002067 -38628083 + MIR SINE MIR 95 132 -76 2204 118 0 10 chr5 161002139 161002445 -38627705 + AluSg SINE Alu 1 303 -7 223 291 164 36 chr5 161003258 161003423 -38626727 - MIR SINE MIR -46 216 31 238 308 51 13 chr5 161003473 161003551 -38626599 + L2 LINE L2 3210 3290 -23 2276 257 28 5 chr5 161003843 161004407 -38625743 + MER119 DNA MER1_type 7 583 0 652 276 63 18 chr5 161004502 161004723 -38625427 - MIR SINE MIR -12 250 20 4384 152 49 79 chr5 161004733 161005875 -38624275 - L1MD1 LINE L1 -5 6237 5135 1603 226 51 58 chr5 161006015 161006062 -38624088 - L1MD1 LINE L1 -1052 5094 5048 2461 57 37 0 chr5 161006062 161006362 -38623788 - AluY SINE Alu 0 311 1 1603 226 51 58 chr5 161006362 161006864 -38623286 - L1MD1 LINE L1 -1098 5048 4549 448 246 131 29 chr5 161007103 161007278 -38622872 - Charlie8 DNA MER1_type -2141 276 84 220 338 38 50 chr5 161007360 161007520 -38622630 - L2 LINE L2 -84 3188 3031 206 307 247 13 chr5 161007860 161008010 -38622140 + L2 LINE L2 2772 2956 -358 1038 264 219 5 chr5 161008057 161008775 -38621375 - L2 LINE L2 -50 3263 2395 623 288 132 28 chr5 161008797 161009085 -38621065 + L2 LINE L2 2990 3307 -6 319 259 40 33 chr5 161009188 161009359 -38620791 - L2 LINE L2 -38 3275 3099 341 303 67 0 chr5 161009649 161009768 -38620382 + MIR SINE MIR 135 261 -1 209 304 0 0 chr5 161009829 161009885 -38620265 + L2 LINE L2 3217 3272 0 422 324 106 15 chr5 161010601 161010941 -38619209 + L1MC4a LINE L1 5542 5912 -1896 2201 221 25 40 chr5 161010945 161011506 -38618644 + MLT1F1 LTR MaLR 1 654 0 801 259 28 78 chr5 161013005 161013260 -38616890 + MIR SINE MIR 17 258 -4 246 314 223 15 chr5 161013310 161013763 -38616387 - L2 LINE L2 -3 3269 2703 367 302 29 35 chr5 161014715 161014885 -38615265 + MIR3 SINE MIR 13 185 -77 23 0 0 0 chr5 161014905 161014928 -38615222 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 161014975 161014998 -38615152 + AT_rich Low_complexity Low_complexity 1 23 0 362 297 31 23 chr5 161015038 161015166 -38614984 + L2 LINE L2 3184 3312 -1 286 258 24 97 chr5 161015974 161016098 -38614052 + L2 LINE L2 2967 3081 -191 21 57 0 0 chr5 161016275 161016310 -38613840 + AT_rich Low_complexity Low_complexity 1 35 0 226 264 42 14 chr5 161016532 161016604 -38613546 + MIR SINE MIR 176 249 -13 651 277 126 0 chr5 161016626 161016832 -38613318 - MIR SINE MIR -3 259 28 6434 31 60 0 chr5 161017298 161018092 -38612058 + L1PA4 LINE L1 5311 6152 -3 212 298 380 0 chr5 161018134 161018292 -38611858 + MIR SINE MIR 28 245 -17 514 210 0 58 chr5 161018775 161018930 -38611220 + MIR SINE MIR 101 245 -17 212 416 0 0 chr5 161019074 161019163 -38610987 + L2 LINE L2 3184 3272 0 373 296 10 61 chr5 161019810 161020006 -38610144 + MIR SINE MIR 75 260 -2 213 380 43 0 chr5 161020116 161020208 -38609942 - L2 LINE L2 -9 3304 3209 1677 175 4 18 chr5 161020210 161020490 -38609660 - AluJo SINE Alu -35 277 2 22 0 0 0 chr5 161020493 161020515 -38609635 + AT_rich Low_complexity Low_complexity 1 22 0 254 258 167 23 chr5 161020688 161020820 -38609330 - L2 LINE L2 -480 2834 2684 189 107 0 0 chr5 161021284 161021312 -38608838 + (CA)n Simple_repeat Simple_repeat 2 29 0 408 276 96 6 chr5 161022992 161023148 -38607002 - MIR SINE MIR -21 241 72 2251 92 27 0 chr5 161023230 161023525 -38606625 + AluSx SINE Alu 5 307 -5 234 174 0 0 chr5 161023978 161024024 -38606126 + (CATA)n Simple_repeat Simple_repeat 2 47 0 2325 135 36 0 chr5 161024028 161024421 -38605729 - L1MC1 LINE L1 -8 6325 5919 1799 159 0 0 chr5 161024527 161024791 -38605359 - AluJb SINE Alu -13 299 36 426 279 144 66 chr5 161024891 161025224 -38604926 + L2 LINE L2 2545 2903 -411 1593 163 26 0 chr5 161025341 161025611 -38604539 - AluSx SINE Alu -15 297 21 1063 148 28 11 chr5 161025681 161025857 -38604293 + MER5A DNA MER1_type 1 179 -10 340 326 123 0 chr5 161026142 161026280 -38603870 - L2 LINE L2 0 3272 3118 426 221 186 56 chr5 161026319 161026500 -38603650 + L1ME4a LINE L1 5588 5744 -377 2183 119 0 22 chr5 161026500 161026811 -38603339 + AluSx SINE Alu 1 304 -8 426 221 186 56 chr5 161026811 161027076 -38603074 + L1ME4a LINE L1 5744 6092 -29 297 243 178 0 chr5 161028037 161028144 -38602006 + MLT1J LTR MaLR 2 127 -384 437 265 44 15 chr5 161028177 161028313 -38601837 + MLT1J2 LTR MaLR 37 176 -274 638 288 52 8 chr5 161028401 161028668 -38601482 + L1MC4a LINE L1 5625 5903 -1905 387 232 61 10 chr5 161028677 161028776 -38601374 - L2 LINE L2 -11 3302 3199 189 0 0 0 chr5 161028836 161028857 -38601293 + (TA)n Simple_repeat Simple_repeat 2 22 0 385 263 75 44 chr5 161030565 161030725 -38599425 + MIR SINE MIR 98 262 0 198 286 31 20 chr5 161030795 161030893 -38599257 + L3 LINE CR1 1317 1415 -162 6868 199 36 28 chr5 161030906 161030959 -38599191 + L1MB4 LINE L1 3305 3356 -2824 2278 125 0 0 chr5 161030959 161031271 -38598879 + AluSx SINE Alu 1 312 0 6868 199 36 28 chr5 161031271 161034071 -38596079 + L1MB4 LINE L1 3356 6179 -1 389 344 28 28 chr5 161034302 161034482 -38595668 + L3 LINE CR1 1397 1576 -1 21 0 0 0 chr5 161036003 161036024 -38594126 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 161036705 161036736 -38593414 + AT_rich Low_complexity Low_complexity 1 31 0 198 225 56 70 chr5 161036812 161036883 -38593267 - L2 LINE L2 -12 3301 3232 361 333 108 17 chr5 161037467 161037556 -38592594 - MIR SINE MIR -9 253 173 405 0 0 0 chr5 161037556 161037601 -38592549 + (TA)n Simple_repeat Simple_repeat 2 46 0 361 333 108 17 chr5 161037601 161037742 -38592408 - MIR SINE MIR -89 173 2 2394 149 49 2 chr5 161038284 161038693 -38591457 + MSTA LTR MaLR 1 428 0 243 209 52 0 chr5 161039218 161039333 -38590817 + GA-rich Low_complexity Low_complexity 1 121 0 322 314 57 0 chr5 161039489 161039613 -38590537 + L1ME4a LINE L1 5718 5848 -273 23 54 0 0 chr5 161041469 161041506 -38588644 + AT_rich Low_complexity Low_complexity 1 37 0 351 256 215 8 chr5 161041552 161041673 -38588477 + HAL1b LINE L1 746 891 -457 2028 149 0 3 chr5 161041685 161041994 -38588156 + AluJo SINE Alu 1 308 -4 2433 123 3 5 chr5 161042209 161042600 -38587550 + L1MA4 LINE L1 5904 6293 -7 382 266 21 0 chr5 161043410 161043504 -38586646 - MIR SINE MIR -115 147 52 534 323 64 26 chr5 161043588 161043901 -38586249 - MER102b DNA MER1_type -3 338 14 271 192 27 0 chr5 161043903 161043976 -38586174 + CT-rich Low_complexity Low_complexity 2 76 0 2151 146 0 0 chr5 161043980 161044288 -38585862 - AluSx SINE Alu -4 308 1 1848 144 17 10 chr5 161044873 161045172 -38584978 + AluSx SINE Alu 1 301 -11 285 171 271 0 chr5 161045331 161045401 -38584749 + L2 LINE L2 3184 3272 0 566 306 131 13 chr5 161045964 161046346 -38583804 - L2 LINE L2 -1 3312 2886 215 152 22 0 chr5 161047813 161047859 -38582291 + (TG)n Simple_repeat Simple_repeat 2 48 0 395 281 16 8 chr5 161047867 161047988 -38582162 + MLT1K LTR MaLR 160 281 -307 248 340 21 0 chr5 161048005 161048099 -38582051 + L2 LINE L2 2867 2962 -310 312 343 107 28 chr5 161048220 161048436 -38581714 + MLT1K LTR MaLR 19 251 -337 2650 277 98 13 chr5 161048798 161049899 -38580251 - L2 LINE L2 0 3313 2136 504 227 26 129 chr5 161049911 161050105 -38580045 - MIR SINE MIR -69 193 20 227 321 99 38 chr5 161050331 161050462 -38579688 + MER5A DNA MER1_type 45 183 -6 341 243 0 14 chr5 161051521 161051595 -38578555 + MIR SINE MIR 120 192 -70 2823 141 100 34 chr5 161051596 161052236 -38577914 + L1MA9 LINE L1 5630 6311 -1 235 272 76 43 chr5 161052883 161052975 -38577175 - L2 LINE L2 -5 3267 3173 281 279 0 51 chr5 161052998 161053077 -38577073 + L2 LINE L2 3239 3313 0 592 316 77 8 chr5 161055078 161055312 -38574838 - MIR SINE MIR 0 262 13 26 50 0 0 chr5 161056610 161056650 -38573500 + AT_rich Low_complexity Low_complexity 1 40 0 238 308 0 33 chr5 161056651 161056742 -38573408 - MIR SINE MIR -1 261 174 3268 138 36 40 chr5 161057193 161057333 -38572817 + L1MA9 LINE L1 5649 5788 -524 324 70 0 0 chr5 161057333 161057376 -38572774 + (CA)n Simple_repeat Simple_repeat 2 44 0 3268 138 36 40 chr5 161057376 161057902 -38572248 + L1MA9 LINE L1 5788 6312 0 631 265 114 9 chr5 161058008 161058227 -38571923 + MIR SINE MIR 20 261 -1 544 288 73 17 chr5 161060112 161060289 -38569861 + MIR SINE MIR 12 198 -64 2219 102 0 0 chr5 161060305 161060598 -38569552 + AluY SINE Alu 1 293 -18 857 231 33 37 chr5 161060615 161060858 -38569292 - MIR SINE MIR 0 262 21 180 98 49 98 chr5 161061927 161061968 -38568182 - L2 LINE L2 -576 2738 2700 319 331 101 0 chr5 161063310 161063449 -38566701 + MIR3 SINE MIR 42 194 -14 * 487 281 157 0 chr5 161063448 161063601 -38566549 + MER5A DNA MER1_type 13 189 0 201 349 12 0 chr5 161063601 161063642 -38566508 + MIR3 SINE MIR 161 202 -6 749 216 72 19 chr5 161063940 161064148 -38566002 - MIR SINE MIR -32 230 12 2439 92 0 6 chr5 161064205 161064520 -38565630 - AluSq SINE Alu 0 313 1 845 212 106 5 chr5 161064605 161064794 -38565356 - MER3 DNA MER1_type -1 208 1 333 0 0 0 chr5 161065379 161065416 -38564734 + (TG)n Simple_repeat Simple_repeat 1 37 0 844 292 82 47 chr5 161065860 161066474 -38563676 - L2 LINE L2 -140 3173 2430 482 273 62 33 chr5 161066484 161066584 -38563566 - MIR SINE MIR -27 235 139 2064 154 33 33 chr5 161066584 161066948 -38563202 - THE1B LTR MaLR 0 364 1 482 273 62 33 chr5 161066948 161067075 -38563075 - MIR SINE MIR -123 139 3 2431 32 0 0 chr5 161067151 161067435 -38562715 - L1PA5 LINE L1 -7 6147 5864 2092 99 14 14 chr5 161067435 161067718 -38562432 - AluSc SINE Alu -26 283 1 256 287 0 153 chr5 161067930 161067978 -38562172 + L2 LINE L2 3141 3195 -77 2377 68 0 23 chr5 161067978 161068287 -38561863 - AluY SINE Alu -9 302 1 256 287 0 153 chr5 161068287 161068388 -38561762 + L2 LINE L2 3195 3267 -5 314 258 66 77 chr5 161068485 161068667 -38561483 + MIR SINE MIR 33 212 -50 182 307 147 33 chr5 161068734 161068884 -38561266 + MIR SINE MIR 23 189 -73 261 252 8 50 chr5 161068884 161069003 -38561147 + FRAM SINE Alu 37 150 -16 491 181 51 0 chr5 161069003 161069141 -38561009 + L1PA5 LINE L1 5864 6008 -146 288 0 0 0 chr5 161069673 161069705 -38560445 + (TA)n Simple_repeat Simple_repeat 1 32 0 419 136 6 56 chr5 161069781 161069943 -38560207 + (TA)n Simple_repeat Simple_repeat 1 154 0 1134 126 6 0 chr5 161069954 161070128 -38560022 - THE1B LTR MaLR -189 175 1 280 246 87 0 chr5 161070128 161070197 -38559953 - MIR SINE MIR -129 133 59 211 197 0 26 chr5 161070198 161070274 -38559876 + (TA)n Simple_repeat Simple_repeat 2 75 0 235 286 36 0 chr5 161070276 161070332 -38559818 + MIR SINE MIR 197 254 -8 3519 116 109 34 chr5 161071456 161072128 -38558022 + MER50 LTR ERV1 1 722 -12 376 307 94 42 chr5 161072164 161072451 -38557699 - L3 LINE CR1 -16 1561 1260 328 333 54 0 chr5 161072472 161072583 -38557567 + L2 LINE L2 3197 3313 0 232 272 68 10 chr5 161072619 161072722 -38557428 - MER102a DNA MER1_type -1 329 221 618 298 145 11 chr5 161072954 161073216 -38556934 - L3 LINE CR1 -191 1386 1090 231 259 91 50 chr5 161073227 161073247 -38556903 + L1ME LINE L1 5705 5723 -398 1627 156 30 7 chr5 161073247 161073516 -38556634 + AluJo SINE Alu 14 288 -24 231 259 91 50 chr5 161073516 161073715 -38556435 + L1ME LINE L1 5723 5933 -188 320 274 40 68 chr5 161073883 161074035 -38556115 - MER5B DNA MER1_type -28 161 4 410 309 119 21 chr5 161074037 161074364 -38555786 - L3 LINE CR1 -562 1015 657 467 203 49 0 chr5 161074537 161074660 -38555490 - L1MA8 LINE L1 -16 6275 6147 593 276 131 81 chr5 161075015 161075421 -38554729 + L2 LINE L2 2847 3272 0 549 250 109 5 chr5 161075675 161075859 -38554291 - MIR SINE MIR -6 256 54 272 385 33 8 chr5 161075871 161075993 -38554157 + MIR SINE MIR 16 140 -68 964 116 1 3 chr5 161076786 161076966 -38553184 + L1MA6 LINE L1 5552 5730 -435 2815 108 79 2 chr5 161076976 161077459 -38552691 + L1MA6 LINE L1 5781 6300 0 614 297 57 43 chr5 161077734 161078155 -38551995 + L2 LINE L2 2241 2667 -647 222 297 144 8 chr5 161078661 161078779 -38551371 + MIR SINE MIR 18 151 -111 219 315 27 36 chr5 161079012 161079123 -38551027 - MIR SINE MIR -105 157 48 591 335 94 21 chr5 161079350 161079926 -38550224 + L2 LINE L2 2688 3313 0 2294 102 0 0 chr5 161080304 161080608 -38549542 - AluY SINE Alu -7 304 1 1926 106 74 21 chr5 161081847 161082131 -38548019 - AluSq SINE Alu -14 299 1 373 211 74 42 chr5 161082719 161082814 -38547336 + MIR SINE MIR 48 145 -117 192 200 100 0 chr5 161084067 161084107 -38546043 + L2 LINE L2 3256 3299 -14 180 320 77 26 chr5 161084168 161084246 -38545904 + L2 LINE L2 3141 3222 -50 358 275 11 11 chr5 161084683 161084774 -38545376 - L2 LINE L2 -48 3265 3175 288 70 0 0 chr5 161085111 161085154 -38544996 + (CAGAGA)n Simple_repeat Simple_repeat 4 46 0 24 53 0 0 chr5 161085345 161085383 -38544767 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 161086333 161086354 -38543796 + AT_rich Low_complexity Low_complexity 1 21 0 653 325 43 0 chr5 161086964 161087198 -38542952 + MIR SINE MIR 9 252 -10 312 276 81 16 chr5 161087320 161087443 -38542707 + MIR SINE MIR 118 248 -14 210 342 0 0 chr5 161087468 161087544 -38542606 + MIR SINE MIR 150 225 -37 745 107 10 0 chr5 161087639 161087742 -38542408 - AluSx SINE Alu -17 293 190 1001 138 7 0 chr5 161087743 161087881 -38542269 - AluSx SINE Alu -174 139 1 1819 174 31 11 chr5 161087966 161088322 -38541828 + Tigger3b DNA MER2_type 1 363 -868 2263 124 0 0 chr5 161088325 161088632 -38541518 + AluSx SINE Alu 2 308 -4 826 38 0 19 chr5 161088637 161088742 -38541408 + L1PA10 LINE L1 6064 6166 -2 1056 90 6 66 chr5 161088750 161088916 -38541234 + AluSg/x SINE Alu 132 287 -23 4808 111 58 25 chr5 161088918 161089488 -38540662 + Tigger3b DNA MER2_type 356 965 -2064 2372 100 10 6 chr5 161089488 161089799 -38540351 - AluSq SINE Alu -1 312 1 4808 111 58 25 chr5 161089799 161090077 -38540073 + Tigger3b DNA MER2_type 965 1232 0 232 170 21 0 chr5 161090828 161090875 -38539275 + C-rich Low_complexity Low_complexity 2 49 0 683 327 12 24 chr5 161091269 161091523 -38538627 - MIR SINE MIR -10 252 2 2542 155 48 4 chr5 161091748 161092206 -38537944 - L1PA16 LINE L1 -5 6161 5684 269 262 109 49 chr5 161092670 161092853 -38537297 - MIR3 SINE MIR -11 197 4 464 296 136 15 chr5 161093001 161093200 -38536950 + MIR SINE MIR 34 256 -6 201 235 0 59 chr5 161094046 161094097 -38536053 - L2 LINE L2 0 3272 3225 1849 160 19 25 chr5 161094179 161094547 -38535603 + MER47A DNA MER2_type 1 366 0 1403 166 38 10 chr5 161094621 161094935 -38535215 - MER33 DNA MER1_type 0 324 2 272 280 80 40 chr5 161095267 161095392 -38534758 - MIR SINE MIR -56 206 77 2067 142 3 0 chr5 161095411 161095707 -38534443 + AluSx SINE Alu 14 310 -2 445 301 142 23 chr5 161095993 161096212 -38533938 - L3 LINE CR1 -26 1551 1307 2022 133 7 0 chr5 161096348 161096633 -38533517 + AluSx SINE Alu 1 287 -25 222 128 0 26 chr5 161097344 161097383 -38532767 - L2 LINE L2 -12 3260 3223 311 280 107 27 chr5 161097410 161097560 -38532590 + MIR SINE MIR 95 256 -6 250 367 67 0 chr5 161097906 161098026 -38532124 - L2 LINE L2 -6 3307 3180 3137 46 3 8 chr5 161098666 161099057 -38531093 + L1PA7 LINE L1 5766 6154 0 1901 125 23 0 chr5 161099594 161099897 -38530253 - L1PA12 LINE L1 0 6168 5859 22 0 0 0 chr5 161099956 161099978 -38530172 + AT_rich Low_complexity Low_complexity 1 22 0 2159 90 7 3 chr5 161100016 161100305 -38529845 + AluSp SINE Alu 1 290 -23 3005 11 0 0 chr5 161100837 161101188 -38528962 - L1HS LINE L1 -277 5878 5528 2465 7 0 0 chr5 161101187 161101477 -38528673 + L1HS LINE L1 5866 6155 0 * 380 305 127 15 chr5 161102061 161102399 -38527751 + L2 LINE L2 2763 3144 -169 768 78 0 18 chr5 161102411 161102668 -38527482 - AluY SINE Alu -2 309 1 248 367 51 19 chr5 161102676 161102834 -38527316 + L2 LINE L2 3150 3312 -1 1063 169 52 61 chr5 161102987 161103213 -38526937 + MER33 DNA MER1_type 1 219 -2366 2003 136 3 0 chr5 161103213 161103500 -38526650 + AluSx SINE Alu 1 288 -24 1063 169 52 61 chr5 161103500 161103513 -38526637 + MER33 DNA MER1_type 219 231 -2354 2334 89 0 0 chr5 161103513 161103804 -38526346 + AluSg SINE Alu 1 291 -19 1063 169 52 61 chr5 161103804 161103891 -38526259 + MER33 DNA MER1_type 231 316 -8 378 297 145 42 chr5 161104189 161104585 -38525565 + L2 LINE L2 2560 3002 -270 331 268 98 121 chr5 161104810 161105034 -38525116 - MIR SINE MIR -21 241 23 326 224 0 0 chr5 161105046 161105113 -38525037 - MIR SINE MIR -111 151 85 5613 177 68 25 chr5 161105278 161106534 -38523616 - L1MC3 LINE L1 -16 7769 6459 303 206 151 0 chr5 161106535 161106608 -38523542 + L2 LINE L2 3194 3277 -36 446 340 90 53 chr5 161107381 161107990 -38522160 + L2 LINE L2 2635 3269 -3 460 261 111 28 chr5 161108381 161108561 -38521589 - L2 LINE L2 -1 3312 3118 940 261 27 23 chr5 161110521 161110781 -38519369 + MIR SINE MIR 1 261 -1 734 367 47 12 chr5 161110929 161111248 -38518902 + L2 LINE L2 2943 3272 0 1807 113 4 0 chr5 161111410 161111684 -38518466 - L1MA4A LINE L1 -15 6288 6014 263 213 0 16 chr5 161112562 161112623 -38517527 + (CATATA)n Simple_repeat Simple_repeat 2 61 0 605 233 80 45 chr5 161113947 161114123 -38516027 + MER5A DNA MER1_type 8 189 0 196 373 76 31 chr5 161114163 161114388 -38515762 + L3 LINE CR1 1238 1472 -105 2442 71 3 3 chr5 161114804 161115101 -38515049 - AluSp SINE Alu -16 297 1 895 233 70 18 chr5 161115132 161115360 -38514790 - MIR SINE MIR -10 252 13 586 266 18 6 chr5 161115458 161115627 -38514523 - MIR SINE MIR 0 262 92 364 390 24 0 chr5 161116198 161116367 -38513783 + MIR SINE MIR 20 192 -70 589 183 0 32 chr5 161116611 161116737 -38513413 + L1PA15 LINE L1 6038 6159 -6 2445 65 3 3 chr5 161118161 161118470 -38511680 - AluY SINE Alu -2 309 1 1045 98 0 0 chr5 161118470 161118602 -38511548 - AluY SINE Alu -176 135 4 23 54 0 0 chr5 161118731 161118768 -38511382 + AT_rich Low_complexity Low_complexity 1 37 0 282 274 105 32 chr5 161119394 161119518 -38510632 - L2 LINE L2 -8 3264 3132 265 287 79 10 chr5 161119523 161119624 -38510526 + MIR SINE MIR 81 188 -74 510 83 0 0 chr5 161120720 161120792 -38509358 + (TCCA)n Simple_repeat Simple_repeat 2 73 0 31 44 0 0 chr5 161120818 161120863 -38509287 + AT_rich Low_complexity Low_complexity 1 45 0 419 323 97 22 chr5 161121103 161121329 -38508821 + L1MC/D LINE L1 5552 5794 -2014 234 0 0 0 chr5 161121503 161121529 -38508621 + (A)n Simple_repeat Simple_repeat 1 26 0 180 237 151 43 chr5 161121721 161121814 -38508336 - MIR SINE MIR -64 144 42 264 292 62 53 chr5 161122039 161122282 -38507868 + L1ME4a LINE L1 5551 5795 -326 216 0 0 0 chr5 161122400 161122424 -38507726 + (CA)n Simple_repeat Simple_repeat 2 25 0 294 208 72 56 chr5 161122426 161122551 -38507599 + L1ME4a LINE L1 5971 6097 -24 301 361 8 16 chr5 161122629 161122751 -38507399 + L2 LINE L2 3188 3308 -5 684 245 217 0 chr5 161123091 161123275 -38506875 + MER58A DNA MER1_type 1 224 0 300 322 91 16 chr5 161123419 161123540 -38506610 + MIR SINE MIR 18 147 -115 269 325 38 0 chr5 161123548 161123628 -38506522 - L2 LINE L2 -2 3270 3188 217 227 17 25 chr5 161123693 161123812 -38506338 + (CATA)n Simple_repeat Simple_repeat 3 120 0 303 236 63 71 chr5 161124624 161124751 -38505399 - MIR3 SINE MIR -47 161 36 328 255 124 81 chr5 161125573 161125734 -38504416 - MIR3 SINE MIR -11 197 30 391 317 87 22 chr5 161125934 161126164 -38503986 + MIR SINE MIR 18 262 0 225 330 37 9 chr5 161126220 161126329 -38503821 - MIR SINE MIR -94 168 57 551 269 57 0 chr5 161126415 161126627 -38503523 + L1MC4a LINE L1 5671 5894 -1914 1306 188 60 80 chr5 161127314 161127712 -38502438 + MLT1B LTR MaLR 1 390 0 413 275 36 100 chr5 161128825 161129076 -38501074 + MIR SINE MIR 8 242 -20 413 320 41 55 chr5 161129779 161129998 -38500152 - L3 LINE CR1 -50 1527 1312 998 291 137 35 chr5 161130018 161130623 -38499527 + L2 LINE L2 2185 2851 -463 1095 118 7 0 chr5 161130715 161130868 -38499282 - AluSc SINE Alu -21 288 135 667 302 107 27 chr5 161130978 161131352 -38498798 + L2 LINE L2 2830 3233 -80 309 327 60 7 chr5 161131558 161131708 -38498442 - MIR SINE MIR 0 262 105 473 284 92 39 chr5 161132140 161132369 -38497781 + MIR SINE MIR 12 252 -10 214 162 0 0 chr5 161132476 161132513 -38497637 + GA-rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 161134058 161134079 -38496071 + AT_rich Low_complexity Low_complexity 1 21 0 195 69 0 0 chr5 161135816 161135845 -38494305 + (CTG)n Simple_repeat Simple_repeat 3 31 0 414 0 0 0 chr5 161137265 161137311 -38492839 + (TG)n Simple_repeat Simple_repeat 1 46 0 241 302 0 23 chr5 161138204 161138290 -38491860 + L2 LINE L2 2875 2958 -314 201 24 71 24 chr5 161138473 161138515 -38491635 + T-rich Low_complexity Low_complexity 2 45 0 1804 143 14 4 chr5 161138517 161138797 -38491353 - AluSx SINE Alu -29 283 1 2210 93 38 0 chr5 161139084 161139375 -38490775 + AluY SINE Alu 1 302 -9 228 324 59 0 chr5 161139376 161139444 -38490706 - L2 LINE L2 -50 3263 3192 489 284 27 38 chr5 161139502 161139685 -38490465 + MIR SINE MIR 26 206 -56 208 290 56 65 chr5 161139741 161139848 -38490302 - L2 LINE L2 -9 3304 3199 567 289 67 10 chr5 161140201 161140409 -38489741 + MIR SINE MIR 29 248 -14 639 212 27 95 chr5 161141010 161141232 -38488918 - MER63A DNA MER1_type 0 210 4 404 303 69 9 chr5 161141954 161142172 -38487978 + L1ME LINE L1 5575 5805 -316 638 242 181 5 chr5 161142189 161142404 -38487746 - MIR SINE MIR 0 262 10 3545 153 14 33 chr5 161142558 161143142 -38487008 + L1MB7 LINE L1 5496 6066 -118 2294 77 0 10 chr5 161143142 161143481 -38486669 + AluY SINE Alu 1 311 0 3545 153 14 33 chr5 161143481 161143591 -38486559 + L1MB7 LINE L1 6066 6177 -7 25 83 0 0 chr5 161143880 161143940 -38486210 + AT_rich Low_complexity Low_complexity 1 60 0 845 162 89 70 chr5 161144073 161144387 -38485763 - MER33 DNA MER1_type 0 324 5 890 277 207 28 chr5 161145068 161146203 -38483947 + L2 LINE L2 1968 3312 -1 987 260 70 72 chr5 161146432 161146880 -38483270 + MER77 LTR ERV1 178 599 -6 429 268 73 12 chr5 161146941 161147105 -38483045 - MIR3 SINE MIR -1 207 34 558 297 206 5 chr5 161148253 161148462 -38481688 + MIR SINE MIR 9 259 -3 220 182 0 106 chr5 161148663 161148729 -38481421 - L2 LINE L2 -4 3309 3251 648 242 38 0 chr5 161148902 161149059 -38481091 - MER45A DNA AcHobo 0 178 16 225 391 9 9 chr5 161149145 161149255 -38480895 + L2 LINE L2 2924 3033 -239 366 254 70 0 chr5 161149825 161149939 -38480211 - MER103 DNA DNA -33 133 12 195 317 135 73 chr5 161150027 161150276 -38479874 + L2 LINE L2 2800 3061 -211 1914 127 29 0 chr5 161150624 161150748 -38479402 + AluSx SINE Alu 1 120 -187 1649 77 4 8 chr5 161150748 161150982 -38479168 + L1PA8 LINE L1 5940 6172 0 1914 127 29 0 chr5 161150982 161151156 -38478994 + AluSx SINE Alu 120 307 0 287 357 81 54 chr5 161151156 161151522 -38478628 + L2 LINE L2 2545 2925 -347 2019 158 0 0 chr5 161151522 161151825 -38478325 - AluJb SINE Alu -9 303 1 287 357 81 54 chr5 161151825 161151899 -38478251 + L2 LINE L2 2925 2996 -276 231 376 112 0 chr5 161151959 161152084 -38478066 + L2 LINE L2 3134 3272 0 282 321 131 46 chr5 161152165 161152576 -38477574 + L2 LINE L2 2836 3281 -32 309 294 141 21 chr5 161153300 161153502 -38476648 - MIR SINE MIR -3 259 37 678 333 42 51 chr5 161154520 161154991 -38475159 + HAL1 LINE L1 684 1150 -1357 2208 106 17 0 chr5 161154993 161155294 -38474856 + AluSq SINE Alu 1 306 -7 1046 39 0 0 chr5 161155296 161155426 -38474724 - L1PA3 LINE L1 -1286 4860 4731 7705 22 1 0 chr5 161155426 161156723 -38473427 + L1PA3 LINE L1 4858 6155 0 661 259 107 37 chr5 161156723 161157152 -38472998 + HAL1 LINE L1 1142 1600 -907 669 131 23 8 chr5 161157565 161157695 -38472455 + CT-rich Low_complexity Low_complexity 3 134 0 2901 88 31 31 chr5 161157706 161158159 -38471991 - L1PA10 LINE L1 -6 6162 5710 1753 148 21 24 chr5 161158308 161158599 -38471551 + AluJo SINE Alu 10 299 -13 443 356 122 12 chr5 161158701 161159155 -38470995 - L2 LINE L2 -66 3206 2703 349 241 25 0 chr5 161159554 161159633 -38470517 - MIR SINE MIR -21 241 161 206 341 128 34 chr5 161159674 161159853 -38470297 + L2 LINE L2 2625 2820 -494 1768 197 124 17 chr5 161159953 161160420 -38469730 + Charlie1b DNA MER1_type 7 523 0 219 69 0 0 chr5 161160423 161160452 -38469698 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1887 189 0 6 chr5 161160467 161160779 -38469371 - AluJb SINE Alu -2 310 1 433 283 162 30 chr5 161160795 161160993 -38469157 + MIR SINE MIR 12 235 -27 1477 203 66 11 chr5 161161951 161162387 -38467763 + L1ME LINE L1 5203 5670 -496 280 235 29 0 chr5 161162394 161162462 -38467688 + L1ME1 LINE L1 5628 5697 -469 627 166 0 106 chr5 161162485 161162636 -38467514 - AluJo SINE Alu -177 135 1 1179 229 57 0 chr5 161162637 161162952 -38467198 + L1ME1 LINE L1 5690 6022 -144 322 169 56 14 chr5 161162956 161162981 -38467169 + MER3 DNA MER1_type 19 46 -163 326 151 0 81 chr5 161162981 161163067 -38467083 - MER3 DNA MER1_type 0 209 131 1315 196 7 81 chr5 161163077 161163388 -38466762 + MER3 DNA MER1_type 2247 2579 -45 2364 64 3 0 chr5 161163388 161163703 -38466447 - AluSp SINE Alu 0 316 1 388 104 0 78 chr5 161163709 161163786 -38466364 - L1MA5 LINE L1 0 6300 6230 1315 196 7 81 chr5 161163786 161163873 -38466277 + MER3 DNA MER1_type 2584 2624 0 327 223 12 0 chr5 161163873 161163959 -38466191 + L1ME1 LINE L1 6045 6130 -34 620 255 93 0 chr5 161165179 161165340 -38464810 + MER119 DNA MER1_type 1 176 -407 1042 193 55 22 chr5 161165411 161165685 -38464465 + MER119 DNA MER1_type 292 574 -9 317 306 41 8 chr5 161165693 161165814 -38464336 - MIR SINE MIR -90 172 48 308 159 0 16 chr5 161165838 161165901 -38464249 + CT-rich Low_complexity Low_complexity 1 62 0 828 139 8 0 chr5 161165905 161166034 -38464116 - AluJb SINE Alu -34 278 149 490 295 12 29 chr5 161167434 161167607 -38462543 + MER96 DNA MER1_type? 1 170 -5 640 224 7 7 chr5 161167612 161167755 -38462395 + MIR SINE MIR 110 252 -10 380 334 98 60 chr5 161167873 161168166 -38461984 + L2 LINE L2 2766 3083 -189 2103 145 0 0 chr5 161168166 161168463 -38461687 - AluSg SINE Alu -13 297 1 380 334 98 60 chr5 161168463 161168659 -38461491 + L2 LINE L2 3083 3270 -2 223 280 56 47 chr5 161168691 161168798 -38461352 - L3 LINE CR1 -128 1449 1342 306 303 42 124 chr5 161168853 161169037 -38461113 - L2 LINE L2 -1 3271 3128 2221 105 3 7 chr5 161169037 161169343 -38460807 + AluSx SINE Alu 1 305 -7 306 303 42 124 chr5 161169343 161169514 -38460636 - L2 LINE L2 -144 3128 2945 2315 82 30 13 chr5 161169583 161169888 -38460262 - AluSg SINE Alu 0 310 1 795 308 32 51 chr5 161172089 161172501 -38457649 + L2 LINE L2 2464 2867 -447 273 57 0 0 chr5 161172531 161172566 -38457584 + (CA)n Simple_repeat Simple_repeat 2 36 0 275 383 0 0 chr5 161173528 161173622 -38456528 + L2 LINE L2 3179 3272 0 402 277 82 22 chr5 161173953 161174137 -38456013 + MIR SINE MIR 64 258 -4 227 250 25 50 chr5 161174329 161174409 -38455741 + L2 LINE L2 3223 3300 -13 292 265 65 22 chr5 161174592 161174697 -38455453 - MIR SINE MIR -65 143 35 305 282 42 63 chr5 161175598 161175740 -38454410 + L2 LINE L2 2727 2865 -449 335 319 26 0 chr5 161175998 161176111 -38454039 + L2 LINE L2 3183 3298 -15 472 324 50 0 chr5 161176146 161176285 -38453865 - MIR SINE MIR -116 146 1 421 263 67 41 chr5 161177021 161177215 -38452935 + MIR SINE MIR 64 262 0 236 241 19 0 chr5 161177427 161177481 -38452669 + L2 LINE L2 3208 3262 -10 368 214 218 97 chr5 161178972 161179178 -38450972 - MIR SINE MIR -31 231 1 216 279 16 0 chr5 161179208 161179269 -38450881 + L2 LINE L2 3211 3272 0 447 259 116 14 chr5 161179724 161179940 -38450210 + MLT1L LTR MaLR 30 267 -348 258 230 51 96 chr5 161180090 161180268 -38449882 + MLT1K LTR MaLR 407 576 -12 4444 82 8 11 chr5 161180702 161181326 -38448824 + L1PA13 LINE L1 5539 6160 -3 741 250 11 6 chr5 161181661 161181837 -38448313 + MER45A DNA AcHobo 2 178 0 1269 26 0 0 chr5 161181892 161182048 -38448102 - L1PA7 LINE L1 -266 5888 5733 * 1872 249 84 31 chr5 161182043 161183405 -38446745 - L1M4c LINE L1 -4338 2487 915 227 79 26 0 chr5 161183459 161183497 -38446653 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 903 110 24 0 chr5 161183499 161183626 -38446524 - AluY SINE Alu -30 281 152 281 238 0 36 chr5 161183668 161183752 -38446398 - L1M4c LINE L1 -5662 880 800 293 221 58 39 chr5 161184237 161184341 -38445809 - L1M4c LINE L1 -6391 151 46 393 248 112 0 chr5 161184690 161184815 -38445335 - MER117 DNA MER1_type -53 144 6 2230 91 3 29 chr5 161184817 161185126 -38445024 - AluSg SINE Alu -9 301 1 2127 264 58 88 chr5 161185238 161186474 -38443676 + L2 LINE L2 2124 3313 0 300 280 9 0 chr5 161186634 161186741 -38443409 - MER103 DNA DNA -20 146 39 501 283 204 0 chr5 161186818 161187009 -38443141 + MIR SINE MIR 13 242 -20 716 318 65 36 chr5 161187037 161187449 -38442701 - L2 LINE L2 -25 3288 2865 2160 90 45 61 chr5 161189386 161189763 -38440387 + THE1C LTR MaLR 1 371 -4 6931 26 1 0 chr5 161190768 161191616 -38438534 - L1PA2 LINE L1 0 6155 5307 282 56 0 0 chr5 161191667 161191703 -38438447 + (A)n Simple_repeat Simple_repeat 1 36 0 232 290 112 37 chr5 161192086 161192193 -38437957 - L2 LINE L2 0 3313 3199 1806 203 9 3 chr5 161192198 161192547 -38437603 + MLT1A1 LTR MaLR 15 365 0 466 291 153 5 chr5 161192935 161193124 -38437026 + MIR SINE MIR 34 250 -12 222 330 156 9 chr5 161193830 161193939 -38436211 - L2 LINE L2 -12 3260 3136 396 282 45 82 chr5 161193966 161194107 -38436043 - MIR SINE MIR -14 248 116 2226 115 3 0 chr5 161194107 161194403 -38435747 + AluSx SINE Alu 1 297 -15 396 282 45 82 chr5 161194403 161194481 -38435669 - MIR SINE MIR -146 116 37 297 360 16 32 chr5 161194642 161194828 -38435322 - L2 LINE L2 -215 3057 2875 318 260 6 78 chr5 161195194 161195371 -38434779 - MER104 DNA Tc2 0 180 19 24 67 0 0 chr5 161195580 161195625 -38434525 + AT_rich Low_complexity Low_complexity 1 45 0 341 185 27 123 chr5 161195660 161195806 -38434344 + L1ME4a LINE L1 5922 6053 -68 1771 92 4 66 chr5 161195839 161196110 -38434040 - AluSx SINE Alu 0 312 59 1791 203 74 31 chr5 161198869 161199317 -38430833 - MLT1C LTR MaLR 0 467 1 295 184 176 1 chr5 161199330 161199457 -38430693 - HAL1b LINE L1 -8 6113 1205 365 293 69 43 chr5 161199523 161199755 -38430395 - L1ME LINE L1 -383 5738 5501 2353 92 0 0 chr5 161199890 161200184 -38429966 - AluY SINE Alu -17 294 1 309 310 97 70 chr5 161204281 161204610 -38425540 + MLT1K LTR MaLR 2 339 -249 944 252 4 35 chr5 161205483 161205737 -38424413 + MIR SINE MIR 17 262 0 272 245 93 79 chr5 161206161 161206300 -38423850 - MER5A DNA MER1_type -6 183 43 242 308 0 13 chr5 161206332 161206410 -38423740 - L2 LINE L2 -209 3063 2987 5793 115 55 18 chr5 161206458 161207541 -38422609 + L1MA3 LINE L1 5182 6305 0 407 315 20 14 chr5 161207724 161207870 -38422280 - MER5B DNA MER1_type -7 171 25 591 157 47 62 chr5 161208452 161208619 -38421531 - L1ME2 LINE L1 0 6334 6012 1967 110 23 10 chr5 161208619 161208919 -38421231 - L1PA10 LINE L1 0 6168 5865 2726 229 49 9 chr5 161258927 161259528 -38370622 + L1ME2 LINE L1 5336 5911 -423 578 135 21 0 chr5 161259528 161259624 -38370526 + L1MB5 LINE L1 6077 6174 0 2247 90 0 10 chr5 161259630 161259929 -38370221 + AluSc SINE Alu 1 296 -13 2726 229 49 9 chr5 161259929 161260123 -38370027 + L1ME2 LINE L1 5915 6332 -2 225 258 11 65 chr5 161260297 161260390 -38369760 + LTR33 LTR ERVL 88 175 -346 696 211 0 8 chr5 161260790 161260918 -38369232 - FRAM SINE Alu -17 159 33 192 40 0 0 chr5 161260926 161260951 -38369199 + (TTA)n Simple_repeat Simple_repeat 3 27 0 6747 72 11 1 chr5 161260951 161262426 -38367724 - L1PA7 LINE L1 -18 6136 4655 1349 312 69 13 chr5 161262428 161263071 -38367079 + L2 LINE L2 2616 3312 -1 360 0 0 0 chr5 161263116 161263156 -38366994 + (CA)n Simple_repeat Simple_repeat 2 41 0 1817 132 15 44 chr5 161263158 161263498 -38366652 - MER44D DNA MER2_type -3 606 7 22 0 0 0 chr5 161263597 161263619 -38366531 + AT_rich Low_complexity Low_complexity 1 22 0 341 268 118 8 chr5 161263633 161263760 -38366390 + L1MC4a LINE L1 5821 5961 -1847 505 189 146 85 chr5 161264692 161264856 -38365294 + L2 LINE L2 3140 3313 0 229 318 54 36 chr5 161264891 161265168 -38364982 - HAL1 LINE L1 -785 1722 1441 1616 160 27 21 chr5 161265173 161265511 -38364639 - L1MD1 LINE L1 -6 6236 5897 653 234 30 4 chr5 161265528 161265728 -38364422 + MER89 LTR ERV1 42 345 -214 3175 211 51 13 chr5 161265732 161266833 -38363317 - L1MDa LINE L1 -3003 3537 2352 2653 46 0 0 chr5 161266833 161267136 -38363014 - AluY SINE Alu -8 303 1 3175 211 51 13 chr5 161267136 161267596 -38362554 - L1MDa LINE L1 -4188 2352 1911 4946 163 26 30 chr5 161267605 161268665 -38361485 - L1MA7 LINE L1 0 6291 5240 2437 103 0 0 chr5 161268665 161268975 -38361175 - AluSg SINE Alu 0 310 1 4946 163 26 30 chr5 161268975 161269227 -38360923 - L1MA7 LINE L1 -1051 5240 4988 1748 171 29 5 chr5 161269226 161269606 -38360544 + L1 LINE L1 3989 4377 -1769 * 1279 284 18 46 chr5 161269611 161270108 -38360042 + L1M2 LINE L1 18 500 -7065 14524 195 34 10 chr5 161270128 161274695 -38355455 + L1M2 LINE L1 2185 6882 -744 349 241 17 9 chr5 161274850 161274966 -38355184 + L1MA6 LINE L1 6180 6296 -4 2582 176 28 9 chr5 161274984 161275553 -38354597 + L1 LINE L1 4358 4937 -1209 540 174 99 0 chr5 161275552 161275673 -38354477 - L1MDa LINE L1 -4620 1920 1788 * 1193 231 62 71 chr5 161275674 161276080 -38354070 - L1MDa LINE L1 -5724 816 415 2124 136 0 0 chr5 161276177 161276472 -38353678 - AluSx SINE Alu -5 307 13 2033 142 3 0 chr5 161276495 161276783 -38353367 - AluSx SINE Alu -23 289 1 256 311 60 38 chr5 161276799 161276960 -38353190 + MIR SINE MIR 16 184 -24 244 229 111 0 chr5 161277505 161277591 -38352559 - MIR SINE MIR -87 121 27 931 249 83 17 chr5 161277602 161277903 -38352247 - LTR16C LTR ERVL -6 485 165 490 382 13 7 chr5 161278015 161278167 -38351983 - L2 LINE L2 -18 3254 3102 285 339 242 10 chr5 161278300 161278589 -38351561 + L2 LINE L2 2917 3272 0 257 254 14 14 chr5 161280203 161280274 -38349876 + MIR SINE MIR 76 146 -116 497 241 27 9 chr5 161280816 161280928 -38349222 + MER5A DNA MER1_type 73 186 -3 224 273 30 50 chr5 161280840 161280939 -38349211 - MER5A DNA MER1_type -85 104 8 * 810 64 0 0 chr5 161282249 161282359 -38347791 + AluY SINE Alu 197 306 -5 362 339 17 8 chr5 161282431 161282549 -38347601 - L2 LINE L2 0 3272 3154 722 276 6 17 chr5 161282713 161282887 -38347263 - MER5B DNA MER1_type -6 172 1 687 275 12 12 chr5 161283210 161283377 -38346773 - MER5A DNA MER1_type -5 184 18 303 328 59 8 chr5 161283690 161283809 -38346341 - MIR SINE MIR -3 259 135 264 83 0 0 chr5 161284409 161284445 -38345705 - L1PB1 LINE L1 -270 5881 5846 1786 88 15 4 chr5 161284445 161284707 -38345443 + L1PB1 LINE L1 5886 6150 -1 324 70 0 0 chr5 161284788 161284831 -38345319 + (TG)n Simple_repeat Simple_repeat 2 44 0 367 323 127 9 chr5 161284976 161285205 -38344945 - MIR SINE MIR 0 262 7 208 173 25 123 chr5 161285224 161285305 -38344845 + MER5A DNA MER1_type 117 189 0 464 194 254 8 chr5 161285311 161285445 -38344705 - MER5A DNA MER1_type -14 175 9 2281 119 0 0 chr5 161285816 161286118 -38344032 - AluSg SINE Alu -8 302 1 1898 175 19 25 chr5 161286707 161287073 -38343077 - MLT1A1 LTR MaLR 0 365 2 270 346 29 27 chr5 161287216 161287364 -38342786 - MER5B DNA MER1_type -2 187 35 567 335 28 0 chr5 161287677 161287856 -38342294 + MER91B DNA MER1_type 6 189 -1 568 327 40 24 chr5 161288540 161288791 -38341359 - MIR SINE MIR -6 256 2 776 226 16 42 chr5 161288828 161289018 -38341132 - MIR SINE MIR -26 236 52 255 233 222 22 chr5 161289332 161289422 -38340728 - L2 LINE L2 -20 3252 3145 262 248 101 64 chr5 161289477 161289586 -38340564 + L2 LINE L2 3201 3313 0 319 279 173 17 chr5 161289879 161290058 -38340092 - L2 LINE L2 -399 2915 2709 1992 75 12 0 chr5 161290342 161290594 -38339556 - AluSg SINE Alu -22 288 34 522 321 68 18 chr5 161291298 161291646 -38338504 - L1ME LINE L1 -414 5707 5342 2070 100 0 0 chr5 161292416 161292677 -38337473 + AluSg SINE Alu 1 261 -49 23 0 0 0 chr5 161292677 161292700 -38337450 + AT_rich Low_complexity Low_complexity 1 23 0 349 203 14 14 chr5 161292819 161292893 -38337257 - MIR SINE MIR -107 101 28 260 299 56 19 chr5 161292934 161293041 -38337109 - MIR SINE MIR -60 148 38 370 271 85 23 chr5 161293713 161293842 -38336308 - MIR SINE MIR -105 157 21 321 222 82 22 chr5 161294341 161294476 -38335674 - MER103 DNA DNA -8 158 16 2370 98 0 0 chr5 161294557 161294864 -38335286 - AluY SINE Alu -4 307 1 518 298 28 0 chr5 161294910 161295051 -38335099 + MIR3 SINE MIR 51 195 -13 320 257 40 14 chr5 161295136 161295210 -38334940 - MIR SINE MIR -82 126 51 21 0 0 0 chr5 161295285 161295306 -38334844 + AT_rich Low_complexity Low_complexity 1 21 0 287 282 0 13 chr5 161295477 161295555 -38334595 + MIR SINE MIR 80 156 -106 506 325 61 4 chr5 161295827 161296055 -38334095 + MIR SINE MIR 2 242 -20 293 311 100 48 chr5 161296527 161296778 -38333372 + L2 LINE L2 3037 3300 -13 228 320 0 20 chr5 161296839 161296939 -38333211 - MIR SINE MIR -25 237 140 384 312 133 12 chr5 161297021 161297194 -38332956 - MIR SINE MIR -67 195 2 813 241 76 34 chr5 161297380 161297616 -38332534 - MIR SINE MIR -5 257 12 188 309 99 37 chr5 161298381 161298462 -38331688 - L2 LINE L2 -9 3263 3178 2008 223 138 0 chr5 161298498 161299091 -38331059 + MER63C DNA MER1_type 256 930 0 759 314 101 58 chr5 161299094 161300064 -38330086 - L2 LINE L2 -86 3186 2177 755 284 41 4 chr5 161300073 161300316 -38329834 - MIR SINE MIR -3 259 8 1960 138 20 7 chr5 161300358 161300663 -38329487 + AluSx SINE Alu 1 309 -3 315 243 105 26 chr5 161300867 161301019 -38329131 - L1ME4a LINE L1 -1 6120 5957 416 233 62 0 chr5 161301092 161301221 -38328929 + MER104 DNA Tc2 44 180 0 737 272 94 0 chr5 161301483 161301781 -38328369 - L1ME4a LINE L1 -1989 5819 5494 2780 184 39 13 chr5 161301889 161302507 -38327643 - L1MD3 LINE L1 -13 7982 7349 2302 114 0 0 chr5 161302512 161302818 -38327332 + AluSx SINE Alu 1 306 -6 301 184 138 0 chr5 161302825 161302912 -38327238 - L1ME4a LINE L1 -2368 5440 5342 727 316 17 4 chr5 161304334 161304571 -38325579 - MIR SINE MIR -21 241 2 188 340 206 0 chr5 161304616 161304713 -38325437 + L2 LINE L2 3137 3253 -19 2213 94 3 3 chr5 161304774 161305071 -38325079 - AluY SINE Alu -14 297 1 3946 207 58 22 chr5 161305100 161306191 -38323959 - L1MB2 LINE L1 -1 6170 5120 396 0 0 0 chr5 161306191 161306235 -38323915 + (TTA)n Simple_repeat Simple_repeat 2 45 0 1987 131 3 0 chr5 161306237 161306519 -38323631 - AluSx SINE Alu -29 283 1 3946 207 58 22 chr5 161306519 161306897 -38323253 - L1MB2 LINE L1 -1051 5120 4653 438 258 0 131 chr5 161307030 161307228 -38322922 + L2 LINE L2 2363 2534 -780 4728 71 87 0 chr5 161307539 161308172 -38321978 + LTR12 LTR ERV1 1 688 0 21374 97 17 6 chr5 161308172 161311279 -38318871 + HERV9 LTR ERV1 1 3139 -5260 5999 92 12 8 chr5 161311286 161312148 -38318002 + HERV9 LTR ERV1 4080 4944 -3455 2136 175 119 67 chr5 161312149 161313005 -38317145 + Harlequin LTR ERV1 840 1740 -5156 * 4821 92 7 76 chr5 161313003 161313834 -38316316 + Harlequin LTR ERV1 7626 8399 0 4887 68 46 24 chr5 161313834 161314507 -38315643 + LTR12 LTR ERV1 1 688 0 28 61 0 0 chr5 161314900 161314949 -38315201 + AT_rich Low_complexity Low_complexity 1 49 0 254 349 110 41 chr5 161314998 161315216 -38314934 + L2 LINE L2 2828 3060 -212 402 21 0 0 chr5 161316397 161316444 -38313706 + (CA)n Simple_repeat Simple_repeat 2 48 0 865 275 157 31 chr5 161316742 161316780 -38313370 + L2 LINE L2 2433 2465 -848 3410 122 6 35 chr5 161316780 161317319 -38312831 - MER1A DNA MER1_type -1 526 4 865 275 157 31 chr5 161317319 161317932 -38312218 + L2 LINE L2 2465 3156 -157 414 114 23 23 chr5 161317986 161318074 -38312076 + Tigger4(Zombi) DNA MER2_type 2511 2598 -133 11221 30 0 1 chr5 161318074 161319491 -38310659 - L1PA2 LINE L1 -1946 4200 2785 10094 22 2 1 chr5 161319491 161321442 -38308708 + L1PA2 LINE L1 4203 6154 -1 793 106 35 7 chr5 161321451 161321592 -38308558 + Tigger4(Zombi) DNA MER2_type 2587 2731 0 628 219 36 7 chr5 161321606 161321743 -38308407 + L2 LINE L2 3171 3311 -2 252 401 36 30 chr5 161321963 161322130 -38308020 + L2 LINE L2 2934 3101 -171 211 275 43 0 chr5 161322209 161322278 -38307872 + MIR SINE MIR 83 154 -108 234 62 0 0 chr5 161322293 161322325 -38307825 + (TATAA)n Simple_repeat Simple_repeat 3 34 0 1264 201 42 23 chr5 161322630 161322889 -38307261 + AluJo SINE Alu 30 293 -19 244 395 36 36 chr5 161323176 161323343 -38306807 - L2 LINE L2 -181 3091 2925 558 349 141 33 chr5 161323416 161324291 -38305859 - L2 LINE L2 -448 2866 1898 375 121 0 0 chr5 161324566 161324624 -38305526 + (CA)n Simple_repeat Simple_repeat 2 59 0 663 292 97 9 chr5 161324712 161324928 -38305222 + L3 LINE CR1 1252 1486 -91 25 0 0 0 chr5 161325000 161325025 -38305125 + AT_rich Low_complexity Low_complexity 1 25 0 191 221 47 93 chr5 161325323 161325409 -38304741 - L2 LINE L2 -12 3260 3179 188 81 81 0 chr5 161326111 161326148 -38304002 + T-rich Low_complexity Low_complexity 2 41 0 718 338 19 6 chr5 161326453 161326773 -38303377 + LTR16B LTR ERVL 140 463 -1 26 30 0 0 chr5 161326835 161326868 -38303282 + AT_rich Low_complexity Low_complexity 1 33 0 3331 272 95 29 chr5 161327583 161328807 -38301343 + L1ME1 LINE L1 36 1178 -5037 1807 147 10 20 chr5 161328807 161329100 -38301050 + AluSc SINE Alu 1 290 -19 3331 272 95 29 chr5 161329100 161330177 -38299973 + L1ME1 LINE L1 1178 2183 -4032 2750 191 31 20 chr5 161330177 161330685 -38299465 + MLT2B3 LTR ERVL 3 519 -35 450 0 0 0 chr5 161330685 161330735 -38299415 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 2750 191 31 20 chr5 161330735 161330772 -38299378 + MLT2B3 LTR ERVL 519 554 0 3331 272 95 29 chr5 161330772 161332003 -38298147 + L1ME1 LINE L1 2183 3764 -2451 2823 195 43 62 chr5 161332012 161333149 -38297001 + L1ME1 LINE L1 5119 6230 -5 300 286 7 64 chr5 161333418 161333558 -38296592 + L2 LINE L2 2943 3074 -198 22 35 0 0 chr5 161333596 161333625 -38296525 + AT_rich Low_complexity Low_complexity 1 29 0 512 184 0 9 chr5 161333641 161333750 -38296400 + CT-rich Low_complexity Low_complexity 2 109 0 297 0 0 0 chr5 161333750 161333783 -38296367 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 426 310 91 0 chr5 161334145 161334332 -38295818 + MIR SINE MIR 46 249 -13 1700 157 100 16 chr5 161334394 161334713 -38295437 - MER7A DNA MER2_type -2 344 1 207 0 0 0 chr5 161334765 161334788 -38295362 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 217 309 31 62 chr5 161335159 161335256 -38294894 - L2 LINE L2 -49 3264 3171 800 262 98 18 chr5 161335375 161335661 -38294489 + L2 LINE L2 3005 3313 0 210 143 0 0 chr5 161335784 161335819 -38294331 + (CAATT)n Simple_repeat Simple_repeat 3 37 0 256 207 12 98 chr5 161335961 161336043 -38294107 - MIR SINE MIR -46 216 142 1621 188 6 19 chr5 161336080 161336394 -38293756 - AluJb SINE Alu -2 310 1 394 270 40 0 chr5 161336394 161336494 -38293656 + L2 LINE L2 3209 3312 -1 252 372 41 16 chr5 161336507 161336628 -38293522 - L2 LINE L2 -160 3112 2989 232 259 59 24 chr5 161337778 161337863 -38292287 - MER5B DNA MER1_type -68 110 23 293 284 62 0 chr5 161338573 161338654 -38291496 - L2 LINE L2 0 3272 3187 699 255 40 51 chr5 161338757 161339013 -38291137 - MIR SINE MIR 0 262 6 408 357 33 40 chr5 161339061 161339304 -38290846 - MIR SINE MIR -17 245 1 21 0 0 0 chr5 161339725 161339746 -38290404 + AT_rich Low_complexity Low_complexity 1 21 0 243 133 0 0 chr5 161340025 161340070 -38290080 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 23 33 0 0 chr5 161340959 161340989 -38289161 + AT_rich Low_complexity Low_complexity 1 30 0 243 0 0 0 chr5 161343165 161343192 -38286958 + (TG)n Simple_repeat Simple_repeat 2 28 0 213 232 0 14 chr5 161343453 161343522 -38286628 + T-rich Low_complexity Low_complexity 2 69 0 402 307 30 22 chr5 161343527 161343665 -38286485 + MIR SINE MIR 41 183 -61 218 307 27 0 chr5 161343704 161343779 -38286371 - MIR SINE MIR 0 262 186 426 299 155 46 chr5 161343890 161344426 -38285724 + L2 LINE L2 2671 3270 -2 1383 92 0 0 chr5 161344808 161344982 -38285168 + AluSg/x SINE Alu 134 307 -3 631 299 83 14 chr5 161345350 161345567 -38284583 - MIR SINE MIR -29 233 2 298 321 36 55 chr5 161345595 161345760 -38284390 + L2 LINE L2 3109 3270 -2 23 0 0 0 chr5 161345943 161345966 -38284184 + AT_rich Low_complexity Low_complexity 1 23 0 205 244 0 0 chr5 161346018 161346063 -38284087 + (TG)n Simple_repeat Simple_repeat 1 45 0 695 237 64 0 chr5 161346063 161346219 -38283931 - MIR SINE MIR -74 188 23 219 245 57 0 chr5 161346463 161346516 -38283634 + MIR SINE MIR 132 187 -75 2327 289 109 13 chr5 161346582 161347553 -38282597 + L2 LINE L2 1505 2568 -746 705 242 6 133 chr5 161347557 161347611 -38282539 + L2 LINE L2 3021 3080 -233 216 0 0 0 chr5 161347611 161347635 -38282515 + (CA)n Simple_repeat Simple_repeat 1 24 0 705 242 6 133 chr5 161347635 161347910 -38282240 + L2 LINE L2 3080 3308 -5 207 314 136 17 chr5 161347965 161348083 -38282067 + MIR SINE MIR 26 157 -105 755 291 52 36 chr5 161348238 161348489 -38281661 - MIR SINE MIR -6 256 2 186 405 71 24 chr5 161348489 161348609 -38281541 - L2 LINE L2 -31 3241 3116 412 286 112 37 chr5 161348609 161348770 -38281380 + MER5B DNA MER1_type 1 173 -5 335 366 12 0 chr5 161349051 161349215 -38280935 + MIR SINE MIR 97 262 0 1708 123 25 7 chr5 161349292 161349577 -38280573 - L1MA5A LINE L1 -3 6294 6005 183 80 0 0 chr5 161350523 161350548 -38279602 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 571 372 51 35 chr5 161350559 161351167 -38278983 - L2 LINE L2 -12 3260 2642 1984 171 12 0 chr5 161351169 161351513 -38278637 - MER7A DNA MER2_type 0 346 1 325 340 173 5 chr5 161352304 161352501 -38277649 - L3 LINE CR1 0 1577 1348 813 259 36 14 chr5 161352635 161352855 -38277295 - MIR SINE MIR -16 246 22 464 242 65 20 chr5 161352929 161353082 -38277068 + MIR SINE MIR 89 248 -14 1678 179 76 19 chr5 161353138 161353507 -38276643 - MLT1B LTR MaLR 0 390 1 1211 247 160 2 chr5 161353735 161354148 -38276002 + L2 LINE L2 2836 3313 0 4681 29 5 2 chr5 161354351 161354907 -38275243 - LTR6B LTR ERV1 0 558 1 206 338 14 0 chr5 161355034 161355105 -38275045 - MER5A DNA MER1_type -73 116 45 213 298 93 37 chr5 161355491 161355652 -38274498 - MIR3 SINE MIR -3 205 36 23 33 0 0 chr5 161356476 161356506 -38273644 + AT_rich Low_complexity Low_complexity 1 30 0 287 254 0 0 chr5 161356710 161356777 -38273373 + MIR SINE MIR 186 252 -10 460 269 42 8 chr5 161356843 161356962 -38273188 - L2 LINE L2 -9 3304 3182 619 297 103 35 chr5 161357317 161357714 -38272436 - L2 LINE L2 0 3313 2890 597 273 88 9 chr5 161357894 161358110 -38272040 + MIR SINE MIR 29 261 -1 500 295 106 5 chr5 161358385 161358592 -38271558 + L2 LINE L2 3082 3309 -4 369 266 124 9 chr5 161358774 161358887 -38271263 - L2 LINE L2 0 3272 3147 291 212 0 0 chr5 161359229 161359314 -38270836 + (TA)n Simple_repeat Simple_repeat 1 85 0 564 225 147 28 chr5 161359612 161359830 -38270320 + MIR SINE MIR 13 256 -6 5454 82 5 4 chr5 161359986 161360728 -38269422 + L1PA11 LINE L1 5424 6166 -8 1688 114 201 38 chr5 161361278 161361646 -38268504 + MSTA LTR MaLR 1 428 0 249 373 0 0 chr5 161361894 161362020 -38268130 + MIR SINE MIR 72 197 -65 1146 330 61 23 chr5 161362326 161363001 -38267149 - L2 LINE L2 -112 3201 2493 369 326 7 22 chr5 161363225 161363360 -38266790 - L2 LINE L2 -5 3308 3176 254 314 23 0 chr5 161363443 161363529 -38266621 - L2 LINE L2 -1093 2221 2134 22 0 0 0 chr5 161363618 161363640 -38266510 + AT_rich Low_complexity Low_complexity 1 22 0 4047 108 3 17 chr5 161363682 161364332 -38265818 + L1PB1 LINE L1 5474 6114 -37 2563 160 2 1 chr5 161364357 161365036 -38265114 - L1P5 LINE L1 -683 5468 4789 317 278 8 16 chr5 161365088 161365214 -38264936 + L1ME3A LINE L1 1233 1357 -5039 21 0 0 0 chr5 161365458 161365479 -38264671 + AT_rich Low_complexity Low_complexity 1 21 0 1591 270 81 17 chr5 161365547 161366015 -38264135 + L1ME3A LINE L1 4300 4736 -1503 1582 206 56 24 chr5 161366015 161366393 -38263757 - MLT1B LTR MaLR 0 390 1 1591 270 81 17 chr5 161366393 161367586 -38262564 + L1ME3A LINE L1 4736 6150 -89 833 182 17 89 chr5 161368468 161368704 -38261446 - MER20 DNA MER1_type 0 219 1 443 318 31 97 chr5 161369196 161369998 -38260152 - L2 LINE L2 0 3272 2443 359 274 126 51 chr5 161370065 161370280 -38259870 - MIR SINE MIR -14 248 18 201 343 119 45 chr5 161370332 161370533 -38259617 + MIR SINE MIR 43 258 -4 * 831 213 96 38 chr5 161370495 161370734 -38259416 - MIR SINE MIR 0 262 10 2341 150 66 4 chr5 161371266 161371733 -38258417 - L1MA8 LINE L1 0 6291 5796 25 0 0 0 chr5 161372295 161372320 -38257830 + AT_rich Low_complexity Low_complexity 1 25 0 668 287 57 45 chr5 161372378 161372622 -38257528 - MIR SINE MIR -1 261 15 832 278 87 51 chr5 161373604 161374001 -38256149 + L2 LINE L2 2701 3128 -185 2412 102 0 0 chr5 161374001 161374304 -38255846 - AluSg SINE Alu -7 303 1 832 278 87 51 chr5 161374304 161374497 -38255653 + L2 LINE L2 3128 3312 -1 307 203 0 0 chr5 161375069 161375128 -38255022 + MLT1L LTR MaLR 152 210 -405 605 146 0 0 chr5 161375128 161375217 -38254933 + AluSc SINE Alu 204 292 -17 278 263 131 46 chr5 161375218 161375393 -38254757 + MLT1L LTR MaLR 197 386 -229 208 296 37 0 chr5 161375517 161375571 -38254579 + L2 LINE L2 2607 2662 -652 1080 277 163 12 chr5 161375604 161376095 -38254055 + L2 LINE L2 2744 3304 -9 229 191 0 0 chr5 161376640 161376682 -38253468 - L2 LINE L2 -5 3308 3267 342 289 54 36 chr5 161376722 161376921 -38253229 + MIR SINE MIR 63 262 0 507 309 41 69 chr5 161377082 161377373 -38252777 + L2 LINE L2 2985 3267 -5 562 306 16 72 chr5 161377928 161377974 -38252176 + MER5A DNA MER1_type 7 54 -135 2185 108 10 0 chr5 161377974 161378269 -38251881 + AluSg SINE Alu 1 298 -12 562 306 16 72 chr5 161378269 161378415 -38251735 + MER5A DNA MER1_type 54 188 -1 22 0 0 0 chr5 161378798 161378820 -38251330 + AT_rich Low_complexity Low_complexity 1 22 0 653 341 65 35 chr5 161379634 161380065 -38250085 + L2 LINE L2 2182 2625 -689 319 321 118 21 chr5 161380107 161380344 -38249806 - MIR SINE MIR -1 261 2 181 241 204 0 chr5 161380561 161380615 -38249535 + L2 LINE L2 3208 3272 0 307 232 90 19 chr5 161380622 161380777 -38249373 + L1ME4a LINE L1 5953 6118 -3 291 328 57 33 chr5 161380990 161381112 -38249038 + L2 LINE L2 3137 3261 -11 375 101 113 0 chr5 161381264 161381423 -38248727 + (TA)n Simple_repeat Simple_repeat 2 178 0 228 171 14 29 chr5 161381413 161381483 -38248667 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 * 366 42 0 0 chr5 161381491 161381539 -38248611 + (CA)n Simple_repeat Simple_repeat 2 49 0 391 220 70 10 chr5 161381562 161381662 -38248488 - MIR SINE MIR -99 163 58 216 286 14 29 chr5 161382123 161382193 -38247957 + MER5A DNA MER1_type 43 111 -78 433 233 32 95 chr5 161382202 161382391 -38247759 + MIR SINE MIR 11 187 -75 192 365 0 0 chr5 161382424 161382498 -38247652 - MIR SINE MIR -2 260 187 236 277 45 90 chr5 161382654 161382721 -38247429 + MER5A DNA MER1_type 16 84 -105 2347 59 0 65 chr5 161382721 161383043 -38247107 + AluY SINE Alu 1 301 -10 236 277 45 90 chr5 161383043 161383152 -38246998 + MER5A DNA MER1_type 84 184 -5 223 289 19 67 chr5 161383179 161383283 -38246867 + L2 LINE L2 3199 3297 -16 802 201 28 3 chr5 161383402 161383610 -38246540 + L1M2 LINE L1 5609 5823 -345 237 162 44 0 chr5 161383610 161383678 -38246472 + (TA)n Simple_repeat Simple_repeat 2 72 0 2692 120 41 43 chr5 161383678 161384188 -38245962 + L1MA6 LINE L1 5782 6290 -10 26 50 0 0 chr5 161384190 161384230 -38245920 + AT_rich Low_complexity Low_complexity 1 40 0 324 308 185 0 chr5 161386526 161386672 -38243478 + MIR SINE MIR 3 175 -87 620 287 44 0 chr5 161386793 161386974 -38243176 - MIR SINE MIR -37 225 37 592 229 74 11 chr5 161388089 161388264 -38241886 - Charlie8 DNA MER1_type -2168 249 64 303 311 47 54 chr5 161388381 161388529 -38241621 - MIR3 SINE MIR -14 194 48 346 264 132 0 chr5 161388978 161389099 -38241051 - MIR3 SINE MIR -37 171 35 339 85 0 0 chr5 161389279 161389326 -38240824 + (GA)n Simple_repeat Simple_repeat 2 48 0 419 237 32 19 chr5 161390487 161390505 -38239645 - L1MA10 LINE L1 -2 6332 6315 1719 202 105 91 chr5 161390505 161390644 -38239506 - L1ME1 LINE L1 -12 6223 6087 1980 142 14 0 chr5 161390644 161390939 -38239211 - AluSx SINE Alu -13 299 1 1719 202 105 91 chr5 161390939 161391171 -38238979 - L1ME1 LINE L1 -148 6087 5860 2459 96 0 0 chr5 161391171 161391474 -38238676 - AluSg SINE Alu -7 303 1 1719 202 105 91 chr5 161391474 161391679 -38238471 - L1ME1 LINE L1 -375 5860 5659 5226 129 24 4 chr5 161391679 161393535 -38236615 - L1PA15 LINE L1 -1 6164 4282 1719 202 105 91 chr5 161393535 161393642 -38236508 - L1ME1 LINE L1 -576 5659 5555 3483 50 5 2 chr5 161393642 161394083 -38236067 + L1PA5 LINE L1 5708 6149 -5 1719 202 105 91 chr5 161394083 161394188 -38235962 - L1ME1 LINE L1 -680 5555 5421 873 258 46 30 chr5 161394155 161394612 -38235538 - L1ME1 LINE L1 -1949 4266 3786 * 3791 249 69 15 chr5 161394624 161396359 -38233791 - L1ME1 LINE L1 -2484 3731 1931 264 357 78 8 chr5 161396750 161396879 -38233271 + L2 LINE L2 3127 3264 -8 332 298 185 0 chr5 161398684 161398835 -38231315 - MIR SINE MIR -37 225 47 1242 115 0 0 chr5 161398839 161399022 -38231128 + L1PA13 LINE L1 5978 6160 -3 1038 255 196 50 chr5 161399774 161400642 -38229508 - L2 LINE L2 -6 3307 2316 388 331 45 0 chr5 161400747 161400880 -38229270 + L2 LINE L2 3134 3272 0 368 278 20 7 chr5 161401810 161401961 -38228189 - MER103 DNA DNA -1 165 13 320 295 19 48 chr5 161402085 161402190 -38227960 + MIR SINE MIR 20 121 -141 569 253 0 65 chr5 161402353 161402507 -38227643 + MIR SINE MIR 1 143 -67 481 287 63 59 chr5 161403390 161403627 -38226523 + MIR SINE MIR 25 262 0 796 293 48 16 chr5 161404209 161404458 -38225692 - MIR SINE MIR 0 262 6 182 351 0 0 chr5 161404636 161404693 -38225457 - L2 LINE L2 -11 3261 3205 298 266 206 27 chr5 161404741 161404811 -38225339 + MIR SINE MIR 46 102 -160 198 0 0 0 chr5 161404811 161404833 -38225317 + (TC)n Simple_repeat Simple_repeat 1 22 0 298 266 206 27 chr5 161404833 161404946 -38225204 + MIR SINE MIR 102 262 0 218 366 0 10 chr5 161405083 161405184 -38224966 - MER5A DNA MER1_type -3 186 87 1443 175 122 32 chr5 161405329 161405672 -38224478 - MLT1A2 LTR MaLR 0 374 1 189 0 0 0 chr5 161406175 161406196 -38223954 + (ATG)n Simple_repeat Simple_repeat 2 22 0 434 238 112 28 chr5 161406236 161406379 -38223771 - MIR SINE MIR -67 195 41 324 302 23 31 chr5 161407280 161407409 -38222741 + MIR SINE MIR 119 246 -16 367 324 20 0 chr5 161407420 161407568 -38222582 + (CTA)n Simple_repeat Simple_repeat 1 151 0 317 255 62 68 chr5 161408067 161408228 -38221922 - MLT1K LTR MaLR -71 517 358 2314 64 0 4 chr5 161408693 161408974 -38221176 + AluY SINE Alu 16 295 -16 1094 62 0 0 chr5 161409289 161409419 -38220731 + AluY SINE Alu 2 131 -180 218 119 0 24 chr5 161409421 161409463 -38220687 + (CAAAAA)n Simple_repeat Simple_repeat 4 44 0 2466 69 7 0 chr5 161409634 161409939 -38220211 - AluY SINE Alu -4 307 1 410 327 64 14 chr5 161409962 161410182 -38219968 - MLT1K LTR MaLR -292 296 66 231 287 58 58 chr5 161410262 161410349 -38219801 + L2 LINE L2 3180 3266 -6 1830 178 64 13 chr5 161410961 161411338 -38218812 + MSTD LTR MaLR 1 396 0 2171 123 0 0 chr5 161411734 161412034 -38218116 + AluSx SINE Alu 1 300 -12 2044 137 7 0 chr5 161412731 161413031 -38217119 + AluSx SINE Alu 1 302 -10 264 293 48 14 chr5 161413128 161413275 -38216875 - L1ME4a LINE L1 -31 6090 5939 2947 202 59 4 chr5 161413309 161414002 -38216148 + L1MD2 LINE L1 5614 6344 -15 250 247 34 113 chr5 161414029 161414268 -38215882 - L1ME4a LINE L1 -253 5868 5649 526 255 46 160 chr5 161414521 161415110 -38215040 + MLT1G LTR MaLR 62 583 -7 396 333 116 18 chr5 161415137 161415362 -38214788 + MIR SINE MIR 1 247 -15 762 264 47 5 chr5 161415559 161415771 -38214379 - MER58A DNA MER1_type -3 221 1 415 280 35 35 chr5 161416151 161416294 -38213856 + MIR3 SINE MIR 3 145 -63 234 404 44 7 chr5 161416388 161416524 -38213626 + L2 LINE L2 3169 3309 -4 2092 122 3 29 chr5 161417663 161417974 -38212176 - AluSx SINE Alu -9 303 1 277 230 92 11 chr5 161418370 161418457 -38211693 - MIR SINE MIR -109 153 60 2096 172 121 71 chr5 161418570 161418953 -38211197 - MLT2B1 LTR ERVL 0 520 105 1899 169 128 13 chr5 161418953 161419337 -38210813 - MSTA LTR MaLR 0 428 1 2096 172 121 71 chr5 161419337 161419448 -38210702 - MLT2B1 LTR ERVL -415 105 1 2389 253 132 17 chr5 161419644 161419686 -38210464 - L1ME2 LINE L1 -15 6149 6113 906 205 55 10 chr5 161419686 161419886 -38210264 + MER6B DNA MER2_type 1 209 -1 2389 253 132 17 chr5 161419886 161421355 -38208795 - L1ME2 LINE L1 -51 6113 4458 8728 245 34 12 chr5 161421362 161423716 -38206434 - L1MA4A LINE L1 -13 6992 4452 2046 133 0 38 chr5 161423716 161424031 -38206119 + AluSg SINE Alu 1 303 -7 8728 245 34 12 chr5 161424031 161425594 -38204556 - L1MA4A LINE L1 -2553 4452 2926 591 156 0 28 chr5 161425677 161425786 -38204364 - L1MA4A LINE L1 -4262 2587 2482 197 143 48 0 chr5 161425803 161425845 -38204305 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 304 272 0 43 chr5 161425847 161425939 -38204211 + L1MC4 LINE L1 6614 6701 -1341 246 62 0 0 chr5 161425949 161425981 -38204169 + (TA)n Simple_repeat Simple_repeat 2 33 0 243 0 0 0 chr5 161425981 161426008 -38204142 + (GA)n Simple_repeat Simple_repeat 2 28 0 1200 168 16 0 chr5 161426026 161426217 -38203933 - AluJb SINE Alu -108 204 11 93 73 0 0 chr5 161426221 161426412 -38203738 + AT_rich Low_complexity Low_complexity 1 191 0 195 50 0 0 chr5 161426415 161426715 -38203435 + AT_rich Low_complexity Low_complexity 1 300 0 21 0 0 0 chr5 161426697 161426718 -38203432 + AT_rich Low_complexity Low_complexity 1 21 0 * 1810 170 82 10 chr5 161426718 161427130 -38203020 - L1M2 LINE L1 -3960 3249 2808 * 16850 163 21 5 chr5 161427127 161431218 -38198932 - L1PA13 LINE L1 -3 6160 2009 283 86 0 7 chr5 161431220 161431264 -38198886 - MSTA LTR MaLR -322 42 1 9993 124 19 32 chr5 161431264 161432866 -38197284 - THE1C-int LTR MaLR 0 1580 1 1266 139 72 70 chr5 161432866 161433297 -38196853 - THE1C LTR MaLR 0 375 1 5400 199 35 67 chr5 161433305 161434771 -38195379 - L1M2 LINE L1 -4418 2791 1344 1936 244 78 2 chr5 161434903 161435354 -38194796 - L1M2 LINE L1 -6362 847 363 3482 234 89 80 chr5 161435356 161435920 -38194230 - L1MCa LINE L1 -1676 4750 4193 302 128 0 0 chr5 161435920 161435967 -38194183 - Tigger5 DNA MER2_type 0 2323 2277 3482 234 89 80 chr5 161435967 161435980 -38194170 - L1MCa LINE L1 -2233 4193 4182 2176 109 10 3 chr5 161435980 161436284 -38193866 + AluSx SINE Alu 1 306 -6 3482 234 89 80 chr5 161436284 161436558 -38193592 - L1MCa LINE L1 -2244 4182 3912 757 208 0 0 chr5 161436558 161436688 -38193462 - FLAM_C SINE Alu -2 131 2 3482 234 89 80 chr5 161436688 161437551 -38192599 - L1MCa LINE L1 -2514 3912 3058 2439 130 16 29 chr5 161437551 161437997 -38192153 - L1PA13 LINE L1 -1 6162 5723 3482 234 89 80 chr5 161437997 161438460 -38191690 - L1MCa LINE L1 -3368 3058 2517 3189 138 39 14 chr5 161438460 161438974 -38191176 - MER1A DNA MER1_type 0 527 1 3482 234 89 80 chr5 161438974 161439265 -38190885 - L1MCa LINE L1 -3909 2517 2230 * 6137 48 0 0 chr5 161439247 161439999 -38190151 - L1PA5 LINE L1 0 6154 5403 28847 122 18 67 chr5 161439999 161441141 -38189009 - L1PA8 LINE L1 -103 6069 4873 2176 104 7 0 chr5 161441141 161441430 -38188720 - AluSp SINE Alu -22 291 1 28847 122 18 67 chr5 161441430 161444776 -38185374 - L1PA8 LINE L1 -1299 4873 1994 2391 191 77 9 chr5 161444776 161445319 -38184831 + LTR22 LTR ERVK 1 580 0 28847 122 18 67 chr5 161445319 161447219 -38182931 - L1PA8 LINE L1 -4178 1994 3 293 275 82 33 chr5 161447701 161447883 -38182267 - HAL1b LINE L1 -433 915 725 245 183 70 42 chr5 161447908 161447979 -38182171 - HAL1b LINE L1 -687 661 589 1892 159 125 46 chr5 161447985 161448018 -38182132 - MLT1C LTR MaLR 0 467 438 6097 149 65 18 chr5 161448018 161449193 -38180957 + Tigger3b DNA MER2_type 1 1230 -1 1892 159 125 46 chr5 161449193 161449592 -38180558 - MLT1C LTR MaLR -29 438 1 4791 134 46 27 chr5 161450323 161451815 -38178335 + L1PA15 LINE L1 4666 6164 -1 1130 182 88 10 chr5 161452185 161452482 -38177668 + MER33 DNA MER1_type 1 320 -4 230 231 0 19 chr5 161452490 161452542 -38177608 + L2 LINE L2 3222 3272 0 516 272 98 38 chr5 161452657 161452892 -38177258 + MIR SINE MIR 14 262 0 396 344 58 54 chr5 161453740 161453964 -38176186 + MIR SINE MIR 20 244 -18 2715 157 64 15 chr5 161455500 161456080 -38174070 + L1MA9 LINE L1 5157 5781 -531 207 0 0 0 chr5 161456081 161456104 -38174046 + (TG)n Simple_repeat Simple_repeat 1 23 0 3432 133 48 2 chr5 161456106 161456670 -38173480 + HSMAR2 DNA Mariner 4 593 -709 981 261 115 8 chr5 161456676 161456823 -38173327 - AluSg SINE Alu -19 291 161 525 99 0 0 chr5 161456823 161456904 -38173246 + (TGGA)n Simple_repeat Simple_repeat 3 83 0 228 35 0 0 chr5 161456903 161456932 -38173218 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 * 981 261 115 8 chr5 161456904 161457045 -38173105 - AluSg SINE Alu -149 161 3 4558 111 35 4 chr5 161457046 161457742 -38172408 + HSMAR2 DNA Mariner 580 1296 -6 2215 163 34 48 chr5 161457747 161458243 -38171907 + L1MA9 LINE L1 5785 6273 -39 560 266 68 31 chr5 161458456 161458648 -38171502 + MIR SINE MIR 63 261 -1 454 299 47 39 chr5 161458962 161459196 -38170954 - MIR SINE MIR -20 242 7 2381 99 0 0 chr5 161459629 161459942 -38170208 + AluSq SINE Alu 1 313 0 528 306 26 52 chr5 161459942 161460174 -38169976 + MIR SINE MIR 20 245 -17 233 341 31 47 chr5 161460820 161460949 -38169201 + MIR SINE MIR 25 151 -57 250 274 214 0 chr5 161460955 161461039 -38169111 + L2 LINE L2 3193 3294 -19 272 362 19 9 chr5 161461462 161461567 -38168583 - MIR SINE MIR -129 133 28 644 205 53 63 chr5 161461654 161461844 -38168306 - MIR SINE MIR -2 260 73 235 222 0 0 chr5 161462316 161462361 -38167789 - L2 LINE L2 0 3272 3228 22 0 0 0 chr5 161462373 161462395 -38167755 + AT_rich Low_complexity Low_complexity 1 22 0 393 269 83 65 chr5 161462459 161462661 -38167489 - MIR SINE MIR -1 261 49 195 304 0 0 chr5 161462690 161462746 -38167404 - MIR SINE MIR -67 195 140 327 250 25 0 chr5 161462949 161463029 -38167121 - MIR SINE MIR -120 142 61 234 311 0 0 chr5 161463584 161463645 -38166505 + MIR SINE MIR 85 145 -63 299 255 20 41 chr5 161464460 161464558 -38165592 - L1MEd LINE L1 -5423 696 601 760 222 7 0 chr5 161465187 161465331 -38164819 + MER5A DNA MER1_type 9 153 -36 247 267 35 12 chr5 161466352 161466438 -38163712 + MIR SINE MIR 175 262 0 280 381 95 18 chr5 161466837 161467005 -38163145 - MIR3 SINE MIR -13 195 15 290 286 0 13 chr5 161467347 161467424 -38162726 + CT-rich Low_complexity Low_complexity 2 77 0 313 295 83 39 chr5 161467631 161467787 -38162363 + MIR SINE MIR 1 163 -99 2400 94 0 7 chr5 161467878 161468186 -38161964 + AluY SINE Alu 1 306 -5 386 272 92 53 chr5 161468200 161468432 -38161718 + MLT1L LTR MaLR 110 409 -202 231 167 167 0 chr5 161468558 161468618 -38161532 + MER116 DNA Mariner 3 72 -8 261 243 100 0 chr5 161468829 161468899 -38161251 + MIR SINE MIR 185 261 -1 3222 128 43 0 chr5 161469454 161469961 -38160189 - MER1A DNA MER1_type 0 529 1 411 200 57 19 chr5 161470167 161470272 -38159878 - MER112 DNA MER1_type -58 202 94 1660 194 40 0 chr5 161470274 161470646 -38159504 - Charlie1 DNA MER1_type -185 2576 2190 849 105 0 0 chr5 161470659 161470783 -38159367 - L1PB3 LINE L1 -1 6153 6030 869 224 50 118 chr5 161470869 161471352 -38158798 - L2 LINE L2 -45 3268 2794 186 133 0 0 chr5 161471654 161471684 -38158466 + (A)n Simple_repeat Simple_repeat 1 30 0 194 257 149 27 chr5 161472062 161472136 -38158014 + L2 LINE L2 3224 3306 -7 204 281 62 0 chr5 161472262 161472326 -38157824 - MIR SINE MIR 0 262 195 189 282 42 28 chr5 161472791 161472862 -38157288 - MIR SINE MIR -142 120 49 205 247 146 22 chr5 161473008 161473097 -38157053 + MIR SINE MIR 40 139 -69 231 61 0 0 chr5 161473549 161473582 -38156568 + (CA)n Simple_repeat Simple_repeat 2 34 0 190 333 37 37 chr5 161474249 161474357 -38155793 - MIR SINE MIR -84 124 17 22 0 0 0 chr5 161474745 161474767 -38155383 + AT_rich Low_complexity Low_complexity 1 22 0 5966 52 3 0 chr5 161475154 161475890 -38154260 + L1PA5 LINE L1 5414 6151 -3 249 294 252 17 chr5 161475924 161476104 -38154046 + MIR SINE MIR 42 262 0 2914 192 22 19 chr5 161476138 161476785 -38153365 + L1MC3 LINE L1 7130 7778 -7 261 291 45 55 chr5 161476794 161476904 -38153246 + L3 LINE CR1 1462 1570 -7 582 306 29 5 chr5 161477200 161477406 -38152744 - MIR SINE MIR 0 262 52 1766 146 188 0 chr5 161477522 161477878 -38152272 + MSTA LTR MaLR 1 423 -5 21 0 0 0 chr5 161477981 161478002 -38152148 + AT_rich Low_complexity Low_complexity 1 21 0 344 340 43 19 chr5 161478337 161478470 -38151680 - MIR SINE MIR -1 261 120 2188 114 3 19 chr5 161478470 161478785 -38151365 + AluSg SINE Alu 1 310 0 344 340 43 19 chr5 161478785 161478860 -38151290 - MIR SINE MIR -142 120 48 226 294 11 33 chr5 161479159 161479251 -38150899 + MIR SINE MIR 78 167 -95 307 322 99 6 chr5 161479358 161479529 -38150621 - MIR SINE MIR -10 252 66 238 277 69 35 chr5 161480161 161480274 -38149876 + MIR SINE MIR 7 124 -84 285 323 147 31 chr5 161480327 161480680 -38149470 + L2 LINE L2 2440 2833 -481 691 288 82 51 chr5 161480680 161481093 -38149057 - MLT1K LTR MaLR 0 588 163 881 261 90 55 chr5 161481251 161481738 -38148412 - MLT1H1 LTR MaLR -35 520 17 268 335 161 41 chr5 161481789 161482031 -38148119 + L2 LINE L2 2916 3186 -86 239 253 30 50 chr5 161482773 161482872 -38147278 + L1ME4a LINE L1 5549 5645 -476 300 291 40 25 chr5 161482884 161483083 -38147067 + L1ME4a LINE L1 5741 5942 -220 202 250 0 42 chr5 161483361 161483433 -38146717 + (CATA)n Simple_repeat Simple_repeat 2 70 0 246 211 109 23 chr5 161483480 161483608 -38146542 + L1ME4a LINE L1 5968 6106 -15 640 299 21 23 chr5 161484462 161484696 -38145454 - MIR SINE MIR -14 248 17 215 274 36 15 chr5 161484723 161484838 -38145312 - MIR SINE MIR -51 211 93 189 0 0 0 chr5 161484963 161484984 -38145166 + (A)n Simple_repeat Simple_repeat 1 21 0 275 223 21 105 chr5 161485250 161485277 -38144873 + MLT1K LTR MaLR 83 111 -477 2114 113 3 0 chr5 161485277 161485560 -38144590 + AluSp SINE Alu 19 302 -11 2627 95 17 3 chr5 161485561 161485920 -38144230 + THE1B LTR MaLR 1 364 0 275 223 21 105 chr5 161485920 161486018 -38144132 + MLT1K LTR MaLR 110 212 -376 2137 112 3 24 chr5 161486217 161486513 -38143637 + AluSx SINE Alu 1 290 -22 30 0 0 0 chr5 161487396 161487426 -38142724 + AT_rich Low_complexity Low_complexity 1 30 0 7434 37 0 0 chr5 161487426 161488634 -38141516 - L1PA5 LINE L1 -11 6143 4935 10054 44 0 2 chr5 161488634 161489935 -38140215 + L1PA5 LINE L1 3658 4955 -1191 2200 129 0 3 chr5 161490173 161490483 -38139667 - AluSc SINE Alu 0 309 1 23 0 0 0 chr5 161490486 161490509 -38139641 + AT_rich Low_complexity Low_complexity 1 23 0 417 226 19 50 chr5 161490895 161491054 -38139096 + L1ME LINE L1 5191 5344 -802 255 291 16 55 chr5 161491250 161491377 -38138773 + L1ME LINE L1 5450 5571 -591 383 61 0 0 chr5 161492261 161492310 -38137840 - THE1B LTR MaLR -1 363 315 933 146 7 0 chr5 161492312 161492449 -38137701 - AluSg/x SINE Alu -15 297 160 597 244 134 14 chr5 161493380 161493597 -38136553 + MIR SINE MIR 4 246 -16 1659 183 25 48 chr5 161493800 161493968 -38136182 - MER7A DNA MER2_type -2692 346 176 1347 101 83 28 chr5 161493968 161494186 -38135964 + MER30 DNA MER1_type 1 230 0 1659 183 25 48 chr5 161494186 161494373 -38135777 - MER7A DNA MER2_type -2862 176 1 293 175 18 0 chr5 161494650 161494707 -38135443 - MLT1H LTR MaLR -4 545 488 710 253 58 27 chr5 161494761 161495089 -38135061 - MLT1H LTR MaLR -211 338 1 576 221 15 0 chr5 161495292 161495428 -38134722 - Charlie8 DNA MER1_type -2193 224 87 414 237 0 0 chr5 161495791 161495867 -38134283 + MIR SINE MIR 18 93 -169 473 288 88 18 chr5 161496054 161496224 -38133926 - MIR SINE MIR -49 213 32 430 263 153 7 chr5 161496602 161496739 -38133411 + MIR SINE MIR 74 230 -32 24 0 0 0 chr5 161497228 161497252 -38132898 + AT_rich Low_complexity Low_complexity 1 24 0 647 181 141 126 chr5 161497519 161497999 -38132151 - LTR59 LTR ERV1 0 597 136 395 217 23 23 chr5 161498081 161498197 -38131953 - MER4A LTR ERV1 -349 116 1 767 326 70 30 chr5 161498323 161498962 -38131188 - L2 LINE L2 -1 3312 2646 855 197 48 159 chr5 161498962 161499222 -38130928 - MLT1A2 LTR MaLR 0 374 177 3578 42 0 0 chr5 161499222 161499654 -38130496 - L1PA5 LINE L1 -6 6148 5717 855 197 48 159 chr5 161499654 161499814 -38130336 - MLT1A2 LTR MaLR -197 177 1 279 262 71 0 chr5 161499816 161499900 -38130250 - L2 LINE L2 -675 2639 2550 11553 98 12 1 chr5 161501003 161502823 -38127327 + L1M4 LINE L1 3617 5452 -726 1276 190 16 67 chr5 161503124 161503163 -38126987 - MLT1A1 LTR MaLR -11 354 315 2176 71 11 3 chr5 161503163 161503445 -38126705 - AluY SINE Alu -8 303 20 1276 190 16 67 chr5 161503445 161503778 -38126372 - MLT1A1 LTR MaLR -50 315 1 529 113 0 0 chr5 161503782 161503862 -38126288 - MADE1 DNA Mariner 0 80 1 287 369 54 20 chr5 161504620 161504769 -38125381 - MIR SINE MIR -76 186 33 267 260 0 41 chr5 161504926 161504999 -38125151 - L2 LINE L2 0 3313 3244 245 282 62 72 chr5 161505140 161505335 -38124815 + LTR16C LTR ERVL 295 487 -4 433 348 43 33 chr5 161505846 161506214 -38123936 + ERVL LTR ERVL 4704 5075 -689 2686 130 55 6 chr5 161506591 161507083 -38123067 - L1MA6 LINE L1 0 6300 5785 2892 146 16 21 chr5 161507083 161507814 -38122336 + L1MA6 LINE L1 5068 5788 -512 4049 196 39 67 chr5 161507885 161508573 -38121577 - MSTD-int LTR MaLR -721 1014 363 1846 162 3 10 chr5 161508573 161508887 -38121263 - AluJo SINE Alu 0 312 1 4049 196 39 67 chr5 161508887 161509241 -38120909 - MSTD-int LTR MaLR -1372 363 1 703 204 82 38 chr5 161509263 161509567 -38120583 - MSTD LTR MaLR -38 327 1 253 266 31 0 chr5 161510198 161510262 -38119888 - MIR3 SINE MIR -30 178 113 479 293 24 0 chr5 161510318 161510441 -38119709 - L2 LINE L2 -1 3271 3146 1215 196 80 59 chr5 161510529 161510917 -38119233 + MSTD LTR MaLR 1 396 0 217 275 55 33 chr5 161511133 161511224 -38118926 + MER5A DNA MER1_type 81 173 -16 * 345 311 19 0 chr5 161511148 161511251 -38118899 - MER5A DNA MER1_type -83 106 2 24 77 0 0 chr5 161511855 161511907 -38118243 + AT_rich Low_complexity Low_complexity 1 52 0 1350 65 0 0 chr5 161512140 161512310 -38117840 - L1PA8 LINE L1 -12 6160 5991 21 0 0 0 chr5 161512885 161512906 -38117244 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr5 161513961 161513985 -38116165 + (GAAA)n Simple_repeat Simple_repeat 1 24 0 323 209 9 55 chr5 161514305 161514415 -38115735 - MER117 DNA MER1_type -55 142 38 189 0 0 0 chr5 161514496 161514517 -38115633 + (A)n Simple_repeat Simple_repeat 1 21 0 1350 221 38 0 chr5 161514581 161514898 -38115252 + MER58B DNA MER1_type 1 329 -12 182 296 86 0 chr5 161516382 161516463 -38113687 + MIR SINE MIR 102 189 -73 386 309 120 17 chr5 161517071 161517246 -38112904 + MIR SINE MIR 20 212 -50 227 299 56 37 chr5 161517780 161517887 -38112263 - MIR3 SINE MIR -11 197 89 240 316 211 7 chr5 161518026 161518178 -38111972 + MIR SINE MIR 80 262 0 629 115 19 0 chr5 161518736 161518840 -38111310 + CT-rich Low_complexity Low_complexity 1 106 0 1867 154 9 28 chr5 161518849 161519167 -38110983 - AluJo SINE Alu 0 312 1 318 50 0 0 chr5 161520035 161520075 -38110075 + (TG)n Simple_repeat Simple_repeat 2 41 0 16308 132 11 101 chr5 161520219 161520621 -38109529 + L1P LINE L1 12 449 -5697 254 51 34 34 chr5 161520621 161520680 -38109470 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 16308 132 11 101 chr5 161520680 161523653 -38106497 + L1P LINE L1 449 3083 -3063 7394 64 7 1 chr5 161523654 161524699 -38105451 + L1PA7 LINE L1 5108 6154 0 3154 171 11 5 chr5 161524718 161525286 -38104864 + L1MB3 LINE L1 5593 6163 -20 280 339 26 73 chr5 161525860 161526052 -38104098 + L2 LINE L2 2877 3059 -213 391 357 27 30 chr5 161526301 161526564 -38103586 - MIR SINE MIR 0 262 1 261 341 66 0 chr5 161526875 161526966 -38103184 + L2 LINE L2 3146 3242 -30 518 325 115 24 chr5 161527981 161528416 -38101734 - L2 LINE L2 -37 3276 2797 455 250 36 113 chr5 161528996 161529244 -38100906 - MIR SINE MIR -19 243 15 405 0 0 0 chr5 161529438 161529483 -38100667 + (TA)n Simple_repeat Simple_repeat 1 45 0 232 342 125 8 chr5 161529720 161529840 -38100310 + MIR3 SINE MIR 61 194 -14 200 338 0 26 chr5 161529999 161530076 -38100074 - L2 LINE L2 -38 3234 3160 561 280 42 11 chr5 161530123 161530312 -38099838 + Charlie8 DNA MER1_type 28 222 -2195 304 218 68 48 chr5 161530606 161530724 -38099426 + MIR SINE MIR 31 149 -78 2238 186 107 17 chr5 161530947 161534091 -38096059 - SATR1 Satellite Satellite -1 3427 1 35 63 0 0 chr5 161534108 161534171 -38095979 + AT_rich Low_complexity Low_complexity 1 63 0 350 219 16 53 chr5 161534197 161534384 -38095766 + (TTA)n Simple_repeat Simple_repeat 1 180 0 26 30 0 0 chr5 161534394 161534427 -38095723 + AT_rich Low_complexity Low_complexity 1 33 0 2346 189 103 6 chr5 161534433 161537363 -38092787 + SATR1 Satellite Satellite 1 3211 -1 2039 216 95 19 chr5 161537393 161538933 -38091217 - SATR1 Satellite Satellite -85 1655 1 363 78 0 0 chr5 161539223 161539274 -38090876 + (CAGCC)n Simple_repeat Simple_repeat 4 54 0 260 168 0 81 chr5 161539757 161539833 -38090317 + L1PA8A LINE L1 5761 5830 -312 2410 71 0 3 chr5 161541246 161541540 -38088610 + AluY SINE Alu 1 293 -18 229 329 0 0 chr5 161542225 161542295 -38087855 - MIR SINE MIR -6 256 187 347 271 69 87 chr5 161542381 161542599 -38087551 + MER102a DNA MER1_type 117 330 0 229 258 290 0 chr5 161542599 161542723 -38087427 - MIR SINE MIR -98 164 5 217 269 32 13 chr5 161542925 161543081 -38087069 + (TA)n Simple_repeat Simple_repeat 2 160 0 189 257 14 40 chr5 161543216 161543290 -38086860 - MIR SINE MIR -96 166 95 281 304 175 41 chr5 161544667 161544838 -38085312 + MIR3 SINE MIR 15 208 0 618 250 162 61 chr5 161544895 161545339 -38084811 - MLT1J LTR MaLR -7 504 16 2444 28 0 3 chr5 161545412 161545727 -38084423 + AluY SINE Alu 1 314 0 551 316 51 54 chr5 161546512 161546866 -38083284 - L2 LINE L2 -29 3284 2932 41 48 0 0 chr5 161547311 161547373 -38082777 + AT_rich Low_complexity Low_complexity 1 62 0 2125 107 3 14 chr5 161547672 161547963 -38082187 + AluSc SINE Alu 1 288 -21 3281 178 28 5 chr5 161548078 161548679 -38081471 - L1MB3 LINE L1 0 6183 5569 630 274 6 0 chr5 161548946 161549110 -38081040 + MIR SINE MIR 93 257 -5 285 253 105 0 chr5 161550620 161550715 -38079435 - MER103 DNA DNA -10 156 52 22 56 0 0 chr5 161550726 161550762 -38079388 + AT_rich Low_complexity Low_complexity 1 36 0 1711 190 14 40 chr5 161551796 161552055 -38078095 - MER58B DNA MER1_type -2082 338 89 2393 86 3 0 chr5 161552055 161552357 -38077793 + AluSp SINE Alu 1 303 -10 1711 190 14 40 chr5 161552357 161552444 -38077706 - MER58B DNA MER1_type -2331 89 1 748 218 35 0 chr5 161553440 161553614 -38076536 + MIR SINE MIR 83 262 0 2295 96 13 0 chr5 161553847 161554148 -38076002 + AluSx SINE Alu 2 306 -6 766 291 159 43 chr5 161554168 161554875 -38075275 - L2 LINE L2 -708 2606 1802 2500 66 0 3 chr5 161554875 161555180 -38074970 + AluY SINE Alu 1 304 -7 766 291 159 43 chr5 161555180 161555241 -38074909 - L2 LINE L2 -1512 1802 1749 401 293 19 0 chr5 161555353 161555459 -38074691 + MER45 DNA AcHobo 1 108 -845 202 292 31 0 chr5 161555663 161555728 -38074422 - MIR SINE MIR -138 124 58 802 160 0 0 chr5 161556136 161556255 -38073895 + FLAM_C SINE Alu 1 119 -24 565 183 0 0 chr5 161556286 161556379 -38073771 + AluJb SINE Alu 207 299 -13 29 0 0 0 chr5 161556467 161556496 -38073654 + AT_rich Low_complexity Low_complexity 1 29 0 334 224 122 0 chr5 161556818 161556925 -38073225 - L1ME4a LINE L1 -11 6110 5991 431 222 91 40 chr5 161556943 161557119 -38073031 + L2 LINE L2 3074 3258 -55 1121 115 0 19 chr5 161557714 161557871 -38072279 - AluSx SINE Alu -158 154 1 847 171 38 66 chr5 161558215 161558470 -38071680 - MLT1C LTR MaLR -127 263 17 288 298 204 11 chr5 161558470 161558651 -38071499 + MIR SINE MIR 47 262 0 1564 199 56 37 chr5 161558675 161559073 -38071077 - LTR10A LTR ERV1 -61 548 69 2269 75 14 3 chr5 161559073 161559368 -38070782 + AluY SINE Alu 1 298 -13 1564 199 56 37 chr5 161559368 161559439 -38070711 - LTR10A LTR ERV1 -540 69 1 11887 159 18 29 chr5 161559440 161560717 -38069433 - Harlequin LTR ERV1 -2 6647 5357 2430 81 3 3 chr5 161560717 161561027 -38069123 - AluSp SINE Alu -3 310 1 11887 159 18 29 chr5 161561027 161562914 -38067236 - Harlequin LTR ERV1 -1292 5357 1808 226 286 182 0 chr5 161562916 161562993 -38067157 + LTR8 LTR ERV1 163 253 -438 5131 88 59 33 chr5 161562995 161563759 -38066391 - Harlequin LTR ERV1 -5176 1720 991 923 38 0 0 chr5 161563759 161563865 -38066285 - L1PA5 LINE L1 0 6154 6049 5131 88 59 33 chr5 161563865 161564161 -38065989 - Harlequin LTR ERV1 -5905 991 704 644 92 58 0 chr5 161564161 161564406 -38065744 + CT-rich Low_complexity Low_complexity 1 259 0 539 274 71 42 chr5 161564826 161564847 -38065303 + MIR SINE MIR 14 33 -229 2422 93 0 3 chr5 161564847 161565157 -38064993 + AluSq SINE Alu 1 309 -4 539 274 71 42 chr5 161565157 161565347 -38064803 + MIR SINE MIR 33 231 -31 339 364 68 23 chr5 161566091 161566311 -38063839 + MIR SINE MIR 20 249 -13 537 255 5 75 chr5 161566331 161566543 -38063607 - L2 LINE L2 0 3313 3117 929 278 138 22 chr5 161566893 161567340 -38062810 - L2 LINE L2 -287 3026 2524 41 66 0 0 chr5 161567357 161567433 -38062717 + AT_rich Low_complexity Low_complexity 1 76 0 2032 106 0 17 chr5 161567545 161567837 -38062313 - AluSq SINE Alu -26 287 1 354 271 21 22 chr5 161567883 161568018 -38062132 - MIR SINE MIR -84 124 45 531 170 4 17 chr5 161568261 161568495 -38061655 + (TA)n Simple_repeat Simple_repeat 1 230 0 297 68 0 0 chr5 161568503 161568547 -38061603 + (A)n Simple_repeat Simple_repeat 1 44 0 1062 89 0 0 chr5 161568547 161568716 -38061434 + (TA)n Simple_repeat Simple_repeat 1 169 0 1093 236 0 0 chr5 161568716 161568924 -38061226 - MER6B DNA MER2_type -2 208 1 372 303 57 68 chr5 161569027 161569291 -38060859 - Charlie8 DNA MER1_type -2156 261 1 220 318 159 16 chr5 161569615 161569741 -38060409 + MIR3 SINE MIR 49 192 -16 1158 132 9 114 chr5 161570080 161570413 -38059737 - L1PA10 LINE L1 -19 6149 5852 638 180 0 7 chr5 161570565 161570704 -38059446 - L1PA6 LINE L1 -4 6150 6013 385 260 92 58 chr5 161571358 161571554 -38058596 - MIR SINE MIR -40 222 15 306 225 25 25 chr5 161572033 161572113 -38058037 + (CATA)n Simple_repeat Simple_repeat 4 83 0 1954 147 46 3 chr5 161572177 161572523 -38057627 + MER46B DNA MER2_type 1 236 0 6130 91 15 5 chr5 161572559 161573237 -38056913 + L1PB1 LINE L1 5105 5797 -354 195 42 0 0 chr5 161573237 161573261 -38056889 + (CATA)n Simple_repeat Simple_repeat 2 25 0 6130 91 15 5 chr5 161573261 161573620 -38056530 + L1PB1 LINE L1 5797 6151 0 22 0 0 0 chr5 161573775 161573797 -38056353 + AT_rich Low_complexity Low_complexity 1 22 0 355 300 30 0 chr5 161573926 161574026 -38056124 + MER5A DNA MER1_type 10 112 -77 2089 114 3 20 chr5 161574835 161575134 -38055016 - AluSg SINE Alu -16 294 1 315 221 47 35 chr5 161575498 161575518 -38054632 + MIR SINE MIR 176 194 -68 2162 117 7 0 chr5 161575518 161575817 -38054333 + AluSq SINE Alu 1 301 -12 315 221 47 35 chr5 161575817 161575882 -38054268 + MIR SINE MIR 194 262 0 324 285 80 7 chr5 161575900 161576037 -38054113 - L3b LINE CR1 -246 1337 1191 2250 92 0 0 chr5 161577007 161577291 -38052859 - AluSg SINE Alu 0 310 27 2143 105 20 3 chr5 161577289 161577585 -38052565 - AluSx SINE Alu -11 301 1 * 36496 32 24 1 chr5 161578037 161583299 -38046851 + L1PA2 LINE L1 571 5954 -201 8044 54 111 6 chr5 161583462 161584630 -38045520 - L1P LINE L1 -4852 1294 4 266 235 59 47 chr5 161586870 161586955 -38043195 - L2 LINE L2 0 3272 3187 288 394 28 0 chr5 161587235 161587415 -38042735 - MIR SINE MIR -32 230 46 3898 141 8 14 chr5 161587614 161588253 -38041897 + MER41B LTR ERV1 1 635 0 18630 112 64 39 chr5 161588255 161590087 -38040063 + MER41B-int LTR ERV1 3 1953 -3993 1434 143 131 38 chr5 161590087 161590430 -38039720 - THE1C LTR MaLR 0 375 1 18630 112 64 39 chr5 161590430 161591844 -38038306 + MER41B-int LTR ERV1 1953 3330 -2616 203 176 39 0 chr5 161591845 161591896 -38038254 + GA-rich Low_complexity Low_complexity 4 56 0 200 294 118 0 chr5 161591953 161592021 -38038129 + MIR SINE MIR 66 141 -121 2484 63 0 3 chr5 161592249 161592549 -38037601 + AluY SINE Alu 1 299 -12 7561 18 0 1 chr5 161592819 161593696 -38036454 + L1PA2 LINE L1 5278 6153 -2 23 33 0 0 chr5 161593711 161593741 -38036409 + AT_rich Low_complexity Low_complexity 1 30 0 297 268 47 72 chr5 161593792 161594416 -38035734 - L1MEc LINE L1 -3580 2549 1979 471 256 111 45 chr5 161594642 161595011 -38035139 - L1MEc LINE L1 -4571 1568 1180 251 240 64 16 chr5 161595119 161595244 -38034906 - L1MEc LINE L1 -5113 1019 889 342 383 91 0 chr5 161595363 161595616 -38034534 - L1MEc LINE L1 -5323 796 521 325 288 114 15 chr5 161596054 161596186 -38033964 + MIR SINE MIR 118 262 0 1712 132 0 0 chr5 161597620 161597863 -38032287 + AluSq SINE Alu 47 289 -24 360 329 88 0 chr5 161597870 161598007 -38032143 - MIR SINE MIR -21 241 93 196 403 89 0 chr5 161598088 161598212 -38031938 + L2 LINE L2 3179 3313 0 597 259 31 54 chr5 161598872 161599096 -38031054 - MIR SINE MIR -26 236 18 255 419 7 0 chr5 161599293 161599441 -38030709 - MIR3 SINE MIR -23 185 37 207 369 77 56 chr5 161599437 161599632 -38030518 - L2 LINE L2 0 3272 3074 * 2146 116 0 7 chr5 161599672 161599973 -38030177 - AluSg1 SINE Alu -10 299 1 238 356 6 6 chr5 161600079 161600259 -38029891 + (TA)n Simple_repeat Simple_repeat 1 180 0 381 294 50 32 chr5 161601090 161601265 -38028885 + MER5A DNA MER1_type 1 189 0 270 267 42 25 chr5 161602199 161602319 -38027831 - MER113 DNA MER1_type? -399 122 1 298 362 43 7 chr5 161602537 161602678 -38027472 + MIR SINE MIR 3 148 -114 926 126 77 38 chr5 161602678 161602774 -38027376 - MER46A DNA MER2_type 0 236 134 371 143 330 36 chr5 161602774 161602886 -38027264 + MER46A DNA MER2_type 3 147 -89 486 217 0 0 chr5 161603057 161603140 -38027010 + FRAM/FAM SINE Alu 1 81 -95 567 276 119 28 chr5 161603389 161603675 -38026475 - L1MC/D LINE L1 -2001 5807 5496 222 211 123 123 chr5 161603838 161603952 -38026198 - MIR3 SINE MIR -13 195 82 1400 154 131 12 chr5 161603962 161604221 -38025929 - AluSg1 SINE Alu -19 290 1 3328 117 55 148 chr5 161605093 161605817 -38024333 + Tigger3b DNA MER2_type 18 711 -2318 848 167 15 0 chr5 161605817 161605949 -38024201 + FLAM_C SINE Alu 1 134 -9 3328 117 55 148 chr5 161605949 161606427 -38023723 + Tigger3b DNA MER2_type 711 1232 0 399 286 31 0 chr5 161606462 161606560 -38023590 + MIR SINE MIR 42 142 -66 282 315 23 15 chr5 161606647 161606777 -38023373 - MLT1K LTR MaLR 0 588 458 1153 96 11 0 chr5 161606831 161607009 -38023141 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 536 119 34 17 chr5 161607011 161607129 -38023021 + CT-rich Low_complexity Low_complexity 3 122 0 1121 67 30 6 chr5 161607134 161607299 -38022851 - L1PB1 LINE L1 -51 6100 5932 265 318 262 0 chr5 161607313 161607420 -38022730 - MLT1K LTR MaLR -216 372 238 284 284 105 0 chr5 161607514 161607609 -38022541 - MLT1K LTR MaLR -467 121 17 1122 199 31 0 chr5 161607623 161607849 -38022301 - MLT1A1 LTR MaLR 0 365 133 673 198 0 0 chr5 161608010 161608136 -38022014 - MLT1A1 LTR MaLR -239 126 1 181 314 0 0 chr5 161608480 161608531 -38021619 + L2 LINE L2 2779 2829 -485 480 295 42 17 chr5 161609016 161609372 -38020778 - L1MEd LINE L1 -4969 1150 786 313 253 0 0 chr5 161609430 161609505 -38020645 - L1MEd LINE L1 -5443 676 602 2537 127 11 0 chr5 161610701 161611072 -38019078 - THE1C LTR MaLR 0 375 1 9816 117 34 10 chr5 161611072 161612097 -38018053 - THE1C-int LTR MaLR 0 1580 503 2691 99 0 0 chr5 161612097 161612450 -38017700 + THE1A LTR MaLR 3 355 0 9816 117 34 10 chr5 161612450 161612966 -38017184 - THE1C-int LTR MaLR -1077 503 1 2497 112 27 0 chr5 161612966 161613331 -38016819 - THE1C LTR MaLR 0 375 1 270 73 0 0 chr5 161613821 161613862 -38016288 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 252 0 0 0 chr5 161613862 161613890 -38016260 + (CA)n Simple_repeat Simple_repeat 1 28 0 585 243 133 44 chr5 161616155 161616381 -38013769 - MIR SINE MIR -2 260 15 210 343 121 18 chr5 161616920 161617096 -38013054 - L2 LINE L2 -83 3230 3074 1808 183 131 19 chr5 161617096 161617516 -38012634 - MLT1C LTR MaLR 0 467 1 210 343 121 18 chr5 161617516 161617650 -38012500 - L2 LINE L2 -239 3074 2883 243 286 211 3 chr5 161617924 161618051 -38012099 + MIR SINE MIR 19 146 -62 312 306 57 99 chr5 161618882 161618948 -38011202 - L1MC4a LINE L1 -1807 6001 5934 414 57 0 0 chr5 161618948 161619001 -38011149 + (TA)n Simple_repeat Simple_repeat 1 53 0 312 306 57 99 chr5 161619001 161619184 -38010966 - L1MC4a LINE L1 -1874 5934 5765 1283 186 138 15 chr5 161619184 161619335 -38010815 - AluJb SINE Alu 0 302 171 189 0 0 0 chr5 161619335 161619356 -38010794 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1283 186 138 15 chr5 161619356 161619473 -38010677 - AluJb SINE Alu -131 171 1 312 306 57 99 chr5 161619473 161619536 -38010614 - L1MC4a LINE L1 -2043 5765 5701 490 262 101 42 chr5 161619569 161619737 -38010413 + L2 LINE L2 3133 3310 -3 221 348 80 0 chr5 161619780 161619892 -38010258 + L2 LINE L2 3177 3297 -16 936 254 93 54 chr5 161620030 161620743 -38009407 + L2 LINE L2 2557 3304 -9 265 378 20 14 chr5 161620846 161620994 -38009156 + MIR SINE MIR 5 153 -109 372 271 176 43 chr5 161621563 161621773 -38008377 + MIR SINE MIR 25 262 0 252 325 24 24 chr5 161622028 161622154 -38007996 + L2 LINE L2 2988 3113 -159 217 263 38 0 chr5 161622288 161622368 -38007782 + MIR SINE MIR 179 261 -1 431 314 72 0 chr5 161622950 161623103 -38007047 - L2 LINE L2 -9 3304 3141 324 330 82 33 chr5 161624389 161624571 -38005579 + MIR SINE MIR 58 248 -14 190 389 59 32 chr5 161624647 161624986 -38005164 + L2 LINE L2 2563 2910 -404 256 320 80 0 chr5 161625085 161625185 -38004965 - L2 LINE L2 0 3313 3206 342 0 0 0 chr5 161625206 161625244 -38004906 + (TG)n Simple_repeat Simple_repeat 2 39 0 2141 127 0 7 chr5 161626034 161626333 -38003817 - AluSx SINE Alu -15 297 1 521 347 63 52 chr5 161627047 161627472 -38002678 + L2 LINE L2 2607 3031 -282 1831 159 6 16 chr5 161627472 161627786 -38002364 - AluJb SINE Alu -1 311 1 251 228 59 69 chr5 161628108 161628209 -38001941 - L2 LINE L2 -239 3033 2934 188 305 85 0 chr5 161628235 161628294 -38001856 + L2 LINE L2 2986 3049 -223 599 278 78 0 chr5 161629403 161629583 -38000567 - MIR SINE MIR -57 205 12 612 251 118 19 chr5 161629750 161629961 -38000189 + MIR SINE MIR 31 262 0 221 360 57 11 chr5 161630002 161630177 -37999973 + L2 LINE L2 3099 3281 -32 1878 151 0 0 chr5 161630265 161630544 -37999606 + AluSx SINE Alu 1 279 -33 360 0 0 0 chr5 161630546 161630586 -37999564 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 995 130 26 0 chr5 161630721 161630875 -37999275 - L1MA1 LINE L1 0 6302 6145 2809 133 48 42 chr5 161630972 161631244 -37998906 + L1MA8 LINE L1 5709 5978 -313 2210 114 3 0 chr5 161631244 161631543 -37998607 + AluSg SINE Alu 1 300 -10 2809 133 48 42 chr5 161631543 161631848 -37998302 + L1MA8 LINE L1 5978 6290 -1 532 271 45 68 chr5 161632302 161632523 -37997627 - MIR SINE MIR -32 230 15 2376 56 7 10 chr5 161633189 161633492 -37996658 - AluY SINE Alu -9 302 1 1923 160 9 80 chr5 161633595 161634057 -37996093 + L1MB8 LINE L1 5748 6176 -2 283 330 5 91 chr5 161634700 161634897 -37995253 + MIR SINE MIR 2 181 -81 458 338 10 37 chr5 161635249 161635623 -37994527 - L2 LINE L2 -774 2540 2217 248 361 110 14 chr5 161636365 161636584 -37993566 + L2 LINE L2 2546 2785 -529 186 372 44 28 chr5 161636679 161636859 -37993291 + L2 LINE L2 2884 3066 -206 269 68 23 0 chr5 161636939 161636983 -37993167 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 210 143 0 0 chr5 161637066 161637101 -37993049 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 233 254 83 89 chr5 161637378 161637547 -37992603 - L2 LINE L2 -568 2746 2579 217 129 0 0 chr5 161638158 161638189 -37991961 + MIR SINE MIR 71 101 -161 * 589 275 201 20 chr5 161638187 161638739 -37991411 + L2 LINE L2 2645 3309 -4 258 274 44 89 chr5 161638765 161638900 -37991250 + MIR SINE MIR 110 238 -24 328 305 33 26 chr5 161639586 161639737 -37990413 - MER5A DNA MER1_type -2 187 36 428 268 16 24 chr5 161640697 161640824 -37989326 + MIR SINE MIR 56 181 -81 455 198 66 8 chr5 161640829 161640950 -37989200 - MIR SINE MIR -13 249 122 211 171 24 0 chr5 161640951 161640992 -37989158 + L2 LINE L2 3267 3308 -5 271 323 30 34 chr5 161641455 161641602 -37988548 - MIR SINE MIR -68 140 41 234 324 20 20 chr5 161642397 161642499 -37987651 - L3 LINE CR1 -96 1481 1380 27 62 0 0 chr5 161642597 161642645 -37987505 + AT_rich Low_complexity Low_complexity 1 48 0 359 273 53 13 chr5 161642654 161642804 -37987346 - MIR SINE MIR -7 255 100 418 243 33 53 chr5 161642934 161643086 -37987064 + MIR SINE MIR 113 261 -1 1276 163 28 0 chr5 161644210 161644425 -37985725 - MER58A DNA MER1_type -1 223 3 863 182 30 57 chr5 161645344 161645608 -37984542 - Charlie5 DNA MER1_type 0 2624 2368 3326 90 18 0 chr5 161645918 161646363 -37983787 - MLT2A2 LTR ERVL 0 453 1 222 320 0 13 chr5 161646400 161646478 -37983672 - MIR3 SINE MIR -9 199 123 2331 109 0 3 chr5 161646527 161646840 -37983310 - AluSx SINE Alu 0 312 1 182 61 0 30 chr5 161646900 161646933 -37983217 + (CAGAGA)n Simple_repeat Simple_repeat 4 35 0 289 256 26 26 chr5 161646965 161647043 -37983107 + MER5A DNA MER1_type 33 110 -79 228 35 0 0 chr5 161647352 161647381 -37982769 + (TG)n Simple_repeat Simple_repeat 2 30 0 183 80 0 0 chr5 161647485 161647510 -37982640 + (GAAAA)n Simple_repeat Simple_repeat 3 27 0 438 250 182 20 chr5 161647700 161647848 -37982302 - MER5A DNA MER1_type -7 182 11 26418 132 14 21 chr5 161650055 161652232 -37977918 + L1PA8 LINE L1 10 2200 -4287 2343 57 0 3 chr5 161652232 161652545 -37977605 - AluY SINE Alu 0 312 1 26418 132 14 21 chr5 161652545 161656840 -37973310 + L1PA8 LINE L1 2200 6477 -10 623 318 74 0 chr5 161657232 161657474 -37972676 + MIR SINE MIR 2 261 -1 344 311 47 26 chr5 161658150 161658340 -37971810 + MER117 DNA MER1_type 4 197 0 21 36 0 0 chr5 161659878 161659906 -37970244 + AT_rich Low_complexity Low_complexity 1 28 0 876 227 97 4 chr5 161659986 161660224 -37969926 + MIR SINE MIR 2 261 -1 1523 251 81 36 chr5 161661244 161661997 -37968153 - L1ME3A LINE L1 -22 6148 5360 1035 227 152 48 chr5 161662156 161662847 -37967303 - L1ME3A LINE L1 -3093 3053 2291 291 203 0 0 chr5 161662850 161662924 -37967226 + (TA)n Simple_repeat Simple_repeat 1 74 0 22 35 0 0 chr5 161663083 161663112 -37967038 + AT_rich Low_complexity Low_complexity 1 29 0 801 205 153 0 chr5 161663680 161663870 -37966280 + MER20 DNA MER1_type 1 219 0 284 270 0 0 chr5 161665864 161665927 -37964223 + L2 LINE L2 3246 3308 -5 3304 81 25 2 chr5 161666366 161666809 -37963341 - MLT2A2 LTR ERVL 0 453 1 188 285 118 62 chr5 161667472 161667616 -37962534 + L3 LINE CR1 1365 1516 -61 357 355 12 23 chr5 161669172 161669344 -37960806 + MER5A DNA MER1_type 13 182 -7 448 339 86 6 chr5 161670316 161670490 -37959660 - MIR SINE MIR -56 206 19 602 253 13 7 chr5 161670559 161670709 -37959441 - MIR SINE MIR -10 252 102 24 53 0 0 chr5 161671132 161671170 -37958980 + AT_rich Low_complexity Low_complexity 1 38 0 306 252 8 79 chr5 161671324 161671451 -37958699 + L1M4 LINE L1 3073 3190 -2956 2120 104 0 0 chr5 161671835 161672113 -37958037 + AluSx SINE Alu 34 311 -1 205 206 16 16 chr5 161673580 161673643 -37956507 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 1999 128 7 3 chr5 161673681 161673963 -37956187 + AluSq SINE Alu 1 283 -30 207 0 0 0 chr5 161673966 161673989 -37956161 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1259 116 0 0 chr5 161674353 161674517 -37955633 - AluSp SINE Alu -19 294 131 2166 112 20 0 chr5 161675552 161675847 -37954303 + AluSq SINE Alu 1 301 -12 401 309 180 5 chr5 161676898 161677115 -37953035 - MIR SINE MIR -2 260 6 25 31 0 0 chr5 161677131 161677163 -37952987 + AT_rich Low_complexity Low_complexity 1 32 0 254 306 32 0 chr5 161678522 161678584 -37951566 - L3 LINE CR1 -5 1572 1509 393 308 33 0 chr5 161679547 161679667 -37950483 - MIR SINE MIR -92 170 47 27 0 0 0 chr5 161681013 161681040 -37949110 + AT_rich Low_complexity Low_complexity 1 27 0 1041 193 0 11 chr5 161681356 161681532 -37948618 + FAM SINE Alu 1 174 -1 198 0 0 0 chr5 161681837 161681859 -37948291 + (T)n Simple_repeat Simple_repeat 1 22 0 255 237 13 0 chr5 161681859 161681935 -37948215 + L1MC5 LINE L1 7690 7766 -195 215 111 44 22 chr5 161682101 161682146 -37948004 + CT-rich Low_complexity Low_complexity 1 46 0 293 272 71 144 chr5 161682148 161682530 -37947620 + L2 LINE L2 2918 3271 -1 607 271 21 0 chr5 161682945 161683085 -37947065 - MIR SINE MIR -101 161 19 206 263 131 10 chr5 161683216 161683315 -37946835 - L2 LINE L2 -9 3263 3153 423 319 18 71 chr5 161683547 161683663 -37946487 - MIR SINE MIR 0 262 162 623 175 0 0 chr5 161683663 161683777 -37946373 - L1PB4 LINE L1 0 6156 6043 423 319 18 71 chr5 161683777 161683886 -37946264 - MIR SINE MIR -100 162 49 2137 108 3 3 chr5 161684262 161684550 -37945600 + AluSx SINE Alu 1 288 -24 216 0 0 0 chr5 161684554 161684578 -37945572 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 410 355 35 0 chr5 161684659 161684800 -37945350 - MIR SINE MIR -108 154 9 256 355 102 6 chr5 161685071 161685237 -37944913 + L2 LINE L2 2871 3052 -220 401 274 9 26 chr5 161685242 161685355 -37944795 + L2 LINE L2 3203 3313 0 2230 110 3 0 chr5 161685410 161685718 -37944432 + AluSg1 SINE Alu 1 309 0 1626 174 33 0 chr5 161686331 161686601 -37943549 + AluJo SINE Alu 1 279 -33 3577 156 18 10 chr5 161686613 161687293 -37942857 + L1MB2 LINE L1 5480 6164 -7 2338 84 3 0 chr5 161687378 161687674 -37942476 + AluSp SINE Alu 3 299 -14 24 0 0 0 chr5 161687872 161687896 -37942254 + AT_rich Low_complexity Low_complexity 1 24 0 324 256 13 0 chr5 161687961 161688039 -37942111 - L2 LINE L2 -13 3300 3222 1680 167 0 65 chr5 161689127 161689450 -37940700 + AluJb SINE Alu 1 302 -10 426 282 15 22 chr5 161689600 161689758 -37940392 - MIR SINE MIR -66 142 42 188 205 0 0 chr5 161690729 161690768 -37939382 + L3 LINE CR1 1238 1276 -301 2181 114 3 16 chr5 161690771 161691088 -37939062 - AluSq SINE Alu 0 313 1 258 340 93 25 chr5 161691167 161691329 -37938821 + L3 LINE CR1 1403 1575 -2 847 304 16 8 chr5 161692089 161692336 -37937814 - MIR SINE MIR -13 249 1 221 360 74 16 chr5 161693390 161693579 -37936571 + L2 LINE L2 2337 2536 -778 209 237 66 66 chr5 161693699 161693775 -37936375 - L2 LINE L2 0 3272 3197 819 332 93 36 chr5 161694336 161695142 -37935008 - L2 LINE L2 0 3313 2460 185 348 0 43 chr5 161695165 161695234 -37934916 - L2 LINE L2 -3 3269 3204 690 179 28 78 chr5 161695754 161695933 -37934217 - MER20 DNA MER1_type -1 218 49 431 98 15 2 chr5 161695933 161696007 -37934143 + L1MB7 LINE L1 6064 6135 -43 326 154 50 28 chr5 161696849 161697031 -37933119 - LTR10A-int LTR ERV1 -5871 1025 840 263 237 26 0 chr5 161697407 161697483 -37932667 - LTR10A-int LTR ERV1 -7420 365 288 716 237 47 49 chr5 161697509 161697827 -37932323 - LTR10A-int LTR ERV1 -6335 314 7 1546 185 114 43 chr5 161697841 161698263 -37931887 - LTR10A LTR ERV1 -61 548 97 289 333 63 11 chr5 161698693 161698867 -37931283 - MIR SINE MIR -52 210 28 225 276 103 83 chr5 161698908 161699064 -37931086 - MIR SINE MIR -69 193 35 459 252 61 8 chr5 161699090 161699221 -37930929 - MIR SINE MIR 0 262 125 216 67 0 0 chr5 161699221 161699251 -37930899 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 4358 272 100 28 chr5 161699259 161701562 -37928588 + HAL1 LINE L1 12 2480 -27 269 177 13 0 chr5 161701716 161701795 -37928355 + (TA)n Simple_repeat Simple_repeat 1 80 0 299 311 33 0 chr5 161701810 161701900 -37928250 - MIR SINE MIR -133 129 37 180 200 0 0 chr5 161702050 161702090 -37928060 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 229 240 60 0 chr5 161702303 161702353 -37927797 + L2 LINE L2 3209 3261 -11 332 321 0 28 chr5 161703197 161703306 -37926844 - L2 LINE L2 -15 3298 3193 2246 99 7 20 chr5 161703375 161703677 -37926473 + AluSp SINE Alu 1 298 -15 428 304 122 25 chr5 161703746 161703983 -37926167 - MIR SINE MIR 0 262 3 351 296 45 40 chr5 161704061 161704237 -37925913 + MIR SINE MIR 86 262 0 343 301 96 22 chr5 161704615 161704751 -37925399 - MER5B DNA MER1_type -30 148 3 562 304 81 28 chr5 161705622 161705869 -37924281 + MIR SINE MIR 2 261 -1 328 266 115 9 chr5 161705876 161705989 -37924161 + L2 LINE L2 3137 3261 -11 1634 156 24 42 chr5 161706858 161707146 -37923004 - AluJb SINE Alu -29 283 1 263 319 121 33 chr5 161707255 161707562 -37922588 + L1MC/D LINE L1 5304 5637 -2171 866 92 14 64 chr5 161707633 161707732 -37922418 - AluSg/x SINE Alu -15 295 203 7909 79 7 10 chr5 161707732 161708805 -37921345 + MER11C LTR ERVK 1 1069 -2 866 92 14 64 chr5 161708805 161708846 -37921304 - AluSg/x SINE Alu -107 203 162 360 155 0 28 chr5 161708946 161709017 -37921133 + MER11B LTR ERVK 1166 1234 -2 1547 99 0 0 chr5 161709019 161709220 -37920930 - AluSx SINE Alu -110 202 2 307 236 109 36 chr5 161709234 161709344 -37920806 + L1MC/D LINE L1 5732 5849 -1959 309 276 46 0 chr5 161709639 161709726 -37920424 - MIR SINE MIR -96 166 76 241 253 35 69 chr5 161710660 161710747 -37919403 + MIR SINE MIR 55 138 -70 724 265 92 0 chr5 161711587 161711783 -37918367 - MIR SINE MIR -33 229 16 424 279 139 0 chr5 161711784 161711949 -37918201 - MER58C DNA MER1_type 0 215 28 186 43 0 0 chr5 161712082 161712105 -37918045 + (TC)n Simple_repeat Simple_repeat 2 24 0 1838 172 14 0 chr5 161712231 161712521 -37917629 - AluJo SINE Alu -18 294 1 338 249 97 30 chr5 161713207 161713372 -37916778 + MER112 DNA MER1_type 79 254 -6 252 258 52 31 chr5 161713519 161713616 -37916534 - L2 LINE L2 -41 3272 3174 469 354 8 15 chr5 161714762 161714892 -37915258 + L2 LINE L2 3144 3272 0 2577 149 5 5 chr5 161716334 161716762 -37913388 - MER41E LTR ERV1 0 512 85 13922 189 67 55 chr5 161716765 161721563 -37908587 + L1PB1 LINE L1 129 5174 -1693 290 78 0 20 chr5 161721563 161721614 -37908536 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 13922 189 67 55 chr5 161721614 161723321 -37906829 + L1PB1 LINE L1 5174 6859 -8 597 165 10 0 chr5 161723324 161723421 -37906729 - MER41E LTR ERV1 -414 98 1 22 56 0 0 chr5 161723703 161723739 -37906411 + AT_rich Low_complexity Low_complexity 1 36 0 649 192 6 79 chr5 161723915 161724092 -37906058 - LTR49 LTR ERV1 -429 166 3 29 60 0 0 chr5 161724202 161724252 -37905898 + AT_rich Low_complexity Low_complexity 1 50 0 2271 177 84 21 chr5 161724323 161724798 -37905352 - MLT1D LTR MaLR 0 505 1 3548 110 38 11 chr5 161724931 161725485 -37904665 - LTR24B LTR ERV1 -7 569 1 384 223 214 0 chr5 161725855 161725958 -37904192 - MLT1H LTR MaLR -15 534 410 860 227 88 37 chr5 161726020 161726293 -37903857 - MLT1H LTR MaLR -259 290 4 1089 299 58 48 chr5 161726921 161727509 -37902641 - L2 LINE L2 -832 2482 1889 1204 157 129 31 chr5 161727509 161727764 -37902386 + AluJo SINE Alu 29 308 -4 2715 121 29 0 chr5 161727775 161728188 -37901962 - MER61B LTR ERV1 0 425 1 553 262 66 0 chr5 161728329 161728512 -37901638 - L1ME3A LINE L1 -305 5865 5671 312 227 8 15 chr5 161729553 161729685 -37900465 + (TA)n Simple_repeat Simple_repeat 2 132 0 308 235 70 17 chr5 161729705 161729820 -37900330 - L1ME4a LINE L1 -28 6093 5973 667 194 74 6 chr5 161729922 161730097 -37900053 - MER53 DNA DNA -1 188 2 2220 152 24 6 chr5 161730766 161731193 -37898957 - LTR23 LTR ERV1 0 467 1 9847 191 53 58 chr5 161731194 161732599 -37897551 - LTR23-int LTR ERV1 0 5698 4287 2190 106 27 0 chr5 161732599 161732891 -37897259 + AluSp SINE Alu 1 300 -13 9847 191 53 58 chr5 161732891 161734283 -37895867 - LTR23-int LTR ERV1 -1411 4287 2889 1569 101 14 0 chr5 161734283 161734491 -37895659 - AluSg/x SINE Alu -18 292 82 9847 191 53 58 chr5 161734491 161734684 -37895466 - LTR23-int LTR ERV1 -2809 2889 2696 2217 115 0 3 chr5 161734684 161734996 -37895154 - AluY SINE Alu 0 311 1 9847 191 53 58 chr5 161734996 161735892 -37894258 - LTR23-int LTR ERV1 -3002 2696 1015 591 240 95 25 chr5 161735896 161736096 -37894054 - MER34C LTR ERV1 -203 382 169 4295 146 11 16 chr5 161736146 161736853 -37893297 - MER50 LTR ERV1 -30 704 1 809 160 47 0 chr5 161737050 161737200 -37892950 - MER41A-int LTR ERV1 -4798 1533 1377 490 158 39 71 chr5 161737301 161737428 -37892722 - MER41A-int LTR ERV1 -4923 1408 1286 328 254 30 0 chr5 161737430 161737497 -37892653 - tRNA-Glu-GAG tRNA tRNA 0 75 7 392 188 47 12 chr5 161737500 161737585 -37892565 - MER41A-int LTR ERV1 -5121 1210 1123 1980 134 3 33 chr5 161737701 161738007 -37892143 + AluSx SINE Alu 1 297 -15 1257 220 36 30 chr5 161738625 161739002 -37891148 - MER41A-int LTR ERV1 -4519 604 75 4111 76 28 0 chr5 161739002 161739541 -37890609 - MER41A LTR ERV1 0 554 1 1257 220 36 30 chr5 161739541 161739603 -37890547 - MER41A-int LTR ERV1 -5048 75 15 2001 154 75 5 chr5 161739617 161740022 -37890128 - LTR23 LTR ERV1 0 467 1 785 260 30 5 chr5 161740172 161740372 -37889778 - MIR SINE MIR -54 208 4 325 261 39 39 chr5 161740422 161740552 -37889598 + L2 LINE L2 3158 3287 -26 1350 255 52 5 chr5 161740737 161741121 -37889029 - L1ME LINE L1 -507 5655 5254 182 269 58 0 chr5 161741136 161741188 -37888962 - L2 LINE L2 -9 3304 3250 40 73 0 0 chr5 161741282 161741364 -37888786 + AT_rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr5 161741885 161741913 -37888237 + AT_rich Low_complexity Low_complexity 1 28 0 1814 263 113 68 chr5 161741972 161742112 -37888038 - L1ME LINE L1 -930 5216 5084 2014 135 0 13 chr5 161742112 161742423 -37887727 + AluSx SINE Alu 1 307 -5 1814 263 113 68 chr5 161742423 161743674 -37886476 - L1ME LINE L1 -1062 5084 3763 228 135 34 56 chr5 161743686 161743775 -37886375 + (TTTA)n Simple_repeat Simple_repeat 4 90 0 737 321 116 35 chr5 161743806 161744342 -37885808 - L2 LINE L2 -1637 1677 1099 22 35 0 0 chr5 161744673 161744702 -37885448 + AT_rich Low_complexity Low_complexity 1 29 0 334 275 124 22 chr5 161745981 161746159 -37883991 + L2 LINE L2 3112 3307 -6 1415 160 9 112 chr5 161746341 161746672 -37883478 - AluJo SINE Alu -15 297 1 2004 133 3 13 chr5 161746876 161747177 -37882973 - AluSq SINE Alu -15 298 1 507 277 21 7 chr5 161747486 161747627 -37882523 + L1MC4a LINE L1 5475 5617 -2191 1353 209 48 27 chr5 161747732 161748024 -37882126 + AluJo SINE Alu 1 298 -14 743 252 18 9 chr5 161748039 161748257 -37881893 + L1MC4a LINE L1 5671 5890 -1918 4645 192 20 32 chr5 161748258 161748989 -37881161 + L1MB4 LINE L1 4563 5301 -879 2243 122 0 0 chr5 161748989 161749300 -37880850 + AluSq SINE Alu 1 311 -2 4645 192 20 32 chr5 161749300 161749504 -37880646 + L1MB4 LINE L1 5301 5506 -674 1770 172 0 22 chr5 161749504 161749818 -37880332 - AluJo SINE Alu -5 307 1 4645 192 20 32 chr5 161749818 161750529 -37879621 + L1MB4 LINE L1 5506 6180 0 365 253 102 84 chr5 161750548 161750990 -37879160 + L1MC4a LINE L1 6055 6504 -1304 543 194 86 101 chr5 161751140 161751418 -37878732 + L1MC5 LINE L1 6767 7040 -921 1296 175 4 21 chr5 161751422 161751656 -37878494 + AluJo SINE Alu 76 305 -7 1297 208 40 113 chr5 161751670 161752093 -37878057 + L1MC5 LINE L1 7056 7432 -529 2327 92 10 0 chr5 161752093 161752398 -37877752 - AluSg SINE Alu -2 308 1 1297 208 40 113 chr5 161752398 161752522 -37877628 + L1MC5 LINE L1 7432 7563 -398 424 312 109 44 chr5 161753058 161753260 -37876890 - L1MC4a LINE L1 -1972 5836 5602 1592 203 0 36 chr5 161753260 161753566 -37876584 + AluJb SINE Alu 5 299 -13 424 312 109 44 chr5 161753566 161753703 -37876447 - L1MC4a LINE L1 -2206 5602 5475 2491 63 0 0 chr5 161753913 161754215 -37875935 - AluY SINE Alu -9 302 1 469 235 85 61 chr5 161754715 161754962 -37875188 + MER112 DNA MER1_type 4 256 0 194 323 15 15 chr5 161755259 161755324 -37874826 - L2 LINE L2 -35 3237 3173 318 311 105 40 chr5 161755433 161755855 -37874295 - L2 LINE L2 -243 3070 2573 191 345 0 0 chr5 161758054 161758112 -37872038 + L2 LINE L2 3002 3059 -213 321 304 112 0 chr5 161758389 161758514 -37871636 - MIR SINE MIR -6 256 118 337 183 106 58 chr5 161758943 161759047 -37871103 - MIR SINE MIR -70 192 84 604 263 82 52 chr5 161759629 161759861 -37870289 - MIR SINE MIR -3 259 21 27 49 0 0 chr5 161760067 161760108 -37870042 + AT_rich Low_complexity Low_complexity 1 41 0 751 154 0 0 chr5 161760109 161760226 -37869924 - AluJb SINE Alu -195 117 1 22 0 0 0 chr5 161760316 161760338 -37869812 + AT_rich Low_complexity Low_complexity 1 22 0 365 275 25 25 chr5 161761502 161761622 -37868528 + MER94 DNA DNA 6 125 -9 959 129 0 0 chr5 161761660 161761792 -37868358 - FLAM_C SINE Alu -11 132 1 336 284 85 34 chr5 161762374 161762550 -37867600 - MIR SINE MIR -14 248 64 251 285 86 65 chr5 161764173 161764359 -37865791 - L2 LINE L2 -4 3309 3120 1253 301 153 4 chr5 161764797 161765306 -37864844 - MLT1E LTR MaLR 0 593 9 186 287 103 35 chr5 161766122 161766209 -37863941 - MIR SINE MIR -149 113 21 1714 181 42 83 chr5 161766336 161766817 -37863333 + MLT1C LTR MaLR 4 464 -3 639 147 28 0 chr5 161767981 161768090 -37862060 + Tigger5 DNA MER2_type 2212 2323 0 409 289 57 1 chr5 161768250 161768417 -37861733 + MIR SINE MIR 41 215 -47 217 278 215 21 chr5 161768678 161768822 -37861328 + MIR SINE MIR 79 250 -12 359 370 128 0 chr5 161768872 161769075 -37861075 - L3 LINE CR1 -1 1576 1348 405 327 19 0 chr5 161769272 161769428 -37860722 + MIR SINE MIR 56 214 -48 382 269 45 52 chr5 161769609 161769639 -37860511 - MIR SINE MIR -18 244 215 1554 148 116 0 chr5 161769639 161769942 -37860208 - MER44D DNA MER2_type 0 609 2 382 269 45 52 chr5 161769942 161770045 -37860105 - MIR SINE MIR -47 215 112 559 302 78 28 chr5 161770061 161770543 -37859607 - MLT1L LTR MaLR -13 602 106 351 213 0 0 chr5 161770552 161770632 -37859518 + (TG)n Simple_repeat Simple_repeat 2 81 0 262 308 0 51 chr5 161770716 161770794 -37859356 - MIR SINE MIR -178 84 11 219 309 132 0 chr5 161771340 161771408 -37858742 - MIR SINE MIR -84 124 48 412 244 15 59 chr5 161772346 161772481 -37857669 - L2 LINE L2 0 3313 3185 410 266 152 12 chr5 161772473 161772820 -37857330 - L2 LINE L2 -2230 1084 675 * 2445 133 0 3 chr5 161772872 161773234 -37856916 + THE1B LTR MaLR 2 362 -2 9374 119 18 29 chr5 161773239 161774759 -37855391 + THE1B-int LTR MaLR 4 1507 -73 1514 117 45 4 chr5 161774759 161775006 -37855144 - MER41B LTR ERV1 -247 388 132 266 170 0 38 chr5 161775032 161775085 -37855065 - MER41C LTR ERV1 -503 51 1 180 172 202 81 chr5 161775582 161775681 -37854469 + L2 LINE L2 3203 3313 0 701 228 44 0 chr5 161776261 161776419 -37853731 - FAM SINE Alu -10 165 1 332 167 0 0 chr5 161776515 161776575 -37853575 + L1MA9 LINE L1 6066 6125 -187 226 338 40 20 chr5 161777243 161777391 -37852759 - L2 LINE L2 -212 3060 2910 417 292 155 12 chr5 161777568 161777736 -37852414 + MIR SINE MIR 1 192 -70 622 236 65 25 chr5 161778092 161778367 -37851783 - MER113 DNA MER1_type? -75 446 161 295 309 41 0 chr5 161778401 161778498 -37851652 + MIR SINE MIR 151 251 -11 739 172 0 0 chr5 161779350 161779466 -37850684 + FLAM_A SINE Alu 1 116 -17 408 349 41 14 chr5 161779501 161779647 -37850503 - MER91A DNA MER1_type -11 185 36 424 284 27 147 chr5 161779941 161780233 -37849917 + MIR SINE MIR 4 260 -2 1011 174 8 81 chr5 161782266 161782501 -37847649 + MER20 DNA MER1_type 2 219 0 836 191 33 55 chr5 161783216 161783399 -37846751 - MER5A DNA MER1_type -7 182 4 299 317 21 56 chr5 161783506 161783648 -37846502 + MER5B DNA MER1_type 17 153 -25 674 288 105 0 chr5 161783658 161783877 -37846273 - MIR SINE MIR -7 255 14 570 280 42 18 chr5 161784491 161784659 -37845491 - MIR3 SINE MIR -16 192 21 2137 116 0 3 chr5 161784688 161784980 -37845170 + AluSc SINE Alu 1 291 -18 21 0 0 0 chr5 161784980 161785001 -37845149 + AT_rich Low_complexity Low_complexity 1 21 0 2258 98 7 20 chr5 161785220 161785526 -37844624 - AluSx SINE Alu -10 302 1 183 324 138 69 chr5 161786073 161786218 -37843932 - MER5A DNA MER1_type -29 160 6 468 287 13 32 chr5 161786268 161786425 -37843725 - L2 LINE L2 0 3313 3160 2332 86 0 0 chr5 161786425 161786732 -37843418 + AluSc SINE Alu 1 307 0 954 189 13 0 chr5 161786925 161787084 -37843066 + FRAM SINE Alu 1 160 -16 21 0 0 0 chr5 161787084 161787105 -37843045 + AT_rich Low_complexity Low_complexity 1 21 0 301 346 19 0 chr5 161787822 161787929 -37842221 + MER5B DNA MER1_type 65 173 -5 2344 96 0 13 chr5 161788338 161788651 -37841499 + AluSc SINE Alu 1 309 0 198 103 0 0 chr5 161788863 161788892 -37841258 + (GA)n Simple_repeat Simple_repeat 2 30 0 25 31 0 0 chr5 161789661 161789693 -37840457 + AT_rich Low_complexity Low_complexity 1 32 0 2445 54 3 16 chr5 161790251 161790565 -37839585 + AluY SINE Alu 1 310 -1 300 231 0 0 chr5 161790597 161790675 -37839475 + (TA)n Simple_repeat Simple_repeat 1 78 0 560 288 70 28 chr5 161790842 161791057 -37839093 - MIR SINE MIR 0 262 39 258 308 87 0 chr5 161791108 161791212 -37838938 - MIR SINE MIR -3 259 147 1161 140 34 14 chr5 161791523 161791730 -37838420 + MER46A DNA MER2_type 26 236 0 616 185 58 32 chr5 161791814 161792003 -37838147 + L1MA8 LINE L1 6092 6285 -6 235 200 15 0 chr5 161792234 161792299 -37837851 - L1M LINE L1 -805 5359 5294 1014 291 44 21 chr5 161793001 161793552 -37836598 + L1MD2 LINE L1 5350 5793 -377 2056 170 0 3 chr5 161795026 161795381 -37834769 + AluJb SINE Alu 1 354 0 334 289 72 0 chr5 161795422 161795505 -37834645 - MIR SINE MIR -161 101 13 385 308 19 0 chr5 161795523 161795627 -37834523 - L2 LINE L2 -1 3271 3166 1420 242 44 6 chr5 161797080 161797440 -37832710 - MLT1A2 LTR MaLR 0 374 1 1896 207 14 35 chr5 161797440 161797660 -37832490 - MLT1A2-int LTR MaLR 0 1735 1524 1460 164 31 41 chr5 161797660 161797987 -37832163 + AluJb SINE Alu 1 324 0 1896 207 14 35 chr5 161797987 161798197 -37831953 - MLT1A2-int LTR MaLR -211 1524 1311 439 248 0 0 chr5 161798347 161798452 -37831698 - MLT1A2-int LTR MaLR -955 780 676 1739 179 121 21 chr5 161798590 161798792 -37831358 - MLT1A2-int LTR MaLR -718 653 472 2221 128 3 0 chr5 161798792 161799098 -37831052 + AluSp SINE Alu 1 307 -6 1739 179 121 21 chr5 161799098 161799382 -37830768 - MLT1A2-int LTR MaLR -899 472 3 1328 251 30 6 chr5 161799382 161799745 -37830405 - MLT1A2 LTR MaLR -2 372 1 264 59 0 0 chr5 161800892 161800926 -37829224 + (CA)n Simple_repeat Simple_repeat 2 35 0 208 277 0 31 chr5 161801381 161801446 -37828704 + L2 LINE L2 3023 3085 -228 1623 191 3 0 chr5 161801931 161802225 -37827925 - AluJb SINE Alu -17 295 1 2513 93 125 2 chr5 161802267 161802666 -37827484 - LTR7 LTR ERV1 -2 448 1 500 328 8 8 chr5 161803351 161803485 -37826665 + L2 LINE L2 3139 3272 0 356 258 141 8 chr5 161804297 161804425 -37825725 - MIR SINE MIR -16 246 102 203 324 231 0 chr5 161804647 161804755 -37825395 - L2 LINE L2 -1 3271 3139 225 239 14 42 chr5 161805306 161805377 -37824773 + Charlie8 DNA MER1_type 123 191 -2226 1670 158 39 11 chr5 161805944 161806223 -37823927 + AluJo SINE Alu 11 297 -15 477 339 45 11 chr5 161806564 161806741 -37823409 - MER5A DNA MER1_type -3 186 4 219 371 12 84 chr5 161807899 161808066 -37822084 - L2 LINE L2 0 3272 3118 356 255 78 69 chr5 161808498 161808729 -37821421 + L2 LINE L2 2806 3038 -275 364 209 0 12 chr5 161808729 161808815 -37821335 - L1 LINE L1 -846 5300 5216 * 563 214 30 0 chr5 161808808 161808939 -37821211 + L1 LINE L1 3620 3754 -2392 742 228 100 3 chr5 161808956 161809246 -37820904 - L1M4c LINE L1 -3093 3551 3234 * 1131 186 47 61 chr5 161809224 161809643 -37820507 - L1M4c LINE L1 -5320 1222 840 201 74 0 0 chr5 161810015 161810042 -37820108 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 339 328 0 34 chr5 161810131 161810250 -37819900 - L2 LINE L2 -201 3071 2957 2546 147 9 72 chr5 161810631 161811201 -37818949 - L1P LINE L1 -1320 4826 4293 269 161 0 54 chr5 161811209 161811265 -37818885 - MER5B DNA MER1_type -125 53 1 330 236 90 0 chr5 161811324 161811413 -37818737 + MIR SINE MIR 115 211 -51 9695 150 36 28 chr5 161812770 161813279 -37816871 - L1M4c LINE L1 -4431 1953 1450 2047 157 0 0 chr5 161813279 161813579 -37816571 + AluSx SINE Alu 1 300 -12 9695 150 36 28 chr5 161813579 161813783 -37816367 - L1M4c LINE L1 -4934 1450 1249 1668 79 31 18 chr5 161813783 161814010 -37816140 + MER30 DNA MER1_type 1 230 0 9695 150 36 28 chr5 161814010 161815219 -37814931 - L1M4c LINE L1 -5135 1249 13 26 30 0 0 chr5 161815494 161815527 -37814623 + AT_rich Low_complexity Low_complexity 1 33 0 386 280 15 68 chr5 161816049 161816181 -37813969 + MIR3 SINE MIR 38 162 -46 31 44 0 0 chr5 161816227 161816272 -37813878 + AT_rich Low_complexity Low_complexity 1 45 0 514 301 74 0 chr5 161816488 161816651 -37813499 - MER63A DNA MER1_type -19 191 17 1896 164 10 3 chr5 161817064 161817357 -37812793 - AluSx SINE Alu -17 295 1 204 40 0 0 chr5 161819797 161819822 -37810328 + (TG)n Simple_repeat Simple_repeat 2 26 0 660 275 117 68 chr5 161821276 161821528 -37808622 + MLT1K LTR MaLR 100 379 -209 2049 100 4 7 chr5 161821528 161821807 -37808343 + AluSx SINE Alu 24 301 -11 660 275 117 68 chr5 161821807 161821939 -37808211 + MLT1K LTR MaLR 379 503 -85 275 333 36 7 chr5 161822110 161822248 -37807902 + MER103 DNA DNA 2 143 -23 545 239 56 0 chr5 161826331 161826473 -37803677 - MIR SINE MIR -32 230 81 180 321 0 0 chr5 161828485 161828538 -37801612 + L3 LINE CR1 650 702 -875 256 214 57 0 chr5 161828732 161828802 -37801348 - L1MC4 LINE L1 -1355 6687 6614 25 63 0 38 chr5 161828819 161828898 -37801252 + AT_rich Low_complexity Low_complexity 1 76 0 259 144 52 0 chr5 161828926 161829023 -37801127 + (TA)n Simple_repeat Simple_repeat 2 103 0 315 300 0 0 chr5 161829048 161829138 -37801012 + (TA)n Simple_repeat Simple_repeat 1 90 0 22 0 0 0 chr5 161829324 161829346 -37800804 + AT_rich Low_complexity Low_complexity 1 22 0 382 308 81 41 chr5 161829903 161830124 -37800026 + L3 LINE CR1 1328 1557 -20 581 306 151 9 chr5 161830240 161830459 -37799691 + MIR SINE MIR 13 262 0 901 273 81 30 chr5 161830535 161830905 -37799245 + MLT1I LTR MaLR 7 395 -14 436 274 30 12 chr5 161831536 161831704 -37798446 + L1ME4a LINE L1 5947 6117 -4 456 264 8 8 chr5 161832850 161832971 -37797179 + MIR3 SINE MIR 47 167 -41 468 297 45 0 chr5 161833075 161833230 -37796920 + MIR SINE MIR 76 237 -25 2849 7 0 0 chr5 161834260 161834565 -37795585 - AluY SINE Alu -6 305 1 540 298 26 0 chr5 161834939 161835090 -37795060 + MER117 DNA MER1_type 4 158 -39 327 306 139 11 chr5 161835348 161835528 -37794622 + MIR SINE MIR 47 249 -13 648 269 134 47 chr5 161836806 161837208 -37792942 + MLT1K LTR MaLR 150 586 -2 301 278 0 0 chr5 161837298 161837370 -37792780 + MIR SINE MIR 79 150 -112 324 287 111 0 chr5 161837762 161837870 -37792280 + MIR SINE MIR 24 143 -119 750 275 29 29 chr5 161838291 161838535 -37791615 + MIR SINE MIR 16 259 -3 204 240 60 0 chr5 161839482 161839532 -37790618 + MIR SINE MIR 83 135 -127 21 0 0 0 chr5 161839686 161839707 -37790443 + AT_rich Low_complexity Low_complexity 1 21 0 255 330 132 0 chr5 161841076 161841182 -37788968 - L2 LINE L2 -5 3267 3148 430 281 50 38 chr5 161841185 161841345 -37788805 + MER5A DNA MER1_type 4 165 -24 197 315 185 23 chr5 161842185 161842315 -37787835 - MER5B DNA MER1_type -21 157 7 367 211 189 0 chr5 161842476 161842566 -37787584 + L2 LINE L2 3204 3310 -3 538 272 56 17 chr5 161843396 161843576 -37786574 + MIR SINE MIR 64 250 -12 226 192 96 0 chr5 161843739 161843791 -37786359 + L2 LINE L2 3216 3272 0 231 302 206 53 chr5 161844263 161844452 -37785698 + L2 LINE L2 3030 3247 -25 397 273 76 8 chr5 161844835 161844967 -37785183 - MER117 DNA MER1_type -8 189 49 728 249 28 6 chr5 161845951 161846132 -37784018 + MIR SINE MIR 66 250 -12 289 303 15 61 chr5 161847186 161847318 -37782832 + MIR SINE MIR 19 144 -118 459 258 226 0 chr5 161847318 161847473 -37782677 + MIR SINE MIR 2 191 -71 500 265 27 102 chr5 161847961 161848167 -37781983 + MIR SINE MIR 69 260 -2 582 316 51 20 chr5 161848548 161848943 -37781207 + L1ME4a LINE L1 5556 5962 -159 825 259 65 5 chr5 161852057 161852273 -37777877 + MIR SINE MIR 33 261 -1 250 220 68 161 chr5 161852613 161852731 -37777419 - L3 LINE CR1 -9 1568 1462 335 297 59 8 chr5 161852736 161852854 -37777296 + MER117 DNA MER1_type 2 125 -72 * 347 125 0 0 chr5 161852845 161852893 -37777257 - 5S rRNA rRNA -71 50 3 9416 97 2 5 chr5 161852893 161854925 -37775225 + L1PA7 LINE L1 4100 6146 -8 285 98 0 0 chr5 161855233 161855274 -37774876 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 524 278 28 28 chr5 161855294 161855470 -37774680 + MIR SINE MIR 86 261 -1 1739 135 10 51 chr5 161855616 161855943 -37774207 - AluSx SINE Alu 0 315 1 510 46 0 0 chr5 161857914 161857979 -37772171 + (TCCA)n Simple_repeat Simple_repeat 4 68 0 402 358 20 6 chr5 161858130 161858336 -37771814 - L2 LINE L2 -312 3001 2794 2080 75 85 14 chr5 161860583 161860897 -37769253 + L1PA10 LINE L1 5833 6167 0 267 279 9 36 chr5 161861279 161861390 -37768760 + MIR SINE MIR 70 177 -85 260 336 44 8 chr5 161861519 161861665 -37768485 - MIR3 SINE MIR -66 142 2 1534 221 82 25 chr5 161862722 161863171 -37766979 + MER113 DNA MER1_type? 3 477 -44 346 283 26 26 chr5 161863557 161863670 -37766480 + MIR SINE MIR 35 147 -61 267 218 55 0 chr5 161863699 161863754 -37766396 + MIR SINE MIR 131 188 -74 2359 76 7 0 chr5 161863790 161864081 -37766069 + AluSc SINE Alu 1 293 -16 1850 166 27 58 chr5 161864725 161865136 -37765014 + L1MC2 LINE L1 5938 6335 -9 392 363 37 5 chr5 161865312 161865502 -37764648 - MIR SINE MIR -4 258 63 833 277 81 13 chr5 161865802 161866112 -37764038 - LTR33 LTR ERVL -11 510 180 671 281 82 0 chr5 161866217 161866413 -37763737 - LTR33 LTR ERVL -309 212 1 192 241 69 0 chr5 161867973 161868031 -37762119 + MIR SINE MIR 126 187 -75 210 286 57 0 chr5 161869112 161869182 -37760968 - L2 LINE L2 -48 3224 3151 685 316 174 20 chr5 161869269 161869956 -37760194 - L2 LINE L2 0 3313 2514 2394 77 0 3 chr5 161870193 161870493 -37759657 + AluY SINE Alu 1 299 -12 289 265 73 42 chr5 161871047 161871168 -37758982 + MIR SINE MIR 41 166 -42 2139 155 21 13 chr5 161871352 161871727 -37758423 - MLT1B LTR MaLR -2 388 11 328 327 20 33 chr5 161871806 161871956 -37758194 + MIR3 SINE MIR 37 184 -24 239 327 48 10 chr5 161872619 161872723 -37757427 + MIR3 SINE MIR 7 114 -94 348 253 90 12 chr5 161872999 161873165 -37756985 + L1ME4a LINE L1 5942 6120 -1 4120 53 39 18 chr5 161873288 161873800 -37756350 + L1PA8A LINE L1 5607 6129 -2 539 261 115 60 chr5 161874347 161874581 -37755569 + MIR SINE MIR 16 262 0 380 262 58 0 chr5 161875666 161875769 -37754381 - L2 LINE L2 0 3272 3164 475 258 55 23 chr5 161876348 161876509 -37753641 - MIR3 SINE MIR -27 181 19 445 212 82 20 chr5 161877172 161877318 -37752832 + MIR SINE MIR 50 204 -58 1735 106 116 11 chr5 161877762 161878037 -37752113 + AluSg1 SINE Alu 1 304 -5 204 324 128 45 chr5 161879770 161879949 -37750201 + MIR SINE MIR 31 224 -38 468 319 32 42 chr5 161880291 161880507 -37749643 + MIR SINE MIR 49 262 0 299 85 21 0 chr5 161881984 161882031 -37748119 + (TTTC)n Simple_repeat Simple_repeat 2 49 0 288 0 0 0 chr5 161882612 161882644 -37747506 + (CA)n Simple_repeat Simple_repeat 2 33 0 414 0 0 0 chr5 161883055 161883101 -37747049 + (CA)n Simple_repeat Simple_repeat 1 46 0 25 91 0 0 chr5 161884013 161884068 -37746082 + GC_rich Low_complexity Low_complexity 1 55 0 207 100 0 0 chr5 161884280 161884310 -37745840 + (T)n Simple_repeat Simple_repeat 1 30 0 225 0 0 0 chr5 161886223 161886248 -37743902 + (TG)n Simple_repeat Simple_repeat 2 26 0 706 273 45 58 chr5 161886714 161886894 -37743256 + L2 LINE L2 2345 2521 -793 2423 94 0 0 chr5 161886894 161887203 -37742947 - AluSq SINE Alu -4 309 1 706 273 45 58 chr5 161887203 161887333 -37742817 + L2 LINE L2 2521 2651 -663 285 29 0 0 chr5 161887334 161887368 -37742782 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 192 320 90 10 chr5 161887375 161887475 -37742675 - L2 LINE L2 -8 3305 3198 500 281 152 0 chr5 161887515 161887725 -37742425 + L2 LINE L2 3069 3310 -3 1389 294 114 26 chr5 161887999 161888383 -37741767 - L2 LINE L2 -1640 1674 1325 4639 55 5 14 chr5 161888383 161888942 -37741208 + MER41A LTR ERV1 1 554 0 1389 294 114 26 chr5 161888942 161889204 -37740946 - L2 LINE L2 -1989 1325 971 26 30 0 0 chr5 161889280 161889313 -37740837 + AT_rich Low_complexity Low_complexity 1 33 0 2270 91 0 3 chr5 161890141 161890437 -37739713 + AluY SINE Alu 1 295 -16 1036 176 55 83 chr5 161890736 161891025 -37739125 + MLT1D LTR MaLR 23 303 -202 3259 311 84 39 chr5 161891064 161891262 -37738888 + HERV16 LTR ERVL 1718 1906 -3858 2037 170 70 122 chr5 161891262 161891908 -37738242 + LTR9 LTR ERV1 1 612 0 3259 311 84 39 chr5 161891908 161895103 -37735047 + HERV16 LTR ERVL 1906 5323 -441 1666 203 16 13 chr5 161895229 161895540 -37734610 + AluJo SINE Alu 1 312 0 2121 111 7 0 chr5 161895623 161895912 -37734238 - AluSx SINE Alu -21 291 1 855 295 30 33 chr5 161895959 161896291 -37733859 + LTR16A LTR ERVL 120 450 0 437 313 84 6 chr5 161896325 161896504 -37733646 + Charlie8 DNA MER1_type 66 258 -2159 1759 189 38 54 chr5 161898052 161898423 -37731727 - MLT1A1 LTR MaLR 0 365 1 859 41 0 0 chr5 161899045 161899143 -37731007 - L1PA5 LINE L1 -8 6146 6049 282 303 96 22 chr5 161899661 161899788 -37730362 + MIR SINE MIR 30 160 -48 270 340 10 0 chr5 161900077 161900180 -37729970 + L2 LINE L2 2231 2334 -980 1217 277 63 39 chr5 161900202 161900617 -37729533 + LTR16A LTR ERVL 16 440 -10 217 224 133 31 chr5 161900742 161900840 -37729310 + L2 LINE L2 2929 3036 -236 816 325 58 36 chr5 161900858 161901353 -37728797 + L2 LINE L2 2742 3247 -25 290 138 17 0 chr5 161901381 161901439 -37728711 + (CATA)n Simple_repeat Simple_repeat 2 60 0 253 223 165 33 chr5 161902340 161902461 -37727689 - MIR3 SINE MIR -42 166 30 186 267 173 7 chr5 161902687 161902825 -37727325 + MIR SINE MIR 38 197 -65 21 0 0 0 chr5 161903408 161903429 -37726721 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr5 161903914 161903938 -37726212 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 21 0 0 0 chr5 161904149 161904170 -37725980 + AT_rich Low_complexity Low_complexity 1 21 0 340 338 55 23 chr5 161904314 161904533 -37725617 + MIR SINE MIR 26 251 -11 487 266 155 19 chr5 161904687 161904894 -37725256 - MIR SINE MIR -27 235 1 303 291 13 0 chr5 161904933 161905012 -37725138 + MIR SINE MIR 170 249 -13 738 126 63 14 chr5 161905075 161905218 -37724932 - L1MB7 LINE L1 0 6184 6035 1398 186 0 12 chr5 161905266 161905524 -37724626 + L1MC/D LINE L1 5501 5755 -487 688 260 20 5 chr5 161905522 161905718 -37724432 + L1MD3 LINE L1 7787 7985 -10 * 705 224 13 7 chr5 161906279 161906431 -37723719 - MIR SINE MIR -49 213 61 24 77 0 0 chr5 161906481 161906533 -37723617 + AT_rich Low_complexity Low_complexity 1 52 0 1613 273 73 68 chr5 161906744 161907875 -37722275 + L1MEd LINE L1 143 1321 -4941 2997 3 0 0 chr5 161907875 161908193 -37721957 - AluYb8 SINE Alu 0 318 1 1613 273 73 68 chr5 161908193 161908261 -37721889 + L1MEd LINE L1 1321 1387 -4875 344 200 47 108 chr5 161908554 161908709 -37721441 - MLT1J LTR MaLR -317 163 26 272 298 58 0 chr5 161909243 161909347 -37720803 + L2 LINE L2 3204 3313 0 474 278 116 33 chr5 161909411 161909652 -37720498 - MIR SINE MIR 0 262 2 351 198 198 9 chr5 161910167 161910283 -37719867 - MIR SINE MIR -12 250 113 518 279 112 60 chr5 161910306 161910831 -37719319 + LTR33A LTR ERVL 21 521 -2 280 229 16 0 chr5 161910838 161910899 -37719251 - MIR SINE MIR -154 108 47 2183 103 3 0 chr5 161911015 161911333 -37718817 - AluSp SINE Alu 0 319 1 501 309 17 17 chr5 161911432 161911607 -37718543 + MIR SINE MIR 14 188 -74 1830 229 15 37 chr5 161911665 161911866 -37718284 - LTR40c LTR ERVL 0 465 261 1817 201 96 6 chr5 161911866 161912229 -37717921 + MSTD LTR MaLR 1 396 0 1830 229 15 37 chr5 161912229 161912485 -37717665 - LTR40c LTR ERVL -204 261 18 246 316 18 71 chr5 161912558 161912727 -37717423 - MIR3 SINE MIR -57 151 15 2024 137 60 41 chr5 161913047 161913413 -37716737 - THE1C LTR MaLR 0 375 3 255 294 105 1 chr5 161913436 161913531 -37716619 - MIR3 SINE MIR -47 161 63 282 258 11 54 chr5 161913762 161913855 -37716295 - L2 LINE L2 0 3313 3225 208 296 42 0 chr5 161913882 161913953 -37716197 - L2 LINE L2 0 3313 3240 294 276 133 0 chr5 161914155 161914253 -37715897 + MIR SINE MIR 119 229 -33 201 39 0 0 chr5 161914323 161914349 -37715801 + (TCTG)n Simple_repeat Simple_repeat 4 29 0 189 311 175 19 chr5 161915551 161915654 -37714496 + MIR SINE MIR 11 129 -133 365 266 52 32 chr5 161915702 161915856 -37714294 - L1ME4a LINE L1 -253 5868 5712 367 290 127 25 chr5 161916007 161916224 -37713926 + MIR SINE MIR 1 227 -35 1628 152 18 0 chr5 161916225 161916508 -37713642 + L1MB4 LINE L1 5705 5992 -182 494 191 28 28 chr5 161916511 161916652 -37713498 + L1MB4 LINE L1 6039 6179 -1 194 205 26 0 chr5 161916653 161916692 -37713458 + L2 LINE L2 3262 3301 -12 353 267 11 11 chr5 161916703 161916793 -37713357 + MIR3 SINE MIR 106 195 -13 1065 209 31 40 chr5 161917843 161918068 -37712082 + MER58A DNA MER1_type 1 223 -1 1229 187 10 0 chr5 161918829 161919038 -37711112 + AluJb SINE Alu 84 294 -18 2287 118 0 0 chr5 161919044 161919357 -37710793 + AluSq SINE Alu 1 313 0 417 287 153 8 chr5 161919675 161919884 -37710266 + MIR SINE MIR 16 251 -11 758 224 73 36 chr5 161920090 161920282 -37709868 + L1PA16 LINE L1 5968 6166 0 10919 211 50 52 chr5 161920862 161923602 -37706548 + L1MC1 LINE L1 27 2772 -3841 1539 215 10 13 chr5 161923602 161923913 -37706237 + AluJo SINE Alu 1 310 -2 10919 211 50 52 chr5 161923913 161924222 -37705928 + L1MC1 LINE L1 2772 3080 -3533 1773 86 0 0 chr5 161924222 161924442 -37705708 + AluSq SINE Alu 1 220 -93 10919 211 50 52 chr5 161924442 161924895 -37705255 + L1MC1 LINE L1 3080 3533 -3080 2255 61 0 47 chr5 161924895 161925223 -37704927 + AluY SINE Alu 1 314 0 10919 211 50 52 chr5 161925223 161925569 -37704581 + L1MC1 LINE L1 3533 3878 -2735 11732 29 0 0 chr5 161925569 161927722 -37702428 + L1PA4 LINE L1 4000 6152 -3 10919 211 50 52 chr5 161927722 161928248 -37701902 + L1MC1 LINE L1 3878 4404 -2209 6495 75 65 22 chr5 161928248 161929417 -37700733 - L1PA13 LINE L1 -1 6162 4970 10919 211 50 52 chr5 161929417 161930643 -37699507 + L1MC1 LINE L1 4404 5631 -982 2323 107 0 0 chr5 161930643 161930942 -37699208 + AluSx SINE Alu 1 299 -13 10919 211 50 52 chr5 161930942 161931790 -37698360 + L1MC1 LINE L1 5631 6433 -180 2096 130 27 0 chr5 161931790 161932090 -37698060 - AluSx SINE Alu -4 308 1 10919 211 50 52 chr5 161932090 161932253 -37697897 + L1MC1 LINE L1 6433 6595 -18 1516 172 107 3 chr5 161932284 161932610 -37697540 - MLT1A1 LTR MaLR 0 365 6 282 95 0 0 chr5 161932681 161932723 -37697427 + (CA)n Simple_repeat Simple_repeat 1 42 0 2544 56 0 0 chr5 161932883 161933187 -37696963 - AluY SINE Alu -7 304 1 1410 190 69 0 chr5 161933629 161933903 -37696247 - AluJb SINE Alu -19 293 1 370 333 47 16 chr5 161934053 161934182 -37695968 - MIR3 SINE MIR -36 172 40 2247 102 0 3 chr5 161935553 161935847 -37694303 - AluSx SINE Alu -19 293 1 314 336 145 11 chr5 161935892 161936154 -37693996 + L3 LINE CR1 337 633 -944 383 316 17 17 chr5 161936233 161936350 -37693800 + MIR SINE MIR 20 136 -126 627 313 111 60 chr5 161936417 161937001 -37693149 + L3 LINE CR1 674 1287 -290 380 336 26 0 chr5 161937047 161937163 -37692987 - MIR SINE MIR -112 150 32 401 261 97 15 chr5 161937175 161937309 -37692841 + MLT1I LTR MaLR 11 155 -254 480 211 23 45 chr5 161937396 161937529 -37692621 + MLT1I LTR MaLR 280 409 0 662 293 72 5 chr5 161937570 161937778 -37692372 + L3 LINE CR1 1282 1503 -74 259 193 181 24 chr5 161937804 161937887 -37692263 - L2 LINE L2 -14 3258 3163 25 31 0 0 chr5 161939848 161939880 -37690270 + GC_rich Low_complexity Low_complexity 1 32 0 270 0 0 0 chr5 161941047 161941077 -37689073 + (CA)n Simple_repeat Simple_repeat 1 30 0 254 348 89 0 chr5 161941478 161941590 -37688560 - L2 LINE L2 0 3272 3151 351 282 107 0 chr5 161941699 161941802 -37688348 + L2 LINE L2 3199 3312 -1 359 231 0 0 chr5 161941834 161941912 -37688238 - MIR SINE MIR -10 252 175 1942 129 0 11 chr5 161942135 161942415 -37687735 + AluSx SINE Alu 1 277 -35 189 0 0 0 chr5 161942421 161942442 -37687708 + (CAA)n Simple_repeat Simple_repeat 2 22 0 268 310 39 23 chr5 161942615 161942708 -37687442 - MIR SINE MIR -15 247 150 1583 182 3 26 chr5 161942708 161943010 -37687140 - AluJb SINE Alu -17 295 1 268 310 39 23 chr5 161943010 161943045 -37687105 - MIR SINE MIR -112 150 117 404 341 49 24 chr5 161943511 161943716 -37686434 - MIR SINE MIR -35 227 18 2270 93 0 3 chr5 161944361 161944652 -37685498 - AluSx SINE Alu -18 294 5 279 324 0 0 chr5 161944921 161944992 -37685158 + MIR SINE MIR 185 255 -7 352 280 77 0 chr5 161945373 161945541 -37684609 + L1ME4a LINE L1 5939 6119 -2 21 0 0 0 chr5 161946355 161946376 -37683774 + AT_rich Low_complexity Low_complexity 1 21 0 231 114 0 0 chr5 161946435 161946470 -37683680 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 339 365 50 1 chr5 161947625 161947766 -37682384 + MIR SINE MIR 4 152 -64 30 69 0 0 chr5 161948114 161948172 -37681978 + AT_rich Low_complexity Low_complexity 1 58 0 34 55 0 0 chr5 161948622 161948677 -37681473 + AT_rich Low_complexity Low_complexity 1 55 0 278 265 0 71 chr5 161949653 161949751 -37680399 - L2 LINE L2 0 3313 3223 699 255 22 16 chr5 161950032 161950216 -37679934 + MER58B DNA MER1_type 157 341 0 2401 91 3 3 chr5 161950362 161950669 -37679481 - AluSx SINE Alu -5 307 1 205 273 0 0 chr5 161950758 161950802 -37679348 - MER5A DNA MER1_type -139 50 7 1168 162 32 19 chr5 161951373 161951589 -37678561 + AluJo SINE Alu 84 302 -10 753 227 63 24 chr5 161952604 161952811 -37677339 + MIR SINE MIR 36 250 -12 201 318 45 45 chr5 161953310 161953420 -37676730 - MIR SINE MIR -62 146 37 202 143 0 24 chr5 161954296 161954338 -37675812 + (TA)n Simple_repeat Simple_repeat 1 41 0 1859 164 23 3 chr5 161954400 161954705 -37675445 + AluJo SINE Alu 1 311 -1 2031 199 60 7 chr5 161955693 161956125 -37674025 - LTR32 LTR ERVL 0 471 17 462 296 130 18 chr5 161956153 161956322 -37673828 - MIR SINE MIR -69 193 6 1341 207 80 18 chr5 161956396 161956797 -37673353 - LTR37A LTR ERV1 0 426 1 256 234 0 0 chr5 161957784 161957848 -37672302 + MER92C LTR ERV1 491 554 0 2201 167 59 66 chr5 161958682 161959258 -37670892 + L1MB7 LINE L1 5603 6174 -10 2017 119 39 42 chr5 161959465 161959777 -37670373 + AluSx SINE Alu 1 311 -1 2095 146 3 0 chr5 161959960 161960255 -37669895 + AluSq SINE Alu 1 296 -17 296 284 0 0 chr5 161960324 161960391 -37669759 + MIR3 SINE MIR 94 160 -48 409 265 66 0 chr5 161960403 161960569 -37669581 - MER113 DNA MER1_type? -343 178 2 616 283 68 40 chr5 161961001 161961153 -37668997 - MIR SINE MIR -3 259 94 537 228 26 9 chr5 161961153 161961338 -37668812 + FLAM_A SINE Alu 1 187 0 616 283 68 40 chr5 161961338 161961434 -37668716 - MIR SINE MIR -168 94 2 447 274 9 0 chr5 161962564 161962677 -37667473 + MER81 DNA DNA 1 114 0 221 313 50 40 chr5 161962736 161962835 -37667315 + MER5B DNA MER1_type 72 171 -7 21 82 0 0 chr5 161962910 161962959 -37667191 + AT_rich Low_complexity Low_complexity 1 49 0 472 330 106 12 chr5 161963285 161963606 -37666544 - L1ME4a LINE L1 -5 6116 5766 260 241 74 9 chr5 161963939 161964047 -37666103 - L1ME4a LINE L1 -206 5915 5801 515 222 118 52 chr5 161964353 161964506 -37665644 + MIR SINE MIR 68 230 -32 673 329 12 4 chr5 161964675 161964915 -37665235 + MIR SINE MIR 8 249 -13 372 343 35 23 chr5 161965184 161965356 -37664794 + MIR3 SINE MIR 20 193 -15 2297 76 0 7 chr5 161965399 161965689 -37664461 + AluSg1 SINE Alu 1 288 -21 671 330 52 4 chr5 161966234 161966467 -37663683 - MIR SINE MIR -1 261 18 2251 107 0 13 chr5 161967820 161968129 -37662021 - AluSx SINE Alu -7 305 1 247 330 20 15 chr5 161968186 161968389 -37661761 - L1ME4a LINE L1 -294 5827 5624 721 249 57 11 chr5 161968859 161969036 -37661114 + L2 LINE L2 1843 2027 -1287 2037 108 0 28 chr5 161969063 161969370 -37660780 + AluSx SINE Alu 8 306 0 1024 287 100 0 chr5 161969373 161969774 -37660376 - LTR33A LTR ERVL -28 495 55 2196 138 0 3 chr5 161969867 161970178 -37659972 - AluSx SINE Alu -2 310 1 446 264 24 8 chr5 161970185 161970310 -37659840 + L2 LINE L2 2043 2169 -1145 1268 194 43 47 chr5 161970490 161970769 -37659381 + AluJo SINE Alu 1 278 -34 533 282 17 17 chr5 161970796 161970970 -37659180 + LTR16A LTR ERVL 54 227 -223 199 195 0 0 chr5 161971051 161971092 -37659058 + L2 LINE L2 3273 3313 0 1920 149 33 3 chr5 161971158 161971460 -37658690 - AluSx SINE Alu -1 311 1 276 261 14 0 chr5 161971526 161971595 -37658555 + MIR SINE MIR 180 249 -13 232 230 18 80 chr5 161972075 161972188 -37657962 - L2 LINE L2 -55 3258 3153 1496 180 79 4 chr5 161972350 161972628 -37657522 - AluJo SINE Alu -11 301 3 253 249 16 57 chr5 161973261 161973410 -37656740 - L1ME4a LINE L1 -161 5960 5824 2251 136 0 0 chr5 161973410 161973720 -37656430 + AluSq SINE Alu 1 310 -3 253 249 16 57 chr5 161973720 161973883 -37656267 - L1ME4a LINE L1 -297 5824 5656 642 310 35 26 chr5 161973908 161974140 -37656010 - MIR SINE MIR 0 262 29 424 314 55 43 chr5 161974900 161975155 -37654995 - MLT1J2 LTR MaLR -21 429 172 303 290 11 0 chr5 161975168 161975261 -37654889 - MLT1J1 LTR MaLR -348 98 5 276 100 0 0 chr5 161975812 161975852 -37654298 + (TG)n Simple_repeat Simple_repeat 2 41 0 533 236 40 20 chr5 161976567 161976715 -37653435 + MIR SINE MIR 84 234 -28 2425 66 7 0 chr5 161976783 161977077 -37653073 + AluY SINE Alu 5 296 -15 182 171 24 0 chr5 161977100 161977141 -37653009 + (CA)n Simple_repeat Simple_repeat 2 43 0 359 314 61 58 chr5 161977167 161977460 -37652690 - L1MC4a LINE L1 -1801 6007 5714 208 337 119 0 chr5 161977569 161977670 -37652480 - MIR SINE MIR -64 144 32 2187 96 7 0 chr5 161977686 161977987 -37652163 + AluSp SINE Alu 1 303 0 210 271 0 17 chr5 161978053 161978112 -37652038 - MIR SINE MIR -136 126 69 546 127 64 9 chr5 161978699 161978809 -37651341 - L1MB7 LINE L1 -1 6183 6068 1256 243 29 34 chr5 161978837 161979238 -37650912 - MER39 LTR ERV1 0 666 275 554 163 67 74 chr5 161979318 161979453 -37650697 - L1MB8 LINE L1 -101 6077 5944 1985 135 7 0 chr5 161979462 161979751 -37650399 - AluSx SINE Alu -11 301 11 509 96 78 17 chr5 161979754 161979869 -37650281 + CT-rich Low_complexity Low_complexity 4 125 0 3270 171 77 23 chr5 161979955 161980690 -37649460 - L1MB3 LINE L1 -221 5962 5162 1998 129 3 0 chr5 161980690 161980977 -37649173 - AluSx SINE Alu -13 299 12 3270 171 77 23 chr5 161980977 161981254 -37648896 - L1MB3 LINE L1 -1021 5162 4902 502 356 59 22 chr5 161981283 161981606 -37648544 - LTR16C LTR ERVL 0 491 157 2306 141 141 5 chr5 161981706 161982083 -37648067 + MSTA LTR MaLR 1 428 0 21 57 0 0 chr5 161982533 161982568 -37647582 + AT_rich Low_complexity Low_complexity 1 35 0 2083 53 0 0 chr5 161982568 161982813 -37647337 - AluY SINE Alu -28 283 39 1154 288 97 46 chr5 161982813 161983518 -37646632 - L2 LINE L2 -10 3303 2563 2185 124 0 0 chr5 161983610 161983909 -37646241 - AluSx SINE Alu -7 305 7 2169 131 0 13 chr5 161984075 161984388 -37645762 + AluSx SINE Alu 1 309 -3 278 288 55 0 chr5 161985414 161985487 -37644663 - L2 LINE L2 -2 3270 3194 225 360 58 14 chr5 161985528 161985667 -37644483 - MIR SINE MIR 0 262 118 2039 100 65 0 chr5 161985817 161986108 -37644042 + AluSx SINE Alu 3 312 0 2386 103 0 0 chr5 161986123 161986435 -37643715 + AluSx SINE Alu 1 312 0 252 0 0 0 chr5 161986916 161986944 -37643206 + (TC)n Simple_repeat Simple_repeat 2 29 0 317 235 0 82 chr5 161986946 161987044 -37643106 - L1MC4 LINE L1 -1339 6703 6614 2023 102 15 0 chr5 161987307 161987571 -37642579 - AluSp SINE Alu -45 268 1 250 329 57 44 chr5 161987906 161988134 -37642016 + L2 LINE L2 3082 3312 -1 379 329 87 7 chr5 161988712 161988861 -37641289 - LTR33 LTR ERVL -337 184 24 264 322 11 0 chr5 161988967 161989057 -37641093 - MIR SINE MIR -132 130 40 257 283 119 19 chr5 161989610 161989769 -37640381 - L1ME4a LINE L1 -16 6105 5931 1708 161 4 0 chr5 161989774 161990028 -37640122 + AluJb SINE Alu 33 287 -25 543 259 152 6 chr5 161990221 161990379 -37639771 - MER5A DNA MER1_type -6 183 3 22 35 0 0 chr5 161991184 161991213 -37638937 + AT_rich Low_complexity Low_complexity 1 29 0 285 98 0 0 chr5 161991685 161991726 -37638424 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 306 73 0 0 chr5 161992031 161992072 -37638078 + (TG)n Simple_repeat Simple_repeat 2 42 0 2166 122 0 10 chr5 161992148 161992451 -37637699 - AluSx SINE Alu -10 302 3 1110 204 0 24 chr5 161992458 161992669 -37637481 - AluJb SINE Alu -21 291 86 1636 190 59 0 chr5 161993274 161993444 -37636706 - AluJo SINE Alu -5 307 112 183 42 0 0 chr5 161993444 161993468 -37636682 + (TTTTA)n Simple_repeat Simple_repeat 5 28 0 1636 190 59 0 chr5 161993468 161993587 -37636563 - AluJo SINE Alu -200 112 1 337 250 96 29 chr5 161993935 161994071 -37636079 - MIR SINE MIR -67 195 51 254 339 108 16 chr5 161994899 161995085 -37635065 + MIR SINE MIR 11 213 -49 22 0 0 0 chr5 161995285 161995307 -37634843 + AT_rich Low_complexity Low_complexity 1 22 0 1760 61 5 0 chr5 161995433 161995645 -37634505 - AluY SINE Alu -17 294 82 252 226 191 0 chr5 161995694 161995778 -37634372 - MER103 DNA DNA 0 166 67 2339 110 0 0 chr5 161996465 161996773 -37633377 - AluSq SINE Alu -5 308 1 2371 109 3 0 chr5 161997085 161997397 -37632753 - AluSp SINE Alu 0 313 1 228 163 0 0 chr5 161997467 161997510 -37632640 + (TG)n Simple_repeat Simple_repeat 2 44 0 1874 95 19 23 chr5 161997618 161997880 -37632270 + AluSc SINE Alu 27 287 -22 410 336 36 36 chr5 161998483 161998703 -37631447 - MIR SINE MIR -12 250 31 245 279 23 0 chr5 161998827 161998913 -37631237 + MIR SINE MIR 129 216 -46 409 136 0 0 chr5 161999799 161999881 -37630269 - Alu SINE Alu 0 312 235 2045 183 51 75 chr5 161999995 162000198 -37629952 - L1MD2 LINE L1 -320 6039 5833 1942 141 20 0 chr5 162000198 162000371 -37629779 - AluSq SINE Alu -9 304 121 225 0 0 0 chr5 162000371 162000396 -37629754 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1942 141 20 0 chr5 162000396 162000520 -37629630 - AluSq SINE Alu -192 121 1 2045 183 51 75 chr5 162000520 162000798 -37629352 - L1MD2 LINE L1 -526 5833 5550 1762 176 0 16 chr5 162000798 162001104 -37629046 + AluJb SINE Alu 1 301 -11 2045 183 51 75 chr5 162001104 162001255 -37628895 - L1MD2 LINE L1 -809 5550 5397 2156 107 7 13 chr5 162001255 162001555 -37628595 - AluSq SINE Alu -15 298 1 2045 183 51 75 chr5 162001555 162001985 -37628165 - L1MD2 LINE L1 -962 5397 4842 2344 67 27 3 chr5 162002103 162002401 -37627749 - AluY SINE Alu -6 305 1 369 259 119 7 chr5 162002724 162002867 -37627283 + MIR SINE MIR 104 262 0 204 333 83 17 chr5 162003168 162003288 -37626862 + MIR SINE MIR 58 185 -77 22 35 0 0 chr5 162003413 162003442 -37626708 + AT_rich Low_complexity Low_complexity 1 29 0 776 250 88 7 chr5 162003812 162004108 -37626042 + HAL1b LINE L1 1026 1345 -3 603 239 75 20 chr5 162004080 162004281 -37625869 - L1MD3 LINE L1 0 7995 7784 * 270 266 33 22 chr5 162004461 162004595 -37625555 - MER63 DNA MER1_type -1 1059 682 435 310 39 16 chr5 162005529 162005658 -37624492 + MIR SINE MIR 8 139 -123 571 293 80 44 chr5 162005689 162005914 -37624236 - MIR SINE MIR -17 245 13 258 154 35 83 chr5 162005980 162006097 -37624053 + (TTATA)n Simple_repeat Simple_repeat 2 110 -52 2054 125 0 3 chr5 162006097 162006386 -37623764 - AluSx SINE Alu -24 288 1 258 154 35 83 chr5 162006386 162006437 -37623713 + (TTATA)n Simple_repeat Simple_repeat 110 162 0 190 294 43 54 chr5 162006444 162006536 -37623614 + MIR SINE MIR 19 109 -99 2086 109 3 7 chr5 162006553 162006838 -37623312 - AluSq SINE Alu -25 288 5 1549 134 106 34 chr5 162006841 162007133 -37623017 - AluSq SINE Alu 0 313 1 206 200 0 0 chr5 162007166 162007206 -37622944 + L2 LINE L2 3265 3304 -9 201 121 0 0 chr5 162007206 162007239 -37622911 + (A)n Simple_repeat Simple_repeat 1 33 0 437 288 98 46 chr5 162007767 162007989 -37622161 - MIR SINE MIR -13 249 19 25 51 0 0 chr5 162008376 162008415 -37621735 + AT_rich Low_complexity Low_complexity 1 39 0 195 217 0 0 chr5 162009004 162009064 -37621086 + A-rich Low_complexity Low_complexity 1 60 0 291 267 67 0 chr5 162009218 162009308 -37620842 - L2 LINE L2 -32 3240 3145 2312 81 3 0 chr5 162009338 162009653 -37620497 - AluSp SINE Alu 0 316 1 2220 109 0 16 chr5 162009781 162010093 -37620057 + AluSg SINE Alu 1 307 -3 4817 165 62 46 chr5 162010283 162011338 -37618812 + MER11C LTR ERVK 1 1071 0 310 224 176 57 chr5 162012065 162012275 -37617875 - LTR37B LTR ERV1 -24 444 210 930 205 13 0 chr5 162012622 162012778 -37617372 + FRAM SINE Alu 1 158 -8 2058 104 54 0 chr5 162012780 162013059 -37617091 + AluSp SINE Alu 1 294 -19 1858 148 3 20 chr5 162014208 162014512 -37615638 - AluJo SINE Alu -13 299 1 1273 210 33 27 chr5 162014530 162014830 -37615320 - AluJo SINE Alu -10 302 1 195 231 0 0 chr5 162014916 162014955 -37615195 + L2 LINE L2 3178 3216 -97 1838 125 10 37 chr5 162015355 162015650 -37614500 + AluSx SINE Alu 5 291 -21 21 36 0 0 chr5 162015763 162015791 -37614359 + AT_rich Low_complexity Low_complexity 1 28 0 655 174 0 0 chr5 162017013 162017122 -37613028 - FLAM_A SINE Alu -2 140 32 191 308 55 11 chr5 162017244 162017335 -37612815 - L3 LINE CR1 -1 1576 1482 282 29 0 0 chr5 162017676 162017711 -37612439 + (TG)n Simple_repeat Simple_repeat 2 36 0 26 0 0 0 chr5 162017746 162017772 -37612378 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr5 162018206 162018230 -37611920 + AT_rich Low_complexity Low_complexity 1 24 0 2313 113 0 0 chr5 162019425 162019726 -37610424 + AluSx SINE Alu 1 301 -11 538 246 31 31 chr5 162070091 162070282 -37559868 + LTR19C LTR ERV1 589 779 0 330 282 13 0 chr5 162070282 162070360 -37559790 - MIR SINE MIR -116 146 68 666 275 65 15 chr5 162070487 162070687 -37559463 - MIR SINE MIR -7 255 46 443 301 20 20 chr5 162071146 162071299 -37558851 + MIR SINE MIR 104 256 -6 297 0 0 0 chr5 162071797 162071830 -37558320 + (CA)n Simple_repeat Simple_repeat 2 34 0 1126 241 95 6 chr5 162071873 162072222 -37557928 + MLT1B LTR MaLR 1 380 -10 1850 115 0 84 chr5 162072310 162072632 -37557518 - AluY SINE Alu -15 296 2 330 285 122 52 chr5 162073156 162073643 -37556507 - L2 LINE L2 -64 3249 2687 996 190 15 20 chr5 162073651 162073851 -37556299 + MER58A DNA MER1_type 14 212 -12 640 241 27 88 chr5 162073865 162074193 -37555957 - L2 LINE L2 -685 2629 2322 306 314 24 32 chr5 162074334 162074458 -37555692 + L2 LINE L2 3150 3272 0 284 331 40 33 chr5 162074455 162074606 -37555544 - MIR SINE MIR 0 262 111 * 449 286 23 46 chr5 162074633 162074850 -37555300 - MER102b DNA MER1_type -21 320 109 271 250 83 19 chr5 162075518 162075626 -37554524 - L2 LINE L2 -16 3297 3183 506 301 100 22 chr5 162075857 162076086 -37554064 - MIR SINE MIR -10 252 6 270 342 25 0 chr5 162076400 162076479 -37553671 - L2 LINE L2 -670 2644 2564 1253 98 0 131 chr5 162076495 162076740 -37553410 + MER4B LTR ERV1 396 608 -2 843 187 18 24 chr5 162076876 162077042 -37553108 - FAM SINE Alu -9 40 1 463 287 74 65 chr5 162078746 162078976 -37551174 + MIR SINE MIR 25 256 -6 570 248 0 15 chr5 162079851 162079984 -37550166 - FLAM_A SINE Alu -2 131 1 205 237 13 13 chr5 162080460 162080536 -37549614 + A-rich Low_complexity Low_complexity 5 80 0 475 258 229 22 chr5 162080656 162080923 -37549227 - L2 LINE L2 -3 3310 2989 1905 301 94 32 chr5 162081050 162082128 -37548022 - L2 LINE L2 -610 2704 1561 763 284 38 13 chr5 162082510 162082749 -37547401 - MIR SINE MIR -5 257 13 431 288 78 13 chr5 162082754 162082907 -37547243 - MIR SINE MIR -52 210 48 21 82 0 0 chr5 162083060 162083109 -37547041 + AT_rich Low_complexity Low_complexity 1 49 0 568 276 68 53 chr5 162083357 162083602 -37546548 - L1ME4a LINE L1 -128 5993 5736 1798 174 38 41 chr5 162083602 162083993 -37546157 - MLT1B LTR MaLR 0 390 1 568 276 68 53 chr5 162083993 162084214 -37545936 - L1ME4a LINE L1 -385 5736 5520 453 309 49 0 chr5 162085248 162085410 -37544740 + MIR SINE MIR 64 233 -29 2037 137 0 19 chr5 162085839 162086122 -37544028 + AluSc SINE Alu 1 279 -30 1088 98 6 0 chr5 162086122 162086286 -37543864 + (GA)n Simple_repeat Simple_repeat 2 166 0 2037 137 0 19 chr5 162086286 162086317 -37543833 + AluSc SINE Alu 279 309 0 446 218 95 7 chr5 162086910 162087057 -37543093 - L1ME4a LINE L1 -18 6103 5944 260 392 28 7 chr5 162087616 162087759 -37542391 - MIR3 SINE MIR -59 149 4 388 253 139 38 chr5 162090221 162090379 -37539771 + MIR SINE MIR 70 243 -19 238 283 70 52 chr5 162091206 162091478 -37538672 - L1ME4a LINE L1 -77 6044 5768 22 35 0 0 chr5 162092029 162092058 -37538092 + AT_rich Low_complexity Low_complexity 1 29 0 408 306 99 40 chr5 162092400 162092622 -37537528 + MIR SINE MIR 3 237 -25 227 287 183 17 chr5 162093666 162093781 -37536369 - Charlie8 DNA MER1_type -2141 276 143 329 379 57 19 chr5 162093976 162094187 -37535963 + MIR SINE MIR 37 255 -7 24 53 0 0 chr5 162096639 162096677 -37533473 + AT_rich Low_complexity Low_complexity 1 38 0 420 270 126 17 chr5 162097028 162097202 -37532948 - L2 LINE L2 -3 3310 3118 2509 111 8 16 chr5 162097416 162097794 -37532356 + THE1C LTR MaLR 1 375 0 1957 157 0 0 chr5 162097875 162098162 -37531988 + AluSx SINE Alu 1 287 -25 34 0 0 0 chr5 162098164 162098198 -37531952 + AT_rich Low_complexity Low_complexity 1 34 0 598 257 91 8 chr5 162098601 162098866 -37531284 + L1ME4a LINE L1 5835 6121 0 200 33 0 33 chr5 162099514 162099544 -37530606 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 225 334 88 75 chr5 162101048 162101410 -37528740 - L3b LINE CR1 -92 1491 1125 216 182 0 0 chr5 162103871 162103915 -37526235 + (CAG)n Simple_repeat Simple_repeat 1 44 0 388 291 110 0 chr5 162104871 162104998 -37525152 + MIR SINE MIR 120 260 -2 252 328 75 59 chr5 162105122 162105308 -37524842 - MIR SINE MIR -18 190 2 204 328 0 0 chr5 162105308 162105375 -37524775 + MIR SINE MIR 128 194 -68 548 376 50 0 chr5 162105376 162105594 -37524556 + MIR SINE MIR 23 251 -11 29 0 0 0 chr5 162106465 162106494 -37523656 + AT_rich Low_complexity Low_complexity 1 29 0 241 241 24 12 chr5 162106555 162106638 -37523512 + (TATAA)n Simple_repeat Simple_repeat 5 88 0 337 246 148 14 chr5 162106639 162106781 -37523369 + L2 LINE L2 3149 3309 -4 33 0 0 0 chr5 162106832 162106865 -37523285 + AT_rich Low_complexity Low_complexity 1 33 0 628 274 33 0 chr5 162107274 162107427 -37522723 + MIR SINE MIR 21 178 -84 694 213 38 13 chr5 162107443 162107631 -37522519 - MLT1F LTR MaLR -45 522 323 303 279 65 52 chr5 162108454 162108608 -37521542 - L2 LINE L2 -5 3308 3153 613 301 189 12 chr5 162109466 162110131 -37520019 - L2 LINE L2 -73 3240 2449 341 317 104 16 chr5 162110516 162110699 -37519451 + MIR SINE MIR 44 242 -20 217 78 78 0 chr5 162111130 162111181 -37518969 + T-rich Low_complexity Low_complexity 2 56 0 287 233 233 0 chr5 162111574 162111643 -37518507 - LTR37B LTR ERV1 -5 463 411 189 0 0 0 chr5 162111643 162111664 -37518486 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 287 233 233 0 chr5 162111664 162111714 -37518436 - LTR37B LTR ERV1 -57 411 316 1792 183 0 0 chr5 162112869 162113159 -37516991 - AluJo SINE Alu -11 301 12 2123 107 3 7 chr5 162113842 162114141 -37516009 - AluY SINE Alu -11 300 3 183 235 0 132 chr5 162114340 162114408 -37515742 - MIR3 SINE MIR -54 154 96 227 53 0 26 chr5 162114487 162114525 -37515625 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 7567 27 0 6 chr5 162114525 162115439 -37514711 - L1PA3 LINE L1 -10 6145 5232 2340 213 58 25 chr5 162117487 162118126 -37512024 + L1MC4 LINE L1 6696 7355 -687 1693 212 10 3 chr5 162118127 162118438 -37511712 + Tigger7 DNA MER2_type 5 317 -416 * 11137 137 37 13 chr5 162118436 162120318 -37509832 + Tigger1 DNA MER2_type 489 2416 -2 443 154 11 66 chr5 162120319 162120410 -37509740 + Tigger7 DNA MER2_type 2402 2487 0 612 155 7 123 chr5 162120418 162120485 -37509665 + L1MC4 LINE L1 7359 7400 -642 1999 132 0 23 chr5 162120485 162120814 -37509336 - AluSx SINE Alu 0 312 1 612 155 7 123 chr5 162120814 162120901 -37509249 + L1MC4 LINE L1 7400 7495 -547 2610 94 8 0 chr5 162124470 162124822 -37505328 + THE1A LTR MaLR 1 355 0 285 250 11 22 chr5 162125021 162125113 -37505037 + GA-rich Low_complexity Low_complexity 2 92 0 349 267 0 12 chr5 162125470 162125556 -37504594 - LTR33A LTR ERVL 0 523 439 673 266 108 63 chr5 162126298 162126496 -37503654 - ERVL LTR ERVL -263 5501 5313 1527 179 10 20 chr5 162126496 162126797 -37503353 - AluJo SINE Alu -14 298 1 673 266 108 63 chr5 162126797 162127041 -37503109 - ERVL LTR ERVL -451 5313 5039 346 240 0 42 chr5 162127232 162127328 -37502822 - ERVL LTR ERVL -962 4802 4711 1127 185 5 5 chr5 162127359 162127586 -37502564 - AluJb SINE Alu 0 310 84 2484 315 56 26 chr5 162127609 162127762 -37502388 - ERVL LTR ERVL -1097 4667 4520 1904 194 47 53 chr5 162127762 162127925 -37502225 + MLT1D LTR MaLR 1 163 -342 2061 149 0 0 chr5 162127925 162128233 -37501917 - AluJb SINE Alu -2 310 3 1904 194 47 53 chr5 162128233 162128575 -37501575 + MLT1D LTR MaLR 163 503 -2 2484 315 56 26 chr5 162128575 162129533 -37500617 - ERVL LTR ERVL -1244 4520 3523 248 212 0 0 chr5 162129561 162129587 -37500563 + A-rich Low_complexity Low_complexity 1 26 -40 2106 126 10 3 chr5 162129587 162129897 -37500253 + AluSx SINE Alu 1 312 0 248 212 0 0 chr5 162129897 162129936 -37500214 + A-rich Low_complexity Low_complexity 25 66 0 1521 311 170 27 chr5 162129990 162130305 -37499845 + L2 LINE L2 1591 1859 -1454 194 0 0 37 chr5 162130305 162130332 -37499818 + (TA)n Simple_repeat Simple_repeat 1 26 0 1521 311 170 27 chr5 162130332 162131290 -37498860 + L2 LINE L2 1859 3073 -240 1030 263 64 64 chr5 162131311 162131782 -37498368 - MLT1H LTR MaLR -4 545 75 253 298 44 76 chr5 162131955 162132113 -37498037 + L2 LINE L2 3112 3264 -49 21 71 0 0 chr5 162132582 162132624 -37497526 + AT_rich Low_complexity Low_complexity 1 42 0 2297 111 0 0 chr5 162133218 162133524 -37496626 + AluSx SINE Alu 1 306 -6 287 245 58 50 chr5 162133838 162133977 -37496173 + MIR SINE MIR 10 149 -113 189 74 0 0 chr5 162134117 162134144 -37496006 + (GA)n Simple_repeat Simple_repeat 2 28 0 372 77 0 0 chr5 162134162 162134214 -37495936 + (CA)n Simple_repeat Simple_repeat 1 52 0 1060 238 51 50 chr5 162134986 162135473 -37494677 + MER39 LTR ERV1 4 707 0 361 269 19 9 chr5 162135776 162135884 -37494266 + T-rich Low_complexity Low_complexity 4 112 0 343 267 10 114 chr5 162135980 162136110 -37494040 + L1ME1 LINE L1 4904 5007 -1139 2335 76 10 0 chr5 162136110 162136401 -37493749 + AluSc SINE Alu 1 294 -15 343 267 10 114 chr5 162136401 162136472 -37493678 + L1ME1 LINE L1 5007 5084 -1062 295 107 16 47 chr5 162136472 162136545 -37493605 - L1PA16 LINE L1 -1 6165 6094 3294 211 75 29 chr5 162136559 162137482 -37492668 + L1ME1 LINE L1 5130 6113 -53 219 326 15 61 chr5 162138631 162138763 -37491387 - MER5A DNA MER1_type -55 134 9 1679 210 51 10 chr5 162140561 162140971 -37489179 - MER95 LTR ERV 0 431 5 22 35 0 0 chr5 162141448 162141477 -37488673 + AT_rich Low_complexity Low_complexity 1 29 0 566 268 183 0 chr5 162142113 162142326 -37487824 - MIR SINE MIR 0 262 11 231 314 12 12 chr5 162142350 162142436 -37487714 - L3 LINE CR1 -219 1358 1273 * 377 294 24 40 chr5 162142434 162142560 -37487590 - L2 LINE L2 0 3313 3190 311 346 28 39 chr5 162142550 162142732 -37487418 - L3 LINE CR1 -301 1276 1097 * 881 135 32 32 chr5 162142742 162142896 -37487254 + MSTA LTR MaLR 1 154 -274 1240 193 68 44 chr5 162142896 162143191 -37486959 - MER61B LTR ERV1 0 425 124 1598 95 62 55 chr5 162143214 162143447 -37486703 + MSTA LTR MaLR 152 389 -39 2009 150 0 0 chr5 162143447 162143740 -37486410 - AluSq SINE Alu -20 293 1 1598 95 62 55 chr5 162143740 162143779 -37486371 + MSTA LTR MaLR 389 426 -2 869 139 11 11 chr5 162144399 162144579 -37485571 + CT-rich Low_complexity Low_complexity 1 180 0 226 295 167 45 chr5 162144747 162144903 -37485247 + MIR3 SINE MIR 5 146 -62 205 289 228 18 chr5 162146098 162146212 -37483938 - L2 LINE L2 -2 3311 3174 269 375 19 10 chr5 162146478 162146582 -37483568 - L3 LINE CR1 -349 1228 1124 2281 119 3 0 chr5 162146660 162146970 -37483180 - AluSx SINE Alu -1 311 1 746 150 53 96 chr5 162147120 162147307 -37482843 - MER3 DNA MER1_type -22 187 9 1549 116 170 8 chr5 162148301 162148560 -37481590 - AluSg1 SINE Alu -8 301 1 499 290 6 41 chr5 162149485 162149667 -37480483 + MIR SINE MIR 19 190 -67 599 317 67 9 chr5 162149876 162150105 -37480045 - MIR SINE MIR -32 230 1 194 307 30 30 chr5 162150218 162150319 -37479831 + L2 LINE L2 3120 3220 -93 226 258 88 31 chr5 162152158 162152317 -37477833 + L1M4 LINE L1 4303 4470 -1676 192 365 9 37 chr5 162152521 162152628 -37477522 - L3 LINE CR1 -156 1421 1318 324 259 191 8 chr5 162153056 162153187 -37476963 + MIR3 SINE MIR 39 193 -15 253 247 0 27 chr5 162153254 162153327 -37476823 + CT-rich Low_complexity Low_complexity 1 71 0 252 254 15 15 chr5 162153444 162153511 -37476639 + MIR SINE MIR 107 173 -89 1155 301 76 18 chr5 162153547 162153574 -37476576 - L2 LINE L2 -16 3297 3273 1782 252 42 12 chr5 162153574 162154078 -37476072 + LTR40a LTR ERVL 1 519 0 1155 301 76 18 chr5 162154078 162154580 -37475570 - L2 LINE L2 -40 3273 2737 392 337 126 61 chr5 162154584 162155154 -37474996 + L2 LINE L2 2298 2904 -410 248 295 115 0 chr5 162155401 162155479 -37474671 + L2 LINE L2 3227 3313 0 209 306 212 24 chr5 162155613 162155698 -37474452 - L2 LINE L2 -14 3299 3199 264 266 51 73 chr5 162156005 162156182 -37473968 + MER112 DNA MER1_type 1 173 -87 224 315 203 0 chr5 162157356 162157499 -37472651 - MIR SINE MIR -7 255 84 315 0 0 0 chr5 162157526 162157561 -37472589 + (TG)n Simple_repeat Simple_repeat 2 36 0 456 260 161 18 chr5 162158310 162158533 -37471617 - MER46C DNA MER2_type -4 334 80 210 98 0 118 chr5 162158533 162158584 -37471566 + (CAAAA)n Simple_repeat Simple_repeat 5 49 0 2094 121 0 0 chr5 162158874 162159231 -37470919 - AluSx SINE Alu 0 357 1 2794 98 0 5 chr5 162160244 162160621 -37469529 - THE1C LTR MaLR 0 375 1 1584 188 40 155 chr5 162160757 162161407 -37468743 - L1MD3 LINE L1 -17 7978 7404 311 247 34 22 chr5 162161408 162161497 -37468653 - MLT1F1 LTR MaLR -443 124 35 716 183 29 142 chr5 162161499 162161810 -37468340 - L1MC3 LINE L1 -690 7095 6820 342 0 0 0 chr5 162161812 162161850 -37468300 + (TC)n Simple_repeat Simple_repeat 2 39 0 212 0 36 0 chr5 162161849 162161877 -37468273 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 1057 152 79 61 chr5 162161893 162162114 -37468036 - L1MA9 LINE L1 -33 6279 6051 2090 134 0 0 chr5 162162114 162162412 -37467738 - AluSg SINE Alu -12 298 1 1057 152 79 61 chr5 162162412 162162467 -37467683 - L1MA9 LINE L1 -261 6051 5998 226 250 74 68 chr5 162163927 162164075 -37466075 + L2 LINE L2 3161 3309 -4 190 348 56 34 chr5 162165042 162165131 -37465019 - MIR3 SINE MIR -17 191 101 322 315 62 77 chr5 162165577 162165837 -37464313 - L3 LINE CR1 -118 1459 1204 752 139 7 13 chr5 162166470 162166621 -37463529 - L1MA8 LINE L1 0 6291 6142 703 255 38 11 chr5 162166826 162167010 -37463140 - MER5A DNA MER1_type 0 189 1 319 315 76 27 chr5 162167351 162167531 -37462619 + MIR SINE MIR 20 204 -58 3370 170 45 6 chr5 162167677 162168367 -37461783 + L1MB3 LINE L1 5458 6174 -9 298 225 155 62 chr5 162168750 162168879 -37461271 - MIR3 SINE MIR -14 194 54 621 273 8 25 chr5 162169218 162169456 -37460694 + L1MC4a LINE L1 5771 6004 -1804 584 213 83 30 chr5 162170252 162170421 -37459729 - MER96B DNA MER1_type? -239 178 1 306 0 0 0 chr5 162171833 162171867 -37458283 + (TG)n Simple_repeat Simple_repeat 1 34 0 789 139 273 0 chr5 162171943 162172001 -37458149 - L1MA6 LINE L1 0 6300 6259 342 115 0 0 chr5 162172001 162172053 -37458097 + (TA)n Simple_repeat Simple_repeat 1 52 0 789 139 273 0 chr5 162172053 162172210 -37457940 - L1MA6 LINE L1 -41 6259 6026 228 217 0 0 chr5 162174042 162174088 -37456062 + CT-rich Low_complexity Low_complexity 3 48 0 251 327 131 12 chr5 162174179 162174347 -37455803 - MIR SINE MIR -17 245 58 194 204 23 0 chr5 162174996 162175040 -37455110 + L2 LINE L2 2932 2976 -296 489 304 29 29 chr5 162175188 162175395 -37454755 + MIR SINE MIR 56 262 0 3132 194 33 69 chr5 162176899 162177655 -37452495 + MER44D DNA MER2_type 1 601 -4 393 244 67 22 chr5 162178108 162178243 -37451907 + L3 LINE CR1 964 1104 -473 274 315 112 7 chr5 162179716 162179859 -37450291 - L3 LINE CR1 -286 1291 1134 600 333 14 14 chr5 162179870 162180092 -37450058 + MLT1H1 LTR MaLR 1 222 -333 280 275 38 0 chr5 162180231 162180311 -37449839 + MLT1G1 LTR MaLR 508 590 -5 365 183 15 38 chr5 162180733 162180865 -37449285 + L1MC4 LINE L1 7828 8042 0 552 286 121 35 chr5 162181118 162181349 -37448801 - MIR SINE MIR 0 262 12 2030 150 86 20 chr5 162181515 162181922 -37448228 + MER57B LTR ERV1 1 434 0 660 243 20 9 chr5 162181926 162182189 -37447961 + MER57B-int LTR ERV1 3 299 -7238 297 266 6 90 chr5 162182378 162182555 -37447595 + MER57B-int LTR ERV1 825 986 -5815 627 249 21 92 chr5 162184303 162184641 -37445509 + MER57-int LTR ERV1 6831 7144 -393 2422 167 5 11 chr5 162184641 162185078 -37445072 + MER57B LTR ERV1 1 434 0 873 243 73 4 chr5 162185236 162185483 -37444667 - REP3 LTR ERV -7 555 292 10950 92 8 14 chr5 162185874 162187546 -37442604 + HERVH LTR ERV1 968 2629 -5084 1356 198 5 128 chr5 162187682 162188127 -37442023 - LTR9 LTR ERV1 -222 390 1 610 249 102 45 chr5 162188170 162188415 -37441735 - MIR SINE MIR -1 261 3 341 313 43 9 chr5 162188637 162188752 -37441398 - L2 LINE L2 -307 2965 2847 23 0 0 0 chr5 162189402 162189425 -37440725 + AT_rich Low_complexity Low_complexity 1 23 0 40 87 0 0 chr5 162189957 162190060 -37440090 + AT_rich Low_complexity Low_complexity 1 103 0 194 182 0 0 chr5 162190641 162190674 -37439476 - MIR SINE MIR -66 142 110 2258 119 0 0 chr5 162191435 162191738 -37438412 - AluSc SINE Alu -6 303 1 737 82 9 0 chr5 162192455 162192565 -37437585 + (GGAA)n Simple_repeat Simple_repeat 4 114 0 182 274 110 0 chr5 162193037 162193110 -37437040 - MIR3 SINE MIR -15 193 113 188 254 0 6 chr5 162193600 162193639 -37436511 - L2 LINE L2 -21 3292 3213 456 233 136 44 chr5 162193885 162194091 -37436059 + L2 LINE L2 3083 3307 -6 27 0 0 0 chr5 162194351 162194378 -37435772 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr5 162194454 162194484 -37435666 + AT_rich Low_complexity Low_complexity 1 30 0 240 239 0 0 chr5 162195737 162195783 -37434367 - L2 LINE L2 -19 3294 3249 181 348 0 0 chr5 162197678 162197747 -37432403 - MIR SINE MIR -70 192 124 291 356 0 10 chr5 162198531 162198635 -37431515 - MIR SINE MIR -157 105 3 1891 147 10 29 chr5 162200030 162200342 -37429808 - AluSx SINE Alu -6 306 1 21 0 0 0 chr5 162200345 162200366 -37429784 + AT_rich Low_complexity Low_complexity 1 21 0 190 171 29 0 chr5 162200505 162200540 -37429610 - MIR SINE MIR -84 124 89 2299 125 34 0 chr5 162200860 162201212 -37428938 + THE1B LTR MaLR 1 364 0 281 282 276 6 chr5 162201212 162201386 -37428764 - MIR SINE MIR -4 258 38 2907 69 5 3 chr5 162201852 162202242 -37427908 - L1PA7 LINE L1 0 6154 5764 1454 65 5 0 chr5 162202242 162202441 -37427709 - L1PA7 LINE L1 -644 5510 5311 4899 64 0 2 chr5 162202441 162203051 -37427099 + L1PA7 LINE L1 5533 6154 0 232 366 98 0 chr5 162203338 162203450 -37426700 - L2 LINE L2 -3 3269 3147 541 274 128 8 chr5 162203664 162203898 -37426252 + MIR SINE MIR 1 262 0 272 239 155 0 chr5 162205098 162205169 -37424981 + MER94 DNA DNA 12 93 -41 2599 143 33 39 chr5 162205479 162205762 -37424388 - MER31A LTR ERV1 0 485 205 2313 102 3 0 chr5 162205762 162206067 -37424083 + AluSg SINE Alu 1 306 -4 2599 143 33 39 chr5 162206067 162206271 -37423879 - MER31A LTR ERV1 -280 205 1 683 286 53 13 chr5 162206408 162206635 -37423515 - MIR SINE MIR -12 250 15 2484 63 0 3 chr5 162206724 162207024 -37423126 - AluY SINE Alu -12 299 1 200 294 118 0 chr5 162207252 162207320 -37422830 - MIR SINE MIR -121 141 66 203 176 39 0 chr5 162207377 162207428 -37422722 + CT-rich Low_complexity Low_complexity 4 56 0 18630 112 64 39 chr5 162207429 162208843 -37421307 - MER41B-int LTR ERV1 -2616 3330 1953 1434 143 131 38 chr5 162208843 162209186 -37420964 + THE1C LTR MaLR 1 375 0 18630 112 64 39 chr5 162209186 162211018 -37419132 - MER41B-int LTR ERV1 -3993 1953 3 3898 141 8 14 chr5 162211020 162211659 -37418491 - MER41B LTR ERV1 0 635 1 288 394 28 0 chr5 162211858 162212038 -37418112 + MIR SINE MIR 46 230 -32 266 235 59 47 chr5 162212318 162212403 -37417747 + L2 LINE L2 3187 3272 0 41042 32 21 1 chr5 162214643 162220670 -37409480 + L1PA2 LINE L1 4 6153 -2 23 33 0 0 chr5 162220685 162220715 -37409435 + AT_rich Low_complexity Low_complexity 1 30 0 444 266 50 75 chr5 162220766 162221390 -37408760 - L1MEc LINE L1 -3580 2549 1979 471 256 111 45 chr5 162221616 162221985 -37408165 - L1MEc LINE L1 -4571 1568 1180 251 240 64 16 chr5 162222093 162222218 -37407932 - L1MEc LINE L1 -5113 1019 889 342 383 91 0 chr5 162222337 162222590 -37407560 - L1MEc LINE L1 -5323 796 521 325 288 114 15 chr5 162223028 162223160 -37406990 + MIR SINE MIR 118 262 0 1712 132 0 0 chr5 162224594 162224837 -37405313 + AluSq SINE Alu 47 289 -24 360 329 88 0 chr5 162224844 162224981 -37405169 - MIR SINE MIR -21 241 93 196 403 89 0 chr5 162225062 162225186 -37404964 + L2 LINE L2 3179 3313 0 597 259 31 54 chr5 162225846 162226070 -37404080 - MIR SINE MIR -26 236 18 255 419 7 0 chr5 162226267 162226415 -37403735 - MIR3 SINE MIR -23 185 37 207 369 77 56 chr5 162226411 162226606 -37403544 - L2 LINE L2 0 3272 3074 * 2146 116 0 7 chr5 162226646 162226947 -37403203 - AluSg1 SINE Alu -10 299 1 238 356 6 6 chr5 162227053 162227233 -37402917 + (TA)n Simple_repeat Simple_repeat 1 180 0 381 294 50 32 chr5 162228064 162228239 -37401911 + MER5A DNA MER1_type 1 189 0 270 267 42 25 chr5 162229173 162229293 -37400857 - MER113 DNA MER1_type? -399 122 1 298 362 43 7 chr5 162229511 162229652 -37400498 + MIR SINE MIR 3 148 -114 926 126 77 38 chr5 162229652 162229748 -37400402 - MER46A DNA MER2_type 0 236 134 371 143 330 36 chr5 162229748 162229860 -37400290 + MER46A DNA MER2_type 3 147 -89 486 217 0 0 chr5 162230031 162230114 -37400036 + FRAM/FAM SINE Alu 1 81 -95 567 276 119 28 chr5 162230363 162230649 -37399501 - L1MC/D LINE L1 -2001 5807 5496 222 211 123 123 chr5 162230812 162230926 -37399224 - MIR3 SINE MIR -13 195 82 1400 154 131 12 chr5 162230936 162231195 -37398955 - AluSg1 SINE Alu -19 290 1 3354 116 55 148 chr5 162232067 162232791 -37397359 + Tigger3b DNA MER2_type 18 711 -2318 848 167 15 0 chr5 162232791 162232923 -37397227 + FLAM_C SINE Alu 1 134 -9 3354 116 55 148 chr5 162232923 162233401 -37396749 + Tigger3b DNA MER2_type 711 1232 0 399 286 31 0 chr5 162233436 162233534 -37396616 + MIR SINE MIR 42 142 -66 282 315 23 15 chr5 162233621 162233751 -37396399 - MLT1K LTR MaLR 0 588 458 1153 96 11 0 chr5 162233805 162233983 -37396167 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 536 119 34 17 chr5 162233985 162234103 -37396047 + CT-rich Low_complexity Low_complexity 3 122 0 1121 67 30 6 chr5 162234108 162234273 -37395877 - L1PB1 LINE L1 -51 6100 5932 265 318 262 0 chr5 162234287 162234394 -37395756 - MLT1K LTR MaLR -216 372 238 284 284 105 0 chr5 162234488 162234583 -37395567 - MLT1K LTR MaLR -467 121 17 1122 199 31 0 chr5 162234597 162234823 -37395327 - MLT1A1 LTR MaLR 0 365 133 673 198 0 0 chr5 162234984 162235110 -37395040 - MLT1A1 LTR MaLR -239 126 1 181 314 0 0 chr5 162235454 162235505 -37394645 + L2 LINE L2 2779 2829 -485 480 295 42 17 chr5 162235990 162236346 -37393804 - L1MEd LINE L1 -4969 1150 786 313 253 0 0 chr5 162236404 162236479 -37393671 - L1MEd LINE L1 -5443 676 602 2537 127 11 0 chr5 162237676 162238047 -37392103 - THE1C LTR MaLR 0 375 1 9816 117 34 10 chr5 162238047 162239072 -37391078 - THE1C-int LTR MaLR 0 1580 503 2691 99 0 0 chr5 162239072 162239425 -37390725 + THE1A LTR MaLR 3 355 0 9816 117 34 10 chr5 162239425 162239941 -37390209 - THE1C-int LTR MaLR -1077 503 1 2497 112 27 0 chr5 162239941 162240306 -37389844 - THE1C LTR MaLR 0 375 1 270 73 0 0 chr5 162240796 162240837 -37389313 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 252 0 0 0 chr5 162240837 162240865 -37389285 + (CA)n Simple_repeat Simple_repeat 1 28 0 585 243 133 44 chr5 162243130 162243356 -37386794 - MIR SINE MIR -2 260 15 210 343 121 18 chr5 162243895 162244071 -37386079 - L2 LINE L2 -83 3230 3074 1808 183 131 19 chr5 162244071 162244491 -37385659 - MLT1C LTR MaLR 0 467 1 210 343 121 18 chr5 162244491 162244625 -37385525 - L2 LINE L2 -239 3074 2883 243 286 211 3 chr5 162244899 162245026 -37385124 + MIR SINE MIR 19 146 -62 312 306 57 99 chr5 162245857 162245923 -37384227 - L1MC4a LINE L1 -1807 6001 5934 414 57 0 0 chr5 162245923 162245976 -37384174 + (TA)n Simple_repeat Simple_repeat 2 54 0 312 306 57 99 chr5 162245976 162246159 -37383991 - L1MC4a LINE L1 -1874 5934 5765 1283 186 138 15 chr5 162246159 162246310 -37383840 - AluJb SINE Alu 0 302 171 189 0 0 0 chr5 162246310 162246331 -37383819 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1283 186 138 15 chr5 162246331 162246448 -37383702 - AluJb SINE Alu -131 171 1 312 306 57 99 chr5 162246448 162246511 -37383639 - L1MC4a LINE L1 -2043 5765 5701 490 262 101 42 chr5 162246544 162246712 -37383438 + L2 LINE L2 3133 3310 -3 221 348 80 0 chr5 162246755 162246867 -37383283 + L2 LINE L2 3177 3297 -16 936 254 93 54 chr5 162247005 162247718 -37382432 + L2 LINE L2 2557 3304 -9 265 378 20 14 chr5 162247821 162247969 -37382181 + MIR SINE MIR 5 153 -109 372 271 176 43 chr5 162248538 162248748 -37381402 + MIR SINE MIR 25 262 0 252 325 24 24 chr5 162249003 162249129 -37381021 + L2 LINE L2 2988 3113 -159 217 263 38 0 chr5 162249263 162249343 -37380807 + MIR SINE MIR 179 261 -1 431 314 72 0 chr5 162249925 162250078 -37380072 - L2 LINE L2 -9 3304 3141 324 330 82 33 chr5 162251364 162251546 -37378604 + MIR SINE MIR 58 248 -14 190 389 59 32 chr5 162251622 162251961 -37378189 + L2 LINE L2 2563 2910 -404 256 320 80 0 chr5 162252060 162252160 -37377990 - L2 LINE L2 0 3313 3206 342 0 0 0 chr5 162252181 162252219 -37377931 + (TG)n Simple_repeat Simple_repeat 2 39 0 2141 127 0 7 chr5 162253009 162253308 -37376842 - AluSx SINE Alu -15 297 1 521 347 63 52 chr5 162254022 162254447 -37375703 + L2 LINE L2 2607 3031 -282 2017 146 10 3 chr5 162254447 162254756 -37375394 - AluJb SINE Alu -1 311 1 251 228 59 69 chr5 162255078 162255179 -37374971 - L2 LINE L2 -239 3033 2934 188 305 85 0 chr5 162255205 162255264 -37374886 + L2 LINE L2 2986 3049 -223 599 278 78 0 chr5 162256373 162256553 -37373597 - MIR SINE MIR -57 205 12 612 251 118 19 chr5 162256720 162256931 -37373219 + MIR SINE MIR 31 262 0 221 360 57 11 chr5 162256972 162257147 -37373003 + L2 LINE L2 3099 3281 -32 1878 151 0 0 chr5 162257235 162257514 -37372636 + AluSx SINE Alu 1 279 -33 360 0 0 0 chr5 162257516 162257556 -37372594 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 995 130 26 0 chr5 162257691 162257845 -37372305 - L1MA1 LINE L1 0 6302 6145 2809 133 48 42 chr5 162257942 162258214 -37371936 + L1MA8 LINE L1 5709 5978 -313 2210 114 3 0 chr5 162258214 162258513 -37371637 + AluSg SINE Alu 1 300 -10 2809 133 48 42 chr5 162258513 162258818 -37371332 + L1MA8 LINE L1 5978 6290 -1 532 271 45 68 chr5 162259272 162259493 -37370657 - MIR SINE MIR -32 230 15 2375 59 0 10 chr5 162260159 162260464 -37369686 - AluY SINE Alu -9 302 1 1923 160 9 80 chr5 162260567 162261029 -37369121 + L1MB8 LINE L1 5748 6176 -2 283 330 5 91 chr5 162261672 162261869 -37368281 + MIR SINE MIR 2 181 -81 458 338 10 37 chr5 162262221 162262595 -37367555 - L2 LINE L2 -774 2540 2217 248 361 110 14 chr5 162263337 162263556 -37366594 + L2 LINE L2 2546 2785 -529 186 372 44 28 chr5 162263652 162263832 -37366318 + L2 LINE L2 2884 3066 -206 269 68 23 0 chr5 162263912 162263956 -37366194 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 210 143 0 0 chr5 162264039 162264074 -37366076 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 233 254 83 89 chr5 162264351 162264520 -37365630 - L2 LINE L2 -568 2746 2579 217 129 0 0 chr5 162265131 162265162 -37364988 + MIR SINE MIR 71 101 -161 * 589 275 201 20 chr5 162265160 162265712 -37364438 + L2 LINE L2 2645 3309 -4 258 274 44 89 chr5 162265738 162265873 -37364277 + MIR SINE MIR 110 238 -24 328 305 33 26 chr5 162266559 162266710 -37363440 - MER5A DNA MER1_type -2 187 36 1645 144 3 10 chr5 162267003 162267295 -37362855 - HERVH LTR ERV1 -3932 3781 3492 856 135 20 0 chr5 162267285 162267433 -37362717 - HERVH LTR ERV1 -4423 3290 3140 * 12489 102 52 16 chr5 162267412 162270189 -37359961 - HERVH LTR ERV1 -4718 2995 1 3401 62 5 7 chr5 162270191 162270640 -37359510 - LTR7 LTR ERV1 -2 448 1 1717 123 25 18 chr5 162270644 162270928 -37359222 + LTR8 LTR ERV1 406 691 0 2394 192 81 10 chr5 162270970 162271491 -37358659 - MER74A LTR ERVL 0 558 1 567 268 61 48 chr5 162271555 162271783 -37358367 + L2 LINE L2 3083 3313 0 557 259 105 87 chr5 162272223 162272671 -37357479 - LTR33A LTR ERVL 0 523 68 251 319 19 32 chr5 162272833 162272990 -37357160 + PABL_A LTR ERV1 1 155 -505 776 215 5 27 chr5 162273122 162273308 -37356842 + PABL_B LTR ERV1 468 649 -18 275 133 0 0 chr5 162275096 162275141 -37355009 - L1MA5 LINE L1 0 6300 6256 185 363 44 18 chr5 162275153 162275266 -37354884 - L3 LINE CR1 -2 1575 1460 277 349 63 8 chr5 162275458 162275584 -37354566 - L2 LINE L2 -1 3312 3180 199 399 11 27 chr5 162276375 162276558 -37353592 + L2 LINE L2 2688 2867 -447 754 279 189 15 chr5 162277110 162277511 -37352639 - L2 LINE L2 -13 3300 2830 277 312 26 0 chr5 162277952 162278049 -37352101 + MIR SINE MIR 46 143 -66 202 317 59 0 chr5 162278428 162278529 -37351621 - L3 LINE CR1 -325 1252 1146 28 61 0 0 chr5 162278540 162278589 -37351561 + AT_rich Low_complexity Low_complexity 1 49 0 290 361 8 16 chr5 162278843 162278965 -37351185 + L2 LINE L2 2766 2886 -428 204 40 0 0 chr5 162279120 162279145 -37351005 + (CTCTG)n Simple_repeat Simple_repeat 4 28 0 1005 304 80 2 chr5 162279190 162279615 -37350535 + LTR33A LTR ERVL 62 519 -4 716 329 23 10 chr5 162279752 162280059 -37350091 - MLT1I LTR MaLR -12 397 87 447 340 77 49 chr5 162280135 162280747 -37349403 + L2 LINE L2 1947 2575 -739 423 89 25 13 chr5 162280758 162280837 -37349313 + (TTTC)n Simple_repeat Simple_repeat 2 81 0 1488 159 45 12 chr5 162280837 162281082 -37349068 - AluJb SINE Alu -59 253 1 266 264 114 43 chr5 162281311 162281451 -37348699 + L2 LINE L2 3161 3310 -3 * 296 264 226 10 chr5 162281430 162281638 -37348512 - L3 LINE CR1 -725 852 600 3945 178 18 3 chr5 162281783 162282525 -37347625 + L1MD1 LINE L1 5482 6234 -8 255 261 25 8 chr5 162282548 162282667 -37347483 + (TA)n Simple_repeat Simple_repeat 1 121 0 28 29 0 0 chr5 162282827 162282862 -37347288 + AT_rich Low_complexity Low_complexity 1 35 0 226 284 108 20 chr5 162282881 162282983 -37347167 - L1ME LINE L1 -391 5730 5620 288 345 131 39 chr5 162283648 162284083 -37346067 - L2 LINE L2 -8 3305 2831 503 343 188 15 chr5 162284205 162284672 -37345478 + L2 LINE L2 2429 2976 -338 320 240 60 0 chr5 162284910 162285010 -37345140 + L1MA10 LINE L1 6205 6310 -24 358 318 31 90 chr5 162285080 162285303 -37344847 + L1ME LINE L1 5564 5773 -348 803 83 9 0 chr5 162285663 162285771 -37344379 + L1PA10 LINE L1 6054 6162 -6 337 352 4 89 chr5 162286076 162286357 -37343793 + L2 LINE L2 2927 3183 -89 1155 301 41 51 chr5 162286435 162287064 -37343086 - L2 LINE L2 -8 3305 2681 269 313 38 23 chr5 162287195 162287326 -37342824 + MIR SINE MIR 35 167 -95 200 333 148 9 chr5 162288593 162288701 -37341449 + MIR SINE MIR 12 135 -73 22 0 0 0 chr5 162288727 162288749 -37341401 + AT_rich Low_complexity Low_complexity 1 22 0 2092 102 21 3 chr5 162289395 162289680 -37340470 - AluY SINE Alu -10 301 12 1812 97 8 0 chr5 162289680 162289928 -37340222 - AluSp SINE Alu -37 276 27 24 32 0 0 chr5 162290444 162290475 -37339675 + AT_rich Low_complexity Low_complexity 1 31 0 2101 108 14 17 chr5 162290893 162291189 -37338961 + AluSx SINE Alu 1 295 -17 692 155 0 103 chr5 162291254 162291409 -37338741 + AluJb SINE Alu 1 139 -173 341 319 34 8 chr5 162291589 162291708 -37338442 - MIR3 SINE MIR -77 131 10 22 35 0 0 chr5 162292411 162292440 -37337710 + AT_rich Low_complexity Low_complexity 1 29 0 199 321 24 12 chr5 162292820 162292904 -37337246 - MIR3 SINE MIR -121 87 3 24 32 0 0 chr5 162292945 162292976 -37337174 + AT_rich Low_complexity Low_complexity 1 31 0 470 262 16 8 chr5 162293376 162293498 -37336652 + L2 LINE L2 3187 3309 -4 347 250 112 43 chr5 162293500 162293616 -37336534 - MIR SINE MIR -110 152 29 390 342 126 40 chr5 162294291 162294885 -37335265 - L2 LINE L2 -672 2642 1998 193 387 47 9 chr5 162295015 162295121 -37335029 - L2 LINE L2 0 3313 3204 251 346 119 30 chr5 162295749 162296052 -37334098 - L2 LINE L2 -148 3165 2836 180 0 0 0 chr5 162296581 162296601 -37333549 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 332 309 115 50 chr5 162296689 162296828 -37333322 - MER5A DNA MER1_type -3 186 39 231 261 58 101 chr5 162297331 162297469 -37332681 - MIR SINE MIR -111 151 20 263 326 11 11 chr5 162298136 162298228 -37331922 - MIR SINE MIR -131 131 40 1925 150 7 7 chr5 162298285 162298591 -37331559 + AluJo SINE Alu 3 308 -4 629 314 21 5 chr5 162298633 162298827 -37331323 - MIR SINE MIR -53 209 13 731 206 16 32 chr5 162299348 162299537 -37330613 + MER53 DNA DNA 3 188 -1 1786 175 0 0 chr5 162299869 162300161 -37329989 - AluJb SINE Alu -20 292 1 337 318 0 1 chr5 162300403 162300508 -37329642 - MIR SINE MIR -69 139 36 215 282 82 55 chr5 162300797 162300907 -37329243 + MIR SINE MIR 24 136 -126 369 114 25 13 chr5 162300928 162301007 -37329143 + (TA)n Simple_repeat Simple_repeat 1 80 0 197 108 27 0 chr5 162301048 162301085 -37329065 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 23 54 0 0 chr5 162301166 162301203 -37328947 + AT_rich Low_complexity Low_complexity 1 37 0 259 306 86 0 chr5 162301406 162301515 -37328635 - MIR SINE MIR -63 145 56 337 271 55 44 chr5 162301832 162301998 -37328152 + MIR SINE MIR 37 202 -60 602 303 122 0 chr5 162302003 162302224 -37327926 - MIR SINE MIR 0 262 15 2211 101 0 7 chr5 162303260 162303557 -37326593 + AluSg SINE Alu 1 295 -15 1228 115 24 99 chr5 162303600 162303733 -37326417 - L1PA11 LINE L1 0 6174 6067 2368 97 0 0 chr5 162303733 162304042 -37326108 - AluSc SINE Alu 0 309 1 1228 115 24 99 chr5 162304042 162304161 -37325989 - L1PA11 LINE L1 -107 6067 5941 2877 136 19 53 chr5 162304223 162304791 -37325359 - L1MA8 LINE L1 -11 6280 5732 188 339 27 36 chr5 162304844 162304956 -37325194 + L2 LINE L2 2989 3099 -173 279 0 0 0 chr5 162305078 162305109 -37325041 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 369 189 0 94 chr5 162305145 162305251 -37324899 + MER31A LTR ERV1 357 452 -33 352 364 16 16 chr5 162305895 162306024 -37324126 + MER91A DNA MER1_type 52 180 -16 354 351 138 23 chr5 162306176 162306561 -37323589 + L2 LINE L2 2883 3311 -2 290 323 16 31 chr5 162306588 162306715 -37323435 + MIR SINE MIR 60 184 -78 736 262 53 37 chr5 162307069 162307313 -37322837 + MIR SINE MIR 2 249 -13 666 0 0 0 chr5 162307323 162307397 -37322753 + (CTATT)n Simple_repeat Simple_repeat 5 78 0 450 0 0 0 chr5 162307436 162307486 -37322664 + (CCA)n Simple_repeat Simple_repeat 3 52 0 366 295 86 14 chr5 162307564 162307703 -37322447 - MIR SINE MIR -107 155 7 651 130 30 0 chr5 162307953 162308084 -37322066 + MER53 DNA DNA 23 157 -32 264 170 19 0 chr5 162308095 162308148 -37322002 - MER53 DNA DNA -127 62 9 477 329 82 73 chr5 162308568 162308936 -37321214 - L2 LINE L2 -5 3267 2897 202 399 120 6 chr5 162309153 162309469 -37320681 + L2 LINE L2 2403 2754 -560 202 375 31 0 chr5 162309545 162309609 -37320541 + MIR SINE MIR 7 72 -190 228 281 49 12 chr5 162309712 162309794 -37320356 + MIR SINE MIR 75 159 -103 33 56 0 0 chr5 162309800 162309854 -37320296 + AT_rich Low_complexity Low_complexity 1 54 0 1153 263 129 30 chr5 162310186 162310607 -37319543 - L1MEc LINE L1 -3342 2873 2495 1611 104 0 173 chr5 162310607 162310971 -37319179 - AluSx SINE Alu -11 301 1 1153 263 129 30 chr5 162310971 162311323 -37318827 - L1MEc LINE L1 -3720 2495 2095 190 231 19 0 chr5 162311410 162311462 -37318688 - MIR SINE MIR -61 201 149 2750 190 20 5 chr5 162311798 162312355 -37317795 - L1MB8 LINE L1 -244 5934 5370 * 3447 243 104 59 chr5 162312353 162314776 -37315374 + L1ME1 LINE L1 3625 6158 -8 328 360 7 7 chr5 162314890 162315026 -37315124 + MIR3 SINE MIR 62 197 -11 246 364 0 10 chr5 162315523 162315622 -37314528 - MIR SINE MIR -136 126 29 370 395 74 28 chr5 162315710 162316281 -37313869 - L2 LINE L2 0 3272 2619 39 80 0 0 chr5 162316505 162316593 -37313557 + AT_rich Low_complexity Low_complexity 1 88 0 385 158 33 71 chr5 162316605 162316789 -37313361 + (TATAA)n Simple_repeat Simple_repeat 2 178 0 625 329 83 47 chr5 162316907 162317592 -37312558 - L2 LINE L2 -798 2516 1807 2204 92 7 16 chr5 162317921 162318227 -37311923 + AluSq SINE Alu 3 305 -8 413 325 33 38 chr5 162319764 162319976 -37310174 + MIR SINE MIR 23 233 -29 25 65 0 0 chr5 162320101 162320147 -37310003 + AT_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr5 162320181 162320210 -37309940 + AT_rich Low_complexity Low_complexity 1 29 0 597 287 120 14 chr5 162320225 162320500 -37309650 - L3 LINE CR1 -179 1398 1095 1546 123 35 0 chr5 162320576 162320804 -37309346 + AluSx SINE Alu 56 291 -21 2091 167 94 0 chr5 162321157 162321540 -37308610 - MSTB1 LTR MaLR -4 428 10 240 190 13 25 chr5 162321666 162321745 -37308405 + (TTTA)n Simple_repeat Simple_repeat 2 79 0 842 228 61 5 chr5 162321855 162322052 -37308098 - MER3 DNA MER1_type -1 208 1 288 0 0 0 chr5 162322099 162322131 -37308019 + (CA)n Simple_repeat Simple_repeat 2 33 0 572 295 70 60 chr5 162322173 162322424 -37307726 - MLT1K LTR MaLR -14 598 351 1976 184 18 32 chr5 162322424 162322825 -37307325 - MSTD LTR MaLR 0 396 2 572 295 70 60 chr5 162322825 162322857 -37307293 - MLT1K LTR MaLR -261 351 321 1950 114 7 11 chr5 162322857 162323137 -37307013 - AluSq SINE Alu -2 311 33 572 295 70 60 chr5 162323137 162323378 -37306772 - MLT1K LTR MaLR -291 321 85 21 0 0 0 chr5 162323456 162323477 -37306673 + AT_rich Low_complexity Low_complexity 1 21 0 230 227 0 45 chr5 162323775 162323841 -37306309 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 21 0 0 0 chr5 162325169 162325190 -37304960 + AT_rich Low_complexity Low_complexity 1 21 0 206 359 29 0 chr5 162325225 162325328 -37304822 - L2 LINE L2 -626 2688 2583 581 314 14 5 chr5 162326056 162326263 -37303887 + LTR33 LTR ERVL 10 218 -303 355 342 163 13 chr5 162326483 162326636 -37303514 + MER5A DNA MER1_type 14 178 0 420 292 108 32 chr5 162326638 162326823 -37303327 + MIR SINE MIR 1 199 -63 396 188 89 50 chr5 162326850 162326873 -37303277 - L2 LINE L2 -3 3310 3289 1074 243 37 53 chr5 162326873 162327251 -37302899 + MER93b LTR ERV1 2 373 0 396 188 89 50 chr5 162327251 162327328 -37302822 - L2 LINE L2 -24 3289 3206 442 294 16 32 chr5 162327614 162327803 -37302347 + MIR SINE MIR 14 196 -65 2297 100 10 0 chr5 162328673 162328982 -37301168 - AluSq SINE Alu -1 312 1 336 232 205 9 chr5 162329426 162329538 -37300612 + MIR SINE MIR 36 169 -93 550 318 36 36 chr5 162329668 162329891 -37300259 - MIR SINE MIR 0 262 40 288 0 0 0 chr5 162329973 162330005 -37300145 + (TG)n Simple_repeat Simple_repeat 1 32 0 189 0 0 0 chr5 162330004 162330025 -37300125 + (GA)n Simple_repeat Simple_repeat 1 21 0 * 3474 169 8 12 chr5 162330031 162330119 -37300031 - L1MA4A LINE L1 -133 6170 6083 2348 82 0 3 chr5 162330119 162330410 -37299740 + AluSx SINE Alu 9 298 -14 3474 169 8 12 chr5 162330410 162330962 -37299188 - L1MA4A LINE L1 -220 6083 5533 * 14254 151 27 13 chr5 162330960 162332803 -37297347 - L1 LINE L1 -3784 3781 1966 2723 16 0 6 chr5 162332803 162333116 -37297034 - AluY SINE Alu 0 311 1 14254 151 27 13 chr5 162333116 162334979 -37295171 - L1 LINE L1 -5599 1966 15 447 172 0 7 chr5 162335159 162335248 -37294902 - L1MC/D LINE L1 -690 5552 5469 42530 35 23 1 chr5 162335253 162341268 -37288882 - L1PA3 LINE L1 0 6155 7 3991 189 45 19 chr5 162341269 162342191 -37287959 - L1P4 LINE L1 -675 5491 4541 2129 116 3 28 chr5 162342191 162342509 -37287641 - AluSx SINE Alu -2 310 1 3991 189 45 19 chr5 162342509 162342657 -37287493 - L1P4 LINE L1 -1625 4541 4398 353 171 98 0 chr5 162342665 162342747 -37287403 - L1MC/D LINE L1 -818 5328 5239 849 223 112 0 chr5 162342747 162342935 -37287215 - MER82 DNA MER2_type -1 652 444 357 351 70 0 chr5 162342955 162343126 -37287024 + MIR SINE MIR 2 184 -78 276 138 53 11 chr5 162343160 162343254 -37286896 + (TA)n Simple_repeat Simple_repeat 1 98 0 346 253 12 12 chr5 162343304 162343387 -37286763 - MER82 DNA MER2_type -557 96 14 536 220 0 0 chr5 162343408 162343540 -37286610 - L1M4 LINE L1 -904 5242 5111 259 368 32 11 chr5 162343654 162343749 -37286401 - MIR SINE MIR -148 114 18 221 281 35 0 chr5 162344312 162344369 -37285781 + polypyrimidine Low_complexity Low_complexity 1 59 0 1042 244 53 4 chr5 162344558 162344824 -37285326 + MER58B DNA MER1_type 1 279 -62 781 247 47 93 chr5 162344985 162345345 -37284805 + L1MEc LINE L1 2001 2335 -4061 3907 157 15 31 chr5 162345345 162346130 -37284020 - L1MA7 LINE L1 0 6291 5519 781 247 47 93 chr5 162346130 162346254 -37283896 + L1MEc LINE L1 2335 2463 -3933 441 169 13 0 chr5 162346259 162346336 -37283814 + MER58B DNA MER1_type 262 339 -2 28 29 0 0 chr5 162346390 162346425 -37283725 + AT_rich Low_complexity Low_complexity 1 35 0 2188 86 10 48 chr5 162346425 162346739 -37283411 - AluSg SINE Alu -8 302 1 259 248 64 45 chr5 162346752 162346909 -37283241 + Charlie7 DNA MER1_type 2452 2611 -1 732 211 7 0 chr5 162346911 162347058 -37283092 + L1PB3 LINE L1 6007 6154 0 513 309 87 16 chr5 162347657 162347909 -37282241 + L3 LINE CR1 1093 1362 -215 180 339 37 28 chr5 162349038 162349147 -37281003 + MIR SINE MIR 153 262 0 1036 227 59 23 chr5 162349418 162349674 -37280476 - MLT1D LTR MaLR -139 366 102 350 68 0 0 chr5 162349695 162349739 -37280411 + MLT1D LTR MaLR 48 91 -414 701 275 26 12 chr5 162351267 162351487 -37278663 + MIR SINE MIR 38 262 0 294 175 0 0 chr5 162352594 162352674 -37277476 + T-rich Low_complexity Low_complexity 1 80 0 9296 17 0 1 chr5 162352674 162354547 -37275603 - L1HS LINE L1 0 6155 4284 4918 21 0 0 chr5 162354538 162355106 -37275044 + L1HS LINE L1 3719 4286 -1860 * 745 284 81 44 chr5 162355494 162355814 -37274336 + L2 LINE L2 2873 3204 -109 188 333 16 0 chr5 162356160 162356223 -37273927 + L2 LINE L2 3184 3247 -25 2327 75 14 0 chr5 162356835 162357128 -37273022 - AluSq SINE Alu -16 297 1 475 318 51 20 chr5 162357629 162357824 -37272326 + MIR SINE MIR 62 262 0 440 285 103 0 chr5 162357839 162358004 -37272146 + L3 LINE CR1 1384 1565 -12 464 310 59 15 chr5 162358366 162358637 -37271513 - L3 LINE CR1 -156 1421 1139 364 344 53 22 chr5 162358813 162359040 -37271110 + L2 LINE L2 2140 2373 -941 * 478 292 0 22 chr5 162359017 162359154 -37270996 + MIR SINE MIR 102 235 -27 475 254 235 52 chr5 162359685 162359957 -37270193 + MER5C DNA MER1_type 3 324 0 220 340 47 0 chr5 162359957 162360039 -37270111 + MIR SINE MIR 30 116 -146 23 0 0 0 chr5 162360210 162360233 -37269917 + AT_rich Low_complexity Low_complexity 1 23 0 547 275 55 5 chr5 162360540 162360740 -37269410 - L2 LINE L2 -518 2796 2587 835 175 0 7 chr5 162362656 162362799 -37267351 + MER5B DNA MER1_type 1 142 -36 287 235 317 29 chr5 162362812 162363055 -37267095 + L2 LINE L2 1650 1962 -1352 2082 115 0 0 chr5 162363091 162363370 -37266780 - AluSx SINE Alu -19 293 15 469 187 0 0 chr5 162363461 162363552 -37266598 + L1MC4 LINE L1 7685 7775 -267 518 188 31 0 chr5 162363579 162363675 -37266475 - MER5A DNA MER1_type -90 99 1 1058 168 41 45 chr5 162363675 162363919 -37266231 + L1MC4 LINE L1 7800 8042 0 1236 280 148 34 chr5 162363957 162364571 -37265579 + L2 LINE L2 2186 2869 -445 320 77 231 0 chr5 162364589 162364641 -37265509 + MLT1E2 LTR MaLR 1 64 -562 23 0 0 0 chr5 162366316 162366339 -37263811 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 162366951 162366973 -37263177 + AT_rich Low_complexity Low_complexity 1 22 0 255 289 52 52 chr5 162367493 162367590 -37262560 - MIR3 SINE MIR -5 203 107 226 351 43 21 chr5 162367737 162367831 -37262319 - L3 LINE CR1 -115 1462 1367 377 339 66 11 chr5 162368378 162368561 -37261589 + MIR SINE MIR 20 212 -50 221 57 57 19 chr5 162368591 162368644 -37261506 + (CATAC)n Simple_repeat Simple_repeat 2 56 0 27 0 0 0 chr5 162368877 162368904 -37261246 + AT_rich Low_complexity Low_complexity 1 27 0 647 296 46 28 chr5 162370194 162370410 -37259740 + MIR SINE MIR 41 260 -2 389 279 26 10 chr5 162370540 162370745 -37259405 + L1MEc LINE L1 2155 2327 -3888 * 1063 235 143 14 chr5 162370726 162371280 -37258870 + L1MEc LINE L1 2921 3545 -2670 1149 281 96 52 chr5 162371519 162372233 -37257917 + L2 LINE L2 2461 3266 -47 2349 36 18 0 chr5 162372233 162372546 -37257604 + AluY SINE Alu 1 318 0 1149 281 96 52 chr5 162372546 162372590 -37257560 + L2 LINE L2 3266 3307 -6 1623 160 4 21 chr5 162373204 162373485 -37256665 - AluJb SINE Alu -36 276 1 24 0 0 0 chr5 162374082 162374106 -37256044 + AT_rich Low_complexity Low_complexity 1 24 0 2137 121 0 0 chr5 162374164 162374484 -37255666 + AluSx SINE Alu 1 320 0 243 0 0 0 chr5 162374721 162374748 -37255402 + (CAT)n Simple_repeat Simple_repeat 1 27 0 213 318 98 15 chr5 162374758 162374905 -37255245 - MER5A DNA MER1_type 0 178 26 197 371 71 21 chr5 162377337 162377477 -37252673 - L3 LINE CR1 -13 1564 1418 309 51 0 0 chr5 162377504 162377543 -37252607 + (TA)n Simple_repeat Simple_repeat 1 39 0 248 220 0 20 chr5 162377543 162377586 -37252564 + Alu SINE Alu 236 279 -23 321 84 42 0 chr5 162377600 162377671 -37252479 + (TA)n Simple_repeat Simple_repeat 1 74 0 4203 254 70 20 chr5 162377687 162378640 -37251510 + L1MB7 LINE L1 3181 4084 -2100 198 0 0 0 chr5 162378640 162378662 -37251488 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 4203 254 70 20 chr5 162378662 162380508 -37249642 + L1MB7 LINE L1 4084 6174 -10 31 68 0 0 chr5 162381008 162381067 -37249083 + AT_rich Low_complexity Low_complexity 1 59 0 592 317 56 23 chr5 162381078 162381321 -37248829 - L1MDa LINE L1 -3190 3350 3094 2676 23 7 3 chr5 162381321 162381631 -37248519 - AluY SINE Alu 0 311 1 592 317 56 23 chr5 162381631 162381690 -37248460 - L1MDa LINE L1 -3446 3094 3038 684 311 85 32 chr5 162381708 162382230 -37247920 - L1MDa LINE L1 -3558 2982 2435 351 279 114 61 chr5 162382462 162382759 -37247391 - L1MDa LINE L1 -4952 1578 1266 362 331 0 30 chr5 162383412 162383545 -37246605 + L2 LINE L2 2854 2982 -331 180 321 54 18 chr5 162383618 162383674 -37246476 + L2 LINE L2 3108 3165 -107 180 111 0 0 chr5 162383789 162383816 -37246334 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 298 231 176 8 chr5 162384222 162384353 -37245797 - MIR SINE MIR -65 143 43 706 240 108 10 chr5 162384530 162384734 -37245416 - MIR SINE MIR -32 230 7 214 191 40 56 chr5 162385565 162385691 -37244459 + (TATAA)n Simple_repeat Simple_repeat 1 124 0 308 245 0 75 chr5 162385694 162385788 -37244362 - L1MC4 LINE L1 -1339 6703 6617 244 64 43 0 chr5 162386049 162386096 -37244054 + (TA)n Simple_repeat Simple_repeat 2 50 0 1619 169 0 15 chr5 162386138 162386411 -37243739 - AluJo SINE Alu -39 273 5 23 0 0 0 chr5 162386595 162386618 -37243532 + AT_rich Low_complexity Low_complexity 1 23 0 330 328 48 0 chr5 162386618 162386743 -37243407 - MIR SINE MIR -32 230 100 264 30 0 0 chr5 162387455 162387488 -37242662 + (CA)n Simple_repeat Simple_repeat 2 34 0 1714 188 0 32 chr5 162387497 162387805 -37242345 - AluJo SINE Alu -14 298 1 2377 84 3 3 chr5 162388307 162388618 -37241532 - AluY SINE Alu 0 311 1 658 144 45 61 chr5 162388706 162388838 -37241312 + FLAM_C SINE Alu 2 131 -2 229 284 179 0 chr5 162388967 162389034 -37241116 + L2 LINE L2 3231 3309 -4 1645 219 50 64 chr5 162389581 162390078 -37240072 + MLT1D LTR MaLR 1 490 -15 2147 112 0 0 chr5 162391165 162391468 -37238682 + AluSg SINE Alu 2 304 0 753 238 14 61 chr5 162391624 162391636 -37238514 + MER58A DNA MER1_type 6 17 -2403 1162 220 53 0 chr5 162391636 162391863 -37238287 + MER8 DNA MER2_type 1 239 0 753 238 14 61 chr5 162391863 162392064 -37238086 + MER58A DNA MER1_type 17 209 -15 324 311 66 25 chr5 162392519 162392641 -37237509 - MIR3 SINE MIR -79 129 3 24 0 0 0 chr5 162393256 162393280 -37236870 + AT_rich Low_complexity Low_complexity 1 24 0 2011 148 14 0 chr5 162393360 162393657 -37236493 + AluSx SINE Alu 1 301 -11 987 253 14 0 chr5 162396207 162396428 -37233722 + MER58A DNA MER1_type 1 224 0 2287 113 0 0 chr5 162396779 162397088 -37233062 - AluSc SINE Alu 0 309 1 1798 215 26 56 chr5 162398002 162398467 -37231683 + MLT1D LTR MaLR 1 451 -54 276 111 0 0 chr5 162398475 162398520 -37231630 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 956 57 0 8 chr5 162398520 162398643 -37231507 - L1PA8 LINE L1 -24 6148 6027 619 85 43 0 chr5 162398705 162398799 -37231351 - L1PA8 LINE L1 -134 6038 5941 352 194 14 0 chr5 162398815 162398887 -37231263 + MLT1D LTR MaLR 433 505 0 389 363 90 5 chr5 162399239 162399451 -37230699 - MIR SINE MIR -19 243 14 831 291 98 14 chr5 162399475 162399760 -37230390 - L2 LINE L2 -376 2938 2630 208 211 35 26 chr5 162399917 162400031 -37230119 + (TA)n Simple_repeat Simple_repeat 2 116 0 203 192 14 55 chr5 162400648 162400721 -37229429 + CT-rich Low_complexity Low_complexity 1 70 0 21 0 0 0 chr5 162401160 162401181 -37228969 + AT_rich Low_complexity Low_complexity 1 21 0 211 231 0 39 chr5 162401973 162402025 -37228125 - MIR3 SINE MIR -9 199 150 517 250 96 0 chr5 162402037 162402193 -37227957 + MER113 DNA MER1_type? 288 458 -63 1547 167 14 54 chr5 162402848 162403162 -37226988 + AluJo SINE Alu 3 304 0 2168 114 0 25 chr5 162403557 162403873 -37226277 + AluSx SINE Alu 1 308 -4 2435 73 0 7 chr5 162404694 162404994 -37225156 - AluSg SINE Alu -12 298 1 638 168 187 89 chr5 162405295 162405509 -37224641 + MIR SINE MIR 2 236 -26 292 245 59 29 chr5 162406341 162406443 -37223707 + MIR SINE MIR 157 261 -1 233 359 34 8 chr5 162406742 162406859 -37223291 - L3 LINE CR1 -167 1410 1291 1801 159 29 46 chr5 162407083 162407497 -37222653 - L1MA7 LINE L1 -5 6286 5880 288 289 145 30 chr5 162408396 162408562 -37221588 - MIR SINE MIR -77 185 1 261 284 52 99 chr5 162408630 162408841 -37221309 - L3 LINE CR1 -151 1426 1226 313 330 76 27 chr5 162409690 162409875 -37220275 - L2 LINE L2 -543 2771 2578 21 36 0 0 chr5 162410078 162410106 -37220044 + AT_rich Low_complexity Low_complexity 1 28 0 407 292 13 28 chr5 162411421 162411607 -37218543 + MIR3 SINE MIR 20 203 -5 229 211 100 44 chr5 162411623 162411713 -37218437 + L1PA15-16 LINE L1 361 455 -6394 219 305 17 68 chr5 162412414 162412532 -37217618 + MIR SINE MIR 31 142 -66 259 311 97 0 chr5 162412908 162413011 -37217139 - MIR SINE MIR -63 145 33 422 345 127 13 chr5 162413638 162413867 -37216283 - L3 LINE CR1 -117 1460 1206 23 0 0 0 chr5 162414047 162414070 -37216080 + AT_rich Low_complexity Low_complexity 1 23 0 198 171 0 0 chr5 162415285 162415326 -37214824 + (TA)n Simple_repeat Simple_repeat 2 42 0 236 229 171 0 chr5 162415339 162415409 -37214741 + MIR SINE MIR 168 249 -13 526 219 0 58 chr5 162415788 162415925 -37214225 + MER69A DNA AcHobo 1 129 -48 219 278 0 0 chr5 162415931 162415985 -37214165 + (CCA)n Simple_repeat Simple_repeat 1 54 0 261 83 0 0 chr5 162416044 162416080 -37214070 + (TC)n Simple_repeat Simple_repeat 2 37 0 42 0 0 0 chr5 162416273 162416315 -37213835 + AT_rich Low_complexity Low_complexity 1 42 0 2003 158 0 0 chr5 162416435 162416727 -37213423 - AluSx SINE Alu -18 294 3 429 97 0 28 chr5 162416943 162417039 -37213111 - FLAM_C SINE Alu 0 167 74 581 229 8 0 chr5 162417634 162417752 -37212398 + FLAM_C SINE Alu 1 119 -24 1109 319 22 35 chr5 162419350 162419751 -37210399 + L2 LINE L2 2913 3308 -5 243 0 0 0 chr5 162419975 162420002 -37210148 + (TG)n Simple_repeat Simple_repeat 1 27 0 22 99 0 0 chr5 162421037 162421108 -37209042 + AT_rich Low_complexity Low_complexity 1 71 0 244 310 35 49 chr5 162422012 162422154 -37207996 - MIR3 SINE MIR -3 205 66 2037 104 14 3 chr5 162422892 162423180 -37206970 + AluSc SINE Alu 1 291 -18 390 91 0 0 chr5 162423185 162423240 -37206910 + (CA)n Simple_repeat Simple_repeat 2 56 0 467 298 79 22 chr5 162423472 162423650 -37206500 + MIR SINE MIR 22 209 -53 186 323 0 0 chr5 162423732 162423794 -37206356 + MIR3 SINE MIR 114 175 -33 1722 48 9 31 chr5 162425260 162425489 -37204661 + AluY SINE Alu 74 297 -14 180 77 0 0 chr5 162425533 162425559 -37204591 + (CA)n Simple_repeat Simple_repeat 1 26 0 31 92 0 0 chr5 162425596 162425683 -37204467 + AT_rich Low_complexity Low_complexity 1 87 0 2062 88 0 66 chr5 162425716 162426034 -37204116 - AluY SINE Alu -14 297 1 2330 84 0 3 chr5 162426555 162426853 -37203297 + AluY SINE Alu 1 297 -14 207 0 0 0 chr5 162426902 162426925 -37203225 + (TG)n Simple_repeat Simple_repeat 2 24 0 2212 67 0 67 chr5 162427000 162427316 -37202834 + AluY SINE Alu 1 295 -16 382 267 39 94 chr5 162427360 162427540 -37202610 - MIR SINE MIR -84 178 9 1841 176 17 52 chr5 162427593 162427997 -37202153 + MLT1B LTR MaLR 1 390 0 731 223 124 132 chr5 162428137 162428287 -37201863 - MER67A LTR ERV1 0 543 393 2168 143 31 8 chr5 162428287 162428643 -37201507 - THE1B LTR MaLR 0 364 1 10595 118 28 2 chr5 162428643 162430183 -37199967 - THE1B-int LTR MaLR 0 1580 1 2220 117 33 19 chr5 162430183 162430542 -37199608 - THE1B LTR MaLR 0 364 1 731 223 124 132 chr5 162430542 162430936 -37199214 - MER67A LTR ERV1 -147 396 1 255 400 0 0 chr5 162431552 162431662 -37198488 - MIR SINE MIR -123 139 30 319 345 9 0 chr5 162431895 162432005 -37198145 - L2 LINE L2 -13 3259 3149 276 391 9 0 chr5 162432409 162432524 -37197626 - MIR SINE MIR -111 151 36 262 326 114 38 chr5 162432720 162432904 -37197246 - MIR SINE MIR -7 255 58 2535 285 41 8 chr5 162433126 162433951 -37196199 + L1MEc LINE L1 20 871 -5525 677 259 8 78 chr5 162433972 162434227 -37195923 + L1MEc LINE L1 38 274 -6122 994 255 113 14 chr5 162434243 162434588 -37195562 + L1MEc LINE L1 594 972 -5424 898 268 72 79 chr5 162434622 162434957 -37195193 + L1MEc LINE L1 1052 1388 -5008 369 0 0 0 chr5 162434957 162434998 -37195152 + (TG)n Simple_repeat Simple_repeat 2 42 0 898 268 72 79 chr5 162434998 162435614 -37194536 + L1MEc LINE L1 1388 2194 -4202 1261 173 0 5 chr5 162435617 162435825 -37194325 + AluJb SINE Alu 86 292 -20 868 204 49 46 chr5 162436013 162436337 -37193813 + L1MEc LINE L1 2241 2565 -3650 184 395 61 0 chr5 162436509 162436623 -37193527 + L3 LINE CR1 1287 1407 -170 1273 122 0 0 chr5 162436739 162436911 -37193239 - AluSg/x SINE Alu -21 289 118 2067 70 0 21 chr5 162436918 162437205 -37192945 - L1PA8 LINE L1 -9 6163 5883 1425 66 0 0 chr5 162437205 162437388 -37192762 - L1PA7 LINE L1 -209 5945 5763 * 1600 71 5 0 chr5 162437374 162437586 -37192564 - L1PA7 LINE L1 -631 5523 5311 322 107 0 36 chr5 162437568 162437624 -37192526 + L1P4 LINE L1 5528 5581 -582 * 5252 55 5 5 chr5 162437611 162438381 -37191769 - L1PA7 LINE L1 -238 5916 5147 1294 255 19 50 chr5 162438381 162438856 -37191294 - L1M4 LINE L1 -2196 3950 3491 303 216 89 10 chr5 162439130 162439233 -37190917 + L1MD1 LINE L1 6128 7993 -2 2055 238 31 11 chr5 162439290 162439841 -37190309 + L1ME1 LINE L1 5600 6161 -5 225 282 65 8 chr5 162439934 162440058 -37190092 + L1ME4a LINE L1 5991 6121 0 204 365 0 42 chr5 162440093 162440189 -37189961 - MIR3 SINE MIR -24 184 93 959 238 25 8 chr5 162440341 162440576 -37189574 - MER8 DNA MER2_type 0 239 1 512 273 139 19 chr5 162440866 162441075 -37189075 + MIR SINE MIR 29 262 0 180 217 65 0 chr5 162441759 162441805 -37188345 + L2 LINE L2 3247 3295 -18 267 271 134 13 chr5 162441859 162442037 -37188113 + MIR SINE MIR 6 206 -56 294 268 129 63 chr5 162443011 162443178 -37186972 - MIR3 SINE MIR -14 194 14 988 190 44 34 chr5 162443339 162443544 -37186606 + MER20 DNA MER1_type 8 214 -5 2118 122 0 3 chr5 162443690 162443986 -37186164 - AluSg SINE Alu -15 295 1 205 233 33 0 chr5 162445887 162445947 -37184203 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 365 263 100 40 chr5 162446005 162446184 -37183966 + MIR3 SINE MIR 13 204 -4 202 342 61 44 chr5 162447234 162447348 -37182802 + MIR SINE MIR 7 122 -140 23 54 0 0 chr5 162447354 162447391 -37182759 + AT_rich Low_complexity Low_complexity 1 37 0 181 283 75 0 chr5 162447695 162447748 -37182402 + MIR SINE MIR 36 92 -170 206 278 0 37 chr5 162447797 162447851 -37182299 + L2 LINE L2 3197 3248 -24 500 284 77 0 chr5 162448129 162448284 -37181866 + MIR SINE MIR 2 168 -94 193 219 24 0 chr5 162448335 162448376 -37181774 - MIR SINE MIR -11 251 210 231 221 23 23 chr5 162448379 162448465 -37181685 + L1MC4 LINE L1 6617 6702 -1340 * 260 261 0 0 chr5 162448457 162448545 -37181605 - L1MC4 LINE L1 -1340 6702 6615 198 209 0 0 chr5 162448547 162448590 -37181560 + (TATATG)n Simple_repeat Simple_repeat 4 46 0 206 250 21 0 chr5 162448594 162448642 -37181508 + MIR SINE MIR 196 244 -18 231 36 0 0 chr5 162448642 162448670 -37181480 + (TTA)n Simple_repeat Simple_repeat 2 29 0 228 328 0 0 chr5 162448939 162449003 -37181147 + MIR SINE MIR 77 140 -68 26 88 0 0 chr5 162449029 162449097 -37181053 + AT_rich Low_complexity Low_complexity 1 68 0 578 348 106 44 chr5 162449287 162449984 -37180166 + L2 LINE L2 2494 3228 -85 583 291 186 0 chr5 162450392 162450612 -37179538 - MIR SINE MIR 0 262 2 1711 184 30 9 chr5 162450699 162451035 -37179115 - MER2 DNA MER2_type -1 343 1 1649 146 70 43 chr5 162451045 162451373 -37178777 - MER1B DNA MER1_type 0 337 1 760 253 62 17 chr5 162451703 162451944 -37178206 - MIR SINE MIR -2 260 9 305 288 0 14 chr5 162452305 162452378 -37177772 - MIR3 SINE MIR -21 187 116 1035 281 9 21 chr5 162452385 162452723 -37177427 + L1ME3 LINE L1 5829 6160 -2 226 211 0 0 chr5 162453066 162453104 -37177046 + L2 LINE L2 3220 3257 -15 21 0 0 0 chr5 162453127 162453148 -37177002 + AT_rich Low_complexity Low_complexity 1 21 0 2079 156 0 0 chr5 162453271 162453579 -37176571 + AluSx SINE Alu 1 308 -4 1280 223 91 95 chr5 162454212 162454889 -37175261 + L1MEc LINE L1 1827 2481 -3734 6621 36 0 6 chr5 162454889 162455695 -37174455 + L1PA4 LINE L1 5352 6152 -3 1280 223 91 95 chr5 162455695 162456103 -37174047 + L1MEc LINE L1 2481 2889 -3326 2079 129 0 13 chr5 162456239 162456542 -37173608 - AluSp SINE Alu -14 299 1 490 302 96 42 chr5 162456664 162457085 -37173065 + L1ME LINE L1 586 1023 -5057 2433 255 71 25 chr5 162457095 162458779 -37171371 + L1ME LINE L1 3969 5735 -361 276 174 0 0 chr5 162458779 162458825 -37171325 - Tigger4(Zombi) DNA MER2_type 0 2731 2686 23 54 0 0 chr5 162458825 162458862 -37171288 + AT_rich Low_complexity Low_complexity 1 37 0 446 333 136 41 chr5 162459194 162459584 -37170566 + L3 LINE CR1 1015 1441 -136 27 0 0 0 chr5 162460426 162460453 -37169697 + AT_rich Low_complexity Low_complexity 1 27 0 18808 24 0 0 chr5 162460915 162463157 -37166993 - L1PA3 LINE L1 -1473 4673 2433 7621 25 0 0 chr5 162463156 162464618 -37165532 + L1PA3 LINE L1 4674 6135 -20 * 385 303 0 28 chr5 162464639 162464748 -37165402 + MIR SINE MIR 20 125 -137 255 316 13 0 chr5 162464762 162464838 -37165312 + L2 LINE L2 3232 3308 -5 367 326 28 62 chr5 162465314 162465492 -37164658 + L2 LINE L2 2835 3006 -307 896 214 52 9 chr5 162465748 162465958 -37164192 + MER20 DNA MER1_type 1 219 0 209 276 211 24 chr5 162465984 162466107 -37164043 + L2 LINE L2 2598 2743 -571 204 267 105 35 chr5 162466159 162466245 -37163905 - MIR SINE MIR -87 175 84 425 333 38 50 chr5 162466399 162466660 -37163490 + L1ME LINE L1 5561 5818 -344 29 0 0 0 chr5 162466685 162466714 -37163436 + AT_rich Low_complexity Low_complexity 1 29 0 21 82 0 0 chr5 162466750 162466799 -37163351 + AT_rich Low_complexity Low_complexity 1 49 0 195 167 0 0 chr5 162467502 162467544 -37162606 + A-rich Low_complexity Low_complexity 1 42 0 405 73 0 0 chr5 162467547 162467602 -37162548 + Alu SINE Alu 1 55 -255 256 252 0 134 chr5 162467983 162468031 -37162119 - MIR3 SINE MIR -6 202 178 1611 130 126 0 chr5 162468031 162468292 -37161858 + AluSx SINE Alu 1 294 -18 256 252 0 134 chr5 162468292 162468362 -37161788 - MIR3 SINE MIR -30 178 100 186 281 72 92 chr5 162468377 162468530 -37161620 - L2 LINE L2 0 3313 3164 323 320 3 12 chr5 162468580 162468688 -37161462 + MER5A DNA MER1_type 63 166 -12 332 294 61 43 chr5 162468896 162469059 -37161091 - MIR SINE MIR -41 221 56 207 225 0 0 chr5 162469074 162469114 -37161036 + MIR3 SINE MIR 122 161 -47 604 291 117 19 chr5 162469968 162470089 -37160061 - MIR SINE MIR -25 237 129 1434 141 0 56 chr5 162470089 162470338 -37159812 - MER46A DNA MER2_type -1 235 1 604 291 117 19 chr5 162470338 162470429 -37159721 - MIR SINE MIR -133 129 4 229 322 73 45 chr5 162470648 162470820 -37159330 - MIR3 SINE MIR -28 180 36 569 242 6 45 chr5 162471499 162471656 -37158494 - MIR3 SINE MIR -25 183 33 193 343 29 0 chr5 162471923 162471993 -37158157 + L3 LINE CR1 1503 1574 -3 273 274 0 27 chr5 162472153 162472226 -37157924 + MIR SINE MIR 74 144 -64 280 217 0 35 chr5 162472346 162472461 -37157689 + (TATG)n Simple_repeat Simple_repeat 2 112 0 270 290 8 61 chr5 162473121 162473252 -37156898 - MIR SINE MIR -50 212 89 330 266 32 11 chr5 162473584 162473678 -37156472 - MLT1L LTR MaLR -42 573 478 241 311 107 0 chr5 162473842 162473945 -37156205 - MLT1L LTR MaLR -416 199 86 2109 91 0 44 chr5 162474153 162474476 -37155674 + AluSc SINE Alu 1 310 0 280 250 44 0 chr5 162474624 162474692 -37155458 - L2 LINE L2 0 3272 3202 549 241 85 40 chr5 162475190 162475389 -37154761 - MIR SINE MIR -32 230 23 459 305 39 8 chr5 162475391 162475519 -37154631 + MER5A DNA MER1_type 4 135 -54 210 239 51 77 chr5 162476184 162476301 -37153849 - MIR3 SINE MIR -9 199 86 2178 135 30 16 chr5 162476305 162476675 -37153475 + THE1C LTR MaLR 1 375 0 544 236 90 7 chr5 162476878 162477226 -37152924 - MER113 DNA MER1_type? -85 436 5 389 339 68 8 chr5 162477229 162477465 -37152685 + MIR SINE MIR 10 259 -3 953 230 139 18 chr5 162477677 162478059 -37152091 + Charlie4a DNA MER1_type 81 508 0 273 98 0 0 chr5 162478234 162478275 -37151875 + (A)n Simple_repeat Simple_repeat 1 41 0 1880 138 48 21 chr5 162478886 162479220 -37150930 - MER61A LTR ERV1 0 343 1 2403 99 29 3 chr5 162479220 162479565 -37150585 - MER61A-int LTR ERV1 0 5217 4864 * 18675 105 27 14 chr5 162479558 162482856 -37147294 - MER61A-int LTR ERV1 -391 6072 1320 3269 167 53 30 chr5 162482849 162483576 -37146574 - MER61A-int LTR ERV1 -4440 777 1 * 1797 166 54 18 chr5 162483576 162483907 -37146243 - MER61A LTR ERV1 0 343 1 195 383 28 19 chr5 162484016 162484123 -37146027 - MIR SINE MIR -111 151 44 183 293 40 27 chr5 162484144 162484219 -37145931 + L2 LINE L2 2651 2726 -588 29 0 0 0 chr5 162484429 162484458 -37145692 + AT_rich Low_complexity Low_complexity 1 29 0 263 318 46 100 chr5 162484588 162484937 -37145213 + L2 LINE L2 2942 3271 -1 189 74 0 0 chr5 162485027 162485054 -37145096 + (A)n Simple_repeat Simple_repeat 1 27 0 217 290 11 32 chr5 162485642 162485735 -37144415 + CT-rich Low_complexity Low_complexity 4 94 0 259 255 153 10 chr5 162486990 162487088 -37143062 + MIR SINE MIR 147 258 -4 956 218 81 0 chr5 162487208 162487405 -37142745 + MER58A DNA MER1_type 11 223 -1 3523 160 55 46 chr5 162488341 162489117 -37141033 + LTR1 LTR ERV1 3 785 0 24 0 0 0 chr5 162489888 162489912 -37140238 + AT_rich Low_complexity Low_complexity 1 24 0 464 232 28 42 chr5 162490103 162490245 -37139905 - L1MA10 LINE L1 -15 6319 6180 2453 235 40 23 chr5 162490254 162490902 -37139248 + L1ME1 LINE L1 5269 5927 -239 1055 232 63 16 chr5 162490998 162491317 -37138833 + MER93a LTR ERV1 67 400 -2 618 210 7 0 chr5 162491431 162491574 -37138576 + L1MA10 LINE L1 6188 6331 -3 217 146 0 24 chr5 162492364 162492405 -37137745 + (TTTTC)n Simple_repeat Simple_repeat 2 41 0 3766 172 35 27 chr5 162493614 162494429 -37135721 + L1MC2 LINE L1 5438 7720 -65 1953 136 0 14 chr5 162494441 162494768 -37135382 - AluSx SINE Alu 0 323 1 2658 172 27 36 chr5 162495021 162495608 -37134542 - L1MA10 LINE L1 -11 6323 5742 5557 190 42 13 chr5 162495609 162496849 -37133301 + L1 LINE L1 2933 4208 -1938 319 158 0 0 chr5 162496849 162496900 -37133250 + L1MC2 LINE L1 6280 6336 -8 431 18 18 0 chr5 162497021 162497077 -37133073 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 1854 135 26 35 chr5 162498559 162498871 -37131279 + AluJo SINE Alu 1 309 -3 223 301 21 21 chr5 162498926 162499019 -37131131 + MIR3 SINE MIR 115 207 -1 * 891 298 46 0 chr5 162499011 162499249 -37130901 + MIR SINE MIR 12 260 -2 784 224 9 66 chr5 162500196 162500424 -37129726 + MER20 DNA MER1_type 5 219 0 338 273 113 27 chr5 162500450 162500600 -37129550 + MIR SINE MIR 87 249 -13 327 333 60 0 chr5 162500687 162500855 -37129295 + L2 LINE L2 2212 2389 -925 296 340 102 55 chr5 162501108 162501597 -37128553 + L2 LINE L2 2461 2972 -342 316 315 71 24 chr5 162501621 162501748 -37128402 - L2 LINE L2 -6 3266 3134 505 242 133 0 chr5 162502048 162502168 -37127982 - MIR SINE MIR -42 220 85 249 267 33 56 chr5 162502383 162502563 -37127587 + L1ME4a LINE L1 5758 5933 -188 258 226 0 107 chr5 162503478 162503562 -37126588 + MIR SINE MIR 93 167 -95 198 0 0 0 chr5 162503638 162503660 -37126490 + (ATG)n Simple_repeat Simple_repeat 3 24 0 * 256 162 15 15 chr5 162503658 162503726 -37126424 + GA-rich Low_complexity Low_complexity 1 68 0 249 278 113 43 chr5 162503770 162503885 -37126265 + L2 LINE L2 3191 3313 0 244 367 0 28 chr5 162504703 162504812 -37125338 - MER5A DNA MER1_type -15 174 69 214 119 24 24 chr5 162504812 162504854 -37125296 + CT-rich Low_complexity Low_complexity 4 45 0 234 398 39 39 chr5 162504891 162505019 -37125131 - L3 LINE CR1 -18 1559 1432 318 274 95 71 chr5 162505275 162505443 -37124707 + L3 LINE CR1 1395 1566 -11 22 0 0 0 chr5 162506019 162506041 -37124109 + AT_rich Low_complexity Low_complexity 1 22 0 1995 256 49 20 chr5 162506531 162507167 -37122983 + MLT1E1 LTR MaLR 1 654 0 1824 165 3 7 chr5 162507821 162508112 -37122038 + AluSx SINE Alu 6 295 -17 21 36 0 0 chr5 162508224 162508252 -37121898 + AT_rich Low_complexity Low_complexity 1 28 0 23 68 0 0 chr5 162508776 162508820 -37121330 + AT_rich Low_complexity Low_complexity 1 44 0 318 205 107 41 chr5 162508925 162509047 -37121103 + L1MC4 LINE L1 6620 6749 -1293 216 245 19 0 chr5 162509325 162509378 -37120772 + MIR SINE MIR 96 149 -113 351 0 0 0 chr5 162509661 162509700 -37120450 + (TC)n Simple_repeat Simple_repeat 2 40 0 543 312 138 0 chr5 162509830 162510048 -37120102 + MIR SINE MIR 15 262 0 663 183 8 8 chr5 162510074 162510200 -37119950 + FLAM_C SINE Alu 9 134 -9 196 255 21 0 chr5 162561374 162561421 -37068729 + L2 LINE L2 3216 3263 -9 198 222 0 0 chr5 162561839 162561893 -37068257 + (TA)n Simple_repeat Simple_repeat 2 55 0 278 81 0 0 chr5 162561906 162561943 -37068207 - MADE1 DNA Mariner -35 45 9 329 313 104 8 chr5 162562445 162562579 -37067571 + MIR SINE MIR 15 161 -101 194 339 71 18 chr5 162562781 162562893 -37067257 - MIR3 SINE MIR -25 183 66 21 82 0 0 chr5 162563582 162563631 -37066519 + AT_rich Low_complexity Low_complexity 1 49 0 278 366 43 36 chr5 162564047 162564326 -37065824 - L2 LINE L2 -564 2750 2470 245 143 0 20 chr5 162564767 162564816 -37065334 + (GAAAA)n Simple_repeat Simple_repeat 3 50 0 22 0 0 0 chr5 162565059 162565081 -37065069 + AT_rich Low_complexity Low_complexity 1 22 0 220 332 139 15 chr5 162565424 162565683 -37064467 + L3 LINE CR1 869 1159 -418 204 40 0 0 chr5 162566006 162566031 -37064119 + (TG)n Simple_repeat Simple_repeat 2 26 0 1484 211 13 67 chr5 162566282 162566656 -37063494 - MLT1A2 LTR MaLR -20 354 1 24 0 0 0 chr5 162566671 162566695 -37063455 + AT_rich Low_complexity Low_complexity 1 24 0 320 195 86 174 chr5 162566695 162567034 -37063116 + L1MEc LINE L1 1937 2245 -4151 804 235 14 38 chr5 162567037 162567076 -37063074 - MLT2D LTR ERVL 0 414 376 459 0 0 0 chr5 162567076 162567127 -37063023 + (TG)n Simple_repeat Simple_repeat 1 51 0 804 235 14 38 chr5 162567127 162567300 -37062850 - MLT2D LTR ERVL -38 376 207 473 59 29 0 chr5 162567306 162567374 -37062776 - MSTC LTR MaLR -4 424 355 8214 203 27 11 chr5 162567374 162568427 -37061723 + L1PA13 LINE L1 156 1191 -5606 2373 47 47 10 chr5 162568427 162568727 -37061423 + AluY SINE Alu 1 311 0 8214 203 27 11 chr5 162568727 162570995 -37059155 + L1PA13 LINE L1 1191 3980 -2817 1637 193 18 3 chr5 162571007 162571333 -37058817 + L1PA13 LINE L1 4377 4707 -2090 * 3833 92 9 21 chr5 162571327 162571843 -37058307 - L1PA10 LINE L1 -326 5842 5332 2151 113 3 3 chr5 162571843 162572135 -37058015 - AluSg SINE Alu -18 292 1 3833 92 9 21 chr5 162572135 162572184 -37057966 - L1PA10 LINE L1 -836 5332 5284 24 53 0 0 chr5 162572629 162572667 -37057483 + AT_rich Low_complexity Low_complexity 1 38 0 2814 10 0 0 chr5 162572954 162573261 -37056889 + AluY SINE Alu 1 307 -4 24 32 0 0 chr5 162573456 162573487 -37056663 + AT_rich Low_complexity Low_complexity 1 31 0 1816 210 48 0 chr5 162573617 162573989 -37056161 - MLT1B LTR MaLR 0 390 1 2269 107 3 0 chr5 162574189 162574489 -37055661 + AluSp SINE Alu 1 301 -12 21 71 0 0 chr5 162574720 162574762 -37055388 + AT_rich Low_complexity Low_complexity 1 42 0 26 30 0 0 chr5 162574781 162574814 -37055336 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 162574921 162574951 -37055199 + AT_rich Low_complexity Low_complexity 1 30 0 2059 141 10 13 chr5 162575184 162575497 -37054653 + AluSx SINE Alu 1 312 0 221 328 94 0 chr5 162575589 162575653 -37054497 - L2 LINE L2 -40 3232 3163 1829 149 152 34 chr5 162576172 162576554 -37053596 - MSTA LTR MaLR -1 427 1 4314 148 33 17 chr5 162576554 162577378 -37052772 - MSTA-int LTR MaLR 0 1580 12 31 68 0 0 chr5 162577606 162577665 -37052485 + AT_rich Low_complexity Low_complexity 1 59 0 2163 123 21 51 chr5 162578065 162578440 -37051710 + THE1B LTR MaLR 1 364 0 1361 193 75 44 chr5 162578576 162579162 -37050988 - MER67C LTR ERV1 -8 506 1 323 315 0 18 chr5 162580124 162580235 -37049915 + L2 LINE L2 3168 3276 -37 184 341 78 18 chr5 162580453 162580620 -37049530 - MIR SINE MIR -6 256 80 24 0 0 0 chr5 162580869 162580893 -37049257 + AT_rich Low_complexity Low_complexity 1 24 0 522 310 107 17 chr5 162580931 162581276 -37048874 + L1ME4a LINE L1 5706 6081 -40 183 80 0 0 chr5 162583330 162583355 -37046795 + (TA)n Simple_repeat Simple_repeat 2 26 0 270 56 0 0 chr5 162583386 162583422 -37046728 + (TA)n Simple_repeat Simple_repeat 1 36 0 371 222 26 20 chr5 162583496 162583649 -37046501 + (CATATA)n Simple_repeat Simple_repeat 3 156 0 200 220 60 40 chr5 162584717 162584767 -37045383 - L2 LINE L2 -88 3184 3134 405 359 144 0 chr5 162585395 162585693 -37044457 - L2 LINE L2 -5 3308 2968 262 300 67 53 chr5 162585933 162586083 -37044067 - L2 LINE L2 0 3313 3162 199 424 24 6 chr5 162586317 162586482 -37043668 - L2 LINE L2 -448 2866 2699 257 317 30 10 chr5 162587294 162587395 -37042755 + MIR3 SINE MIR 93 195 -13 278 250 26 0 chr5 162588572 162588648 -37041502 - L1MEc LINE L1 -5257 1139 1062 573 318 163 20 chr5 162588657 162589100 -37041050 - L1MEc LINE L1 -5854 542 37 329 307 0 0 chr5 162589764 162589852 -37040298 - L1MC4 LINE L1 -1340 6702 6615 246 174 0 0 chr5 162589852 162589898 -37040252 + (CA)n Simple_repeat Simple_repeat 1 46 0 1778 147 23 55 chr5 162589899 162590246 -37039904 - L1MA10 LINE L1 -57 6277 5942 197 65 32 0 chr5 162590246 162590277 -37039873 + (TTTTA)n Simple_repeat Simple_repeat 1 32 0 5563 104 11 0 chr5 162590277 162591071 -37039079 - L1PA8 LINE L1 -24 6148 5346 222 317 47 13 chr5 162591613 162591698 -37038452 + MIR SINE MIR 62 148 -65 1620 174 25 50 chr5 162592079 162592475 -37037675 - L1MA7 LINE L1 0 6291 5906 762 174 12 31 chr5 162592470 162592631 -37037519 - L1 LINE L1 -2041 4105 3948 * 5193 174 27 23 chr5 162592625 162594339 -37035811 - L1MA7 LINE L1 -391 5900 4178 2834 217 8 37 chr5 162594441 162595147 -37035003 - L1MA9 LINE L1 -153 6159 5474 405 167 0 0 chr5 162595148 162595226 -37034924 + (TA)n Simple_repeat Simple_repeat 1 78 0 1582 161 3 48 chr5 162595226 162595518 -37034632 - AluJb SINE Alu -27 285 7 1057 224 35 8 chr5 162595525 162595784 -37034366 - L1MA9 LINE L1 -871 5275 5010 5517 217 69 14 chr5 162595838 162596211 -37033939 + L1 LINE L1 3390 3741 -2405 2139 89 3 0 chr5 162596211 162596502 -37033648 + AluSc SINE Alu 6 297 -12 5517 217 69 14 chr5 162596502 162597664 -37032486 + L1 LINE L1 3741 5009 -1137 1101 196 0 25 chr5 162597771 162598011 -37032139 - MER46A DNA MER2_type -2 234 1 304 330 38 24 chr5 162598878 162599046 -37031104 + MIR SINE MIR 42 212 -50 476 276 147 0 chr5 162599497 162599667 -37030483 + L2 LINE L2 1352 1546 -1768 2865 262 26 50 chr5 162599686 162601004 -37029146 + L1M4 LINE L1 3031 4316 -1830 1325 148 108 20 chr5 162601054 162601359 -37028791 - L1MA7 LINE L1 0 6291 5960 2137 253 114 12 chr5 162601359 162602317 -37027833 + L1M4 LINE L1 4317 5378 -775 416 278 66 5 chr5 162602377 162602560 -37027590 - MLT1G LTR MaLR -353 202 1 365 351 27 11 chr5 162603935 162604120 -37026030 + MLT1J2 LTR MaLR 263 450 0 2157 96 0 40 chr5 162604434 162604756 -37025394 + AluSx SINE Alu 1 309 -3 805 173 0 0 chr5 162606235 162606362 -37023788 + FLAM_C SINE Alu 1 127 -16 27 0 0 0 chr5 162606369 162606396 -37023754 + AT_rich Low_complexity Low_complexity 1 27 0 2247 90 0 10 chr5 162606715 162607015 -37023135 + AluSq SINE Alu 1 297 -16 1941 165 10 35 chr5 162607016 162607415 -37022735 - L1MB3 LINE L1 -2 6181 5793 754 199 6 48 chr5 162607481 162607647 -37022503 - L1MB3 LINE L1 -379 5792 5634 2026 127 0 36 chr5 162607660 162607968 -37022182 - AluSx SINE Alu -13 299 3 26 50 0 0 chr5 162608004 162608044 -37022106 + AT_rich Low_complexity Low_complexity 1 40 0 254 341 72 29 chr5 162608082 162608220 -37021930 + L3 LINE CR1 745 888 -689 447 347 201 3 chr5 162608226 162608514 -37021636 - L3 LINE CR1 -893 684 340 290 228 215 38 chr5 162609514 162609672 -37020478 - MER102b DNA MER1_type 0 341 156 1988 163 0 6 chr5 162609679 162609992 -37020158 - AluSx SINE Alu -1 311 1 340 316 78 26 chr5 162610344 162610537 -37019613 + L3 LINE CR1 275 477 -1100 414 254 46 23 chr5 162610575 162610705 -37019445 + L3 LINE CR1 643 775 -802 270 318 85 58 chr5 162610735 162610924 -37019226 - MIR3 SINE MIR -6 202 9 258 357 71 0 chr5 162611203 162611315 -37018835 - L2 LINE L2 -2 3311 3192 29 70 0 0 chr5 162612553 162612610 -37017540 + AT_rich Low_complexity Low_complexity 1 57 0 203 246 0 58 chr5 162613629 162613698 -37016452 + GA-rich Low_complexity Low_complexity 2 66 0 2377 97 0 0 chr5 162614221 162614531 -37015619 + AluSg SINE Alu 1 310 0 238 263 0 0 chr5 162615371 162615428 -37014722 + (ATG)n Simple_repeat Simple_repeat 2 58 0 387 307 131 0 chr5 162615441 162615617 -37014533 - MIR SINE MIR -13 249 51 252 354 95 7 chr5 162616040 162616187 -37013963 + MIR3 SINE MIR 45 204 -4 339 320 142 18 chr5 162616609 162616834 -37013316 + MIR SINE MIR 10 262 0 255 346 244 26 chr5 162617742 162617898 -37012252 - MIR3 SINE MIR -8 200 11 219 170 0 0 chr5 162617969 162618016 -37012134 + A-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr5 162618370 162618391 -37011759 + AT_rich Low_complexity Low_complexity 1 21 0 502 286 101 25 chr5 162618396 162618595 -37011555 + MIR SINE MIR 45 258 -4 297 143 0 36 chr5 162619067 162619123 -37011027 + HsTC2 DNA Tc2 30 83 -1815 207 0 0 0 chr5 162619124 162619147 -37011003 + (TG)n Simple_repeat Simple_repeat 2 24 0 1743 106 12 0 chr5 162619651 162619896 -37010254 + AluSq SINE Alu 1 248 -65 254 352 41 21 chr5 162619961 162620106 -37010044 - MER5A DNA MER1_type -7 182 35 383 327 24 30 chr5 162620156 162620324 -37009826 + MIR3 SINE MIR 22 188 -20 192 248 90 83 chr5 162621292 162621425 -37008725 - MIR3 SINE MIR -39 169 36 195 222 0 0 chr5 162622052 162622097 -37008053 + (TA)n Simple_repeat Simple_repeat 2 46 0 244 326 22 0 chr5 162622105 162622194 -37007956 + L1MC4 LINE L1 6615 6705 -1337 232 250 0 0 chr5 162622196 162622248 -37007902 + (TATG)n Simple_repeat Simple_repeat 4 55 0 323 269 0 11 chr5 162622249 162622424 -37007726 + (TATATG)n Simple_repeat Simple_repeat 6 178 0 354 291 0 0 chr5 162622432 162622604 -37007546 + (TA)n Simple_repeat Simple_repeat 2 173 0 249 330 21 21 chr5 162623695 162623792 -37006358 - MIR SINE MIR -76 132 36 368 338 34 0 chr5 162624266 162624414 -37005736 - MER117 DNA MER1_type -17 180 28 515 243 0 0 chr5 162624469 162624572 -37005578 + FLAM_A SINE Alu 18 120 -22 31 26 0 0 chr5 162624575 162624613 -37005537 + AT_rich Low_complexity Low_complexity 1 38 0 608 71 65 12 chr5 162624613 162624783 -37005367 + (TA)n Simple_repeat Simple_repeat 2 180 0 257 103 60 26 chr5 162624794 162624910 -37005240 + (TA)n Simple_repeat Simple_repeat 1 120 0 183 136 15 30 chr5 162624936 162625002 -37005148 + (TA)n Simple_repeat Simple_repeat 2 66 0 356 212 0 56 chr5 162625018 162625197 -37004953 + (TA)n Simple_repeat Simple_repeat 1 169 0 2005 74 57 10 chr5 162625305 162625601 -37004549 - AluY SINE Alu -1 310 1 21 36 0 0 chr5 162626403 162626431 -37003719 + AT_rich Low_complexity Low_complexity 1 28 0 297 399 39 0 chr5 162627288 162627441 -37002709 + MIR3 SINE MIR 6 164 -44 646 295 86 70 chr5 162627986 162628528 -37001622 - L2 LINE L2 -11 3302 2756 580 294 55 10 chr5 162628784 162628985 -37001165 + MIR SINE MIR 4 213 -49 1913 158 0 7 chr5 162629332 162629630 -37000520 - AluSx SINE Alu -16 296 1 6779 68 3 2 chr5 162630092 162631386 -36998764 + L1PA7 LINE L1 4856 6150 -4 258 32 0 0 chr5 162631802 162631833 -36998317 + (CA)n Simple_repeat Simple_repeat 2 32 0 403 252 31 16 chr5 162632521 162632648 -36997502 - L1M4 LINE L1 -1562 4584 4456 4575 236 50 12 chr5 162633901 162635291 -36994859 - L1M4 LINE L1 -1683 4463 3022 346 245 39 0 chr5 162635830 162635932 -36994218 + L1MC4 LINE L1 6598 6703 -1339 3645 146 50 22 chr5 162636824 162637502 -36992648 - L1PB4 LINE L1 -13 6143 5447 1444 152 21 43 chr5 162637502 162638064 -36992086 - L1P5 LINE L1 -632 5524 4971 221 224 35 47 chr5 162638862 162638947 -36991203 + GA-rich Low_complexity Low_complexity 2 85 0 787 355 61 28 chr5 162639061 162639554 -36990596 + LTR33 LTR ERVL 6 514 -7 23 0 0 0 chr5 162640352 162640375 -36989775 + AT_rich Low_complexity Low_complexity 1 23 0 2153 246 102 42 chr5 162640613 162641708 -36988442 + L1MEc LINE L1 49 1234 -5162 210 267 188 0 chr5 162642218 162642319 -36987831 + L2 LINE L2 3193 3312 -1 407 310 127 28 chr5 162642466 162642750 -36987400 - L2 LINE L2 -128 3185 2874 293 82 20 0 chr5 162644050 162644099 -36986051 + (GA)n Simple_repeat Simple_repeat 2 51 0 41956 38 29 2 chr5 162644817 162650805 -36979345 + L1PA3 LINE L1 4 6155 0 30 0 0 0 chr5 162650851 162650881 -36979269 + AT_rich Low_complexity Low_complexity 1 30 0 1949 150 61 9 chr5 162650956 162651302 -36978848 - THE1B LTR MaLR 0 364 1 329 241 0 9 chr5 162651385 162651493 -36978657 + (TATG)n Simple_repeat Simple_repeat 4 110 0 207 374 12 12 chr5 162651736 162651819 -36978331 - L3 LINE CR1 -5 1572 1490 350 324 76 33 chr5 162651833 162652108 -36978042 - L3 LINE CR1 -230 1347 1061 275 211 0 18 chr5 162652114 162652171 -36977979 - L3 LINE CR1 -637 940 885 214 373 52 13 chr5 162653709 162653862 -36976288 - L2 LINE L2 -557 2757 2599 571 315 14 25 chr5 162654287 162654573 -36975577 + L1MC4a LINE L1 5642 5924 -1884 188 289 144 19 chr5 162655137 162655241 -36974909 + L2 LINE L2 3126 3242 -71 31 44 0 0 chr5 162655258 162655303 -36974847 + AT_rich Low_complexity Low_complexity 1 45 0 180 111 0 0 chr5 162655739 162655766 -36974384 + (A)n Simple_repeat Simple_repeat 1 27 0 22 70 0 0 chr5 162656596 162656639 -36973511 + AT_rich Low_complexity Low_complexity 1 43 0 180 374 81 37 chr5 162658143 162658389 -36971761 + L2 LINE L2 2646 2902 -412 232 280 40 13 chr5 162658492 162658567 -36971583 + L2 LINE L2 3196 3272 0 13204 193 19 25 chr5 162659456 162662471 -36967679 - L1 LINE L1 -909 6656 3197 1880 152 3 34 chr5 162662471 162662793 -36967357 - AluSx SINE Alu 0 312 1 13204 193 19 25 chr5 162662793 162662942 -36967208 - L1 LINE L1 -4368 3197 3049 510 165 0 11 chr5 162662941 162663032 -36967118 - L1MB7 LINE L1 -276 5908 5819 * 789 221 55 11 chr5 162663110 162663291 -36966859 - L1M4b LINE L1 -6655 204 16 398 276 53 0 chr5 162663291 162663443 -36966707 - L1MB7 LINE L1 -729 5441 5282 296 209 12 0 chr5 162664662 162664748 -36965402 + (TA)n Simple_repeat Simple_repeat 1 87 0 21 57 0 0 chr5 162664778 162664813 -36965337 + AT_rich Low_complexity Low_complexity 1 35 0 4471 126 18 7 chr5 162665220 162666070 -36964080 - L1PA14 LINE L1 -208 7391 6535 403 254 0 36 chr5 162666205 162666315 -36963835 - L1PA14 LINE L1 -1027 6557 6452 11431 28 0 0 chr5 162666316 162668432 -36961718 - L1PA2 LINE L1 -2 6153 4037 6204 40 1 0 chr5 162668432 162669200 -36960950 + L1PA2 LINE L1 3276 4044 -2102 * 15020 221 21 16 chr5 162669196 162673055 -36957095 - L1PA14 LINE L1 -1123 6461 2586 3438 244 20 44 chr5 162673115 162674123 -36956027 - L1PA14 LINE L1 -5874 1707 1 26 50 0 0 chr5 162674764 162674804 -36955346 + AT_rich Low_complexity Low_complexity 1 40 0 240 35 0 0 chr5 162675041 162675070 -36955080 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 964 98 0 0 chr5 162675072 162675195 -36954955 - AluSp/q SINE Alu -24 289 167 646 144 18 0 chr5 162675437 162675548 -36954602 + MER49 LTR ERV1 182 294 -629 1356 235 17 17 chr5 162675583 162675928 -36954222 + MER4D LTR ERV1 549 893 -10 405 366 45 12 chr5 162676111 162676357 -36953793 - MIR SINE MIR -1 261 8 390 235 82 71 chr5 162676584 162676754 -36953396 - MIR3 SINE MIR -6 202 31 292 242 0 16 chr5 162676768 162676830 -36953320 + MER31-int LTR ERV1 596 656 -6145 304 242 121 47 chr5 162676901 162677050 -36953100 + MER31-int LTR ERV1 1346 1505 -4826 518 218 5 114 chr5 162677097 162677290 -36952860 + MER31-int LTR ERV1 263 434 -4502 1923 226 42 48 chr5 162677374 162677695 -36952455 + MER31-int LTR ERV1 863 1185 -3751 2217 98 0 7 chr5 162677695 162677990 -36952160 - AluSc SINE Alu -16 293 1 1923 226 42 48 chr5 162677990 162678020 -36952130 + MER31-int LTR ERV1 1185 1214 -3722 2032 123 47 49 chr5 162678020 162678385 -36951765 - THE1B LTR MaLR 0 364 1 1923 226 42 48 chr5 162678385 162678673 -36951477 + MER31-int LTR ERV1 1214 1499 -3437 5884 175 66 15 chr5 162678731 162679052 -36951098 + L1 LINE L1 4022 4325 -1821 844 200 167 61 chr5 162679052 162679382 -36950768 + MLT1A1 LTR MaLR 1 365 0 5884 175 66 15 chr5 162679382 162680166 -36949984 + L1 LINE L1 4325 5207 -939 217 0 61 0 chr5 162680166 162680199 -36949951 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 5884 175 66 15 chr5 162680199 162680402 -36949748 + L1 LINE L1 5207 5398 -748 861 229 108 34 chr5 162680402 162680790 -36949360 + MER31-int LTR ERV1 1752 2168 -2768 250 336 0 92 chr5 162681292 162681423 -36948727 - L2 LINE L2 -18 3295 3177 261 0 0 0 chr5 162681487 162681516 -36948634 + (T)n Simple_repeat Simple_repeat 1 29 0 284 330 0 0 chr5 162681735 162681826 -36948324 + MIR SINE MIR 116 206 -56 234 62 0 0 chr5 162682664 162682696 -36947454 + (CA)n Simple_repeat Simple_repeat 1 32 0 2417 184 97 0 chr5 162684835 162685291 -36944859 + MLT1D LTR MaLR 6 505 0 27 62 0 0 chr5 162685788 162685836 -36944314 + AT_rich Low_complexity Low_complexity 1 48 0 2175 56 70 0 chr5 162685851 162686136 -36944014 - AluY SINE Alu -6 305 1 593 268 40 86 chr5 162686184 162686535 -36943615 - L1ME3A LINE L1 -271 5899 5565 29 28 0 0 chr5 162686564 162686600 -36943550 + AT_rich Low_complexity Low_complexity 1 36 0 350 243 17 121 chr5 162686660 162686833 -36943317 - L1ME3A LINE L1 -1217 4929 4775 327 326 62 10 chr5 162686929 162687122 -36943028 + L1MC4a LINE L1 6217 6419 -1389 * 573 237 41 61 chr5 162687121 162687435 -36942715 - L1MC/D LINE L1 -2197 5611 5264 315 258 11 34 chr5 162687583 162687714 -36942436 - L1MC/D LINE L1 -1103 5043 4921 22 56 0 0 chr5 162688274 162688310 -36941840 + AT_rich Low_complexity Low_complexity 1 36 0 1622 176 11 4 chr5 162688679 162688958 -36941192 + AluJo SINE Alu 1 281 -31 25 31 0 0 chr5 162689066 162689098 -36941052 + AT_rich Low_complexity Low_complexity 1 32 0 29666 113 13 60 chr5 162689221 162689873 -36940277 - L1PA7 LINE L1 -22 6132 5451 2423 66 7 7 chr5 162689873 162690176 -36939974 - AluY SINE Alu -8 303 1 29666 113 13 60 chr5 162690176 162695958 -36934192 - L1PA7 LINE L1 -703 5451 9 2318 198 24 55 chr5 162697122 162697667 -36932483 - MER77 LTR ERV1 -2 603 76 608 159 25 6 chr5 162698304 162698461 -36931689 + CT-rich Low_complexity Low_complexity 3 162 0 365 123 15 0 chr5 162698511 162698576 -36931574 + CT-rich Low_complexity Low_complexity 3 68 0 237 274 48 0 chr5 162699426 162699488 -36930662 + Charlie8 DNA MER1_type 1353 1417 -1000 285 294 28 46 chr5 162700817 162700926 -36929224 + MIR SINE MIR 19 125 -83 383 269 45 50 chr5 162701482 162701683 -36928467 + MLT1K LTR MaLR 333 532 -56 1147 135 5 5 chr5 162701903 162702096 -36928054 + L1 LINE L1 3986 4178 -1968 219 388 96 21 chr5 162702411 162702795 -36927355 + L2 LINE L2 325 737 -2577 201 132 0 0 chr5 162703340 162703378 -36926772 + (TA)n Simple_repeat Simple_repeat 2 39 0 245 229 29 29 chr5 162703721 162703791 -36926359 - MIR SINE MIR -28 234 165 2476 110 43 17 chr5 162704383 162704800 -36925350 - MSTA LTR MaLR 0 428 1 413 364 26 15 chr5 162705780 162705975 -36924175 - MIR SINE MIR -31 231 35 265 224 104 0 chr5 162706295 162706362 -36923788 + MER5A DNA MER1_type 39 112 -77 459 293 14 50 chr5 162706576 162706716 -36923434 + MIR SINE MIR 7 141 -121 201 205 24 24 chr5 162706757 162706840 -36923310 + (TTA)n Simple_repeat Simple_repeat 2 84 0 428 215 139 6 chr5 162707301 162707473 -36922677 - MER5C DNA MER1_type -6 318 124 2452 32 6 45 chr5 162709129 162709442 -36920708 - AluY SINE Alu -10 301 1 34 89 0 0 chr5 162709761 162709851 -36920299 + AT_rich Low_complexity Low_complexity 1 90 0 317 253 55 41 chr5 162709899 162710056 -36920094 + MER63 DNA MER1_type 676 1686 -2 385 222 111 0 chr5 162710144 162710279 -36919871 + L1M4 LINE L1 5183 5332 -814 1109 75 6 0 chr5 162710279 162710440 -36919710 + LTR43 LTR ERV1 441 602 0 189 0 0 0 chr5 162710811 162710832 -36919318 + (CAA)n Simple_repeat Simple_repeat 1 21 0 338 279 99 0 chr5 162710834 162710945 -36919205 + MIR SINE MIR 66 187 -75 657 148 0 9 chr5 162711669 162711784 -36918366 - MSTB LTR MaLR -11 415 302 1058 234 142 44 chr5 162713270 162713680 -36916470 - MER77 LTR ERV1 -4 601 175 2386 97 0 3 chr5 162714151 162714461 -36915689 + AluSg SINE Alu 1 309 -1 4458 157 35 2 chr5 162715006 162715843 -36914307 + Tigger1 DNA MER2_type 1555 2418 0 301 336 122 35 chr5 162715906 162716340 -36913810 - L3 LINE CR1 0 1577 1106 405 255 43 77 chr5 162716830 162717038 -36913112 - L2 LINE L2 0 3313 3113 650 284 83 43 chr5 162717399 162717747 -36912403 + L2 LINE L2 2940 3301 -12 437 352 52 20 chr5 162717819 162718069 -36912081 + L3 LINE CR1 1167 1424 -153 278 275 27 27 chr5 162718186 162718335 -36911815 + MER103 DNA DNA 16 164 -2 1041 122 12 0 chr5 162718669 162718833 -36911317 - MER57A LTR ERV1 -237 166 1 1202 208 61 22 chr5 162718838 162719151 -36910999 + MLT1B LTR MaLR 66 390 0 21 0 0 0 chr5 162719215 162719236 -36910914 + AT_rich Low_complexity Low_complexity 1 21 0 1001 205 22 50 chr5 162719237 162719559 -36910591 - L1MA8 LINE L1 -2 6289 5977 1155 205 36 18 chr5 162719560 162719838 -36910312 - L1M3e LINE L1 -6741 289 7 231 88 0 0 chr5 162719885 162719919 -36910231 + (TG)n Simple_repeat Simple_repeat 1 34 0 23 0 0 0 chr5 162721325 162721348 -36908802 + AT_rich Low_complexity Low_complexity 1 23 0 455 138 0 0 chr5 162721362 162721427 -36908723 + MER75B DNA T2_type 2 66 -177 2095 119 143 13 chr5 162721462 162721841 -36908309 - MSTA LTR MaLR 0 428 1 1320 69 27 0 chr5 162722398 162722586 -36907564 + MER75B DNA T2_type 51 243 0 295 323 18 50 chr5 162723913 162724040 -36906110 + MIR SINE MIR 61 183 -61 1930 176 28 48 chr5 162724177 162724614 -36905536 + Tigger2a DNA MER2_type 1 428 -6 337 348 73 0 chr5 162724659 162724837 -36905313 - MIR SINE MIR -70 192 2 2303 122 33 28 chr5 162725329 162725691 -36904459 - THE1B LTR MaLR 0 364 1 380 315 61 6 chr5 162725837 162726018 -36904132 + MLT1I LTR MaLR 217 407 -2 485 322 75 5 chr5 162727836 162728035 -36902115 + MIR SINE MIR 40 252 -10 449 181 63 18 chr5 162729682 162729811 -36900339 + MIR3 SINE MIR 66 197 -11 289 115 16 16 chr5 162730279 162730340 -36899810 + (CA)n Simple_repeat Simple_repeat 2 62 0 694 324 65 51 chr5 162730504 162731016 -36899134 - L3 LINE CR1 -75 1502 984 182 326 11 45 chr5 162731256 162731345 -36898805 - L2 LINE L2 -176 3096 3011 12011 31 5 0 chr5 162731984 162734194 -36895956 - L1PA3 LINE L1 -3 6152 3936 10394 57 0 31 chr5 162734195 162735647 -36894503 + L1P LINE L1 1 1407 -4739 21 0 0 0 chr5 162735707 162735728 -36894422 + AT_rich Low_complexity Low_complexity 1 21 0 263 252 221 8 chr5 162736639 162736770 -36893380 - MIR3 SINE MIR -19 189 31 23 33 0 0 chr5 162737194 162737224 -36892926 + AT_rich Low_complexity Low_complexity 1 30 0 1092 241 101 11 chr5 162738550 162738928 -36891222 + L1MC4 LINE L1 7254 7665 -377 189 0 0 0 chr5 162738930 162738951 -36891199 + (TTA)n Simple_repeat Simple_repeat 1 21 0 3732 168 84 22 chr5 162739017 162740243 -36889907 - L1MB7 LINE L1 -43 6141 4840 2859 155 30 0 chr5 162740239 162740736 -36889414 + L1MA7 LINE L1 5257 5768 -523 * 29302 34 4 0 chr5 162740735 162745082 -36885068 - L1PA4 LINE L1 -2 6153 1794 2924 80 0 0 chr5 162745080 162745455 -36884695 - L1PA4 LINE L1 -5770 376 2 * 2952 118 33 25 chr5 162745474 162745989 -36884161 + L1MA7 LINE L1 5773 6291 0 366 213 0 0 chr5 162746040 162746115 -36884035 - L1MB7 LINE L1 -1356 4790 4716 353 224 0 0 chr5 162746135 162746211 -36883939 - L1MB7 LINE L1 -1538 4608 4533 209 254 84 14 chr5 162746613 162746684 -36883466 + MIR SINE MIR 84 159 -103 2892 149 2 14 chr5 162747490 162747980 -36882170 - MER66B LTR ERV1 0 486 3 553 295 42 11 chr5 162747982 162748172 -36881978 + MIR SINE MIR 67 262 0 1414 147 43 140 chr5 162748226 162748647 -36881503 - MER31B LTR ERV1 -82 384 5 2094 141 0 0 chr5 162748648 162748945 -36881205 + AluSx SINE Alu 1 297 -15 190 383 65 0 chr5 162748958 162749065 -36881085 + L2 LINE L2 3200 3313 0 235 289 53 53 chr5 162749067 162749181 -36880969 - MIR SINE MIR -73 135 22 578 322 48 26 chr5 162750039 162750312 -36879838 - L3 LINE CR1 -5 1572 1294 260 326 20 0 chr5 162750930 162751028 -36879122 + MIR SINE MIR 163 262 0 251 259 65 74 chr5 162751182 162751290 -36878860 + MIR SINE MIR 49 155 -107 225 312 26 13 chr5 162751286 162751363 -36878787 + MIR SINE MIR 11 88 -174 * 195 69 0 0 chr5 162751623 162751652 -36878498 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 391 291 55 42 chr5 162751848 162752013 -36878137 - MIR SINE MIR -15 247 81 378 309 28 45 chr5 162753024 162753202 -36876948 - L3 LINE CR1 -3 1574 1400 24 0 0 0 chr5 162753498 162753522 -36876628 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 162753642 162753664 -36876486 + AT_rich Low_complexity Low_complexity 1 22 0 345 240 66 25 chr5 162754642 162754763 -36875387 - L2 LINE L2 -4 3309 3184 411 357 120 32 chr5 162755235 162755518 -36874632 - L2 LINE L2 0 3272 2965 1443 168 3 129 chr5 162755568 162755925 -36874225 + AluJb SINE Alu 1 312 0 212 289 178 30 chr5 162756173 162756370 -36873780 + L2 LINE L2 2826 3051 -221 497 301 118 22 chr5 162757875 162758104 -36872046 + MIR SINE MIR 4 254 -8 21 0 0 0 chr5 162758407 162758428 -36871722 + AT_rich Low_complexity Low_complexity 1 21 0 190 309 53 64 chr5 162758431 162758525 -36871625 + L2 LINE L2 3150 3242 -30 23 33 0 0 chr5 162759494 162759524 -36870626 + AT_rich Low_complexity Low_complexity 1 30 0 700 286 29 0 chr5 162759994 162760200 -36869950 + MIR SINE MIR 51 262 0 358 351 134 27 chr5 162760233 162760495 -36869655 - L3 LINE CR1 -56 1521 1232 250 281 34 0 chr5 162760501 162760590 -36869560 - MIR SINE MIR -7 255 164 202 347 82 10 chr5 162760608 162760706 -36869444 + L2 LINE L2 3189 3293 -20 223 325 73 24 chr5 162760756 162760879 -36869271 - MIR SINE MIR -131 131 3 503 270 15 29 chr5 162761848 162761985 -36868165 + MIR SINE MIR 72 206 -56 360 336 26 53 chr5 162762399 162762625 -36867525 - L3 LINE CR1 -4 1573 1354 526 315 77 22 chr5 162763262 162763484 -36866666 + MIR SINE MIR 3 236 -26 2362 165 21 37 chr5 162763504 162763935 -36866215 - MSTB LTR MaLR -2 424 1 503 349 56 28 chr5 162764148 162764400 -36865750 + MIR SINE MIR 1 259 -3 675 243 148 5 chr5 162764852 162765054 -36865096 - MIR SINE MIR -30 232 2 364 246 123 69 chr5 162765624 162765827 -36864323 - L2 LINE L2 -922 2392 2179 287 336 45 15 chr5 162766497 162766631 -36863519 - L3 LINE CR1 -61 1516 1379 24 85 0 0 chr5 162767016 162767075 -36863075 + AT_rich Low_complexity Low_complexity 1 59 0 23 0 0 0 chr5 162767444 162767467 -36862683 + AT_rich Low_complexity Low_complexity 1 23 0 1926 218 23 6 chr5 162767642 162768128 -36862022 - L1 LINE L1 -850 5296 4803 2452 177 13 72 chr5 162768132 162768753 -36861397 + L1MA10 LINE L1 5750 6333 -1 1318 363 24 37 chr5 162768838 162769540 -36860610 - MER115 DNA AcHobo 0 693 1 202 200 0 0 chr5 162769628 162769668 -36860482 + (TTG)n Simple_repeat Simple_repeat 2 41 0 612 225 9 0 chr5 162769945 162770056 -36860094 - MER2 DNA MER2_type -1 344 233 10178 35 0 0 chr5 162770157 162771388 -36858762 - L1P LINE L1 -830 5316 4086 261 155 52 0 chr5 162771445 162771503 -36858647 - MER2 DNA MER2_type -134 211 151 558 226 43 100 chr5 162771503 162771733 -36858417 + MER8 DNA MER2_type 1 217 -22 270 157 0 20 chr5 162771690 162771741 -36858409 - Tigger2a DNA MER2_type -370 64 15 * 876 172 14 7 chr5 162771740 162771885 -36858265 - MER2 DNA MER2_type -198 147 2 405 316 24 61 chr5 162772526 162772738 -36857412 - L3 LINE CR1 -4 1573 1370 385 244 13 0 chr5 162772741 162772819 -36857331 + FLAM_A SINE Alu 5 83 -50 207 333 0 0 chr5 162772854 162772905 -36857245 - L2 LINE L2 -37 3235 3185 532 284 55 33 chr5 162772948 162773131 -36857019 + MIR SINE MIR 1 187 -75 444 277 231 7 chr5 162773131 162773413 -36856737 - L3 LINE CR1 -232 1345 1001 306 0 0 0 chr5 162773446 162773480 -36856670 + (TTA)n Simple_repeat Simple_repeat 3 36 0 5588 23 0 0 chr5 162773480 162774125 -36856025 - L1PA4 LINE L1 -18 6137 5493 2309 106 0 0 chr5 162774454 162774755 -36855395 - AluSx SINE Alu -11 301 1 13512 137 37 28 chr5 162775073 162776512 -36853638 + Tigger1 DNA MER2_type 1 1474 -944 2217 117 3 0 chr5 162776512 162776819 -36853331 + AluSg SINE Alu 1 308 -2 13512 137 37 28 chr5 162776819 162777774 -36852376 + Tigger1 DNA MER2_type 1474 2418 0 196 298 0 18 chr5 162777896 162777953 -36852197 - MIR3 SINE MIR 0 208 153 292 290 83 65 chr5 162778076 162778245 -36851905 - MIR3 SINE MIR -35 173 2 525 295 26 0 chr5 162778889 162779045 -36851105 - MIR3 SINE MIR -13 195 36 477 333 0 31 chr5 162779475 162779637 -36850513 - MIR3 SINE MIR -24 184 28 369 305 0 0 chr5 162779897 162780002 -36850148 - MIR SINE MIR -71 137 33 240 226 29 118 chr5 162780108 162780210 -36849940 - MIR3 SINE MIR -6 202 110 242 366 67 0 chr5 162782630 162782764 -36847386 + MIR SINE MIR 12 154 -108 774 272 111 66 chr5 162782765 162783279 -36846871 - MLT1H1 LTR MaLR -18 537 1 2218 146 42 5 chr5 162783415 162783820 -36846330 - L1MB3 LINE L1 -7 6176 5757 265 157 0 0 chr5 162783844 162783895 -36846255 - L1MB2 LINE L1 -2 6169 6119 1314 107 9 9 chr5 162783909 162784125 -36846025 - L1MA5 LINE L1 0 6300 6085 1143 108 54 0 chr5 162784125 162784310 -36845840 + L1MA5 LINE L1 5750 5944 -356 2992 162 103 2 chr5 162784317 162784891 -36845259 - L1MB2 LINE L1 -49 6122 5491 306 270 0 0 chr5 162784896 162784970 -36845180 + MIR SINE MIR 189 262 0 1620 174 35 120 chr5 162785409 162785455 -36844695 + MSTD LTR MaLR 1 49 -347 1950 157 123 8 chr5 162785455 162785837 -36844313 + MSTA LTR MaLR 3 428 0 1620 174 35 120 chr5 162785837 162786222 -36843928 + MSTD LTR MaLR 49 395 -1 303 263 144 8 chr5 162786348 162786466 -36843684 - L2 LINE L2 0 3272 3139 1202 213 132 8 chr5 162786546 162786903 -36843247 + L1MA10 LINE L1 5927 6327 -7 340 265 122 41 chr5 162787327 162787474 -36842676 - L2 LINE L2 0 3272 3114 524 291 35 78 chr5 162788083 162788365 -36841785 + MLT1K LTR MaLR 312 581 -7 629 344 74 38 chr5 162788922 162789419 -36840731 + MLT1K LTR MaLR 7 521 -67 3164 107 19 8 chr5 162789810 162790296 -36839854 + L1MA3 LINE L1 5808 6298 -7 446 257 99 7 chr5 162790396 162790548 -36839602 + MER117 DNA MER1_type 1 166 -31 273 214 29 57 chr5 162790647 162790717 -36839433 - MER20B DNA MER1_type -699 84 17 2276 220 73 6 chr5 162791377 162791899 -36838251 - MER90 LTR ERV1 0 614 58 311 305 66 30 chr5 162791929 162792096 -36838054 + L2 LINE L2 3139 3311 -2 198 338 59 0 chr5 162792116 162792184 -36837966 + L2 LINE L2 3149 3220 -52 21 0 0 0 chr5 162792509 162792530 -36837620 + AT_rich Low_complexity Low_complexity 1 21 0 472 171 0 0 chr5 162792544 162792620 -36837530 + AluJb SINE Alu 201 276 -36 519 45 0 0 chr5 162792620 162792686 -36837464 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 240 320 10 20 chr5 162792880 162792980 -36837170 + MIR SINE MIR 88 186 -76 1547 132 0 29 chr5 162793263 162793505 -36836645 - AluSx SINE Alu -20 292 58 197 284 49 25 chr5 162793585 162793666 -36836484 + MIR SINE MIR 66 148 -114 236 320 13 0 chr5 162793784 162793862 -36836288 + L2 LINE L2 3231 3309 -4 532 360 23 9 chr5 162793949 162794163 -36835987 + MIR SINE MIR 29 245 -17 3820 189 76 11 chr5 162795182 162796564 -36833586 + L1MB7 LINE L1 4665 6140 -44 469 236 36 0 chr5 162796942 162797052 -36833098 - MER81 DNA DNA 0 114 1 339 314 16 18 chr5 162797082 162797276 -36832874 - MIR SINE MIR -13 249 14 2026 127 23 48 chr5 162847297 162847691 -36782459 - MLT1B LTR MaLR 0 390 7 347 252 53 30 chr5 162847724 162847855 -36782295 + HERV16 LTR ERVL 3358 3491 -2163 279 260 26 0 chr5 162847845 162847922 -36782228 + HERV16 LTR ERVL 3237 3315 -1681 * 447 282 86 22 chr5 162847907 162848229 -36781921 - ERVL LTR ERVL -1222 4305 3617 501 88 62 0 chr5 162848490 162848570 -36781580 + L1PA11 LINE L1 6089 6173 -1 612 310 27 15 chr5 162848633 162848894 -36781256 - ERVL LTR ERVL -2148 3506 3243 1465 307 19 19 chr5 162848938 162849505 -36780645 - ERVL LTR ERVL -2078 2918 2352 3534 89 12 0 chr5 162849605 162850121 -36780029 - L1P LINE L1 -1867 4279 3758 2378 73 0 0 chr5 162850115 162850445 -36779705 + L1PA7 LINE L1 4893 5222 -924 * 352 103 17 0 chr5 162850445 162850503 -36779647 - AluY SINE Alu -5 295 237 1493 94 5 15 chr5 162850503 162850706 -36779444 - AluY SINE Alu -110 201 1 6760 68 10 0 chr5 162850707 162851632 -36778518 + L1PA7 LINE L1 5221 6154 0 231 362 0 0 chr5 162852023 162852117 -36778033 + MIR SINE MIR 46 139 -123 401 306 36 9 chr5 162852241 162852578 -36777572 + L1M4 LINE L1 3034 3379 -2767 310 339 88 1 chr5 162853097 162853248 -36776902 + MIR SINE MIR 16 175 -59 386 248 5 163 chr5 162853593 162853795 -36776355 + MER5A DNA MER1_type 20 189 0 623 242 142 0 chr5 162854094 162854284 -36775866 + L2 LINE L2 1795 2011 -1303 1371 276 144 2 chr5 162854311 162854730 -36775420 - L1ME3 LINE L1 -30 6201 5665 351 0 0 0 chr5 162854730 162854769 -36775381 + (TG)n Simple_repeat Simple_repeat 2 40 0 1371 276 144 2 chr5 162854769 162854966 -36775184 - L1ME3 LINE L1 -566 5665 5497 1816 263 89 47 chr5 162855420 162855759 -36774391 - L1ME3 LINE L1 -719 5514 5191 1933 137 3 3 chr5 162855759 162856044 -36774106 + AluSx SINE Alu 1 285 -27 1816 263 89 47 chr5 162856044 162856109 -36774041 - L1ME3 LINE L1 -1042 5191 5130 1630 175 45 7 chr5 162856109 162856400 -36773750 - AluJo SINE Alu -10 302 1 1816 263 89 47 chr5 162856400 162857521 -36772629 - L1ME3 LINE L1 -1103 5130 3914 316 321 0 27 chr5 162857616 162857728 -36772422 + LTR16A LTR ERVL 77 185 -265 576 272 71 30 chr5 162857834 162859031 -36771119 - L1ME3 LINE L1 -3700 2521 1265 337 196 10 10 chr5 162859080 162859177 -36770973 + (TA)n Simple_repeat Simple_repeat 2 98 0 2358 108 0 0 chr5 162859423 162859728 -36770422 - AluSg SINE Alu -5 305 1 291 89 0 0 chr5 162860011 162860056 -36770094 + MADE1 DNA Mariner 34 78 -2 2036 286 119 47 chr5 162860267 162861505 -36768645 + L2 LINE L2 1985 3298 -15 1066 310 143 22 chr5 162861517 162862195 -36767955 + L2 LINE L2 2530 3313 0 2648 199 33 46 chr5 162862648 162863282 -36766868 - MER82 DNA MER2_type -7 646 21 731 291 47 24 chr5 162863597 162863851 -36766299 + MIR SINE MIR 3 262 0 870 241 85 45 chr5 162864351 162864798 -36765352 + MLT2B1 LTR ERVL 1 508 -12 2150 134 30 35 chr5 162865029 162865395 -36764755 + THE1B LTR MaLR 1 364 0 524 257 60 92 chr5 162865475 162865669 -36764481 + MIR SINE MIR 46 234 -28 2085 182 25 52 chr5 162865669 162866148 -36764002 - MER31B LTR ERV1 0 466 1 524 257 60 92 chr5 162866148 162866171 -36763979 + MIR SINE MIR 234 256 -6 276 283 9 62 chr5 162866533 162866723 -36763427 + GA-rich Low_complexity Low_complexity 1 180 0 22 0 0 0 chr5 162866766 162866788 -36763362 + AT_rich Low_complexity Low_complexity 1 22 0 193 272 132 35 chr5 162867152 162867266 -36762884 + MER5A DNA MER1_type 21 145 -44 313 315 81 0 chr5 162867309 162867420 -36762730 + MLT1I LTR MaLR 40 159 -250 1743 200 45 41 chr5 162868856 162869321 -36760829 + MLT1C LTR MaLR 1 467 0 3400 142 7 7 chr5 162869699 162870285 -36759865 + L1MA4 LINE L1 5708 6293 -7 23 33 0 0 chr5 162870285 162870315 -36759835 + AT_rich Low_complexity Low_complexity 1 30 0 1737 183 10 7 chr5 162870734 162871024 -36759126 - AluSx SINE Alu -21 291 1 455 227 57 7 chr5 162872483 162872624 -36757526 - MIR SINE MIR -86 176 29 2306 134 28 14 chr5 162872757 162873116 -36757034 + THE1B LTR MaLR 1 364 0 10999 106 15 23 chr5 162873116 162874709 -36755441 + THE1B-int LTR MaLR 1 1580 0 2006 159 45 14 chr5 162874710 162875062 -36755088 + THE1B LTR MaLR 2 364 0 369 320 136 18 chr5 162875062 162875334 -36754816 - L3 LINE CR1 -75 1502 1199 986 162 112 10 chr5 162875335 162875532 -36754618 + MER20 DNA MER1_type 3 219 0 321 346 30 23 chr5 162875790 162875923 -36754227 + L2 LINE L2 3138 3271 -1 776 198 167 0 chr5 162876282 162876444 -36753706 - MER5A DNA MER1_type 0 189 1 369 272 42 74 chr5 162877153 162877370 -36752780 + MIR SINE MIR 49 258 -4 17698 170 10 5 chr5 162877655 162883862 -36746288 + L1PA14 LINE L1 1348 7590 -9 438 69 0 0 chr5 162883874 162883932 -36746218 + (TA)n Simple_repeat Simple_repeat 1 58 0 40 37 0 0 chr5 162883935 162883989 -36746161 + AT_rich Low_complexity Low_complexity 1 54 0 480 263 29 109 chr5 162884463 162884737 -36745413 - MIR SINE MIR -8 254 3 396 300 53 97 chr5 162885277 162885637 -36744513 + L2 LINE L2 2925 3268 -4 391 331 8 0 chr5 162886163 162886290 -36743860 + L3 LINE CR1 1113 1240 -337 259 337 0 0 chr5 162886701 162886799 -36743351 + GA-rich Low_complexity Low_complexity 2 99 0 281 265 128 0 chr5 162886800 162886902 -36743248 + MLT1K LTR MaLR 395 509 -79 588 125 0 0 chr5 162887729 162887825 -36742325 + (TC)n Simple_repeat Simple_repeat 1 96 0 187 297 62 0 chr5 162888750 162888814 -36741336 - L3 LINE CR1 -1189 388 321 244 292 46 0 chr5 162888867 162888932 -36741218 + L2 LINE L2 3169 3236 -77 583 323 139 30 chr5 162889111 162889672 -36740478 - L2 LINE L2 -337 2977 2356 346 373 19 24 chr5 162889752 162889961 -36740189 - MIR SINE MIR -54 208 1 1523 70 0 0 chr5 162890818 162891089 -36739061 + AluY SINE Alu 98 368 0 711 194 8 0 chr5 162891101 162891225 -36738925 + FLAM_C SINE Alu 3 127 -16 378 245 82 6 chr5 162891407 162891566 -36738584 + Tigger8 DNA MER2_type 205 375 -291 302 379 0 8 chr5 162892375 162892499 -36737651 + GA-rich Low_complexity Low_complexity 4 126 0 420 289 0 0 chr5 162892952 162893056 -36737094 + MER5B DNA MER1_type 1 104 -74 368 219 48 9 chr5 162893078 162893183 -36736967 - MER53 DNA DNA -1 188 80 259 152 22 0 chr5 162893196 162893242 -36736908 - MER5B DNA MER1_type -124 54 8 254 227 0 34 chr5 162893379 162893467 -36736683 + L1ME4a LINE L1 5944 6028 -93 2419 157 32 21 chr5 162894132 162894603 -36735547 + LTR45B LTR ERV1 14 489 0 259 252 176 17 chr5 162895112 162895137 -36735013 - MIR3 SINE MIR -11 197 177 1417 113 45 5 chr5 162895137 162895358 -36734792 + MER30 DNA MER1_type 1 230 0 259 252 176 17 chr5 162895358 162895451 -36734699 - MIR3 SINE MIR -31 177 60 268 356 158 5 chr5 162895790 162895992 -36734158 + L3 LINE CR1 826 1058 -519 249 280 160 10 chr5 162896021 162896121 -36734029 + L2 LINE L2 2921 3035 -278 199 351 26 13 chr5 162896226 162896303 -36733847 + L2 LINE L2 3177 3254 -18 300 287 49 16 chr5 162896422 162896544 -36733606 + L3 LINE CR1 1170 1295 -282 458 242 160 51 chr5 162896547 162896803 -36733347 - L2 LINE L2 0 3313 3030 373 281 50 29 chr5 162896822 162896849 -36733301 + L3 LINE CR1 1319 1344 -233 772 247 23 0 chr5 162896849 162897023 -36733127 - MER5B DNA MER1_type 0 178 1 373 281 50 29 chr5 162897023 162897134 -36733016 + L3 LINE CR1 1344 1460 -117 2962 185 17 58 chr5 162897147 162897552 -36732598 + L1MB4 LINE L1 5435 5855 -325 2281 78 4 0 chr5 162897552 162897863 -36732287 - AluSp SINE Alu 0 312 1 2962 185 17 58 chr5 162897863 162898148 -36732002 + L1MB4 LINE L1 5855 6093 -87 2104 115 56 6 chr5 162898148 162898486 -36731664 - L1PA15 LINE L1 -3 6162 5808 2962 185 17 58 chr5 162898486 162898571 -36731579 + L1MB4 LINE L1 6093 6180 0 206 276 92 10 chr5 162898580 162898678 -36731472 + L3 LINE CR1 1467 1572 -5 225 0 0 0 chr5 162899435 162899460 -36730690 + (CA)n Simple_repeat Simple_repeat 1 25 0 2279 116 0 0 chr5 162899500 162899810 -36730340 - AluSx SINE Alu 0 312 3 385 360 0 0 chr5 162899829 162899940 -36730210 + MIR3 SINE MIR 50 160 -48 594 261 34 11 chr5 162899943 162900119 -36730031 - L2 LINE L2 -6 3307 3128 375 308 151 0 chr5 162900131 162900277 -36729873 - MER5A DNA MER1_type -6 183 16 941 314 235 13 chr5 162900369 162901226 -36728924 - L2 LINE L2 -238 3034 1995 274 96 68 0 chr5 162901229 162901302 -36728848 + (TA)n Simple_repeat Simple_repeat 2 79 0 1293 180 42 46 chr5 162901808 162902184 -36727966 + MER67C LTR ERV1 1 396 -243 342 260 80 40 chr5 162902201 162902351 -36727799 + MER67D LTR ERV1 356 511 -3 2332 184 10 0 chr5 162902378 162902792 -36727358 - MER47B DNA MER2_type 0 418 1 430 184 23 0 chr5 162903069 162903156 -36726994 + MER89 LTR ERV1 1 89 -470 * 1373 218 16 40 chr5 162903131 162903503 -36726647 + MER89 LTR ERV1 197 559 0 180 0 0 0 chr5 162903694 162903714 -36726436 + (A)n Simple_repeat Simple_repeat 1 20 0 877 239 27 18 chr5 162904792 162905014 -36725136 + MER58A DNA MER1_type 1 224 0 1487 308 84 51 chr5 162905372 162906288 -36723862 + L2 LINE L2 2325 3281 -32 1679 168 55 6 chr5 162906301 162906629 -36723521 - MER2 DNA MER2_type 0 344 1 240 59 0 0 chr5 162906637 162906671 -36723479 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 256 374 91 18 chr5 162906675 162906894 -36723256 + L2 LINE L2 2624 2858 -456 265 315 34 0 chr5 162906965 162907054 -36723096 + L2 LINE L2 2966 3057 -215 2307 108 0 0 chr5 162907549 162907846 -36722304 + AluSg SINE Alu 1 297 -13 330 259 190 16 chr5 162908698 162909003 -36721147 + L1ME4a LINE L1 5592 5949 -172 633 327 8 46 chr5 162959238 162959498 -36670652 + MIR SINE MIR 13 262 0 2541 69 60 0 chr5 162959664 162959999 -36670151 - THE1A LTR MaLR 0 355 1 299 314 99 35 chr5 162960168 162960340 -36669810 + MIR SINE MIR 74 256 -6 443 286 143 48 chr5 162960491 162960945 -36669205 + L1M4 LINE L1 2918 3414 -2732 420 352 113 0 chr5 162960949 162961162 -36668988 - MIR SINE MIR -6 256 20 22 0 0 0 chr5 162961478 162961500 -36668650 + AT_rich Low_complexity Low_complexity 1 22 0 1616 247 50 31 chr5 162961751 162962849 -36667301 + L1MB8 LINE L1 1213 2493 -4464 6410 210 19 11 chr5 162962857 162964349 -36665801 - L1PB1 LINE L1 -1649 4497 2994 3554 166 35 9 chr5 162964345 162965287 -36664863 + L1PB1 LINE L1 4522 5502 -649 * 213 39 0 0 chr5 162965287 162965313 -36664837 + (TAA)n Simple_repeat Simple_repeat 2 27 0 3554 166 35 9 chr5 162965313 162965611 -36664539 + L1PB1 LINE L1 5502 5791 -360 323 113 50 0 chr5 162965621 162965701 -36664449 + (TA)n Simple_repeat Simple_repeat 1 84 0 2628 92 3 0 chr5 162965712 162966072 -36664078 + L1PB1 LINE L1 5791 6151 0 3991 243 52 41 chr5 162966210 162966307 -36663843 + L1MB8 LINE L1 2476 2570 -4387 1400 121 45 14 chr5 162966307 162966530 -36663620 + MER30 DNA MER1_type 1 230 0 3991 243 52 41 chr5 162966530 162968236 -36661914 + L1MB8 LINE L1 2570 4259 -2698 3909 211 40 14 chr5 162968207 162969263 -36660887 + L1MB8 LINE L1 5371 6398 -591 * 1994 161 6 20 chr5 162969263 162969616 -36660534 + MER7A DNA MER2_type 1 346 0 3909 211 40 14 chr5 162969616 162970062 -36660088 + L1MB8 LINE L1 6398 6919 -70 1913 174 10 42 chr5 162970062 162970465 -36659685 - MLT1B LTR MaLR 0 390 1 3909 211 40 14 chr5 162970465 162970538 -36659612 + L1MB8 LINE L1 6919 6989 0 312 250 99 81 chr5 162970802 162970974 -36659176 - L2 LINE L2 0 3313 3139 802 168 126 27 chr5 162970974 162971280 -36658870 + THE1C LTR MaLR 1 364 0 1170 301 16 6 chr5 162971357 162971754 -36658396 - L2 LINE L2 -299 3014 2616 339 309 92 24 chr5 162971814 162972063 -36658087 + HAL1 LINE L1 2186 2451 -56 22 35 0 0 chr5 162972505 162972534 -36657616 + AT_rich Low_complexity Low_complexity 1 29 0 195 162 0 0 chr5 162972772 162972809 -36657341 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 381 58 0 0 chr5 162973102 162973154 -36656996 + (GA)n Simple_repeat Simple_repeat 2 53 0 459 240 89 97 chr5 162973173 162973431 -36656719 - MER102b DNA MER1_type -14 327 72 214 299 22 75 chr5 162973550 162973684 -36656466 + MIR SINE MIR 82 208 -54 296 333 16 32 chr5 162974441 162974567 -36655583 - L2 LINE L2 -462 2852 2729 1878 133 171 11 chr5 162974858 162975227 -36654923 + MSTA LTR MaLR 1 428 0 5042 193 87 60 chr5 162975229 162975715 -36654435 + MSTA-int LTR MaLR 3 475 -1105 2026 147 0 0 chr5 162975715 162976008 -36654142 + AluSx SINE Alu 1 293 -19 5042 193 87 60 chr5 162976008 162976069 -36654081 + MSTA-int LTR MaLR 475 533 -1047 2036 137 20 3 chr5 162976069 162976369 -36653781 + AluSg SINE Alu 1 305 -5 5042 193 87 60 chr5 162976369 162977358 -36652792 + MSTA-int LTR MaLR 533 1580 0 1471 135 156 132 chr5 162977360 162977776 -36652374 + MSTA LTR MaLR 3 428 0 489 308 40 43 chr5 162978881 162979350 -36650800 + MLT1J LTR MaLR 1 506 -5 561 229 102 57 chr5 162980331 162980560 -36649590 - MLT1K LTR MaLR 0 611 374 899 317 26 26 chr5 162980721 162981112 -36649038 - MLT1I LTR MaLR 0 409 19 325 291 60 30 chr5 162981143 162981277 -36648873 - MLT1L LTR MaLR -388 227 90 648 280 39 44 chr5 162981650 162982061 -36648089 + L1ME4a LINE L1 5505 5913 -208 318 248 26 62 chr5 162984733 162984846 -36645304 - MIR SINE MIR 0 262 154 * 693 254 17 79 chr5 162984836 162985076 -36645074 - MIR SINE MIR -10 252 28 2293 110 0 0 chr5 162986228 162986528 -36643622 - AluSp SINE Alu -13 300 1 517 114 0 0 chr5 162986992 162987071 -36643079 - MER53 DNA DNA -1 188 110 216 67 0 0 chr5 162987095 162987125 -36643025 + (ATG)n Simple_repeat Simple_repeat 3 32 0 21 0 0 0 chr5 162987749 162987770 -36642380 + AT_rich Low_complexity Low_complexity 1 21 0 246 270 126 52 chr5 162987938 162987987 -36642163 + MER5A DNA MER1_type 2 46 -143 207 0 0 0 chr5 162987987 162988010 -36642140 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 246 270 126 52 chr5 162988010 162988134 -36642016 + MER5A DNA MER1_type 46 188 -1 186 289 22 0 chr5 162991270 162991315 -36638835 - MIR3 SINE MIR -10 198 153 1603 271 70 37 chr5 162992151 162992926 -36637224 + HAL1b LINE L1 80 879 -469 1296 202 0 0 chr5 162992927 162993145 -36637005 + MER58A DNA MER1_type 1 218 -6 236 279 72 9 chr5 162993285 162993396 -36636754 + HAL1b LINE L1 873 990 -358 396 255 83 14 chr5 162993430 162993575 -36636575 + HAL1b LINE L1 1193 1347 -1 880 279 113 34 chr5 162994003 162994552 -36635598 + L2 LINE L2 2713 3313 0 1848 170 28 38 chr5 162994621 162995015 -36635135 + MLT1B LTR MaLR 1 390 0 4428 194 66 27 chr5 162995172 162996173 -36633977 - MER45B DNA AcHobo 0 1040 1 361 335 26 7 chr5 162996630 162996785 -36633365 + MIR3 SINE MIR 18 175 -33 197 357 43 0 chr5 162997278 162997348 -36632802 + MIR SINE MIR 48 120 -88 798 309 120 36 chr5 162997390 162997889 -36632261 + MLT1K LTR MaLR 48 588 0 612 311 120 14 chr5 162998128 162998485 -36631665 + L2 LINE L2 2237 2631 -683 438 271 9 43 chr5 162999370 162999508 -36630642 - MIR SINE MIR -63 145 52 239 364 144 26 chr5 163000392 163000656 -36629494 + L2 LINE L2 2976 3270 -2 344 213 32 11 chr5 163001033 163001127 -36629023 - MER102b DNA MER1_type -112 229 134 189 180 0 131 chr5 163001413 163001474 -36628676 + L2 LINE L2 3254 3306 -7 9151 189 16 13 chr5 163001766 163002759 -36627391 + L1PA15 LINE L1 3390 4379 -1786 2424 82 0 3 chr5 163002759 163003064 -36627086 + AluY SINE Alu 1 304 -7 9151 189 16 13 chr5 163003064 163004840 -36625310 + L1PA15 LINE L1 4379 6161 -4 2406 112 43 8 chr5 163004844 163005219 -36624931 + L1PA15 LINE L1 5772 6159 -6 194 277 38 149 chr5 163005275 163005510 -36624640 - L2 LINE L2 -103 3169 2961 * 564 258 64 119 chr5 163005506 163005660 -36624490 - L2 LINE L2 0 3313 3152 2382 69 3 0 chr5 163005660 163005951 -36624199 - AluY SINE Alu -19 292 1 564 258 64 119 chr5 163005951 163005964 -36624186 - L2 LINE L2 -161 3152 3140 2475 79 16 24 chr5 163005964 163006333 -36623817 - L1PA10 LINE L1 -2 6166 5801 564 258 64 119 chr5 163006333 163006509 -36623641 - L2 LINE L2 -173 3140 2988 386 246 14 101 chr5 163007335 163007542 -36622608 - MER102b DNA MER1_type -2 339 151 271 271 33 57 chr5 163007602 163007724 -36622426 - MER102b DNA MER1_type -222 119 1 196 313 122 8 chr5 163007731 163007862 -36622288 - L2 LINE L2 -89 3224 3079 229 299 51 36 chr5 163008014 163008151 -36621999 + MER5A DNA MER1_type 23 161 -28 260 245 38 94 chr5 163009390 163009496 -36620654 - MIR SINE MIR -56 206 107 2165 138 3 0 chr5 163009909 163010221 -36619929 - AluSq SINE Alu 0 313 1 2565 68 0 0 chr5 163010225 163010535 -36619615 - AluY SINE Alu -1 310 1 11310 218 52 40 chr5 163011766 163012315 -36617835 - L1MA10 LINE L1 -3 7291 6750 7007 51 20 1 chr5 163012315 163013155 -36616995 - L1PA7 LINE L1 -7 6147 5274 351 44 0 0 chr5 163013155 163013200 -36616950 + (TG)n Simple_repeat Simple_repeat 2 46 0 7007 51 20 1 chr5 163013200 163013980 -36616170 - L1PA7 LINE L1 -880 5274 4511 11310 218 52 40 chr5 163013980 163019632 -36610518 - L1MA10 LINE L1 -544 6750 1 219 334 88 75 chr5 163025852 163026214 -36603936 + L3b LINE CR1 1125 1491 -92 852 174 7 21 chr5 163026620 163026764 -36603386 + AluJb SINE Alu 112 253 -59 423 89 25 13 chr5 163026764 163026843 -36603307 + (GAAA)n Simple_repeat Simple_repeat 2 81 0 409 341 77 51 chr5 163026854 163027467 -36602683 - L2 LINE L2 -739 2575 1947 716 329 23 10 chr5 163027543 163027850 -36602300 + MLT1I LTR MaLR 87 397 -12 1007 304 80 2 chr5 163027987 163028412 -36601738 - LTR33A LTR ERVL -4 519 62 204 40 0 0 chr5 163028457 163028482 -36601668 + (CAGAG)n Simple_repeat Simple_repeat 4 28 0 292 369 8 16 chr5 163028637 163028759 -36601391 - L2 LINE L2 -428 2886 2766 28 61 0 0 chr5 163029013 163029062 -36601088 + AT_rich Low_complexity Low_complexity 1 49 0 202 317 59 0 chr5 163029073 163029174 -36600976 + L3 LINE CR1 1146 1252 -325 277 312 26 0 chr5 163029553 163029650 -36600500 - MIR SINE MIR -66 142 46 234 261 58 101 chr5 163030303 163030441 -36599709 + MIR SINE MIR 20 151 -111 331 309 115 50 chr5 163030944 163031083 -36599067 + MER5A DNA MER1_type 39 186 -3 180 0 0 0 chr5 163031171 163031191 -36598959 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 248 346 119 30 chr5 163031720 163032023 -36598127 + L2 LINE L2 2836 3165 -148 439 339 159 16 chr5 163032887 163033326 -36596824 + L2 LINE L2 1998 2499 -815 446 107 0 13 chr5 163034385 163034460 -36595690 + (TCCC)n Simple_repeat Simple_repeat 4 77 0 393 312 0 0 chr5 163034463 163034572 -36595578 - L2 LINE L2 -1 3312 3204 230 242 0 16 chr5 163035308 163035370 -36594780 + MLT1K LTR MaLR 509 569 -19 192 200 0 0 chr5 163035466 163035511 -36594639 + (TATATG)n Simple_repeat Simple_repeat 1 45 0 428 319 158 6 chr5 163035708 163036234 -36593916 - L1MC4a LINE L1 -1876 5932 5327 195 42 0 0 chr5 163036332 163036356 -36593794 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1555 159 87 7 chr5 163036388 163036665 -36593485 - AluJb SINE Alu -13 299 1 376 355 99 0 chr5 163037167 163037339 -36592811 - MIR SINE MIR -51 211 23 195 330 11 64 chr5 163038183 163038205 -36591945 - L2 LINE L2 -38 3275 3253 219 69 0 0 chr5 163038205 163038234 -36591916 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 195 330 11 64 chr5 163038234 163038305 -36591845 - L2 LINE L2 -60 3253 3187 1036 276 42 39 chr5 163038305 163038982 -36591168 - L1ME LINE L1 -4021 2059 1400 821 156 10 26 chr5 163038983 163039208 -36590942 + CT-rich Low_complexity Low_complexity 1 221 0 229 185 31 31 chr5 163039211 163039276 -36590874 - L1M2 LINE L1 -4384 2465 2401 1060 193 56 80 chr5 163039420 163039669 -36590481 - AluJo SINE Alu -69 243 1 1769 270 71 25 chr5 163039679 163039933 -36590217 - L1ME LINE L1 -5028 1055 814 2010 130 3 19 chr5 163039933 163040249 -36589901 - AluSx SINE Alu 0 312 2 1769 270 71 25 chr5 163040249 163040989 -36589161 - L1ME LINE L1 -5269 814 18 388 245 20 0 chr5 163041152 163041250 -36588900 + MIR SINE MIR 162 261 -1 504 319 69 37 chr5 163041267 163041735 -36588415 - L2 LINE L2 -212 3060 2575 219 357 61 34 chr5 163041967 163042230 -36587920 + L2 LINE L2 2565 2834 -480 201 321 205 0 chr5 163042220 163042332 -36587818 - L2 LINE L2 -1 3271 3137 * 212 261 0 72 chr5 163042791 163042860 -36587290 - MIR SINE MIR -57 151 88 453 268 0 24 chr5 163043286 163043425 -36586725 - MIR3 SINE MIR -50 158 28 2355 91 16 0 chr5 163044106 163044414 -36585736 - AluSp SINE Alu 0 313 1 1937 194 62 28 chr5 163044458 163044927 -36585223 + MLT2B1 LTR ERVL 1 485 -35 209 167 0 37 chr5 163044929 163044983 -36585167 + (TTATA)n Simple_repeat Simple_repeat 3 54 0 198 0 0 0 chr5 163045050 163045072 -36585078 + (CA)n Simple_repeat Simple_repeat 2 23 0 383 74 0 0 chr5 163045072 163045126 -36585024 + MLT2B1 LTR ERVL 467 520 0 326 265 17 68 chr5 163045126 163045243 -36584907 - L3 LINE CR1 -158 1419 1309 247 227 102 45 chr5 163045327 163045415 -36584735 + MIR3 SINE MIR 114 206 -2 473 344 36 4 chr5 163045969 163046222 -36583928 - MIR SINE MIR 0 262 2 23 33 0 0 chr5 163046224 163046254 -36583896 + AT_rich Low_complexity Low_complexity 1 30 0 196 224 0 60 chr5 163046389 163046456 -36583694 + L2 LINE L2 3179 3241 -72 23 68 0 0 chr5 163047312 163047356 -36582794 + AT_rich Low_complexity Low_complexity 1 44 0 444 283 239 0 chr5 163047583 163047742 -36582408 - MIR SINE MIR -38 224 28 389 264 104 0 chr5 163048873 163048979 -36581171 - MIR3 SINE MIR -52 156 40 234 290 57 16 chr5 163049209 163049333 -36580817 + MER113 DNA MER1_type? 7 135 -386 317 258 109 16 chr5 163049899 163050027 -36580123 - L2 LINE L2 -13 3300 3161 3498 154 21 33 chr5 163050130 163050226 -36579924 - MER6A DNA MER2_type -260 605 509 1711 186 3 3 chr5 163050226 163050522 -36579628 - AluJo SINE Alu -16 296 1 3498 154 21 33 chr5 163050522 163051037 -36579113 - MER6A DNA MER2_type -356 509 1 321 26 0 0 chr5 163051931 163051969 -36578181 + (TC)n Simple_repeat Simple_repeat 1 38 0 402 305 75 58 chr5 163052238 163052464 -36577686 - MIR SINE MIR -12 250 21 22 35 0 0 chr5 163053309 163053338 -36576812 + AT_rich Low_complexity Low_complexity 1 29 0 288 314 14 0 chr5 163053373 163053443 -36576707 - MER2 DNA MER2_type -3 342 272 10706 173 28 15 chr5 163053453 163055950 -36574200 + L1PA12 LINE L1 1 2286 -5295 1564 122 39 0 chr5 163055950 163056180 -36573970 + L1PA14 LINE L1 5914 6152 -9 10706 173 28 15 chr5 163056180 163056199 -36573951 + L1PA12 LINE L1 2286 2303 -5278 845 146 7 21 chr5 163056234 163056378 -36573772 + L1MA5A LINE L1 6151 6292 -5 1202 166 5 33 chr5 163056394 163056605 -36573545 - MER2 DNA MER2_type -139 206 2 309 151 0 0 chr5 163056614 163056667 -36573483 + (TG)n Simple_repeat Simple_repeat 2 54 0 203 367 129 14 chr5 163056669 163056808 -36573342 + MIR3 SINE MIR 2 156 -52 327 319 111 15 chr5 163056944 163057079 -36573071 + L2 LINE L2 3125 3272 0 1713 217 84 32 chr5 163057654 163058096 -36572054 - MLT1C LTR MaLR -2 465 1 1735 177 32 91 chr5 163058106 163058512 -36571638 - MLT1C-int LTR MaLR -10 1361 980 384 259 67 26 chr5 163058555 163058792 -36571358 + L1MC/D LINE L1 5182 5429 -743 496 273 42 12 chr5 163058806 163059030 -36571120 + L1MC/D LINE L1 5543 5794 -368 332 253 22 90 chr5 163059345 163059523 -36570627 + HAL1 LINE L1 1 166 -2341 478 245 75 37 chr5 163059615 163059803 -36570347 + HAL1 LINE L1 2306 2500 -7 1019 217 132 32 chr5 163061094 163061424 -36568726 - MLT1A1 LTR MaLR 0 365 1 470 303 20 13 chr5 163061963 163062115 -36568035 + MER5B DNA MER1_type 2 154 -24 899 218 57 20 chr5 163062708 163062990 -36567160 + LTR16A LTR ERVL 121 444 -6 446 286 136 14 chr5 163063132 163063345 -36566805 - L3 LINE CR1 -470 1107 869 205 216 0 39 chr5 163063808 163063859 -36566291 - MIR3 SINE MIR -9 199 151 185 333 161 11 chr5 163064107 163064194 -36565956 - MIR SINE MIR -90 118 19 362 239 35 9 chr5 163064953 163065066 -36565084 - MIR3 SINE MIR -16 192 77 234 252 71 103 chr5 163065584 163065739 -36564411 - MIR SINE MIR -78 184 35 440 191 38 61 chr5 163065958 163066089 -36564061 + MIR SINE MIR 85 212 -50 220 268 0 36 chr5 163066449 163066505 -36563645 - MIR SINE MIR -122 86 33 185 275 25 25 chr5 163066636 163066716 -36563434 + L3 LINE CR1 1234 1313 -264 276 328 17 17 chr5 163067011 163067127 -36563023 + MIR SINE MIR 8 123 -139 359 273 11 0 chr5 163068074 163068162 -36561988 - MIR SINE MIR -41 221 133 956 306 65 36 chr5 163068274 163068874 -36561276 - L2 LINE L2 -1 3312 2675 487 250 21 14 chr5 163069165 163069309 -36560841 + MER103 DNA DNA 22 166 0 355 272 15 15 chr5 163069544 163069680 -36560470 + Charlie7 DNA MER1_type 13 148 -2464 201 175 0 0 chr5 163070139 163070179 -36559971 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 2103 148 3 0 chr5 163070403 163070714 -36559436 + AluJb SINE Alu 1 312 0 247 258 31 41 chr5 163070724 163070821 -36559329 - L1ME4a LINE L1 -20 6101 6006 255 286 0 0 chr5 163071077 163071133 -36559017 + MER96B DNA MER1_type? 1 56 -361 * 574 148 114 81 chr5 163071125 163071335 -36558815 - MER96B DNA MER1_type? -119 298 82 402 294 50 31 chr5 163071412 163071572 -36558578 + MIR3 SINE MIR 3 165 -43 352 319 24 35 chr5 163071622 163071791 -36558359 + MIR3 SINE MIR 33 199 -9 274 139 28 56 chr5 163072332 163072404 -36557746 + MER96B DNA MER1_type? 229 298 -119 444 307 57 9 chr5 163072707 163072919 -36557231 + L3 LINE CR1 795 1016 -561 1761 175 73 20 chr5 163073030 163073385 -36556765 + MLT1C LTR MaLR 5 378 -89 181 261 43 0 chr5 163073475 163073521 -36556629 + L2 LINE L2 3204 3251 -21 2227 113 0 0 chr5 163073525 163073827 -36556323 - AluSx SINE Alu -10 302 1 209 348 34 0 chr5 163073976 163074065 -36556085 - MIR3 SINE MIR -8 200 109 464 296 132 16 chr5 163074310 163074499 -36555651 - MIR SINE MIR -50 212 2 373 328 49 8 chr5 163074553 163074675 -36555475 + MIR3 SINE MIR 33 159 -49 989 267 29 19 chr5 163074726 163075041 -36555109 - L2 LINE L2 0 3313 2996 186 342 163 56 chr5 163075538 163075734 -36554416 + L2 LINE L2 2546 2762 -552 480 218 37 0 chr5 163075735 163075846 -36554304 + L1ME1 LINE L1 6064 6184 0 717 284 56 10 chr5 163075930 163076127 -36554023 + MIR SINE MIR 46 251 -11 2356 171 27 66 chr5 163076180 163076664 -36553486 - MLT1C LTR MaLR -2 465 1 235 300 113 107 chr5 163076688 163077025 -36553125 + L2 LINE L2 2934 3272 0 448 323 62 0 chr5 163077129 163077324 -36552826 - LTR33A LTR ERVL -2 521 315 322 258 86 0 chr5 163077797 163077890 -36552260 - LTR50 LTR ERVL -694 101 1 331 343 44 10 chr5 163077929 163078071 -36552079 + MIR3 SINE MIR 35 180 -28 465 242 124 50 chr5 163078561 163078722 -36551428 + MIR SINE MIR 40 212 -50 244 187 93 13 chr5 163078789 163078864 -36551286 + L1ME3A LINE L1 6090 6170 0 275 235 47 12 chr5 163079063 163079148 -36551002 - L1ME4a LINE L1 -12 6109 6022 595 278 79 88 chr5 163079354 163079671 -36550479 - Charlie8 DNA MER1_type -2135 282 1 226 225 42 14 chr5 163080217 163080288 -36549862 + L3 LINE CR1 1188 1260 -317 203 268 158 0 chr5 163080864 163080946 -36549204 - MIR SINE MIR -10 252 158 228 226 0 38 chr5 163080946 163080999 -36549151 - MLT1G1 LTR MaLR 0 595 545 * 665 242 33 166 chr5 163080987 163081289 -36548861 - MLT1G LTR MaLR -258 337 45 443 269 64 51 chr5 163081323 163081483 -36548667 - MIR SINE MIR -36 172 11 368 312 32 7 chr5 163081534 163081688 -36548462 + MIR3 SINE MIR 44 201 -7 331 272 22 11 chr5 163082134 163082226 -36547924 + L2 LINE L2 3164 3256 -16 280 366 49 0 chr5 163082513 163082636 -36547514 + MIR SINE MIR 25 153 -55 1144 135 87 0 chr5 163083844 163084029 -36546121 + AluJb SINE Alu 85 285 -27 1752 340 80 415 chr5 163084041 163084120 -36546030 - L1MC1 LINE L1 -8 6325 6221 201 39 0 0 chr5 163084120 163084146 -36546004 + (CA)n Simple_repeat Simple_repeat 1 26 0 1752 340 80 415 chr5 163084146 163084525 -36545625 - L1MC1 LINE L1 -112 6221 5717 16296 147 38 45 chr5 163084525 163086390 -36543760 - Tigger3(Golem) DNA MER2_type -1 3028 1151 2583 27 3 0 chr5 163086390 163086687 -36543463 - AluY SINE Alu -13 298 1 16296 147 38 45 chr5 163086687 163087774 -36542376 - Tigger3(Golem) DNA MER2_type -1878 1151 96 2502 62 0 13 chr5 163087774 163088079 -36542071 - AluY SINE Alu -10 301 1 16296 147 38 45 chr5 163088079 163088173 -36541977 - Tigger3(Golem) DNA MER2_type -2933 96 3 1752 340 80 415 chr5 163088173 163088445 -36541705 - L1MC1 LINE L1 -616 5717 5665 641 247 17 61 chr5 163088435 163088666 -36541484 - L1MC/D LINE L1 -2002 5806 5586 * 242 348 57 37 chr5 163089302 163089546 -36540604 + L2 LINE L2 2811 3059 -213 437 341 82 25 chr5 163089785 163090149 -36540001 - L1MC4a LINE L1 -1876 5932 5548 203 344 11 33 chr5 163090484 163090574 -36539576 + L2 LINE L2 3141 3228 -44 285 51 0 0 chr5 163090591 163090630 -36539520 + (TG)n Simple_repeat Simple_repeat 2 40 0 450 309 74 43 chr5 163090960 163091190 -36538960 + MIR SINE MIR 12 248 -14 348 275 153 8 chr5 163091258 163091389 -36538761 - MIR3 SINE MIR -35 173 24 734 255 33 28 chr5 163091794 163092006 -36538144 - MIR SINE MIR -7 255 43 398 264 147 6 chr5 163092008 163092171 -36537979 + LTR16A1 LTR ERVL 264 449 -8 213 121 0 0 chr5 163092335 163092368 -36537782 + (ATG)n Simple_repeat Simple_repeat 2 34 0 283 259 28 65 chr5 163092831 163092939 -36537211 - MIR SINE MIR -139 123 20 1385 203 86 75 chr5 163093002 163093466 -36536684 - MER113 DNA MER1_type? -43 478 10 474 325 78 6 chr5 163093607 163093773 -36536377 - MIR3 SINE MIR -21 187 10 941 102 0 37 chr5 163093789 163093976 -36536174 + (TA)n Simple_repeat Simple_repeat 1 180 0 332 208 10 42 chr5 163093989 163094085 -36536065 + L1MC4 LINE L1 6614 6706 -1336 248 188 0 0 chr5 163094088 163094136 -36536014 - LTR66 LTR ERVL -171 439 392 485 201 138 44 chr5 163094207 163094366 -36535784 + MER105 DNA DNA 31 204 0 194 343 0 0 chr5 163094423 163094493 -36535657 - L3b LINE CR1 -218 1365 1296 408 354 19 0 chr5 163094513 163094671 -36535479 - L3 LINE CR1 -1188 389 229 368 317 147 19 chr5 163094647 163094906 -36535244 + L3 LINE CR1 1083 1374 -203 * 198 139 0 47 chr5 163095289 163095332 -36534818 - MIR SINE MIR -39 223 183 234 348 9 17 chr5 163095869 163095984 -36534166 + MIR3 SINE MIR 89 202 -6 7140 61 1 14 chr5 163096144 163096824 -36533326 - L1PA7 LINE L1 0 6154 5497 2093 124 7 0 chr5 163096824 163097114 -36533036 - AluSx SINE Alu -20 292 1 7140 61 1 14 chr5 163097114 163097680 -36532470 - L1PA7 LINE L1 -657 5497 4925 452 282 77 11 chr5 163098555 163098736 -36531414 + MIR SINE MIR 16 208 -54 1499 108 0 5 chr5 163098998 163099212 -36530938 - AluSg/x SINE Alu 0 301 89 333 214 14 0 chr5 163099269 163099339 -36530811 - MER116 DNA Mariner -6 74 4 214 171 0 24 chr5 163100311 163100352 -36529798 + G-rich Low_complexity Low_complexity 5 44 0 907 204 90 0 chr5 163103119 163103320 -36526830 - MER20 DNA MER1_type 0 219 1 268 255 159 0 chr5 163104149 163104294 -36525856 - MIR3 SINE MIR -11 197 30 181 216 0 0 chr5 163105114 163105151 -36524999 - L2 LINE L2 -6 3307 3271 580 256 26 6 chr5 163105278 163105434 -36524716 - MIR SINE MIR -79 183 25 417 286 163 63 chr5 163106347 163106710 -36523440 + L3 LINE CR1 1171 1569 -8 400 298 19 6 chr5 163107149 163107307 -36522843 + MIR3 SINE MIR 38 197 -11 386 219 82 64 chr5 163107368 163107601 -36522549 - L1ME4a LINE L1 -1 6120 5884 415 254 9 18 chr5 163107715 163107829 -36522321 - MER5A DNA MER1_type -70 119 7 391 312 113 6 chr5 163108149 163108385 -36521765 - MIR SINE MIR 0 262 8 320 313 15 15 chr5 163109652 163109783 -36520367 - MER5A DNA MER1_type -50 139 9 204 313 0 0 chr5 163110319 163110383 -36519767 + (CA)n Simple_repeat Simple_repeat 2 65 0 2016 146 33 36 chr5 163110717 163111080 -36519070 + THE1B LTR MaLR 1 362 -2 323 360 40 49 chr5 163111086 163111618 -36518532 - L2 LINE L2 -20 3252 2728 2323 107 3 3 chr5 163111727 163112035 -36518115 - AluSq SINE Alu -5 308 1 1555 131 10 93 chr5 163112993 163113305 -36516845 - AluJo SINE Alu -3 309 24 303 320 96 39 chr5 163113592 163113748 -36516402 - MIR SINE MIR -50 212 48 353 244 61 46 chr5 163114568 163114699 -36515451 - L2 LINE L2 0 3313 3181 1028 144 11 11 chr5 163115026 163115214 -36514936 + MER53 DNA DNA 2 189 0 394 246 23 31 chr5 163115430 163115560 -36514590 - MER103 DNA DNA -16 150 22 622 282 131 8 chr5 163115679 163115924 -36514226 + L3 LINE CR1 1235 1509 -68 386 298 19 74 chr5 163116331 163116546 -36513604 + MIR SINE MIR 54 256 -6 235 231 248 26 chr5 163116760 163116877 -36513273 + MIR3 SINE MIR 12 154 -54 1085 74 22 0 chr5 163116877 163117012 -36513138 + AluY SINE Alu 159 296 -15 210 383 0 0 chr5 163117140 163117221 -36512929 + (TG)n Simple_repeat Simple_repeat 1 81 0 215 211 19 19 chr5 163117859 163117911 -36512239 + MIR SINE MIR 99 150 -58 264 157 10 49 chr5 163118435 163118507 -36511643 - MIR3 SINE MIR -28 180 112 460 281 152 49 chr5 163118721 163119130 -36511020 + L2 LINE L2 2862 3312 -1 496 251 107 28 chr5 163119136 163119463 -36510687 - L1ME4a LINE L1 -22 6099 5747 343 301 55 14 chr5 163119869 163120015 -36510135 - MIR3 SINE MIR -3 205 54 404 253 52 23 chr5 163120220 163120394 -36509756 - Charlie7 DNA MER1_type -3 2609 2431 232 323 52 0 chr5 163120383 163120479 -36509671 - Charlie7 DNA MER1_type -2511 101 1 * 433 279 34 17 chr5 163120485 163120664 -36509486 - MER112 DNA MER1_type -4 256 75 3886 107 37 58 chr5 163120683 163121385 -36508765 - Tigger3(Golem) DNA MER2_type -63 2966 2280 703 185 0 0 chr5 163121378 163121486 -36508664 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 266 225 110 81 chr5 163121630 163121726 -36508424 - MIR SINE MIR -73 189 84 2008 70 0 4 chr5 163121726 163121967 -36508183 + AluY SINE Alu 57 296 -15 266 225 110 81 chr5 163121967 163122043 -36508107 - MIR SINE MIR -178 84 12 275 0 29 0 chr5 163122136 163122171 -36507979 + (TTCC)n Simple_repeat Simple_repeat 3 38 0 410 294 82 7 chr5 163122295 163122441 -36507709 - MIR3 SINE MIR -24 184 28 335 291 7 64 chr5 163122765 163122906 -36507244 + L2 LINE L2 3181 3313 0 2070 161 12 61 chr5 163122921 163123330 -36506820 - MLT1B LTR MaLR -1 389 1 188 300 62 0 chr5 163123549 163123629 -36506521 - MIR SINE MIR -1 261 177 314 236 14 0 chr5 163123834 163123906 -36506244 - LTR33A LTR ERVL -4 519 447 407 275 38 0 chr5 163123906 163124037 -36506113 - MIR SINE MIR -109 153 18 645 223 32 6 chr5 163124382 163124539 -36505611 - MIR3 SINE MIR -41 167 7 220 186 23 0 chr5 163124912 163124955 -36505195 - L2 LINE L2 -14 3258 3215 1338 255 128 4 chr5 163125118 163125580 -36504570 - LTR33A LTR ERVL -4 519 1 227 309 91 9 chr5 163125597 163125707 -36504443 + MIR SINE MIR 85 203 -59 2322 113 0 3 chr5 163126598 163126909 -36503241 - AluSx SINE Alu -2 310 1 671 330 96 48 chr5 163127435 163128067 -36502083 - L2 LINE L2 -20 3252 2601 222 62 0 0 chr5 163128068 163128100 -36502050 + (TCTA)n Simple_repeat Simple_repeat 4 35 0 183 170 0 0 chr5 163128118 163128165 -36501985 + (TA)n Simple_repeat Simple_repeat 2 48 0 266 319 51 19 chr5 163128279 163128436 -36501714 - L2 LINE L2 -743 2571 2410 613 173 10 0 chr5 163128626 163128730 -36501420 + MER20 DNA MER1_type 113 217 -2 513 238 92 37 chr5 163129194 163129358 -36500792 - MER5B DNA MER1_type -3 175 3 512 249 260 15 chr5 163129369 163129515 -36500635 - MER102b DNA MER1_type -1093 335 226 329 0 24 0 chr5 163129515 163129556 -36500594 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 512 249 260 15 chr5 163129556 163129678 -36500472 - MER102b DNA MER1_type -1202 226 1 410 255 102 19 chr5 163129939 163130096 -36500054 + MER20 DNA MER1_type 27 196 -23 2547 75 0 0 chr5 163130809 163131114 -36499036 - AluY SINE Alu -6 305 1 248 282 70 14 chr5 163131224 163131295 -36498855 - MER5A DNA MER1_type -1 188 114 756 234 101 27 chr5 163131500 163131688 -36498462 + MER63A DNA MER1_type 1 202 -8 346 338 45 12 chr5 163131855 163132063 -36498087 + MIR SINE MIR 41 255 -7 220 276 82 41 chr5 163132791 163132889 -36497261 + MIR SINE MIR 59 160 -102 258 136 0 0 chr5 163133429 163133473 -36496677 + (T)n Simple_repeat Simple_repeat 1 44 0 192 271 51 17 chr5 163134022 163134081 -36496069 - MIR SINE MIR -155 107 47 202 282 26 39 chr5 163134220 163134298 -36495852 - MIR3 SINE MIR -31 177 101 825 236 11 6 chr5 163134747 163134921 -36495229 - MER20 DNA MER1_type -20 199 25 1939 168 21 37 chr5 163134926 163135306 -36494844 - THE1C LTR MaLR 0 375 2 1699 221 77 73 chr5 163135566 163136083 -36494067 - MLT2B1 LTR ERVL 0 520 2 396 81 145 0 chr5 163136085 163136147 -36494003 + AluSq SINE Alu 1 71 -232 1611 130 0 0 chr5 163136500 163136731 -36493419 + AluSq SINE Alu 73 303 -10 251 265 78 10 chr5 163137373 163137475 -36492675 - MIR3 SINE MIR -47 161 53 448 219 323 0 chr5 163137802 163137966 -36492184 + Charlie8 DNA MER1_type 1 217 -2200 230 313 39 16 chr5 163138773 163138901 -36491249 + MIR3 SINE MIR 30 160 -48 665 231 15 39 chr5 163139336 163139539 -36490611 + MIR SINE MIR 17 214 -48 267 103 0 0 chr5 163139571 163139610 -36490540 + (CAT)n Simple_repeat Simple_repeat 1 39 0 209 194 0 0 chr5 163140321 163140357 -36489793 + MIR SINE MIR 211 246 -16 195 244 0 0 chr5 163140395 163140440 -36489710 + L2 LINE L2 3261 3305 -8 216 344 101 32 chr5 163140500 163140689 -36489461 - L2 LINE L2 -219 3053 2852 498 248 7 21 chr5 163141301 163141442 -36488708 + MIR SINE MIR 49 187 -75 21 36 0 0 chr5 163141489 163141517 -36488633 + AT_rich Low_complexity Low_complexity 1 28 0 335 290 40 81 chr5 163141588 163141836 -36488314 - Charlie8 DNA MER1_type -2179 238 1 600 14 0 0 chr5 163142273 163142342 -36487808 + (TG)n Simple_repeat Simple_repeat 2 70 0 334 290 124 0 chr5 163143831 163143976 -36486174 + MIR SINE MIR 33 195 -67 195 246 0 77 chr5 163144102 163144167 -36485983 + MIR SINE MIR 183 242 -20 225 335 135 12 chr5 163144247 163144417 -36485733 + MIR3 SINE MIR 16 206 -2 329 248 35 35 chr5 163144528 163144641 -36485509 - Charlie8 DNA MER1_type -1890 527 415 470 281 25 35 chr5 163144677 163144880 -36485270 - Charlie8 DNA MER1_type -2155 262 62 198 330 55 11 chr5 163145186 163145277 -36484873 - MER5A DNA MER1_type -28 161 67 526 277 18 59 chr5 163146058 163146296 -36483854 + MIR SINE MIR 2 236 -26 481 291 20 59 chr5 163146487 163146690 -36483460 + MIR3 SINE MIR 11 205 -3 203 250 0 0 chr5 163147016 163147060 -36483090 + L2 LINE L2 2996 3039 -274 361 283 38 0 chr5 163147206 163147312 -36482838 + L2 LINE L2 3194 3303 -10 258 32 0 0 chr5 163147323 163147354 -36482796 + (A)n Simple_repeat Simple_repeat 1 31 0 233 293 13 40 chr5 163148671 163148746 -36481404 + MIR SINE MIR 120 192 -70 801 206 88 15 chr5 163148879 163149083 -36481067 + MIR SINE MIR 6 224 -38 795 222 24 12 chr5 163149213 163149484 -36480666 + Charlie1a DNA MER1_type 8 324 -1131 * 4574 186 43 8 chr5 163149480 163150426 -36479724 + Charlie1a DNA MER1_type 477 1455 0 333 322 55 55 chr5 163150488 163150671 -36479479 + L3 LINE CR1 1018 1200 -377 2089 123 0 3 chr5 163150684 163150977 -36479173 + AluSx SINE Alu 1 292 -20 2139 107 0 0 chr5 163150983 163151299 -36478851 + AluY SINE Alu 1 316 0 3130 78 0 8 chr5 163151299 163151695 -36478455 + L1PA8 LINE L1 5780 6172 0 200 222 37 0 chr5 163151737 163151791 -36478359 + L3 LINE CR1 1218 1273 -304 291 253 22 33 chr5 163151921 163152012 -36478138 + CT-rich Low_complexity Low_complexity 1 90 0 350 265 10 10 chr5 163152099 163152197 -36477953 + GA-rich Low_complexity Low_complexity 2 99 0 21 0 0 0 chr5 163152448 163152469 -36477681 + AT_rich Low_complexity Low_complexity 1 21 0 460 290 35 35 chr5 163152482 163152765 -36477385 + L1ME4a LINE L1 5629 5911 -210 187 329 123 27 chr5 163152765 163152911 -36477239 - L2 LINE L2 -4 3309 3150 307 278 98 0 chr5 163152956 163153089 -36477061 + L1ME4a LINE L1 5967 6112 -9 617 270 102 10 chr5 163153379 163153575 -36476575 - MIR SINE MIR -28 234 21 226 291 25 13 chr5 163153629 163153708 -36476442 - L2 LINE L2 -188 3084 3005 1401 310 106 47 chr5 163153787 163154863 -36475287 - L2 LINE L2 -453 2861 1723 25 31 0 0 chr5 163155100 163155132 -36475018 + AT_rich Low_complexity Low_complexity 1 32 0 718 219 78 31 chr5 163155136 163155328 -36474822 - MIR SINE MIR -6 256 56 727 274 139 7 chr5 163156099 163156616 -36473534 - MLT2E LTR ERVL 0 628 6 236 284 144 54 chr5 163156904 163157189 -36472961 + L2 LINE L2 2898 3311 -2 180 111 0 0 chr5 163157191 163157218 -36472932 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 2234 117 0 0 chr5 163157388 163157688 -36472462 - AluSg SINE Alu -10 300 1 541 327 30 56 chr5 163157807 163158073 -36472077 - MIR SINE MIR 0 262 4 654 298 27 35 chr5 163158097 163158355 -36471795 - MIR SINE MIR -3 259 4 274 309 65 78 chr5 163159145 163159198 -36470952 - L2 LINE L2 -181 3091 3039 2493 129 8 21 chr5 163159198 163159578 -36470572 - THE1C LTR MaLR 0 375 1 274 309 65 78 chr5 163159578 163159741 -36470409 - L2 LINE L2 -233 3039 2878 1052 249 127 32 chr5 163159842 163160303 -36469847 + MLT1G1 LTR MaLR 3 586 -9 357 293 21 14 chr5 163160370 163160510 -36469640 + MIR SINE MIR 122 262 0 268 347 52 10 chr5 163160540 163160733 -36469417 - L2 LINE L2 -684 2630 2430 601 293 119 95 chr5 163160749 163161319 -36468831 + MLT1K LTR MaLR 5 588 0 720 248 67 26 chr5 163161493 163162147 -36468003 + L1ME3A LINE L1 5394 6170 0 183 286 118 83 chr5 163162685 163163024 -36467126 + L2 LINE L2 2539 2889 -425 243 0 0 0 chr5 163163618 163163645 -36466505 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7317 62 18 3 chr5 163163647 163165137 -36465013 - L1PA7 LINE L1 -2 6152 4656 548 188 81 25 chr5 163165241 163165401 -36464749 + Charlie7 DNA MER1_type 2444 2612 0 323 253 13 0 chr5 163165599 163165678 -36464472 - MIR SINE MIR -10 252 173 664 92 20 0 chr5 163165691 163165789 -36464361 + L1PB1 LINE L1 3 102 -6761 14510 183 38 23 chr5 163165795 163169687 -36460463 + L1PB1 LINE L1 995 5143 -1724 225 0 0 0 chr5 163169687 163169712 -36460438 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 14510 183 38 23 chr5 163169712 163171464 -36458686 + L1PB1 LINE L1 5143 6867 0 450 231 132 0 chr5 163171473 163171594 -36458556 - MIR SINE MIR -77 185 49 200 143 29 0 chr5 163172830 163172865 -36457285 + (TAA)n Simple_repeat Simple_repeat 3 38 0 301 264 136 14 chr5 163172881 163173021 -36457129 - MIR SINE MIR -52 210 54 25 0 0 0 chr5 163173072 163173097 -36457053 + AT_rich Low_complexity Low_complexity 1 25 0 523 284 44 22 chr5 163173333 163173558 -36456592 + L1ME3 LINE L1 5761 5990 -172 2272 297 118 20 chr5 163173689 163175071 -36455079 - L2 LINE L2 -14 3299 1783 1529 193 8 4 chr5 163175071 163175335 -36454815 + MER66B LTR ERV1 1 265 -221 253 196 0 0 chr5 163175400 163175446 -36454704 - MER66A LTR ERV1 -222 256 211 1300 177 5 0 chr5 163175452 163175661 -36454489 + MER66B LTR ERV1 277 486 0 395 258 59 109 chr5 163175661 163175917 -36454233 - L2 LINE L2 -1528 1786 1544 274 280 254 5 chr5 163176902 163177095 -36453055 + L1M4b LINE L1 1106 1351 -5195 253 350 34 8 chr5 163177432 163177549 -36452601 - L3 LINE CR1 -56 1521 1402 367 352 70 75 chr5 163177634 163178077 -36452073 + L2 LINE L2 2810 3250 -22 199 271 0 17 chr5 163178071 163178130 -36452020 + MIR SINE MIR 175 232 -30 * 194 302 0 0 chr5 163178103 163178156 -36451994 + L2 LINE L2 3210 3262 -10 * 250 336 56 28 chr5 163178161 163178304 -36451846 + MIR3 SINE MIR 39 185 -23 306 264 50 66 chr5 163178828 163178949 -36451201 + MIR SINE MIR 33 151 -57 271 326 112 32 chr5 163179265 163179452 -36450698 + MIR3 SINE MIR 3 204 -4 342 252 75 34 chr5 163180201 163180299 -36449851 - MER103 DNA DNA -11 155 48 207 0 0 0 chr5 163180299 163180322 -36449828 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 342 252 75 34 chr5 163180322 163180370 -36449780 - MER103 DNA DNA -118 48 3 330 344 47 35 chr5 163180613 163180956 -36449194 - L2 LINE L2 0 3313 2967 465 318 67 60 chr5 163181103 163181505 -36448645 - L2 LINE L2 -68 3245 2841 1608 244 77 19 chr5 163181840 163182323 -36447827 + MLT1J LTR MaLR 1 511 0 1715 148 54 0 chr5 163182645 163182922 -36447228 + AluJo SINE Alu 1 292 -20 2702 189 57 12 chr5 163182976 163183537 -36446613 + L1ME1 LINE L1 5576 6161 -5 180 0 0 0 chr5 163183926 163183946 -36446204 + (A)n Simple_repeat Simple_repeat 1 20 0 247 282 87 0 chr5 163183970 163184073 -36446077 - MER5C DNA MER1_type -212 112 1 236 290 43 14 chr5 163186059 163186128 -36444022 + MER81 DNA DNA 36 106 -8 367 203 220 0 chr5 163186128 163186246 -36443904 - MIR3 SINE MIR -31 177 34 243 184 105 40 chr5 163186496 163186572 -36443578 - L1M3d LINE L1 -5128 763 683 185 356 107 34 chr5 163187623 163187772 -36442378 + MIR SINE MIR 10 169 -93 846 268 68 8 chr5 163187803 163188038 -36442112 + MIR SINE MIR 1 249 -13 237 222 0 0 chr5 163188006 163188051 -36442099 + L2 LINE L2 3263 3307 -6 * 423 0 0 0 chr5 163188357 163188404 -36441746 + (CA)n Simple_repeat Simple_repeat 2 48 0 547 254 0 9 chr5 163188478 163188592 -36441558 - MIR SINE MIR -75 133 21 323 321 9 0 chr5 163189123 163189232 -36440918 - MIR3 SINE MIR -15 193 84 187 267 218 30 chr5 163189603 163189704 -36440446 + L3b LINE CR1 1334 1453 -130 801 264 60 44 chr5 163190527 163190777 -36439373 - MIR SINE MIR -6 256 3 245 341 121 15 chr5 163190959 163191091 -36439059 - L2 LINE L2 -1 3271 3126 436 295 26 63 chr5 163191164 163191354 -36438796 + MIR SINE MIR 1 183 -79 421 229 58 114 chr5 163191619 163191972 -36438178 + L1MC4a LINE L1 5665 6027 -94 12246 41 1 1 chr5 163192006 163194184 -36435966 - L1PA5 LINE L1 0 6154 3976 33 25 0 0 chr5 163194213 163194253 -36435897 + AT_rich Low_complexity Low_complexity 1 40 0 201 213 33 16 chr5 163195228 163195289 -36434861 + GA-rich Low_complexity Low_complexity 4 65 0 1987 135 0 14 chr5 163195843 163196140 -36434010 - AluSx SINE Alu -18 294 2 184 358 104 0 chr5 163196259 163196326 -36433824 + L2 LINE L2 3186 3259 -13 604 272 12 0 chr5 163196956 163197118 -36433032 - MER103 DNA DNA -1 165 2 959 164 26 11 chr5 163197233 163197422 -36432728 - MSTD-int LTR MaLR -1542 193 2 1022 189 42 76 chr5 163197424 163197757 -36432393 - MSTD LTR MaLR 0 396 1 1306 192 8 4 chr5 163197757 163198018 -36432132 - L1 LINE L1 -810 5336 5075 213 333 33 22 chr5 163198161 163198251 -36431899 + MIR3 SINE MIR 112 202 -6 24 53 0 0 chr5 163198302 163198340 -36431810 + AT_rich Low_complexity Low_complexity 1 38 0 911 259 22 9 chr5 163198342 163198566 -36431584 - MIR SINE MIR -7 255 29 491 326 125 13 chr5 163198939 163199331 -36430819 - L3 LINE CR1 -2 1575 1140 205 355 13 0 chr5 163199647 163199723 -36430427 + L2 LINE L2 3194 3270 -2 638 249 31 16 chr5 163199791 163199984 -36430166 - MIR SINE MIR -49 213 18 298 313 145 43 chr5 163200460 163200984 -36429166 + L2 LINE L2 2649 3220 -52 383 298 28 21 chr5 163201017 163201158 -36428992 + MIR3 SINE MIR 53 194 -14 285 233 22 11 chr5 163202056 163202146 -36428004 + MIR SINE MIR 2 92 -170 500 250 79 7 chr5 163202934 163203086 -36427064 + MIR SINE MIR 100 262 0 231 197 118 79 chr5 163203451 163203530 -36426620 - L2 LINE L2 0 3313 3226 2107 73 0 0 chr5 163203530 163203789 -36426361 + AluY SINE Alu 32 290 -21 231 197 118 79 chr5 163203789 163203836 -36426314 - L2 LINE L2 -87 3226 3182 205 239 220 28 chr5 163204305 163204414 -36425736 + MIR SINE MIR 20 149 -59 254 321 14 60 chr5 163204952 163205023 -36425127 + MIR SINE MIR 53 126 -136 1492 110 7 48 chr5 163205023 163205295 -36424855 - L1MA4A LINE L1 0 6303 6043 254 321 14 60 chr5 163205295 163205441 -36424709 + MIR SINE MIR 126 260 -2 494 236 8 21 chr5 163205448 163205821 -36424329 + CT-rich Low_complexity Low_complexity 1 368 0 200 348 0 11 chr5 163205834 163205926 -36424224 + CT-rich Low_complexity Low_complexity 1 91 0 224 324 40 47 chr5 163206056 163206204 -36423946 + L3 LINE CR1 68 214 -1363 205 343 37 9 chr5 163206457 163206565 -36423585 + MIR SINE MIR 25 135 -127 * 529 276 51 62 chr5 163206560 163206835 -36423315 - L2 LINE L2 0 3313 3042 773 204 18 77 chr5 163206857 163207078 -36423072 - MER20 DNA MER1_type -11 208 1 468 306 120 14 chr5 163207082 163207298 -36422852 + MIR SINE MIR 21 259 -3 2229 169 38 24 chr5 163207376 163207802 -36422348 + MSTB1 LTR MaLR 1 432 0 442 346 65 34 chr5 163208815 163209078 -36421072 - L2 LINE L2 -13 3259 2989 320 281 182 16 chr5 163209249 163209491 -36420659 + LTR16A LTR ERVL 90 371 -79 207 281 7 14 chr5 163210792 163210912 -36419238 + MIR SINE MIR 72 189 -73 485 278 80 42 chr5 163210969 163211181 -36418969 - MIR SINE MIR -38 224 5 915 212 72 43 chr5 163211288 163211748 -36418402 + MLT1E2 LTR MaLR 1 505 0 429 54 0 0 chr5 163212188 163212244 -36417906 + (TC)n Simple_repeat Simple_repeat 1 56 0 182 36 0 36 chr5 163212439 163212467 -36417683 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 782 152 60 7 chr5 163213193 163213344 -36416806 + MER5A DNA MER1_type 7 165 -24 484 157 38 33 chr5 163213388 163213497 -36416653 + MLT1I LTR MaLR 317 409 0 * 1004 291 67 6 chr5 163213497 163213839 -36416311 + MER113 DNA MER1_type? 154 516 -5 407 243 9 18 chr5 163213850 163213961 -36416189 - MIR SINE MIR -56 152 43 275 154 19 0 chr5 163214257 163214309 -36415841 - MLT1D LTR MaLR 0 505 453 597 218 67 21 chr5 163214365 163214630 -36415520 - MLT1D LTR MaLR -142 325 35 438 200 52 52 chr5 163214684 163214819 -36415331 + MIR3 SINE MIR 55 189 -19 517 315 38 21 chr5 163215397 163215635 -36414515 + L1MC/D LINE L1 5455 5696 -2112 632 236 127 6 chr5 163215639 163215804 -36414346 + LTR33A LTR ERVL 1 185 -338 890 227 36 9 chr5 163215843 163216068 -36414082 + LTR33A LTR ERVL 291 521 -2 43618 33 22 1 chr5 163216134 163222148 -36408002 + L1PA2 LINE L1 13 6152 -3 265 239 54 33 chr5 163222219 163222311 -36407839 + MER113 DNA MER1_type? 278 371 -150 200 299 30 0 chr5 163222402 163222469 -36407681 - MIR3 SINE MIR -53 155 87 286 345 18 9 chr5 163223138 163223248 -36406902 + MIR SINE MIR 149 259 -3 216 374 148 0 chr5 163223243 163223425 -36406725 + L2 LINE L2 2842 3050 -222 * 559 299 40 0 chr5 163223541 163223742 -36406408 - MIR SINE MIR -3 259 51 198 265 29 0 chr5 163224371 163224439 -36405711 - MIR SINE MIR -32 230 161 370 245 63 4 chr5 163224491 163224640 -36405510 - MIR SINE MIR -67 141 5 1782 222 24 4 chr5 163224804 163225178 -36404972 + MLT2D LTR ERVL 1 479 -41 817 182 28 0 chr5 163225478 163225621 -36404529 - FRAM SINE Alu -21 155 9 265 297 122 11 chr5 163225742 163225910 -36404240 + MIR SINE MIR 1 188 -74 282 313 10 0 chr5 163226601 163226697 -36403453 + MIR3 SINE MIR 64 160 -48 199 182 23 0 chr5 163226952 163226996 -36403154 + MIR3 SINE MIR 150 194 -14 185 299 82 21 chr5 163227172 163227269 -36402881 + MIR SINE MIR 48 150 -112 493 271 181 5 chr5 163227471 163227681 -36402469 - MIR SINE MIR -6 256 10 8194 88 5 1 chr5 163229184 163230251 -36399899 - MER11C LTR ERVK 0 1071 1 522 241 29 29 chr5 163230561 163230731 -36399419 + MER5A DNA MER1_type 18 187 -2 294 336 80 0 chr5 163231224 163231337 -36398813 + L2 LINE L2 3134 3255 -17 237 276 51 10 chr5 163231876 163231974 -36398176 - L2 LINE L2 -27 3286 3185 184 340 58 34 chr5 163232085 163232291 -36397859 - L2 LINE L2 -223 3049 2839 * 224 246 9 91 chr5 163232278 163232388 -36397762 - MIR SINE MIR -97 165 65 471 307 152 10 chr5 163232817 163233205 -36396945 + L2 LINE L2 2830 3272 0 262 313 70 8 chr5 163284020 163284148 -36346002 - L2 LINE L2 -205 3067 2932 428 302 18 18 chr5 163284149 163284318 -36345832 + (TG)n Simple_repeat Simple_repeat 2 170 0 385 337 6 24 chr5 163284364 163284530 -36345620 + (TG)n Simple_repeat Simple_repeat 2 164 0 372 324 17 12 chr5 163284683 163284856 -36345294 - MIR SINE MIR -1 261 88 230 224 20 0 chr5 163285019 163285068 -36345082 + MIR SINE MIR 53 102 -106 322 364 7 0 chr5 163285148 163285302 -36344848 + MIR SINE MIR 94 248 -14 467 251 58 73 chr5 163285344 163285535 -36344615 + MIR SINE MIR 17 204 -58 361 272 96 0 chr5 163286648 163286784 -36343366 - MIR SINE MIR -109 153 5 816 286 26 4 chr5 163287142 163287376 -36342774 + MIR SINE MIR 3 241 -21 574 221 100 135 chr5 163287434 163287864 -36342286 - MLT1L LTR MaLR 0 615 201 1430 118 0 5 chr5 163288150 163288345 -36341805 + AluSg/x SINE Alu 106 299 -11 2476 67 0 0 chr5 163288581 163288878 -36341272 + AluY SINE Alu 1 297 -14 662 215 67 0 chr5 163288971 163289120 -36341030 - MER58A DNA MER1_type -2 222 64 1449 102 0 126 chr5 163289120 163289405 -36340745 - AluSc SINE Alu 0 309 61 203 259 138 43 chr5 163289551 163289667 -36340483 + L2 LINE L2 3181 3307 -6 202 276 0 0 chr5 163291251 163291309 -36338841 + MIR SINE MIR 67 124 -84 988 264 92 48 chr5 163291351 163291557 -36338593 - MER113 DNA MER1_type? -67 454 258 2228 104 0 0 chr5 163291557 163291846 -36338304 - AluSq SINE Alu -24 289 1 988 264 92 48 chr5 163291846 163292074 -36338076 - MER113 DNA MER1_type? -263 258 1 362 310 9 0 chr5 163292178 163292294 -36337856 + L2 LINE L2 3156 3272 0 336 268 41 0 chr5 163292445 163292542 -36337608 + MIR SINE MIR 41 141 -67 328 274 0 0 chr5 163292542 163292626 -36337524 - MER4-int LTR ERV1 -5438 1160 1077 194 392 0 0 chr5 163293520 163293617 -36336533 + MIR SINE MIR 166 262 0 227 186 0 23 chr5 163296347 163296390 -36333760 + CT-rich Low_complexity Low_complexity 1 42 0 373 297 51 23 chr5 163297507 163297682 -36332468 + MER102a DNA MER1_type 1 180 -150 358 274 62 0 chr5 163297687 163297800 -36332350 + MER102a DNA MER1_type 211 330 0 442 164 0 0 chr5 163297840 163297907 -36332243 + MER58A DNA MER1_type 4 70 -37 317 205 15 17 chr5 163297907 163297981 -36332169 + AluS SINE Alu 1 64 -239 1828 65 4 0 chr5 163298507 163298739 -36331411 - L1PA13 LINE L1 -66 6097 5865 539 239 191 20 chr5 163298744 163299095 -36331055 - L1MEc LINE L1 -4129 2267 1857 2799 167 11 15 chr5 163299100 163299638 -36330512 - L1MB8 LINE L1 -6 6172 5637 500 312 8 0 chr5 163299650 163299775 -36330375 - MLT1K LTR MaLR -425 163 38 244 291 55 18 chr5 163299815 163299925 -36330225 - MIR SINE MIR -3 259 146 247 313 96 12 chr5 163299958 163300124 -36330026 - MER102a DNA MER1_type -3 327 148 400 264 196 14 chr5 163300230 163300378 -36329772 + MER5A DNA MER1_type 9 183 -6 296 283 80 44 chr5 163300469 163300582 -36329568 + MER5B DNA MER1_type 61 177 -1 2319 280 77 28 chr5 163300697 163301731 -36328419 + L1ME LINE L1 80 1160 -4920 2334 99 0 3 chr5 163301731 163302033 -36328117 - AluSq SINE Alu -10 303 3 2319 280 77 28 chr5 163302033 163302269 -36327881 + L1ME LINE L1 1160 1383 -4697 439 275 45 22 chr5 163302265 163302443 -36327707 + L1ME LINE L1 2098 2279 -3801 * 915 117 22 186 chr5 163302504 163302735 -36327415 + 7SK RNA RNA 1 193 0 299 277 40 0 chr5 163302782 163302883 -36327267 - MER5B DNA MER1_type -68 110 6 616 189 63 126 chr5 163303308 163303546 -36326604 + MIR SINE MIR 8 230 -32 195 146 0 0 chr5 163304526 163304567 -36325583 + (TG)n Simple_repeat Simple_repeat 2 42 0 238 150 25 0 chr5 163304920 163304960 -36325190 - L1MB1 LINE L1 -6 6162 6122 3488 97 54 153 chr5 163305113 163305494 -36324656 - Tigger3(Golem) DNA MER2_type -1 3028 2611 875 92 0 0 chr5 163305494 163305603 -36324547 + AluSq SINE Alu 129 237 -76 3488 97 54 153 chr5 163305603 163305805 -36324345 - Tigger3(Golem) DNA MER2_type -418 2611 2430 2036 159 128 13 chr5 163305805 163306188 -36323962 + MSTA LTR MaLR 2 428 0 3488 97 54 153 chr5 163306188 163306328 -36323822 - Tigger3(Golem) DNA MER2_type -599 2430 2278 773 138 0 9 chr5 163306319 163306428 -36323722 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 947 114 28 12 chr5 163306953 163307284 -36322866 + CT-rich Low_complexity Low_complexity 1 336 0 1458 162 12 8 chr5 163307315 163307562 -36322588 - AluJo SINE Alu -64 248 1 823 220 50 0 chr5 163307770 163307958 -36322192 + MIR SINE MIR 59 250 -12 24 0 0 0 chr5 163307983 163308007 -36322143 + AT_rich Low_complexity Low_complexity 1 24 0 180 340 142 21 chr5 163309704 163309845 -36320305 - MER5A DNA MER1_type -3 186 29 670 246 92 20 chr5 163309855 163310050 -36320100 - MER63A DNA MER1_type 0 210 2 262 306 31 20 chr5 163310129 163310227 -36319923 + MIR3 SINE MIR 71 169 -39 256 376 29 40 chr5 163310220 163310393 -36319757 - MER5B DNA MER1_type -6 172 2 * 2072 102 0 70 chr5 163310558 163310758 -36319392 - AluSq SINE Alu -17 296 124 6587 37 0 0 chr5 163310758 163311491 -36318659 - L1PA5 LINE L1 -5 6149 5417 2072 102 0 70 chr5 163311491 163311604 -36318546 - AluSq SINE Alu -189 124 5 22 0 0 0 chr5 163311673 163311695 -36318455 + AT_rich Low_complexity Low_complexity 1 22 0 223 259 0 17 chr5 163311720 163311778 -36318372 - L2 LINE L2 -1 3312 3256 744 268 24 5 chr5 163311835 163312048 -36318102 - MIR SINE MIR 0 262 46 337 356 67 13 chr5 163312461 163312686 -36317464 - L2 LINE L2 -250 3063 2827 890 263 41 7 chr5 163312827 163313097 -36317053 - L1ME2 LINE L1 -74 6090 5812 2323 144 12 6 chr5 163313347 163313688 -36316462 - MER2 DNA MER2_type -1 343 1 2410 161 108 30 chr5 163314077 163314549 -36315601 - LTR64 LTR ERVK -2 511 3 1462 199 109 29 chr5 163314610 163314922 -36315228 + MER21B LTR ERV1 1 337 -526 1291 196 148 102 chr5 163315022 163315435 -36314715 + MER21B LTR ERV1 329 846 -85 1319 156 4 41 chr5 163315436 163315688 -36314462 - L1 LINE L1 -768 6080 5837 1272 201 13 72 chr5 163315688 163315992 -36314158 - AluJo SINE Alu -26 286 1 1319 156 4 41 chr5 163315992 163316009 -36314141 - L1 LINE L1 -1011 5837 5821 * 7630 186 16 1 chr5 163315994 163317504 -36312646 - L1 LINE L1 -1734 5114 3582 1630 149 29 0 chr5 163317604 163317919 -36312231 - L1 LINE L1 -4759 2090 1767 6160 163 23 14 chr5 163317938 163318295 -36311855 - L1PB1 LINE L1 -2 6865 6513 213 39 0 0 chr5 163318295 163318321 -36311829 + (TCTA)n Simple_repeat Simple_repeat 3 28 0 6160 163 23 14 chr5 163318321 163319906 -36310244 - L1PB1 LINE L1 -354 6513 4911 * 18147 110 61 12 chr5 163319903 163320531 -36309619 - L1PB1 LINE L1 -3856 3006 2410 2007 136 0 3 chr5 163320531 163320862 -36309288 - AluSx SINE Alu 0 330 1 18147 110 61 12 chr5 163320862 163323098 -36307052 - L1PB1 LINE L1 -4452 2410 1 7067 187 19 99 chr5 163323101 163325050 -36305100 - L1 LINE L1 -5053 1796 5 4579 176 17 42 chr5 163325051 163325596 -36304554 - L1MB8 LINE L1 -40 6138 5581 2381 120 14 22 chr5 163325596 163325954 -36304196 - THE1A LTR MaLR 0 355 1 12572 92 15 0 chr5 163325954 163327511 -36302639 - THE1A-int LTR MaLR 0 1580 1 2406 124 11 8 chr5 163327511 163327865 -36302285 - THE1A LTR MaLR 0 355 1 4579 176 17 42 chr5 163327865 163328342 -36301808 - L1MB8 LINE L1 -594 5584 5142 249 225 33 17 chr5 163329251 163329371 -36300779 + (TTATA)n Simple_repeat Simple_repeat 3 124 0 191 103 26 0 chr5 163329383 163329422 -36300728 + (TA)n Simple_repeat Simple_repeat 1 40 0 2526 157 12 26 chr5 163329796 163330033 -36300117 - MSTA LTR MaLR 0 428 198 2053 110 0 42 chr5 163330033 163330341 -36299809 - AluSx SINE Alu -17 295 1 2526 157 12 26 chr5 163330341 163330530 -36299620 - MSTA LTR MaLR -230 198 8 446 167 0 60 chr5 163331081 163331165 -36298985 + MSTA LTR MaLR 129 207 -221 1031 288 40 24 chr5 163331322 163331745 -36298405 + LTR16A LTR ERVL 21 450 0 1894 162 27 0 chr5 163331907 163332203 -36297947 + AluJb SINE Alu 1 304 -8 344 246 30 22 chr5 163332640 163332748 -36297402 + MER5A DNA MER1_type 4 112 -77 601 183 9 9 chr5 163332767 163332882 -36297268 - MLT1D LTR MaLR 0 505 391 4575 187 19 32 chr5 163334075 163334692 -36295458 - L1MA9 LINE L1 -38 7295 6672 1910 158 10 3 chr5 163334692 163334995 -36295155 - AluJo SINE Alu -6 306 2 4575 187 19 32 chr5 163334995 163335823 -36294327 - L1MA9 LINE L1 -661 6672 5869 * 5740 214 42 64 chr5 163335813 163337185 -36292965 - L1MA9 LINE L1 -2540 4627 3226 399 21 0 0 chr5 163337185 163337233 -36292917 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 5740 214 42 64 chr5 163337233 163337263 -36292887 - L1MA9 LINE L1 -3941 3226 3197 663 240 0 8 chr5 163337263 163337388 -36292762 - FLAM_A SINE Alu -9 124 1 5740 214 42 64 chr5 163337388 163338372 -36291778 - L1MA9 LINE L1 -3970 3197 2193 18503 38 2 0 chr5 163338372 163341261 -36288889 - L1PA4 LINE L1 0 6155 3263 5740 214 42 64 chr5 163341261 163342731 -36287419 - L1MA9 LINE L1 -4974 2193 822 258 352 21 7 chr5 163343161 163343303 -36286847 - L1ME LINE L1 -413 5757 5614 285 128 0 0 chr5 163343440 163343487 -36286663 + (CA)n Simple_repeat Simple_repeat 1 47 0 3002 66 8 0 chr5 163343545 163343938 -36286212 - L1P3 LINE L1 -4820 1641 1246 210 188 31 47 chr5 163344478 163344542 -36285608 + MIR SINE MIR 3 65 -197 323 257 26 53 chr5 163345000 163345113 -36285037 + L2 LINE L2 2191 2300 -1014 3805 206 27 9 chr5 163345273 163346010 -36284140 - MER21B LTR ERV1 -72 791 42 383 286 0 0 chr5 163346013 163346090 -36284060 - MER21B LTR ERV1 -775 88 12 727 205 8 0 chr5 163346099 163346226 -36283924 - FLAM_C SINE Alu -1 132 5 436 183 263 0 chr5 163346268 163346405 -36283745 + L2 LINE L2 2406 2578 -736 1335 217 101 53 chr5 163346405 163346819 -36283331 - MER57B LTR ERV1 0 434 1 2409 127 58 7 chr5 163346826 163347236 -36282914 + LTR23 LTR ERV1 1 431 -6 1192 204 58 14 chr5 163347236 163347511 -36282639 + L2 LINE L2 2572 2858 -456 1193 262 103 24 chr5 163347511 163347977 -36282173 + LTR33 LTR ERVL 1 503 -18 1225 264 60 25 chr5 163347978 163348413 -36281737 + L2 LINE L2 2859 3308 -5 2260 193 32 34 chr5 163348455 163348737 -36281413 - MLT1C LTR MaLR 0 467 185 2186 86 20 7 chr5 163348737 163349029 -36281121 - AluY SINE Alu -15 296 1 2260 193 32 34 chr5 163349029 163349212 -36280938 - MLT1C LTR MaLR -282 185 3 522 189 18 36 chr5 163349429 163349540 -36280610 - FLAM_A SINE Alu -2 140 32 356 279 62 12 chr5 163349544 163349705 -36280445 + Charlie8 DNA MER1_type 99 267 -2150 2728 178 60 117 chr5 163349747 163350518 -36279632 + LTR8A LTR ERV1 1 727 0 313 203 68 0 chr5 163350533 163350607 -36279543 + Charlie8 DNA MER1_type 2339 2417 0 1843 301 94 27 chr5 163350704 163351355 -36278795 + L2 LINE L2 1812 2592 -722 2116 178 49 68 chr5 163351355 163351828 -36278322 + MLT2C2 LTR ERVL 1 464 0 1843 301 94 27 chr5 163351828 163352223 -36277927 + L2 LINE L2 2592 2959 -355 407 243 157 7 chr5 163352987 163353127 -36277023 + MIR SINE MIR 91 251 -11 298 323 149 15 chr5 163353477 163353672 -36276478 - L3 LINE CR1 -1014 563 343 1952 102 28 0 chr5 163353711 163353995 -36276155 - L1MA6 LINE L1 0 6300 6009 300 214 270 0 chr5 163355290 163355379 -36274771 + MER81 DNA DNA 1 113 -1 499 249 134 35 chr5 163356027 163356228 -36273922 + MIR SINE MIR 28 248 -14 207 0 0 0 chr5 163356449 163356472 -36273678 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 572 306 30 15 chr5 163356771 163356970 -36273180 + MIR SINE MIR 58 259 -3 411 309 14 7 chr5 163358454 163358593 -36271557 + MIR3 SINE MIR 62 201 -7 1581 192 28 43 chr5 163359066 163359441 -36270709 + L1ME LINE L1 5188 5586 -580 471 232 110 7 chr5 163359510 163359665 -36270485 - MLT1K LTR MaLR -47 541 371 501 320 169 9 chr5 163359767 163359986 -36270164 - MLT1K LTR MaLR -238 350 97 228 211 141 42 chr5 163359994 163360065 -36270085 - MIR SINE MIR -172 90 13 840 105 0 0 chr5 163360131 163360236 -36269914 + U6 snRNA snRNA 3 107 0 1152 61 0 27 chr5 163360236 163360383 -36269767 + L1PA11 LINE L1 6028 6170 -4 333 198 63 164 chr5 163360414 163360652 -36269498 + L1MC4 LINE L1 7557 7770 -272 25 65 0 0 chr5 163360700 163360746 -36269404 + AT_rich Low_complexity Low_complexity 1 46 0 246 322 17 35 chr5 163361152 163361267 -36268883 - MER5A DNA MER1_type -6 183 71 2851 98 3 0 chr5 163361306 163361684 -36268466 + L1PA14 LINE L1 5783 6161 0 239 260 39 13 chr5 163361724 163361801 -36268349 - L1ME3A LINE L1 -17 6153 6075 * 1042 256 100 63 chr5 163361795 163361856 -36268294 - L1ME3A LINE L1 -314 5856 5799 744 181 0 15 chr5 163361856 163361989 -36268161 - FLAM_C SINE Alu 0 133 3 1042 256 100 63 chr5 163361989 163362724 -36267426 - L1ME3A LINE L1 -371 5799 5031 676 258 77 24 chr5 163362981 163363229 -36266921 - MER102a DNA MER1_type -30 300 40 343 269 201 0 chr5 163363298 163363447 -36266703 + MER5A DNA MER1_type 9 187 -2 319 239 128 43 chr5 163363460 163363577 -36266573 + MER5B DNA MER1_type 4 130 -48 2438 110 22 8 chr5 163363595 163363960 -36266190 - L1MA3 LINE L1 0 6305 5936 211 271 0 17 chr5 163363978 163364037 -36266113 + MER5B DNA MER1_type 120 177 -1 275 287 18 90 chr5 163364038 163364205 -36265945 - MIR3 SINE MIR -48 160 6 254 309 177 11 chr5 163364419 163364594 -36265556 + L3 LINE CR1 812 1015 -562 1722 197 0 7 chr5 163366038 163366338 -36263812 + AluJb SINE Alu 1 298 -14 233 322 0 0 chr5 163366395 163366454 -36263696 + L2 LINE L2 3214 3272 0 291 128 0 0 chr5 163367050 163367089 -36263061 - 5S rRNA rRNA -79 42 4 342 337 24 53 chr5 163367923 163367993 -36262157 - MIR SINE MIR -14 248 178 1631 153 6 57 chr5 163367993 163368307 -36261843 - AluJb SINE Alu -14 298 1 342 337 24 53 chr5 163368307 163368478 -36261672 - MIR SINE MIR -84 178 17 692 289 36 32 chr5 163368932 163369212 -36260938 + L2 LINE L2 3030 3310 -3 256 232 50 81 chr5 163369965 163370064 -36260086 + L2 LINE L2 3218 3313 0 208 203 348 0 chr5 163370173 163370242 -36259908 + MIR SINE MIR 75 167 -95 951 148 97 15 chr5 163370283 163370479 -36259671 - L1MB4 LINE L1 0 6180 5969 27 29 0 0 chr5 163370936 163370970 -36259180 + AT_rich Low_complexity Low_complexity 1 34 0 633 295 13 39 chr5 163371128 163371250 -36258900 + MIR SINE MIR 33 148 -114 616 216 64 23 chr5 163371250 163371421 -36258729 - MER104 DNA MER2_type 0 180 3 633 295 13 39 chr5 163371421 163371532 -36258618 + MIR SINE MIR 148 260 -2 2278 53 3 21 chr5 163371847 163372130 -36258020 + AluSc SINE Alu 1 278 -31 183 42 0 0 chr5 163372133 163372157 -36257993 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 874 298 80 19 chr5 163372188 163372702 -36257448 + L1ME4a LINE L1 5529 6073 -48 591 242 28 106 chr5 163372803 163373101 -36257049 - L1MC4a LINE L1 -332 5822 5666 185 333 18 0 chr5 163374179 163374236 -36255914 + MER5A DNA MER1_type 125 182 -7 434 301 74 31 chr5 163375295 163375458 -36254692 + MER5B DNA MER1_type 8 177 -1 21 0 0 0 chr5 163375860 163375881 -36254269 + AT_rich Low_complexity Low_complexity 1 21 0 227 236 222 14 chr5 163376668 163376740 -36253410 - MER5A DNA MER1_type -63 126 40 * 251 313 12 12 chr5 163376678 163376761 -36253389 + MER5A DNA MER1_type 101 183 -6 206 366 71 0 chr5 163377255 163377367 -36252783 + MIR SINE MIR 29 148 -60 253 262 33 0 chr5 163377499 163377560 -36252590 - Charlie8 DNA MER1_type -2354 63 1 291 160 20 0 chr5 163377625 163377675 -36252475 + L2 LINE L2 3222 3272 0 497 339 67 8 chr5 163377977 163378216 -36251934 + MIR SINE MIR 2 254 -8 217 324 138 7 chr5 163378380 163378525 -36251625 + MIR3 SINE MIR 22 185 -23 433 221 117 35 chr5 163378701 163378846 -36251304 - MIR SINE MIR -2 260 104 460 269 23 0 chr5 163380953 163381083 -36249067 - MER5B DNA MER1_type -40 138 6 682 231 6 19 chr5 163381602 163381762 -36248388 + MIR SINE MIR 73 230 -32 358 267 40 47 chr5 163382943 163383093 -36247057 - L1MEd LINE L1 -2902 3227 3079 1309 285 92 58 chr5 163383259 163384466 -36245684 - L1MEd LINE L1 -4862 1257 10 316 349 55 0 chr5 163384605 163384714 -36245436 + MIR SINE MIR 26 140 -68 380 256 141 0 chr5 163385080 163385201 -36244949 + MIR SINE MIR 61 198 -64 190 250 107 54 chr5 163386597 163386709 -36243441 - MIR3 SINE MIR -17 191 74 184 282 99 0 chr5 163388670 163388741 -36241409 + MIR SINE MIR 51 128 -80 207 233 117 0 chr5 163388850 163388910 -36241240 + MIR3 SINE MIR 119 185 -23 915 234 75 9 chr5 163391337 163391551 -36238599 + MIR SINE MIR 20 247 -15 237 269 15 0 chr5 163392445 163392512 -36237638 + CT-rich Low_complexity Low_complexity 3 70 0 307 235 191 44 chr5 163393090 163393226 -36236924 + MIR3 SINE MIR 5 160 -48 1864 112 4 8 chr5 163393951 163394209 -36235941 + AluSx SINE Alu 44 300 -12 31 0 0 0 chr5 163394370 163394401 -36235749 + AT_rich Low_complexity Low_complexity 1 31 0 4343 216 70 12 chr5 163394577 163395979 -36234171 - L1M4 LINE L1 -2740 3904 2425 2545 224 45 34 chr5 163395992 163396112 -36234038 - L1M4 LINE L1 -5871 671 554 270 0 0 0 chr5 163396112 163396142 -36234008 + (TG)n Simple_repeat Simple_repeat 2 31 0 2545 224 45 34 chr5 163396142 163396664 -36233486 - L1M4 LINE L1 -5988 554 22 267 214 119 48 chr5 163397357 163397483 -36232667 - L2 LINE L2 -218 3054 2920 2176 129 47 44 chr5 163397547 163397910 -36232240 + THE1B LTR MaLR 1 364 0 1118 242 28 0 chr5 163398197 163398412 -36231738 - MER58A DNA MER1_type -3 221 1 350 333 101 0 chr5 163399017 163399146 -36231004 - L2 LINE L2 -8 3264 3123 2668 40 0 0 chr5 163399304 163399607 -36230543 - AluY SINE Alu -3 308 6 22 0 0 0 chr5 163399672 163399694 -36230456 + AT_rich Low_complexity Low_complexity 1 22 0 535 259 114 40 chr5 163399949 163400177 -36229973 + MIR SINE MIR 16 260 -2 241 277 76 50 chr5 163400299 163400418 -36229732 + MIR SINE MIR 124 245 -17 440 337 16 22 chr5 163401924 163402108 -36228042 - MER5A DNA MER1_type 0 189 7 398 310 43 0 chr5 163402143 163402259 -36227891 + MIR3 SINE MIR 40 160 -48 207 371 22 11 chr5 163402259 163402348 -36227802 - MER5B DNA MER1_type 0 178 89 225 180 40 20 chr5 163402610 163402660 -36227490 - MER5B DNA MER1_type -126 52 2 2264 100 79 12 chr5 163402975 163403316 -36226834 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr5 163403375 163403396 -36226754 + AT_rich Low_complexity Low_complexity 1 21 0 659 256 45 5 chr5 163403406 163403605 -36226545 - MIR SINE MIR -10 252 46 403 291 0 37 chr5 163404318 163404452 -36225698 + MIR SINE MIR 4 132 -130 640 289 78 13 chr5 163404772 163405004 -36225146 - MIR SINE MIR -10 252 6 191 333 13 13 chr5 163405020 163405095 -36225055 - MIR3 SINE MIR -24 184 110 38 0 0 0 chr5 163406612 163406650 -36223500 + AT_rich Low_complexity Low_complexity 1 38 0 277 287 19 0 chr5 163406703 163406811 -36223339 - MER113 DNA MER1_type? -407 114 5 230 260 39 0 chr5 163406877 163406954 -36223196 - L2 LINE L2 -1 3312 3233 305 230 0 0 chr5 163406977 163407044 -36223106 - MIR SINE MIR -65 143 88 632 263 49 29 chr5 163407669 163407912 -36222238 + MIR SINE MIR 6 253 -9 377 286 99 21 chr5 163409135 163409327 -36220823 + L2 LINE L2 3107 3313 0 1604 178 24 3 chr5 163410175 163410462 -36219688 - AluJb SINE Alu -1 311 19 618 294 102 63 chr5 163410925 163411414 -36218736 - MLT1K LTR MaLR -10 578 71 255 31 0 0 chr5 163411442 163411474 -36218676 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 206 277 59 42 chr5 163411827 163411946 -36218204 - MIR3 SINE MIR -28 180 60 922 173 6 0 chr5 163412591 163412747 -36217403 - FRAM SINE Alu -8 168 12 1214 240 111 49 chr5 163412825 163413331 -36216819 - MLT1F1 LTR MaLR -36 557 1 609 229 53 0 chr5 163413381 163413551 -36216599 + MER5A DNA MER1_type 9 187 -2 383 333 7 14 chr5 163413576 163413723 -36216427 - MER5A DNA MER1_type -18 171 26 231 287 64 53 chr5 163414091 163414185 -36215965 - L3 LINE CR1 -11 1566 1472 326 299 145 43 chr5 163414263 163414567 -36215583 - L3 LINE CR1 -390 1187 853 204 179 0 0 chr5 163415258 163415297 -36214853 + (TG)n Simple_repeat Simple_repeat 2 40 0 322 282 0 29 chr5 163415413 163415516 -36214634 + MIR SINE MIR 42 141 -67 321 223 55 9 chr5 163415620 163415735 -36214415 - MIR SINE MIR -62 146 37 224 244 0 0 chr5 163415791 163415836 -36214314 + (TATG)n Simple_repeat Simple_repeat 2 46 0 768 264 58 30 chr5 163415857 163416220 -36213930 + MER113 DNA MER1_type? 78 450 -71 275 291 40 66 chr5 163416390 163416765 -36213385 - L2 LINE L2 -219 3053 2616 574 185 164 7 chr5 163416772 163416918 -36213232 - L1MD3 LINE L1 -176 7819 7651 305 232 85 12 chr5 163417044 163417126 -36213024 + MIR SINE MIR 32 119 -143 211 241 25 32 chr5 163417281 163417364 -36212786 + MIR SINE MIR 47 131 -77 256 299 169 43 chr5 163418224 163418431 -36211719 + MER112 DNA MER1_type 28 260 0 260 316 140 18 chr5 163418608 163418779 -36211371 - MIR SINE MIR -70 192 1 287 262 109 50 chr5 163418787 163419008 -36211142 + L3 LINE CR1 697 930 -647 1694 163 0 58 chr5 163420190 163420503 -36209647 - AluJb SINE Alu -17 295 1 541 282 20 45 chr5 163420575 163420777 -36209373 + L2 LINE L2 3117 3313 0 291 292 24 77 chr5 163421940 163422149 -36208001 - MIR SINE MIR -19 243 46 668 217 117 0 chr5 163422273 163422453 -36207697 + MIR SINE MIR 62 262 0 314 271 52 25 chr5 163423549 163423685 -36206465 + MIR SINE MIR 2 144 -64 198 0 0 0 chr5 163423721 163423743 -36206407 + (A)n Simple_repeat Simple_repeat 1 22 0 597 268 78 0 chr5 163424046 163424199 -36205951 + MIR SINE MIR 13 177 -85 239 284 83 9 chr5 163424272 163424381 -36205769 - MIR3 SINE MIR -11 197 81 602 297 11 0 chr5 163425376 163425558 -36204592 + MIR SINE MIR 78 261 -1 713 339 8 8 chr5 163425591 163425842 -36204308 - MIR SINE MIR -4 258 8 192 125 0 0 chr5 163426366 163426398 -36203752 + (CA)n Simple_repeat Simple_repeat 2 33 0 559 316 24 5 chr5 163426932 163427144 -36203006 + MIR SINE MIR 47 262 0 1006 238 79 83 chr5 163427519 163428037 -36202113 - MLT1F LTR MaLR -21 521 6 2555 212 58 7 chr5 163428660 163429259 -36200891 + L1ME1 LINE L1 5531 6160 -6 291 316 0 0 chr5 163429993 163430069 -36200081 - MER117 DNA MER1_type -92 105 30 29 60 0 0 chr5 163430088 163430138 -36200012 + AT_rich Low_complexity Low_complexity 1 50 0 1546 177 33 0 chr5 163430139 163430439 -36199711 + L1M3c LINE L1 1312 1621 -4520 370 191 232 54 chr5 163430479 163430647 -36199503 - MLT1K LTR MaLR -42 546 349 295 305 25 54 chr5 163431372 163431575 -36198575 - MIR3 SINE MIR -10 198 2 1204 284 68 20 chr5 163431743 163432303 -36197847 - L1MC4a LINE L1 -1799 6009 5423 303 289 170 0 chr5 163432445 163432604 -36197546 - L2 LINE L2 -7 3306 3121 315 0 0 0 chr5 163433812 163433847 -36196303 + (CAA)n Simple_repeat Simple_repeat 2 36 0 341 218 45 45 chr5 163434059 163434192 -36195958 + L2 LINE L2 3139 3271 -1 249 239 0 28 chr5 163434220 163434291 -36195859 - L2 LINE L2 -7 3306 3238 441 138 0 0 chr5 163434575 163434655 -36195495 + (GA)n Simple_repeat Simple_repeat 1 80 0 855 209 62 0 chr5 163434822 163434999 -36195151 + MER58A DNA MER1_type 37 224 0 374 325 25 12 chr5 163435311 163435471 -36194679 + L2 LINE L2 2894 3055 -217 853 272 142 19 chr5 163435617 163436143 -36194007 - L2 LINE L2 0 3313 2722 306 217 0 0 chr5 163436352 163436421 -36193729 + MER5A DNA MER1_type 41 109 -80 312 280 182 8 chr5 163436589 163436721 -36193429 - MER5A DNA MER1_type -9 180 26 425 266 89 18 chr5 163436846 163437015 -36193135 + MIR SINE MIR 79 259 -3 506 232 13 33 chr5 163437782 163437933 -36192217 - L2 LINE L2 -1 3312 3165 7710 29 0 0 chr5 163438099 163439038 -36191112 - L1PA4 LINE L1 -3 6152 5213 526 263 117 0 chr5 163439522 163439701 -36190449 + MIR SINE MIR 19 218 -44 577 278 117 63 chr5 163440109 163440588 -36189562 - L2 LINE L2 0 3313 2809 183 225 0 25 chr5 163496601 163496641 -36133509 + L3 LINE CR1 1520 1558 -19 2510 78 0 0 chr5 163496744 163497053 -36133097 - AluSq SINE Alu -3 310 2 692 289 108 48 chr5 163498099 163498414 -36131736 + L3 LINE CR1 1214 1547 -30 188 217 203 0 chr5 163498527 163498596 -36131554 + MIR3 SINE MIR 87 169 -39 241 250 48 67 chr5 163499411 163499515 -36130635 - L2 LINE L2 0 3272 3171 244 239 42 0 chr5 163499614 163499685 -36130465 - MER5A DNA MER1_type -88 101 28 275 329 40 20 chr5 163501213 163501362 -36128788 - MIR SINE MIR -13 249 98 814 258 70 13 chr5 163503124 163503572 -36126578 - LTR33 LTR ERVL 0 521 10 382 271 126 33 chr5 163504130 163504344 -36125806 + L2 LINE L2 3079 3312 -1 2318 95 0 20 chr5 163504662 163504968 -36125182 + AluSx SINE Alu 1 300 -12 304 274 71 103 chr5 163505142 163505290 -36124860 - MIR SINE MIR -1 261 123 1162 211 128 60 chr5 163505290 163505558 -36124592 - MLT1C LTR MaLR -1 466 155 2411 89 0 10 chr5 163505558 163505871 -36124279 - AluY SINE Alu -1 310 1 1162 211 128 60 chr5 163505871 163506038 -36124112 - MLT1C LTR MaLR -312 155 1 304 274 71 103 chr5 163506038 163506141 -36124009 - MIR SINE MIR -139 123 18 214 286 245 0 chr5 163506624 163506722 -36123428 + MIR SINE MIR 138 259 -3 294 246 172 30 chr5 163507734 163507868 -36122282 + MIR SINE MIR 2 154 -108 321 299 167 7 chr5 163508684 163508828 -36121322 + MIR SINE MIR 90 256 -6 551 348 71 30 chr5 163509935 163510274 -36119876 + L2 LINE L2 2920 3272 0 332 235 135 88 chr5 163510564 163510734 -36119416 - MER5B DNA MER1_type 0 178 1 302 255 168 7 chr5 163511584 163511733 -36118417 - MIR SINE MIR 0 262 90 364 232 116 11 chr5 163511755 163511850 -36118300 + L2 LINE L2 3205 3309 -4 234 298 71 89 chr5 163512045 163512213 -36117937 - L2 LINE L2 -31 3241 3077 609 215 5 75 chr5 163512216 163512402 -36117748 - MLT1K LTR MaLR -2 586 414 561 83 0 0 chr5 163512411 163512495 -36117655 + (TC)n Simple_repeat Simple_repeat 1 84 0 928 241 173 19 chr5 163512495 163512864 -36117286 - MLT1K LTR MaLR -158 430 5 431 270 230 10 chr5 163513387 163513587 -36116563 + MIR SINE MIR 13 256 -6 295 212 12 59 chr5 163514208 163514293 -36115857 - MIR SINE MIR -12 250 170 * 567 262 52 15 chr5 163514286 163514435 -36115715 + MIR SINE MIR 22 174 -62 338 89 0 18 chr5 163515203 163515259 -36114891 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 291 328 69 35 chr5 163515566 163515682 -36114468 + MIR3 SINE MIR 41 160 -48 297 326 0 0 chr5 163515710 163515799 -36114351 + MER117 DNA MER1_type 30 118 -79 218 262 66 0 chr5 163515806 163515867 -36114283 - L2 LINE L2 -260 3053 2989 248 224 0 17 chr5 163515953 163516011 -36114139 - MER117 DNA MER1_type -110 87 31 640 256 56 37 chr5 163516049 163516264 -36113886 - L2 LINE L2 -426 2888 2670 263 301 133 76 chr5 163516540 163516903 -36113247 - L2 LINE L2 -660 2654 2313 1627 194 43 17 chr5 163516903 163517202 -36112948 + AluJb SINE Alu 1 307 -5 263 301 133 76 chr5 163517202 163517642 -36112508 - L2 LINE L2 -1001 2313 1805 631 230 34 34 chr5 163517887 163518070 -36112080 - MIR3 SINE MIR -21 187 13 189 270 99 72 chr5 163518085 163518196 -36111954 + MIR SINE MIR 7 120 -142 817 275 61 26 chr5 163518306 163518713 -36111437 - MLT1K LTR MaLR -123 465 3 193 209 0 47 chr5 163518713 163518756 -36111394 + L2 LINE L2 3217 3257 -15 1028 244 105 6 chr5 163520284 163520608 -36109542 + MER113 DNA MER1_type? 166 521 0 261 145 65 32 chr5 163520625 163520687 -36109463 + MIR3 SINE MIR 118 181 -27 223 236 55 0 chr5 163521816 163521871 -36108279 - L2 LINE L2 0 3272 3215 350 235 214 8 chr5 163522928 163523057 -36107093 + MER5A DNA MER1_type 21 189 0 319 282 77 50 chr5 163523170 163523351 -36106799 + MER5A DNA MER1_type 2 187 -2 429 200 61 35 chr5 163524393 163524508 -36105642 - MIR3 SINE MIR -78 130 13 379 284 112 8 chr5 163524723 163524857 -36105293 + MIR3 SINE MIR 49 196 -12 375 247 183 0 chr5 163525265 163525358 -36104792 - L2 LINE L2 -1 3271 3162 273 304 116 27 chr5 163525599 163525823 -36104327 - L2 LINE L2 -459 2855 2612 1730 168 17 20 chr5 163525998 163526290 -36103860 + AluJo SINE Alu 2 292 -20 636 303 25 21 chr5 163526703 163526941 -36103209 - MLT1K LTR MaLR 0 588 350 3692 167 22 0 chr5 163526948 163527590 -36102560 + L1MB5 LINE L1 5519 6174 0 281 295 140 16 chr5 163527606 163527799 -36102351 - MLT1K LTR MaLR -367 221 5 207 283 22 0 chr5 163528187 163528233 -36101917 - MIR SINE MIR -98 110 64 269 264 0 112 chr5 163528498 163528526 -36101624 + L3 LINE CR1 1358 1388 -189 2448 86 3 0 chr5 163528526 163528830 -36101320 + AluY SINE Alu 1 305 -6 269 264 0 112 chr5 163528830 163528926 -36101224 + L3 LINE CR1 1388 1468 -109 360 0 0 0 chr5 163528976 163529016 -36101134 + (CA)n Simple_repeat Simple_repeat 2 41 0 520 239 182 19 chr5 163529097 163529306 -36100844 - MIR SINE MIR 0 262 20 672 260 65 15 chr5 163529369 163529569 -36100581 - MIR SINE MIR -1 261 52 238 279 16 0 chr5 163529678 163529739 -36100411 - L2 LINE L2 -3 3269 3208 665 308 49 4 chr5 163530821 163531068 -36099082 - MIR SINE MIR -3 259 2 215 314 8 74 chr5 163531112 163531233 -36098917 - L2 LINE L2 -182 3131 3019 212 292 97 0 chr5 163531256 163531328 -36098822 - L2 LINE L2 0 3313 3235 224 246 77 15 chr5 163533036 163533101 -36097049 - MIR SINE MIR -98 110 42 650 317 24 48 chr5 163533420 163533669 -36096481 + MIR SINE MIR 20 262 0 192 309 171 7 chr5 163533672 163533824 -36096326 - L2 LINE L2 -188 3084 2908 2360 108 40 8 chr5 163533951 163534304 -36095846 - THE1B LTR MaLR 0 364 1 462 255 40 20 chr5 163534915 163535064 -36095086 + MER5B DNA MER1_type 24 175 -3 192 36 0 0 chr5 163535162 163535190 -36094960 - L2 LINE L2 0 3313 3286 * 363 334 27 15 chr5 163535184 163535321 -36094829 - MIR SINE MIR -62 146 15 1013 273 21 92 chr5 163535424 163535900 -36094250 - L2 LINE L2 -42 3271 2830 805 187 39 7 chr5 163536301 163536456 -36093694 - MER20 DNA MER1_type -59 160 1 229 317 99 30 chr5 163536458 163536559 -36093591 + L3 LINE CR1 1446 1553 -24 312 263 89 67 chr5 163536576 163536755 -36093395 - MIR3 SINE MIR -18 190 8 367 298 10 0 chr5 163537098 163537202 -36092948 + MIR SINE MIR 39 143 -119 570 252 0 0 chr5 163537269 163537384 -36092766 - L2 LINE L2 -2 3311 3197 463 252 44 7 chr5 163537826 163537961 -36092189 + MIR3 SINE MIR 7 146 -62 635 326 27 84 chr5 163537976 163538414 -36091736 - L2 LINE L2 -1 3271 2859 255 79 0 0 chr5 163539243 163539281 -36090869 + (TAA)n Simple_repeat Simple_repeat 2 39 0 189 94 0 0 chr5 163539293 163539325 -36090825 + (TTA)n Simple_repeat Simple_repeat 2 33 0 573 282 13 6 chr5 163539337 163539493 -36090657 - MIR SINE MIR -18 244 88 241 224 0 17 chr5 163539644 163539702 -36090448 + Charlie4 DNA MER1_type 1898 1954 -7 216 0 0 0 chr5 163539813 163539837 -36090313 + (T)n Simple_repeat Simple_repeat 1 24 0 382 250 158 66 chr5 163540599 163540827 -36089323 - MLT1K LTR MaLR -2 586 338 408 256 24 40 chr5 163540962 163541087 -36089063 + MIR SINE MIR 106 228 -34 223 227 0 0 chr5 163541363 163541407 -36088743 + MIR SINE MIR 218 261 -1 933 257 14 0 chr5 163541858 163542068 -36088082 - MIR SINE MIR 0 262 50 2238 160 12 7 chr5 163542290 163542696 -36087454 - L1MB5 LINE L1 0 6174 5767 346 278 31 41 chr5 163542708 163542720 -36087430 + L1MC4 LINE L1 6608 6619 -1423 2383 114 31 6 chr5 163542720 163543079 -36087071 - L1PB1 LINE L1 -2 6149 5782 346 278 31 41 chr5 163543079 163543163 -36086987 + L1MC4 LINE L1 6619 6703 -1339 397 86 0 0 chr5 163543168 163543226 -36086924 - L1PB1 LINE L1 -360 5791 5734 2182 105 7 3 chr5 163543356 163543650 -36086500 + AluSc SINE Alu 1 295 -14 2468 92 3 0 chr5 163543940 163544244 -36085906 + AluSp SINE Alu 1 305 -8 375 267 55 55 chr5 163544691 163544856 -36085294 + MER5A DNA MER1_type 16 180 -9 268 287 198 0 chr5 163545004 163545105 -36085045 - L2 LINE L2 0 3313 3193 372 310 215 28 chr5 163545163 163545489 -36084661 - L3 LINE CR1 0 1577 1191 264 230 35 58 chr5 163545593 163545680 -36084470 - L2 LINE L2 -6 3307 3223 193 267 33 33 chr5 163546027 163546087 -36084063 - MIR3 SINE MIR -17 191 132 397 309 161 12 chr5 163546508 163546670 -36083480 - MIR3 SINE MIR -4 204 19 299 111 0 0 chr5 163547250 163547295 -36082855 - L2 LINE L2 0 3313 3269 234 367 50 22 chr5 163547321 163547460 -36082690 - L2 LINE L2 -5 3308 3166 190 338 38 0 chr5 163548001 163548081 -36082069 + MIR SINE MIR 147 229 -33 185 377 65 35 chr5 163548242 163548441 -36081709 - MIR SINE MIR -50 212 8 1285 187 130 55 chr5 163548882 163549176 -36080974 + MER113 DNA MER1_type? 6 351 -170 2147 145 0 0 chr5 163549176 163549480 -36080670 + AluSx SINE Alu 1 304 -8 1285 187 130 55 chr5 163549480 163549661 -36080489 + MER113 DNA MER1_type? 351 517 -4 254 333 0 23 chr5 163549687 163549774 -36080376 - MIR3 SINE MIR -9 199 115 450 328 0 0 chr5 163550542 163550661 -36079489 - L2 LINE L2 -5 3267 3149 402 328 94 6 chr5 163550933 163551104 -36079046 + L3 LINE CR1 1365 1550 -27 477 318 57 66 chr5 163551113 163551446 -36078704 - L2 LINE L2 0 3272 2943 304 288 0 0 chr5 163551723 163551796 -36078354 + L3 LINE CR1 900 972 -605 299 285 181 42 chr5 163552173 163552366 -36077784 + L3 LINE CR1 1167 1386 -191 666 259 17 23 chr5 163552471 163552645 -36077505 + MIR SINE MIR 90 262 0 384 343 83 0 chr5 163552777 163552946 -36077204 + MIR SINE MIR 72 254 -8 224 276 17 0 chr5 163552950 163553008 -36077142 + MIR3 SINE MIR 149 207 -1 489 223 139 12 chr5 163553418 163553584 -36076566 + Charlie8 DNA MER1_type 76 262 -2155 334 278 61 9 chr5 163553997 163554112 -36076038 + MIR SINE MIR 16 136 -72 826 268 67 13 chr5 163554211 163554510 -36075640 + MER102b DNA MER1_type 2 316 -25 227 317 29 41 chr5 163554603 163554789 -36075361 + MIR SINE MIR 14 200 -8 281 368 24 0 chr5 163556316 163556441 -36073709 + MIR SINE MIR 10 137 -125 632 274 41 63 chr5 163556443 163556713 -36073437 - L2 LINE L2 -41 3272 3009 1763 110 0 0 chr5 163556718 163556946 -36073204 + AluSg SINE Alu 1 228 -82 379 293 32 8 chr5 163557259 163557382 -36072768 - MIR SINE MIR -59 203 78 352 271 108 35 chr5 163557960 163558218 -36071932 + L1MC4 LINE L1 7764 8040 -2 1909 151 20 3 chr5 163558388 163558680 -36071470 + AluSx SINE Alu 1 297 -15 356 224 19 0 chr5 163558863 163558970 -36071180 - L1MC4 LINE L1 -1 8041 7933 233 325 25 0 chr5 163559479 163559559 -36070591 - L2 LINE L2 0 3313 3232 236 250 26 66 chr5 163562450 163562526 -36067624 + MIR3 SINE MIR 107 179 -29 333 0 0 0 chr5 163562592 163562629 -36067521 + (TAA)n Simple_repeat Simple_repeat 2 38 0 376 322 139 10 chr5 163562637 163562845 -36067305 - MIR SINE MIR -15 247 13 944 297 94 8 chr5 163562847 163563228 -36066922 - MLT1L LTR MaLR -2 613 200 230 330 147 0 chr5 163563394 163563503 -36066647 - MER103 DNA DNA -32 134 10 321 231 0 13 chr5 163563532 163563610 -36066540 + HsTC2 DNA Tc2 1 77 -1821 190 307 78 46 chr5 163563745 163563898 -36066252 - L2 LINE L2 -58 3255 3098 387 288 50 25 chr5 163563960 163564120 -36066030 - L2 LINE L2 -345 2968 2805 541 242 183 0 chr5 163564230 163564383 -36065767 + MER5A DNA MER1_type 9 189 0 282 274 29 0 chr5 163565226 163565328 -36064822 + MER113 DNA MER1_type? 1 105 -416 1892 160 3 32 chr5 163565420 163565733 -36064417 - AluJo SINE Alu -4 308 5 180 351 26 0 chr5 163566196 163566273 -36063877 + MIR SINE MIR 1 79 -183 1142 203 0 58 chr5 163566273 163566564 -36063586 + MLT1B LTR MaLR 9 282 -108 624 264 64 32 chr5 163566759 163567073 -36063077 + MLT1K LTR MaLR 264 587 -1 592 243 188 5 chr5 163567718 163567936 -36062214 - MIR SINE MIR -1 261 4 396 288 86 52 chr5 163567968 163568201 -36061949 - MIR SINE MIR -12 250 10 344 342 0 9 chr5 163568254 163568368 -36061782 + MIR3 SINE MIR 60 172 -36 476 274 132 38 chr5 163568646 163568912 -36061238 + MER102b DNA MER1_type 38 328 -13 429 294 49 55 chr5 163569592 163569755 -36060395 - L2 LINE L2 -4 3309 3148 216 395 102 0 chr5 163569897 163570054 -36060096 - L2 LINE L2 -521 2793 2621 209 340 187 10 chr5 163570455 163570840 -36059310 + L2 LINE L2 2857 3309 -4 775 124 0 0 chr5 163571261 163571366 -36058784 + AluJb SINE Alu 14 118 -194 33 25 0 0 chr5 163571368 163571408 -36058742 + AT_rich Low_complexity Low_complexity 1 40 0 1150 45 8 0 chr5 163571536 163571668 -36058482 + AluY SINE Alu 1 133 -178 35 24 0 0 chr5 163571668 163571710 -36058440 + AT_rich Low_complexity Low_complexity 1 42 0 205 237 40 40 chr5 163571901 163571977 -36058173 - MIR SINE MIR -62 200 125 522 125 0 0 chr5 163572017 163572097 -36058053 + MADE1 DNA Mariner 1 80 0 1891 103 16 44 chr5 163572250 163572569 -36057581 + AluSx SINE Alu 1 310 -2 33 25 0 0 chr5 163573736 163573776 -36056374 + GC_rich Low_complexity Low_complexity 1 40 0 240 333 0 36 chr5 163574303 163574387 -36055763 - MIR SINE MIR -75 187 107 280 204 19 0 chr5 163574660 163574714 -36055436 - MIR SINE MIR -100 162 108 1127 209 42 0 chr5 163575558 163575773 -36054377 + MER58A DNA MER1_type 1 224 0 278 148 0 0 chr5 163575789 163575843 -36054307 + MER117 DNA MER1_type 44 97 -100 237 274 68 14 chr5 163576121 163576194 -36053956 - MIR3 SINE MIR -46 162 86 321 298 225 11 chr5 163577320 163577498 -36052652 + MIR SINE MIR 3 218 -44 400 319 30 12 chr5 163578375 163578541 -36051609 - MIR SINE MIR 0 262 94 221 343 154 6 chr5 163578624 163578799 -36051351 - L3 LINE CR1 -76 1501 1301 338 347 218 13 chr5 163578957 163579182 -36050968 - L2 LINE L2 -28 3244 2974 784 211 74 16 chr5 163579189 163579379 -36050771 - MIR SINE MIR -1 261 61 623 251 12 35 chr5 163579771 163579942 -36050208 - MIR SINE MIR -75 187 21 447 226 66 0 chr5 163580000 163580106 -36050044 + MIR SINE MIR 84 196 -66 361 213 67 33 chr5 163580131 163580281 -36049869 + L1ME3A LINE L1 5783 5937 -233 22 0 0 0 chr5 163580282 163580304 -36049846 + AT_rich Low_complexity Low_complexity 1 22 0 198 255 75 64 chr5 163580372 163580466 -36049684 - L2 LINE L2 -459 2855 2761 1675 116 74 74 chr5 163580604 163580915 -36049235 - AluSx SINE Alu -1 311 1 236 254 113 0 chr5 163580930 163581001 -36049149 + MIR SINE MIR 184 262 0 780 294 57 9 chr5 163581271 163581499 -36048651 + MIR SINE MIR 14 252 -10 335 274 101 18 chr5 163582093 163582261 -36047889 - MIR SINE MIR -70 192 11 246 227 84 92 chr5 163582926 163582985 -36047165 + MIR SINE MIR 118 176 -86 2207 87 14 0 chr5 163582985 163583272 -36046878 + AluY SINE Alu 1 291 -20 246 227 84 92 chr5 163583272 163583331 -36046819 + MIR SINE MIR 176 235 -27 507 290 110 10 chr5 163583351 163583551 -36046599 - MIR SINE MIR -4 258 39 290 302 111 53 chr5 163583938 163584279 -36045871 - L2 LINE L2 -80 3233 2873 2368 87 3 0 chr5 163584290 163584588 -36045562 + AluSc SINE Alu 11 309 0 664 286 44 15 chr5 163586211 163586414 -36043736 - MIR SINE MIR -48 214 6 300 306 10 10 chr5 163586472 163586570 -36043580 + MIR3 SINE MIR 67 164 -44 184 282 0 0 chr5 163586580 163586619 -36043531 - L2 LINE L2 -4 3309 3271 482 369 66 4 chr5 163586762 163587003 -36043147 - MIR SINE MIR -4 258 3 385 356 12 12 chr5 163587165 163587325 -36042825 + MER5A DNA MER1_type 2 161 -28 373 290 107 38 chr5 163587913 163588044 -36042106 + MIR3 SINE MIR 24 163 -45 313 277 0 14 chr5 163588551 163588699 -36041451 + GA-rich Low_complexity Low_complexity 3 148 0 694 244 45 15 chr5 163588799 163589000 -36041150 + Charlie1 DNA MER1_type 31 237 -2524 645 140 7 56 chr5 163588985 163589077 -36041073 + Charlie1 DNA MER1_type 2620 2704 -57 * 1823 169 7 7 chr5 163589077 163589367 -36040783 - AluJb SINE Alu -22 290 1 645 140 7 56 chr5 163589367 163589417 -36040733 + Charlie1 DNA MER1_type 2704 2755 -6 206 162 27 0 chr5 163589703 163589740 -36040410 + L2 LINE L2 3227 3264 -8 2549 86 46 38 chr5 163589763 163590135 -36040015 - THE1C LTR MaLR 0 375 1 833 236 114 9 chr5 163590922 163591142 -36039008 - MIR SINE MIR 0 262 20 572 265 25 66 chr5 163591225 163591413 -36038737 + MIR SINE MIR 14 193 -69 427 283 164 9 chr5 163591413 163591639 -36038511 + MIR SINE MIR 2 262 0 598 221 175 0 chr5 163591817 163591971 -36038179 + MER5A DNA MER1_type 9 189 0 205 118 39 0 chr5 163592928 163592979 -36037171 + (CA)n Simple_repeat Simple_repeat 1 53 0 272 345 88 46 chr5 163593929 163594123 -36036027 - MIR SINE MIR -59 203 2 194 0 0 37 chr5 163594464 163594491 -36035659 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 427 261 92 8 chr5 163594621 163594751 -36035399 + MIR3 SINE MIR 20 160 -48 604 248 71 12 chr5 163594856 163595044 -36035106 - MIR SINE MIR -33 229 32 267 330 155 0 chr5 163595763 163595866 -36034284 + MIR3 SINE MIR 43 161 -47 226 180 20 0 chr5 163596217 163596267 -36033883 + (TA)n Simple_repeat Simple_repeat 2 52 0 2325 153 30 28 chr5 163596885 163597344 -36032806 - L1MB5 LINE L1 0 6174 5715 253 282 256 13 chr5 163598028 163598184 -36031966 + MIR SINE MIR 47 240 -22 * 535 285 140 18 chr5 163598147 163598368 -36031782 - MIR SINE MIR 0 262 15 447 256 26 8 chr5 163598518 163598635 -36031515 + MER5A DNA MER1_type 64 182 -7 409 34 34 0 chr5 163598906 163598965 -36031185 + (CA)n Simple_repeat Simple_repeat 2 62 0 441 291 53 13 chr5 163599596 163599747 -36030403 + MIR3 SINE MIR 13 169 -39 541 264 86 23 chr5 163599787 163599961 -36030189 - MIR SINE MIR -1 261 77 2280 110 0 0 chr5 163599998 163600290 -36029860 + AluSx SINE Alu 1 292 -20 393 22 0 0 chr5 163600845 163600891 -36029259 + (TC)n Simple_repeat Simple_repeat 2 47 0 2084 121 28 3 chr5 163600907 163601197 -36028953 + AluSx SINE Alu 1 297 -15 322 249 77 77 chr5 163601269 163601450 -36028700 - L1ME4a LINE L1 0 6121 5941 1559 233 55 55 chr5 163601713 163601846 -36028304 - L1M4 LINE L1 -1961 4185 4053 1734 166 0 53 chr5 163601846 163602148 -36028002 + AluJo SINE Alu 1 286 -26 1559 233 55 55 chr5 163602148 163602580 -36027570 - L1M4 LINE L1 -2092 4054 3620 183 246 66 0 chr5 163602794 163602855 -36027295 - L3 LINE CR1 -337 1240 1176 434 275 50 90 chr5 163603386 163603608 -36026542 - L3 LINE CR1 -72 1505 1293 * 754 252 56 43 chr5 163603606 163603840 -36026310 - MIR SINE MIR 0 262 26 428 242 27 74 chr5 163603843 163603992 -36026158 + MIR SINE MIR 2 143 -119 225 296 247 0 chr5 163604414 163604576 -36025574 + MIR SINE MIR 7 208 -54 384 260 24 41 chr5 163604797 163604920 -36025230 - MIR SINE MIR -79 183 63 292 203 87 14 chr5 163605345 163605414 -36024736 + L2 LINE L2 3199 3272 0 1825 159 0 24 chr5 163605556 163605852 -36024298 + AluJb SINE Alu 24 312 0 2411 93 3 0 chr5 163605878 163606180 -36023970 + AluSp SINE Alu 1 303 -10 184 330 71 54 chr5 163606244 163606356 -36023794 - L2 LINE L2 -36 3236 3123 766 247 134 8 chr5 163606381 163606605 -36023545 - MIR SINE MIR -8 254 10 541 294 124 57 chr5 163606643 163606997 -36023153 - L2 LINE L2 -42 3230 2853 230 337 153 0 chr5 163608003 163608101 -36022049 - MIR SINE MIR -82 180 68 258 416 47 12 chr5 163608338 163608593 -36021557 + L2 LINE L2 2522 2785 -529 246 412 50 0 chr5 163608625 163608744 -36021406 + L2 LINE L2 3136 3260 -12 205 178 0 22 chr5 163609579 163609624 -36020526 + MIR SINE MIR 85 128 -80 1934 134 0 0 chr5 163609916 163610208 -36019942 + AluJb SINE Alu 1 292 -20 675 193 10 79 chr5 163611124 163611326 -36018824 - MER53 DNA DNA -1 188 1 292 268 236 13 chr5 163611370 163611527 -36018623 - L3 LINE CR1 -33 1544 1353 384 319 0 34 chr5 163611528 163611647 -36018503 + L2 LINE L2 3199 3313 0 281 314 12 0 chr5 163611675 163611761 -36018389 - L3 LINE CR1 -228 1349 1263 259 320 133 28 chr5 163611769 163611950 -36018200 - MIR3 SINE MIR -6 202 3 23 33 0 0 chr5 163612259 163612289 -36017861 + AT_rich Low_complexity Low_complexity 1 30 0 427 191 21 11 chr5 163612372 163612466 -36017684 - L2 LINE L2 -244 3069 2975 449 362 33 0 chr5 163613069 163613279 -36016871 + MIR SINE MIR 14 230 -32 195 284 84 11 chr5 163614378 163614473 -36015677 + MIR SINE MIR 113 214 -48 1882 148 20 7 chr5 163614480 163614784 -36015366 + AluSx SINE Alu 3 310 -2 1431 161 37 4 chr5 163614790 163615033 -36015117 + AluJb SINE Alu 1 251 -61 324 256 60 34 chr5 163616206 163616323 -36013827 - Charlie8 DNA MER1_type -2246 171 52 423 244 8 63 chr5 163616812 163616939 -36013211 + MIR SINE MIR 33 152 -56 1748 172 120 3 chr5 163617331 163617657 -36012493 - MLT1A1 LTR MaLR 0 365 2 2637 194 27 27 chr5 163617679 163618200 -36011950 - MLT1F LTR MaLR 0 542 22 3510 189 45 2 chr5 163618220 163618818 -36011332 + L1M4b LINE L1 19 642 -6217 1150 212 118 50 chr5 163618818 163619158 -36010992 - MLT1A1 LTR MaLR -2 363 1 4444 146 73 60 chr5 163619158 163619417 -36010733 + L1M4b LINE L1 638 892 -5967 2086 126 0 0 chr5 163619417 163619727 -36010423 + AluSx SINE Alu 1 310 -2 4444 146 73 60 chr5 163619727 163620404 -36009746 + L1M4b LINE L1 892 1586 -5273 464 146 4 0 chr5 163620460 163620543 -36009607 - MLT1A1 LTR MaLR -5 423 278 300 164 43 60 chr5 163620570 163620686 -36009464 + (CTATA)n Simple_repeat Simple_repeat 2 115 0 1911 224 25 20 chr5 163620735 163621289 -36008861 + L1M4b LINE L1 1584 2140 -4819 502 261 90 64 chr5 163621550 163621687 -36008463 + MIR SINE MIR 23 170 -92 2226 86 0 16 chr5 163621687 163621991 -36008159 + AluSx SINE Alu 1 299 -13 502 261 90 64 chr5 163621991 163622087 -36008063 + MIR SINE MIR 170 262 0 593 203 10 106 chr5 163622321 163622528 -36007622 - MIR SINE MIR 0 262 76 194 200 27 164 chr5 163622680 163622790 -36007360 - MIR SINE MIR -82 180 86 256 102 41 0 chr5 163623103 163623152 -36006998 + CT-rich Low_complexity Low_complexity 2 52 0 393 214 117 0 chr5 163623763 163623866 -36006284 + L3 LINE CR1 1282 1396 -181 680 239 19 56 chr5 163623889 163624102 -36006048 + L2 LINE L2 3101 3305 -8 23 0 0 0 chr5 163624108 163624131 -36006019 + AT_rich Low_complexity Low_complexity 1 23 0 762 174 0 51 chr5 163624315 163624453 -36005697 + FLAM_C SINE Alu 1 131 -2 37 23 0 0 chr5 163624453 163624497 -36005653 + AT_rich Low_complexity Low_complexity 1 44 0 2427 67 0 0 chr5 163624499 163624798 -36005352 + AluY SINE Alu 1 299 -12 641 278 149 11 chr5 163624857 163625273 -36004877 - MLT1K LTR MaLR -19 569 86 2113 107 3 0 chr5 163625275 163625566 -36004584 + AluSx SINE Alu 1 292 -20 308 290 76 9 chr5 163626100 163626254 -36003896 - MIR SINE MIR -69 139 17 691 281 72 9 chr5 163626322 163626543 -36003607 - MIR SINE MIR 0 262 28 287 109 0 4 chr5 163626546 163626598 -36003552 + AluJb SINE Alu 89 129 -173 297 236 42 0 chr5 163626632 163626704 -36003446 - MIR SINE MIR -33 229 155 446 209 12 12 chr5 163626757 163626843 -36003307 - MER20 DNA MER1_type 0 219 134 675 161 46 23 chr5 163626875 163627005 -36003145 - MER20 DNA MER1_type -76 143 11 342 282 53 82 chr5 163627031 163627237 -36002913 + L2 LINE L2 3114 3313 0 245 252 4 0 chr5 163627236 163627293 -36002857 - MIR SINE MIR -69 139 94 * 258 286 88 0 chr5 163627425 163627516 -36002634 - MIR3 SINE MIR -54 154 56 739 241 108 29 chr5 163627757 163627790 -36002360 + MIR SINE MIR 3 32 -230 1462 151 119 11 chr5 163627790 163628068 -36002082 + AluSg1 SINE Alu 1 308 -1 739 241 108 29 chr5 163628068 163628275 -36001875 + MIR SINE MIR 32 262 0 1944 139 13 0 chr5 163628366 163628668 -36001482 + AluSx SINE Alu 1 306 -6 296 358 16 8 chr5 163629146 163629269 -36000881 - MIR SINE MIR -65 143 20 1227 246 43 9 chr5 163629278 163629603 -36000547 - MER46C DNA MER2_type -2 336 1 2841 122 7 25 chr5 163629603 163630037 -36000113 - MSTC LTR MaLR 0 428 1 36 40 0 0 chr5 163630223 163630273 -35999877 + AT_rich Low_complexity Low_complexity 1 50 0 1497 159 25 21 chr5 163630277 163630560 -35999590 + L1MA9 LINE L1 5960 6243 -69 382 308 38 23 chr5 163630642 163630775 -35999375 - MIR SINE MIR -10 252 118 506 282 164 28 chr5 163630786 163630916 -35999234 - L2 LINE L2 -66 3247 3136 219 69 0 0 chr5 163630916 163630945 -35999205 + (TA)n Simple_repeat Simple_repeat 2 30 0 506 282 164 28 chr5 163630945 163631204 -35998946 - L2 LINE L2 -177 3136 2805 1831 122 3 27 chr5 163631339 163631635 -35998515 + AluJb SINE Alu 1 289 -23 1089 260 84 57 chr5 163631726 163632176 -35997974 - L2 LINE L2 -2 3311 2812 1412 234 36 36 chr5 163632176 163632339 -35997811 - MER58B DNA MER1_type -2079 341 179 2196 80 0 42 chr5 163632339 163632652 -35997498 - AluSg SINE Alu -10 300 1 1412 234 36 36 chr5 163632652 163632825 -35997325 - MER58B DNA MER1_type -2240 180 5 1089 260 84 57 chr5 163632825 163633007 -35997143 - L2 LINE L2 -501 2812 2636 187 277 125 54 chr5 163632943 163633055 -35997095 - MIR3 SINE MIR -39 169 50 * 224 260 13 39 chr5 163634450 163634519 -35995631 - MIR SINE MIR -76 132 66 756 319 36 4 chr5 163634519 163634770 -35995380 + MIR SINE MIR 4 262 0 1228 118 6 0 chr5 163634771 163634940 -35995210 + FAM SINE Alu 1 170 -5 715 242 27 92 chr5 163635170 163635221 -35994929 - MIR SINE MIR -2 260 207 856 180 106 0 chr5 163635221 163635382 -35994768 + MER45A DNA AcHobo 1 178 0 715 242 27 92 chr5 163635382 163635590 -35994560 - MIR SINE MIR -55 207 18 2131 109 7 0 chr5 163635790 163636083 -35994067 + AluSx SINE Alu 1 295 -17 328 267 67 29 chr5 163636159 163636264 -35993886 + MIR SINE MIR 56 164 -98 415 199 199 28 chr5 163636646 163636787 -35993363 - L2 LINE L2 0 3313 3149 304 288 126 0 chr5 163636872 163636983 -35993167 + L2 LINE L2 2601 2725 -589 2662 128 85 71 chr5 163636990 163637567 -35992583 - LTR24B LTR ERV1 0 635 1 2210 80 11 0 chr5 163637620 163637907 -35992243 + AluSx SINE Alu 1 290 -22 263 287 73 7 chr5 163637949 163638085 -35992065 - L2 LINE L2 -83 3230 3086 224 69 0 0 chr5 163638924 163638953 -35991197 - MIR SINE MIR -117 145 117 440 297 41 7 chr5 163639289 163639434 -35990716 - MIR SINE MIR -94 168 19 2540 20 40 0 chr5 163639886 163640185 -35989965 - AluY SINE Alu 0 311 1 261 295 86 9 chr5 163640386 163640491 -35989659 + L2 LINE L2 2920 3032 -281 217 263 81 71 chr5 163640938 163641037 -35989113 + MIR3 SINE MIR 109 208 0 674 208 87 58 chr5 163641098 163641305 -35988845 + MIR SINE MIR 44 256 -6 292 102 82 0 chr5 163641856 163641905 -35988245 + L2 LINE L2 3259 3311 -2 * 740 310 128 47 chr5 163641895 163642156 -35987994 + L3 LINE CR1 1015 1254 -323 2187 100 0 10 chr5 163642156 163642456 -35987694 - AluSq SINE Alu -16 297 1 740 310 128 47 chr5 163642456 163642703 -35987447 + L3 LINE CR1 1254 1564 -13 1763 153 20 0 chr5 163642928 163643222 -35986928 + AluSx SINE Alu 1 300 -12 243 187 0 93 chr5 163645403 163645478 -35984672 - L1MB1 LINE L1 -1 6188 6121 628 117 144 0 chr5 163645478 163645589 -35984561 - FLAM_A SINE Alu -4 129 3 480 208 30 20 chr5 163646627 163646728 -35983422 - AluJb SINE Alu -92 220 119 262 167 0 0 chr5 163646772 163646814 -35983336 - FLAM_A SINE Alu -8 125 84 449 251 224 11 chr5 163647003 163647182 -35982968 + MIR SINE MIR 46 262 0 2143 90 20 3 chr5 163647997 163648297 -35981853 - AluSq SINE Alu -8 305 1 1120 278 213 36 chr5 163648698 163649176 -35980974 + MLT1G1 LTR MaLR 5 587 0 2107 112 3 0 chr5 163649726 163650029 -35980121 - AluSx SINE Alu -8 304 1 1452 152 50 26 chr5 163650076 163650379 -35979771 - AluJo SINE Alu -2 310 1 197 264 44 44 chr5 163651773 163651864 -35978286 - L2 LINE L2 -188 3084 2994 320 272 83 92 chr5 163651972 163652189 -35977961 - L1MC4 LINE L1 -2 8040 7826 259 307 30 10 chr5 163652540 163652641 -35977509 - L2 LINE L2 -185 3087 2985 209 320 84 65 chr5 163653125 163653400 -35976750 + L2 LINE L2 2932 3211 -61 540 289 233 47 chr5 163654091 163654292 -35975858 + L3 LINE CR1 331 493 -1084 1454 133 149 0 chr5 163654292 163654540 -35975610 + AluJb SINE Alu 6 290 -22 540 289 233 47 chr5 163654540 163654788 -35975362 + L3 LINE CR1 493 864 -713 2169 83 3 3 chr5 163654798 163655088 -35975062 - AluSp SINE Alu -22 291 2 1216 169 18 22 chr5 163655159 163655384 -35974766 - MER58A DNA MER1_type 0 224 1 656 230 50 0 chr5 163656098 163656237 -35973913 - MIR3 SINE MIR -43 165 20 304 265 165 18 chr5 163656296 163656466 -35973684 - MIR SINE MIR -34 228 34 907 261 78 27 chr5 163656466 163656761 -35973389 + L1MC4a LINE L1 5602 5911 -1897 649 309 92 16 chr5 163657619 163657936 -35972214 - MER102b DNA MER1_type 0 341 1 438 263 34 8 chr5 163659752 163659870 -35970280 + L2 LINE L2 3193 3313 0 1338 183 13 29 chr5 163660038 163660344 -35969806 - L1MB8 LINE L1 -18 6160 5860 221 319 129 12 chr5 163660838 163661001 -35969149 - MIR3 SINE MIR -18 190 9 215 256 33 141 chr5 163662855 163662976 -35967174 + MER5A DNA MER1_type 19 126 -63 2019 139 17 3 chr5 163663163 163663458 -35966692 - AluSq SINE Alu -14 299 1 285 267 20 10 chr5 163663459 163663560 -35966590 - MLT1K LTR MaLR -6 582 481 260 235 0 0 chr5 163663686 163663737 -35966413 - MLT1K LTR MaLR -370 218 168 270 270 115 34 chr5 163664722 163664870 -35965280 - L2 LINE L2 -3 3269 3110 334 306 0 20 chr5 163665019 163665117 -35965033 - MIR3 SINE MIR -9 199 104 1703 163 13 23 chr5 163665913 163666214 -35963936 - AluJb SINE Alu -2 310 13 645 142 57 161 chr5 163666256 163666467 -35963683 + MER5A DNA MER1_type 1 189 0 391 317 117 0 chr5 163666681 163666826 -35963324 - L3 LINE CR1 -8 1569 1408 1750 156 13 36 chr5 163666946 163667247 -35962903 + AluJb SINE Alu 1 294 -18 476 310 29 17 chr5 163667274 163667448 -35962702 - L3 LINE CR1 -139 1438 1263 205 244 42 118 chr5 163667854 163667973 -35962177 - MIR SINE MIR -74 188 79 512 165 41 10 chr5 163668088 163668185 -35961965 - AluJb SINE Alu -18 294 195 266 291 60 60 chr5 163668333 163668450 -35961700 - L2 LINE L2 -1 3312 3196 190 233 0 23 chr5 163668475 163668518 -35961632 + MIR SINE MIR 108 149 -113 221 155 0 121 chr5 163668541 163668599 -35961551 + MER5A DNA MER1_type 26 76 -113 712 141 247 24 chr5 163668715 163668764 -35961386 - MER3 DNA MER1_type 0 209 172 1867 151 38 10 chr5 163668764 163669056 -35961094 + AluJb SINE Alu 1 300 -12 712 141 247 24 chr5 163669056 163669176 -35960974 - MER3 DNA MER1_type -37 172 2 205 276 35 0 chr5 163669395 163669453 -35960697 - MER5B DNA MER1_type -31 147 88 670 232 87 5 chr5 163669644 163669829 -35960321 - MIR SINE MIR -51 211 12 238 315 169 37 chr5 163670312 163670715 -35959435 + L2 LINE L2 2817 3272 0 2552 50 3 3 chr5 163671021 163671320 -35958830 + AluY SINE Alu 1 299 -12 262 146 143 12 chr5 163671990 163672076 -35958074 - MIR3 SINE MIR -52 156 60 236 290 47 28 chr5 163672923 163673030 -35957120 - MIR3 SINE MIR -37 171 63 576 255 20 13 chr5 163673349 163673502 -35956648 + MIR SINE MIR 106 259 -3 26 30 0 0 chr5 163673512 163673545 -35956605 + AT_rich Low_complexity Low_complexity 1 33 0 188 250 191 0 chr5 163674418 163674502 -35955648 - MER5A DNA MER1_type -33 156 57 328 256 101 36 chr5 163674516 163674684 -35955466 - MIR3 SINE MIR -24 184 6 430 261 118 6 chr5 163675605 163675766 -35954384 - MIR SINE MIR 0 262 84 859 235 30 21 chr5 163676157 163676391 -35953759 + MIR SINE MIR 21 256 -6 21 0 0 0 chr5 163677308 163677329 -35952821 + AT_rich Low_complexity Low_complexity 1 21 0 386 272 68 4 chr5 163677652 163677802 -35952348 + MIR SINE MIR 2 163 -45 316 271 180 0 chr5 163677900 163678022 -35952128 + L3 LINE CR1 1358 1501 -76 1251 130 0 27 chr5 163678069 163678254 -35951896 - AluSg/x SINE Alu -13 299 120 403 179 122 65 chr5 163679446 163679539 -35950611 - L2 LINE L2 0 3313 3210 1946 123 0 8 chr5 163679539 163679800 -35950350 - AluSx SINE Alu -53 259 1 403 179 122 65 chr5 163679800 163679829 -35950321 - L2 LINE L2 -103 3210 3184 1901 165 0 22 chr5 163680284 163680600 -35949550 + AluJo SINE Alu 4 312 0 463 269 8 0 chr5 163681402 163681521 -35948629 - MLT1I LTR MaLR -1 408 289 398 314 69 13 chr5 163681680 163681839 -35948311 + MIR SINE MIR 89 256 -6 575 205 58 70 chr5 163682193 163682364 -35947786 - MIR3 SINE MIR -9 199 31 396 0 0 0 chr5 163683382 163683426 -35946724 + (CA)n Simple_repeat Simple_repeat 1 44 0 52 17 0 0 chr5 163683622 163683681 -35946469 + AT_rich Low_complexity Low_complexity 1 59 0 2051 139 23 0 chr5 163683758 163684059 -35946091 - AluSx SINE Alu -3 309 2 618 260 13 157 chr5 163684820 163685285 -35944865 + L1MC4a LINE L1 5512 5909 -1899 812 170 0 6 chr5 163685701 163685866 -35944284 + (TG)n Simple_repeat Simple_repeat 1 164 0 382 309 166 41 chr5 163685983 163686303 -35943847 + L2 LINE L2 2913 3272 0 297 197 0 0 chr5 163686432 163686498 -35943652 + CT-rich Low_complexity Low_complexity 4 69 0 663 200 7 7 chr5 163686514 163686649 -35943501 + MLT1K LTR MaLR 419 553 -35 7158 178 43 38 chr5 163686697 163687661 -35942489 - Ricksha DNA DNA -7 3239 2281 3074 112 22 20 chr5 163687661 163688168 -35941982 - L1PA15 LINE L1 -3 6162 5655 7158 178 43 38 chr5 163688168 163688455 -35941695 - Ricksha DNA DNA -965 2281 1997 2094 137 0 34 chr5 163688455 163688776 -35941374 - AluSx SINE Alu 0 312 3 7158 178 43 38 chr5 163688776 163689273 -35940877 - Ricksha DNA DNA -1249 1997 1504 1795 168 16 23 chr5 163689273 163689583 -35940567 + AluJb SINE Alu 1 308 -4 7158 178 43 38 chr5 163689583 163689959 -35940191 - Ricksha DNA DNA -1742 1504 1131 2125 138 7 0 chr5 163689959 163690263 -35939887 - AluSq SINE Alu -7 306 1 7158 178 43 38 chr5 163690263 163691148 -35939002 - Ricksha DNA DNA -2115 1131 1 2130 116 44 41 chr5 163691343 163691419 -35938731 - THE1B LTR MaLR 0 364 290 2057 115 18 0 chr5 163691419 163691705 -35938445 + AluSx SINE Alu 1 291 -21 2130 116 44 41 chr5 163691705 163691991 -35938159 - THE1B LTR MaLR -74 290 1 238 226 19 0 chr5 163692082 163692135 -35938015 - MIR SINE MIR -118 90 37 2373 165 46 18 chr5 163692838 163693292 -35936858 + MLT1C LTR MaLR 1 467 0 2530 206 43 0 chr5 163693407 163693896 -35936254 - MLT2B2 LTR ERVL -5 510 1 236 257 54 26 chr5 163693980 163694095 -35936055 + LTR33A LTR ERVL 431 521 -2 1695 109 0 144 chr5 163694217 163694564 -35935586 + AluSx SINE Alu 1 297 -5 291 209 36 79 chr5 163694579 163694718 -35935432 - HAL1b LINE L1 -7 1341 1209 256 341 76 0 chr5 163695469 163695680 -35934470 + L2 LINE L2 2856 3082 -231 196 338 54 0 chr5 163696191 163696265 -35933885 - L2 LINE L2 -63 3209 3132 188 293 68 60 chr5 163696343 163696476 -35933674 + MIR SINE MIR 59 192 -70 421 290 22 66 chr5 163697662 163697845 -35932305 + L3 LINE CR1 1312 1486 -91 1023 89 0 0 chr5 163698192 163698316 -35931834 + AluJb SINE Alu 1 124 -188 296 125 62 0 chr5 163698341 163698389 -35931761 + LTR50 LTR ERVL 745 795 0 330 304 6 22 chr5 163699812 163699993 -35930157 + (CA)n Simple_repeat Simple_repeat 1 178 0 417 294 5 33 chr5 163700035 163700219 -35929931 + (CA)n Simple_repeat Simple_repeat 2 180 0 2718 101 41 10 chr5 163700949 163701364 -35928786 + MSTA LTR MaLR 1 428 0 828 266 148 46 chr5 163701433 163701478 -35928672 - MLT1H1 LTR MaLR -15 540 501 1814 155 19 0 chr5 163701478 163701749 -35928401 - AluJo SINE Alu -12 300 25 828 266 148 46 chr5 163701749 163701791 -35928359 - MLT1H1 LTR MaLR -54 501 465 3290 107 12 12 chr5 163701791 163702304 -35927846 - LTR10D LTR ERV1 0 513 1 828 266 148 46 chr5 163702304 163702669 -35927481 - MLT1H1 LTR MaLR -90 465 41 2033 148 23 3 chr5 163702814 163703118 -35927032 - AluSx SINE Alu -2 310 1 1023 246 68 89 chr5 163703206 163703285 -35926865 - MLT1K LTR MaLR -3 473 394 2446 88 3 0 chr5 163703285 163703591 -35926559 + AluSp SINE Alu 1 307 -6 1023 246 68 89 chr5 163703591 163703994 -35926156 - MLT1K LTR MaLR -82 394 1 946 200 93 133 chr5 163704642 163705168 -35924982 + MLT1J LTR MaLR 4 508 -3 268 301 68 92 chr5 163705233 163705396 -35924754 - L3 LINE CR1 -54 1523 1365 228 111 0 0 chr5 163705781 163705817 -35924333 + (TAA)n Simple_repeat Simple_repeat 2 37 0 228 318 23 11 chr5 163706094 163706182 -35923968 - MIR SINE MIR -111 151 63 295 323 61 43 chr5 163706243 163706522 -35923628 + L2 LINE L2 2950 3233 -39 266 307 35 9 chr5 163706625 163706739 -35923411 - MIR3 SINE MIR -30 178 62 453 308 29 17 chr5 163707320 163707492 -35922658 - MIR3 SINE MIR -32 176 3 251 255 113 78 chr5 163707492 163707615 -35922535 + L2 LINE L2 2884 3011 -261 2308 100 7 0 chr5 163707825 163708116 -35922034 + AluSg1 SINE Alu 2 294 -15 399 192 0 0 chr5 163708268 163708341 -35921809 + MER117 DNA MER1_type 14 86 -111 743 243 7 0 chr5 163708365 163708513 -35921637 - FRAM SINE Alu -16 150 2 295 175 163 25 chr5 163709148 163709228 -35920922 + MIR SINE MIR 77 167 -95 763 164 88 12 chr5 163709253 163709424 -35920726 + MLT1C LTR MaLR 3 186 -281 821 168 0 15 chr5 163709424 163709561 -35920589 + AluJo SINE Alu 2 136 -176 900 196 58 97 chr5 163709566 163709877 -35920273 + MLT1C LTR MaLR 169 467 0 268 303 34 0 chr5 163710210 163710299 -35919851 + L2 LINE L2 3150 3241 -31 724 234 156 0 chr5 163710303 163710495 -35919655 - MIR SINE MIR -28 234 13 1553 186 10 7 chr5 163710875 163711171 -35918979 + AluJo SINE Alu 1 297 -15 2061 87 0 24 chr5 163711171 163711501 -35918649 + AluSc SINE Alu 1 323 0 2109 130 0 0 chr5 163711504 163711811 -35918339 + AluSx SINE Alu 3 309 -3 310 254 74 33 chr5 163712477 163712599 -35917551 - MER117 DNA MER1_type -48 149 23 724 233 0 58 chr5 163713024 163713196 -35916954 + FRAM SINE Alu 1 161 -15 607 170 25 13 chr5 163713218 163713377 -35916773 + GA-rich Low_complexity Low_complexity 2 162 0 1832 158 0 34 chr5 163713682 163714005 -35916145 - AluJb SINE Alu 0 312 1 2281 98 0 0 chr5 163714326 163714623 -35915527 - AluSg SINE Alu -13 297 1 738 191 0 8 chr5 163714734 163714860 -35915290 + FLAM_A SINE Alu 5 129 -4 244 306 157 9 chr5 163714969 163715077 -35915073 - MIR SINE MIR -63 145 22 2242 110 7 0 chr5 163715606 163715916 -35914234 + AluSx SINE Alu 1 312 0 2268 90 3 0 chr5 163716041 163716340 -35913810 + AluSx SINE Alu 1 300 -12 2307 79 0 0 chr5 163716812 163717103 -35913047 + AluSx SINE Alu 1 291 -21 643 176 26 20 chr5 163717103 163717130 -35913020 - L1MA4 LINE L1 -158 6142 6117 2184 84 3 20 chr5 163717130 163717429 -35912721 - AluSq SINE Alu -19 294 1 643 176 26 20 chr5 163717429 163717554 -35912596 - L1MA4 LINE L1 -183 6117 5989 502 192 29 10 chr5 163717712 163717816 -35912334 - MLT1I LTR MaLR 0 409 304 226 232 18 0 chr5 163717875 163717931 -35912219 + AluS SINE Alu 9 65 -238 2849 127 2 30 chr5 163717931 163718361 -35911789 - L1MA4 LINE L1 -330 5970 5554 2146 102 7 0 chr5 163718361 163718654 -35911496 + AluSx SINE Alu 1 295 -17 2849 127 2 30 chr5 163718654 163718719 -35911431 - L1MA4 LINE L1 -746 5554 5489 951 151 0 0 chr5 163718719 163718871 -35911279 - AluSg/x SINE Alu 0 310 159 410 92 0 15 chr5 163719264 163719329 -35910821 + (TCC)n Simple_repeat Simple_repeat 2 65 0 356 250 106 15 chr5 163719905 163720037 -35910113 + MIR3 SINE MIR 65 208 0 420 294 0 29 chr5 163720386 163720522 -35909628 + MIR3 SINE MIR 36 167 -41 563 278 70 5 chr5 163721097 163721284 -35908866 + MIR SINE MIR 10 208 -54 246 250 62 0 chr5 163721595 163721659 -35908491 + MER5A DNA MER1_type 116 183 -6 221 309 48 0 chr5 163721700 163721784 -35908366 - MIR SINE MIR -77 131 44 782 242 20 5 chr5 163721825 163722023 -35908127 - MIR SINE MIR 0 262 62 464 281 120 46 chr5 163722143 163722360 -35907790 - MIR SINE MIR -10 252 20 1668 169 17 7 chr5 163722631 163722927 -35907223 - AluJb SINE Alu -13 299 1 471 362 62 9 chr5 163723161 163723385 -35906765 - L1ME LINE L1 -453 5709 5474 211 298 0 0 chr5 163723882 163723939 -35906211 - MIR3 SINE MIR -34 174 118 866 245 8 51 chr5 163724045 163724298 -35905852 + MIR SINE MIR 7 248 -14 676 182 0 25 chr5 163724311 163724432 -35905718 + FLAM_C SINE Alu 1 118 -15 25 31 0 0 chr5 163724438 163724470 -35905680 + AT_rich Low_complexity Low_complexity 1 32 0 481 298 82 6 chr5 163724620 163724778 -35905372 - MIR SINE MIR -88 174 5 2173 109 0 3 chr5 163725231 163725533 -35904617 + AluSg SINE Alu 1 301 -9 256 302 51 38 chr5 163725964 163726156 -35903994 - L2 LINE L2 -283 2989 2798 227 224 17 0 chr5 163726635 163726693 -35903457 - Tigger5 DNA MER2_type -20 2303 2245 1891 119 0 57 chr5 163726699 163727017 -35903133 + AluSx SINE Alu 1 300 -12 291 194 164 0 chr5 163727017 163727084 -35903066 + Tigger5 DNA MER2_type 2246 2323 0 192 212 0 0 chr5 163727084 163727117 -35903033 + L3 LINE CR1 1429 1461 -116 456 230 18 9 chr5 163728103 163728216 -35901934 - MIR3 SINE MIR -3 205 92 266 234 39 26 chr5 163728455 163728532 -35901618 + MIR SINE MIR 16 93 -115 2072 100 10 3 chr5 163728594 163728884 -35901266 + AluSg SINE Alu 1 292 -18 289 244 139 17 chr5 163729147 163729262 -35900888 - MIR3 SINE MIR -76 132 4 207 226 11 129 chr5 163729351 163729401 -35900749 + MIR3 SINE MIR 99 137 -71 1956 95 33 0 chr5 163729401 163729706 -35900444 + AluSx SINE Alu 1 314 0 207 226 11 129 chr5 163729706 163729746 -35900404 + MIR3 SINE MIR 137 180 -28 359 280 17 40 chr5 163730104 163730279 -35899871 + CT-rich Low_complexity Low_complexity 1 171 0 380 298 113 7 chr5 163730572 163730723 -35899427 + MIR3 SINE MIR 36 202 -6 260 264 16 83 chr5 163730952 163731073 -35899077 - MIR3 SINE MIR -19 189 77 2071 123 0 7 chr5 163731241 163731542 -35898608 - AluSx SINE Alu -13 299 1 239 253 165 0 chr5 163731870 163731949 -35898201 + MIR SINE MIR 74 165 -97 1682 117 9 114 chr5 163732007 163732349 -35897801 + AluJo SINE Alu 1 306 -6 247 308 17 51 chr5 163732350 163732467 -35897683 + MIR SINE MIR 150 262 0 467 281 189 10 chr5 163733019 163733215 -35896935 - MIR SINE MIR -12 250 20 247 235 108 69 chr5 163733557 163733659 -35896491 + MIR SINE MIR 19 124 -84 291 234 234 7 chr5 163734814 163734951 -35895199 + MIR SINE MIR 80 247 -15 248 326 28 28 chr5 163735045 163735151 -35894999 - MIR SINE MIR -71 137 41 199 299 0 39 chr5 163736016 163736093 -35894057 - L2 LINE L2 -38 3234 3161 467 335 24 6 chr5 163736227 163736394 -35893756 + MIR SINE MIR 18 187 -75 329 330 37 0 chr5 163736402 163736511 -35893639 - MIR3 SINE MIR -54 154 42 714 253 185 8 chr5 163738229 163738581 -35891569 + MER113 DNA MER1_type? 4 417 -104 953 104 0 21 chr5 163739010 163739154 -35890996 - AluJb SINE Alu -171 141 1 2246 90 0 3 chr5 163739350 163739649 -35890501 - AluSx SINE Alu -14 298 1 871 131 15 0 chr5 163739650 163739780 -35890370 - AluJo/FLAM SINE Alu -169 133 2 2223 101 0 0 chr5 163740458 163740754 -35889396 + AluSx SINE Alu 1 296 -16 273 376 69 5 chr5 163740923 163741125 -35889025 - L2 LINE L2 -482 2832 2618 561 194 151 44 chr5 163741223 163741429 -35888721 + L1MB8 LINE L1 5902 6129 -49 185 86 57 0 chr5 163741458 163741493 -35888657 + A-rich Low_complexity Low_complexity 4 40 0 360 280 20 67 chr5 163741999 163742058 -35888092 - MER117 DNA MER1_type -26 171 111 2209 105 0 0 chr5 163742058 163742354 -35887796 - AluSx SINE Alu -16 296 1 360 280 20 67 chr5 163742354 163742444 -35887706 - MER117 DNA MER1_type -86 111 29 503 247 96 12 chr5 163742660 163742826 -35887324 - MIR SINE MIR -70 192 13 209 341 34 11 chr5 163743024 163743112 -35887038 - MIR SINE MIR -65 143 54 270 0 0 0 chr5 163744077 163744107 -35886043 + (CA)n Simple_repeat Simple_repeat 2 31 0 275 291 9 36 chr5 163744227 163744337 -35885813 - MIR SINE MIR -56 152 46 978 183 0 0 chr5 163744389 163744553 -35885597 + FAM SINE Alu 1 164 -11 2184 88 7 3 chr5 163744660 163744955 -35885195 + AluSq SINE Alu 1 296 -17 610 336 80 4 chr5 163745200 163745438 -35884712 - MIR SINE MIR -1 261 6 2030 113 65 57 chr5 163746127 163746499 -35883651 - THE1C LTR MaLR 0 375 1 185 222 0 0 chr5 163746996 163747041 -35883109 - L2 LINE L2 -49 3223 3179 1831 118 21 18 chr5 163747511 163747790 -35882360 - AluJb SINE Alu -22 290 11 1843 162 3 3 chr5 163747922 163748230 -35881920 + AluJb SINE Alu 1 308 -4 301 243 45 156 chr5 163748230 163748466 -35881684 - MIR SINE MIR -5 257 47 340 341 89 0 chr5 163748975 163749098 -35881052 - L2 LINE L2 -1 3271 3138 2341 90 0 3 chr5 163749425 163749736 -35880414 + AluSx SINE Alu 1 310 -2 302 264 64 0 chr5 163749751 163749876 -35880274 - L2 LINE L2 -421 2893 2761 1600 117 183 8 chr5 163749919 163750176 -35879974 + AluSx SINE Alu 1 302 0 1255 264 120 41 chr5 163750367 163750618 -35879532 - MLT1D LTR MaLR 0 505 275 1548 187 47 3 chr5 163750618 163750917 -35879233 - AluJo SINE Alu 0 312 1 1255 264 120 41 chr5 163750917 163751131 -35879019 - MLT1D LTR MaLR -230 275 3 221 333 36 12 chr5 163751592 163751676 -35878474 - L3 LINE CR1 -693 884 799 301 264 174 0 chr5 163751806 163751971 -35878179 - MIR SINE MIR -32 230 39 2048 129 0 0 chr5 163752146 163752432 -35877718 + AluSx SINE Alu 1 286 -26 201 39 0 0 chr5 163752432 163752458 -35877692 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 454 333 17 6 chr5 163752500 163752674 -35877476 + L1ME4a LINE L1 5943 6118 -3 486 284 19 26 chr5 163752950 163753105 -35877045 - MIR SINE MIR -63 199 46 2244 94 10 0 chr5 163753433 163753732 -35876418 + AluSq SINE Alu 1 302 -11 563 318 17 0 chr5 163753761 163753937 -35876213 + MIR SINE MIR 84 262 0 433 306 52 0 chr5 163753981 163754115 -35876035 - L2 LINE L2 -9 3263 3123 872 218 46 102 chr5 163754824 163755109 -35875041 + MER41B LTR ERV1 354 622 -13 2266 95 0 6 chr5 163755232 163755547 -35874603 - AluSq SINE Alu 0 313 1 1463 130 19 130 chr5 163755559 163755737 -35874413 - AluJb SINE Alu -26 286 158 2057 104 0 0 chr5 163755737 163756049 -35874101 - AluSx SINE Alu 0 312 18 1463 130 19 130 chr5 163756049 163756192 -35873958 - AluJb SINE Alu -154 158 1 867 255 123 4 chr5 163756214 163756457 -35873693 - L1ME3 LINE L1 -5 6157 5886 1000 192 22 115 chr5 163756459 163756634 -35873516 - AluYb8 SINE Alu -8 310 177 1878 105 7 65 chr5 163756634 163756940 -35873210 - AluSx SINE Alu -24 288 1 1000 192 22 115 chr5 163756940 163757087 -35873063 - AluYb8 SINE Alu -141 177 18 422 227 0 10 chr5 163757105 163757202 -35872948 - L1ME3 LINE L1 -271 5891 5796 1892 107 0 4 chr5 163757209 163757470 -35872680 - AluSx SINE Alu -11 301 42 464 325 41 10 chr5 163757663 163757857 -35872293 + MIR SINE MIR 9 208 -54 1129 141 11 16 chr5 163757869 163758054 -35872096 + AluJo SINE Alu 121 304 -8 2348 106 3 0 chr5 163758256 163758567 -35871583 - AluSp SINE Alu -1 312 1 265 233 163 0 chr5 163759420 163759506 -35870644 - MIR SINE MIR -1 261 162 2034 172 47 41 chr5 163759509 163759553 -35870597 + MLT1C LTR MaLR 1 43 -424 2383 95 0 3 chr5 163759553 163759858 -35870292 + AluSg1 SINE Alu 1 304 -5 2034 172 47 41 chr5 163759858 163760277 -35869873 + MLT1C LTR MaLR 43 467 0 214 255 0 0 chr5 163760277 163760324 -35869826 - MIR SINE MIR -99 163 117 511 185 0 0 chr5 163760431 163760523 -35869627 - FLAM_C SINE Alu -8 135 44 315 278 78 17 chr5 163760954 163761069 -35869081 + MIR SINE MIR 21 142 -120 963 150 34 0 chr5 163761097 163761244 -35868906 + AluJo SINE Alu 1 152 -160 1545 144 0 61 chr5 163761255 163761532 -35868618 + AluSx SINE Alu 29 288 -24 1777 178 0 3 chr5 163761545 163761842 -35868308 + AluJb SINE Alu 1 296 -16 2594 65 0 0 chr5 163761842 163762150 -35868000 + AluY SINE Alu 1 308 -3 3161 157 37 12 chr5 163762152 163762865 -35867285 + L1M1 LINE L1 4760 5494 -743 2011 124 43 3 chr5 163762865 163763164 -35866986 + AluSq SINE Alu 1 311 -2 2134 127 3 10 chr5 163763182 163763496 -35866654 + AluSx SINE Alu 1 312 0 2174 128 3 10 chr5 163763861 163764174 -35865976 - AluSx SINE Alu -1 311 1 304 280 220 31 chr5 163764344 163764766 -35865384 - L2 LINE L2 0 3313 2812 2036 112 3 43 chr5 163765623 163765945 -35864205 - AluSx SINE Alu -3 309 1 2400 102 0 6 chr5 163766224 163766539 -35863611 + AluSq SINE Alu 1 313 0 2297 90 20 0 chr5 163766557 163766858 -35863292 + AluSg SINE Alu 1 307 -3 325 73 0 0 chr5 163766863 163766904 -35863246 + 5S rRNA rRNA 2 42 -79 2597 55 3 0 chr5 163767239 163767549 -35862601 + AluY SINE Alu 1 311 0 2176 130 0 10 chr5 163768269 163768577 -35861573 - AluSx SINE Alu -7 305 1 2089 128 0 0 chr5 163768604 163768892 -35861258 + AluSx SINE Alu 1 288 -24 194 62 31 0 chr5 163769540 163769572 -35860578 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 2084 155 0 0 chr5 163769842 163770146 -35860004 + AluJb SINE Alu 1 304 -8 1724 168 9 47 chr5 163770220 163770361 -35859789 + AluJo SINE Alu 1 146 -166 2129 111 0 0 chr5 163770361 163770670 -35859480 + AluSc SINE Alu 1 309 0 2233 115 0 10 chr5 163770673 163770977 -35859173 + AluSx SINE Alu 1 301 -11 1724 168 9 47 chr5 163770977 163771152 -35858998 + AluJo SINE Alu 148 310 -2 997 207 9 24 chr5 163771158 163771371 -35858779 - MSTD LTR MaLR 0 396 187 2342 90 0 0 chr5 163771405 163771695 -35858455 + AluSg1 SINE Alu 1 290 -19 596 144 0 48 chr5 163771695 163771799 -35858351 - AluJb SINE Alu -30 282 184 929 154 16 85 chr5 163771799 163771905 -35858245 - MSTD LTR MaLR -221 175 86 1625 188 0 33 chr5 163771905 163772209 -35857941 - AluJb SINE Alu -18 294 1 929 154 16 85 chr5 163772209 163772290 -35857860 - MSTD LTR MaLR -310 86 1 1823 237 106 9 chr5 163772336 163772977 -35857173 + Charlie2 DNA MER1_type 1933 2635 -227 2085 140 3 3 chr5 163773058 163773366 -35856784 + AluSx SINE Alu 1 308 -4 1696 162 37 0 chr5 163773375 163773685 -35856465 + AluJb SINE Alu 1 320 0 2150 63 50 40 chr5 163773851 163774151 -35855999 + AluY SINE Alu 2 304 -7 1265 119 0 11 chr5 163774159 163774344 -35855806 + AluSg/x SINE Alu 126 308 -2 356 195 37 12 chr5 163774345 163774427 -35855723 + Charlie2 DNA MER1_type 2773 2856 -6 1543 135 3 87 chr5 163774610 163774922 -35855228 + AluJo SINE Alu 5 290 -22 182 213 49 33 chr5 163774933 163774994 -35855156 + MIR SINE MIR 71 132 -76 2243 111 3 0 chr5 163775869 163776166 -35853984 + AluSx SINE Alu 1 298 -14 2099 102 0 14 chr5 163776631 163776935 -35853215 + AluSq SINE Alu 5 304 0 777 171 206 86 chr5 163776980 163777237 -35852913 + AluJo SINE Alu 1 288 -14 1116 163 0 17 chr5 163777315 163777493 -35852657 + FAM SINE Alu 1 47 -2 2270 100 3 0 chr5 163777493 163777784 -35852366 + AluSp SINE Alu 1 292 -21 2013 99 7 4 chr5 163777939 163778211 -35851939 + AluSg SINE Alu 1 273 -37 1811 125 26 30 chr5 163778616 163778921 -35851229 - AluSx SINE Alu -8 304 1 1889 170 0 3 chr5 163779121 163779410 -35850740 - AluJb SINE Alu -24 288 1 239 284 49 49 chr5 163779798 163779900 -35850250 + MLT1J2 LTR MaLR 67 168 -282 379 196 250 0 chr5 163780449 163780541 -35849609 + MER63 DNA MER1_type 676 790 -271 781 183 30 94 chr5 163780751 163780953 -35849197 - MER5A DNA MER1_type 0 189 1 213 159 23 0 chr5 163780997 163781041 -35849109 + MIR SINE MIR 50 94 -114 1880 131 30 20 chr5 163781407 163781704 -35848446 + AluJo SINE Alu 1 300 -12 1685 115 123 7 chr5 163781917 163782186 -35847964 + AluSx SINE Alu 1 300 -12 2259 77 10 13 chr5 163782645 163782943 -35847207 - AluSp SINE Alu -16 297 1 217 128 0 0 chr5 163783051 163783090 -35847060 + L2 LINE L2 3194 3232 -40 225 0 0 0 chr5 163783961 163783986 -35846164 + (T)n Simple_repeat Simple_repeat 1 25 0 1772 87 50 70 chr5 163784486 163784633 -35845517 - AluSx SINE Alu -20 292 153 189 0 0 0 chr5 163784633 163784654 -35845496 + (TG)n Simple_repeat Simple_repeat 2 22 0 1772 87 50 70 chr5 163784654 163784804 -35845346 - AluSx SINE Alu -159 153 1 2202 117 13 0 chr5 163785519 163785818 -35844332 - AluSx SINE Alu -9 303 1 374 89 0 0 chr5 163786081 163786137 -35844013 + Alu SINE Alu 246 301 -1 364 248 142 0 chr5 163786166 163786279 -35843871 + MIR SINE MIR 111 239 -23 775 195 128 67 chr5 163786514 163786736 -35843414 - L1MC4 LINE L1 -863 7179 6931 2034 110 46 0 chr5 163786736 163787017 -35843133 - AluSg SINE Alu -16 294 1 775 195 128 67 chr5 163787017 163787107 -35843043 - L1MC4 LINE L1 -1111 6931 6848 222 37 0 0 chr5 163789406 163789433 -35840717 + (A)n Simple_repeat Simple_repeat 1 27 0 2157 120 7 7 chr5 163791454 163791763 -35838387 - AluSg SINE Alu -1 309 1 668 214 8 8 chr5 163793075 163793206 -35836944 + FLAM_C SINE Alu 3 133 0 550 109 0 69 chr5 163793213 163793314 -35836836 - FLAM_C SINE Alu -15 128 35 2432 88 0 28 chr5 163793547 163793726 -35836424 - AluY SINE Alu 0 311 143 2630 47 0 0 chr5 163793726 163794026 -35836124 - AluY SINE Alu -11 300 1 2432 88 0 28 chr5 163794026 163794166 -35835984 - AluY SINE Alu -168 143 1 558 191 26 9 chr5 163794200 163794315 -35835835 - FLAM_C SINE Alu -15 118 2 1283 163 15 117 chr5 163795938 163796264 -35833886 - AluJo SINE Alu -9 293 1 2213 119 10 0 chr5 163796360 163796655 -35833495 - AluSx SINE Alu -14 298 1 22 35 0 0 chr5 163797936 163797965 -35832185 + AT_rich Low_complexity Low_complexity 1 29 0 258 160 0 0 chr5 163798794 163798844 -35831306 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 2276 110 0 0 chr5 163799509 163799809 -35830341 - AluSq SINE Alu -12 301 2 2089 125 7 0 chr5 163799821 163800118 -35830032 - AluSx SINE Alu -11 301 3 1808 149 0 39 chr5 163801048 163801356 -35828794 - AluJb SINE Alu -16 296 1 379 253 118 18 chr5 163801365 163801535 -35828615 - L1ME LINE L1 -302 5819 5633 1640 150 39 26 chr5 163802497 163802804 -35827346 - AluJb SINE Alu 0 312 2 1686 135 0 87 chr5 163802975 163803287 -35826863 - AluJb SINE Alu -27 285 1 843 119 8 0 chr5 163803306 163803424 -35826726 - AluJb SINE Alu -193 119 1 867 228 0 6 chr5 163803850 163804017 -35826133 - FAM SINE Alu -9 166 1 1707 169 10 17 chr5 163804026 163804363 -35825787 - AluJo SINE Alu 0 312 1 1529 161 46 19 chr5 163804635 163804895 -35825255 + AluJb SINE Alu 9 275 -37 204 204 0 0 chr5 163805274 163805318 -35824832 - L3 LINE CR1 -11 1566 1523 231 173 0 0 chr5 163805859 163805911 -35824239 + (TA)n Simple_repeat Simple_repeat 2 53 0 2187 114 3 3 chr5 163807194 163807492 -35822658 + AluSx SINE Alu 1 298 -14 2126 121 9 40 chr5 163809606 163809928 -35820222 + AluSx SINE Alu 1 312 0 207 182 0 0 chr5 163811271 163811315 -35818835 + A-rich Low_complexity Low_complexity 2 45 0 452 248 128 47 chr5 163813677 163813935 -35816215 - L1ME4a LINE L1 -294 5827 5549 1651 166 9 56 chr5 163813945 163814264 -35815886 - AluJo SINE Alu -8 304 1 1983 110 34 14 chr5 163814293 163814585 -35815565 - AluSq SINE Alu -15 298 1 23 0 0 0 chr5 163814723 163814746 -35815404 + AT_rich Low_complexity Low_complexity 1 23 0 1863 159 0 10 chr5 163814787 163815088 -35815062 - AluJb SINE Alu -14 298 1 256 328 86 47 chr5 163815507 163815635 -35814515 + L2 LINE L2 3137 3269 -3 2133 115 3 3 chr5 163815723 163816018 -35814132 - AluSx SINE Alu -17 295 1 816 170 7 41 chr5 163816043 163816190 -35813960 - FRAM SINE Alu -30 146 5 1695 125 32 4 chr5 163816341 163816622 -35813528 - L1MA4 LINE L1 -5 6295 6007 264 59 0 0 chr5 163818775 163818809 -35811341 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1371 146 20 106 chr5 163818811 163819113 -35811037 - AluJo SINE Alu -31 281 6 2090 105 7 7 chr5 163819783 163820078 -35810072 - AluSx SINE Alu -17 295 1 22 56 0 0 chr5 163822598 163822634 -35807516 + AT_rich Low_complexity Low_complexity 1 36 0 266 309 173 18 chr5 163822768 163822878 -35807272 + L2 LINE L2 3141 3267 -5 2310 105 0 16 chr5 163823337 163823652 -35806498 + AluSg SINE Alu 1 310 0 756 121 67 191 chr5 163823789 163823904 -35806246 - Charlie4a DNA MER1_type -1506 455 327 2085 105 58 0 chr5 163823904 163824199 -35805951 + AluSp SINE Alu 1 312 -1 756 121 67 191 chr5 163824199 163824217 -35805933 - Charlie4a DNA MER1_type -1634 327 308 1487 116 119 81 chr5 163824217 163824502 -35805648 + AluSx SINE Alu 1 296 -16 756 121 67 191 chr5 163824502 163824547 -35805603 - Charlie4a DNA MER1_type -1653 308 259 1841 159 18 0 chr5 163824547 163824830 -35805320 - AluSx SINE Alu -24 288 1 756 121 67 191 chr5 163824830 163824963 -35805187 - Charlie4a DNA MER1_type -1702 259 181 435 179 0 0 chr5 163824983 163825050 -35805100 + AluS SINE Alu 226 292 -17 1899 137 18 0 chr5 163825062 163825339 -35804811 + AluSq SINE Alu 1 282 -31 681 248 10 40 chr5 163825348 163825550 -35804600 - Charlie4a DNA MER1_type -312 196 1 193 325 122 59 chr5 163825876 163826113 -35804037 - L2 LINE L2 -68 3204 2953 871 195 98 5 chr5 163826537 163826752 -35803398 + L1MB7 LINE L1 5938 6172 -12 2540 58 0 13 chr5 163826850 163827162 -35802988 + AluSc SINE Alu 1 308 -1 217 274 48 0 chr5 163827205 163827267 -35802883 + L2 LINE L2 2605 2669 -645 1427 142 116 19 chr5 163827307 163827575 -35802575 + AluJb SINE Alu 9 302 -10 1983 147 6 19 chr5 163828280 163828594 -35801556 - AluSx SINE Alu -2 310 1 2228 114 3 0 chr5 163828604 163828901 -35801249 - AluSp SINE Alu -15 298 1 308 273 134 41 chr5 163829485 163829679 -35800471 + MIR SINE MIR 1 212 -50 2329 109 0 0 chr5 163829742 163830045 -35800105 + AluSx SINE Alu 1 303 -9 293 306 8 48 chr5 163830266 163830390 -35799760 + MER5A DNA MER1_type 71 189 0 208 252 92 84 chr5 163830614 163830663 -35799487 + L2 LINE L2 3193 3240 -73 2642 42 3 0 chr5 163830663 163830970 -35799180 - AluSp SINE Alu -5 308 1 208 252 92 84 chr5 163830970 163831039 -35799111 + L2 LINE L2 3240 3312 -1 2368 101 3 0 chr5 163831289 163831597 -35798553 + AluSp SINE Alu 1 309 -4 1218 187 0 22 chr5 163831915 163832140 -35798010 + AluJo SINE Alu 86 305 -7 24 53 0 0 chr5 163832206 163832244 -35797906 + AT_rich Low_complexity Low_complexity 1 38 0 603 272 19 6 chr5 163832268 163832426 -35797724 + MER5B DNA MER1_type 19 178 0 213 265 245 0 chr5 163832461 163832559 -35797591 + MIR SINE MIR 71 192 -70 26 0 0 0 chr5 163833292 163833318 -35796832 + AT_rich Low_complexity Low_complexity 1 26 0 227 286 0 0 chr5 163833381 163833444 -35796706 + L1ME1 LINE L1 6043 6105 -61 2072 121 3 16 chr5 163833445 163833751 -35796399 + AluSg SINE Alu 1 302 -8 2233 109 0 16 chr5 163833801 163834105 -35796045 - AluSx SINE Alu -13 299 1 2289 113 17 0 chr5 163834341 163834643 -35795507 + AluSx SINE Alu 1 307 -5 3124 94 7 42 chr5 163834714 163835170 -35794980 + MER1A DNA MER1_type 90 529 0 867 20 0 0 chr5 163835240 163835341 -35794809 + (TA)n Simple_repeat Simple_repeat 1 101 0 2388 93 3 0 chr5 163835341 163835642 -35794508 - AluSx SINE Alu -10 302 1 894 224 6 12 chr5 163836389 163836559 -35793591 + FAM SINE Alu 1 169 -6 803 173 0 30 chr5 163837034 163837167 -35792983 + AluJo SINE Alu 7 135 -177 660 206 64 21 chr5 163837244 163837385 -35792765 + Tigger2a DNA MER2_type 1 147 -287 252 0 0 0 chr5 163837385 163837413 -35792737 + (TA)n Simple_repeat Simple_repeat 1 28 0 673 138 0 161 chr5 163837416 163837501 -35792649 + Tigger2a DNA MER2_type 289 334 -2374 1744 110 126 8 chr5 163837501 163837764 -35792386 + AluSg1 SINE Alu 1 294 -15 673 138 0 161 chr5 163837764 163837852 -35792298 + Tigger2a DNA MER2_type 334 434 0 2045 91 3 46 chr5 163838542 163838849 -35791301 - AluSx SINE Alu -18 294 1 2217 116 0 0 chr5 163839000 163839292 -35790858 + AluSc SINE Alu 1 292 -17 781 148 59 0 chr5 163840165 163840300 -35789850 + L1ME1 LINE L1 5840 5982 -184 2275 102 3 10 chr5 163840504 163840818 -35789332 - AluSx SINE Alu 0 312 1 2082 136 0 0 chr5 163840932 163841227 -35788923 + AluSx SINE Alu 1 295 -17 2098 75 43 18 chr5 163841227 163841508 -35788642 + AluSq SINE Alu 1 289 -24 240 35 0 0 chr5 163844866 163844895 -35785255 + (A)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr5 163845173 163845195 -35784955 + AT_rich Low_complexity Low_complexity 1 22 0 2113 92 32 0 chr5 163845203 163845486 -35784664 + AluSx SINE Alu 1 292 -20 2072 93 4 7 chr5 163845763 163846041 -35784109 + AluSx SINE Alu 1 277 -35 2244 104 0 0 chr5 163846535 163846824 -35783326 + AluSx SINE Alu 3 291 -21 863 218 0 0 chr5 163846830 163846977 -35783173 + FRAM SINE Alu 1 146 -30 240 35 0 0 chr5 163846977 163847006 -35783144 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 264 264 0 0 chr5 163847073 163847126 -35783024 + L3 LINE CR1 1524 1576 -1 2421 78 3 3 chr5 163847498 163847807 -35782343 + AluSg SINE Alu 1 309 -1 1590 180 0 37 chr5 163847968 163848262 -35781888 - AluJo SINE Alu -29 283 1 269 273 15 0 chr5 163848298 163848364 -35781786 - MIR SINE MIR -90 118 52 800 142 33 0 chr5 163848489 163848609 -35781541 + FLAM_C SINE Alu 1 124 -19 2127 120 0 13 chr5 163848834 163849008 -35781142 - AluSx SINE Alu -5 307 137 2121 121 3 7 chr5 163849008 163849334 -35780816 - AluSq SINE Alu 0 313 1 2127 120 0 13 chr5 163849334 163849460 -35780690 - AluSx SINE Alu -175 137 11 1938 176 106 0 chr5 163849709 163850106 -35780044 - LTR47A LTR ERVL 0 452 14 276 100 0 0 chr5 163850106 163850146 -35780004 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 866 182 7 0 chr5 163850147 163850290 -35779860 - FRAM SINE Alu -32 144 1 2153 105 13 33 chr5 163850513 163850819 -35779331 - AluSx SINE Alu -12 300 1 2255 97 0 22 chr5 163850872 163851183 -35778967 + AluSg SINE Alu 1 304 -6 806 134 0 8 chr5 163851184 163851303 -35778847 - AluJb SINE Alu -194 118 1 423 0 0 0 chr5 163851339 163851386 -35778764 + (TG)n Simple_repeat Simple_repeat 2 48 0 23 33 0 0 chr5 163851386 163851416 -35778734 + AT_rich Low_complexity Low_complexity 1 30 0 287 175 189 42 chr5 163851430 163851573 -35778577 - L1ME4a LINE L1 -23 6098 5935 343 185 0 0 chr5 163851588 163851642 -35778508 + Alu SINE Alu 235 288 -14 2182 108 0 0 chr5 163851690 163851969 -35778181 + AluSg SINE Alu 1 279 -31 472 291 58 33 chr5 163851997 163852272 -35777878 - L1ME4a LINE L1 -207 5914 5633 509 295 50 36 chr5 163852652 163852930 -35777220 - L1ME4a LINE L1 -207 5914 5633 2194 102 7 0 chr5 163853404 163853718 -35776432 - AluSp SINE Alu 0 316 1 788 153 15 36 chr5 163853946 163854083 -35776067 + AluJb SINE Alu 2 135 -177 2436 83 0 0 chr5 163854297 163854597 -35775553 + AluSg SINE Alu 1 300 -10 2363 50 20 13 chr5 163855729 163856049 -35774101 - AluY SINE Alu 0 311 1 1779 143 7 18 chr5 163857248 163857527 -35772623 - AluSx SINE Alu -4 308 33 199 363 26 18 chr5 163857559 163857746 -35772404 - MIR SINE MIR -54 208 20 2315 76 10 0 chr5 163857845 163858136 -35772014 + AluSp SINE Alu 1 294 -19 322 278 108 72 chr5 163858515 163858709 -35771441 + L2 LINE L2 3070 3270 -2 377 304 29 0 chr5 163858921 163859023 -35771127 - L2 LINE L2 -18 3295 3191 2134 123 13 0 chr5 163859138 163859447 -35770703 - AluSq SINE Alu 0 313 1 2137 102 7 3 chr5 163859516 163859799 -35770351 + AluSx SINE Alu 1 284 -28 207 0 0 0 chr5 163859832 163859855 -35770295 + (CAA)n Simple_repeat Simple_repeat 2 24 0 351 245 7 47 chr5 163859890 163860025 -35770125 - MIR SINE MIR -71 137 27 2142 225 92 27 chr5 163860199 163861411 -35768739 - L1MC4 LINE L1 -95 7713 6453 1310 156 0 28 chr5 163861411 163861623 -35768527 - AluJb SINE Alu -106 206 1 337 267 48 0 chr5 163861627 163861732 -35768418 - L1MC4a LINE L1 -1353 6455 6346 * 2123 211 14 85 chr5 163861730 163861843 -35768307 - L1ME2 LINE L1 -10 6154 6035 1940 119 66 7 chr5 163861843 163862129 -35768021 + AluSx SINE Alu 1 303 -9 2123 211 14 85 chr5 163862129 163862597 -35767553 - L1ME2 LINE L1 -129 6035 5535 243 0 0 0 chr5 163862597 163862624 -35767526 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2077 121 0 7 chr5 163862627 163862916 -35767234 - AluSx SINE Alu -25 287 1 2124 111 0 13 chr5 163862919 163863217 -35766933 - AluSx SINE Alu -18 294 1 2123 211 14 85 chr5 163863217 163863270 -35766880 - L1ME2 LINE L1 -552 5612 5557 752 250 15 5 chr5 163863389 163863585 -35766565 + L1M4 LINE L1 4173 4370 -1776 2323 84 3 10 chr5 163863601 163863899 -35766251 + AluSq SINE Alu 3 298 -15 2198 86 4 4 chr5 163863903 163864182 -35765968 + AluSg SINE Alu 1 279 -31 2300 101 7 3 chr5 163864351 163864657 -35765493 - AluSq SINE Alu -6 307 1 237 65 0 0 chr5 163864659 163864690 -35765460 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 910 122 0 0 chr5 163864690 163864813 -35765337 - AluSg/x SINE Alu -31 279 157 2091 212 11 42 chr5 163864816 163865054 -35765096 + L1M4 LINE L1 4401 4645 -1501 1817 152 55 0 chr5 163865054 163865344 -35764806 + AluJo SINE Alu 1 306 -6 2091 212 11 42 chr5 163865344 163865672 -35764478 + L1M4 LINE L1 4645 4949 -1197 1745 139 34 7 chr5 163865678 163865972 -35764178 + ERVL-D LTR ERVL 5456 5757 -7 2114 165 38 48 chr5 163865972 163866284 -35763866 + MLT2D LTR ERVL 1 310 -104 2739 171 13 0 chr5 163866284 163866735 -35763415 - MSTB2 LTR MaLR 0 457 1 2114 165 38 48 chr5 163866735 163866840 -35763310 + MLT2D LTR ERVL 310 414 0 716 237 92 66 chr5 163866841 163867145 -35763005 + L2 LINE L2 2996 3307 -6 432 266 72 72 chr5 163867202 163867480 -35762670 - L1ME4a LINE L1 -227 5894 5617 427 323 162 23 chr5 163867841 163868661 -35761489 + L2 LINE L2 2040 2973 -341 504 222 84 38 chr5 163868757 163869044 -35761106 + MLT1L LTR MaLR 1 342 -273 1152 89 0 0 chr5 163869086 163869232 -35760918 - AluSg/x SINE Alu -2 308 163 492 124 0 95 chr5 163869234 163869339 -35760811 + AluJb SINE Alu 59 153 -159 2045 144 3 0 chr5 163869378 163869684 -35760466 + AluSx SINE Alu 1 307 -5 361 353 29 0 chr5 163869728 163869867 -35760283 + MIR SINE MIR 27 169 -93 2181 106 3 7 chr5 163870089 163870382 -35759768 + AluSx SINE Alu 1 292 -20 555 246 160 0 chr5 163870515 163870690 -35759460 + MIR SINE MIR 47 249 -13 481 269 0 8 chr5 163871554 163871673 -35758477 + LTR67 LTR ERVL 438 555 -2 265 299 0 35 chr5 163871921 163872008 -35758142 - L2 LINE L2 0 3272 3189 243 296 144 32 chr5 163872716 163872841 -35757309 + MIR3 SINE MIR 21 159 -49 * 524 294 107 72 chr5 163872832 163872987 -35757163 - L3 LINE CR1 -2 1575 1427 2142 111 0 10 chr5 163872987 163873298 -35756852 - AluSx SINE Alu 0 308 1 524 294 107 72 chr5 163873298 163873466 -35756684 - L3 LINE CR1 -150 1427 1232 2322 98 0 7 chr5 163873466 163873773 -35756377 - AluSc SINE Alu -3 306 2 524 294 107 72 chr5 163873773 163873838 -35756312 - L3 LINE CR1 -345 1232 1171 782 241 30 30 chr5 163873879 163874115 -35756035 + MIR SINE MIR 3 238 -24 296 275 12 0 chr5 163874326 163874406 -35755744 + L2 LINE L2 3201 3281 -32 231 208 19 0 chr5 163875228 163875281 -35754869 - MIR3 SINE MIR -47 161 108 275 276 0 0 chr5 163875488 163875564 -35754586 - MIR SINE MIR -97 111 36 276 243 142 53 chr5 163875835 163876004 -35754146 + MIR SINE MIR 77 260 -2 941 152 76 0 chr5 163876004 163876188 -35753962 + L1MA4 LINE L1 6087 6284 -16 33 0 0 0 chr5 163876193 163876226 -35753924 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr5 163876302 163876331 -35753819 + AT_rich Low_complexity Low_complexity 1 29 0 2095 120 13 3 chr5 163876548 163876849 -35753301 - AluSx SINE Alu -8 304 1 1937 153 10 0 chr5 163877170 163877471 -35752679 - AluJb SINE Alu -6 306 3 2295 108 0 37 chr5 163878010 163878334 -35751816 - AluSx SINE Alu 0 312 1 1475 215 39 36 chr5 163878416 163878932 -35751218 + L1ME2 LINE L1 5344 5909 -255 2263 104 0 3 chr5 163878932 163879231 -35750919 - AluSx SINE Alu -14 298 1 1475 215 39 36 chr5 163879231 163879257 -35750893 + L1ME2 LINE L1 5909 5933 -231 305 286 48 36 chr5 163879410 163879578 -35750572 - L2 LINE L2 0 3313 3144 2096 118 20 13 chr5 163879669 163879975 -35750175 - AluSx SINE Alu -4 308 1 2052 116 23 13 chr5 163880237 163880540 -35749610 - AluSx SINE Alu -6 306 1 256 274 0 0 chr5 163880585 163880647 -35749503 - L2 LINE L2 -679 2635 2574 377 300 44 82 chr5 163880712 163881005 -35749145 - L3 LINE CR1 -1007 570 289 368 229 117 88 chr5 163881008 163881213 -35748937 - MLT1K LTR MaLR -11 577 367 318 276 18 21 chr5 163881380 163881559 -35748591 - MIR SINE MIR -17 245 16 2402 83 0 7 chr5 163881868 163882170 -35747980 - AluSg SINE Alu -10 300 1 294 29 0 0 chr5 163882172 163882207 -35747943 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1785 135 4 8 chr5 163882311 163882571 -35747579 - AluSx SINE Alu -53 259 1 29 0 0 0 chr5 163882732 163882761 -35747389 + AT_rich Low_complexity Low_complexity 1 29 0 1324 169 146 11 chr5 163882921 163883181 -35746969 + AluJo SINE Alu 1 295 -17 21 0 0 0 chr5 163883293 163883314 -35746836 + AT_rich Low_complexity Low_complexity 1 21 0 1656 172 3 56 chr5 163883314 163883468 -35746682 - AluJb SINE Alu -25 287 155 2230 89 0 59 chr5 163883468 163883792 -35746358 - AluSq SINE Alu -8 305 1 1656 172 3 56 chr5 163883792 163883940 -35746210 - AluJb SINE Alu -157 155 1 258 284 30 0 chr5 163884056 163884123 -35746027 + L2 LINE L2 3242 3310 -3 2366 101 0 0 chr5 163884256 163884553 -35745597 - AluSg SINE Alu -13 297 1 1619 149 10 40 chr5 163884559 163884855 -35745295 - AluJb SINE Alu -8 304 18 545 219 258 0 chr5 163884855 163885033 -35745117 + L1MD2 LINE L1 6069 6292 -67 973 191 41 107 chr5 163885037 163885356 -35744794 - AluJo SINE Alu -4 298 1 897 168 6 19 chr5 163885360 163885521 -35744629 - FRAM SINE Alu -7 159 1 2161 149 3 14 chr5 163885589 163885958 -35744192 + MER47A DNA MER2_type 2 366 0 3243 176 97 62 chr5 163885978 163886734 -35743416 - L1MD2 LINE L1 -16 6343 5554 2260 133 0 0 chr5 163886734 163887043 -35743107 - AluSx SINE Alu -1 311 3 3243 176 97 62 chr5 163887043 163887113 -35743037 - L1MD2 LINE L1 -805 5554 5488 1703 177 26 36 chr5 163887123 163887476 -35742674 - L1MB8 LINE L1 0 6178 5828 2810 132 24 2 chr5 163887476 163887901 -35742249 - Tigger2a DNA MER2_type 0 434 1 1703 177 26 36 chr5 163887901 163887931 -35742219 - L1MB8 LINE L1 -350 5828 5799 445 92 132 0 chr5 163887981 163888057 -35742093 - L1MA4 LINE L1 -11 6289 6204 1293 150 77 22 chr5 163888848 163889122 -35741028 + L1MD1 LINE L1 5802 6090 -152 1816 159 13 36 chr5 163889122 163889455 -35740695 - AluJo SINE Alu 0 312 1 1350 265 129 50 chr5 163889536 163890275 -35739875 - L1MEd LINE L1 -5307 812 16 2163 89 14 0 chr5 163890293 163890573 -35739577 - AluSx SINE Alu -26 286 3 2182 92 7 4 chr5 163891239 163891520 -35738630 - AluSx SINE Alu -22 290 9 1235 104 0 15 chr5 163892233 163892494 -35737656 + (TTC)n Simple_repeat Simple_repeat 1 257 0 393 223 0 21 chr5 163892724 163892818 -35737332 + L1MC4 LINE L1 6614 6705 -1337 207 0 0 0 chr5 163893405 163893428 -35736722 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 597 169 0 105 chr5 163893431 163893555 -35736595 - FLAM_A SINE Alu -27 115 5 1902 183 45 0 chr5 163893910 163894243 -35735907 - MER7A DNA MER2_type 0 346 1 2338 86 3 0 chr5 163894615 163894907 -35735243 - AluSg1 SINE Alu -16 293 1 318 371 46 0 chr5 163895334 163895485 -35734665 - MIR3 SINE MIR -9 199 42 1086 280 96 21 chr5 163895489 163896015 -35734135 - L2 LINE L2 0 3313 2702 2352 110 0 0 chr5 163896015 163896325 -35733825 - AluSg SINE Alu 0 310 1 1086 280 96 21 chr5 163896325 163896448 -35733702 - L2 LINE L2 -611 2702 2590 842 136 8 0 chr5 163896463 163896588 -35733562 - AluJb SINE Alu -17 295 170 2487 78 0 0 chr5 163896907 163897203 -35732947 - AluSx SINE Alu -16 296 1 857 211 97 4 chr5 163897222 163897459 -35732691 - MIR SINE MIR -2 260 2 2153 132 0 0 chr5 163897624 163897920 -35732230 + AluSx SINE Alu 1 296 -16 1005 118 0 0 chr5 163898239 163898392 -35731758 + MER53 DNA DNA 23 175 -14 1836 101 0 0 chr5 163898647 163898885 -35731265 - AluSg/x SINE Alu -6 304 67 2380 112 0 0 chr5 163898915 163899227 -35730923 + AluSx SINE Alu 1 312 0 1230 171 71 7 chr5 163899227 163899507 -35730643 - MER33 DNA MER1_type -18 306 9 520 272 38 9 chr5 163899634 163899847 -35730303 - MIR SINE MIR -29 233 15 338 140 18 0 chr5 163900549 163900606 -35729544 - L1MC4a LINE L1 -1756 6052 5995 559 192 29 10 chr5 163900607 163900711 -35729439 - U6 snRNA snRNA -1 106 1 451 191 59 168 chr5 163900711 163900899 -35729251 + L2 LINE L2 2687 2894 -419 1843 117 62 7 chr5 163900899 163901172 -35728978 - AluSx SINE Alu -24 288 1 451 191 59 168 chr5 163901172 163901475 -35728675 + L2 LINE L2 2894 3138 -175 1273 180 105 80 chr5 163901484 163901722 -35728428 - LTR7 LTR ERV1 0 450 195 2392 84 0 19 chr5 163901722 163902033 -35728117 - AluY SINE Alu -6 305 1 1273 180 105 80 chr5 163902033 163902233 -35727917 - LTR7 LTR ERV1 -255 195 1 2165 106 3 7 chr5 163902308 163902600 -35727550 - AluSg SINE Alu -18 292 2 289 285 89 29 chr5 163902601 163902739 -35727411 - MIR SINE MIR -65 143 18 2161 118 3 3 chr5 163902834 163903140 -35727010 + AluSx SINE Alu 1 306 -6 1348 278 41 8 chr5 163903748 163904136 -35726014 - MLT1I LTR MaLR 0 409 9 189 313 10 40 chr5 163904234 163904333 -35725817 + L3 LINE CR1 1261 1356 -221 233 132 0 0 chr5 163904467 163904505 -35725645 - Alu SINE Alu -265 38 1 670 269 46 29 chr5 163904664 163904768 -35725382 - MER102b DNA MER1_type -1124 304 203 1188 264 122 12 chr5 163904768 163905261 -35724889 - MLT1H LTR MaLR -2 547 1 670 269 46 29 chr5 163905261 163905394 -35724756 - MER102b DNA MER1_type -1225 203 63 914 185 52 63 chr5 163905702 163905972 -35724178 - MER20B DNA MER1_type -2 781 515 2539 47 0 0 chr5 163906103 163906399 -35723751 - AluY SINE Alu -15 296 1 454 202 149 44 chr5 163906584 163906698 -35723452 - MER20B DNA MER1_type -567 216 91 273 151 0 0 chr5 163907228 163907281 -35722869 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 2377 75 0 3 chr5 163907282 163907575 -35722575 - AluSc SINE Alu -14 295 4 2046 146 3 3 chr5 163907775 163908077 -35722073 - AluJb SINE Alu -9 303 2 650 222 90 58 chr5 163908086 163908429 -35721721 - L1ME LINE L1 -302 5819 5466 1250 171 68 13 chr5 163909162 163909396 -35720754 - AluJo SINE Alu -7 305 59 350 284 200 0 chr5 163909408 163909598 -35720552 - L1MC4 LINE L1 0 8042 7815 2410 92 0 7 chr5 163909626 163909931 -35720219 + AluSc SINE Alu 1 303 -6 788 257 150 6 chr5 163910018 163910372 -35719778 - L2 LINE L2 -995 2319 1915 393 211 18 37 chr5 163910433 163910542 -35719608 - MIR SINE MIR -69 139 33 358 248 53 26 chr5 164110982 164111095 -35519055 + L3 LINE CR1 946 1061 -516 612 324 142 10 chr5 164111583 164112000 -35518150 - MLT1K LTR MaLR 0 588 117 689 275 36 0 chr5 164112015 164112208 -35517942 + MLT1L LTR MaLR 354 553 -62 321 217 87 78 chr5 164112317 164112432 -35517718 + L1MCa LINE L1 1961 2076 -4350 * 332 286 79 58 chr5 164112330 164112894 -35517256 - L1MC4 LINE L1 -12 7949 6586 366 242 70 31 chr5 164112708 164112836 -35517314 + L1MCa LINE L1 1933 2065 -4361 185 0 0 39 chr5 164113052 164113078 -35517072 + (TAA)n Simple_repeat Simple_repeat 3 27 0 363 238 86 33 chr5 164113089 164113240 -35516910 + Charlie8 DNA MER1_type 127 285 -2132 316 267 56 0 chr5 164113438 164113528 -35516622 - MIR SINE MIR -70 192 98 846 111 90 62 chr5 164113828 164113859 -35516291 - AluJb SINE Alu -9 303 274 243 0 0 0 chr5 164113859 164113886 -35516264 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 846 111 90 62 chr5 164113886 164113998 -35516152 - AluJb SINE Alu -38 274 156 2089 122 3 16 chr5 164114131 164114434 -35515716 - AluSx SINE Alu -13 299 1 206 346 79 39 chr5 164114701 164114828 -35515322 - L2 LINE L2 -16 3256 3125 * 369 285 72 75 chr5 164114816 164115259 -35514891 + L2 LINE L2 2678 3254 -18 230 330 62 27 chr5 164115501 164115613 -35514537 + L3 LINE CR1 987 1102 -475 427 293 17 46 chr5 164115971 164116145 -35514005 + MIR SINE MIR 23 191 -71 349 291 146 31 chr5 164116236 164116490 -35513660 + L3 LINE CR1 1189 1471 -106 297 0 0 0 chr5 164117062 164117095 -35513055 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 520 285 62 69 chr5 164117096 164117580 -35512570 - L2 LINE L2 -36 3236 2750 2470 156 38 17 chr5 164117591 164118060 -35512090 + L1MB7 LINE L1 5696 6174 -10 514 287 37 24 chr5 164118756 164118920 -35511230 - MIR SINE MIR -6 256 91 342 115 0 0 chr5 164118963 164119015 -35511135 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 2167 119 17 0 chr5 164119015 164119317 -35510833 - AluSx SINE Alu -5 307 1 212 254 18 0 chr5 164119947 164120002 -35510148 + GA-rich Low_complexity Low_complexity 1 56 0 297 0 0 0 chr5 164120397 164120430 -35509720 + (TG)n Simple_repeat Simple_repeat 1 33 0 27 0 0 0 chr5 164120434 164120461 -35509689 + GC_rich Low_complexity Low_complexity 1 27 0 321 289 99 14 chr5 164121062 164121204 -35508946 - MIR3 SINE MIR -25 183 30 484 205 31 24 chr5 164121216 164121343 -35508807 + MIR SINE MIR 19 146 -62 239 239 14 42 chr5 164122163 164122234 -35507916 - MIR3 SINE MIR -1 207 139 494 244 96 87 chr5 164122242 164122398 -35507752 - L1ME4a LINE L1 -30 6091 5938 2546 75 0 0 chr5 164122398 164122703 -35507447 + AluSx SINE Alu 2 306 -6 494 244 96 87 chr5 164122703 164123017 -35507133 - L1ME4a LINE L1 -183 5938 5617 240 350 29 25 chr5 164123020 164123260 -35506890 - L1ME4a LINE L1 -2224 5584 5344 213 39 0 0 chr5 164124115 164124141 -35506009 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 2111 118 13 10 chr5 164124141 164124447 -35505703 - AluSx SINE Alu -5 307 1 484 265 126 0 chr5 164124629 164124780 -35505370 + MIR SINE MIR 72 241 -21 208 310 46 23 chr5 164126983 164127030 -35503120 - L2 LINE L2 -9 3263 3212 623 243 34 34 chr5 164127030 164127207 -35502943 - MER5B DNA MER1_type 0 178 2 208 310 46 23 chr5 164127207 164127246 -35502904 - L2 LINE L2 -60 3212 3175 355 258 65 0 chr5 164128115 164128239 -35501911 - L1MC4a LINE L1 -1862 5946 5815 2293 101 0 13 chr5 164128287 164128594 -35501556 - AluSx SINE Alu -9 303 1 33 25 0 0 chr5 164128594 164128634 -35501516 + AT_rich Low_complexity Low_complexity 1 40 0 1664 61 0 5 chr5 164128936 164129132 -35501018 - AluSq SINE Alu -118 195 1 372 252 202 35 chr5 164129135 164129393 -35500757 - L1MC4a LINE L1 -2201 5607 5307 302 343 66 12 chr5 164129496 164129662 -35500488 + MIR SINE MIR 46 220 -42 1441 104 0 0 chr5 164129913 164130096 -35500054 - AluSx SINE Alu -5 307 125 331 270 22 22 chr5 164130121 164130210 -35499940 - L1MC4 LINE L1 -1339 6703 6615 926 146 0 7 chr5 164130210 164130347 -35499803 - AluSx SINE Alu -177 136 1 836 222 13 0 chr5 164130374 164130527 -35499623 - FRAM SINE Alu -9 157 3 277 333 19 28 chr5 164130569 164130677 -35499473 + MIR SINE MIR 19 125 -137 447 68 0 0 chr5 164130727 164130786 -35499364 + (TTA)n Simple_repeat Simple_repeat 2 60 0 2392 95 0 0 chr5 164130788 164131082 -35499068 - AluSq SINE Alu -19 294 1 310 240 162 26 chr5 164131103 164131307 -35498843 + MIR SINE MIR 10 259 -3 2091 126 34 0 chr5 164131322 164131615 -35498535 + AluSx SINE Alu 5 307 -5 256 223 96 53 chr5 164131634 164131728 -35498422 - L2 LINE L2 -12 3260 3163 477 277 187 10 chr5 164132104 164132393 -35497757 - L2 LINE L2 -47 3266 2927 205 281 18 0 chr5 164133399 164133456 -35496694 + (TTCA)n Simple_repeat Simple_repeat 2 59 0 285 260 181 55 chr5 164133465 164133592 -35496558 - L2 LINE L2 -1 3271 3129 22 35 0 0 chr5 164133933 164133962 -35496188 + AT_rich Low_complexity Low_complexity 1 29 0 326 273 342 0 chr5 164134095 164134282 -35495868 - L1ME4a LINE L1 -7 6114 5864 235 303 81 0 chr5 164134466 164134565 -35495585 + MIR SINE MIR 86 192 -70 412 184 35 23 chr5 164134977 164135064 -35495086 - MIR SINE MIR -79 129 42 194 277 15 15 chr5 164135259 164135324 -35494826 - L2 LINE L2 -29 3243 3179 527 281 101 6 chr5 164135483 164135661 -35494489 + MIR SINE MIR 4 198 -64 1861 156 62 0 chr5 164136228 164136375 -35493775 - L1MA9 LINE L1 0 6312 6176 234 105 0 0 chr5 164136375 164136413 -35493737 + (TG)n Simple_repeat Simple_repeat 1 38 0 1861 156 62 0 chr5 164136413 164136604 -35493546 - L1MA9 LINE L1 -136 6176 5953 1900 136 16 3 chr5 164136604 164136912 -35493238 + L1MA9 LINE L1 5631 5942 -370 329 240 70 20 chr5 164137001 164137101 -35493049 + MIR SINE MIR 140 244 -18 1979 120 34 10 chr5 164137295 164137587 -35492563 - AluSx SINE Alu -13 299 1 224 283 278 10 chr5 164137722 164137920 -35492230 - L3 LINE CR1 -24 1553 1303 1726 178 14 3 chr5 164137937 164138224 -35491926 - AluJb SINE Alu -22 290 1 1578 176 12 4 chr5 164138666 164138921 -35491229 - AluJb SINE Alu -6 306 50 940 148 27 0 chr5 164138921 164139070 -35491080 - AluSg/x SINE Alu -6 306 154 318 111 0 0 chr5 164139074 164139119 -35491031 - AluJb SINE Alu -257 45 1 201 194 0 0 chr5 164139293 164139329 -35490821 - MIR SINE MIR -64 144 109 206 211 18 35 chr5 164139694 164139751 -35490399 - MIR SINE MIR -66 142 87 287 53 93 0 chr5 164139984 164140059 -35490091 + (TA)n Simple_repeat Simple_repeat 1 82 0 515 160 0 0 chr5 164140067 164140142 -35490008 - AluSg/x SINE Alu -21 288 214 218 69 103 17 chr5 164140142 164140200 -35489950 + (TTATA)n Simple_repeat Simple_repeat 1 63 0 500 97 65 29 chr5 164140214 164140562 -35489588 + (TTATA)n Simple_repeat Simple_repeat 1 360 0 2103 144 0 0 chr5 164140562 164140853 -35489297 - AluSx SINE Alu -21 291 1 480 274 109 46 chr5 164140916 164140988 -35489162 + MIR SINE MIR 4 70 -192 2363 113 48 22 chr5 164140988 164141343 -35488807 + THE1B LTR MaLR 1 364 0 480 274 109 46 chr5 164141343 164141445 -35488705 + MIR SINE MIR 70 189 -73 2676 129 36 10 chr5 164141450 164141867 -35488283 - MSTA LTR MaLR 0 428 1 234 400 0 20 chr5 164142024 164142124 -35488026 - MER5A DNA MER1_type -16 173 76 684 271 93 104 chr5 164142124 164142703 -35487447 - MLT1K LTR MaLR 0 588 16 229 278 14 28 chr5 164142710 164142782 -35487368 + MER5A DNA MER1_type 119 189 0 198 306 16 16 chr5 164143725 164143787 -35486363 - L2 LINE L2 -2 3270 3209 216 0 0 0 chr5 164143793 164143817 -35486333 + (TAA)n Simple_repeat Simple_repeat 2 25 0 783 257 78 51 chr5 164143839 164144135 -35486015 - L2 LINE L2 -1 3271 2968 250 261 44 53 chr5 164144490 164144607 -35485543 + MIR SINE MIR 1 125 -83 1508 169 54 30 chr5 164144722 164144994 -35485156 + AluJo SINE Alu 1 282 -30 336 24 0 0 chr5 164144994 164145035 -35485115 + (CA)n Simple_repeat Simple_repeat 1 41 0 1508 169 54 30 chr5 164145035 164145057 -35485093 + AluJo SINE Alu 282 302 -10 585 266 116 5 chr5 164145151 164145350 -35484800 + MIR SINE MIR 42 262 0 200 294 0 39 chr5 164145393 164145444 -35484706 - L2 LINE L2 -24 3248 3200 425 259 40 63 chr5 164145465 164145639 -35484511 - MIR SINE MIR -10 252 83 474 301 102 28 chr5 164145771 164145987 -35484163 + MIR SINE MIR 31 262 0 428 299 0 11 chr5 164146115 164146289 -35483861 + CT-rich Low_complexity Low_complexity 2 173 0 458 167 98 20 chr5 164146421 164146523 -35483627 + MER53 DNA DNA 2 111 -78 849 260 87 85 chr5 164146528 164146640 -35483510 - L2 LINE L2 -87 3226 3116 1776 162 58 0 chr5 164146640 164146918 -35483232 + AluSx SINE Alu 1 294 -18 849 260 87 85 chr5 164146918 164147619 -35482531 - L2 LINE L2 -197 3116 2383 36 23 0 0 chr5 164147767 164147810 -35482340 + AT_rich Low_complexity Low_complexity 1 43 0 1872 145 30 14 chr5 164148067 164148363 -35481787 - AluJb SINE Alu -11 301 1 432 292 41 70 chr5 164148872 164149115 -35481035 - MIR SINE MIR -15 247 12 296 246 27 64 chr5 164149723 164149833 -35480317 - MIR SINE MIR -18 244 139 747 198 166 114 chr5 164150429 164150480 -35479670 - LTR33A LTR ERVL -13 510 463 2007 128 0 10 chr5 164150480 164150769 -35479381 + AluSx SINE Alu 1 286 -26 747 198 166 114 chr5 164150769 164151181 -35478969 - LTR33A LTR ERVL -60 463 23 266 287 46 19 chr5 164152045 164152153 -35477997 - MIR SINE MIR 0 262 152 2101 102 4 7 chr5 164152470 164152744 -35477406 + AluSx SINE Alu 1 273 -39 287 243 54 63 chr5 164152987 164153098 -35477052 + L2 LINE L2 3128 3237 -35 2310 84 0 56 chr5 164153119 164153439 -35476711 + AluSg SINE Alu 1 302 -8 214 298 35 0 chr5 164153443 164153500 -35476650 + MIR SINE MIR 93 151 -111 255 385 27 7 chr5 164153872 164154020 -35476130 + L2 LINE L2 2607 2757 -557 2922 132 57 8 chr5 164154035 164154526 -35475624 - L1MC1 LINE L1 -1 6332 5818 569 281 25 60 chr5 164154841 164154987 -35475163 + MIR SINE MIR 21 158 -104 2347 100 0 0 chr5 164154987 164155277 -35474873 + AluSx SINE Alu 1 290 -22 569 281 25 60 chr5 164155277 164155365 -35474785 + MIR SINE MIR 158 247 -15 332 301 9 44 chr5 164155423 164155536 -35474614 + L2 LINE L2 3199 3307 -6 395 292 0 42 chr5 164155558 164155678 -35474472 + L2 LINE L2 3199 3313 0 2313 94 21 0 chr5 164155883 164156170 -35473980 - AluSg SINE Alu -17 293 1 278 254 0 104 chr5 164156383 164156517 -35473633 - L1MC5 LINE L1 -34 7927 7808 477 255 144 7 chr5 164156574 164156727 -35473423 - MIR SINE MIR -46 216 43 303 367 23 0 chr5 164157505 164157633 -35472517 + MIR SINE MIR 106 236 -26 927 215 44 48 chr5 164157868 164158119 -35472031 + MIR SINE MIR 11 260 -2 223 305 126 20 chr5 164158183 164158334 -35471816 - MIR3 SINE MIR -24 184 18 2320 105 0 7 chr5 164158898 164159203 -35470947 - AluSx SINE Alu -8 304 2 222 118 0 0 chr5 164159283 164159317 -35470833 + (ATGGTG)n Simple_repeat Simple_repeat 4 37 0 394 258 17 17 chr5 164159354 164159474 -35470676 - MIR SINE MIR -37 225 106 600 262 136 18 chr5 164159874 164160095 -35470055 - MIR SINE MIR -3 259 13 190 214 24 0 chr5 164160307 164160349 -35469801 - L2 LINE L2 -12 3301 3259 2396 92 3 0 chr5 164160423 164160729 -35469421 - AluSx SINE Alu -5 307 1 340 154 31 15 chr5 164160803 164160868 -35469282 + L2 LINE L2 3248 3313 0 384 313 50 50 chr5 164162124 164162183 -35467967 + MIR SINE MIR 9 67 -195 1941 134 38 10 chr5 164162183 164162475 -35467675 - AluJo SINE Alu -12 300 1 384 313 50 50 chr5 164162475 164162594 -35467556 + MIR SINE MIR 66 187 -75 410 288 0 46 chr5 164162595 164162748 -35467402 + MER5B DNA MER1_type 1 146 -32 304 229 69 6 chr5 164162931 164163036 -35467114 - MIR SINE MIR -55 207 97 393 167 37 28 chr5 164163448 164163556 -35466594 + L2 LINE L2 2932 3040 -273 3975 169 22 15 chr5 164163558 164164589 -35465561 - L1MB3 LINE L1 -207 5976 4937 347 204 142 0 chr5 164165443 164165556 -35464594 + MIR SINE MIR 17 145 -117 252 120 0 0 chr5 164165563 164165613 -35464537 + (TA)n Simple_repeat Simple_repeat 2 51 0 273 197 29 46 chr5 164166561 164166647 -35463503 - MIR SINE MIR -67 141 85 256 164 0 0 chr5 164167011 164167066 -35463084 + MIR SINE MIR 81 135 -73 324 0 0 0 chr5 164167727 164167763 -35462387 + (TA)n Simple_repeat Simple_repeat 2 37 0 23 33 0 0 chr5 164168405 164168435 -35461715 + AT_rich Low_complexity Low_complexity 1 30 0 263 219 59 59 chr5 164168607 164168696 -35461454 - L1ME4a LINE L1 -2 6119 6028 2420 81 7 3 chr5 164168696 164169005 -35461145 + AluSx SINE Alu 1 310 -2 263 219 59 59 chr5 164169005 164169034 -35461116 - L1ME4a LINE L1 -92 6029 6001 2330 85 0 0 chr5 164169820 164170101 -35460049 + AluSx SINE Alu 1 281 -31 346 186 142 18 chr5 164170305 164170418 -35459732 + L2 LINE L2 3182 3308 -5 207 304 43 11 chr5 164170467 164170559 -35459591 - MIR SINE MIR -92 116 22 205 160 20 40 chr5 164170922 164170972 -35459178 + MIR SINE MIR 23 71 -137 558 219 197 6 chr5 164171017 164171195 -35458955 + MIR SINE MIR 16 227 -35 683 157 81 66 chr5 164171322 164171520 -35458630 + MIR SINE MIR 27 227 -35 228 240 0 0 chr5 164171546 164171596 -35458554 + (CAT)n Simple_repeat Simple_repeat 1 50 0 1341 178 51 48 chr5 164172136 164172428 -35457722 + AluJo SINE Alu 1 293 -19 225 265 29 15 chr5 164172448 164172516 -35457634 + MIR SINE MIR 81 149 -59 2083 76 90 0 chr5 164172517 164172794 -35457356 + AluSx SINE Alu 1 302 -10 328 78 0 20 chr5 164172815 164172866 -35457284 + AluSc SINE Alu 244 293 -6 2239 100 3 0 chr5 164172874 164173173 -35456977 + AluY SINE Alu 3 302 -9 253 336 90 30 chr5 164173299 164173433 -35456717 - MIR SINE MIR -74 188 47 318 202 117 11 chr5 164173847 164173941 -35456209 - MER5A DNA MER1_type -36 153 50 432 247 0 0 chr5 164173961 164174058 -35456092 - L2 LINE L2 -6 3266 3170 256 284 0 0 chr5 164174371 164174445 -35455705 - MIR SINE MIR -95 113 40 209 132 26 0 chr5 164175018 164175056 -35455094 + (TA)n Simple_repeat Simple_repeat 1 39 0 1160 183 24 5 chr5 164175319 164175532 -35454618 - AluJo SINE Alu -20 292 76 208 340 104 9 chr5 164175682 164175788 -35454362 - L2 LINE L2 -5 3267 3152 262 282 191 29 chr5 164176260 164176537 -35453613 + L1ME2 LINE L1 5627 5948 -216 965 188 0 48 chr5 164176642 164176828 -35453322 + MER45A DNA AcHobo 2 178 0 1953 167 0 13 chr5 164176885 164177197 -35452953 - 7SLRNA srpRNA srpRNA -8 312 5 21 0 0 0 chr5 164177595 164177616 -35452534 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 164178362 164178400 -35451750 + AT_rich Low_complexity Low_complexity 1 38 0 2466 70 0 7 chr5 164178610 164178911 -35451239 - AluSq SINE Alu -14 299 1 287 254 0 0 chr5 164178960 164179031 -35451119 - L1MC/D LINE L1 -1944 5864 5794 243 319 43 9 chr5 164179384 164179500 -35450650 - MLT1L LTR MaLR 0 615 496 * 625 274 152 18 chr5 164179488 164179669 -35450481 - MLT1K LTR MaLR -144 444 289 2404 101 0 0 chr5 164179669 164179975 -35450175 - AluSc SINE Alu -3 306 1 625 274 152 18 chr5 164179975 164180070 -35450080 - MLT1K LTR MaLR -299 289 131 519 204 0 26 chr5 164180119 164180232 -35449918 + Charlie4a DNA MER1_type 44 153 -355 1027 169 90 0 chr5 164180237 164180426 -35449724 + AluJo SINE Alu 84 289 -23 1484 181 20 55 chr5 164180427 164180703 -35449447 + Charlie4a DNA MER1_type 158 422 -1539 2163 107 7 0 chr5 164180703 164181012 -35449138 + AluSx SINE Alu 1 311 0 1484 181 20 55 chr5 164181012 164181082 -35449068 + Charlie4a DNA MER1_type 422 493 -15 234 296 61 10 chr5 164181088 164181186 -35448964 - MLT1K LTR MaLR -483 105 3 316 285 67 36 chr5 164181244 164181409 -35448741 - MIR3 SINE MIR -31 177 8 1603 182 103 130 chr5 164181475 164181770 -35448380 + L1M4 LINE L1 2995 3297 -2849 523 114 0 25 chr5 164181770 164181841 -35448309 + AluS SINE Alu 2 72 -240 1470 82 5 10 chr5 164181841 164182037 -35448113 + AluY SINE Alu 114 308 -3 1603 182 103 130 chr5 164182044 164182429 -35447721 + L1M4 LINE L1 3297 3732 -2414 2268 89 11 0 chr5 164182659 164182968 -35447182 + AluSg SINE Alu 1 312 0 798 160 0 0 chr5 164182976 164183095 -35447055 + FLAM_C SINE Alu 1 119 -14 2200 103 0 52 chr5 164183118 164183263 -35446887 + AluSx SINE Alu 1 152 -160 2239 105 3 3 chr5 164183263 164183557 -35446593 + AluSx SINE Alu 1 294 -18 2200 103 0 52 chr5 164183557 164183740 -35446410 + AluSx SINE Alu 152 312 0 471 271 51 0 chr5 164183876 164184053 -35446097 + L2 LINE L2 2883 3068 -245 182 286 57 14 chr5 164184088 164184158 -35445992 + L2 LINE L2 3169 3241 -31 323 155 0 0 chr5 164184208 164184266 -35445884 - MIR SINE MIR -63 145 88 271 167 0 0 chr5 164184277 164184319 -35445831 + MER94 DNA DNA 2 43 -91 1063 222 112 72 chr5 164185002 164185507 -35444643 + MLT1H1 LTR MaLR 41 555 0 344 252 94 0 chr5 164185513 164185640 -35444510 + MIR SINE MIR 76 214 -48 30 27 0 0 chr5 164185799 164185836 -35444314 + AT_rich Low_complexity Low_complexity 1 37 0 330 286 0 11 chr5 164186286 164186377 -35443773 - MIR SINE MIR -70 192 103 1877 154 13 20 chr5 164186381 164186686 -35443464 + AluJb SINE Alu 1 303 -9 332 117 0 17 chr5 164186690 164186750 -35443400 + (GAAA)n Simple_repeat Simple_repeat 1 59 0 256 270 28 3 chr5 164186750 164186841 -35443309 - MIR SINE MIR -95 113 44 21 0 0 0 chr5 164187498 164187519 -35442631 + AT_rich Low_complexity Low_complexity 1 21 0 343 283 50 8 chr5 164187577 164187697 -35442453 + L2 LINE L2 3146 3270 -2 185 336 60 22 chr5 164187884 164188018 -35442132 + L2 LINE L2 3134 3272 0 2659 231 47 15 chr5 164188085 164188751 -35441399 + L1ME1 LINE L1 5363 6049 -117 876 140 0 110 chr5 164188751 164188915 -35441235 - FRAM SINE Alu -31 145 1 469 157 133 24 chr5 164188918 164189041 -35441109 + L1ME1 LINE L1 6037 6331 -3 24 32 0 0 chr5 164189057 164189088 -35441062 + AT_rich Low_complexity Low_complexity 1 31 0 339 364 0 8 chr5 164189111 164189240 -35440910 + L3 LINE CR1 1418 1545 -32 212 162 0 0 chr5 164189321 164189358 -35440792 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 444 277 27 7 chr5 164189549 164189697 -35440453 + L2 LINE L2 2548 2698 -616 250 237 40 0 chr5 164191386 164191462 -35438688 - L1ME LINE L1 -224 5897 5819 311 296 61 9 chr5 164191792 164191907 -35438243 - L2 LINE L2 0 3313 3193 367 195 17 76 chr5 164191919 164192037 -35438113 - L1ME LINE L1 -321 5800 5690 2327 100 0 0 chr5 164192081 164192381 -35437769 - AluSx SINE Alu -12 300 1 201 315 41 14 chr5 164192683 164192756 -35437394 - MIR SINE MIR -175 87 13 195 318 16 0 chr5 164193161 164193224 -35436926 + L2 LINE L2 3204 3267 -5 354 325 0 13 chr5 164193366 164193517 -35436633 + GA-rich Low_complexity Low_complexity 3 151 0 363 154 0 0 chr5 164193536 164193601 -35436549 + GA-rich Low_complexity Low_complexity 3 67 0 181 219 16 16 chr5 164193671 164193735 -35436415 + GA-rich Low_complexity Low_complexity 1 64 0 839 150 0 27 chr5 164194019 164194166 -35435984 + FLAM_C SINE Alu 1 143 0 6028 228 41 8 chr5 164194211 164195785 -35434365 + L1M4 LINE L1 2583 4208 -1938 210 344 73 47 chr5 164195830 164196022 -35434128 - L2 LINE L2 0 3272 3076 419 231 116 0 chr5 164197262 164197383 -35432767 + FLAM_C SINE Alu 9 143 0 2161 133 10 0 chr5 164197383 164197692 -35432458 + AluSx SINE Alu 1 312 0 318 352 0 0 chr5 164197692 164197820 -35432330 + L1ME LINE L1 5602 5729 -392 578 279 24 18 chr5 164197880 164198045 -35432105 - MIR SINE MIR -43 219 54 2003 139 20 7 chr5 164198075 164198376 -35431774 + AluJb SINE Alu 5 309 -3 21 0 0 0 chr5 164198392 164198413 -35431737 + AT_rich Low_complexity Low_complexity 1 21 0 27 49 0 0 chr5 164199618 164199659 -35430491 + AT_rich Low_complexity Low_complexity 1 41 0 2262 104 3 0 chr5 164199906 164200205 -35429945 + AluSx SINE Alu 1 300 -12 1552 202 0 17 chr5 164200417 164200704 -35429446 - AluJo SINE Alu -30 282 1 461 165 24 16 chr5 164201009 164201136 -35429014 + CT-rich Low_complexity Low_complexity 2 129 0 367 273 70 14 chr5 164201171 164201314 -35428836 - L1ME4a LINE L1 -7 6114 5964 4603 143 19 70 chr5 164201351 164201623 -35428527 - L1MB5 LINE L1 -36 6138 5853 1956 151 0 10 chr5 164201623 164201921 -35428229 - AluSx SINE Alu -17 295 1 4603 143 19 70 chr5 164201921 164201955 -35428195 - L1MB5 LINE L1 -321 5853 5819 1619 147 58 61 chr5 164201955 164202268 -35427882 - AluJo SINE Alu 0 312 1 4603 143 19 70 chr5 164202268 164202825 -35427325 - L1MB5 LINE L1 -355 5819 5319 2214 136 3 3 chr5 164202825 164203163 -35426987 - L1PA16 LINE L1 -21 6145 5808 * 3286 195 31 87 chr5 164203160 164203956 -35426194 - L1MB5 LINE L1 -814 5332 4602 943 226 24 0 chr5 164203956 164204168 -35425982 + U3 snRNA snRNA 1 217 0 3286 195 31 87 chr5 164204168 164204370 -35425780 - L1MB5 LINE L1 -1544 4602 4390 836 300 38 19 chr5 164204373 164204483 -35425667 - L1ME4a LINE L1 -218 5903 5797 517 227 109 0 chr5 164204483 164204602 -35425548 - FLAM_A SINE Alu -1 132 1 836 300 38 19 chr5 164204602 164204864 -35425286 - L1ME4a LINE L1 -324 5797 5524 375 320 27 0 chr5 164205058 164205205 -35424945 + L2 LINE L2 3110 3260 -12 427 238 48 0 chr5 164205241 164205346 -35424804 + L2 LINE L2 3200 3309 -4 265 248 56 40 chr5 164206587 164206712 -35423438 + L2 LINE L2 3187 3313 0 2198 98 35 0 chr5 164206870 164207156 -35422994 + AluSq SINE Alu 1 296 -17 261 316 10 10 chr5 164207593 164207691 -35422459 + MLT1K LTR MaLR 139 236 -352 286 272 0 33 chr5 164207943 164208035 -35422115 + MLT1K LTR MaLR 500 588 0 525 303 54 4 chr5 164208068 164208306 -35421844 - L1P1 LINE L1 -317 5838 5588 2077 116 7 17 chr5 164208473 164208774 -35421376 - AluSx SINE Alu -14 298 1 545 343 43 30 chr5 164209058 164209428 -35420722 - L2 LINE L2 -74 3198 2824 361 207 74 50 chr5 164210066 164210187 -35419963 + L2 LINE L2 2325 2448 -866 1969 248 61 17 chr5 164210382 164210907 -35419243 - L1ME3A LINE L1 -23 6147 5600 478 333 122 30 chr5 164210907 164211423 -35418727 + L2 LINE L2 2687 3255 -17 635 278 0 28 chr5 164211480 164211696 -35418454 + MIR SINE MIR 47 256 -6 426 214 8 63 chr5 164211693 164211819 -35418331 - MIR SINE MIR -54 208 90 * 467 274 121 26 chr5 164212038 164212464 -35417686 + L1MC/D LINE L1 5115 5578 -761 246 227 45 0 chr5 164212545 164212611 -35417539 + L1MC/D LINE L1 5687 5755 -2053 2460 69 0 0 chr5 164212632 164212922 -35417228 - AluY SINE Alu -21 290 1 1666 172 6 46 chr5 164213023 164213348 -35416802 + AluJo SINE Alu 1 312 0 192 152 0 0 chr5 164214149 164214182 -35415968 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 613 241 41 129 chr5 164214193 164214533 -35415617 - L2 LINE L2 -12 3301 2992 674 210 140 23 chr5 164214595 164214809 -35415341 + MIR SINE MIR 12 250 -12 2916 223 75 34 chr5 164214817 164215836 -35414314 + L1MD2 LINE L1 5079 6132 -227 1605 154 8 0 chr5 164215836 164216082 -35414068 + AluJo SINE Alu 1 248 -64 2218 94 10 26 chr5 164216317 164216626 -35413524 - AluSg SINE Alu -6 304 1 231 270 95 0 chr5 164216929 164217003 -35413147 - L3 LINE CR1 -1 1576 1496 689 288 117 49 chr5 164217160 164217173 -35412977 - L2 LINE L2 0 3272 3261 207 0 0 0 chr5 164217173 164217196 -35412954 + (TTCC)n Simple_repeat Simple_repeat 2 24 0 689 288 117 49 chr5 164217196 164217508 -35412642 - L2 LINE L2 -11 3261 2925 715 293 45 16 chr5 164217694 164217940 -35412210 + MIR SINE MIR 10 262 0 216 91 0 30 chr5 164219155 164219188 -35410962 + L2 LINE L2 3265 3296 -17 243 269 275 6 chr5 164219512 164219679 -35410471 + MIR SINE MIR 51 262 0 278 270 0 0 chr5 164219911 164219974 -35410176 + L2 LINE L2 3185 3247 -25 527 237 131 81 chr5 164221019 164221217 -35408933 - MIR SINE MIR 0 262 55 280 263 108 70 chr5 164221657 164221843 -35408307 - L2 LINE L2 -3 3310 3118 2097 151 16 0 chr5 164222210 164222515 -35407635 - AluSx SINE Alu -2 310 1 1713 215 55 14 chr5 164222837 164223255 -35406895 + MER113 DNA MER1_type? 2 436 -85 215 203 14 149 chr5 164224108 164224182 -35405968 + L2 LINE L2 3208 3271 -1 784 210 0 54 chr5 164224888 164225074 -35405076 + FRAM SINE Alu 1 176 0 4337 178 18 49 chr5 164225637 164225855 -35404295 - L1MB3 LINE L1 -1 6182 5959 1977 148 7 3 chr5 164225855 164226153 -35403997 - AluJb SINE Alu -13 299 1 4337 178 18 49 chr5 164226153 164226226 -35403924 - L1MB3 LINE L1 -224 5959 5885 2372 117 0 0 chr5 164226226 164226535 -35403615 - AluSg SINE Alu -1 309 1 4337 178 18 49 chr5 164226535 164227120 -35403030 - L1MB3 LINE L1 -298 5885 5339 2100 130 0 3 chr5 164227120 164227412 -35402738 - AluSx SINE Alu -21 291 1 4337 178 18 49 chr5 164227412 164227685 -35402465 - L1MB3 LINE L1 -844 5339 5059 378 57 0 0 chr5 164227774 164227827 -35402323 + (CA)n Simple_repeat Simple_repeat 2 54 0 189 311 8 74 chr5 164227846 164227968 -35402182 + MIR SINE MIR 16 129 -79 191 273 117 13 chr5 164228239 164228316 -35401834 - MIR SINE MIR -79 183 99 7311 45 21 17 chr5 164228484 164230056 -35400094 + SVA Other Other 1 1384 -2 500 124 48 138 chr5 164230094 164230161 -35399989 + LTR49-int LTR ERV1 3141 3190 -3141 2211 132 3 19 chr5 164230161 164230479 -35399671 - AluSq SINE Alu 0 313 1 500 124 48 138 chr5 164230479 164230556 -35399594 + LTR49-int LTR ERV1 3190 3272 -3059 325 200 0 0 chr5 164230616 164230676 -35399474 + LTR49-int LTR ERV1 3275 3334 -2997 482 184 20 0 chr5 164230741 164230839 -35399311 + LTR49-int LTR ERV1 3348 3447 -2884 665 324 25 62 chr5 164231949 164232270 -35397880 - L2 LINE L2 -50 3222 2914 1954 135 3 7 chr5 164232318 164232600 -35397550 + AluSx SINE Alu 1 281 -31 210 288 135 24 chr5 164232982 164233152 -35396998 + MER5A DNA MER1_type 1 189 0 * 615 301 12 66 chr5 164233152 164233406 -35396744 + MIR SINE MIR 9 248 -14 1479 284 86 4 chr5 164233735 164234235 -35395915 - MLT1K LTR MaLR -41 547 7 2011 168 21 0 chr5 164235323 164235657 -35394493 - MER58B DNA MER1_type 0 341 1 513 258 96 35 chr5 164235694 164235954 -35394196 - L1MC4a LINE L1 -1869 5939 5664 * 3248 195 49 6 chr5 164235953 164236605 -35393545 - L1MB8 LINE L1 0 6178 5491 2008 157 3 6 chr5 164236605 164236917 -35393233 - AluJb SINE Alu -1 311 1 3248 195 49 6 chr5 164236917 164236981 -35393169 - L1MB8 LINE L1 -687 5491 5431 180 0 0 0 chr5 164237016 164237036 -35393114 + (TG)n Simple_repeat Simple_repeat 2 21 0 2320 97 7 0 chr5 164237049 164237348 -35392802 - AluSp SINE Alu -10 303 3 2161 109 0 22 chr5 164237348 164237660 -35392490 - AluSx SINE Alu -7 305 1 595 360 92 0 chr5 164237703 164238139 -35392011 - L1MC4a LINE L1 -1941 5867 5392 426 275 39 96 chr5 164238609 164238787 -35391363 - MIR3 SINE MIR -22 186 19 2484 80 0 0 chr5 164238801 164239103 -35391047 + AluY SINE Alu 1 302 -9 188 268 214 9 chr5 164239214 164239326 -35390824 + MIR SINE MIR 41 175 -87 220 177 240 62 chr5 164239335 164239431 -35390719 + MIR SINE MIR 150 262 0 234 105 18 88 chr5 164239703 164239760 -35390390 + MER5B DNA MER1_type 1 53 -125 1626 160 85 0 chr5 164239771 164240053 -35390097 + AluJo SINE Alu 7 312 0 204 224 190 69 chr5 164240066 164240182 -35389968 - MER5B DNA MER1_type -48 130 1 * 343 161 8 78 chr5 164240177 164240301 -35389849 - MER5A DNA MER1_type 0 189 13 1385 309 72 9 chr5 164240349 164240876 -35389274 + MLT1K LTR MaLR 22 581 -7 295 315 0 37 chr5 164240974 164241082 -35389068 - MIR3 SINE MIR -22 186 83 228 196 59 78 chr5 164241376 164241478 -35388672 - L1ME4a LINE L1 -66 6055 5956 2227 98 10 7 chr5 164241531 164241828 -35388322 - AluSx SINE Alu -14 298 1 595 184 0 95 chr5 164242983 164243130 -35387020 + AluJo SINE Alu 1 133 -169 249 322 134 41 chr5 164243206 164243377 -35386773 - L3 LINE CR1 -985 592 406 364 291 19 19 chr5 164243489 164243592 -35386558 + MIR SINE MIR 32 134 -74 636 48 84 12 chr5 164243807 164244144 -35386006 + (TG)n Simple_repeat Simple_repeat 1 361 0 618 216 13 20 chr5 164244253 164244406 -35385744 - AluYa5 SINE Alu -150 161 10 967 163 10 20 chr5 164244416 164244618 -35385532 - MSTA LTR MaLR -228 200 1 1054 178 66 39 chr5 164244625 164244884 -35385266 - MER67C LTR ERV1 -332 378 113 275 116 43 58 chr5 164244907 164244976 -35385174 - L1MA8 LINE L1 -18 6273 6206 * 11822 156 25 41 chr5 164244966 164247247 -35382903 + L1PBa LINE L1 1 2244 -4619 1003 192 0 0 chr5 164247702 164247874 -35382276 - FRAM SINE Alu -10 166 1 199 154 0 185 chr5 164247884 164247949 -35382201 - MIR SINE MIR -154 108 56 539 235 90 30 chr5 164248487 164248653 -35381497 - MIR SINE MIR -74 188 13 969 190 0 0 chr5 164248695 164248858 -35381292 + AluJo SINE Alu 137 299 -3 989 204 145 31 chr5 164248999 164249382 -35380768 + L1ME1 LINE L1 5722 6120 -46 234 0 0 0 chr5 164249324 164249350 -35380800 + (TG)n Simple_repeat Simple_repeat 2 27 0 352 183 10 173 chr5 164249350 164249477 -35380673 + L1MA10 LINE L1 6249 6334 0 1822 171 13 16 chr5 164249482 164249787 -35380363 + AluJb SINE Alu 1 304 -8 306 0 0 0 chr5 164249789 164249823 -35380327 + (CA)n Simple_repeat Simple_repeat 2 35 0 204 267 0 0 chr5 164250220 164250265 -35379885 - L2 LINE L2 -13 3259 3215 545 198 0 0 chr5 164250705 164250831 -35379319 - L1 LINE L1 -2598 3548 3423 206 193 18 0 chr5 164250881 164250938 -35379212 + (CA)n Simple_repeat Simple_repeat 2 59 0 2020 166 0 6 chr5 164251012 164251326 -35378824 + AluJb SINE Alu 1 312 0 299 247 0 43 chr5 164251326 164251419 -35378731 + HAL1 LINE L1 2319 2407 -100 726 266 11 37 chr5 164251506 164251694 -35378456 + MIR SINE MIR 32 214 -48 554 187 81 101 chr5 164251770 164251968 -35378182 - MER21B LTR ERV1 -11 852 659 608 147 10 0 chr5 164251968 164252070 -35378080 + FRAM SINE Alu 62 164 -12 410 228 22 0 chr5 164252076 164252168 -35377982 - MER21B LTR ERV1 -767 96 3 312 267 20 10 chr5 164252875 164252976 -35377174 + MIR SINE MIR 52 153 -55 411 258 157 50 chr5 164253008 164253167 -35376983 - MER5A DNA MER1_type 0 189 14 2258 108 14 0 chr5 164253754 164254051 -35376099 - AluSx SINE Alu -11 301 1 339 204 91 11 chr5 164254064 164254152 -35375998 - L1ME2 LINE L1 -10 6154 6060 23 0 0 0 chr5 164254258 164254281 -35375869 + AT_rich Low_complexity Low_complexity 1 23 0 2107 115 0 4 chr5 164254296 164254575 -35375575 + AluSg SINE Alu 1 278 -32 831 112 0 0 chr5 164254575 164254700 -35375450 + (TTCC)n Simple_repeat Simple_repeat 3 127 0 1919 132 24 3 chr5 164254700 164254989 -35375161 - AluSx SINE Alu -17 295 1 2567 98 66 2 chr5 164254989 164255399 -35374751 - MER4C LTR ERV1 -29 436 1 468 0 0 0 chr5 164255642 164255694 -35374456 + (TG)n Simple_repeat Simple_repeat 2 53 0 466 335 60 5 chr5 164256233 164256418 -35373732 - MIR SINE MIR -57 205 11 450 284 64 7 chr5 164257315 164257456 -35372694 - MIR SINE MIR -1 261 113 406 266 187 19 chr5 164258368 164258582 -35371568 - MIR SINE MIR -12 250 1 257 279 114 38 chr5 164259284 164259442 -35370708 - L2 LINE L2 -257 3056 2887 228 284 49 49 chr5 164259848 164259950 -35370200 + MIR SINE MIR 23 124 -84 552 256 250 14 chr5 164259989 164260602 -35369548 - L2 LINE L2 -13 3300 2550 455 247 128 18 chr5 164261381 164261567 -35368583 - MIR SINE MIR -22 240 34 295 283 20 94 chr5 164262174 164262418 -35367732 - L2 LINE L2 -226 3046 2821 405 240 202 0 chr5 164262514 164262643 -35367507 + MIR SINE MIR 10 164 -98 559 0 14 14 chr5 164262645 164262717 -35367433 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 204 333 23 0 chr5 164262875 164262962 -35367188 - L2 LINE L2 -819 2495 2407 885 284 223 22 chr5 164263268 164263677 -35366473 - L2 LINE L2 -6 3307 2817 318 254 87 43 chr5 164263661 164263776 -35366374 - L2 LINE L2 -654 2660 2488 * 212 167 21 0 chr5 164263776 164263824 -35366326 + (TGGA)n Simple_repeat Simple_repeat 1 49 0 318 254 87 43 chr5 164263824 164263846 -35366304 - L2 LINE L2 -826 2488 2468 227 346 65 31 chr5 164264036 164264313 -35365837 - L2 LINE L2 -255 3017 2729 1264 113 0 0 chr5 164264565 164264733 -35365417 + AluSg/x SINE Alu 133 300 -10 607 266 46 0 chr5 164264734 164264907 -35365243 - MLT1K LTR MaLR -5 583 403 460 309 54 6 chr5 164264962 164265130 -35365020 - MLT1K LTR MaLR -278 310 135 186 43 0 0 chr5 164265196 164265219 -35364931 + (TG)n Simple_repeat Simple_repeat 2 24 0 255 339 54 27 chr5 164265267 164265379 -35364771 - MIR3 SINE MIR -54 154 40 249 227 0 15 chr5 164265815 164265881 -35364269 + MIR SINE MIR 65 129 -79 2391 95 20 0 chr5 164266524 164266829 -35363321 - AluSq SINE Alu -2 311 1 380 243 93 0 chr5 164266934 164267041 -35363109 - MER117 DNA MER1_type -80 117 1 27 0 0 0 chr5 164267631 164267658 -35362492 + AT_rich Low_complexity Low_complexity 1 27 0 361 220 92 37 chr5 164267701 164267810 -35362340 - L1ME4a LINE L1 -17 6104 5990 521 299 62 5 chr5 164267846 164268040 -35362110 - MIR SINE MIR -17 245 41 195 191 159 0 chr5 164268111 164268174 -35361976 + L3 LINE CR1 1464 1536 -41 207 250 14 14 chr5 164269179 164269251 -35360899 + C-rich Low_complexity Low_complexity 2 73 0 357 258 25 28 chr5 164269956 164270128 -35360022 - MIR SINE MIR -1 261 45 215 338 35 35 chr5 164270340 164270485 -35359665 + L3 LINE CR1 1430 1574 -3 351 155 17 0 chr5 164270592 164270650 -35359500 - L2 LINE L2 -1 3271 3213 192 40 0 0 chr5 164270783 164270808 -35359342 + (CTG)n Simple_repeat Simple_repeat 2 26 0 245 290 153 32 chr5 164270930 164271054 -35359096 - L2 LINE L2 -6 3307 3169 682 190 0 0 chr5 164271069 164271185 -35358965 + FLAM_A SINE Alu 16 131 -11 552 273 48 24 chr5 164271516 164271725 -35358425 - MIR SINE MIR -39 223 10 332 309 109 20 chr5 164271708 164271909 -35358241 - MIR SINE MIR -31 231 13 * 393 292 66 0 chr5 164272451 164272588 -35357562 + MIR3 SINE MIR 52 197 -11 292 311 80 4 chr5 164272607 164272738 -35357412 + MIR SINE MIR 14 155 -63 451 316 26 0 chr5 164272917 164273069 -35357081 - L3 LINE CR1 -74 1503 1348 197 250 0 54 chr5 164274652 164274708 -35355442 - L3 LINE CR1 -182 1395 1343 1922 133 35 3 chr5 164274731 164275046 -35355104 - L1PA16 LINE L1 -16 6150 5826 956 181 13 0 chr5 164275521 164275676 -35354474 + FRAM SINE Alu 1 157 -19 1503 199 53 4 chr5 164275725 164276006 -35354144 + AluJb SINE Alu 1 295 -17 535 173 156 56 chr5 164276222 164276401 -35353749 + L2 LINE L2 3103 3299 -14 1908 153 42 14 chr5 164276411 164276770 -35353380 + L1MB2 LINE L1 5800 6168 -3 294 180 0 0 chr5 164276784 164276845 -35353305 + (TGGA)n Simple_repeat Simple_repeat 1 61 0 294 299 126 8 chr5 164276879 164277006 -35353144 - MIR3 SINE MIR -8 200 59 207 229 0 84 chr5 164277514 164277597 -35352553 + G-rich Low_complexity Low_complexity 1 76 0 2373 89 3 16 chr5 164278672 164278985 -35351165 - AluSc SINE Alu 0 309 1 221 240 152 22 chr5 164278993 164279103 -35351047 - MIR3 SINE MIR -119 143 6 206 179 77 0 chr5 164279520 164279559 -35350591 - L2 LINE L2 -5 3308 3267 2350 86 3 0 chr5 164279687 164279978 -35350172 + AluSp SINE Alu 1 292 -21 311 258 0 54 chr5 164280063 164280156 -35349994 - MIR SINE MIR -91 117 30 242 291 18 36 chr5 164280719 164280829 -35349321 + MER5A DNA MER1_type 2 109 -80 441 220 138 19 chr5 164280897 164281056 -35349094 - MER5B DNA MER1_type 0 178 1 603 304 112 10 chr5 164281057 164281353 -35348797 + L3 LINE CR1 1212 1537 -40 487 261 196 5 chr5 164282167 164282351 -35347799 + MIR SINE MIR 23 241 -21 1926 152 3 25 chr5 164284011 164284327 -35345823 - AluJo SINE Alu -3 309 1 348 228 33 22 chr5 164284382 164284474 -35345676 + MIR SINE MIR 127 219 -43 225 132 0 0 chr5 164284825 164284863 -35345287 + (CAG)n Simple_repeat Simple_repeat 2 39 0 280 338 75 0 chr5 164287391 164287551 -35342599 + MIR SINE MIR 15 186 -76 438 202 18 55 chr5 164287903 164288012 -35342138 + MIR3 SINE MIR 65 169 -39 230 287 202 0 chr5 164288056 164288150 -35342000 + MER103 DNA DNA 4 116 -50 1905 139 4 0 chr5 164288277 164288550 -35341600 + AluSx SINE Alu 1 274 -38 385 335 7 20 chr5 164289100 164289278 -35340872 + MER5A DNA MER1_type 6 176 -2 283 319 89 15 chr5 164289451 164289586 -35340564 - L3 LINE CR1 -496 1081 937 312 305 37 24 chr5 164289753 164289917 -35340233 + L2 LINE L2 2734 2899 -415 205 278 56 111 chr5 164290069 164290195 -35339955 + L2 LINE L2 3179 3297 -16 250 299 11 11 chr5 164290587 164290674 -35339476 - MIR3 SINE MIR -13 195 109 630 211 28 94 chr5 164290881 164291094 -35339056 - MIR SINE MIR -28 234 36 187 185 12 136 chr5 164291797 164291864 -35338286 - MER5B DNA MER1_type 0 178 121 2122 116 3 27 chr5 164291864 164292165 -35337985 + AluSx SINE Alu 1 294 -18 187 185 12 136 chr5 164292165 164292178 -35337972 - MER5B DNA MER1_type -57 121 108 2662 45 0 0 chr5 164292217 164292526 -35337624 - AluY SINE Alu -2 309 1 300 218 218 77 chr5 164292593 164292763 -35337387 - MER112 DNA MER1_type -52 208 15 467 325 64 11 chr5 164292771 164292959 -35337191 - MIR SINE MIR -53 209 12 329 316 22 43 chr5 164292962 164293101 -35337049 + MER5A DNA MER1_type 1 136 -53 191 172 0 0 chr5 164293890 164293919 -35336231 - L2 LINE L2 -25 3247 3219 819 184 10 75 chr5 164294382 164294583 -35335567 + MER5A DNA MER1_type 2 189 0 444 238 193 55 chr5 164295222 164295403 -35334747 + MIR SINE MIR 57 262 0 533 300 97 35 chr5 164295821 164296305 -35333845 - L1M4 LINE L1 -2154 3992 3479 1101 246 97 34 chr5 164296305 164296851 -35333299 + L2 LINE L2 2714 3309 -4 583 263 67 43 chr5 164297487 164297696 -35332454 - MIR SINE MIR -27 235 22 835 180 26 82 chr5 164298379 164298612 -35331538 + AluJo SINE Alu 1 220 -92 226 192 128 0 chr5 164298690 164298768 -35331382 + L1ME4a LINE L1 5736 5823 -298 756 240 133 14 chr5 164299567 164299921 -35330229 + L1ME1 LINE L1 4268 4663 -1483 * 2663 228 46 10 chr5 164299917 164300597 -35329553 + L1ME1 LINE L1 5448 6151 -15 261 219 40 0 chr5 164300926 164301015 -35329135 + L1M3 LINE L1 5624 5713 -408 298 272 42 92 chr5 164301046 164301329 -35328821 + L1ME4a LINE L1 5836 6104 -17 436 255 47 34 chr5 164302494 164302622 -35327528 + MIR3 SINE MIR 1 133 -75 967 198 113 0 chr5 164302622 164302834 -35327316 + MER46A DNA MER2_type 1 236 0 436 255 47 34 chr5 164302834 164302854 -35327296 + MIR3 SINE MIR 133 151 -57 823 242 23 41 chr5 164302926 164303145 -35327005 + MIR SINE MIR 47 261 -1 788 141 0 0 chr5 164303554 164303675 -35326475 + MSTB1 LTR MaLR 1 121 -311 1263 174 9 0 chr5 164303709 164303922 -35326228 + MSTB1 LTR MaLR 218 432 0 366 274 204 0 chr5 164303988 164304101 -35326049 + L2 LINE L2 3137 3272 0 380 306 75 0 chr5 164304118 164304278 -35325872 + L3 LINE CR1 1392 1563 -14 184 222 37 19 chr5 164304966 164305020 -35325130 - L3 LINE CR1 -329 1248 1194 * 231 305 12 37 chr5 164305015 164305097 -35325053 - MIR3 SINE MIR -43 165 86 215 203 29 167 chr5 164305026 164305164 -35324986 + L2 LINE L2 1384 1502 -1812 * 239 294 11 54 chr5 164306226 164306318 -35323832 - MIR3 SINE MIR -34 174 87 229 204 62 133 chr5 164306851 164306964 -35323186 - MER102b DNA MER1_type -4 337 233 398 191 79 11 chr5 164307241 164307330 -35322820 + L2 LINE L2 3219 3313 0 466 310 45 40 chr5 164307469 164307669 -35322481 - MIR3 SINE MIR -5 203 3 896 141 0 7 chr5 164308730 164308865 -35321285 - FLAM_C SINE Alu -9 134 1 483 250 186 5 chr5 164309374 164309578 -35320572 - MER112 DNA MER1_type -12 248 8 473 269 0 0 chr5 164309604 164309708 -35320442 + U13 snRNA snRNA 1 104 0 272 248 151 41 chr5 164309829 164310047 -35320103 + L1ME4a LINE L1 5868 6109 -12 * 298 189 0 17 chr5 164310044 164310116 -35320034 + L1MC4 LINE L1 7534 7602 -206 2006 132 0 23 chr5 164310193 164310497 -35319653 + AluJo SINE Alu 11 307 -5 315 0 0 0 chr5 164310514 164310549 -35319601 + (CA)n Simple_repeat Simple_repeat 2 36 0 330 174 35 70 chr5 164310549 164310635 -35319515 - L1MCa LINE L1 -4349 2077 1995 * 349 322 0 11 chr5 164310558 164310648 -35319502 + L1MC4 LINE L1 6614 6702 -1340 602 131 0 10 chr5 164310658 164310757 -35319393 + MER4A LTR ERV1 1 98 -566 1548 134 25 78 chr5 164310757 164311122 -35319028 + MER4A LTR ERV1 261 664 0 2265 104 0 7 chr5 164311204 164311503 -35318647 + AluSx SINE Alu 1 297 -15 345 227 8 53 chr5 164311617 164311749 -35318401 + L1MC4 LINE L1 7916 8041 -1 454 261 89 49 chr5 164312436 164312639 -35317511 + MIR SINE MIR 3 213 -49 254 309 52 31 chr5 164312720 164312817 -35317333 + L2 LINE L2 3168 3266 -6 2375 60 18 0 chr5 164312927 164313211 -35316939 + AluY SINE Alu 1 289 -22 1807 143 0 18 chr5 164313221 164313501 -35316649 + AluJb SINE Alu 38 312 0 202 216 0 0 chr5 164313560 164313597 -35316553 + (CATA)n Simple_repeat Simple_repeat 2 38 0 354 294 34 40 chr5 164313839 164314038 -35316112 - MIR3 SINE MIR -43 165 17 196 330 165 10 chr5 164314885 164314988 -35315162 - MIR SINE MIR -71 137 19 289 297 72 65 chr5 164315582 164315720 -35314430 + MIR3 SINE MIR 18 156 -52 287 312 48 8 chr5 164315764 164315889 -35314261 - MER20B DNA MER1_type -611 172 43 1356 167 48 80 chr5 164315928 164316239 -35313911 + AluJb SINE Alu 1 301 -11 827 50 78 71 chr5 164316864 164317005 -35313145 + MER30 DNA MER1_type 3 144 -86 534 86 258 0 chr5 164317524 164317617 -35312533 + MER30 DNA MER1_type 114 230 0 213 339 52 9 chr5 164317686 164317801 -35312349 + MIR3 SINE MIR 75 194 -14 1878 134 41 14 chr5 164318020 164318310 -35311840 + AluSx SINE Alu 1 298 -14 674 228 0 16 chr5 164318337 164318460 -35311690 + FLAM_A SINE Alu 5 125 -8 586 289 47 38 chr5 164318887 164319122 -35311028 - MIR SINE MIR -11 251 15 352 98 16 33 chr5 164319960 164320021 -35310129 + AluJ/FLAM SINE Alu 15 74 -228 515 218 35 35 chr5 164320094 164320264 -35309886 + L1ME4a LINE L1 5952 6121 0 240 288 108 0 chr5 164320604 164320715 -35309435 - MIR3 SINE MIR -1 207 85 252 256 61 0 chr5 164320762 164320844 -35309306 - MIR SINE MIR -29 233 147 219 380 50 20 chr5 164320846 164320946 -35309204 - MIR3 SINE MIR -96 112 10 401 277 0 10 chr5 164321499 164321600 -35308550 + MIR SINE MIR 43 142 -66 3138 210 83 38 chr5 164322112 164322695 -35307455 + L1MEc LINE L1 2015 2570 -3645 1908 161 13 0 chr5 164322695 164322994 -35307156 - AluJo SINE Alu -9 303 1 3138 210 83 38 chr5 164322994 164323468 -35306682 + L1MEc LINE L1 2570 3021 -3194 1574 171 18 18 chr5 164323468 164323749 -35306401 + AluJo SINE Alu 1 281 -31 213 39 0 0 chr5 164323752 164323778 -35306372 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 3138 210 83 38 chr5 164323778 164323828 -35306322 + L1MEc LINE L1 3022 3159 -3056 3271 244 104 8 chr5 164325237 164326235 -35303915 + L1MEc LINE L1 3403 4496 -1719 330 286 183 0 chr5 164326245 164326371 -35303779 + MIR3 SINE MIR 12 160 -48 180 351 0 0 chr5 164326527 164326584 -35303566 + MIR3 SINE MIR 151 207 -1 303 295 42 0 chr5 164327000 164327095 -35303055 - MIR SINE MIR -114 148 50 2452 69 3 25 chr5 164327145 164327463 -35302687 + AluSq SINE Alu 1 311 -2 648 233 9 0 chr5 164327971 164328087 -35302063 + FLAM_A SINE Alu 6 122 -20 468 328 0 0 chr5 164329254 164329373 -35300777 + MIR3 SINE MIR 84 202 -6 445 260 30 47 chr5 164329666 164329835 -35300315 - MIR SINE MIR -50 212 47 232 200 238 0 chr5 164330674 164330754 -35299396 - MIR SINE MIR -89 173 75 396 0 0 0 chr5 164330957 164331001 -35299149 + (TG)n Simple_repeat Simple_repeat 1 44 0 1902 152 0 7 chr5 164331001 164331284 -35298866 - AluJb SINE Alu -31 281 1 2409 93 6 0 chr5 164333428 164333739 -35296411 - AluSp SINE Alu 0 313 1 291 276 59 65 chr5 164334316 164334486 -35295664 + MER5A DNA MER1_type 21 189 0 854 142 0 30 chr5 164334887 164335021 -35295129 + AluJo SINE Alu 5 134 -178 23 0 0 0 chr5 164335022 164335045 -35295105 + AT_rich Low_complexity Low_complexity 1 23 0 1477 174 53 33 chr5 164335078 164335382 -35294768 - AluJb SINE Alu -2 310 1 37 0 0 0 chr5 164335439 164335476 -35294674 + AT_rich Low_complexity Low_complexity 1 37 0 894 153 0 0 chr5 164335476 164335594 -35294556 - FLAM_C SINE Alu -15 118 1 889 142 130 0 chr5 164335760 164335888 -35294262 + MER3 DNA MER1_type 1 158 -51 1753 186 0 19 chr5 164335888 164336199 -35293951 - AluJb SINE Alu -7 305 1 889 142 130 0 chr5 164336199 164336239 -35293911 + MER3 DNA MER1_type 158 191 -18 210 95 24 24 chr5 164336951 164336993 -35293157 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 299 296 26 72 chr5 164337394 164337546 -35292604 + MIR SINE MIR 16 160 -102 27 0 0 0 chr5 164338058 164338085 -35292065 + GC_rich Low_complexity Low_complexity 1 27 0 182 217 272 33 chr5 164339036 164339128 -35291022 + L3 LINE CR1 1427 1540 -37 685 252 134 24 chr5 164339174 164339464 -35290686 + L2 LINE L2 2524 2845 -469 245 255 66 85 chr5 164339491 164339597 -35290553 + MIR SINE MIR 5 108 -154 586 218 265 60 chr5 164339622 164340022 -35290128 + L2 LINE L2 2400 2881 -433 259 321 123 0 chr5 164340396 164340502 -35289648 + L2 LINE L2 3136 3254 -18 279 208 0 0 chr5 164340751 164340804 -35289346 + Charlie8 DNA MER1_type 1367 1419 -998 301 245 324 29 chr5 164340967 164341106 -35289044 + L2 LINE L2 2615 2794 -520 1094 110 0 0 chr5 164341109 164341275 -35288875 - AluSc SINE Alu 0 298 133 2458 69 0 7 chr5 164341275 164341579 -35288571 - AluY SINE Alu -9 302 1 1946 114 83 0 chr5 164341688 164341977 -35288173 - AluSq SINE Alu 0 313 1 506 289 107 20 chr5 164342018 164342271 -35287879 + L2 LINE L2 2988 3262 -51 903 221 6 0 chr5 164344694 164344866 -35285284 + MER5B DNA MER1_type 1 173 -5 917 182 80 6 chr5 164344934 164345110 -35285040 - MER5A DNA MER1_type 0 189 1 255 61 0 0 chr5 164345304 164345337 -35284813 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 753 218 99 0 chr5 164345337 164345479 -35284671 - FAM SINE Alu -24 161 6 749 119 110 8 chr5 164345558 164345676 -35284474 + FLAM_C SINE Alu 1 130 -3 202 331 163 0 chr5 164346215 164346375 -35283775 + L2 LINE L2 2570 2755 -559 329 262 119 32 chr5 164346714 164346840 -35283310 + L2 LINE L2 3173 3309 -4 199 238 0 0 chr5 164347174 164347216 -35282934 + L2 LINE L2 3263 3304 -9 1729 124 89 0 chr5 164347251 164347537 -35282613 + AluSx SINE Alu 1 309 0 1991 149 13 10 chr5 164348538 164348846 -35281304 + AluJo SINE Alu 1 309 -3 216 299 103 28 chr5 164350562 164350669 -35279481 - MIR SINE MIR -62 146 32 1842 138 10 10 chr5 164350691 164350981 -35279169 + AluJb SINE Alu 18 307 -5 2293 85 0 3 chr5 164351154 164351447 -35278703 - AluSg1 SINE Alu -17 292 1 2224 124 0 0 chr5 164351459 164351766 -35278384 - AluSx SINE Alu -5 307 1 24 77 0 0 chr5 164353010 164353062 -35277088 + AT_rich Low_complexity Low_complexity 1 52 0 2313 90 0 3 chr5 164354576 164354877 -35275273 - AluSx SINE Alu -12 300 1 1462 180 61 17 chr5 164355378 164355673 -35274477 + AluJo SINE Alu 1 308 -4 214 194 65 11 chr5 164356012 164356105 -35274045 + (TA)n Simple_repeat Simple_repeat 1 98 0 500 299 51 0 chr5 164359053 164359210 -35270940 - MIR3 SINE MIR -2 206 42 243 94 0 0 chr5 164359416 164359448 -35270702 + U2 snRNA snRNA 4 35 -153 562 175 136 0 chr5 164359712 164359851 -35270299 + FLAM_C SINE Alu 1 153 0 1735 160 57 0 chr5 164360238 164360359 -35269791 + AluJb SINE Alu 1 114 -198 274 23 47 0 chr5 164360359 164360402 -35269748 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 1735 160 57 0 chr5 164360402 164360562 -35269588 + AluJb SINE Alu 114 298 -14 181 366 168 20 chr5 164360606 164360707 -35269443 + MIR3 SINE MIR 48 163 -45 348 350 19 25 chr5 164362715 164362875 -35267275 + L2 LINE L2 2932 3090 -182 2359 110 0 0 chr5 164363081 164363380 -35266770 - AluSx SINE Alu -13 299 1 1334 216 29 117 chr5 164363907 164364293 -35265857 + L1MCa LINE L1 1001 1419 -5007 1637 125 4 0 chr5 164364293 164364533 -35265617 + AluSq SINE Alu 63 303 -10 2257 96 0 7 chr5 164364533 164364824 -35265326 + AluSc SINE Alu 1 289 -20 1334 216 29 117 chr5 164364824 164365098 -35265052 + L1MCa LINE L1 1418 1597 -4829 1616 185 0 27 chr5 164365098 164365395 -35264755 - AluJo SINE Alu -23 289 1 1334 216 29 117 chr5 164365395 164365450 -35264700 + L1MCa LINE L1 1597 1655 -4771 1026 185 0 22 chr5 164365457 164365635 -35264515 + AluJb SINE Alu 137 310 -2 331 200 9 9 chr5 164365704 164365814 -35264336 + GA-rich Low_complexity Low_complexity 1 110 0 408 269 107 26 chr5 164365821 164366055 -35264095 + L1MCa LINE L1 1926 2178 -4429 937 117 0 23 chr5 164366090 164366218 -35263932 - FLAM_C SINE Alu -17 126 2 1456 204 82 5 chr5 164366222 164366610 -35263540 + L1MCa LINE L1 2186 2603 -4004 2183 127 13 0 chr5 164367557 164367865 -35262285 + AluSx SINE Alu 1 312 0 192 233 33 17 chr5 164368284 164368344 -35261806 - L2 LINE L2 -1 3312 3252 261 285 42 57 chr5 164368356 164368549 -35261601 + L2 LINE L2 2437 2626 -688 1955 148 0 16 chr5 164368756 164369061 -35261089 - AluJo SINE Alu -12 300 1 403 264 34 32 chr5 164369061 164369316 -35260834 + L2 LINE L2 3016 3311 -2 290 352 63 0 chr5 164369779 164369938 -35260212 - L2 LINE L2 -908 2406 2238 1863 125 0 73 chr5 164370245 164370558 -35259592 + AluSx SINE Alu 1 290 -22 2407 79 0 32 chr5 164370567 164370883 -35259267 + AluY SINE Alu 1 306 -5 2316 85 0 3 chr5 164370895 164371188 -35258962 + AluSg1 SINE Alu 1 292 -17 1858 138 10 10 chr5 164371361 164371651 -35258499 - AluJb SINE Alu -5 307 18 192 233 33 17 chr5 164373882 164373942 -35256208 - L2 LINE L2 -1 3312 3252 282 283 44 62 chr5 164373954 164374180 -35255970 + L2 LINE L2 2437 2658 -656 713 261 42 46 chr5 164374189 164374326 -35255824 + L2 LINE L2 2882 3018 -295 2025 148 0 10 chr5 164374326 164374629 -35255521 - AluJo SINE Alu -12 300 1 713 261 42 46 chr5 164374629 164374774 -35255376 + L2 LINE L2 3018 3163 -150 290 352 63 0 chr5 164375347 164375506 -35254644 - L2 LINE L2 -908 2406 2238 1863 125 0 73 chr5 164375813 164376126 -35254024 + AluSx SINE Alu 1 290 -22 2375 77 0 43 chr5 164376135 164376458 -35253692 + AluY SINE Alu 1 309 -2 1782 163 51 20 chr5 164376473 164376828 -35253322 + L1MB4 LINE L1 5530 5895 -279 325 175 48 0 chr5 164376873 164376936 -35253214 + L1MB4 LINE L1 5879 5944 -230 751 210 0 0 chr5 164376936 164377074 -35253076 + FRAM SINE Alu 1 131 -45 657 184 203 0 chr5 164377119 164377277 -35252873 + L1MB4 LINE L1 5935 6124 -56 567 188 101 62 chr5 164377402 164377610 -35252540 + L1ME1 LINE L1 5946 6161 -5 913 201 6 12 chr5 164377673 164377842 -35252308 - FRAM SINE Alu -11 165 1 1311 134 58 5 chr5 164378086 164378310 -35251840 + MER46A DNA MER2_type 1 236 0 275 296 148 37 chr5 164378575 164378651 -35251499 - MIR3 SINE MIR -8 200 134 1969 164 3 3 chr5 164378651 164378961 -35251189 + AluSx SINE Alu 1 310 -2 275 296 148 37 chr5 164378961 164379046 -35251104 - MIR3 SINE MIR -74 134 21 40 0 0 0 chr5 164379264 164379304 -35250846 + AT_rich Low_complexity Low_complexity 1 40 0 2481 70 3 3 chr5 164379354 164379656 -35250494 - AluSc SINE Alu -7 302 1 234 298 58 54 chr5 164379732 164379937 -35250213 - L1MC4 LINE L1 -3 8039 7834 503 202 19 0 chr5 164379945 164380049 -35250101 - L1MD3 LINE L1 -2 7993 7888 2508 72 0 7 chr5 164380056 164380361 -35249789 - AluY SINE Alu -8 303 1 1786 133 59 4 chr5 164380362 164380633 -35249517 - AluJb SINE Alu -12 300 15 889 149 0 8 chr5 164380974 164381108 -35249042 + FLAM_C SINE Alu 1 133 0 2161 96 0 20 chr5 164381142 164381280 -35248870 + AluSq SINE Alu 1 140 -187 2366 97 0 0 chr5 164381280 164381580 -35248570 + AluSc SINE Alu 1 300 -9 2161 96 0 20 chr5 164381580 164381774 -35248376 + AluSq SINE Alu 140 327 0 495 225 202 0 chr5 164381836 164382009 -35248141 + L2 LINE L2 3102 3309 -4 1893 166 0 3 chr5 164382218 164382514 -35247636 + AluJb SINE Alu 1 295 -17 202 260 20 0 chr5 164382703 164382753 -35247397 - MER5A DNA MER1_type -138 51 1 351 295 119 29 chr5 164382760 164382970 -35247180 + MIR SINE MIR 32 260 -2 279 307 0 18 chr5 164383261 164383375 -35246775 + MIR SINE MIR 33 144 -64 868 151 0 22 chr5 164384587 164384726 -35245424 + AluJo SINE Alu 1 136 -176 259 308 86 37 chr5 164385303 164385476 -35244674 + MIR SINE MIR 28 212 -50 726 262 48 16 chr5 164385508 164385756 -35244394 - MIR SINE MIR -6 256 1 1563 155 0 4 chr5 164385917 164386169 -35243981 + AluJb SINE Alu 62 312 0 206 304 58 0 chr5 164386234 164386303 -35243847 - MIR SINE MIR -124 138 66 1872 136 3 56 chr5 164387063 164387387 -35242763 - AluJo SINE Alu -3 309 3 303 252 122 24 chr5 164387594 164387616 -35242534 - MER5B DNA MER1_type 0 178 160 1765 104 0 4 chr5 164387616 164387846 -35242304 + AluSq SINE Alu 68 296 -17 303 252 122 24 chr5 164387846 164387946 -35242204 - MER5B DNA MER1_type -18 160 44 1538 178 40 66 chr5 164387947 164388173 -35241977 + L1PA16 LINE L1 5800 6014 -152 2379 96 3 0 chr5 164388173 164388474 -35241676 + AluSq SINE Alu 1 302 -11 1538 178 40 66 chr5 164388474 164388624 -35241526 + L1PA16 LINE L1 6014 6166 0 1997 157 6 6 chr5 164388652 164388964 -35241186 - AluJo SINE Alu 0 312 1 266 213 111 46 chr5 164389022 164389130 -35241020 - L1MC4a LINE L1 -1867 5941 5827 752 257 139 72 chr5 164389138 164389536 -35240614 - MLT1G LTR MaLR -11 579 172 1639 191 7 10 chr5 164389536 164389834 -35240316 + AluJo SINE Alu 6 302 -10 752 257 139 72 chr5 164389834 164389982 -35240168 - MLT1G LTR MaLR -418 172 35 463 197 68 26 chr5 164389989 164390106 -35240044 - L1MC4a LINE L1 -1998 5810 5689 2578 34 3 7 chr5 164390224 164390522 -35239628 - AluY SINE Alu -14 297 1 186 118 0 0 chr5 164391061 164391095 -35239055 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 277 286 131 11 chr5 164391430 164391605 -35238545 + L1ME LINE L1 5652 5847 -274 2211 114 13 0 chr5 164391621 164391927 -35238223 - AluSq SINE Alu -3 310 1 2295 92 0 0 chr5 164392130 164392422 -35237728 + AluSc SINE Alu 2 293 -16 21 57 0 0 chr5 164392433 164392468 -35237682 + AT_rich Low_complexity Low_complexity 1 35 0 314 345 41 7 chr5 164392580 164392725 -35237425 - MIR SINE MIR -79 183 34 653 206 15 37 chr5 164392756 164392892 -35237258 - FLAM_A SINE Alu 0 133 1 193 287 69 11 chr5 164393590 164393677 -35236473 + L2 LINE L2 2543 2634 -680 249 277 15 0 chr5 164393741 164393806 -35236344 - L3 LINE CR1 -112 1465 1400 345 211 53 0 chr5 164393842 164393918 -35236232 - MER116 DNA Mariner 0 80 1 350 239 239 6 chr5 164393948 164394115 -35236035 - MIR SINE MIR -56 206 1 2262 119 0 0 chr5 164394497 164394809 -35235341 - AluSx SINE Alu 0 312 1 2280 128 46 120 chr5 164394836 164395353 -35234797 + L1MB7 LINE L1 5620 6098 -86 899 195 27 0 chr5 164395901 164396050 -35234100 - FRAM SINE Alu -24 152 1 581 230 135 68 chr5 164396503 164396685 -35233465 + L1ME4a LINE L1 5550 5755 -366 926 169 169 0 chr5 164396685 164396869 -35233281 + MER20 DNA MER1_type 2 216 -3 581 230 135 68 chr5 164396869 164396938 -35233212 + L1ME4a LINE L1 5755 5818 -303 1874 169 7 3 chr5 164396949 164397251 -35232899 + AluJb SINE Alu 1 303 -9 368 253 33 0 chr5 164397279 164397370 -35232780 + 5S rRNA rRNA 1 94 -27 376 146 0 0 chr5 164397372 164397427 -35232723 - FLAM_A SINE Alu -45 88 34 3872 168 61 10 chr5 164397453 164398142 -35232008 - MER21B LTR ERV1 -139 724 1 396 265 71 59 chr5 164398143 164398396 -35231754 - L2 LINE L2 -22 3291 3036 2146 125 6 3 chr5 164398851 164399162 -35230988 - AluSx SINE Alu 0 312 1 353 209 130 9 chr5 164399321 164399436 -35230714 + L1ME4a LINE L1 5991 6119 -2 634 188 138 17 chr5 164400806 164400987 -35229163 - L1MC4 LINE L1 0 8042 7840 288 100 60 0 chr5 164400999 164401049 -35229101 + L1MC4 LINE L1 7783 7835 -207 348 194 46 28 chr5 164401131 164401239 -35228911 - L1MC4 LINE L1 -189 7853 7744 805 219 0 7 chr5 164401239 164401394 -35228756 + AluJo SINE Alu 2 155 -157 4935 157 28 51 chr5 164401394 164402386 -35227764 + LTR5 LTR ERVK 1 969 0 1199 135 6 0 chr5 164402400 164402570 -35227580 + 7SLRNA srpRNA srpRNA 122 292 -28 1814 182 7 3 chr5 164402596 164402904 -35227246 + AluJo SINE Alu 1 309 -3 1294 213 27 23 chr5 164403068 164403369 -35226781 - L1MC4 LINE L1 -411 7631 7330 201 205 0 0 chr5 164403413 164403452 -35226698 + MIR SINE MIR 89 127 -81 219 242 95 63 chr5 164403463 164403558 -35226592 + L2 LINE L2 2962 3059 -213 374 257 9 19 chr5 164403592 164403697 -35226453 + L2 LINE L2 3158 3261 -11 260 300 20 30 chr5 164403922 164404022 -35226128 - MIR3 SINE MIR -15 193 95 2265 99 7 0 chr5 164404061 164404353 -35225797 + AluSq SINE Alu 1 294 -19 452 262 40 0 chr5 164404600 164404726 -35225424 - MIR SINE MIR -69 193 63 704 121 0 0 chr5 164404727 164404826 -35225324 + HY3 scRNA scRNA 1 99 -2 182 224 35 69 chr5 164404854 164404912 -35225238 - MIR SINE MIR -187 75 20 466 303 86 9 chr5 164405055 164405276 -35224874 + MIR SINE MIR 5 242 -20 787 188 0 0 chr5 164406069 164406223 -35223927 - MER53 DNA DNA 0 189 36 303 292 22 0 chr5 164406314 164406403 -35223747 + L2 LINE L2 3182 3272 0 217 130 152 0 chr5 164406833 164406879 -35223271 + L2 LINE L2 3261 3313 0 211 214 0 0 chr5 164406884 164406926 -35223224 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 213 339 54 0 chr5 164406957 164407069 -35223081 + MIR SINE MIR 132 249 -13 1787 170 7 0 chr5 164407183 164407472 -35222678 + AluJb SINE Alu 1 291 -21 654 327 91 14 chr5 164407486 164407997 -35222153 + L2 LINE L2 2766 3313 0 321 93 0 0 chr5 164408049 164408092 -35222058 + MADE1 DNA Mariner 2 44 -36 209 298 0 0 chr5 164408094 164408151 -35221999 + L3 LINE CR1 1520 1576 -1 414 0 0 0 chr5 164408654 164408700 -35221450 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 1904 163 0 7 chr5 164408700 164408989 -35221161 - AluJo SINE Alu -25 287 1 243 297 27 0 chr5 164409343 164409417 -35220733 + L2 LINE L2 3231 3306 -7 261 57 0 0 chr5 164409569 164409604 -35220546 + (CA)n Simple_repeat Simple_repeat 2 36 0 338 298 16 8 chr5 164409629 164409750 -35220400 + MIR SINE MIR 104 225 -37 183 292 0 0 chr5 164409819 164409867 -35220283 + L2 LINE L2 3014 3061 -252 223 208 38 0 chr5 164410377 164410430 -35219720 + MIR3 SINE MIR 117 171 -37 463 238 48 36 chr5 164410434 164410602 -35219548 + MIR SINE MIR 2 171 -91 730 293 33 0 chr5 164411085 164411297 -35218853 + MIR SINE MIR 4 222 -40 228 268 0 0 chr5 164411376 164411432 -35218718 + MIR SINE MIR 95 150 -112 903 127 0 0 chr5 164411434 164411552 -35218598 + FLAM_C SINE Alu 1 118 -25 28 0 0 0 chr5 164411552 164411580 -35218570 + AT_rich Low_complexity Low_complexity 1 28 0 1474 195 89 0 chr5 164411591 164411873 -35218277 + AluJo SINE Alu 1 307 -5 24 67 0 0 chr5 164413493 164413538 -35216612 + AT_rich Low_complexity Low_complexity 1 45 0 229 325 52 0 chr5 164414629 164414706 -35215444 - MER5A DNA MER1_type 0 189 109 834 162 7 0 chr5 164414797 164414939 -35215211 + FLAM_C SINE Alu 1 143 0 2250 250 80 34 chr5 164414940 164415214 -35214936 - L1ME3A LINE L1 -16 6137 5877 2337 48 0 4 chr5 164415214 164415517 -35214633 - AluY SINE Alu 0 319 18 2250 250 80 34 chr5 164415517 164416130 -35214020 - L1ME3A LINE L1 -276 5877 5208 3833 94 26 111 chr5 164416130 164416323 -35213827 + Tigger3b DNA MER2_type 1 209 -2820 2611 64 0 13 chr5 164416323 164416638 -35213512 + AluSg SINE Alu 1 311 0 279 0 0 0 chr5 164416638 164416669 -35213481 + (TA)n Simple_repeat Simple_repeat 2 32 0 3833 94 26 111 chr5 164416669 164417275 -35212875 + Tigger3b DNA MER2_type 207 732 -500 638 186 0 25 chr5 164417284 164417402 -35212748 + AluJo SINE Alu 122 236 -76 1904 129 28 17 chr5 164417425 164417842 -35212308 + Tigger3b DNA MER2_type 703 1232 0 2407 93 7 0 chr5 164417880 164418181 -35211969 - AluSq SINE Alu -10 303 1 1191 258 17 82 chr5 164418186 164418612 -35211538 - L1ME3A LINE L1 -947 5182 4797 2024 147 0 16 chr5 164418612 164418919 -35211231 - AluSx SINE Alu -10 302 1 1191 258 17 82 chr5 164418919 164419031 -35211119 - L1ME3A LINE L1 -1332 4797 4679 246 289 85 44 chr5 164419032 164419154 -35210996 - L1ME3A LINE L1 -5000 1119 1003 2098 134 7 0 chr5 164419154 164419453 -35210697 - AluSx SINE Alu -11 301 1 246 289 85 44 chr5 164419453 164419648 -35210502 - L1ME3A LINE L1 -5116 1003 789 233 224 0 0 chr5 164420335 164420384 -35209766 - L1ME LINE L1 -372 5792 5744 262 253 0 0 chr5 164420390 164420481 -35209669 + (TA)n Simple_repeat Simple_repeat 1 91 0 459 0 0 0 chr5 164421300 164421351 -35208799 + (TTATG)n Simple_repeat Simple_repeat 2 52 0 2135 119 0 0 chr5 164421354 164421639 -35208511 - AluSx SINE Alu -27 285 1 886 263 94 55 chr5 164421648 164422009 -35208141 - MER57A LTR ERV1 -15 388 14 2204 106 0 0 chr5 164422243 164422525 -35207625 + AluSx SINE Alu 1 282 -30 270 0 0 0 chr5 164422528 164422558 -35207592 + (TAA)n Simple_repeat Simple_repeat 2 31 0 534 283 64 11 chr5 164422609 164422851 -35207299 - L1MC4a LINE L1 -317 5804 5637 431 107 13 0 chr5 164423488 164423563 -35206587 + (TTCC)n Simple_repeat Simple_repeat 2 77 0 276 313 70 39 chr5 164423585 164423713 -35206437 - MIR SINE MIR -48 214 83 544 159 0 11 chr5 164423846 164424073 -35206077 - FLAM_C SINE Alu 0 254 29 732 260 7 90 chr5 164424073 164424262 -35205888 + MER102a DNA MER1_type 77 237 -1180 2350 92 3 0 chr5 164424262 164424555 -35205595 - AluSq SINE Alu -19 294 1 732 260 7 90 chr5 164424555 164424642 -35205508 + MER102a DNA MER1_type 237 330 0 915 143 0 0 chr5 164424675 164424808 -35205342 - FLAM_C SINE Alu 0 133 1 2170 116 3 3 chr5 164425335 164425629 -35204521 - AluSq SINE Alu -19 294 1 1693 174 0 37 chr5 164425932 164426231 -35203919 + AluJb SINE Alu 2 289 -23 26 50 0 0 chr5 164426232 164426272 -35203878 + AT_rich Low_complexity Low_complexity 1 40 0 180 188 0 0 chr5 164427060 164427092 -35203058 - MIR SINE MIR -66 142 111 254 307 0 0 chr5 164427172 164427247 -35202903 - L3 LINE CR1 -98 1479 1405 182 234 0 0 chr5 164427444 164427491 -35202659 - MER5A DNA MER1_type -79 110 64 249 136 0 91 chr5 164427506 164427572 -35202578 - MER5C DNA MER1_type -2 322 263 405 86 35 0 chr5 164427584 164427642 -35202508 - MER41E LTR ERV1 -139 373 314 414 83 0 83 chr5 164427734 164427806 -35202344 + Alu SINE Alu 231 296 -13 533 235 40 7 chr5 164427815 164427964 -35202186 - MER5C DNA MER1_type -170 154 1 307 295 116 9 chr5 164428023 164428135 -35202015 + MIR SINE MIR 19 142 -66 885 127 32 19 chr5 164428558 164428715 -35201435 - MER65C LTR ERV1 0 461 303 971 189 0 0 chr5 164428717 164428881 -35201269 + FRAM SINE Alu 1 164 -12 1673 194 10 10 chr5 164428881 164429185 -35200965 - MER65C LTR ERV1 -157 304 1 229 59 0 0 chr5 164429395 164429429 -35200721 + L1MA4 LINE L1 6261 6294 -6 1868 120 94 0 chr5 164429545 164429821 -35200329 + AluSg SINE Alu 1 302 -8 1980 172 54 70 chr5 164429923 164430441 -35199709 - LTR54 LTR ERV1 0 510 1 2245 125 0 0 chr5 164431450 164431754 -35198396 - AluSx SINE Alu -8 304 1 916 267 36 53 chr5 164432057 164432473 -35197677 - MLT1I LTR MaLR 0 409 1 993 152 0 0 chr5 164432591 164432736 -35197414 + FAM SINE Alu 20 164 -21 23 54 0 0 chr5 164432814 164432851 -35197299 + AT_rich Low_complexity Low_complexity 1 37 0 1069 168 0 88 chr5 164432897 164433123 -35197027 - AluJo SINE Alu -92 220 15 22 0 0 0 chr5 164433136 164433158 -35196992 + AT_rich Low_complexity Low_complexity 1 22 0 726 210 116 64 chr5 164433221 164433349 -35196801 + HsTC2 DNA Tc2 6 126 -1772 1934 170 76 90 chr5 164433349 164433674 -35196476 - LTR54 LTR ERV1 -1 509 192 2197 128 0 3 chr5 164433674 164433986 -35196164 + AluJb SINE Alu 2 312 0 1934 170 76 90 chr5 164433986 164434172 -35195978 - LTR54 LTR ERV1 -318 192 5 726 210 116 64 chr5 164434172 164434310 -35195840 + HsTC2 DNA Tc2 126 286 -1612 401 199 23 30 chr5 164434336 164434467 -35195683 + HsTC2 DNA Tc2 1707 1836 -62 860 230 111 43 chr5 164434516 164434938 -35195212 + L1ME3A LINE L1 2210 2660 -3486 564 242 22 101 chr5 164434943 164435220 -35194930 + L1ME3A LINE L1 2816 3070 -3076 408 269 102 30 chr5 164435222 164435389 -35194761 - LTR33 LTR ERVL -2 519 341 1092 176 21 11 chr5 164435502 164435690 -35194460 + AluJb SINE Alu 108 297 -15 746 236 0 0 chr5 164435694 164435834 -35194316 + FLAM_A SINE Alu 1 140 -2 623 233 0 0 chr5 164435982 164436111 -35194039 - FLAM_A SINE Alu -6 136 8 1196 303 49 14 chr5 164436161 164436697 -35193453 + L1ME3A LINE L1 5272 5836 -334 2272 122 0 0 chr5 164437783 164438094 -35192056 + AluSx SINE Alu 1 311 -1 1936 151 21 0 chr5 164438316 164438607 -35191543 - AluSx SINE Alu -11 301 5 2147 139 0 0 chr5 164438697 164439007 -35191143 + AluJo SINE Alu 1 310 -2 271 336 118 33 chr5 164439250 164439880 -35190270 - L2 LINE L2 -778 2536 1854 602 257 53 16 chr5 164440212 164440399 -35189751 - MER91A DNA MER1_type 0 196 3 1598 121 0 0 chr5 164440592 164440807 -35189343 - AluSg/x SINE Alu -14 296 82 199 250 18 54 chr5 164441353 164441409 -35188741 + MIR3 SINE MIR 139 192 -16 274 198 81 0 chr5 164441464 164441575 -35188575 + (TATAA)n Simple_repeat Simple_repeat 5 124 0 1080 165 6 0 chr5 164441676 164441852 -35188298 - FRAM SINE Alu 0 176 1 2348 84 0 7 chr5 164442020 164442316 -35187834 - AluY SINE Alu -17 294 1 203 368 66 20 chr5 164442408 164442560 -35187590 - L2 LINE L2 -68 3204 3046 259 243 0 56 chr5 164442658 164442765 -35187385 - L2 LINE L2 -444 2870 2770 2279 110 3 0 chr5 164443299 164443608 -35186542 - AluSp SINE Alu -3 310 1 2250 124 0 0 chr5 164443639 164443937 -35186213 + AluSx SINE Alu 1 298 -14 180 358 42 21 chr5 164443937 164444032 -35186118 + L2 LINE L2 2706 2802 -512 252 283 200 44 chr5 164444244 164444449 -35185701 + L2 LINE L2 3027 3263 -9 267 31 0 0 chr5 164444456 164444488 -35185662 + (TA)n Simple_repeat Simple_repeat 2 33 0 2046 129 0 27 chr5 164444488 164444783 -35185367 - AluSx SINE Alu -25 287 1 227 305 13 2 chr5 164444838 164444931 -35185219 - MIR SINE MIR -65 143 58 1842 186 0 10 chr5 164445688 164445994 -35184156 + AluJb SINE Alu 1 303 -9 533 183 21 0 chr5 164445999 164446092 -35184058 - L1MC1 LINE L1 -6 6327 6233 239 304 0 59 chr5 164446171 164446273 -35183877 - MIR SINE MIR -57 205 110 184 258 0 30 chr5 164446571 164446637 -35183513 + L2 LINE L2 3201 3264 -49 207 69 0 0 chr5 164446660 164446689 -35183461 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 1803 144 23 27 chr5 164446972 164447271 -35182879 + AluJo SINE Alu 5 302 -10 438 236 24 16 chr5 164447528 164447655 -35182495 - MIR3 SINE MIR -53 155 28 551 207 63 127 chr5 164447689 164447926 -35182224 - MIR SINE MIR -13 249 28 257 276 13 13 chr5 164448780 164448856 -35181294 + MER103 DNA DNA 2 77 -89 429 152 157 168 chr5 164448967 164449077 -35181073 + MER5A DNA MER1_type 1 110 -79 228 35 0 0 chr5 164449077 164449106 -35181044 + (CA)n Simple_repeat Simple_repeat 1 29 0 429 152 157 168 chr5 164449106 164449186 -35180964 + MER5A DNA MER1_type 110 189 0 2374 61 4 0 chr5 164449945 164450225 -35179925 + AluSg1 SINE Alu 20 300 -9 1349 250 50 69 chr5 164451427 164451960 -35178190 - MER31-int LTR ERV1 -1370 6167 4735 1796 163 40 3 chr5 164452074 164452375 -35177775 + AluJb SINE Alu 1 312 0 417 115 103 0 chr5 164452383 164452470 -35177680 - MER31-int LTR ERV1 -1913 3023 2928 1401 205 14 34 chr5 164452519 164452812 -35177338 - AluJo SINE Alu -13 299 13 2951 206 66 98 chr5 164452852 164453032 -35177118 - MER31-int LTR ERV1 -1717 5820 5636 1849 188 0 3 chr5 164453032 164453336 -35176814 - AluJb SINE Alu -9 303 1 2951 206 66 98 chr5 164453336 164453374 -35176776 - MER31-int LTR ERV1 -1901 5636 5598 2260 105 0 0 chr5 164453374 164453668 -35176482 - AluSx SINE Alu -18 294 1 2951 206 66 98 chr5 164453668 164454599 -35175551 - MER31-int LTR ERV1 -1939 5598 4705 2151 130 7 10 chr5 164454599 164454898 -35175252 + AluSx SINE Alu 1 298 -14 2951 206 66 98 chr5 164454898 164454920 -35175230 - MER31-int LTR ERV1 -2832 4705 4684 2193 124 0 3 chr5 164454933 164455232 -35174918 - AluSx SINE Alu -14 298 1 1065 157 0 0 chr5 164455246 164455438 -35174712 + FRAM SINE Alu 1 189 0 706 232 66 43 chr5 164455438 164455742 -35174408 - MER31-int LTR ERV1 -2208 4390 2398 2781 35 3 0 chr5 164455763 164456073 -35174077 - AluY SINE Alu 0 311 1 436 237 66 59 chr5 164456073 164456617 -35173533 - MER31-int LTR ERV1 -2580 2356 1544 247 139 0 0 chr5 164456685 164456721 -35173429 - MER34 LTR ERV1 0 542 507 1450 193 24 27 chr5 164456724 164456849 -35173301 - AluJo SINE Alu -17 295 171 3331 89 20 0 chr5 164456849 164456886 -35173264 - LTR46 LTR ERV1 0 460 425 207 0 0 0 chr5 164456886 164456909 -35173241 + (CA)n Simple_repeat Simple_repeat 2 24 0 3331 89 20 0 chr5 164456909 164457322 -35172828 - LTR46 LTR ERV1 -35 425 1 1450 193 24 27 chr5 164457322 164457492 -35172658 - AluJo SINE Alu -141 171 1 596 224 38 36 chr5 164457492 164457740 -35172410 - L1MB4 LINE L1 -209 5971 5665 251 109 130 0 chr5 164458184 164458230 -35171920 + HERVKC4 LTR ERVK 677 728 -4534 306 177 89 0 chr5 164458707 164458786 -35171364 + L1MCa LINE L1 1979 2064 -4362 * 320 311 0 0 chr5 164458757 164458847 -35171303 - L1MC4 LINE L1 -1339 6703 6614 273 219 0 62 chr5 164458867 164458963 -35171187 - L1MC4 LINE L1 -1339 6703 6614 1832 153 38 0 chr5 164458964 164459252 -35170898 - AluJo SINE Alu -12 300 2 422 278 111 28 chr5 164459294 164459510 -35170640 - MIR SINE MIR -13 249 16 2233 123 0 0 chr5 164460079 164460388 -35169762 - AluSx SINE Alu -3 309 1 1836 157 14 0 chr5 164461069 164461392 -35168758 - AluJb SINE Alu 0 327 1 4277 143 15 26 chr5 164461410 164462077 -35168073 - L1PA16 LINE L1 -9 6157 5497 1873 130 0 14 chr5 164462077 164462354 -35167796 - AluSx SINE Alu -6 306 34 4277 143 15 26 chr5 164462354 164462429 -35167721 - L1PA16 LINE L1 -669 5497 5423 2169 83 28 14 chr5 164462447 164462735 -35167415 - AluSg SINE Alu -18 292 1 252 260 155 0 chr5 164463209 164463303 -35166847 + L1MC/D LINE L1 4903 5009 -1137 3392 20 0 10 chr5 164463348 164463743 -35166407 + L1PA2 LINE L1 5765 6155 0 2114 135 0 6 chr5 164463792 164464132 -35166018 + AluSx SINE Alu 1 312 0 1312 285 88 18 chr5 164464132 164464816 -35165334 + L1MC/D LINE L1 5097 5823 -753 601 264 165 25 chr5 164464914 164465180 -35164970 + Charlie2b DNA MER1_type 7 327 -2535 1016 223 82 5 chr5 164465180 164465400 -35164750 + MER8 DNA MER2_type 1 237 -2 601 264 165 25 chr5 164465400 164465455 -35164695 + Charlie2b DNA MER1_type 327 373 -2489 2080 113 4 0 chr5 164465455 164465730 -35164420 + AluSx SINE Alu 1 276 -36 847 154 0 37 chr5 164465730 164465866 -35164284 - AluJo/FLAM SINE Alu -179 133 3 325 283 179 0 chr5 164465964 164466109 -35164041 + Charlie2b DNA MER1_type 479 649 -2133 455 52 62 10 chr5 164466195 164466292 -35163858 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 1426 149 8 16 chr5 164466398 164466640 -35163510 + AluSx SINE Alu 41 280 -32 815 155 97 32 chr5 164466658 164466813 -35163337 + FRAM SINE Alu 2 166 0 1246 180 140 117 chr5 164466817 164467376 -35162774 + Charlie2 DNA MER1_type 2136 2716 -146 1762 167 7 10 chr5 164467376 164467676 -35162474 + AluJo SINE Alu 1 299 -13 1246 180 140 117 chr5 164467676 164467823 -35162327 + Charlie2 DNA MER1_type 2716 2858 -4 721 183 144 17 chr5 164467830 164468010 -35162140 - MER20 DNA MER1_type 0 219 17 566 314 26 0 chr5 164468104 164468260 -35161890 + MIR SINE MIR 28 187 -75 2793 199 102 29 chr5 164468323 164469041 -35161109 + MER21B LTR ERV1 12 781 -82 1089 145 0 0 chr5 164469129 164469281 -35160869 - AluJb SINE Alu -1 311 160 1118 250 13 33 chr5 164469449 164469532 -35160618 + MER58B DNA MER1_type 48 131 -2289 2258 127 0 0 chr5 164469532 164469831 -35160319 + AluSx SINE Alu 1 299 -13 1118 250 13 33 chr5 164469831 164469907 -35160243 + MER58B DNA MER1_type 131 207 -2213 903 192 79 49 chr5 164469907 164470173 -35159977 + ORSL DNA AcHobo 2 275 0 1118 250 13 33 chr5 164470173 164470312 -35159838 + MER58B DNA MER1_type 207 341 0 312 294 11 0 chr5 164470320 164470412 -35159738 - MIR SINE MIR -67 141 49 246 279 13 0 chr5 164470830 164470909 -35159241 + MER116 DNA Mariner 1 80 0 333 256 60 34 chr5 164470918 164471035 -35159115 - MIR SINE MIR -63 145 26 652 296 121 29 chr5 164471191 164471758 -35158392 + L2 LINE L2 2459 3078 -194 599 252 7 0 chr5 164471959 164472098 -35158052 - MLT1A2 LTR MaLR -230 144 5 334 315 207 14 chr5 164472183 164472405 -35157745 - HAL1 LINE L1 -1208 1299 1035 1623 177 0 0 chr5 164472908 164473156 -35156994 - AluJo SINE Alu -64 248 1 2351 103 0 0 chr5 164473814 164474115 -35156035 - AluSx SINE Alu -11 301 1 754 179 106 72 chr5 164474326 164474533 -35155617 + MER106A DNA MER1_type 22 235 -1 250 314 12 12 chr5 164474569 164474655 -35155495 + MIR SINE MIR 173 258 -4 * 441 330 77 5 chr5 164474644 164474853 -35155297 - MIR SINE MIR -11 251 28 642 245 0 26 chr5 164475558 164475713 -35154437 + MER5A DNA MER1_type 1 151 -38 1221 242 70 62 chr5 164476204 164476860 -35153290 - L1MC5 LINE L1 -30 7931 7271 207 315 31 0 chr5 164477443 164477553 -35152597 - MIR SINE MIR -65 143 42 1090 183 6 0 chr5 164477727 164477902 -35152248 - AluJb SINE Alu -3 309 134 2308 119 0 0 chr5 164477903 164478205 -35151945 - AluSx SINE Alu -10 302 1 416 219 166 15 chr5 164478250 164478404 -35151746 - MIR SINE MIR -42 220 40 232 266 30 75 chr5 164478440 164478579 -35151571 + MIR SINE MIR 77 207 -55 2186 101 3 14 chr5 164478631 164478919 -35151231 + AluSx SINE Alu 11 295 -17 549 304 114 20 chr5 164478940 164479239 -35150911 - L2 LINE L2 -5 3267 2941 1993 159 7 0 chr5 164479239 164479540 -35150610 + AluJo SINE Alu 1 303 -9 187 311 98 0 chr5 164479606 164479738 -35150412 - L2 LINE L2 -457 2857 2713 2263 115 3 0 chr5 164480380 164480684 -35149466 - AluSx SINE Alu -5 307 3 509 312 193 8 chr5 164480686 164481048 -35149102 - L3 LINE CR1 -23 1554 1126 524 268 89 6 chr5 164481148 164481316 -35148834 + MER91B DNA MER1_type 2 183 -7 1983 157 3 3 chr5 164481496 164481795 -35148355 - AluJo SINE Alu -13 299 1 533 280 0 78 chr5 164481825 164482018 -35148132 + Charlie8 DNA MER1_type 152 329 -2088 1560 71 44 22 chr5 164482400 164482625 -35147525 + MER30 DNA MER1_type 1 230 0 490 215 58 131 chr5 164482777 164482971 -35147179 - L1MC5 LINE L1 -26 7935 7765 1736 177 45 0 chr5 164482971 164483259 -35146891 + AluJb SINE Alu 1 301 -11 490 215 58 131 chr5 164483259 164483338 -35146812 - L1MC5 LINE L1 -196 7765 7682 1186 249 25 0 chr5 164483497 164483778 -35146372 + LTR16A LTR ERVL 158 445 -5 2685 65 0 0 chr5 164484038 164484346 -35145804 + AluSq SINE Alu 1 308 -5 1689 179 10 23 chr5 164484362 164484670 -35145480 - AluJo SINE Alu -8 304 1 817 100 46 0 chr5 164484898 164485028 -35145122 - L1MA9 LINE L1 -5 6307 6172 303 275 152 6 chr5 164485031 164485209 -35144941 - L1MC5 LINE L1 -427 7534 7331 239 250 13 26 chr5 164485310 164485386 -35144764 - MIR3 SINE MIR -46 162 88 203 326 29 58 chr5 164485730 164485868 -35144282 + MIR SINE MIR 59 192 -70 596 298 93 15 chr5 164485884 164486089 -35144061 - MIR SINE MIR -1 261 41 2340 93 3 7 chr5 164486090 164486391 -35143759 + AluSq SINE Alu 1 300 -13 291 319 85 0 chr5 164486485 164486626 -35143524 - MIR3 SINE MIR -11 197 45 2268 93 17 0 chr5 164487028 164487328 -35142822 - AluSx SINE Alu -7 305 1 21 0 0 0 chr5 164487821 164487842 -35142308 + AT_rich Low_complexity Low_complexity 1 21 0 544 135 10 10 chr5 164487842 164487938 -35142212 - FLAM_A SINE Alu -5 137 42 273 29 0 0 chr5 164488755 164488789 -35141361 + (CA)n Simple_repeat Simple_repeat 1 34 0 209 211 18 0 chr5 164488811 164488868 -35141282 + (CA)n Simple_repeat Simple_repeat 1 58 0 311 247 41 0 chr5 164490817 164490890 -35139260 - MIR3 SINE MIR -21 187 112 282 291 108 27 chr5 164492972 164493120 -35137030 - MIR3 SINE MIR -29 179 20 234 192 0 19 chr5 164493187 164493239 -35136911 - L2 LINE L2 -1 3312 3262 574 231 39 13 chr5 164493556 164493712 -35136438 + MER117 DNA MER1_type 34 193 -4 230 278 0 0 chr5 164493757 164493811 -35136339 - MIR3 SINE MIR -53 155 102 204 374 54 7 chr5 164495845 164495992 -35134158 + MIR3 SINE MIR 49 202 -6 2305 96 0 3 chr5 164496065 164496358 -35133792 - AluSc SINE Alu -17 292 1 2256 134 0 0 chr5 164496506 164496811 -35133339 - AluJb SINE Alu -7 305 1 642 257 88 0 chr5 164497619 164497790 -35132360 - MIR SINE MIR -60 202 17 387 311 66 20 chr5 164498089 164498285 -35131865 + MLT1K LTR MaLR 187 391 -197 2078 116 41 7 chr5 164498501 164498793 -35131357 - AluSx SINE Alu -8 304 3 3747 175 14 3 chr5 164499008 164499718 -35130432 - L1MB2 LINE L1 -12 6159 5442 2051 128 0 0 chr5 164500004 164500277 -35129873 - AluSx SINE Alu -39 273 1 194 263 35 0 chr5 164500405 164500462 -35129688 + MIR SINE MIR 25 83 -179 414 279 108 54 chr5 164501856 164502189 -35127961 + L2 LINE L2 2942 3292 -21 326 278 42 21 chr5 164502578 164502722 -35127428 - MIR3 SINE MIR -25 183 37 229 251 58 82 chr5 164503429 164503578 -35126572 - MIR SINE MIR -50 212 68 702 292 74 4 chr5 164503783 164504026 -35126124 + MIR SINE MIR 3 262 0 327 295 21 0 chr5 164504030 164504125 -35126025 + MIR SINE MIR 101 197 -65 23 33 0 0 chr5 164505020 164505050 -35125100 + AT_rich Low_complexity Low_complexity 1 30 0 356 250 30 98 chr5 164505103 164505267 -35124883 + MER5A DNA MER1_type 8 160 -29 285 151 0 0 chr5 164506236 164506289 -35123861 + CT-rich Low_complexity Low_complexity 2 54 0 527 165 0 7 chr5 164506974 164507217 -35122933 + AluSx SINE Alu 1 310 0 318 253 234 6 chr5 164507226 164507384 -35122766 - MER117 DNA MER1_type -2 195 2 287 296 0 0 chr5 164508097 164508177 -35121973 - MIR SINE MIR -56 152 84 364 264 61 34 chr5 164508832 164508980 -35121170 + MIR SINE MIR 111 262 0 341 263 10 10 chr5 164509224 164509323 -35120827 - MIR SINE MIR -78 130 32 363 154 0 0 chr5 164509739 164509804 -35120346 + CT-rich Low_complexity Low_complexity 3 67 0 488 275 109 9 chr5 164510819 164510898 -35119252 + L1MB7 LINE L1 5953 6023 -161 1923 79 0 8 chr5 164510898 164511138 -35119012 - AluSx SINE Alu -74 238 1 488 275 109 9 chr5 164511138 164511269 -35118881 + L1MB7 LINE L1 6023 6184 0 195 42 0 0 chr5 164512745 164512769 -35117381 + (CA)n Simple_repeat Simple_repeat 1 24 0 2401 94 16 0 chr5 164513102 164513409 -35116741 - AluSx SINE Alu 0 312 1 1560 187 19 41 chr5 164514082 164514398 -35115752 - AluJo SINE Alu -3 309 1 205 292 46 0 chr5 164514451 164514516 -35115634 + L2 LINE L2 3241 3308 -5 979 244 9 9 chr5 164514654 164514884 -35115266 - MIR SINE MIR 0 262 33 414 291 106 17 chr5 164514989 164515168 -35114982 + MIR3 SINE MIR 3 197 -11 659 319 104 23 chr5 164515463 164515849 -35114301 + L1MC4a LINE L1 5533 5949 -1859 184 196 36 54 chr5 164516647 164516703 -35113447 + L2 LINE L2 3218 3272 0 503 289 147 20 chr5 164517035 164517239 -35112911 + MIR SINE MIR 11 240 -22 213 298 0 0 chr5 164517242 164517299 -35112851 + (CTA)n Simple_repeat Simple_repeat 3 59 0 536 311 86 24 chr5 164517393 164517766 -35112384 - L2 LINE L2 -28 3285 2890 403 288 8 15 chr5 164517786 164517918 -35112232 - MIR SINE MIR -80 182 52 238 284 146 20 chr5 164518561 164518664 -35111486 + MIR SINE MIR 63 179 -29 201 227 23 0 chr5 164518952 164518996 -35111154 - MIR3 SINE MIR -10 198 154 273 233 81 12 chr5 164519172 164519258 -35110892 - MIR SINE MIR -72 136 45 249 319 9 44 chr5 164519886 164519999 -35110151 - MIR3 SINE MIR -35 173 65 233 295 0 0 chr5 164520264 164520325 -35109825 - MIR SINE MIR -127 81 21 197 217 0 0 chr5 164520346 164520392 -35109758 - L2 LINE L2 -1 3312 3267 340 293 38 0 chr5 164520539 164520645 -35109505 - L2 LINE L2 -4 3309 3200 425 287 8 0 chr5 164521177 164521299 -35108851 + MIR SINE MIR 47 169 -93 192 233 0 0 chr5 164521301 164521344 -35108806 + L2 LINE L2 3028 3070 -243 233 190 60 90 chr5 164521376 164521476 -35108674 + L2 LINE L2 3174 3270 -2 282 331 65 0 chr5 164521926 164522050 -35108100 + MIR SINE MIR 127 258 -4 576 316 26 18 chr5 164522056 164522284 -35107866 + MIR SINE MIR 1 230 -32 2176 130 7 0 chr5 164523360 164523668 -35106482 + AluSx SINE Alu 1 310 -2 266 205 217 0 chr5 164523689 164523772 -35106378 + L1MC/D LINE L1 5781 5881 -1927 522 157 9 70 chr5 164523967 164524082 -35106068 + MER5A DNA MER1_type 1 108 -81 350 214 343 0 chr5 164524242 164524382 -35105768 + MIR SINE MIR 70 257 -5 199 229 0 143 chr5 164524799 164524904 -35105246 - L2 LINE L2 -3 3310 3221 1222 198 48 17 chr5 164525190 164525483 -35104667 - L1ME LINE L1 -417 5749 5448 273 281 139 55 chr5 164525490 164525671 -35104479 - L2 LINE L2 -32 3281 3117 1420 183 79 32 chr5 164525671 164525950 -35104200 - AluJb SINE Alu -20 292 1 273 281 139 55 chr5 164525950 164526307 -35103843 - L2 LINE L2 -196 3117 2585 329 317 0 0 chr5 164526727 164526809 -35103341 - MIR3 SINE MIR -50 158 77 240 350 48 0 chr5 164527183 164527286 -35102864 - MIR SINE MIR -15 247 140 1916 114 65 0 chr5 164527319 164527624 -35102526 + AluSx SINE Alu 4 325 0 1742 147 88 59 chr5 164527624 164527998 -35102152 - MLT1B LTR MaLR -5 385 1 284 316 86 0 chr5 164528089 164528206 -35101944 - MIR3 SINE MIR -23 185 59 215 325 71 32 chr5 164528614 164528768 -35101382 + MIR3 SINE MIR 48 207 -1 234 244 24 49 chr5 164528975 164529057 -35101093 + MIR SINE MIR 110 189 -73 1742 169 67 3 chr5 164529112 164529455 -35100695 + MLT1A1 LTR MaLR 1 365 0 293 270 153 0 chr5 164529962 164530099 -35100051 - MER117 DNA MER1_type -3 194 37 761 296 39 14 chr5 164530427 164530707 -35099443 + MLT1K LTR MaLR 302 588 0 367 273 173 27 chr5 164531306 164531456 -35098694 + MLT1J LTR MaLR 331 502 -9 256 306 0 36 chr5 164532315 164532426 -35097724 - MIR SINE MIR -61 147 41 744 275 42 90 chr5 164533098 164533405 -35096745 + L2 LINE L2 2859 3179 -134 833 90 0 30 chr5 164533405 164533448 -35096702 - L1MB3 LINE L1 -1 6182 6139 1797 156 6 78 chr5 164533448 164533634 -35096516 - AluJo SINE Alu -3 309 111 861 101 0 17 chr5 164533634 164533812 -35096338 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 1797 156 6 78 chr5 164533812 164533823 -35096327 - AluJo SINE Alu -201 111 101 982 73 0 12 chr5 164533823 164533987 -35096163 + (TCTA)n Simple_repeat Simple_repeat 4 165 0 1797 156 6 78 chr5 164533987 164533998 -35096152 - AluJo SINE Alu -211 101 91 441 0 0 0 chr5 164533998 164534047 -35096103 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 1797 156 6 78 chr5 164534047 164534169 -35095981 - AluJo SINE Alu -221 91 1 833 90 0 30 chr5 164534169 164534258 -35095892 - L1MB3 LINE L1 -44 6139 6054 744 275 42 90 chr5 164534258 164534427 -35095723 + L2 LINE L2 3179 3312 -1 1280 199 53 32 chr5 164534917 164535258 -35094892 + MER96B DNA MER1_type? 62 409 -8 335 217 85 19 chr5 164535873 164535979 -35094171 + L1MB4 LINE L1 6025 6137 -43 1230 184 0 40 chr5 164535983 164536206 -35093944 + AluJb SINE Alu 87 300 -12 243 57 0 0 chr5 164536207 164536242 -35093908 + L1MB3 LINE L1 6142 6176 -7 2206 111 10 0 chr5 164536256 164536554 -35093596 + AluSq SINE Alu 1 301 -12 2240 87 33 17 chr5 164537428 164537728 -35092422 + AluSx SINE Alu 1 305 -7 220 300 112 0 chr5 164538168 164538338 -35091812 + L2 LINE L2 2722 2910 -404 2110 128 14 0 chr5 164538474 164538771 -35091379 - AluSx SINE Alu -11 301 1 295 280 112 0 chr5 164538814 164538921 -35091229 + L2 LINE L2 3181 3299 -14 454 283 0 9 chr5 164539795 164539908 -35090242 - MIR SINE MIR -65 143 32 279 263 158 11 chr5 164539920 164540015 -35090135 + MIR SINE MIR 21 129 -79 466 258 166 7 chr5 164540245 164540396 -35089754 + MER5A DNA MER1_type 9 183 -6 272 364 61 12 chr5 164540430 164540595 -35089555 + MIR SINE MIR 84 256 -6 403 260 220 7 chr5 164541123 164541273 -35088877 + MIR SINE MIR 79 260 -2 367 295 125 28 chr5 164541393 164541866 -35088284 + L2 LINE L2 2579 3099 -173 283 161 214 0 chr5 164541953 164542009 -35088141 + L2 LINE L2 3232 3299 -14 472 296 101 0 chr5 164542569 164542728 -35087422 - MIR SINE MIR -86 176 2 2300 112 6 13 chr5 164543164 164543478 -35086672 + AluSx SINE Alu 1 312 0 448 295 101 24 chr5 164544259 164544466 -35085684 - MIR SINE MIR 0 262 40 477 279 15 15 chr5 164544966 164545102 -35085048 + MIR SINE MIR 17 152 -110 1495 155 71 115 chr5 164545119 164545245 -35084905 - Charlie4a DNA MER1_type -1454 507 377 2258 97 4 0 chr5 164545245 164545524 -35084626 - AluSx SINE Alu -32 280 1 1495 155 71 115 chr5 164545524 164545893 -35084257 - Charlie4a DNA MER1_type -1584 377 34 1139 290 114 38 chr5 164546268 164547119 -35083031 + L2 LINE L2 2291 3209 -104 309 230 167 32 chr5 164547160 164547286 -35082864 - MIR SINE MIR -14 248 106 212 328 15 0 chr5 164547717 164547784 -35082366 - L3 LINE CR1 -2 1575 1508 566 271 0 24 chr5 164547806 164547976 -35082174 - MIR SINE MIR -90 172 7 304 200 63 21 chr5 164548032 164548127 -35082023 - MIR3 SINE MIR -7 201 103 270 0 0 0 chr5 164548608 164548638 -35081512 + (TG)n Simple_repeat Simple_repeat 1 30 0 279 385 51 26 chr5 164548705 164548861 -35081289 + MIR3 SINE MIR 46 205 -3 934 190 56 42 chr5 164549027 164549243 -35080907 - MER58A DNA MER1_type -2 222 4 282 230 133 18 chr5 164550177 164550290 -35079860 + L3 LINE CR1 1253 1378 -199 300 27 0 0 chr5 164550387 164550424 -35079726 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 290 259 25 0 chr5 164550481 164550562 -35079588 - MIR SINE MIR -74 188 106 1896 143 23 33 chr5 164551856 164552156 -35077994 - AluSx SINE Alu -15 297 1 401 241 43 21 chr5 164552182 164552323 -35077827 + MER5A DNA MER1_type 14 157 -32 796 234 71 5 chr5 164552977 164553174 -35076976 - MIR SINE MIR -16 246 37 728 231 35 20 chr5 164553440 164553639 -35076511 + MIR SINE MIR 49 250 -12 345 276 8 39 chr5 164553670 164553797 -35076353 - MIR SINE MIR -56 206 84 399 297 44 39 chr5 164553936 164554071 -35076079 - MER117 DNA MER1_type -1 196 58 6983 47 0 0 chr5 164554071 164555278 -35074872 - L1PA5 LINE L1 -3 6151 4951 399 297 44 39 chr5 164555278 164555324 -35074826 - MER117 DNA MER1_type -139 58 14 873 273 78 31 chr5 164555805 164556238 -35073912 + MLT1K LTR MaLR 97 580 -8 2009 132 9 41 chr5 164556626 164556767 -35073383 + AluJb SINE Alu 1 145 -167 2256 111 0 10 chr5 164556767 164557073 -35073077 + AluSx SINE Alu 1 303 -9 2009 132 9 41 chr5 164557073 164557250 -35072900 + AluJb SINE Alu 145 309 -3 440 280 225 10 chr5 164557699 164557899 -35072251 - MIR SINE MIR -14 248 6 229 253 38 38 chr5 164557906 164557985 -35072165 - MIR3 SINE MIR -21 187 109 219 268 165 55 chr5 164558139 164558266 -35071884 - L2 LINE L2 -20 3252 3112 246 329 146 49 chr5 164558269 164558296 -35071854 - L2 LINE L2 -411 2903 2880 2685 55 0 0 chr5 164558296 164558606 -35071544 + AluY SINE Alu 1 310 -1 246 329 146 49 chr5 164558606 164559107 -35071043 - L2 LINE L2 -434 2880 2324 350 307 45 28 chr5 164559390 164559566 -35070584 - MIR3 SINE MIR -8 200 22 360 270 70 9 chr5 164559666 164559781 -35070369 - MIR SINE MIR -55 207 86 198 71 0 0 chr5 164560052 164560080 -35070070 + (TC)n Simple_repeat Simple_repeat 1 28 0 483 265 41 27 chr5 164561249 164561396 -35068754 + MER117 DNA MER1_type 2 150 -47 356 288 106 0 chr5 164561657 164561789 -35068361 - MIR SINE MIR -70 192 47 307 291 44 51 chr5 164561835 164561939 -35068211 - L3 LINE CR1 -91 1486 1382 2432 89 0 3 chr5 164561939 164562241 -35067909 - AluSx SINE Alu -11 301 1 307 291 44 51 chr5 164562241 164562294 -35067856 - L3 LINE CR1 -195 1382 1330 401 299 22 7 chr5 164562617 164562754 -35067396 - MIR3 SINE MIR -8 200 62 307 292 139 7 chr5 164563577 164563714 -35066436 + L2 LINE L2 3159 3313 0 275 256 95 54 chr5 164564464 164564632 -35065518 + L3 LINE CR1 1261 1435 -142 432 0 0 0 chr5 164565051 164565099 -35065051 + (TG)n Simple_repeat Simple_repeat 1 48 0 378 0 0 0 chr5 164565198 164565240 -35064910 + (TG)n Simple_repeat Simple_repeat 1 42 0 387 0 0 0 chr5 164565335 164565378 -35064772 + (TG)n Simple_repeat Simple_repeat 2 44 0 210 245 0 0 chr5 164566370 164566419 -35063731 - MIR SINE MIR -161 101 53 29 0 0 0 chr5 164566769 164566798 -35063352 + AT_rich Low_complexity Low_complexity 1 29 0 439 265 29 37 chr5 164566847 164566983 -35063167 - MIR3 SINE MIR -70 138 4 419 275 22 7 chr5 164567529 164567667 -35062483 + MER117 DNA MER1_type 19 158 -39 201 74 0 0 chr5 164568558 164568585 -35061565 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 259 308 21 49 chr5 164568699 164568842 -35061308 - MIR SINE MIR -11 251 113 2287 177 16 0 chr5 164570356 164570740 -35059410 + MLT1B LTR MaLR 1 390 0 254 196 163 11 chr5 164571136 164571228 -35058922 + MIR SINE MIR 103 208 -54 536 262 0 28 chr5 164571251 164571396 -35058754 - MER63 DNA MER1_type -69 767 1 1023 278 89 24 chr5 164571660 164572042 -35058108 + MER115 DNA AcHobo 8 414 -279 1435 142 81 0 chr5 164572311 164572557 -35057593 - AluJo SINE Alu -5 307 42 393 238 55 43 chr5 164572559 164572702 -35057448 - MIR SINE MIR -53 155 38 27 0 0 0 chr5 164572989 164573016 -35057134 + AT_rich Low_complexity Low_complexity 1 27 0 195 195 23 126 chr5 164573082 164573124 -35057026 - MIR3 SINE MIR -22 186 156 2056 194 133 2 chr5 164573124 164573567 -35056583 + MLT1D LTR MaLR 5 505 0 195 195 23 126 chr5 164573567 164573611 -35056539 - MIR3 SINE MIR -52 156 109 2958 114 0 0 chr5 164573804 164574208 -35055942 + Charlie3 DNA MER1_type 4 407 -2303 1877 134 0 56 chr5 164574208 164574348 -35055802 + AluSx SINE Alu 1 147 -165 1487 98 0 0 chr5 164574348 164574542 -35055608 + AluSq SINE Alu 2 195 -118 1877 134 0 56 chr5 164574542 164574721 -35055429 + AluSx SINE Alu 147 302 -10 904 186 6 0 chr5 164574721 164574877 -35055273 + AluJb SINE Alu 134 290 -22 343 67 0 0 chr5 164574877 164574922 -35055228 + Charlie3 DNA MER1_type 398 442 -2268 * 3393 62 4 43 chr5 164574916 164575400 -35054750 + Charlie3 DNA MER1_type 2242 2706 -4 220 312 158 35 chr5 164575412 164575614 -35054536 + L3 LINE CR1 1336 1562 -15 370 313 56 25 chr5 164576603 164576801 -35053349 + MIR SINE MIR 44 247 -15 432 247 36 48 chr5 164577161 164577279 -35052871 - MIR SINE MIR 0 262 145 2196 54 0 11 chr5 164577279 164577555 -35052595 - AluY SINE Alu -8 303 31 432 247 36 48 chr5 164577555 164577602 -35052548 - MIR SINE MIR -117 145 99 989 158 12 29 chr5 164577857 164578028 -35052122 + LTR58 LTR ERV1 1 168 -511 252 195 46 0 chr5 164578323 164578410 -35051740 + MER113 DNA MER1_type? 24 114 -407 755 174 6 81 chr5 164578616 164578788 -35051362 - AluSq SINE Alu -153 160 2 1811 202 46 78 chr5 164578804 164579329 -35050821 + L1ME1 LINE L1 5517 6024 -142 293 377 0 0 chr5 164579639 164579745 -35050405 + MIR SINE MIR 37 142 -66 361 340 78 33 chr5 164579785 164580029 -35050121 + L1MC4a LINE L1 5039 5293 -853 2117 120 0 0 chr5 164580029 164580328 -35049822 + AluSx SINE Alu 1 299 -13 1257 294 54 20 chr5 164580348 164580903 -35049247 + L1MC4a LINE L1 5312 5885 -1923 1945 138 10 0 chr5 164584079 164584375 -35045775 + AluSx SINE Alu 12 310 -2 426 202 43 0 chr5 164584375 164584469 -35045681 - L1ME3A LINE L1 -321 5849 5752 1714 264 106 24 chr5 164584474 164585147 -35045003 - L1M4 LINE L1 -2596 3786 3170 2113 93 0 0 chr5 164585147 164585425 -35044725 + AluY SINE Alu 1 278 -33 423 0 0 0 chr5 164585425 164585472 -35044678 + (CA)n Simple_repeat Simple_repeat 1 47 0 1714 264 106 24 chr5 164585472 164585572 -35044578 - L1M4 LINE L1 -3212 3170 3080 2448 77 0 0 chr5 164585572 164585884 -35044266 - AluSx SINE Alu 0 312 1 1714 264 106 24 chr5 164585884 164586363 -35043787 - L1M4 LINE L1 -3302 3080 2429 1589 152 0 63 chr5 164586384 164586537 -35043613 - AluJb SINE Alu -23 289 128 257 0 30 0 chr5 164586537 164586570 -35043580 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1888 141 0 3 chr5 164586570 164586853 -35043297 - AluSx SINE Alu -30 282 1 1589 152 0 63 chr5 164586853 164587000 -35043150 - AluJb SINE Alu -182 130 7 1135 138 5 21 chr5 164587010 164587027 -35043123 - AluSp SINE Alu -8 305 289 243 0 0 0 chr5 164587027 164587054 -35043096 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 1135 138 5 21 chr5 164587054 164587208 -35042942 - AluSp SINE Alu -24 289 135 1833 170 3 3 chr5 164587208 164587514 -35042636 - AluJo SINE Alu -6 306 1 1135 138 5 21 chr5 164587514 164587530 -35042620 - AluSp SINE Alu -178 135 120 486 280 133 7 chr5 164587531 164587681 -35042469 - L1M4 LINE L1 -3947 2437 2269 212 316 144 0 chr5 164587782 164587921 -35042229 + L2 LINE L2 2902 3060 -212 292 341 125 0 chr5 164588061 164588269 -35041881 + L3 LINE CR1 1154 1387 -190 285 387 0 0 chr5 164588387 164588493 -35041657 + MIR SINE MIR 37 142 -66 264 119 0 0 chr5 164588760 164588802 -35041348 + Alu SINE Alu 253 294 -8 216 0 0 0 chr5 164588804 164588828 -35041322 + (TA)n Simple_repeat Simple_repeat 2 25 0 853 138 15 0 chr5 164588828 164588958 -35041192 - AluSq/x SINE Alu -180 132 1 1548 180 13 20 chr5 164588958 164589263 -35040887 - AluJo SINE Alu -3 309 7 895 274 29 4 chr5 164589271 164589516 -35040634 - MIR SINE MIR -8 254 4 221 350 52 0 chr5 164590430 164590527 -35039623 + L2 LINE L2 3171 3272 0 189 356 101 20 chr5 164590595 164590744 -35039406 - L2 LINE L2 -19 3294 3134 322 264 44 0 chr5 164590764 164590855 -35039295 + MER94 DNA DNA 11 105 -29 690 313 39 0 chr5 164590861 164591091 -35039059 - MIR SINE MIR -13 249 11 190 300 164 9 chr5 164591137 164591247 -35038903 + MIR SINE MIR 20 146 -116 370 321 142 23 chr5 164591305 164591607 -35038543 - L2 LINE L2 -36 3236 2899 317 335 56 6 chr5 164591851 164592012 -35038138 - L2 LINE L2 -454 2860 2692 231 265 87 0 chr5 164592666 164592756 -35037394 + MIR SINE MIR 85 192 -70 515 317 35 9 chr5 164592885 164593115 -35037035 - MER113 DNA MER1_type? -81 440 205 378 293 13 40 chr5 164593143 164593345 -35036805 + L1ME4a LINE L1 5566 5766 -355 2799 155 37 21 chr5 164593345 164593880 -35036270 + LTR10A LTR ERV1 1 544 -65 364 321 11 80 chr5 164593906 164594168 -35035982 + L1ME4a LINE L1 5762 6005 -116 188 329 25 13 chr5 164595022 164595101 -35035049 + MIR SINE MIR 36 115 -93 328 198 21 52 chr5 164595101 164595197 -35034953 + MIR SINE MIR 24 116 -92 443 133 0 13 chr5 164595238 164595313 -35034837 + LTR24B LTR ERV1 4 77 -499 491 267 60 18 chr5 164595424 164595674 -35034476 + LTR24B LTR ERV1 178 538 -38 404 278 32 0 chr5 164595715 164595841 -35034309 + MIR SINE MIR 128 257 -5 233 321 94 28 chr5 164595877 164595983 -35034167 - MIR SINE MIR -63 145 33 286 223 20 26 chr5 164596684 164596779 -35033371 + CT-rich Low_complexity Low_complexity 2 151 0 216 273 36 0 chr5 164597144 164597199 -35032951 - MIR SINE MIR -62 146 90 433 309 15 0 chr5 164598203 164598339 -35031811 - MIR3 SINE MIR -14 194 57 258 279 0 63 chr5 164598875 164598954 -35031196 - MIR3 SINE MIR -19 189 116 389 269 17 8 chr5 164599545 164599664 -35030486 - MIR SINE MIR -131 131 12 256 284 0 25 chr5 164599692 164599773 -35030377 - MIR SINE MIR -62 200 122 2262 91 13 0 chr5 164599773 164600082 -35030068 + AluSp SINE Alu 1 313 0 291 189 126 32 chr5 164600293 164600388 -35029762 - MIR SINE MIR -71 137 33 315 0 0 0 chr5 164600987 164601022 -35029128 + (CA)n Simple_repeat Simple_repeat 1 35 0 285 323 24 24 chr5 164601311 164601438 -35028712 - MIR3 SINE MIR 0 208 82 680 272 100 16 chr5 164602517 164602894 -35027256 + MLT1K LTR MaLR 144 588 0 331 312 26 32 chr5 164603200 164603354 -35026796 - MIR3 SINE MIR -15 193 41 407 308 186 0 chr5 164606736 164606957 -35023193 + MIR SINE MIR 1 262 0 468 293 49 18 chr5 164609602 164609766 -35020384 - MIR3 SINE MIR -3 205 37 203 232 0 36 chr5 164610030 164610086 -35020064 - MIR SINE MIR -78 130 77 2266 105 0 0 chr5 164611602 164611907 -35018243 + AluSg SINE Alu 2 306 -4 358 293 43 109 chr5 164612472 164612896 -35017254 + L2 LINE L2 2771 3171 -101 1232 233 33 7 chr5 164614872 164615172 -35014978 - MER113 DNA MER1_type? -133 388 81 678 256 124 76 chr5 164615176 164615724 -35014426 + L2 LINE L2 2716 3295 -18 231 256 23 23 chr5 164615726 164615812 -35014338 - MER113 DNA MER1_type? -433 88 3 317 186 283 26 chr5 164615814 164615927 -35014223 - MIR3 SINE MIR -48 160 19 201 291 0 0 chr5 164615959 164616014 -35014136 + G-rich Low_complexity Low_complexity 5 59 0 429 214 107 7 chr5 164616163 164616303 -35013847 - MIR3 SINE MIR -19 189 36 310 272 71 49 chr5 164616501 164616685 -35013465 + L2 LINE L2 3075 3262 -51 275 323 5 54 chr5 164617255 164617441 -35012709 + (TTGGGG)n Simple_repeat Simple_repeat 3 179 0 694 250 0 0 chr5 164618166 164618302 -35011848 - L2 LINE L2 0 3313 3178 772 263 107 9 chr5 164618344 164618568 -35011582 - MIR SINE MIR -13 249 4 398 292 23 8 chr5 164618571 164618701 -35011449 + MIR SINE MIR 61 192 -70 280 248 96 89 chr5 164619088 164619245 -35010905 + MIR3 SINE MIR 38 195 -13 336 294 35 53 chr5 164621294 164621464 -35008686 + MIR3 SINE MIR 29 195 -13 296 265 0 0 chr5 164621809 164621877 -35008273 - MIR SINE MIR -115 147 80 525 258 5 0 chr5 164621888 164622097 -35008053 + (CAGAGA)n Simple_repeat Simple_repeat 1 210 0 226 220 85 93 chr5 164623383 164623501 -35006649 + MIR3 SINE MIR 77 193 -15 406 225 22 0 chr5 164623657 164623746 -35006404 + MIR3 SINE MIR 67 157 -51 2337 85 0 0 chr5 164623747 164624042 -35006108 + AluSc SINE Alu 1 295 -14 761 281 57 4 chr5 164625389 164625617 -35004533 - MIR SINE MIR -21 241 2 280 254 9 123 chr5 164626120 164626234 -35003916 - MIR3 SINE MIR -7 201 101 202 321 161 36 chr5 164626472 164626584 -35003566 - MIR3 SINE MIR -79 129 4 405 278 83 6 chr5 164626603 164626671 -35003479 + MIR3 SINE MIR 20 81 -127 4058 148 46 6 chr5 164626671 164627348 -35002802 - MER44D DNA MER2_type -1 704 1 405 278 83 6 chr5 164627348 164627448 -35002702 + MIR3 SINE MIR 81 201 -7 196 298 165 0 chr5 164628227 164628348 -35001802 + L2 LINE L2 2636 2776 -538 362 153 0 0 chr5 164629011 164629070 -35001080 + Tigger2 DNA MER2_type 1 59 -2659 1858 156 74 13 chr5 164629091 164629481 -35000669 + Tigger2 DNA MER2_type 2305 2718 0 609 286 62 0 chr5 164629498 164629676 -35000474 - MIR SINE MIR -43 219 31 997 79 146 12 chr5 164629784 164629948 -35000202 + AluSq SINE Alu 121 306 -7 314 283 28 102 chr5 164630123 164630300 -34999850 - L3 LINE CR1 -112 1465 1302 732 267 5 24 chr5 164630386 164630592 -34999558 - MIR SINE MIR -35 227 26 1024 94 0 88 chr5 164630593 164630763 -34999387 - FRAM SINE Alu -14 162 8 221 331 117 14 chr5 164630871 164631016 -34999134 - MIR3 SINE MIR -4 204 45 544 202 98 38 chr5 164631752 164631930 -34998220 + MIR SINE MIR 59 255 -7 201 310 56 0 chr5 164632148 164632219 -34997931 - MIR SINE MIR -84 124 50 213 216 0 0 chr5 164632764 164632801 -34997349 + L2 LINE L2 3218 3254 -18 701 170 22 0 chr5 164633338 164633473 -34996677 - MER45A DNA AcHobo 0 178 41 312 161 0 0 chr5 164633539 164633601 -34996549 + (TCCA)n Simple_repeat Simple_repeat 3 64 0 498 309 13 20 chr5 164634277 164634429 -34995721 + MIR3 SINE MIR 42 192 -16 191 340 0 43 chr5 164635032 164635126 -34995024 - L3 LINE CR1 -138 1439 1350 387 295 16 25 chr5 164635269 164635391 -34994759 - MIR3 SINE MIR -6 202 82 441 222 111 9 chr5 164635514 164635622 -34994528 + MIR SINE MIR 32 150 -112 2293 92 0 10 chr5 164635624 164635929 -34994221 + AluSx SINE Alu 1 302 -10 210 37 0 0 chr5 164635972 164635999 -34994151 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1774 87 4 0 chr5 164636024 164636254 -34993896 - AluSx SINE Alu -81 231 1 245 307 13 13 chr5 164636265 164636340 -34993810 - L2 LINE L2 -4 3309 3235 330 324 18 17 chr5 164636960 164637096 -34993054 - MIR SINE MIR -69 139 2 218 301 41 65 chr5 164637101 164637224 -34992926 - MIR SINE MIR -72 136 17 209 351 103 18 chr5 164637307 164637472 -34992678 + L3b LINE CR1 1278 1456 -127 454 301 67 11 chr5 164637498 164637697 -34992453 + MIR SINE MIR 37 251 -11 605 276 53 22 chr5 164638341 164638585 -34991565 + MIR SINE MIR 7 250 -12 262 367 28 0 chr5 164638573 164638682 -34991468 - L2 LINE L2 -505 2809 2698 * 207 0 0 0 chr5 164639345 164639368 -34990782 + (T)n Simple_repeat Simple_repeat 1 23 0 207 127 7 2 chr5 164640287 164640322 -34989828 + MIR SINE MIR 106 197 -11 447 313 96 17 chr5 164640360 164640590 -34989560 - L2 LINE L2 -1 3271 3024 187 228 64 93 chr5 164640594 164640703 -34989447 - MIR SINE MIR -24 184 80 462 200 70 0 chr5 164640786 164640886 -34989264 - MIR SINE MIR -62 146 40 2283 98 3 0 chr5 164641019 164641325 -34988825 - AluSg SINE Alu -3 307 1 185 346 10 48 chr5 164641521 164641625 -34988525 - MIR SINE MIR -94 168 69 301 326 152 0 chr5 164642103 164642241 -34987909 + MIR3 SINE MIR 18 176 -32 500 243 57 21 chr5 164642567 164642755 -34987395 + MIR SINE MIR 10 201 -61 537 279 70 29 chr5 164643196 164643368 -34986782 + MIR SINE MIR 17 195 -67 2290 91 3 0 chr5 164643432 164643729 -34986421 + AluSp SINE Alu 1 298 -15 372 320 97 34 chr5 164643764 164643939 -34986211 - MIR3 SINE MIR -3 205 20 337 292 81 17 chr5 164644234 164644396 -34985754 - MIR3 SINE MIR -67 141 9 563 294 151 9 chr5 164644888 164645440 -34984710 - L2 LINE L2 0 3313 2614 255 325 25 42 chr5 164645983 164646103 -34984047 - MIR SINE MIR -61 147 30 206 286 187 0 chr5 164646516 164646607 -34983543 - MIR SINE MIR -72 136 29 2448 67 3 0 chr5 164646872 164647184 -34982966 + AluSq SINE Alu 1 313 0 775 289 10 10 chr5 164647186 164647390 -34982760 + MIR SINE MIR 59 262 0 450 322 174 40 chr5 164647904 164648277 -34981873 + L2 LINE L2 2850 3272 0 481 330 173 25 chr5 164648342 164648781 -34981369 - L3 LINE CR1 -10 1567 1064 791 226 0 6 chr5 164649141 164649309 -34980841 + MER45A DNA AcHobo 1 167 -11 1020 222 69 25 chr5 164649761 164650121 -34980029 + L1MC5 LINE L1 7555 7930 -31 210 37 0 0 chr5 164650187 164650214 -34979936 + (CA)n Simple_repeat Simple_repeat 1 27 0 32 0 0 0 chr5 164651013 164651045 -34979105 + GC_rich Low_complexity Low_complexity 1 32 0 23 54 0 0 chr5 164651079 164651116 -34979034 + GC_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 164651151 164651172 -34978978 + GC_rich Low_complexity Low_complexity 1 21 0 23 86 0 0 chr5 164651226 164651284 -34978866 + GC_rich Low_complexity Low_complexity 1 58 0 241 333 99 18 chr5 164651564 164651675 -34978475 - MIR3 SINE MIR -52 156 37 199 283 33 0 chr5 164651780 164651840 -34978310 + MIR SINE MIR 73 134 -74 913 252 35 20 chr5 164652545 164652799 -34977351 - MIR SINE MIR 0 262 5 1055 296 100 9 chr5 164653993 164654527 -34975623 + L2 LINE L2 2732 3312 -1 268 213 111 0 chr5 164655097 164655187 -34974963 - MIR3 SINE MIR -15 193 93 2311 80 0 3 chr5 164655382 164655683 -34974467 - AluY SINE Alu -11 300 1 288 308 195 31 chr5 164655805 164656000 -34974150 + MIR SINE MIR 17 243 -19 219 298 122 65 chr5 164656082 164656361 -34973789 + L2 LINE L2 2945 3239 -33 728 280 14 23 chr5 164656361 164656575 -34973575 - MIR SINE MIR -3 259 48 211 236 24 134 chr5 164657258 164657385 -34972765 - L2 LINE L2 0 3272 3160 458 327 70 12 chr5 164657412 164657669 -34972481 + L2 LINE L2 2922 3193 -120 441 281 128 10 chr5 164657820 164658023 -34972127 - L2 LINE L2 -713 2601 2375 271 279 135 19 chr5 164658024 164658128 -34972022 - L2 LINE L2 -1 3312 3197 202 276 69 0 chr5 164658127 164658214 -34971936 - MIR SINE MIR -78 130 38 * 280 336 120 32 chr5 164658288 164658505 -34971645 + L3 LINE CR1 1128 1363 -214 974 175 148 6 chr5 164658559 164658742 -34971408 + MER3 DNA MER1_type 1 209 0 2347 87 0 0 chr5 164658824 164659124 -34971026 - AluSq SINE Alu -13 300 1 457 325 20 35 chr5 164659190 164659387 -34970763 - MIR SINE MIR -49 213 20 210 248 295 9 chr5 164659772 164659877 -34970273 - MIR3 SINE MIR -59 149 15 206 414 48 0 chr5 164660002 164660106 -34970044 - MIR SINE MIR -56 152 44 204 260 96 27 chr5 164660724 164660797 -34969353 - MIR SINE MIR -81 127 50 287 290 142 16 chr5 164660800 164660928 -34969222 - MER5A DNA MER1_type -13 176 21 303 241 45 80 chr5 164661331 164661443 -34968707 - L3 LINE CR1 -15 1562 1455 288 240 248 8 chr5 164661585 164661706 -34968444 + MIR SINE MIR 32 181 -81 370 234 20 16 chr5 164661753 164661863 -34968287 - MIR SINE MIR -62 146 45 359 325 68 25 chr5 164662054 164662217 -34967933 + MER5B DNA MER1_type 9 178 0 190 100 0 0 chr5 164662640 164662670 -34967480 - MIR SINE MIR -138 70 41 640 325 119 8 chr5 164662795 164663272 -34966878 - L1MC4a LINE L1 -1817 5991 5462 180 304 125 18 chr5 164663492 164663604 -34966546 + MIR SINE MIR 20 143 -65 192 330 55 11 chr5 164663992 164664083 -34966067 + MIR3 SINE MIR 84 178 -30 1238 246 119 36 chr5 164664961 164665310 -34964840 + L2 LINE L2 2585 2903 -410 2069 120 0 35 chr5 164665310 164665626 -34964524 - AluSx SINE Alu -7 305 1 1238 246 119 36 chr5 164665626 164665934 -34964216 + L2 LINE L2 2903 3307 -6 364 246 177 8 chr5 164666335 164666465 -34963685 - MER5A DNA MER1_type -37 152 1 305 339 52 0 chr5 164666488 164666634 -34963516 + MIR SINE MIR 18 181 -81 187 282 84 56 chr5 164667796 164667938 -34962212 + MIR3 SINE MIR 41 186 -22 388 283 40 103 chr5 164669090 164669313 -34960837 - L2 LINE L2 -98 3174 2966 266 288 0 14 chr5 164669726 164669799 -34960351 + MIR SINE MIR 81 152 -56 440 277 21 7 chr5 164669820 164669961 -34960189 - MER103 DNA DNA -7 159 17 429 303 71 19 chr5 164670068 164670223 -34959927 + MIR SINE MIR 13 175 -87 199 296 83 28 chr5 164670528 164670636 -34959514 + L3 LINE CR1 1357 1470 -107 309 26 0 0 chr5 164671018 164671056 -34959094 + (TG)n Simple_repeat Simple_repeat 2 39 0 23 54 0 0 chr5 164671353 164671390 -34958760 + AT_rich Low_complexity Low_complexity 1 37 0 1714 191 3 3 chr5 164671720 164672023 -34958127 + AluJo SINE Alu 1 303 -9 375 248 85 46 chr5 164672093 164672246 -34957904 + MIR3 SINE MIR 2 160 -48 226 305 92 21 chr5 164672689 164672830 -34957320 + MIR SINE MIR 102 252 -10 568 260 139 0 chr5 164673547 164673734 -34956416 + MIR SINE MIR 41 255 -7 283 330 26 26 chr5 164673782 164673897 -34956253 - MIR SINE MIR -6 256 142 254 297 44 0 chr5 164673915 164674006 -34956144 - MIR SINE MIR -87 175 81 227 286 110 0 chr5 164675151 164675242 -34954908 + MIR SINE MIR 30 130 -132 204 143 0 0 chr5 164675368 164675410 -34954740 + (CA)n Simple_repeat Simple_repeat 2 43 0 2554 58 0 0 chr5 164675466 164675777 -34954373 - AluY SINE Alu 0 311 1 425 288 34 0 chr5 164675914 164676032 -34954118 - MIR SINE MIR -34 228 107 571 281 45 11 chr5 164676183 164676361 -34953789 + MIR3 SINE MIR 4 187 -21 519 297 11 16 chr5 164677701 164677886 -34952264 - L3 LINE CR1 -336 1241 1058 * 653 317 12 35 chr5 164677877 164678136 -34952014 + MIR SINE MIR 8 260 -2 221 163 0 0 chr5 164678138 164678181 -34951969 + (CAT)n Simple_repeat Simple_repeat 2 44 0 2248 96 0 0 chr5 164678195 164678497 -34951653 + AluY SINE Alu 1 302 -9 366 333 158 8 chr5 164678497 164678731 -34951419 - L3 LINE CR1 -542 1035 767 309 300 78 11 chr5 164679313 164679493 -34950657 + L2 LINE L2 1564 1755 -1559 478 316 108 14 chr5 164679511 164679723 -34950427 - MIR SINE MIR -19 243 12 320 308 48 58 chr5 164679774 164679982 -34950168 - MLT1K LTR MaLR -27 561 356 341 281 86 43 chr5 164680511 164680650 -34949500 - L2 LINE L2 0 3313 3169 656 257 69 34 chr5 164681414 164681654 -34948496 + MIR SINE MIR 17 256 -6 293 236 28 0 chr5 164681686 164681758 -34948392 + MIR SINE MIR 105 178 -84 223 380 85 0 chr5 164681871 164682000 -34948150 + MIR SINE MIR 119 258 -4 784 19 39 0 chr5 164682085 164682189 -34947961 + (GAAA)n Simple_repeat Simple_repeat 2 109 0 253 321 25 0 chr5 164682197 164682278 -34947872 - MIR SINE MIR -103 105 23 538 291 182 8 chr5 164682614 164682859 -34947291 - LTR33 LTR ERVL 0 521 320 477 0 0 0 chr5 164682859 164682912 -34947238 + (TG)n Simple_repeat Simple_repeat 1 53 0 538 291 182 8 chr5 164682912 164683023 -34947127 - LTR33 LTR ERVL -201 320 103 316 149 3 0 chr5 164683030 164683090 -34947060 - AluJ/FLAM SINE Alu -211 91 37 278 259 222 0 chr5 164683601 164683709 -34946441 + L2 LINE L2 3132 3263 -9 1042 284 96 0 chr5 164683776 164684132 -34946018 - MLT1K LTR MaLR -82 506 117 2241 109 0 0 chr5 164684258 164684561 -34945589 + AluSx SINE Alu 1 303 -9 213 250 259 31 chr5 164684847 164685071 -34945079 - L2 LINE L2 -640 2674 2400 23 33 0 0 chr5 164685385 164685415 -34944735 + AT_rich Low_complexity Low_complexity 1 30 0 1027 184 48 0 chr5 164685418 164685625 -34944525 - L1MA8 LINE L1 -4 6287 6071 381 289 10 1 chr5 164685656 164685770 -34944380 - MIR SINE MIR -62 146 38 658 314 31 18 chr5 164685824 164686050 -34944100 - MIR SINE MIR -2 260 32 274 278 109 0 chr5 164686125 164686280 -34943870 - MIR3 SINE MIR -21 187 14 2176 107 3 0 chr5 164686840 164687139 -34943011 + AluSx SINE Alu 1 300 -12 196 311 27 14 chr5 164687501 164687575 -34942575 - L2 LINE L2 -1 3312 3238 455 0 18 0 chr5 164687857 164687912 -34942238 + (TG)n Simple_repeat Simple_repeat 2 57 0 331 275 31 69 chr5 164688239 164688399 -34941751 + MIR SINE MIR 2 155 -107 188 312 52 0 chr5 164689902 164689979 -34940171 - MIR SINE MIR -103 105 25 403 255 185 43 chr5 164690390 164690574 -34939576 - MER63A DNA MER1_type 0 210 1 322 287 11 0 chr5 164690705 164690792 -34939358 + MIR SINE MIR 48 135 -73 348 262 0 39 chr5 164691082 164691185 -34938965 + MIR SINE MIR 39 137 -125 408 127 0 0 chr5 164691186 164691257 -34938893 - Alu SINE Alu 0 311 241 1835 118 55 0 chr5 164691293 164691564 -34938586 - AluSq SINE Alu -2 311 26 209 291 51 0 chr5 164691564 164691643 -34938507 + MIR SINE MIR 122 204 -58 490 287 89 59 chr5 164691660 164691897 -34938253 + MIR SINE MIR 2 245 -17 1083 185 14 45 chr5 164691904 164692126 -34938024 + MER20 DNA MER1_type 1 215 -4 983 246 137 18 chr5 164692154 164692678 -34937472 - L2 LINE L2 -82 3231 2642 429 295 106 5 chr5 164693083 164693290 -34936860 - MIR SINE MIR 0 262 35 362 240 157 16 chr5 164693893 164694014 -34936136 - MIR3 SINE MIR -51 157 20 360 264 64 9 chr5 164695302 164695412 -34934738 - MIR3 SINE MIR -34 174 59 499 250 157 17 chr5 164696578 164696750 -34933400 - Charlie8 DNA MER1_type -2152 265 70 2245 75 7 0 chr5 164696763 164697056 -34933094 + AluY SINE Alu 3 297 -14 182 367 13 0 chr5 164697142 164697221 -34932929 - MIR SINE MIR -106 102 23 456 287 89 13 chr5 164697951 164698108 -34932042 + MIR SINE MIR 1 169 -93 843 238 31 0 chr5 164698769 164698962 -34931188 + AluJo SINE Alu 1 199 -113 1652 185 3 19 chr5 164698962 164699276 -34930874 - AluJb SINE Alu -3 309 1 247 312 29 43 chr5 164699409 164699547 -34930603 + MIR SINE MIR 99 234 -28 230 216 45 102 chr5 164699539 164699627 -34930523 - MIR3 SINE MIR -12 196 114 * 241 269 167 28 chr5 164699678 164699786 -34930364 + MIR3 SINE MIR 36 158 -50 307 296 53 46 chr5 164700354 164700506 -34929644 - MER5A DNA MER1_type -34 155 3 306 155 17 0 chr5 164700516 164700574 -34929576 - MIR SINE MIR -64 144 86 303 389 67 16 chr5 164701343 164701536 -34928614 + MIR SINE MIR 57 259 -3 285 296 73 104 chr5 164701578 164701865 -34928285 - L2 LINE L2 -2 3270 2993 362 224 47 0 chr5 164702746 164702853 -34927297 - MER115 DNA AcHobo -493 200 89 269 200 17 0 chr5 164702855 164702915 -34927235 - MER81 DNA DNA -2 112 52 242 164 98 0 chr5 164703186 164703247 -34926903 - MIR SINE MIR -57 151 85 366 275 169 7 chr5 164703315 164703457 -34926693 + MLT1K LTR MaLR 103 267 -321 210 162 0 0 chr5 164703676 164703713 -34926437 + A-rich Low_complexity Low_complexity 1 37 0 207 0 0 0 chr5 164703918 164703941 -34926209 + (TTA)n Simple_repeat Simple_repeat 2 24 0 472 226 92 37 chr5 164704193 164704357 -34925793 - MIR3 SINE MIR -28 180 8 817 259 66 4 chr5 164707713 164707956 -34922194 - Charlie8 DNA MER1_type -2141 276 19 207 324 0 15 chr5 164708360 164708428 -34921722 - MER5A DNA MER1_type -26 163 97 213 284 0 15 chr5 164708812 164708879 -34921271 - MIR3 SINE MIR -52 156 91 839 150 0 0 chr5 164708927 164709060 -34921090 + AluJb SINE Alu 1 133 -179 438 53 0 0 chr5 164709087 164709144 -34921006 + (GA)n Simple_repeat Simple_repeat 2 58 0 2062 122 0 3 chr5 164709782 164710094 -34920056 - AluSx SINE Alu 0 311 1 405 250 48 90 chr5 164710268 164710456 -34919694 + MIR3 SINE MIR 14 193 -15 1180 114 6 0 chr5 164710507 164710673 -34919477 + AluSx SINE Alu 5 171 -141 266 242 42 21 chr5 164711185 164711280 -34918870 - L2 LINE L2 -94 3219 3123 2204 111 0 0 chr5 164711291 164711589 -34918561 + AluSx SINE Alu 1 298 -14 668 112 0 20 chr5 164711683 164711781 -34918369 + FRAM SINE Alu 60 155 -21 2175 118 0 0 chr5 164711801 164712097 -34918053 + AluSx SINE Alu 1 296 -16 954 264 72 36 chr5 164712457 164712820 -34917330 - L2 LINE L2 -89 3224 2849 241 354 69 7 chr5 164712824 164712968 -34917182 - MIR SINE MIR -18 244 92 1998 148 7 3 chr5 164713467 164713772 -34916378 - AluJo SINE Alu -6 306 1 438 174 11 22 chr5 164714307 164714399 -34915751 + AluJ/FRAM SINE Alu 220 310 -2 1953 143 14 0 chr5 164714404 164714698 -34915452 + AluSx SINE Alu 2 299 -13 259 267 222 0 chr5 164715205 164715295 -34914855 + MIR3 SINE MIR 13 122 -86 335 318 123 13 chr5 164715322 164715476 -34914674 + MER5B DNA MER1_type 7 177 -1 267 200 43 29 chr5 164716183 164716253 -34913897 - MIR3 SINE MIR -50 158 88 240 376 10 10 chr5 164716474 164716575 -34913575 - L2 LINE L2 -211 3061 2961 527 200 48 0 chr5 164716866 164716991 -34913159 + MIR3 SINE MIR 57 187 -21 249 271 106 50 chr5 164717019 164717218 -34912932 + L1MC4a LINE L1 5533 5742 -379 342 324 112 12 chr5 164717265 164717435 -34912715 + MIR SINE MIR 76 262 0 375 313 30 0 chr5 164717442 164717566 -34912584 + L1MC4a LINE L1 5814 5944 -1864 2308 109 3 0 chr5 164717566 164717877 -34912273 + AluSx SINE Alu 1 312 0 360 238 119 0 chr5 164718298 164718399 -34911751 - MIR3 SINE MIR -15 193 81 432 277 34 8 chr5 164719195 164719314 -34910836 - L2 LINE L2 0 3313 3192 247 250 0 0 chr5 164719320 164719376 -34910774 + MER106B DNA MER1_type 1 56 -1003 282 222 111 12 chr5 164719831 164719912 -34910238 - MLT1K LTR MaLR -1 587 499 2342 164 92 4 chr5 164720088 164720569 -34909581 + L1MB5 LINE L1 5528 6050 -124 379 250 269 0 chr5 164720780 164720936 -34909214 - MER3 DNA MER1_type -10 199 2 1884 109 88 14 chr5 164720960 164721245 -34908905 - AluSq SINE Alu -7 306 1 384 321 0 0 chr5 164721246 164721352 -34908798 - MIR SINE MIR -58 150 45 247 290 112 14 chr5 164721400 164721686 -34908464 - L1ME4a LINE L1 -1 6120 5807 220 312 112 24 chr5 164721696 164721821 -34908329 - L2 LINE L2 -243 3070 2935 412 322 0 16 chr5 164721862 164721983 -34908167 - MIR SINE MIR -67 141 23 560 261 113 39 chr5 164722688 164722918 -34907232 + MIR SINE MIR 16 262 0 183 80 0 0 chr5 164722968 164722993 -34907157 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 1753 132 84 34 chr5 164723086 164723443 -34906707 - THE1C LTR MaLR 0 375 1 408 242 176 53 chr5 164723492 164723851 -34906299 - L2 LINE L2 -83 3230 2828 631 283 90 9 chr5 164724543 164724766 -34905384 - MIR SINE MIR -1 261 21 872 243 50 19 chr5 164724788 164725109 -34905041 + MER113 DNA MER1_type? 117 447 -74 949 246 163 30 chr5 164725121 164725482 -34904668 + MLT1I LTR MaLR 1 409 0 773 282 13 13 chr5 164725776 164726003 -34904147 + MIR SINE MIR 36 262 0 217 275 202 23 chr5 164726013 164726231 -34903919 + L2 LINE L2 2985 3241 -31 1257 169 30 117 chr5 164726431 164726857 -34903293 - MLT1C LTR MaLR -3 464 76 1606 158 14 0 chr5 164726859 164727137 -34903013 - Tigger3(Golem) DNA MER2_type -2 3027 2746 510 216 20 68 chr5 164727156 164727304 -34902846 + FLAM_A SINE Alu 2 142 0 1118 116 6 0 chr5 164727308 164727472 -34902678 - Tigger3(Golem) DNA MER2_type -283 2746 2582 1588 175 0 76 chr5 164727473 164727787 -34902363 - AluJo SINE Alu -22 290 1 894 154 0 0 chr5 164727787 164727917 -34902233 - AluJb SINE Alu -177 135 6 262 44 0 67 chr5 164727926 164727971 -34902179 - Tigger3(Golem) DNA MER2_type -2691 338 297 1452 178 65 17 chr5 164728007 164728300 -34901850 - Tigger3(Golem) DNA MER2_type -2722 307 1 295 203 43 0 chr5 164728305 164728374 -34901776 - MLT1C LTR MaLR -395 72 1 1636 70 25 0 chr5 164730005 164730206 -34899944 + AluSq SINE Alu 90 295 -18 1160 264 50 19 chr5 164730218 164730256 -34899894 + MER113 DNA MER1_type? 88 123 -398 1878 98 112 7 chr5 164730256 164730533 -34899617 - AluSg1 SINE Alu -3 306 1 1160 264 50 19 chr5 164730533 164730915 -34899235 + MER113 DNA MER1_type? 123 521 0 200 214 71 0 chr5 164731815 164731857 -34898293 + MIR SINE MIR 133 177 -85 283 301 48 0 chr5 164731930 164732012 -34898138 + MIR SINE MIR 32 117 -145 350 250 171 14 chr5 164732012 164732152 -34897998 + MER91A DNA MER1_type 1 162 -34 256 211 35 0 chr5 164732235 164732292 -34897858 + MER91A DNA MER1_type 132 190 0 245 211 0 19 chr5 164732293 164732345 -34897805 + MIR3 SINE MIR 112 162 -46 442 204 43 0 chr5 164732905 164732998 -34897152 - MIR3 SINE MIR -30 178 82 2566 66 0 22 chr5 164733495 164733812 -34896338 + AluSg SINE Alu 1 310 0 203 156 0 0 chr5 164734529 164734561 -34895589 + GA-rich Low_complexity Low_complexity 2 33 0 375 78 0 0 chr5 164734866 164734917 -34895233 + (TAA)n Simple_repeat Simple_repeat 2 52 0 407 293 45 45 chr5 164734925 164735082 -34895068 - MIR SINE MIR -6 256 100 253 88 0 0 chr5 164735543 164735577 -34894573 + MIR SINE MIR 113 146 -62 289 297 79 0 chr5 164735713 164735814 -34894336 + MIR SINE MIR 132 240 -22 189 348 25 17 chr5 164735844 164735962 -34894188 - MIR SINE MIR -48 214 96 348 207 76 55 chr5 164736274 164736424 -34893726 - MIR3 SINE MIR -4 204 47 224 300 0 0 chr5 164736689 164736749 -34893401 - MIR SINE MIR -113 149 90 192 77 0 0 chr5 164737042 164737068 -34893082 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 236 53 26 0 chr5 164737243 164737281 -34892869 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2109 122 7 0 chr5 164737285 164737572 -34892578 - AluSx SINE Alu -23 289 1 809 202 56 25 chr5 164737770 164737968 -34892182 + MIR SINE MIR 3 206 -56 200 359 85 28 chr5 164738124 164738372 -34891778 - L3 LINE CR1 -12 1565 1304 336 207 18 117 chr5 164738514 164738625 -34891525 - L3 LINE CR1 -496 1081 982 253 342 50 8 chr5 164738896 164739016 -34891134 - MIR3 SINE MIR -70 138 14 209 267 198 30 chr5 164739447 164739548 -34890602 + MIR3 SINE MIR 37 154 -54 613 289 11 6 chr5 164739850 164740030 -34890120 - MIR SINE MIR -6 256 76 1021 125 0 0 chr5 164740348 164740484 -34889666 - FAM SINE Alu -18 167 32 630 323 20 31 chr5 164741030 164741284 -34888866 + MIR SINE MIR 12 262 0 2398 99 0 3 chr5 164741630 164741943 -34888207 + AluSx SINE Alu 1 312 0 369 261 81 31 chr5 164743654 164743815 -34886335 - MER5A DNA MER1_type -6 172 4 200 189 75 38 chr5 164743871 164743924 -34886226 - MIR3 SINE MIR -50 158 104 507 235 45 0 chr5 164744122 164744254 -34885896 - MIR3 SINE MIR -58 150 13 422 169 22 51 chr5 164744773 164744951 -34885199 + CT-rich Low_complexity Low_complexity 3 175 0 731 125 5 49 chr5 164744955 164745139 -34885011 + (TCTCC)n Simple_repeat Simple_repeat 3 178 0 482 170 18 53 chr5 164745141 164745312 -34884838 + CT-rich Low_complexity Low_complexity 3 167 0 390 361 28 6 chr5 164747124 164747304 -34882846 - MIR SINE MIR 0 262 79 184 241 72 60 chr5 164747582 164747665 -34882485 - MIR3 SINE MIR -21 187 104 342 0 0 0 chr5 164748800 164748838 -34881312 + (TCC)n Simple_repeat Simple_repeat 1 38 0 199 298 0 71 chr5 164749458 164749542 -34880608 + MIR SINE MIR 184 261 -1 680 276 43 9 chr5 164749852 164750062 -34880088 - Charlie8 DNA MER1_type -2198 219 3 356 237 53 53 chr5 164750655 164750786 -34879364 + MIR SINE MIR 17 147 -115 239 163 0 0 chr5 164751055 164751098 -34879052 - Alu SINE Alu -259 43 1 611 289 32 39 chr5 164751256 164751536 -34878614 - L1ME3A LINE L1 -213 5957 5680 305 306 32 22 chr5 164751616 164751864 -34878286 - L1ME3A LINE L1 -644 5526 5274 304 394 0 0 chr5 164751879 164752006 -34878144 - L1ME3A LINE L1 -914 5232 5106 422 313 19 19 chr5 164752081 164752241 -34877909 + MIR SINE MIR 23 182 -80 414 69 0 0 chr5 164753224 164753282 -34876868 + (CA)n Simple_repeat Simple_repeat 1 58 0 2157 126 7 3 chr5 164753796 164754098 -34876052 + AluSx SINE Alu 3 305 -7 2243 103 10 0 chr5 164754103 164754393 -34875757 + AluSq SINE Alu 1 293 -20 291 333 72 20 chr5 164754699 164754852 -34875298 + MIR SINE MIR 46 206 -56 300 353 43 0 chr5 164754872 164754988 -34875162 - MIR SINE MIR -56 152 32 349 260 70 0 chr5 164755386 164755486 -34874664 + L2 LINE L2 3201 3307 -6 2079 123 0 7 chr5 164755486 164755804 -34874346 + AluSx SINE Alu 1 316 0 253 239 14 14 chr5 164756058 164756129 -34874021 - L2 LINE L2 -20 3252 3182 494 287 63 7 chr5 164756165 164756308 -34873842 + MIR SINE MIR 12 162 -100 1694 110 4 59 chr5 164756401 164756656 -34873494 + AluSg SINE Alu 57 297 -13 210 163 23 0 chr5 164756759 164756802 -34873348 + (TTG)n Simple_repeat Simple_repeat 2 45 0 981 263 19 29 chr5 164757152 164757464 -34872686 - L1ME LINE L1 -492 5678 5370 294 140 18 0 chr5 164757494 164757551 -34872599 + L1MA10 LINE L1 6269 6326 -8 381 22 0 0 chr5 164757552 164757598 -34872552 + (CA)n Simple_repeat Simple_repeat 2 47 0 314 287 17 35 chr5 164757736 164757851 -34872299 + MIR3 SINE MIR 11 123 -85 769 251 49 53 chr5 164758571 164758636 -34871514 - MIR SINE MIR -6 256 192 2284 124 0 0 chr5 164758636 164758935 -34871215 - AluSx SINE Alu -13 299 1 769 251 49 53 chr5 164758935 164759112 -34871038 - MIR SINE MIR -70 192 15 215 271 24 47 chr5 164759376 164759461 -34870689 - L2 LINE L2 -311 3002 2920 1971 142 10 0 chr5 164759542 164759831 -34870319 - AluJo SINE Alu -14 298 7 21 0 0 0 chr5 164761144 164761165 -34868985 + AT_rich Low_complexity Low_complexity 1 21 0 473 257 44 22 chr5 164761197 164761333 -34868817 + MIR SINE MIR 14 152 -110 296 366 101 8 chr5 164761513 164761781 -34868369 + L2 LINE L2 2942 3234 -38 328 243 0 0 chr5 164762618 164762692 -34867458 - MIR SINE MIR 0 262 189 543 227 17 8 chr5 164762694 164762813 -34867337 + L2 LINE L2 3153 3272 0 468 285 62 14 chr5 164762822 164762966 -34867184 - MIR SINE MIR -111 151 1 325 184 66 0 chr5 164762988 164763064 -34867086 + MER5A DNA MER1_type 26 106 -83 660 247 32 16 chr5 164764361 164764551 -34865599 - MIR3 SINE MIR -10 198 6 865 113 0 0 chr5 164764580 164764721 -34865429 + L1PA14 LINE L1 6020 6160 -1 2194 136 0 0 chr5 164764808 164765103 -34865047 + AluSx SINE Alu 1 295 -17 358 221 39 0 chr5 164765581 164765658 -34864492 - MIR3 SINE MIR -17 191 112 341 204 61 20 chr5 164766273 164766371 -34863779 - MIR SINE MIR -66 142 41 1602 230 34 44 chr5 164766932 164767405 -34862745 - MER113 DNA MER1_type? -53 468 1 307 232 63 32 chr5 164767564 164767659 -34862491 - MIR3 SINE MIR -3 205 108 578 273 157 29 chr5 164770123 164770629 -34859521 - L2 LINE L2 -2 3311 2725 388 257 37 0 chr5 164770861 164770970 -34859180 - MIR3 SINE MIR -87 121 9 491 232 43 70 chr5 164771423 164771457 -34858693 + MIR SINE MIR 11 44 -218 908 204 17 0 chr5 164771457 164771629 -34858521 + MER45A DNA AcHobo 1 175 -3 491 232 43 70 chr5 164771629 164771779 -34858371 + MIR SINE MIR 44 190 -72 523 250 214 5 chr5 164772901 164773097 -34857053 + MIR SINE MIR 20 256 -6 227 219 358 15 chr5 164773354 164773491 -34856659 + MIR SINE MIR 35 218 -44 29 0 0 0 chr5 164774227 164774256 -34855894 + AT_rich Low_complexity Low_complexity 1 29 0 4251 36 0 0 chr5 164774256 164774751 -34855399 - L1PA5 LINE L1 -12 6142 5648 561 331 106 57 chr5 164775349 164775450 -34854700 + L2 LINE L2 2866 2961 -311 2263 111 3 0 chr5 164775450 164775756 -34854394 - AluSx SINE Alu -5 307 1 561 331 106 57 chr5 164775756 164776041 -34854109 + L2 LINE L2 2961 3271 -1 375 233 43 43 chr5 164776958 164777074 -34853076 + MIR SINE MIR 4 119 -89 1066 210 97 0 chr5 164777151 164777389 -34852761 + MIR SINE MIR 2 262 0 361 324 69 0 chr5 164778185 164778358 -34851792 - MER117 DNA MER1_type -7 190 6 288 274 56 12 chr5 164778426 164778565 -34851585 + MIR3 SINE MIR 64 197 -27 892 253 45 20 chr5 164778596 164778841 -34851309 - MIR SINE MIR 0 262 12 263 250 107 64 chr5 164778896 164779036 -34851114 + MIR SINE MIR 38 183 -79 198 0 0 0 chr5 164779767 164779789 -34850361 + (CAG)n Simple_repeat Simple_repeat 2 23 0 297 302 85 0 chr5 164779789 164779895 -34850255 - MIR SINE MIR -14 248 134 * 773 328 86 15 chr5 164779892 164780298 -34849852 + L2 LINE L2 2878 3312 -1 477 190 40 0 chr5 164780294 164780394 -34849756 - MIR SINE MIR -125 137 34 * 501 263 146 24 chr5 164780570 164780783 -34849367 + MIR SINE MIR 17 255 -7 461 312 171 16 chr5 164781293 164781674 -34848476 + L3 LINE CR1 1101 1540 -37 372 288 38 38 chr5 164781689 164781821 -34848329 + MIR SINE MIR 20 151 -111 418 336 67 0 chr5 164782041 164782190 -34847960 - MIR SINE MIR -63 199 41 230 254 16 0 chr5 164782298 164782361 -34847789 + MIR SINE MIR 103 166 -96 519 215 29 44 chr5 164783099 164783304 -34846846 + MER113 DNA MER1_type? 35 236 -285 194 328 16 0 chr5 164783627 164783688 -34846462 - L2 LINE L2 -14 3258 3197 478 254 33 13 chr5 164783823 164783974 -34846176 + MIR SINE MIR 38 192 -63 465 299 11 17 chr5 164784288 164784465 -34845685 + L1MC4a LINE L1 5734 5909 -1899 2112 112 0 0 chr5 164784807 164785143 -34845007 + AluSx SINE Alu 1 336 0 1731 181 10 7 chr5 164785148 164785458 -34844692 + AluJb SINE Alu 1 311 -1 23 68 0 0 chr5 164785481 164785525 -34844625 + AT_rich Low_complexity Low_complexity 1 44 0 2255 109 0 6 chr5 164785596 164785909 -34844241 + AluSx SINE Alu 1 311 -1 2351 73 0 10 chr5 164786084 164786386 -34843764 + AluY SINE Alu 1 299 -12 236 264 14 0 chr5 164786445 164786517 -34843633 + LTR16A1 LTR ERVL 20 92 -365 * 276 160 0 0 chr5 164786515 164786565 -34843585 + LTR16A1 LTR ERVL 406 455 -2 681 297 95 0 chr5 164787599 164787821 -34842329 + MIR SINE MIR 8 250 -12 976 274 24 4 chr5 164788567 164788819 -34841331 - MIR SINE MIR -1 261 5 529 253 92 29 chr5 164788991 164789165 -34840985 - MIR SINE MIR -73 189 5 620 201 6 3 chr5 164789241 164789592 -34840558 + (CA)n Simple_repeat Simple_repeat 1 352 0 254 276 51 77 chr5 164789646 164789802 -34840348 - MIR3 SINE MIR -39 169 18 246 208 0 0 chr5 164789963 164790002 -34840148 - MIR3 SINE MIR -19 189 151 344 324 27 27 chr5 164790002 164790150 -34840000 + MER5A DNA MER1_type 4 151 -38 242 303 34 11 chr5 164790161 164790250 -34839900 - MIR SINE MIR -77 131 41 389 234 138 0 chr5 164791475 164791569 -34838581 + L2 LINE L2 3201 3307 -6 2145 118 23 0 chr5 164791569 164791874 -34838276 + AluSx SINE Alu 1 312 0 250 291 181 22 chr5 164792186 164792325 -34837825 - MIR SINE MIR -55 153 21 818 262 44 4 chr5 164792391 164792616 -34837534 - MIR SINE MIR -28 234 1 626 102 0 51 chr5 164792878 164792976 -34837174 - AluSg SINE Alu -193 117 25 952 259 167 12 chr5 164792993 164793489 -34836661 + L2 LINE L2 2690 3267 -46 343 280 0 0 chr5 164793479 164793554 -34836596 - MIR SINE MIR -143 119 45 * 1840 135 0 24 chr5 164793591 164793888 -34836262 - AluJb SINE Alu -22 290 1 1301 129 5 28 chr5 164794259 164794476 -34835674 - AluJb SINE Alu -100 212 1 264 265 118 20 chr5 164795023 164795125 -34835025 + MER5A DNA MER1_type 49 160 -29 470 216 201 0 chr5 164796637 164796776 -34833374 - MER5A DNA MER1_type -6 183 17 341 215 89 0 chr5 164796792 164796871 -34833279 + MER5B DNA MER1_type 1 86 -92 538 331 89 20 chr5 164796919 164797105 -34833045 - L2 LINE L2 -20 3293 3121 2282 103 0 22 chr5 164797105 164797424 -34832726 + AluSq SINE Alu 1 312 -1 538 331 89 20 chr5 164797424 164797587 -34832563 - L2 LINE L2 -192 3121 2920 231 269 86 0 chr5 164798305 164798398 -34831752 - L1MC4a LINE L1 -1632 6176 6076 1326 268 42 31 chr5 164798494 164799035 -34831115 - L1MC4a LINE L1 -1900 5908 5362 508 286 30 0 chr5 164799116 164799284 -34830866 - Charlie8 DNA MER1_type -2212 205 33 228 361 46 28 chr5 164799445 164799553 -34830597 - MER5A DNA MER1_type -6 183 74 * 254 314 0 23 chr5 164799511 164799597 -34830553 - MIR SINE MIR -78 130 47 2117 243 86 48 chr5 164800176 164800934 -34829216 - MER21B LTR ERV1 -58 805 19 393 228 0 0 chr5 164800956 164801035 -34829115 - MER21B LTR ERV1 -773 90 12 220 365 55 22 chr5 164801039 164801220 -34828930 + L2 LINE L2 3121 3307 -6 257 286 143 9 chr5 164801508 164801613 -34828537 + L2 LINE L2 3153 3271 -1 363 236 25 99 chr5 164801709 164801770 -34828380 + MER5B DNA MER1_type 1 65 -113 1683 168 57 0 chr5 164801770 164802050 -34828100 + AluJo SINE Alu 1 296 -16 363 236 25 99 chr5 164802050 164802149 -34828001 + MER5B DNA MER1_type 65 149 -29 345 228 26 0 chr5 164802644 164802725 -34827425 - MIR SINE MIR -54 154 112 583 322 84 5 chr5 164802801 164803015 -34827135 + MIR SINE MIR 1 231 -31 213 311 74 15 chr5 164803758 164803893 -34826257 + MIR3 SINE MIR 20 162 -46 809 232 130 0 chr5 164803935 164804120 -34826030 + MER3 DNA MER1_type 1 209 0 656 270 74 26 chr5 164804123 164804353 -34825797 + MIR SINE MIR 8 248 -14 297 254 197 11 chr5 164804812 164804945 -34825205 + MIR SINE MIR 25 182 -65 314 258 50 25 chr5 164807390 164807510 -34822640 + MIR SINE MIR 27 149 -59 535 318 120 48 chr5 164807666 164808065 -34822085 - L3 LINE CR1 -118 1459 1032 204 283 0 0 chr5 164808104 164808157 -34821993 + L2 LINE L2 2925 2977 -337 1091 172 0 21 chr5 164808184 164808370 -34821780 - FRAM SINE Alu -3 173 1 338 291 101 64 chr5 164808377 164808673 -34821477 + L2 LINE L2 3004 3310 -3 200 128 0 21 chr5 164808954 164809001 -34821149 + (CAGAGA)n Simple_repeat Simple_repeat 2 47 0 180 152 0 0 chr5 164809112 164809145 -34821005 + (TG)n Simple_repeat Simple_repeat 1 33 0 258 81 0 0 chr5 164809303 164809340 -34820810 + (GGGA)n Simple_repeat Simple_repeat 2 38 0 206 280 96 121 chr5 164809550 164809707 -34820443 + MIR3 SINE MIR 55 207 -1 391 304 0 0 chr5 164809783 164809885 -34820265 - MIR SINE MIR -108 154 53 253 311 0 0 chr5 164810042 164810103 -34820047 + MIR SINE MIR 90 150 -58 212 119 0 24 chr5 164810568 164810610 -34819540 + (TC)n Simple_repeat Simple_repeat 1 41 0 278 301 228 7 chr5 164811711 164811847 -34818303 - MIR SINE MIR -19 243 78 360 0 0 0 chr5 164812760 164812800 -34817350 + (TG)n Simple_repeat Simple_repeat 1 40 0 479 311 90 12 chr5 164813914 164814081 -34816069 + L3 LINE CR1 1397 1576 -1 198 0 0 0 chr5 164815191 164815213 -34814937 + (T)n Simple_repeat Simple_repeat 1 22 0 189 0 0 0 chr5 164815502 164815523 -34814627 + (A)n Simple_repeat Simple_repeat 1 21 0 403 320 23 84 chr5 164815704 164815765 -34814385 + MIR SINE MIR 19 82 -176 271 0 25 25 chr5 164815765 164815805 -34814345 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1945 131 3 3 chr5 164815807 164816089 -34814061 - AluSx SINE Alu -30 282 1 403 320 23 84 chr5 164816089 164816245 -34813905 + MIR SINE MIR 83 221 -37 276 233 41 0 chr5 164816720 164816793 -34813357 + GA-rich Low_complexity Low_complexity 2 77 0 607 233 131 0 chr5 164817171 164817347 -34812803 + MIR SINE MIR 63 261 -1 267 277 178 61 chr5 164817620 164817833 -34812317 + L3 LINE CR1 965 1202 -375 364 303 5 49 chr5 164817934 164818119 -34812031 + CT-rich Low_complexity Low_complexity 1 177 0 191 111 0 28 chr5 164818208 164818244 -34811906 + (GAA)n Simple_repeat Simple_repeat 3 37 0 270 310 150 0 chr5 164820915 164821028 -34809122 - MIR3 SINE MIR -15 193 64 229 197 66 16 chr5 164821260 164821321 -34808829 - MIR SINE MIR -115 147 84 380 270 30 0 chr5 164821760 164821860 -34808290 - MIR SINE MIR -63 145 43 665 279 50 0 chr5 164823567 164823746 -34806404 - MIR SINE MIR -28 234 47 810 262 52 16 chr5 164823760 164824008 -34806142 - MIR SINE MIR 0 262 6 324 353 73 35 chr5 164824036 164824322 -34805828 + L2 LINE L2 2976 3272 0 342 336 34 40 chr5 164824336 164824485 -34805665 - MIR3 SINE MIR -15 193 46 192 266 62 0 chr5 164824549 164824613 -34805537 + MIR3 SINE MIR 116 183 -25 457 317 25 11 chr5 164825038 164825212 -34804938 - MIR SINE MIR -49 159 24 297 229 0 0 chr5 164826252 164826313 -34803837 - MIR SINE MIR -66 142 82 385 379 21 0 chr5 164826438 164826583 -34803567 - MIR SINE MIR -48 214 67 286 309 64 0 chr5 164826663 164826773 -34803377 - MIR3 SINE MIR -11 197 81 328 319 30 96 chr5 164827129 164827430 -34802720 - L1M4 LINE L1 -2781 3365 3085 22 35 0 0 chr5 164827879 164827908 -34802242 + GC_rich Low_complexity Low_complexity 1 29 0 386 254 43 36 chr5 164828622 164828760 -34801390 - MIR3 SINE MIR 0 208 70 281 184 184 64 chr5 164828954 164829063 -34801087 + L2 LINE L2 3192 3313 0 500 287 48 29 chr5 164829243 164829452 -34800698 - Charlie8 DNA MER1_type -2204 213 1 337 256 101 16 chr5 164829499 164829628 -34800522 + MER103 DNA DNA 24 163 -3 600 251 196 14 chr5 164830266 164830485 -34799665 + MIR SINE MIR 3 261 -1 320 306 0 10 chr5 164830487 164830585 -34799565 + L3 LINE CR1 1293 1389 -188 302 402 11 26 chr5 164831323 164831512 -34798638 + L3 LINE CR1 1390 1575 -2 225 94 0 0 chr5 164831606 164831638 -34798512 + (TG)n Simple_repeat Simple_repeat 2 33 0 182 412 0 0 chr5 164832646 164832714 -34797436 - L3b LINE CR1 -130 1453 1386 204 97 0 0 chr5 164833610 164833641 -34796509 + (CA)n Simple_repeat Simple_repeat 1 31 0 574 187 60 187 chr5 164833797 164834081 -34796069 + MIR SINE MIR 15 262 0 26 0 0 0 chr5 164834399 164834425 -34795725 + AT_rich Low_complexity Low_complexity 1 26 0 815 234 23 37 chr5 164834469 164834687 -34795463 - MIR SINE MIR -1 261 47 191 386 23 0 chr5 164835437 164835525 -34794625 + L2 LINE L2 2969 3058 -214 204 266 37 83 chr5 164835589 164835698 -34794452 + L2 LINE L2 3202 3305 -8 342 275 202 28 chr5 164835825 164836003 -34794147 + MIR SINE MIR 53 261 -1 1019 251 119 46 chr5 164836260 164836655 -34793495 + MLT1K LTR MaLR 160 583 -5 406 283 42 0 chr5 164836705 164836825 -34793325 - L2 LINE L2 0 3272 3148 229 289 36 12 chr5 164837427 164837510 -34792640 + L2 LINE L2 3185 3269 -3 2159 101 0 57 chr5 164837519 164837835 -34792315 - AluSx SINE Alu -14 298 1 2613 234 99 79 chr5 164837877 164838551 -34791599 + MER69B DNA AcHobo 3 662 -1864 2252 126 0 7 chr5 164838551 164838860 -34791290 - AluSx SINE Alu -3 309 3 2613 234 99 79 chr5 164838860 164838896 -34791254 + MER69B DNA AcHobo 662 696 -1830 1945 158 51 70 chr5 164838896 164839370 -34790780 + MLT1C LTR MaLR 1 465 -2 2613 234 99 79 chr5 164839370 164839579 -34790571 + MER69B DNA AcHobo 696 941 -285 288 91 0 0 chr5 164839981 164840025 -34790125 + (TCC)n Simple_repeat Simple_repeat 2 45 0 473 287 0 0 chr5 164840175 164840297 -34789853 + MLT1A1 LTR MaLR 176 297 -68 2479 95 0 0 chr5 164840297 164840602 -34789548 + AluSx SINE Alu 1 305 -7 1277 140 0 0 chr5 164840603 164840781 -34789369 + AluSg/x SINE Alu 132 309 -1 361 100 114 0 chr5 164840783 164840853 -34789297 + MLT1A1 LTR MaLR 288 365 0 204 308 44 11 chr5 164841069 164841160 -34788990 + MIR3 SINE MIR 92 185 -23 2291 84 0 49 chr5 164841637 164842004 -34788146 - L1PA8 LINE L1 -2 6170 5822 1717 60 18 88 chr5 164842004 164842156 -34787994 + L1PA8A LINE L1 5523 5647 -484 2267 106 14 0 chr5 164842156 164842448 -34787702 + AluSx SINE Alu 1 296 -16 1717 60 18 88 chr5 164842448 164842579 -34787571 + L1PA8A LINE L1 5647 5786 -345 1045 170 33 9 chr5 164842711 164842923 -34787227 + MER33 DNA MER1_type 1 217 -107 1705 169 14 17 chr5 164842923 164842942 -34787208 - AluJb SINE Alu -13 299 281 213 65 0 0 chr5 164842942 164842973 -34787177 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1705 169 14 17 chr5 164842973 164843243 -34786907 - AluJb SINE Alu -31 281 11 2077 100 38 7 chr5 164843269 164843560 -34786590 - AluSg SINE Alu -10 300 1 2224 110 0 35 chr5 164843560 164843877 -34786273 - AluSq SINE Alu -6 307 1 695 154 0 0 chr5 164843944 164844048 -34786102 - AluJb SINE Alu -207 105 2 1814 179 6 19 chr5 164844050 164844363 -34785787 - AluJo SINE Alu -3 309 1 450 156 0 0 chr5 164844363 164844459 -34785691 + MER33 DNA MER1_type 249 344 -19 1608 93 0 5 chr5 164844459 164844663 -34785487 - AluSg/x SINE Alu -12 298 96 811 205 23 6 chr5 164844763 164844934 -34785216 - MLT1A1 LTR MaLR -191 174 1 1904 174 3 3 chr5 164845314 164845612 -34784538 - AluJo SINE Alu -14 298 1 350 205 0 3 chr5 164845612 164845706 -34784444 - MIR SINE MIR -67 141 56 702 297 65 4 chr5 164846445 164846674 -34783476 - MIR SINE MIR 0 262 20 2332 112 0 3 chr5 164846697 164847010 -34783140 - AluSx SINE Alu 0 312 1 186 271 0 0 chr5 164847234 164847282 -34782868 - L2 LINE L2 -1889 1425 1378 278 298 24 40 chr5 164847611 164847735 -34782415 - MIR SINE MIR -75 187 66 408 94 47 0 chr5 164847777 164847841 -34782309 - Alu SINE Alu -18 292 226 1322 71 0 0 chr5 164847844 164847998 -34782152 - AluSq SINE Alu -159 154 1 476 223 74 84 chr5 164847998 164848213 -34781937 - MIR SINE MIR -1 261 49 886 132 0 0 chr5 164848583 164848704 -34781446 + AluJo/FLAM SINE Alu 1 121 -191 2524 80 0 0 chr5 164848704 164849005 -34781145 - AluSq SINE Alu -12 301 1 1783 183 0 16 chr5 164849010 164849316 -34780834 - AluJo SINE Alu -11 301 1 316 267 0 23 chr5 164849430 164849516 -34780634 - HERV16 LTR ERVL -3545 1451 1368 1754 150 24 21 chr5 164849529 164849863 -34780287 + MER44D DNA MER2_type 5 609 0 256 89 54 0 chr5 164849881 164849937 -34780213 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 189 107 0 0 chr5 164850251 164850279 -34779871 + (TCTG)n Simple_repeat Simple_repeat 3 30 0 2340 110 0 7 chr5 164850503 164850813 -34779337 - AluSg1 SINE Alu -1 308 1 25 0 0 0 chr5 164851093 164851118 -34779032 + AT_rich Low_complexity Low_complexity 1 25 0 893 239 28 14 chr5 164851118 164851336 -34778814 + MIR SINE MIR 21 241 -21 1608 171 75 6 chr5 164851345 164851667 -34778483 + MER2 DNA MER2_type 1 344 0 1724 114 64 36 chr5 164851714 164851994 -34778156 - AluJb SINE Alu 0 312 25 878 203 0 23 chr5 164851999 164852176 -34777974 - FRAM SINE Alu -5 171 1 485 357 52 8 chr5 164852177 164852429 -34777721 + L2 LINE L2 3010 3272 0 241 348 0 0 chr5 164852578 164852647 -34777503 - L2 LINE L2 -63 3209 3141 987 172 13 0 chr5 164852848 164853005 -34777145 - AluJb SINE Alu -8 304 146 1562 174 20 0 chr5 164853050 164853297 -34776853 + AluJb SINE Alu 46 297 -15 2402 83 0 13 chr5 164853299 164853600 -34776550 + AluSx SINE Alu 2 298 -14 2078 88 44 4 chr5 164853602 164853720 -34776430 + AluSq SINE Alu 3 115 -196 226 0 59 0 chr5 164853720 164853754 -34776396 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 2078 88 44 4 chr5 164853754 164853933 -34776217 + AluSq SINE Alu 115 311 0 222 194 69 42 chr5 164854273 164854345 -34775805 + MIR SINE MIR 46 119 -89 1974 136 0 63 chr5 164854673 164854989 -34775161 - AluJb SINE Alu -16 296 1 439 244 26 0 chr5 164855615 164855730 -34774420 - MIR SINE MIR -62 146 29 292 257 193 0 chr5 164855884 164855993 -34774157 + MIR SINE MIR 19 148 -114 433 284 60 27 chr5 164856463 164856646 -34773504 + MIR3 SINE MIR 15 203 -5 594 202 0 0 chr5 164856791 164856890 -34773260 + AluJ/FLAM SINE Alu 3 101 -211 353 221 39 71 chr5 164857798 164857952 -34772198 + MER113 DNA MER1_type? 3 151 -370 1004 124 0 14 chr5 164858653 164858798 -34771352 - FLAM_C SINE Alu 0 143 1 219 36 0 0 chr5 164859003 164859031 -34771119 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 2227 118 10 0 chr5 164859047 164859351 -34770799 - AluSx SINE Alu -5 307 1 657 297 127 28 chr5 164859351 164859775 -34770375 - L2 LINE L2 -13 3300 2835 666 168 73 37 chr5 164859780 164859863 -34770287 + MER45A DNA AcHobo 1 80 -1501 2245 116 0 6 chr5 164859863 164860174 -34769976 - AluSx SINE Alu -3 309 1 666 168 73 37 chr5 164860174 164860257 -34769893 + MER45A DNA AcHobo 80 178 0 1394 73 0 0 chr5 164860712 164860877 -34769273 + AluY SINE Alu 115 279 -32 200 184 0 0 chr5 164860896 164860934 -34769216 + GA-rich Low_complexity Low_complexity 2 39 0 187 216 14 122 chr5 164860965 164861039 -34769111 - MIR SINE MIR -80 182 117 2432 57 0 0 chr5 164861877 164862188 -34767962 + AluY SINE Alu 2 312 0 426 263 179 6 chr5 164862690 164862869 -34767281 + MIR SINE MIR 21 230 -32 2296 83 3 14 chr5 164862873 164863188 -34766962 - AluSq SINE Alu 0 312 1 447 63 0 0 chr5 164863252 164863315 -34766835 + (TC)n Simple_repeat Simple_repeat 2 64 0 369 0 0 0 chr5 164863315 164863356 -34766794 + (CA)n Simple_repeat Simple_repeat 1 41 0 256 346 62 38 chr5 164864090 164864379 -34765771 + L3 LINE CR1 1274 1569 -8 190 237 0 0 chr5 164864639 164864677 -34765473 + MIR3 SINE MIR 161 198 -10 466 286 126 42 chr5 164864705 164864854 -34765296 + L1ME4a LINE L1 5620 5755 -366 2288 109 0 0 chr5 164864854 164865147 -34765003 + AluSx SINE Alu 1 293 -19 466 286 126 42 chr5 164865147 164865402 -34764748 + L1ME4a LINE L1 5755 6058 -63 262 237 246 8 chr5 164865430 164865548 -34764602 + MIR3 SINE MIR 55 200 -8 248 252 39 83 chr5 164865643 164865823 -34764327 - L2 LINE L2 -179 3093 2898 1304 174 16 53 chr5 164866212 164866491 -34763659 + L1MC1 LINE L1 5923 6192 -141 1474 187 50 7 chr5 164866491 164866774 -34763376 + AluJo SINE Alu 1 295 -17 1304 174 16 53 chr5 164866774 164866798 -34763352 + L1MC1 LINE L1 6192 6215 -118 816 247 139 87 chr5 164866901 164867150 -34763000 - L2 LINE L2 -1267 2047 1812 2154 125 0 0 chr5 164867150 164867479 -34762671 - AluSc SINE Alu 0 329 1 1923 107 90 14 chr5 164867488 164867778 -34762372 - AluSx SINE Alu 0 312 1 788 153 0 0 chr5 164867782 164867906 -34762244 - FLAM_C SINE Alu -7 126 3 816 247 139 87 chr5 164867906 164868235 -34761915 - L2 LINE L2 -1511 1803 1421 313 233 217 8 chr5 164868255 164868384 -34761766 - MIR SINE MIR -79 183 28 194 179 54 36 chr5 164868618 164868674 -34761476 - MIR SINE MIR -132 130 74 2718 45 0 3 chr5 164869275 164869587 -34760563 + AluY SINE Alu 1 311 0 288 312 74 11 chr5 164869627 164869816 -34760334 - L2 LINE L2 -1257 2057 1857 832 129 0 0 chr5 164869970 164870086 -34760064 + AluJb SINE Alu 1 116 -196 337 207 12 37 chr5 164870328 164870410 -34759740 - MIR SINE MIR -181 81 2 243 286 59 42 chr5 164870574 164870693 -34759457 - L3 LINE CR1 -50 1527 1407 246 271 318 0 chr5 164870706 164870813 -34759337 + MIR SINE MIR 9 149 -113 1700 165 6 54 chr5 164870814 164870950 -34759200 + AluJo SINE Alu 1 142 -170 1942 44 151 4 chr5 164870950 164871202 -34758948 + AluY SINE Alu 1 289 -22 1700 165 6 54 chr5 164871202 164871381 -34758769 + AluJo SINE Alu 142 301 -11 2304 110 0 3 chr5 164871387 164871688 -34758462 + AluSq SINE Alu 1 300 -13 677 112 0 0 chr5 164871729 164871827 -34758323 + FRAM SINE Alu 69 166 -10 2235 99 17 0 chr5 164871921 164872214 -34757936 - AluSx SINE Alu -14 298 1 223 347 0 0 chr5 164872294 164872366 -34757784 - L3 LINE CR1 -199 1378 1307 1715 174 32 0 chr5 164872423 164872704 -34757446 - AluJb SINE Alu -12 300 11 2128 127 0 34 chr5 164872745 164873068 -34757082 - AluSx SINE Alu 0 312 1 842 232 53 68 chr5 164873349 164873560 -34756590 + MIR SINE MIR 2 210 -52 2207 111 7 10 chr5 164873560 164873867 -34756283 + AluSg SINE Alu 1 306 -4 842 232 53 68 chr5 164873867 164873918 -34756232 + MIR SINE MIR 210 260 -2 1067 163 42 50 chr5 164873928 164874034 -34756116 + MER33 DNA MER1_type 1 106 -2479 2366 89 7 0 chr5 164874034 164874326 -34755824 + AluSx SINE Alu 1 294 -18 1067 163 42 50 chr5 164874326 164874459 -34755691 + MER33 DNA MER1_type 106 238 -86 210 313 122 7 chr5 164874632 164874779 -34755371 - L2 LINE L2 -939 2375 2212 2418 97 0 0 chr5 164875478 164875776 -34754374 + AluSx SINE Alu 1 298 -14 211 277 0 31 chr5 164875922 164875987 -34754163 + L2 LINE L2 3185 3247 -25 252 294 54 43 chr5 164876564 164876656 -34753494 + MER5A DNA MER1_type 68 160 -29 1946 91 91 0 chr5 164876680 164876956 -34753194 - AluY SINE Alu -10 301 1 2121 116 3 0 chr5 164876956 164877248 -34752902 - AluSg SINE Alu -17 293 1 1961 108 23 43 chr5 164877248 164877553 -34752597 - AluSx SINE Alu -13 299 1 2425 63 0 7 chr5 164877597 164877899 -34752251 - AluSg SINE Alu -10 300 1 283 293 133 22 chr5 164878057 164878229 -34751921 + MIR3 SINE MIR 10 191 -63 35 54 0 0 chr5 164878924 164878980 -34751170 + GC_rich Low_complexity Low_complexity 1 56 0 306 248 25 25 chr5 164879226 164879347 -34750803 + G-rich Low_complexity Low_complexity 6 126 0 25 31 0 0 chr5 164879534 164879566 -34750584 + GC_rich Low_complexity Low_complexity 1 32 0 32 57 0 0 chr5 164879575 164879628 -34750522 + GC_rich Low_complexity Low_complexity 1 53 0 2020 120 0 0 chr5 164879775 164880058 -34750092 - AluSq SINE Alu -30 283 1 195 313 0 15 chr5 164880095 164880162 -34749988 + L2 LINE L2 3233 3298 -15 2618 178 30 39 chr5 164880295 164880959 -34749191 + L1MB3 LINE L1 5297 5954 -229 528 270 195 15 chr5 164881089 164881289 -34748861 + L3 LINE CR1 1340 1575 -2 435 351 52 0 chr5 164881498 164881652 -34748498 + MIR SINE MIR 56 217 -45 214 264 174 16 chr5 164881690 164881811 -34748339 - L2 LINE L2 -16 3297 3158 359 313 224 3 chr5 164882074 164882368 -34747782 - L2 LINE L2 -44 3269 2911 209 250 0 98 chr5 164882962 164883054 -34747096 - L2 LINE L2 -24 3289 3207 * 235 235 185 17 chr5 164883023 164883142 -34747008 - MER5A DNA MER1_type -50 139 1 754 221 0 0 chr5 164883452 164883583 -34746567 - FLAM_A SINE Alu -2 131 1 1569 129 45 100 chr5 164883629 164883940 -34746210 - AluSq SINE Alu -15 298 5 543 153 9 45 chr5 164884257 164884368 -34745782 - FLAM_A SINE Alu -1 141 35 1878 155 13 16 chr5 164884399 164884708 -34745442 + AluJb SINE Alu 1 308 -4 1342 155 0 14 chr5 164884719 164884932 -34745218 + AluJo SINE Alu 86 295 -17 320 300 0 29 chr5 164884947 164885087 -34745063 + L1MC5 LINE L1 7715 7850 -111 2299 92 0 0 chr5 164885263 164885557 -34744593 + AluY SINE Alu 1 294 -17 578 289 78 0 chr5 164885851 164886031 -34744119 - MER117 DNA MER1_type 0 197 4 346 238 98 16 chr5 164886258 164886387 -34743763 + MIR SINE MIR 44 146 -62 400 235 24 0 chr5 164886433 164886518 -34743632 - L2 LINE L2 0 3272 3186 434 281 132 18 chr5 164886757 164886924 -34743226 - MIR SINE MIR -73 189 4 302 337 49 19 chr5 164888022 164888227 -34741923 - L2 LINE L2 -156 3116 2906 288 263 150 0 chr5 164888361 164888441 -34741709 - L2 LINE L2 -20 3293 3202 208 209 119 30 chr5 164888535 164888602 -34741548 - L2 LINE L2 -305 2967 2895 2100 114 7 0 chr5 164888606 164888895 -34741255 - AluSx SINE Alu -21 291 1 811 165 0 0 chr5 164888926 164889047 -34741103 + AluJb SINE Alu 3 123 -189 583 291 146 35 chr5 164889067 164889410 -34740740 - L2 LINE L2 -445 2869 2489 275 289 67 10 chr5 164889755 164889859 -34740291 - MIR SINE MIR -66 142 33 287 330 101 11 chr5 164889972 164890160 -34739990 + MIR SINE MIR 8 212 -50 313 250 155 14 chr5 164891041 164891189 -34738961 - L2 LINE L2 -225 3088 2920 936 161 291 30 chr5 164891328 164891452 -34738698 - AluYa8 SINE Alu -10 290 200 207 0 0 0 chr5 164891452 164891475 -34738675 + (TG)n Simple_repeat Simple_repeat 2 24 0 936 161 291 30 chr5 164891475 164891580 -34738570 - AluYa8 SINE Alu -100 200 1 220 316 197 48 chr5 164892186 164892414 -34737736 - L2 LINE L2 -357 2957 2696 380 278 60 0 chr5 164895273 164895406 -34734744 - L2 LINE L2 -226 3046 2906 253 298 211 6 chr5 164895453 164895624 -34734526 + MIR SINE MIR 32 237 -25 559 219 25 0 chr5 164896064 164896224 -34733926 - L1M4 LINE L1 -3241 2905 2742 497 249 226 0 chr5 164896664 164896845 -34733305 - MLT1J LTR MaLR -217 294 73 758 309 52 0 chr5 164896871 164897101 -34733049 - MIR SINE MIR -18 244 3 2314 103 7 0 chr5 164898029 164898339 -34731811 + AluSq SINE Alu 1 312 -1 2248 82 0 23 chr5 164898966 164899271 -34730879 + AluSg SINE Alu 1 298 -12 236 327 198 0 chr5 164899564 164899726 -34730424 - L2 LINE L2 -83 3189 2996 1535 128 121 4 chr5 164900153 164900418 -34729732 + AluSx SINE Alu 1 296 -16 359 256 26 17 chr5 164900506 164900623 -34729527 - MLT1L LTR MaLR -489 126 9 308 198 93 0 chr5 164900629 164900715 -34729435 + Charlie8 DNA MER1_type 91 184 -2233 425 353 7 13 chr5 164901597 164901747 -34728403 + MIR SINE MIR 17 165 -97 285 345 58 0 chr5 164901830 164901967 -34728183 - MIR SINE MIR -62 146 16 214 296 66 72 chr5 164902296 164902448 -34727702 - L3 LINE CR1 -5 1572 1422 471 288 7 42 chr5 164902526 164902717 -34727433 - MIR SINE MIR -65 143 6 590 167 10 0 chr5 164903307 164903409 -34726741 + L1MA8 LINE L1 6175 6277 -14 355 319 7 47 chr5 164903539 164903718 -34726432 + MIR3 SINE MIR 7 175 -33 182 309 53 43 chr5 164903709 164903803 -34726347 - MER5B DNA MER1_type -57 121 27 * 211 303 131 0 chr5 164904219 164904318 -34725832 - MIR SINE MIR -55 153 42 575 248 170 42 chr5 164905161 164905585 -34724565 - L1MC5 LINE L1 -32 7929 7452 191 293 134 4 chr5 164905589 164905710 -34724440 + MER5A DNA MER1_type 26 164 -14 570 346 70 18 chr5 164906514 164906800 -34723350 + L3 LINE CR1 1277 1577 0 1814 111 46 4 chr5 164906899 164907179 -34722971 + AluSx SINE Alu 4 295 -17 849 136 0 8 chr5 164907200 164907318 -34722832 + FLAM_C SINE Alu 2 118 -15 246 105 0 0 chr5 164907332 164907370 -34722780 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 226 303 153 22 chr5 164907401 164907675 -34722475 - L1ME4a LINE L1 -58 6063 5754 180 310 0 17 chr5 164908777 164908835 -34721315 - MIR3 SINE MIR -147 61 5 190 260 249 48 chr5 164909043 164909397 -34720753 - L2 LINE L2 -52 3261 2837 386 353 73 10 chr5 164909949 164910153 -34719997 + MIR SINE MIR 46 262 0 229 347 82 68 chr5 164910485 164910632 -34719518 + MIR3 SINE MIR 53 201 -7 184 297 80 65 chr5 164911934 164911972 -34718178 - MER5A DNA MER1_type -22 167 131 1681 188 10 0 chr5 164911972 164912260 -34717890 + AluJo SINE Alu 1 291 -21 184 297 80 65 chr5 164912260 164912359 -34717791 - MER5A DNA MER1_type -58 131 28 201 325 48 12 chr5 164912561 164912644 -34717506 + MIR SINE MIR 56 141 -67 2230 98 7 3 chr5 164912875 164913181 -34716969 + AluSq SINE Alu 1 307 -6 525 301 74 6 chr5 164914013 164914189 -34715961 - MIR3 SINE MIR -2 206 19 294 316 93 29 chr5 164915135 164915196 -34714954 - MIR3 SINE MIR -24 184 128 1554 87 23 5 chr5 164915196 164915415 -34714735 + AluSg/x SINE Alu 79 301 -9 294 316 93 29 chr5 164915415 164915492 -34714658 - MIR3 SINE MIR -80 128 37 404 256 60 15 chr5 164915970 164916103 -34714047 - MER113 DNA MER1_type? -345 176 38 1946 148 3 0 chr5 164916164 164916462 -34713688 - AluJb SINE Alu -13 299 1 192 200 0 0 chr5 164916595 164916640 -34713510 + A-rich Low_complexity Low_complexity 1 45 0 267 290 40 32 chr5 164917818 164917942 -34712208 + MIR SINE MIR 127 251 -11 205 227 76 15 chr5 164918686 164918752 -34711398 - L2 LINE L2 -222 3050 2981 774 251 142 36 chr5 164919343 164919730 -34710420 + Charlie8 DNA MER1_type 91 518 -1899 218 326 53 8 chr5 164921099 164921231 -34708919 + (TGGA)n Simple_repeat Simple_repeat 1 138 0 2384 91 0 0 chr5 164921817 164922124 -34708026 + AluSx SINE Alu 1 307 -5 425 277 45 19 chr5 164922166 164922321 -34707829 + L3 LINE CR1 1402 1560 -17 293 319 52 0 chr5 164922350 164922457 -34707693 - MIR SINE MIR -59 149 37 474 313 41 45 chr5 164923698 164923944 -34706206 + L2 LINE L2 3014 3258 -14 241 242 0 110 chr5 164923962 164924000 -34706150 + MIR3 SINE MIR 91 115 -93 2212 100 13 10 chr5 164924000 164924311 -34705839 - AluSx SINE Alu 0 312 1 241 242 0 110 chr5 164924311 164924363 -34705787 + MIR3 SINE MIR 115 171 -37 300 287 35 2 chr5 164924651 164924768 -34705382 + MIR SINE MIR 31 149 -67 2058 66 44 7 chr5 164925981 164926283 -34703867 - AluY SINE Alu 0 312 1 189 239 35 26 chr5 164926592 164926669 -34703481 + MIR SINE MIR 66 145 -63 320 170 9 81 chr5 164927036 164927178 -34702972 + MSTD LTR MaLR 86 273 -123 2266 97 7 10 chr5 164927178 164927477 -34702673 + AluSx SINE Alu 1 298 -14 2468 90 0 0 chr5 164927485 164927784 -34702366 + AluSx SINE Alu 1 299 -13 1311 123 0 0 chr5 164927784 164927963 -34702187 + AluSg/x SINE Alu 132 310 0 476 106 82 0 chr5 164927973 164928004 -34702146 + MSTD LTR MaLR 305 332 -64 230 0 33 0 chr5 164928004 164928034 -34702116 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 476 106 82 0 chr5 164928034 164928087 -34702063 + MSTD LTR MaLR 332 396 0 402 294 147 0 chr5 164928572 164928756 -34701394 + MIR SINE MIR 39 249 -13 22 0 0 0 chr5 164928916 164928938 -34701212 + AT_rich Low_complexity Low_complexity 1 22 0 611 220 30 30 chr5 164929219 164929409 -34700741 + MIR SINE MIR 3 194 -61 218 238 0 0 chr5 164929510 164929552 -34700598 - MIR SINE MIR -83 125 84 2152 141 0 0 chr5 164930199 164930505 -34699645 - AluSx SINE Alu -6 306 1 410 295 29 22 chr5 164930667 164930806 -34699344 - MIR3 SINE MIR -57 151 12 609 279 34 40 chr5 164931465 164931763 -34698387 - MER34B LTR ERV1 0 565 270 310 301 190 0 chr5 164931960 164932123 -34698027 - MIR SINE MIR -12 250 57 2614 222 63 73 chr5 164932256 164932342 -34697808 + MER21B LTR ERV1 1 86 -777 2274 122 0 6 chr5 164932342 164932654 -34697496 + AluSx SINE Alu 3 312 0 2069 108 43 0 chr5 164932656 164932934 -34697216 + AluSg SINE Alu 1 290 -20 2614 222 63 73 chr5 164932934 164933663 -34696487 + MER21B LTR ERV1 87 811 -52 27 0 0 0 chr5 164933743 164933770 -34696380 + AT_rich Low_complexity Low_complexity 1 27 0 324 301 122 61 chr5 164933858 164933945 -34696205 + MIR SINE MIR 25 105 -157 2615 62 0 7 chr5 164933945 164934254 -34695896 - AluY SINE Alu -4 307 1 324 301 122 61 chr5 164934254 164934379 -34695771 + MIR SINE MIR 105 250 -12 2045 80 47 15 chr5 164934383 164934656 -34695494 + L1MA5A LINE L1 5848 6111 -186 3849 170 8 78 chr5 164934656 164934727 -34695423 + LTR39 LTR ERV1 1 75 -708 1859 155 3 16 chr5 164934727 164935043 -34695107 + AluJo SINE Alu 1 312 0 3849 170 8 78 chr5 164935043 164935333 -34694817 + LTR39 LTR ERV1 75 384 -399 1596 159 41 26 chr5 164935333 164935440 -34694710 + AluJo SINE Alu 17 121 -191 216 0 0 0 chr5 164935440 164935464 -34694686 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1596 159 41 26 chr5 164935464 164935627 -34694523 + AluJo SINE Alu 121 291 -21 3849 170 8 78 chr5 164935627 164935927 -34694223 + LTR39 LTR ERV1 384 703 -80 2650 49 0 7 chr5 164935927 164936235 -34693915 + AluY SINE Alu 1 306 -5 3849 170 8 78 chr5 164936235 164936267 -34693883 + LTR39 LTR ERV1 703 736 -47 1717 183 27 7 chr5 164936267 164936567 -34693583 - AluJb SINE Alu -6 306 1 3849 170 8 78 chr5 164936567 164936712 -34693438 + LTR39 LTR ERV1 736 783 0 2045 80 47 15 chr5 164936712 164936777 -34693373 + L1MA5A LINE L1 6111 6197 -100 2212 102 0 7 chr5 164936820 164937129 -34693021 - AluSx SINE Alu 0 307 1 2515 153 16 78 chr5 164937152 164937707 -34692443 + L1MB7 LINE L1 5643 6163 -21 3101 256 153 25 chr5 164937723 164939033 -34691117 + HAL1 LINE L1 16 1493 -1014 2175 132 0 19 chr5 164939067 164939385 -34690765 - AluSx SINE Alu 0 312 1 318 236 18 100 chr5 164939457 164939520 -34690630 + HAL1 LINE L1 2407 2459 -48 2159 120 0 7 chr5 164939520 164939821 -34690329 - AluSx SINE Alu -13 299 1 318 236 18 100 chr5 164939821 164939867 -34690283 + HAL1 LINE L1 2459 2507 0 2161 109 7 3 chr5 164939879 164939895 -34690255 - AluSx SINE Alu -17 295 281 333 0 0 0 chr5 164939895 164939932 -34690218 + (TG)n Simple_repeat Simple_repeat 1 37 0 2161 109 7 3 chr5 164939932 164940209 -34689941 - AluSx SINE Alu -31 281 1 230 224 79 13 chr5 164940627 164940703 -34689447 - MIR SINE MIR -70 138 58 762 289 83 72 chr5 164940776 164940963 -34689187 + L1MC4 LINE L1 6830 7014 -1028 1796 161 7 11 chr5 164940963 164941275 -34688875 + AluJo SINE Alu 1 311 0 762 289 83 72 chr5 164941275 164941740 -34688410 + L1MC4 LINE L1 7014 7490 -552 493 272 61 77 chr5 164941729 164941743 -34688407 + L1MC5 LINE L1 7311 7324 -637 * 1746 164 0 51 chr5 164941743 164942055 -34688095 - AluSg SINE Alu -14 296 1 493 272 61 77 chr5 164942055 164942179 -34687971 + L1MC5 LINE L1 7324 7448 -513 2215 101 7 3 chr5 164942179 164942475 -34687675 + AluSx SINE Alu 2 298 -14 493 272 61 77 chr5 164942475 164942630 -34687520 + L1MC5 LINE L1 7448 7604 -357 2594 40 3 0 chr5 164942630 164942926 -34687224 - AluY SINE Alu -14 297 1 493 272 61 77 chr5 164942926 164943123 -34687027 + L1MC5 LINE L1 7604 7795 -166 1678 154 32 77 chr5 164943123 164943434 -34686716 + AluJo SINE Alu 1 297 -15 1684 169 34 24 chr5 164943434 164943730 -34686420 + AluJo SINE Alu 1 299 -13 1810 176 30 0 chr5 164943736 164944031 -34686119 + AluJb SINE Alu 6 309 -3 816 177 0 27 chr5 164944037 164944184 -34685966 + FLAM_C SINE Alu 1 143 0 1089 161 16 21 chr5 164944205 164944397 -34685753 + AluJb SINE Alu 122 312 0 2100 101 10 14 chr5 164944653 164944949 -34685201 - AluSp SINE Alu -18 295 1 2104 119 14 0 chr5 164945035 164945328 -34684822 - AluSx SINE Alu 0 312 16 720 246 5 27 chr5 164945374 164945561 -34684589 + MIR SINE MIR 70 252 -10 1214 279 81 22 chr5 164946096 164946694 -34683456 - L2 LINE L2 -2 3311 2670 310 233 0 0 chr5 164947042 164947102 -34683048 - L2 LINE L2 0 3313 3254 319 142 117 19 chr5 164947210 164947372 -34682778 + (GTCTG)n Simple_repeat Simple_repeat 2 179 0 305 314 241 27 chr5 164948002 164948233 -34681917 - L2 LINE L2 -385 2929 2749 2256 99 0 3 chr5 164948233 164948525 -34681625 + AluSg SINE Alu 1 291 -19 305 314 241 27 chr5 164948525 164948940 -34681210 - L2 LINE L2 -565 2749 2424 2571 56 0 3 chr5 164948940 164949245 -34680905 + AluY SINE Alu 1 304 -7 305 314 241 27 chr5 164949245 164949481 -34680669 - L2 LINE L2 -890 2424 1857 832 129 0 0 chr5 164949635 164949751 -34680399 + AluJb SINE Alu 1 116 -196 337 207 12 37 chr5 164949993 164950075 -34680075 - MIR SINE MIR -181 81 2 243 286 59 42 chr5 164950239 164950358 -34679792 - L3 LINE CR1 -50 1527 1407 246 271 318 0 chr5 164950371 164950478 -34679672 + MIR SINE MIR 9 149 -113 1700 165 6 54 chr5 164950479 164950615 -34679535 + AluJo SINE Alu 1 142 -170 1942 44 151 4 chr5 164950615 164950867 -34679283 + AluY SINE Alu 1 289 -22 1700 165 6 54 chr5 164950867 164951046 -34679104 + AluJo SINE Alu 142 301 -11 2304 110 0 3 chr5 164951052 164951353 -34678797 + AluSq SINE Alu 1 300 -13 677 112 0 0 chr5 164951394 164951492 -34678658 + FRAM SINE Alu 69 166 -10 2235 99 17 0 chr5 164951586 164951879 -34678271 - AluSx SINE Alu -14 298 1 223 347 0 0 chr5 164951959 164952031 -34678119 - L3 LINE CR1 -199 1378 1307 1715 174 32 0 chr5 164952088 164952369 -34677781 - AluJb SINE Alu -12 300 11 2145 124 0 37 chr5 164952410 164952733 -34677417 - AluSx SINE Alu -1 311 1 842 232 53 68 chr5 164953014 164953225 -34676925 + MIR SINE MIR 2 210 -52 2207 111 7 10 chr5 164953225 164953532 -34676618 + AluSg SINE Alu 1 306 -4 842 232 53 68 chr5 164953532 164953583 -34676567 + MIR SINE MIR 210 260 -2 1283 151 49 77 chr5 164953593 164953699 -34676451 + MER33 DNA MER1_type 1 108 -2477 2357 89 7 0 chr5 164953699 164953990 -34676160 + AluSx SINE Alu 1 293 -19 1283 151 49 77 chr5 164953990 164954207 -34675943 + MER33 DNA MER1_type 108 315 -9 284 299 36 22 chr5 164954315 164954452 -34675698 - MIR3 SINE MIR -21 187 49 723 223 57 31 chr5 164954681 164954874 -34675276 + MIR SINE MIR 8 205 -57 250 178 164 14 chr5 164954882 164954955 -34675195 - L2 LINE L2 -13 3300 3217 420 178 41 0 chr5 164954970 164955043 -34675107 + MER5A DNA MER1_type 1 76 -113 680 191 15 0 chr5 164955044 164955349 -34674801 + FLAM_C SINE Alu 1 307 0 502 144 32 16 chr5 164955367 164955492 -34674658 + GA-rich Low_complexity Low_complexity 3 129 0 279 0 0 0 chr5 164955493 164955524 -34674626 + (CAGG)n Simple_repeat Simple_repeat 1 31 0 407 85 287 21 chr5 164955524 164955618 -34674532 + MER5A DNA MER1_type 71 189 0 479 253 13 63 chr5 164955797 164955955 -34674195 - MLT1J LTR MaLR -266 245 96 412 257 37 9 chr5 164956023 164956132 -34674018 - MLT1J LTR MaLR -399 112 1 * 1225 149 53 4 chr5 164956132 164956388 -34673762 + MER33 DNA MER1_type 34 302 -22 279 289 84 0 chr5 164956559 164956642 -34673508 - L3 LINE CR1 -119 1458 1369 2376 100 3 3 chr5 164956642 164956951 -34673199 + AluSq SINE Alu 1 309 -4 1703 194 23 10 chr5 164956961 164957265 -34672885 + AluJo SINE Alu 1 308 -4 408 237 0 21 chr5 164957828 164957925 -34672225 + MIR SINE MIR 60 154 -108 186 247 49 49 chr5 164957874 164957955 -34672195 - L2 LINE L2 -1884 1430 1350 * 492 216 189 33 chr5 164957982 164958193 -34671957 - MIR SINE MIR -4 258 9 201 121 0 0 chr5 164958228 164958261 -34671889 + (T)n Simple_repeat Simple_repeat 1 33 0 369 239 186 78 chr5 164960148 164960315 -34669835 - MIR SINE MIR -32 230 46 212 392 8 0 chr5 164960555 164960675 -34669475 + L3 LINE CR1 1232 1352 -225 528 297 85 9 chr5 164962003 164962215 -34667935 + MIR SINE MIR 34 261 -1 237 209 0 0 chr5 164962320 164962363 -34667787 - MIR SINE MIR -70 138 96 462 260 120 3 chr5 164962738 164962889 -34667261 + MIR SINE MIR 11 173 -89 405 239 0 0 chr5 164962963 164963051 -34667099 - MIR SINE MIR -68 194 107 425 287 63 28 chr5 164963059 164963313 -34666837 + L3 LINE CR1 1209 1471 -106 347 283 21 41 chr5 164963569 164963711 -34666439 + L2 LINE L2 2930 3068 -204 837 205 23 6 chr5 164963711 164963882 -34666268 + MER5A DNA MER1_type 1 174 -15 2461 125 0 0 chr5 164963882 164964195 -34665955 - AluSq SINE Alu 0 313 1 2357 99 3 0 chr5 164964613 164964907 -34665243 + AluSx SINE Alu 1 295 -17 1891 162 10 16 chr5 164965048 164965351 -34664799 - AluJb SINE Alu -11 301 1 300 247 32 11 chr5 164965367 164965460 -34664690 - L1M4 LINE L1 -2946 3200 3106 2323 102 30 0 chr5 164965470 164965773 -34664377 - AluSx SINE Alu 0 312 1 2345 108 0 0 chr5 164965780 164966076 -34664074 - AluSg SINE Alu -14 296 1 2481 93 0 0 chr5 164966082 164966394 -34663756 - AluSq SINE Alu -1 312 1 325 196 91 105 chr5 164966431 164966574 -34663576 - MIR SINE MIR -11 251 111 194 337 36 0 chr5 164966820 164966903 -34663247 - MIR SINE MIR -100 162 77 762 180 0 0 chr5 164966943 164967071 -34663079 + FLAM_A SINE Alu 2 129 -4 290 330 30 0 chr5 164967213 164967313 -34662837 - MIR SINE MIR -57 151 49 2360 94 3 22 chr5 164967719 164968037 -34662113 - AluSx SINE Alu 0 312 1 305 281 123 0 chr5 164968051 164968165 -34661985 - MIR3 SINE MIR -3 205 78 549 254 88 12 chr5 164968859 164969099 -34661051 + MIR SINE MIR 2 259 -3 196 307 67 0 chr5 164969101 164969176 -34660974 + MIR SINE MIR 57 136 -72 184 260 31 42 chr5 164969724 164969820 -34660330 + L2 LINE L2 2996 3090 -182 631 288 234 0 chr5 164969850 164970124 -34660026 + MER102b DNA MER1_type 1 338 -3 183 233 11 89 chr5 164970885 164970975 -34659175 - MER5A DNA MER1_type -29 160 78 284 279 57 3 chr5 164971503 164971621 -34658529 - MIR SINE MIR -68 140 20 344 254 42 25 chr5 164972130 164972248 -34657902 + L3 LINE CR1 808 927 -650 971 253 135 26 chr5 164972340 164973192 -34656958 - L2 LINE L2 -6 3307 2356 852 241 33 41 chr5 164973666 164973871 -34656279 + MIR SINE MIR 6 210 -52 2318 112 3 13 chr5 164973871 164974183 -34655967 + AluSp SINE Alu 2 310 -3 852 241 33 41 chr5 164974183 164974222 -34655928 + MIR SINE MIR 210 248 -14 223 340 50 0 chr5 164974974 164975074 -34655076 - MIR3 SINE MIR -21 187 83 542 312 53 4 chr5 164975307 164975554 -34654596 + MIR SINE MIR 4 262 0 289 352 8 8 chr5 164975614 164975739 -34654411 + MIR SINE MIR 25 149 -59 406 234 44 37 chr5 164976081 164976232 -34653918 + MIR SINE MIR 9 157 -62 905 186 0 29 chr5 164976483 164976655 -34653495 - FRAM SINE Alu -10 166 1 216 204 56 0 chr5 164976666 164976720 -34653430 - MIR SINE MIR -67 141 85 264 254 16 0 chr5 164976735 164976798 -34653352 + MER96 DNA MER1_type? 2 65 -110 1614 155 17 40 chr5 164976829 164977126 -34653024 - AluJb SINE Alu -21 291 2 203 171 0 0 chr5 164978147 164978188 -34651962 + MIR SINE MIR 82 122 -86 237 252 270 26 chr5 164978381 164978496 -34651654 - MIR3 SINE MIR -50 158 16 288 0 0 0 chr5 164979033 164979065 -34651085 + (TG)n Simple_repeat Simple_repeat 2 33 0 363 203 25 0 chr5 164979585 164979664 -34650486 - MIR3 SINE MIR -46 162 82 182 349 12 0 chr5 164980017 164980103 -34650047 + MIR SINE MIR 145 231 -31 1860 126 31 0 chr5 164980235 164980521 -34649629 - AluSc SINE Alu -14 295 1 489 325 55 0 chr5 164980748 164980948 -34649202 + MIR SINE MIR 9 219 -43 459 289 83 11 chr5 164981700 164981880 -34648270 + MIR SINE MIR 16 208 -54 231 200 13 40 chr5 164982587 164982662 -34647488 + (GGGTG)n Simple_repeat Simple_repeat 3 75 0 289 258 15 0 chr5 164983147 164983213 -34646937 + L2 LINE L2 3187 3253 -19 249 239 99 0 chr5 164983337 164983408 -34646742 + MIR SINE MIR 60 137 -71 650 301 14 23 chr5 164983413 164983629 -34646521 - MIR SINE MIR -3 259 46 1589 162 30 0 chr5 164983654 164983919 -34646231 + AluJb SINE Alu 22 294 -18 1621 112 108 25 chr5 164983922 164984199 -34645951 + AluSq SINE Alu 2 301 -12 233 246 53 0 chr5 164984205 164984262 -34645888 - MIR SINE MIR -202 60 1 650 202 103 49 chr5 164984855 164985000 -34645150 + MIR SINE MIR 48 209 -53 2081 112 30 0 chr5 164985000 164985295 -34644855 + AluSx SINE Alu 1 304 -8 650 202 103 49 chr5 164985295 164985352 -34644798 + MIR SINE MIR 209 261 -1 272 308 47 0 chr5 164985462 164985569 -34644581 + MIR SINE MIR 81 192 -70 619 324 23 54 chr5 164985805 164986157 -34643993 - MER102b DNA MER1_type 0 341 1 229 325 68 8 chr5 164986223 164986340 -34643810 - L2 LINE L2 -218 3054 2931 884 244 62 0 chr5 164987100 164987309 -34642841 - MIR SINE MIR -29 233 12 2035 130 0 0 chr5 164987389 164987673 -34642477 - AluSx SINE Alu -23 289 6 402 21 0 0 chr5 164987689 164987736 -34642414 + (TG)n Simple_repeat Simple_repeat 1 47 0 350 206 0 49 chr5 164987737 164987839 -34642311 - L1MC1 LINE L1 -12 6321 6225 1865 122 80 0 chr5 164988002 164988289 -34641861 + AluSp SINE Alu 1 310 -3 537 272 38 43 chr5 164989137 164989321 -34640829 - MIR SINE MIR 0 262 80 555 267 14 27 chr5 164990385 164990531 -34639619 + MIR SINE MIR 111 254 -8 426 259 8 53 chr5 164990690 164990821 -34639329 - MIR SINE MIR -118 144 20 822 285 127 34 chr5 164991136 164991515 -34638635 - L2 LINE L2 -1 3312 2899 227 158 0 0 chr5 164991698 164991736 -34638414 - MER103 DNA DNA -79 87 50 675 300 83 0 chr5 164991948 164992178 -34637972 - MIR SINE MIR -8 254 6 428 297 182 5 chr5 164992657 164992866 -34637284 + MIR SINE MIR 13 258 -4 613 245 87 27 chr5 164993092 164993249 -34636901 - MIR SINE MIR -14 248 77 1283 120 107 58 chr5 164993249 164993474 -34636676 - MER46A DNA MER2_type 0 236 1 613 245 87 27 chr5 164993474 164993500 -34636650 - MIR SINE MIR -185 77 54 202 367 0 17 chr5 164993546 164993666 -34636484 - MIR SINE MIR -74 134 17 761 280 147 34 chr5 164994407 164994995 -34635155 + L2 LINE L2 2624 3272 0 187 224 269 0 chr5 164995789 164995856 -34634294 + MIR SINE MIR 108 192 -70 * 514 257 29 29 chr5 164995852 164996023 -34634127 - MIR SINE MIR -19 243 73 392 276 30 15 chr5 164996061 164996195 -34633955 + MIR SINE MIR 104 239 -23 2216 104 0 13 chr5 164997079 164997386 -34632764 + AluSx SINE Alu 1 303 -9 1759 178 7 3 chr5 164997680 164997984 -34632166 + AluJo SINE Alu 1 305 -7 949 206 145 7 chr5 164998111 164998387 -34631763 + MER113 DNA MER1_type? 100 413 -108 293 253 96 68 chr5 164998502 164998648 -34631502 + MIR3 SINE MIR 4 153 -55 1622 188 16 3 chr5 164999128 164999431 -34630719 - AluJb SINE Alu -5 307 1 584 258 38 38 chr5 164999747 164999933 -34630217 - MIR SINE MIR 0 262 77 2307 93 7 0 chr5 165000059 165000369 -34629781 - AluSq SINE Alu 0 313 2 465 187 32 49 chr5 165000700 165000823 -34629327 - FLAM_A SINE Alu -3 139 19 366 250 133 28 chr5 165000824 165000963 -34629187 - MIR SINE MIR -62 146 43 610 181 7 97 chr5 165000993 165001094 -34629056 + MER45A DNA AcHobo 2 86 -1495 2158 77 3 33 chr5 165001094 165001393 -34628757 - AluSx SINE Alu -17 295 6 610 181 7 97 chr5 165001393 165001446 -34628704 + MER45A DNA AcHobo 86 142 -36 32 26 0 0 chr5 165002333 165002372 -34627778 + AT_rich Low_complexity Low_complexity 1 39 0 1792 169 0 3 chr5 165002372 165002674 -34627476 + AluJo SINE Alu 1 301 -11 198 0 0 0 chr5 165002786 165002808 -34627342 + (GGAA)n Simple_repeat Simple_repeat 2 23 0 258 333 71 14 chr5 165002817 165003027 -34627123 - L3 LINE CR1 -206 1371 1150 722 241 48 87 chr5 165003194 165003229 -34626921 - L1MEd LINE L1 -5087 1032 997 2289 94 0 0 chr5 165003229 165003526 -34626624 - AluSg SINE Alu -13 297 1 722 241 48 87 chr5 165003526 165003972 -34626178 - L1MEd LINE L1 -5122 997 570 896 98 8 0 chr5 165004145 165004277 -34625873 - AluSp/q SINE Alu 0 313 181 194 258 65 16 chr5 165004279 165004341 -34625809 - L2 LINE L2 -53 3219 3155 625 128 0 0 chr5 165004466 165004552 -34625598 - AluS SINE Alu -225 87 2 1207 143 5 15 chr5 165004596 165004799 -34625351 + AluJo SINE Alu 1 201 -111 1832 116 54 4 chr5 165005165 165005441 -34624709 + AluSx SINE Alu 1 290 -22 245 321 185 16 chr5 165005952 165006136 -34624014 - MIR SINE MIR -24 238 24 1024 175 132 76 chr5 165006198 165006384 -34623766 - L1MD3 LINE L1 -6 7989 7815 1777 160 6 13 chr5 165006384 165006697 -34623453 - AluJo SINE Alu -1 311 1 1024 175 132 76 chr5 165006697 165006852 -34623298 - L1MD3 LINE L1 -180 7815 7629 1337 19 0 0 chr5 165006862 165007016 -34623134 - L1PA4 LINE L1 -2 6153 6000 208 224 0 20 chr5 165007112 165007161 -34622989 + L2 LINE L2 2921 2968 -346 309 221 44 15 chr5 165007500 165007568 -34622582 + L1MC4a LINE L1 5831 5900 -1908 1339 191 37 50 chr5 165008436 165008734 -34621416 + AluSx SINE Alu 1 294 -8 364 253 61 20 chr5 165008909 165009008 -34621142 + MER20B DNA MER1_type 61 163 -620 314 129 54 118 chr5 165009471 165009507 -34620643 - MER58 DNA MER1_type 0 2420 2383 1657 168 10 10 chr5 165009507 165009811 -34620339 + AluJb SINE Alu 1 304 -8 314 129 54 118 chr5 165009811 165009867 -34620283 - MER58 DNA MER1_type -37 2383 129 317 339 87 33 chr5 165009947 165010336 -34619814 + L2 LINE L2 2841 3250 -22 314 312 72 16 chr5 165010807 165011026 -34619124 - MIR SINE MIR -18 244 17 238 261 34 23 chr5 165012325 165012413 -34617737 - MIR SINE MIR -103 105 17 325 292 0 0 chr5 165012926 165013015 -34617135 - MIR SINE MIR -51 211 123 484 141 82 0 chr5 165013823 165013908 -34616242 + FLAM_A SINE Alu 10 101 -41 227 282 92 42 chr5 165013960 165014102 -34616048 - MIR SINE MIR 0 262 114 1830 117 11 18 chr5 165014199 165014480 -34615670 - AluY SINE Alu -32 279 1 272 148 50 30 chr5 165014588 165014689 -34615461 + (TA)n Simple_repeat Simple_repeat 1 103 0 360 42 0 0 chr5 165014696 165014744 -34615406 + AluY SINE Alu 249 296 -6 2204 81 7 0 chr5 165014777 165015072 -34615078 - AluSq SINE Alu -16 297 1 286 262 36 12 chr5 165015093 165015177 -34614973 - L1M LINE L1 -873 5424 5339 390 211 22 0 chr5 165015461 165015551 -34614599 + MIR SINE MIR 66 157 -105 206 121 0 0 chr5 165015553 165015586 -34614564 + (T)n Simple_repeat Simple_repeat 1 33 0 1287 101 0 67 chr5 165015608 165015817 -34614333 - AluSx SINE Alu -117 195 1 1577 148 58 0 chr5 165015855 165016112 -34614038 + AluJb SINE Alu 5 276 -36 2167 98 0 3 chr5 165016150 165016446 -34613704 - AluSx SINE Alu -17 295 1 192 171 0 0 chr5 165016456 165016491 -34613659 - MIR SINE MIR -11 251 217 523 339 19 0 chr5 165016502 165016727 -34613423 - L2 LINE L2 -243 3029 2800 3059 281 71 77 chr5 165016830 165017024 -34613126 - L2 LINE L2 -3 3310 3116 2167 128 0 0 chr5 165017024 165017336 -34612814 + AluSq SINE Alu 1 312 -1 3059 281 71 77 chr5 165017336 165017460 -34612690 - L2 LINE L2 -197 3116 2993 6068 124 27 15 chr5 165017460 165018417 -34611733 - LTR5 LTR ERVK 0 969 1 3059 281 71 77 chr5 165018417 165018895 -34611255 - L2 LINE L2 -320 2993 2514 269 30 0 0 chr5 165018895 165018928 -34611222 + U2 snRNA snRNA 1 33 -155 2061 123 33 0 chr5 165018936 165019238 -34610912 + AluSx SINE Alu 1 312 0 3059 281 71 77 chr5 165019238 165019951 -34610199 - L2 LINE L2 -806 2507 1792 2100 130 0 0 chr5 165019951 165020250 -34609900 - AluSc SINE Alu -10 299 1 1796 107 90 14 chr5 165020259 165020549 -34609601 - AluSx SINE Alu 0 312 1 837 153 0 0 chr5 165020553 165020677 -34609473 - FLAM_C SINE Alu -7 126 3 3059 281 71 77 chr5 165020677 165021006 -34609144 - L2 LINE L2 -1532 1781 1421 322 233 217 8 chr5 165021026 165021155 -34608995 - MIR SINE MIR -79 183 28 200 179 54 36 chr5 165021389 165021445 -34608705 - MIR SINE MIR -132 130 74 2569 45 0 3 chr5 165022046 165022358 -34607792 + AluY SINE Alu 1 311 0 239 90 0 90 chr5 165022747 165022825 -34607325 + (AGGGGG)n Simple_repeat Simple_repeat 5 75 0 201 320 72 16 chr5 165022884 165023009 -34607141 - MIR SINE MIR -55 207 76 665 260 128 43 chr5 165023166 165023675 -34606475 - L2 LINE L2 -1 3312 2772 1665 109 120 7 chr5 165023676 165023985 -34606165 - AluSg1 SINE Alu 0 340 1 1062 307 107 24 chr5 165023986 165024078 -34606072 - L2 LINE L2 -532 2782 2699 793 144 0 58 chr5 165024078 165024255 -34605895 + FLAM_C SINE Alu 1 133 0 1062 307 107 24 chr5 165024255 165024715 -34605435 - L2 LINE L2 -615 2699 2184 208 303 128 0 chr5 165024735 165024844 -34605306 + L3 LINE CR1 1422 1544 -33 1667 93 0 57 chr5 165075656 165075903 -34554247 - AluY SINE Alu 0 311 79 386 119 0 15 chr5 165075905 165075972 -34554178 + (TCCC)n Simple_repeat Simple_repeat 3 68 0 801 258 0 0 chr5 165075972 165076158 -34553992 - AluSg/x SINE Alu 0 312 127 1804 123 29 4 chr5 165076626 165076903 -34553247 + AluSg SINE Alu 13 296 -14 2317 102 30 0 chr5 165076910 165077324 -34552826 + AluSx SINE Alu 1 423 0 1882 162 10 16 chr5 165077337 165077640 -34552510 + AluJb SINE Alu 1 301 -11 279 95 0 0 chr5 165077781 165077823 -34552327 - Alu SINE Alu -7 293 252 277 298 87 62 chr5 165078575 165078864 -34551286 + L3 LINE CR1 1274 1569 -8 472 263 179 6 chr5 165079281 165079460 -34550690 - MIR SINE MIR -32 230 21 185 307 40 0 chr5 165079887 165079962 -34550188 + MIR SINE MIR 55 132 -76 268 31 0 0 chr5 165079962 165079994 -34550156 + (TTTC)n Simple_repeat Simple_repeat 1 40 0 2304 54 0 0 chr5 165079994 165080273 -34549877 - AluY SINE Alu -31 280 2 198 267 0 0 chr5 165081384 165081429 -34548721 + L2 LINE L2 3215 3259 -13 371 156 0 16 chr5 165081985 165082049 -34548101 + MER45 DNA AcHobo 1519 1581 0 564 227 67 80 chr5 165082420 165082658 -34547492 + MIR SINE MIR 27 261 -1 1258 71 0 0 chr5 165082658 165082812 -34547338 + AluSq SINE Alu 1 154 -159 432 94 47 0 chr5 165082815 165082879 -34547271 + Alu SINE Alu 225 291 -18 270 314 24 40 chr5 165082921 165083045 -34547105 + MIR SINE MIR 66 187 -75 193 271 0 0 chr5 165083374 165083422 -34546728 + L2 LINE L2 1378 1425 -1889 2182 115 0 3 chr5 165083646 165083959 -34546191 + AluSx SINE Alu 1 312 0 725 297 65 4 chr5 165083982 165084211 -34545939 + MIR SINE MIR 20 262 0 1927 95 44 4 chr5 165084664 165084784 -34545366 + AluSq SINE Alu 1 115 -196 226 0 59 0 chr5 165084784 165084818 -34545332 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1927 95 44 4 chr5 165084818 165084997 -34545153 + AluSq SINE Alu 115 311 0 231 194 69 42 chr5 165085337 165085409 -34544741 + MIR SINE MIR 46 119 -89 396 0 0 0 chr5 165085635 165085679 -34544471 + (TG)n Simple_repeat Simple_repeat 2 45 0 847 124 0 0 chr5 165086126 165086247 -34543903 + AluJo/FLAM SINE Alu 1 121 -191 2306 84 0 0 chr5 165086247 165086546 -34543604 - AluSq SINE Alu -13 300 2 815 158 0 0 chr5 165086548 165086668 -34543482 - AluJb SINE Alu -15 297 178 357 205 0 3 chr5 165086984 165087078 -34543072 + MIR SINE MIR 56 141 -67 1777 181 3 3 chr5 165087078 165087382 -34542768 + AluJo SINE Alu 1 304 -8 1699 193 7 3 chr5 165087756 165088052 -34542098 + MLT1A1 LTR MaLR 1 297 -68 2345 95 0 0 chr5 165088052 165088358 -34541792 + AluSx SINE Alu 1 306 -6 1206 140 0 0 chr5 165088359 165088537 -34541613 + AluSg/x SINE Alu 134 311 -1 355 100 114 0 chr5 165088539 165088609 -34541541 + MLT1A1 LTR MaLR 288 365 0 216 308 44 11 chr5 165088825 165088916 -34541234 + MIR3 SINE MIR 92 185 -23 2455 84 0 49 chr5 165089393 165089760 -34540390 - L1PA8 LINE L1 -2 6170 5822 1706 67 11 81 chr5 165089760 165089912 -34540238 + L1P4 LINE L1 5523 5647 -521 2132 106 14 0 chr5 165089912 165090204 -34539946 + AluSx SINE Alu 1 296 -16 1706 67 11 81 chr5 165090204 165090335 -34539815 + L1P4 LINE L1 5647 5786 -382 1043 170 33 9 chr5 165090467 165090679 -34539471 + MER33 DNA MER1_type 1 217 -107 1595 169 14 17 chr5 165090679 165090698 -34539452 - AluJb SINE Alu -13 299 281 213 65 0 0 chr5 165090698 165090729 -34539421 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1595 169 14 17 chr5 165090729 165090999 -34539151 - AluJb SINE Alu -31 281 11 524 297 85 9 chr5 165091485 165091697 -34538453 + MIR SINE MIR 34 261 -1 236 209 0 0 chr5 165091802 165091845 -34538305 - MIR SINE MIR -70 138 96 477 260 120 3 chr5 165092220 165092371 -34537779 + MIR SINE MIR 11 173 -89 405 239 0 0 chr5 165092445 165092533 -34537617 - MIR SINE MIR -68 194 107 459 287 63 28 chr5 165092541 165092795 -34537355 + L3 LINE CR1 1209 1471 -106 362 283 21 41 chr5 165093051 165093193 -34536957 + L2 LINE L2 2930 3068 -204 837 205 23 6 chr5 165093193 165093364 -34536786 + MER5A DNA MER1_type 1 174 -15 2400 99 0 0 chr5 165093364 165093676 -34536474 - AluSq SINE Alu -1 312 1 2039 133 0 0 chr5 165094094 165094387 -34535763 + AluSx SINE Alu 1 293 -19 28 0 0 0 chr5 165094387 165094415 -34535735 + AT_rich Low_complexity Low_complexity 1 28 0 219 36 0 0 chr5 165094417 165094445 -34535705 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 946 124 0 14 chr5 165094649 165094794 -34535356 + FLAM_C SINE Alu 1 143 0 194 312 128 0 chr5 165095465 165095574 -34534576 - L3 LINE CR1 -33 1544 1422 1062 307 107 24 chr5 165095594 165096054 -34534096 + L2 LINE L2 2184 2699 -615 793 144 0 58 chr5 165096054 165096231 -34533919 - FLAM_C SINE Alu 0 133 1 1062 307 107 24 chr5 165096231 165096323 -34533827 + L2 LINE L2 2699 2782 -532 1666 109 120 7 chr5 165096324 165096648 -34533502 + AluSg1 SINE Alu 1 355 0 665 260 128 43 chr5 165096649 165097158 -34532992 + L2 LINE L2 2772 3312 -1 201 320 72 16 chr5 165097315 165097440 -34532710 + MIR SINE MIR 76 207 -55 220 99 0 84 chr5 165097499 165097570 -34532580 + (CCCCCT)n Simple_repeat Simple_repeat 5 69 0 189 107 0 0 chr5 165097949 165097977 -34532173 + (T)n Simple_repeat Simple_repeat 1 28 0 335 294 32 8 chr5 165098088 165098214 -34531936 - Charlie8 DNA MER1_type -2288 129 1 229 325 68 8 chr5 165098280 165098397 -34531753 - L2 LINE L2 -218 3054 2931 884 244 62 0 chr5 165099157 165099366 -34530784 - MIR SINE MIR -29 233 12 2048 127 0 0 chr5 165099446 165099730 -34530420 - AluSx SINE Alu -23 289 6 384 22 0 0 chr5 165099746 165099791 -34530359 + (TG)n Simple_repeat Simple_repeat 1 45 0 1986 169 12 48 chr5 165099792 165099926 -34530224 - L1MC1 LINE L1 -12 6321 6184 1434 180 50 7 chr5 165099926 165100209 -34529941 - AluJo SINE Alu -17 295 1 1986 169 12 48 chr5 165100209 165100488 -34529662 - L1MC1 LINE L1 -149 6184 5923 260 276 23 30 chr5 165100877 165101009 -34529141 + L2 LINE L2 2898 3052 -220 273 237 246 8 chr5 165101152 165101270 -34528880 - MIR3 SINE MIR -8 200 55 492 286 126 42 chr5 165101298 165101553 -34528597 - L1ME4a LINE L1 -63 6058 5755 2157 109 0 0 chr5 165101553 165101846 -34528304 - AluSx SINE Alu -19 293 1 492 286 126 42 chr5 165101846 165101995 -34528155 - L1ME4a LINE L1 -366 5755 5620 188 237 0 0 chr5 165102023 165102061 -34528089 - MIR3 SINE MIR -10 198 161 1850 125 80 0 chr5 165102195 165102482 -34527668 + AluSp SINE Alu 1 310 -3 537 272 38 43 chr5 165103336 165103520 -34526630 - MIR SINE MIR 0 262 80 555 267 14 27 chr5 165104584 165104730 -34525420 + MIR SINE MIR 111 254 -8 426 259 8 53 chr5 165104889 165105020 -34525130 - MIR SINE MIR -118 144 20 822 301 119 26 chr5 165105335 165105714 -34524436 - L2 LINE L2 -1 3312 2899 227 158 0 0 chr5 165105897 165105935 -34524215 - MER103 DNA DNA -79 87 50 675 300 83 0 chr5 165106147 165106377 -34523773 - MIR SINE MIR -8 254 6 428 297 182 5 chr5 165106856 165107065 -34523085 + MIR SINE MIR 13 258 -4 613 245 87 27 chr5 165107291 165107448 -34522702 - MIR SINE MIR -14 248 77 1283 120 107 58 chr5 165107448 165107673 -34522477 - MER46A DNA MER2_type 0 236 1 613 245 87 27 chr5 165107673 165107699 -34522451 - MIR SINE MIR -185 77 54 202 367 0 17 chr5 165107745 165107865 -34522285 - MIR SINE MIR -74 134 17 761 280 147 34 chr5 165108606 165109194 -34520956 + L2 LINE L2 2624 3272 0 187 224 269 0 chr5 165109988 165110055 -34520095 + MIR SINE MIR 108 192 -70 * 514 257 29 29 chr5 165110051 165110222 -34519928 - MIR SINE MIR -19 243 73 392 276 30 15 chr5 165110260 165110394 -34519756 + MIR SINE MIR 104 239 -23 2201 108 0 13 chr5 165111278 165111585 -34518565 + AluSx SINE Alu 1 303 -9 1907 151 7 3 chr5 165111879 165112183 -34517967 + AluJo SINE Alu 1 305 -7 949 206 145 7 chr5 165112310 165112586 -34517564 + MER113 DNA MER1_type? 100 413 -108 293 253 96 68 chr5 165112701 165112847 -34517303 + MIR3 SINE MIR 4 153 -55 1628 185 17 3 chr5 165113327 165113629 -34516521 - AluJb SINE Alu -6 306 1 2331 96 0 0 chr5 165113635 165113948 -34516202 - AluSq SINE Alu 0 313 1 327 196 91 105 chr5 165113985 165114128 -34516022 - MIR SINE MIR -11 251 111 202 337 36 0 chr5 165114374 165114457 -34515693 - MIR SINE MIR -100 162 77 810 180 0 0 chr5 165114497 165114625 -34515525 + FLAM_A SINE Alu 2 129 -4 300 330 30 0 chr5 165114767 165114867 -34515283 - MIR SINE MIR -57 151 49 2236 91 3 22 chr5 165115273 165115591 -34514559 - AluSx SINE Alu 0 312 1 310 288 119 0 chr5 165115605 165115723 -34514427 - MIR3 SINE MIR -3 205 74 668 254 88 12 chr5 165116413 165116653 -34513497 + MIR SINE MIR 2 259 -3 201 293 67 0 chr5 165116655 165116730 -34513420 + MIR SINE MIR 57 136 -72 186 330 17 25 chr5 165117278 165117396 -34512754 + L2 LINE L2 2996 3112 -160 651 288 234 0 chr5 165117404 165117678 -34512472 + MER102b DNA MER1_type 1 338 -3 192 233 11 89 chr5 165118439 165118529 -34511621 - MER5A DNA MER1_type -29 160 78 299 313 37 30 chr5 165119057 165119191 -34510959 - MIR3 SINE MIR -68 140 6 355 266 47 23 chr5 165119684 165119812 -34510338 + L3 LINE CR1 808 938 -639 1058 257 134 25 chr5 165119890 165120746 -34509404 - L2 LINE L2 -2 3311 2356 865 241 33 41 chr5 165121220 165121425 -34508725 + MIR SINE MIR 6 210 -52 2173 112 3 13 chr5 165121425 165121737 -34508413 + AluSp SINE Alu 2 310 -3 865 241 33 41 chr5 165121737 165121776 -34508374 + MIR SINE MIR 210 248 -14 233 340 50 0 chr5 165122528 165122628 -34507522 - MIR3 SINE MIR -21 187 83 675 312 53 4 chr5 165122861 165123108 -34507042 + MIR SINE MIR 4 262 0 307 359 7 14 chr5 165123148 165123293 -34506857 + MIR3 SINE MIR 6 149 -59 411 234 44 37 chr5 165123635 165123786 -34506364 + MIR SINE MIR 9 157 -62 846 186 0 29 chr5 165124037 165124209 -34505941 - FRAM SINE Alu -10 166 1 221 204 56 0 chr5 165124220 165124274 -34505876 - MIR SINE MIR -67 141 85 274 254 16 0 chr5 165124289 165124352 -34505798 + MER96 DNA MER1_type? 2 65 -110 1500 155 17 40 chr5 165124383 165124680 -34505470 - AluJb SINE Alu -21 291 2 203 171 0 0 chr5 165125700 165125741 -34504409 + MIR SINE MIR 82 122 -86 237 252 270 26 chr5 165125934 165126049 -34504101 - MIR3 SINE MIR -50 158 16 270 0 0 0 chr5 165126586 165126616 -34503534 + (TG)n Simple_repeat Simple_repeat 2 31 0 363 203 25 0 chr5 165127136 165127215 -34502935 - MIR3 SINE MIR -46 162 82 182 349 12 0 chr5 165127568 165127654 -34502496 + MIR SINE MIR 145 231 -31 1860 126 31 0 chr5 165127786 165128072 -34502078 - AluSc SINE Alu -14 295 1 489 325 55 0 chr5 165128299 165128499 -34501651 + MIR SINE MIR 9 219 -43 459 289 83 11 chr5 165129251 165129431 -34500719 + MIR SINE MIR 16 208 -54 231 200 13 40 chr5 165130138 165130213 -34499937 + (GGGTG)n Simple_repeat Simple_repeat 3 75 0 289 258 15 0 chr5 165130698 165130764 -34499386 + L2 LINE L2 3187 3253 -19 191 250 125 0 chr5 165130888 165130944 -34499206 + MIR SINE MIR 60 122 -86 235 354 35 14 chr5 165131840 165131984 -34498166 - L3 LINE CR1 -225 1352 1206 377 239 186 78 chr5 165132201 165132368 -34497782 + MIR SINE MIR 46 230 -32 185 333 0 0 chr5 165133651 165133705 -34496445 - L2 LINE L2 -4 3309 3256 201 121 0 0 chr5 165134255 165134288 -34495862 + (A)n Simple_repeat Simple_repeat 1 33 0 482 224 189 33 chr5 165134323 165134534 -34495616 + MIR SINE MIR 9 258 -4 189 247 49 49 chr5 165134561 165134642 -34495508 + L2 LINE L2 1350 1430 -1884 * 415 237 0 21 chr5 165134591 165134688 -34495462 - MIR SINE MIR -108 154 60 239 241 18 45 chr5 165135170 165135282 -34494868 + (CCCG)n Simple_repeat Simple_repeat 4 112 0 25 31 0 0 chr5 165135291 165135323 -34494827 + GC_rich Low_complexity Low_complexity 1 32 0 234 308 25 17 chr5 165135510 165135630 -34494520 + C-rich Low_complexity Low_complexity 6 126 0 35 54 0 0 chr5 165135876 165135932 -34494218 + GC_rich Low_complexity Low_complexity 1 56 0 262 280 117 29 chr5 165136627 165136799 -34493351 - MIR3 SINE MIR -71 137 10 2422 62 0 7 chr5 165136957 165137261 -34492889 + AluSg SINE Alu 1 302 -8 1931 101 23 46 chr5 165137305 165137611 -34492539 + AluSx SINE Alu 1 299 -13 2094 116 3 0 chr5 165137611 165137903 -34492247 + AluSg SINE Alu 1 293 -17 1927 91 91 0 chr5 165137903 165138179 -34491971 + AluY SINE Alu 1 301 -10 234 294 54 43 chr5 165138203 165138295 -34491855 - MER5A DNA MER1_type -29 160 68 204 277 0 31 chr5 165138872 165138937 -34491213 - L2 LINE L2 -25 3247 3185 2277 97 0 0 chr5 165139083 165139381 -34490769 - AluSx SINE Alu -14 298 1 280 324 206 10 chr5 165140080 165140354 -34489796 + L2 LINE L2 2212 2431 -883 2184 113 0 7 chr5 165140354 165140664 -34489486 - AluSg1 SINE Alu -1 308 1 280 324 206 10 chr5 165140664 165140772 -34489378 + L2 LINE L2 2431 2669 -645 892 239 28 14 chr5 165140969 165141187 -34488963 + MIR SINE MIR 21 241 -21 1746 171 75 6 chr5 165141196 165141518 -34488632 + MER2 DNA MER2_type 1 344 0 1627 167 44 0 chr5 165141564 165141858 -34488292 - AluJo SINE Alu -5 307 1 474 181 194 19 chr5 165141858 165142013 -34488137 - L1MD3 LINE L1 -185 7810 7629 1337 19 0 0 chr5 165142023 165142177 -34487973 - L1PA4 LINE L1 -2 6153 6000 208 224 0 20 chr5 165142273 165142322 -34487828 + L2 LINE L2 2921 2968 -346 309 221 44 15 chr5 165142661 165142729 -34487421 + L1MC4a LINE L1 5831 5900 -1908 1339 191 37 50 chr5 165143597 165143895 -34486255 + AluSx SINE Alu 1 294 -8 364 253 61 20 chr5 165144070 165144169 -34485981 + MER20B DNA MER1_type 61 163 -620 314 129 54 118 chr5 165144632 165144668 -34485482 - MER58 DNA MER1_type 0 2420 2383 1657 168 10 10 chr5 165144668 165144972 -34485178 + AluJb SINE Alu 1 304 -8 314 129 54 118 chr5 165144972 165145028 -34485122 - MER58 DNA MER1_type -37 2383 129 317 339 87 33 chr5 165145108 165145497 -34484653 + L2 LINE L2 2841 3250 -22 314 312 72 16 chr5 165145968 165146187 -34483963 - MIR SINE MIR -18 244 17 238 261 34 23 chr5 165147486 165147574 -34482576 - MIR SINE MIR -103 105 17 325 292 0 0 chr5 165148087 165148176 -34481974 - MIR SINE MIR -51 211 123 484 141 82 0 chr5 165148984 165149069 -34481081 + FLAM_A SINE Alu 10 101 -41 227 282 92 42 chr5 165149121 165149263 -34480887 - MIR SINE MIR 0 262 114 1830 117 11 18 chr5 165149360 165149641 -34480509 - AluY SINE Alu -32 279 1 272 148 50 30 chr5 165149749 165149850 -34480300 + (TA)n Simple_repeat Simple_repeat 1 103 0 360 42 0 0 chr5 165149857 165149905 -34480245 + AluY SINE Alu 249 296 -6 2204 81 7 0 chr5 165149938 165150233 -34479917 - AluSq SINE Alu -16 297 1 286 262 36 12 chr5 165150254 165150338 -34479812 - L1M LINE L1 -873 5424 5339 390 211 22 0 chr5 165150622 165150712 -34479438 + MIR SINE MIR 66 157 -105 206 121 0 0 chr5 165150714 165150747 -34479403 + (T)n Simple_repeat Simple_repeat 1 33 0 1287 101 0 67 chr5 165150769 165150978 -34479172 - AluSx SINE Alu -117 195 1 1577 148 58 0 chr5 165151016 165151273 -34478877 + AluJb SINE Alu 5 276 -36 2167 98 0 3 chr5 165151311 165151607 -34478543 - AluSx SINE Alu -17 295 1 192 171 0 0 chr5 165151617 165151652 -34478498 - MIR SINE MIR -11 251 217 523 339 19 0 chr5 165151663 165151888 -34478262 - L2 LINE L2 -243 3029 2800 3190 240 82 88 chr5 165151991 165152185 -34477965 - L2 LINE L2 -3 3310 3116 2167 128 0 0 chr5 165152185 165152497 -34477653 + AluSq SINE Alu 1 312 -1 3190 240 82 88 chr5 165152497 165152621 -34477529 - L2 LINE L2 -197 3116 2993 6068 124 27 15 chr5 165152621 165153578 -34476572 - LTR5 LTR ERVK 0 969 1 3190 240 82 88 chr5 165153578 165154056 -34476094 - L2 LINE L2 -320 2993 2513 269 30 0 0 chr5 165154056 165154089 -34476061 + U2 snRNA snRNA 1 33 -155 2061 123 33 0 chr5 165154097 165154399 -34475751 + AluSx SINE Alu 1 312 0 3190 240 82 88 chr5 165154399 165155121 -34475029 - L2 LINE L2 -807 2506 1781 2036 125 0 0 chr5 165155121 165155438 -34474712 - AluSc SINE Alu 0 317 1 1796 107 90 14 chr5 165155447 165155737 -34474413 - AluSx SINE Alu 0 312 1 837 153 0 0 chr5 165155741 165155865 -34474285 - FLAM_C SINE Alu -7 126 3 3190 240 82 88 chr5 165155865 165156194 -34473956 - L2 LINE L2 -1543 1770 1421 322 233 217 8 chr5 165156214 165156343 -34473807 - MIR SINE MIR -79 183 28 200 179 54 36 chr5 165156577 165156633 -34473517 - MIR SINE MIR -132 130 74 2216 104 0 13 chr5 165158273 165158580 -34471570 + AluSx SINE Alu 1 303 -9 1907 151 7 3 chr5 165158874 165159178 -34470972 + AluJo SINE Alu 1 305 -7 949 206 145 7 chr5 165159305 165159581 -34470569 + MER113 DNA MER1_type? 100 413 -108 293 253 96 68 chr5 165159696 165159842 -34470308 + MIR3 SINE MIR 4 153 -55 1613 189 17 3 chr5 165160322 165160624 -34469526 - AluJb SINE Alu -6 306 1 584 258 38 38 chr5 165160940 165161126 -34469024 - MIR SINE MIR 0 262 77 2294 97 7 0 chr5 165161252 165161562 -34468588 - AluSq SINE Alu 0 313 2 465 187 32 49 chr5 165161893 165162016 -34468134 - FLAM_A SINE Alu -3 139 19 366 250 133 28 chr5 165162017 165162156 -34467994 - MIR SINE MIR -62 146 43 610 181 7 97 chr5 165162186 165162287 -34467863 + MER45A DNA AcHobo 2 86 -1495 2158 77 3 33 chr5 165162287 165162586 -34467564 - AluSx SINE Alu -17 295 6 610 181 7 97 chr5 165162586 165162639 -34467511 + MER45A DNA AcHobo 86 142 -36 32 26 0 0 chr5 165163526 165163565 -34466585 + AT_rich Low_complexity Low_complexity 1 39 0 1871 163 0 0 chr5 165163565 165163866 -34466284 + AluJo SINE Alu 1 301 -11 1705 170 0 23 chr5 165163866 165164166 -34465984 - AluJo SINE Alu -17 295 3 461 290 60 27 chr5 165164311 165164494 -34465656 - MIR3 SINE MIR -5 203 15 302 257 193 0 chr5 165164964 165165073 -34465077 - MIR SINE MIR -114 148 19 454 244 26 0 chr5 165165227 165165342 -34464808 + MIR SINE MIR 29 146 -62 1829 139 0 63 chr5 165165968 165166284 -34463866 + AluJb SINE Alu 1 296 -16 2100 121 13 3 chr5 165166323 165166630 -34463520 - AluSp SINE Alu -3 310 1 399 195 0 23 chr5 165166642 165166729 -34463421 - L2 LINE L2 -49 3264 3180 5508 123 27 15 chr5 165166750 165167718 -34462432 + MER11C LTR ERVK 1 1071 0 1679 229 128 18 chr5 165167724 165168419 -34461731 - L2 LINE L2 -151 3162 2375 326 253 12 12 chr5 165168509 165168592 -34461558 - L2 LINE L2 -54 3218 3136 190 253 103 23 chr5 165169209 165169296 -34460854 + MIR3 SINE MIR 6 99 -109 184 265 41 0 chr5 165169429 165169478 -34460672 + MIR SINE MIR 93 143 -65 1947 152 3 0 chr5 165170298 165170594 -34459556 + AluJb SINE Alu 1 297 -15 935 219 16 5 chr5 165170815 165171002 -34459148 + MER58A DNA MER1_type 1 189 -35 182 309 12 62 chr5 165171081 165171162 -34458988 - L2 LINE L2 -8 3305 3229 370 274 0 0 chr5 165171754 165171838 -34458312 + MER117 DNA MER1_type 111 194 -3 299 342 30 16 chr5 165171840 165172007 -34458143 - MIR SINE MIR -61 147 5 491 266 43 0 chr5 165172307 165172446 -34457704 + MER117 DNA MER1_type 53 197 0 356 280 47 0 chr5 165172447 165172554 -34457596 - MIR3 SINE MIR -48 160 49 202 306 14 14 chr5 165172978 165173050 -34457100 - MIR3 SINE MIR -52 156 85 543 165 21 0 chr5 165173354 165173451 -34456699 - U13 snRNA snRNA 0 104 6 2279 89 3 0 chr5 165173537 165173841 -34456309 - AluSg SINE Alu -5 305 1 1132 254 98 10 chr5 165173864 165174171 -34455979 - MER46C DNA MER2_type -4 334 1 192 299 94 51 chr5 165174196 165174313 -34455837 - MER5A DNA MER1_type -50 139 18 317 296 41 20 chr5 165175313 165175411 -34454739 - L2 LINE L2 0 3272 3173 2256 98 0 0 chr5 165175754 165176060 -34454090 - AluSg SINE Alu -4 306 1 638 223 98 23 chr5 165177284 165177499 -34452651 - MER113 DNA MER1_type? -110 411 181 1723 122 8 0 chr5 165177500 165177747 -34452403 - AluSx SINE Alu -62 250 2 309 306 88 20 chr5 165177761 165177908 -34452242 - MIR3 SINE MIR -48 160 4 1725 158 22 0 chr5 165178297 165178595 -34451555 - AluJo SINE Alu 0 304 1 2120 99 0 0 chr5 165178770 165179076 -34451074 - AluSx SINE Alu 0 306 1 317 331 65 0 chr5 165179677 165179801 -34450349 + L3 LINE CR1 974 1105 -472 1738 135 57 3 chr5 165179870 165180152 -34449998 - AluJb SINE Alu -15 297 1 428 274 51 38 chr5 165180571 165180728 -34449422 + MIR SINE MIR 104 262 0 252 86 0 0 chr5 165180735 165180770 -34449380 + (CAT)n Simple_repeat Simple_repeat 3 37 0 287 344 48 0 chr5 165181188 165181313 -34448837 + L3 LINE CR1 1122 1252 -325 180 320 88 121 chr5 165181799 165182164 -34447986 - L2 LINE L2 -5 3267 2915 884 192 6 12 chr5 165182221 165182416 -34447734 - FRAM SINE Alu 0 166 1 2158 96 20 0 chr5 165182604 165182905 -34447245 - AluSq SINE Alu -6 307 1 24 32 0 0 chr5 165184024 165184055 -34446095 + AT_rich Low_complexity Low_complexity 1 31 0 296 48 24 0 chr5 165184100 165184142 -34446008 + (TA)n Simple_repeat Simple_repeat 1 43 0 348 252 27 61 chr5 165184772 165184919 -34445231 - MIR3 SINE MIR -64 144 3 700 313 71 33 chr5 165186298 165186777 -34443373 - L1MC4 LINE L1 -54 7988 7492 311 277 109 8 chr5 165187237 165187356 -34442794 + MIR SINE MIR 23 153 -55 288 319 35 42 chr5 165188267 165188411 -34441739 + MIR3 SINE MIR 24 166 -42 * 347 272 79 26 chr5 165188409 165188523 -34441627 - MER5A DNA MER1_type -32 157 38 424 250 93 7 chr5 165188788 165188928 -34441222 + MER5A DNA MER1_type 38 189 0 350 336 28 7 chr5 165189601 165189784 -34440366 + L1MC4a LINE L1 5679 5864 -1944 1575 243 28 16 chr5 165190281 165190713 -34439437 + L1MC4 LINE L1 7375 7811 -231 29 60 0 0 chr5 165190965 165191015 -34439135 + AT_rich Low_complexity Low_complexity 1 50 0 1825 138 17 7 chr5 165191069 165191360 -34438790 - AluJb SINE Alu -18 294 1 512 204 35 0 chr5 165191360 165191473 -34438677 - MIR SINE MIR -71 191 75 661 293 60 4 chr5 165192156 165192388 -34437762 + MIR SINE MIR 4 248 -14 2136 222 145 9 chr5 165192611 165193002 -34437148 + L1MB4 LINE L1 3305 3641 -2505 2251 105 0 0 chr5 165193002 165193308 -34436842 + AluSx SINE Alu 1 306 -6 2136 222 145 9 chr5 165193308 165193556 -34436594 + L1MB4 LINE L1 3641 4031 -2115 994 118 0 0 chr5 165193559 165193695 -34436455 - AluJb SINE Alu -21 291 156 306 0 0 0 chr5 165193795 165193829 -34436321 + (TAA)n Simple_repeat Simple_repeat 3 36 0 2519 181 54 42 chr5 165193829 165194155 -34435995 + L1MB4 LINE L1 4410 4731 -1449 2090 113 0 0 chr5 165194155 165194471 -34435679 + AluSx SINE Alu 1 316 0 2519 181 54 42 chr5 165194471 165194894 -34435256 + L1MB4 LINE L1 4731 5147 -1033 1871 163 7 0 chr5 165194894 165195195 -34434955 + AluJb SINE Alu 1 303 -9 2519 181 54 42 chr5 165195195 165195482 -34434668 + L1MB4 LINE L1 5147 5429 -751 1864 128 57 7 chr5 165195482 165195778 -34434372 - AluSx SINE Alu -1 311 1 279 0 0 0 chr5 165195781 165195812 -34434338 + (TA)n Simple_repeat Simple_repeat 1 31 0 2519 181 54 42 chr5 165195812 165195944 -34434206 + L1MB4 LINE L1 5430 5559 -621 2519 166 13 17 chr5 165195944 165196420 -34433730 + L1MB4 LINE L1 5706 6179 -1 3175 158 80 6 chr5 165196458 165197085 -34433065 - L1MB7 LINE L1 -19 6165 5493 1899 168 0 0 chr5 165197085 165197395 -34432755 - AluJb SINE Alu -2 310 1 240 35 0 0 chr5 165197395 165197424 -34432726 + (TTA)n Simple_repeat Simple_repeat 2 30 0 770 209 0 0 chr5 165197427 165197561 -34432589 - FRAM SINE Alu -30 146 13 928 157 5 0 chr5 165197575 165197760 -34432390 - L1MB7 LINE L1 -686 5492 5307 367 337 37 25 chr5 165198606 165198769 -34431381 + MER5A DNA MER1_type 25 189 0 256 262 138 40 chr5 165199917 165200120 -34430030 - L1ME4a LINE L1 0 6121 5883 1812 146 0 59 chr5 165200120 165200328 -34429822 - AluSx SINE Alu -8 304 120 2155 125 0 3 chr5 165200328 165200639 -34429511 + AluSg SINE Alu 1 310 0 1812 146 0 59 chr5 165200639 165200753 -34429397 - AluSx SINE Alu -192 120 1 256 262 138 40 chr5 165200753 165200824 -34429326 - L1ME4a LINE L1 -238 5883 5820 349 186 39 88 chr5 165201255 165201320 -34428830 - L1ME4a LINE L1 0 6121 6061 2347 59 10 0 chr5 165201320 165201623 -34428527 + AluY SINE Alu 2 307 -4 349 186 39 88 chr5 165201623 165201659 -34428491 - L1ME4a LINE L1 -60 6061 6025 2620 23 0 0 chr5 165201773 165202072 -34428078 - AluY SINE Alu -12 299 1 243 317 55 28 chr5 165202073 165202218 -34427932 - MIR SINE MIR -100 162 14 420 298 140 13 chr5 165202277 165202512 -34427638 - L1ME4a LINE L1 -216 5905 5641 498 267 167 6 chr5 165203584 165203764 -34426386 + MIR SINE MIR 54 262 0 243 333 122 0 chr5 165204033 165204246 -34425904 - MIR SINE MIR -16 246 8 243 0 0 0 chr5 165204755 165204782 -34425368 + (TG)n Simple_repeat Simple_repeat 1 27 0 192 77 0 0 chr5 165204781 165204807 -34425343 + (CG)n Simple_repeat Simple_repeat 2 27 0 * 499 319 14 0 chr5 165204886 165205030 -34425120 + MIR SINE MIR 2 147 -115 295 267 0 0 chr5 165205245 165205331 -34424819 + GA-rich Low_complexity Low_complexity 4 89 0 261 230 138 0 chr5 165206066 165206153 -34423997 + MIR3 SINE MIR 5 103 -105 896 249 59 17 chr5 165206253 165206490 -34423660 + MLT2C1 LTR ERVL 28 274 -123 273 122 0 0 chr5 165206514 165206555 -34423595 - MLT2C1 LTR ERVL -7 390 350 447 278 0 0 chr5 165206595 165206771 -34423379 + (TG)n Simple_repeat Simple_repeat 2 177 0 934 256 58 72 chr5 165206792 165207221 -34422929 - MLT2B1 LTR ERVL -41 423 1 530 183 0 52 chr5 165207228 165207343 -34422807 + MLT2C2 LTR ERVL 356 464 0 2201 88 3 0 chr5 165207484 165207778 -34422372 + AluY SINE Alu 1 295 -16 6913 174 120 26 chr5 165208027 165209434 -34420716 + MER52A LTR ERV1 1 1539 -216 2927 201 65 26 chr5 165209855 165209972 -34420178 + L1M4 LINE L1 4068 4179 -1967 1655 168 0 49 chr5 165209972 165210300 -34419850 + AluJo SINE Alu 1 312 0 2927 201 65 26 chr5 165210300 165210994 -34419156 + L1M4 LINE L1 4179 4911 -1235 381 242 23 47 chr5 165211006 165211134 -34419016 + MIR SINE MIR 46 170 -92 539 165 0 0 chr5 165212114 165212199 -34417951 - AluJ/FLAM SINE Alu -226 86 2 271 330 40 31 chr5 165212233 165212460 -34417690 - L1ME4a LINE L1 -56 6065 5837 364 319 35 0 chr5 165212510 165212651 -34417499 - L1ME4a LINE L1 -364 5757 5612 450 0 0 0 chr5 165213439 165213489 -34416661 + (CA)n Simple_repeat Simple_repeat 2 51 0 214 254 16 32 chr5 165213570 165213633 -34416517 - MIR SINE MIR 0 262 201 385 273 7 91 chr5 165214422 165214565 -34415585 - MIR SINE MIR -29 233 103 201 333 0 0 chr5 165215410 165215488 -34414662 + L2 LINE L2 2976 3053 -219 507 160 0 0 chr5 165215572 165215666 -34414484 + (TGGA)n Simple_repeat Simple_repeat 1 94 0 244 285 101 57 chr5 165215691 165215849 -34414301 + L2 LINE L2 3149 3313 0 306 266 0 0 chr5 165215885 165216062 -34414088 + (TGGA)n Simple_repeat Simple_repeat 4 180 0 315 336 56 0 chr5 165216099 165216206 -34413944 + L1MC4 LINE L1 6588 6700 -1342 483 173 0 0 chr5 165216213 165216323 -34413827 + (TGGA)n Simple_repeat Simple_repeat 4 113 0 206 261 29 0 chr5 165216337 165216406 -34413744 + (TATG)n Simple_repeat Simple_repeat 1 71 0 433 237 12 0 chr5 165216419 165216588 -34413562 + (TGGA)n Simple_repeat Simple_repeat 4 174 0 287 286 101 8 chr5 165216687 165216806 -34413344 - MIR3 SINE MIR -5 203 74 196 307 168 0 chr5 165216856 165216957 -34413193 + MIR SINE MIR 36 153 -55 515 356 61 19 chr5 165218051 165218116 -34412034 - L1MC4a LINE L1 -1874 5934 5873 2173 110 0 7 chr5 165218116 165218416 -34411734 - AluSx SINE Alu -14 298 1 515 356 61 19 chr5 165218416 165218712 -34411438 - L1MC4a LINE L1 -1935 5873 5558 181 232 58 14 chr5 165219422 165219491 -34410659 - MIR SINE MIR -72 136 65 548 332 20 5 chr5 165219663 165219859 -34410291 + MIR SINE MIR 63 261 -1 1307 212 90 20 chr5 165220573 165220917 -34409233 + MER113 DNA MER1_type? 9 376 -145 2259 93 3 0 chr5 165220947 165221247 -34408903 + AluSp SINE Alu 13 313 0 817 130 51 28 chr5 165221249 165221426 -34408724 - MER53 DNA DNA -8 181 1 518 302 175 4 chr5 165221854 165222122 -34408028 - L3 LINE CR1 -5 1572 1259 234 376 0 17 chr5 165222397 165222514 -34407636 + MIR3 SINE MIR 43 157 -51 1697 176 7 0 chr5 165222514 165222810 -34407340 - AluJb SINE Alu -12 300 3 501 265 8 15 chr5 165223566 165223698 -34406452 + MIR3 SINE MIR 61 191 -17 366 233 44 63 chr5 165223745 165223904 -34406246 - MIR SINE MIR -51 211 56 367 288 39 39 chr5 165224373 165224526 -34405624 - MIR3 SINE MIR -18 190 38 250 264 64 79 chr5 165225313 165225453 -34404697 + MIR3 SINE MIR 23 160 -48 884 223 0 77 chr5 165226306 165226362 -34403788 + 7SLRNA srpRNA srpRNA 65 124 -196 2152 91 0 7 chr5 165226362 165226685 -34403465 - AluSp SINE Alu 0 321 1 2106 117 3 0 chr5 165226688 165226987 -34403163 - AluSx SINE Alu -10 302 3 884 223 0 77 chr5 165226987 165227145 -34403005 + 7SLRNA srpRNA srpRNA 126 267 -53 329 250 37 46 chr5 165227530 165227638 -34402512 + MIR SINE MIR 156 262 0 395 268 87 7 chr5 165228548 165228686 -34401464 + MIR SINE MIR 24 172 -90 208 295 67 57 chr5 165228734 165228839 -34401311 + L2 LINE L2 3150 3255 -17 206 216 0 39 chr5 165228858 165228909 -34401241 - MIR SINE MIR -12 250 202 288 253 35 23 chr5 165229090 165229177 -34400973 + MIR SINE MIR 40 127 -81 309 266 73 9 chr5 165229529 165229638 -34400512 + MIR3 SINE MIR 77 192 -16 357 302 30 47 chr5 165231267 165231436 -34398714 + MIR3 SINE MIR 32 197 -11 498 163 0 0 chr5 165231661 165231747 -34398403 - AluJ/FRAM SINE Alu 0 312 227 824 169 0 0 chr5 165231756 165231886 -34398264 - FLAM_C SINE Alu -6 137 8 425 19 19 0 chr5 165232050 165232104 -34398046 + (TG)n Simple_repeat Simple_repeat 1 55 0 184 231 204 9 chr5 165232768 165232876 -34397274 + MIR3 SINE MIR 3 131 -77 677 262 112 0 chr5 165233948 165234154 -34395996 + MIR SINE MIR 20 248 -14 225 213 0 21 chr5 165234127 165234174 -34395976 + L2 LINE L2 3267 3312 -1 * 518 251 0 9 chr5 165235290 165235632 -34394518 + (CA)n Simple_repeat Simple_repeat 1 338 0 197 219 14 0 chr5 165235680 165235753 -34394397 + (CA)n Simple_repeat Simple_repeat 1 74 0 532 268 153 4 chr5 165235871 165236099 -34394051 - MIR SINE MIR 0 262 1 196 306 0 0 chr5 165236200 165236262 -34393888 - MIR SINE MIR -84 124 63 690 291 71 28 chr5 165236651 165236933 -34393217 + L3 LINE CR1 791 1084 -493 240 329 0 0 chr5 165236934 165237007 -34393143 - L3 LINE CR1 -88 1489 1417 563 150 10 36 chr5 165237102 165237244 -34392906 - MIR SINE MIR -67 141 38 1510 153 36 66 chr5 165237251 165237585 -34392565 - MER33 DNA MER1_type 0 324 1 229 305 32 59 chr5 165238204 165238391 -34391759 + MER5A DNA MER1_type 2 183 -6 323 354 15 8 chr5 165238425 165238555 -34391595 - MIR SINE MIR -76 186 56 966 218 66 0 chr5 165238573 165238770 -34391380 + MER63A DNA MER1_type 1 210 0 2274 92 0 13 chr5 165238823 165239140 -34391010 - AluSq SINE Alu 0 313 1 226 317 81 0 chr5 165239348 165239471 -34390679 + MIR3 SINE MIR 24 156 -52 216 328 84 0 chr5 165239733 165239864 -34390286 - MIR3 SINE MIR -23 185 44 559 280 60 20 chr5 165239937 165240137 -34390013 + MIR SINE MIR 54 261 -1 197 224 103 0 chr5 165240204 165240262 -34389888 - MIR SINE MIR -58 204 141 682 253 75 0 chr5 165240698 165240884 -34389266 + L2 LINE L2 3114 3313 0 189 373 68 25 chr5 165240904 165241022 -34389128 - MIR SINE MIR -62 146 24 241 349 6 11 chr5 165241438 165241546 -34388604 - MIR SINE MIR -67 141 31 196 353 0 0 chr5 165241882 165241950 -34388200 - L2 LINE L2 0 3313 3246 220 269 0 15 chr5 165241955 165242022 -34388128 + CT-rich Low_complexity Low_complexity 2 67 0 908 256 74 4 chr5 165242050 165242292 -34387858 + MIR SINE MIR 3 261 -1 1978 142 6 3 chr5 165242312 165242623 -34387527 - AluJb SINE Alu 0 312 1 180 353 15 0 chr5 165243322 165243390 -34386760 - MIR SINE MIR -104 104 36 353 329 104 0 chr5 165243659 165243823 -34386327 - MIR SINE MIR -62 200 20 268 314 81 8 chr5 165244040 165244164 -34385986 + MIR3 SINE MIR 14 146 -62 418 264 74 0 chr5 165244428 165244549 -34385601 + MIR SINE MIR 13 142 -120 216 353 33 16 chr5 165245036 165245158 -34384992 - MIR3 SINE MIR 0 208 85 676 164 17 35 chr5 165245311 165245469 -34384681 + MIR SINE MIR 27 183 -63 279 352 37 0 chr5 165245865 165245973 -34384177 - MIR SINE MIR -60 148 37 342 317 158 28 chr5 165246002 165246425 -34383725 + L2 LINE L2 2155 2632 -682 201 360 0 0 chr5 165246513 165246588 -34383562 + L2 LINE L2 3197 3271 -1 * 539 295 88 23 chr5 165246583 165246800 -34383350 - MIR SINE MIR 0 262 32 2155 91 10 3 chr5 165246824 165247121 -34383029 - AluSq SINE Alu -12 301 3 242 263 105 0 chr5 165247394 165247489 -34382661 - MER113 DNA MER1_type? -415 106 2 184 296 56 0 chr5 165248684 165248755 -34381395 - L2 LINE L2 -39 3274 3200 354 288 48 8 chr5 165248826 165248951 -34381199 - MIR SINE MIR -59 149 20 256 298 41 41 chr5 165249613 165249784 -34380366 + MIR SINE MIR 24 191 -64 637 346 17 4 chr5 165249890 165250130 -34380020 - MIR SINE MIR -8 254 12 521 154 48 10 chr5 165250297 165250401 -34379749 - MIR SINE MIR -98 164 57 2348 97 0 0 chr5 165250435 165250826 -34379324 - AluSx SINE Alu 0 391 1 550 244 59 0 chr5 165251566 165251701 -34378449 - MIR3 SINE MIR -64 144 2 * 827 248 65 5 chr5 165251701 165251898 -34378252 - MIR SINE MIR -51 211 2 235 325 31 61 chr5 165253445 165253608 -34376542 - MER5B DNA MER1_type 0 178 21 202 114 29 0 chr5 165254181 165254216 -34375934 + (CGGGG)n Simple_repeat Simple_repeat 5 40 0 203 174 0 22 chr5 165254248 165254294 -34375856 + (CCCG)n Simple_repeat Simple_repeat 1 45 0 243 229 30 38 chr5 165254315 165254446 -34375704 + G-rich Low_complexity Low_complexity 5 134 0 2467 89 17 50 chr5 165254663 165255066 -34375084 + Tigger1 DNA MER2_type 949 1338 -1080 1568 192 34 0 chr5 165255099 165255396 -34374754 + AluJo SINE Alu 1 307 -5 1801 178 3 0 chr5 165255445 165255754 -34374396 + AluSx SINE Alu 3 312 0 307 287 8 25 chr5 165256690 165256812 -34373338 - AluJb SINE Alu -4 298 179 337 103 39 64 chr5 165256968 165257046 -34373104 - L1MB4 LINE L1 -118 6062 5987 818 96 30 0 chr5 165257097 165257232 -34372918 - L1MB4 LINE L1 -201 5979 5841 476 58 43 0 chr5 165257251 165257320 -34372830 - L1MB4 LINE L1 -6 6174 6103 564 322 143 19 chr5 165257515 165257763 -34372387 - L2 LINE L2 -24 3289 3073 2131 103 10 3 chr5 165257763 165258065 -34372085 - AluSq SINE Alu -9 304 1 564 322 143 19 chr5 165258065 165258248 -34371902 - L2 LINE L2 -240 3073 2804 1690 179 0 10 chr5 165258277 165258596 -34371554 - AluJb SINE Alu 0 312 1 27 0 0 0 chr5 165258829 165258856 -34371294 + AT_rich Low_complexity Low_complexity 1 27 0 1990 148 7 0 chr5 165258873 165259177 -34370973 - AluJb SINE Alu -6 306 1 764 174 25 0 chr5 165259193 165259314 -34370836 - FLAM_C SINE Alu -17 126 3 1918 98 73 7 chr5 165259423 165259709 -34370441 + AluSq SINE Alu 1 305 -8 1553 163 71 14 chr5 165259718 165260000 -34370150 + AluJb SINE Alu 1 298 -14 341 343 6 35 chr5 165260112 165260284 -34369866 - L1MC4 LINE L1 -1 8041 7875 203 174 0 22 chr5 165260493 165260539 -34369611 + (CCCG)n Simple_repeat Simple_repeat 1 45 0 234 237 0 53 chr5 165260560 165260691 -34369459 + G-rich Low_complexity Low_complexity 5 128 0 340 221 144 0 chr5 165260815 165260919 -34369231 + MIR3 SINE MIR 36 154 -54 193 184 41 20 chr5 165261718 165261767 -34368383 + MIR SINE MIR 73 122 -86 230 309 52 0 chr5 165262135 165262232 -34367918 + MIR3 SINE MIR 66 167 -41 187 310 28 0 chr5 165262541 165262612 -34367538 - MIR3 SINE MIR -47 161 89 325 204 0 97 chr5 165263155 165263258 -34366892 + MIR SINE MIR 37 129 -79 597 258 66 37 chr5 165263287 165263531 -34366619 - L2 LINE L2 -55 3258 3008 471 60 0 0 chr5 165263817 165263884 -34366266 + (TG)n Simple_repeat Simple_repeat 1 67 0 525 297 97 0 chr5 165264207 165264392 -34365758 + MIR SINE MIR 14 216 -46 2054 110 10 0 chr5 165264444 165264736 -34365414 + AluSx SINE Alu 1 295 -17 1584 154 75 10 chr5 165264822 165265114 -34365036 - AluJo SINE Alu -1 311 1 340 306 41 20 chr5 165265154 165265301 -34364849 + MIR3 SINE MIR 16 165 -43 727 206 155 23 chr5 165265534 165265753 -34364397 - MIR SINE MIR -14 248 1 237 191 31 15 chr5 165266083 165266160 -34363990 - MIR SINE MIR -49 159 81 229 211 19 0 chr5 165266643 165266695 -34363455 + MIR SINE MIR 71 123 -85 293 281 155 52 chr5 165266959 165267341 -34362809 - L2 LINE L2 -1 3271 2853 316 296 98 0 chr5 165267866 165267981 -34362169 + MIR SINE MIR 23 149 -70 499 272 158 19 chr5 165268000 165268158 -34361992 + MER5A DNA MER1_type 9 188 -1 327 274 145 0 chr5 165268893 165269010 -34361140 - L2 LINE L2 -2 3311 3178 196 263 40 40 chr5 165269096 165269172 -34360978 - MIR SINE MIR -77 131 56 331 219 14 0 chr5 165269474 165269547 -34360603 + MIR SINE MIR 80 153 -109 823 191 0 0 chr5 165269653 165269794 -34360356 + FLAM_C SINE Alu 2 142 -1 32 26 0 0 chr5 165269795 165269834 -34360316 + AT_rich Low_complexity Low_complexity 1 39 0 264 324 166 14 chr5 165269931 165270070 -34360080 - MER5A DNA MER1_type 0 189 30 332 283 0 44 chr5 165270084 165270197 -34359953 - MIR3 SINE MIR -88 120 13 1636 158 10 34 chr5 165270349 165270640 -34359510 + AluJb SINE Alu 1 284 -28 428 0 19 0 chr5 165270640 165270692 -34359458 + (CA)n Simple_repeat Simple_repeat 2 54 0 1973 134 20 0 chr5 165271276 165271575 -34358575 - AluSx SINE Alu -7 305 1 1015 247 125 24 chr5 165271619 165271996 -34358154 + L2 LINE L2 2899 3313 0 234 279 0 0 chr5 165272159 165272220 -34357930 + MER113 DNA MER1_type? 459 519 -2 343 326 29 7 chr5 165272223 165272361 -34357789 - MIR3 SINE MIR -49 159 19 429 307 45 23 chr5 165272758 165272934 -34357216 - MIR SINE MIR -3 259 80 574 242 49 54 chr5 165273041 165273264 -34356886 + MIR SINE MIR 26 247 -15 238 259 0 0 chr5 165273989 165274043 -34356107 + L2 LINE L2 3002 3055 -217 582 249 77 11 chr5 165275379 165275560 -34354590 + MIR SINE MIR 69 261 -1 552 240 45 3 chr5 165275760 165275920 -34354230 + MIR SINE MIR 32 196 -62 323 360 21 9 chr5 165276229 165276462 -34353688 - L2 LINE L2 -469 2845 2610 696 302 67 4 chr5 165277761 165277986 -34352164 + MIR SINE MIR 8 246 -16 550 290 70 0 chr5 165279035 165279221 -34350929 + MIR SINE MIR 64 262 0 546 279 133 40 chr5 165279226 165279344 -34350806 + L3 LINE CR1 1166 1272 -305 2209 98 0 0 chr5 165279344 165279641 -34350509 - AluSg SINE Alu -13 297 1 546 279 133 40 chr5 165279641 165279701 -34350449 + L3 LINE CR1 1272 1325 -252 2035 128 20 3 chr5 165279701 165279998 -34350152 + AluJb SINE Alu 1 302 -10 546 279 133 40 chr5 165279998 165280194 -34349956 + L3 LINE CR1 1325 1576 -1 458 225 27 0 chr5 165280419 165280530 -34349620 - MIR SINE MIR -118 144 31 289 270 11 22 chr5 165280924 165281013 -34349137 + MIR3 SINE MIR 110 197 -11 246 180 148 0 chr5 165281261 165281322 -34348828 - L2 LINE L2 0 3313 3244 421 339 23 11 chr5 165281481 165281658 -34348492 + MIR SINE MIR 22 200 -62 1775 162 3 29 chr5 165281857 165282171 -34347979 + AluJo SINE Alu 1 306 -6 1780 157 0 17 chr5 165282263 165282563 -34347587 + AluJb SINE Alu 18 312 0 1010 268 127 36 chr5 165282681 165282769 -34347381 - L2 LINE L2 0 3313 3234 2411 63 0 3 chr5 165282769 165283070 -34347080 + AluSq SINE Alu 1 300 -13 1010 268 127 36 chr5 165283070 165283422 -34346728 - L2 LINE L2 -79 3234 2833 327 276 80 43 chr5 165286208 165286371 -34343779 + MIR3 SINE MIR 2 170 -38 439 252 18 0 chr5 165287081 165287192 -34342958 + MIR SINE MIR 35 147 -61 184 294 52 78 chr5 165287152 165287305 -34342845 - L2 LINE L2 -1884 1430 1282 * 216 0 0 0 chr5 165287395 165287419 -34342731 + (GGCTG)n Simple_repeat Simple_repeat 5 28 0 237 302 278 0 chr5 165287528 165287654 -34342496 + MIR3 SINE MIR 33 193 -15 532 285 32 0 chr5 165288668 165288826 -34341324 + MIR3 SINE MIR 37 199 -9 215 279 38 38 chr5 165289232 165289311 -34340839 - L3 LINE CR1 -306 1271 1193 186 333 23 58 chr5 165289616 165289703 -34340447 + MIR3 SINE MIR 114 197 -11 297 0 0 0 chr5 165290161 165290194 -34339956 + (CA)n Simple_repeat Simple_repeat 1 33 0 363 286 7 54 chr5 165290222 165290369 -34339781 + MIR SINE MIR 99 238 -24 2476 71 3 0 chr5 165290654 165290948 -34339202 + AluSp SINE Alu 1 295 -18 328 220 42 93 chr5 165290958 165291076 -34339074 - L1MC4a LINE L1 -1634 6174 6063 2187 89 7 10 chr5 165291468 165291761 -34338389 - AluSx SINE Alu -20 292 1 842 150 50 74 chr5 165291777 165291980 -34338170 - MIR SINE MIR -1 261 68 318 26 0 0 chr5 165292547 165292586 -34337564 + (CCCCCG)n Simple_repeat Simple_repeat 6 44 0 394 259 24 72 chr5 165292992 165293158 -34336992 + MIR3 SINE MIR 7 164 -44 258 32 0 0 chr5 165293210 165293241 -34336909 + (TC)n Simple_repeat Simple_repeat 1 31 0 * 333 0 0 0 chr5 165293240 165293277 -34336873 + (CA)n Simple_repeat Simple_repeat 1 37 0 323 305 176 0 chr5 165293859 165293990 -34336160 + L3 LINE CR1 1423 1576 -1 443 253 11 89 chr5 165295137 165295327 -34334823 + MIR3 SINE MIR 14 188 -20 412 310 204 18 chr5 165295791 165296566 -34333584 + L2 LINE L2 2234 3196 -76 329 213 0 11 chr5 165296609 165296703 -34333447 + GA-rich Low_complexity Low_complexity 4 96 0 202 188 0 0 chr5 165296734 165296766 -34333384 + (TCCA)n Simple_repeat Simple_repeat 2 33 0 312 263 92 0 chr5 165296766 165296842 -34333308 - L2 LINE L2 0 3313 3231 339 315 0 0 chr5 165297726 165297818 -34332332 - MIR3 SINE MIR -48 160 69 204 250 240 0 chr5 165298533 165298633 -34331517 + MIR3 SINE MIR 84 207 -1 223 215 31 15 chr5 165299245 165299310 -34330840 + (GAGTG)n Simple_repeat Simple_repeat 5 70 0 2188 139 7 0 chr5 165299518 165299828 -34330322 + AluJo SINE Alu 1 312 0 296 375 17 8 chr5 165299847 165299967 -34330183 - MER5A DNA MER1_type -5 184 64 562 264 109 45 chr5 165300354 165300574 -34329576 - MIR SINE MIR -15 247 14 417 330 73 23 chr5 165300637 165300855 -34329295 - L1ME4a LINE L1 -32 6089 5861 689 217 115 0 chr5 165300951 165301168 -34328982 - LTR16A1 LTR ERVL 0 457 216 285 298 0 25 chr5 165301268 165301389 -34328761 - L1ME4a LINE L1 -387 5734 5617 830 181 0 0 chr5 165301393 165301531 -34328619 - FLAM_C SINE Alu -2 141 4 2382 88 7 0 chr5 165301559 165301864 -34328286 + AluSp SINE Alu 1 307 -6 2322 104 0 3 chr5 165302137 165302436 -34327714 + AluSx SINE Alu 1 298 -14 246 115 49 0 chr5 165302436 165302497 -34327653 + (TA)n Simple_repeat Simple_repeat 1 64 0 2049 139 13 7 chr5 165302561 165302863 -34327287 - AluSx SINE Alu -8 304 1 1712 254 90 28 chr5 165302980 165303556 -34326594 + L2 LINE L2 1223 1834 -1480 597 286 56 23 chr5 165303650 165304019 -34326131 - L1MC5 LINE L1 -180 7862 7366 1328 263 44 3 chr5 165304019 165304380 -34325770 + L2 LINE L2 1825 2200 -1114 348 273 91 8 chr5 165304775 165304907 -34325243 + L2 LINE L2 2207 2349 -965 2109 73 49 28 chr5 165305025 165305312 -34324838 + AluSg SINE Alu 1 293 -17 368 182 82 18 chr5 165305447 165305557 -34324593 + L1ME4a LINE L1 5967 6083 -38 2300 118 0 3 chr5 165305573 165305886 -34324264 - AluSx SINE Alu 0 312 1 913 160 142 36 chr5 165305908 165306133 -34324017 + L2 LINE L2 2321 2569 -745 401 314 39 5 chr5 165306137 165306341 -34323809 + L1MC/D LINE L1 5321 5531 -2277 209 286 48 71 chr5 165306591 165306717 -34323433 - MIR SINE MIR -65 143 21 189 0 0 0 chr5 165306826 165306847 -34323303 + (A)n Simple_repeat Simple_repeat 1 21 0 575 254 31 79 chr5 165307166 165307407 -34322743 - MIR SINE MIR 0 262 30 202 318 0 0 chr5 165308508 165308574 -34321576 - MIR SINE MIR -6 256 191 193 269 103 26 chr5 165308559 165308637 -34321513 + L2 LINE L2 3229 3312 -1 * 426 306 13 32 chr5 165308681 165308838 -34321312 - MIR SINE MIR -99 163 10 580 257 140 27 chr5 165309044 165309266 -34320884 + MIR SINE MIR 11 257 -5 2249 110 0 3 chr5 165309266 165309576 -34320574 - AluSg SINE Alu 0 310 2 414 222 189 55 chr5 165309787 165310062 -34320088 + L3 LINE CR1 984 1295 -282 2158 132 10 7 chr5 165310669 165310979 -34319171 + AluSx SINE Alu 1 311 -1 359 330 79 39 chr5 165311216 165311300 -34318850 - L1ME3 LINE L1 -273 5889 5810 2120 129 0 22 chr5 165311300 165311611 -34318539 - AluSq SINE Alu -9 304 1 359 330 79 39 chr5 165311611 165311984 -34318166 - L1ME3 LINE L1 -352 5810 5414 2558 74 0 0 chr5 165312204 165312503 -34317647 + AluSg SINE Alu 2 300 -10 269 318 79 24 chr5 165312955 165313081 -34317069 - MER5A DNA MER1_type 0 189 57 2206 117 3 0 chr5 165313089 165313387 -34316763 + AluSx SINE Alu 1 299 -13 285 261 151 17 chr5 165313492 165313611 -34316539 - L3 LINE CR1 -125 1452 1318 279 344 120 45 chr5 165313587 165314011 -34316139 - L2 LINE L2 0 3272 2817 * 192 77 0 0 chr5 165314214 165314240 -34315910 + (ATG)n Simple_repeat Simple_repeat 1 26 0 451 220 76 8 chr5 165314285 165314403 -34315747 - MIR SINE MIR -55 207 82 617 290 24 0 chr5 165314503 165314672 -34315478 + MIR SINE MIR 8 180 -82 23 0 0 0 chr5 165315277 165315300 -34314850 + AT_rich Low_complexity Low_complexity 1 23 0 2360 113 3 0 chr5 165315638 165315947 -34314203 + AluSx SINE Alu 1 310 -2 554 258 156 26 chr5 165316077 165316379 -34313771 + L1ME3A LINE L1 5821 6161 -9 473 191 129 20 chr5 165316401 165316548 -34313602 + L1ME2 LINE L1 1366 1528 -5002 315 339 113 16 chr5 165316581 165316767 -34313383 + L1ME2 LINE L1 1940 2143 -4578 368 283 0 104 chr5 165316779 165316925 -34313225 + L1ME2 LINE L1 2460 2579 -3961 2495 73 3 0 chr5 165316925 165317226 -34312924 + AluY SINE Alu 1 302 -9 368 283 0 104 chr5 165317226 165317291 -34312859 + L1ME2 LINE L1 2579 2649 -3891 898 158 122 0 chr5 165317305 165317469 -34312681 + AluJo SINE Alu 123 306 -6 299 224 12 0 chr5 165317486 165317571 -34312579 + L1ME2 LINE L1 2698 2783 -3757 328 235 37 12 chr5 165317751 165317832 -34312318 + L1 LINE L1 5137 5219 -927 344 164 50 100 chr5 165317832 165317972 -34312178 + L1MC3 LINE L1 6969 7101 -684 308 294 20 10 chr5 165317978 165318080 -34312070 + MLT1F1 LTR MaLR 45 147 -420 1780 247 82 19 chr5 165318080 165318486 -34311664 + L1MD3 LINE L1 7329 7708 -334 1958 147 3 10 chr5 165318486 165318786 -34311364 - AluJb SINE Alu -1 311 14 1780 247 82 19 chr5 165318786 165318927 -34311223 + L1MD3 LINE L1 7708 7839 -203 2244 124 0 16 chr5 165318927 165319241 -34310909 + AluSg SINE Alu 2 310 0 2810 32 0 0 chr5 165319243 165319554 -34310596 + AluY SINE Alu 1 311 0 1780 247 82 19 chr5 165319554 165319675 -34310475 + L1MD3 LINE L1 7839 8042 0 2512 247 93 25 chr5 165319699 165320800 -34309350 + L1ME2 LINE L1 3898 5072 -1468 1815 141 58 9 chr5 165320808 165321154 -34308996 + MLT1C LTR MaLR 93 467 0 649 221 33 71 chr5 165321173 165321239 -34308911 + L1ME2 LINE L1 5530 5597 -943 2382 110 3 0 chr5 165321239 165321549 -34308601 + AluSx SINE Alu 1 311 -1 649 221 33 71 chr5 165321549 165321722 -34308428 + L1ME2 LINE L1 5597 5760 -780 1081 171 0 0 chr5 165321723 165321887 -34308263 + FRAM SINE Alu 1 164 -2 2802 207 77 45 chr5 165321922 165322190 -34307960 + L1ME2 LINE L1 5746 6004 -554 2331 95 0 0 chr5 165322190 165322486 -34307664 - AluSx SINE Alu -16 296 1 2802 207 77 45 chr5 165322486 165322995 -34307155 + L1ME2 LINE L1 6004 6548 -10 926 131 186 5 chr5 165323067 165323343 -34306807 + MER47A DNA MER2_type 4 366 0 330 248 35 93 chr5 165323346 165323424 -34306726 + L1MC4 LINE L1 7829 7910 -132 1916 136 0 73 chr5 165323424 165323740 -34306410 + AluSx SINE Alu 1 293 -19 330 248 35 93 chr5 165323740 165323887 -34306263 + L1MC4 LINE L1 7910 8041 -1 2393 103 0 13 chr5 165323964 165324275 -34305875 + AluSg SINE Alu 1 307 -3 290 328 57 86 chr5 165324478 165324792 -34305358 + L2 LINE L2 2304 2608 -706 399 276 61 0 chr5 165324875 165324973 -34305177 - MIR SINE MIR -148 114 11 707 199 8 8 chr5 165324980 165325111 -34305039 + FLAM_C SINE Alu 3 133 0 356 250 293 7 chr5 165325187 165325327 -34304823 - MLT1J2 LTR MaLR -8 442 263 2337 105 0 0 chr5 165326009 165326304 -34303846 + AluSc SINE Alu 1 295 -14 741 174 0 0 chr5 165326378 165326493 -34303657 - FLAM_A SINE Alu -15 127 13 310 281 12 0 chr5 165326529 165326611 -34303539 - MIR SINE MIR -27 235 153 216 355 0 13 chr5 165328563 165328639 -34301511 - MER5C DNA MER1_type -248 76 2 253 329 38 0 chr5 165329546 165329625 -34300525 + MIR SINE MIR 167 248 -14 190 339 9 80 chr5 165329759 165329871 -34300279 + L2 LINE L2 3137 3240 -32 491 204 0 0 chr5 165330626 165330714 -34299436 + MER58 DNA MER1_type 128 2420 0 1856 138 47 7 chr5 165331082 165331357 -34298793 - AluJb SINE Alu -26 286 1 2011 154 13 16 chr5 165333181 165333493 -34296657 + AluJb SINE Alu 1 311 -1 444 181 0 0 chr5 165333950 165334022 -34296128 + FLAM_C SINE Alu 37 108 -35 855 148 0 0 chr5 165334055 165334183 -34295967 + FRAM SINE Alu 39 166 -10 227 250 0 0 chr5 165334754 165334802 -34295348 - MIR3 SINE MIR -7 201 154 919 129 0 8 chr5 165335539 165335671 -34294479 + FLAM_C SINE Alu 1 131 -12 219 296 0 0 chr5 165336095 165336149 -34294001 + MIR SINE MIR 31 84 -124 221 327 18 0 chr5 165336155 165336210 -34293940 + MIR SINE MIR 33 88 -174 428 214 96 79 chr5 165337453 165337471 -34292679 - MER53 DNA DNA 0 189 173 300 27 0 0 chr5 165337471 165337508 -34292642 + (TC)n Simple_repeat Simple_repeat 2 38 0 219 114 0 0 chr5 165337510 165337545 -34292605 + (CA)n Simple_repeat Simple_repeat 1 35 0 428 214 96 79 chr5 165337545 165337701 -34292449 - MER53 DNA DNA -16 173 9 2062 219 48 7 chr5 165338094 165338556 -34291594 - L1ME1 LINE L1 -102 6859 6379 340 219 45 10 chr5 165338559 165338687 -34291463 - L1ME1 LINE L1 -5022 2100 1807 2163 120 16 0 chr5 165338689 165338998 -34291152 - LTR62 LTR ERVK -4 715 402 328 118 44 44 chr5 165339235 165339303 -34290847 + MER4A-int LTR ERV1 6529 6596 -2 1079 120 11 17 chr5 165339308 165339483 -34290667 + MER4A LTR ERV1 1 174 -490 908 291 14 7 chr5 165339869 165340144 -34290006 - PABL_B-int LTR ERV1 -439 6683 6407 933 128 13 19 chr5 165340209 165340365 -34289785 - MER4A LTR ERV1 -509 155 1 1665 169 48 7 chr5 165340381 165340671 -34289479 - AluJo SINE Alu -10 302 1 4108 103 35 28 chr5 165340699 165341137 -34289013 - MER39B LTR ERV1 0 653 207 2504 82 0 0 chr5 165341137 165341440 -34288710 - AluSg SINE Alu -7 303 1 4108 103 35 28 chr5 165341440 165341649 -34288501 - MER39B LTR ERV1 -446 207 1 1252 131 0 0 chr5 165341691 165341866 -34288284 - AluSx SINE Alu -137 175 1 1301 223 109 56 chr5 165341882 165341995 -34288155 - L1ME1 LINE L1 -5132 1291 1186 2273 122 3 0 chr5 165341995 165342306 -34287844 - AluSp SINE Alu -1 312 1 1301 223 109 56 chr5 165342306 165342640 -34287510 - L1ME1 LINE L1 -5237 1186 820 1449 248 141 51 chr5 165342641 165342783 -34287367 - L2 LINE L2 -1116 2198 2070 4263 137 92 16 chr5 165342783 165343511 -34286639 - LTR39 LTR ERV1 0 783 1 1449 248 141 51 chr5 165343511 165343742 -34286408 - L2 LINE L2 -1244 2070 1861 2410 72 0 10 chr5 165343742 165344048 -34286102 - AluY SINE Alu -8 303 1 1449 248 141 51 chr5 165344048 165344080 -34286070 - L2 LINE L2 -1453 1861 1833 737 205 0 0 chr5 165344080 165344197 -34285953 - FLAM_C SINE Alu -16 117 1 1449 248 141 51 chr5 165344197 165344479 -34285671 - L2 LINE L2 -1481 1833 1447 1664 163 0 46 chr5 165347543 165347849 -34282301 - AluSx SINE Alu -13 299 8 302 335 126 9 chr5 165347908 165348138 -34282012 - L1MC4a LINE L1 -1904 5904 5648 2291 113 0 0 chr5 165348165 165348466 -34281684 - AluSx SINE Alu -11 301 1 922 208 0 0 chr5 165348469 165348628 -34281522 - FRAM SINE Alu -17 159 1 217 247 35 82 chr5 165349278 165349363 -34280787 + MER5A DNA MER1_type 46 126 -63 2346 115 0 0 chr5 165349468 165349780 -34280370 - AluSx SINE Alu 0 312 1 2080 112 14 3 chr5 165349871 165350165 -34279985 + AluSx SINE Alu 1 297 -15 713 219 98 69 chr5 165350181 165350422 -34279728 + LTR50 LTR ERVL 1 252 -543 1578 180 24 10 chr5 165350422 165350711 -34279439 - AluJb SINE Alu -19 293 1 713 219 98 69 chr5 165350711 165350743 -34279407 + LTR50 LTR ERVL 252 282 -513 666 234 56 56 chr5 165350778 165351081 -34279069 + LTR50 LTR ERVL 451 753 -42 260 192 162 10 chr5 165351260 165351359 -34278791 + L1ME4a LINE L1 5807 5920 -201 485 192 131 0 chr5 165351375 165351505 -34278645 + L1ME4a LINE L1 5975 6121 0 2178 118 0 7 chr5 165351934 165352240 -34277910 - AluSg SINE Alu -6 304 1 2100 108 0 3 chr5 165352678 165352966 -34277184 + AluSc SINE Alu 5 291 -18 2118 110 7 3 chr5 165353292 165353582 -34276568 - AluSx SINE Alu -19 293 3 244 332 126 50 chr5 165354002 165354240 -34275910 - L2 LINE L2 -593 2721 2466 2059 149 0 3 chr5 165354847 165355156 -34274994 - AluJb SINE Alu -4 308 1 24 0 0 0 chr5 165355850 165355874 -34274276 + AT_rich Low_complexity Low_complexity 1 24 0 520 234 114 24 chr5 165356071 165356238 -34273912 + MIR SINE MIR 80 261 -1 195 321 18 0 chr5 165356443 165356499 -34273651 - MER5A DNA MER1_type -49 140 84 1839 162 14 3 chr5 165356518 165356814 -34273336 - AluJb SINE Alu -13 299 1 216 228 99 59 chr5 165357070 165357171 -34272979 - MIR SINE MIR -59 203 99 413 306 54 83 chr5 165357247 165357620 -34272530 - L1MC/D LINE L1 -1988 5820 5459 1694 199 0 3 chr5 165357865 165358162 -34271988 - AluJo SINE Alu -16 296 1 536 294 41 49 chr5 165359253 165359498 -34270652 - MIR SINE MIR -6 256 14 927 164 0 0 chr5 165359513 165359653 -34270497 - FRAM SINE Alu -26 150 11 605 271 162 16 chr5 165359833 165360147 -34270003 - L1MC4a LINE L1 -1874 5934 5575 304 237 32 11 chr5 165360215 165360337 -34269813 - L1MC4a LINE L1 -722 5442 5319 692 255 93 32 chr5 165360376 165360784 -34269366 - L1MC4a LINE L1 -891 5255 4823 2540 59 0 3 chr5 165360904 165361209 -34268941 + AluY SINE Alu 1 304 -7 276 284 128 0 chr5 165361267 165361376 -34268774 - L1MC/D LINE L1 -2112 5696 5574 32 26 0 0 chr5 165361395 165361434 -34268716 + AT_rich Low_complexity Low_complexity 1 39 0 492 246 80 68 chr5 165361443 165361707 -34268443 - L1MC/D LINE L1 -2922 3224 2958 243 200 33 0 chr5 165361714 165361774 -34268376 - L1MC/D LINE L1 -3321 2825 2764 868 114 8 0 chr5 165361936 165362059 -34268091 - AluSp/q SINE Alu -16 297 174 28 48 0 0 chr5 165363438 165363480 -34266670 + AT_rich Low_complexity Low_complexity 1 42 0 2816 16 0 0 chr5 165363523 165363832 -34266318 + AluY SINE Alu 1 309 -2 1025 262 159 32 chr5 165364299 165364890 -34265260 - L1MC/D LINE L1 -3371 2775 2110 1441 142 10 73 chr5 165364908 165365210 -34264940 - AluJb SINE Alu -16 296 14 301 193 34 34 chr5 165365283 165365371 -34264779 - L1MC5 LINE L1 -44 7917 7830 261 122 73 0 chr5 165365371 165365412 -34264738 + LTR23 LTR ERV1 318 361 -76 678 216 29 61 chr5 165365442 165365637 -34264513 - L1MC5 LINE L1 -116 7845 7658 1175 166 0 6 chr5 165365637 165365812 -34264338 - FAM SINE Alu -1 174 1 678 216 29 61 chr5 165365812 165365861 -34264289 - L1MC5 LINE L1 -303 7658 7609 230 250 18 0 chr5 165365880 165365936 -34264214 + CT-rich Low_complexity Low_complexity 4 60 0 335 203 68 0 chr5 165365938 165366012 -34264138 - L1MC5 LINE L1 -385 7576 7498 849 192 105 0 chr5 165366028 165366200 -34263950 - MER3 DNA MER1_type -18 191 2 413 174 54 0 chr5 165366208 165366300 -34263850 - L1MC5 LINE L1 -462 7499 7403 474 277 78 0 chr5 165366408 165366549 -34263601 + MIR SINE MIR 101 252 -10 216 0 0 0 chr5 165367196 165367220 -34262930 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2326 86 0 3 chr5 165368186 165368477 -34261673 - AluSx SINE Alu -22 290 1 581 218 90 26 chr5 165368556 165368712 -34261438 + MIR SINE MIR 94 259 -3 27 29 0 0 chr5 165369868 165369902 -34260248 + AT_rich Low_complexity Low_complexity 1 34 0 1086 176 11 6 chr5 165369939 165370121 -34260029 + AluJ SINE Alu 5 187 -125 17636 145 44 14 chr5 165370131 165374930 -34255220 + L1PB1 LINE L1 3 5063 -1804 1922 144 46 0 chr5 165374930 165375215 -34254935 + AluSx SINE Alu 1 298 -14 17636 145 44 14 chr5 165375215 165377064 -34253086 + L1PB1 LINE L1 5063 6855 -12 913 121 0 0 chr5 165377080 165377204 -34252946 + AluJ SINE Alu 180 303 -9 449 211 0 0 chr5 165377415 165377486 -34252664 - FRAM/FAM SINE Alu -99 77 7 1889 174 0 3 chr5 165377501 165377800 -34252350 - AluJo SINE Alu -14 298 1 1069 183 18 36 chr5 165378372 165378596 -34251554 - MIR SINE MIR -34 228 9 227 299 0 0 chr5 165378611 165378678 -34251472 + L1ME LINE L1 5067 5133 -1013 235 217 0 0 chr5 165378723 165378769 -34251381 + L1ME1 LINE L1 4902 4947 -1199 44308 35 11 1 chr5 165378856 165384950 -34245200 + L1PA3 LINE L1 4 6155 0 2452 187 80 142 chr5 165384970 165385533 -34244617 + L1ME1 LINE L1 5004 5565 -601 858 153 0 28 chr5 165385533 165385677 -34244473 + FLAM_C SINE Alu 1 140 -3 2452 187 80 142 chr5 165385677 165386240 -34243910 + L1ME1 LINE L1 5565 6161 -5 735 287 97 23 chr5 165386258 165386610 -34243540 + L1ME LINE L1 5423 5800 -362 21 0 0 0 chr5 165388159 165388180 -34241970 + AT_rich Low_complexity Low_complexity 1 21 0 637 283 113 48 chr5 165388403 165388870 -34241280 - L1ME LINE L1 -418 5703 5195 2425 54 7 3 chr5 165388870 165389164 -34240986 - AluY SINE Alu -16 295 1 637 283 113 48 chr5 165389164 165389219 -34240931 - L1ME LINE L1 -926 5195 5145 302 206 106 57 chr5 165389798 165389939 -34240211 - HAL1b LINE L1 -7 1341 1194 318 273 0 50 chr5 165390345 165390444 -34239706 + MIR SINE MIR 133 226 -36 5179 150 52 65 chr5 165390557 165390685 -34239465 + L1MC3 LINE L1 6685 6813 -972 1795 162 21 3 chr5 165390685 165390975 -34239175 + AluJb SINE Alu 1 295 -17 5179 150 52 65 chr5 165390975 165391960 -34238190 + L1MC3 LINE L1 6813 7784 -1 2215 104 7 7 chr5 165392039 165392338 -34237812 - AluSc SINE Alu -10 299 1 324 244 125 95 chr5 165393847 165394015 -34236135 + MIR SINE MIR 30 202 -60 2410 140 75 5 chr5 165395627 165396040 -34234110 - MER83 LTR ERV1 -6 442 1 682 286 69 16 chr5 165396189 165396434 -34233716 - MIR SINE MIR -2 260 3 299 258 30 83 chr5 165396927 165397059 -34233091 + LTR16C LTR ERVL 289 413 -78 311 259 116 20 chr5 165397118 165397265 -34232885 - L1ME LINE L1 -479 5642 5482 226 326 23 0 chr5 165397282 165397368 -34232782 + MIR SINE MIR 66 153 -109 2433 87 0 3 chr5 165397986 165398296 -34231854 - AluY SINE Alu -2 309 1 510 165 22 0 chr5 165398298 165398389 -34231761 - MER31A LTR ERV1 -392 93 1 339 214 43 0 chr5 165398485 165398555 -34231595 + L2 LINE L2 3199 3271 -1 1113 266 140 12 chr5 165398653 165399207 -34230943 - L2 LINE L2 -198 3115 2501 236 237 11 54 chr5 165399644 165399737 -34230413 + MIR SINE MIR 172 260 -2 313 254 42 0 chr5 165399749 165399820 -34230330 - MIR3 SINE MIR -51 157 84 1727 212 73 84 chr5 165400017 165400208 -34229942 + MLT1F LTR MaLR 2 194 -348 324 0 0 0 chr5 165400208 165400244 -34229906 + (CA)n Simple_repeat Simple_repeat 2 37 0 1727 212 73 84 chr5 165400244 165400575 -34229575 + MLT1F LTR MaLR 194 518 -24 768 277 125 43 chr5 165400737 165401114 -34229036 - LTR33 LTR ERVL 0 521 97 1593 259 88 32 chr5 165401114 165401578 -34228572 - LTR16C LTR ERVL 0 491 2 768 277 125 43 chr5 165401578 165401665 -34228485 - LTR33 LTR ERVL -424 97 19 457 305 85 6 chr5 165401983 165402160 -34227990 + MIR SINE MIR 62 252 -10 430 327 7 13 chr5 165402913 165403063 -34227087 - MIR3 SINE MIR -15 193 45 530 258 25 38 chr5 165403170 165403329 -34226821 - L3 LINE CR1 -112 1465 1309 534 120 0 27 chr5 165403433 165403508 -34226642 + AluJ/FRAM SINE Alu 218 290 -22 1641 163 10 36 chr5 165403508 165403775 -34226375 + MLT2D LTR ERVL 116 376 -38 423 0 0 0 chr5 165403775 165403822 -34226328 + (CA)n Simple_repeat Simple_repeat 2 48 0 1641 163 10 36 chr5 165403822 165403861 -34226289 + MLT2D LTR ERVL 376 414 0 186 43 0 0 chr5 165403944 165403967 -34226183 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 590 273 52 21 chr5 165404085 165404279 -34225871 + MIR3 SINE MIR 4 203 -5 385 290 60 38 chr5 165404395 165404578 -34225572 - MIR SINE MIR -27 235 49 802 156 8 0 chr5 165404733 165404861 -34225289 + AluJo SINE Alu 6 134 -178 1018 179 127 171 chr5 165404864 165405344 -34224806 - LTR37B LTR ERV1 -4 464 6 1895 184 32 11 chr5 165405588 165405963 -34224187 - L1MB8 LINE L1 -15 6163 5781 957 202 81 0 chr5 165406000 165406223 -34223927 - L1MB8 LINE L1 -2259 3887 3647 575 89 89 0 chr5 165406223 165406313 -34223837 + MER4A LTR ERV1 1 98 -566 2234 110 0 19 chr5 165406326 165406636 -34223514 + AluSx SINE Alu 2 305 -7 1617 140 178 71 chr5 165406642 165407007 -34223143 + MER4A LTR ERV1 261 664 0 4136 232 47 23 chr5 165407007 165408246 -34221904 - L1MB8 LINE L1 -2511 3635 2362 2018 159 0 0 chr5 165408246 165408547 -34221603 - AluSx SINE Alu -11 301 1 4136 232 47 23 chr5 165408547 165408597 -34221553 - L1MB8 LINE L1 -3784 2362 2315 1498 109 0 14 chr5 165408601 165408811 -34221339 - Tigger3(Golem) DNA MER2_type -2758 271 65 916 184 3 103 chr5 165408817 165409201 -34220949 - L1M1 LINE L1 -3816 3749 3406 471 275 68 104 chr5 165409209 165409338 -34220812 - LTR49-int LTR ERV1 -978 5353 5221 2203 151 132 0 chr5 165409338 165409716 -34220434 + MSTA LTR MaLR 1 428 0 471 275 68 104 chr5 165409716 165410230 -34219920 - LTR49-int LTR ERV1 -1110 5221 4733 1066 97 0 0 chr5 165410752 165410886 -34219264 + AluSq/x SINE Alu 1 134 -179 264 30 0 0 chr5 165410886 165410919 -34219231 + (TA)n Simple_repeat Simple_repeat 2 34 0 2085 124 0 7 chr5 165410922 165411220 -34218930 - AluSx SINE Alu -10 302 7 284 280 200 36 chr5 165411532 165411757 -34218393 + L2 LINE L2 3052 3313 0 3460 159 18 8 chr5 165411758 165412353 -34217797 - MER6A DNA MER2_type 0 605 -4 2168 98 3 0 chr5 165412620 165412933 -34217217 - AluSx SINE Alu 0 314 1 779 23 0 0 chr5 165413502 165413590 -34216560 + AluSg/x SINE Alu 217 304 -6 204 280 128 8 chr5 165414305 165414430 -34215720 - MIR SINE MIR -77 185 46 282 323 31 25 chr5 165414480 165414641 -34215509 - MIR3 SINE MIR -25 183 22 215 269 15 15 chr5 165415437 165415504 -34214646 + MIR SINE MIR 17 83 -125 395 287 47 16 chr5 165415686 165415815 -34214335 + L2 LINE L2 3181 3313 0 247 237 237 59 chr5 165416131 165416266 -34213884 + MIR3 SINE MIR 3 161 -47 1196 222 17 0 chr5 165416967 165417197 -34212953 - MIR SINE MIR -12 250 17 239 294 0 0 chr5 165417200 165417272 -34212878 + MIR SINE MIR 32 103 -105 280 184 35 126 chr5 165417580 165417667 -34212483 - MLT1D LTR MaLR -426 79 1 549 246 123 128 chr5 165418807 165419246 -34210904 - L2 LINE L2 0 3313 2877 1902 99 0 0 chr5 165419910 165420153 -34209997 - AluSc SINE Alu -7 302 60 703 223 12 42 chr5 165420196 165420362 -34209788 - MIR SINE MIR -21 241 81 366 200 0 0 chr5 165420456 165420521 -34209629 - L1MEd LINE L1 -3584 3060 2996 311 245 98 33 chr5 165420554 165420738 -34209412 - L1MEd LINE L1 -3753 2891 2696 284 246 184 50 chr5 165420740 165421017 -34209133 - L1MEd LINE L1 -4130 2695 2382 2314 116 3 0 chr5 165421079 165421382 -34208768 - AluSx SINE Alu -8 304 1 798 272 59 52 chr5 165421409 165421567 -34208583 - L1MEd LINE L1 -4803 2022 1866 2300 132 0 0 chr5 165421567 165421878 -34208272 - AluSx SINE Alu -1 311 1 798 272 59 52 chr5 165421878 165422277 -34207873 - L1MEd LINE L1 -4959 1866 1471 1736 179 10 7 chr5 165422277 165422574 -34207576 - AluJb SINE Alu -6 306 9 798 272 59 52 chr5 165422574 165422922 -34207228 - L1MEd LINE L1 -5354 1471 1039 323 281 88 0 chr5 165423273 165423387 -34206763 - L1MEd LINE L1 -5944 690 567 272 272 241 19 chr5 165423541 165423703 -34206447 + MIR SINE MIR 5 202 -60 31 26 0 0 chr5 165424117 165424155 -34205995 + AT_rich Low_complexity Low_complexity 1 38 0 1884 131 4 0 chr5 165424384 165424659 -34205491 + AluJb SINE Alu 37 312 0 181 250 0 0 chr5 165425516 165425560 -34204590 - MIR3 SINE MIR -6 202 159 196 176 0 0 chr5 165426130 165426164 -34203986 + MIR SINE MIR 110 143 -65 316 341 49 0 chr5 165426696 165426819 -34203331 - MER5B DNA MER1_type 0 178 50 236 198 47 81 chr5 165427212 165427298 -34202852 - L1MC/D LINE L1 -1886 5922 5840 24 0 0 0 chr5 165427314 165427338 -34202812 + AT_rich Low_complexity Low_complexity 1 24 0 3096 142 8 12 chr5 165427348 165427855 -34202295 - L1MA7 LINE L1 -235 6056 5552 225 132 0 0 chr5 165427923 165427961 -34202189 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 297 276 129 0 chr5 165427965 165428081 -34202069 - L1MC/D LINE L1 -2000 5808 5678 1818 199 46 73 chr5 165428320 165428544 -34201606 + MER119 DNA MER1_type 5 234 -349 1671 177 7 31 chr5 165428544 165428838 -34201312 - AluJo SINE Alu -25 287 1 1818 199 46 73 chr5 165428838 165429090 -34201060 + MER119 DNA MER1_type 234 468 -115 256 208 0 0 chr5 165429091 165429144 -34201006 - L1 LINE L1 -1648 4498 4446 * 5333 154 6 3 chr5 165429138 165430681 -34199469 + L1PB1 LINE L1 4462 6009 -142 651 209 30 0 chr5 165430697 165430831 -34199319 - MER119 DNA MER1_type -5 578 441 209 293 203 24 chr5 165431020 165431143 -34199007 + MIR SINE MIR 7 151 -111 406 191 18 64 chr5 165431171 165431281 -34198869 + MIR SINE MIR 146 250 -12 500 255 36 51 chr5 165431703 165431899 -34198251 + MIR SINE MIR 28 220 -42 295 315 76 68 chr5 165432841 165433250 -34196900 - L2 LINE L2 -835 2479 2068 258 32 0 0 chr5 165433285 165433316 -34196834 + (TA)n Simple_repeat Simple_repeat 1 31 0 1015 113 0 0 chr5 165433316 165433449 -34196701 - AluSq/x SINE Alu -180 133 1 1866 185 33 28 chr5 165433592 165433746 -34196404 - MLT1A1 LTR MaLR 0 365 213 2373 79 3 3 chr5 165433746 165434049 -34196101 - AluSp SINE Alu -10 303 1 1866 185 33 28 chr5 165434049 165434257 -34195893 - MLT1A1 LTR MaLR -152 213 1 1899 109 53 0 chr5 165434807 165435097 -34195053 + AluSg SINE Alu 1 304 0 693 152 0 0 chr5 165435383 165435482 -34194668 + AluSx SINE Alu 33 131 -181 403 87 29 29 chr5 165436054 165436123 -34194027 + MADE1 DNA Mariner 12 80 0 298 178 0 0 chr5 165436641 165436686 -34193464 - MER5A DNA MER1_type 0 189 145 1228 46 0 0 chr5 165436686 165436837 -34193313 - AluY SINE Alu -18 293 143 276 293 13 13 chr5 165436838 165436913 -34193237 - MER5A DNA MER1_type -56 133 59 396 318 21 32 chr5 165437419 165437608 -34192542 + MER5A DNA MER1_type 1 187 -2 262 257 10 40 chr5 165437707 165437808 -34192342 - L3 LINE CR1 -249 1328 1231 604 279 27 16 chr5 165437889 165438072 -34192078 + MIR SINE MIR 25 209 -53 355 265 121 0 chr5 165438115 165438247 -34191903 + MIR SINE MIR 114 261 -1 287 322 127 39 chr5 165438862 165439067 -34191083 + MIR SINE MIR 30 252 -10 898 145 0 0 chr5 165439586 165439710 -34190440 - FLAM_C SINE Alu -19 124 1 207 0 0 0 chr5 165439817 165439840 -34190310 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1407 228 128 33 chr5 165440150 165440610 -34189540 + MLT1D LTR MaLR 2 505 0 1230 100 0 12 chr5 165440681 165440851 -34189299 + AluSx SINE Alu 132 299 -13 318 50 0 0 chr5 165441111 165441151 -34188999 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr5 165441160 165441181 -34188969 + AT_rich Low_complexity Low_complexity 1 21 0 2003 186 116 19 chr5 165441941 165442355 -34187795 + MLT2B2 LTR ERVL 1 454 -61 219 163 0 23 chr5 165443694 165443737 -34186413 + T-rich Low_complexity Low_complexity 2 43 0 2271 190 120 19 chr5 165444503 165445216 -34184934 - L1MC4 LINE L1 -142 7900 7260 3427 104 2 22 chr5 165445216 165445718 -34184432 + LTR22B LTR ERVK 1 492 0 2271 190 120 19 chr5 165445718 165446142 -34184008 - L1MC4 LINE L1 -782 7260 6501 276 286 59 13 chr5 165446543 165446658 -34183492 - MIR SINE MIR -65 143 24 2283 128 0 0 chr5 165446996 165447308 -34182842 - AluSx SINE Alu 0 312 1 417 247 48 55 chr5 165447665 165447811 -34182339 - MIR SINE MIR -34 228 84 546 79 0 0 chr5 165447812 165447888 -34182262 - Tigger3b DNA MER2_type -821 410 335 2761 136 18 21 chr5 165447905 165448254 -34181896 + L1PB1 LINE L1 5141 5490 -661 2142 99 13 13 chr5 165448254 165448557 -34181593 + AluSq SINE Alu 1 303 -10 2761 136 18 21 chr5 165448557 165448795 -34181355 + L1PB1 LINE L1 5490 5727 -424 2462 132 50 5 chr5 165448898 165448962 -34181188 + L1PB1 LINE L1 5709 5769 -382 315 0 0 0 chr5 165448962 165448997 -34181153 + (TG)n Simple_repeat Simple_repeat 2 36 0 * 423 0 0 0 chr5 165448996 165449043 -34181107 + (TA)n Simple_repeat Simple_repeat 1 47 0 2462 132 50 5 chr5 165448997 165449401 -34180749 + L1PB1 LINE L1 5769 6150 -1 2284 103 0 0 chr5 165449403 165449695 -34180455 - AluY SINE Alu -19 292 1 4456 243 30 34 chr5 165449732 165451141 -34179009 + L1M4 LINE L1 2595 3999 -2147 1612 130 130 162 chr5 165451141 165451604 -34178546 + MER83 LTR ERV1 1 448 0 4456 243 30 34 chr5 165451604 165451884 -34178266 + L1M4 LINE L1 3999 4278 -1868 11824 181 48 13 chr5 165452023 165454374 -34175776 + L1MA7 LINE L1 14 2447 -5118 5447 119 12 28 chr5 165454367 165455022 -34175128 + L1MA7 LINE L1 2716 3347 -4218 * 2315 104 0 0 chr5 165455022 165455320 -34174830 + AluY SINE Alu 1 298 -13 5447 119 12 28 chr5 165455320 165455798 -34174352 + L1MA7 LINE L1 3347 3831 -3734 2857 71 3 0 chr5 165455801 165456153 -34173997 - THE1A LTR MaLR 0 355 3 10517 91 9 1 chr5 165456155 165457656 -34172494 - THE1A-int LTR MaLR 0 1580 69 4044 175 31 1 chr5 165457847 165458557 -34171593 - MER44D DNA MER2_type 0 605 3 7071 153 37 37 chr5 165458561 165458868 -34171282 + L1MA7 LINE L1 5278 5583 -2127 4487 41 0 2 chr5 165458868 165459401 -34170749 + L1PA5 LINE L1 5609 6142 -12 198 0 0 0 chr5 165459401 165459423 -34170727 + (TA)n Simple_repeat Simple_repeat 1 22 0 7071 153 37 37 chr5 165459430 165461547 -34168603 + L1MA7 LINE L1 5583 7701 -9 247 316 9 9 chr5 165461619 165461733 -34168417 + L1ME LINE L1 5645 5758 -363 618 297 69 71 chr5 165461752 165462288 -34167862 + L1M4 LINE L1 2205 2739 -3407 353 257 74 10 chr5 165462291 165462493 -34167657 + L1M1 LINE L1 4248 4462 -3103 318 246 16 56 chr5 165462695 165462821 -34167329 + L1M4 LINE L1 542 662 -5880 3813 145 22 17 chr5 165462829 165463545 -34166605 + L1MA8 LINE L1 5570 6289 -2 427 248 25 8 chr5 165463596 165463717 -34166433 + L1M4 LINE L1 657 779 -5763 270 0 0 0 chr5 165463747 165463777 -34166373 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1607 191 30 8 chr5 165463843 165464210 -34165940 - L1PA16 LINE L1 -1859 4287 3913 5690 120 19 4 chr5 165464217 165464898 -34165252 + L1PA16 LINE L1 4280 4950 -1216 2317 72 4 0 chr5 165464898 165465203 -34164947 + AluY SINE Alu 1 306 0 5690 120 19 4 chr5 165465203 165466403 -34163747 + L1PA16 LINE L1 4950 6166 0 555 173 70 19 chr5 165466405 165466561 -34163589 + L1M4 LINE L1 2522 2685 -3961 362 242 0 0 chr5 165466568 165466659 -34163491 + L1M4 LINE L1 2735 2825 -3819 2373 257 40 21 chr5 165466668 165467614 -34162536 + L1M4 LINE L1 3022 3985 -2659 4962 44 0 0 chr5 165468074 165468665 -34161485 - LTR10C LTR ERV1 0 591 1 4115 277 18 30 chr5 165468679 165468935 -34161215 - HERVI LTR ERV1 -14 7771 7513 233 29 29 0 chr5 165468935 165468969 -34161181 + (TTA)n Simple_repeat Simple_repeat 2 36 0 2348 82 3 3 chr5 165468972 165469275 -34160875 - AluY SINE Alu -8 303 1 4115 277 18 30 chr5 165469275 165470366 -34159784 - HERVI LTR ERV1 -274 7511 6437 1860 249 63 4 chr5 165470729 165471202 -34158948 - Harlequin LTR ERV1 -3744 3152 2652 3863 84 21 6 chr5 165471390 165472022 -34158128 - Harlequin LTR ERV1 -4359 2537 1897 374 289 20 7 chr5 165472037 165472186 -34157964 + CT-rich Low_complexity Low_complexity 4 154 0 203 281 0 0 chr5 165472261 165472318 -34157832 + T-rich Low_complexity Low_complexity 1 57 0 274 99 109 40 chr5 165472561 165472662 -34157488 - Harlequin LTR ERV1 -5947 949 842 252 0 0 0 chr5 165472765 165472793 -34157357 + (TA)n Simple_repeat Simple_repeat 2 29 0 312 252 47 28 chr5 165472800 165472907 -34157243 - Harlequin LTR ERV1 -6039 610 502 935 226 19 34 chr5 165473107 165473373 -34156777 - Harlequin LTR ERV1 -6360 289 28 4565 73 5 2 chr5 165473396 165473985 -34156165 - LTR10C LTR ERV1 0 591 1 228 291 13 25 chr5 165474580 165474659 -34155491 - LTR16C LTR ERVL 0 491 414 2989 130 4 13 chr5 165477682 165478404 -34151746 - L1P5 LINE L1 -442 5709 4991 2305 101 0 3 chr5 165478404 165478710 -34151440 - AluSc SINE Alu -4 305 1 2989 130 4 13 chr5 165478710 165478764 -34151386 - L1P5 LINE L1 -1160 4991 4938 237 316 6 34 chr5 165481186 165481363 -34148787 + (TG)n Simple_repeat Simple_repeat 2 173 0 7193 104 118 92 chr5 165481404 165483055 -34147095 + pTR5 LTR ERV1 743 2436 -2 2059 110 7 7 chr5 165483930 165484222 -34145928 - AluSc SINE Alu -17 292 1 232 273 170 62 chr5 165485059 165485253 -34144897 - LTR33 LTR ERVL 0 521 307 354 301 20 13 chr5 165485550 165485703 -34144447 + L1MEc LINE L1 2181 2334 -4062 2376 110 0 0 chr5 165485716 165486025 -34144125 - AluSc SINE Alu 0 309 1 1112 172 44 15 chr5 165486692 165486896 -34143254 - AluJo SINE Alu -24 288 79 2382 227 60 37 chr5 165489014 165491035 -34139115 - L1M4 LINE L1 -2956 3426 1258 23 33 0 0 chr5 165492120 165492150 -34138000 + AT_rich Low_complexity Low_complexity 1 30 0 2091 139 0 3 chr5 165492268 165492571 -34137579 + AluSc SINE Alu 1 302 -7 1850 143 3 11 chr5 165492767 165493053 -34137097 + AluSc SINE Alu 1 284 -25 878 145 0 0 chr5 165493258 165493389 -34136761 - FLAM_C SINE Alu -2 131 1 218 125 14 69 chr5 165493479 165493551 -34136599 + (TTAA)n Simple_repeat Simple_repeat 2 69 0 18193 28 6 1 chr5 165493554 165496511 -34133639 - L1PA4 LINE L1 -6 6149 3181 2068 238 62 24 chr5 165496761 165497345 -34132805 - MER45R DNA AcHobo -633 948 343 411 313 42 88 chr5 165497620 165498096 -34132054 - MLT1G1 LTR MaLR -34 561 108 1978 244 92 20 chr5 165498509 165499062 -34131088 - MLT1E LTR MaLR 0 593 1 371 317 201 15 chr5 165499115 165499374 -34130776 + MLT1I LTR MaLR 98 404 -5 241 242 15 0 chr5 165499398 165499464 -34130686 - LTR33 LTR ERVL -124 397 331 183 253 80 13 chr5 165500277 165500352 -34129798 - MIR SINE MIR -73 189 110 393 268 83 45 chr5 165501926 165502252 -34127898 + L1MEc LINE L1 2171 2470 -3745 2167 116 0 0 chr5 165502383 165502675 -34127475 - AluSx SINE Alu -20 292 1 8633 170 28 13 chr5 165503638 165506331 -34123819 - L1PB1 LINE L1 -1 6150 3412 1188 104 6 0 chr5 165506343 165506507 -34123643 - HSMAR1 DNA Mariner -725 562 398 834 72 0 0 chr5 165506732 165506843 -34123307 - HSMAR1 DNA Mariner 0 1287 1177 480 139 0 0 chr5 165506847 165506919 -34123231 + MER4A LTR ERV1 593 664 0 6369 128 98 59 chr5 165506922 165508828 -34121322 + MER4A-int LTR ERV1 1 2029 -4569 * 35707 82 22 25 chr5 165508822 165513887 -34116263 + HERVL-A2 LTR ERVL 606 5654 0 3246 90 23 0 chr5 165513887 165514322 -34115828 + MLT2A2 LTR ERVL 1 445 -8 481 234 0 0 chr5 165514322 165514416 -34115734 - MIR SINE MIR -96 166 73 456 273 13 0 chr5 165514957 165515080 -34115070 + MIR SINE MIR 99 222 -40 180 183 14 28 chr5 165515156 165515227 -34114923 + CT-rich Low_complexity Low_complexity 1 70 0 250 225 39 31 chr5 165515422 165515551 -34114599 + (TTA)n Simple_repeat Simple_repeat 3 132 0 280 255 38 66 chr5 165516190 165516296 -34113854 - L2 LINE L2 0 3272 3170 2277 108 0 0 chr5 165517568 165517865 -34112285 + AluSq SINE Alu 1 297 -16 6791 205 56 45 chr5 165517880 165518625 -34111525 + L1M1 LINE L1 2616 3351 -4214 1478 149 9 113 chr5 165518625 165518960 -34111190 + AluJb SINE Alu 2 301 -1 6791 205 56 45 chr5 165518960 165520933 -34109217 + L1M1 LINE L1 3351 5374 -2191 11509 175 15 5 chr5 165520977 165523790 -34106360 - L1P4 LINE L1 -341 5820 2986 4748 207 89 18 chr5 165523790 165525519 -34104631 + L1P4 LINE L1 2545 4428 -3156 * 5825 221 117 18 chr5 165525515 165525887 -34104263 - L1MEc LINE L1 -1508 4707 4374 2357 120 28 17 chr5 165525887 165526246 -34103904 - THE1B LTR MaLR -1 363 1 5825 221 117 18 chr5 165526246 165528372 -34101778 - L1MEc LINE L1 -1841 4374 1983 255 310 0 0 chr5 165529066 165529124 -34101026 + MIR SINE MIR 2 59 -203 913 281 100 0 chr5 165529147 165529457 -34100693 - L1M4 LINE L1 -1854 4292 3952 665 199 59 7 chr5 165529481 165529617 -34100533 - FRAM SINE Alu -23 153 11 214 309 0 0 chr5 165529619 165529703 -34100447 + T-rich Low_complexity Low_complexity 1 84 0 439 286 107 30 chr5 165529830 165530193 -34099957 - L1M4 LINE L1 -1159 4987 4597 323 287 52 17 chr5 165531398 165531513 -34098637 - MIR SINE MIR -124 138 20 1615 206 15 38 chr5 165535584 165535983 -34094167 + MLT1B LTR MaLR 1 390 0 268 367 86 0 chr5 165536157 165536285 -34093865 - MIR3 SINE MIR -3 205 67 268 225 0 42 chr5 165536771 165536842 -34093308 - MIR SINE MIR -107 155 88 239 267 13 53 chr5 165537334 165537409 -34092741 + L2 LINE L2 3238 3309 -4 938 197 183 11 chr5 165537938 165538223 -34091927 - MER33 DNA MER1_type 0 324 1 289 213 158 55 chr5 165538367 165538494 -34091656 - MIR SINE MIR 0 262 123 247 217 17 0 chr5 165538513 165538573 -34091577 + L1MC/D LINE L1 5789 5849 -1959 27 49 0 0 chr5 165538841 165538882 -34091268 + AT_rich Low_complexity Low_complexity 1 41 0 1041 192 62 0 chr5 165539181 165539389 -34090761 - MER58A DNA MER1_type 0 224 4 21 0 0 0 chr5 165539828 165539849 -34090301 + AT_rich Low_complexity Low_complexity 1 21 0 186 194 0 0 chr5 165540741 165540772 -34089378 + L2 LINE L2 3237 3267 -5 218 313 0 47 chr5 165542148 165542298 -34087852 + GA-rich Low_complexity Low_complexity 2 144 0 777 266 42 55 chr5 165542656 165543059 -34087091 - MER92A LTR ERV1 -9 403 6 633 229 91 43 chr5 165543366 165543551 -34086599 + L1MC/D LINE L1 5396 5598 -2210 1905 189 38 112 chr5 165543551 165544159 -34085991 - MLT1F1 LTR MaLR 0 567 5 633 229 91 43 chr5 165544159 165544226 -34085924 + L1MC/D LINE L1 5598 5660 -2148 713 267 169 19 chr5 165544773 165545080 -34085070 - MLT1E LTR MaLR -226 367 15 2268 254 80 18 chr5 165545208 165545272 -34084878 + L1MEc LINE L1 20 79 -6317 2150 105 31 100 chr5 165545272 165545663 -34084487 - THE1B LTR MaLR 0 364 1 2268 254 80 18 chr5 165545663 165546357 -34083793 + L1MEc LINE L1 79 825 -5571 483 279 18 48 chr5 165546363 165546592 -34083558 + L1M4 LINE L1 4050 4271 -1875 235 328 40 11 chr5 165546593 165546767 -34083383 + L1M3d LINE L1 1 179 -5712 1174 288 67 23 chr5 165546821 165547251 -34082899 + L1M3de LINE L1 1405 1853 -5633 442 285 68 35 chr5 165613942 165614347 -34015803 + L1MEc LINE L1 2094 2470 -3745 10024 107 2 22 chr5 165614493 165615922 -34014228 - LTR46-int LTR ERV1 -2180 4805 3405 3247 197 30 57 chr5 165615934 165616826 -34013324 - LTR5 LTR ERVK -14 955 88 2324 36 11 0 chr5 165616926 165617207 -34012943 + L1PA5 LINE L1 5870 6153 -1 635 116 0 11 chr5 165617257 165617352 -34012798 + MER4A LTR ERV1 5 98 -566 1766 131 3 77 chr5 165617352 165617725 -34012425 + MER4A LTR ERV1 261 664 0 248 148 0 74 chr5 165617725 165617779 -34012371 - MLT1C LTR MaLR -414 53 4 970 248 108 46 chr5 165617786 165618092 -34012058 - L1MDa LINE L1 -6129 411 87 2049 232 47 52 chr5 165618106 165618514 -34011636 + L1M3de LINE L1 639 1045 -6422 1603 192 3 7 chr5 165618514 165618801 -34011349 + AluJo SINE Alu 13 298 -14 2049 232 47 52 chr5 165618801 165618970 -34011180 + L1M3de LINE L1 1045 1213 -6254 237 258 0 0 chr5 165619170 165619236 -34010914 + A-rich Low_complexity Low_complexity 1 66 0 256 255 38 66 chr5 165619803 165619909 -34010241 - L2 LINE L2 0 3272 3170 2311 108 0 0 chr5 165621181 165621478 -34008672 + AluSq SINE Alu 1 297 -16 1912 219 122 31 chr5 165621493 165622238 -34007912 + L1M3de LINE L1 2616 3428 -4137 1327 173 9 4 chr5 165622242 165622473 -34007677 + AluJb SINE Alu 6 237 -75 683 148 0 0 chr5 165622475 165622583 -34007567 + AluJb SINE Alu 203 310 -2 688 205 6 0 chr5 165622596 165622757 -34007393 + L1M3de LINE L1 3439 3600 -3966 6646 195 28 44 chr5 165623049 165624796 -34005354 + L1M3de LINE L1 3656 5374 -2191 11778 175 14 5 chr5 165624840 165627655 -34002495 - L1P4 LINE L1 -341 5820 2986 4869 204 91 19 chr5 165627655 165629383 -34000767 + L1P4 LINE L1 2545 4428 -3156 3629 236 122 21 chr5 165629379 165629752 -34000398 - L1MEc LINE L1 -1508 4707 4373 * 1758 288 3 77 chr5 165629752 165630144 -34000006 - THE1B LTR MaLR -1 363 1 3629 236 122 21 chr5 165630144 165632272 -33997878 - L1MEc LINE L1 -1842 4373 1983 226 310 0 0 chr5 165632966 165633024 -33997126 + MIR SINE MIR 2 59 -203 950 258 108 13 chr5 165633047 165633361 -33996789 - L1M4 LINE L1 -1854 4292 3949 671 199 59 7 chr5 165633380 165633516 -33996634 - FRAM SINE Alu -23 153 11 214 309 0 0 chr5 165633518 165633602 -33996548 + T-rich Low_complexity Low_complexity 1 84 0 477 290 108 28 chr5 165633729 165634091 -33996059 - L1M4 LINE L1 -1159 4987 4597 288 287 52 17 chr5 165635296 165635411 -33994739 - MIR SINE MIR -124 138 20 250 225 39 31 chr5 165636224 165636353 -33993797 + (TAA)n Simple_repeat Simple_repeat 3 132 0 180 183 14 28 chr5 165636548 165636619 -33993531 + GA-rich Low_complexity Low_complexity 1 70 0 425 273 13 0 chr5 165636695 165636818 -33993332 - MIR SINE MIR -40 222 99 450 207 0 0 chr5 165637367 165637449 -33992701 + MIR SINE MIR 81 162 -100 1727 104 18 43 chr5 165637453 165637733 -33992417 - MLT2A2 LTR ERVL -8 445 173 25475 82 19 3 chr5 165637997 165642956 -33987194 - HERVL LTR ERVL -6 5648 606 8382 126 144 57 chr5 165642950 165644294 -33985856 - MER4A-int LTR ERV1 -4569 2029 475 * 234 105 0 0 chr5 165644294 165644332 -33985818 + (CAA)n Simple_repeat Simple_repeat 2 39 0 8382 126 144 57 chr5 165644332 165644853 -33985297 - MER4A-int LTR ERV1 -6123 475 1 480 139 0 0 chr5 165644856 165644928 -33985222 - MER4A LTR ERV1 0 664 593 834 72 0 0 chr5 165644932 165645043 -33985107 + HSMAR1 DNA Mariner 1177 1287 0 1213 109 0 0 chr5 165645268 165645433 -33984717 + HSMAR1 DNA Mariner 398 562 -725 8669 171 25 11 chr5 165645445 165648142 -33982008 + L1PB1 LINE L1 3412 6150 -1 3922 213 26 56 chr5 165649400 165650324 -33979826 + L1M4b LINE L1 586 1536 -5323 635 226 0 0 chr5 165650324 165650439 -33979711 + FLAM_A SINE Alu 3 117 -16 195 42 0 0 chr5 165650445 165650469 -33979681 + (TAA)n Simple_repeat Simple_repeat 2 25 0 3922 213 26 56 chr5 165650469 165650597 -33979553 + L1M4b LINE L1 1541 1614 -5245 986 98 0 0 chr5 165650608 165650731 -33979419 + AluY SINE Alu 1 123 -188 3004 59 0 0 chr5 165650731 165651120 -33979030 + L1P LINE L1 2263 2651 -3495 991 142 53 6 chr5 165651120 165651289 -33978861 - MSTA LTR MaLR -251 177 1 838 235 119 38 chr5 165651517 165651836 -33978314 - MLT1C LTR MaLR -122 345 1 592 215 92 46 chr5 165651875 165652136 -33978014 - L1MC5 LINE L1 -81 7880 7608 201 167 0 0 chr5 165652164 165652200 -33977950 + T-rich Low_complexity Low_complexity 3 38 0 786 249 63 30 chr5 165652384 165652621 -33977529 + MIR SINE MIR 4 248 -14 561 300 22 26 chr5 165652837 165653064 -33977086 + L2 LINE L2 2528 2753 -561 2365 91 7 0 chr5 165653358 165653666 -33976484 - AluSp SINE Alu -3 310 1 1682 154 75 4 chr5 165654120 165654399 -33975751 + AluSx SINE Alu 1 299 -13 207 100 0 0 chr5 165654399 165654429 -33975721 + (GGGA)n Simple_repeat Simple_repeat 1 30 0 834 288 58 0 chr5 165654469 165654709 -33975441 - MIR SINE MIR 0 262 9 27 49 0 0 chr5 165654930 165654971 -33975179 + AT_rich Low_complexity Low_complexity 1 41 0 22 56 0 0 chr5 165656933 165656969 -33973181 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr5 165657149 165657177 -33972973 + AT_rich Low_complexity Low_complexity 1 28 0 1889 162 25 52 chr5 165657288 165657689 -33972461 + MLT1B LTR MaLR 1 390 0 183 364 0 0 chr5 165658142 165658208 -33971942 + MIR SINE MIR 151 216 -46 308 220 110 55 chr5 165658516 165658625 -33971525 + MLT1J2 LTR MaLR 319 433 -17 1897 177 0 0 chr5 165658784 165659096 -33971054 + AluJb SINE Alu 1 312 0 1408 253 104 91 chr5 165659473 165660959 -33969191 + L1M4b LINE L1 230 1784 -5071 1004 205 88 15 chr5 165660966 165661229 -33968921 + L1MCa LINE L1 19 300 -6126 800 159 14 0 chr5 165661253 165661391 -33968759 - MER82 DNA MER2_type -513 140 1 2519 139 16 87 chr5 165662840 165663335 -33966815 - LTR46 LTR ERV1 0 460 1 181 317 8 98 chr5 165663779 165663902 -33966248 - L2 LINE L2 -2946 368 257 2523 155 80 0 chr5 165663903 165664329 -33965821 - LTR46 LTR ERV1 0 460 1 4374 123 14 1 chr5 165664329 165664980 -33965170 - LTR46-int LTR ERV1 0 6985 6327 1615 206 15 38 chr5 165669074 165669473 -33960677 + MLT1B LTR MaLR 1 390 0 189 281 79 79 chr5 165669650 165669789 -33960361 - MIR3 SINE MIR -3 205 67 268 225 0 42 chr5 165670275 165670346 -33959804 - MIR SINE MIR -107 155 88 239 267 13 53 chr5 165670838 165670913 -33959237 + L2 LINE L2 3238 3309 -4 938 197 183 11 chr5 165671441 165671726 -33958424 - MER33 DNA MER1_type 0 324 1 289 213 158 55 chr5 165671870 165671997 -33958153 - MIR SINE MIR 0 262 123 247 217 17 0 chr5 165672015 165672075 -33958075 + L1MC/D LINE L1 5789 5849 -1959 27 49 0 0 chr5 165672348 165672389 -33957761 + AT_rich Low_complexity Low_complexity 1 41 0 1044 192 62 0 chr5 165672688 165672896 -33957254 - MER58A DNA MER1_type 0 224 4 21 0 0 0 chr5 165673335 165673356 -33956794 + AT_rich Low_complexity Low_complexity 1 21 0 187 194 0 0 chr5 165674248 165674279 -33955871 + L2 LINE L2 3237 3267 -5 218 313 0 47 chr5 165675655 165675805 -33954345 + GA-rich Low_complexity Low_complexity 2 144 0 888 263 42 55 chr5 165676163 165676566 -33953584 - MER92A LTR ERV1 -9 403 6 180 316 18 18 chr5 165676765 165676822 -33953328 - L2 LINE L2 -508 2806 2750 830 272 131 25 chr5 165676873 165677058 -33953092 + L1MC4a LINE L1 5396 5560 -2248 1915 189 38 112 chr5 165677058 165677666 -33952484 - MLT1F1 LTR MaLR 0 567 5 830 272 131 25 chr5 165677666 165677914 -33952236 + L1MC4a LINE L1 5560 5875 -1933 482 242 0 0 chr5 165678093 165678188 -33951962 + MER82 DNA MER2_type 8 102 -551 24 0 0 0 chr5 165678188 165678212 -33951938 + AT_rich Low_complexity Low_complexity 1 24 0 233 244 70 0 chr5 165678227 165678313 -33951837 - L1MC4 LINE L1 -1330 6712 6621 35 0 0 0 chr5 165678402 165678437 -33951713 + AT_rich Low_complexity Low_complexity 1 35 0 321 172 0 0 chr5 165678460 165678524 -33951626 + (TA)n Simple_repeat Simple_repeat 1 64 0 198 261 130 22 chr5 165678527 165678619 -33951531 - MIR SINE MIR -76 186 85 1139 218 15 0 chr5 165678689 165678895 -33951255 + MER82 DNA MER2_type 444 652 -1 1719 251 107 21 chr5 165678991 165679504 -33950646 - MLT1E LTR MaLR -22 571 15 2382 259 83 20 chr5 165679632 165679696 -33950454 + L1ME2 LINE L1 20 79 -6317 2144 105 31 100 chr5 165679696 165680087 -33950063 - THE1B LTR MaLR 0 364 1 2382 259 83 20 chr5 165680087 165680780 -33949370 + L1ME2 LINE L1 79 825 -5571 550 275 18 48 chr5 165680786 165681015 -33949135 + L1ME2 LINE L1 4119 4340 -1875 285 328 40 11 chr5 165681016 165681190 -33948960 + L1M3d LINE L1 1 179 -5712 4052 263 47 17 chr5 165681244 165683018 -33947132 + L1M4 LINE L1 2 2137 -4516 4123 247 45 19 chr5 165683031 165684481 -33945669 + L1M4 LINE L1 3916 5403 -1329 1860 205 69 17 chr5 165684487 165684951 -33945199 - LTR22B LTR ERVK -4 488 1 2499 88 6 12 chr5 165684951 165685292 -33944858 - HERVK22 LTR ERVK 0 6837 6499 5275 115 7 4 chr5 165685365 165686115 -33944035 - HERVK22 LTR ERVK -6085 752 1 2030 193 61 11 chr5 165686123 165686584 -33943566 - LTR22B LTR ERVK -8 484 1 281 106 21 0 chr5 165686640 165686687 -33943463 + L1MB2 LINE L1 6119 6166 -5 26 0 0 0 chr5 165686817 165686843 -33943307 + AT_rich Low_complexity Low_complexity 1 26 0 1882 168 0 0 chr5 165686847 165687133 -33943017 - AluSx SINE Alu -26 286 1 21 0 0 0 chr5 165687333 165687354 -33942796 + AT_rich Low_complexity Low_complexity 1 21 0 1096 163 0 32 chr5 165687369 165687559 -33942591 - AluJo SINE Alu -16 296 113 857 181 0 7 chr5 165687675 165687819 -33942331 - AluJo SINE Alu -169 143 1 822 214 83 40 chr5 165687825 165688077 -33942073 + L1ME2 LINE L1 4590 4852 -1363 811 221 47 34 chr5 165688073 165688308 -33941842 + L1ME2 LINE L1 5972 6209 -24 * 342 307 26 0 chr5 165689328 165689442 -33940708 - L1MEc LINE L1 -3748 2467 2351 371 289 106 23 chr5 165689512 165689730 -33940420 - L1MEc LINE L1 -4138 2258 2023 470 250 0 7 chr5 165689862 165689912 -33940238 - L1MA10 LINE L1 -5 6329 6280 825 238 67 17 chr5 165689912 165690433 -33939717 - L1ME1 LINE L1 -45 6121 5521 4636 202 91 30 chr5 165690769 165692566 -33937584 + L1MDa LINE L1 1003 2911 -3629 1497 253 56 42 chr5 165692578 165693079 -33937071 + L1MDa LINE L1 3034 3551 -2989 1943 143 0 14 chr5 165693079 165693366 -33936784 + AluSx SINE Alu 1 283 -29 1497 253 56 42 chr5 165693366 165693626 -33936524 + L1MDa LINE L1 3551 3806 -2734 9251 228 47 47 chr5 165693629 165694654 -33935496 - L1 LINE L1 -1596 4754 3730 2539 117 16 0 chr5 165694654 165695023 -33935127 + THE1C LTR MaLR 1 375 0 9251 228 47 47 chr5 165695023 165697156 -33932994 - L1 LINE L1 -2620 3730 1741 376 98 0 0 chr5 165697156 165697207 -33932943 + 5S rRNA rRNA 1 51 -70 9251 228 47 47 chr5 165697207 165698016 -33932134 - L1 LINE L1 -4609 1741 933 1463 294 27 47 chr5 165698672 165699065 -33931085 - L1 LINE L1 -4754 596 197 2242 97 10 0 chr5 165699065 165699354 -33930796 - AluSp SINE Alu -21 292 1 1463 294 27 47 chr5 165699354 165699506 -33930644 - L1 LINE L1 -5153 197 38 2800 10 0 6 chr5 165699506 165699818 -33930332 - AluYb8 SINE Alu -8 310 1 1463 294 27 47 chr5 165699818 165699856 -33930294 - L1 LINE L1 -5312 38 1 1322 201 87 3 chr5 165699857 165700166 -33929984 + L1MD1 LINE L1 5818 6152 -90 363 274 16 0 chr5 165700221 165700345 -33929805 - L1M4 LINE L1 -1785 4361 4236 535 170 21 0 chr5 165703032 165703126 -33927024 + FLAM_C SINE Alu 22 117 -26 197 33 33 0 chr5 165703130 165703160 -33926990 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 34 0 0 0 chr5 165703432 165703466 -33926684 + AT_rich Low_complexity Low_complexity 1 34 0 938 9 0 0 chr5 165703471 165703576 -33926574 + AluYa5/8 SINE Alu 200 304 -6 1168 227 90 103 chr5 165703686 165704524 -33925626 + L1M4 LINE L1 1014 1844 -4800 2182 126 0 0 chr5 165704524 165704834 -33925316 - AluSg SINE Alu 0 310 1 1168 227 90 103 chr5 165704834 165705009 -33925141 + L1M4 LINE L1 1844 2020 -4624 1839 168 75 19 chr5 165705083 165705458 -33924692 + MSTD LTR MaLR 1 396 0 3351 246 69 35 chr5 165705484 165706024 -33924126 + L1M4 LINE L1 2255 2775 -3869 2706 14 0 0 chr5 165706024 165706316 -33923834 + AluYb8 SINE Alu 15 306 -12 3351 246 69 35 chr5 165706316 165707032 -33923118 + L1M4 LINE L1 2775 3544 -3100 4711 195 57 9 chr5 165707032 165708064 -33922086 + Tigger6a DNA MER2_type 1 1082 -1 3351 246 69 35 chr5 165708064 165708567 -33921583 + L1M4 LINE L1 3544 4028 -2616 622 160 19 0 chr5 165708577 165708683 -33921467 + MER77 LTR ERV1 498 605 0 4901 214 79 5 chr5 165708683 165709970 -33920180 + L1M4 LINE L1 4245 5627 -1017 441 194 111 0 chr5 165709965 165710073 -33920077 + L1MB8 LINE L1 4888 5007 -1139 * 1792 185 32 35 chr5 165710072 165710257 -33919893 - L1M4 LINE L1 -716 5462 5278 266 29 0 0 chr5 165710257 165710291 -33919859 + HSMAR1 DNA Mariner 1 34 -1253 1792 185 32 35 chr5 165710291 165710700 -33919450 - L1M4 LINE L1 -900 5278 4852 3946 175 66 10 chr5 165710749 165711547 -33918603 + L1MB8 LINE L1 5318 6160 -18 1155 192 81 4 chr5 165711580 165711939 -33918211 + MSTB1 LTR MaLR 4 432 0 243 88 0 0 chr5 165713979 165714013 -33916137 + (TA)n Simple_repeat Simple_repeat 1 34 0 1640 203 49 3 chr5 165714742 165715091 -33915059 + MLT1A1 LTR MaLR 1 365 0 209 282 99 0 chr5 165715470 165715541 -33914609 + L2 LINE L2 3187 3264 -8 1656 207 76 65 chr5 165715627 165716178 -33913972 + MER90 LTR ERV1 58 614 0 243 296 12 25 chr5 165717607 165717688 -33912462 - MER81 DNA DNA 0 114 35 780 144 75 7 chr5 165718388 165718534 -33911616 - L1 LINE L1 -2456 3690 3535 1599 164 15 0 chr5 165718534 165718803 -33911347 - Tigger1 DNA MER2_type -2145 273 1 286 260 94 16 chr5 165718817 165719009 -33911141 + L1MEc LINE L1 2154 2360 -4036 207 0 0 0 chr5 165719071 165719094 -33911056 + (CAT)n Simple_repeat Simple_repeat 2 24 0 260 320 117 25 chr5 165719195 165719392 -33910758 - MLT1H LTR MaLR -216 333 119 672 222 49 89 chr5 165719427 165719796 -33910354 + L1MC5 LINE L1 6769 7122 -839 620 215 19 6 chr5 165719835 165719993 -33910157 + L1P LINE L1 4926 5085 -1061 1957 159 7 0 chr5 165720757 165721065 -33909085 - AluSx SINE Alu -2 310 1 22 0 0 0 chr5 165722048 165722070 -33908080 + AT_rich Low_complexity Low_complexity 1 22 0 1817 125 21 11 chr5 165723260 165723541 -33906609 - MER49 LTR ERV1 -461 462 179 381 359 4 22 chr5 165724247 165724478 -33905672 - L1 LINE L1 -1611 4535 4309 1710 181 7 11 chr5 165724529 165724816 -33905334 + AluJo SINE Alu 3 288 -24 304 319 156 8 chr5 165724989 165725252 -33904898 - L1MC4a LINE L1 -1897 5911 5610 344 294 15 75 chr5 165725410 165725611 -33904539 - L1 LINE L1 -1943 4203 4015 1835 190 150 8 chr5 165725613 165726092 -33904058 - L1M3e LINE L1 -6483 547 1 5235 199 102 33 chr5 165726096 165727444 -33902706 - L1MDa LINE L1 -4658 1882 436 2109 118 3 34 chr5 165727444 165727766 -33902384 - AluSx SINE Alu 0 312 1 5235 199 102 33 chr5 165727766 165727794 -33902356 - L1MDa LINE L1 -6104 436 411 708 181 14 21 chr5 165727794 165727951 -33902199 - MLT1B LTR MaLR 0 439 252 281 261 0 0 chr5 165727965 165728030 -33902120 - MLT1B LTR MaLR -252 122 58 630 131 0 10 chr5 165728034 165728133 -33902017 + MER4A LTR ERV1 1 98 -566 272 114 23 0 chr5 165728133 165728177 -33901973 + MER4A LTR ERV1 261 305 -359 2633 86 152 11 chr5 165728197 165728708 -33901442 + MER4-int LTR ERV1 169 817 -5781 231 146 0 49 chr5 165728709 165728750 -33901400 + LTR49 LTR ERV1 273 311 -284 17989 147 112 108 chr5 165728752 165728982 -33901168 + MER4-int LTR ERV1 865 1093 -5505 222 91 0 0 chr5 165728982 165729015 -33901135 + (TG)n Simple_repeat Simple_repeat 2 34 0 17989 147 112 108 chr5 165729015 165729308 -33900842 + MER4-int LTR ERV1 1093 1384 -5214 2220 118 0 6 chr5 165729308 165729623 -33900527 - AluSq SINE Alu 0 313 1 17989 147 112 108 chr5 165729623 165734811 -33895339 + MER4-int LTR ERV1 1384 6596 -2 42840 53 3 0 chr5 165734843 165740584 -33889566 + L1P2 LINE L1 11 5762 -392 435 145 13 13 chr5 165740721 165740797 -33889353 - LTR46-int LTR ERV1 -5000 1985 1910 * 2636 136 13 15 chr5 165740796 165741260 -33888890 - LTR46-int LTR ERV1 -5700 1285 823 3686 138 9 4 chr5 165741358 165741915 -33888235 - LTR46-int LTR ERV1 -6425 560 1 1723 158 137 0 chr5 165741966 165742295 -33887855 - LTR46 LTR ERV1 0 460 87 * 2383 155 18 33 chr5 165742291 165742780 -33887370 - MER51A-int LTR ERV1 -3117 2100 1619 15341 128 37 22 chr5 165742782 165744836 -33885314 - MER51A-int LTR ERV1 -4509 3307 1285 2270 102 0 25 chr5 165744836 165745150 -33885000 - AluSg SINE Alu -2 308 3 15341 128 37 22 chr5 165745150 165745162 -33884988 - MER51A-int LTR ERV1 -6531 1285 1275 2155 94 0 63 chr5 165745162 165745481 -33884669 - AluSc SINE Alu -10 299 1 15341 128 37 22 chr5 165745481 165746568 -33883582 - MER51A-int LTR ERV1 -6541 1275 1 2277 107 85 15 chr5 165746568 165746924 -33883226 - MER51A LTR ERV1 0 634 157 2518 74 0 0 chr5 165746924 165747235 -33882915 - AluY SINE Alu 0 311 1 2277 107 85 15 chr5 165747235 165747404 -33882746 - MER51A LTR ERV1 -477 157 1 915 230 110 60 chr5 165748682 165749065 -33881085 + MLT2D LTR ERVL 13 414 0 2483 129 52 23 chr5 165749084 165749419 -33880731 - L1MB3 LINE L1 -168 6015 5662 2046 134 3 7 chr5 165749419 165749717 -33880433 - AluSx SINE Alu -13 299 3 2483 129 52 23 chr5 165749717 165749824 -33880326 - L1MB3 LINE L1 -521 5662 5560 21 0 0 0 chr5 165749985 165750006 -33880144 + AT_rich Low_complexity Low_complexity 1 21 0 186 317 66 72 chr5 165750125 165750292 -33879858 + L2 LINE L2 3016 3181 -91 333 279 56 9 chr5 165750815 165750956 -33879194 - L1MC/D LINE L1 -297 5824 5693 966 196 0 12 chr5 165751070 165751238 -33878912 + FRAM SINE Alu 1 166 0 246 350 88 46 chr5 165751418 165751612 -33878538 - L2 LINE L2 -42 3230 3029 339 267 0 0 chr5 165751620 165751710 -33878440 - MIR SINE MIR 0 262 173 809 175 0 0 chr5 165751710 165751869 -33878281 + FLAM_C SINE Alu 1 159 0 240 191 0 0 chr5 165751895 165751942 -33878208 - MIR SINE MIR -117 145 99 286 338 216 17 chr5 165751994 165752620 -33877530 - L2 LINE L2 -258 3014 2266 878 158 0 20 chr5 165752651 165752797 -33877353 + FLAM_C SINE Alu 1 143 0 2213 119 33 0 chr5 165752800 165753102 -33877048 + AluSx SINE Alu 1 312 0 279 258 52 10 chr5 165753164 165753261 -33876889 + L1MC4a LINE L1 5613 5713 -451 362 268 91 87 chr5 165753299 165753530 -33876620 + L1MC4a LINE L1 5768 5999 -1809 378 241 159 53 chr5 165754255 165754425 -33875725 - MIR SINE MIR -8 254 67 364 242 204 15 chr5 165755187 165755319 -33874831 + MIR SINE MIR 102 258 -4 290 118 20 20 chr5 165755695 165755746 -33874404 + MIR SINE MIR 75 125 -83 503 249 280 0 chr5 165755777 165755970 -33874180 + MIR SINE MIR 15 261 -1 307 316 35 9 chr5 165756136 165756250 -33873900 - MIR3 SINE MIR -11 197 81 333 258 273 16 chr5 165756440 165756634 -33873516 - MIR SINE MIR 0 262 19 338 321 9 18 chr5 165757181 165757290 -33872860 + L2 LINE L2 3205 3312 -1 335 360 33 7 chr5 165757315 165757465 -33872685 + MIR SINE MIR 20 173 -89 378 267 82 4 chr5 165758139 165758292 -33871858 + MIR SINE MIR 22 183 -62 2578 79 0 0 chr5 165758406 165758711 -33871439 - AluSq SINE Alu -8 305 1 343 264 240 8 chr5 165758713 165758842 -33871308 + MIR SINE MIR 102 260 -2 572 207 64 29 chr5 165758867 165759007 -33871143 - MIR SINE MIR -70 192 48 389 296 92 14 chr5 165759199 165759341 -33870809 + MIR3 SINE MIR 8 160 -48 474 293 128 0 chr5 165759342 165759506 -33870644 - MER5A DNA MER1_type -1 188 4 547 279 52 39 chr5 165759933 165760166 -33869984 - L2 LINE L2 -1 3312 3077 435 325 48 74 chr5 165760226 165760688 -33869462 + L2 LINE L2 2818 3267 -5 2562 72 0 3 chr5 165760726 165761033 -33869117 + AluSq SINE Alu 1 306 -7 277 271 0 24 chr5 165761224 165761309 -33868841 - MIR SINE MIR -61 147 65 2341 96 3 3 chr5 165762054 165762356 -33867794 + AluSg SINE Alu 1 302 -8 255 319 96 11 chr5 165762544 165762638 -33867512 + MIR3 SINE MIR 77 178 -30 1682 177 50 39 chr5 165762693 165762738 -33867412 + MLT1A1 LTR MaLR 1 44 -321 2190 97 14 7 chr5 165762738 165763027 -33867123 - AluSg SINE Alu -19 291 1 1682 177 50 39 chr5 165763027 165763342 -33866808 + MLT1A1 LTR MaLR 44 365 0 2762 208 39 9 chr5 165763413 165763957 -33866193 + MER68 LTR ERV1 1 560 -2 647 180 16 0 chr5 165764028 165764156 -33865994 - MER33 DNA MER1_type 0 324 195 715 168 0 0 chr5 165764156 165764269 -33865881 - AluJ SINE Alu -5 307 195 1011 147 0 0 chr5 165764271 165764414 -33865736 - AluJ SINE Alu -169 143 1 513 214 42 18 chr5 165764414 165764582 -33865568 - MER33 DNA MER1_type -119 205 34 806 256 91 33 chr5 165764607 165764647 -33865503 + MIR SINE MIR 7 43 -219 2065 176 59 40 chr5 165764647 165765091 -33865059 + LTR47A LTR ERVL 1 452 0 806 256 91 33 chr5 165765091 165765292 -33864858 + MIR SINE MIR 43 262 0 282 257 68 0 chr5 165765298 165765372 -33864778 - MIR3 SINE MIR -18 190 112 234 267 48 116 chr5 165765814 165765960 -33864190 + L3 LINE CR1 1423 1558 -19 386 343 123 32 chr5 165766142 165766615 -33863535 - L2 LINE L2 0 3272 2750 334 260 115 0 chr5 165767072 165767168 -33862982 - MER96 DNA MER1_type? 0 175 69 420 300 105 9 chr5 165767397 165767539 -33862611 + MIR3 SINE MIR 1 161 -47 249 229 86 0 chr5 165767530 165767600 -33862550 - MIR SINE MIR -3 259 184 * 383 348 32 7 chr5 165767820 165767975 -33862175 + MER5A DNA MER1_type 24 182 -7 198 250 89 18 chr5 165768094 165768150 -33862000 - L2 LINE L2 -4 3309 3250 385 241 37 9 chr5 165768218 165768326 -33861824 - MIR3 SINE MIR -20 188 78 1760 129 29 13 chr5 165768363 165768672 -33861478 + MER39 LTR ERV1 394 707 0 359 245 157 31 chr5 165771424 165771583 -33858567 - MIR3 SINE MIR 0 208 30 224 286 0 0 chr5 165772019 165772075 -33858075 - MIR SINE MIR -144 118 63 185 292 0 0 chr5 165772774 165772822 -33857328 - MIR3 SINE MIR -11 197 150 580 274 20 14 chr5 165773039 165773185 -33856965 - MIR3 SINE MIR -41 167 21 244 297 54 0 chr5 165773454 165773528 -33856622 + L2 LINE L2 2563 2640 -674 292 220 220 30 chr5 165773785 165773917 -33856233 + MIR3 SINE MIR 32 188 -20 395 300 17 72 chr5 165774571 165774751 -33855399 - MIR3 SINE MIR -27 181 12 328 290 30 20 chr5 165775311 165775411 -33854739 + MIR SINE MIR 29 129 -79 250 300 133 25 chr5 165776305 165776425 -33853725 - MIR3 SINE MIR -63 145 13 247 91 182 0 chr5 165777727 165777771 -33852379 - MADE1 DNA Mariner -4 76 25 998 171 47 0 chr5 165777932 165778102 -33852048 + FAM SINE Alu 1 49 0 491 318 0 0 chr5 165778257 165778383 -33851767 - MIR SINE MIR -67 141 16 581 292 69 10 chr5 165779440 165779642 -33850508 - MIR SINE MIR 0 262 49 538 295 67 50 chr5 165779776 165780118 -33850032 - L3 LINE CR1 -48 1529 1182 * 647 308 38 59 chr5 165780104 165780687 -33849463 + L2 LINE L2 2659 3232 -40 637 251 117 38 chr5 165781017 165781256 -33848894 - MIR SINE MIR 0 262 5 2374 105 0 3 chr5 165781447 165781760 -33848390 + AluSq SINE Alu 1 312 -1 385 127 25 13 chr5 165781768 165781847 -33848303 + GA-rich Low_complexity Low_complexity 2 81 0 216 282 42 0 chr5 165783418 165783489 -33846661 - MIR SINE MIR -1 261 188 214 246 196 7 chr5 165783968 165784106 -33846044 - MIR3 SINE MIR -14 194 31 1109 236 112 22 chr5 165784822 165785225 -33844925 - MER113 DNA MER1_type? -74 447 9 697 265 79 47 chr5 165785627 165785880 -33844270 - MIR SINE MIR 0 262 2 186 243 129 43 chr5 165786501 165786571 -33843579 - MIR3 SINE MIR -46 162 87 258 290 136 70 chr5 165787216 165787502 -33842648 - L2 LINE L2 -20 3252 2948 24 0 0 0 chr5 165788013 165788037 -33842113 + AT_rich Low_complexity Low_complexity 1 24 0 188 301 44 26 chr5 165788057 165788170 -33841980 + MIR SINE MIR 37 151 -57 560 212 146 0 chr5 165788537 165788688 -33841462 - MIR3 SINE MIR -20 188 16 354 216 29 39 chr5 165788762 165788864 -33841286 + L1ME4a LINE L1 5931 6031 -90 216 242 139 93 chr5 165789632 165789675 -33840475 + L2 LINE L2 3089 3129 -184 2275 120 0 0 chr5 165789675 165789974 -33840176 - AluSx SINE Alu -13 299 1 1669 186 14 7 chr5 165789979 165790270 -33839880 - AluJo SINE Alu -19 293 1 216 242 139 93 chr5 165790270 165790435 -33839715 + L2 LINE L2 3132 3313 0 2062 136 20 0 chr5 165790544 165790838 -33839312 - AluSq SINE Alu -13 300 1 293 305 107 15 chr5 165790950 165791081 -33839069 - MIR3 SINE MIR -51 157 15 418 328 78 8 chr5 165791837 165792081 -33838069 + L1ME LINE L1 5559 5819 -302 1999 179 0 3 chr5 165792097 165792409 -33837741 + AluJb SINE Alu 2 312 0 1741 144 89 4 chr5 165792676 165792947 -33837203 - AluJo SINE Alu -18 294 1 215 244 0 0 chr5 165792992 165793033 -33837117 + (TATATG)n Simple_repeat Simple_repeat 3 43 0 2050 117 14 7 chr5 165793704 165793995 -33836155 - AluSx SINE Alu -19 293 1 4181 212 47 50 chr5 165794994 165795275 -33834875 + L1MC4a LINE L1 6565 6845 -963 180 77 0 0 chr5 165795275 165795301 -33834849 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4181 212 47 50 chr5 165795301 165796299 -33833851 + L1MC4a LINE L1 6845 7808 0 601 252 39 13 chr5 165796938 165797093 -33833057 - MIR SINE MIR -48 214 56 180 295 38 57 chr5 165797531 165797636 -33832514 + MIR SINE MIR 99 201 -61 540 319 234 3 chr5 165798056 165798420 -33831730 + L3 LINE CR1 1061 1508 -69 1316 250 55 12 chr5 165798813 165799213 -33830937 - MER113 DNA MER1_type? -67 454 38 494 130 0 0 chr5 165799238 165799315 -33830835 - AluJ/FRAM SINE Alu -11 301 225 1832 147 44 0 chr5 165800158 165800462 -33829688 - AluSq SINE Alu 0 316 1 1712 151 0 71 chr5 165800683 165801007 -33829143 - AluJo SINE Alu -3 309 9 990 157 10 61 chr5 165801576 165801773 -33828377 - AluJo SINE Alu -125 187 1 191 161 0 0 chr5 165801825 165801856 -33828294 - MIR SINE MIR -97 111 81 373 282 18 0 chr5 165802267 165802377 -33827773 + MIR3 SINE MIR 81 192 -16 218 352 28 19 chr5 165802382 165802490 -33827660 + MER5A DNA MER1_type 1 109 -80 300 298 60 63 chr5 165803285 165803667 -33826483 + L2 LINE L2 2890 3270 -43 2438 110 0 0 chr5 165803898 165804206 -33825944 - AluSx SINE Alu -4 308 1 240 355 41 8 chr5 165804463 165804584 -33825566 - MIR SINE MIR -15 247 123 306 358 89 0 chr5 165804795 165804918 -33825232 + MLT1I LTR MaLR 71 204 -205 1869 160 13 26 chr5 165805195 165805507 -33824643 + AluJb SINE Alu 1 308 -4 367 242 134 59 chr5 165805914 165806100 -33824050 - L2 LINE L2 -1 3312 3113 184 236 150 63 chr5 165806564 165806691 -33823459 + MIR3 SINE MIR 6 143 -65 478 321 83 5 chr5 165806805 165806998 -33823152 - MIR SINE MIR -28 234 27 440 257 107 14 chr5 165807081 165807221 -33822929 + MIR SINE MIR 11 163 -99 201 226 49 98 chr5 165808017 165808119 -33822031 + MIR SINE MIR 95 191 -71 1977 123 42 6 chr5 165808159 165808240 -33821910 - MER2 DNA MER2_type 0 344 267 2102 110 24 0 chr5 165808240 165808532 -33821618 + AluSg SINE Alu 1 299 -11 1977 123 42 6 chr5 165808532 165808782 -33821368 - MER2 DNA MER2_type -77 267 1 1778 107 0 0 chr5 165808792 165809017 -33821133 - AluSx SINE Alu -87 225 1 382 278 185 7 chr5 165809506 165809657 -33820493 - MIR3 SINE MIR -8 200 23 480 18 0 0 chr5 165810569 165810626 -33819524 + (GA)n Simple_repeat Simple_repeat 1 57 0 351 0 0 0 chr5 165810625 165810664 -33819486 + (TG)n Simple_repeat Simple_repeat 1 39 0 * 220 296 68 30 chr5 165811472 165811604 -33818546 - MIR SINE MIR -22 240 104 1887 155 20 14 chr5 165812277 165812574 -33817576 - AluJo SINE Alu -13 299 1 274 184 24 53 chr5 165812722 165812812 -33817338 - MIR SINE MIR -61 147 77 339 280 20 20 chr5 165813352 165813490 -33816660 - MIR SINE MIR -52 156 25 205 184 41 41 chr5 165813942 165813991 -33816159 + MIR SINE MIR 95 143 -65 237 276 0 0 chr5 165814013 165814071 -33816079 + MER117 DNA MER1_type 15 72 -125 194 129 0 0 chr5 165814071 165814102 -33816048 + L2 LINE L2 3267 3297 -16 570 276 99 10 chr5 165815992 165816184 -33813966 - L3 LINE CR1 -452 1125 917 278 380 18 0 chr5 165816256 165816369 -33813781 + L2 LINE L2 3155 3269 -3 181 261 22 0 chr5 165816376 165816422 -33813728 + MIR SINE MIR 72 118 -90 243 224 224 56 chr5 165816451 165816594 -33813556 + Charlie7 DNA MER1_type 2 168 -2444 675 277 264 6 chr5 165816801 165817115 -33813035 - L2 LINE L2 0 3313 2919 442 318 56 5 chr5 165817387 165817585 -33812565 - MIR SINE MIR -7 255 48 215 167 21 21 chr5 165818028 165818076 -33812074 + MIR SINE MIR 207 254 -8 205 362 133 0 chr5 165818422 165818527 -33811623 + L2 LINE L2 3134 3252 -20 182 252 101 59 chr5 165819407 165819526 -33810624 - MIR3 SINE MIR -42 166 43 231 344 172 8 chr5 165820155 165820283 -33809867 - MIR SINE MIR -1 261 113 478 310 26 13 chr5 165820842 165820997 -33809153 + MIR SINE MIR 60 216 -46 199 296 0 0 chr5 165821100 165821144 -33809006 + L2 LINE L2 3209 3252 -20 1826 125 9 38 chr5 165821605 165821925 -33808225 + L1MC1 LINE L1 6022 6332 -1 280 229 16 0 chr5 165822231 165822292 -33807858 + MIR3 SINE MIR 137 198 -10 413 316 23 8 chr5 165822857 165822990 -33807160 - MIR SINE MIR -126 136 2 210 328 15 0 chr5 165823151 165823218 -33806932 - L3b LINE CR1 -10 1573 1506 320 338 49 14 chr5 165823509 165823651 -33806499 - L3 LINE CR1 -483 1094 948 2455 92 0 0 chr5 165823736 165824040 -33806110 + AluSx SINE Alu 1 304 -8 605 286 102 29 chr5 165824088 165824431 -33805719 + L1MC4a LINE L1 5615 5975 -146 1554 168 17 34 chr5 165824431 165824728 -33805422 + AluJo SINE Alu 21 312 0 605 286 102 29 chr5 165824728 165824763 -33805387 + L1MC4a LINE L1 5975 6006 -115 418 253 30 0 chr5 165825044 165825143 -33805007 + AluJo SINE Alu 113 214 -88 361 283 36 7 chr5 165825464 165825602 -33804548 + L1ME3A LINE L1 5717 5858 -312 1692 161 18 11 chr5 165825602 165825876 -33804274 - AluJb SINE Alu -36 276 1 1647 141 69 0 chr5 165826146 165826450 -33803700 - L1PA16 LINE L1 0 6166 5842 260 358 21 42 chr5 165827237 165827430 -33802720 - MIR3 SINE MIR -1 207 19 1105 184 173 32 chr5 165827794 165828141 -33802009 - MSTD LTR MaLR 0 396 1 247 349 48 7 chr5 165828232 165828378 -33801772 - MIR SINE MIR 0 262 111 375 168 25 109 chr5 165828470 165828589 -33801561 + MER5A DNA MER1_type 78 186 -3 181 299 60 0 chr5 165828746 165828813 -33801337 + MIR SINE MIR 42 112 -96 217 175 0 0 chr5 165829084 165829124 -33801026 + MIR SINE MIR 104 143 -65 579 301 42 106 chr5 165829136 165829655 -33800495 - L2 LINE L2 0 3313 2828 395 159 191 8 chr5 165830065 165830141 -33800009 + MIR SINE MIR 90 151 -111 2305 82 14 7 chr5 165830141 165830435 -33799715 + AluSx SINE Alu 1 296 -16 395 159 191 8 chr5 165830435 165830484 -33799666 + MIR SINE MIR 151 238 -24 696 218 169 9 chr5 165831044 165831283 -33798867 + MIR SINE MIR 5 262 0 27 29 0 0 chr5 165831903 165831937 -33798213 + GC_rich Low_complexity Low_complexity 1 34 0 217 327 72 7 chr5 165832129 165832282 -33797868 - MIR3 SINE MIR -16 192 30 254 321 186 7 chr5 165832439 165832579 -33797571 - MIR SINE MIR -71 191 27 273 222 12 25 chr5 165833515 165833596 -33796554 - LTR37B LTR ERV1 -388 80 1 356 244 101 60 chr5 165833699 165833867 -33796283 - MIR3 SINE MIR -32 176 2 483 275 164 10 chr5 165833920 165834127 -33796023 + MIR SINE MIR 17 255 -7 243 61 0 0 chr5 165834439 165834472 -33795678 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 600 273 128 13 chr5 165834658 165834885 -33795265 - MIR SINE MIR -2 260 8 394 275 20 80 chr5 165834909 165834960 -33795190 - MIR3 SINE MIR -4 204 151 2485 80 3 6 chr5 165834960 165835271 -33794879 + AluSq SINE Alu 1 310 -3 394 275 20 80 chr5 165835271 165835419 -33794731 - MIR3 SINE MIR -56 152 17 242 325 39 0 chr5 165836014 165836091 -33794059 + MIR SINE MIR 111 190 -72 262 254 0 0 chr5 165836955 165837014 -33793136 - L2 LINE L2 -59 3213 3155 360 266 7 14 chr5 165837378 165837521 -33792629 + (CA)n Simple_repeat Simple_repeat 2 143 0 231 308 51 0 chr5 165838511 165838589 -33791561 + MIR SINE MIR 64 145 -63 1893 136 26 19 chr5 165838640 165838949 -33791201 + AluJb SINE Alu 1 311 -1 247 288 0 0 chr5 165839128 165839187 -33790963 - L2 LINE L2 -59 3213 3155 837 182 39 28 chr5 165839196 165839377 -33790773 - MER3 DNA MER1_type -26 183 1 363 272 102 27 chr5 165839462 165839609 -33790541 - L2 LINE L2 -181 3091 2934 327 212 246 8 chr5 165839874 165839992 -33790158 - MIR3 SINE MIR -43 165 20 495 205 71 0 chr5 165840001 165840113 -33790037 - MER3 DNA MER1_type -79 130 11 453 273 149 19 chr5 165840568 165840729 -33789421 + MIR3 SINE MIR 13 194 -14 330 296 169 16 chr5 165840811 165841000 -33789150 - MIR SINE MIR -2 260 43 205 372 0 33 chr5 165841318 165841439 -33788711 + MER5A DNA MER1_type 67 183 -6 373 302 85 21 chr5 165841662 165841851 -33788299 - L3 LINE CR1 -7 1570 1370 242 301 72 85 chr5 165841901 165841985 -33788165 + L2 LINE L2 2827 2911 -361 2366 113 0 3 chr5 165841985 165842295 -33787855 - AluSg SINE Alu -1 309 1 242 301 72 85 chr5 165842295 165842446 -33787704 + L2 LINE L2 2911 3059 -213 1070 221 0 0 chr5 165842578 165842777 -33787373 + MER20 DNA MER1_type 2 200 -19 294 314 114 0 chr5 165842808 165842913 -33787237 + L2 LINE L2 3151 3267 -5 2579 71 0 3 chr5 165843096 165843406 -33786744 + AluY SINE Alu 1 309 -2 223 317 41 41 chr5 165843709 165843832 -33786318 + MIR SINE MIR 27 149 -113 224 179 0 0 chr5 165843950 165843989 -33786161 - MER5B DNA MER1_type 0 178 140 709 194 36 18 chr5 165843989 165844154 -33785996 + MER5B DNA MER1_type 11 178 0 506 313 12 6 chr5 165844614 165844777 -33785373 - MIR3 SINE MIR -11 197 34 181 262 48 24 chr5 165845162 165845246 -33784904 - MIR SINE MIR -19 243 158 243 0 0 0 chr5 165846046 165846073 -33784077 + (CA)n Simple_repeat Simple_repeat 2 28 0 191 234 51 95 chr5 165847019 165847156 -33782994 + L2 LINE L2 2917 3047 -225 2091 124 9 22 chr5 165847218 165847533 -33782617 - AluSq SINE Alu -2 311 1 236 239 163 11 chr5 165847732 165847824 -33782326 - MIR SINE MIR -144 118 13 527 246 82 12 chr5 165848051 165848222 -33781928 + MIR3 SINE MIR 16 198 -10 229 304 29 0 chr5 165848224 165848293 -33781857 + MIR SINE MIR 77 147 -61 1519 160 63 24 chr5 165848415 165848702 -33781448 - AluJo SINE Alu -14 298 1 320 281 67 29 chr5 165849011 165849169 -33780981 + MIR3 SINE MIR 19 185 -23 216 319 0 0 chr5 165849380 165849452 -33780698 + L2 LINE L2 3201 3272 0 232 296 37 74 chr5 165850129 165850264 -33779886 - MIR SINE MIR -16 246 117 337 279 41 25 chr5 165850460 165850582 -33779568 - MIR3 SINE MIR -7 201 78 2450 97 3 0 chr5 165850650 165850960 -33779190 + AluSp SINE Alu 2 312 -1 481 292 36 12 chr5 165851586 165851754 -33778396 - MIR3 SINE MIR -14 194 23 2201 134 0 0 chr5 165853220 165853525 -33776625 + AluSx SINE Alu 1 305 -7 1023 224 48 22 chr5 165853525 165853785 -33776365 + L1MB7 LINE L1 5885 6154 -30 2337 119 0 0 chr5 165853785 165854095 -33776055 - AluSx SINE Alu -2 310 1 1645 217 106 0 chr5 165854694 165855109 -33775041 + MLT1C LTR MaLR 4 462 -5 699 288 46 5 chr5 165855186 165855405 -33774745 + MIR SINE MIR 23 250 -12 251 188 0 0 chr5 165855597 165855645 -33774505 + L2 LINE L2 3138 3185 -87 815 212 57 57 chr5 165855675 165855887 -33774263 - MER20 DNA MER1_type -5 214 3 271 281 24 12 chr5 165856404 165856486 -33773664 - MER5A DNA MER1_type -8 181 99 606 175 0 71 chr5 165856502 165856628 -33773522 + MER5A DNA MER1_type 1 117 -72 328 185 0 46 chr5 165856628 165856673 -33773477 - MER81 DNA DNA -2 112 69 536 101 13 0 chr5 165856673 165856752 -33773398 + MADE1 DNA Mariner 1 80 0 328 185 0 46 chr5 165856752 165856771 -33773379 - MER81 DNA DNA -45 69 51 224 119 48 0 chr5 165857502 165857544 -33772606 + L2 LINE L2 3024 3067 -205 275 224 267 26 chr5 165857808 165857924 -33772226 + MIR SINE MIR 17 160 -102 936 217 16 30 chr5 165857991 165858240 -33771910 - MIR SINE MIR 0 262 20 249 228 51 51 chr5 165858309 165858388 -33771762 + HsTC2 DNA Tc2 4 82 -1816 242 171 35 41 chr5 165858673 165858843 -33771307 + (TG)n Simple_repeat Simple_repeat 1 169 0 211 97 42 56 chr5 165858901 165858973 -33771177 + (TG)n Simple_repeat Simple_repeat 2 72 0 281 284 26 26 chr5 165859618 165859734 -33770416 + MIR SINE MIR 22 137 -71 668 298 80 8 chr5 165859751 165859989 -33770161 - MIR SINE MIR -1 261 7 437 146 85 0 chr5 165860235 165860317 -33769833 - MER117 DNA MER1_type -107 90 2 219 215 154 0 chr5 165860368 165860433 -33769717 - MIR SINE MIR -186 76 2 324 179 234 28 chr5 165861122 165861267 -33768883 - MER113 DNA MER1_type? -345 176 2 203 237 76 93 chr5 165861866 165861984 -33768166 - MIR3 SINE MIR -14 194 79 481 258 84 56 chr5 165862260 165862389 -33767761 + L1MC4a LINE L1 5577 5701 -2107 1657 141 57 0 chr5 165862389 165862637 -33767513 - AluJb SINE Alu -14 298 37 1792 100 32 32 chr5 165862637 165862887 -33767263 - AluSx SINE Alu -61 251 1 481 258 84 56 chr5 165862887 165863112 -33767038 + L1MC4a LINE L1 5700 5942 -1866 1589 186 53 0 chr5 165863349 165863634 -33766516 + AluJb SINE Alu 2 301 -11 1547 150 43 28 chr5 165863640 165863917 -33766233 + L1MB3 LINE L1 5852 6136 -47 2288 109 3 3 chr5 165863917 165864221 -33765929 + AluSq SINE Alu 1 304 -9 1547 150 43 28 chr5 165864221 165864270 -33765880 + L1MB3 LINE L1 6136 6183 0 2464 182 38 33 chr5 165864502 165865112 -33765038 + L1MB8 LINE L1 5561 6173 -5 2473 96 0 6 chr5 165865128 165865442 -33764708 + AluSx SINE Alu 1 312 0 24 0 0 0 chr5 165865498 165865522 -33764628 + AT_rich Low_complexity Low_complexity 1 24 0 371 288 98 31 chr5 165865865 165866112 -33764038 + L1ME4a LINE L1 5757 6068 -53 180 231 26 0 chr5 165866437 165866476 -33763674 + L2 LINE L2 3274 3313 0 365 220 190 0 chr5 165867374 165867474 -33762676 - L2 LINE L2 -4 3309 3191 484 217 26 0 chr5 165867600 165867715 -33762435 + MIR3 SINE MIR 70 187 -21 414 219 68 55 chr5 165868060 165868206 -33761944 + MIR SINE MIR 104 251 -11 222 375 62 0 chr5 165868841 165869017 -33761133 + L2 LINE L2 2553 2739 -575 2131 129 0 16 chr5 165869060 165869227 -33760923 - AluJb SINE Alu -14 298 137 2287 122 3 0 chr5 165869227 165869531 -33760619 - AluSx SINE Alu -7 305 1 2131 129 0 16 chr5 165869531 165869666 -33760484 - AluJb SINE Alu -175 137 1 611 257 29 0 chr5 165869701 165869841 -33760309 - MER45A DNA AcHobo -33 145 2 380 245 49 65 chr5 165870472 165870656 -33759494 + L1ME4a LINE L1 5940 6120 -1 1827 153 73 0 chr5 165870683 165870958 -33759192 - AluJb SINE Alu -17 295 1 350 253 33 11 chr5 165871140 165871231 -33758919 - L2 LINE L2 0 3313 3221 2325 94 0 7 chr5 165871235 165871534 -33758616 + AluSx SINE Alu 3 299 -13 610 284 87 9 chr5 165871979 165872208 -33757942 + MIR SINE MIR 14 260 -2 247 302 57 0 chr5 165872372 165872478 -33757672 - MIR SINE MIR -65 143 32 893 264 138 7 chr5 165872539 165872835 -33757315 + MLT1K LTR MaLR 216 550 -38 564 273 49 16 chr5 165874027 165874210 -33755940 + MIR3 SINE MIR 6 194 -14 380 289 0 0 chr5 165874697 165874794 -33755356 - MIR3 SINE MIR -53 155 59 375 113 0 0 chr5 165875335 165875397 -33754753 + (GA)n Simple_repeat Simple_repeat 1 62 0 347 225 58 42 chr5 165875751 165875871 -33754279 + L2 LINE L2 3192 3313 0 1800 164 52 0 chr5 165875873 165876159 -33753991 + AluJb SINE Alu 1 301 -11 748 251 69 69 chr5 165876174 165876521 -33753629 + MER113 DNA MER1_type? 142 488 -33 402 241 15 51 chr5 165876568 165876705 -33753445 - MIR3 SINE MIR -11 197 66 380 128 13 0 chr5 165877330 165877408 -33752742 + (CA)n Simple_repeat Simple_repeat 2 80 0 2501 81 0 3 chr5 165877509 165877816 -33752334 - AluSq SINE Alu -7 306 1 192 209 90 15 chr5 165877976 165878043 -33752107 + L2 LINE L2 3200 3271 -1 758 220 60 40 chr5 165879170 165879370 -33750780 + MER63A DNA MER1_type 7 210 0 434 256 7 29 chr5 165879502 165879639 -33750511 - MER103 DNA DNA -31 135 2 1832 147 44 0 chr5 165880496 165880800 -33749350 - AluSq SINE Alu 0 316 1 1762 142 0 71 chr5 165881025 165881349 -33748801 - AluJo SINE Alu -3 309 9 296 140 0 18 chr5 165882690 165882747 -33747403 - MIR SINE MIR -62 146 91 184 222 0 0 chr5 165882761 165882797 -33747353 + MIR SINE MIR 46 81 -181 379 258 132 0 chr5 165882872 165883000 -33747150 + MIR SINE MIR 115 261 -1 385 53 0 35 chr5 165883676 165883733 -33746417 + MADE1 DNA Mariner 1 55 -25 381 68 34 0 chr5 165883833 165883892 -33746258 + MADE1 DNA Mariner 20 80 0 286 313 63 93 chr5 165884178 165884261 -33745889 + L2 LINE L2 2864 2948 -324 1577 155 18 105 chr5 165884261 165884641 -33745509 - MER7A DNA MER2_type 0 346 2 286 313 63 93 chr5 165884641 165884953 -33745197 + L2 LINE L2 2948 3247 -25 222 289 11 67 chr5 165885034 165885124 -33745026 + L2 LINE L2 3229 3313 0 456 266 18 92 chr5 165886590 165886819 -33743331 - Charlie8 DNA MER1_type -2203 214 3 295 328 112 39 chr5 165887491 165888049 -33742101 + L2 LINE L2 2592 3312 -1 332 295 45 28 chr5 165888409 165888430 -33741720 + MIR SINE MIR 34 53 -200 2422 130 44 2 chr5 165888430 165888839 -33741311 + MSTA LTR MaLR 3 428 0 332 295 45 28 chr5 165888839 165888997 -33741153 + MIR SINE MIR 53 210 -43 273 244 244 13 chr5 165889788 165889944 -33740206 - MIR SINE MIR -2 260 69 263 333 32 32 chr5 165889987 165890113 -33740037 + L2 LINE L2 3161 3286 -27 426 292 76 7 chr5 165890594 165890738 -33739412 - MIR3 SINE MIR -38 170 17 252 0 0 0 chr5 165891516 165891544 -33738606 + (TA)n Simple_repeat Simple_repeat 2 29 0 692 192 0 0 chr5 165891544 165891664 -33738486 - FLAM_C SINE Alu -22 121 2 306 353 37 7 chr5 165892207 165892343 -33737807 - L2 LINE L2 -17 3255 3116 1996 150 7 13 chr5 165893138 165893444 -33736706 + AluSx SINE Alu 3 306 -6 183 197 70 56 chr5 165893579 165893650 -33736500 + L2 LINE L2 3201 3272 0 282 268 47 9 chr5 165894019 165894161 -33735989 - MIR SINE MIR -92 116 19 495 246 9 18 chr5 165894613 165894727 -33735423 + L2 LINE L2 3160 3272 0 267 235 33 158 chr5 165894752 165895024 -33735126 - L2 LINE L2 -216 3056 2819 315 192 14 14 chr5 165895200 165895273 -33734877 - MER116 DNA Mariner -1 79 7 201 227 45 0 chr5 165896540 165896584 -33733566 + (CATG)n Simple_repeat Simple_repeat 1 46 0 1576 189 73 0 chr5 165897736 165898011 -33732139 - AluJb SINE Alu -17 295 1 830 302 58 12 chr5 165898269 165898633 -33731517 + MLT1K LTR MaLR 98 546 -42 249 279 180 27 chr5 165899209 165899320 -33730830 - MIR SINE MIR -112 150 23 269 339 187 22 chr5 165899465 165899695 -33730455 - L2 LINE L2 -19 3294 3027 200 247 41 14 chr5 165899721 165899794 -33730356 - L2 LINE L2 -369 2903 2829 2015 148 3 19 chr5 165899831 165900141 -33730009 + AluJb SINE Alu 1 305 -7 2296 91 3 0 chr5 165900398 165900685 -33729465 - AluSg SINE Alu -22 288 1 1968 135 10 6 chr5 165900738 165901049 -33729101 + AluSx SINE Alu 1 312 0 228 243 122 14 chr5 165901053 165901127 -33729023 + L3 LINE CR1 1286 1367 -210 183 322 72 44 chr5 165901179 165901359 -33728791 + MIR SINE MIR 78 262 0 180 0 0 0 chr5 165901510 165901530 -33728620 + (CAGCT)n Simple_repeat Simple_repeat 1 20 0 298 297 68 42 chr5 165902207 165902325 -33727825 - MIR3 SINE MIR -31 177 94 356 221 103 19 chr5 165902432 165902574 -33727576 + MIR SINE MIR 36 145 -63 560 241 105 0 chr5 165903058 165903220 -33726930 + MIR SINE MIR 84 262 0 631 289 100 2 chr5 165903247 165903484 -33726666 + MIR SINE MIR 3 262 0 625 228 33 44 chr5 165904142 165904322 -33725828 - MER5B DNA MER1_type 0 178 1 851 228 171 19 chr5 165904507 165904823 -33725327 + LTR37A LTR ERV1 53 416 -10 204 318 59 0 chr5 165904970 165905055 -33725095 - MIR SINE MIR -60 148 59 351 324 0 9 chr5 165905061 165905166 -33724984 - L2 LINE L2 -9 3304 3201 333 0 0 0 chr5 165905199 165905236 -33724914 + (TA)n Simple_repeat Simple_repeat 1 37 0 327 267 10 10 chr5 165905319 165905420 -33724730 - Charlie7 DNA MER1_type -2511 101 1 186 222 22 22 chr5 165905634 165905679 -33724471 - L3b LINE CR1 -3 1580 1536 183 227 0 45 chr5 165905693 165905737 -33724413 + MIR SINE MIR 34 75 -187 871 244 23 41 chr5 165905747 165906013 -33724137 + MIR SINE MIR 2 262 0 230 259 99 46 chr5 165906677 165906808 -33723342 - MIR3 SINE MIR -53 155 18 254 269 97 11 chr5 165907784 165907877 -33722273 - MIR SINE MIR -74 134 34 294 310 142 7 chr5 165908797 165908952 -33721198 - MIR3 SINE MIR -3 205 30 307 279 114 7 chr5 165909025 165909165 -33720985 - MIR SINE MIR -52 210 56 871 256 105 18 chr5 165909294 165909575 -33720575 - L2 LINE L2 -303 3010 2714 4288 167 5 51 chr5 165909581 165909874 -33720276 - L1MB5 LINE L1 -12 6162 5857 2260 96 33 0 chr5 165909874 165910175 -33719975 - AluSp SINE Alu -2 311 1 4288 167 5 51 chr5 165910175 165910233 -33719917 - L1MB5 LINE L1 -317 5857 5798 2112 123 7 13 chr5 165910233 165910534 -33719616 - AluSq SINE Alu -14 299 1 4288 167 5 51 chr5 165910534 165910907 -33719243 - L1MB5 LINE L1 -376 5798 5487 1866 158 27 3 chr5 165910907 165911204 -33718946 + AluJb SINE Alu 1 304 -8 4288 167 5 51 chr5 165911204 165911425 -33718725 - L1MB5 LINE L1 -687 5487 5258 2153 120 0 10 chr5 165911429 165911728 -33718422 - AluSx SINE Alu -16 296 1 290 186 49 59 chr5 165911730 165911832 -33718318 - L2 LINE L2 -601 2713 2613 355 125 62 0 chr5 165911932 165912028 -33718122 - L1M LINE L1 -815 5359 5258 2143 121 0 10 chr5 165912032 165912330 -33717820 - AluSx SINE Alu -17 295 1 2647 220 185 43 chr5 165912332 165912793 -33717357 - L2 LINE L2 -601 2713 2319 2915 123 9 26 chr5 165912793 165913129 -33717021 + MER83 LTR ERV1 1 328 -120 2264 116 13 0 chr5 165913129 165913431 -33716719 - AluSg SINE Alu -3 307 2 2915 123 9 26 chr5 165913431 165913548 -33716602 + MER83 LTR ERV1 328 446 -2 2647 220 185 43 chr5 165913548 165913595 -33716555 - L2 LINE L2 -995 2319 2280 1992 112 49 3 chr5 165913595 165913880 -33716270 + AluSx SINE Alu 1 298 -14 2647 220 185 43 chr5 165913880 165914396 -33715754 - L2 LINE L2 -1034 2280 1542 180 337 67 11 chr5 165914442 165914531 -33715619 - MIR SINE MIR -164 98 5 258 206 32 0 chr5 165914560 165914623 -33715527 + L1MC4a LINE L1 5606 5670 -451 1678 150 23 49 chr5 165914650 165914957 -33715193 - AluJb SINE Alu -13 299 1 1322 135 10 10 chr5 165914957 165915165 -33714985 - AluJb SINE Alu -3 309 102 4125 95 23 16 chr5 165915190 165915556 -33714594 - L1PB1 LINE L1 -1 6150 5777 2267 93 7 7 chr5 165915556 165915856 -33714294 - AluSx SINE Alu -12 300 1 4125 95 23 16 chr5 165915856 165916101 -33714049 - L1PB1 LINE L1 -374 5777 5535 355 305 81 41 chr5 165916902 165917099 -33713051 + MIR SINE MIR 47 251 -11 184 143 0 95 chr5 165917413 165917455 -33712695 + L2 LINE L2 2937 2974 -340 1713 174 61 0 chr5 165917554 165917847 -33712303 - AluJb SINE Alu -1 311 1 206 81 27 0 chr5 165917860 165917897 -33712253 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 867 127 0 0 chr5 165917898 165918016 -33712134 - AluJ SINE Alu -193 119 2 21 0 0 0 chr5 165918099 165918120 -33712030 + AT_rich Low_complexity Low_complexity 1 21 0 491 282 24 66 chr5 165918465 165918678 -33711472 - L2 LINE L2 0 3313 3110 391 261 83 39 chr5 165918962 165919142 -33711008 - MIR3 SINE MIR -15 193 6 357 256 41 8 chr5 165919428 165919549 -33710601 + L1MC4a LINE L1 5701 5825 -1983 1130 193 8 53 chr5 165919550 165919794 -33710356 + AluJo SINE Alu 65 297 -15 23 33 0 0 chr5 165919865 165919895 -33710255 + AT_rich Low_complexity Low_complexity 1 30 0 1452 222 46 0 chr5 165920158 165920464 -33709686 - MER58B DNA MER1_type 0 341 22 254 150 0 0 chr5 165921023 165921063 -33709087 - AluJ/FRAM SINE Alu -43 259 220 467 282 70 19 chr5 165921082 165921238 -33708912 + MIR3 SINE MIR 24 187 -21 450 294 110 22 chr5 165921294 165921522 -33708628 + MIR SINE MIR 15 262 0 1253 141 0 0 chr5 165921544 165921721 -33708429 + FRAM SINE Alu 1 175 -1 833 168 0 29 chr5 165922558 165922695 -33707455 + AluJo/FLAM SINE Alu 1 133 -169 2209 134 0 0 chr5 165922695 165923001 -33707149 + AluSq SINE Alu 1 306 -7 214 303 26 59 chr5 165923027 165923058 -33707092 - L2 LINE L2 -661 2653 2623 216 152 0 0 chr5 165923058 165923091 -33707059 - L3 LINE CR1 -498 1079 1047 214 303 26 59 chr5 165923091 165923179 -33706971 - L2 LINE L2 -691 2623 2507 358 323 85 25 chr5 165923419 165923620 -33706530 + MIR SINE MIR 26 238 -24 298 339 31 24 chr5 165923647 165923774 -33706376 + L3 LINE CR1 1426 1553 -24 598 264 93 56 chr5 165923781 165923975 -33706175 + L1ME4a LINE L1 5623 5808 -313 2350 123 0 0 chr5 165923975 165924277 -33705873 + AluSx SINE Alu 1 302 -10 2132 108 38 0 chr5 165924286 165924573 -33705577 + AluSx SINE Alu 1 298 -14 598 264 93 56 chr5 165924573 165924799 -33705351 + L1ME4a LINE L1 5815 6069 -52 2430 93 0 7 chr5 165924801 165925111 -33705039 - AluSg SINE Alu -2 308 1 297 220 88 33 chr5 165926659 165926750 -33703400 + MIR3 SINE MIR 109 204 -4 2016 168 0 0 chr5 165926889 165927187 -33702963 - AluJb SINE Alu -14 298 1 326 299 130 7 chr5 165927193 165927347 -33702803 - MER5B DNA MER1_type -1 177 5 367 248 156 9 chr5 165927217 165927326 -33702824 + MER5A DNA MER1_type 40 164 -25 495 248 60 40 chr5 165927353 165927502 -33702648 - MER5B DNA MER1_type 0 178 27 796 249 36 0 chr5 165927508 165927701 -33702449 - MER3 DNA MER1_type -9 200 1 2185 121 7 0 chr5 165927796 165928094 -33702056 + AluSx SINE Alu 1 300 -12 217 282 282 51 chr5 165928152 165928269 -33701881 - MIR SINE MIR -67 195 52 2396 117 0 0 chr5 165928303 165928611 -33701539 - AluSg SINE Alu -2 308 1 361 296 70 21 chr5 165928642 165928784 -33701366 - MIR3 SINE MIR -30 178 30 431 257 28 22 chr5 165929473 165929652 -33700498 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 549 230 0 9 chr5 165929981 165930094 -33700056 + MIR SINE MIR 31 142 -66 368 335 150 8 chr5 165930137 165930403 -33699747 - L2 LINE L2 -1 3312 3009 193 300 0 0 chr5 165931278 165931328 -33698822 - MIR SINE MIR -58 150 101 284 222 56 28 chr5 165931730 165931802 -33698348 + MIR SINE MIR 41 114 -94 2423 88 0 7 chr5 165932708 165933013 -33697137 - AluY SINE Alu -6 305 3 404 240 10 0 chr5 165933092 165933188 -33696962 - MER103 DNA DNA -7 159 63 190 253 105 0 chr5 165933584 165933679 -33696471 + MIR SINE MIR 79 183 -79 188 219 73 0 chr5 165934071 165934112 -33696038 + MIR SINE MIR 106 149 -113 212 204 38 156 chr5 165934412 165934598 -33695552 - MIR3 SINE MIR -3 205 42 636 287 32 42 chr5 165935271 165935512 -33694638 + MIR SINE MIR 10 243 -19 287 322 161 6 chr5 165937156 165937330 -33692820 - MIR SINE MIR -49 213 13 223 211 0 0 chr5 165937340 165937378 -33692772 + MIR SINE MIR 109 146 -116 394 146 45 0 chr5 165937954 165938043 -33692107 + GA-rich Low_complexity Low_complexity 6 98 0 510 343 42 39 chr5 165938372 165938658 -33691492 + L2 LINE L2 2812 3098 -174 301 314 20 46 chr5 165939440 165939639 -33690511 + MIR SINE MIR 17 212 -37 2210 122 13 0 chr5 165939885 165940188 -33689962 + AluSx SINE Alu 1 307 -5 45 55 0 0 chr5 165940217 165940290 -33689860 + AT_rich Low_complexity Low_complexity 1 73 0 2611 204 43 121 chr5 165940572 165941946 -33688204 + L1ME1 LINE L1 1041 2305 -4235 2088 125 0 16 chr5 165941946 165942250 -33687900 + AluSx SINE Alu 1 299 -13 2611 204 43 121 chr5 165942250 165942284 -33687866 + L1ME1 LINE L1 2305 2340 -4200 3532 229 67 42 chr5 165942412 165942502 -33687648 + L1ME1 LINE L1 2560 2646 -3894 691 94 19 19 chr5 165942502 165942608 -33687542 + L1PA16 LINE L1 6061 6166 0 3532 229 67 42 chr5 165942608 165943306 -33686844 + L1ME1 LINE L1 2646 3325 -3215 1795 171 13 13 chr5 165943306 165943615 -33686535 + AluJo SINE Alu 4 312 0 3532 229 67 42 chr5 165943615 165944350 -33685800 + L1ME1 LINE L1 3325 4227 -2313 1268 219 68 12 chr5 165944350 165944675 -33685475 - MER2 DNA MER2_type 0 344 2 3532 229 67 42 chr5 165944675 165944729 -33685421 + L1ME1 LINE L1 4227 4278 -2262 1481 195 29 36 chr5 165944732 165945039 -33685111 + AluJb SINE Alu 1 305 -7 215 125 25 0 chr5 165945062 165945102 -33685048 + GA-rich Low_complexity Low_complexity 2 42 0 2496 217 99 26 chr5 165945114 165946118 -33684032 + L1ME1 LINE L1 5389 6481 -79 2432 84 0 0 chr5 165946118 165946414 -33683736 + AluSg1 SINE Alu 6 301 -8 2496 217 99 26 chr5 165946414 165946501 -33683649 + L1ME1 LINE L1 6481 6560 0 206 250 0 0 chr5 165946609 165946657 -33683493 - L2 LINE L2 -1 3312 3265 194 203 31 78 chr5 165946845 165946909 -33683241 - MIR SINE MIR -121 141 81 2474 82 0 3 chr5 165946938 165947242 -33682908 + AluSg SINE Alu 1 303 -7 246 125 0 0 chr5 165947242 165947290 -33682860 + (CA)n Simple_repeat Simple_repeat 1 48 0 320 291 77 0 chr5 165947360 165947477 -33682673 + L1ME LINE L1 5574 5699 -422 2196 103 7 29 chr5 165947649 165947959 -33682191 - AluSg SINE Alu -7 303 1 2740 223 49 38 chr5 165948069 165948748 -33681402 + L1MB5 LINE L1 5338 6056 -124 2060 134 20 3 chr5 165948748 165949054 -33681096 + AluJb SINE Alu 1 311 -1 2740 223 49 38 chr5 165949054 165949181 -33680969 + L1MB5 LINE L1 6056 6180 0 373 238 147 68 chr5 165949164 165949592 -33680558 + L1ME4a LINE L1 5586 6047 -74 * 352 298 0 0 chr5 165949700 165949784 -33680366 - MIR SINE MIR -148 114 31 504 0 0 0 chr5 165949794 165949850 -33680300 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 186 43 0 0 chr5 165949870 165949893 -33680257 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 745 203 0 0 chr5 165949893 165950016 -33680134 - FLAM_C SINE Alu -19 124 2 303 214 29 14 chr5 165950197 165950267 -33679883 + L1ME4a LINE L1 6051 6121 0 202 267 109 10 chr5 165950668 165950769 -33679381 - MIR3 SINE MIR -34 174 64 521 303 30 5 chr5 165950915 165951113 -33679037 - L3 LINE CR1 -230 1347 1145 2089 104 4 4 chr5 165951646 165951924 -33678226 - AluSx SINE Alu -17 295 18 592 222 15 1 chr5 165952147 165952291 -33677859 - L1MC4 LINE L1 -226 7648 7438 180 370 0 0 chr5 165952319 165952373 -33677777 + L2 LINE L2 3025 3078 -194 568 262 55 75 chr5 165952467 165952814 -33677336 - MLT1I LTR MaLR -4 405 66 244 299 84 28 chr5 165952841 165952948 -33677202 + L2 LINE L2 3141 3253 -19 21 0 0 0 chr5 165953207 165953228 -33676922 + AT_rich Low_complexity Low_complexity 1 21 0 1773 170 0 22 chr5 165953576 165953887 -33676263 + AluJo SINE Alu 1 304 -8 525 223 51 135 chr5 165953887 165954161 -33675989 + MER102a DNA MER1_type 79 329 -1 379 289 59 7 chr5 165954281 165954433 -33675717 + MIR SINE MIR 61 220 -42 888 269 8 43 chr5 165954450 165954703 -33675447 - MIR SINE MIR -17 245 2 2389 87 13 10 chr5 165954729 165955041 -33675109 + AluSq SINE Alu 1 313 0 317 279 0 49 chr5 165955052 165955174 -33674976 - L1MC4 LINE L1 -1319 6723 6608 205 89 81 32 chr5 165955180 165955304 -33674846 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 306 178 67 44 chr5 165955306 165955396 -33674754 + L1MC4 LINE L1 6612 6703 -1339 188 98 16 49 chr5 165955399 165955460 -33674690 + (TA)n Simple_repeat Simple_repeat 2 60 0 283 217 28 36 chr5 165955470 165955536 -33674614 - MER5A DNA MER1_type -79 110 38 1926 147 7 23 chr5 165955536 165955836 -33674314 - AluJb SINE Alu -17 295 1 283 217 28 36 chr5 165955836 165955864 -33674286 - MER5A DNA MER1_type -151 38 11 523 352 60 18 chr5 165955871 165956155 -33673995 - L3 LINE CR1 -47 1530 1235 21 57 0 0 chr5 165956317 165956352 -33673798 + AT_rich Low_complexity Low_complexity 1 35 0 860 125 49 0 chr5 165956359 165956503 -33673647 - L1PA16 LINE L1 -1 6165 6015 230 0 0 32 chr5 165956503 165956534 -33673616 + (TCCC)n Simple_repeat Simple_repeat 4 33 0 882 264 7 68 chr5 165956543 165956838 -33673312 - L3 LINE CR1 -354 1223 947 832 110 98 46 chr5 165957389 165957562 -33672588 - MER21A LTR ERV1 0 931 750 2224 168 40 5 chr5 165957581 165957981 -33672169 - MER21B LTR ERV1 -270 593 180 29 28 0 0 chr5 165958054 165958090 -33672060 + AT_rich Low_complexity Low_complexity 1 36 0 621 86 0 0 chr5 165958093 165958174 -33671976 - AluSg/x SINE Alu -22 287 207 1994 109 0 4 chr5 165958175 165958432 -33671718 - AluSc SINE Alu -53 256 1 2016 135 28 0 chr5 165958432 165958720 -33671430 - AluSx SINE Alu -16 296 1 189 0 0 0 chr5 165958790 165958811 -33671339 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2449 61 0 0 chr5 165958813 165959093 -33671057 - AluY SINE Alu -31 280 1 250 179 15 15 chr5 165959356 165959423 -33670727 + GA-rich Low_complexity Low_complexity 3 69 0 2068 152 0 3 chr5 165959470 165959773 -33670377 + AluSx SINE Alu 1 302 -10 429 187 97 116 chr5 165960272 165960427 -33669723 + MIR3 SINE MIR 34 185 -23 239 198 214 56 chr5 165960425 165960551 -33669599 - MIR SINE MIR -70 192 47 * 304 284 164 26 chr5 165960567 165960683 -33669467 + MIR SINE MIR 1 132 -130 184 236 36 36 chr5 165960811 165960866 -33669284 + MIR SINE MIR 91 145 -63 2143 155 0 0 chr5 165961072 165961382 -33668768 - AluJb SINE Alu -2 310 1 497 265 144 63 chr5 165961415 165961764 -33668386 - L1ME4a LINE L1 -1 6120 5698 2289 105 3 16 chr5 165961764 165962079 -33668071 + AluSx SINE Alu 1 311 -1 497 265 144 63 chr5 165962079 165962114 -33668036 - L1ME4a LINE L1 -423 5698 5667 2173 129 7 0 chr5 165962188 165962483 -33667667 + AluSx SINE Alu 1 297 -15 363 357 27 32 chr5 165962897 165963021 -33667129 + MER5A DNA MER1_type 1 125 -64 2406 95 0 7 chr5 165963021 165963327 -33666823 - AluSx SINE Alu -8 304 1 363 357 27 32 chr5 165963327 165963387 -33666763 + MER5A DNA MER1_type 125 184 -5 379 311 142 7 chr5 165963696 165963844 -33666306 + MIR3 SINE MIR 17 184 -24 805 286 163 51 chr5 165963979 165964545 -33665605 + L3 LINE CR1 947 1575 -2 2363 90 0 19 chr5 165964745 165965055 -33665095 - AluY SINE Alu -7 304 1 308 251 42 86 chr5 165965455 165965622 -33664528 - MIR3 SINE MIR -22 186 28 215 167 0 0 chr5 165966389 165966425 -33663725 - MIR SINE MIR -62 146 111 365 308 75 19 chr5 165966770 165966929 -33663221 + MIR3 SINE MIR 29 196 -12 2125 109 0 0 chr5 165967495 165967762 -33662388 - AluSx SINE Alu -45 267 1 2413 74 3 13 chr5 165967910 165968219 -33661931 - AluSx SINE Alu -6 306 1 1800 125 80 6 chr5 165968404 165968715 -33661435 + L1MA4A LINE L1 5965 6298 -5 1629 174 90 11 chr5 165968958 165969337 -33660813 - MLT1C LTR MaLR -6 461 53 382 234 135 27 chr5 165970155 165970469 -33659681 + Tigger8 DNA MER2_type 188 551 -115 434 264 100 34 chr5 165970985 165971254 -33658896 + L1ME4a LINE L1 5762 6048 -73 551 286 154 0 chr5 165971350 165971570 -33658580 - L3 LINE CR1 -74 1503 1250 496 277 17 0 chr5 165971775 165971894 -33658256 - MIR SINE MIR -57 205 85 429 256 54 29 chr5 165973057 165973217 -33656933 + MIR SINE MIR 22 149 -59 475 309 79 11 chr5 165973595 165973773 -33656377 + MIR3 SINE MIR 7 196 -12 380 275 114 30 chr5 165973989 165974156 -33655994 - MIR3 SINE MIR -4 204 24 480 243 191 0 chr5 165974881 165975033 -33655117 - MER5A DNA MER1_type -8 181 1 296 183 110 37 chr5 165975033 165975114 -33655036 - MIR3 SINE MIR -43 165 79 528 272 108 15 chr5 165975851 165976046 -33654104 - MIR SINE MIR -2 260 48 1066 179 123 5 chr5 165976067 165976279 -33653871 - AluJo SINE Alu -69 243 7 2095 119 0 0 chr5 165976347 165976624 -33653526 - AluSx SINE Alu -8 304 28 751 225 62 11 chr5 165977126 165977304 -33652846 + MER5A DNA MER1_type 3 189 0 276 285 70 35 chr5 165977339 165977511 -33652639 + L1ME LINE L1 5653 5824 -297 1057 182 0 0 chr5 165977610 165977775 -33652375 - AluJb SINE Alu -18 294 130 2306 122 0 0 chr5 165977793 165978089 -33652061 + AluSx SINE Alu 1 296 -16 1450 121 40 0 chr5 165978101 165978300 -33651850 + AluSx SINE Alu 1 207 -105 1823 100 35 11 chr5 165978300 165978561 -33651589 + AluY SINE Alu 41 307 -4 218 261 92 0 chr5 165978794 165978859 -33651291 + MIR3 SINE MIR 86 156 -52 1573 203 19 29 chr5 165978911 165979226 -33650924 + AluJo SINE Alu 1 312 0 857 269 69 62 chr5 165979452 165979858 -33650292 - MLT1I LTR MaLR 0 409 1 526 254 36 0 chr5 165979896 165980006 -33650144 - MER81 DNA DNA 0 114 1 285 318 35 0 chr5 165980340 165980425 -33649725 - L3 LINE CR1 -63 1514 1427 2425 86 0 3 chr5 165980644 165980945 -33649205 - AluSp SINE Alu -13 300 1 523 108 12 0 chr5 165981091 165981174 -33648976 + L1MA4 LINE L1 6197 6280 -20 312 268 95 82 chr5 165981492 165981873 -33648277 + MLT1J LTR MaLR 7 422 -89 1162 114 14 46 chr5 165981897 165982116 -33648034 + L1MA4 LINE L1 6084 6295 -5 1878 129 4 0 chr5 165982351 165982607 -33647543 + AluSx SINE Alu 1 257 -55 198 289 52 82 chr5 165982687 165982822 -33647328 + MER5A DNA MER1_type 2 132 -57 201 133 0 0 chr5 165982894 165982924 -33647226 + (GATTG)n Simple_repeat Simple_repeat 3 32 0 2133 135 0 3 chr5 165983206 165983502 -33646648 - AluJb SINE Alu -17 295 1 653 209 196 0 chr5 165983604 165983762 -33646388 + MER5A DNA MER1_type 1 189 0 385 291 46 46 chr5 165984805 165985001 -33645149 - MER102b DNA MER1_type -10 331 136 1169 167 6 0 chr5 165985001 165985175 -33644975 - FAM SINE Alu 0 175 1 1826 185 10 0 chr5 165985179 165985476 -33644674 - AluJb SINE Alu -11 301 2 233 271 0 71 chr5 165985656 165985741 -33644409 - L2 LINE L2 -202 3070 2992 331 319 43 56 chr5 165986548 165986617 -33643533 + L3 LINE CR1 1317 1385 -192 2052 127 0 0 chr5 165986617 165986893 -33643257 + AluSg SINE Alu 1 276 -34 255 31 0 0 chr5 165986897 165986929 -33643221 + (CAGG)n Simple_repeat Simple_repeat 2 33 0 331 319 43 56 chr5 165986929 165987086 -33643064 + L3 LINE CR1 1388 1545 -32 2419 107 0 0 chr5 165987141 165987449 -33642701 - AluSc SINE Alu -1 308 1 3089 116 98 91 chr5 165987500 165987742 -33642408 + L1MA10 LINE L1 5524 5763 -571 2349 100 7 3 chr5 165987742 165988052 -33642098 + AluSx SINE Alu 1 311 -1 3089 116 98 91 chr5 165988052 165988489 -33641661 + L1MA10 LINE L1 5763 6208 -126 440 72 0 14 chr5 165990768 165990837 -33639313 + L1MA10 LINE L1 6258 6325 -9 2329 57 7 3 chr5 165990837 165991148 -33639002 - AluY SINE Alu 0 312 1 194 295 49 0 chr5 165991251 165991312 -33638838 + L2 LINE L2 3206 3269 -3 415 309 139 26 chr5 165991422 165991652 -33638498 - MIR SINE MIR -4 258 3 426 290 84 15 chr5 165992166 165992297 -33637853 + MIR3 SINE MIR 23 162 -46 480 225 100 40 chr5 165992398 165992413 -33637737 + Charlie8 DNA MER1_type 30 43 -2374 2157 121 0 6 chr5 165992413 165992726 -33637424 - AluSx SINE Alu -1 311 1 480 225 100 40 chr5 165992726 165992910 -33637240 + Charlie8 DNA MER1_type 43 241 -2176 185 250 39 19 chr5 165993416 165993468 -33636682 + MIR SINE MIR 3 55 -207 1209 124 10 36 chr5 165993563 165993757 -33636393 + AluSq SINE Alu 108 296 -17 1996 165 70 34 chr5 165993808 165994251 -33635899 - LTR2B LTR ERV1 0 490 32 522 270 169 0 chr5 165994475 165994623 -33635527 + MER5A DNA MER1_type 10 182 -7 549 253 173 0 chr5 165994634 165994784 -33635366 - MER5B DNA MER1_type 0 178 3 242 280 147 0 chr5 165995057 165995132 -33635018 + MIR SINE MIR 30 115 -93 418 249 32 104 chr5 165995138 165995245 -33634905 - Charlie8 DNA MER1_type -2211 206 122 2143 55 23 71 chr5 165995245 165995553 -33634597 - AluSg SINE Alu -12 298 6 418 249 32 104 chr5 165995553 165995666 -33634484 - Charlie8 DNA MER1_type -2295 122 2 2101 74 42 165 chr5 165995710 165996140 -33634010 - MER51B LTR ERV1 0 377 1 1941 134 30 13 chr5 165996322 165996621 -33633529 - AluJb SINE Alu -8 304 1 562 244 49 37 chr5 165996755 165996919 -33633231 - MER5B DNA MER1_type -9 169 4 226 256 154 39 chr5 165996996 165997152 -33632998 + L2 LINE L2 3021 3194 -119 428 203 29 67 chr5 165997251 165997387 -33632763 - MIR SINE MIR -45 163 38 2064 132 41 64 chr5 165998147 165998262 -33631888 - MER51A LTR ERV1 0 634 518 1956 111 3 7 chr5 165998262 165998559 -33631591 + AluSx SINE Alu 3 298 -14 2064 132 41 64 chr5 165998559 165998826 -33631324 - MER51A LTR ERV1 -116 518 196 1622 138 59 14 chr5 165998826 165999116 -33631034 + AluSx SINE Alu 1 303 -9 2064 132 41 64 chr5 165999116 165999308 -33630842 - MER51A LTR ERV1 -438 196 1 2115 150 9 0 chr5 165999314 165999640 -33630510 - MER51A-int LTR ERV1 -4 7812 7484 1633 300 56 30 chr5 165999795 166000852 -33629298 - MER51A-int LTR ERV1 -1675 6081 4633 309 267 39 39 chr5 166000962 166001133 -33629017 - MER51A-int LTR ERV1 -5018 3619 2637 547 313 9 39 chr5 166001892 166002227 -33627923 - MER51A-int LTR ERV1 -4010 2666 2342 439 321 21 50 chr5 166002872 166003152 -33626998 - MER51A-int LTR ERV1 -5277 1814 1543 359 274 12 77 chr5 166003171 166003339 -33626811 - MER51A-int LTR ERV1 -6967 849 693 2282 72 3 0 chr5 166003371 166003664 -33626486 - AluY SINE Alu -16 295 2 252 192 0 103 chr5 166003699 166003777 -33626373 - MER51A-int LTR ERV1 -2438 2577 2508 1267 173 87 77 chr5 166003796 166004119 -33626031 - MER51A-int LTR ERV1 -4378 502 224 1227 162 48 70 chr5 166004184 166004456 -33625694 - MER51A-int LTR ERV1 -7550 266 1 3635 122 54 40 chr5 166004456 166005081 -33625069 - MER51A LTR ERV1 0 634 1 233 217 0 17 chr5 166005131 166005191 -33624959 + L1MD3 LINE L1 7807 7865 -130 266 70 211 18 chr5 166005334 166005391 -33624759 + L1MD3 LINE L1 7928 7995 0 344 239 45 11 chr5 166005627 166005715 -33624435 + MIR SINE MIR 56 146 -116 1728 85 4 8 chr5 166005812 166006059 -33624091 + AluSc SINE Alu 57 302 -7 399 223 10 83 chr5 166006212 166006405 -33623745 + (CCCCG)n Simple_repeat Simple_repeat 1 179 0 1383 124 3 178 chr5 166007411 166007765 -33622385 - L1MA6 LINE L1 -407 5893 5602 307 179 0 0 chr5 166007765 166007821 -33622329 + L1MA7 LINE L1 5911 5966 -325 930 131 0 0 chr5 166007821 166007958 -33622192 - FRAM SINE Alu -30 146 10 403 165 44 33 chr5 166007969 166008030 -33622120 + L1MA7 LINE L1 6047 6111 -180 1964 124 76 42 chr5 166008030 166008384 -33621766 - MER47A DNA MER2_type 0 366 1 403 165 44 33 chr5 166008384 166008413 -33621737 + L1MA7 LINE L1 6111 6138 -153 301 161 0 0 chr5 166008414 166008470 -33621680 + L1MA7 LINE L1 6235 6290 -1 1666 156 16 33 chr5 166008475 166008782 -33621368 + AluJb SINE Alu 1 302 -10 202 373 9 36 chr5 166008989 166009099 -33621051 + MIR SINE MIR 110 216 -46 189 379 15 0 chr5 166009517 166009583 -33620567 + MIR SINE MIR 31 97 -111 182 310 0 0 chr5 166009667 166009725 -33620425 - MIR SINE MIR -1 261 204 1467 165 41 68 chr5 166009740 166009773 -33620377 - L1MD3 LINE L1 -20 7975 7943 2004 125 3 22 chr5 166009773 166010086 -33620064 + AluSx SINE Alu 1 307 -5 1467 165 41 68 chr5 166010086 166010392 -33619758 - L1MD3 LINE L1 -52 7943 7645 447 231 71 95 chr5 166010400 166010613 -33619537 - MIR SINE MIR -52 210 2 550 294 221 13 chr5 166011056 166011532 -33618618 + L2 LINE L2 2741 3310 -3 394 293 68 34 chr5 166011714 166011919 -33618231 - MIR SINE MIR -14 248 37 194 272 19 107 chr5 166013024 166013127 -33617023 - MIR SINE MIR -92 170 77 2072 140 0 0 chr5 166013792 166014099 -33616051 + AluSx SINE Alu 1 307 -5 1708 178 0 0 chr5 166014493 166014780 -33615370 - AluJo SINE Alu -25 287 1 324 174 81 0 chr5 166014786 166014872 -33615278 - L1ME LINE L1 -298 5823 5731 1855 145 0 0 chr5 166014880 166015194 -33614956 - AluSx SINE Alu 0 314 1 979 113 0 0 chr5 166015196 166015329 -33614821 - AluSq/x SINE Alu -180 133 1 324 193 118 74 chr5 166015480 166015615 -33614535 - L1ME LINE L1 -911 5433 5293 295 313 14 35 chr5 166015799 166015943 -33614207 + MIR SINE MIR 112 252 -10 1854 116 81 0 chr5 166016541 166016825 -33613325 - AluSx SINE Alu -5 307 1 29 0 0 0 chr5 166016839 166016868 -33613282 + AT_rich Low_complexity Low_complexity 1 29 0 203 241 43 86 chr5 166016948 166017064 -33613086 - MIR SINE MIR -129 133 23 477 196 77 103 chr5 166018061 166018154 -33611996 - MIR SINE MIR -37 225 131 1993 143 0 7 chr5 166018154 166018454 -33611696 + AluSx SINE Alu 1 298 -14 477 196 77 103 chr5 166018454 166018554 -33611596 - MIR SINE MIR -131 131 37 262 191 0 0 chr5 166018897 166018944 -33611206 - MIR3 SINE MIR 0 208 162 216 331 173 29 chr5 166019289 166019428 -33610722 - L3 LINE CR1 -135 1442 1284 364 247 25 0 chr5 166019458 166019539 -33610611 + MER117 DNA MER1_type 32 114 -83 1467 124 4 21 chr5 166019653 166019886 -33610264 + AluJo SINE Alu 1 229 -83 236 256 26 39 chr5 166019915 166019993 -33610157 + MER117 DNA MER1_type 76 152 -45 182 250 21 0 chr5 166020036 166020084 -33610066 + MIR3 SINE MIR 151 199 -9 298 256 49 40 chr5 166020467 166020603 -33609547 + MIR3 SINE MIR 65 202 -6 2114 107 7 0 chr5 166021610 166021908 -33608242 - AluSc SINE Alu -9 300 1 426 252 60 73 chr5 166022032 166022250 -33607900 - Charlie8 DNA MER1_type -2152 265 51 1491 202 95 50 chr5 166022925 166023410 -33606740 + MER84 LTR ERV1 1 507 0 3839 225 105 22 chr5 166023617 166025064 -33605086 + L1MC4a LINE L1 4903 5372 -774 2972 204 98 10 chr5 166025067 166025248 -33604902 + L1MC4a LINE L1 6924 7088 -720 2086 103 3 13 chr5 166025248 166025549 -33604601 + AluSx SINE Alu 1 298 -14 2972 204 98 10 chr5 166025549 166026209 -33603941 + L1MC4a LINE L1 7088 7808 0 3459 57 28 9 chr5 166026263 166026699 -33603451 - MLT2A1 LTR ERVL 0 444 1 257 284 166 24 chr5 166026769 166026980 -33603170 - L2 LINE L2 -215 3057 2817 1806 78 55 0 chr5 166026984 166027240 -33602910 - AluY SINE Alu -1 310 41 2148 112 0 28 chr5 166027709 166028030 -33602120 - AluSq SINE Alu -1 312 1 850 139 0 22 chr5 166029245 166029382 -33600768 + AluJo SINE Alu 1 134 -178 2521 235 34 18 chr5 166029541 166030217 -33599933 - L1ME1 LINE L1 -5 6161 5475 344 319 113 19 chr5 166030255 166030415 -33599735 - MIR3 SINE MIR -15 193 19 286 242 142 50 chr5 166031345 166031465 -33598685 - MIR3 SINE MIR -28 180 50 193 356 34 0 chr5 166031502 166031561 -33598589 + L2 LINE L2 3239 3299 -14 32 67 0 0 chr5 166031868 166031928 -33598222 + AT_rich Low_complexity Low_complexity 1 60 0 479 207 0 16 chr5 166031929 166032050 -33598100 - L1MA4 LINE L1 -11 6289 6171 675 286 101 58 chr5 166032383 166032922 -33597228 + L2 LINE L2 2712 3312 -1 438 348 92 37 chr5 166033147 166033475 -33596675 - L3 LINE CR1 -81 1496 1151 2032 104 7 0 chr5 166033629 166033931 -33596219 + AluSx SINE Alu 1 304 0 345 238 38 0 chr5 166034061 166034141 -33596009 + MIR SINE MIR 48 130 -132 326 295 29 9 chr5 166034289 166034394 -33595756 - MIR SINE MIR -61 147 63 344 113 57 0 chr5 166034726 166034779 -33595371 + Tigger4(Zombi) DNA MER2_type 3 58 -2673 * 491 139 0 0 chr5 166034749 166034821 -33595329 + Tigger4(Zombi) DNA MER2_type 2660 2731 0 209 242 197 15 chr5 166034877 166034943 -33595207 - MER5A DNA MER1_type -24 165 88 2147 102 0 13 chr5 166034991 166035295 -33594855 + AluSx SINE Alu 1 300 -12 183 250 0 0 chr5 166035469 166035521 -33594629 + (CATA)n Simple_repeat Simple_repeat 4 55 0 548 73 0 0 chr5 166035563 166035645 -33594505 - AluSp SINE Alu 0 313 232 273 32 0 0 chr5 166035645 166035676 -33594474 - U2 snRNA snRNA -156 32 2 1767 113 4 0 chr5 166035676 166035923 -33594227 - AluSp SINE Alu -65 248 1 588 299 71 4 chr5 166035931 166036212 -33593938 - L1MC4a LINE L1 -1939 5869 5570 2195 108 0 6 chr5 166036326 166036640 -33593510 - AluSx SINE Alu 0 312 1 291 201 19 78 chr5 166036654 166036800 -33593350 - L1MC4a LINE L1 -749 5397 5262 181 211 268 14 chr5 166036843 166036914 -33593236 - MIR3 SINE MIR -52 156 68 433 284 10 0 chr5 166037147 166037249 -33592901 - MIR SINE MIR -1 261 159 805 222 116 10 chr5 166037253 166037460 -33592690 + MLT1I LTR MaLR 5 233 -176 482 254 22 15 chr5 166038317 166038330 -33591820 - MIR3 SINE MIR -44 164 153 2129 181 33 15 chr5 166038330 166038788 -33591362 - L1MB4 LINE L1 -1 6179 5714 482 254 22 15 chr5 166038788 166038908 -33591242 - MIR3 SINE MIR -55 153 30 1638 184 109 50 chr5 166039009 166039486 -33590664 + MLT1D LTR MaLR 1 505 0 692 171 8 26 chr5 166039638 166039755 -33590395 + MER2 DNA MER2_type 2 116 -229 1752 164 11 0 chr5 166039760 166040046 -33590104 - AluJo SINE Alu -23 289 1 510 308 6 23 chr5 166040287 166040459 -33589691 + L2 LINE L2 3139 3307 -6 297 135 0 0 chr5 166040476 166040528 -33589622 + (ATG)n Simple_repeat Simple_repeat 2 53 0 640 217 43 22 chr5 166040948 166041132 -33589018 - MER53 DNA DNA -1 188 1 185 321 199 46 chr5 166041166 166041428 -33588722 - L3 LINE CR1 -2 1575 1274 498 323 126 11 chr5 166041521 166041790 -33588360 - L3 LINE CR1 -295 1282 983 23 33 0 0 chr5 166042005 166042035 -33588115 + AT_rich Low_complexity Low_complexity 1 30 0 329 233 21 101 chr5 166042045 166042155 -33587995 - L1MC4 LINE L1 -1 8041 7951 197 65 32 0 chr5 166042155 166042186 -33587964 + (TA)n Simple_repeat Simple_repeat 1 32 0 329 233 21 101 chr5 166042186 166042264 -33587886 - L1MC4 LINE L1 -91 7951 7868 1855 116 4 4 chr5 166042266 166042534 -33587616 + AluSx SINE Alu 35 302 -10 335 213 13 27 chr5 166042680 166042755 -33587395 + MER2 DNA MER2_type 27 100 -245 729 168 0 0 chr5 166042852 166042965 -33587185 + AluJb SINE Alu 185 297 -15 309 225 38 25 chr5 166042967 166043047 -33587103 + L1MC5 LINE L1 7650 7730 -231 198 0 0 0 chr5 166043047 166043069 -33587081 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1243 231 161 22 chr5 166043091 166043624 -33586526 - L1MC4 LINE L1 -462 7580 6974 211 300 33 0 chr5 166043738 166043798 -33586352 + MER5A DNA MER1_type 57 118 -71 946 221 65 102 chr5 166043870 166044068 -33586082 - L1MC5 LINE L1 -48 7913 7709 2144 43 0 0 chr5 166044068 166044324 -33585826 + AluY SINE Alu 1 256 -55 216 0 0 0 chr5 166044333 166044357 -33585793 + (TAA)n Simple_repeat Simple_repeat 2 25 0 946 221 65 102 chr5 166044357 166044438 -33585712 - L1MC5 LINE L1 -260 7701 7618 1599 171 17 13 chr5 166044438 166044736 -33585414 - AluJb SINE Alu -13 299 1 946 221 65 102 chr5 166044736 166045111 -33585039 - L1MC5 LINE L1 -342 7619 7273 2132 102 0 0 chr5 166045309 166045615 -33584535 - AluSx SINE Alu 0 306 1 21 36 0 0 chr5 166045674 166045702 -33584448 + AT_rich Low_complexity Low_complexity 1 28 0 296 357 70 18 chr5 166045855 166046026 -33584124 + MIR SINE MIR 29 208 -54 281 238 40 30 chr5 166046053 166046154 -33583996 + L1MC/D LINE L1 5724 5825 -1983 2094 103 0 0 chr5 166046156 166046437 -33583713 + AluSq SINE Alu 1 281 -32 235 222 0 0 chr5 166047191 166047236 -33582914 + GA-rich Low_complexity Low_complexity 6 50 0 188 360 22 0 chr5 166047567 166047656 -33582494 + MIR SINE MIR 40 130 -78 2345 84 3 3 chr5 166048086 166048383 -33581767 - AluSp SINE Alu -16 297 1 651 228 152 9 chr5 166048621 166048832 -33581318 + MIR SINE MIR 9 249 -13 237 290 40 48 chr5 166049377 166049501 -33580649 - MIR SINE MIR -69 139 17 424 226 20 10 chr5 166049882 166049984 -33580166 - L3 LINE CR1 -72 1505 1403 895 191 22 78 chr5 166050119 166050350 -33579800 - MER20 DNA MER1_type 0 219 2 275 304 67 37 chr5 166050361 166050496 -33579654 - L3 LINE CR1 -454 1123 985 406 269 42 0 chr5 166050535 166050654 -33579496 + L2 LINE L2 3186 3309 -4 207 347 75 48 chr5 166050982 166051129 -33579021 - L2 LINE L2 0 3272 3122 2195 109 7 0 chr5 166051136 166051440 -33578710 + AluSx SINE Alu 1 306 -6 266 274 16 0 chr5 166051709 166051771 -33578379 - Charlie8 DNA MER1_type -1000 1417 1355 360 0 0 0 chr5 166052680 166052720 -33577430 + (TC)n Simple_repeat Simple_repeat 2 41 0 243 0 0 0 chr5 166052719 166052746 -33577404 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 257 0 30 0 chr5 166052827 166052860 -33577290 + (TA)n Simple_repeat Simple_repeat 2 35 0 215 268 53 78 chr5 166053110 166053298 -33576852 + MIR SINE MIR 25 202 -59 229 89 44 0 chr5 166053336 166053381 -33576769 + (CAT)n Simple_repeat Simple_repeat 1 47 0 2573 170 33 82 chr5 166054506 166055118 -33575032 + LTR8 LTR ERV1 1 582 -109 689 48 0 0 chr5 166055118 166055202 -33574948 + AluY SINE Alu 215 298 -13 918 109 0 0 chr5 166055203 166055322 -33574828 + LTR8 LTR ERV1 573 691 0 312 250 80 0 chr5 166055675 166055763 -33574387 - L1ME LINE L1 -545 5576 5482 2275 112 0 9 chr5 166055856 166056186 -33573964 + L1PA10 LINE L1 5823 6149 -19 186 71 0 0 chr5 166056186 166056214 -33573936 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 1330 261 33 24 chr5 166057475 166057935 -33572215 - L2 LINE L2 -2 3311 2848 405 206 0 0 chr5 166058010 166058083 -33572067 + FLAM_A SINE Alu 1 73 -69 2039 137 0 0 chr5 166058116 166058424 -33571726 + AluSq SINE Alu 1 308 0 1407 212 42 85 chr5 166058465 166058922 -33571228 - L2 LINE L2 -469 2845 2409 1230 171 10 0 chr5 166059188 166059393 -33570757 - AluJb SINE Alu -1 311 105 2338 88 0 13 chr5 166059396 166059701 -33570449 + AluSx SINE Alu 1 301 -11 7668 163 18 16 chr5 166060023 166060660 -33569490 - L1 LINE L1 -2451 5114 4479 2195 116 3 7 chr5 166060660 166060962 -33569188 - AluSx SINE Alu -11 301 1 7668 163 18 16 chr5 166060962 166062468 -33567682 - L1 LINE L1 -3086 4479 2966 4611 114 28 154 chr5 166062468 166063998 -33566152 + pTR5 LTR ERV1 6 714 0 16776 141 69 12 chr5 166063998 166066799 -33563351 - L1 LINE L1 -4589 2976 16 558 263 25 6 chr5 166066881 166067041 -33563109 + MIR SINE MIR 52 214 -48 299 337 85 62 chr5 166068189 166068392 -33561758 + L2 LINE L2 3008 3220 -52 675 233 131 102 chr5 166068392 166068803 -33561347 - MLT1H LTR MaLR -2 547 116 2312 112 7 0 chr5 166068803 166069107 -33561043 + AluSx SINE Alu 1 306 -6 675 233 131 102 chr5 166069107 166069223 -33560927 - MLT1H LTR MaLR -433 116 5 299 337 85 62 chr5 166069223 166069277 -33560873 + L2 LINE L2 3220 3271 -1 2385 92 3 0 chr5 166069915 166070220 -33559930 + AluSp SINE Alu 1 306 -7 2166 136 0 7 chr5 166070626 166070927 -33559223 + AluSx SINE Alu 1 299 -13 636 194 73 0 chr5 166071043 166071167 -33558983 + FLAM_A SINE Alu 1 133 0 293 173 87 58 chr5 166071241 166071345 -33558805 - MER34 LTR ERV1 -12 530 424 204 0 26 53 chr5 166071858 166071896 -33558254 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 418 168 66 0 chr5 166071916 166072083 -33558067 + (TA)n Simple_repeat Simple_repeat 1 178 0 196 228 120 43 chr5 166072473 166072565 -33557585 + MIR SINE MIR 82 180 -82 510 188 17 0 chr5 166073869 166073991 -33556159 + L1MB1 LINE L1 5740 5866 -317 380 266 114 59 chr5 166074087 166074324 -33555826 - Charlie8 DNA MER1_type -2141 276 27 679 250 71 46 chr5 166074358 166074598 -33555552 + MIR SINE MIR 16 261 -1 1537 159 0 66 chr5 166074599 166074928 -33555222 - AluJb SINE Alu 0 322 13 348 207 103 0 chr5 166075024 166075111 -33555039 + MIR SINE MIR 166 261 -1 2120 130 7 0 chr5 166075135 166075434 -33554716 - AluSx SINE Alu -11 301 1 225 253 72 48 chr5 166076296 166076379 -33553771 - L1 LINE L1 -2202 3944 3860 2075 124 3 0 chr5 166076411 166076745 -33553405 + AluSx SINE Alu 2 336 0 340 316 10 0 chr5 166076951 166077049 -33553101 - MIR SINE MIR -117 145 47 1074 167 36 10 chr5 166077598 166077763 -33552387 - AluSg/x SINE Alu 0 305 146 378 0 0 0 chr5 166077763 166077805 -33552345 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2238 99 3 0 chr5 166077805 166078088 -33552062 - AluSq SINE Alu -29 284 1 1074 167 36 10 chr5 166078088 166078137 -33552013 - AluSg/x SINE Alu -158 147 85 926 211 0 23 chr5 166078139 166078314 -33551836 - AluJo SINE Alu -59 253 83 200 281 234 0 chr5 166078583 166078711 -33551439 + MIR3 SINE MIR 30 187 -21 241 336 0 18 chr5 166078929 166078969 -33551181 + GA-rich Low_complexity Low_complexity 2 41 -71 2643 171 40 11 chr5 166078969 166079497 -33550653 + L1MB2 LINE L1 5629 6171 0 241 336 0 18 chr5 166079497 166079569 -33550581 + GA-rich Low_complexity Low_complexity 41 112 0 246 188 62 47 chr5 166079655 166079719 -33550431 + Charlie8 DNA MER1_type 26 90 -2327 1878 153 14 10 chr5 166080269 166080563 -33549587 - AluJb SINE Alu -9 303 9 377 305 43 37 chr5 166080674 166080834 -33549316 - MIR SINE MIR -63 145 15 183 80 0 0 chr5 166081202 166081227 -33548923 + (TC)n Simple_repeat Simple_repeat 1 25 0 317 268 57 8 chr5 166081283 166081406 -33548744 + MIR3 SINE MIR 30 158 -50 185 231 0 0 chr5 166081451 166081490 -33548660 + L2 LINE L2 3271 3309 -4 526 330 43 31 chr5 166081626 166081950 -33548200 + L1ME4a LINE L1 2 329 -6211 604 279 114 0 chr5 166082173 166082331 -33547819 - MER45A DNA AcHobo 0 178 3 1659 264 36 20 chr5 166082678 166083265 -33546885 + L1ME4a LINE L1 908 1503 -5040 1088 196 4 109 chr5 166083267 166083533 -33546617 - MER8 DNA MER2_type 0 239 2 1882 252 91 27 chr5 166083534 166084398 -33545752 + L1ME4a LINE L1 1503 2422 -4118 1820 189 8 110 chr5 166084388 166084759 -33545391 + L1ME4a LINE L1 5135 5440 -1100 * 1789 144 16 26 chr5 166084759 166085064 -33545086 - AluJo SINE Alu 0 312 11 1820 189 8 110 chr5 166085064 166085211 -33544939 + L1ME4a LINE L1 5440 5600 -940 513 243 0 9 chr5 166085222 166085329 -33544821 + FLAM_A SINE Alu 11 116 -26 2201 123 0 0 chr5 166085330 166085623 -33544527 - AluSx SINE Alu -19 293 1 918 184 75 0 chr5 166085661 166085862 -33544288 + L1ME4a LINE L1 5582 5797 -743 * 1179 247 30 7 chr5 166085839 166086143 -33544007 + L1ME1 LINE L1 6048 6358 -202 255 311 48 0 chr5 166086147 166086250 -33543900 + L1ME1 LINE L1 6436 6543 -17 1988 85 93 0 chr5 166087039 166087309 -33542841 + AluSg SINE Alu 1 295 -15 2168 103 0 3 chr5 166087864 166088185 -33541965 + AluSx SINE Alu 1 312 0 1847 125 96 0 chr5 166089205 166089477 -33540673 + AluSx SINE Alu 2 299 -13 189 0 0 0 chr5 166089917 166089938 -33540212 + (T)n Simple_repeat Simple_repeat 1 21 0 431 255 36 21 chr5 166090010 166090152 -33539998 - MER20B DNA MER1_type -19 200 54 616 253 140 11 chr5 166091044 166091309 -33538841 + L1ME4a LINE L1 5955 6253 -262 180 77 0 0 chr5 166091359 166091385 -33538765 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 554 292 101 9 chr5 166091390 166091609 -33538541 + MIR SINE MIR 3 241 -21 1836 174 13 7 chr5 166091853 166092158 -33537992 + AluJo SINE Alu 1 307 -5 196 245 191 21 chr5 166092375 166092469 -33537681 - MIR3 SINE MIR -29 179 70 2268 95 17 0 chr5 166092772 166093067 -33537083 - AluSp SINE Alu -13 300 1 296 323 61 0 chr5 166093258 166093357 -33536793 - L2 LINE L2 -32 3240 3136 233 333 10 20 chr5 166093468 166093567 -33536583 + GA-rich Low_complexity Low_complexity 1 98 0 803 144 6 22 chr5 166093608 166093788 -33536362 + GA-rich Low_complexity Low_complexity 1 177 0 262 336 120 29 chr5 166093943 166094294 -33535856 - L2 LINE L2 -1135 2179 1797 269 320 0 0 chr5 166094316 166094394 -33535756 + L2 LINE L2 3230 3307 -6 586 116 0 0 chr5 166094469 166094555 -33535595 - L1PA7 LINE L1 -8 6146 6061 751 294 61 29 chr5 166095247 166095790 -33534360 + L2 LINE L2 2275 2956 -358 258 341 23 0 chr5 166096002 166096090 -33534060 + L2 LINE L2 3126 3215 -57 182 254 113 0 chr5 166096141 166096212 -33533938 + L3 LINE CR1 1415 1493 -84 422 204 37 19 chr5 166097389 166097497 -33532653 - MIR3 SINE MIR -51 157 48 296 163 20 0 chr5 166097878 166097927 -33532223 - MER81 DNA DNA 0 114 65 626 237 114 22 chr5 166097929 166098157 -33531993 - MIR SINE MIR -2 260 12 271 258 54 0 chr5 166098212 166098305 -33531845 - MIR SINE MIR -117 145 48 229 346 0 19 chr5 166098756 166098863 -33531287 + MIR SINE MIR 20 124 -138 192 277 0 21 chr5 166099235 166099282 -33530868 + MIR SINE MIR 23 68 -140 194 347 116 0 chr5 166099391 166099486 -33530664 - MIR SINE MIR -123 139 34 200 196 0 22 chr5 166099972 166100018 -33530132 - MIR SINE MIR -148 60 16 211 316 120 30 chr5 166100469 166100602 -33529548 + MIR3 SINE MIR 49 193 -15 386 274 208 6 chr5 166101226 166101394 -33528756 - MIR SINE MIR -2 260 59 506 174 13 148 chr5 166102015 166102170 -33527980 + MER69A DNA AcHobo 44 177 0 295 165 6 32 chr5 166102192 166102271 -33527879 - MIR SINE MIR -67 141 62 181 0 33 33 chr5 166102305 166102335 -33527815 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 185 338 72 50 chr5 166102891 166103030 -33527120 + MIR3 SINE MIR 30 171 -37 188 333 30 10 chr5 166103290 166103389 -33526761 - MER5B DNA MER1_type -77 101 1 225 0 0 0 chr5 166103577 166103602 -33526548 + (CCA)n Simple_repeat Simple_repeat 2 26 0 620 182 0 15 chr5 166103743 166103875 -33526275 - MIR SINE MIR -95 167 38 1697 136 68 0 chr5 166104178 166104428 -33525722 - AluJb SINE Alu -24 288 22 240 261 160 8 chr5 166104472 166104591 -33525559 + MIR SINE MIR 107 243 -19 260 318 26 40 chr5 166104625 166104776 -33525374 - MIR3 SINE MIR -26 182 34 611 63 0 0 chr5 166104782 166104861 -33525289 + AluSp/q SINE Alu 219 297 -16 557 310 132 24 chr5 166105175 166105870 -33524280 + L2 LINE L2 2536 3310 -3 1478 196 44 72 chr5 166105927 166106356 -33523794 - MLT1D LTR MaLR 0 505 89 1309 139 239 0 chr5 166106352 166106603 -33523547 - MER21A LTR ERV1 -606 325 15 * 180 219 0 0 chr5 166106623 166106664 -33523486 + (TATATG)n Simple_repeat Simple_repeat 5 45 0 294 227 45 20 chr5 166106706 166106818 -33523332 - MIR SINE MIR -56 152 35 3857 137 26 32 chr5 166106868 166107486 -33522664 - L1MC1 LINE L1 -7 6326 5711 2268 115 0 0 chr5 166107486 166107790 -33522360 + AluSx SINE Alu 2 305 -7 3857 137 26 32 chr5 166107790 166107859 -33522291 - L1MC1 LINE L1 -622 5711 5643 313 206 29 0 chr5 166107982 166108050 -33522100 - MIR3 SINE MIR -24 184 115 406 285 38 31 chr5 166108169 166108415 -33521735 - MLT1K LTR MaLR -304 284 2 372 231 50 46 chr5 166108523 166108728 -33521422 - LTR38B LTR ERV1 0 592 400 794 256 80 23 chr5 166108873 166109174 -33520976 + L1MC4a LINE L1 5562 5879 -1929 22 0 0 0 chr5 166109468 166109490 -33520660 + AT_rich Low_complexity Low_complexity 1 22 0 1972 132 4 0 chr5 166109548 166109828 -33520322 + AluSx SINE Alu 28 308 -4 182 215 108 0 chr5 166110518 166110583 -33519567 - MIR SINE MIR -99 163 92 1212 215 5 0 chr5 166110996 166111219 -33518931 + MER58A DNA MER1_type 1 224 0 1295 245 94 10 chr5 166111328 166111720 -33518430 - MER57B LTR ERV1 0 434 10 1521 166 74 0 chr5 166111724 166111995 -33518155 - AluJo SINE Alu 0 312 22 247 221 19 125 chr5 166112090 166112154 -33517996 - MER5A DNA MER1_type -1 188 138 2931 9 0 3 chr5 166112154 166112470 -33517680 + AluYb8 SINE Alu 1 315 -3 247 221 19 125 chr5 166112470 166112509 -33517641 - MER5A DNA MER1_type -51 138 96 2043 221 25 65 chr5 166112945 166113556 -33516594 - L1MB8 LINE L1 -2 6176 5591 22 56 0 0 chr5 166113556 166113592 -33516558 + AT_rich Low_complexity Low_complexity 1 36 0 6471 147 25 34 chr5 166113614 166114727 -33515423 - Tigger2 DNA MER2_type 0 2718 1616 2972 210 55 7 chr5 166115046 166115795 -33514355 - L1M1 LINE L1 -4421 3144 2360 242 125 25 0 chr5 166115802 166115842 -33514308 - L1M1 LINE L1 -4151 2414 2374 2120 123 20 7 chr5 166115845 166116146 -33514004 - AluSx SINE Alu -7 305 1 7762 200 33 38 chr5 166116147 166117611 -33512539 - L1MB8 LINE L1 -1830 4316 2863 2216 115 7 0 chr5 166117611 166117906 -33512244 + AluSq SINE Alu 1 297 -16 7762 200 33 38 chr5 166117906 166118417 -33511733 - L1MB8 LINE L1 -3283 2863 2351 447 216 35 9 chr5 166119306 166119422 -33510728 + MIR SINE MIR 96 214 -48 312 333 85 62 chr5 166120568 166120771 -33509379 + L2 LINE L2 3008 3220 -52 675 233 131 102 chr5 166120771 166121182 -33508968 - MLT1H LTR MaLR -2 547 116 2324 111 0 3 chr5 166121182 166121489 -33508661 + AluSx SINE Alu 1 306 -6 675 233 131 102 chr5 166121489 166121605 -33508545 - MLT1H LTR MaLR -433 116 5 312 333 85 62 chr5 166121605 166121659 -33508491 + L2 LINE L2 3220 3271 -1 2379 88 3 3 chr5 166122297 166122605 -33507545 + AluSp SINE Alu 1 308 -5 2180 133 0 7 chr5 166123011 166123312 -33506838 + AluSx SINE Alu 1 299 -13 636 194 73 0 chr5 166123428 166123552 -33506598 + FLAM_A SINE Alu 1 133 0 293 173 87 58 chr5 166123626 166123730 -33506420 - MER34 LTR ERV1 -12 530 424 204 0 26 53 chr5 166124244 166124282 -33505868 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 51 0 0 0 chr5 166124285 166124336 -33505814 + AT_rich Low_complexity Low_complexity 1 51 0 191 59 0 29 chr5 166124340 166124374 -33505776 + (TAAAAA)n Simple_repeat Simple_repeat 5 37 0 307 163 51 0 chr5 166124374 166124472 -33505678 + (TA)n Simple_repeat Simple_repeat 1 103 0 196 228 120 43 chr5 166124859 166124951 -33505199 + MIR SINE MIR 82 180 -82 510 190 12 9 chr5 166126237 166126378 -33503772 + L1MB1 LINE L1 5724 5866 -317 380 266 114 59 chr5 166126474 166126711 -33503439 - Charlie8 DNA MER1_type -2141 276 27 635 258 71 46 chr5 166126745 166126985 -33503165 + MIR SINE MIR 16 261 -1 1563 167 0 60 chr5 166126986 166127317 -33502833 - AluJb SINE Alu 0 314 2 348 207 103 0 chr5 166127402 166127489 -33502661 + MIR SINE MIR 166 261 -1 2112 131 7 0 chr5 166127513 166127811 -33502339 - AluSx SINE Alu -12 300 1 225 253 72 48 chr5 166128673 166128756 -33501394 - L1 LINE L1 -2202 3944 3860 2075 124 3 0 chr5 166128788 166129126 -33501024 + AluSx SINE Alu 2 340 0 340 316 10 0 chr5 166129332 166129430 -33500720 - MIR SINE MIR -117 145 47 981 135 28 0 chr5 166129979 166130144 -33500006 - AluSg/x SINE Alu 0 305 137 381 22 0 0 chr5 166130144 166130190 -33499960 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2282 75 7 0 chr5 166130190 166130470 -33499680 - AluSp SINE Alu -30 283 2 800 181 93 5 chr5 166130521 166130714 -33499436 - MER33 DNA MER1_type -96 228 19 775 243 82 24 chr5 166130733 166131074 -33499076 + L1M4 LINE L1 3000 3360 -2786 691 119 0 0 chr5 166131081 166131182 -33498968 + AluSq/x SINE Alu 40 140 -172 4851 100 37 3 chr5 166132156 166132824 -33497326 + LTR8 LTR ERV1 1 691 0 742 54 0 0 chr5 166133810 166133902 -33496248 - AluY SINE Alu -218 93 2 2465 83 0 0 chr5 166134411 166134712 -33495438 - AluSx SINE Alu -11 301 1 289 267 23 0 chr5 166135005 166135091 -33495059 + MIR SINE MIR 31 118 -90 366 248 243 24 chr5 166135440 166135650 -33494500 - L3 LINE CR1 -11 1566 1311 321 141 0 0 chr5 166135805 166135876 -33494274 + (TG)n Simple_repeat Simple_repeat 1 71 0 225 65 0 0 chr5 166135875 166135906 -33494244 + (GA)n Simple_repeat Simple_repeat 1 31 0 * 351 208 212 75 chr5 166135993 166136205 -33493945 + MER102a DNA MER1_type 71 311 -19 208 180 16 33 chr5 166136539 166136600 -33493550 + (CAAA)n Simple_repeat Simple_repeat 3 62 0 2194 98 0 26 chr5 166136710 166137015 -33493135 - AluSg SINE Alu -13 297 1 1008 180 0 0 chr5 166138443 166138604 -33491546 - FRAM SINE Alu -16 160 1 2339 173 35 16 chr5 166138634 166139063 -33491087 + MER4E LTR ERV1 1 437 -342 2167 113 3 0 chr5 166139065 166139365 -33490785 + AluSp SINE Alu 9 309 -4 998 135 14 0 chr5 166139391 166139539 -33490611 + MER4E LTR ERV1 617 766 0 203 264 0 0 chr5 166139653 166139705 -33490445 + MIR SINE MIR 97 143 -65 9938 51 8 18 chr5 166140284 166142348 -33487802 - L1PA5 LINE L1 -4 6150 4102 18984 46 12 1 chr5 166142457 166145295 -33484855 - L1PA5 LINE L1 -311 5843 2979 269 238 12 0 chr5 166145418 166145498 -33484652 + CT-rich Low_complexity Low_complexity 4 84 0 296 323 61 0 chr5 166145646 166145745 -33484405 + L2 LINE L2 3136 3240 -32 2110 122 17 0 chr5 166145936 166146230 -33483920 + AluSp SINE Alu 1 299 -14 196 245 191 21 chr5 166146533 166146627 -33483523 + MIR3 SINE MIR 70 179 -29 1836 174 13 7 chr5 166146844 166147149 -33483001 - AluJo SINE Alu -5 307 1 554 292 101 9 chr5 166147393 166147612 -33482538 - MIR SINE MIR -21 241 3 616 253 140 11 chr5 166147693 166147958 -33482192 - L1ME4a LINE L1 -262 5859 5561 431 255 36 21 chr5 166148850 166148992 -33481158 + MER20B DNA MER1_type 54 200 -19 189 0 0 0 chr5 166149064 166149085 -33481065 + (A)n Simple_repeat Simple_repeat 1 21 0 1847 125 96 0 chr5 166149525 166149797 -33480353 - AluSx SINE Alu -13 299 2 2144 103 0 3 chr5 166150817 166151138 -33479012 - AluSx SINE Alu 0 312 1 1940 89 93 0 chr5 166151693 166151963 -33478187 - AluSg SINE Alu -15 295 1 234 320 48 0 chr5 166152752 166152855 -33477295 - L1ME1 LINE L1 -17 6149 6042 1189 247 30 7 chr5 166152859 166153163 -33476987 - L1ME1 LINE L1 -202 5964 5654 * 2481 177 19 129 chr5 166153140 166153379 -33476771 - L1ME4a LINE L1 -743 5403 5139 2152 130 0 0 chr5 166153379 166153672 -33476478 + AluSx SINE Alu 1 293 -19 552 242 0 65 chr5 166153673 166153797 -33476353 - FLAM_A SINE Alu -17 116 1 2481 177 19 129 chr5 166153797 166153928 -33476222 - L1ME4a LINE L1 -1007 5139 4995 1786 159 16 25 chr5 166153928 166154243 -33475907 + AluJo SINE Alu 1 312 0 2481 177 19 129 chr5 166154243 166154614 -33475536 - L1ME4a LINE L1 -1151 4995 4741 * 2973 250 88 30 chr5 166154604 166155469 -33474681 - L1MDb LINE L1 -4118 2422 1461 1129 196 4 109 chr5 166155469 166155735 -33474415 + MER8 DNA MER2_type 2 239 0 2973 250 88 30 chr5 166155735 166156324 -33473826 - L1MDb LINE L1 -5079 1461 908 335 348 72 22 chr5 166156374 166156555 -33473595 - L1MDb LINE L1 -5595 935 746 675 272 114 0 chr5 166156671 166156829 -33473321 + MER45A DNA AcHobo 3 178 0 546 330 43 31 chr5 166157052 166157376 -33472774 - L1MDb LINE L1 -6211 329 2 195 231 0 0 chr5 166157512 166157551 -33472599 - L2 LINE L2 -4 3309 3271 358 280 53 8 chr5 166157587 166157719 -33472431 - MIR3 SINE MIR -41 167 30 183 80 0 0 chr5 166157775 166157800 -33472350 + (GA)n Simple_repeat Simple_repeat 1 25 0 420 305 43 37 chr5 166158168 166158328 -33471822 + MIR SINE MIR 15 173 -63 1896 151 13 10 chr5 166158439 166158737 -33471413 + AluJb SINE Alu 9 307 -5 245 188 62 47 chr5 166159287 166159351 -33470799 - Charlie8 DNA MER1_type -2327 90 26 241 336 0 18 chr5 166159437 166159509 -33470641 + CT-rich Low_complexity Low_complexity 2 73 -39 2786 169 40 11 chr5 166159509 166160037 -33470113 - L1MB2 LINE L1 0 6171 5629 241 336 0 18 chr5 166160037 166160077 -33470073 + CT-rich Low_complexity Low_complexity 73 112 0 235 281 234 0 chr5 166160295 166160423 -33469727 - MIR3 SINE MIR -21 187 30 1058 194 0 50 chr5 166160694 166160916 -33469234 + AluJo SINE Alu 85 295 -17 2590 53 0 9 chr5 166160918 166161236 -33468914 + AluYb8 SINE Alu 1 315 -3 2079 221 25 65 chr5 166161712 166162323 -33467827 - L1MB8 LINE L1 -2 6176 5591 22 56 0 0 chr5 166162323 166162359 -33467791 + AT_rich Low_complexity Low_complexity 1 36 0 6489 146 25 35 chr5 166162381 166163495 -33466655 - Tigger2 DNA MER2_type 0 2718 1616 4026 181 40 36 chr5 166163814 166164613 -33465537 - L1M1 LINE L1 -4151 1177 1105 2188 137 0 0 chr5 166164613 166164920 -33465230 - AluSx SINE Alu -5 307 1 4026 181 40 36 chr5 166164920 166165563 -33464587 - L1M1 LINE L1 -4223 1105 466 1403 178 13 0 chr5 166165569 166165800 -33464350 - L1M1 LINE L1 -5088 240 7 4969 133 23 11 chr5 166165816 166166597 -33463553 - Tigger2 DNA MER2_type -1928 790 1 871 202 7 0 chr5 166166597 166166769 -33463381 - L1MB8 LINE L1 -577 5607 5427 336 306 97 0 chr5 166166775 166166899 -33463251 - MIR3 SINE MIR -9 199 64 916 293 122 12 chr5 166166905 166167331 -33462819 - MLT1K LTR MaLR -2 474 2 272 253 25 13 chr5 166167334 166167413 -33462737 - MLT1K LTR MaLR -489 99 20 214 356 11 33 chr5 166167433 166167523 -33462627 - MIR3 SINE MIR -111 97 10 557 224 9 9 chr5 166167764 166167880 -33462270 - MIR3 SINE MIR -29 179 64 530 342 34 4 chr5 166167880 166168117 -33462033 + MIR SINE MIR 12 255 -7 31 0 0 0 chr5 166168165 166168196 -33461954 + AT_rich Low_complexity Low_complexity 1 31 0 310 308 42 8 chr5 166168465 166168585 -33461565 - MIR3 SINE MIR -80 128 5 4332 64 10 63 chr5 166169048 166170145 -33460005 - MER11A LTR ERVK 0 1266 1 1542 180 0 19 chr5 166171820 166172087 -33458063 - AluJo SINE Alu -49 263 2 2145 126 0 19 chr5 166172097 166172407 -33457743 - AluSx SINE Alu -8 304 1 430 323 18 0 chr5 166172762 166172950 -33457200 + L1ME LINE L1 5587 5783 -338 2147 116 20 0 chr5 166173017 166173319 -33456831 + AluSq SINE Alu 1 308 -5 734 182 54 14 chr5 166173341 166173489 -33456661 - MER20 DNA MER1_type -65 154 1 227 204 102 23 chr5 166173614 166173702 -33456448 - L1ME4a LINE L1 -27 6094 6000 868 238 35 55 chr5 166174635 166174753 -33455397 + L1MCa LINE L1 970 1089 -5337 1641 188 3 17 chr5 166174753 166175046 -33455104 - AluJo SINE Alu -15 297 9 868 238 35 55 chr5 166175046 166175271 -33454879 + L1MCa LINE L1 1089 1306 -5120 570 188 0 40 chr5 166175271 166175372 -33454778 + FLAM_C SINE Alu 36 132 -11 972 259 96 56 chr5 166175381 166175458 -33454692 + L1MCa LINE L1 1494 1566 -5041 735 211 16 0 chr5 166175458 166175581 -33454569 + FLAM_A SINE Alu 1 125 -8 972 259 96 56 chr5 166175581 166176054 -33454096 + L1MCa LINE L1 1566 2066 -4541 851 213 27 0 chr5 166176055 166176205 -33453945 - FRAM SINE Alu -22 154 1 217 184 0 0 chr5 166176282 166176297 -33453853 + (TG)n Simple_repeat Simple_repeat 2 16 -23 2527 101 33 97 chr5 166176297 166176722 -33453428 + MER48 LTR ERV1 1 398 0 217 184 0 0 chr5 166176722 166176744 -33453406 + (TG)n Simple_repeat Simple_repeat 15 39 0 6914 165 72 21 chr5 166176744 166178611 -33451539 - L1P5 LINE L1 -364 5792 3842 4330 212 23 25 chr5 166178626 166178945 -33451205 - L1 LINE L1 -2897 3249 2931 2362 99 0 0 chr5 166178945 166179239 -33450911 - AluSq SINE Alu -19 294 1 4330 212 23 25 chr5 166179239 166179652 -33450498 - L1 LINE L1 -3215 2931 2518 2660 23 3 3 chr5 166179652 166179956 -33450194 - AluY SINE Alu -7 304 1 4330 212 23 25 chr5 166179956 166180318 -33449832 - L1 LINE L1 -3628 2518 2157 2326 91 7 0 chr5 166181632 166181939 -33448211 - AluSp SINE Alu -3 310 2 821 181 93 5 chr5 166181990 166182183 -33447967 - MER33 DNA MER1_type -96 228 19 809 243 82 24 chr5 166182202 166182543 -33447607 + L1MCa LINE L1 3280 3640 -2786 724 119 0 0 chr5 166182550 166182651 -33447499 + AluSq/x SINE Alu 40 140 -172 5089 100 37 3 chr5 166183625 166184293 -33445857 + LTR8 LTR ERV1 1 691 0 784 54 0 0 chr5 166185279 166185371 -33444779 - AluY SINE Alu -218 93 2 2443 83 0 0 chr5 166185880 166186181 -33443969 - AluSx SINE Alu -11 301 1 313 211 16 146 chr5 166186474 166186597 -33443553 + MIR SINE MIR 31 137 -71 430 251 264 21 chr5 166186909 166187144 -33443006 - L3 LINE CR1 -11 1566 1275 339 137 0 0 chr5 166187274 166187347 -33442803 + (TG)n Simple_repeat Simple_repeat 1 73 0 225 65 0 0 chr5 166187346 166187377 -33442773 + (GA)n Simple_repeat Simple_repeat 1 31 0 * 352 208 212 75 chr5 166187464 166187676 -33442474 + MER102a DNA MER1_type 71 311 -19 225 200 0 17 chr5 166188009 166188069 -33442081 + A-rich Low_complexity Low_complexity 1 59 0 2168 95 0 29 chr5 166188183 166188489 -33441661 - AluSg SINE Alu -13 297 1 183 128 51 51 chr5 166189824 166189863 -33440287 + L3b LINE CR1 1272 1310 -273 1000 180 0 0 chr5 166189917 166190078 -33440072 - FRAM SINE Alu -16 160 1 2350 173 35 16 chr5 166190108 166190537 -33439613 + MER4E LTR ERV1 1 437 -342 2156 113 3 0 chr5 166190539 166190839 -33439311 + AluSp SINE Alu 9 309 -4 1016 128 14 0 chr5 166190865 166191013 -33439137 + MER4E LTR ERV1 617 766 0 246 290 82 0 chr5 166191077 166191179 -33438971 + MIR SINE MIR 32 148 -65 244 334 11 13 chr5 166191537 166191675 -33438475 + L2 LINE L2 2900 3034 -238 42050 60 4 5 chr5 166191724 166197888 -33432262 - L1PA5 LINE L1 -2 6152 2 2011 159 0 0 chr5 166198131 166198439 -33431711 - AluSx SINE Alu -2 310 3 1661 117 43 0 chr5 166198501 166198732 -33431418 - AluSg SINE Alu -69 241 1 25 51 0 0 chr5 166198929 166198968 -33431182 + AT_rich Low_complexity Low_complexity 1 39 0 660 283 80 17 chr5 166199042 166199279 -33430871 - MIR SINE MIR -1 261 10 1948 104 82 0 chr5 166199840 166200120 -33430030 + AluSq SINE Alu 5 307 -6 1956 157 3 3 chr5 166200166 166200459 -33429691 + AluJb SINE Alu 1 293 -19 598 151 79 58 chr5 166201225 166201364 -33428786 - L1MC4 LINE L1 -2 8040 7899 247 164 15 15 chr5 166201372 166201416 -33428734 + (TA)n Simple_repeat Simple_repeat 1 47 -20 2284 113 0 0 chr5 166201416 166201709 -33428441 - AluSx SINE Alu -10 302 10 247 164 15 15 chr5 166201709 166201731 -33428419 + (TA)n Simple_repeat Simple_repeat 46 67 0 331 228 79 69 chr5 166202014 166202115 -33428035 - MIR3 SINE MIR -26 182 81 393 259 98 0 chr5 166202184 166202327 -33427823 - MIR SINE MIR 0 262 106 6223 111 20 48 chr5 166202331 166203002 -33427148 - L1PA16 LINE L1 -2 7602 6936 216 0 0 0 chr5 166203002 166203026 -33427124 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6223 111 20 48 chr5 166203026 166203354 -33426796 - L1PA16 LINE L1 -668 6936 6600 13253 212 31 15 chr5 166203665 166205707 -33424443 - L1PA16 LINE L1 -1214 6370 4262 2434 149 68 22 chr5 166205707 166206116 -33424034 + MSTA LTR MaLR 1 428 0 13253 212 31 15 chr5 166206116 166207771 -33422379 - L1PA16 LINE L1 -3322 4262 2635 980 169 17 12 chr5 166207779 166207951 -33422199 - AluJb SINE Alu 0 312 140 866 257 74 67 chr5 166207957 166208463 -33421687 - L1PA16 LINE L1 -4939 2645 2189 265 264 9 66 chr5 166208732 166208838 -33421312 - MIR SINE MIR -147 115 16 6535 71 7 35 chr5 166209234 166210084 -33420066 - LTR12 LTR ERV1 0 826 1 292 213 38 25 chr5 166210257 166210337 -33419813 - MIR3 SINE MIR -29 179 99 469 269 69 0 chr5 166210380 166210510 -33419640 - MIR SINE MIR -10 252 114 2378 95 0 22 chr5 166210610 166210927 -33419223 - AluSg SINE Alu 0 310 1 1703 183 6 16 chr5 166211428 166211740 -33418410 - AluJb SINE Alu -1 311 3 621 247 153 0 chr5 166212006 166212156 -33417994 + MER5A DNA MER1_type 9 181 -8 305 343 24 42 chr5 166212032 166212198 -33417952 - MER5A DNA MER1_type -23 166 4 * 285 295 45 64 chr5 166212219 166212375 -33417775 - MER5B DNA MER1_type -14 164 12 768 273 78 26 chr5 166212382 166212613 -33417537 - MIR SINE MIR 0 262 20 419 185 109 0 chr5 166212616 166212708 -33417442 + L2 LINE L2 3208 3309 -4 1041 189 147 0 chr5 166213237 166213427 -33416723 - MER20 DNA MER1_type -1 218 1 252 309 0 0 chr5 166213544 166213599 -33416551 - MIR SINE MIR -159 103 49 320 259 123 57 chr5 166213824 166214036 -33416114 + MLT1K LTR MaLR 188 413 -175 225 0 0 0 chr5 166214243 166214268 -33415882 + (CAAAC)n Simple_repeat Simple_repeat 2 26 0 569 268 58 31 chr5 166215384 166215608 -33414542 + L2 LINE L2 3084 3313 0 216 163 0 0 chr5 166216288 166216331 -33413819 + (TA)n Simple_repeat Simple_repeat 2 44 0 337 345 88 58 chr5 166216516 166216907 -33413243 - L2 LINE L2 -97 3175 2776 423 336 148 27 chr5 166217618 166218197 -33411953 + L2 LINE L2 2644 3272 0 2217 102 3 29 chr5 166218262 166218575 -33411575 + AluSx SINE Alu 1 305 -7 2300 126 15 51 chr5 166219190 166219579 -33410571 + THE1C LTR MaLR 1 375 0 10020 115 9 76 chr5 166219579 166221272 -33408878 + THE1C-int LTR MaLR 1 1580 0 2340 139 5 41 chr5 166221272 166221661 -33408489 + THE1C LTR MaLR 1 375 0 245 315 21 12 chr5 166221692 166221803 -33408347 + MIR3 SINE MIR 45 156 -52 1207 136 22 0 chr5 166222005 166222189 -33407961 - MER5A DNA MER1_type 0 189 2 260 314 59 17 chr5 166222619 166222737 -33407413 - L2 LINE L2 -4 3309 3187 284 339 26 9 chr5 166222779 166222894 -33407256 - MIR3 SINE MIR -88 120 4 28 0 0 0 chr5 166223225 166223253 -33406897 + AT_rich Low_complexity Low_complexity 1 28 0 1811 152 13 10 chr5 166223297 166223607 -33406543 - AluJb SINE Alu 0 312 2 2231 109 0 13 chr5 166223643 166223956 -33406194 - AluSc SINE Alu 0 309 1 341 269 131 0 chr5 166224370 166224500 -33405650 + L1MC1 LINE L1 5186 5332 -814 1514 171 13 54 chr5 166224500 166224798 -33405352 + AluJo SINE Alu 1 286 -26 1394 124 0 5 chr5 166224811 166225005 -33405145 + AluSg/x SINE Alu 85 277 -33 6679 127 19 6 chr5 166225022 166226041 -33404109 + L1MC1 LINE L1 5302 6333 0 23 0 0 0 chr5 166226746 166226769 -33403381 + AT_rich Low_complexity Low_complexity 1 23 0 325 225 98 139 chr5 166226828 166226904 -33403246 - MIR SINE MIR -73 189 111 784 200 17 23 chr5 166226904 166227079 -33403071 + L1MB8 LINE L1 6005 6178 0 325 225 98 139 chr5 166227079 166227175 -33402975 - MIR SINE MIR -151 111 24 26 0 0 0 chr5 166227320 166227346 -33402804 + GC_rich Low_complexity Low_complexity 1 26 0 438 127 0 0 chr5 166227608 166227679 -33402471 + (TGGA)n Simple_repeat Simple_repeat 4 74 0 24 53 0 0 chr5 166227884 166227922 -33402228 + AT_rich Low_complexity Low_complexity 1 38 0 369 0 0 0 chr5 166228031 166228072 -33402078 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 712 257 49 90 chr5 166228152 166228221 -33401929 - L1MC4a LINE L1 -1961 5847 5777 4970 141 32 51 chr5 166228221 166229208 -33400942 - LTR5 LTR ERVK 0 969 1 712 257 49 90 chr5 166229208 166229527 -33400623 - L1MC4a LINE L1 -2031 5777 5475 238 290 70 10 chr5 166229590 166229690 -33400460 + L3 LINE CR1 1093 1198 -379 202 200 25 0 chr5 166229845 166229885 -33400265 + L3 LINE CR1 1431 1471 -106 2319 99 0 0 chr5 166230707 166230999 -33399151 - AluSx SINE Alu -20 292 1 29 0 0 0 chr5 166231245 166231274 -33398876 + AT_rich Low_complexity Low_complexity 1 29 0 3407 35 23 2 chr5 166231274 166231670 -33398480 - L1PA4 LINE L1 -1 6154 5751 300 252 112 48 chr5 166231692 166231802 -33398348 - MIR SINE MIR -88 120 2 282 335 70 38 chr5 166231895 166232053 -33398097 - L3b LINE CR1 -64 1519 1357 335 252 117 9 chr5 166232084 166232195 -33397955 - L2 LINE L2 0 3272 3150 1232 119 6 0 chr5 166232230 166232398 -33397752 - AluSg/x SINE Alu -10 300 132 1987 95 20 24 chr5 166232398 166232694 -33397456 - AluSg SINE Alu -15 295 1 235 328 90 16 chr5 166232701 166232823 -33397327 - MIR SINE MIR -5 257 127 222 329 40 84 chr5 166232887 166233112 -33397038 + L2 LINE L2 3004 3218 -54 2453 136 34 6 chr5 166233554 166233908 -33396242 + THE1B LTR MaLR 1 364 0 422 245 88 44 chr5 166234438 166234597 -33395553 + L2 LINE L2 332 497 -2817 1722 239 87 43 chr5 166234610 166235149 -33395001 + MLT1E3 LTR MaLR 62 624 0 315 0 0 0 chr5 166235290 166235325 -33394825 + (TA)n Simple_repeat Simple_repeat 1 35 0 1274 109 6 0 chr5 166235340 166235515 -33394635 - AluSp SINE Alu 0 313 138 6679 127 19 6 chr5 166235648 166236667 -33393483 - L1MC1 LINE L1 0 6333 5302 1394 124 0 5 chr5 166236684 166236878 -33393272 - AluSg/x SINE Alu -33 277 85 1514 171 13 54 chr5 166236891 166237189 -33392961 - AluJo SINE Alu -26 286 1 341 269 131 0 chr5 166237189 166237319 -33392831 - L1MC1 LINE L1 -814 5332 5186 2196 108 0 16 chr5 166237733 166238047 -33392103 + AluSc SINE Alu 1 309 0 1828 163 16 3 chr5 166238083 166238390 -33391760 + AluJb SINE Alu 2 312 0 443 62 0 16 chr5 166238390 166238454 -33391696 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 2418 71 7 10 chr5 166238455 166238763 -33391387 + AluY SINE Alu 5 311 0 28 0 0 0 chr5 166238807 166238835 -33391315 + AT_rich Low_complexity Low_complexity 1 28 0 284 339 26 9 chr5 166239167 166239282 -33390868 + MIR3 SINE MIR 4 120 -88 260 314 59 17 chr5 166239324 166239442 -33390708 + L2 LINE L2 3187 3309 -4 1218 141 16 0 chr5 166239871 166240056 -33390094 + MER5A DNA MER1_type 2 189 0 245 315 21 12 chr5 166240259 166240370 -33389780 - MIR3 SINE MIR -52 156 45 2340 139 5 41 chr5 166240401 166240790 -33389360 - THE1C LTR MaLR 0 375 1 842 120 9 34 chr5 166240795 166240960 -33389190 - THE1C-int LTR MaLR -7 1573 1432 23 55 0 18 chr5 166241085 166241103 -33389047 + AT_rich Low_complexity Low_complexity 1 18 -36 2271 100 3 22 chr5 166241103 166241422 -33388728 - AluSq SINE Alu 0 313 1 23 55 0 18 chr5 166241422 166241458 -33388692 + AT_rich Low_complexity Low_complexity 18 54 0 380 293 83 76 chr5 166241839 166242432 -33387718 + L1MEd LINE L1 772 1368 -5004 1595 185 40 28 chr5 166242458 166242782 -33387368 + MLT1A1 LTR MaLR 38 365 0 527 236 174 70 chr5 166242793 166243305 -33386845 + L1MEd LINE L1 1266 1979 -4584 219 287 32 0 chr5 166243542 166243636 -33386514 + A-rich Low_complexity Low_complexity 2 98 0 259 275 53 8 chr5 166243699 166243830 -33386320 + L1MEd LINE L1 2446 2582 -3800 198 308 0 15 chr5 166243854 166243919 -33386231 - MIR SINE MIR -7 255 192 1022 201 133 32 chr5 166243947 166244196 -33385954 - L1ME2 LINE L1 -10 6154 5881 301 294 12 0 chr5 166244424 166244509 -33385641 + MIR3 SINE MIR 84 169 -39 231 312 199 7 chr5 166244623 166244764 -33385386 - MIR3 SINE MIR -21 187 20 2323 161 145 7 chr5 166245561 166246003 -33384147 - MLT1D LTR MaLR -2 503 1 448 268 32 8 chr5 166246003 166246126 -33384024 - MER94 DNA DNA -8 126 1 1819 136 92 50 chr5 166246796 166247156 -33382994 - THE1C LTR MaLR 0 375 1 2124 128 7 3 chr5 166247214 166247520 -33382630 + AluSc SINE Alu 1 307 -2 304 179 48 36 chr5 166248009 166248093 -33382057 - LTR16A1 LTR ERVL -370 87 3 207 254 179 0 chr5 166248095 166248162 -33381988 + MIR SINE MIR 160 238 -24 195 282 57 81 chr5 166248536 166248660 -33381490 - MIR SINE MIR -70 192 72 959 167 61 11 chr5 166248785 166248965 -33381185 - MER5A DNA MER1_type 0 189 1 830 190 70 0 chr5 166248999 166249157 -33380993 + FRAM SINE Alu 6 174 -2 676 218 28 0 chr5 166249608 166249750 -33380400 - L1MA10 LINE L1 -14 6320 6175 307 188 123 113 chr5 166249752 166249956 -33380194 - L1ME1 LINE L1 -153 6030 5826 12990 193 24 37 chr5 166249978 166250219 -33379931 - L1MA9 LINE L1 0 6291 6048 1766 123 103 0 chr5 166250219 166250521 -33379629 - L1MA5A LINE L1 -5 6292 5960 12990 193 24 37 chr5 166250521 166252330 -33377820 - L1MA9 LINE L1 -243 6048 4218 2092 119 20 7 chr5 166252330 166252623 -33377527 - AluSx SINE Alu -15 297 1 12990 193 24 37 chr5 166252623 166254088 -33376062 - L1MA9 LINE L1 -2073 4218 2867 2216 115 7 0 chr5 166254088 166254383 -33375767 + AluSq SINE Alu 1 297 -16 12990 193 24 37 chr5 166254383 166254894 -33375256 - L1MA9 LINE L1 -3424 2867 2351 354 303 15 76 chr5 166255978 166256176 -33373974 - MIR3 SINE MIR -20 188 3 206 234 241 15 chr5 166256582 166256719 -33373431 + MIR3 SINE MIR 20 187 -21 797 147 0 37 chr5 166256756 166256892 -33373258 - FLAM_C SINE Alu -2 131 1 514 319 81 20 chr5 166257429 166257724 -33372426 + L3 LINE CR1 1263 1575 -2 878 175 0 0 chr5 166259051 166259194 -33370956 - FLAM_C SINE Alu 0 143 1 472 279 42 6 chr5 166259442 166259607 -33370543 - MIR SINE MIR -15 247 77 222 370 26 31 chr5 166259729 166259921 -33370229 + MIR3 SINE MIR 17 207 -1 2061 131 0 3 chr5 166260443 166260741 -33369409 + AluSx SINE Alu 16 312 0 2164 112 0 7 chr5 166260761 166261046 -33369104 + AluSq SINE Alu 1 283 -30 265 24 48 0 chr5 166261050 166261092 -33369058 + (TAAAA)n Simple_repeat Simple_repeat 3 46 0 754 236 81 20 chr5 166261143 166261366 -33368784 - MER33 DNA MER1_type -268 56 1 189 309 0 60 chr5 166261422 166261506 -33368644 - MIR3 SINE MIR -6 202 124 49 18 0 0 chr5 166261685 166261741 -33368409 + AT_rich Low_complexity Low_complexity 1 56 0 216 0 0 0 chr5 166261925 166261949 -33368201 + (T)n Simple_repeat Simple_repeat 1 24 0 882 294 93 21 chr5 166262310 166262552 -33367598 - L3 LINE CR1 -59 1518 1295 1798 10 0 5 chr5 166262552 166262747 -33367403 - AluY SINE Alu -10 301 108 882 294 93 21 chr5 166262747 166262922 -33367228 - L3 LINE CR1 -282 1295 1071 307 271 0 123 chr5 166263089 166263244 -33366906 - L3 LINE CR1 -581 996 861 1272 223 62 43 chr5 166263483 166263948 -33366202 - LTR56 LTR ERV1 0 437 1 865 135 0 23 chr5 166264017 166264150 -33366000 - FLAM_C SINE Alu -2 131 2 254 284 135 7 chr5 166265050 166265198 -33364952 + MIR3 SINE MIR 36 202 -6 2535 70 3 0 chr5 166265679 166265991 -33364159 - AluSp SINE Alu 0 313 1 269 157 26 52 chr5 166266090 166266205 -33363945 + (TA)n Simple_repeat Simple_repeat 1 112 0 1685 153 34 37 chr5 166268848 166269143 -33361007 - AluJo SINE Alu -18 294 1 3762 184 71 32 chr5 166269372 166270219 -33359931 + Charlie1a DNA MER1_type 11 890 -565 2438 80 7 3 chr5 166270219 166270519 -33359631 - AluSc SINE Alu -8 301 1 26 0 0 0 chr5 166270636 166270662 -33359488 + AT_rich Low_complexity Low_complexity 1 26 0 2174 126 3 0 chr5 166270737 166271031 -33359119 - AluSx SINE Alu -17 295 1 565 214 220 0 chr5 166271180 166271353 -33358797 + MIR SINE MIR 5 215 -47 523 226 65 0 chr5 166271642 166271766 -33358384 - L2 LINE L2 0 3313 3182 374 322 22 17 chr5 166273115 166273295 -33356855 + MIR3 SINE MIR 17 197 -11 233 197 15 0 chr5 166274001 166274067 -33356083 + CT-rich Low_complexity Low_complexity 3 69 0 560 264 104 13 chr5 166274198 166274429 -33355721 - L1MC4a LINE L1 -1841 5967 5716 789 156 0 15 chr5 166274844 166274979 -33355171 + L1PB4 LINE L1 6022 6154 -2 1945 122 24 10 chr5 166275833 166276121 -33354029 + AluSx SINE Alu 1 292 -20 522 120 66 6 chr5 166276122 166276289 -33353861 + (TA)n Simple_repeat Simple_repeat 1 177 0 1173 120 27 11 chr5 166276383 166276567 -33353583 - MER20 DNA MER1_type -17 202 16 22 0 0 0 chr5 166276674 166276696 -33353454 + AT_rich Low_complexity Low_complexity 1 22 0 356 265 70 50 chr5 166277341 166277639 -33352511 - L1ME LINE L1 -345 5776 5473 24 67 0 0 chr5 166277661 166277706 -33352444 + AT_rich Low_complexity Low_complexity 1 45 0 336 250 0 11 chr5 166278354 166278446 -33351704 + MER117 DNA MER1_type 73 163 -34 962 161 124 5 chr5 166278962 166279148 -33351002 - MER6B DNA MER2_type -2 208 1 24 0 0 0 chr5 166279573 166279597 -33350553 + AT_rich Low_complexity Low_complexity 1 24 0 3351 70 36 16 chr5 166279932 166280376 -33349774 - MLT2A2 LTR ERVL 0 453 1 28 0 0 0 chr5 166280657 166280685 -33349465 + AT_rich Low_complexity Low_complexity 1 28 0 1885 132 0 24 chr5 166280760 166281049 -33349101 + AluSx SINE Alu 1 282 -30 468 0 0 0 chr5 166281049 166281101 -33349049 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 2441 98 0 0 chr5 166281759 166282065 -33348085 + AluSx SINE Alu 1 306 -6 639 257 91 25 chr5 166282226 166282467 -33347683 + MIR SINE MIR 6 262 0 222 128 0 0 chr5 166285299 166285338 -33344812 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 714 208 0 0 chr5 166285340 166285460 -33344690 - 5S rRNA rRNA -1 120 1 535 165 9 28 chr5 166285501 166285610 -33344540 - L1MA5 LINE L1 -6 6294 6188 726 292 65 15 chr5 166286905 166287165 -33342985 - L1MC/D LINE L1 -2017 5791 5519 307 289 56 0 chr5 166290184 166290274 -33339876 + MIR3 SINE MIR 109 203 -5 1680 85 0 18 chr5 166290726 166290949 -33339201 + AluY SINE Alu 93 311 0 371 254 67 30 chr5 166292429 166292563 -33337587 - MIR3 SINE MIR -14 194 56 255 290 160 0 chr5 166292636 166292736 -33337414 - MIR SINE MIR -118 144 29 753 191 105 0 chr5 166293685 166293847 -33336303 + MER3 DNA MER1_type 31 209 0 2248 116 151 5 chr5 166293895 166294267 -33335883 - MSTB LTR MaLR 0 426 1 623 289 29 0 chr5 166294803 166295007 -33335143 - MIR SINE MIR -25 237 28 363 290 159 0 chr5 166295631 166295776 -33334374 + MIR3 SINE MIR 30 197 -11 225 178 0 0 chr5 166297660 166297705 -33332445 + (TG)n Simple_repeat Simple_repeat 2 46 0 1561 163 121 10 chr5 166300554 166300866 -33329284 + MLT2C1 LTR ERVL 3 366 -48 265 200 0 0 chr5 166300907 166300957 -33329193 + MLT2C1 LTR ERVL 464 513 -7 1472 204 83 74 chr5 166301056 166301463 -33328687 - MER21B LTR ERV1 0 863 453 235 351 21 0 chr5 166301552 166301646 -33328504 - MIR SINE MIR -147 115 20 2051 180 36 30 chr5 166302186 166302625 -33327525 - L1ME1 LINE L1 -10 6156 5715 907 171 17 11 chr5 166302625 166302806 -33327344 + LTR23 LTR ERV1 223 404 -33 1912 184 90 0 chr5 166302817 166303182 -33326968 - L1ME1 LINE L1 -447 5719 5322 3372 208 41 34 chr5 166303203 166303938 -33326212 - L1MD2 LINE L1 0 6359 5616 1963 107 79 59 chr5 166303938 166304294 -33325856 + THE1B LTR MaLR 1 363 -1 3372 208 41 34 chr5 166304294 166304434 -33325716 - L1MD2 LINE L1 -743 5616 5478 1639 124 4 0 chr5 166304440 166304682 -33325468 - AluSx SINE Alu -12 300 58 2232 223 76 16 chr5 166304722 166305363 -33324787 - L1MD2 LINE L1 -1708 4438 3759 986 162 50 0 chr5 166305546 166305725 -33324425 - MER20 DNA MER1_type 0 219 32 2375 79 3 0 chr5 166305824 166306129 -33324021 - AluSq SINE Alu -7 306 1 560 246 133 33 chr5 166306235 166306464 -33323686 - MIR SINE MIR -8 254 1 654 168 59 160 chr5 166308076 166308248 -33321902 + MIR SINE MIR 19 159 -103 2217 88 0 0 chr5 166308248 166308558 -33321592 - AluSx SINE Alu 0 310 1 654 168 59 160 chr5 166308558 166308640 -33321510 + MIR SINE MIR 159 248 -14 201 306 113 24 chr5 166308940 166309064 -33321086 + MIR3 SINE MIR 29 163 -45 705 97 11 0 chr5 166309377 166309470 -33320680 - AluS SINE Alu -217 95 2 3952 169 80 14 chr5 166309617 166309920 -33320230 + L1MC1 LINE L1 4850 5131 -1202 2128 109 7 0 chr5 166309920 166310213 -33319937 + AluSx SINE Alu 1 295 -17 3952 169 80 14 chr5 166310213 166311290 -33318860 + L1MC1 LINE L1 5131 6333 0 239 292 0 31 chr5 166311292 166311357 -33318793 - MIR SINE MIR -94 114 52 319 213 88 0 chr5 166311762 166311842 -33318308 - MER5A DNA MER1_type -22 167 81 214 216 39 0 chr5 166311867 166311918 -33318232 + MIR3 SINE MIR 149 201 -7 247 305 0 0 chr5 166312837 166312896 -33317254 + L2 LINE L2 3194 3252 -20 378 289 7 37 chr5 166314389 166314524 -33315626 + MIR3 SINE MIR 6 136 -72 2017 131 0 0 chr5 166316315 166316612 -33313538 + AluSx SINE Alu 1 297 -15 317 219 27 0 chr5 166316638 166316711 -33313439 + MIR3 SINE MIR 86 160 -48 358 241 53 11 chr5 166316742 166316883 -33313267 - MER5A DNA MER1_type -28 150 5 428 294 43 65 chr5 166317084 166317268 -33312882 - MER5A DNA MER1_type 0 189 10 3191 103 87 30 chr5 166317274 166317769 -33312381 + MER1A DNA MER1_type 5 527 0 276 341 49 37 chr5 166318150 166318314 -33311836 - L2 LINE L2 -3 3269 3104 * 654 253 91 83 chr5 166318308 166318561 -33311589 - MIR SINE MIR -1 261 7 639 283 108 29 chr5 166318635 166319110 -33311040 - L2 LINE L2 -247 3025 2506 320 341 69 56 chr5 166319305 166319720 -33310430 + L1ME3A LINE L1 5587 6008 -156 266 191 64 100 chr5 166320649 166320759 -33309391 - MIR SINE MIR -47 215 110 2109 146 130 38 chr5 166320891 166321165 -33308985 + Charlie1b DNA MER1_type 2 249 -2512 3124 144 6 0 chr5 166321165 166321652 -33308498 + L1PA15 LINE L1 5675 6164 -1 2109 146 130 38 chr5 166321652 166321855 -33308295 + Charlie1b DNA MER1_type 249 523 0 328 269 20 7 chr5 166321972 166322163 -33307987 + MER113 DNA MER1_type? 1 243 -278 5789 249 110 29 chr5 166322180 166324116 -33306034 + L2 LINE L2 938 3093 -220 1809 147 7 23 chr5 166324116 166324423 -33305727 + AluSx SINE Alu 1 302 -10 5789 249 110 29 chr5 166324423 166324663 -33305487 + L2 LINE L2 3093 3312 -1 347 223 38 89 chr5 166324682 166324711 -33305439 + MER113 DNA MER1_type? 290 319 -202 2184 110 0 7 chr5 166324711 166325020 -33305130 + AluSx SINE Alu 1 307 -5 347 223 38 89 chr5 166325020 166325147 -33305003 + MER113 DNA MER1_type? 319 438 -83 1526 154 0 72 chr5 166325938 166326283 -33303867 + AluJo SINE Alu 3 312 0 2149 114 0 0 chr5 166326949 166327248 -33302902 + AluSx SINE Alu 1 299 -13 328 292 57 2 chr5 166327332 166327467 -33302683 - MER5A DNA MER1_type 0 178 38 648 247 22 22 chr5 166327472 166327650 -33302500 + L1ME3A LINE L1 5993 6170 0 354 302 16 31 chr5 166327741 166327870 -33302280 + MER5A DNA MER1_type 63 189 0 275 348 148 9 chr5 166328206 166328416 -33301734 + MIR SINE MIR 8 246 -16 691 332 15 23 chr5 166328433 166328692 -33301458 - MIR SINE MIR 0 262 6 577 246 214 19 chr5 166328712 166328927 -33301223 - MIR SINE MIR -2 260 4 320 244 227 17 chr5 166330553 166330729 -33299421 - L2 LINE L2 -246 3067 2855 351 289 41 81 chr5 166331414 166331613 -33298537 + MIR3 SINE MIR 17 205 -43 202 216 0 0 chr5 166331855 166331892 -33298258 + (TATG)n Simple_repeat Simple_repeat 2 38 0 1669 143 0 18 chr5 166331951 166332231 -33297919 - AluJb SINE Alu 0 312 38 2243 60 18 0 chr5 166332241 166332525 -33297625 - AluY SINE Alu -22 289 1 253 309 52 31 chr5 166332635 166332732 -33297418 - L2 LINE L2 -6 3266 3168 459 261 89 49 chr5 166332813 166333016 -33297134 - MIR SINE MIR -49 213 3 655 222 8 8 chr5 166333561 166333687 -33296463 - FLAM_A SINE Alu -7 126 1 2153 97 17 0 chr5 166334462 166334760 -33295390 - AluSx SINE Alu -9 303 1 630 226 66 6 chr5 166334780 166334956 -33295194 - MIR SINE MIR -41 221 34 744 289 73 29 chr5 166334974 166335220 -33294930 - MIR SINE MIR 0 262 6 1650 138 49 23 chr5 166335324 166335628 -33294522 - AluSx SINE Alu 0 312 1 657 203 36 7 chr5 166336202 166336340 -33293810 + MIR3 SINE MIR 66 207 -1 376 266 129 52 chr5 166337603 166337851 -33292299 - L1ME2 LINE L1 -283 5881 5615 313 48 0 24 chr5 166337852 166337894 -33292256 - LTR33A LTR ERVL -1 522 482 2509 209 24 14 chr5 166337898 166338452 -33291698 - L1MD2 LINE L1 -2 6357 5799 1003 263 121 43 chr5 166338459 166338855 -33291295 - LTR33A LTR ERVL -95 428 2 705 263 61 16 chr5 166338875 166339283 -33290867 - L1MD2 LINE L1 -551 5613 5191 631 190 108 20 chr5 166339303 166339418 -33290732 - MER20B DNA MER1_type -66 717 613 2066 123 0 3 chr5 166339418 166339727 -33290423 + AluSx SINE Alu 1 308 -4 631 190 108 20 chr5 166339727 166339806 -33290344 - MER20B DNA MER1_type -170 613 506 610 223 166 0 chr5 166340554 166340729 -33289421 - MER20B DNA MER1_type -289 494 291 829 201 23 0 chr5 166340734 166340908 -33289242 + AluJo SINE Alu 127 304 -8 456 257 0 9 chr5 166340978 166341083 -33289067 - MER20B DNA MER1_type -584 199 96 204 286 0 0 chr5 166341266 166341315 -33288835 - MIR SINE MIR -65 143 95 210 256 23 116 chr5 166341530 166341616 -33288534 + MIR SINE MIR 38 115 -93 21 57 0 0 chr5 166341734 166341769 -33288381 + AT_rich Low_complexity Low_complexity 1 35 0 1741 158 13 7 chr5 166341830 166342140 -33288010 - AluJb SINE Alu 0 312 1 1939 108 0 24 chr5 166342173 166342312 -33287838 + AluSx SINE Alu 1 131 -181 2142 105 0 7 chr5 166342312 166342616 -33287534 + AluSq SINE Alu 3 304 -9 1939 108 0 24 chr5 166342616 166342763 -33287387 + AluSx SINE Alu 131 280 -32 189 0 0 0 chr5 166342763 166342784 -33287366 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 561 332 48 35 chr5 166342799 166343112 -33287038 - L1MC4a LINE L1 -1959 5849 5533 215 231 37 111 chr5 166343144 166343201 -33286949 + MIR3 SINE MIR 92 139 -69 1576 161 10 21 chr5 166343201 166343514 -33286636 + AluJo SINE Alu 2 312 0 215 231 37 111 chr5 166343514 166343564 -33286586 + MIR3 SINE MIR 139 191 -17 247 301 27 0 chr5 166343779 166343852 -33286298 - L3 LINE CR1 -875 702 628 * 364 215 82 67 chr5 166343836 166343971 -33286179 + L3 LINE CR1 1421 1557 -20 278 223 19 97 chr5 166344124 166344227 -33285923 + MIR SINE MIR 46 140 -68 396 293 20 54 chr5 166344826 166344973 -33285177 + MIR SINE MIR 69 210 -52 631 279 130 5 chr5 166345324 166345539 -33284611 + MIR SINE MIR 17 258 -4 1079 181 5 19 chr5 166345739 166345949 -33284201 + MER3 DNA MER1_type 3 209 0 210 326 124 16 chr5 166346296 166346425 -33283725 - MER5B DNA MER1_type 0 178 36 318 196 0 0 chr5 166346581 166346632 -33283518 - MER7A DNA MER2_type 0 336 286 1856 156 53 0 chr5 166346747 166347048 -33283102 - MER7A DNA MER2_type -31 315 1 535 153 0 181 chr5 166347048 166347192 -33282958 - ORSL DNA AcHobo -157 118 1 1059 278 93 0 chr5 166347311 166347667 -33282483 - L2 LINE L2 -3 3310 2922 3290 158 32 35 chr5 166348357 166348982 -33281168 + L1MA8 LINE L1 5413 6035 -256 1103 118 20 90 chr5 166349117 166349244 -33280906 + L1MA8 LINE L1 6050 6152 -139 1875 163 0 0 chr5 166349244 166349544 -33280606 + AluJo SINE Alu 1 300 -12 1103 118 20 90 chr5 166349544 166349671 -33280479 + L1MA8 LINE L1 6152 6286 -5 343 319 17 0 chr5 166349713 166349829 -33280321 + MIR SINE MIR 145 262 0 353 279 45 18 chr5 166349982 166350093 -33280057 - MIR3 SINE MIR -52 156 43 427 247 138 26 chr5 166350211 166350429 -33279721 + MIR SINE MIR 17 260 -2 373 311 42 63 chr5 166351017 166351246 -33278904 + MIR SINE MIR 3 231 -31 810 237 82 27 chr5 166351499 166351718 -33278432 - MIR SINE MIR -4 258 28 219 69 0 0 chr5 166351892 166351921 -33278229 + (CAGCC)n Simple_repeat Simple_repeat 2 30 0 538 282 15 8 chr5 166352399 166352530 -33277620 + MER5A DNA MER1_type 58 189 0 185 314 127 51 chr5 166352708 166352826 -33277324 - MER5A DNA MER1_type -46 143 17 2308 204 57 20 chr5 166353117 166353660 -33276490 + L1ME3A LINE L1 5603 6165 -5 2158 149 0 0 chr5 166353671 166353979 -33276171 + AluSx SINE Alu 1 308 -4 312 322 171 0 chr5 166354369 166354515 -33275635 - MIR SINE MIR -70 192 22 612 259 39 47 chr5 166354556 166354788 -33275362 - MIR SINE MIR -21 241 12 180 301 0 97 chr5 166354834 166354947 -33275203 - MER5B DNA MER1_type -40 138 37 216 305 32 32 chr5 166355054 166355149 -33275001 + L3 LINE CR1 1376 1470 -107 297 270 32 24 chr5 166355167 166355293 -33274857 + L1ME3A LINE L1 5985 6111 -59 2091 121 4 4 chr5 166355298 166355578 -33274572 + AluSx SINE Alu 14 293 -19 501 271 183 13 chr5 166355781 166356004 -33274146 - MIR SINE MIR 0 262 3 389 217 47 145 chr5 166356673 166356814 -33273336 + L1MC5 LINE L1 7703 7813 -148 2228 134 0 3 chr5 166356814 166357127 -33273023 + AluSx SINE Alu 1 312 0 389 217 47 145 chr5 166357127 166357220 -33272930 + L1MC5 LINE L1 7813 7914 -47 329 347 176 15 chr5 166357312 166357704 -33272446 + L2 LINE L2 2808 3262 -10 249 83 0 0 chr5 166358072 166358108 -33272042 + (TG)n Simple_repeat Simple_repeat 2 37 0 255 231 115 19 chr5 166358333 166358439 -33271711 + MIR3 SINE MIR 61 180 -28 481 260 124 23 chr5 166358526 166358703 -33271447 - L2 LINE L2 0 3313 3119 484 243 118 14 chr5 166358811 166358955 -33271195 - MIR SINE MIR -55 207 49 201 303 191 0 chr5 166358890 166358979 -33271171 + MER5B DNA MER1_type 36 141 -37 * 1741 165 31 21 chr5 166359569 166359860 -33270290 + AluJo SINE Alu 1 294 -18 313 274 85 9 chr5 166359875 166359981 -33270169 - MIR3 SINE MIR -29 179 66 373 268 86 61 chr5 166361421 166361619 -33268531 - MIR3 SINE MIR 0 208 6 867 200 61 39 chr5 166361658 166361888 -33268262 + MIR SINE MIR 28 262 0 356 270 0 0 chr5 166361922 166361996 -33268154 + MIR SINE MIR 102 175 -87 201 244 0 0 chr5 166362108 166362153 -33267997 + MER5B DNA MER1_type 134 178 0 241 309 86 0 chr5 166362275 166362356 -33267794 - L2 LINE L2 -30 3242 3155 * 374 316 112 32 chr5 166362344 166362531 -33267619 - L3 LINE CR1 -18 1559 1358 276 306 0 0 chr5 166362595 166362667 -33267483 + MIR SINE MIR 74 145 -117 2315 109 0 3 chr5 166363677 166363980 -33266170 + AluSc SINE Alu 1 302 -7 475 284 97 14 chr5 166363997 166364196 -33265954 - MIR SINE MIR -51 211 11 570 150 187 10 chr5 166364313 166364440 -33265710 + MER5B DNA MER1_type 1 166 -23 261 299 81 0 chr5 166364441 166364528 -33265622 + MIR3 SINE MIR 109 202 -6 574 178 56 9 chr5 166364919 166365026 -33265124 + MER81 DNA DNA 3 114 0 211 244 0 0 chr5 166366006 166366051 -33264099 + (TAA)n Simple_repeat Simple_repeat 3 47 0 314 87 0 0 chr5 166366125 166366171 -33263979 - MADE1 DNA Mariner 0 80 35 561 296 6 19 chr5 166366176 166366335 -33263815 - MIR SINE MIR -105 157 1 558 227 17 0 chr5 166366389 166366508 -33263642 + MER45A DNA AcHobo 58 178 0 672 246 79 37 chr5 166366761 166366976 -33263174 + MIR SINE MIR 3 226 -36 180 367 33 0 chr5 166367138 166367198 -33262952 - MIR SINE MIR -121 141 80 197 185 11 174 chr5 166367568 166367660 -33262490 - MER5A DNA MER1_type -2 187 111 274 85 102 0 chr5 166367694 166367753 -33262397 - L1MA8 LINE L1 -4 6287 6223 291 250 28 21 chr5 166367802 166367896 -33262254 - MIR3 SINE MIR -50 158 60 413 358 7 0 chr5 166368178 166368326 -33261824 + MIR3 SINE MIR 19 167 -41 203 318 108 39 chr5 166368325 166368454 -33261696 + MER5A DNA MER1_type 7 144 -45 * 223 283 0 0 chr5 166368773 166368819 -33261331 + MER5A DNA MER1_type 144 189 0 237 343 46 57 chr5 166369468 166369643 -33260507 - L2 LINE L2 -27 3245 3073 239 188 0 21 chr5 166369833 166369881 -33260269 + L2 LINE L2 3222 3268 -4 615 27 0 0 chr5 166369988 166370061 -33260089 + (TGGA)n Simple_repeat Simple_repeat 2 74 0 206 333 0 0 chr5 166370408 166370495 -33259655 - MIR3 SINE MIR -6 202 116 234 253 11 88 chr5 166370662 166370689 -33259461 + MER5A DNA MER1_type 29 56 -133 1530 173 25 110 chr5 166370689 166371088 -33259062 + MLT1A1 LTR MaLR 1 365 0 234 253 11 88 chr5 166371088 166371151 -33258999 + MER5A DNA MER1_type 56 112 -77 184 265 73 59 chr5 166371226 166371294 -33258856 - MIR SINE MIR -97 111 43 847 178 18 6 chr5 166371666 166371829 -33258321 - MER5B DNA MER1_type 0 178 14 359 172 11 97 chr5 166372327 166372420 -33257730 + MER96 DNA MER1_type? 91 175 0 226 244 49 12 chr5 166372478 166372560 -33257590 - MLT1K LTR MaLR -503 85 1 394 309 54 13 chr5 166372572 166372721 -33257429 + MIR SINE MIR 3 157 -105 1333 230 65 18 chr5 166372913 166373296 -33256854 + L1ME3 LINE L1 5623 6023 -139 2011 143 7 7 chr5 166373343 166373644 -33256506 + AluJb SINE Alu 1 301 -11 451 293 158 34 chr5 166373956 166374253 -33255897 + MER102b DNA MER1_type 6 339 -2 965 204 22 4 chr5 166374376 166374601 -33255549 + MER58 DNA MER1_type 1 229 -112 238 259 0 0 chr5 166374628 166374682 -33255468 + MER58 DNA MER1_type 2367 2420 0 390 318 104 26 chr5 166375085 166375239 -33254911 - L2 LINE L2 0 3272 3107 511 243 86 53 chr5 166375386 166375538 -33254612 - MIR3 SINE MIR -22 186 30 604 299 79 45 chr5 166375568 166375922 -33254228 - L2 LINE L2 0 3313 2948 371 299 21 0 chr5 166376421 166376518 -33253632 + MIR SINE MIR 17 115 -93 186 43 0 0 chr5 166376602 166376625 -33253525 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 375 272 128 56 chr5 166376810 166376870 -33253280 - MIR SINE MIR -57 205 151 867 150 0 0 chr5 166376870 166377003 -33253147 - FLAM_C SINE Alu 0 133 1 375 272 128 56 chr5 166377003 166377122 -33253028 - MIR SINE MIR -111 151 13 261 363 0 0 chr5 166377217 166377297 -33252853 + MIR SINE MIR 183 262 0 181 357 36 0 chr5 166377344 166377400 -33252750 + L3b LINE CR1 1500 1557 -26 559 162 0 0 chr5 166377430 166377529 -33252621 + FLAM_A SINE Alu 41 139 -3 193 311 27 14 chr5 166377587 166377661 -33252489 - MIR SINE MIR -187 75 1 4551 181 27 21 chr5 166377682 166378042 -33252108 - L1MB7 LINE L1 -9 6175 5819 2167 112 27 0 chr5 166378042 166378336 -33251814 - AluSq SINE Alu -11 302 1 4551 181 27 21 chr5 166378336 166379070 -33251080 - L1MB7 LINE L1 -365 5819 5071 1917 136 4 0 chr5 166379070 166379342 -33250808 + AluSx SINE Alu 1 273 -39 4551 181 27 21 chr5 166379342 166379804 -33250346 - L1MB7 LINE L1 -1113 5071 4613 21 0 0 0 chr5 166379864 166379885 -33250265 + AT_rich Low_complexity Low_complexity 1 21 0 245 289 145 0 chr5 166380291 166380374 -33249776 - MIR SINE MIR -5 257 163 1609 180 14 16 chr5 166380408 166380775 -33249375 - Charlie5 DNA MER1_type 0 2624 2259 718 155 0 0 chr5 166380798 166380914 -33249236 - MER3 DNA MER1_type -87 122 54 227 318 154 0 chr5 166380928 166381038 -33249112 + L2 LINE L2 3146 3272 0 347 295 62 0 chr5 166381086 166381198 -33248952 - MIR SINE MIR -108 154 36 278 296 104 26 chr5 166381612 166381727 -33248423 - MIR3 SINE MIR -9 199 76 218 313 15 15 chr5 166382457 166382524 -33247626 - L2 LINE L2 -3 3310 3244 872 33 73 10 chr5 166382544 166382948 -33247202 + (TG)n Simple_repeat Simple_repeat 1 429 0 188 351 61 0 chr5 166383233 166383347 -33246803 + L2 LINE L2 2928 3048 -224 971 120 14 0 chr5 166383628 166383770 -33246380 + AluSg/x SINE Alu 158 301 -11 326 291 68 34 chr5 166384094 166384211 -33245939 - L2 LINE L2 -228 3044 2924 544 281 179 0 chr5 166384521 166384717 -33245433 - MIR SINE MIR -17 245 15 486 244 114 103 chr5 166384988 166385259 -33244891 - MER115 DNA AcHobo -320 373 100 333 328 8 15 chr5 166385883 166386017 -33244133 + (TG)n Simple_repeat Simple_repeat 2 134 0 964 164 0 0 chr5 166386150 166386326 -33243824 - AluSg/x SINE Alu 0 311 136 1769 108 0 13 chr5 166386331 166386562 -33243588 - AluSx SINE Alu -84 228 1 191 219 0 0 chr5 166386647 166386688 -33243462 + L2 LINE L2 3273 3313 0 508 217 61 9 chr5 166386864 166386979 -33243171 + MIR3 SINE MIR 36 156 -52 615 246 77 31 chr5 166387854 166388049 -33242101 + MIR SINE MIR 59 262 0 356 265 115 65 chr5 166388118 166388478 -33241672 - MLT1J LTR MaLR -10 605 120 241 254 63 0 chr5 166388576 166388639 -33241511 - MLT1L LTR MaLR -545 70 4 804 286 40 94 chr5 166388668 166389265 -33240885 - MLT1K LTR MaLR 0 588 24 290 238 111 66 chr5 166389270 166389451 -33240699 - MIR SINE MIR -51 211 23 456 282 107 7 chr5 166389608 166389757 -33240393 + MIR3 SINE MIR 21 184 -24 288 300 0 0 chr5 166390254 166390324 -33239826 - MIR SINE MIR -58 150 81 243 300 91 27 chr5 166391314 166391424 -33238726 - L2 LINE L2 -19 3253 3137 572 318 156 22 chr5 166391537 166392268 -33237882 + L2 LINE L2 2459 3300 -13 242 361 56 0 chr5 166392300 166392408 -33237742 - MIR3 SINE MIR -12 196 83 204 274 215 16 chr5 166392423 166392609 -33237541 - L2 LINE L2 -286 3027 2805 834 245 144 89 chr5 166393226 166393438 -33236712 - L2 LINE L2 -36 3277 3078 1720 159 7 34 chr5 166393438 166393572 -33236578 + AluJo SINE Alu 5 141 -171 1917 134 0 47 chr5 166393572 166393870 -33236280 + AluSx SINE Alu 1 284 -28 218 32 32 0 chr5 166393870 166393901 -33236249 + (TA)n Simple_repeat Simple_repeat 2 33 0 1720 159 7 34 chr5 166393901 166394061 -33236089 + AluJo SINE Alu 139 292 -20 834 245 144 89 chr5 166394061 166394285 -33235865 - L2 LINE L2 -235 3078 2817 211 311 61 61 chr5 166394339 166394487 -33235663 - MIR SINE MIR -34 228 81 297 170 93 103 chr5 166395558 166395632 -33234518 - Charlie1b DNA MER1_type -2238 523 450 2197 107 3 23 chr5 166395632 166395940 -33234210 + AluSq SINE Alu 1 302 -11 297 170 93 103 chr5 166395940 166395975 -33234175 - Charlie1b DNA MER1_type -2311 450 416 739 122 16 8 chr5 166395975 166396098 -33234052 + L1PB3 LINE L1 6029 6152 -2 297 170 93 103 chr5 166396098 166396181 -33233969 - Charlie1b DNA MER1_type -2345 416 332 1050 163 0 0 chr5 166396189 166396349 -33233801 - FRAM SINE Alu -13 163 4 776 233 127 18 chr5 166396351 166396626 -33233524 - Charlie1b DNA MER1_type -214 309 5 719 236 83 1 chr5 166396644 166396819 -33233331 + MIR SINE MIR 74 262 0 180 0 0 0 chr5 166396966 166396986 -33233164 + (T)n Simple_repeat Simple_repeat 1 20 0 270 291 250 14 chr5 166397672 166397820 -33232330 - MIR SINE MIR -15 247 65 332 210 163 15 chr5 166398065 166398177 -33231973 - MIR SINE MIR -62 146 30 213 246 102 85 chr5 166398834 166398952 -33231198 - MIR SINE MIR 0 262 143 447 226 11 32 chr5 166398968 166399061 -33231089 + MER5A DNA MER1_type 1 91 -98 579 258 98 44 chr5 166399225 166399278 -33230872 + L1MC4a LINE L1 5670 5719 -2089 895 124 0 29 chr5 166399278 166399415 -33230735 + FLAM_C SINE Alu 1 133 0 579 258 98 44 chr5 166399415 166399679 -33230471 + L1MC4a LINE L1 5719 6004 -1804 923 268 13 4 chr5 166399840 166400075 -33230075 - MIR SINE MIR -19 243 7 440 276 67 0 chr5 166400065 166400199 -33229951 - MIR SINE MIR -41 221 79 * 233 87 0 22 chr5 166400545 166400591 -33229559 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 2013 128 0 7 chr5 166400592 166400874 -33229276 - AluSx SINE Alu -32 280 1 2368 92 3 0 chr5 166400938 166401232 -33228918 + AluSp SINE Alu 1 295 -18 546 248 8 8 chr5 166401433 166401554 -33228596 + MIR SINE MIR 20 140 -68 2314 106 6 6 chr5 166401608 166401919 -33228231 + AluSx SINE Alu 2 312 0 194 256 122 24 chr5 166402166 166402248 -33227902 + L2 LINE L2 3136 3225 -47 210 237 17 0 chr5 166402248 166402307 -33227843 + (TGGA)n Simple_repeat Simple_repeat 2 61 0 238 287 58 86 chr5 166402318 166402492 -33227658 - L2 LINE L2 -187 3085 2917 2155 96 33 0 chr5 166404306 166404577 -33225573 + AluSg SINE Alu 1 280 -30 217 0 0 0 chr5 166404577 166404601 -33225549 + (TAAAA)n Simple_repeat Simple_repeat 2 160 0 466 274 9 9 chr5 166404618 166404731 -33225419 + MIR SINE MIR 33 145 -63 221 81 0 27 chr5 166404913 166404950 -33225200 + (GGAA)n Simple_repeat Simple_repeat 2 37 0 233 250 0 0 chr5 166405213 166405265 -33224885 + LTR30 LTR ERV1 1 52 -670 963 155 161 10 chr5 166405265 166405458 -33224692 + LTR12 LTR ERV1 53 274 -440 347 219 0 12 chr5 166405464 166405546 -33224604 + LTR30 LTR ERV1 544 624 -98 806 134 25 0 chr5 166405546 166405665 -33224485 + LTR12 LTR ERV1 359 480 -234 855 226 45 79 chr5 166405773 166406127 -33224023 - L1MC4 LINE L1 0 8042 7701 389 278 66 12 chr5 166406572 166406737 -33223413 + L1ME3 LINE L1 5986 6161 -1 252 306 79 23 chr5 166406933 166407149 -33223001 + L1ME4a LINE L1 5835 6062 -59 232 253 22 0 chr5 166407215 166407306 -33222844 - L1MC4 LINE L1 -1336 6706 6614 285 211 18 0 chr5 166407371 166407428 -33222722 + MER103 DNA DNA 102 159 -7 639 306 100 8 chr5 166407993 166408254 -33221896 - L3 LINE CR1 -3 1574 1290 741 281 5 14 chr5 166408305 166408522 -33221628 - MIR SINE MIR 0 262 48 842 200 13 0 chr5 166408549 166408699 -33221451 + FAM SINE Alu 1 152 -33 192 77 0 0 chr5 166408850 166408876 -33221274 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 720 197 16 0 chr5 166409374 166409501 -33220649 + FLAM_A SINE Alu 5 133 0 243 308 51 0 chr5 166409675 166409753 -33220397 - MER91C DNA MER1_type -25 115 34 435 240 153 109 chr5 166410176 166410489 -33219661 + MER102b DNA MER1_type 4 330 -11 203 0 0 36 chr5 166411213 166411241 -33218909 + (TAAAAA)n Simple_repeat Simple_repeat 3 29 0 219 156 89 0 chr5 166411390 166411435 -33218715 - L2 LINE L2 -4 3268 3220 401 317 85 85 chr5 166411622 166412240 -33217910 - L2 LINE L2 -3 3269 2648 833 130 15 8 chr5 166412240 166412371 -33217779 + FLAM_C SINE Alu 1 132 -11 383 245 19 0 chr5 166413289 166413399 -33216751 - MIR SINE MIR -84 124 11 326 285 139 21 chr5 166416651 166416795 -33213355 + MIR3 SINE MIR 47 207 -1 1790 163 0 30 chr5 166418974 166419275 -33210875 - AluJo SINE Alu -20 292 1 24 0 0 0 chr5 166419828 166419852 -33210298 + AT_rich Low_complexity Low_complexity 1 24 0 523 289 22 11 chr5 166420009 166420189 -33209961 + MIR SINE MIR 76 257 -5 853 161 0 15 chr5 166420324 166420461 -33209689 - AluJo SINE Alu -176 136 2 2282 181 19 74 chr5 166420464 166420637 -33209513 - L1MD3 LINE L1 -14 7981 7800 1512 120 136 27 chr5 166420637 166420766 -33209384 - AluSg SINE Alu -16 294 180 2320 104 0 0 chr5 166420766 166421064 -33209086 - AluSc SINE Alu -11 298 1 1512 120 136 27 chr5 166421064 166421192 -33208958 - AluSg SINE Alu -130 180 9 2282 181 19 74 chr5 166421192 166421558 -33208592 - L1MD3 LINE L1 -195 7800 7472 397 224 0 0 chr5 166421590 166421666 -33208484 + L1MD3 LINE L1 7685 7760 -235 339 234 19 56 chr5 166421681 166421788 -33208362 - MLT1F1 LTR MaLR -429 138 36 2256 110 3 3 chr5 166422082 166422382 -33207768 + AluSx SINE Alu 1 300 -12 2115 83 58 0 chr5 166423162 166423617 -33206533 + AluSp SINE Alu 1 471 0 796 220 128 124 chr5 166423618 166423943 -33206207 + MLT1J LTR MaLR 33 362 -149 909 205 0 6 chr5 166423943 166424104 -33206046 - FRAM SINE Alu -6 160 1 796 220 128 124 chr5 166424104 166424255 -33205895 + MLT1J LTR MaLR 362 511 0 480 18 0 0 chr5 166424392 166424449 -33205701 + (TG)n Simple_repeat Simple_repeat 1 57 0 244 220 68 0 chr5 166424449 166424508 -33205642 + MIR SINE MIR 89 151 -57 1773 165 11 0 chr5 166424509 166424811 -33205339 + AluJo SINE Alu 1 305 0 1072 232 24 0 chr5 166424836 166425047 -33205103 + MER58A DNA MER1_type 1 216 -8 5040 155 48 59 chr5 166425054 166426137 -33204013 + MER11C LTR ERVK 1 1071 0 2329 95 3 3 chr5 166426294 166426598 -33203552 + AluSq SINE Alu 1 304 -9 576 223 60 43 chr5 166426622 166426806 -33203344 - L1MC5 LINE L1 -34 7927 7741 1299 143 0 0 chr5 166426829 166427018 -33203132 - AluSg/x SINE Alu 0 312 124 1108 215 78 48 chr5 166427029 166427466 -33202684 - L1MC5 LINE L1 -244 7717 7268 233 308 29 29 chr5 166427476 166427580 -33202570 - L1MC4a LINE L1 -458 7350 7247 2195 131 0 0 chr5 166427672 166427970 -33202180 + AluSx SINE Alu 1 298 -14 405 0 0 0 chr5 166428250 166428295 -33201855 + (TA)n Simple_repeat Simple_repeat 2 46 0 207 0 0 0 chr5 166428294 166428317 -33201833 + (CA)n Simple_repeat Simple_repeat 2 24 0 * 24 0 0 0 chr5 166428419 166428443 -33201707 + AT_rich Low_complexity Low_complexity 1 24 0 755 195 101 0 chr5 166428650 166428799 -33201351 - FRAM SINE Alu -17 159 1 1968 122 64 14 chr5 166428996 166429291 -33200859 - AluSx SINE Alu -2 310 1 2385 93 0 7 chr5 166429731 166430033 -33200117 + AluSg SINE Alu 1 300 -10 609 200 36 0 chr5 166430155 166430265 -33199885 - MER81 DNA DNA 0 114 1 470 270 0 7 chr5 166430429 166430577 -33199573 - L1MC4a LINE L1 -1983 5825 5679 405 291 12 18 chr5 166431318 166431483 -33198667 + MER103 DNA DNA 2 165 -1 2018 142 3 7 chr5 166431706 166432002 -33198148 + AluSx SINE Alu 1 295 -17 210 190 35 35 chr5 166432564 166432622 -33197528 + MIR SINE MIR 38 95 -113 451 112 2 0 chr5 166432624 166432709 -33197441 + L1MA8 LINE L1 6213 6290 -1 265 220 17 0 chr5 166432711 166432770 -33197380 + MIR3 SINE MIR 98 157 -51 229 237 26 88 chr5 166432922 166433036 -33197114 + L1ME3 LINE L1 5961 6067 -95 1272 231 133 46 chr5 166433140 166433598 -33196552 - MLT1J LTR MaLR -13 498 1 234 278 0 0 chr5 166433768 166433822 -33196328 + MIR3 SINE MIR 151 204 -4 316 298 18 9 chr5 166434133 166434247 -33195903 - MIR3 SINE MIR -54 154 40 288 305 99 14 chr5 166434245 166434386 -33195764 - MIR SINE MIR -103 159 7 * 3155 97 14 7 chr5 166434745 166435190 -33194960 + MER83 LTR ERV1 1 448 0 1814 138 45 14 chr5 166435894 166436184 -33193966 + AluJb SINE Alu 1 299 -13 1903 165 0 0 chr5 166436203 166436488 -33193662 + AluJo SINE Alu 13 297 -15 258 244 156 11 chr5 166436977 166437067 -33193083 - MLT1K LTR MaLR -11 577 475 545 300 32 36 chr5 166437263 166437516 -33192634 - MLT1J LTR MaLR -259 252 1 551 204 0 6 chr5 166437569 166437750 -33192400 + CT-rich Low_complexity Low_complexity 1 180 0 2206 119 0 7 chr5 166438188 166438490 -33191660 - AluSq SINE Alu -13 300 1 2264 101 0 3 chr5 166438493 166438781 -33191369 - AluSc SINE Alu -20 289 3 392 254 24 8 chr5 166438786 166438912 -33191238 + Charlie1 DNA MER1_type 2632 2759 -2 1710 158 32 0 chr5 166439005 166439284 -33190866 + AluJo SINE Alu 6 293 -19 842 258 43 29 chr5 166439315 166439772 -33190378 - MLT1J LTR MaLR -2 509 3 2071 130 7 3 chr5 166440080 166440379 -33189771 + AluSx SINE Alu 1 300 -12 9940 152 32 34 chr5 166440379 166440627 -33189523 + L1MA3 LINE L1 3079 3326 -2820 213 39 0 0 chr5 166440627 166440653 -33189497 + (CCCCCT)n Simple_repeat Simple_repeat 3 28 0 10651 45 9 78 chr5 166440657 166442112 -33188038 + SVA Other Other 32 1386 0 9940 152 32 34 chr5 166442112 166443834 -33186316 + L1MA3 LINE L1 3329 5050 -1096 2063 95 0 7 chr5 166443834 166444107 -33186043 + AluSg SINE Alu 39 309 -1 6460 109 15 8 chr5 166444108 166445079 -33185071 + L1MA3 LINE L1 5328 6305 0 246 237 17 17 chr5 166445401 166445460 -33184690 + MER102b DNA MER1_type 233 291 -50 1555 169 15 32 chr5 166445460 166445798 -33184352 - L1MA4A LINE L1 -1 6302 5971 2902 162 28 66 chr5 166445844 166446480 -33183670 - LTR9 LTR ERV1 0 612 1 204 308 26 13 chr5 166446662 166446740 -33183410 - L2 LINE L2 -493 2821 2743 389 270 46 20 chr5 166447278 166447430 -33182720 - MIR SINE MIR -3 259 104 318 351 32 11 chr5 166447578 166447763 -33182387 + MLT1K LTR MaLR 2 190 -398 2205 90 4 7 chr5 166447954 166448232 -33181918 + AluSx SINE Alu 24 300 -12 312 231 183 0 chr5 166448251 166448355 -33181795 + L2 LINE L2 3191 3313 0 240 281 206 14 chr5 166448382 166448528 -33181622 - MIR3 SINE MIR -8 200 27 263 179 0 18 chr5 166448591 166448647 -33181503 - MER113 DNA MER1_type? -70 451 397 2307 113 3 0 chr5 166448647 166448956 -33181194 - AluSg SINE Alu 0 310 1 1766 161 25 3 chr5 166448961 166449247 -33180903 - AluJo SINE Alu -20 292 1 336 219 14 0 chr5 166449302 166449375 -33180775 - MER113 DNA MER1_type? -123 398 325 477 258 82 28 chr5 166449554 166449736 -33180414 - MIR SINE MIR -51 211 20 650 318 113 24 chr5 166449943 166450437 -33179713 + L2 LINE L2 2262 2799 -515 304 211 23 120 chr5 166450450 166450527 -33179623 - MER94 DNA DNA -12 122 62 1204 177 224 3 chr5 166450527 166450826 -33179324 + MLT1A1 LTR MaLR 1 365 0 304 211 23 120 chr5 166450826 166450881 -33179269 - MER94 DNA DNA -72 62 3 492 309 122 35 chr5 166450918 166451320 -33178830 + L2 LINE L2 2867 3303 -10 658 259 64 23 chr5 166451658 166451878 -33178272 + MIR SINE MIR 13 241 -21 185 271 281 0 chr5 166452392 166452488 -33177662 - MIR3 SINE MIR -3 205 83 329 224 40 0 chr5 166452761 166452837 -33177313 + MLT1L LTR MaLR 4 82 -533 474 250 138 46 chr5 166453078 166453274 -33176876 + MIR SINE MIR 12 225 -37 457 317 125 9 chr5 166453718 166453942 -33176208 + MIR SINE MIR 10 259 -3 412 258 15 37 chr5 166455879 166456029 -33174121 - MIR SINE MIR -66 196 54 360 177 64 182 chr5 166456063 166456364 -33173786 + L1MC5 LINE L1 6991 7255 -728 1124 272 97 32 chr5 166456504 166457133 -33173017 + L1MC5 LINE L1 7256 7925 -36 943 220 31 75 chr5 166458491 166458594 -33171556 + L1MD2 LINE L1 6043 6149 -210 279 54 0 0 chr5 166458594 166458631 -33171519 + (CA)n Simple_repeat Simple_repeat 2 38 0 943 220 31 75 chr5 166458631 166458845 -33171305 + L1MD2 LINE L1 6149 6346 -13 186 161 0 0 chr5 166459205 166459236 -33170914 + L3 LINE CR1 1049 1079 -498 390 283 110 0 chr5 166459382 166459527 -33170623 + L3 LINE CR1 1400 1560 -17 396 0 0 0 chr5 166459603 166459647 -33170503 + (CA)n Simple_repeat Simple_repeat 2 45 0 322 236 0 100 chr5 166459924 166460034 -33170116 - L1MC4 LINE L1 -1339 6703 6605 647 245 51 23 chr5 166461086 166461180 -33168970 + L1ME4a LINE L1 5545 5635 -486 264 59 0 0 chr5 166461180 166461214 -33168936 + (TA)n Simple_repeat Simple_repeat 2 35 0 647 245 51 23 chr5 166461214 166461370 -33168780 + L1ME4a LINE L1 5635 5806 -315 1300 152 58 31 chr5 166461370 166461627 -33168523 + MER21A LTR ERV1 1 264 -667 3326 147 47 13 chr5 166461632 166462170 -33167980 + MER21A LTR ERV1 376 931 0 273 259 140 38 chr5 166462203 166462439 -33167711 + L1ME4a LINE L1 5862 6121 0 229 335 69 28 chr5 166463055 166463273 -33166877 + L2 LINE L2 2810 3036 -236 381 191 7 13 chr5 166463361 166463517 -33166633 + GA-rich Low_complexity Low_complexity 1 154 0 315 205 205 9 chr5 166463518 166463630 -33166520 + L1MCa LINE L1 1167 1300 -5126 291 157 0 0 chr5 166463630 166463681 -33166469 + GA-rich Low_complexity Low_complexity 5 55 0 23 33 0 0 chr5 166463701 166463731 -33166419 + AT_rich Low_complexity Low_complexity 1 30 0 261 281 184 35 chr5 166463794 166463908 -33166242 + L2 LINE L2 3183 3313 0 216 226 0 0 chr5 166464278 166464340 -33165810 + GA-rich Low_complexity Low_complexity 2 63 0 1991 103 3 30 chr5 166464876 166465178 -33164972 - AluSx SINE Alu -1 311 18 307 309 17 28 chr5 166465539 166465777 -33164373 + (TATG)n Simple_repeat Simple_repeat 1 235 0 351 293 0 43 chr5 166466548 166466736 -33163414 + CT-rich Low_complexity Low_complexity 1 180 0 274 222 205 26 chr5 166467212 166467329 -33162821 + L3 LINE CR1 1273 1410 -167 333 276 41 10 chr5 166467924 166468022 -33162128 + MIR SINE MIR 51 151 -57 515 272 56 41 chr5 166468228 166468423 -33161727 - MIR SINE MIR -16 246 49 883 148 43 6 chr5 166472933 166473095 -33157055 - FRAM SINE Alu -16 160 1 1111 250 53 39 chr5 166473174 166473686 -33156464 + MER113 DNA MER1_type? 3 521 0 427 240 190 23 chr5 166473952 166474173 -33155977 + L1ME4a LINE L1 5861 6118 -3 250 132 0 66 chr5 166474496 166474572 -33155578 + (TTA)n Simple_repeat Simple_repeat 1 71 0 2265 89 0 0 chr5 166474697 166474990 -33155160 - AluSx SINE Alu -19 293 1 259 295 39 0 chr5 166474991 166475069 -33155081 - MIR SINE MIR -59 203 123 488 228 0 10 chr5 166476042 166476143 -33154007 + MER103 DNA DNA 1 100 -66 367 310 37 37 chr5 166476160 166476296 -33153854 + MIR3 SINE MIR 16 154 -54 745 219 61 0 chr5 166476296 166476460 -33153690 + MER96 DNA MER1_type 1 174 -1 367 310 37 37 chr5 166476460 166476510 -33153640 + MIR3 SINE MIR 153 202 -6 601 193 17 8 chr5 166477106 166477225 -33152925 + L2 LINE L2 3151 3270 -2 305 325 95 18 chr5 166478015 166478184 -33151966 + L1ME4a LINE L1 5739 5920 -201 288 0 0 0 chr5 166478186 166478218 -33151932 + (TG)n Simple_repeat Simple_repeat 2 33 0 386 167 9 70 chr5 166478222 166478336 -33151814 + L1ME4a LINE L1 5965 6071 -50 800 183 21 0 chr5 166478346 166478488 -33151662 - FRAM SINE Alu -31 145 1 314 336 53 8 chr5 166479707 166479838 -33150312 - L2 LINE L2 -2 3311 3175 700 276 56 20 chr5 166479929 166480179 -33149971 - MIR SINE MIR -2 260 2 434 276 130 2 chr5 166480198 166480332 -33149818 - MIR SINE MIR -62 146 6 2238 95 3 0 chr5 166481567 166481872 -33148278 - AluSx SINE Alu -6 306 1 276 320 62 10 chr5 166482143 166482240 -33147910 + MIR SINE MIR 19 120 -88 337 291 55 0 chr5 166482260 166482370 -33147780 - MER117 DNA MER1_type -7 190 75 1806 158 21 63 chr5 166482730 166483109 -33147041 + MER47A DNA MER2_type 2 364 -2 984 317 101 2 chr5 166483536 166483962 -33146188 + MLT1K LTR MaLR 114 581 -7 1975 101 31 11 chr5 166484538 166484824 -33145326 + AluSx SINE Alu 3 294 -18 386 277 28 11 chr5 166485711 166485888 -33144262 + CT-rich Low_complexity Low_complexity 1 180 0 700 250 36 45 chr5 166486397 166486617 -33143533 - MIR SINE MIR -3 259 42 595 318 90 43 chr5 166487069 166487585 -33142565 - L2 LINE L2 0 3313 2777 1763 182 0 0 chr5 166487585 166487893 -33142257 - AluJb SINE Alu -4 308 1 595 318 90 43 chr5 166487893 166487951 -33142199 - L2 LINE L2 -536 2777 2723 587 271 37 88 chr5 166488661 166488989 -33141161 - MER102b DNA MER1_type -30 311 1 883 166 38 0 chr5 166489328 166489485 -33140665 - MER5A DNA MER1_type -24 165 3 261 275 14 0 chr5 166489990 166490059 -33140091 + MER103 DNA DNA 15 84 -82 253 274 151 0 chr5 166490341 166490414 -33139736 - L2 LINE L2 -1 3312 3229 415 294 84 8 chr5 166490511 166490630 -33139520 - MIR3 SINE MIR -71 137 10 231 317 40 30 chr5 166490744 166490845 -33139305 + L2 LINE L2 3188 3289 -24 322 299 0 11 chr5 166490903 166490990 -33139160 + L1MC4a LINE L1 5559 5644 -2164 2067 117 0 7 chr5 166490993 166491292 -33138858 + AluSx SINE Alu 1 297 -15 341 286 177 44 chr5 166491332 166491580 -33138570 + L1MC4a LINE L1 5766 6046 -1762 30 0 0 0 chr5 166491589 166491619 -33138531 + AT_rich Low_complexity Low_complexity 1 30 0 192 200 0 0 chr5 166491652 166491692 -33138458 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 1225 168 14 27 chr5 166495212 166495373 -33134777 + MER20 DNA MER1_type 3 162 -57 2678 113 0 0 chr5 166495373 166495737 -33134413 - THE1B LTR MaLR 0 364 1 1225 168 14 27 chr5 166495737 166495795 -33134355 + MER20 DNA MER1_type 162 219 0 843 310 8 8 chr5 166496053 166496314 -33133836 + MIR SINE MIR 2 262 0 233 240 93 78 chr5 166496309 166496438 -33133712 - MIR3 SINE MIR -69 139 9 * 291 270 38 94 chr5 166496504 166496663 -33133487 - MIR3 SINE MIR -11 197 48 891 259 217 10 chr5 166497996 166498503 -33131647 + L2 LINE L2 2694 3313 0 298 320 98 16 chr5 166498520 166498642 -33131508 - MIR3 SINE MIR -9 199 68 776 285 12 44 chr5 166498670 166498919 -33131231 + MIR SINE MIR 20 260 -2 352 277 250 7 chr5 166499363 166499511 -33130639 + MIR SINE MIR 77 260 -2 310 359 81 20 chr5 166499520 166499576 -33130574 - L3 LINE CR1 -609 968 917 2104 117 0 0 chr5 166499576 166499876 -33130274 + AluSc SINE Alu 1 300 -9 310 359 81 20 chr5 166499876 166500017 -33130133 - L3 LINE CR1 -660 917 759 557 122 67 0 chr5 166500324 166500488 -33129662 + (TAGA)n Simple_repeat Simple_repeat 3 177 0 915 239 129 75 chr5 166500836 166501292 -33128858 - L2 LINE L2 0 3313 2833 234 311 16 0 chr5 166501781 166501842 -33128308 + MER5A DNA MER1_type 78 139 -50 2172 118 0 3 chr5 166501900 166502214 -33127936 - AluSq SINE Alu 0 313 1 366 289 53 26 chr5 166502311 166502463 -33127687 + MER5B DNA MER1_type 15 170 -8 326 244 0 131 chr5 166502650 166502703 -33127447 + MIR3 SINE MIR 49 107 -101 800 207 50 0 chr5 166502703 166502882 -33127268 + MER53 DNA DNA 2 189 0 326 244 0 131 chr5 166502882 166502988 -33127162 + MIR3 SINE MIR 107 187 -21 227 186 0 0 chr5 166503603 166503646 -33126504 + (ATG)n Simple_repeat Simple_repeat 2 44 0 252 267 47 12 chr5 166503670 166503756 -33126394 - MIR SINE MIR -83 179 91 238 280 227 0 chr5 166503928 166504060 -33126090 - MER113 DNA MER1_type? 0 521 360 1884 83 90 0 chr5 166504112 166504378 -33125772 + AluSc SINE Alu 1 290 -19 260 149 53 114 chr5 166504401 166504515 -33125635 - MER113 DNA MER1_type? -283 238 132 27 29 0 0 chr5 166504517 166504551 -33125599 + AT_rich Low_complexity Low_complexity 1 34 0 256 305 198 28 chr5 166505034 166505211 -33124939 + L2 LINE L2 3107 3313 0 990 210 19 5 chr5 166505605 166505810 -33124340 + MER3 DNA MER1_type 2 209 0 446 310 81 20 chr5 166505841 166506038 -33124112 + L2 LINE L2 3090 3298 -15 207 0 0 0 chr5 166506040 166506063 -33124087 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 210 217 61 26 chr5 166507805 166507920 -33122230 + (CAGA)n Simple_repeat Simple_repeat 3 121 0 421 308 44 6 chr5 166508269 166508428 -33121722 + MIR3 SINE MIR 23 187 -21 317 243 131 19 chr5 166508975 166509082 -33121068 - MIR3 SINE MIR -9 199 81 421 234 54 27 chr5 166509613 166509724 -33120426 + L2 LINE L2 3193 3306 -7 2080 127 17 3 chr5 166510668 166510968 -33119182 + AluSx SINE Alu 1 304 -8 382 322 21 14 chr5 166510968 166511111 -33119039 + MER5A DNA MER1_type 44 187 -2 382 167 42 0 chr5 166511158 166511230 -33118920 + MER103 DNA DNA 27 101 -65 220 203 34 17 chr5 166511617 166511676 -33118474 + MIR SINE MIR 86 145 -63 2341 119 0 0 chr5 166512064 166512376 -33117774 - AluJb SINE Alu 0 312 1 425 299 68 27 chr5 166513404 166513551 -33116599 - MIR3 SINE MIR -21 187 35 399 321 8 37 chr5 166513763 166513897 -33116253 - MIR SINE MIR -55 153 24 2181 186 45 55 chr5 166514027 166514576 -33115574 + MER68 LTR ERV1 1 544 -18 184 293 17 17 chr5 166514890 166514948 -33115202 + L2 LINE L2 3215 3272 0 644 310 116 14 chr5 166514994 166515210 -33114940 - MIR SINE MIR -5 257 20 309 267 175 8 chr5 166516360 166516480 -33113670 - MIR SINE MIR -110 152 13 596 115 10 10 chr5 166517343 166517439 -33112711 + MER4A LTR ERV1 1 96 -568 2583 106 3 16 chr5 166517441 166517827 -33112323 + MER4A LTR ERV1 263 643 -21 378 0 0 0 chr5 166517890 166517932 -33112218 + (TG)n Simple_repeat Simple_repeat 1 42 0 2241 102 0 13 chr5 166517933 166518237 -33111913 - AluSg SINE Alu -10 300 1 257 289 0 0 chr5 166518903 166518955 -33111195 - MIR3 SINE MIR -48 160 109 470 277 10 72 chr5 166519694 166519889 -33110261 - L3 LINE CR1 -72 1505 1323 1303 217 48 24 chr5 166520202 166520575 -33109575 - MER113 DNA MER1_type? -41 480 99 218 217 0 0 chr5 166520614 166520660 -33109490 + MIR3 SINE MIR 154 199 -9 225 188 0 21 chr5 166520683 166520731 -33109419 + CT-rich Low_complexity Low_complexity 3 49 0 406 258 47 77 chr5 166521153 166521386 -33108764 - L3 LINE CR1 -185 1392 1167 309 316 0 0 chr5 166521469 166521545 -33108605 + MIR3 SINE MIR 97 172 -36 242 320 14 0 chr5 166522479 166522558 -33107592 - MIR SINE MIR -63 145 74 208 255 0 102 chr5 166523202 166523300 -33106850 - MIR SINE MIR -70 138 51 711 247 0 0 chr5 166523887 166524037 -33106113 + MER3 DNA MER1_type 10 159 -50 1985 143 0 29 chr5 166524140 166524455 -33105695 - AluSx SINE Alu -2 310 5 409 119 0 0 chr5 166524459 166524518 -33105632 + MER3 DNA MER1_type 146 204 -5 673 285 14 19 chr5 166524538 166524745 -33105405 + MIR SINE MIR 2 207 -55 210 360 23 0 chr5 166525261 166525347 -33104803 + MIR SINE MIR 34 121 -87 2314 98 0 16 chr5 166525533 166525851 -33104299 + AluSq SINE Alu 1 313 0 442 258 26 82 chr5 166526377 166526571 -33103579 - MER117 DNA MER1_type 0 197 15 315 345 0 0 chr5 166526581 166526665 -33103485 - MIR SINE MIR -60 148 65 234 0 0 0 chr5 166527015 166527041 -33103109 + (GGGA)n Simple_repeat Simple_repeat 1 26 0 300 261 11 43 chr5 166527549 166527641 -33102509 + MIR SINE MIR 65 153 -55 436 265 8 30 chr5 166528370 166528502 -33101648 - MIR3 SINE MIR -6 202 74 321 277 67 45 chr5 166528805 166528981 -33101169 - MIR SINE MIR -50 212 35 258 32 0 0 chr5 166529486 166529517 -33100633 + (TC)n Simple_repeat Simple_repeat 1 31 0 * 324 0 0 0 chr5 166529516 166529552 -33100598 + (CA)n Simple_repeat Simple_repeat 1 36 0 214 337 79 11 chr5 166529655 166529744 -33100406 - MIR3 SINE MIR -31 177 83 215 114 0 68 chr5 166531103 166531147 -33099003 + (TCC)n Simple_repeat Simple_repeat 1 41 0 298 325 115 6 chr5 166531263 166531420 -33098730 - MIR3 SINE MIR -8 200 27 368 256 72 24 chr5 166531746 166531871 -33098279 - MIR SINE MIR -76 186 56 2167 119 0 22 chr5 166532020 166532339 -33097811 - AluSx SINE Alu 0 312 1 461 114 91 0 chr5 166532377 166532465 -33097685 - HY1 scRNA scRNA -2 110 15 715 284 196 24 chr5 166532670 166532787 -33097363 + L2 LINE L2 2818 2913 -400 2243 122 0 0 chr5 166532787 166533083 -33097067 - AluSx SINE Alu -14 298 3 715 284 196 24 chr5 166533083 166533388 -33096762 + L2 LINE L2 2913 3313 0 563 248 9 0 chr5 166533608 166533754 -33096396 + FLAM_A SINE Alu 1 147 0 2097 130 0 10 chr5 166533754 166534055 -33096095 + AluSx SINE Alu 1 298 -14 2295 96 13 13 chr5 166534478 166534791 -33095359 + AluSq SINE Alu 1 313 0 287 206 41 72 chr5 166534903 166535000 -33095150 + MIR SINE MIR 20 113 -95 802 177 0 27 chr5 166535010 166535157 -33094993 - FLAM_C SINE Alu 0 143 1 802 279 82 16 chr5 166535203 166535447 -33094703 - MIR SINE MIR 0 262 3 643 273 216 14 chr5 166535781 166536147 -33094003 - L2 LINE L2 -1 3312 2873 210 171 0 0 chr5 166536374 166536409 -33093741 - MIR SINE MIR -141 67 33 2009 176 85 56 chr5 166536974 166537139 -33093011 - MLT1D LTR MaLR -8 497 338 2215 123 3 0 chr5 166537139 166537447 -33092703 - AluSp SINE Alu -4 309 1 2009 176 85 56 chr5 166537447 166537764 -33092386 - MLT1D LTR MaLR -167 338 1 380 302 79 0 chr5 166537764 166537890 -33092260 - MIR SINE MIR -99 163 28 198 346 223 0 chr5 166538028 166538158 -33091992 - MIR3 SINE MIR -21 187 29 2239 116 0 7 chr5 166538553 166538854 -33091296 - AluSg SINE Alu -11 299 1 266 312 54 32 chr5 166538963 166539056 -33091094 - MIR3 SINE MIR -106 102 8 915 179 39 7 chr5 166539192 166539544 -33090606 - MSTD LTR MaLR -1 395 1 299 275 0 34 chr5 166539632 166539746 -33090404 + MIR SINE MIR 86 145 -63 496 291 139 26 chr5 166539769 166539999 -33090151 + MIR SINE MIR 3 258 -4 344 276 24 16 chr5 166540095 166540222 -33089928 - MER103 DNA DNA -10 156 29 540 297 32 13 chr5 166540297 166540452 -33089698 - MIR3 SINE MIR -46 162 5 207 94 38 38 chr5 166541348 166541401 -33088749 + T-rich Low_complexity Low_complexity 1 53 0 409 70 0 0 chr5 166541420 166541477 -33088673 - U3 snRNA snRNA -160 57 1 215 345 0 24 chr5 166541536 166541620 -33088530 - MIR3 SINE MIR -46 162 81 1791 157 14 3 chr5 166541825 166542118 -33088032 + AluJo SINE Alu 1 296 -16 2180 123 3 0 chr5 166542120 166542404 -33087746 + AluSx SINE Alu 2 289 -23 330 26 0 0 chr5 166542404 166542443 -33087707 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 313 252 101 93 chr5 166542451 166542548 -33087602 + MIR3 SINE MIR 24 124 -84 2451 98 3 0 chr5 166542548 166542853 -33087297 - AluSq SINE Alu -7 306 1 313 252 101 93 chr5 166542853 166542894 -33087256 + MIR3 SINE MIR 124 163 -45 2148 142 0 0 chr5 166543788 166544099 -33086051 + AluSx SINE Alu 1 311 -1 2192 78 44 30 chr5 166544103 166544398 -33085752 + AluSc SINE Alu 1 299 -10 332 231 192 54 chr5 166544420 166544461 -33085689 + L1M4c LINE L1 1011 1045 -5339 1537 208 65 59 chr5 166544461 166544922 -33085228 + LTR37B LTR ERV1 5 468 0 332 231 192 54 chr5 166544922 166545140 -33085010 + L1M4c LINE L1 1045 1306 -5078 21 0 0 0 chr5 166545235 166545256 -33084894 + AT_rich Low_complexity Low_complexity 1 21 0 887 144 0 14 chr5 166545269 166545408 -33084742 - FLAM_C SINE Alu 0 143 7 1909 150 6 34 chr5 166545455 166545775 -33084375 - AluJb SINE Alu -1 311 1 441 266 9 26 chr5 166546070 166546183 -33083967 - L2 LINE L2 -44 3269 3159 2278 95 0 14 chr5 166546195 166546491 -33083659 - AluSg SINE Alu -18 292 1 359 231 142 0 chr5 166546951 166547085 -33083065 + MER113 DNA MER1_type? 1 153 -368 1069 264 129 16 chr5 166547126 166547576 -33082574 + LTR33 LTR ERVL 21 521 0 353 236 96 70 chr5 166547639 166547868 -33082282 + L1MC4a LINE L1 5809 6043 -1765 574 99 0 11 chr5 166547948 166548039 -33082111 - LTR23 LTR ERV1 -187 250 161 580 197 33 40 chr5 166548112 166548264 -33081886 - LTR23 LTR ERV1 -286 151 1 237 217 33 0 chr5 166548301 166548361 -33081789 + L1MC5 LINE L1 7153 7214 -747 749 157 4 187 chr5 166548436 166548671 -33081479 - 7SK RNA RNA 0 193 2 826 167 0 0 chr5 166549019 166549145 -33081005 - FRAM SINE Alu -56 120 1 199 154 0 185 chr5 166549155 166549220 -33080930 - MIR SINE MIR -154 108 56 539 235 90 30 chr5 166549758 166549924 -33080226 - MIR SINE MIR -74 188 13 969 190 0 0 chr5 166549966 166550129 -33080021 + FRAM SINE Alu 1 163 -3 989 204 145 31 chr5 166550270 166550653 -33079497 + L1ME1 LINE L1 5722 6120 -46 234 0 0 0 chr5 166550595 166550621 -33079529 + (TG)n Simple_repeat Simple_repeat 2 27 0 352 183 10 173 chr5 166550621 166550748 -33079402 + L1MA10 LINE L1 6249 6334 0 1822 171 13 16 chr5 166550753 166551058 -33079092 + AluJb SINE Alu 1 304 -8 306 0 0 0 chr5 166551060 166551094 -33079056 + (CA)n Simple_repeat Simple_repeat 2 35 0 204 267 0 0 chr5 166551491 166551536 -33078614 - L2 LINE L2 -13 3259 3215 185 309 72 31 chr5 166552637 166552734 -33077416 - MIR SINE MIR -65 143 43 419 260 147 17 chr5 166552798 166552975 -33077175 + Charlie1 DNA MER1_type 40 239 -2522 304 92 174 92 chr5 166552959 166553028 -33077122 + Charlie1 DNA MER1_type 2620 2701 -60 * 2292 104 0 10 chr5 166553028 166553326 -33076824 - AluSx SINE Alu -17 295 1 304 92 174 92 chr5 166553326 166553354 -33076796 + Charlie1 DNA MER1_type 2701 2725 -36 631 157 0 0 chr5 166553360 166553449 -33076701 + FRAM SINE Alu 34 122 -54 587 139 0 0 chr5 166553538 166553624 -33076526 + AluS SINE Alu 1 86 -226 1670 163 0 35 chr5 166553624 166553906 -33076244 + AluJb SINE Alu 37 308 -4 535 266 142 26 chr5 166553908 166554134 -33076016 - MIR SINE MIR -3 259 8 444 218 117 58 chr5 166554218 166554359 -33075791 - MIR3 SINE MIR -42 166 18 406 200 0 0 chr5 166555163 166555238 -33074912 + L1MC5 LINE L1 7724 7798 -163 236 118 0 0 chr5 166555239 166555273 -33074877 + L1MC5 LINE L1 7751 7784 -177 1691 204 19 19 chr5 166555557 166555895 -33074255 + L1MB5 LINE L1 5790 6130 -44 836 101 78 0 chr5 166555895 166556024 -33074126 - MER85 DNA T2_type 0 139 1 1691 204 19 19 chr5 166556024 166556062 -33074088 + L1MB5 LINE L1 6129 6166 -8 209 349 136 8 chr5 166556499 166556631 -33073519 - MIR3 SINE MIR -22 186 38 318 267 30 10 chr5 166556891 166556992 -33073158 + MIR SINE MIR 30 132 -76 899 236 0 0 chr5 166557383 166557540 -33072610 + FAM SINE Alu 1 157 -18 559 211 0 3 chr5 166558174 166558333 -33071817 - MER58C DNA MER1_type 0 215 18 2083 139 0 0 chr5 166558354 166558641 -33071509 - AluSx SINE Alu -25 287 1 1798 174 4 0 chr5 166558877 166559192 -33070958 - AluJo SINE Alu 0 316 1 2138 119 7 13 chr5 166559194 166559496 -33070654 - AluSx SINE Alu -12 300 1 683 299 34 17 chr5 166559504 166559802 -33070348 - L1ME LINE L1 -302 5819 5517 303 264 11 98 chr5 166559850 166560024 -33070126 + MIR3 SINE MIR 50 208 0 2184 110 3 0 chr5 166560187 166560492 -33069658 + AluSx SINE Alu 1 306 0 1007 126 44 60 chr5 166560504 166560686 -33069464 + AluJo SINE Alu 85 263 -49 2310 101 3 0 chr5 166560811 166561109 -33069041 + AluSp SINE Alu 1 299 -14 1176 74 11 58 chr5 166561109 166561298 -33068852 + AluSq SINE Alu 134 313 0 226 184 20 0 chr5 166561477 166561526 -33068624 + MIR SINE MIR 70 119 -89 344 258 35 25 chr5 166561729 166561848 -33068302 + MIR3 SINE MIR 43 163 -45 1362 134 202 24 chr5 166561883 166562136 -33068014 + AluSg1 SINE Alu 1 298 -11 25 0 0 0 chr5 166562154 166562179 -33067971 + AT_rich Low_complexity Low_complexity 1 25 0 1911 160 0 19 chr5 166562242 166562560 -33067590 - AluJb SINE Alu 0 312 1 2335 88 3 0 chr5 166562592 166562887 -33067263 + AluSp SINE Alu 11 306 -7 578 291 0 48 chr5 166563004 166563214 -33066936 + MIR SINE MIR 57 256 -6 263 254 154 0 chr5 166563530 166563640 -33066510 + MIR SINE MIR 110 236 -26 202 247 113 21 chr5 166563847 166563944 -33066206 - MER5A DNA MER1_type -76 113 8 420 263 53 0 chr5 166564088 166564202 -33065948 + L2 LINE L2 3194 3313 0 382 266 53 9 chr5 166564303 166564416 -33065734 + MIR SINE MIR 32 149 -113 2428 202 43 30 chr5 166564468 166564998 -33065152 + MLT1F LTR MaLR 6 542 0 233 347 50 8 chr5 166565266 166565387 -33064763 - MER5A DNA MER1_type -6 183 58 478 260 149 0 chr5 166565749 166565903 -33064247 + MER5A DNA MER1_type 6 182 -7 1432 148 0 19 chr5 166565934 166566150 -33064000 + AluSq SINE Alu 1 212 -101 229 164 0 115 chr5 166566150 166566211 -33063939 + FLAM_A SINE Alu 77 130 -3 2356 89 3 3 chr5 166566310 166566613 -33063537 + AluSc SINE Alu 1 303 -6 535 219 0 18 chr5 166566649 166566763 -33063387 + MER58B DNA MER1_type 230 341 0 222 297 123 33 chr5 166566849 166567061 -33063089 - MIR SINE MIR -1 261 31 2299 98 0 7 chr5 166567543 166567849 -33062301 - AluSg SINE Alu -6 304 1 300 318 101 0 chr5 166567849 166567978 -33062172 - MIR SINE MIR -108 154 13 197 24 95 0 chr5 166568021 166568063 -33062087 + CT-rich Low_complexity Low_complexity 5 50 0 2142 118 0 23 chr5 166568075 166568381 -33061769 - AluJb SINE Alu -13 299 1 473 292 75 31 chr5 166568426 166568652 -33061498 - MIR SINE MIR -6 256 21 413 220 101 9 chr5 166570756 166570865 -33059285 - MLT1B LTR MaLR -267 123 5 660 267 48 19 chr5 166570886 166571002 -33059148 + MIR SINE MIR 36 162 -100 544 224 64 0 chr5 166571002 166571127 -33059023 + MER94 DNA DNA 1 133 -1 660 267 48 19 chr5 166571127 166571220 -33058930 + MIR SINE MIR 162 251 -11 235 163 41 0 chr5 166571911 166571960 -33058190 - L1ME LINE L1 -208 5913 5863 1986 168 0 0 chr5 166571976 166572279 -33057871 + AluJb SINE Alu 1 303 -9 2240 92 0 41 chr5 166572308 166572623 -33057527 - AluSg SINE Alu 0 310 9 263 330 21 0 chr5 166573074 166573171 -33056979 + Charlie8 DNA MER1_type 1 99 -2318 649 133 0 0 chr5 166573179 166573284 -33056866 + L1MB3 LINE L1 6077 6181 -2 1140 177 73 0 chr5 166573286 166573478 -33056672 + AluJo SINE Alu 5 210 -102 1684 144 45 17 chr5 166573674 166573965 -33056185 - AluJo SINE Alu -13 299 1 2296 81 3 0 chr5 166573990 166574274 -33055876 + AluSq SINE Alu 1 285 -28 488 267 31 87 chr5 166574469 166574664 -33055486 - MLT1I LTR MaLR -9 400 217 * 941 173 25 51 chr5 166574659 166574856 -33055294 + MLT1A1 LTR MaLR 6 197 -168 263 269 26 0 chr5 166575049 166575127 -33055023 + MIR SINE MIR 102 181 -81 2027 135 0 56 chr5 166575139 166575458 -33054692 - AluSx SINE Alu -9 303 3 2322 113 0 0 chr5 166575655 166575956 -33054194 - AluSg SINE Alu -9 301 1 33 25 0 0 chr5 166576046 166576086 -33054064 + AT_rich Low_complexity Low_complexity 1 40 0 688 285 103 48 chr5 166576102 166576453 -33053697 - L1MD2 LINE L1 -302 5819 5470 670 124 0 0 chr5 166577053 166577158 -33052992 + L1MB3 LINE L1 6077 6181 -2 199 241 19 19 chr5 166577989 166578043 -33052107 + MIR SINE MIR 91 144 -118 2127 111 10 13 chr5 166578063 166578361 -33051789 - AluSx SINE Alu -15 297 1 454 258 170 0 chr5 166578436 166578618 -33051532 + MIR SINE MIR 47 259 -3 450 224 200 24 chr5 166578884 166579089 -33051061 + MIR SINE MIR 2 242 -20 30 0 0 0 chr5 166579201 166579231 -33050919 + AT_rich Low_complexity Low_complexity 1 30 0 1990 119 41 14 chr5 166579231 166579524 -33050626 - AluSx SINE Alu -11 301 1 1893 173 0 0 chr5 166579633 166579928 -33050222 + AluJo SINE Alu 1 295 -17 1638 185 38 0 chr5 166580101 166580388 -33049762 + AluJo SINE Alu 1 298 -14 573 267 32 53 chr5 166580614 166580861 -33049289 - L1MC4a LINE L1 -1873 5935 5694 284 307 123 43 chr5 166581021 166581233 -33048917 - L1MC4a LINE L1 -2000 5808 5567 2402 63 0 10 chr5 166581233 166581534 -33048616 + AluSx SINE Alu 2 299 -13 284 307 123 43 chr5 166581534 166581598 -33048552 - L1MC4a LINE L1 -2241 5567 5510 21 71 0 0 chr5 166583572 166583614 -33046536 + GC_rich Low_complexity Low_complexity 1 42 0 1235 174 157 7 chr5 166587144 166587425 -33042725 - L1MD3 LINE L1 -19 7976 7654 576 149 182 19 chr5 166587431 166587585 -33042565 - L1MD3 LINE L1 -382 7613 7435 585 190 19 17 chr5 166587595 166587722 -33042428 - MLT1F1 LTR MaLR -446 121 5 875 209 127 8 chr5 166587728 166587987 -33042163 - L1MD3 LINE L1 -729 7266 6977 30 27 0 0 chr5 166587999 166588036 -33042114 + AT_rich Low_complexity Low_complexity 1 37 0 620 151 11 0 chr5 166588036 166588129 -33042021 - AluJ/FLAM SINE Alu -212 100 7 599 227 54 22 chr5 166588138 166588323 -33041827 - L1MD3 LINE L1 -1020 6975 6785 296 225 50 0 chr5 166588788 166588868 -33041282 - L1MA10 LINE L1 0 6334 6251 737 146 39 31 chr5 166588873 166589003 -33041147 + FRAM SINE Alu 23 153 -23 397 219 37 45 chr5 166589005 166589199 -33040951 - L1MA10 LINE L1 -81 6244 5891 * 1929 198 86 35 chr5 166589192 166589716 -33040434 - L1ME LINE L1 -347 5819 5280 2192 100 0 0 chr5 166589716 166589996 -33040154 - AluSq SINE Alu -18 295 16 1929 198 86 35 chr5 166589996 166590044 -33040106 - L1ME LINE L1 -886 5280 5236 1799 119 36 0 chr5 166590170 166590421 -33039729 + AluSx SINE Alu 35 294 -18 1267 191 96 58 chr5 166590437 166590886 -33039264 - L1ME LINE L1 -900 5246 4781 423 232 42 0 chr5 166591042 166591137 -33039013 - MER94 DNA DNA 0 134 36 371 276 105 60 chr5 166591167 166591681 -33038469 - L1ME LINE L1 -363 5799 5263 1942 114 4 11 chr5 166591892 166592173 -33037977 - AluY SINE Alu -32 279 1 3995 141 45 26 chr5 166592310 166593040 -33037110 + Tigger2 DNA MER2_type 1 744 -1974 873 181 157 0 chr5 166593105 166593309 -33036841 + Tigger2 DNA MER2_type 2483 2718 0 274 272 37 0 chr5 166593546 166593627 -33036523 - MIR SINE MIR -109 153 70 2391 88 0 3 chr5 166594211 166594517 -33035633 - AluSg SINE Alu -5 305 1 1705 135 67 4 chr5 166594771 166595038 -33035112 - AluSx SINE Alu -15 297 14 2171 108 0 7 chr5 166595127 166595422 -33034728 - AluSc SINE Alu -16 293 1 30 0 0 0 chr5 166595425 166595455 -33034695 + AT_rich Low_complexity Low_complexity 1 30 0 1096 186 4 44 chr5 166595463 166595689 -33034461 - AluJo SINE Alu -19 293 77 468 95 0 0 chr5 166596449 166596512 -33033638 - Alu SINE Alu -254 64 2 2121 103 17 0 chr5 166597374 166597665 -33032485 + AluSg SINE Alu 3 298 -12 2012 120 0 52 chr5 166598211 166598519 -33031631 - AluSx SINE Alu -20 292 1 291 54 0 0 chr5 166599224 166599261 -33030889 + (TG)n Simple_repeat Simple_repeat 1 37 0 1540 151 46 0 chr5 166599288 166599527 -33030623 - AluJo SINE Alu -46 266 17 1187 181 9 125 chr5 166599731 166599900 -33030250 - AluJb SINE Alu -3 299 187 405 0 0 0 chr5 166599900 166599945 -33030205 + (TG)n Simple_repeat Simple_repeat 2 46 0 1187 181 9 125 chr5 166599945 166600112 -33030038 - AluJb SINE Alu -115 187 2 1424 126 14 0 chr5 166600114 166600321 -33029829 - AluSp SINE Alu -18 295 86 1027 167 21 16 chr5 166600962 166601148 -33029002 + AluJo SINE Alu 1 187 -125 281 59 176 0 chr5 166601149 166601200 -33028950 + AluSp/q SINE Alu 240 299 -4 624 118 0 0 chr5 166601231 166601316 -33028834 + AluJ/FRAM SINE Alu 214 298 -14 189 0 0 0 chr5 166601929 166601950 -33028200 + (TTA)n Simple_repeat Simple_repeat 2 22 0 346 236 75 0 chr5 166602219 166602325 -33027825 - L1MC4 LINE L1 -15 8027 7914 845 229 116 27 chr5 166602326 166602618 -33027532 - L1MC4 LINE L1 -196 7846 7529 1909 158 10 0 chr5 166602720 166603023 -33027127 - AluSx SINE Alu -6 306 1 443 166 47 60 chr5 166603066 166603192 -33026958 - L1MC4 LINE L1 -974 6898 6718 1401 184 19 55 chr5 166603673 166603983 -33026167 - AluJo SINE Alu -13 299 1 2062 132 0 0 chr5 166604186 166604473 -33025677 - AluSx SINE Alu -21 291 5 774 162 62 124 chr5 166604639 166604780 -33025370 - MER20 DNA MER1_type -6 213 88 1459 173 13 63 chr5 166604780 166605081 -33025069 + AluJb SINE Alu 1 286 -26 774 162 62 124 chr5 166605081 166605149 -33025001 - MER20 DNA MER1_type -131 88 17 1322 221 160 15 chr5 166605445 166605838 -33024312 - LTR40b LTR ERVL -10 452 3 210 259 0 17 chr5 166605959 166606017 -33024133 - MIR SINE MIR -160 102 46 2477 66 3 7 chr5 166606062 166606366 -33023784 + AluY SINE Alu 1 303 -8 279 265 88 83 chr5 166607208 166607331 -33022819 + MER5A DNA MER1_type 2 128 -61 2077 121 3 0 chr5 166607331 166607621 -33022529 - AluSx SINE Alu -8 304 14 279 265 88 83 chr5 166607621 166607678 -33022472 + MER5A DNA MER1_type 128 183 -6 506 143 38 219 chr5 166607702 166607967 -33022183 - L1MB2 LINE L1 -9 6162 5982 207 344 86 23 chr5 166609107 166609235 -33020915 - L2 LINE L2 0 3313 3178 985 190 6 0 chr5 166609263 166609426 -33020724 + AluJb SINE Alu 129 292 -20 313 306 177 16 chr5 166609467 166609715 -33020435 - L2 LINE L2 -677 2637 2350 1729 180 14 3 chr5 166609749 166610038 -33020112 + AluJo SINE Alu 1 292 -20 1797 176 3 7 chr5 166610469 166610764 -33019386 + AluJb SINE Alu 1 294 -18 22 35 0 0 chr5 166611139 166611168 -33018982 + AT_rich Low_complexity Low_complexity 1 29 0 1048 139 123 81 chr5 166611459 166611768 -33018382 - MER33 DNA MER1_type -1 323 2 23 0 0 0 chr5 166611957 166611980 -33018170 + AT_rich Low_complexity Low_complexity 1 23 0 308 292 35 0 chr5 166612282 166612395 -33017755 - MER94 DNA DNA -17 117 1 828 189 94 14 chr5 166612577 166612789 -33017361 - L1MB5 LINE L1 0 6174 5946 2170 135 0 6 chr5 166612871 166613183 -33016967 - AluSx SINE Alu -2 310 1 522 261 112 19 chr5 166613554 166613715 -33016435 + MIR SINE MIR 31 206 -56 1942 46 46 31 chr5 166613718 166613979 -33016171 + AluY SINE Alu 1 265 -46 1164 68 0 7 chr5 166614083 166614250 -33015900 + AluY SINE Alu 139 304 0 733 119 0 0 chr5 166614584 166614693 -33015457 - AluSg/x SINE Alu -5 305 197 294 119 34 34 chr5 166614693 166614752 -33015398 + AluSp/q SINE Alu 244 302 -1 2175 114 0 10 chr5 166614790 166615088 -33015062 - AluSg SINE Alu -15 295 1 577 215 66 0 chr5 166617796 166617917 -33012233 - FLAM_A SINE Alu -4 129 1 214 308 42 42 chr5 166618188 166618308 -33011842 - MIR SINE MIR -75 187 68 21 0 0 0 chr5 166618609 166618630 -33011520 + AT_rich Low_complexity Low_complexity 1 21 0 1868 166 3 7 chr5 166619891 166620199 -33009951 + AluJo SINE Alu 5 311 -1 230 350 98 24 chr5 166621152 166621275 -33008875 + L2 LINE L2 3097 3228 -44 240 213 222 9 chr5 166621595 166621703 -33008447 + L2 LINE L2 2397 2527 -787 197 298 53 32 chr5 166621744 166621838 -33008312 + L2 LINE L2 2633 2728 -586 368 231 259 0 chr5 166621848 166621956 -33008194 + L2 LINE L2 3137 3272 0 2329 99 0 10 chr5 166624038 166624342 -33005808 + AluSq SINE Alu 1 301 -12 244 382 38 8 chr5 166625576 166625707 -33004443 + MIR3 SINE MIR 39 173 -35 2220 96 0 10 chr5 166726693 166727030 -32903120 - AluSq SINE Alu 0 313 1 1819 158 6 40 chr5 166727033 166727222 -32902928 - AluJb SINE Alu 0 312 137 2164 107 0 3 chr5 166727222 166727521 -32902629 - AluSx SINE Alu -14 298 1 1819 158 6 40 chr5 166727521 166727654 -32902496 - AluJb SINE Alu -175 137 1 408 214 45 0 chr5 166727658 166727747 -32902403 + L2 LINE L2 3221 3313 0 844 222 7 44 chr5 166727955 166728224 -32901926 - L2 LINE L2 -285 3028 2770 2555 42 0 0 chr5 166728233 166728540 -32901610 - AluY SINE Alu -4 307 1 2029 133 3 3 chr5 166728551 166728859 -32901291 - AluSg SINE Alu 0 310 3 1816 129 0 73 chr5 166729575 166729742 -32900408 - AluJo SINE Alu -18 294 116 216 0 0 0 chr5 166729742 166729766 -32900384 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1675 86 147 0 chr5 166729766 166730011 -32900139 - AluSg SINE Alu -29 281 1 1816 129 0 73 chr5 166730011 166730159 -32899991 - AluJo SINE Alu -194 118 1 361 326 125 14 chr5 166730165 166730570 -32899580 + L2 LINE L2 2696 3149 -164 192 306 0 0 chr5 166730638 166730687 -32899463 + L2 LINE L2 3262 3310 -3 766 151 0 0 chr5 166731053 166731172 -32898978 + AluJo/FLAM SINE Alu 1 119 -193 1659 67 0 0 chr5 166731172 166731382 -32898768 - AluY SINE Alu -16 295 86 1005 221 22 8 chr5 166731472 166731825 -32898325 - L2 LINE L2 -268 3045 2694 249 289 0 48 chr5 166731972 166732055 -32898095 - MIR SINE MIR -86 122 44 1727 143 13 39 chr5 166732140 166732447 -32897703 - AluJo SINE Alu -13 299 1 2111 96 28 0 chr5 166732456 166732747 -32897403 - AluSx SINE Alu -13 299 1 1144 173 0 5 chr5 166733202 166733377 -32896773 - AluJo SINE Alu -4 308 133 1612 150 10 49 chr5 166733377 166733684 -32896466 - AluJo SINE Alu -17 295 1 1144 173 0 5 chr5 166733684 166733705 -32896445 - AluJo SINE Alu -179 133 113 1732 126 0 0 chr5 166734145 166734376 -32895774 - AluSx SINE Alu -81 231 1 218 326 41 109 chr5 166734540 166734761 -32895389 + MIR SINE MIR 38 243 -19 1805 114 12 0 chr5 166734772 166735026 -32895124 - AluSx SINE Alu -17 295 39 306 300 63 58 chr5 166735027 166735217 -32894933 + L2 LINE L2 3122 3312 -1 315 234 64 11 chr5 166735217 166735311 -32894839 - MIR3 SINE MIR -29 179 81 464 142 123 123 chr5 166735320 166735442 -32894708 - MER58C DNA MER1_type -2214 206 85 2143 90 0 0 chr5 166735442 166735720 -32894430 + AluSg SINE Alu 1 278 -32 522 0 0 0 chr5 166735720 166735778 -32894372 + (TAAAA)n Simple_repeat Simple_repeat 1 58 0 464 142 123 123 chr5 166735778 166735816 -32894334 - MER58C DNA MER1_type -2333 87 45 2206 113 0 0 chr5 166735956 166736267 -32893883 - AluSx SINE Alu -1 311 1 1685 135 0 38 chr5 166736283 166736550 -32893600 - AluSx SINE Alu -55 257 1 310 248 24 56 chr5 166736617 166736742 -32893408 - MIR SINE MIR -55 153 33 1681 174 0 20 chr5 166737002 166737306 -32892844 + AluJo SINE Alu 1 298 -14 367 212 46 24 chr5 166737313 166737448 -32892702 - MER106A DNA MER1_type -21 215 110 250 234 32 39 chr5 166737448 166737602 -32892548 + (TA)n Simple_repeat Simple_repeat 2 154 0 2164 74 7 11 chr5 166737639 166737946 -32892204 - AluSp SINE Alu 0 310 5 709 134 0 99 chr5 166737977 166738014 -32892136 + AluJo/FLAM SINE Alu 1 40 -262 2444 44 0 7 chr5 166738014 166738312 -32891838 - AluY SINE Alu -15 296 1 709 134 0 99 chr5 166738312 166738416 -32891734 + AluJo/FLAM SINE Alu 40 128 -174 2451 46 0 40 chr5 166738741 166739065 -32891085 - AluY SINE Alu 0 311 1 572 251 37 31 chr5 166739092 166739217 -32890933 + MER3 DNA MER1_type 8 136 -73 2001 150 7 0 chr5 166739217 166739524 -32890626 - AluJb SINE Alu -3 309 1 572 251 37 31 chr5 166739524 166739589 -32890561 + MER3 DNA MER1_type 136 199 -10 1977 143 3 0 chr5 166739697 166739997 -32890153 + AluSq SINE Alu 1 301 -12 1812 166 27 22 chr5 166740019 166740386 -32889764 + L1MB3 LINE L1 5813 6181 -2 971 182 0 0 chr5 166740452 166740611 -32889539 + AluJb SINE Alu 134 292 -20 1714 122 3 98 chr5 166740614 166740941 -32889209 + AluY SINE Alu 1 296 -15 810 195 27 0 chr5 166740979 166741164 -32888986 + L1M4 LINE L1 3968 4157 -1989 1824 188 0 0 chr5 166741166 166741470 -32888680 + AluJo SINE Alu 1 304 -8 1116 121 36 90 chr5 166741471 166741728 -32888422 + AluSg/x SINE Alu 86 312 0 2078 103 7 3 chr5 166741858 166742150 -32888000 - AluSx SINE Alu -19 293 1 275 266 32 32 chr5 166742154 166742248 -32887902 - MIR SINE MIR -57 205 112 185 188 0 0 chr5 166742311 166742343 -32887807 + L2 LINE L2 3266 3297 -16 1890 110 46 25 chr5 166742912 166743059 -32887091 - AluJb SINE Alu -19 293 151 2249 79 3 13 chr5 166743059 166743362 -32886788 - AluSp SINE Alu -11 302 3 1890 110 46 25 chr5 166743362 166743496 -32886654 - AluJb SINE Alu -161 151 6 262 286 40 48 chr5 166743509 166743563 -32886587 - MIR3 SINE MIR -51 157 104 2519 44 0 0 chr5 166743563 166743859 -32886291 + AluY SINE Alu 1 296 -15 262 286 40 48 chr5 166743859 166743930 -32886220 - MIR3 SINE MIR -104 104 33 2261 100 0 3 chr5 166744042 166744351 -32885799 + AluSx SINE Alu 1 308 -4 288 328 47 8 chr5 166744406 166744534 -32885616 - MIR SINE MIR -50 212 80 381 239 23 0 chr5 166745033 166745121 -32885029 + MIR SINE MIR 107 196 -66 2039 113 0 3 chr5 166745125 166745455 -32884695 - AluSx SINE Alu 0 329 1 275 185 0 0 chr5 166745485 166745539 -32884611 - FLAM_A SINE Alu -7 126 73 1893 111 0 22 chr5 166745540 166745810 -32884340 - AluSx SINE Alu -48 264 1 470 238 71 24 chr5 166745814 166745940 -32884210 - MIR SINE MIR -117 145 14 408 279 96 15 chr5 166746367 166746503 -32883647 - MIR3 SINE MIR -39 169 23 2360 92 0 6 chr5 166746573 166746887 -32883263 - AluSx SINE Alu 0 312 1 1734 153 3 56 chr5 166746887 166747050 -32883100 - AluJo SINE Alu -17 295 153 2465 77 0 0 chr5 166747050 166747360 -32882790 - AluSg SINE Alu 0 310 1 1734 153 3 56 chr5 166747360 166747506 -32882644 - AluJo SINE Alu -159 153 1 1206 289 40 30 chr5 166747579 166748051 -32882099 + L2 LINE L2 2602 3082 -231 2365 80 0 0 chr5 166748051 166748353 -32881797 - AluY SINE Alu -9 302 1 1206 289 40 30 chr5 166748353 166748583 -32881567 + L2 LINE L2 3082 3308 -5 251 219 18 26 chr5 166748640 166748674 -32881476 + GA-rich Low_complexity Low_complexity 1 34 -79 2119 88 50 0 chr5 166748674 166748971 -32881179 + AluSx SINE Alu 1 312 0 251 219 18 26 chr5 166748971 166749015 -32881135 + GA-rich Low_complexity Low_complexity 34 77 -36 2335 105 0 3 chr5 166749015 166749329 -32880821 + AluSp SINE Alu 1 313 0 1493 98 184 23 chr5 166749338 166749594 -32880556 + AluSg SINE Alu 1 297 -3 251 219 18 26 chr5 166749594 166749618 -32880532 + GA-rich Low_complexity Low_complexity 85 113 0 1014 99 0 0 chr5 166750130 166750261 -32879889 + FLAM_C SINE Alu 1 131 -2 342 0 0 0 chr5 166750264 166750302 -32879848 + (CA)n Simple_repeat Simple_repeat 2 39 0 419 86 0 57 chr5 166750306 166750376 -32879774 + FLAM_C SINE Alu 70 135 -8 378 0 0 0 chr5 166750381 166750423 -32879727 + (CA)n Simple_repeat Simple_repeat 2 43 0 1933 134 0 39 chr5 166750424 166750731 -32879419 + AluJo SINE Alu 1 295 -17 309 283 116 14 chr5 166750859 166750997 -32879153 + L2 LINE L2 2827 2978 -335 207 296 99 0 chr5 166751028 166751099 -32879051 - MIR SINE MIR -6 256 179 886 204 32 61 chr5 166751258 166751390 -32878760 - L1MB7 LINE L1 -2 6172 6038 1871 119 0 4 chr5 166751390 166751651 -32878499 - AluSq SINE Alu -53 260 1 886 204 32 61 chr5 166751651 166751791 -32878359 - L1MB7 LINE L1 -136 6038 5927 2177 111 0 0 chr5 166751791 166752089 -32878061 + AluSg SINE Alu 13 310 0 886 204 32 61 chr5 166752089 166752185 -32877965 - L1MB7 LINE L1 -247 5927 5830 402 192 0 0 chr5 166752192 166752270 -32877880 - AluS SINE Alu 0 310 233 1344 75 27 32 chr5 166752270 166752457 -32877693 - AluSq SINE Alu -127 186 1 2150 135 0 0 chr5 166752485 166752796 -32877354 - AluJb SINE Alu -1 311 1 872 159 0 0 chr5 166752798 166752930 -32877220 - AluJo/FLAM SINE Alu -169 133 2 524 196 35 14 chr5 166752931 166753074 -32877076 - L1MB7 LINE L1 -353 5821 5676 354 316 60 30 chr5 166753095 166753228 -32876922 + L2 LINE L2 3136 3272 0 226 262 36 48 chr5 166753257 166753341 -32876809 + MIR SINE MIR 63 145 -63 337 305 103 23 chr5 166753442 166753616 -32876534 - L2 LINE L2 -7 3306 3119 391 241 60 38 chr5 166753650 166753783 -32876367 - MIR SINE MIR -81 181 46 2296 57 13 13 chr5 166753796 166754097 -32876053 - AluY SINE Alu -10 301 1 1892 146 0 0 chr5 166754104 166754392 -32875758 - AluJo SINE Alu -24 288 1 327 215 151 0 chr5 166755819 166755912 -32874238 + MIR SINE MIR 80 186 -76 211 393 41 0 chr5 166755929 166756051 -32874099 + MIR3 SINE MIR 38 164 -44 2204 77 0 3 chr5 166756937 166757255 -32872895 - AluSp SINE Alu 0 317 1 1558 152 7 69 chr5 166757261 166757591 -32872559 - AluJb SINE Alu 0 311 1 2247 104 3 0 chr5 166757593 166757902 -32872248 - AluSx SINE Alu -2 310 1 586 238 0 77 chr5 166757922 166758090 -32872060 + MIR SINE MIR 2 156 -106 2441 47 0 3 chr5 166758213 166758510 -32871640 + AluY SINE Alu 1 296 -15 500 129 35 0 chr5 166758701 166758786 -32871364 + AluY SINE Alu 217 304 -7 2011 94 38 56 chr5 166758804 166759123 -32871027 - AluSq SINE Alu 0 313 1 416 343 54 0 chr5 166759166 166759332 -32870818 + L1M4 LINE L1 2931 3105 -3041 229 300 0 0 chr5 166759492 166759552 -32870598 - L3 LINE CR1 -99 1478 1419 2626 45 0 0 chr5 166759553 166759864 -32870286 - AluY SINE Alu 0 311 1 449 354 31 26 chr5 166759896 166760122 -32870028 - L2 LINE L2 -31 3241 3015 331 242 31 3 chr5 166760120 166760239 -32869911 + MIR SINE MIR 31 153 -55 * 1126 176 5 14 chr5 166760270 166760491 -32869659 + AluJo SINE Alu 94 312 0 2182 62 11 0 chr5 166760503 166760776 -32869374 + AluSq SINE Alu 14 289 -24 2514 40 7 0 chr5 166760817 166761115 -32869035 - AluY SINE Alu -11 300 1 631 233 51 0 chr5 166761305 166761481 -32868669 - MER20 DNA MER1_type -18 201 17 1655 105 4 16 chr5 166761557 166761804 -32868346 - AluSx SINE Alu -14 298 55 1146 67 7 0 chr5 166761804 166761948 -32868202 - AluSq/x SINE Alu -167 145 1 216 0 0 0 chr5 166761950 166761974 -32868176 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1434 154 85 0 chr5 166761978 166762237 -32867913 - AluJo SINE Alu -31 281 1 297 329 28 8 chr5 166762266 166762431 -32867719 - MIR SINE MIR -62 146 22 204 254 233 19 chr5 166762494 166762619 -32867531 - MIR SINE MIR -61 147 41 2137 114 0 20 chr5 166763508 166763814 -32866336 - AluSx SINE Alu -12 300 1 356 356 8 0 chr5 166763854 166764019 -32866131 + MIR SINE MIR 25 189 -63 887 211 54 15 chr5 166764048 166764252 -32865898 + MER20 DNA MER1_type 5 216 -3 1928 125 44 7 chr5 166764279 166764576 -32865574 + AluJo SINE Alu 1 308 -4 644 282 84 0 chr5 166764797 166764999 -32865151 + MER20 DNA MER1_type 1 219 0 244 225 26 40 chr5 166765947 166766098 -32864052 + (CATG)n Simple_repeat Simple_repeat 2 150 0 446 378 0 0 chr5 166766103 166766267 -32863883 + (CA)n Simple_repeat Simple_repeat 1 164 0 261 265 0 0 chr5 166766287 166766370 -32863780 + (CA)n Simple_repeat Simple_repeat 1 83 0 577 266 57 0 chr5 166767031 166767208 -32862942 + MER20 DNA MER1_type 33 219 0 693 218 68 5 chr5 166767437 166767643 -32862507 + MER20 DNA MER1_type 1 219 0 206 325 24 12 chr5 166767748 166767831 -32862319 - MER5A DNA MER1_type -45 144 61 1735 146 23 0 chr5 166767877 166768138 -32862012 + AluJo SINE Alu 1 267 -45 2406 76 0 0 chr5 166768144 166768448 -32861702 + AluSx SINE Alu 1 304 -8 1020 121 0 38 chr5 166769010 166769198 -32860952 - AluSp SINE Alu 0 316 135 2186 109 0 0 chr5 166769206 166769500 -32860650 - AluSx SINE Alu -18 294 1 260 333 15 30 chr5 166769863 166769995 -32860155 + MIR SINE MIR 16 145 -63 2348 91 0 0 chr5 166770605 166770903 -32859247 + AluSx SINE Alu 1 298 -14 2132 115 0 0 chr5 166770903 166771190 -32858960 + AluSg SINE Alu 1 288 -22 2376 59 0 0 chr5 166771202 166771489 -32858661 + AluY SINE Alu 12 298 -13 476 97 0 0 chr5 166771501 166771563 -32858587 + Alu SINE Alu 1 62 -248 258 356 23 0 chr5 166871601 166871688 -32758462 - MIR SINE MIR -77 131 43 1453 176 63 30 chr5 166872006 166872369 -32757781 + MER113 DNA MER1_type? 29 403 -118 248 257 28 9 chr5 166873133 166873242 -32756908 + (TATG)n Simple_repeat Simple_repeat 4 114 0 482 211 65 41 chr5 166873419 166873542 -32756608 + MIR3 SINE MIR 81 206 -2 221 254 32 103 chr5 166874189 166874315 -32755835 - L2 LINE L2 -212 3060 2944 728 292 73 43 chr5 166874664 166874908 -32755242 + L1MC/D LINE L1 4358 4593 -1553 2591 49 0 13 chr5 166874908 166875215 -32754935 - AluY SINE Alu -8 303 1 728 292 73 43 chr5 166875215 166875625 -32754525 + L1MC/D LINE L1 4593 5032 -1114 902 264 93 48 chr5 166875646 166876067 -32754083 + L1MC/D LINE L1 5375 5814 -1994 21 36 0 0 chr5 166876097 166876125 -32754025 + AT_rich Low_complexity Low_complexity 1 28 0 2261 92 7 23 chr5 166876730 166877034 -32753116 + AluSx SINE Alu 1 299 -13 815 162 0 7 chr5 166877164 166877306 -32752844 - L1PA16 LINE L1 0 6166 6026 322 238 220 33 chr5 166877320 166877534 -32752616 + L3 LINE CR1 1095 1348 -229 676 207 9 3 chr5 166877604 166877744 -32752406 + L1PA16 LINE L1 6007 6146 -16 312 297 81 9 chr5 166877744 166877855 -32752295 + L3 LINE CR1 1422 1540 -37 * 623 278 160 27 chr5 166877853 166878184 -32751966 - L2 LINE L2 -9 3304 2930 348 366 27 14 chr5 166878188 166878409 -32751741 - L2 LINE L2 -561 2753 2530 1629 190 0 11 chr5 166878547 166878826 -32751324 - AluJo SINE Alu -36 276 1 706 101 0 0 chr5 166878956 166879045 -32751105 - 5S rRNA rRNA -32 89 1 496 286 25 4 chr5 166879185 166879326 -32750824 + MIR SINE MIR 15 155 -53 195 211 28 70 chr5 166879681 166879752 -32750398 - L2 LINE L2 -567 2747 2680 268 259 141 0 chr5 166879995 166880080 -32750070 + MLT1I LTR MaLR 47 143 -266 2017 175 51 3 chr5 166880109 166880284 -32749866 + MLT1B LTR MaLR 1 166 -224 210 37 0 0 chr5 166880284 166880311 -32749839 + (TC)n Simple_repeat Simple_repeat 2 28 0 2017 175 51 3 chr5 166880311 166880507 -32749643 + MLT1B LTR MaLR 166 390 0 322 238 78 58 chr5 166880583 166880722 -32749428 + MLT1I LTR MaLR 284 396 -13 263 50 33 50 chr5 166880830 166880890 -32749260 + (CAAAAA)n Simple_repeat Simple_repeat 2 60 0 2136 122 80 21 chr5 166880920 166881257 -32748893 + THE1B LTR MaLR 8 364 0 12391 87 7 28 chr5 166881257 166882685 -32747465 + THE1B-int LTR MaLR 1 1393 -187 2017 122 12 40 chr5 166882685 166883006 -32747144 - AluSx SINE Alu 0 312 1 12391 87 7 28 chr5 166883006 166883191 -32746959 + THE1B-int LTR MaLR 1393 1580 0 2261 129 51 28 chr5 166883191 166883547 -32746603 + THE1B LTR MaLR 1 364 0 264 236 18 0 chr5 166883698 166883753 -32746397 - MIR SINE MIR -132 76 21 231 61 0 0 chr5 166883948 166883981 -32746169 + (TC)n Simple_repeat Simple_repeat 1 33 0 265 331 0 16 chr5 166884097 166884224 -32745926 + (CATATA)n Simple_repeat Simple_repeat 3 127 0 242 309 0 10 chr5 166884296 166884393 -32745757 + (CATATA)n Simple_repeat Simple_repeat 6 101 0 1780 152 6 55 chr5 166884658 166884986 -32745164 - AluJb SINE Alu 0 312 1 375 248 70 70 chr5 166885334 166885463 -32744687 + MIR3 SINE MIR 9 137 -71 671 265 17 33 chr5 166885564 166885778 -32744372 + MIR SINE MIR 40 249 -13 298 359 62 0 chr5 166885934 166886079 -32744071 + MIR3 SINE MIR 24 177 -31 813 199 99 6 chr5 166886189 166886370 -32743780 + MER6B DNA MER2_type 4 201 -9 290 316 130 2 chr5 166886756 166886919 -32743231 + MIR SINE MIR 2 181 -62 453 225 106 14 chr5 166887017 166887159 -32742991 - MIR SINE MIR -29 233 79 517 273 81 118 chr5 166887884 166888631 -32741519 - L2 LINE L2 -1 3271 2543 321 241 28 48 chr5 166888778 166888923 -32741227 - L1ME4a LINE L1 -21 6100 5959 609 314 43 19 chr5 166890124 166890334 -32739816 - MIR SINE MIR -43 219 5 350 294 71 40 chr5 166890680 166890806 -32739344 - MIR SINE MIR -96 166 37 316 311 26 40 chr5 166890973 166891124 -32739026 + MIR3 SINE MIR 35 183 -25 522 294 16 22 chr5 166891224 166891408 -32738742 + MER5A DNA MER1_type 7 189 0 526 265 8 8 chr5 166891438 166891570 -32738580 - L3 LINE CR1 -115 1462 1331 333 314 92 49 chr5 166892009 166892194 -32737956 - MIR3 SINE MIR -12 196 4 194 88 0 29 chr5 166892738 166892772 -32737378 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 196 312 143 13 chr5 166892795 166892872 -32737278 + MIR SINE MIR 37 123 -139 223 319 14 0 chr5 166892895 166892964 -32737186 - L2 LINE L2 0 3272 3203 727 281 99 19 chr5 166893117 166893430 -32736720 + MER102b DNA MER1_type 1 338 -3 761 256 94 75 chr5 166894025 166894345 -32735805 + MER102a DNA MER1_type 2 327 -3 370 281 0 26 chr5 166894561 166894675 -32735475 - MIR SINE MIR -55 153 43 373 283 38 0 chr5 166894777 166894883 -32735267 + MER117 DNA MER1_type 84 193 -4 729 0 0 0 chr5 166895935 166896016 -32734134 + (TTTC)n Simple_repeat Simple_repeat 1 81 0 4853 47 0 0 chr5 166896017 166896592 -32733558 - L1PA8 LINE L1 -20 6152 5578 237 65 0 0 chr5 166896791 166896822 -32733328 + (TG)n Simple_repeat Simple_repeat 2 32 0 323 330 92 26 chr5 166896862 166897208 -32732942 + L2 LINE L2 2124 2492 -822 272 258 56 34 chr5 166897298 166897387 -32732763 + L2 LINE L2 3182 3272 0 208 275 28 18 chr5 166897655 166897764 -32732386 + (TATG)n Simple_repeat Simple_repeat 1 110 0 552 270 194 14 chr5 166898035 166898246 -32731904 + MIR SINE MIR 1 249 -13 282 29 0 0 chr5 166898266 166898301 -32731849 + (TG)n Simple_repeat Simple_repeat 1 35 0 847 191 96 0 chr5 166899391 166899548 -32730602 - MER96 DNA MER1_type -3 172 1 391 218 68 53 chr5 166899703 166899836 -32730314 - MIR SINE MIR -11 251 117 333 167 0 0 chr5 166900131 166900185 -32729965 + L2 LINE L2 3217 3270 -2 492 265 106 16 chr5 166901033 166901222 -32728928 - MIR SINE MIR -55 207 2 558 273 40 28 chr5 166901959 166902135 -32728015 - MIR SINE MIR 0 262 85 242 191 59 44 chr5 166902804 166902872 -32727278 - MIR SINE MIR -109 153 85 * 395 314 64 32 chr5 166902870 166903058 -32727092 - MIR SINE MIR -7 255 62 273 270 43 43 chr5 166903540 166903655 -32726495 + MIR SINE MIR 34 138 -70 608 280 98 8 chr5 166903721 166903964 -32726186 + MIR SINE MIR 10 256 -6 362 225 120 21 chr5 166904314 166904456 -32725694 - L1ME4a LINE L1 -1 6120 5965 599 227 140 67 chr5 166904462 166904762 -32725388 - L1ME4a LINE L1 -204 5917 5596 568 245 85 21 chr5 166905216 166905404 -32724746 + MIR SINE MIR 63 262 0 433 349 15 0 chr5 166905561 166905693 -32724457 + L3 LINE CR1 1071 1204 -373 318 269 96 44 chr5 166905858 166906096 -32724054 - MIR SINE MIR -2 260 11 491 279 87 29 chr5 166906100 166906272 -32723878 + L3 LINE CR1 1290 1471 -106 350 258 75 0 chr5 166906315 166906408 -32723742 + MIR SINE MIR 49 148 -114 200 151 0 38 chr5 166907244 166907297 -32722853 + GA-rich Low_complexity Low_complexity 1 51 0 294 306 168 29 chr5 166907692 166907865 -32722285 - MIR3 SINE MIR -8 200 4 556 275 7 0 chr5 166908217 166908359 -32721791 + MIR SINE MIR 116 258 -4 25 0 0 0 chr5 166908368 166908393 -32721757 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 166908814 166908844 -32721306 + AT_rich Low_complexity Low_complexity 1 30 0 297 296 118 0 chr5 166909004 166909139 -32721011 + MIR3 SINE MIR 43 193 -15 21 0 0 0 chr5 166909522 166909543 -32720607 + AT_rich Low_complexity Low_complexity 1 21 0 315 302 70 28 chr5 166909553 166909768 -32720382 - L1ME4a LINE L1 -16 6105 5882 367 241 0 13 chr5 166909838 166909917 -32720233 + MIR SINE MIR 62 139 -69 522 279 35 15 chr5 166910044 166910245 -32719905 + L2 LINE L2 3108 3312 -1 395 244 15 37 chr5 166910670 166910805 -32719345 - MIR SINE MIR -74 188 57 2461 68 0 10 chr5 166910838 166911145 -32719005 - AluY SINE Alu -7 304 1 452 260 16 24 chr5 166912428 166912551 -32717599 - MIR SINE MIR -110 152 31 241 265 120 8 chr5 166912805 166912922 -32717228 + L1MC4a LINE L1 5805 5934 -1874 715 258 133 9 chr5 166912931 166913164 -32716986 + MIR SINE MIR 1 262 0 724 285 23 43 chr5 166914217 166914473 -32715677 + MIR SINE MIR 12 262 0 596 296 46 36 chr5 166914554 166914896 -32715254 + L1MC4a LINE L1 5576 5920 -244 247 146 36 0 chr5 166914920 166914975 -32715175 + (TA)n Simple_repeat Simple_repeat 2 58 0 315 248 15 136 chr5 166915342 166915540 -32714610 + MIR SINE MIR 35 208 -54 192 282 254 0 chr5 166916300 166916371 -32713779 + MIR SINE MIR 64 152 -56 488 210 210 7 chr5 166916426 166916569 -32713581 + MER5A DNA MER1_type 18 189 0 215 286 24 24 chr5 166916580 166916664 -32713486 - MER5A DNA MER1_type -44 145 62 917 168 39 95 chr5 166916675 166916907 -32713243 - L1MA10 LINE L1 -1 6333 6115 547 286 26 69 chr5 166917969 166918200 -32711950 - L3 LINE CR1 -72 1505 1285 481 328 65 16 chr5 166918879 166919065 -32711085 - MIR3 SINE MIR -10 198 4 190 448 11 11 chr5 166919457 166919638 -32710512 - MIR3 SINE MIR -19 189 9 885 179 82 53 chr5 166920585 166920792 -32709358 + MER20 DNA MER1_type 3 215 -4 194 270 63 0 chr5 166921705 166921768 -32708382 - L3b LINE CR1 -198 1385 1319 236 288 0 15 chr5 166922066 166922132 -32708018 + L3 LINE CR1 1390 1454 -123 600 274 43 6 chr5 166922418 166922582 -32707568 - MIR SINE MIR -79 183 14 190 107 0 0 chr5 166923119 166923147 -32707003 - MIR SINE MIR -117 145 118 184 128 26 26 chr5 166923778 166923817 -32706333 + L2 LINE L2 3274 3312 -1 548 101 0 13 chr5 166924616 166924695 -32705455 - MADE1 DNA Mariner -2 78 1 284 272 95 34 chr5 166925010 166925157 -32704993 + MIR SINE MIR 6 161 -101 22 56 0 0 chr5 166925967 166926003 -32704147 + AT_rich Low_complexity Low_complexity 1 36 0 696 286 33 29 chr5 166926018 166926263 -32703887 - MIR SINE MIR -11 251 6 289 320 10 0 chr5 166926311 166926411 -32703739 - MIR SINE MIR -13 249 149 399 289 23 31 chr5 166927012 166927140 -32703010 - MIR SINE MIR -63 145 19 315 297 24 24 chr5 166927606 166927771 -32702379 + L1ME3A LINE L1 5793 5957 -213 33 0 0 0 chr5 166928028 166928061 -32702089 + AT_rich Low_complexity Low_complexity 1 33 0 2463 78 0 3 chr5 166928071 166928377 -32701773 + AluY SINE Alu 1 305 -6 254 268 31 41 chr5 166928709 166928806 -32701344 + MLT1K LTR MaLR 160 255 -333 800 204 67 44 chr5 166929032 166929257 -32700893 + LTR67 LTR ERVL 320 549 -8 235 350 68 34 chr5 166929571 166929688 -32700462 - MIR SINE MIR -63 145 25 1103 259 68 0 chr5 166929725 166929961 -32700189 - MIR SINE MIR -4 258 7 488 179 38 0 chr5 166931236 166931342 -32698808 + L1MB7 LINE L1 6072 6181 -3 384 310 175 5 chr5 166931614 166931814 -32698336 + MIR SINE MIR 20 253 -9 404 336 42 7 chr5 166932392 166932535 -32697615 + MIR3 SINE MIR 18 165 -43 1219 266 39 12 chr5 166932940 166933271 -32696879 + MLT1C LTR MaLR 125 464 -3 527 255 131 7 chr5 166933286 166933439 -32696711 + MER117 DNA MER1_type 25 196 -1 198 295 219 31 chr5 166934482 166934706 -32695444 + L2 LINE L2 2537 2802 -512 422 230 267 0 chr5 166934746 166934933 -32695217 - MER5C DNA MER1_type -87 237 1 328 292 40 121 chr5 166935043 166935464 -32694686 + L2 LINE L2 2920 3306 -7 295 273 71 0 chr5 166936077 166936176 -32693974 + MIR3 SINE MIR 70 175 -33 291 272 130 0 chr5 166936259 166936351 -32693799 - L2 LINE L2 0 3272 3169 337 235 165 0 chr5 166936742 166936857 -32693293 + L2 LINE L2 3180 3313 0 218 310 121 0 chr5 166937790 166937848 -32692302 + L2 LINE L2 3208 3272 -41 464 356 113 0 chr5 166937937 166938159 -32691991 - MIR SINE MIR -8 254 8 519 258 23 135 chr5 166938315 166938575 -32691575 + L2 LINE L2 3028 3258 -14 259 200 0 0 chr5 166939390 166939435 -32690715 + MIR SINE MIR 41 85 -123 586 172 0 0 chr5 166939521 166939608 -32690542 + AluJ/FLAM SINE Alu 2 88 -224 975 327 98 55 chr5 166939633 166940639 -32689511 - L2 LINE L2 -2 3270 2218 355 247 93 10 chr5 166940865 166940962 -32689188 - MIR SINE MIR -113 149 45 219 265 214 0 chr5 166941337 166941435 -32688715 + MIR SINE MIR 71 189 -73 292 253 0 36 chr5 166941875 166941958 -32688192 - MIR SINE MIR -3 259 180 463 315 50 29 chr5 166942294 166942532 -32687618 - MIR SINE MIR -5 257 15 187 250 0 45 chr5 166942520 166942564 -32687586 - L3 LINE CR1 -30 1547 1506 * 399 90 0 60 chr5 166942639 166942706 -32687444 - L1PA7 LINE L1 0 6154 6092 419 234 0 11 chr5 166943089 166943183 -32686967 + MIR3 SINE MIR 106 198 -10 847 313 60 24 chr5 166943668 166944083 -32686067 + MLT1K LTR MaLR 159 588 0 877 296 113 35 chr5 166944471 166945185 -32684965 + L2 LINE L2 2531 3313 0 301 271 115 21 chr5 166945897 166945993 -32684157 + L2 LINE L2 3160 3264 -49 281 349 33 26 chr5 166946339 166946491 -32683659 + MIR3 SINE MIR 54 206 -2 523 265 245 15 chr5 166946655 166946859 -32683291 + MIR SINE MIR 7 257 -5 552 279 34 22 chr5 166947137 166947316 -32682834 - MIR3 SINE MIR -15 193 13 1030 187 8 51 chr5 166947338 166947401 -32682749 + MER97b DNA MER1_type? 27 91 -962 2134 109 3 7 chr5 166947401 166947737 -32682413 - AluSx SINE Alu 0 335 1 1030 187 8 51 chr5 166947737 166947907 -32682243 + MER97b DNA MER1_type? 91 251 -802 1852 224 73 48 chr5 166947923 166948274 -32681876 + MER97a DNA MER1_type? 364 734 -160 891 194 0 19 chr5 166948274 166948429 -32681721 + FRAM SINE Alu 2 153 -13 1852 224 73 48 chr5 166948429 166948595 -32681555 + MER97a DNA MER1_type? 734 894 0 652 294 72 21 chr5 166949161 166949396 -32680754 - MIR SINE MIR -7 255 9 386 273 28 28 chr5 166950009 166950152 -32679998 + MIR SINE MIR 112 254 -8 212 353 39 49 chr5 166950262 166950364 -32679786 + MIR SINE MIR 33 133 -75 217 259 36 80 chr5 166950478 166950590 -32679560 - MIR SINE MIR -72 136 30 507 239 168 13 chr5 166950903 166951058 -32679092 - MER5A DNA MER1_type -2 187 9 360 271 42 10 chr5 166951318 166951414 -32678736 + MIR3 SINE MIR 10 108 -100 282 234 280 9 chr5 166951961 166952068 -32678082 + MIR3 SINE MIR 11 146 -62 372 262 113 0 chr5 166952070 166952211 -32677939 - MIR SINE MIR 0 262 106 864 153 0 29 chr5 166952248 166952385 -32677765 - FLAM_A SINE Alu 0 133 1 214 334 0 25 chr5 166953580 166953660 -32676490 + MIR SINE MIR 75 151 -65 * 222 305 0 0 chr5 166953657 166953716 -32676434 - MIR SINE MIR -1 261 203 275 310 48 55 chr5 166953725 166953870 -32676280 + L3 LINE CR1 1170 1313 -264 527 300 82 5 chr5 166953874 166954094 -32676056 + MIR SINE MIR 20 256 -6 283 362 32 0 chr5 166954405 166954499 -32675651 + L2 LINE L2 3157 3253 -19 610 270 65 84 chr5 166954617 166954972 -32675178 + L2 LINE L2 2187 2534 -780 514 179 0 42 chr5 166954974 166955069 -32675081 + MER2 DNA MER2_type 2 92 -253 1590 170 91 0 chr5 166955074 166955350 -32674800 + AluJb SINE Alu 1 301 -11 5680 137 44 65 chr5 166955350 166956438 -32673712 + L1PB1 LINE L1 7 1071 -5792 15418 189 13 8 chr5 166956440 166960493 -32669657 + L1PB1 LINE L1 2454 6510 -357 420 71 0 0 chr5 166960493 166960549 -32669601 + (CA)n Simple_repeat Simple_repeat 2 57 0 15418 189 13 8 chr5 166960549 166960670 -32669480 + L1PB1 LINE L1 6510 6629 -238 2622 218 91 48 chr5 166960772 166961793 -32668357 - L1M4c LINE L1 -4741 1905 840 267 79 0 0 chr5 166961821 166961859 -32668291 + (GA)n Simple_repeat Simple_repeat 1 38 0 2343 55 3 3 chr5 166962032 166962323 -32667827 + AluY SINE Alu 1 291 -20 1043 295 70 16 chr5 166962789 166963159 -32666991 + L1MEc LINE L1 362 751 -5970 1163 219 42 11 chr5 166963259 166963519 -32666631 - MSTA LTR MaLR -160 268 1 655 260 87 59 chr5 166963538 166964011 -32666139 + L1MEc LINE L1 1635 2163 -4517 3184 131 10 12 chr5 166964579 166965091 -32665059 - MER41B LTR ERV1 -124 511 1 473 317 127 5 chr5 166965099 166965320 -32664830 - L2 LINE L2 -383 2931 2684 519 338 6 6 chr5 166965444 166965604 -32664546 - MIR SINE MIR -98 164 5 1240 112 0 28 chr5 166965886 166966065 -32664085 - AluSq SINE Alu -139 174 1 1041 253 30 48 chr5 166967590 166968028 -32662122 - MLT1C LTR MaLR 0 467 38 226 385 86 0 chr5 166969020 166969137 -32661013 + L2 LINE L2 3142 3268 -4 272 297 0 0 chr5 166969238 166969312 -32660838 + CT-rich Low_complexity Low_complexity 3 76 0 197 262 29 122 chr5 166969798 166969970 -32660180 + MER5B DNA MER1_type 18 173 -5 244 284 77 35 chr5 166970041 166970210 -32659940 - MLT1K LTR MaLR -71 517 342 234 203 29 0 chr5 166970459 166970528 -32659622 + (TA)n Simple_repeat Simple_repeat 2 72 0 28 29 0 0 chr5 166970531 166970566 -32659584 + AT_rich Low_complexity Low_complexity 1 35 0 359 264 6 51 chr5 166970767 166970945 -32659205 + L1ME3A LINE L1 5782 5951 -219 2103 115 0 0 chr5 166971255 166971543 -32658607 + AluSg SINE Alu 1 288 -22 440 167 22 0 chr5 166972204 166972294 -32657856 + GA-rich Low_complexity Low_complexity 3 94 0 1506 228 89 24 chr5 166972297 166972713 -32657437 - MLT2B1 LTR ERVL -77 443 1 4015 121 0 8 chr5 166972721 166973366 -32656784 + L1PA10 LINE L1 3982 4621 -1525 5951 102 30 2 chr5 166973366 166974316 -32655834 + L1PA10 LINE L1 5190 6164 -4 2840 0 0 0 chr5 166974561 166974865 -32655285 + AluYa5 SINE Alu 1 304 -7 580 203 203 0 chr5 166974976 166975119 -32655031 + MER20 DNA MER1_type 48 219 0 258 408 32 0 chr5 166975176 166975333 -32654817 - MIR3 SINE MIR -15 193 32 519 198 32 117 chr5 166975452 166975596 -32654554 + MLT1F1 LTR MaLR 1 114 -453 2125 108 7 13 chr5 166975596 166975901 -32654249 - AluSg SINE Alu -7 303 1 519 198 32 117 chr5 166975901 166976018 -32654132 + MLT1F1 LTR MaLR 114 239 -328 * 815 208 31 51 chr5 166976012 166976244 -32653906 + MLT1F1 LTR MaLR 340 652 -2 21 36 0 0 chr5 166976330 166976358 -32653792 + AT_rich Low_complexity Low_complexity 1 28 0 244 251 135 116 chr5 166976773 166976988 -32653162 - L3 LINE CR1 -10 1567 1349 1044 197 4 94 chr5 166978557 166978801 -32651349 - MER58A DNA MER1_type -2 222 1 687 275 95 15 chr5 166979445 166979718 -32650432 + L2 LINE L2 1742 2036 -1278 989 284 123 31 chr5 166979722 166980406 -32649744 + L2 LINE L2 2545 3305 -8 611 308 42 62 chr5 166980732 166981138 -32649012 - L2 LINE L2 0 3313 2916 524 328 96 4 chr5 166981152 166981402 -32648748 + MLT1I LTR MaLR 19 291 -118 1434 125 45 35 chr5 166981428 166981715 -32648435 - L1M4 LINE L1 -485 5699 5410 230 347 71 0 chr5 166981738 166981836 -32648314 - L2 LINE L2 -656 2658 2554 250 246 0 14 chr5 166981869 166981938 -32648212 + MER67B LTR ERV1 47 114 -547 364 303 36 62 chr5 166982060 166982255 -32647895 + MER67A LTR ERV1 395 543 0 2534 337 101 21 chr5 166982265 166983876 -32646274 - L2 LINE L2 -775 2539 790 1309 143 35 13 chr5 166983876 166984107 -32646043 - MER46A DNA MER2_type 0 236 1 2534 337 101 21 chr5 166984107 166984157 -32645993 - L2 LINE L2 -2524 790 745 274 281 157 0 chr5 166984339 166984428 -32645722 - MER91B DNA MER1_type -87 103 1 649 169 41 151 chr5 166984461 166984680 -32645470 + MER20 DNA MER1_type 1 195 -24 29 70 0 0 chr5 166985216 166985273 -32644877 + AT_rich Low_complexity Low_complexity 1 57 0 653 75 66 0 chr5 166985279 166985385 -32644765 - MER2 DNA MER2_type -135 210 98 * 859 223 142 45 chr5 166985380 166985785 -32644365 - MLT1D LTR MaLR -27 478 42 2077 166 0 0 chr5 166985785 166986093 -32644057 - AluSx SINE Alu -2 310 3 859 223 142 45 chr5 166986093 166986140 -32644010 - MLT1D LTR MaLR -463 42 1 22 0 0 0 chr5 166986749 166986771 -32643379 + AT_rich Low_complexity Low_complexity 1 22 0 2526 186 66 28 chr5 166987320 166987434 -32642716 + L1MC3 LINE L1 4742 4850 -1296 2191 126 3 0 chr5 166987434 166987728 -32642422 - AluSx SINE Alu -17 295 1 2526 186 66 28 chr5 166987728 166988759 -32641391 + L1MC3 LINE L1 4850 5355 -791 1161 204 9 4 chr5 166988759 166988989 -32641161 + MER68 LTR ERV1 1 231 -331 6272 192 41 44 chr5 166988989 166990638 -32639512 + L1MC3 LINE L1 6141 7784 -1 182 269 19 0 chr5 166991454 166991506 -32638644 + L2 LINE L2 3014 3066 -206 2852 91 21 30 chr5 166991621 166991973 -32638177 - L1PA11 LINE L1 0 6174 5825 2138 108 3 3 chr5 166991973 166992260 -32637890 - AluSq SINE Alu -26 287 1 2852 91 21 30 chr5 166992260 166992337 -32637813 - L1PA11 LINE L1 -349 5825 5749 200 348 34 11 chr5 166993682 166993771 -32636379 - MER5A DNA MER1_type -4 185 95 380 280 157 14 chr5 166993939 166994154 -32635996 - MIR SINE MIR 0 262 13 351 290 107 15 chr5 166994360 166994491 -32635659 - MIR SINE MIR -10 252 110 2219 182 60 28 chr5 166994491 166995023 -32635127 + MER89 LTR ERV1 11 559 0 337 294 12 0 chr5 166995025 166995110 -32635040 - MIR SINE MIR -165 97 12 832 179 75 42 chr5 166995238 166995450 -32634700 - MER20 DNA MER1_type 0 219 1 612 185 172 13 chr5 166995458 166995609 -32634541 - MER5A DNA MER1_type 0 189 15 532 263 9 18 chr5 166995603 166995765 -32634385 + MER5A DNA MER1_type 20 185 -4 * 363 385 42 0 chr5 166996483 166996649 -32633501 - MIR SINE MIR -30 232 60 204 330 50 111 chr5 166996755 166997134 -32633016 + L2 LINE L2 2622 2977 -337 321 299 80 53 chr5 166997186 166997245 -32632905 + L2 LINE L2 3109 3165 -148 852 247 188 18 chr5 166997245 166997638 -32632512 + LTR16B LTR ERVL 1 460 -4 321 299 80 53 chr5 166997638 166997765 -32632385 + L2 LINE L2 3165 3300 -13 324 70 0 0 chr5 166997873 166997916 -32632234 + (CA)n Simple_repeat Simple_repeat 2 44 0 357 233 56 0 chr5 166998097 166998187 -32631963 + L2 LINE L2 3218 3312 -1 425 277 125 22 chr5 166999092 166999276 -32630874 + MIR SINE MIR 34 236 -26 21 57 0 0 chr5 166999286 166999321 -32630829 + AT_rich Low_complexity Low_complexity 1 35 0 305 321 42 12 chr5 166999638 166999803 -32630347 - MLT1J LTR MaLR 0 511 342 27 62 0 37 chr5 167000099 167000180 -32629970 + AT_rich Low_complexity Low_complexity 1 78 0 4380 203 79 100 chr5 167000368 167001379 -32628771 + L1MC3 LINE L1 5849 6880 -905 1468 92 0 68 chr5 167001379 167001628 -32628522 + L1MA1 LINE L1 6071 6302 0 4380 203 79 100 chr5 167001628 167002001 -32628149 + L1MC3 LINE L1 6880 7260 -525 301 247 11 43 chr5 167002001 167002094 -32628056 + MLT1F1 LTR MaLR 35 124 -443 4380 203 79 100 chr5 167002094 167002685 -32627465 + L1MC3 LINE L1 7260 7783 -2 451 318 34 34 chr5 167003334 167003393 -32626757 + L2 LINE L2 3125 3183 -89 1868 175 3 0 chr5 167003393 167003690 -32626460 + AluJo SINE Alu 1 298 -14 451 318 34 34 chr5 167003690 167003778 -32626372 + L2 LINE L2 3182 3272 0 758 258 70 8 chr5 167004714 167004917 -32625233 + MIR SINE MIR 48 261 -1 25 31 0 0 chr5 167004921 167004953 -32625197 + AT_rich Low_complexity Low_complexity 1 32 0 211 277 0 0 chr5 167005304 167005351 -32624799 + MIR SINE MIR 53 99 -163 8799 184 26 49 chr5 167005463 167006423 -32623727 + L1MC3 LINE L1 5659 6640 -1145 1637 144 58 76 chr5 167006423 167006805 -32623345 - THE1C LTR MaLR 0 375 1 8799 184 26 49 chr5 167006805 167008015 -32622135 + L1MC3 LINE L1 6640 7779 -6 4035 73 11 0 chr5 167008031 167008577 -32621573 + L1PA8 LINE L1 5621 6172 0 200 192 39 51 chr5 167008585 167008663 -32621487 + A-rich Low_complexity Low_complexity 2 78 0 320 335 25 43 chr5 167008691 167008852 -32621298 - MIR SINE MIR -64 198 41 274 322 25 34 chr5 167008878 167008996 -32621154 + L2 LINE L2 3182 3298 -15 832 288 118 42 chr5 167009750 167010075 -32620075 + L2 LINE L2 2712 3102 -211 1090 267 156 10 chr5 167010075 167010480 -32619670 - LTR16B LTR ERVL 0 464 1 832 288 118 42 chr5 167010480 167010706 -32619444 + L2 LINE L2 3102 3309 -4 248 258 31 62 chr5 167011028 167011125 -32619025 - MIR SINE MIR -59 203 110 1846 113 4 8 chr5 167011656 167011959 -32618191 - AluSg SINE Alu 0 310 37 1492 83 26 9 chr5 167012305 167012670 -32617480 - L1P4 LINE L1 -679 5489 5123 3991 86 48 0 chr5 167012670 167013229 -32616921 + L1PA10 LINE L1 5575 6160 -8 189 0 0 0 chr5 167013229 167013250 -32616900 + (TTTAA)n Simple_repeat Simple_repeat 1 21 0 302 316 43 26 chr5 167013748 167013865 -32616285 - MIR3 SINE MIR -48 160 42 517 282 55 17 chr5 167015195 167015376 -32614774 - MER5A DNA MER1_type -1 188 1 230 352 56 9 chr5 167015442 167015550 -32614600 - MIR SINE MIR -121 141 29 363 339 100 0 chr5 167016035 167016165 -32613985 + MIR3 SINE MIR 58 200 -8 2850 209 17 57 chr5 167016356 167017063 -32613087 - LTR8 LTR ERV1 0 691 13 523 244 182 0 chr5 167018012 167018221 -32611929 + MIR SINE MIR 16 262 0 318 324 94 18 chr5 167018347 167018517 -32611633 - MIR SINE MIR -62 200 18 2405 100 3 0 chr5 167018832 167019143 -32611007 + AluSx SINE Alu 1 312 0 1964 171 0 0 chr5 167020309 167020618 -32609532 - AluSx SINE Alu -2 310 2 1172 195 36 17 chr5 167021597 167021930 -32608220 - MSTD LTR MaLR 0 396 1 393 234 28 0 chr5 167022087 167022194 -32607956 + MER103 DNA DNA 56 165 -1 1289 197 4 4 chr5 167022519 167022747 -32607403 + AluJo SINE Alu 41 268 -44 2625 134 17 0 chr5 167022752 167023162 -32606988 + HSMAR1 DNA Mariner 871 1287 0 384 288 65 24 chr5 167023311 167023481 -32606669 + MIR3 SINE MIR 6 182 -26 248 235 17 96 chr5 167023722 167023837 -32606313 - L2 LINE L2 -97 3216 3111 933 90 15 0 chr5 167023844 167023978 -32606172 + AluY SINE Alu 174 309 -2 916 280 44 110 chr5 167024018 167024663 -32605487 - L2 LINE L2 -243 3070 2462 185 374 42 48 chr5 167025246 167025412 -32604738 - MER5A DNA MER1_type -7 182 18 596 329 76 48 chr5 167025866 167026285 -32603865 + HERV16 LTR ERVL 384 814 -4182 694 327 43 9 chr5 167026387 167026711 -32603439 + HERV16 LTR ERVL 938 1272 -3724 912 273 42 73 chr5 167026781 167027682 -32602468 + HERV16 LTR ERVL 1386 2280 -2939 1636 167 8 0 chr5 167027726 167027983 -32602167 + AluJo SINE Alu 24 282 -30 359 336 9 50 chr5 167027996 167028216 -32601934 + HERV16 LTR ERVL 2317 2527 -2469 2453 97 0 0 chr5 167028542 167028853 -32601297 + AluSx SINE Alu 1 311 -1 669 236 130 75 chr5 167028981 167029396 -32600754 + LTR16A1 LTR ERVL 20 457 0 2351 67 0 0 chr5 167030610 167030930 -32599220 + AluY SINE Alu 1 320 0 725 202 77 30 chr5 167031193 167031361 -32598789 - FRAM SINE Alu 0 176 1 201 74 0 0 chr5 167031478 167031505 -32598645 + (T)n Simple_repeat Simple_repeat 1 27 0 439 377 3 39 chr5 167031876 167032160 -32597990 + L3 LINE CR1 1181 1454 -123 214 194 0 0 chr5 167032161 167032197 -32597953 + L3 LINE CR1 1429 1464 -113 1880 149 49 6 chr5 167032776 167033105 -32597045 + MER61A LTR ERV1 1 343 0 301 313 73 28 chr5 167033154 167033333 -32596817 + MIR3 SINE MIR 9 195 -13 329 322 87 39 chr5 167033654 167033862 -32596288 + MIR SINE MIR 11 228 -34 199 333 177 0 chr5 167033867 167033963 -32596187 + L2 LINE L2 3146 3258 -14 24 53 0 0 chr5 167034855 167034893 -32595257 + AT_rich Low_complexity Low_complexity 1 38 0 668 225 70 5 chr5 167034959 167035146 -32595004 + Charlie5 DNA MER1_type 1 199 -2413 643 250 91 8 chr5 167035145 167035397 -32594753 + Charlie5 DNA MER1_type 2352 2624 0 * 559 305 75 53 chr5 167035431 167036370 -32593780 + L1ME LINE L1 571 1529 -5105 310 228 44 7 chr5 167036406 167036511 -32593639 + L1ME LINE L1 1428 1525 -5017 612 273 156 39 chr5 167036965 167037783 -32592367 + L1ME LINE L1 1674 2599 -4226 772 189 136 42 chr5 167037803 167037878 -32592272 + MER2 DNA MER2_type 56 122 -223 1763 164 29 15 chr5 167037878 167038219 -32591931 - MER7A DNA MER2_type -1 345 2 772 189 136 42 chr5 167038219 167038407 -32591743 + MER2 DNA MER2_type 122 344 -1 1150 254 41 65 chr5 167038408 167038458 -32591692 + L1ME LINE L1 2718 2768 -3876 2742 130 22 0 chr5 167038458 167038873 -32591277 + MSTA LTR MaLR 3 426 -2 1150 254 41 65 chr5 167038873 167039571 -32590579 + L1ME LINE L1 2768 3448 -3196 450 226 91 5 chr5 167039583 167039804 -32590346 + L1ME LINE L1 3560 3799 -2845 3927 215 109 55 chr5 167039906 167041032 -32589118 + L1MC4 LINE L1 6359 7599 -443 1699 176 58 9 chr5 167041032 167041361 -32588789 - MER7A DNA MER2_type -3 343 1 3927 215 109 55 chr5 167041361 167041831 -32588319 + L1MC4 LINE L1 7599 8042 0 749 289 71 6 chr5 167041864 167042228 -32587922 + L1ME LINE L1 3866 4253 -2391 655 204 24 57 chr5 167042234 167042445 -32587705 + L1MC4 LINE L1 7814 8017 -25 1543 213 113 91 chr5 167043084 167043719 -32586431 + MLT1E1 LTR MaLR 6 654 0 2072 120 0 54 chr5 167044031 167044348 -32585802 - AluSc SINE Alu -9 300 1 300 223 115 51 chr5 167045050 167045207 -32584943 + L1ME LINE L1 5530 5696 -425 464 263 42 0 chr5 167045865 167045983 -32584167 + MIR SINE MIR 78 200 -62 2609 119 33 12 chr5 167046095 167046514 -32583636 - L1PA16 LINE L1 -10 6156 5729 240 302 115 22 chr5 167047249 167047388 -32582762 + MIR SINE MIR 94 245 -17 348 342 62 12 chr5 167047421 167047582 -32582568 + MIR3 SINE MIR 19 187 -21 253 333 0 0 chr5 167047834 167047903 -32582247 - L2 LINE L2 -212 3060 2992 6604 66 19 0 chr5 167048162 167049505 -32580645 - L1PA7 LINE L1 -2 6152 4799 24 32 0 0 chr5 167049642 167049673 -32580477 + AT_rich Low_complexity Low_complexity 1 31 0 202 159 0 63 chr5 167050904 167050967 -32579183 + A-rich Low_complexity Low_complexity 1 59 0 754 328 78 25 chr5 167051010 167051577 -32578573 + L1MEd LINE L1 20 616 -5503 407 295 18 9 chr5 167051581 167051693 -32578457 + (CCCTAA)n Simple_repeat Simple_repeat 6 118 0 10148 35 3 149 chr5 167051695 167053318 -32576832 + SVA Other Other 1 1386 0 1346 184 92 37 chr5 167053355 167053627 -32576523 + AluJo SINE Alu 3 289 -13 354 304 89 0 chr5 167053653 167053788 -32576362 + L1MEd LINE L1 647 793 -5326 352 276 111 63 chr5 167053938 167054335 -32575815 + L1ME3A LINE L1 5444 5860 -310 21 36 0 0 chr5 167054406 167054434 -32575716 + AT_rich Low_complexity Low_complexity 1 28 0 1336 165 22 84 chr5 167054749 167055200 -32574950 - MLT2C1 LTR ERVL 0 397 5 337 293 125 31 chr5 167055235 167055627 -32574523 - L1MC4a LINE L1 -1926 5882 5454 574 212 55 12 chr5 167055800 167055965 -32574185 + L1MCc LINE L1 793 964 -5459 257 245 52 136 chr5 167057972 167058127 -32572023 - L2 LINE L2 -1 3312 3171 374 315 67 24 chr5 167058289 167058454 -32571696 - MIR SINE MIR -78 184 13 668 178 83 39 chr5 167058484 167058664 -32571486 + MER5A DNA MER1_type 1 188 -1 313 310 49 43 chr5 167059523 167059707 -32570443 + MLT1L LTR MaLR 429 613 -2 430 303 83 9 chr5 167059723 167059951 -32570199 + L1ME LINE L1 5567 5811 -310 403 260 10 20 chr5 167060285 167060385 -32569765 + MER5B DNA MER1_type 77 175 -3 322 325 123 0 chr5 167060387 167060550 -32569600 - MIR SINE MIR -63 199 17 1660 186 92 82 chr5 167061649 167061702 -32568448 - MLT1D LTR MaLR 0 505 454 261 0 0 0 chr5 167061702 167061731 -32568419 + (CA)n Simple_repeat Simple_repeat 1 29 0 1660 186 92 82 chr5 167061731 167062177 -32567973 - MLT1D LTR MaLR -51 454 1 265 204 34 11 chr5 167063516 167063604 -32566546 + A-rich Low_complexity Low_complexity 3 92 0 311 208 22 34 chr5 167063625 167063803 -32566347 + GA-rich Low_complexity Low_complexity 1 176 0 216 0 0 0 chr5 167064283 167064307 -32565843 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1586 187 11 7 chr5 167064959 167065232 -32564918 - AluJb SINE Alu -18 294 21 271 281 18 41 chr5 167066670 167066841 -32563309 + GA-rich Low_complexity Low_complexity 4 170 0 2323 56 3 26 chr5 167067693 167067995 -32562155 + AluY SINE Alu 1 295 -16 795 256 57 9 chr5 167069255 167069485 -32560665 + MIR SINE MIR 14 254 -8 195 129 0 0 chr5 167069486 167069517 -32560633 + (TGG)n Simple_repeat Simple_repeat 1 31 0 255 259 157 61 chr5 167069533 167069680 -32560470 - MIR SINE MIR -70 192 32 319 298 183 0 chr5 167070067 167070171 -32559979 + L2 LINE L2 3145 3267 -5 207 209 75 15 chr5 167070193 167070260 -32559890 - L2 LINE L2 -67 3246 3176 237 65 0 0 chr5 167070980 167071011 -32559139 + (TA)n Simple_repeat Simple_repeat 2 32 0 393 259 70 90 chr5 167071052 167071253 -32558897 + MIR SINE MIR 1 197 -65 402 240 56 80 chr5 167071523 167071583 -32558567 - MIR SINE MIR -135 127 67 2368 88 0 7 chr5 167071583 167071891 -32558259 + AluY SINE Alu 1 306 -5 402 240 56 80 chr5 167071891 167071955 -32558195 - MIR SINE MIR -195 67 6 422 304 32 32 chr5 167072034 167072192 -32557958 + MIR SINE MIR 34 191 -71 195 276 105 29 chr5 167072244 167072349 -32557801 - MIR3 SINE MIR -14 194 82 501 268 180 0 chr5 167073834 167074028 -32556122 - MIR SINE MIR -18 244 16 3009 145 37 27 chr5 167074241 167074841 -32555309 + L1PB4 LINE L1 5546 6151 -5 396 394 0 0 chr5 167074880 167075022 -32555128 + L2 LINE L2 3126 3267 -5 2915 231 22 46 chr5 167075155 167076034 -32554116 - L1ME1 LINE L1 -5 6161 5296 212 0 36 0 chr5 167076034 167076062 -32554088 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2915 231 22 46 chr5 167076062 167076113 -32554037 - L1ME1 LINE L1 -870 5296 5245 607 275 0 0 chr5 167076167 167076305 -32553845 - MIR SINE MIR -75 187 50 248 324 77 33 chr5 167077056 167077238 -32552912 - MIR SINE MIR -62 200 11 393 318 166 7 chr5 167077556 167077707 -32552443 + MER5A DNA MER1_type 7 181 -8 2985 304 77 44 chr5 167077865 167079418 -32550732 + L2 LINE L2 358 1960 -1354 27 29 0 0 chr5 167079584 167079618 -32550532 + AT_rich Low_complexity Low_complexity 1 34 0 260 352 11 11 chr5 167079673 167079761 -32550389 + MIR SINE MIR 64 151 -57 210 246 43 0 chr5 167080418 167080487 -32549663 - MIR3 SINE MIR -18 190 119 404 275 153 18 chr5 167080578 167080807 -32549343 - MIR SINE MIR 0 262 3 206 329 44 51 chr5 167081358 167081495 -32548655 - MIR SINE MIR -116 146 11 713 309 64 78 chr5 167081728 167082229 -32547921 - L2 LINE L2 0 3313 2820 284 317 87 49 chr5 167083369 167083552 -32546598 + MIR3 SINE MIR 1 190 -18 293 294 24 0 chr5 167083552 167083637 -32546513 + Tigger5 DNA MER2_type 2 88 -2235 202 307 27 13 chr5 167084686 167084751 -32545399 + L2 LINE L2 3193 3261 -11 585 42 0 0 chr5 167084751 167084823 -32545327 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 335 379 34 5 chr5 167085460 167085666 -32544484 + L2 LINE L2 711 922 -2392 256 275 184 9 chr5 167085980 167086089 -32544061 + L2 LINE L2 3142 3269 -3 696 358 74 32 chr5 167086388 167087356 -32542794 + L2 LINE L2 2053 3061 -211 235 279 19 0 chr5 167088305 167088409 -32541741 + L1M4 LINE L1 2676 2781 -3365 761 263 45 16 chr5 167088645 167088888 -32541262 - MIR SINE MIR -6 256 7 281 352 31 23 chr5 167089098 167089226 -32540924 - L2 LINE L2 -28 3244 3116 199 328 0 15 chr5 167089375 167089442 -32540708 - MIR SINE MIR -189 73 8 309 26 0 0 chr5 167089762 167089800 -32540350 + (TG)n Simple_repeat Simple_repeat 1 38 0 243 183 21 11 chr5 167089807 167089900 -32540250 + GA-rich Low_complexity Low_complexity 1 94 0 378 252 48 19 chr5 167089953 167090056 -32540094 + MIR3 SINE MIR 87 192 -16 181 241 0 37 chr5 167090239 167090291 -32539859 - L3 LINE CR1 -2 1575 1526 463 252 168 0 chr5 167090291 167090446 -32539704 - MER5A DNA MER1_type 0 189 9 1413 155 0 0 chr5 167090537 167090744 -32539406 - AluSx SINE Alu -105 207 1 251 316 0 0 chr5 167091108 167091184 -32538966 - MER2 DNA MER2_type 0 345 270 1164 159 10 0 chr5 167091210 167091418 -32538732 - MER2 DNA MER2_type -135 210 1 1194 139 56 0 chr5 167091634 167091849 -32538301 - L1PA13 LINE L1 -4 6159 5933 186 118 0 0 chr5 167091888 167091922 -32538228 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 5187 160 18 23 chr5 167091922 167093805 -32536345 - L1PA7 LINE L1 -24 6130 4263 336 240 67 19 chr5 167093808 167093912 -32536238 - MIR SINE MIR -117 145 37 612 302 102 22 chr5 167093925 167094200 -32535950 + L2 LINE L2 2545 2841 -473 2359 107 4 34 chr5 167094202 167094762 -32535388 - MER51A LTR ERV1 0 634 1 224 327 0 27 chr5 167094762 167094872 -32535278 + L2 LINE L2 2880 2986 -286 593 250 14 71 chr5 167095451 167095663 -32534487 + MIR SINE MIR 24 223 -39 531 198 9 2 chr5 167096298 167096431 -32533719 + L1M LINE L1 5270 5406 -761 202 329 0 53 chr5 167096475 167096551 -32533599 - L3 LINE CR1 -538 1039 968 307 143 65 52 chr5 167096998 167097075 -32533075 + MLT1I LTR MaLR 326 403 -6 825 305 97 5 chr5 167097439 167097809 -32532341 + MLT1I LTR MaLR 6 409 0 368 252 34 25 chr5 167097858 167097977 -32532173 + MIR SINE MIR 143 262 0 317 367 20 13 chr5 167098126 167098276 -32531874 + LTR16C LTR ERVL 81 231 -260 237 254 103 71 chr5 167098422 167098548 -32531602 - L3 LINE CR1 -313 1264 1135 31 44 0 0 chr5 167098793 167098838 -32531312 + AT_rich Low_complexity Low_complexity 1 45 0 593 277 28 17 chr5 167098861 167099038 -32531112 - MIR SINE MIR -73 189 11 1512 106 0 249 chr5 167099169 167099555 -32530595 + AluSx SINE Alu 1 290 -22 3801 163 13 1 chr5 167099559 167100879 -32529271 + L1PB1 LINE L1 4457 5788 -363 499 81 78 12 chr5 167100881 167101110 -32529040 + (TA)n Simple_repeat Simple_repeat 1 244 0 2119 156 11 0 chr5 167101115 167101473 -32528677 + L1PB1 LINE L1 5782 6143 -8 856 337 33 18 chr5 167101702 167102097 -32528053 + MLT1I LTR MaLR 1 401 -8 205 254 0 79 chr5 167102110 167102173 -32527977 + MIR SINE MIR 91 148 -60 901 330 113 22 chr5 167102384 167102928 -32527222 + L2 LINE L2 2721 3313 0 240 143 0 0 chr5 167103650 167103692 -32526458 + (T)n Simple_repeat Simple_repeat 1 42 0 342 301 117 25 chr5 167104715 167104878 -32525272 - MER5A DNA MER1_type -4 185 8 257 141 47 0 chr5 167105086 167105171 -32524979 + (TA)n Simple_repeat Simple_repeat 2 90 0 447 308 38 13 chr5 167105543 167105702 -32524448 + MIR3 SINE MIR 38 200 -8 190 322 95 59 chr5 167106550 167106854 -32523296 + L2 LINE L2 2929 3243 -70 220 268 84 0 chr5 167108504 167108575 -32521575 - MIR SINE MIR 0 262 186 389 333 72 11 chr5 167108906 167109086 -32521064 - L3 LINE CR1 -127 1450 1260 347 320 51 39 chr5 167109476 167109654 -32520496 - MLT1K LTR MaLR -382 206 27 191 246 33 16 chr5 167109703 167109764 -32520386 - L3 LINE CR1 -318 1259 1198 301 210 0 0 chr5 167110245 167110307 -32519843 - MER103 DNA DNA -46 120 59 225 346 89 10 chr5 167110567 167110668 -32519482 + MIR SINE MIR 37 145 -63 236 267 20 89 chr5 167111122 167111223 -32518927 + MIR SINE MIR 58 151 -57 1854 106 49 0 chr5 167111979 167112274 -32517876 - AluSx SINE Alu 0 311 4 465 276 0 24 chr5 167112459 167112629 -32517521 - L1MC5 LINE L1 -50 7911 7746 252 0 0 0 chr5 167112671 167112699 -32517451 + (TG)n Simple_repeat Simple_repeat 2 29 0 274 301 48 10 chr5 167113928 167114031 -32516119 + MIR SINE MIR 37 143 -119 180 0 0 0 chr5 167114032 167114052 -32516098 + (A)n Simple_repeat Simple_repeat 1 20 0 224 272 62 12 chr5 167115315 167115396 -32514754 + L2 LINE L2 3228 3312 -1 325 287 115 51 chr5 167115585 167115742 -32514408 - MIR SINE MIR -73 189 23 11786 124 30 12 chr5 167117161 167119508 -32510642 + Tigger1 DNA MER2_type 1 2418 0 282 320 88 50 chr5 167120007 167120188 -32509962 + L2 LINE L2 2869 3056 -216 1573 171 41 35 chr5 167121694 167122039 -32508111 + MER7A DNA MER2_type 2 346 0 609 263 91 35 chr5 167122474 167122672 -32507478 - MER63A DNA MER1_type 0 210 2 581 273 84 38 chr5 167123291 167123529 -32506621 - MIR SINE MIR -10 252 4 193 398 48 0 chr5 167123536 167123619 -32506531 - MIR SINE MIR -84 124 38 26 30 0 0 chr5 167123680 167123713 -32506437 + AT_rich Low_complexity Low_complexity 1 33 0 589 218 36 31 chr5 167124014 167124207 -32505943 - MER31B LTR ERV1 0 466 273 616 206 15 0 chr5 167124289 167124420 -32505730 - MER31B LTR ERV1 -333 133 1 211 360 102 36 chr5 167124638 167125097 -32505053 + L2 LINE L2 2553 3086 -186 490 184 0 10 chr5 167125827 167125930 -32504220 - MER58 DNA MER1_type -1 2419 2318 186 184 79 0 chr5 167126056 167126094 -32504056 - L3 LINE CR1 -292 1285 1245 660 160 0 19 chr5 167126233 167126339 -32503811 + FRAM SINE Alu 59 162 -14 338 288 131 20 chr5 167126711 167126864 -32503286 + L1MEc LINE L1 37 206 -6190 2062 201 88 11 chr5 167126865 167126897 -32503253 - MLT2B1 LTR ERVL -7 513 485 798 109 0 0 chr5 167126897 167127016 -32503134 + (TGGA)n Simple_repeat Simple_repeat 3 121 0 2062 201 88 11 chr5 167127016 167127450 -32502700 - MLT2B1 LTR ERVL -35 485 11 256 359 57 6 chr5 167127450 167127609 -32502541 + L1MEc LINE L1 217 383 -6013 192 333 17 42 chr5 167127884 167128004 -32502146 - MIR SINE MIR -13 249 133 346 273 68 0 chr5 167128929 167129017 -32501133 - L2 LINE L2 -5 3308 3215 347 263 179 34 chr5 167129045 167129280 -32500870 + MLT1I LTR MaLR 47 325 -84 7265 47 26 0 chr5 167129280 167130154 -32499996 - MER11D LTR ERVK 0 897 1 347 263 179 34 chr5 167130154 167130180 -32499970 + MLT1I LTR MaLR 325 346 -63 295 338 238 0 chr5 167132607 167132767 -32497383 + MIR SINE MIR 5 202 -60 1648 229 13 83 chr5 167132767 167133275 -32496875 + MLT2B1 LTR ERVL 1 469 -51 285 51 0 0 chr5 167133275 167133314 -32496836 + (CA)n Simple_repeat Simple_repeat 1 39 0 1648 229 13 83 chr5 167133314 167133356 -32496794 + MLT2B1 LTR ERVL 469 512 -8 214 296 0 0 chr5 167133361 167133415 -32496735 + MIR SINE MIR 199 252 -10 457 278 76 21 chr5 167134439 167134730 -32495420 - L1ME4a LINE L1 -223 5898 5592 373 331 102 0 chr5 167134847 167134974 -32495176 - L2 LINE L2 -1 3271 3132 262 327 0 20 chr5 167135303 167135404 -32494746 - MIR SINE MIR -29 233 135 1519 217 59 6 chr5 167135630 167136041 -32494109 + L1MB5 LINE L1 5738 6174 0 313 253 103 0 chr5 167136056 167136143 -32494007 + MER5A DNA MER1_type 91 186 -3 335 305 156 0 chr5 167136963 167137091 -32493059 - MIR SINE MIR -28 234 87 2195 99 0 45 chr5 167137339 167137651 -32492499 - AluSx SINE Alu -14 298 1 552 271 84 25 chr5 167137813 167138016 -32492134 + MIR SINE MIR 31 245 -17 503 235 191 22 chr5 167138971 167139154 -32490996 + MIR SINE MIR 49 262 0 2221 111 14 51 chr5 167139263 167139613 -32490537 + MER1B DNA MER1_type 1 337 0 309 51 0 0 chr5 167139747 167139786 -32490364 + (TG)n Simple_repeat Simple_repeat 1 39 0 299 379 48 24 chr5 167139944 167140195 -32489955 + L3 LINE CR1 1080 1336 -241 306 0 0 0 chr5 167140245 167140279 -32489871 + (TG)n Simple_repeat Simple_repeat 2 35 0 335 240 62 10 chr5 167140386 167140482 -32489668 - MIR SINE MIR 0 262 162 656 271 106 5 chr5 167140486 167140650 -32489500 + MIR SINE MIR 11 202 -60 326 91 0 202 chr5 167140650 167140749 -32489401 - MADE1 DNA Mariner 0 80 2 656 271 106 5 chr5 167140749 167140791 -32489359 + MIR SINE MIR 202 238 -24 604 274 9 37 chr5 167140826 167141041 -32489109 + MER63A DNA MER1_type 1 209 -1 374 330 26 16 chr5 167141326 167141520 -32488630 - MIR SINE MIR -65 197 2 644 272 33 62 chr5 167141986 167142229 -32487921 + MIR SINE MIR 26 261 -1 40781 32 21 3 chr5 167142281 167148378 -32481772 + L1PA2 LINE L1 1 6210 0 295 219 110 0 chr5 167149232 167149305 -32480845 + MIR SINE MIR 75 155 -107 452 262 55 49 chr5 167150246 167150410 -32479740 + MIR3 SINE MIR 38 202 -6 933 194 60 43 chr5 167150544 167150896 -32479254 - MSTD LTR MaLR 0 396 1 740 303 17 13 chr5 167151997 167152235 -32477915 - MIR SINE MIR -20 242 4 472 227 34 103 chr5 167152324 167152500 -32477650 - MIR SINE MIR -56 206 45 259 313 207 60 chr5 167152521 167153135 -32477015 - L3 LINE CR1 -8 1569 866 484 250 162 0 chr5 167153467 167153615 -32476535 - MIR3 SINE MIR -21 187 16 291 237 21 32 chr5 167153626 167153719 -32476431 - MIR3 SINE MIR -39 169 78 183 100 0 0 chr5 167154702 167154732 -32475418 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 397 349 60 6 chr5 167155596 167155762 -32474388 - MIR SINE MIR -6 256 82 228 200 0 0 chr5 167155864 167155904 -32474246 + L2 LINE L2 3265 3304 -9 475 322 55 89 chr5 167156098 167156514 -32473636 + L2 LINE L2 2865 3266 -6 272 234 0 31 chr5 167157096 167157160 -32472990 - L2 LINE L2 -2 3270 3209 197 269 19 102 chr5 167157627 167157680 -32472470 + MIR3 SINE MIR 108 149 -59 787 223 17 6 chr5 167157680 167157855 -32472295 - MER5B DNA MER1_type -1 177 1 197 269 19 102 chr5 167157855 167157909 -32472241 + MIR3 SINE MIR 149 206 -2 440 283 35 41 chr5 167157915 167158060 -32472090 - MER5A DNA MER1_type 0 189 46 191 237 0 0 chr5 167158928 167158966 -32471184 + L3 LINE CR1 933 970 -607 395 298 15 53 chr5 167159065 167159196 -32470954 - MIR SINE MIR -113 149 24 423 350 137 44 chr5 167159197 167159563 -32470587 + L3 LINE CR1 970 1369 -208 466 336 88 0 chr5 167159581 167159798 -32470352 + MIR SINE MIR 22 257 -5 1030 279 55 20 chr5 167160076 167160636 -32469514 + L1ME3A LINE L1 4087 4666 -1480 218 170 19 19 chr5 167160713 167160766 -32469384 + (TA)n Simple_repeat Simple_repeat 2 54 0 227 200 17 0 chr5 167160766 167160826 -32469324 - L1MC4 LINE L1 -1342 6700 6640 7038 184 20 8 chr5 167161037 167163415 -32466735 + L1PA16 LINE L1 3638 6042 -124 4073 146 14 18 chr5 167163427 167164141 -32466009 + MER50 LTR ERV1 1 711 -23 370 261 17 9 chr5 167164141 167164256 -32465894 + L1PA16 LINE L1 6042 6157 -9 2236 246 105 29 chr5 167164272 167164476 -32465674 + L1ME3A LINE L1 4924 5111 -1059 2814 13 0 0 chr5 167164476 167164787 -32465363 + AluY SINE Alu 1 311 0 2236 246 105 29 chr5 167164787 167165734 -32464416 + L1ME3A LINE L1 5111 6162 -8 933 199 31 5 chr5 167165900 167166096 -32464054 - MER58A DNA MER1_type 0 224 24 203 340 31 10 chr5 167166108 167166205 -32463945 - L2 LINE L2 -559 2755 2657 4404 59 0 0 chr5 167166829 167167375 -32462775 - L1PA5 LINE L1 0 6154 5609 642 278 145 4 chr5 167168247 167168474 -32461676 + MIR SINE MIR 4 262 0 418 321 36 25 chr5 167169108 167169303 -32460847 + MIR3 SINE MIR 3 202 -6 268 274 94 17 chr5 167170119 167170236 -32459914 - MIR SINE MIR -135 127 2 204 67 0 0 chr5 167170983 167171013 -32459137 + (CA)n Simple_repeat Simple_repeat 2 31 0 313 264 160 16 chr5 167171055 167171180 -32458970 + MER117 DNA MER1_type 37 179 -18 1859 139 0 14 chr5 167171193 167171473 -32458677 + AluSx SINE Alu 19 294 -18 2490 116 41 8 chr5 167171659 167172022 -32458128 + THE1C LTR MaLR 1 375 0 839 243 29 0 chr5 167172179 167172352 -32457798 + MER5B DNA MER1_type 1 178 0 470 309 29 54 chr5 167172638 167172842 -32457308 - MIR3 SINE MIR -6 202 4 1067 299 111 34 chr5 167172854 167173721 -32456429 + L2 LINE L2 2336 3270 -43 311 148 0 45 chr5 167174743 167174831 -32455319 + (GGGGA)n Simple_repeat Simple_repeat 5 88 0 212 300 57 0 chr5 167174889 167174959 -32455191 - MIR3 SINE MIR -133 75 2 1850 164 0 23 chr5 167175046 167175351 -32454799 - AluSx SINE Alu -14 298 1 321 207 207 50 chr5 167175451 167175572 -32454578 + MIR SINE MIR 53 192 -70 214 351 0 0 chr5 167175728 167175805 -32454345 + G-rich Low_complexity Low_complexity 6 82 0 632 257 118 30 chr5 167175805 167176042 -32454108 - MIR SINE MIR -4 258 1 1076 182 39 13 chr5 167176256 167176487 -32453663 - L1MB4 LINE L1 0 6180 5944 240 349 18 0 chr5 167176802 167176914 -32453236 + MIR SINE MIR 11 127 -81 637 277 85 13 chr5 167177463 167177687 -32452463 + MIR SINE MIR 21 260 -2 778 302 121 27 chr5 167177785 167178408 -32451742 - L2 LINE L2 -231 3041 2356 826 122 31 75 chr5 167178516 167178800 -32451350 + MER1B DNA MER1_type 1 339 0 417 250 30 30 chr5 167178935 167179067 -32451083 + LTR16A LTR ERVL 319 450 0 188 250 0 0 chr5 167179245 167179289 -32450861 + MER5B DNA MER1_type 8 51 -127 1656 172 56 20 chr5 167179293 167179595 -32450555 + MER49 LTR ERV1 1 313 -610 6586 22 0 0 chr5 167179595 167180591 -32449559 - L1PA3 LINE L1 -535 5620 4625 4935 30 0 0 chr5 167180591 167181128 -32449022 + L1PA3 LINE L1 5616 6155 0 3270 179 11 22 chr5 167181128 167181760 -32448390 + MER49 LTR ERV1 299 923 0 314 261 0 0 chr5 167181760 167181825 -32448325 - MER5B DNA MER1_type -53 125 61 2023 196 47 13 chr5 167182111 167182494 -32447656 + MSTD LTR MaLR 1 396 0 262 309 13 59 chr5 167182495 167182647 -32447503 - MLT1K LTR MaLR -243 345 201 302 337 6 61 chr5 167182950 167183113 -32447037 - MIR3 SINE MIR -23 185 32 885 208 196 113 chr5 167183526 167183863 -32446287 + MSTD LTR MaLR 1 396 0 457 301 57 16 chr5 167183863 167183986 -32446164 + MIR3 SINE MIR 32 159 -49 516 215 90 25 chr5 167183993 167184193 -32445957 + MER113 DNA MER1_type? 7 219 -302 368 169 146 0 chr5 167184193 167184282 -32445868 + L1MA9 LINE L1 6173 6274 -38 218 239 23 34 chr5 167184853 167184941 -32445209 + CT-rich Low_complexity Low_complexity 1 87 0 184 233 23 0 chr5 167184966 167185009 -32445141 - L2 LINE L2 -14 3258 3215 329 325 35 49 chr5 167185536 167185739 -32444411 - MIR3 SINE MIR -6 202 3 543 205 0 0 chr5 167185819 167185941 -32444209 + L1MA4 LINE L1 6175 6296 -4 603 256 102 0 chr5 167186045 167186221 -32443929 - MIR SINE MIR -6 256 63 332 349 37 0 chr5 167186496 167186605 -32443545 + L2 LINE L2 3201 3313 0 296 238 16 0 chr5 167186872 167186935 -32443215 - L2 LINE L2 -17 3255 3192 448 284 28 28 chr5 167187294 167187435 -32442715 - L2 LINE L2 -1 3312 3172 196 253 74 84 chr5 167187710 167187805 -32442345 - MIR SINE MIR -122 140 47 2357 97 10 0 chr5 167187973 167188282 -32441868 + AluSx SINE Alu 1 312 0 200 229 189 66 chr5 167188961 167189083 -32441067 - MIR SINE MIR -77 185 49 218 345 17 17 chr5 167189559 167189675 -32440475 - MIR SINE MIR -46 216 101 415 281 137 56 chr5 167189711 167189996 -32440154 - L2 LINE L2 0 3313 3006 1848 158 60 14 chr5 167191050 167191398 -32438752 + MER31A LTR ERV1 122 485 0 257 320 75 34 chr5 167191622 167191769 -32438381 + MIR3 SINE MIR 3 155 -53 238 347 41 35 chr5 167192212 167192382 -32437768 + L2 LINE L2 2914 3084 -188 299 250 188 19 chr5 167192674 167192834 -32437316 + L2 LINE L2 2166 2352 -962 391 352 6 6 chr5 167193174 167193336 -32436814 + L3 LINE CR1 1390 1551 -26 616 288 62 29 chr5 167193448 167193688 -32436462 - MIR SINE MIR 0 262 15 283 270 111 48 chr5 167193875 167194001 -32436149 + MIR3 SINE MIR 40 173 -35 180 176 0 0 chr5 167194041 167194075 -32436075 + (TCTA)n Simple_repeat Simple_repeat 4 37 0 195 325 38 0 chr5 167194766 167194846 -32435304 + MIR SINE MIR 32 114 -94 15704 137 14 4 chr5 167195860 167198190 -32431960 - Tigger1 DNA MER2_type 0 2418 113 336 48 0 0 chr5 167198190 167198232 -32431918 + (CA)n Simple_repeat Simple_repeat 2 43 0 2939 60 8 16 chr5 167198232 167198602 -32431548 + L1PA8 LINE L1 5803 6169 -3 15704 137 14 4 chr5 167198602 167198664 -32431486 - Tigger1 DNA MER2_type -2304 114 1 364 212 66 102 chr5 167198696 167198833 -32431317 + L2 LINE L2 3182 3313 0 234 239 0 0 chr5 167198917 167198963 -32431187 + LTR6B LTR ERV1 98 143 -415 * 279 229 114 57 chr5 167198952 167199092 -32431058 + MER117 DNA MER1_type 50 197 0 270 0 0 0 chr5 167199146 167199176 -32430974 + (CA)n Simple_repeat Simple_repeat 2 31 0 323 288 51 17 chr5 167199336 167199454 -32430696 - MIR3 SINE MIR -8 200 79 389 245 47 0 chr5 167200667 167200773 -32429377 + L2 LINE L2 3153 3263 -9 597 256 103 22 chr5 167200912 167201135 -32429015 - MIR SINE MIR -10 252 12 439 302 41 18 chr5 167201442 167201611 -32428539 - L2 LINE L2 -558 2756 2584 1737 187 106 8 chr5 167201628 167201987 -32428163 - MSTD LTR MaLR -1 395 2 515 204 13 70 chr5 167202212 167202369 -32427781 + MER103 DNA DNA 1 148 -18 451 195 32 71 chr5 167203143 167203297 -32426853 + MER103 DNA DNA 1 148 -18 215 221 331 39 chr5 167203985 167204112 -32426038 - MIR3 SINE MIR -25 183 20 867 282 128 30 chr5 167204742 167205139 -32425011 + MLT1K LTR MaLR 40 475 -113 273 98 0 0 chr5 167205191 167205232 -32424918 + (ATGGTG)n Simple_repeat Simple_repeat 4 44 0 745 301 9 14 chr5 167205382 167205595 -32424555 + LTR16A LTR ERVL 134 345 -105 1653 218 84 34 chr5 167205789 167206275 -32423875 - MLT1F1 LTR MaLR 0 567 1 25 0 0 0 chr5 167206563 167206588 -32423562 + AT_rich Low_complexity Low_complexity 1 25 0 669 305 54 5 chr5 167206812 167207035 -32423115 - MIR SINE MIR 0 262 29 241 299 0 15 chr5 167207337 167207404 -32422746 - L2 LINE L2 -209 3063 2998 482 289 16 0 chr5 167208633 167208761 -32421389 + MIR SINE MIR 73 202 -60 188 330 226 0 chr5 167208949 167209064 -32421086 - MIR SINE MIR -6 256 116 235 281 98 126 chr5 167209540 167209786 -32420364 - L2 LINE L2 -250 3063 2825 2341 190 7 0 chr5 167209790 167210217 -32419933 - L1MA8 LINE L1 -891 5255 4826 4282 145 13 8 chr5 167210228 167210940 -32419210 + L1MA8 LINE L1 5254 5968 -323 1353 149 97 53 chr5 167210940 167211345 -32418805 + L1MA6 LINE L1 5874 6300 0 491 271 36 0 chr5 167211347 167211487 -32418663 - L2 LINE L2 -478 2836 2692 242 328 0 0 chr5 167211699 167211763 -32418387 + polypurine Low_complexity Low_complexity 1 64 0 242 203 0 16 chr5 167211897 167211961 -32418189 + CT-rich Low_complexity Low_complexity 3 65 0 462 276 37 84 chr5 167212363 167212660 -32417490 - L2 LINE L2 0 3313 3031 422 260 160 11 chr5 167212785 167212966 -32417184 - L2 LINE L2 -816 2498 2291 494 243 79 14 chr5 167213048 167213188 -32416962 - MLT1J LTR MaLR -117 394 246 319 284 95 17 chr5 167213989 167214105 -32416045 + L3 LINE CR1 1386 1510 -67 247 175 35 0 chr5 167214106 167214163 -32415987 + (TA)n Simple_repeat Simple_repeat 2 60 0 1678 130 24 0 chr5 167214173 167214426 -32415724 + MER7A DNA MER2_type 15 271 -75 2201 164 24 0 chr5 167214426 167214755 -32415395 - MER1B DNA MER1_type 0 337 1 393 119 90 0 chr5 167214757 167214824 -32415326 - MER113 DNA MER1_type? -203 318 246 260 210 130 20 chr5 167214860 167214960 -32415190 - MLT1H LTR MaLR -39 510 400 333 330 115 22 chr5 167214989 167215259 -32414891 - MLT1H LTR MaLR -225 324 30 444 216 131 21 chr5 167215287 167215523 -32414627 - MER113 DNA MER1_type? -255 266 5 507 217 0 0 chr5 167216241 167216324 -32413826 - Tigger3(Golem) DNA MER2_type 0 3029 2947 2298 168 9 0 chr5 167216324 167216658 -32413492 + MER1B DNA MER1_type 1 337 0 358 40 0 0 chr5 167216733 167216783 -32413367 + L1MA7 LINE L1 6241 6290 -1 557 200 74 7 chr5 167216789 167216924 -32413226 + MER113 DNA MER1_type? 302 445 -76 198 167 0 0 chr5 167217668 167217704 -32412446 + (TGGA)n Simple_repeat Simple_repeat 3 38 0 400 358 16 32 chr5 167217759 167217946 -32412204 - MER5A DNA MER1_type -2 187 4 548 308 96 24 chr5 167218133 167218341 -32411809 - MIR SINE MIR -12 250 28 871 252 103 13 chr5 167218551 167218785 -32411365 - MIR SINE MIR 0 262 8 240 301 108 11 chr5 167218822 167218915 -32411235 + MIR3 SINE MIR 101 202 -6 568 264 42 18 chr5 167219254 167219421 -32410729 + MIR SINE MIR 35 205 -57 211 154 26 0 chr5 167219432 167219471 -32410679 + (TAA)n Simple_repeat Simple_repeat 2 41 0 254 303 50 0 chr5 167219517 167219616 -32410534 - L3 LINE CR1 -52 1525 1422 212 313 90 15 chr5 167219934 167220001 -32410149 - MIR SINE MIR -190 72 1 368 291 0 47 chr5 167221117 167221244 -32408906 + MER5A DNA MER1_type 69 189 0 195 158 79 0 chr5 167222764 167222802 -32407348 - MIR SINE MIR -110 152 112 591 209 164 53 chr5 167223244 167223469 -32406681 + MIR SINE MIR 13 262 0 24 32 0 0 chr5 167223550 167223581 -32406569 + AT_rich Low_complexity Low_complexity 1 31 0 252 298 20 43 chr5 167223783 167223952 -32406198 - MIR SINE MIR -61 147 33 230 306 172 54 chr5 167223971 167224157 -32405993 - MIR SINE MIR -35 227 20 623 306 14 14 chr5 167224236 167224452 -32405698 + MIR SINE MIR 34 249 -13 404 293 33 13 chr5 167225534 167225684 -32404466 - L3 LINE CR1 -5 1572 1420 225 289 67 0 chr5 167225746 167225836 -32404314 - MLT1L LTR MaLR -80 535 440 310 261 44 94 chr5 167226332 167226512 -32403638 - L3 LINE CR1 -195 1382 1212 461 157 128 20 chr5 167226515 167226617 -32403533 + MIR SINE MIR 23 135 -127 764 234 13 6 chr5 167226626 167226784 -32403366 + MIR SINE MIR 76 234 -28 187 257 0 0 chr5 167226755 167226790 -32403360 + L2 LINE L2 3251 3285 -28 * 325 197 13 13 chr5 167226959 167227035 -32403115 - L3 LINE CR1 -704 873 798 1846 144 26 93 chr5 167227232 167227649 -32402501 + MLT1B LTR MaLR 2 390 0 260 122 0 0 chr5 167227651 167227692 -32402458 + LTR67 LTR ERVL 508 548 -9 299 309 21 21 chr5 167228078 167228175 -32401975 + MIR3 SINE MIR 76 172 -36 582 249 138 40 chr5 167229164 167229417 -32400733 - L2 LINE L2 -1 3312 3035 328 255 65 59 chr5 167229411 167229564 -32400586 + MIR3 SINE MIR 48 201 -7 * 187 393 37 9 chr5 167229987 167230094 -32400056 + MIR3 SINE MIR 15 124 -84 2309 116 7 0 chr5 167230278 167230588 -32399562 + AluSx SINE Alu 1 312 0 263 200 0 14 chr5 167230708 167230778 -32399372 + (TTA)n Simple_repeat Simple_repeat 3 71 0 2079 175 11 85 chr5 167231233 167231886 -32398264 + L1MB1 LINE L1 5206 5805 -363 1668 173 12 77 chr5 167231924 167232341 -32397809 + L1MB1 LINE L1 5776 6165 -3 1038 240 40 17 chr5 167232732 167233078 -32397072 + L1MA9 LINE L1 5914 6267 -45 397 260 48 10 chr5 167233101 167233205 -32396945 + MER5A DNA MER1_type 61 168 -21 2262 114 0 0 chr5 167233379 167233678 -32396472 - AluSq SINE Alu -14 299 1 2651 58 0 0 chr5 167233941 167234252 -32395898 + AluY SINE Alu 1 311 0 249 333 10 21 chr5 167234514 167234610 -32395540 - MIR SINE MIR -166 96 2 24 0 0 0 chr5 167234719 167234743 -32395407 + AT_rich Low_complexity Low_complexity 1 24 0 1787 78 39 8 chr5 167234816 167235074 -32395076 + L1PA10 LINE L1 5892 6157 -11 24 0 0 0 chr5 167235074 167235098 -32395052 + AT_rich Low_complexity Low_complexity 1 24 0 733 259 18 61 chr5 167235180 167235458 -32394692 - MER46C DNA MER2_type 0 338 73 410 314 17 35 chr5 167235536 167235708 -32394442 + MIR SINE MIR 78 246 -16 38 0 0 0 chr5 167235767 167235805 -32394345 + AT_rich Low_complexity Low_complexity 1 38 0 993 110 0 0 chr5 167235988 167236134 -32394016 - L1PA8 LINE L1 -2 6170 6025 512 338 50 10 chr5 167236192 167236393 -32393757 + MIR SINE MIR 20 228 -34 212 348 97 34 chr5 167236426 167236633 -32393517 + L3 LINE CR1 1349 1568 -9 426 346 31 40 chr5 167237630 167237858 -32392292 - MIR SINE MIR -4 258 33 196 267 53 40 chr5 167238543 167238618 -32391532 + MIR SINE MIR 55 130 -78 217 306 198 8 chr5 167239762 167239883 -32390267 - L2 LINE L2 0 3313 3170 608 308 113 35 chr5 167239906 167240306 -32389844 + L2 LINE L2 2474 2904 -410 233 311 47 28 chr5 167240576 167240682 -32389468 + L2 LINE L2 3160 3267 -5 21 0 0 0 chr5 167240855 167240876 -32389274 + AT_rich Low_complexity Low_complexity 1 21 0 332 367 9 9 chr5 167241346 167241455 -32388695 - MIR SINE MIR -63 145 37 282 200 160 0 chr5 167242409 167242484 -32387666 - L2 LINE L2 0 3313 3227 21 36 0 0 chr5 167242512 167242540 -32387610 + AT_rich Low_complexity Low_complexity 1 28 0 195 140 18 35 chr5 167243321 167243378 -32386772 + GA-rich Low_complexity Low_complexity 2 57 0 21 0 0 0 chr5 167244153 167244174 -32385976 + AT_rich Low_complexity Low_complexity 1 21 0 5652 57 37 6 chr5 167244278 167245056 -32385094 - L1PA7 LINE L1 0 6154 5353 4631 161 13 32 chr5 167245380 167246400 -32383750 - L1MB4 LINE L1 -1 6179 5186 285 29 0 0 chr5 167246589 167246623 -32383527 + (CAT)n Simple_repeat Simple_repeat 2 35 0 362 315 42 14 chr5 167246623 167246766 -32383384 - MIR SINE MIR -4 258 112 1225 236 75 17 chr5 167247238 167247585 -32382565 + MLT1A2 LTR MaLR 4 370 -4 272 333 54 10 chr5 167247988 167248120 -32382030 + MIR SINE MIR 47 183 -67 564 296 34 67 chr5 167248151 167248657 -32381493 + L1ME LINE L1 6 494 -5576 11376 136 17 7 chr5 167249029 167250922 -32379228 + Tigger1 DNA MER2_type 1 1912 -506 473 75 45 0 chr5 167251110 167251177 -32378973 + Tigger1 DNA MER2_type 1951 2020 -398 1218 192 42 63 chr5 167251288 167251478 -32378672 + L1ME1 LINE L1 5050 5243 -923 1940 126 0 21 chr5 167251478 167251788 -32378362 + AluSc SINE Alu 1 304 0 1218 192 42 63 chr5 167251788 167252077 -32378073 + L1ME1 LINE L1 5243 5505 -661 1663 243 35 13 chr5 167252077 167252534 -32377616 - MLT1C LTR MaLR 0 467 1 1218 192 42 63 chr5 167252534 167252643 -32377507 + L1ME1 LINE L1 5505 5615 -551 987 184 60 17 chr5 167252665 167252899 -32377251 + MLT1A1 LTR MaLR 1 244 -121 752 236 16 45 chr5 167252899 167253141 -32377009 + L1ME1 LINE L1 5914 6148 -18 1943 216 102 50 chr5 167253172 167253834 -32376316 + L1ME2 LINE L1 5438 6137 -27 1933 142 9 26 chr5 167253834 167254179 -32375971 - MER44D DNA MER2_type 0 609 1 1943 216 102 50 chr5 167254179 167254196 -32375954 + L1ME2 LINE L1 6137 6152 -12 224 297 0 16 chr5 167254209 167254273 -32375877 + MIR SINE MIR 194 256 -6 235 294 206 65 chr5 167254440 167254702 -32375448 - L3 LINE CR1 -7 1570 1272 674 149 8 0 chr5 167254731 167254852 -32375298 + MER96B DNA MER1_type? 1 122 -295 540 304 91 14 chr5 167255329 167255549 -32374601 - MIR SINE MIR -6 256 20 733 244 73 75 chr5 167255590 167256110 -32374040 + MER113 DNA MER1_type? 1 519 -2 342 390 6 12 chr5 167256198 167256367 -32373783 + MIR3 SINE MIR 35 202 -6 454 290 21 32 chr5 167256621 167256807 -32373343 + MIR SINE MIR 33 216 -46 213 314 69 39 chr5 167256906 167257008 -32373142 + MIR3 SINE MIR 87 191 -17 2071 143 0 7 chr5 167257110 167257417 -32372733 + AluJb SINE Alu 1 305 -7 943 273 84 25 chr5 167257515 167257640 -32372510 + MLT1K LTR MaLR 162 278 -310 279 0 0 0 chr5 167257640 167257671 -32372479 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 943 273 84 25 chr5 167257671 167257948 -32372202 + MLT1K LTR MaLR 278 588 0 359 250 10 10 chr5 167258365 167258469 -32371681 - Charlie8 DNA MER1_type -2240 177 74 450 0 0 0 chr5 167258780 167258830 -32371320 + (TG)n Simple_repeat Simple_repeat 2 51 0 678 328 112 28 chr5 167259591 167260054 -32370096 + L3 LINE CR1 1067 1568 -9 383 250 50 69 chr5 167260330 167260490 -32369660 + MIR SINE MIR 55 211 -51 322 167 0 48 chr5 167260496 167260580 -32369570 + MADE1 DNA Mariner 1 80 0 277 317 73 0 chr5 167260653 167260735 -32369415 + MIR SINE MIR 19 106 -102 369 153 0 0 chr5 167260749 167260821 -32369329 + (TGGA)n Simple_repeat Simple_repeat 3 74 0 433 254 56 56 chr5 167261202 167261399 -32368751 - MER20 DNA MER1_type -22 197 1 451 282 6 39 chr5 167261509 167261665 -32368485 - L2 LINE L2 -2 3311 3161 541 271 27 50 chr5 167261667 167261888 -32368262 - L2 LINE L2 -338 2976 2761 215 339 36 76 chr5 167261831 167262055 -32368095 + L2 LINE L2 2892 3106 -166 * 885 218 107 23 chr5 167262071 167262287 -32367863 + MIR SINE MIR 12 245 -17 230 407 28 28 chr5 167262296 167262441 -32367709 + L2 LINE L2 3108 3252 -20 256 273 29 0 chr5 167262565 167262646 -32367504 - MIR SINE MIR -63 145 94 272 333 81 46 chr5 167262797 167262971 -32367179 - MIR3 SINE MIR -28 180 1 219 333 67 0 chr5 167263423 167263498 -32366652 - MIR SINE MIR -97 111 32 887 318 72 46 chr5 167263734 167264232 -32365918 - L2 LINE L2 -1 3271 2766 2381 61 3 7 chr5 167264590 167264884 -32365266 - AluY SINE Alu -18 293 1 308 258 65 11 chr5 167265333 167265426 -32364724 + MER33 DNA MER1_type 1 98 -226 1456 76 0 0 chr5 167265426 167265646 -32364504 + L1PA8 LINE L1 5952 6171 0 721 189 88 34 chr5 167265656 167265811 -32364339 + MER33 DNA MER1_type 113 287 -2337 720 136 0 0 chr5 167265811 167265929 -32364221 - L1PB4 LINE L1 -2 6154 6037 721 189 88 34 chr5 167265929 167266011 -32364139 + MER33 DNA MER1_type 287 363 0 585 320 17 0 chr5 167266126 167266304 -32363846 + MIR3 SINE MIR 21 201 -7 187 255 92 71 chr5 167266295 167266393 -32363757 - L3b LINE CR1 -45 1538 1439 * 484 249 75 55 chr5 167266586 167266634 -32363516 - MIR SINE MIR -10 252 206 1633 195 45 57 chr5 167266634 167267106 -32363044 + MLT1C LTR MaLR 1 466 -1 484 249 75 55 chr5 167267106 167267258 -32362892 - MIR SINE MIR -56 206 48 228 239 206 0 chr5 167267293 167267385 -32362765 + MIR3 SINE MIR 10 120 -88 184 314 47 47 chr5 167267445 167267531 -32362619 - L2 LINE L2 -802 2512 2427 204 283 0 0 chr5 167267689 167267735 -32362415 - MIR SINE MIR -113 149 104 238 331 138 30 chr5 167268483 167268752 -32361398 - L2 LINE L2 -889 2425 2128 * 359 246 21 134 chr5 167268742 167268822 -32361328 + MIR SINE MIR 86 135 -127 3768 148 58 20 chr5 167268822 167269563 -32360587 + L1MA8 LINE L1 5522 6290 -1 359 246 21 134 chr5 167269563 167269669 -32360481 + MIR SINE MIR 135 251 -11 293 354 63 30 chr5 167269748 167269985 -32360165 - L2 LINE L2 -1893 1421 1177 555 301 155 5 chr5 167270361 167270580 -32359570 + MIR SINE MIR 9 260 -2 188 277 92 0 chr5 167271224 167271289 -32358861 + L2 LINE L2 2909 2979 -293 950 317 27 22 chr5 167271624 167272028 -32358122 + L2 LINE L2 2004 2409 -905 40842 34 21 1 chr5 167272070 167278100 -32352050 - L1PA2 LINE L1 0 6155 1 1117 294 117 11 chr5 167278145 167278900 -32351250 + L2 LINE L2 2470 3303 -10 216 333 126 28 chr5 167279212 167279467 -32350683 + L2 LINE L2 1108 1387 -1927 707 330 39 50 chr5 167279502 167280048 -32350102 + L2 LINE L2 1597 2136 -1178 488 258 115 22 chr5 167280066 167280114 -32350036 + L2 LINE L2 3045 3087 -226 2465 82 0 3 chr5 167280114 167280420 -32349730 - AluSg SINE Alu -5 305 1 488 258 115 22 chr5 167280420 167280553 -32349597 + L2 LINE L2 3087 3243 -70 * 539 377 27 27 chr5 167280542 167280871 -32349279 + L2 LINE L2 2134 2462 -852 301 141 0 26 chr5 167280975 167281053 -32349097 + (TA)n Simple_repeat Simple_repeat 2 77 0 1892 133 14 0 chr5 167281070 167281348 -32348802 - AluSx SINE Alu -30 282 1 305 324 68 51 chr5 167281513 167281877 -32348273 + L2 LINE L2 2678 3048 -224 437 216 82 0 chr5 167281976 167282110 -32348040 - L1MB7 LINE L1 0 6184 6040 31 58 0 0 chr5 167282345 167282397 -32347753 + AT_rich Low_complexity Low_complexity 1 52 0 272 370 50 0 chr5 167282813 167282913 -32347237 + MIR SINE MIR 29 133 -75 431 147 13 0 chr5 167283765 167283840 -32346310 + L1ME LINE L1 5545 5620 -546 449 276 7 62 chr5 167283984 167284129 -32346021 + L2 LINE L2 3136 3272 0 185 208 167 0 chr5 167284857 167284905 -32345245 + L2 LINE L2 3253 3308 -5 3236 224 23 39 chr5 167285068 167286321 -32343829 + L1ME1 LINE L1 4921 6146 -20 24 0 0 0 chr5 167286384 167286408 -32343742 + AT_rich Low_complexity Low_complexity 1 24 0 640 192 11 99 chr5 167286408 167286590 -32343560 - MIR SINE MIR 0 262 97 306 329 66 12 chr5 167286690 167286857 -32343293 + MIR3 SINE MIR 30 205 -3 263 317 77 10 chr5 167287192 167287296 -32342854 + MIR SINE MIR 107 217 -45 210 300 0 0 chr5 167287378 167287438 -32342712 - MIR SINE MIR -128 134 75 2209 126 3 0 chr5 167287457 167287766 -32342384 + AluSg SINE Alu 1 310 0 983 223 14 19 chr5 167288225 167288440 -32341710 + MER20 DNA MER1_type 6 219 0 363 277 92 23 chr5 167288567 167288697 -32341453 - MIR3 SINE MIR -58 150 12 335 284 0 0 chr5 167288802 167288876 -32341274 - MIR3 SINE MIR -10 198 125 461 287 101 43 chr5 167289295 167289623 -32340527 - L1ME4a LINE L1 -5 6116 5770 323 164 25 107 chr5 167290445 167290567 -32339583 - MER103 DNA DNA -10 156 45 279 0 0 0 chr5 167290986 167291017 -32339133 + (A)n Simple_repeat Simple_repeat 1 31 0 315 216 55 40 chr5 167291362 167291493 -32338657 + L1MC/D LINE L1 5513 5637 -484 1893 296 101 28 chr5 167291497 167292576 -32337574 - L2 LINE L2 -4 3309 2144 312 325 44 6 chr5 167292578 167292738 -32337412 + L1MC/D LINE L1 5633 5798 -2010 3902 221 49 12 chr5 167292782 167294507 -32335643 + L1MD2 LINE L1 4024 5835 -524 1867 166 30 0 chr5 167294507 167294845 -32335305 - MER7A DNA MER2_type 0 346 1 3902 221 49 12 chr5 167294845 167295172 -32334978 + L1MD2 LINE L1 5835 6149 -210 198 354 0 0 chr5 167295465 167295547 -32334603 - MIR SINE MIR -115 147 66 508 313 65 13 chr5 167295761 167295991 -32334159 - MIR SINE MIR -1 261 20 496 314 0 45 chr5 167296271 167296427 -32333723 - MIR3 SINE MIR -17 191 43 295 341 11 0 chr5 167296857 167296948 -32333202 - MIR3 SINE MIR -4 204 113 304 289 12 12 chr5 167297018 167297101 -32333049 + MIR SINE MIR 12 94 -168 288 215 62 0 chr5 167297188 167297253 -32332897 + Tigger2 DNA MER2_type 1 69 -2649 * 1982 145 137 2 chr5 167297237 167297631 -32332519 + Tigger2 DNA MER2_type 2267 2713 -5 265 227 15 15 chr5 167297637 167297703 -32332447 + LTR67 LTR ERVL 108 173 -384 * 566 285 48 43 chr5 167297644 167298067 -32332083 + MLT1L LTR MaLR 72 598 -17 233 318 68 0 chr5 167298081 167298169 -32331981 + MIR SINE MIR 85 178 -84 402 307 65 14 chr5 167298172 167298387 -32331763 - L2 LINE L2 -1 3312 3087 393 294 6 50 chr5 167298985 167299145 -32331005 + MIR3 SINE MIR 49 201 -7 335 277 9 71 chr5 167299482 167299594 -32330556 + MIR SINE MIR 2 106 -102 411 278 43 12 chr5 167299604 167299766 -32330384 + MLT1L LTR MaLR 108 274 -341 517 281 34 48 chr5 167299830 167300041 -32330109 + MLT1L LTR MaLR 293 605 -10 590 283 16 27 chr5 167300288 167300472 -32329678 + MIR3 SINE MIR 19 200 -8 1449 258 40 42 chr5 167301518 167301999 -32328151 - MER68 LTR ERV1 -80 482 3 504 269 78 62 chr5 167301999 167302255 -32327895 + MLT1L LTR MaLR 206 465 -150 279 280 24 71 chr5 167302371 167302539 -32327611 - L2 LINE L2 -66 3247 3088 259 194 48 0 chr5 167302569 167302631 -32327519 - MLT1H1 LTR MaLR -7 548 484 224 314 89 41 chr5 167302676 167302845 -32327305 - L2 LINE L2 -375 2939 2763 294 274 204 25 chr5 167302852 167303009 -32327141 + MIR SINE MIR 72 256 -6 224 274 124 18 chr5 167303074 167303187 -32326963 - MIR SINE MIR -65 143 19 394 260 107 40 chr5 167303477 167303627 -32326523 + MIR SINE MIR 72 231 -31 328 329 63 28 chr5 167303729 167303872 -32326278 + L2 LINE L2 2879 3026 -287 1907 162 47 6 chr5 167304008 167304367 -32325783 + THE1C LTR MaLR 1 374 -1 9180 122 31 41 chr5 167304368 167305956 -32324194 + THE1C-int LTR MaLR 1 1573 -7 1795 145 42 55 chr5 167305962 167306341 -32323809 + THE1C LTR MaLR 2 375 0 1007 125 24 0 chr5 167306479 167306647 -32323503 - L1MA4A LINE L1 -1 6302 6131 217 268 268 0 chr5 167307417 167307499 -32322651 - L2 LINE L2 -5 3308 3205 216 220 40 0 chr5 167308176 167308226 -32321924 - L2 LINE L2 -16 3256 3205 579 322 38 0 chr5 167308564 167308775 -32321375 + MIR SINE MIR 29 247 -15 249 314 32 90 chr5 167308813 167309001 -32321149 - L2 LINE L2 -96 3176 3000 552 268 49 45 chr5 167309097 167309343 -32320807 + HAL1 LINE L1 124 370 -2137 506 342 109 12 chr5 167309449 167309771 -32320379 + HAL1 LINE L1 369 721 -1786 5485 56 3 0 chr5 167309786 167310466 -32319684 + L1PA7 LINE L1 5473 6154 0 225 0 0 0 chr5 167310706 167310731 -32319419 + (TTTTTG)n Simple_repeat Simple_repeat 6 30 0 197 239 84 0 chr5 167310788 167310859 -32319291 - L2 LINE L2 -606 2708 2632 326 234 0 56 chr5 167311078 167311185 -32318965 - MER112 DNA MER1_type -12 248 148 3292 268 41 42 chr5 167311215 167312780 -32317370 + HAL1 LINE L1 778 2340 -167 453 214 0 39 chr5 167312941 167313044 -32317106 - MIR3 SINE MIR -41 167 69 829 271 54 45 chr5 167313633 167314073 -32316077 + L1MC4a LINE L1 5461 5800 -362 787 263 49 22 chr5 167315254 167315478 -32314672 + MIR SINE MIR 2 231 -31 712 224 151 58 chr5 167316269 167316734 -32313416 + MER113 DNA MER1_type? 13 520 -1 180 261 33 76 chr5 167316931 167317023 -32313127 + MIR3 SINE MIR 93 180 -28 1576 200 20 14 chr5 167317179 167317534 -32312616 - MER4D LTR ERV1 0 903 547 601 236 0 20 chr5 167317532 167317711 -32312439 - MER4E LTR ERV1 -588 284 1 * 1782 236 39 63 chr5 167317747 167318362 -32311788 + L1ME3 LINE L1 5555 6154 -8 308 302 57 39 chr5 167318755 167318901 -32311249 + MIR3 SINE MIR 3 157 -51 573 234 21 0 chr5 167320535 167320680 -32309470 - L1MA10 LINE L1 -7 6327 6180 1987 157 15 32 chr5 167320690 167321033 -32309117 - MER1B DNA MER1_type 0 337 1 630 316 31 4 chr5 167321147 167321375 -32308775 + MIR SINE MIR 29 262 0 265 320 196 61 chr5 167321381 167321744 -32308406 - L2 LINE L2 -52 3220 2809 184 250 19 19 chr5 167321744 167321796 -32308354 + L2 LINE L2 3209 3260 -12 221 207 69 0 chr5 167321848 167321906 -32308244 - MIR SINE MIR -115 93 32 1513 167 16 16 chr5 167322147 167322405 -32307745 + AluJo SINE Alu 36 293 -19 203 305 39 62 chr5 167323257 167323385 -32306765 - L2 LINE L2 -12 3301 3177 414 296 12 83 chr5 167323726 167323895 -32306255 + MIR SINE MIR 1 157 -105 2203 222 50 24 chr5 167323896 167324401 -32305749 + MLT1F LTR MaLR 25 542 0 273 277 50 30 chr5 167324402 167324503 -32305647 + MIR SINE MIR 159 261 -1 31334 116 13 59 chr5 167324632 167331103 -32299047 + L1PA8 LINE L1 13 6171 -1 428 246 100 15 chr5 167331367 167331497 -32298653 - MIR SINE MIR -98 164 24 250 272 37 25 chr5 167331993 167332074 -32298076 - MIR SINE MIR -30 232 151 507 243 171 13 chr5 167332366 167332518 -32297632 - MER5A DNA MER1_type 0 189 14 727 281 41 18 chr5 167332685 167332906 -32297244 - MIR SINE MIR -6 256 31 266 286 38 38 chr5 167332926 167333031 -32297119 + L3 LINE CR1 897 1001 -576 378 300 49 52 chr5 167333105 167333570 -32296580 - LTR33A LTR ERVL -4 517 14 545 354 97 17 chr5 167333585 167333989 -32296161 + L3 LINE CR1 1135 1570 -7 321 370 36 7 chr5 167334410 167334548 -32295602 + MIR SINE MIR 16 157 -105 752 228 110 72 chr5 167334876 167335166 -32294984 - MER102a DNA MER1_type 0 330 30 305 262 30 47 chr5 167335193 167335336 -32294814 - MIR SINE MIR -63 145 17 901 213 47 25 chr5 167335721 167335956 -32294194 - MIR SINE MIR -14 248 9 426 289 74 7 chr5 167335967 167336102 -32294048 - MIR SINE MIR -62 200 57 26 0 0 0 chr5 167336438 167336464 -32293686 + AT_rich Low_complexity Low_complexity 1 26 0 2165 121 3 0 chr5 167336506 167336804 -32293346 - AluSq SINE Alu -14 299 1 203 323 0 16 chr5 167337282 167337344 -32292806 - MIR SINE MIR -179 83 23 381 284 63 8 chr5 167337678 167337805 -32292345 + MLT1L LTR MaLR 149 282 -333 475 269 85 30 chr5 167337869 167338070 -32292080 + MLT1L LTR MaLR 394 605 -10 2762 111 16 0 chr5 167338337 167338706 -32291444 - THE1C LTR MaLR 0 375 1 265 316 94 26 chr5 167338723 167338840 -32291310 + MIR SINE MIR 16 140 -68 339 255 52 25 chr5 167338841 167338999 -32291151 + L1MC4a LINE L1 5570 5725 -396 576 202 10 129 chr5 167339025 167339218 -32290932 + MER58C DNA MER1_type 28 197 -18 236 339 26 0 chr5 167339276 167339391 -32290759 + L1MC4a LINE L1 5812 5929 -1879 247 273 27 45 chr5 167339399 167339509 -32290641 + HAL1 LINE L1 2323 2430 -77 183 282 127 0 chr5 167339723 167339794 -32290356 - MIR SINE MIR -71 191 112 279 325 0 0 chr5 167340136 167340216 -32289934 + MIR3 SINE MIR 81 160 -48 538 264 81 30 chr5 167340246 167340443 -32289707 - MER102a DNA MER1_type -16 314 108 676 272 140 25 chr5 167341631 167341866 -32288284 - MIR SINE MIR 0 262 1 319 303 98 8 chr5 167341889 167342011 -32288139 + MIR3 SINE MIR 15 147 -61 236 98 0 98 chr5 167343146 167343187 -32286963 + MLT1B LTR MaLR 1 37 -353 312 287 33 33 chr5 167343411 167343533 -32286617 + MIR3 SINE MIR 68 189 -19 1856 164 11 3 chr5 167344041 167344327 -32285823 + AluSx SINE Alu 1 288 -24 387 311 8 17 chr5 167344342 167344461 -32285689 + MIR SINE MIR 32 149 -59 412 200 32 21 chr5 167344796 167344891 -32285259 + MLT1K LTR MaLR 432 527 -61 250 304 234 10 chr5 167345337 167345538 -32284612 - MIR SINE MIR -12 250 5 339 250 0 12 chr5 167345793 167345873 -32284277 - MIR SINE MIR -167 95 17 1405 246 50 13 chr5 167345881 167346337 -32283813 + MER113 DNA MER1_type? 1 473 -48 342 314 79 21 chr5 167346740 167346880 -32283270 - MIR3 SINE MIR -11 197 50 306 116 0 0 chr5 167346943 167346986 -32283164 + 5S rRNA rRNA 1 43 -78 224 378 9 18 chr5 167348694 167348805 -32281345 + MIR SINE MIR 33 142 -66 400 351 53 31 chr5 167348989 167349429 -32280721 - L2 LINE L2 -212 3060 2613 2165 234 41 22 chr5 167349560 167350069 -32280081 - LTR40a LTR ERVL 0 519 1 180 303 48 87 chr5 167350561 167350769 -32279381 - MIR SINE MIR -13 249 50 213 178 0 22 chr5 167351589 167351634 -32278516 - MIR SINE MIR -102 160 117 957 242 78 61 chr5 167351634 167351993 -32278157 + MLT1A1 LTR MaLR 1 365 0 7454 210 60 46 chr5 167351993 167353385 -32276765 + MLT1A1-int LTR MaLR 1 1423 -312 2431 94 0 3 chr5 167353385 167353693 -32276457 + AluSc SINE Alu 1 307 -2 7454 210 60 46 chr5 167353693 167354011 -32276139 + MLT1A1-int LTR MaLR 1423 1735 0 517 188 0 0 chr5 167354011 167354091 -32276059 + MLT1A1 LTR MaLR 1 80 -316 843 178 0 122 chr5 167354315 167354545 -32275605 + MLT1A1 LTR MaLR 164 365 0 263 352 19 37 chr5 167354545 167354653 -32275497 - MIR SINE MIR -86 122 17 252 372 80 7 chr5 167354714 167354851 -32275299 - L2 LINE L2 -6 3307 3161 330 342 135 58 chr5 167355036 167355758 -32274392 - L2 LINE L2 -472 2842 2014 991 170 80 11 chr5 167355758 167355946 -32274204 + MER105 DNA DNA 3 203 -1 330 342 135 58 chr5 167355946 167356258 -32273892 - L2 LINE L2 -1300 2014 1728 234 128 0 0 chr5 167356428 167356467 -32273683 + (TC)n Simple_repeat Simple_repeat 2 40 0 182 381 42 12 chr5 167356555 167356723 -32273427 - L2 LINE L2 -1900 1414 1242 337 299 0 28 chr5 167357345 167357452 -32272698 - L2 LINE L2 -32 3281 3178 423 345 66 18 chr5 167357757 167357931 -32272219 - L3 LINE CR1 -12 1565 1376 2345 88 0 7 chr5 167357931 167358228 -32271922 + AluY SINE Alu 1 295 -16 423 345 66 18 chr5 167358228 167358279 -32271871 - L3 LINE CR1 -201 1376 1329 309 316 58 7 chr5 167359750 167359905 -32270245 - MIR3 SINE MIR -5 203 41 410 320 132 18 chr5 167360914 167361133 -32269017 - MIR SINE MIR -14 248 5 588 350 27 0 chr5 167362230 167362487 -32267663 - Charlie8 DNA MER1_type -2153 264 1 539 243 18 53 chr5 167362825 167362994 -32267156 + MIR SINE MIR 50 212 -50 489 245 126 72 chr5 167363171 167363383 -32266767 + L1ME4a LINE L1 5600 5799 -322 2908 39 6 0 chr5 167363383 167363718 -32266432 + L1PA4 LINE L1 5815 6151 -4 189 0 0 0 chr5 167363723 167363744 -32266406 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 489 245 126 72 chr5 167363744 167364010 -32266140 + L1ME4a LINE L1 5802 6110 -11 184 191 0 64 chr5 167364431 167364478 -32265672 - L2 LINE L2 -2 3311 3268 * 416 274 140 34 chr5 167364448 167364676 -32265474 - MIR SINE MIR -10 252 3 240 250 13 40 chr5 167364911 167364987 -32265163 + MIR SINE MIR 45 118 -90 486 297 154 41 chr5 167365022 167365623 -32264527 + L2 LINE L2 2619 3288 -25 241 211 178 66 chr5 167366508 167366567 -32263583 - MIR SINE MIR -50 212 161 1115 264 184 23 chr5 167366567 167367002 -32263148 - MLT1D LTR MaLR 0 505 1 241 211 178 66 chr5 167367002 167367133 -32263017 - MIR SINE MIR -101 161 17 4041 127 26 18 chr5 167367135 167367742 -32262408 - LTR9 LTR ERV1 0 612 1 2239 118 16 12 chr5 167367742 167368065 -32262085 + L1PA10 LINE L1 5845 6168 0 186 265 44 73 chr5 167368189 167368257 -32261893 - MIR SINE MIR -78 130 65 1698 189 72 15 chr5 167368517 167368918 -32261232 + LTR37A LTR ERV1 1 424 -2 1180 112 0 18 chr5 167369073 167369242 -32260908 - AluSp SINE Alu -5 308 143 242 317 122 24 chr5 167369462 167369585 -32260565 - MIR3 SINE MIR -25 183 49 291 321 98 26 chr5 167369609 167369802 -32260348 + MIR SINE MIR 48 254 -8 409 219 10 10 chr5 167369978 167370074 -32260076 - MIR SINE MIR -19 243 148 808 266 81 101 chr5 167370081 167370597 -32259553 + MLT1J LTR MaLR 1 506 -5 228 269 149 37 chr5 167370599 167370733 -32259417 - MIR SINE MIR -113 149 1 275 234 32 106 chr5 167370917 167371011 -32259139 + MIR3 SINE MIR 116 202 -6 250 320 39 13 chr5 167371071 167371149 -32259001 - L3 LINE CR1 -68 1509 1430 227 297 125 0 chr5 167371159 167371223 -32258927 + L2 LINE L2 3201 3272 0 265 352 60 34 chr5 167371494 167371727 -32258423 - MIR SINE MIR -19 243 5 1042 97 8 0 chr5 167372247 167372381 -32257769 + AluSq/x SINE Alu 1 135 -178 2040 123 10 0 chr5 167372381 167372674 -32257476 + AluSx SINE Alu 1 296 -16 348 285 88 11 chr5 167372717 167372910 -32257240 + MIR SINE MIR 48 262 0 15557 128 29 18 chr5 167373059 167374945 -32255205 + Tigger1 DNA MER2_type 2 1864 -554 501 17 0 0 chr5 167374945 167375003 -32255147 + (TA)n Simple_repeat Simple_repeat 1 58 0 15557 128 29 18 chr5 167375003 167375172 -32254978 + Tigger1 DNA MER2_type 1864 2030 -388 2147 103 0 10 chr5 167375172 167375472 -32254678 + AluY SINE Alu 1 297 -14 15557 128 29 18 chr5 167375472 167375804 -32254346 + Tigger1 DNA MER2_type 2030 2418 0 757 300 65 45 chr5 167375919 167376663 -32253487 + L2 LINE L2 2544 3313 0 222 91 0 0 chr5 167376976 167377009 -32253141 + (A)n Simple_repeat Simple_repeat 1 33 0 255 212 41 0 chr5 167378205 167378260 -32251890 - MIR SINE MIR -78 130 73 1031 178 16 26 chr5 167378494 167378685 -32251465 - MER5A DNA MER1_type 0 189 1 584 269 139 67 chr5 167378761 167379107 -32251043 + MLT1L LTR MaLR 231 601 -14 189 0 0 0 chr5 167379593 167379614 -32250536 + (A)n Simple_repeat Simple_repeat 1 21 0 2576 71 0 0 chr5 167379667 167379978 -32250172 + AluY SINE Alu 1 311 0 309 253 60 12 chr5 167379981 167380064 -32250086 - MER103 DNA DNA -78 88 2 212 206 0 0 chr5 167380195 167380229 -32249921 + MIR SINE MIR 44 77 -185 413 180 213 0 chr5 167380231 167380353 -32249797 + MER104 DNA Tc2 8 155 -25 388 203 301 0 chr5 167380402 167380535 -32249615 + MIR SINE MIR 86 258 -4 320 203 114 0 chr5 167381334 167381413 -32248737 + MIR SINE MIR 63 150 -112 410 283 25 12 chr5 167381675 167381882 -32248268 + L1ME4a LINE L1 5726 5887 -234 2929 66 13 19 chr5 167382071 167382448 -32247702 - THE1C LTR MaLR 0 375 1 400 265 118 0 chr5 167383126 167383296 -32246854 + L1ME4a LINE L1 5476 5665 -456 219 292 15 0 chr5 167383317 167383382 -32246768 + MIR SINE MIR 155 220 -42 400 314 55 19 chr5 167383582 167383853 -32246297 + L1ME4a LINE L1 5645 5925 -196 546 365 37 12 chr5 167384095 167384336 -32245814 + MIR SINE MIR 9 255 -7 304 244 18 2 chr5 167384354 167384432 -32245718 - MIR3 SINE MIR -54 154 90 222 186 23 0 chr5 167385052 167385095 -32245055 - L2 LINE L2 -16 3297 3254 * 518 290 55 21 chr5 167385090 167385235 -32244915 - MIR SINE MIR -101 161 12 219 204 41 0 chr5 167385393 167385442 -32244708 + L2 LINE L2 3263 3313 0 * 277 284 18 46 chr5 167385428 167385537 -32244613 - MIR3 SINE MIR -6 202 97 480 297 63 50 chr5 167385848 167386467 -32243683 + L1M4 LINE L1 2540 3166 -2980 1006 278 95 48 chr5 167386606 167387814 -32242336 + L1M4 LINE L1 3371 4635 -1511 398 310 34 59 chr5 167388356 167388595 -32241555 + MLT1K LTR MaLR 216 448 -140 1081 0 0 0 chr5 167388595 167388712 -32241438 - L1HS LINE L1 -6 6149 6033 316 269 41 69 chr5 167388712 167388857 -32241293 + MLT1K LTR MaLR 439 579 -9 232 333 119 0 chr5 167388869 167388953 -32241197 + MER5A DNA MER1_type 93 186 -3 429 320 126 65 chr5 167389034 167389320 -32240830 + L2 LINE L2 2807 3135 -178 2068 115 49 0 chr5 167389320 167389607 -32240543 - AluSx SINE Alu -11 301 1 429 320 126 65 chr5 167389607 167389798 -32240352 + L2 LINE L2 3135 3313 0 849 55 0 0 chr5 167389865 167389974 -32240176 + AluY SINE Alu 195 303 -8 443 282 13 34 chr5 167390804 167390953 -32239197 - L2 LINE L2 -17 3296 3151 218 284 68 0 chr5 167391530 167391600 -32238550 - L2 LINE L2 -370 2944 2870 581 247 133 6 chr5 167391600 167391766 -32238384 + MER5A DNA MER1_type 2 188 -1 261 374 0 0 chr5 167391873 167391956 -32238194 + L2 LINE L2 3190 3272 0 194 270 63 0 chr5 167392826 167392889 -32237261 - L3b LINE CR1 -198 1385 1319 236 288 0 15 chr5 167393186 167393252 -32236898 + L3 LINE CR1 1390 1454 -123 600 274 43 6 chr5 167393538 167393702 -32236448 - MIR SINE MIR -79 183 14 190 107 0 0 chr5 167394240 167394268 -32235882 - MIR SINE MIR -117 145 118 184 128 26 26 chr5 167394898 167394937 -32235213 + L2 LINE L2 3274 3312 -1 548 101 0 13 chr5 167395736 167395815 -32234335 - MADE1 DNA Mariner -2 78 1 284 272 95 34 chr5 167396130 167396277 -32233873 + MIR SINE MIR 6 161 -101 22 56 0 0 chr5 167397087 167397123 -32233027 + AT_rich Low_complexity Low_complexity 1 36 0 721 279 37 29 chr5 167397138 167397382 -32232768 - MIR SINE MIR -11 251 6 289 320 10 0 chr5 167397430 167397530 -32232620 - MIR SINE MIR -13 249 149 207 0 0 0 chr5 167397572 167397595 -32232555 + (A)n Simple_repeat Simple_repeat 1 23 0 399 289 23 31 chr5 167398141 167398269 -32231881 - MIR SINE MIR -63 145 19 315 297 24 24 chr5 167398735 167398900 -32231250 + L1ME3A LINE L1 5793 5957 -213 34 0 0 0 chr5 167399157 167399191 -32230959 + AT_rich Low_complexity Low_complexity 1 34 0 2492 72 0 3 chr5 167399201 167399506 -32230644 + AluY SINE Alu 1 304 -7 254 268 31 41 chr5 167399837 167399934 -32230216 + MLT1K LTR MaLR 160 255 -333 800 204 67 44 chr5 167400160 167400385 -32229765 + LTR67 LTR ERVL 320 549 -8 238 325 77 43 chr5 167400699 167400816 -32229334 - MIR SINE MIR -63 145 25 1117 254 68 0 chr5 167400853 167401089 -32229061 - MIR SINE MIR -4 258 7 473 181 38 0 chr5 167402365 167402470 -32227680 + L1MB7 LINE L1 6073 6181 -3 43850 28 22 2 chr5 167402525 167408527 -32221623 - L1HS LINE L1 0 6155 32 384 309 170 5 chr5 167408777 167408965 -32221185 + MIR SINE MIR 20 238 -24 409 357 35 0 chr5 167409555 167409698 -32220452 + MIR3 SINE MIR 18 165 -43 1214 266 39 12 chr5 167410103 167410434 -32219716 + MLT1C LTR MaLR 125 464 -3 511 261 131 7 chr5 167410449 167410602 -32219548 + MER117 DNA MER1_type 25 196 -1 185 299 219 31 chr5 167411645 167411869 -32218281 + L2 LINE L2 2537 2802 -512 422 230 267 0 chr5 167411909 167412096 -32218054 - MER5C DNA MER1_type -87 237 1 328 292 40 121 chr5 167412206 167412627 -32217523 + L2 LINE L2 2920 3306 -7 295 273 71 0 chr5 167413240 167413339 -32216811 + MIR3 SINE MIR 70 175 -33 291 272 130 0 chr5 167413422 167413514 -32216636 - L2 LINE L2 0 3272 3169 337 235 165 0 chr5 167413905 167414020 -32216130 + L2 LINE L2 3180 3313 0 218 310 121 0 chr5 167414953 167415011 -32215139 + L2 LINE L2 3208 3272 -41 464 356 113 0 chr5 167415100 167415322 -32214828 - MIR SINE MIR -8 254 8 534 258 23 135 chr5 167415478 167415738 -32214412 + L2 LINE L2 3028 3258 -14 259 200 0 0 chr5 167416553 167416598 -32213552 + MIR SINE MIR 41 85 -123 586 172 0 0 chr5 167416684 167416771 -32213379 + AluJ/FLAM SINE Alu 2 88 -224 973 327 98 55 chr5 167416796 167417802 -32212348 - L2 LINE L2 -2 3270 2218 359 294 71 16 chr5 167418028 167418154 -32211996 - MIR SINE MIR -113 149 17 219 265 214 0 chr5 167418500 167418598 -32211552 + MIR SINE MIR 71 189 -73 292 253 0 36 chr5 167419038 167419121 -32211029 - MIR SINE MIR -3 259 180 488 311 50 29 chr5 167419457 167419695 -32210455 - MIR SINE MIR -5 257 15 187 250 0 45 chr5 167419683 167419727 -32210423 - L3 LINE CR1 -30 1547 1506 * 399 90 0 60 chr5 167419802 167419869 -32210281 - L1PA7 LINE L1 0 6154 6092 419 234 0 11 chr5 167420253 167420347 -32209803 + MIR3 SINE MIR 106 198 -10 847 313 60 24 chr5 167420832 167421247 -32208903 + MLT1K LTR MaLR 159 588 0 877 299 111 35 chr5 167421635 167422350 -32207800 + L2 LINE L2 2531 3313 0 301 271 115 21 chr5 167423061 167423157 -32206993 + L2 LINE L2 3160 3264 -49 290 349 33 26 chr5 167423503 167423655 -32206495 + MIR3 SINE MIR 54 206 -2 587 270 240 10 chr5 167423819 167424023 -32206127 + MIR SINE MIR 7 257 -5 555 279 34 22 chr5 167424301 167424480 -32205670 - MIR3 SINE MIR -15 193 13 931 185 9 52 chr5 167424502 167424565 -32205585 + MER97a DNA MER1_type? 27 91 -803 2137 109 3 7 chr5 167424565 167424905 -32205245 - AluSx SINE Alu 0 339 1 931 185 9 52 chr5 167424905 167425072 -32205078 + MER97a DNA MER1_type? 91 248 -646 1618 228 73 48 chr5 167425091 167425442 -32204708 + MER97a DNA MER1_type? 364 734 -160 832 194 0 19 chr5 167425442 167425597 -32204553 + FRAM SINE Alu 2 153 -13 1618 228 73 48 chr5 167425597 167425763 -32204387 + MER97a DNA MER1_type? 734 894 0 655 294 72 21 chr5 167426330 167426565 -32203585 - MIR SINE MIR -7 255 9 388 266 28 28 chr5 167427178 167427321 -32202829 + MIR SINE MIR 112 254 -8 212 378 61 10 chr5 167427431 167427529 -32202621 + MIR SINE MIR 33 135 -73 216 259 36 80 chr5 167427647 167427759 -32202391 - MIR SINE MIR -72 136 30 502 239 168 13 chr5 167428072 167428227 -32201923 - MER5A DNA MER1_type -2 187 9 365 271 42 10 chr5 167428487 167428583 -32201567 + MIR3 SINE MIR 10 108 -100 276 234 280 9 chr5 167429130 167429237 -32200913 + MIR3 SINE MIR 11 146 -62 387 262 113 0 chr5 167429239 167429380 -32200770 - MIR SINE MIR 0 262 106 867 150 0 8 chr5 167429417 167429550 -32200600 - FLAM_A SINE Alu -1 132 1 217 334 0 25 chr5 167430744 167430824 -32199326 + MIR SINE MIR 75 151 -65 * 221 305 0 0 chr5 167430821 167430880 -32199270 - MIR SINE MIR -1 261 203 300 333 83 8 chr5 167430889 167431021 -32199129 + L3 LINE CR1 1170 1311 -266 545 300 82 5 chr5 167431034 167431254 -32198896 + MIR SINE MIR 20 256 -6 284 362 32 0 chr5 167431570 167431664 -32198486 + L2 LINE L2 3157 3253 -19 639 270 65 84 chr5 167431782 167432137 -32198013 + L2 LINE L2 2187 2534 -780 478 179 0 42 chr5 167432139 167432234 -32197916 + MER2 DNA MER2_type 2 92 -253 1605 170 91 0 chr5 167432239 167432515 -32197635 + AluJb SINE Alu 1 301 -11 5232 139 44 65 chr5 167432515 167433603 -32196547 + L1PB1 LINE L1 7 1071 -5792 13977 185 11 8 chr5 167433611 167437656 -32192494 + L1PB1 LINE L1 2459 6507 -360 330 87 0 0 chr5 167437656 167437702 -32192448 + (CA)n Simple_repeat Simple_repeat 2 47 0 13977 185 11 8 chr5 167437702 167438060 -32192090 + L1PB1 LINE L1 6507 6862 -5 1288 149 65 12 chr5 167438062 167438310 -32191840 + MER2 DNA MER2_type 85 345 0 421 345 60 5 chr5 167438310 167438510 -32191640 + L2 LINE L2 2534 2744 -570 2297 253 183 28 chr5 167438510 167439560 -32190590 - L2 LINE L2 -2 3311 2087 511 327 103 38 chr5 167439580 167440111 -32190039 + L2 LINE L2 2748 3308 -5 266 289 63 81 chr5 167440087 167440211 -32189939 - MIR SINE MIR -63 145 23 * 361 305 99 47 chr5 167440623 167440836 -32189314 - L2 LINE L2 0 3313 3090 402 278 9 19 chr5 167441455 167441563 -32188587 - MIR SINE MIR -153 109 3 207 225 56 56 chr5 167441564 167441635 -32188515 - MIR3 SINE MIR -27 181 111 389 308 47 0 chr5 167441654 167441761 -32188389 - L2 LINE L2 0 3313 3202 238 105 0 0 chr5 167441851 167441889 -32188261 - MLT2C1 LTR ERVL -2 395 358 240 169 34 34 chr5 167441894 167441953 -32188197 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1712 195 10 10 chr5 167441962 167442311 -32187839 - MLT2C1 LTR ERVL -50 347 5 1532 144 179 13 chr5 167442363 167442676 -32187474 + MLT1A1 LTR MaLR 1 365 0 1062 69 8 0 chr5 167442932 167443062 -32187088 - AluSp SINE Alu -182 131 1 294 29 0 0 chr5 167443207 167443242 -32186908 + (TG)n Simple_repeat Simple_repeat 2 36 0 321 270 37 79 chr5 167444088 167444303 -32185847 - L1ME3A LINE L1 -286 5884 5679 * 542 288 36 24 chr5 167444301 167444631 -32185519 - L1ME3A LINE L1 -1443 4703 4370 181 304 29 14 chr5 167444820 167444889 -32185261 + MIR SINE MIR 51 120 -142 570 307 118 36 chr5 167444950 167445390 -32184760 + MLT1H1 LTR MaLR 38 513 -42 29795 105 14 59 chr5 167445634 167452080 -32178070 + L1PA7 LINE L1 12 6152 -2 2244 105 3 6 chr5 167452238 167452551 -32177599 + AluSx SINE Alu 1 312 0 270 270 11 34 chr5 167453819 167453908 -32176242 - L2 LINE L2 0 3313 3227 222 295 86 38 chr5 167453985 167454090 -32176060 + L2 LINE L2 3189 3298 -15 221 277 31 0 chr5 167454140 167454205 -32175945 - L2 LINE L2 -206 3066 3000 495 275 91 67 chr5 167455497 167456126 -32174024 + HAL1b LINE L1 4 647 -701 1347 170 25 7 chr5 167456270 167456553 -32173597 + L1M2 LINE L1 2183 2470 -4379 2077 127 10 0 chr5 167456554 167456845 -32173305 + AluSx SINE Alu 1 294 -18 3660 151 93 4 chr5 167456847 167457578 -32172572 + L1MA5A LINE L1 5498 6293 -4 246 281 42 0 chr5 167457820 167457916 -32172234 + L1ME LINE L1 5559 5658 -463 28957 113 9 62 chr5 167457934 167459497 -32170653 + L1PA7 LINE L1 12 1657 -4497 2165 117 3 0 chr5 167459497 167459787 -32170363 + AluSg SINE Alu 1 291 -19 28957 113 9 62 chr5 167459787 167464717 -32165433 + L1PA7 LINE L1 1657 6151 -3 21 36 0 0 chr5 167465004 167465032 -32165118 + AT_rich Low_complexity Low_complexity 1 28 0 670 299 106 34 chr5 167465042 167465402 -32164748 - HAL1b LINE L1 -26 1322 989 2298 74 0 7 chr5 167465402 167465699 -32164451 + AluY SINE Alu 1 295 -16 670 299 106 34 chr5 167465699 167466101 -32164049 - HAL1b LINE L1 -359 989 505 27 0 0 0 chr5 167466425 167466452 -32163698 + AT_rich Low_complexity Low_complexity 1 27 0 182 244 0 141 chr5 167466475 167466553 -32163597 + MIR3 SINE MIR 106 172 -36 461 243 128 105 chr5 167466656 167466892 -32163258 - Charlie8 DNA MER1_type -1956 461 211 2496 73 0 16 chr5 167466892 167467207 -32162943 - AluY SINE Alu -1 310 1 461 243 128 105 chr5 167467207 167467378 -32162772 - Charlie8 DNA MER1_type -2206 211 45 335 315 45 18 chr5 167467842 167467953 -32162197 - MIR SINE MIR -65 143 30 3118 247 69 31 chr5 167468362 167469600 -32160550 + L1ME1 LINE L1 37 1297 -4918 2324 196 31 0 chr5 167469600 167470053 -32160097 - MLT1C LTR MaLR 0 467 1 3118 247 69 31 chr5 167470053 167470164 -32159986 + L1ME1 LINE L1 1297 1402 -4813 311 304 0 11 chr5 167470191 167470283 -32159867 + L1MC4 LINE L1 6614 6704 -1338 299 148 0 16 chr5 167470302 167470363 -32159787 + (TA)n Simple_repeat Simple_repeat 1 60 0 1606 231 80 80 chr5 167470383 167470535 -32159615 + L1ME1 LINE L1 1483 1634 -4762 1913 161 0 3 chr5 167470535 167470826 -32159324 + AluSx SINE Alu 1 290 -22 1606 231 80 80 chr5 167470826 167471510 -32158640 + L1ME1 LINE L1 1634 2317 -4079 2303 81 14 7 chr5 167471510 167471786 -32158364 + AluSc SINE Alu 1 281 -28 288 0 0 0 chr5 167471786 167471818 -32158332 + (CA)n Simple_repeat Simple_repeat 1 32 0 2303 81 14 7 chr5 167471818 167471838 -32158312 + AluSc SINE Alu 281 299 -10 1606 231 80 80 chr5 167471838 167471873 -32158277 + L1ME1 LINE L1 2317 2358 -4038 659 159 79 0 chr5 167471873 167471999 -32158151 + L1PA15 LINE L1 6025 6160 -5 1606 231 80 80 chr5 167471999 167472012 -32158138 + L1ME1 LINE L1 2357 2369 -4027 296 196 101 43 chr5 167472187 167472325 -32157825 + MER113 DNA MER1_type? 31 176 -345 854 246 4 43 chr5 167472339 167472595 -32157555 + L1MB8 LINE L1 5921 6166 -12 291 172 0 0 chr5 167472602 167472666 -32157484 - MER20B DNA MER1_type -117 666 603 249 158 158 49 chr5 167472676 167472758 -32157392 + MER113 DNA MER1_type? 220 310 -211 3071 169 46 25 chr5 167472775 167473490 -32156660 + L1MB7 LINE L1 5446 6175 -9 3842 230 67 39 chr5 167473534 167475062 -32155088 + L1ME1 LINE L1 2315 3886 -2329 745 214 104 9 chr5 167475054 167475274 -32154876 + L1ME1 LINE L1 5715 5955 -280 * 3194 146 69 50 chr5 167475290 167476043 -32154107 + L1MA4 LINE L1 5534 6300 0 684 228 14 116 chr5 167476054 167476348 -32153802 + L1ME1 LINE L1 5967 6230 -5 274 342 84 19 chr5 167477852 167478007 -32152143 - MIR3 SINE MIR -16 192 28 991 190 6 6 chr5 167478782 167478956 -32151194 - FAM SINE Alu -1 174 1 416 366 21 16 chr5 167479446 167479632 -32150518 + MIR3 SINE MIR 16 202 -6 196 191 95 0 chr5 167479627 167479669 -32150481 + MIR SINE MIR 54 99 -109 * 537 278 94 21 chr5 167479678 167479869 -32150281 + MIR SINE MIR 44 248 -14 182 358 42 11 chr5 167480490 167480585 -32149565 - MIR SINE MIR -88 120 23 200 271 54 36 chr5 167481759 167481854 -32148296 + MIR SINE MIR 82 179 -83 448 301 77 26 chr5 167481879 167482035 -32148115 + MIR SINE MIR 11 174 -88 224 283 0 0 chr5 167482064 167482110 -32148040 + MIR SINE MIR 12 57 -205 211 253 11 84 chr5 167482118 167482213 -32147937 + MIR SINE MIR 175 262 0 261 250 0 0 chr5 167482228 167482288 -32147862 + MIR SINE MIR 203 262 0 514 313 31 6 chr5 167482656 167482819 -32147331 - MIR3 SINE MIR -32 176 10 1811 161 52 73 chr5 167484314 167484755 -32145395 + MSTB1 LTR MaLR 1 432 0 924 198 63 24 chr5 167484972 167485179 -32144971 - MER20 DNA MER1_type -4 215 1 300 285 124 75 chr5 167485482 167485949 -32144201 + HAL1 LINE L1 885 1374 -1133 1667 193 3 7 chr5 167486187 167486477 -32143673 - AluJb SINE Alu -23 289 1 1289 310 52 12 chr5 167486923 167487522 -32142628 + L1M2 LINE L1 208 846 -6363 308 352 99 21 chr5 167487546 167487688 -32142462 + L1M2 LINE L1 1617 1769 -5440 5549 204 37 36 chr5 167487739 167489869 -32140281 + L1MA5 LINE L1 1616 3836 -3372 263 85 0 43 chr5 167489869 167489916 -32140234 + MER41A LTR ERV1 400 444 -110 5549 204 37 36 chr5 167489916 167490339 -32139811 + L1MA5 LINE L1 3836 4257 -2951 41637 45 4 0 chr5 167490355 167496488 -32133662 - L1PA4 LINE L1 -3 6152 3 8601 169 64 21 chr5 167496498 167496880 -32133270 + L1MA5 LINE L1 4268 4632 -2576 2029 123 0 0 chr5 167496880 167497156 -32132994 - AluSg SINE Alu -15 295 20 8601 169 64 21 chr5 167497156 167498130 -32132020 + L1MA5 LINE L1 4632 5747 -1461 1662 196 21 7 chr5 167498130 167498421 -32131729 + AluJo SINE Alu 1 295 -17 8601 169 64 21 chr5 167498421 167499156 -32130994 + L1MA5 LINE L1 5747 6449 -759 3459 229 66 19 chr5 167499193 167500169 -32129981 + L1PB1 LINE L1 6 1040 -5823 2291 114 10 0 chr5 167500169 167500477 -32129673 + AluSx SINE Alu 2 312 0 3459 229 66 19 chr5 167500477 167500598 -32129552 + L1PB1 LINE L1 1040 1154 -5709 13681 197 46 22 chr5 167500604 167501261 -32128889 + L1PB1 LINE L1 1311 1951 -4916 7524 32 1 1 chr5 167501261 167502422 -32127728 + L1PA4 LINE L1 4994 6155 0 13681 197 46 22 chr5 167502422 167507210 -32122940 + L1PB1 LINE L1 1951 6865 -2 4952 134 17 34 chr5 167507224 167508150 -32122000 + L1MA5 LINE L1 6450 7360 -2 1645 176 3 17 chr5 167508715 167509010 -32121140 + AluJb SINE Alu 1 291 -21 24 32 0 0 chr5 167509010 167509041 -32121109 + AT_rich Low_complexity Low_complexity 1 31 0 580 323 94 28 chr5 167509201 167509699 -32120451 + L1M4 LINE L1 2604 3134 -3012 441 220 10 0 chr5 167510480 167510580 -32119570 + L1ME LINE L1 5560 5660 -461 279 333 39 23 chr5 167510746 167510875 -32119275 - MER5A DNA MER1_type -7 182 52 * 344 317 39 10 chr5 167510772 167510876 -32119274 + MER5A DNA MER1_type 43 149 -40 480 300 99 8 chr5 167511142 167511385 -32118765 + Charlie8 DNA MER1_type 1 265 -2152 636 186 21 112 chr5 167511601 167511789 -32118361 + MER5B DNA MER1_type 8 178 0 771 286 44 7 chr5 167511845 167512094 -32118056 + MIR SINE MIR 5 250 -12 208 307 45 11 chr5 167512164 167512252 -32117898 - MIR SINE MIR -19 243 153 273 229 36 133 chr5 167512737 167512903 -32117247 + MIR3 SINE MIR 36 205 -3 2392 65 3 0 chr5 167513065 167513356 -32116794 - AluY SINE Alu -19 292 1 514 310 72 83 chr5 167513861 167514492 -32115658 + L2 LINE L2 2592 3223 -49 282 269 0 0 chr5 167514492 167514559 -32115591 + GA-rich Low_complexity Low_complexity 2 68 0 2364 95 0 0 chr5 167514752 167515056 -32115094 + AluSc SINE Alu 1 304 -5 286 352 63 21 chr5 167515309 167515451 -32114699 + L2 LINE L2 3125 3272 0 426 212 227 8 chr5 167515995 167516127 -32114023 - MER5A DNA MER1_type -3 186 26 4532 153 18 20 chr5 167516263 167517110 -32113040 + L1MA9 LINE L1 5453 6297 -15 317 376 23 0 chr5 167517850 167517983 -32112167 + L3 LINE CR1 937 1072 -505 * 651 264 40 44 chr5 167517979 167518040 -32112110 + L2 LINE L2 2681 2741 -531 3911 109 11 32 chr5 167518040 167518204 -32111946 + MER4B LTR ERV1 1 167 -443 2168 131 0 0 chr5 167518204 167518502 -32111648 + AluSx SINE Alu 1 298 -14 3911 109 11 32 chr5 167518502 167518960 -32111190 + MER4B LTR ERV1 167 610 0 651 264 40 44 chr5 167518960 167519278 -32110872 + L2 LINE L2 2741 3058 -214 532 313 52 39 chr5 167519351 167519581 -32110569 - MIR SINE MIR 0 262 30 388 297 40 0 chr5 167519616 167519717 -32110433 + L2 LINE L2 3168 3272 0 403 313 158 27 chr5 167519719 167519794 -32110356 + L3 LINE CR1 1110 1174 -403 2558 51 0 6 chr5 167519794 167520105 -32110045 + AluY SINE Alu 1 309 -2 403 313 158 27 chr5 167520105 167520364 -32109786 + L3 LINE CR1 1174 1488 -89 615 348 6 0 chr5 167520898 167521079 -32109071 - MIR3 SINE MIR -8 200 19 289 299 41 10 chr5 167521913 167522010 -32108140 + MIR SINE MIR 54 153 -109 654 251 68 9 chr5 167522218 167522437 -32107713 - Charlie8 DNA MER1_type -2147 270 39 805 236 11 11 chr5 167522918 167523100 -32107050 - MIR SINE MIR -25 237 56 1179 147 27 49 chr5 167523330 167523554 -32106596 - MER20 DNA MER1_type 0 219 1 498 138 0 0 chr5 167523870 167523950 -32106200 - MADE1 DNA Mariner 0 80 1 335 283 101 23 chr5 167524117 167524305 -32105845 - MIR SINE MIR -24 238 33 * 348 309 131 24 chr5 167524303 167524471 -32105679 + MIR3 SINE MIR 16 201 -7 313 293 176 11 chr5 167524957 167525145 -32105005 - MIR SINE MIR -42 220 2 931 307 100 39 chr5 167525156 167525271 -32104879 - L3 LINE CR1 -107 1470 1363 1599 75 0 10 chr5 167525271 167525470 -32104680 + MER107 DNA MER1_type 1 197 0 931 307 100 39 chr5 167525470 167525894 -32104256 - L3 LINE CR1 -214 1363 898 401 301 108 0 chr5 167526158 167526324 -32103826 - MIR SINE MIR 0 262 79 2514 80 17 20 chr5 167526357 167526706 -32103444 - THE1B LTR MaLR 0 364 17 450 285 51 7 chr5 167527697 167527834 -32102316 - MIR3 SINE MIR -40 168 26 1137 180 5 32 chr5 167527836 167528053 -32102097 - AluJb SINE Alu -15 297 87 674 283 54 17 chr5 167528264 167528504 -32101646 - MIR SINE MIR -6 256 8 299 65 22 0 chr5 167529634 167529680 -32100470 + (TG)n Simple_repeat Simple_repeat 1 47 0 901 283 60 52 chr5 167529854 167530257 -32099893 + MLT1K LTR MaLR 151 556 -32 206 328 129 35 chr5 167530444 167530560 -32099590 + L2 LINE L2 3115 3241 -31 264 291 13 0 chr5 167530807 167530886 -32099264 - MLT1K LTR MaLR -358 230 151 201 274 0 0 chr5 167530940 167530991 -32099159 - MIR3 SINE MIR -7 201 151 229 256 67 56 chr5 167531154 167531244 -32098906 + MER5A DNA MER1_type 56 146 -43 183 344 89 0 chr5 167531800 167531890 -32098260 - MER5A DNA MER1_type -68 121 24 326 287 9 0 chr5 167532020 167532128 -32098022 + L1MC4 LINE L1 7140 7248 -794 722 238 128 74 chr5 167532255 167532848 -32097302 + L1MC5 LINE L1 7302 7926 -35 241 281 183 12 chr5 167533165 167533329 -32096821 - MIR SINE MIR -6 256 65 308 254 119 18 chr5 167533665 167533796 -32096354 + MIR SINE MIR 30 150 -58 184 304 89 0 chr5 167533949 167534005 -32096145 + L2 LINE L2 3249 3309 -4 207 257 184 28 chr5 167534067 167534176 -32095974 + L2 LINE L2 3184 3309 -4 343 256 176 8 chr5 167534887 167535012 -32095138 + MIR3 SINE MIR 14 159 -49 460 261 0 55 chr5 167535428 167535589 -32094561 - MIR SINE MIR -46 162 15 2007 191 28 3 chr5 167535653 167536009 -32094141 - MLT1A1 LTR MaLR 0 365 1 565 254 127 24 chr5 167536322 167536535 -32093615 - MIR SINE MIR -14 248 14 264 254 91 27 chr5 167537048 167537158 -32092992 - MIR3 SINE MIR -50 158 42 286 325 166 10 chr5 167537918 167538138 -32092012 + MIR SINE MIR 1 254 -8 1890 215 52 9 chr5 167538907 167539373 -32090777 - MER113 DNA MER1_type? -35 486 1 592 299 53 37 chr5 167539626 167539870 -32090280 - L2 LINE L2 0 3272 3025 536 321 26 5 chr5 167539921 167540111 -32090039 + MIR SINE MIR 57 250 -12 2682 68 6 0 chr5 167540539 167540865 -32089285 + L1PA6 LINE L1 5827 6154 0 557 302 13 0 chr5 167541055 167541204 -32088946 - MIR SINE MIR -78 184 34 1650 203 59 0 chr5 167541222 167541543 -32088607 - MER58B DNA MER1_type -1 340 1 1072 268 59 59 chr5 167541634 167542146 -32088004 + MER113 DNA MER1_type? 4 515 -6 2321 108 0 0 chr5 167542524 167542821 -32087329 + AluSx SINE Alu 1 297 -15 2496 65 7 0 chr5 167542821 167543130 -32087020 + AluY SINE Alu 1 311 0 2407 130 5 23 chr5 167544679 167545063 -32085087 - L1PA8 LINE L1 -2 6170 5794 254 338 0 0 chr5 167545064 167545144 -32085006 + L2 LINE L2 3193 3272 0 620 283 17 51 chr5 167545164 167545401 -32084749 + MIR SINE MIR 22 250 -12 269 262 0 0 chr5 167545422 167545483 -32084667 - L2 LINE L2 -26 3287 3227 442 316 102 5 chr5 167545558 167545754 -32084396 - MIR SINE MIR -41 221 7 264 307 51 29 chr5 167546405 167546542 -32083608 + MIR SINE MIR 50 189 -73 21 57 0 0 chr5 167546613 167546648 -32083502 + AT_rich Low_complexity Low_complexity 1 35 0 322 263 162 0 chr5 167546726 167546825 -32083325 + MIR SINE MIR 53 167 -95 730 267 160 0 chr5 167547612 167547837 -32082313 - MIR SINE MIR 0 262 2 699 286 102 34 chr5 167547941 167548266 -32081884 - L3 LINE CR1 -17 1560 1214 1391 96 0 0 chr5 167548436 167548634 -32081516 - L1P LINE L1 -4777 1369 1172 3218 14 0 0 chr5 167548634 167548979 -32081171 + L1PA2 LINE L1 5805 6149 -6 194 0 39 0 chr5 167548983 167549009 -32081141 + (TAAAAA)n Simple_repeat Simple_repeat 3 29 0 752 164 0 55 chr5 167549133 167549261 -32080889 - FLAM_C SINE Alu -12 121 1 219 323 0 42 chr5 167549374 167549470 -32080680 + MIR SINE MIR 99 190 -72 782 320 83 63 chr5 167550127 167550696 -32079454 - MLT1K LTR MaLR 0 588 9 413 310 65 19 chr5 167550906 167551118 -32079032 + MIR SINE MIR 30 253 -9 489 356 130 7 chr5 167551131 167551415 -32078735 - L2 LINE L2 -19 3294 2976 469 165 12 24 chr5 167552231 167552316 -32077834 + MLT1F1 LTR MaLR 42 125 -442 2317 160 121 25 chr5 167552321 167552802 -32077348 + L1MD3 LINE L1 7409 7935 -60 535 266 84 69 chr5 167553217 167553988 -32076162 + L1MEc LINE L1 786 1568 -4828 450 264 7 7 chr5 167553982 167554130 -32076020 + L1MEc LINE L1 2931 3078 -3137 * 671 310 82 4 chr5 167554221 167554772 -32075378 + L1MEc LINE L1 3202 3795 -2420 331 215 123 54 chr5 167554777 167554907 -32075243 + L1ME3 LINE L1 5914 6052 -110 198 238 0 0 chr5 167555061 167555103 -32075047 + L2 LINE L2 3263 3304 -9 215 258 0 65 chr5 167555131 167555193 -32074957 + L2 LINE L2 3214 3271 -1 1951 136 30 0 chr5 167555314 167555615 -32074535 + AluSq SINE Alu 3 312 -1 190 354 125 10 chr5 167555894 167555990 -32074160 + MIR3 SINE MIR 15 121 -87 180 0 0 0 chr5 167556133 167556153 -32073997 + (A)n Simple_repeat Simple_repeat 1 20 0 253 325 18 18 chr5 167556534 167556648 -32073502 - L2 LINE L2 0 3313 3200 251 273 132 33 chr5 167556722 167556843 -32073307 + MIR3 SINE MIR 38 170 -38 252 217 33 0 chr5 167556844 167556904 -32073246 + L2 LINE L2 2598 2659 -655 1621 249 68 29 chr5 167556936 167557425 -32072725 + L2 LINE L2 2805 3312 -1 207 344 0 0 chr5 167558352 167558442 -32071708 + (CATATA)n Simple_repeat Simple_repeat 6 95 0 257 235 88 29 chr5 167558559 167558661 -32071489 + MIR SINE MIR 152 259 -3 26 50 0 0 chr5 167558667 167558707 -32071443 + AT_rich Low_complexity Low_complexity 1 40 0 211 263 129 74 chr5 167559186 167559322 -32070828 + MIR3 SINE MIR 9 149 -67 192 77 0 0 chr5 167560494 167560520 -32069630 + (A)n Simple_repeat Simple_repeat 1 26 0 241 270 0 0 chr5 167561029 167561092 -32069058 + C-rich Low_complexity Low_complexity 1 63 0 469 83 0 0 chr5 167663529 167663589 -31966561 - THE1A LTR MaLR -295 60 1 1097 224 18 5 chr5 167664403 167664622 -31965528 - MER58A DNA MER1_type 0 224 3 188 283 100 0 chr5 167665645 167665705 -31964445 + L2 LINE L2 3198 3263 -9 723 184 24 65 chr5 167665725 167665929 -31964221 - MLT1E2 LTR MaLR -300 205 5 1738 178 10 10 chr5 167665981 167666285 -31963865 + AluSx SINE Alu 1 304 -8 415 273 214 41 chr5 167666326 167666546 -31963604 + MIR SINE MIR 5 262 0 207 167 0 0 chr5 167666547 167666589 -31963561 + (TA)n Simple_repeat Simple_repeat 1 42 0 12034 134 42 12 chr5 167666589 167668576 -31961574 + Tigger1 DNA MER2_type 1 2048 -370 201 182 0 0 chr5 167668909 167668942 -31961208 + (TTA)n Simple_repeat Simple_repeat 2 34 0 281 329 53 35 chr5 167669009 167669179 -31960971 + MIR SINE MIR 73 245 -17 1637 189 97 42 chr5 167669893 167670368 -31959782 + MLT2B3 LTR ERVL 1 413 -40 220 299 0 0 chr5 167670368 167670435 -31959715 + (TA)n Simple_repeat Simple_repeat 1 67 0 273 163 0 0 chr5 167670435 167670484 -31959666 + (TG)n Simple_repeat Simple_repeat 2 50 0 314 94 75 0 chr5 167670486 167670539 -31959611 + MLT2B3 LTR ERVL 397 453 0 560 236 60 60 chr5 167670660 167670842 -31959308 - MIR SINE MIR -4 258 77 1449 281 111 26 chr5 167671168 167672087 -31958063 - HAL1 LINE L1 -1 2506 1510 236 196 110 61 chr5 167672234 167672397 -31957753 - HAL1 LINE L1 -1240 1267 1097 636 240 97 10 chr5 167672426 167672622 -31957528 + MIR SINE MIR 29 241 -21 38 61 0 0 chr5 167672678 167672744 -31957406 + AT_rich Low_complexity Low_complexity 1 66 0 235 333 45 38 chr5 167672966 167673098 -31957052 + L3 LINE CR1 1120 1252 -325 229 202 202 0 chr5 167673532 167673636 -31956514 + LTR48 LTR ERV1 654 778 -9 781 244 156 35 chr5 167673722 167674144 -31956006 + MLT1K LTR MaLR 1 473 -3 644 322 29 10 chr5 167674538 167674746 -31955404 + MIR SINE MIR 19 230 -32 2252 103 0 7 chr5 167675140 167675440 -31954710 + AluSc SINE Alu 1 298 -11 279 0 0 0 chr5 167675456 167675487 -31954663 + (TG)n Simple_repeat Simple_repeat 2 32 0 276 100 0 0 chr5 167675498 167675538 -31954612 + (TA)n Simple_repeat Simple_repeat 1 40 0 27 0 0 0 chr5 167675632 167675659 -31954491 + AT_rich Low_complexity Low_complexity 1 27 0 773 174 13 7 chr5 167675751 167675906 -31954244 + L1MB8 LINE L1 6022 6177 -1 477 330 122 14 chr5 167676006 167676227 -31953923 - MIR SINE MIR -6 256 12 232 345 24 0 chr5 167676694 167676778 -31953372 - MIR3 SINE MIR -14 194 109 396 372 28 0 chr5 167677762 167677907 -31952243 + MER5B DNA MER1_type 1 149 -29 190 320 20 40 chr5 167678702 167678802 -31951348 - L2 LINE L2 -94 3219 3122 367 353 27 21 chr5 167678940 167679127 -31951023 - L2 LINE L2 -419 2895 2708 716 319 118 28 chr5 167679167 167679624 -31950526 - L2 LINE L2 -2 3311 2814 526 266 9 0 chr5 167679806 167679919 -31950231 - MER81 DNA DNA 0 114 1 2039 227 59 27 chr5 167680119 167680644 -31949506 - MLT1F LTR MaLR 0 542 1 455 285 166 13 chr5 167681152 167681387 -31948763 - L2 LINE L2 -369 2945 2675 678 278 130 25 chr5 167681410 167681734 -31948416 + L2 LINE L2 2956 3313 0 336 358 14 0 chr5 167682108 167682256 -31947894 + MIR SINE MIR 107 256 -6 188 339 61 35 chr5 167683179 167683294 -31946856 - L2 LINE L2 -23 3290 3173 576 319 69 17 chr5 167683356 167683588 -31946562 + MIR SINE MIR 2 245 -17 274 311 126 94 chr5 167683590 167683940 -31946210 - L2 LINE L2 0 3313 2953 536 268 33 13 chr5 167684178 167684331 -31945819 + MER58B DNA MER1_type 186 341 0 187 119 24 71 chr5 167684626 167684668 -31945482 - MIR SINE MIR -139 69 30 207 287 35 70 chr5 167685656 167685770 -31944380 + MIR SINE MIR 12 120 -103 531 180 8 0 chr5 167685807 167685935 -31944215 + L1MA7 LINE L1 6159 6287 -4 606 359 40 55 chr5 167686162 167686510 -31943640 - L2 LINE L2 0 3272 2930 187 313 170 0 chr5 167686521 167686633 -31943517 - L2 LINE L2 0 3313 3183 181 286 14 14 chr5 167686639 167686709 -31943441 + MIR SINE MIR 191 260 -2 32 0 0 0 chr5 167687117 167687149 -31943001 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 167687377 167687400 -31942750 + AT_rich Low_complexity Low_complexity 1 23 0 1901 150 3 0 chr5 167688450 167688737 -31941413 - AluY SINE Alu -23 288 1 1222 200 78 103 chr5 167688895 167689370 -31940780 + MER4C LTR ERV1 1 463 -2 2664 13 0 22 chr5 167689456 167689767 -31940383 - AluY SINE Alu -7 304 1 705 214 71 50 chr5 167690300 167690482 -31939668 + MER5A DNA MER1_type 4 189 0 282 254 184 9 chr5 167690663 167690777 -31939373 - MIR SINE MIR -75 187 54 569 299 55 28 chr5 167691338 167691592 -31938558 - MIR SINE MIR 0 262 2 1243 113 64 198 chr5 167691923 167692296 -31937854 - Tigger7 DNA MER2_type -3 2484 2162 4213 183 23 18 chr5 167692347 167693139 -31937011 - Tigger7 DNA MER2_type -1691 796 1 182 62 31 0 chr5 167693839 167693871 -31936279 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 355 270 34 40 chr5 167693944 167694092 -31936058 + L1MC/D LINE L1 5378 5524 -2284 403 338 58 33 chr5 167694174 167694414 -31935736 + L1MC/D LINE L1 5542 5787 -2021 637 203 163 0 chr5 167694417 167694570 -31935580 - MER58A DNA MER1_type 0 224 47 2916 223 33 2 chr5 167695128 167695761 -31934389 - MER82 DNA MER2_type 0 653 1 26 0 0 0 chr5 167696148 167696174 -31933976 + AT_rich Low_complexity Low_complexity 1 26 0 229 299 10 10 chr5 167696501 167696598 -31933552 + L1MC/D LINE L1 5814 5910 -1898 846 261 110 52 chr5 167696599 167696944 -31933206 + MLT1A1 LTR MaLR 1 365 0 3666 237 44 44 chr5 167696944 167697920 -31932230 + MLT1A1-int LTR MaLR 1 976 -759 2058 206 93 62 chr5 167697928 167698360 -31931790 + MLT1A1-int LTR MaLR 1191 1643 -92 378 0 0 0 chr5 167698360 167698402 -31931748 + (TA)n Simple_repeat Simple_repeat 2 43 0 2058 206 93 62 chr5 167698402 167698498 -31931652 + MLT1A1-int LTR MaLR 1643 1735 0 604 224 139 100 chr5 167698498 167698828 -31931322 + MLT1A1 LTR MaLR 1 343 -22 274 287 37 65 chr5 167698889 167698997 -31931153 + L2 LINE L2 3163 3267 -5 313 353 0 25 chr5 167700601 167700654 -31929496 - MIR SINE MIR -58 150 97 2132 138 44 8 chr5 167700654 167701016 -31929134 - THE1C LTR MaLR 0 375 1 313 353 0 25 chr5 167701016 167701081 -31929069 - MIR SINE MIR -111 97 35 227 224 90 15 chr5 167702369 167702436 -31927714 + L2 LINE L2 3241 3312 -1 191 364 25 25 chr5 167702445 167702563 -31927587 - L3 LINE CR1 -85 1492 1375 10393 28 15 0 chr5 167702563 167704557 -31925593 + L1PA4 LINE L1 4144 6152 -3 289 247 11 0 chr5 167704829 167704918 -31925232 + L1ME LINE L1 5650 5739 -425 2109 259 67 83 chr5 167704919 167705943 -31924207 + L1M3d LINE L1 3 1010 -4881 180 0 0 0 chr5 167705944 167705964 -31924186 + (TA)n Simple_repeat Simple_repeat 1 20 0 286 268 0 0 chr5 167706108 167706205 -31923945 + (TA)n Simple_repeat Simple_repeat 1 97 0 1948 273 67 57 chr5 167706213 167707051 -31923099 + L1M3 LINE L1 1055 1975 -4407 941 229 5 0 chr5 167707167 167707372 -31922778 - MER2 DNA MER2_type -136 209 4 9825 226 61 29 chr5 167707413 167709679 -31920471 + L1M3 LINE L1 2043 4506 -2042 2799 19 0 0 chr5 167709679 167709990 -31920160 + AluYb8 SINE Alu 1 311 -7 9825 226 61 29 chr5 167709990 167711327 -31918823 + L1M3 LINE L1 4506 5798 -750 5669 253 99 32 chr5 167711662 167713506 -31916644 + L1M2a LINE L1 1621 3340 -3827 1684 154 66 0 chr5 167713506 167713779 -31916371 + AluJb SINE Alu 1 291 -21 5669 253 99 32 chr5 167713779 167715554 -31914596 + L1M2a LINE L1 3340 5219 -1948 1339 144 62 0 chr5 167715554 167715811 -31914339 + L1MA3 LINE L1 6032 6304 -1 5669 253 99 32 chr5 167715811 167715972 -31914178 + L1M2a LINE L1 5219 5368 -1799 5208 34 3 0 chr5 167715975 167716619 -31913531 - L1PA3 LINE L1 -786 5360 4715 4616 21 0 0 chr5 167716618 167717151 -31912999 + L1PA3 LINE L1 5361 5893 -262 * 3652 204 28 5 chr5 167717160 167717960 -31912190 + L1M2a LINE L1 5379 6196 -971 270 175 0 0 chr5 167717970 167718027 -31912123 + L1MA10 LINE L1 6271 6327 -7 * 7072 39 13 0 chr5 167718024 167718894 -31911256 - L1PA4 LINE L1 -3 6152 5272 2214 224 61 47 chr5 167719052 167719859 -31910291 + L1M4 LINE L1 3175 3992 -2154 2235 233 37 49 chr5 167719986 167720743 -31909407 + L1M4 LINE L1 3362 4109 -2037 1963 161 64 0 chr5 167720744 167721105 -31909045 + L1MC1 LINE L1 5931 6314 -19 198 263 23 135 chr5 167721249 167721382 -31908768 + L2 LINE L2 2717 2834 -480 1857 194 91 42 chr5 167721682 167722156 -31907994 - MLT1D LTR MaLR -3 502 6 231 318 45 18 chr5 167722625 167722735 -31907415 + MIR SINE MIR 32 144 -64 465 299 85 6 chr5 167723607 167723771 -31906379 - MIR SINE MIR -27 235 59 1639 201 53 25 chr5 167723773 167724132 -31906018 + MLT1A2 LTR MaLR 1 369 -5 746 117 0 0 chr5 167724931 167725042 -31905108 + AluSg/x SINE Alu 197 307 -5 4483 47 11 0 chr5 167725042 167725591 -31904559 - LTR10C LTR ERV1 -36 555 1 281 291 89 35 chr5 167726129 167726347 -31903803 + MLT1I LTR MaLR 93 282 -127 793 261 50 0 chr5 167726357 167726518 -31903632 - MER45A DNA AcHobo 0 178 10 364 311 28 0 chr5 167726516 167726622 -31903528 + MLT1I LTR MaLR 284 392 -17 * 387 300 42 71 chr5 167726680 167726920 -31903230 - Charlie8 DNA MER1_type -2152 265 33 1742 145 3 32 chr5 167727198 167727480 -31902670 + AluSx SINE Alu 3 276 -36 213 94 0 0 chr5 167727581 167727613 -31902537 + (CA)n Simple_repeat Simple_repeat 2 33 0 318 267 83 25 chr5 167727691 167727811 -31902339 + MIR SINE MIR 110 236 -26 227 267 128 23 chr5 167727836 167727922 -31902228 + L2 LINE L2 3212 3306 -7 735 252 18 90 chr5 167728083 167728361 -31901789 + MLT1L LTR MaLR 32 289 -326 6386 30 0 6 chr5 167728390 167729115 -31901035 + SVA Other Other 665 1385 -1 249 33 0 0 chr5 167729120 167729150 -31901000 + (A)n Simple_repeat Simple_repeat 1 30 0 324 275 58 14 chr5 167729290 167729428 -31900722 + MLT1L LTR MaLR 470 613 -2 313 202 184 44 chr5 167729834 167729948 -31900202 + L3 LINE CR1 1386 1515 -62 298 374 65 26 chr5 167730293 167730523 -31899627 + MIR SINE MIR 4 242 -20 209 211 0 0 chr5 167730755 167730793 -31899357 + GA-rich Low_complexity Low_complexity 1 38 0 195 307 139 15 chr5 167730806 167730943 -31899207 - MIR SINE MIR -18 244 91 187 238 0 0 chr5 167731032 167731074 -31899076 + L3 LINE CR1 1535 1576 -1 * 227 118 0 0 chr5 167731041 167731075 -31899075 + MIR3 SINE MIR 171 204 -4 397 229 224 29 chr5 167731546 167731716 -31898434 + MIR SINE MIR 8 210 -52 4934 101 1 3 chr5 167731750 167732441 -31897709 + L1PA8A LINE L1 5436 6125 -6 22 35 0 0 chr5 167732929 167732958 -31897192 + AT_rich Low_complexity Low_complexity 1 29 0 10448 77 13 2 chr5 167733232 167735447 -31894703 - L1PA7 LINE L1 -2 6152 3917 879 346 33 22 chr5 167735675 167736167 -31893983 - L2 LINE L2 -314 2999 2504 320 299 55 53 chr5 167736167 167736383 -31893767 + MIR SINE MIR 1 218 -44 543 335 85 20 chr5 167736416 167736709 -31893441 - L2 LINE L2 -876 2438 2127 421 240 70 85 chr5 167737227 167737427 -31892723 + MIR SINE MIR 22 218 -44 231 271 17 0 chr5 167738020 167738079 -31892071 + CT-rich Low_complexity Low_complexity 1 60 0 2558 174 64 96 chr5 167738159 167739131 -31891019 - Charlie1a DNA MER1_type -1 1454 514 2496 112 0 3 chr5 167739131 167739489 -31890661 + THE1B LTR MaLR 1 357 -7 1572 213 46 23 chr5 167739495 167739931 -31890219 - Charlie1a DNA MER1_type -937 518 73 436 298 122 5 chr5 167740262 167740450 -31889700 - MIR SINE MIR -25 237 28 191 290 11 75 chr5 167740528 167740621 -31889529 - L3 LINE CR1 -57 1520 1434 357 294 62 14 chr5 167740922 167741068 -31889082 + L2 LINE L2 2932 3084 -188 4513 164 46 16 chr5 167741127 167741997 -31888153 + MER4D LTR ERV1 1 896 -7 205 380 51 0 chr5 167742011 167742090 -31888060 + L2 LINE L2 3137 3219 -53 186 366 81 8 chr5 167742514 167742637 -31887513 + L2 LINE L2 3137 3268 -4 310 250 82 26 chr5 167742848 167743030 -31887120 - MIR SINE MIR -12 250 21 233 208 233 17 chr5 167743520 167743640 -31886510 + L1ME4a LINE L1 5974 6119 -2 246 299 35 51 chr5 167743673 167743860 -31886290 + MIR SINE MIR 29 212 -50 1605 150 19 61 chr5 167744423 167744736 -31885414 + AluJo SINE Alu 1 300 -12 666 168 28 5 chr5 167744923 167745137 -31885013 - L1MA5 LINE L1 -7 6293 5955 2801 179 63 48 chr5 167745558 167746251 -31883899 - L1MB3 LINE L1 -1 6182 5479 224 353 79 11 chr5 167746642 167746832 -31883318 + L2 LINE L2 2772 2974 -340 187 267 44 0 chr5 167747752 167747797 -31882353 - L3 LINE CR1 -12 1565 1519 1594 182 3 25 chr5 167748045 167748331 -31881819 + AluJo SINE Alu 14 293 -19 1080 254 10 23 chr5 167748533 167748836 -31881314 + AluJo SINE Alu 14 312 0 331 295 145 10 chr5 167749170 167749377 -31880773 - MIR SINE MIR -27 235 1 400 189 67 0 chr5 167750564 167750654 -31879496 - MIR SINE MIR -82 180 85 189 211 26 0 chr5 167751004 167751042 -31879108 + L2 LINE L2 3214 3252 -20 4122 183 30 14 chr5 167751773 167752544 -31877606 + LTR39 LTR ERV1 1 783 0 207 278 124 52 chr5 167753082 167753179 -31876971 + MIR3 SINE MIR 84 187 -21 227 265 106 23 chr5 167753207 167753339 -31876811 - MIR SINE MIR -7 255 113 200 71 0 0 chr5 167753415 167753443 -31876707 + MIR SINE MIR 124 151 -111 311 359 57 0 chr5 167753725 167753831 -31876319 + MIR SINE MIR 2 113 -149 270 281 94 47 chr5 167753956 167754084 -31876066 + MIR SINE MIR 96 229 -33 197 313 0 15 chr5 167754128 167754195 -31875955 + MIR SINE MIR 88 153 -55 1905 171 0 0 chr5 167754210 167754496 -31875654 - AluSx SINE Alu -24 288 3 1072 221 95 0 chr5 167754503 167754765 -31875385 - LTR53 LTR ERVL -11 508 222 473 213 315 14 chr5 167755692 167755908 -31874242 + MLT1C LTR MaLR 187 467 0 261 294 40 56 chr5 167755985 167756111 -31874039 + L2 LINE L2 2945 3068 -204 3848 149 29 33 chr5 167757141 167757871 -31872279 - LTR8A LTR ERV1 0 727 1 379 242 225 0 chr5 167758239 167758359 -31871791 - MER5A DNA MER1_type -1 188 42 344 300 0 0 chr5 167758498 167758598 -31871552 + HsTC2 DNA Tc2 6 105 -1793 1443 231 142 2 chr5 167758657 167759194 -31870956 + HsTC2 DNA Tc2 1282 1893 -5 218 304 38 13 chr5 167759328 167759407 -31870743 - MIR SINE MIR -110 152 72 562 269 122 25 chr5 167760214 167760411 -31869739 - MIR SINE MIR -13 249 34 189 333 144 20 chr5 167761216 167761369 -31868781 - L3 LINE CR1 -390 1187 1016 460 245 180 14 chr5 167761559 167761698 -31868452 - MER5A DNA MER1_type -2 187 26 418 264 27 9 chr5 167761734 167761844 -31868306 + MER5B DNA MER1_type 14 125 -53 228 323 11 21 chr5 167761861 167761954 -31868196 + MIR SINE MIR 168 259 -3 651 163 78 30 chr5 167762128 167762294 -31867856 - L1MC/D LINE L1 -518 5724 5551 22 0 0 0 chr5 167762296 167762318 -31867832 + AT_rich Low_complexity Low_complexity 1 22 0 40860 33 21 1 chr5 167762318 167768345 -31861805 - L1HS LINE L1 0 6155 7 522 194 9 0 chr5 167768348 167768456 -31861694 - L1MC/D LINE L1 -797 5562 5454 188 384 112 33 chr5 167769693 167769935 -31860215 + L2 LINE L2 2977 3237 -35 3799 101 21 2 chr5 167770805 167771367 -31858783 + MER41B LTR ERV1 1 573 -62 2372 81 0 24 chr5 167771368 167771703 -31858447 - L1PA6 LINE L1 -2 6152 5826 799 11 0 0 chr5 167771705 167771800 -31858350 + L1P2 LINE L1 5693 5787 -367 519 91 0 16 chr5 167771800 167771895 -31858255 + MER41B LTR ERV1 467 635 0 241 299 84 9 chr5 167772221 167772328 -31857822 - MIR SINE MIR -67 141 27 311 292 26 9 chr5 167773335 167773448 -31856702 + GA-rich Low_complexity Low_complexity 1 115 0 252 0 0 0 chr5 167774191 167774219 -31855931 + (T)n Simple_repeat Simple_repeat 1 28 0 515 306 32 0 chr5 167774545 167774764 -31855386 - L1ME LINE L1 -372 5790 5565 669 270 56 19 chr5 167774924 167775139 -31855011 + MIR SINE MIR 29 251 -11 392 289 51 32 chr5 167776374 167776530 -31853620 + MIR SINE MIR 104 262 0 387 226 104 0 chr5 167776560 167776675 -31853475 - MIR3 SINE MIR -1 207 81 227 236 42 0 chr5 167777038 167777110 -31853040 + GA-rich Low_complexity Low_complexity 2 76 0 940 152 0 6 chr5 167777612 167777783 -31852367 - L1MA4 LINE L1 -9 6291 6122 23 0 0 0 chr5 167778228 167778251 -31851899 + AT_rich Low_complexity Low_complexity 1 23 0 198 0 0 0 chr5 167778481 167778503 -31851647 + (T)n Simple_repeat Simple_repeat 1 22 0 1195 198 82 72 chr5 167778746 167779151 -31850999 - MLT1C LTR MaLR 0 467 59 234 257 67 0 chr5 167779521 167779626 -31850524 + MLT1K LTR MaLR 454 565 -23 385 317 75 0 chr5 167779658 167779778 -31850372 - L2 LINE L2 -1 3271 3143 526 340 145 29 chr5 167780382 167780873 -31849277 + LTR67 LTR ERVL 4 551 -6 207 0 0 0 chr5 167781709 167781732 -31848418 + (A)n Simple_repeat Simple_repeat 1 23 0 22 56 0 0 chr5 167782737 167782773 -31847377 + AT_rich Low_complexity Low_complexity 1 36 0 239 266 158 7 chr5 167782952 167783091 -31847059 + MIR SINE MIR 103 262 0 420 306 142 42 chr5 167783275 167783733 -31846417 - L2 LINE L2 -6 3307 2804 186 303 76 17 chr5 167784721 167784840 -31845310 + L2 LINE L2 3120 3245 -68 231 265 0 0 chr5 167785210 167785259 -31844891 + GA-rich Low_complexity Low_complexity 5 53 0 348 300 100 0 chr5 167785655 167785785 -31844365 - MIR SINE MIR -118 144 2 252 0 0 0 chr5 167785794 167785822 -31844328 + (A)n Simple_repeat Simple_repeat 1 28 0 335 328 59 43 chr5 167785951 167786207 -31843943 + L2 LINE L2 2718 2977 -337 2212 70 0 3 chr5 167786257 167786580 -31843570 + AluY SINE Alu 1 322 0 418 250 24 32 chr5 167786687 167786811 -31843339 + L2 LINE L2 3159 3281 -32 359 272 11 0 chr5 167787730 167787822 -31842328 - L2 LINE L2 -27 3245 3153 314 299 171 21 chr5 167788105 167788292 -31841858 - MIR SINE MIR -47 215 1 197 302 49 49 chr5 167788356 167788465 -31841685 - MIR SINE MIR -75 133 43 1037 193 51 30 chr5 167789276 167789571 -31840579 + MER33 DNA MER1_type 23 323 -1 188 418 10 0 chr5 167789581 167789679 -31840471 - L3 LINE CR1 -88 1489 1391 195 415 37 0 chr5 167789800 167789935 -31840215 - L3 LINE CR1 -342 1235 1096 1539 179 67 63 chr5 167790032 167790462 -31839688 + MSTB1 LTR MaLR 1 432 0 438 224 105 92 chr5 167790785 167790939 -31839211 + MLT1K LTR MaLR 355 514 -74 225 108 0 0 chr5 167790939 167790976 -31839174 + (CA)n Simple_repeat Simple_repeat 2 38 0 438 224 105 92 chr5 167790976 167791049 -31839101 + MLT1K LTR MaLR 514 585 -3 455 273 38 38 chr5 167791942 167792125 -31838025 - MIR SINE MIR -75 187 5 631 190 66 0 chr5 167792228 167792365 -31837785 + L1M4 LINE L1 5523 5668 -516 814 296 38 22 chr5 167792370 167792684 -31837466 - MLT2F LTR ERVL -325 338 20 964 221 33 9 chr5 167792842 167793055 -31837095 - MER20 DNA MER1_type 0 219 2 271 213 0 0 chr5 167793145 167793192 -31836958 + AluJ/monomer SINE Alu 236 282 -20 231 167 0 0 chr5 167793160 167793196 -31836954 + Alu SINE Alu 85 120 -182 * 1755 166 7 20 chr5 167793592 167793888 -31836262 + AluJo SINE Alu 1 292 -20 3332 154 6 6 chr5 167794043 167794570 -31835580 + MER1A DNA MER1_type 1 527 0 219 192 39 0 chr5 167794896 167794974 -31835176 + (TATATG)n Simple_repeat Simple_repeat 3 83 0 4156 186 62 55 chr5 167795201 167795659 -31834491 + L1MA7 LINE L1 4170 4623 -1668 354 23 0 0 chr5 167795659 167795702 -31834448 + (CA)n Simple_repeat Simple_repeat 1 43 0 4156 186 62 55 chr5 167795702 167797230 -31832920 + L1MA7 LINE L1 4623 6181 -110 377 313 15 10 chr5 167797241 167797372 -31832778 - MIR SINE MIR -77 131 20 2172 54 0 14 chr5 167797941 167798217 -31831933 - AluY SINE Alu -18 293 22 222 281 76 103 chr5 167798500 167798685 -31831465 + L2 LINE L2 2503 2682 -632 293 309 57 23 chr5 167798895 167799070 -31831080 + MLT1J LTR MaLR 223 403 -108 207 176 0 0 chr5 167799080 167799114 -31831036 + CT-rich Low_complexity Low_complexity 1 34 0 1190 133 0 6 chr5 167799216 167799381 -31830769 - AluSp SINE Alu -149 164 1 311 325 0 0 chr5 167800223 167800300 -31829850 + MIR SINE MIR 20 96 -166 2102 115 14 3 chr5 167800503 167800789 -31829361 - AluSq SINE Alu -24 289 1 221 291 87 47 chr5 167800964 167801078 -31829072 - L2 LINE L2 -22 3291 3170 2488 73 0 0 chr5 167801078 167801379 -31828771 - AluY SINE Alu -10 301 1 221 291 87 47 chr5 167801379 167801391 -31828759 - L2 LINE L2 -143 3170 3160 2305 11 0 0 chr5 167801395 167801657 -31828493 - L1PA2 LINE L1 -1 6154 5893 21 0 0 0 chr5 167802065 167802086 -31828064 + AT_rich Low_complexity Low_complexity 1 21 0 246 309 117 43 chr5 167802417 167802579 -31827571 + MIR SINE MIR 1 174 -88 3256 162 11 8 chr5 167805270 167805795 -31824355 - MER1A DNA MER1_type 0 527 1 705 241 147 16 chr5 167805846 167806220 -31823930 - LTR37A LTR ERV1 0 426 4 387 232 101 48 chr5 167807539 167807746 -31822404 + LTR68 LTR ERV1 216 433 -307 716 183 0 51 chr5 167808062 167808237 -31821913 + MER20 DNA MER1_type 54 219 0 372 273 38 76 chr5 167808291 167808529 -31821621 + LTR16A1 LTR ERVL 1 229 -228 1043 281 49 34 chr5 167808635 167809165 -31820985 + Charlie7 DNA MER1_type 180 717 -1895 1620 214 64 25 chr5 167809171 167809652 -31820498 + MLT1D LTR MaLR 6 505 0 367 265 83 0 chr5 167809824 167809956 -31820194 + Charlie8 DNA MER1_type 42 184 -2233 232 329 36 64 chr5 167810338 167810478 -31819672 + MIR3 SINE MIR 19 154 -54 394 329 40 41 chr5 167810769 167811079 -31819071 + L2 LINE L2 2706 3014 -258 1202 173 107 28 chr5 167811446 167811764 -31818386 - MER2 DNA MER2_type -1 344 2 387 289 53 37 chr5 167812141 167812331 -31817819 + MIR SINE MIR 1 193 -69 2097 133 0 7 chr5 167813813 167814114 -31816036 + AluSx SINE Alu 1 299 -13 1792 175 3 19 chr5 167814355 167814664 -31815486 + AluSx SINE Alu 1 304 -8 244 271 0 0 chr5 167814836 167814895 -31815255 + G-rich Low_complexity Low_complexity 2 60 0 247 269 72 47 chr5 167814972 167815251 -31814899 + L1MDa LINE L1 1541 1826 -4714 825 265 126 75 chr5 167815507 167815679 -31814471 + L1MC4 LINE L1 7098 7260 -782 1483 204 87 23 chr5 167815679 167816072 -31814078 + LTR52 LTR ERVL 1 418 -3 825 265 126 75 chr5 167816072 167816798 -31813352 + L1MC4 LINE L1 7260 8042 0 625 248 174 46 chr5 167817020 167817452 -31812698 + L1MDa LINE L1 3172 3658 -2882 272 332 13 75 chr5 167819930 167820156 -31809994 + LTR67 LTR ERVL 15 226 -331 467 296 20 25 chr5 167820159 167820362 -31809788 + LTR67 LTR ERVL 348 549 -8 2739 160 15 93 chr5 167820433 167821097 -31809053 + LTR9 LTR ERV1 1 612 0 205 301 14 14 chr5 167821451 167821524 -31808626 + MER5A DNA MER1_type 8 80 -109 346 192 0 77 chr5 167821576 167821654 -31808496 - THE1C-int LTR MaLR -816 764 693 2730 105 93 95 chr5 167821655 167822235 -31807915 - THE1C-int LTR MaLR -1001 579 1 1874 115 61 61 chr5 167822235 167822610 -31807540 - THE1C LTR MaLR 0 375 1 1782 162 7 0 chr5 167823043 167823321 -31806829 + AluJo SINE Alu 1 280 -32 375 23 0 0 chr5 167823322 167823366 -31806784 + (CA)n Simple_repeat Simple_repeat 1 44 0 780 270 181 26 chr5 167823690 167824072 -31806078 - MLT1D LTR MaLR -1 504 64 1496 216 85 0 chr5 167824107 167824436 -31805714 + MLT1A1 LTR MaLR 5 361 -4 305 174 0 72 chr5 167824435 167824504 -31805646 - MLT1D LTR MaLR -440 65 2 * 189 107 0 0 chr5 167825609 167825637 -31804513 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 190 263 18 97 chr5 167826245 167826359 -31803791 + MIR3 SINE MIR 58 162 -46 393 303 19 65 chr5 167826366 167826521 -31803629 + MIR SINE MIR 5 152 -110 209 361 0 0 chr5 167826775 167826847 -31803303 + MER5B DNA MER1_type 9 80 -98 563 216 128 0 chr5 167828390 167828538 -31801612 - MER5A DNA MER1_type -7 182 16 500 284 107 12 chr5 167828692 167828861 -31801289 + MER5A DNA MER1_type 4 188 -1 222 118 0 0 chr5 167829239 167829273 -31800877 + (TA)n Simple_repeat Simple_repeat 1 34 0 183 42 0 0 chr5 167829280 167829304 -31800846 + (TG)n Simple_repeat Simple_repeat 2 25 0 850 228 10 5 chr5 167829307 167829509 -31800641 - MLT2D LTR ERVL -211 203 1 202 232 0 73 chr5 167829515 167829597 -31800553 + L2 LINE L2 3142 3217 -96 353 281 35 9 chr5 167829603 167829717 -31800433 + L2 LINE L2 3192 3308 -5 395 273 108 5 chr5 167830301 167830495 -31799655 + L1ME LINE L1 5559 5772 -349 431 308 23 0 chr5 167830949 167831079 -31799071 + MER94 DNA DNA 1 133 -1 1698 180 7 0 chr5 167831856 167832140 -31798010 - AluJb SINE Alu -26 286 1 11663 201 92 42 chr5 167833073 167835807 -31794343 + L1M2 LINE L1 3 2875 -3974 1959 242 32 18 chr5 167835806 167836360 -31793790 + L1M2 LINE L1 2832 3393 -3455 * 10708 43 2 1 chr5 167836499 167837820 -31792330 - L1P LINE L1 -1420 4726 3404 7430 146 66 15 chr5 167837818 167839751 -31790399 + L1P LINE L1 2347 4511 -1635 * 556 169 4 39 chr5 167839736 167839880 -31790270 + L1 LINE L1 5180 5318 -838 * 11254 153 20 3 chr5 167839908 167841768 -31788382 + L1PA15-16 LINE L1 891 2782 -4067 362 337 40 20 chr5 167843361 167843563 -31786587 + MIR SINE MIR 20 225 -37 492 264 61 7 chr5 167844159 167844307 -31785843 - MIR SINE MIR -15 247 92 436 312 83 32 chr5 167844578 167844831 -31785319 - MLT1I LTR MaLR -139 270 5 391 335 39 13 chr5 167845242 167845397 -31784753 + MIR3 SINE MIR 3 161 -47 476 314 145 6 chr5 167845397 167845556 -31784594 - MER5A DNA MER1_type 0 189 9 391 244 38 69 chr5 167845596 167845727 -31784423 - L2 LINE L2 -10 3262 3136 422 302 95 34 chr5 167846500 167846663 -31783487 + MIR3 SINE MIR 18 194 -14 1623 152 82 12 chr5 167846663 167846992 -31783158 + L1MA9 LINE L1 5961 6312 0 422 302 95 34 chr5 167846992 167847007 -31783143 + MIR3 SINE MIR 194 207 -1 838 304 103 50 chr5 167847244 167847938 -31782212 + L2 LINE L2 2584 3312 -1 222 327 39 32 chr5 167848540 167848696 -31781454 - MER5B DNA MER1_type -7 171 15 638 262 18 6 chr5 167849340 167849504 -31780646 + MIR SINE MIR 91 256 -6 24 0 0 0 chr5 167849528 167849552 -31780598 + AT_rich Low_complexity Low_complexity 1 24 0 333 235 49 0 chr5 167849552 167849633 -31780517 + MSTD LTR MaLR 1 85 -343 1236 77 0 0 chr5 167849633 167849789 -31780361 + AluSc SINE Alu 144 299 -10 1200 228 52 55 chr5 167849789 167850118 -31780032 + MSTD LTR MaLR 68 395 -1 275 294 7 63 chr5 167850191 167850334 -31779816 + L2 LINE L2 3171 3305 -8 657 291 122 6 chr5 167850674 167851028 -31779122 + L1ME4a LINE L1 5502 5896 -225 207 139 0 0 chr5 167851049 167851085 -31779065 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 343 342 127 6 chr5 167852662 167852820 -31777330 + MIR SINE MIR 11 187 -75 2054 110 3 10 chr5 167852843 167853134 -31777016 + AluSg SINE Alu 1 289 -21 927 307 117 30 chr5 167853375 167853581 -31776569 + LTR16C LTR ERVL 17 204 -287 1016 171 16 11 chr5 167853581 167853768 -31776382 - MER5A DNA MER1_type -1 188 1 927 307 117 30 chr5 167853768 167853810 -31776340 + LTR16C LTR ERVL 204 241 -250 1867 163 30 67 chr5 167853810 167854214 -31775936 - MLT1B LTR MaLR -1 389 1 927 307 117 30 chr5 167854214 167854401 -31775749 + LTR16C LTR ERVL 241 491 0 245 280 30 30 chr5 167854633 167854733 -31775417 - LTR67 LTR ERVL 0 557 458 342 0 0 0 chr5 167855500 167855538 -31774612 + (CA)n Simple_repeat Simple_repeat 2 39 0 1452 227 0 10 chr5 167855738 167856033 -31774117 - AluJo SINE Alu -20 292 1 272 272 37 12 chr5 167856329 167856410 -31773740 + MIR3 SINE MIR 78 160 -48 189 107 0 0 chr5 167857169 167857197 -31772953 + (TC)n Simple_repeat Simple_repeat 1 28 0 390 289 91 83 chr5 167857347 167857600 -31772550 + L1MEc LINE L1 35 289 -6107 186 43 0 0 chr5 167857619 167857642 -31772508 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 5252 83 8 4 chr5 167857643 167858363 -31771787 - L1PB1 LINE L1 -43 6108 5386 731 290 65 56 chr5 167858386 167858741 -31771409 + L1MEc LINE L1 278 635 -5761 2254 96 0 0 chr5 167858768 167859077 -31771073 - AluSc SINE Alu 0 309 1 7618 190 91 29 chr5 167859077 167859162 -31770988 - L1MA9 LINE L1 -60 6252 6174 183 100 0 0 chr5 167859162 167859192 -31770958 + (TG)n Simple_repeat Simple_repeat 2 31 0 7618 190 91 29 chr5 167859192 167860050 -31770100 - L1MA9 LINE L1 -138 6174 5371 198 0 0 0 chr5 167860050 167860072 -31770078 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 7618 190 91 29 chr5 167860072 167860872 -31769278 - L1MA9 LINE L1 -941 5371 4623 1712 181 3 14 chr5 167860872 167861217 -31768933 + AluSx SINE Alu 1 342 0 7618 190 91 29 chr5 167861217 167862324 -31767826 - L1MA9 LINE L1 -1689 4623 3222 2433 192 44 9 chr5 167862323 167862994 -31767156 + L1P3 LINE L1 4792 5475 -691 * 8321 42 5 1 chr5 167863283 167864359 -31765791 - L1PA4 LINE L1 -2718 3428 2349 16191 40 2 0 chr5 167864359 167867096 -31763054 + L1PA4 LINE L1 3404 6145 -10 245 319 26 17 chr5 167867109 167867225 -31762925 + LTR16A1 LTR ERVL 74 190 -267 295 248 59 20 chr5 167867311 167867412 -31762738 + LTR16A1 LTR ERVL 353 457 0 314 232 39 21 chr5 167867412 167867530 -31762620 + L1P3 LINE L1 5668 5786 -335 670 281 135 64 chr5 167868270 167868803 -31761347 + MLT1G1 LTR MaLR 8 578 -17 21 57 0 0 chr5 167869127 167869162 -31760988 + AT_rich Low_complexity Low_complexity 1 35 0 259 372 155 12 chr5 167869661 167869919 -31760231 + L3 LINE CR1 1192 1486 -91 324 299 7 69 chr5 167869942 167870086 -31760064 + L2 LINE L2 3138 3272 0 22 35 0 0 chr5 167870388 167870417 -31759733 + AT_rich Low_complexity Low_complexity 1 29 0 899 223 57 9 chr5 167870607 167870818 -31759332 - MER58A DNA MER1_type -3 221 1 284 363 15 15 chr5 167870871 167871035 -31759115 - MIR SINE MIR -59 203 40 2156 120 45 25 chr5 167871279 167871636 -31758514 - THE1B LTR MaLR 0 364 1 859 331 51 49 chr5 167871708 167872198 -31757952 - MLT1K LTR MaLR -71 517 27 450 257 22 15 chr5 167872771 167872907 -31757243 + MLT1J LTR MaLR 373 509 -2 2012 66 26 0 chr5 167874640 167874913 -31755237 + L1PA7 LINE L1 5874 6153 -1 976 243 47 0 chr5 167875326 167875561 -31754589 + MIR SINE MIR 11 256 -6 1903 204 85 65 chr5 167875579 167876122 -31754028 + MLT2B3 LTR ERVL 1 554 0 252 309 65 0 chr5 167876379 167876502 -31753648 - L1MC/D LINE L1 -1988 5820 5690 1936 154 27 62 chr5 167876535 167876937 -31753213 + MLT1B LTR MaLR 3 390 0 237 199 28 23 chr5 167876973 167877065 -31753085 - L1MC/D LINE L1 -541 5580 5492 1944 145 10 0 chr5 167877175 167877497 -31752653 - AluSx SINE Alu 0 325 1 406 390 11 11 chr5 167879048 167879230 -31750920 + MIR3 SINE MIR 20 201 -7 386 319 103 0 chr5 167879343 167879528 -31750622 + MIR SINE MIR 59 262 0 240 271 12 35 chr5 167880207 167880292 -31749858 + L3 LINE CR1 1114 1196 -381 280 294 11 11 chr5 167880304 167880396 -31749754 - MIR SINE MIR 0 262 171 270 247 82 0 chr5 167880525 167880598 -31749552 + L3 LINE CR1 1196 1274 -303 726 378 6 0 chr5 167881521 167881833 -31748317 + L3 LINE CR1 517 830 -747 870 284 32 77 chr5 167882000 167882482 -31747668 + L2 LINE L2 2550 3008 -264 2471 123 8 3 chr5 167882591 167882965 -31747185 + L1PA11 LINE L1 5799 6174 0 332 287 16 33 chr5 167882967 167883089 -31747061 + L2 LINE L2 3193 3312 -1 346 343 97 61 chr5 167884239 167884872 -31745278 - L2 LINE L2 -5 3267 2560 1052 196 25 0 chr5 167885071 167885270 -31744880 - MER20 DNA MER1_type -14 205 2 380 359 143 5 chr5 167885378 167885595 -31744555 + MIR SINE MIR 15 261 -1 2074 134 0 28 chr5 167885848 167886169 -31743981 + AluSx SINE Alu 1 312 0 199 216 0 0 chr5 167886811 167886848 -31743302 + L2 LINE L2 3268 3304 -9 235 299 47 3 chr5 167886851 167886933 -31743217 + MIR SINE MIR 63 148 -60 180 216 98 0 chr5 167887166 167887217 -31742933 + MIR3 SINE MIR 151 206 -2 * 274 228 38 25 chr5 167887215 167887294 -31742856 + L3b LINE CR1 1302 1381 -202 240 371 81 0 chr5 167887824 167887948 -31742202 + MLT1I LTR MaLR 9 142 -267 782 107 69 8 chr5 167888083 167888214 -31741936 + MER30 DNA MER1_type 2 140 -90 720 88 59 7 chr5 167888214 167888350 -31741800 - L1PA2 LINE L1 -4 6151 6009 1909 23 0 0 chr5 167888461 167888678 -31741472 - L1PA3 LINE L1 -28 6127 5911 537 88 0 0 chr5 167888678 167888746 -31741404 + MER30 DNA MER1_type 127 194 -36 1687 256 72 30 chr5 167888806 167889365 -31740785 + MLT1E LTR MaLR 4 589 -4 306 50 0 0 chr5 167890162 167890202 -31739948 + (TTTC)n Simple_repeat Simple_repeat 1 40 0 1234 220 32 0 chr5 167890202 167890452 -31739698 - AluSq SINE Alu -55 258 1 323 268 134 61 chr5 167890809 167891040 -31739110 + MLT1K LTR MaLR 322 569 -19 346 280 32 41 chr5 167891815 167892033 -31738117 + HAL1 LINE L1 2272 2487 -20 291 54 0 0 chr5 167892044 167892081 -31738069 + (CA)n Simple_repeat Simple_repeat 2 38 0 534 316 93 13 chr5 167892155 167892380 -31737770 - MIR SINE MIR -18 244 2 334 271 159 32 chr5 167893357 167893634 -31736516 + L2 LINE L2 2814 3125 -188 1665 222 41 22 chr5 167893866 167894325 -31735825 + MER110A LTR ERV1 1 468 0 389 304 89 0 chr5 167894350 167894462 -31735688 + MIR3 SINE MIR 70 191 -17 21 36 0 0 chr5 167895313 167895341 -31734809 + AT_rich Low_complexity Low_complexity 1 28 0 494 339 91 5 chr5 167896292 167896513 -31733637 + MIR SINE MIR 11 250 -12 206 258 113 0 chr5 167896565 167896627 -31733523 + MIR SINE MIR 24 92 -116 253 238 16 16 chr5 167896936 167896999 -31733151 - L2 LINE L2 0 3313 3251 249 325 32 8 chr5 167897224 167897347 -31732803 - L2 LINE L2 -340 2974 2849 315 140 35 18 chr5 167897388 167897445 -31732705 - L2 LINE L2 0 3313 3256 31 0 0 0 chr5 167897508 167897539 -31732611 + AT_rich Low_complexity Low_complexity 1 31 0 270 276 243 0 chr5 167897551 167897732 -31732418 - L2 LINE L2 -1087 2227 2003 25914 144 15 22 chr5 167897733 167900230 -31729920 + L1PA8 LINE L1 3 2517 -3970 2165 98 20 14 chr5 167900230 167900527 -31729623 + AluSx SINE Alu 3 301 -11 25914 144 15 22 chr5 167900527 167904495 -31725655 + L1PA8 LINE L1 2517 6487 0 413 291 16 8 chr5 167905272 167905399 -31724751 - Charlie8 DNA MER1_type -2152 265 138 195 226 226 11 chr5 167905546 167905639 -31724511 - L2 LINE L2 -1070 2244 2132 245 319 29 0 chr5 167905694 167905763 -31724387 - Charlie8 DNA MER1_type -2346 71 1 350 21 0 21 chr5 167905764 167905812 -31724338 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 330 326 40 76 chr5 167905967 167906191 -31723959 - MIR SINE MIR -32 230 15 567 301 92 34 chr5 167907322 167907561 -31722589 - MIR SINE MIR 0 262 10 486 170 30 20 chr5 167907632 167907732 -31722418 + MER5A DNA MER1_type 12 112 -77 26 30 0 0 chr5 167908546 167908579 -31721571 + AT_rich Low_complexity Low_complexity 1 33 0 2339 212 114 50 chr5 167908579 167909521 -31720629 - L1MC5 LINE L1 -42 7919 6918 249 205 0 0 chr5 167909510 167909549 -31720601 - L1MC4 LINE L1 -1055 6987 6949 * 202 71 24 24 chr5 167909549 167909591 -31720559 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 5476 126 22 22 chr5 167909632 167910657 -31719493 - L1PA15 LINE L1 0 6165 5128 3841 52 2 0 chr5 167910789 167911269 -31718881 - L1PA5 LINE L1 -1686 4460 3980 7399 48 0 0 chr5 167911269 167912947 -31717203 + L1PA5 LINE L1 4464 6141 -13 323 291 83 52 chr5 167912962 167913184 -31716966 - L1M4 LINE L1 -2751 3395 3181 1480 143 0 0 chr5 167913184 167913414 -31716736 - L1PA14 LINE L1 0 6161 5932 323 291 83 52 chr5 167913414 167914078 -31716072 - L1M4 LINE L1 -2965 3181 2481 23 0 0 0 chr5 167914178 167914201 -31715949 + AT_rich Low_complexity Low_complexity 1 23 0 291 93 0 0 chr5 167914561 167914604 -31715546 + (TG)n Simple_repeat Simple_repeat 2 44 0 618 248 117 18 chr5 167915017 167915239 -31714911 - MIR SINE MIR -2 260 17 491 272 0 25 chr5 167915686 167915848 -31714302 - Charlie8 DNA MER1_type -2189 228 71 456 304 36 101 chr5 167915996 167916272 -31713878 - L2 LINE L2 -20 3252 2995 2222 110 7 0 chr5 167916352 167916696 -31713454 - AluSx SINE Alu 0 346 1 280 331 124 16 chr5 167916709 167916830 -31713320 - MIR SINE MIR -105 157 24 713 266 97 22 chr5 167916862 167917088 -31713062 - MIR SINE MIR -11 251 9 575 313 50 0 chr5 167918657 167918855 -31711295 - MIR SINE MIR 0 262 55 606 244 18 74 chr5 167918855 167919084 -31711066 - L2 LINE L2 -1 3312 3097 1851 143 54 43 chr5 167919151 167919521 -31710629 + THE1C LTR MaLR 2 375 0 262 322 35 35 chr5 167919567 167919738 -31710412 - LTR16C LTR ERVL -13 478 308 242 319 104 28 chr5 167919778 167919922 -31710228 - LTR16C LTR ERVL -236 255 101 347 276 31 55 chr5 167920064 167920227 -31709923 - LTR50 LTR ERVL -636 159 1 754 269 127 8 chr5 167920227 167920495 -31709655 - L2 LINE L2 -995 2319 2020 605 296 153 13 chr5 167920495 167920796 -31709354 - L2 LINE L2 -2168 1146 804 2497 214 30 52 chr5 167922147 167922745 -31707405 - MER77 LTR ERV1 -20 585 1 644 291 70 29 chr5 167922926 167923170 -31706980 + MIR SINE MIR 8 261 -1 1865 169 0 3 chr5 167923700 167924002 -31706148 + AluJb SINE Alu 4 304 -8 337 226 96 68 chr5 167924210 167924356 -31705794 - Charlie7 DNA MER1_type -276 2336 2187 1044 205 0 5 chr5 167924845 167925035 -31705115 + MER5A DNA MER1_type 1 189 0 404 262 16 0 chr5 167925043 167925169 -31704981 - Charlie7 DNA MER1_type -1866 746 619 203 105 0 53 chr5 167925185 167925223 -31704927 + MER5B DNA MER1_type 137 172 -6 325 214 125 62 chr5 167925519 167925631 -31704519 + MER103 DNA DNA 32 150 -16 763 203 96 0 chr5 167925890 167926067 -31704083 + MER105 DNA DNA 11 204 0 281 306 50 0 chr5 167926215 167926336 -31703814 + LTR67 LTR ERVL 410 536 -21 22 0 0 0 chr5 167927005 167927027 -31703123 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 167928049 167928071 -31702079 + AT_rich Low_complexity Low_complexity 1 22 0 13886 186 53 2 chr5 167928071 167928418 -31701732 - L1PB1 LINE L1 0 6867 6539 351 0 0 0 chr5 167928418 167928457 -31701693 + (TAGA)n Simple_repeat Simple_repeat 3 41 0 13886 186 53 2 chr5 167928457 167932071 -31698079 - L1PB1 LINE L1 -328 6539 2716 279 0 0 0 chr5 167932071 167932102 -31698048 + (TTG)n Simple_repeat Simple_repeat 3 33 0 13886 186 53 2 chr5 167932102 167932296 -31697854 - L1PB1 LINE L1 -4151 2716 2533 2305 215 55 20 chr5 167932309 167932497 -31697653 - L1 LINE L1 -2452 4654 4474 198 0 0 0 chr5 167932497 167932519 -31697631 + (TGG)n Simple_repeat Simple_repeat 1 22 0 2305 215 55 20 chr5 167932519 167933027 -31697123 - L1 LINE L1 -2632 4474 3934 334 0 0 0 chr5 167933035 167933072 -31697078 + (TTTG)n Simple_repeat Simple_repeat 2 148 0 2014 98 29 0 chr5 167933072 167933346 -31696804 - AluSg1 SINE Alu -27 282 1 479 99 0 0 chr5 167933390 167933461 -31696689 - L1MA5A LINE L1 -5 6292 6222 189 0 0 0 chr5 167933501 167933522 -31696628 + (TAA)n Simple_repeat Simple_repeat 1 21 0 190 0 67 0 chr5 167933618 167933648 -31696502 + (CAAAAA)n Simple_repeat Simple_repeat 5 36 0 302 267 30 0 chr5 167933758 167933859 -31696291 - L1 LINE L1 -3280 3826 3723 348 189 0 0 chr5 167933872 167933946 -31696204 + (CA)n Simple_repeat Simple_repeat 2 75 0 847 209 14 58 chr5 167933949 167934182 -31695968 - L1 LINE L1 -3705 3401 3180 2677 33 0 0 chr5 167934182 167934488 -31695662 - AluY SINE Alu -5 306 1 847 209 14 58 chr5 167934488 167934531 -31695619 - L1 LINE L1 -3926 3180 3137 2393 249 68 38 chr5 167934637 167934774 -31695376 - L1 LINE L1 -4176 2930 2799 1641 178 33 40 chr5 167934774 167935077 -31695073 - AluJb SINE Alu -9 303 3 2393 249 68 38 chr5 167935077 167935546 -31694604 - L1 LINE L1 -4307 2799 2346 2332 160 35 21 chr5 167935546 167935972 -31694178 - MSTB1 LTR MaLR 0 432 1 2393 249 68 38 chr5 167935972 167936168 -31693982 - L1 LINE L1 -4760 2346 2157 2401 80 0 0 chr5 167936168 167936470 -31693680 + AluY SINE Alu 1 302 -9 2393 249 68 38 chr5 167936470 167937705 -31692445 - L1 LINE L1 -4949 2157 1 561 262 105 5 chr5 167937952 167938143 -31692007 + MER63A DNA MER1_type 1 210 0 206 197 113 28 chr5 167938598 167938669 -31691481 + MIR3 SINE MIR 115 191 -17 213 292 0 28 chr5 167939326 167939398 -31690752 + MIR3 SINE MIR 133 202 -6 482 307 74 0 chr5 167939690 167939866 -31690284 - MIR SINE MIR -61 201 13 307 339 121 29 chr5 167940350 167940524 -31689626 - MIR SINE MIR -60 202 13 343 206 33 76 chr5 167941064 167941156 -31688994 - MIR SINE MIR -59 203 116 619 280 43 0 chr5 167943052 167943238 -31686912 - MIR SINE MIR -2 260 67 21 0 0 0 chr5 167943471 167943492 -31686658 + AT_rich Low_complexity Low_complexity 1 21 0 310 352 141 9 chr5 167943505 167943718 -31686432 - L2 LINE L2 -37 3235 2995 * 386 337 72 30 chr5 167943710 167943974 -31686176 - L2 LINE L2 -837 2477 2203 207 0 0 0 chr5 167944041 167944064 -31686086 + (CA)n Simple_repeat Simple_repeat 2 24 0 332 311 29 24 chr5 167944161 167944370 -31685780 - L2 LINE L2 -1155 2159 1950 644 213 18 0 chr5 167944416 167944585 -31685565 + L1ME3A LINE L1 5767 5938 -232 213 282 8 17 chr5 167944736 167944853 -31685297 + A-rich Low_complexity Low_complexity 2 117 0 * 231 203 14 27 chr5 167944781 167944855 -31685295 + (TAA)n Simple_repeat Simple_repeat 2 74 0 2124 257 88 24 chr5 167945020 167946459 -31683691 + L1ME3A LINE L1 4625 6157 -13 326 302 60 9 chr5 167946672 167946788 -31683362 - L2 LINE L2 0 3313 3192 297 0 0 0 chr5 167947582 167947615 -31682535 + (GA)n Simple_repeat Simple_repeat 2 34 0 254 307 30 50 chr5 167947629 167947730 -31682420 - MIR SINE MIR -93 115 17 891 327 21 6 chr5 167947768 167948101 -31682049 - LTR16A LTR ERVL 0 450 113 2322 86 7 0 chr5 167949780 167950084 -31680066 + AluSx SINE Alu 5 310 -2 275 298 72 7 chr5 167950495 167950785 -31679365 - L1MDb LINE L1 -5043 1341 1029 2793 230 49 16 chr5 167950839 167951547 -31678603 + MER44D DNA MER2_type 2 605 0 804 303 29 4 chr5 167952241 167952482 -31677668 + MIR SINE MIR 2 248 -14 383 295 54 0 chr5 167952847 167952959 -31677191 - MIR3 SINE MIR -38 170 53 1663 175 9 32 chr5 167953188 167953525 -31676625 + AluJo SINE Alu 1 312 0 254 150 0 0 chr5 167953771 167953811 -31676339 + L1PA16 LINE L1 6118 6157 -9 2059 105 0 3 chr5 167954226 167954512 -31675638 - AluSx SINE Alu -27 285 1 564 194 55 18 chr5 167955147 167955312 -31674838 - L1MB8 LINE L1 -9 6169 5999 219 304 78 29 chr5 167956408 167956510 -31673640 + MIR SINE MIR 156 262 0 191 274 39 0 chr5 167956920 167956971 -31673179 + MIR SINE MIR 93 145 -63 356 291 37 26 chr5 167957497 167957689 -31672461 + MIR SINE MIR 15 212 -50 306 73 0 0 chr5 167957829 167957870 -31672280 + (CA)n Simple_repeat Simple_repeat 1 41 0 1295 107 28 0 chr5 167958460 167958637 -31671513 + AluSp SINE Alu 120 301 -12 264 311 22 44 chr5 167959882 167959972 -31670178 + MIR3 SINE MIR 81 168 -40 26 30 0 0 chr5 167960091 167960124 -31670026 + AT_rich Low_complexity Low_complexity 1 33 0 2262 136 0 0 chr5 167960130 167960438 -31669712 + AluSx SINE Alu 1 308 -4 180 0 0 0 chr5 167960438 167960458 -31669692 + (TA)n Simple_repeat Simple_repeat 2 21 0 312 274 42 11 chr5 167960526 167960621 -31669529 - L2 LINE L2 0 3272 3175 343 332 27 50 chr5 167961891 167962111 -31668039 + MIR SINE MIR 18 232 -30 26 0 0 0 chr5 167962580 167962606 -31667544 + AT_rich Low_complexity Low_complexity 1 26 0 285 75 0 0 chr5 167962755 167962795 -31667355 + (CA)n Simple_repeat Simple_repeat 1 40 0 963 193 11 6 chr5 167962826 167963007 -31667143 + MER5A DNA MER1_type 2 183 -6 234 245 59 45 chr5 167963067 167963156 -31666994 + MIR SINE MIR 61 149 -65 681 284 130 22 chr5 167963195 167963610 -31666540 + LTR16B LTR ERVL 5 464 0 320 349 146 10 chr5 167964104 167964296 -31665854 + MIR SINE MIR 45 262 0 207 0 0 0 chr5 167964706 167964729 -31665421 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1964 133 39 0 chr5 167964732 167965011 -31665139 - AluSg SINE Alu -19 291 2 2006 165 11 6 chr5 167965166 167965517 -31664633 - THE1A LTR MaLR -2 353 1 27408 128 12 62 chr5 167965886 167966298 -31663852 + L1PA7 LINE L1 1 432 -5722 455 0 18 0 chr5 167966298 167966353 -31663797 + (TTTTG)n Simple_repeat Simple_repeat 5 60 0 27408 128 12 62 chr5 167966353 167972277 -31657873 + L1PA7 LINE L1 432 6008 -146 771 183 0 0 chr5 167972380 167972500 -31657650 + AluSg/x SINE Alu 138 257 -55 242 306 0 9 chr5 167972565 167972676 -31657474 + L1ME LINE L1 5775 5884 -237 2173 113 3 7 chr5 167972742 167973042 -31657108 - AluSp SINE Alu -6 307 9 599 159 19 0 chr5 167973057 167973164 -31656986 - L1PA10 LINE L1 -5 6163 6055 273 356 75 6 chr5 167973284 167973444 -31656706 + MIR3 SINE MIR 36 206 -2 27 62 0 0 chr5 167973748 167973796 -31656354 + AT_rich Low_complexity Low_complexity 1 48 0 30759 38 2 3 chr5 167973796 167978535 -31651615 - L1PA3 LINE L1 -3 6152 1422 6437 73 25 55 chr5 167978740 167980986 -31649164 - SVA Other Other -520 1386 1 21 0 0 0 chr5 167981042 167981063 -31649087 + AT_rich Low_complexity Low_complexity 1 21 0 619 301 11 6 chr5 167981694 167981870 -31648280 + MER5A DNA MER1_type 7 183 -6 537 243 118 24 chr5 167982438 167982607 -31647543 + MIR3 SINE MIR 13 197 -11 264 59 0 0 chr5 167983139 167983173 -31646977 + (A)n Simple_repeat Simple_repeat 1 34 0 180 307 18 97 chr5 167983464 167983578 -31646572 + MIR SINE MIR 26 130 -78 41168 46 5 1 chr5 167983588 167989718 -31640432 - L1PA3 LINE L1 -3 6152 2 2161 164 53 11 chr5 167989792 167990419 -31639731 + MER39 LTR ERV1 1 707 0 1167 185 36 39 chr5 167990428 167990742 -31639408 - MER31A LTR ERV1 -30 436 114 412 283 23 98 chr5 167990848 167991113 -31639037 - L1ME3A LINE L1 0 6170 5926 1071 222 83 39 chr5 167991176 167991536 -31638614 - L1MB8 LINE L1 -19 6159 5784 413 162 0 0 chr5 167991536 167991604 -31638546 + Tigger1 DNA MER2_type 1 68 -2350 4307 242 79 17 chr5 167991604 167992762 -31637388 - L1M4b LINE L1 -5619 1240 11 398 267 28 18 chr5 167992780 167992995 -31637155 - L1ME3A LINE L1 -204 5958 5742 342 147 0 0 chr5 167993603 167993671 -31636479 + (GA)n Simple_repeat Simple_repeat 1 68 0 1624 300 73 24 chr5 167993915 167995923 -31634227 - L1ME3A LINE L1 -540 5630 3520 1062 238 84 6 chr5 167995997 167996308 -31633842 - MER46C DNA MER2_type 0 338 4 277 258 81 8 chr5 167997376 167997500 -31632650 + L1ME LINE L1 5530 5662 -459 313 303 229 20 chr5 167997534 167997778 -31632372 - L2 LINE L2 -5 3308 3014 1360 315 130 11 chr5 167997916 167998527 -31631623 + L2 LINE L2 2316 2992 -321 2460 93 54 84 chr5 167998577 167999018 -31631132 - LTR12 LTR ERV1 -234 480 53 248 231 0 0 chr5 167999018 167999070 -31631080 - LTR30 LTR ERV1 -670 52 1 476 239 72 43 chr5 167999127 167999265 -31630885 + L2 LINE L2 3172 3313 0 282 281 22 22 chr5 167999613 167999702 -31630448 + L3 LINE CR1 877 965 -612 605 304 95 49 chr5 168000081 168000407 -31629743 + L3 LINE CR1 1230 1570 -7 2127 112 44 0 chr5 168000558 168000853 -31629297 - AluSx SINE Alu -4 308 1 926 229 104 17 chr5 168000951 168001248 -31628902 - MER2 DNA MER2_type -22 323 1 201 74 0 0 chr5 168001964 168001991 -31628159 + (TG)n Simple_repeat Simple_repeat 2 28 0 771 258 79 17 chr5 168002064 168002304 -31627846 + MIR SINE MIR 8 262 0 250 224 0 0 chr5 168002313 168002371 -31627779 + MIR SINE MIR 72 129 -79 22 0 0 0 chr5 168002531 168002553 -31627597 + AT_rich Low_complexity Low_complexity 1 22 0 447 325 108 52 chr5 168003505 168003654 -31626496 - L3 LINE CR1 -24 1553 1385 2183 122 3 3 chr5 168003654 168003957 -31626193 - AluSc SINE Alu -6 303 1 447 325 108 52 chr5 168003957 168004038 -31626112 - L3 LINE CR1 -192 1385 1310 414 94 0 0 chr5 168004550 168004614 -31625536 + (TG)n Simple_repeat Simple_repeat 2 65 0 24 77 0 0 chr5 168005255 168005307 -31624843 + AT_rich Low_complexity Low_complexity 1 52 0 274 37 0 93 chr5 168005363 168005417 -31624733 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 207 218 26 58 chr5 168005553 168005709 -31624441 + (TATATG)n Simple_repeat Simple_repeat 3 153 0 264 245 233 12 chr5 168006861 168006968 -31623182 + MIR SINE MIR 30 150 -63 675 261 118 53 chr5 168007041 168007162 -31622988 + LTR16C LTR ERVL 89 201 -290 2049 116 4 4 chr5 168007162 168007439 -31622711 - AluSq SINE Alu -36 277 1 675 261 118 53 chr5 168007439 168007674 -31622476 + LTR16C LTR ERVL 201 468 -23 420 288 59 17 chr5 168007740 168007858 -31622292 + L2 LINE L2 3150 3272 0 39597 43 26 1 chr5 168008473 168014476 -31615674 + L1PA2 LINE L1 1 6152 -3 188 35 35 0 chr5 168014492 168014521 -31615629 + (TAAAA)n Simple_repeat Simple_repeat 3 32 0 2132 113 0 0 chr5 168014729 168015013 -31615137 - AluSx SINE Alu -27 285 2 384 285 46 15 chr5 168015016 168015146 -31615004 - MIR SINE MIR -59 149 16 191 260 78 39 chr5 168015560 168015637 -31614513 + L2 LINE L2 3193 3272 0 205 226 20 49 chr5 168015817 168015919 -31614231 + (TTCA)n Simple_repeat Simple_repeat 3 101 0 19870 115 8 18 chr5 168016263 168017058 -31613092 - L1PA7 LINE L1 -1 6153 5351 2369 90 13 0 chr5 168017058 168017357 -31612793 - AluSp SINE Alu -10 303 1 19870 115 8 18 chr5 168017357 168020808 -31609342 - L1PA7 LINE L1 -803 5351 1944 9921 181 8 4 chr5 168020917 168024023 -31606127 + L1PB1 LINE L1 3001 6119 -32 1165 175 42 23 chr5 168024174 168024437 -31605713 + MER4E LTR ERV1 501 768 -11 465 19 0 0 chr5 168025115 168025169 -31604981 + (TG)n Simple_repeat Simple_repeat 2 55 0 237 159 0 0 chr5 168025594 168025638 -31604512 + GA-rich Low_complexity Low_complexity 2 45 0 1314 214 0 0 chr5 168026623 168026857 -31603293 - AluSx SINE Alu -78 234 1 1975 139 17 0 chr5 168026994 168027289 -31602861 + AluSx SINE Alu 1 300 -12 294 283 65 60 chr5 168027309 168027493 -31602657 + L2 LINE L2 3128 3312 -1 370 138 0 0 chr5 168027510 168027568 -31602582 + AluJ/FLAM SINE Alu 1 58 -244 218 146 0 0 chr5 168027979 168028020 -31602130 + (T)n Simple_repeat Simple_repeat 1 41 0 237 231 19 0 chr5 168028593 168028645 -31601505 + GA-rich Low_complexity Low_complexity 3 55 0 296 24 0 24 chr5 168028688 168028730 -31601420 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1450 193 7 7 chr5 168028884 168029164 -31600986 + AluJb SINE Alu 5 284 -28 2599 59 0 0 chr5 168029745 168030048 -31600102 + AluY SINE Alu 1 303 -8 14365 106 8 14 chr5 168030427 168031067 -31599083 - L1PA7 LINE L1 -165 5989 5347 2360 83 13 7 chr5 168031067 168031367 -31598783 - AluSp SINE Alu -11 302 1 14365 106 8 14 chr5 168031367 168033584 -31596566 - L1PA7 LINE L1 -807 5347 3143 15598 35 4 0 chr5 168033772 168037338 -31592812 + L1PA2 LINE L1 2576 6152 -3 188 35 35 0 chr5 168037354 168037383 -31592767 + (TAAAA)n Simple_repeat Simple_repeat 3 32 0 2096 120 0 0 chr5 168037591 168037875 -31592275 - AluSx SINE Alu -27 285 2 384 285 46 15 chr5 168037878 168038008 -31592142 - MIR SINE MIR -59 149 16 191 260 78 39 chr5 168038422 168038499 -31591651 + L2 LINE L2 3193 3272 0 204 295 9 18 chr5 168038653 168038765 -31591385 + (TTTA)n Simple_repeat Simple_repeat 1 111 0 * 212 256 11 22 chr5 168038684 168038774 -31591376 + (TTCA)n Simple_repeat Simple_repeat 1 89 0 3657 96 8 46 chr5 168039179 168039833 -31590317 - L1PA7 LINE L1 0 6154 5526 356 277 9 9 chr5 168040510 168040622 -31589528 - MLT1A2 LTR MaLR -90 284 173 216 264 0 0 chr5 168040622 168040675 -31589475 + GA-rich Low_complexity Low_complexity 2 54 0 707 130 45 45 chr5 168040697 168040851 -31589299 - MLT1A2 LTR MaLR -220 154 1 8803 144 19 32 chr5 168041221 168043544 -31586606 - L1P3 LINE L1 -3456 3005 717 414 151 0 0 chr5 168045819 168045892 -31584258 + (CA)n Simple_repeat Simple_repeat 2 74 0 283 213 7 136 chr5 168045919 168046074 -31584076 + L1ME4a LINE L1 5689 5823 -298 316 153 12 82 chr5 168046375 168046460 -31583690 + L1ME4a LINE L1 6017 6095 -26 198 42 62 42 chr5 168046468 168046516 -31583634 + T-rich Low_complexity Low_complexity 2 50 0 185 222 0 19 chr5 168046746 168046800 -31583350 + (CATA)n Simple_repeat Simple_repeat 4 56 0 417 241 35 21 chr5 168047202 168047347 -31582803 - LTR33 LTR ERVL -10 511 365 705 238 95 39 chr5 168047350 168047836 -31582314 - MER69 DNA AcHobo -2 2524 2010 * 938 238 156 71 chr5 168047834 168048216 -31581934 - MER69 DNA AcHobo -1958 568 133 1872 239 96 28 chr5 168048216 168048798 -31581352 - MLT1E2 LTR MaLR -4 622 1 938 238 156 71 chr5 168048798 168048910 -31581240 - MER69 DNA AcHobo -2393 133 32 611 280 80 12 chr5 168048998 168049248 -31580902 - LTR33 LTR ERVL -254 267 1 335 356 71 46 chr5 168049483 168050031 -31580119 + L2 LINE L2 2298 2859 -455 687 222 69 0 chr5 168050128 168050272 -31579878 + MER63A DNA MER1_type 57 210 0 486 317 49 11 chr5 168050882 168051065 -31579085 + MIR SINE MIR 32 221 -41 838 206 0 38 chr5 168052063 168052247 -31577903 + MER5B DNA MER1_type 1 177 -1 863 209 166 74 chr5 168052369 168052761 -31577389 + MLT1F1 LTR MaLR 67 494 -73 230 232 0 43 chr5 168052767 168052836 -31577314 + GA-rich Low_complexity Low_complexity 2 67 0 404 366 77 0 chr5 168053077 168053271 -31576879 - MIR SINE MIR -6 256 48 21 0 0 0 chr5 168053333 168053354 -31576796 + AT_rich Low_complexity Low_complexity 1 21 0 383 292 67 8 chr5 168053393 168053513 -31576637 - MIR3 SINE MIR -21 187 61 808 285 63 39 chr5 168053606 168054016 -31576134 - L2 LINE L2 0 3313 2894 273 250 13 26 chr5 168054014 168054090 -31576060 + MIR SINE MIR 70 144 -64 * 291 216 0 0 chr5 168054106 168054157 -31575993 + L2 LINE L2 3220 3270 -2 422 266 203 37 chr5 168054777 168055048 -31575102 - L2 LINE L2 -3 3310 2995 717 211 13 7 chr5 168055238 168055390 -31574760 - MER20 DNA MER1_type -1 218 66 625 182 10 131 chr5 168055554 168055682 -31574468 + MER69A DNA AcHobo 4 101 -2425 2274 102 23 0 chr5 168055682 168055986 -31574164 - AluSp SINE Alu -2 311 1 625 182 10 131 chr5 168055986 168056055 -31574095 + MER69A DNA AcHobo 101 177 0 219 298 84 61 chr5 168056243 168056374 -31573776 + L2 LINE L2 3179 3312 -1 938 220 11 0 chr5 168056406 168056592 -31573558 + MER5A DNA MER1_type 1 188 -1 376 326 31 62 chr5 168056612 168056805 -31573345 - MIR SINE MIR -56 206 20 183 337 12 12 chr5 168057969 168058055 -31572095 + MER5B DNA MER1_type 63 148 -30 857 158 37 56 chr5 168058123 168058467 -31571683 + MER96B DNA MER1_type? 10 402 -15 695 226 35 4 chr5 168059829 168060055 -31570095 - Charlie4a DNA MER1_type -9 499 267 756 213 102 0 chr5 168060163 168060379 -31569771 - Charlie4a DNA MER1_type -246 262 25 565 222 57 17 chr5 168060565 168060741 -31569409 + L1ME LINE L1 5519 5701 -420 689 353 57 22 chr5 168061114 168061620 -31568530 - L2 LINE L2 -35 3278 2752 293 272 112 73 chr5 168061708 168062071 -31568079 + MLT1H LTR MaLR 114 549 0 580 340 20 10 chr5 168062078 168062281 -31567869 - L2 LINE L2 -556 2758 2554 425 348 59 30 chr5 168062318 168062588 -31567562 - L3 LINE CR1 -125 1452 1175 219 317 77 10 chr5 168062662 168062766 -31567384 + L2 LINE L2 3161 3271 -1 244 122 0 41 chr5 168062767 168062816 -31567334 - L3 LINE CR1 -318 1259 1213 330 245 20 10 chr5 168064056 168064154 -31565996 + GA-rich Low_complexity Low_complexity 2 100 0 311 256 76 98 chr5 168064371 168064548 -31565602 - MIR SINE MIR -56 206 23 188 310 40 20 chr5 168064771 168064871 -31565279 - L2 LINE L2 -249 3023 2922 435 297 83 16 chr5 168064906 168065098 -31565052 + L2 LINE L2 2514 2718 -596 299 359 7 14 chr5 168065117 168065259 -31564891 + L2 LINE L2 2845 2985 -328 376 264 38 0 chr5 168065319 168065425 -31564725 + MIR SINE MIR 7 116 -146 286 430 9 9 chr5 168065663 168065777 -31564373 + L2 LINE L2 3136 3249 -23 3308 202 48 25 chr5 168067160 168068067 -31562083 + MER63C DNA MER1_type 3 930 0 350 341 60 0 chr5 168068183 168068400 -31561750 + LTR16A LTR ERVL 145 374 -76 272 247 14 14 chr5 168068873 168068946 -31561204 - L2 LINE L2 -213 3059 2987 217 217 203 0 chr5 168069446 168069515 -31560635 + L2 LINE L2 3227 3309 -4 313 294 163 0 chr5 168069769 168069922 -31560228 + MIR SINE MIR 75 252 -10 319 269 77 48 chr5 168070092 168070196 -31559954 + MIR3 SINE MIR 4 110 -98 * 685 277 130 72 chr5 168070184 168070696 -31559454 - L2 LINE L2 -3 3310 2755 542 299 86 14 chr5 168070941 168071162 -31558988 + MIR SINE MIR 16 252 -10 281 231 149 43 chr5 168072369 168072492 -31557658 + L1MC5 LINE L1 7629 7738 -223 2428 116 34 3 chr5 168072492 168072845 -31557305 - THE1B LTR MaLR 0 364 1 281 231 149 43 chr5 168072845 168072976 -31557174 + L1MC5 LINE L1 7738 7910 -51 794 347 106 19 chr5 168073376 168074103 -31556047 + L3 LINE CR1 622 1411 -166 818 146 62 31 chr5 168074165 168074245 -31555905 + MER33 DNA MER1_type 26 102 -2483 1418 233 77 29 chr5 168074245 168074623 -31555527 + MSTD LTR MaLR 1 396 0 818 146 62 31 chr5 168074623 168074734 -31555416 + MER33 DNA MER1_type 102 223 -101 952 161 0 62 chr5 168074734 168074926 -31555224 + AluJo SINE Alu 86 265 -47 333 0 0 0 chr5 168074942 168074979 -31555171 + (TG)n Simple_repeat Simple_repeat 2 38 0 234 121 69 0 chr5 168074992 168075050 -31555100 + (TA)n Simple_repeat Simple_repeat 2 63 0 386 164 62 39 chr5 168075065 168075193 -31554957 + MER33 DNA MER1_type 194 324 0 502 271 66 6 chr5 168075286 168075452 -31554698 + MIR3 SINE MIR 30 205 -3 231 328 120 8 chr5 168075708 168075833 -31554317 - MIR SINE MIR -5 257 119 774 266 36 40 chr5 168076333 168076585 -31553565 - MIR SINE MIR 0 262 12 453 103 0 0 chr5 168076595 168076663 -31553487 + (TGGA)n Simple_repeat Simple_repeat 4 71 0 233 315 133 39 chr5 168077997 168078200 -31551950 + L2 LINE L2 2836 3057 -215 225 351 71 26 chr5 168078293 168078447 -31551703 + L2 LINE L2 3107 3267 -5 208 130 43 0 chr5 168078493 168078539 -31551611 + GA-rich Low_complexity Low_complexity 2 49 0 419 278 15 116 chr5 168078704 168078902 -31551248 - MER5A DNA MER1_type 0 189 12 200 357 107 0 chr5 168079516 168079656 -31550494 + L2 LINE L2 1932 2086 -1228 304 271 12 90 chr5 168079938 168080104 -31550046 + MIR SINE MIR 106 258 -4 180 176 0 0 chr5 168080134 168080168 -31549982 + (CAT)n Simple_repeat Simple_repeat 2 35 0 817 179 92 49 chr5 168080274 168080661 -31549489 + LTR53 LTR ERVL 1 508 -11 297 0 0 0 chr5 168081429 168081462 -31548688 + (TG)n Simple_repeat Simple_repeat 1 33 0 2622 23 0 10 chr5 168081993 168082297 -31547853 - AluYa5 SINE Alu -10 301 1 303 308 27 39 chr5 168082765 168083029 -31547121 - LTR16C LTR ERVL 0 491 181 236 335 113 81 chr5 168083174 168083488 -31546662 - L3 LINE CR1 -4 1573 1238 2464 213 63 4 chr5 168083488 168083999 -31546151 + MLT1F LTR MaLR 1 541 -1 236 335 113 81 chr5 168083999 168084143 -31546007 - L3 LINE CR1 -339 1238 1100 337 249 70 75 chr5 168084152 168084365 -31545785 - MLT1K LTR MaLR 0 588 377 626 331 31 23 chr5 168085177 168085434 -31544716 + MIR SINE MIR 1 259 -3 42082 38 1 2 chr5 168085727 168091872 -31538278 + L1PA4 LINE L1 13 6152 -3 22 0 0 0 chr5 168092283 168092305 -31537845 + AT_rich Low_complexity Low_complexity 1 22 0 280 306 129 0 chr5 168092472 168092596 -31537554 - MER117 DNA MER1_type -49 148 9 2216 172 76 24 chr5 168092834 168092971 -31537179 - L1MB7 LINE L1 -21 6163 6027 1774 244 62 4 chr5 168092971 168093914 -31536236 - L1MD3 LINE L1 -743 5403 4999 370 161 32 65 chr5 168093908 168094032 -31536118 - L1M4c LINE L1 -4240 2406 2287 * 2069 208 49 64 chr5 168094069 168094514 -31535636 - L1M4c LINE L1 -5053 1489 1039 1853 156 3 45 chr5 168094514 168094828 -31535322 + AluJb SINE Alu 3 303 -9 2069 208 49 64 chr5 168094828 168095753 -31534397 - L1M4c LINE L1 -5503 1039 2 732 342 57 50 chr5 168095808 168096337 -31533813 + L2 LINE L2 2770 3311 -2 315 281 31 31 chr5 168096558 168096654 -31533496 + MIR3 SINE MIR 85 180 -28 1123 187 9 14 chr5 168097751 168097970 -31532180 - MER20 DNA MER1_type 0 219 2 277 250 0 0 chr5 168098168 168098228 -31531922 - MIR SINE MIR -43 219 160 582 286 100 43 chr5 168098340 168098571 -31531579 + MIR SINE MIR 1 244 -18 2219 114 30 0 chr5 168098728 168099025 -31531125 - AluSg SINE Alu -4 306 1 225 382 39 0 chr5 168099094 168099196 -31530954 - MIR SINE MIR -61 147 42 342 0 0 0 chr5 168099792 168099830 -31530320 + (CA)n Simple_repeat Simple_repeat 2 39 0 678 279 91 69 chr5 168100169 168100621 -31529529 + MLT1J LTR MaLR 1 462 -49 2220 113 7 3 chr5 168100665 168100975 -31529175 + AluSq SINE Alu 1 311 -2 191 32 65 0 chr5 168100980 168101011 -31529139 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 267 319 0 0 chr5 168101406 168101475 -31528675 - L3 LINE CR1 -948 629 561 303 28 0 0 chr5 168101555 168101591 -31528559 + (CA)n Simple_repeat Simple_repeat 1 36 0 1031 216 9 22 chr5 168101669 168101896 -31528254 + MER58A DNA MER1_type 1 224 0 548 217 71 96 chr5 168101905 168102145 -31528005 - MER106A DNA MER1_type -1 235 2 928 214 18 40 chr5 168102154 168102378 -31527772 - MER20 DNA MER1_type 0 219 1 189 0 0 0 chr5 168102827 168102848 -31527302 + (A)n Simple_repeat Simple_repeat 1 21 0 312 327 0 47 chr5 168103804 168103911 -31526239 + MIR SINE MIR 30 131 -77 420 291 150 12 chr5 168103957 168104211 -31525939 - MLT1K LTR MaLR -116 472 184 226 306 35 69 chr5 168104952 168105096 -31525054 + MIR SINE MIR 83 221 -41 4436 198 63 19 chr5 168105731 168106384 -31523766 + Tigger6a DNA MER2_type 1 717 -880 1966 132 54 0 chr5 168106384 168106680 -31523470 + AluSx SINE Alu 1 312 0 4436 198 63 19 chr5 168106680 168107061 -31523089 + Tigger6a DNA MER2_type 717 1080 -3 22 80 0 0 chr5 168107384 168107434 -31522716 + AT_rich Low_complexity Low_complexity 1 50 0 1186 196 9 22 chr5 168107945 168108169 -31521981 + MER58A DNA MER1_type 4 224 0 373 324 0 0 chr5 168109915 168110020 -31520130 + MIR3 SINE MIR 81 185 -23 277 294 37 72 chr5 168110205 168110362 -31519788 - MIR SINE MIR -70 138 28 265 300 62 0 chr5 168111071 168111151 -31518999 + MER5A DNA MER1_type 105 189 0 1338 175 30 10 chr5 168112654 168112957 -31517193 + L1MD3 LINE L1 6801 7109 -886 323 242 11 22 chr5 168112962 168113053 -31517097 + MLT1F1 LTR MaLR 33 122 -445 1147 195 29 107 chr5 168113053 168113464 -31516686 + L1MD3 LINE L1 7402 7780 -215 219 246 0 0 chr5 168113923 168113980 -31516170 + (CA)n Simple_repeat Simple_repeat 2 58 0 224 283 184 46 chr5 168114190 168114342 -31515808 - MIR SINE MIR -89 173 1 235 283 181 0 chr5 168114401 168114539 -31515611 - L1ME LINE L1 -417 5704 5542 551 394 62 27 chr5 168114766 168115058 -31515092 - L2 LINE L2 0 3272 2971 2321 64 0 3 chr5 168115099 168115410 -31514740 - AluY SINE Alu 0 310 1 463 246 180 62 chr5 168115853 168116097 -31514053 - MLT1H LTR MaLR -127 422 150 312 287 69 38 chr5 168116522 168116839 -31513311 - L1ME LINE L1 -2090 4056 3730 32025 108 10 9 chr5 168118423 168124422 -31505728 - L1PA4 LINE L1 -7 6148 11 1570 205 0 8 chr5 168124432 168124783 -31505367 + L1 LINE L1 2324 2671 -3475 207 0 0 0 chr5 168125153 168125176 -31504974 + (A)n Simple_repeat Simple_repeat 1 23 0 2887 159 14 108 chr5 168125211 168125390 -31504760 - LTR26 LTR ERV1 -1 602 408 216 0 0 0 chr5 168125390 168125414 -31504736 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1711 115 50 57 chr5 168125416 168125695 -31504455 - AluSg SINE Alu -33 277 1 2887 159 14 108 chr5 168125695 168126177 -31503973 - LTR26 LTR ERV1 -196 407 1 2421 69 3 0 chr5 168126582 168126885 -31503265 - AluY SINE Alu -7 304 1 205 298 36 24 chr5 168126986 168127070 -31503080 + MIR SINE MIR 38 122 -140 930 259 0 30 chr5 168127722 168127985 -31502165 + AluJo SINE Alu 1 255 -57 2973 167 18 14 chr5 168127985 168128504 -31501646 - LTR26 LTR ERV1 0 603 80 1747 181 77 48 chr5 168128504 168128919 -31501231 + MSTA LTR MaLR 2 428 0 2973 167 18 14 chr5 168128919 168128951 -31501199 - LTR26 LTR ERV1 -523 80 50 1436 220 94 13 chr5 168128951 168129324 -31500826 + MSTB LTR MaLR 1 403 -23 1732 135 138 39 chr5 168129324 168129738 -31500412 - MER4A LTR ERV1 0 664 122 2172 121 3 0 chr5 168129738 168130035 -31500115 - AluSp SINE Alu -15 298 1 1732 135 138 39 chr5 168130035 168130171 -31499979 - MER4A LTR ERV1 -542 122 1 7646 128 40 43 chr5 168130176 168131816 -31498334 - MER4A-int LTR ERV1 -1 6597 4930 2196 105 13 3 chr5 168132096 168132400 -31497750 - AluSg SINE Alu -3 307 1 1584 183 9 43 chr5 168132404 168132727 -31497423 - AluJo SINE Alu 0 312 1 1946 149 16 7 chr5 168132793 168133102 -31497048 - AluSx SINE Alu 0 312 1 188 321 83 49 chr5 168133159 168133424 -31496726 + L2 LINE L2 3035 3308 -5 1506 188 30 10 chr5 168133440 168133743 -31496407 + AluJo SINE Alu 1 309 -3 5236 155 40 21 chr5 168133743 168134538 -31495612 - MER4-int LTR ERV1 -1478 5120 4293 1547 157 45 11 chr5 168134538 168134824 -31495326 + AluSx SINE Alu 1 296 -16 5236 155 40 21 chr5 168134824 168135155 -31494995 - MER4-int LTR ERV1 -2305 4293 3970 677 172 156 5 chr5 168135856 168136042 -31494108 - L1MB3 LINE L1 -14 6169 5956 701 148 0 0 chr5 168136157 168136258 -31493892 + AluSg/x SINE Alu 179 279 -33 216 0 0 0 chr5 168136260 168136284 -31493866 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 730 186 11 57 chr5 168136286 168136463 -31493687 + LTR26 LTR ERV1 434 602 -1 207 0 0 0 chr5 168136498 168136521 -31493629 + (T)n Simple_repeat Simple_repeat 1 23 0 213 91 0 152 chr5 168136679 168136694 -31493456 + (T)n Simple_repeat Simple_repeat 1 17 -39 3471 65 9 16 chr5 168136694 168137137 -31493013 - SVA Other Other -3 1383 944 213 91 0 152 chr5 168137137 168137165 -31492985 + (T)n Simple_repeat Simple_repeat 17 33 -23 3741 50 9 0 chr5 168137165 168137601 -31492549 - SVA Other Other -3 1383 944 213 91 0 152 chr5 168137601 168137622 -31492528 + (T)n Simple_repeat Simple_repeat 33 56 0 7775 48 3 30 chr5 168137629 168139210 -31490940 - SVA Other Other -799 1383 4 260 183 46 150 chr5 168139210 168139363 -31490787 - MER104 DNA Tc2 -39 141 5 23 0 0 0 chr5 168139446 168139469 -31490681 + AT_rich Low_complexity Low_complexity 1 23 0 186 281 58 33 chr5 168140662 168140783 -31489367 + L2 LINE L2 2851 2974 -298 617 308 16 0 chr5 168141062 168141244 -31488906 + MIR SINE MIR 41 225 -37 192 349 35 0 chr5 168141357 168141443 -31488707 + MIR3 SINE MIR 101 189 -19 289 322 33 0 chr5 168141526 168141616 -31488534 - MIR SINE MIR -71 137 45 255 263 212 0 chr5 168141732 168141831 -31488319 - MIR3 SINE MIR -3 205 86 201 276 35 0 chr5 168142130 168142188 -31487962 - L2 LINE L2 -39 3274 3215 187 324 95 9 chr5 168142662 168142767 -31487383 - MIR SINE MIR -79 129 16 574 203 9 19 chr5 168143140 168143370 -31486780 + MLT1H1 LTR MaLR 296 555 0 242 286 16 0 chr5 168143376 168143439 -31486711 + L2 LINE L2 3244 3307 -6 258 284 119 40 chr5 168143512 168143688 -31486462 - MIR SINE MIR -72 190 1 321 348 43 11 chr5 168144396 168144583 -31485567 + L2 LINE L2 2554 2746 -568 299 232 36 129 chr5 168145258 168145440 -31484710 + L1ME LINE L1 5348 5507 -659 4801 70 23 0 chr5 168145440 168146059 -31484091 - L1PA6 LINE L1 0 6154 5522 299 232 36 129 chr5 168146059 168146100 -31484050 + L1ME LINE L1 5507 5550 -616 676 87 26 9 chr5 168146206 168146321 -31483829 - AluY SINE Alu -76 235 119 197 284 27 14 chr5 168146420 168146494 -31483656 + MIR SINE MIR 47 121 -141 2148 107 4 0 chr5 168146838 168147119 -31483031 + AluSg SINE Alu 1 282 -28 207 88 0 0 chr5 168147119 168147153 -31482997 + (CA)n Simple_repeat Simple_repeat 2 35 0 2115 115 10 0 chr5 168147554 168147849 -31482301 + AluSq SINE Alu 1 298 -15 1521 218 61 32 chr5 168148140 168148599 -31481551 + MER41B LTR ERV1 109 486 0 261 65 87 0 chr5 168148918 168148964 -31481186 + L1MB4 LINE L1 6130 6179 -1 1104 134 10 40 chr5 168149672 168149874 -31480276 + MSTC LTR MaLR 1 196 -232 1209 207 33 4 chr5 168150239 168150510 -31479640 + L1MD3 LINE L1 7717 7995 0 219 246 0 0 chr5 168151125 168151182 -31478968 + (CA)n Simple_repeat Simple_repeat 2 58 0 253 267 180 6 chr5 168151580 168151741 -31478409 - L1ME LINE L1 -391 5730 5542 192 365 47 7 chr5 168151968 168152116 -31478034 - L2 LINE L2 0 3313 3160 2706 26 0 3 chr5 168152307 168152612 -31477538 - AluY SINE Alu -7 304 1 1276 94 86 39 chr5 168153158 168153392 -31476758 - L1P4 LINE L1 -393 5770 5526 2040 124 0 7 chr5 168153692 168153997 -31476153 + AluSg SINE Alu 2 304 0 380 266 46 28 chr5 168154411 168154520 -31475630 - MLT1A2 LTR MaLR -90 284 174 198 209 0 0 chr5 168154521 168154564 -31475586 + GA-rich Low_complexity Low_complexity 2 44 0 658 176 61 34 chr5 168154598 168154746 -31475404 - MLT1A2 LTR MaLR -222 152 1 222 37 0 0 chr5 168154878 168154905 -31475245 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 2199 176 19 24 chr5 168154931 168155352 -31474798 - LTR57-int LTR ERVL -3512 1831 1413 189 0 0 0 chr5 168155528 168155549 -31474601 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1371 184 75 18 chr5 168155594 168155872 -31474278 + L1PA16 LINE L1 5859 6152 -14 216 0 0 0 chr5 168156981 168157005 -31473145 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 278 269 0 0 chr5 168157441 168157508 -31472642 - L1M4 LINE L1 -1840 4306 4240 3686 162 25 31 chr5 168157662 168158464 -31471686 + MER4-int LTR ERV1 4313 5109 -1489 1746 194 3 0 chr5 168158472 168158776 -31471374 - AluJo SINE Alu -7 305 1 1986 139 17 0 chr5 168158996 168159291 -31470859 - AluSx SINE Alu -12 300 1 1493 186 10 23 chr5 168159467 168159773 -31470377 + AluSx SINE Alu 11 312 0 603 222 0 22 chr5 168159840 168159975 -31470175 + FLAM_C SINE Alu 1 132 -1 907 177 79 129 chr5 168159981 168160298 -31469852 + AluJb SINE Alu 2 302 0 1799 178 3 34 chr5 168160482 168160777 -31469373 - MER1B DNA MER1_type -2373 339 55 2284 86 122 0 chr5 168160777 168161113 -31469037 - MER51B LTR ERV1 0 377 1 1799 178 3 34 chr5 168161113 168161166 -31468984 - MER1B DNA MER1_type -2657 55 2 30 59 0 0 chr5 168161977 168162028 -31468122 + AT_rich Low_complexity Low_complexity 1 51 0 1684 125 32 0 chr5 168162180 168162459 -31467691 - L1PA13 LINE L1 -3 6160 5873 2199 114 0 3 chr5 168163931 168164228 -31465922 + AluSg SINE Alu 8 303 -7 1868 148 3 40 chr5 168164238 168164562 -31465588 + AluSx SINE Alu 1 312 0 1345 154 202 4 chr5 168165620 168165873 -31464277 + AluSx SINE Alu 2 304 -8 539 326 36 10 chr5 168165999 168166300 -31463850 + L2 LINE L2 1785 2093 -1221 2139 205 14 70 chr5 168166484 168167001 -31463149 - LTR64 LTR ERVK -70 488 1 760 208 30 6 chr5 168167001 168167169 -31462981 + MER3 DNA MER1_type 34 205 -4 23 62 0 0 chr5 168167667 168167699 -31462451 + AT_rich Low_complexity Low_complexity 1 32 0 442 255 102 32 chr5 168168014 168168341 -31461809 - L1 LINE L1 -3336 2810 2450 336 174 3 31 chr5 168168504 168168590 -31461560 - MER4C LTR ERV1 0 610 383 1603 149 57 19 chr5 168168770 168169086 -31461064 - MER4A LTR ERV1 -336 328 1 22 35 0 0 chr5 168169275 168169304 -31460846 + AT_rich Low_complexity Low_complexity 1 29 0 777 249 6 0 chr5 168169343 168169512 -31460638 + MER58B DNA MER1_type 172 341 0 1396 120 5 0 chr5 168169741 168169932 -31460218 + AluSg/x SINE Alu 108 299 -13 392 297 24 36 chr5 168169969 168170134 -31460016 + LTR33 LTR ERVL 3 165 -356 692 181 9 159 chr5 168170217 168170342 -31459808 + AluJo SINE Alu 11 87 -225 2177 100 28 3 chr5 168170342 168170631 -31459519 + AluSq SINE Alu 1 296 -17 692 181 9 159 chr5 168170631 168170737 -31459413 + AluJo SINE Alu 87 207 -105 1015 153 21 168 chr5 168171234 168171567 -31458583 + MLT1A2 LTR MaLR 1 284 -90 3880 136 11 0 chr5 168172237 168172862 -31457288 + L1PA13 LINE L1 5526 6157 -6 29 60 0 0 chr5 168173020 168173070 -31457080 + AT_rich Low_complexity Low_complexity 1 50 0 210 128 0 0 chr5 168173778 168173817 -31456333 + (T)n Simple_repeat Simple_repeat 1 39 0 180 245 0 0 chr5 168174392 168174445 -31455705 + GA-rich Low_complexity Low_complexity 3 55 0 1260 220 14 4 chr5 168174652 168174929 -31455221 + AluJb SINE Alu 5 284 -28 2091 122 10 3 chr5 168176229 168176532 -31453618 - AluSp SINE Alu -8 305 1 317 217 0 0 chr5 168177286 168177346 -31452804 + MER75 DNA T2_type 1 60 -454 1986 149 3 10 chr5 168177365 168177673 -31452477 - AluSq SINE Alu -5 308 3 181 323 62 23 chr5 168179066 168179196 -31450954 - MIR SINE MIR -119 143 9 1858 164 0 43 chr5 168179213 168179536 -31450614 - AluJb SINE Alu -3 309 1 1969 131 28 0 chr5 168179800 168180091 -31450059 - AluSq SINE Alu -14 299 1 1750 97 4 50 chr5 168180557 168180815 -31449335 + AluSc SINE Alu 1 246 -63 573 189 92 51 chr5 168180939 168181135 -31449015 + AluJb SINE Alu 93 296 -16 1352 173 69 28 chr5 168181181 168181470 -31448680 + L1PA16 LINE L1 5859 6159 -7 2210 103 7 0 chr5 168182683 168182985 -31447165 + AluSq SINE Alu 1 304 -9 2207 270 37 36 chr5 168183305 168183821 -31446329 - L1M4 LINE L1 -1842 4304 3785 2398 69 0 23 chr5 168183821 168184124 -31446026 - AluY SINE Alu -15 296 1 2207 270 37 36 chr5 168184124 168184438 -31445712 - L1M4 LINE L1 -2361 3785 3473 281 217 33 0 chr5 168184549 168184609 -31445541 + AluS SINE Alu 11 72 -231 2058 104 17 0 chr5 168184786 168185073 -31445077 + AluSx SINE Alu 1 292 -20 1671 164 119 18 chr5 168185418 168185829 -31444321 - MER61D LTR ERV1 0 501 1 2144 77 22 0 chr5 168186325 168186619 -31443531 + AluSc SINE Alu 1 300 0 615 265 41 6 chr5 168187341 168187511 -31442639 + MER90 LTR ERV1 439 614 0 2207 69 3 14 chr5 168187616 168187906 -31442244 + AluY SINE Alu 1 287 -24 207 0 0 0 chr5 168187917 168187940 -31442210 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1110 143 0 24 chr5 168187940 168188108 -31442042 + AluSg/x SINE Alu 125 288 -22 261 98 0 0 chr5 168188480 168188521 -31441629 + (A)n Simple_repeat Simple_repeat 1 41 0 219 241 48 41 chr5 168188590 168188735 -31441415 + (CAGAG)n Simple_repeat Simple_repeat 4 149 0 189 250 0 0 chr5 168188758 168188834 -31441316 + A-rich Low_complexity Low_complexity 1 76 0 331 352 0 0 chr5 168188852 168189028 -31441122 + A-rich Low_complexity Low_complexity 1 176 0 1978 121 3 10 chr5 168189139 168189429 -31440721 - AluSx SINE Alu -24 288 1 21 0 0 0 chr5 168190067 168190088 -31440062 + AT_rich Low_complexity Low_complexity 1 21 0 1219 95 4 1 chr5 168190800 168191046 -31439104 + AluSc SINE Alu 2 278 -31 216 0 0 0 chr5 168191047 168191071 -31439079 + (GA)n Simple_repeat Simple_repeat 1 24 0 3653 172 28 18 chr5 168191305 168192091 -31438059 + L1MB3 LINE L1 5181 5976 -207 1247 72 55 0 chr5 168192316 168192497 -31437653 + AluY SINE Alu 119 309 -2 2164 96 38 0 chr5 168192554 168192847 -31437303 - AluSp SINE Alu -8 305 2 669 284 64 23 chr5 168194976 168195318 -31434832 + L1M4 LINE L1 3703 4058 -2088 33485 48 3 1 chr5 168196192 168200361 -31429789 + L1P LINE L1 1059 5233 -913 7410 48 1 2 chr5 168200463 168201672 -31428478 + L1PA3 LINE L1 4943 6152 -3 27 62 0 0 chr5 168201672 168201720 -31428430 + AT_rich Low_complexity Low_complexity 1 48 0 283 314 59 0 chr5 168202024 168202126 -31428024 - MIR3 SINE MIR -2 206 99 587 178 19 0 chr5 168202304 168202411 -31427739 + L1PA10 LINE L1 6055 6163 -5 2138 113 3 10 chr5 168202426 168202727 -31427423 + AluSp SINE Alu 9 307 -6 270 295 83 13 chr5 168202767 168202923 -31427227 - L1ME4a LINE L1 -213 5908 5742 1694 161 4 0 chr5 168202968 168203222 -31426928 - AluSx SINE Alu -55 257 3 200 35 35 0 chr5 168203226 168203255 -31426895 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 8582 101 10 2 chr5 168203255 168205239 -31424911 - L1PA7 LINE L1 -16 6138 4141 12950 113 2 5 chr5 168205239 168207152 -31422998 + L1P LINE L1 2382 4289 -1857 7323 39 7 0 chr5 168207260 168208135 -31422015 + L1PA4 LINE L1 5268 6148 -7 540 256 88 47 chr5 168209696 168210036 -31420114 + L1M4 LINE L1 3705 4058 -2088 290 206 0 43 chr5 168211292 168211384 -31418766 - AluY SINE Alu 0 301 214 1630 176 33 27 chr5 168211522 168211857 -31418293 - MER1B DNA MER1_type 0 337 1 357 177 0 0 chr5 168212316 168212395 -31417755 + (TA)n Simple_repeat Simple_repeat 2 80 0 1494 199 11 28 chr5 168212397 168212683 -31417467 - AluJo SINE Alu -31 281 1 337 212 237 30 chr5 168212695 168212893 -31417257 - L1MC5 LINE L1 -447 7514 7276 740 254 57 20 chr5 168212983 168213307 -31416843 - L1MC4a LINE L1 -632 7233 6923 347 157 83 66 chr5 168213390 168213511 -31416639 - L2 LINE L2 -1295 2019 1897 198 0 0 0 chr5 168213530 168213552 -31416598 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1547 119 9 0 chr5 168213573 168213783 -31416367 - AluSg/x SINE Alu -2 310 99 455 312 74 27 chr5 168215252 168215589 -31414561 + L1M4 LINE L1 3704 4056 -2090 2431 43 11 0 chr5 168216799 168217105 -31413045 + AluY SINE Alu 1 309 0 680 219 15 0 chr5 168217105 168217242 -31412908 - L1M3 LINE L1 -476 5707 5569 562 122 10 10 chr5 168218364 168218468 -31411682 + L1PA12 LINE L1 5888 5995 -172 228 284 0 27 chr5 168218643 168218717 -31411433 + L2 LINE L2 3195 3266 -47 307 224 86 43 chr5 168218761 168218877 -31411273 - MIR SINE MIR -61 201 81 323 242 61 61 chr5 168220355 168220553 -31409597 + MIR SINE MIR 65 262 0 357 296 138 5 chr5 168221468 168221671 -31408479 + MIR SINE MIR 33 262 0 402 21 0 0 chr5 168222695 168222742 -31407408 + (TG)n Simple_repeat Simple_repeat 2 48 0 832 97 7 90 chr5 168223774 168223898 -31406252 + AluSg/x SINE Alu 157 269 -41 2252 60 39 3 chr5 168223898 168224183 -31405967 + AluY SINE Alu 1 295 -16 832 97 7 90 chr5 168224183 168224203 -31405947 + AluSg/x SINE Alu 269 289 -21 2138 179 66 12 chr5 168224208 168224692 -31405458 + MER4B LTR ERV1 94 768 -11 465 19 0 0 chr5 168225352 168225406 -31404744 + (TG)n Simple_repeat Simple_repeat 2 55 0 237 159 0 0 chr5 168225831 168225875 -31404275 + GA-rich Low_complexity Low_complexity 2 45 0 274 32 0 0 chr5 168227428 168227459 -31402691 - AluY SINE Alu -256 44 14 1636 102 18 4 chr5 168227459 168227684 -31402466 + AluSg/x SINE Alu 68 295 -17 1914 198 81 18 chr5 168227786 168228230 -31401920 - MER70A LTR ERVL 0 472 1 578 154 31 33 chr5 168228248 168228414 -31401736 + L1M1 LINE L1 5335 5494 -680 462 349 18 22 chr5 168228376 168228648 -31401502 - L1ME LINE L1 -429 5733 5463 * 643 242 0 8 chr5 168228664 168228792 -31401358 - LTR57-int LTR ERVL -5209 134 8 2490 53 0 10 chr5 168228916 168229217 -31400933 - AluY SINE Alu -13 298 1 3991 159 17 44 chr5 168229217 168230032 -31400118 + LTR57-int LTR ERVL 573 1365 -3978 674 197 20 7 chr5 168230179 168230326 -31399824 + FRAM SINE Alu 22 170 -6 423 248 48 58 chr5 168230352 168230558 -31399592 + LTR33 LTR ERVL 299 502 -19 2160 99 48 0 chr5 168230959 168231251 -31398899 - AluSx SINE Alu -6 306 1 1884 133 8 0 chr5 168231309 168231573 -31398577 + AluSx SINE Alu 8 273 -39 386 132 9 123 chr5 168231622 168231728 -31398422 - L1MC4 LINE L1 -197 7845 7752 31 58 0 0 chr5 168232751 168232803 -31397347 + AT_rich Low_complexity Low_complexity 1 52 0 184 67 0 67 chr5 168233011 168233056 -31397094 + (CAAAAA)n Simple_repeat Simple_repeat 6 47 0 2046 83 22 32 chr5 168233438 168233716 -31396434 + AluSq SINE Alu 37 311 -2 1957 110 27 7 chr5 168235297 168235589 -31394561 + AluSx SINE Alu 1 298 -14 1556 157 33 30 chr5 168235728 168236147 -31394003 - AluJo SINE Alu 0 426 7 580 184 32 0 chr5 168236983 168237108 -31393042 + AluJo SINE Alu 109 237 -75 1572 168 3 27 chr5 168237563 168237860 -31392290 + AluJo SINE Alu 15 304 -8 296 226 29 66 chr5 168237903 168238040 -31392110 - MER104 DNA Tc2 -44 136 5 606 121 22 0 chr5 168238158 168238249 -31391901 - AluSc SINE Alu -215 94 2 187 270 40 27 chr5 168238257 168238331 -31391819 - L3 LINE CR1 -193 1384 1310 396 97 0 0 chr5 168238843 168238905 -31391245 + (TG)n Simple_repeat Simple_repeat 2 63 0 24 77 0 0 chr5 168239546 168239598 -31390552 + AT_rich Low_complexity Low_complexity 1 52 0 323 103 0 17 chr5 168239654 168239712 -31390438 + (TAAA)n Simple_repeat Simple_repeat 1 57 0 207 218 26 58 chr5 168239848 168240004 -31390146 + (TATATG)n Simple_repeat Simple_repeat 3 153 0 231 244 244 0 chr5 168241181 168241263 -31388887 + MIR SINE MIR 49 150 -112 808 258 118 53 chr5 168241336 168241457 -31388693 + LTR16C LTR ERVL 89 201 -290 2068 116 4 4 chr5 168241457 168241734 -31388416 - AluSq SINE Alu -36 277 1 808 258 118 53 chr5 168241734 168241969 -31388181 + LTR16C LTR ERVL 201 468 -23 379 266 64 9 chr5 168242044 168242153 -31387997 + L2 LINE L2 3199 3313 0 31879 62 2 0 chr5 168242768 168246801 -31383349 + L1P LINE L1 1 4041 -2105 29 60 0 0 chr5 168247130 168247180 -31382970 + AT_rich Low_complexity Low_complexity 1 50 0 939 156 134 6 chr5 168247760 168247939 -31382211 + AluSq SINE Alu 67 268 -45 396 291 33 46 chr5 168248042 168248193 -31381957 + LTR33 LTR ERVL 17 165 -356 372 22 0 0 chr5 168248879 168248924 -31381226 + (CA)n Simple_repeat Simple_repeat 2 46 0 2659 161 66 23 chr5 168249588 168250167 -31379983 - MER4B LTR ERV1 -11 768 1 2284 75 0 3 chr5 168250629 168250911 -31379239 - AluY SINE Alu -30 281 1 1992 103 41 0 chr5 168250911 168251182 -31378968 - AluSq SINE Alu -8 305 24 2637 59 0 0 chr5 168251584 168251887 -31378263 - AluY SINE Alu -8 303 1 1448 191 7 7 chr5 168252470 168252747 -31377403 - AluJb SINE Alu -31 281 5 296 24 0 24 chr5 168252901 168252943 -31377207 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 196 151 19 19 chr5 168252986 168253039 -31377111 + CT-rich Low_complexity Low_complexity 3 55 0 182 88 0 29 chr5 168253635 168253669 -31376481 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2770 109 53 17 chr5 168304778 168305191 -31324959 - MSTC LTR MaLR 0 428 1 2874 10 0 0 chr5 168305218 168305527 -31324623 - AluYa5 SINE Alu -2 309 1 196 58 101 14 chr5 168305665 168305734 -31324416 + (TA)n Simple_repeat Simple_repeat 2 76 0 24 67 0 0 chr5 168305738 168305783 -31324367 + AT_rich Low_complexity Low_complexity 1 45 0 489 58 0 0 chr5 168306117 168306186 -31323964 + (GA)n Simple_repeat Simple_repeat 1 69 0 247 122 102 0 chr5 168306445 168306494 -31323656 + MIR SINE MIR 112 165 -97 481 254 105 92 chr5 168306849 168307164 -31322986 + L2 LINE L2 2995 3313 0 190 256 0 0 chr5 168308253 168308292 -31321858 + MIR SINE MIR 29 67 -141 196 217 43 14 chr5 168308414 168308483 -31321667 - MIR SINE MIR -7 255 185 26 0 0 0 chr5 168308538 168308564 -31321586 + AT_rich Low_complexity Low_complexity 1 26 0 242 377 131 29 chr5 168308570 168308745 -31321405 + L2 LINE L2 3063 3255 -17 421 191 71 71 chr5 168308767 168308893 -31321257 + L2 LINE L2 3188 3313 0 413 273 47 7 chr5 168310115 168310265 -31319885 - MIR SINE MIR -9 253 98 269 253 120 0 chr5 168310374 168310449 -31319701 + L2 LINE L2 3210 3293 -20 434 292 29 7 chr5 168310933 168311070 -31319080 - MIR SINE MIR -2 260 121 3668 60 0 7 chr5 168311267 168311718 -31318432 - LTR7 LTR ERV1 -2 448 1 2561 88 45 3 chr5 168311718 168312094 -31318056 - HERVH LTR ERV1 0 7713 7322 507 80 13 0 chr5 168312210 168312285 -31317865 - HERVH LTR ERV1 -2026 5687 5612 4409 146 1 1 chr5 168312307 168312967 -31317183 - HERVH LTR ERV1 -2564 5149 4490 3415 115 0 4 chr5 168312971 168313467 -31316683 - HERVH LTR ERV1 -3720 3993 3500 875 155 20 0 chr5 168313466 168313614 -31316536 - HERVH LTR ERV1 -4423 3290 3140 * 20176 98 26 6 chr5 168313608 168316536 -31313614 - HERVH LTR ERV1 -4726 2987 1 3670 64 0 7 chr5 168316551 168317002 -31313148 - LTR7 LTR ERV1 -2 448 1 223 290 0 58 chr5 168319121 168319190 -31310960 - MIR SINE MIR -122 86 22 577 215 52 5 chr5 168319258 168319428 -31310722 - MIR SINE MIR -55 207 33 200 317 32 49 chr5 168319507 168319630 -31310520 - MIR SINE MIR -95 167 47 387 218 203 15 chr5 168319899 168320032 -31310118 - MIR3 SINE MIR -48 160 3 216 346 25 0 chr5 168320533 168320614 -31309536 + MIR SINE MIR 33 115 -93 487 320 113 33 chr5 168320785 168321147 -31309003 + L2 LINE L2 2824 3214 -58 371 214 4 83 chr5 168321149 168321313 -31308837 + L1ME1 LINE L1 5860 5999 -167 798 187 27 0 chr5 168321317 168321467 -31308683 + L1MA10 LINE L1 6169 6322 -12 199 367 0 0 chr5 168323212 168323272 -31306878 - L2 LINE L2 -76 3196 3137 351 329 52 87 chr5 168323402 168323906 -31306244 + L2 LINE L2 2406 2891 -423 430 252 122 8 chr5 168324078 168324201 -31305949 + L2 LINE L2 3175 3311 -2 654 249 104 72 chr5 168324483 168324869 -31305281 - MLT1I LTR MaLR -2 407 10 2025 128 14 0 chr5 168324903 168325199 -31304951 - AluSx SINE Alu -10 302 3 3353 112 94 0 chr5 168325210 168325711 -31304439 - MER41B LTR ERV1 -87 548 1 9167 110 18 27 chr5 168325718 168327200 -31302950 - MER41B-int LTR ERV1 -5 5941 4596 476 269 79 53 chr5 168327342 168327455 -31302695 + L2 LINE L2 707 816 -2498 1856 138 30 16 chr5 168327455 168327759 -31302391 - AluSx SINE Alu -4 308 1 476 269 79 53 chr5 168327759 168327872 -31302278 + L2 LINE L2 816 939 -2375 2121 150 0 0 chr5 168327881 168328187 -31301963 - AluSx SINE Alu -6 306 1 1012 151 73 22 chr5 168328220 168328399 -31301751 - MER21B LTR ERV1 -369 494 307 3887 275 159 32 chr5 168328399 168330503 -31299647 + L2 LINE L2 960 3313 0 555 335 6 11 chr5 168330564 168330740 -31299410 + MIR3 SINE MIR 10 184 -24 1090 307 47 66 chr5 168330891 168331703 -31298447 + L2 LINE L2 2508 3313 0 555 335 6 11 chr5 168331764 168331940 -31298210 + MIR3 SINE MIR 10 184 -24 339 25 0 0 chr5 168332687 168332727 -31297423 + (TC)n Simple_repeat Simple_repeat 1 40 0 380 318 118 57 chr5 168332946 168333295 -31296855 + L2 LINE L2 2921 3290 -23 390 260 31 0 chr5 168333317 168333413 -31296737 + MIR SINE MIR 161 259 -3 215 267 53 13 chr5 168333703 168333778 -31296372 + L2 LINE L2 1329 1406 -1908 2438 83 0 0 chr5 168333901 168334203 -31295947 - L1PA7 LINE L1 -7 6147 5846 513 47 0 0 chr5 168334255 168334319 -31295831 + (TG)n Simple_repeat Simple_repeat 1 64 0 202 211 0 0 chr5 168334341 168334379 -31295771 + CT-rich Low_complexity Low_complexity 1 38 0 654 211 91 29 chr5 168334396 168334638 -31295512 - L1MC5 LINE L1 -53 7908 7652 16549 165 9 7 chr5 168334638 168336985 -31293165 - L1P LINE L1 -1935 4211 1857 2134 107 0 7 chr5 168336985 168337373 -31292777 - AluSc SINE Alu 0 386 1 16549 165 9 7 chr5 168337373 168337943 -31292207 - L1P LINE L1 -4289 1857 1289 21 0 0 0 chr5 168338002 168338023 -31292127 + AT_rich Low_complexity Low_complexity 1 21 0 387 167 26 13 chr5 168338092 168338170 -31291980 - L1MC5 LINE L1 -491 7470 7392 236 231 19 0 chr5 168338607 168338659 -31291491 - L2 LINE L2 -1 3271 3219 440 275 101 108 chr5 168338834 168339260 -31290890 + L2 LINE L2 2850 3272 0 226 323 133 57 chr5 168339266 168339762 -31290388 + L2 LINE L2 1861 2394 -920 303 288 30 38 chr5 168340196 168340328 -31289822 + HAL1 LINE L1 2016 2146 -361 190 259 0 19 chr5 168340492 168340546 -31289604 + L2 LINE L2 2691 2743 -571 1240 118 15 20 chr5 168340621 168340816 -31289334 - MER20 DNA MER1_type -2 217 24 327 25 0 0 chr5 168340854 168340894 -31289256 + (CA)n Simple_repeat Simple_repeat 2 41 0 668 283 124 9 chr5 168341281 168341514 -31288636 - MIR SINE MIR 0 262 3 780 274 47 21 chr5 168342020 168342254 -31287896 - MIR SINE MIR -5 257 18 361 300 64 28 chr5 168344891 168345088 -31285062 + MIR SINE MIR 27 233 -29 192 263 0 0 chr5 168345157 168345195 -31284955 + MIR SINE MIR 194 231 -31 459 268 52 20 chr5 168345962 168346115 -31284035 + MIR3 SINE MIR 44 201 -7 804 256 37 29 chr5 168346670 168346916 -31283234 + MIR SINE MIR 1 248 -14 787 288 203 21 chr5 168347145 168347923 -31282227 - L2 LINE L2 0 3313 2358 342 300 36 29 chr5 168348161 168348301 -31281849 - MIR SINE MIR -55 207 67 24 67 0 0 chr5 168348807 168348852 -31281298 + AT_rich Low_complexity Low_complexity 1 45 0 380 271 99 52 chr5 168348977 168349169 -31280981 - MIR3 SINE MIR -6 202 2 345 294 64 43 chr5 168349170 168349357 -31280793 - MIR3 SINE MIR -5 203 13 204 125 0 0 chr5 168349423 168349455 -31280695 + (TA)n Simple_repeat Simple_repeat 2 33 0 517 253 27 77 chr5 168349455 168349676 -31280474 + MER102b DNA MER1_type 132 341 0 1063 233 14 18 chr5 168350076 168350295 -31279855 - MER20 DNA MER1_type -1 218 1 259 286 83 101 chr5 168350604 168351048 -31279102 + L2 LINE L2 2832 3267 -5 221 209 0 0 chr5 168351533 168351576 -31278574 - L3 LINE CR1 -5 1572 1530 383 311 124 13 chr5 168351656 168351881 -31278269 + MIR SINE MIR 5 254 -8 225 306 124 8 chr5 168352262 168352383 -31277767 + MIR SINE MIR 73 207 -55 180 179 0 0 chr5 168353325 168353364 -31276786 + GA-rich Low_complexity Low_complexity 1 39 0 214 184 0 20 chr5 168353521 168353570 -31276580 + GA-rich Low_complexity Low_complexity 1 48 0 217 261 14 14 chr5 168354107 168354176 -31275974 + (TATG)n Simple_repeat Simple_repeat 3 71 0 21 0 0 0 chr5 168355497 168355518 -31274632 + AT_rich Low_complexity Low_complexity 1 21 0 186 286 20 0 chr5 168357945 168357994 -31272156 - MIR SINE MIR -12 250 201 673 273 29 16 chr5 168358018 168358227 -31271923 - MIR SINE MIR -12 250 41 245 324 108 0 chr5 168359164 168359238 -31270912 - L2 LINE L2 -48 3224 3143 548 301 0 0 chr5 168360204 168360327 -31269823 - L2 LINE L2 0 3272 3150 205 363 44 26 chr5 168360329 168360442 -31269708 + MER5B DNA MER1_type 1 115 -63 305 281 136 63 chr5 168360858 168361079 -31269071 + MER102b DNA MER1_type 105 341 0 485 280 25 25 chr5 168361476 168361633 -31268517 + Charlie8 DNA MER1_type 118 274 -2143 309 343 139 10 chr5 168361871 168362072 -31268078 - MIR SINE MIR -4 258 32 2364 107 0 3 chr5 168362110 168362420 -31267730 + AluSc SINE Alu 1 309 0 310 294 22 11 chr5 168363107 168363199 -31266951 - MER117 DNA MER1_type -21 176 84 297 75 0 0 chr5 168363347 168363387 -31266763 + (TC)n Simple_repeat Simple_repeat 2 41 0 330 26 0 0 chr5 168363388 168363427 -31266723 + (CA)n Simple_repeat Simple_repeat 2 40 0 216 335 123 34 chr5 168363585 168363764 -31266386 + MIR3 SINE MIR 2 196 -12 264 281 250 25 chr5 168363955 168364115 -31266035 - L2 LINE L2 0 3313 3118 327 245 39 29 chr5 168364263 168364365 -31265785 - L2 LINE L2 -510 2804 2702 425 244 25 0 chr5 168365809 168365928 -31264222 - L1ME LINE L1 -299 5822 5701 201 256 128 0 chr5 168366069 168366155 -31263995 + MIR SINE MIR 64 160 -102 917 261 51 78 chr5 168366557 168367087 -31263063 - MLT1K LTR MaLR -6 582 17 187 189 14 14 chr5 168367090 168367164 -31262986 + (TA)n Simple_repeat Simple_repeat 2 75 0 334 243 22 24 chr5 168368324 168368435 -31261715 + MLT1G LTR MaLR 434 578 -2 543 306 75 18 chr5 168368448 168368726 -31261424 - L2 LINE L2 -36 3277 2984 432 0 0 0 chr5 168369087 168369135 -31261015 + (TG)n Simple_repeat Simple_repeat 2 49 0 205 286 16 16 chr5 168369149 168369212 -31260938 + L3 LINE CR1 1502 1564 -13 1981 144 3 3 chr5 168369619 168369925 -31260225 + AluSx SINE Alu 5 310 -2 181 294 115 71 chr5 168370236 168370729 -31259421 + L2 LINE L2 2440 2956 -316 474 254 184 33 chr5 168370745 168370989 -31259161 - L2 LINE L2 -23 3290 3010 934 213 5 15 chr5 168370998 168371195 -31258955 + MER3 DNA MER1_type 13 207 -2 281 156 0 109 chr5 168371154 168371218 -31258932 - MER3 DNA MER1_type -119 90 34 * 383 316 228 0 chr5 168371223 168371460 -31258690 - L2 LINE L2 -353 2961 2671 266 171 200 0 chr5 168371492 168371562 -31258588 - MLT1I LTR MaLR 0 409 326 305 278 110 22 chr5 168371778 168371919 -31258231 - MLT1H LTR MaLR -238 174 50 334 331 47 6 chr5 168371950 168372119 -31258031 - L2 LINE L2 -671 2643 2468 578 300 135 0 chr5 168372380 168372610 -31257540 + MIR SINE MIR 2 262 0 26 0 0 0 chr5 168372899 168372925 -31257225 + AT_rich Low_complexity Low_complexity 1 26 0 407 254 63 7 chr5 168373724 168373866 -31256284 + MER103 DNA DNA 2 151 -15 262 350 112 11 chr5 168375103 168375363 -31254787 + L3 LINE CR1 1137 1422 -155 900 217 137 77 chr5 168375572 168375922 -31254228 + MLT1A2 LTR MaLR 3 373 -1 310 333 29 9 chr5 168376325 168376430 -31253720 + MIR SINE MIR 23 129 -79 369 363 26 31 chr5 168376499 168376725 -31253425 + MIR SINE MIR 12 236 -26 3169 169 9 2 chr5 168376990 168377529 -31252621 - L1 LINE L1 -1022 5124 4582 * 5312 158 23 26 chr5 168377527 168378528 -31251622 + L1MA7 LINE L1 5293 6290 -1 2241 116 0 0 chr5 168378710 168379011 -31251139 + AluY SINE Alu 1 301 -10 200 285 64 81 chr5 168379147 168379319 -31250831 - MIR SINE MIR -44 218 50 180 288 50 50 chr5 168379295 168379375 -31250775 + MIR SINE MIR 39 118 -90 * 862 272 120 68 chr5 168380380 168381187 -31248963 + L2 LINE L2 2455 3307 -6 241 337 43 0 chr5 168381227 168381319 -31248831 - L2 LINE L2 -40 3232 3137 511 235 49 91 chr5 168381429 168381672 -31248478 - MIR SINE MIR -18 244 12 855 187 10 84 chr5 168381675 168381753 -31248397 + MER5A DNA MER1_type 1 83 -106 2182 96 10 3 chr5 168381753 168382055 -31248095 + AluY SINE Alu 1 304 -7 855 187 10 84 chr5 168382055 168382179 -31247971 + MER5A DNA MER1_type 83 188 -1 196 333 0 101 chr5 168383377 168383506 -31246644 + MIR SINE MIR 30 145 -63 392 301 124 26 chr5 168383590 168383816 -31246334 - MIR SINE MIR -3 259 12 23 33 0 0 chr5 168384662 168384692 -31245458 + AT_rich Low_complexity Low_complexity 1 30 0 633 253 170 6 chr5 168384872 168385054 -31245096 + MIR SINE MIR 14 225 -37 210 311 0 0 chr5 168385087 168385148 -31245002 - MIR SINE MIR -75 187 127 1073 256 56 47 chr5 168385228 168385587 -31244563 - MLT1I LTR MaLR 0 409 48 229 326 10 0 chr5 168385607 168385705 -31244445 + MIR SINE MIR 160 258 -4 288 0 0 0 chr5 168385787 168385819 -31244331 + (TC)n Simple_repeat Simple_repeat 1 32 0 297 371 36 18 chr5 168386325 168386492 -31243658 + MIR SINE MIR 20 189 -73 426 228 0 11 chr5 168386526 168386618 -31243532 + L2 LINE L2 3223 3313 0 2006 118 0 10 chr5 168386819 168387116 -31243034 + AluSc SINE Alu 1 294 -15 1186 179 18 49 chr5 168387964 168388187 -31241963 + MER20 DNA MER1_type 1 216 -3 413 34 34 0 chr5 168388221 168388280 -31241870 + L1MA2 LINE L1 6244 6304 0 251 175 0 35 chr5 168388863 168388920 -31241230 + MIR SINE MIR 99 153 -109 198 290 212 31 chr5 168389430 168389623 -31240527 - MIR SINE MIR -22 240 13 * 538 253 83 23 chr5 168389550 168389781 -31240369 + MIR SINE MIR 5 243 -19 6737 156 35 31 chr5 168389898 168391139 -31239011 + Ricksha_b DNA DNA 8 1254 0 1185 149 22 0 chr5 168391222 168391403 -31238747 - MER5A DNA MER1_type -4 185 1 218 194 0 113 chr5 168392658 168392720 -31237430 + MIR SINE MIR 81 135 -73 646 304 80 0 chr5 168392846 168393070 -31237080 - MIR SINE MIR -19 243 2 680 374 28 26 chr5 168393620 168394080 -31236070 - L2 LINE L2 -8 3264 2804 206 279 47 35 chr5 168394200 168394286 -31235864 + L2 LINE L2 3162 3248 -24 357 259 130 0 chr5 168394357 168394465 -31235685 + L3 LINE CR1 1370 1491 -86 377 333 79 23 chr5 168394545 168394722 -31235428 - MIR SINE MIR -13 249 63 262 239 104 0 chr5 168395200 168395267 -31234883 + L2 LINE L2 3240 3313 0 324 300 185 35 chr5 168395537 168395627 -31234523 + MIR SINE MIR 29 104 -158 185 0 40 0 chr5 168395627 168395652 -31234498 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 324 300 185 35 chr5 168395652 168395761 -31234389 + MIR SINE MIR 104 258 -4 192 289 0 0 chr5 168395906 168395951 -31234199 + L3 LINE CR1 1530 1574 -3 430 281 88 47 chr5 168396571 168396763 -31233387 - MIR SINE MIR -33 229 30 214 364 40 10 chr5 168397396 168397495 -31232655 + MIR SINE MIR 1 102 -160 1899 151 14 0 chr5 168397681 168397999 -31232151 - AluSx SINE Alu 0 322 1 239 292 56 45 chr5 168398649 168398827 -31231323 + L2 LINE L2 2562 2741 -573 199 234 16 47 chr5 168399314 168399378 -31230772 + L2 LINE L2 3207 3268 -4 501 296 53 13 chr5 168399660 168399812 -31230338 + MIR SINE MIR 14 171 -91 326 179 15 0 chr5 168401045 168401112 -31229038 - L1MB8 LINE L1 -1 6177 6110 786 209 171 23 chr5 168401864 168402256 -31227894 + MER113 DNA MER1_type? 1 450 -71 291 325 122 0 chr5 168402286 168402409 -31227741 + MIR3 SINE MIR 47 184 -24 245 302 17 60 chr5 168402413 168402529 -31227621 + MER5A DNA MER1_type 7 117 -72 763 326 147 5 chr5 168403330 168403790 -31226360 - L2 LINE L2 0 3313 2790 268 314 83 8 chr5 168404141 168404262 -31225888 - MIR SINE MIR -8 254 125 2301 117 0 0 chr5 168404427 168404736 -31225414 + AluSc SINE Alu 1 309 0 199 304 14 14 chr5 168405438 168405507 -31224643 + MIR SINE MIR 55 123 -85 196 328 26 115 chr5 168405474 168405666 -31224484 + L2 LINE L2 2985 3159 -113 * 224 287 35 46 chr5 168405668 168405755 -31224395 + MIR SINE MIR 3 88 -174 185 328 0 31 chr5 168405842 168405906 -31224244 + L2 LINE L2 3221 3282 -31 197 146 21 0 chr5 168405911 168405959 -31224191 + (ATGGTG)n Simple_repeat Simple_repeat 5 53 0 180 200 0 0 chr5 168406029 168406069 -31224081 + (TGG)n Simple_repeat Simple_repeat 1 40 0 423 314 57 38 chr5 168406092 168406302 -31223848 - MIR SINE MIR -3 259 46 183 222 0 0 chr5 168406355 168406400 -31223750 + GA-rich Low_complexity Low_complexity 4 48 0 748 236 173 42 chr5 168406562 168406875 -31223275 - L2 LINE L2 0 3313 2960 207 317 10 58 chr5 168407684 168407788 -31222362 + MIR SINE MIR 38 137 -71 759 175 0 0 chr5 168408409 168408523 -31221627 - MER58A DNA MER1_type 0 224 111 483 212 71 0 chr5 168408576 168408675 -31221475 - MER58A DNA MER1_type -1 106 1 422 315 81 15 chr5 168409309 168409506 -31220644 - MIR SINE MIR -38 224 15 274 258 21 75 chr5 168409670 168409763 -31220387 + L2 LINE L2 3190 3277 -36 1617 99 45 5 chr5 168409845 168410066 -31220084 - MER30 DNA MER1_type 0 230 1 192 314 0 0 chr5 168410148 168410199 -31219951 + L2 LINE L2 3253 3303 -10 314 333 156 4 chr5 168410504 168410729 -31219421 + L3 LINE CR1 1296 1554 -23 261 242 53 63 chr5 168411199 168411294 -31218856 - MIR SINE MIR -65 143 50 479 281 115 17 chr5 168411433 168411782 -31218368 - L1ME4a LINE L1 -5 6116 5734 417 328 48 32 chr5 168412719 168412908 -31217242 + MIR SINE MIR 56 247 -15 279 212 142 53 chr5 168413432 168413545 -31216605 + MIR SINE MIR 75 197 -65 873 183 0 81 chr5 168413549 168413658 -31216492 - MER5A DNA MER1_type -18 171 82 571 0 0 110 chr5 168413658 168413740 -31216410 - L1PA3 LINE L1 -1 6154 6082 873 183 0 81 chr5 168413740 168413816 -31216334 - MER5A DNA MER1_type -107 82 1 428 299 102 96 chr5 168414866 168415201 -31214949 + MER102b DNA MER1_type 1 337 -4 471 241 102 48 chr5 168415267 168415433 -31214717 + MER5B DNA MER1_type 1 175 -3 250 214 36 0 chr5 168415452 168415508 -31214642 - MER5A DNA MER1_type -8 181 124 211 108 27 27 chr5 168415475 168415512 -31214638 + MER5A DNA MER1_type 43 79 -110 * 182 277 200 0 chr5 168415510 168415575 -31214575 - MER5A DNA MER1_type -101 88 11 * 808 184 0 0 chr5 168415717 168415842 -31214308 - FLAM_C SINE Alu -18 125 1 4428 151 27 7 chr5 168416021 168416730 -31213420 - MER50 LTR ERV1 -11 723 1 213 273 64 27 chr5 168417151 168417261 -31212889 + MER5A DNA MER1_type 26 139 -50 2236 108 3 0 chr5 168417275 168417571 -31212579 - AluSq SINE Alu -16 297 1 285 98 0 0 chr5 168418836 168418877 -31211273 + (CA)n Simple_repeat Simple_repeat 1 41 0 4441 203 26 3 chr5 168419838 168420912 -31209238 + L1P4 LINE L1 4381 5479 -686 227 356 62 14 chr5 168421091 168421237 -31208913 - MIR SINE MIR -59 203 51 196 324 38 57 chr5 168421556 168421661 -31208489 + L2 LINE L2 3210 3312 -1 260 350 17 8 chr5 168421677 168421794 -31208356 + MIR3 SINE MIR 85 202 -6 6996 117 33 78 chr5 168421878 168422357 -31207793 - Tigger3b DNA MER2_type -1797 1231 732 718 229 83 6 chr5 168422357 168422514 -31207636 - FAM SINE Alu -6 169 1 6996 117 33 78 chr5 168422514 168423321 -31206829 - Tigger3b DNA MER2_type -2296 732 2 2282 214 23 15 chr5 168423322 168423849 -31206301 - L1ME1 LINE L1 -7 6159 5629 252 304 22 11 chr5 168423875 168423967 -31206183 + Charlie4 DNA MER1_type 1867 1959 -2 193 304 0 63 chr5 168424453 168424532 -31205618 + MIR SINE MIR 42 115 -93 1628 179 25 7 chr5 168424612 168424892 -31205258 - Tigger3(Golem) DNA MER2_type -2743 286 2 465 292 23 8 chr5 168425093 168425223 -31204927 - MIR SINE MIR -116 146 15 2330 116 52 3 chr5 168425484 168425828 -31204322 + THE1B LTR MaLR 1 361 -3 220 264 96 40 chr5 168426516 168426641 -31203509 - MIR SINE MIR -126 136 5 * 354 313 51 51 chr5 168426587 168426801 -31203349 + MIR SINE MIR 33 246 -16 273 98 0 0 chr5 168427763 168427804 -31202346 + (TGAG)n Simple_repeat Simple_repeat 3 43 0 2315 101 0 0 chr5 168427981 168428277 -31201873 + AluSc SINE Alu 1 296 -13 411 216 1 58 chr5 168429481 168429607 -31200543 - MLT1G3 LTR MaLR 0 582 461 447 262 255 0 chr5 168429609 168429750 -31200400 - MLT1G3 LTR MaLR -182 348 172 202 250 158 0 chr5 168430032 168430108 -31200042 - MIR SINE MIR -6 256 169 4866 170 14 51 chr5 168430512 168431389 -31198761 - L1MB8 LINE L1 0 6178 5270 2175 116 10 7 chr5 168431389 168431690 -31198460 - AluSq SINE Alu -11 302 1 4866 170 14 51 chr5 168431690 168431801 -31198349 - L1MB8 LINE L1 -908 5270 5236 2485 80 0 0 chr5 168431801 168432101 -31198049 - AluSq SINE Alu -13 300 1 4866 170 14 51 chr5 168432101 168432224 -31197926 - L1MB8 LINE L1 -942 5236 5110 594 274 83 15 chr5 168432240 168432444 -31197706 - L2 LINE L2 -1 3312 3095 747 163 35 159 chr5 168432498 168432725 -31197425 - MER20 DNA MER1_type -19 200 2 482 301 67 37 chr5 168432733 168433023 -31197127 - L2 LINE L2 -256 3057 2748 316 326 0 11 chr5 168433132 168433221 -31196929 - MIR3 SINE MIR -109 99 12 693 195 169 0 chr5 168433379 168433533 -31196617 + MER5A DNA MER1_type 10 189 0 270 312 124 77 chr5 168434005 168434303 -31195847 + L2 LINE L2 2946 3257 -15 403 269 30 17 chr5 168434868 168435030 -31195120 - MIR SINE MIR -55 153 47 254 215 43 75 chr5 168435312 168435405 -31194745 - MER113 DNA MER1_type? -102 419 330 676 267 50 0 chr5 168435734 168435914 -31194236 + MIR SINE MIR 72 260 -2 878 209 47 33 chr5 168436126 168436341 -31193809 - MER20 DNA MER1_type 0 219 2 1416 180 125 7 chr5 168436411 168436716 -31193434 - MER58B DNA MER1_type 0 341 1 383 273 20 0 chr5 168437553 168437652 -31192498 + MER117 DNA MER1_type 56 156 -41 425 319 5 43 chr5 168438373 168438558 -31191592 + MIR SINE MIR 79 256 -6 309 246 0 0 chr5 168438635 168438692 -31191458 + MIR SINE MIR 51 107 -101 324 328 38 15 chr5 168438723 168438854 -31191296 - L2 LINE L2 -1 3271 3138 253 394 19 19 chr5 168439149 168439304 -31190846 + MIR SINE MIR 8 162 -100 538 224 99 25 chr5 168439848 168440009 -31190141 + MIR3 SINE MIR 30 202 -6 267 31 0 0 chr5 168440274 168440306 -31189844 + (GA)n Simple_repeat Simple_repeat 2 33 0 211 349 35 0 chr5 168440648 168440734 -31189416 - MIR SINE MIR -70 138 50 303 354 8 23 chr5 168441117 168441247 -31188903 + MIR SINE MIR 33 160 -102 23 33 0 0 chr5 168441706 168441736 -31188414 + AT_rich Low_complexity Low_complexity 1 30 0 206 224 20 20 chr5 168441962 168441979 -31188171 + MIR SINE MIR 203 251 -11 219 125 0 0 chr5 168441979 168442011 -31188139 + L2 LINE L2 3265 3296 -17 1326 80 0 0 chr5 168442011 168442286 -31187864 + (TGGA)n Simple_repeat Simple_repeat 1 275 0 489 295 72 86 chr5 168442776 168442962 -31187188 - L2 LINE L2 0 3313 3126 2167 137 7 0 chr5 168442962 168443269 -31186881 + AluSx SINE Alu 3 311 -1 489 295 72 86 chr5 168443269 168443705 -31186445 - L2 LINE L2 -187 3126 2698 2175 95 0 3 chr5 168443718 168444024 -31186126 + AluSg SINE Alu 1 305 0 214 239 114 51 chr5 168444812 168444946 -31185204 - MIR SINE MIR -69 139 4 183 114 0 0 chr5 168444964 168444999 -31185151 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 613 266 114 78 chr5 168446348 168446832 -31183318 + L2 LINE L2 2697 3209 -104 2006 145 3 22 chr5 168446832 168447149 -31183001 - AluSx SINE Alu -1 311 1 613 266 114 78 chr5 168447149 168447258 -31182892 + L2 LINE L2 3209 3313 0 201 233 23 0 chr5 168447258 168447301 -31182849 - MIR SINE MIR -56 152 109 225 259 19 0 chr5 168447801 168447855 -31182295 - MER5A DNA MER1_type 0 189 135 1857 173 7 3 chr5 168447882 168448189 -31181961 - AluJo SINE Alu -4 308 1 813 186 0 0 chr5 168448189 168448322 -31181828 - AluJb SINE Alu -174 138 3 1681 221 23 30 chr5 168448346 168448775 -31181375 - MLT1C LTR MaLR 0 467 42 228 316 96 22 chr5 168448885 168449021 -31181129 - MIR3 SINE MIR -60 148 3 232 340 21 11 chr5 168449985 168450079 -31180071 - MIR3 SINE MIR -31 177 83 182 197 0 106 chr5 168450078 168450144 -31180006 - L2 LINE L2 0 3272 3214 * 201 304 18 0 chr5 168450168 168450224 -31179926 - MIR SINE MIR -3 259 203 290 291 104 52 chr5 168450353 168450391 -31179759 + L2 LINE L2 2812 2847 -425 2358 104 0 0 chr5 168450391 168450700 -31179450 - AluSx SINE Alu -3 309 1 290 291 104 52 chr5 168450700 168450891 -31179259 + L2 LINE L2 2847 3053 -219 730 218 0 45 chr5 168451074 168451230 -31178920 + MER63A DNA MER1_type 57 205 -5 541 304 12 12 chr5 168451239 168451407 -31178743 + L2 LINE L2 3142 3309 -4 743 264 11 16 chr5 168451425 168451607 -31178543 - MIR SINE MIR -77 185 5 186 356 17 0 chr5 168451615 168451674 -31178476 - L2 LINE L2 -88 3184 3125 2199 165 75 2 chr5 168452164 168452563 -31177587 + MSTA LTR MaLR 1 428 0 432 323 42 131 chr5 168452784 168453280 -31176870 - L2 LINE L2 0 3272 2821 301 350 142 9 chr5 168453604 168453830 -31176320 + MIR SINE MIR 5 260 -2 204 333 79 0 chr5 168454004 168454067 -31176083 + L2 LINE L2 3205 3272 0 297 0 0 0 chr5 168455597 168455630 -31174520 + (TG)n Simple_repeat Simple_repeat 2 34 0 470 345 24 12 chr5 168456579 168456744 -31173406 + L2 LINE L2 3105 3271 -1 455 270 32 8 chr5 168457432 168457558 -31172592 + MIR SINE MIR 23 151 -57 392 232 30 55 chr5 168457612 168457776 -31172374 - HAL1 LINE L1 -14 2493 2334 1208 204 52 73 chr5 168457776 168458061 -31172089 - MLT1A2 LTR MaLR 0 426 116 1856 172 0 3 chr5 168458061 168458357 -31171793 + AluSx SINE Alu 2 296 -16 1208 204 52 73 chr5 168458357 168458471 -31171679 - MLT1A2 LTR MaLR -310 116 1 254 172 35 0 chr5 168458472 168458530 -31171620 - HAL1 LINE L1 -191 2316 2257 1383 291 87 37 chr5 168458537 168459619 -31170531 - HAL1 LINE L1 -341 2166 989 422 293 115 56 chr5 168459806 168460274 -31169876 - HAL1 LINE L1 -1986 521 26 787 133 33 55 chr5 168460313 168460494 -31169656 - L1MC3 LINE L1 -1 7784 7608 278 313 0 0 chr5 168460517 168460597 -31169553 - MLT1F1 LTR MaLR -453 114 35 795 159 6 0 chr5 168460597 168460760 -31169390 - L1MC3 LINE L1 -688 7097 6934 282 21 42 21 chr5 168460811 168460859 -31169291 + (TATAA)n Simple_repeat Simple_repeat 2 50 0 377 276 107 28 chr5 168461494 168461695 -31168455 - MIR3 SINE MIR -50 212 8 532 297 104 27 chr5 168462485 168462707 -31167443 + MIR SINE MIR 18 256 -6 1653 205 0 17 chr5 168462803 168463101 -31167049 + AluJb SINE Alu 1 293 -19 2266 108 0 3 chr5 168463949 168464256 -31165894 - AluY SINE Alu -5 306 1 1140 182 5 0 chr5 168464472 168464681 -31165469 + MER2 DNA MER2_type 1 210 -135 333 219 31 0 chr5 168464709 168464773 -31165377 + MER2 DNA MER2_type 280 345 0 2521 62 0 3 chr5 168465183 168465492 -31164658 + AluY SINE Alu 1 308 -3 384 296 114 0 chr5 168466047 168466179 -31163971 + L3 LINE CR1 1389 1535 -42 520 347 86 0 chr5 168466184 168466406 -31163744 - MIR SINE MIR -3 259 19 213 305 17 0 chr5 168466915 168466974 -31163176 - L2 LINE L2 -4 3268 3209 3958 31 2 0 chr5 168467108 168467635 -31162515 + L1PA3 LINE L1 5643 6170 0 350 259 72 50 chr5 168467651 168467790 -31162360 - MIR3 SINE MIR -25 183 42 3900 31 0 2 chr5 168468097 168468576 -31161574 - L1PA3 LINE L1 -99 6056 5579 271 48 0 0 chr5 168468572 168468614 -31161536 + L1PA3 LINE L1 6114 6155 0 * 485 290 77 11 chr5 168468846 168469029 -31161121 + MIR SINE MIR 68 262 0 202 224 20 0 chr5 168469029 168469078 -31161072 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 247 169 17 17 chr5 168469463 168469522 -31160628 + Charlie8 DNA MER1_type 81 139 -2278 334 270 38 38 chr5 168469798 168469957 -31160193 + L1M4 LINE L1 5055 5213 -933 1769 105 0 0 chr5 168470049 168470277 -31159873 + AluSg/x SINE Alu 67 294 -16 1904 229 53 13 chr5 168470321 168470844 -31159306 - L1ME3A LINE L1 -254 5899 5356 2212 256 98 16 chr5 168470886 168471915 -31158235 - L1ME3A LINE L1 -860 5269 4157 309 295 48 18 chr5 168471931 168472097 -31158053 - L1ME3A LINE L1 -2385 3744 3574 261 0 0 0 chr5 168472118 168472147 -31158003 + (TA)n Simple_repeat Simple_repeat 2 30 0 956 101 0 0 chr5 168472147 168472286 -31157864 - L1P5 LINE L1 -369 5782 5644 247 262 98 42 chr5 168472373 168472587 -31157563 - L1ME3A LINE L1 -2947 3182 2957 327 347 58 41 chr5 168472591 168472885 -31157265 - L1ME3A LINE L1 -4227 2083 1785 436 323 66 18 chr5 168472908 168473676 -31156474 - L1ME3A LINE L1 -4579 1731 927 339 335 29 59 chr5 168473758 168473997 -31156153 - L1ME3A LINE L1 -5299 820 589 359 328 46 10 chr5 168474236 168474469 -31155681 - L1ME LINE L1 -5877 242 2 2447 81 7 0 chr5 168474629 168474937 -31155213 - AluY SINE Alu -1 310 1 955 276 13 17 chr5 168475664 168475903 -31154247 + MIR SINE MIR 11 248 -14 482 279 75 6 chr5 168476100 168476261 -31153889 - MER5B DNA MER1_type -6 172 1 247 191 0 0 chr5 168476297 168476344 -31153806 - MER63 DNA MER1_type -37 1023 977 334 235 176 0 chr5 168476344 168476429 -31153721 - MER63 DNA MER1_type -310 752 27 274 307 52 20 chr5 168476645 168476798 -31153352 + Charlie8 DNA MER1_type 1 158 -2259 394 320 8 16 chr5 168476994 168477119 -31153031 + MIR SINE MIR 29 152 -56 385 295 121 0 chr5 168477501 168477650 -31152500 + MIR SINE MIR 84 250 -12 260 213 0 33 chr5 168478618 168478679 -31151471 + CT-rich Low_complexity Low_complexity 3 61 0 506 91 39 0 chr5 168478688 168478765 -31151385 + MADE1 DNA Mariner 1 80 0 453 264 186 68 chr5 168479009 168479406 -31150744 + L2 LINE L2 2826 3269 -44 900 241 67 36 chr5 168479444 168479697 -31150453 - MIR SINE MIR -1 261 1 275 256 64 0 chr5 168480186 168480264 -31149886 + L2 LINE L2 3231 3313 0 1625 187 0 38 chr5 168480436 168480751 -31149399 + AluJo SINE Alu 1 303 -9 458 325 22 26 chr5 168480758 168480989 -31149161 - MIR SINE MIR -8 254 25 446 329 98 61 chr5 168481214 168481452 -31148698 + L2 LINE L2 2933 3188 -84 1435 96 64 14 chr5 168481452 168481671 -31148479 + MER30 DNA MER1_type 1 230 0 446 329 98 61 chr5 168481671 168481760 -31148390 + L2 LINE L2 3188 3272 0 431 255 143 6 chr5 168481910 168482071 -31148079 + MIR SINE MIR 76 258 -4 354 287 25 114 chr5 168484888 168485090 -31145060 + MIR3 SINE MIR 23 206 -2 190 303 34 22 chr5 168485919 168486008 -31144142 + MIR SINE MIR 52 141 -121 715 217 0 0 chr5 168486399 168486528 -31143622 + FLAM_C SINE Alu 4 132 -11 1099 155 5 26 chr5 168487131 168487324 -31142826 + MER5A DNA MER1_type 1 189 0 492 355 64 20 chr5 168487835 168488086 -31142064 - L2 LINE L2 -42 3230 2969 391 275 28 18 chr5 168488081 168488190 -31141960 - MIR SINE MIR -141 121 12 * 370 298 69 21 chr5 168488193 168488381 -31141769 + MER117 DNA MER1_type 1 197 0 337 242 111 65 chr5 168490312 168490465 -31139685 + MIR3 SINE MIR 33 192 -16 687 330 22 0 chr5 168490830 168491060 -31139090 - MIR SINE MIR -9 253 19 266 266 181 2 chr5 168491100 168491234 -31138916 + MIR SINE MIR 24 180 -65 513 32 0 0 chr5 168491505 168491568 -31138582 + (TG)n Simple_repeat Simple_repeat 2 64 0 459 220 83 30 chr5 168492291 168492423 -31137727 - MIR SINE MIR -35 227 89 366 284 191 9 chr5 168493394 168493609 -31136541 + MIR SINE MIR 9 262 0 309 298 95 48 chr5 168494037 168494205 -31135945 - MIR3 SINE MIR -10 198 23 473 295 119 26 chr5 168495062 168495289 -31134861 + MIR SINE MIR 3 250 -12 267 31 0 0 chr5 168495330 168495362 -31134788 + (CAT)n Simple_repeat Simple_repeat 2 33 0 224 310 48 93 chr5 168496951 168497390 -31132760 - L2 LINE L2 -365 2949 2531 251 247 88 100 chr5 168497506 168497676 -31132474 + MIR SINE MIR 37 204 -58 194 303 172 0 chr5 168497665 168497764 -31132386 - MIR SINE MIR -24 238 123 * 448 303 67 91 chr5 168497773 168498192 -31131958 - L2 LINE L2 -9 3263 2855 256 239 130 11 chr5 168498738 168498830 -31131320 - MIR3 SINE MIR -23 185 83 751 293 109 34 chr5 168498897 168499113 -31131037 - L2 LINE L2 0 3313 3115 2524 65 0 7 chr5 168499113 168499420 -31130730 + AluY SINE Alu 1 305 -6 751 293 109 34 chr5 168499420 168499670 -31130480 - L2 LINE L2 -198 3115 2812 1232 192 4 51 chr5 168501451 168501685 -31128465 + MER58A DNA MER1_type 2 224 0 785 268 80 17 chr5 168501685 168501924 -31128226 + MIR SINE MIR 9 262 0 666 310 60 9 chr5 168501979 168502211 -31127939 + MIR SINE MIR 7 250 -12 311 286 0 14 chr5 168503272 168503342 -31126808 + L2 LINE L2 3195 3263 -50 863 299 98 42 chr5 168504329 168504878 -31125272 + L2 LINE L2 2731 3313 0 211 318 30 0 chr5 168505005 168505071 -31125079 - MIR3 SINE MIR -48 160 93 259 282 103 86 chr5 168505787 168505904 -31124246 + L2 LINE L2 3146 3264 -8 479 312 39 76 chr5 168506682 168507092 -31123058 + L2 LINE L2 2878 3272 0 829 161 0 0 chr5 168507524 168507642 -31122508 + AluJo SINE Alu 1 118 -184 616 170 0 0 chr5 168507643 168507743 -31122407 + AluJo SINE Alu 211 310 -2 500 279 30 51 chr5 168508295 168508492 -31121658 - MIR3 SINE MIR -6 202 10 248 216 0 0 chr5 168508621 168508672 -31121478 + CT-rich Low_complexity Low_complexity 2 52 0 820 285 81 57 chr5 168509561 168510179 -31119971 - L2 LINE L2 0 3313 2671 286 323 23 15 chr5 168510292 168510425 -31119725 + L3 LINE CR1 1437 1570 -7 359 260 10 10 chr5 168510613 168510713 -31119437 + MER103 DNA DNA 65 164 -2 303 275 61 53 chr5 168511495 168511672 -31118478 + MIR SINE MIR 31 213 -49 222 220 14 28 chr5 168511794 168511935 -31118215 + (TGGA)n Simple_repeat Simple_repeat 3 141 0 531 243 40 143 chr5 168512504 168512755 -31117395 + MIR SINE MIR 20 244 -18 192 111 0 0 chr5 168512779 168512815 -31117335 + (CAT)n Simple_repeat Simple_repeat 2 37 0 740 206 129 0 chr5 168513534 168513704 -31116446 + MIR SINE MIR 64 255 -7 2129 174 44 60 chr5 168513902 168514403 -31115747 + MLT1D LTR MaLR 13 505 0 210 105 0 0 chr5 168514503 168514541 -31115609 + (TTAG)n Simple_repeat Simple_repeat 3 40 0 2175 101 0 14 chr5 168514541 168514828 -31115322 - AluSq SINE Alu -30 283 1 196 350 0 0 chr5 168514840 168514900 -31115250 - L2 LINE L2 -22 3291 3232 471 329 63 6 chr5 168514988 168515220 -31114930 - MIR SINE MIR -2 260 13 1888 126 0 86 chr5 168515838 168516163 -31113987 + AluSx SINE Alu 2 298 -14 238 310 17 0 chr5 168516213 168516271 -31113879 + MIR SINE MIR 18 76 -186 1032 231 16 33 chr5 168516910 168517152 -31112998 + MIR SINE MIR 2 239 -23 520 346 52 9 chr5 168517391 168517622 -31112528 - MIR SINE MIR -4 258 18 273 357 45 39 chr5 168517784 168517938 -31112212 - MIR3 SINE MIR -23 185 31 396 284 7 34 chr5 168518100 168518248 -31111902 + L2 LINE L2 3169 3312 -1 206 336 105 8 chr5 168518328 168518566 -31111584 - L2 LINE L2 -338 2976 2716 639 257 14 47 chr5 168518684 168518898 -31111252 + L2 LINE L2 3107 3313 0 395 315 49 38 chr5 168519088 168519272 -31110878 + L2 LINE L2 3123 3308 -5 321 241 0 13 chr5 168519333 168519412 -31110738 - MER116 DNA Mariner 0 80 3 424 275 43 7 chr5 168520135 168520273 -31109877 + MIR3 SINE MIR 41 183 -25 208 295 16 0 chr5 168520394 168520455 -31109695 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 433 266 99 54 chr5 168520600 168520822 -31109328 + MIR SINE MIR 31 262 0 28 29 0 0 chr5 168521447 168521482 -31108668 + AT_rich Low_complexity Low_complexity 1 35 0 3426 153 43 16 chr5 168521737 168522344 -31107806 - L1MB8 LINE L1 -1 6177 5555 331 284 82 37 chr5 168523040 168523174 -31106976 - MIR3 SINE MIR -21 187 48 302 61 20 0 chr5 168524019 168524068 -31106082 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 327 282 72 47 chr5 168524068 168524240 -31105910 + MIR SINE MIR 45 220 -42 211 297 0 16 chr5 168524296 168524360 -31105790 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 317 195 23 69 chr5 168525066 168525153 -31104997 - MIR SINE MIR -82 180 98 442 283 120 30 chr5 168525334 168525567 -31104583 - MIR SINE MIR -3 259 6 22 0 0 0 chr5 168525921 168525943 -31104207 + AT_rich Low_complexity Low_complexity 1 22 0 560 295 33 16 chr5 168526307 168526490 -31103660 + MIR SINE MIR 7 192 -70 362 299 37 0 chr5 168526603 168526710 -31103440 + L2 LINE L2 3133 3243 -29 294 29 0 0 chr5 168526724 168526759 -31103391 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 441 363 17 45 chr5 168526882 168527284 -31102866 - L3 LINE CR1 -21 1556 1166 351 346 38 32 chr5 168527652 168527837 -31102313 - MIR3 SINE MIR -20 188 3 216 0 0 0 chr5 168527884 168527908 -31102242 + (CAGAGA)n Simple_repeat Simple_repeat 1 24 0 694 211 78 6 chr5 168528492 168528638 -31101512 + MIR SINE MIR 41 198 -64 220 280 152 38 chr5 168528638 168528770 -31101380 + MIR SINE MIR 4 150 -112 2138 130 0 0 chr5 168578936 168579257 -31050893 - AluSq SINE Alu 0 321 1 1378 193 113 6 chr5 168579642 168579953 -31050197 + MER7A DNA MER2_type 4 345 -1 261 0 0 0 chr5 168580546 168580575 -31049575 + (A)n Simple_repeat Simple_repeat 1 29 0 331 329 133 0 chr5 168580757 168580900 -31049250 + MIR SINE MIR 3 164 -98 28 0 0 0 chr5 168580964 168580992 -31049158 + AT_rich Low_complexity Low_complexity 1 28 0 313 325 147 13 chr5 168581522 168581679 -31048471 + MIR3 SINE MIR 19 196 -12 221 413 37 0 chr5 168581746 168581855 -31048295 + L2 LINE L2 2970 3082 -190 2323 152 70 8 chr5 168581866 168582267 -31047883 + MSTB LTR MaLR 1 426 0 473 303 56 52 chr5 168582380 168582704 -31047446 + L1ME LINE L1 3 327 -5743 632 282 142 48 chr5 168582968 168583518 -31046632 - L2 LINE L2 -357 2957 2333 2238 64 0 0 chr5 168583518 168583783 -31046367 - AluY SINE Alu -12 299 35 632 282 142 48 chr5 168583783 168583895 -31046255 - L2 LINE L2 -981 2333 2233 185 119 24 0 chr5 168584052 168584094 -31046056 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 265 252 37 22 chr5 168585037 168585172 -31044978 + L1ME LINE L1 526 662 -5408 1820 211 11 108 chr5 168585199 168585763 -31044387 - MLT2B1 LTR ERVL -11 509 1 2296 291 62 15 chr5 168585774 168587602 -31042548 + L1ME LINE L1 723 2631 -3449 5363 142 33 10 chr5 168587610 168588572 -31041578 - L1MA6 LINE L1 -1 6299 5316 1490 107 0 0 chr5 168588588 168588812 -31041338 - L1PA13 LINE L1 0 6163 5940 1307 55 12 0 chr5 168588852 168589015 -31041135 - AluY SINE Alu -24 287 123 13528 149 14 15 chr5 168589015 168592016 -31038134 - L1PA13 LINE L1 -241 5922 2910 2081 140 35 88 chr5 168592016 168592433 -31037717 - MLT2A2 LTR ERVL 0 554 162 225 0 0 0 chr5 168592433 168592458 -31037692 + (TTA)n Simple_repeat Simple_repeat 1 25 0 2081 140 35 88 chr5 168592458 168592612 -31037538 - MLT2A2 LTR ERVL -392 162 1 643 200 32 0 chr5 168592612 168592737 -31037413 - L1PA13 LINE L1 -3232 2914 2786 * 1594 182 8 28 chr5 168592728 168593091 -31037059 - L1MA6 LINE L1 -1240 4906 4551 295 270 129 65 chr5 168593451 168593656 -31036494 + MIR SINE MIR 12 225 -37 554 313 45 30 chr5 168593823 168594024 -31036126 - L2 LINE L2 0 3272 3069 394 247 192 11 chr5 168594026 168594208 -31035942 + L1MEd LINE L1 2 216 -5903 356 234 175 35 chr5 168594311 168594599 -31035551 + L1MEd LINE L1 1018 1381 -4862 292 313 83 68 chr5 168594643 168594956 -31035194 - L2 LINE L2 -211 3061 2731 761 235 95 21 chr5 168595498 168595741 -31034409 - MIR SINE MIR 0 262 2 221 329 154 37 chr5 168598283 168598660 -31031490 - L2 LINE L2 -353 2961 2541 366 287 101 23 chr5 168599462 168599591 -31030559 - MER5A DNA MER1_type -6 183 45 333 338 7 35 chr5 168599748 168599893 -31030257 + MIR SINE MIR 13 153 -109 227 228 22 0 chr5 168600458 168600595 -31029555 + GA-rich Low_complexity Low_complexity 1 140 0 234 0 0 0 chr5 168600596 168600622 -31029528 + (TG)n Simple_repeat Simple_repeat 2 27 0 6953 201 26 21 chr5 168600889 168603383 -31026767 - L1 LINE L1 -3833 2495 1 1038 220 29 33 chr5 168603384 168603625 -31026525 + L1ME LINE L1 5398 5637 -527 2126 255 63 19 chr5 168603629 168604188 -31025962 + MLT1E LTR MaLR 6 593 0 705 219 61 6 chr5 168604189 168604374 -31025776 + L1ME LINE L1 5634 5826 -295 840 211 39 72 chr5 168604934 168605231 -31024919 + L1ME2 LINE L1 5808 6058 -106 239 274 137 0 chr5 168605355 168605457 -31024693 + MLT1I LTR MaLR 294 409 0 959 157 0 7 chr5 168605740 168605893 -31024257 + MLT1B LTR MaLR 239 390 0 1656 276 39 35 chr5 168605976 168606827 -31023323 - L2 LINE L2 -5 3308 2450 406 281 89 27 chr5 168607451 168607675 -31022475 + L2 LINE L2 3076 3313 0 435 304 6 36 chr5 168607859 168608027 -31022123 + MIR3 SINE MIR 39 201 -7 220 286 0 0 chr5 168608050 168608099 -31022051 - MIR3 SINE MIR -49 159 111 1452 204 123 49 chr5 168608718 168609188 -31020962 - MLT1D LTR MaLR 0 505 1 2643 191 24 8 chr5 168609238 168609735 -31020415 + LTR22 LTR ERVK 1 505 -4 218 227 55 64 chr5 168610826 168610936 -31019214 + L2 LINE L2 2553 2661 -653 338 256 99 41 chr5 168612682 168612803 -31017347 - MER5A DNA MER1_type -61 128 1 195 326 128 32 chr5 168613147 168613334 -31016816 + L3b LINE CR1 1220 1424 -159 215 222 37 12 chr5 168613563 168613633 -31016517 + (TA)n Simple_repeat Simple_repeat 1 75 -8 243 0 0 0 chr5 168613633 168613660 -31016490 + (CA)n Simple_repeat Simple_repeat 2 28 0 215 222 37 12 chr5 168613660 168613670 -31016480 + (TA)n Simple_repeat Simple_repeat 75 83 0 821 142 0 0 chr5 168613680 168613793 -31016357 - FLAM_C SINE Alu -25 118 6 686 259 93 35 chr5 168614200 168614597 -31015553 - L1ME4a LINE L1 -136 5985 5566 201 330 34 73 chr5 168615489 168615722 -31014428 + L2 LINE L2 2835 3058 -214 23 33 0 0 chr5 168615772 168615802 -31014348 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 168616038 168616061 -31014089 + AT_rich Low_complexity Low_complexity 1 23 0 461 282 75 17 chr5 168616227 168616468 -31013682 - L1MEc LINE L1 -3530 2685 2431 418 258 56 66 chr5 168616513 168616797 -31013353 - L1MEc LINE L1 -3784 2457 2199 278 288 150 21 chr5 168616932 168617165 -31012985 - HAL1 LINE L1 -946 1561 1299 * 435 223 54 0 chr5 168617147 168617259 -31012891 - L1MD1 LINE L1 0 6242 6125 22 35 0 0 chr5 168618055 168618084 -31012066 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr5 168618532 168618577 -31011573 + AT_rich Low_complexity Low_complexity 1 45 0 271 237 118 0 chr5 168618598 168618674 -31011476 - MIR SINE MIR -41 221 137 275 248 117 22 chr5 168619430 168619567 -31010583 + MIR SINE MIR 111 260 -2 588 255 28 7 chr5 168619577 168619722 -31010428 + MIR SINE MIR 1 148 -114 291 321 29 0 chr5 168619722 168619862 -31010288 + L1ME LINE L1 137 280 -5925 698 245 20 26 chr5 168619893 168620046 -31010104 - MSTC LTR MaLR 0 373 227 2121 125 3 0 chr5 168620046 168620341 -31009809 - AluSx SINE Alu -16 296 1 462 88 0 0 chr5 168620341 168620398 -31009752 - AluSg/x SINE Alu -177 133 77 1229 198 0 0 chr5 168620399 168620611 -31009539 - AluSx SINE Alu -100 212 1 820 141 41 35 chr5 168620715 168620912 -31009238 - MSTC LTR MaLR -176 189 1 311 325 55 12 chr5 168620921 168621084 -31009066 + L1ME LINE L1 323 492 -5713 306 277 51 0 chr5 168621544 168621681 -31008469 + L1ME LINE L1 596 739 -4958 311 296 23 35 chr5 168621850 168622022 -31008128 + L1ME LINE L1 1918 2087 -4309 186 43 0 0 chr5 168622035 168622058 -31008092 + (AATAG)n Simple_repeat Simple_repeat 5 27 0 389 277 54 18 chr5 168622083 168622456 -31007694 + L1ME LINE L1 2171 2689 -3526 200 300 43 29 chr5 168622693 168622763 -31007387 + L2 LINE L2 2604 2674 -640 1812 241 33 59 chr5 168622790 168623465 -31006685 + L1MC4 LINE L1 7249 7905 -137 22 35 0 0 chr5 168623468 168623497 -31006653 + AT_rich Low_complexity Low_complexity 1 29 0 370 201 64 57 chr5 168623552 168623696 -31006454 + L1MC4 LINE L1 7907 7995 0 292 252 119 101 chr5 168623713 168623872 -31006278 + MER5A DNA MER1_type 2 163 -26 942 245 123 11 chr5 168623950 168624325 -31005825 - MER113 DNA MER1_type? -102 419 3 457 218 54 34 chr5 168624664 168624811 -31005339 + L1ME LINE L1 5625 5774 -347 1165 191 6 0 chr5 168625023 168625206 -31004944 + MER5A DNA MER1_type 3 186 -3 506 278 107 19 chr5 168625208 168625424 -31004726 + MLT1L LTR MaLR 147 381 -234 21 71 0 0 chr5 168625767 168625809 -31004341 + AT_rich Low_complexity Low_complexity 1 42 0 457 280 218 9 chr5 168626227 168626438 -31003712 - MIR SINE MIR -1 261 7 238 325 13 13 chr5 168627408 168627485 -31002665 + L2 LINE L2 3134 3210 -62 512 276 96 35 chr5 168627537 168627798 -31002352 - L3 LINE CR1 -11 1566 1290 710 290 68 93 chr5 168628199 168628279 -31001871 + L2 LINE L2 2477 2557 -756 2113 123 3 0 chr5 168628279 168628572 -31001578 + AluSg SINE Alu 1 294 -16 710 290 68 93 chr5 168628572 168629338 -31000812 + L2 LINE L2 2557 3311 -2 487 240 80 46 chr5 168629525 168629700 -31000450 + L3 LINE CR1 1362 1542 -35 399 306 80 5 chr5 168630328 168630527 -30999623 - MIR SINE MIR -27 235 22 188 267 250 8 chr5 168630543 168630663 -30999487 + MER5A DNA MER1_type 39 187 -2 * 526 208 28 0 chr5 168630570 168630676 -30999474 - MER5A DNA MER1_type -77 112 4 196 292 77 0 chr5 168631225 168631290 -30998860 - L3 LINE CR1 -1 1576 1507 566 271 110 38 chr5 168631304 168631540 -30998610 + MER112 DNA MER1_type 8 260 0 503 244 31 8 chr5 168631695 168631822 -30998328 + MIR SINE MIR 120 249 -13 263 266 133 9 chr5 168632641 168632754 -30997396 - MIR3 SINE MIR -22 186 60 363 279 82 38 chr5 168633003 168633161 -30996989 - MIR SINE MIR -26 236 72 1181 238 189 21 chr5 168633363 168634004 -30996146 - L2 LINE L2 -2 3311 2588 266 318 39 84 chr5 168634062 168634216 -30995934 - MIR3 SINE MIR -40 168 22 194 331 79 24 chr5 168634494 168634621 -30995529 - L2 LINE L2 -10 3303 3170 351 291 0 77 chr5 168635027 168635069 -30995081 - MIR3 SINE MIR -14 194 150 1074 205 71 5 chr5 168635069 168635279 -30994871 + MER58A DNA MER1_type 1 224 0 351 291 0 77 chr5 168635279 168635353 -30994797 - MIR3 SINE MIR -58 150 87 1073 269 93 29 chr5 168635428 168635881 -30994269 - L2 LINE L2 -2 3311 2830 455 259 155 36 chr5 168636161 168636354 -30993796 + MIR SINE MIR 47 262 0 337 347 144 43 chr5 168636685 168637031 -30993119 - L2 LINE L2 -26 3246 2866 5716 115 16 13 chr5 168637637 168638126 -30992024 + L1PB3 LINE L1 5293 5779 -524 1917 148 3 25 chr5 168638126 168638443 -30991707 + AluJb SINE Alu 1 310 -2 5716 115 16 13 chr5 168638443 168638822 -30991328 + L1PB3 LINE L1 5779 6303 0 423 188 45 80 chr5 168639644 168639669 -30990481 - MIR3 SINE MIR -29 179 155 973 193 50 6 chr5 168639669 168639850 -30990300 - MER5A DNA MER1_type 0 189 1 423 188 45 80 chr5 168639850 168639936 -30990214 - MIR3 SINE MIR -53 155 72 238 243 75 28 chr5 168640327 168640434 -30989716 + L2 LINE L2 3115 3226 -87 194 366 116 0 chr5 168641142 168641254 -30988896 + MIR SINE MIR 27 151 -111 481 244 74 0 chr5 168641719 168641854 -30988296 + MIR SINE MIR 104 248 -14 21 36 0 0 chr5 168641889 168641917 -30988233 + AT_rich Low_complexity Low_complexity 1 28 0 2328 238 101 6 chr5 168641998 168642541 -30987609 - MLT1G1 LTR MaLR 0 595 1 201 278 24 101 chr5 168642785 168642954 -30987196 + MIR SINE MIR 106 261 -1 232 316 0 38 chr5 168643816 168643895 -30986255 - L2 LINE L2 -4 3309 3234 262 309 111 51 chr5 168643926 168644143 -30986007 + MIR SINE MIR 12 241 -21 287 315 34 62 chr5 168644269 168644447 -30985703 + MER5A DNA MER1_type 17 189 0 1972 204 53 91 chr5 168644547 168645193 -30984957 - MLT1E3 LTR MaLR -3 621 1 1063 213 93 0 chr5 168645585 168645801 -30984349 - MER46A DNA MER2_type 0 236 1 297 284 170 36 chr5 168645807 168646001 -30984149 - MIR SINE MIR -29 233 14 24 0 0 0 chr5 168646430 168646454 -30983696 + AT_rich Low_complexity Low_complexity 1 24 0 960 212 126 52 chr5 168646689 168647207 -30982943 + MLT1F LTR MaLR 52 541 -1 201 265 20 0 chr5 168647303 168647352 -30982798 + MIR3 SINE MIR 111 160 -48 570 271 23 63 chr5 168647725 168647946 -30982204 - MIR SINE MIR -2 260 49 681 306 62 17 chr5 168648164 168648583 -30981567 + L1ME2 LINE L1 5522 5959 -205 267 170 0 0 chr5 168649087 168649134 -30981016 - L2 LINE L2 0 3313 3267 300 256 124 39 chr5 168649319 168649448 -30980702 - MIR3 SINE MIR -54 154 15 362 241 62 9 chr5 168649781 168649893 -30980257 + MIR3 SINE MIR 5 122 -86 930 301 99 36 chr5 168650072 168650596 -30979554 + MLT1K LTR MaLR 24 580 -8 582 279 83 15 chr5 168651837 168652041 -30978109 - MIR SINE MIR -9 253 36 379 226 11 11 chr5 168652150 168652243 -30977907 + MIR3 SINE MIR 67 159 -49 490 277 32 48 chr5 168652487 168652675 -30977475 - MIR SINE MIR -2 260 76 354 226 108 66 chr5 168653481 168653583 -30976567 + MIR3 SINE MIR 41 154 -54 522 266 10 59 chr5 168653583 168653786 -30976364 + MER117 DNA MER1_type 2 194 -3 354 226 108 66 chr5 168653786 168653835 -30976315 + MIR3 SINE MIR 154 199 -9 437 310 122 0 chr5 168654145 168654342 -30975808 - MIR SINE MIR -1 261 41 585 250 38 61 chr5 168655447 168655659 -30974491 - MIR SINE MIR -14 248 42 256 195 26 133 chr5 168655832 168655853 -30974297 - MIR3 SINE MIR -21 187 165 2939 66 0 0 chr5 168655853 168656219 -30973931 + L1PA5 LINE L1 5789 6154 0 2252 102 7 0 chr5 168656229 168656575 -30973575 + AluSx SINE Alu 1 312 0 256 195 26 133 chr5 168656575 168656655 -30973495 - MIR3 SINE MIR -52 156 87 264 253 44 22 chr5 168656869 168656960 -30973190 - MIR3 SINE MIR -7 201 109 695 264 70 31 chr5 168657004 168657262 -30972888 + Charlie7 DNA MER1_type 54 321 -2291 18444 172 24 25 chr5 168657406 168662759 -30967391 - L1PA11 LINE L1 -5 7607 497 2896 184 23 32 chr5 168662861 168663417 -30966733 - L1PA11 LINE L1 -7021 560 10 954 240 48 54 chr5 168663427 168663742 -30966408 + Charlie7 DNA MER1_type 1486 1800 -812 2622 65 0 0 chr5 168663742 168664050 -30966100 + AluY SINE Alu 1 308 -3 954 240 48 54 chr5 168664050 168664105 -30966045 + Charlie7 DNA MER1_type 1800 1854 -758 186 103 0 0 chr5 168664468 168664497 -30965653 + (CA)n Simple_repeat Simple_repeat 2 30 0 234 192 27 27 chr5 168664503 168664576 -30965574 + HAL1b LINE L1 1237 1309 -39 2198 86 11 4 chr5 168664612 168664923 -30965227 - AluSc SINE Alu 0 313 1 206 333 108 26 chr5 168665118 168665313 -30964837 + L2 LINE L2 2720 2930 -384 192 323 71 47 chr5 168665478 168665605 -30964545 + L2 LINE L2 3142 3271 -1 187 253 22 77 chr5 168665927 168666018 -30964132 - L2 LINE L2 -5 3267 3182 1418 83 0 0 chr5 168666021 168666189 -30963961 + AluSc SINE Alu 1 168 -141 324 172 31 0 chr5 168666362 168666426 -30963724 + L2 LINE L2 2907 2972 -341 382 299 60 49 chr5 168666603 168666787 -30963363 - Charlie8 DNA MER1_type -2127 290 105 3846 63 2 14 chr5 168667410 168667919 -30962231 - L1PA4 LINE L1 -3 6152 5650 5174 66 3 5 chr5 168667919 168668573 -30961577 - L1PA8 LINE L1 -13 6159 5495 1582 191 16 29 chr5 168668573 168668887 -30961263 - MLT1A1 LTR MaLR -55 310 1 308 329 0 0 chr5 168668891 168668970 -30961180 - MIR SINE MIR -181 81 3 1950 118 7 4 chr5 168669111 168669390 -30960760 - AluSp SINE Alu -33 280 1 239 219 203 24 chr5 168670814 168670937 -30959213 - MIR SINE MIR -28 234 90 199 206 59 59 chr5 168671062 168671130 -30959020 - MIR SINE MIR -97 165 98 477 254 103 6 chr5 168671306 168671471 -30958679 - MIR SINE MIR -80 182 2 7116 65 0 1 chr5 168671815 168672708 -30957442 + L1PA6 LINE L1 5257 6148 -6 3054 114 12 21 chr5 168672720 168673202 -30956948 + L1PB1 LINE L1 5674 6151 0 410 222 88 52 chr5 168673617 168673811 -30956339 - Charlie1a DNA MER1_type -6 1449 1249 4584 176 113 47 chr5 168674681 168675832 -30954318 + Charlie1a DNA MER1_type 11 1237 -218 4529 92 3 2 chr5 168675932 168676553 -30953597 + L1PA8 LINE L1 5538 6159 -13 4161 26 16 8 chr5 168676553 168677040 -30953110 + L1PA4 LINE L1 5650 6152 -3 340 176 103 0 chr5 168677040 168677108 -30953042 + MLT1A1 LTR MaLR 289 363 -2 550 252 23 0 chr5 168677110 168677241 -30952909 + MIR SINE MIR 81 214 -48 423 288 54 58 chr5 168678250 168678455 -30951695 + Charlie8 DNA MER1_type 87 290 -2127 324 172 31 0 chr5 168678632 168678696 -30951454 - L2 LINE L2 -341 2972 2907 226 255 122 20 chr5 168679551 168679649 -30950501 - L1ME4a LINE L1 -1 6120 6013 448 361 13 0 chr5 168679755 168679910 -30950240 + MIR SINE MIR 30 186 -76 263 267 75 48 chr5 168680826 168680972 -30949178 - L1ME4a LINE L1 -383 5738 5589 212 259 69 0 chr5 168682253 168682311 -30947839 - L2 LINE L2 -5 3267 3206 1417 221 141 26 chr5 168682376 168682829 -30947321 + MLT1D LTR MaLR 1 505 0 1712 184 47 37 chr5 168683580 168683960 -30946190 + MLT1B LTR MaLR 3 386 -4 397 250 77 48 chr5 168684638 168684806 -30945344 - MIR3 SINE MIR -7 201 29 385 327 144 4 chr5 168685347 168685604 -30944546 + L3b LINE CR1 1102 1394 -189 300 314 65 8 chr5 168685669 168685793 -30944357 + MIR SINE MIR 61 191 -71 1300 180 26 6 chr5 168686213 168686480 -30943670 + MER44D DNA MER2_type 18 558 -51 203 302 52 26 chr5 168687230 168687346 -30942804 - L2 LINE L2 -468 2846 2728 439 318 98 16 chr5 168687541 168687796 -30942354 + L3 LINE CR1 1258 1533 -44 597 221 9 0 chr5 168689237 168689350 -30940800 - MER81 DNA DNA 0 114 1 316 272 0 48 chr5 168689351 168689476 -30940674 + MIR SINE MIR 113 231 -31 231 281 31 0 chr5 168689743 168689807 -30940343 + L2 LINE L2 3207 3272 0 497 274 135 42 chr5 168691002 168691175 -30938975 + Charlie8 DNA MER1_type 109 315 -2102 1068 214 8 41 chr5 168691175 168691442 -30938708 + MIR SINE MIR 5 262 0 497 274 135 42 chr5 168691442 168691527 -30938623 + Charlie8 DNA MER1_type 315 391 -2026 548 252 62 49 chr5 168692902 168693128 -30937022 - MIR SINE MIR -4 258 30 199 315 0 0 chr5 168693144 168693198 -30936952 - MIR SINE MIR -162 100 47 2190 106 10 7 chr5 168693656 168693958 -30936192 + AluSq SINE Alu 5 307 -6 210 326 107 25 chr5 168694189 168694385 -30935765 + MIR SINE MIR 20 231 -31 372 43 0 0 chr5 168694808 168694854 -30935296 + (TG)n Simple_repeat Simple_repeat 1 46 0 199 302 73 0 chr5 168694988 168695084 -30935066 + MIR SINE MIR 140 242 -20 349 346 10 0 chr5 168695236 168695340 -30934810 + L2 LINE L2 3144 3248 -24 821 279 116 25 chr5 168695387 168695871 -30934279 - L3 LINE CR1 -57 1520 993 232 138 23 35 chr5 168695873 168695960 -30934190 + (TA)n Simple_repeat Simple_repeat 1 86 0 358 267 52 0 chr5 168696290 168696401 -30933749 - MIR SINE MIR -67 141 37 213 39 0 0 chr5 168696439 168696465 -30933685 + (TTG)n Simple_repeat Simple_repeat 2 27 0 228 284 25 91 chr5 168696483 168696680 -30933470 - MIR SINE MIR -48 214 31 844 127 8 15 chr5 168697708 168697842 -30932308 + FLAM_C SINE Alu 1 133 0 356 275 23 38 chr5 168698172 168698303 -30931847 + MIR SINE MIR 129 257 -5 383 123 0 14 chr5 168699232 168699305 -30930845 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 260 155 0 17 chr5 168699306 168699364 -30930786 + GA-rich Low_complexity Low_complexity 1 57 0 192 97 0 0 chr5 168702555 168702586 -30927564 + (T)n Simple_repeat Simple_repeat 1 31 0 1154 238 106 21 chr5 168702840 168703265 -30926885 + MER113 DNA MER1_type? 54 514 -7 423 312 98 5 chr5 168704589 168704794 -30925356 - L3 LINE CR1 -35 1542 1319 23 0 0 0 chr5 168708504 168708527 -30921623 + GC_rich Low_complexity Low_complexity 1 23 0 201 243 0 0 chr5 168708874 168708911 -30921239 + polypyrimidine Low_complexity Low_complexity 3 39 0 846 339 94 15 chr5 168709338 168709922 -30920228 + L3 LINE CR1 941 1570 -7 651 305 20 20 chr5 168711153 168711268 -30918882 + MIR SINE MIR 1 115 -147 2147 120 0 0 chr5 168711268 168711593 -30918557 - AluSx SINE Alu 0 325 1 651 305 20 20 chr5 168711593 168711725 -30918425 + MIR SINE MIR 114 249 -13 2102 107 3 14 chr5 168712784 168713104 -30917046 - AluSc SINE Alu 0 309 1 224 244 24 24 chr5 168713205 168713287 -30916863 + GA-rich Low_complexity Low_complexity 1 82 0 255 289 37 52 chr5 168713351 168713486 -30916664 - MIR SINE MIR -110 152 20 429 308 21 0 chr5 168713757 168713900 -30916250 - L2 LINE L2 -3 3310 3165 757 191 71 24 chr5 168715068 168715236 -30914914 + MER5B DNA MER1_type 3 178 0 217 382 18 27 chr5 168717096 168717206 -30912944 - MIR SINE MIR -64 144 36 211 336 36 9 chr5 168717287 168717397 -30912753 - MIR3 SINE MIR -9 199 87 338 287 69 0 chr5 168721348 168721449 -30908701 - MIR SINE MIR -124 138 31 2192 131 3 6 chr5 168722340 168722652 -30907498 + AluSx SINE Alu 1 311 -1 518 162 51 152 chr5 168722832 168723029 -30907121 + MER5B DNA MER1_type 1 177 -1 396 297 164 0 chr5 168723798 168723993 -30906157 - MIR SINE MIR -6 256 30 370 329 0 47 chr5 168724041 168724211 -30905939 + MIR3 SINE MIR 13 174 -34 1286 179 5 0 chr5 168724218 168724436 -30905714 + MER20 DNA MER1_type 1 219 0 630 280 184 22 chr5 168725140 168725554 -30904596 + L2 LINE L2 2833 3313 0 396 254 48 24 chr5 168725804 168725930 -30904220 - MIR SINE MIR -22 240 112 225 275 38 76 chr5 168726173 168726226 -30903924 + MER117 DNA MER1_type 68 121 -76 2367 72 3 3 chr5 168726226 168726519 -30903631 + AluY SINE Alu 1 293 -18 225 275 38 76 chr5 168726519 168726596 -30903554 + MER117 DNA MER1_type 121 193 -4 357 243 40 98 chr5 168727008 168727181 -30902969 - MIR3 SINE MIR -23 185 23 2155 111 4 0 chr5 168727608 168727915 -30902235 + AluSg SINE Alu 1 308 0 432 343 93 43 chr5 168728642 168729062 -30901088 + MLT1K LTR MaLR 140 580 -8 345 324 103 7 chr5 168729946 168730091 -30900059 - MIR3 SINE MIR -40 168 10 363 292 88 21 chr5 168730607 168730799 -30899351 - MIR SINE MIR -26 236 32 917 201 0 17 chr5 168730856 168731030 -30899120 + FAM SINE Alu 1 171 -4 381 205 27 71 chr5 168731187 168731299 -30898851 - MIR SINE MIR -70 192 86 625 195 73 8 chr5 168732163 168732286 -30897864 + FLAM_A SINE Alu 1 131 -2 469 323 18 18 chr5 168732624 168732684 -30897466 - MIR SINE MIR -41 221 162 2261 89 27 0 chr5 168732684 168732976 -30897174 + AluY SINE Alu 1 300 -11 469 323 18 18 chr5 168732976 168733132 -30897018 - MIR SINE MIR -99 163 5 513 275 142 26 chr5 168733550 168733783 -30896367 + MIR SINE MIR 2 261 -1 278 257 21 38 chr5 168733956 168734060 -30896090 - MIR3 SINE MIR -53 155 52 1540 246 133 39 chr5 168734439 168734972 -30895178 - MLT1G LTR MaLR 0 590 8 204 299 52 0 chr5 168735198 168735295 -30894855 + L2 LINE L2 2470 2571 -743 725 271 179 14 chr5 168735307 168735815 -30894335 + L2 LINE L2 2712 3311 -2 388 263 53 26 chr5 168735964 168736078 -30894072 - MIR3 SINE MIR -7 201 85 1751 128 0 0 chr5 168736954 168737196 -30892954 - AluSx SINE Alu -13 299 58 718 250 40 23 chr5 168738262 168738438 -30891712 + MLT1J2 LTR MaLR 29 207 -243 235 233 136 19 chr5 168738457 168738560 -30891590 + MLT1J1 LTR MaLR 302 416 -30 633 277 101 45 chr5 168739600 168739957 -30890193 - L2 LINE L2 0 3313 2937 2324 114 0 0 chr5 168739957 168740264 -30889886 + AluSx SINE Alu 1 307 -5 319 282 182 0 chr5 168741130 168741300 -30888850 + MIR SINE MIR 53 253 -9 340 298 48 0 chr5 168741450 168741534 -30888616 - MIR3 SINE MIR -25 183 96 429 107 4 4 chr5 168741803 168742027 -30888123 + AluSq SINE Alu 1 313 0 661 260 39 26 chr5 168742494 168742736 -30887414 + MIR SINE MIR 23 262 0 222 281 12 12 chr5 168742832 168742914 -30887236 + MIR3 SINE MIR 96 177 -31 207 186 0 0 chr5 168743079 168743122 -30887028 + (CA)n Simple_repeat Simple_repeat 2 44 0 324 292 125 0 chr5 168743326 168743446 -30886704 + MIR SINE MIR 1 135 -127 193 358 0 0 chr5 168743546 168743613 -30886537 - MIR3 SINE MIR -31 177 111 1873 146 3 17 chr5 168743695 168743996 -30886154 + AluSx SINE Alu 5 301 -11 350 329 139 35 chr5 168743997 168744429 -30885721 - L2 LINE L2 -84 3229 2753 468 289 33 0 chr5 168744701 168744822 -30885328 + L2 LINE L2 3188 3312 -1 6233 100 12 77 chr5 168746087 168747203 -30882947 + L1MA3 LINE L1 5262 6305 0 2155 131 0 6 chr5 168747273 168747587 -30882563 + AluSx SINE Alu 1 312 0 336 289 33 16 chr5 168747616 168747737 -30882413 + MLT1K LTR MaLR 450 572 -16 658 211 64 23 chr5 168748203 168748421 -30881729 + L2 LINE L2 3080 3306 -7 538 213 0 0 chr5 168748688 168748782 -30881368 + MER33 DNA MER1_type 1 94 -230 6271 171 26 6 chr5 168748798 168749852 -30880298 + L1MA2 LINE L1 22 1096 -6469 10452 143 15 14 chr5 168749854 168750138 -30880012 + L1MA2 LINE L1 4831 5113 -2610 2243 123 0 13 chr5 168750138 168750454 -30879696 + AluSx SINE Alu 1 312 0 10452 143 15 14 chr5 168750454 168753060 -30877090 + L1MA2 LINE L1 5113 7723 0 356 137 145 0 chr5 168753079 168753196 -30876954 + MER33 DNA MER1_type 130 263 -100 603 154 51 63 chr5 168753217 168753392 -30876758 + MER33 DNA MER1_type 186 358 -5 2658 32 3 7 chr5 168753544 168753852 -30876298 - AluY SINE Alu -4 307 1 448 255 31 120 chr5 168754562 168754754 -30875396 + MER5A DNA MER1_type 12 186 -3 2525 70 7 0 chr5 168755457 168755759 -30874391 + AluSc SINE Alu 1 304 -5 2672 96 3 0 chr5 168755772 168756126 -30874024 - THE1A LTR MaLR 0 355 1 11277 97 30 3 chr5 168756126 168757665 -30872485 - THE1A-int LTR MaLR 0 1580 1 2712 86 11 0 chr5 168757665 168758016 -30872134 - THE1A LTR MaLR 0 355 1 1228 148 5 0 chr5 168758026 168758222 -30871928 - MLT2B1 LTR ERVL -321 199 3 2401 172 79 82 chr5 168758579 168759138 -30871012 - MER68 LTR ERV1 -5 557 1 1608 182 84 33 chr5 168759254 168759970 -30870180 - LTR1B LTR ERV1 0 826 1 347 288 30 15 chr5 168762108 168762240 -30867910 + MIR3 SINE MIR 73 206 -2 2814 122 84 29 chr5 168762518 168763100 -30867050 + MER4B LTR ERV1 1 779 0 3864 92 13 29 chr5 168763289 168763845 -30866305 + LTR10B LTR ERV1 1 547 0 235 337 0 0 chr5 168764083 168764169 -30865981 + L2 LINE L2 3186 3271 -1 539 110 40 30 chr5 168764675 168764775 -30865375 - MER53 DNA DNA -2 187 87 7067 58 14 2 chr5 168764875 168765901 -30864249 + L1PA6 LINE L1 5119 6154 0 196 30 61 0 chr5 168765907 168765940 -30864210 + A-rich Low_complexity Low_complexity 3 37 0 2696 80 14 0 chr5 168766458 168766808 -30863342 - THE1A LTR MaLR 0 355 1 10991 98 40 3 chr5 168766808 168768331 -30861819 - THE1A-int LTR MaLR 0 1580 1 2582 92 20 0 chr5 168768331 168768679 -30861471 - THE1A LTR MaLR 0 355 1 210 352 19 9 chr5 168769033 168769141 -30861009 - L2 LINE L2 -4 3268 3160 294 73 0 0 chr5 168769147 168769188 -30860962 + (CA)n Simple_repeat Simple_repeat 2 42 0 1885 147 55 0 chr5 168769669 168769961 -30860189 + AluSx SINE Alu 1 308 -4 5583 81 1 6 chr5 168770015 168770747 -30859403 + L1PA4 LINE L1 1 729 -5417 * 31427 33 2 1 chr5 168770744 168775270 -30854880 + L1PA4 LINE L1 1622 6152 -3 436 255 65 39 chr5 168775639 168775870 -30854280 + L1MC4 LINE L1 5568 5804 -317 395 304 9 0 chr5 168775989 168776101 -30854049 + Tigger7 DNA MER2_type 2475 2587 0 345 283 92 61 chr5 168776872 168777170 -30852980 - L1ME4a LINE L1 -11 6110 5823 2231 113 3 0 chr5 168777170 168777462 -30852688 - AluSx SINE Alu -19 293 1 345 283 92 61 chr5 168777462 168777770 -30852380 - L1ME4a LINE L1 -298 5823 5485 260 198 57 94 chr5 168777998 168778104 -30852046 - L1ME4a LINE L1 -44 6077 5976 863 132 0 22 chr5 168778105 168778241 -30851909 - FLAM_C SINE Alu 0 133 1 2296 30 0 8 chr5 168778307 168778571 -30851579 + AluY SINE Alu 1 262 -49 701 237 84 12 chr5 168778688 168778879 -30851271 - L1ME4a LINE L1 -172 5990 5775 1919 149 105 0 chr5 168778879 168779194 -30850956 + MER7A DNA MER2_type 1 346 0 701 237 84 12 chr5 168779194 168779251 -30850899 - L1ME4a LINE L1 -387 5775 5724 303 347 150 18 chr5 168779253 168779991 -30850159 + L2 LINE L2 2026 2861 -453 1238 290 85 62 chr5 168780216 168780760 -30849390 + MLT1K LTR MaLR 24 579 -9 485 294 276 3 chr5 168781203 168781587 -30848563 - L2 LINE L2 -1 3312 2824 2301 104 0 0 chr5 168781807 168782104 -30848046 - AluSg SINE Alu -13 297 1 280 280 15 90 chr5 168782283 168782483 -30847667 - MIR3 SINE MIR -22 186 2 555 213 115 22 chr5 168782810 168782993 -30847157 - MIR SINE MIR -10 252 53 29 28 0 0 chr5 168783058 168783094 -30847056 + AT_rich Low_complexity Low_complexity 1 36 0 3662 226 145 59 chr5 168783106 168783413 -30846737 + L1MC4 LINE L1 5869 6148 -1894 1858 139 21 95 chr5 168783413 168783802 -30846348 + MER46B DNA MER2_type 1 235 -1 3662 226 145 59 chr5 168783802 168785318 -30844832 + L1MC4 LINE L1 6148 8032 -10 287 216 48 57 chr5 168785655 168785787 -30844363 + MIR SINE MIR 14 145 -63 1004 215 54 41 chr5 168785788 168786104 -30844046 + L1MB7 LINE L1 5849 6168 -16 266 255 61 0 chr5 168786751 168786849 -30843301 - L2 LINE L2 -13 3259 3156 187 263 18 18 chr5 168787091 168787148 -30843002 + MIR SINE MIR 94 150 -58 * 473 262 17 68 chr5 168787143 168787380 -30842770 + MIR SINE MIR 8 232 -30 472 302 19 6 chr5 168787779 168787933 -30842217 + MIR SINE MIR 1 153 -63 239 333 62 31 chr5 168788058 168788220 -30841930 + MER5A DNA MER1_type 19 185 -4 218 306 19 37 chr5 168788932 168789040 -30841110 - MIR SINE MIR -77 185 80 239 278 28 0 chr5 168789090 168789162 -30840988 + L3 LINE CR1 1502 1575 -2 1932 164 82 46 chr5 168789553 168789705 -30840445 - Tigger2a DNA MER2_type -2274 434 289 2185 113 3 0 chr5 168789705 168789997 -30840153 - AluSg SINE Alu -17 293 1 1932 164 82 46 chr5 168789997 168790259 -30839891 - Tigger2a DNA MER2_type -2419 289 5 211 322 0 0 chr5 168790339 168790398 -30839752 - MIR SINE MIR -118 144 86 241 309 146 6 chr5 168790619 168790784 -30839366 - MIR SINE MIR -55 207 20 204 83 56 0 chr5 168792390 168792426 -30837724 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 264 304 0 12 chr5 168792508 168792618 -30837532 + MIR SINE MIR 35 140 -68 279 298 0 23 chr5 168793433 168793564 -30836586 + CT-rich Low_complexity Low_complexity 2 129 0 268 275 18 24 chr5 168793605 168793772 -30836378 + (TCTCTG)n Simple_repeat Simple_repeat 2 167 0 2284 106 0 13 chr5 168794241 168794544 -30835606 + AluSx SINE Alu 1 299 -13 216 286 88 11 chr5 168794694 168794785 -30835365 - MER5A DNA MER1_type -2 187 90 209 330 18 9 chr5 168794842 168794951 -30835199 + L3 LINE CR1 1375 1484 -93 6449 20 7 1 chr5 168795083 168795815 -30834335 + L1PA4 LINE L1 5409 6144 -11 243 0 0 0 chr5 168795833 168795860 -30834290 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 361 224 182 71 chr5 168796567 168796737 -30833413 + MIR3 SINE MIR 3 191 -17 187 266 25 25 chr5 168797050 168797129 -30833021 - MIR SINE MIR -70 138 60 230 284 29 20 chr5 168797269 168797371 -30832779 + MIR SINE MIR 16 118 -90 269 234 43 11 chr5 168797431 168797525 -30832625 + MIR SINE MIR 33 129 -79 341 263 19 66 chr5 168798918 168799110 -30831040 - MIR SINE MIR -50 212 30 345 255 49 10 chr5 168799782 168799884 -30830266 - MIR SINE MIR -88 174 69 267 267 125 17 chr5 168800411 168800531 -30829619 - MIR3 SINE MIR -69 139 7 1868 168 10 0 chr5 168800682 168800991 -30829159 + AluJb SINE Alu 1 312 0 810 286 89 5 chr5 168801108 168801321 -30828829 + L3 LINE CR1 1277 1507 -70 227 272 86 25 chr5 168801317 168801398 -30828752 + MER5A DNA MER1_type 7 92 -97 * 186 301 133 0 chr5 168801421 168801504 -30828646 + L3 LINE CR1 1484 1577 0 420 275 251 0 chr5 168802258 168802429 -30827721 - MIR SINE MIR -46 216 3 296 211 88 35 chr5 168802446 168802617 -30827533 + L1ME4a LINE L1 5724 5903 -218 289 317 21 20 chr5 168802835 168802966 -30827184 + MIR SINE MIR 23 141 -67 240 234 0 0 chr5 168803080 168803127 -30827023 - MIR SINE MIR -12 250 204 752 245 30 5 chr5 168803138 168803338 -30826812 + MER45C DNA AcHobo 1 205 -748 552 213 121 0 chr5 168803348 168803478 -30826672 + MER45C DNA AcHobo 714 827 -754 1806 148 0 45 chr5 168803478 168803789 -30826361 - AluJb SINE Alu -15 297 1 552 213 121 0 chr5 168803789 168803860 -30826290 + MER45C DNA AcHobo 827 950 -3 483 247 105 31 chr5 168803860 168804022 -30826128 - MIR SINE MIR -84 178 5 255 290 72 24 chr5 168804271 168804400 -30825750 + MIR SINE MIR 51 186 -22 396 332 70 4 chr5 168805682 168805926 -30824224 + MIR SINE MIR 2 261 -1 863 153 38 0 chr5 168806398 168806555 -30823595 - L1MD2 LINE L1 -25 6334 6172 535 132 103 126 chr5 168806740 168806914 -30823236 - L1MD2 LINE L1 -209 6150 5981 1159 225 4 30 chr5 168807097 168807333 -30822817 + MIR SINE MIR 1 230 -32 643 307 83 0 chr5 168807363 168807581 -30822569 - MIR SINE MIR -25 237 2 286 194 129 0 chr5 168807935 168807997 -30822153 - MER66B LTR ERV1 0 486 417 1295 194 83 26 chr5 168808248 168808636 -30821514 - MER66A LTR ERV1 0 478 169 227 239 94 86 chr5 168808760 168808877 -30821273 + L2 LINE L2 3138 3255 -17 536 306 17 11 chr5 168808903 168809083 -30821067 + MIR3 SINE MIR 16 196 -12 345 271 94 0 chr5 168809185 168809270 -30820880 - L2 LINE L2 -1 3271 3179 2214 82 4 4 chr5 168810941 168811221 -30818929 + AluSp SINE Alu 1 280 -33 216 0 0 0 chr5 168811221 168811245 -30818905 + (CA)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr5 168812219 168812241 -30817909 + AT_rich Low_complexity Low_complexity 1 22 0 325 265 211 20 chr5 168815057 168815204 -30814946 - MIR3 SINE MIR -31 177 3 21 0 0 0 chr5 168815222 168815243 -30814907 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 168816754 168816783 -30813367 + AT_rich Low_complexity Low_complexity 1 29 0 1810 199 16 7 chr5 168817177 168817615 -30812535 + L1MB7 LINE L1 4622 5063 -1083 3544 181 55 35 chr5 168817617 168817859 -30812291 + L1MB7 LINE L1 5171 5407 -777 2193 114 19 7 chr5 168817859 168818167 -30811983 + AluSq SINE Alu 2 313 0 3544 181 55 35 chr5 168818167 168818892 -30811258 + L1MB7 LINE L1 5407 6153 -31 21 36 0 0 chr5 168819052 168819080 -30811070 + AT_rich Low_complexity Low_complexity 1 28 0 297 189 0 0 chr5 168819152 168819205 -30810945 + MER44D DNA MER2_type 1 53 -652 1017 188 167 57 chr5 168819305 168819641 -30810509 + MSTB2 LTR MaLR 68 440 -17 606 158 0 0 chr5 168819642 168819743 -30810407 + MSTB2 LTR MaLR 357 457 0 1467 137 38 0 chr5 168819745 168820007 -30810143 + MER44D DNA MER2_type 325 596 -109 4765 112 62 76 chr5 168820009 168820267 -30809883 + L1MA4A LINE L1 5230 5490 -813 2229 112 10 0 chr5 168820267 168820563 -30809587 + AluSx SINE Alu 1 299 -13 4765 112 62 76 chr5 168820563 168821405 -30808745 + L1MA4A LINE L1 5490 6296 -7 858 170 7 0 chr5 168821416 168821563 -30808587 + MER44D DNA MER2_type 586 605 0 354 264 46 0 chr5 168821837 168821924 -30808226 - MIR SINE MIR -15 247 157 513 264 76 64 chr5 168821936 168822328 -30807822 - L2 LINE L2 -9 3304 2945 337 280 165 50 chr5 168822645 168822863 -30807287 + MIR SINE MIR 20 262 0 204 97 0 0 chr5 168823315 168823346 -30806804 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 330 300 80 44 chr5 168823451 168823701 -30806449 + MLT1J LTR MaLR 109 367 -144 190 282 103 0 chr5 168824009 168824087 -30806063 + L2 LINE L2 1932 2017 -1297 2520 70 0 0 chr5 168824091 168824391 -30805759 - AluSq SINE Alu -13 300 1 605 201 83 7 chr5 168824415 168824559 -30805591 - L1ME3 LINE L1 -11 6151 5997 330 250 18 9 chr5 168824777 168824889 -30805261 + L1MC4 LINE L1 7930 8042 0 189 245 0 0 chr5 168825973 168826022 -30804128 + (TAG)n Simple_repeat Simple_repeat 2 50 0 306 314 95 29 chr5 168826061 168826236 -30803914 - MIR SINE MIR -56 206 16 511 309 155 27 chr5 168826305 168826707 -30803443 - L2 LINE L2 -228 3044 2590 39 74 0 0 chr5 168827561 168827642 -30802508 + AT_rich Low_complexity Low_complexity 1 81 0 649 204 139 13 chr5 168828434 168828664 -30801486 - MIR SINE MIR -2 260 2 11451 201 39 12 chr5 168828856 168831731 -30798419 + L1PBa LINE L1 6 2802 -4060 2461 81 3 0 chr5 168831731 168832040 -30798110 + AluSp SINE Alu 1 310 -3 11451 201 39 12 chr5 168832040 168834435 -30795715 + L1PBa LINE L1 2802 5690 -1172 * 12339 67 6 3 chr5 168834421 168836152 -30793998 + L1P LINE L1 2687 4422 -1724 2074 133 0 0 chr5 168836649 168836934 -30793216 - AluSx SINE Alu -27 285 1 207 0 0 0 chr5 168837008 168837031 -30793119 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 24 32 0 0 chr5 168837473 168837504 -30792646 + AT_rich Low_complexity Low_complexity 1 31 0 1852 207 119 41 chr5 168837506 168838145 -30792005 + L1ME3A LINE L1 5481 6169 -1 721 253 11 11 chr5 168838948 168839126 -30791024 + L1ME1 LINE L1 5887 6064 -102 292 243 10 0 chr5 168839229 168839331 -30790819 + L1ME1 LINE L1 6075 6184 0 952 301 30 55 chr5 168839498 168840164 -30789986 + L1MEc LINE L1 32 681 -5715 2160 148 0 0 chr5 168840164 168840475 -30789675 + AluSx SINE Alu 1 311 -1 952 301 30 55 chr5 168840475 168840515 -30789635 + L1MEc LINE L1 681 720 -5676 516 319 79 36 chr5 168840650 168840979 -30789171 - L3 LINE CR1 -86 1491 1149 1193 187 23 4 chr5 168840979 168841236 -30788914 + MER4C LTR ERV1 1 262 -203 329 302 150 43 chr5 168841544 168841918 -30788232 + MLT1L LTR MaLR 202 615 0 209 268 38 102 chr5 168842428 168842585 -30787565 - MIR SINE MIR -6 256 110 5275 162 57 14 chr5 168844006 168845190 -30784960 - L1MD2 LINE L1 -10 6349 5108 1211 235 29 32 chr5 168845719 168846060 -30784090 + MER102b DNA MER1_type 2 341 0 255 230 40 54 chr5 168846376 168846450 -30783700 - L2 LINE L2 0 3313 3241 769 132 0 54 chr5 168846704 168846833 -30783317 - FLAM_C SINE Alu -11 122 1 408 253 247 0 chr5 168847285 168847479 -30782671 + MIR SINE MIR 2 243 -19 901 284 239 12 chr5 168848134 168848645 -30781505 - L2 LINE L2 -5 3308 2686 262 247 155 10 chr5 168848696 168848793 -30781357 - MIR3 SINE MIR -4 204 94 213 203 220 17 chr5 168848908 168848967 -30781183 + MER5A DNA MER1_type 1 71 -118 1433 183 129 5 chr5 168849113 168849517 -30780633 - Charlie1b DNA MER1_type 0 523 70 610 255 142 5 chr5 168849649 168849861 -30780289 + MIR SINE MIR 21 261 -1 388 250 0 0 chr5 168850155 168850235 -30779915 + MIR SINE MIR 72 151 -111 776 256 34 5 chr5 168850536 168850743 -30779407 + MER58A DNA MER1_type 12 224 0 739 283 52 0 chr5 168850802 168850993 -30779157 - MIR SINE MIR -19 243 43 549 279 117 60 chr5 168851051 168851503 -30778647 - MER113 DNA MER1_type? -27 494 17 2200 123 0 0 chr5 168851507 168851815 -30778335 + AluSx SINE Alu 1 308 -4 335 313 68 34 chr5 168851843 168851990 -30778160 + MIR3 SINE MIR 23 174 -34 418 222 164 43 chr5 168852718 168852879 -30777271 - MIR SINE MIR -61 147 14 1017 247 68 60 chr5 168853261 168853714 -30776436 + LTR16A1 LTR ERVL 1 457 0 187 279 0 0 chr5 168854043 168854086 -30776064 + MIR SINE MIR 70 112 -150 484 292 39 39 chr5 168854374 168854503 -30775647 + MLT1I LTR MaLR 232 363 -46 2665 149 28 22 chr5 168854503 168854765 -30775385 - MLT1C LTR MaLR 0 467 199 225 0 0 0 chr5 168854765 168854790 -30775360 + (TG)n Simple_repeat Simple_repeat 2 26 0 2665 149 28 22 chr5 168854790 168854991 -30775159 - MLT1C LTR MaLR -268 199 1 484 292 39 39 chr5 168854991 168855039 -30775111 + MLT1I LTR MaLR 362 409 0 282 333 21 0 chr5 168855086 168855182 -30774968 - MIR SINE MIR -152 110 13 546 356 27 14 chr5 168857038 168857260 -30772890 + MIR SINE MIR 23 247 -15 680 307 53 9 chr5 168857341 168857566 -30772584 + MIR SINE MIR 15 249 -13 186 208 0 0 chr5 168857578 168857626 -30772524 + CT-rich Low_complexity Low_complexity 2 49 0 23 0 0 0 chr5 168859164 168859187 -30770963 + AT_rich Low_complexity Low_complexity 1 23 0 215 392 20 0 chr5 168859362 168859464 -30770686 + L2 LINE L2 3210 3313 0 433 83 125 14 chr5 168860664 168860736 -30769414 - MADE1 DNA Mariner 0 80 1 248 283 30 30 chr5 168860829 168860928 -30769222 + MLT1K LTR MaLR 5 103 -485 226 270 16 32 chr5 168862189 168862252 -30767898 - L3 LINE CR1 -6 1571 1510 631 240 60 55 chr5 168862291 168862474 -30767676 - MIR SINE MIR -16 246 63 1087 127 6 0 chr5 168862557 168862722 -30767428 - AluSg/x SINE Alu -13 297 132 217 25 0 75 chr5 168862722 168862762 -30767388 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 2150 86 4 0 chr5 168862762 168863041 -30767109 - AluSc SINE Alu -29 280 1 544 246 29 22 chr5 168863053 168863191 -30766959 + Charlie8 DNA MER1_type 103 241 -2176 471 311 99 9 chr5 168863192 168863506 -30766644 + L2 LINE L2 2709 3055 -258 1499 203 104 31 chr5 168863509 168863835 -30766315 + MLT1D LTR MaLR 1 350 -155 293 67 0 0 chr5 168863839 168863884 -30766266 + L1MC2 LINE L1 6290 6334 -10 469 296 112 15 chr5 168863910 168864106 -30766044 + MIR SINE MIR 40 254 -8 1052 147 6 0 chr5 168864234 168864397 -30765753 + MLT1D LTR MaLR 342 505 0 482 260 66 58 chr5 168864397 168864655 -30765495 + L2 LINE L2 3054 3313 0 548 213 161 3 chr5 168864872 168865018 -30765132 + MER5A DNA MER1_type 4 183 -6 254 328 0 0 chr5 168865567 168865628 -30764522 + L2 LINE L2 3249 3309 -4 2866 150 37 42 chr5 168866269 168866842 -30763308 + L1MC2 LINE L1 5765 6334 -10 540 275 119 5 chr5 168866873 168867066 -30763084 + MIR SINE MIR 40 254 -8 368 305 14 28 chr5 168867966 168868107 -30762043 - L3 LINE CR1 -11 1566 1428 199 261 203 0 chr5 168868132 168868201 -30761949 - MIR3 SINE MIR -31 177 95 407 321 12 36 chr5 168868342 168868507 -30761643 + MIR SINE MIR 86 246 -16 224 227 13 53 chr5 168869582 168869657 -30760493 - MIR SINE MIR -85 177 106 1257 219 123 96 chr5 168869659 168870222 -30759928 - MLT1K LTR MaLR -8 580 3 454 307 88 34 chr5 168870653 168870891 -30759259 - MIR SINE MIR -3 259 9 1178 264 107 58 chr5 168870962 168871484 -30758666 - MLT1K LTR MaLR 0 588 41 370 204 43 0 chr5 168871518 168871611 -30758539 - MLT1H LTR MaLR 0 549 453 627 276 114 9 chr5 168871641 168871851 -30758299 - MLT1H LTR MaLR -199 350 119 289 290 21 41 chr5 168872010 168872155 -30757995 - L2 LINE L2 -281 2991 2850 486 49 0 0 chr5 168872671 168872732 -30757418 + (TA)n Simple_repeat Simple_repeat 2 62 0 240 35 0 0 chr5 168872731 168872760 -30757390 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 242 185 15 15 chr5 168872765 168872830 -30757320 + (TA)n Simple_repeat Simple_repeat 1 65 0 469 98 158 12 chr5 168875744 168875826 -30754324 - MER51A LTR ERV1 -540 94 1 3916 125 22 16 chr5 168875826 168876449 -30753701 - L1MC1 LINE L1 -291 6042 5416 803 115 26 0 chr5 168876449 168876562 -30753588 + MER4B LTR ERV1 495 610 0 2128 113 0 0 chr5 168876595 168876888 -30753262 + AluSg SINE Alu 3 295 -15 639 143 9 9 chr5 168876917 168877029 -30753121 - MER4A LTR ERV1 -552 112 1 414 250 0 11 chr5 168877036 168877128 -30753022 + L2 LINE L2 3223 3313 0 300 282 0 13 chr5 168877331 168877409 -30752741 + MIR SINE MIR 61 137 -71 243 313 0 30 chr5 168877469 168877536 -30752614 + MIR3 SINE MIR 135 199 -9 2053 132 82 40 chr5 168877667 168878068 -30752082 - LTR48 LTR ERV1 0 787 370 251 83 0 21 chr5 168878187 168878235 -30751915 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 804 220 127 39 chr5 168878237 168878520 -30751630 + L2 LINE L2 2676 2980 -292 2395 154 17 41 chr5 168878572 168878904 -30751246 - L1MB3 LINE L1 -31 6152 5833 1600 149 6 72 chr5 168878904 168879225 -30750925 - AluJo SINE Alu -12 300 1 2395 154 17 41 chr5 168879225 168879360 -30750790 - L1MB3 LINE L1 -350 5833 5696 612 277 178 37 chr5 168879940 168880316 -30749834 + L2 LINE L2 2829 3257 -56 1981 167 20 3 chr5 168880330 168880671 -30749479 + MER7A DNA MER2_type 2 346 0 241 233 0 0 chr5 168880840 168880883 -30749267 + L2 LINE L2 3266 3308 -5 227 259 25 37 chr5 168881274 168881355 -30748795 + MIR SINE MIR 162 241 -21 1134 273 81 42 chr5 168881437 168881917 -30748233 + L2 LINE L2 2809 3307 -6 297 144 128 119 chr5 168882235 168882378 -30747772 + MIR3 SINE MIR 12 153 -63 394 267 26 123 chr5 168882523 168882718 -30747432 + L2 LINE L2 3017 3192 -80 1764 154 10 3 chr5 168882728 168883020 -30747130 - L1MC1 LINE L1 -1 6332 6039 1648 86 32 0 chr5 168883020 168883241 -30746909 - MER51A LTR ERV1 0 634 407 249 231 50 58 chr5 168883508 168883629 -30746521 - LTR48 LTR ERV1 -438 349 230 638 143 9 9 chr5 168883636 168883741 -30746409 - MER39 LTR ERV1 -602 105 1 754 198 111 12 chr5 168884272 168884434 -30745716 + MER5B DNA MER1_type 1 178 0 985 161 0 6 chr5 168884726 168884894 -30745256 + AluSg/x SINE Alu 137 303 -9 356 292 106 31 chr5 168885112 168885273 -30744877 + MLT1K LTR MaLR 158 330 -258 1088 259 86 18 chr5 168885308 168885748 -30744402 + LTR33 LTR ERVL 46 515 -6 271 329 132 21 chr5 168886672 168887005 -30743145 + L2 LINE L2 2588 3036 -236 690 258 37 11 chr5 168887130 168887320 -30742830 - MIR SINE MIR -8 254 60 762 134 25 32 chr5 168887349 168887506 -30742644 - L1MB8 LINE L1 -5 6173 6018 246 309 37 12 chr5 168887515 168887596 -30742554 + L2 LINE L2 3231 3313 0 1486 173 47 40 chr5 168887718 168888018 -30742132 - AluJo SINE Alu 0 302 1 1172 160 30 0 chr5 168888050 168888250 -30741900 - L1M3f LINE L1 -5109 219 14 303 317 71 49 chr5 168888262 168888392 -30741758 - MIR SINE MIR -8 254 117 1700 199 80 20 chr5 168888392 168888738 -30741412 - MSTB LTR MaLR 0 426 51 2206 101 0 3 chr5 168888738 168889046 -30741104 - AluSc SINE Alu -2 307 1 1700 199 80 20 chr5 168889046 168889100 -30741050 - MSTB LTR MaLR -375 51 2 303 317 71 49 chr5 168889100 168889152 -30740998 - MIR SINE MIR -145 117 68 489 289 86 0 chr5 168889251 168889379 -30740771 - L2 LINE L2 0 3272 3134 180 274 16 16 chr5 168889444 168889506 -30740644 - MIR SINE MIR -130 78 17 1247 237 126 6 chr5 168889774 168890142 -30740008 - L1MC4a LINE L1 -610 5558 5484 423 195 0 148 chr5 168890151 168890211 -30739939 + Charlie8 DNA MER1_type 118 151 -190 396 0 0 0 chr5 168890211 168890255 -30739895 + (CA)n Simple_repeat Simple_repeat 2 45 0 423 195 0 148 chr5 168890255 168890322 -30739828 + Charlie8 DNA MER1_type 151 226 -115 207 333 78 0 chr5 168890606 168890696 -30739454 + L3b LINE CR1 1273 1369 -214 * 324 316 89 74 chr5 168890694 168891030 -30739120 - L2 LINE L2 0 3272 2932 709 216 187 137 chr5 168891035 168891559 -30738591 - MLT1K LTR MaLR -29 559 10 388 333 25 8 chr5 168891611 168891731 -30738419 - MIR SINE MIR -57 151 30 314 262 35 83 chr5 168892178 168892323 -30737827 - HAL1 LINE L1 -5 2502 2365 769 281 87 17 chr5 168892328 168892559 -30737591 - MIR SINE MIR -8 254 8 306 206 29 0 chr5 168892589 168892657 -30737493 - HAL1 LINE L1 -193 2314 2245 227 257 122 14 chr5 168892832 168892906 -30737244 + L2 LINE L2 3232 3313 0 865 286 5 113 chr5 168893363 168893761 -30736389 + L2 LINE L2 2917 3271 -1 296 296 155 21 chr5 168894057 168894199 -30735951 + MER5B DNA MER1_type 1 161 -17 2025 161 83 22 chr5 168894641 168895052 -30735098 - MER31B LTR ERV1 -30 436 1 229 326 163 0 chr5 168895158 168895250 -30734900 + L2 LINE L2 3125 3231 -41 831 213 53 0 chr5 168895341 168895510 -30734640 - MER5A DNA MER1_type 0 189 12 2123 118 3 0 chr5 168895523 168895828 -30734322 - AluSp SINE Alu -7 306 1 1403 215 103 30 chr5 168896331 168896699 -30733451 + MER115 DNA AcHobo 299 693 0 572 149 6 149 chr5 168896973 168897147 -30733003 + MER4C LTR ERV1 1 149 -316 263 292 208 0 chr5 168897220 168897374 -30732776 + MIR SINE MIR 77 262 0 388 257 29 9 chr5 168897579 168897684 -30732466 - MER5A DNA MER1_type -48 141 35 373 295 39 47 chr5 168897581 168897710 -30732440 + MER5A DNA MER1_type 62 189 0 * 535 332 84 40 chr5 168897732 168897785 -30732365 + L3 LINE CR1 1314 1363 -214 1950 125 16 0 chr5 168897785 168897799 -30732351 - AluSg SINE Alu -1 309 297 1202 90 11 0 chr5 168897799 168897976 -30732174 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1950 125 16 0 chr5 168897976 168898265 -30731885 - AluSg SINE Alu -13 297 1 535 332 84 40 chr5 168898265 168898437 -30731713 + L3 LINE CR1 1363 1549 -28 520 240 123 0 chr5 168899454 168899600 -30730550 - MIR SINE MIR -12 250 87 396 276 63 8 chr5 168899648 168899775 -30730375 + MIR SINE MIR 22 155 -107 2093 120 0 0 chr5 168899783 168900084 -30730066 + AluSx SINE Alu 12 312 0 500 202 0 0 chr5 168900126 168900210 -30729940 + MLT1D LTR MaLR 1 84 -421 201 74 0 0 chr5 168900243 168900270 -30729880 + (TAA)n Simple_repeat Simple_repeat 2 28 0 403 220 83 28 chr5 168900960 168901069 -30729081 - L2 LINE L2 0 3272 3158 475 229 0 0 chr5 168901369 168901465 -30728685 + MIR SINE MIR 49 144 -118 487 226 127 44 chr5 168901584 168901765 -30728385 + L2 LINE L2 3118 3313 0 480 187 24 0 chr5 168902528 168902651 -30727499 + CT-rich Low_complexity Low_complexity 4 129 0 666 265 103 5 chr5 168903550 168903754 -30726396 + MIR SINE MIR 7 230 -32 960 135 6 19 chr5 168904088 168904244 -30725906 - AluSg/x SINE Alu -19 291 138 434 86 0 17 chr5 168904433 168904491 -30725659 - Alu SINE Alu -234 75 19 404 244 78 0 chr5 168904515 168904630 -30725520 + MIR SINE MIR 139 262 0 250 318 62 50 chr5 168904635 168904814 -30725336 - L2 LINE L2 -181 3091 2911 228 35 0 0 chr5 168904833 168904862 -30725288 + (CAGGG)n Simple_repeat Simple_repeat 1 29 0 309 253 84 0 chr5 168905360 168905455 -30724695 + L2 LINE L2 3160 3262 -10 377 277 181 17 chr5 168907003 168907180 -30722970 - MIR SINE MIR -56 206 1 210 322 61 17 chr5 168907187 168907302 -30722848 - L2 LINE L2 -866 2448 2329 2255 82 0 4 chr5 168908385 168908666 -30721484 + AluSp SINE Alu 1 280 -33 180 0 0 0 chr5 168908666 168908686 -30721464 + (CA)n Simple_repeat Simple_repeat 1 20 0 29 0 0 0 chr5 168908842 168908871 -30721279 + AT_rich Low_complexity Low_complexity 1 29 0 264 164 36 18 chr5 168909374 168909429 -30720721 - MLT1K LTR MaLR -18 570 515 225 267 12 23 chr5 168910128 168910214 -30719936 + CT-rich Low_complexity Low_complexity 5 89 0 570 294 62 9 chr5 168910694 168910926 -30719224 - MIR SINE MIR 0 262 23 194 350 97 0 chr5 168910954 168911057 -30719093 + L3 LINE CR1 1392 1504 -73 425 301 32 39 chr5 168911101 168911257 -30718893 - MER5A DNA MER1_type -22 167 13 184 342 56 41 chr5 168911909 168912105 -30718045 + L2 LINE L2 647 845 -2469 207 191 24 0 chr5 168912477 168912519 -30717631 + L2 LINE L2 3270 3312 -1 670 230 124 39 chr5 168912644 168912927 -30717223 - MER113 DNA MER1_type? -214 307 1 272 191 0 0 chr5 168913105 168913152 -30716998 + L2 LINE L2 3210 3256 -16 882 238 22 5 chr5 168914334 168914519 -30715631 - MIR3 SINE MIR -5 203 16 190 335 53 47 chr5 168915254 168915424 -30714726 + L3b LINE CR1 1153 1323 -260 326 250 60 0 chr5 168915426 168915510 -30714640 - MER91C DNA MER1_type 0 140 52 189 0 0 0 chr5 168915728 168915749 -30714401 + (T)n Simple_repeat Simple_repeat 1 21 0 190 325 0 77 chr5 168916986 168917103 -30713047 - L3 LINE CR1 -88 1489 1382 275 333 160 7 chr5 168919076 168919220 -30710930 + MIR3 SINE MIR 20 185 -23 1605 159 4 15 chr5 168920741 168921011 -30709139 - AluJo SINE Alu -45 267 1 1370 187 28 31 chr5 168922639 168922928 -30707222 - AluJo SINE Alu -23 289 2 331 323 146 0 chr5 168923425 168923555 -30706595 + MIR SINE MIR 41 189 -73 252 234 16 16 chr5 168923622 168923686 -30706464 - L3 LINE CR1 -598 979 916 882 229 70 94 chr5 168923703 168923901 -30706249 - MLT1J LTR MaLR -10 501 300 1901 213 62 40 chr5 168923901 168924381 -30705769 - LTR16C LTR ERVL 0 491 1 882 229 70 94 chr5 168924381 168924693 -30705457 - MLT1J LTR MaLR -211 300 3 270 299 26 0 chr5 168924920 168924997 -30705153 - L2 LINE L2 0 3313 3235 245 266 224 10 chr5 168925030 168925222 -30704928 - L2 LINE L2 -257 3056 2824 255 61 0 0 chr5 168925392 168925425 -30704725 + (A)n Simple_repeat Simple_repeat 1 33 0 2100 130 36 0 chr5 168925458 168925759 -30704391 - AluSx SINE Alu 0 312 1 202 335 29 110 chr5 168926270 168926479 -30703671 - L2 LINE L2 -61 3211 3020 181 225 138 25 chr5 168926701 168926781 -30703369 - L2 LINE L2 -222 3050 2962 1936 267 46 68 chr5 168927176 168927968 -30702182 + L2 LINE L2 2156 2924 -389 2301 64 6 70 chr5 168927968 168928297 -30701853 + AluSc SINE Alu 1 308 -1 1936 267 46 68 chr5 168928297 168928671 -30701479 + L2 LINE L2 2924 3305 -8 1951 106 12 94 chr5 168928925 168929264 -30700886 - AluSx SINE Alu -1 311 1 2046 117 55 0 chr5 168929264 168929554 -30700596 - AluSx SINE Alu -6 306 1 397 318 150 56 chr5 168929980 168930462 -30699688 - L2 LINE L2 -2 3270 2698 247 268 42 0 chr5 168930767 168930838 -30699312 + MIR3 SINE MIR 3 76 -132 205 282 223 0 chr5 168930929 168931032 -30699118 + MIR SINE MIR 63 188 -74 21 71 0 0 chr5 168931516 168931558 -30698592 + AT_rich Low_complexity Low_complexity 1 42 0 201 138 0 0 chr5 168931695 168931724 -30698426 + (TTCC)n Simple_repeat Simple_repeat 4 32 0 294 221 76 63 chr5 168931795 168932089 -30698061 - L1ME4a LINE L1 -168 5953 5631 207 238 95 36 chr5 168932238 168932322 -30697828 + MIR SINE MIR 172 260 -2 386 233 12 12 chr5 168932746 168932832 -30697318 - L2 LINE L2 0 3313 3228 479 295 0 0 chr5 168932843 168932972 -30697178 + MIR3 SINE MIR 68 196 -12 2004 113 36 0 chr5 168933013 168933322 -30696828 - AluSx SINE Alu 0 319 1 1927 204 56 31 chr5 168933444 168933891 -30696259 - MLT1C LTR MaLR -4 463 6 330 340 27 7 chr5 168934395 168934542 -30695608 + MIR SINE MIR 17 166 -96 925 68 0 0 chr5 168934543 168934661 -30695489 + L1MA3 LINE L1 5864 5981 -324 1761 175 0 0 chr5 168934661 168934935 -30695215 + AluSx SINE Alu 1 274 -38 3568 74 18 2 chr5 168934935 168935383 -30694767 - LTR22A LTR ERVK -3 455 1 1943 107 37 79 chr5 168935428 168935531 -30694619 + L1MA2 LINE L1 5966 6072 -232 1924 139 7 3 chr5 168935531 168935818 -30694332 + AluSx SINE Alu 1 288 -24 1943 107 37 79 chr5 168935818 168936068 -30694082 + L1MA2 LINE L1 6072 6304 0 337 211 47 62 chr5 168936072 168936200 -30693950 + MIR SINE MIR 137 262 0 2914 233 142 17 chr5 168936213 168937152 -30692998 + L2 LINE L2 1633 2689 -625 696 185 15 23 chr5 168937152 168937282 -30692868 + MER5B DNA MER1_type 2 130 -48 385 235 143 0 chr5 168937287 168937385 -30692765 + L2 LINE L2 2695 2806 -508 453 222 50 0 chr5 168937412 168937511 -30692639 + L2 LINE L2 3209 3312 -1 8178 32 7 0 chr5 168938079 168938970 -30691180 - MER11D LTR ERVK 0 897 1 189 195 0 0 chr5 168938989 168939030 -30691120 + (TA)n Simple_repeat Simple_repeat 2 42 0 195 42 0 0 chr5 168939032 168939056 -30691094 + (CA)n Simple_repeat Simple_repeat 2 25 0 883 145 0 0 chr5 168939175 168939299 -30690851 + FLAM_C SINE Alu 1 124 -19 324 0 0 0 chr5 168939461 168939497 -30690653 + (TG)n Simple_repeat Simple_repeat 1 36 0 1118 163 31 125 chr5 168939514 168939802 -30690348 - AluJo SINE Alu -30 282 22 21 0 0 31 chr5 168939947 168939962 -30690188 + AT_rich Low_complexity Low_complexity 1 15 -16 2172 106 7 0 chr5 168939962 168940254 -30689896 + AluSx SINE Alu 1 294 -18 21 0 0 31 chr5 168940254 168940270 -30689880 + AT_rich Low_complexity Low_complexity 15 31 0 647 234 105 14 chr5 168940270 168940479 -30689671 - MIR SINE MIR 0 262 35 2558 76 0 0 chr5 168940642 168940946 -30689204 - AluSx SINE Alu -8 304 1 438 281 70 22 chr5 168940946 168941131 -30689019 + MIR SINE MIR 62 255 -7 208 236 36 18 chr5 168941140 168941195 -30688955 - MIR SINE MIR -114 148 93 308 266 148 53 chr5 168941599 168941768 -30688382 - MIR3 SINE MIR -19 189 5 601 132 33 0 chr5 168942724 168942815 -30687335 - MER94 DNA DNA -40 94 1 574 290 12 18 chr5 168942815 168942984 -30687166 + MIR SINE MIR 18 185 -77 602 258 141 5 chr5 168943125 168943338 -30686812 + MIR SINE MIR 20 261 -1 376 250 0 0 chr5 168943632 168943712 -30686438 + MIR SINE MIR 72 151 -111 790 251 34 5 chr5 168944013 168944220 -30685930 + MER58A DNA MER1_type 12 224 0 719 283 52 0 chr5 168944279 168944470 -30685680 - MIR SINE MIR -19 243 43 649 279 118 58 chr5 168944528 168944979 -30685171 - MER113 DNA MER1_type? -27 494 17 2297 127 0 0 chr5 168944983 168945291 -30684859 + AluSx SINE Alu 1 308 -4 322 358 34 7 chr5 168945319 168945467 -30684683 + MIR3 SINE MIR 23 174 -34 397 242 152 31 chr5 168946194 168946355 -30683795 - MIR SINE MIR -62 146 14 1130 236 73 64 chr5 168946737 168947190 -30682960 + LTR16A1 LTR ERVL 1 457 0 181 279 0 0 chr5 168947519 168947562 -30682588 + MIR SINE MIR 70 112 -150 492 292 39 39 chr5 168947850 168947979 -30682171 + MLT1I LTR MaLR 232 363 -46 2812 149 28 22 chr5 168947979 168948241 -30681909 - MLT1C LTR MaLR 0 467 199 225 0 0 0 chr5 168948241 168948266 -30681884 + (TG)n Simple_repeat Simple_repeat 2 26 0 2812 149 28 22 chr5 168948266 168948467 -30681683 - MLT1C LTR MaLR -268 199 1 492 292 39 39 chr5 168948467 168948515 -30681635 + MLT1I LTR MaLR 362 409 0 280 333 21 0 chr5 168948562 168948658 -30681492 - MIR SINE MIR -152 110 13 523 356 27 14 chr5 168950512 168950734 -30679416 + MIR SINE MIR 23 247 -15 670 302 53 9 chr5 168950815 168951040 -30679110 + MIR SINE MIR 15 249 -13 186 208 0 0 chr5 168951052 168951100 -30679050 + CT-rich Low_complexity Low_complexity 2 49 0 23 0 0 0 chr5 168952638 168952661 -30677489 + AT_rich Low_complexity Low_complexity 1 23 0 202 402 20 0 chr5 168952836 168952938 -30677212 + L2 LINE L2 3210 3313 0 452 69 125 14 chr5 168954139 168954211 -30675939 - MADE1 DNA Mariner 0 80 1 248 283 30 30 chr5 168954304 168954403 -30675747 + MLT1K LTR MaLR 5 103 -485 208 268 0 36 chr5 168955664 168955720 -30674430 - L3 LINE CR1 -6 1571 1518 548 240 60 55 chr5 168955766 168955949 -30674201 - MIR SINE MIR -16 246 63 1155 127 6 0 chr5 168956032 168956197 -30673953 - AluSg/x SINE Alu -13 297 132 217 25 0 75 chr5 168956197 168956237 -30673913 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 2292 82 4 0 chr5 168956237 168956516 -30673634 - AluSc SINE Alu -29 280 1 541 246 29 22 chr5 168956528 168956666 -30673484 + Charlie8 DNA MER1_type 103 241 -2176 391 314 99 9 chr5 168956667 168956981 -30673169 + L2 LINE L2 2709 3055 -258 1508 199 104 31 chr5 168956984 168957310 -30672840 + MLT1D LTR MaLR 1 350 -155 299 67 0 0 chr5 168957314 168957359 -30672791 + L1MC2 LINE L1 6290 6334 -10 387 296 112 15 chr5 168957385 168957581 -30672569 + MIR SINE MIR 40 254 -8 1057 147 6 0 chr5 168957709 168957872 -30672278 + MLT1D LTR MaLR 342 505 0 379 260 66 58 chr5 168957872 168958130 -30672020 + L2 LINE L2 3054 3313 0 496 203 187 0 chr5 168958370 168958493 -30671657 + MER5A DNA MER1_type 38 183 -6 230 328 0 0 chr5 168959043 168959104 -30671046 + L2 LINE L2 3249 3309 -4 2804 142 42 55 chr5 168959745 168960323 -30669827 + L1MC2 LINE L1 5765 6334 -10 395 281 125 5 chr5 168960354 168960546 -30669604 + MIR SINE MIR 40 254 -8 310 305 14 28 chr5 168961472 168961613 -30668537 - L3 LINE CR1 -11 1566 1428 348 321 12 36 chr5 168961848 168962013 -30668137 + MIR SINE MIR 86 246 -16 198 231 39 0 chr5 168963110 168963162 -30666988 - MIR SINE MIR -103 159 106 1236 219 123 96 chr5 168963164 168963727 -30666423 - MLT1K LTR MaLR -8 580 3 416 273 96 35 chr5 168964198 168964396 -30665754 - MIR SINE MIR -44 218 9 1166 263 109 59 chr5 168964467 168964989 -30665161 - MLT1K LTR MaLR 0 588 41 632 261 91 9 chr5 168965024 168965354 -30664796 - MLT1H LTR MaLR 0 549 119 300 236 34 22 chr5 168965513 168965602 -30664548 - L2 LINE L2 -281 2991 2902 486 49 0 0 chr5 168966168 168966229 -30663921 + (TA)n Simple_repeat Simple_repeat 2 62 0 240 35 0 0 chr5 168966228 168966257 -30663893 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 242 185 15 15 chr5 168966262 168966327 -30663823 + (TA)n Simple_repeat Simple_repeat 2 66 0 1890 148 14 3 chr5 168966735 168967026 -30663124 + AluJb SINE Alu 1 294 -18 2148 108 31 0 chr5 168967028 168967315 -30662835 + AluSx SINE Alu 1 296 -16 214 255 0 0 chr5 168967574 168967625 -30662525 - MIR SINE MIR -33 229 179 21 57 0 0 chr5 168967735 168967770 -30662380 + AT_rich Low_complexity Low_complexity 1 35 0 279 173 58 0 chr5 168968016 168968068 -30662082 + L2 LINE L2 3209 3263 -9 192 298 0 0 chr5 168968772 168968829 -30661321 + MIR SINE MIR 84 140 -122 1869 147 3 60 chr5 168968890 168969209 -30660941 + AluJb SINE Alu 1 301 -11 1958 113 0 0 chr5 168969374 168969687 -30660463 - AluSx SINE Alu 0 350 38 511 273 0 0 chr5 168969747 168969879 -30660271 + L2 LINE L2 3182 3313 0 202 304 0 0 chr5 168970301 168970357 -30659793 + (CATA)n Simple_repeat Simple_repeat 3 58 0 1016 261 14 24 chr5 168970362 168970623 -30659527 - LTR16C LTR ERVL 0 491 232 2650 107 6 3 chr5 168970623 168970986 -30659164 - THE1B LTR MaLR 0 364 1 1016 261 14 24 chr5 168970986 168971015 -30659135 - LTR16C LTR ERVL -259 232 204 1895 176 7 0 chr5 168971564 168971870 -30658280 - AluJo SINE Alu -4 308 1 433 179 24 98 chr5 168971905 168972028 -30658122 - MLT1H LTR MaLR 0 549 436 246 267 122 30 chr5 168972215 168972346 -30657804 - MLT1H LTR MaLR -387 162 20 2366 92 0 0 chr5 168973417 168973711 -30656439 + AluY SINE Alu 1 294 -17 524 265 16 87 chr5 168974228 168974413 -30655737 + MIR3 SINE MIR 9 180 -28 665 274 127 4 chr5 168974433 168974678 -30655472 + Charlie8 DNA MER1_type 2 276 -2141 479 215 27 47 chr5 168974842 168974991 -30655159 - MIR SINE MIR -115 147 2 285 278 65 9 chr5 168975149 168975257 -30654893 - MIR3 SINE MIR -12 196 83 426 221 66 29 chr5 168975509 168975645 -30654505 - MIR3 SINE MIR -6 202 62 327 321 29 0 chr5 168976257 168976394 -30653756 - MIR SINE MIR -2 260 120 1639 200 0 10 chr5 168976438 168976748 -30653402 + AluJo SINE Alu 1 307 -5 681 301 77 37 chr5 168976833 168977208 -30652942 + L2 LINE L2 2920 3309 -4 423 278 51 28 chr5 168977941 168978117 -30652033 - MIR3 SINE MIR -6 202 23 1263 182 76 20 chr5 168978157 168978589 -30651561 + MLT1D LTR MaLR 1 505 0 1429 254 48 14 chr5 168978701 168979118 -30651032 + L1ME3 LINE L1 5731 6161 -1 630 277 96 0 chr5 168979165 168979385 -30650765 + MIR SINE MIR 22 262 0 940 248 5 0 chr5 168979431 168979637 -30650513 - MER63A DNA MER1_type -3 207 1 279 347 0 16 chr5 168979997 168980121 -30650029 + L2 LINE L2 2940 3061 -252 372 208 167 0 chr5 168980234 168980330 -30649820 - MIR SINE MIR -105 157 46 262 157 20 0 chr5 168980906 168980957 -30649193 + MIR SINE MIR 81 132 -130 234 228 0 18 chr5 168981018 168981075 -30649075 + L2 LINE L2 3255 3310 -3 223 313 60 0 chr5 168981130 168981197 -30648953 + L3 LINE CR1 1395 1465 -112 420 311 18 18 chr5 168981269 168981436 -30648714 + MIR SINE MIR 31 197 -65 362 171 184 13 chr5 168982605 168982681 -30647469 - FAM SINE Alu -42 133 45 372 309 146 34 chr5 168982988 168983405 -30646745 + L2 LINE L2 2804 3267 -5 771 148 0 0 chr5 168983500 168983615 -30646535 - Tigger1 DNA MER2_type -2303 115 1 184 280 21 32 chr5 168984038 168984131 -30646019 + MIR SINE MIR 29 121 -87 282 146 0 0 chr5 168984146 168984194 -30645956 - L2 LINE L2 0 3313 3266 6296 180 76 110 chr5 168984322 168985811 -30644339 + Tigger1 DNA MER2_type 1 1539 -879 1131 165 0 0 chr5 168985811 168985981 -30644169 + FAM SINE Alu 1 170 -15 2114 125 20 0 chr5 168985983 168986278 -30643872 + AluSg SINE Alu 1 301 -9 6296 180 76 110 chr5 168986278 168986875 -30643275 + Tigger1 DNA MER2_type 1540 2182 -236 32548 105 10 65 chr5 168986899 168990914 -30639236 + L1PA7 LINE L1 12 4245 -1909 441 0 0 0 chr5 168990914 168990963 -30639187 + (CA)n Simple_repeat Simple_repeat 2 50 0 32548 105 10 65 chr5 168990963 168991024 -30639126 + L1PA7 LINE L1 4245 4308 -1846 2366 78 0 14 chr5 168991024 168991319 -30638831 + AluY SINE Alu 1 291 -20 32548 105 10 65 chr5 168991319 168993028 -30637122 + L1PA7 LINE L1 4308 5395 -759 2358 86 3 0 chr5 168993028 168993320 -30636830 + AluSc SINE Alu 1 293 -16 32548 105 10 65 chr5 168993320 168994039 -30636111 + L1PA7 LINE L1 5395 6152 -2 1138 130 50 92 chr5 168994040 168994301 -30635849 + Tigger1 DNA MER2_type 2169 2418 0 352 238 14 91 chr5 168994321 168994369 -30635781 - Charlie8 DNA MER1_type -2224 193 143 1909 155 16 13 chr5 168994369 168994679 -30635471 - AluJb SINE Alu -1 311 1 352 238 14 91 chr5 168994679 168994773 -30635377 - Charlie8 DNA MER1_type -2274 143 62 208 357 115 11 chr5 168994896 168995078 -30635072 - L2 LINE L2 -68 3204 3004 1701 293 56 24 chr5 168995167 168996399 -30633751 + L1MC4a LINE L1 4513 5790 -748 346 172 17 0 chr5 168996427 168996485 -30633665 + MER81 DNA DNA 55 113 -1 440 249 47 47 chr5 168996485 168996698 -30633452 + L1MC4a LINE L1 5788 6000 -1808 420 284 20 65 chr5 168997021 168997222 -30632928 + L1MEc LINE L1 237 428 -5968 470 275 99 52 chr5 168997734 168998249 -30631901 - L2 LINE L2 -132 3181 2594 233 241 37 0 chr5 168998705 168998759 -30631391 + GA-rich Low_complexity Low_complexity 4 59 0 309 109 0 0 chr5 168998793 168998839 -30631311 + (CA)n Simple_repeat Simple_repeat 2 47 0 333 321 91 5 chr5 168999463 168999650 -30630500 + MER102b DNA MER1_type 138 340 -1 559 242 109 0 chr5 168999652 168999817 -30630333 - MIR SINE MIR -60 202 20 330 307 0 0 chr5 169000657 169000745 -30629405 + (CA)n Simple_repeat Simple_repeat 1 88 0 1791 179 88 42 chr5 169001245 169001652 -30628498 + MER31B LTR ERV1 1 426 -40 41 36 0 0 chr5 169001665 169001720 -30628430 + AT_rich Low_complexity Low_complexity 1 55 0 643 288 86 8 chr5 169002188 169002431 -30627719 - MIR SINE MIR 0 262 1 406 239 119 34 chr5 169002431 169002577 -30627573 + L2 LINE L2 3153 3313 0 186 43 0 0 chr5 169002876 169002899 -30627251 + (CA)n Simple_repeat Simple_repeat 2 24 0 372 212 0 24 chr5 169003002 169003087 -30627063 - MIR3 SINE MIR -3 205 123 1461 162 52 65 chr5 169003087 169003395 -30626755 + AluJo SINE Alu 1 304 -8 2426 97 0 3 chr5 169003399 169003710 -30626440 + AluSg SINE Alu 1 310 0 291 287 11 0 chr5 169003783 169003870 -30626280 - MIR3 SINE MIR -106 102 15 508 211 98 24 chr5 169004401 169004524 -30625626 + L2 LINE L2 3141 3272 0 577 234 66 0 chr5 169004933 169005070 -30625080 + MIR SINE MIR 47 192 -70 763 161 8 8 chr5 169005072 169005196 -30624954 + L2 LINE L2 3187 3310 -3 349 289 101 0 chr5 169005216 169005346 -30624804 - MIR SINE MIR -4 258 114 416 336 52 68 chr5 169005736 169006060 -30624090 + L2 LINE L2 2951 3269 -3 480 228 62 49 chr5 169006272 169006434 -30623716 - MIR3 SINE MIR -8 200 37 213 317 99 37 chr5 169006693 169006854 -30623296 - L2 LINE L2 -429 2885 2715 419 250 0 10 chr5 169007488 169007584 -30622566 + MER117 DNA MER1_type 1 95 -102 2223 192 38 26 chr5 169007645 169008144 -30622006 - MLT1D LTR MaLR 0 505 1 625 295 73 79 chr5 169008525 169008854 -30621296 - L2 LINE L2 0 3272 2946 615 188 29 9 chr5 169009079 169009223 -30620927 + MIR SINE MIR 17 154 -62 184 292 42 52 chr5 169009230 169009326 -30620824 + L2 LINE L2 3205 3299 -14 1659 168 10 7 chr5 169009676 169009967 -30620183 - AluJb SINE Alu -20 292 1 1166 140 0 0 chr5 169010086 169010257 -30619893 - AluSg/x SINE Alu -8 302 132 598 245 16 48 chr5 169010505 169010693 -30619457 + MIR SINE MIR 2 183 -79 366 266 121 16 chr5 169010743 169010867 -30619283 + L2 LINE L2 3177 3313 0 201 242 32 48 chr5 169010955 169011017 -30619133 - L2 LINE L2 -8 3305 3245 339 280 50 10 chr5 169011731 169011831 -30618319 - MIR3 SINE MIR -5 203 100 2179 108 3 10 chr5 169011950 169012264 -30617886 - AluSx SINE Alu 0 312 1 617 259 29 0 chr5 169012322 169012492 -30617658 + MER5B DNA MER1_type 1 175 -3 1653 168 0 7 chr5 169012534 169012851 -30617299 - AluJb SINE Alu 0 315 1 2080 233 108 10 chr5 169013135 169013637 -30616513 + MLT1E LTR MaLR 43 593 0 497 188 12 0 chr5 169013685 169013765 -30616385 + MER2 DNA MER2_type 1 81 -264 1665 150 0 74 chr5 169013779 169014105 -30616045 + AluJo SINE Alu 7 308 -4 418 107 13 13 chr5 169014105 169014164 -30615986 + (GGAA)n Simple_repeat Simple_repeat 1 62 -13 2156 118 0 6 chr5 169014164 169014478 -30615672 + AluSx SINE Alu 1 312 0 418 107 13 13 chr5 169014478 169014493 -30615657 + (GGAA)n Simple_repeat Simple_repeat 61 75 0 1059 107 17 6 chr5 169014493 169014671 -30615479 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 648 111 28 0 chr5 169014672 169014780 -30615370 + MER2 DNA MER2_type 96 206 -139 326 275 0 0 chr5 169014810 169014879 -30615271 + MER2 DNA MER2_type 270 338 -7 241 231 19 0 chr5 169014889 169014941 -30615209 + L2 LINE L2 3261 3313 0 304 321 68 37 chr5 169016164 169016326 -30613824 - MIR SINE MIR -14 248 82 256 306 210 36 chr5 169016481 169016896 -30613254 - L2 LINE L2 0 3313 2827 * 337 301 62 40 chr5 169016895 169017071 -30613079 - L2 LINE L2 -30 3283 3104 867 199 0 23 chr5 169017073 169017249 -30612901 + FRAM SINE Alu 1 171 -5 486 285 46 65 chr5 169017634 169017663 -30612487 + L1ME3 LINE L1 1452 1480 -4916 2276 100 3 0 chr5 169017663 169017974 -30612176 - AluSp SINE Alu -1 312 1 486 285 46 65 chr5 169017974 169018312 -30611838 + L1ME3 LINE L1 1480 1812 -4584 2042 110 35 0 chr5 169018345 169018635 -30611515 + AluSx SINE Alu 1 300 -12 930 175 40 72 chr5 169018646 169018897 -30611253 + L1MB8 LINE L1 5915 6157 -21 232 108 27 0 chr5 169018899 169018959 -30611191 + Alu SINE Alu 245 305 0 608 238 57 34 chr5 169019096 169019394 -30610756 + L1ME3 LINE L1 2212 2516 -3699 * 2989 264 69 19 chr5 169019387 169020738 -30609412 + L1ME3 LINE L1 2904 4321 -1894 1492 245 92 63 chr5 169020773 169021681 -30608469 + L1ME3 LINE L1 5066 6004 -227 708 190 232 51 chr5 169021755 169021841 -30608309 - LTR50 LTR ERVL 0 795 726 2185 81 0 3 chr5 169021841 169022164 -30607986 + AluSq SINE Alu 2 323 0 708 190 232 51 chr5 169022164 169022558 -30607592 - LTR50 LTR ERVL -69 726 101 438 203 176 47 chr5 169024402 169024550 -30605600 + MIR3 SINE MIR 37 203 -5 482 238 16 8 chr5 169026478 169026600 -30603550 + MIR SINE MIR 24 146 -62 301 292 100 8 chr5 169026620 169026740 -30603410 - MER117 DNA MER1_type -7 190 60 434 288 100 29 chr5 169027472 169027642 -30602508 - MIR3 SINE MIR -8 200 19 2286 91 3 3 chr5 169027834 169028143 -30602007 - AluSp SINE Alu -4 309 1 584 259 142 109 chr5 169028296 169028817 -30601333 - MLT1K LTR MaLR -14 574 37 194 278 167 11 chr5 169028950 169029040 -30601110 + MIR SINE MIR 24 127 -81 380 272 267 5 chr5 169029652 169029854 -30600296 - MIR SINE MIR 0 262 8 489 292 169 0 chr5 169030100 169030295 -30599855 + MIR SINE MIR 31 258 -4 203 327 26 53 chr5 169030566 169030679 -30599471 + L2 LINE L2 2955 3064 -208 193 247 25 86 chr5 169030699 169030780 -30599370 + MIR3 SINE MIR 104 179 -29 311 243 161 21 chr5 169031679 169031855 -30598295 + MIR SINE MIR 1 196 -63 402 289 14 2 chr5 169031858 169031983 -30598167 - MIR SINE MIR -71 137 8 332 261 0 0 chr5 169032717 169032786 -30597364 + MER102b DNA MER1_type 3 71 -270 207 0 0 0 chr5 169032895 169032918 -30597232 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 285 226 131 0 chr5 169032964 169033048 -30597102 + MER102b DNA MER1_type 198 292 -49 262 291 25 0 chr5 169033201 169033280 -30596870 - MIR SINE MIR -110 152 72 207 0 0 0 chr5 169033495 169033518 -30596632 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2171 118 0 0 chr5 169033569 169033875 -30596275 + AluSg SINE Alu 1 306 -4 708 308 107 4 chr5 169034325 169034559 -30595591 - MIR SINE MIR -3 259 2 295 226 16 0 chr5 169034563 169034625 -30595525 + MIR SINE MIR 89 151 -111 281 284 42 11 chr5 169035295 169035390 -30594760 - L3 LINE CR1 -54 1523 1426 226 273 34 45 chr5 169035446 169035534 -30594616 + L2 LINE L2 2985 3071 -201 968 181 40 6 chr5 169035796 169035973 -30594177 - MER58A DNA MER1_type -40 184 2 226 341 45 34 chr5 169035991 169036167 -30593983 + MIR3 SINE MIR 20 197 -11 1259 271 138 13 chr5 169036190 169036900 -30593250 + L2 LINE L2 2517 3313 0 1785 220 51 26 chr5 169037459 169037913 -30592237 + MLT1C LTR MaLR 3 467 0 194 105 26 0 chr5 169037941 169037979 -30592171 + (TG)n Simple_repeat Simple_repeat 2 40 0 208 285 191 26 chr5 169038587 169038854 -30591296 - L2 LINE L2 -386 2928 2618 465 245 0 0 chr5 169038986 169039088 -30591062 - MIR SINE MIR -34 228 127 186 282 42 28 chr5 169039307 169039378 -30590772 - MIR SINE MIR -96 112 41 221 272 79 54 chr5 169040126 169040295 -30589855 - MIR SINE MIR -2 260 23 30 0 0 0 chr5 169041737 169041767 -30588383 + AT_rich Low_complexity Low_complexity 1 30 0 361 265 31 99 chr5 169042437 169042492 -30587658 + L3 LINE CR1 1425 1482 -95 2356 64 3 10 chr5 169042492 169042803 -30587347 - AluY SINE Alu 0 311 3 361 265 31 99 chr5 169042803 169042909 -30587241 + L3 LINE CR1 1482 1575 -2 362 265 41 54 chr5 169043011 169043158 -30586992 - MIR SINE MIR -50 212 68 196 366 0 0 chr5 169044048 169044119 -30586031 - MIR SINE MIR -110 152 82 1419 164 23 8 chr5 169044135 169044391 -30585759 + AluJo SINE Alu 13 272 -40 487 242 75 8 chr5 169044902 169045022 -30585128 - MIR SINE MIR -113 149 22 2305 67 0 7 chr5 169045022 169045319 -30584831 - AluY SINE Alu -14 297 3 300 258 169 11 chr5 169045868 169045957 -30584193 - MIR SINE MIR -92 116 13 286 246 11 126 chr5 169046078 169046253 -30583897 - L2 LINE L2 -213 3059 2905 210 318 56 47 chr5 169046615 169046722 -30583428 - L2 LINE L2 -2 3270 3163 846 246 9 45 chr5 169046880 169047104 -30583046 + MIR SINE MIR 34 249 -13 2420 229 83 46 chr5 169047181 169047918 -30582232 - LTR41 LTR ERVL -6 767 4 1731 201 11 19 chr5 169047918 169048286 -30581864 - MLT1A1 LTR MaLR 0 365 1 883 214 99 15 chr5 169048294 169048556 -30581594 - MER46C DNA MER2_type -54 284 1 313 258 336 13 chr5 169048574 169048803 -30581347 + L2 LINE L2 2672 2974 -340 354 171 0 0 chr5 169048831 169048901 -30581249 + (CA)n Simple_repeat Simple_repeat 1 70 0 356 295 165 25 chr5 169048909 169049194 -30580956 + L2 LINE L2 2988 3312 -1 1319 190 86 47 chr5 169049204 169049590 -30580560 + L1MC4 LINE L1 7654 7995 0 1924 226 117 14 chr5 169050027 169050540 -30579610 - MLT1F1 LTR MaLR -1 566 1 190 333 83 0 chr5 169050944 169051016 -30579134 - MIR SINE MIR -51 211 134 230 286 0 14 chr5 169051058 169051128 -30579022 - MIR SINE MIR -123 139 71 501 65 0 0 chr5 169051175 169051237 -30578913 + Alu SINE Alu 2 63 -246 240 86 0 0 chr5 169054126 169054161 -30575989 + (GGGGA)n Simple_repeat Simple_repeat 4 38 0 341 287 11 0 chr5 169054343 169054430 -30575720 + MIR SINE MIR 61 148 -60 268 348 11 0 chr5 169054533 169054622 -30575528 - MER117 DNA MER1_type -11 186 97 816 165 31 0 chr5 169054882 169055009 -30575141 + FLAM_C SINE Alu 1 131 -2 390 232 79 47 chr5 169055059 169055258 -30574892 + MLT1L LTR MaLR 376 615 0 317 309 18 18 chr5 169055258 169055368 -30574782 - MER117 DNA MER1_type -87 110 1 212 79 53 0 chr5 169055473 169055511 -30574639 + A-rich Low_complexity Low_complexity 5 44 0 225 0 0 0 chr5 169056268 169056293 -30573857 + (A)n Simple_repeat Simple_repeat 1 25 0 2741 29 32 6 chr5 169056453 169056768 -30573382 - L1PA4 LINE L1 -1 6154 5832 412 320 62 16 chr5 169057897 169058141 -30572009 + L2 LINE L2 2622 2876 -438 348 301 14 99 chr5 169058214 169058506 -30571644 + L2 LINE L2 2985 3251 -21 366 238 49 67 chr5 169058549 169058713 -30571437 + MER5A DNA MER1_type 28 188 -1 183 263 88 12 chr5 169058713 169058791 -30571359 - MIR3 SINE MIR -40 168 85 258 56 0 0 chr5 169058795 169058831 -30571319 + (TC)n Simple_repeat Simple_repeat 2 37 0 243 0 0 0 chr5 169058831 169058858 -30571292 + (CA)n Simple_repeat Simple_repeat 1 27 0 485 312 188 10 chr5 169059376 169059780 -30570370 + L3 LINE CR1 1092 1567 -10 572 199 43 57 chr5 169059817 169059958 -30570192 - Charlie8 DNA MER1_type -2190 227 89 198 352 0 0 chr5 169060078 169060149 -30570001 - MIR SINE MIR -95 167 97 3745 204 55 15 chr5 169060954 169061902 -30568248 - L1ME1 LINE L1 -9 6157 5184 625 253 69 6 chr5 169062252 169062426 -30567724 - MIR SINE MIR -76 186 2 2192 123 0 0 chr5 169062627 169062928 -30567222 + AluSx SINE Alu 1 301 -11 246 212 15 30 chr5 169063565 169063631 -30566519 + (TTCA)n Simple_repeat Simple_repeat 1 65 0 391 183 38 153 chr5 169063634 169063765 -30566385 - L2 LINE L2 0 3272 3157 2238 118 0 3 chr5 169063765 169064071 -30566079 - AluSx SINE Alu -7 305 1 2445 73 0 3 chr5 169064080 169064382 -30565768 - AluY SINE Alu -10 301 1 1950 145 0 42 chr5 169064382 169064693 -30565457 - AluJo SINE Alu -14 298 1 2104 76 0 4 chr5 169064872 169065136 -30565014 + L1PA4 LINE L1 5893 6155 0 22 0 0 0 chr5 169065167 169065189 -30564961 + AT_rich Low_complexity Low_complexity 1 22 0 553 323 84 3 chr5 169065330 169065640 -30564510 - L1MEc LINE L1 -4653 1743 1409 560 222 23 23 chr5 169065643 169065667 -30564483 - L1MA10 LINE L1 0 6334 6311 3066 206 46 40 chr5 169065667 169066833 -30563317 - L1ME2 LINE L1 -16 6148 4971 2810 112 58 15 chr5 169066833 169067243 -30562907 + MSTA LTR MaLR 1 428 0 3066 206 46 40 chr5 169067243 169067388 -30562762 - L1ME2 LINE L1 -1193 4971 4828 836 286 136 56 chr5 169067385 169068026 -30562124 - L1MEc LINE L1 -5424 781 90 * 2338 80 0 17 chr5 169068436 169068736 -30561414 + AluY SINE Alu 2 296 -15 305 339 17 17 chr5 169068738 169068853 -30561297 + L2 LINE L2 3199 3313 0 336 317 32 32 chr5 169068913 169069036 -30561114 - L2 LINE L2 -9 3263 3141 230 329 59 0 chr5 169070004 169070089 -30560061 + MIR3 SINE MIR 70 159 -49 295 291 20 47 chr5 169071150 169071298 -30558852 + MIR SINE MIR 60 203 -59 675 272 196 40 chr5 169071359 169071763 -30558387 - L2 LINE L2 0 3313 2847 673 237 9 78 chr5 169071926 169072145 -30558005 + MIR SINE MIR 13 216 -46 257 286 32 79 chr5 169072525 169072651 -30557499 - MIR3 SINE MIR -85 123 4 306 254 110 34 chr5 169072667 169072785 -30557365 - L2 LINE L2 -3 3269 3143 939 190 176 0 chr5 169072945 169073161 -30556989 + MER69 DNA AcHobo 35 288 -938 566 237 53 13 chr5 169073462 169073614 -30556536 - MIR SINE MIR -9 253 96 260 265 0 15 chr5 169073646 169073714 -30556436 + MER45 DNA AcHobo 1 67 -886 359 315 16 71 chr5 169073781 169073965 -30556185 + L3 LINE CR1 1401 1574 -3 285 268 0 89 chr5 169074605 169074738 -30555412 + MIR SINE MIR 59 178 -57 208 219 24 0 chr5 169074840 169074881 -30555269 - MIR SINE MIR -111 151 110 717 336 9 5 chr5 169075098 169075321 -30554829 + MIR SINE MIR 7 230 -32 263 242 11 63 chr5 169076171 169076266 -30553884 + MIR3 SINE MIR 95 184 -24 1917 181 72 5 chr5 169076577 169076953 -30553197 - L1MC3 LINE L1 -237 7548 7148 281 430 6 6 chr5 169076986 169077144 -30553006 - L2 LINE L2 0 3272 3115 463 270 142 28 chr5 169077835 169078080 -30552070 - MIR SINE MIR -1 261 3 1502 133 120 29 chr5 169078323 169078632 -30551518 + MER1B DNA MER1_type 1 337 0 228 250 105 0 chr5 169078670 169078746 -30551404 - L2 LINE L2 -53 3219 3136 356 358 23 14 chr5 169078816 169079031 -30551119 - MIR SINE MIR -14 248 32 462 256 35 47 chr5 169079233 169079405 -30550745 + MIR SINE MIR 86 255 -7 416 277 87 44 chr5 169079808 169080014 -30550136 + MIR SINE MIR 36 250 -12 475 279 112 57 chr5 169080355 169080533 -30549617 - L1ME4a LINE L1 -31 6090 5923 406 103 29 0 chr5 169080533 169080601 -30549549 + L1MA7 LINE L1 6222 6291 0 475 279 112 57 chr5 169080601 169080860 -30549290 - L1ME4a LINE L1 -198 5923 5629 347 285 0 77 chr5 169081079 169081209 -30548941 - MIR SINE MIR -114 148 29 212 280 120 40 chr5 169081268 169081393 -30548757 + MER5A DNA MER1_type 55 189 0 642 245 17 99 chr5 169081979 169082212 -30547938 + MIR SINE MIR 17 230 -32 1002 269 19 0 chr5 169082467 169082723 -30547427 + MIR SINE MIR 2 262 0 448 225 26 60 chr5 169082904 169083055 -30547095 - MIR3 SINE MIR -18 190 45 851 171 0 0 chr5 169083276 169083399 -30546751 + FLAM_C SINE Alu 1 123 -10 25 31 0 0 chr5 169083399 169083431 -30546719 + AT_rich Low_complexity Low_complexity 1 32 0 221 298 24 24 chr5 169083457 169083541 -30546609 + L3 LINE CR1 1251 1334 -243 203 316 73 62 chr5 169083695 169083872 -30546278 - L2 LINE L2 -160 3112 2934 517 230 77 56 chr5 169084333 169084529 -30545621 - MIR SINE MIR -17 245 46 19349 32 2 1 chr5 169084800 169087769 -30542381 - L1PA4 LINE L1 -1 6154 3185 273 340 82 0 chr5 169088028 169088125 -30542025 + MIR SINE MIR 17 121 -87 274 331 95 14 chr5 169088137 169088285 -30541865 + MER5A DNA MER1_type 7 166 -23 * 787 169 8 0 chr5 169088176 169088306 -30541844 - MER5A DNA MER1_type -45 144 14 513 322 62 31 chr5 169089327 169089585 -30540565 - MLT1L LTR MaLR 0 615 350 232 132 0 0 chr5 169089615 169089653 -30540497 - MLT1L LTR MaLR -537 78 41 400 275 66 24 chr5 169090035 169090202 -30539948 - L1ME3A LINE L1 -7 6163 5990 785 259 97 12 chr5 169090316 169090575 -30539575 - L1MC5 LINE L1 -435 7526 7246 1063 272 21 10 chr5 169090607 169090897 -30539253 - L1MC4 LINE L1 -1063 6979 6687 384 283 60 90 chr5 169091334 169091914 -30538236 - HAL1b LINE L1 -731 617 55 206 180 16 16 chr5 169091957 169092018 -30538132 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 2741 29 32 6 chr5 169092223 169092538 -30537612 + L1PA4 LINE L1 5832 6154 -1 225 0 0 0 chr5 169092698 169092723 -30537427 + (T)n Simple_repeat Simple_repeat 1 25 0 212 79 53 0 chr5 169093480 169093518 -30536632 + T-rich Low_complexity Low_complexity 5 44 0 317 309 18 18 chr5 169093623 169093733 -30536417 + MER117 DNA MER1_type 1 110 -87 390 232 79 47 chr5 169093733 169093932 -30536218 - MLT1L LTR MaLR 0 615 376 816 165 31 0 chr5 169093982 169094109 -30536041 - FLAM_C SINE Alu -2 131 1 268 348 11 0 chr5 169094361 169094450 -30535700 + MER117 DNA MER1_type 97 186 -11 341 287 11 0 chr5 169094553 169094640 -30535510 - MIR SINE MIR -60 148 61 357 109 0 0 chr5 169094822 169094877 -30535273 + (TCCCC)n Simple_repeat Simple_repeat 4 58 0 245 124 12 0 chr5 169094896 169094972 -30535178 - L1MB7 LINE L1 -6 6178 6071 482 286 12 58 chr5 169095086 169095327 -30534823 - MER102b DNA MER1_type -9 332 103 219 154 77 26 chr5 169095416 169095494 -30534656 + (CATTT)n Simple_repeat Simple_repeat 3 84 0 303 273 66 91 chr5 169095886 169095980 -30534170 - MIR SINE MIR -39 223 128 865 148 0 30 chr5 169095980 169096115 -30534035 + FLAM_C SINE Alu 1 131 -2 303 273 66 91 chr5 169096115 169096218 -30533932 - MIR SINE MIR -134 128 31 530 193 0 0 chr5 169096435 169096523 -30533627 - MLT1K LTR MaLR -8 580 493 1141 114 0 24 chr5 169096523 169096690 -30533460 + AluSc SINE Alu 144 306 -3 21 0 0 0 chr5 169097061 169097082 -30533068 + AT_rich Low_complexity Low_complexity 1 21 0 2482 186 79 18 chr5 169097910 169098508 -30531642 - L1MC4a LINE L1 -1 7807 7174 282 319 55 0 chr5 169098853 169098944 -30531206 - L2 LINE L2 -7 3265 3170 215 302 52 31 chr5 169100235 169100331 -30529819 - MIR3 SINE MIR -11 197 100 336 335 12 56 chr5 169100728 169100889 -30529261 + L2 LINE L2 3160 3313 0 184 194 97 65 chr5 169100888 169100950 -30529200 + MIR SINE MIR 104 167 -95 * 211 306 113 8 chr5 169101193 169101317 -30528833 - MIR3 SINE MIR -59 149 13 504 261 0 3 chr5 169101833 169101959 -30528191 + L1MC4 LINE L1 7482 7672 -204 4151 147 12 13 chr5 169101974 169102509 -30527641 + L1MB7 LINE L1 5478 6013 -171 2205 165 43 6 chr5 169102509 169102861 -30527289 - MLT1A1 LTR MaLR 0 365 1 4151 147 12 13 chr5 169102861 169103012 -30527138 + L1MB7 LINE L1 6013 6163 -21 2141 139 0 0 chr5 169103022 169103323 -30526827 + AluSx SINE Alu 1 301 -11 817 260 99 10 chr5 169103332 169103636 -30526514 + L1MC4 LINE L1 7707 8037 -5 364 273 124 87 chr5 169104933 169105381 -30524769 + L1ME4a LINE L1 5564 6035 -86 583 141 0 10 chr5 169105381 169105480 -30524670 - L1MD1 LINE L1 0 6242 6145 364 273 124 87 chr5 169105480 169105537 -30524613 + L1ME4a LINE L1 6035 6088 -33 1568 181 4 25 chr5 169105587 169105868 -30524282 + AluJo SINE Alu 3 277 -35 23 33 0 0 chr5 169106135 169106165 -30523985 + AT_rich Low_complexity Low_complexity 1 30 0 214 416 34 0 chr5 169106558 169106707 -30523443 + MIR3 SINE MIR 34 187 -21 879 114 0 30 chr5 169107847 169107978 -30522172 + FLAM_C SINE Alu 1 127 -16 1560 87 5 5 chr5 169108037 169108243 -30521907 - AluSc SINE Alu -70 239 34 2008 147 10 0 chr5 169109705 169110005 -30520145 + AluSx SINE Alu 1 303 -9 2136 108 3 0 chr5 169110198 169110484 -30519666 + AluSq SINE Alu 22 308 -5 438 184 104 24 chr5 169111659 169111784 -30518366 + MIR SINE MIR 120 254 -8 539 146 0 0 chr5 169111841 169111923 -30518227 - AluJo SINE Alu -20 292 211 310 154 107 141 chr5 169112586 169112735 -30517415 + L1ME4a LINE L1 5967 6110 -11 408 298 101 6 chr5 169113367 169113545 -30516605 + MIR SINE MIR 67 261 -1 185 237 40 26 chr5 169113579 169113655 -30516495 + MIR SINE MIR 63 139 -123 513 234 202 32 chr5 169113675 169113893 -30516257 + Charlie8 DNA MER1_type 1 255 -2162 305 354 8 31 chr5 169113984 169114114 -30516036 + MIR3 SINE MIR 30 156 -52 226 253 12 36 chr5 169114142 169114225 -30515925 - L2 LINE L2 -4 3268 3188 277 306 47 0 chr5 169114270 169114355 -30515795 + MER5C DNA MER1_type 36 124 -200 1862 222 149 28 chr5 169114469 169115000 -30515150 - MLT1G1 LTR MaLR 0 595 1 1903 214 167 74 chr5 169115011 169115609 -30514541 - MLT1E2 LTR MaLR 0 626 1 180 171 29 0 chr5 169115640 169115675 -30514475 + MER5C DNA MER1_type 288 323 -1 1627 207 77 75 chr5 169116012 169116533 -30513617 - MLT1H LTR MaLR -16 533 12 198 167 0 0 chr5 169117013 169117049 -30513101 + (TGGA)n Simple_repeat Simple_repeat 1 36 0 655 189 8 0 chr5 169117356 169117483 -30512667 + MER103 DNA DNA 8 135 -31 3604 186 44 23 chr5 169117537 169118264 -30511886 - L1MB4 LINE L1 0 6180 5470 242 29 29 0 chr5 169118264 169118299 -30511851 + (TTG)n Simple_repeat Simple_repeat 2 37 0 2367 91 3 0 chr5 169118299 169118595 -30511555 - AluSq SINE Alu -16 297 1 3604 186 44 23 chr5 169118595 169118635 -30511515 - L1MB4 LINE L1 -709 5471 5396 924 144 0 46 chr5 169118644 169118797 -30511353 - AluJo SINE Alu -83 229 84 4837 101 28 1 chr5 169118849 169119552 -30510598 + L1MA5 LINE L1 5576 6297 -3 2999 228 133 7 chr5 169119562 169120485 -30509665 - L1MB4 LINE L1 -902 5244 4205 188 362 21 0 chr5 169120486 169120580 -30509570 - MIR SINE MIR -108 154 59 1041 257 92 65 chr5 169120704 169120970 -30509180 - MLT1J LTR MaLR -52 459 175 1658 232 42 3 chr5 169120970 169121349 -30508801 - MSTD LTR MaLR -2 394 1 1041 257 92 65 chr5 169121349 169121529 -30508621 - MLT1J LTR MaLR -336 175 1 200 35 35 0 chr5 169121810 169121839 -30508311 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 1676 170 0 40 chr5 169122154 169122477 -30507673 + AluJo SINE Alu 1 310 -2 333 351 38 0 chr5 169122867 169122998 -30507152 + MER117 DNA MER1_type 7 142 -55 677 274 39 12 chr5 169123087 169123342 -30506808 - MIR SINE MIR 0 262 1 202 286 0 0 chr5 169123865 169123914 -30506236 + MIR SINE MIR 109 157 -105 275 331 153 11 chr5 169124612 169124971 -30505179 + L2 LINE L2 2560 2969 -345 317 270 14 0 chr5 169125178 169125252 -30504898 + L2 LINE L2 3155 3229 -43 186 133 0 0 chr5 169125288 169125318 -30504832 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 295 300 52 97 chr5 169126248 169126731 -30503419 + L2 LINE L2 2812 3272 0 282 171 0 0 chr5 169126884 169126954 -30503196 + (TG)n Simple_repeat Simple_repeat 1 70 0 315 0 0 0 chr5 169127402 169127437 -30502713 + (TG)n Simple_repeat Simple_repeat 2 36 0 181 259 107 45 chr5 169128190 169128302 -30501848 - MIR SINE MIR -25 237 119 273 293 151 0 chr5 169128401 169128507 -30501643 - L2 LINE L2 0 3313 3192 320 304 51 22 chr5 169128516 169128654 -30501496 + MIR3 SINE MIR 44 185 -23 * 408 291 0 54 chr5 169128640 169128788 -30501362 - MER5A DNA MER1_type -4 185 46 284 277 24 0 chr5 169128846 169128929 -30501221 + L2 LINE L2 3178 3262 -10 2036 123 9 63 chr5 169129085 169129402 -30500748 - AluSx SINE Alu -12 300 1 182 333 48 0 chr5 169129641 169129725 -30500425 - MIR SINE MIR -92 170 83 313 260 94 8 chr5 169129754 169129881 -30500269 + MIR3 SINE MIR 33 170 -38 618 174 174 13 chr5 169130332 169130487 -30499663 + MER5A DNA MER1_type 9 188 -1 534 191 114 100 chr5 169130799 169131019 -30499131 - MER102a DNA MER1_type -14 316 94 921 218 0 11 chr5 169131198 169131386 -30498764 - MER5A DNA MER1_type 0 189 4 180 0 0 0 chr5 169132588 169132608 -30497542 + (TA)n Simple_repeat Simple_repeat 2 21 0 939 156 122 119 chr5 169132948 169133051 -30497099 + MER33 DNA MER1_type 27 128 -2457 1616 170 25 4 chr5 169133051 169133327 -30496823 + AluJo SINE Alu 1 282 -30 939 156 122 119 chr5 169133327 169133518 -30496632 + MER33 DNA MER1_type 128 322 -2 201 286 127 48 chr5 169133563 169133689 -30496461 + L2 LINE L2 3137 3272 0 330 67 0 0 chr5 169133970 169134015 -30496135 + (TG)n Simple_repeat Simple_repeat 2 46 0 269 260 168 25 chr5 169134275 169134471 -30495679 - MIR SINE MIR 0 262 39 203 276 143 29 chr5 169134646 169134751 -30495399 + MIR SINE MIR 21 137 -71 1989 131 0 31 chr5 169135066 169135389 -30494761 - AluSx SINE Alu 0 314 1 412 300 95 21 chr5 169135510 169135753 -30494397 - MIR SINE MIR 0 262 2 344 300 173 23 chr5 169137520 169137740 -30492410 - MIR SINE MIR -8 254 2 786 216 45 0 chr5 169137801 169137977 -30492173 - MER5A DNA MER1_type -5 184 1 970 241 39 35 chr5 169138077 169138131 -30492019 - MIR SINE MIR 0 262 210 1186 155 11 0 chr5 169138131 169138318 -30491832 + MER5A DNA MER1_type 1 189 0 970 241 39 35 chr5 169138318 169138520 -30491630 - MIR SINE MIR -52 210 5 216 258 0 45 chr5 169138623 169138689 -30491461 - MIR SINE MIR -70 192 130 2057 148 0 3 chr5 169138825 169139129 -30491021 - AluJo SINE Alu -9 303 1 566 268 67 6 chr5 169139364 169139528 -30490622 + MER5B DNA MER1_type 5 178 0 240 320 40 101 chr5 169139601 169139979 -30490171 - L2 LINE L2 -1 3271 2917 680 246 146 4 chr5 169140128 169140368 -30489782 + Charlie4a DNA MER1_type 28 301 -207 693 191 0 0 chr5 169140387 169140523 -30489627 - L1MA3 LINE L1 -1 6304 6169 864 118 0 0 chr5 169140548 169140667 -30489483 - FLAM_A SINE Alu -4 138 20 573 217 60 12 chr5 169140675 169140841 -30489309 + Charlie4a DNA MER1_type 335 508 0 6727 225 74 23 chr5 169142053 169144015 -30486135 + L1MEc LINE L1 49 1910 -4305 1564 211 30 10 chr5 169144015 169144318 -30485832 + AluJo SINE Alu 3 311 -1 6727 225 74 23 chr5 169144318 169144729 -30485421 + L1MEc LINE L1 1910 2299 -3916 2217 125 0 0 chr5 169144729 169145033 -30485117 + AluSx SINE Alu 1 304 -8 6727 225 74 23 chr5 169145033 169145740 -30484410 + L1MEc LINE L1 2299 3268 -2947 857 202 21 16 chr5 169145715 169145958 -30484192 + L1MEc LINE L1 2542 2785 -3430 * 1914 246 22 4 chr5 169145958 169146321 -30483829 + L1MEc LINE L1 3276 3652 -2563 2531 58 0 35 chr5 169146321 169146634 -30483516 + AluY SINE Alu 1 302 -9 1914 246 22 4 chr5 169146634 169146774 -30483376 + L1MEc LINE L1 3652 3788 -2427 254 164 148 0 chr5 169146914 169146975 -30483175 + L1MEc LINE L1 1566 1635 -4761 313 236 67 0 chr5 169147077 169147166 -30482984 + L1MEc LINE L1 1767 1861 -4535 2045 243 85 28 chr5 169147830 169148829 -30481321 - L2 LINE L2 0 3313 2279 324 64 0 0 chr5 169149427 169149474 -30480676 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2232 90 7 14 chr5 169149476 169149765 -30480385 - AluSx SINE Alu -25 287 1 294 347 87 0 chr5 169150385 169150535 -30479615 - MIR SINE MIR -80 182 20 1988 152 3 3 chr5 169150607 169150903 -30479247 - AluSx SINE Alu -14 298 3 303 282 205 0 chr5 169151529 169151724 -30478426 - L1ME4a LINE L1 -234 5887 5653 2158 116 14 3 chr5 169152020 169152313 -30477837 + AluSx SINE Alu 1 296 -16 458 285 81 6 chr5 169153100 169153272 -30476878 - MIR SINE MIR -30 232 48 278 266 73 24 chr5 169153397 169153521 -30476629 + MIR3 SINE MIR 78 207 -1 262 200 77 0 chr5 169154912 169154977 -30475173 - MIR SINE MIR -119 143 74 358 273 39 31 chr5 169155615 169155743 -30474407 + L2 LINE L2 3144 3272 0 504 256 110 26 chr5 169155997 169156188 -30473962 - MIR SINE MIR -54 208 2 1255 220 54 22 chr5 169156699 169157013 -30473137 - MLT1K LTR MaLR -3 585 262 25 31 0 0 chr5 169157426 169157458 -30472692 + AT_rich Low_complexity Low_complexity 1 32 0 598 288 44 0 chr5 169157464 169157669 -30472481 + MIR SINE MIR 49 262 0 226 228 53 18 chr5 169157682 169157796 -30472354 - L1MC/D LINE L1 -1979 5829 5712 32 0 0 0 chr5 169158414 169158446 -30471704 + AT_rich Low_complexity Low_complexity 1 32 0 237 185 20 0 chr5 169158470 169158525 -30471625 + MIR SINE MIR 96 146 -62 226 222 14 14 chr5 169160018 169160090 -30470060 - L1MC4 LINE L1 -2 8040 7969 1612 160 19 64 chr5 169160304 169160617 -30469533 - AluJb SINE Alu -13 299 1 521 266 82 6 chr5 169160794 169160952 -30469198 - Charlie8 DNA MER1_type -2159 258 89 1610 210 112 81 chr5 169160993 169161598 -30468552 - MLT1E2 LTR MaLR 0 626 3 448 175 279 7 chr5 169161909 169162063 -30468087 - L2 LINE L2 0 3313 3118 526 130 0 0 chr5 169162087 169162164 -30467986 - MER58 DNA MER1_type -1 2419 2343 1084 189 0 0 chr5 169162203 169162378 -30467772 + AluJo SINE Alu 121 295 -17 416 181 60 24 chr5 169162378 169162461 -30467689 - MER58 DNA MER1_type -255 86 1 306 310 77 7 chr5 169163026 169163181 -30466969 + MIR SINE MIR 8 173 -89 637 280 133 26 chr5 169163227 169163573 -30466577 + LTR16A LTR ERVL 59 441 -9 751 174 20 20 chr5 169163607 169163756 -30466394 - MER5A DNA MER1_type -1 188 40 322 233 96 34 chr5 169163629 169163775 -30466375 + MER5A DNA MER1_type 35 189 0 * 25 0 0 0 chr5 169164045 169164070 -30466080 + AT_rich Low_complexity Low_complexity 1 25 0 4404 186 40 19 chr5 169164383 169165902 -30464248 + L1MB7 LINE L1 3657 6166 -18 1379 133 14 14 chr5 169166010 169166228 -30463922 + AluJb SINE Alu 84 301 -11 2738 239 64 54 chr5 169166245 169167280 -30462870 + L1MC5 LINE L1 6637 7681 -280 2081 164 116 32 chr5 169167446 169168144 -30462006 - MER21B LTR ERV1 -2 861 19 402 139 20 129 chr5 169168166 169168267 -30461883 - MER21B LTR ERV1 -773 90 1 199 277 62 0 chr5 169168860 169168925 -30461225 - MIR SINE MIR -52 210 142 319 217 189 75 chr5 169169063 169169344 -30460806 - MLT1J LTR MaLR -112 399 87 455 226 57 8 chr5 169169421 169169545 -30460605 - MIR SINE MIR -119 143 14 453 19 0 0 chr5 169169902 169169956 -30460194 + (TG)n Simple_repeat Simple_repeat 2 55 0 296 248 120 26 chr5 169170109 169170226 -30459924 + L2 LINE L2 3136 3263 -9 764 203 10 36 chr5 169170417 169170609 -30459541 + MIR SINE MIR 58 244 -18 195 282 155 0 chr5 169170891 169170994 -30459156 - MIR SINE MIR -60 202 84 340 327 0 0 chr5 169172205 169172318 -30457832 - MIR3 SINE MIR -51 157 45 198 357 28 28 chr5 169174416 169174559 -30455591 - L2 LINE L2 -220 3052 2910 315 194 16 0 chr5 169174641 169174703 -30455447 - L1MC1 LINE L1 0 6333 6271 274 167 0 0 chr5 169174708 169174750 -30455400 + 5S rRNA rRNA 1 42 -79 5849 120 10 9 chr5 169174762 169175636 -30454514 - L1MC1 LINE L1 -106 6227 5353 365 292 77 0 chr5 169175938 169176068 -30454082 - MIR SINE MIR -105 157 18 330 333 0 18 chr5 169176661 169176829 -30453321 + (CCA)n Simple_repeat Simple_repeat 1 165 0 539 125 0 0 chr5 169179039 169179119 -30451031 + MADE1 DNA Mariner 1 80 0 273 187 0 80 chr5 169179264 169179339 -30450811 - MIR SINE MIR 0 262 194 25 51 0 0 chr5 169179918 169179957 -30450193 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 169180270 169180292 -30449858 + AT_rich Low_complexity Low_complexity 1 22 0 259 271 79 36 chr5 169180842 169180982 -30449168 + MLT1K LTR MaLR 413 558 -30 519 303 13 7 chr5 169181389 169181541 -30448609 - MER5A DNA MER1_type 0 189 37 412 311 44 11 chr5 169182046 169182229 -30447921 - MER5A DNA MER1_type 0 189 1 236 274 71 0 chr5 169182299 169182383 -30447767 - MIR SINE MIR -56 152 63 2414 96 0 13 chr5 169183203 169183515 -30446635 - AluSg SINE Alu -2 308 1 2880 123 32 4 chr5 169184167 169184631 -30445519 - L1MA9 LINE L1 -13 6299 5823 1950 137 0 35 chr5 169184634 169184948 -30445202 - AluJb SINE Alu -6 306 4 21 0 0 0 chr5 169184950 169184971 -30445179 + AT_rich Low_complexity Low_complexity 1 21 0 991 104 0 8 chr5 169184971 169185105 -30445045 - AluJb SINE Alu -179 133 1 1799 111 15 11 chr5 169185105 169185137 -30445013 - L1MA9 LINE L1 -484 5828 5798 258 32 0 0 chr5 169185137 169185168 -30444982 + (TG)n Simple_repeat Simple_repeat 1 31 0 1799 111 15 11 chr5 169185168 169185405 -30444745 - L1MA9 LINE L1 -514 5798 5558 310 208 192 0 chr5 169185822 169185947 -30444203 + MIR SINE MIR 87 235 -27 2005 141 7 0 chr5 169186375 169186659 -30443491 - AluJo SINE Alu -18 294 9 471 290 93 25 chr5 169187610 169187772 -30442378 + MIR3 SINE MIR 34 206 -2 30 0 0 0 chr5 169188106 169188136 -30442014 + AT_rich Low_complexity Low_complexity 1 30 0 180 220 17 34 chr5 169188167 169188226 -30441924 - L2 LINE L2 -335 2978 2921 2205 139 3 0 chr5 169188434 169188743 -30441407 + 7SLRNA srpRNA srpRNA 2 311 -9 908 177 149 0 chr5 169188895 169189076 -30441074 - MER3 DNA MER1_type 0 209 2 394 132 15 0 chr5 169189128 169189196 -30440954 + MER41A LTR ERV1 400 468 -86 758 254 92 53 chr5 169189360 169189583 -30440567 + L1ME4a LINE L1 5506 5746 -375 830 212 88 5 chr5 169189583 169189776 -30440374 + MER63A DNA MER1_type 1 209 -1 758 254 92 53 chr5 169189776 169189855 -30440295 + L1ME4a LINE L1 5746 5820 -301 748 181 20 7 chr5 169189866 169190015 -30440135 - MER5A DNA MER1_type 0 189 39 544 307 67 17 chr5 169190100 169190338 -30439812 - MIR SINE MIR 0 262 13 435 213 102 8 chr5 169190405 169190532 -30439618 + L1ME4a LINE L1 5981 6119 -2 345 303 25 34 chr5 169190717 169190836 -30439314 - MIR SINE MIR -67 195 78 400 269 127 25 chr5 169190907 169191104 -30439046 - MIR SINE MIR -3 259 43 667 257 22 0 chr5 169191399 169191578 -30438572 - MIR SINE MIR -21 241 59 301 277 12 0 chr5 169192574 169192657 -30437493 - L2 LINE L2 -20 3252 3169 200 300 88 0 chr5 169192932 169193012 -30437138 + L2 LINE L2 3227 3313 0 299 269 13 96 chr5 169194817 169194973 -30435177 - MIR3 SINE MIR -65 143 1 239 296 76 35 chr5 169195400 169195572 -30434578 + MIR3 SINE MIR 1 179 -29 342 164 75 0 chr5 169196375 169196442 -30433708 + L1ME4a LINE L1 5984 6055 -66 240 246 215 15 chr5 169196577 169196707 -30433443 + Charlie8 DNA MER1_type 42 197 -2220 341 256 53 45 chr5 169197384 169197517 -30432633 - MIR SINE MIR -32 230 97 195 184 0 0 chr5 169198542 169198580 -30431570 + A-rich Low_complexity Low_complexity 1 38 0 848 292 29 39 chr5 169198886 169199173 -30430977 + L1ME4a LINE L1 5533 5814 -307 2438 94 0 3 chr5 169199173 169199482 -30430668 + AluSq SINE Alu 1 308 -5 848 292 29 39 chr5 169199482 169199684 -30430466 + L1ME4a LINE L1 5814 6017 -104 738 294 63 4 chr5 169200256 169200494 -30429656 + MIR SINE MIR 8 259 -3 603 361 22 7 chr5 169201641 169201915 -30428235 - L3 LINE CR1 -5 1572 1295 261 0 0 0 chr5 169202498 169202527 -30427623 + (A)n Simple_repeat Simple_repeat 1 29 0 186 39 0 0 chr5 169202585 169202611 -30427539 + L2 LINE L2 2923 2948 -365 1365 239 119 7 chr5 169204984 169205411 -30424739 + MER20B DNA MER1_type 309 783 0 22 0 0 0 chr5 169205439 169205461 -30424689 + AT_rich Low_complexity Low_complexity 1 22 0 255 293 37 61 chr5 169205932 169205999 -30424151 + MER5A DNA MER1_type 26 93 -96 676 207 92 72 chr5 169205999 169206250 -30423900 - MER112 DNA MER1_type 0 256 1 255 293 37 61 chr5 169206250 169206346 -30423804 + MER5A DNA MER1_type 93 185 -4 2362 80 0 13 chr5 169206578 169206878 -30423272 + AluY SINE Alu 1 296 -15 835 212 50 11 chr5 169207046 169207225 -30422925 - MER5A DNA MER1_type -3 186 1 242 196 36 18 chr5 169207247 169207303 -30422847 + L2 LINE L2 3211 3267 -5 454 96 0 27 chr5 169207390 169207463 -30422687 + L1MB8 LINE L1 6108 6178 0 193 233 0 0 chr5 169207589 169207632 -30422518 + MIR3 SINE MIR 155 197 -11 344 303 43 71 chr5 169207936 169208111 -30422039 + MIR SINE MIR 15 182 -80 2201 131 0 13 chr5 169208111 169208423 -30421727 + AluSx SINE Alu 1 308 -4 344 303 43 71 chr5 169208423 169208501 -30421649 + MIR SINE MIR 182 261 -1 239 312 129 53 chr5 169209052 169209222 -30420928 + MIR SINE MIR 10 192 -70 426 283 65 85 chr5 169209251 169209848 -30420302 - L2 LINE L2 -51 3221 2652 2033 184 69 5 chr5 169209976 169210411 -30419739 - MLT1C LTR MaLR -4 463 1 234 0 0 0 chr5 169210533 169210543 -30419607 + (TG)n Simple_repeat Simple_repeat 1 36 0 234 0 0 0 chr5 169210543 169210569 -30419581 + (TG)n Simple_repeat Simple_repeat 2 27 0 330 289 83 2 chr5 169210613 169210750 -30419400 + MIR SINE MIR 17 164 -60 945 231 52 16 chr5 169211092 169211343 -30418807 + MIR SINE MIR 3 262 0 606 239 62 58 chr5 169211459 169211718 -30418432 - LTR16C LTR ERVL -2 489 230 228 288 72 40 chr5 169211854 169211979 -30418171 - L3 LINE CR1 -72 1505 1377 338 296 37 0 chr5 169212083 169212218 -30417932 - MER117 DNA MER1_type -57 140 1 267 342 45 18 chr5 169212266 169212377 -30417773 + MIR3 SINE MIR 46 159 -49 199 244 0 0 chr5 169212652 169212693 -30417457 + MIR3 SINE MIR 165 205 -3 213 39 0 0 chr5 169213486 169213512 -30416638 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 830 153 30 0 chr5 169213512 169213637 -30416513 - AluJb SINE Alu -30 282 154 814 243 116 48 chr5 169213677 169214117 -30416033 - MER113 DNA MER1_type? -49 472 3 590 242 62 0 chr5 169214177 169214338 -30415812 - L1M4 LINE L1 -1964 4182 4012 1225 273 59 58 chr5 169214472 169215028 -30415122 - MLT1K LTR MaLR -31 557 1 193 286 0 48 chr5 169215071 169215134 -30415016 + MIR SINE MIR 100 159 -103 442 224 47 0 chr5 169215635 169215720 -30414430 - MIR3 SINE MIR -39 169 81 199 274 246 17 chr5 169215863 169216038 -30414112 - MIR SINE MIR -28 234 20 960 178 29 0 chr5 169216440 169216614 -30413536 - MER5A DNA MER1_type -10 179 1 258 32 0 0 chr5 169217323 169217354 -30412796 + (CAT)n Simple_repeat Simple_repeat 2 32 0 247 247 21 86 chr5 169217387 169217480 -30412670 - MIR SINE MIR -65 197 111 641 318 9 23 chr5 169217552 169217766 -30412384 - MIR SINE MIR -19 243 33 361 273 80 23 chr5 169217946 169218108 -30412042 - MER5B DNA MER1_type -4 174 16 459 234 83 95 chr5 169218130 169218382 -30411768 + MER112 DNA MER1_type 1 249 -11 437 269 88 56 chr5 169218685 169218901 -30411249 - L3 LINE CR1 -2 1575 1353 336 320 70 35 chr5 169219122 169219294 -30410856 - MIR SINE MIR -38 224 47 410 272 99 0 chr5 169219936 169220098 -30410052 - MIR SINE MIR 0 262 85 251 198 125 31 chr5 169220236 169220332 -30409818 - MIR3 SINE MIR 0 208 104 2315 149 17 94 chr5 169220515 169221045 -30409105 - MLT1D LTR MaLR 0 505 17 205 265 36 12 chr5 169221202 169221285 -30408865 - L2 LINE L2 -337 2935 2851 265 257 162 29 chr5 169221596 169221701 -30408449 - MIR SINE MIR -61 147 32 187 221 338 0 chr5 169221807 169221875 -30408275 - MIR SINE MIR -107 155 65 187 180 50 170 chr5 169221890 169221945 -30408205 + MIR3 SINE MIR 113 152 -56 688 243 53 0 chr5 169221945 169222114 -30408036 + MER5B DNA MER1_type 1 178 0 187 180 50 170 chr5 169222114 169222158 -30407992 + MIR3 SINE MIR 152 200 -8 192 308 126 42 chr5 169222298 169222441 -30407709 + MIR SINE MIR 1 155 -107 2714 109 5 8 chr5 169222859 169223235 -30406915 - THE1C LTR MaLR 0 375 1 203 273 21 97 chr5 169223244 169223309 -30406841 - MIR SINE MIR -58 150 127 1345 191 90 7 chr5 169223309 169223608 -30406542 - MER33 DNA MER1_type 0 324 1 203 273 21 97 chr5 169223608 169223700 -30406450 - MIR SINE MIR -81 127 30 631 324 54 12 chr5 169223746 169223987 -30406163 + MIR SINE MIR 2 252 -10 294 294 18 34 chr5 169224831 169224964 -30405186 - MER5A DNA MER1_type -41 148 8 794 292 9 5 chr5 169225918 169226134 -30404016 + MIR SINE MIR 46 262 0 622 261 24 39 chr5 169226518 169226725 -30403425 + MIR SINE MIR 9 212 -50 2177 111 47 0 chr5 169226900 169227197 -30402953 - AluSq SINE Alu -2 311 1 597 294 90 20 chr5 169227412 169227613 -30402537 - MIR SINE MIR -37 225 11 610 146 0 19 chr5 169227813 169227916 -30402234 + FLAM_C SINE Alu 42 142 -1 344 164 0 14 chr5 169227916 169227989 -30402161 + GA-rich Low_complexity Low_complexity 1 72 0 393 232 9 36 chr5 169227993 169228105 -30402045 + MER117 DNA MER1_type 9 117 -80 41 78 0 0 chr5 169228212 169228302 -30401848 + AT_rich Low_complexity Low_complexity 1 90 0 1723 122 0 0 chr5 169228380 169228609 -30401541 + AluSg/x SINE Alu 74 302 -8 30 89 0 0 chr5 169228736 169228815 -30401335 + AT_rich Low_complexity Low_complexity 1 79 0 2859 160 69 2 chr5 169229130 169229610 -30400540 + LTR64 LTR ERVK 2 513 0 659 260 74 41 chr5 169230628 169231094 -30399056 - MLT1K LTR MaLR 0 588 2 200 244 189 22 chr5 169231143 169231233 -30398917 + L2 LINE L2 2921 3025 -247 230 267 178 11 chr5 169231283 169231373 -30398777 + L2 LINE L2 3155 3259 -13 385 334 117 2 chr5 169231800 169232042 -30398108 + L1ME LINE L1 5540 5747 -374 189 0 0 0 chr5 169232063 169232084 -30398066 + (A)n Simple_repeat Simple_repeat 1 21 0 1762 175 0 3 chr5 169232088 169232379 -30397771 - AluJo SINE Alu -22 290 1 1698 185 3 35 chr5 169232556 169232875 -30397275 + AluJo SINE Alu 1 309 -3 21 0 0 0 chr5 169233322 169233343 -30396807 + AT_rich Low_complexity Low_complexity 1 21 0 268 282 18 18 chr5 169233459 169233569 -30396581 - MIR3 SINE MIR -88 120 11 371 345 55 0 chr5 169234111 169234256 -30395894 + MIR SINE MIR 107 259 -3 583 286 69 12 chr5 169234282 169234527 -30395623 + MIR SINE MIR 2 260 -2 884 209 28 0 chr5 169234801 169234983 -30395167 + MER5A DNA MER1_type 1 187 -2 273 29 0 0 chr5 169235203 169235237 -30394913 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 387 212 85 109 chr5 169235557 169235722 -30394428 + MIR SINE MIR 47 207 -55 2309 105 0 0 chr5 169235850 169236146 -30394004 + AluSx SINE Alu 1 296 -16 484 236 185 6 chr5 169236434 169236612 -30393538 - MIR SINE MIR -47 215 6 190 351 108 0 chr5 169237808 169237882 -30392268 + MIR SINE MIR 65 146 -62 405 340 115 0 chr5 169237973 169238182 -30391968 - MIR SINE MIR -3 259 27 320 346 10 0 chr5 169238717 169238821 -30391329 - L2 LINE L2 -23 3249 3145 1732 182 20 3 chr5 169238866 169239163 -30390987 + AluJo SINE Alu 1 302 -10 316 254 99 28 chr5 169239226 169239368 -30390782 - MLT1K LTR MaLR -107 481 330 233 214 71 0 chr5 169239709 169239779 -30390371 - L2 LINE L2 -222 3050 2976 524 295 159 11 chr5 169240953 169241410 -30388740 + L2 LINE L2 2527 3055 -258 1621 231 88 18 chr5 169241508 169242005 -30388145 - MLT1F LTR MaLR -2 540 9 505 254 170 6 chr5 169242035 169242200 -30387950 - MIR SINE MIR -25 237 46 272 249 10 15 chr5 169242190 169242279 -30387871 - MIR SINE MIR -81 127 40 * 269 244 37 12 chr5 169242619 169242701 -30387449 - MER117 DNA MER1_type -53 144 61 738 269 67 13 chr5 169242701 169242939 -30387211 + MIR SINE MIR 12 262 0 357 352 28 0 chr5 169243372 169243514 -30386636 + MIR SINE MIR 54 199 -63 1098 140 30 0 chr5 169244692 169244856 -30385294 + AluJb SINE Alu 121 289 -23 213 39 0 0 chr5 169244858 169244884 -30385266 + (TTG)n Simple_repeat Simple_repeat 2 27 0 237 255 324 14 chr5 169245010 169245155 -30384995 - MIR SINE MIR -35 227 38 2295 102 0 0 chr5 169245520 169245815 -30384335 + AluSx SINE Alu 1 295 -17 213 313 0 0 chr5 169246314 169246381 -30383769 + L3 LINE CR1 790 856 -721 1088 155 167 16 chr5 169246978 169247229 -30382921 + MER58B DNA MER1_type 42 330 -11 1282 246 101 50 chr5 169247786 169248340 -30381810 - MLT1K LTR MaLR -4 584 3 2844 206 51 23 chr5 169248782 169249259 -30380891 - MER45B DNA AcHobo -541 1040 537 1720 149 3 52 chr5 169249259 169249567 -30380583 + AluJo SINE Alu 1 293 -19 2844 206 51 23 chr5 169249567 169249775 -30380375 - MER45B DNA AcHobo -1044 537 336 925 171 45 0 chr5 169249814 169249990 -30380160 - MER45B DNA AcHobo -849 191 8 621 239 236 46 chr5 169250134 169250595 -30379555 - MLT1K LTR MaLR -33 555 7 1272 265 121 2 chr5 169250753 169251168 -30378982 - LTR16B LTR ERVL 0 464 1 240 274 0 0 chr5 169251235 169251286 -30378864 + L2 LINE L2 3252 3302 -11 245 339 142 0 chr5 169251499 169251626 -30378524 + MER5A DNA MER1_type 6 150 -39 312 287 21 0 chr5 169252199 169252293 -30377857 - MLT1K LTR MaLR -3 585 490 256 289 0 13 chr5 169252323 169252399 -30377751 - MLT1K LTR MaLR -183 405 331 419 227 118 0 chr5 169252653 169252763 -30377387 + FRAM SINE Alu 13 135 -41 2820 197 125 38 chr5 169252765 169253778 -30376372 + L1ME1 LINE L1 5072 6177 -1 2221 120 3 0 chr5 169253850 169254151 -30375999 + AluSq SINE Alu 4 305 -8 406 223 57 85 chr5 169254228 169254347 -30375803 + L1MC5 LINE L1 7721 7833 -128 1926 128 35 7 chr5 169254347 169254635 -30375515 - AluSx SINE Alu -16 296 1 406 223 57 85 chr5 169254635 169254726 -30375424 + L1MC5 LINE L1 7833 7925 -36 409 208 62 0 chr5 169255058 169255154 -30374996 - Charlie8 DNA MER1_type -2255 162 61 2249 115 23 0 chr5 169255163 169255468 -30374682 + AluSx SINE Alu 1 312 0 366 23 0 0 chr5 169255481 169255524 -30374626 + (CA)n Simple_repeat Simple_repeat 1 43 0 596 207 41 6 chr5 169255552 169255721 -30374429 - MLT1J2 LTR MaLR -266 184 10 410 196 45 30 chr5 169260229 169260362 -30369788 - L2 LINE L2 -296 3017 2883 1795 163 14 3 chr5 169260452 169260741 -30369409 - AluJo SINE Alu -20 292 1 187 248 194 8 chr5 169260837 169260966 -30369184 + MIR3 SINE MIR 55 207 -1 270 231 0 0 chr5 169261301 169261353 -30368797 - L2 LINE L2 -6 3307 3256 1240 258 75 17 chr5 169261546 169261891 -30368259 - LTR33 LTR ERVL -30 491 127 4137 200 42 54 chr5 169261898 169263532 -30366618 + L1MEc LINE L1 1760 3329 -2886 2876 208 52 49 chr5 169263527 169263592 -30366558 + L1M4 LINE L1 4316 4379 -1767 * 1824 173 10 7 chr5 169263592 169263899 -30366251 + AluJo SINE Alu 1 308 -4 2876 208 52 49 chr5 169263899 169264117 -30366033 + L1M4 LINE L1 4379 4595 -1551 2162 122 0 0 chr5 169264117 169264412 -30365738 + AluSx SINE Alu 1 295 -17 2876 208 52 49 chr5 169264412 169264720 -30365430 + L1M4 LINE L1 4595 4914 -1232 2228 110 0 10 chr5 169264720 169265019 -30365131 + AluSx SINE Alu 1 296 -16 2876 208 52 49 chr5 169265019 169265267 -30364883 + L1M4 LINE L1 4914 5160 -986 216 120 87 76 chr5 169265281 169265307 -30364843 + (TTAAA)n Simple_repeat Simple_repeat 5 29 -68 2141 113 0 3 chr5 169265307 169265629 -30364521 - AluSc SINE Alu 0 321 1 216 120 87 76 chr5 169265629 169265693 -30364457 + (TTAAA)n Simple_repeat Simple_repeat 29 97 0 439 159 103 129 chr5 169265695 169265762 -30364388 + L1M4 LINE L1 5128 5195 -951 2176 142 0 0 chr5 169265762 169266072 -30364078 + AluSx SINE Alu 1 310 -2 439 159 103 129 chr5 169266072 169266237 -30363913 + L1M4 LINE L1 5195 5354 -792 * 2516 175 20 2 chr5 169266224 169266554 -30363596 + L1PB4 LINE L1 4835 5158 -998 2464 87 0 0 chr5 169266554 169266864 -30363286 + AluSg SINE Alu 1 310 0 2516 175 20 2 chr5 169266864 169267267 -30362883 + L1PB4 LINE L1 5158 5581 -575 237 210 50 36 chr5 169267288 169267400 -30362750 + L1MC4 LINE L1 6614 6710 -1332 1686 179 13 57 chr5 169267406 169267791 -30362359 + L1PB4 LINE L1 5785 6152 -4 703 75 0 0 chr5 169267805 169267898 -30362252 + L1MB7 LINE L1 6069 6161 -23 2026 100 35 0 chr5 169267909 169268169 -30361981 - AluSx SINE Alu -30 282 14 21 0 0 0 chr5 169268180 169268201 -30361949 + AT_rich Low_complexity Low_complexity 1 21 0 374 287 122 24 chr5 169268474 169268721 -30361429 - L2 LINE L2 -338 2976 2706 234 0 0 0 chr5 169269018 169269044 -30361106 + (TGG)n Simple_repeat Simple_repeat 3 28 0 203 234 0 0 chr5 169269148 169269195 -30360955 + L2 LINE L2 3267 3313 0 386 266 96 11 chr5 169270467 169270655 -30359495 + L2 LINE L2 2934 3137 -176 2926 167 18 4 chr5 169270663 169271165 -30358985 + MER82 DNA MER2_type 1 509 -144 1766 169 58 9 chr5 169271167 169271493 -30358657 - MLT1A1 LTR MaLR -14 351 10 1705 184 11 0 chr5 169271580 169271863 -30358287 + AluJo SINE Alu 1 286 -26 2394 88 0 0 chr5 169271897 169272194 -30357956 - AluSx SINE Alu -15 297 1 328 160 53 13 chr5 169272197 169272272 -30357878 + MER82 DNA MER2_type 570 647 -6 218 268 113 0 chr5 169272328 169272399 -30357751 + L2 LINE L2 3142 3220 -52 759 279 130 6 chr5 169272781 169273097 -30357053 - Tigger8 DNA MER2_type -2 664 310 4747 150 26 47 chr5 169273109 169273684 -30356466 - L1MB8 LINE L1 -12 6166 5617 2204 103 21 0 chr5 169273684 169273974 -30356176 + AluSq SINE Alu 1 296 -17 4747 150 26 47 chr5 169273974 169274331 -30355819 - L1MB8 LINE L1 -561 5617 5254 1865 129 3 62 chr5 169274419 169274728 -30355422 + MER1B DNA MER1_type 49 339 0 331 140 0 0 chr5 169274732 169274789 -30355361 - L1MB8 LINE L1 -904 5242 5186 512 289 128 16 chr5 169274790 169275039 -30355111 - Tigger8 DNA MER2_type -342 324 48 867 247 53 8 chr5 169275039 169275282 -30354868 - MIR SINE MIR -2 260 7 230 263 0 0 chr5 169275697 169275754 -30354396 - L1ME LINE L1 -244 5926 5870 697 279 108 51 chr5 169275793 169276183 -30353967 - L2 LINE L2 -15 3298 2887 1683 165 0 34 chr5 169276192 169276513 -30353637 + AluJo SINE Alu 1 311 0 1801 158 14 3 chr5 169276513 169276804 -30353346 + AluJo SINE Alu 2 295 -17 223 289 22 82 chr5 169276934 169277069 -30353081 - L2 LINE L2 -667 2647 2521 2348 81 0 0 chr5 169277082 169277366 -30352784 + AluSc SINE Alu 1 284 -25 231 36 0 0 chr5 169277369 169277397 -30352753 + (GAAA)n Simple_repeat Simple_repeat 1 28 0 292 173 0 0 chr5 169277563 169277615 -30352535 - L2 LINE L2 -1036 2278 2227 304 256 17 127 chr5 169278861 169279048 -30351102 - MER5A DNA MER1_type -7 182 5 2227 110 3 0 chr5 169279150 169279442 -30350708 + AluSx SINE Alu 7 299 -13 278 30 0 0 chr5 169279521 169279554 -30350596 - MLT2C2 LTR ERVL -3 461 429 1065 235 147 52 chr5 169279609 169280073 -30350077 + MLT1J LTR MaLR 1 508 -3 860 244 39 27 chr5 169280082 169280340 -30349810 - MIR SINE MIR 0 262 2 248 232 274 11 chr5 169280379 169280474 -30349676 - L2 LINE L2 0 3272 3153 2724 85 24 34 chr5 169280483 169280898 -30349252 + MER4A LTR ERV1 1 527 -172 2317 89 13 0 chr5 169280898 169281202 -30348948 + MER4A LTR ERV1 355 662 -2 234 250 0 0 chr5 169281901 169281953 -30348197 - MIR SINE MIR -1 261 210 2454 84 3 0 chr5 169282211 169282521 -30347629 + AluSp SINE Alu 1 311 -2 180 0 0 0 chr5 169282558 169282578 -30347572 + (CA)n Simple_repeat Simple_repeat 1 20 0 711 147 13 168 chr5 169282600 169282832 -30347318 - LTR41 LTR ERVL -8 765 570 339 244 62 118 chr5 169283214 169283715 -30346435 - L1ME4a LINE L1 -53 6068 5596 25 51 0 0 chr5 169285019 169285058 -30345092 + GC_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr5 169285648 169285684 -30344466 + GC_rich Low_complexity Low_complexity 1 36 0 2464 96 0 0 chr5 169286971 169287283 -30342867 - AluSx SINE Alu 0 312 1 322 203 23 105 chr5 169288347 169288480 -30341670 + MIR3 SINE MIR 82 203 -5 213 232 147 32 chr5 169290358 169290453 -30339697 - MIR3 SINE MIR 0 208 103 863 226 23 23 chr5 169290740 169290957 -30339193 - MER20 DNA MER1_type -2 217 1 375 288 16 32 chr5 169292685 169292810 -30337340 - MIR SINE MIR -62 146 24 1484 202 35 3 chr5 169292841 169293128 -30337022 - AluJb SINE Alu -16 296 1 257 225 157 0 chr5 169293437 169293526 -30336624 - L1ME4a LINE L1 -53 6068 5966 2030 142 7 0 chr5 169293932 169294228 -30335922 - AluSx SINE Alu -14 298 1 1709 163 53 3 chr5 169294236 169294519 -30335631 - AluJb SINE Alu -15 297 1 187 271 0 0 chr5 169295550 169295598 -30334552 + L2 LINE L2 3264 3311 -2 23 0 0 0 chr5 169296710 169296733 -30333417 + AT_rich Low_complexity Low_complexity 1 23 0 482 264 183 24 chr5 169298216 169298462 -30331688 - L3 LINE CR1 -2 1575 1291 435 213 102 8 chr5 169299011 169299138 -30331012 - L1ME4a LINE L1 -2 6119 5981 531 311 67 17 chr5 169299205 169299443 -30330707 + MIR SINE MIR 13 262 0 648 187 13 39 chr5 169299531 169299686 -30330464 + MER5A DNA MER1_type 39 189 0 752 254 92 53 chr5 169299697 169299776 -30330374 - L1ME4a LINE L1 -301 5820 5746 830 212 88 5 chr5 169299776 169299969 -30330181 - MER63A DNA MER1_type -1 209 1 752 254 92 53 chr5 169299969 169300192 -30329958 - L1ME4a LINE L1 -375 5746 5506 394 132 15 0 chr5 169300356 169300424 -30329726 - MER41B LTR ERV1 -86 549 481 921 176 148 0 chr5 169300475 169300657 -30329493 + MER3 DNA MER1_type 1 209 0 2183 142 3 0 chr5 169300809 169301118 -30329032 - 7SLRNA srpRNA srpRNA -9 311 2 180 220 17 34 chr5 169301326 169301385 -30328765 + L2 LINE L2 2921 2978 -335 30 0 0 0 chr5 169301416 169301446 -30328704 + AT_rich Low_complexity Low_complexity 1 30 0 471 290 93 25 chr5 169301780 169301942 -30328208 - MIR3 SINE MIR -2 206 34 2005 141 7 0 chr5 169302893 169303177 -30326973 + AluJo SINE Alu 9 294 -18 310 208 192 0 chr5 169303605 169303730 -30326420 - MIR SINE MIR -27 235 87 1799 111 15 11 chr5 169304147 169304384 -30325766 + L1MA9 LINE L1 5558 5798 -514 258 32 0 0 chr5 169304384 169304415 -30325735 + (CA)n Simple_repeat Simple_repeat 1 31 0 1799 111 15 11 chr5 169304415 169304447 -30325703 + L1MA9 LINE L1 5798 5828 -484 991 104 0 8 chr5 169304447 169304581 -30325569 + AluJb SINE Alu 1 133 -179 2028 141 0 7 chr5 169304603 169304909 -30325241 + AluSq SINE Alu 4 307 -6 274 258 21 75 chr5 169304924 169305110 -30325040 + L1ME4a LINE L1 5842 6017 -104 738 294 63 4 chr5 169305682 169305920 -30324230 + MIR SINE MIR 8 259 -3 603 361 22 7 chr5 169307067 169307341 -30322809 - L3 LINE CR1 -5 1572 1295 252 0 0 0 chr5 169307925 169307953 -30322197 + (A)n Simple_repeat Simple_repeat 1 28 0 186 39 0 0 chr5 169308011 169308037 -30322113 + L2 LINE L2 2924 2949 -365 539 160 21 3 chr5 169508778 169508905 -30121245 - HUERS-P2 LTR ERV1 -455 2633 2468 2909 214 21 12 chr5 169508906 169509512 -30120638 - HUERS-P2 LTR ERV1 -1708 1380 769 733 250 16 5 chr5 169509512 169509696 -30120454 - HUERS-P2 LTR ERV1 -2281 807 622 508 200 7 71 chr5 169509674 169509814 -30120336 - HUERS-P2 LTR ERV1 -2953 135 5 * 463 203 125 39 chr5 169509905 169510088 -30120062 - LTR1B LTR ERV1 -329 497 343 427 278 110 17 chr5 169510187 169510360 -30119790 - LTR1 LTR ERV1 -569 216 28 6595 154 77 7 chr5 169510360 169512717 -30117433 + L1MA4A LINE L1 3788 6299 0 3467 153 49 20 chr5 169512717 169513069 -30117081 + L1MA5 LINE L1 5593 5933 -367 8624 118 8 14 chr5 169513069 169514361 -30115789 + HSMAR1 DNA Mariner 2 1286 -1 3467 153 49 20 chr5 169514361 169514691 -30115459 + L1MA5 LINE L1 5933 6300 0 285 98 0 0 chr5 169515039 169515080 -30115070 + (TG)n Simple_repeat Simple_repeat 2 42 0 496 317 75 27 chr5 169515162 169515445 -30114705 - L1MC4a LINE L1 -1919 5889 5586 1979 143 51 11 chr5 169515445 169515795 -30114355 - THE1B LTR MaLR 0 364 1 496 317 75 27 chr5 169515795 169515842 -30114308 - L1MC4a LINE L1 -2222 5586 5543 3117 207 63 6 chr5 169515928 169516618 -30113532 - L1MA9 LINE L1 -149 6163 5514 499 138 0 0 chr5 169516618 169516698 -30113452 + MADE1 DNA Mariner 1 80 0 3117 207 63 6 chr5 169516698 169517344 -30112806 - L1MA9 LINE L1 -798 5514 4744 203 182 23 0 chr5 169517386 169517430 -30112720 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 205 397 43 14 chr5 169517585 169517726 -30112424 + MIR SINE MIR 8 152 -110 608 217 14 7 chr5 169518687 169518830 -30111320 + MIR SINE MIR 90 233 -29 238 333 26 0 chr5 169518918 169518996 -30111154 - MIR SINE MIR -117 145 66 266 224 27 109 chr5 169519216 169519363 -30110787 - L2 LINE L2 -75 3238 3104 885 201 221 0 chr5 169519399 169519598 -30110552 + MIR SINE MIR 8 250 -12 2224 133 0 0 chr5 169519638 169519939 -30110211 + AluSx SINE Alu 1 301 -11 503 303 26 0 chr5 169519940 169520092 -30110058 - L2 LINE L2 -333 2980 2825 1075 245 180 21 chr5 169521152 169521585 -30108565 - MLT1H1 LTR MaLR -53 502 1 283 216 102 23 chr5 169521869 169521957 -30108193 - MIR3 SINE MIR -54 154 60 24 85 0 0 chr5 169522686 169522745 -30107405 + AT_rich Low_complexity Low_complexity 1 59 0 263 264 83 0 chr5 169522759 169522831 -30107319 - MIR3 SINE MIR -11 197 120 355 301 15 44 chr5 169522859 169522995 -30107155 + MIR SINE MIR 81 212 -50 539 240 55 14 chr5 169523881 169524027 -30106123 - MIR SINE MIR -1 261 110 869 171 46 0 chr5 169524228 169524403 -30105747 - MER20 DNA MER1_type 0 219 37 625 265 137 52 chr5 169524586 169525008 -30105142 + L2 LINE L2 2856 3313 0 313 329 20 46 chr5 169525098 169525250 -30104900 + MER5A DNA MER1_type 5 152 -37 201 279 51 25 chr5 169525533 169525612 -30104538 - MIR SINE MIR -99 163 83 604 278 159 18 chr5 169525800 169526027 -30104123 + MIR SINE MIR 4 262 0 214 356 129 10 chr5 169526044 169526145 -30104005 + L2 LINE L2 3158 3270 -2 * 243 266 63 13 chr5 169526143 169526222 -30103928 - MIR SINE MIR -129 133 51 231 36 0 0 chr5 169526229 169526257 -30103893 + (T)n Simple_repeat Simple_repeat 1 28 0 29403 27 0 0 chr5 169526282 169530742 -30099408 - L1PA2 LINE L1 0 6155 1694 970 106 0 0 chr5 169531100 169531242 -30098908 - L1MA6 LINE L1 -1 6299 6158 317 339 8 8 chr5 169531732 169531850 -30098300 - MIR3 SINE MIR -7 201 84 240 86 0 0 chr5 169532390 169532425 -30097725 + (CA)n Simple_repeat Simple_repeat 2 36 0 664 289 66 5 chr5 169532838 169533049 -30097101 - MIR SINE MIR -14 248 25 2140 247 65 2 chr5 169533151 169533782 -30096368 - L1MD2 LINE L1 -239 6120 5450 320 242 0 11 chr5 169533820 169533915 -30096235 - L1MD2 LINE L1 -1022 5124 5031 4806 107 8 29 chr5 169533916 169534713 -30095437 + L1PA16 LINE L1 5387 6166 0 699 204 28 6 chr5 169534729 169534910 -30095240 - L1MD2 LINE L1 -1106 5040 4856 752 231 15 5 chr5 169534924 169535123 -30095027 + L1MB7 LINE L1 5984 6184 0 278 231 9 19 chr5 169535177 169535285 -30094865 + (TA)n Simple_repeat Simple_repeat 1 107 0 349 310 0 10 chr5 169535536 169535636 -30094514 + L2 LINE L2 2574 2672 -642 3672 207 46 5 chr5 169535646 169536977 -30093173 - L1MB8 LINE L1 -9 6169 4788 357 282 153 21 chr5 169536980 169537221 -30092929 + L2 LINE L2 2664 2936 -378 412 240 146 53 chr5 169537314 169537485 -30092665 + L2 LINE L2 3119 3305 -8 459 272 49 25 chr5 169538177 169538339 -30091811 + MIR SINE MIR 6 171 -91 631 225 51 34 chr5 169538432 169538610 -30091540 - MIR SINE MIR -64 198 18 314 323 11 11 chr5 169538764 169538857 -30091293 - L2 LINE L2 -34 3238 3146 191 322 0 0 chr5 169538852 169538911 -30091239 + MIR SINE MIR 177 235 -27 * 729 78 0 0 chr5 169539138 169539241 -30090909 + AluY SINE Alu 206 308 -3 1878 148 32 9 chr5 169540379 169540717 -30089433 + MER7A DNA MER2_type 2 345 -1 22 35 0 0 chr5 169540773 169540802 -30089348 + AT_rich Low_complexity Low_complexity 1 29 0 444 261 124 20 chr5 169540812 169540965 -30089185 - MIR SINE MIR -82 180 12 1914 243 75 14 chr5 169540974 169541562 -30088588 + MLT1E3 LTR MaLR 1 624 0 507 280 119 43 chr5 169541562 169542333 -30087817 - L1ME4a LINE L1 -27 6094 5265 1458 259 27 85 chr5 169543578 169543879 -30086271 - MLT1G LTR MaLR -29 561 309 489 34 0 0 chr5 169543879 169543938 -30086212 + (TA)n Simple_repeat Simple_repeat 1 59 0 1458 259 27 85 chr5 169543938 169544222 -30085928 - MLT1G LTR MaLR -281 309 10 1067 296 80 14 chr5 169544229 169544668 -30085482 - LTR16C LTR ERVL -20 471 4 297 378 18 0 chr5 169544724 169544835 -30085315 + L2 LINE L2 3129 3241 -31 256 351 105 21 chr5 169544973 169545212 -30084938 + L2 LINE L2 2380 2638 -676 3052 91 2 0 chr5 169545333 169545786 -30084364 + L1P LINE L1 4886 5339 -807 192 343 47 47 chr5 169545896 169546068 -30084082 + L2 LINE L2 2899 3070 -202 222 242 30 15 chr5 169547269 169547311 -30082839 + GA-rich Low_complexity Low_complexity 2 47 -21 7426 34 2 9 chr5 169547311 169548379 -30081771 + L1PA5 LINE L1 5091 6152 -2 222 242 30 15 chr5 169548379 169548402 -30081748 + GA-rich Low_complexity Low_complexity 47 68 0 2220 265 38 31 chr5 169548636 169549503 -30080647 - L1ME LINE L1 -5177 893 21 21 0 0 0 chr5 169549927 169549948 -30080202 + AT_rich Low_complexity Low_complexity 1 21 0 239 212 71 24 chr5 169550836 169550921 -30079229 + MER102b DNA MER1_type 248 336 -5 1852 170 7 0 chr5 169551654 169551942 -30078208 - AluSx SINE Alu -12 300 11 400 266 29 7 chr5 169552112 169552251 -30077899 + L1ME LINE L1 5660 5801 -320 244 359 0 0 chr5 169552337 169552415 -30077735 - L2 LINE L2 -560 2754 2677 347 280 30 71 chr5 169553301 169553380 -30076770 + MIR SINE MIR 21 102 -147 6122 146 64 50 chr5 169553380 169554640 -30075510 - MER52C LTR ERV1 0 1278 1 347 280 30 71 chr5 169554640 169554725 -30075425 + MIR SINE MIR 102 188 -61 1866 153 13 22 chr5 169554737 169555051 -30075099 - AluJb SINE Alu -1 311 1 1921 151 20 3 chr5 169555061 169555353 -30074797 - AluSx SINE Alu -15 297 1 213 385 10 0 chr5 169556959 169557055 -30073095 + MIR SINE MIR 21 117 -91 3280 225 48 31 chr5 169557069 169557912 -30072238 + L1ME1 LINE L1 4739 5614 -552 1489 193 43 7 chr5 169557912 169558213 -30071937 - AluJo SINE Alu 0 312 1 3280 225 48 31 chr5 169558213 169558771 -30071379 + L1ME1 LINE L1 5614 6161 -5 2256 105 7 0 chr5 169558877 169559181 -30070969 - AluSp SINE Alu -7 306 1 903 236 61 18 chr5 169559182 169559411 -30070739 - LTR40a LTR ERVL -269 250 12 262 333 99 23 chr5 169559458 169559629 -30070521 + MIR SINE MIR 29 212 -50 804 221 27 101 chr5 169561437 169561735 -30068415 + Charlie8 DNA MER1_type 1 276 -2141 374 249 10 15 chr5 169562884 169563098 -30067052 + CT-rich Low_complexity Low_complexity 1 212 0 183 260 180 0 chr5 169563748 169563798 -30066352 - MER5B DNA MER1_type -61 117 59 337 328 40 24 chr5 169564747 169564872 -30065278 - L2 LINE L2 -4 3268 3142 2172 228 64 58 chr5 169565099 169565322 -30064828 + L1ME1 LINE L1 5398 5618 -548 1665 180 17 7 chr5 169565322 169565617 -30064533 + AluJo SINE Alu 1 298 -14 2172 228 64 58 chr5 169565617 169566112 -30064038 + L1ME1 LINE L1 5618 6120 -46 251 207 253 0 chr5 169566056 169566143 -30064007 + L1MA10 LINE L1 6224 6332 -2 * 316 310 18 58 chr5 169566199 169566370 -30063780 + MIR SINE MIR 20 183 -79 410 341 97 77 chr5 169566906 169567337 -30062813 + L2 LINE L2 2813 3252 -20 667 264 0 0 chr5 169567435 169567590 -30062560 - MIR SINE MIR -93 169 15 190 255 0 0 chr5 169567620 169567667 -30062483 + MIR3 SINE MIR 160 206 -2 202 234 0 0 chr5 169568232 169568279 -30061871 + T-rich Low_complexity Low_complexity 1 47 0 1850 164 0 0 chr5 169568311 169568585 -30061565 - AluJo SINE Alu -38 274 1 460 268 170 10 chr5 169568664 169568858 -30061292 - MIR SINE MIR -9 253 29 357 342 25 0 chr5 169569000 169569120 -30061030 + MER5C DNA MER1_type 1 123 -201 210 241 0 0 chr5 169569150 169569204 -30060946 + MER5C DNA MER1_type 220 273 -51 508 276 144 0 chr5 169569358 169569532 -30060618 + MIR SINE MIR 54 252 -10 851 213 27 22 chr5 169569960 169570143 -30060007 + MIR SINE MIR 7 190 -72 218 219 16 0 chr5 169570303 169570367 -30059783 + (CATA)n Simple_repeat Simple_repeat 4 68 0 566 211 60 21 chr5 169570909 169571068 -30059082 + L1MD3 LINE L1 6678 6888 -1107 2974 190 30 13 chr5 169571080 169571680 -30058470 + L1MA4 LINE L1 5685 6294 -6 229 317 24 12 chr5 169571792 169571874 -30058276 - L3b LINE CR1 -115 1468 1386 3432 228 25 22 chr5 169572018 169572910 -30057240 + L1MC3 LINE L1 6872 7765 -20 234 0 0 0 chr5 169572915 169572941 -30057209 + (TA)n Simple_repeat Simple_repeat 2 27 0 3302 241 125 31 chr5 169573494 169574487 -30055663 + L2 LINE L2 1944 3075 -238 615 163 169 30 chr5 169574487 169574653 -30055497 - MER53 DNA DNA 0 189 1 3302 241 125 31 chr5 169574653 169574917 -30055233 + L2 LINE L2 3075 3313 0 339 248 139 2 chr5 169574981 169575113 -30055037 - MIR SINE MIR -78 184 37 2765 223 13 27 chr5 169575227 169575938 -30054212 - L1MC3 LINE L1 -246 7539 6872 552 311 77 8 chr5 169576675 169576910 -30053240 + MIR SINE MIR 3 253 -9 185 318 0 16 chr5 169577216 169577279 -30052871 + MIR SINE MIR 90 151 -111 399 305 68 34 chr5 169578774 169579065 -30051085 + L2 LINE L2 2758 3058 -255 260 274 0 14 chr5 169579148 169579221 -30050929 + MER20 DNA MER1_type 1 72 -147 320 281 36 72 chr5 169579370 169579398 -30050752 + L2 LINE L2 3139 3166 -106 2158 188 137 7 chr5 169579398 169579845 -30050305 - MLT1D LTR MaLR 0 505 1 320 281 36 72 chr5 169579845 169579955 -30050195 + L2 LINE L2 3166 3272 0 1637 206 5 86 chr5 169580369 169580766 -30049384 - MLT1A1 LTR MaLR 0 365 1 221 348 34 56 chr5 169581916 169582094 -30048056 + MIR3 SINE MIR 4 177 -31 558 220 126 51 chr5 169582288 169582454 -30047696 + MIR SINE MIR 29 216 -46 14362 144 54 6 chr5 169582454 169584760 -30045390 + Tigger1 DNA MER2_type 1 2417 -1 558 220 126 51 chr5 169584760 169584807 -30045343 + MIR SINE MIR 216 258 -4 359 322 42 59 chr5 169584854 169585143 -30045007 + MLT1K LTR MaLR 282 565 -23 199 367 0 0 chr5 169585152 169585212 -30044938 + L3 LINE CR1 1518 1577 0 676 269 51 55 chr5 169585452 169585815 -30044335 + L1ME LINE L1 5385 5743 -421 24 53 0 0 chr5 169585883 169585921 -30044229 + AT_rich Low_complexity Low_complexity 1 38 0 770 167 0 6 chr5 169585949 169586111 -30044039 + GA-rich Low_complexity Low_complexity 1 161 0 257 164 0 18 chr5 169586432 169586487 -30043663 + (TG)n Simple_repeat Simple_repeat 2 55 0 718 270 69 33 chr5 169586534 169586838 -30043312 - L2 LINE L2 -472 2842 2528 2808 116 3 11 chr5 169586877 169587255 -30042895 - THE1C LTR MaLR 0 375 1 535 299 39 26 chr5 169589709 169589940 -30040210 + MIR SINE MIR 27 260 -2 204 343 111 0 chr5 169589973 169590072 -30040078 + L2 LINE L2 3138 3247 -25 21 57 0 0 chr5 169591038 169591073 -30039077 + AT_rich Low_complexity Low_complexity 1 35 0 700 298 71 62 chr5 169591394 169591944 -30038206 - LTR67 LTR ERVL 0 557 3 522 307 7 20 chr5 169592038 169592188 -30037962 + MIR SINE MIR 9 156 -106 1111 273 125 25 chr5 169592303 169592735 -30037415 + MLT1K LTR MaLR 1 475 -1 654 277 95 17 chr5 169593601 169593832 -30036318 - MIR SINE MIR -2 260 12 787 287 84 42 chr5 169594487 169595055 -30035095 - L2 LINE L2 -25 3288 2707 589 276 25 20 chr5 169595484 169595683 -30034467 + MIR SINE MIR 20 219 -43 1555 209 33 0 chr5 169595854 169596156 -30033994 + MER58B DNA MER1_type 29 340 -1 573 335 30 0 chr5 169597013 169597210 -30032940 - MIR SINE MIR -25 237 35 2386 213 106 0 chr5 169597747 169597954 -30032196 - L1ME2 LINE L1 -9 6155 5949 693 322 116 7 chr5 169597954 169598367 -30031783 - L1MA5A LINE L1 -370 5927 5470 1821 177 3 3 chr5 169599153 169599458 -30030692 - AluJb SINE Alu -7 305 1 310 313 88 62 chr5 169599835 169600027 -30030123 - MIR SINE MIR -2 260 64 222 37 0 0 chr5 169600268 169600295 -30029855 + (TG)n Simple_repeat Simple_repeat 2 28 0 278 259 9 56 chr5 169600296 169600404 -30029746 - MIR SINE MIR -67 195 93 5179 115 138 97 chr5 169600494 169602016 -30028134 + pTR5 LTR ERV1 375 2438 0 210 162 0 0 chr5 169602078 169602115 -30028035 + (TAA)n Simple_repeat Simple_repeat 1 37 0 324 244 0 23 chr5 169602128 169602214 -30027936 - MIR SINE MIR -77 185 102 23 0 0 0 chr5 169602493 169602516 -30027634 + AT_rich Low_complexity Low_complexity 1 23 0 394 217 33 0 chr5 169602875 169602967 -30027183 - MER53 DNA DNA -94 95 1 528 243 68 94 chr5 169602969 169603204 -30026946 + MIR SINE MIR 32 260 -2 491 318 24 58 chr5 169603374 169603629 -30026521 - MIR3 SINE MIR -5 257 14 190 304 18 0 chr5 169603651 169603707 -30026443 - L2 LINE L2 -86 3227 3171 267 209 0 121 chr5 169604357 169604448 -30025702 + MIR3 SINE MIR 124 203 -5 2618 174 78 9 chr5 169604532 169605056 -30025094 - L1MB4 LINE L1 -34 6146 5587 582 347 38 30 chr5 169605151 169605413 -30024737 - L2 LINE L2 -15 3257 2994 936 239 60 0 chr5 169605418 169605619 -30024531 + MER58A DNA MER1_type 6 218 -6 638 107 19 10 chr5 169605741 169605844 -30024306 + L1MB4 LINE L1 5799 5902 -278 1165 245 76 51 chr5 169605845 169606276 -30023874 - MLT1C LTR MaLR -19 481 1 196 356 34 8 chr5 169606276 169606394 -30023756 - L2 LINE L2 -404 2910 2790 241 322 72 33 chr5 169608305 169608392 -30021758 - L2 LINE L2 -19 3253 3156 960 200 85 0 chr5 169608392 169608592 -30021558 - MER20 DNA MER1_type 0 219 3 241 322 72 33 chr5 169608592 169608656 -30021494 - L2 LINE L2 -116 3156 3096 219 340 160 0 chr5 169608827 169608921 -30021229 - L2 LINE L2 -1 3271 3163 850 264 16 24 chr5 169608939 169609185 -30020965 + MIR SINE MIR 18 261 -1 624 251 46 17 chr5 169609634 169609809 -30020341 + L3b LINE CR1 1202 1381 -202 1105 199 9 5 chr5 169610076 169610292 -30019858 + MER20 DNA MER1_type 2 218 -1 668 260 99 5 chr5 169610390 169610582 -30019568 + MLT1I LTR MaLR 1 210 -199 618 307 98 4 chr5 169610775 169611000 -30019150 + MIR SINE MIR 8 253 -9 * 854 249 57 9 chr5 169610950 169611179 -30018971 - MIR SINE MIR -17 245 6 1698 132 21 94 chr5 169612653 169612993 -30017157 - AluYb8 SINE Alu -2 316 2 201 312 91 26 chr5 169613063 169613140 -30017010 + L2 LINE L2 3099 3180 -92 199 295 95 0 chr5 169614176 169614271 -30015879 - MIR3 SINE MIR -14 194 91 228 329 13 0 chr5 169614618 169614694 -30015456 + L1ME LINE L1 366 442 -5954 330 388 12 0 chr5 169614966 169615131 -30015019 + L1ME LINE L1 764 930 -5466 321 293 65 8 chr5 169615363 169615486 -30014664 + L1ME LINE L1 1168 1297 -5112 503 255 62 76 chr5 169615563 169615801 -30014349 + L1ME LINE L1 1450 1690 -4897 1491 154 14 57 chr5 169615801 169616081 -30014069 + AluSx SINE Alu 33 300 -12 503 255 62 76 chr5 169616081 169616256 -30013894 + L1ME LINE L1 1690 1856 -4731 2902 13 0 0 chr5 169616256 169616574 -30013576 + AluYb8 SINE Alu 1 318 0 503 255 62 76 chr5 169616574 169616711 -30013439 + L1ME LINE L1 1856 1993 -4594 270 170 248 71 chr5 169617028 169617169 -30012981 - MLT1H LTR MaLR -245 304 139 209 325 26 0 chr5 169617188 169617265 -30012885 - L2 LINE L2 -1000 2314 2236 4944 118 36 37 chr5 169617270 169617301 -30012849 + L1PA16 LINE L1 5304 5334 -832 2355 74 10 19 chr5 169617301 169617612 -30012538 + AluY SINE Alu 1 308 -3 4944 118 36 37 chr5 169617612 169617944 -30012206 + L1PA16 LINE L1 5334 5665 -501 2926 123 12 2 chr5 169617944 169618368 -30011782 + MSTA LTR MaLR 1 428 0 4944 118 36 37 chr5 169618368 169618858 -30011292 + L1PA16 LINE L1 5665 6157 -9 183 100 0 0 chr5 169618860 169618890 -30011260 + (CATA)n Simple_repeat Simple_repeat 2 31 0 292 305 33 16 chr5 169619081 169619206 -30010944 + MIR SINE MIR 56 185 -67 627 161 19 180 chr5 169619526 169619589 -30010561 - MIR SINE MIR -72 190 119 6993 172 16 19 chr5 169619589 169620407 -30009743 - L1PA15 LINE L1 -3 6162 5343 1972 153 0 3 chr5 169620407 169620702 -30009448 + AluJb SINE Alu 3 296 -16 6993 172 16 19 chr5 169620702 169622083 -30008067 - L1PA15 LINE L1 -822 5343 3955 627 161 19 180 chr5 169622083 169622230 -30007920 - MIR SINE MIR -143 119 14 1220 145 115 75 chr5 169622766 169623213 -30006937 - MER51A LTR ERV1 0 634 2 967 225 83 70 chr5 169623214 169623493 -30006657 - MER113 DNA MER1_type? -52 469 179 1766 156 29 0 chr5 169623493 169623788 -30006362 - AluSx SINE Alu 0 303 1 967 225 83 70 chr5 169623788 169623964 -30006186 - MER113 DNA MER1_type? -342 179 7 210 372 131 29 chr5 169624015 169624359 -30005791 + L3 LINE CR1 1041 1419 -158 203 321 44 57 chr5 169624348 169624507 -30005643 + MIR3 SINE MIR 6 162 -46 * 1451 165 71 3 chr5 169625736 169626033 -30004117 + MER33 DNA MER1_type 1 317 -7 323 328 15 8 chr5 169626050 169626184 -30003966 - MIR3 SINE MIR -41 167 33 207 283 115 21 chr5 169626218 169626385 -30003765 + MIR SINE MIR 20 203 -59 267 31 0 0 chr5 169626487 169626519 -30003631 + (CCA)n Simple_repeat Simple_repeat 1 32 0 612 208 139 0 chr5 169626525 169626669 -30003481 + MIR SINE MIR 99 262 0 558 147 17 9 chr5 169627367 169627483 -30002667 + CT-rich Low_complexity Low_complexity 3 119 0 228 303 15 0 chr5 169627592 169627658 -30002492 + CT-rich Low_complexity Low_complexity 2 68 0 280 331 200 0 chr5 169627839 169627969 -30002181 + MIR SINE MIR 46 201 -61 1378 73 0 6 chr5 169627972 169628217 -30001933 + AluY SINE Alu 1 291 -20 232 379 45 8 chr5 169628699 169628831 -30001319 + L2 LINE L2 2805 2941 -373 459 308 72 0 chr5 169629029 169629224 -30000926 + MIR SINE MIR 2 210 -52 4671 182 20 7 chr5 169629230 169629530 -30000620 + L1MB7 LINE L1 5184 5479 -705 785 145 15 15 chr5 169629530 169629661 -30000489 + FLAM_C SINE Alu 3 133 0 4671 182 20 7 chr5 169629661 169630328 -29999822 + L1MB7 LINE L1 5479 6162 -22 242 345 35 28 chr5 169630932 169631074 -29999076 + MIR SINE MIR 36 178 -84 28 0 0 0 chr5 169631338 169631366 -29998784 + AT_rich Low_complexity Low_complexity 1 28 0 827 307 89 43 chr5 169631455 169632505 -29997645 + L1M4 LINE L1 3504 4602 -1544 463 271 123 38 chr5 169632541 169632833 -29997317 + L1M4 LINE L1 4768 5084 -1062 582 219 68 162 chr5 169632895 169633160 -29996990 - MLT1E LTR MaLR -353 240 1 407 283 78 25 chr5 169633810 169634054 -29996096 - MIR SINE MIR -2 260 4 192 226 60 135 chr5 169634183 169634232 -29995918 + MIR SINE MIR 66 117 -145 366 23 0 0 chr5 169634232 169634275 -29995875 + (TC)n Simple_repeat Simple_repeat 2 44 0 444 285 0 49 chr5 169634275 169634398 -29995752 - FLAM_A SINE Alu -15 118 2 192 226 60 135 chr5 169634398 169634480 -29995670 + MIR SINE MIR 115 188 -74 519 299 40 61 chr5 169635384 169636115 -29994035 + L1MEd LINE L1 527 1281 -4876 299 282 124 52 chr5 169636138 169636429 -29993721 + L1MEd LINE L1 87 398 -6025 2143 129 13 0 chr5 169636520 169636822 -29993328 + AluSq SINE Alu 1 306 -7 8429 196 62 39 chr5 169636836 169638295 -29991855 + L1PA16 LINE L1 2506 3931 -2235 2226 80 3 14 chr5 169638295 169638584 -29991566 + AluY SINE Alu 1 286 -25 341 21 0 21 chr5 169638587 169638634 -29991516 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 8429 196 62 39 chr5 169638634 169640612 -29989538 + L1PA16 LINE L1 3932 6030 -136 2395 80 10 13 chr5 169640612 169640924 -29989226 + AluY SINE Alu 1 311 0 8429 196 62 39 chr5 169640924 169641064 -29989086 + L1PA16 LINE L1 6030 6165 -1 344 266 113 0 chr5 169641057 169641331 -29988819 + L1MEd LINE L1 3876 4180 -2761 * 2592 163 30 7 chr5 169641352 169641787 -29988363 + MER54A LTR ERVL 1 445 -456 387 271 89 21 chr5 169641813 169642215 -29987935 + L1MEd LINE L1 4187 4638 -2303 677 154 29 7 chr5 169642221 169642357 -29987793 + L1MD3 LINE L1 7845 7983 -12 681 311 52 23 chr5 169642367 169642815 -29987335 + L1MEd LINE L1 4646 5110 -1831 2447 57 0 13 chr5 169642815 169643113 -29987037 - AluY SINE Alu -15 296 3 681 311 52 23 chr5 169643113 169643146 -29987004 + L1MEd LINE L1 5110 5141 -1800 1051 267 77 3 chr5 169643167 169643557 -29986593 + L1MEd LINE L1 5192 5610 -1331 296 324 55 50 chr5 169643900 169644082 -29986068 + LTR16C LTR ERVL 309 491 0 2066 255 36 20 chr5 169644101 169645157 -29984993 + L1MEd LINE L1 5681 6757 -208 260 209 90 0 chr5 169645278 169645345 -29984805 + L1ME3A LINE L1 6816 6888 -77 1170 146 32 139 chr5 169645349 169645746 -29984404 - Tigger7 DNA MER2_type 0 2587 183 1143 231 77 90 chr5 169645947 169646479 -29983671 - LTR1B LTR ERV1 -301 525 1 738 196 26 26 chr5 169646489 169646642 -29983508 - Tigger7 DNA MER2_type -580 153 1 1175 178 73 41 chr5 169647869 169648183 -29981967 - MER33 DNA MER1_type 0 324 1 295 262 24 12 chr5 169648239 169648323 -29981827 + MIR SINE MIR 178 262 0 226 184 0 20 chr5 169648323 169648372 -29981778 + (TTA)n Simple_repeat Simple_repeat 2 49 0 231 229 76 25 chr5 169648523 169648641 -29981509 + MER113 DNA MER1_type? 1 124 -397 25 51 0 0 chr5 169648725 169648764 -29981386 + AT_rich Low_complexity Low_complexity 1 39 0 618 264 48 0 chr5 169648848 169649015 -29981135 + MIR SINE MIR 52 226 -36 285 341 123 12 chr5 169649095 169649265 -29980885 - MIR SINE MIR -72 190 2 208 135 0 0 chr5 169650013 169650050 -29980100 + (TATAA)n Simple_repeat Simple_repeat 1 37 0 1476 199 40 57 chr5 169650403 169650583 -29979567 + MLT1A1 LTR MaLR 1 182 -183 351 0 0 0 chr5 169650583 169650622 -29979528 + (TC)n Simple_repeat Simple_repeat 1 39 0 1476 199 40 57 chr5 169650622 169650812 -29979338 + MLT1A1 LTR MaLR 182 365 0 23 0 0 0 chr5 169651348 169651371 -29978779 + AT_rich Low_complexity Low_complexity 1 23 0 2143 112 0 0 chr5 169651371 169651649 -29978501 - AluSg SINE Alu -32 278 1 1823 152 43 12 chr5 169652007 169652329 -29977821 + MER2 DNA MER2_type 14 345 0 183 241 19 37 chr5 169652456 169652510 -29977640 - L3 LINE CR1 -11 1566 1514 208 301 0 72 chr5 169652546 169652585 -29977565 - L3 LINE CR1 -450 1127 1096 730 156 126 0 chr5 169652585 169652752 -29977398 + MER53 DNA DNA 1 188 -1 208 301 0 72 chr5 169652752 169652795 -29977355 - L3 LINE CR1 -481 1096 1051 261 339 42 25 chr5 169652930 169653048 -29977102 - MIR SINE MIR -136 126 7 343 302 79 43 chr5 169653323 169653462 -29976688 + L2 LINE L2 3127 3270 -2 254 279 108 27 chr5 169653991 169654102 -29976048 + MIR3 SINE MIR 40 159 -49 327 281 16 47 chr5 169654181 169654309 -29975841 + MER103 DNA DNA 3 126 -40 225 236 55 0 chr5 169654310 169654365 -29975785 + MIR SINE MIR 156 213 -49 207 100 0 0 chr5 169654886 169654916 -29975234 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 257 339 65 77 chr5 169654917 169655177 -29974973 - L2 LINE L2 -12 3260 3004 183 306 122 31 chr5 169655295 169655393 -29974757 + MIR SINE MIR 47 153 -109 323 281 0 0 chr5 169655413 169655502 -29974648 - MIR SINE MIR -2 260 172 497 259 7 43 chr5 169655616 169655755 -29974395 - MIR SINE MIR -111 151 18 186 283 0 22 chr5 169655809 169655855 -29974295 - L2 LINE L2 -11 3302 3258 * 742 278 107 19 chr5 169655828 169656044 -29974106 - MIR SINE MIR -23 239 5 2520 59 0 19 chr5 169656355 169656662 -29973488 + AluY SINE Alu 1 301 -10 432 300 101 13 chr5 169657444 169657681 -29972469 - MIR SINE MIR 0 262 5 1048 261 83 20 chr5 169658093 169658552 -29971598 + MLT1K LTR MaLR 22 580 -8 2075 103 3 43 chr5 169659123 169659423 -29970727 + AluSc SINE Alu 1 288 -21 210 71 0 0 chr5 169660023 169660051 -29970099 + (CA)n Simple_repeat Simple_repeat 1 28 0 2109 93 7 0 chr5 169661086 169661390 -29968760 + AluY SINE Alu 1 306 0 523 268 115 66 chr5 169661752 169661914 -29968236 - MIR SINE MIR 0 262 83 1778 178 0 7 chr5 169661914 169662201 -29967949 - AluJo SINE Alu -21 291 7 523 268 115 66 chr5 169662201 169662281 -29967869 - MIR SINE MIR -179 83 8 258 340 0 0 chr5 169662446 169662543 -29967607 + MER103 DNA DNA 8 104 -62 2204 110 7 0 chr5 169662996 169663295 -29966855 - AluSx SINE Alu -11 301 1 197 387 32 0 chr5 169663296 169663389 -29966761 + L2 LINE L2 3177 3272 0 9630 164 83 16 chr5 169663621 169665348 -29964802 + L1MA3 LINE L1 11 1853 -5712 15980 152 17 9 chr5 169665353 169669826 -29960324 + L1MA3 LINE L1 3208 7724 0 1624 184 0 4 chr5 169669971 169670237 -29959913 + AluJb SINE Alu 3 267 -45 1660 194 115 10 chr5 169670396 169670814 -29959336 + MLT1C LTR MaLR 6 467 0 929 304 46 35 chr5 169670814 169671170 -29958980 - LTR16B LTR ERVL -40 424 65 690 258 36 89 chr5 169671286 169671534 -29958616 + MIR SINE MIR 1 235 -27 200 167 0 19 chr5 169671568 169671622 -29958528 + (TTA)n Simple_repeat Simple_repeat 3 55 0 2346 152 12 8 chr5 169671865 169672266 -29957884 + MER57A LTR ERV1 1 403 0 275 337 39 45 chr5 169672303 169672553 -29957597 + L2 LINE L2 2786 3047 -225 263 259 49 0 chr5 169672556 169672637 -29957513 + L2 LINE L2 2304 2388 -926 381 288 8 0 chr5 169672760 169672878 -29957272 + MLT1K LTR MaLR 470 588 0 213 94 0 0 chr5 169672881 169672913 -29957237 + (CAT)n Simple_repeat Simple_repeat 2 33 0 869 280 53 50 chr5 169673385 169673763 -29956387 + MLT1K LTR MaLR 191 569 -19 302 233 67 33 chr5 169674164 169674314 -29955836 - L1ME4a LINE L1 -200 5921 5767 630 37 0 12 chr5 169675066 169675148 -29955002 - L1PA5 LINE L1 -2 6152 6072 244 159 23 0 chr5 169676580 169676624 -29953526 - MADE1 DNA Mariner -33 47 3 26 0 0 0 chr5 169677093 169677119 -29953031 + AT_rich Low_complexity Low_complexity 1 26 0 551 324 77 5 chr5 169677386 169677608 -29952542 - MIR SINE MIR -23 239 2 343 274 36 0 chr5 169678399 169678483 -29951667 + MIR SINE MIR 57 143 -65 477 290 107 31 chr5 169679424 169679648 -29950502 + Charlie8 DNA MER1_type 4 244 -2173 518 279 0 45 chr5 169679752 169679931 -29950219 + Charlie8 DNA MER1_type 373 543 -1874 188 234 172 16 chr5 169679996 169680060 -29950090 - MIR3 SINE MIR -50 158 85 1509 204 48 20 chr5 169680571 169680748 -29949402 - MLT1A2 LTR MaLR -11 363 192 306 0 0 0 chr5 169680748 169680782 -29949368 + (GA)n Simple_repeat Simple_repeat 2 35 0 1509 204 48 20 chr5 169680782 169680957 -29949193 - MLT1A2 LTR MaLR -182 192 1 291 188 38 25 chr5 169680981 169681061 -29949089 + LTR16C LTR ERVL 411 491 0 349 267 11 0 chr5 169681638 169681728 -29948422 + MIR SINE MIR 57 147 -61 322 385 40 6 chr5 169681730 169681904 -29948246 - L3 LINE CR1 -10 1567 1388 195 129 0 0 chr5 169681957 169681988 -29948162 + (CTTG)n Simple_repeat Simple_repeat 1 31 0 1945 138 29 35 chr5 169682388 169682765 -29947385 + THE1C LTR MaLR 1 375 0 1394 295 138 21 chr5 169683739 169684828 -29945322 - L1MEd LINE L1 -1831 4298 3083 821 276 80 21 chr5 169684882 169685013 -29945137 - L1MEd LINE L1 -3568 2561 2439 1302 236 7 20 chr5 169685013 169685309 -29944841 - AluJo SINE Alu -20 292 1 821 276 80 21 chr5 169685309 169685699 -29944451 - L1MEd LINE L1 -3690 2439 2057 387 274 64 98 chr5 169685924 169686185 -29943965 - L1MEd LINE L1 -4614 1696 1428 787 280 28 5 chr5 169686185 169686403 -29943747 + MER58A DNA MER1_type 1 223 -1 387 274 64 98 chr5 169686403 169686594 -29943556 - L1MEd LINE L1 -4882 1428 1232 1663 239 79 26 chr5 169686594 169687126 -29943024 - MLT1F1 LTR MaLR -4 563 4 2038 151 0 0 chr5 169687128 169687427 -29942723 - AluSx SINE Alu -11 301 3 387 274 64 98 chr5 169687427 169687944 -29942206 - L1MEd LINE L1 -5079 1231 709 600 297 67 58 chr5 169689323 169689858 -29940292 + MER34 LTR ERV1 3 542 0 217 345 181 0 chr5 169690167 169690283 -29939867 + MIR SINE MIR 1 137 -125 344 354 9 9 chr5 169690408 169690521 -29939629 - MIR3 SINE MIR -54 154 42 404 286 70 42 chr5 169691299 169691558 -29938592 + L1ME LINE L1 5554 5819 -302 441 323 26 42 chr5 169692125 169692317 -29937833 + L3 LINE CR1 1386 1574 -3 3555 154 25 15 chr5 169693254 169693934 -29936216 - L1MA4 LINE L1 -3 6297 5611 311 179 0 36 chr5 169693934 169694018 -29936132 + L1M1 LINE L1 3213 3293 -4272 198 103 0 0 chr5 169695567 169695596 -29934554 + (TC)n Simple_repeat Simple_repeat 2 30 0 1626 181 58 44 chr5 169696703 169697059 -29933091 + L1M1 LINE L1 3270 3645 -3920 219 69 0 0 chr5 169697059 169697088 -29933062 + (CA)n Simple_repeat Simple_repeat 2 30 0 1626 181 58 44 chr5 169697088 169697322 -29932828 + L1M1 LINE L1 3645 3874 -3691 24 0 0 0 chr5 169697379 169697403 -29932747 + AT_rich Low_complexity Low_complexity 1 24 0 249 272 11 0 chr5 169697411 169697503 -29932647 + L1ME LINE L1 4573 4665 -1481 735 154 7 29 chr5 169697530 169697666 -29932484 - MER89 LTR ERV1 -5 554 422 1148 248 27 3 chr5 169697667 169697965 -29932185 + L1ME LINE L1 5453 5757 -409 651 101 0 20 chr5 169697971 169698070 -29932080 + MER4A LTR ERV1 1 97 -567 1905 128 6 22 chr5 169698071 169698420 -29931730 + MER4A LTR ERV1 263 664 0 2228 210 23 4 chr5 169698530 169699050 -29931100 + L1M1 LINE L1 4117 4646 -2919 1802 198 37 3 chr5 169699260 169699613 -29930537 - MLT1A1 LTR MaLR 0 365 1 470 298 60 44 chr5 169699728 169700202 -29929948 + L1M2 LINE L1 5335 5714 -577 307 282 104 71 chr5 169700274 169700666 -29929484 - MLT1L LTR MaLR -2 522 186 22 94 0 0 chr5 169700741 169700805 -29929345 + AT_rich Low_complexity Low_complexity 1 64 0 31 26 0 0 chr5 169700999 169701037 -29929113 + AT_rich Low_complexity Low_complexity 1 38 0 622 249 65 0 chr5 169701138 169701323 -29928827 - MIR SINE MIR 0 262 66 1399 36 0 0 chr5 169701344 169701512 -29928638 + L1PA4 LINE L1 5985 6152 -3 385 308 53 8 chr5 169703435 169703568 -29926582 - MIR SINE MIR -110 152 14 208 253 23 46 chr5 169703643 169703730 -29926420 + GA-rich Low_complexity Low_complexity 6 90 0 387 98 0 0 chr5 169704760 169704821 -29925329 + (TC)n Simple_repeat Simple_repeat 2 62 0 232 157 43 71 chr5 169704764 169704834 -29925316 + LTR48 LTR ERV1 104 171 -616 * 583 14 0 0 chr5 169704916 169704988 -29925162 + L1PA3 LINE L1 6081 6152 -3 4996 158 40 9 chr5 169705049 169706015 -29924135 - L1MC1 LINE L1 -17 6316 5321 226 292 292 10 chr5 169707448 169707640 -29922510 + MIR SINE MIR 7 252 -10 252 406 0 8 chr5 169707739 169707872 -29922278 + L3 LINE CR1 677 808 -769 187 369 38 51 chr5 169707893 169707977 -29922173 - L2 LINE L2 -43 3229 3146 2209 167 50 19 chr5 169707977 169708396 -29921754 - MSTB1 LTR MaLR 0 432 1 187 369 38 51 chr5 169708396 169708468 -29921682 - L2 LINE L2 -126 3146 3075 684 320 88 51 chr5 169708737 169709224 -29920926 - L2 LINE L2 -5 3308 2804 1711 273 48 18 chr5 169709336 169710002 -29920148 + MER20B DNA MER1_type 97 782 -1 359 355 43 14 chr5 169710003 169710214 -29919936 - L2 LINE L2 -517 2797 2581 323 324 0 0 chr5 169710260 169710365 -29919785 - L3 LINE CR1 -308 1269 1165 249 139 0 0 chr5 169710365 169710401 -29919749 - U2 snRNA snRNA -152 36 1 424 353 77 27 chr5 169710402 169710663 -29919487 - L3 LINE CR1 -403 1174 901 204 222 19 19 chr5 169711099 169711153 -29918997 + MIR3 SINE MIR 154 207 -1 1906 234 63 40 chr5 169711238 169711789 -29918361 - MLT1G LTR MaLR 0 590 38 464 259 209 23 chr5 169712790 169713010 -29917140 - MIR SINE MIR 0 262 2 226 375 78 31 chr5 169713033 169713161 -29916989 - L2 LINE L2 -196 3076 2943 1591 176 24 39 chr5 169713162 169713492 -29916658 + L1MC1 LINE L1 5992 6316 -17 759 154 42 7 chr5 169713492 169713634 -29916516 + L1PB4 LINE L1 6008 6155 -1 246 265 145 0 chr5 169713698 169713781 -29916369 + L2 LINE L2 3191 3285 -28 417 277 123 45 chr5 169713794 169714014 -29916136 + MIR SINE MIR 8 244 -18 1556 185 35 0 chr5 169714337 169714624 -29915526 + MER7A DNA MER2_type 12 306 -40 185 354 118 8 chr5 169714657 169714784 -29915366 - MIR SINE MIR -113 149 9 295 224 188 0 chr5 169715210 169715295 -29914855 + MLT1J2 LTR MaLR 82 182 -268 252 176 122 54 chr5 169715428 169715502 -29914648 + MLT1J1 LTR MaLR 364 442 -4 263 356 103 0 chr5 169715668 169715755 -29914395 + L2 LINE L2 3198 3293 -20 322 239 7 187 chr5 169715934 169716089 -29914061 - L2 LINE L2 0 3313 3187 378 270 100 8 chr5 169716728 169716957 -29913193 - L2 LINE L2 -4 3309 3000 1183 173 96 110 chr5 169716957 169717437 -29912713 - MLT1E1 LTR MaLR -2 652 180 2723 140 9 4 chr5 169717506 169717962 -29912188 + LTR32 LTR ERVL 14 471 0 292 183 0 42 chr5 169717962 169718032 -29912118 - MLT1E1 LTR MaLR -583 71 5 232 280 13 0 chr5 169719711 169719786 -29910364 + (TA)n Simple_repeat Simple_repeat 2 77 0 22 56 0 0 chr5 169720073 169720109 -29910041 + AT_rich Low_complexity Low_complexity 1 36 0 761 299 151 9 chr5 169720154 169720472 -29909678 - L2 LINE L2 -7 3306 2944 667 257 6 0 chr5 169720526 169720701 -29909449 + L1MEc LINE L1 49 224 -6172 750 299 105 23 chr5 169720701 169721093 -29909057 - L2 LINE L2 -375 2939 2516 3245 246 74 34 chr5 169721775 169723114 -29907036 + L1MEc LINE L1 64 1456 -4940 496 223 10 10 chr5 169723174 169723277 -29906873 - MER5A DNA MER1_type -83 106 4 440 333 104 8 chr5 169723508 169723757 -29906393 + MLT1K LTR MaLR 14 286 -302 213 301 194 0 chr5 169724579 169724672 -29905478 + MIR3 SINE MIR 93 203 -5 403 313 60 53 chr5 169726355 169726505 -29903645 - L2 LINE L2 0 3272 3122 345 276 121 64 chr5 169726542 169726806 -29903344 + L2 LINE L2 3035 3313 0 329 343 30 0 chr5 169728221 169728355 -29901795 + MIR SINE MIR 125 262 0 1128 257 56 32 chr5 169728381 169728789 -29901361 - LTR16A LTR ERVL 0 450 33 258 333 32 21 chr5 169728842 169728935 -29901215 - MIR SINE MIR -92 116 23 432 0 0 0 chr5 169729189 169729237 -29900913 + (CA)n Simple_repeat Simple_repeat 2 49 0 428 278 60 8 chr5 169729245 169729378 -29900772 + MER5A DNA MER1_type 50 189 0 283 304 143 24 chr5 169729460 169729628 -29900522 - MIR3 SINE MIR -6 202 15 1747 133 50 56 chr5 169729900 169730277 -29899873 - THE1C LTR MaLR 0 375 1 1907 151 23 0 chr5 169731134 169731433 -29898717 + AluJb SINE Alu 6 311 -1 191 316 36 72 chr5 169732431 169732570 -29897580 - L2 LINE L2 -51 3221 3088 513 305 107 24 chr5 169732728 169732970 -29897180 - MIR SINE MIR -3 259 2 481 289 57 30 chr5 169733334 169733597 -29896553 + MLT1K LTR MaLR 313 582 -6 611 336 48 45 chr5 169734309 169734848 -29895302 - L2 LINE L2 -10 3303 2740 477 280 32 8 chr5 169734871 169734996 -29895154 - L2 LINE L2 -2 3311 3184 294 50 0 0 chr5 169735193 169735233 -29894917 + (T)n Simple_repeat Simple_repeat 1 40 0 441 0 0 0 chr5 169735580 169735629 -29894521 + (CA)n Simple_repeat Simple_repeat 2 50 0 580 282 90 26 chr5 169736017 169736251 -29893899 + MIR SINE MIR 2 250 -12 2413 144 49 7 chr5 169736916 169737325 -29892825 + MSTB LTR MaLR 1 426 0 8543 190 32 2 chr5 169737325 169738929 -29891221 + MSTB-int LTR MaLR 1 1651 0 2334 133 78 12 chr5 169738929 169739329 -29890821 + MSTB LTR MaLR 1 426 0 7015 28 0 0 chr5 169740168 169740990 -29889160 + L1PA4 LINE L1 5333 6154 -1 1709 220 13 46 chr5 169741023 169741323 -29888827 + L1ME1 LINE L1 5211 5519 -815 2133 184 76 5 chr5 169741323 169741759 -29888391 - MLT1C LTR MaLR 0 467 1 1709 220 13 46 chr5 169741759 169742322 -29887828 + L1ME1 LINE L1 5519 6333 -1 232 322 161 25 chr5 169742655 169742773 -29887377 - L2 LINE L2 -2 3270 3137 486 284 65 5 chr5 169743338 169743526 -29886624 + MIR SINE MIR 16 217 -45 249 325 158 53 chr5 169743722 169744134 -29886016 - L2 LINE L2 -6 3266 2812 198 0 0 0 chr5 169744349 169744371 -29885779 + (CA)n Simple_repeat Simple_repeat 1 22 0 22 0 0 0 chr5 169746307 169746329 -29883821 + AT_rich Low_complexity Low_complexity 1 22 0 259 306 102 19 chr5 169746385 169746493 -29883657 - L2 LINE L2 0 3272 3156 316 324 137 0 chr5 169747450 169747552 -29882598 - L2 LINE L2 0 3272 3157 423 315 22 28 chr5 169747815 169747993 -29882157 - MIR3 SINE MIR -14 194 18 511 320 20 65 chr5 169748120 169748461 -29881689 + MLT1K LTR MaLR 97 422 -166 472 239 254 33 chr5 169748782 169748995 -29881155 + MIR SINE MIR 3 262 0 1552 199 103 3 chr5 169749045 169749376 -29880774 - MLT1A1 LTR MaLR 0 365 2 1794 182 83 0 chr5 169749388 169749773 -29880377 - MLT1A1-int LTR MaLR -5 1730 1314 3029 227 39 70 chr5 169749906 169750853 -29879297 - MLT1A1-int LTR MaLR -725 1010 93 1011 166 0 5 chr5 169750853 169751046 -29879104 + L1MA4 LINE L1 6087 6278 -22 240 83 62 21 chr5 169751103 169751151 -29878999 + MLT1J1 LTR MaLR 386 435 -11 1769 151 15 87 chr5 169751168 169751559 -29878591 - MLT1A1 LTR MaLR -2 363 1 7758 22 0 0 chr5 169751681 169752580 -29877570 + L1PA3 LINE L1 5254 6152 -3 295 319 43 21 chr5 169752832 169752973 -29877177 - MIR3 SINE MIR -16 192 49 394 158 40 50 chr5 169754282 169754383 -29875767 - MIR3 SINE MIR -8 200 101 569 215 186 41 chr5 169754456 169754628 -29875522 + MIR SINE MIR 53 249 -13 637 286 11 22 chr5 169754766 169754951 -29875199 + MIR3 SINE MIR 25 207 -1 2505 178 2 9 chr5 169755267 169755694 -29874456 - MSTB LTR MaLR -2 424 1 404 281 8 33 chr5 169755917 169756038 -29874112 - MIR SINE MIR -31 231 114 2168 175 113 29 chr5 169756553 169756594 -29873556 - MLT2B1 LTR ERVL 0 520 484 276 100 0 0 chr5 169756594 169756634 -29873516 + (TGGA)n Simple_repeat Simple_repeat 3 42 0 2168 175 113 29 chr5 169756634 169757012 -29873138 - MLT2B1 LTR ERVL -36 484 54 2297 126 36 14 chr5 169757012 169757368 -29872782 - THE1B LTR MaLR 0 364 1 2168 175 113 29 chr5 169757368 169757427 -29872723 - MLT2B1 LTR ERVL -466 54 1 6332 148 10 2 chr5 169758394 169759528 -29870622 + L1MC1 LINE L1 5186 6328 -5 314 335 29 0 chr5 169759699 169759872 -29870278 + L1MC/D LINE L1 5613 5790 -2018 1025 200 25 0 chr5 169761250 169761450 -29868700 + MER20 DNA MER1_type 4 208 -11 610 323 178 30 chr5 169761484 169761854 -29868296 + L2 LINE L2 1749 2063 -1251 1909 205 50 46 chr5 169761854 169762357 -29867793 - MLT1D LTR MaLR 0 505 1 610 323 178 30 chr5 169762357 169762642 -29867508 + L2 LINE L2 2063 2501 -813 628 323 76 58 chr5 169762646 169763226 -29866924 + L2 LINE L2 2670 3272 0 1151 125 45 0 chr5 169765052 169765252 -29864898 + Tigger7 DNA MER2_type 2279 2487 0 336 102 0 0 chr5 169765359 169765408 -29864742 + (T)n Simple_repeat Simple_repeat 1 49 0 1677 186 3 7 chr5 169765735 169766031 -29864119 + AluSx SINE Alu 1 295 -17 307 261 90 0 chr5 169766178 169766289 -29863861 + L2 LINE L2 3146 3266 -6 625 283 77 24 chr5 169768128 169768467 -29861683 + L1ME LINE L1 5273 5629 -541 778 193 50 28 chr5 169768535 169768716 -29861434 + MER20 DNA MER1_type 32 216 -3 929 226 148 64 chr5 169768731 169769183 -29860967 + MLT1D LTR MaLR 16 505 0 1213 236 161 60 chr5 169769336 169769933 -29860217 + L1MA9 LINE L1 5618 6274 -38 1508 126 51 27 chr5 169769976 169770270 -29859880 + L1MA9 LINE L1 6002 6302 -10 241 276 78 9 chr5 169770386 169770502 -29859648 + L1ME LINE L1 5766 5889 -281 30 59 0 0 chr5 169770522 169770573 -29859577 + AT_rich Low_complexity Low_complexity 1 51 0 222 105 0 0 chr5 169772127 169772165 -29857985 + (TA)n Simple_repeat Simple_repeat 1 38 0 328 227 18 73 chr5 169772233 169772313 -29857837 + L2 LINE L2 3166 3240 -32 1498 184 34 87 chr5 169772313 169772725 -29857425 + MLT1B LTR MaLR 1 390 0 328 227 18 73 chr5 169772725 169772754 -29857396 + L2 LINE L2 3240 3269 -3 21 0 0 0 chr5 169772901 169772922 -29857228 + AT_rich Low_complexity Low_complexity 1 21 0 477 0 0 0 chr5 169773216 169773269 -29856881 + (TG)n Simple_repeat Simple_repeat 2 54 0 489 287 16 37 chr5 169773338 169773526 -29856624 + L2 LINE L2 3128 3311 -2 353 315 30 25 chr5 169774827 169775128 -29855022 + MLT1K LTR MaLR 175 510 -78 370 291 205 8 chr5 169775269 169775396 -29854754 - MIR SINE MIR -98 164 13 251 125 0 36 chr5 169775445 169775501 -29854649 - MLT2D LTR ERVL -12 508 455 219 250 0 0 chr5 169775503 169775563 -29854587 + GA-rich Low_complexity Low_complexity 2 61 0 1680 197 25 27 chr5 169775563 169775929 -29854221 - MLT2D LTR ERVL -48 366 2 407 259 168 9 chr5 169778266 169778486 -29851664 + MLT1L LTR MaLR 22 276 -339 475 249 65 71 chr5 169778489 169778658 -29851492 + MLT1L LTR MaLR 440 607 -8 269 50 0 25 chr5 169780156 169780196 -29849954 + (TTG)n Simple_repeat Simple_repeat 2 40 0 1952 109 80 0 chr5 169780587 169780861 -29849289 + AluSx SINE Alu 1 296 -16 289 284 86 9 chr5 169780905 169781021 -29849129 + MIR3 SINE MIR 60 184 -24 311 333 75 55 chr5 169781437 169781638 -29848512 - MIR SINE MIR -56 206 2 403 285 75 55 chr5 169781716 169781969 -29848181 + MIR SINE MIR 4 261 -1 522 123 0 75 chr5 169782487 169782593 -29847557 - MER5C DNA MER1_type 0 324 227 264 156 313 21 chr5 169782604 169782700 -29847450 - MER5C DNA MER1_type -200 124 1 789 185 123 18 chr5 169782819 169783046 -29847104 - MER33 DNA MER1_type -72 252 2 1033 72 7 0 chr5 169783060 169783199 -29846951 - L1PB1 LINE L1 0 6151 6012 11475 150 50 6 chr5 169783199 169787764 -29842386 - L1PBa LINE L1 -1315 5547 636 1238 121 5 0 chr5 169787766 169787965 -29842185 - L1PBa LINE L1 -6663 200 1 290 244 213 31 chr5 169788475 169788602 -29841548 - L2 LINE L2 0 3313 3164 828 176 0 13 chr5 169788678 169788831 -29841319 - AluJb SINE Alu -1 311 161 1792 102 109 0 chr5 169788870 169789144 -29841006 + AluY SINE Alu 1 304 -7 2031 118 0 24 chr5 169789315 169789646 -29840504 - AluSx SINE Alu 0 324 1 727 170 121 0 chr5 169789648 169789789 -29840361 - AluJb SINE Alu -13 299 142 324 0 0 0 chr5 169789793 169789829 -29840321 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 2015 129 0 0 chr5 169789832 169790112 -29840038 - AluSx SINE Alu -32 280 1 455 318 178 33 chr5 169790144 169790634 -29839516 - L2 LINE L2 -339 2975 2415 2228 97 3 13 chr5 169791218 169791527 -29838623 - AluSx SINE Alu -1 311 6 431 190 0 0 chr5 169791759 169791838 -29838312 + FRAM/FAM SINE Alu 1 78 -98 2218 145 74 20 chr5 169792893 169793299 -29836851 + MSTA LTR MaLR 1 428 0 278 77 0 0 chr5 169793691 169793730 -29836420 + Alu SINE Alu 254 292 -10 201 287 248 0 chr5 169794508 169794637 -29835513 + L2 LINE L2 3112 3272 0 560 329 63 25 chr5 169794768 169795005 -29835145 - MIR SINE MIR -4 258 13 1711 197 17 11 chr5 169795009 169795359 -29834791 - MLT1A1 LTR MaLR -4 361 10 270 330 82 26 chr5 169795387 169795581 -29834569 - L3 LINE CR1 -192 1385 1181 514 264 9 0 chr5 169795775 169795881 -29834269 + MIR SINE MIR 6 112 -150 709 254 105 9 chr5 169796002 169796230 -29833920 - MIR SINE MIR -11 251 2 267 385 0 0 chr5 169796953 169797075 -29833075 + MIR SINE MIR 30 151 -57 274 302 9 38 chr5 169797446 169797552 -29832598 + CT-rich Low_complexity Low_complexity 2 104 0 231 231 51 0 chr5 169797667 169797745 -29832405 - L1MC4 LINE L1 -1346 6696 6615 405 102 0 0 chr5 169797776 169797835 -29832315 + (TG)n Simple_repeat Simple_repeat 2 60 0 516 291 23 17 chr5 169798006 169798181 -29831969 - MIR3 SINE MIR -18 190 15 722 271 81 30 chr5 169798442 169798678 -29831472 - MIR SINE MIR -13 249 2 180 279 0 0 chr5 169798678 169798715 -29831435 + L2 LINE L2 3267 3303 -10 362 339 43 27 chr5 169798831 169799017 -29831133 - MER5A DNA MER1_type 0 189 1 319 274 75 0 chr5 169799709 169799815 -29830335 - L2 LINE L2 -15 3257 3144 244 195 0 46 chr5 169799964 169800051 -29830099 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 249 191 21 0 chr5 169800107 169800154 -29829996 - L2 LINE L2 -10 3303 3256 273 333 11 0 chr5 169801536 169801626 -29828524 - MIR3 SINE MIR -9 199 109 237 252 28 93 chr5 169801960 169802067 -29828083 - L3 LINE CR1 -2 1575 1476 1590 247 42 8 chr5 169802562 169802939 -29827211 + LTR16A LTR ERVL 61 450 0 511 240 0 0 chr5 169802996 169803092 -29827058 + MER58A DNA MER1_type 32 127 0 252 266 0 16 chr5 169803107 169803171 -29826979 + MER58A DNA MER1_type 162 224 0 249 286 42 0 chr5 169803493 169803568 -29826582 - MIR SINE MIR -53 155 79 193 286 0 18 chr5 169803756 169803812 -29826338 - MER5B DNA MER1_type -117 61 7 508 65 39 0 chr5 169803850 169803927 -29826223 - MADE1 DNA Mariner 0 80 1 594 376 54 22 chr5 169804010 169804533 -29825617 - L2 LINE L2 -2 3270 2737 2457 225 47 8 chr5 169805467 169806274 -29823876 - L1MDa LINE L1 -3280 3260 2430 649 172 0 0 chr5 169806269 169806385 -29823765 + L1MD2 LINE L1 4109 4224 -1922 * 334 174 14 14 chr5 169806390 169806459 -29823691 + L1MD2 LINE L1 5494 5562 -680 * 914 241 67 19 chr5 169806458 169806728 -29823422 + L1MD2 LINE L1 6068 6350 -9 332 284 187 13 chr5 169807018 169807173 -29822977 - MER5A DNA MER1_type -3 186 5 383 220 132 0 chr5 169807185 169807276 -29822874 + MIR SINE MIR 49 151 -111 305 160 10 130 chr5 169808321 169808421 -29821729 + L2 LINE L2 3226 3313 0 193 225 0 25 chr5 169808426 169808466 -29821684 - MIR SINE MIR -219 43 5 * 351 338 31 48 chr5 169808442 169808670 -29821480 - MIR SINE MIR -32 230 7 182 320 117 8 chr5 169810349 169810477 -29819673 + L2 LINE L2 2942 3083 -189 2283 104 3 0 chr5 169810931 169811228 -29818922 + AluSp SINE Alu 1 298 -15 181 150 25 25 chr5 169811570 169811610 -29818540 - L2 LINE L2 -590 2724 2685 408 229 49 137 chr5 169812327 169812510 -29817640 + MIR3 SINE MIR 36 202 -6 404 149 0 0 chr5 169812768 169812842 -29817308 + L1PA10 LINE L1 5098 5171 -975 16468 32 1 3 chr5 169812842 169815613 -29814537 + L1PA4 LINE L1 3399 6171 0 6338 79 27 2 chr5 169815613 169816592 -29813558 + L1PA10 LINE L1 5159 6159 -9 388 306 83 54 chr5 169816662 169817034 -29813116 + L1ME4a LINE L1 4182 4564 -1582 2278 109 3 0 chr5 169817054 169817358 -29812792 - AluSq SINE Alu -8 305 1 21 57 0 0 chr5 169817358 169817393 -29812757 + AT_rich Low_complexity Low_complexity 1 35 0 2710 287 65 13 chr5 169817534 169818608 -29811542 + L1MEc LINE L1 35 1164 -5232 508 238 27 0 chr5 169818617 169818764 -29811386 + L1MEc LINE L1 1565 1715 -4681 3307 220 80 21 chr5 169818912 169820002 -29810148 - L1MEc LINE L1 -2933 3282 2171 517 188 74 60 chr5 169819998 169820147 -29810003 - L1MEc LINE L1 -6210 186 36 * 1779 220 28 17 chr5 169820151 169820611 -29809539 + L1ME1 LINE L1 5697 6161 -5 359 270 220 21 chr5 169820794 169821131 -29809019 + L1ME4a LINE L1 5477 5880 -241 279 79 0 0 chr5 169821178 169821216 -29808934 + (TG)n Simple_repeat Simple_repeat 2 39 0 314 237 43 0 chr5 169821224 169821317 -29808833 + L1ME4a LINE L1 5974 6070 -51 660 335 137 18 chr5 169821750 169822204 -29807946 - L2 LINE L2 -2 3311 2804 195 227 185 34 chr5 169822350 169822469 -29807681 + MIR SINE MIR 80 216 -46 317 270 155 7 chr5 169823396 169823544 -29806606 - MIR SINE MIR 0 262 93 1445 204 29 19 chr5 169823792 169824101 -29806049 + MER58B DNA MER1_type 30 341 0 408 227 101 17 chr5 169825741 169825860 -29804290 - MER103 DNA DNA -16 150 22 649 226 138 6 chr5 169826048 169826207 -29803943 - MER5A DNA MER1_type 0 189 10 7786 114 19 6 chr5 169828261 169829398 -29800752 + Tigger1 DNA MER2_type 24 1175 -1243 980 123 7 0 chr5 169829401 169829539 -29800611 + FRAM SINE Alu 22 160 -16 6455 113 10 6 chr5 169829545 169830504 -29799646 + Tigger1 DNA MER2_type 1201 2163 -255 2443 158 15 0 chr5 169830504 169830909 -29799241 - L1MC1 LINE L1 -490 6123 5713 8589 206 11 2 chr5 169830910 169831475 -29798675 - L1PA15 LINE L1 0 6816 6257 2184 120 7 3 chr5 169831475 169831784 -29798366 - AluSx SINE Alu -2 310 1 8589 206 11 2 chr5 169831784 169833811 -29796339 - L1PA15 LINE L1 -559 6257 4217 1383 163 37 0 chr5 169833811 169834054 -29796096 - L1PA13 LINE L1 -1 6162 5909 6926 243 29 48 chr5 169834057 169834332 -29795818 - L1PA15 LINE L1 -2570 4227 3948 1675 57 0 0 chr5 169834332 169834544 -29795606 - L1PA4 LINE L1 0 6155 5944 6926 243 29 48 chr5 169834544 169836351 -29793799 - L1PA15 LINE L1 -2849 3948 2109 2107 125 0 0 chr5 169836351 169836651 -29793499 - AluSc SINE Alu 0 300 1 6926 243 29 48 chr5 169836651 169836797 -29793353 - L1PA15 LINE L1 -4688 2109 1962 2293 82 7 0 chr5 169836797 169837090 -29793060 + AluY SINE Alu 1 295 -16 6926 243 29 48 chr5 169837090 169838698 -29791452 - L1PA15 LINE L1 -4835 1962 1 495 205 41 0 chr5 169838711 169838833 -29791317 - L1MC1 LINE L1 -892 5721 5595 243 136 0 0 chr5 169838866 169838910 -29791240 + L1M LINE L1 5334 5377 -956 7213 225 33 24 chr5 169838920 169839495 -29790655 - L1MC1 LINE L1 -837 5589 5021 2335 88 0 7 chr5 169839495 169839801 -29790349 + AluY SINE Alu 1 304 -7 7213 225 33 24 chr5 169839801 169841176 -29788974 - L1MC1 LINE L1 -1405 5021 3620 3106 172 53 72 chr5 169841172 169841876 -29788274 - L1MC1 LINE L1 -5718 708 19 * 883 203 117 17 chr5 169841878 169842178 -29787972 - L1ME LINE L1 -553 5592 5263 413 305 139 35 chr5 169842272 169842618 -29787532 - L1ME LINE L1 -938 5191 4768 4880 42 3 3 chr5 169842618 169843209 -29786941 - LTR10C LTR ERV1 0 591 1 413 305 139 35 chr5 169843209 169843403 -29786747 - L1ME LINE L1 -1361 4768 4595 1771 257 50 35 chr5 169843685 169844202 -29785948 + L1MC4a LINE L1 6444 6968 -840 2362 221 79 8 chr5 169844204 169844815 -29785335 + L1MC4 LINE L1 7259 7912 -130 1082 288 108 9 chr5 169844898 169845543 -29784607 - L1ME LINE L1 -1530 4599 3891 1233 298 72 80 chr5 169845561 169846398 -29783752 - L1ME LINE L1 -5288 831 2 194 152 43 43 chr5 169846402 169846448 -29783702 + MIR SINE MIR 107 152 -110 639 298 21 28 chr5 169846551 169846836 -29783314 - L1ME LINE L1 -383 5738 5456 588 256 52 12 chr5 169847082 169847254 -29782896 - MER117 DNA MER1_type -4 193 15 288 0 0 0 chr5 169848514 169848546 -29781604 + (CA)n Simple_repeat Simple_repeat 2 33 0 960 209 0 0 chr5 169848727 169848899 -29781251 + FAM SINE Alu 2 173 -2 240 308 97 88 chr5 169849102 169849433 -29780717 + L2 LINE L2 2939 3272 0 340 291 93 46 chr5 169849468 169849619 -29780531 - MIR3 SINE MIR -9 199 42 231 302 123 0 chr5 169849663 169849769 -29780381 - L2 LINE L2 -12 3260 3142 788 152 18 23 chr5 169849863 169850034 -29780116 - MER96B DNA MER1_type? -239 178 9 227 326 95 11 chr5 169850788 169850883 -29779267 + MIR SINE MIR 23 125 -83 473 272 99 16 chr5 169851247 169851438 -29778712 + MIR SINE MIR 44 250 -12 268 229 72 36 chr5 169851476 169851559 -29778591 + L2 LINE L2 3185 3270 -2 218 217 0 50 chr5 169851586 169851646 -29778504 + GA-rich Low_complexity Low_complexity 4 60 0 4494 309 38 27 chr5 169851667 169853886 -29776264 - HERV16 LTR ERVL -1620 3865 1590 262 341 8 0 chr5 169853954 169854080 -29776070 - HERV16 LTR ERVL -3569 1427 1301 1171 278 65 35 chr5 169854754 169855275 -29774875 - MER34 LTR ERV1 -5 537 1 214 136 0 45 chr5 169855574 169855618 -29774532 + (CAGAGA)n Simple_repeat Simple_repeat 5 46 0 1733 152 76 0 chr5 169856352 169856642 -29773508 - AluJo SINE Alu 0 312 1 300 258 0 0 chr5 169856734 169856796 -29773354 + L2 LINE L2 3249 3310 -3 209 173 19 19 chr5 169857023 169857075 -29773075 + (TA)n Simple_repeat Simple_repeat 1 52 0 391 251 80 50 chr5 169857240 169857439 -29772711 - LTR16A1 LTR ERVL -1 456 252 520 241 23 23 chr5 169858114 169858247 -29771903 - MIR SINE MIR -4 258 126 2349 83 0 0 chr5 169858267 169858556 -29771594 + AluSc SINE Alu 1 289 -20 244 246 0 0 chr5 169858556 169858613 -29771537 + L1ME LINE L1 5607 5663 -458 2719 105 22 70 chr5 169858631 169859077 -29771073 + LTR8 LTR ERV1 1 425 -266 2118 92 11 7 chr5 169859078 169859388 -29770762 + AluSx SINE Alu 1 311 0 1108 157 0 0 chr5 169859422 169859581 -29770569 + AluSg/x SINE Alu 138 296 -16 225 133 0 0 chr5 169859582 169859612 -29770538 + LTR8 LTR ERV1 528 557 -134 631 110 12 0 chr5 169859612 169859694 -29770456 - AluSg/x SINE Alu -59 253 171 277 156 156 26 chr5 169859699 169859776 -29770374 - L1MC4 LINE L1 -1026 7016 6930 1254 125 45 0 chr5 169861746 169861946 -29768204 + Tigger7 DNA MER2_type 2279 2487 0 309 109 0 0 chr5 169862054 169862100 -29768050 + (T)n Simple_repeat Simple_repeat 1 46 0 192 288 288 22 chr5 169862139 169862278 -29767872 - MIR3 SINE MIR -21 187 12 1819 165 3 7 chr5 169862426 169862723 -29767427 + AluSx SINE Alu 1 296 -16 232 302 24 103 chr5 169863119 169863245 -29766905 + MIR3 SINE MIR 88 203 -5 5965 101 15 9 chr5 169863840 169864491 -29765659 - L1PA10 LINE L1 -1 6167 5508 2416 77 3 0 chr5 169864491 169864789 -29765361 + AluSg SINE Alu 5 303 -7 5965 101 15 9 chr5 169864789 169864996 -29765154 - L1PA10 LINE L1 -660 5508 5304 1364 149 21 0 chr5 169864996 169865231 -29764919 + L1PA10 LINE L1 5061 5300 -846 299 211 0 0 chr5 169865231 169865288 -29764862 + MIR SINE MIR 101 157 -105 1018 200 0 35 chr5 169865324 169865579 -29764571 + SVA Other Other 433 678 -708 22 0 0 0 chr5 169865693 169865715 -29764435 + AT_rich Low_complexity Low_complexity 1 22 0 197 229 33 33 chr5 169865717 169865778 -29764372 + MIR SINE MIR 191 251 -11 388 290 19 9 chr5 169866409 169866516 -29763634 - MIR SINE MIR -90 172 65 201 280 80 80 chr5 169866508 169866558 -29763592 + L2 LINE L2 3212 3261 -52 * 2049 179 5 42 chr5 169866558 169866937 -29763213 - MLT1A1 LTR MaLR 0 365 1 201 280 80 80 chr5 169866937 169866986 -29763164 + L2 LINE L2 3260 3311 -2 639 241 176 14 chr5 169867161 169867377 -29762773 - MIR SINE MIR 0 262 12 359 313 62 14 chr5 169868481 169868625 -29761525 - MIR SINE MIR -94 168 18 187 287 131 57 chr5 169868667 169868789 -29761361 + L2 LINE L2 3140 3270 -2 220 264 16 36 chr5 169868789 169868872 -29761278 + GA-rich Low_complexity Low_complexity 1 81 0 335 313 106 23 chr5 169869418 169869635 -29760515 - L1ME4a LINE L1 -177 5944 5710 1887 157 3 3 chr5 169869639 169869938 -29760212 + AluJb SINE Alu 1 299 -13 314 274 71 16 chr5 169870079 169870226 -29759924 - L1ME4a LINE L1 -463 5658 5536 1589 270 38 32 chr5 169871724 169872540 -29757610 + L1ME3A LINE L1 5135 5951 -219 370 336 110 0 chr5 169873091 169873237 -29756913 - MIR SINE MIR -72 190 29 499 157 0 0 chr5 169873548 169873631 -29756519 - L1MB1 LINE L1 -55 6134 6052 1128 146 4 67 chr5 169873633 169873872 -29756278 + L1MA10 LINE L1 6109 6332 -2 660 259 0 14 chr5 169874502 169874649 -29755501 + MIR SINE MIR 18 162 -100 243 344 10 31 chr5 169874762 169874858 -29755292 - MIR SINE MIR -65 143 50 202 366 0 14 chr5 169875846 169875917 -29754233 + L2 LINE L2 2994 3063 -209 793 201 45 0 chr5 169876526 169876680 -29753470 + LTR8 LTR ERV1 1 161 -530 900 203 6 0 chr5 169876683 169876841 -29753309 - MER72 LTR ERV1 -199 523 365 937 204 129 31 chr5 169876960 169877215 -29752935 + LTR8A LTR ERV1 319 598 -129 534 266 122 63 chr5 169877210 169877481 -29752669 + MLT1K LTR MaLR 302 588 0 * 220 288 51 0 chr5 169877504 169877563 -29752587 + L2 LINE L2 3193 3254 -59 5015 139 6 8 chr5 169877563 169878287 -29751863 + MER72 LTR ERV1 1 722 0 249 337 64 35 chr5 169879530 169879732 -29750418 + L2 LINE L2 2686 2893 -421 457 282 34 126 chr5 169879777 169880103 -29750047 + L2 LINE L2 2977 3272 0 219 36 0 0 chr5 169880186 169880214 -29749936 + (GA)n Simple_repeat Simple_repeat 2 29 0 1236 257 79 45 chr5 169880292 169880735 -29749415 - L3 LINE CR1 -1 1576 1119 568 344 5 11 chr5 169880792 169880978 -29749172 - MER5A DNA MER1_type -3 186 2 1597 159 0 71 chr5 169881504 169881813 -29748337 + AluJo SINE Alu 11 297 -15 550 314 61 15 chr5 169881880 169882071 -29748079 + MIR SINE MIR 3 191 -63 192 184 0 0 chr5 169882115 169882164 -29747986 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 183 259 74 0 chr5 169882208 169882262 -29747888 - MIR SINE MIR -106 156 99 206 223 202 75 chr5 169882470 169882564 -29747586 - L2 LINE L2 -1 3271 3166 * 770 247 123 23 chr5 169882543 169882851 -29747299 + L2 LINE L2 2975 3313 0 371 304 52 0 chr5 169884352 169884487 -29745663 + MIR SINE MIR 108 249 -13 2549 52 0 0 chr5 169884607 169884898 -29745252 - AluY SINE Alu -20 291 1 599 278 139 0 chr5 169885473 169885660 -29744490 - MIR SINE MIR 0 262 50 723 267 38 14 chr5 169885672 169885882 -29744268 - MIR SINE MIR 0 262 48 909 240 0 6 chr5 169886190 169886365 -29743785 - MER5A DNA MER1_type -10 179 6 235 266 104 104 chr5 169886591 169886705 -29743445 + L2 LINE L2 3036 3152 -120 2264 188 150 2 chr5 169886705 169887157 -29742993 + LTR53 LTR ERVL 1 519 0 235 266 104 104 chr5 169887157 169887234 -29742916 + L2 LINE L2 3151 3227 -45 1922 137 30 13 chr5 169887902 169888081 -29742069 - AluJo SINE Alu -7 305 118 242 0 61 0 chr5 169888081 169888114 -29742036 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1922 137 30 13 chr5 169888114 169888234 -29741916 - AluJo SINE Alu -194 118 1 336 286 41 58 chr5 169888236 169888407 -29741743 - MIR SINE MIR -72 190 23 469 241 48 28 chr5 169888783 169888928 -29741222 - MIR SINE MIR -12 250 103 462 195 88 146 chr5 169888935 169889196 -29740954 - MER112 DNA MER1_type -13 247 2 340 294 24 0 chr5 169889196 169889281 -29740869 - MIR SINE MIR -164 98 12 944 157 32 149 chr5 169889284 169889391 -29740759 - MER33 DNA MER1_type -2261 324 206 2112 120 3 0 chr5 169889391 169889683 -29740467 + AluSc SINE Alu 1 293 -16 944 157 32 149 chr5 169889683 169889706 -29740444 - MER33 DNA MER1_type -2379 206 182 1748 84 22 0 chr5 169889706 169889932 -29740218 + L1PA12 LINE L1 5937 6167 -1 944 157 32 149 chr5 169889932 169890175 -29739975 - MER33 DNA MER1_type -2403 182 1 336 48 0 0 chr5 169890249 169890291 -29739859 + (TA)n Simple_repeat Simple_repeat 2 43 0 2454 91 0 3 chr5 169890291 169890599 -29739551 - AluSq SINE Alu -6 307 1 2226 164 3 3 chr5 169892313 169892680 -29737470 + L1MB5 LINE L1 5710 6076 -98 230 245 113 139 chr5 169893694 169893730 -29736420 - MIR SINE MIR -111 151 116 2912 19 0 0 chr5 169893730 169894048 -29736102 + AluYb8 SINE Alu 1 318 0 230 245 113 139 chr5 169894048 169894162 -29735988 - MIR SINE MIR -146 116 5 387 325 14 48 chr5 169894700 169894909 -29735241 + MLT1K LTR MaLR 43 244 -344 381 281 118 13 chr5 169894964 169895117 -29735033 + MLT1K LTR MaLR 420 588 0 587 177 111 111 chr5 169895117 169895315 -29734835 - MIR SINE MIR -51 211 14 235 149 164 15 chr5 169896105 169896172 -29733978 + MIR SINE MIR 20 96 -112 562 323 36 9 chr5 169896239 169896459 -29733691 + MIR SINE MIR 5 230 -32 2212 79 7 0 chr5 169897126 169897430 -29732720 + AluY SINE Alu 1 306 0 444 347 74 12 chr5 169897889 169898131 -29732019 + LTR16B LTR ERVL 134 390 -74 488 287 25 13 chr5 169898903 169899111 -29731039 - MIR SINE MIR -14 248 42 224 344 42 0 chr5 169899125 169899221 -29730929 + L2 LINE L2 3158 3257 -15 2260 107 3 0 chr5 169900031 169900329 -29729821 + AluSp SINE Alu 1 299 -14 222 304 122 51 chr5 169900526 169900740 -29729410 + MIR SINE MIR 20 248 -14 589 282 100 9 chr5 169900874 169901094 -29729056 + MIR SINE MIR 11 250 -12 298 323 116 19 chr5 169902825 169903026 -29727124 - MIR3 SINE MIR -40 222 4 652 279 153 3 chr5 169903038 169903466 -29726684 + LTR33 LTR ERVL 3 513 -8 298 237 66 26 chr5 169904249 169904325 -29725825 + L2 LINE L2 3194 3272 0 547 292 129 19 chr5 169905499 169905708 -29724442 + MIR SINE MIR 10 241 -21 921 219 153 62 chr5 169905783 169906234 -29723916 - MER34C LTR ERV1 -81 504 13 759 259 46 34 chr5 169906573 169906835 -29723315 - MLT1K LTR MaLR -2 586 322 1694 200 3 13 chr5 169909377 169909682 -29720468 + AluJb SINE Alu 1 302 -10 232 301 111 33 chr5 169910206 169910359 -29719791 + L2 LINE L2 2874 3038 -275 252 235 0 0 chr5 169910930 169910998 -29719152 + (CA)n Simple_repeat Simple_repeat 1 68 0 531 309 24 6 chr5 169911166 169911334 -29718816 + MIR SINE MIR 20 190 -72 359 235 0 0 chr5 169912134 169912202 -29717948 - L2 LINE L2 0 3313 3246 222 156 0 0 chr5 169912269 169912314 -29717836 + (TG)n Simple_repeat Simple_repeat 2 46 0 2306 96 0 0 chr5 169912425 169912717 -29717433 + AluSq SINE Alu 1 292 -21 256 368 111 0 chr5 169912746 169912863 -29717287 - L2 LINE L2 -217 3096 2967 288 259 25 25 chr5 169913165 169913246 -29716904 + (CATA)n Simple_repeat Simple_repeat 2 82 0 190 161 89 89 chr5 169913610 169913666 -29716484 + L2 LINE L2 3169 3224 -89 369 62 0 0 chr5 169914709 169914757 -29715393 + (TC)n Simple_repeat Simple_repeat 1 48 0 297 281 58 16 chr5 169914776 169914897 -29715253 + MIR SINE MIR 127 252 -10 689 294 28 32 chr5 169915387 169915635 -29714515 + MIR SINE MIR 3 249 -13 313 249 76 76 chr5 169916640 169916837 -29713313 - MIR SINE MIR 0 262 66 2477 96 0 0 chr5 169917036 169917348 -29712802 - AluSx SINE Alu 0 312 1 2445 77 3 0 chr5 169917375 169917672 -29712478 - AluSp SINE Alu -15 298 1 462 350 20 29 chr5 169917672 169917721 -29712429 - MIR SINE MIR 0 262 214 2377 118 32 97 chr5 169917721 169918152 -29711998 + MER57A LTR ERV1 1 403 0 462 350 20 29 chr5 169918152 169918348 -29711802 - MIR SINE MIR -48 214 19 181 219 31 78 chr5 169918908 169918972 -29711178 + L2 LINE L2 3188 3248 -24 816 251 72 13 chr5 169920205 169920440 -29709710 - MIR SINE MIR -3 259 11 459 170 28 142 chr5 169920563 169920704 -29709446 - L2 LINE L2 -4 3268 3144 219 299 110 16 chr5 169920808 169920935 -29709215 + MIR3 SINE MIR 17 155 -53 781 286 0 16 chr5 169921121 169921309 -29708841 - MER82 DNA MER2_type 0 653 469 500 157 244 0 chr5 169921309 169921424 -29708726 + MER39 LTR ERV1 3 145 -562 277 297 77 0 chr5 169921428 169921519 -29708631 + MIR SINE MIR 95 192 -70 1215 232 77 71 chr5 169921521 169921587 -29708563 - LTR16B LTR ERVL 0 464 400 900 186 12 0 chr5 169921587 169921759 -29708391 + L1MB4 LINE L1 6001 6174 -6 1215 232 77 71 chr5 169921759 169922145 -29708005 - LTR16B LTR ERVL -64 400 9 2774 66 33 3 chr5 169922681 169923045 -29707105 - L1PA13 LINE L1 -365 5803 5429 2348 103 0 18 chr5 169923045 169923372 -29706778 + L1PA13 LINE L1 5836 6159 -4 2837 0 0 3 chr5 169923381 169923685 -29706465 + AluYa5 SINE Alu 1 303 -8 251 146 36 55 chr5 169923685 169923740 -29706410 - L1MC/D LINE L1 -2246 5749 5696 196 393 12 25 chr5 169926537 169926700 -29703450 + L2 LINE L2 2899 3059 -213 921 306 146 44 chr5 169926905 169927990 -29702160 - L2 LINE L2 -201 3071 1862 192 275 0 0 chr5 169928601 169928641 -29701509 - MIR SINE MIR -3 259 220 191 281 18 0 chr5 169928671 169928728 -29701422 + L2 LINE L2 2716 2773 -541 570 175 87 32 chr5 169928822 169928948 -29701202 + FLAM_C SINE Alu 1 133 0 351 0 0 0 chr5 169929057 169929096 -29701054 + (TG)n Simple_repeat Simple_repeat 2 40 0 2133 240 70 61 chr5 169929393 169930150 -29700000 + LTR41 LTR ERVL 3 766 -7 198 71 0 0 chr5 169930176 169930204 -29699946 + (CA)n Simple_repeat Simple_repeat 1 28 0 429 278 26 0 chr5 169930294 169930409 -29699741 - MIR SINE MIR -61 201 84 858 192 0 6 chr5 169930451 169930607 -29699543 - LTR32 LTR ERVL 0 471 317 1995 158 25 6 chr5 169930703 169931025 -29699125 - LTR32 LTR ERVL -122 349 22 2122 95 0 30 chr5 169931107 169931412 -29698738 - AluSq SINE Alu 0 313 18 199 344 66 0 chr5 169931428 169931489 -29698661 - MIR SINE MIR -194 68 4 264 229 219 10 chr5 169933233 169933329 -29696821 - MIR SINE MIR -108 154 39 2045 139 7 0 chr5 169933949 169934244 -29695906 - AluSg SINE Alu -13 297 1 1936 202 83 9 chr5 169934340 169934775 -29695375 + MLT1C LTR MaLR 1 467 0 982 178 86 0 chr5 169934799 169934973 -29695177 - MER5A DNA MER1_type 0 189 1 335 270 66 15 chr5 169935217 169935354 -29694796 + MIR SINE MIR 119 262 0 329 329 50 43 chr5 169935870 169936031 -29694119 - L2 LINE L2 -9 3263 3102 1214 129 0 0 chr5 169936350 169936520 -29693630 + AluSg/x SINE Alu 140 309 -3 226 309 110 31 chr5 169937369 169937560 -29692590 - L2 LINE L2 -12 3301 3096 197 211 84 28 chr5 169938925 169938996 -29691154 - MER5C DNA MER1_type -249 75 1 599 314 68 5 chr5 169939006 169939213 -29690937 + MIR SINE MIR 19 238 -24 215 306 91 58 chr5 169939400 169939521 -29690629 + MIR SINE MIR 17 141 -67 2080 49 0 8 chr5 169940376 169940621 -29689529 + AluY SINE Alu 54 296 -15 386 259 24 0 chr5 169940735 169940820 -29689330 - MER5A DNA MER1_type -77 112 26 246 261 97 72 chr5 169941153 169941360 -29688790 + L2 LINE L2 2501 2712 -602 1537 247 48 16 chr5 169941367 169941808 -29688342 + L1MEc LINE L1 41 495 -5901 607 183 26 17 chr5 169941838 169941953 -29688197 + MER5A DNA MER1_type 74 189 0 2491 24 7 0 chr5 169942101 169942388 -29687762 - AluYb8 SINE Alu 0 318 30 372 205 0 26 chr5 169942388 169942466 -29687684 - MER5A DNA MER1_type -113 76 1 268 381 37 8 chr5 169942584 169942718 -29687432 - L3 LINE CR1 -117 1460 1323 1681 145 35 19 chr5 169942945 169943255 -29686895 + L1PB2 LINE L1 1 315 -6548 2345 234 79 25 chr5 169943256 169943940 -29686210 - MER50 LTR ERV1 0 734 14 726 218 0 0 chr5 169943946 169944088 -29686062 + L1PB2 LINE L1 313 454 -6409 14982 191 15 8 chr5 169944103 169946193 -29683957 + L1PB2 LINE L1 2423 4497 -2370 2789 98 8 16 chr5 169946193 169946571 -29683579 + THE1C LTR MaLR 1 375 0 14982 191 15 8 chr5 169946571 169948896 -29681254 + L1PB2 LINE L1 4497 6867 0 374 192 13 26 chr5 169948931 169949009 -29681141 - MER5A DNA MER1_type -50 139 63 288 348 154 14 chr5 169949440 169949661 -29680489 - MIR SINE MIR -3 259 8 242 317 0 37 chr5 169950212 169950373 -29679777 + GA-rich Low_complexity Low_complexity 3 157 0 266 256 70 31 chr5 169950451 169950580 -29679570 - MIR3 SINE MIR -47 161 28 281 328 91 44 chr5 169953419 169953698 -29676452 + L2 LINE L2 2549 2854 -460 1965 157 0 10 chr5 169953698 169954003 -29676147 - AluJo SINE Alu -10 302 1 281 328 91 44 chr5 169954003 169954131 -29676019 + L2 LINE L2 2854 2975 -339 883 313 30 4 chr5 169954871 169955139 -29675011 - MLT1I LTR MaLR 0 409 135 231 275 58 0 chr5 169955258 169955327 -29674823 - Charlie8 DNA MER1_type -5 2412 2340 2052 109 20 14 chr5 169955465 169955758 -29674392 - AluSx SINE Alu -17 295 1 552 256 53 43 chr5 169957241 169957448 -29672702 - L2 LINE L2 -1 3312 3104 1328 145 33 9 chr5 169957504 169957718 -29672432 - MER20 DNA MER1_type 0 219 1 333 307 80 20 chr5 169957786 169957936 -29672214 + MIR SINE MIR 60 218 -44 243 341 141 12 chr5 169957995 169958165 -29671985 - MIR SINE MIR -67 195 4 1673 193 0 3 chr5 169959056 169959346 -29670804 + AluJo SINE Alu 1 289 -23 815 286 128 23 chr5 169959560 169959958 -29670192 + L1MC4a LINE L1 5506 5945 -1863 255 292 0 0 chr5 169959966 169960050 -29670100 + (CATA)n Simple_repeat Simple_repeat 1 84 0 281 369 89 14 chr5 169960681 169960895 -29669255 + L2 LINE L2 3038 3267 -5 281 336 65 0 chr5 169961045 169961152 -29668998 + MIR SINE MIR 78 191 -71 1012 182 94 0 chr5 169961180 169961372 -29668778 + Ricksha DNA DNA 90 299 -2947 * 2859 169 35 19 chr5 169961365 169961885 -29668265 + Ricksha DNA DNA 1824 2351 -895 406 119 17 0 chr5 169961881 169961940 -29668210 - Ricksha DNA DNA -1156 98 39 * 551 277 68 32 chr5 169962105 169962359 -29667791 + MIR SINE MIR 5 262 0 245 312 165 3 chr5 169962651 169962809 -29667341 - MIR SINE MIR -62 146 4 931 216 178 30 chr5 169962872 169963271 -29666879 - LTR37B LTR ERV1 -2 466 9 705 243 30 84 chr5 169963276 169963385 -29666765 - MIR SINE MIR -11 251 138 19167 51 0 0 chr5 169963385 169966396 -29663754 - L1PA6 LINE L1 -6 6148 3138 705 243 30 84 chr5 169966396 169966549 -29663601 - MIR SINE MIR -124 138 3 248 200 133 67 chr5 169966569 169966659 -29663491 + L2 LINE L2 3163 3258 -14 198 176 29 0 chr5 169966711 169966745 -29663405 - L2 LINE L2 -21 3292 3258 219 182 45 0 chr5 169966816 169966860 -29663290 - L2 LINE L2 -86 3186 3141 245 343 0 29 chr5 169967880 169967985 -29662165 + L2 LINE L2 3155 3256 -16 1040 175 23 0 chr5 169968693 169968870 -29661280 + MER58A DNA MER1_type 44 224 0 441 297 82 16 chr5 169969597 169969779 -29660371 - L2 LINE L2 -1 3312 3119 188 293 0 0 chr5 169969822 169969863 -29660287 + L2 LINE L2 3204 3244 -28 615 310 52 9 chr5 169970123 169970355 -29659795 + MIR SINE MIR 13 254 -8 662 231 31 12 chr5 169970357 169970517 -29659633 + MIR SINE MIR 100 262 0 333 259 47 0 chr5 169970925 169971010 -29659140 + L2 LINE L2 3183 3271 -42 375 309 100 19 chr5 169971114 169971373 -29658777 + MLT1K LTR MaLR 143 422 -166 615 213 55 18 chr5 169971598 169971762 -29658388 + Ricksha DNA DNA 1 170 -1876 * 8348 153 28 7 chr5 169971659 169973042 -29657108 - Ricksha DNA DNA -13 3233 1821 1054 149 0 6 chr5 169973040 169973208 -29656942 - Ricksha DNA DNA -2957 289 123 * 603 264 14 7 chr5 169973210 169973358 -29656792 - MIR SINE MIR -85 177 29 449 280 45 8 chr5 169973387 169973519 -29656631 + MER5A DNA MER1_type 8 144 -45 240 35 0 0 chr5 169974390 169974419 -29655731 + (TTG)n Simple_repeat Simple_repeat 2 30 0 627 267 31 58 chr5 169976504 169976691 -29653459 - MIR SINE MIR -10 252 72 1809 166 3 23 chr5 169976691 169976993 -29653157 + AluJb SINE Alu 3 298 -14 627 267 31 58 chr5 169976993 169977063 -29653087 - MIR SINE MIR -190 72 2 502 191 130 0 chr5 169977464 169977579 -29652571 - MER5A DNA MER1_type -1 188 59 921 146 23 58 chr5 169977587 169977758 -29652392 + FRAM SINE Alu 10 174 -2 352 236 14 0 chr5 169977772 169977844 -29652306 - MER5A DNA MER1_type -113 76 4 327 284 12 0 chr5 169977905 169977986 -29652164 - MIR3 SINE MIR -51 157 76 303 28 0 0 chr5 169978048 169978084 -29652066 + (TA)n Simple_repeat Simple_repeat 1 36 0 * 381 75 0 0 chr5 169978083 169978136 -29652014 + (CA)n Simple_repeat Simple_repeat 2 54 0 227 262 87 68 chr5 169978468 169978571 -29651579 + MIR3 SINE MIR 90 194 -14 23 54 0 0 chr5 169978867 169978904 -29651246 + AT_rich Low_complexity Low_complexity 1 37 0 826 124 12 62 chr5 169980034 169980195 -29649955 - MER39B LTR ERV1 0 653 501 1616 138 67 4 chr5 169980195 169980463 -29649687 + MER49 LTR ERV1 1 285 -638 1208 207 0 9 chr5 169980525 169980757 -29649393 + MER4D LTR ERV1 549 778 -125 1612 195 0 20 chr5 169980757 169981059 -29649091 + AluJb SINE Alu 1 296 -16 50 80 0 0 chr5 169981064 169981177 -29648973 + AT_rich Low_complexity Low_complexity 1 113 0 2471 131 11 0 chr5 169981204 169981562 -29648588 - L1PB1 LINE L1 -8 6859 6498 325 53 32 53 chr5 169981573 169981668 -29648482 + (TA)n Simple_repeat Simple_repeat 2 94 0 12019 185 9 18 chr5 169981668 169982689 -29647461 - L1PB1 LINE L1 -360 6507 5478 2361 117 0 0 chr5 169982689 169982997 -29647153 - AluSx SINE Alu -2 310 3 12019 185 9 18 chr5 169982997 169985036 -29645114 - L1PB1 LINE L1 -1389 5478 3477 1176 84 13 0 chr5 169985055 169985209 -29644941 - L1PA7 LINE L1 -86 6068 5913 1885 156 44 6 chr5 169985806 169986145 -29644005 - L1PB1 LINE L1 -3375 3487 3136 7823 135 45 13 chr5 169986618 169988064 -29642086 - L1PB1 LINE L1 -3735 3127 1629 3451 125 183 141 chr5 169988064 169989101 -29641049 + pTR5 LTR ERV1 375 2427 -11 1662 219 86 12 chr5 169989102 169990504 -29639646 - L1PB1 LINE L1 -5203 1660 6 696 203 14 21 chr5 169990535 169990678 -29639472 + MER4D LTR ERV1 762 903 0 3282 133 14 6 chr5 169990682 169991178 -29638972 - MER39B LTR ERV1 -153 500 1 2618 158 39 2 chr5 169991280 169991691 -29638459 - MSTB LTR MaLR 0 426 1 2058 96 0 0 chr5 169992274 169992535 -29637615 - AluSq SINE Alu -15 298 38 367 193 45 23 chr5 169992633 169992721 -29637429 + MER88 LTR ERVL 79 168 -296 * 1216 252 61 35 chr5 169992645 169993069 -29637081 - MER74A LTR ERVL -70 488 54 1572 168 128 31 chr5 169993083 169993314 -29636836 - MLT1A1 LTR MaLR 0 365 91 2491 127 72 12 chr5 169993314 169993715 -29636435 - MSTB LTR MaLR 0 426 2 1572 168 128 31 chr5 169993715 169993810 -29636340 - MLT1A1 LTR MaLR -274 91 7 1124 142 100 0 chr5 169994468 169994658 -29635492 - MER3 DNA MER1_type 0 209 1 222 353 76 8 chr5 169994813 169994932 -29635218 + MIR SINE MIR 10 136 -126 516 281 103 50 chr5 169995054 169995392 -29634758 + MLT1L LTR MaLR 210 486 -25 1161 269 25 72 chr5 169995431 169995948 -29634202 - MLT1J LTR MaLR -10 501 9 380 207 228 7 chr5 169996109 169996254 -29633896 + MER113 DNA MER1_type? 1 177 -344 251 252 30 92 chr5 169996833 169996964 -29633186 + MIR SINE MIR 99 221 -41 923 239 83 0 chr5 169997016 169997246 -29632904 + MIR SINE MIR 13 261 -1 291 243 14 43 chr5 169997670 169997787 -29632363 + MER96 DNA MER1_type? 1 154 -21 463 232 268 0 chr5 169997787 169997808 -29632342 + MER96 DNA MER1_type 1 175 0 1645 142 70 67 chr5 169998870 169999244 -29630906 + THE1C LTR MaLR 1 375 0 1731 240 33 4 chr5 169999323 169999836 -29630314 + L1MB7 LINE L1 5654 6181 -3 315 49 0 0 chr5 169999882 169999923 -29630227 + (CA)n Simple_repeat Simple_repeat 2 42 0 240 109 22 65 chr5 169999923 169999969 -29630181 + MIR SINE MIR 219 262 0 1053 139 92 0 chr5 170001135 170001308 -29628842 + MER5A DNA MER1_type 1 189 0 4107 145 23 6 chr5 170001750 170002707 -29627443 + L1MA4 LINE L1 4588 5575 -725 1805 133 21 11 chr5 170002707 170003034 -29627116 + AluSx SINE Alu 1 330 0 4107 145 23 6 chr5 170003034 170003485 -29626665 + L1MA4 LINE L1 5575 6017 -283 348 153 71 0 chr5 170003503 170003588 -29626562 + L1MB3 LINE L1 6091 6181 -2 21 0 0 0 chr5 170003674 170003695 -29626455 + AT_rich Low_complexity Low_complexity 1 21 0 1320 218 99 84 chr5 170003944 170004671 -29625479 + L2 LINE L2 2557 3311 -2 189 232 161 0 chr5 170004691 170004747 -29625403 - L2 LINE L2 -50 3222 3158 2299 89 58 19 chr5 170006711 170007072 -29623078 - THE1C LTR MaLR 0 375 1 218 196 59 10 chr5 170007094 170007196 -29622954 + (TA)n Simple_repeat Simple_repeat 1 107 0 517 303 87 15 chr5 170007590 170007785 -29622365 + MIR SINE MIR 17 225 -37 251 335 19 43 chr5 170008924 170009085 -29621065 - MLT1K LTR MaLR -329 259 103 182 317 33 17 chr5 170009403 170009463 -29620687 + L2 LINE L2 2785 2845 -469 2242 119 0 0 chr5 170009561 170009864 -29620286 - AluSc SINE Alu -2 307 5 1247 257 74 74 chr5 170009890 170010368 -29619782 - L1MCc LINE L1 -4259 2863 2386 180 0 0 0 chr5 170010368 170010388 -29619762 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1558 138 9 0 chr5 170010395 170010626 -29619524 - AluSx SINE Alu -75 237 5 1247 257 74 74 chr5 170010626 170011596 -29618554 - L1MCc LINE L1 -4742 2380 1199 1402 295 33 23 chr5 170011684 170012257 -29617893 - L1MCc LINE L1 -5812 611 33 1622 170 26 85 chr5 170012257 170012645 -29617505 - MLT1A1 LTR MaLR 0 365 1 644 289 137 0 chr5 170012673 170012877 -29617273 - MIR SINE MIR 0 262 31 252 303 37 28 chr5 170012908 170013017 -29617133 + L2 LINE L2 3163 3272 0 2390 106 0 0 chr5 170013019 170013322 -29616828 + AluSg SINE Alu 1 303 -7 210 171 0 0 chr5 170013472 170013513 -29616637 + T-rich Low_complexity Low_complexity 1 41 0 26 50 0 0 chr5 170014317 170014357 -29615793 + AT_rich Low_complexity Low_complexity 1 40 0 607 246 50 17 chr5 170014376 170014555 -29615595 - MIR SINE MIR -64 198 14 214 310 129 0 chr5 170014645 170014761 -29615389 + L2 LINE L2 2132 2262 -1052 421 273 101 0 chr5 170014790 170014929 -29615221 - L2 LINE L2 -3 3310 3158 754 292 20 10 chr5 170014951 170015252 -29614898 - L1MC/D LINE L1 -2004 5804 5501 2150 35 15 0 chr5 170015337 170015596 -29614554 + L1PA5 LINE L1 5886 6148 -6 2235 106 0 16 chr5 170015770 170016082 -29614068 + AluSc SINE Alu 1 307 -2 37 0 0 0 chr5 170016204 170016241 -29613909 + AT_rich Low_complexity Low_complexity 1 37 0 42178 39 2 1 chr5 170016241 170022391 -29607759 - L1PA3 LINE L1 -3 6152 2 560 150 83 0 chr5 170022398 170022518 -29607632 - L1MA4 LINE L1 -6 6294 6165 1113 248 162 39 chr5 170022706 170023201 -29606949 - MLT1G1 LTR MaLR 0 595 1 352 328 35 23 chr5 170023799 170023970 -29606180 - MIR SINE MIR -56 206 34 188 217 116 43 chr5 170023965 170024034 -29606116 - MIR3 SINE MIR -48 160 87 * 675 296 41 75 chr5 170024615 170025081 -29605069 + LTR67 LTR ERVL 97 546 -11 413 152 0 0 chr5 170025401 170025467 -29604683 + THE1C LTR MaLR 1 66 -309 344 137 32 63 chr5 170025434 170025529 -29604621 + THE1B LTR MaLR 271 362 -2 * 297 388 117 5 chr5 170025630 170025844 -29604306 + L2 LINE L2 2596 2833 -481 30 0 0 0 chr5 170025923 170025953 -29604197 + AT_rich Low_complexity Low_complexity 1 30 0 1613 195 14 0 chr5 170025953 170026235 -29603915 - AluJo SINE Alu -26 286 1 2238 114 0 0 chr5 170026238 170026528 -29603622 - AluSc SINE Alu -19 290 1 809 144 30 15 chr5 170026594 170026726 -29603424 + FRAM SINE Alu 36 169 -7 378 375 38 0 chr5 170026822 170026982 -29603168 - MIR SINE MIR -16 246 81 41354 45 3 2 chr5 170026985 170033134 -29597016 + L1PA4 LINE L1 1 6154 -1 32 0 0 0 chr5 170033135 170033167 -29596983 + AT_rich Low_complexity Low_complexity 1 32 0 285 350 15 29 chr5 170033410 170033547 -29596603 - MER5A DNA MER1_type -27 162 28 255 329 51 15 chr5 170033788 170033925 -29596225 + MER117 DNA MER1_type 20 161 -36 738 256 35 16 chr5 170034558 170034812 -29595338 + MIR SINE MIR 2 260 -2 279 218 209 45 chr5 170034838 170034948 -29595202 + MIR3 SINE MIR 45 172 -36 297 310 60 69 chr5 170035949 170036181 -29593969 + MLT1H LTR MaLR 125 354 -195 226 385 45 6 chr5 170037107 170037263 -29592887 + L1MEc LINE L1 221 382 -6014 234 228 76 35 chr5 170037732 170037877 -29592273 + L1MEc LINE L1 653 803 -5402 1509 229 79 30 chr5 170037912 170038305 -29591845 + L1ME1 LINE L1 5631 6057 -109 2080 108 7 0 chr5 170038305 170038610 -29591540 + AluSx SINE Alu 1 307 0 1509 229 79 30 chr5 170038610 170038706 -29591444 + L1ME1 LINE L1 6057 6147 -19 1148 259 94 56 chr5 170038757 170039406 -29590744 + L1MC4a LINE L1 5277 5945 -1863 270 251 29 103 chr5 170040071 170040246 -29589904 - MIR SINE MIR 0 262 101 362 256 45 60 chr5 170040272 170040405 -29589745 - MIR SINE MIR -119 143 13 642 270 154 12 chr5 170040422 170040741 -29589409 - L3 LINE CR1 -5 1572 1209 29 0 0 0 chr5 170040806 170040835 -29589315 + AT_rich Low_complexity Low_complexity 1 29 0 1150 190 85 23 chr5 170040870 170041177 -29588973 - L1ME2 LINE L1 -9 6155 5830 259 188 16 47 chr5 170041179 170041243 -29588907 - Tigger5 DNA MER2_type 0 2323 2262 383 225 22 0 chr5 170041292 170041381 -29588769 - Tigger5 DNA MER2_type -2231 92 2 727 196 54 5 chr5 170041452 170041636 -29588514 - L1ME2 LINE L1 -377 5787 5595 389 231 29 10 chr5 170041678 170041782 -29588368 + L1ME LINE L1 5414 5519 -645 336 273 191 24 chr5 170041813 170042022 -29588128 - L3 LINE CR1 -504 1073 830 337 337 34 51 chr5 170042262 170042437 -29587713 - MIR SINE MIR -71 191 20 553 249 173 10 chr5 170042723 170042920 -29587230 + MIR SINE MIR 22 250 -12 279 79 0 0 chr5 170042928 170042966 -29587184 + (CAT)n Simple_repeat Simple_repeat 2 39 0 907 192 17 17 chr5 170044532 170044709 -29585441 + MER45A DNA AcHobo 2 178 0 297 75 0 0 chr5 170044719 170044759 -29585391 + (CA)n Simple_repeat Simple_repeat 2 41 0 442 286 231 0 chr5 170044823 170045026 -29585124 + MIR SINE MIR 6 255 -7 357 233 75 7 chr5 170045188 170045334 -29584816 + MER113 DNA MER1_type? 1 156 -365 373 310 0 9 chr5 170045723 170045836 -29584314 + MER5A DNA MER1_type 1 112 -77 362 290 61 3 chr5 170045905 170046099 -29584051 - MIR SINE MIR 0 262 3 359 351 13 7 chr5 170046474 170046625 -29583525 + L3 LINE CR1 1425 1576 -1 303 209 29 9 chr5 170046681 170046786 -29583364 + GA-rich Low_complexity Low_complexity 2 108 0 23 33 0 0 chr5 170047097 170047127 -29583023 + AT_rich Low_complexity Low_complexity 1 30 0 2442 135 14 49 chr5 170047487 170047932 -29582218 + MSTB1 LTR MaLR 1 429 -3 2319 84 0 43 chr5 170048021 170048344 -29581806 - AluY SINE Alu -2 309 1 2078 121 13 3 chr5 170048687 170048994 -29581156 - AluSx SINE Alu 0 312 3 302 351 77 40 chr5 170049039 170049392 -29580758 - HAL1 LINE L1 -1047 1460 1095 354 356 14 14 chr5 170049757 170049903 -29580247 - Charlie8 DNA MER1_type -2271 146 1 305 219 12 0 chr5 170050270 170050352 -29579798 - Charlie5 DNA MER1_type -164 2448 2366 2302 103 0 3 chr5 170050413 170050713 -29579437 - AluSx SINE Alu -13 299 1 845 179 71 5 chr5 170051444 170051656 -29578494 + MER33 DNA MER1_type 23 248 -76 731 266 135 25 chr5 170052039 170052484 -29577666 + L1ME4a LINE L1 5354 5847 -274 211 299 75 51 chr5 170052498 170052792 -29577358 + L2 LINE L2 2644 2944 -370 180 298 0 0 chr5 170053056 170053103 -29577047 + L2 LINE L2 3226 3272 0 232 196 155 41 chr5 170053204 170053301 -29576849 + L1ME4a LINE L1 5961 6068 -53 25 0 0 28 chr5 170053329 170053351 -29576799 + AT_rich Low_complexity Low_complexity 1 23 -12 2561 89 14 3 chr5 170053351 170053698 -29576452 + L1PA13 LINE L1 5813 6163 0 25 0 0 28 chr5 170053698 170053711 -29576439 + AT_rich Low_complexity Low_complexity 23 35 0 295 323 32 48 chr5 170054409 170054533 -29575617 - L2 LINE L2 -2 3270 3149 1927 142 45 3 chr5 170054621 170054910 -29575240 - AluSx SINE Alu -11 301 1 321 259 27 147 chr5 170055519 170055634 -29574516 + L3 LINE CR1 1176 1253 -324 4173 98 11 2 chr5 170055634 170056203 -29573947 + L1PA11 LINE L1 5599 6172 -2 321 259 27 147 chr5 170056203 170056311 -29573839 + L3 LINE CR1 1253 1372 -205 197 205 0 0 chr5 170056812 170056851 -29573299 + L2 LINE L2 3216 3254 -18 400 328 109 30 chr5 170057517 170057846 -29572304 - L3 LINE CR1 -12 1565 1211 24 77 0 0 chr5 170058897 170058949 -29571201 + AT_rich Low_complexity Low_complexity 1 52 0 3203 129 62 6 chr5 170059020 170059532 -29570618 + LTR1B LTR ERV1 1 541 -285 742 180 0 16 chr5 170059532 170059660 -29570490 + LTR1B LTR ERV1 701 826 0 248 354 0 0 chr5 170061018 170061097 -29569053 - L2 LINE L2 0 3313 3235 652 284 35 26 chr5 170061319 170061551 -29568599 + MIR SINE MIR 17 250 -12 249 296 122 0 chr5 170061572 170061687 -29568463 - L2 LINE L2 -317 2955 2827 627 244 45 11 chr5 170062486 170062662 -29567488 + MIR SINE MIR 16 197 -65 1692 197 50 64 chr5 170062663 170063181 -29566969 + MER113 DNA MER1_type? 11 521 0 3840 171 32 14 chr5 170063543 170064292 -29565858 + LTR1B LTR ERV1 1 783 -2 289 263 121 10 chr5 170064411 170064510 -29565640 + L2 LINE L2 3099 3208 -64 431 111 0 12 chr5 170064559 170064640 -29565510 + (GGAA)n Simple_repeat Simple_repeat 4 83 0 261 228 119 5 chr5 170065899 170066033 -29564117 + MIR SINE MIR 104 256 -6 9441 25 2 3 chr5 170066061 170067163 -29562987 - L1PA3 LINE L1 -1419 4727 3627 7832 17 3 1 chr5 170067163 170068597 -29561553 + L1PA3 LINE L1 4750 6185 0 2051 108 50 0 chr5 170068795 170069073 -29561077 + AluSg SINE Alu 1 292 -18 738 155 95 40 chr5 170069078 170069226 -29560924 + MER97c DNA MER1_type? 21 176 -914 325 229 0 11 chr5 170069771 170069874 -29560276 - MIR SINE MIR -69 139 40 262 294 0 0 chr5 170070021 170070089 -29560061 + L2 LINE L2 3246 3313 0 202 266 53 75 chr5 170070096 170070190 -29559960 - L3 LINE CR1 -88 1489 1398 22 0 0 0 chr5 170070375 170070397 -29559753 + AT_rich Low_complexity Low_complexity 1 22 0 2075 107 0 11 chr5 170070783 170071063 -29559087 + AluSx SINE Alu 25 301 -11 193 330 23 0 chr5 170071068 170071156 -29558994 - MIR SINE MIR -65 197 108 377 342 36 25 chr5 170071212 170071408 -29558742 - L2 LINE L2 -31 3241 3044 659 166 97 41 chr5 170071445 170071590 -29558560 + MER97c DNA MER1_type? 21 173 -917 192 182 0 0 chr5 170071672 170071716 -29558434 + (CA)n Simple_repeat Simple_repeat 1 44 0 1975 183 107 38 chr5 170072248 170072668 -29557482 - MLT2B1 LTR ERVL -71 449 1 1950 124 33 4 chr5 170072668 170072942 -29557208 + AluSx SINE Alu 1 282 -30 234 62 0 0 chr5 170072944 170072976 -29557174 + (TTAAA)n Simple_repeat Simple_repeat 3 34 0 394 331 87 0 chr5 170073691 170073863 -29556287 + L2 LINE L2 3121 3307 -6 6078 146 190 35 chr5 170074733 170076095 -29554055 - pTR5 LTR ERV1 -143 2295 723 792 206 15 40 chr5 170076135 170076334 -29553816 - MER117 DNA MER1_type -3 194 1 714 224 98 23 chr5 170077559 170077773 -29552377 - MIR SINE MIR -12 250 21 1932 156 13 3 chr5 170078088 170078389 -29551761 - AluJo SINE Alu -8 304 1 2312 97 0 3 chr5 170078781 170079079 -29551071 + AluSx SINE Alu 1 297 -15 486 290 49 82 chr5 170079634 170079999 -29550151 + LTR67 LTR ERVL 179 531 -26 3882 119 81 0 chr5 170080239 170080843 -29549307 + MER39B LTR ERV1 1 653 0 290 282 64 0 chr5 170081271 170081349 -29548801 - L2 LINE L2 -27 3245 3163 2117 112 169 8 chr5 170082153 170082520 -29547630 - MSTA LTR MaLR 0 428 3 218 306 0 0 chr5 170082988 170083050 -29547100 + L2 LINE L2 3205 3266 -47 197 0 71 0 chr5 170083070 170083098 -29547052 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 2005 106 0 4 chr5 170083099 170083364 -29546786 - AluSq SINE Alu -49 264 1 373 296 156 15 chr5 170083388 170083587 -29546563 - MIR SINE MIR -34 228 2 347 352 47 14 chr5 170083708 170083921 -29546229 + L2 LINE L2 2566 2785 -529 238 243 14 0 chr5 170083917 170083991 -29546159 + MER5A DNA MER1_type 22 96 -93 * 254 296 62 0 chr5 170084456 170084537 -29545613 + L2 LINE L2 3208 3293 -20 1837 101 40 4 chr5 170084929 170085203 -29544947 + AluSg SINE Alu 25 307 0 306 326 82 16 chr5 170085660 170085844 -29544306 - MER117 DNA MER1_type -1 196 1 253 352 9 9 chr5 170086139 170086247 -29543903 - MIR SINE MIR -78 130 23 233 29 29 0 chr5 170086352 170086386 -29543764 + (CA)n Simple_repeat Simple_repeat 2 36 0 526 89 0 25 chr5 170086569 170086648 -29543502 + L1MA1 LINE L1 6219 6295 -7 24 0 0 0 chr5 170086701 170086725 -29543425 + AT_rich Low_complexity Low_complexity 1 24 0 2349 91 0 3 chr5 170086736 170087032 -29543118 + AluSx SINE Alu 1 295 -17 255 245 7 0 chr5 170087054 170087210 -29542940 + (CA)n Simple_repeat Simple_repeat 1 157 0 677 273 39 60 chr5 170087854 170088136 -29542014 + MLT1L LTR MaLR 5 280 -335 1259 144 62 10 chr5 170088196 170088391 -29541759 - AluJb SINE Alu -22 290 86 1593 184 102 105 chr5 170088444 170089035 -29541115 + MLT1G LTR MaLR 2 590 0 485 241 51 15 chr5 170089036 170089173 -29540977 + MLT1L LTR MaLR 427 568 -47 762 162 104 2 chr5 170089182 170089335 -29540815 - MLT1B LTR MaLR -2 386 203 491 179 108 38 chr5 170089332 170089494 -29540656 + MLT1L LTR MaLR 242 432 -158 * 1084 171 0 34 chr5 170089519 170089724 -29540426 - MLT1B LTR MaLR -192 198 1 1727 145 64 14 chr5 170089935 170090218 -29539932 - AluJb SINE Alu -15 297 1 302 269 108 0 chr5 170090698 170090828 -29539322 + L1MC4a LINE L1 5770 5913 -1895 1335 263 127 6 chr5 170090983 170091643 -29538507 + L1MDa LINE L1 1366 2207 -4383 905 188 6 6 chr5 170092528 170092688 -29537462 + FRAM SINE Alu 1 160 -6 2582 57 0 0 chr5 170092957 170093256 -29536894 - AluY SINE Alu -10 301 3 269 254 0 0 chr5 170094293 170094356 -29535794 - MIR SINE MIR 0 262 200 197 250 0 0 chr5 170094370 170094410 -29535740 + MIR3 SINE MIR 120 159 -49 1019 196 50 50 chr5 170094415 170094634 -29535516 + MER58A DNA MER1_type 6 224 0 1764 106 31 75 chr5 170095006 170095139 -29535011 - L1PA14 LINE L1 -2 6159 6022 2257 123 7 0 chr5 170095139 170095449 -29534701 - AluSx SINE Alu 0 312 1 1764 106 31 75 chr5 170095449 170095637 -29534513 - L1PA14 LINE L1 -139 6022 5852 791 168 0 28 chr5 170096605 170096748 -29533402 - FAM SINE Alu -5 44 1 365 191 29 57 chr5 170097217 170097322 -29532828 - MIR SINE MIR -48 214 113 198 0 0 0 chr5 170097780 170097802 -29532348 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 496 131 12 0 chr5 170099632 170099716 -29530434 - L1MB8 LINE L1 -1 6177 6093 2030 155 9 77 chr5 170099722 170099897 -29530253 - L1MB4 LINE L1 0 6180 5995 2156 133 0 0 chr5 170099897 170100190 -29529960 - AluSq SINE Alu -20 293 1 2030 155 9 77 chr5 170100190 170100479 -29529671 - L1MB4 LINE L1 -185 5995 5748 292 280 0 40 chr5 170100890 170100990 -29529160 + MIR3 SINE MIR 74 169 -39 2108 130 10 0 chr5 170101092 170101385 -29528765 + AluSx SINE Alu 1 296 -16 535 312 82 4 chr5 170102077 170102308 -29527842 + L2 LINE L2 2362 2610 -704 473 286 126 61 chr5 170102356 170102726 -29527424 + L3 LINE CR1 737 1144 -433 240 35 0 0 chr5 170102726 170102755 -29527395 + (TA)n Simple_repeat Simple_repeat 2 30 0 473 286 126 61 chr5 170102755 170102846 -29527304 + L3 LINE CR1 1144 1228 -349 602 301 70 27 chr5 170102967 170103266 -29526884 + L2 LINE L2 3002 3313 0 991 155 19 0 chr5 170103844 170104005 -29526145 + AluSg/x SINE Alu 135 298 -12 324 252 168 8 chr5 170104090 170104228 -29525922 - MIR SINE MIR -62 146 40 568 200 170 0 chr5 170104402 170104537 -29525613 + MER5A DNA MER1_type 32 189 0 793 245 48 39 chr5 170104785 170104993 -29525157 + MER63A DNA MER1_type 1 210 0 552 311 12 29 chr5 170105588 170105829 -29524321 - MIR SINE MIR -5 257 21 208 371 19 9 chr5 170106072 170106177 -29523973 + L3 LINE CR1 1065 1170 -407 971 256 124 28 chr5 170106232 170106587 -29523563 + MLT1J2 LTR MaLR 6 394 -56 213 294 72 72 chr5 170106608 170106660 -29523490 + L3 LINE CR1 1187 1238 -339 2675 133 10 0 chr5 170106660 170107059 -29523091 + MER57A LTR ERV1 1 403 0 213 294 72 72 chr5 170107059 170107157 -29522993 + L3 LINE CR1 1238 1340 -237 2120 130 21 26 chr5 170107157 170107534 -29522616 + THE1C LTR MaLR 1 375 0 213 294 72 72 chr5 170107534 170107603 -29522547 + L3 LINE CR1 1339 1407 -170 184 333 7 48 chr5 170107601 170107748 -29522402 + L2 LINE L2 2840 2980 -292 * 1135 230 24 115 chr5 170107767 170108307 -29521843 - L2 LINE L2 -5 3308 2818 330 303 42 106 chr5 170108318 170108492 -29521658 + L2 LINE L2 3015 3168 -104 3294 149 33 81 chr5 170108492 170109218 -29520932 + LTR8 LTR ERV1 1 691 0 330 303 42 106 chr5 170109218 170109307 -29520843 + L2 LINE L2 3168 3261 -11 276 268 0 12 chr5 170109924 170110007 -29520143 + MIR SINE MIR 75 155 -62 291 300 181 48 chr5 170110169 170110323 -29519827 + L2 LINE L2 2869 3001 -312 1954 179 14 8 chr5 170110323 170110686 -29519464 + MLT1A1 LTR MaLR 1 365 0 291 300 181 48 chr5 170110686 170110924 -29519226 + L2 LINE L2 3001 3313 0 5468 35 0 5 chr5 170111345 170111978 -29518172 - L1PA5 LINE L1 -1 6153 5524 2221 163 37 113 chr5 170112565 170113165 -29516985 + MLT2B3 LTR ERVL 1 554 0 550 279 69 21 chr5 170113387 170113620 -29516530 + MIR SINE MIR 2 245 -17 314 291 0 0 chr5 170114979 170115058 -29515092 - MIR3 SINE MIR -21 187 109 190 178 200 0 chr5 170115134 170115179 -29514971 + MIR SINE MIR 119 172 -90 181 333 0 0 chr5 170115468 170115519 -29514631 - L2 LINE L2 -16 3256 3206 * 292 303 20 10 chr5 170115512 170115611 -29514539 - MIR SINE MIR -138 124 25 4167 103 48 8 chr5 170115920 170116548 -29513602 + MER39B LTR ERV1 1 653 0 249 254 42 76 chr5 170116583 170116701 -29513449 - MIR SINE MIR -96 166 53 214 303 135 0 chr5 170116708 170116797 -29513353 + MIR3 SINE MIR 88 188 -20 2714 86 8 8 chr5 170117006 170117368 -29512782 + THE1B LTR MaLR 3 364 0 2651 110 0 0 chr5 170117389 170117744 -29512406 + THE1A LTR MaLR 1 355 0 12012 91 8 0 chr5 170117745 170119311 -29510839 + THE1A-int LTR MaLR 2 1580 0 2807 73 3 3 chr5 170119311 170119666 -29510484 + THE1A LTR MaLR 1 355 0 946 217 98 45 chr5 170119780 170120139 -29510011 - L2 LINE L2 -1 3312 2935 386 253 126 26 chr5 170120225 170120415 -29509735 - L2 LINE L2 -568 2746 2538 2295 147 114 50 chr5 170120572 170120659 -29509491 - MLT1D LTR MaLR 0 505 425 2103 94 4 4 chr5 170120659 170120926 -29509224 + AluJb SINE Alu 15 281 -31 285 75 0 0 chr5 170120927 170120967 -29509183 + (CA)n Simple_repeat Simple_repeat 2 41 0 2295 147 114 50 chr5 170120967 170121352 -29508798 - MLT1D LTR MaLR -79 426 1 1865 148 47 0 chr5 170122068 170122406 -29507744 + L1MA8 LINE L1 5931 6284 -7 1623 167 36 18 chr5 170122433 170122714 -29507436 + AluJo SINE Alu 1 286 -26 608 236 0 58 chr5 170122738 170122929 -29507221 + MIR SINE MIR 56 235 -27 572 288 14 36 chr5 170123786 170124005 -29506145 - MIR SINE MIR -47 215 2 2010 118 71 0 chr5 170124501 170124670 -29505480 + L1PA16 LINE L1 5806 5962 -204 2088 116 25 0 chr5 170124670 170124954 -29505196 + AluSx SINE Alu 1 291 -21 2010 118 71 0 chr5 170124954 170125106 -29505044 + L1PA16 LINE L1 5962 6150 -16 493 171 0 0 chr5 170125458 170125546 -29504604 + L1MA5A LINE L1 6208 6295 -2 458 275 29 53 chr5 170125573 170125744 -29504406 + MIR SINE MIR 26 192 -70 336 300 86 43 chr5 170126527 170126952 -29503198 - MLT1J2 LTR MaLR 0 446 3 745 291 27 58 chr5 170127216 170127746 -29502404 + L1ME4a LINE L1 5549 6121 0 2370 104 7 0 chr5 170127775 170128082 -29502068 + AluSx SINE Alu 2 310 -2 268 176 37 120 chr5 170128381 170128489 -29501661 + MER91C DNA MER1_type 24 122 -18 235 310 38 51 chr5 170128638 170128796 -29501354 - L2 LINE L2 -560 2754 2599 752 293 29 4 chr5 170128880 170129119 -29501031 - MIR SINE MIR -11 251 7 4266 121 3 2 chr5 170129184 170129814 -29500336 + L1PA13 LINE L1 5526 6156 -7 9959 36 2 0 chr5 170129904 170131865 -29498285 + L1PA3 LINE L1 4186 6155 0 834 255 88 21 chr5 170132162 170132401 -29497749 - MIR SINE MIR -6 256 2 612 222 136 0 chr5 170132412 170132574 -29497576 - MIR SINE MIR -3 259 76 876 237 69 47 chr5 170132790 170133064 -29497086 + MLT1I LTR MaLR 57 336 -73 258 286 34 42 chr5 170133124 170133243 -29496907 - MIR SINE MIR -75 133 16 187 293 38 19 chr5 170133910 170134016 -29496134 + L2 LINE L2 2957 3064 -208 484 235 10 100 chr5 170134132 170134213 -29495937 + MER117 DNA MER1_type 12 99 -98 1475 159 81 44 chr5 170134213 170134358 -29495792 + AluJo SINE Alu 1 139 -173 2210 111 3 19 chr5 170134358 170134673 -29495477 + AluSq SINE Alu 1 310 -3 1475 159 81 44 chr5 170134673 170134822 -29495328 + AluJo SINE Alu 139 306 -6 484 235 10 100 chr5 170134822 170134940 -29495210 + MER117 DNA MER1_type 99 193 -4 367 228 168 10 chr5 170135544 170135645 -29494505 + MER103 DNA DNA 3 119 -47 547 297 106 4 chr5 170135734 170135970 -29494180 + MIR SINE MIR 3 262 0 1135 242 107 0 chr5 170136023 170136333 -29493817 - LTR16A LTR ERVL -5 445 103 226 140 175 0 chr5 170136526 170136583 -29493567 - L2 LINE L2 0 3313 3247 2615 157 60 60 chr5 170137273 170137858 -29492292 + MER34C LTR ERV1 1 585 0 236 221 134 18 chr5 170137944 170138074 -29492076 - MIR SINE MIR -79 129 40 1748 184 11 28 chr5 170138424 170138436 -29491714 - MER4D LTR ERV1 -8 895 884 1836 149 14 0 chr5 170138436 170138717 -29491433 - AluJb SINE Alu -27 285 1 1748 184 11 28 chr5 170138717 170139057 -29491093 - MER4D LTR ERV1 -19 884 549 1570 170 57 14 chr5 170139092 170139200 -29490950 - MER49 LTR ERV1 -629 294 192 2494 77 6 0 chr5 170139200 170139511 -29490639 + AluSp SINE Alu 1 313 0 1570 170 57 14 chr5 170139511 170139684 -29490466 - MER49 LTR ERV1 -731 192 1 443 273 16 8 chr5 170139818 170139939 -29490211 - L2 LINE L2 -5 3267 3146 393 294 15 34 chr5 170139998 170140202 -29489948 + L1ME LINE L1 5529 5728 -393 455 0 0 18 chr5 170140212 170140268 -29489882 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 685 211 5 18 chr5 170140290 170140472 -29489678 - MER93b LTR ERV1 -38 335 124 571 209 115 14 chr5 170140455 170140603 -29489547 - MLT1A1 LTR MaLR -202 163 1 * 216 344 238 0 chr5 170141035 170141186 -29488964 + MIR SINE MIR 1 187 -75 741 218 27 27 chr5 170141620 170141808 -29488342 - MER5A DNA MER1_type 0 189 2 1750 128 89 45 chr5 170142626 170142985 -29487165 + THE1C LTR MaLR 1 375 0 185 318 0 0 chr5 170143058 170143124 -29487026 - L2 LINE L2 -5 3308 3243 536 130 120 0 chr5 170143247 170143347 -29486803 - MIR SINE MIR -13 249 138 191 138 0 0 chr5 170144102 170144131 -29486019 + MIR SINE MIR 119 147 -115 400 279 82 72 chr5 170144159 170144391 -29485759 - MIR SINE MIR -9 253 18 5129 129 35 18 chr5 170145162 170146045 -29484105 - MER4D LTR ERV1 -5 898 1 470 187 0 65 chr5 170146103 170146180 -29483970 + L2 LINE L2 3192 3262 -51 2803 94 3 0 chr5 170146180 170146543 -29483607 + THE1B LTR MaLR 1 364 0 470 187 0 65 chr5 170146543 170146572 -29483578 + L2 LINE L2 3262 3291 -22 249 192 0 19 chr5 170146604 170146656 -29483494 + MLT1E LTR MaLR 1 51 -603 * 1987 172 85 30 chr5 170146655 170147158 -29482992 - LTR49 LTR ERV1 -35 560 81 1078 255 90 21 chr5 170147158 170147491 -29482659 + MLT1E LTR MaLR 44 399 -194 1313 213 40 41 chr5 170147499 170147831 -29482319 + L1M4c LINE L1 2079 2410 -3972 811 234 6 0 chr5 170147831 170147998 -29482152 + FAM SINE Alu 1 168 -7 1313 213 40 41 chr5 170147998 170148340 -29481810 + L1M4c LINE L1 2410 2758 -3624 986 195 109 52 chr5 170148343 170148727 -29481423 + L1MC5 LINE L1 7507 7912 -49 1888 150 7 3 chr5 170148743 170149036 -29481114 - AluJb SINE Alu -18 294 1 214 250 0 0 chr5 170149106 170149158 -29480992 - L2 LINE L2 0 3313 3262 274 296 111 0 chr5 170149296 170149404 -29480746 - MIR3 SINE MIR -8 200 81 703 303 68 0 chr5 170149418 170149652 -29480498 - MIR SINE MIR -5 257 8 180 77 0 0 chr5 170149712 170149738 -29480412 + (GA)n Simple_repeat Simple_repeat 2 27 0 557 239 0 30 chr5 170150125 170150259 -29479891 + MIR3 SINE MIR 33 162 -46 1606 163 58 32 chr5 170150419 170150763 -29479387 + MLT1A1 LTR MaLR 1 353 -12 6436 129 13 9 chr5 170151578 170152621 -29477529 + Tigger1 DNA MER2_type 1 1048 -1370 819 136 0 0 chr5 170152622 170152754 -29477396 + L1 LINE L1 4795 4926 -1220 * 13558 192 17 7 chr5 170152747 170156985 -29473165 + L1P5 LINE L1 2191 6503 -364 2206 141 0 3 chr5 170156985 170157298 -29472852 + AluSx SINE Alu 1 312 0 256 198 12 12 chr5 170157305 170157386 -29472764 + (TA)n Simple_repeat Simple_repeat 2 82 0 324 264 11 11 chr5 170157388 170157475 -29472675 - L1MC4 LINE L1 -1340 6702 6616 1956 118 71 0 chr5 170157957 170158126 -29472024 + L1PA16 LINE L1 5806 5962 -204 2063 116 25 0 chr5 170158126 170158410 -29471740 + AluSx SINE Alu 1 291 -21 1956 118 71 0 chr5 170158410 170158562 -29471588 + L1PA16 LINE L1 5962 6150 -16 465 171 0 0 chr5 170158916 170159004 -29471146 + L1MA5A LINE L1 6208 6295 -2 507 257 29 57 chr5 170159027 170159202 -29470948 + MIR SINE MIR 23 192 -70 289 266 62 26 chr5 170160035 170160148 -29470002 - MLT1J2 LTR MaLR -43 407 291 608 294 19 45 chr5 170160682 170161147 -29469003 + L1ME4a LINE L1 5554 6052 -69 2363 104 7 0 chr5 170161233 170161540 -29468610 + AluSx SINE Alu 2 310 -2 297 176 37 120 chr5 170161839 170161947 -29468203 - MER91C DNA MER1_type -23 117 19 257 316 38 51 chr5 170162096 170162254 -29467896 - L2 LINE L2 -560 2754 2599 837 293 29 4 chr5 170162338 170162577 -29467573 - MIR SINE MIR -11 251 7 4157 121 3 2 chr5 170162642 170163272 -29466878 + L1PA13 LINE L1 5526 6156 -7 9812 25 0 7 chr5 170163394 170165331 -29464819 + L1PA4 LINE L1 4225 6154 -1 32 0 0 0 chr5 170165332 170165364 -29464786 + AT_rich Low_complexity Low_complexity 1 32 0 285 350 15 29 chr5 170165607 170165744 -29464406 - MER5A DNA MER1_type -27 162 28 255 329 51 15 chr5 170165985 170166122 -29464028 + MER117 DNA MER1_type 20 161 -36 738 256 35 16 chr5 170166755 170167009 -29463141 + MIR SINE MIR 2 260 -2 279 218 209 45 chr5 170167035 170167145 -29463005 + MIR3 SINE MIR 45 172 -36 297 310 60 69 chr5 170168146 170168378 -29461772 + MLT1H LTR MaLR 125 354 -195 226 385 45 6 chr5 170169304 170169460 -29460690 + L1MEc LINE L1 221 382 -6014 234 228 76 35 chr5 170169929 170170074 -29460076 + L1MEc LINE L1 653 803 -5402 1509 229 79 30 chr5 170170109 170170502 -29459648 + L1ME1 LINE L1 5631 6057 -109 2080 108 7 0 chr5 170170502 170170807 -29459343 + AluSx SINE Alu 1 307 0 1509 229 79 30 chr5 170170807 170170903 -29459247 + L1ME1 LINE L1 6057 6147 -19 1148 259 94 56 chr5 170170954 170171603 -29458547 + L1MC4a LINE L1 5277 5945 -1863 270 251 29 103 chr5 170172268 170172443 -29457707 - MIR SINE MIR 0 262 101 362 256 45 60 chr5 170172469 170172602 -29457548 - MIR SINE MIR -119 143 13 642 270 154 12 chr5 170172619 170172938 -29457212 - L3 LINE CR1 -5 1572 1209 29 0 0 0 chr5 170173003 170173032 -29457118 + AT_rich Low_complexity Low_complexity 1 29 0 1150 190 85 23 chr5 170173067 170173374 -29456776 - L1ME2 LINE L1 -9 6155 5830 259 188 16 47 chr5 170173376 170173440 -29456710 - Tigger5 DNA MER2_type 0 2323 2262 383 225 22 0 chr5 170173489 170173578 -29456572 - Tigger5 DNA MER2_type -2231 92 2 727 196 54 5 chr5 170173649 170173833 -29456317 - L1ME2 LINE L1 -377 5787 5595 389 231 29 10 chr5 170173875 170173979 -29456171 + L1ME LINE L1 5414 5519 -643 336 273 191 24 chr5 170174010 170174219 -29455931 - L3 LINE CR1 -504 1073 830 337 337 34 51 chr5 170174459 170174634 -29455516 - MIR SINE MIR -71 191 20 553 249 173 10 chr5 170174920 170175117 -29455033 + MIR SINE MIR 22 250 -12 279 79 0 0 chr5 170175125 170175163 -29454987 + (CAT)n Simple_repeat Simple_repeat 2 39 0 907 192 17 17 chr5 170176729 170176906 -29453244 + MER45A DNA AcHobo 2 178 0 297 75 0 0 chr5 170176916 170176956 -29453194 + (CA)n Simple_repeat Simple_repeat 2 41 0 442 286 231 0 chr5 170177020 170177223 -29452927 + MIR SINE MIR 6 255 -7 357 233 75 7 chr5 170177385 170177531 -29452619 + MER113 DNA MER1_type? 1 156 -365 373 310 0 9 chr5 170177920 170178033 -29452117 + MER5A DNA MER1_type 1 112 -77 362 290 61 3 chr5 170178102 170178296 -29451854 - MIR SINE MIR 0 262 3 402 351 13 7 chr5 170178671 170178822 -29451328 + L3 LINE CR1 1425 1576 -1 303 209 29 9 chr5 170178878 170178983 -29451167 + GA-rich Low_complexity Low_complexity 2 108 0 23 33 0 0 chr5 170179294 170179324 -29450826 + AT_rich Low_complexity Low_complexity 1 30 0 2395 135 14 49 chr5 170179684 170180129 -29450021 + MSTB1 LTR MaLR 1 429 -3 2297 84 0 43 chr5 170180218 170180541 -29449609 - AluY SINE Alu -2 309 1 2065 121 13 3 chr5 170180884 170181191 -29448959 - AluSx SINE Alu 0 312 3 379 313 78 60 chr5 170181236 170181679 -29448471 - L1M4c LINE L1 -1047 1696 1047 304 356 14 14 chr5 170181954 170182100 -29448050 - Charlie8 DNA MER1_type -2271 146 1 264 213 12 0 chr5 170182469 170182549 -29447601 - Charlie5 DNA MER1_type -166 2446 2366 2276 103 0 3 chr5 170182610 170182910 -29447240 - AluSx SINE Alu -13 299 1 753 179 71 5 chr5 170183641 170183853 -29446297 + MER33 DNA MER1_type 23 248 -76 584 281 132 19 chr5 170184265 170184681 -29445469 + L1ME4a LINE L1 5385 5847 -274 299 334 77 42 chr5 170184695 170185300 -29444850 + L2 LINE L2 2644 3272 0 25 0 0 28 chr5 170185526 170185548 -29444602 + AT_rich Low_complexity Low_complexity 1 23 -12 2498 89 14 3 chr5 170185548 170185895 -29444255 + L1PA13 LINE L1 5813 6163 0 25 0 0 28 chr5 170185895 170185908 -29444242 + AT_rich Low_complexity Low_complexity 23 35 0 339 314 32 48 chr5 170186606 170186730 -29443420 - L2 LINE L2 -2 3270 3149 1929 142 45 3 chr5 170186818 170187107 -29443043 - AluSx SINE Alu -11 301 1 188 283 198 9 chr5 170187166 170187272 -29442878 + L2 LINE L2 3186 3311 -2 377 269 68 133 chr5 170187691 170187831 -29442319 + L3 LINE CR1 1140 1259 -318 4082 98 11 2 chr5 170187831 170188400 -29441750 + L1PA11 LINE L1 5599 6172 -2 377 269 68 133 chr5 170188400 170188508 -29441642 + L3 LINE CR1 1259 1372 -205 211 274 0 0 chr5 170188997 170189048 -29441102 + L2 LINE L2 3204 3254 -18 514 332 116 28 chr5 170189714 170190075 -29440075 - L3 LINE CR1 -12 1565 1173 24 77 0 0 chr5 170191095 170191147 -29439003 + AT_rich Low_complexity Low_complexity 1 52 0 2949 133 63 4 chr5 170191218 170191729 -29438421 + LTR1B LTR ERV1 1 541 -285 684 180 0 16 chr5 170191730 170191858 -29438292 + LTR1B LTR ERV1 701 826 0 269 354 0 0 chr5 170193216 170193295 -29436855 - L2 LINE L2 0 3313 3235 721 284 35 26 chr5 170193517 170193749 -29436401 + MIR SINE MIR 17 250 -12 285 296 122 0 chr5 170193770 170193885 -29436265 - L2 LINE L2 -317 2955 2827 201 314 152 0 chr5 170194193 170194298 -29435852 + MIR SINE MIR 4 124 -138 686 244 45 11 chr5 170194684 170194860 -29435290 + MIR SINE MIR 16 197 -65 1724 197 50 64 chr5 170194861 170195379 -29434771 + MER113 DNA MER1_type? 11 521 0 1294 168 0 10 chr5 170195741 170195949 -29434201 + LTR1B LTR ERV1 1 206 -620 278 174 22 6 chr5 170196137 170196210 -29433940 - AluJ/FLAM SINE Alu -243 59 1 786 233 156 37 chr5 170197412 170197764 -29432386 + L1ME4a LINE L1 5725 6118 -3 23 33 0 0 chr5 170197770 170197800 -29432350 + AT_rich Low_complexity Low_complexity 1 30 0 276 233 0 17 chr5 170197848 170197908 -29432242 - MIR3 SINE MIR 0 208 150 2042 110 7 0 chr5 170197915 170198191 -29431959 + AluSc SINE Alu 1 279 -25 191 61 30 0 chr5 170198191 170198224 -29431926 + (CAAAC)n Simple_repeat Simple_repeat 1 34 0 21 0 0 0 chr5 170198229 170198250 -29431900 + AT_rich Low_complexity Low_complexity 1 21 0 1956 143 7 7 chr5 170198315 170198609 -29431541 - AluSx SINE Alu -18 294 1 372 273 0 10 chr5 170198641 170198740 -29431410 - MLT1L LTR MaLR -4 611 514 409 333 8 0 chr5 170198998 170199124 -29431026 + MIR3 SINE MIR 79 205 -3 7445 39 8 0 chr5 170199628 170201222 -29428928 - L1PA7 LINE L1 -5 6149 4549 225 293 40 0 chr5 170201277 170201352 -29428798 + MIR3 SINE MIR 82 159 -49 2067 125 0 20 chr5 170201455 170201760 -29428390 - AluSx SINE Alu -13 299 1 2315 103 0 3 chr5 170201876 170202187 -29427963 - AluSx SINE Alu -2 310 1 1509 182 24 34 chr5 170202188 170202344 -29427806 - AluJb SINE Alu -18 294 141 2100 87 56 0 chr5 170202344 170202632 -29427518 - AluY SINE Alu -7 304 1 1509 182 24 34 chr5 170202632 170202772 -29427378 - AluJb SINE Alu -171 141 1 763 229 86 89 chr5 170202780 170203107 -29427043 + MLT1C LTR MaLR 142 467 0 2154 84 3 14 chr5 170203321 170203628 -29426522 + AluY SINE Alu 1 304 0 191 376 66 23 chr5 170203635 170203893 -29426257 + L2 LINE L2 2578 2846 -468 1074 202 5 0 chr5 170204025 170204213 -29425937 - MLT1B LTR MaLR 0 390 202 983 163 60 0 chr5 170204214 170204380 -29425770 - AluJb SINE Alu -17 295 120 2118 115 13 0 chr5 170204398 170204703 -29425447 + AluSx SINE Alu 1 309 -3 2185 89 4 4 chr5 170205024 170205304 -29424846 + AluSq SINE Alu 1 280 -33 612 209 17 6 chr5 170205307 170205479 -29424671 + GA-rich Low_complexity Low_complexity 2 175 0 607 272 103 30 chr5 170205914 170206146 -29424004 - MIR SINE MIR -1 261 13 1488 152 29 0 chr5 170206371 170206614 -29423536 - L1MB5 LINE L1 -9 6165 5916 189 294 119 24 chr5 170207313 170207351 -29422799 - MIR SINE MIR -12 250 217 2495 73 0 0 chr5 170207351 170207654 -29422496 - AluY SINE Alu -8 303 1 189 294 119 24 chr5 170207654 170207741 -29422409 - MIR SINE MIR -45 217 113 2099 114 24 7 chr5 170207837 170208135 -29422015 - AluSx SINE Alu -9 303 1 264 163 102 0 chr5 170208478 170208527 -29421623 + MIR SINE MIR 111 164 -98 1034 255 34 85 chr5 170208551 170208700 -29421450 + MLT1J LTR MaLR 22 177 -334 676 132 33 160 chr5 170208700 170208801 -29421349 - MER53 DNA DNA -3 186 74 306 0 0 0 chr5 170208801 170208835 -29421315 + (TG)n Simple_repeat Simple_repeat 1 34 0 234 0 0 0 chr5 170208834 170208860 -29421290 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 676 132 33 160 chr5 170208835 170208862 -29421288 - MER53 DNA DNA -115 74 45 1983 91 45 0 chr5 170208862 170209126 -29421024 - AluSx SINE Alu -36 276 1 676 132 33 160 chr5 170209126 170209234 -29420916 - MER53 DNA DNA -144 45 1 1034 255 34 85 chr5 170209234 170209555 -29420595 + MLT1J LTR MaLR 177 468 -43 1840 136 0 4 chr5 170209734 170209998 -29420152 - AluJo SINE Alu -8 304 42 608 254 7 0 chr5 170210119 170210261 -29419889 + L2 LINE L2 3171 3313 0 397 164 0 0 chr5 170210684 170210757 -29419393 + L1MB2 LINE L1 6097 6169 -2 221 281 31 62 chr5 170210787 170210883 -29419267 - MIR SINE MIR -109 153 61 1478 126 9 0 chr5 170210898 170211113 -29419037 - AluJb SINE Alu -9 303 87 2210 113 3 0 chr5 170211655 170211947 -29418203 + AluSp SINE Alu 1 293 -20 312 228 139 0 chr5 170212090 170212169 -29417981 + MER117 DNA MER1_type 2 91 -106 1005 226 63 8 chr5 170212323 170212562 -29417588 + MIR SINE MIR 9 260 -2 184 279 0 16 chr5 170212567 170212628 -29417522 + L2 LINE L2 3201 3260 -12 402 229 0 31 chr5 170212687 170212783 -29417367 - MIR SINE MIR 0 262 170 778 190 117 0 chr5 170212929 170213066 -29417084 + AluJb SINE Alu 130 282 -30 497 320 11 6 chr5 170213304 170213479 -29416671 - MIR SINE MIR -3 259 84 1818 174 0 0 chr5 170214736 170215024 -29415126 - AluJb SINE Alu -10 302 15 237 282 0 28 chr5 170215091 170215162 -29414988 + L2 LINE L2 2255 2323 -991 3132 171 23 80 chr5 170215177 170215360 -29414790 + L1MB2 LINE L1 5431 5623 -548 1645 129 7 26 chr5 170215360 170215631 -29414519 + L1MA7 LINE L1 6014 6279 -12 2293 93 0 0 chr5 170215631 170215921 -29414229 - AluSc SINE Alu -19 290 1 3132 171 23 80 chr5 170215921 170216483 -29413667 + L1MB2 LINE L1 5621 6134 -37 923 125 7 29 chr5 170216506 170216642 -29413508 - FLAM_C SINE Alu 0 133 1 290 93 0 0 chr5 170216642 170216685 -29413465 + L1MB4 LINE L1 6135 6177 -3 717 332 88 32 chr5 170216707 170216920 -29413230 + L2 LINE L2 2375 2575 -697 2227 69 9 50 chr5 170216920 170217238 -29412912 - AluSq SINE Alu -8 305 1 717 332 88 32 chr5 170217238 170217878 -29412272 + L2 LINE L2 2575 3271 -1 24 53 0 0 chr5 170218486 170218524 -29411626 + AT_rich Low_complexity Low_complexity 1 38 0 266 203 14 29 chr5 170219002 170219071 -29411079 - Charlie8 DNA MER1_type -1918 499 432 3357 219 64 8 chr5 170219084 170219926 -29410224 + L1MC4 LINE L1 6854 7742 -300 345 273 0 0 chr5 170219920 170219997 -29410153 + L1MC4a LINE L1 7730 7806 -2 * 2171 115 0 3 chr5 170219999 170220295 -29409855 - AluSx SINE Alu -17 295 1 2564 116 8 6 chr5 170220558 170220912 -29409238 - THE1A LTR MaLR 0 355 1 2291 98 3 3 chr5 170220986 170221292 -29408858 - AluSc SINE Alu -3 306 1 4498 152 29 14 chr5 170221308 170221752 -29408398 + L1MB3 LINE L1 5380 5843 -340 2248 109 0 0 chr5 170221752 170222046 -29408104 + AluSx SINE Alu 1 294 -18 4498 152 29 14 chr5 170222046 170222393 -29407757 + L1MB3 LINE L1 5843 6183 0 687 251 80 40 chr5 170222397 170222596 -29407554 + MIR SINE MIR 27 233 -29 6552 67 18 42 chr5 170222596 170223443 -29406707 + LTR12 LTR ERV1 1 826 0 202 238 95 83 chr5 170223573 170223657 -29406493 - L2 LINE L2 -506 2808 2724 1177 87 0 1 chr5 170223885 170224125 -29406025 + AluSx SINE Alu 2 274 -38 204 206 0 0 chr5 170224125 170224159 -29405991 + polypurine Low_complexity Low_complexity 1 34 0 266 273 27 9 chr5 170224674 170224784 -29405366 - L1ME4a LINE L1 -2 6119 6008 805 251 71 14 chr5 170225213 170225496 -29404654 - L1MCc LINE L1 -6102 321 23 500 307 86 14 chr5 170225739 170225949 -29404201 - L1M4 LINE L1 -1605 4541 4348 571 164 78 43 chr5 170225949 170226065 -29404085 + FLAM_A SINE Alu 1 120 -13 474 18 0 0 chr5 170226068 170226123 -29404027 + (TG)n Simple_repeat Simple_repeat 1 55 0 500 307 86 14 chr5 170226123 170226396 -29403754 - L1M4 LINE L1 -1799 4347 4019 2388 203 55 9 chr5 170226451 170226997 -29403153 + MER90 LTR ERV1 5 575 0 357 252 54 9 chr5 170227268 170227379 -29402771 + LTR67 LTR ERVL 397 512 -45 448 176 66 11 chr5 170227477 170227568 -29402582 - MLT2E LTR ERVL -495 133 38 2065 223 72 32 chr5 170227984 170228482 -29401668 - MLT1H LTR MaLR -12 537 20 23 0 0 0 chr5 170228749 170228772 -29401378 + AT_rich Low_complexity Low_complexity 1 23 0 1957 153 3 0 chr5 170228836 170229136 -29401014 + AluJb SINE Alu 6 306 -6 273 305 144 8 chr5 170229308 170229426 -29400724 + L2 LINE L2 3179 3312 -1 317 273 64 29 chr5 170229474 170229646 -29400504 + L1ME3A LINE L1 5988 6165 -5 1938 114 69 77 chr5 170229732 170230110 -29400040 - THE1C LTR MaLR 0 375 1 224 286 78 0 chr5 170230210 170230287 -29399863 + MIR SINE MIR 180 262 0 478 246 36 36 chr5 170230550 170230688 -29399462 - MER5A DNA MER1_type -14 175 38 232 320 82 41 chr5 170230702 170230849 -29399301 - MIR3 SINE MIR -41 167 15 437 303 99 24 chr5 170230988 170231199 -29398951 + MIR SINE MIR 36 262 0 450 237 81 75 chr5 170231256 170231429 -29398721 + MER5A DNA MER1_type 7 180 -9 1244 282 78 23 chr5 170232642 170233173 -29396977 - L2 LINE L2 -12 3301 2742 335 282 30 38 chr5 170233174 170233191 -29396959 + MER5A DNA MER1_type 1 16 -173 414 269 42 17 chr5 170233191 170233310 -29396840 - MER5A DNA MER1_type -3 186 65 2037 116 20 7 chr5 170233468 170233762 -29396388 + AluSx SINE Alu 1 298 -14 413 229 8 66 chr5 170234895 170235017 -29395133 - L2 LINE L2 0 3272 3158 2136 113 3 0 chr5 170235951 170236262 -29393888 + AluSx SINE Alu 1 312 0 353 282 9 36 chr5 170236844 170236954 -29393196 - MER5A DNA MER1_type -43 146 40 1719 185 0 3 chr5 170237213 170237510 -29392640 + AluJo SINE Alu 12 307 -5 24 0 0 0 chr5 170238749 170238773 -29391377 + AT_rich Low_complexity Low_complexity 1 24 0 1572 193 14 24 chr5 170239539 170239834 -29390316 + AluSx SINE Alu 1 292 -20 1473 179 84 4 chr5 170239880 170240154 -29389996 + AluJb SINE Alu 1 296 -16 2283 101 0 10 chr5 170240345 170240651 -29389499 + AluSc SINE Alu 1 303 -6 2406 84 0 7 chr5 170240971 170241281 -29388869 + AluSx SINE Alu 1 308 -4 600 264 46 17 chr5 170241370 170241544 -29388606 - MIR3 SINE MIR -21 187 9 189 175 0 0 chr5 170241643 170241683 -29388467 + (CA)n Simple_repeat Simple_repeat 2 41 0 787 263 105 18 chr5 170243245 170243473 -29386677 + MIR SINE MIR 15 262 0 357 291 142 7 chr5 170243528 170243669 -29386481 - MIR SINE MIR -50 212 53 2128 66 23 20 chr5 170244096 170244399 -29385751 + AluY SINE Alu 1 304 -7 185 246 82 33 chr5 170244657 170244718 -29385432 + MIR SINE MIR 16 79 -129 21 36 0 0 chr5 170244820 170244848 -29385302 + AT_rich Low_complexity Low_complexity 1 28 0 2131 141 0 0 chr5 170244896 170245194 -29384956 + AluJb SINE Alu 1 298 -14 2128 129 3 0 chr5 170245200 170245503 -29384647 + AluSx SINE Alu 1 304 -8 2245 107 10 10 chr5 170245796 170246106 -29384044 - AluSg SINE Alu 0 310 1 2504 57 3 0 chr5 170247002 170247300 -29382850 + AluY SINE Alu 1 299 -12 1606 114 4 0 chr5 170247426 170247654 -29382496 + AluSg/x SINE Alu 81 309 -3 248 0 31 0 chr5 170247827 170247859 -29382291 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1730 149 66 30 chr5 170248845 170249207 -29380943 + THE1C LTR MaLR 1 375 0 195 257 120 91 chr5 170249628 170249803 -29380347 + L2 LINE L2 2570 2749 -565 2557 210 76 61 chr5 170249930 170250834 -29379316 + L1MC5 LINE L1 6633 7550 -411 390 201 142 12 chr5 170250898 170251067 -29379083 + L1MC5 LINE L1 7711 7901 -60 187 302 75 0 chr5 170251501 170251554 -29378596 + L2 LINE L2 3242 3298 -15 654 281 108 4 chr5 170251869 170252100 -29378050 + MIR SINE MIR 8 262 0 227 286 153 0 chr5 170252098 170252196 -29377954 + MIR SINE MIR 129 241 -21 * 711 188 0 0 chr5 170252229 170252346 -29377804 + AluJo/FLAM SINE Alu 1 117 -195 2287 95 0 26 chr5 170252347 170252652 -29377498 - AluSx SINE Alu -12 300 4 377 264 35 0 chr5 170252853 170252940 -29377210 + MIR3 SINE MIR 106 195 -13 226 273 76 0 chr5 170253027 170253093 -29377057 + L2 LINE L2 3238 3308 -5 3336 228 114 24 chr5 170253387 170254675 -29375475 + L2 LINE L2 1930 3312 -1 763 161 0 8 chr5 170254796 170254920 -29375230 + FLAM_A SINE Alu 3 125 -8 1225 136 0 0 chr5 170254929 170255098 -29375052 + AluSx SINE Alu 1 169 -143 220 319 110 11 chr5 170255109 170255200 -29374950 + MIR3 SINE MIR 55 154 -54 1455 185 46 0 chr5 170255248 170255508 -29374642 + AluJo SINE Alu 25 296 -16 306 312 21 0 chr5 170255508 170255601 -29374549 + L1MC4 LINE L1 6609 6703 -1339 301 333 0 0 chr5 170255525 170255615 -29374535 - L1MC4 LINE L1 -1339 6703 6614 * 1495 141 144 0 chr5 170255792 170256048 -29374102 + AluJo SINE Alu 11 303 -9 234 308 6 96 chr5 170256168 170256324 -29373826 - MIR3 SINE MIR 0 208 67 287 346 173 42 chr5 170256352 170256705 -29373445 - L2 LINE L2 -49 3223 2825 22 0 0 0 chr5 170256813 170256835 -29373315 + AT_rich Low_complexity Low_complexity 1 22 0 612 211 15 15 chr5 170256949 170257082 -29373068 + FLAM_C SINE Alu 11 143 0 317 321 75 25 chr5 170257090 170257249 -29372901 - MIR SINE MIR -89 173 7 498 267 75 0 chr5 170257405 170257551 -29372599 + MIR SINE MIR 73 229 -33 260 269 39 0 chr5 170257777 170257855 -29372295 + L2 LINE L2 3169 3249 -23 195 248 171 29 chr5 170258365 170258470 -29371680 + MIR SINE MIR 89 208 -54 1743 154 14 3 chr5 170258472 170258757 -29371393 - AluJb SINE Alu -13 299 12 336 312 156 19 chr5 170258856 170259061 -29371089 - MIR SINE MIR -11 251 19 593 139 20 0 chr5 170259406 170259507 -29370643 - AluJb SINE Alu -8 304 202 4432 43 7 11 chr5 170259512 170260072 -29370078 + LTR6B LTR ERV1 1 558 0 1029 86 0 0 chr5 170260104 170260243 -29369907 - AluSg/x SINE Alu -3 307 169 209 238 48 60 chr5 170260253 170260266 -29369884 + L2 LINE L2 3174 3186 -86 2086 75 6 60 chr5 170260266 170260584 -29369566 - AluSg SINE Alu -9 301 1 209 238 48 60 chr5 170260584 170260654 -29369496 + L2 LINE L2 3186 3256 -16 187 205 77 64 chr5 170261286 170261364 -29368786 - MIR3 SINE MIR -54 154 76 213 213 64 0 chr5 170261590 170261637 -29368513 + MIR3 SINE MIR 126 175 -33 260 263 228 0 chr5 170261754 170261868 -29368282 - MIR SINE MIR -64 144 26 775 198 38 0 chr5 170262361 170262518 -29367632 + MER58A DNA MER1_type 45 207 -17 1790 63 0 5 chr5 170262741 170262964 -29367186 - AluY SINE Alu -89 222 1 773 305 176 41 chr5 170263777 170264487 -29365663 - L2 LINE L2 -1431 1883 1019 2190 98 3 14 chr5 170264487 170264622 -29365528 + AluSx SINE Alu 1 136 -176 2104 112 34 0 chr5 170264622 170264916 -29365234 + AluSp SINE Alu 1 304 -9 2190 98 3 14 chr5 170264916 170265075 -29365075 + AluSx SINE Alu 136 292 -20 773 305 176 41 chr5 170265075 170265284 -29364866 - L2 LINE L2 -2295 1019 840 24 0 0 0 chr5 170265398 170265422 -29364728 + AT_rich Low_complexity Low_complexity 1 24 0 465 270 153 25 chr5 170265463 170265822 -29364328 + L1ME2 LINE L1 5543 5947 -217 1701 148 11 19 chr5 170266234 170266504 -29363646 + AluJb SINE Alu 1 268 -44 2293 74 34 0 chr5 170267069 170267366 -29362784 - AluSp SINE Alu -6 307 1 1530 169 138 11 chr5 170268267 170268645 -29361505 - L1MB3 LINE L1 -1 6182 5757 1728 158 38 37 chr5 170268662 170269133 -29361017 - LTR10A LTR ERV1 -62 547 13 357 150 30 0 chr5 170269137 170269211 -29360939 - L1MB3 LINE L1 -430 5753 5687 585 335 0 12 chr5 170269463 170269636 -29360514 + MER5B DNA MER1_type 2 172 -6 2446 55 0 3 chr5 170269865 170270157 -29359993 - AluY SINE Alu -20 291 1 473 299 49 24 chr5 170270751 170270915 -29359235 + MIR SINE MIR 3 170 -92 1855 172 7 3 chr5 170271093 170271389 -29358761 - AluJo SINE Alu -15 297 1 600 103 0 103 chr5 170272001 170272034 -29358116 - MER30B DNA MER1_type -85 105 70 2179 99 0 20 chr5 170272034 170272336 -29357814 - AluY SINE Alu -15 296 1 600 103 0 103 chr5 170272336 170272419 -29357731 - MER30B DNA MER1_type -120 70 1 256 261 193 11 chr5 170272736 170272824 -29357326 + MIR3 SINE MIR 15 118 -90 233 347 32 0 chr5 170273432 170273556 -29356594 + L1ME LINE L1 5696 5823 -298 2466 35 0 0 chr5 170274074 170274392 -29355758 - AluY SINE Alu 0 318 1 280 85 21 0 chr5 170274646 170274693 -29355457 - MER30B DNA MER1_type -182 48 1 284 268 33 48 chr5 170274694 170274871 -29355279 - L1MC4 LINE L1 -432 7610 7337 1085 179 49 49 chr5 170274871 170275195 -29354955 + MER33 DNA MER1_type 1 324 0 284 268 33 48 chr5 170275195 170275217 -29354933 - L1MC4 LINE L1 -705 7337 7316 689 201 82 0 chr5 170275222 170275381 -29354769 - MER3 DNA MER1_type 0 209 38 1116 212 100 0 chr5 170275395 170275654 -29354496 + MER58B DNA MER1_type 57 341 0 2134 105 14 14 chr5 170275708 170276002 -29354148 - AluSp SINE Alu -19 294 1 2282 95 10 0 chr5 170276104 170276399 -29353751 + AluY SINE Alu 1 298 -13 2217 82 41 0 chr5 170276642 170276935 -29353215 + AluY SINE Alu 1 305 -6 30 59 0 0 chr5 170277456 170277507 -29352643 + AT_rich Low_complexity Low_complexity 1 51 0 311 250 96 0 chr5 170279579 170279683 -29350467 - L1MC4 LINE L1 -9 8033 7920 1709 133 0 12 chr5 170279753 170280009 -29350141 - AluSx SINE Alu -18 294 42 1867 138 18 7 chr5 170280030 170280335 -29349815 - AluSx SINE Alu 0 308 1 293 308 135 17 chr5 170280517 170280754 -29349396 - L2 LINE L2 -1019 2295 2031 22 35 0 0 chr5 170281658 170281687 -29348463 + AT_rich Low_complexity Low_complexity 1 29 0 1558 192 13 32 chr5 170282302 170282610 -29347540 + AluJo SINE Alu 1 302 -10 877 149 15 0 chr5 170282909 170283043 -29347107 + AluJo SINE Alu 1 136 -176 594 289 72 8 chr5 170283065 170283328 -29346822 - L1ME LINE L1 -321 5800 5521 533 277 31 67 chr5 170283372 170283567 -29346583 - MIR SINE MIR -72 190 3 395 224 51 45 chr5 170284101 170284257 -29345893 - L1MC4 LINE L1 0 8042 7886 369 224 0 0 chr5 170284352 170284419 -29345731 + AluJ/FLAM SINE Alu 1 67 -235 817 179 29 23 chr5 170284419 170284592 -29345558 + AluJo/FRAM SINE Alu 133 306 -6 418 179 0 37 chr5 170284608 170284758 -29345392 - L1MC4 LINE L1 -169 7782 7507 2280 99 3 0 chr5 170284775 170285069 -29345081 + AluSx SINE Alu 1 295 -17 906 221 0 0 chr5 170285080 170285243 -29344907 - FRAM SINE Alu -15 161 1 1710 178 36 7 chr5 170285249 170285552 -29344598 - AluJb SINE Alu 0 312 1 396 265 15 8 chr5 170285577 170285709 -29344441 - L1MC4 LINE L1 -473 7569 7437 955 44 0 96 chr5 170285799 170285934 -29344216 + AluSp/q SINE Alu 172 293 -20 271 316 118 41 chr5 170286693 170287082 -29343068 + L1MEd LINE L1 307 725 -5394 590 181 7 81 chr5 170287511 170287571 -29342579 + L1MC4 LINE L1 6725 6788 -1254 1941 148 10 7 chr5 170287571 170287862 -29342288 - AluSx SINE Alu -20 292 1 590 181 7 81 chr5 170287862 170287950 -29342200 + L1MC4 LINE L1 6788 6862 -1180 1052 69 14 24 chr5 170288092 170288520 -29341630 + (TA)n Simple_repeat Simple_repeat 1 423 0 1524 132 0 11 chr5 170288523 170288829 -29341321 + L1PB1 LINE L1 5801 6148 -3 2755 182 4 60 chr5 170288878 170289468 -29340682 + L1 LINE L1 3440 4061 -2085 2203 118 3 0 chr5 170289468 170289774 -29340376 + AluSx SINE Alu 3 309 -3 2512 68 3 0 chr5 170289781 170290091 -29340059 + AluY SINE Alu 1 311 0 2755 182 4 60 chr5 170290091 170290211 -29339939 + L1 LINE L1 4067 4118 -2028 * 6050 206 42 18 chr5 170290194 170290626 -29339524 - L1 LINE L1 -3814 2514 2094 2210 125 0 0 chr5 170290626 170290930 -29339220 + AluSx SINE Alu 1 304 -8 6050 206 42 18 chr5 170290930 170292933 -29337217 - L1 LINE L1 -4234 2094 3 2339 243 62 61 chr5 170292948 170293671 -29336479 - L1M3d LINE L1 -5010 881 633 2235 104 16 3 chr5 170293671 170293978 -29336172 + AluSx SINE Alu 2 312 0 2339 243 62 61 chr5 170293978 170294603 -29335547 - L1M3d LINE L1 -5258 633 10 303 335 26 52 chr5 170294627 170294896 -29335254 - L2 LINE L2 -5 3308 3047 271 264 33 25 chr5 170294896 170295017 -29335133 + L1MC1 LINE L1 5873 5994 -339 * 1091 191 73 8 chr5 170294929 170295175 -29334975 + L1MB8 LINE L1 5907 6168 -10 315 324 121 0 chr5 170295485 170295658 -29334492 - L2 LINE L2 -339 2975 2782 593 103 0 0 chr5 170295723 170295801 -29334349 + MADE1 DNA Mariner 1 78 -2 205 276 152 19 chr5 170295877 170295982 -29334168 - MIR SINE MIR -70 192 74 596 321 106 30 chr5 170296072 170296411 -29333739 - MLT1H LTR MaLR 0 549 185 1283 165 0 0 chr5 170296411 170296605 -29333545 + AluJo SINE Alu 1 194 -118 295 234 78 0 chr5 170296646 170296723 -29333427 - MLT1H LTR MaLR -350 199 117 2044 192 83 2 chr5 170297045 170297466 -29332684 - MLT1C LTR MaLR -7 460 6 267 31 0 0 chr5 170297683 170297715 -29332435 + (CAGA)n Simple_repeat Simple_repeat 3 34 0 1347 314 51 6 chr5 170298378 170298846 -29331304 + LTR67 LTR ERVL 69 557 0 2570 198 9 14 chr5 170299732 170300240 -29329910 + L1ME3 LINE L1 5320 5826 -338 7101 114 48 48 chr5 170300240 170301519 -29328631 + MER52C LTR ERV1 1 1278 0 2570 198 9 14 chr5 170301519 170301565 -29328585 + L1ME3 LINE L1 5826 5871 -293 1973 199 41 5 chr5 170301609 170302026 -29328124 + L1ME4a LINE L1 3777 4208 -1938 2166 129 0 3 chr5 170302029 170302332 -29327818 + AluSx SINE Alu 1 302 -10 189 107 0 0 chr5 170303457 170303485 -29326665 + (CACCAT)n Simple_repeat Simple_repeat 4 31 0 4297 205 15 19 chr5 170306878 170308145 -29322005 + L1ME4a LINE L1 4252 5511 -743 1275 151 64 0 chr5 170308145 170308357 -29321793 + L1MC1 LINE L1 6101 6333 0 817 231 33 73 chr5 170308366 170308669 -29321481 + L1ME3 LINE L1 5871 6161 -1 195 139 23 23 chr5 170308790 170308833 -29321317 + L3b LINE CR1 1530 1572 -11 1816 143 3 55 chr5 170309176 170309505 -29320645 - AluJb SINE Alu 0 312 1 277 115 16 16 chr5 170309796 170309857 -29320293 + (GA)n Simple_repeat Simple_repeat 2 62 0 603 263 122 18 chr5 170310190 170310525 -29319625 + L1ME4a LINE L1 5647 6016 -105 2086 252 69 4 chr5 170311366 170311874 -29318276 + Zaphod DNA AcHobo 2 542 -3489 1017 66 0 0 chr5 170312014 170312135 -29318015 + AluSp SINE Alu 14 134 -179 241 133 50 0 chr5 170312635 170312695 -29317455 + (CAGAGA)n Simple_repeat Simple_repeat 4 66 0 247 231 0 0 chr5 170313439 170313491 -29316659 + L2 LINE L2 3262 3313 0 4102 52 36 39 chr5 170313499 170313691 -29316459 + L1PA7 LINE L1 5597 5788 -366 2349 104 0 9 chr5 170313691 170314007 -29316143 + AluSp SINE Alu 1 313 0 4102 52 36 39 chr5 170314007 170314374 -29315776 + L1PA7 LINE L1 5788 6154 0 422 238 117 42 chr5 170315209 170315423 -29314727 + L2 LINE L2 2920 3149 -164 2317 199 187 28 chr5 170315494 170316302 -29313848 + LTR28 LTR ERV1 2 1020 0 344 286 12 0 chr5 170316303 170316387 -29313763 + L2 LINE L2 3214 3298 -15 562 231 8 8 chr5 170316457 170316587 -29313563 - MIR SINE MIR -63 145 16 281 325 26 13 chr5 170316655 170316806 -29313344 - L2 LINE L2 0 3313 3161 709 204 0 20 chr5 170316837 170316984 -29313166 + MLT1B LTR MaLR 1 144 -246 * 1263 195 116 7 chr5 170316983 170317086 -29313064 + MLT1B LTR MaLR 67 157 -233 1438 185 26 46 chr5 170317086 170317202 -29312948 + AluJo SINE Alu 1 118 -194 2416 99 0 0 chr5 170317202 170317505 -29312645 - AluSx SINE Alu -9 303 1 1438 185 26 46 chr5 170317505 170317690 -29312460 + AluJo SINE Alu 118 296 -16 1263 195 116 7 chr5 170317690 170317878 -29312272 + MLT1B LTR MaLR 157 390 0 2176 80 3 17 chr5 170318276 170318584 -29311566 - AluY SINE Alu 0 304 1 790 232 83 86 chr5 170318798 170319134 -29311016 - MLT1C LTR MaLR 0 467 133 1485 182 27 34 chr5 170319134 170319273 -29310877 + AluJb SINE Alu 1 139 -173 2235 79 48 0 chr5 170319273 170319563 -29310587 + AluY SINE Alu 1 304 -7 1485 182 27 34 chr5 170319563 170319719 -29310431 + AluJb SINE Alu 139 294 -18 2331 103 0 3 chr5 170319720 170320031 -29310119 + AluSx SINE Alu 1 310 -2 2088 125 0 20 chr5 170320148 170320453 -29309697 + AluSx SINE Alu 1 299 -13 201 293 40 0 chr5 170320556 170320631 -29309519 - MIR3 SINE MIR -49 159 82 7107 39 16 9 chr5 170320686 170322280 -29307870 + L1PA7 LINE L1 4549 6149 -5 376 333 8 0 chr5 170322782 170322908 -29307242 - MIR3 SINE MIR -3 205 79 367 273 0 10 chr5 170323166 170323265 -29306885 + MLT1L LTR MaLR 514 611 -4 1973 143 7 7 chr5 170323297 170323591 -29306559 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr5 170323656 170323677 -29306473 + AT_rich Low_complexity Low_complexity 1 21 0 191 61 30 0 chr5 170323682 170323715 -29306435 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 2127 105 0 3 chr5 170323715 170323994 -29306156 - AluSc SINE Alu -31 278 1 258 233 0 17 chr5 170324001 170324061 -29306089 + MIR3 SINE MIR 150 208 0 23 33 0 0 chr5 170324109 170324139 -29306011 + AT_rich Low_complexity Low_complexity 1 30 0 773 232 153 37 chr5 170324145 170324498 -29305652 - L1ME4a LINE L1 -3 6118 5725 2121 132 0 3 chr5 170325718 170326028 -29304122 + AluSx SINE Alu 1 309 -3 2136 90 4 7 chr5 170326349 170326628 -29303522 + AluSq SINE Alu 1 278 -35 192 167 0 0 chr5 170326633 170326681 -29303469 + GA-rich Low_complexity Low_complexity 2 49 0 242 256 244 0 chr5 170376818 170376896 -29253254 - MER5A DNA MER1_type -83 106 10 29 28 0 0 chr5 170377058 170377094 -29253056 + AT_rich Low_complexity Low_complexity 1 36 0 1053 87 214 41 chr5 170377159 170377264 -29252886 + MER30 DNA MER1_type 1 86 -144 324 0 0 0 chr5 170377264 170377300 -29252850 + (TAAAA)n Simple_repeat Simple_repeat 1 36 0 1053 87 214 41 chr5 170377300 170377390 -29252760 + MER30 DNA MER1_type 86 230 0 667 183 34 29 chr5 170377460 170377635 -29252515 - L1MA5 LINE L1 -2 6298 6123 2536 225 89 23 chr5 170377955 170379261 -29250889 - LTR10B-int LTR ERV1 -5549 1218 5 1357 177 68 19 chr5 170379262 170379527 -29250623 - LTR10B LTR ERV1 -1 546 269 2337 82 23 0 chr5 170379589 170379893 -29250257 - AluY SINE Alu 0 311 1 2971 258 63 41 chr5 170379893 170380874 -29249276 - BaEV-int LTR ERV1 -3184 3465 2685 * 3338 250 60 13 chr5 170380862 170381727 -29248423 - BaEV-int LTR ERV1 -4910 1739 834 22 0 0 0 chr5 170381899 170381921 -29248229 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 170382553 170382582 -29247568 + AT_rich Low_complexity Low_complexity 1 29 0 518 174 33 33 chr5 170382629 170382721 -29247429 + FLAM_A SINE Alu 37 128 -14 829 215 0 12 chr5 170384284 170384447 -29245703 + FAM SINE Alu 12 172 -13 1837 151 3 43 chr5 170384447 170384772 -29245378 + AluJb SINE Alu 1 312 0 1279 165 0 24 chr5 170385308 170385514 -29244636 - AluJo SINE Alu -111 201 1 1152 291 147 23 chr5 170385547 170386194 -29243956 - L1MEc LINE L1 -5634 762 36 3102 189 104 35 chr5 170386297 170387066 -29243084 - Charlie1a DNA MER1_type -633 822 1 2014 97 47 7 chr5 170388364 170388664 -29241486 + AluSx SINE Alu 1 312 0 1455 167 17 0 chr5 170388835 170389075 -29241075 + AluSx SINE Alu 56 299 -13 815 166 96 0 chr5 170390675 170390832 -29239318 - AluSc SINE Alu -11 298 127 832 120 56 0 chr5 170391216 170391341 -29238809 - FLAM_C SINE Alu 0 133 2 1214 168 17 99 chr5 170391405 170391452 -29238698 + L1ME1 LINE L1 5549 5598 -566 2151 119 0 19 chr5 170391452 170391634 -29238516 - AluSq SINE Alu 0 313 138 2189 99 0 7 chr5 170391634 170391937 -29238213 - AluSg SINE Alu -9 301 1 2151 119 0 19 chr5 170391937 170392073 -29238077 - AluSq SINE Alu -175 138 1 1214 168 17 99 chr5 170392073 170392317 -29237833 + L1ME1 LINE L1 5598 5819 -345 1795 169 0 0 chr5 170392317 170392625 -29237525 + AluSx SINE Alu 1 308 -4 1244 103 0 0 chr5 170392651 170392826 -29237324 + AluY SINE Alu 133 307 -4 886 221 120 5 chr5 170392827 170393084 -29237066 + L1ME1 LINE L1 5844 6134 -28 1285 122 150 63 chr5 170393105 170393392 -29236758 - AluSx SINE Alu 0 312 1 2183 116 0 0 chr5 170393436 170393746 -29236404 - AluSg SINE Alu 0 310 1 831 152 8 0 chr5 170395368 170395500 -29234650 + FLAM_C SINE Alu 1 133 0 1913 132 28 0 chr5 170395511 170395799 -29234351 + AluSx SINE Alu 3 298 -14 1495 147 61 38 chr5 170395803 170396096 -29234054 + AluJo SINE Alu 3 302 0 324 114 143 29 chr5 170396137 170396207 -29233943 + MER4D LTR ERV1 723 800 -72 31 0 0 0 chr5 170396212 170396243 -29233907 + AT_rich Low_complexity Low_complexity 1 31 0 4088 165 87 26 chr5 170396263 170397083 -29233067 + L1MB2 LINE L1 5301 6170 -1 2126 63 0 63 chr5 170397389 170397719 -29232431 + AluY SINE Alu 1 311 0 24 32 0 0 chr5 170398796 170398827 -29231323 + AT_rich Low_complexity Low_complexity 1 31 0 575 196 10 0 chr5 170399935 170400032 -29230118 + AluJ/FLAM SINE Alu 3 100 -212 593 207 9 0 chr5 170400102 170400218 -29229932 + FLAM_A SINE Alu 1 117 -25 1271 107 0 0 chr5 170400251 170400420 -29229730 + AluSx SINE Alu 1 169 -143 1444 189 25 29 chr5 170400420 170400700 -29229450 - LTR10B LTR ERV1 0 547 269 311 232 122 0 chr5 170400761 170400843 -29229307 - LTR10B LTR ERV1 -262 285 194 12627 273 40 36 chr5 170400933 170402336 -29227814 - LTR10B-int LTR ERV1 -1 7784 6387 2146 105 13 0 chr5 170402336 170402641 -29227509 - AluSc SINE Alu 0 309 1 12627 273 40 36 chr5 170402641 170404500 -29225650 - LTR10B-int LTR ERV1 -1398 6387 4502 2391 70 3 0 chr5 170404500 170404801 -29225349 - AluY SINE Alu -9 302 1 12627 273 40 36 chr5 170404801 170405782 -29224368 - LTR10B-int LTR ERV1 -3283 4502 3526 3407 232 76 18 chr5 170405770 170407692 -29222458 - LTR10B-int LTR ERV1 -4910 1739 5 * 1360 151 75 26 chr5 170407693 170407958 -29222192 - LTR10B LTR ERV1 -1 546 269 2255 85 20 0 chr5 170408020 170408325 -29221825 - AluY SINE Alu 0 311 1 334 195 122 0 chr5 170408352 170408434 -29221716 - LTR10B LTR ERV1 -262 285 194 1162 68 0 0 chr5 170408520 170408667 -29221483 + AluSg/x SINE Alu 164 310 0 1258 158 154 8 chr5 170408680 170408920 -29221230 + AluSx SINE Alu 7 281 -31 1919 138 0 3 chr5 170411354 170411651 -29218499 + AluSx SINE Alu 1 296 -16 2111 112 0 3 chr5 170411738 170412034 -29218116 + AluSg1 SINE Alu 1 295 -14 1703 101 4 0 chr5 170412048 170412276 -29217874 - AluSx SINE Alu -83 229 1 292 212 179 70 chr5 170412420 170412582 -29217568 + MIR SINE MIR 16 212 -50 732 218 122 10 chr5 170412582 170412779 -29217371 - MER20 DNA MER1_type 0 219 1 292 212 179 70 chr5 170412779 170412807 -29217343 + MIR SINE MIR 212 236 -26 21 0 0 0 chr5 170413078 170413099 -29217051 + AT_rich Low_complexity Low_complexity 1 21 0 1065 68 0 0 chr5 170413365 170413498 -29216652 + AluSq/x SINE Alu 1 133 -180 2070 109 0 0 chr5 170413502 170413819 -29216331 + AluSx SINE Alu 1 317 0 2258 102 0 3 chr5 170414986 170415291 -29214859 - AluSx SINE Alu -8 304 1 22 0 0 0 chr5 170416155 170416177 -29213973 + AT_rich Low_complexity Low_complexity 1 22 0 1278 170 38 126 chr5 170416186 170416504 -29213646 + AluJo SINE Alu 3 292 -10 1971 115 6 34 chr5 170416510 170416645 -29213505 + AluSx SINE Alu 1 138 -174 2209 99 0 10 chr5 170416645 170416957 -29213193 + AluSc SINE Alu 1 309 0 1971 115 6 34 chr5 170416957 170417142 -29213008 + AluSx SINE Alu 138 312 0 2256 93 3 0 chr5 170417149 170417459 -29212691 + AluSp SINE Alu 1 311 -2 1998 120 10 16 chr5 170418000 170418309 -29211841 + AluSg1 SINE Alu 1 307 -2 2231 88 0 7 chr5 170418335 170418632 -29211518 + AluSg SINE Alu 5 299 -11 22 56 0 0 chr5 170418731 170418767 -29211383 + AT_rich Low_complexity Low_complexity 1 36 0 1966 128 3 26 chr5 170419639 170419945 -29210205 - AluSx SINE Alu -13 299 1 370 191 16 0 chr5 170420165 170420228 -29209922 + AluS SINE Alu 3 66 -237 935 192 0 0 chr5 170420234 170420401 -29209749 + AluJb SINE Alu 129 295 -17 1028 151 24 0 chr5 170420526 170420692 -29209458 + L1M3 LINE L1 5634 5803 -368 2175 129 39 11 chr5 170420696 170421060 -29209090 - L1M4 LINE L1 -540 5644 5271 1615 144 48 20 chr5 170421504 170421796 -29208354 - AluJb SINE Alu -12 300 1 2421 41 7 0 chr5 170422094 170422389 -29207761 - AluY SINE Alu -14 297 1 619 223 84 133 chr5 170422408 170422740 -29207410 - MER102b DNA MER1_type 0 341 26 976 179 6 0 chr5 170422974 170423136 -29207014 + FAM SINE Alu 1 163 -12 270 81 0 0 chr5 170423517 170423554 -29206596 + (CA)n Simple_repeat Simple_repeat 2 38 0 1678 120 4 0 chr5 170424086 170424327 -29205823 - AluSg SINE Alu -18 292 51 2186 95 0 0 chr5 170424570 170424875 -29205275 + AluY SINE Alu 1 305 -6 1680 137 3 21 chr5 170425968 170426253 -29203897 + AluJb SINE Alu 9 288 -24 207 0 0 0 chr5 170426253 170426276 -29203874 + (CAT)n Simple_repeat Simple_repeat 2 24 0 677 301 40 13 chr5 170427392 170427618 -29202532 + MIR SINE MIR 4 235 -27 192 163 0 0 chr5 170427823 170427866 -29202284 + (GCTG)n Simple_repeat Simple_repeat 2 44 0 21 57 0 0 chr5 170428356 170428391 -29201759 + GC_rich Low_complexity Low_complexity 1 35 0 231 280 104 16 chr5 170429445 170429570 -29200580 + MIR SINE MIR 115 250 -12 2098 88 0 16 chr5 170429609 170429914 -29200236 + AluSx SINE Alu 1 300 -12 2404 51 0 10 chr5 170429991 170430302 -29199848 - AluY SINE Alu -3 308 1 2217 75 0 13 chr5 170430593 170430898 -29199252 - AluY SINE Alu -10 301 1 557 202 0 70 chr5 170431079 170431208 -29198942 - FLAM_A SINE Alu -13 120 1 1612 172 4 4 chr5 170432018 170432297 -29197853 - AluJo SINE Alu -33 279 1 760 188 8 0 chr5 170432308 170432436 -29197714 - FLAM_A SINE Alu -4 129 1 262 221 65 0 chr5 170432438 170432515 -29197635 + L1MC4a LINE L1 5853 5934 -1874 414 305 53 0 chr5 170434358 170434489 -29195661 - L2 LINE L2 -2 3311 3174 2226 106 0 0 chr5 170434594 170434897 -29195253 - AluSx SINE Alu -9 303 1 2310 89 0 0 chr5 170434907 170435210 -29194940 - AluSx SINE Alu -9 303 1 278 263 61 35 chr5 170435529 170435643 -29194507 + MIR3 SINE MIR 61 177 -31 2369 65 0 0 chr5 170435756 170436047 -29194103 + AluY SINE Alu 1 291 -20 421 91 0 0 chr5 170435996 170436051 -29194099 + Alu SINE Alu 239 293 -16 2453 95 0 9 chr5 170436104 170436419 -29193731 + AluSq SINE Alu 1 312 -1 648 148 78 9 chr5 170436639 170436754 -29193396 + FLAM_C SINE Alu 2 124 -19 1982 101 0 12 chr5 170436855 170437112 -29193038 - AluSx SINE Alu -58 254 1 1722 188 3 10 chr5 170437151 170437460 -29192690 - AluJo SINE Alu -5 307 1 781 188 8 0 chr5 170437471 170437599 -29192551 - FLAM_A SINE Alu -4 129 1 249 221 65 0 chr5 170437601 170437678 -29192472 + L1MC4a LINE L1 5853 5934 -1874 417 305 53 0 chr5 170439521 170439652 -29190498 - L2 LINE L2 -2 3311 3174 2348 97 0 10 chr5 170439752 170440061 -29190089 - AluSg SINE Alu -4 306 1 189 343 65 28 chr5 170440345 170440453 -29189697 - MIR SINE MIR -149 113 2 533 236 79 45 chr5 170440790 170440968 -29189182 - MIR SINE MIR -47 215 32 461 239 106 9 chr5 170441648 170441761 -29188389 - MIR3 SINE MIR -52 156 33 265 317 48 28 chr5 170442386 170442531 -29187619 - MIR SINE MIR -35 227 80 244 195 132 26 chr5 170442623 170442714 -29187436 + MIR3 SINE MIR 70 168 -40 950 304 104 24 chr5 170442798 170443213 -29186937 - L2 LINE L2 0 3313 2866 2506 74 0 0 chr5 170443526 170443822 -29186328 + AluSg SINE Alu 3 298 -12 396 235 68 140 chr5 170444037 170444199 -29185951 + L1MC4a LINE L1 6414 6586 -1222 2431 89 0 3 chr5 170444199 170444502 -29185648 - AluSg SINE Alu -8 302 1 847 172 0 0 chr5 170444506 170444634 -29185516 - FLAM_C SINE Alu -5 128 1 396 235 68 140 chr5 170444634 170444730 -29185420 + L1MC4a LINE L1 6589 6658 -1150 5920 90 71 19 chr5 170444743 170445621 -29184529 + Charlie3 DNA MER1_type 1 923 -1787 2231 101 6 31 chr5 170445723 170446041 -29184109 - AluSq SINE Alu -3 310 1 527 150 0 0 chr5 170446042 170446122 -29184028 + FLAM SINE Alu 51 130 -13 305 307 9 9 chr5 170446125 170446239 -29183911 - L1MC4a LINE L1 -1935 5873 5760 1583 113 67 125 chr5 170446541 170446869 -29183281 - AluSx SINE Alu -3 309 1 2445 57 3 17 chr5 170446887 170447186 -29182964 + AluSc SINE Alu 1 295 -14 1629 182 10 14 chr5 170447186 170447477 -29182673 - AluJo SINE Alu -22 290 1 686 166 0 119 chr5 170447674 170447825 -29182325 - FLAM_C SINE Alu 0 133 1 2266 122 0 0 chr5 170448065 170448368 -29181782 - AluSx SINE Alu -9 303 1 2294 112 3 0 chr5 170448420 170448725 -29181425 - AluSx SINE Alu -6 306 1 2455 97 0 0 chr5 170448728 170449038 -29181112 - AluSx SINE Alu -2 310 1 281 263 61 35 chr5 170449357 170449471 -29180679 + MIR3 SINE MIR 61 177 -31 2509 65 0 0 chr5 170449584 170449875 -29180275 + AluY SINE Alu 1 291 -20 2453 95 0 9 chr5 170449932 170450247 -29179903 + AluSq SINE Alu 1 312 -1 1653 185 30 7 chr5 170450466 170450763 -29179387 + AluJo SINE Alu 1 304 -8 840 152 23 0 chr5 170450828 170450960 -29179190 + AluJb SINE Alu 169 303 -9 960 118 0 15 chr5 170451038 170451173 -29178977 + FLAM_C SINE Alu 1 133 0 247 247 200 0 chr5 170451303 170451388 -29178762 + L2 LINE L2 3169 3270 -2 270 0 0 0 chr5 170451423 170451453 -29178697 + (CA)n Simple_repeat Simple_repeat 2 31 0 329 316 0 73 chr5 170451591 170451621 -29178529 + MIR3 SINE MIR 58 89 -119 2334 77 0 58 chr5 170451621 170451933 -29178217 + AluSc SINE Alu 1 294 -15 329 316 0 73 chr5 170451933 170452038 -29178112 + MIR3 SINE MIR 89 183 -25 634 203 127 44 chr5 170452090 170452248 -29177902 - AluJo SINE Alu -139 173 3 1345 132 184 49 chr5 170453321 170453493 -29176657 - AluJo SINE Alu 0 302 155 2258 119 3 0 chr5 170453493 170453786 -29176364 - AluSx SINE Alu -18 294 1 1345 132 184 49 chr5 170453786 170453879 -29176271 - AluJo SINE Alu -147 155 1 262 303 40 0 chr5 170454289 170454365 -29175785 + L2 LINE L2 3194 3272 0 683 136 7 107 chr5 170454752 170454892 -29175258 + AluJo/FLAM SINE Alu 2 127 -175 2423 89 0 29 chr5 170454893 170455209 -29174941 + AluSg SINE Alu 1 307 -3 2163 100 0 28 chr5 170455219 170455547 -29174603 + AluSg SINE Alu 1 320 0 2225 106 7 7 chr5 170455685 170455986 -29174164 + AluSx SINE Alu 1 301 -11 299 303 137 29 chr5 170456684 170456859 -29173291 - L3b LINE CR1 -189 1394 1201 1885 154 0 69 chr5 170456872 170457190 -29172960 + AluJb SINE Alu 1 296 -16 851 136 0 57 chr5 170457200 170457340 -29172810 + FLAM_A SINE Alu 1 132 -1 337 210 0 0 chr5 170457341 170457403 -29172747 + AluJ/FLAM SINE Alu 14 75 -227 31 0 0 0 chr5 170457449 170457480 -29172670 + AT_rich Low_complexity Low_complexity 1 31 0 414 271 90 19 chr5 170457610 170457765 -29172385 + MIR3 SINE MIR 38 203 -5 226 261 97 8 chr5 170457770 170457904 -29172246 + MER117 DNA MER1_type 2 147 -50 23 0 0 0 chr5 170457949 170457972 -29172178 + AT_rich Low_complexity Low_complexity 1 23 0 1844 176 6 16 chr5 170458049 170458362 -29171788 - AluJb SINE Alu -2 310 1 2228 126 0 3 chr5 170458371 170458680 -29171470 - AluSx SINE Alu -4 308 1 2262 60 4 0 chr5 170458856 170459123 -29171027 + AluY SINE Alu 31 298 -13 377 117 4 0 chr5 170459212 170459271 -29170879 + FLAM_A SINE Alu 71 123 -10 580 178 0 0 chr5 170460303 170460393 -29169757 + AluJ/FLAM SINE Alu 10 99 -213 285 51 0 0 chr5 170460412 170460451 -29169699 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1950 126 6 74 chr5 170460748 170461074 -29169076 + AluSx SINE Alu 1 304 -8 2006 137 16 22 chr5 170461525 170461839 -29168311 + AluSx SINE Alu 1 312 0 2483 66 0 3 chr5 170461842 170462146 -29168004 + AluY SINE Alu 1 303 -8 610 187 137 14 chr5 170462298 170462437 -29167713 - MER5B DNA MER1_type -7 171 16 280 308 19 56 chr5 170463392 170463499 -29166651 + L2 LINE L2 3160 3262 -10 223 120 80 13 chr5 170463627 170463702 -29166448 + (TA)n Simple_repeat Simple_repeat 1 80 0 2176 109 10 10 chr5 170463755 170464057 -29166093 + AluSg SINE Alu 1 302 -8 2169 129 0 26 chr5 170464069 170464378 -29165772 + AluSx SINE Alu 1 301 -11 2197 104 3 3 chr5 170464397 170464684 -29165466 + AluSx SINE Alu 12 298 -14 498 253 165 36 chr5 170465195 170465222 -29164928 - L1ME4a LINE L1 -2 6119 6097 2359 68 41 0 chr5 170465222 170465516 -29164634 + AluY SINE Alu 1 306 -5 498 253 165 36 chr5 170465516 170465876 -29164274 - L1ME4a LINE L1 -24 6097 5682 242 156 22 0 chr5 170465948 170465993 -29164157 - L1ME4a LINE L1 -536 5585 5540 1014 190 0 6 chr5 170466107 170466286 -29163864 + AluJb SINE Alu 135 312 0 279 282 48 78 chr5 170467058 170467161 -29162989 - MIR SINE MIR -86 122 23 342 265 68 17 chr5 170468157 170468274 -29161876 - MIR SINE MIR -131 131 9 815 262 143 76 chr5 170468375 170468532 -29161618 + L2 LINE L2 1232 1377 -1937 1991 117 96 0 chr5 170468532 170468813 -29161337 + AluSx SINE Alu 3 310 -2 815 262 143 76 chr5 170468813 170468826 -29161324 + L2 LINE L2 1377 1388 -1926 1863 170 0 13 chr5 170468826 170469132 -29161018 + AluJo SINE Alu 5 306 -6 815 262 143 76 chr5 170469132 170469395 -29160755 + L2 LINE L2 1388 1695 -1619 266 0 29 0 chr5 170469397 170469431 -29160719 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 763 244 82 52 chr5 170469435 170469574 -29160576 + AluJo SINE Alu 3 136 -166 1915 171 3 0 chr5 170469574 170469873 -29160277 + AluJo SINE Alu 1 300 -12 1462 164 0 49 chr5 170469875 170470119 -29160031 + AluJo SINE Alu 1 232 -80 763 244 82 52 chr5 170470119 170470254 -29159896 + AluJo SINE Alu 136 292 -10 369 43 0 0 chr5 170470254 170470301 -29159849 + (CA)n Simple_repeat Simple_repeat 2 48 0 763 244 82 52 chr5 170470301 170470313 -29159837 + AluJo SINE Alu 292 302 0 216 288 61 15 chr5 170470319 170470385 -29159765 + L2 LINE L2 1761 1829 -1485 2258 101 7 10 chr5 170470393 170470700 -29159450 - AluSx SINE Alu -6 306 1 465 242 87 95 chr5 170470731 170470962 -29159188 - L1MC4 LINE L1 -5 8037 7809 2660 223 67 45 chr5 170470963 170471166 -29158984 + L2 LINE L2 1821 2018 -1296 2383 93 6 3 chr5 170471166 170471477 -29158673 - AluSx SINE Alu 0 312 1 2660 223 67 45 chr5 170471477 170472054 -29158096 + L2 LINE L2 2018 2618 -696 2379 79 24 0 chr5 170472054 170472345 -29157805 - AluSg SINE Alu -12 298 1 2129 107 7 17 chr5 170472349 170472640 -29157510 - AluSc SINE Alu -21 288 1 1346 167 138 29 chr5 170472641 170472916 -29157234 - AluJo SINE Alu -7 305 1 582 254 48 18 chr5 170472916 170473081 -29157069 + L2 LINE L2 3144 3313 0 2017 149 3 10 chr5 170474409 170474710 -29155440 + AluJb SINE Alu 1 299 -13 210 347 42 11 chr5 170474926 170475021 -29155129 - MIR SINE MIR -118 144 47 369 286 88 23 chr5 170475360 170475448 -29154702 - MIR SINE MIR 0 262 181 1656 137 3 113 chr5 170475448 170475638 -29154512 - AluJo SINE Alu -3 299 160 2068 109 4 4 chr5 170475638 170475913 -29154237 - AluSg SINE Alu -35 275 1 1656 137 3 113 chr5 170475913 170476057 -29154093 - AluJo SINE Alu -142 160 2 369 286 88 23 chr5 170476057 170476139 -29154011 - MIR SINE MIR -81 181 81 469 324 57 28 chr5 170476799 170476975 -29153175 - MER5A DNA MER1_type -2 187 7 282 294 154 0 chr5 170476988 170477131 -29153019 - MER5A DNA MER1_type -1 188 24 273 29 0 0 chr5 170481158 170481192 -29148958 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 231 284 0 0 chr5 170482799 170482873 -29147277 + T-rich Low_complexity Low_complexity 1 74 0 204 40 0 0 chr5 170483334 170483359 -29146791 + (TA)n Simple_repeat Simple_repeat 1 25 0 528 338 94 0 chr5 170483975 170484188 -29145962 - MIR SINE MIR -15 247 15 236 203 234 0 chr5 170484647 170484711 -29145439 + MIR SINE MIR 178 256 -6 2649 80 2 75 chr5 170484728 170484906 -29145244 + THE1C LTR MaLR 5 140 -235 2369 89 3 0 chr5 170484906 170485197 -29144953 + AluSg SINE Alu 1 292 -18 2649 80 2 75 chr5 170485197 170485418 -29144732 + THE1C LTR MaLR 140 375 0 277 293 89 41 chr5 170485923 170486046 -29144104 - MIR SINE MIR -60 148 20 187 247 164 27 chr5 170486505 170486578 -29143572 + MIR SINE MIR 121 203 -59 651 185 34 62 chr5 170486702 170486848 -29143302 + MER58B DNA MER1_type 200 341 0 2130 119 3 3 chr5 170486936 170487248 -29142902 + AluSx SINE Alu 1 312 0 302 320 20 30 chr5 170487250 170487350 -29142800 - MIR SINE MIR -93 115 17 785 186 0 0 chr5 170487369 170487487 -29142663 + FLAM_C SINE Alu 1 118 -15 1709 126 35 0 chr5 170487608 170487893 -29142257 - MER44D DNA MER2_type -41 568 4 324 337 0 0 chr5 170487973 170488074 -29142076 - MIR SINE MIR -11 251 151 277 231 0 31 chr5 170488066 170488131 -29142019 - L2 LINE L2 -2 3270 3208 * 201 368 26 45 chr5 170488136 170488291 -29141859 - MIR SINE MIR -110 152 1 1638 155 49 18 chr5 170488566 170488685 -29141465 + AluJb SINE Alu 1 115 -197 180 0 0 0 chr5 170488685 170488705 -29141445 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1638 155 49 18 chr5 170488705 170488869 -29141281 + AluJb SINE Alu 115 293 -19 1663 161 0 7 chr5 170488907 170489186 -29140964 + AluJb SINE Alu 1 277 -35 522 195 0 0 chr5 170489186 170489297 -29140853 + AluJb SINE Alu 197 307 0 238 239 155 0 chr5 170489992 170490063 -29140087 - MIR SINE MIR -70 192 111 427 297 18 0 chr5 170490459 170490570 -29139580 - L2 LINE L2 -1 3312 3200 596 229 164 28 chr5 170490615 170490829 -29139321 + MIR SINE MIR 5 247 -15 281 358 68 7 chr5 170490834 170490982 -29139168 + L2 LINE L2 2933 3089 -183 200 330 80 40 chr5 170491078 170491178 -29138972 + L2 LINE L2 3169 3272 0 1304 182 44 18 chr5 170491329 170491604 -29138546 + AluJo SINE Alu 1 282 -30 1861 72 0 24 chr5 170491604 170491764 -29138386 - AluSx SINE Alu -19 293 137 2041 75 34 20 chr5 170491764 170492057 -29138093 - AluSp SINE Alu -16 297 1 1861 72 0 24 chr5 170492057 170492138 -29138012 - AluSx SINE Alu -175 137 56 1631 153 19 53 chr5 170492145 170492329 -29137821 - AluSx SINE Alu -2 310 140 2010 111 17 0 chr5 170492329 170492626 -29137524 - AluSx SINE Alu -10 302 1 1631 153 19 53 chr5 170492626 170492762 -29137388 - AluSx SINE Alu -172 140 1 356 240 95 10 chr5 170492828 170492944 -29137206 - MIR SINE MIR -72 136 31 2082 116 0 13 chr5 170493381 170493684 -29136466 + AluSc SINE Alu 1 299 -10 549 260 6 41 chr5 170493688 170493857 -29136293 + MIR SINE MIR 49 211 -51 * 1091 216 19 10 chr5 170493854 170494062 -29136088 + MIR SINE MIR 52 261 -1 439 238 16 13 chr5 170494106 170494236 -29135914 - MIR SINE MIR -62 146 53 2094 98 0 3 chr5 170494253 170494540 -29135610 + AluSc SINE Alu 1 286 -23 2748 3 0 0 chr5 170494542 170494846 -29135304 + AluYa5 SINE Alu 1 304 -7 228 250 77 0 chr5 170494934 170494986 -29135164 + Charlie8 DNA MER1_type 25 80 -2337 198 337 11 32 chr5 170495184 170495279 -29134871 - L2 LINE L2 -214 3058 2966 1961 131 0 0 chr5 170495558 170495865 -29134285 + AluSx SINE Alu 1 307 0 2339 89 0 0 chr5 170495869 170496182 -29133968 + AluSq SINE Alu 1 313 0 488 263 66 0 chr5 170496348 170496500 -29133650 + MER103 DNA DNA 4 165 -1 1248 150 0 83 chr5 170496719 170496914 -29133236 - AluJb SINE Alu -1 311 140 1789 141 21 0 chr5 170496914 170497198 -29132952 - AluSx SINE Alu -22 290 1 1248 150 0 83 chr5 170497198 170497255 -29132895 - AluJb SINE Alu -172 140 80 405 296 228 33 chr5 170497753 170498152 -29131998 + L2 LINE L2 2834 3310 -3 309 320 8 33 chr5 170498151 170498273 -29131877 + MIR3 SINE MIR 81 199 -9 * 206 310 69 23 chr5 170498692 170498779 -29131371 - L3 LINE CR1 -113 1464 1374 690 239 71 5 chr5 170498806 170498990 -29131160 + MIR SINE MIR 2 197 -65 2312 82 0 3 chr5 170499064 170499368 -29130782 - AluSp SINE Alu -10 303 1 23 0 0 0 chr5 170499368 170499391 -29130759 + AT_rich Low_complexity Low_complexity 1 23 0 787 156 0 0 chr5 170499439 170499561 -29130589 - FLAM_C SINE Alu -21 122 1 222 319 14 14 chr5 170499669 170499741 -29130409 + MIR SINE MIR 78 149 -59 838 164 0 0 chr5 170499779 170499907 -29130243 + FLAM_C SINE Alu 1 128 -15 2132 74 0 18 chr5 170500158 170500467 -29129683 + AluY SINE Alu 1 304 0 27 0 0 0 chr5 170500499 170500526 -29129624 + AT_rich Low_complexity Low_complexity 1 27 0 865 218 0 0 chr5 170500526 170500705 -29129445 - FRAM SINE Alu 0 176 1 2036 99 27 7 chr5 170500868 170501162 -29128988 - AluSx SINE Alu -12 300 1 1706 99 4 8 chr5 170501805 170502048 -29128102 + AluSg/x SINE Alu 69 310 0 1135 128 2 17 chr5 170502114 170502137 -29128013 + L1MB2 LINE L1 5416 5438 -733 2154 117 0 0 chr5 170502137 170502437 -29127713 + AluSx SINE Alu 1 300 -12 1135 128 2 17 chr5 170502437 170502612 -29127538 + L1MB2 LINE L1 5438 5608 -563 1904 142 0 0 chr5 170502612 170502941 -29127209 + AluSx SINE Alu 1 329 0 1560 154 0 29 chr5 170502945 170503083 -29127067 + AluJo SINE Alu 1 129 -183 2085 127 3 0 chr5 170503083 170503390 -29126760 + AluSq SINE Alu 2 309 -4 1560 154 0 29 chr5 170503390 170503530 -29126620 + AluJo SINE Alu 129 271 -41 22 80 0 0 chr5 170503546 170503596 -29126554 + AT_rich Low_complexity Low_complexity 1 50 0 2120 100 0 10 chr5 170503607 170503937 -29126213 + AluSq SINE Alu 1 327 0 342 61 0 0 chr5 170504149 170504198 -29125952 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 3433 126 12 37 chr5 170504198 170504269 -29125881 + L1MB2 LINE L1 5604 5675 -496 2110 97 10 3 chr5 170504269 170504559 -29125591 - AluSx SINE Alu -20 292 1 3433 126 12 37 chr5 170504559 170505060 -29125090 + L1MB2 LINE L1 5675 6162 -9 247 182 0 0 chr5 170505226 170505270 -29124880 + L1ME4a LINE L1 5979 6022 -99 356 240 64 165 chr5 170505473 170505550 -29124600 - MIR SINE MIR -21 241 158 1922 108 0 4 chr5 170505550 170505819 -29124331 - AluSq SINE Alu -16 297 30 356 240 64 165 chr5 170505819 170505869 -29124281 - MIR SINE MIR -104 158 105 2033 137 0 0 chr5 170505869 170506176 -29123974 + AluSx SINE Alu 1 307 -5 356 240 64 165 chr5 170506176 170506236 -29123914 - MIR SINE MIR -157 105 85 769 187 0 8 chr5 170506236 170506370 -29123780 + FLAM_C SINE Alu 1 133 0 356 240 64 165 chr5 170506370 170506447 -29123703 - MIR SINE MIR -177 85 2 458 326 90 0 chr5 170507139 170507317 -29122833 - MER117 DNA MER1_type 0 197 4 238 366 24 32 chr5 170507351 170507474 -29122676 - MIR3 SINE MIR -72 136 15 285 51 0 0 chr5 170507523 170507562 -29122588 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 805 75 0 0 chr5 170507567 170507673 -29122477 - AluSg/x SINE Alu -36 276 171 2119 78 21 0 chr5 170507690 170507972 -29122178 - AluSc SINE Alu -15 294 7 253 322 0 11 chr5 170508007 170508097 -29122053 + MIR SINE MIR 65 153 -109 220 216 39 0 chr5 170508315 170508366 -29121784 - L2 LINE L2 -225 3047 2995 1631 104 166 8 chr5 170508601 170508860 -29121290 + AluSg SINE Alu 1 300 0 465 214 159 44 chr5 170508860 170508954 -29121196 + L1ME3A LINE L1 5965 6047 -123 2083 107 0 7 chr5 170508954 170509252 -29120898 + AluSg SINE Alu 1 296 -14 465 214 159 44 chr5 170509252 170509339 -29120811 + L1ME3A LINE L1 6047 6167 -3 1045 82 0 0 chr5 170509393 170509528 -29120622 + AluSg/x SINE Alu 157 291 -21 493 176 69 82 chr5 170509624 170509822 -29120328 - MLT1H LTR MaLR -7 548 348 692 205 20 13 chr5 170509822 170509973 -29120177 + LTR41 LTR ERVL 1 152 -621 1959 232 111 38 chr5 170510534 170511112 -29119038 + LTR41 LTR ERVL 152 771 -2 877 254 187 55 chr5 170511115 170511458 -29118692 - MLT1H LTR MaLR -203 392 5 311 320 75 27 chr5 170511470 170511617 -29118533 + MER5A DNA MER1_type 35 188 -1 1929 134 0 0 chr5 170511636 170511920 -29118230 - AluSx SINE Alu -8 304 21 1515 158 42 42 chr5 170511943 170512278 -29117872 - L1MA8 LINE L1 -5 6286 5952 459 277 162 65 chr5 170512290 170512611 -29117539 - L1MCc LINE L1 -4782 2161 1810 1900 145 64 17 chr5 170512665 170513023 -29117127 + THE1C LTR MaLR 1 375 0 263 303 57 35 chr5 170513023 170513454 -29116696 - L1MCc LINE L1 -4939 1484 1221 2062 119 3 0 chr5 170513586 170513888 -29116262 + AluSx SINE Alu 1 303 -9 1489 156 120 33 chr5 170514158 170514318 -29115832 - AluJo SINE Alu -2 300 155 2206 107 0 0 chr5 170514318 170514616 -29115534 - AluSg1 SINE Alu -11 298 1 1489 156 120 33 chr5 170514616 170514730 -29115420 - AluJo SINE Alu -147 155 2 1933 144 3 3 chr5 170514760 170515059 -29115091 + AluJb SINE Alu 1 299 -13 348 259 9 60 chr5 170515391 170515507 -29114643 + MIR SINE MIR 117 226 -36 742 246 32 27 chr5 170515906 170516093 -29114057 + MIR SINE MIR 5 192 -70 498 230 9 143 chr5 170516591 170516745 -29113405 + MIR3 SINE MIR 18 136 -72 2281 99 0 0 chr5 170516745 170517047 -29113103 + AluSx SINE Alu 1 302 -10 498 230 9 143 chr5 170517047 170517109 -29113041 + MIR3 SINE MIR 136 205 -3 215 292 213 12 chr5 170517990 170518113 -29112037 - MIR3 SINE MIR -67 141 9 210 282 48 58 chr5 170518211 170518314 -29111836 + MIR3 SINE MIR 61 162 -46 1851 148 3 16 chr5 170518354 170518664 -29111486 - AluJb SINE Alu -5 307 2 1952 171 48 73 chr5 170518924 170518988 -29111162 + Charlie4a DNA MER1_type 1 65 -1896 1755 187 10 0 chr5 170518988 170519293 -29110857 - AluJo SINE Alu -4 308 1 1952 171 48 73 chr5 170519293 170519495 -29110655 + Charlie4a DNA MER1_type 65 271 -1690 2019 117 3 0 chr5 170519495 170519816 -29110334 - AluSx SINE Alu 0 322 1 1952 171 48 73 chr5 170519816 170519847 -29110303 + Charlie4a DNA MER1_type 271 301 -1660 2129 120 0 0 chr5 170519847 170520146 -29110004 - AluSx SINE Alu -13 299 1 1952 171 48 73 chr5 170520146 170520366 -29109784 + Charlie4a DNA MER1_type 301 508 0 350 338 69 14 chr5 170520691 170520836 -29109314 + MIR3 SINE MIR 1 153 -55 381 311 117 22 chr5 170520842 170521022 -29109128 - MER117 DNA MER1_type 0 197 1 1862 151 6 42 chr5 170521036 170521368 -29108782 + 7SLRNA srpRNA srpRNA 1 320 0 1513 174 3 20 chr5 170521510 170521809 -29108341 + AluJo SINE Alu 6 299 -13 192 77 0 0 chr5 170521833 170521859 -29108291 + (TG)n Simple_repeat Simple_repeat 2 27 0 229 306 28 0 chr5 170522285 170522357 -29107793 - MIR SINE MIR -86 122 49 655 194 39 186 chr5 170522385 170522637 -29107513 - MER102a DNA MER1_type -1087 330 43 1579 186 6 6 chr5 170522637 170522948 -29107202 - AluJb SINE Alu -1 311 1 655 194 39 186 chr5 170522948 170522977 -29107173 - MER102a DNA MER1_type -1374 43 11 2082 114 0 7 chr5 170522977 170523275 -29106875 + AluSx SINE Alu 1 296 -16 655 194 39 186 chr5 170523275 170523305 -29106845 - MER102a DNA MER1_type -1406 11 82 1926 141 0 3 chr5 170523305 170523604 -29106546 + AluSx SINE Alu 1 298 -14 655 194 39 186 chr5 170523604 170523677 -29106473 - MER102a DNA MER1_type -1334 83 1 450 370 62 9 chr5 170523684 170523908 -29106242 + MIR SINE MIR 16 251 -11 1947 72 93 0 chr5 170524183 170524461 -29105689 + AluSp SINE Alu 1 304 -9 1842 113 0 0 chr5 170524619 170524876 -29105274 - AluSx SINE Alu -55 257 1 251 272 75 68 chr5 170524895 170525024 -29105126 + L1ME4a LINE L1 5685 5812 -309 2167 74 3 26 chr5 170525024 170525334 -29104816 + AluY SINE Alu 1 303 -8 251 272 75 68 chr5 170525334 170525498 -29104652 + L1ME4a LINE L1 5812 5980 -141 783 102 0 116 chr5 170525698 170525845 -29104305 - FLAM_C SINE Alu -1 132 3 767 279 92 32 chr5 170525863 170526297 -29103853 + L1MC4a LINE L1 5711 6170 -1638 276 200 0 57 chr5 170526701 170526771 -29103379 - L2 LINE L2 0 3313 3248 434 212 166 1 chr5 170526992 170527169 -29102981 + L1MB8 LINE L1 5101 5322 -824 1663 169 0 22 chr5 170527176 170527495 -29102655 + AluJo SINE Alu 1 312 0 2509 181 39 97 chr5 170527497 170528233 -29101917 + L1MB8 LINE L1 5480 6173 -5 730 260 109 0 chr5 170528446 170528638 -29101512 - MER58C DNA MER1_type -2 213 1 304 264 42 0 chr5 170529338 170529410 -29100740 - MIR SINE MIR -67 141 67 1009 84 22 89 chr5 170529501 170529680 -29100470 + Tigger2a DNA MER2_type 1 167 -267 * 1527 122 107 134 chr5 170529665 170529797 -29100353 + Tigger2 DNA MER2_type 2336 2470 -248 397 164 0 0 chr5 170529797 170529864 -29100286 - L1PA15 LINE L1 -9 6156 6090 1527 122 107 134 chr5 170529864 170530125 -29100025 + Tigger2 DNA MER2_type 2470 2718 0 195 311 40 0 chr5 170530267 170530341 -29099809 - MER5A DNA MER1_type -52 137 61 243 328 92 23 chr5 170530935 170531066 -29099084 - MIR SINE MIR -51 211 72 220 299 78 39 chr5 170533284 170533361 -29096789 + L2 LINE L2 3171 3250 -22 267 348 110 8 chr5 170533394 170533512 -29096638 + L2 LINE L2 3143 3272 0 218 336 175 31 chr5 170533486 170533832 -29096318 - L2 LINE L2 -1 3271 2888 * 300 234 32 53 chr5 170534448 170534542 -29095608 - MIR SINE MIR -60 148 57 250 272 46 84 chr5 170535621 170535860 -29094290 + L1MC5 LINE L1 5588 5817 -1991 2118 108 4 4 chr5 170535868 170536185 -29093965 + AluSc SINE Alu 1 317 0 1243 200 118 15 chr5 170536236 170536506 -29093644 + AluJo SINE Alu 1 298 -14 418 188 7 81 chr5 170536508 170536657 -29093493 + L1MC5 LINE L1 5746 5883 -1925 1678 158 30 27 chr5 170537051 170537349 -29092801 + AluJo SINE Alu 6 304 -8 2543 87 3 0 chr5 170537497 170537808 -29092342 + AluSq SINE Alu 1 312 -1 629 199 13 26 chr5 170537863 170538014 -29092136 + L1MC5 LINE L1 6643 6791 -1170 1209 197 117 93 chr5 170538017 170538652 -29091498 + L1MC5 LINE L1 6876 7525 -436 854 146 16 0 chr5 170538670 170538793 -29091357 - FLAM_C SINE Alu -18 125 1 313 245 76 86 chr5 170538793 170538827 -29091323 + L1MC5 LINE L1 7462 7495 -466 211 71 48 0 chr5 170538827 170538869 -29091281 + (TA)n Simple_repeat Simple_repeat 1 44 0 313 245 76 86 chr5 170538869 170539173 -29090977 + L1MC5 LINE L1 7495 7757 -204 883 189 69 74 chr5 170539182 170539532 -29090618 + L1MC5 LINE L1 7570 7917 -44 551 302 73 44 chr5 170540222 170540470 -29089680 + MIR SINE MIR 1 255 -7 190 269 45 30 chr5 170541545 170541612 -29088538 + MIR SINE MIR 86 153 -55 274 278 103 24 chr5 170541622 170541748 -29088402 + MLT1J LTR MaLR 1 136 -375 334 261 33 0 chr5 170541922 170542014 -29088136 + MLT1J LTR MaLR 377 471 -40 192 321 0 0 chr5 170542507 170542563 -29087587 + L3 LINE CR1 1508 1563 -14 526 270 103 32 chr5 170542972 170543157 -29086993 + MIR SINE MIR 8 205 -57 1143 211 0 5 chr5 170543159 170543372 -29086778 - MER8 DNA MER2_type 0 239 28 2005 116 19 0 chr5 170543521 170543789 -29086361 + AluSx SINE Alu 1 273 -39 918 110 0 0 chr5 170543789 170543905 -29086245 + AluSg/x SINE Alu 190 308 -2 2189 130 3 0 chr5 170543913 170544220 -29085930 + AluSq SINE Alu 1 308 -5 481 238 54 7 chr5 170545274 170545421 -29084729 + L1ME LINE L1 5618 5771 -350 651 156 0 0 chr5 170545508 170545604 -29084546 - AluS SINE Alu -216 96 1 2281 115 3 3 chr5 170547355 170547660 -29082490 + AluSp SINE Alu 1 305 -8 325 225 271 8 chr5 170547660 170547789 -29082361 - MIR3 SINE MIR -11 197 35 2371 72 10 3 chr5 170548193 170548484 -29081666 + AluSq SINE Alu 1 293 -20 184 270 68 54 chr5 170548753 170548827 -29081323 + MIR3 SINE MIR 129 203 -5 226 254 222 16 chr5 170548957 170549083 -29081067 + MIR SINE MIR 109 260 -2 366 276 201 15 chr5 170550160 170550359 -29079791 + L2 LINE L2 3029 3264 -8 736 289 65 4 chr5 170550755 170550987 -29079163 - MIR SINE MIR -5 257 12 282 267 200 7 chr5 170552280 170552430 -29077720 - MIR SINE MIR 0 262 84 207 266 151 75 chr5 170552446 170552645 -29077505 + L2 LINE L2 2988 3201 -112 1081 112 56 0 chr5 170552666 170552845 -29077305 + MER30 DNA MER1_type 1 189 -41 2363 66 3 17 chr5 170552908 170553209 -29076941 - AluY SINE Alu -1 310 14 2236 99 0 23 chr5 170553451 170553754 -29076396 - AluSx SINE Alu -16 296 1 361 212 248 22 chr5 170553879 170554016 -29076134 - MIR3 SINE MIR -20 188 21 2502 87 3 0 chr5 170554726 170555035 -29075115 + AluSp SINE Alu 1 310 -3 219 235 198 0 chr5 170555343 170555424 -29074726 + MIR SINE MIR 102 198 -64 774 120 84 30 chr5 170555522 170555689 -29074461 + MER53 DNA DNA 2 177 -12 315 333 25 54 chr5 170555748 170555952 -29074198 + MIR3 SINE MIR 6 203 -5 365 253 72 45 chr5 170556011 170556134 -29074016 - MER5A DNA MER1_type -15 163 24 2515 58 3 0 chr5 170556256 170556550 -29073600 - AluY SINE Alu -12 299 5 302 181 139 14 chr5 170556581 170556653 -29073497 + Tigger3(Golem) DNA MER2_type 2 82 -2947 22 0 0 0 chr5 170556672 170556694 -29073456 + AT_rich Low_complexity Low_complexity 1 22 0 1236 92 71 0 chr5 170556694 170556890 -29073260 - L1MA3 LINE L1 0 6305 6096 22 35 0 0 chr5 170556897 170556926 -29073224 + AT_rich Low_complexity Low_complexity 1 29 0 1345 154 63 46 chr5 170556962 170557002 -29073148 + Tigger3(Golem) DNA MER2_type 2740 2778 -251 1999 115 0 64 chr5 170557002 170557315 -29072835 - AluSx SINE Alu -19 293 1 1345 154 63 46 chr5 170557315 170557559 -29072591 + Tigger3(Golem) DNA MER2_type 2778 3029 0 736 168 0 8 chr5 170558388 170558507 -29071643 - FLAM_C SINE Alu -15 118 1 315 298 141 45 chr5 170558535 170558733 -29071417 - MIR SINE MIR 0 262 46 1186 164 0 6 chr5 170559024 170559201 -29070949 - AluJb SINE Alu -14 298 123 1480 196 43 11 chr5 170559227 170559507 -29070643 - AluJo SINE Alu -23 289 1 278 231 162 43 chr5 170560868 170560985 -29069165 + MIR3 SINE MIR 1 131 -77 308 198 58 23 chr5 170561288 170561374 -29068776 + MER44D DNA MER2_type 33 391 -218 207 0 0 0 chr5 170561532 170561555 -29068595 + (A)n Simple_repeat Simple_repeat 1 23 0 2205 111 24 0 chr5 170561555 170561852 -29068298 + AluSp SINE Alu 1 304 -9 1316 130 65 9 chr5 170561852 170562082 -29068068 + MER44D DNA MER2_type 462 704 -1 712 166 294 13 chr5 170562153 170562388 -29067762 + MER33 DNA MER1_type 2 302 -22 637 236 30 36 chr5 170563019 170563184 -29066966 + MIR SINE MIR 24 187 -75 2245 106 3 0 chr5 170563404 170563705 -29066445 - AluSx SINE Alu -10 302 1 198 282 107 19 chr5 170563732 170563835 -29066315 - MIR3 SINE MIR -94 114 3 412 246 139 82 chr5 170564320 170564637 -29065513 + L2 LINE L2 2570 2904 -410 283 167 33 0 chr5 170565336 170565396 -29064754 - L1MB8 LINE L1 -5 6173 6112 1622 134 17 4 chr5 170565397 170565635 -29064515 + AluSx SINE Alu 1 241 -71 2283 89 0 4 chr5 170565655 170565978 -29064172 + AluSg SINE Alu 1 322 0 201 284 181 9 chr5 170566140 170566256 -29063894 + L2 LINE L2 3137 3272 0 * 254 315 182 32 chr5 170566232 170566572 -29063578 - L3 LINE CR1 -7 1570 1180 393 314 145 14 chr5 170567245 170567452 -29062698 - MIR SINE MIR -26 236 3 417 324 34 7 chr5 170567498 170567646 -29062504 + MIR3 SINE MIR 54 205 -3 212 312 110 7 chr5 170568232 170568386 -29061764 + L2 LINE L2 2682 2851 -463 277 143 312 0 chr5 170568614 170568691 -29061459 + L2 LINE L2 3213 3313 0 661 245 228 80 chr5 170568708 170568842 -29061308 - L2 LINE L2 0 3313 3200 1766 176 0 11 chr5 170568842 170569126 -29061024 + AluJb SINE Alu 1 281 -31 661 245 228 80 chr5 170569126 170569601 -29060549 - L2 LINE L2 -113 3200 2797 2305 119 0 0 chr5 170569601 170569913 -29060237 - AluSx SINE Alu 0 312 1 1657 157 80 7 chr5 170569915 170570201 -29059949 - AluJo SINE Alu -5 307 1 2464 81 0 3 chr5 170570211 170570507 -29059643 - AluSx SINE Alu -15 297 3 1739 151 7 43 chr5 170570512 170570816 -29059334 - AluJo SINE Alu -19 293 1 661 245 228 80 chr5 170570816 170570880 -29059270 - L2 LINE L2 -526 2787 2734 921 196 0 6 chr5 170570880 170571038 -29059112 - FRAM SINE Alu -9 157 1 661 245 228 80 chr5 170571038 170571114 -29059036 - L2 LINE L2 -579 2734 2414 338 331 43 25 chr5 170571100 170571174 -29058976 + MIR SINE MIR 93 164 -98 * 2336 94 10 3 chr5 170571174 170571481 -29058669 + AluSp SINE Alu 1 309 -4 338 331 43 25 chr5 170571481 170571569 -29058581 + MIR SINE MIR 164 258 -4 2287 104 0 13 chr5 170572266 170572575 -29057575 - AluSg SINE Alu -4 306 2 265 86 0 0 chr5 170573443 170573478 -29056672 + U2 snRNA snRNA 1 35 -153 250 209 198 51 chr5 170573565 170573742 -29056408 - L1MC5 LINE L1 -268 7693 7491 312 347 20 34 chr5 170574146 170574293 -29055857 - MIR3 SINE MIR -15 193 49 2137 78 14 18 chr5 170574293 170574617 -29055533 + AluSx SINE Alu 1 323 0 1391 144 36 16 chr5 170574617 170574867 -29055283 - MER47A DNA MER2_type -111 255 1 192 156 0 44 chr5 170575206 170575251 -29054899 - MIR SINE MIR -55 153 111 698 248 50 20 chr5 170575286 170575484 -29054666 - MIR SINE MIR -29 233 30 399 199 0 46 chr5 170576607 170576758 -29053392 + G-rich Low_complexity Low_complexity 3 146 0 28 102 0 0 chr5 170577430 170577528 -29052622 + GC_rich Low_complexity Low_complexity 1 98 0 22 0 0 0 chr5 170578435 170578457 -29051693 + GC_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr5 170579101 170579128 -29051022 + GC_rich Low_complexity Low_complexity 1 27 0 33 107 0 0 chr5 170579200 170579331 -29050819 + GC_rich Low_complexity Low_complexity 1 131 0 320 292 71 9 chr5 170580051 170580164 -29049986 + MIR SINE MIR 30 149 -59 483 231 164 51 chr5 170580197 170580453 -29049697 - L2 LINE L2 -3 3310 3026 259 260 144 29 chr5 170580426 170580530 -29049620 - MER5A DNA MER1_type -38 151 36 * 861 156 0 14 chr5 170581105 170581246 -29048904 - FRAM SINE Alu -45 131 1 2238 98 21 0 chr5 170581593 170581880 -29048270 - AluSx SINE Alu -19 293 1 298 275 110 46 chr5 170581897 170582006 -29048144 - MIR3 SINE MIR -11 197 82 252 143 0 0 chr5 170783073 170783115 -28847035 + (TG)n Simple_repeat Simple_repeat 1 42 0 192 97 0 0 chr5 170783601 170783632 -28846518 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 195 317 79 40 chr5 170783743 170783844 -28846306 - L2 LINE L2 -27 3245 3141 185 375 125 0 chr5 170783944 170784072 -28846078 - L2 LINE L2 -270 3043 2900 245 235 88 81 chr5 170784289 170784425 -28845725 + L2 LINE L2 3075 3211 -102 708 288 63 24 chr5 170784584 170785101 -28845049 - MLT1H1 LTR MaLR 0 590 1 554 296 45 31 chr5 170785175 170785398 -28844752 + MIR SINE MIR 18 243 -19 746 22 0 0 chr5 170787010 170787101 -28843049 - 5S rRNA rRNA -30 91 1 2276 57 3 0 chr5 170787374 170787657 -28842493 + L1PA7 LINE L1 5868 6151 -3 297 0 0 0 chr5 170788081 170788114 -28842036 + (CA)n Simple_repeat Simple_repeat 2 34 0 22 56 0 0 chr5 170788240 170788276 -28841874 + AT_rich Low_complexity Low_complexity 1 36 0 2149 132 0 0 chr5 170789870 170790165 -28839985 - AluSc SINE Alu -14 295 1 376 278 53 70 chr5 170790211 170790398 -28839752 - MLT1K LTR MaLR -41 547 364 806 244 35 8 chr5 170790838 170791096 -28839054 + L1MC3 LINE L1 5259 5523 -2285 942 152 43 5 chr5 170791165 170791349 -28838801 + MER39B LTR ERV1 463 653 0 433 156 0 180 chr5 170791349 170791433 -28838717 + L1MC3 LINE L1 6655 6710 -1075 2273 121 3 0 chr5 170791433 170791738 -28838412 - AluSx SINE Alu -6 306 1 433 156 0 180 chr5 170791738 170791781 -28838369 + L1MC3 LINE L1 6710 6759 -1026 747 161 146 20 chr5 170791881 170791954 -28838196 + L1MC3 LINE L1 6763 6825 -960 198 0 0 0 chr5 170791954 170791976 -28838174 + (CA)n Simple_repeat Simple_repeat 1 22 0 2048 67 0 142 chr5 170791976 170792335 -28837815 + AluSc SINE Alu 1 308 -1 747 161 146 20 chr5 170792335 170792459 -28837691 + L1MC3 LINE L1 6824 6986 -799 262 137 27 14 chr5 170792873 170792946 -28837204 + L1MD3 LINE L1 7000 7073 -922 1386 197 39 37 chr5 170792962 170793009 -28837141 - Charlie1b DNA MER1_type -2378 383 338 3794 133 36 22 chr5 170793009 170793698 -28836452 + LTR34 LTR ERV1 1 699 0 1386 197 39 37 chr5 170793698 170794031 -28836119 - Charlie1b DNA MER1_type -2423 338 2 1386 200 36 48 chr5 170794032 170794506 -28835644 + L1MC5 LINE L1 7330 7797 -164 22 0 0 30 chr5 170795089 170795105 -28835045 + AT_rich Low_complexity Low_complexity 1 16 -16 2129 143 0 0 chr5 170795105 170795413 -28834737 + AluSx SINE Alu 1 308 -4 22 0 0 30 chr5 170795413 170795429 -28834721 + AT_rich Low_complexity Low_complexity 16 32 0 645 160 0 0 chr5 170796502 170796608 -28833542 - Tigger7 DNA MER2_type 0 2587 2482 949 221 52 5 chr5 170796609 170796822 -28833328 - Tigger7 DNA MER2_type -2253 234 12 499 176 184 0 chr5 170796899 170797035 -28833115 + L1MA9 LINE L1 6119 6279 -33 2352 99 3 3 chr5 170797255 170797567 -28832583 + AluSx SINE Alu 1 312 0 1153 156 0 0 chr5 170797571 170797744 -28832406 + AluSg/x SINE Alu 129 301 -11 254 293 99 38 chr5 170798274 170798486 -28831664 - L2 LINE L2 0 3313 3089 1837 115 26 69 chr5 170799344 170799648 -28830502 - AluSg SINE Alu -19 291 1 27 73 0 0 chr5 170799760 170799815 -28830335 + AT_rich Low_complexity Low_complexity 1 55 0 364 422 44 4 chr5 170799926 170800196 -28829954 - L2 LINE L2 -103 3169 2889 256 239 0 0 chr5 170800279 170800325 -28829825 - L3 LINE CR1 -14 1563 1518 393 365 108 14 chr5 170801391 170801613 -28828537 + MIR SINE MIR 7 249 -13 1539 218 37 13 chr5 170802069 170802450 -28827700 + MLT1B LTR MaLR 1 390 0 505 308 16 53 chr5 170802460 170802687 -28827463 + MIR SINE MIR 33 252 -10 219 260 118 88 chr5 170803587 170803695 -28826455 + L3b LINE CR1 1219 1322 -261 182 37 37 0 chr5 170803695 170803722 -28826428 + (TAA)n Simple_repeat Simple_repeat 2 29 0 219 260 118 88 chr5 170803722 170803735 -28826415 + L3b LINE CR1 1322 1333 -250 2203 109 0 10 chr5 170803735 170804029 -28826121 + AluSx SINE Alu 21 311 -1 219 260 118 88 chr5 170804029 170804110 -28826040 + L3b LINE CR1 1333 1428 -155 259 236 321 21 chr5 170804321 170804461 -28825689 + MIR SINE MIR 3 184 -78 191 313 16 117 chr5 170804495 170804623 -28825527 - MIR SINE MIR -87 175 61 2409 87 0 50 chr5 170804711 170805034 -28825116 + AluSp SINE Alu 1 307 -6 501 199 36 169 chr5 170805184 170805516 -28824634 + MLT1J LTR MaLR 221 508 -3 274 200 0 18 chr5 170805569 170805624 -28824526 - MER81 DNA DNA -55 59 6 1042 332 87 32 chr5 170805867 170806586 -28823564 - L2 LINE L2 0 3272 2496 2234 124 0 3 chr5 170806654 170806982 -28823168 + AluSx SINE Alu 1 312 0 25 0 0 0 chr5 170807759 170807784 -28822366 + AT_rich Low_complexity Low_complexity 1 25 0 21 21 0 64 chr5 170808177 170808224 -28821926 + AT_rich Low_complexity Low_complexity 1 44 0 370 279 137 2 chr5 170808303 170808490 -28821660 - MIR SINE MIR 0 262 9 1037 259 150 10 chr5 170809148 170809561 -28820589 + MLT2B1 LTR ERVL 3 473 -47 468 130 0 0 chr5 170809563 170809655 -28820495 + (TAGA)n Simple_repeat Simple_repeat 1 92 0 287 309 184 0 chr5 170810264 170810400 -28819750 + MER91A DNA MER1_type 1 161 -35 339 343 52 0 chr5 170810540 170810674 -28819476 + L2 LINE L2 3123 3263 -9 248 184 11 126 chr5 170810750 170810837 -28819313 - MIR SINE MIR -60 202 126 22 35 0 0 chr5 170810853 170810882 -28819268 + AT_rich Low_complexity Low_complexity 1 29 0 423 289 48 44 chr5 170810929 170811078 -28819072 - L1ME4a LINE L1 -262 5859 5707 2273 100 0 7 chr5 170811078 170811379 -28818771 + AluY SINE Alu 1 299 -12 423 289 48 44 chr5 170811379 170811502 -28818648 - L1ME4a LINE L1 -414 5707 5586 255 320 60 0 chr5 170811636 170811736 -28818414 - MIR SINE MIR 0 262 157 1624 199 30 0 chr5 170811969 170812144 -28818006 - AluJb SINE Alu -5 307 118 306 106 0 0 chr5 170812144 170812191 -28817959 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1624 199 30 0 chr5 170812191 170812311 -28817839 - AluJb SINE Alu -194 118 3 767 273 88 21 chr5 170812980 170813218 -28816932 + MIR SINE MIR 9 262 0 533 256 106 6 chr5 170813513 170813673 -28816477 - MIR3 SINE MIR -15 193 18 1710 202 0 0 chr5 170813870 170814167 -28815983 + AluJb SINE Alu 1 297 -15 334 337 53 37 chr5 170815095 170815338 -28814812 + L1ME4a LINE L1 5317 5563 -2245 368 307 58 23 chr5 170815359 170815701 -28814449 + L1ME4a LINE L1 5591 5944 -177 2098 153 48 25 chr5 170816084 170816484 -28813666 + Tigger2a DNA MER2_type 1 409 -25 196 286 52 52 chr5 170816628 170816705 -28813445 + L2 LINE L2 3195 3271 -1 2146 131 131 8 chr5 170816828 170817209 -28812941 + MSTA LTR MaLR 1 428 0 352 348 79 57 chr5 170818078 170818569 -28811581 - L2 LINE L2 0 3313 2812 199 232 58 116 chr5 170818693 170818762 -28811388 + L2 LINE L2 3208 3272 0 197 310 35 11 chr5 170819386 170819473 -28810677 + L2 LINE L2 2697 2785 -529 223 259 0 0 chr5 170820201 170820259 -28809891 + MIR SINE MIR 4 61 -201 242 266 116 58 chr5 170820267 170820440 -28809710 + L2 LINE L2 3130 3312 -1 21 0 0 0 chr5 170821605 170821626 -28808524 + AT_rich Low_complexity Low_complexity 1 21 0 801 214 0 12 chr5 170822555 170822723 -28807427 - MER20 DNA MER1_type -51 168 3 303 371 69 26 chr5 170823186 170823418 -28806732 - MIR SINE MIR -11 251 10 1541 249 48 14 chr5 170823453 170823895 -28806255 + LTR16C LTR ERVL 32 488 -3 21 0 0 0 chr5 170823992 170824013 -28806137 + AT_rich Low_complexity Low_complexity 1 21 0 504 276 55 6 chr5 170824085 170824248 -28805902 + L1ME1 LINE L1 213 383 -6013 552 253 52 28 chr5 170824265 170824514 -28805636 + L1ME1 LINE L1 910 1164 -5232 207 200 60 0 chr5 170824538 170824588 -28805562 + (CATA)n Simple_repeat Simple_repeat 2 54 0 1013 208 42 16 chr5 170824589 170824901 -28805249 + L1ME1 LINE L1 2051 2370 -4026 2173 230 48 35 chr5 170824916 170825336 -28804814 + L1ME1 LINE L1 5241 5654 -581 1959 146 0 10 chr5 170825336 170825638 -28804512 + AluSx SINE Alu 1 299 -13 2173 230 48 35 chr5 170825638 170826032 -28804118 + L1ME1 LINE L1 5654 6067 -168 911 239 44 16 chr5 170826150 170826468 -28803682 - L1MEc LINE L1 -4019 2377 2051 455 265 7 0 chr5 170826533 170826680 -28803470 - L1MEc LINE L1 -5232 1164 1017 386 283 43 0 chr5 170826673 170826811 -28803339 + L1MA10 LINE L1 6188 6331 -3 * 409 254 91 9 chr5 170827133 170827243 -28802907 + MER5A DNA MER1_type 10 128 -61 1583 167 80 0 chr5 170827439 170827605 -28802545 - AluJb SINE Alu 0 308 157 189 74 0 0 chr5 170827605 170827632 -28802518 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1583 167 80 0 chr5 170827632 170827752 -28802398 - AluJb SINE Alu -151 157 1 806 246 125 37 chr5 170827766 170828119 -28802031 - L1ME2 LINE L1 -10 6154 5771 207 261 0 0 chr5 170829477 170829523 -28800627 - L2 LINE L2 -2 3311 3266 2175 101 3 55 chr5 170829806 170830132 -28800018 + AluSc SINE Alu 1 309 0 1355 184 34 41 chr5 170830750 170831016 -28799134 - AluJo SINE Alu -48 264 1 245 296 111 15 chr5 170831071 170831206 -28798944 - MIR SINE MIR -58 204 57 2818 6 0 3 chr5 170832000 170832312 -28797838 + AluYa5 SINE Alu 1 311 0 722 302 145 28 chr5 170832535 170833195 -28796955 - L2 LINE L2 0 3313 2581 412 290 61 15 chr5 170833592 170833685 -28796465 - MIR SINE MIR -6 256 154 5756 195 33 53 chr5 170833685 170833783 -28796367 - Charlie1a DNA MER1_type -1306 1455 1357 531 0 0 0 chr5 170833783 170833842 -28796308 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 5756 195 33 53 chr5 170833842 170835227 -28794923 - Charlie1a DNA MER1_type -1404 1357 1 412 290 61 15 chr5 170835227 170835264 -28794886 - MIR SINE MIR -108 154 120 302 263 25 12 chr5 170835436 170835516 -28794634 - MIR SINE MIR -156 106 26 472 316 117 5 chr5 170836444 170836650 -28793500 - MIR SINE MIR -1 261 33 2004 159 0 0 chr5 170836764 170837059 -28793091 - AluSx SINE Alu -17 295 1 631 200 0 57 chr5 170837072 170837212 -28792938 - FLAM_C SINE Alu 0 133 2 278 284 20 81 chr5 170837888 170838036 -28792114 + L2 LINE L2 3175 3313 0 308 227 0 27 chr5 170838151 170838226 -28791924 - MIR SINE MIR -70 192 120 227 278 18 142 chr5 170838243 170838412 -28791738 + MIR SINE MIR 1 148 -114 1948 104 11 14 chr5 170838427 170838736 -28791414 + AluSc SINE Alu 1 308 0 938 190 181 0 chr5 170838831 170839047 -28791103 + MIR SINE MIR 2 256 -6 320 250 76 38 chr5 170840916 170841048 -28789102 + MIR SINE MIR 117 253 -9 315 0 0 0 chr5 170841060 170841095 -28789055 + (CA)n Simple_repeat Simple_repeat 1 35 0 362 170 134 15 chr5 170841994 170842091 -28788059 + L1PB3 LINE L1 5813 5919 -235 1504 157 18 21 chr5 170842103 170842383 -28787767 + L1PB4 LINE L1 5865 6143 -13 2761 227 74 35 chr5 170843037 170844119 -28786031 + L1ME2 LINE L1 5032 6154 -10 1948 9 0 0 chr5 170844757 170844979 -28785171 - L1PA2 LINE L1 0 6155 5934 22 0 0 0 chr5 170845090 170845112 -28785038 + AT_rich Low_complexity Low_complexity 1 22 0 279 244 278 0 chr5 170846165 170846280 -28783870 + MIR SINE MIR 109 255 -7 401 224 67 52 chr5 170846459 170846593 -28783557 + MER103 DNA DNA 1 136 -30 1061 286 89 55 chr5 170846844 170847429 -28782721 - MLT1L LTR MaLR -10 605 1 203 317 110 0 chr5 170848482 170848564 -28781586 - MIR SINE MIR -78 184 94 320 336 109 14 chr5 170848787 170849007 -28781143 + MIR SINE MIR 18 258 -4 281 366 0 0 chr5 170849735 170849828 -28780322 - MIR3 SINE MIR -25 183 91 12995 139 58 22 chr5 170849951 170850004 -28780146 - Tigger1 DNA MER2_type 0 2418 2368 279 0 0 0 chr5 170850004 170850035 -28780115 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 12995 139 58 22 chr5 170850035 170850820 -28779330 - Tigger1 DNA MER2_type -50 2368 1613 1212 165 131 22 chr5 170850820 170851087 -28779063 - AluJo SINE Alu -16 296 1 12995 139 58 22 chr5 170851087 170852578 -28777572 - Tigger1 DNA MER2_type -805 1613 3 351 287 78 17 chr5 170852582 170852697 -28777453 - MIR SINE MIR -67 141 20 654 293 45 27 chr5 170853376 170853598 -28776552 + MIR SINE MIR 24 249 -13 259 341 70 39 chr5 170853878 170854007 -28776143 - L2 LINE L2 -6 3266 3134 230 290 14 0 chr5 170854825 170854894 -28775256 - MLT1K LTR MaLR 0 588 519 339 203 0 0 chr5 170855188 170855262 -28774888 + (TG)n Simple_repeat Simple_repeat 1 74 0 613 262 151 0 chr5 170856215 170856421 -28773729 + MIR SINE MIR 25 261 -1 643 287 98 29 chr5 170856545 170856789 -28773361 - MIR SINE MIR 0 262 2 988 241 74 59 chr5 170857077 170857533 -28772617 - MER39 LTR ERV1 0 707 53 262 305 102 39 chr5 170857767 170857895 -28772255 + L2 LINE L2 3112 3247 -25 206 306 56 14 chr5 170858704 170858776 -28771374 - MER5A DNA MER1_type -18 171 97 1581 152 72 4 chr5 170859049 170859313 -28770837 + AluJb SINE Alu 1 282 -30 623 78 11 0 chr5 170859313 170859403 -28770747 + (TAGA)n Simple_repeat Simple_repeat 1 91 0 344 274 26 34 chr5 170860033 170860150 -28770000 + MIR3 SINE MIR 60 175 -33 225 0 0 0 chr5 170860270 170860295 -28769855 + (T)n Simple_repeat Simple_repeat 1 25 0 769 272 31 35 chr5 170860837 170860893 -28769257 - MER102a DNA MER1_type -1088 329 274 2339 105 3 0 chr5 170860893 170861199 -28768951 + AluSc SINE Alu 1 307 -2 769 272 31 35 chr5 170861199 170861396 -28768754 - MER102a DNA MER1_type -1143 274 77 806 112 14 35 chr5 170861409 170861552 -28768598 - L1MA6 LINE L1 -427 5873 5734 2116 186 9 25 chr5 170861552 170861986 -28768164 + L1MA6 LINE L1 5872 6300 0 235 328 112 15 chr5 170862298 170862432 -28767718 + MIR SINE MIR 46 192 -70 3088 114 40 22 chr5 170862438 170862938 -28767212 - Tigger3(Golem) DNA MER2_type -1 3028 2520 782 223 20 0 chr5 170862957 170863105 -28767045 - Tigger3(Golem) DNA MER2_type -2877 152 2 3192 131 30 27 chr5 170863183 170863708 -28766442 + MER1A DNA MER1_type 1 527 0 190 338 0 27 chr5 170864897 170864971 -28765179 + MIR SINE MIR 16 87 -121 249 62 0 104 chr5 170865058 170865106 -28765044 + AluJb SINE Alu 27 69 -234 1490 146 0 34 chr5 170865130 170865369 -28764781 + AluJb SINE Alu 64 294 -18 28 29 0 0 chr5 170865372 170865407 -28764743 + AT_rich Low_complexity Low_complexity 1 35 0 3839 141 53 22 chr5 170865753 170866484 -28763666 - Tigger3(Golem) DNA MER2_type -3 3026 2273 499 252 0 27 chr5 170866470 170866581 -28763569 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 418 308 39 0 chr5 170866594 170866724 -28763426 + L2 LINE L2 3179 3313 0 265 191 206 53 chr5 170867327 170867458 -28762692 - MLT1L LTR MaLR -104 511 361 267 334 48 43 chr5 170867638 170867874 -28762276 - L2 LINE L2 -248 3024 2778 2130 24 0 0 chr5 170869135 170869382 -28760768 - L1PA3 LINE L1 0 6155 5909 472 200 61 9 chr5 170869533 170869648 -28760502 - L1MA10 LINE L1 -18 6316 6196 2050 123 7 3 chr5 170869742 170870042 -28760108 + AluSq SINE Alu 1 301 -12 218 354 13 0 chr5 170870202 170870281 -28759869 - MIR SINE MIR -79 129 50 264 264 60 72 chr5 170870816 170870983 -28759167 + MIR SINE MIR 41 205 -57 211 398 49 0 chr5 170871119 170871242 -28758908 - MIR3 SINE MIR -13 195 67 350 333 126 17 chr5 170871290 170871464 -28758686 + MIR SINE MIR 56 248 -14 457 219 0 0 chr5 170873058 170873154 -28756996 - L1MB5 LINE L1 -6 6168 6073 24 67 0 0 chr5 170873230 170873275 -28756875 + AT_rich Low_complexity Low_complexity 1 45 0 253 313 12 12 chr5 170873603 170873686 -28756464 + MIR SINE MIR 68 150 -58 202 253 228 0 chr5 170873692 170873771 -28756379 - L2 LINE L2 -7 3265 3169 269 271 125 10 chr5 170873835 170873931 -28756219 - MLT2F LTR ERVL -547 116 10 13867 148 30 16 chr5 170874273 170874309 -28755841 + Tigger1 DNA MER2_type 3 37 -2381 2734 88 3 0 chr5 170874309 170874663 -28755487 + THE1A LTR MaLR 1 355 0 13867 148 30 16 chr5 170874663 170877010 -28753140 + Tigger1 DNA MER2_type 37 2418 0 228 293 104 47 chr5 170877033 170877139 -28753011 + L2 LINE L2 3200 3311 -2 318 303 112 26 chr5 170877142 170877294 -28752856 - MIR SINE MIR -49 213 49 221 208 0 21 chr5 170877588 170877636 -28752514 + L2 LINE L2 3265 3311 -2 282 56 0 0 chr5 170880000 170880036 -28750114 + (TG)n Simple_repeat Simple_repeat 2 37 0 287 275 6 50 chr5 170881452 170881634 -28748516 + CT-rich Low_complexity Low_complexity 3 176 0 270 320 93 7 chr5 170881958 170882108 -28748042 + L3 LINE CR1 1187 1349 -228 21 57 0 0 chr5 170882452 170882487 -28747663 + AT_rich Low_complexity Low_complexity 1 35 0 530 254 42 58 chr5 170882697 170882886 -28747264 - MIR3 SINE MIR -4 204 19 269 246 0 31 chr5 170883058 170883123 -28747027 - L2 LINE L2 -3 3310 3248 705 222 48 22 chr5 170883866 170884096 -28746054 - MER106A DNA MER1_type 0 236 1 297 312 19 52 chr5 170886012 170886166 -28743984 + MIR SINE MIR 114 262 0 2138 139 0 0 chr5 170886999 170887308 -28742842 + AluSx SINE Alu 2 310 -2 447 353 0 0 chr5 170887875 170888011 -28742139 - MIR3 SINE MIR -14 194 59 270 289 149 26 chr5 170888520 170888634 -28741516 - L2 LINE L2 -4 3309 3182 356 366 118 8 chr5 170888876 170889130 -28741020 - L2 LINE L2 -679 2635 2354 545 286 62 60 chr5 170889167 170889611 -28740539 - LTR16A LTR ERVL -13 437 2 446 316 110 44 chr5 170889650 170890261 -28739889 - L2 LINE L2 -1055 2259 1609 190 270 127 0 chr5 170890825 170890888 -28739262 + MIR SINE MIR 73 143 -65 285 226 58 44 chr5 170891918 170892055 -28738095 + Charlie7 DNA MER1_type 2469 2607 -5 990 230 28 35 chr5 170894008 170894291 -28735859 - MLT1C LTR MaLR 0 467 187 1829 176 0 3 chr5 170894331 170894627 -28735523 - AluJo SINE Alu -9 303 9 812 191 0 0 chr5 170894640 170894781 -28735369 - FLAM_C SINE Alu -2 141 1 605 200 23 0 chr5 170894782 170894912 -28735238 - MLT1C LTR MaLR -280 187 55 354 292 45 39 chr5 170895276 170895584 -28734566 + L1ME4a LINE L1 5611 5920 -201 859 244 24 10 chr5 170895594 170895803 -28734347 + MER20 DNA MER1_type 1 212 -7 449 298 13 7 chr5 170895833 170895984 -28734166 + MIR SINE MIR 110 261 -1 1993 239 62 11 chr5 170896056 170896603 -28733547 - MER90 LTR ERV1 0 575 1 2261 114 3 16 chr5 170897104 170897420 -28732730 + AluSx SINE Alu 1 312 0 22 88 0 0 chr5 170897669 170897726 -28732424 + AT_rich Low_complexity Low_complexity 1 57 0 2320 98 3 0 chr5 170898595 170898900 -28731250 - AluSx SINE Alu -6 306 1 271 320 62 10 chr5 170899171 170899268 -28730882 + MIR SINE MIR 19 120 -88 281 291 55 0 chr5 170899288 170899398 -28730752 - MER117 DNA MER1_type -7 190 75 1746 158 21 63 chr5 170899758 170900137 -28730013 + MER47A DNA MER2_type 2 364 -2 755 319 101 5 chr5 170900564 170900991 -28729159 + MLT1K LTR MaLR 114 581 -7 199 281 31 31 chr5 170902850 170902914 -28727236 + L3 LINE CR1 1509 1572 -5 212 281 31 31 chr5 170903862 170903926 -28726224 + MIR SINE MIR 37 100 -162 1870 189 25 6 chr5 170903929 170904284 -28725866 - MLT1A1 LTR MaLR -3 362 1 430 266 65 58 chr5 170905074 170905228 -28724922 - MIR3 SINE MIR -10 198 44 336 353 93 57 chr5 170905235 170905688 -28724462 + L2 LINE L2 2804 3272 0 459 316 80 17 chr5 170905719 170905956 -28724194 + MIR SINE MIR 9 260 -2 783 271 61 95 chr5 170906778 170907349 -28722801 + LTR67 LTR ERVL 2 553 -4 448 307 124 45 chr5 170907439 170907817 -28722333 - L2 LINE L2 0 3313 2906 7230 184 41 21 chr5 170907836 170909463 -28720687 - MER52A LTR ERV1 0 1755 1 188 432 0 0 chr5 170909463 170909544 -28720606 - MIR SINE MIR -171 91 11 235 293 37 49 chr5 170909782 170909864 -28720286 - L2 LINE L2 -58 3214 3134 204 216 0 39 chr5 170909966 170910017 -28720133 - L2 LINE L2 -251 3062 3014 256 283 29 94 chr5 170910026 170910164 -28719986 - MIR3 SINE MIR -71 137 9 570 268 16 44 chr5 170910862 170911045 -28719105 - MIR SINE MIR -33 229 52 1644 148 34 12 chr5 170911164 170911488 -28718662 + L1MA8 LINE L1 5956 6286 -5 2180 126 0 19 chr5 170911496 170911814 -28718336 + AluSx SINE Alu 1 312 0 1993 131 13 17 chr5 170911976 170912274 -28717876 - AluSx SINE Alu -15 297 1 625 305 15 10 chr5 170912475 170912672 -28717478 + MIR SINE MIR 11 208 -54 2162 114 3 7 chr5 170912701 170913023 -28717127 + AluSg SINE Alu 1 321 0 2200 180 8 18 chr5 170913072 170913472 -28716678 - MSTD LTR MaLR 0 396 1 258 265 30 18 chr5 170913572 170913783 -28716367 + (TTA)n Simple_repeat Simple_repeat 1 213 0 1005 252 89 87 chr5 170914188 170914412 -28715738 + L1ME LINE L1 21 243 -5827 513 110 0 0 chr5 170914412 170914503 -28715647 + (TATG)n Simple_repeat Simple_repeat 2 92 0 1005 252 89 87 chr5 170914503 170915056 -28715094 + L1ME LINE L1 243 799 -5271 209 352 95 29 chr5 170915119 170915224 -28714926 - MIR SINE MIR -116 146 35 238 297 302 10 chr5 170915238 170915430 -28714720 + MIR SINE MIR 10 257 -5 212 341 0 23 chr5 170915557 170915645 -28714505 - L2 LINE L2 -1 3271 3186 23 0 0 0 chr5 170915675 170915698 -28714452 + AT_rich Low_complexity Low_complexity 1 23 0 632 291 88 33 chr5 170916032 170916338 -28713812 - L3 LINE CR1 -155 1422 1100 335 353 110 0 chr5 170916744 170916880 -28713270 - L2 LINE L2 -1 3271 3121 21 0 0 0 chr5 170917049 170917070 -28713080 + AT_rich Low_complexity Low_complexity 1 21 0 347 326 56 21 chr5 170917450 170917594 -28712556 + L3 LINE CR1 1329 1477 -100 626 310 142 38 chr5 170917723 170918602 -28711548 - L2 LINE L2 -2 3311 2325 619 287 25 13 chr5 170918588 170918819 -28711331 - MIR SINE MIR -13 249 16 * 209 299 124 51 chr5 170919307 170919444 -28710706 - MIR3 SINE MIR -52 156 10 307 280 32 11 chr5 170919562 170919655 -28710495 - MIR SINE MIR -54 208 114 405 0 0 0 chr5 170919687 170919732 -28710418 + (TG)n Simple_repeat Simple_repeat 2 46 0 414 277 57 14 chr5 170919889 170920030 -28710120 + MIR SINE MIR 25 171 -91 365 328 35 18 chr5 170920197 170920368 -28709782 + MIR SINE MIR 12 185 -77 866 181 7 0 chr5 170920532 170920681 -28709469 + AluSg/x SINE Alu 133 282 -28 23 0 0 0 chr5 170920693 170920716 -28709434 + AT_rich Low_complexity Low_complexity 1 23 0 537 337 35 0 chr5 170921759 170921958 -28708192 - MIR SINE MIR -17 245 40 1206 216 12 0 chr5 170921984 170922238 -28707912 + MER58B DNA MER1_type 75 331 -10 335 278 33 26 chr5 170922448 170922599 -28707551 - MLT1K LTR MaLR -17 571 420 306 329 47 13 chr5 170922826 170922975 -28707175 - MLT1K LTR MaLR -333 255 102 1185 263 103 7 chr5 170923611 170924048 -28706102 + L1ME3A LINE L1 5669 6147 -23 222 338 35 75 chr5 170925481 170925709 -28704441 + L2 LINE L2 2862 3080 -192 586 301 13 0 chr5 170925719 170925875 -28704275 + MER58A DNA MER1_type 19 176 -48 303 299 34 34 chr5 170925908 170926025 -28704125 + L2 LINE L2 3137 3253 -19 231 349 72 24 chr5 170926305 170926471 -28703679 - MIR SINE MIR -5 257 84 232 247 37 49 chr5 170926992 170927073 -28703077 + L2 LINE L2 3190 3269 -44 240 163 0 0 chr5 170927088 170927131 -28703019 - MLT2C2 LTR ERVL -2 462 420 1635 246 9 60 chr5 170927136 170927665 -28702485 - MLT2B1 LTR ERVL -18 502 1 1187 212 119 47 chr5 170928919 170929348 -28700802 - MLT1C LTR MaLR -2 465 6 394 277 48 43 chr5 170929420 170929608 -28700542 - L2 LINE L2 -185 3128 2940 533 241 96 45 chr5 170929635 170929855 -28700295 + LTR16A LTR ERVL 18 248 -202 * 1490 194 53 66 chr5 170929840 170930277 -28699873 - MLT1D LTR MaLR -74 431 1 611 311 155 0 chr5 170930277 170930528 -28699622 - L2 LINE L2 -1780 1534 1245 739 312 24 12 chr5 170930634 170930881 -28699269 - MIR SINE MIR -11 251 2 536 268 103 42 chr5 170931054 170931267 -28698883 + MIR SINE MIR 34 259 -3 551 249 37 91 chr5 170932142 170932383 -28697767 - MIR SINE MIR -19 243 16 186 219 12 24 chr5 170932513 170932595 -28697555 + CT-rich Low_complexity Low_complexity 5 85 0 539 284 84 28 chr5 170934407 170934622 -28695528 - MIR SINE MIR -33 229 3 464 294 136 27 chr5 170935231 170935561 -28694589 + MARNA DNA Mariner 52 417 -169 592 309 11 17 chr5 170935920 170936152 -28693998 - MIR SINE MIR -10 252 25 24 91 0 0 chr5 170936178 170936244 -28693906 + AT_rich Low_complexity Low_complexity 1 66 0 1863 130 47 0 chr5 170936752 170937029 -28693121 - AluSx SINE Alu -22 290 1 233 286 126 25 chr5 170937065 170937184 -28692966 - MIR SINE MIR -62 146 16 2824 123 7 2 chr5 170937886 170938315 -28691835 + LTR3 LTR ERVK 1 431 -1 431 346 17 6 chr5 170938704 170938883 -28691267 + MIR SINE MIR 48 228 -34 534 250 29 52 chr5 170938962 170939134 -28691016 + MIR SINE MIR 24 191 -71 615 108 0 0 chr5 170939338 170939431 -28690719 + (TG)n Simple_repeat Simple_repeat 2 94 0 1943 155 15 12 chr5 170940782 170941118 -28689032 + MER44D DNA MER2_type 1 607 -2 350 248 103 30 chr5 170941528 170941762 -28688388 - L1MC4a LINE L1 -1913 5895 5645 22 0 0 0 chr5 170942024 170942046 -28688104 + AT_rich Low_complexity Low_complexity 1 22 0 299 332 96 15 chr5 170942189 170942388 -28687762 + MIR SINE MIR 32 246 -16 400 275 118 50 chr5 170943014 170943276 -28686874 - L2 LINE L2 -34 3279 3000 239 221 103 0 chr5 170943340 170943408 -28686742 - MIR SINE MIR -88 174 100 505 325 96 45 chr5 170944755 170945244 -28684906 - L1ME4a LINE L1 -5 6116 5603 370 306 68 25 chr5 170945274 170945509 -28684641 - L1ME4a LINE L1 -2267 5541 5297 359 344 38 8 chr5 170946282 170946413 -28683737 + MIR SINE MIR 29 163 -99 265 282 186 16 chr5 170946790 170946914 -28683236 - MIR3 SINE MIR -7 201 57 186 233 0 0 chr5 170947949 170948009 -28682141 + (CAT)n Simple_repeat Simple_repeat 3 62 0 849 159 203 6 chr5 170948080 170948262 -28681888 + MER20 DNA MER1_type 1 218 -1 260 123 49 49 chr5 170948305 170948386 -28681764 - L1M4 LINE L1 -2190 3956 3876 2493 89 0 0 chr5 170948399 170948712 -28681438 - AluSq SINE Alu 0 313 1 432 346 0 0 chr5 170949282 170949412 -28680738 - MIR SINE MIR -24 238 109 210 250 128 47 chr5 170949827 170949975 -28680175 + L2 LINE L2 2858 3017 -255 411 280 34 0 chr5 170950185 170950303 -28679847 + L2 LINE L2 3192 3313 0 1596 181 10 10 chr5 170950596 170950889 -28679261 + AluSc SINE Alu 1 293 -16 21 57 0 0 chr5 170951021 170951056 -28679094 + AT_rich Low_complexity Low_complexity 1 35 0 277 296 43 43 chr5 170951153 170951268 -28678882 - MER5A DNA MER1_type -5 184 70 274 54 27 0 chr5 170952247 170952284 -28677866 + L2 LINE L2 3217 3254 -18 887 266 25 7 chr5 170952358 170952731 -28677419 - LTR16A LTR ERVL -14 436 19 883 235 48 61 chr5 170952793 170953172 -28676978 + MLT1A2 LTR MaLR 1 374 0 2415 76 0 10 chr5 170953233 170953567 -28676583 + AluY SINE Alu 1 331 0 293 288 144 0 chr5 170956127 170956238 -28673912 - MIR SINE MIR -89 173 47 2014 129 0 4 chr5 170956250 170956529 -28673621 - AluSx SINE Alu -34 278 1 24 0 0 0 chr5 170956644 170956668 -28673482 + AT_rich Low_complexity Low_complexity 1 24 0 266 328 101 66 chr5 170957546 170957954 -28672196 + L2 LINE L2 2892 3313 0 943 217 174 158 chr5 170958015 170958509 -28671641 - MLT1E2 LTR MaLR -3 623 1 203 262 98 0 chr5 170959766 170959827 -28670323 - L2 LINE L2 -12 3301 3235 278 349 54 0 chr5 170959931 170960080 -28670070 + L3b LINE CR1 1241 1397 -186 401 353 69 39 chr5 170960145 170960553 -28669597 + L2 LINE L2 2400 2819 -495 249 284 75 60 chr5 170960617 170960751 -28669399 + L2 LINE L2 2917 3052 -220 576 287 83 9 chr5 170960841 170961057 -28669093 - MIR SINE MIR 0 262 31 239 315 38 49 chr5 170961140 170961324 -28668826 - MLT1L LTR MaLR -224 391 210 384 292 66 15 chr5 170961656 170961793 -28668357 + MIR SINE MIR 94 237 -25 982 241 153 10 chr5 170962098 170962393 -28667757 - MER58B DNA MER1_type 0 341 5 480 295 154 9 chr5 170963615 170963842 -28666308 - MIR SINE MIR 0 262 3 582 216 142 19 chr5 170963869 170964031 -28666119 - MER5A DNA MER1_type 0 189 8 668 200 177 0 chr5 170965564 170965739 -28664411 - MLT1G1 LTR MaLR -6 584 379 1799 231 66 23 chr5 170965739 170966253 -28663897 + MER74A LTR ERVL 1 536 -22 2068 134 3 16 chr5 170966267 170966574 -28663576 - AluSx SINE Alu -9 303 1 1548 231 63 6 chr5 170966609 170966973 -28663177 - MLT1G1 LTR MaLR -207 388 4 518 289 75 0 chr5 170967145 170967318 -28662832 + MIR SINE MIR 77 262 0 194 351 0 39 chr5 170967488 170967565 -28662585 + MIR SINE MIR 40 113 -149 262 290 160 0 chr5 170967850 170967950 -28662200 - MIR SINE MIR -142 120 5 274 287 62 33 chr5 170968231 170968475 -28661675 + L1ME2 LINE L1 1869 2119 -4277 764 256 129 25 chr5 170968480 170968914 -28661236 + L1ME2 LINE L1 5744 6222 -11 227 48 0 71 chr5 170968916 170968958 -28661192 + (A)n Simple_repeat Simple_repeat 1 39 0 1133 139 5 45 chr5 170969041 170969264 -28660886 - L1PA15 LINE L1 -2 6163 5950 2195 134 0 3 chr5 170969425 170969738 -28660412 + AluSx SINE Alu 1 312 0 627 130 0 0 chr5 170969785 170969885 -28660265 + (TAGA)n Simple_repeat Simple_repeat 3 102 0 367 269 76 0 chr5 170970074 170970193 -28659957 - MIR SINE MIR -15 247 120 493 252 0 59 chr5 170972406 170972525 -28657625 - L2 LINE L2 -1 3312 3201 1119 301 121 42 chr5 170972785 170973387 -28656763 - MER115 DNA AcHobo 0 693 44 246 194 32 32 chr5 170973652 170973714 -28656436 - MER5A DNA MER1_type 0 189 128 640 186 25 0 chr5 170973754 170973872 -28656278 - MER5A DNA MER1_type -68 121 1 200 307 53 40 chr5 170974825 170974900 -28655250 - MER5A DNA MER1_type -110 79 4 1979 177 8 25 chr5 170974979 170975375 -28654775 + MLT1B LTR MaLR 2 390 0 370 344 50 12 chr5 170975594 170975754 -28654396 - MER5A DNA MER1_type -14 175 10 208 354 110 0 chr5 170975876 170975958 -28654192 + L2 LINE L2 2720 2810 -504 454 310 39 44 chr5 170976086 170976289 -28653861 + L2 LINE L2 3111 3312 -1 372 351 101 13 chr5 170977326 170977554 -28652596 - MIR SINE MIR -14 248 1 180 288 61 30 chr5 170977730 170977796 -28652354 + L2 LINE L2 2864 2931 -341 2352 64 0 0 chr5 170978354 170978679 -28651471 - AluY SINE Alu 0 325 1 533 295 72 38 chr5 170978837 170979074 -28651076 + MIR SINE MIR 18 262 0 894 238 13 50 chr5 170980822 170981015 -28649135 + LTR37B LTR ERV1 176 356 -112 1577 229 43 43 chr5 170981015 170981298 -28648852 - MLT1C LTR MaLR 0 467 182 1673 215 0 0 chr5 170981298 170981605 -28648545 - AluJo SINE Alu -5 307 1 1577 229 43 43 chr5 170981605 170981788 -28648362 - MLT1C LTR MaLR -284 183 1 894 238 13 50 chr5 170981788 170981897 -28648253 + LTR37B LTR ERV1 356 467 -1 582 336 0 59 chr5 170983568 170983806 -28646344 - MIR SINE MIR -37 225 2 345 227 0 23 chr5 170984162 170984250 -28645900 - MER46C DNA MER2_type -8 330 245 1729 149 7 3 chr5 170984379 170984667 -28645483 - AluSg1 SINE Alu -20 289 1 2276 89 21 0 chr5 170985544 170985835 -28644315 - AluY SINE Alu -14 297 1 210 116 47 0 chr5 170985870 170985913 -28644237 + (TA)n Simple_repeat Simple_repeat 1 45 0 2293 100 3 0 chr5 170985954 170986254 -28643896 - AluSx SINE Alu -11 301 1 575 323 72 45 chr5 170986279 170986654 -28643496 - L1ME LINE L1 -463 5658 5274 2794 253 92 50 chr5 170987231 170988604 -28641546 - L1MD3 LINE L1 -1 8041 6614 228 35 0 0 chr5 170988719 170988748 -28641402 + (CA)n Simple_repeat Simple_repeat 2 30 0 198 141 31 16 chr5 170988784 170988848 -28641302 + (TA)n Simple_repeat Simple_repeat 2 66 0 2671 252 92 49 chr5 170988990 170990119 -28640031 - L1MC4a LINE L1 -1291 6517 5340 310 273 43 74 chr5 170990182 170990413 -28639737 - L1MC4a LINE L1 -914 5232 5009 * 318 267 67 28 chr5 170990399 170990579 -28639571 - L1MC4a LINE L1 -1653 4493 4307 1777 165 14 0 chr5 170990807 170991144 -28639006 + AluJo SINE Alu 1 341 0 189 337 79 44 chr5 170992726 170992978 -28637172 + L2 LINE L2 2715 2975 -339 308 277 63 78 chr5 170993344 170993550 -28636600 - L1MD3 LINE L1 -1980 5828 5626 267 239 98 22 chr5 170993678 170993770 -28636380 - MIR SINE MIR -35 227 129 241 314 0 0 chr5 170994187 170994257 -28635893 - L2 LINE L2 -2 3311 3242 954 199 0 0 chr5 170994299 170994460 -28635690 + AluJb SINE Alu 133 293 -19 1649 141 68 20 chr5 170994795 170995149 -28635001 - L1MB8 LINE L1 -5 6173 5803 21 36 0 0 chr5 170995634 170995662 -28634488 + AT_rich Low_complexity Low_complexity 1 28 0 584 304 39 46 chr5 170995918 170996178 -28633972 + MIR SINE MIR 3 260 -2 184 290 97 0 chr5 170996329 170996391 -28633759 + L2 LINE L2 3190 3257 -56 2095 100 45 3 chr5 170997617 170997906 -28632244 + AluSx SINE Alu 1 301 -11 364 344 116 28 chr5 170997969 170998356 -28631794 - MLT1J2 LTR MaLR -28 422 2 825 241 68 10 chr5 170999743 170999950 -28630200 - MER58A DNA MER1_type 0 224 6 26 30 0 0 chr5 171000696 171000729 -28629421 + AT_rich Low_complexity Low_complexity 1 33 0 540 234 73 147 chr5 171000764 171001050 -28629100 - MLT1A1 LTR MaLR -100 265 1 573 276 26 60 chr5 171001267 171001535 -28628615 + MIR SINE MIR 3 261 -1 260 326 126 0 chr5 171002341 171002436 -28627714 - L2 LINE L2 0 3272 3166 1719 190 118 19 chr5 171003130 171003545 -28626605 + MLT1C LTR MaLR 8 463 -4 917 212 56 0 chr5 171004047 171004226 -28625924 - MER5A DNA MER1_type 0 189 1 459 320 162 5 chr5 171004584 171004806 -28625344 - MIR SINE MIR 0 262 6 225 319 14 43 chr5 171004892 171005033 -28625117 - L1ME4a LINE L1 -47 6074 5938 294 313 22 0 chr5 171005081 171005215 -28624935 - L1ME4a LINE L1 -244 5877 5741 2286 83 37 0 chr5 171005366 171005666 -28624484 + AluY SINE Alu 1 311 0 1684 182 0 24 chr5 171005722 171006019 -28624131 + AluJo SINE Alu 6 295 -17 1664 177 0 0 chr5 171006174 171006457 -28623693 - L1PB4 LINE L1 -7 6149 5867 303 333 35 0 chr5 171006517 171006604 -28623546 - MIR3 SINE MIR -26 182 93 439 175 9 53 chr5 171006642 171006756 -28623394 - L2 LINE L2 -2 3311 3203 406 296 0 28 chr5 171007526 171007634 -28622516 + MER81 DNA DNA 5 109 -5 444 290 161 0 chr5 171007663 171007787 -28622363 + L2 LINE L2 3126 3269 -3 217 282 128 0 chr5 171007789 171007867 -28622283 + MIR SINE MIR 164 251 -11 1622 186 10 22 chr5 171008256 171008568 -28621582 + AluJo SINE Alu 1 308 -4 209 345 115 14 chr5 171008934 171009073 -28621077 - MIR SINE MIR -52 210 58 920 213 36 36 chr5 171009073 171009294 -28620856 - LTR39 LTR ERV1 0 783 563 * 1983 178 16 60 chr5 171009293 171009726 -28620424 - LTR39 LTR ERV1 -365 418 5 350 320 32 24 chr5 171009793 171009918 -28620232 - L2 LINE L2 -2 3270 3145 255 275 47 21 chr5 171010171 171010291 -28619859 - L2 LINE L2 -285 2987 2867 2014 195 40 16 chr5 171011095 171011520 -28618630 + L1MD3 LINE L1 7550 7984 -11 229 299 143 32 chr5 171011825 171011979 -28618171 + L2 LINE L2 2769 2939 -375 221 319 42 0 chr5 171012422 171012494 -28617656 + L2 LINE L2 3234 3308 -5 735 207 59 12 chr5 171013193 171013362 -28616788 + MER69A DNA AcHobo 1 177 0 217 208 94 0 chr5 171014494 171014547 -28615603 - L2 LINE L2 -2 3311 3254 220 344 22 66 chr5 171014800 171014983 -28615167 - L2 LINE L2 -242 3030 2856 411 248 32 24 chr5 171015208 171015333 -28614817 - MIR SINE MIR -120 142 17 3644 129 58 71 chr5 171015339 171016075 -28614075 - LTR8A LTR ERV1 0 727 1 209 345 73 41 chr5 171017009 171017229 -28612921 - L2 LINE L2 -188 3084 2858 249 208 208 40 chr5 171017653 171017802 -28612348 - L1ME4a LINE L1 -12 6109 5936 1196 217 89 52 chr5 171017826 171018208 -28611942 - MSTD LTR MaLR 0 396 1 1313 218 8 80 chr5 171018467 171018853 -28611297 - MLT1A2 LTR MaLR -16 358 1 23 0 0 0 chr5 171018912 171018935 -28611215 + AT_rich Low_complexity Low_complexity 1 23 0 8543 160 14 12 chr5 171019289 171020746 -28609404 + Tigger1 DNA MER2_type 1 1460 -958 7709 38 1 0 chr5 171020755 171022461 -28607689 - L1PA4 LINE L1 -1 6154 4447 473 60 15 0 chr5 171022461 171022528 -28607622 + L1P LINE L1 1988 2055 -4091 6056 136 17 4 chr5 171022528 171023483 -28606667 + Tigger1 DNA MER2_type 1451 2417 -1 2059 205 114 0 chr5 171023527 171023976 -28606174 - MLT1D LTR MaLR -5 500 1 1911 127 60 27 chr5 171024867 171025199 -28604951 - MER61A LTR ERV1 0 343 1 2213 269 61 26 chr5 171025580 171026187 -28603963 - MER45C DNA AcHobo 0 953 326 1330 263 53 6 chr5 171026245 171026565 -28603585 - MER45C DNA AcHobo -617 336 2 1695 197 37 6 chr5 171026656 171027007 -28603143 - MLT1A1 LTR MaLR -3 362 1 219 304 0 0 chr5 171027020 171027076 -28603074 - L2 LINE L2 -992 2322 2267 2594 49 0 0 chr5 171027206 171027514 -28602636 - AluY SINE Alu -3 308 1 207 162 0 0 chr5 171028122 171028159 -28601991 + T-rich Low_complexity Low_complexity 1 37 0 212 244 0 0 chr5 171028625 171028670 -28601480 + L2 LINE L2 3215 3259 -13 2820 168 58 81 chr5 171029065 171029757 -28600393 + LTR8 LTR ERV1 16 691 0 302 322 0 0 chr5 171030013 171030103 -28600047 + L1ME4a LINE L1 5793 5882 -239 515 247 32 19 chr5 171030133 171030291 -28599859 + L1ME4a LINE L1 5598 5757 -2051 1497 229 65 82 chr5 171030515 171031309 -28598841 + L1MC5 LINE L1 6741 7521 -440 454 219 189 55 chr5 171031315 171031479 -28598671 - MER5A DNA MER1_type 0 189 4 1081 257 25 27 chr5 171031479 171031884 -28598266 + L1MC5 LINE L1 7512 7915 -46 315 190 233 43 chr5 171031886 171032049 -28598101 + L1ME4a LINE L1 5928 6121 0 374 324 24 29 chr5 171032497 171032667 -28597483 + MIR SINE MIR 6 174 -88 197 316 77 26 chr5 171033151 171033268 -28596882 - L2 LINE L2 -480 2834 2712 22 94 0 0 chr5 171033699 171033763 -28596387 + AT_rich Low_complexity Low_complexity 1 64 0 27135 28 16 1 chr5 171034861 171040896 -28589254 - L1HS LINE L1 0 6155 1 332 22 0 22 chr5 171041029 171041075 -28589075 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 32904 37 0 1 chr5 171041075 171046044 -28584106 - L1PA3 LINE L1 -24 6131 1167 1636 194 0 17 chr5 171046220 171046508 -28583642 + AluJb SINE Alu 16 298 -14 4276 141 36 30 chr5 171047242 171047369 -28582781 - Ricksha DNA DNA -7 3239 3114 1742 140 8 0 chr5 171047369 171047626 -28582524 + AluSg SINE Alu 39 297 -13 4276 141 36 30 chr5 171047626 171048376 -28581774 - Ricksha DNA DNA -132 3114 2356 338 67 0 0 chr5 171048374 171048419 -28581731 - Ricksha DNA DNA -3158 88 44 * 231 232 0 18 chr5 171049197 171049253 -28580897 + T-rich Low_complexity Low_complexity 4 58 0 199 362 0 0 chr5 171050152 171050221 -28579929 + L2 LINE L2 2987 3055 -217 279 125 62 0 chr5 171051096 171051160 -28578990 - L1MD2 LINE L1 0 6359 6292 2094 128 10 0 chr5 171051162 171051451 -28578699 + AluSx SINE Alu 2 293 -19 498 109 0 0 chr5 171051451 171051543 -28578607 + (TA)n Simple_repeat Simple_repeat 1 92 0 227 276 23 0 chr5 171051550 171051637 -28578513 - L1MC4 LINE L1 -1340 6702 6614 * 236 233 27 0 chr5 171051565 171051638 -28578512 + L1MC4 LINE L1 6618 6692 -1350 * 4058 238 33 76 chr5 171051633 171051892 -28578258 - L1MD2 LINE L1 -63 6556 6287 1454 163 165 65 chr5 171051892 171052279 -28577871 - MSTB LTR MaLR 0 426 1 8368 191 26 4 chr5 171052279 171053893 -28576257 - MSTB-int LTR MaLR 0 1651 2 2108 185 11 28 chr5 171053894 171054327 -28575823 - MSTB LTR MaLR 0 426 1 1685 156 20 20 chr5 171054328 171054623 -28575527 - AluJo SINE Alu -17 295 1 4058 238 33 76 chr5 171054623 171054660 -28575490 - L1MD2 LINE L1 -331 6288 6251 1720 186 81 97 chr5 171054660 171055311 -28574839 - LTR48B LTR ERV1 0 644 4 4058 238 33 76 chr5 171055311 171056217 -28573933 - L1MD2 LINE L1 -368 6251 5307 2314 104 16 0 chr5 171056217 171056524 -28573626 - AluSp SINE Alu -1 312 1 4058 238 33 76 chr5 171056524 171056721 -28573429 - L1MD2 LINE L1 -1312 5307 5103 230 0 33 0 chr5 171056721 171056751 -28573399 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4058 238 33 76 chr5 171056751 171057376 -28572774 - L1MD2 LINE L1 -1516 5103 4452 522 169 0 0 chr5 171057376 171057465 -28572685 - 5S rRNA rRNA -31 90 2 4058 238 33 76 chr5 171057465 171058094 -28572056 - L1MD2 LINE L1 -2167 4452 3797 207 0 0 0 chr5 171058094 171058117 -28572033 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4058 238 33 76 chr5 171058117 171058156 -28571994 - L1MD2 LINE L1 -2822 3797 3900 2224 146 69 17 chr5 171058156 171058561 -28571589 + MSTB LTR MaLR 1 426 0 4058 238 33 76 chr5 171058561 171058678 -28571472 - L1MD2 LINE L1 -2718 3901 3780 301 231 15 71 chr5 171058691 171058847 -28571303 + L1MB8 LINE L1 5981 6137 -47 452 264 94 16 chr5 171058858 171059112 -28571038 - L1MD2 LINE L1 -4060 2346 2073 331 311 42 0 chr5 171059116 171059235 -28570915 - L1MD2 LINE L1 -4373 2033 1910 746 243 78 57 chr5 171059256 171059779 -28570371 - LTR38 LTR ERV1 -20 590 1 1505 335 38 35 chr5 171059831 171060286 -28569864 - LTR38-int LTR ERV1 -87 7035 6583 2381 95 0 3 chr5 171060286 171060591 -28569559 + AluSq SINE Alu 1 304 -9 1505 335 38 35 chr5 171060591 171061409 -28568741 - LTR38-int LTR ERV1 -539 6583 5730 988 222 42 0 chr5 171061420 171061600 -28568550 - AluJo SINE Alu 0 309 118 207 69 0 0 chr5 171061600 171061629 -28568521 + (TTA)n Simple_repeat Simple_repeat 2 30 0 988 222 42 0 chr5 171061629 171061664 -28568486 - AluJo SINE Alu -191 118 86 1589 347 46 49 chr5 171061822 171063192 -28566958 - LTR38-int LTR ERV1 -1663 5459 4099 4628 159 51 59 chr5 171063192 171064272 -28565878 - MER11C LTR ERVK 0 1071 1 1589 347 46 49 chr5 171064272 171065534 -28564616 - LTR38-int LTR ERV1 -3023 4099 2835 290 359 19 0 chr5 171065584 171065740 -28564410 - LTR38-int LTR ERV1 -4756 2366 2208 1829 308 50 48 chr5 171065853 171067014 -28563136 - LTR38-int LTR ERV1 -5035 2087 925 2199 107 24 0 chr5 171067650 171067940 -28562210 + AluSc SINE Alu 1 297 -12 771 289 96 46 chr5 171068787 171069202 -28560948 - LTR38-int LTR ERV1 -1348 438 3 708 259 97 49 chr5 171069217 171069649 -28560501 - LTR38 LTR ERV1 -11 545 93 3229 219 44 30 chr5 171069737 171070997 -28559153 - L1MD2 LINE L1 -4483 1923 654 189 121 0 0 chr5 171071523 171071556 -28558594 + (TA)n Simple_repeat Simple_repeat 1 33 0 225 0 0 0 chr5 171071569 171071594 -28558556 + (CA)n Simple_repeat Simple_repeat 2 26 0 1259 283 63 34 chr5 171071726 171072220 -28557930 - L1MD2 LINE L1 -5893 516 9 2046 154 0 0 chr5 171072339 171072644 -28557506 - AluSx SINE Alu -7 305 1 25 0 0 0 chr5 171072712 171072737 -28557413 + AT_rich Low_complexity Low_complexity 1 25 0 385 143 57 0 chr5 171072737 171072807 -28557343 + MLT1E LTR MaLR 520 593 0 1074 198 65 53 chr5 171073814 171074137 -28556013 + MLT1A1 LTR MaLR 13 339 -26 360 0 0 0 chr5 171074832 171074872 -28555278 + (TG)n Simple_repeat Simple_repeat 1 40 0 252 0 0 0 chr5 171074871 171074899 -28555251 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 486 0 0 0 chr5 171076107 171076161 -28553989 + (TG)n Simple_repeat Simple_repeat 1 54 0 216 0 0 0 chr5 171076160 171076184 -28553966 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 208 188 31 0 chr5 171077058 171077122 -28553028 + (CATA)n Simple_repeat Simple_repeat 3 68 0 296 262 155 43 chr5 171078934 171079121 -28551029 + MIR SINE MIR 1 208 -54 1777 57 4 0 chr5 171079142 171079371 -28550779 + L1PA5 LINE L1 5923 6152 -2 2384 101 0 0 chr5 171080045 171080353 -28549797 + AluSg1 SINE Alu 1 308 -1 31 26 0 0 chr5 171082420 171082458 -28547692 + AT_rich Low_complexity Low_complexity 1 38 0 357 265 68 15 chr5 171082571 171082703 -28547447 + MIR SINE MIR 66 204 -58 333 272 0 0 chr5 171083223 171083304 -28546846 + MER63 DNA MER1_type 672 752 -310 290 224 75 0 chr5 171083295 171083362 -28546788 + MER63 DNA MER1_type 965 1036 -26 * 467 285 198 6 chr5 171084322 171084494 -28545656 + MIR SINE MIR 2 206 -56 684 348 32 20 chr5 171085433 171085781 -28544369 - L2 LINE L2 -376 2938 2587 2161 111 0 4 chr5 171085993 171086272 -28543878 - AluSx SINE Alu -13 299 22 262 287 118 45 chr5 171086849 171086992 -28543158 - MIR SINE MIR -59 149 26 410 280 68 0 chr5 171087554 171087672 -28542478 - L2 LINE L2 0 3313 3188 3607 169 39 22 chr5 171087788 171088551 -28541599 + L1MC1 LINE L1 5558 6333 0 239 325 94 31 chr5 171088712 171088872 -28541278 + MIR3 SINE MIR 14 183 -25 26 74 0 0 chr5 171089161 171089215 -28540935 + AT_rich Low_complexity Low_complexity 1 54 0 1578 240 102 58 chr5 171089539 171090544 -28539606 - L1MC5 LINE L1 -30 7931 6883 305 323 89 13 chr5 171090544 171090702 -28539448 - L1MC5 LINE L1 -2384 5424 5255 567 247 141 22 chr5 171090837 171091064 -28539086 + MIR SINE MIR 3 256 -6 194 315 11 45 chr5 171091454 171091543 -28538607 - MIR SINE MIR -64 198 113 567 243 173 5 chr5 171091806 171091991 -28538159 - MIR SINE MIR -36 226 11 386 281 70 9 chr5 171093535 171093649 -28536501 + MIR SINE MIR 31 151 -111 304 390 0 0 chr5 171094679 171094802 -28535348 + L2 LINE L2 3188 3310 -3 189 333 0 13 chr5 171095294 171095372 -28534778 + L3 LINE CR1 1119 1195 -382 526 322 87 17 chr5 171095478 171095708 -28534442 - MIR SINE MIR -14 248 3 186 353 0 78 chr5 171095835 171095951 -28534199 - MIR SINE MIR -81 127 21 354 273 83 23 chr5 171096302 171096434 -28533716 + MIR SINE MIR 2 141 -121 * 1666 293 115 36 chr5 171096415 171097658 -28532492 - L2 LINE L2 0 3313 1986 335 351 23 0 chr5 171097746 171097877 -28532273 + MIR3 SINE MIR 64 197 -11 180 158 0 0 chr5 171098840 171098878 -28531272 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 251 300 0 0 chr5 171098897 171098957 -28531193 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 224 291 39 39 chr5 171099010 171099113 -28531037 - MIR SINE MIR -6 256 154 477 0 0 0 chr5 171100053 171100106 -28530044 + (TTA)n Simple_repeat Simple_repeat 2 54 0 1949 126 3 11 chr5 171100109 171100394 -28529756 - AluSq SINE Alu -30 283 1 606 237 26 79 chr5 171101032 171101222 -28528928 + MER5A DNA MER1_type 10 189 0 226 231 0 46 chr5 171101316 171101381 -28528769 + (TATATG)n Simple_repeat Simple_repeat 1 62 0 21 36 0 0 chr5 171101455 171101483 -28528667 + AT_rich Low_complexity Low_complexity 1 28 0 1377 225 3 45 chr5 171101537 171101848 -28528302 + AluJo SINE Alu 3 300 -2 871 265 28 59 chr5 171101849 171102310 -28527840 + L1ME2 LINE L1 4802 5248 -898 2284 224 94 13 chr5 171102386 171102732 -28527418 + L1ME2 LINE L1 5431 5747 -417 1551 159 81 26 chr5 171102732 171103077 -28527073 + THE1B LTR MaLR 1 364 0 2284 224 94 13 chr5 171103077 171103407 -28526743 + L1ME2 LINE L1 5747 6162 -2 712 293 70 9 chr5 171103434 171103663 -28526487 - MIR SINE MIR -17 245 3 6175 101 34 25 chr5 171103694 171104807 -28525343 - L1PA14 LINE L1 0 6161 5047 2229 121 0 6 chr5 171104927 171105240 -28524910 - AluSq SINE Alu -2 311 1 571 326 36 9 chr5 171105463 171105684 -28524466 + MIR SINE MIR 28 254 -8 239 70 0 23 chr5 171106444 171106487 -28523663 + (TG)n Simple_repeat Simple_repeat 2 43 0 2602 51 0 0 chr5 171106678 171106989 -28523161 - AluY SINE Alu 0 311 1 228 290 178 0 chr5 171107239 171107346 -28522804 + MIR3 SINE MIR 37 162 -46 315 268 28 0 chr5 171107675 171107746 -28522404 - MIR SINE MIR -113 149 77 333 0 0 0 chr5 171108136 171108173 -28521977 + (CA)n Simple_repeat Simple_repeat 2 38 0 186 280 20 60 chr5 171108429 171108529 -28521621 + MIR SINE MIR 121 216 -46 1994 63 4 0 chr5 171108807 171109062 -28521088 + L1PA5 LINE L1 5892 6147 -7 325 349 82 7 chr5 171109193 171109339 -28520811 + L2 LINE L2 3116 3272 0 377 215 259 13 chr5 171109604 171109762 -28520388 - MER117 DNA MER1_type 0 197 1 1428 220 7 3 chr5 171110316 171110611 -28519539 - AluJo SINE Alu -4 308 13 181 314 39 0 chr5 171111501 171111552 -28518598 - L2 LINE L2 -95 3177 3125 248 111 0 0 chr5 171111966 171112002 -28518148 + tRNA-Gly-GGC tRNA tRNA 1 36 -38 253 286 42 8 chr5 171112112 171112140 -28518010 - L1MA10 LINE L1 0 6334 6307 2491 233 60 11 chr5 171112140 171112329 -28517821 - L1ME2 LINE L1 -20 6144 5966 2108 114 4 4 chr5 171112329 171112641 -28517509 + AluSx SINE Alu 1 312 0 2491 233 60 11 chr5 171112641 171113559 -28516591 - L1ME2 LINE L1 -198 5966 4977 997 219 21 99 chr5 171113983 171114366 -28515784 + MLT1A1 LTR MaLR 1 353 -12 4758 236 42 39 chr5 171114377 171115774 -28514376 + MLT1A1-int LTR MaLR 1 1401 -334 252 326 29 40 chr5 171115990 171116165 -28513985 + HAL1 LINE L1 1409 1581 -926 2584 121 57 0 chr5 171116165 171116570 -28513580 + MSTA LTR MaLR 1 428 0 8503 178 26 11 chr5 171116570 171117948 -28512202 + MSTA-int LTR MaLR 1 1408 -243 7431 34 20 7 chr5 171117948 171118995 -28511155 - L1PA4 LINE L1 0 6155 5104 8503 178 26 11 chr5 171118995 171119243 -28510907 + MSTA-int LTR MaLR 1408 1651 0 2759 141 12 0 chr5 171119243 171119662 -28510488 + MSTA LTR MaLR 1 424 -4 25 31 0 0 chr5 171119768 171119800 -28510350 + AT_rich Low_complexity Low_complexity 1 32 0 2438 77 0 0 chr5 171120142 171120442 -28509708 + AluY SINE Alu 1 300 -11 240 305 0 24 chr5 171171151 171171233 -28458917 - L2 LINE L2 0 3272 3193 245 323 40 20 chr5 171171357 171171458 -28458692 - MIR SINE MIR -100 108 5 279 54 0 0 chr5 171172081 171172118 -28458032 + (CA)n Simple_repeat Simple_repeat 2 38 0 429 237 44 18 chr5 171172198 171172312 -28457838 + MIR SINE MIR 79 195 -67 191 292 174 35 chr5 171173428 171173572 -28456578 + MIR3 SINE MIR 33 196 -12 276 88 53 0 chr5 171173578 171173635 -28456515 + (TA)n Simple_repeat Simple_repeat 2 61 0 953 325 47 22 chr5 171173672 171174179 -28455971 - L1MC4a LINE L1 -1846 5962 5443 308 288 24 56 chr5 171174951 171175076 -28455074 + MIR3 SINE MIR 82 202 -6 494 82 82 0 chr5 171175192 171175265 -28454885 - MADE1 DNA Mariner -1 79 1 21 36 0 0 chr5 171175423 171175451 -28454699 + AT_rich Low_complexity Low_complexity 1 28 0 14675 213 79 23 chr5 171176391 171178939 -28451211 + L1MA8 LINE L1 3 2407 -4844 2467 40 0 3 chr5 171178939 171179238 -28450912 + AluY SINE Alu 1 298 -13 14675 213 79 23 chr5 171179238 171182610 -28447540 + L1MA8 LINE L1 2407 6087 -1164 1210 146 43 39 chr5 171182610 171182843 -28447307 + MER46A DNA MER2_type 1 234 -2 14675 213 79 23 chr5 171182843 171184074 -28446076 + L1MA8 LINE L1 6087 7248 -3 2098 110 7 0 chr5 171184410 171184720 -28445430 + AluSx SINE Alu 1 312 0 23 0 0 0 chr5 171185324 171185347 -28444803 + AT_rich Low_complexity Low_complexity 1 23 0 192 77 0 0 chr5 171185411 171185437 -28444713 + (TATG)n Simple_repeat Simple_repeat 2 27 0 1898 112 81 7 chr5 171185607 171185892 -28444258 + AluSx SINE Alu 3 308 -4 187 213 16 66 chr5 171186492 171186553 -28443597 + L2 LINE L2 3185 3242 -30 223 271 0 0 chr5 171186965 171187013 -28443137 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 345 229 107 49 chr5 171188528 171188650 -28441500 + L3 LINE CR1 1293 1421 -156 748 169 17 0 chr5 171188738 171188883 -28441267 - MSTD LTR MaLR -19 438 255 486 323 72 6 chr5 171189001 171189168 -28440982 + MIR SINE MIR 15 192 -70 21 36 0 0 chr5 171189242 171189270 -28440880 + AT_rich Low_complexity Low_complexity 1 28 0 261 296 128 8 chr5 171189380 171189505 -28440645 - MIR SINE MIR -47 215 76 610 326 151 17 chr5 171189543 171189893 -28440257 + L3 LINE CR1 1169 1565 -12 21 57 0 0 chr5 171190357 171190392 -28439758 + AT_rich Low_complexity Low_complexity 1 35 0 226 302 47 23 chr5 171192353 171192439 -28437711 + MIR SINE MIR 92 179 -83 22 0 0 0 chr5 171193153 171193175 -28436975 + AT_rich Low_complexity Low_complexity 1 22 0 5705 153 4 27 chr5 171193419 171195034 -28435116 - L1PB1 LINE L1 -2 6865 5287 * 8273 150 40 21 chr5 171195031 171196191 -28433959 - L1PB1 LINE L1 -3039 3823 2686 2897 105 40 5 chr5 171196191 171196569 -28433581 + MLT2A1 LTR ERVL 1 397 -47 672 102 0 0 chr5 171196569 171196667 -28433483 + (TA)n Simple_repeat Simple_repeat 1 98 0 2897 105 40 5 chr5 171196667 171196717 -28433433 + MLT2A1 LTR ERVL 397 444 0 8273 150 40 21 chr5 171196717 171197950 -28432200 - L1PB1 LINE L1 -4176 2686 1387 818 234 5 0 chr5 171197950 171198138 -28432012 - L1PB1 LINE L1 -6669 194 6 240 324 0 56 chr5 171198177 171198248 -28431902 + L2 LINE L2 3206 3272 0 1929 136 4 4 chr5 171198640 171198955 -28431195 + AluSx SINE Alu 3 317 0 351 311 75 44 chr5 171199690 171199918 -28430232 - L3 LINE CR1 -113 1464 1230 813 200 0 0 chr5 171201123 171201268 -28428882 + FRAM SINE Alu 1 145 -31 1804 170 36 0 chr5 171201336 171201734 -28428416 - L1MC/D LINE L1 -744 5402 5186 23 0 0 0 chr5 171201750 171201773 -28428377 + AT_rich Low_complexity Low_complexity 1 23 0 424 310 91 35 chr5 171202009 171202348 -28427802 + MLT1K LTR MaLR 171 588 0 2447 64 3 0 chr5 171203844 171204140 -28426010 - AluY SINE Alu -14 297 1 1876 165 7 3 chr5 171204230 171204527 -28425623 - AluSx SINE Alu -14 298 1 1901 155 7 0 chr5 171204735 171205039 -28425111 + AluSx SINE Alu 1 306 -6 267 333 20 0 chr5 171205040 171205142 -28425008 + MER94 DNA DNA 31 134 0 296 185 222 0 chr5 171205177 171205258 -28424892 - L2 LINE L2 -3 3269 3171 1667 192 17 0 chr5 171205344 171205635 -28424515 - AluJo SINE Alu -16 296 1 252 271 84 9 chr5 171205747 171205854 -28424296 + LTR16A1 LTR ERVL 30 144 -313 539 198 124 0 chr5 171205942 171206063 -28424087 + MER3 DNA MER1_type 73 208 -1 2308 110 0 0 chr5 171206510 171206818 -28423332 + AluSx SINE Alu 1 308 -4 228 241 145 12 chr5 171207099 171207182 -28422968 + MIR SINE MIR 70 163 -99 347 299 79 12 chr5 171207355 171207519 -28422631 - MER102a DNA MER1_type 0 330 156 22 0 0 0 chr5 171207866 171207888 -28422262 + AT_rich Low_complexity Low_complexity 1 22 0 984 209 19 129 chr5 171207926 171208289 -28421861 + MER5C DNA MER1_type 2 324 0 396 59 0 0 chr5 171208648 171208699 -28421451 + (TG)n Simple_repeat Simple_repeat 1 51 0 249 257 14 54 chr5 171209118 171209192 -28420958 - L2 LINE L2 -1 3271 3201 2492 223 72 14 chr5 171209436 171210087 -28420063 + L1MD2 LINE L1 5671 6359 0 1502 276 57 26 chr5 171210797 171211326 -28418824 + L1MC4a LINE L1 6452 6996 -812 1207 217 148 80 chr5 171211344 171211920 -28418230 + L1MC4 LINE L1 7248 7862 -180 421 183 117 29 chr5 171212242 171212379 -28417771 - L1MC5 LINE L1 -99 7862 7714 588 251 53 15 chr5 171212654 171212868 -28417282 + L1MC5 LINE L1 7022 7242 -738 559 242 95 19 chr5 171213016 171213227 -28416923 + L1MC5 LINE L1 7304 7530 -431 356 335 88 42 chr5 171214800 171215039 -28415111 - L2 LINE L2 -606 2708 2459 203 264 42 14 chr5 171215205 171215277 -28414873 - L2 LINE L2 0 3313 3240 808 336 151 31 chr5 171215562 171215639 -28414511 - L2 LINE L2 -338 2976 2910 2218 104 3 0 chr5 171215639 171215936 -28414214 + AluSc SINE Alu 1 298 -11 808 336 151 31 chr5 171215936 171216838 -28413312 - L2 LINE L2 -404 2910 1879 311 316 90 47 chr5 171216966 171217178 -28412972 + MIR SINE MIR 28 248 -14 239 267 147 43 chr5 171217849 171217965 -28412185 + MIR3 SINE MIR 3 130 -78 2151 96 0 3 chr5 171218922 171219213 -28410937 - AluSc SINE Alu -19 290 1 2159 93 3 35 chr5 171219463 171219775 -28410375 - AluSp SINE Alu -10 303 2 25 0 0 0 chr5 171221206 171221231 -28408919 + AT_rich Low_complexity Low_complexity 1 25 0 437 261 117 98 chr5 171221363 171221638 -28408512 - L1M4 LINE L1 -1854 4292 4024 1118 49 7 0 chr5 171221638 171221780 -28408370 - L1PA4 LINE L1 -13 6142 6000 437 261 117 98 chr5 171221780 171221967 -28408183 - L1M4 LINE L1 -2122 4024 3842 1650 189 7 0 chr5 171221967 171222247 -28407903 + AluJo SINE Alu 1 282 -30 437 261 117 98 chr5 171222247 171222306 -28407844 - L1M4 LINE L1 -2304 3842 3786 1822 157 74 3 chr5 171222306 171222643 -28407507 + MER46B DNA MER2_type 1 236 0 437 261 117 98 chr5 171222643 171223351 -28406799 - L1M4 LINE L1 -2360 3786 3038 185 308 0 0 chr5 171223466 171223518 -28406632 - L2 LINE L2 0 3313 3262 1258 271 86 16 chr5 171223618 171224128 -28406022 - L1ME2 LINE L1 -25 6139 5594 4019 221 129 27 chr5 171224134 171224297 -28405853 + Charlie1a DNA MER1_type 5 150 -2611 1521 178 19 8 chr5 171224297 171224555 -28405595 + AluJo SINE Alu 1 261 -51 243 0 0 0 chr5 171224565 171224592 -28405558 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2369 53 0 0 chr5 171224593 171224894 -28405256 + AluY SINE Alu 1 301 0 4019 221 129 27 chr5 171224894 171224982 -28405168 + Charlie1a DNA MER1_type 158 236 -2525 2069 117 0 0 chr5 171224982 171225287 -28404863 + AluSx SINE Alu 1 305 0 4019 221 129 27 chr5 171225287 171226321 -28403829 + Charlie1a DNA MER1_type 236 1439 -16 897 250 106 5 chr5 171226412 171226515 -28403635 - L1ME2 LINE L1 -568 5596 5505 459 0 0 0 chr5 171226515 171226566 -28403584 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 897 250 106 5 chr5 171226566 171227055 -28403095 - L1ME2 LINE L1 -659 5505 4943 945 215 72 59 chr5 171227061 171227438 -28402712 + MSTC LTR MaLR 1 428 0 2362 250 107 12 chr5 171227485 171228589 -28401561 - L1ME2 LINE L1 -1314 4832 3624 6172 142 68 19 chr5 171228770 171229901 -28400249 + Tigger3b DNA MER2_type 1 1186 -45 5800 130 21 38 chr5 171229951 171230310 -28399840 - L1PB1 LINE L1 0 6151 5787 234 0 0 0 chr5 171230310 171230336 -28399814 + (TG)n Simple_repeat Simple_repeat 2 27 0 5800 130 21 38 chr5 171230336 171231375 -28398775 - L1PB1 LINE L1 -364 5787 4782 253 214 71 0 chr5 171231571 171231641 -28398509 + L1MEd LINE L1 1160 1234 -4885 480 210 65 32 chr5 171232181 171232305 -28397845 + L2 LINE L2 3186 3313 0 42 48 0 0 chr5 171233020 171233083 -28397067 + AT_rich Low_complexity Low_complexity 1 63 0 22 35 0 0 chr5 171233554 171233583 -28396567 + AT_rich Low_complexity Low_complexity 1 29 0 1499 173 25 7 chr5 171233909 171234186 -28395964 - AluJo SINE Alu -26 286 5 401 236 105 11 chr5 171234444 171234627 -28395523 + MIR SINE MIR 49 256 -6 5505 94 21 26 chr5 171235253 171235979 -28394171 - L1PA14 LINE L1 -1 6160 5432 339 25 0 0 chr5 171235979 171236019 -28394131 + (TTCC)n Simple_repeat Simple_repeat 4 43 0 2099 122 0 3 chr5 171236020 171236306 -28393844 - AluSp SINE Alu -26 287 3 5505 94 21 26 chr5 171236306 171236397 -28393753 - L1PA14 LINE L1 -729 5432 5342 2407 99 0 73 chr5 171236397 171236602 -28393548 - THE1A LTR MaLR 0 355 189 2324 84 7 10 chr5 171236602 171236912 -28393238 + AluY SINE Alu 3 311 0 2407 99 0 73 chr5 171236912 171237089 -28393061 - THE1A LTR MaLR -166 189 1 5505 94 21 26 chr5 171237089 171237801 -28392349 - L1PA14 LINE L1 -819 5342 4631 248 314 97 32 chr5 171237904 171238028 -28392122 - MIR3 SINE MIR -24 184 53 380 328 62 16 chr5 171238068 171238260 -28391890 + MIR SINE MIR 29 229 -33 21 0 0 0 chr5 171238898 171238919 -28391231 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr5 171239035 171239059 -28391091 + (TG)n Simple_repeat Simple_repeat 1 24 0 25 0 0 0 chr5 171239406 171239431 -28390719 + AT_rich Low_complexity Low_complexity 1 25 0 3276 108 4 20 chr5 171239431 171239932 -28390218 - L1PB2 LINE L1 -2 6149 5657 920 154 5 109 chr5 171240192 171240412 -28389738 + MER58A DNA MER1_type 27 223 -1 23 54 0 0 chr5 171241632 171241669 -28388481 + AT_rich Low_complexity Low_complexity 1 37 0 313 290 274 12 chr5 171242285 171242533 -28387617 - MER102b DNA MER1_type -1 340 28 334 200 75 0 chr5 171242778 171242858 -28387292 + Charlie7 DNA MER1_type 2480 2565 -47 346 323 57 6 chr5 171243303 171243461 -28386689 - MIR SINE MIR -5 257 92 21 36 0 0 chr5 171243738 171243766 -28386384 + AT_rich Low_complexity Low_complexity 1 28 0 220 281 0 0 chr5 171244042 171244099 -28386051 - L2 LINE L2 -1 3312 3256 21 36 0 0 chr5 171244175 171244203 -28385947 + AT_rich Low_complexity Low_complexity 1 28 0 303 302 24 0 chr5 171244244 171244370 -28385780 - L1ME LINE L1 -317 5804 5676 208 298 36 24 chr5 171244436 171244520 -28385630 + L3 LINE CR1 1491 1575 -2 575 357 141 22 chr5 171245267 171245960 -28384190 - L2 LINE L2 -56 3257 2494 1122 191 59 0 chr5 171246331 171246535 -28383615 + MER20 DNA MER1_type 1 216 -3 225 257 26 44 chr5 171246902 171247015 -28383135 + L1P LINE L1 5305 5415 -751 264 77 0 0 chr5 171247385 171247424 -28382726 + (CA)n Simple_repeat Simple_repeat 2 40 0 444 286 32 86 chr5 171248915 171249135 -28381015 - L2 LINE L2 0 3313 3106 373 183 19 67 chr5 171249157 171249261 -28380889 - MLT1K LTR MaLR -94 494 396 710 82 0 0 chr5 171249358 171249455 -28380695 + AluY SINE Alu 197 293 -18 296 99 33 0 chr5 171250159 171250210 -28379940 + MADE1 DNA Mariner 1 46 -34 22 70 0 0 chr5 171250262 171250305 -28379845 + AT_rich Low_complexity Low_complexity 1 43 0 704 222 99 0 chr5 171251065 171251236 -28378914 - MER5A DNA MER1_type -1 188 1 16203 38 1 0 chr5 171251511 171254247 -28375903 + L1PA4 LINE L1 3415 6153 -2 383 247 151 24 chr5 171254347 171254513 -28375637 - L2 LINE L2 -1 3312 3126 337 344 46 26 chr5 171254585 171254736 -28375414 - MER5A DNA MER1_type -1 188 35 225 329 79 40 chr5 171254607 171254759 -28375391 + MER5A DNA MER1_type 32 189 0 * 372 43 0 0 chr5 171255041 171255087 -28375063 + (TG)n Simple_repeat Simple_repeat 1 46 0 852 219 0 0 chr5 171255165 171255320 -28374830 + FRAM SINE Alu 1 155 -21 265 250 67 29 chr5 171256544 171256648 -28373502 - MER103 DNA DNA -14 152 45 1672 88 28 4 chr5 171256712 171256961 -28373189 - L1PA10 LINE L1 -3 6165 5911 196 27 54 27 chr5 171256989 171257026 -28373124 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 596 212 0 30 chr5 171257096 171257228 -28372922 - FLAM_A SINE Alu -14 128 1 183 326 0 0 chr5 171257237 171257283 -28372867 - L2 LINE L2 -8 3264 3219 715 255 108 0 chr5 171257515 171257727 -28372423 - MIR SINE MIR -21 241 7 516 325 35 10 chr5 171257839 171258042 -28372108 + MIR SINE MIR 48 255 -7 333 164 45 0 chr5 171258282 171258349 -28371801 - MER58A DNA MER1_type -10 214 145 344 257 14 0 chr5 171258354 171258428 -28371722 + MER2 DNA MER2_type 2 76 -269 479 233 12 129 chr5 171258479 171258534 -28371616 - MER58A DNA MER1_type -193 148 88 1570 141 4 4 chr5 171258534 171258811 -28371339 + L1MA4A LINE L1 6025 6301 -2 479 233 12 129 chr5 171258811 171258918 -28371232 - MER58A DNA MER1_type -253 88 5 256 154 0 0 chr5 171258992 171259044 -28371106 - L1MB4 LINE L1 -3 6177 6126 2353 116 84 2 chr5 171259153 171259559 -28370591 - L1MA8 LINE L1 -4 6287 5849 3952 183 43 12 chr5 171259559 171260467 -28369683 - L1MB3 LINE L1 -46 6137 5201 810 210 0 25 chr5 171260467 171260629 -28369521 - FAM SINE Alu -7 42 1 7369 225 28 36 chr5 171260650 171261726 -28368424 - L1MB3 LINE L1 -933 5213 4164 676 197 15 15 chr5 171261726 171261858 -28368292 + FLAM_C SINE Alu 2 133 0 7369 225 28 36 chr5 171261858 171262943 -28367207 - L1MB3 LINE L1 -1982 4164 3071 3886 214 21 89 chr5 171262955 171263919 -28366231 + MER54A LTR ERVL 4 901 0 1071 259 159 1 chr5 171263924 171264402 -28365748 - L1MB3 LINE L1 -3085 3061 2478 283 236 0 45 chr5 171264402 171264491 -28365659 + (CATATA)n Simple_repeat Simple_repeat 4 88 0 1046 116 5 30 chr5 171264509 171264707 -28365443 - L1MA3 LINE L1 0 7724 7532 4837 22 2 12 chr5 171264708 171265343 -28364807 + L1PA2 LINE L1 5554 6182 0 4331 137 36 15 chr5 171265343 171266086 -28364064 - L1MA3 LINE L1 -195 7529 6771 729 132 0 107 chr5 171266087 171266246 -28363904 - FLAM_C SINE Alu -1 142 1 7020 183 16 3 chr5 171266262 171267704 -28362446 - L1MA3 LINE L1 -792 6773 5314 18233 171 44 11 chr5 171267755 171271760 -28358390 - L1MA3 LINE L1 -3114 4451 326 2158 130 48 20 chr5 171271760 171272114 -28358036 + THE1B LTR MaLR 1 364 0 8885 172 86 4 chr5 171272115 171273574 -28356576 + THE1B-int LTR MaLR 2 1580 0 * 2129 136 48 20 chr5 171273575 171273928 -28356222 + THE1B LTR MaLR 2 364 0 1516 220 25 6 chr5 171273928 171274242 -28355908 - L1MA3 LINE L1 -7232 333 14 9831 167 42 100 chr5 171274249 171274441 -28355709 - L1M4 LINE L1 -3660 2722 2520 1734 178 20 20 chr5 171274441 171274745 -28355405 - AluJb SINE Alu -7 305 2 9831 167 42 100 chr5 171274745 171275504 -28354646 - L1M4 LINE L1 -3862 2520 1719 1629 153 50 68 chr5 171275504 171275706 -28354444 - THE1C LTR MaLR 0 375 182 2408 77 0 0 chr5 171275706 171276003 -28354147 - AluY SINE Alu -14 297 1 1629 153 50 68 chr5 171276003 171276180 -28353970 - THE1C LTR MaLR -193 182 3 9831 167 42 100 chr5 171276180 171277010 -28353140 - L1M4 LINE L1 -4663 1719 842 515 96 0 0 chr5 171277010 171277083 -28353067 - Alu SINE Alu -13 297 225 878 93 0 0 chr5 171277083 171277190 -28352960 - AluSg SINE Alu -199 111 5 9831 167 42 100 chr5 171277190 171278113 -28352037 - L1M4 LINE L1 -5538 844 5 280 350 102 60 chr5 171278137 171278471 -28351679 - L2 LINE L2 -25 3247 2900 362 250 218 51 chr5 171279202 171279358 -28350792 - MER63A DNA MER1_type -1 209 28 267 326 137 23 chr5 171279510 171279685 -28350465 - MIR SINE MIR -12 250 56 888 266 31 35 chr5 171279970 171280226 -28349924 + MIR SINE MIR 2 256 -6 208 271 62 0 chr5 171280861 171280909 -28349241 + MIR SINE MIR 211 261 -1 428 329 30 12 chr5 171281921 171282088 -28348062 - L2 LINE L2 -1 3271 3102 5080 175 32 17 chr5 171282305 171283372 -28346778 - L1MA9 LINE L1 0 6312 5232 3555 199 28 9 chr5 171283371 171284150 -28346000 + L1 LINE L1 4130 4923 -1223 * 189 324 69 69 chr5 171284646 171284791 -28345359 - MIR SINE MIR -19 243 99 218 296 74 37 chr5 171285800 171285881 -28344269 + L2 LINE L2 3181 3264 -49 2157 116 0 13 chr5 171286099 171286401 -28343749 - AluSx SINE Alu -14 298 1 343 400 0 0 chr5 171287184 171287314 -28342836 + MIR3 SINE MIR 33 162 -46 275 160 60 0 chr5 171287451 171287501 -28342649 - L2 LINE L2 -16 3297 3245 333 0 0 0 chr5 171287603 171287640 -28342510 + (TG)n Simple_repeat Simple_repeat 2 38 0 221 57 29 0 chr5 171288608 171288643 -28341507 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 2258 75 0 4 chr5 171288643 171288921 -28341229 + AluY SINE Alu 1 277 -34 345 47 0 0 chr5 171288926 171288969 -28341181 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 339 313 107 49 chr5 171289231 171289474 -28340676 + MLT1K LTR MaLR 324 580 -8 352 289 53 53 chr5 171289860 171290047 -28340103 - L2 LINE L2 0 3313 3127 211 323 168 0 chr5 171290381 171290542 -28339608 - L2 LINE L2 -443 2871 2684 541 237 65 53 chr5 171290548 171290717 -28339433 - MER5B DNA MER1_type -7 171 1 503 321 61 53 chr5 171290763 171291124 -28339026 + L3 LINE CR1 911 1274 -303 412 283 58 8 chr5 171291120 171291240 -28338910 - L2 LINE L2 -2 3311 3186 * 318 282 12 0 chr5 171291557 171291642 -28338508 - MIR SINE MIR -18 244 159 1106 175 75 100 chr5 171291654 171292055 -28338095 - LTR37B LTR ERV1 0 468 78 702 251 50 0 chr5 171293148 171293327 -28336823 - MIR SINE MIR -38 224 37 517 265 45 65 chr5 171293360 171293560 -28336590 + MIR3 SINE MIR 12 207 -1 22 35 0 0 chr5 171297450 171297479 -28332671 + AT_rich Low_complexity Low_complexity 1 29 0 2497 69 0 0 chr5 171297484 171297789 -28332361 + AluY SINE Alu 1 305 -6 959 155 6 0 chr5 171297828 171297989 -28332161 + MER46A DNA MER2_type 4 165 -71 560 245 75 19 chr5 171298532 171298691 -28331459 + MIR SINE MIR 77 244 -18 486 208 188 0 chr5 171300165 171300319 -28329831 - MER105 DNA DNA -14 190 8 561 301 10 0 chr5 171300433 171300629 -28329521 + L1ME3 LINE L1 5958 6155 -7 507 296 107 21 chr5 171301189 171301422 -28328728 + MIR SINE MIR 7 259 -3 333 0 0 0 chr5 171301453 171301490 -28328660 + (T)n Simple_repeat Simple_repeat 1 37 0 358 312 11 91 chr5 171301564 171301750 -28328400 + MIR3 SINE MIR 16 186 -22 216 111 0 0 chr5 171302274 171302310 -28327840 + (T)n Simple_repeat Simple_repeat 1 36 0 303 239 37 80 chr5 171302320 171302483 -28327667 + L2 LINE L2 3116 3271 -42 316 323 23 31 chr5 171302640 171302770 -28327380 + MIR SINE MIR 46 174 -88 861 268 62 85 chr5 171303100 171304071 -28326079 + L2 LINE L2 2195 3141 -172 312 281 208 73 chr5 171305185 171305527 -28324623 + L2 LINE L2 2926 3313 0 210 163 0 61 chr5 171307159 171307208 -28322942 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 683 163 78 0 chr5 171307247 171307400 -28322750 - Tigger1 DNA MER2_type -44 2374 2210 2350 260 136 16 chr5 171307409 171308428 -28321722 - MER69B DNA AcHobo -58 1168 27 254 323 54 21 chr5 171308784 171308877 -28321273 + MIR SINE MIR 41 136 -72 221 56 0 28 chr5 171308989 171309025 -28321125 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 541 287 11 50 chr5 171309255 171309374 -28320776 - MER5B DNA MER1_type 0 178 67 2215 111 3 7 chr5 171309374 171309681 -28320469 - AluSq SINE Alu -7 306 1 541 287 11 50 chr5 171309681 171309742 -28320408 - MER5B DNA MER1_type -111 67 5 250 284 87 47 chr5 171310550 171310677 -28319473 - L2 LINE L2 0 3272 3141 181 214 48 0 chr5 171310646 171310688 -28319462 + L3b LINE CR1 1347 1390 -193 * 26 0 0 0 chr5 171311188 171311214 -28318936 + AT_rich Low_complexity Low_complexity 1 26 0 702 190 9 0 chr5 171313191 171313362 -28316788 + FLAM_C SINE Alu 1 172 0 1436 241 0 3 chr5 171313964 171314246 -28315904 - AluJo SINE Alu -31 281 1 2481 84 0 0 chr5 171314432 171314743 -28315407 - AluY SINE Alu 0 311 1 4982 172 25 10 chr5 171315875 171317893 -28312257 + L1PB3 LINE L1 4114 6154 0 201 182 0 0 chr5 171317894 171317927 -28312223 + (TA)n Simple_repeat Simple_repeat 2 34 0 396 299 166 6 chr5 171318419 171318604 -28311546 - MIR SINE MIR -6 256 44 292 207 61 24 chr5 171318897 171318979 -28311171 + MIR SINE MIR 153 237 -25 827 272 99 9 chr5 171319020 171319252 -28310898 + MIR SINE MIR 6 258 -4 414 0 0 0 chr5 171319260 171319306 -28310844 + (CAT)n Simple_repeat Simple_repeat 3 48 0 490 282 119 31 chr5 171319306 171319533 -28310617 - MIR SINE MIR -15 247 1 220 328 0 0 chr5 171319935 171319993 -28310157 - MIR3 SINE MIR -32 176 119 723 280 5 0 chr5 171320379 171320568 -28309582 - MIR SINE MIR -71 191 2 223 214 0 0 chr5 171320854 171320896 -28309254 + L2 LINE L2 3230 3271 -1 403 238 50 0 chr5 171322691 171322792 -28307358 - MER3 DNA MER1_type -89 120 15 226 302 16 0 chr5 171323221 171323284 -28306866 + MIR3 SINE MIR 111 174 -34 1731 151 0 0 chr5 171323299 171323557 -28306593 - AluSx SINE Alu -15 297 40 1757 251 61 26 chr5 171323776 171324314 -28305836 - MLT1G1 LTR MaLR 0 595 39 779 224 158 59 chr5 171324314 171324739 -28305411 + MLT1D LTR MaLR 1 467 0 522 323 76 9 chr5 171324820 171325043 -28305107 - MIR SINE MIR -7 255 18 467 318 8 8 chr5 171326169 171326295 -28303855 - L2 LINE L2 -5 3267 3142 724 304 47 5 chr5 171327016 171327230 -28302920 - MIR SINE MIR -10 252 30 4668 160 109 40 chr5 171327696 171327906 -28302244 + LTR28 LTR ERV1 1 195 -825 2238 103 0 0 chr5 171327906 171328188 -28301962 - AluSq SINE Alu -11 302 21 4668 160 109 40 chr5 171328188 171328931 -28301219 + LTR28 LTR ERV1 195 1020 0 261 389 45 13 chr5 171329000 171329157 -28300993 + MIR SINE MIR 27 188 -74 346 319 56 14 chr5 171329561 171329705 -28300445 - L2 LINE L2 -236 3077 2928 2186 119 0 3 chr5 171330025 171330328 -28299822 + AluSc SINE Alu 1 302 -7 275 280 17 8 chr5 171331545 171331663 -28298487 - MLT1L LTR MaLR -347 268 150 306 328 35 36 chr5 171332569 171332746 -28297404 + MIR3 SINE MIR 28 206 -2 756 177 30 0 chr5 171332784 171332948 -28297202 + L1M4 LINE L1 5291 5459 -719 209 185 37 0 chr5 171333312 171333366 -28296784 + (CATATA)n Simple_repeat Simple_repeat 1 56 0 203 318 0 0 chr5 171333369 171333432 -28296718 + (TATG)n Simple_repeat Simple_repeat 3 65 0 254 256 23 12 chr5 171333435 171333521 -28296629 - L1MC4 LINE L1 -1341 6701 6615 336 281 0 0 chr5 171333537 171333676 -28296474 + (TA)n Simple_repeat Simple_repeat 1 139 0 2203 109 0 10 chr5 171335808 171336110 -28294040 - AluSg1 SINE Alu -10 299 1 2643 96 75 0 chr5 171336311 171336724 -28293426 + MER1A DNA MER1_type 86 533 0 265 316 128 8 chr5 171337041 171337158 -28292992 + MIR3 SINE MIR 30 160 -48 402 299 41 14 chr5 171338052 171338199 -28291951 - MIR SINE MIR -20 242 92 497 264 94 5 chr5 171339776 171339988 -28290162 + Tigger8 DNA MER2_type 306 536 -130 400 288 106 35 chr5 171341674 171341872 -28288278 - L2 LINE L2 -1494 1820 1609 940 45 0 0 chr5 171342415 171342525 -28287625 - AluY SINE Alu -13 298 189 353 257 38 0 chr5 171342765 171342870 -28287280 - L1MC4 LINE L1 -15 8027 7919 206 306 0 28 chr5 171342874 171342946 -28287204 + CT-rich Low_complexity Low_complexity 1 70 0 692 202 6 18 chr5 171342980 171343148 -28287002 - L1MC4 LINE L1 -188 7854 7689 198 0 0 0 chr5 171343148 171343170 -28286980 + (T)n Simple_repeat Simple_repeat 1 22 0 23 0 0 0 chr5 171343646 171343669 -28286481 + AT_rich Low_complexity Low_complexity 1 23 0 669 307 117 3 chr5 171343813 171344139 -28286011 - MLT1J1 LTR MaLR -15 431 69 25 65 0 0 chr5 171344573 171344619 -28285531 + AT_rich Low_complexity Low_complexity 1 46 0 329 280 26 58 chr5 171345154 171345343 -28284807 + L2 LINE L2 3101 3283 -30 1788 340 56 2 chr5 171345725 171346263 -28283887 + L1MB3 LINE L1 5617 6183 0 1110 264 120 36 chr5 171346804 171347601 -28282549 - L2 LINE L2 0 3313 2440 359 309 70 30 chr5 171348341 171348542 -28281608 + MIR SINE MIR 18 226 -36 183 250 0 0 chr5 171349426 171349466 -28280684 - MIR3 SINE MIR -1 207 168 702 299 83 4 chr5 171349494 171349735 -28280415 + MIR SINE MIR 3 262 0 287 278 142 45 chr5 171349750 171349926 -28280224 - MIR SINE MIR -56 206 14 2171 121 3 10 chr5 171350967 171351281 -28278869 + AluSx SINE Alu 1 312 0 250 304 112 16 chr5 171351282 171351407 -28278743 + MIR3 SINE MIR 23 159 -49 316 370 37 76 chr5 171351909 171352317 -28277833 + L2 LINE L2 2881 3272 0 418 344 15 8 chr5 171352869 171353000 -28277150 + MIR SINE MIR 16 147 -61 229 248 75 93 chr5 171353344 171353505 -28276645 - L2 LINE L2 -189 3083 2926 263 316 83 42 chr5 171353561 171353754 -28276396 - MIR SINE MIR -12 250 50 231 322 174 9 chr5 171353988 171354103 -28276047 + MIR SINE MIR 16 149 -113 24 32 0 0 chr5 171354111 171354142 -28276008 + AT_rich Low_complexity Low_complexity 1 31 0 463 107 0 180 chr5 171357218 171357340 -28272810 - MER1B DNA MER1_type -3 336 237 * 707 204 8 0 chr5 171357336 171357468 -28272682 - MER1B DNA MER1_type -164 133 1 324 227 136 3 chr5 171357470 171357605 -28272545 + MIR SINE MIR 4 191 -71 5287 163 39 68 chr5 171357655 171358227 -28271923 + Tigger3b DNA MER2_type 41 628 -2400 2056 122 7 14 chr5 171358227 171358521 -28271629 + AluSq SINE Alu 5 296 -17 5287 163 39 68 chr5 171358521 171359174 -28270976 + Tigger3b DNA MER2_type 628 1231 0 1944 159 8 31 chr5 171359180 171359531 -28270619 - MER2 DNA MER2_type 0 344 2 255 313 223 0 chr5 171359980 171360092 -28270058 - L2 LINE L2 0 3272 3136 3948 142 68 34 chr5 171360128 171360887 -28269263 - LTR1 LTR ERV1 0 785 1 1581 196 82 22 chr5 171361096 171361498 -28268652 - MER63B DNA MER1_type -2 434 9 279 333 10 10 chr5 171361580 171361676 -28268474 + MIR3 SINE MIR 14 109 -99 769 220 44 52 chr5 171362332 171362582 -28267568 + ORSL DNA AcHobo 28 275 0 2699 152 44 9 chr5 171362855 171363395 -28266755 - MER89 LTR ERV1 0 559 1 316 265 233 26 chr5 171363397 171363586 -28266564 - MIR SINE MIR -31 231 4 253 290 14 14 chr5 171363587 171363656 -28266494 + MIR3 SINE MIR 116 184 -24 391 345 111 0 chr5 171364500 171364735 -28265415 - MIR SINE MIR 0 262 2 708 281 24 20 chr5 171365178 171365424 -28264726 + MLT1J1 LTR MaLR 50 296 -150 811 146 124 28 chr5 171365443 171365621 -28264529 - MER3 DNA MER1_type -6 203 9 285 340 20 0 chr5 171365751 171365851 -28264299 - L2 LINE L2 -13 3300 3199 305 288 126 9 chr5 171366364 171366475 -28263675 + L2 LINE L2 3137 3260 -12 873 204 30 0 chr5 171366698 171366865 -28263285 - MER5A DNA MER1_type 0 189 18 233 271 34 93 chr5 171367773 171367905 -28262245 + MER5A DNA MER1_type 50 174 -4 425 287 46 0 chr5 171368217 171368325 -28261825 - L2 LINE L2 -15 3298 3186 2593 181 45 2 chr5 171368374 171368904 -28261246 - L1MB3 LINE L1 -7 6176 5624 2141 151 22 69 chr5 171368912 171369421 -28260729 - LTR43 LTR ERV1 -13 589 105 221 311 79 55 chr5 171369937 171370101 -28260049 + MIR SINE MIR 16 183 -79 2020 153 3 3 chr5 171370405 171370706 -28259444 - AluSx SINE Alu -11 301 1 21 82 0 0 chr5 171371300 171371349 -28258801 + AT_rich Low_complexity Low_complexity 1 49 0 1026 243 58 7 chr5 171371391 171371667 -28258483 + MLT1E1 LTR MaLR 3 292 -362 322 315 107 0 chr5 171371767 171371916 -28258234 + MLT1E1 LTR MaLR 490 654 0 204 40 0 0 chr5 171372995 171373020 -28257130 + (TCTCC)n Simple_repeat Simple_repeat 3 27 0 342 254 70 26 chr5 171373206 171373320 -28256830 - MIR SINE MIR -49 213 95 262 54 71 89 chr5 171373320 171373376 -28256774 - MLT2A1 LTR ERVL 0 453 399 198 0 0 0 chr5 171373391 171373413 -28256737 + (CA)n Simple_repeat Simple_repeat 2 23 0 2673 93 20 8 chr5 171373413 171373812 -28256338 - MLT2A1 LTR ERVL -40 404 1 253 267 63 105 chr5 171373918 171374109 -28256041 + L2 LINE L2 3071 3253 -19 2272 103 0 3 chr5 171374930 171375231 -28254919 - AluSq SINE Alu -13 300 1 287 253 12 48 chr5 171375414 171375497 -28254653 + MIR SINE MIR 72 151 -111 461 321 18 18 chr5 171376145 171376313 -28253837 + MIR SINE MIR 30 197 -65 354 365 56 15 chr5 171376578 171376672 -28253478 + MIR SINE MIR 46 135 -127 2980 99 55 0 chr5 171376672 171377105 -28253045 + L1PA16 LINE L1 5701 6157 -9 354 365 56 15 chr5 171377105 171377207 -28252943 + MIR SINE MIR 135 250 -12 629 280 51 9 chr5 171378056 171378270 -28251880 + MIR SINE MIR 13 235 -27 323 322 11 58 chr5 171379046 171379220 -28250930 - MIR SINE MIR -68 194 29 420 289 67 79 chr5 171379261 171379357 -28250793 - L2 LINE L2 0 3313 3217 2771 19 0 6 chr5 171379357 171379669 -28250481 - AluYb8 SINE Alu -8 310 1 420 289 67 79 chr5 171379669 171379901 -28250249 - L2 LINE L2 -96 3217 2989 1111 154 0 32 chr5 171380064 171380252 -28249898 - AluJo SINE Alu -27 285 104 1140 174 46 36 chr5 171381057 171381276 -28248874 - MER58A DNA MER1_type -1 223 3 2843 96 12 2 chr5 171382692 171383097 -28247053 + L1PB1 LINE L1 5743 6151 0 278 323 48 16 chr5 171383344 171383468 -28246682 - MIR SINE MIR -57 151 24 204 67 0 0 chr5 171386345 171386375 -28243775 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 213 274 78 78 chr5 171386620 171386722 -28243428 + MIR SINE MIR 42 143 -119 198 0 0 0 chr5 171387601 171387623 -28242527 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 832 209 32 36 chr5 171387919 171388139 -28242011 - MER20 DNA MER1_type 0 219 1 337 113 0 25 chr5 171388414 171388494 -28241656 + (TTATA)n Simple_repeat Simple_repeat 1 78 0 853 117 4 17 chr5 171388508 171388748 -28241402 + (TTATA)n Simple_repeat Simple_repeat 1 237 0 29 0 0 0 chr5 171388748 171388777 -28241373 + AT_rich Low_complexity Low_complexity 1 29 0 346 266 43 87 chr5 171389021 171389181 -28240969 + MIR SINE MIR 48 201 -61 1977 217 87 8 chr5 171389940 171390447 -28239703 - MER68 LTR ERV1 -10 552 6 256 269 164 0 chr5 171390488 171390592 -28239558 - MIR SINE MIR -103 159 39 12654 189 43 14 chr5 171390853 171396893 -28233257 - L1PB2 LINE L1 -3 6205 8 5228 195 15 26 chr5 171396865 171396985 -28233165 - L1PBa LINE L1 -5224 980 860 * 191 0 103 0 chr5 171396985 171397014 -28233136 + T-rich Low_complexity Low_complexity 2 33 0 2116 121 0 0 chr5 171397017 171397298 -28232852 - AluSq SINE Alu -32 281 1 5228 195 15 26 chr5 171397298 171398346 -28231804 - L1PBa LINE L1 -5346 858 -179 181 268 113 0 chr5 171398570 171398641 -28231509 - MIR SINE MIR -182 80 2 212 350 55 55 chr5 171398714 171398914 -28231236 + MIR SINE MIR 20 219 -43 403 302 77 69 chr5 171399045 171399449 -28230701 - MLT1K LTR MaLR -140 448 42 422 305 17 0 chr5 171400417 171400535 -28229615 - MIR3 SINE MIR -8 200 81 385 313 35 79 chr5 171401161 171401388 -28228762 + L2 LINE L2 2935 3151 -121 186 43 0 0 chr5 171401630 171401653 -28228497 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 410 298 96 27 chr5 171401780 171401966 -28228184 - MIR3 SINE MIR 0 208 3 414 282 124 39 chr5 171404118 171404352 -28225798 - MIR SINE MIR -1 261 8 525 299 35 5 chr5 171404378 171404575 -28225575 - MIR SINE MIR 0 262 60 554 168 5 147 chr5 171404734 171404924 -28225226 - MER106B DNA MER1_type -1 1058 896 4101 179 47 17 chr5 171405246 171406299 -28223851 - L1MB5 LINE L1 0 6174 5092 399 292 97 36 chr5 171406519 171406714 -28223436 + MIR SINE MIR 3 209 -53 282 319 85 14 chr5 171407587 171407728 -28222422 + MIR3 SINE MIR 1 151 -57 356 337 95 37 chr5 171408003 171408246 -28221904 - L2 LINE L2 -1 3312 3056 2186 114 14 0 chr5 171408276 171408565 -28221585 - AluSx SINE Alu -19 293 1 406 236 16 32 chr5 171408915 171409038 -28221112 + MIR SINE MIR 30 150 -58 306 73 0 0 chr5 171409331 171409372 -28220778 + (TC)n Simple_repeat Simple_repeat 1 41 0 721 323 13 9 chr5 171410800 171411029 -28219121 + MIR SINE MIR 7 236 -26 300 158 0 0 chr5 171411043 171411100 -28219050 + (CA)n Simple_repeat Simple_repeat 1 57 0 243 341 11 0 chr5 171411141 171411229 -28218921 - L2 LINE L2 0 3313 3225 188 355 79 0 chr5 171411255 171411331 -28218819 + L2 LINE L2 3193 3274 -39 585 304 13 0 chr5 171412071 171412229 -28217921 - MIR3 SINE MIR -5 203 44 1621 113 25 0 chr5 171412822 171413062 -28217088 + L1PA10 LINE L1 5912 6157 -11 656 250 49 66 chr5 171413082 171413326 -28216824 - MIR SINE MIR -15 247 8 224 328 56 31 chr5 171413335 171413530 -28216620 - L3 LINE CR1 -70 1507 1308 2084 124 3 40 chr5 171413980 171414302 -28215848 - AluSx SINE Alu -2 310 1 265 329 107 21 chr5 171414551 171414691 -28215459 + L2 LINE L2 3121 3272 0 288 130 0 58 chr5 171414801 171414870 -28215280 + AluS SINE Alu 1 65 -238 1206 139 0 6 chr5 171414974 171415154 -28214996 + AluSq SINE Alu 129 307 -6 201 74 0 0 chr5 171415813 171415840 -28214310 + (A)n Simple_repeat Simple_repeat 1 27 0 381 117 0 0 chr5 171416320 171416380 -28213770 + (TCCCC)n Simple_repeat Simple_repeat 2 61 0 895 226 25 0 chr5 171416439 171416643 -28213507 + L3 LINE CR1 399 607 -970 791 265 26 4 chr5 171417149 171417383 -28212767 - MIR SINE MIR -14 248 10 1073 344 146 29 chr5 171417897 171418714 -28211436 + L3 LINE CR1 600 1511 -66 1379 223 58 77 chr5 171418718 171418802 -28211348 + L1ME1 LINE L1 5686 5770 -396 934 182 101 5 chr5 171418802 171419000 -28211150 + MER20 DNA MER1_type 1 217 -2 1379 223 58 77 chr5 171419000 171419396 -28210754 + L1ME1 LINE L1 5770 6157 -9 304 236 124 43 chr5 171420298 171420459 -28209691 - LTR41 LTR ERVL -599 174 1 1086 206 19 27 chr5 171420511 171420768 -28209382 + MER76 LTR ERV 52 306 -382 2342 183 60 4 chr5 171420937 171421455 -28208695 + MLT1-int LTR MaLR 4 550 -821 572 263 28 22 chr5 171421469 171421648 -28208502 + MLT1C LTR MaLR 288 467 0 250 281 0 0 chr5 171422624 171422681 -28207469 + MIR SINE MIR 41 97 -111 180 77 0 0 chr5 171422915 171422941 -28207209 + (CAGG)n Simple_repeat Simple_repeat 4 29 0 246 291 73 9 chr5 171423320 171423430 -28206720 + MIR SINE MIR 91 207 -55 227 300 62 25 chr5 171423969 171424049 -28206101 - L2 LINE L2 -23 3290 3208 284 224 17 0 chr5 171424134 171424192 -28205958 - MER5A DNA MER1_type 0 189 131 189 159 0 0 chr5 171425366 171425410 -28204740 + (TGAA)n Simple_repeat Simple_repeat 4 47 0 420 275 38 12 chr5 171425563 171425723 -28204427 + MER103 DNA DNA 1 164 -2 192 356 10 39 chr5 171427154 171427258 -28202892 - MIR3 SINE MIR -10 198 98 579 88 0 0 chr5 171427541 171427621 -28202529 + MADE1 DNA Mariner 1 80 0 1266 161 165 8 chr5 171428350 171428617 -28201533 + AluJo SINE Alu 1 305 0 850 293 36 4 chr5 171428662 171428855 -28201295 - MIR SINE MIR -26 236 34 2184 132 0 3 chr5 171428855 171429158 -28200992 - AluSg SINE Alu -8 302 1 850 293 36 4 chr5 171429158 171429189 -28200961 - MIR SINE MIR -228 34 5 262 154 491 18 chr5 171429869 171429979 -28200171 - MER5A DNA MER1_type -2 187 26 254 333 74 30 chr5 171431171 171431306 -28198844 + MIR SINE MIR 4 144 -118 846 197 137 4 chr5 171431340 171431573 -28198577 - ORSL DNA AcHobo -1 274 11 187 262 0 0 chr5 171431584 171431626 -28198524 + L2 LINE L2 3201 3242 -30 1013 205 26 0 chr5 171431646 171431841 -28198309 - MER58A DNA MER1_type -23 201 2 258 305 56 76 chr5 171432604 171432703 -28197447 + MIR SINE MIR 57 152 -110 1763 182 27 3 chr5 171432703 171432999 -28197151 + AluJo SINE Alu 1 303 -9 258 305 56 76 chr5 171432999 171433096 -28197054 + MIR SINE MIR 152 249 -13 257 351 52 8 chr5 171433202 171433336 -28196814 + MIR SINE MIR 50 189 -73 2068 142 0 0 chr5 171433346 171433634 -28196516 + AluSx SINE Alu 1 288 -24 227 197 30 45 chr5 171434284 171434350 -28195800 - MIR SINE MIR -50 212 148 2252 44 0 0 chr5 171434998 171435271 -28194879 - L1PA3 LINE L1 -14 6141 5869 2166 224 95 23 chr5 171435800 171437062 -28193088 + L1ME2 LINE L1 4488 5896 -266 2085 133 0 17 chr5 171437062 171437364 -28192786 - AluSx SINE Alu -15 297 1 2166 224 95 23 chr5 171437364 171437652 -28192498 + L1ME2 LINE L1 5896 6162 0 461 169 0 0 chr5 171437841 171437918 -28192232 - Tigger7 DNA MER2_type -6 2581 2505 501 216 0 0 chr5 171437918 171438029 -28192121 - Tigger5 DNA MER2_type 0 2323 2213 989 205 50 0 chr5 171438031 171438231 -28191919 - Tigger7 DNA MER2_type -495 210 1 410 353 82 6 chr5 171438295 171438465 -28191685 - MER5A DNA MER1_type 0 189 7 670 194 73 26 chr5 171438709 171438900 -28191250 + MER20 DNA MER1_type 16 215 -4 636 280 19 38 chr5 171439477 171439688 -28190462 + MIR SINE MIR 54 260 -2 183 156 0 0 chr5 171441680 171441712 -28188438 + A-rich Low_complexity Low_complexity 1 32 0 181 208 83 0 chr5 171442746 171442794 -28187356 + MIR SINE MIR 124 175 -87 2173 125 0 0 chr5 171443226 171443522 -28186628 - AluSx SINE Alu -16 296 1 2249 107 7 10 chr5 171443727 171444037 -28186113 - AluSx SINE Alu -3 309 1 338 224 120 24 chr5 171444064 171444189 -28185961 + MER102b DNA MER1_type 205 341 0 361 233 65 73 chr5 171444956 171445188 -28184962 - MLT1K LTR MaLR -187 401 172 246 312 26 45 chr5 171445662 171445816 -28184334 + MIR SINE MIR 91 241 -21 362 301 155 9 chr5 171446005 171446218 -28183932 - MER102b DNA MER1_type -97 244 1 213 226 0 65 chr5 171446261 171446323 -28183827 + MIR SINE MIR 126 183 -79 225 160 20 20 chr5 171446934 171446984 -28183166 + MER3 DNA MER1_type 31 80 -129 225 0 0 0 chr5 171447459 171447484 -28182666 + (T)n Simple_repeat Simple_repeat 1 25 0 806 214 6 0 chr5 171447524 171447692 -28182458 - MER20 DNA MER1_type -2 217 49 719 266 34 6 chr5 171447704 171447881 -28182269 - L2 LINE L2 -266 3047 2866 184 394 0 0 chr5 171448940 171449006 -28181144 - L2 LINE L2 -16 3256 3191 * 324 278 11 22 chr5 171449005 171449095 -28181055 - MIR SINE MIR -121 141 53 10877 210 45 48 chr5 171450001 171450026 -28180124 + L1M2 LINE L1 3 27 -6821 1973 134 28 3 chr5 171450026 171450317 -28179833 + AluSx SINE Alu 1 298 -14 10877 210 45 48 chr5 171450317 171452153 -28177997 + L1M2 LINE L1 27 1867 -4981 2499 94 0 0 chr5 171452153 171452462 -28177688 + AluSg SINE Alu 1 309 -1 10877 210 45 48 chr5 171452462 171452600 -28177550 + L1M2 LINE L1 1867 2004 -4844 203 0 37 0 chr5 171452600 171452627 -28177523 + (TA)n Simple_repeat Simple_repeat 2 29 0 10877 210 45 48 chr5 171452627 171456206 -28173944 + L1M2 LINE L1 2004 5564 -1284 708 236 6 28 chr5 171456893 171457075 -28173075 - MLT2B1 LTR ERVL -13 507 330 860 162 53 53 chr5 171457156 171457206 -28172944 - L1MA8 LINE L1 -6 6285 6236 4848 45 2 7 chr5 171457206 171457803 -28172347 - L1PA7 LINE L1 -3 6151 5558 860 162 53 53 chr5 171457803 171457999 -28172151 - L1MA8 LINE L1 -54 6237 6039 347 184 13 0 chr5 171457999 171458075 -28172075 - MLT2B1 LTR ERVL -443 77 1 382 297 34 122 chr5 171459209 171459529 -28170621 + L2 LINE L2 2665 2956 -358 248 257 81 59 chr5 171461259 171461395 -28168755 - MLT1I LTR MaLR -169 240 102 517 256 111 12 chr5 171461433 171461605 -28168545 + MLT1I LTR MaLR 217 405 -4 252 351 0 0 chr5 171461702 171461776 -28168374 - MIR SINE MIR -182 80 7 246 179 0 0 chr5 171461781 171461837 -28168313 + CT-rich Low_complexity Low_complexity 2 57 0 204 40 0 0 chr5 171462251 171462276 -28167874 + (TC)n Simple_repeat Simple_repeat 1 25 0 180 0 0 0 chr5 171462275 171462295 -28167855 + (CA)n Simple_repeat Simple_repeat 1 20 0 * 189 363 135 12 chr5 171462467 171462712 -28167438 - L3b LINE CR1 -38 1545 1271 2480 225 48 2 chr5 171462926 171463552 -28166598 - L1MB7 LINE L1 -30 6154 5500 255 103 0 0 chr5 171463566 171463605 -28166545 + (TG)n Simple_repeat Simple_repeat 2 40 0 203 302 0 0 chr5 171463660 171463703 -28166447 + L2 LINE L2 3208 3250 -22 216 263 50 25 chr5 171463759 171463839 -28166311 + MIR SINE MIR 112 193 -69 275 285 59 43 chr5 171464592 171464778 -28165372 - MER106A DNA MER1_type -46 190 2 527 238 0 8 chr5 171464879 171465005 -28165145 - L2 LINE L2 0 3313 3189 2452 85 0 0 chr5 171466659 171466966 -28163184 - AluY SINE Alu -4 307 1 1312 217 54 7 chr5 171466978 171467255 -28162895 - AluJo SINE Alu -22 290 1 512 346 71 12 chr5 171468203 171468443 -28161707 + MIR SINE MIR 7 260 -2 399 272 97 114 chr5 171468519 171468544 -28161606 - L1ME4a LINE L1 -33 6088 6064 2225 120 0 10 chr5 171468544 171468843 -28161307 + AluSq SINE Alu 3 298 -15 399 272 97 114 chr5 171468843 171469013 -28161137 - L1ME4a LINE L1 -57 6064 5893 330 98 0 0 chr5 171469013 171469064 -28161086 + (TA)n Simple_repeat Simple_repeat 2 52 0 399 272 97 114 chr5 171469064 171469330 -28160820 - L1ME4a LINE L1 -228 5893 5634 422 273 60 37 chr5 171470118 171470334 -28159816 - MER102b DNA MER1_type -22 319 99 216 0 0 0 chr5 171470401 171470425 -28159725 + (CA)n Simple_repeat Simple_repeat 2 25 0 430 340 103 46 chr5 171470437 171470961 -28159189 + L1MC4a LINE L1 6043 6596 -1212 294 50 0 0 chr5 171470965 171471005 -28159145 + (CA)n Simple_repeat Simple_repeat 2 41 0 1218 208 54 75 chr5 171471029 171471655 -28158495 + L1MC5 LINE L1 6652 7264 -697 1497 193 74 49 chr5 171471695 171472166 -28157984 + MLT1D LTR MaLR 23 505 0 662 194 36 0 chr5 171472183 171472322 -28157828 + L1MC5 LINE L1 7289 7432 -529 372 221 46 42 chr5 171472458 171472718 -28157432 + L1MC5 LINE L1 7558 7901 -60 22 0 0 0 chr5 171472732 171472754 -28157396 + AT_rich Low_complexity Low_complexity 1 22 0 2103 134 3 0 chr5 171473763 171474054 -28156096 + AluSx SINE Alu 1 292 -20 354 322 46 33 chr5 171474094 171474246 -28155904 - MIR SINE MIR -3 259 106 308 89 0 0 chr5 171475169 171475214 -28154936 - MER58 DNA MER1_type -5 2415 2371 254 295 26 0 chr5 171475227 171475305 -28154845 - MER58 DNA MER1_type -98 117 38 518 333 92 14 chr5 171475886 171476180 -28153970 + L2 LINE L2 2502 2818 -496 274 325 121 56 chr5 171476197 171476446 -28153704 + L2 LINE L2 2994 3258 -14 2153 130 7 0 chr5 171476533 171476833 -28153317 + AluSg SINE Alu 1 302 -8 1455 168 66 14 chr5 171476916 171477202 -28152948 + MER7A DNA MER2_type 47 345 -1 21 57 0 0 chr5 171477208 171477243 -28152907 + AT_rich Low_complexity Low_complexity 1 35 0 312 279 142 0 chr5 171477267 171477457 -28152693 - L1ME1 LINE L1 -48 6118 5902 295 304 0 9 chr5 171477802 171477917 -28152233 - MLT1L LTR MaLR -499 116 3 331 322 72 47 chr5 171479310 171479546 -28150604 + MIR SINE MIR 13 254 -8 373 271 126 26 chr5 171479601 171479752 -28150398 - L3 LINE CR1 -42 1535 1370 250 277 0 36 chr5 171479825 171479908 -28150242 + L1ME LINE L1 5551 5630 -491 21693 171 36 29 chr5 171479982 171481334 -28148816 + L1PA6 LINE L1 10 1351 -5118 2029 144 0 3 chr5 171481334 171481640 -28148510 + AluSx SINE Alu 1 305 -7 21693 171 36 29 chr5 171481640 171483966 -28146184 + L1PA6 LINE L1 1351 3659 -2810 237 33 0 0 chr5 171483966 171483996 -28146154 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 21693 171 36 29 chr5 171483996 171485355 -28144795 + L1PA6 LINE L1 3659 5007 -1462 2339 101 0 0 chr5 171485355 171485661 -28144489 + AluY SINE Alu 1 306 -5 21693 171 36 29 chr5 171485661 171486971 -28143179 + L1PA6 LINE L1 5007 6465 -4 2536 110 18 0 chr5 171486980 171487363 -28142787 + L1PA10 LINE L1 5769 6158 -10 220 318 159 16 chr5 171487685 171487811 -28142339 - MIR3 SINE MIR -16 192 49 290 261 68 62 chr5 171488135 171488296 -28141854 + Charlie8 DNA MER1_type 1 162 -2255 1006 234 0 0 chr5 171488502 171488711 -28141439 + MER6B DNA MER2_type 1 209 -1 505 147 8 8 chr5 171488711 171488840 -28141310 + (TA)n Simple_repeat Simple_repeat 1 129 0 237 113 14 28 chr5 171488851 171488922 -28141228 + (TA)n Simple_repeat Simple_repeat 2 71 0 5207 177 19 16 chr5 171489057 171490662 -28139488 - L1MA9 LINE L1 -9 6303 4695 363 252 126 27 chr5 171492124 171492235 -28137915 + MIR SINE MIR 19 140 -68 439 321 72 10 chr5 171492507 171492716 -28137434 + L2 LINE L2 2998 3219 -94 997 231 29 12 chr5 171492726 171492968 -28137182 + MIR SINE MIR 2 247 -15 232 291 76 13 chr5 171493017 171493096 -28137054 + L2 LINE L2 3230 3313 0 2261 104 3 0 chr5 171493761 171494060 -28136090 + AluSc SINE Alu 1 300 -9 2225 120 3 3 chr5 171495184 171495493 -28134657 - AluSg SINE Alu -1 309 1 1132 177 30 126 chr5 171495590 171496006 -28134144 + MLT1A1 LTR MaLR 1 428 0 2351 102 0 3 chr5 171496442 171496746 -28133404 + AluSq SINE Alu 1 303 -10 250 305 12 12 chr5 171496903 171496985 -28133165 + MIR SINE MIR 171 252 -10 2133 122 0 3 chr5 171497070 171497366 -28132784 - AluY SINE Alu -6 305 11 191 330 34 34 chr5 171497481 171497569 -28132581 - MIR SINE MIR -67 195 108 579 216 94 11 chr5 171498208 171498389 -28131761 - MER105 DNA DNA -5 199 4 642 272 87 59 chr5 171499233 171499487 -28130663 + MIR SINE MIR 2 262 0 383 273 123 5 chr5 171500752 171500939 -28129211 - MIR SINE MIR -7 255 47 261 0 0 0 chr5 171501205 171501234 -28128916 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 432 0 0 0 chr5 171502075 171502123 -28128027 + (CA)n Simple_repeat Simple_repeat 1 48 0 180 363 33 11 chr5 171503262 171503353 -28126797 + L2 LINE L2 3176 3268 -4 21 0 0 0 chr5 171503860 171503881 -28126269 + AT_rich Low_complexity Low_complexity 1 21 0 3670 102 4 2 chr5 171503881 171504412 -28125738 - L1PB2 LINE L1 0 6151 5620 189 321 0 0 chr5 171504511 171504567 -28125583 + MIR SINE MIR 93 148 -114 386 318 87 10 chr5 171505431 171505626 -28124524 - L2 LINE L2 -3 3310 3101 637 345 134 25 chr5 171505695 171506174 -28123976 - L2 LINE L2 -341 2973 2443 458 299 78 37 chr5 171506285 171506529 -28123621 - MIR SINE MIR -8 254 1 522 301 99 33 chr5 171507164 171507377 -28122773 - MIR SINE MIR -34 228 2 568 206 89 20 chr5 171507741 171507887 -28122263 - MER20 DNA MER1_type 0 219 64 403 309 98 5 chr5 171508099 171508303 -28121847 + MIR SINE MIR 21 243 -19 194 340 110 10 chr5 171508839 171508939 -28121211 + MIR SINE MIR 6 115 -147 276 310 0 0 chr5 171509469 171509561 -28120589 - MIR SINE MIR -64 144 63 195 366 11 11 chr5 171509628 171509721 -28120429 + MIR3 SINE MIR 109 201 -7 261 304 35 52 chr5 171509902 171510017 -28120133 + MIR SINE MIR 23 135 -73 1865 130 43 69 chr5 171510021 171510367 -28119783 - MER1B DNA MER1_type 0 337 1 204 259 0 52 chr5 171510566 171510624 -28119526 + MIR3 SINE MIR 115 169 -39 259 230 54 0 chr5 171510723 171510797 -28119353 - MER103 DNA DNA -87 79 2 944 168 13 66 chr5 171511767 171511993 -28118157 - MER20 DNA MER1_type -4 215 2 2321 84 0 0 chr5 171512058 171512345 -28117805 - AluY SINE Alu -11 300 14 348 310 35 25 chr5 171512437 171512640 -28117510 - MLT1L LTR MaLR 0 615 411 377 323 32 43 chr5 171513159 171513345 -28116805 + MIR SINE MIR 46 229 -33 191 371 0 16 chr5 171514355 171514417 -28115733 - MIR SINE MIR -164 98 38 325 300 51 71 chr5 171514583 171514781 -28115369 - MIR SINE MIR -54 208 18 396 307 198 3 chr5 171515654 171515967 -28114183 + L2 LINE L2 2806 3179 -134 255 328 60 0 chr5 171516143 171516210 -28113940 + L2 LINE L2 3242 3312 -1 252 279 0 15 chr5 171516212 171516280 -28113870 + GA-rich Low_complexity Low_complexity 2 68 0 226 241 52 0 chr5 171516492 171516550 -28113600 + L2 LINE L2 2994 3054 -218 373 317 21 11 chr5 171516869 171517055 -28113095 + MER117 DNA MER1_type 9 196 -1 209 222 0 0 chr5 171517320 171517365 -28112785 + (TAA)n Simple_repeat Simple_repeat 3 47 0 2315 138 56 10 chr5 171517516 171517928 -28112222 - MSTB1 LTR MaLR -1 431 1 2614 182 17 4 chr5 171518071 171518588 -28111562 - L1MB7 LINE L1 -19 6165 5642 1060 189 33 29 chr5 171518588 171518690 -28111460 + MER44D DNA MER2_type 2 102 -2389 2204 127 3 0 chr5 171518690 171518989 -28111161 + AluSx SINE Alu 1 300 -12 1060 189 33 29 chr5 171518989 171519130 -28111020 + MER44D DNA MER2_type 102 516 -93 261 176 40 0 chr5 171519194 171519268 -28110882 + (TA)n Simple_repeat Simple_repeat 2 78 0 435 206 0 41 chr5 171519268 171519365 -28110785 + MER44D DNA MER2_type 613 705 0 3120 209 60 9 chr5 171519365 171520572 -28109578 - L1MB7 LINE L1 -530 5644 4372 628 257 21 0 chr5 171522077 171522217 -28107933 + MER58A DNA MER1_type 2 144 0 258 214 145 60 chr5 171522556 171522673 -28107477 + L2 LINE L2 3187 3313 0 252 0 0 0 chr5 171522705 171522733 -28107417 + (TA)n Simple_repeat Simple_repeat 2 29 0 465 345 56 8 chr5 171522754 171523003 -28107147 + MIR SINE MIR 2 262 0 375 308 75 0 chr5 171523653 171523773 -28106377 + MIR SINE MIR 49 177 -85 437 270 162 11 chr5 171524139 171524324 -28105826 + MIR SINE MIR 13 225 -37 263 323 59 67 chr5 171525338 171525592 -28104558 + MIR SINE MIR 1 252 -10 333 264 28 9 chr5 171525803 171525909 -28104241 + MIR3 SINE MIR 88 195 -13 379 359 68 23 chr5 171526396 171526616 -28103534 + MIR SINE MIR 20 249 -13 977 274 84 46 chr5 171526636 171527393 -28102757 - L2 LINE L2 0 3313 2524 41 66 0 0 chr5 171527410 171527486 -28102664 + AT_rich Low_complexity Low_complexity 1 76 0 2086 103 0 14 chr5 171527598 171527889 -28102261 - AluSq SINE Alu -26 287 1 406 354 0 0 chr5 171527935 171528082 -28102068 - MIR SINE MIR -85 177 31 2326 71 0 4 chr5 171528775 171529079 -28101071 + AluY SINE Alu 1 303 0 2091 164 19 12 chr5 171529094 171529510 -28100640 - L1MB3 LINE L1 -14 6169 5751 25 31 0 0 chr5 171530116 171530148 -28100002 + AT_rich Low_complexity Low_complexity 1 32 0 3741 53 0 2 chr5 171530160 171530630 -28099520 - L1PA7 LINE L1 -6 6148 5680 1528 74 65 0 chr5 171530630 171530861 -28099289 + L1P3 LINE L1 5317 5562 -592 404 284 91 14 chr5 171531128 171531558 -28098592 + MER113 DNA MER1_type? 6 518 -3 453 279 150 44 chr5 171531570 171531796 -28098354 - L3 LINE CR1 -162 1415 1166 253 146 0 0 chr5 171531847 171531888 -28098262 - MLT2D LTR ERVL -4 393 353 225 94 0 0 chr5 171531892 171531924 -28098226 + (TGGA)n Simple_repeat Simple_repeat 2 33 0 270 95 0 0 chr5 171531930 171531972 -28098178 + (GGGA)n Simple_repeat Simple_repeat 1 42 0 561 30 0 0 chr5 171531972 171532039 -28098111 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 1044 239 16 12 chr5 171532041 171532292 -28097858 - MLT2D LTR ERVL -72 342 91 543 310 38 24 chr5 171532502 171532715 -28097435 - MIR SINE MIR 0 262 47 2074 120 31 0 chr5 171532715 171533007 -28097143 + AluSx SINE Alu 1 301 -11 382 294 166 6 chr5 171533604 171533767 -28096383 - L3 LINE CR1 -459 1118 930 943 280 116 36 chr5 171533771 171533917 -28096233 - L2 LINE L2 0 3313 3180 2245 84 0 48 chr5 171533917 171534228 -28095922 + AluSx SINE Alu 1 296 -16 943 280 116 36 chr5 171534228 171534712 -28095438 - L2 LINE L2 -133 3180 2631 870 321 71 28 chr5 171534729 171535244 -28094906 - L1M4 LINE L1 -3277 2869 2320 1401 83 25 29 chr5 171535244 171535448 -28094702 - L1PA12 LINE L1 -2 6166 5964 870 321 71 28 chr5 171535448 171535567 -28094583 - L1M4 LINE L1 -3826 2320 2208 2094 121 3 10 chr5 171535640 171535954 -28094196 - AluSx SINE Alu 0 312 1 3570 182 23 10 chr5 171536357 171537065 -28093085 - L1MB5 LINE L1 -10 6164 5448 1788 179 3 13 chr5 171538289 171538596 -28091554 - AluJo SINE Alu -4 308 5 418 270 147 33 chr5 171538636 171538847 -28091303 - MIR SINE MIR -16 246 12 197 309 123 25 chr5 171538965 171539046 -28091104 - MIR SINE MIR -37 225 137 323 276 150 8 chr5 171539046 171539173 -28090977 - MIR SINE MIR -104 158 14 286 297 85 17 chr5 171540064 171540182 -28089968 + MIR SINE MIR 50 175 -87 265 264 45 26 chr5 171540370 171540525 -28089625 + MER103 DNA DNA 7 164 -2 35783 87 11 7 chr5 171540540 171546661 -28083489 - L1PA6 LINE L1 -6 6148 11 25 0 0 0 chr5 171546678 171546703 -28083447 + AT_rich Low_complexity Low_complexity 1 25 0 279 234 0 0 chr5 171547382 171547459 -28082691 + (CA)n Simple_repeat Simple_repeat 2 78 0 609 292 121 66 chr5 171547821 171548276 -28081874 + L2 LINE L2 2324 2803 -511 538 319 132 36 chr5 171548294 171548711 -28081439 + L1 LINE L1 4724 5180 -966 207 369 11 20 chr5 171548739 171548885 -28081265 + L2 LINE L2 2854 3060 -253 280 273 13 13 chr5 171549523 171549600 -28080550 - L2 LINE L2 0 3313 3237 230 333 101 10 chr5 171550285 171550384 -28079766 + L3 LINE CR1 1338 1445 -132 3949 183 68 30 chr5 171550472 171551455 -28078695 - L1MC3 LINE L1 -7 7778 6758 339 324 29 44 chr5 171551576 171551712 -28078438 - MIR SINE MIR -113 149 16 220 314 69 49 chr5 171552508 171552610 -28077540 + L2 LINE L2 3186 3289 -24 747 262 11 92 chr5 171552775 171553145 -28077005 + MER58B DNA MER1_type 1 340 -1 342 0 0 0 chr5 171553596 171553634 -28076516 + (TG)n Simple_repeat Simple_repeat 1 38 0 478 311 28 28 chr5 171555365 171555545 -28074605 + CT-rich Low_complexity Low_complexity 1 180 0 204 40 0 0 chr5 171555655 171555680 -28074470 + (CA)n Simple_repeat Simple_repeat 2 26 0 401 262 40 66 chr5 171557675 171557850 -28072300 - MIR SINE MIR -66 142 27 2140 208 58 30 chr5 171557857 171558411 -28071739 + MER90 LTR ERV1 1 611 -3 21 0 0 0 chr5 171558801 171558822 -28071328 + AT_rich Low_complexity Low_complexity 1 21 0 397 339 24 18 chr5 171559075 171559243 -28070907 + L3 LINE CR1 1328 1496 -81 274 74 37 0 chr5 171559487 171559541 -28070609 + (TC)n Simple_repeat Simple_repeat 1 56 0 1476 177 49 26 chr5 171559731 171560084 -28070066 + MLT1A1 LTR MaLR 1 365 0 236 350 19 29 chr5 171560326 171560429 -28069721 + MER5B DNA MER1_type 1 102 -76 522 285 88 26 chr5 171560550 171560778 -28069372 + MIR SINE MIR 7 248 -14 232 254 0 0 chr5 171560785 171560840 -28069310 + (CTA)n Simple_repeat Simple_repeat 2 56 0 616 299 60 24 chr5 171560865 171561116 -28069034 + MIR SINE MIR 2 261 -1 203 383 0 11 chr5 171561669 171561763 -28068387 + MIR SINE MIR 55 147 -61 2193 139 37 6 chr5 171561889 171562241 -28067909 - THE1B LTR MaLR 0 364 2 338 294 130 56 chr5 171562377 171562608 -28067542 - MIR SINE MIR -14 248 1 229 250 48 36 chr5 171562643 171562727 -28067423 - MIR SINE MIR -164 98 14 2067 151 0 0 chr5 171562873 171563178 -28066972 + AluSg SINE Alu 1 305 -5 197 345 35 0 chr5 171563896 171563983 -28066167 + MIR SINE MIR 49 138 -70 204 333 0 0 chr5 171564208 171564271 -28065879 + L3 LINE CR1 1106 1168 -409 333 333 104 22 chr5 171564401 171564623 -28065527 + MIR SINE MIR 13 252 -10 12607 190 44 17 chr5 171564642 171566286 -28063864 - L1MA6 LINE L1 0 7719 6121 2236 88 7 0 chr5 171566286 171566592 -28063558 - AluY SINE Alu -3 308 1 12607 190 44 17 chr5 171566592 171569193 -28060957 - L1MA6 LINE L1 -1598 6121 3314 503 157 47 12 chr5 171569323 171569495 -28060655 + (TA)n Simple_repeat Simple_repeat 2 179 0 40763 51 3 1 chr5 171569666 171575800 -28054350 - L1PA4 LINE L1 -6 6149 2 4032 237 58 6 chr5 171575798 171577032 -28053118 - L1MA6 LINE L1 -4154 3412 2114 * 1357 308 64 32 chr5 171577235 171577858 -28052292 - L1MA6 LINE L1 -6134 1432 790 685 239 31 12 chr5 171578175 171578338 -28051812 + MER5A DNA MER1_type 1 166 -23 836 232 4 69 chr5 171578445 171578560 -28051590 - MIR SINE MIR -4 258 137 222 37 0 0 chr5 171578560 171578587 -28051563 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 1803 157 8 0 chr5 171578588 171578855 -28051295 - AluSx SINE Alu -43 269 1 836 232 4 69 chr5 171578855 171578970 -28051180 - MIR SINE MIR -124 138 41 228 257 79 59 chr5 171580248 171580349 -28049801 - L2 LINE L2 -33 3239 3137 471 261 93 0 chr5 171580569 171580730 -28049420 - MLT1K LTR MaLR -2 586 411 501 281 135 27 chr5 171580859 171581044 -28049106 - MLT1K LTR MaLR -358 230 26 1035 271 113 43 chr5 171581183 171581386 -28048764 + L2 LINE L2 2887 3074 -239 1030 198 40 31 chr5 171581386 171581608 -28048542 + MER58A DNA MER1_type 1 224 0 1035 271 113 43 chr5 171581608 171581803 -28048347 + L2 LINE L2 3074 3313 0 252 358 89 54 chr5 171581858 171582263 -28047887 - L2 LINE L2 -667 2647 2229 230 250 19 0 chr5 171582630 171582682 -28047468 + CT-rich Low_complexity Low_complexity 2 54 0 180 0 0 0 chr5 171583203 171583223 -28046927 + (A)n Simple_repeat Simple_repeat 1 20 0 2300 83 3 0 chr5 171583634 171583934 -28046216 - AluY SINE Alu -10 301 1 393 307 79 0 chr5 171584689 171584816 -28045334 + MIR SINE MIR 22 158 -104 222 353 160 17 chr5 171585685 171585804 -28044346 - L2 LINE L2 0 3272 3137 2133 135 0 3 chr5 171585804 171586101 -28044049 - AluSg SINE Alu -14 296 1 199 220 60 0 chr5 171586213 171586263 -28043887 - L2 LINE L2 -216 3056 3004 534 359 85 9 chr5 171586422 171586645 -28043505 - MIR SINE MIR -2 260 21 248 123 108 15 chr5 171586661 171586726 -28043424 - L1MB8 LINE L1 -13 6165 6095 2003 147 0 0 chr5 171586761 171587091 -28043059 + AluSx SINE Alu 1 330 0 1224 184 37 42 chr5 171587133 171587479 -28042671 - MER39 LTR ERV1 -57 650 175 285 238 5 10 chr5 171587512 171587622 -28042528 - LTR48B LTR ERV1 -503 82 1 266 194 39 16 chr5 171587634 171587763 -28042387 + (TA)n Simple_repeat Simple_repeat 2 133 0 184 330 60 10 chr5 171587823 171587923 -28042227 - L2 LINE L2 -509 2805 2701 2407 92 0 0 chr5 171588910 171589216 -28040934 + AluY SINE Alu 1 306 -5 539 242 53 21 chr5 171589812 171590002 -28040148 - Charlie4 DNA MER1_type 0 1961 1766 * 833 242 31 11 chr5 171589999 171590259 -28039891 - Charlie4 DNA MER1_type -1683 278 14 246 181 42 69 chr5 171590310 171590382 -28039768 - L2 LINE L2 -18 3295 3226 774 191 34 57 chr5 171590580 171590789 -28039361 + MER20 DNA MER1_type 16 219 0 209 337 75 48 chr5 171592188 171592375 -28037775 - MIR SINE MIR -70 192 1 2703 138 21 0 chr5 171592523 171592942 -28037208 - MSTA LTR MaLR 0 428 1 306 321 110 29 chr5 171593442 171593651 -28036499 + MIR SINE MIR 37 262 0 337 272 78 0 chr5 171593658 171593761 -28036389 + MIR SINE MIR 104 214 -48 1134 193 5 0 chr5 171594240 171594437 -28035713 - MER58A DNA MER1_type -26 198 1 2403 99 0 3 chr5 171594459 171594772 -28035378 - AluSq SINE Alu -1 312 1 423 281 88 9 chr5 171594838 171594952 -28035198 + L2 LINE L2 3150 3272 0 527 211 9 9 chr5 171595046 171595160 -28034990 - MIR SINE MIR 0 262 149 266 310 0 0 chr5 171595481 171595552 -28034598 + L2 LINE L2 3190 3260 -12 24 0 0 0 chr5 171596070 171596094 -28034056 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 171596598 171596622 -28033528 + AT_rich Low_complexity Low_complexity 1 24 0 334 237 44 67 chr5 171596796 171596931 -28033219 - MLT1K LTR MaLR -343 245 114 614 250 195 5 chr5 171598083 171598283 -28031867 + MIR SINE MIR 17 254 -8 1080 117 46 51 chr5 171598859 171599055 -28031095 + L1PA11 LINE L1 5977 6171 -3 240 35 0 0 chr5 171599063 171599092 -28031058 + (CAA)n Simple_repeat Simple_repeat 2 30 0 641 239 57 25 chr5 171599100 171599383 -28030767 + L1ME1 LINE L1 5861 6112 -54 1558 203 11 7 chr5 171599551 171599837 -28030313 + AluJb SINE Alu 1 287 -25 3190 38 0 0 chr5 171599861 171600261 -28029889 + L1P2 LINE L1 5359 5758 -397 7053 37 0 2 chr5 171603079 171603926 -28026224 + L1PA4 LINE L1 5311 6155 0 26 30 0 0 chr5 171604937 171604970 -28025180 + AT_rich Low_complexity Low_complexity 1 33 0 399 226 11 0 chr5 171606281 171606374 -28023776 + L1MD3 LINE L1 7839 7932 -63 1645 161 36 18 chr5 171607281 171607555 -28022595 + AluJb SINE Alu 19 297 -15 1337 145 13 59 chr5 171607557 171607861 -28022289 + AluSq SINE Alu 1 290 -23 306 0 0 0 chr5 171607872 171607906 -28022244 + (CAAAA)n Simple_repeat Simple_repeat 4 37 0 881 191 6 35 chr5 171608589 171608762 -28021388 + AluJo SINE Alu 114 281 -31 3607 208 31 14 chr5 171608795 171609719 -28020431 - L1 LINE L1 -1914 4232 3293 270 0 0 0 chr5 171609760 171609790 -28020360 + (T)n Simple_repeat Simple_repeat 1 30 0 1639 188 60 103 chr5 171610298 171610928 -28019222 - LTR48B LTR ERV1 0 644 1 566 204 7 15 chr5 171611032 171611169 -28018981 - L1MC4a LINE L1 -6 7802 7667 26 30 0 0 chr5 171612481 171612514 -28017636 + AT_rich Low_complexity Low_complexity 1 33 0 1703 42 0 5 chr5 171613527 171613741 -28016409 - L1PA4 LINE L1 -3 6152 5940 1625 110 4 9 chr5 171613758 171613985 -28016165 + AluSx SINE Alu 1 226 -86 8261 55 2 0 chr5 171613988 171614952 -28015198 - LTR5 LTR ERVK -3 966 1 432 126 21 63 chr5 171614952 171615047 -28015103 + AluSx SINE Alu 219 309 0 1285 175 35 0 chr5 171615052 171615280 -28014870 + MER46A DNA MER2_type 1 236 0 309 313 18 9 chr5 171615675 171615787 -28014363 + MIR SINE MIR 1 113 -149 23937 43 9 0 chr5 171617068 171620846 -28009304 + L1PA4 LINE L1 2361 6152 -3 302 331 29 7 chr5 171621359 171621498 -28008652 - L2 LINE L2 -213 3059 2918 2658 97 11 8 chr5 171621784 171622155 -28007995 + THE1C LTR MaLR 1 372 -3 289 216 59 26 chr5 171622371 171622515 -28007635 - MLT1J2 LTR MaLR -312 138 27 267 248 93 62 chr5 171622635 171622925 -28007225 - Tigger7 DNA MER2_type -629 1858 1560 247 186 0 29 chr5 171623914 171623984 -28006166 + (TATATG)n Simple_repeat Simple_repeat 2 69 0 512 248 26 0 chr5 171623988 171624105 -28006045 - MIR SINE MIR -59 203 84 582 297 66 53 chr5 171624367 171624855 -28005295 + L2 LINE L2 1776 2269 -1045 457 199 15 53 chr5 171624921 171625052 -28005098 - MER106A DNA MER1_type -4 232 107 232 256 0 12 chr5 171625062 171625144 -28005006 + (TA)n Simple_repeat Simple_repeat 1 81 0 380 216 0 14 chr5 171625145 171625219 -28004931 - MER106B DNA MER1_type -986 73 1 46 62 0 0 chr5 171625225 171625306 -28004844 + AT_rich Low_complexity Low_complexity 1 81 0 217 136 114 0 chr5 171625540 171625584 -28004566 + L2 LINE L2 3265 3313 0 417 281 124 45 chr5 171626603 171626768 -28003382 + L2 LINE L2 2494 2685 -629 1611 205 30 19 chr5 171626768 171627138 -28003012 - MLT1A2 LTR MaLR 0 374 1 417 281 124 45 chr5 171627138 171627214 -28002936 + L2 LINE L2 2685 2754 -560 2160 132 3 0 chr5 171627304 171627607 -28002543 - AluSg SINE Alu -6 304 1 2415 96 3 0 chr5 171627860 171628172 -28001978 - AluSp SINE Alu 0 313 1 272 284 156 28 chr5 171629512 171629653 -28000497 - MIR3 SINE MIR -11 197 39 394 282 153 24 chr5 171630519 171630689 -27999461 + MIR SINE MIR 65 256 -6 358 343 30 18 chr5 171630780 171630949 -27999201 - MIR SINE MIR -70 192 22 7095 34 0 0 chr5 171633870 171634707 -27995443 + L1PA4 LINE L1 5311 6147 -8 7037 186 49 33 chr5 171635169 171637040 -27993110 - L1PA16 LINE L1 -1 6165 4242 1584 188 3 28 chr5 171637040 171637328 -27992822 + AluJo SINE Alu 1 281 -31 7037 186 49 33 chr5 171637328 171638294 -27991856 - L1PA16 LINE L1 -1924 4242 3293 1665 185 60 103 chr5 171638858 171639488 -27990662 - LTR48B LTR ERV1 0 644 1 566 204 7 15 chr5 171639592 171639729 -27990421 - L1MC4a LINE L1 -6 7802 7667 26 30 0 0 chr5 171641041 171641074 -27989076 + AT_rich Low_complexity Low_complexity 1 33 0 1733 42 0 0 chr5 171642090 171642303 -27987847 - L1PA4 LINE L1 -3 6152 5940 1625 110 4 9 chr5 171642320 171642547 -27987603 + AluSx SINE Alu 1 226 -86 8280 56 1 0 chr5 171642550 171643515 -27986635 - LTR5 LTR ERVK -3 966 1 419 74 11 168 chr5 171643515 171643610 -27986540 - SVA Other Other -450 936 857 56848 3 0 0 chr5 171643610 171650759 -27979391 - HERVK LTR ERVK -95 7148 1 8291 56 1 0 chr5 171650762 171651727 -27978423 - LTR5 LTR ERVK -3 966 1 432 126 21 63 chr5 171651727 171651822 -27978328 + AluSx SINE Alu 222 312 0 1285 175 35 0 chr5 171651827 171652055 -27978095 + MER46A DNA MER2_type 1 236 0 309 313 18 9 chr5 171652450 171652562 -27977588 + MIR SINE MIR 1 113 -149 1228 289 104 69 chr5 171655834 171656111 -27974039 - HAL1 LINE L1 -1386 1121 855 2334 102 0 3 chr5 171656111 171656415 -27973735 - AluSx SINE Alu -9 303 1 1228 289 104 69 chr5 171656415 171656537 -27973613 - HAL1 LINE L1 -1652 855 739 1874 208 56 15 chr5 171656537 171656946 -27973204 - MSTB LTR MaLR 0 426 1 1228 289 104 69 chr5 171656946 171657628 -27972522 - HAL1 LINE L1 -1768 739 1 302 333 35 43 chr5 171657686 171657827 -27972323 + L2 LINE L2 2924 3063 -209 747 261 65 40 chr5 171659899 171660147 -27970003 + MIR SINE MIR 2 256 -6 436 293 60 0 chr5 171661660 171661793 -27968357 - L2 LINE L2 0 3313 3173 315 298 12 50 chr5 171661804 171661965 -27968185 - MIR SINE MIR -5 257 103 4074 43 2 49 chr5 171661989 171662542 -27967608 + L1PA5 LINE L1 5625 6151 -3 661 257 0 55 chr5 171662840 171663023 -27967127 + MER5B DNA MER1_type 1 173 -5 436 263 10 0 chr5 171664114 171664213 -27965937 - MER91B DNA MER1_type -1 189 90 228 204 98 114 chr5 171664230 171664362 -27965788 - MER91B DNA MER1_type -60 130 1 610 289 28 17 chr5 171664960 171665140 -27965010 - MIR3 SINE MIR -9 199 18 302 263 246 18 chr5 171665208 171665322 -27964828 + MIR SINE MIR 15 154 -108 321 237 25 42 chr5 171665686 171665804 -27964346 - LTR28 LTR ERV1 0 1020 905 615 269 112 55 chr5 171665952 171666424 -27963726 - LTR1B LTR ERV1 -298 528 30 336 255 78 20 chr5 171668177 171668279 -27961871 + L2 LINE L2 3200 3307 -6 314 311 38 23 chr5 171668535 171668667 -27961483 + MIR SINE MIR 47 180 -82 422 289 39 26 chr5 171668820 171668976 -27961174 + L2 LINE L2 3156 3313 0 344 326 84 47 chr5 171669239 171669454 -27960696 + L2 LINE L2 2850 3072 -200 878 133 210 15 chr5 171670691 171670886 -27959264 + L1PA13 LINE L1 5926 6158 -5 729 267 42 21 chr5 171670928 171671119 -27959031 - MIR SINE MIR -21 241 47 998 81 40 0 chr5 171672908 171673056 -27957094 - L1PA13 LINE L1 -6 6157 6004 216 194 0 97 chr5 171673193 171673255 -27956895 - MIR SINE MIR -37 225 170 242 324 29 0 chr5 171673288 171673393 -27956757 - LTR67 LTR ERVL -10 547 440 191 344 96 8 chr5 171673674 171673799 -27956351 - MIR SINE MIR -107 155 20 1240 150 22 47 chr5 171673853 171674127 -27956023 + L1MD3 LINE L1 7729 7995 0 881 270 25 21 chr5 171674901 171675138 -27955012 - MIR SINE MIR -10 252 15 198 325 58 32 chr5 171675524 171675678 -27954472 - L2 LINE L2 -1261 2053 1896 2311 116 0 0 chr5 171675766 171676068 -27954082 + AluSx SINE Alu 1 302 -10 521 204 166 0 chr5 171676114 171676271 -27953879 - MER3 DNA MER1_type -21 188 6 1439 194 83 3 chr5 171676285 171676599 -27953551 - MER58B DNA MER1_type -1 340 2 314 267 6 9 chr5 171677079 171677229 -27952921 + MER117 DNA MER1_type 12 197 0 632 137 109 51 chr5 171677310 171677485 -27952665 - L1MC5 LINE L1 -32 7929 7745 202 325 175 0 chr5 171677760 171677920 -27952230 - MIR SINE MIR -12 250 63 207 268 98 12 chr5 171678494 171678576 -27951574 + MIR3 SINE MIR 68 156 -52 411 38 0 0 chr5 171679948 171680001 -27950149 + (TG)n Simple_repeat Simple_repeat 2 54 0 1731 144 127 8 chr5 171680001 171680325 -27949825 + MLT2D LTR ERVL 6 379 -35 771 11 0 0 chr5 171680325 171680413 -27949737 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 1731 144 127 8 chr5 171680413 171680449 -27949701 + MLT2D LTR ERVL 379 409 -5 621 196 49 31 chr5 171680524 171680687 -27949463 - MER58B DNA MER1_type -9 332 167 1955 159 0 0 chr5 171681355 171681651 -27948499 - AluSx SINE Alu -16 296 1 455 0 18 0 chr5 171681750 171681805 -27948345 + (CA)n Simple_repeat Simple_repeat 2 57 0 734 217 12 6 chr5 171681942 171682108 -27948042 + L1MB8 LINE L1 6003 6169 -9 269 362 53 56 chr5 171682213 171682569 -27947581 + L2 LINE L2 2864 3218 -54 531 101 0 0 chr5 171682579 171682658 -27947492 + (TGGA)n Simple_repeat Simple_repeat 1 79 0 298 319 54 60 chr5 171683314 171683499 -27946651 - L3 LINE CR1 -21 1556 1373 503 314 109 22 chr5 171683504 171683682 -27946468 + MIR SINE MIR 8 212 -50 369 0 0 0 chr5 171683682 171683723 -27946427 + (CA)n Simple_repeat Simple_repeat 2 42 0 503 314 109 22 chr5 171683723 171683773 -27946377 + MIR SINE MIR 212 256 -6 1600 316 50 23 chr5 171684895 171685504 -27944646 + L2 LINE L2 1075 1705 -1609 1929 177 3 0 chr5 171685504 171685814 -27944336 + AluJo SINE Alu 2 312 0 1600 316 50 23 chr5 171685814 171685869 -27944281 + L2 LINE L2 1705 1757 -1557 1115 292 159 10 chr5 171685875 171686126 -27944024 + L2 LINE L2 2179 2391 -923 180 0 0 0 chr5 171686126 171686146 -27944004 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1115 292 159 10 chr5 171686146 171686390 -27943760 + L2 LINE L2 2391 2748 -566 230 358 56 25 chr5 171686397 171686559 -27943591 - L2 LINE L2 -454 2860 2694 25 0 0 0 chr5 171687532 171687557 -27942593 + AT_rich Low_complexity Low_complexity 1 25 0 2198 209 23 21 chr5 171687577 171688089 -27942061 + LTR40a LTR ERVL 4 516 -3 213 132 0 0 chr5 171688206 171688244 -27941906 + (T)n Simple_repeat Simple_repeat 1 38 0 266 288 12 25 chr5 171688460 171688540 -27941610 - L2 LINE L2 0 3272 3194 867 359 37 19 chr5 171688951 171689414 -27940736 - MLT1K LTR MaLR -115 473 3 364 291 8 24 chr5 171690193 171690320 -27939830 + MLT1I LTR MaLR 102 226 -183 24 0 0 0 chr5 171692016 171692040 -27938110 + AT_rich Low_complexity Low_complexity 1 24 0 255 325 167 17 chr5 171692634 171692754 -27937396 + MIR3 SINE MIR 20 157 -51 696 249 152 18 chr5 171692757 171693099 -27937051 - MER113 DNA MER1_type? 0 521 134 752 230 74 108 chr5 171693599 171694043 -27936107 - MER34B LTR ERV1 -130 412 1 4603 146 68 7 chr5 171695250 171696093 -27934057 - MER4D LTR ERV1 -9 894 1 3844 93 34 0 chr5 171696573 171697109 -27933041 - MER41A LTR ERV1 0 554 1 402 302 122 28 chr5 171697612 171697867 -27932283 + L2 LINE L2 3031 3309 -4 1303 157 109 134 chr5 171698076 171698636 -27931514 - LTR49 LTR ERV1 -49 546 1 2940 204 22 28 chr5 171698897 171699540 -27930610 - MER82 DNA MER2_type -8 645 7 701 305 30 13 chr5 171700440 171700673 -27929477 + MIR SINE MIR 5 241 -21 230 225 135 22 chr5 171701100 171701189 -27928961 - MIR SINE MIR -54 208 110 460 231 88 54 chr5 171701334 171701481 -27928669 + MIR SINE MIR 111 262 0 1876 194 26 34 chr5 171702335 171702803 -27927347 + MER74A LTR ERVL 5 468 -90 190 363 121 0 chr5 171702992 171703083 -27927067 + L2 LINE L2 3133 3234 -38 291 284 32 32 chr5 171703255 171703350 -27926800 + MIR SINE MIR 57 151 -111 934 99 0 8 chr5 171703350 171703481 -27926669 + FLAM_C SINE Alu 1 130 -3 183 234 64 0 chr5 171703496 171703543 -27926607 + MIR SINE MIR 140 189 -73 976 147 5 87 chr5 171703543 171703727 -27926423 + AluJo SINE Alu 5 173 -139 22 0 0 0 chr5 171703728 171703750 -27926400 + AT_rich Low_complexity Low_complexity 1 22 0 259 367 8 8 chr5 171703766 171703894 -27926256 + L2 LINE L2 2924 3051 -221 1376 187 20 85 chr5 171703958 171704348 -27925802 - MLT2D LTR ERVL -47 367 3 685 311 109 14 chr5 171705109 171705502 -27924648 - L2 LINE L2 -166 3147 2719 2214 241 247 22 chr5 171705669 171706754 -27923396 - L2 LINE L2 -621 2693 1365 402 307 208 13 chr5 171707485 171707716 -27922434 - L3 LINE CR1 -9 1568 1293 180 343 15 0 chr5 171708147 171708214 -27921936 - L2 LINE L2 -14 3258 3191 768 295 55 53 chr5 171708221 171708704 -27921446 - L2 LINE L2 0 3313 2719 258 32 0 0 chr5 171708704 171708735 -27921415 + (TG)n Simple_repeat Simple_repeat 1 31 0 768 295 55 53 chr5 171708735 171708981 -27921169 - L2 LINE L2 -594 2719 2475 2364 79 0 10 chr5 171709178 171709482 -27920668 + AluY SINE Alu 3 303 -8 386 293 77 28 chr5 171709889 171710070 -27920080 - L2 LINE L2 -876 2438 2249 236 184 237 13 chr5 171710133 171710209 -27919941 + L3 LINE CR1 1480 1572 -5 578 256 15 7 chr5 171711663 171711800 -27918350 + MIR SINE MIR 23 160 -102 1677 138 135 10 chr5 171711899 171712284 -27917866 - MER31A LTR ERV1 -52 433 1 493 266 8 0 chr5 171712827 171712951 -27917199 - MIR SINE MIR -32 230 106 1570 114 18 0 chr5 171713164 171713391 -27916759 + AluSg/x SINE Alu 82 312 0 344 333 9 0 chr5 171714321 171714432 -27915718 + MIR SINE MIR 141 252 -10 15881 176 94 15 chr5 171715079 171721111 -27909039 - L1PA13 LINE L1 -3 7598 5 293 289 99 26 chr5 171721444 171721596 -27908554 + MIR SINE MIR 18 180 -82 21 36 0 0 chr5 171721946 171721974 -27908176 + AT_rich Low_complexity Low_complexity 1 28 0 303 250 216 9 chr5 171722129 171722245 -27907905 + MIR SINE MIR 18 157 -105 216 254 51 76 chr5 171722639 171722757 -27907393 - MIR3 SINE MIR -7 201 87 198 376 74 30 chr5 171723633 171723835 -27906315 - MIR SINE MIR -49 213 3 253 266 54 118 chr5 171723988 171724191 -27905959 + L3 LINE CR1 930 1119 -458 198 246 110 51 chr5 171724622 171724740 -27905410 + MIR3 SINE MIR 36 160 -48 240 191 132 0 chr5 171725627 171725695 -27904455 - MER5B DNA MER1_type -75 103 27 2437 79 0 3 chr5 171726730 171727033 -27903117 - AluY SINE Alu -9 302 1 220 280 65 11 chr5 171727330 171727423 -27902727 + L2 LINE L2 2565 2662 -652 1330 239 107 23 chr5 171727443 171727884 -27902266 - MLT2B2 LTR ERVL -20 534 1 2351 99 3 3 chr5 171727966 171728269 -27901881 - AluSq SINE Alu -10 303 1 682 148 61 9 chr5 171728900 171729015 -27901135 + FLAM_A SINE Alu 1 121 -12 572 286 84 5 chr5 171729049 171729333 -27900817 + MLT2F LTR ERVL 10 339 -324 * 846 218 36 30 chr5 171729326 171729571 -27900579 + MLT2F LTR ERVL 176 655 -8 790 291 65 75 chr5 171729914 171730743 -27899407 + L1ME2 LINE L1 246 1066 -5053 603 325 59 55 chr5 171730773 171731280 -27898870 + L1ME2 LINE L1 1121 1630 -4500 1557 253 68 20 chr5 171731410 171732123 -27898027 + L1ME2 LINE L1 4798 5593 -554 1512 269 61 31 chr5 171732123 171732699 -27897451 - MLT1E LTR MaLR 0 593 1 1557 253 68 20 chr5 171732699 171732917 -27897233 + L1ME2 LINE L1 5593 5799 -348 326 222 0 0 chr5 171733018 171733109 -27897041 + L1ME2 LINE L1 6056 6146 -3 770 268 148 56 chr5 171733151 171733530 -27896620 + L1MEd LINE L1 2236 2579 -3550 1724 139 105 0 chr5 171733530 171733797 -27896353 - AluSx SINE Alu -15 297 3 770 268 148 56 chr5 171733797 171734274 -27895876 + L1MEd LINE L1 2579 3262 -2867 21 0 0 0 chr5 171734319 171734340 -27895810 + AT_rich Low_complexity Low_complexity 1 21 0 726 273 55 49 chr5 171734627 171735121 -27895029 + L1MEd LINE L1 3648 4144 -1985 1664 122 153 0 chr5 171735139 171735401 -27894749 + AluSq SINE Alu 2 303 0 839 277 124 31 chr5 171735690 171736902 -27893248 + L1MEd LINE L1 4557 5884 -269 2101 122 3 3 chr5 171737124 171737427 -27892723 - AluSx SINE Alu -9 303 1 24 0 0 0 chr5 171737448 171737472 -27892678 + AT_rich Low_complexity Low_complexity 1 24 0 962 140 50 11 chr5 171737758 171737937 -27892213 + MER5A DNA MER1_type 3 188 -1 2558 86 24 16 chr5 171738258 171738630 -27891520 - THE1C LTR MaLR 0 375 1 516 273 75 12 chr5 171739351 171739512 -27890638 + MIR SINE MIR 31 201 -61 1695 184 27 10 chr5 171741003 171741296 -27888854 + AluJo SINE Alu 5 302 -10 408 187 187 30 chr5 171741444 171741610 -27888540 - L1ME1 LINE L1 -21 6145 5954 248 248 46 118 chr5 171741698 171741907 -27888243 - MIR SINE MIR 0 262 2 243 0 0 0 chr5 171742000 171742027 -27888123 + (A)n Simple_repeat Simple_repeat 1 27 0 353 243 103 0 chr5 171743556 171743692 -27886458 - MER103 DNA DNA -16 150 1 375 297 45 9 chr5 171743757 171743868 -27886282 + L2 LINE L2 3191 3305 -8 207 204 0 0 chr5 171744233 171744287 -27885863 + (TG)n Simple_repeat Simple_repeat 1 54 0 228 100 0 0 chr5 171744288 171744328 -27885822 + (TA)n Simple_repeat Simple_repeat 2 41 0 900 271 28 0 chr5 171747336 171747554 -27882596 + MER58A DNA MER1_type 1 224 0 749 243 146 4 chr5 171750337 171750563 -27879587 - MIR SINE MIR 0 262 5 299 216 95 0 chr5 171751227 171751301 -27878849 - MER117 DNA MER1_type -110 87 7 180 0 0 0 chr5 171752263 171752283 -27877867 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr5 171752485 171752513 -27877637 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 171752527 171752550 -27877600 + AT_rich Low_complexity Low_complexity 1 23 0 186 289 87 67 chr5 171752563 171752712 -27877438 + L2 LINE L2 2454 2605 -709 207 0 0 0 chr5 171753703 171753726 -27876424 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 246 323 63 24 chr5 171755990 171756104 -27874046 + L2 LINE L2 2932 3053 -219 2540 40 0 0 chr5 171756104 171756401 -27873749 + AluY SINE Alu 1 297 -14 246 323 63 24 chr5 171756401 171756413 -27873737 + L2 LINE L2 3053 3063 -209 1963 148 0 16 chr5 171757267 171757570 -27872580 - AluSx SINE Alu -14 298 1 341 274 108 19 chr5 171758031 171758188 -27871962 - MIR SINE MIR -28 234 64 236 257 103 80 chr5 171758288 171758588 -27871562 + L1ME LINE L1 5550 5856 -265 1538 202 53 12 chr5 171759025 171759367 -27870783 - MLT1A1 LTR MaLR 0 365 10 2715 84 14 3 chr5 171760493 171760864 -27869286 - THE1C LTR MaLR 0 375 1 1939 143 7 3 chr5 171761205 171761498 -27868652 - AluJb SINE Alu -18 294 1 230 277 0 0 chr5 171761703 171761768 -27868382 + MLT1L LTR MaLR 1 65 -550 353 132 0 0 chr5 171762109 171762162 -27867988 + MSTC LTR MaLR 1 53 -375 686 173 173 0 chr5 171762222 171762361 -27867789 + MSTC LTR MaLR 50 212 -216 799 131 0 78 chr5 171762371 171762524 -27867626 + FRAM SINE Alu 1 40 0 206 61 0 30 chr5 171762529 171762562 -27867588 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 1142 149 44 48 chr5 171762566 171762794 -27867356 + MSTC LTR MaLR 197 423 -5 222 371 31 0 chr5 171763008 171763105 -27867045 - MIR SINE MIR -120 142 43 287 241 121 24 chr5 171763243 171763326 -27866824 + MIR3 SINE MIR 112 202 -6 465 281 281 17 chr5 171763391 171763686 -27866464 - L2 LINE L2 0 3313 2941 2175 88 6 50 chr5 171764882 171765199 -27864951 + AluSg SINE Alu 1 303 -7 227 322 97 52 chr5 171765251 171765540 -27864610 + L1MEd LINE L1 901 1202 -4917 22 0 0 0 chr5 171766059 171766081 -27864069 + AT_rich Low_complexity Low_complexity 1 22 0 315 342 8 0 chr5 171766105 171766222 -27863928 - L1MC4 LINE L1 -1339 6703 6586 213 267 0 0 chr5 171766233 171766278 -27863872 + (TA)n Simple_repeat Simple_repeat 1 45 0 326 292 11 0 chr5 171766278 171766367 -27863783 - L1MC4 LINE L1 -1339 6703 6614 195 129 0 0 chr5 171766371 171766402 -27863748 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 668 280 48 44 chr5 171766409 171766930 -27863220 + L1MEd LINE L1 2208 2730 -3399 363 62 31 16 chr5 171766963 171767027 -27863123 + (TA)n Simple_repeat Simple_repeat 1 65 0 996 83 14 7 chr5 171767132 171767277 -27862873 - L1PA13 LINE L1 -11 6152 6007 944 174 5 38 chr5 171767277 171767489 -27862661 - L1P LINE L1 -987 5159 4955 245 139 0 0 chr5 171767552 171767588 -27862562 + L1M4 LINE L1 4904 4939 -1207 35140 100 15 13 chr5 171767601 171773723 -27856427 + L1PA6 LINE L1 2 6136 -18 198 0 0 0 chr5 171773724 171773746 -27856404 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 327 49 0 0 chr5 171773745 171773786 -27856364 + (CA)n Simple_repeat Simple_repeat 2 42 0 13547 78 3 6 chr5 171773787 171776408 -27853742 + L1PA6 LINE L1 3515 6147 -7 1535 178 38 48 chr5 171776419 171777057 -27853093 + L1M4 LINE L1 4957 5591 -587 8345 117 18 11 chr5 171777076 171778306 -27851844 + HSMAR1 DNA Mariner 46 1284 -3 2012 113 33 0 chr5 171778351 171778626 -27851524 + AluSx SINE Alu 2 285 -27 228 249 91 70 chr5 171778679 171778920 -27851230 + L1M3 LINE L1 5258 5503 -677 1926 143 10 10 chr5 171780669 171780970 -27849180 + AluSx SINE Alu 4 304 -8 338 185 12 0 chr5 171781008 171781089 -27849061 + GA-rich Low_complexity Low_complexity 1 82 0 359 308 96 35 chr5 171781388 171781586 -27848564 + MLT1K LTR MaLR 76 285 -303 180 0 0 0 chr5 171781693 171781713 -27848437 + (A)n Simple_repeat Simple_repeat 1 20 0 186 369 73 45 chr5 171782256 171782611 -27847539 + L2 LINE L2 2830 3194 -78 317 103 35 17 chr5 171782758 171782816 -27847334 - MER110A LTR ERV1 -2 466 408 35 24 0 0 chr5 171782820 171782862 -27847288 + AT_rich Low_complexity Low_complexity 1 42 0 1110 221 86 14 chr5 171782898 171783178 -27846972 - LTR49 LTR ERV1 -25 570 271 1192 138 0 10 chr5 171783252 171783448 -27846702 + L1PA8 LINE L1 5979 6172 0 609 123 9 9 chr5 171783454 171783560 -27846590 - LTR49 LTR ERV1 -489 106 1 316 218 13 0 chr5 171783560 171783638 -27846512 - MER110A LTR ERV1 -365 103 25 301 295 144 0 chr5 171783979 171784118 -27846032 + MER117 DNA MER1_type 1 159 -38 183 28 83 0 chr5 171784346 171784382 -27845768 + T-rich Low_complexity Low_complexity 2 40 0 964 132 0 0 chr5 171784409 171784538 -27845612 - AluJb SINE Alu -181 131 3 240 258 58 58 chr5 171784634 171784754 -27845396 + MLT1K LTR MaLR 177 296 -292 1075 63 0 0 chr5 171784755 171784897 -27845253 + L1PA4 LINE L1 6012 6153 -2 27 0 0 0 chr5 171784897 171784924 -27845226 + AT_rich Low_complexity Low_complexity 1 27 0 347 125 54 0 chr5 171785176 171785232 -27844918 + MLT1K LTR MaLR 481 539 -49 1182 164 21 125 chr5 171785519 171785855 -27844295 - MER4C LTR ERV1 0 465 165 751 167 107 71 chr5 171785824 171786132 -27844018 - MER4C LTR ERV1 -316 348 1 * 300 297 95 74 chr5 171788123 171788298 -27841852 - MIR SINE MIR -60 148 14 29 0 0 0 chr5 171838720 171838749 -27791401 + AT_rich Low_complexity Low_complexity 1 29 0 3608 205 39 5 chr5 171839718 171840768 -27789382 + L1M1 LINE L1 3384 4472 -3093 23 0 0 0 chr5 171842302 171842325 -27787825 + AT_rich Low_complexity Low_complexity 1 23 0 1638 152 0 53 chr5 171842546 171842829 -27787321 + AluJb SINE Alu 9 276 -36 5715 168 45 31 chr5 171843355 171844662 -27785488 + L1M1 LINE L1 4546 5870 -1695 999 223 13 9 chr5 171844663 171844887 -27785263 - MER82 DNA MER2_type -427 226 2 197 159 23 0 chr5 171844887 171844931 -27785219 + (TA)n Simple_repeat Simple_repeat 1 45 0 643 210 42 0 chr5 171844945 171845088 -27785062 - Charlie1a DNA MER1_type -1230 225 77 1874 155 10 0 chr5 171845160 171845456 -27784694 + AluSx SINE Alu 3 301 -11 297 344 26 11 chr5 171845875 171846064 -27784086 + HAL1b LINE L1 422 613 -735 207 0 0 0 chr5 171846097 171846120 -27784030 + (CAG)n Simple_repeat Simple_repeat 1 23 0 2035 142 10 0 chr5 171846153 171846456 -27783694 + AluSx SINE Alu 1 306 -6 207 250 0 0 chr5 171846456 171846500 -27783650 + MER5A DNA MER1_type 66 109 -80 231 253 134 35 chr5 171846912 171847114 -27783036 + L1P LINE L1 2202 2423 -3723 830 125 0 31 chr5 171847650 171847778 -27782372 + AluJb SINE Alu 1 124 -188 309 204 204 0 chr5 171848042 171848204 -27781946 - L2 LINE L2 -260 3053 2859 3566 108 35 73 chr5 171848576 171849064 -27781086 + MER39B LTR ERV1 1 506 -147 2361 80 0 49 chr5 171849064 171849391 -27780759 + AluY SINE Alu 1 311 0 3566 108 35 73 chr5 171849391 171849490 -27780660 + MER39B LTR ERV1 506 563 -90 1136 162 162 70 chr5 171849490 171849761 -27780389 + AluJo SINE Alu 2 297 -5 3566 108 35 73 chr5 171849761 171849829 -27780321 + MER39B LTR ERV1 563 632 -21 199 310 162 95 chr5 171849910 171850194 -27779956 - L2 LINE L2 -1 3271 2969 1784 100 12 0 chr5 171850313 171850562 -27779588 - AluSp SINE Alu -3 310 59 372 297 27 0 chr5 171850841 171850952 -27779198 - L3b LINE CR1 -140 1443 1330 263 268 78 36 chr5 171851337 171851457 -27778693 + MIR3 SINE MIR 56 179 -29 351 233 216 0 chr5 171851918 171852034 -27778116 + Charlie8 DNA MER1_type 28 168 -2249 1820 171 0 16 chr5 171854816 171855132 -27775018 + AluJo SINE Alu 1 311 -1 535 232 53 34 chr5 171855206 171855413 -27774737 + HAL1b LINE L1 603 813 -535 280 179 74 21 chr5 171855427 171855522 -27774628 + HAL1b LINE L1 879 978 -370 290 235 111 0 chr5 171855532 171855613 -27774537 - L2 LINE L2 -15 3257 3168 293 250 87 0 chr5 171855719 171855811 -27774339 - MIR SINE MIR -38 224 125 242 200 157 0 chr5 171855812 171855882 -27774268 + HAL1b LINE L1 1014 1094 -254 189 107 0 0 chr5 171855933 171855961 -27774189 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 5562 152 11 8 chr5 171856000 171856970 -27773180 + L1PA13 LINE L1 4391 5363 -783 928 76 0 8 chr5 171856973 171857092 -27773058 + AluSc SINE Alu 172 289 -20 5768 97 4 6 chr5 171857093 171857900 -27772250 + L1PA13 LINE L1 5359 6163 0 1244 285 67 25 chr5 171857968 171858445 -27771705 + MLT1J LTR MaLR 15 511 0 189 316 95 11 chr5 171859041 171859136 -27771014 - L2 LINE L2 -3 3310 3208 465 301 42 0 chr5 171859639 171859826 -27770324 + L1ME LINE L1 5474 5664 -457 846 175 69 26 chr5 171859828 171860017 -27770133 + AluJo SINE Alu 1 197 -115 1868 156 7 13 chr5 171860200 171860507 -27769643 + AluJb SINE Alu 1 305 -7 208 269 0 0 chr5 171860526 171860578 -27769572 + (TA)n Simple_repeat Simple_repeat 1 52 0 1253 234 56 1 chr5 171861208 171861575 -27768575 + L1MA7 LINE L1 5902 6291 0 249 159 0 0 chr5 171861670 171861714 -27768436 + (CA)n Simple_repeat Simple_repeat 2 45 0 2183 139 3 0 chr5 171861719 171862028 -27768122 - AluSx SINE Alu -2 310 1 316 271 101 50 chr5 171862162 171862361 -27767789 + MLT1J LTR MaLR 303 511 0 1214 278 58 34 chr5 171862681 171863474 -27766676 + L2 LINE L2 2478 3284 -29 2209 97 28 0 chr5 171863909 171864198 -27765952 - AluSq SINE Alu -8 305 9 583 140 61 0 chr5 171864596 171864710 -27765440 + L1MC3 LINE L1 5857 5977 -1808 469 104 52 0 chr5 171864710 171864785 -27765365 + L1MB4 LINE L1 6093 6173 -7 1228 174 12 111 chr5 171864785 171865118 -27765032 - AluJo SINE Alu -12 300 1 24 32 0 0 chr5 171865393 171865424 -27764726 + AT_rich Low_complexity Low_complexity 1 31 0 410 261 74 28 chr5 171865524 171865700 -27764450 + L1 LINE L1 3086 3269 -2877 746 207 0 0 chr5 171865741 171865862 -27764288 + AluJb SINE Alu 12 132 -180 189 74 0 0 chr5 171866351 171866378 -27763772 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 1758 189 0 0 chr5 171866515 171866816 -27763334 + AluJb SINE Alu 1 301 -11 511 234 102 12 chr5 171866923 171867090 -27763060 - L2 LINE L2 -211 3102 2921 1211 209 58 36 chr5 171868027 171868349 -27761801 - AluJo SINE Alu 0 328 1 1158 278 81 30 chr5 171868365 171868898 -27761252 + L1MC4a LINE L1 5351 5910 -1898 294 366 0 11 chr5 171868997 171869090 -27761060 - MIR SINE MIR -166 96 5 3827 125 77 27 chr5 171869611 171869665 -27760485 - MER39B LTR ERV1 0 653 603 1721 161 29 14 chr5 171869665 171869974 -27760176 + AluJo SINE Alu 1 313 0 3827 125 77 27 chr5 171869974 171870540 -27759610 - MER39B LTR ERV1 -50 603 1 241 200 18 0 chr5 171871018 171871073 -27759077 + MLT1L LTR MaLR 23 78 -537 756 274 52 49 chr5 171871095 171871424 -27758726 + MLT1J LTR MaLR 109 438 -73 2625 144 36 7 chr5 171871428 171871844 -27758306 + MSTA LTR MaLR 1 428 0 2173 109 0 0 chr5 171872078 171872411 -27757739 + AluY SINE Alu 1 333 0 469 247 84 57 chr5 171872696 171872923 -27757227 - MIR SINE MIR -12 250 18 237 275 29 14 chr5 171873337 171873406 -27756744 + MLT1A2-int LTR MaLR 1040 1109 -262 408 264 130 59 chr5 171873798 171874037 -27756113 + L1MEd LINE L1 551 806 -5313 1323 154 29 52 chr5 171874253 171874337 -27755813 + L1MC2 LINE L1 6070 6154 -190 1941 137 3 3 chr5 171874337 171874665 -27755485 + AluJb SINE Alu 1 328 0 1323 154 29 52 chr5 171874665 171874851 -27755299 + L1MC2 LINE L1 6154 6335 -9 966 293 119 29 chr5 171875854 171876521 -27753629 - L2 LINE L2 -7 3306 2580 201 275 12 75 chr5 171876579 171876659 -27753491 + MER91 DNA MER1_type 66 140 -56 410 270 116 42 chr5 171876744 171876985 -27753165 - L2 LINE L2 -741 2573 2315 863 160 0 0 chr5 171877635 171877760 -27752390 - FLAM_C SINE Alu -18 125 1 326 223 117 11 chr5 171877969 171878063 -27752087 + MIR SINE MIR 45 148 -60 353 255 71 0 chr5 171878339 171878437 -27751713 - MIR3 SINE MIR -27 181 77 240 273 0 0 chr5 171878435 171878490 -27751660 + MIR3 SINE MIR 108 162 -46 * 475 271 49 14 chr5 171878968 171879112 -27751038 - MLT1J LTR MaLR -44 467 319 3950 282 112 20 chr5 171879343 171880662 -27749488 - L2 LINE L2 -913 2401 924 1940 136 65 46 chr5 171880662 171881029 -27749121 - THE1C LTR MaLR -1 374 1 3950 282 112 20 chr5 171881029 171881221 -27748929 - L2 LINE L2 -2390 924 751 1525 193 65 24 chr5 171881486 171881823 -27748327 + MLT1A2 LTR MaLR 23 373 -1 233 133 44 22 chr5 171881824 171881869 -27748281 + L2 LINE L2 776 821 -2493 310 335 90 7 chr5 171881982 171882137 -27748013 + MIR SINE MIR 47 214 -48 1874 149 21 3 chr5 171882145 171882434 -27747716 - AluSx SINE Alu -18 294 1 1529 174 3 28 chr5 171882487 171882769 -27747381 + AluJo SINE Alu 1 275 -37 555 66 0 0 chr5 171882769 171882845 -27747305 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 218 200 75 100 chr5 171882892 171882926 -27747224 + MIR SINE MIR 170 203 -59 1150 219 23 0 chr5 171882926 171883145 -27747005 + MER58A DNA MER1_type 1 224 0 218 200 75 100 chr5 171883145 171883190 -27746960 + MIR SINE MIR 203 247 -15 6138 195 43 31 chr5 171883563 171884662 -27745488 + L1M4 LINE L1 88 1172 -5112 1471 193 62 0 chr5 171884662 171884779 -27745371 + AluJb SINE Alu 1 109 -203 531 31 0 0 chr5 171884779 171884844 -27745306 + (CA)n Simple_repeat Simple_repeat 2 66 0 1471 193 62 0 chr5 171884844 171885054 -27745096 + AluJb SINE Alu 109 312 0 6138 195 43 31 chr5 171885054 171885065 -27745085 + L1M4 LINE L1 1172 1181 -5103 1643 169 0 4 chr5 171885065 171885331 -27744819 + AluSx SINE Alu 37 301 -11 6138 195 43 31 chr5 171885331 171885903 -27744247 + L1M4 LINE L1 1181 1745 -4539 2197 128 3 0 chr5 171885903 171886199 -27743951 - AluSx SINE Alu -10 302 6 6138 195 43 31 chr5 171886199 171886225 -27743925 + L1M4 LINE L1 1745 1769 -4515 183 80 0 0 chr5 171886225 171886250 -27743900 + (CCA)n Simple_repeat Simple_repeat 1 25 0 6138 195 43 31 chr5 171886250 171886585 -27743565 + L1M4 LINE L1 1769 2152 -4132 297 261 43 117 chr5 171888087 171888547 -27741603 + L1MEd LINE L1 701 1126 -4993 305 281 179 19 chr5 171888606 171888869 -27741281 + L1M4 LINE L1 4047 4351 -1977 1575 260 125 52 chr5 171888873 171889639 -27740511 + L1MC4 LINE L1 6711 7532 -510 7503 46 16 0 chr5 171889658 171890955 -27739195 - L1PA7 LINE L1 -2 6152 4845 2598 101 44 0 chr5 171890955 171891342 -27738808 + L1PA7 LINE L1 4459 4862 -1284 1119 188 15 70 chr5 171891386 171891618 -27738532 + L1MD3 LINE L1 7730 7946 -49 1871 169 3 0 chr5 171891618 171891913 -27738237 - AluSx SINE Alu -16 296 1 1119 188 15 70 chr5 171891913 171891952 -27738198 + L1MD3 LINE L1 7946 7986 -9 855 259 70 4 chr5 171891987 171892257 -27737893 + L1MC4 LINE L1 7563 7850 -192 615 249 31 67 chr5 171892344 171892569 -27737581 - MER21A LTR ERV1 -137 794 578 1079 170 62 5 chr5 171892590 171892784 -27737366 - MER2 DNA MER2_type -139 206 2 806 260 28 108 chr5 171892807 171893272 -27736878 - MER21B LTR ERV1 -415 448 21 292 346 13 13 chr5 171893758 171893911 -27736239 + L1M4 LINE L1 4823 4975 -1353 811 258 93 16 chr5 171893931 171894179 -27735971 - MLT1L LTR MaLR 0 615 349 231 255 0 0 chr5 171894297 171894348 -27735802 - MLT1L LTR MaLR -423 192 142 285 327 173 0 chr5 171894553 171894721 -27735429 - MIR SINE MIR -6 256 60 507 242 8 183 chr5 171896084 171896187 -27733963 - MIR SINE MIR -7 255 167 303 109 0 0 chr5 171896187 171896233 -27733917 + MADE1 DNA Mariner 35 80 0 507 242 8 183 chr5 171896233 171896336 -27733814 - MIR SINE MIR -95 167 48 188 278 84 89 chr5 171896452 171896643 -27733507 + MIR SINE MIR 31 220 -42 2348 112 0 0 chr5 171896853 171897165 -27732985 + AluSx SINE Alu 1 312 0 24 32 0 0 chr5 171897735 171897766 -27732384 + AT_rich Low_complexity Low_complexity 1 31 0 2167 95 3 0 chr5 171897817 171898123 -27732027 + AluY SINE Alu 2 308 0 639 294 68 35 chr5 171898377 171898970 -27731180 - L2 LINE L2 -74 3239 2628 937 246 30 0 chr5 171898972 171899175 -27730975 + MER58A DNA MER1_type 1 209 -15 205 233 23 0 chr5 171899246 171899289 -27730861 - L2 LINE L2 -3 3310 3267 288 273 116 97 chr5 171899632 171900046 -27730104 + MLT1K LTR MaLR 157 578 -10 2846 152 113 14 chr5 171900146 171900659 -27729491 + MER34B LTR ERV1 1 564 -1 193 284 230 0 chr5 171900841 171900915 -27729235 + MIR3 SINE MIR 66 156 -52 1583 172 44 27 chr5 171901396 171901693 -27728457 + AluJo SINE Alu 1 302 -10 355 261 94 57 chr5 171901786 171901982 -27728168 - MER20 DNA MER1_type 0 219 15 335 326 23 23 chr5 171901990 171902122 -27728028 - MIR SINE MIR -61 147 16 181 54 0 54 chr5 171904018 171904055 -27726095 + (CAA)n Simple_repeat Simple_repeat 2 36 0 270 0 0 0 chr5 171904185 171904215 -27725935 + (TG)n Simple_repeat Simple_repeat 2 31 0 198 0 0 0 chr5 171904613 171904635 -27725515 + (T)n Simple_repeat Simple_repeat 1 22 0 1461 194 0 35 chr5 171904709 171904992 -27725158 + AluJo SINE Alu 1 273 -39 238 214 86 57 chr5 171904992 171905012 -27725138 + AluYb8 SINE Alu 119 140 -168 2015 122 22 19 chr5 171905012 171905323 -27724827 + AluSx SINE Alu 1 312 0 1332 172 228 0 chr5 171905332 171905600 -27724550 + LTR69 LTR ERVL 34 362 -226 2660 78 33 11 chr5 171905600 171905960 -27724190 + L1PA11 LINE L1 5807 6174 0 196 274 131 70 chr5 171906116 171906444 -27723706 - L2 LINE L2 -423 2891 2544 296 304 69 10 chr5 171907211 171907415 -27722735 + L1MC4a LINE L1 5722 5937 -1871 2090 121 0 32 chr5 171907998 171908312 -27721838 + AluSx SINE Alu 1 304 -8 311 205 231 17 chr5 171908642 171908759 -27721391 + MER5A DNA MER1_type 40 181 -8 188 264 11 55 chr5 171909065 171909156 -27720994 + MIR3 SINE MIR 95 181 -27 219 356 163 9 chr5 171909599 171909832 -27720318 - L3 LINE CR1 -8 1569 1301 2324 84 3 0 chr5 171909914 171910212 -27719938 - AluY SINE Alu -12 299 1 727 289 66 0 chr5 171911361 171911603 -27718547 + MIR SINE MIR 4 261 -1 1955 158 26 3 chr5 171911941 171912244 -27717906 - AluSx SINE Alu -2 310 1 1950 118 4 4 chr5 171912527 171912797 -27717353 + AluSp SINE Alu 1 270 -43 222 352 64 8 chr5 171912906 171913031 -27717119 - L3 LINE CR1 -19 1558 1427 639 255 125 82 chr5 171913035 171913451 -27716699 - MLT1K LTR MaLR -4 584 151 2159 108 0 65 chr5 171913525 171913850 -27716300 + AluSx SINE Alu 1 304 -8 527 276 21 7 chr5 171913962 171914107 -27716043 - L3 LINE CR1 -228 1349 1203 1674 177 47 7 chr5 171914194 171914493 -27715657 - AluJb SINE Alu -1 311 1 28 0 0 0 chr5 171914563 171914591 -27715559 + AT_rich Low_complexity Low_complexity 1 28 0 32 43 0 0 chr5 171914713 171914759 -27715391 + AT_rich Low_complexity Low_complexity 1 46 0 300 292 29 81 chr5 171915109 171915318 -27714832 + L1MC4a LINE L1 596 793 -5326 4562 175 29 62 chr5 171915520 171915574 -27714576 + L1MB4 LINE L1 4918 4972 -1208 387 0 0 0 chr5 171915574 171915617 -27714533 + (TG)n Simple_repeat Simple_repeat 2 44 0 2144 109 3 30 chr5 171915619 171915922 -27714228 - AluSx SINE Alu -17 295 1 4562 175 29 62 chr5 171915922 171916482 -27713668 + L1MB4 LINE L1 4973 5550 -630 2112 142 6 10 chr5 171916482 171916793 -27713357 + AluSx SINE Alu 3 312 0 4562 175 29 62 chr5 171916793 171917465 -27712685 + L1MB4 LINE L1 5550 6153 -27 1134 271 106 46 chr5 171917524 171917714 -27712436 + L1MC4a LINE L1 895 1072 -5238 1708 160 45 4 chr5 171917714 171917982 -27712168 + AluSx SINE Alu 2 280 -32 1037 77 24 12 chr5 171917982 171918152 -27711998 + (GAAA)n Simple_repeat Simple_repeat 3 174 0 1134 271 106 46 chr5 171918152 171918639 -27711511 + L1MC4a LINE L1 1072 1529 -4781 1885 185 0 0 chr5 171918639 171918947 -27711203 + AluJb SINE Alu 5 312 0 1134 271 106 46 chr5 171918947 171919079 -27711071 + L1MC4a LINE L1 1529 1652 -4658 2630 42 3 6 chr5 171919079 171919391 -27710759 + AluY SINE Alu 1 311 0 1134 271 106 46 chr5 171919391 171919831 -27710319 + L1MC4a LINE L1 1652 2262 -4048 634 283 91 66 chr5 171919827 171920311 -27709839 + L1MC4a LINE L1 5493 5988 -1803 * 2039 114 32 41 chr5 171920493 171920808 -27709342 + AluSx SINE Alu 1 312 0 222 62 0 0 chr5 171920870 171920902 -27709248 + (CA)n Simple_repeat Simple_repeat 2 33 0 356 78 20 0 chr5 171921269 171921320 -27708830 + AluSp/q SINE Alu 154 205 -98 224 326 39 47 chr5 171921350 171921375 -27708775 + L3 LINE CR1 884 908 -669 1444 184 69 24 chr5 171921375 171921663 -27708487 - AluJo SINE Alu -11 301 1 224 326 39 47 chr5 171921663 171921766 -27708384 + L3 LINE CR1 908 1011 -566 779 185 0 23 chr5 171921824 171921954 -27708196 + FLAM_C SINE Alu 1 127 -6 894 219 15 15 chr5 171921974 171922179 -27707971 - L1MB8 LINE L1 -1 6177 5973 909 205 0 6 chr5 171922183 171922349 -27707801 - AluJb SINE Alu -11 301 137 1873 214 136 22 chr5 171922376 171922492 -27707658 - L1ME3A LINE L1 -221 5949 5848 207 0 0 0 chr5 171922492 171922515 -27707635 + (TTTTA)n Simple_repeat Simple_repeat 1 23 0 2174 99 0 14 chr5 171922515 171922799 -27707351 - AluSx SINE Alu -32 280 1 1873 214 136 22 chr5 171922799 171923271 -27706879 - L1ME3A LINE L1 -321 5849 5293 708 321 137 10 chr5 171923272 171923665 -27706485 + L3 LINE CR1 1088 1530 -47 1998 131 3 0 chr5 171923702 171923984 -27706166 + AluSx SINE Alu 1 283 -29 663 301 65 9 chr5 171924283 171924499 -27705651 - MIR SINE MIR -15 247 20 192 152 0 0 chr5 171925042 171925075 -27705075 + CT-rich Low_complexity Low_complexity 2 34 0 1688 132 99 4 chr5 171925232 171925355 -27704795 + AluJb SINE Alu 1 111 -201 222 37 0 0 chr5 171925355 171925382 -27704768 + (CA)n Simple_repeat Simple_repeat 2 28 0 1688 132 99 4 chr5 171925382 171925530 -27704620 + AluJb SINE Alu 111 298 -14 4233 123 50 0 chr5 171925634 171926217 -27703933 + LTR9 LTR ERV1 1 612 0 502 281 14 14 chr5 171926409 171926577 -27703573 + MIR SINE MIR 95 261 -1 307 238 119 20 chr5 171926665 171926766 -27703384 + MIR SINE MIR 36 146 -62 362 263 25 25 chr5 171927160 171927278 -27702872 + L2 LINE L2 3153 3270 -2 253 243 135 45 chr5 171927359 171927470 -27702680 + MLT1L LTR MaLR 126 246 -369 1268 172 9 18 chr5 171927552 171927779 -27702371 - AluJo SINE Alu -1 311 87 362 289 193 12 chr5 171927783 171928032 -27702118 + MLT1L LTR MaLR 322 615 0 469 205 19 176 chr5 171928500 171928633 -27701517 + MER5B DNA MER1_type 6 158 -20 2195 126 0 0 chr5 171928633 171928943 -27701207 - AluSq SINE Alu -3 310 1 407 61 61 0 chr5 171928947 171929013 -27701137 - L1MA7 LINE L1 -1 6290 6221 469 205 19 176 chr5 171929013 171929079 -27701071 + MER5B DNA MER1_type 161 178 0 517 264 129 7 chr5 171929093 171929248 -27700902 - MER5A DNA MER1_type -6 183 10 246 246 98 0 chr5 171929462 171929523 -27700627 + LTR8 LTR ERV1 2 68 -623 1671 182 92 50 chr5 171929584 171930007 -27700143 + LTR8A LTR ERV1 287 727 0 537 208 10 0 chr5 171930007 171930103 -27700047 + MER81 DNA DNA 18 114 0 381 252 49 41 chr5 171930340 171930463 -27699687 + MIR3 SINE MIR 38 161 -47 640 302 53 20 chr5 171931206 171931451 -27698699 + MIR SINE MIR 3 255 -7 1331 94 52 5 chr5 171931515 171931706 -27698444 - MER30 DNA MER1_type -30 200 1 2099 123 3 13 chr5 171931832 171932141 -27698009 - AluSx SINE Alu -6 306 1 21 0 0 0 chr5 171932346 171932367 -27697783 + AT_rich Low_complexity Low_complexity 1 21 0 211 398 49 0 chr5 171932681 171932804 -27697346 - L2 LINE L2 -602 2712 2584 982 210 11 0 chr5 171932947 171933128 -27697022 - MER5A DNA MER1_type -6 183 1 679 215 45 45 chr5 171933136 171933313 -27696837 + MER5B DNA MER1_type 1 177 -1 197 217 65 0 chr5 171933639 171933685 -27696465 - MIR3 SINE MIR -47 161 113 32 0 0 0 chr5 171933794 171933826 -27696324 + AT_rich Low_complexity Low_complexity 1 32 0 2132 124 3 9 chr5 171933827 171934142 -27696008 + AluSq SINE Alu 1 313 0 245 313 0 30 chr5 171934399 171934498 -27695652 - MARNA DNA Mariner -92 494 399 1938 136 7 13 chr5 171934905 171935207 -27694943 + AluSx SINE Alu 1 300 -12 242 238 0 32 chr5 171935472 171935535 -27694615 + MARNA DNA Mariner 431 491 -95 496 301 82 18 chr5 171935688 171935907 -27694243 + L3 LINE CR1 1319 1551 -26 340 227 27 13 chr5 171936224 171936299 -27693851 - MIR3 SINE MIR -21 187 112 234 329 168 0 chr5 171936683 171936844 -27693306 - L3 LINE CR1 -404 1173 986 2145 124 13 0 chr5 171937932 171938239 -27691911 + AluSx SINE Alu 2 312 0 224 281 52 10 chr5 171938352 171938448 -27691702 + MIR SINE MIR 151 250 -12 1298 150 44 114 chr5 171939229 171939589 -27690561 + Charlie1b DNA MER1_type 56 390 -133 408 74 0 0 chr5 171939595 171939649 -27690501 + L1PA15 LINE L1 6103 6156 -9 349 101 0 87 chr5 171939650 171939719 -27690431 - FLAM_A SINE Alu 0 133 71 2222 125 0 0 chr5 171939736 171940041 -27690109 - AluSx SINE Alu -7 305 1 1823 134 17 27 chr5 171940132 171940424 -27689726 - AluJo SINE Alu -12 300 12 1095 171 0 46 chr5 171940440 171940656 -27689494 - AluJb SINE Alu -22 290 85 1972 149 7 3 chr5 171941619 171941908 -27688242 + AluSx SINE Alu 1 290 -22 184 29 29 29 chr5 171942479 171942513 -27687637 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1898 157 4 0 chr5 171942515 171942796 -27687354 - AluSx SINE Alu -30 282 1 253 229 0 0 chr5 171943241 171943289 -27686861 - L2 LINE L2 -10 3262 3215 389 323 93 25 chr5 171943536 171943697 -27686453 - L2 LINE L2 -22 3250 3079 371 282 100 0 chr5 171943757 171943867 -27686283 + L2 LINE L2 3187 3307 -6 362 297 164 48 chr5 171943872 171944619 -27685531 - L2 LINE L2 -254 3018 2140 1961 106 41 20 chr5 171944619 171944911 -27685239 + AluSc SINE Alu 3 300 -9 362 297 164 48 chr5 171944911 171945082 -27685068 - L2 LINE L2 -1132 2140 1990 1428 204 86 40 chr5 171945988 171946385 -27683765 + MLT1C LTR MaLR 53 467 0 1849 145 35 0 chr5 171946565 171946854 -27683296 - AluSx SINE Alu -13 299 1 446 331 62 6 chr5 171946865 171947043 -27683107 - MIR SINE MIR -73 189 2 263 266 64 0 chr5 171947148 171947242 -27682908 + Charlie7 DNA MER1_type 1 100 -2512 2377 167 71 52 chr5 171947420 171947916 -27682234 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr5 171948051 171948072 -27682078 + AT_rich Low_complexity Low_complexity 1 21 0 312 293 69 0 chr5 171948418 171948534 -27681616 + MIR3 SINE MIR 78 201 -7 562 242 19 6 chr5 171949139 171949296 -27680854 + L1MD3 LINE L1 7821 7979 -16 2107 111 11 0 chr5 171949318 171949629 -27680521 + AluSx SINE Alu 1 314 0 396 190 0 44 chr5 171949826 171950047 -27680103 + AluJo SINE Alu 3 282 -20 1926 102 51 22 chr5 171950138 171950448 -27679702 - AluSx SINE Alu 0 318 1 262 108 0 0 chr5 171950448 171950485 -27679665 + MER58 DNA MER1_type 2383 2419 -1 546 251 105 32 chr5 171950776 171950852 -27679298 - MIR SINE MIR -11 251 182 1530 171 21 38 chr5 171950852 171951019 -27679131 - AluJb SINE Alu -30 282 121 218 0 95 0 chr5 171951019 171951061 -27679089 + T-rich Low_complexity Low_complexity 1 46 0 1530 171 21 38 chr5 171951061 171951180 -27678970 - AluJb SINE Alu -191 121 1 546 251 105 32 chr5 171951180 171951322 -27678828 - MIR SINE MIR -80 182 17 241 315 37 99 chr5 171951704 171951866 -27678284 - MIR3 SINE MIR 0 208 57 1908 150 3 0 chr5 171952546 171952846 -27677304 + AluJo SINE Alu 1 301 -11 627 335 31 16 chr5 171952925 171953179 -27676971 - MIR SINE MIR 0 262 5 2056 100 3 51 chr5 171953234 171953545 -27676605 + AluSx SINE Alu 12 307 -5 371 300 48 43 chr5 171953661 171953871 -27676279 - MIR SINE MIR -50 212 2 276 191 0 0 chr5 171954816 171954863 -27675287 + MIR3 SINE MIR 111 157 -51 337 287 78 31 chr5 171954902 171955031 -27675119 - MER5A DNA MER1_type -16 162 28 185 367 50 22 chr5 171954916 171955055 -27675095 + MER5A DNA MER1_type 44 186 -3 * 343 291 55 42 chr5 171955800 171955965 -27674185 + MIR SINE MIR 92 258 -4 10248 74 13 27 chr5 171956536 171957924 -27672226 + SVA Other Other 17 1384 -2 185 343 10 0 chr5 171958914 171959013 -27671137 + MIR SINE MIR 36 135 -73 316 267 0 0 chr5 171959100 171959204 -27670946 + MIR SINE MIR 50 120 -88 363 275 114 42 chr5 171959835 171960002 -27670148 - MIR SINE MIR -2 260 82 2255 106 0 34 chr5 171960358 171960679 -27669471 + AluSg SINE Alu 1 310 0 2599 58 0 3 chr5 171961084 171961393 -27668757 - AluY SINE Alu -3 308 1 332 93 0 0 chr5 171961393 171961436 -27668714 - Alu SINE Alu -257 44 2 240 294 0 15 chr5 171961439 171961507 -27668643 + MIR SINE MIR 81 147 -61 267 263 32 45 chr5 171961615 171961771 -27668379 + L3 LINE CR1 1173 1326 -251 234 238 0 109 chr5 171961869 171961970 -27668180 + MIR SINE MIR 133 222 -40 465 257 28 35 chr5 171962007 171962151 -27667999 + MIR SINE MIR 110 252 -10 2327 74 3 29 chr5 171963066 171963376 -27666774 - AluY SINE Alu -9 302 1 635 283 79 50 chr5 171963467 171963509 -27666641 + L1ME4a LINE L1 5392 5431 -690 2007 142 7 3 chr5 171963509 171963818 -27666332 + AluSx SINE Alu 3 312 0 635 283 79 50 chr5 171963818 171964333 -27665817 + L1ME4a LINE L1 5431 5965 -156 644 135 0 10 chr5 171964825 171964929 -27665221 + AluJb SINE Alu 31 133 -179 23 0 0 0 chr5 171964942 171964965 -27665185 + AT_rich Low_complexity Low_complexity 1 23 0 182 37 37 0 chr5 171964965 171964992 -27665158 + (TAAAA)n Simple_repeat Simple_repeat 4 31 0 207 0 0 0 chr5 171965187 171965210 -27664940 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 615 284 68 22 chr5 171965211 171965433 -27664717 - MIR SINE MIR -30 232 1 299 203 25 13 chr5 171965533 171965612 -27664538 - MIR SINE MIR -19 243 164 339 25 0 0 chr5 171966009 171966049 -27664101 + (TCC)n Simple_repeat Simple_repeat 2 41 0 2000 142 3 3 chr5 171966420 171966708 -27663442 - AluSx SINE Alu -24 288 1 624 213 0 29 chr5 171966710 171966846 -27663304 - FLAM_A SINE Alu -1 141 10 216 0 0 0 chr5 171967598 171967622 -27662528 + (CA)n Simple_repeat Simple_repeat 2 25 0 1862 164 92 6 chr5 171967632 171967991 -27662159 + MLT1B LTR MaLR 1 390 0 533 322 99 46 chr5 171968442 171968598 -27661552 + L2 LINE L2 2531 2677 -636 2392 104 0 0 chr5 171968598 171968896 -27661254 + AluSx SINE Alu 1 298 -14 533 322 99 46 chr5 171968896 171969471 -27660679 + L2 LINE L2 2677 3313 0 203 287 122 111 chr5 171969909 171969964 -27660186 - MER5A DNA MER1_type 0 189 136 2360 96 10 0 chr5 171969964 171970266 -27659884 + AluSq SINE Alu 1 305 -8 203 287 122 111 chr5 171970266 171970391 -27659759 - MER5A DNA MER1_type -53 136 7 386 306 184 12 chr5 171970578 171970833 -27659317 + MER102b DNA MER1_type 1 299 -42 1355 149 9 9 chr5 171971461 171971682 -27658468 - AluJb SINE Alu -5 307 87 2482 72 0 0 chr5 171971965 171972258 -27657892 + AluY SINE Alu 1 293 -18 2357 126 28 35 chr5 171972429 171972859 -27657291 - L1MA7 LINE L1 -1 6290 5864 297 245 73 98 chr5 171973004 171973184 -27656966 + MER5A DNA MER1_type 2 188 -1 572 121 24 0 chr5 171973624 171973707 -27656443 - AluSg/x SINE Alu -14 295 211 2350 106 3 0 chr5 171973822 171974133 -27656017 + AluSx SINE Alu 1 312 0 1117 147 16 16 chr5 171974258 171974442 -27655708 + AluJo SINE Alu 122 305 -7 2077 93 0 42 chr5 171974582 171974871 -27655279 + AluSg SINE Alu 1 277 -33 195 42 0 0 chr5 171974871 171974895 -27655255 + (GAAA)n Simple_repeat Simple_repeat 1 24 0 765 0 0 0 chr5 171974896 171974981 -27655169 + (GGAAA)n Simple_repeat Simple_repeat 4 88 0 225 311 44 0 chr5 171975054 171975144 -27655006 + L1ME LINE L1 5454 5547 -786 337 274 143 69 chr5 171975190 171975435 -27654715 + L1ME LINE L1 5539 5707 -459 222 318 88 40 chr5 171976152 171976300 -27653850 + MIR3 SINE MIR 47 201 -7 2149 111 0 40 chr5 171976348 171976672 -27653478 + AluSx SINE Alu 1 311 -1 2312 105 3 16 chr5 171976981 171977296 -27652854 - AluSx SINE Alu -1 311 1 250 323 31 0 chr5 171977303 171977399 -27652751 - L2 LINE L2 -18 3295 3197 5187 132 13 78 chr5 171977687 171978110 -27652040 + L1MA4 LINE L1 5360 5809 -491 2279 98 3 19 chr5 171978110 171978426 -27651724 + AluSq SINE Alu 1 311 -2 5187 132 13 78 chr5 171978426 171979008 -27651142 + L1MA4 LINE L1 5809 6299 -1 790 138 0 0 chr5 171980310 171980426 -27649724 + FLAM_C SINE Alu 1 116 -17 43 20 0 0 chr5 171980426 171980476 -27649674 + AT_rich Low_complexity Low_complexity 1 50 0 659 268 57 36 chr5 171980867 171981147 -27649003 + HAL1 LINE L1 641 926 -1581 1303 253 45 45 chr5 171981303 171981631 -27648519 + HAL1 LINE L1 1233 1563 -944 1795 164 0 32 chr5 171981631 171981747 -27648403 + AluJb SINE Alu 1 119 -193 2119 136 10 0 chr5 171981747 171982056 -27648094 + AluSx SINE Alu 1 312 0 1795 164 0 32 chr5 171982056 171982249 -27647901 + AluJb SINE Alu 119 300 -12 1303 253 45 45 chr5 171982249 171982474 -27647676 + HAL1 LINE L1 1562 1786 -721 331 234 149 0 chr5 171982524 171982618 -27647532 - MLT1G LTR MaLR -18 531 424 697 275 30 71 chr5 171982719 171983066 -27647084 - MLT1G LTR MaLR -223 367 26 1194 168 0 5 chr5 171983325 171983510 -27646640 - AluSg SINE Alu -126 184 1 1260 76 25 0 chr5 171983743 171983900 -27646250 + AluSg SINE Alu 1 161 -149 25 0 0 0 chr5 171983900 171983925 -27646225 + AT_rich Low_complexity Low_complexity 1 25 0 2962 10 0 0 chr5 171984186 171984500 -27645650 - AluYb8 SINE Alu -4 314 1 398 348 66 39 chr5 171984701 171984835 -27645315 - L1ME3A LINE L1 -280 5890 5761 2261 103 0 0 chr5 171984835 171985127 -27645023 - AluSx SINE Alu -16 296 5 398 348 66 39 chr5 171985127 171985576 -27644574 - L1ME3A LINE L1 -409 5761 5313 280 268 28 0 chr5 171985576 171985647 -27644503 + CT-rich Low_complexity Low_complexity 4 76 0 435 292 69 70 chr5 171985722 171985830 -27644320 - L1ME3A LINE L1 -964 5182 5075 1655 174 10 29 chr5 171985830 171986141 -27644009 + AluJo SINE Alu 1 305 -7 435 292 69 70 chr5 171986141 171986912 -27643238 - L1ME3A LINE L1 -1071 5075 4304 1838 132 0 0 chr5 171987589 171987873 -27642277 + AluSx SINE Alu 30 313 0 781 239 60 65 chr5 171987873 171988017 -27642133 + HAL1 LINE L1 2031 2174 -333 2014 125 6 53 chr5 171988017 171988337 -27641813 - AluSx SINE Alu -3 309 5 781 239 60 65 chr5 171988337 171988543 -27641607 + HAL1 LINE L1 2174 2379 -128 2112 117 7 0 chr5 171988624 171988936 -27641214 + AluSx SINE Alu 1 314 0 1969 143 215 191 chr5 171988951 171989394 -27640756 + L1MC3 LINE L1 6700 7131 -654 341 293 40 0 chr5 171989394 171989493 -27640657 + MLT1F1 LTR MaLR 35 137 -430 1969 143 215 191 chr5 171989493 171989675 -27640475 + L1MC3 LINE L1 7131 7307 -478 817 144 0 0 chr5 171989675 171989793 -27640357 + FLAM_C SINE Alu 1 118 -15 1969 143 215 191 chr5 171989793 171989979 -27640171 + L1MC3 LINE L1 7307 7487 -298 2213 111 0 3 chr5 171989979 171990268 -27639882 - AluSx SINE Alu -24 288 1 1969 143 215 191 chr5 171990268 171990416 -27639734 + L1MC3 LINE L1 7487 7785 0 644 295 97 38 chr5 171990669 171991074 -27639076 + MLT1K LTR MaLR 70 567 -21 1974 155 0 0 chr5 171991166 171991462 -27638688 + AluJb SINE Alu 1 296 -16 948 230 38 0 chr5 171991879 171992092 -27638058 + MER58A DNA MER1_type 1 221 -3 222 294 98 11 chr5 171992092 171992184 -27637966 - L2 LINE L2 -23 3249 3150 219 255 0 0 chr5 171992205 171992252 -27637898 - L2 LINE L2 -12 3260 3214 436 251 117 12 chr5 171992967 171993138 -27637012 - MLT1L LTR MaLR -3 612 424 5864 98 33 10 chr5 171993367 171994427 -27635723 - L1PB1 LINE L1 -1 6150 5090 247 285 62 49 chr5 171994428 171994572 -27635578 - MLT1L LTR MaLR -458 157 12 821 184 11 56 chr5 171995191 171995411 -27634739 + AluJb SINE Alu 142 353 0 198 0 0 0 chr5 171995411 171995433 -27634717 + (GGGA)n Simple_repeat Simple_repeat 2 23 0 2536 54 0 10 chr5 171996025 171996339 -27633811 + AluY SINE Alu 1 311 0 356 262 49 16 chr5 171996645 171996767 -27633383 + MIR SINE MIR 28 153 -109 2208 120 3 0 chr5 171997138 171997437 -27632713 + AluSq SINE Alu 1 300 -13 1634 148 36 36 chr5 171997447 171997751 -27632399 + AluJo SINE Alu 2 305 -7 250 335 143 9 chr5 171997902 171997963 -27632187 + L2 LINE L2 2703 2754 -560 243 0 0 0 chr5 171997963 171997990 -27632160 + (TAA)n Simple_repeat Simple_repeat 2 28 0 250 335 143 9 chr5 171997990 171998158 -27631992 + L2 LINE L2 2754 2963 -351 484 254 36 0 chr5 171998527 171998637 -27631513 + MER3 DNA MER1_type 9 122 -87 771 169 0 15 chr5 171998639 171998769 -27631381 - AluSg/x SINE Alu -11 301 174 708 158 102 0 chr5 171998913 171999040 -27631110 + FLAM_C SINE Alu 3 142 -1 2018 161 3 7 chr5 171999326 171999712 -27630438 - AluJb SINE Alu 0 385 1 5127 107 2 49 chr5 172000479 172000860 -27629290 + L1PA13 LINE L1 5400 5726 -437 2261 93 36 7 chr5 172000860 172001162 -27628988 + AluSx SINE Alu 1 311 -1 5127 107 2 49 chr5 172001162 172001577 -27628573 + L1PA13 LINE L1 5726 6159 -4 249 250 37 37 chr5 172001718 172001854 -27628296 + L1ME4a LINE L1 5952 6087 -34 1768 188 0 3 chr5 172001857 172002150 -27628000 - AluSx SINE Alu -20 292 1 478 213 68 0 chr5 172002150 172002264 -27627886 + L1ME1 LINE L1 6050 6177 -7 24437 102 12 48 chr5 172002397 172007127 -27623023 + L1PA7 LINE L1 12 4381 -1773 2189 103 0 0 chr5 172007127 172007435 -27622715 - AluSg SINE Alu 0 308 1 24437 102 12 48 chr5 172007435 172009142 -27621008 + L1PA7 LINE L1 4381 6149 -5 1878 142 23 13 chr5 172009510 172009819 -27620331 - AluJo SINE Alu 0 312 1 2072 116 7 10 chr5 172010373 172010727 -27619423 + AluSx SINE Alu 1 312 0 1875 141 3 23 chr5 172011218 172011522 -27618628 - AluJb SINE Alu -14 298 1 829 196 0 0 chr5 172011533 172011666 -27618484 - FLAM_C SINE Alu 0 133 1 25 0 0 0 chr5 172011889 172011914 -27618236 + AT_rich Low_complexity Low_complexity 1 25 0 206 23 68 23 chr5 172012139 172012183 -27617967 + T-rich Low_complexity Low_complexity 4 49 0 2026 127 0 3 chr5 172012190 172012473 -27617677 - AluSx SINE Alu -30 282 1 734 274 14 0 chr5 172012631 172012843 -27617307 - L1MC5 LINE L1 -51 7910 7696 314 116 0 0 chr5 172012853 172012896 -27617254 - MER4D LTR ERV1 -74 829 787 1286 204 90 64 chr5 172012896 172013395 -27616755 - L1MC5 LINE L1 -258 7703 7192 31 26 0 0 chr5 172013403 172013441 -27616709 + AT_rich Low_complexity Low_complexity 1 38 0 2017 106 0 0 chr5 172013669 172013933 -27616217 - AluSx SINE Alu -7 305 42 1279 196 0 13 chr5 172013933 172014168 -27615982 + AluJb SINE Alu 73 304 -8 1617 185 45 0 chr5 172014170 172014457 -27615693 + AluJb SINE Alu 1 300 -12 3242 156 17 81 chr5 172014458 172015178 -27614972 - L1 LINE L1 -1813 4333 3660 5040 229 32 55 chr5 172015179 172016044 -27614106 + L1MC/D LINE L1 3639 4523 -1719 836 191 0 0 chr5 172016044 172016175 -27613975 + FLAM_C SINE Alu 1 131 -2 5040 229 32 55 chr5 172016175 172016553 -27613597 + L1MC/D LINE L1 4523 4908 -1334 479 111 136 0 chr5 172016553 172016634 -27613516 - L1MA4A LINE L1 -8 6295 6204 5040 229 32 55 chr5 172016634 172016979 -27613171 + L1MC/D LINE L1 4908 5259 -983 2144 125 7 3 chr5 172016979 172017284 -27612866 + AluSx SINE Alu 1 306 -6 5040 229 32 55 chr5 172017284 172017528 -27612622 + L1MC/D LINE L1 5259 5507 -735 1676 166 3 11 chr5 172017528 172017812 -27612338 + AluJb SINE Alu 1 282 -30 365 53 0 18 chr5 172017816 172017873 -27612277 + (TAAAA)n Simple_repeat Simple_repeat 2 57 0 5040 229 32 55 chr5 172017873 172018062 -27612088 + L1MC/D LINE L1 5510 5602 -640 4922 97 38 4 chr5 172018143 172018833 -27611317 - L1PB1 LINE L1 -3 6148 5436 4771 111 7 14 chr5 172019041 172019653 -27610497 + L1P4 LINE L1 4622 5221 -947 2113 119 37 0 chr5 172019653 172019947 -27610203 - AluSx SINE Alu -7 305 1 4771 111 7 14 chr5 172019947 172020307 -27609843 + L1P4 LINE L1 5221 5582 -586 931 194 11 11 chr5 172020366 172020552 -27609598 + MER3 DNA MER1_type 24 209 0 270 364 71 14 chr5 172020552 172020692 -27609458 + MIR SINE MIR 31 178 -84 213 306 194 6 chr5 172021137 172021297 -27608853 - L2 LINE L2 -97 3216 3027 2148 206 72 11 chr5 172021297 172021739 -27608411 + MLT2B1 LTR ERVL 1 469 -51 324 341 16 8 chr5 172021774 172021900 -27608250 - L2 LINE L2 -340 2973 2847 569 160 250 0 chr5 172022111 172022211 -27607939 + FLAM_C SINE Alu 2 126 -17 994 243 84 91 chr5 172022267 172022646 -27607504 - MLT1H1 LTR MaLR -2 553 178 2279 113 0 0 chr5 172022646 172022938 -27607212 - AluSq SINE Alu -21 292 1 994 243 84 91 chr5 172022938 172023072 -27607078 - MLT1H1 LTR MaLR -377 178 44 1524 221 73 75 chr5 172023081 172023637 -27606513 - MLT1E LTR MaLR 0 593 1 418 246 43 36 chr5 172023713 172023851 -27606299 - L2 LINE L2 0 3272 3134 944 131 0 0 chr5 172023901 172024031 -27606119 + FLAM_C SINE Alu 1 130 -3 322 316 124 63 chr5 172024356 172024846 -27605304 - L2 LINE L2 -571 2743 2224 2473 168 52 2 chr5 172024964 172025370 -27604780 - MSTB LTR MaLR 0 426 1 5183 207 118 51 chr5 172025370 172026319 -27603831 - MSTB-int LTR MaLR 0 1580 494 2193 109 7 13 chr5 172026319 172026622 -27603528 + AluSq SINE Alu 1 301 -12 5183 207 118 51 chr5 172026622 172027150 -27603000 - MSTB-int LTR MaLR -1086 494 3 2190 181 42 15 chr5 172027152 172027560 -27602590 - MSTB LTR MaLR 0 426 8 930 88 22 36 chr5 172027563 172027700 -27602450 + AluJo SINE Alu 1 135 -177 329 287 7 40 chr5 172027721 172027871 -27602279 - L2 LINE L2 -1254 2060 1916 3263 217 48 45 chr5 172027993 172028793 -27601357 - L1MB7 LINE L1 -13 6171 5367 2054 134 0 3 chr5 172028793 172029091 -27601059 - AluSx SINE Alu -15 297 1 3263 217 48 45 chr5 172029091 172029192 -27600958 - L1MB7 LINE L1 -817 5367 5268 27 0 0 0 chr5 172029192 172029219 -27600931 + AT_rich Low_complexity Low_complexity 1 27 0 792 188 8 0 chr5 172029219 172029347 -27600803 - FLAM_C SINE Alu -13 130 2 533 175 6 88 chr5 172029347 172029386 -27600764 - L1MB7 LINE L1 -864 5282 5241 10338 68 0 50 chr5 172029386 172030314 -27599836 + L1PA6 LINE L1 4088 5061 -1093 2349 99 3 0 chr5 172030314 172030617 -27599533 + AluY SINE Alu 1 304 -7 10338 68 0 50 chr5 172030617 172030630 -27599520 + L1PA6 LINE L1 5061 5073 -1081 2041 108 0 18 chr5 172030630 172030909 -27599241 + AluSc SINE Alu 3 276 -33 258 56 0 0 chr5 172030909 172030945 -27599205 + (CAA)n Simple_repeat Simple_repeat 1 36 0 10338 68 0 50 chr5 172030945 172031744 -27598406 + L1PA6 LINE L1 5072 5754 -400 7154 84 46 27 chr5 172031744 172033294 -27596856 + SVA Other Other 2 1384 -2 10338 68 0 50 chr5 172033294 172033663 -27596487 + L1PA6 LINE L1 5754 6140 -14 186 71 0 0 chr5 172033663 172033691 -27596459 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 533 175 6 88 chr5 172033691 172033810 -27596340 - L1MB7 LINE L1 -903 5243 5136 851 134 0 35 chr5 172033842 172033984 -27596166 + FLAM_C SINE Alu 7 143 0 377 200 21 100 chr5 172033988 172034076 -27596074 - L1MB7 LINE L1 -979 5167 5092 4077 51 30 18 chr5 172034076 172034605 -27595545 + L1PA5 LINE L1 5642 6154 0 377 200 21 100 chr5 172034605 172034656 -27595494 - L1MB7 LINE L1 -1054 5092 5039 2231 128 0 6 chr5 172034757 172035070 -27595080 + AluSx SINE Alu 1 311 -1 2035 144 0 7 chr5 172035110 172035409 -27594741 + AluSq SINE Alu 1 297 -16 1978 138 10 3 chr5 172035415 172035713 -27594437 + AluJb SINE Alu 1 300 -12 1297 182 13 17 chr5 172035772 172036003 -27594147 + AluSx SINE Alu 34 263 -49 1350 132 0 0 chr5 172036058 172036247 -27593903 - AluSg/x SINE Alu -2 310 122 5621 204 43 19 chr5 172036257 172038527 -27591623 + L1MC1 LINE L1 4006 6327 -6 833 187 0 0 chr5 172038582 172038721 -27591429 + FAM SINE Alu 16 154 -31 628 229 74 57 chr5 172039213 172039257 -27590893 - MER5B DNA MER1_type 0 178 136 1648 163 28 0 chr5 172039257 172039545 -27590605 + AluJo SINE Alu 1 296 -16 628 229 74 57 chr5 172039545 172039675 -27590475 - MER5B DNA MER1_type -42 136 1 1922 142 7 10 chr5 172039808 172040147 -27590003 - AluSx SINE Alu 0 312 1 188 241 138 35 chr5 172040167 172040225 -27589925 - L2 LINE L2 -9 3304 3241 337 309 24 32 chr5 172040334 172040457 -27589693 + MER91A DNA MER1_type 75 196 0 1297 138 5 41 chr5 172041237 172041455 -27588695 + AluJo SINE Alu 87 296 -16 2147 133 3 0 chr5 172041530 172041839 -27588311 + AluJb SINE Alu 1 310 -2 2420 69 0 0 chr5 172042054 172042342 -27587808 + AluSq SINE Alu 1 288 -25 366 293 30 0 chr5 172042548 172042647 -27587503 + MER5A DNA MER1_type 63 164 -25 856 152 8 0 chr5 172043242 172043374 -27586776 - FLAM_C SINE Alu -10 133 1 280 314 103 48 chr5 172043396 172043667 -27586483 + L2 LINE L2 2806 3091 -222 723 147 119 0 chr5 172043705 172043848 -27586302 + MER20 DNA MER1_type 57 216 -3 1915 143 39 0 chr5 172044635 172044921 -27585229 + AluSx SINE Alu 1 297 -15 207 284 128 39 chr5 172045070 172045172 -27584978 - MIR SINE MIR -68 140 30 238 281 116 8 chr5 172045454 172045575 -27584575 - Charlie8 DNA MER1_type -2218 199 66 2204 110 27 3 chr5 172045730 172046031 -27584119 + AluSq SINE Alu 1 308 -5 866 122 0 8 chr5 172046209 172046332 -27583818 - AluSp SINE Alu -191 122 1 180 0 0 0 chr5 172046436 172046456 -27583694 + (A)n Simple_repeat Simple_repeat 1 20 0 838 134 0 35 chr5 172046513 172046655 -27583495 - FLAM_C SINE Alu 0 143 7 2186 119 0 10 chr5 172046907 172047210 -27582940 + AluSq SINE Alu 1 300 -13 201 250 89 0 chr5 172048144 172048200 -27581950 + MER91C DNA MER1_type 42 102 -38 1414 150 110 40 chr5 172048580 172048853 -27581297 + AluSx SINE Alu 2 293 -19 203 273 102 11 chr5 172049086 172049174 -27580976 + L3 LINE CR1 887 982 -595 311 278 94 78 chr5 172049266 172049457 -27580693 + MIR SINE MIR 36 229 -33 222 326 12 23 chr5 172049413 172049499 -27580651 - MIR SINE MIR 0 262 178 * 205 255 85 104 chr5 172049511 172049723 -27580427 + L3 LINE CR1 1297 1504 -73 1867 113 109 0 chr5 172049737 172050012 -27580138 + AluSq SINE Alu 1 305 -8 268 267 17 0 chr5 172050050 172050110 -27580040 - Charlie8 DNA MER1_type -8 2409 2349 243 217 14 29 chr5 172050148 172050217 -27579933 + L2 LINE L2 2913 2980 -333 268 132 0 0 chr5 172050391 172050429 -27579721 + AluSc SINE Alu 94 131 -168 2215 105 3 0 chr5 172050432 172050726 -27579424 + AluSp SINE Alu 1 295 -18 232 132 53 0 chr5 172051572 172051610 -27578540 + MER39B LTR ERV1 1 40 -613 273 298 25 2 chr5 172051651 172051745 -27578405 + LTR48B LTR ERV1 129 214 -430 786 133 37 7 chr5 172051841 172051976 -27578174 + LTR48 LTR ERV1 477 615 -172 1583 104 41 5 chr5 172051976 172052196 -27577954 + AluSg SINE Alu 1 228 -82 228 196 39 0 chr5 172052209 172052260 -27577890 - LTR5 LTR ERVK -14 955 903 4542 154 24 43 chr5 172052444 172053344 -27576806 - LTR5 LTR ERVK -83 886 4 492 143 0 26 chr5 172053348 172053425 -27576725 + AluSg SINE Alu 226 300 -11 444 160 130 0 chr5 172053425 172053525 -27576625 + LTR48 LTR ERV1 606 718 -69 525 202 0 40 chr5 172053965 172054089 -27576061 + MER106B DNA MER1_type 20 138 -921 1371 203 105 9 chr5 172054089 172054404 -27575746 - MER2 DNA MER2_type 0 345 1 1066 104 0 0 chr5 172054419 172054554 -27575596 + AluSq/x SINE Alu 1 135 -177 2296 76 0 7 chr5 172054555 172054845 -27575305 + AluY SINE Alu 1 288 -23 197 175 0 75 chr5 172054927 172054967 -27575183 + L2 LINE L2 3186 3222 -91 189 273 0 0 chr5 172055007 172055051 -27575099 - MIR SINE MIR -15 247 204 1079 144 98 180 chr5 172055060 172055387 -27574763 - AluJo SINE Alu -1 301 2 291 347 83 42 chr5 172055389 172055582 -27574568 - MIR SINE MIR -43 219 19 407 200 127 0 chr5 172055923 172056033 -27574117 + L1ME2 LINE L1 6034 6157 -7 1969 113 55 0 chr5 172056100 172056391 -27573759 + AluSx SINE Alu 2 308 -4 363 293 60 23 chr5 172056792 172056925 -27573225 + MIR SINE MIR 47 184 -78 1614 173 40 4 chr5 172057215 172057493 -27572657 + AluJb SINE Alu 10 297 -15 434 250 57 113 chr5 172057493 172057738 -27572412 - L1ME4a LINE L1 -90 6031 5823 2109 97 4 0 chr5 172057738 172058007 -27572143 - AluSq SINE Alu -43 270 1 434 250 57 113 chr5 172058007 172058221 -27571929 - L1ME4a LINE L1 -298 5823 5598 2429 84 3 7 chr5 172058373 172058683 -27571467 + AluSp SINE Alu 1 309 -4 2061 133 0 10 chr5 172058975 172059296 -27570854 + AluSq SINE Alu 1 313 0 2139 142 7 0 chr5 172059574 172059884 -27570266 + AluSx SINE Alu 1 312 0 2312 94 0 0 chr5 172060133 172060419 -27569731 + AluSx SINE Alu 3 288 -24 2240 47 0 0 chr5 172060561 172060816 -27569334 + AluY SINE Alu 47 301 -10 1779 151 3 14 chr5 172061737 172062029 -27568121 + AluSx SINE Alu 1 289 -23 1912 149 4 4 chr5 172062404 172062679 -27567471 + AluSx SINE Alu 1 275 -37 1128 90 11 6 chr5 172062680 172062688 -27567462 + (GGAA)n Simple_repeat Simple_repeat 1 7 -214 186 43 0 0 chr5 172062688 172062711 -27567439 + (GGGAA)n Simple_repeat Simple_repeat 2 24 0 1128 90 11 6 chr5 172062711 172062723 -27567427 + (GGAA)n Simple_repeat Simple_repeat 7 221 0 1128 90 11 6 chr5 172062723 172062900 -27567250 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 213 94 0 0 chr5 172063307 172063339 -27566811 + (TG)n Simple_repeat Simple_repeat 2 33 0 1439 154 114 10 chr5 172063342 172063648 -27566502 - MER44D DNA MER2_type 0 609 2 182 279 44 0 chr5 172063688 172063756 -27566394 + MIR SINE MIR 147 217 -45 209 257 27 27 chr5 172064029 172064103 -27566047 + MIR3 SINE MIR 131 204 -4 1011 186 82 58 chr5 172064922 172065303 -27564847 - MLT1A1 LTR MaLR 0 365 22 1046 171 72 68 chr5 172065330 172065593 -27564557 + MER21A LTR ERV1 1 264 -667 2987 157 45 45 chr5 172065599 172065623 -27564527 + MER21A LTR ERV1 377 400 -531 2127 114 7 14 chr5 172065623 172065920 -27564230 + AluSx SINE Alu 1 295 -17 2987 157 45 45 chr5 172065920 172066444 -27563706 + MER21A LTR ERV1 399 925 -6 276 303 88 55 chr5 172066777 172066903 -27563247 - MIR SINE MIR 0 262 142 2428 68 0 0 chr5 172066903 172067199 -27562951 + AluY SINE Alu 1 296 -15 198 0 0 0 chr5 172067199 172067221 -27562929 + (CA)n Simple_repeat Simple_repeat 2 23 0 276 303 88 55 chr5 172067221 172067331 -27562819 - MIR SINE MIR -119 143 17 1082 168 287 8 chr5 172069884 172070128 -27560022 - AluJb SINE Alu 0 312 1 1028 156 11 34 chr5 172071280 172071459 -27558691 - AluJo SINE Alu -23 289 115 1657 169 36 23 chr5 172071459 172071760 -27558390 + AluJb SINE Alu 1 305 -7 2357 103 0 0 chr5 172071942 172072242 -27557908 + AluSx SINE Alu 1 300 -12 1911 157 0 31 chr5 172072253 172072572 -27557578 + AluJb SINE Alu 1 309 -3 2099 131 6 16 chr5 172072572 172072884 -27557266 + AluSx SINE Alu 1 309 -3 1751 174 12 20 chr5 172072993 172073337 -27556813 - MER2 DNA MER2_type -3 341 1 1725 136 32 25 chr5 172073938 172074218 -27555932 + AluSx SINE Alu 1 282 -30 633 245 201 10 chr5 172074363 172074766 -27555384 - L2 LINE L2 -269 3044 2559 1087 145 44 84 chr5 172074795 172075022 -27555128 + AluJo SINE Alu 1 218 -94 697 243 155 65 chr5 172075022 172075149 -27555001 - L2 LINE L2 -786 2528 2414 2203 129 0 3 chr5 172075149 172075460 -27554690 + AluSx SINE Alu 1 310 -2 697 243 155 65 chr5 172075460 172075610 -27554540 - L2 LINE L2 -900 2414 2279 2191 58 73 0 chr5 172075610 172075884 -27554266 + AluY SINE Alu 1 294 -17 697 243 155 65 chr5 172075884 172076004 -27554146 - L2 LINE L2 -1035 2279 2094 721 172 0 8 chr5 172076007 172076129 -27554021 + AluSq/x SINE Alu 7 127 -186 2240 119 0 0 chr5 172076137 172076430 -27553720 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr5 172076430 172076452 -27553698 + AT_rich Low_complexity Low_complexity 1 22 0 1542 35 0 0 chr5 172076468 172076641 -27553509 + AluY SINE Alu 130 302 -9 338 240 153 6 chr5 172076645 172076828 -27553322 - L2 LINE L2 -1211 2103 1894 869 151 7 20 chr5 172076940 172077086 -27553064 + FRAM SINE Alu 18 161 -15 317 248 296 32 chr5 172077120 172077369 -27552781 - L2 LINE L2 -1607 1707 1525 1845 87 4 0 chr5 172077369 172077598 -27552552 + AluSp SINE Alu 1 230 -83 317 248 296 32 chr5 172077598 172077659 -27552491 - L2 LINE L2 -1789 1525 1315 955 201 15 29 chr5 172078027 172078231 -27551919 + AluJo SINE Alu 82 282 -30 2090 111 40 3 chr5 172078241 172078539 -27551611 - AluSq SINE Alu -2 311 3 1871 137 0 7 chr5 172078576 172078854 -27551296 + AluSx SINE Alu 24 299 -13 1841 145 14 24 chr5 172078865 172079154 -27550996 + AluJo SINE Alu 1 286 -26 1238 171 144 11 chr5 172079207 172079470 -27550680 - AluJo SINE Alu 0 302 5 21 36 0 0 chr5 172079472 172079500 -27550650 + AT_rich Low_complexity Low_complexity 1 28 0 2053 121 3 16 chr5 172080197 172080510 -27549640 - AluSx SINE Alu -3 309 1 217 356 51 28 chr5 172080586 172080763 -27549387 - MIR3 SINE MIR -16 192 12 222 37 0 0 chr5 172080823 172080850 -27549300 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 843 132 0 0 chr5 172080854 172080968 -27549182 - AluJb SINE Alu -31 281 168 380 194 0 0 chr5 172080968 172081035 -27549115 - AluJ/FLAM SINE Alu -235 67 1 262 191 0 0 chr5 172081099 172081146 -27549004 - L1 LINE L1 -1263 4883 4837 1393 190 3 83 chr5 172081441 172081560 -27548590 + AluSx SINE Alu 1 128 -184 2214 131 0 0 chr5 172081560 172081866 -27548284 - AluSx SINE Alu -6 306 1 1393 190 3 83 chr5 172081866 172082072 -27548078 + AluSx SINE Alu 128 300 -12 1195 121 6 6 chr5 172082090 172082272 -27547878 + AluJb SINE Alu 131 312 0 1067 185 22 0 chr5 172082294 172082478 -27547672 + AluJo SINE Alu 8 195 -117 183 80 0 0 chr5 172082575 172082600 -27547550 + (TATATG)n Simple_repeat Simple_repeat 5 29 0 2179 99 7 0 chr5 172082723 172083027 -27547123 - AluSp SINE Alu 0 306 1 1533 181 23 26 chr5 172083164 172083467 -27546683 - AluJo SINE Alu -10 302 1 1986 121 65 211 chr5 172083713 172084132 -27546018 + Tigger2 DNA MER2_type 2 481 -2237 1765 184 20 0 chr5 172084132 172084426 -27545724 + AluJb SINE Alu 3 302 -10 1986 121 65 211 chr5 172084426 172084512 -27545638 + Tigger2 DNA MER2_type 481 2717 -1 254 137 0 59 chr5 172084563 172084614 -27545536 - L2 LINE L2 -1 3271 3224 221 139 0 70 chr5 172084582 172084625 -27545525 - MIR SINE MIR -11 251 212 * 45 34 0 0 chr5 172084739 172084798 -27545352 + AT_rich Low_complexity Low_complexity 1 59 0 278 297 135 83 chr5 172085001 172085255 -27544895 - L2 LINE L2 0 3313 3074 2232 100 3 16 chr5 172085255 172085564 -27544586 + AluSx SINE Alu 1 305 -7 278 297 135 83 chr5 172085564 172085767 -27544383 - L2 LINE L2 -239 3074 2832 2260 96 3 22 chr5 172085854 172086167 -27543983 + AluSg SINE Alu 4 310 0 220 244 13 64 chr5 172086183 172086261 -27543889 - L2 LINE L2 -622 2692 2619 213 154 0 0 chr5 172086285 172086324 -27543826 + GA-rich Low_complexity Low_complexity 1 39 0 1961 142 7 0 chr5 172086370 172086658 -27543492 + AluJb SINE Alu 5 294 -18 236 296 70 42 chr5 172086909 172087196 -27542954 + L1ME2 LINE L1 5609 5903 -218 567 184 0 46 chr5 172087336 172087445 -27542705 + AluJo/FLAM SINE Alu 24 127 -185 2182 139 0 0 chr5 172087446 172087756 -27542394 + AluSx SINE Alu 1 310 -2 183 42 0 0 chr5 172087761 172087785 -27542365 + (GA)n Simple_repeat Simple_repeat 1 24 0 1073 153 28 81 chr5 172087803 172087961 -27542189 + MER33 DNA MER1_type 1 143 -2442 1763 184 3 7 chr5 172087961 172088255 -27541895 - AluJb SINE Alu -19 293 1 1073 153 28 81 chr5 172088255 172088344 -27541806 + MER33 DNA MER1_type 143 235 -89 2152 115 3 7 chr5 172088345 172088641 -27541509 + AluSg SINE Alu 1 295 -15 29 0 0 0 chr5 172088641 172088670 -27541480 + AT_rich Low_complexity Low_complexity 1 29 0 585 113 0 0 chr5 172088896 172088976 -27541174 + MADE1 DNA Mariner 1 80 0 307 172 31 0 chr5 172089313 172089377 -27540773 + L1ME2 LINE L1 6026 6091 -73 2302 122 0 0 chr5 172089394 172089705 -27540445 - AluSq SINE Alu 0 313 3 1949 137 7 7 chr5 172089750 172090050 -27540100 + AluSx SINE Alu 1 300 -12 183 42 0 0 chr5 172090113 172090137 -27540013 + (TAAAAA)n Simple_repeat Simple_repeat 2 25 0 2654 55 0 0 chr5 172090140 172090448 -27539702 + AluY SINE Alu 1 308 -3 23 0 0 0 chr5 172090761 172090784 -27539366 + AT_rich Low_complexity Low_complexity 1 23 0 2359 92 3 7 chr5 172091184 172091489 -27538661 - AluSq SINE Alu -9 304 1 452 252 18 9 chr5 172091973 172092084 -27538066 + L2 LINE L2 3195 3306 -7 2096 123 3 28 chr5 172092086 172092404 -27537746 + AluSx SINE Alu 3 312 0 455 83 0 69 chr5 172092490 172092635 -27537515 + (TA)n Simple_repeat Simple_repeat 1 135 0 430 247 0 0 chr5 172092714 172092807 -27537343 + L2 LINE L2 3211 3303 -10 2045 138 0 7 chr5 172093067 172093357 -27536793 + AluSx SINE Alu 1 288 -24 2157 133 0 0 chr5 172093781 172094082 -27536068 + AluSg SINE Alu 1 301 -9 1705 167 0 4 chr5 172094227 172094503 -27535647 + AluJb SINE Alu 3 277 -35 441 0 0 0 chr5 172094504 172094553 -27535597 + (TTA)n Simple_repeat Simple_repeat 3 51 0 7403 39 0 0 chr5 172094553 172095417 -27534733 - L1PA3 LINE L1 -18 6137 5274 * 8090 23 2 10 chr5 172095415 172096382 -27533768 + L1P LINE L1 4351 5309 -837 312 310 30 0 chr5 172096397 172096497 -27533653 - L2 LINE L2 -12 3301 3199 2287 107 0 3 chr5 172096923 172097222 -27532928 + AluSg SINE Alu 1 298 -12 236 267 191 58 chr5 172097927 172098152 -27531998 + L1MC4 LINE L1 7621 7875 -167 2326 81 7 3 chr5 172098180 172098477 -27531673 + AluSg SINE Alu 1 298 -12 570 209 0 0 chr5 172098513 172098628 -27531522 - AluJ SINE Alu -11 301 187 938 130 0 7 chr5 172098628 172098766 -27531384 - AluJ SINE Alu -175 137 1 618 268 30 12 chr5 172098928 172099096 -27531054 - MER5B DNA MER1_type -1 177 7 212 253 63 25 chr5 172099121 172099200 -27530950 + L2 LINE L2 3168 3249 -23 347 304 112 53 chr5 172099732 172099890 -27530260 - L2 LINE L2 -6 3307 3160 1823 77 4 0 chr5 172099890 172100123 -27530027 + AluSp SINE Alu 80 313 0 347 304 112 53 chr5 172100123 172100322 -27529828 - L2 LINE L2 -153 3160 2929 247 318 60 33 chr5 172100357 172100508 -27529642 - L2 LINE L2 -458 2856 2702 372 194 145 57 chr5 172100517 172100641 -27529509 - MLT1E1 LTR MaLR -41 613 479 1618 188 33 10 chr5 172100674 172100870 -27529280 - AluJo SINE Alu 0 312 105 1767 153 8 0 chr5 172100870 172101131 -27529019 + AluJb SINE Alu 1 263 -49 1618 188 33 10 chr5 172101131 172101237 -27528913 - AluJo SINE Alu -207 105 3 915 166 19 32 chr5 172101407 172101564 -27528586 - FRAM SINE Alu -21 155 1 307 284 137 22 chr5 172101629 172101719 -27528431 - L2 LINE L2 -1277 2037 1959 2216 108 3 7 chr5 172101719 172102024 -27528126 + AluSq SINE Alu 1 304 -9 307 284 137 22 chr5 172102024 172102211 -27527939 - L2 LINE L2 -1355 1959 1728 198 289 156 17 chr5 172102355 172102528 -27527622 - L2 LINE L2 -1950 1364 1168 309 109 0 0 chr5 172102695 172102741 -27527409 + (TA)n Simple_repeat Simple_repeat 1 46 0 752 214 0 0 chr5 172102872 172102989 -27527161 + FLAM_C SINE Alu 2 118 -25 2226 116 3 0 chr5 172103010 172103302 -27526848 - AluSp SINE Alu -20 293 1 1507 147 0 107 chr5 172103328 172103628 -27526522 + AluSx SINE Alu 17 284 -28 315 104 0 0 chr5 172103633 172103681 -27526469 + (TA)n Simple_repeat Simple_repeat 2 49 0 420 256 144 19 chr5 172103801 172103961 -27526189 + MIR SINE MIR 35 214 -48 399 263 35 35 chr5 172103981 172104095 -27526055 - MER81 DNA DNA 0 114 1 1898 123 0 0 chr5 172104221 172104474 -27525676 + AluSc SINE Alu 1 253 -56 292 260 73 0 chr5 172104490 172104586 -27525564 + L1ME1 LINE L1 6008 6110 -56 1617 167 26 36 chr5 172104595 172104901 -27525249 - AluJo SINE Alu -9 303 1 2225 111 10 0 chr5 172104905 172105239 -27524911 - AluSx SINE Alu 0 337 1 643 302 54 18 chr5 172105501 172105723 -27524427 + MIR SINE MIR 33 262 0 21 0 0 0 chr5 172106262 172106283 -27523867 + AT_rich Low_complexity Low_complexity 1 21 0 239 229 0 33 chr5 172106438 172106499 -27523651 + MIR SINE MIR 11 69 -193 2233 110 0 13 chr5 172106500 172106808 -27523342 + AluSx SINE Alu 1 304 -8 329 310 20 0 chr5 172106837 172106937 -27523213 + MIR SINE MIR 161 262 0 2261 95 7 0 chr5 172107053 172107365 -27522785 + AluSq SINE Alu 1 314 0 649 160 28 0 chr5 172107378 172107484 -27522666 + AluJb SINE Alu 14 122 -190 333 0 0 0 chr5 172107484 172107521 -27522629 + (CA)n Simple_repeat Simple_repeat 2 38 0 2177 96 0 0 chr5 172107881 172108152 -27521998 - AluSx SINE Alu -36 276 6 427 331 41 17 chr5 172108319 172108491 -27521659 - MIR SINE MIR -72 190 15 250 310 0 11 chr5 172108619 172108706 -27521444 - L2 LINE L2 -36 3277 3192 22 0 0 0 chr5 172108949 172108971 -27521179 + AT_rich Low_complexity Low_complexity 1 22 0 2294 84 3 7 chr5 172108976 172109272 -27520878 + AluSc SINE Alu 1 295 -14 182 286 0 0 chr5 172109496 172109545 -27520605 + L3 LINE CR1 1181 1229 -348 797 242 79 9 chr5 172109604 172109819 -27520331 - MIR SINE MIR -2 260 31 1915 140 0 19 chr5 172109933 172110103 -27520047 - AluJb SINE Alu -10 302 139 1682 167 33 13 chr5 172110103 172110402 -27519748 - AluSx SINE Alu -7 305 1 1915 140 0 19 chr5 172110402 172110539 -27519611 - AluJb SINE Alu -173 139 1 643 280 17 0 chr5 172110954 172111129 -27519021 + AluSq SINE Alu 120 297 -16 248 252 97 29 chr5 172111265 172111368 -27518782 - MIR SINE MIR -65 197 88 604 179 0 0 chr5 172111772 172111867 -27518283 + AluSg/x SINE Alu 185 279 -33 249 33 0 0 chr5 172111869 172111899 -27518251 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 323 238 79 0 chr5 172111900 172112001 -27518149 + MIR SINE MIR 154 262 0 2268 106 0 0 chr5 172112005 172112297 -27517853 - AluSx SINE Alu -20 292 1 14740 119 32 26 chr5 172112298 172114599 -27515551 + Tigger2 DNA MER2_type 406 2718 0 296 331 49 37 chr5 172114714 172114877 -27515273 + L2 LINE L2 2935 3099 -173 2898 202 75 37 chr5 172114924 172115254 -27514896 + MER82 DNA MER2_type 2 318 -335 405 0 0 0 chr5 172115254 172115299 -27514851 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 1906 141 0 14 chr5 172115299 172115582 -27514568 - AluSx SINE Alu -33 279 1 2898 202 75 37 chr5 172115582 172115878 -27514272 + MER82 DNA MER2_type 317 653 0 1181 257 103 37 chr5 172115940 172116282 -27513868 + LTR33 LTR ERVL 1 386 -135 1994 194 14 30 chr5 172116282 172116653 -27513497 - MLT1A1 LTR MaLR 0 365 1 1181 257 103 37 chr5 172116653 172116796 -27513354 + LTR33 LTR ERVL 386 518 -3 441 0 0 0 chr5 172117976 172118025 -27512125 + (CA)n Simple_repeat Simple_repeat 2 50 0 566 177 171 11 chr5 172118195 172118352 -27511798 - MER5A DNA MER1_type 0 189 4 22 0 0 0 chr5 172119328 172119350 -27510800 + AT_rich Low_complexity Low_complexity 1 22 0 517 319 24 44 chr5 172119811 172120059 -27510091 + MIR SINE MIR 2 244 -18 862 239 5 5 chr5 172121458 172121642 -27508508 + MIR SINE MIR 12 195 -67 4049 167 47 106 chr5 172121643 172123133 -27507017 + L1MC1 LINE L1 4353 5692 -641 1565 170 56 7 chr5 172123133 172123403 -27506747 + AluSx SINE Alu 16 298 -14 4049 167 47 106 chr5 172123403 172123964 -27506186 + L1MC1 LINE L1 5692 6284 -49 451 258 171 67 chr5 172125319 172125617 -27504533 - MER102a DNA MER1_type -1 329 1 401 295 0 9 chr5 172125784 172125896 -27504254 + MER5A DNA MER1_type 7 117 -72 192 232 71 81 chr5 172126057 172126147 -27504003 - MIR SINE MIR -70 138 48 880 256 27 127 chr5 172127066 172127555 -27502595 + L2 LINE L2 2874 3313 0 223 274 78 0 chr5 172127584 172127635 -27502515 - L2 LINE L2 -62 3210 3156 2235 109 0 3 chr5 172128676 172128978 -27501172 - AluSg SINE Alu -9 301 1 327 299 21 10 chr5 172128983 172129080 -27501070 - MER5A DNA MER1_type -7 182 85 237 103 46 23 chr5 172129131 172129179 -27500971 - MIR SINE MIR -56 152 103 441 245 55 35 chr5 172129836 172130036 -27500114 - L2 LINE L2 -386 2928 2725 284 222 0 0 chr5 172130753 172130807 -27499343 + L2 LINE L2 3215 3268 -4 316 292 11 0 chr5 172130814 172130903 -27499247 + MIR3 SINE MIR 113 202 -6 241 216 59 0 chr5 172131026 172131077 -27499073 - L2 LINE L2 -22 3291 3238 515 255 41 87 chr5 172131088 172131163 -27498987 + MER5A DNA MER1_type 1 78 -111 1729 128 69 11 chr5 172131163 172131437 -27498713 + AluJo SINE Alu 1 290 -22 515 255 41 87 chr5 172131437 172131557 -27498593 + MER5A DNA MER1_type 78 187 -2 297 161 32 145 chr5 172131621 172131745 -27498405 - MER102b DNA MER1_type 0 341 232 212 310 0 0 chr5 172131911 172131969 -27498181 + L2 LINE L2 3251 3308 -5 34 65 0 0 chr5 172132509 172132571 -27497579 + AT_rich Low_complexity Low_complexity 1 62 0 2285 138 37 105 chr5 172132630 172132684 -27497466 + MSTB LTR MaLR 1 57 -369 2275 119 0 0 chr5 172132684 172132994 -27497156 + AluSx SINE Alu 1 310 -2 2285 138 37 105 chr5 172132994 172133396 -27496754 + MSTB LTR MaLR 57 426 0 1866 120 25 11 chr5 172133423 172133706 -27496444 - MER1B DNA MER1_type 0 339 53 629 268 21 10 chr5 172133966 172134160 -27495990 + MER117 DNA MER1_type 1 196 -1 3067 169 57 2 chr5 172134248 172134779 -27495371 + MER68 LTR ERV1 3 562 0 233 325 148 15 chr5 172135152 172135355 -27494795 + MIR SINE MIR 28 257 -5 326 309 149 6 chr5 172136066 172136241 -27493909 - MIR SINE MIR -18 244 45 3588 152 58 10 chr5 172136376 172136983 -27493167 - L1PA16 LINE L1 -13 6153 5518 2128 134 0 3 chr5 172137532 172137830 -27492320 - AluSx SINE Alu -15 297 1 239 67 0 0 chr5 172137862 172137892 -27492258 + MIR SINE MIR 115 144 -64 324 270 57 11 chr5 172138647 172138745 -27491405 - MER5A DNA MER1_type -62 125 15 383 241 23 0 chr5 172138801 172138888 -27491262 - L2 LINE L2 0 3313 3225 2649 74 0 34 chr5 172138975 172139326 -27490824 - L1PA7 LINE L1 0 6154 5816 619 40 0 0 chr5 172139326 172139401 -27490749 + L1PA7 LINE L1 5735 5809 -363 2259 121 0 3 chr5 172139640 172139953 -27490197 + AluSx SINE Alu 1 312 0 285 29 0 0 chr5 172139958 172139992 -27490158 + (TA)n Simple_repeat Simple_repeat 2 35 0 468 256 45 28 chr5 172140284 172140443 -27489707 - MER5A DNA MER1_type -15 163 16 383 324 44 0 chr5 172140713 172140849 -27489301 - MIR3 SINE MIR -51 157 16 213 39 0 0 chr5 172141306 172141332 -27488818 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 868 233 39 11 chr5 172141334 172141514 -27488636 - AluJo SINE Alu -19 293 109 21 57 0 0 chr5 172141693 172141728 -27488422 + AT_rich Low_complexity Low_complexity 1 35 0 433 216 82 8 chr5 172141826 172141960 -27488190 + L1MC5 LINE L1 7810 7953 -8 236 221 44 29 chr5 172142507 172142575 -27487575 + MER117 DNA MER1_type 13 81 -116 280 287 65 19 chr5 172142683 172142791 -27487359 - MIR3 SINE MIR -46 162 50 4344 201 64 68 chr5 172143571 172144000 -27486150 - L1MC4 LINE L1 0 8042 7613 2134 113 3 3 chr5 172144000 172144291 -27485859 - AluSp SINE Alu -22 291 1 4344 201 64 68 chr5 172144291 172144996 -27485154 - L1MC4 LINE L1 -429 7613 6911 1760 172 30 7 chr5 172144996 172145292 -27484858 + AluJb SINE Alu 3 305 -7 4344 201 64 68 chr5 172145292 172145460 -27484690 - L1MC4 LINE L1 -1131 6911 6744 2371 82 0 32 chr5 172145783 172146099 -27484051 + AluSg SINE Alu 1 306 -4 220 325 26 0 chr5 172146673 172146750 -27483400 + MIR3 SINE MIR 95 173 -35 1710 148 3 69 chr5 172146802 172147134 -27483016 + AluJb SINE Alu 1 312 0 355 268 78 42 chr5 172147315 172147457 -27482693 - MER117 DNA MER1_type -49 148 2 269 246 49 57 chr5 172147632 172147754 -27482396 - MIR SINE MIR -50 212 92 288 243 48 176 chr5 172148502 172148626 -27481524 + L1MC4a LINE L1 5518 5656 -2152 1762 199 0 3 chr5 172148626 172148928 -27481222 + AluJb SINE Alu 1 301 -11 288 243 48 176 chr5 172148928 172149136 -27481014 + L1MC4a LINE L1 5656 5783 -2025 2143 96 0 17 chr5 172149136 172149428 -27480722 - AluSx SINE Alu -25 287 1 288 243 48 176 chr5 172149428 172149531 -27480619 + L1MC4a LINE L1 5783 5898 -1910 2125 128 0 0 chr5 172149623 172149920 -27480230 - AluSx SINE Alu -15 297 1 396 289 66 5 chr5 172150107 172150304 -27479846 + L1ME4a LINE L1 5678 5886 -235 363 255 38 9 chr5 172151445 172151551 -27478599 - MIR3 SINE MIR -8 200 92 995 92 0 23 chr5 172151922 172152052 -27478098 - FLAM_C SINE Alu -5 128 2 1568 197 130 48 chr5 172152422 172152884 -27477266 + MER20B DNA MER1_type 173 672 -111 1057 156 0 0 chr5 172152886 172153059 -27477091 + AluJo SINE Alu 124 296 -16 564 208 0 8 chr5 172153078 172153203 -27476947 + MER20B DNA MER1_type 659 782 -1 2321 117 0 0 chr5 172154509 172154817 -27475333 + AluSq SINE Alu 1 308 -5 907 196 0 12 chr5 172154967 172155135 -27475015 - MER5A DNA MER1_type -21 168 3 206 316 0 13 chr5 172155174 172155250 -27474900 + MIR SINE MIR 71 145 -63 1893 143 3 17 chr5 172155394 172155695 -27474455 - AluJo SINE Alu -10 302 6 208 191 0 43 chr5 172156617 172156664 -27473486 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 248 121 72 12 chr5 172156670 172156753 -27473397 + CT-rich Low_complexity Low_complexity 2 89 0 328 318 78 26 chr5 172156869 172157023 -27473127 + L3 LINE CR1 1352 1513 -64 215 288 100 0 chr5 172157150 172157230 -27472920 + MIR SINE MIR 32 119 -89 276 252 93 73 chr5 172157471 172157622 -27472528 - MIR SINE MIR -4 258 105 397 281 29 82 chr5 172158097 172158268 -27471882 - MIR3 SINE MIR -9 199 38 579 229 159 6 chr5 172159248 172159405 -27470745 - MER5A DNA MER1_type 0 189 9 278 308 63 56 chr5 172159924 172160067 -27470083 + MIR3 SINE MIR 34 177 -31 1846 153 0 14 chr5 172160245 172160526 -27469624 + AluJo SINE Alu 5 281 -31 2162 135 26 35 chr5 172160526 172160903 -27469247 + THE1C LTR MaLR 2 375 0 196 224 0 82 chr5 172160941 172160990 -27469160 + MIR3 SINE MIR 152 196 -12 1477 129 39 126 chr5 172161051 172161384 -27468766 - AluJb SINE Alu -8 304 1 332 247 22 107 chr5 172161478 172161656 -27468494 - MIR SINE MIR -67 195 33 580 260 160 18 chr5 172161671 172161890 -27468260 - MIR SINE MIR 0 262 13 547 256 44 56 chr5 172162019 172162199 -27467951 - MIR SINE MIR -81 181 4 593 156 10 0 chr5 172162200 172162296 -27467854 - MER58 DNA MER1_type -1 2419 2323 777 193 28 80 chr5 172163005 172163139 -27467011 - L1MD3 LINE L1 -1 7994 7873 2227 8 0 0 chr5 172163139 172163375 -27466775 + L1PA2 LINE L1 5916 6151 -4 777 193 28 80 chr5 172163375 172163452 -27466698 - L1MD3 LINE L1 -122 7873 7794 814 246 50 10 chr5 172163717 172163731 -27466419 + MER3 DNA MER1_type 1 13 -196 2077 95 0 0 chr5 172163731 172163995 -27466155 + AluSg SINE Alu 33 296 -14 814 246 50 10 chr5 172163995 172164179 -27465971 + MER3 DNA MER1_type 13 207 -2 2123 102 20 3 chr5 172164576 172164869 -27465281 - AluSg SINE Alu -12 298 1 2678 180 11 34 chr5 172165939 172166243 -27463907 + Ricksha DNA DNA 91 379 -2867 2178 99 23 0 chr5 172166243 172166545 -27463605 + AluSx SINE Alu 1 309 -3 2678 180 11 34 chr5 172166545 172166767 -27463383 + Ricksha DNA DNA 379 605 -2641 475 169 0 13 chr5 172166756 172166833 -27463317 + Ricksha DNA DNA 2798 2873 -378 * 509 208 68 0 chr5 172166886 172167007 -27463143 - L1ME1 LINE L1 -1 6183 6048 5107 168 17 17 chr5 172167008 172167667 -27462483 + L1P LINE L1 3122 3783 -2363 1709 136 86 4 chr5 172167667 172167946 -27462204 + AluJb SINE Alu 1 302 -10 5107 168 17 17 chr5 172167946 172168242 -27461908 + L1P LINE L1 3782 4077 -2069 1632 126 27 14 chr5 172168242 172168535 -27461615 + Ricksha DNA DNA 2533 2829 -25 419 235 68 86 chr5 172168571 172168792 -27461358 + MIR SINE MIR 7 223 -39 2263 109 0 0 chr5 172169192 172169494 -27460656 - AluY SINE Alu -3 308 7 930 121 8 0 chr5 172169507 172169639 -27460511 - AluSq/x SINE Alu -180 133 1 1262 204 25 21 chr5 172169639 172169919 -27460231 + AluJo SINE Alu 27 307 -5 223 314 93 34 chr5 172170425 172170543 -27459607 + L2 LINE L2 3125 3249 -23 460 324 139 53 chr5 172170612 172170986 -27459164 - L2 LINE L2 0 3272 2867 689 148 35 14 chr5 172171056 172171198 -27458952 - Charlie5 DNA MER1_type -33 2579 2435 3817 133 28 12 chr5 172171201 172171405 -27458745 + L1PA15 LINE L1 5578 5777 -388 2026 138 3 0 chr5 172171405 172171711 -27458439 + AluSx SINE Alu 1 307 0 3817 133 28 12 chr5 172171711 172172078 -27458072 + L1PA15 LINE L1 5777 6159 -6 1220 265 33 46 chr5 172172082 172172321 -27457829 - L1M4 LINE L1 -1828 4318 4077 2194 122 14 0 chr5 172172321 172172617 -27457533 + AluSx SINE Alu 1 300 -12 1220 265 33 46 chr5 172172617 172172921 -27457229 - L1M4 LINE L1 -2069 4077 3782 452 159 156 113 chr5 172172928 172173103 -27457047 - MER33 DNA MER1_type -250 74 1 299 211 0 13 chr5 172173790 172173866 -27456284 + CT-rich Low_complexity Low_complexity 2 76 0 298 259 264 10 chr5 172174116 172174309 -27455841 - MIR SINE MIR -13 249 8 371 356 45 17 chr5 172174647 172174824 -27455326 + MIR SINE MIR 4 185 -77 1534 188 19 7 chr5 172174861 172175160 -27454990 + AluJb SINE Alu 9 310 0 233 146 21 0 chr5 172175583 172175631 -27454519 + A-rich Low_complexity Low_complexity 2 50 0 652 189 0 0 chr5 172175772 172175883 -27454267 - FLAM_C SINE Alu 0 143 33 232 217 0 14 chr5 172175883 172175952 -27454198 + L1ME4a LINE L1 6043 6110 -11 386 211 26 59 chr5 172175998 172176150 -27454000 + L1ME LINE L1 5644 5790 -331 560 301 134 28 chr5 172177402 172178146 -27452004 + L1MB4 LINE L1 5271 5857 -323 1612 275 70 29 chr5 172177456 172177751 -27452399 + L1MC4a LINE L1 5352 5633 -2175 1399 173 14 0 chr5 172177751 172177965 -27452185 - MER20 DNA MER1_type -2 217 1 1612 275 70 29 chr5 172177965 172178352 -27451798 + L1MC4a LINE L1 5633 6062 -1746 21 0 0 0 chr5 172178428 172178449 -27451701 + AT_rich Low_complexity Low_complexity 1 21 0 282 95 0 0 chr5 172178833 172178875 -27451275 + MADE1 DNA Mariner 39 80 0 470 265 25 12 chr5 172179011 172179173 -27450977 + MER113 DNA MER1_type? 1 164 -357 222 309 57 32 chr5 172179873 172179996 -27450154 + MIR SINE MIR 89 214 -48 433 292 16 38 chr5 172180280 172180465 -27449685 + MIR SINE MIR 82 262 0 1623 174 4 22 chr5 172180697 172180972 -27449178 - AluJo SINE Alu -30 282 13 309 234 39 13 chr5 172180987 172181064 -27449086 - MIR3 SINE MIR -24 184 106 26 30 0 0 chr5 172181269 172181302 -27448848 + AT_rich Low_complexity Low_complexity 1 33 0 213 286 91 13 chr5 172181313 172181390 -27448760 - MIR3 SINE MIR -44 164 82 320 297 72 36 chr5 172181943 172182138 -27448012 + L1ME LINE L1 5557 5758 -363 610 69 0 0 chr5 172182690 172182802 -27447348 + AluSg/x SINE Alu 210 321 0 486 298 105 42 chr5 172182857 172183371 -27446779 + L2 LINE L2 2610 3163 -109 277 111 270 0 chr5 172183372 172183435 -27446715 + MADE1 DNA Mariner 1 80 0 356 313 0 0 chr5 172183449 172183532 -27446618 + L2 LINE L2 3190 3272 0 2037 156 0 3 chr5 172184211 172184518 -27445632 - AluSx SINE Alu -4 308 3 494 250 0 77 chr5 172184896 172185052 -27445098 - L2 LINE L2 -1 3312 3169 793 197 95 0 chr5 172185139 172185301 -27444849 + AluJb SINE Alu 132 306 0 334 143 299 0 chr5 172185346 172185423 -27444727 - MER96 DNA MER1_type? -75 100 1 510 309 99 30 chr5 172185423 172185727 -27444423 - L2 LINE L2 -372 2942 2618 1662 173 30 33 chr5 172185816 172186116 -27444034 + AluJb SINE Alu 1 299 -13 243 303 24 147 chr5 172186533 172186866 -27443284 - L2 LINE L2 -1 3271 2980 252 0 0 0 chr5 172187205 172187233 -27442917 + (TC)n Simple_repeat Simple_repeat 2 29 0 2104 122 0 3 chr5 172187233 172187520 -27442630 - AluSq SINE Alu -24 289 4 655 279 41 0 chr5 172187818 172187990 -27442160 + MIR SINE MIR 83 261 -1 1821 169 7 0 chr5 172188057 172188352 -27441798 - AluJb SINE Alu -15 297 1 2100 121 3 14 chr5 172188376 172188673 -27441477 + AluSg SINE Alu 1 294 -16 250 310 80 10 chr5 172188692 172188792 -27441358 - MIR SINE MIR -144 118 12 391 254 51 0 chr5 172189187 172189305 -27440845 - MIR SINE MIR -70 192 69 726 235 65 55 chr5 172189502 172189702 -27440448 - MER63A DNA MER1_type -4 206 5 273 173 39 0 chr5 172190534 172190586 -27439564 - MIR SINE MIR -92 170 117 30 83 0 0 chr5 172190750 172190822 -27439328 + AT_rich Low_complexity Low_complexity 1 72 0 299 342 123 32 chr5 172191840 172192027 -27438123 - MIR3 SINE MIR -4 204 1 198 344 0 0 chr5 172192336 172192400 -27437750 + MIR3 SINE MIR 103 166 -42 400 278 0 37 chr5 172193309 172193417 -27436733 + L2 LINE L2 3165 3268 -4 401 267 23 46 chr5 172193616 172193747 -27436403 + MIR SINE MIR 2 129 -133 21 36 0 0 chr5 172193921 172193949 -27436201 + AT_rich Low_complexity Low_complexity 1 28 0 1779 253 71 6 chr5 172194174 172194640 -27435510 + MLT1J LTR MaLR 1 496 -15 2053 195 56 139 chr5 172195005 172195739 -27434411 + L1MC5 LINE L1 6876 7669 -292 1826 162 30 0 chr5 172195739 172196041 -27434109 + AluJb SINE Alu 1 311 -1 2053 195 56 139 chr5 172196041 172196227 -27433923 + L1MC5 LINE L1 7669 7655 -306 2237 123 0 0 chr5 172196227 172196527 -27433623 + AluSx SINE Alu 1 300 -12 2053 195 56 139 chr5 172196527 172196779 -27433371 + L1MC5 LINE L1 7654 7925 -36 2236 101 7 10 chr5 172196797 172197122 -27433028 + AluSq SINE Alu 1 313 0 822 185 0 15 chr5 172197627 172197762 -27432388 + AluJo/FLAM SINE Alu 1 133 -169 2161 133 0 0 chr5 172197764 172198064 -27432086 + AluSx SINE Alu 1 300 -12 767 238 104 96 chr5 172198610 172199037 -27431113 - MLT1K LTR MaLR -117 471 18 239 368 66 0 chr5 172199147 172199283 -27430867 - L3 LINE CR1 -350 1227 1083 479 248 101 85 chr5 172199355 172199422 -27430728 + L1MC4a LINE L1 5644 5708 -413 2313 93 0 3 chr5 172199422 172199722 -27430428 - AluSc SINE Alu -10 299 1 479 248 101 85 chr5 172199722 172199912 -27430238 + L1MC4a LINE L1 5708 5905 -216 319 248 150 8 chr5 172200258 172200391 -27429759 - L1ME4a LINE L1 -5 6116 5965 2104 113 3 0 chr5 172200480 172200771 -27429379 - AluSx SINE Alu -20 292 1 502 242 0 32 chr5 172201906 172202030 -27428120 + LTR37B LTR ERV1 6 125 -343 643 191 21 21 chr5 172202087 172202228 -27427922 - L1MB7 LINE L1 -10 6174 6034 315 104 0 0 chr5 172202353 172202401 -27427749 + (CA)n Simple_repeat Simple_repeat 2 49 0 1178 257 52 101 chr5 172202532 172203027 -27427123 + L2 LINE L2 2502 3019 -294 1528 190 0 11 chr5 172203027 172203296 -27426854 + AluJo SINE Alu 1 266 -46 8153 94 5 19 chr5 172203301 172204383 -27425767 - MER11C LTR ERVK -4 1067 1 1178 257 52 101 chr5 172204383 172204721 -27425429 + L2 LINE L2 3023 3313 0 1862 156 0 23 chr5 172204873 172205180 -27424970 - AluJb SINE Alu -8 304 5 1512 158 54 14 chr5 172205234 172205513 -27424637 + AluJb SINE Alu 1 290 -22 26 0 0 0 chr5 172205570 172205596 -27424554 + AT_rich Low_complexity Low_complexity 1 26 0 822 211 91 23 chr5 172205603 172205778 -27424372 - AluJo SINE Alu -124 188 2 266 196 0 18 chr5 172206190 172206246 -27423904 - L2 LINE L2 -17 3255 3201 183 80 0 0 chr5 172206378 172206403 -27423747 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 184 220 160 0 chr5 172206686 172206736 -27423414 + MIR SINE MIR 87 144 -64 2084 122 7 10 chr5 172206761 172207057 -27423093 + AluSq SINE Alu 1 295 -18 277 196 122 65 chr5 172207170 172207277 -27422873 - L2 LINE L2 -3 3269 3157 279 286 41 34 chr5 172207281 172207428 -27422722 + L1ME LINE L1 5633 5780 -341 303 286 99 0 chr5 172208558 172208649 -27421501 - L3 LINE CR1 -28 1549 1450 1059 159 53 6 chr5 172208686 172208856 -27421294 - L1PB4 LINE L1 -3 6153 5976 1387 104 5 45 chr5 172208887 172209089 -27421061 - AluSq SINE Alu -21 292 99 202 304 0 0 chr5 172209128 172209184 -27420966 - L3 LINE CR1 -196 1381 1326 243 288 15 15 chr5 172209242 172209308 -27420842 + L1MC4a LINE L1 5589 5654 -2154 209 309 49 0 chr5 172209368 172209449 -27420701 + L3 LINE CR1 1437 1521 -56 2229 115 0 6 chr5 172209464 172209776 -27420374 + AluSx SINE Alu 1 310 -2 2000 148 0 19 chr5 172209824 172210142 -27420008 - AluSx SINE Alu 0 312 1 1101 227 23 5 chr5 172211991 172212211 -27417939 + MER58A DNA MER1_type 1 224 0 238 264 60 64 chr5 172212232 172212446 -27417704 + L1MC4a LINE L1 5635 5760 -410 1957 159 0 3 chr5 172212446 172212747 -27417403 - AluSx SINE Alu -12 300 1 238 264 60 64 chr5 172212747 172212930 -27417220 + L1MC4a LINE L1 5760 5942 -228 573 193 79 7 chr5 172213120 172213260 -27416890 + HsTC2 DNA Tc2 1647 1796 -102 536 282 139 19 chr5 172214563 172214829 -27415321 - L2 LINE L2 -339 2975 2678 2234 99 10 0 chr5 172214963 172215265 -27414885 + AluSx SINE Alu 1 305 -7 1251 310 81 2 chr5 172215281 172215691 -27414459 + LTR16A LTR ERVL 9 450 0 3239 208 84 36 chr5 172215929 172216205 -27413945 + L1MC1 LINE L1 23 284 -6256 275 0 0 28 chr5 172216205 172216241 -27413909 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 3239 208 84 36 chr5 172216241 172217371 -27412779 + L1MC1 LINE L1 284 1726 -4814 1400 157 38 46 chr5 172217375 172217636 -27412514 + AluJb SINE Alu 46 304 -8 4074 189 59 14 chr5 172217648 172219092 -27411058 + L1MC1 LINE L1 1739 3244 -3296 787 243 32 22 chr5 172219155 172219340 -27410810 + AluJo SINE Alu 118 304 -8 2087 155 0 0 chr5 172219433 172219743 -27410407 - AluSx SINE Alu -2 310 1 1494 194 27 50 chr5 172219747 172220387 -27409763 + L1MC1 LINE L1 5360 5980 -656 1776 107 0 8 chr5 172220387 172220630 -27409520 - AluSg/x SINE Alu -5 307 67 494 214 0 0 chr5 172220630 172220714 -27409436 + AluJb SINE Alu 167 250 -62 844 205 39 48 chr5 172220715 172220944 -27409206 + AluJo SINE Alu 86 312 0 1931 168 48 6 chr5 172220958 172221315 -27408835 + L1MC1 LINE L1 6356 6727 0 863 127 0 0 chr5 172221331 172221449 -27408701 + AluJb SINE Alu 1 118 -194 2002 121 61 0 chr5 172221468 172221748 -27408402 + AluSx SINE Alu 1 297 -15 26 0 0 0 chr5 172222015 172222041 -27408109 + AT_rich Low_complexity Low_complexity 1 26 0 273 290 0 0 chr5 172222633 172222702 -27407448 + L2 LINE L2 3197 3265 -7 1226 133 20 10 chr5 172222707 172222903 -27407247 + AluJb SINE Alu 89 286 -26 240 147 70 6 chr5 172222963 172223119 -27407031 + (TA)n Simple_repeat Simple_repeat 2 167 0 292 118 27 173 chr5 172223255 172223290 -27406860 - MER96B DNA MER1_type? -234 183 145 1758 107 9 0 chr5 172223290 172223523 -27406627 + AluSp SINE Alu 1 235 -78 292 118 27 173 chr5 172223523 172223597 -27406553 - MER96B DNA MER1_type? -272 145 90 1211 120 0 0 chr5 172223597 172223764 -27406386 - AluSp SINE Alu -10 303 137 427 189 56 0 chr5 172223766 172223856 -27406294 + MER96B DNA MER1_type? 323 417 0 2200 118 0 0 chr5 172224288 172224585 -27405565 - AluSx SINE Alu -15 297 1 446 167 71 12 chr5 172225088 172225172 -27404978 + AluY SINE Alu 2 90 -228 1669 218 44 47 chr5 172225222 172225630 -27404520 + LTR2 LTR ERV1 41 447 -2 1664 149 4 0 chr5 172225630 172225879 -27404271 + AluSx SINE Alu 53 302 -10 2310 94 19 0 chr5 172225957 172226264 -27403886 - AluSp SINE Alu 0 313 1 634 149 313 15 chr5 172226277 172226411 -27403739 - FAM SINE Alu -1 174 1 1687 195 30 46 chr5 172226561 172227063 -27403087 + L1MC/D LINE L1 4904 5397 -749 3296 226 54 17 chr5 172227171 172228059 -27402091 + L1ME1 LINE L1 5239 6161 -5 394 282 135 76 chr5 172228175 172228633 -27401517 + L2 LINE L2 2823 3307 -6 267 295 0 16 chr5 172228795 172228856 -27401294 + MIR SINE MIR 20 79 -129 243 253 25 38 chr5 172228869 172228948 -27401202 + L1MC/D LINE L1 5611 5688 -2120 730 264 118 84 chr5 172229099 172229432 -27400718 - L2 LINE L2 -6 3307 2987 2585 58 0 3 chr5 172229432 172229744 -27400406 + AluY SINE Alu 1 311 0 730 264 118 84 chr5 172229744 172230197 -27399953 - L2 LINE L2 -326 2987 2395 198 189 0 0 chr5 172230285 172230322 -27399828 - L2 LINE L2 -1158 2156 2120 364 203 203 8 chr5 172230323 172230441 -27399709 - L2 LINE L2 -1330 1984 1844 1605 146 54 27 chr5 172230512 172230806 -27399344 + AluSx SINE Alu 3 304 -8 328 186 142 44 chr5 172231626 172231739 -27398411 + MIR SINE MIR 24 147 -61 277 293 69 43 chr5 172231808 172231924 -27398226 + MER5B DNA MER1_type 1 119 -59 404 320 13 13 chr5 172232152 172232302 -27397848 + MIR SINE MIR 21 170 -92 2083 116 0 7 chr5 172232305 172232607 -27397543 + AluSx SINE Alu 7 306 -6 2272 88 0 0 chr5 172232811 172233105 -27397045 + AluY SINE Alu 2 295 -16 653 184 296 14 chr5 172233115 172233338 -27396812 + L1MC4 LINE L1 7751 8036 -6 1543 136 9 0 chr5 172233350 172233570 -27396580 + AluJb SINE Alu 3 224 -88 2066 109 10 26 chr5 172233876 172234178 -27395972 + AluSx SINE Alu 1 297 -15 249 252 126 16 chr5 172234402 172234529 -27395621 - L2 LINE L2 -1537 1777 1637 628 247 101 87 chr5 172236194 172236550 -27393600 + MLT1J1 LTR MaLR 3 363 -83 724 147 13 207 chr5 172236660 172236892 -27393258 + MER5A DNA MER1_type 3 189 0 2233 101 7 3 chr5 172236893 172237190 -27392960 + AluSp SINE Alu 1 298 -15 2125 109 11 0 chr5 172237330 172237613 -27392537 + AluSq SINE Alu 1 286 -27 219 139 0 0 chr5 172237613 172237649 -27392501 + (TATG)n Simple_repeat Simple_repeat 1 36 0 853 157 0 8 chr5 172238116 172238250 -27391900 + FLAM_C SINE Alu 1 133 -10 391 261 49 42 chr5 172238474 172238616 -27391534 - MER5B DNA MER1_type -29 149 7 303 233 55 0 chr5 172238619 172238692 -27391458 - MLT1K LTR MaLR 0 588 512 296 233 22 33 chr5 172238692 172238709 -27391441 - LTR67 LTR ERVL 0 557 469 722 222 0 0 chr5 172238711 172238828 -27391322 + FLAM_C SINE Alu 1 117 -16 2417 86 0 16 chr5 172239650 172239964 -27390186 - AluSc SINE Alu 0 309 1 876 138 46 23 chr5 172239970 172240100 -27390050 - FLAM_C SINE Alu 0 133 1 1542 205 14 3 chr5 172240133 172240426 -27389724 + AluJo SINE Alu 2 297 -15 234 268 0 0 chr5 172240751 172240807 -27389343 - MIR SINE MIR -45 217 162 726 302 9 9 chr5 172240847 172241069 -27389081 - MIR SINE MIR -39 223 2 245 371 22 11 chr5 172241095 172241184 -27388966 - MIR SINE MIR -171 91 2 214 222 189 11 chr5 172241291 172241381 -27388769 - MIR SINE MIR -67 195 90 1239 207 102 0 chr5 172241394 172241689 -27388461 - MER58B DNA MER1_type 0 341 17 356 92 123 0 chr5 172241833 172241898 -27388252 - L1MA7 LINE L1 0 6291 6219 251 253 116 53 chr5 172242079 172242174 -27387976 + MER21B LTR ERV1 682 782 -81 2131 106 0 20 chr5 172242235 172242372 -27387778 + AluSq SINE Alu 2 140 -173 1946 45 0 0 chr5 172242372 172242595 -27387555 + AluY SINE Alu 78 300 -11 2131 106 0 20 chr5 172242595 172242758 -27387392 + AluSq SINE Alu 140 296 -17 540 60 36 36 chr5 172242873 172242957 -27387193 - L1PA7 LINE L1 0 6154 6071 285 323 39 8 chr5 172243268 172243398 -27386752 + L1M4 LINE L1 3418 3551 -2595 210 122 0 49 chr5 172243416 172243457 -27386693 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 334 254 70 18 chr5 172243457 172243494 -27386656 + L1M4 LINE L1 3528 3562 -2584 222 105 0 0 chr5 172243494 172243532 -27386618 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 334 254 70 18 chr5 172243532 172243608 -27386542 + L1M4 LINE L1 3562 3647 -2499 1180 264 112 44 chr5 172243609 172243787 -27386363 + L1M4 LINE L1 3740 3904 -2242 1952 130 0 24 chr5 172243787 172244103 -27386047 + AluSx SINE Alu 1 309 0 1180 264 112 44 chr5 172244103 172244511 -27385639 + L1M4 LINE L1 3904 4367 -1779 1142 127 0 0 chr5 172244515 172244673 -27385477 + AluSp SINE Alu 136 293 -20 5446 194 86 29 chr5 172244678 172244771 -27385379 - L1M2 LINE L1 -743 5403 5317 1448 152 156 11 chr5 172244771 172245034 -27385116 - AluSg1 SINE Alu -6 303 3 5446 194 86 29 chr5 172245034 172245300 -27384850 - L1M2 LINE L1 -829 5317 5068 2199 128 0 0 chr5 172245300 172245606 -27384544 - AluSx SINE Alu -6 306 1 5446 194 86 29 chr5 172245606 172246130 -27384020 - L1M2 LINE L1 -1078 5068 4575 2332 97 0 3 chr5 172246130 172246438 -27383712 + AluY SINE Alu 1 307 -4 5446 194 86 29 chr5 172246438 172246915 -27383235 - L1M2 LINE L1 -1571 4575 4127 1589 184 34 10 chr5 172246915 172247209 -27382941 - AluJo SINE Alu -11 301 1 5446 194 86 29 chr5 172247209 172247687 -27382463 - L1M2 LINE L1 -2019 4127 3505 637 212 7 48 chr5 172248302 172248448 -27381702 - FLAM_C SINE Alu -1 142 3 556 161 71 0 chr5 172248461 172248573 -27381577 - L1M2 LINE L1 -2647 3499 3380 429 171 0 0 chr5 172248569 172248651 -27381499 - L1M2 LINE L1 -3756 2390 2309 * 233 135 0 0 chr5 172248655 172248692 -27381458 - L1 LINE L1 -2778 4070 4034 2098 130 3 0 chr5 172248703 172249003 -27381147 + AluSq SINE Alu 1 301 -12 746 182 0 53 chr5 172249022 172249154 -27380996 - FLAM_C SINE Alu -7 126 2 1011 185 112 0 chr5 172249154 172249440 -27380710 - L1 LINE L1 -2801 4047 3730 315 179 0 15 chr5 172249485 172249498 -27380652 - L1 LINE L1 -3090 3758 3746 1578 159 18 61 chr5 172249498 172249824 -27380326 - AluJo SINE Alu 0 312 1 315 179 0 15 chr5 172249824 172249877 -27380273 - L1 LINE L1 -3102 3746 3693 569 120 0 70 chr5 172249877 172249977 -27380173 + AluSg/x SINE Alu 213 305 -5 398 205 0 0 chr5 172249977 172250055 -27380095 - L1 LINE L1 -3143 3705 3628 249 33 0 0 chr5 172250063 172250093 -27380057 + (TA)n Simple_repeat Simple_repeat 2 31 0 2244 107 0 7 chr5 172250093 172250384 -27379766 - AluSx SINE Alu -23 289 1 2299 213 84 6 chr5 172250394 172250488 -27379662 - L1 LINE L1 -3110 3738 3653 1518 166 43 7 chr5 172250488 172250806 -27379344 + AluJo SINE Alu 1 312 0 2299 213 84 6 chr5 172250806 172250971 -27379179 - L1 LINE L1 -3195 3653 3502 1769 124 4 34 chr5 172250971 172251238 -27378912 + AluSq SINE Alu 1 259 -54 2299 213 84 6 chr5 172251238 172251654 -27378496 - L1 LINE L1 -3346 3502 3009 454 211 57 0 chr5 172251663 172251786 -27378364 - L1 LINE L1 -4077 2772 2643 7251 215 35 33 chr5 172251861 172255157 -27374993 - L1M2 LINE L1 -3852 2936 15 1081 273 62 64 chr5 172255502 172255706 -27374444 + L1ME4a LINE L1 5188 5391 -779 2204 134 0 0 chr5 172255706 172256004 -27374146 + AluSx SINE Alu 1 298 -14 2156 134 0 10 chr5 172256005 172256318 -27373832 + AluSx SINE Alu 1 310 -2 1081 273 62 64 chr5 172256318 172256695 -27373455 + L1ME4a LINE L1 5391 5763 -407 1955 131 3 7 chr5 172256695 172256999 -27373151 + AluSx SINE Alu 1 303 0 1081 273 62 64 chr5 172256999 172257187 -27372963 + L1ME4a LINE L1 5763 5950 -220 248 152 22 0 chr5 172257293 172257339 -27372811 - Alu SINE Alu -166 136 90 870 226 128 0 chr5 172257339 172257534 -27372616 - AluJo SINE Alu -92 220 1 201 39 0 0 chr5 172257960 172257986 -27372164 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 1122 162 5 5 chr5 172258424 172258609 -27371541 + AluJo SINE Alu 1 185 -127 575 189 0 0 chr5 172258818 172258908 -27371242 + FRAM SINE Alu 62 151 -25 290 271 12 12 chr5 172259370 172259455 -27370695 + MLT1K LTR MaLR 146 230 -358 475 217 80 29 chr5 172259608 172259746 -27370404 + MLT1K LTR MaLR 422 566 -22 928 143 0 8 chr5 172260009 172260142 -27370008 + FLAM_C SINE Alu 2 133 0 266 234 80 44 chr5 172260142 172260279 -27369871 + L1ME4a LINE L1 5969 6110 -11 2268 59 4 0 chr5 172260794 172261065 -27369085 + AluY SINE Alu 1 272 -39 1991 143 27 3 chr5 172261115 172261408 -27368742 + AluSx SINE Alu 1 300 -12 739 253 71 55 chr5 172261477 172261916 -27368234 + L1MC5 LINE L1 7268 7713 -248 2243 96 0 7 chr5 172261929 172262222 -27367928 - AluSq SINE Alu -22 291 1 957 90 0 42 chr5 172262323 172262467 -27367683 + FLAM_C SINE Alu 6 143 0 1805 126 88 0 chr5 172262472 172262782 -27367368 + AluSq SINE Alu 1 333 0 2219 126 0 0 chr5 172262943 172263244 -27366906 + AluSg SINE Alu 1 301 -9 2423 103 0 0 chr5 172263573 172263884 -27366266 + AluSx SINE Alu 2 312 0 228 228 79 82 chr5 172264102 172264174 -27365976 + MIR3 SINE MIR 74 148 -60 2297 67 11 0 chr5 172264174 172264495 -27365655 + AluSp SINE Alu 1 324 0 228 228 79 82 chr5 172264495 172264544 -27365606 + MIR3 SINE MIR 148 196 -12 217 200 0 138 chr5 172265059 172265124 -27365026 - MIR3 SINE MIR -45 163 108 244 279 89 0 chr5 172265202 172265281 -27364869 + L2 LINE L2 3208 3293 -20 537 250 109 30 chr5 172265832 172266095 -27364055 + L1MC4a LINE L1 5639 5802 -353 2103 125 0 28 chr5 172266197 172266546 -27363604 - AluSx SINE Alu 0 340 1 28 86 0 0 chr5 172266617 172266687 -27363463 + AT_rich Low_complexity Low_complexity 1 70 0 493 169 226 8 chr5 172266718 172266842 -27363308 - MER4C LTR ERV1 -19 446 296 1005 153 61 52 chr5 172266902 172267200 -27362950 - MER4A LTR ERV1 -322 342 1 879 239 5 0 chr5 172267457 172267645 -27362505 + MER5A DNA MER1_type 1 189 0 2132 136 7 3 chr5 172268317 172268625 -27361525 + AluSq SINE Alu 3 311 -2 219 216 20 0 chr5 172268672 172268723 -27361427 + MER5B DNA MER1_type 1 52 -126 696 209 0 29 chr5 172268734 172268873 -27361277 + FLAM_C SINE Alu 2 136 -7 293 262 0 56 chr5 172268885 172268992 -27361158 + MER5B DNA MER1_type 78 178 0 395 287 85 12 chr5 172269037 172269201 -27360949 + MIR SINE MIR 23 198 -64 676 151 196 123 chr5 172269220 172269381 -27360769 + MER46A DNA MER2_type 2 185 -2546 2450 87 3 0 chr5 172269381 172269679 -27360471 + AluSp SINE Alu 1 299 -14 676 151 196 123 chr5 172269679 172269736 -27360414 + MER46A DNA MER2_type 185 236 0 732 291 46 0 chr5 172270875 172271116 -27359034 + MIR SINE MIR 11 262 0 2152 88 11 4 chr5 172271491 172271763 -27358387 - AluSq SINE Alu -16 297 24 417 342 60 60 chr5 172271973 172272292 -27357858 - L2 LINE L2 -5 3267 2949 331 289 125 8 chr5 172272565 172272693 -27357457 - MIR3 SINE MIR -32 176 34 194 272 16 80 chr5 172273396 172273521 -27356629 - MIR SINE MIR -90 172 56 480 130 0 30 chr5 172273565 172273665 -27356485 + (TTTC)n Simple_repeat Simple_repeat 4 100 0 1798 159 0 27 chr5 172273685 172273986 -27356164 - AluJo SINE Alu -11 301 9 278 321 28 0 chr5 172274360 172274469 -27355681 + L2 LINE L2 3200 3311 -2 320 209 11 22 chr5 172274735 172274826 -27355324 + (CGGGG)n Simple_repeat Simple_repeat 5 94 0 183 250 23 0 chr5 172277653 172277697 -27352453 + MIR SINE MIR 197 241 -21 224 407 23 0 chr5 172278984 172279161 -27350989 - L2 LINE L2 -1900 1414 1234 1198 248 95 10 chr5 172281116 172281527 -27348623 - HAL1 LINE L1 -4 2503 2058 2134 109 3 3 chr5 172281559 172281866 -27348284 - AluSq SINE Alu 0 307 1 382 246 164 0 chr5 172281939 172282061 -27348089 + MIR3 SINE MIR 53 194 -14 5637 183 82 35 chr5 172282866 172282930 -27347220 - L1MB8 LINE L1 -5 6173 6113 2239 108 17 0 chr5 172282930 172283227 -27346923 + AluSq SINE Alu 1 302 -11 5637 183 82 35 chr5 172283227 172284027 -27346123 - L1MB8 LINE L1 -65 6113 5352 802 146 24 0 chr5 172284027 172284150 -27346000 - FLAM_C SINE Alu -7 126 1 5637 183 82 35 chr5 172284150 172285604 -27344546 - L1MB8 LINE L1 -826 5352 3753 718 230 88 10 chr5 172285613 172285817 -27344333 - MIR SINE MIR -7 255 36 489 234 76 23 chr5 172285895 172286066 -27344084 - MER113 DNA MER1_type? -293 228 49 2235 121 10 0 chr5 172286102 172286408 -27343742 - AluSx SINE Alu -3 309 1 626 262 6 12 chr5 172286708 172286880 -27343270 + MER117 DNA MER1_type 1 171 -26 1882 112 37 7 chr5 172286906 172287175 -27342975 - MER7A DNA MER2_type -71 275 1 33 25 0 0 chr5 172287209 172287249 -27342901 + AT_rich Low_complexity Low_complexity 1 40 0 224 210 0 16 chr5 172287259 172287321 -27342829 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 350 339 8 8 chr5 172287523 172287647 -27342503 + MIR3 SINE MIR 9 132 -76 685 115 29 0 chr5 172287835 172287939 -27342211 + LTR54B LTR ERV1 1 107 -391 974 163 101 12 chr5 172287941 172288199 -27341951 + LTR54B LTR ERV1 216 496 -2 436 250 44 39 chr5 172288205 172288385 -27341765 - MIR SINE MIR -34 228 48 21 0 0 0 chr5 172288817 172288838 -27341312 + AT_rich Low_complexity Low_complexity 1 21 0 2040 92 0 88 chr5 172289526 172289831 -27340319 - AluSq SINE Alu -32 281 4 2021 225 108 46 chr5 172289946 172290836 -27339314 - L1MC5 LINE L1 -48 7913 6969 1811 283 94 19 chr5 172290969 172291387 -27338763 - L1MC4a LINE L1 -1582 6226 5841 2653 128 21 30 chr5 172291387 172291817 -27338333 - MSTB LTR MaLR 0 426 1 1811 283 94 19 chr5 172291817 172292189 -27337961 - L1MC4a LINE L1 -1967 5841 5377 530 261 96 14 chr5 172292407 172292625 -27337525 + MIR SINE MIR 27 262 0 24 0 0 0 chr5 172293355 172293379 -27336771 + AT_rich Low_complexity Low_complexity 1 24 0 352 301 31 57 chr5 172293598 172293947 -27336203 - L1MC4a LINE L1 -3203 2943 2604 25 51 0 0 chr5 172295519 172295558 -27334592 + AT_rich Low_complexity Low_complexity 1 39 0 258 203 0 0 chr5 172295640 172295699 -27334451 + L1MC4 LINE L1 6650 6708 -1334 * 342 274 49 53 chr5 172295665 172295859 -27334291 - L1ME4a LINE L1 -157 5964 5770 240 35 0 0 chr5 172295859 172295888 -27334262 + (TA)n Simple_repeat Simple_repeat 2 30 0 342 274 49 53 chr5 172295888 172295978 -27334172 - L1ME4a LINE L1 -351 5770 5681 1692 186 75 49 chr5 172297046 172297118 -27333032 - MSTD LTR MaLR 0 396 327 2003 152 0 0 chr5 172297118 172297407 -27332743 + AluJo SINE Alu 1 289 -23 1692 186 75 49 chr5 172297407 172297720 -27332430 - MSTD LTR MaLR -69 327 1 604 307 32 37 chr5 172297886 172298104 -27332046 - MIR SINE MIR -24 238 22 457 282 29 30 chr5 172298298 172298492 -27331658 - MIR SINE MIR -50 212 19 2190 151 5 56 chr5 172298690 172299101 -27331049 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr5 172299112 172299134 -27331016 + AT_rich Low_complexity Low_complexity 1 22 0 2328 185 48 42 chr5 172299453 172299950 -27330200 - MLT1D LTR MaLR -1 504 5 224 236 18 0 chr5 172300329 172300384 -27329766 - MIR3 SINE MIR -1 207 152 509 274 78 7 chr5 172300392 172300545 -27329605 - MER5B DNA MER1_type -9 169 6 256 349 18 9 chr5 172300736 172300845 -27329305 + L2 LINE L2 3163 3272 0 22 80 0 0 chr5 172301136 172301186 -27328964 + AT_rich Low_complexity Low_complexity 1 50 0 2308 155 72 108 chr5 172301239 172301514 -27328636 - L1MB7 LINE L1 -52 6132 5849 2448 99 3 0 chr5 172301514 172301826 -27328324 - AluSp SINE Alu 0 313 1 2308 155 72 108 chr5 172301826 172302189 -27327961 - L1MB7 LINE L1 -335 5849 5517 321 273 76 30 chr5 172302189 172302321 -27327829 - MIR SINE MIR -77 185 48 492 18 0 0 chr5 172302322 172302379 -27327771 + (TATG)n Simple_repeat Simple_repeat 4 60 0 2041 141 0 0 chr5 172302379 172302663 -27327487 - AluSx SINE Alu -28 284 1 2636 167 110 73 chr5 172302983 172303682 -27326468 - LTR8A LTR ERV1 0 727 3 391 288 164 7 chr5 172303860 172304006 -27326144 - MER5A DNA MER1_type -6 183 15 22 70 0 0 chr5 172304562 172304605 -27325545 + AT_rich Low_complexity Low_complexity 1 43 0 231 246 46 0 chr5 172304793 172304858 -27325292 - L1ME4a LINE L1 -93 6028 5961 240 310 52 32 chr5 172304965 172305120 -27325030 - L1ME4a LINE L1 -1969 5839 5682 404 168 19 93 chr5 172305540 172305616 -27324534 + MER94 DNA DNA 1 68 -66 1974 162 3 0 chr5 172305616 172305919 -27324231 + AluJb SINE Alu 1 304 -8 404 168 19 93 chr5 172305919 172305949 -27324201 + MER94 DNA DNA 68 99 -35 196 258 151 103 chr5 172306166 172306611 -27323539 - L2 LINE L2 0 3313 2848 318 287 111 28 chr5 172306632 172306848 -27323302 + MIR SINE MIR 16 249 -13 274 246 0 0 chr5 172306996 172307010 -27323140 + MER3 DNA MER1_type 34 47 -162 315 164 36 0 chr5 172307010 172307065 -27323085 - MER3 DNA MER1_type 0 209 153 205 77 51 26 chr5 172307081 172307120 -27323030 + A-rich Low_complexity Low_complexity 2 41 0 618 231 28 0 chr5 172307153 172307296 -27322854 - MER3 DNA MER1_type -55 154 8 207 217 67 0 chr5 172307413 172307473 -27322677 + CT-rich Low_complexity Low_complexity 2 65 0 845 182 5 75 chr5 172307526 172307647 -27322503 - L1MB8 LINE L1 0 6178 6077 1950 133 3 44 chr5 172307647 172307964 -27322186 - AluSx SINE Alu -8 304 1 845 182 5 75 chr5 172307964 172308056 -27322094 - L1MB8 LINE L1 -101 6077 5980 1052 181 34 1 chr5 172308165 172308389 -27321761 - L1MB8 LINE L1 -383 5795 5571 652 255 137 61 chr5 172308393 172308857 -27321293 + L2 LINE L2 2666 3188 -125 2124 111 7 4 chr5 172308857 172309162 -27320988 + AluSx SINE Alu 1 306 0 652 255 137 61 chr5 172309162 172309297 -27320853 + L2 LINE L2 3188 3311 -2 208 277 0 0 chr5 172309353 172309400 -27320750 - L2 LINE L2 -39 3233 3187 2349 103 0 13 chr5 172309489 172309800 -27320350 + AluSc SINE Alu 1 307 -2 643 260 168 38 chr5 172310460 172310829 -27319321 - MLT1K LTR MaLR -3 585 169 636 190 9 0 chr5 172310886 172311002 -27319148 + FLAM_C SINE Alu 1 117 -26 632 264 50 77 chr5 172312369 172312630 -27317520 + MIR SINE MIR 9 262 0 280 289 207 7 chr5 172313193 172313328 -27316822 + L3 LINE CR1 1356 1517 -60 493 277 157 19 chr5 172313717 172313984 -27316166 - L1ME4a LINE L1 -204 5917 5614 3643 124 25 5 chr5 172314002 172314566 -27315584 - L1PB2 LINE L1 0 6151 5577 321 200 47 100 chr5 172314658 172314753 -27315397 - L1ME4a LINE L1 -25 6096 6010 1720 168 0 14 chr5 172314753 172315050 -27315100 - AluJo SINE Alu -19 293 1 321 200 47 100 chr5 172315050 172315104 -27315046 - L1ME4a LINE L1 -111 6010 5955 1789 123 7 50 chr5 172315845 172316145 -27314005 + AluJb SINE Alu 12 298 -14 285 280 65 0 chr5 172316164 172316257 -27313893 - MIR3 SINE MIR -29 179 81 488 264 89 8 chr5 172316576 172316766 -27313384 + MIR SINE MIR 39 249 -13 420 20 0 0 chr5 172316872 172316921 -27313229 + (TG)n Simple_repeat Simple_repeat 1 49 0 432 290 26 13 chr5 172318109 172318264 -27311886 + MIR SINE MIR 46 202 -60 660 269 35 25 chr5 172318273 172318474 -27311676 + MIR SINE MIR 47 249 -13 278 143 20 0 chr5 172318722 172318771 -27311379 + MIR SINE MIR 81 130 -78 273 263 26 0 chr5 172320290 172320366 -27309784 + GA-rich Low_complexity Low_complexity 2 79 0 643 254 79 6 chr5 172321139 172321316 -27308834 + MIR SINE MIR 2 191 -71 21 0 0 0 chr5 172322103 172322124 -27308026 + AT_rich Low_complexity Low_complexity 1 21 0 806 176 8 0 chr5 172322124 172322255 -27307895 - FLAM_C SINE Alu -1 132 1 248 265 0 15 chr5 172322335 172322342 -27307808 + (TA)n Simple_repeat Simple_repeat 1 7 -60 2971 189 86 7 chr5 172322342 172322945 -27307205 + MER82 DNA MER2_type 3 653 0 248 265 0 15 chr5 172322945 172323005 -27307145 + (TA)n Simple_repeat Simple_repeat 7 67 0 328 207 132 33 chr5 172323057 172323178 -27306972 - MER112 DNA MER1_type -29 231 99 859 127 48 0 chr5 172323189 172323315 -27306835 + FLAM_C SINE Alu 1 132 -1 425 203 188 14 chr5 172323417 172323555 -27306595 + MIR SINE MIR 72 233 -29 1971 176 81 7 chr5 172323783 172324203 -27305947 - L1MB8 LINE L1 -1 6177 5727 894 309 61 25 chr5 172324520 172325056 -27305094 + L1ME4a LINE L1 5279 5800 -321 2032 125 0 13 chr5 172325056 172325360 -27304790 + AluSx SINE Alu 13 312 0 894 309 61 25 chr5 172325360 172325470 -27304680 + L1ME4a LINE L1 5800 5905 -216 222 291 12 0 chr5 172325477 172325563 -27304587 + (TA)n Simple_repeat Simple_repeat 1 87 0 374 175 193 28 chr5 172325861 172326021 -27304129 + MIR SINE MIR 23 207 -55 1473 259 59 43 chr5 172326614 172327263 -27302887 - HAL1 LINE L1 -110 2397 1739 1097 204 52 16 chr5 172327243 172327552 -27302598 - L1MB8 LINE L1 -775 5371 5052 * 194 232 196 0 chr5 172328654 172328710 -27301440 + MER5C DNA MER1_type 7 73 -251 626 266 62 6 chr5 172329335 172329528 -27300622 + MIR SINE MIR 62 261 -1 347 369 18 6 chr5 172329644 172329812 -27300338 - MER5A DNA MER1_type -5 184 15 369 250 112 9 chr5 172330204 172330320 -27299830 + MIR SINE MIR 19 146 -62 416 289 0 0 chr5 172330464 172330561 -27299589 + MIR3 SINE MIR 64 160 -48 735 230 17 0 chr5 172331376 172331554 -27298596 - MIR3 SINE MIR -5 203 23 269 89 22 0 chr5 172332088 172332133 -27298017 + (TC)n Simple_repeat Simple_repeat 1 46 0 200 311 44 22 chr5 172332264 172332354 -27297796 + L3b LINE CR1 1480 1571 -12 788 192 17 29 chr5 172332636 172332808 -27297342 - MIR3 SINE MIR -15 193 24 723 94 0 0 chr5 172333985 172334081 -27296069 - AluSg/x SINE Alu -14 295 200 1334 144 0 116 chr5 172334081 172334373 -27295777 - AluJb SINE Alu -54 258 1 838 291 145 15 chr5 172335680 172336079 -27294071 - MER115 DNA AcHobo -241 452 2 2272 95 0 0 chr5 172336516 172336812 -27293338 + AluSx SINE Alu 1 296 -16 455 297 53 112 chr5 172337411 172337744 -27292406 - L2 LINE L2 -54 3218 2881 216 213 16 49 chr5 172337744 172337805 -27292345 + MIR SINE MIR 145 203 -59 455 297 53 112 chr5 172337805 172338075 -27292075 - L2 LINE L2 -391 2881 2597 1477 161 75 0 chr5 172338776 172339056 -27291094 - MER33 DNA MER1_type -22 302 2 362 382 25 25 chr5 172339061 172339265 -27290885 + L2 LINE L2 2714 2917 -397 249 271 248 0 chr5 172339390 172339474 -27290676 + MIR SINE MIR 96 158 -104 426 20 0 0 chr5 172339474 172339525 -27290625 + (TG)n Simple_repeat Simple_repeat 2 52 0 249 271 248 0 chr5 172339525 172339573 -27290577 + MIR SINE MIR 158 261 -1 * 409 241 129 71 chr5 172339562 172339732 -27290418 + L2 LINE L2 3133 3312 -1 250 200 20 20 chr5 172341096 172341146 -27289004 + L2 LINE L2 3212 3261 -11 644 204 101 139 chr5 172341453 172341869 -27288281 - L1MC4 LINE L1 -17 8025 7626 1486 149 0 8 chr5 172341879 172342127 -27288023 - AluJo SINE Alu -14 298 53 1784 157 51 24 chr5 172342127 172342459 -27287691 - MER61A LTR ERV1 -2 341 1 402 140 0 0 chr5 172342459 172342516 -27287634 - AluJo SINE Alu -254 58 2 599 219 179 7 chr5 172343004 172343155 -27286995 + MER45A DNA AcHobo 2 178 0 406 216 78 0 chr5 172343313 172343415 -27286735 + L1MD3 LINE L1 7116 7225 -770 * 1114 166 141 17 chr5 172343385 172343660 -27286490 + L1MB3 LINE L1 5877 6173 -10 2427 204 102 7 chr5 172343679 172344266 -27285884 + L1MC4a LINE L1 7164 7806 -2 768 260 40 24 chr5 172344286 172344499 -27285651 + MIR SINE MIR 3 215 -47 1917 107 0 0 chr5 172344499 172344769 -27285381 - AluSg SINE Alu -2 308 39 768 260 40 24 chr5 172344769 172344814 -27285336 + MIR SINE MIR 215 258 -4 258 206 149 28 chr5 172345001 172345108 -27285042 + HAL1b LINE L1 1229 1348 0 194 259 49 86 chr5 172345429 172345510 -27284640 - MIR3 SINE MIR -21 187 110 536 274 178 11 chr5 172345520 172345799 -27284351 + Charlie8 DNA MER1_type 3 1428 -989 199 308 88 22 chr5 172345806 172345897 -27284253 - MIR3 SINE MIR -107 101 5 435 223 27 125 chr5 172346537 172346761 -27283389 + MER102b DNA MER1_type 139 340 -1 421 225 103 7 chr5 172347100 172347249 -27282901 + MIR SINE MIR 10 147 -61 540 278 222 0 chr5 172347653 172347815 -27282335 + MIR SINE MIR 11 208 -54 223 352 66 0 chr5 172348630 172348721 -27281429 - MIR3 SINE MIR -107 101 5 253 325 66 47 chr5 172348947 172349239 -27280911 - L2 LINE L2 -219 3053 2694 195 301 81 57 chr5 172349319 172349442 -27280708 - L2 LINE L2 -31 3241 3116 1497 207 62 6 chr5 172349643 172349966 -27280184 + MER58B DNA MER1_type 1 341 0 1340 187 30 33 chr5 172350494 172350794 -27279356 + AluJo SINE Alu 1 299 -13 1691 222 32 28 chr5 172351139 172351608 -27278542 - MER113 DNA MER1_type? -49 472 2 318 353 75 0 chr5 172352854 172352987 -27277163 - MIR SINE MIR -96 166 24 271 261 116 51 chr5 172353487 172353625 -27276525 - MIR SINE MIR -2 260 114 205 297 0 102 chr5 172355300 172355418 -27274732 + MIR3 SINE MIR 55 160 -48 1481 220 92 32 chr5 172355512 172355948 -27274202 + MLT1C LTR MaLR 6 467 0 395 260 0 47 chr5 172355948 172356073 -27274077 - MER117 DNA MER1_type -78 119 1 768 200 0 0 chr5 172356419 172356549 -27273601 + FLAM_A SINE Alu 8 137 -5 806 130 0 15 chr5 172357512 172357643 -27272507 - AluJb SINE Alu -52 260 132 2109 104 0 0 chr5 172357650 172357937 -27272213 - AluSx SINE Alu -25 287 1 237 158 0 0 chr5 172357938 172357976 -27272174 - AluJb SINE Alu -157 142 105 563 103 0 0 chr5 172358112 172358190 -27271960 + AluSg/x SINE Alu 217 294 -15 716 126 0 0 chr5 172358202 172358305 -27271845 - AluJb SINE Alu -208 104 2 225 65 0 0 chr5 172358318 172358349 -27271801 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6254 158 55 5 chr5 172358353 172359186 -27270964 - L1PB1 LINE L1 0 6151 5361 198 0 0 0 chr5 172359186 172359208 -27270942 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 6254 158 55 5 chr5 172359208 172360380 -27269770 - L1PB1 LINE L1 -790 5361 4048 261 299 47 28 chr5 172360713 172360820 -27269330 - MIR SINE MIR -46 216 108 210 279 0 19 chr5 172361826 172361905 -27268245 + MIR SINE MIR 88 146 -62 1468 223 73 40 chr5 172361913 172362389 -27267761 + MLT1D LTR MaLR 7 498 -7 292 132 57 0 chr5 172363209 172363262 -27266888 + L1MB4 LINE L1 6120 6175 -5 214 346 105 0 chr5 172364296 172364429 -27265721 - L3 LINE CR1 -122 1455 1309 625 307 41 5 chr5 172364611 172364829 -27265321 - MIR SINE MIR -14 248 23 1745 174 15 35 chr5 172365289 172365629 -27264521 - MLT1A1 LTR MaLR 0 365 33 728 161 21 88 chr5 172365677 172365869 -27264281 - L1ME2 LINE L1 -25 6139 5961 2161 125 7 7 chr5 172366772 172367076 -27263074 + AluSx SINE Alu 1 304 -8 406 268 63 0 chr5 172367220 172367347 -27262803 + MIR SINE MIR 113 247 -15 253 203 54 14 chr5 172367647 172367721 -27262429 - MIR3 SINE MIR -51 157 81 347 191 24 36 chr5 172368718 172368802 -27261348 - MER117 DNA MER1_type -7 190 108 442 270 59 20 chr5 172369004 172369156 -27260994 + MER117 DNA MER1_type 1 158 -39 523 232 158 5 chr5 172370183 172370373 -27259777 + MIR SINE MIR 38 256 -6 273 128 0 0 chr5 172370437 172370484 -27259666 + (TG)n Simple_repeat Simple_repeat 2 48 0 4801 134 12 31 chr5 172371037 172371835 -27258315 - LTR39 LTR ERV1 0 783 1 238 296 45 11 chr5 172373096 172373184 -27256966 + MIR3 SINE MIR 65 155 -53 423 217 36 65 chr5 172373733 172373871 -27256279 - MIR3 SINE MIR -48 160 27 232 274 0 0 chr5 172374496 172374569 -27255581 - HAL1b LINE L1 -3 1345 1273 1412 240 115 27 chr5 172374816 172375296 -27254854 - L1ME3 LINE L1 -2 6160 5639 752 224 166 7 chr5 172375308 172375606 -27254544 - L1ME3 LINE L1 -580 5582 5237 870 210 108 5 chr5 172376464 172376659 -27253491 - MER20 DNA MER1_type -3 216 2 294 267 89 0 chr5 172376659 172376760 -27253390 - MIR3 SINE MIR -47 161 52 2470 92 0 10 chr5 172377020 172377326 -27252824 - AluSx SINE Alu -9 303 1 2233 132 3 0 chr5 172378157 172378467 -27251683 - AluSx SINE Alu -1 311 1 354 282 58 35 chr5 172379041 172379150 -27251000 - MER5B DNA MER1_type 0 178 62 2277 107 3 0 chr5 172379150 172379449 -27250701 - AluSg SINE Alu -10 300 1 354 282 58 35 chr5 172379449 172379513 -27250637 - MER5B DNA MER1_type -116 62 1 1084 227 128 21 chr5 172379571 172379954 -27250196 + MER113 DNA MER1_type? 38 461 -60 511 262 155 23 chr5 172381419 172381728 -27248422 + L1MC4 LINE L1 7689 8038 -4 189 74 0 0 chr5 172382167 172382194 -27247956 + (CA)n Simple_repeat Simple_repeat 2 28 0 191 330 86 24 chr5 172382295 172382504 -27247646 + L2 LINE L2 2673 2894 -420 15865 70 17 6 chr5 172382991 172385191 -27244959 + L1P LINE L1 2581 4805 -1341 17190 107 15 7 chr5 172385307 172387792 -27242358 - L1P LINE L1 -3502 2644 141 9354 107 20 2 chr5 172387910 172389227 -27240923 - THE1A-int LTR MaLR -240 1340 1 2759 78 0 11 chr5 172389227 172389586 -27240564 - THE1A LTR MaLR 0 355 1 1793 172 27 73 chr5 172389845 172390078 -27240072 - MLT1B LTR MaLR -1 389 182 2022 122 0 37 chr5 172390078 172390374 -27239776 - AluSg1 SINE Alu -24 285 1 1793 172 27 73 chr5 172390374 172390548 -27239602 - MLT1B LTR MaLR -208 182 1 3803 164 73 59 chr5 172390663 172391507 -27238643 + L1M4c LINE L1 16 871 -5513 232 215 185 0 chr5 172391650 172391715 -27238435 - Zaphod DNA AcHobo -243 3788 3712 3038 206 105 64 chr5 172391731 172391907 -27238243 - Zaphod DNA AcHobo -481 3550 3383 883 157 86 25 chr5 172391907 172392105 -27238045 + MER6B DNA MER2_type 1 210 0 3038 206 105 64 chr5 172392105 172393062 -27237088 - Zaphod DNA AcHobo -648 3383 2371 1023 290 39 7 chr5 172393076 172393359 -27236791 - Zaphod DNA AcHobo -3653 378 87 485 247 174 27 chr5 172393696 172393915 -27236235 + MIR SINE MIR 12 262 0 4491 176 61 19 chr5 172394023 172394067 -27236083 - L1MB3 LINE L1 0 6183 6142 2547 60 0 22 chr5 172394067 172394385 -27235765 - AluY SINE Alu 0 311 1 4491 176 61 19 chr5 172394385 172395701 -27234449 - L1MB3 LINE L1 -41 6142 4832 1415 150 77 0 chr5 172395853 172396100 -27234050 - MLT1C LTR MaLR -201 266 1 802 157 0 33 chr5 172396112 172396265 -27233885 + L1MB8 LINE L1 6031 6178 0 6437 109 56 31 chr5 172396575 172396695 -27233455 + L1MA1 LINE L1 4894 5010 -1292 2046 138 3 28 chr5 172396695 172397015 -27233135 + AluSx SINE Alu 1 312 0 6437 109 56 31 chr5 172397015 172397444 -27232706 + L1MA1 LINE L1 5010 5427 -875 1784 139 43 32 chr5 172397444 172397754 -27232396 + AluSx SINE Alu 1 313 0 6437 109 56 31 chr5 172397754 172397942 -27232208 + L1MA1 LINE L1 5427 5609 -693 2051 98 3 95 chr5 172397942 172398279 -27231871 + AluSx SINE Alu 1 306 -6 6437 109 56 31 chr5 172398279 172398910 -27231240 + L1MA1 LINE L1 5609 6302 0 612 284 52 71 chr5 172399088 172399469 -27230681 + L1MC4a LINE L1 5543 5916 -1892 276 241 45 18 chr5 172399574 172399686 -27230464 + L1ME4a LINE L1 5853 5967 -154 254 269 21 21 chr5 172400564 172400657 -27229493 + L2 LINE L2 3170 3262 -10 197 258 43 54 chr5 172400695 172400788 -27229362 - MIR SINE MIR -84 124 33 224 188 53 65 chr5 172400961 172401038 -27229112 + MIR SINE MIR 79 155 -53 267 309 0 21 chr5 172401342 172401436 -27228714 - MLT1K LTR MaLR -495 93 2 296 218 35 11 chr5 172402944 172403031 -27227119 - L1MC5 LINE L1 -41 7920 7832 378 271 225 0 chr5 172403141 172403292 -27226858 - MIR SINE MIR -25 237 53 998 152 30 95 chr5 172403395 172403658 -27226492 - LTR37B LTR ERV1 -25 443 198 1941 125 21 0 chr5 172403857 172404137 -27226013 - AluSx SINE Alu -26 286 1 251 148 56 37 chr5 172404151 172404205 -27225945 - LTR37B LTR ERV1 -397 71 17 521 199 46 30 chr5 172405616 172405747 -27224403 - MER5A DNA MER1_type -36 153 21 311 311 122 14 chr5 172405727 172405949 -27224201 + L3 LINE CR1 1240 1485 -92 * 260 198 147 35 chr5 172405993 172406109 -27224041 - L2 LINE L2 0 3272 3144 216 191 0 0 chr5 172406105 172406147 -27224003 + MIR3 SINE MIR 146 187 -21 * 493 332 37 12 chr5 172406495 172406739 -27223411 - MIR SINE MIR -1 261 12 211 270 32 0 chr5 172406805 172406868 -27223282 - L2 LINE L2 -52 3261 3197 2129 123 40 0 chr5 172407482 172407782 -27222368 - AluSq SINE Alu -1 312 1 33 25 0 0 chr5 172408464 172408504 -27221646 + AT_rich Low_complexity Low_complexity 1 40 0 677 163 158 94 chr5 172409462 172409665 -27220485 + MER20 DNA MER1_type 4 219 0 180 0 0 0 chr5 172410020 172410040 -27220110 + (TG)n Simple_repeat Simple_repeat 1 20 0 2147 118 0 0 chr5 172410040 172410319 -27219831 - AluSx SINE Alu -33 279 1 989 87 48 0 chr5 172410321 172410447 -27219703 - AluSq/x SINE Alu -180 132 1 469 150 12 0 chr5 172410877 172410957 -27219193 + L1M4 LINE L1 3791 3871 -2275 1137 92 0 0 chr5 172411106 172411248 -27218902 + AluSx SINE Alu 1 142 -170 1214 137 0 6 chr5 172411538 172411721 -27218429 + AluSx SINE Alu 121 302 -10 197 290 0 16 chr5 172411969 172412031 -27218119 - L3 LINE CR1 -2 1575 1515 780 252 65 9 chr5 172412467 172412697 -27217453 - MIR SINE MIR -1 261 19 29 0 0 0 chr5 172413177 172413206 -27216944 + AT_rich Low_complexity Low_complexity 1 29 0 194 180 120 0 chr5 172413229 172413279 -27216871 - L3 LINE CR1 -155 1422 1367 407 259 46 63 chr5 172413567 172413741 -27216409 - MIR3 SINE MIR -27 181 11 368 297 119 17 chr5 172413835 172414135 -27216015 + L1MC/D LINE L1 5592 5915 -247 2481 82 0 0 chr5 172414831 172415137 -27215013 + AluSx SINE Alu 1 306 -6 1306 167 0 9 chr5 172416393 172416609 -27213541 - AluJb SINE Alu -14 298 85 294 325 94 16 chr5 172416617 172416808 -27213342 + L1ME LINE L1 5492 5697 -424 2284 110 0 10 chr5 172416811 172417121 -27213029 + AluSx SINE Alu 1 307 -5 473 202 86 6 chr5 172418863 172418996 -27211154 + MIR SINE MIR 84 225 -37 225 171 0 0 chr5 172419026 172419067 -27211083 + (TAG)n Simple_repeat Simple_repeat 1 41 0 204 254 0 32 chr5 172420629 172420692 -27209458 + CT-rich Low_complexity Low_complexity 1 61 0 4310 168 89 15 chr5 172421463 172422817 -27207333 - L1MB3 LINE L1 -1 6182 4731 524 260 0 8 chr5 172425111 172425238 -27204912 + MER5A DNA MER1_type 64 189 0 199 132 309 0 chr5 172426397 172426465 -27203685 + MIR3 SINE MIR 114 202 -6 236 190 304 0 chr5 172426623 172426702 -27203448 - MER103 DNA DNA -1 165 63 635 172 33 0 chr5 172426745 172426867 -27203283 - THE1A LTR MaLR -2 353 228 3504 160 99 5 chr5 172426986 172427736 -27202414 + L1M4c LINE L1 783 1602 -4782 15209 182 51 17 chr5 172427780 172428428 -27201722 + L1MA4A LINE L1 1 626 -6222 1404 229 17 13 chr5 172428428 172428729 -27201421 + AluJo SINE Alu 5 306 -6 15209 182 51 17 chr5 172428729 172431922 -27198228 + L1MA4A LINE L1 626 3973 -2875 18957 158 46 22 chr5 172431955 172432124 -27198026 + L1P4 LINE L1 1 164 -7437 2028 96 92 3 chr5 172432124 172432406 -27197744 + AluY SINE Alu 1 307 -4 18957 158 46 22 chr5 172432406 172434878 -27195272 + L1P4 LINE L1 164 2575 -5026 2890 3 0 0 chr5 172434878 172435182 -27194968 + AluYa5 SINE Alu 1 304 -7 18957 158 46 22 chr5 172435182 172437117 -27193033 + L1P4 LINE L1 2575 4462 -3139 2109 147 0 3 chr5 172437117 172437430 -27192720 + AluSx SINE Alu 1 312 0 18957 158 46 22 chr5 172437430 172439613 -27190537 + L1P4 LINE L1 4462 6926 -675 6478 162 42 8 chr5 172439740 172439918 -27190232 + L1MA4A LINE L1 4697 4868 -2137 2088 123 7 10 chr5 172439918 172440219 -27189931 + AluSx SINE Alu 1 300 -12 6478 162 42 8 chr5 172440219 172441761 -27188389 + L1MA4A LINE L1 4868 6505 -500 276 30 0 0 chr5 172441761 172441794 -27188356 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 6478 162 42 8 chr5 172441794 172442301 -27187849 + L1MA4A LINE L1 6505 6994 -11 322 175 0 0 chr5 172442311 172442368 -27187782 + L1M4c LINE L1 1604 1660 -4724 * 1680 105 4 0 chr5 172442366 172442604 -27187546 - L1PB1 LINE L1 -130 6021 5783 688 153 7 35 chr5 172442609 172442893 -27187257 + (TA)n Simple_repeat Simple_repeat 1 276 0 311 111 0 37 chr5 172442894 172442948 -27187202 - L1PB1 LINE L1 -357 5794 5743 413 103 90 0 chr5 172442948 172443026 -27187124 + L1PB1 LINE L1 6066 6150 -1 10184 109 9 1 chr5 172443054 172444478 -27185672 + L1P LINE L1 11 1446 -4700 5278 110 32 17 chr5 172444481 172445316 -27184834 + SVA Other Other 19 866 -520 6269 23 1 10 chr5 172446098 172446784 -27183366 + SVA Other Other 707 1386 0 955 157 14 60 chr5 172446879 172447096 -27183054 + L1PA16 LINE L1 5955 6161 -5 7319 65 5 2 chr5 172447124 172448077 -27182073 + L1P LINE L1 1400 2355 -3791 1838 33 0 0 chr5 172448077 172448288 -27181862 + L1PA5 LINE L1 5937 6151 -3 734 251 38 0 chr5 172448308 172448491 -27181659 + MER58 DNA MER1_type 1 190 -2230 227 86 0 0 chr5 172448497 172448532 -27181618 + L1M4c LINE L1 1643 1677 -4707 1592 131 40 11 chr5 172449044 172449318 -27180832 + L1M4c LINE L1 1653 1934 -4450 331 121 152 101 chr5 172449318 172449358 -27180792 + Tigger2 DNA MER2_type 1 38 -2680 1976 156 3 10 chr5 172449358 172449666 -27180484 - AluJb SINE Alu -6 306 1 331 121 152 101 chr5 172449666 172449724 -27180426 + Tigger2 DNA MER2_type 38 104 -2614 204 280 0 0 chr5 172449998 172450048 -27180102 + C-rich Low_complexity Low_complexity 2 51 0 216 322 56 0 chr5 172450222 172450312 -27179838 + L2 LINE L2 3174 3268 -4 406 230 178 29 chr5 172450574 172450791 -27179359 + MIR SINE MIR 17 253 -9 185 0 0 39 chr5 172451391 172451417 -27178733 + (TAAAAA)n Simple_repeat Simple_repeat 2 26 0 230 325 0 0 chr5 172451467 172451547 -27178603 + MIR3 SINE MIR 125 204 -4 1144 212 67 39 chr5 172451835 172452288 -27177862 - MLT1D LTR MaLR -7 498 3 337 275 106 56 chr5 172452305 172452589 -27177561 + L1MC4a LINE L1 5607 5904 -1904 2035 143 3 0 chr5 172452774 172453075 -27177075 + AluSx SINE Alu 1 302 -10 545 233 23 0 chr5 172453099 172453232 -27176918 + L1ME3 LINE L1 6026 6161 -1 261 268 54 9 chr5 172454192 172454304 -27175846 + MIR SINE MIR 49 165 -97 2607 149 47 38 chr5 172454362 172454470 -27175680 - L1MB7 LINE L1 -19 6165 6060 2448 74 3 3 chr5 172454470 172454769 -27175381 - AluSg SINE Alu -11 299 1 2607 149 47 38 chr5 172454769 172455190 -27174960 - L1MB7 LINE L1 -124 6060 5631 1041 266 119 23 chr5 172455190 172455619 -27174531 + L2 LINE L2 2833 3302 -11 659 295 5 5 chr5 172455619 172455809 -27174341 - MIR SINE MIR -71 191 2 640 318 21 8 chr5 172456158 172456400 -27173750 - MIR SINE MIR -16 246 2 501 252 15 7 chr5 172456591 172456726 -27173424 + MER103 DNA DNA 30 165 -1 1856 147 0 39 chr5 172456787 172457093 -27173057 + AluJo SINE Alu 1 294 -18 245 223 75 11 chr5 172457255 172457349 -27172801 - MIR SINE MIR -12 250 151 637 308 20 28 chr5 172457359 172457606 -27172544 + MIR SINE MIR 3 247 -15 2280 75 4 0 chr5 172457620 172457924 -27172226 + AluSp SINE Alu 2 306 0 351 278 0 21 chr5 172457954 172458051 -27172099 - MIR SINE MIR -109 153 59 216 0 0 0 chr5 172458631 172458655 -27171495 + (A)n Simple_repeat Simple_repeat 1 24 0 229 333 51 0 chr5 172458671 172458788 -27171362 - MIR3 SINE MIR -48 160 38 306 0 0 0 chr5 172458828 172458862 -27171288 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 405 240 17 84 chr5 172459135 172459314 -27170836 + MIR SINE MIR 52 218 -44 636 267 73 0 chr5 172459573 172459764 -27170386 + MIR SINE MIR 20 224 -38 2269 131 0 0 chr5 172459846 172460151 -27169999 + AluSx SINE Alu 1 305 -7 408 303 59 13 chr5 172460174 172460326 -27169824 + MIR3 SINE MIR 30 188 -20 439 259 77 0 chr5 172460504 172460647 -27169503 + MIR SINE MIR 65 218 -44 310 223 32 32 chr5 172461115 172461209 -27168941 + MIR SINE MIR 108 201 -61 1054 117 0 7 chr5 172461357 172461511 -27168639 - LTR32 LTR ERVL 0 471 319 1909 198 21 0 chr5 172461637 172461971 -27168179 - LTR32 LTR ERVL -116 355 15 196 286 33 0 chr5 172461977 172462068 -27168082 + MIR SINE MIR 38 131 -77 1049 152 37 9 chr5 172462074 172462291 -27167859 - MER33 DNA MER1_type 0 363 141 783 144 98 98 chr5 172462291 172462485 -27167665 + MER20 DNA MER1_type 2 195 -24 480 240 0 0 chr5 172462492 172462588 -27167562 - MER33 DNA MER1_type -228 96 1 650 236 67 11 chr5 172463148 172463326 -27166824 + Zaphod DNA AcHobo 1 188 -3843 785 174 12 12 chr5 172463385 172463546 -27166604 + L1MA9 LINE L1 6152 6312 0 1067 285 32 9 chr5 172463552 172463868 -27166282 + Zaphod DNA AcHobo 197 519 -3512 3038 122 67 33 chr5 172463973 172464042 -27166108 - LTR64 LTR ERVK 0 558 493 2231 92 0 0 chr5 172464042 172464324 -27165826 + AluSx SINE Alu 23 304 -8 3038 122 67 33 chr5 172464324 172464794 -27165356 - LTR64 LTR ERVK -65 493 1 183 283 76 54 chr5 172464861 172464953 -27165197 - MIR SINE MIR -65 143 50 267 310 20 20 chr5 172464986 172465086 -27165064 + MIR SINE MIR 1 100 -162 651 140 44 0 chr5 172465122 172465236 -27164914 + L1MD3 LINE L1 7877 7995 0 374 308 68 15 chr5 172465239 172465372 -27164778 + MIR SINE MIR 121 260 -2 609 281 70 10 chr5 172465506 172465705 -27164445 + MIR SINE MIR 42 252 -10 197 214 0 24 chr5 172465860 172465902 -27164248 + L2 LINE L2 3179 3219 -94 232 248 0 18 chr5 172466096 172466205 -27163945 + GA-rich Low_complexity Low_complexity 2 108 0 614 238 5 88 chr5 172467199 172467392 -27162758 - MIR SINE MIR -16 246 70 416 260 75 14 chr5 172468120 172468266 -27161884 + MIR3 SINE MIR 50 204 -4 773 259 42 13 chr5 172468486 172468722 -27161428 - MER102b DNA MER1_type 0 341 99 850 154 7 7 chr5 172468745 172468888 -27161262 + FLAM_C SINE Alu 1 143 0 375 336 15 30 chr5 172468936 172469070 -27161080 + MIR SINE MIR 9 140 -122 773 298 130 44 chr5 172470261 172470807 -27159343 - L2 LINE L2 0 3272 2690 660 240 20 73 chr5 172470942 172471146 -27159004 + MIR SINE MIR 48 240 -22 653 243 212 36 chr5 172471134 172471356 -27158794 - MIR SINE MIR 0 262 2 * 258 324 48 0 chr5 172472070 172472175 -27157975 + L3 LINE CR1 1146 1255 -322 462 351 57 32 chr5 172472179 172472427 -27157723 + MIR SINE MIR 9 262 0 447 384 90 8 chr5 172472451 172472717 -27157433 + L3 LINE CR1 1271 1558 -19 718 236 231 0 chr5 172472930 172473129 -27157021 + MIR SINE MIR 2 246 -16 499 286 12 25 chr5 172473139 172473300 -27156850 - MIR SINE MIR -22 240 82 837 286 33 9 chr5 172473810 172474053 -27156097 - MIR SINE MIR -15 247 2 189 0 0 0 chr5 172475154 172475175 -27154975 + (TTG)n Simple_repeat Simple_repeat 2 22 0 324 208 254 52 chr5 172476713 172476886 -27153264 - MIR SINE MIR -19 243 36 637 148 0 0 chr5 172476921 172477022 -27153128 - AluJo SINE Alu -11 301 201 674 202 0 8 chr5 172477024 172477143 -27153007 - AluJo SINE Alu -189 123 6 309 246 110 34 chr5 172477148 172477266 -27152884 + L2 LINE L2 3137 3263 -50 254 247 192 34 chr5 172477495 172477641 -27152509 - MIR SINE MIR -87 175 7 516 124 45 34 chr5 172477835 172477905 -27152245 + AluSx SINE Alu 2 75 -238 1485 89 21 0 chr5 172477905 172478096 -27152054 + AluSg/x SINE Alu 111 305 -7 516 124 45 34 chr5 172478096 172478114 -27152036 + AluSx SINE Alu 75 91 -222 189 286 0 82 chr5 172478114 172478196 -27151954 + MIR SINE MIR 163 237 -25 1571 166 99 0 chr5 172478196 172478509 -27151641 + MER2 DNA MER2_type 1 344 0 189 286 0 82 chr5 172478509 172478524 -27151626 + MIR SINE MIR 237 252 -10 440 159 0 230 chr5 172479526 172479765 -27150385 - MER92B LTR ERV1 0 636 453 634 203 118 11 chr5 172479766 172479953 -27150197 - MER67C LTR ERV1 -363 347 141 1096 186 88 96 chr5 172479957 172480354 -27149796 + MER92B LTR ERV1 243 636 0 348 273 72 29 chr5 172483224 172483363 -27146787 - MIR SINE MIR -69 193 49 3671 61 4 0 chr5 172483944 172484449 -27145701 - L1P LINE L1 -743 5403 4897 4604 50 0 7 chr5 172484449 172485008 -27145142 + L1PA7 LINE L1 5594 6149 -5 514 309 82 11 chr5 172485008 172485290 -27144860 + L1MC4a LINE L1 5596 5897 -1911 2298 108 3 0 chr5 172485428 172485723 -27144427 - AluSx SINE Alu -16 296 1 745 244 30 95 chr5 172485896 172486191 -27143959 + L2 LINE L2 3028 3303 -10 393 232 51 40 chr5 172487073 172487250 -27142900 - L1ME3A LINE L1 0 6170 5992 584 323 86 51 chr5 172487274 172487771 -27142379 + L2 LINE L2 2688 3202 -70 347 283 23 11 chr5 172487952 172488089 -27142061 + MIR SINE MIR 44 183 -79 1791 166 48 68 chr5 172488554 172488952 -27141198 + MLT1B LTR MaLR 1 390 0 183 197 14 28 chr5 172488952 172489017 -27141133 + CT-rich Low_complexity Low_complexity 22 85 0 416 286 103 16 chr5 172489627 172489812 -27140338 - L2 LINE L2 -212 3060 2860 2408 72 3 0 chr5 172490540 172490831 -27139319 + AluY SINE Alu 1 292 -19 446 154 11 11 chr5 172491403 172491494 -27138656 + L1 LINE L1 2303 2393 -3753 2343 109 0 3 chr5 172491494 172491797 -27138353 + AluSq SINE Alu 1 302 -11 404 260 116 33 chr5 172491819 172492000 -27138150 + MER117 DNA MER1_type 2 197 0 2380 107 0 3 chr5 172492402 172492712 -27137438 + AluSc SINE Alu 1 309 0 2321 105 0 0 chr5 172493800 172494094 -27136056 + AluSx SINE Alu 1 294 -18 233 283 20 61 chr5 172494374 172494473 -27135677 - MIR SINE MIR -27 235 141 263 330 34 42 chr5 172494541 172494659 -27135491 - MIR SINE MIR -35 227 111 213 364 132 0 chr5 172495243 172495501 -27134649 + L2 LINE L2 2392 2683 -631 208 358 74 55 chr5 172495548 172495819 -27134331 + L2 LINE L2 2807 3082 -190 190 333 0 0 chr5 172495862 172495913 -27134237 + MIR SINE MIR 207 257 -5 831 160 17 0 chr5 172495938 172496113 -27134037 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 249 83 0 0 chr5 172496120 172496156 -27133994 + (TGAA)n Simple_repeat Simple_repeat 4 39 0 2042 117 0 46 chr5 172496785 172497092 -27133058 - AluSg1 SINE Alu -16 293 1 2338 113 0 0 chr5 172497424 172497725 -27132425 - AluSx SINE Alu -11 301 1 978 137 37 19 chr5 172497725 172497886 -27132264 - AluJo/FRAM SINE Alu -3 309 146 281 200 0 0 chr5 172497889 172497939 -27132211 - AluSg/x SINE Alu -117 185 136 627 263 79 4 chr5 172497943 172498183 -27131967 - L1MC4a LINE L1 -1895 5913 5656 185 94 31 0 chr5 172498265 172498297 -27131853 + (TTA)n Simple_repeat Simple_repeat 3 35 0 474 236 81 0 chr5 172498300 172498461 -27131689 - L1MC4a LINE L1 -2328 5480 5307 386 264 101 16 chr5 172499216 172499345 -27130805 - MIR SINE MIR -58 204 65 261 0 0 0 chr5 172499362 172499391 -27130759 + (CA)n Simple_repeat Simple_repeat 2 30 0 366 304 17 17 chr5 172499451 172499566 -27130584 - MIR SINE MIR -28 234 120 374 238 29 29 chr5 172499599 172499704 -27130446 - MIR SINE MIR -81 181 77 365 275 159 24 chr5 172500132 172500339 -27129811 + MIR SINE MIR 20 254 -8 276 212 0 0 chr5 172500437 172500503 -27129647 + (TA)n Simple_repeat Simple_repeat 2 67 0 795 216 87 37 chr5 172500531 172500772 -27129378 - MER46C DNA MER2_type -80 258 6 583 336 43 0 chr5 172500832 172501040 -27129110 + MIR SINE MIR 35 251 -11 2165 134 0 7 chr5 172501564 172501869 -27128281 - AluSx SINE Alu -9 303 1 578 154 0 0 chr5 172502002 172502093 -27128057 - AluSc SINE Alu -86 223 133 261 309 75 0 chr5 172502673 172502767 -27127383 - MIR SINE MIR -79 183 83 423 324 96 54 chr5 172502928 172503336 -27126814 + L2 LINE L2 2842 3266 -6 1898 135 0 29 chr5 172503557 172503838 -27126312 + AluSx SINE Alu 1 273 -39 189 343 9 37 chr5 172504107 172504215 -27125935 - L3 LINE CR1 -297 1280 1176 2722 48 0 3 chr5 172504963 172505296 -27124854 + L1PA5 LINE L1 5823 6154 0 1939 113 0 25 chr5 172506028 172506303 -27123847 - AluSx SINE Alu -6 306 39 2591 57 0 0 chr5 172506719 172507015 -27123135 + AluY SINE Alu 7 302 -9 340 280 187 22 chr5 172508220 172508402 -27121748 - MIR SINE MIR -50 212 1 322 323 89 24 chr5 172509804 172509928 -27120222 + L2 LINE L2 3133 3264 -8 2120 120 37 3 chr5 172510202 172510501 -27119649 + AluSx SINE Alu 1 309 -3 206 163 0 20 chr5 172511432 172511481 -27118669 + A-rich Low_complexity Low_complexity 5 52 0 402 259 112 29 chr5 172511647 172511817 -27118333 + L3 LINE CR1 1219 1402 -175 1314 218 56 37 chr5 172511958 172512069 -27118081 - L1MB8 LINE L1 0 6178 6071 2396 89 10 0 chr5 172512069 172512373 -27117777 + AluSp SINE Alu 1 307 -6 1314 218 56 37 chr5 172512373 172512669 -27117481 - L1MB8 LINE L1 -107 6071 5763 183 361 31 21 chr5 172512791 172512888 -27117262 + L3 LINE CR1 1479 1576 -1 364 242 55 55 chr5 172513189 172513317 -27116833 - MIR SINE MIR -122 140 13 300 301 110 29 chr5 172515487 172515623 -27114527 + L2 LINE L2 3109 3255 -17 256 197 0 132 chr5 172515806 172515882 -27114268 - L2 LINE L2 -6 3266 3201 329 259 18 150 chr5 172516098 172516200 -27113950 + MER117 DNA MER1_type 7 66 -131 2465 82 10 0 chr5 172516200 172516504 -27113646 - AluSq SINE Alu -6 307 1 329 259 18 150 chr5 172516504 172516621 -27113529 + MER117 DNA MER1_type 66 197 0 729 194 63 118 chr5 172517301 172517538 -27112612 - MER58A DNA MER1_type 0 224 1 2329 92 3 0 chr5 172518555 172518849 -27111301 - AluSq SINE Alu -18 295 1 1462 143 162 8 chr5 172519491 172519750 -27110400 - AluJo SINE Alu -3 299 1 367 335 33 28 chr5 172520656 172520835 -27109315 + MIR3 SINE MIR 4 139 -69 233 234 43 0 chr5 172521042 172521089 -27109061 - L2 LINE L2 -86 3186 3138 479 263 0 0 chr5 172521091 172521190 -27108960 - L2 LINE L2 -13 3259 3161 502 291 103 0 chr5 172522276 172522451 -27107699 - MIR SINE MIR -15 247 55 852 92 42 0 chr5 172522458 172522578 -27107572 - L1PA11 LINE L1 0 6174 6050 189 231 26 0 chr5 172522580 172522619 -27107531 - MIR SINE MIR -195 67 28 2361 98 0 0 chr5 172522669 172522966 -27107184 + AluSx SINE Alu 1 297 -15 545 296 82 15 chr5 172523120 172523326 -27106824 - MIR SINE MIR -12 250 31 2542 131 30 30 chr5 172523497 172523926 -27106224 + MSTB1 LTR MaLR 4 432 0 194 268 0 0 chr5 172524892 172524933 -27105217 + MIR SINE MIR 47 87 -175 389 245 66 0 chr5 172525095 172525201 -27104949 - L2 LINE L2 -7 3306 3194 325 291 39 10 chr5 172525233 172525336 -27104814 - MIR SINE MIR -108 154 49 425 243 88 34 chr5 172525567 172525715 -27104435 - MIR3 SINE MIR -30 178 23 329 194 231 30 chr5 172526181 172526315 -27103835 + L1ME4a LINE L1 5783 5943 -178 186 43 0 0 chr5 172526317 172526340 -27103810 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 261 0 0 0 chr5 172526339 172526368 -27103782 + (CA)n Simple_repeat Simple_repeat 2 30 0 28 48 0 0 chr5 172526539 172526581 -27103569 + AT_rich Low_complexity Low_complexity 1 42 0 2271 122 0 0 chr5 172526790 172527086 -27103064 - AluSx SINE Alu -16 296 1 2034 110 59 56 chr5 172527173 172527371 -27102779 - THE1C LTR MaLR 0 375 174 2536 79 0 0 chr5 172527371 172527675 -27102475 - AluY SINE Alu -7 304 1 2034 110 59 56 chr5 172527675 172527850 -27102300 - THE1C LTR MaLR -201 174 1 748 262 6 0 chr5 172529154 172529326 -27100824 - MER63A DNA MER1_type -11 199 27 537 257 158 0 chr5 172529657 172529809 -27100341 - MER5A DNA MER1_type -10 179 4 344 288 201 16 chr5 172529821 172530005 -27100145 - MIR SINE MIR -14 248 31 2913 180 20 11 chr5 172530209 172530760 -27099390 + MER74A LTR ERVL 3 558 0 402 294 25 50 chr5 172531182 172531342 -27098808 - MIR SINE MIR -50 212 57 1769 176 75 59 chr5 172531446 172531550 -27098600 + MLT1C LTR MaLR 5 106 -361 2331 124 0 0 chr5 172531550 172531856 -27098294 + AluSx SINE Alu 1 306 -6 1769 176 75 59 chr5 172531856 172532206 -27097944 + MLT1C LTR MaLR 106 466 -1 316 299 17 81 chr5 172532336 172532510 -27097640 - L2 LINE L2 0 3272 3110 2205 105 3 13 chr5 172533850 172534154 -27095996 + AluSc SINE Alu 1 301 -8 2037 145 0 0 chr5 172534351 172534657 -27095493 + AluSx SINE Alu 1 306 0 916 177 13 13 chr5 172534675 172534833 -27095317 + FRAM SINE Alu 1 156 -20 505 282 165 19 chr5 172534834 172535040 -27095110 - MIR SINE MIR -6 256 21 509 227 27 0 chr5 172535113 172535223 -27094927 + MIR3 SINE MIR 42 154 -54 340 331 73 9 chr5 172535251 172535426 -27094724 - MIR SINE MIR -64 198 16 857 266 36 13 chr5 172586405 172586683 -27043467 - MLT-int LTR MaLR -198 1505 955 1818 189 83 2 chr5 172586869 172587251 -27042899 - MLT1-int LTR MaLR -487 884 379 1588 142 132 10 chr5 172587258 172587569 -27042581 - MER21A LTR ERV1 -6 925 577 1507 136 54 112 chr5 172587576 172587655 -27042495 - MER21A LTR ERV1 -619 312 230 512 190 40 0 chr5 172587655 172587755 -27042395 + U6 snRNA snRNA 3 106 -1 1507 136 54 112 chr5 172587755 172588006 -27042144 - MER21A LTR ERV1 -701 230 1 506 116 0 58 chr5 172588007 172588042 -27042108 - MLT1-int LTR MaLR -1373 362 327 2409 206 89 12 chr5 172588042 172588640 -27041510 + LTR48B LTR ERV1 1 644 0 506 116 0 58 chr5 172588640 172588690 -27041460 - MLT1-int LTR MaLR -1408 327 282 2273 88 10 3 chr5 172589052 172589347 -27040803 - AluSp SINE Alu -16 297 1 1975 152 7 0 chr5 172589408 172589704 -27040446 - AluJb SINE Alu -14 298 1 2108 148 3 0 chr5 172590075 172590386 -27039764 - AluSx SINE Alu 0 312 1 559 165 220 0 chr5 172590815 172590924 -27039226 + FLAM_C SINE Alu 1 133 0 884 169 62 34 chr5 172591374 172591535 -27038615 + MLT1-int LTR MaLR 1180 1335 -400 4266 92 7 39 chr5 172591535 172591630 -27038520 + MER4A LTR ERV1 1 98 -502 2252 107 10 10 chr5 172591630 172591940 -27038210 - AluSx SINE Alu -2 310 1 4266 92 7 39 chr5 172591940 172592464 -27037686 + MER4A LTR ERV1 98 600 0 884 169 62 34 chr5 172592464 172592479 -27037671 + MLT1-int LTR MaLR 1335 1716 -19 329 293 47 27 chr5 172592654 172592804 -27037346 + MIR3 SINE MIR 6 158 -50 * 622 261 34 6 chr5 172592801 172592977 -27037173 + MIR SINE MIR 27 207 -55 243 282 36 55 chr5 172592975 172593085 -27037065 + MIR SINE MIR 154 261 -1 * 339 25 0 0 chr5 172593383 172593423 -27036727 + (A)n Simple_repeat Simple_repeat 1 40 0 465 287 11 33 chr5 172593986 172594167 -27035983 - L2 LINE L2 -644 2670 2494 323 104 0 0 chr5 172596271 172596319 -27033831 - AluSc SINE Alu 0 299 252 2320 89 3 7 chr5 172596609 172596911 -27033239 - AluSx SINE Alu -11 301 1 1624 132 43 4 chr5 172596988 172597269 -27032881 + L1MA4A LINE L1 6011 6302 -1 700 264 52 36 chr5 172597607 172597857 -27032293 - MIR SINE MIR 0 262 9 223 315 37 19 chr5 172597861 172597969 -27032181 + MIR SINE MIR 44 153 -109 3094 210 35 22 chr5 172598072 172598796 -27031354 - L1M4 LINE L1 -5199 1343 611 668 68 47 21 chr5 172598800 172599040 -27031110 + (TA)n Simple_repeat Simple_repeat 1 246 0 21 36 0 0 chr5 172599045 172599073 -27031077 + AT_rich Low_complexity Low_complexity 1 28 0 451 177 51 0 chr5 172599073 172599152 -27030998 - FRAM SINE Alu -30 146 64 1013 117 0 0 chr5 172599257 172599394 -27030756 - AluSq/x SINE Alu -175 137 1 1881 153 0 38 chr5 172599983 172600297 -27029853 + AluJb SINE Alu 1 302 -10 394 214 8 92 chr5 172600329 172600440 -27029710 - L2 LINE L2 -6 3307 3207 1612 104 8 77 chr5 172600440 172600700 -27029450 - AluSq SINE Alu -71 242 1 394 214 8 92 chr5 172600700 172600719 -27029431 - L2 LINE L2 -106 3207 3188 461 305 85 5 chr5 172600956 172601156 -27028994 + MIR SINE MIR 24 239 -23 360 218 0 0 chr5 172601734 172601821 -27028329 + CT-rich Low_complexity Low_complexity 3 89 0 372 43 0 0 chr5 172601826 172601872 -27028278 + (A)n Simple_repeat Simple_repeat 1 46 0 180 188 24 35 chr5 172601896 172601981 -27028169 + GA-rich Low_complexity Low_complexity 2 85 0 1208 168 152 20 chr5 172602133 172602436 -27027714 - MER4B LTR ERV1 -267 343 1 2432 238 112 91 chr5 172602438 172603400 -27026750 + L1M4 LINE L1 2894 3834 -2312 1139 200 19 0 chr5 172603400 172603610 -27026540 + MER58A DNA MER1_type 10 223 -1 2432 238 112 91 chr5 172603610 172604359 -27025791 + L1M4 LINE L1 3834 4798 -1348 241 234 4 18 chr5 172604368 172604439 -27025711 + AluJ/monomer SINE Alu 244 302 0 3461 143 6 43 chr5 172604444 172604512 -27025638 + MER4B LTR ERV1 1 70 -540 1722 194 0 3 chr5 172604512 172604877 -27025273 - AluJb SINE Alu 0 364 1 3461 143 6 43 chr5 172604877 172605435 -27024715 + MER4B LTR ERV1 70 606 -4 312 213 0 0 chr5 172605461 172605522 -27024628 + L1M4 LINE L1 4805 4865 -1281 402 71 18 0 chr5 172605712 172605768 -27024382 - Alu SINE Alu -244 57 1 281 71 71 0 chr5 172605768 172605809 -27024341 - MLT1D LTR MaLR -385 120 77 344 290 148 7 chr5 172605931 172606086 -27024064 + MIR SINE MIR 36 212 -50 1596 153 0 89 chr5 172606144 172606457 -27023693 - AluJb SINE Alu -27 285 1 244 295 48 0 chr5 172606475 172606580 -27023570 - MIR SINE MIR -125 137 28 1881 193 8 6 chr5 172606806 172607168 -27022982 - MLT1A1 LTR MaLR -2 363 1 2119 113 7 0 chr5 172609182 172609495 -27020655 - AluSq SINE Alu 0 315 1 1506 181 0 60 chr5 172609522 172609821 -27020329 - AluJb SINE Alu -31 281 1 742 145 0 62 chr5 172610004 172610149 -27020001 - FLAM_C SINE Alu -6 137 2 2477 67 0 0 chr5 172610175 172610474 -27019676 - AluY SINE Alu -12 299 1 1584 145 0 57 chr5 172611014 172611108 -27019042 + AluJo SINE Alu 1 99 -213 3755 196 51 50 chr5 172611108 172612076 -27018074 + LTR5 LTR ERVK 1 969 0 1584 145 0 57 chr5 172612076 172612263 -27017887 + AluJo SINE Alu 99 266 -46 416 101 58 0 chr5 172612397 172612466 -27017684 - MER41A LTR ERV1 -481 73 1 1522 97 4 61 chr5 172612466 172612713 -27017437 - MER41A-int LTR ERV1 -3 5943 5711 * 10986 140 29 36 chr5 172612712 172615465 -27014685 - PABL_A-int LTR ERV1 -426 4589 137 1862 139 10 7 chr5 172616039 172616340 -27013810 + AluSx SINE Alu 11 312 0 233 257 59 37 chr5 172616363 172616499 -27013651 - L1ME4a LINE L1 -105 6016 5878 2106 116 10 3 chr5 172616626 172616919 -27013231 - AluSx SINE Alu -17 295 1 2058 134 7 0 chr5 172617464 172617762 -27012388 + AluSx SINE Alu 5 304 -8 208 226 67 14 chr5 172618250 172618353 -27011797 - MIR SINE MIR -14 194 88 1185 118 0 0 chr5 172618496 172618649 -27011501 + AluSq SINE Alu 1 153 -160 225 133 0 0 chr5 172618658 172618703 -27011447 + Alu SINE Alu 255 299 0 201 62 62 0 chr5 172618778 172618810 -27011340 - MIR SINE MIR -112 150 117 279 270 11 0 chr5 172618901 172618990 -27011160 - L2 LINE L2 0 3272 3183 1554 112 18 0 chr5 172619051 172619275 -27010875 - AluSq SINE Alu -16 297 70 1952 144 0 0 chr5 172619898 172620176 -27009974 + AluSx SINE Alu 6 283 -29 2605 63 0 0 chr5 172620374 172620677 -27009473 - AluY SINE Alu -8 303 1 2159 126 0 13 chr5 172620769 172621071 -27009079 + AluSx SINE Alu 1 298 -14 251 183 0 108 chr5 172621138 172621231 -27008919 + MER5A DNA MER1_type 103 185 -4 219 321 95 15 chr5 172621347 172621484 -27008666 - MER5A DNA MER1_type -5 184 37 2099 142 0 13 chr5 172621519 172621828 -27008322 - AluSx SINE Alu -7 305 1 2099 94 54 3 chr5 172621845 172622143 -27008007 - AluSp SINE Alu 0 313 1 649 216 26 0 chr5 172622231 172622347 -27007803 - MER20 DNA MER1_type 0 219 101 1963 173 0 3 chr5 172622361 172622674 -27007476 + AluJb SINE Alu 1 312 0 203 283 50 0 chr5 172622873 172622933 -27007217 - MIR SINE MIR -118 144 82 717 91 10 0 chr5 172623158 172623257 -27006893 + AluS SINE Alu 2 101 -212 267 195 0 0 chr5 172623374 172623415 -27006735 - Tigger3(Golem) DNA MER2_type -2987 42 2 391 297 178 5 chr5 172623672 172623857 -27006293 + MIR SINE MIR 38 254 -8 21 71 0 0 chr5 172624116 172624158 -27005992 + AT_rich Low_complexity Low_complexity 1 42 0 2609 231 62 7 chr5 172624304 172624984 -27005166 - L1ME1 LINE L1 -5 6161 5445 272 204 19 0 chr5 172625201 172625255 -27004895 - L2 LINE L2 -2 3270 3216 185 321 0 0 chr5 172625481 172625537 -27004613 - MIR SINE MIR -45 217 162 317 263 0 0 chr5 172625542 172625618 -27004532 - MER116 DNA Mariner 0 80 5 270 205 295 27 chr5 172625623 172625735 -27004415 - MIR SINE MIR 0 262 121 187 182 91 0 chr5 172625873 172625917 -27004233 - MIR SINE MIR -71 137 90 5761 199 45 52 chr5 172626139 172626880 -27003270 - L1MC1 LINE L1 0 6613 5868 2287 120 0 0 chr5 172626880 172627188 -27002962 + AluSx SINE Alu 5 312 0 5761 199 45 52 chr5 172627188 172627613 -27002537 - L1MC1 LINE L1 -745 5868 5441 1483 205 3 35 chr5 172627613 172627930 -27002220 - AluJb SINE Alu -5 307 1 5761 199 45 52 chr5 172627930 172628516 -27001634 - L1MC1 LINE L1 -1172 5441 4852 2014 130 7 33 chr5 172628516 172628817 -27001333 - AluSx SINE Alu -19 293 1 5761 199 45 52 chr5 172628817 172629032 -27001118 - L1MC1 LINE L1 -1761 4852 4662 2265 147 81 2 chr5 172629032 172629426 -27000724 - MSTC LTR MaLR -1 427 3 5761 199 45 52 chr5 172629426 172629552 -27000598 - L1MC1 LINE L1 -1951 4662 4537 2047 141 3 10 chr5 172629586 172629892 -27000258 - AluSx SINE Alu -6 306 3 5945 195 111 53 chr5 172629896 172631115 -26999035 - L1MC1 LINE L1 -3270 3156 2009 2136 78 71 3 chr5 172631115 172631398 -26998752 + AluSc SINE Alu 1 302 -7 5945 195 111 53 chr5 172631398 172631472 -26998678 - L1MC1 LINE L1 -4417 2009 1941 2093 138 0 13 chr5 172631472 172631783 -26998367 - AluSx SINE Alu -5 307 1 5945 195 111 53 chr5 172631783 172632546 -26997604 - L1MC1 LINE L1 -4485 1941 924 1015 116 7 7 chr5 172632559 172632697 -26997453 + AluSq/x SINE Alu 1 138 -175 1466 175 48 0 chr5 172632698 172632967 -26997183 - L1MC1 LINE L1 -6125 301 20 322 259 60 17 chr5 172633137 172633253 -26996897 - MIR SINE MIR -65 197 77 494 158 21 0 chr5 172633494 172633589 -26996561 + MER5A DNA MER1_type 13 109 -80 198 0 0 0 chr5 172633606 172633628 -26996522 + (A)n Simple_repeat Simple_repeat 1 22 0 724 213 149 4 chr5 172634289 172634524 -26995626 - LTR37B LTR ERV1 -3 465 197 713 220 92 0 chr5 172634724 172634897 -26995253 - MER5A DNA MER1_type 0 189 1 317 179 0 0 chr5 172634915 172634971 -26995179 - LTR37B LTR ERV1 -406 62 7 * 398 270 63 31 chr5 172634954 172635113 -26995037 + MER102b DNA MER1_type 73 236 -105 896 243 0 6 chr5 172635276 172635449 -26994701 + MER45A DNA AcHobo 1 172 -6 272 246 16 119 chr5 172635529 172635655 -26994495 - MIR3 SINE MIR -9 199 87 5600 88 14 5 chr5 172636066 172636824 -26993326 + L1PA16 LINE L1 5393 6157 -9 663 306 58 27 chr5 172637126 172637387 -26992763 + MLT1K LTR MaLR 195 463 -125 398 302 34 7 chr5 172637872 172638021 -26992129 + L1ME LINE L1 5565 5717 -404 2605 223 59 55 chr5 172638022 172638071 -26992079 - L1ME3A LINE L1 0 6170 6123 2379 84 0 3 chr5 172638071 172638368 -26991782 + AluSx SINE Alu 1 296 -16 2605 223 59 55 chr5 172638368 172639294 -26990856 - L1ME3A LINE L1 -47 6123 5191 1248 170 142 12 chr5 172639384 172639659 -26990491 + AluSg1 SINE Alu 1 307 0 444 243 56 7 chr5 172639662 172639806 -26990344 - L1ME3A LINE L1 -1062 5084 4934 2483 207 54 39 chr5 172639806 172640283 -26989867 + MER119 DNA MER1_type 1 490 -93 2060 104 14 21 chr5 172640283 172640571 -26989579 - AluSx SINE Alu -1 311 26 2483 207 54 39 chr5 172640571 172640664 -26989486 + MER119 DNA MER1_type 490 580 -3 1578 243 23 76 chr5 172640667 172641125 -26989025 + MLT1E LTR MaLR 1 425 -168 1756 181 7 0 chr5 172641125 172641417 -26988733 - AluJo SINE Alu -18 294 1 1578 243 23 76 chr5 172641417 172641526 -26988624 + MLT1E LTR MaLR 425 538 -55 330 234 0 0 chr5 172642286 172642350 -26987800 + MER112 DNA MER1_type 1 64 -196 2107 85 0 7 chr5 172643457 172643796 -26986354 - AluSq SINE Alu 0 352 16 1130 73 0 0 chr5 172644184 172644320 -26985830 + AluSq/x SINE Alu 1 136 -176 1821 120 7 14 chr5 172644320 172644595 -26985555 + AluSx SINE Alu 1 273 -39 256 296 12 12 chr5 172646316 172646397 -26983753 + MIR3 SINE MIR 81 161 -47 370 238 41 0 chr5 172646653 172646775 -26983375 - MIR SINE MIR 0 262 136 481 282 26 0 chr5 172646788 172646905 -26983245 + L2 LINE L2 3117 3236 -36 1924 133 0 11 chr5 172647328 172647660 -26982490 + AluSx SINE Alu 1 329 0 1923 134 33 0 chr5 172647666 172647941 -26982209 + AluSx SINE Alu 5 288 -24 327 283 28 35 chr5 172648222 172648367 -26981783 + MIR3 SINE MIR 41 184 -24 756 145 0 0 chr5 172648538 172648669 -26981481 + (TGGA)n Simple_repeat Simple_repeat 4 134 0 336 264 186 8 chr5 172649138 172649267 -26980883 + MIR SINE MIR 97 248 -14 351 113 0 0 chr5 172649351 172649404 -26980746 + (TATG)n Simple_repeat Simple_repeat 2 54 0 1996 118 0 21 chr5 172649406 172649695 -26980455 - AluSx SINE Alu -29 283 1 2238 124 0 0 chr5 172650140 172650438 -26979712 + AluSx SINE Alu 1 298 -14 415 256 66 0 chr5 172650438 172650559 -26979591 + MIR SINE MIR 127 255 -7 450 0 0 0 chr5 172650617 172650667 -26979483 + (TG)n Simple_repeat Simple_repeat 2 51 0 1526 165 12 50 chr5 172650691 172651013 -26979137 + AluJo SINE Alu 3 312 0 507 127 0 0 chr5 172651176 172651255 -26978895 + AluS SINE Alu 225 303 -8 333 260 58 10 chr5 172651274 172651378 -26978772 + MIR SINE MIR 39 147 -61 231 213 46 0 chr5 172651425 172651533 -26978617 + (TA)n Simple_repeat Simple_repeat 1 113 0 207 0 0 0 chr5 172651533 172651556 -26978594 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 14370 50 12 8 chr5 172651556 172654172 -26975978 - L1PA4 LINE L1 -11 6144 3523 405 100 86 14 chr5 172654304 172654374 -26975776 - MER41A-int LTR ERV1 -5757 1780 1706 * 2648 171 84 45 chr5 172654365 172654962 -26975188 - MER41A-int LTR ERV1 -5326 620 1 4220 98 0 0 chr5 172655029 172655582 -26974568 - MER41A LTR ERV1 -1 553 1 630 198 90 82 chr5 172655649 172655938 -26974212 + Charlie1 DNA MER1_type 1 286 -2475 2463 74 7 0 chr5 172655938 172656235 -26973915 - AluSx SINE Alu -13 299 1 630 198 90 82 chr5 172656235 172656298 -26973852 + Charlie1 DNA MER1_type 286 2761 0 231 235 0 44 chr5 172656550 172656618 -26973532 + MIR SINE MIR 198 262 0 477 319 110 57 chr5 172656650 172657033 -26973117 - L2 LINE L2 0 3272 2870 313 50 0 0 chr5 172657051 172657091 -26973059 + MADE1 DNA Mariner 41 80 0 667 269 111 33 chr5 172657098 172657432 -26972718 - L2 LINE L2 -461 2853 2494 26 74 0 0 chr5 172659927 172659981 -26970169 + AT_rich Low_complexity Low_complexity 1 54 0 21 0 0 0 chr5 172660065 172660086 -26970064 + AT_rich Low_complexity Low_complexity 1 21 0 519 148 12 0 chr5 172660097 172660178 -26969972 - AluJ/FLAM SINE Alu -223 89 8 2215 111 0 0 chr5 172660322 172660611 -26969539 - AluSx SINE Alu -23 289 1 2329 75 3 20 chr5 172662261 172662555 -26967595 + AluY SINE Alu 1 289 -22 2360 81 3 3 chr5 172662760 172663058 -26967092 + AluSg SINE Alu 1 298 -12 872 147 80 6 chr5 172663812 172663975 -26966175 - AluSx SINE Alu -135 177 3 288 0 0 0 chr5 172663985 172664017 -26966133 + (TTG)n Simple_repeat Simple_repeat 3 34 0 213 94 0 0 chr5 172664427 172664459 -26965691 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2270 119 0 0 chr5 172664780 172665083 -26965067 - AluSx SINE Alu -9 303 1 2202 115 3 0 chr5 172665498 172665784 -26964366 - AluSx SINE Alu -24 288 2 819 180 0 0 chr5 172665877 172666005 -26964145 - FLAM_C SINE Alu -1 132 5 469 235 60 80 chr5 172666034 172666380 -26963770 - LTR35 LTR ERV1 0 671 342 362 186 59 68 chr5 172666560 172666678 -26963472 - LTR35 LTR ERV1 -500 118 2 22 35 0 0 chr5 172667805 172667834 -26962316 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 172667960 172667989 -26962161 + AT_rich Low_complexity Low_complexity 1 29 0 535 291 102 28 chr5 172668051 172668305 -26961845 - L2 LINE L2 -1 3312 3040 402 276 164 0 chr5 172669009 172669125 -26961025 - MER102b DNA MER1_type -26 315 181 2016 120 42 3 chr5 172669130 172669413 -26960737 + AluSx SINE Alu 9 302 -10 356 244 49 63 chr5 172669521 172669703 -26960447 - MER5A DNA MER1_type -7 182 4 2327 89 0 22 chr5 172669959 172670273 -26959877 - AluSp SINE Alu -6 307 1 203 311 156 8 chr5 172671037 172671159 -26958991 - MIR SINE MIR -76 186 47 2341 114 0 0 chr5 172671466 172671773 -26958377 - AluSx SINE Alu -1 311 5 2181 105 0 0 chr5 172672171 172672447 -26957703 + AluSq SINE Alu 1 276 -37 215 178 22 0 chr5 172672532 172672577 -26957573 + (TA)n Simple_repeat Simple_repeat 2 47 0 1797 163 0 17 chr5 172672600 172672900 -26957250 + AluJb SINE Alu 1 295 -17 247 214 29 29 chr5 172673433 172673503 -26956647 - Charlie4 DNA MER1_type -9 1952 1883 528 174 184 0 chr5 172673792 172673901 -26956249 + FLAM_A SINE Alu 12 140 -2 230 234 0 78 chr5 172673966 172674030 -26956120 + L1MEd LINE L1 378 436 -5769 1702 147 90 0 chr5 172674032 172674311 -26955839 - AluSx SINE Alu -8 304 1 1442 93 26 0 chr5 172674492 172674685 -26955465 - AluSq SINE Alu -15 298 101 1412 222 88 58 chr5 172674693 172675041 -26955109 + L1MEd LINE L1 307 643 -5753 1660 141 83 28 chr5 172675041 172675331 -26954819 - AluJo SINE Alu -2 310 5 2323 79 3 16 chr5 172675334 172675639 -26954511 - AluSx SINE Alu -11 301 1 1412 222 88 58 chr5 172675639 172675750 -26954400 + L1MEd LINE L1 644 784 -5612 574 209 27 0 chr5 172675762 172675872 -26954278 + L1M4b LINE L1 8 120 -6739 555 156 22 0 chr5 172675872 172675962 -26954188 + FRAM SINE Alu 1 92 -84 513 258 5 68 chr5 172676069 172676259 -26953891 - L2 LINE L2 -208 3105 2928 417 217 172 38 chr5 172676764 172676921 -26953229 + MIR SINE MIR 47 224 -38 208 320 0 13 chr5 172677452 172677530 -26952620 + MIR3 SINE MIR 109 185 -23 2942 3 0 0 chr5 172677535 172677844 -26952306 - AluYa5 SINE Alu -2 309 1 2379 95 0 3 chr5 172678169 172678475 -26951675 - AluSc SINE Alu -4 305 1 26 30 0 0 chr5 172679790 172679823 -26950327 + AT_rich Low_complexity Low_complexity 1 33 0 459 206 96 15 chr5 172681558 172681694 -26948456 - MER103 DNA DNA -7 159 13 13535 76 2 0 chr5 172681953 172684491 -26945659 - L1PA7 LINE L1 -6 6148 3603 2278 100 0 16 chr5 172685163 172685472 -26944678 - AluSq SINE Alu -9 304 1 180 0 0 0 chr5 172685478 172685498 -26944652 + (TCCCC)n Simple_repeat Simple_repeat 1 20 0 2157 110 6 22 chr5 172685518 172685835 -26944315 - AluSx SINE Alu 0 312 1 379 262 21 21 chr5 172687002 172687143 -26943007 - MIR3 SINE MIR -24 184 44 234 226 0 0 chr5 172687169 172687222 -26942928 + MIR3 SINE MIR 109 161 -47 405 263 134 11 chr5 172687850 172688029 -26942121 - L1ME4a LINE L1 -118 6003 5803 1024 191 73 143 chr5 172688032 172688273 -26941877 - LTR37B LTR ERV1 -11 457 266 2195 116 13 0 chr5 172688273 172688576 -26941574 - AluSx SINE Alu -5 307 1 1024 191 73 143 chr5 172688576 172688825 -26941325 - LTR37B LTR ERV1 -202 266 1 1930 125 57 4 chr5 172688992 172689273 -26940877 - AluSx SINE Alu -16 296 1 295 260 0 70 chr5 172689278 172689378 -26940772 + L2 LINE L2 3180 3272 0 1619 52 0 5 chr5 172689759 172689951 -26940199 + AluY SINE Alu 106 296 -15 246 273 0 52 chr5 172690123 172690200 -26939950 - MIR SINE MIR -73 189 117 1032 279 88 37 chr5 172690221 172690933 -26939217 + L2 LINE L2 2518 3285 -28 1895 153 0 0 chr5 172691732 172692059 -26938091 - AluSx SINE Alu 0 312 5 1682 170 0 62 chr5 172692482 172692806 -26937344 + AluJo SINE Alu 1 304 -8 2050 119 10 3 chr5 172693831 172694124 -26936026 + AluSx SINE Alu 1 295 -17 2426 93 3 0 chr5 172694277 172694589 -26935561 - AluSp SINE Alu 0 313 1 1648 150 62 11 chr5 172695134 172695408 -26934742 + AluJb SINE Alu 2 289 -23 23 0 0 0 chr5 172695493 172695516 -26934634 + AT_rich Low_complexity Low_complexity 1 23 0 439 296 60 86 chr5 172695870 172695977 -26934173 - L1ME4a LINE L1 -303 5818 5710 2424 91 3 0 chr5 172695977 172696275 -26933875 - AluSx SINE Alu -13 299 1 439 296 60 86 chr5 172696275 172696376 -26933774 - L1ME4a LINE L1 -411 5710 5618 2248 76 31 7 chr5 172696376 172696664 -26933486 - AluSg SINE Alu -15 295 1 439 296 60 86 chr5 172696664 172696768 -26933382 - L1ME4a LINE L1 -503 5618 5513 680 301 32 0 chr5 172697132 172697351 -26932799 - MIR SINE MIR -1 261 36 344 152 114 0 chr5 172698578 172698657 -26931493 + AluSc SINE Alu 212 299 0 250 214 7 186 chr5 172698743 172698883 -26931267 + L1ME LINE L1 4892 5006 -1140 1205 167 5 5 chr5 172698955 172699147 -26931003 - AluJo SINE Alu -120 192 1 2529 136 40 56 chr5 172699156 172699489 -26930661 + LTR24B LTR ERV1 47 363 -213 1576 211 27 0 chr5 172699489 172699783 -26930367 + AluJb SINE Alu 1 302 -10 2529 136 40 56 chr5 172699783 172699987 -26930163 + LTR24B LTR ERV1 363 569 -7 1338 214 7 45 chr5 172699989 172700442 -26929708 + L1ME LINE L1 5014 5450 -714 482 100 144 56 chr5 172700456 172700546 -26929604 + L1ME LINE L1 5566 5663 -501 223 209 44 66 chr5 172700580 172700671 -26929479 + MIR3 SINE MIR 72 160 -48 1370 215 117 37 chr5 172700850 172701245 -26928905 + L1ME1 LINE L1 5664 6103 -63 2127 121 10 0 chr5 172701245 172701543 -26928607 + AluSx SINE Alu 1 301 -11 1370 215 117 37 chr5 172701543 172701608 -26928542 + L1ME1 LINE L1 6103 6161 -5 472 242 132 21 chr5 172702901 172703091 -26927059 + L1ME LINE L1 5566 5776 -345 1937 101 10 10 chr5 172703187 172703483 -26926667 - L1MA4 LINE L1 -6 6294 5999 1916 113 17 63 chr5 172703533 172703835 -26926315 - AluSx SINE Alu -24 288 1 182 242 44 66 chr5 172704213 172704304 -26925846 + MIR3 SINE MIR 72 160 -48 489 261 55 24 chr5 172706448 172706613 -26923537 - MIR SINE MIR -62 200 31 213 121 0 0 chr5 172706673 172706706 -26923444 + (TTC)n Simple_repeat Simple_repeat 2 34 0 502 332 50 9 chr5 172707511 172707731 -26922419 + MIR SINE MIR 20 248 -14 401 332 26 5 chr5 172707746 172707939 -26922211 - L2 LINE L2 -4 3309 3113 1992 149 3 3 chr5 172707940 172708242 -26921908 - AluJb SINE Alu -10 302 1 2393 101 0 0 chr5 172708506 172708803 -26921347 - AluSg SINE Alu -13 297 1 208 307 13 13 chr5 172708843 172708918 -26921232 - MER5B DNA MER1_type -30 148 74 191 258 68 5 chr5 172709116 172709230 -26920920 - L2 LINE L2 -99 3214 3109 1554 266 92 6 chr5 172709230 172709697 -26920453 - MLT1J LTR MaLR 0 511 5 191 258 68 5 chr5 172709697 172709737 -26920413 - L2 LINE L2 -204 3109 2979 1234 164 5 5 chr5 172709867 172710075 -26920075 + AluSg/x SINE Alu 96 303 -6 468 285 61 12 chr5 172710650 172710815 -26919335 - MER5A DNA MER1_type -16 173 1 2258 98 3 23 chr5 172710911 172711217 -26918933 + AluSq SINE Alu 1 300 -13 2965 173 55 31 chr5 172711610 172712229 -26917921 - LTR27 LTR ERV1 0 636 3 602 144 8 96 chr5 172712230 172712355 -26917795 - MER81 DNA DNA 0 114 1 366 23 0 0 chr5 172712486 172712529 -26917621 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 1434 113 0 30 chr5 172712529 172712759 -26917391 - AluSc SINE Alu -24 285 63 513 261 39 0 chr5 172762997 172763127 -26867023 + L2 LINE L2 3138 3272 0 738 206 54 36 chr5 172763483 172763706 -26866444 - Charlie1 DNA MER1_type 0 2761 2535 497 217 133 0 chr5 172763714 172763834 -26866316 - Charlie1 DNA MER1_type -2623 138 3 1952 99 8 0 chr5 172763912 172764174 -26865976 + MER41A LTR ERV1 1 264 -290 4807 126 40 27 chr5 172764174 172765129 -26865021 + pTR5 LTR ERV1 743 2025 -413 333 224 31 20 chr5 172765129 172765227 -26864923 + LTR30 LTR ERV1 544 642 -80 2546 77 0 0 chr5 172765227 172765552 -26864598 + pTR5 LTR ERV1 66 390 -2048 1492 67 20 0 chr5 172765552 172765801 -26864349 + MER41A LTR ERV1 297 554 0 4027 138 22 0 chr5 172765953 172766549 -26863601 + MER41A-int LTR ERV1 1 609 -5337 180 0 0 0 chr5 172766550 172766570 -26863580 + (TC)n Simple_repeat Simple_repeat 2 21 0 10264 117 22 59 chr5 172766570 172766972 -26863178 + MER41A-int LTR ERV1 1093 1508 -3507 2340 102 0 0 chr5 172766972 172767266 -26862884 - AluSq SINE Alu -17 296 3 10264 117 22 59 chr5 172767266 172767353 -26862797 + MER41A-int LTR ERV1 1508 1597 -3418 2054 128 3 3 chr5 172767353 172767642 -26862508 + AluSg SINE Alu 3 291 -19 10264 117 22 59 chr5 172767642 172768415 -26861735 + MER41A-int LTR ERV1 1597 2397 -2618 1555 66 31 10 chr5 172768415 172768611 -26861539 - AluSc SINE Alu -16 293 94 10264 117 22 59 chr5 172768611 172769998 -26860152 + MER41A-int LTR ERV1 2397 4514 -501 2035 139 13 0 chr5 172769998 172770300 -26859850 + AluSx SINE Alu 1 306 -6 2023 125 12 37 chr5 172770615 172770936 -26859214 + AluSq SINE Alu 1 313 0 2025 161 0 0 chr5 172771001 172771300 -26858850 + AluSx SINE Alu 1 299 -13 990 200 0 0 chr5 172771300 172771470 -26858680 + AluSg/x SINE Alu 134 303 -9 1619 234 57 30 chr5 172771605 172772363 -26857787 - L1M4 LINE L1 -1348 4798 4062 1053 239 23 0 chr5 172772363 172772581 -26857569 - MER58A DNA MER1_type -1 223 1 1619 234 57 30 chr5 172772581 172773359 -26856791 - L1M4 LINE L1 -2084 4062 3047 2106 129 0 0 chr5 172773391 172773686 -26856464 - AluSg SINE Alu -15 295 1 1921 199 86 29 chr5 172773873 172774315 -26855835 + MLT1C LTR MaLR 1 467 0 463 331 0 0 chr5 172774443 172774564 -26855586 - L2 LINE L2 0 3313 3193 1381 213 116 39 chr5 172774654 172775015 -26855135 + MLT1B LTR MaLR 2 390 0 2010 246 39 8 chr5 172775337 172775821 -26854329 - MLT1D LTR MaLR 0 505 7 2077 108 3 14 chr5 172776110 172776436 -26853714 - AluSx SINE Alu 0 312 1 717 202 12 46 chr5 172776444 172776617 -26853533 - L1MB7 LINE L1 -54 6130 5964 903 145 0 0 chr5 172776617 172776755 -26853395 - AluSg/x SINE Alu -5 307 170 662 278 87 54 chr5 172776782 172777171 -26852979 - L1MB7 LINE L1 -395 5775 5400 1525 184 16 16 chr5 172777171 172777301 -26852849 + AluJb SINE Alu 1 130 -182 246 32 0 0 chr5 172777301 172777332 -26852818 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1525 184 16 16 chr5 172777332 172777510 -26852640 + AluJb SINE Alu 129 309 -3 662 278 87 54 chr5 172777510 172777939 -26852211 - L1MB7 LINE L1 -770 5400 4915 1147 167 71 136 chr5 172777975 172778239 -26851911 + MLT1F LTR MaLR 213 493 -49 1854 133 45 3 chr5 172778239 172778525 -26851625 - AluSq SINE Alu -10 303 6 216 0 0 0 chr5 172778530 172778554 -26851596 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 2063 115 0 14 chr5 172778556 172778842 -26851308 - AluSx SINE Alu -30 282 1 1147 167 71 136 chr5 172778842 172778856 -26851294 + MLT1F LTR MaLR 498 511 -31 2380 112 0 0 chr5 172778856 172779168 -26850982 - AluSx SINE Alu 0 312 1 1147 167 71 136 chr5 172779168 172779232 -26850918 + MLT1F LTR MaLR 511 542 0 353 269 11 21 chr5 172779731 172779824 -26850326 + L2 LINE L2 2977 3068 -204 741 280 68 61 chr5 172779904 172780422 -26849728 + MLT1L LTR MaLR 18 612 -3 210 150 0 0 chr5 172780643 172780683 -26849467 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 583 285 113 0 chr5 172780731 172780952 -26849198 + MIR SINE MIR 17 262 0 324 200 0 0 chr5 172782162 172782237 -26847913 + T-rich Low_complexity Low_complexity 4 78 0 2034 121 3 35 chr5 172782355 172782669 -26847481 - AluSx SINE Alu -5 307 4 788 182 0 78 chr5 172782761 172782915 -26847235 - FLAM_C SINE Alu 0 143 2 414 252 10 10 chr5 172783076 172783179 -26846971 - L2 LINE L2 -2 3311 3209 569 299 189 8 chr5 172783183 172783447 -26846703 - MLT1K LTR MaLR -87 501 190 502 299 116 0 chr5 172783464 172783611 -26846539 + MER91A DNA MER1_type 8 171 -25 388 299 97 39 chr5 172783619 172783773 -26846377 - MLT1K LTR MaLR -424 164 2 398 310 49 30 chr5 172783796 172783976 -26846174 + MIR3 SINE MIR 3 181 -62 438 343 91 24 chr5 172784380 172784634 -26845516 + L2 LINE L2 3000 3270 -2 21 0 0 0 chr5 172785285 172785306 -26844844 + AT_rich Low_complexity Low_complexity 1 21 0 3817 147 8 36 chr5 172785355 172785919 -26844231 - L1MB2 LINE L1 -2 6169 5591 180 0 0 0 chr5 172785919 172785939 -26844211 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2047 122 0 0 chr5 172785939 172786217 -26843933 - AluSg SINE Alu -31 279 2 3817 147 8 36 chr5 172786217 172786229 -26843921 - L1MB2 LINE L1 -579 5592 5581 831 194 0 0 chr5 172786229 172786358 -26843792 - FLAM_C SINE Alu -4 129 1 3817 147 8 36 chr5 172786358 172786424 -26843726 - L1MB2 LINE L1 -590 5581 5543 234 244 0 0 chr5 172786783 172786828 -26843322 + L2 LINE L2 3201 3245 -27 547 180 80 0 chr5 172787217 172787317 -26842833 - AluSc SINE Alu -25 284 177 1046 198 82 41 chr5 172787324 172787592 -26842558 - MLT1C LTR MaLR -188 279 1 281 238 24 0 chr5 172787595 172787679 -26842471 - L1MC4 LINE L1 -29 8013 7928 329 293 40 0 chr5 172788023 172788122 -26842028 + MLT1I LTR MaLR 279 381 -28 353 216 27 0 chr5 172788164 172788238 -26841912 - L1MC4 LINE L1 -370 7672 7597 2021 141 10 0 chr5 172788253 172788557 -26841593 - AluSx SINE Alu -5 307 1 1088 131 0 0 chr5 172788741 172788894 -26841256 - AluSp/q SINE Alu -7 306 154 1226 251 61 0 chr5 172788916 172789227 -26840923 - L1MC4 LINE L1 -1014 7028 6699 1723 162 14 3 chr5 172789228 172789518 -26840632 - AluSx SINE Alu -19 293 1 594 179 94 0 chr5 172789552 172789658 -26840492 + AluJb SINE Alu 2 117 -195 2945 138 35 27 chr5 172789681 172790173 -26839977 - LTR9B LTR ERV1 -84 560 62 2376 73 0 38 chr5 172790173 172790489 -26839661 + AluY SINE Alu 1 304 -7 2945 138 35 27 chr5 172790489 172790511 -26839639 - LTR9B LTR ERV1 -582 62 42 4411 124 6 29 chr5 172790512 172790918 -26839232 - HUERS-P3b LTR ERV1 -1 7417 7030 2264 107 0 3 chr5 172790918 172791216 -26838934 - AluSq SINE Alu -16 297 1 4411 124 6 29 chr5 172791216 172791461 -26838689 - HUERS-P3b LTR ERV1 -388 7030 6781 38778 83 8 13 chr5 172791472 172797644 -26832506 + L1PA6 LINE L1 11 6150 -4 23 33 0 0 chr5 172797661 172797691 -26832459 + AT_rich Low_complexity Low_complexity 1 30 0 12201 80 29 14 chr5 172797692 172798266 -26831884 - HUERS-P3b LTR ERV1 -624 6794 6230 2207 123 0 0 chr5 172798266 172798567 -26831583 - AluSx SINE Alu -11 301 1 12201 80 29 14 chr5 172798567 172799968 -26830182 - HUERS-P3b LTR ERV1 -1188 6230 4713 970 115 0 0 chr5 172799959 172800089 -26830061 - HUERS-P3b LTR ERV1 -3544 3874 3745 * 1120 175 19 14 chr5 172800089 172800300 -26829850 + AluJb SINE Alu 99 310 -2 216 316 92 13 chr5 172800499 172800575 -26829575 + MIR SINE MIR 59 140 -68 1635 169 14 7 chr5 172800798 172801094 -26829056 - AluJo SINE Alu -14 298 1 357 270 107 52 chr5 172801254 172801487 -26828663 + L1ME4a LINE L1 5753 5998 -123 207 0 0 0 chr5 172801626 172801649 -26828501 + (T)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr5 172801723 172801744 -26828406 + AT_rich Low_complexity Low_complexity 1 21 0 260 103 0 0 chr5 172802634 172802673 -26827477 + AluJ/FLAM SINE Alu 49 87 -215 202 143 24 0 chr5 172802674 172802716 -26827434 + T-rich Low_complexity Low_complexity 1 43 0 354 215 0 0 chr5 172802731 172802810 -26827340 + A-rich Low_complexity Low_complexity 1 79 0 1021 147 6 0 chr5 172802813 172802970 -26827180 + AluJb SINE Alu 132 289 -23 483 221 103 7 chr5 172803044 172803180 -26826970 - MIR SINE MIR -1 261 113 885 156 0 15 chr5 172804011 172804146 -26826004 - FLAM_C SINE Alu 0 133 1 1726 180 3 0 chr5 172804209 172804503 -26825647 + AluJo SINE Alu 4 298 -14 2245 124 0 0 chr5 172804621 172804920 -26825230 + AluSx SINE Alu 1 299 -13 432 200 59 157 chr5 172805380 172805455 -26824695 + MER102b DNA MER1_type 67 148 -1280 2298 94 3 3 chr5 172805455 172805753 -26824397 - AluSp SINE Alu -15 298 1 432 200 59 157 chr5 172805753 172805982 -26824168 + MER102b DNA MER1_type 148 341 0 188 371 0 0 chr5 172806597 172806667 -26823483 + MIR SINE MIR 63 132 -76 261 229 54 127 chr5 172806668 172806767 -26823383 + MER102b DNA MER1_type 152 230 -1198 2140 123 0 0 chr5 172806767 172807060 -26823090 - AluSx SINE Alu -14 298 6 261 229 54 127 chr5 172807060 172807165 -26822985 + MER102b DNA MER1_type 230 341 0 605 247 32 0 chr5 172807244 172807398 -26822752 + MIR SINE MIR 104 262 0 827 171 0 0 chr5 172807483 172807612 -26822538 - FLAM_A SINE Alu -4 129 1 200 289 0 0 chr5 172807623 172807668 -26822482 + L2 LINE L2 3215 3259 -13 1943 130 32 3 chr5 172807724 172808009 -26822141 + AluSx SINE Alu 1 293 -19 777 122 0 0 chr5 172809340 172809447 -26820703 - AluSx SINE Alu -12 300 194 1103 108 0 0 chr5 172809448 172809587 -26820563 - AluSx SINE Alu -172 141 3 237 211 0 28 chr5 172809648 172809719 -26820431 - L1MC4 LINE L1 -1339 6703 6635 2276 94 7 7 chr5 172811135 172811434 -26818716 + AluSp SINE Alu 1 299 -14 1949 151 7 0 chr5 172811439 172811730 -26818420 + AluSx SINE Alu 1 293 -19 221 270 198 18 chr5 172812066 172812177 -26817973 + MER5A DNA MER1_type 1 131 -58 1984 87 108 11 chr5 172812177 172812454 -26817696 - AluSg SINE Alu -6 304 1 2464 56 0 7 chr5 172812897 172813200 -26816950 - AluSg1 SINE Alu -8 301 1 202 296 71 10 chr5 172813724 172813822 -26816328 - MIR SINE MIR -34 228 125 23 54 0 0 chr5 172814299 172814336 -26815814 + GC_rich Low_complexity Low_complexity 1 37 0 42 20 0 0 chr5 172814466 172814515 -26815635 + GC_rich Low_complexity Low_complexity 1 49 0 1059 151 5 38 chr5 172816425 172816611 -26813539 + L1PA15 LINE L1 5985 6164 -1 21 0 0 0 chr5 172816642 172816663 -26813487 + AT_rich Low_complexity Low_complexity 1 21 0 1640 143 0 0 chr5 172817143 172817380 -26812770 + AluSx SINE Alu 1 237 -75 315 0 0 0 chr5 172818509 172818544 -26811606 + (TG)n Simple_repeat Simple_repeat 2 36 0 2219 121 80 0 chr5 172818865 172819204 -26810946 + LTR47A LTR ERVL 1 366 -86 249 299 75 9 chr5 172819913 172820020 -26810130 - MIR SINE MIR -73 189 76 300 188 0 0 chr5 172820077 172820141 -26810009 + (CA)n Simple_repeat Simple_repeat 2 65 0 939 143 13 7 chr5 172820622 172820776 -26809374 + AluJb SINE Alu 140 294 -18 2301 97 0 0 chr5 172821309 172821597 -26808553 - AluSx SINE Alu -24 288 1 1087 193 22 49 chr5 172822230 172822453 -26807697 + MER20 DNA MER1_type 1 217 -2 1877 86 116 11 chr5 172822678 172822945 -26807205 - AluSg1 SINE Alu -14 295 1 2230 102 10 3 chr5 172823079 172823384 -26806766 + AluSx SINE Alu 1 307 -5 658 254 123 18 chr5 172823494 172823714 -26806436 - MIR SINE MIR -8 254 12 395 255 41 20 chr5 172823716 172823814 -26806336 + MIR SINE MIR 50 149 -113 522 307 34 22 chr5 172824085 172824264 -26805886 + MER5A DNA MER1_type 2 182 -7 2424 83 3 0 chr5 172824927 172825229 -26804921 + AluY SINE Alu 1 303 -8 195 330 61 52 chr5 172827107 172827222 -26802928 + MIR SINE MIR 16 131 -77 2505 63 3 0 chr5 172827401 172827703 -26802447 + AluY SINE Alu 1 303 -8 1897 121 52 3 chr5 172828631 172828921 -26801229 - AluSq SINE Alu -9 304 1 2074 128 0 0 chr5 172831397 172831695 -26798455 + AluSx SINE Alu 2 299 -13 1288 106 0 11 chr5 172831695 172831875 -26798275 + AluSg/x SINE Alu 133 310 0 355 292 80 25 chr5 172833587 172833761 -26796389 - MIR SINE MIR -43 219 34 2072 98 6 70 chr5 172833891 172834207 -26795943 + AluSg SINE Alu 1 296 -14 240 235 29 15 chr5 172835254 172835322 -26794828 + tRNA-Ile-ATT tRNA tRNA 6 74 -3 363 151 32 111 chr5 172835467 172835593 -26794557 + MER113 DNA MER1_type? 1 116 -405 260 207 49 24 chr5 172835664 172835746 -26794404 + MER113 DNA MER1_type? 133 216 -305 704 214 6 0 chr5 172837105 172837278 -26792872 + (CA)n Simple_repeat Simple_repeat 1 174 0 1096 214 0 0 chr5 172838468 172838646 -26791504 - MER45A DNA AcHobo 0 178 1 2642 39 0 23 chr5 172839101 172839411 -26790739 + AluY SINE Alu 1 303 -8 2289 95 0 7 chr5 172839490 172839785 -26790365 + AluSx SINE Alu 7 299 -13 2191 102 0 3 chr5 172839809 172840094 -26790056 + AluSc SINE Alu 1 284 -25 29 0 0 0 chr5 172840094 172840123 -26790027 + AT_rich Low_complexity Low_complexity 1 29 0 315 269 59 25 chr5 172840471 172840590 -26789560 + MIR SINE MIR 140 262 0 745 239 178 81 chr5 172840835 172841011 -26789139 - MLT1L LTR MaLR -4 611 454 1884 155 0 3 chr5 172841011 172841301 -26788849 - AluJb SINE Alu -23 289 1 745 239 178 81 chr5 172841301 172841669 -26788481 - MLT1L LTR MaLR -161 454 14 401 270 108 0 chr5 172841934 172842045 -26788105 + L2 LINE L2 3191 3313 0 2152 107 31 3 chr5 172843195 172843484 -26786666 - AluSx SINE Alu -15 297 1 1762 176 0 13 chr5 172843514 172843815 -26786335 + AluJo SINE Alu 1 297 -15 662 259 66 45 chr5 172843994 172844199 -26785951 - L2 LINE L2 0 3313 3099 2371 90 7 0 chr5 172844199 172844500 -26785650 + AluSq SINE Alu 1 303 -10 662 259 66 45 chr5 172844500 172844580 -26785570 - L2 LINE L2 -214 3099 3022 1046 118 111 205 chr5 172845433 172845669 -26784481 - MER2 DNA MER2_type 0 344 156 2129 121 0 7 chr5 172845669 172845966 -26784184 + AluSx SINE Alu 1 295 -17 1046 118 111 205 chr5 172845966 172846109 -26784041 - MER2 DNA MER2_type -188 156 1 2207 122 0 0 chr5 172846366 172846660 -26783490 - AluSg SINE Alu -16 294 1 1472 133 0 144 chr5 172846821 172847174 -26782976 - AluJo SINE Alu -10 302 1 227 242 32 0 chr5 172847532 172847594 -26782556 - Charlie7 DNA MER1_type -2 2610 2547 1938 92 0 104 chr5 172847621 172847937 -26782213 + AluSx SINE Alu 9 291 -21 1455 180 4 11 chr5 172847959 172848220 -26781930 + AluJo SINE Alu 1 259 -53 210 105 0 53 chr5 172848221 172848235 -26781915 + (GAAAA)n Simple_repeat Simple_repeat 2 15 -22 2457 75 0 0 chr5 172848235 172848541 -26781609 + AluSg1 SINE Alu 1 306 -3 210 105 0 53 chr5 172848541 172848564 -26781586 + (GAAAA)n Simple_repeat Simple_repeat 15 37 0 1999 137 0 19 chr5 172849214 172849527 -26780623 + AluJb SINE Alu 6 312 0 1050 121 0 0 chr5 172849529 172849670 -26780480 + AluSg/x SINE Alu 133 273 -37 1942 128 72 9 chr5 172849674 172850019 -26780131 + L1MB3 LINE L1 5811 6177 -6 22 56 0 0 chr5 172851294 172851330 -26778820 + AT_rich Low_complexity Low_complexity 1 36 0 286 209 22 99 chr5 172852246 172852337 -26777813 + MIR SINE MIR 103 186 -76 486 250 17 0 chr5 172853398 172853511 -26776639 + Charlie1 DNA MER1_type 2348 2462 -299 437 110 68 0 chr5 172853511 172853584 -26776566 - MADE1 DNA Mariner 0 80 3 896 167 132 23 chr5 172853586 172853843 -26776307 + Charlie1 DNA MER1_type 2461 2745 -16 889 166 0 14 chr5 172853951 172854096 -26776054 + FLAM_C SINE Alu 1 143 0 1467 199 17 3 chr5 172854367 172854658 -26775492 + AluJo SINE Alu 1 295 -17 244 255 35 113 chr5 172855203 172855344 -26774806 - MIR3 SINE MIR -18 190 61 32 0 0 0 chr5 172856690 172856722 -26773428 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr5 172857280 172857306 -26772844 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr5 172857664 172857688 -26772462 + AT_rich Low_complexity Low_complexity 1 24 0 282 200 274 19 chr5 172858895 172859165 -26770985 + L1ME4a LINE L1 5582 5920 -201 2291 113 3 0 chr5 172859198 172859507 -26770643 + AluSx SINE Alu 1 310 -2 2152 117 3 3 chr5 172860431 172860730 -26769420 + AluSx SINE Alu 1 299 -13 2405 88 0 0 chr5 172861565 172861870 -26768280 - AluY SINE Alu -6 305 1 1114 157 0 81 chr5 172862798 172863034 -26767116 + AluJb SINE Alu 87 303 -9 2172 98 13 25 chr5 172863141 172863457 -26766693 - AluSx SINE Alu 0 312 1 2134 103 13 20 chr5 172863663 172863964 -26766186 - AluSc SINE Alu -10 299 1 1844 152 18 0 chr5 172863968 172864251 -26765899 - AluSx SINE Alu -24 288 1 445 347 87 35 chr5 172864644 172864932 -26765218 + L2 LINE L2 2368 2670 -644 2070 132 0 0 chr5 172865037 172865332 -26764818 + AluSx SINE Alu 1 295 -17 393 240 171 23 chr5 172865432 172865561 -26764589 + L2 LINE L2 2929 3076 -196 1902 132 14 10 chr5 172865634 172865922 -26764228 + AluJb SINE Alu 6 294 -18 1687 107 35 104 chr5 172866028 172866345 -26763805 + AluSx SINE Alu 1 295 -17 3012 209 49 18 chr5 172866854 172867465 -26762685 - MER82 DNA MER2_type -1 652 23 1000 170 69 0 chr5 172868168 172868356 -26761794 - MIR SINE MIR -31 231 31 242 288 152 67 chr5 172868418 172868895 -26761255 + L2 LINE L2 2644 3196 -117 1280 164 118 0 chr5 172869110 172869348 -26760802 + AluJo SINE Alu 23 288 -24 234 62 0 0 chr5 172869380 172869412 -26760738 + (CA)n Simple_repeat Simple_repeat 2 33 0 2299 78 0 0 chr5 172869612 172869893 -26760257 - AluSc SINE Alu -8 301 21 2306 110 0 7 chr5 172870086 172870394 -26759756 - AluSx SINE Alu -6 306 1 1887 163 19 7 chr5 172870924 172871231 -26758919 + AluJb SINE Alu 1 311 -1 2055 125 13 13 chr5 172871290 172871602 -26758548 + AluSx SINE Alu 1 312 0 306 0 0 0 chr5 172871692 172871726 -26758424 + (TCTA)n Simple_repeat Simple_repeat 4 37 0 540 194 28 56 chr5 172871758 172871902 -26758248 + L1MC4 LINE L1 6789 6928 -1114 1559 139 125 11 chr5 172871902 172872182 -26757968 + AluSx SINE Alu 1 312 0 608 222 68 18 chr5 172872225 172872546 -26757604 + L1MC4 LINE L1 7535 7914 -128 300 248 51 8 chr5 172872593 172872710 -26757440 + L1MC4 LINE L1 7921 8042 0 2105 112 0 3 chr5 172872723 172873008 -26757142 + AluY SINE Alu 6 289 -22 27 0 0 0 chr5 172874730 172874757 -26755393 + AT_rich Low_complexity Low_complexity 1 27 0 805 244 56 28 chr5 172875799 172876086 -26754064 + L1MC4 LINE L1 7629 7923 -119 1563 168 18 11 chr5 172876198 172876483 -26753667 + AluJo SINE Alu 1 287 -25 180 0 0 0 chr5 172876492 172876512 -26753638 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 210 71 0 0 chr5 172877332 172877360 -26752790 + (TA)n Simple_repeat Simple_repeat 2 29 0 21 36 0 0 chr5 172877734 172877762 -26752388 + AT_rich Low_complexity Low_complexity 1 28 0 2081 137 7 0 chr5 172877830 172878136 -26752014 - AluSq SINE Alu -3 310 3 308 279 233 0 chr5 172879112 172879241 -26750909 + L1ME LINE L1 5320 5478 -2330 257 290 71 6 chr5 172879266 172879435 -26750715 + L1ME LINE L1 5725 5904 -217 1472 164 101 11 chr5 172880149 172880435 -26749715 - MER7A DNA MER2_type -1 345 36 32 0 0 0 chr5 172880939 172880971 -26749179 + AT_rich Low_complexity Low_complexity 1 32 0 2204 130 0 0 chr5 172881677 172881984 -26748166 + AluSx SINE Alu 1 307 -5 2152 91 0 14 chr5 172882682 172882979 -26747171 + AluY SINE Alu 3 295 -16 2458 72 0 3 chr5 172883006 172883312 -26746838 + AluY SINE Alu 1 305 -6 366 226 63 109 chr5 172883582 172883803 -26746347 - MER34 LTR ERV1 0 542 347 342 96 41 0 chr5 172883934 172884007 -26746143 + (TA)n Simple_repeat Simple_repeat 2 77 0 768 131 0 0 chr5 172884042 172884149 -26746001 - FLAM_C SINE Alu -36 107 1 246 252 32 81 chr5 172884366 172884489 -26745661 - MER34B LTR ERV1 -448 117 1 701 256 33 42 chr5 172884548 172884773 -26745377 + MIR SINE MIR 3 226 -36 733 278 132 52 chr5 172884861 172885322 -26744828 - L2 LINE L2 -1 3312 2815 372 262 115 47 chr5 172885329 172885766 -26744384 + LTR33 LTR ERVL 17 521 0 181 288 0 0 chr5 172885864 172885923 -26744227 + L2 LINE L2 1712 1770 -1544 284 309 158 12 chr5 172885971 172886136 -26744014 + L2 LINE L2 1974 2162 -1152 2036 143 7 0 chr5 172886213 172886506 -26743644 - AluSx SINE Alu -15 297 3 229 261 126 36 chr5 172886516 172886627 -26743523 + L2 LINE L2 2696 2816 -498 843 122 79 0 chr5 172886733 172886869 -26743281 - MER44D DNA MER2_type 0 705 559 2420 103 16 43 chr5 172886869 172887175 -26742975 + THE1B LTR MaLR 1 297 -67 1893 157 0 0 chr5 172887175 172887462 -26742688 + AluSx SINE Alu 2 288 -24 2420 103 16 43 chr5 172887462 172887523 -26742627 + THE1B LTR MaLR 297 358 -6 2267 121 3 0 chr5 172887524 172887831 -26742319 + AluSp SINE Alu 1 308 -5 3097 125 14 103 chr5 172887840 172887886 -26742264 - MER44D DNA MER2_type -2020 567 519 1777 164 0 14 chr5 172887886 172888178 -26741972 + AluJb SINE Alu 1 288 -24 3097 125 14 103 chr5 172888178 172888271 -26741879 - MER44D DNA MER2_type -2068 519 419 809 143 8 0 chr5 172888271 172888397 -26741753 + FLAM_C SINE Alu 1 127 -6 3097 125 14 103 chr5 172888397 172888878 -26741272 - MER44D DNA MER2_type -2168 419 1 1197 198 20 4 chr5 172889544 172889796 -26740354 + L1ME2 LINE L1 5604 5859 -305 1931 118 51 7 chr5 172889817 172890113 -26740037 + AluSx SINE Alu 1 309 -3 1301 99 11 0 chr5 172890120 172890302 -26739848 + AluSq SINE Alu 118 301 -12 270 233 105 0 chr5 172890303 172890389 -26739761 + L1ME2 LINE L1 5873 5967 -197 2242 118 0 3 chr5 172890453 172890757 -26739393 + AluSx SINE Alu 1 303 -9 665 242 0 0 chr5 172890762 172890882 -26739268 + FLAM_A SINE Alu 1 120 -13 405 231 0 54 chr5 172891087 172891234 -26738916 - L1MC4a LINE L1 -1933 5875 5737 1704 98 8 0 chr5 172891248 172891484 -26738666 - AluSg/x SINE Alu 0 312 75 2122 114 0 3 chr5 172891652 172891942 -26738208 + AluY SINE Alu 1 289 -22 27 0 0 0 chr5 172893664 172893691 -26736459 + AT_rich Low_complexity Low_complexity 1 27 0 805 244 56 28 chr5 172894733 172895020 -26735130 + L1MC4 LINE L1 7629 7923 -119 1563 168 18 11 chr5 172895132 172895417 -26734733 + AluJo SINE Alu 1 287 -25 180 0 0 0 chr5 172895426 172895446 -26734704 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 210 71 0 0 chr5 172896266 172896294 -26733856 + (TA)n Simple_repeat Simple_repeat 2 29 0 21 36 0 0 chr5 172896668 172896696 -26733454 + AT_rich Low_complexity Low_complexity 1 28 0 2081 137 7 0 chr5 172896764 172897070 -26733080 - AluSq SINE Alu -3 310 3 308 279 233 0 chr5 172898046 172898175 -26731975 + L1ME LINE L1 5320 5478 -2330 257 290 71 6 chr5 172898200 172898369 -26731781 + L1ME LINE L1 5725 5904 -217 1472 164 101 11 chr5 172899083 172899369 -26730781 - MER7A DNA MER2_type -1 345 36 32 0 0 0 chr5 172899873 172899905 -26730245 + AT_rich Low_complexity Low_complexity 1 32 0 2245 112 3 0 chr5 172900611 172900916 -26729234 + AluSq SINE Alu 1 306 -7 1582 108 0 0 chr5 172900937 172901141 -26729009 + AluSq SINE Alu 1 204 -109 2152 122 0 3 chr5 172901284 172901580 -26728570 - AluSx SINE Alu -17 295 1 2325 86 0 7 chr5 172901932 172902233 -26727917 - AluSq SINE Alu -14 299 1 250 247 253 45 chr5 172902293 172902447 -26727703 + L2 LINE L2 3128 3313 0 189 0 0 0 chr5 172903425 172903446 -26726704 + (A)n Simple_repeat Simple_repeat 1 21 0 2440 74 0 13 chr5 172904031 172904342 -26725808 + AluSp SINE Alu 2 308 -5 357 62 0 0 chr5 172906351 172906399 -26723751 + (GA)n Simple_repeat Simple_repeat 1 48 0 24 32 0 0 chr5 172906621 172906652 -26723498 + AT_rich Low_complexity Low_complexity 1 31 0 244 233 0 41 chr5 172907132 172907205 -26722945 + A-rich Low_complexity Low_complexity 5 74 0 208 320 77 13 chr5 172907257 172907335 -26722815 - MIR SINE MIR -68 140 58 186 325 32 41 chr5 172907810 172907933 -26722217 + MIR SINE MIR 70 191 -71 573 209 0 0 chr5 172908485 172908590 -26721560 + U6 snRNA snRNA 1 105 -2 1329 159 88 20 chr5 172908592 172908887 -26721263 + L1MC2 LINE L1 6019 6333 -11 2080 110 40 0 chr5 172910647 172910947 -26719203 + AluSx SINE Alu 1 312 0 23 0 0 0 chr5 172911835 172911858 -26718292 + AT_rich Low_complexity Low_complexity 1 23 0 2045 127 7 7 chr5 172914136 172914435 -26715715 + AluSx SINE Alu 1 299 -13 303 28 0 0 chr5 172914501 172914537 -26715613 + (CA)n Simple_repeat Simple_repeat 1 36 0 939 189 13 0 chr5 172914539 172914698 -26715452 + AluJb SINE Alu 135 295 -17 596 207 25 0 chr5 172914747 172914868 -26715282 + L1MB7 LINE L1 6006 6129 -55 1818 179 29 9 chr5 172915011 172915351 -26714799 - MER7A DNA MER2_type 0 346 2 22 56 0 0 chr5 172916309 172916345 -26713805 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr5 172916435 172916465 -26713685 + AT_rich Low_complexity Low_complexity 1 30 0 264 191 95 0 chr5 172917459 172917543 -26712607 - L1ME LINE L1 -236 5885 5794 471 271 205 14 chr5 172917589 172917799 -26712351 + MIR SINE MIR 13 262 0 1093 177 0 69 chr5 172917821 172918053 -26712097 + AluJo SINE Alu 84 299 -13 1351 186 0 4 chr5 172919553 172919784 -26710366 + AluJb SINE Alu 1 230 -82 23 0 0 0 chr5 172920120 172920143 -26710007 + AT_rich Low_complexity Low_complexity 1 23 0 2267 93 16 49 chr5 172921435 172921602 -26708548 + THE1A LTR MaLR 1 172 -183 828 76 114 0 chr5 172921602 172921734 -26708416 - L1PA5 LINE L1 0 6154 6008 2267 93 16 49 chr5 172921734 172921933 -26708217 + THE1A LTR MaLR 172 355 0 1894 130 76 13 chr5 172923153 172923469 -26706681 + MER1B DNA MER1_type 2 337 0 202 361 103 21 chr5 172924130 172924227 -26705923 - MIR SINE MIR -157 105 1 21 0 0 0 chr5 172925101 172925122 -26705028 + AT_rich Low_complexity Low_complexity 1 21 0 336 321 139 5 chr5 172927290 172927477 -26702673 + MIR SINE MIR 3 214 -48 31 0 0 0 chr5 172927986 172928017 -26702133 + AT_rich Low_complexity Low_complexity 1 31 0 1965 126 0 43 chr5 172928197 172928529 -26701621 + AluSx SINE Alu 1 312 0 321 254 82 30 chr5 172928819 172928922 -26701228 + MER103 DNA DNA 17 130 -36 1658 135 6 74 chr5 172928922 172929233 -26700917 - AluJb SINE Alu -22 290 1 321 254 82 30 chr5 172929233 172929263 -26700887 + MER103 DNA DNA 130 157 -9 1991 152 3 0 chr5 172929341 172929638 -26700512 - AluJb SINE Alu -14 298 1 810 148 0 0 chr5 172929989 172930104 -26700046 + FLAM_C SINE Alu 6 120 -23 459 130 0 0 chr5 172930110 172930187 -26699963 + (TC)n Simple_repeat Simple_repeat 1 77 0 180 0 0 0 chr5 172930187 172930207 -26699943 + (TA)n Simple_repeat Simple_repeat 1 20 0 1137 155 0 80 chr5 172930219 172930458 -26699692 + AluJb SINE Alu 87 306 -6 2172 98 13 25 chr5 172930562 172930878 -26699272 - AluSx SINE Alu 0 312 1 2143 103 13 20 chr5 172931084 172931386 -26698764 - AluSc SINE Alu -9 300 1 1844 152 18 0 chr5 172931390 172931673 -26698477 - AluSx SINE Alu -24 288 1 445 347 87 35 chr5 172932066 172932354 -26697796 + L2 LINE L2 2368 2670 -644 2070 132 0 0 chr5 172932459 172932754 -26697396 + AluSx SINE Alu 1 295 -17 393 240 171 23 chr5 172932854 172932983 -26697167 + L2 LINE L2 2929 3076 -196 1902 132 14 10 chr5 172933056 172933344 -26696806 + AluJb SINE Alu 6 294 -18 1687 107 35 104 chr5 172933450 172933767 -26696383 + AluSx SINE Alu 1 295 -17 3012 209 49 18 chr5 172934276 172934887 -26695263 - MER82 DNA MER2_type -1 652 23 1000 170 69 0 chr5 172935590 172935778 -26694372 - MIR SINE MIR -31 231 31 242 288 152 67 chr5 172935840 172936317 -26693833 + L2 LINE L2 2644 3196 -117 1280 164 118 0 chr5 172936532 172936770 -26693380 + AluJo SINE Alu 23 288 -24 267 31 0 0 chr5 172936802 172936834 -26693316 + (CA)n Simple_repeat Simple_repeat 2 33 0 2273 79 0 0 chr5 172937034 172937312 -26692838 - AluSc SINE Alu -11 298 21 2306 110 0 7 chr5 172937505 172937813 -26692337 - AluSx SINE Alu -6 306 1 1887 163 19 7 chr5 172938343 172938650 -26691500 + AluJb SINE Alu 1 311 -1 2045 131 13 13 chr5 172938709 172939021 -26691129 + AluSx SINE Alu 1 312 0 414 0 0 0 chr5 172939111 172939157 -26690993 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 540 194 28 56 chr5 172939189 172939333 -26690817 + L1MC4 LINE L1 6789 6928 -1114 1534 143 125 11 chr5 172939333 172939612 -26690538 + AluSx SINE Alu 1 311 -1 922 204 144 97 chr5 172939652 172940137 -26690013 + L1MC4 LINE L1 7535 8042 0 828 149 0 52 chr5 172940150 172940284 -26689866 + FLAM_C SINE Alu 6 132 -11 1596 190 3 20 chr5 172940370 172940675 -26689475 + AluJb SINE Alu 1 300 -12 2225 112 3 3 chr5 172940675 172940978 -26689172 + AluSx SINE Alu 1 303 -9 1498 176 13 49 chr5 172941015 172941322 -26688828 - AluJb SINE Alu -16 296 1 748 106 10 0 chr5 172941735 172941839 -26688311 + AluY SINE Alu 172 276 -35 24 0 0 0 chr5 172942549 172942573 -26687577 + AT_rich Low_complexity Low_complexity 1 24 0 2267 102 0 0 chr5 172944461 172944774 -26685376 + AluSx SINE Alu 3 315 0 13433 121 74 35 chr5 172944860 172944946 -26685204 + Tigger1 DNA MER2_type 3 84 -2334 2584 40 0 10 chr5 172944946 172945246 -26684904 - AluY SINE Alu -14 297 1 13433 121 74 35 chr5 172945246 172946617 -26683533 + Tigger1 DNA MER2_type 84 1401 -1017 1920 130 13 27 chr5 172946617 172946917 -26683233 + AluSx SINE Alu 1 296 -16 13433 121 74 35 chr5 172946917 172947206 -26682944 + Tigger1 DNA MER2_type 1401 1677 -741 1784 171 24 0 chr5 172947206 172947498 -26682652 - AluJb SINE Alu -13 299 1 1880 138 28 0 chr5 172947506 172947789 -26682361 - AluSx SINE Alu -21 291 1 13433 121 74 35 chr5 172947789 172947901 -26682249 + Tigger1 DNA MER2_type 1683 1789 -629 2031 122 3 30 chr5 172947901 172948067 -26682083 - AluSx SINE Alu -17 295 139 2117 129 0 0 chr5 172948067 172948354 -26681796 - AluSx SINE Alu -25 287 1 2031 122 3 30 chr5 172948354 172948490 -26681660 - AluSx SINE Alu -173 139 1 13433 121 74 35 chr5 172948490 172948945 -26681205 + Tigger1 DNA MER2_type 1789 2418 0 235 319 55 8 chr5 172948985 172949179 -26680971 + MIR SINE MIR 7 262 0 582 177 69 15 chr5 172949239 172949369 -26680781 - L2 LINE L2 0 3313 3177 405 251 231 26 chr5 172949435 172949630 -26680520 - L2 LINE L2 -421 2893 2659 1827 145 33 16 chr5 172949728 172950032 -26680118 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr5 172950175 172950197 -26679953 + AT_rich Low_complexity Low_complexity 1 22 0 1827 157 17 7 chr5 172950197 172950484 -26679666 - AluJo SINE Alu -22 290 1 180 0 0 0 chr5 172950531 172950551 -26679599 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr5 172950699 172950727 -26679423 + AT_rich Low_complexity Low_complexity 1 28 0 1574 182 36 30 chr5 172950799 172951101 -26679049 + AluJb SINE Alu 1 304 -8 198 282 259 23 chr5 172951940 172952114 -26678036 - MIR SINE MIR 0 262 48 1930 137 30 13 chr5 172952458 172952758 -26677392 + AluSx SINE Alu 1 305 -7 2411 96 0 3 chr5 172952887 172953200 -26676950 + AluSx SINE Alu 1 312 0 468 189 12 14 chr5 172953694 172953948 -26676202 + AluJo SINE Alu 1 304 -8 1944 147 14 0 chr5 172954254 172954547 -26675603 + AluSq SINE Alu 1 297 -16 1855 132 0 0 chr5 172955079 172955344 -26674806 + AluSq SINE Alu 35 299 -14 308 272 54 83 chr5 172955667 172955818 -26674332 - MIR3 SINE MIR -21 187 35 791 169 141 0 chr5 172956493 172956635 -26673515 + FRAM SINE Alu 1 162 -4 501 219 34 68 chr5 172956963 172957109 -26673041 - MIR SINE MIR -43 219 79 712 153 8 8 chr5 172958708 172958826 -26671324 + MER5A DNA MER1_type 72 189 0 281 210 130 20 chr5 172958965 172959065 -26671085 + MIR3 SINE MIR 97 207 -1 224 146 0 0 chr5 172959359 172959400 -26670750 - L2 LINE L2 -5 3308 3268 1834 157 68 47 chr5 172959500 172959882 -26670268 - LTR8A LTR ERV1 0 727 338 915 169 0 121 chr5 172959890 172960121 -26670029 + AluJo SINE Alu 1 203 -109 791 146 0 8 chr5 172960256 172960379 -26669771 - FLAM_A SINE Alu 0 142 21 1935 80 4 0 chr5 172961303 172961541 -26668609 + AluSp SINE Alu 1 239 -74 1297 279 48 45 chr5 172961703 172962166 -26667984 + LTR16B LTR ERVL 1 464 0 2414 93 0 3 chr5 172962262 172962572 -26667578 - AluSx SINE Alu -3 309 1 1127 68 0 0 chr5 172962579 172962712 -26667438 - AluSq/x SINE Alu -179 133 1 237 310 40 50 chr5 172962743 172962843 -26667307 - MLT1K LTR MaLR -290 298 200 2259 121 0 0 chr5 172963148 172963454 -26666696 + AluSx SINE Alu 1 306 -6 2299 58 6 38 chr5 172964152 172964465 -26665685 + AluY SINE Alu 3 305 -6 1568 162 68 4 chr5 172964480 172964758 -26665392 + AluJb SINE Alu 1 296 -16 2456 75 0 3 chr5 172964785 172965091 -26665059 + AluY SINE Alu 1 305 -6 395 226 63 109 chr5 172965361 172965582 -26664568 - MER34 LTR ERV1 0 542 347 279 106 45 0 chr5 172965713 172965779 -26664371 + (TA)n Simple_repeat Simple_repeat 1 69 0 833 124 0 110 chr5 172965779 172965924 -26664226 - FLAM_C SINE Alu -14 129 1 258 252 32 81 chr5 172966141 172966264 -26663886 - MER34B LTR ERV1 -448 117 1 715 277 44 5 chr5 172966342 172966548 -26663602 + MIR SINE MIR 13 226 -36 718 283 136 45 chr5 172966648 172967097 -26663053 - L2 LINE L2 -9 3304 2815 396 287 90 19 chr5 172967104 172967541 -26662609 + LTR33 LTR ERVL 17 521 0 191 288 0 0 chr5 172967639 172967698 -26662452 + L2 LINE L2 1712 1770 -1544 288 309 158 12 chr5 172967746 172967911 -26662239 + L2 LINE L2 1974 2162 -1152 2011 140 10 0 chr5 172967988 172968280 -26661870 - AluSx SINE Alu -15 297 3 261 297 14 0 chr5 172968290 172968364 -26661786 + L2 LINE L2 2696 2770 -544 865 122 79 0 chr5 172968506 172968642 -26661508 - Tigger7 DNA MER2_type 0 2491 2345 2445 106 16 43 chr5 172968642 172968948 -26661202 + THE1B LTR MaLR 1 297 -67 1876 160 0 0 chr5 172968948 172969235 -26660915 + AluSx SINE Alu 2 288 -24 2445 106 16 43 chr5 172969235 172969296 -26660854 + THE1B LTR MaLR 297 358 -6 2268 124 3 0 chr5 172969297 172969604 -26660546 + AluSp SINE Alu 1 308 -5 3189 127 14 103 chr5 172969613 172969659 -26660491 - MER44D DNA MER2_type -2020 567 519 1777 164 0 14 chr5 172969659 172969951 -26660199 + AluJb SINE Alu 1 288 -24 3189 127 14 103 chr5 172969951 172970044 -26660106 - MER44D DNA MER2_type -2068 519 419 871 143 8 0 chr5 172970044 172970170 -26659980 + FLAM_C SINE Alu 1 127 -6 3189 127 14 103 chr5 172970170 172970651 -26659499 - MER44D DNA MER2_type -2168 419 1 1239 198 20 4 chr5 172971317 172971569 -26658581 + L1ME2 LINE L1 5604 5859 -305 1940 118 51 7 chr5 172971590 172971886 -26658264 + AluSx SINE Alu 1 309 -3 1324 98 11 0 chr5 172971893 172972076 -26658074 + AluSq SINE Alu 118 302 -11 286 233 105 0 chr5 172972077 172972163 -26657987 + L1ME2 LINE L1 5873 5967 -197 2260 118 0 3 chr5 172972228 172972532 -26657618 + AluSx SINE Alu 1 303 -9 745 242 0 0 chr5 172972537 172972669 -26657481 + FLAM_A SINE Alu 1 132 -1 286 209 22 99 chr5 172973371 172973462 -26656688 - MIR SINE MIR -76 186 103 22 56 0 0 chr5 172974378 172974414 -26655736 + AT_rich Low_complexity Low_complexity 1 36 0 3252 125 50 26 chr5 172975689 172976022 -26654128 - L1MB3 LINE L1 -6 6177 5823 1801 121 7 46 chr5 172976022 172976184 -26653966 - AluSx SINE Alu -19 293 147 2052 112 0 37 chr5 172976184 172976506 -26653644 - AluY SINE Alu -1 310 1 1801 121 7 46 chr5 172976506 172976648 -26653502 - AluSx SINE Alu -165 147 1 3252 125 50 26 chr5 172976648 172976898 -26653252 - L1MB3 LINE L1 -360 5823 5580 2296 82 3 10 chr5 172976905 172977211 -26652939 - AluSp SINE Alu -9 304 1 2261 84 10 0 chr5 172977823 172978121 -26652029 + AluSg SINE Alu 1 301 -9 1818 160 7 0 chr5 172978204 172978511 -26651639 - AluSq SINE Alu -4 309 1 601 184 83 0 chr5 172978548 172978657 -26651493 - FLAM_C SINE Alu -15 118 1 325 274 86 83 chr5 172978660 172978724 -26651426 - L1MC/D LINE L1 -377 5744 5682 2044 112 0 3 chr5 172978724 172979018 -26651132 + AluSx SINE Alu 1 293 -19 325 274 86 83 chr5 172979018 172979251 -26650899 - L1MC/D LINE L1 -439 5682 5446 228 257 79 30 chr5 172979826 172979927 -26650223 - LTR33 LTR ERVL 0 521 416 342 194 0 0 chr5 172979969 172980031 -26650119 - MLT1G1 LTR MaLR 0 595 534 1398 147 5 5 chr5 172980049 172980273 -26649877 - AluJo SINE Alu -88 224 1 353 351 18 0 chr5 172980287 172980401 -26649749 + L2 LINE L2 3137 3252 -20 522 122 75 19 chr5 172980793 172980900 -26649250 - L1MB7 LINE L1 -19 6165 6053 352 177 16 0 chr5 172980924 172980986 -26649164 - AluJ/FLAM SINE Alu -202 100 38 1883 148 17 126 chr5 172980987 172981259 -26648891 - L1MB7 LINE L1 -155 6029 5729 2413 69 0 0 chr5 172981259 172981562 -26648588 - AluY SINE Alu -8 303 1 1844 138 0 43 chr5 172981570 172981875 -26648275 - AluSx SINE Alu -16 296 5 1883 148 17 126 chr5 172981875 172981914 -26648236 - L1MB7 LINE L1 -462 5722 5680 1237 167 26 90 chr5 172981914 172982225 -26647925 - AluJo SINE Alu -21 291 1 1883 148 17 126 chr5 172982225 172982381 -26647769 - L1MB7 LINE L1 -504 5680 5604 599 178 0 0 chr5 172982381 172982482 -26647668 - FLAM_A SINE Alu -6 136 36 653 182 2 110 chr5 172982482 172982777 -26647373 - L1MB7 LINE L1 -570 5608 5363 1865 125 36 0 chr5 172982778 172983057 -26647093 - AluSp SINE Alu -20 293 5 1900 155 0 0 chr5 172983066 172983357 -26646793 - AluSx SINE Alu -21 291 1 285 29 0 0 chr5 172983370 172983404 -26646746 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 1711 144 0 7 chr5 172983444 172983715 -26646435 - AluSx SINE Alu -13 299 31 27310 120 31 41 chr5 172983715 172990023 -26640127 + Harlequin LTR ERV1 17 5043 -130 788 133 17 127 chr5 172990017 172990364 -26639786 + Harlequin LTR ERV1 833 1141 -5755 * 4565 88 0 0 chr5 172990362 172990951 -26639199 + Harlequin LTR ERV1 7503 8091 -308 182 231 87 77 chr5 172990951 172991055 -26639095 - L3 LINE CR1 -425 1152 1048 5869 117 133 131 chr5 172991058 172992559 -26637591 + pTR5 LTR ERV1 36 581 -133 1081 181 5 0 chr5 172992597 172992802 -26637348 - L1MB7 LINE L1 -1098 5048 4843 308 148 0 123 chr5 172993028 172993065 -26637085 + MIR SINE MIR 124 147 -115 2257 95 3 0 chr5 172993065 172993370 -26636780 + AluSq SINE Alu 1 306 -7 308 148 0 123 chr5 172993370 172993413 -26636737 + MIR SINE MIR 147 194 -68 360 286 29 48 chr5 172993502 172993696 -26636454 + MIR SINE MIR 23 218 -27 2020 110 3 3 chr5 172994639 172994959 -26635191 + AluSp SINE Alu 2 321 0 189 0 0 0 chr5 172994964 172994985 -26635165 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 283 120 107 93 chr5 172995175 172995250 -26634900 + MIR SINE MIR 98 173 -89 2200 111 30 40 chr5 172995281 172995803 -26634347 - MER51A LTR ERV1 -18 616 3 245 171 8 219 chr5 172995805 172995928 -26634222 + MIR SINE MIR 166 262 0 2289 81 3 0 chr5 172996140 172996437 -26633713 + AluSc SINE Alu 1 298 -11 190 56 56 0 chr5 172996645 172996681 -26633469 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2096 110 3 0 chr5 172996694 172996976 -26633174 - AluSx SINE Alu -25 287 5 1065 139 0 0 chr5 172997035 172997200 -26632950 - AluJo/FRAM SINE Alu -2 310 146 377 173 0 6 chr5 172997200 172997267 -26632883 - Alu SINE Alu -248 54 1 1241 168 0 18 chr5 172997988 172998214 -26631936 + AluSx SINE Alu 14 235 -77 676 196 0 29 chr5 172998214 172998396 -26631754 + AluJb SINE Alu 149 326 0 234 340 115 19 chr5 172998546 172998702 -26631448 + MIR SINE MIR 20 190 -72 1021 206 38 52 chr5 172998950 172999294 -26630856 - L1MC5 LINE L1 -37 7924 7586 2280 56 0 17 chr5 172999309 172999624 -26630526 + AluSp SINE Alu 2 311 0 1197 98 12 0 chr5 172999629 172999792 -26630358 + AluSp SINE Alu 134 298 -15 746 231 18 91 chr5 172999794 172999897 -26630253 - L1MC5 LINE L1 -383 7578 7469 1921 141 10 16 chr5 172999897 173000209 -26629941 - AluSx SINE Alu -2 310 1 746 231 18 91 chr5 173000209 173000393 -26629757 - L1MC5 LINE L1 -492 7469 7273 186 43 0 0 chr5 173000393 173000416 -26629734 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1927 123 4 0 chr5 173000417 173000694 -26629456 - AluSg SINE Alu -32 278 1 746 231 18 91 chr5 173000694 173000732 -26629418 - L1MC5 LINE L1 -648 7313 7274 343 138 17 17 chr5 173000732 173000790 -26629360 + MLT1B LTR MaLR 1 58 -332 1380 143 0 13 chr5 173000891 173001115 -26629035 - AluSx SINE Alu -91 221 1 1481 230 91 9 chr5 173001163 173001493 -26628657 - LTR18A LTR ERVL 0 357 1 1872 144 0 13 chr5 173001764 173002062 -26628088 + AluSx SINE Alu 1 294 -18 719 221 90 14 chr5 173002553 173002842 -26627308 - L1MEc LINE L1 -4004 2392 2082 1769 96 0 4 chr5 173002860 173003100 -26627050 + AluSc SINE Alu 1 239 -70 287 367 70 0 chr5 173003267 173003395 -26626755 - L2 LINE L2 -13 3259 3123 1750 165 38 0 chr5 173004062 173004353 -26625797 + AluJb SINE Alu 1 302 -10 1251 244 3 7 chr5 173004355 173004654 -26625496 + AluSx SINE Alu 1 298 -4 673 151 8 8 chr5 173004904 173005023 -26625127 - L1MB3 LINE L1 -60 6123 6005 673 188 16 0 chr5 173005020 173005148 -26625002 + L1MC2 LINE L1 5649 5778 -555 561 157 19 9 chr5 173005240 173005348 -26624802 + L1MC2 LINE L1 5772 5880 -464 418 257 18 0 chr5 173005459 173005568 -26624582 + L1MDa LINE L1 1806 1916 -4624 678 225 14 0 chr5 173005588 173005730 -26624420 + MLT1F1 LTR MaLR 12 155 -412 * 2308 175 48 5 chr5 173005726 173006161 -26623989 + Tigger6a DNA MER2_type 38 491 -592 1245 80 11 32 chr5 173006919 173007107 -26623043 + THE1C-int LTR MaLR 1397 1580 0 756 149 15 15 chr5 173007107 173007241 -26622909 + THE1C LTR MaLR 1 134 -241 1341 147 35 124 chr5 173008156 173008326 -26621824 + LTR8A LTR ERV1 412 537 -190 2161 101 3 0 chr5 173008326 173008634 -26621516 + AluSq SINE Alu 1 309 -4 1341 147 35 124 chr5 173008634 173008810 -26621340 + LTR8A LTR ERV1 537 727 0 320 220 71 85 chr5 173008811 173008952 -26621198 - MLT1J2 LTR MaLR -304 146 8 1666 81 0 9 chr5 173009615 173009838 -26620312 + AluSx SINE Alu 1 221 -91 440 212 53 0 chr5 173009975 173010107 -26620043 + L1MDa LINE L1 2360 2498 -4042 845 130 0 43 chr5 173010110 173010248 -26619902 + FLAM_C SINE Alu 1 132 -11 471 280 11 5 chr5 173010249 173010438 -26619712 + L1MDa LINE L1 2529 2718 -4003 1121 79 0 67 chr5 173010438 173010603 -26619547 + AluSq SINE Alu 2 155 -158 3662 170 15 11 chr5 173010886 173011538 -26618612 + Tigger1 DNA MER2_type 2 656 -1762 504 123 0 0 chr5 173011539 173011612 -26618538 + AluS SINE Alu 2 74 -239 425 244 7 12 chr5 173011780 173011913 -26618237 + L1MC4a LINE L1 6611 6713 -1095 914 114 38 0 chr5 173011913 173012044 -26618106 + AluSq/x SINE Alu 1 136 -176 1968 132 0 3 chr5 173012045 173012334 -26617816 + AluSx SINE Alu 1 288 -24 366 202 22 115 chr5 173012336 173012491 -26617659 + L1MC5 LINE L1 7138 7275 -686 2397 155 10 0 chr5 173012491 173012877 -26617273 - MLT1B LTR MaLR 0 390 1 366 202 22 115 chr5 173012877 173012904 -26617246 + L1MC5 LINE L1 7275 7303 -658 1997 110 11 0 chr5 173012915 173013197 -26616953 + AluSq SINE Alu 1 285 -28 308 186 57 14 chr5 173013221 173013291 -26616859 - L1MCa LINE L1 -4358 2068 1996 * 343 333 0 0 chr5 173013274 173013364 -26616786 - L1MC4 LINE L1 -1339 6703 6614 1792 101 0 0 chr5 173013702 173013949 -26616201 - AluSg SINE Alu -11 299 53 1095 46 0 0 chr5 173014050 173014181 -26615969 + L1PA8 LINE L1 6040 6170 -2 328 297 10 50 chr5 173014202 173014303 -26615847 + L1ME LINE L1 5682 5778 -343 2044 128 0 0 chr5 173014433 173014737 -26615413 + AluSg SINE Alu 1 304 -6 1686 176 3 3 chr5 173014806 173015101 -26615049 + AluJo SINE Alu 1 295 -17 766 157 0 9 chr5 173015131 173015246 -26614904 - FLAM_C SINE Alu -25 118 5 23 33 0 0 chr5 173015256 173015286 -26614864 + AT_rich Low_complexity Low_complexity 1 30 0 742 209 15 122 chr5 173015375 173015515 -26614635 + MIR SINE MIR 28 181 -81 2066 103 13 0 chr5 173015515 173015815 -26614335 + AluSp SINE Alu 1 304 -9 742 209 15 122 chr5 173015815 173015871 -26614279 + MIR SINE MIR 181 192 -70 1886 133 17 3 chr5 173015871 173016164 -26613986 + AluSx SINE Alu 1 297 -15 742 209 15 122 chr5 173016164 173016229 -26613921 + MIR SINE MIR 192 262 0 878 170 7 0 chr5 173016369 173016522 -26613628 + AluJb SINE Alu 154 307 -5 464 367 18 0 chr5 173017724 173017893 -26612257 - MIR3 SINE MIR -7 201 30 615 144 6 156 chr5 173018051 173018211 -26611939 - AluJo SINE Alu -176 136 1 677 324 54 41 chr5 173018224 173018613 -26611537 - L2 LINE L2 0 3313 2920 1896 115 4 4 chr5 173019273 173019551 -26610599 - AluSx SINE Alu -34 278 1 217 146 0 36 chr5 173019946 173020001 -26610149 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 1697 157 46 0 chr5 173020499 173020780 -26609370 - AluJb SINE Alu -18 294 1 231 281 101 11 chr5 173020817 173020906 -26609244 + MLT1F LTR MaLR 1 97 -445 2085 98 0 3 chr5 173021057 173021343 -26608807 - AluSq SINE Alu -28 285 1 2142 107 0 0 chr5 173021522 173021831 -26608319 - AluSq SINE Alu -4 309 1 1821 147 37 7 chr5 173022141 173022440 -26607710 + AluSx SINE Alu 1 308 -4 1934 124 24 7 chr5 173022442 173022732 -26607418 + AluSg SINE Alu 16 310 0 2073 111 0 0 chr5 173022738 173023057 -26607093 + AluSx SINE Alu 1 312 0 290 301 24 16 chr5 173023333 173023456 -26606694 - L1MC4 LINE L1 -1018 7024 6901 1603 169 4 0 chr5 173023456 173023728 -26606422 + AluJo SINE Alu 1 273 -39 205 313 25 0 chr5 173024140 173024220 -26605930 + (TA)n Simple_repeat Simple_repeat 2 83 0 2061 129 3 0 chr5 173024221 173024516 -26605634 - AluSq SINE Alu -17 296 1 965 271 141 50 chr5 173024532 173024806 -26605344 - L1MC4 LINE L1 -1888 5920 5672 1363 119 109 144 chr5 173024806 173025118 -26605032 - AluSx SINE Alu 0 302 2 965 271 141 50 chr5 173025118 173025440 -26604710 - L1MC4 LINE L1 -2136 5672 5270 1071 146 0 0 chr5 173025842 173026000 -26604150 - AluSg/x SINE Alu -15 297 140 2261 94 28 3 chr5 173026100 173026198 -26603952 - L1PA10 LINE L1 -138 6030 5933 666 226 41 38 chr5 173026198 173026419 -26603731 - L1MB5 LINE L1 -249 5925 5706 1815 157 20 10 chr5 173026419 173026713 -26603437 + AluSx SINE Alu 1 297 -15 666 226 41 38 chr5 173026713 173026818 -26603332 - L1MB5 LINE L1 -468 5706 5293 255 0 0 0 chr5 173026820 173026849 -26603301 - U7 snRNA snRNA -33 30 2 762 180 11 11 chr5 173026850 173027028 -26603122 - L1MB5 LINE L1 -840 5306 5129 2149 97 10 0 chr5 173027035 173027325 -26602825 - AluY SINE Alu -18 293 1 24 0 0 0 chr5 173027344 173027368 -26602782 + AT_rich Low_complexity Low_complexity 1 24 0 2004 139 3 10 chr5 173027421 173027715 -26602435 + AluSx SINE Alu 1 292 -20 1794 188 0 13 chr5 173027718 173028022 -26602128 + AluJo SINE Alu 1 300 -12 2497 190 12 88 chr5 173028039 173028087 -26602063 - MLT2B3 LTR ERVL 0 554 504 450 0 0 0 chr5 173028087 173028137 -26602013 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 2497 190 12 88 chr5 173028137 173028486 -26601664 - MLT2B3 LTR ERVL -50 504 216 2546 74 3 0 chr5 173028486 173028798 -26601352 - AluSp SINE Alu 0 313 1 2497 190 12 88 chr5 173028798 173028999 -26601151 - MLT2B3 LTR ERVL -338 216 1 2233 107 0 13 chr5 173029009 173029318 -26600832 - AluSg SINE Alu -5 305 1 2060 128 3 13 chr5 173029319 173029617 -26600533 - AluSx SINE Alu -17 295 1 313 103 138 92 chr5 173029617 173029694 -26600456 - L1MB5 LINE L1 -1093 5053 4967 475 300 72 0 chr5 173029804 173029984 -26600166 - MIR SINE MIR -32 230 38 1194 75 0 7 chr5 173029986 173030132 -26600018 + AluSq/x SINE Alu 7 151 -162 1177 136 6 0 chr5 173030160 173030329 -26599821 + AluSp SINE Alu 126 295 -18 226 359 24 29 chr5 173030497 173030703 -26599447 + L2 LINE L2 2890 3094 -178 195 337 81 47 chr5 173031086 173031258 -26598892 + MIR SINE MIR 20 197 -65 24 0 0 0 chr5 173031288 173031312 -26598838 + AT_rich Low_complexity Low_complexity 1 24 0 872 139 0 0 chr5 173031480 173031609 -26598541 - FLAM_C SINE Alu -4 129 1 274 265 0 0 chr5 173031626 173031694 -26598456 + L2 LINE L2 3204 3271 -1 956 144 16 37 chr5 173031804 173031991 -26598159 + MER5A DNA MER1_type 1 183 -6 2022 88 11 0 chr5 173032227 173032489 -26597661 - AluY SINE Alu -14 297 33 1141 109 56 204 chr5 173032591 173032800 -26597350 - MLT1B LTR MaLR -83 307 171 2271 102 24 0 chr5 173032800 173033094 -26597056 + AluSx SINE Alu 1 301 -11 1141 109 56 204 chr5 173033094 173033242 -26596908 - MLT1B LTR MaLR -219 171 3 1913 179 31 52 chr5 173033752 173034228 -26595922 + MER31B LTR ERV1 1 466 0 208 179 54 18 chr5 173034450 173034506 -26595644 + CT-rich Low_complexity Low_complexity 4 61 0 1902 214 39 19 chr5 173034551 173034967 -26595183 + L1MC4a LINE L1 6441 6864 -944 419 311 54 4 chr5 173034966 173035207 -26594943 + L1M4 LINE L1 4004 4256 -1890 * 366 183 0 0 chr5 173036578 173036649 -26593501 + (TATG)n Simple_repeat Simple_repeat 1 71 0 326 241 72 0 chr5 173036649 173036732 -26593418 + L1MC4 LINE L1 6615 6703 -1339 323 311 0 0 chr5 173036666 173036756 -26593394 - L1MC4 LINE L1 -1339 6703 6614 * 2442 76 3 0 chr5 173036769 173037060 -26593090 - AluSp SINE Alu -19 294 3 2035 121 18 0 chr5 173037071 173037353 -26592797 - AluSq SINE Alu -26 287 1 573 216 73 48 chr5 173037441 173037670 -26592480 - LTR45B LTR ERV1 0 518 302 1120 160 0 16 chr5 173038237 173038425 -26591725 + AluJb SINE Alu 127 311 -1 983 207 74 86 chr5 173038427 173038751 -26591399 - MSTD LTR MaLR -76 320 1 1798 140 0 8 chr5 173038777 173039042 -26591108 + AluSx SINE Alu 5 267 -45 1163 140 6 0 chr5 173039415 173039594 -26590556 - AluSx SINE Alu -12 298 119 1081 96 0 0 chr5 173040046 173040181 -26589969 - AluSx SINE Alu -177 135 1 2354 97 0 3 chr5 173040190 173040499 -26589651 - AluSg SINE Alu -1 309 2 1570 166 24 48 chr5 173040767 173041062 -26589088 - AluJo SINE Alu -24 288 1 243 316 43 36 chr5 173041477 173041616 -26588534 + MIR3 SINE MIR 20 159 -49 387 319 38 12 chr5 173041618 173041778 -26588372 + MER117 DNA MER1_type 1 164 -33 342 227 82 91 chr5 173042201 173042310 -26587840 + L1ME LINE L1 5191 5300 -920 2287 94 3 0 chr5 173042310 173042624 -26587526 + AluSp SINE Alu 1 315 0 342 227 82 91 chr5 173042624 173042783 -26587367 + L1ME LINE L1 5300 5463 -757 256 299 54 34 chr5 173042873 173042953 -26587197 + L1ME LINE L1 5542 5628 -493 3018 184 35 70 chr5 173042953 173043669 -26586481 - LTR8 LTR ERV1 0 691 1 256 299 54 34 chr5 173043669 173043735 -26586415 + L1ME LINE L1 5628 5691 -430 1553 136 115 57 chr5 173044578 173044857 -26585293 + AluSx SINE Alu 1 295 -17 2451 71 7 0 chr5 173044873 173045167 -26584983 - AluY SINE Alu -15 296 1 254 307 66 66 chr5 173045232 173045369 -26584781 + L2 LINE L2 2767 2903 -411 189 197 26 105 chr5 173045591 173045667 -26584483 + L2 LINE L2 3182 3251 -62 301 279 199 37 chr5 173046442 173046603 -26583547 + L2 LINE L2 3082 3268 -4 868 243 120 84 chr5 173046735 173047128 -26583022 - MLT1G LTR MaLR -1 589 211 2175 124 0 3 chr5 173047128 173047427 -26582723 - AluSx SINE Alu -14 298 1 1878 164 38 0 chr5 173047428 173047720 -26582430 - AluJb SINE Alu -9 303 1 868 243 120 84 chr5 173047720 173047884 -26582266 - MLT1G LTR MaLR -378 212 10 593 38 13 13 chr5 173048004 173048083 -26582067 + MADE1 DNA Mariner 1 79 -1 612 219 12 61 chr5 173048366 173048530 -26581620 + MLT2E LTR ERVL 469 624 -4 2334 100 3 0 chr5 173048543 173048854 -26581296 + AluSx SINE Alu 1 312 0 1849 152 27 28 chr5 173048998 173049035 -26581115 - MER4D LTR ERV1 -539 313 277 2129 95 11 7 chr5 173049035 173049319 -26580831 + AluSx SINE Alu 1 285 -27 180 0 0 0 chr5 173049319 173049339 -26580811 + (TA)n Simple_repeat Simple_repeat 2 21 0 1849 152 27 28 chr5 173049339 173049651 -26580499 - MER4D LTR ERV1 -573 279 1 481 245 0 0 chr5 173049651 173049746 -26580404 - MER58A DNA MER1_type -8 99 5 4035 115 48 7 chr5 173050232 173050850 -26579300 + LTR9B LTR ERV1 1 644 0 6297 55 8 14 chr5 173051324 173052109 -26578041 + LTR17 LTR ERV1 1 780 0 2144 131 3 0 chr5 173052271 173052568 -26577582 + AluSx SINE Alu 9 306 -6 1395 107 0 0 chr5 173052852 173053064 -26577086 - AluSg SINE Alu 0 318 107 2059 99 35 8 chr5 173053064 173053453 -26576697 + LTR7 LTR ERV1 1 450 0 757 99 0 18 chr5 173053453 173053564 -26576586 - AluSg SINE Alu -199 111 3 1815 183 7 0 chr5 173053661 173053961 -26576189 + AluJb SINE Alu 9 310 -2 265 316 8 17 chr5 173054190 173054307 -26575843 + MIR SINE MIR 59 174 -88 2329 90 3 0 chr5 173054378 173054666 -26575484 - AluSg SINE Alu -21 289 1 609 267 31 10 chr5 173054672 173054790 -26575360 + MIR SINE MIR 61 186 -76 2243 119 0 16 chr5 173054790 173055100 -26575050 - AluSx SINE Alu -7 305 1 609 267 31 10 chr5 173055100 173055176 -26574974 + MIR SINE MIR 186 259 -3 2452 42 3 0 chr5 173055418 173055740 -26574410 + AluY SINE Alu 1 311 0 1044 278 148 13 chr5 173055747 173056201 -26573949 - MLT1G1 LTR MaLR 0 595 81 1262 169 156 43 chr5 173056245 173056571 -26573579 - MLT1F LTR MaLR 0 542 180 272 220 27 107 chr5 173056606 173056756 -26573394 - MLT1F LTR MaLR -341 201 64 1294 128 0 5 chr5 173056874 173057062 -26573088 + AluSg/x SINE Alu 121 307 -3 2333 105 0 3 chr5 173057264 173057568 -26572582 - AluSp SINE Alu -10 303 1 230 301 12 12 chr5 173057688 173057771 -26572379 - L2 LINE L2 -204 3068 2986 954 202 0 0 chr5 173058949 173059117 -26571033 + FRAM SINE Alu 1 168 -8 365 175 0 12 chr5 173059123 173059203 -26570947 + GA-rich Low_complexity Low_complexity 3 81 0 248 310 163 16 chr5 173059474 173059658 -26570492 - MIR SINE MIR -49 213 3 3963 130 21 85 chr5 173059660 173059755 -26570395 + MER39 LTR ERV1 1 100 -607 1440 97 0 0 chr5 173059755 173059940 -26570210 - U2 snRNA snRNA -3 185 1 3963 130 21 85 chr5 173059940 173060418 -26569732 + MER39 LTR ERV1 100 517 -190 2413 97 3 0 chr5 173060418 173060726 -26569424 + AluSq SINE Alu 2 310 -3 3963 130 21 85 chr5 173060726 173060905 -26569245 + MER39 LTR ERV1 517 706 -1 243 0 0 0 chr5 173061504 173061531 -26568619 + (TC)n Simple_repeat Simple_repeat 2 28 0 222 171 0 0 chr5 173061531 173061572 -26568578 + (TATG)n Simple_repeat Simple_repeat 3 43 0 2388 79 3 0 chr5 173061572 173061864 -26568286 - AluY SINE Alu -17 294 2 942 173 12 23 chr5 173061867 173062040 -26568110 - FRAM SINE Alu -5 171 1 194 62 31 0 chr5 173062362 173062394 -26567756 + (TTA)n Simple_repeat Simple_repeat 1 33 0 715 188 8 0 chr5 173062394 173062511 -26567639 - FLAM_C SINE Alu -24 119 2 1901 151 0 17 chr5 173062774 173063072 -26567078 + AluSx SINE Alu 11 303 -9 305 223 171 99 chr5 173063162 173063277 -26566873 + MLT1H LTR MaLR 321 426 -123 2192 117 7 0 chr5 173063277 173063568 -26566582 + AluSq SINE Alu 1 293 -20 305 223 171 99 chr5 173063568 173063663 -26566487 + MLT1H LTR MaLR 426 546 -3 572 259 127 0 chr5 173063712 173063909 -26566241 + MER58A DNA MER1_type 2 223 -1 240 35 0 0 chr5 173063946 173063975 -26566175 + (T)n Simple_repeat Simple_repeat 1 29 0 482 178 0 0 chr5 173063985 173064058 -26566092 - AluJ/FLAM SINE Alu -238 74 2 514 250 39 39 chr5 173064065 173064098 -26566052 - L1 LINE L1 -1089 5057 5025 2430 54 0 0 chr5 173064098 173064375 -26565775 + AluY SINE Alu 24 300 -11 514 250 39 39 chr5 173064375 173064597 -26565553 - L1 LINE L1 -1120 5026 4802 672 238 109 36 chr5 173064764 173065176 -26564974 - L1 LINE L1 -1380 4766 4325 293 197 49 0 chr5 173065200 173065261 -26564889 - L1MC4 LINE L1 -1166 6876 6813 * 2780 135 18 7 chr5 173065259 173065702 -26564448 + L1MA4 LINE L1 5575 6022 -278 1847 136 0 0 chr5 173065871 173066136 -26564014 - AluSq SINE Alu -14 299 35 483 167 24 0 chr5 173066296 173066380 -26563770 + Alu SINE Alu 212 297 -13 261 170 38 0 chr5 173066676 173066729 -26563421 - MER117 DNA MER1_type -36 161 107 1905 137 14 14 chr5 173066986 173067279 -26562871 - AluSx SINE Alu -19 293 1 239 314 44 66 chr5 173067809 173067946 -26562204 - MIR3 SINE MIR -64 144 11 249 366 99 30 chr5 173068347 173068579 -26561571 - L2 LINE L2 -1027 2287 2040 288 264 0 0 chr5 173068628 173068700 -26561450 + L2 LINE L2 3242 3313 0 408 251 109 44 chr5 173069004 173069187 -26560963 - L2 LINE L2 0 3313 3119 309 284 43 35 chr5 173069730 173069871 -26560279 + MIR SINE MIR 71 212 -50 695 122 17 44 chr5 173070082 173070263 -26559887 + CT-rich Low_complexity Low_complexity 4 179 0 740 146 0 7 chr5 173070274 173070296 -26559854 + (TTCC)n Simple_repeat Simple_repeat 1 22 -121 3584 53 0 7 chr5 173070296 173070747 -26559403 + LTR7 LTR ERV1 1 448 -2 740 146 0 7 chr5 173070747 173070868 -26559282 + (TTCC)n Simple_repeat Simple_repeat 22 143 0 1018 180 21 5 chr5 173070868 173071057 -26559093 - AluJb SINE Alu -3 309 118 25 0 0 0 chr5 173071057 173071082 -26559068 + AT_rich Low_complexity Low_complexity 1 25 0 2275 123 0 0 chr5 173071086 173071396 -26558754 - AluSg SINE Alu 0 310 1 2227 95 14 0 chr5 173071403 173071688 -26558462 - AluSq SINE Alu -24 289 1 674 203 17 0 chr5 173071695 173071813 -26558337 - AluSq/x SINE Alu -189 124 5 2245 112 0 0 chr5 173071818 173072122 -26558028 - AluSx SINE Alu -2 310 7 1710 153 3 52 chr5 173072136 173072444 -26557706 - AluJb SINE Alu -19 293 1 1489 180 9 46 chr5 173072814 173073141 -26557009 + MER33 DNA MER1_type 10 324 0 227 254 0 0 chr5 173073141 173073195 -26556955 - MER117 DNA MER1_type -107 90 37 2174 101 47 3 chr5 173073290 173073588 -26556562 + AluSx SINE Alu 2 312 0 336 279 66 38 chr5 173073613 173073796 -26556354 - MER5A DNA MER1_type -1 188 1 190 295 26 26 chr5 173073826 173073904 -26556246 - MIR SINE MIR -106 102 25 252 59 0 0 chr5 173074243 173074277 -26555873 + (TTTTG)n Simple_repeat Simple_repeat 1 34 0 1345 142 30 109 chr5 173074279 173074582 -26555568 - AluJo SINE Alu -33 279 1 309 202 44 0 chr5 173074591 173074659 -26555491 + MIR SINE MIR 87 147 -61 236 269 104 0 chr5 173074727 173074794 -26555356 - MIR SINE MIR -103 105 32 218 330 53 0 chr5 173074955 173075049 -26555101 - L2 LINE L2 0 3272 3174 256 318 0 0 chr5 173075150 173075235 -26554915 - MIR SINE MIR 0 262 178 314 95 0 0 chr5 173075237 173075279 -26554871 - Alu SINE Alu -259 42 1 1731 141 35 17 chr5 173075558 173075848 -26554302 + AluSx SINE Alu 1 295 -17 2297 97 3 0 chr5 173075851 173076149 -26554001 + AluY SINE Alu 1 299 -12 396 243 37 105 chr5 173076317 173076369 -26553781 - L1MC4 LINE L1 -5 8037 7983 2138 116 13 3 chr5 173076369 173076670 -26553480 + AluSp SINE Alu 1 304 -9 396 243 37 105 chr5 173076670 173076851 -26553299 - L1MC4 LINE L1 -59 7983 7820 342 247 24 0 chr5 173076877 173076962 -26553188 - L1ME2 LINE L1 -10 6154 6068 465 133 0 0 chr5 173076983 173077058 -26553092 + (TCCCC)n Simple_repeat Simple_repeat 5 79 0 264 191 0 0 chr5 173077058 173077105 -26553045 - MER66B LTR ERV1 -145 341 295 2219 212 38 21 chr5 173077107 173077641 -26552509 - L1ME2 LINE L1 -189 5975 5433 2402 87 3 0 chr5 173077956 173078267 -26551883 + AluSp SINE Alu 1 312 -1 236 275 122 53 chr5 173078282 173078413 -26551737 + MIR3 SINE MIR 48 187 -21 406 310 0 9 chr5 173078600 173078716 -26551434 + MIR SINE MIR 37 151 -111 994 100 0 3 chr5 173078910 173079119 -26551031 + AluSx SINE Alu 2 280 -32 267 152 0 0 chr5 173079119 173079165 -26550985 + (TA)n Simple_repeat Simple_repeat 2 47 0 302 311 128 14 chr5 173079165 173079313 -26550837 - MIR3 SINE MIR -13 195 31 2348 85 0 3 chr5 173079551 173079857 -26550293 + AluSx SINE Alu 1 305 -7 1955 150 10 0 chr5 173080412 173080718 -26549432 + AluSx SINE Alu 1 309 -3 692 106 15 23 chr5 173080957 173081089 -26549061 + (TTCC)n Simple_repeat Simple_repeat 1 131 0 1840 127 27 7 chr5 173081089 173081389 -26548761 - AluSq SINE Alu -7 306 1 206 274 0 0 chr5 173082234 173082285 -26547865 + MIR SINE MIR 150 200 -62 351 0 0 0 chr5 173082812 173082851 -26547299 + (TG)n Simple_repeat Simple_repeat 1 39 0 1648 157 0 7 chr5 173082907 173083181 -26546969 + AluJb SINE Alu 3 274 -38 252 59 0 0 chr5 173083208 173083242 -26546908 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1478 206 3 3 chr5 173083246 173083533 -26546617 - AluJo SINE Alu -25 287 1 242 343 131 0 chr5 173083541 173083640 -26546510 - L2 LINE L2 -6 3266 3155 1091 181 23 9 chr5 173083656 173083871 -26546279 + MLT1D LTR MaLR 1 218 -287 273 136 23 0 chr5 173083873 173083917 -26546233 + Alu SINE Alu 2 46 -254 236 121 0 0 chr5 173084017 173084050 -26546100 - Alu SINE Alu -267 33 1 269 108 0 0 chr5 173084050 173084087 -26546063 - MER53 DNA DNA -152 37 1 1054 145 36 6 chr5 173084090 173084256 -26545894 + MER20 DNA MER1_type 32 202 -17 4562 107 14 0 chr5 173085637 173086144 -26544006 + MER41B LTR ERV1 1 520 -115 2050 135 0 6 chr5 173086144 173086456 -26543694 - AluSg SINE Alu 0 310 1 4562 107 14 0 chr5 173086456 173086573 -26543577 + MER41B LTR ERV1 520 634 -1 316 252 210 9 chr5 173086896 173087061 -26543089 + MIR SINE MIR 44 251 -11 204 235 0 0 chr5 173087148 173087199 -26542951 + A-rich Low_complexity Low_complexity 1 51 0 343 333 0 0 chr5 173088359 173088449 -26541701 + L1MC4 LINE L1 6614 6703 -1339 308 186 57 14 chr5 173088432 173088502 -26541648 + L1MCa LINE L1 1996 2068 -4358 * 2146 98 0 0 chr5 173088526 173088811 -26541339 - AluSq SINE Alu -28 285 1 706 157 9 17 chr5 173089062 173089177 -26540973 + AluJb SINE Alu 3 116 -196 2119 97 7 7 chr5 173089223 173089523 -26540627 - AluSq SINE Alu -13 300 1 1682 186 167 34 chr5 173089524 173090028 -26540122 + LTR49 LTR ERV1 25 595 0 375 248 109 90 chr5 173090058 173090176 -26539974 - MLT1J2 LTR MaLR -179 271 157 3688 154 19 77 chr5 173090176 173090551 -26539599 + LTR8A LTR ERV1 1 396 -331 1689 124 91 4 chr5 173090551 173090826 -26539324 + AluSg SINE Alu 1 299 -11 3688 154 19 77 chr5 173090826 173091045 -26539105 + LTR8A LTR ERV1 396 544 -183 2149 104 3 0 chr5 173091045 173091354 -26538796 + AluSq SINE Alu 1 310 -3 3688 154 19 77 chr5 173091354 173091529 -26538621 + LTR8A LTR ERV1 544 727 0 375 248 109 90 chr5 173091529 173091676 -26538474 - MLT1J2 LTR MaLR -293 157 1 442 346 22 0 chr5 173091814 173091999 -26538151 - MER117 DNA MER1_type -6 191 3 256 289 53 13 chr5 173092009 173092085 -26538065 - MIR SINE MIR -58 150 72 2039 192 61 25 chr5 173092112 173092555 -26537595 + LTR2B LTR ERV1 32 490 0 189 351 65 0 chr5 173092555 173092632 -26537518 - L2 LINE L2 -31 3282 3201 4121 137 26 8 chr5 173092654 173093303 -26536847 + MER50 LTR ERV1 1 661 -73 3509 153 15 70 chr5 173093403 173094134 -26536016 + LTR8 LTR ERV1 1 691 0 1031 171 171 39 chr5 173094140 173094397 -26535753 - MER31A LTR ERV1 0 485 195 2368 150 34 3 chr5 173094423 173094491 -26535659 - MSTD LTR MaLR 0 396 332 1897 160 3 10 chr5 173094491 173094803 -26535347 + AluJo SINE Alu 1 310 -2 2368 150 34 3 chr5 173094803 173094925 -26535225 - MSTD LTR MaLR -64 332 215 1957 108 3 62 chr5 173094925 173095248 -26534902 - AluSx SINE Alu -8 304 1 2368 150 34 3 chr5 173095248 173095435 -26534715 - MSTD LTR MaLR -181 215 6 425 246 71 48 chr5 173095440 173095566 -26534584 - MER31B LTR ERV1 -337 129 1 289 398 0 50 chr5 173095571 173095810 -26534340 - L2 LINE L2 -196 3076 2850 1992 244 71 25 chr5 173095816 173096325 -26533825 - MLT1H LTR MaLR 0 549 18 180 239 239 39 chr5 173096358 173096488 -26533662 - L2 LINE L2 -453 2861 2706 961 211 4 52 chr5 173096502 173096753 -26533397 + AluJo SINE Alu 60 298 -14 1287 104 0 0 chr5 173096900 173097083 -26533067 + AluSp SINE Alu 128 310 -3 490 226 117 22 chr5 173097991 173098128 -26532022 + MLT1H LTR MaLR 94 243 -306 2200 74 0 3 chr5 173099342 173099649 -26530501 - AluSq SINE Alu 0 306 1 180 0 0 0 chr5 173099650 173099670 -26530480 + (T)n Simple_repeat Simple_repeat 1 20 0 394 287 28 21 chr5 173199824 173199967 -26430183 + MIR3 SINE MIR 24 167 -41 323 257 20 10 chr5 173200107 173200208 -26429942 - L2 LINE L2 -2 3270 3169 26 0 0 0 chr5 173200252 173200278 -26429872 + AT_rich Low_complexity Low_complexity 1 26 0 2743 3 0 0 chr5 173200343 173200669 -26429481 - AluYb8 SINE Alu 0 326 1 22 0 0 0 chr5 173200670 173200692 -26429458 + AT_rich Low_complexity Low_complexity 1 22 0 418 346 49 5 chr5 173202205 173202410 -26427740 - MIR SINE MIR -36 226 13 279 0 0 0 chr5 173203160 173203191 -26426959 + (TG)n Simple_repeat Simple_repeat 2 32 0 29 0 0 0 chr5 173203520 173203549 -26426601 + AT_rich Low_complexity Low_complexity 1 29 0 250 308 0 3 chr5 173204007 173204103 -26426047 - MIR SINE MIR -58 150 54 1001 77 36 6 chr5 173204122 173204290 -26425860 + (TTTC)n Simple_repeat Simple_repeat 2 174 0 212 133 44 0 chr5 173204291 173204336 -26425814 + CT-rich Low_complexity Low_complexity 2 48 0 1283 161 189 16 chr5 173204340 173204588 -26425562 - AluJo SINE Alu -11 291 1 1904 169 6 13 chr5 173204982 173205296 -26424854 - AluJb SINE Alu 0 312 1 530 28 28 0 chr5 173206223 173206294 -26423856 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 2450 90 15 0 chr5 173206294 173206627 -26423523 - L1PA8 LINE L1 -21 6151 5814 939 204 0 15 chr5 173207431 173207627 -26422523 - L1MB8 LINE L1 -1 6177 5985 198 239 43 130 chr5 173207737 173207875 -26422275 + MIR SINE MIR 107 232 -30 294 167 0 0 chr5 173207875 173207923 -26422227 - 5S rRNA rRNA -73 48 1 787 130 0 0 chr5 173208940 173209055 -26421095 + AluJo SINE Alu 1 115 -187 1877 145 55 30 chr5 173209055 173209420 -26420730 + THE1C LTR MaLR 1 375 0 9790 125 27 35 chr5 173209422 173210971 -26419179 + THE1C-int LTR MaLR 3 1538 -42 37 0 0 0 chr5 173210985 173211022 -26419128 + AT_rich Low_complexity Low_complexity 1 37 0 9285 52 6 168 chr5 173211022 173212659 -26417491 - SVA Other Other -6 1380 10 1018 104 0 0 chr5 173212730 173212864 -26417286 - LTR10D LTR ERV1 0 513 380 1813 161 55 11 chr5 173212867 173213214 -26416936 + THE1C LTR MaLR 14 375 0 604 200 123 47 chr5 173213216 173213386 -26416764 + AluJo SINE Alu 112 294 -18 1892 269 56 21 chr5 173213689 173214081 -26416069 - L2 LINE L2 -8 3305 2928 444 19 0 0 chr5 173214081 173214134 -26416016 + (TG)n Simple_repeat Simple_repeat 2 54 0 1892 269 56 21 chr5 173214134 173214706 -26415444 - L2 LINE L2 -385 2928 2311 2077 108 4 0 chr5 173215050 173215318 -26414832 - AluSc SINE Alu -40 269 1 182 286 16 16 chr5 173215412 173215475 -26414675 - L2 LINE L2 0 3272 3210 1822 120 42 45 chr5 173215610 173215919 -26414231 - AluSx SINE Alu -4 308 1 422 215 81 40 chr5 173216052 173216201 -26413949 - L1ME4a LINE L1 -1 6120 5966 225 94 0 0 chr5 173217095 173217127 -26413023 + (T)n Simple_repeat Simple_repeat 1 32 0 1046 305 60 32 chr5 173217699 173218164 -26411986 + MLT1K LTR MaLR 89 566 -22 1128 240 106 29 chr5 173218263 173218613 -26411537 - LTR16C LTR ERVL -4 487 111 217 225 0 0 chr5 173218614 173218654 -26411496 + polypurine Low_complexity Low_complexity 1 40 0 609 229 23 0 chr5 173218700 173218831 -26411319 + MER103 DNA DNA 32 165 -1 1804 98 11 11 chr5 173218937 173219135 -26411015 + L1PB1 LINE L1 5888 6088 -63 2710 85 11 16 chr5 173219135 173219512 -26410638 + THE1C LTR MaLR 1 375 0 1804 98 11 11 chr5 173219512 173219577 -26410573 + L1PB1 LINE L1 6087 6151 0 23 0 0 0 chr5 173219656 173219679 -26410471 + AT_rich Low_complexity Low_complexity 1 23 0 1630 193 13 17 chr5 173219685 173219986 -26410164 + AluJb SINE Alu 1 300 -12 1245 160 141 8 chr5 173220510 173220649 -26409501 - L1 LINE L1 -850 5296 5177 198 0 0 0 chr5 173220649 173220671 -26409479 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1245 160 141 8 chr5 173220671 173220893 -26409257 - L1 LINE L1 -969 5177 4887 287 263 85 29 chr5 173221273 173221445 -26408705 + MLT1K LTR MaLR 421 583 -5 932 212 101 50 chr5 173222977 173223335 -26406815 + L2 LINE L2 2937 3312 -1 2634 73 8 14 chr5 173223449 173223806 -26406344 - THE1A LTR MaLR 0 355 1 648 24 12 0 chr5 173223806 173223890 -26406260 - THE1A-int LTR MaLR 0 1580 1496 855 106 2 7 chr5 173223993 173224129 -26406021 + pTR5 LTR ERV1 125 392 -2046 270 346 26 0 chr5 173225023 173225101 -26405049 - L2 LINE L2 -6 3266 3187 1312 153 19 5 chr5 173225253 173225462 -26404688 + AluJo SINE Alu 93 304 -8 714 224 98 23 chr5 173225777 173225991 -26404159 + MIR SINE MIR 21 250 -12 828 196 57 71 chr5 173227227 173227507 -26402643 - L2 LINE L2 -18 3295 3020 348 320 16 0 chr5 173227510 173227635 -26402515 - L2 LINE L2 -3150 164 38 609 235 34 7 chr5 173227949 173228098 -26402052 + MER103 DNA DNA 11 163 -3 285 310 0 0 chr5 173228172 173228243 -26401907 + MIR SINE MIR 83 153 -55 1325 263 20 25 chr5 173228268 173228668 -26401482 + L3 LINE CR1 607 1004 -573 265 296 51 0 chr5 173228801 173228899 -26401251 + L3 LINE CR1 1312 1414 -163 2018 85 92 11 chr5 173229627 173229910 -26400240 + AluY SINE Alu 1 306 -5 534 255 114 22 chr5 173230457 173230641 -26399509 - MER113 DNA MER1_type? -45 476 276 556 248 22 0 chr5 173230646 173230783 -26399367 + MIR SINE MIR 113 252 -10 344 256 167 39 chr5 173230902 173231058 -26399092 + MER5B DNA MER1_type 3 178 0 292 281 86 16 chr5 173231866 173231994 -26398156 + MIR SINE MIR 100 236 -26 314 366 136 5 chr5 173232774 173232995 -26397155 + MIR SINE MIR 13 262 0 336 257 29 67 chr5 173233290 173233395 -26396755 - MIR SINE MIR -63 145 45 587 112 10 0 chr5 173234744 173234842 -26395308 + (TAGA)n Simple_repeat Simple_repeat 3 101 0 184 371 14 0 chr5 173235920 173235990 -26394160 - MIR SINE MIR -87 121 51 1939 157 7 0 chr5 173236007 173236301 -26393849 + AluSx SINE Alu 5 300 -12 257 222 39 50 chr5 173237110 173237257 -26392893 - HsTC2 DNA Tc2 -34 1864 1 738 82 10 0 chr5 173237874 173237971 -26392179 + THE1B LTR MaLR 1 98 -266 327 303 28 64 chr5 173238218 173238436 -26391714 + L1MC4a LINE L1 5714 5923 -1885 206 406 0 13 chr5 173239650 173239805 -26390345 + MIR SINE MIR 41 193 -69 184 300 67 0 chr5 173239951 173240011 -26390139 - L2 LINE L2 -4 3309 3246 2545 52 3 0 chr5 173240099 173240404 -26389746 + AluY SINE Alu 1 306 -5 26 50 0 0 chr5 173240440 173240480 -26389670 + AT_rich Low_complexity Low_complexity 1 40 0 344 186 0 0 chr5 173240789 173240848 -26389302 - L2 LINE L2 -1 3312 3254 606 199 107 87 chr5 173241004 173241210 -26388940 + MER63A DNA MER1_type 1 210 0 2240 137 14 22 chr5 173241357 173241722 -26388428 + Tigger2 DNA MER2_type 2357 2718 0 261 294 67 124 chr5 173241787 173242030 -26388120 + L2 LINE L2 2717 2972 -300 1070 164 22 58 chr5 173242030 173242256 -26387894 + MER20 DNA MER1_type 2 219 0 766 261 50 0 chr5 173242263 173242443 -26387707 - MER5A DNA MER1_type 0 189 1 261 294 67 124 chr5 173242443 173242555 -26387595 + L2 LINE L2 2978 3057 -215 2582 49 3 3 chr5 173242714 173243021 -26387129 - AluY SINE Alu -4 307 1 387 0 0 0 chr5 173243641 173243684 -26386466 + (TA)n Simple_repeat Simple_repeat 1 43 0 1126 139 16 21 chr5 173243684 173243751 -26386399 - L1PA15 LINE L1 -22 6143 6077 1547 117 49 18 chr5 173243751 173243974 -26386176 + MER30 DNA MER1_type 1 230 0 1126 139 16 21 chr5 173243974 173244093 -26386057 - L1PA15 LINE L1 -88 6077 5958 449 245 110 68 chr5 173245590 173245753 -26384397 + MER5B DNA MER1_type 9 178 0 180 111 0 0 chr5 173245884 173245911 -26384239 + (T)n Simple_repeat Simple_repeat 1 27 0 199 372 24 30 chr5 173246338 173246502 -26383648 - MIR SINE MIR -41 221 59 2077 125 0 10 chr5 173246654 173246957 -26383193 + AluSq SINE Alu 2 301 -12 314 131 82 0 chr5 173247018 173247140 -26383010 + (TA)n Simple_repeat Simple_repeat 1 132 0 348 277 77 23 chr5 173247142 173247272 -26382878 + L1MC4 LINE L1 6615 6751 -1291 188 331 179 46 chr5 173248366 173248695 -26381455 + L3 LINE CR1 92 464 -1113 2725 145 0 48 chr5 173248698 173248981 -26381169 + MSTC LTR MaLR 9 265 -163 1784 102 8 8 chr5 173248981 173249225 -26380925 + AluSq SINE Alu 59 302 -11 2725 145 0 48 chr5 173249225 173249382 -26380768 + MSTC LTR MaLR 265 428 0 301 336 98 0 chr5 173249404 173249547 -26380603 + L3 LINE CR1 578 734 -843 242 86 0 0 chr5 173250066 173250101 -26380049 + Alu SINE Alu 1 35 -267 261 345 178 5 chr5 173250438 173250635 -26379515 + L3 LINE CR1 1332 1562 -15 273 29 0 0 chr5 173250640 173250674 -26379476 + (CA)n Simple_repeat Simple_repeat 2 35 0 456 245 27 41 chr5 173251414 173251561 -26378589 - MIR SINE MIR 0 262 118 323 299 13 0 chr5 173252189 173252266 -26377884 + MIR SINE MIR 50 127 -135 947 144 0 13 chr5 173252273 173252426 -26377724 + AluSg/x SINE Alu 119 269 -41 362 255 0 21 chr5 173252744 173252758 -26377392 - L1MC4 LINE L1 -1337 6705 6692 2424 66 0 3 chr5 173252758 173253047 -26377103 + AluY SINE Alu 1 288 -23 362 255 0 21 chr5 173253047 173253126 -26377024 - L1MC4 LINE L1 -1350 6692 6614 * 382 256 0 0 chr5 173253050 173253140 -26377010 + L1MC4 LINE L1 6614 6703 -1339 351 289 0 0 chr5 173253154 173253244 -26376906 + L1MC4 LINE L1 6614 6703 -1339 304 307 23 0 chr5 173253178 173253266 -26376884 - L1MC4 LINE L1 -1339 6703 6614 * 559 309 32 18 chr5 173253395 173253615 -26376535 - MIR SINE MIR -24 238 16 220 296 0 0 chr5 173254696 173254750 -26375400 + L2 LINE L2 3181 3234 -38 24 53 0 0 chr5 173255476 173255514 -26374636 + AT_rich Low_complexity Low_complexity 1 38 0 246 379 0 0 chr5 173255744 173255831 -26374319 + MIR SINE MIR 42 128 -80 319 304 158 13 chr5 173255872 173256030 -26374120 + MIR SINE MIR 3 183 -79 1908 194 40 3 chr5 173256261 173256618 -26373532 - MSTB1 LTR MaLR 0 419 63 468 307 0 0 chr5 173256929 173257043 -26373107 + MER81 DNA DNA 1 114 0 1209 288 80 37 chr5 173257449 173258445 -26371705 + L1MCc LINE L1 1301 2549 -4573 276 233 48 19 chr5 173258446 173258549 -26371601 + L1MCc LINE L1 2588 2693 -4429 356 318 78 33 chr5 173258570 173258812 -26371338 + L1MCc LINE L1 2746 2998 -4124 345 285 15 8 chr5 173258837 173258967 -26371183 + L1MCc LINE L1 3002 3132 -3809 1089 223 27 65 chr5 173258967 173259259 -26370891 - MLT1A1 LTR MaLR 0 365 85 34660 70 2 2 chr5 173259367 173263821 -26366329 - L1P LINE L1 -1692 4454 1 14739 134 18 22 chr5 173263818 173266212 -26363938 - L1P LINE L1 -3753 2393 11 * 789 288 84 66 chr5 173266324 173266872 -26363278 + MLT1K LTR MaLR 16 573 -15 446 200 80 0 chr5 173267454 173267554 -26362596 + MER81 DNA DNA 7 114 0 704 229 23 23 chr5 173268078 173268253 -26361897 + MER5B DNA MER1_type 4 178 0 7669 55 0 0 chr5 173268862 173270489 -26359661 + L1PA6 LINE L1 4515 6144 -10 717 322 63 47 chr5 173271402 173271966 -26358184 + L2 LINE L2 2722 3313 0 510 315 27 31 chr5 173272157 173272267 -26357883 + MIR SINE MIR 11 120 -142 2748 144 31 5 chr5 173272267 173272684 -26357466 - MSTA LTR MaLR 0 428 1 510 315 27 31 chr5 173272684 173272823 -26357327 + MIR SINE MIR 120 262 0 2776 188 16 77 chr5 173272841 173273449 -26356701 + MER90 LTR ERV1 3 573 -2 500 293 165 7 chr5 173273465 173273683 -26356467 - MIR SINE MIR 0 262 11 214 290 0 0 chr5 173273863 173273925 -26356225 - L2 LINE L2 -89 3224 3163 330 301 135 13 chr5 173274650 173274806 -26355344 + MIR SINE MIR 86 260 -2 510 307 58 19 chr5 173275001 173275206 -26354944 + MIR SINE MIR 47 259 -3 300 91 0 0 chr5 173275206 173275250 -26354900 + (CAT)n Simple_repeat Simple_repeat 2 45 0 236 167 0 19 chr5 173275497 173275551 -26354599 + GA-rich Low_complexity Low_complexity 2 54 0 280 315 169 22 chr5 173275561 173275745 -26354405 + MIR SINE MIR 39 249 -13 351 98 0 0 chr5 173276264 173276325 -26353825 + (CA)n Simple_repeat Simple_repeat 2 62 0 2122 80 29 4 chr5 173276325 173276599 -26353551 - AluSp SINE Alu -32 281 1 180 259 185 0 chr5 173276877 173276931 -26353219 + L3 LINE CR1 280 343 -1234 854 324 66 32 chr5 173277011 173277421 -26352729 - MLT1K LTR MaLR -162 426 3 369 43 0 0 chr5 173277559 173277606 -26352544 + (CA)n Simple_repeat Simple_repeat 1 47 0 403 267 117 0 chr5 173277845 173277965 -26352185 + L2 LINE L2 3180 3313 0 1914 227 13 16 chr5 173278685 173279068 -26351082 - MLT1G LTR MaLR 0 590 209 710 235 84 50 chr5 173279041 173279279 -26350871 - MLT1L LTR MaLR -368 247 2 * 258 81 0 0 chr5 173279530 173279567 -26350583 + (TG)n Simple_repeat Simple_repeat 2 38 0 467 244 70 19 chr5 173279598 173279754 -26350396 - MER103 DNA DNA -1 165 2 2270 90 3 0 chr5 173279850 173280140 -26350010 - AluY SINE Alu -20 291 1 234 0 0 0 chr5 173280304 173280330 -26349820 + (CA)n Simple_repeat Simple_repeat 2 27 0 204 125 0 0 chr5 173280332 173280364 -26349786 + (TATATG)n Simple_repeat Simple_repeat 2 33 0 907 309 32 25 chr5 173281058 173281459 -26348691 + MLT1K LTR MaLR 168 571 -17 1090 214 5 0 chr5 173282133 173282325 -26347825 + MER58A DNA MER1_type 31 223 -1 350 293 140 31 chr5 173282390 173282612 -26347538 - MIR SINE MIR -16 246 1 1916 144 18 0 chr5 173283264 173283548 -26346602 - AluSq SINE Alu -24 289 1 540 282 59 18 chr5 173284435 173284605 -26345545 + MER5A DNA MER1_type 7 183 -6 400 290 191 8 chr5 173284680 173284811 -26345339 + MER91A DNA MER1_type 20 174 -22 395 198 44 55 chr5 173284816 173284907 -26345243 + MER91A DNA MER1_type 106 195 -1 277 288 20 75 chr5 173285655 173285801 -26344349 - L3 LINE CR1 -14 1563 1426 197 93 74 0 chr5 173286226 173286280 -26343870 + (TA)n Simple_repeat Simple_repeat 2 59 0 2424 87 0 3 chr5 173286516 173286826 -26343324 + AluY SINE Alu 1 309 -2 190 300 93 21 chr5 173287485 173287625 -26342525 + L2 LINE L2 2815 2964 -308 2624 53 0 0 chr5 173288372 173288675 -26341475 + AluY SINE Alu 1 303 -8 387 282 80 36 chr5 173288758 173288944 -26341206 - MIR SINE MIR -34 228 34 475 335 106 9 chr5 173288976 173289194 -26340956 + MIR SINE MIR 20 258 -4 213 343 142 8 chr5 173290239 173290373 -26339777 - L2 LINE L2 -15 3257 3106 546 302 75 27 chr5 173290678 173291012 -26339138 - L1ME4a LINE L1 -202 5919 5570 2167 121 6 10 chr5 173291298 173291611 -26338539 - AluSx SINE Alu 0 312 1 195 129 0 0 chr5 173292335 173292366 -26337784 + (GA)n Simple_repeat Simple_repeat 2 32 0 317 249 0 12 chr5 173292922 173293098 -26337052 + CT-rich Low_complexity Low_complexity 1 173 0 327 306 24 32 chr5 173293352 173293476 -26336674 - L2 LINE L2 -1 3271 3149 231 238 95 24 chr5 173293668 173293752 -26336398 + MLT1K LTR MaLR 197 286 -302 374 57 19 0 chr5 173293759 173293812 -26336338 + (TC)n Simple_repeat Simple_repeat 1 54 0 23 33 0 0 chr5 173294155 173294185 -26335965 + AT_rich Low_complexity Low_complexity 1 30 0 308 228 76 0 chr5 173295083 173295162 -26334988 - HsTC2 DNA Tc2 -14 1884 1800 313 109 156 0 chr5 173295573 173295637 -26334513 - HsTC2 DNA Tc2 -1824 74 1 207 0 0 0 chr5 173295706 173295729 -26334421 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 331 276 264 12 chr5 173295907 173296161 -26333989 + L2 LINE L2 2362 2679 -635 1037 131 6 0 chr5 173296169 173296345 -26333805 + (TCCA)n Simple_repeat Simple_repeat 4 180 0 365 281 42 0 chr5 173296353 173296449 -26333701 - L2 LINE L2 -14 3299 3200 390 217 16 38 chr5 173296859 173297043 -26333107 + (TA)n Simple_repeat Simple_repeat 1 180 0 469 235 52 0 chr5 173297536 173297651 -26332499 + L2 LINE L2 3188 3308 -5 253 178 0 0 chr5 173297667 173297712 -26332438 - MER117 DNA MER1_type -152 45 1 240 244 244 30 chr5 173298229 173298364 -26331786 - L2 LINE L2 0 3313 3150 501 243 152 40 chr5 173298386 173298682 -26331468 - L2 LINE L2 -1436 1878 1550 350 293 46 63 chr5 173299885 173300124 -26330026 + L3 LINE CR1 1334 1568 -9 2436 70 0 19 chr5 173301270 173301583 -26328567 - AluY SINE Alu -4 307 1 1805 204 96 3 chr5 173301666 173302029 -26328121 - MLT2C1 LTR ERVL 0 397 1 560 307 78 68 chr5 173302094 173302794 -26327356 + L2 LINE L2 2564 3268 -4 328 296 121 15 chr5 173303111 173303310 -26326840 + MER102a DNA MER1_type 86 305 -25 305 203 16 16 chr5 173306664 173306728 -26323422 - LTR67 LTR ERVL -4 553 490 507 33 0 0 chr5 173309041 173309102 -26321048 + (CA)n Simple_repeat Simple_repeat 2 62 0 358 295 33 8 chr5 173309915 173310037 -26320113 + MER113 DNA MER1_type? 394 518 -3 948 185 12 0 chr5 173310816 173310978 -26319172 + MER5A DNA MER1_type 26 189 0 423 286 109 42 chr5 173311885 173312077 -26318073 - MIR SINE MIR -42 220 16 262 259 107 30 chr5 173312980 173313111 -26317039 - MIR SINE MIR -24 238 98 5767 53 4 1 chr5 173313165 173313842 -26316308 - L1PA7 LINE L1 0 6154 5476 882 246 9 53 chr5 173313849 173314077 -26316073 - MER58A DNA MER1_type 0 224 7 690 260 113 17 chr5 173314091 173314383 -26315767 - MER5C DNA MER1_type 0 324 5 472 282 132 52 chr5 173314428 173314778 -26315372 - MLT1L LTR MaLR -101 479 122 183 349 114 45 chr5 173315082 173315214 -26314936 - MIR3 SINE MIR -66 142 2 392 256 0 35 chr5 173315373 173315514 -26314636 + MER81 DNA DNA 4 114 0 192 255 36 146 chr5 173315850 173316042 -26314108 + MER5A DNA MER1_type 1 171 -18 238 241 37 0 chr5 173316153 173316207 -26313943 + CT-rich Low_complexity Low_complexity 3 58 0 424 326 118 5 chr5 173319483 173319670 -26310480 + MIR SINE MIR 55 262 0 280 229 0 83 chr5 173320456 173320565 -26309585 - MER113 DNA MER1_type? -254 267 168 393 210 24 48 chr5 173320678 173320802 -26309348 - MIR SINE MIR -70 138 18 279 93 0 0 chr5 173322352 173322395 -26307755 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 358 245 149 0 chr5 173322396 173322490 -26307660 - L2 LINE L2 -12 3301 3194 923 203 17 11 chr5 173322497 173322674 -26307476 - MER45A DNA AcHobo 0 178 1 299 246 228 11 chr5 173323644 173323844 -26306306 + MIR SINE MIR 19 262 0 248 309 21 21 chr5 173324160 173324254 -26305896 - MIR SINE MIR -106 156 63 534 274 17 45 chr5 173324621 173324800 -26305350 + MIR SINE MIR 31 204 -58 309 248 115 26 chr5 173325195 173325308 -26304842 + L2 LINE L2 3137 3259 -13 709 269 114 26 chr5 173325485 173325827 -26304323 - L2 LINE L2 -1 3312 2941 23 0 0 0 chr5 173327136 173327159 -26302991 + AT_rich Low_complexity Low_complexity 1 23 0 841 197 0 0 chr5 173327159 173327286 -26302864 - FLAM_C SINE Alu -14 129 3 1961 141 7 10 chr5 173327386 173327692 -26302458 - AluJb SINE Alu -7 305 1 348 190 0 0 chr5 173327708 173327787 -26302363 + CT-rich Low_complexity Low_complexity 4 82 0 246 316 103 17 chr5 173327996 173328113 -26302037 + L2 LINE L2 3146 3272 0 1770 199 120 33 chr5 173328642 173329099 -26301051 - MLT1D LTR MaLR 0 505 9 25 31 0 0 chr5 173329144 173329176 -26300974 + AT_rich Low_complexity Low_complexity 1 32 0 1983 149 7 0 chr5 173329229 173329541 -26300609 + AluSx SINE Alu 1 314 0 538 283 76 5 chr5 173329722 173329906 -26300244 - L1ME3 LINE L1 0 6162 5966 870 216 6 6 chr5 173329914 173330095 -26300055 - L1ME3 LINE L1 -326 5836 5656 361 257 0 48 chr5 173331224 173331329 -26298821 + L2 LINE L2 3210 3309 -4 2136 122 7 0 chr5 173331676 173331972 -26298178 - AluSx SINE Alu -12 300 3 251 143 0 0 chr5 173332079 173332121 -26298029 + (TCCCC)n Simple_repeat Simple_repeat 5 46 0 187 212 0 0 chr5 173335590 173335623 -26294527 - L2 LINE L2 -10 3262 3230 226 181 14 56 chr5 173335759 173335831 -26294319 + L1ME LINE L1 5813 5881 -240 1961 190 20 29 chr5 173336109 173336619 -26293531 + L1MB4 LINE L1 4826 5330 -816 1483 163 29 7 chr5 173336609 173336915 -26293235 + L1MB4 LINE L1 5761 6073 -107 * 1001 206 0 19 chr5 173338179 173338388 -26291762 - MER3 DNA MER1_type 0 209 5 866 234 132 43 chr5 173338580 173338951 -26291199 - MLT1I LTR MaLR -4 405 2 227 213 0 0 chr5 173339541 173339588 -26290562 + MER81 DNA DNA 1 47 -67 423 312 50 28 chr5 173339681 173339963 -26290187 + MER102b DNA MER1_type 36 323 -18 550 236 11 107 chr5 173339965 173340072 -26290078 + MER5B DNA MER1_type 18 103 -75 2946 161 23 7 chr5 173340072 173340645 -26289505 - L1MB4 LINE L1 0 6180 5599 550 236 11 107 chr5 173340645 173340715 -26289435 + MER5B DNA MER1_type 103 178 0 247 339 31 15 chr5 173341817 173341947 -26288203 - MLT1K LTR MaLR -455 133 2 685 298 18 57 chr5 173341951 173342010 -26288140 - L3 LINE CR1 -509 1068 1008 827 237 14 24 chr5 173342010 173342221 -26287929 + MER3 DNA MER1_type 1 209 0 685 298 18 57 chr5 173342221 173342440 -26287710 - L3 LINE CR1 -569 1008 801 419 273 40 13 chr5 173342853 173343003 -26287147 - L1ME LINE L1 -5870 200 47 201 74 0 0 chr5 173345796 173345823 -26284327 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1305 165 11 33 chr5 173345823 173346096 -26284054 + L1MA4 LINE L1 5897 6163 -137 1135 121 5 0 chr5 173346096 173346280 -26283870 + L1MA4 LINE L1 6101 6291 -9 24 0 0 0 chr5 173346281 173346305 -26283845 + AT_rich Low_complexity Low_complexity 1 24 0 483 260 76 36 chr5 173346441 173346664 -26283486 - L2 LINE L2 -98 3215 2984 2548 253 61 42 chr5 173346665 173347535 -26282615 - L2 LINE L2 -497 2817 1932 685 212 34 119 chr5 173347550 173347804 -26282346 + L1ME2 LINE L1 2070 2220 -3995 1976 148 0 0 chr5 173347804 173348115 -26282035 + AluY SINE Alu 1 311 0 685 212 34 119 chr5 173348115 173348355 -26281795 + L1ME2 LINE L1 2220 2479 -3736 2003 236 24 45 chr5 173348374 173349036 -26281114 + L1ME2 LINE L1 5495 6142 -91 423 368 11 11 chr5 173349309 173349499 -26280651 - MIR SINE MIR -70 192 3 22 35 0 0 chr5 173350049 173350078 -26280072 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 173350450 173350472 -26279678 + AT_rich Low_complexity Low_complexity 1 22 0 2563 110 6 3 chr5 173351185 173351548 -26278602 - THE1B LTR MaLR 0 364 1 6330 129 13 7 chr5 173351548 173352549 -26277601 - THE1B-int LTR MaLR 0 1580 574 1904 206 28 28 chr5 173352877 173353347 -26276803 - L1MC3 LINE L1 -6 7779 7310 322 337 163 5 chr5 173353413 173353609 -26276541 + MIR SINE MIR 33 259 -3 195 266 51 25 chr5 173353651 173353730 -26276420 + MIR3 SINE MIR 119 199 -9 258 311 27 0 chr5 173354277 173354351 -26275799 + MIR SINE MIR 117 192 -70 838 231 84 5 chr5 173355139 173355342 -26274808 + MER58A DNA MER1_type 1 219 -5 382 295 116 33 chr5 173356553 173356977 -26273173 + L1ME4a LINE L1 5574 6032 -89 274 354 0 0 chr5 173357710 173357789 -26272361 + MIR SINE MIR 67 145 -63 296 210 250 10 chr5 173357806 173357906 -26272244 - L2 LINE L2 -14 3299 3176 2062 150 60 34 chr5 173358041 173358559 -26271591 + MLT2A2 LTR ERVL 1 554 0 1154 199 64 0 chr5 173358771 173359067 -26271083 - MER33 DNA MER1_type -2 322 8 221 239 57 23 chr5 173359137 173359225 -26270925 - L2 LINE L2 -615 2699 2609 560 286 28 28 chr5 173360094 173360276 -26269874 + MER5A DNA MER1_type 1 182 -7 228 355 0 13 chr5 173360314 173360390 -26269760 + MIR SINE MIR 20 94 -114 199 232 241 27 chr5 173360501 173360613 -26269537 + MIR SINE MIR 16 151 -57 1028 106 168 62 chr5 173360742 173360950 -26269200 - MER30 DNA MER1_type 0 230 1 531 208 27 20 chr5 173361011 173361160 -26268990 + MER104 DNA Tc2 28 177 -3 240 100 0 0 chr5 173361319 173361359 -26268791 - L1PA6 LINE L1 -1 6153 6114 380 277 0 0 chr5 173361779 173361880 -26268270 + FLAM_A SINE Alu 31 131 -2 417 262 67 13 chr5 173361959 173362108 -26268042 + L1ME4a LINE L1 5725 5881 -240 2318 130 22 8 chr5 173362222 173362592 -26267558 + THE1C LTR MaLR 1 375 0 731 244 79 96 chr5 173363138 173363295 -26266855 - MLT1J LTR MaLR -14 497 339 851 281 71 35 chr5 173363295 173363690 -26266460 + MLT1I LTR MaLR 1 409 0 731 244 79 96 chr5 173363690 173363937 -26266213 - MLT1J LTR MaLR -172 339 100 26 64 0 0 chr5 173364052 173364099 -26266051 + AT_rich Low_complexity Low_complexity 1 47 0 342 303 9 9 chr5 173365011 173365120 -26265030 - MIR SINE MIR -27 235 127 1352 249 116 39 chr5 173365180 173365638 -26264512 + MLT1H LTR MaLR 44 536 -13 383 294 20 10 chr5 173365651 173365753 -26264397 - MIR SINE MIR -133 129 27 318 284 20 20 chr5 173365878 173365980 -26264170 + MIR SINE MIR 111 212 -50 534 291 252 9 chr5 173366849 173367186 -26262964 - L2 LINE L2 -1 3271 2853 552 326 115 40 chr5 173367290 173367959 -26262191 + L2 LINE L2 2393 3141 -172 1965 109 7 0 chr5 173367959 173368233 -26261917 + AluSx SINE Alu 36 311 -1 552 326 115 40 chr5 173368233 173368399 -26261751 + L2 LINE L2 3141 3293 -20 233 292 146 39 chr5 173368571 173368701 -26261449 + MIR SINE MIR 55 198 -64 23 78 0 0 chr5 173368782 173368833 -26261317 + AT_rich Low_complexity Low_complexity 1 51 0 216 0 0 0 chr5 173369247 173369271 -26260879 + (CA)n Simple_repeat Simple_repeat 2 25 0 330 275 37 9 chr5 173369411 173369520 -26260630 - L1MC/D LINE L1 -1986 5822 5711 269 295 126 39 chr5 173369613 173369867 -26260283 - L1MC/D LINE L1 -553 5568 5293 1277 211 15 0 chr5 173370155 173370420 -26259730 - MLT1E LTR MaLR 0 593 325 209 178 67 0 chr5 173370440 173370485 -26259665 + GA-rich Low_complexity Low_complexity 3 50 0 654 239 63 6 chr5 173370513 173370672 -26259478 - MLT1E LTR MaLR -418 175 8 234 174 0 0 chr5 173371701 173371747 -26258403 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 186 43 0 0 chr5 173371825 173371848 -26258302 + (CA)n Simple_repeat Simple_repeat 2 24 0 231 226 85 19 chr5 173371909 173372015 -26258135 - L1ME LINE L1 -303 5818 5706 608 304 34 5 chr5 173373471 173373678 -26256472 - MIR SINE MIR -15 247 35 656 220 75 71 chr5 173374217 173374512 -26255638 - L1ME1 LINE L1 -17 6149 5854 2104 203 22 51 chr5 173374676 173375123 -26255027 - L1ME1 LINE L1 -303 5863 5435 2878 3 0 0 chr5 173375123 173375434 -26254716 - AluYa5 SINE Alu 0 311 1 2104 203 22 51 chr5 173375434 173375571 -26254579 - L1ME1 LINE L1 -731 5435 5296 180 305 179 11 chr5 173375699 173375794 -26254356 - L2 LINE L2 0 3272 3162 2161 241 11 5 chr5 173376036 173376600 -26253550 + L1ME1 LINE L1 4017 4583 -1563 652 181 125 6 chr5 173376600 173376760 -26253390 + MER39 LTR ERV1 1 179 -528 417 210 30 20 chr5 173376786 173376886 -26253264 + MER39 LTR ERV1 325 425 -282 1118 225 25 12 chr5 173376892 173377212 -26252938 + L1ME1 LINE L1 4940 5263 -883 * 1661 171 51 3 chr5 173377209 173377560 -26252590 + L1ME1 LINE L1 5560 5927 -239 334 337 96 12 chr5 173377561 173377727 -26252423 + L1MB8 LINE L1 5998 6177 -1 759 293 5 5 chr5 173378425 173378616 -26251534 + MIR SINE MIR 2 192 -70 218 222 56 0 chr5 173378679 173378733 -26251417 + MIR SINE MIR 206 262 0 222 118 0 0 chr5 173379800 173379834 -26250316 + (TTTC)n Simple_repeat Simple_repeat 2 35 0 261 321 36 12 chr5 173380663 173380747 -26249403 - MIR3 SINE MIR -37 171 86 258 317 20 10 chr5 173381119 173381220 -26248930 + MIR SINE MIR 36 137 -71 740 302 21 13 chr5 173381374 173381609 -26248541 - MIR SINE MIR -16 246 10 21 0 0 0 chr5 173382117 173382138 -26248012 + AT_rich Low_complexity Low_complexity 1 21 0 2167 127 0 3 chr5 173382576 173382883 -26247267 - AluSq SINE Alu -5 308 3 542 311 56 53 chr5 173382891 173383303 -26246847 + Charlie8 DNA MER1_type 55 467 -1950 184 371 0 29 chr5 173383697 173383767 -26246383 + MIR3 SINE MIR 8 75 -133 269 208 128 10 chr5 173383770 173383899 -26246251 - LTR16C LTR ERVL 0 491 318 542 275 24 0 chr5 173384115 173384282 -26245868 + MIR SINE MIR 86 256 -6 553 272 73 9 chr5 173384520 173384752 -26245398 + MER102b DNA MER1_type 94 340 -1 442 298 36 60 chr5 173385659 173385759 -26244391 - MLT1K LTR MaLR -42 546 445 847 178 81 155 chr5 173385759 173386153 -26243997 + MLT1A1 LTR MaLR 1 365 0 442 298 36 60 chr5 173386153 173386304 -26243846 - MLT1K LTR MaLR -143 445 301 221 193 0 18 chr5 173386312 173386369 -26243781 + GA-rich Low_complexity Low_complexity 1 56 0 238 328 62 16 chr5 173386643 173386771 -26243379 - L2 LINE L2 -1 3271 3138 470 235 31 112 chr5 173386848 173387044 -26243106 - LTR16C LTR ERVL -191 300 121 294 143 0 0 chr5 173387048 173387097 -26243053 + (GGGGA)n Simple_repeat Simple_repeat 4 52 0 198 300 0 0 chr5 173387097 173387147 -26243003 + L3 LINE CR1 1517 1566 -11 186 176 0 0 chr5 173388201 173388235 -26241915 - MIR SINE MIR -109 153 120 2219 105 0 0 chr5 173388378 173388663 -26241487 + AluSx SINE Alu 1 285 -27 822 277 0 19 chr5 173390144 173390350 -26239800 - MIR SINE MIR -58 204 3 334 363 124 25 chr5 173390787 173390847 -26239303 + L3 LINE CR1 1339 1392 -185 2299 74 3 26 chr5 173390847 173391157 -26238993 + AluY SINE Alu 1 303 -8 334 363 124 25 chr5 173391157 173391297 -26238853 + L3 LINE CR1 1392 1559 -18 21 57 0 0 chr5 173391372 173391407 -26238743 + AT_rich Low_complexity Low_complexity 1 35 0 181 296 0 0 chr5 173391629 173391673 -26238477 + L3 LINE CR1 1533 1576 -1 237 139 0 0 chr5 173392046 173392089 -26238061 + (TG)n Simple_repeat Simple_repeat 1 43 0 207 235 0 0 chr5 173392195 173392246 -26237904 - L2 LINE L2 -1 3312 3262 372 208 10 21 chr5 173392359 173392455 -26237695 - MER94 DNA DNA -4 130 36 1108 264 38 44 chr5 173392932 173394084 -26236066 + L1MC/D LINE L1 1121 2460 -4662 3397 224 64 32 chr5 173394087 173395407 -26234743 + L1MC4a LINE L1 6315 7784 -1 1699 182 20 0 chr5 173395633 173395929 -26234221 + AluJb SINE Alu 5 306 -6 271 248 122 108 chr5 173396792 173397006 -26233144 + L2 LINE L2 2837 3053 -219 38 22 0 0 chr5 173397187 173397232 -26232918 + AT_rich Low_complexity Low_complexity 1 45 0 2224 100 0 7 chr5 173397301 173397600 -26232550 - AluSc SINE Alu -12 297 1 585 346 16 12 chr5 173397768 173398022 -26232128 - MIR SINE MIR -6 256 2 22 56 0 0 chr5 173399324 173399360 -26230790 + AT_rich Low_complexity Low_complexity 1 36 0 243 329 76 19 chr5 173400284 173400442 -26229708 - MER5B DNA MER1_type -11 167 1 1747 152 0 31 chr5 173400506 173400795 -26229355 - AluJb SINE Alu -32 280 1 579 269 94 12 chr5 173401026 173401197 -26228953 - MIR SINE MIR -4 258 74 1953 221 50 69 chr5 173402324 173403568 -26226582 - L1MC4 LINE L1 -871 7171 5925 349 221 189 81 chr5 173403592 173403814 -26226336 + L1MC/D LINE L1 4002 4247 -2694 424 281 30 51 chr5 173404066 173404361 -26225789 + L1MC/D LINE L1 4484 4772 -2169 270 289 51 13 chr5 173404557 173404713 -26225437 + L1P LINE L1 4079 4240 -1906 695 309 66 74 chr5 173404715 173405657 -26224493 + L1MC/D LINE L1 5028 5961 -980 295 283 23 23 chr5 173405693 173405875 -26224275 + L1MC/D LINE L1 6005 6187 -754 1745 227 67 54 chr5 173405915 173406091 -26224059 + MLT1E LTR MaLR 32 204 -389 5305 112 36 5 chr5 173406091 173407051 -26223099 - L1PA15 LINE L1 -2 6163 5204 1745 227 67 54 chr5 173407051 173407429 -26222721 + MLT1E LTR MaLR 204 593 0 915 278 31 39 chr5 173407436 173407894 -26222256 + L1MC/D LINE L1 6198 6652 -487 3533 224 45 19 chr5 173407914 173408986 -26221164 + L1MC4a LINE L1 46 1170 -5175 2094 125 17 0 chr5 173408986 173409275 -26220875 + AluSx SINE Alu 1 294 -18 3533 224 45 19 chr5 173409275 173409567 -26220583 + L1MC4a LINE L1 1170 1453 -4892 249 159 16 16 chr5 173409627 173409690 -26220460 + L1MC4a LINE L1 1746 1808 -4937 297 0 0 0 chr5 173409692 173409725 -26220425 + (CA)n Simple_repeat Simple_repeat 2 34 0 3065 219 27 8 chr5 173409738 173410823 -26219327 + L1MC4a LINE L1 2293 3398 -3166 2314 278 30 30 chr5 173410831 173411555 -26218595 + L1PA15 LINE L1 1 724 -6063 14536 207 39 21 chr5 173411659 173414280 -26215870 + L1PA15 LINE L1 1311 3883 -2933 255 31 0 0 chr5 173414280 173414312 -26215838 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 14536 207 39 21 chr5 173414312 173417086 -26213064 + L1PA15 LINE L1 3883 6816 0 371 217 50 8 chr5 173417080 173417200 -26212950 + L1MC4a LINE L1 3381 3505 -3059 * 32 0 0 0 chr5 173417851 173417883 -26212267 + AT_rich Low_complexity Low_complexity 1 32 0 2385 262 39 17 chr5 173417992 173418888 -26211262 + L1MC4a LINE L1 3609 4524 -2040 854 234 4 7 chr5 173418888 173419170 -26210980 - MLT1A1 LTR MaLR 0 365 1 2557 234 56 21 chr5 173419170 173420114 -26210036 + L1MC4a LINE L1 4520 5496 -1068 4574 174 26 12 chr5 173420347 173420639 -26209511 + L1MC2 LINE L1 4982 5268 -1076 1978 96 0 0 chr5 173420639 173420888 -26209262 + AluSq SINE Alu 2 250 -63 4574 174 26 12 chr5 173420888 173421792 -26208358 + L1MC2 LINE L1 5268 6198 -146 432 250 73 20 chr5 173421853 173422057 -26208093 + L1MC4a LINE L1 6233 6447 -1779 28 29 0 0 chr5 173422132 173422167 -26207983 + AT_rich Low_complexity Low_complexity 1 35 0 299 281 40 31 chr5 173422262 173422626 -26207524 + L1ME4a LINE L1 5639 6017 -104 254 139 0 0 chr5 173423774 173423817 -26206333 - L2 LINE L2 0 3313 3271 776 304 15 0 chr5 173423827 173424031 -26206119 + MIR SINE MIR 8 214 -48 538 335 67 29 chr5 173424073 173424566 -26205584 - L2 LINE L2 -36 3236 2660 237 290 20 10 chr5 173424815 173424915 -26205235 - LTR67 LTR ERVL -25 532 432 476 301 62 12 chr5 173425384 173425570 -26204580 + MIR SINE MIR 19 216 -46 490 331 42 6 chr5 173425570 173425736 -26204414 + MER5B DNA MER1_type 1 172 -6 714 325 91 19 chr5 173425822 173426456 -26203694 + L2 LINE L2 2636 3313 0 572 301 26 21 chr5 173427145 173427338 -26202812 + MIR SINE MIR 63 256 -6 243 0 0 0 chr5 173428771 173428798 -26201352 + (A)n Simple_repeat Simple_repeat 1 27 0 424 246 182 27 chr5 173429957 173430144 -26200006 + L2 LINE L2 3094 3309 -4 2486 61 0 3 chr5 173430171 173430468 -26199682 + AluY SINE Alu 1 296 -15 1687 162 37 27 chr5 173430485 173430782 -26199368 - AluJo SINE Alu -12 300 1 21 0 0 0 chr5 173430873 173430894 -26199256 + AT_rich Low_complexity Low_complexity 1 21 0 712 290 4 45 chr5 173431066 173431311 -26198839 - MIR SINE MIR 0 262 28 470 246 127 0 chr5 173432013 173432131 -26198019 + MIR SINE MIR 19 151 -57 489 185 89 45 chr5 173432132 173432289 -26197861 + L1MC3 LINE L1 7622 7785 0 1792 141 48 28 chr5 173432317 173432607 -26197543 - AluJo SINE Alu -16 296 1 195 139 0 0 chr5 173432943 173432979 -26197171 + (CA)n Simple_repeat Simple_repeat 2 37 0 505 271 21 83 chr5 173434068 173434308 -26195842 - L2 LINE L2 0 3313 3089 754 274 38 46 chr5 173434344 173434581 -26195569 - MIR SINE MIR -26 236 2 198 326 76 56 chr5 173434581 173434724 -26195426 - L2 LINE L2 -269 3044 2899 188 358 74 0 chr5 173435018 173435099 -26195051 + L2 LINE L2 3155 3241 -31 199 247 161 0 chr5 173436427 173436508 -26193642 - MIR3 SINE MIR -46 162 69 506 310 130 9 chr5 173436823 173437039 -26193111 - MIR SINE MIR -6 256 15 21 0 0 0 chr5 173438022 173438043 -26192107 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr5 173438524 173438547 -26191603 + (T)n Simple_repeat Simple_repeat 1 23 0 632 168 0 0 chr5 173438563 173438664 -26191486 - L1PA15 LINE L1 -24 6141 6041 423 114 0 42 chr5 173438659 173438768 -26191382 - L1P LINE L1 -829 5317 5220 * 1257 77 0 17 chr5 173439186 173439266 -26190884 + (GGGA)n Simple_repeat Simple_repeat 1 441 0 1257 77 0 17 chr5 173439266 173439635 -26190515 + (GGGA)n Simple_repeat Simple_repeat 1 362 0 26 0 0 0 chr5 173439793 173439819 -26190331 + AT_rich Low_complexity Low_complexity 1 26 0 341 404 0 0 chr5 173439819 173439913 -26190237 + T-rich Low_complexity Low_complexity 1 94 0 246 116 0 72 chr5 173440313 173440382 -26189768 + (GGAA)n Simple_repeat Simple_repeat 1 64 0 365 193 167 18 chr5 173443101 173443215 -26186935 + L1ME4a LINE L1 5991 6121 0 2245 131 0 0 chr5 173443232 173443538 -26186612 + AluSq SINE Alu 1 306 -7 2406 91 0 0 chr5 173443580 173443887 -26186263 + AluY SINE Alu 1 307 -4 448 244 110 77 chr5 173443997 173444100 -26186050 + MIR SINE MIR 15 113 -149 653 254 50 20 chr5 173444100 173444301 -26185849 + MER63A DNA MER1_type 2 208 -2 448 244 110 77 chr5 173444301 173444406 -26185744 + MIR SINE MIR 113 230 -32 227 178 0 0 chr5 173445170 173445215 -26184935 + G-rich Low_complexity Low_complexity 3 47 0 262 338 0 0 chr5 173446705 173446776 -26183374 + L2 LINE L2 3200 3270 -2 1475 231 27 48 chr5 173446904 173447277 -26182873 + MLT1A1 LTR MaLR 1 365 0 201 182 0 0 chr5 173447689 173447722 -26182428 + MIR SINE MIR 117 149 -113 333 282 0 0 chr5 173447919 173447997 -26182153 - MER117 DNA MER1_type -1 196 119 230 270 0 16 chr5 173448220 173448283 -26181867 + L2 LINE L2 3244 3305 -8 316 282 98 31 chr5 173449186 173449349 -26180801 + MIR SINE MIR 81 254 -8 520 276 132 13 chr5 173450288 173450516 -26179634 + MIR SINE MIR 2 256 -6 240 265 118 20 chr5 173450833 173450935 -26179215 - MLT1I LTR MaLR -291 118 7 914 290 47 62 chr5 173450982 173452106 -26178044 - L1MEd LINE L1 -3002 3127 2069 1831 271 90 37 chr5 173452115 173452252 -26177898 - L1MEd LINE L1 -4469 1660 1532 2085 130 0 37 chr5 173452252 173452574 -26177576 - AluSx SINE Alu -2 310 1 1831 271 90 37 chr5 173452574 173453545 -26176605 - L1MEd LINE L1 -4597 1532 499 2122 123 3 0 chr5 173454339 173454632 -26175518 + AluSg SINE Alu 1 294 -16 22 0 0 0 chr5 173454704 173454726 -26175424 + AT_rich Low_complexity Low_complexity 1 22 0 244 208 21 0 chr5 173454731 173454779 -26175371 + MIR3 SINE MIR 115 163 -45 302 364 41 0 chr5 173455068 173455189 -26174961 - MER117 DNA MER1_type -47 150 25 423 293 98 11 chr5 173455190 173455364 -26174786 - MIR SINE MIR -3 259 71 427 250 26 40 chr5 173455565 173455717 -26174433 + Charlie7 DNA MER1_type 2 151 -2461 274 232 0 42 chr5 173455730 173455825 -26174325 + Charlie7 DNA MER1_type 2519 2609 -3 1065 169 0 11 chr5 173455854 173456031 -26174119 + FRAM SINE Alu 1 174 -2 240 208 0 0 chr5 173456225 173456273 -26173877 + MIR SINE MIR 112 159 -103 282 308 0 0 chr5 173456296 173456374 -26173776 + MIR SINE MIR 106 183 -79 1422 237 54 66 chr5 173456400 173456885 -26173265 + MLT1H LTR MaLR 71 549 0 447 212 8 25 chr5 173457129 173457247 -26172903 + Charlie7 DNA MER1_type 2497 2612 0 23 54 0 0 chr5 173457545 173457582 -26172568 + AT_rich Low_complexity Low_complexity 1 37 0 428 205 24 0 chr5 173457975 173458058 -26172092 + MIR SINE MIR 168 252 -10 270 0 0 0 chr5 173458133 173458163 -26171987 + (CA)n Simple_repeat Simple_repeat 2 31 0 202 250 58 0 chr5 173458233 173458285 -26171865 - MIR SINE MIR -61 147 93 1095 187 20 15 chr5 173458699 173458902 -26171248 + MER20 DNA MER1_type 16 219 0 296 282 0 13 chr5 173458926 173459004 -26171146 + MIR SINE MIR 116 192 -70 233 296 0 49 chr5 173459953 173460034 -26170116 - MIR SINE MIR -70 138 61 385 297 0 0 chr5 173460445 173460546 -26169604 - MER117 DNA MER1_type -42 155 55 414 366 17 39 chr5 173460576 173460808 -26169342 - L2 LINE L2 -255 3058 2832 2346 203 144 37 chr5 173461062 173461658 -26168492 - MLT2F LTR ERVL 0 663 4 231 36 0 0 chr5 173461821 173461849 -26168301 + (TC)n Simple_repeat Simple_repeat 2 29 0 382 191 15 0 chr5 173463096 173463164 -26166986 - MLT1K LTR MaLR -377 211 143 1532 149 3 35 chr5 173463311 173463593 -26166557 + L1MA3 LINE L1 6032 6304 -1 460 276 115 0 chr5 173463678 173463757 -26166393 - L1ME LINE L1 -429 5692 5624 180 0 0 0 chr5 173463757 173463777 -26166373 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 460 276 115 0 chr5 173463777 173463853 -26166297 - L1ME LINE L1 -497 5624 5519 507 263 36 15 chr5 173465017 173465154 -26164996 + MIR SINE MIR 30 169 -93 556 342 72 58 chr5 173465443 173465957 -26164193 - L2 LINE L2 -338 2976 2456 759 220 60 47 chr5 173466994 173467226 -26162924 - MIR SINE MIR 0 262 28 180 111 0 0 chr5 173467627 173467654 -26162496 + (TG)n Simple_repeat Simple_repeat 2 28 0 534 303 88 1 chr5 173467877 173468087 -26162063 + MIR SINE MIR 27 250 -12 16235 121 35 9 chr5 173468159 173469463 -26160687 - Tigger1 DNA MER2_type -1 2417 1025 2186 122 0 3 chr5 173469463 173469766 -26160384 + AluSq SINE Alu 1 302 -11 16235 121 35 9 chr5 173469766 173470818 -26159332 - Tigger1 DNA MER2_type -1393 1025 1 275 363 128 49 chr5 173470922 173471288 -26158862 + L2 LINE L2 2853 3247 -25 760 257 67 76 chr5 173471290 173471753 -26158397 - MLT1L LTR MaLR -9 606 148 1819 173 60 0 chr5 173471754 173472072 -26158078 - MER58B DNA MER1_type -1 340 4 307 326 45 22 chr5 173472773 173472862 -26157288 + L3b LINE CR1 1467 1557 -26 726 349 51 46 chr5 173473607 173474277 -26155873 - L2 LINE L2 -638 2676 2004 534 231 38 94 chr5 173474419 173474631 -26155519 - MLT1H LTR MaLR -243 306 107 22 70 0 0 chr5 173476570 173476613 -26153537 + AT_rich Low_complexity Low_complexity 1 43 0 943 269 103 56 chr5 173477906 173478222 -26151928 - L2 LINE L2 -1 3312 2964 1178 227 5 0 chr5 173478222 173478438 -26151712 - MER20 DNA MER1_type -1 218 2 943 269 103 56 chr5 173478438 173478605 -26151545 - L2 LINE L2 -349 2964 2806 225 267 134 31 chr5 173479393 173479544 -26150606 + MIR SINE MIR 18 172 -58 253 298 96 0 chr5 173479748 173479842 -26150308 - L2 LINE L2 -29 3243 3141 8048 26 2 0 chr5 173479855 173480747 -26149403 + L1PA4 LINE L1 5262 6155 0 534 258 48 36 chr5 173480772 173480939 -26149211 + L2 LINE L2 3140 3308 -5 222 287 69 11 chr5 173481030 173481117 -26149033 - MIR SINE MIR -120 142 51 448 269 34 20 chr5 173481123 173481272 -26148878 - L2 LINE L2 -1 3312 3162 187 286 0 0 chr5 173482542 173482584 -26147566 - MER5A DNA MER1_type -4 185 144 1169 194 123 60 chr5 173482759 173483126 -26147024 - MER57A LTR ERV1 0 403 14 1927 121 0 8 chr5 173485802 173486067 -26144083 - AluSq SINE Alu -13 300 38 231 333 116 0 chr5 173486230 173486359 -26143791 - MIR SINE MIR -8 254 111 22 35 0 0 chr5 173486756 173486785 -26143365 + AT_rich Low_complexity Low_complexity 1 29 0 321 353 0 35 chr5 173488015 173488131 -26142019 + L2 LINE L2 3160 3271 -1 277 239 264 57 chr5 173488877 173489036 -26141114 + L2 LINE L2 3102 3293 -20 1970 248 26 6 chr5 173489165 173489705 -26140445 + L1ME3A LINE L1 5561 6111 -59 11907 27 0 1 chr5 173489763 173491922 -26138228 - L1PA3 LINE L1 -14 6141 3978 236 161 214 0 chr5 173492096 173492152 -26137998 + MIR3 SINE MIR 139 206 -2 339 284 11 11 chr5 173492462 173492557 -26137593 - MIR SINE MIR -12 250 156 200 273 18 0 chr5 173492580 173492635 -26137515 + MIR SINE MIR 95 150 -58 444 309 56 20 chr5 173492649 173492898 -26137252 + MIR SINE MIR 5 262 0 495 276 0 0 chr5 173493087 173493192 -26136958 + L2 LINE L2 3208 3312 -1 481 251 56 28 chr5 173493548 173493727 -26136423 - MLT1L LTR MaLR -22 593 410 789 288 159 20 chr5 173493768 173494272 -26135878 + MLT1L LTR MaLR 3 576 -39 370 246 94 105 chr5 173494367 173494644 -26135506 - MLT1L LTR MaLR -313 302 29 692 234 25 30 chr5 173495130 173495331 -26134819 + MIR SINE MIR 55 254 -8 226 236 112 22 chr5 173496419 173496508 -26133642 - MIR SINE MIR -93 115 19 1839 161 10 7 chr5 173496537 173496829 -26133321 + AluJb SINE Alu 1 293 -19 198 0 0 0 chr5 173496992 173497014 -26133136 + (CA)n Simple_repeat Simple_repeat 1 22 0 536 227 233 0 chr5 173497014 173497164 -26132986 - MIR SINE MIR -76 186 2 327 316 95 24 chr5 173497371 173497539 -26132611 - L2 LINE L2 -2 3270 3091 1359 315 86 27 chr5 173497544 173498281 -26131869 - L3 LINE CR1 -7 1570 791 1551 78 0 0 chr5 173498467 173498671 -26131479 + L1PA8 LINE L1 5967 6170 -2 322 330 55 103 chr5 173498964 173499255 -26130895 - L2 LINE L2 -13 3259 2983 248 272 121 23 chr5 173499400 173499657 -26130493 + L1 LINE L1 3674 3955 -2191 544 337 70 23 chr5 173499720 173500147 -26130003 + L1 LINE L1 3978 4424 -1722 231 275 74 7 chr5 173500182 173500331 -26129819 + L1 LINE L1 4437 4595 -1551 440 293 203 35 chr5 173500589 173500990 -26129160 + L1 LINE L1 2920 3417 -2729 2607 43 0 10 chr5 173500990 173501294 -26128856 - AluY SINE Alu -10 301 1 440 293 203 35 chr5 173501294 173501374 -26128776 + L1 LINE L1 3417 3482 -2664 595 297 123 3 chr5 173501456 173501806 -26128344 + L1 LINE L1 3545 3936 -2210 261 208 0 0 chr5 173502081 173502153 -26127997 + (TA)n Simple_repeat Simple_repeat 2 73 0 247 226 0 0 chr5 173502161 173502223 -26127927 + L1MC4 LINE L1 6640 6701 -1341 317 339 26 0 chr5 173502306 173502421 -26127729 - MIR SINE MIR -112 150 33 469 281 43 11 chr5 173502430 173502615 -26127535 - LTR33 LTR ERVL -330 191 1 371 297 31 8 chr5 173502623 173502751 -26127399 + MIR SINE MIR 128 258 -4 246 128 0 0 chr5 173503993 173504032 -26126118 + (T)n Simple_repeat Simple_repeat 1 39 0 428 321 33 92 chr5 173504472 173504864 -26125286 + MLT1K LTR MaLR 2 370 -218 377 306 0 55 chr5 173504955 173505254 -26124896 + GA-rich Low_complexity Low_complexity 1 282 0 216 0 0 0 chr5 173506075 173506099 -26124051 + (A)n Simple_repeat Simple_repeat 1 24 0 216 306 8 37 chr5 173506847 173506981 -26123169 + GA-rich Low_complexity Low_complexity 3 132 0 233 230 53 44 chr5 173507086 173507199 -26122951 - MER117 DNA MER1_type -28 169 56 284 277 0 0 chr5 173507812 173507877 -26122273 + L2 LINE L2 3206 3270 -2 359 319 8 25 chr5 173508112 173508231 -26121919 - L2 LINE L2 -2 3311 3195 1668 203 157 21 chr5 173508540 173509018 -26121132 - MLT1F1 LTR MaLR -2 565 23 1375 202 28 63 chr5 173509045 173509362 -26120788 + AluJb SINE Alu 4 309 -3 1168 172 60 115 chr5 173509475 173509858 -26120292 + MLT1A1 LTR MaLR 1 362 -3 727 280 133 0 chr5 173509945 173510156 -26119994 + MIR SINE MIR 3 241 -21 207 69 0 0 chr5 173510172 173510201 -26119949 + (TA)n Simple_repeat Simple_repeat 1 29 0 201 178 0 0 chr5 173511063 173511108 -26119042 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 369 198 123 0 chr5 173511198 173511279 -26118871 + MIR3 SINE MIR 90 180 -28 318 256 12 0 chr5 173511654 173511736 -26118414 + MER117 DNA MER1_type 82 164 -33 613 282 146 9 chr5 173511785 173511998 -26118152 - MIR SINE MIR -19 243 2 21 57 0 0 chr5 173512224 173512259 -26117891 + AT_rich Low_complexity Low_complexity 1 35 0 258 231 102 46 chr5 173514574 173514682 -26115468 + LTR67 LTR ERVL 434 547 -10 258 306 113 0 chr5 173514687 173514811 -26115339 + MIR SINE MIR 16 153 -55 241 191 225 0 chr5 173514864 173514953 -26115197 - MER5A DNA MER1_type -75 114 6 192 299 134 10 chr5 173515433 173515530 -26114620 - MIR SINE MIR -77 185 77 211 232 49 98 chr5 173515923 173516005 -26114145 + MIR SINE MIR 77 154 -108 632 310 43 16 chr5 173516019 173516274 -26113876 - MIR SINE MIR 0 262 1 329 303 66 0 chr5 173516410 173516532 -26113618 + MIR SINE MIR 60 189 -73 668 265 91 24 chr5 173517034 173517374 -26112776 - L1ME4a LINE L1 -238 5883 5521 357 181 14 0 chr5 173517395 173517467 -26112683 - MER116 DNA Mariner -1 79 7 2340 106 19 27 chr5 173517745 173518112 -26112038 + THE1B LTR MaLR 1 364 0 332 236 45 9 chr5 173518340 173518450 -26111700 - MER103 DNA DNA -45 121 8 11918 26 0 2 chr5 173518551 173520727 -26109423 - L1PA3 LINE L1 -1 6154 3978 236 161 214 0 chr5 173520901 173520957 -26109193 + MIR3 SINE MIR 139 206 -2 339 284 11 11 chr5 173521267 173521362 -26108788 - MIR SINE MIR -12 250 156 200 273 18 0 chr5 173521385 173521440 -26108710 + MIR SINE MIR 95 150 -58 608 315 52 24 chr5 173521454 173521705 -26108445 + MIR SINE MIR 5 262 0 211 232 49 98 chr5 173522336 173522418 -26107732 + MIR SINE MIR 77 154 -108 632 310 43 16 chr5 173522432 173522687 -26107463 - MIR SINE MIR 0 262 1 329 303 66 0 chr5 173522823 173522945 -26107205 + MIR SINE MIR 60 189 -73 668 265 91 24 chr5 173523447 173523787 -26106363 - L1ME4a LINE L1 -238 5883 5521 357 181 14 0 chr5 173523808 173523880 -26106270 - MER116 DNA Mariner -1 79 7 2334 111 16 27 chr5 173524158 173524526 -26105624 + THE1B LTR MaLR 1 364 0 332 236 45 9 chr5 173524754 173524864 -26105286 - MER103 DNA DNA -45 121 8 13423 26 1 0 chr5 173524964 173527312 -26102838 - L1PA3 LINE L1 -1 6154 3802 430 315 63 28 chr5 173527409 173527552 -26102598 - L2 LINE L2 -2 3270 3123 511 161 65 52 chr5 173527595 173527750 -26102400 + Charlie5 DNA MER1_type 34 190 -2422 1004 180 37 16 chr5 173527751 173527995 -26102155 + Charlie5 DNA MER1_type 2332 2580 -32 363 306 53 12 chr5 173528022 173528192 -26101958 - L2 LINE L2 -181 3091 2915 3400 36 2 2 chr5 173528644 173529058 -26101092 + L1PA4 LINE L1 5740 6153 -2 315 0 0 0 chr5 173529098 173529133 -26101017 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 413 309 33 48 chr5 173529140 173529251 -26100899 + MIR SINE MIR 51 159 -103 850 234 48 0 chr5 173529251 173529460 -26100690 - MER20 DNA MER1_type 0 219 1 413 309 33 48 chr5 173529460 173529558 -26100592 + MIR SINE MIR 159 257 -5 187 333 91 36 chr5 173530317 173530412 -26099738 - MIR SINE MIR -76 186 98 360 0 0 0 chr5 173530412 173530452 -26099698 + (TA)n Simple_repeat Simple_repeat 2 41 0 210 37 0 0 chr5 173530456 173530483 -26099667 + (GA)n Simple_repeat Simple_repeat 2 28 0 187 333 91 36 chr5 173530483 173530547 -26099603 - MIR SINE MIR -166 96 13 305 193 108 24 chr5 173530745 173530828 -26099322 - L2 LINE L2 -3 3310 3221 2140 197 76 8 chr5 173531034 173531507 -26098643 - MLT1D LTR MaLR 0 505 1 2289 90 0 35 chr5 173531554 173531864 -26098286 + AluSx SINE Alu 1 299 -13 252 0 0 0 chr5 173531864 173531892 -26098258 + (GGAA)n Simple_repeat Simple_repeat 1 28 0 180 239 22 0 chr5 173531971 173532017 -26098133 - L2 LINE L2 0 3313 3267 222 37 0 0 chr5 173532839 173532866 -26097284 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr5 173533902 173533923 -26096227 + AT_rich Low_complexity Low_complexity 1 21 0 2175 105 3 45 chr5 173533952 173534266 -26095884 + AluSx SINE Alu 3 303 -9 315 314 20 0 chr5 173534705 173534807 -26095343 + MIR SINE MIR 156 259 -3 716 301 20 15 chr5 173534978 173535181 -26094969 + MIR SINE MIR 6 209 -53 360 0 0 0 chr5 173535546 173535586 -26094564 + (CA)n Simple_repeat Simple_repeat 1 40 0 562 288 64 13 chr5 173537357 173537593 -26092557 + MIR SINE MIR 10 257 -5 1440 282 103 29 chr5 173538192 173538918 -26091232 - L2 LINE L2 -780 2534 1755 222 274 16 0 chr5 173538942 173539004 -26091146 - L2 LINE L2 -653 2661 2599 632 289 39 5 chr5 173539446 173539650 -26090500 + MIR SINE MIR 49 259 -3 3127 83 0 0 chr5 173539934 173540343 -26089807 + L1PA8 LINE L1 5762 6170 -2 336 310 54 8 chr5 173540433 173540562 -26089588 - MIR SINE MIR -98 164 30 464 267 23 30 chr5 173541140 173541271 -26088879 - L2 LINE L2 -1 3312 3183 1042 177 5 55 chr5 173541882 173542102 -26088048 + MER3 DNA MER1_type 1 209 0 1010 219 101 94 chr5 173543163 173543610 -26086540 - MLT1J2 LTR MaLR 0 450 1 1603 164 58 65 chr5 173543895 173544341 -26085809 - LTR47B LTR ERVL 0 443 1 2435 57 0 0 chr5 173544800 173545097 -26085053 - L1PA5 LINE L1 -1 6153 5857 274 239 46 37 chr5 173545287 173545396 -26084754 + MIR SINE MIR 149 258 -4 2980 139 65 16 chr5 173545396 173545892 -26084258 + MLT2B3 LTR ERVL 1 520 -34 236 196 0 0 chr5 173545892 173545938 -26084212 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 274 146 21 0 chr5 173545938 173545986 -26084164 + MLT2B3 LTR ERVL 506 554 0 656 302 82 31 chr5 173546108 173546399 -26083751 + MLT1K LTR MaLR 138 443 -145 195 69 0 0 chr5 173546433 173546462 -26083688 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 305 186 17 0 chr5 173546462 173546521 -26083629 + MLT1K LTR MaLR 515 574 -14 612 241 75 0 chr5 173546760 173546959 -26083191 - MLT1J2 LTR MaLR -214 236 23 381 225 34 0 chr5 173547465 173547554 -26082596 - MIR SINE MIR -90 118 27 194 241 52 0 chr5 173547812 173547870 -26082280 + L2 LINE L2 3220 3280 -33 200 247 103 41 chr5 173547969 173548066 -26082084 + L2 LINE L2 3203 3305 -8 336 293 120 65 chr5 173549459 173549640 -26080510 + MLT1H LTR MaLR 110 280 -269 2715 42 0 0 chr5 173549640 173549950 -26080200 + AluY SINE Alu 1 310 -1 336 293 120 65 chr5 173549950 173550185 -26079965 + MLT1H LTR MaLR 280 549 0 245 329 0 13 chr5 173550185 173550261 -26079889 - L2 LINE L2 -31 3282 3208 351 274 104 0 chr5 173550280 173550415 -26079735 - MIR SINE MIR -67 195 47 433 269 58 13 chr5 173550416 173550572 -26079578 + MIR SINE MIR 82 244 -18 512 262 0 8 chr5 173550906 173551028 -26079122 - MER45A DNA AcHobo -1 177 57 307 283 22 0 chr5 173551034 173551126 -26079024 + MIR SINE MIR 153 246 -16 212 222 178 22 chr5 173551654 173551744 -26078406 + MIR SINE MIR 5 108 -154 973 222 11 0 chr5 173551745 173551934 -26078216 - MER20 DNA MER1_type 0 219 29 313 251 35 58 chr5 173551970 173552141 -26078009 + MIR SINE MIR 96 262 0 2179 136 0 3 chr5 173552218 173552519 -26077631 + AluSx SINE Alu 1 300 -12 190 225 36 145 chr5 173552519 173552651 -26077499 - L2 LINE L2 -6 3266 3150 304 289 29 10 chr5 173552652 173552756 -26077394 + MIR SINE MIR 48 153 -109 460 266 38 13 chr5 173552971 173553129 -26077021 + MIR SINE MIR 84 245 -17 769 192 34 45 chr5 173555298 173555475 -26074675 - MER20 DNA MER1_type 0 219 45 250 200 0 0 chr5 173555476 173555516 -26074634 - MER20 DNA MER1_type -150 69 30 24 32 0 0 chr5 173556607 173556638 -26073512 + AT_rich Low_complexity Low_complexity 1 31 0 1849 128 148 63 chr5 173556730 173557129 -26073021 - Tigger2a DNA MER2_type 0 434 2 22 0 0 0 chr5 173558853 173558875 -26071275 + AT_rich Low_complexity Low_complexity 1 22 0 196 375 0 0 chr5 173559149 173559237 -26070913 - MIR3 SINE MIR 0 208 121 408 291 107 21 chr5 173559283 173559519 -26070631 + Charlie8 DNA MER1_type 73 1417 -1000 2120 163 34 60 chr5 173559519 173559956 -26070194 - MSTB LTR MaLR 0 426 1 25 0 0 0 chr5 173561279 173561304 -26068846 + AT_rich Low_complexity Low_complexity 1 25 0 2083 200 45 53 chr5 173562836 173562953 -26067197 + MLT1D LTR MaLR 1 117 -388 2982 126 9 6 chr5 173562953 173563420 -26066730 + L1PA16 LINE L1 5693 6160 -6 2083 200 45 53 chr5 173563420 173563811 -26066339 + MLT1D LTR MaLR 117 505 0 876 290 93 36 chr5 173564413 173564941 -26065209 + HAL1b LINE L1 57 614 -734 2578 56 13 0 chr5 173565229 173565531 -26064619 + AluY SINE Alu 6 311 0 2064 224 80 80 chr5 173565635 173566587 -26063563 + L1MC5 LINE L1 6563 7531 -430 2484 87 0 0 chr5 173568115 173568424 -26061726 + AluSc SINE Alu 1 309 0 32507 31 1 0 chr5 173568919 173573522 -26056628 - L1PA3 LINE L1 0 6806 2193 341 322 52 33 chr5 173573639 173573850 -26056300 + L1ME3A LINE L1 5926 6140 -30 2210 109 3 0 chr5 173574020 173574304 -26055846 + AluSc SINE Alu 1 285 -24 2010 142 3 0 chr5 173575332 173575620 -26054530 - AluSx SINE Alu -23 289 1 494 302 57 24 chr5 173576176 173576388 -26053762 - MIR SINE MIR -39 223 5 519 268 89 6 chr5 173576395 173576552 -26053598 - MIR3 SINE MIR -5 203 34 1052 252 128 34 chr5 173576594 173577031 -26053119 - LTR33 LTR ERVL -29 492 15 201 74 0 0 chr5 173577593 173577620 -26052530 + (CA)n Simple_repeat Simple_repeat 1 27 0 189 171 0 0 chr5 173578075 173578110 -26052040 + T-rich Low_complexity Low_complexity 1 35 0 449 239 17 94 chr5 173578782 173578962 -26051188 - MIR SINE MIR -30 232 67 511 233 56 0 chr5 173579156 173579302 -26050848 - MER58C DNA MER1_type 0 215 60 486 273 50 58 chr5 173579730 173579972 -26050178 - MIR SINE MIR -7 255 16 236 296 15 59 chr5 173580750 173580885 -26049265 + C-rich Low_complexity Low_complexity 5 133 0 2557 52 3 10 chr5 173581841 173582150 -26048000 - AluY SINE Alu -4 307 1 580 171 9 9 chr5 173582279 173582384 -26047766 - MLT1B LTR MaLR -285 105 1 461 259 29 75 chr5 173582384 173582558 -26047592 + MER117 DNA MER1_type 5 170 -27 431 227 13 84 chr5 173582687 173582841 -26047309 - MIR3 SINE MIR -27 181 39 371 296 14 56 chr5 173583022 173583164 -26046986 + MER117 DNA MER1_type 55 190 -7 210 298 0 0 chr5 173583164 173583211 -26046939 + L3 LINE CR1 1525 1571 -6 657 279 34 6 chr5 173583930 173584109 -26046041 + MIR SINE MIR 15 198 -64 282 272 158 18 chr5 173584488 173584602 -26045548 + MIR SINE MIR 20 149 -59 365 270 203 0 chr5 173584718 173584866 -26045284 - MIR SINE MIR -21 241 64 210 143 0 0 chr5 173585798 173585833 -26044317 + (TTC)n Simple_repeat Simple_repeat 3 37 0 403 291 24 6 chr5 173585850 173586015 -26044135 - MIR SINE MIR -11 251 84 2052 119 7 3 chr5 173586902 173587197 -26042953 + AluSx SINE Alu 1 296 -16 356 318 47 0 chr5 173587244 173587351 -26042799 - MER91C DNA MER1_type 0 140 29 206 297 23 91 chr5 173587370 173587545 -26042605 + L2 LINE L2 3001 3163 -109 538 262 33 0 chr5 173587689 173587811 -26042339 + L2 LINE L2 3147 3272 0 401 286 57 26 chr5 173588233 173588437 -26041713 - MIR SINE MIR -42 220 16 241 402 27 27 chr5 173588905 173589089 -26041061 + L3b LINE CR1 1212 1395 -188 2093 121 3 3 chr5 173589412 173589701 -26040449 + AluJo SINE Alu 1 289 -23 322 271 82 115 chr5 173591002 173591143 -26039007 + MIR SINE MIR 8 139 -123 2373 147 0 3 chr5 173591143 173591503 -26038647 + L1PB1 LINE L1 5793 6151 0 322 271 82 115 chr5 173591503 173591605 -26038545 + MIR SINE MIR 139 243 -19 941 215 61 67 chr5 173592807 173593183 -26036967 + MER96B DNA MER1_type? 1 374 -43 264 30 0 0 chr5 173593238 173593271 -26036879 + (A)n Simple_repeat Simple_repeat 1 33 0 1577 183 16 29 chr5 173594711 173595049 -26035101 + AluJo SINE Alu 1 312 0 704 268 34 21 chr5 173595742 173595977 -26034173 + MIR SINE MIR 24 261 -1 419 245 27 61 chr5 173595984 173596131 -26034019 - MIR SINE MIR -106 156 15 23 0 0 0 chr5 173596525 173596548 -26033602 + AT_rich Low_complexity Low_complexity 1 23 0 423 260 87 43 chr5 173597063 173597271 -26032879 + MER112 DNA MER1_type 1 217 -43 190 326 34 22 chr5 173597273 173597362 -26032788 + MER5A DNA MER1_type 85 174 -15 1949 173 73 34 chr5 173597474 173597856 -26032294 + MLT2C1 LTR ERVL 1 397 0 196 336 207 43 chr5 173597901 173598341 -26031809 - L2 LINE L2 -613 2701 2190 605 245 137 72 chr5 173598410 173598659 -26031491 - MLT1K LTR MaLR -71 517 253 616 245 58 136 chr5 173598672 173599048 -26031102 + L2 LINE L2 2967 3313 0 335 227 93 31 chr5 173599053 173599150 -26031000 - MER63 DNA MER1_type -330 732 4 832 160 48 0 chr5 173599235 173599360 -26030790 + FLAM_C SINE Alu 1 131 -2 238 343 61 28 chr5 173599435 173599648 -26030502 - L2 LINE L2 -1148 2166 1947 399 313 41 14 chr5 173600145 173600292 -26029858 + MIR3 SINE MIR 45 195 -13 201 258 15 8 chr5 173601066 173601198 -26028952 + (TATG)n Simple_repeat Simple_repeat 4 136 0 341 340 85 15 chr5 173601305 173601505 -26028645 + MIR SINE MIR 49 262 0 467 235 0 0 chr5 173601883 173601985 -26028165 + MER117 DNA MER1_type 47 148 -49 342 326 33 54 chr5 173602323 173602443 -26027707 + MIR SINE MIR 20 134 -128 414 0 0 0 chr5 173602443 173602489 -26027661 + (TG)n Simple_repeat Simple_repeat 2 47 0 342 326 33 54 chr5 173602489 173602610 -26027540 + MIR SINE MIR 134 256 -6 426 238 16 48 chr5 173603155 173603281 -26026869 - MIR SINE MIR 0 262 141 1793 118 7 32 chr5 173604649 173604928 -26025222 + AluSq SINE Alu 1 272 -41 333 68 0 0 chr5 173604928 173604972 -26025178 + (GGGA)n Simple_repeat Simple_repeat 1 44 0 438 266 70 0 chr5 173605201 173605329 -26024821 + MLT1L LTR MaLR 475 611 -4 204 208 42 0 chr5 173605461 173605509 -26024641 + L2 LINE L2 3137 3186 -86 492 279 78 17 chr5 173605563 173605742 -26024408 + MIR SINE MIR 48 237 -25 366 259 133 51 chr5 173606467 173606842 -26023308 + LTR16A1 LTR ERVL 52 457 0 772 304 92 28 chr5 173606848 173607239 -26022911 - L2 LINE L2 -52 3261 2846 420 202 30 40 chr5 173607260 173607359 -26022791 - L2 LINE L2 -621 2693 2596 2013 243 142 32 chr5 173607491 173607646 -26022504 - L2 LINE L2 -674 2640 2503 230 0 0 32 chr5 173607646 173607677 -26022473 + (GGAA)n Simple_repeat Simple_repeat 1 30 0 2013 243 142 32 chr5 173607677 173608266 -26021884 - L2 LINE L2 -811 2503 1814 380 301 60 8 chr5 173608266 173608399 -26021751 + MER117 DNA MER1_type 34 173 -24 335 301 6 109 chr5 173609173 173609329 -26020821 - L3 LINE CR1 -8 1569 1430 207 0 0 0 chr5 173610758 173610781 -26019369 + (A)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr5 173610829 173610852 -26019298 + (A)n Simple_repeat Simple_repeat 1 23 0 1642 216 106 45 chr5 173611422 173611978 -26018172 + L1MC5 LINE L1 6942 7531 -430 307 304 55 55 chr5 173612069 173612270 -26017880 + L1ME3A LINE L1 5965 6165 -5 258 286 65 0 chr5 173613641 173613718 -26016432 - MIR3 SINE MIR -41 167 86 851 291 159 48 chr5 173613735 173614257 -26015893 + MLT1L LTR MaLR 34 613 -2 339 172 0 16 chr5 173614260 173614324 -26015826 - MIR SINE MIR -119 89 27 1232 264 68 9 chr5 173614367 173614689 -26015461 - MLT1I LTR MaLR -3 406 66 696 273 51 65 chr5 173615049 173615466 -26014684 - L1MC4a LINE L1 -161 5960 5549 2012 154 0 3 chr5 173616237 173616548 -26013602 + AluJb SINE Alu 1 310 -2 667 233 56 6 chr5 173616666 173616846 -26013304 - MER117 DNA MER1_type -8 189 1 705 280 108 51 chr5 173617145 173617598 -26012552 - L2 LINE L2 -5 3308 2830 354 268 92 39 chr5 173617820 173617973 -26012177 - L2 LINE L2 -199 3073 2913 209 222 16 0 chr5 173619657 173619720 -26010430 + (TA)n Simple_repeat Simple_repeat 2 65 0 275 315 11 11 chr5 173619798 173619887 -26010263 + MIR SINE MIR 85 173 -89 297 292 0 0 chr5 173620009 173620081 -26010069 + L2 LINE L2 3201 3272 0 207 167 0 0 chr5 173620949 173620991 -26009159 + CT-rich Low_complexity Low_complexity 1 42 0 493 359 110 17 chr5 173621011 173621421 -26008729 + L2 LINE L2 2817 3264 -8 555 318 79 26 chr5 173621709 173621780 -26008370 - MLT1K LTR MaLR -165 423 357 2270 116 0 3 chr5 173621780 173622091 -26008059 + AluSq SINE Alu 1 310 -3 555 318 79 26 chr5 173622091 173622286 -26007864 - MLT1K LTR MaLR -231 357 143 434 335 72 47 chr5 173622950 173623186 -26006964 - MIR SINE MIR -20 242 1 1260 184 9 9 chr5 173623536 173623754 -26006396 + MER20 DNA MER1_type 2 219 0 1893 135 33 23 chr5 173623952 173624255 -26005895 - AluSx SINE Alu -6 306 1 410 304 34 14 chr5 173624271 173624419 -26005731 + MIR SINE MIR 1 151 -111 849 249 70 8 chr5 173625008 173625265 -26004885 + L1ME LINE L1 5545 5817 -304 25 51 0 0 chr5 173625619 173625658 -26004492 + AT_rich Low_complexity Low_complexity 1 39 0 1773 125 108 46 chr5 173626332 173626479 -26003671 + THE1C LTR MaLR 1 137 -238 2100 80 29 4 chr5 173626479 173626786 -26003364 - AluSg SINE Alu 0 314 1 1773 125 108 46 chr5 173626786 173626988 -26003162 + THE1C LTR MaLR 137 373 -2 223 235 0 0 chr5 173627814 173627865 -26002285 + (TG)n Simple_repeat Simple_repeat 2 52 0 21 0 0 0 chr5 173629578 173629599 -26000551 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 173629697 173629721 -26000429 + (A)n Simple_repeat Simple_repeat 1 24 0 325 326 0 0 chr5 173631139 173631237 -25998913 - MIR SINE MIR -49 213 116 380 284 181 56 chr5 173631925 173632140 -25998010 - MIR SINE MIR -18 244 3 202 288 173 3 chr5 173632709 173632852 -25997298 + MIR SINE MIR 22 227 -35 1032 156 69 0 chr5 173632862 173633035 -25997115 - MER5A DNA MER1_type -4 185 1 352 262 90 0 chr5 173633038 173633160 -25996990 + MER94 DNA DNA 1 133 -1 222 118 0 0 chr5 173634125 173634159 -25995991 + (A)n Simple_repeat Simple_repeat 1 34 0 2012 114 0 35 chr5 173634889 173635202 -25994948 + AluSc SINE Alu 1 303 0 410 293 53 8 chr5 173635779 173635912 -25994238 + MIR3 SINE MIR 16 154 -54 787 290 24 10 chr5 173635929 173636136 -25994014 + MIR SINE MIR 45 254 -8 217 360 44 7 chr5 173636467 173636603 -25993547 + MIR SINE MIR 52 192 -70 392 248 0 40 chr5 173636624 173636725 -25993425 - MIR SINE MIR -8 254 158 730 260 140 23 chr5 173636726 173637076 -25993074 + L2 LINE L2 2408 2798 -516 886 209 122 88 chr5 173637089 173637500 -25992650 - Zaphod DNA AcHobo -11 4020 3596 3345 207 71 29 chr5 173637501 173638400 -25991750 - Zaphod DNA AcHobo -3043 988 52 655 318 58 21 chr5 173638427 173638768 -25991382 + L2 LINE L2 2793 3149 -164 1652 189 0 17 chr5 173638856 173639158 -25990992 + AluJo SINE Alu 1 297 -15 28 61 0 0 chr5 173639208 173639257 -25990893 + AT_rich Low_complexity Low_complexity 1 49 0 680 271 54 29 chr5 173639759 173639999 -25990151 - MIR SINE MIR -8 254 9 208 277 117 11 chr5 173640024 173640118 -25990032 - L2 LINE L2 0 3272 3169 180 240 20 20 chr5 173640351 173640401 -25989749 - L2 LINE L2 -16 3297 3248 395 331 47 0 chr5 173640700 173640848 -25989302 + MIR SINE MIR 52 206 -56 1111 149 56 33 chr5 173641709 173641923 -25988227 - THE1C LTR MaLR 0 375 157 259 294 40 16 chr5 173642096 173642222 -25987928 + L1MC5 LINE L1 7782 7910 -51 24 32 0 0 chr5 173642256 173642287 -25987863 + AT_rich Low_complexity Low_complexity 1 31 0 264 263 106 28 chr5 173642706 173642885 -25987265 + L2 LINE L2 2691 2883 -431 411 242 78 8 chr5 173642891 173643019 -25987131 + L1ME4a LINE L1 5979 6115 -6 273 375 48 30 chr5 173643882 173644050 -25986100 - MIR3 SINE MIR -18 190 20 1393 217 0 4 chr5 173645421 173645661 -25984489 + MER8 DNA MER2_type 1 239 0 243 343 243 0 chr5 173645739 173645949 -25984201 + MIR SINE MIR 2 262 0 2188 135 0 0 chr5 173646097 173646393 -25983757 + AluSx SINE Alu 6 301 -11 332 279 110 32 chr5 173646535 173646689 -25983461 + MIR3 SINE MIR 16 181 -27 479 164 207 0 chr5 173647381 173647497 -25982653 + L1ME4a LINE L1 5982 6121 0 198 280 149 28 chr5 173647674 173647781 -25982369 + MIR3 SINE MIR 3 122 -86 620 292 29 19 chr5 173647792 173648001 -25982149 + MIR SINE MIR 33 243 -19 278 290 172 11 chr5 173648832 173649018 -25981132 + MIR SINE MIR 1 216 -46 472 208 63 145 chr5 173649284 173649383 -25980767 - MIR SINE MIR -15 247 174 2084 76 3 69 chr5 173649383 173649686 -25980464 + AluSp SINE Alu 1 283 -30 472 208 63 145 chr5 173649686 173649807 -25980343 - MIR SINE MIR -88 174 45 281 307 51 15 chr5 173650054 173650191 -25979959 - MIR3 SINE MIR -31 177 36 270 313 76 73 chr5 173650609 173650636 -25979514 - L2 LINE L2 0 3313 3288 2340 102 3 0 chr5 173650636 173650941 -25979209 + AluSq SINE Alu 1 306 -7 270 313 76 73 chr5 173650941 173651229 -25978921 - L2 LINE L2 -25 3288 2997 298 220 66 0 chr5 173651325 173651416 -25978734 - L1ME4a LINE L1 -5 6116 6020 227 133 22 0 chr5 173651475 173651520 -25978630 + (TA)n Simple_repeat Simple_repeat 1 46 0 2056 121 4 0 chr5 173651771 173652052 -25978098 + AluSx SINE Alu 1 282 -30 182 62 31 0 chr5 173652055 173652087 -25978063 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 339 281 103 4 chr5 173652107 173652388 -25977762 - L1ME4a LINE L1 -148 5973 5665 22 0 0 0 chr5 173652490 173652512 -25977638 + AT_rich Low_complexity Low_complexity 1 22 0 626 201 0 92 chr5 173653020 173653080 -25977070 + MIR SINE MIR 90 154 -108 2446 144 0 0 chr5 173653080 173653442 -25976708 + L1PA14 LINE L1 5791 6152 -9 626 201 0 92 chr5 173653442 173653565 -25976585 + MIR SINE MIR 154 256 -6 260 369 59 31 chr5 173654219 173654441 -25975709 - L2 LINE L2 -636 2678 2451 480 297 33 42 chr5 173654746 173654958 -25975192 + L2 LINE L2 3033 3242 -30 30 27 0 0 chr5 173655318 173655355 -25974795 + AT_rich Low_complexity Low_complexity 1 37 0 183 328 30 60 chr5 173655464 173655598 -25974552 - MIR3 SINE MIR -46 162 33 436 310 19 13 chr5 173655606 173655783 -25974367 + MER5A DNA MER1_type 1 189 0 324 48 0 0 chr5 173656909 173656951 -25973199 + (CA)n Simple_repeat Simple_repeat 1 42 0 214 268 62 80 chr5 173657459 173657571 -25972579 - L2 LINE L2 -4 3268 3159 866 264 67 10 chr5 173657651 173657950 -25972200 + LTR16A LTR ERVL 134 449 -1 898 269 65 28 chr5 173658836 173659301 -25970849 + L1M4 LINE L1 3953 4434 -1712 382 311 126 26 chr5 173659880 173660070 -25970080 - MIR SINE MIR -37 225 17 365 345 7 14 chr5 173660146 173660288 -25969862 - MIR SINE MIR -109 153 13 423 269 135 7 chr5 173660959 173661100 -25969050 - MIR SINE MIR -101 161 3 3119 257 87 58 chr5 173661491 173662417 -25967733 - L2 LINE L2 -137 3176 2278 1762 161 3 20 chr5 173662417 173662741 -25967409 + AluJb SINE Alu 1 319 0 3119 257 87 58 chr5 173662741 173662980 -25967170 - L2 LINE L2 -1035 2278 2047 182 37 37 0 chr5 173662980 173663007 -25967143 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1548 159 35 21 chr5 173663010 173663293 -25966857 + AluJb SINE Alu 1 287 -25 3119 257 87 58 chr5 173663293 173663519 -25966631 - L2 LINE L2 -1267 2046 1441 464 346 161 17 chr5 173663683 173664088 -25966062 - L2 LINE L2 -640 2674 2212 1433 229 75 28 chr5 173664535 173664972 -25965178 - MER113 DNA MER1_type? -34 487 30 1060 223 110 28 chr5 173664989 173665353 -25964797 - LTR37A LTR ERV1 -17 409 16 283 273 34 0 chr5 173665427 173665515 -25964635 + MIR3 SINE MIR 110 200 -8 261 234 181 84 chr5 173666221 173666351 -25963799 + MIR SINE MIR 22 138 -124 2243 84 7 0 chr5 173666351 173666635 -25963515 + AluSg SINE Alu 1 286 -24 207 0 0 0 chr5 173666644 173666667 -25963483 + (TAA)n Simple_repeat Simple_repeat 1 23 0 261 234 181 84 chr5 173666667 173666754 -25963396 + MIR SINE MIR 145 262 0 1983 120 0 37 chr5 173666900 173667199 -25962951 + AluSx SINE Alu 1 288 -24 1916 148 21 3 chr5 173667408 173667699 -25962451 + AluJb SINE Alu 1 296 -16 3980 71 4 8 chr5 173668203 173668699 -25961451 + L1PA10 LINE L1 5660 6153 -15 340 209 191 130 chr5 173668870 173669147 -25961003 - L2 LINE L2 0 3313 3020 355 252 76 28 chr5 173669404 173669577 -25960573 - MLT1K LTR MaLR -5 609 421 5111 154 33 14 chr5 173669959 173671217 -25958933 + L1MA9 LINE L1 4887 6163 -149 317 279 12 0 chr5 173671221 173671307 -25958843 + GA-rich Low_complexity Low_complexity 2 88 0 668 200 0 0 chr5 173671308 173671433 -25958717 + L1MA10 LINE L1 6170 6294 -40 198 150 0 0 chr5 173671593 173671633 -25958517 + (CA)n Simple_repeat Simple_repeat 2 41 0 193 370 103 0 chr5 173671847 173671993 -25958157 + MIR SINE MIR 17 177 -85 279 218 0 0 chr5 173672215 173672270 -25957880 - MER117 DNA MER1_type -123 74 20 727 253 56 6 chr5 173672351 173672529 -25957621 + MER58A DNA MER1_type 36 222 -2 409 331 28 28 chr5 173672967 173673148 -25957002 + MER5A DNA MER1_type 9 189 0 317 348 32 24 chr5 173674103 173674350 -25955800 + L1MC4a LINE L1 4909 5157 -989 1329 276 156 23 chr5 173674448 173675243 -25954907 + L1MC4a LINE L1 5264 6164 -1644 1493 160 35 31 chr5 173676083 173676371 -25953779 - AluJb SINE Alu -7 305 17 2864 173 27 6 chr5 173678384 173678905 -25951245 + L1MA5 LINE L1 5769 6300 0 228 260 16 81 chr5 173679350 173679473 -25950677 - MIR SINE MIR -50 212 98 242 191 21 0 chr5 173679685 173679732 -25950418 + L2 LINE L2 3266 3313 0 324 379 30 0 chr5 173679732 173679864 -25950286 + L2 LINE L2 3137 3272 0 190 347 24 57 chr5 173681706 173681830 -25948320 - L2 LINE L2 -42 3230 3111 2334 108 0 0 chr5 173681873 173682180 -25947970 + AluSq SINE Alu 1 307 -6 636 237 46 12 chr5 173682272 173682445 -25947705 - MIR SINE MIR -15 247 69 618 309 83 18 chr5 173682652 173682869 -25947281 + MIR SINE MIR 12 242 -20 339 238 40 0 chr5 173682910 173683011 -25947139 + MIR SINE MIR 149 253 -9 202 333 44 0 chr5 173683464 173683554 -25946596 + MIR SINE MIR 120 213 -49 237 259 196 0 chr5 173683576 173683688 -25946462 - MIR SINE MIR 0 262 129 4250 99 46 14 chr5 173683831 173684456 -25945694 - L1MA2 LINE L1 0 6304 5660 994 296 102 45 chr5 173684812 173685343 -25944807 + MLT1K LTR MaLR 10 570 -18 775 266 106 27 chr5 173685966 173686267 -25943883 + MER102a DNA MER1_type 5 329 -1 225 0 0 0 chr5 173686881 173686906 -25943244 + (A)n Simple_repeat Simple_repeat 1 25 0 646 261 166 14 chr5 173687300 173687511 -25942639 + MIR SINE MIR 18 260 -2 2364 108 0 0 chr5 173687903 173688200 -25941950 + AluSg SINE Alu 1 297 -13 944 205 142 63 chr5 173688518 173688898 -25941252 - LTR29 LTR ERV1 -73 549 140 369 171 400 0 chr5 173688876 173688981 -25941169 - MER39 LTR ERV1 -560 147 1 * 1807 115 3 72 chr5 173689082 173689271 -25940879 - MER39-int LTR ERV1 -164 6167 6005 2590 141 47 5 chr5 173689271 173689676 -25940474 + MSTB LTR MaLR 4 425 -1 1807 115 3 72 chr5 173689676 173689790 -25940360 - MER39-int LTR ERV1 -326 6005 5885 651 153 88 29 chr5 173689791 173689928 -25940222 + LTR23 LTR ERV1 7 151 -286 1681 127 11 32 chr5 173690001 173690284 -25939866 + LTR23 LTR ERV1 161 437 0 966 97 0 58 chr5 173690285 173690439 -25939711 - MER39-int LTR ERV1 -444 5887 5743 604 236 115 28 chr5 173692069 173692311 -25937839 - MIR SINE MIR -1 261 3 400 211 98 68 chr5 173692409 173692542 -25937608 - L2 LINE L2 -16 3297 3161 1269 280 48 34 chr5 173692623 173693169 -25936981 + L1ME LINE L1 5266 5823 -347 363 279 19 19 chr5 173693912 173694016 -25936134 - MER81 DNA DNA 0 114 11 390 230 46 0 chr5 173694031 173694182 -25935968 - MER53 DNA DNA 0 189 4 490 272 178 6 chr5 173694235 173694415 -25935735 - MIR SINE MIR -3 259 49 396 306 19 0 chr5 173694820 173694928 -25935222 + MER81 DNA DNA 5 114 0 374 206 117 31 chr5 173694952 173695108 -25935042 - MIR SINE MIR -54 208 42 468 284 142 25 chr5 173695137 173695334 -25934816 + MIR SINE MIR 28 247 -15 866 210 6 13 chr5 173695489 173695646 -25934504 - AluJb SINE Alu -20 292 137 192 308 0 121 chr5 173696199 173696290 -25933860 + MIR SINE MIR 17 96 -112 357 291 116 25 chr5 173696308 173696507 -25933643 - MIR SINE MIR -10 252 38 640 274 62 49 chr5 173697787 173698094 -25932056 - LTR16A1 LTR ERVL 0 457 147 383 348 19 7 chr5 173698558 173698713 -25931437 - L2 LINE L2 -56 3257 3101 1271 159 62 26 chr5 173698713 173698939 -25931211 + AluJo SINE Alu 1 234 -78 343 239 120 21 chr5 173698951 173699093 -25931057 - L2 LINE L2 -189 3124 2969 267 357 53 23 chr5 173699086 173699257 -25930893 - L2 LINE L2 -583 2731 2556 * 1707 197 33 0 chr5 173699538 173699868 -25930282 - MER58B DNA MER1_type 0 341 1 477 243 79 14 chr5 173700794 173700934 -25929216 - MIR SINE MIR -74 188 40 1297 149 28 104 chr5 173702930 173703050 -25927100 + MER1B DNA MER1_type 1 129 -2583 1953 156 10 0 chr5 173703050 173703351 -25926799 - AluSx SINE Alu -8 304 1 1297 149 28 104 chr5 173703351 173703519 -25926631 + MER1B DNA MER1_type 129 267 -72 1226 289 89 42 chr5 173703658 173703884 -25926266 + MLT1L LTR MaLR 19 233 -382 2395 98 0 7 chr5 173703884 173704191 -25925959 - AluSx SINE Alu -7 305 1 1226 289 89 42 chr5 173704191 173704534 -25925616 + MLT1L LTR MaLR 233 615 0 225 287 148 20 chr5 173705003 173705104 -25925046 - L2 LINE L2 -6 3266 3153 866 249 114 42 chr5 173706208 173706586 -25923564 - MLT1J2 LTR MaLR -2 448 44 325 240 0 107 chr5 173707687 173707731 -25922419 - MIR SINE MIR -13 249 202 2192 112 0 3 chr5 173707731 173708025 -25922125 - AluSx SINE Alu -19 293 1 325 240 0 107 chr5 173708025 173708130 -25922020 - MIR SINE MIR -60 202 116 487 304 30 59 chr5 173708162 173708399 -25921751 - MIR SINE MIR -30 232 3 2168 116 7 7 chr5 173708720 173709021 -25921129 + AluSx SINE Alu 3 303 -9 686 323 25 16 chr5 173710659 173710981 -25919169 + L2 LINE L2 2986 3310 -3 252 86 0 0 chr5 173711913 173711948 -25918202 + (A)n Simple_repeat Simple_repeat 1 35 0 268 238 16 66 chr5 173711981 173712103 -25918047 + CT-rich Low_complexity Low_complexity 4 119 0 502 194 10 10 chr5 173712764 173712862 -25917288 + MER69 DNA AcHobo 2429 2526 0 386 239 58 29 chr5 173713093 173713231 -25916919 - L1ME3 LINE L1 -1 6161 6020 551 299 34 34 chr5 173714343 173714550 -25915600 + MIR SINE MIR 11 217 -45 1664 169 3 29 chr5 173714981 173715288 -25914862 - AluJo SINE Alu 0 312 14 670 308 67 39 chr5 173716309 173716696 -25913454 + L2 LINE L2 2916 3313 0 380 313 21 7 chr5 173717509 173717653 -25912497 + MIR SINE MIR 117 262 0 551 14 0 14 chr5 173718757 173718826 -25911324 + (TTTTA)n Simple_repeat Simple_repeat 1 68 0 2436 81 0 10 chr5 173719104 173719412 -25910738 + AluSg SINE Alu 1 305 -5 347 244 70 0 chr5 173719628 173719714 -25910436 - Zaphod DNA AcHobo -24 4007 3916 1082 296 141 26 chr5 173719725 173720215 -25909935 - MER115 DNA AcHobo -144 549 4 213 216 68 54 chr5 173720403 173720477 -25909673 + L2 LINE L2 3239 3313 0 2378 70 3 0 chr5 173720714 173721013 -25909137 - AluY SINE Alu -11 300 1 880 215 113 11 chr5 173721034 173721220 -25908930 - MER20 DNA MER1_type 0 219 15 23 33 0 0 chr5 173722186 173722216 -25907934 + AT_rich Low_complexity Low_complexity 1 30 0 2014 138 0 0 chr5 173722285 173722611 -25907539 + AluSx SINE Alu 1 326 0 23 0 0 0 chr5 173722640 173722663 -25907487 + AT_rich Low_complexity Low_complexity 1 23 0 253 345 97 0 chr5 173722862 173722975 -25907175 - L2 LINE L2 0 3272 3149 198 329 86 53 chr5 173724328 173724480 -25905670 + MIR SINE MIR 64 220 -42 901 226 32 40 chr5 173724596 173724848 -25905302 - MER113 DNA MER1_type? -73 448 199 1879 147 13 16 chr5 173724862 173725174 -25904976 - AluJb SINE Alu -1 311 1 688 248 25 0 chr5 173725179 173725381 -25904769 - MER113 DNA MER1_type? -307 214 8 356 88 18 0 chr5 173725869 173725926 -25904224 + (TC)n Simple_repeat Simple_repeat 1 58 0 7385 64 3 7 chr5 173727080 173728834 -25901316 - L1PA7 LINE L1 0 6154 4293 484 261 84 0 chr5 173728863 173729005 -25901145 - MIR SINE MIR -69 193 40 345 109 0 0 chr5 173729557 173729612 -25900538 + (CA)n Simple_repeat Simple_repeat 2 56 0 182 319 117 0 chr5 173730014 173730108 -25900042 - MIR SINE MIR -26 236 132 869 171 26 87 chr5 173730148 173730412 -25899738 + Charlie5 DNA MER1_type 2372 2619 0 588 168 0 80 chr5 173730427 173730540 -25899610 + MER58B DNA MER1_type 1 104 -237 215 221 44 59 chr5 173730635 173730703 -25899447 - MIR SINE MIR -186 76 10 183 315 19 0 chr5 173730717 173730771 -25899379 - MIR SINE MIR -27 235 181 279 316 0 2 chr5 173730937 173731012 -25899138 - MIR SINE MIR -95 113 40 836 207 7 0 chr5 173731389 173731539 -25898611 + MER58B DNA MER1_type 190 340 -1 711 240 63 39 chr5 173732191 173732445 -25897705 - MIR SINE MIR -1 261 2 296 294 24 12 chr5 173732548 173732633 -25897517 - L2 LINE L2 0 3272 3187 421 292 86 130 chr5 173733987 173734225 -25895925 + L2 LINE L2 2731 2931 -341 2705 211 28 9 chr5 173734225 173734799 -25895351 - L1MB8 LINE L1 -13 6165 5581 421 292 86 130 chr5 173734799 173735023 -25895127 + L2 LINE L2 2931 3163 -109 332 230 27 0 chr5 173735073 173735147 -25895003 + MLT1F1 LTR MaLR 1 76 -466 489 17 0 0 chr5 173735206 173735264 -25894886 + (TC)n Simple_repeat Simple_repeat 1 58 0 1402 209 31 7 chr5 173735264 173735577 -25894573 + MLT1F1 LTR MaLR 193 559 -8 1418 231 16 54 chr5 173735716 173736102 -25894048 + MLT1A2 LTR MaLR 4 374 0 226 289 36 0 chr5 173736118 173736201 -25893949 - MIR SINE MIR -70 192 107 29 0 0 0 chr5 173736398 173736427 -25893723 + AT_rich Low_complexity Low_complexity 1 29 0 705 117 33 17 chr5 173736427 173736547 -25893603 - L1MB5 LINE L1 0 6174 6053 202 312 28 106 chr5 173736858 173736905 -25893245 + MIR SINE MIR 17 66 -142 1208 226 9 0 chr5 173736905 173737126 -25893024 + MER58A DNA MER1_type 2 224 0 202 312 28 106 chr5 173737126 173737219 -25892931 + MIR SINE MIR 66 146 -62 471 216 52 45 chr5 173737577 173737711 -25892439 + MIR SINE MIR 54 188 -74 249 307 47 20 chr5 173738242 173738392 -25891758 + MIR SINE MIR 28 181 -81 198 254 17 17 chr5 173738396 173738455 -25891695 + L2 LINE L2 3210 3268 -4 287 223 0 17 chr5 173739113 173739211 -25890939 + MLT1J2 LTR MaLR 315 409 0 232 209 0 0 chr5 173739345 173739388 -25890762 - MIR SINE MIR -189 73 31 852 100 0 79 chr5 173739399 173739539 -25890611 - AluSp/q SINE Alu -19 294 166 298 296 0 12 chr5 173739569 173739650 -25890500 - MIR SINE MIR -149 113 34 415 310 75 6 chr5 173740178 173740352 -25889798 - MIR SINE MIR 0 262 77 300 329 60 52 chr5 173740717 173740917 -25889233 + MIR SINE MIR 5 203 -59 473 350 42 13 chr5 173741960 173742197 -25887953 - MIR SINE MIR -6 256 13 363 296 167 41 chr5 173742213 173742890 -25887260 - L2 LINE L2 -2 3311 2535 2329 94 0 0 chr5 173742890 173743176 -25886974 + AluSq SINE Alu 21 306 -7 363 296 167 41 chr5 173743176 173743206 -25886944 - L2 LINE L2 -778 2535 2510 315 183 0 70 chr5 173744427 173744498 -25885652 - MLT1J2 LTR MaLR -23 427 362 410 295 94 7 chr5 173744553 173744702 -25885448 - MLT1J2 LTR MaLR -257 193 32 233 250 17 0 chr5 173744814 173744874 -25885276 + MLT1K LTR MaLR 510 570 -18 218 286 27 18 chr5 173745811 173745923 -25884227 + (TAAA)n Simple_repeat Simple_repeat 2 114 0 498 261 17 8 chr5 173746153 173746272 -25883878 + L2 LINE L2 3193 3312 -1 594 231 58 19 chr5 173746383 173746539 -25883611 + MER117 DNA MER1_type 5 166 -31 1366 240 9 112 chr5 173746955 173747320 -25882830 + MLT1I LTR MaLR 2 403 -6 864 29 0 0 chr5 173747320 173747423 -25882727 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 2242 80 0 0 chr5 173747428 173747702 -25882448 - AluY SINE Alu -37 274 1 1366 240 9 112 chr5 173747702 173747785 -25882365 + MLT1I LTR MaLR 319 409 0 1955 157 43 27 chr5 173748594 173748963 -25881187 + THE1C LTR MaLR 1 375 0 960 209 0 0 chr5 173749067 173749230 -25880920 - MER45A DNA AcHobo -15 163 1 649 232 128 0 chr5 173750242 173750406 -25879744 - MER63A DNA MER1_type 0 210 26 2387 70 0 3 chr5 173750575 173750874 -25879276 + AluY SINE Alu 1 298 -13 206 372 11 11 chr5 173750951 173751045 -25879105 - L2 LINE L2 -42 3230 3137 262 297 0 27 chr5 173751216 173751290 -25878860 + MARNA DNA Mariner 75 146 -440 525 311 14 23 chr5 173751313 173751532 -25878618 - MARNA DNA Mariner -203 383 167 22 0 0 0 chr5 173751812 173751834 -25878316 + AT_rich Low_complexity Low_complexity 1 22 0 243 368 62 14 chr5 173752008 173752152 -25877998 - L2 LINE L2 0 3272 3122 2083 108 0 17 chr5 173752172 173752486 -25877664 - AluY SINE Alu 0 309 1 186 167 0 0 chr5 173752907 173752943 -25877207 + (CA)n Simple_repeat Simple_repeat 1 36 0 282 277 36 36 chr5 173752943 173753055 -25877095 + (CATG)n Simple_repeat Simple_repeat 3 114 0 385 303 72 36 chr5 173753501 173753722 -25876428 + MIR SINE MIR 16 244 -18 975 290 104 32 chr5 173753904 173754436 -25875714 - L2 LINE L2 0 3313 2762 182 259 35 17 chr5 173754646 173754704 -25875446 - L2 LINE L2 -63 3250 3192 1002 221 37 28 chr5 173754707 173754924 -25875226 - MER20 DNA MER1_type 0 219 1 628 229 14 14 chr5 173755045 173755189 -25874961 + MLT1A2 LTR MaLR 1 144 -230 5711 150 24 5 chr5 173755301 173756612 -25873538 - L1M1 LINE L1 -664 7057 5722 2506 87 17 23 chr5 173756628 173756975 -25873175 - L1PB1 LINE L1 -6 6145 5801 2974 97 11 2 chr5 173756979 173757488 -25872662 - L1P LINE L1 -5418 728 2 10884 212 37 12 chr5 173757489 173760343 -25869807 - L1 LINE L1 -1581 4565 1655 4915 191 20 35 chr5 173760339 173761437 -25868713 - L1M1 LINE L1 -2145 5420 4339 * 5791 80 22 55 chr5 173761444 173762562 -25867588 + SVA Other Other 1 866 -520 6395 70 10 58 chr5 173762671 173763719 -25866431 + SVA Other Other 430 1429 0 852 208 6 0 chr5 173763719 173763892 -25866258 - L1M1 LINE L1 -3215 4350 4177 17919 147 58 39 chr5 173763923 173764021 -25866129 - L1M1 LINE L1 -4206 3359 3264 2429 80 0 3 chr5 173764021 173764320 -25865830 + AluSg SINE Alu 1 298 -12 17919 147 58 39 chr5 173764320 173767495 -25862655 - L1M1 LINE L1 -4301 3264 25 242 143 0 0 chr5 173767496 173767531 -25862619 + MER105 DNA DNA 35 69 -135 898 215 11 11 chr5 173767582 173767768 -25862382 - MIR SINE MIR -17 245 60 342 286 163 40 chr5 173767816 173768043 -25862107 + MIR SINE MIR 8 262 0 199 319 14 14 chr5 173768121 173768193 -25861957 + L2 LINE L2 3241 3312 -1 202 128 26 0 chr5 173769251 173769290 -25860860 + (CA)n Simple_repeat Simple_repeat 1 40 0 264 232 316 0 chr5 173770052 173770147 -25860003 - MIR SINE MIR -20 242 118 256 309 135 0 chr5 173772443 173772569 -25857581 - MIR SINE MIR 0 262 120 180 0 0 0 chr5 173772650 173772670 -25857480 + (TA)n Simple_repeat Simple_repeat 1 20 0 3864 85 2 0 chr5 173772670 173773151 -25856999 - L1PA7 LINE L1 -19 6135 5654 660 238 110 26 chr5 173773461 173773688 -25856462 - MIR SINE MIR -10 252 7 1319 266 22 19 chr5 173774490 173774851 -25855299 + MER93a LTR ERV1 37 398 -4 1035 242 0 16 chr5 173775255 173775511 -25854639 + MIR SINE MIR 1 252 -10 231 250 13 53 chr5 173775614 173775690 -25854460 + MIR SINE MIR 12 84 -178 576 291 141 5 chr5 173775737 173775950 -25854200 + MIR SINE MIR 8 249 -13 2415 71 0 29 chr5 173776062 173776371 -25853779 + AluY SINE Alu 2 301 -10 4955 164 12 9 chr5 173776371 173777249 -25852901 - L1MB3 LINE L1 -19 6164 5281 2040 115 3 20 chr5 173777587 173777603 -25852547 + L1MB1 LINE L1 5874 5889 -279 1469 152 68 79 chr5 173777603 173777972 -25852178 - MLT1A1 LTR MaLR 0 365 1 2040 115 3 20 chr5 173777972 173778251 -25851899 + L1MB1 LINE L1 5889 6164 -4 2349 58 44 3 chr5 173778418 173778713 -25851437 - AluY SINE Alu -4 307 1 194 276 83 103 chr5 173780033 173780110 -25850040 + MIR SINE MIR 89 163 -99 653 153 8 57 chr5 173780110 173780234 -25849916 + L1MC1 LINE L1 6216 6333 0 194 276 83 103 chr5 173780234 173780301 -25849849 + MIR SINE MIR 163 230 -32 1044 172 13 86 chr5 173780370 173780602 -25849548 - MER20 DNA MER1_type -4 215 1 236 328 33 52 chr5 173780996 173781167 -25848983 - MIR3 SINE MIR -21 187 20 785 209 81 12 chr5 173781370 173781542 -25848608 - MER5A DNA MER1_type -1 188 5 361 304 136 8 chr5 173781550 173781675 -25848475 + MIR SINE MIR 13 153 -109 501 290 57 23 chr5 173783593 173783769 -25846381 + MIR SINE MIR 22 203 -59 217 336 32 96 chr5 173783838 173783963 -25846187 + L2 LINE L2 3150 3266 -6 332 265 104 67 chr5 173784788 173785056 -25845094 - MLT1K LTR MaLR -123 465 188 231 170 64 0 chr5 173785326 173785373 -25844777 - MIR SINE MIR -95 167 118 4653 81 7 0 chr5 173785409 173786000 -25844150 - L1PA13 LINE L1 -3 6160 5566 2576 141 32 35 chr5 173786015 173786449 -25843701 - Tigger2a DNA MER2_type -1 433 1 193 267 0 0 chr5 173786920 173786965 -25843185 - MIR SINE MIR -118 144 100 515 300 44 6 chr5 173787867 173788027 -25842123 + MER5B DNA MER1_type 4 169 -9 503 265 53 12 chr5 173788083 173788253 -25841897 + MIR SINE MIR 34 210 -52 2855 220 41 3 chr5 173788367 173788957 -25841193 + MER90 LTR ERV1 1 612 -2 327 147 53 40 chr5 173790483 173790558 -25839592 - L2 LINE L2 -9 3304 3229 2301 93 0 3 chr5 173792620 173792922 -25837228 - AluY SINE Alu -2 309 9 225 0 0 0 chr5 173793636 173793661 -25836489 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2573 77 0 0 chr5 173794101 173794412 -25835738 + AluY SINE Alu 1 311 0 254 210 65 0 chr5 173795058 173795120 -25835030 + L2 LINE L2 3245 3310 -3 206 415 48 34 chr5 173795133 173795280 -25834870 + L2 LINE L2 3123 3271 -1 4327 107 39 85 chr5 173795581 173796439 -25833711 - L1PA14 LINE L1 -1 6160 5343 2120 111 7 0 chr5 173796446 173796726 -25833424 + AluSx SINE Alu 23 304 -8 993 164 34 0 chr5 173796732 173796940 -25833210 + L1P LINE L1 5129 5343 -803 638 265 97 10 chr5 173797340 173797536 -25832614 + MIR SINE MIR 14 226 -36 1040 179 85 0 chr5 173797622 173797823 -25832327 - MER20 DNA MER1_type -1 218 1 22 0 0 0 chr5 173798758 173798780 -25831370 + AT_rich Low_complexity Low_complexity 1 22 0 652 97 0 0 chr5 173799260 173799353 -25830797 + L1PA10 LINE L1 6066 6158 -10 344 294 50 0 chr5 173800616 173800735 -25829415 - MIR SINE MIR -81 181 57 1647 163 36 39 chr5 173802696 173803002 -25827148 + AluJo SINE Alu 1 305 -7 940 231 5 0 chr5 173805021 173805207 -25824943 - MER5A DNA MER1_type -1 188 2 267 79 0 0 chr5 173806299 173806337 -25823813 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 468 311 39 95 chr5 173806338 173806727 -25823423 - L2 LINE L2 -12 3260 2894 411 291 0 19 chr5 173806704 173806807 -25823343 - MER91A DNA MER1_type -84 112 12 * 1762 305 128 29 chr5 173806817 173808078 -25822072 + L2 LINE L2 1914 3313 0 263 309 178 21 chr5 173808324 173808515 -25821635 + MIR SINE MIR 28 248 -14 210 263 79 13 chr5 173808764 173808840 -25821310 - L2 LINE L2 0 3313 3233 203 393 12 10 chr5 173808991 173809092 -25821058 + MIR SINE MIR 11 113 -95 443 281 36 22 chr5 173810402 173810541 -25819609 + MIR SINE MIR 15 155 -107 420 358 49 28 chr5 173810849 173811173 -25818977 - L2 LINE L2 -435 2879 2549 489 330 54 25 chr5 173811845 173812048 -25818102 - MIR SINE MIR -34 228 20 183 162 0 0 chr5 173812675 173812712 -25817438 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 295 300 85 31 chr5 173813071 173813201 -25816949 + MIR SINE MIR 61 197 -65 279 0 0 0 chr5 173814179 173814210 -25815940 + (CA)n Simple_repeat Simple_repeat 2 32 0 208 125 62 42 chr5 173815330 173815378 -25814772 + (CACCC)n Simple_repeat Simple_repeat 4 52 0 522 300 101 4 chr5 173817318 173817545 -25812605 - MIR SINE MIR -2 260 12 26 82 0 0 chr5 173818228 173818289 -25811861 + AT_rich Low_complexity Low_complexity 1 61 0 440 292 102 27 chr5 173819674 173820006 -25810144 + L1ME4a LINE L1 5751 6107 -14 201 340 58 19 chr5 173821208 173821311 -25808839 + MIR SINE MIR 156 262 0 279 325 86 53 chr5 173821331 173821540 -25808610 + L3 LINE CR1 1011 1226 -351 636 300 126 0 chr5 173821573 173821803 -25808347 - MIR SINE MIR 0 262 4 545 322 101 18 chr5 173821813 173822099 -25808051 + L3 LINE CR1 1257 1566 -11 186 286 0 16 chr5 173822733 173822796 -25807354 + L2 LINE L2 3248 3309 -4 1138 149 17 0 chr5 173822827 173823001 -25807149 + MER5A DNA MER1_type 1 177 -12 548 338 62 48 chr5 173823756 173824503 -25805647 + L2 LINE L2 2551 3307 -6 5337 116 40 1 chr5 173824827 173826213 -25803937 + L1PA13 LINE L1 4736 6163 0 218 244 0 0 chr5 173826863 173826904 -25803246 + L2 LINE L2 3214 3254 -18 675 223 34 17 chr5 173826922 173827097 -25803053 - MER5B DNA MER1_type 0 178 1 21 0 0 0 chr5 173827336 173827357 -25802793 + AT_rich Low_complexity Low_complexity 1 21 0 214 171 0 0 chr5 173828069 173828110 -25802040 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 1719 294 56 7 chr5 173828112 173828703 -25801447 + L2 LINE L2 678 1297 -2017 2371 148 39 14 chr5 173828713 173829147 -25801003 + MLT1C LTR MaLR 1 445 -22 3977 242 139 36 chr5 173829155 173829592 -25800558 + L2 LINE L2 1307 1698 -1615 2387 77 0 46 chr5 173829592 173829916 -25800234 - AluY SINE Alu -2 309 1 3977 242 139 36 chr5 173829916 173831112 -25799038 + L2 LINE L2 1698 3106 -207 1220 175 160 52 chr5 173831175 173831518 -25798632 - MLT1B LTR MaLR -10 380 1 374 352 8 0 chr5 173831568 173831696 -25798454 + L2 LINE L2 3185 3313 0 226 293 71 39 chr5 173831748 173831907 -25798243 + MIR SINE MIR 32 204 -58 363 268 41 16 chr5 173832013 173832136 -25798014 - MIR SINE MIR -16 246 121 23 54 0 0 chr5 173832766 173832803 -25797347 + AT_rich Low_complexity Low_complexity 1 37 0 720 308 60 37 chr5 173833689 173833827 -25796323 + L2 LINE L2 2951 3084 -229 1586 202 41 22 chr5 173833827 173834194 -25795956 - MLT1A2 LTR MaLR 0 374 1 720 308 60 37 chr5 173834194 173834406 -25795744 + L2 LINE L2 3084 3309 -4 257 366 11 0 chr5 173834547 173834640 -25795510 - L2 LINE L2 0 3272 3179 298 291 67 97 chr5 173834747 173835015 -25795135 - L2 LINE L2 -346 2968 2709 337 351 79 22 chr5 173835395 173835612 -25794538 + MIR SINE MIR 34 257 -5 202 277 176 8 chr5 173835695 173835814 -25794336 + MIR SINE MIR 124 262 0 195 364 88 19 chr5 173837412 173837720 -25792430 + L2 LINE L2 2641 2969 -345 25 31 0 0 chr5 173838180 173838212 -25791938 + AT_rich Low_complexity Low_complexity 1 32 0 403 292 44 7 chr5 173839644 173839790 -25790360 + MIR SINE MIR 40 189 -68 5646 232 76 34 chr5 173839819 173840951 -25789199 + L1MB7 LINE L1 14 1097 -5728 1891 182 3 10 chr5 173840951 173841264 -25788886 - AluJo SINE Alu -1 311 1 5646 232 76 34 chr5 173841264 173842596 -25787554 + L1MB7 LINE L1 1097 2695 -4130 3530 219 39 8 chr5 173842649 173843523 -25786627 + L1MB7 LINE L1 4766 5666 -978 452 230 0 0 chr5 173843525 173843612 -25786538 - Tigger5 DNA MER2_type 0 2323 2237 225 214 0 0 chr5 173843622 173843664 -25786486 - Tigger5 DNA MER2_type -2268 55 14 303 239 28 0 chr5 173843665 173843736 -25786414 - Tigger5 DNA MER2_type 0 2323 2251 3194 170 61 68 chr5 173843756 173843944 -25786206 + L1MB7 LINE L1 5663 5851 -831 1723 201 0 7 chr5 173843944 173844247 -25785903 + AluJb SINE Alu 1 301 -11 3194 170 61 68 chr5 173844247 173844923 -25785227 + L1MB7 LINE L1 5851 6522 -160 240 211 42 0 chr5 173844940 173845011 -25785139 + (TA)n Simple_repeat Simple_repeat 1 74 0 1934 268 53 42 chr5 173845011 173845938 -25784212 + L1ME3A LINE L1 3488 4424 -2220 859 291 38 73 chr5 173846222 173846672 -25783478 - L2 LINE L2 -542 2772 2339 710 175 13 20 chr5 173846683 173846871 -25783279 + L1ME3A LINE L1 5651 5837 -840 1492 74 53 0 chr5 173846941 173847131 -25783019 - L1PA5 LINE L1 0 6154 5955 397 315 214 6 chr5 173847132 173847459 -25782691 - L2 LINE L2 -966 2348 1954 180 284 108 0 chr5 173847610 173847684 -25782466 - MIR SINE MIR -130 132 51 1066 261 32 11 chr5 173847855 173848466 -25781684 + L1ME3A LINE L1 5901 6647 -21 449 280 145 45 chr5 173848497 173849168 -25780982 - L1ME4a LINE L1 -59 6062 5315 299 356 11 0 chr5 173849811 173849901 -25780249 - L2 LINE L2 -26 3246 3156 477 360 23 14 chr5 173850342 173850556 -25779594 - MLT1K LTR MaLR -119 469 254 4106 150 48 60 chr5 173853135 173853930 -25776220 - LTR1 LTR ERV1 0 785 1 382 189 57 81 chr5 173854361 173854487 -25775663 + MER91B DNA MER1_type 1 127 -63 347 317 0 10 chr5 173854504 173854608 -25775542 + MER91B DNA MER1_type 87 189 -1 187 269 0 39 chr5 173859841 173859893 -25770257 - L3 LINE CR1 -1233 344 295 241 304 20 39 chr5 173860621 173860723 -25769427 + MIR SINE MIR 41 140 -68 2136 108 0 0 chr5 173861039 173861356 -25768794 - AluSc SINE Alu 0 321 5 1977 149 0 32 chr5 173862202 173862518 -25767632 - AluSx SINE Alu -6 306 1 778 315 135 17 chr5 173862645 173863253 -25766897 - L2 LINE L2 -14 3299 2628 377 298 99 6 chr5 173863654 173863815 -25766335 + MIR3 SINE MIR 33 208 0 1135 116 3 12 chr5 173864121 173864314 -25765836 - L1M1 LINE L1 -598 5704 5512 351 329 140 63 chr5 173865350 173865794 -25764356 + L2 LINE L2 2758 3229 -43 195 227 23 0 chr5 173866347 173866391 -25763759 - MIR SINE MIR -12 250 206 261 214 0 43 chr5 173866673 173866743 -25763407 - MLT1K LTR MaLR -388 161 95 2612 14 0 3 chr5 173867772 173868061 -25762089 + AluYb8 SINE Alu 19 306 -12 233 293 13 0 chr5 173868988 173869063 -25761087 + L1ME LINE L1 5718 5793 -328 237 319 54 54 chr5 173869087 173869253 -25760897 - MIR SINE MIR 0 262 97 1709 177 7 13 chr5 173869499 173869798 -25760352 + AluJb SINE Alu 1 297 -15 766 85 0 0 chr5 173870694 173870788 -25759362 - FRAM SINE Alu -48 128 35 3376 186 96 20 chr5 173870925 173871657 -25758493 + LTR48 LTR ERV1 1 787 0 260 377 75 7 chr5 173872017 173872163 -25757987 + L2 LINE L2 3117 3272 0 581 324 70 7 chr5 173872718 173873002 -25757148 + L2 LINE L2 2417 2718 -596 478 304 114 9 chr5 173873071 173873298 -25756852 - L2 LINE L2 -1479 1835 1585 180 0 0 0 chr5 173873430 173873450 -25756700 + (TTG)n Simple_repeat Simple_repeat 2 21 0 769 216 45 71 chr5 173873780 173874049 -25756101 + Charlie8 DNA MER1_type 1 262 -2155 2344 74 3 10 chr5 173874092 173874390 -25755760 - AluY SINE Alu -15 296 1 302 276 81 0 chr5 173874470 173874557 -25755593 + L2 LINE L2 3171 3264 -8 * 340 332 65 100 chr5 173874550 173875008 -25755142 + L2 LINE L2 2831 3272 0 180 384 134 0 chr5 173875126 173875238 -25754912 + L2 LINE L2 3097 3223 -49 21 0 0 0 chr5 173876244 173876265 -25753885 + AT_rich Low_complexity Low_complexity 1 21 0 267 133 0 0 chr5 173877145 173877190 -25752960 + (T)n Simple_repeat Simple_repeat 1 45 0 288 111 0 0 chr5 173878897 173878942 -25751208 + (T)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr5 173879574 173879596 -25750554 + AT_rich Low_complexity Low_complexity 1 22 0 226 352 23 0 chr5 173880282 173880370 -25749780 + MIR SINE MIR 167 256 -6 * 327 279 66 49 chr5 173880368 173880551 -25749599 + MIR SINE MIR 44 229 -33 21 0 0 0 chr5 173881609 173881630 -25748520 + AT_rich Low_complexity Low_complexity 1 21 0 336 248 68 49 chr5 173881769 173881977 -25748173 - Charlie8 DNA MER1_type -1002 1415 117 1156 50 0 0 chr5 173882884 173883025 -25747125 + AluY SINE Alu 171 311 0 451 272 83 24 chr5 173884270 173884439 -25745711 + MIR SINE MIR 3 181 -81 1880 134 58 0 chr5 173885240 173885531 -25744619 - AluSx SINE Alu -4 308 1 426 319 106 16 chr5 173886613 173886801 -25743349 + MIR SINE MIR 14 218 -44 501 300 93 25 chr5 173886963 173887200 -25742950 + MIR SINE MIR 4 256 -6 433 299 28 7 chr5 173887304 173887448 -25742702 + MIR SINE MIR 46 192 -70 255 203 0 17 chr5 173888634 173888693 -25741457 - L2 LINE L2 -18 3295 3238 226 265 145 43 chr5 173889604 173889721 -25740429 - MIR3 SINE MIR -76 132 4 376 316 22 7 chr5 173891667 173891803 -25738347 - MIR SINE MIR -29 233 96 988 129 0 14 chr5 173891907 173892054 -25738096 - FRAM SINE Alu -2 174 30 516 295 13 66 chr5 173893460 173893687 -25736463 - MIR SINE MIR -33 229 15 595 297 21 10 chr5 173898793 173898985 -25731165 - MIR SINE MIR -68 194 1 180 372 80 0 chr5 173899135 173899248 -25730902 + L2 LINE L2 3141 3262 -10 292 315 169 0 chr5 173903556 173903686 -25726464 + MIR SINE MIR 9 160 -102 383 236 0 22 chr5 173903912 173904001 -25726149 + MIR SINE MIR 70 156 -106 192 135 0 0 chr5 173904559 173904596 -25725554 + (GA)n Simple_repeat Simple_repeat 1 37 0 287 286 50 57 chr5 173907019 173907159 -25722991 + MIR SINE MIR 8 146 -116 317 273 166 7 chr5 173907188 173907327 -25722823 - MIR SINE MIR -12 250 90 1315 206 22 11 chr5 173908800 173909077 -25721073 - AluJo SINE Alu -21 291 12 445 269 36 24 chr5 173909088 173909255 -25720895 - MIR SINE MIR -13 249 81 428 266 16 39 chr5 173909388 173909516 -25720634 - MIR SINE MIR -102 160 36 853 237 40 31 chr5 173910893 173911121 -25719029 + MIR SINE MIR 12 241 -21 382 234 143 32 chr5 173914242 173914494 -25715656 + L1ME4a LINE L1 5841 6120 -1 2622 45 0 3 chr5 173917449 173917758 -25712392 - AluY SINE Alu 0 311 4 21 0 0 0 chr5 173918198 173918219 -25711931 + AT_rich Low_complexity Low_complexity 1 21 0 290 307 55 16 chr5 173918769 173918896 -25711254 - MIR SINE MIR -50 212 81 1899 238 27 41 chr5 173921049 173921470 -25708680 - MER119 DNA MER1_type 0 583 170 1862 186 0 0 chr5 173921470 173921771 -25708379 + AluJo SINE Alu 1 301 -11 1899 238 27 41 chr5 173921771 173921909 -25708241 - MER119 DNA MER1_type -413 170 32 841 234 97 9 chr5 173922030 173922257 -25707893 - MIR SINE MIR 0 262 16 210 319 62 44 chr5 173922490 173922603 -25707547 + MIR SINE MIR 33 147 -115 309 296 37 37 chr5 173922681 173922816 -25707334 - L2 LINE L2 -34 3238 3104 21 0 0 0 chr5 173923092 173923113 -25707037 + AT_rich Low_complexity Low_complexity 1 21 0 289 340 150 47 chr5 173923238 173924067 -25706083 - L2 LINE L2 -86 3186 2196 1888 128 70 0 chr5 173924067 173924340 -25705810 + AluSx SINE Alu 1 292 -20 289 340 150 47 chr5 173924340 173924636 -25705514 - L2 LINE L2 -1076 2196 1932 203 392 14 0 chr5 173927294 173927368 -25702782 - MIR SINE MIR -87 121 47 252 283 109 11 chr5 173927454 173927546 -25702604 - MIR SINE MIR -45 217 117 436 240 75 60 chr5 173927905 173928105 -25702045 - MIR SINE MIR 0 262 60 605 199 112 59 chr5 173931068 173931424 -25698726 + L1ME4a LINE L1 5734 6108 -13 645 276 110 22 chr5 173931696 173931924 -25698226 + MIR SINE MIR 3 250 -12 237 366 0 0 chr5 173932200 173932282 -25697868 + L2 LINE L2 3186 3267 -5 198 143 0 0 chr5 173939337 173939372 -25690778 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 192 77 0 0 chr5 173939606 173939632 -25690518 + (A)n Simple_repeat Simple_repeat 1 26 0 324 359 43 0 chr5 173940058 173940175 -25689975 + L2 LINE L2 3151 3272 0 839 262 44 0 chr5 173940238 173940463 -25689687 + MIR SINE MIR 20 254 -8 245 311 56 0 chr5 173940506 173940596 -25689554 - L2 LINE L2 -5 3267 3173 319 342 27 32 chr5 173940630 173940817 -25689333 - MIR SINE MIR 0 262 77 429 36 0 0 chr5 173944312 173944368 -25685782 - AluY SINE Alu -9 309 254 314 282 113 62 chr5 173945375 173945570 -25684580 + L2 LINE L2 3109 3313 0 25 0 0 0 chr5 173946208 173946233 -25683917 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr5 173946595 173946617 -25683533 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 2322 78 0 0 chr5 173948192 173948498 -25681652 - AluY SINE Alu 0 306 1 423 288 0 0 chr5 173949505 173949616 -25680534 + MIR3 SINE MIR 82 192 -16 656 246 123 14 chr5 173949653 173949864 -25680286 - MIR SINE MIR -1 261 28 267 336 28 49 chr5 173949934 173950077 -25680073 + MIR3 SINE MIR 31 170 -38 469 254 97 38 chr5 173950135 173950320 -25679830 - L2 LINE L2 0 3313 3118 208 292 31 50 chr5 173950504 173950625 -25679525 + MIR SINE MIR 55 171 -62 370 274 45 13 chr5 173952333 173952490 -25677660 + L1ME4a LINE L1 5746 5907 -214 284 287 93 8 chr5 173952850 173952979 -25677171 + L1ME4a LINE L1 5973 6112 -9 293 289 156 16 chr5 173953134 173953262 -25676888 + MIR SINE MIR 23 168 -94 930 322 48 82 chr5 173955819 173956709 -25673441 + L2 LINE L2 2411 3271 -1 319 266 110 18 chr5 173956900 173957009 -25673141 - MIR SINE MIR -20 242 124 382 293 71 14 chr5 173957442 173957582 -25672568 - MIR3 SINE MIR -52 156 9 188 300 0 0 chr5 173957661 173957711 -25672439 - L2 LINE L2 -362 2910 2861 397 311 61 6 chr5 173958520 173958684 -25671466 - MIR SINE MIR -41 221 49 284 336 10 10 chr5 173958739 173958843 -25671307 + GA-rich Low_complexity Low_complexity 2 105 0 22 0 0 0 chr5 173960641 173960663 -25669487 + AT_rich Low_complexity Low_complexity 1 22 0 663 37 0 0 chr5 173961409 173961491 -25668659 + (CA)n Simple_repeat Simple_repeat 2 83 0 198 0 0 0 chr5 173961971 173961993 -25668157 + (GA)n Simple_repeat Simple_repeat 1 22 0 388 182 57 23 chr5 173962307 173962395 -25667755 + MER5A DNA MER1_type 16 106 -83 341 331 17 51 chr5 173965801 173965979 -25664171 - MIR3 SINE MIR -3 205 34 839 200 115 95 chr5 173966069 173966575 -25663575 + MER113 DNA MER1_type? 6 521 0 341 349 120 45 chr5 173966926 173967676 -25662474 + L2 LINE L2 2044 2849 -465 228 329 38 0 chr5 173967791 173967870 -25662280 + L2 LINE L2 2995 3076 -196 1842 152 17 17 chr5 173968038 173968351 -25661799 + AluJb SINE Alu 1 313 0 424 259 81 6 chr5 173968985 173969159 -25660991 + L1ME4a LINE L1 5933 6119 -2 338 317 122 6 chr5 173969755 173969935 -25660215 - MIR SINE MIR -1 261 61 23 33 0 0 chr5 173970682 173970712 -25659438 + AT_rich Low_complexity Low_complexity 1 30 0 488 252 19 63 chr5 173971533 173971692 -25658458 + L2 LINE L2 3162 3313 0 33 25 0 0 chr5 173972055 173972095 -25658055 + AT_rich Low_complexity Low_complexity 1 40 0 567 314 12 39 chr5 173973237 173973492 -25656658 + MIR SINE MIR 15 262 0 219 36 0 0 chr5 173973681 173973709 -25656441 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 214 245 19 0 chr5 173973722 173973775 -25656375 - L2 LINE L2 -6 3266 3213 267 290 69 69 chr5 173975243 173975388 -25654762 + MIR3 SINE MIR 33 177 -31 2271 117 0 0 chr5 173976706 173977005 -25653145 + AluSg SINE Alu 1 299 -11 261 346 28 60 chr5 173977005 173977177 -25652973 - MIR3 SINE MIR -16 192 25 539 322 96 26 chr5 173978693 173978923 -25651227 + MIR SINE MIR 17 262 0 203 208 19 19 chr5 173979081 173979134 -25651016 + (CTA)n Simple_repeat Simple_repeat 3 55 0 606 275 101 0 chr5 173979259 173979448 -25650702 + MIR SINE MIR 52 259 -3 306 331 53 0 chr5 173981001 173981134 -25649016 + MIR SINE MIR 110 249 -13 1423 194 60 18 chr5 173984816 173985100 -25645050 + AluJo SINE Alu 3 298 -14 23 0 0 0 chr5 173985100 173985123 -25645027 + AT_rich Low_complexity Low_complexity 1 23 0 680 307 34 13 chr5 173985389 173985627 -25644523 - Charlie8 DNA MER1_type -2166 251 9 318 286 78 22 chr5 173985673 173985959 -25644191 + L1MC4a LINE L1 5653 5954 -167 22 0 0 0 chr5 173986162 173986184 -25643966 + AT_rich Low_complexity Low_complexity 1 22 0 189 107 0 0 chr5 173987336 173987364 -25642786 + (A)n Simple_repeat Simple_repeat 1 28 0 217 146 0 24 chr5 173989318 173989359 -25640791 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 354 23 0 0 chr5 173989608 173989651 -25640499 + (TG)n Simple_repeat Simple_repeat 1 43 0 1017 160 44 34 chr5 173992575 173992781 -25637369 - MER3 DNA MER1_type -1 208 1 698 293 23 55 chr5 173992911 173993259 -25636891 - MER102b DNA MER1_type -1 340 4 671 245 53 58 chr5 173994151 173994359 -25635791 + MIR SINE MIR 13 219 -43 269 313 0 0 chr5 173994377 173994457 -25635693 + GA-rich Low_complexity Low_complexity 2 81 0 205 270 16 16 chr5 173995920 173995983 -25634167 + MIR SINE MIR 194 256 -6 305 328 31 8 chr5 173997180 173997308 -25632842 + MIR SINE MIR 117 247 -15 216 256 122 67 chr5 173997783 173997873 -25632277 + L2 LINE L2 3178 3272 0 393 188 152 18 chr5 173999319 173999431 -25630719 - MIR3 SINE MIR -21 187 61 1574 145 38 28 chr5 173999736 174000025 -25630125 + AluJo SINE Alu 1 292 -20 531 294 7 7 chr5 174000761 174000907 -25629243 + MIR SINE MIR 13 158 -104 628 285 42 19 chr5 174000969 174001183 -25628967 + MIR SINE MIR 37 255 -7 230 259 148 37 chr5 174002092 174002173 -25627977 + MIR3 SINE MIR 76 165 -43 469 356 114 43 chr5 174002762 174002938 -25627212 + L2 LINE L2 2804 2966 -306 1491 185 144 50 chr5 174002938 174003300 -25626850 + MSTD LTR MaLR 1 396 0 469 356 114 43 chr5 174003300 174003544 -25626606 + L2 LINE L2 2966 3254 -18 253 280 56 32 chr5 174003700 174003825 -25626325 - MIR3 SINE MIR -3 205 78 205 133 22 22 chr5 174003944 174003989 -25626161 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 216 273 0 0 chr5 174004746 174004790 -25625360 + polypurine Low_complexity Low_complexity 4 47 0 449 232 205 62 chr5 174006539 174006798 -25623352 + MER102a DNA MER1_type 1 296 -34 302 282 73 48 chr5 174006836 174006960 -25623190 - MIR3 SINE MIR -52 156 30 798 89 0 0 chr5 174007919 174008031 -25622119 + (TGGA)n Simple_repeat Simple_repeat 1 112 0 659 271 88 0 chr5 174011963 174012155 -25617995 - MER3 DNA MER1_type 0 209 1 527 241 96 37 chr5 174012613 174012800 -25617350 + MIR SINE MIR 58 255 -7 21 36 0 0 chr5 174013532 174013560 -25616590 + AT_rich Low_complexity Low_complexity 1 28 0 454 155 204 0 chr5 174013829 174013932 -25616218 + L1MD2 LINE L1 5788 5911 -331 749 158 140 12 chr5 174013932 174014096 -25616054 + MLT1B LTR MaLR 1 185 -205 1426 221 32 9 chr5 174014100 174014440 -25615710 + L1MD2 LINE L1 6012 6359 0 3077 149 53 37 chr5 174014447 174014858 -25615292 + L1MC2 LINE L1 5736 6162 -182 1678 166 3 30 chr5 174014858 174015153 -25614997 - AluJb SINE Alu -25 287 1 3077 149 53 37 chr5 174015153 174015339 -25614811 + L1MC2 LINE L1 6162 6343 -1 206 314 0 0 chr5 174015415 174015466 -25614684 - MIR3 SINE MIR -7 201 151 276 305 53 30 chr5 174015793 174015924 -25614226 - MIR3 SINE MIR -53 155 22 2033 128 3 3 chr5 174015949 174016238 -25613912 - AluSc SINE Alu -20 289 1 370 308 19 19 chr5 174016933 174017037 -25613113 + MIR SINE MIR 6 109 -153 576 306 47 28 chr5 174017063 174017318 -25612832 - L2 LINE L2 -28 3285 3026 925 143 0 0 chr5 174017337 174017470 -25612680 - AluSq/x SINE Alu -180 133 1 381 298 0 60 chr5 174017510 174017661 -25612489 - L2 LINE L2 -341 2972 2831 200 338 0 0 chr5 174017646 174017717 -25612433 + MIR SINE MIR 179 249 -13 * 213 331 79 24 chr5 174018658 174018785 -25611365 + L2 LINE L2 2936 3069 -244 1286 103 36 26 chr5 174018795 174018990 -25611160 + AluSc SINE Alu 107 303 -6 439 184 88 18 chr5 174019139 174019253 -25610897 + MLT1J2 LTR MaLR 32 153 -297 370 346 28 33 chr5 174019299 174019510 -25610640 + MLT1J2 LTR MaLR 230 439 -11 266 343 0 0 chr5 174019515 174019585 -25610565 + L2 LINE L2 3193 3262 -51 617 278 26 31 chr5 174021384 174021611 -25608539 + MIR SINE MIR 36 261 -1 225 327 151 5 chr5 174021805 174022010 -25608140 - L2 LINE L2 -942 2372 2138 1159 163 8 100 chr5 174022764 174023004 -25607146 + MER20 DNA MER1_type 1 218 -1 228 283 0 0 chr5 174023149 174023202 -25606948 - MIR SINE MIR -61 147 95 2435 86 0 10 chr5 174023833 174024147 -25606003 + AluY SINE Alu 1 311 0 342 248 307 0 chr5 174024603 174024740 -25605410 + MER5A DNA MER1_type 9 187 -2 1611 202 16 16 chr5 174025040 174025352 -25604798 - AluSx SINE Alu 0 312 1 2896 6 0 0 chr5 174026328 174026639 -25603511 - AluYa5 SINE Alu 0 311 1 733 216 0 0 chr5 174026765 174026899 -25603251 - MER94 DNA DNA 0 134 1 540 322 16 22 chr5 174028135 174028318 -25601832 + MIR SINE MIR 4 185 -77 748 271 115 5 chr5 174028390 174028608 -25601542 - MIR SINE MIR -16 246 5 427 269 71 35 chr5 174030178 174030319 -25599831 - MIR3 SINE MIR -31 177 32 201 380 0 13 chr5 174030743 174030822 -25599328 + L2 LINE L2 3194 3271 -1 237 238 63 0 chr5 174030940 174031003 -25599147 + MIR SINE MIR 113 179 -83 756 278 22 6 chr5 174031016 174031196 -25598954 + MIR SINE MIR 57 239 -23 180 315 41 14 chr5 174031188 174031261 -25598889 + L2 LINE L2 3174 3248 -24 * 195 129 0 0 chr5 174031368 174031399 -25598751 + (A)n Simple_repeat Simple_repeat 1 31 0 753 266 83 9 chr5 174033724 174033942 -25596208 - MIR SINE MIR -21 241 8 23 0 0 0 chr5 174034085 174034108 -25596042 + AT_rich Low_complexity Low_complexity 1 23 0 205 313 61 61 chr5 174034941 174035171 -25594979 + L2 LINE L2 2841 3070 -202 249 228 208 40 chr5 174035996 174036097 -25594053 - L2 LINE L2 -6 3266 3149 185 148 0 0 chr5 174036229 174036256 -25593894 + MER5A DNA MER1_type 157 183 -6 2011 122 36 0 chr5 174036394 174036673 -25593477 + AluSx SINE Alu 1 289 -23 1666 131 26 0 chr5 174036768 174036997 -25593153 + AluSx SINE Alu 1 235 -77 354 112 84 28 chr5 174037026 174037133 -25593017 + GA-rich Low_complexity Low_complexity 4 116 0 377 281 144 13 chr5 174037344 174037497 -25592653 - MIR SINE MIR -43 219 47 1583 112 85 68 chr5 174037699 174037994 -25592156 - AluSx SINE Alu -12 300 1 236 361 10 0 chr5 174038163 174038260 -25591890 - MIR SINE MIR -2 260 163 521 313 92 17 chr5 174038663 174038903 -25591247 - MIR SINE MIR -3 259 2 284 267 53 0 chr5 174039273 174039348 -25590802 + L2 LINE L2 3194 3272 0 542 239 17 91 chr5 174040194 174040370 -25589780 - MIR SINE MIR -23 239 77 * 583 311 5 15 chr5 174040367 174040563 -25589587 - L2 LINE L2 -14 3299 3106 323 271 47 19 chr5 174040661 174040768 -25589382 + AluSq/x SINE Alu 1 110 -193 1028 211 50 0 chr5 174041274 174041473 -25588677 - MER3 DNA MER1_type 0 209 1 1524 168 21 7 chr5 174041583 174041868 -25588282 + L1MB7 LINE L1 5542 5830 -354 682 135 0 10 chr5 174042203 174042307 -25587843 + L1M3 LINE L1 5655 5757 -414 1223 191 5 14 chr5 174042309 174042519 -25587631 - AluJo SINE Alu -104 208 1 2318 166 24 98 chr5 174042766 174043309 -25586841 - MLT1D LTR MaLR -2 503 1 233 316 25 0 chr5 174043311 174043390 -25586760 + L2 LINE L2 3153 3233 -39 294 176 95 40 chr5 174044161 174044235 -25585915 + MLT1K LTR MaLR 434 511 -77 454 252 115 22 chr5 174044484 174044623 -25585527 - MIR3 SINE MIR -21 187 36 1464 177 30 20 chr5 174048171 174048471 -25581679 - AluJo SINE Alu -9 303 1 435 165 24 12 chr5 174048474 174048559 -25581591 - FLAM_A SINE Alu -10 132 47 1018 155 0 18 chr5 174048634 174048826 -25581324 - AluJo SINE Alu 0 309 121 2199 122 3 0 chr5 174048827 174049138 -25581012 - AluSx SINE Alu 0 312 1 680 294 52 32 chr5 174049260 174049512 -25580638 - MIR SINE MIR -2 260 4 865 152 0 0 chr5 174049556 174049681 -25580469 - AluJo SINE Alu -187 125 1 184 296 222 9 chr5 174049701 174049809 -25580341 + L2 LINE L2 3183 3313 0 519 233 46 112 chr5 174050302 174050598 -25579552 + MER102a DNA MER1_type 24 317 -13 183 184 0 0 chr5 174050675 174050713 -25579437 + (TG)n Simple_repeat Simple_repeat 1 38 0 442 355 24 68 chr5 174050995 174051333 -25578817 - MLT1K LTR MaLR -246 342 20 405 250 101 48 chr5 174052755 174052943 -25577207 - MIR SINE MIR -34 228 31 337 263 0 0 chr5 174053242 174053318 -25576832 - MIR SINE MIR -65 143 68 207 247 82 31 chr5 174053419 174053516 -25576634 + L2 LINE L2 2991 3092 -221 * 249 264 97 14 chr5 174053510 174053582 -25576568 + L2 LINE L2 3195 3272 0 284 269 50 59 chr5 174054591 174054710 -25575440 - MIR SINE MIR -127 135 18 207 0 0 0 chr5 174054860 174054883 -25575267 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 233 307 80 25 chr5 174057133 174057296 -25572854 + L2 LINE L2 2911 3082 -190 242 317 70 25 chr5 174057502 174057703 -25572447 + L2 LINE L2 2854 3062 -210 498 286 138 9 chr5 174058037 174058254 -25571896 - MIR SINE MIR -12 250 6 385 276 160 13 chr5 174059833 174060058 -25570092 - L1ME4a LINE L1 -249 5872 5615 2208 113 30 3 chr5 174061830 174062131 -25568019 + AluSx SINE Alu 1 309 -3 275 353 10 10 chr5 174062287 174062389 -25567761 - L3 LINE CR1 -7 1570 1469 219 271 159 51 chr5 174062394 174062736 -25567414 - L2 LINE L2 -39 3274 2848 440 326 76 52 chr5 174062800 174063160 -25566990 - L3 LINE CR1 -156 1421 1053 863 279 56 0 chr5 174063160 174063393 -25566757 + MIR SINE MIR 2 247 -15 368 276 134 0 chr5 174063899 174064026 -25566124 - MIR3 SINE MIR -7 201 58 414 57 0 0 chr5 174064692 174064745 -25565405 + (TA)n Simple_repeat Simple_repeat 1 53 0 324 0 0 0 chr5 174067431 174067467 -25562683 + (CA)n Simple_repeat Simple_repeat 2 37 0 1825 177 27 0 chr5 174068250 174068549 -25561601 + AluJb SINE Alu 1 307 -5 482 353 91 15 chr5 174068663 174069003 -25561147 + L3 LINE CR1 1137 1502 -75 23 0 0 0 chr5 174069195 174069218 -25560932 + AT_rich Low_complexity Low_complexity 1 23 0 433 306 90 0 chr5 174069499 174069643 -25560507 - MIR3 SINE MIR 0 208 52 1976 150 0 16 chr5 174070040 174070347 -25559803 - AluSg SINE Alu -8 302 1 234 0 0 0 chr5 174070844 174070870 -25559280 + (T)n Simple_repeat Simple_repeat 1 26 0 1125 249 93 33 chr5 174071243 174071692 -25558458 + MER113 DNA MER1_type? 1 476 -45 465 50 0 0 chr5 174072875 174072935 -25557215 + (CA)n Simple_repeat Simple_repeat 2 61 0 348 350 0 29 chr5 174073840 174073977 -25556173 - MIR3 SINE MIR 0 208 76 25 0 0 0 chr5 174073991 174074016 -25556134 + AT_rich Low_complexity Low_complexity 1 25 0 443 281 56 28 chr5 174074031 174074209 -25555941 - MIR SINE MIR 0 262 80 180 77 0 0 chr5 174075540 174075566 -25554584 + (CA)n Simple_repeat Simple_repeat 2 27 0 552 225 5 91 chr5 174076287 174076474 -25553676 - MIR SINE MIR -10 252 82 2045 138 0 13 chr5 174076493 174076797 -25553353 - AluSx SINE Alu -12 300 1 642 40 0 0 chr5 174077406 174077481 -25552669 - L1P2 LINE L1 -397 5757 5683 745 64 0 0 chr5 174077481 174077575 -25552575 + L1PA5 LINE L1 6061 6154 0 518 302 6 45 chr5 174077769 174077948 -25552202 - MIR3 SINE MIR -14 194 23 224 325 12 0 chr5 174081015 174081095 -25549055 + (TA)n Simple_repeat Simple_repeat 2 82 0 192 152 0 0 chr5 174081147 174081180 -25548970 + (TA)n Simple_repeat Simple_repeat 1 33 0 233 241 72 0 chr5 174081187 174081270 -25548880 - L1MC4 LINE L1 -1339 6703 6615 * 255 241 72 0 chr5 174081198 174081281 -25548869 + L1MC4 LINE L1 6615 6703 -1339 414 304 138 6 chr5 174081434 174081615 -25548535 - MIR SINE MIR -33 229 25 259 317 79 30 chr5 174081650 174081751 -25548399 - L2 LINE L2 -45 3227 3122 180 265 0 0 chr5 174082243 174082292 -25547858 + MIR SINE MIR 103 151 -111 * 290 364 44 47 chr5 174082289 174082564 -25547586 - L2 LINE L2 -4 3268 2995 592 322 54 8 chr5 174082590 174082829 -25547321 - MIR SINE MIR -7 255 6 229 356 118 50 chr5 174082845 174083244 -25546906 - L2 LINE L2 -338 2976 2551 434 353 67 13 chr5 174083428 174083666 -25546484 - MIR SINE MIR -4 258 8 2111 103 35 0 chr5 174084579 174084861 -25545289 + AluSq SINE Alu 1 292 -21 28 61 0 0 chr5 174085385 174085434 -25544716 + AT_rich Low_complexity Low_complexity 1 49 0 272 70 23 0 chr5 174086105 174086148 -25544002 + (TG)n Simple_repeat Simple_repeat 2 45 0 244 267 0 33 chr5 174087019 174087079 -25543071 + L2 LINE L2 3251 3308 -5 22 0 0 0 chr5 174087254 174087276 -25542874 + AT_rich Low_complexity Low_complexity 1 22 0 293 358 88 14 chr5 174087475 174087623 -25542527 - MIR3 SINE MIR -14 194 36 1425 190 109 6 chr5 174087630 174087941 -25542209 - MER2 DNA MER2_type 0 344 2 243 204 0 0 chr5 174089454 174089508 -25540642 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 189 0 0 0 chr5 174089754 174089775 -25540375 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 228 67 0 0 chr5 174089930 174089960 -25540190 + (CA)n Simple_repeat Simple_repeat 1 30 0 249 125 50 0 chr5 174090016 174090056 -25540094 - MER46A DNA MER2_type -81 155 114 * 1203 142 73 93 chr5 174090025 174090056 -25540094 + MER46B DNA MER2_type 1 31 -2700 1930 136 0 0 chr5 174090056 174090320 -25539830 + AluSx SINE Alu 1 264 -48 1203 142 73 93 chr5 174090320 174090577 -25539573 + MER46B DNA MER2_type 31 158 -78 23 0 0 0 chr5 174090677 174090700 -25539450 + AT_rich Low_complexity Low_complexity 1 23 0 349 289 108 24 chr5 174092498 174092682 -25537468 + MIR SINE MIR 18 212 -50 486 210 0 81 chr5 174092710 174092834 -25537316 - MER46C DNA MER2_type -1 337 224 450 178 14 0 chr5 174093144 174093217 -25536933 + FLAM_A SINE Alu 51 124 -18 387 273 151 7 chr5 174093293 174093432 -25536718 - MIR SINE MIR -11 251 93 208 288 99 18 chr5 174094159 174094270 -25535880 + L2 LINE L2 3188 3307 -6 388 304 181 5 chr5 174094271 174094475 -25535675 - MIR SINE MIR 0 262 23 3974 58 20 4 chr5 174094936 174095432 -25534718 + L1PA12 LINE L1 5665 6168 0 182 295 64 51 chr5 174095570 174095648 -25534502 + MIR SINE MIR 37 115 -93 309 256 103 0 chr5 174095724 174095841 -25534309 + MIR SINE MIR 134 262 0 296 287 253 0 chr5 174098548 174098698 -25531452 - MIR SINE MIR 0 262 75 476 346 136 8 chr5 174098777 174099130 -25531020 - L3 LINE CR1 -5 1572 1175 296 270 175 15 chr5 174099173 174099310 -25530840 + L2 LINE L2 3155 3313 0 212 114 23 23 chr5 174099327 174099371 -25530779 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 398 281 153 43 chr5 174099459 174099655 -25530495 - MIR SINE MIR 0 262 34 2208 116 0 7 chr5 174099655 174099958 -25530192 + AluSx SINE Alu 1 301 -11 398 281 153 43 chr5 174099958 174099996 -25530154 - MIR SINE MIR -228 34 2 1671 160 53 20 chr5 174100257 174100441 -25529709 - AluJo SINE Alu -2 310 111 384 22 0 0 chr5 174100441 174100486 -25529664 + (TTA)n Simple_repeat Simple_repeat 1 45 0 1671 160 53 20 chr5 174100486 174100601 -25529549 - AluJo SINE Alu -201 111 1 340 220 23 85 chr5 174102028 174102173 -25527977 + MIR SINE MIR 110 243 -19 412 310 16 0 chr5 174102323 174102452 -25527698 + MER102b DNA MER1_type 71 201 -140 234 137 40 210 chr5 174102612 174102736 -25527414 + MER102b DNA MER1_type 230 332 -9 603 213 12 55 chr5 174104441 174104605 -25525545 - MIR SINE MIR -70 192 36 344 233 44 11 chr5 174104864 174104954 -25525196 + MER81 DNA DNA 17 109 -5 273 302 23 58 chr5 174104971 174105057 -25525093 - L2 LINE L2 -53 3219 3137 204 64 64 21 chr5 174106963 174107010 -25523140 + GA-rich Low_complexity Low_complexity 4 52 0 191 36 36 0 chr5 174107172 174107200 -25522950 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2268 85 0 64 chr5 174107502 174107832 -25522318 + AluSc SINE Alu 1 309 0 195 194 0 0 chr5 174108030 174108066 -25522084 + MIR SINE MIR 111 146 -116 550 284 23 9 chr5 174110308 174110474 -25519676 + MER5A DNA MER1_type 7 186 -3 321 241 0 36 chr5 174110489 174110572 -25519578 - MIR SINE MIR -78 184 105 595 268 79 26 chr5 174114295 174114523 -25515627 - MIR SINE MIR -13 249 10 345 266 36 58 chr5 174115600 174115739 -25514411 - MIR3 SINE MIR -30 178 43 255 360 27 75 chr5 174116121 174116307 -25513843 + MER5A DNA MER1_type 8 184 -5 315 229 0 0 chr5 174116774 174116844 -25513306 + MLT1I LTR MaLR 340 409 0 25 0 0 0 chr5 174116966 174116991 -25513159 + AT_rich Low_complexity Low_complexity 1 25 0 366 143 0 83 chr5 174117587 174117671 -25512479 + L1MB3 LINE L1 6106 6182 -1 340 148 0 16 chr5 174117742 174117803 -25512347 + MIR SINE MIR 80 139 -123 993 188 24 0 chr5 174117834 174117999 -25512151 - FAM SINE Alu -6 169 1 310 250 64 2 chr5 174118083 174118259 -25511891 + MLT1J2 LTR MaLR 42 260 -190 901 214 8 127 chr5 174118263 174118467 -25511683 - MER58A DNA MER1_type -2196 224 54 1899 92 40 0 chr5 174118467 174118717 -25511433 + AluSg SINE Alu 45 304 -6 901 214 8 127 chr5 174118717 174118764 -25511386 - MER58A DNA MER1_type -2366 54 3 385 248 256 0 chr5 174118779 174118904 -25511246 + MLT1J2 LTR MaLR 271 427 -23 2131 113 48 0 chr5 174119232 174119525 -25510625 - AluSq SINE Alu -6 307 1 305 333 34 3 chr5 174119719 174119829 -25510321 - MIR SINE MIR -61 147 34 699 287 62 16 chr5 174120169 174120413 -25509737 - MIR SINE MIR 0 262 8 2280 95 3 0 chr5 174120601 174120897 -25509253 - AluSg SINE Alu -13 297 1 22 70 0 0 chr5 174121426 174121469 -25508681 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 174121496 174121518 -25508632 + AT_rich Low_complexity Low_complexity 1 22 0 339 25 0 0 chr5 174121980 174122020 -25508130 + (CA)n Simple_repeat Simple_repeat 2 41 0 531 272 121 18 chr5 174122465 174122880 -25507270 + L1ME LINE L1 904 1252 -4867 1880 53 41 4 chr5 174122901 174123144 -25507006 - AluY SINE Alu -29 282 31 5701 101 28 46 chr5 174123144 174124558 -25505592 + pTR5 LTR ERV1 743 2295 -143 257 330 10 0 chr5 174124662 174124759 -25505391 + HAL1 LINE L1 1506 1603 -904 1837 209 88 12 chr5 174125142 174125573 -25504577 - MLT1C LTR MaLR -3 464 1 486 167 12 12 chr5 174125636 174125720 -25504430 + Tigger7 DNA MER2_type 1 84 -255 1761 131 15 0 chr5 174125758 174126026 -25504124 + Tigger7 DNA MER2_type 2220 2491 0 1959 133 3 11 chr5 174126070 174126384 -25503766 + AluSx SINE Alu 2 313 0 706 253 40 24 chr5 174126385 174126638 -25503512 + L1ME LINE L1 3645 3901 -2228 340 208 99 10 chr5 174126645 174126746 -25503404 + MIR SINE MIR 139 248 -14 702 221 106 75 chr5 174126770 174126920 -25503230 + L1ME LINE L1 5314 5458 -687 1498 160 91 36 chr5 174126920 174127195 -25502955 + AluJo SINE Alu 1 290 -12 702 221 106 75 chr5 174127195 174127365 -25502785 + L1ME LINE L1 5458 5644 -501 5492 225 48 81 chr5 174127368 174127866 -25502284 - L1M4 LINE L1 -2313 4644 4131 2611 130 90 13 chr5 174127866 174128107 -25502043 - L1MB2 LINE L1 -7 6164 5943 1707 182 24 0 chr5 174128107 174128398 -25501752 - AluSx SINE Alu -14 298 1 2611 130 90 13 chr5 174128398 174128611 -25501539 - L1MB2 LINE L1 -228 5943 5675 5492 225 48 81 chr5 174128611 174130176 -25499974 - L1M4 LINE L1 -2826 4131 2516 1486 135 45 9 chr5 174130176 174130398 -25499752 + MER30 DNA MER1_type 1 230 0 5492 225 48 81 chr5 174130398 174131269 -25498881 - L1M4 LINE L1 -4441 2516 1618 2017 145 16 10 chr5 174131269 174131579 -25498571 - AluSx SINE Alu 0 312 1 5492 225 48 81 chr5 174131579 174131964 -25498186 - L1M4 LINE L1 -5339 1618 1307 270 0 0 0 chr5 174131964 174131994 -25498156 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5492 225 48 81 chr5 174131994 174132265 -25497885 - L1M4 LINE L1 -5650 1307 1029 344 313 117 19 chr5 174132657 174132871 -25497279 - L1M4 LINE L1 -6618 241 7 75 80 0 14 chr5 174132917 174133130 -25497020 + AT_rich Low_complexity Low_complexity 1 210 0 205 123 18 18 chr5 174133215 174133272 -25496878 + (TATAA)n Simple_repeat Simple_repeat 5 61 0 426 283 57 66 chr5 174133429 174133673 -25496477 + L1ME3A LINE L1 5924 6165 -5 588 310 76 35 chr5 174133696 174134064 -25496086 - L2 LINE L2 0 3313 2931 194 335 59 65 chr5 174134137 174134307 -25495843 + L3 LINE CR1 1289 1457 -120 283 180 151 72 chr5 174134818 174134957 -25495193 + LTR67 LTR ERVL 406 555 -2 1141 218 101 39 chr5 174136685 174137071 -25493079 - MER113 DNA MER1_type? -40 481 72 275 266 102 14 chr5 174137180 174137353 -25492797 - MIR3 SINE MIR -6 202 11 4473 134 26 15 chr5 174137535 174138256 -25491894 - L1PB4 LINE L1 -6 6150 5422 2028 226 48 21 chr5 174138317 174138838 -25491312 - L1MC4 LINE L1 -499 7543 7009 1541 54 5 11 chr5 174138966 174139152 -25490998 + L1PA7 LINE L1 5967 6151 -3 1441 182 48 124 chr5 174139153 174139675 -25490475 + L1MC4 LINE L1 7560 8041 -1 28 71 0 0 chr5 174139689 174139745 -25490405 + AT_rich Low_complexity Low_complexity 1 56 0 2193 88 7 3 chr5 174140778 174141082 -25489068 + AluSx SINE Alu 1 305 0 349 289 0 0 chr5 174141117 174141207 -25488943 + L1MC4 LINE L1 6614 6703 -1339 315 322 0 0 chr5 174141127 174141217 -25488933 - L1MC4 LINE L1 -1339 6703 6614 * 381 293 8 32 chr5 174141219 174141342 -25488808 + MIR SINE MIR 26 145 -117 184 316 124 49 chr5 174141433 174141704 -25488446 + L2 LINE L2 2580 2888 -426 942 200 50 15 chr5 174141704 174141904 -25488246 + MER3 DNA MER1_type 2 208 -1 184 316 124 49 chr5 174141904 174142002 -25488148 + L2 LINE L2 2888 2977 -337 307 261 24 103 chr5 174142258 174142291 -25487859 + MER102b DNA MER1_type 39 73 -268 2178 123 0 7 chr5 174142291 174142593 -25487557 - AluSx SINE Alu -12 300 1 307 261 24 103 chr5 174142593 174142724 -25487426 + MER102b DNA MER1_type 73 190 -151 900 159 36 56 chr5 174142755 174142915 -25487235 - MER3 DNA MER1_type -8 201 44 2244 107 6 22 chr5 174142915 174143233 -25486917 - AluSq SINE Alu 0 313 1 900 159 36 56 chr5 174143233 174143267 -25486883 - MER3 DNA MER1_type -165 44 11 418 316 8 0 chr5 174143286 174143403 -25486747 + MER102b DNA MER1_type 213 330 -11 33282 81 13 6 chr5 174143710 174148980 -25481170 + L1PA6 LINE L1 11 5318 -836 222 62 0 0 chr5 174148980 174149012 -25481138 + (CAA)n Simple_repeat Simple_repeat 3 34 0 33282 81 13 6 chr5 174149012 174149856 -25480294 + L1PA6 LINE L1 5318 6154 0 312 237 106 45 chr5 174149876 174150074 -25480076 - MER102b DNA MER1_type -17 324 115 1484 158 23 15 chr5 174150077 174150337 -25479813 - AluJo SINE Alu -16 296 35 279 304 128 0 chr5 174150389 174150491 -25479659 - MER102b DNA MER1_type -226 115 1 313 263 277 0 chr5 174150683 174150820 -25479330 - MER5B DNA MER1_type -2 176 2 476 211 200 0 chr5 174151492 174151672 -25478478 + MIR SINE MIR 1 216 -46 4840 119 49 32 chr5 174151731 174151819 -25478331 + L1MA9 LINE L1 5404 5489 -823 2256 97 3 3 chr5 174151819 174152119 -25478031 + AluSq SINE Alu 1 300 -13 4840 119 49 32 chr5 174152119 174152921 -25477229 + L1MA9 LINE L1 5489 6309 -3 1647 161 37 37 chr5 174153286 174153584 -25476566 - AluJb SINE Alu -14 298 1 7760 186 8 4 chr5 174153660 174153671 -25476479 - L1 LINE L1 -907 5239 5230 4143 102 10 0 chr5 174153671 174154271 -25475879 - L1PB2 LINE L1 -3 6148 5543 7760 186 8 4 chr5 174154271 174155816 -25474334 - L1 LINE L1 -916 5230 3676 365 138 0 17 chr5 174155975 174156033 -25474117 + AluS SINE Alu 7 63 -237 846 141 0 0 chr5 174156034 174156162 -25473988 + AluSg/x SINE Alu 162 289 -21 22 0 0 0 chr5 174156162 174156184 -25473966 + AT_rich Low_complexity Low_complexity 1 22 0 1829 153 10 10 chr5 174156286 174156630 -25473520 - AluJb SINE Alu 0 312 1 22 0 0 0 chr5 174157486 174157508 -25472642 + AT_rich Low_complexity Low_complexity 1 22 0 368 325 148 6 chr5 174157627 174157796 -25472354 + MIR3 SINE MIR 16 208 0 201 329 35 77 chr5 174158133 174158574 -25471576 - MER5A DNA MER1_type -4 185 49 439 255 19 68 chr5 174158153 174158248 -25471902 + MER5B DNA MER1_type 26 111 -67 2251 97 13 3 chr5 174158248 174158547 -25471603 - AluSx SINE Alu -10 302 1 439 255 19 68 chr5 174158547 174158612 -25471538 + MER5B DNA MER1_type 111 178 0 526 265 7 13 chr5 174159006 174159157 -25470993 - Charlie8 DNA MER1_type -2209 208 59 2247 124 3 0 chr5 174159179 174159485 -25470665 + AluSx SINE Alu 1 307 -5 234 235 176 0 chr5 174159734 174159802 -25470348 - L2 LINE L2 -1 3271 3192 254 319 190 0 chr5 174159973 174160089 -25470061 - MIR3 SINE MIR -67 141 4 290 261 11 11 chr5 174160837 174160925 -25469225 + MLT1I LTR MaLR 315 402 -7 252 285 57 89 chr5 174161274 174161397 -25468753 + MER5B DNA MER1_type 60 178 0 371 320 55 39 chr5 174163720 174163901 -25466249 + MER5A DNA MER1_type 6 189 0 2924 9 0 0 chr5 174166583 174166901 -25463249 - AluYb8 SINE Alu 0 318 1 198 0 0 0 chr5 174168402 174168424 -25461726 + (TAA)n Simple_repeat Simple_repeat 1 22 0 21 0 0 0 chr5 174168563 174168584 -25461566 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr5 174168776 174168820 -25461330 + AT_rich Low_complexity Low_complexity 1 44 0 23 54 0 0 chr5 174169528 174169565 -25460585 + AT_rich Low_complexity Low_complexity 1 37 0 565 265 170 41 chr5 174169666 174170077 -25460073 - L1ME LINE L1 -379 5783 5320 333 283 121 48 chr5 174170567 174170666 -25459484 - L1ME LINE L1 -2472 3674 3584 724 162 8 0 chr5 174170666 174170810 -25459340 + FLAM_A SINE Alu 1 145 0 333 283 121 48 chr5 174170810 174171023 -25459127 - L1ME LINE L1 -2562 3584 3338 509 175 0 0 chr5 174171982 174172085 -25458065 + L1MA4 LINE L1 6191 6293 -7 22 0 0 0 chr5 174174231 174174253 -25455897 + AT_rich Low_complexity Low_complexity 1 22 0 1533 208 18 0 chr5 174174430 174174714 -25455436 - AluJo SINE Alu -23 289 1 2097 99 39 0 chr5 174176033 174176316 -25453834 + AluSx SINE Alu 1 294 -18 1333 88 36 16 chr5 174176988 174177181 -25452969 - MER30 DNA MER1_type -33 197 1 649 250 132 18 chr5 174177267 174177495 -25452655 + MIR SINE MIR 8 261 -1 433 243 191 46 chr5 174180099 174180272 -25449878 - MIR SINE MIR -63 199 2 294 248 146 22 chr5 174181446 174181583 -25448567 - L1ME LINE L1 -423 5698 5545 383 328 156 35 chr5 174181722 174182262 -25447888 - L1ME LINE L1 -776 5370 4766 1097 188 83 0 chr5 174182433 174182651 -25447499 + MER46A DNA MER2_type 1 236 0 1014 211 45 14 chr5 174184406 174184708 -25445442 - MER33 DNA MER1_type -13 311 1 1061 159 35 5 chr5 174184714 174184915 -25445235 + L1PB1 LINE L1 5944 6150 -1 363 43 0 0 chr5 174184922 174184969 -25445181 + AluY SINE Alu 250 296 -5 1107 200 23 5 chr5 174187088 174187303 -25442847 + MER20 DNA MER1_type 1 219 0 1283 164 9 0 chr5 174187605 174187819 -25442331 + L1MB5 LINE L1 5945 6160 -14 203 318 159 0 chr5 174188197 174188367 -25441783 - L2 LINE L2 -5 3308 3112 1801 148 19 23 chr5 174189769 174190079 -25440071 + AluJb SINE Alu 3 311 -1 1037 96 0 0 chr5 174190687 174190823 -25439327 + AluSg/x SINE Alu 162 297 -15 2348 95 0 3 chr5 174190824 174191129 -25439021 + AluSq SINE Alu 1 304 -9 2044 118 7 3 chr5 174191164 174191452 -25438698 - AluSg SINE Alu -21 289 1 703 244 42 28 chr5 174191459 174191672 -25438478 + MER20 DNA MER1_type 2 217 -2 2350 71 0 39 chr5 174191926 174192237 -25437913 + AluY SINE Alu 1 299 -12 1433 102 5 5 chr5 174192735 174192931 -25437219 - AluSq SINE Alu -117 196 1 223 192 19 0 chr5 174193074 174193126 -25437024 + T-rich Low_complexity Low_complexity 2 54 0 1316 248 51 17 chr5 174193163 174193518 -25436632 + L1MDa LINE L1 2 368 -6172 2212 203 86 37 chr5 174193519 174193767 -25436383 + MER68 LTR ERV1 1 236 -326 2091 123 29 29 chr5 174193767 174194142 -25436008 + THE1C LTR MaLR 1 375 0 2212 203 86 37 chr5 174194142 174194429 -25435721 + MER68 LTR ERV1 236 562 0 788 286 48 0 chr5 174194429 174194660 -25435490 + L1MDa LINE L1 365 606 -5934 238 277 149 21 chr5 174194660 174194754 -25435396 + LTR8 LTR ERV1 21 126 -565 1272 242 48 9 chr5 174194813 174195148 -25435002 + MER87 LTR ERV1 194 541 0 3574 187 100 42 chr5 174195152 174196213 -25433937 + L1MDa LINE L1 859 1981 -4559 2441 206 13 46 chr5 174196213 174196736 -25433414 + MLT2B3 LTR ERVL 1 506 -48 997 184 13 87 chr5 174196736 174197046 -25433104 + L1MDa LINE L1 2271 2557 -3983 1796 209 41 6 chr5 174197046 174197552 -25432598 + L1MD2 LINE L1 5708 6280 -79 202 207 35 11 chr5 174197573 174197660 -25432490 + (TAA)n Simple_repeat Simple_repeat 3 91 0 1319 206 46 28 chr5 174197791 174198073 -25432077 + AluJb SINE Alu 6 292 -20 1329 223 64 12 chr5 174198473 174198800 -25431350 - MER2 DNA MER2_type 0 344 1 320 244 49 24 chr5 174198834 174198916 -25431234 - L2 LINE L2 0 3313 3230 1932 137 47 33 chr5 174198941 174199300 -25430850 + THE1C LTR MaLR 1 364 -11 297 275 92 63 chr5 174199444 174199651 -25430499 - L2 LINE L2 -1620 1694 1482 595 283 81 41 chr5 174200116 174200622 -25429528 - L1MC/D LINE L1 -297 5824 5292 1443 202 161 6 chr5 174200671 174201012 -25429138 - MLT1F1 LTR MaLR -171 396 3 1963 133 0 0 chr5 174201181 174201459 -25428691 + AluSx SINE Alu 22 299 -13 217 350 39 10 chr5 174205556 174205659 -25424491 + L2 LINE L2 2968 3073 -199 1598 162 107 10 chr5 174205683 174205929 -25424221 - MER44D DNA MER2_type -1882 609 388 1691 147 11 18 chr5 174205929 174206208 -25423942 + AluJo SINE Alu 27 303 -9 1598 162 107 10 chr5 174206208 174206270 -25423880 - MER44D DNA MER2_type -2103 388 1 381 287 30 18 chr5 174206367 174206531 -25423619 + MIR SINE MIR 97 262 0 2225 113 0 25 chr5 174207271 174207590 -25422560 + AluSx SINE Alu 1 311 -1 197 250 0 47 chr5 174208629 174208693 -25421457 + L2 LINE L2 3252 3312 -1 1140 137 64 36 chr5 174209148 174209397 -25420753 + AluJo SINE Alu 3 258 -54 461 87 164 58 chr5 174209619 174209723 -25420427 + AluJb SINE Alu 195 309 -3 608 246 228 15 chr5 174209808 174210009 -25420141 - L2 LINE L2 -1 3312 3155 2042 130 17 13 chr5 174210009 174210309 -25419841 - AluSq SINE Alu -10 303 3 608 246 228 15 chr5 174210309 174210375 -25419775 - L2 LINE L2 -158 3155 2988 304 276 26 20 chr5 174210433 174210585 -25419565 - L1MC4a LINE L1 -1876 5932 5780 234 191 0 0 chr5 174210617 174210664 -25419486 + (TATG)n Simple_repeat Simple_repeat 2 48 0 340 308 209 0 chr5 174211711 174211893 -25418257 - L2 LINE L2 -541 2773 2554 388 237 215 0 chr5 174212283 174212418 -25417732 - MIR SINE MIR -97 165 2 200 274 0 0 chr5 174212927 174212978 -25417172 + (TG)n Simple_repeat Simple_repeat 2 52 0 201 277 15 0 chr5 174220216 174220281 -25409869 + (CA)n Simple_repeat Simple_repeat 2 67 0 186 203 25 38 chr5 174220846 174220925 -25409225 + GA-rich Low_complexity Low_complexity 3 80 0 634 200 21 12 chr5 174220970 174221269 -25408881 + GA-rich Low_complexity Low_complexity 1 301 0 22 0 0 0 chr5 174221538 174221560 -25408590 + GC_rich Low_complexity Low_complexity 1 22 0 275 71 24 0 chr5 174221822 174221864 -25408286 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 261 57 0 0 chr5 174222097 174222132 -25408018 + (T)n Simple_repeat Simple_repeat 1 35 0 312 27 0 0 chr5 174222211 174222248 -25407902 + (A)n Simple_repeat Simple_repeat 1 37 0 181 157 0 39 chr5 174222441 174222492 -25407658 + GA-rich Low_complexity Low_complexity 4 52 0 219 209 22 58 chr5 174223516 174223655 -25406495 + GA-rich Low_complexity Low_complexity 2 135 0 368 237 35 39 chr5 174225558 174225700 -25404450 + MER5A DNA MER1_type 2 141 -42 187 200 22 0 chr5 174226887 174226932 -25403218 - MIR3 SINE MIR -54 154 109 254 279 28 69 chr5 174227136 174227307 -25402843 - MIR SINE MIR -54 208 42 243 0 0 0 chr5 174228614 174228641 -25401509 + (A)n Simple_repeat Simple_repeat 1 27 0 229 320 143 33 chr5 174229255 174229527 -25400623 + L2 LINE L2 2895 3196 -76 436 301 75 29 chr5 174229533 174229772 -25400378 - MIR SINE MIR 0 262 13 238 172 188 0 chr5 174229969 174230033 -25400117 + MIR SINE MIR 66 141 -67 22 0 0 0 chr5 174230250 174230272 -25399878 + AT_rich Low_complexity Low_complexity 1 22 0 2419 90 3 3 chr5 174230445 174230756 -25399394 + AluSq SINE Alu 1 311 -2 975 219 96 65 chr5 174231538 174231935 -25398215 + MLT1I LTR MaLR 1 409 0 2296 113 10 0 chr5 174232287 174232596 -25397554 + AluSx SINE Alu 1 312 0 228 309 24 81 chr5 174232715 174232771 -25397379 + MIR3 SINE MIR 86 133 -75 1124 184 52 143 chr5 174232771 174233178 -25396972 + MLT1A2 LTR MaLR 5 374 0 228 309 24 81 chr5 174233178 174233244 -25396906 + MIR3 SINE MIR 133 201 -7 196 308 113 57 chr5 174235411 174235658 -25394492 + L2 LINE L2 3004 3264 -8 849 224 13 0 chr5 174236118 174236274 -25393876 + MER63A DNA MER1_type 53 210 0 234 322 7 96 chr5 174236326 174236472 -25393678 - L2 LINE L2 -4 3268 3136 295 345 30 30 chr5 174236594 174236794 -25393356 - L2 LINE L2 -526 2788 2589 591 282 76 47 chr5 174237771 174238072 -25392078 + LTR16C LTR ERVL 180 489 -2 607 51 68 0 chr5 174239463 174239580 -25390570 + CT-rich Low_complexity Low_complexity 2 126 0 786 245 5 15 chr5 174242488 174242688 -25387462 + MIR SINE MIR 2 199 -63 204 40 0 0 chr5 174242959 174242984 -25387166 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 297 0 0 0 chr5 174242983 174243016 -25387134 + (CA)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr5 174243772 174243794 -25386356 + AT_rich Low_complexity Low_complexity 1 22 0 394 301 13 58 chr5 174244671 174244827 -25385323 - MIR3 SINE MIR -30 178 30 2308 122 0 3 chr5 174246587 174246899 -25383251 - AluSx SINE Alu 0 312 2 537 276 65 12 chr5 174247080 174247250 -25382900 + MIR3 SINE MIR 5 183 -25 23 33 0 0 chr5 174249681 174249711 -25380439 + AT_rich Low_complexity Low_complexity 1 30 0 372 43 0 0 chr5 174250422 174250468 -25379682 + (CA)n Simple_repeat Simple_repeat 2 47 0 186 43 0 0 chr5 174250612 174250635 -25379515 + (TTA)n Simple_repeat Simple_repeat 3 25 0 212 277 84 84 chr5 174252740 174252895 -25377255 - MIR3 SINE MIR -6 202 48 549 238 0 0 chr5 174253048 174253153 -25376997 + L2 LINE L2 3200 3304 -9 295 310 234 10 chr5 174253311 174253508 -25376642 - MIR SINE MIR -18 244 4 312 211 0 0 chr5 174253628 174253699 -25376451 + (TA)n Simple_repeat Simple_repeat 1 71 0 253 302 108 65 chr5 174253838 174253977 -25376173 + MIR3 SINE MIR 2 146 -62 225 0 0 0 chr5 174254392 174254417 -25375733 + (T)n Simple_repeat Simple_repeat 1 25 0 224 122 24 0 chr5 174254429 174254470 -25375680 + (TG)n Simple_repeat Simple_repeat 2 43 0 246 141 0 0 chr5 174256538 174256587 -25373563 + L1MB7 LINE L1 5212 5260 -886 243 108 0 0 chr5 174256587 174256624 -25373526 + L1MB7 LINE L1 5224 5260 -886 243 108 0 0 chr5 174256624 174256661 -25373489 + L1MB7 LINE L1 5224 5260 -886 3388 183 66 15 chr5 174256661 174257513 -25372637 + L1MB7 LINE L1 5224 6123 -61 1764 148 37 0 chr5 174257534 174257805 -25372345 - AluJb SINE Alu -31 281 1 1531 178 40 27 chr5 174257875 174258173 -25371977 + AluJo SINE Alu 1 302 -10 1239 101 106 5 chr5 174258459 174258666 -25371484 + MER30 DNA MER1_type 2 229 -1 30 72 0 12 chr5 174258941 174258981 -25371169 + AT_rich Low_complexity Low_complexity 1 40 -42 1809 106 0 4 chr5 174258981 174259216 -25370934 + AluSg SINE Alu 1 234 -76 30 72 0 12 chr5 174259216 174259258 -25370892 + AT_rich Low_complexity Low_complexity 40 82 0 1566 171 62 9 chr5 174259452 174259774 -25370376 - MER2 DNA MER2_type 0 345 7 464 277 106 37 chr5 174260091 174260279 -25369871 - MIR SINE MIR -13 249 49 338 241 78 14 chr5 174261050 174261191 -25368959 + L1ME4a LINE L1 5969 6118 -3 1421 57 34 0 chr5 174261762 174261937 -25368213 - AluSq SINE Alu -132 181 1 1521 91 45 18 chr5 174263601 174263822 -25366328 - MER30 DNA MER1_type 0 230 4 809 181 83 7 chr5 174265280 174265424 -25364726 + FRAM SINE Alu 1 155 -21 1689 178 11 7 chr5 174265428 174265745 -25364405 + AluJb SINE Alu 1 318 0 317 348 71 22 chr5 174266003 174266187 -25363963 - L2 LINE L2 -833 2481 2289 668 199 38 2 chr5 174266205 174266439 -25363711 + AluJo SINE Alu 1 280 -32 281 283 38 57 chr5 174266479 174266585 -25363565 - L2 LINE L2 -45 3227 3124 226 320 162 14 chr5 174266770 174266992 -25363158 - L2 LINE L2 -1185 2129 1875 490 132 0 0 chr5 174267511 174267587 -25362563 + FLAM_A SINE Alu 38 113 -29 334 296 102 41 chr5 174267685 174267881 -25362269 + L1MC4a LINE L1 4634 4841 -1305 304 336 108 9 chr5 174267900 174268114 -25362036 + L1MC4a LINE L1 4883 5117 -1029 1046 281 74 30 chr5 174268163 174268536 -25361614 + L1MC4a LINE L1 5212 5153 -993 1222 217 13 0 chr5 174268536 174268771 -25361379 - MER8 DNA MER2_type -1 238 1 1046 281 74 30 chr5 174268771 174268987 -25361163 + L1MC4a LINE L1 5152 5357 -789 313 255 211 53 chr5 174269122 174269330 -25360820 + L1MC4a LINE L1 5878 6118 -1690 192 77 0 0 chr5 174271086 174271112 -25359038 + (T)n Simple_repeat Simple_repeat 1 26 0 2293 112 0 0 chr5 174271988 174272292 -25357858 + AluSg SINE Alu 1 304 -6 23 0 0 0 chr5 174275687 174275710 -25354440 + GC_rich Low_complexity Low_complexity 1 23 0 223 323 8 23 chr5 174276543 174276673 -25353477 + G-rich Low_complexity Low_complexity 2 129 0 240 59 0 0 chr5 174276957 174276991 -25353159 + (CGG)n Simple_repeat Simple_repeat 1 34 0 27 62 0 0 chr5 174277067 174277115 -25353035 + GC_rich Low_complexity Low_complexity 1 48 0 1642 86 10 0 chr5 174278769 174279001 -25351149 - AluSp SINE Alu 0 309 76 387 0 0 0 chr5 174280156 174280199 -25349951 + (TA)n Simple_repeat Simple_repeat 2 44 0 2898 138 57 50 chr5 174280211 174280827 -25349323 - L1MB7 LINE L1 -40 6144 5525 462 276 98 12 chr5 174280852 174281015 -25349135 + MIR SINE MIR 70 246 -16 1140 147 89 0 chr5 174281052 174281243 -25348907 - AluJb SINE Alu -104 208 1 286 289 117 0 chr5 174281558 174281738 -25348412 - L1MC4 LINE L1 -5 8037 7837 623 286 42 55 chr5 174282259 174282643 -25347507 + MLT1K LTR MaLR 199 577 -11 1080 229 96 104 chr5 174282781 174283020 -25347130 - L1ME3A LINE L1 -79 6083 5844 2081 142 20 0 chr5 174283020 174283322 -25346828 - AluSx SINE Alu -4 308 1 1080 229 96 104 chr5 174283322 174284054 -25346096 - L1ME3A LINE L1 -318 5844 5112 431 267 69 35 chr5 174284086 174284318 -25345832 - L1ME3A LINE L1 -1276 4870 4631 1698 176 3 7 chr5 174284437 174284726 -25345424 - AluSx SINE Alu -5 307 20 878 175 11 75 chr5 174286353 174286633 -25343517 + AluSx SINE Alu 38 299 -13 25 0 0 0 chr5 174286947 174286972 -25343178 + AT_rich Low_complexity Low_complexity 1 25 0 968 268 29 4 chr5 174287608 174287851 -25342299 - MIR SINE MIR -10 252 4 2241 108 10 0 chr5 174288021 174288328 -25341822 - AluSx SINE Alu -2 310 1 2586 72 55 3 chr5 174288350 174288696 -25341454 + THE1B LTR MaLR 1 364 0 794 217 116 19 chr5 174288799 174289006 -25341144 + MIR SINE MIR 12 238 -24 1503 205 83 0 chr5 174289011 174289338 -25340812 + MLT1A1 LTR MaLR 1 354 -11 186 329 82 12 chr5 174289426 174289511 -25340639 - L2 LINE L2 -10 3262 3172 2015 141 13 10 chr5 174289774 174290080 -25340070 - AluSx SINE Alu -5 307 1 1174 319 180 21 chr5 174290085 174290809 -25339341 + L2 LINE L2 842 1768 -1546 1699 203 0 7 chr5 174290809 174291109 -25339041 + AluJo SINE Alu 3 300 -12 1174 319 180 21 chr5 174291109 174291380 -25338770 + L2 LINE L2 1768 1995 -1319 2261 126 0 0 chr5 174291380 174291689 -25338461 - AluSq SINE Alu -4 309 1 1465 199 130 40 chr5 174291731 174292153 -25337997 - MLT1C LTR MaLR 0 467 8 644 302 62 4 chr5 174292158 174292400 -25337750 + L2 LINE L2 2017 2272 -1042 1015 230 64 0 chr5 174292428 174292670 -25337480 - MIR SINE MIR -1 261 15 * 1164 280 110 57 chr5 174292661 174293438 -25336712 + L2 LINE L2 2258 2993 -320 2236 103 10 0 chr5 174293438 174293738 -25336412 - AluSx SINE Alu -9 303 1 1164 280 110 57 chr5 174293738 174293812 -25336338 + L2 LINE L2 2993 3062 -251 2132 119 3 3 chr5 174293812 174294115 -25336035 - AluSx SINE Alu -9 303 1 1164 280 110 57 chr5 174294115 174294268 -25335882 + L2 LINE L2 3062 3313 0 449 288 7 41 chr5 174294561 174294707 -25335443 - L2 LINE L2 0 3313 3173 645 246 24 52 chr5 174295412 174295623 -25334527 - MER21B LTR ERV1 -109 754 550 283 103 0 0 chr5 174295623 174295662 -25334488 - THE1B LTR MaLR 0 355 317 686 104 130 0 chr5 174295672 174295787 -25334363 - THE1B LTR MaLR -234 130 1 580 250 69 17 chr5 174295790 174296022 -25334128 - MER21B LTR ERV1 -300 563 320 836 249 163 37 chr5 174296160 174296566 -25333584 - MER21B LTR ERV1 -307 556 100 286 196 0 0 chr5 174296820 174296866 -25333284 + polypyrimidine Low_complexity Low_complexity 4 49 0 2205 113 7 7 chr5 174296869 174297265 -25332885 - AluSc SINE Alu 0 396 1 22 56 0 0 chr5 174298411 174298447 -25331703 + AT_rich Low_complexity Low_complexity 1 36 0 2236 89 7 20 chr5 174298666 174298969 -25331181 + AluSg SINE Alu 7 305 -5 183 42 0 0 chr5 174299328 174299352 -25330798 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 301 309 32 97 chr5 174299457 174299789 -25330361 - L2 LINE L2 -245 3068 2727 386 298 146 0 chr5 174299879 174300050 -25330100 - L2 LINE L2 -576 2738 2543 964 196 28 47 chr5 174300156 174300370 -25329780 - MER63A DNA MER1_type 0 210 1 439 278 117 40 chr5 174301298 174301546 -25328604 - L2 LINE L2 -176 3096 2830 451 215 0 9 chr5 174301559 174301666 -25328484 + MER97c DNA MER1_type? 1 106 -984 202 337 153 31 chr5 174301955 174302281 -25327869 - L2 LINE L2 -904 2410 2045 1050 223 71 95 chr5 174302486 174302907 -25327243 - MLT2B3 LTR ERVL -10 544 134 25104 95 35 11 chr5 174302907 174305407 -25324743 - HERVL-B3 LTR ERVL -1894 3760 1140 2189 109 0 0 chr5 174305407 174305718 -25324432 - AluSx SINE Alu 0 311 1 25104 95 35 11 chr5 174305718 174306887 -25323263 - HERVL-B3 LTR ERVL -4514 1140 1 1920 209 72 52 chr5 174306887 174307427 -25322723 - MLT2B3 LTR ERVL 0 554 4 1303 203 71 14 chr5 174308252 174308533 -25321617 + AluJo SINE Alu 1 297 -15 204 264 38 0 chr5 174308574 174308627 -25321523 + CT-rich Low_complexity Low_complexity 1 55 0 426 292 116 37 chr5 174308733 174308834 -25321316 - L1ME4a LINE L1 -56 6065 5973 189 0 0 0 chr5 174308834 174308855 -25321295 + (CA)n Simple_repeat Simple_repeat 2 22 0 426 292 116 37 chr5 174308855 174309157 -25320993 - L1ME4a LINE L1 -148 5973 5630 1335 144 144 4 chr5 174309189 174309460 -25320690 - MLT1C LTR MaLR -9 458 150 371 333 84 42 chr5 174309460 174309697 -25320453 - L2 LINE L2 -976 2338 2092 297 282 35 29 chr5 174309951 174310125 -25320025 - L1ME3A LINE L1 -221 5949 5775 234 0 0 0 chr5 174310125 174310151 -25319999 + (TTA)n Simple_repeat Simple_repeat 2 27 0 241 125 0 0 chr5 174310151 174310191 -25319959 - MADE1 DNA Mariner -37 43 4 288 255 0 11 chr5 174310194 174310288 -25319862 - L1ME3A LINE L1 -389 5773 5681 1377 263 55 28 chr5 174310384 174310501 -25319649 + L1ME3A LINE L1 4935 5047 -1123 2151 101 3 17 chr5 174310501 174310798 -25319352 - AluSq SINE Alu -20 293 1 1377 263 55 28 chr5 174310798 174311680 -25318470 + L1ME3A LINE L1 5047 5951 -219 215 265 60 12 chr5 174311848 174311931 -25318219 - L2 LINE L2 -194 3078 2992 3548 172 41 37 chr5 174312593 174313716 -25316434 - L1MB7 LINE L1 -16 6168 5047 246 32 0 0 chr5 174314092 174314123 -25316027 + (TC)n Simple_repeat Simple_repeat 2 32 0 1720 166 3 37 chr5 174314123 174314419 -25315731 - AluJo SINE Alu -26 286 1 1931 150 0 13 chr5 174316288 174316595 -25313555 + AluJo SINE Alu 1 303 -9 26 0 0 0 chr5 174317092 174317118 -25313032 + AT_rich Low_complexity Low_complexity 1 26 0 710 203 0 7 chr5 174317183 174317326 -25312824 + MER33 DNA MER1_type 5 146 -178 403 236 65 16 chr5 174317856 174317979 -25312171 - MIR SINE MIR -85 177 49 1054 124 28 17 chr5 174318520 174318577 -25311573 - L1MC1 LINE L1 -9 6324 6269 1883 107 0 15 chr5 174318577 174318849 -25311301 + AluSx SINE Alu 1 268 -44 1054 124 28 17 chr5 174318849 174318969 -25311181 - L1MC1 LINE L1 -64 6269 6145 420 118 88 20 chr5 174318969 174319071 -25311079 + MER33 DNA MER1_type 216 324 0 360 286 101 8 chr5 174319071 174319190 -25310960 + MIR SINE MIR 31 160 -102 1596 109 125 48 chr5 174319195 174319508 -25310642 - MER1B DNA MER1_type 0 337 1 2198 110 0 10 chr5 174320244 174320545 -25309605 + AluSc SINE Alu 1 298 -11 1843 171 0 3 chr5 174320612 174320905 -25309245 - AluJo SINE Alu -20 292 1 282 316 0 0 chr5 174321362 174321441 -25308709 + MLT1K LTR MaLR 185 263 -325 207 270 90 22 chr5 174322084 174322173 -25307977 - MIR SINE MIR -63 145 51 23 33 0 0 chr5 174322893 174322923 -25307227 + AT_rich Low_complexity Low_complexity 1 30 0 34 0 0 0 chr5 174323266 174323300 -25306850 + AT_rich Low_complexity Low_complexity 1 34 0 226 280 147 55 chr5 174324234 174324438 -25305712 - MIR SINE MIR -14 248 5 278 282 10 48 chr5 174325819 174325922 -25304228 - MIR SINE MIR -71 191 93 956 129 8 0 chr5 174326166 174326298 -25303852 + AluSq/x SINE Alu 1 133 -180 1691 173 61 3 chr5 174326302 174326597 -25303553 + AluSx SINE Alu 1 312 0 233 291 23 35 chr5 174327494 174327580 -25302570 - MIR SINE MIR -107 155 71 23 0 0 0 chr5 174328083 174328106 -25302044 + AT_rich Low_complexity Low_complexity 1 23 0 568 270 96 7 chr5 174328255 174328485 -25301665 - MIR SINE MIR 0 262 17 346 297 18 45 chr5 174328806 174328917 -25301233 - MIR SINE MIR -71 137 30 325 301 128 15 chr5 174329008 174329141 -25301009 + L2 LINE L2 2557 2704 -610 290 217 0 60 chr5 174330924 174331007 -25299143 - LTR67 LTR ERVL 0 557 480 319 256 51 0 chr5 174331385 174331463 -25298687 - L2 LINE L2 0 3313 3232 357 303 14 28 chr5 174331926 174332068 -25298082 + MIR SINE MIR 81 220 -42 401 259 18 18 chr5 174332247 174332359 -25297791 - MIR SINE MIR -98 164 53 509 314 20 7 chr5 174332475 174332628 -25297522 + MIR SINE MIR 16 170 -92 477 317 30 0 chr5 174332852 174333051 -25297099 + Charlie8 DNA MER1_type 33 237 -2180 300 304 113 71 chr5 174333953 174333991 -25296159 - MIR3 SINE MIR -17 191 156 687 225 22 22 chr5 174333991 174334169 -25295981 - MER5B DNA MER1_type 0 178 1 300 304 113 71 chr5 174334169 174334298 -25295852 - MIR3 SINE MIR -52 156 17 1192 235 105 25 chr5 174334320 174334526 -25295624 + MER113 DNA MER1_type? 23 211 -310 2188 117 10 7 chr5 174334526 174334834 -25295316 + AluSc SINE Alu 1 309 0 1192 235 105 25 chr5 174334834 174335066 -25295084 + MER113 DNA MER1_type? 211 496 -25 432 0 0 0 chr5 174335566 174335614 -25294536 + (CA)n Simple_repeat Simple_repeat 2 49 0 469 280 0 25 chr5 174336928 174337046 -25293104 - L2 LINE L2 0 3313 3199 302 320 0 0 chr5 174337047 174337122 -25293028 + L2 LINE L2 3188 3262 -10 23 0 0 0 chr5 174337634 174337657 -25292493 + AT_rich Low_complexity Low_complexity 1 23 0 34 55 0 0 chr5 174337850 174337905 -25292245 + AT_rich Low_complexity Low_complexity 1 55 0 492 18 0 0 chr5 174340678 174340735 -25289415 + (TG)n Simple_repeat Simple_repeat 2 58 0 266 274 10 29 chr5 174343914 174344016 -25286134 + CT-rich Low_complexity Low_complexity 3 102 0 292 258 237 0 chr5 174345788 174345881 -25284269 - L2 LINE L2 -2 3311 3197 198 0 0 0 chr5 174346027 174346049 -25284101 + (TG)n Simple_repeat Simple_repeat 2 23 0 1386 253 55 45 chr5 174346264 174346828 -25283322 - L2 LINE L2 -5 3308 2741 237 284 108 10 chr5 174348252 174348354 -25281796 - MIR SINE MIR -23 239 128 898 60 20 20 chr5 174349582 174349731 -25280419 + (TTTC)n Simple_repeat Simple_repeat 1 149 0 1875 135 0 38 chr5 174349731 174350020 -25280130 - AluJb SINE Alu -34 278 1 1950 145 0 3 chr5 174350199 174350482 -25279668 - AluSx SINE Alu -30 282 1 366 393 8 16 chr5 174353086 174353338 -25276812 - MIR SINE MIR -1 261 12 2130 127 3 0 chr5 174353405 174353705 -25276445 + AluSq SINE Alu 1 301 -12 325 315 77 39 chr5 174353734 174353915 -25276235 - MIR SINE MIR -70 192 5 335 23 23 0 chr5 174353939 174353983 -25276167 + (TAGG)n Simple_repeat Simple_repeat 2 46 0 213 65 0 0 chr5 174355135 174355166 -25274984 + (A)n Simple_repeat Simple_repeat 1 31 0 541 281 7 0 chr5 174356695 174356834 -25273316 + L1ME LINE L1 5615 5754 -367 2018 119 3 52 chr5 174357000 174357328 -25272822 - AluSx SINE Alu 0 312 1 377 275 36 51 chr5 174357600 174357738 -25272412 - MIR SINE MIR -55 153 18 597 152 48 40 chr5 174358100 174358225 -25271925 + AluJb SINE Alu 118 243 -69 1045 150 40 0 chr5 174358788 174358961 -25271189 + AluJb SINE Alu 129 308 -4 236 221 29 150 chr5 174359329 174359469 -25270681 + L3 LINE CR1 437 559 -1018 2380 94 3 0 chr5 174361170 174361478 -25268672 + AluSg SINE Alu 1 309 -1 2554 116 5 47 chr5 174361550 174361645 -25268505 + MLT1B LTR MaLR 1 98 -292 1767 152 6 57 chr5 174361645 174361961 -25268189 - AluJb SINE Alu -12 300 1 2554 116 5 47 chr5 174361961 174362269 -25267881 + MLT1B LTR MaLR 98 387 -3 23 0 0 0 chr5 174362293 174362316 -25267834 + AT_rich Low_complexity Low_complexity 1 23 0 281 288 23 30 chr5 174362378 174362510 -25267640 - L2 LINE L2 -14 3299 3169 262 213 120 27 chr5 174363665 174363740 -25266410 - MIR SINE MIR -96 166 85 1546 279 31 43 chr5 174363744 174364260 -25265890 + MLT1J LTR MaLR 2 511 0 424 250 99 33 chr5 174364278 174364430 -25265720 + MIR SINE MIR 84 245 -17 998 221 97 4 chr5 174366117 174366384 -25263766 - MER33 DNA MER1_type -7 317 26 539 238 70 73 chr5 174366417 174366703 -25263447 + MER102b DNA MER1_type 36 320 -21 737 281 53 20 chr5 174367786 174368032 -25262118 - MIR SINE MIR -1 261 8 283 258 31 21 chr5 174369145 174369242 -25260908 + MIR3 SINE MIR 88 185 -23 223 294 106 0 chr5 174369488 174369573 -25260577 + L2 LINE L2 3153 3246 -26 314 321 7 50 chr5 174369839 174369979 -25260171 + L2 LINE L2 3122 3255 -17 234 0 0 0 chr5 174371219 174371245 -25258905 + (A)n Simple_repeat Simple_repeat 1 26 0 359 237 97 0 chr5 174373678 174373792 -25256358 + MARNA DNA Mariner 275 399 -187 240 243 63 90 chr5 174376482 174376593 -25253557 + L2 LINE L2 2971 3078 -194 309 284 102 24 chr5 174376673 174376800 -25253350 - MER5A DNA MER1_type 0 189 53 242 241 156 99 chr5 174377615 174377756 -25252394 - L2 LINE L2 -5 3308 3160 491 222 19 19 chr5 174377771 174377879 -25252271 + L2 LINE L2 3206 3313 0 407 251 171 34 chr5 174377931 174378106 -25252044 - L2 LINE L2 -261 3052 2854 277 286 62 27 chr5 174378196 174378517 -25251633 + L1ME LINE L1 5254 5582 -584 342 266 31 70 chr5 174378802 174378841 -25251309 + L1ME LINE L1 5646 5685 -436 2098 120 3 13 chr5 174378841 174379140 -25251010 + AluSq SINE Alu 1 296 -17 342 266 31 70 chr5 174379140 174379228 -25250922 + L1ME LINE L1 5685 5768 -353 253 337 30 10 chr5 174379506 174379607 -25250543 + L2 LINE L2 3170 3272 0 2075 124 0 3 chr5 174380059 174380368 -25249782 + AluSx SINE Alu 1 308 0 383 250 152 30 chr5 174381391 174381555 -25248595 - MIR SINE MIR -77 185 2 225 154 0 0 chr5 174384276 174384315 -25245835 + GA-rich Low_complexity Low_complexity 2 40 0 34 0 0 0 chr5 174384472 174384506 -25245644 + AT_rich Low_complexity Low_complexity 1 34 0 489 351 12 6 chr5 174384673 174384841 -25245309 + MIR SINE MIR 2 170 -92 7108 22 7 0 chr5 174385404 174386627 -25243523 + L1PA2 LINE L1 4573 5803 -352 1372 20 0 0 chr5 174386727 174386876 -25243274 + L1PA2 LINE L1 6005 6153 -2 257 279 127 0 chr5 174387902 174387981 -25242169 + MIR SINE MIR 58 146 -116 22 0 0 0 chr5 174388710 174388732 -25241418 + AT_rich Low_complexity Low_complexity 1 22 0 350 296 57 40 chr5 174391305 174391481 -25238669 - MIR3 SINE MIR -2 206 28 220 219 0 0 chr5 174391645 174391686 -25238464 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr5 174391917 174391946 -25238204 + AT_rich Low_complexity Low_complexity 1 29 0 331 337 46 29 chr5 174392075 174392295 -25237855 - MIR SINE MIR 0 262 33 216 279 98 47 chr5 174392342 174392586 -25237564 + L2 LINE L2 3015 3311 -2 231 321 0 0 chr5 174443753 174443809 -25186341 - MIR SINE MIR -76 132 77 807 123 0 80 chr5 174444737 174444875 -25185275 - FLAM_C SINE Alu -11 132 6 2242 99 0 0 chr5 174444955 174445259 -25184891 + AluSg SINE Alu 2 305 -5 473 237 9 9 chr5 174445259 174445395 -25184755 + MIR SINE MIR 17 152 -56 188 304 18 18 chr5 174445406 174445462 -25184688 - MER5A DNA MER1_type -4 185 130 626 243 30 24 chr5 174445586 174445755 -25184395 - MER5B DNA MER1_type -4 174 5 277 91 0 23 chr5 174445975 174446019 -25184131 + MER45 DNA AcHobo 1537 1579 -2 229 229 98 0 chr5 174446034 174446095 -25184055 - L2 LINE L2 -498 2816 2750 251 286 111 16 chr5 174446645 174446771 -25183379 + L2 LINE L2 3040 3177 -136 250 264 56 14 chr5 174447860 174447932 -25182218 - MIR SINE MIR -84 124 50 490 307 32 99 chr5 174448194 174448598 -25181552 - L2 LINE L2 0 3272 2896 30 0 0 0 chr5 174448910 174448940 -25181210 + AT_rich Low_complexity Low_complexity 1 30 0 1856 143 3 19 chr5 174448940 174449248 -25180902 + AluJo SINE Alu 1 303 -9 529 264 97 6 chr5 174449272 174449457 -25180693 - MIR SINE MIR -43 219 19 1858 256 122 19 chr5 174449540 174450271 -25179879 + L2 LINE L2 1886 2691 -623 363 285 199 5 chr5 174450300 174450486 -25179664 + MIR SINE MIR 41 262 0 545 279 19 12 chr5 174451098 174451259 -25178891 + MIR SINE MIR 37 198 -64 828 249 106 5 chr5 174451284 174451501 -25178649 + MIR SINE MIR 2 240 -22 2379 122 38 8 chr5 174452150 174452518 -25177632 - MSTA LTR MaLR 0 428 50 534 306 24 12 chr5 174452863 174453033 -25177117 + MIR SINE MIR 79 250 -12 387 262 32 56 chr5 174453262 174453388 -25176762 - L2 LINE L2 0 3313 3191 1045 223 91 3 chr5 174453390 174453686 -25176464 - MER33 DNA MER1_type 0 324 3 4077 107 37 5 chr5 174453739 174454359 -25175791 + L1MA3 LINE L1 5663 6302 -3 1764 197 22 100 chr5 174454496 174454998 -25175152 - MLT1C LTR MaLR -4 463 1 234 167 56 89 chr5 174456303 174456393 -25173757 + MIR SINE MIR 30 116 -146 1991 136 0 7 chr5 174456557 174456844 -25173306 - AluJo SINE Alu -27 285 1 644 191 27 73 chr5 174457410 174457603 -25172547 - MLT1G1 LTR MaLR -415 173 1 235 310 70 0 chr5 174457841 174457941 -25172209 - MIR SINE MIR -65 143 37 239 247 93 31 chr5 174458037 174458134 -25172016 + MIR3 SINE MIR 55 157 -51 1977 224 57 47 chr5 174458256 174458761 -25171389 + L1ME3 LINE L1 5590 6103 -59 1872 168 0 0 chr5 174458761 174459047 -25171103 - AluJb SINE Alu -26 286 1 1977 224 57 47 chr5 174459047 174459100 -25171050 + L1ME3 LINE L1 6103 6154 -8 198 191 21 0 chr5 174459259 174459306 -25170844 + MIR3 SINE MIR 153 200 -8 2659 138 24 5 chr5 174459350 174459769 -25170381 + MSTA LTR MaLR 2 428 0 369 285 210 10 chr5 174459980 174460180 -25169970 + MIR SINE MIR 23 262 0 1862 142 3 17 chr5 174460268 174460583 -25169567 + AluJb SINE Alu 1 311 0 264 366 0 11 chr5 174460655 174460748 -25169402 - MIR SINE MIR -165 97 6 264 345 0 25 chr5 174460837 174460956 -25169194 + MIR SINE MIR 29 144 -118 2091 251 37 29 chr5 174462965 174463555 -25166595 + MLT1G1 LTR MaLR 1 595 0 268 209 45 15 chr5 174465015 174465082 -25165068 + L1ME4a LINE L1 5950 6018 -103 579 230 153 43 chr5 174465558 174465785 -25164365 + MIR SINE MIR 16 262 0 268 340 21 0 chr5 174465949 174466046 -25164104 + L1MC/D LINE L1 5494 5592 -2216 595 294 47 79 chr5 174466321 174466675 -25163475 + L2 LINE L2 2281 2645 -669 225 0 0 0 chr5 174466675 174466700 -25163450 + (TA)n Simple_repeat Simple_repeat 1 25 0 1471 220 4 4 chr5 174466700 174466973 -25163177 - AluJo SINE Alu -38 274 2 595 294 47 79 chr5 174466973 174467062 -25163088 + L2 LINE L2 2643 2711 -603 449 230 126 100 chr5 174467264 174467525 -25162625 + L2 LINE L2 3032 3299 -14 1986 166 73 3 chr5 174468011 174468379 -25161771 + MSTD LTR MaLR 1 394 -2 6491 242 57 27 chr5 174468383 174470067 -25160083 + MSTD-int LTR MaLR 2 1735 0 1823 173 96 8 chr5 174470067 174470431 -25159719 + MSTD LTR MaLR 1 396 0 228 250 117 0 chr5 174470482 174470542 -25159608 + MIR3 SINE MIR 121 187 -21 2222 93 10 7 chr5 174470790 174471091 -25159059 - AluSx SINE Alu -10 302 1 704 234 6 58 chr5 174471132 174471303 -25158847 + MER58A DNA MER1_type 1 162 0 561 267 32 78 chr5 174471303 174471584 -25158566 + PABL_B LTR ERV1 1 268 -399 3785 137 2 0 chr5 174471602 174472155 -25157995 + MER41A LTR ERV1 1 554 0 836 159 31 18 chr5 174472155 174472318 -25157832 + PABL_B LTR ERV1 503 667 0 269 49 49 0 chr5 174472339 174472380 -25157770 + MER58 DNA MER1_type 2374 2416 -4 1596 69 69 9 chr5 174472709 174472952 -25157198 + AluSx SINE Alu 55 310 0 1791 160 16 7 chr5 174473021 174473366 -25156784 - MER61C LTR ERV1 0 434 7 200 222 0 0 chr5 174473734 174473779 -25156371 + T-rich Low_complexity Low_complexity 1 45 0 351 296 42 32 chr5 174474085 174474261 -25155889 + MIR3 SINE MIR 27 200 -8 2138 67 4 0 chr5 174474327 174474596 -25155554 + AluY SINE Alu 37 306 -5 22 35 0 0 chr5 174474702 174474731 -25155419 + AT_rich Low_complexity Low_complexity 1 29 0 1094 244 58 32 chr5 174474734 174475169 -25154981 - L1MC4a LINE L1 -1741 6067 5622 943 176 23 11 chr5 174475197 174475373 -25154777 - AluJo SINE Alu -12 300 123 321 225 47 134 chr5 174475377 174475564 -25154586 - L1MC4a LINE L1 -2213 5595 5438 862 165 0 0 chr5 174475564 174475697 -25154453 - FLAM_A SINE Alu 0 133 1 321 225 47 134 chr5 174475697 174475785 -25154365 - L1MC4a LINE L1 -2370 5438 5344 242 309 34 54 chr5 174476055 174476204 -25153946 + MIR3 SINE MIR 19 164 -44 206 254 0 84 chr5 174476922 174476993 -25153157 + polypurine Low_complexity Low_complexity 4 68 0 1718 225 173 23 chr5 174477627 174478148 -25152002 + MLT1E2 LTR MaLR 1 599 -27 269 220 0 0 chr5 174478314 174478364 -25151786 - L2 LINE L2 0 3313 3264 236 200 0 0 chr5 174478431 174478471 -25151679 - L2 LINE L2 -10 3303 3264 345 258 67 0 chr5 174478602 174478691 -25151459 - MIR SINE MIR -111 151 57 885 109 133 0 chr5 174478714 174478842 -25151308 + AluJb SINE Alu 1 145 -167 2663 116 55 57 chr5 174478847 174479211 -25150939 - L1MB2 LINE L1 -19 6152 5788 1856 156 28 0 chr5 174479211 174479499 -25150651 - AluJb SINE Alu -12 300 5 2663 116 55 57 chr5 174479499 174479660 -25150490 - L1MB2 LINE L1 -383 5788 5628 558 276 167 51 chr5 174479856 174480314 -25149836 + L2 LINE L2 2761 3279 -34 290 269 62 35 chr5 174480321 174480569 -25149581 + L1MC4a LINE L1 5659 5819 -343 3890 125 52 16 chr5 174480630 174481260 -25148890 - MER39B LTR ERV1 0 653 1 413 293 124 22 chr5 174482101 174482326 -25147824 - LTR33 LTR ERVL -248 273 26 21 0 0 0 chr5 174482355 174482376 -25147774 + AT_rich Low_complexity Low_complexity 1 21 0 2276 115 3 0 chr5 174482459 174482754 -25147396 + AluSx SINE Alu 1 296 -16 410 254 30 22 chr5 174482826 174482960 -25147190 - MIR3 SINE MIR -45 163 29 213 302 139 0 chr5 174483376 174483462 -25146688 - L2 LINE L2 -6 3266 3169 530 288 37 5 chr5 174483599 174483790 -25146360 - MIR SINE MIR -64 198 2 364 255 90 90 chr5 174485114 174485302 -25144848 - MIR SINE MIR -1 261 74 2160 122 0 3 chr5 174485559 174485862 -25144288 + AluSx SINE Alu 1 302 -10 556 293 75 38 chr5 174485892 174486158 -25143992 + MLT1J LTR MaLR 233 508 -3 204 246 70 0 chr5 174486774 174486831 -25143319 + MIR SINE MIR 91 151 -111 1898 87 12 0 chr5 174487443 174487685 -25142465 + AluSc SINE Alu 54 298 -11 1550 191 50 13 chr5 174487694 174487993 -25142157 + AluJb SINE Alu 1 310 -2 21 0 0 0 chr5 174488509 174488530 -25141620 + AT_rich Low_complexity Low_complexity 1 21 0 452 291 46 0 chr5 174490121 174490272 -25139878 + MIR SINE MIR 17 174 -88 2473 89 0 0 chr5 174490495 174490799 -25139351 - AluSq SINE Alu -5 308 5 2316 80 3 26 chr5 174491351 174491664 -25138486 + AluSp SINE Alu 1 306 -7 180 189 27 0 chr5 174492164 174492201 -25137949 + L2 LINE L2 3198 3235 -37 1045 252 103 55 chr5 174492366 174493007 -25137143 + L2 LINE L2 2633 3309 -4 481 329 24 9 chr5 174493166 174493379 -25136771 - MIR SINE MIR -1 261 46 351 332 30 50 chr5 174493700 174493962 -25136188 + Charlie8 DNA MER1_type 20 276 -2141 303 167 244 11 chr5 174494203 174494293 -25135857 + MIR SINE MIR 47 157 -105 1564 210 90 3 chr5 174494306 174494640 -25135510 - MLT1A1 LTR MaLR -2 363 1 2254 229 29 21 chr5 174494695 174495210 -25134940 + LTR53 LTR ERVL 1 519 0 237 257 55 55 chr5 174495298 174495407 -25134743 - MIR SINE MIR -46 216 108 289 315 64 35 chr5 174495466 174495669 -25134481 - MIR SINE MIR -46 216 8 2695 123 39 10 chr5 174495932 174496348 -25133802 - MSTA LTR MaLR 0 428 1 2393 96 0 0 chr5 174496580 174496882 -25133268 + AluSc SINE Alu 1 302 -7 210 182 18 0 chr5 174497203 174497258 -25132892 + (TA)n Simple_repeat Simple_repeat 1 56 0 2309 168 20 34 chr5 174497258 174497572 -25132578 - Tigger2a DNA MER2_type -2274 434 126 2518 135 3 3 chr5 174497572 174497936 -25132214 + THE1B LTR MaLR 1 364 0 2309 168 20 34 chr5 174497936 174498061 -25132089 - Tigger2a DNA MER2_type -2582 126 1 1922 261 108 78 chr5 174498133 174498709 -25131441 + L1MC/D LINE L1 200 757 -5666 2342 149 10 25 chr5 174498709 174499105 -25131045 - MLT1B LTR MaLR 0 390 1 1922 261 108 78 chr5 174499105 174499701 -25130449 + L1MC/D LINE L1 757 1408 -5015 4055 199 54 29 chr5 174499707 174500814 -25129336 + L1MC/D LINE L1 5079 6229 -743 1712 250 29 11 chr5 174500828 174501276 -25128874 + L1PB4 LINE L1 11 466 -6383 6433 245 27 52 chr5 174501626 174503313 -25126837 + L1PB4 LINE L1 1067 2794 -4055 1802 168 55 0 chr5 174503313 174503604 -25126546 + AluJb SINE Alu 1 307 -5 2150 134 0 10 chr5 174503606 174503912 -25126238 + AluSx SINE Alu 1 303 -9 6433 245 27 52 chr5 174503912 174504100 -25126050 + L1PB4 LINE L1 2795 2899 -3950 10955 192 46 10 chr5 174504112 174505260 -25124890 - L1PB2 LINE L1 -4 6863 5758 1506 131 22 9 chr5 174505260 174505489 -25124661 - AluSc SINE Alu -9 300 69 10955 192 46 10 chr5 174505489 174505696 -25124454 - L1PB2 LINE L1 -1109 5758 5560 1448 117 31 123 chr5 174505696 174506035 -25124115 - AluYb8 SINE Alu 0 310 1 10955 192 46 10 chr5 174506035 174506434 -25123716 - L1PB2 LINE L1 -1307 5560 5177 207 0 0 0 chr5 174506434 174506457 -25123693 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 10955 192 46 10 chr5 174506457 174508117 -25122033 - L1PB2 LINE L1 -1690 5177 3314 3425 82 30 60 chr5 174508117 174508655 -25121495 + MER11A LTR ERVK 1 522 -744 7295 187 38 8 chr5 174508755 174512065 -25118085 - L1PB2 LINE L1 -4392 2471 3 7358 204 15 6 chr5 174512094 174513652 -25116498 + L1PB4 LINE L1 2915 4487 -2361 1113 226 0 0 chr5 174513657 174513856 -25116294 + AluJo SINE Alu 3 201 -111 1981 189 108 31 chr5 174513856 174514311 -25115839 - LTR2B LTR ERV1 0 490 1 47489 66 10 5 chr5 174514311 174521084 -25109066 - Harlequin LTR ERV1 0 6896 1 1350 159 24 16 chr5 174521084 174521335 -25108815 - LTR2B LTR ERV1 0 490 238 654 234 39 49 chr5 174521437 174521642 -25108508 - LTR2 LTR ERV1 -246 203 1 600 190 0 26 chr5 174521642 174521758 -25108392 + AluJo SINE Alu 198 310 -2 7140 176 23 34 chr5 174521760 174522475 -25107675 + L1PB4 LINE L1 4517 5238 -1620 2146 134 0 0 chr5 174522475 174522767 -25107383 - AluSx SINE Alu -20 292 1 7140 176 23 34 chr5 174522767 174524430 -25105720 + L1PB4 LINE L1 5238 6858 0 2314 161 70 5 chr5 174524422 174524837 -25105313 + L1MC1 LINE L1 5427 5868 -465 * 546 214 0 0 chr5 174524895 174524998 -25105152 + L1MD1 LINE L1 6130 6232 -10 193 230 230 35 chr5 174525733 174525820 -25104330 + MIR SINE MIR 51 154 -108 262 293 0 0 chr5 174525916 174525974 -25104176 - MER113 DNA MER1_type? 0 521 464 1926 142 0 10 chr5 174526123 174526439 -25103711 + AluSx SINE Alu 1 313 0 2484 95 27 41 chr5 174526797 174526875 -25103275 - L1PB2 LINE L1 0 6151 6073 2473 67 10 0 chr5 174526875 174527173 -25102977 - AluY SINE Alu -10 301 1 2484 95 27 41 chr5 174527173 174527461 -25102689 - L1PB2 LINE L1 -78 6073 5790 2039 131 13 16 chr5 174527539 174527845 -25102305 - AluSx SINE Alu -7 305 1 205 200 40 0 chr5 174528525 174528575 -25101575 + MIR SINE MIR 99 150 -112 282 167 42 0 chr5 174528613 174528661 -25101489 - MLT1K LTR MaLR -2 586 537 371 304 31 58 chr5 174528857 174529081 -25101069 - MLT1K LTR MaLR -236 352 135 827 308 24 8 chr5 174529811 174530061 -25100089 + MIR SINE MIR 1 254 -8 311 233 47 0 chr5 174530408 174530494 -25099656 + MLT1I LTR MaLR 318 407 -2 343 339 8 16 chr5 174530923 174531044 -25099106 - MIR SINE MIR -109 153 34 1586 272 31 41 chr5 174531062 174531625 -25098525 - L2 LINE L2 -14 3299 2744 803 278 50 55 chr5 174531911 174532100 -25098050 + L1ME3A LINE L1 4556 4744 -1426 2358 103 0 0 chr5 174532100 174532402 -25097748 + AluSx SINE Alu 1 302 -10 803 278 50 55 chr5 174532402 174532736 -25097414 + L1ME3A LINE L1 4744 5078 -1092 1661 148 56 3 chr5 174532736 174533020 -25097130 - AluJo SINE Alu -1 311 13 803 278 50 55 chr5 174533020 174533574 -25096576 + L1ME3A LINE L1 5078 5655 -515 1722 189 0 3 chr5 174533574 174533865 -25096285 + AluJo SINE Alu 21 310 -2 803 278 50 55 chr5 174533865 174534004 -25096146 + L1ME3A LINE L1 5655 5793 -377 1118 246 5 104 chr5 174534006 174534392 -25095758 - MER69 DNA AcHobo -878 348 1 578 263 35 40 chr5 174534392 174534590 -25095560 + L1ME3A LINE L1 5960 6156 -14 521 226 2 19 chr5 174534605 174534749 -25095401 + L1MA9 LINE L1 6159 6291 0 415 225 12 0 chr5 174534926 174535006 -25095144 + MER33 DNA MER1_type 2 82 -242 4558 236 49 32 chr5 174535006 174536363 -25093787 + L1M4 LINE L1 2865 4244 -1902 1243 204 13 183 chr5 174536397 174536644 -25093506 - MLT2B2 LTR ERVL -3 512 431 4975 190 30 1 chr5 174536644 174537355 -25092795 - L1PA5 LINE L1 -6 6148 5418 1243 204 13 183 chr5 174537355 174537724 -25092426 - MLT2B2 LTR ERVL -84 431 1 2853 201 36 8 chr5 174537724 174538370 -25091780 + L1M4 LINE L1 4286 4949 -1197 296 271 8 45 chr5 174538365 174538498 -25091652 + L1MB8 LINE L1 5936 6063 -115 * 1824 159 0 7 chr5 174538499 174538782 -25091368 + AluJo SINE Alu 9 289 -23 31 26 0 0 chr5 174538782 174538820 -25091330 + AT_rich Low_complexity Low_complexity 1 38 0 624 124 21 0 chr5 174538906 174539003 -25091147 + L1MB8 LINE L1 6074 6172 -6 977 148 57 5 chr5 174539029 174539238 -25090912 + MER33 DNA MER1_type 144 363 0 301 270 124 15 chr5 174539283 174539420 -25090730 + MIR SINE MIR 111 262 0 23 33 0 0 chr5 174539487 174539517 -25090633 + AT_rich Low_complexity Low_complexity 1 30 0 250 250 0 15 chr5 174539745 174539813 -25090337 - MIR3 SINE MIR -50 158 92 184 281 22 79 chr5 174540217 174540306 -25089844 - MIR SINE MIR -71 191 108 1041 163 104 42 chr5 174540414 174540654 -25089496 - AluJo SINE Alu -8 304 50 457 197 88 15 chr5 174540662 174540799 -25089351 + MER113 DNA MER1_type? 87 233 -288 627 215 0 68 chr5 174540803 174540966 -25089184 + MER5B DNA MER1_type 26 177 -1 656 234 87 60 chr5 174540970 174541069 -25089081 + MER113 DNA MER1_type? 250 345 -176 2470 64 0 0 chr5 174541069 174541365 -25088785 + AluY SINE Alu 1 296 -15 656 234 87 60 chr5 174541365 174541530 -25088620 + MER113 DNA MER1_type? 345 521 0 314 304 54 49 chr5 174542339 174542523 -25087627 + L2 LINE L2 2884 3068 -204 200 217 160 28 chr5 174542560 174542666 -25087484 - MIR SINE MIR 0 262 143 * 501 259 99 6 chr5 174542661 174542823 -25087327 + MIR SINE MIR 58 234 -28 2714 201 87 64 chr5 174542879 174543687 -25086463 + LTR1B LTR ERV1 1 826 0 278 219 31 0 chr5 174543688 174543752 -25086398 - MIR SINE MIR -111 151 86 2897 207 30 9 chr5 174544585 174545156 -25084994 + MER119 DNA MER1_type 1 583 0 358 259 428 6 chr5 174545364 174545677 -25084473 + L2 LINE L2 2851 3295 -18 270 292 0 11 chr5 174545850 174545939 -25084211 + MIR SINE MIR 56 143 -119 547 305 16 5 chr5 174546863 174547053 -25083097 + MIR SINE MIR 49 240 -22 224 335 95 72 chr5 174547083 174547346 -25082804 + L2 LINE L2 2988 3256 -16 2513 48 0 3 chr5 174547371 174547665 -25082485 + AluY SINE Alu 1 293 -18 26 0 0 0 chr5 174547767 174547793 -25082357 + AT_rich Low_complexity Low_complexity 1 26 0 627 271 36 18 chr5 174547832 174547998 -25082152 - MIR SINE MIR -73 189 21 2014 148 3 10 chr5 174548498 174548808 -25081342 - AluJb SINE Alu -3 309 2 549 44 0 0 chr5 174548865 174548933 -25081217 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 3132 173 105 33 chr5 174549806 174550481 -25079669 - LTR8A LTR ERV1 -2 725 2 440 216 48 0 chr5 174550830 174550955 -25079195 - L1ME4a LINE L1 -1 6120 5990 324 156 0 0 chr5 174550968 174551013 -25079137 - LTR1B-int LTR ERV1 -7159 46 2 2261 205 113 78 chr5 174551084 174551869 -25078281 - LTR1B LTR ERV1 -13 813 1 3747 136 42 42 chr5 174551869 174551971 -25078179 - MER50 LTR ERV1 -74 660 559 2234 93 23 10 chr5 174551971 174552273 -25077877 + AluSx SINE Alu 1 306 -6 3747 136 42 42 chr5 174552273 174552830 -25077320 - MER50 LTR ERV1 -174 560 1 3636 159 38 5 chr5 174553037 174553639 -25076511 - LTR26E LTR ERV1 0 622 1 233 294 0 0 chr5 174553978 174554046 -25076104 + L1MC/D LINE L1 5858 5925 -1883 304 253 132 58 chr5 174554610 174554784 -25075366 + MER5A DNA MER1_type 2 188 -1 577 197 228 21 chr5 174555073 174555266 -25074884 - MIR SINE MIR -12 250 18 287 311 0 22 chr5 174558215 174558305 -25071845 - L2 LINE L2 -49 3223 3136 327 265 189 15 chr5 174558384 174558516 -25071634 - MIR SINE MIR -36 226 72 391 270 79 84 chr5 174559315 174559493 -25070657 - MIR SINE MIR -61 201 25 905 214 33 0 chr5 174560109 174560291 -25069859 + MER5A DNA MER1_type 1 188 -1 362 293 28 19 chr5 174560659 174560765 -25069385 + MIR3 SINE MIR 78 184 -24 180 294 0 0 chr5 174560958 174561026 -25069124 + CT-rich Low_complexity Low_complexity 2 69 0 428 272 85 47 chr5 174561528 174561767 -25068383 + MIR SINE MIR 10 262 0 807 214 16 11 chr5 174562039 174562221 -25067929 - MIR SINE MIR -62 200 18 323 358 34 58 chr5 174562217 174562544 -25067606 + L3b LINE CR1 1252 1570 -13 * 589 279 16 26 chr5 174563046 174563236 -25066914 - MIR SINE MIR -62 200 13 593 264 114 0 chr5 174563236 174563403 -25066747 - MER5A DNA MER1_type -2 187 2 219 36 0 0 chr5 174563689 174563717 -25066433 + (TAA)n Simple_repeat Simple_repeat 1 28 0 728 234 90 70 chr5 174563838 174564094 -25066056 - MIR SINE MIR 0 262 2 314 299 51 43 chr5 174564343 174564460 -25065690 - L2 LINE L2 -6 3266 3149 298 267 68 53 chr5 174566157 174566363 -25063787 + L1ME4a LINE L1 5757 5965 -156 254 212 40 0 chr5 174566366 174566465 -25063685 + (TA)n Simple_repeat Simple_repeat 1 103 0 1762 173 3 25 chr5 174566508 174566826 -25063324 + AluJo SINE Alu 1 311 -1 481 259 66 41 chr5 174567550 174567747 -25062403 - MIR SINE MIR -13 249 48 376 241 46 19 chr5 174568088 174568196 -25061954 - L2 LINE L2 -234 3079 2969 295 292 92 17 chr5 174568286 174568406 -25061744 + L2 LINE L2 3180 3308 -5 1994 163 58 3 chr5 174569173 174569498 -25060652 - MER7A DNA MER2_type -4 342 2 217 297 17 25 chr5 174569498 174569616 -25060534 - MIR SINE MIR -11 251 135 485 289 40 7 chr5 174569773 174569925 -25060225 - MIR SINE MIR -99 163 7 731 245 66 10 chr5 174570428 174570624 -25059526 - MIR SINE MIR -16 246 40 352 284 37 18 chr5 174571264 174571373 -25058777 - L2 LINE L2 0 3313 3203 315 299 61 37 chr5 174571372 174571536 -25058614 - L2 LINE L2 -458 2856 2689 * 21 71 0 0 chr5 174571951 174571993 -25058157 + AT_rich Low_complexity Low_complexity 1 42 0 1382 151 0 5 chr5 174572402 174572614 -25057536 + AluJo SINE Alu 83 293 -19 186 43 0 0 chr5 174572965 174572988 -25057162 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 258 239 28 28 chr5 174574332 174574403 -25055747 + MIR SINE MIR 30 100 -108 242 300 14 0 chr5 174574499 174574569 -25055581 + MLT1J LTR MaLR 103 173 -338 * 372 261 108 73 chr5 174574540 174574752 -25055398 + MLT1L LTR MaLR 211 439 -176 2259 127 0 6 chr5 174574752 174575066 -25055084 + AluSx SINE Alu 1 312 0 372 261 108 73 chr5 174575066 174575167 -25054983 + MLT1L LTR MaLR 439 535 -80 944 102 7 0 chr5 174575189 174575326 -25054824 - L1MB3 LINE L1 0 6183 6046 235 193 70 18 chr5 174575681 174575738 -25054412 - MIR SINE MIR -86 176 117 189 194 0 0 chr5 174576043 174576079 -25054071 + L2 LINE L2 3219 3254 -18 * 738 227 32 16 chr5 174576074 174576259 -25053891 + MIR SINE MIR 56 243 -19 23 0 0 0 chr5 174577101 174577124 -25053026 + GC_rich Low_complexity Low_complexity 1 23 0 455 249 110 17 chr5 174577464 174577637 -25052513 + MIR SINE MIR 8 196 -66 629 73 0 128 chr5 174577654 174577763 -25052387 - FRAM SINE Alu -43 133 39 360 277 76 0 chr5 174578426 174578545 -25051605 - MIR3 SINE MIR -67 141 14 3041 225 32 15 chr5 174578587 174579370 -25050780 - L1MC4a LINE L1 0 7808 7013 628 268 142 49 chr5 174579893 174580259 -25049891 - L2 LINE L2 -3 3310 2911 706 130 7 68 chr5 174580458 174580604 -25049546 + LTR52 LTR ERVL 1 137 -284 417 191 148 52 chr5 174580645 174580760 -25049390 + MER33 DNA MER1_type 1 126 -198 1002 207 56 0 chr5 174580761 174580974 -25049176 + AluJo SINE Alu 87 311 -1 357 114 179 93 chr5 174580976 174581020 -25049130 + MER33 DNA MER1_type 117 156 -2429 2117 104 0 7 chr5 174581020 174581328 -25048822 + AluSq SINE Alu 2 307 0 357 114 179 93 chr5 174581328 174581422 -25048728 + MER33 DNA MER1_type 156 268 -56 806 145 38 15 chr5 174581425 174581556 -25048594 - AluJo SINE Alu -178 134 1 24 0 0 0 chr5 174581558 174581582 -25048568 + AT_rich Low_complexity Low_complexity 1 24 0 1086 241 114 35 chr5 174581880 174582282 -25047868 + MER57B LTR ERV1 1 434 0 1082 227 85 72 chr5 174583078 174583731 -25046419 + LTR48 LTR ERV1 1 644 0 2713 156 6 39 chr5 174583889 174584063 -25046087 - L1MB8 LINE L1 0 6178 6000 2825 157 14 0 chr5 174584063 174584483 -25045667 + MSTB LTR MaLR 1 426 0 2713 156 6 39 chr5 174584483 174584821 -25045329 - L1MB8 LINE L1 -178 6000 5683 828 79 0 0 chr5 174585043 174585194 -25044956 - AluSp/q SINE Alu 0 333 183 3180 136 29 50 chr5 174585194 174585753 -25044397 + LTR10A LTR ERV1 1 547 -62 1310 151 5 0 chr5 174585767 174585952 -25044198 - AluSx SINE Alu -126 186 1 2845 174 57 21 chr5 174585981 174586546 -25043604 - MER34C LTR ERV1 0 585 1 31 44 0 0 chr5 174586577 174586622 -25043528 + AT_rich Low_complexity Low_complexity 1 45 0 22 35 0 0 chr5 174586833 174586862 -25043288 + AT_rich Low_complexity Low_complexity 1 29 0 4049 158 27 22 chr5 174586862 174587575 -25042575 - LTR39 LTR ERV1 -60 723 8 2299 133 28 19 chr5 174588172 174588533 -25041617 + THE1B LTR MaLR 1 364 0 12397 101 8 0 chr5 174588533 174590101 -25040049 + THE1B-int LTR MaLR 1 1580 0 2362 124 22 40 chr5 174590101 174590396 -25039754 + THE1B LTR MaLR 1 289 -75 2452 79 0 3 chr5 174590396 174590699 -25039451 - AluSp SINE Alu -11 302 1 2362 124 22 40 chr5 174590699 174590774 -25039376 + THE1B LTR MaLR 289 364 0 340 309 103 0 chr5 174591256 174591353 -25038797 + L2 LINE L2 3153 3259 -13 297 214 29 79 chr5 174591383 174591523 -25038627 + L1MC/D LINE L1 5672 5804 -2004 528 285 77 36 chr5 174591809 174591943 -25038207 - MIR SINE MIR -11 251 103 2149 230 66 33 chr5 174591943 174592517 -25037633 + MLT1E LTR MaLR 1 593 0 528 285 77 36 chr5 174592517 174592603 -25037547 - MIR SINE MIR -159 103 22 2198 95 3 10 chr5 174593135 174593429 -25036721 - AluY SINE Alu -19 292 1 330 255 0 78 chr5 174594015 174594131 -25036019 + L1ME4a LINE L1 1169 6036 -82 3500 157 119 6 chr5 174594208 174594840 -25035310 + MER39 LTR ERV1 1 703 -4 1619 87 24 0 chr5 174594965 174595173 -25034977 - L1PA7 LINE L1 -1 6153 5941 10565 79 1 0 chr5 174595173 174596558 -25033592 + L1P LINE L1 3416 4802 -1344 873 104 0 0 chr5 174596542 174596667 -25033483 + L1P LINE L1 3322 3446 -2700 * 266 365 0 0 chr5 174597401 174597497 -25032653 + L2 LINE L2 3155 3250 -22 571 303 22 39 chr5 174597571 174597660 -25032490 + L2 LINE L2 2625 2714 -600 748 151 8 16 chr5 174597660 174597786 -25032364 + L1MB8 LINE L1 6054 6178 0 571 303 22 39 chr5 174597786 174597927 -25032223 + L2 LINE L2 2714 2851 -463 379 293 293 0 chr5 174598056 174598319 -25031831 + L2 LINE L2 2967 3306 -7 208 278 0 0 chr5 174598987 174599041 -25031109 - MIR SINE MIR -67 141 88 3192 144 57 27 chr5 174599746 174600341 -25029809 + L1MA7 LINE L1 5675 6287 -4 25 65 0 0 chr5 174601443 174601489 -25028661 + AT_rich Low_complexity Low_complexity 1 46 0 432 0 0 0 chr5 174602569 174602617 -25027533 + (TG)n Simple_repeat Simple_repeat 1 48 0 22 0 0 0 chr5 174602725 174602747 -25027403 + AT_rich Low_complexity Low_complexity 1 22 0 974 172 167 18 chr5 174603028 174603255 -25026895 - MIR SINE MIR 0 262 2 205 294 50 50 chr5 174603565 174603684 -25026466 + MIR SINE MIR 68 186 -76 322 265 0 0 chr5 174603936 174604019 -25026131 + L1ME4a LINE L1 5963 6045 -76 345 232 92 7 chr5 174605026 174605168 -25024982 - L1ME4a LINE L1 -174 5947 5794 241 301 0 0 chr5 174605387 174605460 -25024690 + L1ME4a LINE L1 5967 6039 -82 356 232 85 38 chr5 174605607 174605818 -25024332 + L1MC5 LINE L1 7709 7929 -32 1859 154 4 0 chr5 174607212 174607491 -25022659 + AluJb SINE Alu 1 280 -32 371 305 68 51 chr5 174608545 174608722 -25021428 + MIR3 SINE MIR 27 206 -2 2171 106 0 3 chr5 174608942 174609254 -25020896 + AluSg SINE Alu 1 311 0 33 0 0 0 chr5 174609839 174609872 -25020278 + AT_rich Low_complexity Low_complexity 1 33 0 279 218 88 59 chr5 174611103 174611273 -25018877 - L1ME4a LINE L1 -234 5887 5713 1060 169 0 6 chr5 174611504 174611676 -25018474 - AluSg/x SINE Alu -8 302 132 242 291 51 38 chr5 174611696 174611775 -25018375 + L2 LINE L2 3171 3250 -22 2445 62 7 7 chr5 174612103 174612411 -25017739 + AluY SINE Alu 1 308 -3 315 0 0 0 chr5 174613945 174613980 -25016170 + (TG)n Simple_repeat Simple_repeat 1 35 0 623 288 85 9 chr5 174614227 174614439 -25015711 - MIR SINE MIR -15 247 20 23 0 0 0 chr5 174614467 174614490 -25015660 + AT_rich Low_complexity Low_complexity 1 23 0 803 113 7 78 chr5 174615262 174615404 -25014746 + FLAM_C SINE Alu 1 132 -1 21 0 0 0 chr5 174616194 174616215 -25013935 + AT_rich Low_complexity Low_complexity 1 21 0 1709 171 24 7 chr5 174616337 174616635 -25013515 - AluJo SINE Alu -9 303 1 26 50 0 0 chr5 174616708 174616748 -25013402 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 174616807 174616830 -25013320 + AT_rich Low_complexity Low_complexity 1 23 0 306 203 195 8 chr5 174616939 174617057 -25013093 + L1ME4a LINE L1 5978 6117 -4 192 125 0 0 chr5 174617091 174617123 -25013027 + (A)n Simple_repeat Simple_repeat 1 32 0 31 68 0 0 chr5 174618652 174618711 -25011439 + AT_rich Low_complexity Low_complexity 1 59 0 1116 203 42 29 chr5 174619306 174619547 -25010603 + MIR SINE MIR 14 257 -5 262 271 32 131 chr5 174619564 174619803 -25010347 - MIR SINE MIR -17 245 36 2521 107 3 6 chr5 174619858 174620214 -25009936 - THE1A LTR MaLR 0 355 1 12056 89 1 0 chr5 174620214 174621793 -25008357 - THE1A-int LTR MaLR 0 1580 1 2114 104 14 44 chr5 174621794 174621831 -25008319 - THE1A LTR MaLR -1 354 317 744 185 0 15 chr5 174621831 174621966 -25008184 + FLAM_C SINE Alu 1 133 0 2114 104 14 44 chr5 174621966 174622293 -25007857 - THE1A LTR MaLR -38 317 1 451 213 219 62 chr5 174622997 174623157 -25006993 + MER5A DNA MER1_type 2 186 -3 276 255 115 17 chr5 174623585 174623752 -25006398 + MIR SINE MIR 33 212 -50 302 267 138 0 chr5 174623811 174623927 -25006223 - MIR SINE MIR -65 197 66 23 0 0 0 chr5 174625496 174625519 -25004631 + AT_rich Low_complexity Low_complexity 1 23 0 16584 98 7 16 chr5 174625654 174626931 -25003219 - HERVL-B3 LTR ERVL -3228 2426 1179 2189 109 0 0 chr5 174626931 174627242 -25002908 - AluSx SINE Alu 0 311 1 16584 98 7 16 chr5 174627242 174628411 -25001739 - HERVL-B3 LTR ERVL -4475 1179 1 1962 208 72 50 chr5 174628411 174628950 -25001200 - MLT2B3 LTR ERVL 0 554 4 1303 203 71 14 chr5 174629775 174630056 -25000094 + AluJo SINE Alu 1 297 -15 204 264 38 0 chr5 174630097 174630150 -25000000 + CT-rich Low_complexity Low_complexity 1 55 0 426 292 116 37 chr5 174630256 174630357 -24999793 - L1ME4a LINE L1 -56 6065 5973 261 0 0 0 chr5 174630357 174630386 -24999764 + (CA)n Simple_repeat Simple_repeat 2 30 0 426 292 116 37 chr5 174630386 174630688 -24999462 - L1ME4a LINE L1 -148 5973 5630 1335 144 144 4 chr5 174630720 174630991 -24999159 - MLT1C LTR MaLR -9 458 150 380 332 90 41 chr5 174630991 174631235 -24998915 - L2 LINE L2 -976 2338 2083 307 278 34 28 chr5 174631482 174631658 -24998492 - L1ME3A LINE L1 -221 5949 5773 288 0 0 0 chr5 174631659 174631691 -24998459 + (TTA)n Simple_repeat Simple_repeat 2 33 0 241 125 0 0 chr5 174631691 174631731 -24998419 - MADE1 DNA Mariner -37 43 4 288 255 0 11 chr5 174631734 174631828 -24998322 - L1ME3A LINE L1 -389 5773 5681 1377 263 55 28 chr5 174631924 174632041 -24998109 + L1ME3A LINE L1 4935 5047 -1123 2162 98 3 17 chr5 174632041 174632338 -24997812 - AluSq SINE Alu -20 293 1 1377 263 55 28 chr5 174632338 174633220 -24996930 + L1ME3A LINE L1 5047 5951 -219 215 265 60 12 chr5 174633388 174633471 -24996679 - L2 LINE L2 -194 3078 2992 3517 174 41 34 chr5 174634133 174635257 -24994893 - L1MB7 LINE L1 -16 6168 5047 246 32 0 0 chr5 174635633 174635664 -24994486 + (TC)n Simple_repeat Simple_repeat 2 32 0 1693 169 3 37 chr5 174635664 174635960 -24994190 - AluJo SINE Alu -26 286 1 1919 153 0 13 chr5 174637829 174638136 -24992014 + AluJo SINE Alu 1 303 -9 26 0 0 0 chr5 174638633 174638659 -24991491 + AT_rich Low_complexity Low_complexity 1 26 0 710 203 0 7 chr5 174638724 174638867 -24991283 + MER33 DNA MER1_type 5 146 -178 403 236 65 16 chr5 174639397 174639520 -24990630 - MIR SINE MIR -85 177 49 1054 124 28 17 chr5 174640061 174640118 -24990032 - L1MC1 LINE L1 -9 6324 6269 1883 107 0 15 chr5 174640118 174640390 -24989760 + AluSx SINE Alu 1 268 -44 1054 124 28 17 chr5 174640390 174640510 -24989640 - L1MC1 LINE L1 -64 6269 6145 420 118 88 20 chr5 174640510 174640612 -24989538 + MER33 DNA MER1_type 255 363 0 367 286 101 8 chr5 174640612 174640731 -24989419 + MIR SINE MIR 31 160 -102 1596 109 125 48 chr5 174640736 174641049 -24989101 - MER1B DNA MER1_type 0 337 1 1173 98 0 18 chr5 174641785 174641948 -24988202 + AluSg SINE Alu 1 160 -150 26 0 0 0 chr5 174642048 174642074 -24988076 + AT_rich Low_complexity Low_complexity 1 26 0 1843 171 0 3 chr5 174642127 174642420 -24987730 - AluJo SINE Alu -20 292 1 282 316 0 0 chr5 174642877 174642956 -24987194 + MLT1K LTR MaLR 185 263 -325 207 270 90 22 chr5 174643599 174643688 -24986462 - MIR SINE MIR -63 145 51 2193 98 3 3 chr5 174644426 174644721 -24985429 - AluSq SINE Alu -18 295 1 223 192 19 0 chr5 174644864 174644916 -24985234 + T-rich Low_complexity Low_complexity 2 54 0 1212 243 50 18 chr5 174644966 174645308 -24984842 + L1MDa LINE L1 16 368 -6172 2032 203 86 37 chr5 174645309 174645557 -24984593 + MER68 LTR ERV1 1 236 -326 2098 123 29 29 chr5 174645557 174645932 -24984218 + THE1C LTR MaLR 1 375 0 2032 203 86 37 chr5 174645932 174646219 -24983931 + MER68 LTR ERV1 236 562 0 710 286 48 0 chr5 174646219 174646450 -24983700 + L1MDa LINE L1 365 606 -5934 1185 239 48 9 chr5 174646603 174646938 -24983212 + MER87 LTR ERV1 194 541 0 3276 187 100 42 chr5 174646942 174648003 -24982147 + L1MDa LINE L1 859 1981 -4559 2267 206 13 46 chr5 174648003 174648526 -24981624 + MLT2B3 LTR ERVL 1 506 -48 923 184 13 87 chr5 174648526 174648836 -24981314 + L1MDa LINE L1 2271 2557 -3983 1671 209 41 6 chr5 174648836 174649342 -24980808 + L1MD2 LINE L1 5708 6280 -79 202 207 35 11 chr5 174649363 174649450 -24980700 + (TAA)n Simple_repeat Simple_repeat 3 91 0 1347 206 46 28 chr5 174649581 174649863 -24980287 + AluJb SINE Alu 6 292 -20 1268 226 64 9 chr5 174650263 174650590 -24979560 - MER2 DNA MER2_type 0 345 1 317 244 49 24 chr5 174650624 174650706 -24979444 - L2 LINE L2 0 3313 3230 1778 134 47 33 chr5 174650731 174651090 -24979060 + THE1C LTR MaLR 1 364 -11 339 279 210 54 chr5 174651234 174651624 -24978526 - L2 LINE L2 -1620 1694 1244 204 40 0 0 chr5 174653279 174653304 -24976846 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 1641 139 69 10 chr5 174653689 174653992 -24976158 + Tigger1 DNA MER2_type 2098 2418 0 1597 154 10 71 chr5 174654522 174654833 -24975317 - AluJo SINE Alu -20 292 1 498 220 0 9 chr5 174655158 174655267 -24974883 - AluJb SINE Alu -204 108 1 2148 128 0 0 chr5 174655419 174655709 -24974441 - AluSx SINE Alu -22 290 1 2371 112 3 0 chr5 174655715 174656027 -24974123 - AluSp SINE Alu 0 313 1 1142 68 0 0 chr5 174656027 174656159 -24973991 - AluSq/x SINE Alu -178 135 4 527 257 95 0 chr5 174656523 174656671 -24973479 - MIR SINE MIR -78 184 23 237 196 36 0 chr5 174656672 174656728 -24973422 + L1 LINE L1 5191 5248 -898 2065 109 7 7 chr5 174656851 174657134 -24973016 - AluSx SINE Alu -29 283 1 265 290 29 0 chr5 174657564 174657633 -24972517 - MIR SINE MIR -6 256 186 1633 145 91 14 chr5 174658978 174659254 -24970896 + AluJo SINE Alu 1 297 -15 225 0 0 0 chr5 174659302 174659327 -24970823 + (A)n Simple_repeat Simple_repeat 1 25 0 1592 157 108 0 chr5 174660063 174660331 -24969819 + AluJb SINE Alu 1 297 -15 1077 115 26 42 chr5 174660331 174660513 -24969637 - L1 LINE L1 -1407 4739 4559 663 65 97 0 chr5 174661150 174661243 -24968907 - AluSq/x SINE Alu -210 103 2 665 215 45 6 chr5 174661250 174661427 -24968723 - L1M4 LINE L1 -1034 5112 4929 1791 109 113 7 chr5 174661433 174661708 -24968442 - AluSg1 SINE Alu -5 304 1 311 0 0 25 chr5 174661710 174661750 -24968400 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2194 100 7 0 chr5 174661750 174662031 -24968119 - AluSx SINE Alu -29 283 1 265 267 13 13 chr5 174662036 174662111 -24968039 - L2 LINE L2 -13 3259 3185 1547 124 5 0 chr5 174662530 174662747 -24967403 + AluSq SINE Alu 1 218 -95 192 77 0 0 chr5 174662761 174662787 -24967363 + (A)n Simple_repeat Simple_repeat 1 26 0 230 171 0 0 chr5 174662791 174662832 -24967318 - MIR SINE MIR -110 152 112 1586 145 50 34 chr5 174662893 174663155 -24966995 - AluJb SINE Alu -45 267 2 312 48 0 0 chr5 174663165 174663207 -24966943 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1292 102 37 33 chr5 174663379 174663594 -24966556 - Tigger1 DNA MER2_type -1620 798 583 * 2859 164 9 0 chr5 174663584 174664036 -24966114 - Tigger1 DNA MER2_type -1962 456 1 653 281 98 58 chr5 174665573 174666253 -24963897 + L2 LINE L2 2374 3087 -226 1368 170 118 66 chr5 174666253 174666600 -24963550 - MLT1A1 LTR MaLR 0 365 1 190 265 0 41 chr5 174666867 174666916 -24963234 - MER5A DNA MER1_type 0 189 143 1941 161 52 3 chr5 174667032 174667380 -24962770 + MLT1A1 LTR MaLR 1 365 0 2485 71 0 0 chr5 174668779 174669074 -24961076 - AluSg SINE Alu -15 295 1 228 234 0 0 chr5 174670832 174670879 -24959271 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 1686 165 54 7 chr5 174671868 174672165 -24957985 + AluJo SINE Alu 1 311 -1 572 186 93 58 chr5 174673051 174673223 -24956927 + MER5A DNA MER1_type 8 185 -4 362 135 0 0 chr5 174676168 174676220 -24953930 - Alu SINE Alu -7 294 243 1471 169 27 37 chr5 174676244 174676558 -24953592 - AluJb SINE Alu 0 312 1 447 82 66 0 chr5 174676675 174676736 -24953414 - U6 snRNA snRNA -42 65 1 1922 143 18 3 chr5 174677810 174678096 -24952054 - AluSc SINE Alu -19 290 1 4280 113 24 6 chr5 174678098 174678729 -24951421 - Tigger1 DNA MER2_type -938 1480 839 1540 100 14 9 chr5 174678893 174679113 -24951037 - AluSx SINE Alu -91 221 1 863 141 0 15 chr5 174679173 174679308 -24950842 - FLAM_C SINE Alu 0 133 1 2139 100 21 0 chr5 174679370 174679676 -24950474 - AluSq SINE Alu 0 312 1 198 0 0 0 chr5 174680004 174680026 -24950124 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1003 80 0 0 chr5 174680032 174680157 -24949993 - AluSg/x SINE Alu -31 279 155 1747 146 0 8 chr5 174680159 174680427 -24949723 + AluJb SINE Alu 30 295 -17 2226 119 0 7 chr5 174680504 174680814 -24949336 + AluSx SINE Alu 1 308 -4 1514 161 52 46 chr5 174680943 174681248 -24948902 + AluJo SINE Alu 1 307 -5 628 112 0 0 chr5 174681251 174681340 -24948810 + AluY SINE Alu 2 90 -221 260 241 35 0 chr5 174681822 174681880 -24948270 - L2 LINE L2 -8 3264 3205 229 211 158 0 chr5 174682532 174682589 -24947561 - MIR SINE MIR -140 122 57 2328 106 0 0 chr5 174682870 174683171 -24946979 + AluY SINE Alu 1 301 -10 243 246 35 0 chr5 174683188 174683245 -24946905 + MIR3 SINE MIR 100 158 -50 334 238 12 12 chr5 174683331 174683411 -24946739 - MER117 DNA MER1_type -104 93 14 409 289 80 49 chr5 174683521 174683609 -24946541 + MIR SINE MIR 19 103 -159 2062 128 6 34 chr5 174683609 174683930 -24946220 - AluSx SINE Alu 0 312 1 409 289 80 49 chr5 174683930 174684066 -24946084 + MIR SINE MIR 103 250 -12 293 253 107 0 chr5 174684181 174684256 -24945894 - L2 LINE L2 -51 3221 3139 666 165 76 57 chr5 174684361 174684519 -24945631 + MER20 DNA MER1_type 18 178 -41 2323 89 13 3 chr5 174684522 174684824 -24945326 + AluSq SINE Alu 1 305 -8 1522 94 14 9 chr5 174685138 174685350 -24944800 - AluSg SINE Alu -96 214 2 380 194 15 0 chr5 174685354 174685421 -24944729 - MER81 DNA DNA -36 78 11 2132 101 4 0 chr5 174685800 174686117 -24944033 - AluSp SINE Alu 0 322 5 625 183 0 0 chr5 174686184 174686288 -24943862 + FLAM_A SINE Alu 6 109 -33 1899 154 0 7 chr5 174686290 174686615 -24943535 - AluSq SINE Alu 0 323 1 726 248 275 19 chr5 174687239 174687865 -24942285 - L1MC4 LINE L1 -34 8008 7223 601 208 143 90 chr5 174687879 174688033 -24942117 - AluJo SINE Alu -1 311 167 1961 103 62 3 chr5 174688033 174688323 -24941827 - AluSq SINE Alu -6 307 1 2158 120 3 0 chr5 174688326 174688626 -24941524 - AluSq SINE Alu -12 301 1 601 208 143 90 chr5 174688626 174688746 -24941404 - AluJo SINE Alu -146 166 18 2245 151 99 62 chr5 174688773 174689091 -24941059 - L1MB2 LINE L1 -1 6170 5820 2058 142 3 0 chr5 174689091 174689386 -24940764 - AluSx SINE Alu -16 296 1 2245 151 99 62 chr5 174689386 174689635 -24940515 - L1MB2 LINE L1 -351 5820 5582 938 109 0 29 chr5 174689833 174689970 -24940180 - FLAM_C SINE Alu 0 133 1 1022 63 0 0 chr5 174690012 174690139 -24940011 - AluSp/q SINE Alu -2 311 185 1419 183 50 0 chr5 174690239 174690290 -24939860 - Tigger3(Golem) DNA MER2_type -2754 275 228 2125 134 7 7 chr5 174690290 174690597 -24939553 - AluSx SINE Alu -5 307 1 1419 183 50 0 chr5 174690597 174690807 -24939343 - Tigger3(Golem) DNA MER2_type -2801 228 1 477 211 9 9 chr5 174690807 174690916 -24939234 - L1MB4 LINE L1 -58 6122 6014 2141 134 0 0 chr5 174690916 174691214 -24938936 - AluSx SINE Alu -14 298 1 509 312 27 5 chr5 174691381 174691567 -24938583 - MIR3 SINE MIR -18 190 1 1226 173 34 0 chr5 174692383 174692591 -24937559 + AluJb SINE Alu 85 299 -13 4139 152 5 2 chr5 174693219 174693852 -24936298 - MER41B LTR ERV1 0 635 1 22 0 0 0 chr5 174693855 174693877 -24936273 + AT_rich Low_complexity Low_complexity 1 22 0 576 211 38 72 chr5 174694602 174694729 -24935421 + MER33 DNA MER1_type 21 140 -2445 1821 154 3 16 chr5 174694729 174695035 -24935115 + AluJb SINE Alu 1 302 -10 576 211 38 72 chr5 174695035 174695116 -24935034 + MER33 DNA MER1_type 140 222 -102 2137 89 3 54 chr5 174695116 174695431 -24934719 + AluSx SINE Alu 1 299 -13 2324 104 10 0 chr5 174695433 174695740 -24934410 + AluSx SINE Alu 1 310 -2 2113 143 0 3 chr5 174695770 174696070 -24934080 + AluSx SINE Alu 1 299 -13 194 212 242 0 chr5 174696093 174696159 -24933991 - MIR SINE MIR -98 164 83 2428 54 0 0 chr5 174696206 174696565 -24933585 - AluY SINE Alu 0 360 2 2196 94 52 0 chr5 174696569 174696855 -24933295 - AluSx SINE Alu -11 301 1 2244 95 17 10 chr5 174696857 174697151 -24932999 - AluSq SINE Alu -17 296 1 1689 91 0 0 chr5 174697449 174697658 -24932492 + AluSg/x SINE Alu 83 291 -19 1513 184 65 16 chr5 174697765 174698075 -24932075 + MER58B DNA MER1_type 9 333 -8 21 0 0 0 chr5 174698367 174698388 -24931762 + AT_rich Low_complexity Low_complexity 1 21 0 1765 144 23 4 chr5 174698492 174698755 -24931395 + AluSx SINE Alu 1 268 -44 558 178 10 20 chr5 174698755 174698856 -24931294 + AluJo/FRAM SINE Alu 192 291 -21 2385 85 3 0 chr5 174698862 174699157 -24930993 + AluSx SINE Alu 1 296 -16 1855 171 13 0 chr5 174699324 174699622 -24930528 - AluJb SINE Alu -10 302 1 358 82 0 0 chr5 174700545 174700594 -24929556 - Alu SINE Alu -259 49 1 1928 103 40 11 chr5 174702621 174702894 -24927256 - AluSx SINE Alu -11 301 21 510 17 0 0 chr5 174702999 174703058 -24927092 + (CA)n Simple_repeat Simple_repeat 1 59 0 326 91 18 0 chr5 174703058 174703113 -24927037 + (TC)n Simple_repeat Simple_repeat 1 56 0 428 138 31 0 chr5 174703202 174703267 -24926883 - AluSc SINE Alu -115 194 128 2304 113 0 0 chr5 174703267 174703577 -24926573 - AluSg SINE Alu 0 310 1 862 322 62 23 chr5 174703597 174704081 -24926069 + L2 LINE L2 1706 2208 -1106 372 156 0 156 chr5 174704081 174704209 -24925941 + L1MA8 LINE L1 6179 6286 -5 2296 107 0 0 chr5 174704268 174704559 -24925591 + AluSg SINE Alu 1 291 -19 1304 309 60 14 chr5 174704676 174705226 -24924924 + L2 LINE L2 2237 2811 -503 486 283 166 21 chr5 174705281 174705606 -24924544 + L2 LINE L2 2942 3313 0 2224 113 0 25 chr5 174705670 174705990 -24924160 - AluSx SINE Alu 0 312 1 2312 93 0 3 chr5 174705990 174706281 -24923869 - AluSx SINE Alu -22 290 1 857 164 0 8 chr5 174706283 174706417 -24923733 - AluJo/FLAM SINE Alu -179 133 1 2152 97 19 16 chr5 174706523 174706832 -24923318 - AluSg SINE Alu 0 310 1 382 141 28 28 chr5 174706832 174706903 -24923247 - AluJb SINE Alu -157 145 75 1042 107 0 27 chr5 174706903 174707053 -24923097 - AluSg/x SINE Alu -8 304 159 1860 156 0 19 chr5 174707480 174707795 -24922355 - AluJo SINE Alu -3 309 1 937 111 0 16 chr5 174708276 174708402 -24921748 - FLAM_C SINE Alu -19 124 1 1794 122 31 38 chr5 174708684 174708972 -24921178 - AluJb SINE Alu -20 292 7 260 213 0 111 chr5 174709316 174709707 -24920443 + MARNA DNA Mariner 374 469 -117 2151 102 18 0 chr5 174709376 174709660 -24920490 - AluSx SINE Alu -23 289 1 256 231 154 108 chr5 174709660 174709759 -24920391 - MARNA DNA Mariner -430 156 48 2141 133 0 0 chr5 174709789 174710083 -24920067 - AluSx SINE Alu -18 294 1 617 231 98 102 chr5 174710590 174710915 -24919235 + Charlie1b DNA MER1_type 1 324 -199 1409 158 54 47 chr5 174710935 174711214 -24918936 - AluJo SINE Alu -21 291 11 780 242 44 66 chr5 174711437 174711710 -24918440 - AluJo SINE Alu -44 268 2 362 179 0 0 chr5 174712026 174712082 -24918068 + AluSp SINE Alu 137 192 -111 922 70 9 0 chr5 174712082 174712196 -24917954 - AluSq/x SINE Alu -198 115 1 1576 192 21 10 chr5 174712280 174712571 -24917579 - AluJo SINE Alu -18 294 1 2117 133 0 0 chr5 174712688 174712989 -24917161 + AluSx SINE Alu 1 301 -11 2421 89 0 0 chr5 174713002 174713304 -24916846 + AluSg SINE Alu 1 302 -8 292 167 0 0 chr5 174713508 174713550 -24916600 + Alu SINE Alu 1 42 -261 1387 102 6 0 chr5 174713584 174713780 -24916370 + AluSq SINE Alu 107 303 0 1957 152 0 7 chr5 174714076 174714373 -24915777 + AluJb SINE Alu 1 295 -17 592 263 121 26 chr5 174714443 174714675 -24915475 + MIR SINE MIR 9 262 0 2824 10 0 0 chr5 174716344 174716644 -24913506 - AluY SINE Alu -11 300 1 2256 83 10 3 chr5 174717277 174717567 -24912583 + AluSq SINE Alu 11 302 -11 1491 66 42 87 chr5 174718092 174718333 -24911817 + AluSc SINE Alu 79 308 -1 611 102 0 0 chr5 174718455 174718543 -24911607 + AluSg/x SINE Alu 214 301 -9 349 307 98 20 chr5 174719020 174719173 -24910977 + MIR SINE MIR 66 230 -32 2195 118 3 10 chr5 174719569 174719875 -24910275 - AluSx SINE Alu -8 304 1 1878 134 67 0 chr5 174720485 174720769 -24909381 + AluSq SINE Alu 1 303 -10 26 30 0 0 chr5 174720822 174720855 -24909295 + AT_rich Low_complexity Low_complexity 1 33 0 738 177 8 0 chr5 174721603 174721727 -24908423 - FLAM_C SINE Alu -8 125 1 2148 141 0 0 chr5 174721734 174722033 -24908117 - AluSx SINE Alu -13 299 1 419 15 59 0 chr5 174722522 174722590 -24907560 + (TA)n Simple_repeat Simple_repeat 2 73 0 316 264 115 0 chr5 174722590 174722733 -24907417 + L1MC5 LINE L1 7415 7574 -387 2233 115 0 10 chr5 174722767 174723071 -24907079 - AluSx SINE Alu -11 301 1 2200 89 7 10 chr5 174723071 174723227 -24906923 - AluSq SINE Alu -22 291 135 2192 124 0 3 chr5 174723227 174723533 -24906617 - AluSg SINE Alu -5 305 1 2200 89 7 10 chr5 174723533 174723668 -24906482 - AluSq SINE Alu -178 135 1 2237 100 3 3 chr5 174723956 174724245 -24905905 + AluSc SINE Alu 6 294 -15 905 150 0 0 chr5 174724358 174724485 -24905665 + AluSq/x SINE Alu 3 129 -183 1451 150 12 12 chr5 174724489 174724736 -24905414 + AluYb8 SINE Alu 5 251 -67 2388 83 7 0 chr5 174724736 174725025 -24905125 + AluY SINE Alu 10 301 -10 1765 159 11 7 chr5 174725051 174725334 -24904816 + AluJo SINE Alu 11 294 -18 1905 173 3 0 chr5 174725336 174725642 -24904508 + AluSx SINE Alu 1 307 -5 197 306 82 0 chr5 174725657 174725742 -24904408 + L2 LINE L2 3155 3246 -26 258 56 0 0 chr5 174725755 174725791 -24904359 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 1141 184 0 0 chr5 174726027 174726206 -24903944 + AluJb SINE Alu 1 179 -133 210 91 0 0 chr5 174726480 174726513 -24903637 + (TTC)n Simple_repeat Simple_repeat 2 34 0 959 179 183 8 chr5 174727007 174727270 -24902880 - L1MD3 LINE L1 -10 7985 7677 1116 190 9 9 chr5 174727282 174727498 -24902652 - AluJo SINE Alu -48 264 49 1754 133 3 66 chr5 174727595 174727766 -24902384 - AluJo SINE Alu -24 288 143 2321 113 3 0 chr5 174727766 174728075 -24902075 - AluSx SINE Alu -2 310 1 1754 133 3 66 chr5 174728075 174728205 -24901945 - AluJo SINE Alu -169 143 6 484 231 77 0 chr5 174728492 174728638 -24901512 - FLAM_A SINE Alu 0 158 5 369 286 51 57 chr5 174728943 174729118 -24901032 + L1ME3 LINE L1 5979 6152 -10 * 1903 260 99 47 chr5 174729116 174729765 -24900385 - L1MEc LINE L1 -3563 2652 2038 2014 158 3 3 chr5 174729765 174730076 -24900074 - AluJb SINE Alu -1 311 1 1903 260 99 47 chr5 174730076 174730765 -24899385 - L1MEc LINE L1 -4177 2038 1269 2474 80 0 0 chr5 174730765 174731065 -24899085 + AluY SINE Alu 1 300 -11 1903 260 99 47 chr5 174731065 174731228 -24898922 - L1MEc LINE L1 -4946 1269 1116 1568 186 41 7 chr5 174731230 174731521 -24898629 - AluJb SINE Alu -11 301 1 23 33 0 0 chr5 174731608 174731638 -24898512 + AT_rich Low_complexity Low_complexity 1 30 0 376 241 88 50 chr5 174731760 174732107 -24898043 + L1MC5 LINE L1 6351 6703 -1105 1442 196 33 23 chr5 174732107 174732408 -24897742 + AluJb SINE Alu 1 304 -8 376 241 88 50 chr5 174732408 174732445 -24897705 + L1MC5 LINE L1 6703 6737 -1071 525 300 27 13 chr5 174732517 174732667 -24897483 - MER115 DNA AcHobo -409 284 133 1958 151 0 7 chr5 174734090 174734389 -24895761 + AluSx SINE Alu 13 309 -3 1434 213 45 7 chr5 174734468 174734755 -24895395 + AluJo SINE Alu 1 298 -14 2406 84 0 37 chr5 174735451 174735772 -24894378 - AluSc SINE Alu 0 309 1 1153 179 270 3 chr5 174736258 174736554 -24893596 - THE1C LTR MaLR 0 375 1 955 214 0 0 chr5 174736718 174736877 -24893273 + FAM SINE Alu 1 159 -16 21 0 0 0 chr5 174736877 174736898 -24893252 + AT_rich Low_complexity Low_complexity 1 21 0 507 255 73 25 chr5 174737333 174737537 -24892613 - MIR SINE MIR 0 262 49 227 104 21 0 chr5 174738170 174738218 -24891932 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 527 224 8 0 chr5 174738218 174738343 -24891807 + Charlie5 DNA MER1_type 2460 2585 -27 1615 119 0 0 chr5 174738364 174738574 -24891576 + AluSq SINE Alu 1 210 -103 198 0 0 0 chr5 174738588 174738610 -24891540 + (A)n Simple_repeat Simple_repeat 1 22 0 1440 184 0 81 chr5 174738653 174738793 -24891357 + AluJo SINE Alu 1 102 -210 2309 100 0 0 chr5 174738793 174739082 -24891068 - AluSq SINE Alu -23 290 2 1440 184 0 81 chr5 174739082 174739262 -24890888 + AluJo SINE Alu 102 295 -17 1591 174 99 0 chr5 174739488 174739799 -24890351 + AluJo SINE Alu 1 339 0 1998 145 0 3 chr5 174739847 174740137 -24890013 - AluSx SINE Alu -23 289 1 2189 99 7 10 chr5 174740491 174740794 -24889356 + AluSx SINE Alu 1 302 -10 201 295 152 9 chr5 174741498 174741603 -24888547 + MIR SINE MIR 20 139 -123 469 175 0 12 chr5 174741783 174741863 -24888287 + AluJb SINE Alu 2 80 -232 395 112 0 9 chr5 174741864 174742044 -24888106 + AluSx SINE Alu 1 248 -52 1143 157 14 37 chr5 174742044 174742261 -24887889 + AluJb SINE Alu 85 296 -16 343 129 40 105 chr5 174742283 174742407 -24887743 + L1ME4a LINE L1 5988 6103 -18 1356 145 35 93 chr5 174743772 174744082 -24886068 - AluJo SINE Alu -20 292 1 189 107 0 0 chr5 174746531 174746559 -24883591 + (TA)n Simple_repeat Simple_repeat 2 29 0 327 279 47 0 chr5 174746559 174746645 -24883505 + L1MC4 LINE L1 6614 6703 -1339 301 196 0 0 chr5 174746597 174746653 -24883497 - L1MC4 LINE L1 -1339 6703 6648 * 2595 64 0 3 chr5 174749361 174749673 -24880477 + AluY SINE Alu 1 311 0 372 212 92 49 chr5 174749705 174749889 -24880261 + MER112 DNA MER1_type 68 259 -1 2066 142 23 3 chr5 174750284 174750587 -24879563 - AluJb SINE Alu -3 309 1 550 268 110 7 chr5 174751489 174751814 -24878336 - LTR16B LTR ERVL 0 464 72 181 267 0 0 chr5 174752846 174752891 -24877259 + L3 LINE CR1 1397 1441 -136 1716 158 7 7 chr5 174752974 174753247 -24876903 - AluJo SINE Alu -39 273 1 754 190 0 0 chr5 174753552 174753673 -24876477 - FLAM_C SINE Alu -21 122 2 2333 103 0 0 chr5 174753699 174754001 -24876149 - AluSx SINE Alu -10 302 1 470 256 0 8 chr5 174754002 174754119 -24876031 + MIR SINE MIR 121 236 -26 378 298 53 47 chr5 174754154 174754325 -24875825 - MIR SINE MIR -70 192 21 187 235 0 0 chr5 174754591 174754642 -24875508 - MIR SINE MIR -13 249 199 319 240 185 59 chr5 174754651 174755011 -24875139 - MLT1K LTR MaLR -8 580 144 188 188 156 31 chr5 174755169 174755233 -24874917 - MIR SINE MIR -108 154 83 2144 127 0 0 chr5 174755235 174755527 -24874623 + AluSx SINE Alu 1 292 -20 36 0 0 0 chr5 174755530 174755566 -24874584 + AT_rich Low_complexity Low_complexity 1 36 0 1710 157 41 0 chr5 174755579 174755847 -24874303 + AluJo SINE Alu 2 280 -32 285 335 30 75 chr5 174756394 174756725 -24873425 + L2 LINE L2 2871 3186 -86 4116 124 19 9 chr5 174756854 174757483 -24872667 + MER41B LTR ERV1 1 635 0 401 251 108 39 chr5 174757703 174757967 -24872183 - MER34 LTR ERV1 -4 751 353 289 224 0 82 chr5 174758182 174758280 -24871870 - MLT1K LTR MaLR -88 500 411 961 237 171 43 chr5 174758309 174758684 -24871466 - MLT1K LTR MaLR -162 426 4 1554 195 3 17 chr5 174759501 174759803 -24870347 + AluJo SINE Alu 7 304 -8 2094 128 0 3 chr5 174759805 174760111 -24870039 + AluSg1 SINE Alu 3 307 -2 345 271 109 92 chr5 174760131 174760437 -24869713 + Charlie8 DNA MER1_type 3 321 -2096 2135 120 0 0 chr5 174760437 174760737 -24869413 - AluSx SINE Alu -12 300 1 345 271 109 92 chr5 174760737 174760899 -24869251 + Charlie8 DNA MER1_type 321 479 -1938 788 179 0 0 chr5 174761162 174761285 -24868865 + FLAM_A SINE Alu 1 123 -10 2179 131 0 0 chr5 174761303 174761615 -24868535 + AluSx SINE Alu 1 312 0 2090 109 3 0 chr5 174761626 174761920 -24868230 + AluSg SINE Alu 6 300 -10 273 310 127 7 chr5 174762029 174762171 -24867979 + L3 LINE CR1 1346 1504 -73 1017 126 19 0 chr5 174762337 174762496 -24867654 + L1M1 LINE L1 5588 5749 -551 782 152 110 0 chr5 174762496 174762641 -24867509 + THE1C LTR MaLR 1 161 -214 2197 89 7 0 chr5 174762641 174762943 -24867207 - AluSx SINE Alu -7 305 2 806 98 7 92 chr5 174762944 174762992 -24867158 + MER41A LTR ERV1 415 465 -89 1940 116 6 58 chr5 174762992 174763321 -24866829 + AluSq SINE Alu 1 312 -1 806 98 7 92 chr5 174763321 174763425 -24866725 + MER41A LTR ERV1 465 554 0 424 239 67 9 chr5 174763605 174763771 -24866379 - MIR SINE MIR -62 146 18 268 73 0 0 chr5 174764476 174764517 -24865633 - L1MB3 LINE L1 0 6183 6143 2017 126 0 3 chr5 174764517 174764811 -24865339 - AluSc SINE Alu -16 293 1 2369 76 0 0 chr5 174764811 174765113 -24865037 - AluY SINE Alu -9 302 1 205 263 75 113 chr5 174765114 174765145 -24865005 + L2 LINE L2 2687 2718 -596 1945 140 0 9 chr5 174765145 174765460 -24864690 + AluSq SINE Alu 1 312 -1 205 263 75 113 chr5 174765460 174765561 -24864589 + L2 LINE L2 2718 2814 -500 884 155 58 82 chr5 174765620 174765665 -24864485 - MER20 DNA MER1_type 0 219 174 2108 98 14 0 chr5 174765665 174765961 -24864189 - AluSx SINE Alu -12 300 1 884 155 58 82 chr5 174765961 174766122 -24864028 - MER20 DNA MER1_type -45 174 18 319 253 107 0 chr5 174766227 174766302 -24863848 + L2 LINE L2 3139 3221 -51 497 284 80 49 chr5 174766417 174766553 -24863597 - MIR SINE MIR -12 250 103 1990 128 3 31 chr5 174766553 174766874 -24863276 + AluSx SINE Alu 1 312 0 497 284 80 49 chr5 174766874 174766962 -24863188 - MIR SINE MIR -159 103 19 336 288 0 0 chr5 174767072 174767152 -24862998 + MER117 DNA MER1_type 14 93 -104 260 275 88 0 chr5 174767211 174767291 -24862859 - MIR3 SINE MIR -16 192 106 886 152 8 126 chr5 174767294 174767312 -24862838 - L1ME LINE L1 -668 5502 5483 2209 103 0 0 chr5 174767312 174767613 -24862537 - AluY SINE Alu -10 301 1 886 152 8 126 chr5 174767613 174767797 -24862353 - L1ME LINE L1 -687 5483 5279 791 131 16 8 chr5 174767797 174767919 -24862231 - FLAM_C SINE Alu -10 123 1 886 152 8 126 chr5 174767919 174767963 -24862187 - L1ME LINE L1 -891 5279 5231 1721 160 3 3 chr5 174767963 174768251 -24861899 - AluJb SINE Alu -24 288 1 886 152 8 126 chr5 174768251 174768288 -24861862 - L1ME LINE L1 -939 5231 5296 2237 85 3 0 chr5 174768288 174768582 -24861568 - AluSp SINE Alu -13 300 6 886 152 8 126 chr5 174768582 174768679 -24861471 - L1ME LINE L1 -873 5297 5190 625 250 76 6 chr5 174768679 174768851 -24861299 + MIR SINE MIR 23 206 -56 1095 68 0 0 chr5 174769193 174769325 -24860825 + AluSq/x SINE Alu 4 135 -177 1578 129 8 8 chr5 174769325 174769566 -24860584 + AluSx SINE Alu 1 241 -71 1472 102 5 5 chr5 174769684 174769889 -24860261 + AluSc SINE Alu 89 293 -16 1958 148 0 3 chr5 174770002 174770133 -24860017 + AluSx SINE Alu 3 133 -179 2222 93 3 0 chr5 174770133 174770435 -24859715 + AluSx SINE Alu 5 307 -5 1958 148 0 3 chr5 174770435 174770613 -24859537 + AluSx SINE Alu 133 311 -1 219 218 0 0 chr5 174770629 174770684 -24859466 + GA-rich Low_complexity Low_complexity 2 56 0 813 161 0 0 chr5 174770704 174770828 -24859322 + FLAM_C SINE Alu 1 124 -9 1014 90 12 12 chr5 174770832 174770998 -24859152 + (GAAA)n Simple_repeat Simple_repeat 1 166 0 204 183 43 151 chr5 174771561 174771586 -24858564 - MIR SINE MIR -71 191 165 1783 126 45 39 chr5 174771586 174771753 -24858397 - AluJo SINE Alu 0 312 141 2205 93 3 3 chr5 174771753 174772055 -24858095 - AluSq SINE Alu -10 303 2 1783 126 45 39 chr5 174772055 174772197 -24857953 - AluJo SINE Alu -171 141 1 204 183 43 151 chr5 174772197 174772264 -24857886 - MIR SINE MIR -97 165 109 2159 117 0 16 chr5 174772569 174772886 -24857264 - AluSx SINE Alu 0 312 1 2626 175 6 18 chr5 174772926 174773434 -24856716 + L1 LINE L1 4533 5034 -1112 1222 91 0 11 chr5 174773449 174773624 -24856526 + AluSq SINE Alu 141 313 0 3028 192 43 20 chr5 174773624 174773740 -24856410 + L1PA16 LINE L1 5488 5600 -566 1954 131 7 3 chr5 174773740 174774030 -24856120 + AluSq SINE Alu 1 291 -22 3028 192 43 20 chr5 174774030 174774565 -24855585 + L1PA16 LINE L1 5600 6154 -12 2189 95 3 0 chr5 174774580 174774875 -24855275 - AluSp SINE Alu -17 296 1 23 54 0 0 chr5 174774880 174774917 -24855233 + AT_rich Low_complexity Low_complexity 1 37 0 439 298 142 0 chr5 174774923 174775064 -24855086 + MIR SINE MIR 102 262 0 224 294 143 48 chr5 174775060 174775186 -24854964 - L2 LINE L2 -18 3295 3158 * 2190 68 11 0 chr5 174775196 174775513 -24854637 + AluY SINE Alu 1 320 0 1886 101 33 59 chr5 174775701 174776008 -24854142 + AluSq SINE Alu 3 301 -12 242 319 57 35 chr5 174776216 174776357 -24853793 - MER5A DNA MER1_type -4 185 42 673 267 18 68 chr5 174776376 174776447 -24853703 + MIR SINE MIR 53 126 -136 2062 114 3 3 chr5 174776447 174776745 -24853405 - AluSx SINE Alu -14 298 1 673 267 18 68 chr5 174776745 174776894 -24853256 + MIR SINE MIR 126 262 0 3137 30 3 0 chr5 174776958 174777325 -24852825 + L1PA4 LINE L1 5785 6152 -3 1935 115 25 4 chr5 174777450 174777728 -24852422 - AluSq SINE Alu -29 284 1 214 300 62 38 chr5 174777766 174777846 -24852304 + MIR SINE MIR 21 102 -160 289 260 14 14 chr5 174777861 174777934 -24852216 + MIR SINE MIR 31 103 -159 2209 91 16 0 chr5 174777934 174778241 -24851909 - AluSq SINE Alu -1 312 1 448 164 0 0 chr5 174778347 174778414 -24851736 + AluJ/FRAM SINE Alu 228 294 -18 754 190 0 0 chr5 174778487 174778603 -24851547 + AluJo/FLAM SINE Alu 2 117 -195 2132 92 7 3 chr5 174778606 174778900 -24851250 - AluSx SINE Alu -17 295 1 2316 71 3 0 chr5 174779516 174779810 -24850340 + AluY SINE Alu 1 295 -16 386 196 216 20 chr5 174779833 174779935 -24850215 + MIR SINE MIR 49 170 -92 1852 111 7 7 chr5 174780010 174780298 -24849852 + AluY SINE Alu 3 290 -21 2418 67 0 3 chr5 174780346 174780658 -24849492 - AluY SINE Alu 0 311 1 1778 88 0 4 chr5 174780692 174780930 -24849220 + AluSg SINE Alu 64 300 -10 196 203 203 0 chr5 174780957 174781016 -24849134 + L2 LINE L2 3202 3272 0 344 285 82 86 chr5 174781580 174781847 -24848303 + L1ME4a LINE L1 5855 6120 -1 1107 190 18 0 chr5 174781906 174782132 -24848018 - AluJo SINE Alu -2 310 81 295 143 0 32 chr5 174782132 174782145 -24848005 + L1ME4a LINE L1 6061 6073 -48 2196 119 0 0 chr5 174782145 174782456 -24847694 - AluSx SINE Alu -1 311 1 295 143 0 32 chr5 174782456 174782505 -24847645 + L1ME4a LINE L1 6073 6121 0 293 216 0 0 chr5 174782737 174782788 -24847362 + Tigger1 DNA MER2_type 2 52 -2366 726 168 7 28 chr5 174782790 174782933 -24847217 - FRAM SINE Alu -6 170 31 689 182 123 0 chr5 174782934 174783088 -24847062 + Tigger1 DNA MER2_type 54 226 -2192 182 233 23 0 chr5 174783226 174783269 -24846881 - MIR3 SINE MIR -14 194 151 519 169 149 74 chr5 174783347 174783429 -24846721 + Charlie8 DNA MER1_type 76 150 -180 1577 205 0 0 chr5 174783429 174783732 -24846418 + AluJo SINE Alu 1 303 -9 519 169 149 74 chr5 174783732 174783797 -24846353 + Charlie8 DNA MER1_type 150 234 -96 257 186 29 14 chr5 174783796 174783866 -24846284 + Charlie8 DNA MER1_type 1346 1416 -1001 * 567 270 90 26 chr5 174783944 174784133 -24846017 + MIR SINE MIR 31 231 -31 757 253 84 104 chr5 174784209 174784357 -24845793 - MLT1G1 LTR MaLR -32 535 386 2143 119 0 3 chr5 174784357 174784668 -24845482 - AluSq SINE Alu -3 310 1 757 253 84 104 chr5 174784668 174784679 -24845471 - MLT1G1 LTR MaLR -181 386 376 2246 96 3 0 chr5 174784679 174784981 -24845169 - AluSg1 SINE Alu -6 303 1 757 253 84 104 chr5 174784981 174785219 -24844931 - MLT1G1 LTR MaLR -191 376 133 2042 124 0 0 chr5 174785219 174785517 -24844633 + AluSg SINE Alu 1 298 -12 757 253 84 104 chr5 174785517 174785647 -24844503 - MLT1G1 LTR MaLR -434 133 2 2044 132 0 0 chr5 174785647 174785943 -24844207 + AluSq SINE Alu 1 296 -17 729 305 19 16 chr5 174786366 174786684 -24843466 - L1MC4a LINE L1 -1885 5923 5605 1973 116 31 0 chr5 174787043 174787336 -24842814 + AluSg SINE Alu 1 302 -8 2042 108 3 10 chr5 174787346 174787634 -24842516 + AluSx SINE Alu 1 286 -26 2359 90 0 0 chr5 174787836 174788147 -24842003 - AluSq SINE Alu -2 311 1 500 265 0 8 chr5 174788148 174788265 -24841885 + MIR SINE MIR 121 236 -26 447 300 53 41 chr5 174788300 174788470 -24841680 - MIR SINE MIR -70 192 21 213 235 0 0 chr5 174788736 174788787 -24841363 - MIR SINE MIR -13 249 199 333 240 185 59 chr5 174788796 174789156 -24840994 - MLT1K LTR MaLR -8 580 144 2062 123 0 0 chr5 174789416 174789709 -24840441 - AluSx SINE Alu -15 297 5 23 0 0 0 chr5 174789850 174789873 -24840277 + AT_rich Low_complexity Low_complexity 1 23 0 2142 117 7 0 chr5 174789876 174790185 -24839965 - AluSx SINE Alu -1 311 1 1070 84 179 45 chr5 174790941 174791142 -24839008 + AluSg/x SINE Alu 83 307 0 255 326 65 29 chr5 174791144 174791282 -24838868 + MER5A DNA MER1_type 4 146 -43 662 161 51 0 chr5 174791673 174791791 -24838359 - FLAM_C SINE Alu -18 125 2 932 171 71 0 chr5 174791850 174792020 -24838130 - AluSg/x SINE Alu -13 297 116 551 53 67 0 chr5 174792021 174792096 -24838054 - MER30 DNA MER1_type -150 80 1 894 283 49 34 chr5 174792103 174792428 -24837722 - MLT1E LTR MaLR -263 330 1 2061 106 3 0 chr5 174792471 174792796 -24837354 + AluSq SINE Alu 1 326 0 382 194 15 0 chr5 174793175 174793242 -24836908 + MER81 DNA DNA 11 78 -36 2098 96 3 7 chr5 174793246 174793537 -24836613 + AluSc SINE Alu 2 291 -18 2282 65 0 32 chr5 174793540 174793850 -24836300 + AluY SINE Alu 1 300 -11 1473 176 0 7 chr5 174794269 174794548 -24835602 - AluJb SINE Alu 0 312 36 1687 85 0 5 chr5 174794577 174794801 -24835349 + AluSg/x SINE Alu 86 308 -2 302 250 355 15 chr5 174795094 174795362 -24834788 + L2 LINE L2 2914 3272 0 354 287 11 0 chr5 174795518 174795612 -24834538 + MIR SINE MIR 66 160 -102 312 224 56 75 chr5 174795682 174795751 -24834399 + MIR SINE MIR 121 189 -73 2174 89 0 7 chr5 174795751 174796064 -24834086 + AluSx SINE Alu 1 312 0 312 224 56 75 chr5 174796064 174796101 -24834049 + MIR SINE MIR 189 225 -37 196 267 282 0 chr5 174796150 174796281 -24833869 + MIR3 SINE MIR 34 201 -7 585 266 92 22 chr5 174796687 174796871 -24833279 + MIR3 SINE MIR 3 199 -9 417 200 95 29 chr5 174796919 174797024 -24833126 - L2 LINE L2 -6 3266 3155 1726 177 0 0 chr5 174797047 174797354 -24832796 - AluJb SINE Alu 0 307 1 187 333 28 0 chr5 174797480 174797552 -24832598 + L2 LINE L2 2888 2961 -311 258 56 0 0 chr5 174797590 174797626 -24832524 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 238 306 82 0 chr5 174797639 174797724 -24832426 - L2 LINE L2 -26 3246 3155 1761 176 3 0 chr5 174797743 174798049 -24832101 - AluSx SINE Alu -5 307 1 1658 162 7 7 chr5 174798051 174798335 -24831815 - AluJo SINE Alu -18 294 11 2295 79 7 0 chr5 174798361 174798653 -24831497 - AluY SINE Alu -8 303 10 1786 83 4 32 chr5 174798653 174798770 -24831380 - AluSg SINE Alu -61 249 130 2034 131 0 0 chr5 174798770 174799068 -24831082 - AluSg SINE Alu -10 300 3 1786 83 4 32 chr5 174799068 174799202 -24830948 - AluSg SINE Alu -180 130 5 432 92 65 111 chr5 174799851 174800004 -24830146 + AluSg/x SINE Alu 164 309 0 610 102 0 0 chr5 174800123 174800211 -24829939 + AluSg/x SINE Alu 214 301 -9 399 315 111 28 chr5 174800687 174800868 -24829282 + MIR SINE MIR 66 261 -1 2072 115 3 10 chr5 174801236 174801541 -24828609 - AluSx SINE Alu -9 303 1 1767 134 67 0 chr5 174802151 174802435 -24827715 + AluSq SINE Alu 1 303 -10 26 30 0 0 chr5 174802488 174802521 -24827629 + AT_rich Low_complexity Low_complexity 1 33 0 743 177 8 0 chr5 174803268 174803392 -24826758 - FLAM_C SINE Alu -8 125 1 2040 137 0 0 chr5 174803399 174803698 -24826452 - AluSx SINE Alu -13 299 1 383 16 62 0 chr5 174804184 174804248 -24825902 + (TA)n Simple_repeat Simple_repeat 2 69 0 592 214 94 71 chr5 174804248 174804425 -24825725 + L1MC5 LINE L1 7415 7603 -358 1766 137 0 11 chr5 174804425 174804696 -24825454 - AluSx SINE Alu -11 301 34 592 214 94 71 chr5 174804696 174804822 -24825328 + L1MC5 LINE L1 7603 7725 -236 2078 96 3 0 chr5 174804830 174805143 -24825007 + AluSp SINE Alu 1 314 0 1414 134 5 0 chr5 174805155 174805364 -24824786 + AluSp SINE Alu 1 210 -103 198 0 0 0 chr5 174805378 174805400 -24824750 + (A)n Simple_repeat Simple_repeat 1 22 0 1319 187 0 81 chr5 174805443 174805583 -24824567 + AluJo SINE Alu 1 102 -210 2178 100 0 0 chr5 174805583 174805872 -24824278 - AluSq SINE Alu -23 290 2 1319 187 0 81 chr5 174805872 174806052 -24824098 + AluJo SINE Alu 102 295 -17 1501 173 99 0 chr5 174806278 174806590 -24823560 + AluJo SINE Alu 1 340 0 1877 145 0 3 chr5 174806638 174806928 -24823222 - AluSx SINE Alu -23 289 1 185 300 71 14 chr5 174807192 174807262 -24822888 - MIR SINE MIR -78 130 57 2052 99 7 10 chr5 174807282 174807584 -24822566 + AluSx SINE Alu 1 301 -11 224 296 278 6 chr5 174808288 174808464 -24821686 + MIR SINE MIR 20 243 -19 474 175 0 12 chr5 174808573 174808653 -24821497 + AluJ/FLAM SINE Alu 2 80 -232 1759 100 111 11 chr5 174808654 174808933 -24821217 + AluSg1 SINE Alu 1 307 -2 1032 205 26 103 chr5 174808936 174809120 -24821030 + L1MD2 LINE L1 4929 5069 -1077 1988 100 32 4 chr5 174809120 174809399 -24820751 + AluSx SINE Alu 2 288 -24 1032 205 26 103 chr5 174809399 174809604 -24820546 + L1MD2 LINE L1 5069 5288 -858 1473 192 0 27 chr5 174809621 174809918 -24820232 + AluJo SINE Alu 23 311 -1 2581 182 18 54 chr5 174809919 174810346 -24819804 + L1MD2 LINE L1 5272 5713 -646 2333 103 3 0 chr5 174810346 174810646 -24819504 + AluSc SINE Alu 1 301 -8 2581 182 18 54 chr5 174810646 174810990 -24819160 + L1MD2 LINE L1 5713 6013 -346 2241 118 3 0 chr5 174810990 174811287 -24818863 + AluSx SINE Alu 1 298 -14 2581 182 18 54 chr5 174811287 174811445 -24818705 + L1MD2 LINE L1 6013 6175 -184 210 241 35 0 chr5 174811578 174811636 -24818514 - MIR SINE MIR -130 132 73 2020 115 7 4 chr5 174811663 174811970 -24818180 + AluSx SINE Alu 3 310 0 25 31 0 0 chr5 174812087 174812119 -24818031 + AT_rich Low_complexity Low_complexity 1 32 0 1795 157 4 0 chr5 174812125 174812392 -24817758 - AluSg SINE Alu -24 286 19 790 345 49 16 chr5 174812605 174813034 -24817116 + L2 LINE L2 2830 3272 0 2315 82 7 16 chr5 174813212 174813224 -24816926 - AluSq SINE Alu -11 302 291 2295 124 0 3 chr5 174813224 174813538 -24816612 - AluSq SINE Alu 0 313 1 2315 82 7 16 chr5 174813538 174813694 -24816456 - AluSq SINE Alu -22 291 136 2242 121 0 3 chr5 174813694 174814000 -24816150 - AluSg SINE Alu -5 305 1 2315 82 7 16 chr5 174814000 174814135 -24816015 - AluSq SINE Alu -177 136 1 494 232 8 0 chr5 174814156 174814281 -24815869 - Charlie5 DNA MER1_type 0 2624 2499 227 104 21 0 chr5 174814281 174814329 -24815821 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 2212 111 3 0 chr5 174814335 174814623 -24815527 - AluSp SINE Alu -24 289 1 2169 89 3 54 chr5 174814625 174814940 -24815210 - AluSx SINE Alu -13 299 1 1660 156 4 18 chr5 174815021 174815297 -24814853 - AluJb SINE Alu -10 302 31 186 103 0 0 chr5 174815468 174815497 -24814653 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 1711 164 28 47 chr5 174815515 174815833 -24814317 - AluJo SINE Alu 0 312 1 207 0 0 0 chr5 174816019 174816042 -24814108 + (A)n Simple_repeat Simple_repeat 1 23 0 678 310 23 43 chr5 174816069 174816174 -24813976 - L2 LINE L2 -993 2321 2215 2228 87 0 64 chr5 174816174 174816347 -24813803 - AluSp SINE Alu -21 292 146 2453 75 3 3 chr5 174816347 174816655 -24813495 - AluY SINE Alu -1 310 3 2228 87 0 64 chr5 174816655 174816793 -24813357 - AluSp SINE Alu -167 146 1 678 310 23 43 chr5 174816793 174817035 -24813115 - L2 LINE L2 -1099 2215 1981 197 316 133 14 chr5 174817057 174817402 -24812748 - L2 LINE L2 -2293 1021 636 3722 103 12 9 chr5 174817412 174817984 -24812166 + LTR10C LTR ERV1 1 547 0 1551 157 44 41 chr5 174818113 174818406 -24811744 + AluSx SINE Alu 1 294 -18 660 137 0 40 chr5 174818472 174818596 -24811554 + FRAM SINE Alu 10 128 -48 2249 81 11 7 chr5 174818991 174819302 -24810848 - AluSp SINE Alu 0 312 1 384 220 40 10 chr5 174819953 174820053 -24810097 + MIR3 SINE MIR 81 183 -25 213 255 0 0 chr5 174820216 174820263 -24809887 + T-rich Low_complexity Low_complexity 1 47 0 903 193 71 50 chr5 174820285 174820481 -24809669 - MER58B DNA MER1_type -2088 332 129 2386 100 0 6 chr5 174820481 174820792 -24809358 - AluSq SINE Alu -4 309 1 903 193 71 50 chr5 174820792 174820834 -24809316 - MER58B DNA MER1_type -2291 129 89 906 146 0 7 chr5 174820838 174820975 -24809175 + AluJo SINE Alu 1 136 -176 182 237 34 17 chr5 174820990 174821049 -24809101 + MIR SINE MIR 149 208 -54 2457 83 3 0 chr5 174821481 174821781 -24808369 - AluSp SINE Alu -12 301 1 272 298 53 26 chr5 174821897 174822011 -24808139 + L2 LINE L2 2430 2546 -768 315 365 23 46 chr5 174822056 174822080 -24808070 + L2 LINE L2 2691 2714 -600 1719 114 100 21 chr5 174822080 174822361 -24807789 + AluY SINE Alu 1 303 -8 315 365 23 46 chr5 174822361 174822433 -24807717 + L2 LINE L2 2714 2786 -528 2340 95 0 3 chr5 174822433 174822728 -24807422 + AluSq SINE Alu 1 294 -19 315 365 23 46 chr5 174822728 174822849 -24807301 + L2 LINE L2 2786 2904 -410 21 0 0 0 chr5 174822849 174822870 -24807280 + AT_rich Low_complexity Low_complexity 1 21 0 435 164 0 106 chr5 174822870 174822929 -24807221 - FLAM_C SINE Alu -187 125 80 2418 77 0 37 chr5 174822929 174823252 -24806898 + AluY SINE Alu 1 311 0 435 164 0 106 chr5 174823252 174823296 -24806854 - FLAM_C SINE Alu -232 80 33 285 321 101 47 chr5 174823384 174823454 -24806696 + L2 LINE L2 3019 3084 -229 756 167 0 0 chr5 174823454 174823574 -24806576 - FLAM_A SINE Alu -13 120 1 285 321 101 47 chr5 174823574 174823780 -24806370 + L2 LINE L2 3084 3310 -3 260 234 129 40 chr5 174823837 174823961 -24806189 - L2 LINE L2 -6 3266 3132 1472 148 5 0 chr5 174824079 174824289 -24805861 + AluJo SINE Alu 2 212 -100 4536 117 184 102 chr5 174824296 174825719 -24804431 - pTR5 LTR ERV1 0 2438 743 584 152 0 0 chr5 174825719 174825818 -24804332 + AluJo SINE Alu 213 311 -1 325 234 0 0 chr5 174826135 174826199 -24803951 + L2 LINE L2 3249 3312 -1 2454 94 3 0 chr5 174826251 174826560 -24803590 + AluSx SINE Alu 1 310 -2 1504 200 51 3 chr5 174826694 174826989 -24803161 - AluJb SINE Alu -3 309 1 2469 76 0 3 chr5 174827817 174828121 -24802029 - AluY SINE Alu -8 303 1 275 250 0 0 chr5 174828335 174828399 -24801751 - MER91 DNA MER1_type -76 64 1 247 203 92 0 chr5 174828644 174828709 -24801441 + MIR SINE MIR 53 122 -107 751 156 192 0 chr5 174828830 174828997 -24801153 - MER20 DNA MER1_type -14 205 7 507 33 0 0 chr5 174829170 174829231 -24800919 + (TG)n Simple_repeat Simple_repeat 1 61 0 235 217 11 22 chr5 174829231 174829323 -24800827 + GA-rich Low_complexity Low_complexity 4 94 0 381 296 202 19 chr5 174829547 174830234 -24799916 + L2 LINE L2 2468 3313 0 344 269 241 0 chr5 174831334 174831479 -24798671 + MIR SINE MIR 46 225 -37 211 276 0 82 chr5 174831501 174831599 -24798551 - MIR SINE MIR -102 106 17 2498 78 0 3 chr5 174831654 174831961 -24798189 - AluSq SINE Alu -6 307 2 241 298 207 16 chr5 174832109 174832230 -24797920 + L1MC4a LINE L1 5509 5652 -2156 326 286 94 71 chr5 174832250 174832323 -24797827 + L1MC4a LINE L1 5940 6010 -1798 1856 168 0 7 chr5 174832323 174832621 -24797529 + AluJb SINE Alu 1 296 -16 326 286 94 71 chr5 174832621 174832771 -24797379 + L1MC4a LINE L1 6010 6168 -1640 223 343 14 0 chr5 174832877 174832947 -24797203 + CT-rich Low_complexity Low_complexity 2 72 0 232 75 19 57 chr5 174832998 174833014 -24797136 + (TTCA)n Simple_repeat Simple_repeat 1 16 -35 1955 164 3 3 chr5 174833014 174833313 -24796837 - AluJb SINE Alu -13 299 1 232 75 19 57 chr5 174833313 174833349 -24796801 + (TTCA)n Simple_repeat Simple_repeat 16 51 0 302 270 143 8 chr5 174833583 174833709 -24796441 - L1MC5 LINE L1 -36 7925 7783 448 171 34 96 chr5 174833713 174833764 -24796386 - LTR54B LTR ERV1 -2 496 443 2302 77 17 27 chr5 174833764 174834064 -24796086 + AluY SINE Alu 1 297 -14 448 171 34 96 chr5 174834064 174834158 -24795992 - LTR54B LTR ERV1 -55 443 360 2120 143 0 0 chr5 174834158 174834451 -24795699 - AluSq SINE Alu -20 293 1 400 171 12 0 chr5 174834451 174834533 -24795617 - Charlie8 DNA MER1_type -2248 169 87 477 255 215 15 chr5 174835644 174835844 -24794306 + MIR SINE MIR 10 249 -13 * 563 302 124 35 chr5 174835842 174836350 -24793800 - L2 LINE L2 0 3313 2745 224 360 44 15 chr5 174836695 174836831 -24793319 - L2 LINE L2 -46 3226 3087 182 299 24 79 chr5 174836879 174836940 -24793210 + L2 LINE L2 2832 2895 -377 2047 148 3 3 chr5 174836940 174837244 -24792906 - AluSx SINE Alu -8 304 1 182 299 24 79 chr5 174837244 174837346 -24792804 + L2 LINE L2 2895 2986 -286 2191 131 0 0 chr5 174837396 174837687 -24792463 - AluSx SINE Alu -21 291 1 2489 91 3 0 chr5 174837693 174838001 -24792149 - AluSp SINE Alu 0 313 5 598 192 0 0 chr5 174838068 174838172 -24791978 + FLAM_A SINE Alu 6 109 -33 2074 125 7 0 chr5 174838174 174838495 -24791655 - AluSq SINE Alu 0 323 1 1679 136 0 52 chr5 174838501 174838809 -24791341 - AluSg SINE Alu 0 310 19 415 121 0 0 chr5 174839152 174839210 -24790940 - AluS SINE Alu -256 62 5 23 0 0 0 chr5 174839351 174839374 -24790776 + AT_rich Low_complexity Low_complexity 1 23 0 2399 110 3 0 chr5 174839377 174839687 -24790463 - AluSx SINE Alu -1 311 1 873 256 73 89 chr5 174839730 174840062 -24790088 + MLT1E LTR MaLR 1 327 -240 999 105 216 5 chr5 174840062 174840155 -24789995 + MER30 DNA MER1_type 1 73 -157 321 26 0 0 chr5 174840155 174840193 -24789957 + (CAA)n Simple_repeat Simple_repeat 2 39 0 999 105 216 5 chr5 174840193 174840289 -24789861 + MER30 DNA MER1_type 73 230 0 873 256 73 89 chr5 174840289 174840329 -24789821 + MLT1E LTR MaLR 327 366 -201 1991 197 81 14 chr5 174840346 174840792 -24789358 - MLT2B1 LTR ERVL -44 476 1 614 223 29 85 chr5 174840793 174840885 -24789265 + MLT1E LTR MaLR 334 430 -122 2329 101 0 3 chr5 174840885 174841183 -24788967 + AluY SINE Alu 2 298 -13 614 223 29 85 chr5 174841183 174841295 -24788855 + MLT1E LTR MaLR 430 552 0 931 169 31 92 chr5 174841299 174841543 -24788607 - L1ME3A LINE L1 -27 6143 5914 2115 133 0 23 chr5 174841543 174841843 -24788307 + AluSx SINE Alu 1 293 -19 931 169 31 92 chr5 174841843 174841858 -24788292 - L1ME3A LINE L1 -256 5914 5900 2430 109 0 0 chr5 174842040 174842352 -24787798 - AluSx SINE Alu 0 312 1 2329 125 0 0 chr5 174842738 174843050 -24787100 + AluSx SINE Alu 1 312 0 2062 149 0 7 chr5 174843080 174843381 -24786769 + AluSx SINE Alu 1 299 -13 199 212 242 0 chr5 174843404 174843470 -24786680 - MIR SINE MIR -98 164 83 2446 54 0 0 chr5 174843517 174843868 -24786282 - AluY SINE Alu 0 352 2 2221 94 52 0 chr5 174843872 174844158 -24785992 - AluSx SINE Alu -11 301 1 2260 97 17 10 chr5 174844158 174844455 -24785695 - AluSq SINE Alu -13 300 1 1745 171 64 0 chr5 174844455 174844734 -24785416 - AluJb SINE Alu -14 298 1 238 220 11 11 chr5 174844862 174844953 -24785197 + (TCCA)n Simple_repeat Simple_repeat 1 91 0 889 211 6 0 chr5 174845088 174845249 -24784901 - FRAM SINE Alu -14 162 1 788 316 49 31 chr5 174845317 174845770 -24784380 + L2 LINE L2 2806 3266 -47 321 89 0 0 chr5 174845774 174845819 -24784331 - AluJ/FLAM SINE Alu -203 99 60 2340 119 0 3 chr5 174845891 174846201 -24783949 - AluSx SINE Alu -3 309 1 183 80 0 0 chr5 174846219 174846244 -24783906 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 2023 142 7 3 chr5 174846810 174847119 -24783031 - AluSq SINE Alu -3 310 1 992 155 44 5 chr5 174847119 174847438 -24782712 - LTR54B LTR ERV1 -123 387 2 658 242 0 0 chr5 174847451 174847579 -24782571 - FLAM_A SINE Alu -5 128 1 310 141 0 109 chr5 174847587 174847617 -24782533 - L1MC5 LINE L1 -182 7779 7747 2320 113 3 0 chr5 174847617 174847918 -24782232 - AluSq SINE Alu -11 302 1 310 141 0 109 chr5 174847918 174847979 -24782171 - L1MC5 LINE L1 -214 7747 7698 254 154 0 0 chr5 174847984 174848023 -24782127 + AluSg/x SINE Alu 211 249 -53 921 161 25 83 chr5 174848024 174848266 -24781884 + AluJo SINE Alu 85 312 0 2279 93 0 29 chr5 174848397 174848708 -24781442 - AluSq SINE Alu -11 302 1 655 131 0 0 chr5 174849159 174849258 -24780892 + AluSg/x SINE Alu 205 303 -7 637 288 64 27 chr5 174849423 174849718 -24780432 + MLT1L LTR MaLR 86 391 -224 241 65 87 0 chr5 174849869 174849915 -24780235 + T-rich Low_complexity Low_complexity 3 52 0 2059 113 20 10 chr5 174850070 174850371 -24779779 + AluSg SINE Alu 1 304 -6 340 258 47 47 chr5 174851455 174851643 -24778507 + L1ME4a LINE L1 5852 6042 -79 2470 83 0 0 chr5 174851643 174851943 -24778207 - AluSq SINE Alu -13 300 1 340 258 47 47 chr5 174851943 174852010 -24778140 + L1ME4a LINE L1 6041 6107 -14 1646 203 17 0 chr5 174852080 174852375 -24777775 + AluJo SINE Alu 1 300 -12 1524 179 84 60 chr5 174852388 174852566 -24777584 + MSTC LTR MaLR 1 173 -255 1031 189 118 68 chr5 174852566 174852685 -24777465 + AluJo SINE Alu 2 114 -188 2254 110 7 7 chr5 174852685 174852994 -24777156 - AluSg SINE Alu 0 310 2 1031 189 118 68 chr5 174852994 174853154 -24776996 + AluJo SINE Alu 114 295 -7 1930 151 6 22 chr5 174853154 174853465 -24776685 + AluJb SINE Alu 1 306 -6 1524 179 84 60 chr5 174853465 174853637 -24776513 + MSTC LTR MaLR 173 366 -62 808 150 0 8 chr5 174853637 174853770 -24776380 - FLAM_C SINE Alu -1 132 1 1524 179 84 60 chr5 174853770 174853835 -24776315 + MSTC LTR MaLR 366 428 0 385 278 76 29 chr5 174854101 174854284 -24775866 + MIR3 SINE MIR 2 196 -66 525 327 24 14 chr5 174855284 174855492 -24774658 - MIR SINE MIR -2 260 51 1655 138 21 103 chr5 174855900 174856076 -24774074 - AluYb8 SINE Alu -6 312 123 2166 125 0 0 chr5 174856076 174856373 -24773777 - AluY SINE Alu -14 297 1 1655 138 21 103 chr5 174856373 174856387 -24773763 - AluYb8 SINE Alu -195 123 109 2396 86 0 3 chr5 174856387 174856688 -24773462 - AluY SINE Alu -11 300 1 1655 138 21 103 chr5 174856688 174856836 -24773314 - AluYb8 SINE Alu -209 109 1 536 283 121 37 chr5 174857236 174857558 -24772592 + LTR67 LTR ERVL 200 548 -9 357 121 12 72 chr5 174857865 174857948 -24772202 - MER116 DNA Mariner 0 80 3 665 24 12 0 chr5 174858009 174858092 -24772058 + (TTTC)n Simple_repeat Simple_repeat 3 86 0 1870 174 0 3 chr5 174858096 174858384 -24771766 - AluJo SINE Alu -25 287 1 639 158 63 16 chr5 174858398 174858525 -24771625 - FLAM_C SINE Alu 0 133 1 733 158 8 0 chr5 174858591 174858734 -24771416 + FLAM_C SINE Alu 1 144 0 372 276 0 0 chr5 174859060 174859147 -24771003 + L1ME LINE L1 5738 5824 -297 2407 90 3 0 chr5 174859150 174859450 -24770700 + AluSq SINE Alu 1 301 -12 972 208 12 0 chr5 174859460 174859633 -24770517 + AluJb SINE Alu 137 311 -1 1753 183 3 19 chr5 174860400 174860717 -24769433 - AluJo SINE Alu 0 312 1 1214 202 71 25 chr5 174860719 174861001 -24769149 - AluJo SINE Alu -17 295 1 800 234 6 6 chr5 174861002 174861177 -24768973 - MIR SINE MIR -68 194 20 2334 107 0 0 chr5 174861236 174861535 -24768615 - AluSx SINE Alu -13 299 1 1441 167 0 9 chr5 174861535 174861768 -24768382 - AluJo SINE Alu -14 298 68 545 200 32 17 chr5 174862569 174862703 -24767447 + MER5A DNA MER1_type 7 151 -38 236 253 74 21 chr5 174863005 174863100 -24767050 - MIR SINE MIR -34 228 129 1283 165 62 0 chr5 174863104 174863347 -24766803 + AluJb SINE Alu 1 258 -54 294 230 68 14 chr5 174864146 174864220 -24765930 - L2 LINE L2 -8 3264 3187 251 211 158 0 chr5 174864856 174864913 -24765237 - MIR SINE MIR -140 122 57 1871 135 0 22 chr5 174865194 174865513 -24764637 + AluSx SINE Alu 1 312 0 794 195 136 56 chr5 174865517 174865804 -24764346 + AluJo SINE Alu 1 310 -2 2211 152 97 61 chr5 174865995 174866244 -24763906 + L1MB2 LINE L1 5582 5821 -350 1938 142 3 0 chr5 174866244 174866539 -24763611 + AluSx SINE Alu 1 296 -16 2211 152 97 61 chr5 174866539 174866858 -24763292 + L1MB2 LINE L1 5821 6170 -1 565 207 143 93 chr5 174866885 174867006 -24763144 + AluJo SINE Alu 18 132 -180 1986 122 3 13 chr5 174867006 174867310 -24762840 + AluSq SINE Alu 1 301 -12 1833 104 62 3 chr5 174867313 174867602 -24762548 + AluSq SINE Alu 1 306 -7 565 207 143 93 chr5 174867602 174867756 -24762394 + AluJo SINE Alu 133 311 -1 715 246 275 19 chr5 174867770 174868396 -24761754 + L1MC4 LINE L1 7223 8008 -34 1984 134 3 6 chr5 174869020 174869333 -24760817 + AluSx SINE Alu 1 312 0 1317 159 98 15 chr5 174869371 174869635 -24760515 + AluSg SINE Alu 9 294 -16 1509 158 88 14 chr5 174869741 174869877 -24760273 + AluSx SINE Alu 1 126 -186 2273 92 0 3 chr5 174869877 174870182 -24759968 + AluSx SINE Alu 1 304 -8 1509 158 88 14 chr5 174870182 174870329 -24759821 + AluSx SINE Alu 126 305 -7 1508 141 27 8 chr5 174870539 174870795 -24759355 - AluJb SINE Alu -22 290 30 949 80 0 0 chr5 174870797 174870922 -24759228 + AluSg/x SINE Alu 157 281 -31 198 0 0 0 chr5 174870928 174870950 -24759200 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2028 97 21 0 chr5 174871278 174871584 -24758566 + AluSq SINE Alu 1 312 0 889 133 0 15 chr5 174871645 174871780 -24758370 + FLAM_C SINE Alu 1 133 0 1123 108 0 12 chr5 174871840 174872007 -24758143 + AluSx SINE Alu 1 165 -147 972 229 186 8 chr5 174972013 174972379 -24657771 + MLT1H LTR MaLR 115 545 -4 621 333 94 43 chr5 174972488 174972903 -24657247 + L2 LINE L2 2832 3267 -5 209 321 0 0 chr5 174973174 174973230 -24656920 + L2 LINE L2 3209 3264 -8 237 65 0 0 chr5 174973232 174973263 -24656887 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 332 225 180 0 chr5 174973539 174973628 -24656522 + MER81 DNA DNA 4 108 -6 189 269 19 19 chr5 174973901 174973953 -24656197 - MIR SINE MIR -139 69 18 414 274 94 103 chr5 174974601 174975145 -24655005 + L1M2 LINE L1 714 1252 -5597 307 321 28 0 chr5 174975387 174975496 -24654654 - L2 LINE L2 -2 3311 3200 1738 164 0 27 chr5 174975870 174976169 -24653981 + AluJo SINE Alu 9 299 -13 527 88 20 29 chr5 174976189 174976291 -24653859 + (GAAA)n Simple_repeat Simple_repeat 4 104 0 227 272 16 80 chr5 174976335 174976460 -24653690 + MIR SINE MIR 56 172 -90 373 265 174 8 chr5 174977163 174977295 -24652855 + MIR3 SINE MIR 34 187 -21 497 320 72 72 chr5 174977520 174977883 -24652267 + L2 LINE L2 2905 3267 -5 2130 91 11 4 chr5 174978093 174978367 -24651783 + AluSq SINE Alu 24 299 -14 275 255 98 20 chr5 174978501 174978603 -24651547 - MIR SINE MIR -65 197 88 604 179 0 0 chr5 174979007 174979102 -24651048 + AluSg/x SINE Alu 185 279 -33 249 33 0 0 chr5 174979104 174979134 -24651016 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 323 238 79 0 chr5 174979135 174979236 -24650914 + MIR SINE MIR 154 262 0 2255 110 0 0 chr5 174979240 174979532 -24650618 - AluSx SINE Alu -20 292 1 14795 119 31 26 chr5 174979533 174981835 -24648315 + Tigger2 DNA MER2_type 406 2718 0 296 331 49 37 chr5 174981950 174982113 -24648037 + L2 LINE L2 2935 3099 -173 2898 202 75 37 chr5 174982160 174982490 -24647660 + MER82 DNA MER2_type 2 318 -335 441 0 0 0 chr5 174982490 174982539 -24647611 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1906 141 0 14 chr5 174982539 174982822 -24647328 - AluSx SINE Alu -33 279 1 2898 202 75 37 chr5 174982822 174983118 -24647032 + MER82 DNA MER2_type 317 653 0 1162 259 103 37 chr5 174983180 174983522 -24646628 + LTR33 LTR ERVL 1 386 -135 1994 194 14 30 chr5 174983522 174983893 -24646257 - MLT1A1 LTR MaLR 0 365 1 1162 259 103 37 chr5 174983893 174984036 -24646114 + LTR33 LTR ERVL 386 518 -3 369 0 0 0 chr5 174985216 174985257 -24644893 + (CA)n Simple_repeat Simple_repeat 2 42 0 566 177 171 11 chr5 174985427 174985584 -24644566 - MER5A DNA MER1_type 0 189 4 22 0 0 0 chr5 174986560 174986582 -24643568 + AT_rich Low_complexity Low_complexity 1 22 0 517 319 24 44 chr5 174987043 174987291 -24642859 + MIR SINE MIR 2 244 -18 862 239 5 5 chr5 174988690 174988874 -24641276 + MIR SINE MIR 12 195 -67 4049 167 47 106 chr5 174988875 174990365 -24639785 + L1MC1 LINE L1 4353 5692 -641 1565 170 56 7 chr5 174990365 174990635 -24639515 + AluSx SINE Alu 16 298 -14 4049 167 47 106 chr5 174990635 174991196 -24638954 + L1MC1 LINE L1 5692 6284 -49 451 258 171 67 chr5 174992551 174992849 -24637301 - MER102a DNA MER1_type -1 329 1 401 295 0 9 chr5 174993016 174993128 -24637022 + MER5A DNA MER1_type 7 117 -72 192 232 71 81 chr5 174993289 174993379 -24636771 - MIR SINE MIR -70 138 48 880 256 27 127 chr5 174994298 174994787 -24635363 + L2 LINE L2 2874 3313 0 223 274 78 0 chr5 174994816 174994867 -24635283 - L2 LINE L2 -62 3210 3156 2196 114 0 3 chr5 174995908 174996207 -24633943 - AluSg SINE Alu -12 298 1 340 289 21 10 chr5 174996212 174996309 -24633841 - MER5A DNA MER1_type -7 182 85 237 103 46 23 chr5 174996360 174996408 -24633742 - MIR SINE MIR -56 152 103 441 245 55 35 chr5 174997065 174997265 -24632885 - L2 LINE L2 -386 2928 2725 284 222 0 0 chr5 174997982 174998036 -24632114 + L2 LINE L2 3215 3268 -4 316 292 11 0 chr5 174998043 174998132 -24632018 + MIR3 SINE MIR 113 202 -6 241 216 59 0 chr5 174998255 174998306 -24631844 - L2 LINE L2 -22 3291 3238 515 255 41 87 chr5 174998317 174998392 -24631758 + MER5A DNA MER1_type 1 78 -111 1729 128 69 11 chr5 174998392 174998666 -24631484 + AluJo SINE Alu 1 290 -22 515 255 41 87 chr5 174998666 174998786 -24631364 + MER5A DNA MER1_type 78 187 -2 287 169 32 145 chr5 174998850 174998974 -24631176 - MER102a DNA MER1_type 0 330 221 212 310 0 0 chr5 174999140 174999198 -24630952 + L2 LINE L2 3251 3308 -5 34 65 0 0 chr5 174999738 174999800 -24630350 + AT_rich Low_complexity Low_complexity 1 62 0 2285 138 37 105 chr5 174999859 174999913 -24630237 + MSTB LTR MaLR 1 57 -369 2275 119 0 0 chr5 174999913 175000223 -24629927 + AluSx SINE Alu 1 310 -2 2285 138 37 105 chr5 175000223 175000625 -24629525 + MSTB LTR MaLR 57 426 0 1877 127 21 7 chr5 175000652 175000935 -24629215 - MER1B DNA MER1_type 0 339 53 654 263 21 10 chr5 175001195 175001389 -24628761 + MER117 DNA MER1_type 1 196 -1 3109 169 55 2 chr5 175001477 175002009 -24628141 + MER68 LTR ERV1 3 562 0 233 325 148 15 chr5 175002382 175002585 -24627565 + MIR SINE MIR 28 257 -5 326 309 149 6 chr5 175003296 175003471 -24626679 - MIR SINE MIR -18 244 45 3588 152 58 10 chr5 175003606 175004213 -24625937 - L1PA16 LINE L1 -13 6153 5518 2128 134 0 3 chr5 175004762 175005060 -24625090 - AluSx SINE Alu -15 297 1 239 67 0 0 chr5 175005092 175005122 -24625028 + MIR SINE MIR 115 144 -64 324 270 57 11 chr5 175005877 175005975 -24624175 - MER5A DNA MER1_type -62 125 15 383 241 23 0 chr5 175006031 175006118 -24624032 - L2 LINE L2 0 3313 3225 2636 77 0 34 chr5 175006205 175006556 -24623594 - L1PA7 LINE L1 0 6154 5816 619 40 0 0 chr5 175006556 175006631 -24623519 + L1PA7 LINE L1 5735 5809 -363 2199 124 0 3 chr5 175006870 175007176 -24622974 + AluSx SINE Alu 1 305 -7 465 19 0 0 chr5 175007176 175007230 -24622920 + (TA)n Simple_repeat Simple_repeat 2 55 0 468 256 45 28 chr5 175007522 175007681 -24622469 - MER5A DNA MER1_type -15 163 16 383 324 44 0 chr5 175007951 175008087 -24622063 - MIR3 SINE MIR -51 157 16 213 39 0 0 chr5 175008542 175008568 -24621582 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 868 233 39 11 chr5 175008570 175008750 -24621400 - AluJo SINE Alu -19 293 109 21 57 0 0 chr5 175008929 175008964 -24621186 + AT_rich Low_complexity Low_complexity 1 35 0 433 216 82 8 chr5 175009062 175009196 -24620954 + L1MC5 LINE L1 7810 7953 -8 236 221 44 29 chr5 175009743 175009811 -24620339 + MER117 DNA MER1_type 13 81 -116 280 287 65 19 chr5 175009919 175010027 -24620123 - MIR3 SINE MIR -46 162 50 4383 200 64 68 chr5 175010807 175011236 -24618914 - L1MC4 LINE L1 0 8042 7613 2134 113 3 3 chr5 175011236 175011527 -24618623 - AluSp SINE Alu -22 291 1 4383 200 64 68 chr5 175011527 175012233 -24617917 - L1MC4 LINE L1 -429 7613 6911 1744 176 30 7 chr5 175012233 175012529 -24617621 + AluJb SINE Alu 3 305 -7 4383 200 64 68 chr5 175012529 175012697 -24617453 - L1MC4 LINE L1 -1131 6911 6744 2361 82 0 32 chr5 175013020 175013335 -24616815 + AluSg SINE Alu 1 305 -5 247 312 26 0 chr5 175013909 175013986 -24616164 + MIR3 SINE MIR 95 173 -35 1709 148 3 69 chr5 175014038 175014343 -24615807 + AluJb SINE Alu 1 285 -27 922 149 5 108 chr5 175014149 175014343 -24615807 + AluSg/x SINE Alu 110 310 0 189 0 74 0 chr5 175014343 175014370 -24615780 + (CAAAA)n Simple_repeat Simple_repeat 2 180 0 355 268 78 42 chr5 175014551 175014693 -24615457 - MER117 DNA MER1_type -49 148 2 269 246 49 57 chr5 175014868 175014990 -24615160 - MIR SINE MIR -50 212 92 288 243 48 176 chr5 175015738 175015862 -24614288 + L1MC4a LINE L1 5518 5656 -2152 1778 195 0 3 chr5 175015862 175016164 -24613986 + AluJb SINE Alu 1 301 -11 288 243 48 176 chr5 175016164 175016372 -24613778 + L1MC4a LINE L1 5656 5783 -2025 2143 96 0 17 chr5 175016372 175016664 -24613486 - AluSx SINE Alu -25 287 1 288 243 48 176 chr5 175016664 175016767 -24613383 + L1MC4a LINE L1 5783 5898 -1910 2125 128 0 0 chr5 175016859 175017156 -24612994 - AluSx SINE Alu -15 297 1 396 289 66 5 chr5 175017343 175017540 -24612610 + L1ME4a LINE L1 5678 5886 -235 363 255 38 9 chr5 175018681 175018787 -24611363 - MIR3 SINE MIR -8 200 92 995 92 0 23 chr5 175019158 175019288 -24610862 - FLAM_C SINE Alu -5 128 2 1568 197 130 48 chr5 175019658 175020120 -24610030 + MER20B DNA MER1_type 173 672 -111 1057 156 0 0 chr5 175020122 175020295 -24609855 + AluJo SINE Alu 124 296 -16 581 200 0 8 chr5 175020314 175020439 -24609711 + MER20B DNA MER1_type 659 782 -1 2328 117 0 0 chr5 175021745 175022052 -24608098 + AluSq SINE Alu 1 307 -6 907 196 0 12 chr5 175022201 175022369 -24607781 - MER5A DNA MER1_type -21 168 3 206 316 0 13 chr5 175022408 175022484 -24607666 + MIR SINE MIR 71 145 -63 1893 143 3 17 chr5 175022628 175022929 -24607221 - AluJo SINE Alu -10 302 6 208 191 0 43 chr5 175023851 175023898 -24606252 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 248 121 72 12 chr5 175023904 175023987 -24606163 + CT-rich Low_complexity Low_complexity 2 89 0 328 318 78 26 chr5 175024103 175024257 -24605893 + L3 LINE CR1 1352 1513 -64 215 288 100 0 chr5 175024384 175024464 -24605686 + MIR SINE MIR 32 119 -89 258 258 93 73 chr5 175024705 175024856 -24605294 - MIR SINE MIR -4 258 105 397 281 29 82 chr5 175025331 175025502 -24604648 - MIR3 SINE MIR -9 199 38 579 229 159 6 chr5 175026482 175026639 -24603511 - MER5A DNA MER1_type 0 189 9 278 308 63 56 chr5 175027158 175027301 -24602849 + MIR3 SINE MIR 34 177 -31 1840 153 0 18 chr5 175027479 175027761 -24602389 + AluJo SINE Alu 5 281 -31 2162 138 26 35 chr5 175027761 175028138 -24602012 + THE1C LTR MaLR 2 375 0 196 224 0 82 chr5 175028176 175028225 -24601925 + MIR3 SINE MIR 152 196 -12 1477 129 39 126 chr5 175028286 175028619 -24601531 - AluJb SINE Alu -8 304 1 332 247 22 107 chr5 175028713 175028891 -24601259 - MIR SINE MIR -67 195 33 580 260 160 18 chr5 175028906 175029125 -24601025 - MIR SINE MIR 0 262 13 556 250 44 56 chr5 175029254 175029434 -24600716 - MIR SINE MIR -81 181 4 593 156 10 0 chr5 175029435 175029531 -24600619 - MER58 DNA MER1_type -1 2419 2323 771 193 28 84 chr5 175030240 175030374 -24599776 - L1MD3 LINE L1 -1 7994 7875 2227 8 0 0 chr5 175030374 175030610 -24599540 + L1PA2 LINE L1 5916 6151 -4 771 193 28 84 chr5 175030610 175030688 -24599462 - L1MD3 LINE L1 -120 7875 7794 821 242 50 10 chr5 175030953 175030967 -24599183 + MER3 DNA MER1_type 1 13 -196 2085 94 0 0 chr5 175030967 175031232 -24598918 + AluSg SINE Alu 33 297 -13 821 242 50 10 chr5 175031232 175031415 -24598735 + MER3 DNA MER1_type 13 206 -3 2123 102 20 3 chr5 175031813 175032106 -24598044 - AluSg SINE Alu -12 298 1 2717 180 9 34 chr5 175033176 175033480 -24596670 + Ricksha DNA DNA 91 378 -2868 2114 97 37 0 chr5 175033480 175033778 -24596372 + AluSx SINE Alu 1 309 -3 2717 180 9 34 chr5 175033778 175034001 -24596149 + Ricksha DNA DNA 378 605 -2641 475 169 0 13 chr5 175033990 175034067 -24596083 + Ricksha DNA DNA 2801 2876 -378 * 509 208 68 0 chr5 175034120 175034241 -24595909 - L1ME1 LINE L1 -1 6183 6048 5107 168 17 17 chr5 175034242 175034901 -24595249 + L1P LINE L1 3122 3783 -2363 1709 136 86 4 chr5 175034901 175035180 -24594970 + AluJb SINE Alu 1 302 -10 5107 168 17 17 chr5 175035180 175035476 -24594674 + L1P LINE L1 3782 4077 -2069 1793 131 10 13 chr5 175035476 175035774 -24594376 + Ricksha DNA DNA 2533 2829 -25 432 241 68 82 chr5 175035810 175036030 -24594120 + MIR SINE MIR 7 223 -39 2263 109 0 0 chr5 175036430 175036732 -24593418 - AluY SINE Alu -3 308 7 930 121 8 0 chr5 175036745 175036877 -24593273 - AluSq/x SINE Alu -180 133 1 1262 204 25 21 chr5 175036877 175037157 -24592993 + AluJo SINE Alu 27 307 -5 219 314 93 34 chr5 175037663 175037781 -24592369 + L2 LINE L2 3125 3249 -23 441 310 147 62 chr5 175037850 175038224 -24591926 - L2 LINE L2 0 3272 2867 666 148 35 14 chr5 175038294 175038436 -24591714 - Charlie5 DNA MER1_type 0 2618 2474 3817 133 28 12 chr5 175038439 175038643 -24591507 + L1PA15 LINE L1 5578 5777 -388 2026 138 3 0 chr5 175038643 175038949 -24591201 + AluSx SINE Alu 1 307 0 3817 133 28 12 chr5 175038949 175039316 -24590834 + L1PA15 LINE L1 5777 6159 -6 1204 266 33 46 chr5 175039320 175039559 -24590591 - L1M4 LINE L1 -1828 4318 4077 2211 121 13 0 chr5 175039559 175039857 -24590293 + AluSx SINE Alu 1 302 -10 1204 266 33 46 chr5 175039857 175040161 -24589989 - L1M4 LINE L1 -2069 4077 3782 452 159 156 113 chr5 175040168 175040343 -24589807 - MER33 DNA MER1_type -250 74 1 299 210 0 25 chr5 175041031 175041112 -24589038 + CT-rich Low_complexity Low_complexity 2 80 0 288 264 264 10 chr5 175041362 175041555 -24588595 - MIR SINE MIR -13 249 8 371 356 45 17 chr5 175041893 175042070 -24588080 + MIR SINE MIR 4 185 -77 1546 188 19 7 chr5 175042107 175042406 -24587744 + AluJb SINE Alu 9 310 0 233 146 21 0 chr5 175042829 175042877 -24587273 + A-rich Low_complexity Low_complexity 2 50 0 652 189 0 0 chr5 175043018 175043129 -24587021 - FLAM_C SINE Alu 0 143 33 232 217 0 14 chr5 175043129 175043198 -24586952 + L1ME4a LINE L1 6043 6110 -11 363 217 26 59 chr5 175043244 175043396 -24586754 + L1ME LINE L1 5644 5790 -331 560 301 134 28 chr5 175044648 175045392 -24584758 + L1MB4 LINE L1 5271 5857 -323 1612 275 70 29 chr5 175044702 175044997 -24585153 + L1MC4a LINE L1 5352 5633 -2175 1399 173 14 0 chr5 175044997 175045211 -24584939 - MER20 DNA MER1_type -2 217 1 1612 275 70 29 chr5 175045211 175045598 -24584552 + L1MC4a LINE L1 5633 6062 -1746 21 0 0 0 chr5 175045674 175045695 -24584455 + AT_rich Low_complexity Low_complexity 1 21 0 282 95 0 0 chr5 175046079 175046121 -24584029 + MADE1 DNA Mariner 39 80 0 470 265 25 12 chr5 175046257 175046419 -24583731 + MER113 DNA MER1_type? 1 164 -357 222 309 57 32 chr5 175047119 175047242 -24582908 + MIR SINE MIR 89 214 -48 433 292 16 38 chr5 175047526 175047711 -24582439 + MIR SINE MIR 82 262 0 1623 174 4 22 chr5 175047943 175048218 -24581932 - AluJo SINE Alu -30 282 13 309 234 39 13 chr5 175048233 175048310 -24581840 - MIR3 SINE MIR -24 184 106 26 30 0 0 chr5 175048515 175048548 -24581602 + AT_rich Low_complexity Low_complexity 1 33 0 213 286 91 13 chr5 175048559 175048636 -24581514 - MIR3 SINE MIR -44 164 82 320 297 72 36 chr5 175049189 175049384 -24580766 + L1ME LINE L1 5557 5758 -363 610 69 0 0 chr5 175049936 175050048 -24580102 + AluSg/x SINE Alu 210 321 0 486 298 105 42 chr5 175050103 175050617 -24579533 + L2 LINE L2 2610 3163 -109 277 111 270 0 chr5 175050618 175050681 -24579469 + MADE1 DNA Mariner 1 80 0 356 313 0 0 chr5 175050695 175050778 -24579372 + L2 LINE L2 3190 3272 0 2067 152 0 3 chr5 175051457 175051766 -24578384 - AluSx SINE Alu -4 308 1 494 250 0 77 chr5 175052142 175052298 -24577852 - L2 LINE L2 -1 3312 3169 793 197 95 0 chr5 175052385 175052547 -24577603 + AluJb SINE Alu 132 306 0 334 143 299 0 chr5 175052592 175052669 -24577481 - MER96 DNA MER1_type? -75 100 1 521 311 95 30 chr5 175052669 175052974 -24577176 - L2 LINE L2 -372 2942 2618 1662 173 30 33 chr5 175053063 175053363 -24576787 + AluJb SINE Alu 1 299 -13 265 300 24 147 chr5 175053781 175054114 -24576036 - L2 LINE L2 -1 3271 2980 291 289 103 0 chr5 175054770 175054867 -24575283 + L2 LINE L2 3207 3313 0 431 331 69 53 chr5 175055175 175055685 -24574465 - L2 LINE L2 -672 2642 2125 198 0 0 0 chr5 175056116 175056138 -24574012 + (CAAGG)n Simple_repeat Simple_repeat 1 22 0 198 323 113 38 chr5 175056564 175056697 -24573453 - MIR3 SINE MIR -61 147 5 394 243 79 13 chr5 175057299 175057451 -24572699 - L1ME3A LINE L1 -227 5943 5782 753 205 110 9 chr5 175057494 175057749 -24572401 - L1MA4 LINE L1 0 6291 6030 664 286 117 70 chr5 175058137 175059172 -24570978 - L1MEd LINE L1 -4749 1561 455 366 263 143 79 chr5 175060351 175060372 -24569778 - L1ME3A LINE L1 -255 5915 5897 1548 176 50 55 chr5 175060372 175060736 -24569414 + MLT1A1 LTR MaLR 4 365 0 366 263 143 79 chr5 175060736 175060777 -24569373 - L1ME3A LINE L1 -273 5897 5860 2363 136 21 9 chr5 175060777 175061109 -24569041 + MER1B DNA MER1_type 2 337 0 366 263 143 79 chr5 175061109 175061311 -24568839 - L1ME3A LINE L1 -310 5860 5633 1947 122 3 17 chr5 175061474 175061768 -24568382 + AluSx SINE Alu 1 290 -22 338 301 93 49 chr5 175061773 175061879 -24568271 - L1MEd LINE L1 -2413 3716 3616 1268 179 9 201 chr5 175061879 175062331 -24567819 + MLT1A1 LTR MaLR 1 365 0 338 301 93 49 chr5 175062331 175062450 -24567700 - L1MEd LINE L1 -2513 3616 3481 657 190 63 151 chr5 175062503 175062834 -24567316 - L1MC4 LINE L1 -270 7772 7471 385 276 79 16 chr5 175062834 175062961 -24567189 + MIR3 SINE MIR 74 208 0 1195 274 45 17 chr5 175063164 175063518 -24566632 - MLT1K LTR MaLR -94 494 131 582 266 106 2 chr5 175063542 175063852 -24566298 - MLT2E LTR ERVL -15 613 218 465 320 131 6 chr5 175063914 175064240 -24565910 - L2 LINE L2 -181 3091 2725 677 292 136 33 chr5 175064436 175064885 -24565265 - MLT1L LTR MaLR -17 598 104 281 116 0 0 chr5 175064902 175064945 -24565205 - MADE1 DNA Mariner 0 80 38 371 276 121 30 chr5 175064949 175065355 -24564795 - L1MEd LINE L1 -3192 2937 2495 22 0 0 0 chr5 175065504 175065526 -24564624 + AT_rich Low_complexity Low_complexity 1 22 0 30873 106 36 57 chr5 175065529 175071813 -24558337 - L1PA7 LINE L1 -6 6148 12 260 229 90 41 chr5 175072380 175072502 -24557648 - L1MEd LINE L1 -4927 1192 1065 1757 124 8 8 chr5 175072685 175072951 -24557199 + AluSc SINE Alu 39 304 -5 8041 102 54 21 chr5 175073293 175075165 -24554985 - L1PA8 LINE L1 -8 6164 4241 1912 137 3 39 chr5 175075165 175075472 -24554678 - AluSg SINE Alu -14 296 1 8041 102 54 21 chr5 175075472 175075617 -24554533 - L1PA8 LINE L1 -1931 4241 4102 390 241 116 58 chr5 175075891 175076098 -24554052 + MIR SINE MIR 1 219 -43 2247 116 0 0 chr5 175076335 175076636 -24553514 - AluSx SINE Alu -11 301 1 181 299 117 13 chr5 175076748 175076825 -24553325 + L2 LINE L2 3184 3268 -4 182 278 37 83 chr5 175077409 175077517 -24552633 - L2 LINE L2 -225 3047 2945 285 250 0 25 chr5 175077980 175078060 -24552090 - Charlie8 DNA MER1_type 0 2417 2340 361 268 65 30 chr5 175078066 175078234 -24551916 - Charlie8 DNA MER1_type -2141 276 103 341 302 55 50 chr5 175078641 175078823 -24551327 + MIR SINE MIR 79 261 -1 44537 41 8 3 chr5 175079751 175085872 -24544278 + L1PA3 LINE L1 4 6155 0 199 298 161 24 chr5 175085892 175086016 -24544134 - MIR3 SINE MIR -49 159 19 192 152 0 0 chr5 175086452 175086485 -24543665 + (CTA)n Simple_repeat Simple_repeat 1 33 0 594 223 0 0 chr5 175086538 175086641 -24543509 + MER6B DNA MER2_type 1 103 -173 276 262 0 0 chr5 175086621 175086682 -24543468 + MER6B DNA MER2_type 146 206 -4 * 697 231 26 13 chr5 175086683 175086839 -24543311 + MIR SINE MIR 4 161 -101 196 214 18 89 chr5 175087132 175087188 -24542962 - MIR SINE MIR -104 104 53 236 299 0 0 chr5 175087205 175087272 -24542878 - MIR SINE MIR -84 124 58 233 300 40 30 chr5 175087539 175087639 -24542511 - MIR SINE MIR -109 153 53 317 200 17 0 chr5 175087728 175087788 -24542362 + MER58 DNA MER1_type 2360 2420 0 220 303 83 28 chr5 175087788 175087897 -24542253 + L2 LINE L2 3196 3310 -3 503 254 186 17 chr5 175089476 175089653 -24540497 - MIR SINE MIR -48 214 8 216 277 113 47 chr5 175089715 175089822 -24540328 - MIR SINE MIR -97 111 3 276 259 99 0 chr5 175090268 175090349 -24539801 - L2 LINE L2 0 3272 3184 210 258 45 56 chr5 175090391 175090480 -24539670 - L3 LINE CR1 -143 1434 1347 345 214 64 100 chr5 175090585 175090689 -24539461 + MIR SINE MIR 110 209 -53 1067 98 262 6 chr5 175090689 175090872 -24539278 - MER30 DNA MER1_type 0 230 1 345 214 64 100 chr5 175090872 175090907 -24539243 + MIR SINE MIR 209 244 -18 302 235 25 62 chr5 175091560 175091641 -24538509 - L2 LINE L2 -7 3265 3188 216 67 0 0 chr5 175092027 175092057 -24538093 + (CA)n Simple_repeat Simple_repeat 2 31 0 464 188 24 0 chr5 175092077 175092117 -24538033 + MER3 DNA MER1_type 6 47 -162 261 163 0 125 chr5 175092117 175092197 -24537953 - MER3 DNA MER1_type 0 209 140 609 207 86 71 chr5 175092253 175092451 -24537699 - MER58C DNA MER1_type -14 201 1 23 54 0 0 chr5 175092525 175092562 -24537588 + AT_rich Low_complexity Low_complexity 1 37 0 299 316 63 0 chr5 175093105 175093200 -24536950 - L2 LINE L2 -33 3239 3139 187 305 66 89 chr5 175093249 175093472 -24536678 - L2 LINE L2 -256 3016 2791 360 294 42 58 chr5 175094772 175094933 -24535217 - MIR SINE MIR -62 146 38 661 227 163 51 chr5 175095092 175095254 -24534896 - MER113 DNA MER1_type? -85 436 294 7535 57 0 2 chr5 175095254 175096424 -24533726 - L1PA6 LINE L1 -4 6150 4984 661 227 163 51 chr5 175096424 175096653 -24533497 - MER113 DNA MER1_type? -227 294 1 2233 118 3 0 chr5 175096704 175097000 -24533150 - AluSx SINE Alu -15 297 1 1780 198 73 90 chr5 175097355 175097901 -24532249 + MLT1F LTR MaLR 1 537 -5 186 282 59 0 chr5 175097922 175098007 -24532143 - MIR SINE MIR -49 213 124 208 298 35 0 chr5 175098154 175098211 -24531939 - MIR3 SINE MIR -36 172 114 303 310 0 60 chr5 175099679 175099795 -24530355 + MIR3 SINE MIR 49 157 -51 237 208 38 19 chr5 175099888 175099941 -24530209 + L3 LINE CR1 1518 1571 -6 450 336 106 37 chr5 175100350 175100970 -24529180 - L2 LINE L2 -47 3225 2550 432 291 43 14 chr5 175102751 175102892 -24527258 + L2 LINE L2 3164 3308 -5 254 379 144 0 chr5 175104017 175104170 -24525980 - L2 LINE L2 -1 3271 3097 591 271 80 15 chr5 175104209 175104408 -24525742 - MIR SINE MIR -43 219 8 524 268 6 55 chr5 175104677 175104841 -24525309 - Charlie8 DNA MER1_type -2141 276 121 229 270 60 40 chr5 175105555 175105655 -24524495 + MER5A DNA MER1_type 3 104 -85 342 280 67 40 chr5 175107174 175107324 -24522826 + MIR3 SINE MIR 4 157 -51 418 245 68 27 chr5 175107380 175107527 -24522623 + MER103 DNA DNA 4 156 -10 619 311 53 13 chr5 175108509 175108734 -24521416 - MIR SINE MIR -11 251 18 517 227 91 40 chr5 175109267 175109443 -24520707 + MIR SINE MIR 63 247 -15 337 296 33 37 chr5 175109518 175109664 -24520486 - MIR3 SINE MIR -68 140 3 368 236 67 135 chr5 175110628 175110836 -24519314 - MER102b DNA MER1_type -11 330 137 357 340 19 9 chr5 175112070 175112176 -24517974 - MIR SINE MIR -82 126 20 471 252 76 86 chr5 175112345 175112555 -24517595 - MIR SINE MIR -44 218 11 356 304 61 20 chr5 175112802 175112950 -24517200 - MIR3 SINE MIR -25 183 30 285 203 220 34 chr5 175113025 175113143 -24517007 + L2 LINE L2 3168 3307 -6 470 295 91 38 chr5 175113708 175113918 -24516232 - MIR SINE MIR -35 227 7 562 238 166 7 chr5 175113922 175114073 -24516077 - MER5A DNA MER1_type -6 183 9 390 341 71 77 chr5 175114297 175114763 -24515387 + L2 LINE L2 2804 3266 -6 364 313 53 8 chr5 175116766 175116897 -24513253 + MER5B DNA MER1_type 5 141 -37 311 338 81 6 chr5 175117011 175117171 -24512979 - MIR SINE MIR -73 189 18 397 281 44 37 chr5 175117257 175117392 -24512758 - MIR3 SINE MIR -66 142 7 760 290 69 50 chr5 175118838 175119317 -24510833 - Charlie8 DNA MER1_type -1901 516 29 198 0 0 0 chr5 175119944 175119966 -24510184 + (T)n Simple_repeat Simple_repeat 1 22 0 6661 60 27 0 chr5 175120214 175121031 -24509119 + L1PA7 LINE L1 5315 6153 -1 809 282 116 17 chr5 175122293 175122881 -24507269 - L2 LINE L2 -3 3310 2653 201 121 0 0 chr5 175123769 175123802 -24506348 + (TG)n Simple_repeat Simple_repeat 2 34 0 1051 171 0 9 chr5 175124043 175124687 -24505463 + (TCCA)n Simple_repeat Simple_repeat 1 818 0 182 220 102 17 chr5 175124883 175124942 -24505208 + MIR SINE MIR 119 182 -80 269 305 84 0 chr5 175124970 175125065 -24505085 + MIR SINE MIR 109 211 -51 1291 236 57 34 chr5 175126596 175126977 -24503173 + MLT1D LTR MaLR 1 390 -115 2517 124 13 26 chr5 175126977 175127357 -24502793 - MER1A DNA MER1_type 0 529 155 587 205 34 0 chr5 175127393 175127510 -24502640 + MLT1D LTR MaLR 385 505 0 211 160 0 80 chr5 175127680 175127730 -24502420 - MIR SINE MIR -99 163 118 686 246 43 59 chr5 175128154 175128341 -24501809 + MER91B DNA MER1_type 2 185 -5 511 282 158 4 chr5 175128356 175128615 -24501535 - L2 LINE L2 -104 3209 2911 298 342 26 20 chr5 175128795 175128947 -24501203 - MIR3 SINE MIR -48 160 8 343 291 111 73 chr5 175129406 175129640 -24500510 + MIR SINE MIR 3 245 -17 1018 162 71 0 chr5 175129780 175129978 -24500172 + MER20 DNA MER1_type 6 217 -2 531 279 25 6 chr5 175130972 175131130 -24499020 - MIR SINE MIR 0 262 102 1707 100 12 4 chr5 175131892 175132162 -24497988 + MER41B LTR ERV1 166 480 -155 2362 87 0 3 chr5 175132162 175132461 -24497689 + AluSg SINE Alu 1 298 -12 1707 100 12 4 chr5 175132461 175132532 -24497618 + MER41B LTR ERV1 480 549 -86 572 266 206 5 chr5 175133103 175133302 -24496848 - MIR SINE MIR -15 247 9 254 336 107 8 chr5 175133381 175133503 -24496647 - MIR SINE MIR -97 165 32 611 215 98 19 chr5 175133577 175133920 -24496230 - MER113 DNA MER1_type? -117 404 8 991 154 70 106 chr5 175134191 175134418 -24495732 - MER20 DNA MER1_type 0 219 1 1466 99 90 0 chr5 175135553 175135764 -24494386 - MER30 DNA MER1_type 0 230 1 838 265 49 20 chr5 175135922 175136167 -24493983 - MIR SINE MIR -6 256 5 929 182 45 30 chr5 175136856 175137054 -24493096 + MER3 DNA MER1_type 9 209 0 2174 86 46 0 chr5 175137163 175137443 -24492707 + AluSx SINE Alu 1 293 -19 354 169 0 0 chr5 175137446 175137511 -24492639 + (TA)n Simple_repeat Simple_repeat 2 66 0 257 258 0 62 chr5 175137511 175137608 -24492542 - L1MC4 LINE L1 -1339 6703 6613 4524 100 14 3 chr5 175137635 175138257 -24491893 + PABL_A LTR ERV1 32 660 0 460 318 59 13 chr5 175138362 175138598 -24491552 - MIR SINE MIR -3 259 13 210 170 3 21 chr5 175138753 175138800 -24491350 + MIR SINE MIR 105 151 -62 1130 138 6 0 chr5 175139759 175139965 -24490185 - AluJ SINE Alu 0 328 122 644 99 65 3 chr5 175139977 175140275 -24489875 + (TA)n Simple_repeat Simple_repeat 1 316 0 302 253 46 23 chr5 175140275 175140362 -24489788 - L1MC4 LINE L1 -1338 6704 6616 327 165 22 11 chr5 175140363 175140454 -24489696 + (TA)n Simple_repeat Simple_repeat 1 92 0 704 166 9 21 chr5 175140607 175140849 -24489301 + (CATA)n Simple_repeat Simple_repeat 1 238 0 225 129 35 106 chr5 175140851 175140936 -24489214 + L1MC3 LINE L1 6569 6647 -1138 344 256 22 0 chr5 175140962 175141052 -24489098 - L1MC4 LINE L1 -1339 6703 6612 313 272 0 22 chr5 175140977 175141069 -24489081 + L1MC4 LINE L1 6614 6703 -1339 * 597 149 49 10 chr5 175141069 175141359 -24488791 + (TA)n Simple_repeat Simple_repeat 1 301 0 800 169 0 8 chr5 175141379 175141509 -24488641 - AluJ SINE Alu -183 129 1 193 196 0 22 chr5 175141774 175141820 -24488330 - MIR SINE MIR -7 255 211 213 121 0 0 chr5 175141935 175141968 -24488182 + (CAT)n Simple_repeat Simple_repeat 3 35 0 691 313 24 28 chr5 175142003 175142252 -24487898 - MIR SINE MIR -9 253 6 26 64 0 0 chr5 175142499 175142546 -24487604 + AT_rich Low_complexity Low_complexity 1 47 0 402 246 0 87 chr5 175144994 175145120 -24485030 + L2 LINE L2 3155 3269 -3 252 224 17 0 chr5 175145404 175145462 -24484688 + L2 LINE L2 3214 3272 0 409 282 113 60 chr5 175145800 175146197 -24483953 + MLT1K LTR MaLR 168 585 -3 2281 107 0 3 chr5 175146429 175146737 -24483413 + AluSg SINE Alu 1 307 -3 272 293 50 36 chr5 175147143 175147283 -24482867 + MIR SINE MIR 48 189 -73 330 267 160 20 chr5 175147387 175147537 -24482613 + L1MC4a LINE L1 6562 6732 -1076 2061 217 106 84 chr5 175147545 175148150 -24482000 + L1MC5 LINE L1 6834 7473 -488 2351 102 3 0 chr5 175148150 175148454 -24481696 + AluSp SINE Alu 1 305 -8 2061 217 106 84 chr5 175148454 175148893 -24481257 + L1MC5 LINE L1 7473 7901 -60 12321 30 9 0 chr5 175148896 175151043 -24479107 + L1PA4 LINE L1 3993 6151 -4 419 230 169 39 chr5 175151082 175151260 -24478890 + MIR SINE MIR 45 245 -17 578 216 183 26 chr5 175151800 175151953 -24478197 - MER5A DNA MER1_type 0 189 13 506 223 9 0 chr5 175152703 175152815 -24477335 + MER103 DNA DNA 9 121 -45 326 261 134 0 chr5 175153229 175153348 -24476802 + MIR SINE MIR 102 236 -26 209 326 34 79 chr5 175153434 175153612 -24476538 + MER5A DNA MER1_type 5 174 -15 2404 61 0 0 chr5 175154181 175154499 -24475651 + AluY SINE Alu 1 318 0 796 208 45 0 chr5 175154505 175154683 -24475467 + MIR SINE MIR 29 214 -48 1946 134 17 7 chr5 175155192 175155491 -24474659 + AluSx SINE Alu 1 302 -10 272 184 0 0 chr5 175155493 175155542 -24474608 - MER112 DNA MER1_type -98 162 114 224 204 0 0 chr5 175155581 175155625 -24474525 + (TG)n Simple_repeat Simple_repeat 2 45 0 270 318 54 16 chr5 175155964 175156093 -24474057 - MIR SINE MIR -12 250 117 797 281 23 12 chr5 175156488 175156744 -24473406 - MIR SINE MIR -2 260 2 275 94 12 235 chr5 175156799 175156853 -24473297 + Alu SINE Alu 240 247 -55 1838 137 48 14 chr5 175156853 175157146 -24473004 - AluSq SINE Alu -8 305 3 275 94 12 235 chr5 175157146 175157176 -24472974 + Alu SINE Alu 247 282 -20 479 250 109 0 chr5 175157458 175157586 -24472564 + MIR SINE MIR 70 211 -51 2576 75 0 0 chr5 175158129 175158437 -24471713 + AluSg SINE Alu 1 308 -2 418 324 139 14 chr5 175158930 175159146 -24471004 - MIR SINE MIR -17 245 3 568 298 133 42 chr5 175159155 175159214 -24470936 - L3 LINE CR1 -108 1469 1417 2360 104 0 0 chr5 175159214 175159521 -24470629 - AluSx SINE Alu -5 307 1 568 298 133 42 chr5 175159521 175159861 -24470289 - L3 LINE CR1 -160 1417 1034 2022 94 10 45 chr5 175160525 175160833 -24469317 - L1MA2 LINE L1 0 6304 6008 182 262 0 0 chr5 175162982 175163024 -24467126 + MIR SINE MIR 50 91 -171 370 155 42 0 chr5 175164086 175164157 -24465993 - MIR SINE MIR -108 154 81 251 200 106 47 chr5 175164917 175165002 -24465148 - MIR SINE MIR -6 256 167 1854 120 12 0 chr5 175165622 175165880 -24464270 + AluSx SINE Alu 1 261 -51 204 40 0 0 chr5 175165881 175165906 -24464244 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 434 311 47 5 chr5 175165916 175166109 -24464041 - MIR SINE MIR -15 247 47 291 282 115 40 chr5 175166202 175166376 -24463774 - MIR SINE MIR -41 221 35 21 36 0 0 chr5 175166560 175166588 -24463562 + AT_rich Low_complexity Low_complexity 1 28 0 231 308 18 122 chr5 175166696 175166917 -24463233 + L2 LINE L2 2977 3174 -98 448 311 109 29 chr5 175167946 175168431 -24461719 + MLT1L LTR MaLR 90 613 -2 243 243 29 0 chr5 175168431 175168501 -24461649 + MER103 DNA DNA 30 101 -65 424 284 43 0 chr5 175168553 175168694 -24461456 - MIR3 SINE MIR -48 160 14 409 228 89 0 chr5 175168748 175168849 -24461301 + FLAM_A SINE Alu 1 110 -32 534 246 6 44 chr5 175169048 175169231 -24460919 + Charlie8 DNA MER1_type 90 265 -2152 2585 54 0 6 chr5 175170002 175170315 -24459835 + AluY SINE Alu 1 311 0 551 306 100 13 chr5 175171488 175171717 -24458433 - MIR SINE MIR -12 250 2 215 254 0 32 chr5 175172410 175172473 -24457677 + CT-rich Low_complexity Low_complexity 1 61 0 1052 208 14 0 chr5 175172995 175173211 -24456939 - MER20 DNA MER1_type 0 219 1 1265 113 5 5 chr5 175173680 175173875 -24456275 - L1PB1 LINE L1 -1 6150 5956 329 344 138 26 chr5 175173909 175174098 -24456052 + MIR SINE MIR 41 250 -12 327 314 57 64 chr5 175174469 175174609 -24455541 + L2 LINE L2 3134 3272 0 1791 166 0 3 chr5 175174726 175175015 -24455135 + AluSx SINE Alu 1 288 -24 721 97 62 0 chr5 175175448 175175561 -24454589 + LTR26B LTR ERV1 73 192 -339 235 284 9 73 chr5 175175787 175175896 -24454254 + MIR SINE MIR 99 200 -62 11414 79 1 3 chr5 175176249 175178616 -24451534 + L1PA7 LINE L1 3766 6154 0 668 175 39 13 chr5 175179467 175179621 -24450529 + L1MC4 LINE L1 7218 7375 -667 3010 142 101 5 chr5 175179628 175180191 -24449959 + LTR26E LTR ERV1 1 617 -5 1105 251 135 14 chr5 175180194 175180624 -24449526 + L1MC4 LINE L1 7377 7858 -184 477 0 0 0 chr5 175180648 175180701 -24449449 + (CA)n Simple_repeat Simple_repeat 2 54 0 338 298 124 36 chr5 175180708 175180860 -24449290 - L2 LINE L2 -217 3055 2875 1944 140 59 12 chr5 175180860 175181182 -24448968 - MER1B DNA MER1_type 0 337 1 338 298 124 36 chr5 175181182 175181254 -24448896 - L2 LINE L2 -397 2875 2811 206 229 0 21 chr5 175181955 175182003 -24448147 - L2 LINE L2 0 3313 3267 2132 146 108 32 chr5 175182119 175182593 -24447557 - LTR54 LTR ERV1 0 510 1 374 106 0 15 chr5 175182711 175182777 -24447373 + (TG)n Simple_repeat Simple_repeat 2 66 0 2027 112 10 14 chr5 175183358 175183654 -24446496 - AluSx SINE Alu -17 295 1 449 370 105 15 chr5 175185214 175185622 -24444528 + L2 LINE L2 2152 2596 -718 22 0 0 0 chr5 175185648 175185670 -24444480 + AT_rich Low_complexity Low_complexity 1 22 0 348 278 43 16 chr5 175186138 175186263 -24443887 + MER5A DNA MER1_type 22 167 -22 289 311 16 25 chr5 175186175 175186297 -24443853 - MER5A DNA MER1_type -68 121 1 * 24 0 0 0 chr5 175187137 175187161 -24442989 + AT_rich Low_complexity Low_complexity 1 24 0 617 241 83 7 chr5 175187500 175187645 -24442505 + MIR3 SINE MIR 38 193 -15 663 293 102 33 chr5 175188027 175188457 -24441693 + L2 LINE L2 2285 2744 -570 231 164 14 27 chr5 175189028 175189101 -24441049 + GA-rich Low_complexity Low_complexity 3 74 0 253 71 24 24 chr5 175189159 175189201 -24440949 + MER4A LTR ERV1 54 95 -569 1673 137 3 62 chr5 175189203 175189569 -24440581 + MER4A LTR ERV1 261 663 -1 329 276 104 18 chr5 175189627 175189790 -24440360 - MIR SINE MIR -78 184 8 513 245 62 47 chr5 175189864 175190056 -24440094 + MER77 LTR ERV1 54 248 -357 3228 110 33 39 chr5 175190082 175190654 -24439496 + LTR34 LTR ERV1 3 571 -128 760 197 7 0 chr5 175190823 175190965 -24439185 + LTR34 LTR ERV1 556 698 -1 1037 261 37 12 chr5 175190968 175191290 -24438860 + MER77 LTR ERV1 276 605 0 423 318 5 46 chr5 175191544 175191739 -24438411 + MIR3 SINE MIR 20 206 -2 308 352 96 5 chr5 175192679 175192878 -24437272 - MIR SINE MIR -29 233 17 288 307 0 0 chr5 175192930 175193005 -24437145 - MIR SINE MIR -114 148 74 1266 247 79 31 chr5 175194108 175194898 -24435252 + L1ME LINE L1 441 1285 -5087 * 2652 166 8 2 chr5 175194888 175195417 -24434733 - L1 LINE L1 -1008 5138 4607 747 192 13 20 chr5 175195417 175195568 -24434582 - FRAM SINE Alu -13 163 14 1234 174 11 0 chr5 175195569 175195844 -24434306 - L1 LINE L1 -1534 4612 4335 370 282 77 28 chr5 175195850 175196145 -24434005 + L1ME LINE L1 1185 1648 -4915 202 229 57 14 chr5 175196152 175196222 -24433928 + (CATATA)n Simple_repeat Simple_repeat 6 78 0 228 93 0 37 chr5 175196226 175196280 -24433870 - L1MC4 LINE L1 -1339 6703 6652 760 260 48 93 chr5 175196302 175196397 -24433753 + L1ME LINE L1 1706 1804 -4759 2260 108 0 13 chr5 175196397 175196702 -24433448 + AluSc SINE Alu 1 301 -8 760 260 48 93 chr5 175196702 175197420 -24432730 + L1ME LINE L1 1804 2482 -4081 10297 169 35 9 chr5 175197464 175199055 -24431095 + L1M1 LINE L1 3289 4966 -2599 2290 89 7 0 chr5 175199055 175199346 -24430804 + AluSg SINE Alu 1 293 -17 10297 169 35 9 chr5 175199346 175200263 -24429887 + L1M1 LINE L1 4966 5858 -1707 4067 249 111 16 chr5 175200275 175202196 -24427954 + L1ME LINE L1 2602 4706 -1676 255 195 62 97 chr5 175202518 175202631 -24427519 + L1MC4a LINE L1 7049 7157 -651 586 294 98 8 chr5 175202883 175203128 -24427022 - L3 LINE CR1 -115 1462 1196 186 340 19 0 chr5 175203914 175203967 -24426183 + MIR SINE MIR 19 72 -136 334 260 136 45 chr5 175204402 175204556 -24425594 - MIR SINE MIR -10 252 85 198 333 39 13 chr5 175204543 175204621 -24425529 + MIR SINE MIR 48 127 -81 * 724 321 12 29 chr5 175205541 175205784 -24424366 - MIR SINE MIR -16 246 8 22 35 0 0 chr5 175205857 175205886 -24424264 + AT_rich Low_complexity Low_complexity 1 29 0 1013 200 0 45 chr5 175206290 175206510 -24423640 + MER20 DNA MER1_type 7 216 -3 385 225 291 28 chr5 175207450 175207632 -24422518 + MIR SINE MIR 8 237 -25 311 227 13 13 chr5 175208178 175208253 -24421897 + MIR SINE MIR 39 113 -149 283 282 35 0 chr5 175208253 175208338 -24421812 - MIR SINE MIR -82 126 39 450 292 0 19 chr5 175208338 175208492 -24421658 + Charlie8 DNA MER1_type 1 151 -2266 2249 130 0 0 chr5 175208894 175209202 -24420948 - AluSx SINE Alu -4 308 1 432 265 130 16 chr5 175209236 175209421 -24420729 - MIR SINE MIR -6 256 51 625 208 75 133 chr5 175209434 175209781 -24420369 + MER102a DNA MER1_type 1 327 -3 1590 206 89 9 chr5 175209874 175210302 -24419848 + MLT1C LTR MaLR 6 467 0 26 0 0 0 chr5 175211348 175211374 -24418776 + AT_rich Low_complexity Low_complexity 1 26 0 395 338 103 0 chr5 175211398 175211602 -24418548 - MIR SINE MIR -18 244 20 226 277 88 88 chr5 175212007 175212155 -24417995 - MIR SINE MIR -70 192 45 236 332 139 59 chr5 175212871 175213695 -24416455 + L2 LINE L2 2370 3261 -11 29 28 0 0 chr5 175214397 175214433 -24415717 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr5 175214824 175214855 -24415295 + AT_rich Low_complexity Low_complexity 1 31 0 27 29 0 0 chr5 175215394 175215428 -24414722 + AT_rich Low_complexity Low_complexity 1 34 0 1495 152 28 50 chr5 175215433 175215706 -24414444 - Tigger1 DNA MER2_type -1 2417 2151 1868 143 45 0 chr5 175215706 175215993 -24414157 - AluSq SINE Alu -13 300 1 1495 152 28 50 chr5 175215993 175216041 -24414109 - Tigger1 DNA MER2_type -267 2151 2103 1091 172 0 0 chr5 175216029 175216215 -24413935 - Tigger1 DNA MER2_type -922 1496 1311 * 654 196 54 0 chr5 175216229 175216341 -24413809 - AluJo/FRAM SINE Alu -30 282 165 1220 193 41 37 chr5 175216341 175216585 -24413565 - AluJo SINE Alu -67 245 1 7724 125 7 53 chr5 175216589 175217143 -24413007 - Tigger1 DNA MER2_type -1098 1320 742 2392 92 7 0 chr5 175217143 175217446 -24412704 - AluY SINE Alu -6 305 1 1269 169 0 136 chr5 175217452 175217790 -24412360 - AluJb SINE Alu -20 292 1 7724 125 7 53 chr5 175217790 175218612 -24411538 - Tigger1 DNA MER2_type -1681 737 1 22 80 0 0 chr5 175218614 175218664 -24411486 + AT_rich Low_complexity Low_complexity 1 50 0 906 142 96 35 chr5 175218846 175219043 -24411107 - L1MD3 LINE L1 -5 7990 7782 2125 110 0 3 chr5 175219162 175219479 -24410671 - AluSx SINE Alu 0 312 1 259 342 83 27 chr5 175221126 175221500 -24408650 + L1ME LINE L1 4763 5157 -989 426 305 22 35 chr5 175221594 175221820 -24408330 + L1ME LINE L1 5310 5532 -589 43954 32 21 1 chr5 175221837 175227868 -24402282 - L1HS LINE L1 0 6155 3 2052 125 0 0 chr5 175227917 175228237 -24401913 - AluSg1 SINE Alu 0 320 1 436 256 79 15 chr5 175228260 175228469 -24401681 + L1ME LINE L1 5598 5818 -344 905 202 37 49 chr5 175228509 175228752 -24401398 - MIR SINE MIR -15 247 8 655 241 54 111 chr5 175228845 175229161 -24400989 - MLT1J LTR MaLR -9 502 205 672 331 16 8 chr5 175229791 175230039 -24400111 - MIR SINE MIR -11 251 2 2690 150 13 33 chr5 175230648 175231100 -24399050 - MSTB2 LTR MaLR 0 457 15 208 250 100 38 chr5 175231104 175231184 -24398966 + L2 LINE L2 3146 3230 -42 530 70 0 105 chr5 175231298 175231347 -24398803 - MADE1 DNA Mariner 0 80 42 2440 62 0 0 chr5 175231347 175231635 -24398515 + AluY SINE Alu 1 288 -23 530 70 0 105 chr5 175231635 175231671 -24398479 - MADE1 DNA Mariner -38 42 4 195 280 93 47 chr5 175231675 175231782 -24398368 + L2 LINE L2 3160 3271 -1 385 287 140 0 chr5 175231960 175232124 -24398026 - MIR SINE MIR -29 233 47 638 243 129 15 chr5 175234135 175234337 -24395813 + MIR SINE MIR 33 257 -5 519 318 40 5 chr5 175235427 175235628 -24394522 - L2 LINE L2 -8 3305 3098 521 230 43 14 chr5 175235647 175235786 -24394364 - MIR SINE MIR -27 235 93 343 227 92 134 chr5 175235796 175236034 -24394116 + L2 LINE L2 2413 2640 -674 2913 100 27 2 chr5 175236053 175236464 -24393686 + L1PA13 LINE L1 5687 6107 -56 921 241 0 0 chr5 175236484 175236650 -24393500 - FRAM SINE Alu 0 166 1 279 250 60 0 chr5 175236653 175236737 -24393413 + L2 LINE L2 2694 2782 -532 416 323 132 20 chr5 175236815 175237066 -24393084 + L2 LINE L2 2805 3083 -230 321 318 17 29 chr5 175338053 175338226 -24291924 - MIR SINE MIR -10 252 82 209 208 0 0 chr5 175338226 175338274 -24291876 + (CAT)n Simple_repeat Simple_repeat 2 49 0 280 261 37 52 chr5 175338369 175338503 -24291647 - MIR SINE MIR -31 231 100 2365 61 7 7 chr5 175339031 175339325 -24290825 - AluY SINE Alu -17 294 1 347 194 0 0 chr5 175339585 175339652 -24290498 + MLT1C LTR MaLR 35 101 -366 1608 171 15 94 chr5 175339685 175340088 -24290062 + MLT1B LTR MaLR 18 388 -2 1668 179 36 20 chr5 175340090 175340447 -24289703 + MLT1C LTR MaLR 97 459 -8 2240 228 79 9 chr5 175341218 175341875 -24288275 - L1ME3A LINE L1 -10 6160 5458 645 304 95 5 chr5 175342781 175343079 -24287071 + L2 LINE L2 2723 3046 -226 2141 125 10 0 chr5 175343156 175343459 -24286691 - AluSx SINE Alu -6 306 1 408 125 0 0 chr5 175343521 175343585 -24286565 + (TG)n Simple_repeat Simple_repeat 2 65 0 214 324 15 0 chr5 175343597 175343665 -24286485 + L2 LINE L2 3245 3313 0 1870 284 76 56 chr5 175343868 175344030 -24286120 + L1M4b LINE L1 -567 4294966886 -6694 2086 122 6 13 chr5 175344030 175344342 -24285808 + AluY SINE Alu 1 310 -1 1870 284 76 56 chr5 175344342 175344965 -24285185 + L1M4b LINE L1 -410 234 -6050 1341 258 13 25 chr5 175344973 175345449 -24284701 + L1M4b LINE L1 1301 1919 -4644 1508 234 13 16 chr5 175345606 175346058 -24284092 - L1 LINE L1 -2759 4103 3653 2036 126 9 3 chr5 175346062 175346388 -24283762 - MER51B LTR ERV1 0 377 50 448 109 152 11 chr5 175346404 175346496 -24283654 - MER51A LTR ERV1 -529 105 1 6666 126 48 41 chr5 175346499 175348481 -24281669 - L1PBa LINE L1 -3213 3649 1656 190 328 0 30 chr5 175348739 175348806 -24281344 - L2 LINE L2 -18 3295 3231 310 254 50 77 chr5 175349817 175349998 -24280152 - MER5A DNA MER1_type -4 185 10 1421 311 105 38 chr5 175350369 175351227 -24278923 + L2 LINE L2 2136 3077 -195 1006 202 31 27 chr5 175351227 175351450 -24278700 - MER58A DNA MER1_type 0 224 1 1421 311 105 38 chr5 175351450 175351659 -24278491 + L2 LINE L2 3077 3271 -1 2290 126 0 0 chr5 175351758 175352067 -24278083 - AluSg SINE Alu -1 309 1 3250 209 32 21 chr5 175352969 175353649 -24276501 + L1M4b LINE L1 2459 3151 -3231 2009 165 0 3 chr5 175353649 175353958 -24276192 + AluJo SINE Alu 5 312 0 3250 209 32 21 chr5 175353958 175354077 -24276073 + L1M4b LINE L1 3151 3267 -3115 716 205 0 0 chr5 175354068 175354234 -24275916 + L1M4b LINE L1 3541 3706 -2676 * 1315 150 3 68 chr5 175354251 175354545 -24275605 - L1 LINE L1 -1168 4978 4704 * 6352 136 20 9 chr5 175354544 175356293 -24273857 + L1MA1 LINE L1 4480 6256 -46 394 192 29 0 chr5 175356296 175356400 -24273750 + L1M4b LINE L1 4309 4415 -1967 513 101 13 0 chr5 175356543 175356622 -24273528 + L1MA1 LINE L1 6177 6256 -46 6219 142 27 2 chr5 175356622 175356946 -24273204 + L1PB1 LINE L1 4070 4385 -1766 189 0 0 0 chr5 175356946 175356967 -24273183 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 6219 142 27 2 chr5 175356967 175358317 -24271833 + L1PB1 LINE L1 4385 5810 -341 321 26 0 0 chr5 175358317 175358355 -24271795 + (TA)n Simple_repeat Simple_repeat 1 38 0 6219 142 27 2 chr5 175358355 175358700 -24271450 + L1PB1 LINE L1 5810 6145 -6 356 69 17 0 chr5 175358714 175358772 -24271378 + L1MA2 LINE L1 6246 6304 0 861 221 30 4 chr5 175358981 175359212 -24270938 + L1MA7 LINE L1 5711 5947 -344 959 324 109 61 chr5 175359360 175360354 -24269796 + L2 LINE L2 2215 3271 -1 2292 139 49 22 chr5 175360363 175360774 -24269376 + MSTC LTR MaLR 1 422 -6 390 286 84 38 chr5 175361065 175361327 -24268823 - L1MC4 LINE L1 -70 7972 7699 666 271 108 40 chr5 175361452 175361850 -24268300 + MLT1J2 LTR MaLR 4 428 -22 211 250 167 62 chr5 175362920 175363016 -24267134 - MIR SINE MIR -1 261 156 360 309 55 73 chr5 175363398 175363673 -24266477 - L2 LINE L2 -95 3177 2908 651 275 33 24 chr5 175364013 175364224 -24265926 + MIR SINE MIR 49 261 -1 232 269 47 90 chr5 175364876 175365088 -24265062 - L2 LINE L2 -883 2431 2229 1257 86 0 17 chr5 175365128 175365303 -24264847 + AluY SINE Alu 43 214 -97 201 138 0 0 chr5 175366577 175366606 -24263544 + (ATGGTG)n Simple_repeat Simple_repeat 4 32 0 787 201 32 133 chr5 175366613 175366891 -24263259 - MIR SINE MIR -11 251 2 342 272 26 0 chr5 175366960 175367074 -24263076 + MLT1K LTR MaLR 450 566 -22 383 204 187 99 chr5 175367154 175367438 -24262712 - L1ME4a LINE L1 -12 6109 5801 222 229 21 0 chr5 175367439 175367487 -24262663 + (TG)n Simple_repeat Simple_repeat 2 50 0 477 306 13 57 chr5 175368526 175368755 -24261395 - MIR SINE MIR -2 260 42 219 403 54 0 chr5 175369021 175369150 -24261000 - L2 LINE L2 -254 3018 2883 653 274 78 33 chr5 175369303 175369548 -24260602 + L2 LINE L2 3058 3313 0 667 233 85 0 chr5 175369784 175369960 -24260190 - MER117 DNA MER1_type -3 194 4 602 307 51 39 chr5 175370110 175370297 -24259853 + MIR SINE MIR 6 198 -64 1868 168 0 20 chr5 175370297 175370600 -24259550 + AluJb SINE Alu 1 297 -15 602 307 51 39 chr5 175370600 175370666 -24259484 + MIR SINE MIR 198 262 0 286 291 8 51 chr5 175371066 175371183 -24258967 + MIR SINE MIR 95 206 -56 2568 177 19 12 chr5 175371792 175372211 -24257939 + MSTB LTR MaLR 1 422 -4 8892 173 33 25 chr5 175372215 175373838 -24256312 + MSTB-int LTR MaLR 1 1637 -14 2540 164 18 48 chr5 175373851 175374290 -24255860 + MSTB LTR MaLR 1 426 0 920 277 95 26 chr5 175374315 175374694 -24255456 - MLT1I LTR MaLR 0 409 5 228 35 0 0 chr5 175375344 175375373 -24254777 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 378 0 0 0 chr5 175375372 175375414 -24254736 + (TG)n Simple_repeat Simple_repeat 1 42 0 536 259 103 73 chr5 175375500 175375752 -24254398 + MIR SINE MIR 14 261 -1 200 328 0 16 chr5 175375800 175375864 -24254286 - L3 LINE CR1 -521 1056 994 976 337 63 33 chr5 175375910 175376462 -24253688 - MLT1K LTR MaLR -18 570 2 305 291 27 9 chr5 175376526 175376636 -24253514 - MER117 DNA MER1_type -10 187 76 3630 202 34 26 chr5 175376795 175377552 -24252598 + L1M1 LINE L1 130 892 -6673 4048 191 25 99 chr5 175377697 175378444 -24251706 + L1M1 LINE L1 860 1504 -6061 270 0 0 0 chr5 175378444 175378474 -24251676 + (TTTAA)n Simple_repeat Simple_repeat 3 32 0 4048 191 25 99 chr5 175378474 175378801 -24251349 + L1M1 LINE L1 1504 1854 -5711 2940 108 36 10 chr5 175378802 175379219 -24250931 - MSTA LTR MaLR 0 428 1 3606 163 31 3 chr5 175379219 175379825 -24250325 - MSTA-int LTR MaLR 0 1651 1029 2161 144 47 8 chr5 175379826 175380187 -24249963 + THE1C LTR MaLR 1 375 0 2720 108 110 101 chr5 175380187 175380749 -24249401 + THE1C-int LTR MaLR 1 567 -1013 437 234 122 54 chr5 175381932 175382137 -24248013 - MIR SINE MIR -42 220 2 789 208 45 6 chr5 175382664 175382842 -24247308 + L1MB5 LINE L1 5990 6174 0 392 296 19 49 chr5 175383891 175384053 -24246097 - MIR SINE MIR -46 216 60 308 335 84 11 chr5 175384997 175385176 -24244974 + MER117 DNA MER1_type 3 194 -3 211 257 71 43 chr5 175386168 175386238 -24243912 + MIR3 SINE MIR 86 157 -51 877 249 56 24 chr5 175386239 175386452 -24243698 - MER58A DNA MER1_type 0 224 5 1117 193 43 43 chr5 175386510 175386810 -24243340 - MER33 DNA MER1_type -23 301 2 1780 118 20 109 chr5 175386824 175387171 -24242979 - AluYb8 SINE Alu -2 316 1 184 302 0 0 chr5 175388755 175388798 -24241352 - L2 LINE L2 -13 3259 3217 279 302 22 25 chr5 175388823 175388966 -24241184 - MIR SINE MIR -63 145 1 3163 213 43 63 chr5 175390187 175391026 -24239124 - MER21B LTR ERV1 -6 925 1 458 301 105 9 chr5 175391084 175391313 -24238837 - MIR SINE MIR -10 252 2 532 258 63 44 chr5 175391449 175391868 -24238282 - MLT1H LTR MaLR -10 545 75 321 321 15 8 chr5 175392138 175392269 -24237881 + L1ME3A LINE L1 4211 4342 -1804 549 283 59 6 chr5 175392280 175392543 -24237607 + L1ME3A LINE L1 5646 5925 -241 21 0 0 0 chr5 175392589 175392610 -24237540 + AT_rich Low_complexity Low_complexity 1 21 0 2707 156 56 4 chr5 175392874 175393335 -24236815 - MER31A LTR ERV1 0 485 1 1001 316 59 19 chr5 175393801 175394222 -24235928 + MLT1K LTR MaLR 2 439 -149 336 294 164 12 chr5 175394358 175394530 -24235620 + MIR SINE MIR 66 262 0 359 311 74 22 chr5 175395217 175395352 -24234798 + MER117 DNA MER1_type 9 150 -47 213 255 0 0 chr5 175395740 175395787 -24234363 - MIR SINE MIR -62 146 100 370 338 68 0 chr5 175396235 175396368 -24233782 - L2 LINE L2 -27 3245 3104 216 368 23 11 chr5 175396531 175396618 -24233532 - L2 LINE L2 0 3272 3185 453 325 86 5 chr5 175397038 175397235 -24232915 + MIR SINE MIR 36 248 -14 26 64 0 0 chr5 175397349 175397396 -24232754 + AT_rich Low_complexity Low_complexity 1 47 0 287 247 130 39 chr5 175397464 175397618 -24232532 - L1MC4 LINE L1 -74 7968 7801 3378 247 65 6 chr5 175397869 175398641 -24231509 + L1M4 LINE L1 2687 3531 -2615 351 0 0 0 chr5 175398641 175398680 -24231470 + (CA)n Simple_repeat Simple_repeat 2 40 0 3378 247 65 6 chr5 175398680 175398888 -24231262 + L1M4 LINE L1 3531 3725 -2421 3312 172 2 7 chr5 175398880 175399467 -24230683 - L1P LINE L1 -1584 4562 3979 * 2793 238 42 35 chr5 175399867 175401792 -24228358 + L1MEc LINE L1 1868 3841 -2374 973 285 94 75 chr5 175402310 175402692 -24227458 - MLT1L LTR MaLR 0 615 215 2410 175 28 19 chr5 175402692 175403121 -24227029 - Tigger2a DNA MER2_type -1 433 1 973 285 94 75 chr5 175403121 175403341 -24226809 - MLT1L LTR MaLR -400 215 1 503 365 0 34 chr5 175403574 175403739 -24226411 - MIR SINE MIR -18 244 88 9556 169 83 24 chr5 175403739 175405395 -24224755 + MER52A LTR ERV1 1 1755 0 503 365 0 34 chr5 175405395 175405467 -24224683 - MIR SINE MIR -174 88 15 844 181 5 108 chr5 175405947 175406151 -24223999 + MER20 DNA MER1_type 36 218 -1 542 127 13 0 chr5 175406638 175406717 -24223433 + MADE1 DNA Mariner 1 80 0 583 226 19 38 chr5 175409297 175409456 -24220694 - MER5A DNA MER1_type -3 186 31 465 232 71 52 chr5 175409633 175409788 -24220362 + MIR SINE MIR 54 211 -51 1384 122 15 0 chr5 175411028 175411225 -24218925 - AluSc SINE Alu -10 299 100 2638 40 0 0 chr5 175411561 175411864 -24218286 + AluY SINE Alu 1 303 -8 954 175 165 10 chr5 175411893 175412087 -24218063 + MER58A DNA MER1_type 1 224 0 254 339 80 21 chr5 175412432 175412671 -24217479 + L2 LINE L2 1722 1974 -1340 1738 149 48 0 chr5 175412734 175413049 -24217101 - L1MA7 LINE L1 0 6291 5962 2073 169 3 0 chr5 175413062 175413428 -24216722 + L1M2 LINE L1 5254 5620 -671 1107 159 0 0 chr5 175413428 175413598 -24216552 + AluSx SINE Alu 1 170 -142 295 298 78 0 chr5 175414519 175414660 -24215490 - MER103 DNA DNA -1 165 14 228 182 108 35 chr5 175414975 175415061 -24215089 + MIR SINE MIR 73 166 -62 2082 113 17 17 chr5 175415262 175415564 -24214586 + AluSx SINE Alu 1 302 -10 260 281 34 55 chr5 175415896 175416042 -24214108 - MLT1I LTR MaLR -266 143 1 27 0 0 0 chr5 175416703 175416730 -24213420 + AT_rich Low_complexity Low_complexity 1 27 0 853 177 44 6 chr5 175416774 175416955 -24213195 + MER53 DNA DNA 2 189 0 198 250 0 0 chr5 175417481 175417537 -24212613 + A-rich Low_complexity Low_complexity 1 56 0 351 0 0 0 chr5 175417658 175417697 -24212453 + (CA)n Simple_repeat Simple_repeat 2 40 0 189 0 0 0 chr5 175417715 175417736 -24212414 + (CA)n Simple_repeat Simple_repeat 2 22 0 192 40 0 0 chr5 175417826 175417851 -24212299 + (CA)n Simple_repeat Simple_repeat 2 26 0 201 158 0 0 chr5 175417920 175417958 -24212192 + A-rich Low_complexity Low_complexity 1 38 0 1122 55 0 0 chr5 175418728 175418855 -24211295 - L1PA10 LINE L1 -14 6154 6028 29 28 0 0 chr5 175418858 175418894 -24211256 + AT_rich Low_complexity Low_complexity 1 36 0 367 322 8 50 chr5 175419074 175419206 -24210944 - MIR SINE MIR -56 152 24 424 299 81 82 chr5 175420413 175420860 -24209290 + L2 LINE L2 2776 3218 -54 405 274 40 0 chr5 175420984 175421108 -24209042 + MIR SINE MIR 39 167 -95 2265 116 3 7 chr5 175421109 175421419 -24208731 + AluSx SINE Alu 1 309 -3 22 35 0 0 chr5 175421444 175421473 -24208677 + AT_rich Low_complexity Low_complexity 1 29 0 355 362 105 24 chr5 175421948 175422368 -24207782 + L2 LINE L2 2858 3311 -2 568 279 57 82 chr5 175423255 175423499 -24206651 - MER102a DNA MER1_type -1 329 92 6539 106 6 12 chr5 175423940 175425047 -24205103 + L1PA16 LINE L1 4422 5547 -619 2981 128 18 9 chr5 175425047 175425491 -24204659 + MER83 LTR ERV1 1 448 0 6539 106 6 12 chr5 175425491 175426103 -24204047 + L1PA16 LINE L1 5547 6161 -5 24 0 0 0 chr5 175426131 175426155 -24203995 + AT_rich Low_complexity Low_complexity 1 24 0 304 351 64 16 chr5 175426156 175426407 -24203743 + L2 LINE L2 2015 2277 -1037 301 375 92 4 chr5 175426407 175426658 -24203492 + L2 LINE L2 2589 2861 -453 23 0 0 0 chr5 175426778 175426801 -24203349 + AT_rich Low_complexity Low_complexity 1 23 0 599 267 0 0 chr5 175427254 175427385 -24202765 - MIR SINE MIR -47 215 85 189 292 0 0 chr5 175428229 175428277 -24201873 + MIR3 SINE MIR 122 169 -39 2820 10 22 0 chr5 175428624 175428935 -24201215 + AluYb8 SINE Alu 1 318 0 515 298 19 0 chr5 175429756 175429914 -24200236 + MIR SINE MIR 100 260 -2 235 35 0 0 chr5 175429965 175429994 -24200156 - MADE1 DNA Mariner -30 50 22 401 254 26 119 chr5 175430264 175430575 -24199575 - MER52A LTR ERV1 -1386 369 88 234 364 61 0 chr5 175431219 175431351 -24198799 + MIR SINE MIR 123 262 0 1352 301 73 31 chr5 175431983 175432528 -24197622 - MLT1K LTR MaLR -3 585 18 294 280 53 0 chr5 175433352 175433427 -24196723 + L2 LINE L2 3155 3233 -39 558 304 0 6 chr5 175433466 175433627 -24196523 - MER117 DNA MER1_type -37 160 1 293 366 49 0 chr5 175434929 175435071 -24195079 + MIR SINE MIR 13 161 -101 8069 214 54 64 chr5 175435152 175435478 -24194672 + L1ME1 LINE L1 2700 3028 -3138 5519 93 18 7 chr5 175435478 175436209 -24193941 + L1PA14 LINE L1 5423 6161 0 8069 214 54 64 chr5 175436209 175436940 -24193210 + L1ME1 LINE L1 3028 3765 -2401 4102 124 50 8 chr5 175436940 175437554 -24192596 - LTR9B LTR ERV1 0 644 5 8069 214 54 64 chr5 175437554 175437670 -24192480 + L1ME1 LINE L1 3765 3881 -2285 369 43 0 0 chr5 175437670 175437717 -24192433 + (CA)n Simple_repeat Simple_repeat 2 48 0 8069 214 54 64 chr5 175437717 175437933 -24192217 + L1ME1 LINE L1 3881 4098 -2068 2380 85 0 3 chr5 175437933 175438238 -24191912 - AluY SINE Alu -7 304 1 8069 214 54 64 chr5 175438238 175439802 -24190348 + L1ME1 LINE L1 4098 5631 -535 1966 138 0 28 chr5 175439802 175440093 -24190057 + AluSx SINE Alu 1 283 -29 8069 214 54 64 chr5 175440093 175440618 -24189532 + L1ME1 LINE L1 5631 6160 -6 354 294 163 12 chr5 175440753 175440826 -24189324 + MER117 DNA MER1_type 10 71 -126 1539 190 118 84 chr5 175440826 175441311 -24188839 + MLT1D LTR MaLR 5 505 0 354 294 163 12 chr5 175441311 175441397 -24188753 + MER117 DNA MER1_type 71 193 -4 253 309 52 66 chr5 175441447 175441583 -24188567 - MIR SINE MIR -12 250 117 494 301 133 0 chr5 175442358 175442584 -24187566 - MIR SINE MIR 0 262 7 230 304 0 0 chr5 175442581 175442637 -24187513 + MIR SINE MIR 202 257 -5 * 391 290 48 11 chr5 175442725 175442911 -24187239 - L1ME3A LINE L1 -15 6155 5963 286 123 35 0 chr5 175443050 175443107 -24187043 + CT-rich Low_complexity Low_complexity 1 59 0 195 42 0 0 chr5 175443107 175443131 -24187019 + (TCCC)n Simple_repeat Simple_repeat 4 27 0 2010 126 3 0 chr5 175443131 175443417 -24186733 - AluSx SINE Alu -25 287 1 202 284 60 0 chr5 175444256 175444323 -24185827 + MIR3 SINE MIR 135 205 -3 731 271 74 39 chr5 175445427 175445711 -24184439 - MLT1K LTR MaLR -17 571 278 25 31 0 0 chr5 175446490 175446522 -24183628 + AT_rich Low_complexity Low_complexity 1 32 0 547 251 61 54 chr5 175446642 175446987 -24183163 + MLT1H LTR MaLR 138 605 -19 642 283 44 22 chr5 175447199 175447425 -24182725 - MIR SINE MIR -8 254 24 1984 149 6 167 chr5 175448306 175448721 -24181429 + MER47B DNA MER2_type 1 324 -1999 4943 89 2 0 chr5 175448721 175449351 -24180799 - L1PB1 LINE L1 -4 6147 5517 1984 149 6 167 chr5 175449351 175449433 -24180717 + MER47B DNA MER2_type 324 418 0 670 274 125 29 chr5 175449464 175449976 -24180174 - L2 LINE L2 -98 3215 2648 2082 134 0 0 chr5 175450214 175450512 -24179638 - AluSx SINE Alu -14 298 1 281 229 64 37 chr5 175450730 175450839 -24179311 + MLT1J LTR MaLR 400 511 0 196 300 0 0 chr5 175451369 175451419 -24178731 - L3 LINE CR1 -2 1575 1526 245 379 24 8 chr5 175451524 175451648 -24178502 - MIR SINE MIR -26 236 111 621 274 31 104 chr5 175451750 175452067 -24178083 + MLT1I LTR MaLR 98 391 -18 183 310 0 35 chr5 175452084 175452142 -24178008 - MIR SINE MIR -187 75 20 325 340 69 65 chr5 175452834 175453281 -24176869 + L2 LINE L2 2043 2491 -823 1154 206 28 0 chr5 175453997 175454249 -24175901 + L1MA9 LINE L1 6016 6274 -38 451 333 27 11 chr5 175454457 175454643 -24175507 + MER117 DNA MER1_type 4 192 -5 22 0 0 0 chr5 175454811 175454833 -24175317 + AT_rich Low_complexity Low_complexity 1 22 0 791 261 64 74 chr5 175455383 175455789 -24174361 + MLT1K LTR MaLR 181 582 -6 183 270 0 95 chr5 175456039 175456102 -24174048 - MIR SINE MIR -127 81 25 321 118 0 0 chr5 175456326 175456377 -24173773 + (ATG)n Simple_repeat Simple_repeat 3 53 0 2268 95 7 7 chr5 175456550 175456846 -24173304 + AluSg SINE Alu 1 296 -14 273 230 40 14 chr5 175457562 175457636 -24172514 + L2 LINE L2 3233 3308 -5 2105 127 3 10 chr5 175457851 175458159 -24171991 + AluSx SINE Alu 1 306 -6 1042 271 163 4 chr5 175458480 175458938 -24171212 - L2 LINE L2 -9 3304 2786 329 269 109 8 chr5 175458984 175459103 -24171047 - MIR SINE MIR -116 146 16 463 281 184 54 chr5 175459201 175459532 -24170618 + L2 LINE L2 2897 3270 -2 241 329 0 13 chr5 175459962 175460038 -24170112 - MIR SINE MIR -115 147 73 192 194 0 0 chr5 175460831 175460867 -24169283 + MIR SINE MIR 118 153 -109 1584 123 45 0 chr5 175460898 175461118 -24169032 + MER30 DNA MER1_type 1 230 0 228 163 0 0 chr5 175461151 175461194 -24168956 + (CAT)n Simple_repeat Simple_repeat 1 43 0 532 298 172 60 chr5 175461936 175462654 -24167496 + L2 LINE L2 1532 2407 -907 2605 174 74 6 chr5 175462654 175463125 -24167025 - MLT1D LTR MaLR 0 505 3 532 298 172 60 chr5 175463125 175463466 -24166684 + L2 LINE L2 2407 2709 -605 2545 229 53 65 chr5 175463538 175464341 -24165809 + MER21B LTR ERV1 1 794 -69 483 291 73 61 chr5 175464414 175464661 -24165489 + L2 LINE L2 2804 3053 -219 375 247 31 99 chr5 175464668 175464766 -24165384 + MLT1H LTR MaLR 12 96 -453 2211 123 0 0 chr5 175464766 175465067 -24165083 + AluSx SINE Alu 5 305 -7 375 247 31 99 chr5 175465067 175465130 -24165020 + MLT1H LTR MaLR 96 162 -387 247 260 41 0 chr5 175465362 175465435 -24164715 + LTR67 LTR ERVL 476 551 -6 2341 103 0 0 chr5 175465507 175465807 -24164343 + AluSx SINE Alu 1 300 -12 38 22 0 0 chr5 175465899 175465944 -24164206 + AT_rich Low_complexity Low_complexity 1 45 0 7798 22 0 0 chr5 175466109 175467339 -24162811 + L1PA3 LINE L1 4900 6129 -26 275 85 21 0 chr5 175467341 175467388 -24162762 + (TAA)n Simple_repeat Simple_repeat 3 50 0 180 274 98 0 chr5 175467520 175467571 -24162579 - MIR SINE MIR -61 147 92 649 285 48 10 chr5 175467638 175467845 -24162305 + MIR SINE MIR 48 262 0 330 87 0 0 chr5 175468069 175468115 -24162035 + (TGGA)n Simple_repeat Simple_repeat 1 46 0 213 226 0 0 chr5 175468243 175468296 -24161854 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 377 272 26 0 chr5 175469026 175469140 -24161010 - MIR SINE MIR -67 195 79 182 217 181 12 chr5 175469180 175469263 -24160887 - L2 LINE L2 -26 3246 3150 758 328 86 32 chr5 175469419 175469828 -24160322 - L2 LINE L2 -1 3271 2841 180 204 0 23 chr5 175469999 175470043 -24160107 - L2 LINE L2 -214 3058 3016 470 284 172 49 chr5 175470310 175470740 -24159410 - L2 LINE L2 0 3313 2831 2247 108 3 0 chr5 175470874 175471180 -24158970 + AluSx SINE Alu 1 307 -5 346 198 99 41 chr5 175471195 175471316 -24158834 - MIR SINE MIR -115 147 20 355 226 88 50 chr5 175471485 175471565 -24158585 + L1ME4a LINE L1 5955 6031 -90 2355 97 0 0 chr5 175471565 175471865 -24158285 - AluSp SINE Alu -13 300 1 355 226 88 50 chr5 175471865 175471943 -24158207 + L1ME4a LINE L1 6031 6119 -2 284 189 84 84 chr5 175471982 175472077 -24158073 + L2 LINE L2 3199 3293 -20 252 304 116 9 chr5 175473424 175473536 -24156614 - L2 LINE L2 -2 3270 3147 438 223 62 9 chr5 175473546 175473658 -24156492 + L2 LINE L2 3155 3272 0 311 343 60 0 chr5 175473716 175473850 -24156300 - L3b LINE CR1 -230 1353 1212 2166 127 0 0 chr5 175474150 175474449 -24155701 + AluSx SINE Alu 5 303 -9 3537 135 46 17 chr5 175475894 175476497 -24153653 - L1MC1 LINE L1 -39 6294 5676 264 271 29 14 chr5 175476623 175476693 -24153457 - MER5A DNA MER1_type -30 159 89 1364 235 50 45 chr5 175477222 175477626 -24152524 - MLT1I LTR MaLR -3 406 1 379 251 193 32 chr5 175477795 175477979 -24152171 + MIR SINE MIR 3 216 -46 577 214 148 11 chr5 175477979 175478140 -24152010 - MER5A DNA MER1_type 0 189 4 362 290 69 8 chr5 175478316 175478447 -24151703 + MIR SINE MIR 15 153 -109 1142 281 16 9 chr5 175478448 175478765 -24151385 + MER46C DNA MER2_type 1 319 -19 258 294 0 0 chr5 175478824 175478892 -24151258 + MIR SINE MIR 195 262 0 267 286 50 25 chr5 175479250 175479369 -24150781 + MIR SINE MIR 24 145 -63 3511 212 24 8 chr5 175480209 175480913 -24149237 + LTR39 LTR ERV1 69 783 0 274 258 81 32 chr5 175481681 175481805 -24148345 + MIR SINE MIR 38 167 -95 326 306 10 20 chr5 175483777 175483896 -24146254 - MIR SINE MIR -61 147 37 420 224 126 21 chr5 175484875 175485018 -24145132 + MIR SINE MIR 90 247 -15 385 226 75 58 chr5 175485510 175485701 -24144449 + MIR SINE MIR 11 213 -49 2337 164 5 22 chr5 175485742 175486157 -24143993 - L1PB1 LINE L1 0 6151 5744 21 36 0 0 chr5 175486309 175486337 -24143813 + AT_rich Low_complexity Low_complexity 1 28 0 351 336 95 7 chr5 175487351 175487488 -24142662 + MIR SINE MIR 53 201 -61 446 305 16 0 chr5 175487706 175487834 -24142316 + MIR SINE MIR 40 169 -93 307 303 125 48 chr5 175488660 175488868 -24141282 + MIR SINE MIR 24 247 -15 260 240 167 21 chr5 175488920 175489016 -24141134 - MIR SINE MIR -79 129 20 315 304 59 37 chr5 175489209 175489344 -24140806 - MIR SINE MIR -7 255 118 2315 163 47 18 chr5 175489351 175489799 -24140351 + MLT1C LTR MaLR 7 467 0 1058 315 64 51 chr5 175489818 175490567 -24139583 + L2 LINE L2 2423 3161 -152 3854 160 33 42 chr5 175490567 175490634 -24139516 - LTR62 LTR ERVK -2 717 651 207 0 0 0 chr5 175490634 175490657 -24139493 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2010 135 7 0 chr5 175490661 175490949 -24139201 - AluSx SINE Alu -22 290 1 3854 160 33 42 chr5 175490949 175491599 -24138551 - LTR62 LTR ERVK -71 648 1 1058 315 64 51 chr5 175491599 175491720 -24138430 + L2 LINE L2 3161 3309 -4 219 239 35 71 chr5 175492741 175492854 -24137296 - MIR3 SINE MIR -1 207 99 186 265 88 69 chr5 175493521 175493623 -24136527 - MIR SINE MIR -131 131 28 308 293 224 7 chr5 175494573 175494720 -24135430 - L2 LINE L2 0 3313 3135 239 331 61 49 chr5 175495426 175495589 -24134561 - MIR3 SINE MIR -4 204 40 1013 232 104 40 chr5 175495850 175496177 -24133973 - MLT1K LTR MaLR -23 565 218 351 214 34 34 chr5 175496636 175496725 -24133425 - MLT1K LTR MaLR -365 223 135 306 247 12 12 chr5 175496819 175496904 -24133246 - MLT1K LTR MaLR -491 97 13 282 276 69 0 chr5 175497136 175497223 -24132927 - L2 LINE L2 -11 3261 3169 183 222 154 34 chr5 175497252 175497369 -24132781 - MIR SINE MIR 0 262 132 2133 124 3 0 chr5 175498157 175498456 -24131694 - AluSg SINE Alu -10 300 1 353 284 18 0 chr5 175498625 175498734 -24131416 + MIR SINE MIR 100 210 -52 210 350 0 80 chr5 175498834 175498971 -24131179 + L2 LINE L2 3144 3269 -3 648 327 9 9 chr5 175499449 175499663 -24130487 - MIR SINE MIR -1 261 48 219 328 53 13 chr5 175499902 175500068 -24130082 - MIR SINE MIR -65 143 13 1272 176 16 61 chr5 175500637 175500950 -24129200 + L1 LINE L1 4110 4408 -1738 * 1993 185 41 53 chr5 175500943 175501334 -24128816 + L1 LINE L1 4735 5120 -1026 459 37 0 0 chr5 175501334 175501388 -24128762 + L1PA5 LINE L1 6099 6152 -2 1993 185 41 53 chr5 175501388 175501487 -24128663 + L1 LINE L1 5120 5219 -927 22 0 0 0 chr5 175501581 175501603 -24128547 + AT_rich Low_complexity Low_complexity 1 22 0 1964 274 85 30 chr5 175501857 175502410 -24127740 + L1ME LINE L1 1 611 -5459 3832 67 4 19 chr5 175502410 175502890 -24127260 + L1PA7 LINE L1 5681 6153 -1 1964 274 85 30 chr5 175502890 175503128 -24127022 + L1ME LINE L1 611 835 -5235 37 23 0 0 chr5 175503128 175503172 -24126978 + AT_rich Low_complexity Low_complexity 1 44 0 1746 275 64 61 chr5 175503239 175503466 -24126684 + L1ME LINE L1 903 1128 -5133 2406 79 3 19 chr5 175503466 175503781 -24126369 + AluY SINE Alu 2 311 0 1746 275 64 61 chr5 175503781 175504784 -24125366 + L1ME LINE L1 1128 2137 -4124 640 204 15 0 chr5 175504775 175504907 -24125243 + L1MC3 LINE L1 7652 7785 0 * 1071 221 54 66 chr5 175504910 175505336 -24124814 + L1ME LINE L1 2089 2509 -3571 1044 296 54 9 chr5 175505410 175505741 -24124409 - MLT1J LTR MaLR -157 354 9 2163 80 13 7 chr5 175505742 175506043 -24124107 + L1PA5 LINE L1 5728 6030 -124 649 262 55 40 chr5 175506154 175506559 -24123591 + L1MEc LINE L1 2150 2515 -3700 343 321 0 27 chr5 175506665 175506777 -24123373 - LTR16A LTR ERVL -265 185 77 2174 280 78 29 chr5 175506872 175507995 -24122155 + L1M4 LINE L1 3845 5022 -1124 1319 188 36 43 chr5 175507995 175508298 -24121852 + AluJo SINE Alu 1 301 -1 437 121 0 137 chr5 175508372 175508562 -24121588 - AluSq SINE Alu -27 286 123 11103 156 12 5 chr5 175508913 175511261 -24118889 + L1P4 LINE L1 3333 5698 -463 27 62 0 0 chr5 175511476 175511524 -24118626 + AT_rich Low_complexity Low_complexity 1 48 0 26 0 0 0 chr5 175511555 175511581 -24118569 + AT_rich Low_complexity Low_complexity 1 26 0 364 288 98 97 chr5 175512214 175512783 -24117367 + L1M2 LINE L1 529 1098 -5751 380 320 0 20 chr5 175514867 175515070 -24115080 + L1PA5 LINE L1 5956 6154 0 1125 68 54 0 chr5 175515094 175515241 -24114909 - L1PA5 LINE L1 -170 5984 5830 1928 188 25 17 chr5 175515464 175515826 -24114324 + MLT1A1 LTR MaLR 1 365 0 884 151 10 88 chr5 175515830 175515997 -24114153 + MLT1A1-int LTR MaLR 4 182 -1553 4346 109 46 10 chr5 175515997 175516610 -24113540 + MER41B LTR ERV1 1 635 0 884 151 10 88 chr5 175516610 175516638 -24113512 + MLT1A1-int LTR MaLR 182 185 -1550 6485 53 3 3 chr5 175516638 175517397 -24112753 + L1PA6 LINE L1 5395 6153 -1 4146 116 7 18 chr5 175517426 175517573 -24112577 + Tigger1 DNA MER2_type 1725 1872 -546 1647 95 22 30 chr5 175517573 175517805 -24112345 - MER30 DNA MER1_type 0 230 1 4146 116 7 18 chr5 175517805 175518276 -24111874 + Tigger1 DNA MER2_type 1872 2336 -82 5528 205 161 29 chr5 175518284 175519666 -24110484 + MLT1A1-int LTR MaLR 167 1730 -5 1690 178 108 9 chr5 175519670 175520002 -24110148 + MLT1A1 LTR MaLR 1 365 0 262 333 39 0 chr5 175520017 175520095 -24110055 + L2 LINE L2 3189 3269 -3 180 349 0 0 chr5 175520825 175520888 -24109262 - L2 LINE L2 0 3313 3251 * 285 186 0 34 chr5 175520855 175520914 -24109236 - MIR SINE MIR -24 238 182 255 315 40 67 chr5 175520930 175521011 -24109139 + MIR SINE MIR 39 116 -146 2001 107 0 4 chr5 175521011 175521282 -24108868 - AluSc SINE Alu -3 306 37 255 315 40 67 chr5 175521282 175521349 -24108801 + MIR SINE MIR 116 183 -79 479 320 16 7 chr5 175521532 175521681 -24108469 + MIR SINE MIR 36 185 -62 542 239 38 57 chr5 175521753 175521912 -24108238 - MIR SINE MIR -70 192 37 1844 179 3 3 chr5 175522013 175522315 -24107835 + AluSx SINE Alu 1 302 -10 483 304 178 39 chr5 175522490 175522878 -24107272 + MLT1J1 LTR MaLR 1 442 -4 189 292 22 45 chr5 175522895 175522984 -24107166 - L3 LINE CR1 -89 1488 1402 705 259 46 59 chr5 175522985 175523290 -24106860 - L2 LINE L2 0 3313 3013 224 291 46 66 chr5 175523328 175523479 -24106671 - L3 LINE CR1 -199 1378 1231 228 100 0 25 chr5 175524617 175524657 -24105493 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1752 124 9 100 chr5 175524657 175524987 -24105163 - AluSx SINE Alu 0 341 2 535 193 101 0 chr5 175524988 175525097 -24105053 + MER96 DNA MER1_type? 43 162 -13 626 224 125 73 chr5 175525285 175525557 -24104593 + MER102b DNA MER1_type 56 341 0 579 160 0 0 chr5 175526551 175526645 -24103505 - FRAM SINE Alu -83 93 1 695 276 190 26 chr5 175527013 175527592 -24102558 - L2 LINE L2 0 3313 2633 1042 210 63 105 chr5 175527594 175527956 -24102194 - MLT1A2 LTR MaLR -4 370 24 1499 153 4 4 chr5 175528159 175528388 -24101762 + AluSx SINE Alu 1 229 -83 713 171 23 11 chr5 175528440 175528615 -24101535 + GA-rich Low_complexity Low_complexity 2 178 0 418 204 86 0 chr5 175529063 175529156 -24100994 - MLT1H1 LTR MaLR 0 555 455 196 152 0 0 chr5 175529196 175529229 -24100921 - L2 LINE L2 -8 3305 3273 494 251 137 10 chr5 175530159 175530361 -24099789 - MIR SINE MIR -34 228 2 357 285 42 0 chr5 175530476 175530606 -24099544 + MIR SINE MIR 59 194 -62 1777 157 79 77 chr5 175531140 175531435 -24098715 - MLT1C LTR MaLR 0 467 169 1968 158 6 3 chr5 175531435 175531746 -24098404 - AluJb SINE Alu 0 312 1 1777 157 79 77 chr5 175531746 175531916 -24098234 - MLT1C LTR MaLR -298 169 1 235 290 0 16 chr5 175531952 175532014 -24098136 + MIR SINE MIR 34 94 -114 413 248 73 0 chr5 175532203 175532312 -24097838 - MER103 DNA DNA -46 120 4 275 259 0 0 chr5 175532437 175532495 -24097655 + LTR16C LTR ERVL 434 491 0 274 234 43 11 chr5 175532557 175532651 -24097499 - HAL1b LINE L1 -9 1339 1243 2181 137 0 3 chr5 175532693 175533006 -24097144 - AluSx SINE Alu 0 312 1 211 292 142 47 chr5 175533215 175533416 -24096734 - MIR SINE MIR -4 258 27 939 316 42 41 chr5 175533483 175534025 -24096125 + LTR67 LTR ERVL 12 554 -3 324 186 174 0 chr5 175534367 175534453 -24095697 - Charlie1b DNA MER1_type 0 523 423 * 1302 195 81 0 chr5 175534451 175534712 -24095438 - Charlie1b DNA MER1_type -241 282 1 191 302 0 0 chr5 175534892 175534935 -24095215 + MIR SINE MIR 61 103 -105 472 275 75 109 chr5 175535103 175535580 -24094570 - MLT1K LTR MaLR 0 588 128 282 273 20 10 chr5 175535824 175535923 -24094227 + L1MC4 LINE L1 6612 6711 -1331 252 365 0 10 chr5 175537190 175537294 -24092856 + L3 LINE CR1 1250 1352 -225 197 226 32 0 chr5 175537791 175537853 -24092297 - L2 LINE L2 -340 2973 2910 2385 95 0 3 chr5 175538420 175538726 -24091424 + AluY SINE Alu 1 305 -6 1114 234 90 80 chr5 175538922 175539423 -24090727 + MLT1J LTR MaLR 1 506 -5 643 301 88 43 chr5 175539489 175539911 -24090239 - L2 LINE L2 -2 3311 2871 253 262 99 64 chr5 175540501 175540673 -24089477 - MER5A DNA MER1_type 0 178 1 379 246 106 22 chr5 175540769 175540948 -24089202 + L2 LINE L2 1049 1242 -2072 2451 268 99 45 chr5 175540965 175542498 -24087652 + L2 LINE L2 1534 3162 -151 2465 177 63 4 chr5 175542498 175542973 -24087177 + MLT1D LTR MaLR 3 505 0 2451 268 99 45 chr5 175542973 175543133 -24087017 + L2 LINE L2 3162 3312 -1 2280 107 17 0 chr5 175543211 175543509 -24086641 + AluSg SINE Alu 1 303 -7 487 264 186 33 chr5 175544085 175544419 -24085731 - MLT1K LTR MaLR -12 576 192 630 292 170 13 chr5 175544616 175545010 -24085140 - L3 LINE CR1 -85 1492 1037 231 157 0 0 chr5 175545391 175545442 -24084708 + CT-rich Low_complexity Low_complexity 2 52 0 533 219 0 0 chr5 175545525 175545621 -24084529 + AluJ/FLAM SINE Alu 2 97 -215 481 353 50 40 chr5 175545641 175546018 -24084132 - L3 LINE CR1 -595 982 602 186 286 103 8 chr5 175546097 175546223 -24083927 - L3 LINE CR1 -1113 464 327 237 288 55 0 chr5 175546556 175546629 -24083521 - MER2 DNA MER2_type -2 343 267 2155 150 3 0 chr5 175546710 175547043 -24083107 + MER7A DNA MER2_type 14 345 -1 1101 143 0 0 chr5 175547049 175547210 -24082940 - MER2 DNA MER2_type -182 163 3 359 286 35 37 chr5 175547211 175547501 -24082649 + MLT1I LTR MaLR 69 390 -19 503 230 14 36 chr5 175548057 175548196 -24081954 - MER103 DNA DNA -28 138 3 425 225 8 50 chr5 175548753 175548873 -24081277 - MIR3 SINE MIR -7 201 87 542 352 78 16 chr5 175549150 175549471 -24080679 + L2 LINE L2 2633 2973 -341 231 337 0 12 chr5 175549472 175549555 -24080595 + (CATA)n Simple_repeat Simple_repeat 3 84 0 340 346 31 0 chr5 175549743 175549870 -24080280 + L2 LINE L2 3141 3271 -1 751 143 17 17 chr5 175552072 175552191 -24077959 + FLAM_C SINE Alu 2 120 -23 354 257 106 34 chr5 175552204 175552383 -24077767 - L2 LINE L2 -15 3298 3107 576 219 104 38 chr5 175552546 175552729 -24077421 + MIR SINE MIR 52 246 -16 337 259 29 9 chr5 175552938 175553059 -24077091 + MIR SINE MIR 30 151 -62 469 213 128 27 chr5 175553290 175553453 -24076697 - MER5A DNA MER1_type -2 187 4 699 253 0 12 chr5 175553597 175553763 -24076387 - MIR SINE MIR -19 243 80 666 288 95 0 chr5 175554021 175554243 -24075907 + MIR SINE MIR 4 246 -16 506 202 24 8 chr5 175555090 175555214 -24074936 - MER113 DNA MER1_type? -111 410 285 536 286 0 0 chr5 175555235 175555389 -24074761 + MIR SINE MIR 40 193 -69 793 242 96 0 chr5 175555441 175555681 -24074469 - MER113 DNA MER1_type? -254 267 5 473 227 18 0 chr5 175555684 175555794 -24074356 - MIR3 SINE MIR -48 160 49 11800 33 7 0 chr5 175555836 175557980 -24072170 + L1PA4 LINE L1 3988 6142 -13 21 0 0 0 chr5 175558084 175558105 -24072045 + AT_rich Low_complexity Low_complexity 1 21 0 829 282 62 16 chr5 175558843 175559148 -24071002 - MER102b DNA MER1_type -3 338 20 226 235 20 0 chr5 175559466 175559517 -24070633 + L2 LINE L2 3219 3270 -2 418 306 25 6 chr5 175559727 175559884 -24070266 + MIR SINE MIR 32 191 -71 733 262 89 0 chr5 175560532 175560757 -24069393 + MIR SINE MIR 13 257 -5 283 272 0 120 chr5 175561086 175561211 -24068939 - MIR SINE MIR -56 152 43 24 67 0 0 chr5 175561226 175561271 -24068879 + AT_rich Low_complexity Low_complexity 1 45 0 669 260 63 22 chr5 175561668 175561891 -24068259 - MIR SINE MIR -16 246 15 22 0 0 0 chr5 175562929 175562951 -24067199 + AT_rich Low_complexity Low_complexity 1 22 0 193 220 40 0 chr5 175563952 175564002 -24066148 + L2 LINE L2 3207 3258 -14 860 258 114 3 chr5 175564182 175564559 -24065591 - LTR16C LTR ERVL -13 478 45 232 247 26 13 chr5 175564596 175564673 -24065477 + L2 LINE L2 3236 3313 0 22 0 0 0 chr5 175564700 175564722 -24065428 + AT_rich Low_complexity Low_complexity 1 22 0 415 260 47 24 chr5 175565935 175566062 -24064088 - MIR SINE MIR -60 148 19 22 0 0 0 chr5 175566140 175566162 -24063988 + AT_rich Low_complexity Low_complexity 1 22 0 195 204 61 0 chr5 175566162 175566211 -24063939 + L2 LINE L2 3216 3267 -5 652 222 8 8 chr5 175566277 175566403 -24063747 - FLAM_A SINE Alu -7 126 1 2323 98 16 0 chr5 175567180 175567487 -24062663 - AluSx SINE Alu 0 312 1 552 226 66 6 chr5 175567507 175567683 -24062467 - MIR SINE MIR -41 221 34 675 289 83 0 chr5 175567728 175567932 -24062218 - MIR SINE MIR -26 236 16 1808 130 57 20 chr5 175568055 175568354 -24061796 - AluSx SINE Alu -2 310 1 595 203 36 7 chr5 175568928 175569066 -24061084 + MIR3 SINE MIR 66 207 -1 1114 166 47 24 chr5 175570223 175570434 -24059716 + AluJb SINE Alu 85 300 -12 2020 121 45 0 chr5 175570440 175570729 -24059421 + AluSx SINE Alu 3 304 -8 182 321 0 0 chr5 175570729 175570785 -24059365 - L2 LINE L2 -83 3189 3134 207 174 0 65 chr5 175571590 175571636 -24058514 + polypyrimidine Low_complexity Low_complexity 3 45 0 479 269 22 0 chr5 175572156 175572290 -24057860 + MIR SINE MIR 60 196 -66 181 263 0 0 chr5 175573063 175573101 -24057049 + MIR SINE MIR 87 124 -84 190 385 0 18 chr5 175573322 175573431 -24056719 + L3 LINE CR1 1028 1134 -443 352 358 110 4 chr5 175573483 175573729 -24056421 + L3 LINE CR1 1264 1535 -42 918 258 18 4 chr5 175573790 175574019 -24056131 + MIR SINE MIR 29 260 -2 369 292 34 64 chr5 175574066 175574333 -24055817 - L2 LINE L2 -40 3273 3015 186 103 0 0 chr5 175574570 175574599 -24055551 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr5 175575329 175575350 -24054800 + AT_rich Low_complexity Low_complexity 1 21 0 1017 217 135 58 chr5 175575446 175575875 -24054275 - MLT1C LTR MaLR 0 467 6 26 0 0 0 chr5 175576276 175576302 -24053848 + AT_rich Low_complexity Low_complexity 1 26 0 431 226 149 83 chr5 175576386 175576567 -24053583 - LTR33A LTR ERVL -302 221 29 446 272 22 15 chr5 175576607 175576743 -24053407 - MIR SINE MIR -106 156 20 4269 55 0 0 chr5 175576901 175577412 -24052738 - L1PA8 LINE L1 -23 6149 5639 493 252 121 22 chr5 175577426 175577713 -24052437 + LTR16A LTR ERVL 3 372 -78 489 285 37 41 chr5 175579658 175579900 -24050250 + MER102b DNA MER1_type 101 341 0 754 251 118 58 chr5 175579966 175580027 -24050123 - MLT1L LTR MaLR -7 608 552 1990 121 3 0 chr5 175580027 175580331 -24049819 + AluSx SINE Alu 1 305 0 754 251 118 58 chr5 175580331 175580769 -24049381 - MLT1L LTR MaLR -63 552 34 705 336 19 19 chr5 175581729 175581988 -24048162 - MIR SINE MIR -1 261 3 384 306 71 29 chr5 175582712 175582884 -24047266 - MIR SINE MIR -62 146 15 206 318 63 0 chr5 175582989 175583052 -24047098 - L2 LINE L2 -49 3264 3198 2060 120 0 0 chr5 175583834 175584134 -24046016 + AluSx SINE Alu 1 300 -12 290 287 165 18 chr5 175584455 175584619 -24045531 - MIR SINE MIR -36 226 39 * 813 295 81 34 chr5 175584603 175584898 -24045252 - L3 LINE CR1 -12 1565 1257 234 247 49 37 chr5 175584966 175585047 -24045103 + L2 LINE L2 3190 3271 -1 1408 6 0 0 chr5 175585170 175585328 -24044822 + AluYb8 SINE Alu 158 315 -3 372 22 0 0 chr5 175585420 175585465 -24044685 + (TC)n Simple_repeat Simple_repeat 2 46 0 180 260 20 0 chr5 175586296 175586346 -24043804 - MIR3 SINE MIR -5 203 153 310 210 210 9 chr5 175586530 175586646 -24043504 - MIR SINE MIR -68 140 16 204 40 0 0 chr5 175586979 175587004 -24043146 + (GA)n Simple_repeat Simple_repeat 2 26 0 198 286 18 0 chr5 175587778 175587834 -24042316 + MIR3 SINE MIR 150 206 -2 2119 179 8 26 chr5 175588378 175588757 -24041393 + MSTD LTR MaLR 25 396 0 207 219 0 0 chr5 175589307 175589348 -24040802 + (TAA)n Simple_repeat Simple_repeat 2 42 0 942 301 120 20 chr5 175589381 175589923 -24040227 + MLT1L LTR MaLR 20 615 0 750 325 21 8 chr5 175589923 175590157 -24039993 - MIR SINE MIR -22 240 4 182 359 38 38 chr5 175590852 175590983 -24039167 + MIR SINE MIR 8 138 -124 222 118 0 0 chr5 175590983 175591017 -24039133 + (TA)n Simple_repeat Simple_repeat 2 35 0 195 69 0 0 chr5 175591102 175591131 -24039019 + (ATG)n Simple_repeat Simple_repeat 3 31 0 299 247 65 11 chr5 175591784 175591877 -24038273 + MLT1L LTR MaLR 509 606 -9 421 257 35 26 chr5 175592138 175592251 -24037899 - MIR3 SINE MIR -50 158 45 622 244 108 25 chr5 175592619 175592898 -24037252 - LTR33A LTR ERVL 0 523 222 282 258 65 11 chr5 175592988 175593081 -24037069 + MLT1L LTR MaLR 509 606 -9 298 337 63 11 chr5 175593182 175593357 -24036793 - LTR33A LTR ERVL -337 186 3 482 298 186 18 chr5 175593513 175593788 -24036362 + LTR67 LTR ERVL 2 322 -235 461 216 9 9 chr5 175593857 175593968 -24036182 + LTR67 LTR ERVL 434 544 -13 1444 282 99 41 chr5 175594492 175595049 -24035101 - MLT1G1 LTR MaLR -6 589 1 2075 108 0 0 chr5 175596075 175596362 -24033788 + AluSg SINE Alu 1 287 -23 5689 82 3 1 chr5 175596452 175597191 -24032959 - L1PA11 LINE L1 -18 6156 5417 183 356 0 0 chr5 175597749 175597808 -24032342 - L2 LINE L2 -1 3271 3213 463 261 99 57 chr5 175598290 175598416 -24031734 - L2 LINE L2 -17 3296 3156 685 294 8 78 chr5 175598416 175598773 -24031377 - MER46C DNA MER2_type -3 335 4 463 261 99 57 chr5 175598773 175598857 -24031293 - L2 LINE L2 -157 3156 3077 200 350 68 10 chr5 175598856 175598959 -24031191 - MIR SINE MIR -35 227 119 * 461 253 58 0 chr5 175599035 175599189 -24030961 + MER113 DNA MER1_type? 33 195 -326 378 297 84 31 chr5 175599472 175599678 -24030472 - MIR SINE MIR -36 226 6 765 61 30 0 chr5 175599701 175599800 -24030350 + L1PA11 LINE L1 6073 6174 0 592 101 0 0 chr5 175599954 175600033 -24030117 + AluS SINE Alu 2 80 -233 457 289 23 16 chr5 175600037 175600165 -24029985 + L2 LINE L2 3185 3313 0 461 141 0 0 chr5 175600202 175600273 -24029877 + L2 LINE L2 3202 3272 0 256 344 21 0 chr5 175601162 175601258 -24028892 - MIR SINE MIR -78 130 33 2232 94 0 0 chr5 175601324 175601622 -24028528 + AluSg SINE Alu 1 298 -12 375 266 0 21 chr5 175601845 175601939 -24028211 + MIR3 SINE MIR 110 201 -7 180 152 0 0 chr5 175602135 175602168 -24027982 + C-rich Low_complexity Low_complexity 4 36 0 1578 160 18 21 chr5 175602982 175603263 -24026887 + AluJb SINE Alu 1 280 -32 993 122 11 11 chr5 175603264 175603444 -24026706 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 304 211 0 0 chr5 175603489 175603546 -24026604 + MER117 DNA MER1_type 72 128 -69 483 281 37 7 chr5 175603664 175603799 -24026351 - MER91C DNA MER1_type 0 140 2 316 353 16 8 chr5 175603903 175604025 -24026125 + MIR3 SINE MIR 58 180 -28 637 321 70 25 chr5 175604140 175604670 -24025480 - L1 LINE L1 -1276 4870 4317 397 276 84 39 chr5 175604955 175605158 -24024992 + MARNA DNA Mariner 307 518 -68 209 330 82 0 chr5 175607153 175607250 -24022900 - L2 LINE L2 -1 3312 3208 288 310 43 17 chr5 175607357 175607473 -24022677 - L2 LINE L2 -237 3035 2917 430 260 7 78 chr5 175607520 175607674 -24022476 - MIR SINE MIR -60 202 60 1788 151 0 4 chr5 175607745 175608024 -24022126 + AluJo SINE Alu 1 278 -34 1560 32 0 5 chr5 175608024 175608210 -24021940 + L1PA4 LINE L1 5971 6155 0 4332 156 62 12 chr5 175609839 175610668 -24019482 + L1MB2 LINE L1 5302 6171 0 224 313 126 55 chr5 175610733 175610915 -24019235 + L2 LINE L2 3077 3271 -1 181 213 128 0 chr5 175610933 175610980 -24019170 + MIR SINE MIR 118 170 -92 221 310 28 0 chr5 175611518 175611589 -24018561 + MIR SINE MIR 176 248 -14 394 210 150 0 chr5 175611643 175611743 -24018407 - MIR SINE MIR -78 184 70 242 299 122 0 chr5 175612147 175612294 -24017856 + L1ME4a LINE L1 5946 6110 -11 507 225 174 37 chr5 175612338 175612506 -24017644 + MIR3 SINE MIR 6 194 -14 243 309 41 21 chr5 175612762 175612859 -24017291 - MIR SINE MIR 0 262 164 183 80 0 0 chr5 175613665 175613690 -24016460 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 354 321 82 8 chr5 175613692 175613826 -24016324 - L2 LINE L2 -12 3260 3117 2001 125 7 0 chr5 175614029 175614317 -24015833 - AluSx SINE Alu -17 295 6 532 318 62 11 chr5 175614605 175614784 -24015366 + MER5A DNA MER1_type 2 189 0 412 186 69 20 chr5 175615517 175615619 -24014531 + MIR SINE MIR 156 262 0 864 186 126 6 chr5 175615816 175615999 -24014151 - MIR SINE MIR -1 261 57 270 0 0 0 chr5 175616124 175616154 -24013996 + (CA)n Simple_repeat Simple_repeat 1 30 0 559 271 81 38 chr5 175616376 175616486 -24013664 + MIR SINE MIR 39 143 -119 1656 167 167 24 chr5 175616486 175616863 -24013287 + MSTB1 LTR MaLR 2 432 0 559 271 81 38 chr5 175616863 175616962 -24013188 + MIR SINE MIR 143 257 -5 230 179 18 0 chr5 175618216 175618272 -24011878 + (CATA)n Simple_repeat Simple_repeat 2 58 0 476 264 41 91 chr5 175618315 175618535 -24011615 - MIR SINE MIR -14 248 40 351 216 22 127 chr5 175618621 175618698 -24011452 + MIR3 SINE MIR 89 148 -60 1194 213 5 0 chr5 175618698 175618914 -24011236 - MER58A DNA MER1_type -4 220 4 351 216 22 127 chr5 175618914 175618970 -24011180 + MIR3 SINE MIR 148 208 0 239 239 0 0 chr5 175619044 175619111 -24011039 + T-rich Low_complexity Low_complexity 1 67 0 912 243 0 12 chr5 175620070 175620269 -24009881 + MIR SINE MIR 49 241 -21 882 229 67 14 chr5 175620287 175620510 -24009640 - MIR SINE MIR -26 236 2 180 314 0 57 chr5 175620510 175620576 -24009574 - MIR SINE MIR -112 96 35 785 267 82 0 chr5 175620797 175621003 -24009147 + MIR SINE MIR 20 242 -20 188 284 110 55 chr5 175622320 175622429 -24007721 - L3 LINE CR1 -29 1548 1434 214 230 120 70 chr5 175622469 175622569 -24007581 + MIR3 SINE MIR 7 111 -97 262 281 163 25 chr5 175623079 175623239 -24006911 + MIR SINE MIR 64 245 -17 389 344 70 37 chr5 175623348 175623589 -24006561 + MIR SINE MIR 3 251 -11 677 293 54 30 chr5 175623791 175624125 -24006025 + L2 LINE L2 2972 3313 0 24 53 0 0 chr5 175624454 175624492 -24005658 + GC_rich Low_complexity Low_complexity 1 38 0 29 84 0 0 chr5 175624745 175624816 -24005334 + GC_rich Low_complexity Low_complexity 1 71 0 595 312 98 0 chr5 175677571 175677744 -23952406 + MIR SINE MIR 69 258 -4 433 336 0 14 chr5 175678028 175678171 -23951979 + MIR3 SINE MIR 20 160 -48 367 280 27 32 chr5 175678175 175678361 -23951789 - MER5A DNA MER1_type -4 185 1 248 309 65 32 chr5 175680205 175680328 -23949822 - L2 LINE L2 0 3272 3146 616 310 20 0 chr5 175680338 175680535 -23949615 - MIR SINE MIR -15 247 47 521 301 179 44 chr5 175680906 175681734 -23948416 - L2 LINE L2 0 3313 2374 327 299 25 57 chr5 175681862 175682019 -23948131 + MER5A DNA MER1_type 11 167 -16 457 196 70 35 chr5 175682053 175682167 -23947983 - MIR SINE MIR -27 181 63 205 167 0 0 chr5 175682433 175682469 -23947681 + (TG)n Simple_repeat Simple_repeat 2 37 0 182 170 0 21 chr5 175682616 175682663 -23947487 + GA-rich Low_complexity Low_complexity 1 46 0 686 251 4 72 chr5 175683039 175683274 -23946876 - MIR SINE MIR -2 260 42 698 217 19 0 chr5 175683439 175683596 -23946554 - MER69 DNA AcHobo -319 2207 2048 1310 276 70 27 chr5 175683605 175684116 -23946034 - MER69 DNA AcHobo -1958 568 36 182 281 31 0 chr5 175684700 175684764 -23945386 - MIR SINE MIR -73 189 124 2211 104 0 0 chr5 175684767 175685054 -23945096 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr5 175685055 175685075 -23945075 + (TTAAA)n Simple_repeat Simple_repeat 5 24 0 22 0 0 0 chr5 175685517 175685539 -23944611 + AT_rich Low_complexity Low_complexity 1 22 0 300 53 0 0 chr5 175685539 175685577 -23944573 + (CA)n Simple_repeat Simple_repeat 2 39 0 440 228 24 65 chr5 175685759 175685882 -23944268 - MER94 DNA DNA 0 134 17 1456 182 111 14 chr5 175687223 175687592 -23942558 - Charlie4a DNA MER1_type -19 489 85 21 0 0 0 chr5 175687613 175687634 -23942516 + AT_rich Low_complexity Low_complexity 1 21 0 715 244 90 32 chr5 175688165 175688445 -23941705 - L1MC4a LINE L1 -360 5818 5596 772 113 4 2 chr5 175688510 175688767 -23941383 + AluSx SINE Alu 1 305 -4 232 53 105 0 chr5 175689142 175689218 -23940932 + (TA)n Simple_repeat Simple_repeat 2 85 0 1319 143 0 19 chr5 175689271 175689481 -23940669 + AluJ SINE Alu 2 207 -105 524 188 0 0 chr5 175689581 175689677 -23940473 + AluJ SINE Alu 211 306 -6 1837 185 34 8 chr5 175689971 175690327 -23939823 - MLT1A1 LTR MaLR 0 365 1 1961 157 0 13 chr5 175690508 175690820 -23939330 - AluJo SINE Alu -4 308 1 729 256 231 34 chr5 175690971 175691564 -23938586 - L1MC4a LINE L1 -1729 6079 5370 1737 94 0 51 chr5 175692942 175693198 -23936952 + AluSx SINE Alu 55 297 -15 289 300 25 0 chr5 175693239 175693390 -23936760 + MIR SINE MIR 106 260 -2 2204 118 0 0 chr5 175693916 175694212 -23935938 - AluSx SINE Alu -16 296 1 510 303 46 13 chr5 175694253 175694444 -23935706 + MIR SINE MIR 11 213 -49 1146 149 58 5 chr5 175694444 175694652 -23935498 + MER20 DNA MER1_type 1 219 0 510 303 46 13 chr5 175694652 175694698 -23935452 + MIR SINE MIR 213 256 -6 815 226 16 11 chr5 175695302 175695488 -23934662 + MER5A DNA MER1_type 1 187 -2 293 247 62 0 chr5 175695652 175695733 -23934417 - MIR SINE MIR -94 168 83 2053 109 6 32 chr5 175695800 175696113 -23934037 - AluSg SINE Alu -5 305 1 324 276 153 12 chr5 175696367 175696537 -23933613 + MIR SINE MIR 63 256 -6 284 228 80 15 chr5 175697361 175697491 -23932659 - MIR3 SINE MIR -8 200 63 243 0 0 0 chr5 175697618 175697645 -23932505 + (GA)n Simple_repeat Simple_repeat 1 27 0 * 405 0 0 0 chr5 175697644 175697689 -23932461 + (TG)n Simple_repeat Simple_repeat 1 45 0 480 280 8 8 chr5 175697924 175698056 -23932094 + MIR SINE MIR 56 187 -75 281 267 120 31 chr5 175698085 175698276 -23931874 + L2 LINE L2 2856 3063 -209 2821 142 10 42 chr5 175698534 175699035 -23931115 + MER31A LTR ERV1 1 485 0 285 183 0 0 chr5 175699043 175699103 -23931047 + (CA)n Simple_repeat Simple_repeat 2 61 0 1014 201 50 0 chr5 175699483 175699682 -23930468 - MER3 DNA MER1_type 0 209 1 667 178 22 0 chr5 175699777 175699915 -23930235 + L1MB7 LINE L1 5520 5666 -518 2593 150 17 35 chr5 175700026 175700385 -23929765 + L1MB7 LINE L1 5674 6023 -161 2554 72 0 0 chr5 175700385 175700691 -23929459 - AluY SINE Alu -5 306 1 2593 150 17 35 chr5 175700691 175700851 -23929299 + L1MB7 LINE L1 6023 6184 0 374 264 94 26 chr5 175700852 175701008 -23929142 + L1MC4a LINE L1 5706 5829 -341 712 117 17 8 chr5 175701011 175701131 -23929019 + FLAM_C SINE Alu 13 133 -10 235 194 16 0 chr5 175701227 175701289 -23928861 + L1ME4a LINE L1 5946 6008 -113 2125 101 0 0 chr5 175701435 175701711 -23928439 + AluSx SINE Alu 37 312 0 183 100 0 0 chr5 175702352 175702382 -23927768 + (TC)n Simple_repeat Simple_repeat 2 31 0 381 22 0 0 chr5 175702382 175702428 -23927722 + (CA)n Simple_repeat Simple_repeat 1 46 0 508 233 17 91 chr5 175703100 175703276 -23926874 - MIR SINE MIR -23 239 77 * 843 283 24 90 chr5 175703273 175703567 -23926583 - L2 LINE L2 -14 3299 2987 1678 145 97 17 chr5 175703567 175703856 -23926294 + AluSx SINE Alu 1 312 0 843 283 24 90 chr5 175703856 175704206 -23925944 - L2 LINE L2 -326 2987 2715 2669 52 0 0 chr5 175704206 175704516 -23925634 - AluY SINE Alu -1 310 1 843 283 24 90 chr5 175704516 175704638 -23925512 - L2 LINE L2 -598 2715 2587 640 193 31 6 chr5 175704805 175704966 -23925184 - L1ME3A LINE L1 -5 6165 6001 584 288 28 41 chr5 175705394 175705528 -23924622 - MIR SINE MIR -6 256 126 2015 116 7 7 chr5 175705528 175705836 -23924314 + AluSq SINE Alu 1 308 0 584 288 28 41 chr5 175705836 175705952 -23924198 - MIR SINE MIR -136 126 10 260 159 152 65 chr5 175706962 175707100 -23923050 - L1ME4a LINE L1 -11 6110 5961 268 265 26 17 chr5 175707208 175707325 -23922825 - L1ME4a LINE L1 -347 5774 5657 885 246 19 9 chr5 175707329 175707544 -23922606 - MIR SINE MIR -32 230 14 476 283 22 17 chr5 175707544 175707724 -23922426 - L1ME4a LINE L1 -468 5653 5473 1829 166 18 15 chr5 175710616 175710954 -23919196 - MER44D DNA MER2_type 0 609 1 342 298 51 11 chr5 175711035 175711213 -23918937 + MIR SINE MIR 78 262 0 2107 139 10 0 chr5 175711547 175711850 -23918300 + AluSx SINE Alu 1 306 -6 404 276 110 0 chr5 175712030 175712175 -23917975 + MIR SINE MIR 31 191 -71 1845 184 9 14 chr5 175712636 175712983 -23917167 - MLT1A1 LTR MaLR 0 365 21 244 289 53 0 chr5 175714214 175714290 -23915860 - MIR3 SINE MIR -20 188 109 207 146 0 0 chr5 175714367 175714408 -23915742 + (TC)n Simple_repeat Simple_repeat 2 42 0 950 159 44 33 chr5 175714429 175714611 -23915539 + AluJo SINE Alu 1 184 -128 419 327 125 13 chr5 175714930 175715306 -23914844 - L1MC4a LINE L1 -1895 5913 5496 2157 127 3 0 chr5 175715366 175715665 -23914485 - AluSx SINE Alu -12 300 1 1861 164 3 13 chr5 175715715 175716019 -23914131 + AluJb SINE Alu 1 301 -11 1982 124 28 3 chr5 175716160 175716451 -23913699 + AluSq SINE Alu 14 311 -2 360 256 37 30 chr5 175717140 175717304 -23912846 - L1MC4a LINE L1 -1524 4622 4458 216 274 0 0 chr5 175717808 175717859 -23912291 - L2 LINE L2 -11 3261 3211 229 292 125 31 chr5 175717879 175717975 -23912175 - L2 LINE L2 -10 3303 3199 36 40 0 0 chr5 175718265 175718315 -23911835 + AT_rich Low_complexity Low_complexity 1 50 0 272 321 18 9 chr5 175718410 175718522 -23911628 + MIR SINE MIR 32 144 -118 604 212 79 24 chr5 175719053 175719218 -23910932 + FAM SINE Alu 2 175 0 221 238 143 0 chr5 175719238 175719301 -23910849 - MER5A DNA MER1_type -107 82 11 342 361 12 30 chr5 175719347 175719513 -23910637 - L2 LINE L2 -2 3270 3108 320 194 201 22 chr5 175719664 175719798 -23910352 + MIR SINE MIR 49 206 -56 223 344 0 0 chr5 175720262 175720352 -23909798 - MIR3 SINE MIR -1 207 118 1674 147 46 4 chr5 175720445 175720704 -23909446 + AluSg SINE Alu 24 293 -17 201 187 13 67 chr5 175720898 175720973 -23909177 + (CATTT)n Simple_repeat Simple_repeat 2 72 0 313 193 165 37 chr5 175721024 175721133 -23909017 + MIR SINE MIR 124 246 -16 1162 131 6 11 chr5 175721163 175721346 -23908804 - AluJo SINE Alu -11 301 120 720 186 31 0 chr5 175721380 175721558 -23908592 - FLAM_C SINE Alu 0 182 1 393 243 66 33 chr5 175721586 175721738 -23908412 - L1ME4a LINE L1 -2 6119 5963 195 186 0 0 chr5 175721782 175721825 -23908325 + (TA)n Simple_repeat Simple_repeat 1 43 0 319 282 73 32 chr5 175721849 175721973 -23908177 + MIR SINE MIR 12 140 -122 225 315 11 0 chr5 175722090 175722182 -23907968 + MIR SINE MIR 170 262 0 185 189 0 57 chr5 175722646 175722699 -23907451 - L2 LINE L2 -6 3307 3258 1017 250 76 14 chr5 175722703 175723047 -23907103 - MER113 DNA MER1_type? -96 425 61 368 299 133 21 chr5 175723369 175723603 -23906547 - MIR SINE MIR -1 261 2 220 197 0 76 chr5 175723661 175723727 -23906423 + MIR SINE MIR 66 126 -82 219 36 0 0 chr5 175724322 175724350 -23905800 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 445 125 0 0 chr5 175724358 175724422 -23905728 - AluSq SINE Alu -54 259 196 1040 109 7 0 chr5 175724429 175724567 -23905583 - AluSq SINE Alu -173 139 1 604 218 75 11 chr5 175724808 175724982 -23905168 - MIR SINE MIR -44 218 34 465 319 103 23 chr5 175725042 175725529 -23904621 + L1MC4a LINE L1 5403 5814 -307 445 279 99 17 chr5 175725942 175726114 -23904036 - MIR SINE MIR -3 259 74 259 267 53 0 chr5 175726552 175726627 -23903523 + L2 LINE L2 3194 3272 0 263 250 39 62 chr5 175726699 175726827 -23903323 + MIR SINE MIR 137 261 -1 607 136 0 0 chr5 175727008 175727096 -23903054 - AluSq/x SINE Alu -204 109 22 772 167 23 8 chr5 175727240 175727372 -23902778 - AluJo SINE Alu -177 135 2 256 317 73 0 chr5 175728012 175728094 -23902056 + MIR3 SINE MIR 110 197 -11 346 231 127 64 chr5 175728266 175728439 -23901711 + L1ME4a LINE L1 5938 6121 0 368 313 0 0 chr5 175728456 175728560 -23901590 + MIR SINE MIR 45 147 -65 502 306 67 49 chr5 175728810 175729290 -23900860 - L1MC4a LINE L1 -396 5766 5421 1790 154 10 10 chr5 175729290 175729595 -23900555 - AluJo SINE Alu -7 305 1 502 306 67 49 chr5 175729595 175729803 -23900347 - L1MC4a LINE L1 -741 5421 5218 307 310 80 0 chr5 175729959 175730059 -23900091 + MIR SINE MIR 155 262 0 240 279 47 87 chr5 175730128 175730300 -23899850 - L2 LINE L2 -216 3056 2892 258 95 0 0 chr5 175730522 175730564 -23899586 + (CCG)n Simple_repeat Simple_repeat 2 43 0 23 0 0 0 chr5 175730802 175730825 -23899325 + GC_rich Low_complexity Low_complexity 1 23 0 222 184 0 0 chr5 175731031 175731069 -23899081 + G-rich Low_complexity Low_complexity 1 38 0 456 252 115 22 chr5 175732204 175732343 -23897807 + MIR3 SINE MIR 36 187 -21 302 222 97 0 chr5 175732592 175732664 -23897486 - MLT1K LTR MaLR -77 511 433 2200 87 10 3 chr5 175732848 175733146 -23897004 + AluSq SINE Alu 1 300 -13 433 231 216 15 chr5 175733308 175733442 -23896708 - MIR3 SINE MIR -27 181 21 270 242 242 16 chr5 175733808 175733932 -23896218 + MIR SINE MIR 12 163 -99 842 289 18 0 chr5 175734480 175734698 -23895452 + MIR SINE MIR 39 260 -2 1474 112 85 68 chr5 175734867 175735161 -23894989 + AluSx SINE Alu 1 299 -13 399 274 144 13 chr5 175735363 175735516 -23894634 + MIR SINE MIR 47 219 -43 1344 233 74 66 chr5 175736258 175736760 -23893390 + L2 LINE L2 2808 3313 0 217 143 0 0 chr5 175736865 175736900 -23893250 - L2 LINE L2 -218 3054 3020 189 296 222 9 chr5 175737410 175737518 -23892632 - L2 LINE L2 0 3313 3183 817 152 0 0 chr5 175737538 175737663 -23892487 + FLAM_C SINE Alu 1 125 -18 706 294 52 32 chr5 175737707 175737959 -23892191 + MIR SINE MIR 4 260 -2 2038 109 10 0 chr5 175738081 175738375 -23891775 + AluSx SINE Alu 1 297 -15 258 311 72 3 chr5 175738784 175738921 -23891229 - MIR SINE MIR -73 135 19 840 300 33 4 chr5 175738996 175739236 -23890914 + MIR SINE MIR 3 249 -13 369 219 12 0 chr5 175739561 175739643 -23890507 + MER112 DNA MER1_type 1 83 -177 1060 206 27 27 chr5 175739672 175739891 -23890259 - MER20 DNA MER1_type 0 219 1 2202 99 0 3 chr5 175739986 175740290 -23889860 - AluY SINE Alu -8 303 1 247 94 0 0 chr5 175740322 175740354 -23889796 + Alu SINE Alu 1 32 -270 757 222 158 42 chr5 175740378 175740688 -23889462 + MLT1G3 LTR MaLR 3 329 -201 380 273 141 8 chr5 175740982 175741103 -23889047 - MIR SINE MIR -84 178 42 2193 261 204 20 chr5 175742373 175743192 -23886958 + L2 LINE L2 1710 2377 -936 1919 118 16 38 chr5 175743192 175743506 -23886644 + AluSq SINE Alu 1 307 -6 2193 261 204 20 chr5 175743506 175744036 -23886114 + L2 LINE L2 2377 3313 0 728 251 77 20 chr5 175744073 175744268 -23885882 - MER63A DNA MER1_type -1 209 4 1376 181 12 0 chr5 175744710 175744958 -23885192 - AluJo SINE Alu -49 263 13 355 310 109 35 chr5 175745123 175745297 -23884853 - MER5A DNA MER1_type -2 187 1 277 218 0 0 chr5 175745299 175745354 -23884796 + Tigger5 DNA MER2_type 1 55 -2268 * 351 186 0 14 chr5 175745324 175745394 -23884756 + Tigger5 DNA MER2_type 2252 2320 -3 269 253 38 13 chr5 175746402 175746481 -23883669 - L2 LINE L2 -39 3233 3153 2188 166 24 98 chr5 175746483 175747026 -23883124 + MLT1D LTR MaLR 1 503 -2 1145 191 5 14 chr5 175747273 175747483 -23882667 + AluJo SINE Alu 1 208 -104 413 100 0 17 chr5 175747485 175747545 -23882605 - L1M3 LINE L1 -414 5757 5699 1342 159 41 9 chr5 175747645 175747697 -23882453 - L1M3 LINE L1 -635 5548 5499 2202 75 3 10 chr5 175747697 175748029 -23882121 - AluY SINE Alu 0 311 5 1342 159 41 9 chr5 175748029 175748247 -23881903 - L1M3 LINE L1 -684 5499 5271 3718 178 70 34 chr5 175748272 175748822 -23881328 - L1ME1 LINE L1 -5 6161 5566 2186 104 0 7 chr5 175748822 175749129 -23881021 + AluSx SINE Alu 2 306 -6 3718 178 70 34 chr5 175749129 175749571 -23880579 - L1ME1 LINE L1 -600 5566 5141 1868 165 3 0 chr5 175749618 175749921 -23880229 + AluJo SINE Alu 1 304 -8 245 304 197 33 chr5 175750245 175750294 -23879856 - L2 LINE L2 -254 3059 3019 786 181 0 8 chr5 175750294 175750427 -23879723 - FLAM_A SINE Alu 0 133 2 245 304 197 33 chr5 175750427 175750703 -23879447 - L2 LINE L2 -294 3019 2683 3099 187 47 5 chr5 175750798 175751398 -23878752 + L1MB5 LINE L1 5491 6115 -59 215 326 105 0 chr5 175751456 175751551 -23878599 + MIR3 SINE MIR 101 205 -3 551 232 7 29 chr5 175751623 175751718 -23878432 - MER113 DNA MER1_type? -79 442 349 2768 171 35 2 chr5 175751718 175752174 -23877976 - MER70A LTR ERVL 0 472 2 551 232 7 29 chr5 175752174 175752216 -23877934 - MER113 DNA MER1_type? -172 349 308 669 195 8 0 chr5 175752245 175752373 -23877777 - FLAM_C SINE Alu 0 133 5 616 272 52 16 chr5 175752374 175752683 -23877467 - MER113 DNA MER1_type? -198 323 4 2121 119 0 0 chr5 175752770 175753073 -23877077 + AluSx SINE Alu 1 303 -9 195 127 159 63 chr5 175754839 175754902 -23875248 - MIR SINE MIR -32 230 162 651 189 28 120 chr5 175754947 175755164 -23874986 - MLT1J LTR MaLR 0 511 315 1553 176 7 26 chr5 175755221 175755523 -23874627 + AluJo SINE Alu 1 296 -16 2113 98 10 0 chr5 175755525 175755820 -23874330 + AluSx SINE Alu 1 298 -14 353 211 92 46 chr5 175756064 175756173 -23873977 + MIR3 SINE MIR 49 162 -46 1625 193 31 88 chr5 175756213 175756283 -23873867 + Charlie4a DNA MER1_type 24 96 -1865 2140 108 0 0 chr5 175756283 175756579 -23873571 - AluSx SINE Alu -16 296 1 1625 193 31 88 chr5 175756579 175757017 -23873133 + Charlie4a DNA MER1_type 96 503 -5 280 264 64 57 chr5 175757056 175757196 -23872954 + MIR SINE MIR 65 205 -57 357 211 0 0 chr5 175757761 175757840 -23872310 - AluJo SINE Alu 0 307 229 290 103 0 0 chr5 175757840 175757879 -23872271 - MSTA LTR MaLR 0 428 390 704 176 17 8 chr5 175757892 175758011 -23872139 - FLAM_C SINE Alu -22 121 2 1162 120 47 11 chr5 175758163 175758354 -23871796 - MSTA LTR MaLR -230 198 1 1247 170 22 0 chr5 175758356 175758580 -23871570 - AluJo SINE Alu -81 231 3 1965 139 0 0 chr5 175758954 175759248 -23870902 - AluSx SINE Alu -8 304 11 429 138 0 0 chr5 175759304 175759369 -23870781 + AluJ/FLAM SINE Alu 2 66 -246 1037 150 0 0 chr5 175759370 175759530 -23870620 - FRAM SINE Alu -17 159 1 592 356 14 0 chr5 175759531 175759747 -23870403 - MIR SINE MIR -26 236 18 719 245 14 0 chr5 175759748 175759895 -23870255 + MER58A DNA MER1_type 1 149 0 209 229 14 71 chr5 175760116 175760186 -23869964 + MIR SINE MIR 186 251 -11 445 239 131 23 chr5 175760782 175760912 -23869238 + MIR SINE MIR 20 163 -99 610 281 186 35 chr5 175760930 175761258 -23868892 - L2 LINE L2 -12 3301 3024 2040 93 20 40 chr5 175761258 175761558 -23868592 + AluSx SINE Alu 1 294 -18 610 281 186 35 chr5 175761558 175761730 -23868420 - L2 LINE L2 -289 3024 2879 1388 175 64 17 chr5 175761730 175762027 -23868123 - AluJo SINE Alu -1 311 1 610 281 186 35 chr5 175762027 175762092 -23868058 - L2 LINE L2 -434 2879 2647 215 278 78 22 chr5 175762094 175762184 -23867966 + MIR SINE MIR 168 262 0 714 198 1 0 chr5 175762185 175762326 -23867824 + Charlie5 DNA MER1_type 1 127 -2485 * 1117 166 61 89 chr5 175762323 175762528 -23867622 + Charlie5 DNA MER1_type 2234 2426 -198 2195 92 0 16 chr5 175762528 175762834 -23867316 + AluSx SINE Alu 1 301 -11 1117 166 61 89 chr5 175762834 175762989 -23867161 + Charlie5 DNA MER1_type 2426 2584 -40 1399 191 7 23 chr5 175762990 175763294 -23866856 + AluJo SINE Alu 1 299 -13 770 238 6 0 chr5 175763302 175763462 -23866688 + FRAM SINE Alu 1 161 -15 248 122 24 0 chr5 175763462 175763503 -23866647 + Charlie5 DNA MER1_type 2544 2585 -27 23 0 0 29 chr5 175763656 175763672 -23866478 + AT_rich Low_complexity Low_complexity 1 16 -17 1956 148 3 0 chr5 175763672 175763983 -23866167 - AluSx SINE Alu 0 312 1 23 0 0 29 chr5 175763983 175764000 -23866150 + AT_rich Low_complexity Low_complexity 16 33 0 256 300 0 9 chr5 175764420 175764530 -23865620 + (TAA)n Simple_repeat Simple_repeat 1 109 0 237 217 43 0 chr5 175764533 175764579 -23865571 - MIR SINE MIR 0 262 215 1895 122 0 17 chr5 175764590 175764884 -23865266 + AluJb SINE Alu 1 289 -23 328 233 39 87 chr5 175765528 175765631 -23864519 + L2 LINE L2 3142 3239 -33 423 179 0 191 chr5 175765724 175765808 -23864342 - MIR SINE MIR -79 183 145 722 195 23 0 chr5 175765808 175765936 -23864214 + FLAM_C SINE Alu 1 131 -2 423 179 0 191 chr5 175765936 175766019 -23864131 - MIR SINE MIR -117 145 48 1414 162 12 85 chr5 175766257 175766585 -23863565 - AluJo SINE Alu -8 304 1 248 319 160 0 chr5 175766860 175766954 -23863196 + L2 LINE L2 3205 3313 0 761 99 0 0 chr5 175767006 175767107 -23863043 + HY3 scRNA scRNA 1 101 0 2016 92 0 27 chr5 175767121 175767466 -23862684 + AluJb SINE Alu 1 337 0 473 270 86 6 chr5 175768112 175768159 -23861991 + MER5B DNA MER1_type 1 43 -135 189 0 0 0 chr5 175768159 175768180 -23861970 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 473 270 86 6 chr5 175768180 175768295 -23861855 + MER5B DNA MER1_type 43 176 -2 1275 76 0 0 chr5 175768673 175768844 -23861306 + AluSg/x SINE Alu 137 307 -5 605 285 90 5 chr5 175769931 175770131 -23860019 - MIR SINE MIR -15 247 31 1851 144 0 13 chr5 175771032 175771330 -23858820 - AluJb SINE Alu -16 296 3 844 220 37 62 chr5 175771405 175771678 -23858472 - L1ME2 LINE L1 -1 6163 5898 358 274 151 39 chr5 175772042 175772126 -23858024 + L1ME4a LINE L1 5339 5412 -752 2259 101 0 0 chr5 175772126 175772423 -23857727 + AluSg SINE Alu 1 297 -13 358 274 151 39 chr5 175772423 175772566 -23857584 + L1ME4a LINE L1 5412 5594 -570 872 181 14 74 chr5 175772584 175772741 -23857409 + MER3 DNA MER1_type 2 167 -42 1938 115 0 17 chr5 175772741 175773036 -23857114 + AluSq SINE Alu 8 297 -16 1549 134 9 122 chr5 175773046 175773382 -23856768 + AluJb SINE Alu 1 298 -4 872 181 14 74 chr5 175773382 175773428 -23856722 + MER3 DNA MER1_type 176 203 -6 260 264 58 0 chr5 175773445 175773532 -23856618 + L1ME4a LINE L1 5629 5720 -401 2502 215 78 81 chr5 175773565 175773872 -23856278 + MER21B LTR ERV1 1 307 -556 1586 171 24 13 chr5 175773872 175774170 -23855980 - AluJo SINE Alu -11 301 1 2502 215 78 81 chr5 175774170 175774619 -23855531 + MER21B LTR ERV1 307 755 -108 2007 140 0 10 chr5 175774760 175775068 -23855082 + AluSx SINE Alu 1 305 -7 263 300 122 4 chr5 175775093 175775330 -23854820 + L1ME4a LINE L1 5840 6104 -17 21 36 0 0 chr5 175775335 175775363 -23854787 + AT_rich Low_complexity Low_complexity 1 28 0 1937 161 52 3 chr5 175775891 175776239 -23853911 - MLT1A1 LTR MaLR 0 365 1 208 265 0 41 chr5 175776355 175776404 -23853746 + MER5A DNA MER1_type 143 189 0 837 286 102 55 chr5 175776632 175776671 -23853479 - L2 LINE L2 -179 3134 3098 1357 170 118 66 chr5 175776671 175777018 -23853132 + MLT1A1 LTR MaLR 1 365 0 837 286 102 55 chr5 175777018 175777698 -23852452 - L2 LINE L2 -215 3098 2374 2003 106 20 7 chr5 175778254 175778556 -23851594 - AluSg SINE Alu -4 306 1 1946 108 0 0 chr5 175778595 175778864 -23851286 - AluSx SINE Alu -2 310 42 357 137 0 0 chr5 175779040 175779091 -23851059 - AluSx SINE Alu -249 51 1 3304 154 13 9 chr5 175779138 175779663 -23850487 + MER1A DNA MER1_type 1 527 0 220 341 91 34 chr5 175779775 175779951 -23850199 - MER5A DNA MER1_type 0 189 4 265 290 29 0 chr5 175781151 175781220 -23848930 + MIR SINE MIR 186 256 -6 2038 103 7 7 chr5 175781650 175781923 -23848227 + AluSx SINE Alu 1 273 -39 527 146 0 0 chr5 175782023 175782105 -23848045 + AluSg/x SINE Alu 217 298 -14 1383 167 0 5 chr5 175782119 175782341 -23847809 - AluJo SINE Alu -6 306 86 210 91 0 0 chr5 175782564 175782597 -23847553 + (TTC)n Simple_repeat Simple_repeat 2 34 0 860 177 185 8 chr5 175783091 175783351 -23846799 - L1MD3 LINE L1 -10 7985 7680 1128 190 9 9 chr5 175783366 175783582 -23846568 - AluJo SINE Alu -48 264 49 1729 137 0 67 chr5 175783658 175783851 -23846299 - AluJo SINE Alu 0 309 143 2305 113 3 0 chr5 175783851 175784160 -23845990 - AluSx SINE Alu -2 310 1 1729 137 0 67 chr5 175784160 175784290 -23845860 - AluJo SINE Alu -166 143 6 493 231 77 0 chr5 175784578 175784724 -23845426 - FLAM_A SINE Alu 0 158 5 324 286 77 30 chr5 175785036 175785204 -23844946 + L1ME3 LINE L1 5980 6152 -10 * 1564 260 87 52 chr5 175785202 175785851 -23844299 - L1M4 LINE L1 -3563 3081 2456 2013 158 3 3 chr5 175785851 175786162 -23843988 - AluJb SINE Alu -1 311 1 1564 260 87 52 chr5 175786162 175786851 -23843299 - L1M4 LINE L1 -4188 2456 1560 2458 77 0 0 chr5 175786851 175787151 -23842999 + AluY SINE Alu 1 300 -11 1564 260 87 52 chr5 175787151 175787314 -23842836 - L1M4 LINE L1 -5084 1560 1404 1575 186 41 7 chr5 175787316 175787607 -23842543 - AluJb SINE Alu -11 301 1 23 33 0 0 chr5 175787694 175787724 -23842426 + AT_rich Low_complexity Low_complexity 1 30 0 820 242 133 17 chr5 175787846 175788193 -23841957 + L1MC4a LINE L1 6351 6737 -1071 1603 180 33 20 chr5 175788193 175788493 -23841657 + AluJb SINE Alu 1 304 -8 489 300 27 13 chr5 175788602 175788752 -23841398 - MER115 DNA AcHobo -409 284 133 207 363 0 29 chr5 175789245 175789347 -23840803 + MIR SINE MIR 110 208 -54 1886 139 0 7 chr5 175790175 175790477 -23839673 + AluSx SINE Alu 13 312 0 1458 213 45 7 chr5 175790553 175790840 -23839310 + AluJo SINE Alu 1 298 -14 2336 90 0 37 chr5 175791536 175791857 -23838293 - AluSc SINE Alu 0 309 1 1025 179 270 3 chr5 175792424 175792720 -23837430 - THE1C LTR MaLR 0 375 1 958 214 0 0 chr5 175792884 175793043 -23837107 + FAM SINE Alu 1 159 -16 21 0 0 0 chr5 175793043 175793064 -23837086 + AT_rich Low_complexity Low_complexity 1 21 0 585 255 73 25 chr5 175793499 175793703 -23836447 - MIR SINE MIR 0 262 49 204 40 0 0 chr5 175794534 175794559 -23835591 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 1919 112 54 0 chr5 175796348 175796625 -23833525 + AluSq SINE Alu 1 292 -21 2541 72 0 0 chr5 175797570 175797875 -23832275 - AluSg SINE Alu -5 305 1 239 250 56 0 chr5 175798668 175798740 -23831410 + MER103 DNA DNA 15 90 -76 626 180 62 25 chr5 175798811 175798862 -23831288 - L1MB4 LINE L1 0 6180 6132 6053 129 60 56 chr5 175798862 175799481 -23830669 - Tigger3b DNA MER2_type -1797 1231 616 1409 175 9 114 chr5 175799481 175799824 -23830326 - AluJo SINE Alu -5 307 1 6053 129 60 56 chr5 175799824 175800220 -23829930 - Tigger3b DNA MER2_type -2412 616 209 2129 134 7 7 chr5 175800220 175800527 -23829623 - AluSx SINE Alu -5 307 1 6053 129 60 56 chr5 175800527 175800737 -23829413 - Tigger3b DNA MER2_type -2819 209 1 626 180 62 25 chr5 175800737 175800846 -23829304 - L1MB4 LINE L1 -48 6132 6014 2133 134 0 0 chr5 175800846 175801144 -23829006 - AluSx SINE Alu -14 298 1 586 307 26 10 chr5 175801305 175801497 -23828653 - MIR3 SINE MIR -13 195 1 1228 173 34 0 chr5 175802313 175802521 -23827629 + AluJb SINE Alu 85 299 -13 4032 144 5 2 chr5 175803149 175803782 -23826368 - MER41B LTR ERV1 0 635 1 22 0 0 0 chr5 175803785 175803807 -23826343 + AT_rich Low_complexity Low_complexity 1 22 0 582 15 0 0 chr5 175804370 175804437 -23825713 + (CA)n Simple_repeat Simple_repeat 1 67 0 326 91 18 0 chr5 175804437 175804492 -23825658 + (TC)n Simple_repeat Simple_repeat 1 56 0 428 138 31 0 chr5 175804581 175804646 -23825504 - AluSc SINE Alu -115 194 128 2287 113 0 0 chr5 175804646 175804956 -23825194 - AluSg SINE Alu 0 310 1 1125 316 60 22 chr5 175804976 175805473 -23824677 + L2 LINE L2 1706 2221 -1093 350 139 0 165 chr5 175805473 175805588 -23824562 + L1MA8 LINE L1 6191 6286 -5 2279 107 0 0 chr5 175805647 175805938 -23824212 + AluSg SINE Alu 1 291 -19 1220 317 67 11 chr5 175806055 175806516 -23823634 + L2 LINE L2 2237 2723 -591 1970 102 8 4 chr5 175906517 175906773 -23723377 - AluSg SINE Alu -53 257 1 652 312 17 13 chr5 175906801 175907038 -23723112 + MIR SINE MIR 4 241 -21 2396 89 3 0 chr5 175907086 175907388 -23722762 + AluSg SINE Alu 1 303 -7 357 313 0 10 chr5 175907389 175907488 -23722662 - MIR SINE MIR -131 131 34 2671 121 8 59 chr5 175907510 175907919 -23722231 + MER83 LTR ERV1 1 384 -64 2377 100 0 0 chr5 175907919 175908218 -23721932 - AluSx SINE Alu -13 299 1 2671 121 8 59 chr5 175908218 175908280 -23721870 + MER83 LTR ERV1 384 448 0 547 312 117 0 chr5 175908498 175908703 -23721447 - MIR SINE MIR -21 241 13 611 257 64 5 chr5 175908779 175908966 -23721184 - Charlie8 DNA MER1_type -2183 234 37 211 208 0 21 chr5 175909248 175909296 -23720854 + CT-rich Low_complexity Low_complexity 2 48 0 975 206 110 48 chr5 175909370 175909508 -23720642 - MLT1A1 LTR MaLR -53 312 184 2278 110 3 3 chr5 175909508 175909807 -23720343 - AluSx SINE Alu -13 299 1 975 206 110 48 chr5 175909807 175909959 -23720191 - MLT1A1 LTR MaLR -181 184 4 264 308 29 0 chr5 175909988 175910110 -23720040 - MIR SINE MIR -63 145 21 1981 127 13 41 chr5 175910182 175910497 -23719653 + AluSq SINE Alu 3 308 -5 214 301 0 14 chr5 175910827 175910900 -23719250 + (CA)n Simple_repeat Simple_repeat 1 72 0 243 274 0 0 chr5 175911612 175911663 -23718487 + L2 LINE L2 3136 3186 -86 455 245 113 0 chr5 175911719 175911825 -23718325 + MIR SINE MIR 83 200 -62 247 149 0 0 chr5 175912955 175913002 -23717148 + MER117 DNA MER1_type 57 103 -94 763 236 145 38 chr5 175913079 175913122 -23717028 + MER113 DNA MER1_type? 47 84 -437 2428 91 3 0 chr5 175913122 175913419 -23716731 - AluSp SINE Alu -15 298 1 763 236 145 38 chr5 175913419 175913719 -23716431 + MER113 DNA MER1_type? 84 427 -94 251 140 20 0 chr5 175914225 175914275 -23715875 + GA-rich Low_complexity Low_complexity 1 51 0 1984 126 35 3 chr5 175914349 175914635 -23715515 - AluSc SINE Alu -14 295 1 456 246 37 37 chr5 175914670 175914804 -23715346 - MIR3 SINE MIR -3 205 72 1751 150 43 7 chr5 175914975 175915255 -23714895 + AluJo SINE Alu 1 290 -22 2371 103 3 0 chr5 175915264 175915564 -23714586 + AluSx SINE Alu 1 301 -11 590 284 6 27 chr5 175915565 175915748 -23714402 + MIR SINE MIR 21 199 -63 260 172 206 35 chr5 175915809 175915922 -23714228 + MIR SINE MIR 65 144 -64 1626 150 12 4 chr5 175915937 175916190 -23713960 + AluJb SINE Alu 37 291 -21 1863 154 0 7 chr5 175916449 175916781 -23713369 + AluJb SINE Alu 1 330 0 314 255 26 72 chr5 175916919 175917072 -23713078 + MIR SINE MIR 94 239 -23 2433 57 16 38 chr5 175917097 175917415 -23712735 - AluY SINE Alu 0 311 1 461 226 53 30 chr5 175917605 175917738 -23712412 - MIR3 SINE MIR -35 173 38 2343 92 10 3 chr5 175918097 175918400 -23711750 - AluSq SINE Alu -8 305 1 2415 90 0 3 chr5 175918566 175918878 -23711272 + AluY SINE Alu 1 311 0 571 303 118 5 chr5 175919627 175919848 -23710302 + MIR SINE MIR 16 261 -1 1097 184 33 0 chr5 175920057 175920269 -23709881 - MER20 DNA MER1_type 0 219 1 1957 147 7 0 chr5 175920288 175920594 -23709556 + AluSx SINE Alu 1 308 0 2256 110 3 0 chr5 175921109 175921401 -23708749 + AluSx SINE Alu 7 299 -13 2313 119 3 0 chr5 175922249 175922560 -23707590 + AluSx SINE Alu 1 312 0 2093 149 0 10 chr5 175922967 175923311 -23706839 + AluJb SINE Alu 1 312 0 186 238 0 0 chr5 175923439 175923481 -23706669 + MER5A DNA MER1_type 148 189 0 216 241 58 81 chr5 175923680 175923767 -23706383 - MIR3 SINE MIR -35 173 89 364 221 50 66 chr5 175924137 175924318 -23705832 + MER104 DNA MER2_type 1 178 -2 461 252 44 22 chr5 175924349 175924484 -23705666 - MIR SINE MIR -55 207 70 2570 140 50 5 chr5 175924484 175924920 -23705230 + MLT2C2 LTR ERVL 1 456 -8 180 343 95 0 chr5 175927734 175927839 -23702311 + MIR3 SINE MIR 53 167 -41 2454 71 0 0 chr5 175928519 175928824 -23701326 + AluSg SINE Alu 1 305 0 2049 154 0 0 chr5 175929380 175929673 -23700477 - AluJb SINE Alu -17 295 3 226 219 83 62 chr5 175929814 175929910 -23700240 + MIR SINE MIR 151 248 -14 * 283 200 0 0 chr5 175929877 175929927 -23700223 + L2 LINE L2 3261 3310 -3 2277 77 3 7 chr5 175930123 175930409 -23699741 + AluSg SINE Alu 2 286 -24 410 122 14 27 chr5 175930674 175930748 -23699402 + AluJo/FLAM SINE Alu 61 133 -179 2535 77 0 0 chr5 175930751 175931061 -23699089 + AluY SINE Alu 1 310 -1 828 128 0 8 chr5 175931089 175931222 -23698928 + FLAM_C SINE Alu 2 133 0 433 309 74 12 chr5 175931229 175931391 -23698759 + MIR SINE MIR 83 254 -8 2353 108 3 0 chr5 175931406 175931703 -23698447 - AluSq SINE Alu -15 298 1 1960 101 45 4 chr5 175932274 175932541 -23697609 - AluSc SINE Alu -31 278 1 550 301 84 23 chr5 175933448 175933677 -23696473 + MIR SINE MIR 5 246 -16 802 239 73 0 chr5 175933901 175934135 -23696015 - LTR16C LTR ERVL -64 427 177 211 330 0 21 chr5 175934298 175934392 -23695758 + L2 LINE L2 2919 3010 -262 565 286 8 0 chr5 175935384 175935503 -23694647 + L2 LINE L2 3153 3272 0 21 0 0 0 chr5 175935617 175935638 -23694512 + AT_rich Low_complexity Low_complexity 1 21 0 1440 267 99 29 chr5 175936598 175937500 -23692650 - L1MC4 LINE L1 0 8042 6952 1564 171 75 7 chr5 175937501 175937782 -23692368 - AluJb SINE Alu -12 300 1 982 148 66 45 chr5 175938105 175938348 -23691802 - L1MB3 LINE L1 0 6183 5936 248 237 10 72 chr5 175938472 175938569 -23691581 - L1MC5 LINE L1 -38 7923 7833 2143 122 10 7 chr5 175938913 175939207 -23690943 + AluSg SINE Alu 1 295 -15 1612 92 18 26 chr5 175939216 175939445 -23690705 + AluSg/x SINE Alu 83 309 -1 274 185 12 74 chr5 175940642 175940723 -23689427 + L2 LINE L2 3189 3264 -49 318 252 185 7 chr5 175940830 175940965 -23689185 - MIR SINE MIR -70 192 34 270 290 16 65 chr5 175940953 175941077 -23689073 + L2 LINE L2 3155 3272 0 * 892 157 8 0 chr5 175941285 175941419 -23688731 - AluJo SINE Alu -177 135 1 508 222 140 53 chr5 175941839 175942046 -23688104 + MIR SINE MIR 21 245 -17 547 283 28 17 chr5 175943422 175943586 -23686564 + MIR SINE MIR 71 239 -23 1455 154 121 25 chr5 175943586 175943721 -23686429 + AluJb SINE Alu 1 122 -190 2222 119 0 0 chr5 175943721 175944015 -23686135 + AluSx SINE Alu 3 296 -16 1455 154 121 25 chr5 175944015 175944159 -23685991 + AluJb SINE Alu 122 307 -5 547 283 28 17 chr5 175944159 175944174 -23685976 + MIR SINE MIR 239 252 -10 356 258 52 0 chr5 175944244 175944341 -23685809 + L1ME4a LINE L1 6017 6118 -3 25 0 0 0 chr5 175944914 175944939 -23685211 + AT_rich Low_complexity Low_complexity 1 25 0 257 108 0 0 chr5 175946199 175946236 -23683914 - tRNA-Gly-GGA tRNA tRNA -38 37 1 525 299 60 17 chr5 175946314 175946588 -23683562 + L1MC4a LINE L1 5562 5819 -302 2563 226 83 7 chr5 175946660 175947201 -23682949 + MER82 DNA MER2_type 3 596 -57 2444 85 0 7 chr5 175947201 175947507 -23682643 - AluSx SINE Alu -8 304 1 2563 226 83 7 chr5 175947507 175947570 -23682580 + MER82 DNA MER2_type 596 653 0 2253 128 0 0 chr5 175947735 175948031 -23682119 + AluSx SINE Alu 1 296 -16 2235 113 0 3 chr5 175948644 175948944 -23681206 - AluSx SINE Alu -13 299 1 1070 159 0 0 chr5 175949039 175949209 -23680941 - AluJb SINE Alu -9 303 134 1974 319 63 19 chr5 175949434 175949670 -23680480 + L1MB5 LINE L1 5585 5809 -365 1445 151 10 85 chr5 175949670 175949975 -23680175 + AluSq SINE Alu 1 282 -31 1974 319 63 19 chr5 175949975 175950280 -23679870 + L1MB5 LINE L1 5809 6150 -24 2119 133 0 29 chr5 175950287 175950603 -23679547 - AluSx SINE Alu -3 309 3 234 323 158 0 chr5 175950679 175950806 -23679344 + MIR SINE MIR 91 237 -25 2200 97 10 36 chr5 175951257 175951426 -23678724 - AluSq SINE Alu -12 301 142 1874 117 4 0 chr5 175951426 175951674 -23678476 - AluSp SINE Alu -19 294 46 2200 97 10 36 chr5 175951674 175951813 -23678337 - AluSq SINE Alu -171 142 1 198 170 21 21 chr5 175952959 175953006 -23677144 - L2 LINE L2 -1 3312 3266 367 291 296 0 chr5 175953184 175953407 -23676743 - L2 LINE L2 -337 2977 2689 572 300 100 18 chr5 175953663 175953883 -23676267 + MIR SINE MIR 16 253 -9 419 176 176 20 chr5 175954795 175954948 -23675202 - L1MC4 LINE L1 -6 8036 7860 1687 167 0 21 chr5 175955154 175955469 -23674681 - AluJo SINE Alu 0 309 1 207 0 0 0 chr5 175955714 175955737 -23674413 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 252 329 0 14 chr5 175955743 175955816 -23674334 - L2 LINE L2 0 3313 3242 4253 173 40 42 chr5 175955825 175956480 -23673670 + L1MB7 LINE L1 4992 5647 -537 564 15 0 0 chr5 175956480 175956545 -23673605 + (TA)n Simple_repeat Simple_repeat 1 65 0 4253 173 40 42 chr5 175956545 175957002 -23673148 + L1MB7 LINE L1 5647 6104 -80 4057 70 20 0 chr5 175957002 175957560 -23672590 - L1MA1 LINE L1 0 6302 5734 4253 173 40 42 chr5 175957560 175957587 -23672563 + L1MB7 LINE L1 6104 6130 -54 1989 167 0 0 chr5 175957587 175957893 -23672257 + AluJb SINE Alu 1 306 -6 4253 173 40 42 chr5 175957893 175957945 -23672205 + L1MB7 LINE L1 6130 6184 0 203 327 19 117 chr5 175957945 175958150 -23672000 - L2 LINE L2 -78 3194 3010 23 0 0 0 chr5 175958425 175958448 -23671702 + AT_rich Low_complexity Low_complexity 1 23 0 1593 136 139 0 chr5 175958460 175958711 -23671439 + AluSx SINE Alu 1 286 -16 263 277 51 79 chr5 175958771 175958948 -23671202 + L2 LINE L2 3141 3312 -1 2120 139 13 7 chr5 175959877 175960187 -23669963 + AluSx SINE Alu 1 312 0 195 284 92 73 chr5 175960310 175960419 -23669731 + L2 LINE L2 2976 3086 -186 191 208 0 57 chr5 175960456 175960509 -23669641 + L2 LINE L2 3264 3313 0 301 293 160 9 chr5 175960581 175960687 -23669463 + MIR SINE MIR 26 147 -115 24 0 0 0 chr5 175961626 175961650 -23668500 + AT_rich Low_complexity Low_complexity 1 24 0 209 194 0 0 chr5 175962022 175962058 -23668092 + T-rich Low_complexity Low_complexity 5 40 0 1828 65 157 8 chr5 175962107 175962368 -23667782 + AluY SINE Alu 2 301 0 247 193 96 36 chr5 175962586 175962669 -23667481 + L2 LINE L2 2974 3061 -252 374 300 76 63 chr5 175963735 175963772 -23666378 + L2 LINE L2 2997 3032 -240 2314 93 10 13 chr5 175963772 175964085 -23666065 - AluSq SINE Alu -1 312 1 374 300 76 63 chr5 175964085 175964270 -23665880 + L2 LINE L2 3032 3222 -50 727 136 88 24 chr5 175964444 175964621 -23665529 + FLAM_C SINE Alu 1 185 0 1135 194 0 0 chr5 175965410 175965601 -23664549 + 7SLRNA srpRNA srpRNA 130 320 0 314 236 0 138 chr5 175965805 175965857 -23664293 + L1MC4 LINE L1 6614 6641 -1401 1860 167 11 0 chr5 175965857 175966139 -23664011 + AluJo SINE Alu 1 285 -27 314 236 0 138 chr5 175966139 175966209 -23663941 + L1MC4 LINE L1 6641 6719 -1323 451 280 129 0 chr5 175966447 175966579 -23663571 - MIR SINE MIR -106 156 8 2051 92 50 28 chr5 175966654 175966936 -23663214 + AluSx SINE Alu 1 288 -24 375 308 59 41 chr5 175966953 175967122 -23663028 - L1ME4a LINE L1 0 6121 5950 326 280 133 0 chr5 175967173 175967316 -23662834 - MIR SINE MIR -49 213 52 1328 206 78 78 chr5 175968652 175968726 -23661424 + MLT1C LTR MaLR 6 79 -388 2254 86 7 7 chr5 175968726 175969028 -23661122 + AluSc SINE Alu 1 302 -7 1328 206 78 78 chr5 175969028 175969415 -23660735 + MLT1C LTR MaLR 78 467 0 293 260 13 39 chr5 175969430 175969507 -23660643 + MER5A DNA MER1_type 92 166 -23 236 232 61 24 chr5 175969561 175969643 -23660507 + L2 LINE L2 3229 3313 0 303 306 10 0 chr5 175970292 175970390 -23659760 + L2 LINE L2 2968 3066 -206 498 290 196 0 chr5 175970403 175970617 -23659533 + MIR SINE MIR 7 262 0 861 146 7 36 chr5 175971050 175971187 -23658963 + FLAM_C SINE Alu 1 133 0 368 224 103 0 chr5 175971202 175971318 -23658832 + L1MC4 LINE L1 7826 7953 -89 266 160 0 0 chr5 175971326 175971376 -23658774 + L1MC4 LINE L1 7993 8042 0 1136 121 6 0 chr5 175971731 175971888 -23658262 + AluSg/x SINE Alu 135 292 -18 267 347 129 24 chr5 175971969 175972217 -23657933 - L2 LINE L2 -12 3301 3028 342 262 19 37 chr5 175972320 175972427 -23657723 + L1MC5 LINE L1 7377 7481 -480 1035 174 0 0 chr5 175972490 175972666 -23657484 - AluJb SINE Alu 0 306 131 2238 99 3 7 chr5 175972675 175972969 -23657181 - AluSq SINE Alu -20 293 1 316 206 202 49 chr5 175972969 175973192 -23656958 + L1MC5 LINE L1 7506 7762 -199 287 243 67 13 chr5 175973203 175973296 -23656854 + L1MC5 LINE L1 7844 8042 0 1476 123 45 0 chr5 175973948 175974168 -23655982 - MER30 DNA MER1_type 0 230 1 678 194 0 0 chr5 175974234 175974342 -23655808 - FRAM SINE Alu -69 107 1 1635 209 40 66 chr5 175974409 175974955 -23655195 + L1ME2 LINE L1 5479 6038 -126 2173 114 3 14 chr5 175974955 175975252 -23654898 - AluSg SINE Alu -16 294 1 2384 82 7 0 chr5 175975255 175975547 -23654603 - AluSx SINE Alu -18 294 1 1635 209 40 66 chr5 175975547 175975679 -23654471 + L1ME2 LINE L1 6040 6164 0 433 275 193 5 chr5 175975693 175975900 -23654250 + L1ME4a LINE L1 5740 5985 -136 191 267 0 0 chr5 175975905 175975950 -23654200 - L2 LINE L2 0 3313 3269 2289 135 0 0 chr5 175976047 175976359 -23653791 + AluSx SINE Alu 1 312 0 2325 125 0 0 chr5 175976712 175977023 -23653127 - AluSq SINE Alu -2 311 1 318 182 10 121 chr5 175977102 175977201 -23652949 + HAL1b LINE L1 1227 1314 -34 462 18 0 0 chr5 175977210 175977265 -23652885 + (TG)n Simple_repeat Simple_repeat 2 56 0 2289 100 0 7 chr5 175978334 175978633 -23651517 - AluSc SINE Alu -12 297 1 434 273 76 20 chr5 175979204 175979402 -23650748 + MIR SINE MIR 50 260 -2 2381 93 10 0 chr5 175979511 175979812 -23650338 + AluSx SINE Alu 1 304 -8 246 286 122 0 chr5 175980728 175980826 -23649324 - L2 LINE L2 -24 3248 3139 814 267 147 29 chr5 175981883 175981995 -23648155 - L2 LINE L2 -50 3263 3166 2147 94 9 41 chr5 175981995 175982314 -23647836 + AluSg SINE Alu 1 309 -1 814 267 147 29 chr5 175982314 175982719 -23647431 - L2 LINE L2 -147 3166 2658 1632 211 101 21 chr5 175984121 175984539 -23645611 + MLT1C LTR MaLR 17 467 0 26 0 0 0 chr5 175985572 175985598 -23644552 + GC_rich Low_complexity Low_complexity 1 26 0 33 0 0 0 chr5 175986145 175986178 -23643972 + GC_rich Low_complexity Low_complexity 1 33 0 192 216 0 0 chr5 175986436 175986487 -23643663 + T-rich Low_complexity Low_complexity 1 51 0 356 299 140 0 chr5 175986846 175987003 -23643147 + MIR SINE MIR 70 248 -14 516 320 174 54 chr5 175987143 175987404 -23642746 + L1ME4a LINE L1 4396 4624 -1522 2174 101 0 7 chr5 175987404 175987711 -23642439 + AluSq SINE Alu 1 305 -8 516 320 174 54 chr5 175987711 175988320 -23641830 + L1ME4a LINE L1 4624 5371 -775 232 234 0 0 chr5 175988424 175988471 -23641679 + L1ME4a LINE L1 5529 5575 -546 22 0 0 0 chr5 175988681 175988703 -23641447 + AT_rich Low_complexity Low_complexity 1 22 0 1408 220 26 0 chr5 175988713 175988838 -23641312 + AluJo SINE Alu 1 121 -191 360 0 0 0 chr5 175988838 175988878 -23641272 + (CA)n Simple_repeat Simple_repeat 2 41 0 1408 220 26 0 chr5 175988878 175989056 -23641094 + AluJo SINE Alu 121 312 0 471 188 38 8 chr5 175989137 175989270 -23640880 + L1ME4a LINE L1 5984 6120 -1 245 246 33 0 chr5 175990198 175990259 -23639891 - L1MC4a LINE L1 -1869 5939 5877 3468 196 44 23 chr5 175990931 175991232 -23638918 + MER45B DNA AcHobo 111 404 -1177 1722 201 32 49 chr5 175991232 175991525 -23638625 - MLT1C LTR MaLR -2 465 182 2307 97 3 0 chr5 175991525 175991836 -23638314 - AluSx SINE Alu 0 312 1 1722 201 32 49 chr5 175991836 175992015 -23638135 - MLT1C LTR MaLR -285 182 1 3468 196 44 23 chr5 175992015 175992482 -23637668 + MER45B DNA AcHobo 404 895 -145 949 176 0 29 chr5 175992629 175992799 -23637351 - FRAM SINE Alu -1 165 1 353 308 54 15 chr5 175993033 175993163 -23636987 + L2 LINE L2 3137 3271 -1 1057 162 100 59 chr5 175993168 175993476 -23636674 + AluJb SINE Alu 1 319 0 209 392 40 0 chr5 175993587 175993712 -23636438 + MIR SINE MIR 82 211 -51 294 301 43 0 chr5 175993794 175993887 -23636263 + MIR3 SINE MIR 64 160 -48 429 309 96 48 chr5 175993951 175994265 -23635885 - Charlie8 DNA MER1_type -2004 413 85 998 106 11 17 chr5 175994276 175994455 -23635695 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 200 143 24 0 chr5 175994456 175994498 -23635652 + CT-rich Low_complexity Low_complexity 1 43 0 582 86 0 0 chr5 175994598 175994679 -23635471 + (TTTC)n Simple_repeat Simple_repeat 3 83 0 481 78 39 38 chr5 175995218 175995423 -23634727 + AluSg SINE Alu 1 286 -24 893 256 41 0 chr5 175995534 175995780 -23634370 - L2 LINE L2 -662 2652 2397 459 292 67 45 chr5 175995880 175996058 -23634092 + MIR SINE MIR 41 222 -40 579 246 24 153 chr5 175996083 175996184 -23633966 - L1ME4a LINE L1 -198 5923 5811 2089 104 0 22 chr5 175996184 175996501 -23633649 + AluSg SINE Alu 1 310 0 2187 91 0 7 chr5 175996511 175996809 -23633341 + AluSg SINE Alu 1 296 -14 579 246 24 153 chr5 175996809 175996821 -23633329 - L1ME4a LINE L1 -320 5801 5789 716 214 0 0 chr5 175996821 175996952 -23633198 - FLAM_A SINE Alu -2 131 1 579 246 24 153 chr5 175996952 175997193 -23632957 - L1ME4a LINE L1 -332 5789 5627 1711 245 44 42 chr5 175997193 175997712 -23632438 + MLT2B1 LTR ERVL 1 520 0 579 246 24 153 chr5 175997712 175997808 -23632342 - L1ME4a LINE L1 -494 5627 5520 2312 97 0 0 chr5 175997849 175998158 -23631992 + AluSq SINE Alu 1 309 -4 529 250 51 6 chr5 175998546 175998702 -23631448 + MIR3 SINE MIR 40 202 -6 300 203 0 54 chr5 175999268 175999342 -23630808 + Charlie8 DNA MER1_type 103 172 -2245 1087 210 28 0 chr5 175999359 175999573 -23630577 + MER58A DNA MER1_type 5 224 0 2010 103 0 37 chr5 175999768 176000068 -23630082 + AluSx SINE Alu 18 306 -6 8754 56 4 52 chr5 176100206 176102153 -23527997 + L1PA6 LINE L1 4249 6154 0 4858 147 75 13 chr5 176102755 176103601 -23526549 + MER4D LTR ERV1 1 898 -5 449 224 145 68 chr5 176103729 176104025 -23526125 + MLT1L LTR MaLR 208 437 -74 889 164 26 0 chr5 176104138 176104290 -23525860 + FRAM SINE Alu 1 155 -21 798 141 16 0 chr5 176104314 176104442 -23525708 - THE1C LTR MaLR 0 375 246 14846 67 3 19 chr5 176104619 176106646 -23523504 + L1P LINE L1 53 2048 -4098 1145 163 38 100 chr5 176106860 176107180 -23522970 + AluJb SINE Alu 3 302 0 229 320 60 0 chr5 176107418 176107518 -23522632 + MIR SINE MIR 157 262 0 521 291 47 44 chr5 176107650 176107775 -23522375 + L1ME4a LINE L1 5584 5707 -414 2294 100 0 7 chr5 176107775 176108076 -23522074 - AluY SINE Alu -12 299 1 521 291 47 44 chr5 176108076 176108225 -23521925 + L1ME4a LINE L1 5707 5859 -262 22 35 0 0 chr5 176108272 176108301 -23521849 + AT_rich Low_complexity Low_complexity 1 29 0 219 215 46 31 chr5 176108339 176108404 -23521746 + MIR SINE MIR 137 202 -60 280 343 52 0 chr5 176108480 176108614 -23521536 - L2 LINE L2 -9 3263 3123 246 309 184 0 chr5 176108754 176108890 -23521260 - MER91A DNA MER1_type -35 161 1 239 276 0 26 chr5 176110626 176110702 -23519448 + MLT1H LTR MaLR 95 168 -381 3050 82 28 60 chr5 176110931 176111432 -23518718 + L1PB2 LINE L1 5666 6150 -1 477 221 15 90 chr5 176111618 176111885 -23518265 - THE1C LTR MaLR -128 247 1 360 188 34 51 chr5 176112075 176112192 -23517958 + Charlie8 DNA MER1_type 88 202 -2215 2172 171 58 18 chr5 176113020 176113465 -23516685 + MLT1C LTR MaLR 1 463 -4 700 45 0 0 chr5 176114192 176114280 -23515870 - L1MA1 LINE L1 -4 6298 6211 1777 136 50 19 chr5 176114380 176114697 -23515453 - THE1C LTR MaLR -48 327 1 2277 125 0 0 chr5 176115195 176115498 -23514652 - AluSx SINE Alu -9 303 1 4636 178 21 18 chr5 176116082 176116968 -23513182 + L1P LINE L1 5 893 -5253 1885 158 42 3 chr5 176117073 176117195 -23512955 - MSTD LTR MaLR -69 327 211 2077 106 3 73 chr5 176117195 176117524 -23512626 - AluSx SINE Alu -6 306 1 1885 158 42 3 chr5 176117524 176117711 -23512439 - MSTD LTR MaLR -185 211 6 369 252 71 55 chr5 176117716 176117843 -23512307 - MER31B LTR ERV1 -337 129 1 232 398 0 50 chr5 176117848 176118087 -23512063 - L2 LINE L2 -196 3076 2850 1955 234 77 31 chr5 176118093 176118602 -23511548 - MLT1H LTR MaLR 0 549 18 1048 211 4 52 chr5 176118780 176119031 -23511119 + AluJo SINE Alu 60 298 -14 1358 104 0 0 chr5 176119178 176119361 -23510789 + AluSp SINE Alu 128 310 -3 212 261 29 14 chr5 176120405 176120474 -23509676 + (TG)n Simple_repeat Simple_repeat 2 71 0 1076 184 9 19 chr5 176120583 176120795 -23509355 - AluJo SINE Alu -102 210 1 2169 107 0 10 chr5 176120820 176121111 -23509039 + AluSx SINE Alu 1 288 -24 25 0 0 0 chr5 176121942 176121967 -23508183 + AT_rich Low_complexity Low_complexity 1 25 0 21 21 0 64 chr5 176122360 176122407 -23507743 + AT_rich Low_complexity Low_complexity 1 44 0 329 279 137 2 chr5 176122486 176122673 -23507477 - MIR SINE MIR 0 262 9 292 230 15 37 chr5 176122984 176123119 -23507031 + T-rich Low_complexity Low_complexity 3 134 0 2137 136 0 0 chr5 176124689 176124984 -23505166 - AluSc SINE Alu -14 295 1 431 278 52 67 chr5 176125024 176125218 -23504932 - MLT1K LTR MaLR -34 554 364 3823 106 43 5 chr5 176125658 176126244 -23503906 + Harlequin LTR ERV1 4337 4944 -3455 788 133 17 127 chr5 176126238 176126585 -23503565 + Harlequin LTR ERV1 833 1141 -5755 * 6939 107 20 15 chr5 176126583 176128176 -23501974 + Harlequin LTR ERV1 504 8399 0 994 122 43 129 chr5 176128608 176128863 -23501287 - L1MA7 LINE L1 -303 5988 5756 2158 42 0 26 chr5 176128863 176129127 -23501023 + AluY SINE Alu 1 257 -54 480 35 0 0 chr5 176129325 176129383 -23500767 + (GA)n Simple_repeat Simple_repeat 1 58 0 223 264 154 22 chr5 176129416 176129507 -23500643 - MIR SINE MIR -62 146 44 489 232 40 73 chr5 176129788 176129883 -23500267 + MIR SINE MIR 91 179 -83 1850 65 119 8 chr5 176129883 176130144 -23500006 + AluSc SINE Alu 1 290 -19 489 232 40 73 chr5 176130144 176130225 -23499925 + MIR SINE MIR 179 261 -1 198 0 0 0 chr5 176130344 176130366 -23499784 + (A)n Simple_repeat Simple_repeat 1 22 0 190 346 0 0 chr5 176130558 176130610 -23499540 + L2 LINE L2 2578 2629 -685 249 275 87 58 chr5 176131215 176131353 -23498797 + MIR3 SINE MIR 34 175 -33 27 0 0 0 chr5 176132117 176132144 -23498006 + AT_rich Low_complexity Low_complexity 1 27 0 372 22 0 0 chr5 176132318 176132363 -23497787 + (TA)n Simple_repeat Simple_repeat 1 45 0 1048 172 0 0 chr5 176132366 176132529 -23497621 + FRAM SINE Alu 1 159 -17 428 211 266 0 chr5 176132559 176132668 -23497482 - MER82 DNA MER2_type -6 647 510 1878 129 6 28 chr5 176132696 176133013 -23497137 - AluSx SINE Alu -2 310 1 583 220 53 8 chr5 176133021 176133153 -23496997 - MER82 DNA MER2_type -222 431 294 1387 198 31 42 chr5 176133282 176133636 -23496514 + L1ME2 LINE L1 5670 6019 -145 559 175 132 9 chr5 176133638 176133752 -23496398 - MER5A DNA MER1_type -59 130 3 675 218 40 17 chr5 176134004 176134178 -23495972 + LTR16C LTR ERVL 299 476 -15 2500 110 31 6 chr5 176134241 176134596 -23495554 - THE1B LTR MaLR 0 364 1 553 110 0 0 chr5 176134862 176134935 -23495215 - FRAM SINE Alu -34 142 70 490 122 84 28 chr5 176136619 176136726 -23493424 - L1MB7 LINE L1 -19 6165 6053 322 175 16 16 chr5 176136750 176136813 -23493337 - AluJ/FLAM SINE Alu -202 100 38 1642 143 18 149 chr5 176136814 176137098 -23493052 - L1MB7 LINE L1 -155 6029 5710 2413 69 0 0 chr5 176137098 176137401 -23492749 - AluY SINE Alu -8 303 1 1844 138 0 43 chr5 176137409 176137714 -23492436 - AluSx SINE Alu -16 296 5 1642 143 18 149 chr5 176137714 176137753 -23492397 - L1MB7 LINE L1 -481 5703 5661 1237 167 26 90 chr5 176137753 176138064 -23492086 - AluJo SINE Alu -21 291 1 1642 143 18 149 chr5 176138064 176138220 -23491930 - L1MB7 LINE L1 -523 5661 5604 599 178 0 0 chr5 176138220 176138321 -23491829 - FLAM_A SINE Alu -6 136 36 653 182 2 110 chr5 176138321 176138616 -23491534 - L1MB7 LINE L1 -570 5608 5363 1865 125 36 0 chr5 176138617 176138896 -23491254 - AluSp SINE Alu -20 293 5 1900 155 0 0 chr5 176138905 176139196 -23490954 - AluSx SINE Alu -21 291 1 285 29 0 0 chr5 176139209 176139243 -23490907 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 1086 137 0 0 chr5 176139283 176139444 -23490706 - AluSg/x SINE Alu -13 299 139 26860 101 37 49 chr5 176139650 176144644 -23485506 + HERV9 LTR ERV1 17 3660 -130 609 12 50 0 chr5 176144636 176144716 -23485434 + HERV9 LTR ERV1 3616 3699 -4700 * 282 94 0 57 chr5 176144824 176144877 -23485273 + AluSq/x SINE Alu 87 136 -166 2404 47 10 0 chr5 176144955 176145256 -23484894 + AluY SINE Alu 1 304 -7 2055 116 0 10 chr5 176145358 176145660 -23484490 + AluSx SINE Alu 1 299 -13 279 129 0 65 chr5 176145660 176145722 -23484428 - MER53 DNA DNA -117 72 15 2242 69 0 0 chr5 176145739 176146028 -23484122 - AluY SINE Alu -22 289 1 269 108 0 0 chr5 176146029 176146066 -23484084 - MER53 DNA DNA -152 37 1 1054 145 36 6 chr5 176146069 176146235 -23483915 + MER20 DNA MER1_type 32 202 -17 268 272 116 58 chr5 176148093 176148266 -23481884 - L2 LINE L2 -1 3312 3130 260 246 0 0 chr5 176148274 176148335 -23481815 - MIR SINE MIR -201 61 1 248 330 53 11 chr5 176149251 176149345 -23480805 + L2 LINE L2 3114 3211 -61 243 79 0 0 chr5 176149712 176149750 -23480400 + (TC)n Simple_repeat Simple_repeat 2 39 0 231 167 0 0 chr5 176150686 176150728 -23479422 + (TG)n Simple_repeat Simple_repeat 1 42 0 192 97 0 0 chr5 176151215 176151246 -23478904 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 187 330 73 37 chr5 176151349 176151458 -23478692 - L2 LINE L2 -19 3253 3141 278 223 62 80 chr5 176151927 176152039 -23478111 + L2 LINE L2 3102 3211 -102 478 275 147 63 chr5 176152198 176152580 -23477570 - MLT1H1 LTR MaLR 0 590 142 370 337 17 11 chr5 176153391 176153569 -23476581 - L1ME LINE L1 -429 5692 5514 936 172 50 10 chr5 176153972 176154170 -23475980 + AluJo SINE Alu 107 312 0 335 186 0 12 chr5 176154193 176154279 -23475871 - L1MA7 LINE L1 0 6291 6207 645 142 42 0 chr5 176154507 176154627 -23475523 - L1MA6 LINE L1 -80 6220 6096 462 340 21 0 chr5 176154675 176154816 -23475334 + MER5B DNA MER1_type 35 178 0 490 293 25 13 chr5 176155082 176155239 -23474911 - MLT1G1 LTR MaLR -7 588 430 550 260 32 13 chr5 176155334 176155488 -23474662 - MLT1H1 LTR MaLR -367 188 32 27 49 0 0 chr5 176155632 176155673 -23474477 + AT_rich Low_complexity Low_complexity 1 41 0 2156 120 0 0 chr5 176158173 176158482 -23471668 - AluSq SINE Alu -4 309 1 562 214 8 17 chr5 176158687 176158804 -23471346 + MLT1F LTR MaLR 1 116 -426 404 285 13 7 chr5 176158910 176159061 -23471089 + MER103 DNA DNA 13 164 -2 2105 111 0 7 chr5 176159141 176159439 -23470711 + AluSx SINE Alu 1 296 -16 196 353 15 0 chr5 176159445 176159513 -23470637 - L3 LINE CR1 -459 1118 1050 25 75 0 0 chr5 176159720 176159773 -23470377 + AT_rich Low_complexity Low_complexity 1 53 0 28 29 0 0 chr5 176159922 176159957 -23470193 + AT_rich Low_complexity Low_complexity 1 35 0 347 229 0 64 chr5 176159957 176160066 -23470084 - AluJb SINE Alu -1 301 200 364 163 133 10 chr5 176160207 176160305 -23469845 - L1 LINE L1 -1252 4894 4785 216 0 0 0 chr5 176160504 176160528 -23469622 + (TG)n Simple_repeat Simple_repeat 1 24 0 439 264 129 39 chr5 176160710 176160865 -23469285 + MER5A DNA MER1_type 16 184 -5 2828 164 39 30 chr5 176160939 176161094 -23469056 + MER89 LTR ERV1 4 156 -403 1759 157 7 10 chr5 176161094 176161387 -23468763 - AluJb SINE Alu -20 292 1 2828 164 39 30 chr5 176161387 176161773 -23468377 + MER89 LTR ERV1 156 550 -9 1832 138 3 23 chr5 176162341 176162645 -23467505 - AluSx SINE Alu -14 298 1 226 232 0 29 chr5 176163713 176163782 -23466368 + MER115 DNA AcHobo 597 663 -30 4742 114 86 121 chr5 176164176 176165596 -23464554 - pTR5 LTR ERV1 -3 2435 743 839 195 71 148 chr5 176166088 176166426 -23463724 + LTR8 LTR ERV1 1 312 -415 882 253 38 7 chr5 176166604 176166908 -23463242 + L1MC/D LINE L1 5210 5523 -745 1029 152 43 5 chr5 176166977 176167161 -23462989 + MER39B LTR ERV1 463 653 0 1314 158 91 82 chr5 176167161 176167245 -23462905 + L1MC3 LINE L1 6655 6737 -1048 2148 121 3 0 chr5 176167245 176167551 -23462599 - AluSx SINE Alu -5 307 1 1314 158 91 82 chr5 176167551 176167670 -23462480 + L1MC3 LINE L1 6737 6853 -932 234 0 0 0 chr5 176167670 176167696 -23462454 + (CA)n Simple_repeat Simple_repeat 1 26 0 1941 63 0 152 chr5 176167696 176168059 -23462091 + AluSc SINE Alu 1 308 -1 1314 158 91 82 chr5 176168059 176168182 -23461968 + L1MC3 LINE L1 6852 6986 -799 265 139 28 14 chr5 176168597 176168669 -23461481 + L1MD3 LINE L1 7000 7072 -923 1447 201 33 38 chr5 176168669 176168733 -23461417 - Charlie1b DNA MER1_type -2363 398 335 3868 136 36 22 chr5 176168733 176169422 -23460728 + LTR34 LTR ERV1 1 699 0 1447 201 33 38 chr5 176169422 176169756 -23460394 - Charlie1b DNA MER1_type -2426 335 2 1572 216 92 44 chr5 176169757 176170331 -23459819 + L1MC5 LINE L1 7330 7931 -30 22 0 0 30 chr5 176170813 176170829 -23459321 + AT_rich Low_complexity Low_complexity 1 16 -16 1979 146 0 0 chr5 176170829 176171137 -23459013 + AluSx SINE Alu 1 308 -4 22 0 0 30 chr5 176171137 176171153 -23458997 + AT_rich Low_complexity Low_complexity 16 32 0 693 160 0 0 chr5 176172224 176172330 -23457820 - Tigger7 DNA MER2_type 0 2487 2382 1033 221 52 5 chr5 176172331 176172544 -23457606 - Tigger7 DNA MER2_type -471 234 12 537 176 184 0 chr5 176172621 176172757 -23457393 + L1MA9 LINE L1 6119 6279 -33 2215 97 3 3 chr5 176172977 176173285 -23456865 + AluSx SINE Alu 1 308 -4 1045 161 0 0 chr5 176173285 176173453 -23456697 + AluSg/x SINE Alu 132 299 -11 267 333 85 33 chr5 176173983 176174136 -23456014 - L2 LINE L2 0 3272 3112 1766 104 26 78 chr5 176175054 176175361 -23454789 - AluSg SINE Alu -19 291 1 820 153 8 8 chr5 176175542 176175673 -23454477 + AluJo SINE Alu 94 224 -88 342 194 0 0 chr5 176175691 176175753 -23454397 + MLT1G1 LTR MaLR 534 595 0 228 257 79 30 chr5 176175795 176175896 -23454254 + LTR33 LTR ERVL 416 521 0 327 279 58 96 chr5 176176471 176176704 -23453446 + L1MC4a LINE L1 5446 5668 -453 2037 99 0 3 chr5 176176704 176176986 -23453164 - AluSx SINE Alu -19 293 13 327 279 58 96 chr5 176176986 176177061 -23453089 + L1MC4a LINE L1 5668 5744 -377 626 174 83 0 chr5 176177064 176177173 -23452977 + FLAM_C SINE Alu 1 118 -15 2192 97 7 0 chr5 176177210 176177520 -23452630 + AluSx SINE Alu 1 312 0 398 236 29 60 chr5 176177534 176177741 -23452409 + L1MC4a LINE L1 5737 5951 -170 698 242 0 0 chr5 176177874 176178006 -23452144 - FLAM_A SINE Alu -1 132 1 2001 131 0 10 chr5 176178011 176178316 -23451834 - AluSx SINE Alu -9 303 2 360 286 29 48 chr5 176179258 176179452 -23450698 - MIR SINE MIR -27 181 23 308 148 0 123 chr5 176179541 176179584 -23450566 - MIR SINE MIR -68 194 164 2257 95 3 0 chr5 176179584 176179889 -23450261 - AluSq SINE Alu -7 306 1 308 148 0 123 chr5 176179889 176179926 -23450224 - MIR SINE MIR -98 164 124 1081 181 5 0 chr5 176180152 176180357 -23449793 + L1M4 LINE L1 4843 5048 -1098 1208 158 41 14 chr5 176180393 176180614 -23449536 - pTR5 LTR ERV1 -2044 394 168 386 159 53 74 chr5 176180619 176180714 -23449436 - LTR30 LTR ERV1 -75 624 228 993 51 6 157 chr5 176180714 176180892 -23449258 - pTR5 LTR ERV1 -416 2022 1872 4551 107 14 0 chr5 176181107 176181614 -23448536 + MER41B LTR ERV1 1 520 -115 2036 138 0 6 chr5 176181614 176181926 -23448224 - AluSg SINE Alu 0 310 1 4551 107 14 0 chr5 176181926 176182043 -23448107 + MER41B LTR ERV1 520 634 -1 316 252 210 9 chr5 176182366 176182531 -23447619 + MIR SINE MIR 44 251 -11 204 235 0 0 chr5 176182618 176182669 -23447481 + A-rich Low_complexity Low_complexity 1 51 0 343 333 0 0 chr5 176183829 176183919 -23446231 + L1MC4 LINE L1 6614 6703 -1339 308 186 57 14 chr5 176183904 176183974 -23446176 + L1MCa LINE L1 1996 2068 -4358 * 2146 98 0 0 chr5 176183998 176184283 -23445867 - AluSq SINE Alu -28 285 1 813 139 8 8 chr5 176184534 176184656 -23445494 + FLAM_C SINE Alu 3 124 -19 2175 103 0 3 chr5 176184695 176184996 -23445154 - AluSq SINE Alu -13 300 1 1682 186 167 34 chr5 176184997 176185501 -23444649 + LTR49 LTR ERV1 25 595 0 375 248 109 90 chr5 176185531 176185649 -23444501 - MLT1J2 LTR MaLR -179 271 157 3451 159 18 83 chr5 176185649 176186031 -23444119 + LTR8A LTR ERV1 1 406 -321 1654 123 91 7 chr5 176186031 176186307 -23443843 + AluSg SINE Alu 1 299 -11 3451 159 18 83 chr5 176186307 176186526 -23443624 + LTR8A LTR ERV1 406 542 -185 2150 104 3 0 chr5 176186526 176186835 -23443315 + AluSq SINE Alu 1 313 0 3451 159 18 83 chr5 176186835 176187010 -23443140 + LTR8A LTR ERV1 542 727 0 375 248 109 90 chr5 176187010 176187157 -23442993 - MLT1J2 LTR MaLR -293 157 1 448 346 22 0 chr5 176187295 176187480 -23442670 - MER117 DNA MER1_type -6 191 3 265 288 12 16 chr5 176187490 176187566 -23442584 - MIR SINE MIR -58 150 72 2009 193 59 27 chr5 176187574 176188036 -23442114 + LTR2B LTR ERV1 1 490 0 187 351 65 0 chr5 176188036 176188113 -23442037 - L2 LINE L2 -31 3282 3201 1157 146 63 10 chr5 176188135 176188341 -23441809 + MER50 LTR ERV1 1 217 -517 8186 35 2 1 chr5 176189728 176190624 -23439526 + MER11D LTR ERVK 1 897 0 216 0 0 0 chr5 176190931 176190955 -23439195 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2930 3 0 0 chr5 176191121 176191432 -23438718 + AluYa5 SINE Alu 1 311 0 189 0 0 0 chr5 176191714 176191735 -23438415 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 295 300 9 18 chr5 176192545 176192655 -23437495 + CT-rich Low_complexity Low_complexity 2 110 0 2105 119 0 0 chr5 176195774 176196052 -23434098 + AluSg SINE Alu 1 278 -32 996 175 21 113 chr5 176196557 176196797 -23433353 + MER20 DNA MER1_type 1 218 -1 232 321 175 69 chr5 176196800 176197074 -23433076 + L2 LINE L2 2954 3256 -16 976 162 7 0 chr5 176197125 176197279 -23432871 - MER3 DNA MER1_type -8 201 47 224 193 35 18 chr5 176197349 176197406 -23432744 + L2 LINE L2 3255 3312 -1 579 284 36 45 chr5 176197837 176198059 -23432091 + MIR SINE MIR 36 255 -7 296 281 66 8 chr5 176198289 176198410 -23431740 - MER20 DNA MER1_type -4 215 88 863 274 142 32 chr5 176198609 176199080 -23431070 + LTR33A LTR ERVL 1 523 0 241 362 101 0 chr5 176200336 176200474 -23429676 - MIR SINE MIR -106 156 5 248 309 67 50 chr5 176201337 176201738 -23428412 + HAL1 LINE L1 1128 1535 -972 2103 141 7 0 chr5 176202083 176202389 -23427761 + AluSx SINE Alu 1 308 -4 1846 156 10 13 chr5 176202507 176202809 -23427341 + AluSx SINE Alu 1 301 -11 314 265 0 0 chr5 176204438 176204506 -23425644 - MIR3 SINE MIR -31 177 110 265 250 193 21 chr5 176205400 176205592 -23424558 - L1MEc LINE L1 -2553 3662 3438 1883 264 95 33 chr5 176205639 176205858 -23424292 - L1MEc LINE L1 -2866 3349 3145 2429 85 0 7 chr5 176205858 176206163 -23423987 - AluSp SINE Alu -10 303 1 1883 264 95 33 chr5 176206163 176207222 -23422928 - L1MEc LINE L1 -3070 3145 2025 626 109 0 22 chr5 176207726 176207818 -23422332 + AluSg/x SINE Alu 211 300 -9 6559 161 16 10 chr5 176207944 176210033 -23420117 - L1PA16 LINE L1 -5 6161 4061 376 335 13 24 chr5 176211458 176211631 -23418519 + MIR SINE MIR 23 192 -65 22 35 0 0 chr5 176211784 176211813 -23418337 + AT_rich Low_complexity Low_complexity 1 29 0 184 369 78 19 chr5 176212573 176212676 -23417474 + L2 LINE L2 3126 3234 -38 270 341 58 3 chr5 176213496 176213644 -23416506 + MIR3 SINE MIR 47 202 -6 702 154 8 8 chr5 176214732 176214849 -23415301 + MER5A DNA MER1_type 73 189 0 281 210 130 20 chr5 176214988 176215088 -23415062 + MIR3 SINE MIR 97 207 -1 224 146 0 0 chr5 176215382 176215423 -23414727 - L2 LINE L2 -5 3308 3268 1844 154 68 47 chr5 176215523 176215905 -23414245 - LTR8A LTR ERV1 0 727 338 934 86 0 123 chr5 176215913 176216076 -23414074 + FLAM_C SINE Alu 1 143 0 268 304 0 0 chr5 176216076 176216145 -23414005 + AluSg/x SINE Alu 134 202 -98 791 146 0 8 chr5 176216279 176216402 -23413748 - FLAM_A SINE Alu 0 142 21 1935 80 4 0 chr5 176217326 176217564 -23412586 + AluSp SINE Alu 1 239 -74 1297 279 48 45 chr5 176217726 176218189 -23411961 + LTR16B LTR ERVL 1 464 0 2414 93 0 3 chr5 176218285 176218595 -23411555 - AluSx SINE Alu -3 309 1 731 90 0 72 chr5 176218602 176218713 -23411437 - AluSq/x SINE Alu -180 133 31 237 310 40 50 chr5 176218787 176218887 -23411263 - MLT1K LTR MaLR -290 298 200 2267 121 0 0 chr5 176219192 176219499 -23410651 + AluSx SINE Alu 1 307 -5 2299 58 6 38 chr5 176220197 176220510 -23409640 + AluY SINE Alu 3 305 -6 1568 162 68 4 chr5 176220525 176220803 -23409347 + AluJb SINE Alu 1 296 -16 2481 72 0 3 chr5 176220830 176221136 -23409014 + AluY SINE Alu 1 305 -6 391 199 56 81 chr5 176221406 176221617 -23408533 - MER34 LTR ERV1 0 542 445 373 97 28 0 chr5 176221761 176221833 -23408317 + (TA)n Simple_repeat Simple_repeat 2 75 0 606 97 0 174 chr5 176221834 176221978 -23408172 - FLAM_C SINE Alu -18 125 7 258 252 32 81 chr5 176222221 176222344 -23407806 - MER34B LTR ERV1 -448 117 1 715 277 44 5 chr5 176222422 176222628 -23407522 + MIR SINE MIR 13 226 -36 718 283 136 45 chr5 176222728 176223177 -23406973 - L2 LINE L2 -9 3304 2815 416 285 90 19 chr5 176223184 176223621 -23406529 + LTR33 LTR ERVL 17 521 0 191 288 0 0 chr5 176223719 176223778 -23406372 + L2 LINE L2 1712 1770 -1544 288 309 158 12 chr5 176223826 176223991 -23406159 + L2 LINE L2 1974 2162 -1152 2073 137 7 0 chr5 176224068 176224360 -23405790 - AluSx SINE Alu -16 296 3 238 311 14 0 chr5 176224370 176224444 -23405706 + L2 LINE L2 2696 2770 -544 865 122 79 0 chr5 176224587 176224723 -23405427 - Tigger7 DNA MER2_type 0 2487 2341 2219 101 16 64 chr5 176224723 176225037 -23405113 + THE1B LTR MaLR 1 296 -68 1891 157 0 0 chr5 176225037 176225324 -23404826 + AluSx SINE Alu 2 288 -24 2219 101 16 64 chr5 176225324 176225385 -23404765 + THE1B LTR MaLR 296 358 -6 2289 121 3 0 chr5 176225386 176225693 -23404457 + AluSp SINE Alu 1 308 -5 3182 125 14 103 chr5 176225702 176225748 -23404402 - MER44D DNA MER2_type -2020 567 519 1777 164 0 14 chr5 176225748 176226040 -23404110 + AluJb SINE Alu 1 288 -24 3182 125 14 103 chr5 176226040 176226133 -23404017 - MER44D DNA MER2_type -2068 519 419 871 143 8 0 chr5 176226133 176226259 -23403891 + FLAM_C SINE Alu 1 127 -6 3182 125 14 103 chr5 176226259 176226740 -23403410 - MER44D DNA MER2_type -2168 419 1 1239 198 20 4 chr5 176227406 176227658 -23402492 + L1ME2 LINE L1 5604 5859 -305 1940 118 51 7 chr5 176227679 176227975 -23402175 + AluSx SINE Alu 1 309 -3 1316 99 11 0 chr5 176227982 176228164 -23401986 + AluSq SINE Alu 118 301 -12 286 233 105 0 chr5 176228165 176228251 -23401899 + L1ME2 LINE L1 5873 5967 -197 181 182 0 0 chr5 176228393 176228426 -23401724 + MIR SINE MIR 218 250 -12 930 139 0 0 chr5 176228546 176228675 -23401475 - FLAM_C SINE Alu -4 129 1 293 265 0 0 chr5 176228692 176228760 -23401390 + L2 LINE L2 3204 3271 -1 1027 144 16 37 chr5 176228870 176229057 -23401093 + MER5A DNA MER1_type 1 183 -6 2318 88 7 0 chr5 176229293 176229588 -23400562 - AluY SINE Alu -14 297 1 751 221 11 114 chr5 176229653 176229717 -23400433 - MIR SINE MIR 0 262 193 2002 133 17 3 chr5 176229717 176230010 -23400140 - AluSx SINE Alu -15 297 1 751 221 11 114 chr5 176230010 176230066 -23400084 - MIR SINE MIR -69 193 133 2176 103 13 0 chr5 176230066 176230366 -23399784 - AluSp SINE Alu -9 304 1 751 221 11 114 chr5 176230366 176230506 -23399644 - MIR SINE MIR -129 133 28 23 33 0 0 chr5 176230595 176230625 -23399525 + AT_rich Low_complexity Low_complexity 1 30 0 806 157 0 9 chr5 176230635 176230750 -23399400 + FLAM_C SINE Alu 5 118 -25 1791 176 3 3 chr5 176230780 176231075 -23399075 - AluJo SINE Alu -17 295 1 2180 122 0 6 chr5 176231137 176231448 -23398702 - AluSg SINE Alu -1 309 1 1577 39 0 0 chr5 176231700 176231878 -23398272 - L1PA8 LINE L1 -2 6170 5993 2101 120 19 10 chr5 176231891 176232200 -23397950 - AluSq SINE Alu -1 312 1 1723 162 13 26 chr5 176232247 176232549 -23397601 + AluJb SINE Alu 10 307 -5 464 355 23 0 chr5 176233752 176233924 -23396226 - MIR3 SINE MIR -7 201 26 664 144 6 156 chr5 176234079 176234239 -23395911 - AluJo SINE Alu -176 136 1 630 324 54 41 chr5 176234252 176234641 -23395509 - L2 LINE L2 0 3313 2920 2028 139 3 0 chr5 176234963 176235257 -23394893 + AluSg SINE Alu 1 295 -15 1007 269 141 52 chr5 176235659 176235981 -23394169 + L1MC5 LINE L1 5270 5562 -2246 1470 119 109 144 chr5 176235981 176236293 -23393857 + AluSx SINE Alu 2 302 0 1007 269 141 52 chr5 176236293 176236568 -23393582 + L1MC5 LINE L1 5562 5920 -1888 2168 129 3 0 chr5 176236584 176236879 -23393271 + AluSq SINE Alu 1 296 -17 221 300 25 0 chr5 176236880 176236960 -23393190 + (TA)n Simple_repeat Simple_repeat 2 83 0 1614 194 0 0 chr5 176237372 176237645 -23392505 - AluJo SINE Alu -39 273 1 1846 190 11 174 chr5 176237785 176237906 -23392244 + L1MC5 LINE L1 6643 6782 -1179 1955 131 16 42 chr5 176237906 176238038 -23392112 + AluSx SINE Alu 1 135 -177 2099 112 0 50 chr5 176238038 176238360 -23391790 + AluSx SINE Alu 1 306 -6 1955 131 16 42 chr5 176238360 176238539 -23391611 + AluSx SINE Alu 135 304 -8 1846 190 11 174 chr5 176238539 176238617 -23391533 + L1MC5 LINE L1 6782 6871 -1090 288 0 0 0 chr5 176238617 176238649 -23391501 + (TA)n Simple_repeat Simple_repeat 2 33 0 246 32 0 0 chr5 176238650 176238681 -23391469 + (GA)n Simple_repeat Simple_repeat 1 31 0 2076 73 7 0 chr5 176238681 176238953 -23391197 - AluSp SINE Alu -39 274 1 1846 190 11 174 chr5 176238953 176239320 -23390830 + L1MC5 LINE L1 6870 7295 -666 1722 167 3 3 chr5 176239320 176239608 -23390542 + AluSx SINE Alu 1 288 -24 1846 190 11 174 chr5 176239608 176239765 -23390385 + L1MC5 LINE L1 7295 7476 -485 2465 153 8 0 chr5 176239765 176240152 -23389998 - MLT1B LTR MaLR 0 390 1 1846 190 11 174 chr5 176240152 176240190 -23389960 + L1MC5 LINE L1 7476 7519 -442 1927 123 4 0 chr5 176240190 176240467 -23389683 + AluSg SINE Alu 1 278 -32 186 43 0 0 chr5 176240468 176240491 -23389659 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1846 190 11 174 chr5 176240491 176240675 -23389475 + L1MC5 LINE L1 7519 7461 -500 1921 141 10 16 chr5 176240675 176240987 -23389163 + AluSx SINE Alu 1 310 -2 1846 190 11 174 chr5 176240987 176241090 -23389060 + L1MC5 LINE L1 7460 7578 -383 1180 99 12 0 chr5 176241092 176241253 -23388897 - AluSp SINE Alu -17 296 134 2279 56 0 17 chr5 176241258 176241573 -23388577 - AluSp SINE Alu 0 311 2 1021 206 38 52 chr5 176241588 176241932 -23388218 + L1MC5 LINE L1 7586 7924 -37 234 340 115 19 chr5 176242180 176242336 -23387814 - MIR SINE MIR -72 190 20 675 196 0 29 chr5 176242486 176242668 -23387482 - AluJb SINE Alu 0 326 149 1256 164 0 18 chr5 176242668 176242894 -23387256 - AluSx SINE Alu -77 235 14 377 173 0 6 chr5 176243608 176243675 -23386475 + Alu SINE Alu 1 54 -254 1031 135 6 0 chr5 176243675 176243838 -23386312 + AluJo/FRAM SINE Alu 146 309 -3 2096 110 3 0 chr5 176243897 176244179 -23385971 + AluSx SINE Alu 5 287 -25 190 56 56 0 chr5 176244192 176244228 -23385922 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 339 134 0 175 chr5 176345215 176345312 -23284838 - MER116 DNA Mariner 0 80 1 24 32 0 0 chr5 176345393 176345424 -23284726 + AT_rich Low_complexity Low_complexity 1 31 0 492 270 103 5 chr5 176345816 176346001 -23284149 + MIR SINE MIR 52 254 -8 351 277 168 15 chr5 176346139 176346276 -23283874 - MIR3 SINE MIR -39 169 12 415 205 171 8 chr5 176346320 176346437 -23283713 + MIR SINE MIR 47 182 -80 2285 105 0 0 chr5 176346888 176347183 -23282967 + AluSx SINE Alu 1 295 -17 262 303 61 40 chr5 176347390 176347489 -23282661 - MIR3 SINE MIR -103 105 5 31423 167 5 12 chr5 176347602 176352599 -23277551 + HERVL18 LTR ERVL 902 5865 -182 450 261 87 19 chr5 176352714 176352875 -23277275 + Charlie1 DNA MER1_type 35 206 -2555 * 698 209 37 26 chr5 176352853 176353044 -23277106 + Charlie1 DNA MER1_type 2569 2761 0 343 313 30 15 chr5 176353771 176353902 -23276248 - MIR SINE MIR -70 192 60 272 313 37 15 chr5 176354139 176354273 -23275877 - MIR SINE MIR -86 176 40 18652 59 4 3 chr5 176355274 176358273 -23271877 - L1PA6 LINE L1 -144 6010 3007 1255 151 40 13 chr5 176358862 176359087 -23271063 + L1PA16 LINE L1 5927 6157 -9 181 302 48 0 chr5 176359260 176359323 -23270827 - L2 LINE L2 -2 3311 3246 278 300 206 12 chr5 176359647 176359987 -23270163 + L1ME4a LINE L1 5386 5791 -330 378 265 37 25 chr5 176360077 176360239 -23269911 + L1ME4a LINE L1 5955 6118 -3 2416 146 29 9 chr5 176360500 176360850 -23269300 + LTR18A LTR ERVL 1 357 0 2859 179 11 19 chr5 176360866 176361470 -23268680 + HERVL18 LTR ERVL 12 671 -5376 336 380 47 29 chr5 176361592 176361763 -23268387 + L2 LINE L2 3025 3198 -74 2332 168 39 5 chr5 176361869 176362304 -23267846 - L1MB5 LINE L1 0 6174 5725 1106 176 33 9 chr5 176362304 176362514 -23267636 - AluJo SINE Alu -12 300 86 485 245 61 27 chr5 176362516 176362578 -23267572 - L1MB5 LINE L1 -430 5744 5686 291 114 0 0 chr5 176362578 176362622 -23267528 + (TG)n Simple_repeat Simple_repeat 2 45 0 485 245 61 27 chr5 176362622 176362706 -23267444 - L1MB5 LINE L1 -488 5686 5593 1942 132 63 0 chr5 176363040 176363327 -23266823 - AluSx SINE Alu -7 305 1 213 288 182 8 chr5 176363447 176363579 -23266571 + MIR SINE MIR 92 246 -16 331 241 106 77 chr5 176363738 176363945 -23266205 + L2 LINE L2 2737 2949 -365 12846 106 6 22 chr5 176364336 176366414 -23263736 + L1P3 LINE L1 3 2072 -4389 732 211 0 19 chr5 176366521 176366705 -23263445 + ALR/Alpha Satellite centromeric 1 187 -404 2239 91 0 3 chr5 176366705 176366992 -23263158 + L1PA7 LINE L1 5866 6151 -3 732 211 0 19 chr5 176366992 176367091 -23263059 + ALR/Alpha Satellite centromeric 187 559 -32 1268 127 66 5 chr5 176367431 176367643 -23262507 - MSTA LTR MaLR -203 225 1 556 306 171 39 chr5 176367864 176367988 -23262162 - L2 LINE L2 -10 3303 3197 180 77 0 0 chr5 176367988 176368014 -23262136 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 556 306 171 39 chr5 176368014 176368406 -23261744 - L2 LINE L2 -116 3197 2709 209 33 33 0 chr5 176368406 176368436 -23261714 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 946 29 0 0 chr5 176368438 176368543 -23261607 - L1PA3 LINE L1 -3 6152 6048 374 41 0 0 chr5 176368543 176368592 -23261558 + L1PA4 LINE L1 5999 6047 -108 399 306 115 6 chr5 176368592 176368775 -23261375 - L2 LINE L2 -604 2710 2508 544 284 35 15 chr5 176369465 176369666 -23260484 + MLT1L LTR MaLR 409 613 -2 491 297 72 20 chr5 176369690 176369885 -23260265 - L2 LINE L2 -7 3306 3102 234 147 0 162 chr5 176369966 176370034 -23260116 + L1MC/D LINE L1 5686 5742 -2066 820 146 39 8 chr5 176370108 176370238 -23259912 + AluJo SINE Alu 2 135 -177 27 49 0 0 chr5 176370578 176370619 -23259531 + AT_rich Low_complexity Low_complexity 1 41 0 1189 209 141 15 chr5 176372259 176372522 -23257628 + AluJo SINE Alu 1 296 -6 617 315 68 45 chr5 176372922 176373468 -23256682 - L2 LINE L2 -4 3309 2752 1411 237 37 47 chr5 176373488 176373893 -23256257 - MLT1D LTR MaLR 0 505 105 1512 167 40 25 chr5 176373896 176374172 -23255978 + AluJo SINE Alu 1 280 -32 875 212 54 11 chr5 176374293 176374477 -23255673 + AluJo SINE Alu 121 312 0 558 207 18 0 chr5 176374489 176374600 -23255550 - MLT1D LTR MaLR -390 115 3 1028 301 47 50 chr5 176374609 176375031 -23255119 - L2 LINE L2 -595 2719 2299 363 289 56 0 chr5 176375393 176375483 -23254667 - MER5A DNA MER1_type -8 181 87 2713 82 37 24 chr5 176375590 176375969 -23254181 + MLT2A1 LTR ERVL 61 444 0 42574 75 15 8 chr5 176375969 176376611 -23253539 + HERVL-A1 LTR ERVL 1 637 -5017 207 0 0 0 chr5 176376611 176376634 -23253516 + (TTA)n Simple_repeat Simple_repeat 2 24 0 42574 75 15 8 chr5 176376634 176380808 -23249342 + HERVL-A1 LTR ERVL 637 4861 -793 2425 8 4 0 chr5 176380808 176381071 -23249079 - AluYa5 SINE Alu -4 307 44 42574 75 15 8 chr5 176381071 176381708 -23248442 + HERVL-A1 LTR ERVL 4861 5492 -162 7120 72 6 4 chr5 176381709 176382951 -23247199 - L1PA7 LINE L1 -3 6151 4906 1920 117 0 0 chr5 176382955 176383236 -23246914 + L1PA7 LINE L1 4639 4919 -1227 * 5332 117 19 4 chr5 176383229 176384013 -23246137 - L1P3 LINE L1 -5658 803 8 361 39 0 0 chr5 176384019 176384071 -23246079 + HERVL LTR ERVL 5480 5531 -123 4570 168 11 58 chr5 176384172 176385115 -23245035 + L1MA4A LINE L1 5404 6301 -2 902 240 64 52 chr5 176385115 176385632 -23244518 + L1M4 LINE L1 2883 3405 -2741 4334 192 47 11 chr5 176385648 176386470 -23243680 - MER21B LTR ERV1 -11 852 1 284 227 100 71 chr5 176386707 176386740 -23243410 - L1MD3 LINE L1 0 8042 8011 2261 106 33 0 chr5 176386740 176387042 -23243108 + AluSx SINE Alu 1 312 0 284 227 100 71 chr5 176387042 176387436 -23242714 - L1MD3 LINE L1 -31 8011 7608 2258 112 6 9 chr5 176388081 176388402 -23241748 + L1PA8A LINE L1 5812 6131 0 4184 96 20 0 chr5 176390164 176390705 -23239445 - MER41A LTR ERV1 0 554 3 7628 94 27 2 chr5 176390705 176391738 -23238412 - MER41A-int LTR ERV1 -1 5945 4887 5069 107 41 44 chr5 176391736 176392289 -23237861 - MER41A-int LTR ERV1 -2319 3961 3408 * 1921 135 3 16 chr5 176392289 176392593 -23237557 + AluSx SINE Alu 1 300 -12 5069 107 41 44 chr5 176392593 176393250 -23236900 - MER41A-int LTR ERV1 -2872 3408 2764 2162 130 64 63 chr5 176393237 176393716 -23236434 - MER41A-int LTR ERV1 -5326 1265 3 * 4035 92 16 0 chr5 176393885 176394430 -23235720 - MER41A LTR ERV1 0 554 1 309 346 0 39 chr5 176394625 176394729 -23235421 + L2 LINE L2 3146 3245 -27 1930 162 10 3 chr5 176395666 176395975 -23234175 + AluJo SINE Alu 2 312 0 208 254 0 18 chr5 176396131 176396186 -23233964 + GA-rich Low_complexity Low_complexity 3 56 0 3971 106 9 2 chr5 176396884 176397467 -23232683 - L1PA13 LINE L1 -2 6161 5575 571 311 140 0 chr5 176397526 176397754 -23232396 + MIR SINE MIR 3 262 0 209 318 0 0 chr5 176397891 176397976 -23232174 + MIR SINE MIR 148 232 -30 632 299 156 8 chr5 176398446 176398838 -23231312 + LTR16A LTR ERVL 1 450 0 222 304 0 0 chr5 176398957 176399013 -23231137 + (CATA)n Simple_repeat Simple_repeat 2 57 0 425 336 140 17 chr5 176399704 176400256 -23229894 - L2 LINE L2 -3 3310 2671 241 297 174 14 chr5 176400454 176400592 -23229558 + MIR3 SINE MIR 17 176 -32 379 344 25 25 chr5 176401438 176401598 -23228552 - MIR3 SINE MIR -5 203 44 305 272 74 37 chr5 176402333 176402495 -23227655 + L3 LINE CR1 1261 1428 -149 983 285 39 14 chr5 176402634 176402992 -23227158 - LTR16A LTR ERVL -6 444 78 226 322 41 58 chr5 176403098 176403219 -23226931 - MIR SINE MIR -142 120 2 535 323 21 0 chr5 176403309 176403501 -23226649 + MIR SINE MIR 18 213 -49 599 361 77 39 chr5 176403523 176404005 -23226145 + L2 LINE L2 2804 3303 -10 331 320 57 117 chr5 176404906 176405187 -23224963 - L2 LINE L2 -9 3263 3000 2308 94 3 0 chr5 176405860 176406157 -23223993 - AluSg SINE Alu -12 298 1 279 308 0 58 chr5 176408553 176408673 -23221477 + MIR3 SINE MIR 65 177 -31 475 263 53 0 chr5 176409175 176409289 -23220861 - L2 LINE L2 -2 3311 3192 422 305 218 8 chr5 176409340 176409602 -23220548 - L3 LINE CR1 -289 1288 972 227 203 31 16 chr5 176409602 176409666 -23220484 + (TAA)n Simple_repeat Simple_repeat 2 66 0 369 317 111 22 chr5 176410568 176410748 -23219402 + MIR SINE MIR 8 203 -59 752 294 0 11 chr5 176410942 176411129 -23219021 - MER5A DNA MER1_type 0 189 5 180 242 81 61 chr5 176411564 176411663 -23218487 + L3b LINE CR1 1298 1398 -185 1631 181 36 10 chr5 176411875 176412179 -23217971 + AluJb SINE Alu 1 312 0 334 313 38 46 chr5 176412329 176412460 -23217690 - L2 LINE L2 -4 3268 3139 308 381 50 0 chr5 176412538 176412698 -23217452 - MER5A DNA MER1_type -21 168 1 19968 93 7 4 chr5 176413232 176416143 -23214007 + L1P LINE L1 4 2923 -3223 13715 90 6 4 chr5 176416253 176418682 -23211468 - L1P3 LINE L1 -448 5724 3294 2260 75 4 0 chr5 176418682 176419001 -23211149 - AluY SINE Alu 0 320 1 536 286 152 41 chr5 176420596 176420886 -23209264 + MER115 DNA AcHobo 115 436 -257 753 225 34 0 chr5 176421273 176421451 -23208699 + Zaphod DNA AcHobo 3843 4026 -5 357 24 0 0 chr5 176421658 176421700 -23208450 + (TG)n Simple_repeat Simple_repeat 2 43 0 315 0 0 0 chr5 176422226 176422261 -23207889 + (CA)n Simple_repeat Simple_repeat 1 35 0 233 299 51 107 chr5 176424741 176424918 -23205232 + MER5B DNA MER1_type 11 177 -1 183 129 0 0 chr5 176425613 176425644 -23204506 + (CCA)n Simple_repeat Simple_repeat 1 31 0 243 290 142 45 chr5 176425729 176425905 -23204245 - MIR SINE MIR -50 212 20 273 98 0 0 chr5 176426085 176426126 -23204024 + (TG)n Simple_repeat Simple_repeat 2 42 0 264 261 26 39 chr5 176426138 176426291 -23203859 + (TCTCTG)n Simple_repeat Simple_repeat 2 152 0 336 341 125 28 chr5 176426313 176426706 -23203444 - MLT1K LTR MaLR -157 431 1 276 186 42 0 chr5 176426958 176427015 -23203135 + MIR SINE MIR 92 144 -64 250 306 0 0 chr5 176428367 176428429 -23201721 + MIR SINE MIR 65 126 -136 312 371 83 10 chr5 176428517 176428722 -23201428 + MIR SINE MIR 29 248 -14 2093 118 20 3 chr5 176429861 176430167 -23199983 - AluSx SINE Alu -1 311 1 359 344 31 19 chr5 176430925 176431085 -23199065 - MIR3 SINE MIR -17 191 30 300 137 0 0 chr5 176431101 176431152 -23198998 + (TG)n Simple_repeat Simple_repeat 2 52 0 359 281 0 0 chr5 176431156 176431245 -23198905 + L1MC4 LINE L1 6614 6702 -1340 2102 134 16 7 chr5 176431350 176431656 -23198494 - AluSx SINE Alu -3 309 1 370 328 35 0 chr5 176432634 176432750 -23197400 + MIR SINE MIR 32 151 -57 440 331 6 17 chr5 176432878 176433056 -23197094 + CT-rich Low_complexity Low_complexity 1 176 0 246 267 53 13 chr5 176433057 176433132 -23197018 - L2 LINE L2 -2 3270 3193 343 400 13 5 chr5 176433478 176433682 -23196468 + MIR SINE MIR 3 209 -53 369 289 23 16 chr5 176433908 176434036 -23196114 - MLT1J2 LTR MaLR -59 391 263 317 259 62 38 chr5 176434100 176434290 -23195860 - MLT1J2 LTR MaLR -287 163 1 210 197 118 26 chr5 176434346 176434422 -23195728 - MIR SINE MIR -98 164 82 216 0 0 0 chr5 176434818 176434842 -23195308 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1880 130 11 7 chr5 176434847 176435123 -23195027 - AluSx SINE Alu -35 277 1 3394 165 27 41 chr5 176436223 176436480 -23193670 - L1MB1 LINE L1 -140 6028 5769 180 0 0 0 chr5 176436480 176436500 -23193650 + (TA)n Simple_repeat Simple_repeat 1 20 0 3394 165 27 41 chr5 176436500 176437292 -23192858 - L1MB1 LINE L1 -399 5769 4992 * 3854 177 47 32 chr5 176437286 176437505 -23192645 + L1 LINE L1 4029 4243 -1903 306 0 0 0 chr5 176437505 176437539 -23192611 + (CA)n Simple_repeat Simple_repeat 2 35 0 3854 177 47 32 chr5 176437539 176438262 -23191888 + L1 LINE L1 4243 4985 -1161 225 241 126 35 chr5 176439075 176439162 -23190988 + MLT1I LTR MaLR 278 372 -37 1967 39 117 16 chr5 176439422 176439711 -23190439 - AluY SINE Alu 0 315 1 315 0 0 0 chr5 176439987 176440022 -23190128 + (CAT)n Simple_repeat Simple_repeat 2 36 0 597 326 45 16 chr5 176440069 176440314 -23189836 - MIR SINE MIR -3 259 8 332 335 11 34 chr5 176440308 176440484 -23189666 + MER5B DNA MER1_type 5 176 -2 * 203 407 71 18 chr5 176441653 176441766 -23188384 - L2 LINE L2 -4 3268 3150 1104 222 29 0 chr5 176441789 176441996 -23188154 + MER58A DNA MER1_type 12 224 0 23 0 0 0 chr5 176442103 176442126 -23188024 + AT_rich Low_complexity Low_complexity 1 23 0 400 350 70 0 chr5 176442723 176442866 -23187284 + MIR SINE MIR 106 258 -4 488 324 99 24 chr5 176443019 176443312 -23186838 - L3 LINE CR1 -4 1573 1259 325 286 24 0 chr5 176443441 176443525 -23186625 + L2 LINE L2 3186 3271 -1 377 310 47 16 chr5 176443604 176443733 -23186417 - MER5A DNA MER1_type -10 179 47 616 316 139 19 chr5 176444256 176444389 -23185761 - L2 LINE L2 -5 3308 3192 183 80 0 0 chr5 176444389 176444414 -23185736 + (CTATA)n Simple_repeat Simple_repeat 2 26 0 616 316 139 19 chr5 176444414 176444711 -23185439 - L2 LINE L2 -121 3192 2826 328 238 12 88 chr5 176444921 176445081 -23185069 + CT-rich Low_complexity Low_complexity 6 153 0 219 311 16 0 chr5 176446050 176446111 -23184039 + MIR3 SINE MIR 108 169 -39 609 280 51 9 chr5 176446470 176446684 -23183466 + L1M4 LINE L1 14 236 -6306 254 311 57 19 chr5 176446720 176446826 -23183324 + L1M4 LINE L1 396 505 -6041 360 285 97 49 chr5 176447010 176447298 -23182852 + L1M4 LINE L1 642 943 -5599 2044 241 46 35 chr5 176447315 176448105 -23182045 + L1M4 LINE L1 877 1674 -4868 1736 177 58 0 chr5 176448107 176448401 -23181749 + AluSx SINE Alu 1 311 -1 2220 245 75 40 chr5 176448568 176448730 -23181420 + L1M2b LINE L1 15 170 -7039 2391 149 68 24 chr5 176448730 176449140 -23181010 - MSTA LTR MaLR 0 428 1 2220 245 75 40 chr5 176449140 176449753 -23180397 + L1M2b LINE L1 170 817 -6392 13058 198 30 16 chr5 176449814 176450209 -23179941 + L1M2b LINE L1 1718 2106 -5102 1872 10 0 5 chr5 176450209 176450415 -23179735 + AluYa5 SINE Alu 1 205 -106 13058 198 30 16 chr5 176450415 176454700 -23175450 + L1M2b LINE L1 2106 6465 -743 392 91 0 0 chr5 176454701 176454756 -23175394 - MLT2A1 LTR ERVL 0 444 390 450 0 0 0 chr5 176454775 176454825 -23175325 + (TA)n Simple_repeat Simple_repeat 1 50 0 951 184 0 25 chr5 176454825 176455026 -23175124 + L1 LINE L1 3569 3764 -2382 272 138 46 18 chr5 176455053 176455162 -23174988 + (TA)n Simple_repeat Simple_repeat 1 112 0 2012 185 27 0 chr5 176455171 176455539 -23174611 - L1 LINE L1 -1695 4451 4074 2654 76 108 0 chr5 176455539 176455908 -23174242 - MLT2A1 LTR ERVL -13 431 23 2483 126 16 41 chr5 176456022 176456387 -23173763 + LTR18A LTR ERVL 2 357 0 460 312 75 53 chr5 176456488 176456754 -23173396 + MLT1I LTR MaLR 112 383 -26 375 289 10 19 chr5 176456996 176457100 -23173050 - MIR SINE MIR -158 104 2 191 355 136 18 chr5 176458080 176458249 -23171901 + MER5A DNA MER1_type 1 189 0 236 267 217 17 chr5 176459831 176459951 -23170199 - MIR SINE MIR -15 247 104 748 299 114 36 chr5 176460407 176460855 -23169295 + L2 LINE L2 2831 3313 0 225 236 86 132 chr5 176461382 176461556 -23168594 + MIR SINE MIR 81 246 -16 320 282 64 0 chr5 176462373 176462483 -23167667 - MIR SINE MIR -134 128 12 663 275 34 0 chr5 176463007 176463185 -23166965 + MIR SINE MIR 61 244 -18 516 283 84 45 chr5 176464017 176464265 -23165885 - MIR SINE MIR -2 260 7 517 308 129 13 chr5 176464981 176465205 -23164945 - MIR SINE MIR -11 251 2 370 252 50 42 chr5 176465662 176465781 -23164369 + L2 LINE L2 3186 3305 -8 395 298 44 37 chr5 176466088 176466310 -23163840 - MIR3 SINE MIR -13 249 15 234 260 117 0 chr5 176466833 176466910 -23163240 + MER113 DNA MER1_type? 132 217 -304 913 99 68 25 chr5 176466993 176467154 -23162996 + L1MB3 LINE L1 6014 6181 -2 262 226 36 71 chr5 176467154 176467238 -23162912 + L1MC/D LINE L1 5818 5898 -1910 24 53 0 0 chr5 176467495 176467533 -23162617 + AT_rich Low_complexity Low_complexity 1 38 0 516 247 175 0 chr5 176467627 176467781 -23162369 + MER5A DNA MER1_type 9 189 0 303 313 10 0 chr5 176467788 176467887 -23162263 + MER5B DNA MER1_type 79 178 0 351 325 8 16 chr5 176468871 176468997 -23161153 + L2 LINE L2 2678 2802 -512 250 275 75 131 chr5 176469041 176469201 -23160949 + L2 LINE L2 3122 3272 0 2670 30 3 0 chr5 176469252 176469554 -23160596 - AluY SINE Alu -8 303 1 369 308 75 128 chr5 176469998 176470358 -23159792 + L2 LINE L2 2907 3247 -25 185 330 87 0 chr5 176471239 176471342 -23158808 + MIR SINE MIR 37 148 -60 1188 217 84 51 chr5 176472174 176472506 -23157644 - MER2 DNA MER2_type 0 344 2 208 244 0 0 chr5 176472697 176472742 -23157408 + (CATATA)n Simple_repeat Simple_repeat 1 45 0 207 293 0 0 chr5 176473635 176473676 -23156474 - MIR SINE MIR -138 70 30 429 163 32 16 chr5 176474095 176474218 -23155932 + CT-rich Low_complexity Low_complexity 2 126 0 1710 161 6 67 chr5 176474222 176474552 -23155598 - AluSx SINE Alu -2 310 1 194 222 19 0 chr5 176474907 176474961 -23155189 - MIR SINE MIR -5 257 203 213 180 20 60 chr5 176475308 176475358 -23154792 - L3 LINE CR1 -19 1558 1511 332 67 0 0 chr5 176475793 176475838 -23154312 - MSTB LTR MaLR -13 419 375 615 211 200 11 chr5 176475846 176476026 -23154124 - MSTB LTR MaLR -211 215 2 718 320 148 23 chr5 176476352 176476790 -23153360 - L2 LINE L2 -17 3296 2804 265 338 79 36 chr5 176476823 176476962 -23153188 - MIR3 SINE MIR -55 153 9 448 329 48 22 chr5 176478200 176478454 -23151696 - MIR SINE MIR -5 257 6 351 291 68 34 chr5 176478433 176478581 -23151569 - MIR SINE MIR -74 188 36 * 496 234 214 32 chr5 176478666 176478820 -23151330 + MIR SINE MIR 1 182 -80 323 254 30 75 chr5 176478907 176479041 -23151109 + MIR3 SINE MIR 74 201 -7 491 238 152 37 chr5 176479530 176479694 -23150456 - MIR SINE MIR -73 189 7 352 278 8 56 chr5 176480376 176480502 -23149648 + L2 LINE L2 3179 3298 -15 213 367 0 13 chr5 176481009 176481088 -23149062 + MIR SINE MIR 22 99 -163 402 215 41 135 chr5 176481688 176481831 -23148319 + MIR SINE MIR 58 168 -94 1480 176 67 8 chr5 176481831 176482098 -23148052 + AluJo SINE Alu 9 291 -21 402 215 41 135 chr5 176482098 176482177 -23147973 + MIR SINE MIR 168 253 -9 356 240 74 58 chr5 176482196 176482317 -23147833 - LTR67 LTR ERVL -3 554 432 385 239 203 56 chr5 176482514 176482711 -23147439 - MLT1L LTR MaLR 0 511 286 231 274 68 0 chr5 176482761 176482834 -23147316 - MLT1J LTR MaLR -334 177 100 330 308 90 23 chr5 176483486 176483619 -23146531 + MIR3 SINE MIR 38 179 -29 370 326 143 11 chr5 176484713 176484888 -23145262 + MIR SINE MIR 50 247 -15 525 312 106 21 chr5 176485038 176485320 -23144830 + L2 LINE L2 3008 3313 0 222 342 13 13 chr5 176485323 176485399 -23144751 - L2 LINE L2 -55 3217 3142 234 0 0 0 chr5 176485795 176485821 -23144329 + (A)n Simple_repeat Simple_repeat 1 26 0 470 290 101 14 chr5 176486217 176486424 -23143726 + MIR SINE MIR 12 236 -26 375 217 109 36 chr5 176487181 176487319 -23142831 - L1MA10 LINE L1 -24 6310 6163 22992 91 20 3 chr5 176487632 176491735 -23138415 - L1PA7 LINE L1 -4 6150 1983 258 356 0 85 chr5 176542214 176542391 -23087759 - MIR3 SINE MIR -15 193 32 581 261 64 64 chr5 176542446 176542664 -23087486 + MIR SINE MIR 31 248 -14 210 71 0 0 chr5 176542674 176542702 -23087448 + (TTA)n Simple_repeat Simple_repeat 2 29 0 380 339 48 12 chr5 176542854 176543045 -23087105 + MIR SINE MIR 15 212 -50 232 172 35 0 chr5 176543075 176543133 -23087017 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 2749 159 15 0 chr5 176543158 176543624 -23086526 - L1MC1 LINE L1 -18 6315 5843 1144 165 88 28 chr5 176543624 176543873 -23086277 + L1MC1 LINE L1 5596 5859 -474 590 328 133 41 chr5 176543907 176544652 -23085498 + L2 LINE L2 2475 3269 -3 7198 39 14 3 chr5 176545126 176546224 -23083926 - L1PA5 LINE L1 0 6154 5056 251 251 191 15 chr5 176546843 176547173 -23082977 + L1MDa LINE L1 1449 1836 -4704 2302 243 45 26 chr5 176547208 176548057 -23082093 + L1MDa LINE L1 2765 3629 -2911 42444 41 23 2 chr5 176548272 176554285 -23075865 + L1PA6 LINE L1 9 6147 -7 1326 224 23 55 chr5 176554394 176554792 -23075358 - MLT1B LTR MaLR -2 388 4 325 266 21 0 chr5 176555008 176555102 -23075048 + MIR SINE MIR 167 262 0 333 307 26 18 chr5 176555676 176555790 -23074360 - MIR SINE MIR -78 130 16 253 275 58 14 chr5 176556205 176556274 -23073876 + MIR SINE MIR 34 105 -103 1653 194 115 14 chr5 176556614 176556979 -23073171 + MSTB LTR MaLR 1 402 -24 1407 166 0 34 chr5 176557001 176557236 -23072914 + MER1B DNA MER1_type 2 228 -69 2229 76 17 3 chr5 176557239 176557530 -23072620 - AluY SINE Alu -16 295 1 527 259 35 12 chr5 176557586 176557756 -23072394 - MER113 DNA MER1_type? -80 441 268 520 122 12 0 chr5 176557757 176557839 -23072311 - AluSc SINE Alu -226 83 1 694 74 22 111 chr5 176557839 176557974 -23072176 + MER1B DNA MER1_type 217 339 0 221 289 206 21 chr5 176558399 176558496 -23071654 - MIR3 SINE MIR -7 201 87 577 276 91 26 chr5 176558606 176558838 -23071312 + MIR SINE MIR 14 260 -2 269 289 93 10 chr5 176559031 176559128 -23071022 - MER5A DNA MER1_type -69 120 16 190 349 105 0 chr5 176559284 176559370 -23070780 - MIR SINE MIR -44 218 124 284 204 0 0 chr5 176559400 176559449 -23070701 + L2 LINE L2 3224 3272 0 7635 175 69 40 chr5 176559757 176561489 -23068661 + L1MC3 LINE L1 5997 7778 -7 996 236 49 60 chr5 176561900 176562269 -23067881 - MLT1A1 LTR MaLR 0 365 1 1413 223 0 7 chr5 176563349 176563618 -23066532 + Tigger7 DNA MER2_type 1 267 -2220 533 191 0 0 chr5 176563620 176563714 -23066436 + Tigger7 DNA MER2_type 2493 2586 -1 23 0 0 0 chr5 176564190 176564213 -23065937 + AT_rich Low_complexity Low_complexity 1 23 0 4239 156 27 15 chr5 176564221 176565024 -23065126 - L1MA4 LINE L1 -4 6296 5484 1620 221 14 8 chr5 176565695 176566057 -23064093 + MLT1A1 LTR MaLR 2 365 0 3849 123 17 10 chr5 176566113 176566714 -23063436 + L1PA16 LINE L1 5552 6156 -10 1814 147 24 61 chr5 176566719 176567128 -23063022 - Tigger3b DNA MER2_type -475 757 364 287 183 42 0 chr5 176567140 176567211 -23062939 - L1MA9 LINE L1 -191 6121 6048 1408 151 193 54 chr5 176567493 176567845 -23062305 - Tigger3b DNA MER2_type -830 401 1 1729 187 0 9 chr5 176568047 176568362 -23061788 + AluJo SINE Alu 1 312 0 209 204 62 142 chr5 176569175 176569288 -23060862 - MIR3 SINE MIR -15 193 90 3128 136 25 0 chr5 176569492 176569977 -23060173 + LOR1a LTR ERV1 1 497 0 3667 157 223 59 chr5 176570108 176571206 -23058944 + MER52C LTR ERV1 1 1278 0 28 71 0 0 chr5 176571733 176571789 -23058361 + AT_rich Low_complexity Low_complexity 1 56 0 422 168 21 0 chr5 176571959 176572054 -23058096 + L1MA8 LINE L1 6194 6290 -1 324 200 0 0 chr5 176572151 176572221 -23057929 + (TA)n Simple_repeat Simple_repeat 2 71 0 650 133 0 0 chr5 176572442 176572540 -23057610 - AluSg/x SINE Alu -5 304 207 611 200 9 0 chr5 176572541 176572656 -23057494 - AluJo/FLAM SINE Alu -186 116 1 329 263 146 18 chr5 176572896 176573067 -23057083 + LTR25 LTR ERV1 164 356 -438 273 169 0 141 chr5 176573070 176573141 -23057009 + MER61E LTR ERV1 99 159 -410 1092 137 17 6 chr5 176573249 176573424 -23056726 + MER61E LTR ERV1 342 518 -51 405 127 0 76 chr5 176573805 176573835 -23056315 - MER53 DNA DNA 0 189 158 1468 223 76 6 chr5 176573835 176574176 -23055974 + MLT1A1 LTR MaLR 1 365 0 405 127 0 76 chr5 176574176 176574224 -23055926 - MER53 DNA DNA -31 158 117 301 363 32 25 chr5 176574434 176574591 -23055559 - MIR3 SINE MIR -32 176 19 35 83 0 0 chr5 176574642 176574726 -23055424 + AT_rich Low_complexity Low_complexity 1 84 0 1141 69 0 0 chr5 176574914 176575058 -23055092 - L1PA13 LINE L1 -224 5939 5796 1467 73 0 0 chr5 176575070 176575262 -23054888 + L1PA13 LINE L1 5969 6160 -3 21 36 0 0 chr5 176577446 176577474 -23052676 + AT_rich Low_complexity Low_complexity 1 28 0 378 0 0 0 chr5 176577878 176577920 -23052230 + (GA)n Simple_repeat Simple_repeat 1 42 0 442 157 105 92 chr5 176578536 176578638 -23051512 + MLT1H LTR MaLR 1 107 -442 1894 124 57 0 chr5 176578638 176578921 -23051229 - AluSx SINE Alu -13 299 1 442 157 105 92 chr5 176578921 176578971 -23051179 + MLT1H LTR MaLR 107 155 -394 225 0 0 0 chr5 176579132 176579157 -23050993 + (TG)n Simple_repeat Simple_repeat 2 26 0 2089 118 17 0 chr5 176579165 176579454 -23050696 - AluSx SINE Alu -18 294 1 355 308 96 39 chr5 176579882 176580246 -23049904 + L1MC4a LINE L1 5539 5923 -1885 22 35 0 0 chr5 176580385 176580414 -23049736 + AT_rich Low_complexity Low_complexity 1 29 0 2227 117 0 0 chr5 176580768 176581066 -23049084 - AluSc SINE Alu -11 298 1 1929 48 8 0 chr5 176581086 176581336 -23048814 - L1MA2 LINE L1 0 6304 6053 185 154 26 0 chr5 176581665 176581704 -23048446 + CT-rich Low_complexity Low_complexity 2 41 0 572 303 87 21 chr5 176581834 176582075 -23048075 - MIR SINE MIR -1 261 5 311 105 18 0 chr5 176582200 176582257 -23047893 + (TG)n Simple_repeat Simple_repeat 2 59 0 485 297 191 13 chr5 176583232 176583455 -23046695 - MIR SINE MIR 0 262 3 777 190 42 0 chr5 176583557 176583699 -23046451 + FAM SINE Alu 18 165 -20 458 282 60 0 chr5 176583806 176583923 -23046227 - L2 LINE L2 0 3313 3190 385 289 80 38 chr5 176584107 176584346 -23045804 - MER102b DNA MER1_type -23 318 70 1034 194 24 0 chr5 176584392 176584603 -23045547 - L1MB1 LINE L1 -347 5821 5606 1937 150 11 3 chr5 176584603 176584949 -23045201 + L1MB1 LINE L1 5816 6165 -3 193 321 0 0 chr5 176585762 176585818 -23044332 + MIR SINE MIR 205 260 -2 925 161 40 15 chr5 176585821 176586020 -23044130 + L1MB2 LINE L1 5966 6169 -2 1348 151 61 59 chr5 176586191 176586681 -23043469 - L1MA4A LINE L1 -2 6298 5842 704 262 34 67 chr5 176587389 176587656 -23042494 + MIR SINE MIR 5 262 0 602 301 99 8 chr5 176588119 176588381 -23041769 + LTR16C LTR ERVL 195 480 -11 756 242 32 32 chr5 176588573 176588759 -23041391 - MER58A DNA MER1_type 0 224 39 384 294 284 10 chr5 176588986 176589180 -23040970 - MIR SINE MIR -2 260 14 2115 100 7 13 chr5 176590049 176590348 -23039802 - AluSx SINE Alu -11 301 5 308 199 83 86 chr5 176591009 176591153 -23038997 + MLT1K LTR MaLR 445 562 -26 349 283 10 10 chr5 176592075 176592174 -23037976 - MER5A DNA MER1_type -87 102 4 342 293 100 27 chr5 176592181 176592331 -23037819 + MIR3 SINE MIR 16 176 -32 826 180 0 119 chr5 176592341 176592403 -23037747 + FAM SINE Alu 2 70 -241 2107 138 0 0 chr5 176592403 176592701 -23037449 - AluSx SINE Alu -13 299 2 826 180 0 119 chr5 176592701 176592832 -23037318 + FAM SINE Alu 70 172 -3 945 122 6 28 chr5 176592850 176593031 -23037119 + (GGAA)n Simple_repeat Simple_repeat 4 180 0 801 69 40 34 chr5 176593045 176593220 -23036930 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 193 375 25 53 chr5 176593336 176593579 -23036571 + L2 LINE L2 2437 2672 -642 1929 140 20 0 chr5 176593651 176593943 -23036207 - AluSq SINE Alu -11 302 5 197 335 15 105 chr5 176594195 176594395 -23035755 + L2 LINE L2 2851 3032 -240 1116 156 125 17 chr5 176595397 176595686 -23034464 - MER33 DNA MER1_type 0 324 5 438 236 56 14 chr5 176595714 176595858 -23034292 - L1MD2 LINE L1 -2 6357 6208 180 279 0 0 chr5 176596187 176596230 -23033920 + L2 LINE L2 3220 3262 -10 428 312 195 32 chr5 176597142 176597635 -23032515 + L2 LINE L2 2400 2972 -342 285 271 47 37 chr5 176597890 176597997 -23032153 + MIR SINE MIR 35 142 -120 252 345 60 26 chr5 176598492 176598608 -23031542 - MIR SINE MIR -80 182 63 275 347 33 0 chr5 176598751 176598872 -23031278 + L1ME4a LINE L1 5513 5637 -484 1828 237 76 35 chr5 176598968 176600016 -23030134 + L1ME2 LINE L1 4842 5979 -185 2342 91 0 0 chr5 176600016 176600312 -23029838 + AluSc SINE Alu 1 296 -13 1828 237 76 35 chr5 176600312 176600394 -23029756 + L1ME2 LINE L1 5979 6056 -108 368 209 25 140 chr5 176600496 176600731 -23029419 + L1ME4a LINE L1 5823 6030 -91 2008 216 34 22 chr5 176600994 176601493 -23028657 + MLT1D LTR MaLR 1 505 0 2459 246 15 43 chr5 176602343 176603186 -23026964 - L1P LINE L1 -2452 3694 2875 1501 221 0 0 chr5 176603191 176603494 -23026656 + L1PA16 LINE L1 5861 6163 -3 539 252 0 0 chr5 176603822 176603953 -23026197 + LTR37B LTR ERV1 5 135 -333 1058 208 39 88 chr5 176603973 176604158 -23025992 - L1MA9 LINE L1 -6 7008 6815 342 0 0 0 chr5 176604158 176604196 -23025954 + (TG)n Simple_repeat Simple_repeat 1 38 0 1058 208 39 88 chr5 176604196 176604334 -23025816 - L1MA9 LINE L1 -199 6815 6672 1855 157 141 0 chr5 176604334 176604709 -23025441 + MSTA LTR MaLR 1 428 0 1058 208 39 88 chr5 176604709 176604895 -23025255 - L1MA9 LINE L1 -342 6672 2543 2242 274 55 36 chr5 176605071 176605838 -23024312 - L1MA9 LINE L1 -4161 2688 1892 2270 110 0 10 chr5 176605838 176606147 -23024003 - AluSg SINE Alu -2 308 3 2242 274 55 36 chr5 176606147 176606473 -23023677 - L1MA9 LINE L1 -4957 1892 1574 254 335 45 28 chr5 176607609 176607785 -23022365 + L2 LINE L2 3135 3313 0 277 347 112 0 chr5 176608516 176608614 -23021536 + L2 LINE L2 3150 3258 -14 21 0 0 0 chr5 176608614 176608635 -23021515 + AT_rich Low_complexity Low_complexity 1 21 0 286 344 0 11 chr5 176608680 176608770 -23021380 - MIR3 SINE MIR -5 203 115 805 258 0 59 chr5 176609123 176609344 -23020806 - MIR SINE MIR -10 252 45 389 226 25 2 chr5 176609413 176609515 -23020635 - MLT2B1 LTR ERVL -348 116 12 230 346 0 9 chr5 176609516 176609623 -23020527 + MLT1K LTR MaLR 483 588 0 1028 219 68 74 chr5 176610118 176610562 -23019588 - MLT2B1 LTR ERVL 0 414 1 1719 137 42 11 chr5 176611868 176612152 -23017998 + AluSx SINE Alu 1 293 -19 387 0 0 0 chr5 176612158 176612201 -23017949 + (CA)n Simple_repeat Simple_repeat 2 44 0 2017 120 0 36 chr5 176612208 176612517 -23017633 - AluSp SINE Alu -13 300 3 760 322 67 22 chr5 176612900 176613260 -23016890 + MLT1K LTR MaLR 17 392 -196 1997 297 174 42 chr5 176613271 176615092 -23015058 + L2 LINE L2 1225 3304 -9 282 319 49 14 chr5 176615130 176615274 -23014876 + MLT1K LTR MaLR 431 579 -9 530 311 63 11 chr5 176615281 176615471 -23014679 - MER63A DNA MER1_type 0 210 11 381 325 170 11 chr5 176615471 176615742 -23014408 - L2 LINE L2 -606 2708 2395 290 228 175 18 chr5 176616748 176616862 -23013288 - MER103 DNA DNA -23 143 12 22 0 0 0 chr5 176618303 176618325 -23011825 + AT_rich Low_complexity Low_complexity 1 22 0 204 315 67 11 chr5 176618634 176618723 -23011427 + MIR3 SINE MIR 100 193 -15 4714 194 15 8 chr5 176618874 176619212 -23010938 + L1P LINE L1 1667 2001 -4145 581 37 12 0 chr5 176619212 176619294 -23010856 + L1PA2 LINE L1 6073 6155 0 4714 194 15 8 chr5 176619294 176619933 -23010217 + L1P LINE L1 2001 2651 -3495 2940 78 81 0 chr5 176619934 176620343 -23009807 + THE1A-int LTR MaLR 1139 1580 0 2025 122 58 23 chr5 176620343 176620686 -23009464 + THE1A LTR MaLR 1 355 0 4898 92 41 16 chr5 176620686 176621424 -23008726 + L1PA12 LINE L1 5404 6159 -9 2153 258 74 53 chr5 176621437 176623285 -23006865 - L1MEc LINE L1 -3339 3602 1775 2310 174 53 53 chr5 176623285 176623790 -23006360 - MLT1D LTR MaLR 0 505 1 2153 258 74 53 chr5 176623790 176623820 -23006330 - L1MEc LINE L1 -5166 1775 1747 1886 286 67 19 chr5 176623842 176624633 -23005517 - L1MEc LINE L1 -4909 1514 686 961 293 16 43 chr5 176624797 176625241 -23004909 - L1MEc LINE L1 -5975 448 17 446 248 8 45 chr5 176625407 176625540 -23004610 - MIR SINE MIR -11 251 124 355 358 63 32 chr5 176626147 176626527 -23003623 + L2 LINE L2 2384 2775 -539 897 255 96 62 chr5 176626618 176626940 -23003210 - MLT1G3 LTR MaLR -94 436 104 600 228 29 15 chr5 176626933 176627069 -23003081 - MLT1G3 LTR MaLR -451 144 7 * 261 280 40 0 chr5 176627141 176627216 -23002934 + L2 LINE L2 3194 3271 -1 1125 229 69 39 chr5 176629191 176629554 -23000596 + MLT1A2 LTR MaLR 1 374 0 209 279 200 14 chr5 176629927 176630067 -23000083 - MIR SINE MIR -69 193 28 689 254 113 0 chr5 176630548 176630725 -22999425 - MIR SINE MIR -64 198 2 234 375 27 9 chr5 176631651 176631763 -22998387 + MER5A DNA MER1_type 7 120 -69 1508 54 0 0 chr5 176631871 176632055 -22998095 - L1P2 LINE L1 -565 5589 5406 279 330 39 0 chr5 176632296 176632399 -22997751 + MIR SINE MIR 48 154 -108 364 305 78 0 chr5 176632879 176633007 -22997143 - L2 LINE L2 -3 3310 3173 4811 168 11 1 chr5 176633626 176634456 -22995694 + L1PA15 LINE L1 5327 6164 -1 191 410 0 0 chr5 176635312 176635395 -22994755 - MIR SINE MIR -17 245 163 392 209 29 86 chr5 176635962 176636101 -22994049 + MLT1K LTR MaLR 458 588 0 197 83 28 0 chr5 176636992 176637028 -22993122 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 442 337 172 28 chr5 176637030 176637590 -22992560 - L2 LINE L2 -19 3294 2638 2154 103 0 70 chr5 176638430 176638807 -22991343 - AluSg SINE Alu 0 356 3 532 208 9 9 chr5 176639450 176639556 -22990594 - L2 LINE L2 -1 3312 3207 1335 187 25 44 chr5 176639558 176639877 -22990273 + L1MB2 LINE L1 5714 6036 -135 414 207 10 10 chr5 176639879 176639992 -22990158 - ALR/Alpha Satellite centromeric 0 113 1 1954 130 3 36 chr5 176639993 176640300 -22989850 - AluSg SINE Alu -11 299 3 482 179 45 60 chr5 176640343 176640430 -22989720 + L1MB2 LINE L1 6038 6124 -47 1867 97 112 8 chr5 176640430 176640697 -22989453 - AluSg SINE Alu -15 295 1 482 179 45 60 chr5 176640697 176640743 -22989407 + L1MB2 LINE L1 6124 6169 -2 439 299 57 51 chr5 176640808 176641122 -22989028 - L2 LINE L2 -126 3187 2872 234 340 138 46 chr5 176641217 176641499 -22988651 - L2 LINE L2 -39 3233 2926 1306 181 60 4 chr5 176641499 176641780 -22988370 - L1MB2 LINE L1 -99 6072 5776 6690 122 236 22 chr5 176642065 176643464 -22986686 - pTR5 LTR ERV1 0 2438 741 1670 208 0 10 chr5 176644680 176644993 -22985157 - AluJb SINE Alu -2 310 1 350 315 46 0 chr5 176645056 176645164 -22984986 - L2 LINE L2 -4 3309 3197 252 286 18 54 chr5 176645325 176645437 -22984713 + MIR SINE MIR 34 141 -121 261 255 87 19 chr5 176645576 176645679 -22984471 + MIR SINE MIR 35 143 -65 1917 135 3 0 chr5 176645754 176646036 -22984114 - AluSq SINE Alu -30 283 1 21 0 0 0 chr5 176646074 176646095 -22984055 + AT_rich Low_complexity Low_complexity 1 21 0 1076 252 72 12 chr5 176646520 176646841 -22983309 - MER58B DNA MER1_type -1 340 1 225 211 0 0 chr5 176646900 176646952 -22983198 + (CATA)n Simple_repeat Simple_repeat 3 54 0 128 43 0 0 chr5 176647314 176647498 -22982652 + AT_rich Low_complexity Low_complexity 1 184 0 292 268 54 36 chr5 176647822 176647990 -22982160 - L1MDa LINE L1 -4990 1416 1246 * 626 258 135 59 chr5 176647988 176648411 -22981739 - L1MDa LINE L1 -5599 797 343 3218 185 77 50 chr5 176649750 176650996 -22979154 - L1MB5 LINE L1 0 6174 4891 15066 172 23 14 chr5 176651319 176654159 -22975991 + L1M1 LINE L1 13 2877 -4688 3458 210 29 24 chr5 176654149 176655109 -22975041 + L1M1 LINE L1 4522 5486 -2079 * 4811 121 11 21 chr5 176655109 176655910 -22974240 + L1MA3 LINE L1 5505 6297 -8 113 51 0 0 chr5 176656014 176656190 -22973960 + AT_rich Low_complexity Low_complexity 1 176 0 246 192 0 0 chr5 176656552 176656604 -22973546 + (TATG)n Simple_repeat Simple_repeat 3 54 0 1054 256 72 12 chr5 176656663 176656984 -22973166 + MER58B DNA MER1_type 1 340 -1 5000 161 21 12 chr5 176657424 176657468 -22972682 + MER54A LTR ERVL 9 51 -850 2178 125 3 0 chr5 176657468 176657780 -22972370 + AluSq SINE Alu 1 313 0 5000 161 21 12 chr5 176657780 176658617 -22971533 + MER54A LTR ERVL 51 898 -3 1365 157 112 14 chr5 176658676 176659022 -22971128 - MSTA LTR MaLR 0 375 1 504 233 12 83 chr5 176659036 176659276 -22970874 - L1MEc LINE L1 -2956 3426 3204 1201 248 109 30 chr5 176659287 176659780 -22970370 - L1MC4a LINE L1 0 7808 7277 845 248 32 13 chr5 176659780 176660095 -22970055 - L1MEc LINE L1 -3186 3196 2876 1033 260 70 28 chr5 176660107 176660401 -22969749 - L1MEc LINE L1 -3597 2785 2505 2328 96 3 0 chr5 176660401 176660703 -22969447 - AluSq SINE Alu -10 303 1 1033 260 70 28 chr5 176660703 176661356 -22968794 - L1MEc LINE L1 -3877 2505 1839 309 313 61 0 chr5 176661361 176661460 -22968690 - L1MEc LINE L1 -5250 1134 1030 416 139 0 0 chr5 176661468 176661540 -22968610 - Charlie2a DNA MER1_type -1324 1538 1467 528 259 53 19 chr5 176661576 176661806 -22968344 - Charlie2 DNA MER1_type -2137 645 409 283 277 50 0 chr5 176662076 176662195 -22967955 - L1MEc LINE L1 -5208 1164 1040 344 322 76 38 chr5 176662235 176662446 -22967704 - L1MEc LINE L1 -5582 790 572 279 246 8 85 chr5 176662451 176662569 -22967581 + MLT1K LTR MaLR 480 588 0 252 322 144 52 chr5 176662675 176662849 -22967301 + L2 LINE L2 3082 3271 -1 1028 292 25 82 chr5 176662925 176663590 -22966560 + L2 LINE L2 2664 3293 -20 1968 121 0 42 chr5 176663590 176663896 -22966254 + AluSq SINE Alu 1 293 -20 1028 292 25 82 chr5 176663896 176663916 -22966234 + L2 LINE L2 3293 3313 0 186 324 44 0 chr5 176663972 176664040 -22966110 + L2 LINE L2 2664 2734 -580 235 279 12 35 chr5 176665224 176665310 -22964840 - MIR SINE MIR 0 262 179 277 100 0 0 chr5 176665318 176665358 -22964792 - MLT2C2 LTR ERVL 0 464 425 324 0 0 0 chr5 176665358 176665394 -22964756 + (TG)n Simple_repeat Simple_repeat 2 37 0 1741 177 0 16 chr5 176667254 176667559 -22962591 - AluSx SINE Alu -12 300 1 190 370 43 0 chr5 176667559 176667651 -22962499 - MIR SINE MIR -58 204 109 444 300 50 33 chr5 176667674 176667854 -22962296 + MIR SINE MIR 52 234 -28 625 312 82 80 chr5 176668333 176668683 -22961467 + L2 LINE L2 2505 2853 -460 2190 118 7 0 chr5 176668683 176668980 -22961170 - AluSq SINE Alu -14 299 1 625 312 82 80 chr5 176668980 176669411 -22960739 + L2 LINE L2 2853 3313 0 498 212 25 51 chr5 176670072 176670190 -22959960 + MER5B DNA MER1_type 1 115 -63 216 299 11 35 chr5 176670795 176670882 -22959268 + MIR SINE MIR 169 253 -9 183 235 0 0 chr5 176672032 176672083 -22958067 + GA-rich Low_complexity Low_complexity 3 53 0 513 326 128 7 chr5 176672088 176672370 -22957780 + L2 LINE L2 2992 3307 -6 21 0 0 0 chr5 176672984 176673005 -22957145 + AT_rich Low_complexity Low_complexity 1 21 0 360 331 100 0 chr5 176673316 176673587 -22956563 - L2 LINE L2 -224 3048 2748 405 299 170 0 chr5 176674305 176674452 -22955698 - MER5A DNA MER1_type -6 183 12 244 385 123 0 chr5 176674646 176674898 -22955252 + L2 LINE L2 2491 2773 -541 227 152 43 0 chr5 176675020 176675066 -22955084 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 579 297 60 7 chr5 176675071 176675559 -22954591 - MLT2F LTR ERVL -66 597 1 219 343 38 19 chr5 176675670 176675775 -22954375 + L2 LINE L2 3201 3307 -6 405 296 74 16 chr5 176675893 176676082 -22954068 + L1ME1 LINE L1 335 534 -5862 * 703 265 99 48 chr5 176676073 176676141 -22954009 + L1ME1 LINE L1 876 939 -5457 2091 129 0 3 chr5 176676141 176676428 -22953722 + AluSx SINE Alu 1 286 -26 703 265 99 48 chr5 176676428 176677094 -22953056 + L1ME1 LINE L1 939 1648 -4748 * 3320 239 39 28 chr5 176677084 176678278 -22951872 + L1M4 LINE L1 3325 4531 -1615 1358 270 90 13 chr5 176678713 176679572 -22950578 + L1ME1 LINE L1 3088 4035 -2180 3611 155 24 2 chr5 176679581 176680639 -22949511 + L1PA15 LINE L1 4800 5882 -283 833 223 0 43 chr5 176680701 176680889 -22949261 + AluJo SINE Alu 1 180 -132 1621 138 0 22 chr5 176680889 176681157 -22948993 + L1PA15 LINE L1 5883 6144 -21 1168 167 9 29 chr5 176681215 176681425 -22948725 - AluJo SINE Alu -25 287 82 407 247 6 17 chr5 176681625 176681803 -22948347 + GA-rich Low_complexity Low_complexity 4 179 0 2567 232 63 45 chr5 176681803 176682049 -22948101 + L1ME1 LINE L1 4223 4463 -1772 1181 83 0 0 chr5 176682049 176682206 -22947944 + L1PA3 LINE L1 5994 6150 -5 2567 232 63 45 chr5 176682206 176683931 -22946219 + L1ME1 LINE L1 4463 6231 -4 403 222 133 0 chr5 176685110 176685200 -22944950 - L2 LINE L2 0 3313 3212 243 273 174 12 chr5 176685701 176685774 -22944376 + MIR SINE MIR 70 130 -132 8684 100 22 21 chr5 176685774 176687059 -22943091 - HSMAR1 DNA Mariner 0 1287 2 243 273 174 12 chr5 176687059 176687146 -22943004 + MIR SINE MIR 130 256 -6 444 303 94 22 chr5 176687314 176687591 -22942559 + L1M4 LINE L1 2653 2949 -3197 44 80 0 0 chr5 176687591 176687691 -22942459 + AT_rich Low_complexity Low_complexity 1 100 0 308 298 62 19 chr5 176687692 176687950 -22942200 - L1M4 LINE L1 -3204 2942 2674 332 173 38 45 chr5 176688112 176688245 -22941905 + (TA)n Simple_repeat Simple_repeat 2 133 0 569 239 19 78 chr5 176688250 176688439 -22941711 + L1M4 LINE L1 2951 3117 -3029 2871 0 0 3 chr5 176688439 176688751 -22941399 + AluYa5 SINE Alu 1 311 0 569 239 19 78 chr5 176688751 176688870 -22941280 + L1M4 LINE L1 3117 3241 -2905 375 23 0 0 chr5 176688884 176688928 -22941222 + (CA)n Simple_repeat Simple_repeat 1 44 0 9340 111 2 26 chr5 176689035 176690582 -22939568 + HERVH LTR ERV1 1479 2987 -4726 783 150 27 0 chr5 176690576 176690723 -22939427 + HERVH LTR ERV1 3140 3290 -4423 * 7334 126 11 4 chr5 176690713 176692422 -22937728 + HERVH LTR ERV1 3492 5145 -2568 1328 129 18 5 chr5 176692419 176692643 -22937507 + HERVH LTR ERV1 5593 5819 -1894 * 2209 111 51 0 chr5 176692643 176693014 -22937136 + HERVH LTR ERV1 7324 7713 0 2451 98 128 0 chr5 176693014 176693411 -22936739 + LTR7 LTR ERV1 1 448 -2 460 194 11 32 chr5 176693616 176693709 -22936441 - FLAM_A SINE Alu -51 91 1 1542 116 5 5 chr5 176694899 176695115 -22935035 - AluSg/x SINE Alu -17 293 78 287 262 115 0 chr5 176695280 176695402 -22934748 - MLT1B LTR MaLR -254 136 1 2245 98 3 0 chr5 176695566 176695862 -22934288 - AluSp SINE Alu -16 297 1 2400 107 100 15 chr5 176696289 176696700 -22933450 + LTR7 LTR ERV1 3 448 -2 2333 117 33 0 chr5 176696702 176697095 -22933055 + HERVH LTR ERV1 1 406 -7307 8836 134 37 23 chr5 176697301 176698947 -22931203 - HERVH LTR ERV1 -5842 1871 203 342 0 0 0 chr5 176699198 176699236 -22930914 + (CA)n Simple_repeat Simple_repeat 1 38 0 1624 201 14 0 chr5 176699358 176699646 -22930504 - AluJb SINE Alu -20 292 1 199 224 35 35 chr5 176699905 176699963 -22930187 - MIR SINE MIR -130 132 75 22 70 0 0 chr5 176700094 176700137 -22930013 + AT_rich Low_complexity Low_complexity 1 43 0 262 287 30 90 chr5 176700744 176700911 -22929239 - L2 LINE L2 -5 3308 3152 972 332 26 0 chr5 176700944 176701296 -22928854 - L2 LINE L2 -134 3179 2819 183 318 116 39 chr5 176701937 176702066 -22928084 + MIR SINE MIR 34 172 -90 435 311 74 53 chr5 176702158 176702392 -22927758 + MIR SINE MIR 34 260 -2 322 314 113 73 chr5 176702442 176702946 -22927204 - LTR67 LTR ERVL -18 539 16 300 299 76 54 chr5 176704379 176704563 -22925587 + L1MEd LINE L1 900 1087 -5032 407 292 109 27 chr5 176704600 176705122 -22925028 + L1MEd LINE L1 1132 1731 -4435 387 0 0 0 chr5 176705316 176705359 -22924791 + (TCTA)n Simple_repeat Simple_repeat 1 43 0 1085 206 38 14 chr5 176705391 176705682 -22924468 + L1 LINE L1 3439 3736 -2410 6448 202 55 25 chr5 176705801 176707946 -22922204 + L1P4 LINE L1 3543 5761 -405 1648 131 8 12 chr5 176707946 176708198 -22921952 - AluSx SINE Alu -14 298 48 6448 202 55 25 chr5 176708198 176708262 -22921888 + L1P4 LINE L1 5761 5822 -344 411 163 43 60 chr5 176708259 176708392 -22921758 - L1P LINE L1 -2033 4113 3499 * 1378 100 19 14 chr5 176708535 176708745 -22921405 - L1PA10 LINE L1 -12 6156 5946 369 376 26 18 chr5 176708747 176709090 -22921060 - L1M4 LINE L1 -3628 2518 2173 818 234 47 58 chr5 176709407 176709920 -22920230 + L1MC5 LINE L1 7405 7911 -50 370 214 48 69 chr5 176710066 176710211 -22919939 + L1MC5 LINE L1 6991 7132 -829 569 153 0 0 chr5 176710211 176710296 -22919854 - AluJ/FLAM SINE Alu -227 85 1 522 279 74 46 chr5 176710668 176711170 -22918980 + L1MC5 LINE L1 7351 7866 -95 240 269 106 19 chr5 176711880 176711984 -22918166 + MIR SINE MIR 131 243 -19 617 345 81 50 chr5 176712040 176712215 -22917935 + MLT1K LTR MaLR 10 178 -410 966 186 85 5 chr5 176712215 176712414 -22917736 - MER20 DNA MER1_type 0 219 5 617 345 81 50 chr5 176712414 176712760 -22917390 + MLT1K LTR MaLR 178 547 -41 532 79 0 13 chr5 176713057 176713133 -22917017 + MADE1 DNA Mariner 5 79 -1 479 298 63 5 chr5 176713991 176714182 -22915968 - MIR SINE MIR -15 247 46 1245 208 143 46 chr5 176718212 176718625 -22911525 - MSTB2 LTR MaLR -4 453 1 190 348 29 14 chr5 176718800 176718869 -22911281 + MIR SINE MIR 13 82 -180 728 305 129 31 chr5 176718872 176719259 -22910891 - MLT1J2 LTR MaLR 0 450 26 274 239 130 11 chr5 176719283 176719375 -22910775 + MIR SINE MIR 81 183 -79 323 410 84 23 chr5 176720587 176721029 -22909121 + L2 LINE L2 2804 3272 0 723 187 0 8 chr5 176721224 176721347 -22908803 + AluJb SINE Alu 1 122 -190 496 148 0 0 chr5 176721377 176721465 -22908685 + AluJ/FRAM SINE Alu 221 308 -4 1805 138 44 70 chr5 176722326 176722711 -22907439 - THE1C LTR MaLR 0 375 1 297 75 0 0 chr5 176722750 176722790 -22907360 + (CA)n Simple_repeat Simple_repeat 1 40 0 235 299 52 10 chr5 176723291 176723388 -22906762 + MIR SINE MIR 162 262 0 499 132 0 114 chr5 176723844 176723958 -22906192 + LTR7 LTR ERV1 1 101 -349 6791 112 12 46 chr5 176723958 176725120 -22905030 + HERVH LTR ERV1 1 1123 -6590 9533 200 63 48 chr5 176725236 176728166 -22901984 + HERVH LTR ERV1 2173 5145 -2568 1338 132 18 22 chr5 176728163 176728391 -22901759 + HERVH LTR ERV1 5593 5819 -1894 * 2320 111 48 13 chr5 176728389 176728768 -22901382 + HERVH LTR ERV1 7322 7713 0 2608 88 96 10 chr5 176728768 176729175 -22900975 + LTR7 LTR ERV1 1 442 -8 315 313 108 28 chr5 176729188 176729437 -22900713 - L2 LINE L2 -527 2787 2519 287 65 22 0 chr5 176729693 176729739 -22900411 + (GAAA)n Simple_repeat Simple_repeat 4 50 0 233 365 40 0 chr5 176730008 176730082 -22900068 + L3 LINE CR1 1405 1481 -96 24 32 0 0 chr5 176730229 176730260 -22899890 + AT_rich Low_complexity Low_complexity 1 31 0 196 188 0 0 chr5 176730449 176730481 -22899669 - MIR SINE MIR -57 151 120 547 261 173 18 chr5 176730556 176730782 -22899368 + MIR SINE MIR 2 262 0 24 32 0 0 chr5 176731171 176731202 -22898948 + AT_rich Low_complexity Low_complexity 1 31 0 195 206 32 79 chr5 176731346 176731409 -22898741 - MIR SINE MIR -132 76 17 207 358 0 0 chr5 176731819 176731886 -22898264 + L2 LINE L2 3193 3259 -13 320 265 132 22 chr5 176731913 176732049 -22898101 + MIR SINE MIR 65 215 -47 599 282 62 13 chr5 176732554 176732780 -22897370 + MIR SINE MIR 22 257 -5 1201 223 4 12 chr5 176735051 176735333 -22894817 + AluJo SINE Alu 40 319 0 180 300 250 0 chr5 176735845 176735945 -22894205 - MIR SINE MIR -26 236 112 276 338 37 14 chr5 176736083 176736225 -22893925 + MIR SINE MIR 1 145 -63 364 223 160 0 chr5 176739668 176739762 -22890388 - MER5A DNA MER1_type -77 112 4 2365 76 3 22 chr5 176739860 176740174 -22889976 - AluY SINE Alu -3 308 1 1098 267 17 3 chr5 176740258 176740614 -22889536 + L1 LINE L1 3268 3628 -2518 5152 150 35 15 chr5 176740614 176741751 -22888399 + L1PB3 LINE L1 4991 6147 -7 1160 167 35 12 chr5 176742083 176742340 -22887810 - L1MA8 LINE L1 -1 6290 6028 3277 115 9 22 chr5 176742340 176742884 -22887266 - L1MA5A LINE L1 0 6297 5757 1739 195 5 55 chr5 176742893 176743293 -22886857 - L1MA7 LINE L1 -252 6039 5660 2416 78 0 0 chr5 176743697 176743992 -22886158 - AluSc SINE Alu -14 295 1 259 307 14 15 chr5 176744282 176744392 -22885758 - MIR SINE MIR -33 175 66 259 271 85 51 chr5 176744502 176744620 -22885530 - MIR SINE MIR -57 151 30 720 205 0 98 chr5 176744834 176745039 -22885111 - MER20 DNA MER1_type -1 218 34 182 188 128 111 chr5 176745128 176745245 -22884905 - MIR SINE MIR -56 206 88 241 239 14 28 chr5 176745420 176745491 -22884659 - MIR SINE MIR -61 147 91 287 324 57 9 chr5 176745539 176745644 -22884506 + L2 LINE L2 3204 3313 0 341 271 74 8 chr5 176746543 176746665 -22883485 - MLT1K LTR MaLR -41 547 418 268 268 120 29 chr5 176747612 176747750 -22882400 - MIR SINE MIR -62 146 26 236 250 13 0 chr5 176748876 176748952 -22881198 + L1M LINE L1 5346 5422 -699 303 288 0 0 chr5 176750177 176750257 -22879893 + MLT1K LTR MaLR 501 580 -8 1542 201 18 78 chr5 176750386 176750784 -22879366 - MLT1A2 LTR MaLR 0 374 1 411 332 77 24 chr5 176750824 176751071 -22879079 - MIR SINE MIR 0 262 3 950 212 38 4 chr5 176751910 176752146 -22878004 - MLT1C LTR MaLR -129 338 95 814 300 72 30 chr5 176753228 176753628 -22876522 - MLT1K LTR MaLR -116 472 56 443 259 67 7 chr5 176753644 176753779 -22876371 - MER97a DNA MER1_type? -712 182 40 264 314 0 35 chr5 176754024 176754110 -22876040 - MIR SINE MIR -58 150 68 6515 119 4 14 chr5 176754265 176755212 -22874938 - THE1B-int LTR MaLR -642 938 1 2135 115 75 26 chr5 176755212 176755559 -22874591 - THE1B LTR MaLR 0 364 1 272 322 41 20 chr5 176755757 176755903 -22874247 - MER5A DNA MER1_type 0 189 41 1900 254 82 34 chr5 176755942 176756820 -22873330 - L2 LINE L2 0 3313 2410 1601 222 32 22 chr5 176757208 176757577 -22872573 + MLT2D LTR ERVL 42 414 0 244 225 42 28 chr5 176758967 176759038 -22871112 + CT-rich Low_complexity Low_complexity 1 72 0 340 222 54 135 chr5 176760013 176760198 -22869952 + MER102b DNA MER1_type 166 335 -6 227 326 87 11 chr5 176761813 176761905 -22868245 + L2 LINE L2 3163 3261 -11 380 349 52 26 chr5 176762348 176762577 -22867573 - MIR SINE MIR 0 262 28 21 0 0 0 chr5 176762683 176762704 -22867446 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 176763196 176763218 -22866932 + (CAAAAA)n Simple_repeat Simple_repeat 1 22 0 306 107 0 0 chr5 176764026 176764082 -22866068 + (TG)n Simple_repeat Simple_repeat 1 56 0 22 35 0 0 chr5 176764180 176764209 -22865941 + AT_rich Low_complexity Low_complexity 1 29 0 222 207 0 0 chr5 176764860 176764918 -22865232 + (TA)n Simple_repeat Simple_repeat 2 59 0 21 0 0 0 chr5 176765180 176765201 -22864949 + AT_rich Low_complexity Low_complexity 1 21 0 250 283 54 0 chr5 176768832 176768924 -22861226 + MIR SINE MIR 102 198 -64 314 295 151 7 chr5 176770258 176770397 -22859753 - MIR SINE MIR -51 211 53 196 375 38 0 chr5 176770800 176770880 -22859270 + MIR3 SINE MIR 92 174 -34 271 372 8 16 chr5 176770900 176771021 -22859129 - L2 LINE L2 0 3272 3153 184 327 84 9 chr5 176771040 176771147 -22859003 + MIR SINE MIR 34 148 -114 6921 63 18 0 chr5 176771534 176772609 -22857541 - L1PA7 LINE L1 -5 6149 5069 422 303 14 56 chr5 176772622 176772764 -22857386 + L2 LINE L2 3137 3272 0 366 315 98 7 chr5 176773046 176773189 -22856961 - MIR SINE MIR -48 214 59 181 243 29 0 chr5 176773844 176773914 -22856236 + CT-rich Low_complexity Low_complexity 2 73 0 228 250 0 0 chr5 176773942 176774010 -22856140 + MLT1L LTR MaLR 544 611 -4 280 360 0 0 chr5 176774651 176774737 -22855413 - MIR SINE MIR -58 150 65 742 257 27 0 chr5 176774864 176775047 -22855103 - MER5A DNA MER1_type 0 189 2 609 315 68 17 chr5 176775185 176775420 -22854730 - MIR SINE MIR -12 250 4 183 80 0 0 chr5 176775656 176775681 -22854469 + (TTTC)n Simple_repeat Simple_repeat 1 25 0 263 257 69 40 chr5 176778196 176778297 -22851853 + L2 LINE L2 3206 3309 -4 21 0 0 0 chr5 176778537 176778558 -22851592 + AT_rich Low_complexity Low_complexity 1 21 0 2867 16 0 0 chr5 176779248 176779563 -22850587 - AluYb8 SINE Alu -3 315 1 239 309 26 113 chr5 176781370 176781600 -22848550 + L2 LINE L2 2968 3177 -95 328 333 75 0 chr5 176781730 176781850 -22848300 + MIR SINE MIR 17 145 -117 2316 67 10 13 chr5 176782109 176782409 -22847741 - AluY SINE Alu -12 299 1 319 219 101 34 chr5 176782490 176782609 -22847541 + MLT1L LTR MaLR 105 231 -384 6182 100 7 9 chr5 176782612 176783877 -22846273 + L1PA13 LINE L1 4501 5763 -400 2515 57 0 3 chr5 176783877 176784175 -22845975 - AluY SINE Alu -14 297 1 6182 100 7 9 chr5 176784175 176784571 -22845579 + L1PA13 LINE L1 5763 6158 -5 309 151 0 0 chr5 176784891 176784944 -22845206 + (CA)n Simple_repeat Simple_repeat 2 54 0 2501 54 7 0 chr5 176785009 176785304 -22844846 - AluY SINE Alu -14 297 1 248 350 43 26 chr5 176785431 176785548 -22844602 - MIR SINE MIR -58 150 32 402 242 32 21 chr5 176785668 176785763 -22844387 + MIR SINE MIR 55 150 -58 549 258 159 7 chr5 176785942 176786093 -22844057 + MER5A DNA MER1_type 14 187 -2 214 306 20 31 chr5 176786093 176786150 -22844000 + MIR3 SINE MIR 152 207 -1 234 0 0 0 chr5 176786264 176786290 -22843860 + (TG)n Simple_repeat Simple_repeat 1 26 0 449 214 51 20 chr5 176786792 176786890 -22843260 + MIR SINE MIR 47 147 -61 209 380 127 0 chr5 176786936 176787078 -22843072 - MER5A DNA MER1_type -9 180 21 397 291 122 17 chr5 176787398 176787570 -22842580 + MIR3 SINE MIR 17 206 -2 285 352 97 5 chr5 176787922 176788112 -22842038 - MIR SINE MIR -34 228 24 22 70 0 0 chr5 176788829 176788872 -22841278 + AT_rich Low_complexity Low_complexity 1 43 0 182 118 29 0 chr5 176788912 176788946 -22841204 + CT-rich Low_complexity Low_complexity 2 36 0 300 137 0 0 chr5 176788951 176789002 -22841148 + (TTCC)n Simple_repeat Simple_repeat 3 53 0 186 86 171 0 chr5 176789700 176789735 -22840415 + MIR SINE MIR 124 164 -98 799 166 101 0 chr5 176789911 176790080 -22840070 - L1MA4 LINE L1 -5 6295 6110 243 198 12 23 chr5 176790744 176790830 -22839320 + CT-rich Low_complexity Low_complexity 3 87 0 1963 134 0 14 chr5 176790856 176791146 -22839004 - AluSx SINE Alu -13 299 14 418 241 0 11 chr5 176791449 176791572 -22838578 + L1MA4A LINE L1 6032 6279 -2 22 35 0 0 chr5 176791974 176792003 -22838147 + AT_rich Low_complexity Low_complexity 1 29 0 234 269 70 19 chr5 176792006 176792162 -22837988 + L1ME4a LINE L1 5274 5437 -2605 21 36 0 0 chr5 176792455 176792483 -22837667 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 176793374 176793395 -22836755 + AT_rich Low_complexity Low_complexity 1 21 0 564 290 90 88 chr5 176793524 176794624 -22835526 - L1M4 LINE L1 -2157 3989 2888 505 292 74 30 chr5 176794685 176795021 -22835129 - L1M4 LINE L1 -3623 2523 2173 245 371 74 17 chr5 176795232 176795407 -22834743 - MER5A DNA MER1_type -4 185 1 366 298 79 54 chr5 176795626 176796032 -22834118 - HAL1b LINE L1 -567 781 366 28 29 0 0 chr5 176796133 176796168 -22833982 + AT_rich Low_complexity Low_complexity 1 35 0 245 341 156 0 chr5 176796449 176796616 -22833534 + MIR SINE MIR 66 258 -4 1654 184 7 0 chr5 176796632 176796914 -22833236 - AluJb SINE Alu -26 286 3 22 94 0 0 chr5 176797328 176797392 -22832758 + AT_rich Low_complexity Low_complexity 1 64 0 2064 102 14 7 chr5 176797408 176797703 -22832447 - AluSx SINE Alu -15 297 1 201 239 0 22 chr5 176798155 176798201 -22831949 + (TG)n Simple_repeat Simple_repeat 2 46 0 374 293 62 56 chr5 176798208 176798512 -22831638 + L1ME4a LINE L1 5520 5825 -296 470 345 63 9 chr5 176798778 176799001 -22831149 - MIR SINE MIR 0 262 28 272 101 94 0 chr5 176800333 176800471 -22829679 + (CA)n Simple_repeat Simple_repeat 2 152 0 23 88 0 0 chr5 176801111 176801145 -22829005 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr5 176804299 176804328 -22825822 + AT_rich Low_complexity Low_complexity 1 29 0 429 391 13 17 chr5 176805597 176805832 -22824318 + L3 LINE CR1 510 743 -834 387 0 0 0 chr5 176806307 176806350 -22823800 + (CA)n Simple_repeat Simple_repeat 2 44 0 216 184 0 0 chr5 176806635 176806684 -22823466 + T-rich Low_complexity Low_complexity 1 49 0 188 286 65 39 chr5 176806744 176806821 -22823329 + MIR3 SINE MIR 76 154 -54 761 201 0 18 chr5 176808002 176808166 -22821984 + MER3 DNA MER1_type 7 167 -42 201 195 24 49 chr5 176808169 176808251 -22821899 + (CATATA)n Simple_repeat Simple_repeat 5 84 0 352 266 83 47 chr5 176808302 176808494 -22821656 + L1ME4a LINE L1 5712 5910 -211 889 219 5 5 chr5 176808798 176808985 -22821165 + MER5A DNA MER1_type 1 187 -2 429 223 223 22 chr5 176809000 176809139 -22821011 - MER5B DNA MER1_type -6 172 6 548 273 149 72 chr5 176809727 176809882 -22820268 - LTR67 LTR ERVL -165 392 250 1686 91 0 13 chr5 176809882 176810152 -22819998 - AluSc SINE Alu 0 309 68 548 273 149 72 chr5 176810152 176810359 -22819791 - LTR67 LTR ERVL -307 250 2 263 337 79 11 chr5 176810449 176810538 -22819612 + MIR SINE MIR 1 95 -167 288 292 21 10 chr5 176810548 176810644 -22819506 + LTR67 LTR ERVL 102 198 -359 510 309 26 21 chr5 176810965 176811156 -22818994 + MIR SINE MIR 71 262 0 22 0 0 0 chr5 176812299 176812321 -22817829 + AT_rich Low_complexity Low_complexity 1 22 0 517 329 83 12 chr5 176812321 176812561 -22817589 - MIR SINE MIR -2 260 4 675 261 0 12 chr5 176812699 176812864 -22817286 - MER20 DNA MER1_type -56 163 1 219 69 0 0 chr5 176813198 176813227 -22816923 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 707 227 11 11 chr5 176813959 176814135 -22816015 + MER5B DNA MER1_type 3 178 0 599 246 92 46 chr5 176814232 176814516 -22815634 - MER113 DNA MER1_type? -53 468 172 220 358 18 28 chr5 176814679 176814788 -22815362 + MIR SINE MIR 39 146 -62 568 123 28 9 chr5 176815860 176815966 -22814184 + AluY SINE Alu 1 108 -203 1906 268 86 19 chr5 176816363 176817412 -22812738 - L1M4 LINE L1 -2742 3404 2286 351 254 28 0 chr5 176817557 176817628 -22812522 + MER58 DNA MER1_type 6 78 -263 28 0 0 0 chr5 176817885 176817913 -22812237 + AT_rich Low_complexity Low_complexity 1 28 0 215 339 231 4 chr5 176817925 176818185 -22811965 - L3 LINE CR1 -771 806 488 775 251 112 9 chr5 176818253 176818476 -22811674 - MIR SINE MIR -3 259 14 546 219 102 0 chr5 176818861 176818989 -22811161 + MER45A DNA AcHobo 38 178 0 1644 173 25 74 chr5 176820284 176820717 -22809433 - L1MD3 LINE L1 -8 7987 7576 236 268 37 24 chr5 176821027 176821109 -22809041 - MIR SINE MIR -106 156 74 231 211 18 18 chr5 176821332 176821389 -22808761 + CT-rich Low_complexity Low_complexity 2 58 0 269 68 23 0 chr5 176821389 176821433 -22808717 + (CA)n Simple_repeat Simple_repeat 2 46 0 711 47 0 19 chr5 176821906 176822012 -22808138 + AluYa5/8 SINE Alu 204 307 -4 268 289 11 22 chr5 176822447 176822537 -22807613 - MIR SINE MIR -169 93 5 270 322 169 0 chr5 176823048 176823166 -22806984 - L2 LINE L2 -1 3271 3134 729 286 195 18 chr5 176823281 176823868 -22806282 + L2 LINE L2 2636 3313 0 277 342 75 0 chr5 176826723 176826843 -22803307 - MIR SINE MIR -30 232 104 304 188 83 52 chr5 176827323 176827419 -22802731 - L2 LINE L2 -1 3312 3214 1784 157 17 11 chr5 176828327 176828614 -22801536 + AluJo SINE Alu 1 289 -23 256 265 8 111 chr5 176829257 176829374 -22800776 - MER5B DNA MER1_type -72 106 2 184 243 0 54 chr5 176829423 176829497 -22800653 - MIR SINE MIR -13 249 180 190 291 36 0 chr5 176829950 176830005 -22800145 + L2 LINE L2 3256 3312 -1 268 260 91 0 chr5 176830101 176830178 -22799972 + L2 LINE L2 3229 3312 -1 304 275 72 58 chr5 176830258 176830396 -22799754 + MIR SINE MIR 97 236 -26 303 28 0 0 chr5 176831615 176831651 -22798499 + (TA)n Simple_repeat Simple_repeat 1 36 0 207 263 70 0 chr5 176832823 176832880 -22797270 - MIR SINE MIR -1 261 201 439 276 221 0 chr5 176833022 176833167 -22796983 - MER5A DNA MER1_type 0 189 13 4939 73 4 12 chr5 176833657 176834341 -22795809 + L1PA7 LINE L1 5476 6154 0 418 261 111 20 chr5 176836200 176836353 -22793797 - MIR SINE MIR -5 257 91 587 210 84 7 chr5 176836503 176836646 -22793504 + MLT1H LTR MaLR 59 212 -337 357 274 59 46 chr5 176836733 176836886 -22793264 + MLT1H LTR MaLR 387 541 -8 333 324 0 37 chr5 176837062 176837170 -22792980 + MIR SINE MIR 38 141 -67 1702 220 48 16 chr5 176837186 176837691 -22792459 - Charlie1b DNA MER1_type 0 523 3 30 59 0 0 chr5 176837724 176837775 -22792375 + AT_rich Low_complexity Low_complexity 1 51 0 28 48 0 0 chr5 176837871 176837913 -22792237 + AT_rich Low_complexity Low_complexity 1 42 0 1503 239 66 82 chr5 176838507 176839079 -22791071 + MLT1F1 LTR MaLR 1 563 -4 2516 183 51 0 chr5 176839082 176839630 -22790520 + L1MA8 LINE L1 3938 4513 -1633 2044 162 66 32 chr5 176839638 176840155 -22789995 + MLT2A2 LTR ERVL 3 540 -14 5832 180 26 35 chr5 176840161 176842009 -22788141 + L1MA8 LINE L1 4517 6285 -6 198 250 91 45 chr5 176842148 176842236 -22787914 + MIR SINE MIR 133 224 -38 22 0 0 0 chr5 176842287 176842309 -22787841 + AT_rich Low_complexity Low_complexity 1 22 0 312 320 170 13 chr5 176843275 176843428 -22786722 - MER5A DNA MER1_type 0 189 13 554 270 124 67 chr5 176843643 176843973 -22786177 + L2 LINE L2 2505 2853 -461 337 152 30 0 chr5 176843999 176844065 -22786085 + MADE1 DNA Mariner 13 80 0 618 308 94 35 chr5 176844068 176844441 -22785709 + L2 LINE L2 2846 3240 -73 180 109 76 22 chr5 176844445 176844537 -22785613 + (TA)n Simple_repeat Simple_repeat 2 98 0 238 183 32 32 chr5 176844576 176844669 -22785481 + (CATATA)n Simple_repeat Simple_repeat 3 95 0 454 231 0 136 chr5 176846073 176846272 -22783878 - L2 LINE L2 -8 3305 3134 432 286 118 42 chr5 176846514 176846752 -22783398 + HAL1 LINE L1 842 1097 -1410 22 35 0 0 chr5 176846760 176846789 -22783361 + AT_rich Low_complexity Low_complexity 1 29 0 207 171 0 0 chr5 176847476 176847511 -22782639 + (CA)n Simple_repeat Simple_repeat 1 35 0 532 281 174 82 chr5 176847882 176848331 -22781819 - L3 LINE CR1 -34 1543 1054 190 306 20 0 chr5 176848445 176848494 -22781656 - MIR SINE MIR -66 142 93 21 36 0 0 chr5 176849502 176849530 -22780620 + AT_rich Low_complexity Low_complexity 1 28 0 325 324 75 29 chr5 176849542 176849715 -22780435 - MIR SINE MIR -13 249 69 988 171 32 93 chr5 176851104 176851350 -22778800 + MER46A DNA MER2_type 5 235 -1 296 359 0 9 chr5 176851379 176851485 -22778665 + L2 LINE L2 3209 3313 0 212 236 0 37 chr5 176851662 176851824 -22778326 + GA-rich Low_complexity Low_complexity 1 156 0 336 284 57 35 chr5 176852199 176852340 -22777810 + MIR SINE MIR 65 208 -54 183 211 35 35 chr5 176852462 176852519 -22777631 + MIR SINE MIR 156 212 -50 309 26 0 0 chr5 176853379 176853417 -22776733 + (CA)n Simple_repeat Simple_repeat 1 38 0 181 250 0 58 chr5 176855026 176855078 -22775072 - L2 LINE L2 -30 3283 3235 446 302 113 50 chr5 176855360 176855906 -22774244 + L2 LINE L2 2507 3161 -152 737 199 27 7 chr5 176855906 176856052 -22774098 - FRAM SINE Alu -14 152 4 446 302 113 50 chr5 176856052 176856133 -22774017 + L2 LINE L2 3161 3235 -78 22 0 0 0 chr5 176856161 176856183 -22773967 + AT_rich Low_complexity Low_complexity 1 22 0 5072 160 8 20 chr5 176856345 176856521 -22773629 + L1PB4 LINE L1 5172 5349 -807 1788 175 0 9 chr5 176856521 176856836 -22773314 + AluJb SINE Alu 1 312 0 5072 160 8 20 chr5 176856836 176857648 -22772502 + L1PB4 LINE L1 5349 6154 -2 322 311 68 11 chr5 176858052 176858242 -22771908 + LTR33 LTR ERVL 3 203 -318 216 333 14 0 chr5 176858833 176858902 -22771248 + L2 LINE L2 3207 3276 -37 43 35 0 0 chr5 176858914 176858971 -22771179 + AT_rich Low_complexity Low_complexity 1 57 0 2131 124 3 9 chr5 176859793 176860108 -22770042 - AluSq SINE Alu 0 313 1 1327 210 0 34 chr5 176860150 176860445 -22769705 - AluJb SINE Alu -27 285 1 216 0 0 0 chr5 176861659 176861683 -22768467 + (CA)n Simple_repeat Simple_repeat 1 24 0 214 306 20 31 chr5 176861797 176861854 -22768296 - MIR3 SINE MIR -1 207 152 549 258 159 7 chr5 176861854 176862005 -22768145 - MER5A DNA MER1_type -2 187 14 402 242 32 21 chr5 176862183 176862278 -22767872 - MIR SINE MIR -58 150 55 248 350 43 26 chr5 176862398 176862515 -22767635 + MIR SINE MIR 32 150 -58 2505 57 7 0 chr5 176862642 176862943 -22767207 + AluY SINE Alu 1 303 -8 24 32 0 0 chr5 176863131 176863162 -22766988 + AT_rich Low_complexity Low_complexity 1 31 0 790 247 101 18 chr5 176863487 176863714 -22766436 - MIR SINE MIR -2 260 15 1218 192 21 11 chr5 176864674 176864955 -22765195 + L1 LINE L1 4949 5232 -914 31 48 0 16 chr5 176865095 176865118 -22765032 + AT_rich Low_complexity Low_complexity 1 23 -39 1166 134 138 60 chr5 176865118 176865386 -22764764 + AluJb SINE Alu 1 289 -13 31 48 0 16 chr5 176865386 176865425 -22764725 + AT_rich Low_complexity Low_complexity 23 62 0 450 0 0 0 chr5 176865945 176865995 -22764155 + (CA)n Simple_repeat Simple_repeat 2 51 0 309 289 24 0 chr5 176865998 176866081 -22764069 - MIR SINE MIR -1 261 177 329 399 0 0 chr5 176866183 176866321 -22763829 + L2 LINE L2 3166 3303 -10 195 204 0 41 chr5 176867373 176867422 -22762728 + L2 LINE L2 3226 3272 0 772 176 0 0 chr5 176867892 176868017 -22762133 + AluSg/x SINE Alu 136 260 -50 197 222 16 0 chr5 176868017 176868080 -22762070 + (TA)n Simple_repeat Simple_repeat 1 64 0 377 219 70 59 chr5 176868164 176868236 -22761914 + L1MC5 LINE L1 7738 7808 -153 795 202 74 49 chr5 176868236 176868439 -22761711 + MER3 DNA MER1_type 2 209 0 377 219 70 59 chr5 176868439 176868553 -22761597 + L1MC5 LINE L1 7808 7926 -35 956 188 16 0 chr5 176868573 176868759 -22761391 + L1MA9 LINE L1 5894 6082 -230 527 191 0 0 chr5 176868761 176868871 -22761279 + L1MA9 LINE L1 6181 6290 -22 380 339 90 21 chr5 176869991 176870224 -22759926 - MIR SINE MIR -11 251 3 568 299 104 14 chr5 176870626 176870837 -22759313 - MIR SINE MIR -12 250 21 289 315 0 33 chr5 176871783 176871875 -22758275 + MER5A DNA MER1_type 42 130 -59 400 267 121 24 chr5 176873634 176873799 -22756351 - MIR SINE MIR -9 253 73 205 241 62 0 chr5 176873962 176874074 -22756076 + (TA)n Simple_repeat Simple_repeat 2 120 0 229 191 0 0 chr5 176876077 176876124 -22754026 + (CAT)n Simple_repeat Simple_repeat 2 48 0 384 313 148 13 chr5 176876128 176876358 -22753792 - MIR SINE MIR -1 261 1 466 343 37 5 chr5 176876415 176876631 -22753519 - MER102a DNA MER1_type -1 329 107 190 268 0 0 chr5 176876739 176876780 -22753370 - L2 LINE L2 -2 3311 3271 189 250 0 69 chr5 176876756 176876828 -22753322 - L2 LINE L2 -217 3055 2989 * 681 337 62 35 chr5 176877038 176877412 -22752738 - L2 LINE L2 0 3313 2930 659 276 169 30 chr5 176877418 176877755 -22752395 - L2 LINE L2 -678 2636 2253 2117 105 3 3 chr5 176877755 176878079 -22752071 + AluSp SINE Alu 1 324 0 483 298 128 43 chr5 176879120 176879355 -22750795 + MIR SINE MIR 8 262 0 451 233 74 107 chr5 176879617 176879888 -22750262 - Charlie8 DNA MER1_type -2131 286 25 1796 164 0 26 chr5 176879976 176880281 -22749869 + AluJb SINE Alu 4 300 -12 354 98 0 0 chr5 176882447 176882498 -22747652 + (TC)n Simple_repeat Simple_repeat 2 52 0 225 300 132 53 chr5 176883319 176883509 -22746641 + L2 LINE L2 2431 2635 -679 275 274 288 0 chr5 176883524 176883670 -22746480 - MER102a DNA MER1_type -19 311 124 306 0 0 0 chr5 176884048 176884082 -22746068 + (TG)n Simple_repeat Simple_repeat 2 35 0 309 208 19 104 chr5 176884782 176884888 -22745262 - MIR SINE MIR 0 262 166 2008 119 0 7 chr5 176885229 176885535 -22744615 - AluSx SINE Alu 0 304 1 346 331 39 16 chr5 176886482 176886609 -22743541 + MIR SINE MIR 59 188 -74 327 140 11 54 chr5 176886948 176887041 -22743109 + L1MA5A LINE L1 6196 6284 -13 30 27 0 0 chr5 176887665 176887702 -22742448 + AT_rich Low_complexity Low_complexity 1 37 0 343 261 54 0 chr5 176888049 176888141 -22742009 - L2 LINE L2 0 3313 3217 1206 123 0 0 chr5 176888785 176888956 -22741194 - AluJo SINE Alu -13 299 129 7124 53 9 0 chr5 176888969 176890046 -22740104 - L1PA7 LINE L1 -6 6148 5070 4225 98 2 3 chr5 176890046 176890659 -22739491 + L1PA7 LINE L1 4473 5084 -1062 497 222 0 0 chr5 176890660 176890759 -22739391 - AluJo SINE Alu -176 136 38 588 226 102 96 chr5 176890921 176891461 -22738689 - L1MC5 LINE L1 -30 7931 7389 548 200 0 17 chr5 176891468 176891583 -22738567 - FRAM SINE Alu -4 172 60 1133 227 93 94 chr5 176891777 176892381 -22737769 - L1MC5 LINE L1 -722 7239 6637 1987 119 0 10 chr5 176892413 176892706 -22737444 - AluSc SINE Alu -19 290 1 243 0 0 0 chr5 176893039 176893066 -22737084 + (TG)n Simple_repeat Simple_repeat 2 28 0 1365 233 124 16 chr5 176893574 176894017 -22736133 + L2 LINE L2 1202 1692 -1622 247 239 136 0 chr5 176944054 176944142 -22686008 + L1ME4a LINE L1 5995 6094 -27 228 217 89 178 chr5 176945239 176945396 -22684754 + MIR SINE MIR 50 192 -70 23 33 0 0 chr5 176947643 176947673 -22682477 + AT_rich Low_complexity Low_complexity 1 30 0 465 308 33 33 chr5 176947673 176947887 -22682263 + MIR SINE MIR 49 262 0 254 180 16 0 chr5 176948000 176948061 -22682089 + (TATATG)n Simple_repeat Simple_repeat 4 65 0 267 256 77 43 chr5 176948227 176948344 -22681806 + MER5A DNA MER1_type 69 189 0 22 35 0 0 chr5 176949063 176949092 -22681058 + AT_rich Low_complexity Low_complexity 1 29 0 989 222 28 0 chr5 176949926 176950138 -22680012 + MER20 DNA MER1_type 2 219 0 23 33 0 0 chr5 176951124 176951154 -22678996 + AT_rich Low_complexity Low_complexity 1 30 0 539 230 112 6 chr5 176951365 176951526 -22678624 + MIR SINE MIR 69 246 -16 1734 174 53 53 chr5 176951534 176951966 -22678184 + MSTB1 LTR MaLR 1 432 0 212 214 14 57 chr5 176952038 176952108 -22678042 + GA-rich Low_complexity Low_complexity 6 72 0 2184 87 0 4 chr5 176952410 176952685 -22677465 - AluSx SINE Alu -36 276 3 518 349 88 45 chr5 176952705 176953298 -22676852 + L2 LINE L2 1801 2418 -896 1865 162 10 10 chr5 176954331 176954628 -22675522 + AluJb SINE Alu 3 299 -13 427 304 26 0 chr5 176954636 176954751 -22675399 + L2 LINE L2 3150 3267 -5 13599 130 33 29 chr5 176955498 176956628 -22673522 - Tigger1 DNA MER2_type -1 2417 1293 1761 178 4 0 chr5 176956628 176956933 -22673217 - AluJb SINE Alu 0 308 3 13599 130 33 29 chr5 176956933 176958207 -22671943 - Tigger1 DNA MER2_type -1125 1293 2 21 36 0 0 chr5 176961217 176961245 -22668905 + AT_rich Low_complexity Low_complexity 1 28 0 212 184 0 0 chr5 176962592 176962630 -22667520 + A-rich Low_complexity Low_complexity 1 38 0 212 308 0 0 chr5 176962984 176963062 -22667088 + G-rich Low_complexity Low_complexity 1 78 0 464 297 176 9 chr5 176964324 176964546 -22665604 - MIR SINE MIR 0 262 4 201 74 0 0 chr5 176965119 176965146 -22665004 + (CA)n Simple_repeat Simple_repeat 1 27 0 213 39 0 0 chr5 176965593 176965619 -22664531 + (TAA)n Simple_repeat Simple_repeat 3 28 0 478 322 59 29 chr5 176965728 176965967 -22664183 + MIR SINE MIR 4 249 -13 8415 102 5 2 chr5 176966056 176968063 -22662087 - L1PA7 LINE L1 -8 6146 4142 2145 104 3 10 chr5 176968265 176968563 -22661587 + AluSc SINE Alu 1 296 -13 6103 34 0 1 chr5 176968930 176969661 -22660489 - L1PA4 LINE L1 -3 6152 5423 804 307 149 3 chr5 176970102 176970470 -22659680 - L2 LINE L2 -647 2667 2246 254 315 91 47 chr5 176970475 176970707 -22659443 + L2 LINE L2 3072 3313 0 242 302 58 12 chr5 176970858 176970944 -22659206 - L2 LINE L2 -1258 2056 1967 23 0 0 0 chr5 176971583 176971606 -22658544 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr5 176971883 176971910 -22658240 + AT_rich Low_complexity Low_complexity 1 27 0 361 286 136 25 chr5 176971921 176972096 -22658054 - MIR SINE MIR -41 221 39 32 43 0 0 chr5 176972857 176972903 -22657247 + AT_rich Low_complexity Low_complexity 1 46 0 357 321 204 29 chr5 176973380 176973866 -22656284 - MLT1K LTR MaLR -16 572 2 1762 162 38 38 chr5 176974405 176974776 -22655374 + THE1C LTR MaLR 1 371 -4 23 68 0 0 chr5 176974856 176974900 -22655250 + AT_rich Low_complexity Low_complexity 1 44 0 2368 92 0 22 chr5 176974928 176975245 -22654905 + AluSg SINE Alu 1 310 0 196 211 118 0 chr5 176975284 176975360 -22654790 - MIR SINE MIR -44 218 134 32 43 0 0 chr5 176977297 176977343 -22652807 + AT_rich Low_complexity Low_complexity 1 46 0 360 311 0 10 chr5 176977991 176978094 -22652056 + MIR3 SINE MIR 97 198 -10 557 204 58 7 chr5 176978100 176978237 -22651913 + MER58A DNA MER1_type 1 144 0 659 226 28 51 chr5 176978251 176978428 -22651722 - MIR SINE MIR -88 174 2 2336 112 3 0 chr5 176979186 176979498 -22650652 - AluSq SINE Alu 0 313 1 259 274 0 0 chr5 176979716 176979789 -22650361 + CT-rich Low_complexity Low_complexity 2 74 0 351 238 159 33 chr5 176979823 176979974 -22650176 - MIR SINE MIR -19 243 74 222 152 0 22 chr5 176981300 176981346 -22648804 + A-rich Low_complexity Low_complexity 3 47 0 1751 156 0 33 chr5 176981561 176981837 -22648313 - AluJb SINE Alu -45 267 1 483 304 207 15 chr5 176981969 176982298 -22647852 + L2 LINE L2 2816 3207 -106 1727 152 73 22 chr5 176982321 176982677 -22647473 + THE1C LTR MaLR 2 375 0 287 321 76 114 chr5 176983167 176983588 -22646562 - L2 LINE L2 -8 3264 2860 261 320 57 41 chr5 176984027 176984149 -22646001 + MIR SINE MIR 27 150 -112 399 245 10 10 chr5 176984379 176984481 -22645669 - MER5B DNA MER1_type -76 102 1 225 375 49 31 chr5 176984964 176985188 -22644962 + L2 LINE L2 2685 2912 -402 372 267 161 31 chr5 176985211 176985372 -22644778 - MER5A DNA MER1_type 0 189 8 288 0 0 0 chr5 176987421 176987453 -22642697 + (TA)n Simple_repeat Simple_repeat 2 33 0 457 356 102 28 chr5 176988229 176988583 -22641567 + L2 LINE L2 2934 3313 0 385 277 132 23 chr5 176988743 176989009 -22641141 - LTR16A1 LTR ERVL -1 456 156 206 368 0 0 chr5 176989262 176989330 -22640820 - MIR3 SINE MIR -49 159 92 740 363 58 31 chr5 176989708 176990223 -22639927 - L2 LINE L2 -5 3308 2770 2233 262 32 9 chr5 176990287 176990387 -22639763 + L1ME2 LINE L1 4356 4452 -1694 288 0 0 0 chr5 176990387 176990419 -22639731 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2233 262 32 9 chr5 176990419 176991126 -22639024 + L1ME2 LINE L1 4452 5182 -964 3667 197 61 41 chr5 176991135 176992156 -22637994 + L1MC3 LINE L1 6721 7761 -24 1321 241 35 23 chr5 176992183 176992618 -22637532 + L1ME2 LINE L1 5715 6154 -10 499 325 30 5 chr5 176992635 176992832 -22637318 - L2 LINE L2 -609 2705 2504 215 397 22 15 chr5 176992864 176993000 -22637150 + MIR3 SINE MIR 19 155 -53 366 23 0 0 chr5 176993682 176993725 -22636425 + (CA)n Simple_repeat Simple_repeat 1 43 0 192 274 0 0 chr5 176994331 176994382 -22635768 - L2 LINE L2 -1 3312 3262 2170 135 35 22 chr5 176995061 176995431 -22634719 - THE1C LTR MaLR 0 375 1 220 231 0 0 chr5 176995933 176995972 -22634178 + L2 LINE L2 3252 3290 -23 212 231 0 0 chr5 176995942 176995981 -22634169 + MIR SINE MIR 216 254 -8 * 306 156 0 0 chr5 176996698 176996762 -22633388 + A-rich Low_complexity Low_complexity 1 64 0 734 147 140 0 chr5 176997103 176997246 -22632904 - FAM SINE Alu -11 164 2 316 281 95 45 chr5 176998257 176998341 -22631809 - MIR SINE MIR -1 261 183 867 268 87 48 chr5 176998341 176998733 -22631417 + MLT1I LTR MaLR 1 407 -2 316 281 95 45 chr5 176998733 176998890 -22631260 - MIR SINE MIR -79 183 8 398 216 30 123 chr5 176999055 176999252 -22630898 - MIR SINE MIR -50 212 34 1535 208 27 3 chr5 176999566 176999864 -22630286 + AluJb SINE Alu 3 307 -5 340 244 6 6 chr5 177000937 177001113 -22629037 + (TA)n Simple_repeat Simple_repeat 1 176 0 347 281 44 31 chr5 177001396 177001556 -22628594 - MIR SINE MIR -67 195 34 186 43 0 0 chr5 177001580 177001603 -22628547 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 635 287 82 25 chr5 177001781 177002220 -22627930 + L1ME2 LINE L1 301 764 -5306 586 189 0 0 chr5 177002258 177002353 -22627797 + AluJb SINE Alu 173 267 -45 690 281 73 51 chr5 177002354 177002946 -22627204 + L1ME2 LINE L1 823 1433 -4647 2246 109 7 0 chr5 177002946 177003249 -22626901 + AluSx SINE Alu 1 305 -7 690 281 73 51 chr5 177003249 177003492 -22626658 + L1ME2 LINE L1 1433 1669 -4411 * 3314 160 34 39 chr5 177003448 177004380 -22625770 - L1PA16 LINE L1 -248 5918 4992 18726 48 3 0 chr5 177004382 177007516 -22622634 - L1PA5 LINE L1 0 6154 3015 2853 223 38 33 chr5 177007896 177008633 -22621517 - L1ME2 LINE L1 -32 6132 5392 9211 235 24 9 chr5 177008739 177010795 -22619355 - L1 LINE L1 -1193 4953 2852 193 29 29 29 chr5 177010795 177010830 -22619320 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 9211 235 24 9 chr5 177010830 177011245 -22618905 - L1 LINE L1 -3294 2852 2445 692 208 19 0 chr5 177011493 177011647 -22618503 - L1 LINE L1 -3683 2463 2307 1183 244 34 3 chr5 177011650 177011974 -22618176 + L1ME2 LINE L1 2321 2654 -3426 285 171 122 0 chr5 177011994 177012076 -22618074 + L1ME2 LINE L1 2715 2806 -3274 2970 227 62 28 chr5 177012078 177012105 -22618045 + L1ME2 LINE L1 5112 5137 -961 1948 126 3 50 chr5 177012105 177012423 -22617727 + AluSx SINE Alu 1 303 -9 2970 227 62 28 chr5 177012423 177013317 -22616833 + L1ME2 LINE L1 5137 6066 -32 18761 48 3 0 chr5 177013697 177016825 -22613325 + L1PA5 LINE L1 3015 6153 -1 2364 221 81 51 chr5 177017028 177017334 -22612816 + L1MA9 LINE L1 5463 5758 -554 291 28 0 0 chr5 177017334 177017370 -22612780 + (CA)n Simple_repeat Simple_repeat 2 37 0 330 26 0 0 chr5 177017371 177017410 -22612740 + (TA)n Simple_repeat Simple_repeat 2 40 0 2364 221 81 51 chr5 177017410 177017889 -22612261 + L1MA9 LINE L1 5757 6274 -38 1913 219 52 7 chr5 177018810 177019248 -22610902 + MLT1C LTR MaLR 1 458 -9 1622 177 3 23 chr5 177019688 177019987 -22610163 - AluJo SINE Alu -19 293 1 24 32 0 0 chr5 177020140 177020171 -22609979 + AT_rich Low_complexity Low_complexity 1 31 0 277 309 0 0 chr5 177020340 177020408 -22609742 - MLT1K LTR MaLR -325 263 196 271 333 65 0 chr5 177020601 177020694 -22609456 - L2 LINE L2 -35 3237 3139 533 311 61 4 chr5 177021387 177021615 -22608535 + MIR SINE MIR 11 251 -11 31 0 0 0 chr5 177021916 177021947 -22608203 + AT_rich Low_complexity Low_complexity 1 31 0 1276 219 62 7 chr5 177022815 177023089 -22607061 - AluJo SINE Alu -21 291 3 24 53 0 0 chr5 177023468 177023506 -22606644 + AT_rich Low_complexity Low_complexity 1 38 0 230 319 80 22 chr5 177024628 177024854 -22605296 + L2 LINE L2 3009 3247 -66 360 103 0 0 chr5 177024982 177025040 -22605110 + (CA)n Simple_repeat Simple_repeat 2 59 0 42723 35 21 1 chr5 177025177 177031211 -22598939 - L1PA2 LINE L1 0 6155 1 21 0 0 0 chr5 177031319 177031340 -22598810 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr5 177031396 177031426 -22598724 + AT_rich Low_complexity Low_complexity 1 30 0 365 261 56 14 chr5 177031962 177032104 -22598046 - MER103 DNA DNA -9 157 10 254 177 0 0 chr5 177032315 177032364 -22597786 + MIR SINE MIR 71 120 -88 282 197 92 26 chr5 177033065 177033141 -22597009 + MIR SINE MIR 47 127 -81 416 291 153 20 chr5 177033652 177033848 -22596302 + MIR SINE MIR 30 251 -11 355 293 58 16 chr5 177034379 177034718 -22595432 + L1ME2 LINE L1 1331 1633 -5226 1179 254 63 47 chr5 177034807 177035363 -22594787 + LTR24B LTR ERV1 5 569 -7 653 295 92 72 chr5 177035373 177035460 -22594690 + L1ME2 LINE L1 1868 1952 -5186 772 160 25 0 chr5 177035460 177035579 -22594571 + FLAM_C SINE Alu 1 122 -11 653 295 92 72 chr5 177035579 177036033 -22594117 + L1ME2 LINE L1 1952 2420 -4718 713 294 93 7 chr5 177036209 177036648 -22593502 + L1ME2 LINE L1 2787 3263 -3875 694 276 84 27 chr5 177036656 177037008 -22593142 + L1ME2 LINE L1 3369 3762 -3195 1718 181 23 0 chr5 177037008 177037120 -22593030 + AluJo SINE Alu 3 111 -201 456 35 0 0 chr5 177037120 177037178 -22592972 + (CA)n Simple_repeat Simple_repeat 1 58 0 1718 181 23 0 chr5 177037178 177037368 -22592782 + AluJo SINE Alu 111 312 0 694 276 84 27 chr5 177037368 177037536 -22592614 + L1ME2 LINE L1 3762 3919 -3038 3835 173 38 36 chr5 177037564 177038382 -22591768 + L1MA6 LINE L1 4764 5588 -712 2091 119 3 16 chr5 177038382 177038694 -22591456 + AluSx SINE Alu 1 308 -4 3835 173 38 36 chr5 177038694 177039240 -22590910 + L1MA6 LINE L1 5588 6131 -169 1487 257 152 20 chr5 177039254 177040314 -22589836 + L1ME2 LINE L1 3974 5173 -1784 1992 178 50 33 chr5 177040317 177040854 -22589296 - MLT2A2 LTR ERVL -8 546 1 1223 259 92 45 chr5 177040854 177041235 -22588915 + L1ME2 LINE L1 5168 5530 -1427 2217 103 6 13 chr5 177041235 177041547 -22588603 + AluSg SINE Alu 1 310 0 1223 259 92 45 chr5 177041547 177041807 -22588343 + L1ME2 LINE L1 5530 5776 -1181 2406 68 7 0 chr5 177041807 177042103 -22588047 - AluY SINE Alu -13 298 1 1223 259 92 45 chr5 177042103 177042256 -22587894 + L1ME2 LINE L1 5776 5920 -1037 199 0 65 0 chr5 177042256 177042287 -22587863 + (TA)n Simple_repeat Simple_repeat 2 34 0 1223 259 92 45 chr5 177042287 177042399 -22587751 + L1ME2 LINE L1 5920 6119 -838 823 155 16 70 chr5 177042404 177042591 -22587559 + AluJb SINE Alu 129 305 -7 1886 234 116 73 chr5 177042615 177042789 -22587361 + L1ME2 LINE L1 6137 6302 -673 1879 82 8 0 chr5 177042789 177043045 -22587105 + L1PA7 LINE L1 5890 6147 -7 1886 234 116 73 chr5 177043045 177043666 -22586484 + L1ME2 LINE L1 6302 6966 -9 22 35 0 0 chr5 177044097 177044126 -22586024 + AT_rich Low_complexity Low_complexity 1 29 0 276 300 40 10 chr5 177044357 177044457 -22585693 + MER117 DNA MER1_type 45 147 -50 237 323 73 10 chr5 177044576 177044672 -22585478 + L2 LINE L2 3171 3272 0 243 250 0 50 chr5 177046672 177046752 -22583398 + CT-rich Low_complexity Low_complexity 5 80 0 516 219 16 23 chr5 177047390 177047518 -22582632 - MER58B DNA MER1_type -20 321 195 582 265 54 25 chr5 177047784 177047988 -22582162 - MIR SINE MIR -2 260 51 630 281 91 27 chr5 177048689 177049103 -22581047 + MLT1C LTR MaLR 26 467 0 502 333 73 29 chr5 177049113 177049355 -22580795 + MLT1K LTR MaLR 62 323 -265 243 0 0 0 chr5 177049355 177049382 -22580768 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 502 333 73 29 chr5 177049382 177049454 -22580696 + MLT1K LTR MaLR 323 390 -198 3453 146 50 47 chr5 177049813 177050596 -22579554 - LTR1 LTR ERV1 0 785 1 1383 179 13 83 chr5 177050816 177051138 -22579012 - AluJb SINE Alu 0 301 1 225 0 0 0 chr5 177051356 177051381 -22578769 + (T)n Simple_repeat Simple_repeat 1 25 0 482 80 0 28 chr5 177051526 177051729 -22578421 + AluY SINE Alu 37 302 -9 2398 66 0 3 chr5 177052674 177052975 -22577175 + AluY SINE Alu 1 300 -11 189 214 24 0 chr5 177053150 177053192 -22576958 - L2 LINE L2 -12 3260 3218 2249 99 9 15 chr5 177059245 177059577 -22570573 + THE1C-int LTR MaLR 1251 1580 0 1907 135 86 9 chr5 177059577 177059925 -22570225 + THE1C LTR MaLR 1 375 0 477 315 112 4 chr5 177059931 177060182 -22569968 + L2 LINE L2 1723 2000 -1314 694 312 43 93 chr5 177060183 177060841 -22569309 + L2 LINE L2 2322 2946 -368 2050 175 37 3 chr5 177061184 177061561 -22568589 - MLT1B LTR MaLR 0 390 1 2209 116 0 3 chr5 177062266 177062577 -22567573 + AluSg SINE Alu 1 310 0 779 326 31 23 chr5 177063009 177063359 -22566791 + MLT1K LTR MaLR 231 583 -5 2021 114 0 0 chr5 177063499 177063779 -22566371 - AluSx SINE Alu -2 310 31 2761 215 22 14 chr5 177063895 177064738 -22565412 - L1MC3 LINE L1 -643 7211 6190 25 31 0 0 chr5 177064745 177064777 -22565373 + AT_rich Low_complexity Low_complexity 1 32 0 1991 145 42 22 chr5 177064779 177065057 -22565093 - L1PB1 LINE L1 0 6151 5862 2029 111 0 44 chr5 177065057 177065401 -22564749 + AluSp SINE Alu 1 331 0 1991 145 42 22 chr5 177065401 177065480 -22564670 - L1PB1 LINE L1 -289 5862 5786 236 130 0 0 chr5 177065489 177065535 -22564615 - LTR66 LTR ERVL -171 439 394 261 210 0 0 chr5 177065555 177065617 -22564533 + (TA)n Simple_repeat Simple_repeat 2 63 0 223 154 31 0 chr5 177065634 177065699 -22564451 + (TA)n Simple_repeat Simple_repeat 1 67 0 228 159 0 0 chr5 177065703 177065747 -22564403 + LTR66 LTR ERVL 394 437 -173 3364 130 6 0 chr5 177065747 177066360 -22563790 - L1PB1 LINE L1 -384 5767 5152 394 275 22 14 chr5 177066357 177066495 -22563655 - L1MC3 LINE L1 -1662 6192 6054 * 374 202 32 0 chr5 177066508 177066602 -22563548 - L1MC3 LINE L1 0 7785 7689 825 184 48 6 chr5 177066617 177066785 -22563365 - L1MC3 LINE L1 -312 7473 7299 533 178 0 20 chr5 177066793 177066894 -22563256 - L1MC3 LINE L1 -1799 6055 5957 5142 203 26 18 chr5 177066903 177067813 -22562337 - L1MC1 LINE L1 -23 6310 5383 1931 147 29 27 chr5 177067813 177068187 -22561963 + THE1C LTR MaLR 1 375 0 5142 203 26 18 chr5 177068187 177068578 -22561572 - L1MC1 LINE L1 -950 5383 4996 1879 259 113 51 chr5 177068586 177070747 -22559403 - L1MC3 LINE L1 -745 5470 3703 8480 59 10 2 chr5 177070752 177071814 -22558336 - MER11C LTR ERVK 0 1071 1 321 278 67 61 chr5 177072788 177073148 -22557002 - L1MC3 LINE L1 -4954 1442 1081 22 0 0 0 chr5 177073165 177073187 -22556963 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr5 177073227 177073264 -22556886 + AT_rich Low_complexity Low_complexity 1 37 0 9693 149 13 1 chr5 177073366 177075793 -22554357 + L1PA10 LINE L1 3709 6163 -5 24 32 0 0 chr5 177075794 177075825 -22554325 + AT_rich Low_complexity Low_complexity 1 31 0 7156 269 87 24 chr5 177075825 177077851 -22552299 + L1MB7 LINE L1 1042 2940 -3442 1649 95 28 0 chr5 177077851 177078104 -22552046 + L1MA4A LINE L1 6044 6303 0 7156 269 87 24 chr5 177078104 177079851 -22550299 + L1MB7 LINE L1 2940 5054 -1328 2598 162 34 6 chr5 177079870 177080338 -22549812 + MER52A LTR ERV1 1275 1755 0 242 218 127 55 chr5 177080338 177080448 -22549702 - Charlie7 DNA MER1_type 0 2612 2495 2137 225 44 22 chr5 177080506 177081492 -22548658 + L1MB7 LINE L1 5060 6057 -363 3230 212 53 3 chr5 177081503 177082221 -22547929 + L1MC3 LINE L1 7015 7768 -17 1399 206 29 42 chr5 177082220 177082598 -22547552 + L1MB7 LINE L1 6048 6420 0 * 201 124 90 22 chr5 177082707 177082796 -22547354 + (TTTAA)n Simple_repeat Simple_repeat 1 95 0 236 337 166 20 chr5 177084072 177084271 -22545879 - L2 LINE L2 -2506 808 581 267 352 11 0 chr5 177084330 177084418 -22545732 + MLT1I LTR MaLR 1 89 -320 386 331 76 0 chr5 177084487 177084659 -22545491 - MIR SINE MIR 0 262 78 1675 249 48 24 chr5 177084708 177085209 -22544941 + MLT2B1 LTR ERVL 8 520 0 24 0 0 0 chr5 177085390 177085414 -22544736 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 177085585 177085606 -22544544 + AT_rich Low_complexity Low_complexity 1 21 0 1003 88 15 0 chr5 177086330 177086467 -22543683 + L1PA10 LINE L1 6027 6165 -3 383 78 16 0 chr5 177086490 177086554 -22543596 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 183 271 0 0 chr5 177086898 177086957 -22543193 + (TA)n Simple_repeat Simple_repeat 2 60 0 3752 19 0 0 chr5 177087050 177087483 -22542667 + L1PA3 LINE L1 5720 6152 -3 21 82 0 0 chr5 177088734 177088783 -22541367 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr5 177089419 177089443 -22540707 + AT_rich Low_complexity Low_complexity 1 24 0 729 272 131 29 chr5 177089501 177089813 -22540337 - LTR16A LTR ERVL -10 440 97 1479 234 30 33 chr5 177090025 177090422 -22539728 - MSTD LTR MaLR 0 396 1 2521 57 0 0 chr5 177090550 177090849 -22539301 + AluY SINE Alu 1 299 -12 594 305 48 14 chr5 177090933 177091143 -22539007 - MIR SINE MIR -31 231 15 4950 95 15 7 chr5 177091404 177092128 -22538022 - L1PA13 LINE L1 -5 6158 5429 2123 254 105 13 chr5 177092158 177093002 -22537148 + L1ME1 LINE L1 5124 6036 -130 317 273 112 53 chr5 177093091 177093278 -22536872 + Charlie8 DNA MER1_type 88 285 -2132 261 133 20 23 chr5 177094448 177094505 -22535645 + MLT1J LTR MaLR 63 156 -332 279 140 0 0 chr5 177096078 177096128 -22534022 + (ATG)n Simple_repeat Simple_repeat 2 51 0 200 324 174 6 chr5 177096135 177096310 -22533840 - MIR SINE MIR -14 248 36 185 365 166 19 chr5 177096529 177096740 -22533410 + L2 LINE L2 2819 3060 -212 265 311 149 6 chr5 177097374 177097535 -22532615 + MIR SINE MIR 75 258 -4 2249 89 14 0 chr5 177097806 177098097 -22532053 + AluSc SINE Alu 1 295 -14 363 339 32 48 chr5 177098115 177098304 -22531846 - L3 LINE CR1 -106 1471 1286 * 424 336 109 9 chr5 177098281 177098492 -22531658 + MIR SINE MIR 31 262 0 202 297 94 0 chr5 177098634 177098698 -22531452 - MIR3 SINE MIR -42 166 97 225 350 52 9 chr5 177098860 177098969 -22531181 + MIR SINE MIR 37 154 -85 337 349 30 18 chr5 177100327 177100496 -22529654 + MER20B DNA MER1_type 6 176 -607 576 188 38 38 chr5 177101019 177101152 -22528998 - MER20 DNA MER1_type 0 219 87 191 295 189 11 chr5 177101940 177102035 -22528115 - MIR3 SINE MIR -22 186 75 5745 89 48 9 chr5 177102284 177103213 -22526937 + L1PA10 LINE L1 5201 6163 -5 212 358 108 20 chr5 177103342 177103490 -22526660 + L3 LINE CR1 806 966 -611 232 374 129 0 chr5 177103496 177103635 -22526515 + L3 LINE CR1 1121 1277 -300 250 59 103 0 chr5 177103891 177103959 -22526191 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 21 57 0 0 chr5 177103959 177103994 -22526156 + AT_rich Low_complexity Low_complexity 1 35 0 53 0 0 0 chr5 177104025 177104078 -22526072 + AT_rich Low_complexity Low_complexity 1 53 0 380 169 0 0 chr5 177205095 177205186 -22424964 + AluJ/FRAM SINE Alu 226 316 0 255 257 46 64 chr5 177205791 177205900 -22424250 - MIR3 SINE MIR -1 207 101 215 360 12 47 chr5 177206197 177206369 -22423781 - MIR SINE MIR -50 212 47 365 319 9 18 chr5 177207723 177207836 -22422314 - MIR SINE MIR -119 143 32 819 201 6 30 chr5 177208076 177208245 -22421905 + MER20 DNA MER1_type 54 218 -1 214 276 17 17 chr5 177208646 177208704 -22421446 - MER5A DNA MER1_type -93 96 39 206 342 153 0 chr5 177208725 177208836 -22421314 - MIR3 SINE MIR -41 167 40 26 82 0 0 chr5 177209699 177209760 -22420390 + AT_rich Low_complexity Low_complexity 1 61 0 567 275 104 14 chr5 177210267 177210478 -22419672 - MIR SINE MIR -32 230 1 205 274 20 0 chr5 177210590 177210641 -22419509 - L2 LINE L2 -5 3267 3216 319 0 65 0 chr5 177211046 177211092 -22419058 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 2222 73 3 3 chr5 177211099 177211431 -22418719 + AluY SINE Alu 1 332 0 248 296 70 35 chr5 177212040 177212155 -22417995 + MIR SINE MIR 30 148 -114 287 293 91 58 chr5 177212480 177212688 -22417462 - MIR SINE MIR -1 261 47 314 362 7 0 chr5 177212822 177212963 -22417187 - MIR3 SINE MIR -11 197 56 252 315 0 14 chr5 177213309 177213382 -22416768 + MIR SINE MIR 36 107 -155 186 224 0 0 chr5 177213392 177213441 -22416709 + (TA)n Simple_repeat Simple_repeat 2 50 0 368 151 221 0 chr5 177215124 177215210 -22414940 - MER103 DNA DNA -30 136 32 21 0 0 0 chr5 177215326 177215347 -22414803 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr5 177218489 177218528 -22411622 + AT_rich Low_complexity Low_complexity 1 39 0 2515 68 0 0 chr5 177219045 177219353 -22410797 + AluY SINE Alu 1 308 -3 224 395 58 65 chr5 177219723 177219999 -22410151 - L2 LINE L2 -8 3264 2991 5087 142 62 7 chr5 177220336 177221229 -22408921 - HSMAR2 DNA Mariner -54 1248 307 17852 72 4 2 chr5 177221229 177223661 -22406489 - L1PA6 LINE L1 -803 5343 2908 5769 79 13 0 chr5 177223661 177224440 -22405710 + L1PA6 LINE L1 5361 6153 -1 1091 67 191 17 chr5 177224441 177224619 -22405531 - HSMAR2 DNA Mariner -976 326 118 43 20 0 0 chr5 177224757 177224807 -22405343 + AT_rich Low_complexity Low_complexity 1 50 0 812 141 14 14 chr5 177224807 177224949 -22405201 + MER31A-int LTR ERV1 4773 4914 -22 1757 201 54 38 chr5 177224950 177225397 -22404753 + MER31A LTR ERV1 1 454 -31 2399 153 42 43 chr5 177225494 177226048 -22404102 + L1MA8 LINE L1 5734 6286 -5 979 276 25 6 chr5 177226223 177226589 -22403561 + L1MB7 LINE L1 4955 5327 -819 613 111 0 0 chr5 177226595 177226694 -22403456 - AluY SINE Alu -10 301 203 2441 244 122 1 chr5 177226694 177227456 -22402694 + L1MB7 LINE L1 5318 6171 -13 590 223 33 8 chr5 177227910 177228031 -22402119 - MER5A DNA MER1_type 0 189 66 1110 112 5 43 chr5 177228033 177228220 -22401930 - AluSg/x SINE Alu 0 310 131 2829 113 26 2 chr5 177229265 177229689 -22400461 + MER57B LTR ERV1 1 434 0 432 168 108 23 chr5 177229777 177229964 -22400186 + L1MA9 LINE L1 5989 6293 -19 207 0 0 0 chr5 177230205 177230228 -22399922 + (TA)n Simple_repeat Simple_repeat 1 23 0 427 295 50 7 chr5 177230234 177230373 -22399777 - MIR SINE MIR -71 191 47 23 33 0 0 chr5 177230426 177230456 -22399694 + AT_rich Low_complexity Low_complexity 1 30 0 300 53 0 0 chr5 177230642 177230680 -22399470 + (GA)n Simple_repeat Simple_repeat 1 38 0 914 232 96 82 chr5 177230911 177231402 -22398748 + MLT1D LTR MaLR 8 505 0 2074 106 3 0 chr5 177231582 177231901 -22398249 + AluSx SINE Alu 1 320 0 219 356 82 14 chr5 177232464 177232610 -22397540 - MIR3 SINE MIR -33 175 20 1784 188 24 48 chr5 177233240 177233615 -22396535 + L1MA10 LINE L1 5914 6279 -55 2126 126 0 0 chr5 177233615 177233916 -22396234 - AluSq SINE Alu -12 301 1 1784 188 24 48 chr5 177233916 177233960 -22396190 + L1MA10 LINE L1 6279 6323 -11 890 269 78 38 chr5 177234080 177234503 -22395647 + MLT1L LTR MaLR 168 607 -8 1918 268 45 21 chr5 177235612 177236228 -22393922 + Charlie1a DNA MER1_type 14 644 -811 * 2078 214 65 22 chr5 177236222 177236740 -22393410 + Charlie1a DNA MER1_type 782 1276 -1485 450 0 0 0 chr5 177236740 177236790 -22393360 + (TG)n Simple_repeat Simple_repeat 1 50 0 1702 123 0 24 chr5 177236792 177237043 -22393107 - AluSx SINE Alu -32 280 36 2078 214 65 22 chr5 177237043 177237162 -22392988 + Charlie1a DNA MER1_type 1276 1450 -5 610 272 21 20 chr5 177237214 177237434 -22392716 + L1PB4 LINE L1 5954 6165 0 221 292 62 62 chr5 177237633 177237746 -22392404 - MIR SINE MIR -34 228 116 400 264 11 11 chr5 177237805 177237896 -22392254 - L2 LINE L2 -35 3237 3147 293 361 43 19 chr5 177238054 177238262 -22391888 - L2 LINE L2 -353 2961 2749 23 33 0 0 chr5 177239285 177239315 -22390835 + AT_rich Low_complexity Low_complexity 1 30 0 236 233 200 22 chr5 177239496 177239586 -22390564 + Charlie8 DNA MER1_type 143 248 -2169 210 158 0 0 chr5 177239850 177239888 -22390262 + (TATG)n Simple_repeat Simple_repeat 2 39 0 198 0 0 0 chr5 177239891 177239913 -22390237 + (TC)n Simple_repeat Simple_repeat 1 22 0 283 337 71 48 chr5 177241491 177241743 -22388407 + MIR SINE MIR 5 262 0 395 365 103 10 chr5 177242297 177242500 -22387650 + MIR SINE MIR 11 232 -30 21 36 0 0 chr5 177243063 177243091 -22387059 + AT_rich Low_complexity Low_complexity 1 28 0 228 276 13 13 chr5 177243235 177243311 -22386839 - MER117 DNA MER1_type -33 164 89 323 376 119 20 chr5 177243674 177244078 -22386072 - L2 LINE L2 0 3272 2829 6527 112 3 3 chr5 177244168 177245091 -22385059 + THE1B-int LTR MaLR 657 1579 -1 2519 116 6 0 chr5 177245092 177245454 -22384696 + THE1B LTR MaLR 1 364 0 192 266 0 31 chr5 177246109 177246173 -22383977 + L2 LINE L2 3210 3271 -1 224 159 79 0 chr5 177247715 177247778 -22382372 + (CATATA)n Simple_repeat Simple_repeat 6 73 0 234 128 0 0 chr5 177247779 177247826 -22382324 - LTR66 LTR ERVL -170 440 394 1269 205 51 21 chr5 177247851 177248183 -22381967 + L1MA9 LINE L1 5769 6110 -202 24 67 0 0 chr5 177248200 177248245 -22381905 + AT_rich Low_complexity Low_complexity 1 45 0 2600 98 41 13 chr5 177248340 177248727 -22381423 + MLT2A1 LTR ERVL 1 398 -46 416 61 37 12 chr5 177248833 177248915 -22381235 + (TA)n Simple_repeat Simple_repeat 2 85 0 285 73 0 24 chr5 177248915 177248956 -22381194 + MLT2A1 LTR ERVL 414 453 0 21 0 0 0 chr5 177249130 177249151 -22380999 + AT_rich Low_complexity Low_complexity 1 21 0 2284 106 3 3 chr5 177250356 177250667 -22379483 - AluSp SINE Alu -2 311 1 1210 254 31 19 chr5 177250969 177251288 -22378862 + MER119 DNA MER1_type 6 328 -255 208 292 22 11 chr5 177251350 177251387 -22378763 + (TA)n Simple_repeat Simple_repeat 2 37 -54 13016 153 26 21 chr5 177251387 177253789 -22376361 + Tigger1 DNA MER2_type 3 2417 -1 208 292 22 11 chr5 177253789 177253840 -22376310 + (TA)n Simple_repeat Simple_repeat 37 91 0 282 250 0 0 chr5 177253840 177253896 -22376254 + MER119 DNA MER1_type 507 562 -21 1643 182 34 7 chr5 177254014 177254311 -22375839 + AluJo SINE Alu 8 312 0 994 214 52 15 chr5 177254459 177254730 -22375420 - L1MC2 LINE L1 -9 6335 6055 * 1721 256 42 50 chr5 177254727 177255504 -22374646 - L1M4 LINE L1 -920 5226 4456 486 0 0 0 chr5 177255578 177255632 -22374518 + (TTA)n Simple_repeat Simple_repeat 1 54 0 1330 202 4 8 chr5 177255640 177255887 -22374263 - AluJo SINE Alu -37 275 30 4977 138 13 15 chr5 177255985 177256830 -22373320 - L1PA16 LINE L1 -9 6437 5595 3141 176 4 0 chr5 177256868 177257483 -22372667 + L1MB5 LINE L1 5223 5839 -335 411 21 0 0 chr5 177257484 177257532 -22372618 + (CA)n Simple_repeat Simple_repeat 1 48 0 2833 132 13 23 chr5 177257537 177258013 -22372137 - L1PA15 LINE L1 -21 6144 5674 3577 240 62 105 chr5 177258024 177261409 -22368741 - L1PA16 LINE L1 -800 5626 2225 306 167 0 30 chr5 177261471 177261537 -22368613 + L1MC4 LINE L1 6640 6703 -1339 261 0 0 0 chr5 177261537 177261566 -22368584 + (TA)n Simple_repeat Simple_repeat 1 29 0 555 178 55 96 chr5 177261591 177261737 -22368413 - AluJo SINE Alu -92 220 81 2876 253 52 50 chr5 177261757 177262899 -22367251 - L1MCb LINE L1 -4305 2440 1302 1902 145 0 16 chr5 177262899 177263202 -22366948 - AluSx SINE Alu -14 298 1 2876 253 52 50 chr5 177263202 177264296 -22365854 - L1MCb LINE L1 -5443 1302 12 23 0 0 0 chr5 177264513 177264536 -22365614 + AT_rich Low_complexity Low_complexity 1 23 0 342 406 27 5 chr5 177264540 177264764 -22365386 - MIR SINE MIR -5 257 29 475 233 100 1 chr5 177264870 177265028 -22365122 + L1ME1 LINE L1 5829 6004 -181 277 318 101 16 chr5 177265190 177265223 -22364927 + L1ME LINE L1 5376 5405 -757 1565 207 118 3 chr5 177265223 177265605 -22364545 - MSTB LTR MaLR 0 426 1 277 318 101 16 chr5 177265605 177265760 -22364390 + L1ME LINE L1 5405 5580 -582 316 261 37 90 chr5 177265830 177265964 -22364186 + MIR SINE MIR 100 226 -36 422 296 79 55 chr5 177267424 177267677 -22362473 + MIR SINE MIR 4 262 0 22 0 0 0 chr5 177268077 177268099 -22362051 + AT_rich Low_complexity Low_complexity 1 22 0 309 262 81 87 chr5 177268198 177268370 -22361780 + HAL1 LINE L1 45 215 -2292 1211 189 40 0 chr5 177268780 177269028 -22361122 - Tigger2 DNA MER2_type -10 2708 2451 4248 143 33 8 chr5 177269092 177269817 -22360333 - Tigger2 DNA MER2_type -1974 744 2 324 264 10 145 chr5 177270338 177270531 -22359619 + HAL1 LINE L1 535 701 -1806 305 221 47 54 chr5 177271008 177271157 -22358993 - L1ME4a LINE L1 0 6121 5974 182 329 0 53 chr5 177271293 177271369 -22358781 - L2 LINE L2 -2080 1234 1163 400 303 31 48 chr5 177272456 177272684 -22357466 + MIR SINE MIR 39 262 0 6988 156 37 9 chr5 177274493 177275757 -22354393 + HSMAR2 DNA Mariner 2 1300 -2 307 381 77 18 chr5 177276106 177276392 -22353758 - MLT1K LTR MaLR -198 390 88 196 333 14 14 chr5 177276903 177276975 -22353175 + MIR SINE MIR 2 73 -189 182 329 25 25 chr5 177277241 177277320 -22352830 - MIR3 SINE MIR -46 162 84 213 204 19 19 chr5 177277487 177277541 -22352609 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 455 281 105 33 chr5 177278127 177278527 -22351623 + L1MC4a LINE L1 5484 5816 -305 246 160 0 0 chr5 177279980 177280030 -22350120 + (CA)n Simple_repeat Simple_repeat 2 51 0 386 345 115 28 chr5 177280153 177280579 -22349571 - L3 LINE CR1 -513 1064 602 21 0 0 0 chr5 177281001 177281022 -22349128 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 177281107 177281138 -22349012 + AT_rich Low_complexity Low_complexity 1 31 0 221 274 65 0 chr5 177281304 177281366 -22348784 - L2 LINE L2 -1 3271 3206 435 285 134 41 chr5 177281926 177282098 -22348052 - MIR SINE MIR -68 194 7 537 333 28 19 chr5 177282293 177282509 -22347641 + MIR SINE MIR 30 247 -15 28 29 0 0 chr5 177282690 177282725 -22347425 + AT_rich Low_complexity Low_complexity 1 35 0 1739 106 0 4 chr5 177283529 177283775 -22346375 + AluSg/x SINE Alu 68 312 0 235 317 48 19 chr5 177283842 177283946 -22346204 - L2 LINE L2 -12 3301 3195 690 176 7 15 chr5 177286064 177286200 -22343950 + FLAM_C SINE Alu 1 135 -8 296 370 53 70 chr5 177286403 177286703 -22343447 + L2 LINE L2 2926 3220 -52 1701 175 27 21 chr5 177287164 177287501 -22342649 - MER44D DNA MER2_type 0 609 1 3518 230 101 42 chr5 177288025 177289325 -22340825 - L1MD2 LINE L1 -10 6349 4863 2271 100 0 0 chr5 177289325 177289635 -22340515 - AluSq SINE Alu -3 310 1 3518 230 101 42 chr5 177289635 177290524 -22339626 - L1MD2 LINE L1 -1496 4863 4028 419 266 82 54 chr5 177290591 177290723 -22339427 - MER63A DNA MER1_type -1492 196 56 2389 146 21 32 chr5 177290723 177291156 -22338994 + MSTA LTR MaLR 1 428 0 419 266 82 54 chr5 177291156 177291207 -22338943 - MER63A DNA MER1_type -1632 56 8 450 326 177 19 chr5 177291473 177291903 -22338247 - L2 LINE L2 -343 2971 2474 413 329 27 40 chr5 177291993 177292218 -22337932 + MIR SINE MIR 14 235 -27 1892 97 29 11 chr5 177292727 177293037 -22337113 + AluSx SINE Alu 1 315 0 1106 284 50 23 chr5 177293374 177293938 -22336212 - L1MD2 LINE L1 -3233 2913 2335 370 211 119 28 chr5 177294102 177294211 -22335939 - L2 LINE L2 -1 3312 3194 2345 124 6 0 chr5 177294710 177295066 -22335084 - L1PA13 LINE L1 -19 6144 5787 23 33 0 0 chr5 177295420 177295450 -22334700 + AT_rich Low_complexity Low_complexity 1 30 0 888 279 74 104 chr5 177295561 177296542 -22333608 + L1M4 LINE L1 2455 3385 -2761 7495 31 0 2 chr5 177296542 177297592 -22332558 + L1PA4 LINE L1 5105 6152 -3 888 279 74 104 chr5 177297592 177297975 -22332175 + L1M4 LINE L1 3385 3778 -2368 22 56 0 0 chr5 177298011 177298047 -22332103 + AT_rich Low_complexity Low_complexity 1 36 0 265 269 96 45 chr5 177298116 177298272 -22331878 + L1M4 LINE L1 4110 4273 -1873 227 200 0 0 chr5 177298497 177298542 -22331608 + L1M4 LINE L1 4481 4525 -1621 349 301 43 59 chr5 177298607 177298793 -22331357 + L1ME3 LINE L1 5884 6066 -96 31 44 0 0 chr5 177298847 177298892 -22331258 + AT_rich Low_complexity Low_complexity 1 45 0 25 0 0 0 chr5 177299425 177299450 -22330700 + AT_rich Low_complexity Low_complexity 1 25 0 6333 58 2 0 chr5 177300166 177300958 -22329192 - L1PA7 LINE L1 -13 6141 5348 444 188 0 0 chr5 177301127 177301207 -22328943 - AluJ/FLAM SINE Alu -232 80 1 195 129 0 0 chr5 177301225 177301256 -22328894 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 919 259 8 4 chr5 177301278 177301514 -22328636 - L1ME1 LINE L1 -99 6067 5831 290 153 17 0 chr5 177301641 177301700 -22328450 + (TA)n Simple_repeat Simple_repeat 2 61 0 518 269 101 39 chr5 177301934 177301968 -22328182 + MIR SINE MIR 2 32 -230 2368 70 0 7 chr5 177301968 177302266 -22327884 + AluY SINE Alu 1 296 -15 518 269 101 39 chr5 177302266 177302439 -22327711 + MIR SINE MIR 32 222 -40 22 56 0 0 chr5 177303706 177303742 -22326408 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 177304338 177304359 -22325791 + AT_rich Low_complexity Low_complexity 1 21 0 457 246 32 149 chr5 177304519 177304800 -22325350 + MIR SINE MIR 15 262 0 543 56 0 0 chr5 177305483 177305554 -22324596 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 306 284 56 116 chr5 177305661 177305981 -22324169 - MLT1K LTR MaLR -88 500 200 229 204 0 20 chr5 177306349 177306398 -22323752 - MIR SINE MIR -101 161 114 589 305 36 53 chr5 177306536 177306838 -22323312 - MER102b DNA MER1_type -21 320 24 1925 143 50 34 chr5 177307236 177307594 -22322556 - THE1B LTR MaLR 0 364 1 10642 98 19 15 chr5 177307594 177309168 -22320982 - THE1B-int LTR MaLR 0 1580 1 2083 139 51 20 chr5 177309168 177309521 -22320629 - THE1B LTR MaLR 0 364 1 261 128 0 0 chr5 177309682 177309729 -22320421 + (TC)n Simple_repeat Simple_repeat 2 48 0 2600 39 0 10 chr5 177309936 177310245 -22319905 - AluY SINE Alu -5 306 1 387 316 91 37 chr5 177310416 177310603 -22319547 + L2 LINE L2 2833 3029 -284 213 333 61 8 chr5 177310668 177310800 -22319350 + L2 LINE L2 3147 3285 -28 248 268 130 0 chr5 177310941 177311064 -22319086 + L2 LINE L2 3147 3285 -28 242 320 93 21 chr5 177312264 177312361 -22317789 + MIR SINE MIR 43 146 -62 242 231 30 41 chr5 177312640 177312729 -22317421 + MIR SINE MIR 78 167 -41 1713 186 10 0 chr5 177313281 177313577 -22316573 + AluSx SINE Alu 1 299 -13 2975 152 10 3 chr5 177314709 177315533 -22314617 - L1M1 LINE L1 -590 5715 4885 * 5985 102 18 28 chr5 177315532 177316518 -22313632 + L1MA3 LINE L1 5330 6305 0 680 281 47 118 chr5 177316730 177317197 -22312953 + MLT1J LTR MaLR 78 511 0 1210 251 72 25 chr5 177317708 177318067 -22312083 + MLT1F1 LTR MaLR 177 552 -15 22 0 0 0 chr5 177318110 177318132 -22312018 + AT_rich Low_complexity Low_complexity 1 22 0 532 207 0 17 chr5 177318134 177318250 -22311900 + FRAM SINE Alu 62 175 -1 863 225 5 63 chr5 177318467 177318689 -22311461 - MER20 DNA MER1_type -1 218 10 336 24 0 0 chr5 177318934 177318975 -22311175 + (TG)n Simple_repeat Simple_repeat 2 42 0 1484 202 7 21 chr5 177320048 177320335 -22309815 - AluJo SINE Alu -29 283 1 2342 103 0 0 chr5 177320861 177321172 -22308978 + AluSq SINE Alu 1 311 -2 1208 209 101 41 chr5 177322117 177322287 -22307863 + MLT1B LTR MaLR 1 159 -231 2013 121 0 48 chr5 177322287 177322602 -22307548 + AluSg SINE Alu 1 300 -10 1208 209 101 41 chr5 177322602 177322799 -22307351 + MLT1B LTR MaLR 159 390 0 22 56 0 0 chr5 177322881 177322917 -22307233 + AT_rich Low_complexity Low_complexity 1 36 0 22 99 0 0 chr5 177323108 177323179 -22306971 + AT_rich Low_complexity Low_complexity 1 71 0 393 225 115 29 chr5 177323412 177323621 -22306529 - L1M4 LINE L1 -2207 3939 3713 326 299 10 21 chr5 177323699 177323796 -22306354 - L1MC4 LINE L1 -1334 6708 6613 508 289 43 39 chr5 177323796 177324054 -22306096 - L1M4 LINE L1 -2451 3695 3437 1553 119 8 0 chr5 177324068 177324311 -22305839 - L1MA2 LINE L1 -1 6303 6059 213 74 37 37 chr5 177324523 177324577 -22305573 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 192 77 0 0 chr5 177324715 177324741 -22305409 + (TG)n Simple_repeat Simple_repeat 1 26 0 1300 282 19 52 chr5 177324742 177325168 -22304982 - MLT2F LTR ERVL -64 599 188 278 261 33 11 chr5 177325186 177325278 -22304872 - MLT1F1 LTR MaLR -409 158 65 23 0 0 0 chr5 177326177 177326200 -22303950 + AT_rich Low_complexity Low_complexity 1 23 0 5716 174 16 8 chr5 177326204 177326345 -22303805 - L1PB2 LINE L1 -39 6112 5974 1575 161 0 4 chr5 177326345 177326610 -22303540 - AluSx SINE Alu 0 305 42 5716 174 16 8 chr5 177326610 177328498 -22301652 - L1PB2 LINE L1 -177 5974 4061 1538 142 0 30 chr5 177328821 177329124 -22301026 - AluSc SINE Alu -14 295 2 2174 114 13 0 chr5 177329327 177329633 -22300517 + AluSq SINE Alu 1 310 -3 264 286 131 11 chr5 177329649 177329824 -22300326 - L1ME LINE L1 -274 5847 5652 186 118 0 0 chr5 177330159 177330193 -22299957 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 2373 86 0 3 chr5 177330990 177331291 -22298859 - AluSp SINE Alu -13 300 1 530 108 12 0 chr5 177331437 177331520 -22298630 + L1MA4 LINE L1 6197 6280 -20 359 268 95 82 chr5 177331838 177332219 -22297931 + MLT1J LTR MaLR 7 422 -89 1168 109 14 43 chr5 177332243 177332454 -22297696 + L1MA4 LINE L1 6084 6288 -12 1835 129 4 0 chr5 177332698 177332954 -22297196 + AluSx SINE Alu 1 257 -55 182 289 52 82 chr5 177333034 177333169 -22296981 + MER5A DNA MER1_type 2 132 -57 201 133 0 0 chr5 177333241 177333271 -22296879 + (GATTG)n Simple_repeat Simple_repeat 3 32 0 2093 135 0 3 chr5 177333553 177333849 -22296301 - AluJb SINE Alu -17 295 1 628 209 196 0 chr5 177333951 177334109 -22296041 + MER5A DNA MER1_type 1 189 0 427 284 35 41 chr5 177335152 177335349 -22294801 - MER102b DNA MER1_type -10 331 136 1118 167 6 0 chr5 177335349 177335523 -22294627 - FAM SINE Alu 0 175 1 1401 199 21 7 chr5 177335527 177335813 -22294337 - AluJb SINE Alu -11 301 12 1179 181 0 94 chr5 177336284 177336424 -22293726 - L1 LINE L1 -2025 4121 4020 2124 94 3 14 chr5 177336424 177336710 -22293440 - AluSg1 SINE Alu -26 283 1 1179 181 0 94 chr5 177336710 177336856 -22293294 - L1 LINE L1 -2126 4020 3862 2762 189 5 60 chr5 177336879 177337530 -22292620 - L1 LINE L1 -3117 3029 2415 2452 115 8 8 chr5 177337742 177338106 -22292044 - THE1B LTR MaLR 0 364 1 232 175 0 48 chr5 177338472 177338535 -22291615 - L1ME4a LINE L1 -5 6396 6337 198 0 0 0 chr5 177338621 177338643 -22291507 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 410 312 66 53 chr5 177338644 177338945 -22291205 - L1ME4a LINE L1 -207 6194 5890 1663 181 10 13 chr5 177339050 177339348 -22290802 + AluSx SINE Alu 1 297 -15 199 336 187 28 chr5 177339690 177339797 -22290353 - MIR SINE MIR -111 151 28 7136 182 34 7 chr5 177339809 177340304 -22289846 + L1MA5 LINE L1 3755 4235 -2065 2591 123 5 0 chr5 177340304 177340677 -22289473 + THE1C LTR MaLR 1 375 0 7136 182 34 7 chr5 177340677 177342655 -22287495 + L1MA5 LINE L1 4235 6300 0 477 277 56 20 chr5 177342898 177343147 -22287003 - L1ME3 LINE L1 -1 6161 5904 391 276 126 18 chr5 177343135 177343468 -22286682 - L1ME4a LINE L1 -543 5899 5544 * 751 303 30 11 chr5 177343561 177343934 -22286216 - L1ME4a LINE L1 -1072 5354 4975 566 290 54 11 chr5 177344002 177344188 -22285962 - L1ME4a LINE L1 -5952 474 281 240 289 63 57 chr5 177344445 177344794 -22285356 - L1MEc LINE L1 -4188 2533 2183 27 0 0 0 chr5 177345099 177345126 -22285024 + AT_rich Low_complexity Low_complexity 1 27 0 507 313 90 55 chr5 177345313 177345680 -22284470 - L1MEc LINE L1 -4861 1679 1300 590 194 8 16 chr5 177345910 177346034 -22284116 + L1M1 LINE L1 561 683 -6882 222 37 0 0 chr5 177346777 177346804 -22283346 + (TG)n Simple_repeat Simple_repeat 1 27 0 5500 204 15 38 chr5 177347377 177348561 -22281589 + L1MA1 LINE L1 12 1168 -6397 6834 149 22 22 chr5 177348616 177350971 -22279179 + L1MA1 LINE L1 5349 7721 0 22 25 0 25 chr5 177351629 177351649 -22278501 + AT_rich Low_complexity Low_complexity 1 20 -19 694 155 0 54 chr5 177351649 177351778 -22278372 - FLAM_A SINE Alu -11 122 1 22 25 0 25 chr5 177351778 177351797 -22278353 + AT_rich Low_complexity Low_complexity 20 39 0 181 361 50 17 chr5 177352037 177352156 -22277994 - MIR3 SINE MIR -83 125 3 387 293 189 12 chr5 177352269 177352518 -22277632 - L2 LINE L2 -1 3312 3020 5576 177 36 32 chr5 177354034 177355325 -22274825 + L1 LINE L1 3403 4698 -1448 267 203 0 0 chr5 177355327 177355386 -22274764 + GA-rich Low_complexity Low_complexity 3 61 0 437 316 39 7 chr5 177355933 177356088 -22274062 + L1ME3A LINE L1 5488 5647 -515 6276 70 5 21 chr5 177356121 177356967 -22273183 + HERVL-A1 LTR ERVL 4823 5654 0 2742 123 53 5 chr5 177356967 177357350 -22272800 + MLT2A1 LTR ERVL 1 407 -37 219 103 0 0 chr5 177357350 177357389 -22272761 + (TA)n Simple_repeat Simple_repeat 1 39 0 2742 123 53 5 chr5 177357389 177357421 -22272729 + MLT2A1 LTR ERVL 407 436 -8 25 0 0 0 chr5 177357422 177357447 -22272703 + AT_rich Low_complexity Low_complexity 1 25 0 32496 34 17 1 chr5 177357524 177363551 -22266599 - L1PA2 LINE L1 0 6155 1 365 350 38 18 chr5 177363552 177363757 -22266393 + L1ME3A LINE L1 5766 5949 -221 22 56 0 0 chr5 177364063 177364099 -22266051 + AT_rich Low_complexity Low_complexity 1 36 0 252 0 0 0 chr5 177364353 177364381 -22265769 + (TG)n Simple_repeat Simple_repeat 1 28 0 282 280 53 27 chr5 177364787 177364937 -22265213 + MER103 DNA DNA 3 156 -10 928 212 119 58 chr5 177365136 177365480 -22264670 + MLT1A1 LTR MaLR 1 365 0 212 177 13 38 chr5 177365517 177365596 -22264554 + (TA)n Simple_repeat Simple_repeat 2 78 0 185 333 13 13 chr5 177366209 177366284 -22263866 + MIR3 SINE MIR 131 205 -3 324 311 19 9 chr5 177367142 177367248 -22262902 - MIR SINE MIR -111 151 45 3809 118 20 2 chr5 177367279 177367870 -22262280 - L1MA1 LINE L1 0 6302 5701 353 248 40 20 chr5 177368086 177368187 -22261963 + MIR3 SINE MIR 78 180 -28 213 39 0 0 chr5 177368292 177368318 -22261832 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 208 170 19 38 chr5 177368432 177368485 -22261665 + T-rich Low_complexity Low_complexity 1 52 0 189 159 29 14 chr5 177368527 177368596 -22261554 + (TA)n Simple_repeat Simple_repeat 2 71 0 232 309 43 11 chr5 177368749 177368843 -22261307 - MLT1L LTR MaLR -8 607 511 506 261 151 54 chr5 177368909 177369261 -22260889 - MLT1L LTR MaLR -229 386 1 226 177 25 38 chr5 177369318 177369397 -22260753 - L1M2 LINE L1 -724 5432 5355 369 269 65 76 chr5 177369802 177370077 -22260073 + L2 LINE L2 3042 3313 0 672 120 9 0 chr5 177370175 177370283 -22259867 - AluY SINE Alu -16 295 187 27 0 0 0 chr5 177370442 177370469 -22259681 + AT_rich Low_complexity Low_complexity 1 27 0 183 42 0 0 chr5 177370773 177370797 -22259353 + (GA)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr5 177371226 177371255 -22258895 + AT_rich Low_complexity Low_complexity 1 29 0 2044 134 0 7 chr5 177371466 177371773 -22258377 + AluSg1 SINE Alu 1 305 -4 364 315 119 14 chr5 177371979 177372198 -22257952 + MIR SINE MIR 1 242 -20 1509 188 3 40 chr5 177372512 177372815 -22257335 + AluJo SINE Alu 2 293 -19 22 35 0 0 chr5 177373293 177373322 -22256828 + AT_rich Low_complexity Low_complexity 1 29 0 236 241 140 58 chr5 177373528 177373735 -22256415 + L1ME4a LINE L1 5713 5936 -185 464 198 0 23 chr5 177373736 177373822 -22256328 - MLT1A2 LTR MaLR -286 88 5 1053 192 38 38 chr5 177373826 177374066 -22256084 - MLT1A2-int LTR MaLR 0 1735 1496 1991 271 100 3 chr5 177374067 177374639 -22255511 - ERVL LTR ERVL -2241 3244 2618 1084 285 37 10 chr5 177374628 177374926 -22255224 - ERVL LTR ERVL -5243 521 216 * 221 238 0 0 chr5 177375265 177375307 -22254843 + (CA)n Simple_repeat Simple_repeat 1 42 0 1925 149 7 0 chr5 177375328 177375649 -22254501 - AluSq SINE Alu 0 324 2 21 36 0 0 chr5 177375722 177375750 -22254400 + AT_rich Low_complexity Low_complexity 1 28 0 188 218 164 0 chr5 177376529 177376584 -22253566 + L2 LINE L2 3200 3263 -9 23 0 0 0 chr5 177376593 177376616 -22253534 + AT_rich Low_complexity Low_complexity 1 23 0 29 60 0 0 chr5 177376632 177376682 -22253468 + AT_rich Low_complexity Low_complexity 1 50 0 432 301 30 54 chr5 177376756 177376959 -22253191 - MIR SINE MIR -32 230 33 270 81 0 0 chr5 177376993 177377030 -22253120 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 234 105 0 0 chr5 177377611 177377649 -22252501 + (T)n Simple_repeat Simple_repeat 1 38 0 250 383 33 33 chr5 177378221 177378404 -22251746 + MIR3 SINE MIR 9 191 -17 290 357 62 16 chr5 177378668 177378797 -22251353 + L2 LINE L2 3138 3272 0 219 69 0 0 chr5 177378800 177378829 -22251321 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 345 324 122 41 chr5 177379328 177379922 -22250228 - L2 LINE L2 -199 3073 2438 2631 148 7 5 chr5 177380229 177380662 -22249488 - MER57B LTR ERV1 0 434 1 1577 186 3 23 chr5 177380696 177380997 -22249153 + AluJo SINE Alu 3 297 -15 4753 44 3 3 chr5 177381535 177382121 -22248029 - L1PA5 LINE L1 -2 6152 5567 252 153 68 0 chr5 177382144 177382203 -22247947 + T-rich Low_complexity Low_complexity 1 63 0 3974 173 53 12 chr5 177382217 177383032 -22247118 + L1MC2 LINE L1 5319 6166 -178 390 130 6 3 chr5 177383033 177383269 -22246881 + AluSx SINE Alu 1 305 0 1840 147 7 3 chr5 177383273 177383566 -22246584 + AluSx SINE Alu 1 294 -18 598 241 27 43 chr5 177383566 177383753 -22246397 + L1MC2 LINE L1 6161 6344 0 370 271 81 5 chr5 177383759 177383980 -22246170 + MER20B DNA MER1_type 534 771 -12 222 228 0 35 chr5 177384378 177384435 -22245715 - L2 LINE L2 -9 3304 3250 392 261 96 19 chr5 177384467 177384624 -22245526 - MLT1H LTR MaLR -293 256 88 263 313 170 9 chr5 177384876 177384988 -22245162 - MIR SINE MIR -58 150 21 444 353 67 27 chr5 177385098 177385322 -22244828 + MIR SINE MIR 15 247 -15 1252 282 77 26 chr5 177385362 177386025 -22244125 - L1ME2 LINE L1 -19 6079 5383 2598 70 0 0 chr5 177386027 177386357 -22243793 + L1P LINE L1 4044 4373 -1773 482 270 37 21 chr5 177386463 177386652 -22243498 - L1ME2 LINE L1 -3605 2475 2284 1385 267 52 35 chr5 177386660 177386937 -22243213 - L1ME2 LINE L1 -4176 2085 1814 1745 169 65 94 chr5 177386937 177387198 -22242952 + LTR54 LTR ERV1 4 244 -266 1653 207 0 3 chr5 177387198 177387503 -22242647 + AluJo SINE Alu 1 304 -8 1745 169 65 94 chr5 177387503 177387763 -22242387 + LTR54 LTR ERV1 244 510 0 1385 267 52 35 chr5 177387763 177388140 -22242010 - L1ME2 LINE L1 -4447 1814 1420 687 214 28 0 chr5 177388149 177388294 -22241856 + FAM SINE Alu 1 149 -36 914 96 22 22 chr5 177388294 177388472 -22241678 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 618 269 60 66 chr5 177388476 177389011 -22241139 - L1ME2 LINE L1 -4837 1424 888 1674 150 0 51 chr5 177389011 177389304 -22240846 + AluSx SINE Alu 1 278 -34 252 59 0 0 chr5 177389304 177389338 -22240812 + (TAA)n Simple_repeat Simple_repeat 1 34 0 618 269 60 66 chr5 177389338 177389507 -22240643 - L1ME2 LINE L1 -5371 890 559 195 139 0 0 chr5 177389529 177389565 -22240585 + (TA)n Simple_repeat Simple_repeat 2 37 0 334 301 77 85 chr5 177389866 177390138 -22240012 - L1ME2 LINE L1 -5549 521 252 265 267 40 13 chr5 177390140 177390215 -22239935 + MER81 DNA DNA 9 85 -29 297 0 0 0 chr5 177390262 177390295 -22239855 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 1748 138 25 4 chr5 177390295 177390570 -22239580 - AluSq SINE Alu -32 281 1 1302 239 88 52 chr5 177391042 177391600 -22238550 + MER39 LTR ERV1 35 558 -7 238 306 28 76 chr5 177392187 177392331 -22237819 + Charlie8 DNA MER1_type 129 265 -2152 384 22 0 0 chr5 177392406 177392451 -22237699 + (CA)n Simple_repeat Simple_repeat 2 46 0 880 196 0 0 chr5 177392560 177392708 -22237442 + FRAM SINE Alu 1 144 -32 191 315 11 33 chr5 177397339 177397431 -22232719 + MER5B DNA MER1_type 15 104 -74 * 259 322 25 76 chr5 177397354 177397472 -22232678 - MER5A DNA MER1_type -28 161 50 216 239 0 28 chr5 177397726 177397797 -22232353 + (TA)n Simple_repeat Simple_repeat 1 69 0 21 57 0 0 chr5 177397880 177397915 -22232235 + AT_rich Low_complexity Low_complexity 1 35 0 217 224 17 0 chr5 177399263 177399321 -22230829 + (CA)n Simple_repeat Simple_repeat 2 60 0 182 347 53 13 chr5 177399353 177399428 -22230722 - MIR SINE MIR -62 146 69 214 284 14 0 chr5 177399434 177399508 -22230642 + (TA)n Simple_repeat Simple_repeat 2 76 0 218 263 18 0 chr5 177399614 177399671 -22230479 + MIR3 SINE MIR 151 208 0 273 282 88 44 chr5 177401869 177402050 -22228100 + L2 LINE L2 2947 3135 -178 188 281 0 35 chr5 177402389 177402446 -22227704 + MIR SINE MIR 1 55 -207 1489 182 4 0 chr5 177402505 177402758 -22227392 + AluJo SINE Alu 38 291 -21 191 408 10 0 chr5 177403451 177403549 -22226601 + L2 LINE L2 2587 2685 -629 870 246 137 61 chr5 177403567 177403671 -22226479 - L1ME2 LINE L1 -2 6162 6067 270 0 0 0 chr5 177403671 177403701 -22226449 + (TG)n Simple_repeat Simple_repeat 1 30 0 870 246 137 61 chr5 177403701 177404152 -22225998 - L1ME2 LINE L1 -97 6067 5565 749 322 70 25 chr5 177404204 177404672 -22225478 - MLT1F1 LTR MaLR 0 567 58 765 205 43 6 chr5 177404702 177404863 -22225287 - MLT1A1 LTR MaLR -17 348 182 207 0 0 0 chr5 177404959 177404982 -22225168 + (TA)n Simple_repeat Simple_repeat 1 23 0 2311 97 3 0 chr5 177404982 177405290 -22224860 - AluY SINE Alu -2 309 1 72 40 0 0 chr5 177405534 177405634 -22224516 + AT_rich Low_complexity Low_complexity 1 100 0 440 298 46 8 chr5 177406094 177406225 -22223925 - L2 LINE L2 -31 3282 3147 1202 144 16 0 chr5 177406359 177406546 -22223604 - AluSg/x SINE Alu -3 309 120 403 333 155 27 chr5 177406707 177407192 -22222958 - L2 LINE L2 -9 3304 2759 22 0 0 0 chr5 177407795 177407817 -22222333 + AT_rich Low_complexity Low_complexity 1 22 0 311 102 20 0 chr5 177408176 177408225 -22221925 - L1ME1 LINE L1 -289 5877 5828 * 1317 197 23 30 chr5 177408220 177408524 -22221626 + L1ME LINE L1 5366 5667 -499 1027 294 53 17 chr5 177410421 177410893 -22219257 + MER113 DNA MER1_type? 32 520 -1 423 304 133 13 chr5 177411064 177411222 -22218928 + MER5B DNA MER1_type 1 177 -1 412 316 44 0 chr5 177411686 177411844 -22218306 - L1ME1 LINE L1 -326 5844 5680 189 178 0 0 chr5 177412110 177412155 -22217995 + T-rich Low_complexity Low_complexity 1 45 0 3387 93 0 8 chr5 177412157 177412640 -22217510 - L1PA13 LINE L1 -1 6162 5684 967 304 100 35 chr5 177413026 177413654 -22216496 - L1ME3A LINE L1 -8 6162 5498 304 291 78 0 chr5 177415363 177415466 -22214684 + MIR SINE MIR 123 233 -29 329 296 158 28 chr5 177415547 177415800 -22214350 - L2 LINE L2 -102 3211 2926 29 60 0 0 chr5 177416209 177416259 -22213891 + AT_rich Low_complexity Low_complexity 1 50 0 494 203 8 0 chr5 177416831 177416949 -22213201 + (CATATA)n Simple_repeat Simple_repeat 6 124 0 387 288 185 7 chr5 177416994 177417140 -22213010 - MER5A DNA MER1_type -4 185 14 31 26 0 0 chr5 177417860 177417898 -22212252 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 177417926 177417948 -22212202 + AT_rich Low_complexity Low_complexity 1 22 0 406 259 82 82 chr5 177417967 177418199 -22211951 - MIR SINE MIR -27 235 4 228 67 0 0 chr5 177418493 177418523 -22211627 + (GA)n Simple_repeat Simple_repeat 1 30 0 277 270 20 30 chr5 177419122 177419222 -22210928 + (CATA)n Simple_repeat Simple_repeat 3 101 0 406 288 42 70 chr5 177421046 177421261 -22208889 - MLT1H LTR MaLR -241 308 100 315 259 17 9 chr5 177422604 177422720 -22207430 + (TATAA)n Simple_repeat Simple_repeat 4 120 0 25 0 0 0 chr5 177423072 177423097 -22207053 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr5 177423457 177423486 -22206664 + AT_rich Low_complexity Low_complexity 1 29 0 727 207 5 84 chr5 177423732 177423935 -22206215 + MER20 DNA MER1_type 3 189 -30 21 0 0 0 chr5 177425051 177425072 -22205078 + AT_rich Low_complexity Low_complexity 1 21 0 252 370 11 0 chr5 177425152 177425244 -22204906 + MIR SINE MIR 6 98 -164 320 306 104 22 chr5 177425462 177425596 -22204554 + MIR SINE MIR 92 236 -26 21 0 0 0 chr5 177425602 177425623 -22204527 + AT_rich Low_complexity Low_complexity 1 21 0 1373 166 32 35 chr5 177425853 177426160 -22203990 - AluJb SINE Alu 0 306 1 21 36 0 0 chr5 177426501 177426529 -22203621 + AT_rich Low_complexity Low_complexity 1 28 0 313 316 42 21 chr5 177426628 177426723 -22203427 + MIR SINE MIR 5 101 -161 1184 171 0 9 chr5 177429098 177429337 -22200813 - AluJb SINE Alu 0 312 85 227 298 87 29 chr5 177429703 177429807 -22200343 - MIR SINE MIR -85 177 68 25 31 0 0 chr5 177430870 177430902 -22199248 + AT_rich Low_complexity Low_complexity 1 32 0 384 307 67 49 chr5 177431055 177431280 -22198870 + MIR SINE MIR 13 241 -21 284 310 55 41 chr5 177431357 177431502 -22198648 - Charlie8 DNA MER1_type -2261 156 10 2429 62 0 3 chr5 177432028 177432334 -22197816 - AluY SINE Alu -6 305 1 339 25 0 0 chr5 177432413 177432453 -22197697 + (CA)n Simple_repeat Simple_repeat 2 41 0 2103 150 21 16 chr5 177433458 177433831 -22196319 - L1PA13 LINE L1 -2 6161 5787 444 278 89 30 chr5 177433839 177434177 -22195973 + MER113 DNA MER1_type? 121 478 -43 287 370 98 24 chr5 177434287 177434584 -22195566 + L2 LINE L2 2353 2671 -643 264 332 128 38 chr5 177434600 177434835 -22195315 - MIR SINE MIR -1 261 6 360 318 0 0 chr5 177435206 177435291 -22194859 + MIR SINE MIR 35 119 -143 1432 56 0 3 chr5 177435467 177435642 -22194508 - L1PA5 LINE L1 -359 5796 5622 3049 33 0 0 chr5 177435642 177436000 -22194150 + L1PA5 LINE L1 5780 6139 -15 267 54 0 0 chr5 177436000 177436037 -22194113 + (TA)n Simple_repeat Simple_repeat 2 38 0 1432 56 0 3 chr5 177436037 177436060 -22194090 - L1P4 LINE L1 -531 5624 5603 21 0 0 0 chr5 177436976 177436997 -22193153 + AT_rich Low_complexity Low_complexity 1 21 0 264 30 0 0 chr5 177437233 177437266 -22192884 + (CAA)n Simple_repeat Simple_repeat 2 34 0 340 267 0 12 chr5 177437549 177437635 -22192515 + MIR3 SINE MIR 90 174 -34 354 270 37 40 chr5 177438027 177438225 -22191925 - MLT1J LTR MaLR -251 195 5 378 271 42 0 chr5 177438242 177438338 -22191812 - MIR SINE MIR -74 188 89 1805 145 45 0 chr5 177439521 177439840 -22190310 - AluSx SINE Alu 0 312 1 248 274 53 53 chr5 177440747 177440842 -22189308 + Charlie8 DNA MER1_type 181 275 -2142 23 33 0 0 chr5 177440994 177441024 -22189126 + AT_rich Low_complexity Low_complexity 1 30 0 840 81 0 9 chr5 177441030 177441169 -22188981 + AluSp/q SINE Alu 176 313 0 203 136 0 45 chr5 177441528 177441572 -22188578 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 346 370 20 27 chr5 177441751 177441897 -22188253 + MIR3 SINE MIR 52 196 -12 207 236 18 0 chr5 177442414 177442469 -22187681 + (TAA)n Simple_repeat Simple_repeat 2 57 0 243 281 169 0 chr5 177442469 177442558 -22187592 - MIR SINE MIR -30 232 129 369 62 0 0 chr5 177442700 177442748 -22187402 + (TG)n Simple_repeat Simple_repeat 2 49 0 277 107 18 18 chr5 177442820 177442876 -22187274 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 323 240 0 13 chr5 177442911 177442986 -22187164 - MLT1I LTR MaLR 0 409 336 184 206 88 73 chr5 177443430 177443498 -22186652 - L2 LINE L2 -288 3025 2957 218 105 26 0 chr5 177444462 177444500 -22185650 + (ATG)n Simple_repeat Simple_repeat 3 41 0 196 309 0 0 chr5 177444512 177444567 -22185583 - MIR SINE MIR -6 256 202 291 28 0 0 chr5 177444805 177444841 -22185309 + (TG)n Simple_repeat Simple_repeat 2 37 0 253 310 59 48 chr5 177447174 177447361 -22182789 + MIR SINE MIR 23 211 -51 267 264 0 28 chr5 177448273 177448345 -22181805 + L2 LINE L2 3242 3311 -2 198 191 0 0 chr5 177449453 177449495 -22180655 + A-rich Low_complexity Low_complexity 4 45 0 542 320 70 9 chr5 177450232 177450460 -22179690 - MIR SINE MIR -14 248 7 180 0 0 0 chr5 177451132 177451152 -22178998 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 207 0 0 0 chr5 177451157 177451180 -22178970 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 333 0 0 0 chr5 177451557 177451594 -22178556 + (TG)n Simple_repeat Simple_repeat 2 38 0 1279 282 74 43 chr5 177452227 177452783 -22177367 - L2 LINE L2 -2141 1173 601 223 368 47 9 chr5 177452787 177452893 -22177257 - L2 LINE L2 -3201 113 4 335 294 84 60 chr5 177453173 177453424 -22176726 + L2 LINE L2 2750 3016 -256 219 282 13 39 chr5 177453458 177453536 -22176614 + L2 LINE L2 3185 3260 -12 299 283 49 3 chr5 177454408 177454499 -22175651 - MIR SINE MIR -76 132 40 196 315 0 0 chr5 177455295 177455349 -22174801 + MIR3 SINE MIR 116 169 -39 353 345 159 7 chr5 177455455 177455600 -22174550 + MIR3 SINE MIR 32 198 -10 301 308 60 49 chr5 177456108 177456293 -22173857 - MIR SINE MIR -10 252 66 29 0 0 0 chr5 177456428 177456457 -22173693 + AT_rich Low_complexity Low_complexity 1 29 0 303 353 26 39 chr5 177456465 177456621 -22173529 - MIR3 SINE MIR -32 176 23 260 213 213 8 chr5 177457844 177457966 -22172184 + MER103 DNA DNA 1 147 -19 302 274 15 82 chr5 177458677 177458812 -22171338 - MIR SINE MIR -85 177 52 251 385 0 31 chr5 177460789 177460919 -22169231 + MIR3 SINE MIR 60 185 -23 763 290 28 18 chr5 177461007 177461224 -22168926 - MIR SINE MIR -4 258 40 369 318 5 53 chr5 177461235 177461424 -22168726 + LTR16A1 LTR ERVL 1 180 -277 482 308 0 0 chr5 177462034 177462151 -22167999 - L2 LINE L2 0 3313 3197 198 0 0 0 chr5 177462480 177462502 -22167648 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 677 217 14 7 chr5 177462862 177463000 -22167150 + MER3 DNA MER1_type 2 140 -69 207 0 0 0 chr5 177463073 177463096 -22167054 + (TGG)n Simple_repeat Simple_repeat 2 24 0 340 331 73 45 chr5 177463893 177464240 -22165910 - L1MC/D LINE L1 -722 5611 5260 1317 181 0 99 chr5 177464312 177464654 -22165496 - AluJb SINE Alu 0 312 5 258 312 42 19 chr5 177464674 177464889 -22165261 - L1MC/D LINE L1 -978 5168 4949 205 269 19 0 chr5 177465377 177465429 -22164721 + MIR SINE MIR 191 243 -19 2385 68 0 3 chr5 177467625 177467935 -22162215 - AluY SINE Alu -2 309 1 256 360 29 15 chr5 177468034 177468170 -22161980 - L2 LINE L2 -6 3266 3129 3738 27 0 0 chr5 177469067 177469511 -22160639 + L1PA4 LINE L1 5712 6155 0 809 241 91 0 chr5 177469654 177469841 -22160309 - MER63A DNA MER1_type -6 204 1 320 304 93 55 chr5 177470189 177470438 -22159712 + MIR SINE MIR 1 261 -1 213 214 54 18 chr5 177470779 177470835 -22159315 + L2 LINE L2 3215 3272 0 240 301 0 103 chr5 177471156 177471302 -22158848 - MIR SINE MIR -70 192 62 313 308 16 76 chr5 177471431 177471616 -22158534 - MER5B DNA MER1_type 0 178 5 199 305 102 55 chr5 177472576 177472704 -22157446 - MIR SINE MIR -3 259 126 516 288 172 14 chr5 177472848 177472960 -22157190 + MIR SINE MIR 14 107 -155 207 69 0 0 chr5 177472960 177472989 -22157161 + (TAA)n Simple_repeat Simple_repeat 1 29 0 516 288 172 14 chr5 177472989 177473091 -22157059 + MIR SINE MIR 107 262 0 278 297 171 9 chr5 177473203 177473314 -22156836 - L2 LINE L2 -3 3269 3141 715 99 62 6 chr5 177473784 177473945 -22156205 + CT-rich Low_complexity Low_complexity 1 170 0 180 97 0 0 chr5 177473946 177473977 -22156173 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 1877 132 7 7 chr5 177473981 177474262 -22155888 - AluSq SINE Alu -32 281 1 269 248 143 28 chr5 177474497 177474642 -22155508 - MIR3 SINE MIR -6 202 33 312 313 133 0 chr5 177474870 177474998 -22155152 + MIR SINE MIR 117 261 -1 372 321 189 29 chr5 177475290 177475570 -22154580 + L2 LINE L2 2989 3313 0 2195 104 0 0 chr5 177476224 177476512 -22153638 - AluSx SINE Alu -24 288 1 211 286 51 41 chr5 177476736 177476834 -22153316 + MIR SINE MIR 92 190 -72 201 273 0 0 chr5 177478232 177478287 -22151863 + T-rich Low_complexity Low_complexity 1 55 0 347 267 50 8 chr5 177480907 177481027 -22149123 + L2 LINE L2 3185 3309 -4 21 57 0 0 chr5 177481998 177482033 -22148117 + AT_rich Low_complexity Low_complexity 1 35 0 227 304 101 0 chr5 177482372 177482441 -22147709 + MIR SINE MIR 14 89 -173 937 201 0 0 chr5 177482489 177482653 -22147497 - FRAM SINE Alu -14 162 1 250 192 8 0 chr5 177483485 177483543 -22146607 - MIR SINE MIR -103 105 45 362 274 11 0 chr5 177484145 177484240 -22145910 + MIR SINE MIR 104 199 -63 258 344 8 0 chr5 177485621 177485743 -22144407 - L1ME LINE L1 -295 5826 5704 242 323 32 16 chr5 177485750 177485874 -22144276 - L1ME LINE L1 -393 5728 5603 1047 296 136 13 chr5 177485876 177486022 -22144128 - LTR33 LTR ERVL -5 516 389 1858 206 81 8 chr5 177486022 177486493 -22143657 - MLT1D LTR MaLR 0 505 1 1047 296 136 13 chr5 177486493 177486802 -22143348 - LTR33 LTR ERVL -132 389 5 395 333 17 8 chr5 177487684 177487804 -22142346 - L2 LINE L2 -4 3268 3148 233 322 0 0 chr5 177488472 177488531 -22141619 + L2 LINE L2 3236 3294 -19 294 125 0 0 chr5 177488632 177488680 -22141470 + (TA)n Simple_repeat Simple_repeat 2 49 0 216 0 0 0 chr5 177488680 177488704 -22141446 + (TG)n Simple_repeat Simple_repeat 2 25 0 2436 181 7 0 chr5 177489014 177489435 -22140715 + MSTB LTR MaLR 3 426 0 6305 249 47 43 chr5 177490074 177490522 -22139628 + L1PA12 LINE L1 2 446 -7138 1895 228 30 75 chr5 177490522 177491163 -22138987 - LTR9 LTR ERV1 0 612 1 6305 249 47 43 chr5 177491163 177492567 -22137583 + L1PA12 LINE L1 446 2404 -5180 245 29 29 0 chr5 177492567 177492601 -22137549 + (CAA)n Simple_repeat Simple_repeat 2 36 0 6305 249 47 43 chr5 177492601 177493036 -22137114 + L1PA12 LINE L1 2404 2836 -4748 * 13684 176 11 15 chr5 177493035 177493887 -22136263 + L1PA12 LINE L1 3590 4444 -3140 2214 117 3 0 chr5 177493887 177494195 -22135955 + AluSc SINE Alu 1 309 0 13684 176 11 15 chr5 177494195 177495983 -22134167 + L1PA12 LINE L1 4444 6220 -1364 6032 105 19 9 chr5 177495985 177497493 -22132657 + L1PA11 LINE L1 4656 6173 -1 261 224 166 54 chr5 177497682 177497905 -22132245 + L1ME3A LINE L1 5083 5330 -816 549 274 71 58 chr5 177497923 177498419 -22131731 + L1ME3A LINE L1 5380 5881 -289 1185 255 78 9 chr5 177498441 177498774 -22131376 + MLT1A1 LTR MaLR 10 365 0 1247 193 37 19 chr5 177498805 177499075 -22131075 + AluJo SINE Alu 1 275 -37 305 224 112 87 chr5 177499129 177499290 -22130860 + L1ME3A LINE L1 6006 6170 0 1919 127 0 46 chr5 177499302 177499609 -22130541 + AluSx SINE Alu 1 293 -19 220 167 19 19 chr5 177500578 177500632 -22129518 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 461 0 0 0 chr5 177500864 177500917 -22129233 + L1PA6 LINE L1 6094 6146 -8 21 57 0 0 chr5 177500917 177500952 -22129198 + AT_rich Low_complexity Low_complexity 1 35 0 28 0 0 0 chr5 177500998 177501026 -22129124 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr5 177501192 177501213 -22128937 + (T)n Simple_repeat Simple_repeat 1 21 0 348 152 83 0 chr5 177501554 177501686 -22128464 + (TA)n Simple_repeat Simple_repeat 2 144 0 527 336 61 37 chr5 177501734 177502312 -22127838 - L2 LINE L2 -210 3062 2476 278 292 21 0 chr5 177502502 177502598 -22127552 + MIR SINE MIR 77 174 -88 704 324 115 47 chr5 177502727 177503412 -22126738 - L2 LINE L2 -1038 2276 1545 37 52 0 0 chr5 177503872 177503930 -22126220 + AT_rich Low_complexity Low_complexity 1 58 0 208 58 103 23 chr5 177503981 177504068 -22126082 + (TA)n Simple_repeat Simple_repeat 1 94 0 24 0 0 0 chr5 177504073 177504097 -22126053 + AT_rich Low_complexity Low_complexity 1 24 0 387 178 53 18 chr5 177504098 177504267 -22125883 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 405 329 60 44 chr5 177504760 177505076 -22125074 - L1MC/D LINE L1 -2232 5576 5256 21 36 0 0 chr5 177505304 177505332 -22124818 + AT_rich Low_complexity Low_complexity 1 28 0 2391 120 11 0 chr5 177505352 177505718 -22124432 - L1PB1 LINE L1 0 6151 5782 319 206 10 82 chr5 177505733 177505830 -22124320 + L1MC4 LINE L1 6614 6703 -1339 4320 176 11 31 chr5 177505834 177507354 -22122796 - L1PB1 LINE L1 -359 5792 4303 404 200 8 0 chr5 177507827 177507952 -22122198 + (TA)n Simple_repeat Simple_repeat 2 127 0 1983 53 0 0 chr5 177508004 177508251 -22121899 + L1PA5 LINE L1 5907 6153 -1 384 301 205 21 chr5 177508454 177508693 -22121457 - L1MEd LINE L1 -5783 336 54 273 57 0 0 chr5 177508979 177509014 -22121136 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 615 219 0 8 chr5 177509038 177509161 -22120989 + FLAM_A SINE Alu 1 122 -11 2228 158 8 0 chr5 177509367 177509728 -22120422 + THE1B LTR MaLR 1 364 0 1468 230 27 36 chr5 177509815 177510289 -22119861 - L1ME2 LINE L1 -1 6163 5694 558 241 0 0 chr5 177510299 177510415 -22119735 - FLAM_A SINE Alu -19 123 8 823 239 39 13 chr5 177510418 177510648 -22119502 - L1ME2 LINE L1 -477 5687 5452 789 263 44 41 chr5 177510734 177511072 -22119078 - L1ME2 LINE L1 -3318 2828 2490 11630 229 67 9 chr5 177511077 177511444 -22118706 - L1PB1 LINE L1 0 6867 6523 261 0 0 0 chr5 177511444 177511473 -22118677 + (TG)n Simple_repeat Simple_repeat 2 30 0 11630 229 67 9 chr5 177511473 177512541 -22117609 - L1PB1 LINE L1 -344 6523 5518 275 65 22 0 chr5 177512541 177512587 -22117563 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 11630 229 67 9 chr5 177512587 177517624 -22112526 - L1PB1 LINE L1 -1349 5518 19 22 35 0 0 chr5 177518671 177518700 -22111450 + AT_rich Low_complexity Low_complexity 1 29 0 1309 240 41 29 chr5 177518868 177519284 -22110866 - LTR52 LTR ERVL 0 421 1 1964 154 7 0 chr5 177519572 177519871 -22110279 - AluSx SINE Alu -11 301 1 248 284 75 0 chr5 177520183 177520250 -22109900 - MIR3 SINE MIR -22 186 115 314 342 40 7 chr5 177520841 177520990 -22109160 - MLT1L LTR MaLR -53 562 409 718 234 31 71 chr5 177521059 177521285 -22108865 - MER20 DNA MER1_type 0 219 3 254 242 0 91 chr5 177521506 177521605 -22108545 - MLT1J2 LTR MaLR -20 430 341 777 189 40 70 chr5 177521675 177521902 -22108248 - L1MD3 LINE L1 -8 7987 7768 329 364 65 0 chr5 177522403 177522557 -22107593 + MIR SINE MIR 86 249 -13 24 0 0 0 chr5 177522692 177522716 -22107434 + AT_rich Low_complexity Low_complexity 1 24 0 191 298 0 0 chr5 177524404 177524461 -22105689 + L2 LINE L2 3226 3282 -31 617 238 119 20 chr5 177524769 177525157 -22104993 - MLT1F1 LTR MaLR 0 567 71 650 206 8 0 chr5 177525200 177525326 -22104824 - FLAM_C SINE Alu -12 131 5 261 306 28 49 chr5 177525977 177526121 -22104029 - MIR SINE MIR -40 222 82 206 170 0 21 chr5 177526157 177526204 -22103946 + GA-rich Low_complexity Low_complexity 1 46 0 612 289 5 16 chr5 177526526 177526716 -22103434 - MER5A DNA MER1_type 0 189 2 287 214 18 0 chr5 177526845 177526901 -22103249 + MER94 DNA DNA 17 73 -61 200 222 0 0 chr5 177527031 177527076 -22103074 + (TA)n Simple_repeat Simple_repeat 2 46 0 330 87 0 0 chr5 177527076 177527122 -22103028 + (CA)n Simple_repeat Simple_repeat 2 47 0 1056 256 114 33 chr5 177527198 177527565 -22102585 + LTR16A LTR ERVL 54 450 0 1295 159 27 27 chr5 177527916 177528173 -22101977 - Tigger2 DNA MER2_type -10 2708 2452 4520 143 23 5 chr5 177528231 177528972 -22101178 - Tigger2 DNA MER2_type -1964 754 1 511 230 183 37 chr5 177529712 177529903 -22100247 - MER20 DNA MER1_type 0 219 1 314 283 217 30 chr5 177530019 177530249 -22099901 - L2 LINE L2 -6 3307 3035 24 32 0 0 chr5 177530621 177530652 -22099498 + AT_rich Low_complexity Low_complexity 1 31 0 2473 112 22 0 chr5 177530825 177531181 -22098969 - THE1B LTR MaLR 0 364 1 1855 159 63 0 chr5 177531452 177531785 -22098365 + L1MA9 LINE L1 5417 5770 -542 236 208 19 0 chr5 177531797 177531850 -22098300 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 225 244 22 44 chr5 177531852 177531942 -22098208 - L1MC4 LINE L1 -1341 6701 6614 183 42 0 0 chr5 177531944 177531968 -22098182 + (CA)n Simple_repeat Simple_repeat 2 25 0 2594 165 41 10 chr5 177531976 177532332 -22097818 + L1MA9 LINE L1 5789 6167 -145 252 59 0 0 chr5 177532332 177532366 -22097784 + (CA)n Simple_repeat Simple_repeat 1 34 0 2594 165 41 10 chr5 177532366 177532517 -22097633 + L1MA9 LINE L1 6167 6312 0 426 203 109 23 chr5 177533562 177533690 -22096460 - MIR SINE MIR -15 247 109 2359 201 40 88 chr5 177533796 177533967 -22096183 + MER82 DNA MER2_type 4 182 -471 1994 108 0 39 chr5 177533967 177534253 -22095897 - AluSq SINE Alu -38 275 1 2359 201 40 88 chr5 177534253 177534751 -22095399 + MER82 DNA MER2_type 182 641 -12 225 305 68 64 chr5 177535242 177535491 -22094659 - MLT1K LTR MaLR -92 496 247 760 232 185 44 chr5 177535902 177536242 -22093908 + LTR16C LTR ERVL 79 466 -25 32 0 0 0 chr5 177536932 177536964 -22093186 + AT_rich Low_complexity Low_complexity 1 32 0 1671 198 3 0 chr5 177537190 177537493 -22092657 + AluJo SINE Alu 1 304 -8 1224 212 55 4 chr5 177537596 177537709 -22092441 + AluJo SINE Alu 11 117 -195 198 0 0 0 chr5 177537709 177537731 -22092419 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1224 212 55 4 chr5 177537731 177537872 -22092278 + AluJo SINE Alu 117 278 -34 1960 148 3 10 chr5 177537971 177538274 -22091876 + AluSx SINE Alu 1 301 -11 349 286 93 57 chr5 177538445 177538725 -22091425 + L1MC/D LINE L1 5254 5543 -2265 232 294 46 20 chr5 177538796 177538949 -22091201 + L1MC/D LINE L1 5648 5804 -2004 1323 191 13 40 chr5 177539297 177539596 -22090554 + AluJo SINE Alu 13 303 -9 404 116 0 14 chr5 177539596 177539665 -22090485 + (GGGA)n Simple_repeat Simple_repeat 1 68 0 321 348 93 17 chr5 177540092 177540382 -22089768 - L1M4 LINE L1 -1191 4955 4644 232 296 110 37 chr5 177540391 177540521 -22089629 - MIR SINE MIR -64 144 25 26 0 0 0 chr5 177540806 177540832 -22089318 + AT_rich Low_complexity Low_complexity 1 26 0 873 246 53 74 chr5 177540835 177541323 -22088827 - L1MC4 LINE L1 -16 8026 7549 22 56 0 0 chr5 177541921 177541957 -22088193 + AT_rich Low_complexity Low_complexity 1 36 0 1709 234 60 41 chr5 177544082 177544569 -22085581 - MLT1D LTR MaLR -9 496 1 2293 92 7 0 chr5 177546527 177546819 -22083331 - AluSg SINE Alu -16 294 1 207 355 11 21 chr5 177547786 177547879 -22082271 + MIR SINE MIR 45 136 -126 1595 260 64 12 chr5 177548750 177549315 -22080835 + L1MC3 LINE L1 3775 4368 -1778 2100 211 50 8 chr5 177549351 177549867 -22080283 + L1MC3 LINE L1 5856 6393 -1392 1129 159 16 0 chr5 177549880 177550062 -22080088 - Tigger3(Golem) DNA MER2_type -2 3027 2843 757 336 65 16 chr5 177650278 177650662 -21979488 + L2 LINE L2 2911 3313 0 223 202 24 24 chr5 177650960 177651044 -21979106 + (CATA)n Simple_repeat Simple_repeat 3 86 0 2064 128 3 0 chr5 177651110 177651406 -21978744 + AluSp SINE Alu 1 297 -16 28 61 0 0 chr5 177651991 177652040 -21978110 + AT_rich Low_complexity Low_complexity 1 49 0 1388 165 35 95 chr5 177652049 177652168 -21977982 + L1MD1 LINE L1 5643 5768 -474 1863 152 14 0 chr5 177652168 177652458 -21977692 - AluSx SINE Alu -18 294 1 1388 165 35 95 chr5 177652458 177652708 -21977442 + L1MD1 LINE L1 5768 5990 -252 1425 142 0 17 chr5 177653763 177653996 -21976154 - AluSg/x SINE Alu 0 312 84 663 171 0 89 chr5 177654079 177654188 -21975962 + FLAM_A SINE Alu 1 95 -207 2088 131 3 7 chr5 177654188 177654493 -21975657 - AluSq SINE Alu -9 304 1 663 171 0 89 chr5 177654493 177654529 -21975621 + FLAM_A SINE Alu 95 133 -169 1001 148 76 0 chr5 177654668 177654878 -21975272 - L1MA5A LINE L1 0 6297 6072 311 264 0 24 chr5 177654884 177655009 -21975141 + (CAGTA)n Simple_repeat Simple_repeat 3 124 0 1218 116 17 0 chr5 177655109 177655282 -21974868 + AluSg/x SINE Alu 134 309 -1 515 280 133 45 chr5 177656342 177656696 -21973454 - HAL1 LINE L1 0 2507 2123 4314 80 71 13 chr5 177656698 177656755 -21973395 + PABL_A LTR ERV1 2 54 -606 1980 133 7 3 chr5 177656755 177657049 -21973101 - AluSx SINE Alu -17 295 1 4314 80 71 13 chr5 177657049 177657614 -21972536 + PABL_A LTR ERV1 54 660 0 611 324 84 0 chr5 177658312 177658537 -21971613 + MIR SINE MIR 11 254 -8 261 322 35 0 chr5 177658824 177658939 -21971211 + L1M4 LINE L1 2890 3008 -3138 1593 100 74 44 chr5 177659023 177659323 -21970827 - AluSg SINE Alu 0 313 6 1024 304 162 38 chr5 177659327 177660468 -21969682 + L1M4 LINE L1 3064 4346 -1800 637 187 81 0 chr5 177660480 177660603 -21969547 - FLAM_C SINE Alu 0 133 1 284 190 50 60 chr5 177660937 177661037 -21969113 + L1M4 LINE L1 4931 5029 -1117 3755 237 87 22 chr5 177661175 177662539 -21967611 + L1ME LINE L1 3754 5205 -941 1141 211 62 80 chr5 177662544 177662897 -21967253 + MER39 LTR ERV1 1 520 -187 2107 96 7 3 chr5 177662897 177663190 -21966960 - AluSg1 SINE Alu -15 294 1 1141 211 62 80 chr5 177663190 177663366 -21966784 + MER39 LTR ERV1 520 698 -9 2080 91 0 20 chr5 177663534 177663830 -21966320 + AluY SINE Alu 22 311 0 185 340 21 0 chr5 177664525 177664572 -21965578 - L2 LINE L2 -89 3183 3136 354 321 289 5 chr5 177664884 177665102 -21965048 - L3 LINE CR1 -5 1572 1293 181 250 23 0 chr5 177666025 177666069 -21964081 - MIR SINE MIR -121 141 97 21 57 0 0 chr5 177666283 177666318 -21963832 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr5 177666380 177666410 -21963740 + AT_rich Low_complexity Low_complexity 1 30 0 311 313 107 8 chr5 177666824 177666955 -21963195 + MIR SINE MIR 75 218 -44 285 258 169 0 chr5 177667872 177667961 -21962189 - HAL1 LINE L1 -153 2354 2251 238 323 0 40 chr5 177668487 177668586 -21961564 - HAL1 LINE L1 -583 1924 1830 339 245 118 0 chr5 177668657 177668759 -21961391 - HAL1 LINE L1 -834 1673 1560 327 217 14 0 chr5 177668774 177668843 -21961307 - HAL1 LINE L1 -997 1510 1441 368 268 72 13 chr5 177668846 177668999 -21961151 - HAL1 LINE L1 -1112 1395 1234 395 284 71 0 chr5 177669105 177669246 -21960904 + MIR SINE MIR 112 262 0 242 177 32 48 chr5 177669261 177669323 -21960827 - L2 LINE L2 0 3313 3253 777 270 63 42 chr5 177669824 177670292 -21959858 + L1ME LINE L1 5293 5772 -349 471 260 167 20 chr5 177670310 177670514 -21959636 + MIR SINE MIR 15 248 -14 287 244 77 39 chr5 177670567 177670645 -21959505 - L2 LINE L2 -37 3276 3196 367 340 173 6 chr5 177670713 177671069 -21959081 + L2 LINE L2 2644 3057 -215 2118 112 11 0 chr5 177671284 177671570 -21958580 - AluSc SINE Alu -20 289 1 402 221 0 0 chr5 177671605 177671682 -21958468 + AluJ/FLAM SINE Alu 2 78 -234 2207 211 8 35 chr5 177672982 177673504 -21956646 - MER34 LTR ERV1 -9 533 26 2294 141 19 0 chr5 177674159 177674527 -21955623 - THE1C LTR MaLR 0 375 1 675 239 17 0 chr5 177674531 177674707 -21955443 - THE1C-int LTR MaLR -4 1576 1398 21 0 0 0 chr5 177675270 177675291 -21954859 + AT_rich Low_complexity Low_complexity 1 21 0 1979 138 0 26 chr5 177676231 177676542 -21953608 + AluSx SINE Alu 9 311 -1 1044 83 0 8 chr5 177677726 177677858 -21952292 - AluSq/x SINE Alu -181 131 1 739 172 17 23 chr5 177678695 177678869 -21951281 - L1MD3 LINE L1 -2 7993 7821 243 265 169 18 chr5 177678998 177679217 -21950933 - L1M4 LINE L1 -1538 4608 4357 22 0 0 0 chr5 177679280 177679302 -21950848 + AT_rich Low_complexity Low_complexity 1 22 0 355 230 144 29 chr5 177679448 177679622 -21950528 - L1M4 LINE L1 -2093 4053 3860 286 267 75 0 chr5 177679664 177679784 -21950366 - L1M4 LINE L1 -2694 3452 3324 890 179 123 19 chr5 177680900 177681168 -21948982 + MER33 DNA MER1_type 1 296 -28 238 293 75 28 chr5 177682511 177682617 -21947533 - L3 LINE CR1 -196 1381 1271 402 359 196 7 chr5 177682726 177683135 -21947015 + L2 LINE L2 2271 2756 -558 2198 97 10 3 chr5 177684180 177684479 -21945671 + AluSp SINE Alu 1 301 -12 247 229 146 42 chr5 177684642 177684738 -21945412 + L2 LINE L2 2887 2992 -280 851 171 0 0 chr5 177684753 177684893 -21945257 + FLAM_C SINE Alu 1 140 -3 287 148 82 16 chr5 177686677 177686738 -21943412 + U3 snRNA snRNA 1 65 -152 1418 173 97 4 chr5 177687208 177687486 -21942664 - AluJb SINE Alu -6 306 3 9262 120 45 47 chr5 177687720 177688032 -21942118 - THE1C-int LTR MaLR -1 1579 1268 2057 146 0 0 chr5 177688032 177688327 -21941823 - AluSx SINE Alu -17 295 1 9262 120 45 47 chr5 177688327 177689596 -21940554 - THE1C-int LTR MaLR -312 1268 1 2020 132 52 19 chr5 177689596 177689959 -21940191 - THE1C LTR MaLR 0 375 1 348 275 6 75 chr5 177690088 177690248 -21939902 + MIR SINE MIR 114 262 0 21 0 0 0 chr5 177690302 177690323 -21939827 + AT_rich Low_complexity Low_complexity 1 21 0 306 361 24 18 chr5 177690540 177690709 -21939441 + L2 LINE L2 3133 3302 -11 23 0 0 0 chr5 177691564 177691587 -21938563 + AT_rich Low_complexity Low_complexity 1 23 0 189 147 0 0 chr5 177692485 177692519 -21937631 + (TC)n Simple_repeat Simple_repeat 2 35 0 701 316 93 34 chr5 177693327 177693801 -21936349 + MLT1K LTR MaLR 87 588 0 210 175 25 0 chr5 177695139 177695179 -21934971 + CT-rich Low_complexity Low_complexity 4 44 0 1397 172 62 52 chr5 177696043 177696257 -21933893 + AluJb SINE Alu 1 220 -92 2335 95 3 0 chr5 177696257 177696563 -21933587 + AluSp SINE Alu 1 307 -6 1397 172 62 52 chr5 177696563 177696638 -21933512 + AluJb SINE Alu 220 293 -19 549 168 71 35 chr5 177696651 177696764 -21933386 + FLAM_C SINE Alu 1 117 -26 2227 91 21 0 chr5 177696781 177697068 -21933082 + AluSc SINE Alu 1 293 -16 444 317 130 38 chr5 177698656 177699101 -21931049 - L2 LINE L2 -3 3310 2825 1786 133 0 11 chr5 177699377 177699648 -21930502 + AluSx SINE Alu 38 305 -7 313 329 89 17 chr5 177699729 177700088 -21930062 + L1 LINE L1 3547 3931 -2215 522 163 170 78 chr5 177700132 177700285 -21929865 - AluJb SINE Alu -18 294 128 21 0 0 0 chr5 177700716 177700737 -21929413 + AT_rich Low_complexity Low_complexity 1 21 0 270 182 0 0 chr5 177700912 177700956 -21929194 - MARNA DNA Mariner -94 492 449 310 283 102 18 chr5 177700965 177701131 -21929019 + MARNA DNA Mariner 168 347 -239 2523 211 97 36 chr5 177701208 177702191 -21927959 - L1ME3 LINE L1 -81 6876 5830 405 238 49 37 chr5 177702200 177702364 -21927786 - L1M4 LINE L1 -965 5181 5016 * 701 224 91 59 chr5 177702342 177702823 -21927327 - L1ME3 LINE L1 -4887 1536 1227 2362 95 0 0 chr5 177702870 177703165 -21926985 + AluY SINE Alu 2 296 -15 1247 145 127 67 chr5 177704212 177704343 -21925807 + AluJo SINE Alu 13 135 -177 2185 103 3 7 chr5 177704343 177704644 -21925506 + AluSg SINE Alu 1 300 -10 1247 145 127 67 chr5 177704644 177704795 -21925355 + AluJo SINE Alu 135 312 0 23 0 0 0 chr5 177705426 177705449 -21924701 + AT_rich Low_complexity Low_complexity 1 23 0 2148 101 0 0 chr5 177706550 177706827 -21923323 + AluSc SINE Alu 17 293 -16 715 235 55 6 chr5 177706986 177707674 -21922476 - L1ME1 LINE L1 -5 6161 5338 1021 196 13 40 chr5 177708169 177708394 -21921756 + MER20 DNA MER1_type 1 219 0 2022 111 14 10 chr5 177708505 177708794 -21921356 + AluSg SINE Alu 1 290 -20 2282 85 3 10 chr5 177709179 177709493 -21920657 - AluSp SINE Alu 0 313 1 545 157 0 0 chr5 177709600 177709683 -21920467 - AluJ/FLAM SINE Alu -226 86 4 346 159 111 0 chr5 177710101 177710164 -21919986 - FRAM/FAM SINE Alu -89 86 17 284 251 43 6 chr5 177710163 177710258 -21919892 - MLT1L LTR MaLR -305 267 110 * 227 100 0 0 chr5 177710232 177710262 -21919888 - LTR67 LTR ERVL -418 139 110 * 1516 137 140 17 chr5 177710265 177710372 -21919778 - MER44D DNA MER2_type -1882 609 517 1820 140 46 35 chr5 177710372 177710743 -21919407 + THE1C LTR MaLR 1 375 0 1516 137 140 17 chr5 177710743 177710935 -21919215 - MER44D DNA MER2_type -1974 517 3 1602 167 43 0 chr5 177710998 177711279 -21918871 + AluJb SINE Alu 1 293 -19 1412 218 73 39 chr5 177711369 177711682 -21918468 + MSTD LTR MaLR 1 331 -65 1457 119 14 9 chr5 177711682 177711900 -21918250 - AluSq SINE Alu -50 263 45 1412 218 73 39 chr5 177711900 177711967 -21918183 + MSTD LTR MaLR 331 394 -2 243 0 0 0 chr5 177712036 177712063 -21918087 + (T)n Simple_repeat Simple_repeat 1 27 0 590 133 11 0 chr5 177712113 177712203 -21917947 - AluJb SINE Alu -23 289 199 2290 102 0 0 chr5 177712306 177712610 -21917540 - AluSx SINE Alu -8 304 1 266 183 308 62 chr5 177712613 177712837 -21917313 - HAL1 LINE L1 -1436 1071 793 1924 146 3 10 chr5 177712847 177713142 -21917008 + AluJo SINE Alu 3 295 -17 597 148 0 20 chr5 177713159 177713260 -21916890 + AluJ/FLAM SINE Alu 1 99 -213 185 176 0 0 chr5 177713294 177713328 -21916822 + MER5B DNA MER1_type 1 34 -144 597 270 11 11 chr5 177713355 177713533 -21916617 + MER5B DNA MER1_type 1 178 0 443 200 148 30 chr5 177713567 177713702 -21916448 + MER5A DNA MER1_type 1 151 -38 2290 90 3 3 chr5 177713741 177714040 -21916110 - AluSx SINE Alu -13 299 1 1740 132 11 8 chr5 177714352 177714617 -21915533 - AluJb SINE Alu -25 287 22 2206 64 46 3 chr5 177714735 177715017 -21915133 + AluY SINE Alu 1 294 -17 506 223 45 9 chr5 177717081 177717193 -21912957 + L2 LINE L2 3182 3297 -16 588 234 128 35 chr5 177717214 177717399 -21912751 + L1ME3A LINE L1 5558 5769 -401 1537 163 81 11 chr5 177717399 177717682 -21912468 + AluJb SINE Alu 1 303 -9 588 234 128 35 chr5 177717682 177717722 -21912428 + L1ME3A LINE L1 5769 5804 -366 908 161 21 57 chr5 177717791 177717984 -21912166 + MER20 DNA MER1_type 34 219 0 619 255 71 68 chr5 177717990 177718284 -21911866 + L1ME3A LINE L1 5808 6102 -68 573 137 34 8 chr5 177718873 177719049 -21911101 + MER51A LTR ERV1 2 230 -404 252 109 22 22 chr5 177719051 177719097 -21911053 + MER51A LTR ERV1 179 224 -410 * 1092 118 83 29 chr5 177719094 177719298 -21910852 + MER51A LTR ERV1 420 634 0 342 138 149 11 chr5 177719353 177719447 -21910703 + MER113 DNA MER1_type? 64 170 -351 280 222 25 37 chr5 177719733 177719814 -21910336 + MER113 DNA MER1_type? 405 484 -37 2167 105 7 0 chr5 177720678 177720973 -21909177 + AluSg SINE Alu 1 297 -13 5341 116 46 54 chr5 177721019 177721252 -21908898 + Tigger1 DNA MER2_type 1 235 -2183 2039 87 25 4 chr5 177721252 177721528 -21908622 + AluSc SINE Alu 1 282 -27 5341 116 46 54 chr5 177721528 177722323 -21907827 + Tigger1 DNA MER2_type 235 1020 -1398 979 166 96 13 chr5 177722491 177722720 -21907430 + L1M4c LINE L1 522 769 -5615 3356 118 23 74 chr5 177722868 177723596 -21906554 + L1M4c LINE L1 771 1461 -4923 579 237 216 42 chr5 177723744 177723962 -21906188 - MLT1G1 LTR MaLR 0 595 300 1622 158 140 28 chr5 177724016 177724416 -21905734 + MER31B LTR ERV1 1 445 -21 543 240 40 10 chr5 177724426 177724616 -21905534 - MLT1G1 LTR MaLR -372 183 3 2187 115 0 3 chr5 177725089 177725385 -21904765 - AluSc SINE Alu -14 295 1 912 143 0 0 chr5 177725718 177725844 -21904306 - AluY SINE Alu -185 126 1 1315 164 133 0 chr5 177728759 177729022 -21901128 - AluSx SINE Alu -2 300 3 333 141 14 42 chr5 177729022 177729093 -21901057 - THE1B LTR MaLR 0 364 296 1425 95 67 40 chr5 177729182 177729435 -21900715 - THE1B LTR MaLR -104 260 1 516 293 44 0 chr5 177729695 177729965 -21900185 + L1MC/D LINE L1 5005 5286 -860 1400 190 4 16 chr5 177730564 177730817 -21899333 + AluJo SINE Alu 2 251 -61 329 218 51 61 chr5 177730864 177731082 -21899068 + L1MC/D LINE L1 5291 5507 -719 1442 156 0 4 chr5 177731114 177731345 -21898805 - AluSg/x SINE Alu -1 309 80 1441 238 108 14 chr5 177732160 177732667 -21897483 - MLT1F1 LTR MaLR -3 564 5 460 374 98 38 chr5 177732929 177733247 -21896903 + L2 LINE L2 2925 3261 -11 286 234 0 0 chr5 177733584 177733661 -21896489 - L1ME1 LINE L1 -4 6162 6086 848 173 0 0 chr5 177734050 177734183 -21895967 + FLAM_A SINE Alu 1 133 0 355 328 33 25 chr5 177734429 177734551 -21895599 - L2 LINE L2 0 3313 3191 192 341 176 50 chr5 177734614 177735212 -21894938 + L2 LINE L2 2166 2838 -476 2089 104 7 17 chr5 177736188 177736486 -21893664 + AluSg SINE Alu 2 296 -14 1878 149 10 0 chr5 177736656 177736958 -21893192 + AluJb SINE Alu 1 305 -7 23 0 0 0 chr5 177737214 177737237 -21892913 + AT_rich Low_complexity Low_complexity 1 23 0 653 172 7 35 chr5 177737442 177737587 -21892563 + MER46A DNA MER2_type 11 151 -85 444 291 93 4 chr5 177737712 177737970 -21892180 + L1ME LINE L1 3942 4222 -1924 295 290 25 12 chr5 177738048 177738210 -21891940 + L1ME LINE L1 4352 4515 -1631 768 239 137 5 chr5 177738236 177738433 -21891717 - MIR SINE MIR -24 238 16 357 246 134 35 chr5 177738433 177738717 -21891433 + L1ME LINE L1 4533 4844 -1302 345 255 19 9 chr5 177738805 177738911 -21891239 + (TA)n Simple_repeat Simple_repeat 2 108 0 480 316 104 27 chr5 177739132 177739506 -21890644 + L1ME LINE L1 5257 5659 -511 693 157 81 103 chr5 177739508 177739638 -21890512 + MER58A DNA MER1_type 6 130 -2290 2177 137 0 3 chr5 177739638 177739951 -21890199 + AluSx SINE Alu 1 312 0 693 157 81 103 chr5 177739951 177740043 -21890107 + MER58A DNA MER1_type 130 223 -1 794 209 43 0 chr5 177740575 177740738 -21889412 + FAM SINE Alu 3 172 -3 492 331 77 18 chr5 177740922 177741260 -21888890 - L1M4 LINE L1 -1077 5069 4712 372 318 87 51 chr5 177741383 177741694 -21888456 - L1M4 LINE L1 -1726 4420 4099 819 131 8 0 chr5 177742494 177742624 -21887526 + FLAM_C SINE Alu 3 133 0 1296 157 26 4 chr5 177743482 177743712 -21886438 - MER46A DNA MER2_type 0 236 2 1173 190 20 5 chr5 177744114 177744309 -21885841 + AluJo SINE Alu 1 198 -114 213 65 0 0 chr5 177744349 177744380 -21885770 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 617 195 79 69 chr5 177744525 177744843 -21885307 + L1MC5 LINE L1 7609 7929 -32 2231 100 3 7 chr5 177744976 177745286 -21884864 - AluSg SINE Alu -1 309 1 1733 123 89 11 chr5 177745299 177745568 -21884582 - AluSq SINE Alu -23 290 1 21 0 0 0 chr5 177745721 177745742 -21884408 + AT_rich Low_complexity Low_complexity 1 21 0 323 174 0 204 chr5 177746038 177746170 -21883980 - MIR3 SINE MIR -12 196 92 * 1097 289 177 60 chr5 177746123 177746724 -21883426 - L2 LINE L2 -1829 1485 737 2288 123 7 0 chr5 177746724 177747033 -21883117 + AluSx SINE Alu 1 311 -1 1097 289 177 60 chr5 177747033 177747359 -21882791 - L2 LINE L2 -2577 737 450 1128 84 79 44 chr5 177747367 177747570 -21882580 + MER30 DNA MER1_type 1 210 -20 513 320 66 22 chr5 177747597 177747778 -21882372 - L2 LINE L2 -2851 463 275 3935 140 62 99 chr5 177747876 177748793 -21881357 - MER21A LTR ERV1 0 931 49 1687 161 57 4 chr5 177748793 177749072 -21881078 + AluJb SINE Alu 5 298 -14 3935 140 62 99 chr5 177749072 177749106 -21881044 - MER21A LTR ERV1 -882 49 15 243 318 269 14 chr5 177749783 177750006 -21880144 - L2 LINE L2 -1 3271 2992 * 246 352 69 84 chr5 177750004 177750456 -21879694 - L2 LINE L2 -1 3271 2827 716 169 73 7 chr5 177750571 177750731 -21879419 - AluSg/x SINE Alu 0 306 138 1292 126 63 25 chr5 177751059 177751298 -21878852 + MER1B DNA MER1_type 128 335 -4 22 35 0 0 chr5 177751351 177751380 -21878770 + AT_rich Low_complexity Low_complexity 1 29 0 2310 100 0 6 chr5 177751593 177751904 -21878246 + AluSg SINE Alu 1 309 -1 22 35 0 0 chr5 177752014 177752043 -21878107 + AT_rich Low_complexity Low_complexity 1 29 0 1220 279 105 58 chr5 177752477 177753277 -21876873 + HAL1 LINE L1 21 858 -1649 309 204 87 10 chr5 177753282 177753385 -21876765 + HAL1 LINE L1 1202 1312 -1195 1425 98 127 0 chr5 177753500 177753705 -21876445 + AluSg/x SINE Alu 73 303 -9 656 333 78 52 chr5 177753792 177754699 -21875451 + L2 LINE L2 2376 3305 -8 23 54 0 0 chr5 177755032 177755069 -21875081 + AT_rich Low_complexity Low_complexity 1 37 0 36 23 0 0 chr5 177755885 177755928 -21874222 + AT_rich Low_complexity Low_complexity 1 43 0 1805 139 36 3 chr5 177756126 177756428 -21873722 - AluSx SINE Alu 0 312 1 234 249 55 39 chr5 177756466 177756647 -21873503 - L1M4 LINE L1 -2744 3900 3717 809 244 5 9 chr5 177756650 177756863 -21873287 - L1M4 LINE L1 -5781 761 550 1715 133 47 36 chr5 177756872 177757173 -21872977 - AluSx SINE Alu -1 311 8 2117 115 13 13 chr5 177757180 177757484 -21872666 - AluSx SINE Alu -8 304 1 1947 136 3 10 chr5 177758511 177758813 -21871337 - AluSx SINE Alu -12 300 1 2226 102 0 34 chr5 177758952 177759274 -21870876 - AluSx SINE Alu -1 311 1 196 346 13 13 chr5 177765764 177765842 -21864308 - MIR3 SINE MIR -126 82 5 817 198 49 12 chr5 177766485 177766647 -21863503 - MER5A DNA MER1_type -21 168 1 213 39 0 0 chr5 177767151 177767177 -21862973 + (A)n Simple_repeat Simple_repeat 1 26 0 209 293 10 61 chr5 177767190 177767289 -21862861 - MER5A DNA MER1_type -84 105 12 259 233 203 0 chr5 177767333 177767466 -21862684 + HAL1 LINE L1 2142 2301 -206 408 223 204 0 chr5 177767623 177767726 -21862424 + FLAM_A SINE Alu 1 124 -9 2226 99 0 14 chr5 177767726 177768020 -21862130 - AluSx SINE Alu -22 290 1 571 193 0 53 chr5 177768020 177768134 -21862016 - MIR SINE MIR -112 150 43 3202 202 80 20 chr5 177768385 177769228 -21860922 - L1MB8 LINE L1 -12 6166 5274 24 0 0 0 chr5 177770161 177770185 -21859965 + AT_rich Low_complexity Low_complexity 1 24 0 1220 282 63 21 chr5 177770728 177771249 -21858901 - HAL1 LINE L1 -354 2153 1611 1504 257 65 97 chr5 177771270 177771616 -21858534 + MER21B LTR ERV1 3 359 -504 2236 103 0 3 chr5 177771616 177771917 -21858233 + AluSg SINE Alu 1 300 -10 1504 257 65 97 chr5 177771917 177772322 -21857828 + MER21B LTR ERV1 359 730 -133 460 276 29 52 chr5 177772332 177772506 -21857644 + MER21B LTR ERV1 570 739 -124 1662 138 51 0 chr5 177772562 177772816 -21857334 + AluSx SINE Alu 1 267 -45 2307 98 3 0 chr5 177773881 177774187 -21855963 - AluSp SINE Alu -6 307 1 858 118 0 8 chr5 177774200 177774319 -21855831 - FLAM_C SINE Alu -25 118 1 2128 101 0 4 chr5 177774382 177774658 -21855492 + AluSx SINE Alu 1 275 -37 469 319 98 23 chr5 177775547 177775813 -21854337 + LTR67 LTR ERVL 2 287 -270 206 241 0 0 chr5 177776174 177776228 -21853922 + T-rich Low_complexity Low_complexity 1 54 0 1956 95 0 15 chr5 177776230 177776503 -21853647 - AluSc SINE Alu -40 269 1 345 137 0 0 chr5 177776691 177776742 -21853408 - AluJo SINE Alu -13 289 239 629 148 79 0 chr5 177776744 177776845 -21853305 - AluJo SINE Alu -112 200 92 1043 162 50 31 chr5 177776851 177777073 -21853077 - AluJo SINE Alu -11 301 76 712 172 15 22 chr5 177777880 177778014 -21852136 - FLAM_C SINE Alu -10 133 1 306 0 0 0 chr5 177778165 177778199 -21851951 + (TG)n Simple_repeat Simple_repeat 2 35 0 729 282 17 30 chr5 177778407 177778641 -21851509 + MIR SINE MIR 6 236 -26 261 318 61 30 chr5 177778670 177778802 -21851348 + MIR3 SINE MIR 72 207 -1 24 53 0 0 chr5 177779932 177779970 -21850180 + AT_rich Low_complexity Low_complexity 1 38 0 928 168 133 15 chr5 177780223 177780419 -21849731 + MER20 DNA MER1_type 1 219 0 538 246 67 56 chr5 177780508 177780687 -21849463 + MIR SINE MIR 48 228 -34 255 316 140 9 chr5 177780857 177780971 -21849179 + MIR SINE MIR 103 231 -31 2255 112 0 3 chr5 177781224 177781536 -21848614 + AluSx SINE Alu 1 311 -1 2289 112 3 0 chr5 177781577 177781882 -21848268 - AluSq SINE Alu -7 306 1 1598 148 8 0 chr5 177782495 177782738 -21847412 - AluSx SINE Alu -67 245 1 2437 74 0 0 chr5 177784913 177785223 -21844927 - AluY SINE Alu -1 310 1 542 344 26 0 chr5 177787389 177787584 -21842566 - MIR SINE MIR -14 248 49 1942 142 49 25 chr5 177787654 177788020 -21842130 + THE1C LTR MaLR 1 375 0 2498 130 85 11 chr5 177788469 177788914 -21841236 + MER9 LTR ERVK 34 511 0 30 0 0 0 chr5 177788972 177789002 -21841148 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 177789242 177789264 -21840886 + AT_rich Low_complexity Low_complexity 1 22 0 1040 204 25 4 chr5 177789507 177789752 -21840398 + L1MD1 LINE L1 5993 6242 0 2543 53 0 0 chr5 177789766 177790066 -21840084 + AluY SINE Alu 1 300 -11 397 340 65 16 chr5 177790529 177790714 -21839436 + MIR SINE MIR 50 243 -19 2051 139 0 7 chr5 177790947 177791249 -21838901 + AluSx SINE Alu 6 305 -7 256 271 0 0 chr5 177791540 177791610 -21838540 - MIR SINE MIR -3 259 190 56 48 0 0 chr5 177791626 177791710 -21838440 + AT_rich Low_complexity Low_complexity 1 84 0 21 0 0 0 chr5 177791923 177791944 -21838206 + AT_rich Low_complexity Low_complexity 1 21 0 2967 158 46 87 chr5 177792766 177793487 -21836663 + LTR8 LTR ERV1 1 691 0 2188 104 6 25 chr5 177793857 177794173 -21835977 - AluSq SINE Alu -1 312 3 2013 121 7 27 chr5 177794370 177794668 -21835482 - AluSx SINE Alu -20 292 1 789 192 87 17 chr5 177794953 177795125 -21835025 + AluJb SINE Alu 90 273 -39 34 42 0 0 chr5 177795125 177795173 -21834977 + AT_rich Low_complexity Low_complexity 1 48 0 351 204 149 33 chr5 177795187 177795368 -21834782 + L1ME4a LINE L1 5908 6109 -12 440 297 163 33 chr5 177796029 177796546 -21833604 + L2 LINE L2 2722 3302 -11 1140 189 26 108 chr5 177796709 177797010 -21833140 - AluJb SINE Alu 0 326 52 2285 116 3 0 chr5 177797010 177797311 -21832839 + AluSx SINE Alu 1 302 -10 1140 189 26 108 chr5 177797311 177797360 -21832790 - AluJb SINE Alu -274 52 1 26 30 0 0 chr5 177797556 177797589 -21832561 + AT_rich Low_complexity Low_complexity 1 33 0 675 228 50 70 chr5 177797911 177798031 -21832119 - L1MC5 LINE L1 -162 7799 7678 2199 120 0 7 chr5 177798031 177798340 -21831810 + AluSx SINE Alu 1 307 -5 675 228 50 70 chr5 177798340 177798578 -21831572 - L1MC5 LINE L1 -283 7678 7448 1116 162 194 12 chr5 177798614 177798867 -21831283 - AluJo SINE Alu -2 300 2 494 209 9 0 chr5 177798872 177798977 -21831173 - L1MC5 LINE L1 -514 7447 7342 447 294 227 52 chr5 177798986 177799230 -21830920 - L2 LINE L2 -771 2543 2343 1615 160 44 34 chr5 177799230 177799523 -21830627 + AluJb SINE Alu 3 298 -14 447 294 227 52 chr5 177799523 177799879 -21830271 - L2 LINE L2 -971 2343 2051 2155 91 14 3 chr5 177799879 177800165 -21829985 + AluSc SINE Alu 1 289 -20 447 294 227 52 chr5 177800165 177800553 -21829597 - L2 LINE L2 -1263 2051 1381 390 293 50 0 chr5 177800670 177800810 -21829340 + LTR37B LTR ERV1 322 468 0 934 232 143 27 chr5 177800954 177801282 -21828868 + L1ME3A LINE L1 5797 6162 -8 28 29 0 0 chr5 177801760 177801795 -21828355 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 177803389 177803412 -21826738 + AT_rich Low_complexity Low_complexity 1 23 0 324 0 0 0 chr5 177803915 177803951 -21826199 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 190 269 58 0 chr5 177804101 177804153 -21825997 + L2 LINE L2 2183 2237 -1077 763 230 56 0 chr5 177804712 177804890 -21825260 - MER5A DNA MER1_type -1 188 1 634 204 0 15 chr5 177805211 177805348 -21824802 - FLAM_C SINE Alu -2 141 7 1751 164 4 4 chr5 177805375 177805649 -21824501 - AluJo SINE Alu -28 284 11 903 134 41 21 chr5 177806015 177806209 -21823941 - L1MA7 LINE L1 -1 6290 6093 522 152 0 30 chr5 177806209 177806308 -21823842 + L1MA7 LINE L1 6009 6104 -187 239 98 196 0 chr5 177807414 177807465 -21822685 - MER30 DNA MER1_type -169 61 1 522 301 49 63 chr5 177808131 177808603 -21821547 - L2 LINE L2 -39 3274 2737 558 151 71 63 chr5 177808606 177808732 -21821418 - MLT1E2 LTR MaLR -445 181 55 262 267 0 78 chr5 177809167 177809257 -21820893 - L2 LINE L2 0 3313 3231 229 325 123 12 chr5 177809366 177809529 -21820621 + MIR SINE MIR 49 229 -33 356 164 104 142 chr5 177809535 177809718 -21820432 + MER69 DNA AcHobo 2 2526 0 428 299 175 11 chr5 177809892 177810223 -21819927 - L1ME4a LINE L1 -123 5998 5606 1448 196 128 6 chr5 177810223 177810576 -21819574 - MSTD LTR MaLR 0 396 1 428 299 175 11 chr5 177810576 177810592 -21819558 - L1ME4a LINE L1 -515 5606 5594 1985 127 0 0 chr5 177810707 177811011 -21819139 - AluSx SINE Alu 0 310 7 413 335 26 20 chr5 177811889 177812041 -21818109 - MIR SINE MIR -76 186 34 1952 198 23 73 chr5 177812179 177812710 -21817440 + MLT1D LTR MaLR 1 504 -1 747 228 0 0 chr5 177813010 177813159 -21816991 + FRAM SINE Alu 6 154 -22 222 216 39 0 chr5 177813163 177813214 -21816936 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 838 131 15 0 chr5 177813753 177813883 -21816267 - AluSc SINE Alu -15 294 163 1721 158 14 7 chr5 177814150 177814434 -21815716 - AluJb SINE Alu -26 286 1 216 97 0 0 chr5 177814453 177814484 -21815666 + (TA)n Simple_repeat Simple_repeat 1 31 0 21 57 0 0 chr5 177814609 177814644 -21815506 + AT_rich Low_complexity Low_complexity 1 35 0 237 266 75 21 chr5 177815382 177815476 -21814674 - L1ME4a LINE L1 -71 6050 5952 515 314 47 12 chr5 177817592 177817764 -21812386 - MER5B DNA MER1_type 0 178 1 229 280 13 13 chr5 177817795 177817870 -21812280 - L3 LINE CR1 -26 1551 1477 207 203 0 0 chr5 177818056 177818125 -21812025 + (TA)n Simple_repeat Simple_repeat 1 69 0 301 261 22 22 chr5 177818138 177818181 -21811969 - L1MC4 LINE L1 -1339 6703 6661 2097 108 54 38 chr5 177818181 177818550 -21811600 - THE1C LTR MaLR 0 375 1 301 261 22 22 chr5 177818550 177818598 -21811552 - L1MC4 LINE L1 -1380 6662 6612 291 93 0 0 chr5 177818604 177818647 -21811503 + (TG)n Simple_repeat Simple_repeat 2 44 0 22 35 0 0 chr5 177818846 177818875 -21811275 + AT_rich Low_complexity Low_complexity 1 29 0 208 284 62 12 chr5 177818978 177819059 -21811091 - L3 LINE CR1 -263 1314 1230 28 29 0 0 chr5 177819207 177819242 -21810908 + AT_rich Low_complexity Low_complexity 1 35 0 1577 197 14 0 chr5 177819261 177819545 -21810605 + AluJb SINE Alu 4 291 -21 231 114 0 0 chr5 177819545 177819580 -21810570 + (GGGA)n Simple_repeat Simple_repeat 1 35 0 31 0 0 0 chr5 177819581 177819612 -21810538 + AT_rich Low_complexity Low_complexity 1 31 0 465 279 99 17 chr5 177819831 177820003 -21810147 - L3 LINE CR1 -406 1171 986 284 292 21 62 chr5 177820042 177820186 -21809964 - L2 LINE L2 -191 3081 2944 274 340 118 49 chr5 177821745 177821889 -21808261 - L2 LINE L2 0 3272 3119 270 303 15 0 chr5 177822035 177822101 -21808049 - L2 LINE L2 -8 3264 3198 261 365 70 0 chr5 177822231 177822346 -21807804 - L2 LINE L2 0 3272 3150 974 212 37 28 chr5 177822348 177822565 -21807585 + MER20 DNA MER1_type 1 219 0 1834 154 3 3 chr5 177822886 177823179 -21806971 + AluJo SINE Alu 1 293 -19 283 299 98 49 chr5 177823398 177823562 -21806588 - MIR SINE MIR -89 173 2 526 254 207 9 chr5 177824070 177824283 -21805867 + MIR SINE MIR 4 258 -4 2299 228 14 32 chr5 177824306 177824928 -21805222 + MER90 LTR ERV1 1 611 -3 245 29 29 0 chr5 177824929 177824963 -21805187 + (CAT)n Simple_repeat Simple_repeat 1 35 0 2227 102 0 3 chr5 177825536 177825830 -21804320 + AluSx SINE Alu 1 293 -19 218 420 11 28 chr5 177827519 177827695 -21802455 + GA-rich Low_complexity Low_complexity 1 173 0 1414 177 86 73 chr5 177828094 177828479 -21801671 + MLT1B LTR MaLR 1 390 0 2002 128 0 3 chr5 177829025 177829313 -21800837 + AluSq SINE Alu 14 300 -13 1605 233 42 131 chr5 177929967 177930779 -21699371 - L1MDa LINE L1 -5762 778 39 313 267 78 6 chr5 177930800 177930980 -21699170 - L1M4 LINE L1 -3367 2779 2587 218 136 23 0 chr5 177931859 177931903 -21698247 + CT-rich Low_complexity Low_complexity 2 46 0 728 261 97 16 chr5 177931939 177932210 -21697940 + MLT1F1 LTR MaLR 235 567 0 2350 152 56 10 chr5 177933879 177934288 -21695862 - MSTA LTR MaLR 0 428 1 1233 220 59 42 chr5 177934459 177934930 -21695220 + MER66A LTR ERV1 104 478 0 313 263 291 16 chr5 177934988 177935235 -21694915 - MER5C DNA MER1_type -6 318 4 22 35 0 0 chr5 177935855 177935884 -21694266 + AT_rich Low_complexity Low_complexity 1 29 0 1851 127 37 16 chr5 177936350 177936672 -21693478 + L1PA16 LINE L1 5838 6166 0 297 348 0 19 chr5 177938059 177938220 -21691930 + A-rich Low_complexity Low_complexity 4 161 0 393 258 117 0 chr5 177938249 177938369 -21691781 + L1MEc LINE L1 513 646 -5750 * 1856 277 89 35 chr5 177938349 177938381 -21691769 + L1MEc LINE L1 1080 1109 -5106 1497 204 0 22 chr5 177938381 177938655 -21691495 + AluJo SINE Alu 1 268 -44 1856 277 89 35 chr5 177938655 177939869 -21690281 + L1MEc LINE L1 1109 2391 -3824 2203 132 0 0 chr5 177939869 177940179 -21689971 + AluSx SINE Alu 3 312 0 1856 277 89 35 chr5 177940179 177940487 -21689663 + L1MEc LINE L1 2391 2681 -3534 1989 150 10 0 chr5 177940754 177941048 -21689102 + AluSx SINE Alu 2 298 -14 4836 148 72 19 chr5 177941180 177942035 -21688115 + MER70A-int LTR ERVL 4123 5023 0 653 212 22 15 chr5 177942040 177942147 -21688003 + MER70A LTR ERVL 1 108 -364 257 231 0 0 chr5 177942147 177942199 -21687951 + LTR30 LTR ERV1 1 52 -670 305 122 0 0 chr5 177942199 177942240 -21687910 + LTR12 LTR ERV1 53 93 -621 3404 108 2 78 chr5 177942240 177942805 -21687345 + LTR12 LTR ERV1 55 576 -138 2228 175 8 16 chr5 177942805 177943182 -21686968 + MER70A LTR ERVL 99 472 0 307 323 16 47 chr5 177943733 177943860 -21686290 + L2 LINE L2 3191 3313 0 365 190 15 15 chr5 177945518 177945655 -21684495 + (TA)n Simple_repeat Simple_repeat 2 138 0 312 27 0 0 chr5 177946131 177946168 -21683982 + (ATG)n Simple_repeat Simple_repeat 2 38 0 1479 169 106 0 chr5 177946169 177946423 -21683727 - AluJb SINE Alu -31 281 1 7403 32 0 0 chr5 177946532 177947590 -21682560 - L1PA4 LINE L1 0 6155 5107 627 53 0 0 chr5 177947590 177947665 -21682485 + U6 snRNA snRNA 33 107 0 13651 26 2 0 chr5 177947665 177949300 -21680850 + L1P LINE L1 3468 5106 -1040 477 279 36 24 chr5 177949411 177949576 -21680574 + MLT1I LTR MaLR 241 407 -2 1554 191 25 0 chr5 177949591 177949904 -21680246 - AluJo SINE Alu 0 320 1 1182 324 78 11 chr5 177950562 177951352 -21678798 + L2 LINE L2 2461 3309 -4 425 338 26 20 chr5 177952003 177952154 -21677996 + MIR SINE MIR 48 199 -63 1998 128 28 0 chr5 177952431 177952720 -21677430 + AluSx SINE Alu 1 297 -15 251 363 0 11 chr5 177952784 177952875 -21677275 + MIR SINE MIR 13 102 -160 792 32 0 0 chr5 177952893 177952988 -21677162 + (TTATA)n Simple_repeat Simple_repeat 5 99 0 355 343 66 22 chr5 177953092 177953273 -21676877 - MIR SINE MIR -10 252 64 31 48 0 16 chr5 177953604 177953618 -21676532 + AT_rich Low_complexity Low_complexity 1 14 -48 1895 148 0 0 chr5 177953618 177953909 -21676241 - AluSx SINE Alu -21 291 1 31 48 0 16 chr5 177953909 177953957 -21676193 + AT_rich Low_complexity Low_complexity 14 62 0 425 241 131 7 chr5 177954015 177954160 -21675990 - MER3 DNA MER1_type -45 164 2 809 367 59 17 chr5 177954174 177954728 -21675422 + L2 LINE L2 2742 3313 0 361 227 41 52 chr5 177954736 177954833 -21675317 - MIR SINE MIR -123 139 44 218 179 18 0 chr5 177955955 177956011 -21674139 + T-rich Low_complexity Low_complexity 2 58 0 237 316 70 18 chr5 177956502 177956616 -21673534 - MIR SINE MIR -90 172 53 21 36 0 0 chr5 177956937 177956965 -21673185 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 177957272 177957293 -21672857 + AT_rich Low_complexity Low_complexity 1 21 0 303 28 0 0 chr5 177958460 177958496 -21671654 + (TC)n Simple_repeat Simple_repeat 2 37 0 249 235 0 0 chr5 177959449 177959500 -21670650 - Charlie8 DNA MER1_type -1000 1417 1367 261 305 53 11 chr5 177959881 177959976 -21670174 - L2 LINE L2 -234 3038 2940 467 299 101 10 chr5 177960123 177960330 -21669820 + MIR SINE MIR 37 262 0 274 302 107 24 chr5 177962021 177962190 -21667960 + LTR67 LTR ERVL 375 557 0 1806 146 0 4 chr5 177962307 177962588 -21667562 + LOR1a LTR ERV1 1 280 -217 398 306 69 0 chr5 177962608 177962752 -21667398 - MER103 DNA DNA -3 163 10 277 300 154 0 chr5 177962944 177963074 -21667076 + MIR SINE MIR 84 233 -29 460 298 8 8 chr5 177963091 177963212 -21666938 - LTR28 LTR ERV1 0 1020 900 1868 219 78 89 chr5 177963291 177964044 -21666106 - LTR1B LTR ERV1 -81 745 1 33 43 0 0 chr5 177964044 177964091 -21666059 + AT_rich Low_complexity Low_complexity 1 47 0 197 312 11 75 chr5 177964207 177964300 -21665850 + L2 LINE L2 3136 3222 -50 338 174 28 110 chr5 177965087 177965196 -21664954 - MLT1I LTR MaLR -6 403 304 456 293 120 80 chr5 177965433 177965907 -21664243 + L2 LINE L2 2821 3313 0 231 316 35 44 chr5 177965909 177966023 -21664127 - MIR SINE MIR -130 132 20 596 310 43 5 chr5 177966769 177966953 -21663197 + MIR SINE MIR 33 223 -39 516 315 18 6 chr5 177967237 177967402 -21662748 - MIR SINE MIR -6 256 90 24 0 0 0 chr5 177968720 177968744 -21661406 + AT_rich Low_complexity Low_complexity 1 24 0 213 39 0 0 chr5 177968765 177968791 -21661359 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 217 296 28 63 chr5 177968912 177969024 -21661126 + MIR SINE MIR 42 148 -74 354 331 68 14 chr5 177969177 177969325 -21660825 + MIR SINE MIR 31 186 -76 7274 27 1 0 chr5 177969593 177970450 -21659700 - L1PA3 LINE L1 -1 6154 5297 8920 23 0 2 chr5 177970550 177971608 -21658542 - L1PA3 LINE L1 -854 5292 4237 308 236 27 9 chr5 177971671 177971781 -21658369 + (TA)n Simple_repeat Simple_repeat 2 113 0 465 353 82 42 chr5 177972248 177972554 -21657596 + L2 LINE L2 2936 3253 -19 412 82 68 0 chr5 177973213 177973286 -21656864 - LTR54 LTR ERV1 -30 480 403 30 0 0 0 chr5 177973495 177973525 -21656625 + AT_rich Low_complexity Low_complexity 1 30 0 533 279 130 60 chr5 177974097 177974502 -21655648 + MLT1J2 LTR MaLR 11 448 -2 2261 103 7 0 chr5 177974714 177975014 -21655136 + AluSx SINE Alu 3 304 -8 268 224 0 17 chr5 177976557 177976615 -21653535 - MIR SINE MIR -111 151 95 258 344 117 48 chr5 177976780 177977010 -21653140 + MLT1K LTR MaLR 205 450 -138 478 232 14 36 chr5 177977868 177978006 -21652144 + MLT1F1 LTR MaLR 425 559 -8 29 70 0 0 chr5 177978010 177978067 -21652083 + AT_rich Low_complexity Low_complexity 1 57 0 203 296 0 0 chr5 177978078 177978132 -21652018 + (CA)n Simple_repeat Simple_repeat 1 54 0 256 273 117 19 chr5 177978256 177978461 -21651689 + L1M4 LINE L1 3800 4024 -2122 764 215 14 0 chr5 177978544 177978688 -21651462 + FRAM SINE Alu 1 146 -30 806 203 16 43 chr5 177978832 177979019 -21651131 - MER5A DNA MER1_type 0 189 8 205 167 83 21 chr5 177978986 177979034 -21651116 + L3 LINE CR1 1071 1121 -456 * 1946 84 84 0 chr5 177979483 177979745 -21650405 - AluSc SINE Alu -12 297 14 199 325 185 33 chr5 177980155 177980306 -21649844 - L2 LINE L2 0 3272 3099 2480 49 0 10 chr5 177980338 177980643 -21649507 + AluY SINE Alu 1 302 -9 1439 248 58 37 chr5 177981736 177982220 -21647930 + MLT1D LTR MaLR 3 496 -9 548 246 21 42 chr5 177982228 177982370 -21647780 + MER5B DNA MER1_type 35 173 -5 27 29 0 0 chr5 177982670 177982704 -21647446 + AT_rich Low_complexity Low_complexity 1 34 0 608 157 28 28 chr5 177982767 177982945 -21647205 + CT-rich Low_complexity Low_complexity 1 178 0 241 192 0 27 chr5 177982957 177983030 -21647120 + CT-rich Low_complexity Low_complexity 1 71 0 218 193 36 24 chr5 177983065 177983148 -21647002 + CT-rich Low_complexity Low_complexity 4 87 0 13187 187 27 24 chr5 177983359 177986382 -21643768 - L1MA3 LINE L1 0 7724 4686 2010 145 137 11 chr5 177986382 177986762 -21643388 - MSTA LTR MaLR 0 428 1 13187 187 27 24 chr5 177986762 177988827 -21641323 - L1MA3 LINE L1 -3038 4686 2629 16585 179 26 16 chr5 177988957 177992018 -21638132 - L1M1 LINE L1 -4458 3107 17 1785 132 26 10 chr5 177992034 177992345 -21637805 - L1MA4A LINE L1 -4 6299 5984 12458 205 26 60 chr5 177992347 177993463 -21636687 - L1 LINE L1 -2819 4029 2877 207 0 0 0 chr5 177993463 177993486 -21636664 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 12458 205 26 60 chr5 177993486 177993789 -21636361 - L1 LINE L1 -3971 2877 2565 2135 110 0 0 chr5 177993789 177994109 -21636041 - AluY SINE Alu 0 320 1 12458 205 26 60 chr5 177994109 177996844 -21633306 - L1 LINE L1 -4283 2565 13 26 0 0 0 chr5 177996851 177996877 -21633273 + AT_rich Low_complexity Low_complexity 1 26 0 954 98 0 0 chr5 177996877 177996999 -21633151 - AluY SINE Alu -189 122 1 1993 137 0 33 chr5 177997111 177997418 -21632732 - AluSx SINE Alu -15 297 1 564 296 38 16 chr5 177997804 177997990 -21632160 - MIR SINE MIR -65 197 8 584 307 52 24 chr5 177998915 177999127 -21631023 + MIR SINE MIR 31 248 -14 256 379 26 9 chr5 177999366 177999482 -21630668 - L2 LINE L2 -13 3300 3183 894 270 52 8 chr5 178000013 178000261 -21629889 + L1M4 LINE L1 46 304 -6555 477 224 36 68 chr5 178000346 178000538 -21629612 + L1M4 LINE L1 762 947 -5912 468 248 128 44 chr5 178001031 178001257 -21628893 + L1M4 LINE L1 1205 1449 -5410 6615 58 139 9 chr5 178001259 178002194 -21627956 - L1P LINE L1 -5086 1060 4 5209 223 62 60 chr5 178002193 178003617 -21626533 + L1 LINE L1 2623 4042 -2104 * 2332 92 0 22 chr5 178003617 178003932 -21626218 + AluSg SINE Alu 1 308 -2 5209 223 62 60 chr5 178003932 178003987 -21626163 + L1 LINE L1 4042 4095 -2051 2041 178 0 0 chr5 178003987 178004363 -21625787 - L1MA5A LINE L1 -10 6287 5912 5209 223 62 60 chr5 178004363 178004859 -21625291 + L1 LINE L1 4095 4604 -1542 1241 241 62 10 chr5 178004856 178005246 -21624904 + L1M4 LINE L1 4627 5036 -1921 * 446 210 22 22 chr5 178005269 178005407 -21624743 + L1M4 LINE L1 5145 5282 -1675 305 349 74 6 chr5 178005480 178005655 -21624495 - L1M4 LINE L1 -768 5378 5192 906 298 73 40 chr5 178005672 178005750 -21624400 + L2 LINE L2 2841 2915 -398 2092 48 90 35 chr5 178005750 178006039 -21624111 + AluY SINE Alu 1 305 -6 906 298 73 40 chr5 178006039 178006410 -21623740 + L2 LINE L2 2915 3305 -8 21 0 0 0 chr5 178006822 178006843 -21623307 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr5 178007419 178007459 -21622691 + AT_rich Low_complexity Low_complexity 1 40 0 2376 60 0 0 chr5 178007468 178007753 -21622397 + AluY SINE Alu 1 285 -26 1124 256 127 3 chr5 178007765 178008105 -21622045 + MLT1D LTR MaLR 117 498 -7 258 288 30 38 chr5 178008125 178008257 -21621893 - L1MEd LINE L1 -5377 742 612 2097 161 27 52 chr5 178008494 178008801 -21621349 - LOR1b LTR ERV1 0 461 167 2220 113 0 3 chr5 178008801 178009103 -21621047 - AluSx SINE Alu -10 302 2 2097 161 27 52 chr5 178009103 178009242 -21620908 - LOR1b LTR ERV1 -294 167 26 1255 296 65 32 chr5 178010274 178010988 -21619162 - L2 LINE L2 0 3313 2569 1685 167 42 0 chr5 178012464 178012751 -21617399 + AluJb SINE Alu 1 299 -13 698 67 0 0 chr5 178012751 178012840 -21617310 - L1P3 LINE L1 -505 5667 5579 3557 33 13 13 chr5 178012840 178013289 -21616861 + L1PA7 LINE L1 5704 6152 -2 371 324 82 14 chr5 178013414 178013633 -21616517 + MIR SINE MIR 29 262 0 182 82 33 49 chr5 178014574 178014635 -21615515 + (TTAAA)n Simple_repeat Simple_repeat 3 62 0 24 67 0 0 chr5 178014709 178014754 -21615396 + AT_rich Low_complexity Low_complexity 1 45 0 475 320 67 53 chr5 178016031 178016523 -21613627 - L1MEc LINE L1 -3660 2555 2102 229 370 75 0 chr5 178016914 178017141 -21613009 - L1MEc LINE L1 -4579 1817 1574 194 400 32 0 chr5 178017486 178017611 -21612539 - MIR SINE MIR -6 256 128 202 286 71 0 chr5 178017663 178017719 -21612431 + L2 LINE L2 3155 3214 -58 1317 119 29 119 chr5 178019007 178019319 -21610831 + LTR12 LTR ERV1 1 284 -430 350 214 29 19 chr5 178019320 178019423 -21610727 + LTR30 LTR ERV1 552 655 -67 653 111 0 0 chr5 178019423 178019513 -21610637 + LTR12 LTR ERV1 625 714 0 180 325 63 32 chr5 178019536 178019662 -21610488 - MIR3 SINE MIR -68 140 11 3500 115 83 115 chr5 178020440 178020603 -21609547 + LTR1 LTR ERV1 1 168 -617 1991 123 20 7 chr5 178020603 178020903 -21609247 + AluSq SINE Alu 2 305 -8 3500 115 83 115 chr5 178020903 178021550 -21608600 + LTR1 LTR ERV1 168 785 0 1641 198 44 73 chr5 178022897 178023417 -21606733 + MLT1D LTR MaLR 1 505 0 584 64 0 0 chr5 178023601 178023679 -21606471 - L1PA3 LINE L1 -2 6153 6076 3387 40 0 0 chr5 178023779 178024184 -21605966 - L1P1 LINE L1 -439 5716 5312 11054 24 0 0 chr5 178024184 178025481 -21604669 - L1P1 LINE L1 -1054 5092 3796 1124 22 0 0 chr5 178025477 178025615 -21604535 + L1P LINE L1 5091 5228 -918 * 438 289 42 7 chr5 178025618 178025760 -21604390 + L2 LINE L2 3155 3301 -12 198 103 0 0 chr5 178025761 178025790 -21604360 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 1721 237 64 42 chr5 178026234 178026762 -21603388 + MER77 LTR ERV1 66 605 0 285 288 0 12 chr5 178026766 178026846 -21603304 - MIR SINE MIR -65 197 119 25 65 0 0 chr5 178026890 178026936 -21603214 + AT_rich Low_complexity Low_complexity 1 46 0 2469 161 31 0 chr5 178026962 178027385 -21602765 - Tigger1 DNA MER2_type 0 2418 1983 5877 128 19 71 chr5 178027394 178028475 -21601675 - Tigger1 DNA MER2_type -1172 1246 223 1004 147 7 0 chr5 178028476 178028626 -21601524 + AluJb SINE Alu 1 151 -161 751 208 13 0 chr5 178028626 178028775 -21601375 - Tigger1 DNA MER2_type -2244 174 24 2201 114 3 0 chr5 178029708 178030016 -21600134 + AluSg SINE Alu 2 310 0 23 68 0 0 chr5 178031007 178031051 -21599099 + AT_rich Low_complexity Low_complexity 1 44 0 2043 145 0 10 chr5 178031446 178031756 -21598394 - AluSx SINE Alu -5 307 1 370 311 33 0 chr5 178032736 178032858 -21597292 - MIR SINE MIR -80 182 57 512 309 74 78 chr5 178032912 178032979 -21597171 + L1MEd LINE L1 598 664 -5455 2138 113 3 23 chr5 178032979 178033289 -21596861 + AluSg SINE Alu 1 304 -6 512 309 74 78 chr5 178033289 178033655 -21596495 + L1MEd LINE L1 664 1029 -5090 816 239 38 31 chr5 178033789 178034107 -21596043 + L1M4 LINE L1 4134 4453 -1693 2559 209 98 25 chr5 178035698 178036333 -21593817 + Cheshire DNA MER1_type 156 836 -1584 2291 84 0 7 chr5 178036333 178036630 -21593520 - AluY SINE Alu -16 295 1 1091 135 32 11 chr5 178036661 178036846 -21593304 + Tigger3b DNA MER2_type 349 537 -694 2274 100 10 0 chr5 178037032 178037342 -21592808 + AluSp SINE Alu 1 313 0 586 172 0 0 chr5 178037915 178038014 -21592136 + AluJ/FLAM SINE Alu 1 99 -213 3229 151 100 91 chr5 178038114 178038482 -21591668 + Cheshire DNA MER1_type 1382 1745 -675 1692 167 37 7 chr5 178038482 178038776 -21591374 - AluJo SINE Alu -7 305 3 3229 151 100 91 chr5 178038776 178039236 -21590914 + Cheshire DNA MER1_type 1745 2218 -202 5044 119 1 9 chr5 178039533 178040289 -21589861 + L1PA11 LINE L1 5423 6172 -2 613 332 76 4 chr5 178040496 178040734 -21589416 + MIR SINE MIR 8 262 0 1142 145 6 0 chr5 178041738 178041910 -21588240 - LTR8 LTR ERV1 -9 682 510 30142 40 1 1 chr5 178041913 178046409 -21583741 - L1PA4 LINE L1 -1 6154 1662 24 32 0 0 chr5 178046916 178046947 -21583203 + AT_rich Low_complexity Low_complexity 1 31 0 210 71 0 0 chr5 178046999 178047027 -21583123 + (TCTA)n Simple_repeat Simple_repeat 2 29 0 44101 40 2 2 chr5 178047049 178053210 -21576940 + L1PA3 LINE L1 3 6155 0 219 196 0 22 chr5 178053309 178053355 -21576795 + MIR SINE MIR 106 150 -112 1032 288 63 44 chr5 178053373 178054595 -21575555 - L1ME LINE L1 -4632 2506 1224 427 285 62 7 chr5 178054719 178054863 -21575287 - L1ME LINE L1 -5909 1038 887 2317 97 3 0 chr5 178055695 178055995 -21574155 + AluSp SINE Alu 1 301 -12 5895 94 32 0 chr5 178056877 178057778 -21572372 - L1PA11 LINE L1 -73 6101 5174 197 323 69 39 chr5 178058281 178058411 -21571739 + MIR SINE MIR 55 188 -74 199 175 35 0 chr5 178059444 178059501 -21570649 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 226 256 165 80 chr5 178059553 178059729 -21570421 + L1MEd LINE L1 447 637 -5735 575 231 27 105 chr5 178060151 178060395 -21569755 + L1M4 LINE L1 4777 4990 -1156 1895 216 15 10 chr5 178060395 178060789 -21569361 + MSTD LTR MaLR 1 396 0 575 231 27 105 chr5 178060789 178060877 -21569273 + L1M4 LINE L1 4990 5083 -1063 * 640 275 50 15 chr5 178060874 178061136 -21569014 + L1MEd LINE L1 1475 1745 -4639 387 242 11 0 chr5 178061335 178061426 -21568724 + MER96 DNA MER1_type? 1 92 -83 318 333 50 62 chr5 178061864 178062122 -21568028 - L1ME LINE L1 -6604 255 1 439 290 70 15 chr5 178062218 178062418 -21567732 - MIR SINE MIR -1 261 51 200 364 31 37 chr5 178063386 178063548 -21566602 + MIR SINE MIR 31 191 -71 201 295 347 0 chr5 178063987 178064082 -21566068 + MIR SINE MIR 34 161 -101 * 471 302 8 97 chr5 178064079 178064337 -21565813 - MIR SINE MIR -8 254 20 21 71 0 0 chr5 178064434 178064476 -21565674 + AT_rich Low_complexity Low_complexity 1 42 0 329 335 50 41 chr5 178064568 178064789 -21565361 - MIR SINE MIR -37 225 3 228 344 179 13 chr5 178065407 178065558 -21564592 + MIR SINE MIR 35 210 -52 196 363 0 73 chr5 178065774 178065898 -21564252 - L2 LINE L2 -31 3241 3127 2335 209 44 13 chr5 178066957 178067571 -21562579 - L1MB8 LINE L1 -1 6988 6356 561 256 55 98 chr5 178067569 178067731 -21562419 - L1MB8 LINE L1 -3677 3280 3113 * 577 234 16 0 chr5 178067731 178067855 -21562295 - FLAM_A SINE Alu -6 127 2 561 256 55 98 chr5 178067855 178068213 -21561937 - L1MB8 LINE L1 -3844 3113 2825 1656 179 18 7 chr5 178068213 178068534 -21561616 - AluJb SINE Alu 0 324 1 561 256 55 98 chr5 178068534 178068785 -21561365 - L1MB8 LINE L1 -4132 2825 2565 21 0 0 0 chr5 178068903 178068924 -21561226 + AT_rich Low_complexity Low_complexity 1 21 0 491 194 31 62 chr5 178068924 178069084 -21561066 + L1MEd LINE L1 2604 2758 -3624 5262 183 18 14 chr5 178069089 178071132 -21559018 + L1PA16 LINE L1 4116 6166 0 1622 274 39 17 chr5 178071258 178071505 -21558645 - L1MB8 LINE L1 -4536 2423 2183 321 47 0 0 chr5 178071505 178071548 -21558602 + (TTG)n Simple_repeat Simple_repeat 2 44 0 1622 274 39 17 chr5 178071548 178071950 -21558200 - L1MB8 LINE L1 -4776 2183 1760 300 158 0 0 chr5 178072115 178072172 -21557978 + (TA)n Simple_repeat Simple_repeat 1 57 0 3086 267 50 47 chr5 178072193 178073778 -21556372 - L1MB8 LINE L1 -5191 1668 13 225 325 20 26 chr5 178073951 178074062 -21556088 - MIR SINE MIR -107 101 32 246 116 0 0 chr5 178074076 178074119 -21556031 + (TC)n Simple_repeat Simple_repeat 2 44 0 275 311 16 8 chr5 178074620 178074742 -21555408 + (TATG)n Simple_repeat Simple_repeat 2 124 0 1790 168 3 17 chr5 178074858 178075150 -21555000 + AluSx SINE Alu 1 288 -24 24 32 0 0 chr5 178075441 178075472 -21554678 + AT_rich Low_complexity Low_complexity 1 31 0 2054 125 0 4 chr5 178075482 178075762 -21554388 + AluSx SINE Alu 3 281 -31 23 0 0 0 chr5 178076692 178076715 -21553435 + AT_rich Low_complexity Low_complexity 1 23 0 203 250 0 0 chr5 178077459 178077503 -21552647 + (TG)n Simple_repeat Simple_repeat 1 44 0 347 353 67 20 chr5 178077789 178078005 -21552145 + MIR SINE MIR 4 227 -35 1896 190 89 5 chr5 178078129 178078524 -21551626 + MSTA LTR MaLR 1 428 0 8089 181 34 38 chr5 178078524 178080182 -21549968 + MSTA-int LTR MaLR 1 1651 0 1963 157 110 3 chr5 178080185 178080568 -21549582 + MSTA LTR MaLR 4 427 -1 219 174 22 0 chr5 178080629 178080675 -21549475 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 294 180 0 49 chr5 178080680 178080741 -21549409 - L2 LINE L2 0 3313 3256 2847 308 79 26 chr5 178082256 178083540 -21546610 + L2 LINE L2 1478 2828 -486 481 298 98 98 chr5 178083556 178083925 -21546225 + L2 LINE L2 2945 3313 0 243 298 11 0 chr5 178084191 178084285 -21545865 - MER113 DNA MER1_type? -44 477 383 232 219 81 49 chr5 178084431 178084554 -21545596 - MER113 DNA MER1_type? -377 144 18 251 299 157 8 chr5 178085926 178086060 -21544090 - MIR SINE MIR 0 262 109 1269 231 36 91 chr5 178086710 178087040 -21543110 - MLT1D LTR MaLR -7 498 205 1920 96 4 0 chr5 178087040 178087332 -21542818 + AluSx SINE Alu 35 327 0 1269 231 36 91 chr5 178087332 178087527 -21542623 - MLT1D LTR MaLR -300 205 1 25 0 0 0 chr5 178087730 178087755 -21542395 + AT_rich Low_complexity Low_complexity 1 25 0 58 0 0 0 chr5 178088165 178088223 -21541927 + AT_rich Low_complexity Low_complexity 1 58 0 4860 123 5 4 chr5 178088223 178088964 -21541186 - L1PA15 LINE L1 -13 6152 5411 1239 139 50 25 chr5 178088966 178089168 -21540982 - MER1B DNA MER1_type 0 339 133 228 217 0 0 chr5 178089163 178089209 -21540941 - MER1B DNA MER1_type -291 46 1 * 4319 199 2 7 chr5 178089222 178089333 -21540817 - L1PA15 LINE L1 -743 5403 5293 2054 119 31 0 chr5 178089333 178089626 -21540524 - AluSx SINE Alu -10 302 1 4319 199 2 7 chr5 178089626 178090403 -21539747 - L1PA15 LINE L1 -853 5293 4519 9759 101 48 70 chr5 178090686 178092419 -21537731 + pTR5 LTR ERV1 743 2438 0 28073 125 14 69 chr5 178094429 178100969 -21529181 + L1PA8 LINE L1 1 6171 -1 286 358 80 27 chr5 178100995 178101182 -21528968 - MIR SINE MIR -48 214 18 657 243 20 0 chr5 178101380 178101528 -21528622 - MIR SINE MIR -44 218 68 2206 133 122 8 chr5 178102090 178102474 -21527676 - MSTA LTR MaLR 0 428 1 8880 178 18 9 chr5 178102474 178104111 -21526039 - MSTA-int LTR MaLR 0 1651 1 1981 138 146 8 chr5 178104111 178104487 -21525663 - MSTA LTR MaLR 0 428 1 222 213 0 0 chr5 178104827 178104874 -21525276 + CT-rich Low_complexity Low_complexity 2 48 0 479 369 11 6 chr5 178107972 178108151 -21521999 - MLT1K LTR MaLR -407 181 2 6401 143 18 8 chr5 178108775 178110229 -21519921 - L1MA1 LINE L1 0 6302 4833 899 174 0 27 chr5 178111320 178111469 -21518681 + FRAM SINE Alu 2 146 -30 25 51 0 0 chr5 178111469 178111508 -21518642 + AT_rich Low_complexity Low_complexity 1 39 0 184 250 0 0 chr5 178111559 178111599 -21518551 - L2 LINE L2 -77 3236 3197 368 20 20 0 chr5 178113319 178113368 -21516782 + (CA)n Simple_repeat Simple_repeat 2 51 0 243 247 0 26 chr5 178114112 178114189 -21515961 + L1ME LINE L1 42 116 -5954 330 264 18 9 chr5 178114565 178114675 -21515475 + L1ME3A LINE L1 6024 6134 -36 8846 139 16 13 chr5 178114680 178116140 -21514010 - Tigger1 DNA MER2_type 0 2418 955 1276 130 172 8 chr5 178116141 178116379 -21513771 + LTR12 LTR ERV1 1 277 -437 365 221 0 0 chr5 178116379 178116456 -21513694 + LTR30 LTR ERV1 544 620 -102 696 171 60 0 chr5 178116456 178116573 -21513577 + LTR12 LTR ERV1 355 478 -236 5452 163 11 15 chr5 178116574 178117366 -21512784 - Tigger1 DNA MER2_type -1459 959 168 2116 94 4 0 chr5 178117366 178117661 -21512489 + AluSc SINE Alu 13 308 0 5452 163 11 15 chr5 178117661 178117829 -21512321 - Tigger1 DNA MER2_type -2250 168 1 248 288 0 0 chr5 178118736 178118795 -21511355 + L2 LINE L2 3202 3260 -12 221 343 0 0 chr5 178118995 178119062 -21511088 - L2 LINE L2 -48 3224 3158 214 307 82 29 chr5 178119178 178119396 -21510754 - L2 LINE L2 -257 3015 2022 466 200 9 9 chr5 178119410 178119515 -21510635 - MER53 DNA DNA -84 105 1 336 302 75 19 chr5 178120105 178120264 -21509886 - MIR SINE MIR -1 261 94 5168 165 37 10 chr5 178120325 178121971 -21508179 + L1MA4 LINE L1 4614 6299 -1 2320 91 0 0 chr5 178121983 178122279 -21507871 + AluY SINE Alu 1 296 -15 210 330 36 36 chr5 178122299 178122411 -21507739 - MIR SINE MIR -148 114 3 21 0 0 0 chr5 178122944 178122965 -21507185 + AT_rich Low_complexity Low_complexity 1 21 0 837 331 127 15 chr5 178123527 178124055 -21506095 - MLT1K LTR MaLR 0 588 2 321 264 6 132 chr5 178124184 178124358 -21505792 + L2 LINE L2 2896 3047 -225 1631 112 27 0 chr5 178124869 178125129 -21505021 + L1MA3 LINE L1 6039 6305 0 535 298 127 25 chr5 178125347 178125669 -21504481 + L2 LINE L2 2959 3313 0 213 322 44 0 chr5 178125660 178125750 -21504400 + L2 LINE L2 2987 3080 -192 * 524 276 20 26 chr5 178126666 178126818 -21503332 - L2 LINE L2 0 3313 3163 309 335 20 40 chr5 178127179 178127331 -21502819 + MER5A DNA MER1_type 40 188 -1 1715 130 47 70 chr5 178127409 178127793 -21502357 + THE1C LTR MaLR 1 375 0 255 307 37 28 chr5 178127793 178127929 -21502221 - MER5B DNA MER1_type -38 151 1 26 30 0 0 chr5 178128976 178129009 -21501141 + AT_rich Low_complexity Low_complexity 1 33 0 4290 172 28 34 chr5 178129591 178130643 -21499507 - L1MA8 LINE L1 -61 6230 5191 208 217 31 199 chr5 178132774 178132935 -21497215 - MIR SINE MIR -10 252 119 2198 69 66 0 chr5 178133159 178133447 -21496703 + AluY SINE Alu 1 307 -4 398 226 0 12 chr5 178133524 178133608 -21496542 + MLT1I LTR MaLR 317 399 -10 330 26 0 0 chr5 178134412 178134451 -21495699 + (TG)n Simple_repeat Simple_repeat 2 40 0 1140 187 42 75 chr5 178134970 178135301 -21494849 - MSTD LTR MaLR 0 396 77 359 360 48 64 chr5 178135303 178135784 -21494366 - L2 LINE L2 -1114 2200 1728 389 69 0 17 chr5 178135796 178135854 -21494296 + (TA)n Simple_repeat Simple_repeat 1 57 0 423 111 28 0 chr5 178136178 178136250 -21493900 + MADE1 DNA Mariner 4 77 -3 225 111 0 0 chr5 178136255 178136300 -21493850 - LTR66 LTR ERVL -172 438 394 574 132 42 28 chr5 178136302 178136446 -21493704 + (TATATG)n Simple_repeat Simple_repeat 4 149 0 23 0 0 0 chr5 178136469 178136492 -21493658 + AT_rich Low_complexity Low_complexity 1 23 0 3989 160 50 24 chr5 178136906 178137669 -21492481 - LTR39 LTR ERV1 0 783 1 441 0 0 0 chr5 178137804 178137853 -21492297 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 28 29 0 0 chr5 178141023 178141058 -21489092 + AT_rich Low_complexity Low_complexity 1 35 0 504 271 0 66 chr5 178142232 178142413 -21487737 + MER5B DNA MER1_type 1 169 -9 339 25 0 0 chr5 178142429 178142469 -21487681 + (CA)n Simple_repeat Simple_repeat 2 41 0 1311 182 27 10 chr5 178142803 178143220 -21486930 + LTR54 LTR ERV1 1 510 0 288 0 0 0 chr5 178143489 178143521 -21486629 + (TC)n Simple_repeat Simple_repeat 2 33 0 192 283 19 0 chr5 178145479 178145532 -21484618 + L2 LINE L2 3251 3304 -9 333 0 0 0 chr5 178146035 178146072 -21484078 + (TG)n Simple_repeat Simple_repeat 2 38 0 568 217 43 31 chr5 178147366 178147527 -21482623 - LTR23 LTR ERV1 0 437 275 1119 167 5 33 chr5 178147878 178147963 -21482187 - MER3 DNA MER1_type 0 209 123 1857 115 0 0 chr5 178147963 178148207 -21481943 + AluSg SINE Alu 52 295 -15 1119 167 5 33 chr5 178148207 178148336 -21481814 - MER3 DNA MER1_type -86 123 1 2101 169 130 23 chr5 178149053 178149538 -21480612 - LTR49 LTR ERV1 -49 546 10 714 300 68 92 chr5 178149672 178150588 -21479562 - L2 LINE L2 0 3313 2399 410 312 135 0 chr5 178150914 178151101 -21479049 + MIR SINE MIR 40 249 -13 463 338 59 43 chr5 178151157 178151207 -21478943 - MLT1K LTR MaLR -254 334 286 1932 154 103 10 chr5 178151207 178151597 -21478553 - MSTA LTR MaLR -2 426 1 463 338 59 43 chr5 178151597 178151869 -21478281 - MLT1K LTR MaLR -302 286 7 3568 156 14 19 chr5 178152520 178153169 -21476981 - MER39B LTR ERV1 -5 648 3 1426 217 64 50 chr5 178153971 178154342 -21475808 + MLT1C LTR MaLR 24 403 -64 1755 114 121 4 chr5 178154342 178154622 -21475528 - AluSq SINE Alu 0 313 1 1426 217 64 50 chr5 178154622 178154688 -21475462 + MLT1C LTR MaLR 403 467 0 22 70 0 0 chr5 178155227 178155270 -21474880 + AT_rich Low_complexity Low_complexity 1 43 0 25 65 0 0 chr5 178155392 178155438 -21474712 + AT_rich Low_complexity Low_complexity 1 46 0 2264 105 3 0 chr5 178155880 178156186 -21473964 - AluSg SINE Alu -3 307 1 277 265 48 12 chr5 178156319 178156402 -21473748 - L2 LINE L2 -14 3258 3173 3835 62 0 0 chr5 178157283 178157771 -21472379 - L1PA7 LINE L1 -5 6149 5662 1667 158 33 0 chr5 178157787 178158060 -21472090 - AluSx SINE Alu -30 282 1 456 240 0 0 chr5 178158698 178158819 -21471331 + (TG)n Simple_repeat Simple_repeat 2 122 0 233 208 143 0 chr5 178158822 178158899 -21471251 + L1MC4 LINE L1 6615 6702 -1340 2041 117 0 0 chr5 178159389 178159670 -21470480 + AluSc SINE Alu 5 285 -24 189 0 0 0 chr5 178159674 178159695 -21470455 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 43451 46 2 1 chr5 178159815 178165957 -21464193 - L1PA4 LINE L1 -1 6154 2 194 303 43 99 chr5 178166194 178166356 -21463794 - L2 LINE L2 -5 3267 3115 229 188 138 38 chr5 178166841 178166921 -21463229 + MER103 DNA DNA 3 90 -76 814 154 19 0 chr5 178167134 178167296 -21462854 + (TCTA)n Simple_repeat Simple_repeat 4 168 0 810 188 56 64 chr5 178167839 178168073 -21462077 + MER96B DNA MER1_type? 1 232 -185 1887 126 0 47 chr5 178169473 178169791 -21460359 + AluSg1 SINE Alu 1 303 -6 456 77 0 0 chr5 178170544 178170609 -21459541 + (GGAGA)n Simple_repeat Simple_repeat 2 66 0 203 354 42 37 chr5 178171246 178171461 -21458689 - L2 LINE L2 -1052 2262 2047 2445 237 102 21 chr5 178171692 178172456 -21457694 - L1ME1 LINE L1 -5 6161 5336 441 54 0 0 chr5 178174441 178174497 -21455653 + (TA)n Simple_repeat Simple_repeat 2 57 0 632 198 156 24 chr5 178174679 178174846 -21455304 + MER5A DNA MER1_type 1 189 0 430 297 141 16 chr5 178174897 178175153 -21454997 - L2 LINE L2 0 3313 3026 335 337 11 0 chr5 178175162 178175257 -21454893 + MER5A DNA MER1_type 7 102 -87 216 310 0 0 chr5 178175362 178175421 -21454729 - L2 LINE L2 -308 2964 2906 26 0 0 0 chr5 178175730 178175756 -21454394 + AT_rich Low_complexity Low_complexity 1 26 0 4342 42 0 2 chr5 178176149 178176674 -21453476 + L1PA3 LINE L1 5629 6152 -3 330 272 161 34 chr5 178176903 178177226 -21452924 + MER113 DNA MER1_type? 106 469 -52 488 287 83 6 chr5 178177515 178177726 -21452424 + MIR SINE MIR 31 253 -9 417 218 269 31 chr5 178178491 178178684 -21451466 - MIR SINE MIR -2 260 22 1096 108 27 11 chr5 178179254 178179439 -21450711 + L1MA1 LINE L1 6115 6302 0 534 321 47 5 chr5 178179825 178180018 -21450132 - MIR SINE MIR -25 237 37 316 298 161 19 chr5 178181051 178181212 -21448938 - MIR SINE MIR -6 256 73 486 155 82 0 chr5 178181215 178181312 -21448838 - MER53 DNA DNA -83 106 2 195 250 0 39 chr5 178181577 178181629 -21448521 + L2 LINE L2 3258 3307 -6 7613 41 2 1 chr5 178181737 178183436 -21446714 + L1PA4 LINE L1 4454 6154 -1 438 249 158 18 chr5 178183717 178183882 -21446268 + MIR SINE MIR 73 260 -2 183 42 0 0 chr5 178183981 178184005 -21446145 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2148 115 0 0 chr5 178184008 178184287 -21445863 - AluSc SINE Alu -29 280 2 2190 114 0 0 chr5 178184734 178185024 -21445126 + AluSx SINE Alu 1 290 -22 1913 113 50 30 chr5 178185301 178185603 -21444547 + AluY SINE Alu 1 308 -3 316 275 50 38 chr5 178185778 178185938 -21444212 - Charlie8 DNA MER1_type -2194 223 62 2485 105 119 38 chr5 178186534 178186826 -21443324 + LTR19A LTR ERV1 1 343 -143 2414 67 10 0 chr5 178186826 178187123 -21443027 - AluY SINE Alu -11 300 1 2485 105 119 38 chr5 178187123 178187277 -21442873 + LTR19A LTR ERV1 343 483 -3 6549 132 15 9 chr5 178187288 178187605 -21442545 + LTR19A-int LTR ERV1 1 315 -5271 204 67 0 0 chr5 178187605 178187635 -21442515 + (TCTCTG)n Simple_repeat Simple_repeat 2 31 0 6549 132 15 9 chr5 178187635 178188310 -21441840 + LTR19A-int LTR ERV1 315 999 -4587 515 345 110 5 chr5 178188312 178188738 -21441412 - L1M4 LINE L1 -1971 4175 3705 243 203 58 43 chr5 178190629 178190698 -21439452 + Charlie8 DNA MER1_type 1359 1428 -989 672 242 56 6 chr5 178191134 178191312 -21438838 - MER5A DNA MER1_type 0 189 3 30 27 0 0 chr5 178192116 178192153 -21437997 + AT_rich Low_complexity Low_complexity 1 37 0 1613 221 26 29 chr5 178192228 178192251 -21437899 - MER89 LTR ERV1 0 559 537 1911 200 3 3 chr5 178192251 178192616 -21437534 - MLT1A1 LTR MaLR 0 365 1 1613 221 26 29 chr5 178192616 178192972 -21437178 - MER89 LTR ERV1 -22 537 181 378 185 0 0 chr5 178192976 178193041 -21437109 - MER89 LTR ERV1 -488 71 7 203 304 0 18 chr5 178193266 178193322 -21436828 - L2 LINE L2 0 3313 3259 * 233 343 98 0 chr5 178193311 178193413 -21436737 + L2 LINE L2 298 409 -2905 6793 64 30 1 chr5 178193414 178195029 -21435121 - L1PA8 LINE L1 -5 6167 4509 1768 94 8 0 chr5 178195029 178195294 -21434856 + L1P LINE L1 2958 3224 -2922 411 327 96 19 chr5 178195317 178195577 -21434573 + L2 LINE L2 442 721 -2593 1630 164 0 43 chr5 178195736 178196035 -21434115 + AluJb SINE Alu 1 286 -26 312 27 0 0 chr5 178196056 178196093 -21434057 + (TG)n Simple_repeat Simple_repeat 2 38 0 188 323 15 15 chr5 178196106 178196171 -21433979 + MER5B DNA MER1_type 69 133 -45 21 0 0 0 chr5 178196244 178196265 -21433885 + AT_rich Low_complexity Low_complexity 1 21 0 252 295 129 55 chr5 178196329 178196546 -21433604 + L2 LINE L2 855 1087 -2227 1453 299 133 22 chr5 178196576 178197389 -21432761 + L2 LINE L2 1547 2449 -865 2395 158 59 20 chr5 178197440 178197946 -21432204 - L1MA10 LINE L1 -3 6331 5806 244 184 13 92 chr5 178197947 178198023 -21432127 + L1MA10 LINE L1 5713 5782 -552 262 291 0 0 chr5 178198031 178198110 -21432040 + L2 LINE L2 2495 2573 -741 2212 109 7 34 chr5 178198119 178198464 -21431686 - MER51B LTR ERV1 0 377 50 295 138 313 25 chr5 178198458 178198538 -21431612 - MER51A LTR ERV1 -531 103 1 * 695 336 119 17 chr5 178198542 178198963 -21431187 + L2 LINE L2 2591 3095 -218 1633 182 0 47 chr5 178198963 178199281 -21430869 - AluJo SINE Alu -9 303 1 695 336 119 17 chr5 178199281 178199498 -21430652 + L2 LINE L2 3095 3288 -25 406 322 100 30 chr5 178199570 178199840 -21430310 - L2 LINE L2 -96 3217 2929 2256 105 13 7 chr5 178200133 178200438 -21429712 - AluSg SINE Alu -1 309 3 202 281 52 118 chr5 178200574 178200709 -21429441 + MIR3 SINE MIR 38 163 -45 279 0 0 0 chr5 178201314 178201345 -21428805 + (TG)n Simple_repeat Simple_repeat 1 31 0 1495 158 21 26 chr5 178201385 178201717 -21428433 - MER61C LTR ERV1 -5 429 2 867 138 0 22 chr5 178201911 178202049 -21428101 + LTR8 LTR ERV1 1 135 -556 566 106 0 62 chr5 178202043 178202156 -21427994 + LTR8 LTR ERV1 410 515 -176 * 31054 31 3 0 chr5 178202156 178206671 -21423479 + L1PA3 LINE L1 1630 6154 -1 1142 145 6 0 chr5 178206674 178206846 -21423304 + LTR8 LTR ERV1 510 682 -9 613 332 76 4 chr5 178207850 178208088 -21422062 - MIR SINE MIR 0 262 8 19895 158 12 14 chr5 178208295 178210144 -21420006 - L1PA11 LINE L1 -2 6172 4321 2826 7 0 0 chr5 178210144 178210450 -21419700 - AluY SINE Alu -5 306 1 19895 158 12 14 chr5 178210450 178213238 -21416912 - L1PA11 LINE L1 -1853 4321 1550 24 67 0 0 chr5 178213523 178213568 -21416582 + AT_rich Low_complexity Low_complexity 1 45 0 1831 128 3 48 chr5 178213616 178213906 -21416244 + AluSx SINE Alu 1 277 -35 6820 195 16 28 chr5 178214281 178216249 -21413901 + L1MA9 LINE L1 3843 5788 -524 233 196 20 0 chr5 178216272 178216323 -21413827 - L1M2 LINE L1 -524 5788 5737 2236 196 46 24 chr5 178216359 178216656 -21413494 + L1MA9 LINE L1 5776 6091 -221 1933 81 0 12 chr5 178216656 178216955 -21413195 - AluY SINE Alu 0 333 38 2236 196 46 24 chr5 178216955 178217157 -21412993 + L1MA9 LINE L1 6091 6287 -25 687 295 33 26 chr5 178217191 178217462 -21412688 + MLT1K LTR MaLR 307 579 -9 182 226 38 0 chr5 178217856 178217909 -21412241 + MIR SINE MIR 98 152 -110 343 241 35 23 chr5 178219074 178219161 -21410989 - L2 LINE L2 -16 3297 3210 333 232 51 36 chr5 178219211 178219349 -21410801 + L1MC4 LINE L1 7902 8041 -1 2450 46 19 10 chr5 178219663 178219970 -21410180 + AluY SINE Alu 1 310 -1 207 0 0 0 chr5 178220062 178220085 -21410065 + (A)n Simple_repeat Simple_repeat 1 23 0 231 171 0 0 chr5 178220499 178220570 -21409580 - L1PA10 LINE L1 0 6168 6121 1433 230 64 94 chr5 178221473 178222039 -21408111 - MLT1E2 LTR MaLR -2 624 76 289 252 133 44 chr5 178221946 178222081 -21408069 - MLT2C1 LTR ERVL -199 198 52 * 225 154 0 0 chr5 178222377 178222416 -21407734 + (TA)n Simple_repeat Simple_repeat 1 39 0 2207 115 0 16 chr5 178222416 178222729 -21407421 - AluSx SINE Alu -4 308 1 491 273 32 7 chr5 178223173 178223327 -21406823 + LTR67 LTR ERVL 400 557 0 1411 179 3 105 chr5 178223876 178224201 -21405949 + AluJo SINE Alu 1 292 -20 1209 136 19 0 chr5 178224315 178224529 -21405621 + L1MA4 LINE L1 6077 6294 -6 297 0 0 0 chr5 178224733 178224766 -21405384 + (TG)n Simple_repeat Simple_repeat 1 33 0 1865 125 13 58 chr5 178224996 178225309 -21404841 - AluSq SINE Alu -13 300 2 2289 100 3 0 chr5 178225322 178225623 -21404527 - AluSc SINE Alu -7 302 1 2082 135 0 6 chr5 178225651 178225962 -21404188 - AluSg1 SINE Alu 0 309 1 227 311 41 33 chr5 178226042 178226164 -21403986 + LTR67 LTR ERVL 421 543 -14 371 349 34 7 chr5 178227740 178227889 -21402261 - MIR SINE MIR -97 165 13 2192 105 0 10 chr5 178228868 178229163 -21400987 + AluSg SINE Alu 3 294 -16 2314 75 0 31 chr5 178229165 178229486 -21400664 + AluY SINE Alu 1 311 0 369 0 0 0 chr5 178229496 178229537 -21400613 + (TG)n Simple_repeat Simple_repeat 1 41 0 216 0 0 0 chr5 178229536 178229560 -21400590 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 617 264 37 12 chr5 178229935 178230098 -21400052 - MER5A DNA MER1_type -7 182 16 784 201 43 109 chr5 178230150 178230367 -21399783 + L1MB8 LINE L1 4969 5143 -1017 2094 118 3 0 chr5 178230367 178230664 -21399486 - AluSq SINE Alu -15 298 1 784 201 43 109 chr5 178230664 178230881 -21399269 + L1MB8 LINE L1 5143 5373 -787 228 100 0 0 chr5 178232191 178232231 -21397919 + (TA)n Simple_repeat Simple_repeat 2 41 0 192 40 0 0 chr5 178232230 178232255 -21397895 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 3449 198 64 17 chr5 178232888 178233672 -21396478 + L1MB8 LINE L1 5352 6172 -6 224 354 42 0 chr5 178233930 178234026 -21396124 + L2 LINE L2 3173 3272 0 210 276 103 35 chr5 178234199 178234286 -21395864 + MIR SINE MIR 19 111 -97 477 292 143 47 chr5 178234516 178234858 -21395292 + MLT1L LTR MaLR 20 394 -221 319 331 39 0 chr5 178234893 178235020 -21395130 + MLT1L LTR MaLR 478 609 -6 328 284 0 11 chr5 178235920 178236008 -21394142 + L2 LINE L2 3225 3311 -2 2615 124 11 49 chr5 178236079 178236524 -21393626 - MSTA LTR MaLR 0 428 1 1841 134 16 26 chr5 178239389 178239695 -21390455 + AluJb SINE Alu 3 305 -7 2473 56 0 0 chr5 178239888 178240191 -21389959 - AluY SINE Alu -8 303 1 1889 135 14 0 chr5 178240465 178240762 -21389388 + AluSx SINE Alu 1 301 -11 1026 225 0 9 chr5 178240894 178241125 -21389025 - L1MD1 LINE L1 0 6636 6408 8225 235 94 33 chr5 178241133 178241651 -21388499 - L1MD1 LINE L1 -383 6253 5768 234 0 0 0 chr5 178241651 178241677 -21388473 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 8225 235 94 33 chr5 178241677 178245852 -21384298 - L1MD1 LINE L1 -868 5768 1140 1686 169 43 35 chr5 178245852 178246224 -21383926 + THE1C LTR MaLR 1 375 0 8225 235 94 33 chr5 178246224 178247420 -21382730 - L1MD1 LINE L1 -5496 1140 19 760 371 26 3 chr5 178247843 178248188 -21381962 + MLT1I LTR MaLR 47 399 -10 2025 305 193 10 chr5 178248254 178249736 -21380414 + L2 LINE L2 1584 3313 0 1161 191 35 9 chr5 178249984 178250214 -21379936 + MER46A DNA MER2_type 1 236 0 629 115 10 0 chr5 178250275 178250371 -21379779 - L1PB4 LINE L1 -2 6154 6058 962 140 6 0 chr5 178250603 178250782 -21379368 + (TA)n Simple_repeat Simple_repeat 1 180 0 316 227 23 11 chr5 178250793 178250881 -21379269 + L1MC4 LINE L1 6614 6702 -1340 967 121 3 16 chr5 178250916 178251281 -21378869 + (TA)n Simple_repeat Simple_repeat 1 359 0 324 198 81 23 chr5 178251292 178251378 -21378772 + L1MC4 LINE L1 6613 6703 -1339 368 100 50 0 chr5 178251760 178251840 -21378310 + (TA)n Simple_repeat Simple_repeat 1 84 0 335 220 22 33 chr5 178251840 178251931 -21378219 + L1MC4 LINE L1 6612 6701 -1341 210 150 0 0 chr5 178251933 178251973 -21378177 + (TA)n Simple_repeat Simple_repeat 2 41 0 227 190 152 0 chr5 178251974 178252053 -21378097 + L1MC4 LINE L1 6612 6702 -1340 1221 189 4 34 chr5 178253324 178253557 -21376593 + 7SLRNA srpRNA srpRNA 1 226 -94 1695 87 8 8 chr5 178253558 178253799 -21376351 + L1PA10 LINE L1 5912 6152 -16 633 178 0 0 chr5 178253874 178253981 -21376169 + 7SLRNA srpRNA srpRNA 213 319 -1 21 36 0 0 chr5 178254055 178254083 -21376067 + AT_rich Low_complexity Low_complexity 1 28 0 201 121 0 0 chr5 178254899 178254932 -21375218 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 386 304 40 56 chr5 178255241 178255473 -21374677 - MIR SINE MIR 0 262 36 1808 209 203 4 chr5 178255976 178256445 -21373705 - MLT1F1 LTR MaLR -1 566 5 350 333 23 34 chr5 178257109 178257286 -21372864 + HAL1 LINE L1 1116 1290 -1217 746 201 24 6 chr5 178258127 178258291 -21371859 + FRAM SINE Alu 2 168 -8 2741 99 5 0 chr5 178258351 178258734 -21371416 - L1PA10 LINE L1 -15 6153 5769 667 261 126 17 chr5 178258743 178258973 -21371177 - L1MC4 LINE L1 -1020 7022 6768 4618 24 9 2 chr5 178259665 178260210 -21369940 - L1PA3 LINE L1 0 6155 5607 3679 87 21 38 chr5 178260210 178260314 -21369836 - L1P4 LINE L1 -398 5770 5666 237 98 0 0 chr5 178260314 178260355 -21369795 + (TA)n Simple_repeat Simple_repeat 1 41 0 3679 87 21 38 chr5 178260355 178261079 -21369071 - L1P4 LINE L1 -502 5666 4948 613 172 35 28 chr5 178261110 178261255 -21368895 + L1MB3 LINE L1 6036 6181 -2 2374 128 48 14 chr5 178261671 178262085 -21368065 - MSTA LTR MaLR 0 428 1 1861 188 11 6 chr5 178262120 178262477 -21367673 - MLT1B LTR MaLR -30 360 2 372 328 40 0 chr5 178262982 178263107 -21367043 - L2 LINE L2 -1 3312 3183 3299 166 74 80 chr5 178263254 178264129 -21366021 + L1MB8 LINE L1 5304 6173 -5 22 35 0 0 chr5 178265225 178265254 -21364896 + AT_rich Low_complexity Low_complexity 1 29 0 234 91 0 0 chr5 178265594 178265627 -21364523 + (CA)n Simple_repeat Simple_repeat 1 33 0 777 317 20 8 chr5 178266437 178266683 -21363467 + MIR SINE MIR 12 260 -2 407 291 75 34 chr5 178266684 178266976 -21363174 - L1ME4a LINE L1 -255 5866 5563 499 270 111 16 chr5 178267747 178267936 -21362214 + MLT1J LTR MaLR 19 225 -286 931 322 45 18 chr5 178268184 178268582 -21361568 + LTR16A LTR ERVL 35 443 -7 371 304 98 47 chr5 178268610 178268824 -21361326 + L2 LINE L2 1992 2216 -1098 408 338 45 13 chr5 178268825 178268940 -21361210 + L2 LINE L2 2664 2787 -527 198 0 0 0 chr5 178268940 178268962 -21361188 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 408 338 45 13 chr5 178268962 178268989 -21361161 + L2 LINE L2 2787 2811 -503 466 306 11 22 chr5 178268989 178269169 -21360981 + MER5B DNA MER1_type 1 178 0 814 320 103 11 chr5 178269178 178269514 -21360636 + L2 LINE L2 2812 3202 -111 2505 197 14 18 chr5 178269514 178270021 -21360129 - MLT1D LTR MaLR 0 505 1 814 320 103 11 chr5 178270021 178270140 -21360010 + L2 LINE L2 3202 3309 -4 218 404 44 0 chr5 178270585 178270699 -21359451 + L2 LINE L2 3154 3272 0 437 229 33 8 chr5 178270931 178271053 -21359097 + L2 LINE L2 2416 2540 -774 606 251 90 60 chr5 178271055 178271428 -21358722 + MLT1J2 LTR MaLR 1 436 -14 318 303 169 28 chr5 178271715 178271969 -21358181 + L2 LINE L2 3023 3312 -1 200 318 9 18 chr5 178272031 178272141 -21358009 + CT-rich Low_complexity Low_complexity 2 110 0 24 67 0 0 chr5 178273020 178273065 -21357085 + AT_rich Low_complexity Low_complexity 1 45 0 252 0 0 0 chr5 178273434 178273462 -21356688 + (TG)n Simple_repeat Simple_repeat 2 29 0 201 296 93 0 chr5 178273467 178273521 -21356629 - L2 LINE L2 -47 3266 3208 228 100 0 0 chr5 178274208 178274248 -21355902 + (CAAAAA)n Simple_repeat Simple_repeat 5 44 0 1858 31 0 0 chr5 178274372 178274598 -21355552 + L1PA4 LINE L1 5930 6155 0 23 33 0 0 chr5 178274951 178274981 -21355169 + AT_rich Low_complexity Low_complexity 1 30 0 238 219 62 0 chr5 178277258 178277322 -21352828 + L3 LINE CR1 792 859 -718 376 288 237 14 chr5 178277491 178277710 -21352440 + L3 LINE CR1 967 1234 -343 2131 49 0 0 chr5 178277768 178278014 -21352136 + AluY SINE Alu 55 300 -11 318 313 23 47 chr5 178278019 178278147 -21352003 + L3 LINE CR1 1383 1507 -70 7545 93 5 19 chr5 178279272 178280344 -21349806 + MER11C LTR ERVK 1 1057 -14 254 302 16 0 chr5 178280432 178280495 -21349655 - MIR SINE MIR -104 104 41 2822 10 0 0 chr5 178281619 178281925 -21348225 - AluYb8 SINE Alu -5 313 8 244 341 124 8 chr5 178283189 178283318 -21346832 - MIR SINE MIR -114 148 5 772 169 62 89 chr5 178283775 178283928 -21346222 - MER20 DNA MER1_type 0 219 72 1912 151 17 0 chr5 178283928 178284226 -21345924 + AluSx SINE Alu 1 303 -9 772 169 62 89 chr5 178284226 178284297 -21345853 - MER20 DNA MER1_type -147 72 1 278 283 8 0 chr5 178284712 178284832 -21345318 + CT-rich Low_complexity Low_complexity 2 122 0 423 349 46 46 chr5 178284845 178285324 -21344826 + L2 LINE L2 2033 2511 -803 886 275 21 9 chr5 178285734 178285967 -21344183 - MIR SINE MIR -26 236 1 611 0 0 0 chr5 178286423 178286491 -21343659 - L1PA4 LINE L1 -181 5974 5907 1348 52 11 0 chr5 178286491 178286662 -21343488 + L1PA4 LINE L1 5980 6155 0 220 312 182 19 chr5 178286678 178286832 -21343318 - MIR SINE MIR -51 211 33 237 329 58 19 chr5 178288213 178288368 -21341782 - MLT1J LTR MaLR -266 245 85 454 279 81 10 chr5 178288698 178288895 -21341255 + MIR SINE MIR 38 248 -14 307 335 60 48 chr5 178289330 178289497 -21340653 + MIR SINE MIR 4 176 -32 207 250 89 0 chr5 178289530 178289586 -21340564 + L2 LINE L2 3193 3253 -19 258 32 0 0 chr5 178290754 178290785 -21339365 + (GAAA)n Simple_repeat Simple_repeat 3 33 0 2173 88 26 19 chr5 178291360 178291667 -21338483 - AluSg SINE Alu -1 309 1 212 337 112 3 chr5 178291997 178292168 -21337982 - MIR3 SINE MIR -58 204 12 198 0 0 0 chr5 178293008 178293030 -21337120 + (TTG)n Simple_repeat Simple_repeat 2 23 0 3153 68 5 2 chr5 178293030 178293441 -21336709 - L1PA5 LINE L1 -14 6140 5729 928 146 121 0 chr5 178293643 178293808 -21336342 + AluJo SINE Alu 121 305 -7 191 318 73 9 chr5 178294085 178294195 -21335955 - MIR SINE MIR -60 202 86 2150 111 14 0 chr5 178294288 178294576 -21335574 - AluSq SINE Alu -21 292 1 631 115 0 0 chr5 178294576 178294663 -21335487 - AluS SINE Alu -225 87 1 2193 122 0 0 chr5 178294808 178295103 -21335047 - AluSx SINE Alu -17 295 1 543 264 52 30 chr5 178295243 178295619 -21334531 - L1MC4 LINE L1 -387 7655 7252 607 182 140 114 chr5 178295968 178296050 -21334100 - L1MC4 LINE L1 -974 7068 6990 2057 117 0 4 chr5 178296050 178296331 -21333819 - AluSx SINE Alu -32 280 1 607 182 140 114 chr5 178296331 178296484 -21333666 - L1MC4 LINE L1 -1052 6990 6827 1983 115 0 26 chr5 178297013 178297318 -21332832 - AluSc SINE Alu -12 297 1 1069 135 34 17 chr5 178297558 178297736 -21332414 + AluSg SINE Alu 1 181 -129 2030 139 7 7 chr5 178297836 178298137 -21332013 - AluSx SINE Alu -11 301 1 205 283 0 0 chr5 178299294 178299340 -21330810 - MER5B DNA MER1_type -131 47 2 256 250 0 0 chr5 178299690 178299750 -21330400 + MLT1K LTR MaLR 510 569 -19 313 289 41 16 chr5 178299755 178299876 -21330274 - MIR SINE MIR -108 154 31 1178 106 6 0 chr5 178300620 178300780 -21329370 - AluYa5 SINE Alu -17 294 134 248 346 38 23 chr5 178301010 178301143 -21329007 - L2 LINE L2 -219 3053 2919 256 342 33 25 chr5 178302569 178302689 -21327461 + MLT1K LTR MaLR 110 230 -358 250 280 87 95 chr5 178302820 178303084 -21327066 - MLT1I LTR MaLR -141 268 7 450 314 33 33 chr5 178304396 178304641 -21325509 - MLT1I LTR MaLR 0 409 165 1615 147 20 0 chr5 178305177 178305422 -21324728 + AluSq SINE Alu 34 283 -30 30 27 0 0 chr5 178305660 178305697 -21324453 + AT_rich Low_complexity Low_complexity 1 37 0 1555 223 69 46 chr5 178305861 178306340 -21323810 - MLT1D LTR MaLR -13 492 3 2230 102 17 0 chr5 178307130 178307424 -21322726 - AluSx SINE Alu -13 299 1 2441 102 11 8 chr5 178308687 178309040 -21321110 - THE1A LTR MaLR -1 354 1 11002 97 21 2 chr5 178309040 178310591 -21319559 - THE1A-int LTR MaLR 0 1580 1 2305 110 14 14 chr5 178310591 178310946 -21319204 - THE1A LTR MaLR 0 355 1 531 202 81 52 chr5 178312580 178312753 -21317397 + L1M4 LINE L1 5052 5229 -917 22 0 0 0 chr5 178312890 178312912 -21317238 + AT_rich Low_complexity Low_complexity 1 22 0 1513 149 8 0 chr5 178313336 178313571 -21316579 - Tigger3(Golem) DNA MER2_type -1 3028 2792 280 288 72 14 chr5 178314038 178314177 -21315973 - L1ME LINE L1 -269 5852 5706 3154 191 87 16 chr5 178314717 178315486 -21314664 - L1MA4 LINE L1 -6 6294 5471 558 126 53 0 chr5 178315546 178315641 -21314509 - L1MB7 LINE L1 -6 6178 6079 1205 251 59 8 chr5 178315825 178316199 -21313951 + L1MC4 LINE L1 7420 7812 -230 238 230 68 0 chr5 178316316 178316390 -21313760 + L1MC4 LINE L1 7824 7902 -140 235 370 0 14 chr5 178316785 178316858 -21313292 - MIR SINE MIR -163 99 28 2325 231 4 35 chr5 178317035 178317584 -21312566 + MLT2B3 LTR ERVL 1 493 -22 182 326 22 34 chr5 178317915 178318004 -21312146 - L2 LINE L2 0 3313 3226 559 329 63 5 chr5 178318831 178319053 -21311097 - MIR SINE MIR -12 250 16 210 271 0 0 chr5 178319125 178319173 -21310977 + L2 LINE L2 3264 3311 -2 220 346 109 52 chr5 178319200 178319567 -21310583 + L2 LINE L2 2926 3313 0 35925 58 1 2 chr5 178319799 178325239 -21304911 + L1PA3 LINE L1 720 6155 0 189 0 0 0 chr5 178326624 178326645 -21303505 + (A)n Simple_repeat Simple_repeat 1 21 0 3630 250 151 19 chr5 178328375 178329510 -21300640 + L1M4b LINE L1 7 1291 -5568 27 73 0 0 chr5 178329566 178329621 -21300529 + AT_rich Low_complexity Low_complexity 1 55 0 484 268 128 55 chr5 178329630 178329794 -21300356 + L1MB8 LINE L1 335 510 -6349 319 168 51 58 chr5 178329806 178329996 -21300154 + (TTATA)n Simple_repeat Simple_repeat 1 188 0 6965 31 14 0 chr5 178329997 178330837 -21299313 - L1PA3 LINE L1 -1193 4953 4102 7560 33 0 0 chr5 178330837 178332040 -21298110 + L1PA3 LINE L1 4949 6151 -4 1683 269 80 45 chr5 178332081 178332947 -21297203 + L1MB8 LINE L1 1334 2229 -4730 * 6070 225 25 12 chr5 178332941 178333714 -21296436 + L1MB8 LINE L1 4587 5349 -1640 2043 173 26 21 chr5 178333714 178334102 -21296048 + MLT1B LTR MaLR 1 390 0 6070 225 25 12 chr5 178334102 178335353 -21294797 + L1MB8 LINE L1 5349 6629 -360 859 122 14 0 chr5 178335364 178335503 -21294647 + AluSg/x SINE Alu 170 310 0 1341 207 77 12 chr5 178335515 178335838 -21294312 + L1MB8 LINE L1 6641 6984 -5 422 339 31 0 chr5 178336559 178336689 -21293461 + L2 LINE L2 3179 3312 -1 387 41 0 0 chr5 178339242 178339291 -21290859 + (CA)n Simple_repeat Simple_repeat 1 49 0 253 396 82 47 chr5 178339455 178339796 -21290354 - L2 LINE L2 -55 3217 2865 2183 126 3 0 chr5 178340761 178341070 -21289080 + AluSx SINE Alu 1 310 -2 2397 116 43 31 chr5 178341255 178341635 -21288515 + MSTA LTR MaLR 1 375 -53 297 68 0 0 chr5 178341635 178341679 -21288471 + (TATG)n Simple_repeat Simple_repeat 2 45 0 1931 148 3 0 chr5 178341679 178341970 -21288180 - AluSq SINE Alu -21 292 1 2397 116 43 31 chr5 178341970 178342011 -21288139 + MSTA LTR MaLR 374 428 0 1553 157 75 0 chr5 178342417 178342537 -21287613 + AluJb SINE Alu 1 111 -201 564 15 0 0 chr5 178342537 178342602 -21287548 + (CA)n Simple_repeat Simple_repeat 2 66 0 1553 157 75 0 chr5 178342602 178342748 -21287402 + AluJb SINE Alu 111 287 -25 39 0 0 0 chr5 178342751 178342790 -21287360 + AT_rich Low_complexity Low_complexity 1 39 0 235 284 39 10 chr5 178342977 178343079 -21287071 + LTR37B LTR ERV1 8 112 -356 710 195 33 57 chr5 178343163 178343505 -21286645 + LTR37A LTR ERV1 125 426 0 24 0 0 0 chr5 178344218 178344242 -21285908 + AT_rich Low_complexity Low_complexity 1 24 0 351 0 0 0 chr5 178344285 178344324 -21285826 + (TG)n Simple_repeat Simple_repeat 1 39 0 1181 138 18 138 chr5 178345742 178346082 -21284068 - L1M1 LINE L1 -738 5562 5264 414 122 353 0 chr5 178346066 178346205 -21283945 + L1MA6 LINE L1 6108 6295 -5 * 21 0 0 0 chr5 178346205 178346226 -21283924 + AT_rich Low_complexity Low_complexity 1 21 0 905 290 118 32 chr5 178346279 178346821 -21283329 + L2 LINE L2 2728 3313 0 389 239 58 111 chr5 178347116 178347359 -21282791 + MLT1I LTR MaLR 60 289 -120 308 309 55 39 chr5 178348099 178348280 -21281870 + MLT1I LTR MaLR 206 389 -20 2290 171 61 14 chr5 178348346 178348786 -21281364 - LOR1b LTR ERV1 0 461 1 615 111 0 0 chr5 178348786 178348876 -21281274 - LOR1b-int LTR ERV1 0 8120 8031 1287 132 123 4 chr5 178348877 178349112 -21281038 - LOR1b-int LTR ERV1 -2057 6063 5801 * 16403 117 19 23 chr5 178349102 178351806 -21278344 - LOR1b-int LTR ERV1 -2596 5524 2833 7015 113 64 12 chr5 178351801 178354147 -21276003 - LOR1b-int LTR ERV1 -5597 2523 1 * 2012 180 59 3 chr5 178354147 178354535 -21275615 - LOR1b LTR ERV1 0 461 52 2940 124 28 0 chr5 178354555 178355024 -21275126 - L1PB1 LINE L1 -8 6143 5662 1504 180 58 14 chr5 178355216 178355494 -21274656 - AluJb SINE Alu -22 290 1 22 35 0 0 chr5 178355498 178355527 -21274623 + AT_rich Low_complexity Low_complexity 1 29 0 601 297 55 38 chr5 178355992 178356282 -21273868 + L2 LINE L2 3014 3308 -5 5026 129 57 58 chr5 178356375 178357504 -21272646 + pTR5 LTR ERV1 1174 2438 0 1771 168 0 13 chr5 178357726 178358035 -21272115 + AluJb SINE Alu 1 305 -7 35 41 0 0 chr5 178358453 178358502 -21271648 + AT_rich Low_complexity Low_complexity 1 49 0 752 217 38 22 chr5 178359167 178359351 -21270799 + MER5A DNA MER1_type 3 189 0 335 261 22 0 chr5 178360055 178360147 -21270003 + L1MC4 LINE L1 6610 6703 -1339 207 186 0 0 chr5 178360147 178360190 -21269960 + (TATG)n Simple_repeat Simple_repeat 3 45 0 257 337 11 0 chr5 178361151 178361250 -21268900 + GA-rich Low_complexity Low_complexity 1 100 0 360 231 113 63 chr5 178361472 178361710 -21268440 - MER113 DNA MER1_type? -46 475 226 252 0 0 0 chr5 178362034 178362062 -21268088 + (TG)n Simple_repeat Simple_repeat 2 29 0 619 200 208 8 chr5 178362210 178362465 -21267685 + MER33 DNA MER1_type 19 324 0 33 0 0 0 chr5 178364157 178364190 -21265960 + AT_rich Low_complexity Low_complexity 1 33 0 2790 200 24 86 chr5 178364600 178366068 -21264082 - L1MC3 LINE L1 -860 6925 5614 1417 77 14 48 chr5 178366180 178366389 -21263761 + MER30 DNA MER1_type 1 202 -28 192 125 0 0 chr5 178366467 178366499 -21263651 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 363 232 118 43 chr5 178366766 178367094 -21263056 - MER113 DNA MER1_type? -83 438 44 2159 114 10 0 chr5 178367525 178367832 -21262318 + AluSx SINE Alu 1 310 -2 321 331 22 7 chr5 178367963 178368099 -21262051 + HAL1b LINE L1 327 464 -884 691 294 16 10 chr5 178368100 178368294 -21261856 + MLT1D LTR MaLR 1 195 -310 1023 124 7 0 chr5 178368298 178368451 -21261699 - AluSx SINE Alu -9 303 150 576 115 0 0 chr5 178368451 178368538 -21261612 - AluSx SINE Alu -226 87 1 568 302 79 9 chr5 178368554 178368769 -21261381 + MLT1D LTR MaLR 191 420 -47 4243 264 38 18 chr5 178368787 178371587 -21258563 + L1PA13 LINE L1 1 3345 -3452 9402 219 22 27 chr5 178372071 178372457 -21257693 + L1PA13 LINE L1 3358 3744 -3053 2723 26 0 0 chr5 178372457 178372768 -21257382 + AluY SINE Alu 1 311 0 9402 219 22 27 chr5 178372768 178374443 -21255707 + L1PA13 LINE L1 3744 5408 -1389 2066 141 33 30 chr5 178374443 178374806 -21255344 + THE1B LTR MaLR 1 364 0 9402 219 22 27 chr5 178374806 178375139 -21255011 + L1PA13 LINE L1 5408 5741 -1056 432 154 49 8 chr5 178375209 178375332 -21254818 + CT-rich Low_complexity Low_complexity 3 130 0 288 105 53 53 chr5 178375332 178375389 -21254761 + MLT2C1 LTR ERVL 341 397 0 2206 96 7 0 chr5 178375444 178375737 -21254413 - AluSc SINE Alu -14 295 1 23 68 0 0 chr5 178375748 178375792 -21254358 + AT_rich Low_complexity Low_complexity 1 44 0 839 48 0 0 chr5 178375826 178375930 -21254220 - L1PA4 LINE L1 -2 6153 6050 899 187 55 22 chr5 178375933 178376115 -21254035 + AluSx SINE Alu 42 229 -83 206 366 40 10 chr5 178376764 178376865 -21253285 + L2 LINE L2 3163 3266 -6 22 0 0 0 chr5 178377001 178377023 -21253127 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 178377481 178377510 -21252640 + AT_rich Low_complexity Low_complexity 1 29 0 2218 93 3 3 chr5 178378425 178378725 -21251425 - AluSq SINE Alu -13 300 1 495 240 32 24 chr5 178378902 178379027 -21251123 - MIR SINE MIR -24 238 113 936 249 51 31 chr5 178379312 178379605 -21250545 - L1MD2 LINE L1 0 6359 6061 306 143 0 36 chr5 178379615 178379671 -21250479 + L1MC4 LINE L1 6649 6702 -1340 222 333 0 0 chr5 178379679 178379838 -21250312 + (TA)n Simple_repeat Simple_repeat 2 160 0 465 371 0 2 chr5 178379859 178380685 -21249465 + (TA)n Simple_repeat Simple_repeat 1 824 0 328 315 0 0 chr5 178380687 178380776 -21249374 + L1MC4 LINE L1 6615 6703 -1339 234 220 0 0 chr5 178380777 178380836 -21249314 + (CATATA)n Simple_repeat Simple_repeat 5 63 0 250 236 22 22 chr5 178380836 178380925 -21249225 + L1MC4 LINE L1 6614 6702 -1340 354 45 0 0 chr5 178380956 178381000 -21249150 + (CA)n Simple_repeat Simple_repeat 2 45 0 22 56 0 0 chr5 178381139 178381175 -21248975 + AT_rich Low_complexity Low_complexity 1 36 0 225 288 129 30 chr5 178381400 178381532 -21248618 - MIR3 SINE MIR -21 187 43 225 264 11 0 chr5 178382520 178382581 -21247569 + MIR SINE MIR 63 126 -82 346 235 22 0 chr5 178383464 178383600 -21246550 + (TA)n Simple_repeat Simple_repeat 1 139 0 518 340 172 31 chr5 178383686 178384325 -21245825 + L2 LINE L2 2247 2975 -339 290 337 24 0 chr5 178384554 178384637 -21245513 + L2 LINE L2 3184 3268 -4 22 35 0 0 chr5 178385577 178385606 -21244544 + AT_rich Low_complexity Low_complexity 1 29 0 227 93 23 0 chr5 178385687 178385730 -21244420 + (CAAAAA)n Simple_repeat Simple_repeat 3 46 0 648 289 84 61 chr5 178386046 178386772 -21243378 + L2 LINE L2 2669 3312 -1 1958 117 41 0 chr5 178386956 178387249 -21242901 - AluSx SINE Alu 0 310 7 24 0 0 0 chr5 178388190 178388214 -21241936 + AT_rich Low_complexity Low_complexity 1 24 0 2341 117 31 21 chr5 178388673 178389102 -21241048 + MER4C LTR ERV1 1 388 -77 398 214 0 0 chr5 178389047 178389163 -21240987 - AluJb SINE Alu 0 338 223 * 1384 153 24 48 chr5 178389178 178389427 -21240723 - AluJb SINE Alu -69 243 1 192 40 0 0 chr5 178389430 178389455 -21240695 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 618 51 0 13 chr5 178389456 178389535 -21240615 + MER4C LTR ERV1 388 465 0 21 36 0 0 chr5 178389585 178389613 -21240537 + AT_rich Low_complexity Low_complexity 1 28 0 423 0 0 0 chr5 178389646 178389693 -21240457 + (CA)n Simple_repeat Simple_repeat 2 48 0 328 49 0 0 chr5 178389695 178389736 -21240414 + MLT2A2 LTR ERVL 413 453 0 2295 67 3 55 chr5 178389925 178390253 -21239897 - AluY SINE Alu 0 311 1 279 322 53 26 chr5 178390436 178390588 -21239562 - L2 LINE L2 0 3313 3158 31 0 0 0 chr5 178391226 178391257 -21238893 + AT_rich Low_complexity Low_complexity 1 31 0 290 118 39 0 chr5 178391262 178391313 -21238837 - L1MB1 LINE L1 -1 5991 5939 416 108 40 0 chr5 178391358 178391432 -21238718 - L1PB3 LINE L1 -2 6152 6076 3015 140 30 8 chr5 178391532 178392039 -21238111 - L1PB3 LINE L1 -45 6109 5592 3379 188 52 1 chr5 178392039 178392730 -21237420 - L1MB1 LINE L1 -37 5955 5230 8283 233 43 83 chr5 178392754 178393306 -21236844 - L1MB1 LINE L1 -841 5129 4556 861 109 29 14 chr5 178393306 178393444 -21236706 - BC200 scRNA scRNA -55 145 6 8283 233 43 83 chr5 178393444 178395980 -21234170 - L1MB1 LINE L1 -1414 4556 2033 2318 87 10 0 chr5 178395983 178396282 -21233868 - AluSq SINE Alu -11 302 1 3977 256 93 33 chr5 178396282 178398570 -21231580 - L1MB1 LINE L1 -3929 2041 2 248 331 57 8 chr5 178398591 178398715 -21231435 - MER102a DNA MER1_type -5 325 196 1795 266 46 39 chr5 178398776 178399389 -21230761 - MLT1E2 LTR MaLR -3 623 7 2536 61 0 6 chr5 178399612 178399924 -21230226 + AluY SINE Alu 1 310 -1 2578 79 6 6 chr5 178399937 178400292 -21229858 - THE1A LTR MaLR 0 355 1 24 91 0 0 chr5 178400631 178400697 -21229453 + AT_rich Low_complexity Low_complexity 1 66 0 378 343 31 23 chr5 178400831 178401057 -21229093 + MIR SINE MIR 17 248 -14 2159 109 0 0 chr5 178401318 178401602 -21228548 + AluY SINE Alu 1 284 -27 265 268 0 24 chr5 178401616 178401739 -21228411 + A-rich Low_complexity Low_complexity 4 123 0 192 179 0 26 chr5 178401905 178401944 -21228206 - MIR3 SINE MIR -13 195 158 610 296 42 71 chr5 178402192 178402595 -21227555 + MLT1I LTR MaLR 2 409 0 198 222 48 48 chr5 178402647 178402710 -21227440 - MIR3 SINE MIR -140 68 6 233 340 189 13 chr5 178402751 178402904 -21227246 - L3 LINE CR1 -24 1553 1374 403 299 24 47 chr5 178402949 178403076 -21227074 - L2 LINE L2 -4 3268 3145 339 290 99 17 chr5 178404061 178404172 -21225978 + MIR SINE MIR 62 194 -68 2568 194 28 4 chr5 178404172 178404632 -21225518 - MER70A LTR ERVL 0 472 2 339 290 99 17 chr5 178404632 178404693 -21225457 + MIR SINE MIR 194 249 -13 646 320 60 16 chr5 178404746 178404996 -21225154 - MIR SINE MIR 0 262 2 184 286 63 0 chr5 178405276 178405339 -21224811 + MIR SINE MIR 80 146 -116 8654 171 37 35 chr5 178405692 178408750 -21221400 - L1MA4A LINE L1 -11 7354 4301 8232 220 75 31 chr5 178408807 178411255 -21218895 - L1MA4A LINE L1 -4731 2478 7 23 33 0 0 chr5 178412212 178412242 -21217908 + AT_rich Low_complexity Low_complexity 1 30 0 1151 50 0 0 chr5 178412245 178412386 -21217764 - L1PA3 LINE L1 -1 6154 6014 455 167 0 0 chr5 178412386 178412470 -21217680 - L1 LINE L1 -1103 5043 4960 809 107 68 198 chr5 178412478 178412741 -21217409 - L1 LINE L1 -1377 4769 4541 * 1906 181 27 18 chr5 178412736 178413352 -21216798 + L1MA4 LINE L1 5047 5665 -640 660 323 114 11 chr5 178413637 178413996 -21216154 - MLT1K LTR MaLR -4 584 189 8527 107 6 25 chr5 178414985 178416325 -21213825 + L1P LINE L1 1427 2740 -3406 1521 116 5 5 chr5 178416428 178416643 -21213507 + AluSq SINE Alu 91 305 -8 1957 128 54 41 chr5 178416967 178417335 -21212815 - THE1C LTR MaLR -2 373 1 16207 35 9 1 chr5 178417850 178419876 -21210274 + L1P LINE L1 2376 4417 -1729 500 277 173 56 chr5 178419996 178420371 -21209779 - L2 LINE L2 -925 2389 1971 246 228 44 61 chr5 178421610 178421724 -21208426 - MER103 DNA DNA -4 162 51 291 337 99 17 chr5 178421941 178422113 -21208037 - L2 LINE L2 -220 3052 2867 324 319 96 73 chr5 178422373 178423001 -21207149 - L2 LINE L2 -946 2368 1727 240 330 135 20 chr5 178423026 178423226 -21206924 - L2 LINE L2 -1726 1588 1366 2409 60 3 10 chr5 178423293 178423594 -21206556 - AluY SINE Alu -6 305 7 817 110 8 0 chr5 178423594 178423712 -21206438 + AluSg/x SINE Alu 189 307 -5 561 140 0 11 chr5 178424036 178424129 -21206021 - AluSg/x SINE Alu 0 310 219 1554 197 16 26 chr5 178424229 178424615 -21205535 + L1MA4 LINE L1 5914 6295 -5 279 98 39 0 chr5 178425688 178425739 -21204411 + AluSc SINE Alu 246 298 -1 5137 168 43 51 chr5 178425969 178426025 -21204125 - L1MC1 LINE L1 -9 6324 6269 2443 69 0 3 chr5 178426025 178426328 -21203822 + AluY SINE Alu 1 302 -9 5137 168 43 51 chr5 178426328 178427760 -21202390 - L1MC1 LINE L1 -64 6269 4831 218 31 0 31 chr5 178427962 178427994 -21202156 + (GGAAA)n Simple_repeat Simple_repeat 5 35 0 2441 113 19 16 chr5 178428169 178428532 -21201618 - THE1B LTR MaLR 0 364 1 23 78 0 0 chr5 178428962 178429013 -21201137 + AT_rich Low_complexity Low_complexity 1 51 0 2923 215 48 25 chr5 178429028 178429669 -21200481 + MER21B LTR ERV1 1 656 -207 330 241 0 0 chr5 178432492 178432600 -21197550 + (TA)n Simple_repeat Simple_repeat 1 108 0 22 0 0 0 chr5 178433636 178433658 -21196492 + AT_rich Low_complexity Low_complexity 1 22 0 235 250 0 0 chr5 178434802 178434850 -21195300 + MER21B LTR ERV1 762 809 -54 313 185 0 31 chr5 178435615 178435680 -21194470 + L2 LINE L2 3251 3313 0 2007 232 56 36 chr5 178436099 178436151 -21193999 - MLT1F1 LTR MaLR -20 547 498 2203 161 59 2 chr5 178436151 178436556 -21193594 + MSTC LTR MaLR 1 428 0 2007 232 56 36 chr5 178436556 178436972 -21193178 - MLT1F1 LTR MaLR -69 498 92 1796 117 87 39 chr5 178436972 178437330 -21192820 + THE1C LTR MaLR 1 375 0 9398 120 39 54 chr5 178437330 178438220 -21191930 + THE1C-int LTR MaLR 1 858 -722 2145 134 0 16 chr5 178438220 178438534 -21191616 + AluSx SINE Alu 1 309 -3 9398 120 39 54 chr5 178438534 178439247 -21190903 + THE1C-int LTR MaLR 858 1580 0 1994 124 55 30 chr5 178439249 178439612 -21190538 + THE1C LTR MaLR 3 374 -1 2007 232 56 36 chr5 178439612 178439672 -21190478 - MLT1F1 LTR MaLR -475 92 3 248 218 0 13 chr5 178439815 178439893 -21190257 + GA-rich Low_complexity Low_complexity 5 81 0 282 300 73 81 chr5 178439977 178440224 -21189926 - MLT1K LTR MaLR -342 246 2 417 20 0 0 chr5 178440235 178440285 -21189865 + (TA)n Simple_repeat Simple_repeat 1 50 0 215 262 49 16 chr5 178440702 178440763 -21189387 + MIR SINE MIR 121 183 -79 788 161 7 21 chr5 178441073 178441216 -21188934 - L1PA16 LINE L1 -9 6157 6017 183 311 0 16 chr5 178441403 178441464 -21188686 - L2 LINE L2 -9 3304 3245 229 227 107 0 chr5 178441498 178441573 -21188577 - Charlie8 DNA MER1_type -2257 160 78 361 278 93 25 chr5 178442066 178442228 -21187922 - MIR SINE MIR -11 251 79 1699 160 115 0 chr5 178444261 178444573 -21185577 + MER7A DNA MER2_type 1 346 0 306 346 22 22 chr5 178444589 178444725 -21185425 + MIR3 SINE MIR 63 198 -10 357 224 133 21 chr5 178444926 178445069 -21185081 + MER117 DNA MER1_type 4 162 -35 22 0 0 0 chr5 178445749 178445771 -21184379 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 178446001 178446024 -21184126 + AT_rich Low_complexity Low_complexity 1 23 0 1904 138 40 57 chr5 178446143 178446513 -21183637 - THE1B LTR MaLR 0 364 1 1229 303 36 39 chr5 178447448 178448009 -21182141 + L2 LINE L2 2132 2690 -624 26 50 0 0 chr5 178448115 178448155 -21181995 + AT_rich Low_complexity Low_complexity 1 40 0 2105 103 0 0 chr5 178448173 178448467 -21181683 - AluY SINE Alu 0 305 12 22 35 0 0 chr5 178448539 178448568 -21181582 + AT_rich Low_complexity Low_complexity 1 29 0 4333 137 30 3 chr5 178449040 178449740 -21180410 - LTR62 LTR ERVK 0 719 1 2002 146 41 24 chr5 178450930 178451299 -21178851 + THE1C LTR MaLR 1 375 0 10177 197 37 68 chr5 178451610 178457262 -21172888 + L1MA4 LINE L1 5 6265 -1300 1404 144 144 27 chr5 178457294 178457592 -21172558 + THE1C LTR MaLR 3 335 -40 12179 126 11 26 chr5 178457592 178460125 -21170025 - L1PA7 LINE L1 -3911 2550 2 20849 98 5 3 chr5 178460129 178463994 -21166156 + L1PA7 LINE L1 2568 6462 -7 319 125 18 18 chr5 178464046 178464102 -21166048 + THE1C LTR MaLR 373 428 0 5322 170 40 5 chr5 178464102 178465508 -21164642 + L1MA4 LINE L1 6263 7710 -9 1260 130 0 16 chr5 178465855 178466040 -21164110 + AluSg SINE Alu 1 182 -128 443 228 55 104 chr5 178466124 178466431 -21163719 + L1MC5 LINE L1 7625 7916 -45 237 65 0 0 chr5 178466538 178466569 -21163581 + (GGA)n Simple_repeat Simple_repeat 3 33 0 998 227 45 56 chr5 178466802 178467307 -21162843 + MER39 LTR ERV1 1 542 0 270 312 0 26 chr5 178467669 178467746 -21162404 + MER89-int LTR ERV1 566 640 -6161 484 193 71 123 chr5 178467846 178468058 -21162092 + MER89-int LTR ERV1 1367 1567 -4764 3830 193 118 69 chr5 178468179 178469350 -21160800 + MER89-int LTR ERV1 292 1519 -3417 1074 129 22 6 chr5 178469374 178469552 -21160598 - L1MA8 LINE L1 -325 5966 5786 258 156 0 0 chr5 178469558 178469603 -21160547 + (CATA)n Simple_repeat Simple_repeat 3 47 0 421 150 20 20 chr5 178469605 178469705 -21160445 + GA-rich Low_complexity Low_complexity 3 102 0 705 159 0 0 chr5 178469705 178469837 -21160313 + L1MA9 LINE L1 6171 6302 -10 24 77 0 0 chr5 178469880 178469932 -21160218 + AT_rich Low_complexity Low_complexity 1 52 0 256 274 12 12 chr5 178470517 178470601 -21159549 + (TATATG)n Simple_repeat Simple_repeat 1 84 0 246 236 22 22 chr5 178470601 178470690 -21159460 + L1MC4 LINE L1 6615 6703 -1339 207 162 0 0 chr5 178470692 178470729 -21159421 + (TATATG)n Simple_repeat Simple_repeat 3 39 0 1529 121 5 9 chr5 178470887 178471111 -21159039 - MER4B LTR ERV1 0 610 388 323 197 8 13 chr5 178471143 178471265 -21158885 - MER4A LTR ERV1 -223 441 262 454 96 169 0 chr5 178471265 178471348 -21158802 - MER4A LTR ERV1 -567 97 1 264 282 77 13 chr5 178471536 178471692 -21158458 - L1M4 LINE L1 -1494 4652 4487 338 243 162 12 chr5 178472335 178472508 -21157642 - L1M4 LINE L1 -2208 3938 3740 22 35 0 0 chr5 178472761 178472790 -21157360 + AT_rich Low_complexity Low_complexity 1 29 0 453 273 72 0 chr5 178473691 178473830 -21156320 + MIR SINE MIR 103 251 -11 236 143 48 0 chr5 178473825 178473867 -21156283 - L2 LINE L2 -7 3306 3263 * 747 250 99 10 chr5 178473902 178474194 -21155956 + L1ME1 LINE L1 4055 4372 -1774 225 250 0 0 chr5 178474311 178474367 -21155783 - L1MC4 LINE L1 -1339 6703 6648 1383 171 151 0 chr5 178474832 178475130 -21155020 - MER2 DNA MER2_type -1 343 1 2710 250 48 16 chr5 178475152 178476078 -21154072 + L1ME1 LINE L1 5208 6161 -5 22 70 0 0 chr5 178476923 178476966 -21153184 + AT_rich Low_complexity Low_complexity 1 43 0 1965 121 13 25 chr5 178477055 178477370 -21152780 - AluSq SINE Alu -2 311 1 30 45 0 0 chr5 178477481 178477525 -21152625 + AT_rich Low_complexity Low_complexity 1 44 0 345 338 155 0 chr5 178477673 178477821 -21152329 - MIR SINE MIR -77 185 15 231 146 0 0 chr5 178478813 178478854 -21151296 + (CA)n Simple_repeat Simple_repeat 2 42 0 29 28 0 0 chr5 178478933 178478969 -21151181 + AT_rich Low_complexity Low_complexity 1 36 0 185 328 49 0 chr5 178479068 178479129 -21151021 - L2 LINE L2 0 3313 3250 273 233 92 67 chr5 178480171 178480291 -21149859 + MIR3 SINE MIR 83 205 -3 2801 198 30 18 chr5 178480409 178481009 -21149141 - L1P LINE L1 -5529 617 11 1959 126 0 0 chr5 178481053 178481315 -21148835 + AluSc SINE Alu 1 262 -47 987 124 41 0 chr5 178481316 178481461 -21148689 - AluSg SINE Alu -159 151 1 1770 170 29 35 chr5 178481852 178482229 -21147921 - THE1C LTR MaLR 0 375 1 8739 155 10 41 chr5 178482229 178483857 -21146293 - THE1C-int LTR MaLR 0 1580 4 1631 175 67 31 chr5 178483860 178484220 -21145930 - THE1C LTR MaLR 0 375 3 1637 170 75 31 chr5 178484766 178485125 -21145025 + THE1C LTR MaLR 1 375 0 8736 155 9 48 chr5 178485127 178486769 -21143381 + THE1C-int LTR MaLR 3 1580 0 1420 142 208 35 chr5 178486771 178487089 -21143061 + THE1C LTR MaLR 3 375 0 920 191 19 0 chr5 178487777 178487934 -21142216 - AluJo SINE Alu -152 160 1 1875 176 3 6 chr5 178488025 178488365 -21141785 - MER46B DNA MER2_type -21 215 2 247 196 71 0 chr5 178488320 178488376 -21141774 + MER46A DNA MER2_type 99 158 -78 * 184 298 18 18 chr5 178488377 178488434 -21141716 - MIR SINE MIR -62 146 90 7390 32 9 9 chr5 178488523 178489702 -21140448 - L1PA4 LINE L1 -3 6152 4974 8145 29 11 0 chr5 178489702 178490679 -21139471 + L1PA4 LINE L1 3998 4985 -1161 1740 132 4 4 chr5 178491496 178491753 -21138397 - AluSq SINE Alu -20 293 37 2308 217 16 8 chr5 178491881 178492369 -21137781 + LTR53 LTR ERVL 8 499 -20 1030 208 82 44 chr5 178492369 178492753 -21137397 + MSTC LTR MaLR 1 428 0 320 394 14 14 chr5 178492905 178493047 -21137103 - MIR SINE MIR -119 143 2 1967 148 10 0 chr5 178493749 178494039 -21136111 - AluSx SINE Alu -19 293 1 288 0 0 0 chr5 178494373 178494405 -21135745 + (CA)n Simple_repeat Simple_repeat 2 33 0 317 382 38 8 chr5 178494526 178494657 -21135493 - L2 LINE L2 -1 3271 3137 274 276 106 50 chr5 178494676 178494853 -21135297 + L2 LINE L2 3102 3293 -20 2611 213 8 55 chr5 178494853 178495486 -21134664 - MER77 LTR ERV1 -2 603 1 274 276 106 50 chr5 178495486 178495507 -21134643 + L2 LINE L2 3293 3311 -2 293 309 177 37 chr5 178495954 178496248 -21133902 - L2 LINE L2 -1 3312 2978 192 269 269 0 chr5 178497909 178498002 -21132148 - L2 LINE L2 -3 3310 3193 1651 232 76 76 chr5 178498997 178499704 -21130446 - MER61E LTR ERV1 -4 773 10 224 245 94 0 chr5 178500314 178500367 -21129783 + MIR SINE MIR 62 119 -143 248 392 20 0 chr5 178500386 178500488 -21129662 - L2 LINE L2 -24 3289 3186 21 0 0 0 chr5 178501678 178501699 -21128451 + AT_rich Low_complexity Low_complexity 1 21 0 232 196 0 0 chr5 178501901 178501947 -21128203 - Alu SINE Alu -9 293 248 951 344 43 38 chr5 178502010 178502575 -21127575 + L2 LINE L2 2568 3144 -169 1444 308 65 40 chr5 178502643 178503243 -21126907 - MER115 DNA AcHobo -48 645 31 230 245 0 0 chr5 178503361 178503414 -21126736 + L2 LINE L2 3261 3313 0 25 0 0 0 chr5 178503425 178503450 -21126700 + AT_rich Low_complexity Low_complexity 1 25 0 1728 144 141 44 chr5 178504028 178504418 -21125732 - MSTA LTR MaLR 0 428 1 375 326 114 70 chr5 178504554 178504956 -21125194 + L2 LINE L2 2552 3002 -311 1656 207 71 3 chr5 178504956 178505294 -21124856 - MLT1A1 LTR MaLR 0 365 5 375 326 114 70 chr5 178505294 178505621 -21124529 + L2 LINE L2 3002 3313 0 276 310 52 43 chr5 178505665 178505781 -21124369 - MIR SINE MIR -116 146 30 960 182 51 28 chr5 178507374 178507588 -21122562 + MER20 DNA MER1_type 1 219 0 2233 101 0 7 chr5 178509506 178509802 -21120348 + AluSq SINE Alu 1 294 -19 22 0 0 0 chr5 178509913 178509935 -21120215 + AT_rich Low_complexity Low_complexity 1 22 0 273 218 77 13 chr5 178510070 178510148 -21120002 + MLT1K LTR MaLR 351 433 -155 201 420 10 40 chr5 178510177 178510377 -21119773 - L2 LINE L2 -528 2786 2593 371 248 109 74 chr5 178510456 178510658 -21119492 + L2 LINE L2 3105 3313 0 2051 101 3 3 chr5 178510692 178510980 -21119170 + AluY SINE Alu 1 288 -23 2000 90 0 87 chr5 178511771 178512094 -21118056 - AluSg SINE Alu -15 295 1 223 286 95 12 chr5 178513856 178513940 -21116210 - MIR SINE MIR -79 129 39 1140 136 15 0 chr5 178515053 178515252 -21114898 + L1MA2 LINE L1 6101 6302 -2 231 283 90 75 chr5 178515391 178515603 -21114547 - L2 LINE L2 -660 2654 2440 313 369 45 34 chr5 178515919 178516095 -21114055 - MIR3 SINE MIR -25 183 6 347 240 143 29 chr5 178516330 178516505 -21113645 - MIR SINE MIR -34 228 34 378 248 43 64 chr5 178517595 178517736 -21112414 - MER63 DNA MER1_type -272 790 27 720 233 0 27 chr5 178518043 178518193 -21111957 - MER5A DNA MER1_type -43 146 1 22 0 0 0 chr5 178518234 178518256 -21111894 + AT_rich Low_complexity Low_complexity 1 22 0 1868 150 23 3 chr5 178518292 178518592 -21111558 + AluSx SINE Alu 1 306 -6 240 86 0 0 chr5 178518731 178518766 -21111384 + (TC)n Simple_repeat Simple_repeat 2 36 0 333 93 0 0 chr5 178518774 178518828 -21111322 + (CA)n Simple_repeat Simple_repeat 2 55 0 378 266 42 42 chr5 178519198 178519341 -21110809 - L2 LINE L2 -6 3307 3165 223 285 89 79 chr5 178519551 178519842 -21110308 - L2 LINE L2 -339 2975 2682 378 226 57 0 chr5 178519842 178519948 -21110202 + Charlie5 DNA MER1_type 2450 2561 -51 974 219 88 0 chr5 178520207 178520490 -21109660 - MER33 DNA MER1_type -16 308 1 188 377 85 9 chr5 178520491 178520597 -21109553 + MIR SINE MIR 32 145 -63 21 0 0 0 chr5 178520930 178520951 -21109199 + AT_rich Low_complexity Low_complexity 1 21 0 1436 204 3 39 chr5 178521222 178521531 -21108619 - AluJo SINE Alu -14 298 1 3556 163 25 57 chr5 178522028 178522779 -21107371 - L1MB3 LINE L1 -40 6143 5417 313 167 0 19 chr5 178522903 178522957 -21107193 + Tigger5 DNA MER2_type 3 55 -2268 511 186 0 0 chr5 178522967 178523053 -21107097 + Tigger5 DNA MER2_type 2237 2322 -1 247 268 31 93 chr5 178523065 178523162 -21106988 + MLT1H LTR MaLR 255 345 -204 1419 223 69 35 chr5 178524757 178525110 -21105040 + Charlie4a DNA MER1_type 14 389 -1572 2807 3 0 3 chr5 178525110 178525416 -21104734 - AluY SINE Alu -6 305 1 1419 223 69 35 chr5 178525416 178525541 -21104609 + Charlie4a DNA MER1_type 389 508 0 2496 103 19 5 chr5 178526444 178526812 -21103338 - THE1C LTR MaLR -2 373 1 1421 194 104 24 chr5 178526824 178527160 -21102990 - MLT1A1 LTR MaLR 0 365 3 251 245 78 29 chr5 178528718 178528749 -21101401 + MER96 DNA MER1_type? 63 91 -84 1947 155 0 3 chr5 178528749 178529045 -21101105 + AluSx SINE Alu 3 297 -15 251 245 78 29 chr5 178529045 178529115 -21101035 + MER96 DNA MER1_type? 91 169 -6 189 373 133 19 chr5 178529182 178529340 -21100810 + MER5A DNA MER1_type 1 176 -13 2207 104 0 10 chr5 178529439 178529736 -21100414 + AluY SINE Alu 1 294 -17 2185 97 0 3 chr5 178531001 178531289 -21098861 + AluY SINE Alu 3 289 -22 693 299 122 20 chr5 178531503 178531847 -21098303 - MLT1K LTR MaLR -135 453 75 195 42 0 0 chr5 178532243 178532267 -21097883 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 277 274 85 120 chr5 178532414 178532673 -21097477 - MLT1J LTR MaLR -227 284 35 182 274 20 0 chr5 178533150 178533201 -21096949 + MIR SINE MIR 73 124 -84 310 307 38 28 chr5 178533249 178533437 -21096713 - MER5A DNA MER1_type -32 292 6 1692 185 7 0 chr5 178533521 178533807 -21096343 - AluJb SINE Alu -24 288 1 24 0 0 0 chr5 178533824 178533848 -21096302 + AT_rich Low_complexity Low_complexity 1 24 0 236 304 0 0 chr5 178533950 178534006 -21096144 + polypyrimidine Low_complexity Low_complexity 1 56 0 3961 56 2 0 chr5 178535215 178535715 -21094435 + L1PA8 LINE L1 5658 6158 -14 336 48 0 0 chr5 178535860 178535902 -21094248 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 514 271 110 41 chr5 178537546 178538182 -21091968 - L1ME2 LINE L1 -280 5884 5170 1933 105 4 4 chr5 178538191 178538458 -21091692 + AluSg SINE Alu 22 288 -22 588 301 139 30 chr5 178538854 178539193 -21090957 + L2 LINE L2 2938 3313 0 686 155 23 16 chr5 178539481 178539783 -21090367 + GA-rich Low_complexity Low_complexity 1 304 0 252 59 0 0 chr5 178541254 178541288 -21088862 + (CA)n Simple_repeat Simple_repeat 1 34 0 216 143 0 0 chr5 178541301 178541343 -21088807 + (GA)n Simple_repeat Simple_repeat 2 43 0 596 332 106 40 chr5 178541589 178542014 -21088136 - Charlie8 DNA MER1_type -1929 488 36 198 214 155 48 chr5 178542077 178542161 -21087989 + MIR SINE MIR 49 141 -121 332 206 0 0 chr5 178542489 178542562 -21087588 - MLT1L LTR MaLR -17 598 526 262 239 28 28 chr5 178542830 178542901 -21087249 - MLT1K LTR MaLR -375 213 143 2430 197 16 35 chr5 178542998 178543491 -21086659 - MLT2B3 LTR ERVL 0 554 71 1082 200 59 5 chr5 178543582 178543646 -21086504 - Ricksha DNA DNA -1630 416 341 1496 168 4 4 chr5 178543646 178543908 -21086242 - ERVL-B3 LTR ERVL 0 5764 5503 2104 106 3 0 chr5 178544013 178544340 -21085810 - AluSp SINE Alu 0 328 1 407 91 0 0 chr5 178544429 178544484 -21085666 + Alu SINE Alu 1 55 -247 225 214 0 18 chr5 178544606 178544662 -21085488 + L1MC4 LINE L1 6648 6702 -1340 225 214 0 18 chr5 178544692 178544748 -21085402 + L1MC4 LINE L1 6648 6702 -1340 225 214 0 18 chr5 178544778 178544834 -21085316 + L1MC4 LINE L1 6648 6702 -1340 225 214 0 18 chr5 178544821 178544877 -21085273 + L1MC4 LINE L1 6648 6702 -1340 225 214 0 18 chr5 178544907 178544963 -21085187 + L1MC4 LINE L1 6648 6702 -1340 316 299 28 9 chr5 178545014 178545121 -21085029 + L1MC4 LINE L1 6595 6703 -1339 191 143 0 24 chr5 178545426 178545468 -21084682 + (TCCA)n Simple_repeat Simple_repeat 1 41 0 2177 125 3 0 chr5 178546021 178546318 -21083832 + AluSx SINE Alu 2 299 -13 26 50 0 0 chr5 178546436 178546476 -21083674 + AT_rich Low_complexity Low_complexity 1 40 0 398 225 106 83 chr5 178546520 178546738 -21083412 + MER39-int LTR ERV1 1532 1754 -3182 37 23 0 0 chr5 178546743 178546787 -21083363 + AT_rich Low_complexity Low_complexity 1 44 0 291 215 70 44 chr5 178546838 178546996 -21083154 + MER39-int LTR ERV1 1802 1963 -2973 811 250 55 5 chr5 178547029 178547249 -21082901 + MER39-int LTR ERV1 1938 2168 -2768 1076 118 31 0 chr5 178547297 178547458 -21082692 - MER41D LTR ERV1 -391 166 1 279 0 0 0 chr5 178547581 178547612 -21082538 + (TTA)n Simple_repeat Simple_repeat 3 33 0 3712 27 0 0 chr5 178547612 178548050 -21082100 - L1PA4 LINE L1 -18 6137 5700 5563 198 54 71 chr5 178548070 178548178 -21081972 + MER39-int LTR ERV1 3313 3421 -2910 3355 161 9 0 chr5 178548178 178548730 -21081420 - MER41D LTR ERV1 0 557 1 5563 198 54 71 chr5 178548730 178550253 -21079897 + MER39-int LTR ERV1 3421 6186 -145 611 267 91 60 chr5 178550310 178550787 -21079363 + MER39 LTR ERV1 5 542 0 22 0 0 0 chr5 178550972 178550994 -21079156 + AT_rich Low_complexity Low_complexity 1 22 0 9233 176 21 4 chr5 178553570 178555411 -21074739 - L1 LINE L1 -1299 4847 2975 440 272 92 44 chr5 178555516 178555810 -21074340 + L1ME4a LINE L1 5575 5825 -296 1164 336 63 22 chr5 178555920 178556822 -21073328 + L1MEc LINE L1 334 1272 -5291 655 194 92 114 chr5 178556953 178557048 -21073102 + L1MA9 LINE L1 6008 6104 -208 2520 113 0 8 chr5 178557048 178557437 -21072713 + L1PB1 LINE L1 5762 6147 -4 655 194 92 114 chr5 178557437 178557614 -21072536 + L1MA9 LINE L1 6104 6274 -38 * 689 299 139 33 chr5 178557601 178558326 -21071824 + L1MEc LINE L1 1202 2110 -4453 417 273 67 5 chr5 178558348 178558557 -21071593 + L1MEc LINE L1 2170 2391 -4172 222 116 0 0 chr5 178608650 178608693 -21021457 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 25 0 0 0 chr5 178608956 178608981 -21021169 + AT_rich Low_complexity Low_complexity 1 25 0 1557 113 22 13 chr5 178611218 178611448 -21018702 + AluSg/x SINE Alu 80 311 -1 223 255 145 35 chr5 178611801 178611946 -21018204 + L2 LINE L2 2989 3149 -164 205 29 59 0 chr5 178613054 178613088 -21017062 + (GAA)n Simple_repeat Simple_repeat 2 37 0 225 191 0 0 chr5 178613283 178613330 -21016820 + A-rich Low_complexity Low_complexity 4 50 0 201 78 39 39 chr5 178615170 178615221 -21014929 + (CACAA)n Simple_repeat Simple_repeat 3 53 0 240 211 32 21 chr5 178624576 178624671 -21005479 + (CA)n Simple_repeat Simple_repeat 1 96 0 207 0 0 0 chr5 178628588 178628611 -21001539 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 35 24 0 0 chr5 178635344 178635386 -20994764 + AT_rich Low_complexity Low_complexity 1 42 0 201 236 0 14 chr5 178635996 178636068 -20994082 + (TTGG)n Simple_repeat Simple_repeat 1 71 0 591 217 80 9 chr5 178642190 178642402 -20987748 + HERVH LTR ERV1 4586 4812 -2901 * 5352 129 22 1 chr5 178642401 178643291 -20986859 + HERVH LTR ERV1 5108 6016 -1697 3503 95 9 28 chr5 178643284 178643852 -20986298 + HERVH LTR ERV1 7157 7713 0 * 419 158 110 8 chr5 178643852 178643984 -20986166 + LTR7 LTR ERV1 1 206 -244 613 319 8 17 chr5 178645187 178645428 -20984722 + L2 LINE L2 1715 1953 -1361 24 0 0 0 chr5 178647502 178647526 -20982624 + AT_rich Low_complexity Low_complexity 1 24 0 5550 25 3 0 chr5 178648331 178649020 -20981130 + L1PA4 LINE L1 5497 6187 0 24 32 0 0 chr5 178649055 178649086 -20981064 + AT_rich Low_complexity Low_complexity 1 31 0 231 307 34 39 chr5 178650196 178650375 -20979775 + MLT1K LTR MaLR 392 569 -19 438 375 33 5 chr5 178650394 178650578 -20979572 - MIR SINE MIR -66 196 8 217 299 63 116 chr5 178650905 178651206 -20978944 - L2 LINE L2 -2807 507 223 379 276 8 45 chr5 178651875 178652009 -20978141 + MER5A DNA MER1_type 37 165 -24 346 307 105 34 chr5 178652170 178652408 -20977742 + MIR SINE MIR 3 261 -1 422 289 58 0 chr5 178653456 178653577 -20976573 + MIR SINE MIR 22 149 -113 230 91 0 0 chr5 178653577 178653610 -20976540 - MLT1A2 LTR MaLR 0 374 342 2530 210 32 32 chr5 178654029 178654738 -20975412 - L1ME1 LINE L1 -10 6156 5448 251 150 17 0 chr5 178654744 178654804 -20975346 + CT-rich Low_complexity Low_complexity 2 62 0 21 36 0 0 chr5 178655073 178655101 -20975049 + AT_rich Low_complexity Low_complexity 1 28 0 1758 88 4 0 chr5 178655121 178655349 -20974801 + AluSg SINE Alu 1 229 -81 2055 212 19 64 chr5 178657033 178657608 -20972542 - MLT2B3 LTR ERVL 0 554 6 334 317 90 6 chr5 178657912 178658079 -20972071 - MIR SINE MIR -3 259 79 332 266 43 71 chr5 178658935 178659119 -20971031 - MIR SINE MIR -83 179 1 339 272 10 10 chr5 178659299 178659402 -20970748 - LTR33 LTR ERVL 0 521 419 822 206 17 6 chr5 178659402 178659603 -20970547 - MLT1B LTR MaLR 0 390 173 452 156 32 26 chr5 178659604 178659758 -20970392 + GA-rich Low_complexity Low_complexity 1 155 0 774 208 27 16 chr5 178659758 178659941 -20970209 - MLT1B LTR MaLR -189 185 1 695 290 122 24 chr5 178660269 178660597 -20969553 + MLT1I LTR MaLR 42 401 -8 353 39 20 0 chr5 178661262 178661313 -20968837 + (TA)n Simple_repeat Simple_repeat 2 53 0 342 0 0 0 chr5 178661377 178661415 -20968735 + (TG)n Simple_repeat Simple_repeat 1 38 0 665 263 15 83 chr5 178661587 178661853 -20968297 + L2 LINE L2 2343 2590 -724 3033 82 19 0 chr5 178662022 178662438 -20967712 + L1PA10 LINE L1 5743 6166 -2 323 355 7 7 chr5 178662547 178662685 -20967465 + L2 LINE L2 2577 2714 -600 1723 186 18 34 chr5 178662686 178663072 -20967078 + MER31B LTR ERV1 3 382 -84 640 310 49 85 chr5 178663076 178663644 -20966506 + L2 LINE L2 2656 3201 -112 2246 128 0 0 chr5 178663644 178663941 -20966209 + AluSx SINE Alu 1 297 -15 640 310 49 85 chr5 178663941 178664051 -20966099 + L2 LINE L2 3201 3313 0 754 277 84 20 chr5 178664053 178664493 -20965657 + MER113 DNA MER1_type? 47 514 -7 976 155 0 0 chr5 178664820 178664975 -20965175 + AluSg/x SINE Alu 145 299 -13 349 354 97 6 chr5 178665684 178665859 -20964291 + MIR SINE MIR 60 250 -12 1110 146 55 146 chr5 178665889 178666217 -20963933 + AluJo SINE Alu 3 300 -2 270 315 0 0 chr5 178666375 178666448 -20963702 + L2 LINE L2 2988 3060 -253 180 139 28 0 chr5 178666655 178666691 -20963459 + L2 LINE L2 3276 3312 -1 28 48 0 0 chr5 178666757 178666799 -20963351 + AT_rich Low_complexity Low_complexity 1 42 0 415 241 16 60 chr5 178667152 178667368 -20962782 + L1MCa LINE L1 43 176 -5869 377 171 13 0 chr5 178667405 178667481 -20962669 - MLT1E2 LTR MaLR -1 625 549 384 173 127 0 chr5 178667483 178667593 -20962557 + L1MC3 LINE L1 6980 7103 -682 226 250 0 60 chr5 178667596 178667680 -20962470 + MLT1L LTR MaLR 45 123 -444 2231 184 65 23 chr5 178667681 178668262 -20961888 + L1MC3 LINE L1 6110 6344 0 862 284 39 37 chr5 178668712 178669121 -20961029 + MLT1L LTR MaLR 201 610 -5 304 346 39 32 chr5 178669317 178669473 -20960677 + MER5B DNA MER1_type 22 178 0 27 49 0 0 chr5 178669841 178669882 -20960268 + AT_rich Low_complexity Low_complexity 1 41 0 284 242 40 30 chr5 178670170 178670269 -20959881 - L2 LINE L2 0 3313 3214 2066 165 46 13 chr5 178670290 178670680 -20959470 + MSTB LTR MaLR 1 403 -23 1418 106 60 0 chr5 178670680 178670897 -20959253 - MER30 DNA MER1_type 0 230 1 3141 286 76 64 chr5 178671047 178671240 -20958910 - L2 LINE L2 -201 3112 2923 2258 106 13 0 chr5 178671240 178671541 -20958609 - AluSp SINE Alu -8 305 1 3141 286 76 64 chr5 178671541 178672990 -20957160 - L2 LINE L2 -390 2923 1447 5168 165 20 17 chr5 178673367 178675021 -20955129 - L1MA8 LINE L1 -23 6268 4614 17915 90 16 9 chr5 178676345 178679088 -20951062 - L1PA6 LINE L1 -2338 3808 1046 11769 69 20 17 chr5 178679089 178680767 -20949383 + L1PA6 LINE L1 3796 5497 -657 2346 90 0 0 chr5 178680767 178681067 -20949083 + AluY SINE Alu 1 300 -11 11769 69 20 17 chr5 178681067 178681726 -20948424 + L1PA6 LINE L1 5497 6152 -2 810 332 62 6 chr5 178682746 178683086 -20947064 + LTR16A LTR ERVL 86 444 -6 959 319 44 41 chr5 178683127 178683683 -20946467 + HERV16 LTR ERVL 37 598 -4398 2157 108 0 11 chr5 178683683 178683993 -20946157 + AluSx SINE Alu 1 307 0 959 319 44 41 chr5 178683993 178684043 -20946107 + HERV16 LTR ERVL 598 646 -4350 2252 108 3 10 chr5 178684044 178684358 -20945792 + AluSp SINE Alu 1 312 -1 1160 196 18 9 chr5 178684419 178684745 -20945405 - L1MEc LINE L1 -3945 2451 2123 248 260 27 0 chr5 178684907 178684980 -20945170 - L1MEc LINE L1 -6293 103 29 898 334 70 18 chr5 178685089 178685547 -20944603 + HERVL LTR ERVL 4121 4602 -1052 669 345 34 29 chr5 178685572 178685954 -20944196 + HERVL LTR ERVL 4710 5093 -671 872 292 62 66 chr5 178686318 178686757 -20943393 + LTR16A LTR ERVL 7 443 -7 480 347 42 24 chr5 178686907 178687374 -20942776 + MLT1K LTR MaLR 43 553 -35 258 289 94 27 chr5 178687777 178687926 -20942224 + MIR SINE MIR 104 262 0 198 336 69 35 chr5 178688296 178688412 -20941738 + L2 LINE L2 3141 3260 -12 1408 203 24 17 chr5 178688644 178688939 -20941211 - AluJo SINE Alu -13 299 3 24 0 0 0 chr5 178689042 178689066 -20941084 + AT_rich Low_complexity Low_complexity 1 24 0 201 127 63 32 chr5 178689225 178689288 -20940862 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 360 0 0 0 chr5 178689307 178689347 -20940803 + (CA)n Simple_repeat Simple_repeat 1 40 0 455 261 155 38 chr5 178689646 178690082 -20940068 - L1MC4a LINE L1 -464 5657 5405 332 265 69 87 chr5 178690381 178690554 -20939596 - MIR SINE MIR -63 145 23 711 199 22 0 chr5 178690982 178691118 -20939032 - MER105 DNA DNA -65 139 1 217 291 35 70 chr5 178691543 178691629 -20938521 - MIR SINE MIR -152 110 28 543 151 28 19 chr5 178692170 178692276 -20937874 + LTR43 LTR ERV1 176 282 -320 1694 141 3 42 chr5 178692514 178692826 -20937324 + AluSx SINE Alu 3 302 -10 237 177 0 32 chr5 178693632 178693694 -20936456 + (TATATG)n Simple_repeat Simple_repeat 1 60 0 1446 191 46 32 chr5 178694876 178695159 -20934991 - AluJo SINE Alu -25 287 1 4086 197 34 28 chr5 178696477 178697323 -20932827 - MER21B LTR ERV1 -11 852 2 299 95 0 0 chr5 178697830 178697872 -20932278 + Tigger5 DNA MER2_type 15 56 -2267 458 158 24 0 chr5 178697875 178697957 -20932193 + Tigger5 DNA MER2_type 2231 2314 -9 3227 58 0 5 chr5 178698271 178698682 -20931468 - L1PA7 LINE L1 -2 6152 5744 529 227 47 35 chr5 178699465 178699637 -20930513 - MLT1K LTR MaLR -18 570 397 1758 129 108 0 chr5 178699802 178700080 -20930070 - AluSx SINE Alu -4 308 1 1278 165 0 24 chr5 178700126 178700338 -20929812 + AluSx SINE Alu 3 209 -103 379 98 0 0 chr5 178700341 178700392 -20929758 + L1PA6 LINE L1 5 55 -6091 38521 74 2 3 chr5 178700394 178706335 -20923815 + L1PA6 LINE L1 221 6154 0 642 162 0 17 chr5 178706335 178706452 -20923698 + AluSx SINE Alu 190 304 -6 400 343 134 9 chr5 178706604 178706820 -20923330 + MIR SINE MIR 20 262 0 2241 119 0 0 chr5 178706981 178707283 -20922867 + AluSx SINE Alu 1 302 -10 1756 168 7 7 chr5 178707326 178707618 -20922532 - AluJo SINE Alu -14 298 7 310 322 0 0 chr5 178708205 178708292 -20921858 - MIR3 SINE MIR -3 205 119 226 260 77 58 chr5 178709098 178709202 -20920948 + L1M4b LINE L1 159 264 -6595 2582 33 0 3 chr5 178709347 178709651 -20920499 + AluY SINE Alu 1 303 -8 266 310 195 10 chr5 178709709 178710006 -20920144 + L1M4b LINE L1 837 1188 -5667 708 45 0 0 chr5 178710048 178710136 -20920014 + (GGAA)n Simple_repeat Simple_repeat 1 88 0 22 0 0 0 chr5 178711135 178711157 -20918993 + AT_rich Low_complexity Low_complexity 1 22 0 321 261 33 0 chr5 178712128 178712220 -20917930 + L1MC4a LINE L1 5355 5449 -2336 351 271 23 15 chr5 178712411 178712544 -20917606 + L1MC4a LINE L1 5752 5885 -1923 22 0 0 0 chr5 178713402 178713424 -20916726 + AT_rich Low_complexity Low_complexity 1 22 0 320 314 127 27 chr5 178713841 178714061 -20916089 - MIR SINE MIR -19 243 2 1294 82 174 0 chr5 178714328 178714524 -20915626 - MER30 DNA MER1_type 0 230 1 1261 151 19 0 chr5 178714681 178714893 -20915257 + MER20 DNA MER1_type 1 216 -3 311 262 187 43 chr5 178714898 178715039 -20915111 + L1ME2 LINE L1 5651 5827 -294 1855 100 89 7 chr5 178715039 178715319 -20914831 + AluSc SINE Alu 1 303 -6 311 262 187 43 chr5 178715319 178715364 -20914786 + L1ME2 LINE L1 5827 5864 -257 337 233 0 0 chr5 178716982 178717055 -20913095 - MER3 DNA MER1_type -125 84 12 448 279 46 64 chr5 178717282 178717501 -20912649 + MIR SINE MIR 11 225 -37 381 296 129 41 chr5 178717737 178718031 -20912119 + HAL1 LINE L1 778 1097 -1410 24 32 0 0 chr5 178718623 178718654 -20911496 + AT_rich Low_complexity Low_complexity 1 31 0 410 334 113 26 chr5 178718664 178719194 -20910956 + L1 LINE L1 2250 2825 -3321 226 233 50 0 chr5 178719232 178719292 -20910858 + L1MC3 LINE L1 7051 7113 -672 332 229 0 14 chr5 178719292 178719362 -20910788 + MLT1F1 LTR MaLR 57 125 -442 1875 200 143 14 chr5 178719365 178719881 -20910269 + L1MC3 LINE L1 7196 7778 -7 24 0 0 0 chr5 178719881 178719905 -20910245 + AT_rich Low_complexity Low_complexity 1 24 0 734 239 18 49 chr5 178719905 178720179 -20909971 + L1ME2 LINE L1 5875 6142 -22 2015 160 0 0 chr5 178720191 178720491 -20909659 + AluSx SINE Alu 1 300 -12 260 360 119 38 chr5 178721006 178721401 -20908749 - L2 LINE L2 -2816 498 72 2045 112 7 0 chr5 178721500 178721837 -20908313 + AluSg SINE Alu 1 339 0 376 254 42 69 chr5 178721882 178722071 -20908079 + L1 LINE L1 3137 3320 -2826 1774 246 90 14 chr5 178722081 178722513 -20907637 - L1MC5 LINE L1 -27 7934 7427 207 0 0 0 chr5 178722513 178722536 -20907614 + (TTG)n Simple_repeat Simple_repeat 1 23 0 1774 246 90 14 chr5 178722536 178722801 -20907349 - L1MC5 LINE L1 -534 7427 7184 24 0 0 0 chr5 178722805 178722829 -20907321 + AT_rich Low_complexity Low_complexity 1 24 0 330 307 87 20 chr5 178723037 178723291 -20906859 + L1P LINE L1 3566 3836 -2310 799 307 139 35 chr5 178723367 178724164 -20905986 + L1 LINE L1 4172 5051 -1095 395 335 50 17 chr5 178724555 178724734 -20905416 + MIR SINE MIR 34 218 -44 226 136 0 68 chr5 178724852 178724896 -20905254 - MIR SINE MIR -57 151 111 239 295 74 11 chr5 178726508 178726603 -20903547 - MIR SINE MIR -74 188 88 2225 92 0 0 chr5 178726736 178727019 -20903131 + AluSx SINE Alu 30 312 0 181 309 99 0 chr5 178727072 178727153 -20902997 - MIR SINE MIR -80 128 40 546 303 103 13 chr5 178727172 178727406 -20902744 + MIR SINE MIR 8 262 0 294 87 0 0 chr5 178727621 178727667 -20902483 + (TC)n Simple_repeat Simple_repeat 2 47 0 228 67 0 0 chr5 178727667 178727697 -20902453 + (CA)n Simple_repeat Simple_repeat 1 30 0 24 0 0 0 chr5 178727843 178727867 -20902283 + AT_rich Low_complexity Low_complexity 1 24 0 2594 195 74 25 chr5 178728124 178728730 -20901420 - LTR27 LTR ERV1 0 636 1 2582 102 3 2 chr5 178728739 178729400 -20900750 - MER41B LTR ERV1 -22 757 1 * 4765 140 47 6 chr5 178729400 178730189 -20899961 - MER4D LTR ERV1 -82 821 1 1448 174 8 0 chr5 178730503 178730744 -20899406 + MER57A LTR ERV1 3 245 -158 429 65 0 0 chr5 178730745 178730807 -20899343 + MER57B LTR ERV1 373 434 0 2559 136 64 11 chr5 178731051 178731491 -20898659 + LTR24 LTR ERV1 5 467 0 208 307 86 71 chr5 178731518 178731658 -20898492 - MIR3 SINE MIR -51 157 16 233 213 82 90 chr5 178731735 178731881 -20898269 - HsTC2 DNA Tc2 -34 1864 1 530 225 56 66 chr5 178732186 178732399 -20897751 - L2 LINE L2 -2 3311 3101 36 40 0 0 chr5 178733065 178733115 -20897035 + AT_rich Low_complexity Low_complexity 1 50 0 421 219 66 13 chr5 178733201 178733352 -20896798 + L1ME LINE L1 816 974 -5096 438 324 86 6 chr5 178733512 178733827 -20896323 - L1ME LINE L1 -302 5819 5480 22 0 0 0 chr5 178733961 178733983 -20896167 + AT_rich Low_complexity Low_complexity 1 22 0 289 302 62 45 chr5 178734635 178734814 -20895336 + L1ME LINE L1 295 476 -5594 1356 242 71 50 chr5 178734845 178735511 -20894639 + L1ME LINE L1 410 1089 -4981 1111 96 6 0 chr5 178735536 178735692 -20894458 + L1PA10 LINE L1 6009 6165 -3 307 323 14 42 chr5 178735696 178735981 -20894169 - L1ME4a LINE L1 -70 6051 5775 769 107 18 0 chr5 178735988 178736123 -20894027 - AluSg/x SINE Alu 0 305 169 4696 25 0 5 chr5 178736195 178736739 -20893411 + L1PA3 LINE L1 5602 6144 -11 190 0 0 0 chr5 178736739 178736760 -20893390 + (TAAAA)n Simple_repeat Simple_repeat 4 160 0 302 0 26 0 chr5 178736788 178736826 -20893324 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2169 178 21 0 chr5 178736922 178737305 -20892845 + MSTB LTR MaLR 1 391 -35 188 292 0 0 chr5 178737346 178737394 -20892756 - L2 LINE L2 -4 3309 3262 2567 71 0 0 chr5 178738336 178738647 -20891503 + AluY SINE Alu 1 311 0 761 61 272 0 chr5 178738671 178738818 -20891332 - MER53 DNA DNA -2 187 1 346 299 67 15 chr5 178738922 178739056 -20891094 + L3 LINE CR1 1403 1543 -34 2116 52 59 14 chr5 178739944 178740230 -20889920 + AluY SINE Alu 1 299 -12 2100 126 3 3 chr5 178740361 178740662 -20889488 + AluJb SINE Alu 1 301 -11 29 0 0 0 chr5 178740662 178740691 -20889459 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr5 178740748 178740772 -20889378 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 976 307 60 19 chr5 178740775 178741205 -20888945 - L2 LINE L2 -27 3286 2839 183 387 24 65 chr5 178741225 178741393 -20888757 + L2 LINE L2 3103 3263 -9 611 336 28 8 chr5 178741477 178741727 -20888423 - MIR SINE MIR -1 261 7 303 320 0 0 chr5 178742534 178742612 -20887538 + L2 LINE L2 3194 3271 -1 261 0 0 0 chr5 178742826 178742840 -20887310 + (CA)n Simple_repeat Simple_repeat 1 43 0 261 0 0 0 chr5 178742840 178742869 -20887281 + (CA)n Simple_repeat Simple_repeat 2 30 0 2389 88 0 0 chr5 178743137 178743434 -20886716 + AluSx SINE Alu 15 311 -1 227 222 0 14 chr5 178743467 178743539 -20886611 + GA-rich Low_complexity Low_complexity 3 73 0 396 300 36 8 chr5 178744178 178744333 -20885817 - MLT1E1 LTR MaLR -263 391 201 196 346 51 0 chr5 178744785 178744863 -20885287 - MIR SINE MIR -108 154 73 2319 98 0 0 chr5 178745173 178745470 -20884680 + AluSg SINE Alu 1 297 -13 2396 121 0 5 chr5 178745748 178745775 -20884375 - L1PA14 LINE L1 -190 5971 5945 880 115 0 0 chr5 178745775 178745905 -20884245 - L1PA13 LINE L1 -2 6161 6032 2396 121 0 5 chr5 178745905 178746258 -20883892 - L1PA14 LINE L1 -216 5945 5593 215 274 16 0 chr5 178746372 178746434 -20883716 + (TAA)n Simple_repeat Simple_repeat 3 65 0 231 152 0 0 chr5 178747304 178747350 -20882800 + (TA)n Simple_repeat Simple_repeat 2 47 0 196 300 33 22 chr5 178748146 178748236 -20881914 + MIR SINE MIR 37 127 -81 562 341 61 55 chr5 178748424 178748850 -20881300 - L2 LINE L2 0 3272 2848 233 333 85 85 chr5 178751288 178751389 -20878761 - L2 LINE L2 -209 3063 2960 2503 65 0 13 chr5 178751389 178751696 -20878454 - AluY SINE Alu -8 303 1 233 333 85 85 chr5 178751696 178751783 -20878367 - L2 LINE L2 -311 2961 2875 1998 151 0 3 chr5 178751785 178752089 -20878061 - AluJb SINE Alu -9 303 1 2777 114 28 12 chr5 178752195 178752375 -20877775 + L1PB3 LINE L1 5219 5395 -759 2224 104 14 0 chr5 178752375 178752672 -20877478 + AluSx SINE Alu 3 303 -9 2777 114 28 12 chr5 178752672 178752993 -20877157 + L1PB3 LINE L1 5395 5728 -426 933 158 12 18 chr5 178752993 178753147 -20877003 + L1PB3 LINE L1 5985 6154 0 293 95 27 27 chr5 178753209 178753283 -20876867 + (TA)n Simple_repeat Simple_repeat 2 75 0 2236 115 7 0 chr5 178753299 178753594 -20876556 - AluSq SINE Alu -16 297 1 274 319 0 11 chr5 178754310 178754404 -20875746 - MLT1K LTR MaLR -494 94 2 598 271 26 82 chr5 178754522 178754641 -20875509 + MIR SINE MIR 8 132 -130 1460 203 23 8 chr5 178754641 178754907 -20875243 - AluJo SINE Alu -14 298 29 598 271 26 82 chr5 178754907 178755056 -20875094 + MIR SINE MIR 132 261 -1 1694 200 58 29 chr5 178757031 178757482 -20872668 - MLT1C LTR MaLR -2 465 2 22 0 0 0 chr5 178758379 178758401 -20871749 + AT_rich Low_complexity Low_complexity 1 22 0 2098 132 0 0 chr5 178758402 178758716 -20871434 + AluSq SINE Alu 1 314 0 514 211 124 72 chr5 178759447 178759605 -20870545 + MER20 DNA MER1_type 6 177 -42 1946 154 0 19 chr5 178759605 178759917 -20870233 + AluSx SINE Alu 3 308 -4 514 211 124 72 chr5 178759917 178759952 -20870198 + MER20 DNA MER1_type 177 209 -10 35 24 0 0 chr5 178760039 178760081 -20870069 + AT_rich Low_complexity Low_complexity 1 42 0 876 144 6 52 chr5 178760387 178760560 -20869590 + FRAM SINE Alu 1 40 0 193 29 59 0 chr5 178760753 178760787 -20869363 + (CAA)n Simple_repeat Simple_repeat 1 36 0 575 234 174 36 chr5 178762666 178763029 -20867121 - MER113 DNA MER1_type? -29 492 80 1282 225 63 14 chr5 178763084 178763253 -20866897 - AluJo SINE Alu -13 299 109 459 0 0 0 chr5 178763253 178763304 -20866846 + (TG)n Simple_repeat Simple_repeat 2 52 0 1282 225 63 14 chr5 178763304 178763419 -20866731 - AluJo SINE Alu -203 109 1 297 265 44 65 chr5 178763422 178763500 -20866650 + L1ME4a LINE L1 5641 5719 -402 3315 139 25 2 chr5 178763500 178764011 -20866139 - MER1A DNA MER1_type -4 523 1 297 265 44 65 chr5 178764011 178764314 -20865836 + L1ME4a LINE L1 5719 6013 -108 1155 251 69 52 chr5 178764498 178764993 -20865157 + HAL1 LINE L1 43 545 -1962 291 257 154 51 chr5 178765033 178765208 -20864942 + HAL1 LINE L1 764 956 -1551 226 246 0 16 chr5 178765283 178765344 -20864806 + A-rich Low_complexity Low_complexity 4 63 0 231 240 0 0 chr5 178765358 178765408 -20864742 + (TA)n Simple_repeat Simple_repeat 1 50 0 207 0 0 0 chr5 178765412 178765435 -20864715 + (TG)n Simple_repeat Simple_repeat 2 24 0 249 194 16 0 chr5 178765437 178765499 -20864651 + HAL1 LINE L1 1097 1159 -1348 862 281 70 27 chr5 178766574 178767019 -20863131 - HAL1 LINE L1 -2042 465 2 1733 140 30 124 chr5 178767792 178768379 -20861771 + MLT2A2 LTR ERVL 2 553 -1 4103 39 17 0 chr5 178768707 178769189 -20860961 - LTR2B LTR ERV1 0 490 1 23307 113 8 5 chr5 178769189 178772726 -20857424 - Harlequin LTR ERV1 0 6896 3352 6435 64 24 6 chr5 178772725 178773710 -20856440 - Harlequin LTR ERV1 -4322 2574 1572 * 4358 77 13 16 chr5 178773703 178774337 -20855813 - Harlequin LTR ERV1 -6003 893 262 * 2522 101 5 0 chr5 178774332 178774710 -20855440 - Harlequin LTR ERV1 -6516 380 1 * 3684 62 27 12 chr5 178774710 178775145 -20855005 - LTR2B LTR ERV1 0 490 46 2642 15 0 67 chr5 178775145 178775476 -20854674 + AluYb8 SINE Alu 1 309 -9 3684 62 27 12 chr5 178775476 178775523 -20854627 - LTR2B LTR ERV1 -444 46 1 2445 70 0 0 chr5 178776285 178776583 -20853567 + AluY SINE Alu 1 298 -13 286 258 13 58 chr5 178776800 178776955 -20853195 + HAL1 LINE L1 1350 1497 -1010 23 0 0 0 chr5 178777475 178777498 -20852652 + AT_rich Low_complexity Low_complexity 1 23 0 2620 42 0 3 chr5 178778068 178778380 -20851770 - AluY SINE Alu 0 311 1 411 297 119 5 chr5 178778699 178778884 -20851266 + MIR SINE MIR 1 206 -56 2086 149 0 3 chr5 178779084 178779393 -20850757 - AluSx SINE Alu -4 308 1 472 250 174 5 chr5 178779616 178779800 -20850350 - MIR SINE MIR -12 250 36 1951 81 89 19 chr5 178780940 178781253 -20848897 - AluSx SINE Alu 0 312 1 25 0 0 0 chr5 178781257 178781282 -20848868 + AT_rich Low_complexity Low_complexity 1 25 0 618 225 267 5 chr5 178781706 178781897 -20848253 - MIR SINE MIR -13 249 9 2485 161 47 64 chr5 178781901 178782429 -20847721 - MLT2B1 LTR ERVL 0 520 2 441 284 0 9 chr5 178782455 178782564 -20847586 + L2 LINE L2 3191 3298 -15 475 298 5 61 chr5 178782925 178783072 -20847078 + MER5A DNA MER1_type 1 136 -53 1753 189 0 22 chr5 178783072 178783385 -20846765 - AluJb SINE Alu -6 306 1 475 298 5 61 chr5 178783385 178783435 -20846715 + MER5A DNA MER1_type 136 187 -2 805 244 145 9 chr5 178783886 178784107 -20846043 + MIR SINE MIR 6 256 -6 510 46 0 0 chr5 178784638 178784703 -20845447 + (CA)n Simple_repeat Simple_repeat 2 66 0 1005 113 0 0 chr5 178784741 178784874 -20845276 + AluSq/x SINE Alu 1 133 -179 22 0 0 0 chr5 178785064 178785086 -20845064 + AT_rich Low_complexity Low_complexity 1 22 0 254 198 180 0 chr5 178785178 178785289 -20844861 + L1MC5 LINE L1 7750 7880 -81 3878 136 55 31 chr5 178785810 178786170 -20843980 - LTR8A LTR ERV1 0 727 377 2193 87 7 11 chr5 178786170 178786457 -20843693 + AluSq SINE Alu 15 300 -13 3878 136 55 31 chr5 178786457 178786802 -20843348 - LTR8A LTR ERV1 -350 377 5 3719 69 39 0 chr5 178786802 178787295 -20842855 - LTR10D LTR ERV1 0 513 1 241 321 71 21 chr5 178787785 178787925 -20842225 + MIR SINE MIR 20 166 -96 391 275 96 57 chr5 178788085 178788365 -20841785 + L2 LINE L2 1805 2095 -1219 2491 62 0 7 chr5 178788905 178789209 -20840941 - AluY SINE Alu -9 302 1 1050 329 37 42 chr5 178789252 178789848 -20840302 + L2 LINE L2 2104 2696 -618 1482 35 0 0 chr5 178789850 178790021 -20840129 - AluYb8 SINE Alu -2 316 146 2086 113 59 5 chr5 178790026 178790400 -20839750 + LTR7 LTR ERV1 1 450 0 15879 132 15 16 chr5 178790400 178793429 -20836721 + HERVH LTR ERV1 1 3338 -4375 5228 166 10 12 chr5 178793429 178794434 -20835716 + HERVH LTR ERV1 3825 4812 -2287 * 5810 126 22 1 chr5 178794433 178795323 -20834827 + HERVH LTR ERV1 5108 6016 -1697 3851 90 9 30 chr5 178795316 178795885 -20834265 + HERVH LTR ERV1 7157 7713 0 * 1820 109 67 6 chr5 178795885 178796227 -20833923 + LTR7 LTR ERV1 1 419 -31 868 158 89 7 chr5 178796235 178796381 -20833769 - AluSx SINE Alu -154 158 1 23 0 0 0 chr5 178796744 178796767 -20833383 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr5 178796886 178796922 -20833228 + AT_rich Low_complexity Low_complexity 1 36 0 390 272 99 86 chr5 178797217 178797460 -20832690 - MIR SINE MIR -5 257 12 306 279 13 0 chr5 178797747 178797826 -20832324 - MER81 DNA DNA 0 114 35 1888 162 0 16 chr5 178798665 178798968 -20831182 + AluJb SINE Alu 1 298 -14 1952 116 14 38 chr5 178799099 178799392 -20830758 + AluSx SINE Alu 1 286 -26 261 289 89 0 chr5 178799421 178799511 -20830639 + MIR3 SINE MIR 57 154 -54 243 230 0 54 chr5 178799808 178799882 -20830268 + MLT1K LTR MaLR 178 247 -341 2237 34 4 15 chr5 178800073 178800340 -20829810 - AluY SINE Alu -47 264 1 943 140 91 16 chr5 178800340 178800526 -20829624 - MSTA LTR MaLR -228 200 1 1599 225 113 39 chr5 178800900 178801367 -20828783 - MLT1D LTR MaLR -1 504 3 361 330 75 20 chr5 178801590 178801790 -20828360 + MIR SINE MIR 49 259 -3 198 103 0 0 chr5 178801793 178801822 -20828328 + (TAA)n Simple_repeat Simple_repeat 3 31 0 586 304 19 39 chr5 178802462 178802719 -20827431 + MIR SINE MIR 6 257 -5 192 125 0 0 chr5 178802720 178802752 -20827398 + (TAG)n Simple_repeat Simple_repeat 2 33 0 195 305 85 12 chr5 178802770 178802852 -20827298 - MIR3 SINE MIR -6 202 115 213 39 0 0 chr5 178803177 178803203 -20826947 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 389 212 40 71 chr5 178804011 178804110 -20826040 - MLT1I LTR MaLR -2 407 324 2448 70 3 3 chr5 178804118 178804419 -20825731 + AluY SINE Alu 1 301 -10 427 273 30 0 chr5 178804504 178804603 -20825547 + L2 LINE L2 3211 3312 -1 355 331 8 8 chr5 178806303 178806433 -20823717 + L2 LINE L2 2725 2854 -460 328 291 61 31 chr5 178806423 178806619 -20823531 + L2 LINE L2 3075 3276 -37 * 246 164 0 0 chr5 178807431 178807486 -20822664 + CT-rich Low_complexity Low_complexity 1 55 0 1097 176 0 90 chr5 178807818 178808074 -20822076 + L1MB8 LINE L1 5946 6178 0 1412 224 42 12 chr5 178808583 178808913 -20821237 + MER58B DNA MER1_type 1 340 -1 2078 111 4 0 chr5 178809103 178809425 -20820725 - AluSx SINE Alu 0 323 1 2717 187 78 78 chr5 178809553 178809718 -20820432 - LTR8A LTR ERV1 0 727 563 2320 91 0 7 chr5 178809718 178810016 -20820134 - AluSg1 SINE Alu -13 296 1 2717 187 78 78 chr5 178810016 178810577 -20819573 - LTR8A LTR ERV1 -163 564 1 1165 187 72 0 chr5 178810661 178810870 -20819280 - MER58A DNA MER1_type 0 224 1 1910 187 22 14 chr5 178810925 178811283 -20818867 + MLT1A1 LTR MaLR 5 365 0 4243 120 335 35 chr5 178811346 178812337 -20817813 + pTR5 LTR ERV1 741 2028 -410 366 168 14 46 chr5 178812340 178812440 -20817710 + LTR30 LTR ERV1 377 624 -94 1713 67 13 0 chr5 178812440 178812664 -20817486 + pTR5 LTR ERV1 177 403 -2035 2399 207 29 0 chr5 178813158 178813612 -20816538 + MLT1C LTR MaLR 1 467 0 3353 157 41 8 chr5 178813647 178814156 -20815994 + MER1A DNA MER1_type 2 527 0 225 354 0 0 chr5 178814245 178814310 -20815840 + L2 LINE L2 3207 3271 -1 2619 122 16 21 chr5 178814320 178814697 -20815453 + THE1C LTR MaLR 1 375 0 9854 111 37 51 chr5 178814697 178816295 -20813855 + THE1C-int LTR MaLR 1 1575 -5 2704 111 16 21 chr5 178816301 178816678 -20813472 + THE1C LTR MaLR 1 375 0 272 299 52 78 chr5 178817168 178817322 -20812828 + MER5B DNA MER1_type 1 150 -28 22 0 0 0 chr5 178817400 178817422 -20812728 + AT_rich Low_complexity Low_complexity 1 22 0 1694 181 0 0 chr5 178817426 178817707 -20812443 + AluJb SINE Alu 2 282 -30 216 0 0 0 chr5 178817711 178817735 -20812415 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 532 306 65 22 chr5 178818513 178818742 -20811408 - MIR SINE MIR -1 261 23 478 342 0 31 chr5 178818770 178818966 -20811184 + MIR3 SINE MIR 10 199 -9 2262 178 111 49 chr5 178820214 178820957 -20809193 + LTR27 LTR ERV1 3 827 -141 370 213 27 86 chr5 178821033 178821195 -20808955 + MER52A LTR ERV1 527 634 -2 2335 78 7 0 chr5 178821975 178822268 -20807882 + AluY SINE Alu 1 295 -16 305 335 84 34 chr5 178822397 178822660 -20807490 + L2 LINE L2 2702 2977 -337 505 197 94 44 chr5 178822727 178822930 -20807220 + HAL1 LINE L1 1981 2193 -314 1916 167 3 0 chr5 178823456 178823767 -20806383 + AluSx SINE Alu 1 312 0 2436 118 62 24 chr5 178824080 178824488 -20805662 + MSTB1 LTR MaLR 3 367 -8 560 242 0 17 chr5 178824506 178824626 -20805524 + MER33 DNA MER1_type 1 118 -206 386 177 0 0 chr5 178824609 178824671 -20805479 + MER33 DNA MER1_type 263 324 0 * 243 322 13 105 chr5 178824673 178824825 -20805325 + MIR3 SINE MIR 57 194 -14 428 330 88 5 chr5 178824976 178825191 -20804959 - MIR SINE MIR -27 235 3 769 249 34 43 chr5 178825680 178826099 -20804051 + L1MC5 LINE L1 6850 7176 -632 462 242 32 59 chr5 178826195 178826381 -20803769 + L1MC5 LINE L1 7293 7473 -488 550 270 23 11 chr5 178826409 178826583 -20803567 + L1M3b LINE L1 33 208 -6105 2555 283 50 38 chr5 178826867 178828647 -20801503 + L1M3b LINE L1 778 2536 -3848 4450 85 75 39 chr5 178828647 178829284 -20800866 - PABL_A LTR ERV1 0 660 1 2555 283 50 38 chr5 178829284 178829348 -20800802 + L1M3b LINE L1 2536 2326 -4058 3195 137 16 68 chr5 178829348 178829961 -20800189 + L1MA7 LINE L1 5708 6288 -3 2555 283 50 38 chr5 178829961 178829996 -20800154 + L1M3b LINE L1 2325 2358 -4026 383 224 60 68 chr5 178829967 178830217 -20799933 + L1MC5 LINE L1 7698 7945 -252 * 255 252 30 30 chr5 178830413 178830548 -20799602 + L1MC5 LINE L1 7794 7928 -33 335 282 113 0 chr5 178830552 178830694 -20799456 - MARNA DNA Mariner -266 320 163 2272 106 52 70 chr5 178831422 178831791 -20798359 + THE1B LTR MaLR 3 364 0 22 70 0 0 chr5 178834309 178834352 -20795798 + AT_rich Low_complexity Low_complexity 1 43 0 267 130 39 0 chr5 178834355 178834432 -20795718 + (TA)n Simple_repeat Simple_repeat 1 80 0 21 71 0 0 chr5 178834432 178834474 -20795676 + AT_rich Low_complexity Low_complexity 1 42 0 216 326 21 42 chr5 178834547 178834642 -20795508 - MIR SINE MIR -55 153 61 1483 126 28 0 chr5 178834872 178835087 -20795063 + L1PA10 LINE L1 5944 6164 -4 245 39 58 19 chr5 178835182 178835234 -20794916 + (CA)n Simple_repeat Simple_repeat 2 55 0 2082 118 0 0 chr5 178835876 178836156 -20793994 + AluSx SINE Alu 1 280 -32 7969 30 2 10 chr5 178836158 178837254 -20792896 + L1PA4 LINE L1 5064 6152 -3 468 271 91 50 chr5 178837313 178837534 -20792616 + MIR SINE MIR 33 262 0 756 175 60 33 chr5 178837815 178837998 -20792152 + MER53 DNA DNA 2 189 0 482 143 129 100 chr5 178838296 178838436 -20791714 + HAL1 LINE L1 1 144 -2363 748 269 68 5 chr5 178838436 178838655 -20791495 + MLT1H1 LTR MaLR 312 544 -11 2412 102 0 3 chr5 178838799 178839112 -20791038 + AluSq SINE Alu 1 312 -1 2113 141 0 3 chr5 178839128 178839432 -20790718 + AluSx SINE Alu 2 304 -8 931 119 6 6 chr5 178839432 178839591 -20790559 + (GGAA)n Simple_repeat Simple_repeat 3 161 0 1952 158 7 3 chr5 178839872 178840175 -20789975 + AluJo SINE Alu 1 304 -8 1967 206 59 2 chr5 178840895 178841337 -20788813 + MLT1C LTR MaLR 1 467 0 217 297 27 40 chr5 178842727 178842801 -20787349 - MIR3 SINE MIR -53 155 83 619 189 16 0 chr5 178842981 178843103 -20787047 + FLAM_A SINE Alu 1 124 -9 394 116 3 19 chr5 178843403 178843475 -20786675 - MLT1C LTR MaLR -43 424 313 2682 93 0 34 chr5 178843578 178843965 -20786185 - THE1C LTR MaLR 0 375 2 2647 117 20 23 chr5 178843966 178844431 -20785719 - THE1C-int LTR MaLR 0 1580 864 * 5556 164 19 3 chr5 178844420 178845749 -20784401 - L1MA4 LINE L1 -2 6298 4944 1188 194 4 4 chr5 178845819 178845838 -20784312 - L1MA4 LINE L1 -1166 4980 4962 1106 115 0 11 chr5 178845838 178846012 -20784138 - L1PA13 LINE L1 -7 6156 5985 1188 194 4 4 chr5 178846012 178846234 -20783916 - L1MA4 LINE L1 -1183 4963 4739 5558 70 4 0 chr5 178846451 178847165 -20782985 - L1PA7 LINE L1 -2 6152 5436 3480 82 24 2 chr5 178847166 178847727 -20782423 + L1P LINE L1 4857 5428 -726 1256 160 38 76 chr5 178847724 178848117 -20782033 - L1MA4 LINE L1 -1449 4697 4320 * 997 218 3 27 chr5 178848118 178848459 -20781691 + L1 LINE L1 4329 4647 -1499 2038 219 22 11 chr5 178848765 178848834 -20781316 + L1PA16 LINE L1 4630 4697 -1449 348 64 0 0 chr5 178848834 178848881 -20781269 + (CA)n Simple_repeat Simple_repeat 2 48 0 2038 219 22 11 chr5 178848881 178849344 -20780806 + L1PA16 LINE L1 4697 5168 -978 * 4367 158 14 1 chr5 178849343 178850718 -20779432 + L1PB1 LINE L1 4401 5793 -358 324 0 0 0 chr5 178850718 178850754 -20779396 + (CA)n Simple_repeat Simple_repeat 2 37 0 4367 158 14 1 chr5 178850754 178850829 -20779321 + L1PB1 LINE L1 5793 5866 -285 335 37 37 0 chr5 178850929 178850983 -20779167 + L1PB1 LINE L1 6096 6151 0 4930 152 16 3 chr5 178850983 178851972 -20778178 + L1PA16 LINE L1 5159 6157 -9 1171 123 3 130 chr5 178852040 178852148 -20778002 - L1 LINE L1 -1818 4328 4208 2119 139 0 0 chr5 178852148 178852458 -20777692 - AluSg SINE Alu 0 310 1 1171 123 3 130 chr5 178852458 178852642 -20777508 - L1 LINE L1 -1938 4208 4073 1583 167 104 31 chr5 178854076 178854459 -20775691 + L1MA7 LINE L1 5881 6291 0 2102 131 0 28 chr5 178854461 178854803 -20775347 + AluSx SINE Alu 1 312 0 415 285 27 113 chr5 178854984 178855199 -20774951 + MIR SINE MIR 20 208 -54 1906 166 0 3 chr5 178855199 178855500 -20774650 + AluJb SINE Alu 1 300 -12 415 285 27 113 chr5 178855500 178855545 -20774605 + MIR SINE MIR 208 255 -7 261 289 67 11 chr5 178855940 178856030 -20774120 - MIR SINE MIR -56 152 58 2090 134 3 7 chr5 178856197 178856496 -20773654 + AluSx SINE Alu 1 298 -14 517 367 68 25 chr5 178856698 178857093 -20773057 + L2 LINE L2 2859 3270 -2 188 67 33 0 chr5 178858334 178858364 -20771786 + (TAAAG)n Simple_repeat Simple_repeat 2 32 0 862 281 46 13 chr5 178859054 178859292 -20770858 - MIR SINE MIR -2 260 15 185 91 0 30 chr5 178859983 178860016 -20770134 + (TCCC)n Simple_repeat Simple_repeat 2 33 0 225 154 0 0 chr5 178860018 178860057 -20770093 + (CA)n Simple_repeat Simple_repeat 2 40 0 251 159 23 0 chr5 178860150 178860194 -20769956 - L2 LINE L2 -9 3263 3219 442 316 75 11 chr5 178860280 178860467 -20769683 - MIR SINE MIR 0 262 64 344 220 262 7 chr5 178860504 178860645 -20769505 - MIR SINE MIR -16 246 70 2169 93 13 26 chr5 178860676 178860988 -20769162 - AluSg SINE Alu -2 308 1 201 420 0 9 chr5 178861398 178861510 -20768640 + L2 LINE L2 3200 3310 -3 339 208 28 0 chr5 178861550 178861622 -20768528 + MER96B DNA MER1_type? 1 74 -343 * 394 246 0 36 chr5 178861619 178861729 -20768421 + MER96B DNA MER1_type? 194 299 -118 479 319 27 16 chr5 178861767 178861955 -20768195 + MIR SINE MIR 67 256 -6 1642 128 0 8 chr5 178862099 178862333 -20767817 + AluSx SINE Alu 53 284 -28 297 0 0 0 chr5 178862333 178862366 -20767784 + (CA)n Simple_repeat Simple_repeat 2 34 0 180 204 0 61 chr5 178862545 178862594 -20767556 + MER5A DNA MER1_type 54 99 -90 2134 105 3 16 chr5 178863070 178863374 -20766776 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr5 178863463 178863485 -20766665 + AT_rich Low_complexity Low_complexity 1 22 0 500 254 36 7 chr5 178863620 178863758 -20766392 + MIR SINE MIR 70 211 -51 446 234 162 66 chr5 178864451 178864578 -20765572 - MER5A DNA MER1_type 0 189 41 3004 126 86 20 chr5 178864578 178865134 -20765016 + LTR49 LTR ERV1 1 593 -2 446 234 162 66 chr5 178865134 178865173 -20764977 - MER5A DNA MER1_type -148 41 7 1481 121 94 7 chr5 178865257 178865555 -20764595 + LTR56 LTR ERV1 1 324 -121 2219 114 3 0 chr5 178865565 178865873 -20764277 + AluSx SINE Alu 1 309 -3 338 348 63 56 chr5 178865952 178866222 -20763928 + L2 LINE L2 3000 3271 -1 557 252 65 61 chr5 178866636 178866914 -20763236 + MLT1C LTR MaLR 1 279 -188 2143 112 10 0 chr5 178867129 178867423 -20762727 - AluSq SINE Alu -16 297 1 21 36 0 0 chr5 178868884 178868912 -20761238 + AT_rich Low_complexity Low_complexity 1 28 0 245 250 38 62 chr5 178869010 178869170 -20760980 + HAL1 LINE L1 57 212 -2295 182 88 0 29 chr5 178869550 178869584 -20760566 + (GGAA)n Simple_repeat Simple_repeat 2 34 0 450 294 30 25 chr5 178869666 178869863 -20760287 + HAL1 LINE L1 342 539 -1968 642 208 116 12 chr5 178870082 178870255 -20759895 - MER20 DNA MER1_type -12 207 17 246 238 125 56 chr5 178870268 178870428 -20759722 + HAL1 LINE L1 745 915 -1592 2111 127 0 3 chr5 178870577 178870869 -20759281 + AluSx SINE Alu 11 301 -11 1251 186 47 66 chr5 178872361 178872619 -20757531 - AluJo SINE Alu -29 283 31 218 356 0 0 chr5 178872939 178873012 -20757138 + MIR3 SINE MIR 116 188 -20 2080 103 0 68 chr5 178873634 178873955 -20756195 - AluSc SINE Alu -10 299 1 7864 81 5 15 chr5 178874040 178875122 -20755028 + MER11C LTR ERVK 1 1071 0 1367 106 0 5 chr5 178875463 178875651 -20754499 + AluSc SINE Alu 103 289 -20 2319 113 0 0 chr5 178876346 178876655 -20753495 + AluY SINE Alu 3 311 0 895 264 87 92 chr5 178876852 178877417 -20752733 + MLT1G1 LTR MaLR 1 562 -33 216 0 0 0 chr5 178878043 178878067 -20752083 + (CA)n Simple_repeat Simple_repeat 2 25 0 7211 195 23 65 chr5 178878350 178878556 -20751594 + L1PB1 LINE L1 2476 2689 -3462 625 207 17 0 chr5 178878556 178878719 -20751431 - FLAM_C SINE Alu 0 165 1 7211 195 23 65 chr5 178878719 178879232 -20750918 + L1PB1 LINE L1 2689 3222 -2929 2112 124 7 3 chr5 178879232 178879530 -20750620 + AluSx SINE Alu 1 299 -13 7211 195 23 65 chr5 178879530 178880197 -20749953 + L1PB1 LINE L1 3222 3916 -2235 2516 188 8 88 chr5 178880197 178880797 -20749353 + MLT2B3 LTR ERVL 3 554 0 7211 195 23 65 chr5 178880797 178880817 -20749333 + L1PB1 LINE L1 3916 3935 -2216 1717 120 136 0 chr5 178880817 178881091 -20749059 + AluSx SINE Alu 1 308 0 7211 195 23 65 chr5 178881091 178881177 -20748973 + L1PB1 LINE L1 3935 4023 -2128 2038 147 0 3 chr5 178881177 178881506 -20748644 + AluSx SINE Alu 1 312 0 7211 195 23 65 chr5 178881506 178883849 -20746301 + L1PB1 LINE L1 4023 6150 -1 305 143 95 0 chr5 178883976 178884060 -20746090 + L1MA9 LINE L1 5963 6054 -258 24 0 0 0 chr5 178884209 178884233 -20745917 + AT_rich Low_complexity Low_complexity 1 24 0 1839 145 24 24 chr5 178884452 178884741 -20745409 + AluJo SINE Alu 2 290 -22 590 62 97 0 chr5 178884741 178885000 -20745150 + (TA)n Simple_repeat Simple_repeat 1 284 0 235 274 63 42 chr5 178885209 178885304 -20744846 + MIR SINE MIR 35 131 -77 1093 180 81 7 chr5 178885329 178885659 -20744491 + MLT1B LTR MaLR 1 390 0 318 167 198 0 chr5 178886068 178886164 -20743986 - MIR SINE MIR 0 262 148 285 360 58 17 chr5 178886948 178887120 -20743030 + L2 LINE L2 1645 1823 -1491 272 289 252 9 chr5 178887124 178887446 -20742704 + L2 LINE L2 1942 2341 -973 303 350 54 44 chr5 178887529 178887990 -20742160 + L2 LINE L2 2583 3048 -224 492 32 0 0 chr5 178888520 178888582 -20741568 + (TG)n Simple_repeat Simple_repeat 2 63 0 262 346 80 12 chr5 178890723 178890885 -20739265 - MIR SINE MIR -71 191 19 2363 85 0 0 chr5 178891008 178891302 -20738848 - AluSx SINE Alu -18 294 1 189 306 45 72 chr5 178892146 178892257 -20737893 - MIR3 SINE MIR -23 185 78 281 268 102 55 chr5 178893482 178893609 -20736541 - MIR SINE MIR -16 246 114 382 233 166 12 chr5 178893620 178893783 -20736367 - MIR SINE MIR -9 253 66 2416 71 0 0 chr5 178893922 178894217 -20735933 + AluSc SINE Alu 3 297 -12 21 0 0 0 chr5 178897519 178897540 -20732610 + AT_rich Low_complexity Low_complexity 1 21 0 2447 58 0 10 chr5 178898204 178898512 -20731638 + AluY SINE Alu 1 305 -6 1687 171 3 33 chr5 178900503 178900808 -20729342 - AluJb SINE Alu -16 296 1 503 209 104 8 chr5 178901401 178901535 -20728615 - MIR SINE MIR -112 150 4 1972 123 32 3 chr5 178901783 178902067 -20728083 + AluSx SINE Alu 1 292 -20 605 261 37 57 chr5 178902074 178902236 -20727914 + L1M4 LINE L1 2332 2496 -3650 1451 217 25 0 chr5 178902236 178902512 -20727638 + AluJo SINE Alu 17 299 -13 605 261 37 57 chr5 178902512 178902698 -20727452 + L1M4 LINE L1 2496 2673 -3473 4559 211 154 87 chr5 178902801 178903312 -20726838 + L1MB7 LINE L1 2506 2981 -3203 858 178 30 12 chr5 178903312 178903481 -20726669 + AluJo SINE Alu 122 293 -19 4559 211 154 87 chr5 178903481 178905285 -20724865 + L1MB7 LINE L1 2981 4663 -1521 1729 156 13 32 chr5 178905285 178905593 -20724557 + AluSx SINE Alu 1 302 -10 4559 211 154 87 chr5 178905593 178907084 -20723066 + L1MB7 LINE L1 4663 5137 -1047 2286 88 3 0 chr5 178907084 178907378 -20722772 + AluSp SINE Alu 1 295 -18 4559 211 154 87 chr5 178907378 178908459 -20721691 + L1MB7 LINE L1 5137 6144 -40 318 328 57 28 chr5 178909422 178909599 -20720551 + L1MC4a LINE L1 5338 5519 -643 2307 100 3 0 chr5 178909642 178909953 -20720197 - AluSp SINE Alu -1 312 1 424 235 10 0 chr5 178909954 178910052 -20720098 - MIR SINE MIR -4 258 160 1826 281 125 29 chr5 178910085 178910235 -20719915 - L2 LINE L2 -1 3312 3178 733 229 167 0 chr5 178910235 178910427 -20719723 - MER58A DNA MER1_type 0 224 1 1826 281 125 29 chr5 178910427 178910794 -20719356 - L2 LINE L2 -135 3178 2848 1850 90 0 8 chr5 178910794 178911049 -20719101 + AluY SINE Alu 1 253 -58 1826 281 125 29 chr5 178911049 178911529 -20718621 - L2 LINE L2 -465 2848 2214 387 329 47 12 chr5 178911548 178911867 -20718283 + L1MC4a LINE L1 5618 5947 -1861 24 67 0 0 chr5 178912168 178912213 -20717937 + AT_rich Low_complexity Low_complexity 1 45 0 1543 102 19 0 chr5 178912453 178912668 -20717482 - AluSg/x SINE Alu -15 295 77 2364 74 20 0 chr5 178913294 178913593 -20716557 - AluSg SINE Alu -4 306 2 28 29 0 0 chr5 178913720 178913755 -20716395 + AT_rich Low_complexity Low_complexity 1 35 0 560 225 63 0 chr5 178913764 178913906 -20716244 + FRAM SINE Alu 2 152 -24 436 319 38 27 chr5 178914272 178914457 -20715693 - MIR SINE MIR -2 260 74 376 300 92 0 chr5 178916185 178916305 -20713845 - L2 LINE L2 -14 3299 3169 449 251 174 24 chr5 178916552 178916759 -20713391 - MIR SINE MIR -16 246 9 2133 56 49 11 chr5 178916825 178917111 -20713039 + AluY SINE Alu 1 297 -14 399 257 166 10 chr5 178917140 178917282 -20712868 - MIR SINE MIR -62 146 34 382 123 0 0 chr5 178917638 178917695 -20712455 + Alu SINE Alu 246 302 0 308 232 152 18 chr5 178917740 178917852 -20712298 + MER112 DNA MER1_type 74 200 -60 2266 102 0 3 chr5 178917857 178918162 -20711988 + AluSx SINE Alu 1 304 -8 483 271 159 0 chr5 178918494 178918645 -20711505 + MIR SINE MIR 82 256 -6 1758 164 20 0 chr5 178919643 178919947 -20710203 + AluSx SINE Alu 1 310 -2 1862 143 0 30 chr5 178920651 178920952 -20709198 - AluSx SINE Alu -20 292 1 2029 107 3 27 chr5 178920983 178921283 -20708867 + AluSx SINE Alu 5 297 -15 2168 107 3 16 chr5 178921286 178921595 -20708555 + AluSx SINE Alu 1 305 -7 566 185 42 0 chr5 178921706 178921825 -20708325 + Charlie5 DNA MER1_type 1 124 -2488 1352 171 111 3 chr5 178921825 178922175 -20707975 + Charlie5 DNA MER1_type 2236 2623 0 782 200 189 0 chr5 178923525 178923700 -20706450 - MER3 DNA MER1_type 0 209 2 302 290 21 0 chr5 178924078 178924171 -20705979 - HAL1 LINE L1 -910 1597 1503 2357 79 0 23 chr5 178924387 178924692 -20705458 + AluY SINE Alu 1 298 -13 2141 102 3 0 chr5 178925189 178925495 -20704655 + AluSp SINE Alu 1 307 0 1678 137 27 101 chr5 178925643 178925971 -20704179 + AluSx SINE Alu 1 304 -8 1745 171 0 23 chr5 178926015 178926319 -20703831 + AluJo SINE Alu 6 302 -10 2282 210 69 74 chr5 178927104 178927354 -20702796 - L1ME2 LINE L1 -10 6154 5904 649 219 31 0 chr5 178927354 178927482 -20702668 - FLAM_C SINE Alu -1 132 1 2282 210 69 74 chr5 178927482 178928087 -20702063 - L1ME2 LINE L1 -260 5904 5303 220 244 0 0 chr5 178928350 178928395 -20701755 + MIR SINE MIR 6 50 -212 299 265 8 68 chr5 178929576 178929708 -20700442 + L1ME LINE L1 5597 5720 -401 270 310 150 15 chr5 178929853 178930109 -20700041 + L1MC/D LINE L1 5259 5544 -624 26 0 0 0 chr5 178930493 178930519 -20699631 + AT_rich Low_complexity Low_complexity 1 26 0 25 51 0 0 chr5 178931080 178931119 -20699031 + AT_rich Low_complexity Low_complexity 1 39 0 1726 193 0 13 chr5 178931334 178931634 -20698516 + AluJo SINE Alu 1 296 -16 834 206 0 13 chr5 178931796 178931951 -20698199 + FAM SINE Alu 5 157 -18 2149 107 0 10 chr5 178932051 178932350 -20697800 + AluSg SINE Alu 1 296 -14 382 331 54 20 chr5 178932956 178933104 -20697046 + MIR3 SINE MIR 39 191 -17 276 347 20 10 chr5 178934188 178934286 -20695864 + L2 LINE L2 1189 1287 -2027 328 229 0 0 chr5 178934346 178934407 -20695743 + FRAM/FAM SINE Alu 1 61 -114 1635 158 50 17 chr5 178934692 178934989 -20695161 + AluJo SINE Alu 1 307 -5 748 272 154 21 chr5 178935583 178936058 -20694092 - L1ME3A LINE L1 -220 5950 5413 565 289 129 11 chr5 178936065 178936446 -20693704 - L1ME3A LINE L1 -798 5348 4923 209 231 46 9 chr5 178936522 178936630 -20693520 + (TA)n Simple_repeat Simple_repeat 2 113 0 829 356 56 22 chr5 178936691 178937188 -20692962 + L2 LINE L2 2181 2694 -620 2277 103 0 3 chr5 178937210 178937521 -20692629 - AluSq SINE Alu -3 310 1 2582 173 21 50 chr5 178939886 178940506 -20689644 - L1MB8 LINE L1 0 6178 5577 7061 203 53 51 chr5 178940073 178940510 -20689640 - L1MC4 LINE L1 -743 6214 5779 321 73 0 0 chr5 178940510 178940551 -20689599 - 5S rRNA rRNA -79 42 2 7061 203 53 51 chr5 178940551 178942101 -20688049 - L1MC4 LINE L1 -1178 5779 4795 1809 126 61 0 chr5 178942101 178942378 -20687772 + AluSq SINE Alu 1 294 -19 7061 203 53 51 chr5 178942378 178943105 -20687045 - L1MC4 LINE L1 -2162 4795 4071 2004 137 10 13 chr5 178943145 178943458 -20686692 - AluJb SINE Alu 0 312 1 837 148 7 26 chr5 178943466 178943621 -20686529 - L1PA16 LINE L1 0 6166 6015 3615 263 77 45 chr5 178943634 178944267 -20685883 - L1MC4 LINE L1 -5380 1479 867 2025 127 0 74 chr5 178944267 178944630 -20685520 - MER1B DNA MER1_type -1 336 1 3615 263 77 45 chr5 178944630 178945420 -20684730 - L1MC4 LINE L1 -5992 867 11 291 328 41 33 chr5 178947006 178947128 -20683022 + MER5A DNA MER1_type 66 188 -1 659 158 126 0 chr5 178947609 178947736 -20682414 + FLAM_C SINE Alu 1 143 0 18046 172 71 12 chr5 178947771 178950178 -20679972 - ERVL-B1 LTR ERVL -1924 3840 1576 2354 12 0 0 chr5 178950178 178950436 -20679714 - AluYb8 SINE Alu -8 310 53 18046 172 71 12 chr5 178950436 178951383 -20678767 - ERVL-B1 LTR ERVL -4188 1576 255 3922 113 12 12 chr5 178951383 178951985 -20678165 + LTR43 LTR ERV1 1 602 0 18046 172 71 12 chr5 178951985 178952255 -20677895 - ERVL-B1 LTR ERVL -5509 255 2 1025 224 114 29 chr5 178952256 178952684 -20677466 - MLT2B1 LTR ERVL 0 520 1 218 307 23 45 chr5 178953449 178953537 -20676613 - L2 LINE L2 0 3272 3187 312 299 34 26 chr5 178953749 178953866 -20676284 - L2 LINE L2 -554 2760 2643 * 358 291 74 59 chr5 178953855 178953946 -20676204 + L2 LINE L2 2766 2854 -460 213 39 0 0 chr5 178953946 178953972 -20676178 + (TTCTCC)n Simple_repeat Simple_repeat 5 30 0 1747 161 0 31 chr5 178953971 178954285 -20675865 - AluJb SINE Alu 0 305 1 358 291 74 59 chr5 178954285 178954395 -20675755 + L2 LINE L2 3167 2971 -343 25 0 0 0 chr5 178954609 178954634 -20675516 + AT_rich Low_complexity Low_complexity 1 25 0 1345 193 79 31 chr5 178955274 178955599 -20674551 - L1ME2 LINE L1 -202 5962 5616 2121 92 3 11 chr5 178955599 178955923 -20674227 - AluSg SINE Alu 0 322 1 1345 193 79 31 chr5 178955923 178955949 -20674201 - L1ME2 LINE L1 -548 5616 5593 406 200 70 0 chr5 178956002 178956102 -20674048 - L1ME2 LINE L1 -555 5609 5503 1270 182 72 1 chr5 178956106 178956576 -20673574 + MER34 LTR ERV1 1 542 0 587 176 99 0 chr5 178956580 178956722 -20673428 - L1ME2 LINE L1 -664 5498 5343 2252 106 0 0 chr5 178956730 178957022 -20673128 + AluSx SINE Alu 3 294 -18 2722 13 0 0 chr5 178957026 178957354 -20672796 + AluYb8 SINE Alu 1 328 0 667 114 99 8 chr5 178957365 178957496 -20672654 + LTR32 LTR ERVL 15 157 -314 747 168 0 7 chr5 178957497 178957634 -20672516 + FRAM SINE Alu 32 167 -9 527 59 0 0 chr5 178957634 178957702 -20672448 - MER101 LTR ERV1 -406 68 1 186 232 74 74 chr5 178957906 178958001 -20672149 - MER5A DNA MER1_type -16 173 79 189 0 0 0 chr5 178958371 178958392 -20671758 + (TTTTTG)n Simple_repeat Simple_repeat 5 25 0 200 346 51 0 chr5 178960225 178960303 -20669847 - MER5A DNA MER1_type -62 127 46 410 272 160 14 chr5 178961476 178961689 -20668461 - MIR SINE MIR -9 253 10 333 246 127 32 chr5 178963220 178963346 -20666804 - MIR3 SINE MIR -6 202 65 1915 138 30 0 chr5 178963544 178963840 -20666310 - AluSx SINE Alu -7 305 1 1021 96 0 19 chr5 178963905 178964061 -20666089 - AluSg/x SINE Alu 0 312 160 597 182 240 13 chr5 178964718 178964872 -20665278 + MER5A DNA MER1_type 1 189 0 2246 96 3 10 chr5 178965697 178966000 -20664150 - AluSq SINE Alu -12 301 1 21 36 0 0 chr5 178966550 178966578 -20663572 + AT_rich Low_complexity Low_complexity 1 28 0 1687 137 13 65 chr5 178966578 178966885 -20663265 - AluJb SINE Alu -20 292 2 34 42 0 0 chr5 178966978 178967026 -20663124 + AT_rich Low_complexity Low_complexity 1 48 0 592 183 24 24 chr5 178967029 178967155 -20662995 - FLAM_C SINE Alu -7 126 1 235 250 186 32 chr5 178967726 178967850 -20662300 - MIR SINE MIR -14 248 106 1995 138 3 3 chr5 178967986 178968284 -20661866 - AluSx SINE Alu -14 298 1 1482 207 3 17 chr5 178968298 178968588 -20661562 - AluJo SINE Alu -21 291 6 246 151 70 12 chr5 178969610 178969696 -20660454 + (TATG)n Simple_repeat Simple_repeat 2 92 0 1225 172 100 54 chr5 178970160 178970509 -20659641 - MLT1A1 LTR MaLR 0 365 1 562 272 116 23 chr5 178970624 178970970 -20659180 - L1MC4 LINE L1 -35 8007 7630 1399 143 174 8 chr5 178971080 178971339 -20658811 - AluJb SINE Alu 0 302 1 1923 147 3 33 chr5 178971347 178971653 -20658497 - AluJo SINE Alu -15 297 1 272 95 0 24 chr5 178972312 178972354 -20657796 + Alu SINE Alu 1 41 -262 758 171 0 0 chr5 178973274 178973391 -20656759 + FLAM_C SINE Alu 1 117 -16 21 36 0 0 chr5 178973392 178973420 -20656730 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 178975490 178975514 -20654636 + AT_rich Low_complexity Low_complexity 1 24 0 1502 144 58 46 chr5 178975933 178976207 -20653943 - Tigger2 DNA MER2_type 0 2718 2438 2064 141 0 0 chr5 178976207 178976506 -20653644 - AluSx SINE Alu -13 299 1 1502 144 58 46 chr5 178976506 178976557 -20653593 - Tigger2 DNA MER2_type -280 2438 2389 344 259 95 18 chr5 178976557 178976704 -20653446 - MER5B DNA MER1_type -30 148 2 2300 103 3 0 chr5 178976995 178977297 -20652853 - AluSc SINE Alu -6 303 1 510 173 29 10 chr5 178977433 178977537 -20652613 - AluSq/x SINE Alu -207 106 1 3157 123 0 8 chr5 178977537 178978050 -20652100 - L1P LINE L1 -1141 5005 4497 317 308 17 8 chr5 178978247 178978367 -20651783 + MARNA DNA Mariner 449 569 -17 2919 140 16 0 chr5 178978561 178979060 -20651090 - L1MB1 LINE L1 -1 6167 5661 2287 31 34 0 chr5 178979160 178979451 -20650699 - LTR17 LTR ERV1 -479 301 1 1027 60 0 0 chr5 178979451 178979585 -20650565 - HERV17 LTR ERV1 0 8626 8493 482 305 81 31 chr5 178979837 178980060 -20650090 - MIR SINE MIR -27 235 2 305 298 0 92 chr5 178980075 178980216 -20649934 + MIR SINE MIR 21 148 -114 497 186 274 0 chr5 178980298 178980422 -20649728 + AluJo SINE Alu 1 158 -154 303 355 0 0 chr5 178981596 178981689 -20648461 - L1MC4a LINE L1 -1895 5913 5821 4156 82 10 15 chr5 178981689 178982277 -20647873 - L1PA10 LINE L1 -13 6155 5571 989 221 126 36 chr5 178982405 178982817 -20647333 - L1MC4 LINE L1 -36 8006 7558 334 252 75 82 chr5 178982827 178982942 -20647208 - L1MC4 LINE L1 -1426 6616 6502 1804 157 46 0 chr5 178982942 178983222 -20646928 - AluJb SINE Alu -19 293 1 2358 81 0 23 chr5 178983226 178983535 -20646615 - AluY SINE Alu -9 302 1 334 252 75 82 chr5 178983535 178983573 -20646577 - L1MC4 LINE L1 -1543 6499 6459 2186 130 34 3 chr5 178983863 178984217 -20645933 + MER47A DNA MER2_type 2 366 0 203 344 139 16 chr5 178984394 178984516 -20645634 + MIR SINE MIR 48 184 -78 2845 7 0 0 chr5 178985452 178985762 -20644388 - AluY SINE Alu -1 310 1 21 0 0 0 chr5 178985870 178985891 -20644259 + AT_rich Low_complexity Low_complexity 1 21 0 891 211 6 6 chr5 178986195 178986366 -20643784 - FAM SINE Alu -4 171 1 1128 185 52 45 chr5 178986370 178986570 -20643580 - MLT2D LTR ERVL -119 345 141 2601 91 39 0 chr5 178986570 178986931 -20643219 - THE1C LTR MaLR 0 375 1 1128 185 52 45 chr5 178986931 178987069 -20643081 - MLT2D LTR ERVL -323 141 5 3025 128 42 26 chr5 178987129 178987725 -20642425 - L1MB2 LINE L1 -7 6164 5445 2110 113 27 7 chr5 178987725 178988040 -20642110 - AluSx SINE Alu 0 312 1 1506 254 190 34 chr5 178988651 178989176 -20640974 - HAL1 LINE L1 -687 1820 1379 1676 176 181 25 chr5 178989176 178989613 -20640537 + MLT1D LTR MaLR 1 505 0 1506 254 190 34 chr5 178989613 178989690 -20640460 - HAL1 LINE L1 -1128 1379 1315 2281 96 0 0 chr5 178989690 178989983 -20640167 - AluSg SINE Alu -17 293 1 1506 254 190 34 chr5 178989983 178990452 -20639698 - HAL1 LINE L1 -1192 1315 580 2333 102 0 0 chr5 178990496 178990789 -20639361 - AluSx SINE Alu -16 296 4 1676 167 10 24 chr5 178991208 178991502 -20638648 + AluJb SINE Alu 3 292 -20 1078 247 203 13 chr5 178991534 178991923 -20638227 - HAL1 LINE L1 -2032 475 13 1329 248 99 105 chr5 178992696 178993322 -20636828 - MLT1E2 LTR MaLR 0 626 5 659 245 48 48 chr5 178993839 178993882 -20636268 + L1MC4a LINE L1 7558 7600 -208 2097 151 0 0 chr5 178993882 178994193 -20635957 + AluJb SINE Alu 1 311 -1 659 245 48 48 chr5 178994193 178994398 -20635752 + L1MC4a LINE L1 7599 7806 -2 247 313 62 31 chr5 178994527 178994623 -20635527 - MIR SINE MIR -135 127 29 250 291 47 47 chr5 178995670 178995797 -20634353 - MIR SINE MIR -61 147 21 367 228 278 0 chr5 178996186 178996320 -20633830 + MER5A DNA MER1_type 4 181 -8 412 187 195 41 chr5 178996336 178996459 -20633691 - MER5A DNA MER1_type 0 189 48 578 172 14 14 chr5 178996721 178996866 -20633284 + GA-rich Low_complexity Low_complexity 2 146 0 336 301 11 11 chr5 178996881 178996974 -20633176 - MER5A DNA MER1_type -90 99 7 1608 112 0 0 chr5 178997612 178997817 -20632333 + AluSx SINE Alu 1 205 -107 688 218 73 18 chr5 178997817 178997982 -20632168 - MER5A DNA MER1_type -15 174 1 311 361 72 12 chr5 178998556 178998722 -20631428 + MER5A DNA MER1_type 7 182 -7 2120 93 0 21 chr5 178999134 178999423 -20630727 - AluSx SINE Alu -29 283 1 2117 141 0 0 chr5 178999433 178999739 -20630411 - AluSx SINE Alu -4 308 3 2262 108 7 0 chr5 178999762 179000067 -20630083 - AluSc SINE Alu -2 307 1 217 212 50 81 chr5 179000792 179000891 -20629259 - L2 LINE L2 -86 3227 3132 203 271 0 0 chr5 179001231 179001290 -20628860 + T-rich Low_complexity Low_complexity 1 59 0 1332 152 152 33 chr5 179002812 179003082 -20627068 + AluJo SINE Alu 11 312 0 225 0 0 0 chr5 179003220 179003245 -20626905 + (TAA)n Simple_repeat Simple_repeat 1 25 0 312 263 158 0 chr5 179003252 179003293 -20626857 - L1ME4a LINE L1 -27 6094 6061 263 27 0 27 chr5 179003293 179003330 -20626820 + (CA)n Simple_repeat Simple_repeat 1 36 0 312 263 158 0 chr5 179003330 179003402 -20626748 - L1ME4a LINE L1 -60 6061 5963 2622 177 67 86 chr5 179004112 179004879 -20625271 - L1MC4 LINE L1 -384 7658 6907 363 242 44 0 chr5 179004934 179005025 -20625125 - HAL1 LINE L1 -1114 1393 1299 569 232 106 71 chr5 179005045 179005424 -20624726 - HAL1 LINE L1 -1294 1213 822 * 2035 153 77 25 chr5 179005415 179005680 -20624470 - L1MC1 LINE L1 0 6333 6038 2178 114 0 3 chr5 179005680 179005986 -20624164 + AluSx SINE Alu 2 306 -6 2035 153 77 25 chr5 179005986 179006125 -20624025 - L1MC1 LINE L1 -295 6038 5908 810 317 92 0 chr5 179006126 179006464 -20623686 - HAL1 LINE L1 -1668 839 471 282 184 0 0 chr5 179006466 179006515 -20623635 - HAL1 LINE L1 -2108 399 351 1073 154 11 11 chr5 179006528 179006703 -20623447 - AluSg/x SINE Alu -7 305 131 700 282 63 19 chr5 179006714 179007033 -20623117 - HAL1 LINE L1 -2173 334 2 487 329 33 5 chr5 179007149 179007359 -20622791 + MIR SINE MIR 35 250 -12 180 111 0 0 chr5 179007567 179007594 -20622556 + (TTCA)n Simple_repeat Simple_repeat 4 30 0 454 297 44 80 chr5 179007616 179007728 -20622422 - L1MC5 LINE L1 -179 7782 7668 2097 104 0 74 chr5 179007728 179008066 -20622084 + AluSq SINE Alu 1 313 0 454 297 44 80 chr5 179008066 179008455 -20621695 - L1MC5 LINE L1 -293 7668 7299 21 0 0 0 chr5 179008605 179008626 -20621524 + AT_rich Low_complexity Low_complexity 1 21 0 1826 222 43 28 chr5 179008648 179009108 -20621042 + MLT1C LTR MaLR 1 467 0 459 271 26 67 chr5 179009109 179009378 -20620772 - L1MC5 LINE L1 -747 7214 6957 314 294 64 28 chr5 179010022 179010131 -20620019 + L2 LINE L2 3141 3253 -19 315 0 0 0 chr5 179010410 179010445 -20619705 + (TG)n Simple_repeat Simple_repeat 1 35 0 664 228 442 6 chr5 179010453 179010910 -20619240 - LTR50 LTR ERVL -2 793 537 1348 143 0 37 chr5 179010910 179011126 -20619024 + L1PA15 LINE L1 5954 6161 -4 664 228 442 6 chr5 179011126 179011213 -20618937 - LTR50 LTR ERVL -258 537 11 3682 194 40 38 chr5 179011314 179011649 -20618501 - L1MB7 LINE L1 -16 6168 5835 2132 117 3 7 chr5 179011649 179011948 -20618202 - AluSx SINE Alu -14 298 1 3682 194 40 38 chr5 179011948 179012448 -20617702 - L1MB7 LINE L1 -349 5835 5332 1113 226 0 0 chr5 179012448 179012656 -20617494 - AluJb SINE Alu -11 301 94 2801 204 102 6 chr5 179012658 179013341 -20616809 - L1MB7 LINE L1 -817 5329 4581 233 271 73 52 chr5 179013537 179013633 -20616517 + L2 LINE L2 3156 3253 -19 757 220 60 0 chr5 179013802 179013984 -20616166 + L1MB7 LINE L1 5992 6184 0 1094 223 0 0 chr5 179014679 179014903 -20615247 + AluJb SINE Alu 88 311 -1 417 287 57 19 chr5 179015059 179015216 -20614934 - MIR SINE MIR -79 183 21 23 33 0 0 chr5 179016456 179016486 -20613664 + AT_rich Low_complexity Low_complexity 1 30 0 364 302 144 43 chr5 179017367 179017715 -20612435 + Charlie8 DNA MER1_type 46 428 -1989 337 268 29 36 chr5 179019116 179019254 -20610896 + MIR SINE MIR 11 147 -115 310 297 30 30 chr5 179019256 179019357 -20610793 - MIR SINE MIR -148 114 14 187 206 44 0 chr5 179019889 179019957 -20610193 + CT-rich Low_complexity Low_complexity 3 73 0 506 336 91 13 chr5 179020481 179020713 -20609437 + MIR SINE MIR 12 261 -1 925 290 83 42 chr5 179022198 179022584 -20607566 - LTR16A LTR ERVL -30 420 19 280 289 56 11 chr5 179022619 179022709 -20607441 - L2 LINE L2 -15 3257 3164 453 276 46 0 chr5 179022732 179022884 -20607266 - MIR SINE MIR -8 254 96 1347 189 18 57 chr5 179023048 179023381 -20606769 + MER33 DNA MER1_type 1 320 -4 183 42 0 0 chr5 179024349 179024373 -20605777 + (TA)n Simple_repeat Simple_repeat 2 25 0 517 262 61 6 chr5 179025023 179025187 -20604963 + MIR SINE MIR 72 244 -18 942 81 0 0 chr5 179025290 179025414 -20604736 - L1MA4 LINE L1 -11 6289 6166 2013 114 59 0 chr5 179025454 179025743 -20604407 + AluSq SINE Alu 1 306 -7 333 258 67 11 chr5 179025863 179025952 -20604198 - MLT1H1 LTR MaLR -402 153 60 1544 182 0 81 chr5 179025975 179026283 -20603867 - AluJo SINE Alu -17 285 3 1198 13 13 7 chr5 179026305 179026457 -20603693 + (TTTC)n Simple_repeat Simple_repeat 4 156 0 452 111 37 37 chr5 179026458 179026566 -20603584 + CT-rich Low_complexity Low_complexity 3 110 0 284 381 57 24 chr5 179026789 179026999 -20603151 - L3 LINE CR1 -578 999 783 706 302 62 32 chr5 179027269 179027702 -20602448 - L1M4 LINE L1 -1781 4365 3933 2337 211 30 11 chr5 179027702 179028344 -20601806 - L1ME2 LINE L1 -338 5826 3813 933 161 113 69 chr5 179028367 179028504 -20601646 - L1M4 LINE L1 -835 5311 5182 2227 119 0 10 chr5 179028504 179028807 -20601343 + AluSc SINE Alu 1 300 -9 933 161 113 69 chr5 179028807 179029004 -20601146 - L1M4 LINE L1 -964 5182 4962 350 292 96 44 chr5 179029011 179029377 -20600773 - L1ME2 LINE L1 -2375 3771 3387 1406 93 71 31 chr5 179029385 179029610 -20600540 + AluSg/x SINE Alu 66 299 -11 335 280 68 42 chr5 179029766 179029884 -20600266 + L2 LINE L2 2493 2613 -701 422 265 0 86 chr5 179029989 179030140 -20600010 + L2 LINE L2 2634 2771 -543 2105 138 20 0 chr5 179031250 179031554 -20598596 - AluSx SINE Alu -2 310 1 3631 93 8 6 chr5 179031712 179032207 -20597943 - L1PA15 LINE L1 -8 6157 5662 1946 126 10 7 chr5 179032250 179032543 -20597607 - L1PA15 LINE L1 -492 5673 5380 1766 144 70 0 chr5 179033667 179033952 -20596198 - AluJb SINE Alu -7 305 1 495 196 116 0 chr5 179033973 179034085 -20596065 + MER5C DNA MER1_type 1 125 -199 380 135 14 0 chr5 179034356 179034430 -20595720 + (TA)n Simple_repeat Simple_repeat 1 75 0 330 26 0 0 chr5 179034430 179034469 -20595681 + (GA)n Simple_repeat Simple_repeat 2 40 0 22 35 0 0 chr5 179035173 179035202 -20594948 + AT_rich Low_complexity Low_complexity 1 29 0 6768 68 25 19 chr5 179035202 179036763 -20593387 - SVA Other Other -760 1386 12 194 241 69 17 chr5 179037480 179037538 -20592612 + L2 LINE L2 3209 3269 -3 1790 179 0 3 chr5 179037967 179038252 -20591898 - AluJb SINE Alu -28 284 1 223 213 0 49 chr5 179038720 179038781 -20591369 - MER5A DNA MER1_type -5 184 127 598 225 56 19 chr5 179038783 179038943 -20591207 + L1MEd LINE L1 2 167 -5952 258 175 127 0 chr5 179039513 179039576 -20590574 + L1MEd LINE L1 770 840 -5279 258 311 38 19 chr5 179039576 179039682 -20590468 + MER5A DNA MER1_type 60 167 -22 221 282 61 46 chr5 179039579 179039710 -20590440 - MER5A DNA MER1_type -50 139 7 * 234 162 18 153 chr5 179040971 179041082 -20589068 - L1ME4a LINE L1 -91 6030 5935 328 203 188 65 chr5 179041305 179041443 -20588707 + L2 LINE L2 3159 3313 0 514 275 68 33 chr5 179041523 179041782 -20588368 - L1ME4a LINE L1 -392 5729 5460 1364 212 3 33 chr5 179042331 179042638 -20587512 - AluJo SINE Alu -13 299 2 2097 134 0 0 chr5 179042690 179042980 -20587170 + AluSx SINE Alu 3 292 -20 219 273 60 116 chr5 179043128 179043344 -20586806 + MIR SINE MIR 3 206 -56 7509 28 0 1 chr5 179043453 179045098 -20585052 - L1PA4 LINE L1 -2 6153 4512 393 298 92 14 chr5 179045186 179045327 -20584823 + MIR SINE MIR 13 164 -98 184 278 93 21 chr5 179045890 179045987 -20584163 + MIR SINE MIR 156 259 -3 580 226 98 28 chr5 179047840 179048126 -20582024 - MLT1G1 LTR MaLR 0 595 232 184 250 25 0 chr5 179050053 179050093 -20580057 + MIR SINE MIR 48 88 -174 1544 207 8 27 chr5 179050097 179050481 -20579669 - MLT1A1 LTR MaLR 0 365 1 402 304 29 7 chr5 179050494 179050632 -20579518 + MIR SINE MIR 102 242 -20 210 219 0 0 chr5 179053930 179053971 -20576179 - MIR SINE MIR -2 260 220 774 96 0 32 chr5 179054410 179054535 -20575615 - AluJb SINE Alu -1 311 191 474 268 33 78 chr5 179054690 179054722 -20575428 - MIR SINE MIR -65 197 165 1555 146 9 115 chr5 179054722 179055071 -20575079 + AluJo SINE Alu 1 312 0 474 268 33 78 chr5 179055071 179055191 -20574959 - MIR SINE MIR -97 165 52 204 268 18 18 chr5 179055246 179055302 -20574848 - MIR SINE MIR -2 260 205 365 306 0 0 chr5 179055348 179055459 -20574691 + MER117 DNA MER1_type 50 160 -37 555 296 100 21 chr5 179055520 179055760 -20574390 + MIR SINE MIR 2 260 -2 2367 94 3 0 chr5 179057053 179057352 -20572798 + AluSc SINE Alu 1 300 -9 225 0 0 0 chr5 179057851 179057876 -20572274 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2251 111 0 0 chr5 179057880 179058169 -20571981 - AluSx SINE Alu -23 289 1 461 288 44 44 chr5 179058682 179058842 -20571308 - MIR SINE MIR -90 172 13 371 348 82 6 chr5 179058964 179059122 -20571028 - L2 LINE L2 0 3272 3103 318 313 198 0 chr5 179059275 179059467 -20570683 - MIR SINE MIR -1 261 32 2098 146 0 0 chr5 179060058 179060359 -20569791 - AluSx SINE Alu -11 301 1 189 147 0 0 chr5 179061890 179061924 -20568226 + (TA)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr5 179062687 179062708 -20567442 + AT_rich Low_complexity Low_complexity 1 21 0 358 237 82 35 chr5 179062913 179063063 -20567087 + MIR SINE MIR 99 253 -9 2432 168 45 0 chr5 179063400 179063847 -20566303 - MLT1C LTR MaLR 0 467 1 255 298 122 63 chr5 179064011 179064216 -20565934 - MIR SINE MIR -6 256 40 313 315 87 105 chr5 179065533 179065981 -20564169 + L2 LINE L2 2830 3269 -3 845 296 77 34 chr5 179066149 179066619 -20563531 + MLT1L LTR MaLR 126 615 0 197 321 83 46 chr5 179066705 179066814 -20563336 + MIR SINE MIR 16 128 -80 703 298 18 25 chr5 179067759 179068038 -20562112 - MLT1J LTR MaLR -161 350 74 2148 127 0 7 chr5 179068165 179068465 -20561685 - AluSx SINE Alu -14 298 1 605 157 7 34 chr5 179070065 179070212 -20559938 + CT-rich Low_complexity Low_complexity 2 144 0 219 36 0 0 chr5 179070212 179070240 -20559910 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 304 257 70 38 chr5 179070443 179070546 -20559604 - MIR3 SINE MIR -32 176 69 830 240 96 37 chr5 179070567 179070942 -20559208 - L1ME3A LINE L1 -5 6165 5769 378 0 0 0 chr5 179072083 179072125 -20558025 + (TG)n Simple_repeat Simple_repeat 2 43 0 266 233 50 0 chr5 179073162 179073222 -20556928 - MLT1J LTR MaLR -202 309 247 2255 91 0 0 chr5 179073648 179073964 -20556186 + AluSx SINE Alu 1 316 0 321 135 0 0 chr5 179074087 179074139 -20556011 + (TATATG)n Simple_repeat Simple_repeat 6 57 0 510 295 53 62 chr5 179074431 179074675 -20555475 + L2 LINE L2 2453 2694 -620 309 246 0 0 chr5 179074695 179074764 -20555386 + MER69 DNA AcHobo 460 528 -1998 306 0 0 0 chr5 179076476 179076510 -20553640 + (TG)n Simple_repeat Simple_repeat 2 35 0 396 293 0 9 chr5 179076909 179077025 -20553125 - MIR SINE MIR -6 256 142 673 289 73 35 chr5 179077025 179077395 -20552755 - MLT1J1 LTR MaLR 0 446 63 319 246 36 0 chr5 179077881 179077991 -20552159 + (TA)n Simple_repeat Simple_repeat 2 115 0 25 75 0 0 chr5 179078035 179078088 -20552062 + AT_rich Low_complexity Low_complexity 1 53 0 701 161 9 0 chr5 179078088 179078200 -20551950 - FLAM_C SINE Alu -18 125 13 2251 103 3 7 chr5 179078480 179078781 -20551369 - AluSc SINE Alu -9 300 1 230 254 175 0 chr5 179078805 179078919 -20551231 - L1ME3A LINE L1 -226 5944 5811 327 226 165 0 chr5 179079184 179079299 -20550851 - MLT1J1 LTR MaLR -264 182 49 1859 247 110 10 chr5 179079347 179079954 -20550196 - L1ME3 LINE L1 -17 6145 5478 669 197 34 7 chr5 179079967 179080114 -20550036 - MER58B DNA MER1_type 0 341 191 548 294 120 18 chr5 179080124 179080355 -20549795 - MLT1J LTR MaLR -207 304 39 1990 79 0 12 chr5 179080355 179080609 -20549541 + AluY SINE Alu 60 310 -1 548 294 120 18 chr5 179080609 179080653 -20549497 - MLT1J LTR MaLR -472 39 1 361 322 73 50 chr5 179080663 179080915 -20549235 - L1MEd LINE L1 -4894 1225 961 2328 95 0 3 chr5 179080915 179081219 -20548931 - AluSg SINE Alu -5 305 3 361 322 73 50 chr5 179081219 179081308 -20548842 - L1MEd LINE L1 -5158 961 876 2624 42 0 0 chr5 179081533 179081839 -20548311 - AluY SINE Alu -5 306 1 2102 150 0 6 chr5 179082287 179082601 -20547549 - AluSx SINE Alu 0 312 1 295 257 136 7 chr5 179083228 179083368 -20546782 - L1ME4a LINE L1 0 6121 5964 287 315 87 0 chr5 179083391 179083483 -20546667 - MIR SINE MIR -150 112 13 2138 134 0 0 chr5 179084933 179085225 -20544925 - AluSx SINE Alu -20 292 1 315 319 49 54 chr5 179086525 179086710 -20543440 - MIR3 SINE MIR 0 208 25 294 364 30 23 chr5 179087057 179087189 -20542961 - MIR SINE MIR -114 148 16 22 0 0 0 chr5 179087764 179087786 -20542364 + AT_rich Low_complexity Low_complexity 1 22 0 201 203 29 87 chr5 179088564 179088702 -20541448 + (TTTAG)n Simple_repeat Simple_repeat 3 132 0 2060 225 19 16 chr5 179089299 179089811 -20540339 - LTR40a LTR ERVL -5 514 1 207 114 0 0 chr5 179090249 179090284 -20539866 + (TG)n Simple_repeat Simple_repeat 1 35 0 * 252 0 0 0 chr5 179090283 179090311 -20539839 + (GA)n Simple_repeat Simple_repeat 1 28 0 6950 43 0 0 chr5 179090403 179091240 -20538910 + L1PA5 LINE L1 5315 6151 -3 2055 90 90 0 chr5 179092752 179093030 -20537120 + AluSx SINE Alu 5 307 -5 908 186 39 13 chr5 179093226 179093457 -20536693 + MER96B DNA MER1_type? 1 237 -180 833 239 5 11 chr5 179093647 179093835 -20536315 - MLT1B LTR MaLR -16 374 188 304 188 12 12 chr5 179093835 179093920 -20536230 + GA-rich Low_complexity Low_complexity 1 85 0 763 141 5 76 chr5 179093941 179094125 -20536025 - MLT1B LTR MaLR -200 174 4 180 259 74 19 chr5 179094916 179094970 -20535180 + L2 LINE L2 2083 2139 -1175 335 294 149 31 chr5 179095644 179095838 -20534312 - MIR SINE MIR -7 255 39 621 90 0 0 chr5 179096023 179096112 -20534038 + (GA)n Simple_repeat Simple_repeat 2 90 0 795 176 103 114 chr5 179096337 179096627 -20533523 + MER2 DNA MER2_type 59 345 0 1891 69 4 8 chr5 179096864 179097136 -20533014 - AluY SINE Alu 0 307 37 2778 203 37 24 chr5 179097217 179097844 -20532306 + LTR27 LTR ERV1 2 636 0 2427 271 72 38 chr5 179098500 179099039 -20531111 - HAL1 LINE L1 -83 2424 1905 2176 138 0 6 chr5 179099039 179099350 -20530800 - AluSx SINE Alu -3 309 1 2427 271 72 38 chr5 179099350 179100103 -20530047 - HAL1 LINE L1 -602 1905 1088 2394 159 49 40 chr5 179100200 179100771 -20529379 - L1MB7 LINE L1 -16 6666 6091 979 164 0 0 chr5 179100771 179100917 -20529233 - FRAM SINE Alu -17 159 14 2099 200 64 2 chr5 179100933 179101706 -20528444 - L1MB7 LINE L1 -573 6103 5286 3700 174 30 18 chr5 179101708 179102381 -20527769 + MER54B LTR ERVL 1 681 -112 567 208 0 0 chr5 179102416 179102546 -20527604 + L1 LINE L1 2902 3031 -3115 * 4149 265 100 30 chr5 179102540 179102758 -20527392 - L1MB7 LINE L1 -1489 5155 4954 1978 128 0 49 chr5 179102758 179103085 -20527065 - AluJb SINE Alu -1 311 1 4149 265 100 30 chr5 179103085 179103439 -20526711 - L1MB7 LINE L1 -1690 4954 4626 1700 161 19 59 chr5 179103439 179103762 -20526388 - AluSx SINE Alu 0 312 3 4149 265 100 30 chr5 179103762 179105477 -20524673 - L1MB7 LINE L1 -2018 4626 2703 1372 209 37 11 chr5 179105526 179105876 -20524274 - L1MA4 LINE L1 -4 6296 5938 371 166 17 79 chr5 179105878 179106077 -20524073 - L1MB7 LINE L1 -3952 2693 2521 1067 197 25 4 chr5 179106137 179106376 -20523774 - L1MB7 LINE L1 -6283 259 16 342 255 101 58 chr5 179106429 179106617 -20523533 - HAL1 LINE L1 -1448 1059 864 375 282 24 127 chr5 179106634 179106781 -20523369 - MIR SINE MIR -2 260 148 2911 6 0 0 chr5 179106781 179107095 -20523055 + AluYb8 SINE Alu 1 314 -4 375 282 24 127 chr5 179107095 179107199 -20522951 - MIR SINE MIR -114 148 35 506 298 63 0 chr5 179107317 179107555 -20522595 - HAL1 LINE L1 -2243 264 12 1510 293 64 26 chr5 179107561 179108343 -20521807 - L1MEd LINE L1 -5282 837 26 757 271 98 78 chr5 179108438 179108940 -20521210 + L3 LINE CR1 956 1467 -110 966 274 8 4 chr5 179108956 179109197 -20520953 + MIR SINE MIR 11 252 -10 357 113 0 16 chr5 179109285 179109347 -20520803 - MLT1D LTR MaLR 0 505 445 417 169 14 0 chr5 179109353 179109424 -20520726 - AluS SINE Alu -233 76 5 1501 98 5 0 chr5 179109426 179109668 -20520482 + AluSc SINE Alu 87 329 0 1305 220 83 40 chr5 179109671 179110094 -20520056 - MLT1D LTR MaLR -64 441 1 416 306 84 35 chr5 179110440 179110724 -20519426 - MLT1K LTR MaLR 0 588 291 249 369 56 19 chr5 179110760 179110920 -20519230 - MLT1K LTR MaLR -416 172 7 359 339 55 22 chr5 179112048 179112231 -20517919 + MER5A DNA MER1_type 1 189 0 1477 253 140 2 chr5 179112231 179112689 -20517461 - LTR33 LTR ERVL 0 521 1 490 278 20 33 chr5 179113989 179114140 -20516010 + MIR SINE MIR 52 200 -62 1973 145 3 28 chr5 179114146 179114464 -20515686 + AluJb SINE Alu 1 310 -2 534 273 63 44 chr5 179114798 179115003 -20515147 + MIR SINE MIR 48 256 -6 364 300 131 39 chr5 179115189 179115715 -20514435 + L2 LINE L2 2361 3226 -87 2119 128 9 0 chr5 179116012 179116340 -20513810 + L1PB4 LINE L1 5815 6145 -11 2497 58 0 16 chr5 179116417 179116725 -20513425 + AluY SINE Alu 1 303 -8 1986 99 111 15 chr5 179116817 179117159 -20512991 + THE1C LTR MaLR 1 375 0 217 322 23 23 chr5 179117159 179117246 -20512904 + MIR SINE MIR 36 122 -140 * 637 307 118 43 chr5 179117230 179117502 -20512648 + L2 LINE L2 2889 3200 -113 204 40 0 0 chr5 179117502 179117527 -20512623 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 637 307 118 43 chr5 179117527 179117645 -20512505 + L2 LINE L2 3200 3308 -5 1631 143 69 37 chr5 179117869 179118219 -20511931 - MER46B DNA MER2_type 0 236 1 1157 249 86 113 chr5 179118278 179118413 -20511737 + L2 LINE L2 2417 2554 -759 6121 81 69 31 chr5 179118413 179119710 -20510440 - L1PA10 LINE L1 0 6168 4845 292 71 0 0 chr5 179119710 179119752 -20510398 - MADE1 DNA Mariner -38 42 1 1157 249 86 113 chr5 179119752 179120202 -20509948 + L2 LINE L2 2553 3031 -282 3185 114 37 2 chr5 179120202 179120720 -20509430 + L1MA4A LINE L1 5767 6302 -1 1157 249 86 113 chr5 179120720 179120996 -20509154 + L2 LINE L2 3031 3313 0 8746 29 4 0 chr5 179121236 179122376 -20507774 - L1P LINE L1 -2609 3537 2393 3573 111 20 22 chr5 179122482 179122601 -20507549 + L1PA16 LINE L1 5380 5498 -668 1901 170 7 0 chr5 179122601 179122901 -20507249 + AluSx SINE Alu 3 304 -8 3573 111 20 22 chr5 179122901 179123377 -20506773 + L1PA16 LINE L1 5498 5974 -192 826 239 0 0 chr5 179123379 179123538 -20506612 + AluJb SINE Alu 138 296 -16 901 199 31 15 chr5 179123538 179123734 -20506416 + L1PA16 LINE L1 5959 6157 -9 211 304 0 0 chr5 179123769 179123825 -20506325 + (TATATG)n Simple_repeat Simple_repeat 5 60 0 214 286 174 0 chr5 179124751 179124849 -20505301 + MIR SINE MIR 67 181 -81 193 417 9 19 chr5 179124998 179125106 -20505044 - MIR SINE MIR -68 140 34 456 372 52 10 chr5 179125240 179125624 -20504526 - LTR33 LTR ERVL -111 410 11 788 185 119 0 chr5 179125905 179126056 -20504094 - FAM SINE Alu -5 170 2 2160 124 7 3 chr5 179126083 179126382 -20503768 - AluSx SINE Alu -10 302 3 2214 105 3 0 chr5 179126389 179126683 -20503467 - AluSx SINE Alu -17 295 1 219 309 0 0 chr5 179127389 179127457 -20502693 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 3476 180 133 27 chr5 179127548 179128841 -20501309 + L1MC3 LINE L1 6422 7977 -18 2085 132 14 0 chr5 179128850 179129146 -20501004 + AluSx SINE Alu 1 300 -12 1542 17 11 0 chr5 179130113 179130309 -20499841 - AluY SINE Alu 0 330 133 2255 101 0 3 chr5 179130309 179130606 -20499544 - AluSg SINE Alu -12 298 3 2560 43 0 0 chr5 179130920 179131219 -20498931 - AluY SINE Alu -12 299 1 2102 150 0 6 chr5 179131667 179131981 -20498169 - AluSx SINE Alu 0 312 1 295 257 136 7 chr5 179132608 179132748 -20497402 - L1ME4a LINE L1 0 6121 5964 287 315 87 0 chr5 179132771 179132863 -20497287 - MIR SINE MIR -150 112 13 2138 134 0 0 chr5 179134313 179134605 -20495545 - AluSx SINE Alu -20 292 1 317 306 32 57 chr5 179135905 179136062 -20494088 - MIR3 SINE MIR 0 208 56 294 364 30 23 chr5 179136437 179136569 -20493581 - MIR SINE MIR -114 148 16 22 0 0 0 chr5 179137144 179137166 -20492984 + AT_rich Low_complexity Low_complexity 1 22 0 201 203 29 87 chr5 179137944 179138082 -20492068 + (TTTAG)n Simple_repeat Simple_repeat 3 132 0 2060 225 19 16 chr5 179138679 179139191 -20490959 - LTR40a LTR ERVL -5 514 1 207 114 0 0 chr5 179139629 179139664 -20490486 + (TG)n Simple_repeat Simple_repeat 1 35 0 * 252 0 0 0 chr5 179139663 179139691 -20490459 + (GA)n Simple_repeat Simple_repeat 1 28 0 6809 50 0 0 chr5 179139783 179140618 -20489532 + L1PA5 LINE L1 5315 6149 -5 21 0 0 0 chr5 179140618 179140639 -20489511 + AT_rich Low_complexity Low_complexity 1 21 0 2055 90 90 0 chr5 179142132 179142410 -20487740 + AluSx SINE Alu 5 307 -5 908 186 39 13 chr5 179142606 179142837 -20487313 + MER96B DNA MER1_type? 1 237 -180 833 239 5 11 chr5 179143027 179143215 -20486935 - MLT1B LTR MaLR -16 374 188 304 188 12 12 chr5 179143215 179143300 -20486850 + GA-rich Low_complexity Low_complexity 1 85 0 763 141 5 76 chr5 179143321 179143505 -20486645 - MLT1B LTR MaLR -200 174 4 180 259 74 19 chr5 179144296 179144350 -20485800 + L2 LINE L2 2083 2139 -1175 336 294 149 31 chr5 179145025 179145219 -20484931 - MIR SINE MIR -7 255 39 621 90 0 0 chr5 179145404 179145493 -20484657 + (GA)n Simple_repeat Simple_repeat 2 90 0 847 172 103 114 chr5 179145718 179146008 -20484142 + MER2 DNA MER2_type 59 345 0 1905 69 4 8 chr5 179146245 179146517 -20483633 - AluY SINE Alu 0 307 37 2785 203 37 24 chr5 179146598 179147225 -20482925 + LTR27 LTR ERV1 2 636 0 2767 269 73 39 chr5 179147881 179148420 -20481730 - HAL1 LINE L1 -83 2424 1905 2141 138 0 6 chr5 179148420 179148731 -20481419 - AluSx SINE Alu -3 309 1 2767 269 73 39 chr5 179148731 179149484 -20480666 - HAL1 LINE L1 -602 1905 1088 2440 159 49 40 chr5 179149581 179150152 -20479998 - L1MB7 LINE L1 -16 6168 5593 970 164 0 0 chr5 179150152 179150298 -20479852 - FRAM SINE Alu -17 159 14 2253 200 64 2 chr5 179150314 179151087 -20479063 - L1MB7 LINE L1 -573 5605 4788 3963 174 30 18 chr5 179151089 179151762 -20478388 + MER54B LTR ERVL 1 681 -112 569 223 0 0 chr5 179151797 179151927 -20478223 + L1 LINE L1 2902 3031 -3115 * 833 208 30 9 chr5 179151921 179152152 -20477998 - L1MB7 LINE L1 -1489 4657 4422 2163 120 3 0 chr5 179152156 179152455 -20477695 - AluY SINE Alu -11 300 1 220 419 59 16 chr5 179152469 179152655 -20477495 - L2 LINE L2 -71 3201 3008 573 15 0 0 chr5 179152694 179152760 -20477390 + (TCTA)n Simple_repeat Simple_repeat 3 68 0 185 337 58 0 chr5 179152825 179152911 -20477239 - L2 LINE L2 -661 2653 2563 1472 166 65 0 chr5 179152999 179153306 -20476844 - L1 LINE L1 -1370 4776 4450 354 267 12 0 chr5 179153611 179153697 -20476453 - L2 LINE L2 0 3313 3227 229 286 0 16 chr5 179153708 179153771 -20476379 + (CATA)n Simple_repeat Simple_repeat 2 63 0 * 340 292 18 18 chr5 179153729 179153842 -20476308 + (TATG)n Simple_repeat Simple_repeat 3 115 0 616 28 0 0 chr5 179155243 179155315 -20474835 + L1PA5 LINE L1 6075 6146 -8 29 28 0 0 chr5 179155826 179155862 -20474288 + AT_rich Low_complexity Low_complexity 1 36 0 29 28 0 0 chr5 179155877 179155913 -20474237 + AT_rich Low_complexity Low_complexity 1 36 0 276 212 15 0 chr5 179155915 179155981 -20474169 - L1ME4a LINE L1 -3 6118 6052 4219 249 27 56 chr5 179155988 179156419 -20473731 + L1M4 LINE L1 3239 3681 -2465 1936 159 0 0 chr5 179156419 179156708 -20473442 + AluJb SINE Alu 1 289 -23 4219 249 27 56 chr5 179156708 179157946 -20472204 + L1M4 LINE L1 3681 4859 -1287 8100 194 86 7 chr5 179157969 179159031 -20471119 - L1MC3 LINE L1 -3 7782 6806 273 57 0 0 chr5 179159031 179159066 -20471084 + (TG)n Simple_repeat Simple_repeat 2 36 0 8100 194 86 7 chr5 179159066 179159855 -20470295 - L1MC3 LINE L1 -979 6806 5784 1474 174 88 80 chr5 179159863 179160449 -20469701 + L1M4 LINE L1 4857 5426 -746 902 101 0 43 chr5 179160460 179160599 -20469551 + FLAM_C SINE Alu 1 133 0 783 301 167 38 chr5 179160605 179161054 -20469096 + L2 LINE L2 2806 3312 -1 1446 202 0 32 chr5 179161541 179161818 -20468332 + AluJo SINE Alu 7 274 -38 393 302 80 77 chr5 179162517 179162550 -20467600 - L2 LINE L2 -339 2975 2944 248 70 23 0 chr5 179162550 179162593 -20467557 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 393 302 80 77 chr5 179162593 179162960 -20467190 - L2 LINE L2 -370 2944 2574 292 227 0 93 chr5 179162967 179163064 -20467086 - L2 LINE L2 -676 2638 2551 852 293 111 20 chr5 179163793 179164233 -20465917 + L2 LINE L2 2817 3296 -17 261 130 101 29 chr5 179164255 179164324 -20465826 - MIR SINE MIR -70 192 119 22 94 0 0 chr5 179166064 179166128 -20464022 + AT_rich Low_complexity Low_complexity 1 64 0 877 243 65 24 chr5 179166152 179166399 -20463751 - MIR SINE MIR -5 257 1 2045 145 39 25 chr5 179166946 179167305 -20462845 + THE1B LTR MaLR 1 364 0 355 217 25 42 chr5 179167841 179167961 -20462189 + L1ME LINE L1 5386 5503 -663 406 19 0 0 chr5 179168652 179168705 -20461445 - L1PA2 LINE L1 0 6155 6103 6049 16 3 0 chr5 179168705 179169396 -20460754 + L1PA2 LINE L1 5404 6096 -59 1428 214 51 43 chr5 179169433 179169848 -20460302 - MLT2C2 LTR ERVL -9 455 38 3432 177 51 20 chr5 179169857 179170542 -20459608 - ERVL-C2 LTR ERVL 0 5764 5059 510 258 37 45 chr5 179173480 179173748 -20456402 + L1MA9 LINE L1 6006 6271 -41 250 337 0 30 chr5 179173773 179173874 -20456276 - MIR SINE MIR -148 114 17 2330 73 3 10 chr5 179175868 179176169 -20453981 - AluSx SINE Alu -13 299 1 23 0 0 0 chr5 179176722 179176745 -20453405 + AT_rich Low_complexity Low_complexity 1 23 0 531 192 40 40 chr5 179177693 179177818 -20452332 + L2 LINE L2 3189 3313 0 220 279 0 51 chr5 179177873 179177952 -20452198 + L2 LINE L2 3186 3260 -12 3236 99 2 2 chr5 179178166 179178622 -20451528 + L1PA13 LINE L1 5333 5788 -380 343 200 9 9 chr5 179178623 179178728 -20451422 + (TA)n Simple_repeat Simple_repeat 1 105 0 252 0 0 0 chr5 179178750 179178778 -20451372 + (CA)n Simple_repeat Simple_repeat 2 29 0 2489 95 11 5 chr5 179178778 179179146 -20451004 + L1PA13 LINE L1 5793 6162 -1 514 278 95 53 chr5 179179220 179179483 -20450667 + L2 LINE L2 3039 3312 -1 225 329 24 12 chr5 179182250 179182335 -20447815 + MIR SINE MIR 28 113 -149 284 376 30 15 chr5 179182409 179182542 -20447608 + MER5A DNA MER1_type 55 189 0 265 302 123 0 chr5 179182918 179183024 -20447126 + L2 LINE L2 3150 3268 -4 2042 111 0 32 chr5 179183838 179184153 -20445997 - AluY SINE Alu -6 305 1 2124 128 9 0 chr5 179184230 179184558 -20445592 - L1PB4 LINE L1 -11 6145 5815 359 300 131 39 chr5 179184855 179185381 -20444769 - L2 LINE L2 -87 3226 2361 536 256 74 45 chr5 179185596 179185772 -20444378 - MIR SINE MIR -34 228 48 1940 145 3 28 chr5 179186106 179186424 -20443726 - AluJb SINE Alu -2 310 1 286 284 39 10 chr5 179186430 179186532 -20443618 - MIR SINE MIR -62 200 96 4668 96 8 0 chr5 179186632 179187268 -20442882 - THE1B-int LTR MaLR -939 641 1 1712 164 32 51 chr5 179187268 179187639 -20442511 - THE1B LTR MaLR 0 364 1 818 212 18 0 chr5 179187639 179187804 -20442346 - MST-int LTR MaLR -538 1113 946 762 281 19 8 chr5 179189691 179189954 -20440196 + L1MA9 LINE L1 6006 6271 -41 228 346 0 30 chr5 179189978 179190079 -20440071 - MIR SINE MIR -148 114 17 2327 80 3 7 chr5 179192072 179192374 -20437776 - AluSx SINE Alu -11 301 1 23 0 0 0 chr5 179192927 179192950 -20437200 + AT_rich Low_complexity Low_complexity 1 23 0 531 192 40 40 chr5 179193898 179194023 -20436127 + L2 LINE L2 3189 3313 0 220 279 0 51 chr5 179194078 179194157 -20435993 + L2 LINE L2 3186 3260 -12 3257 97 2 2 chr5 179194371 179194827 -20435323 + L1PA13 LINE L1 5333 5788 -380 343 200 9 9 chr5 179194828 179194933 -20435217 + (TA)n Simple_repeat Simple_repeat 1 105 0 252 0 0 0 chr5 179194955 179194983 -20435167 + (CA)n Simple_repeat Simple_repeat 2 29 0 2514 95 11 5 chr5 179194983 179195351 -20434799 + L1PA13 LINE L1 5793 6162 -1 494 281 95 53 chr5 179195425 179195688 -20434462 + L2 LINE L2 3039 3312 -1 225 329 24 12 chr5 179198458 179198543 -20431607 + MIR SINE MIR 28 113 -149 284 376 30 15 chr5 179198617 179198750 -20431400 + MER5A DNA MER1_type 55 189 0 265 302 123 0 chr5 179199126 179199232 -20430918 + L2 LINE L2 3150 3268 -4 1904 136 0 56 chr5 179200046 179200370 -20429780 - AluSx SINE Alu -6 306 1 669 226 50 6 chr5 179200590 179200771 -20429379 + MER5A DNA MER1_type 1 189 0 294 285 62 15 chr5 179200979 179201109 -20429041 + MIR SINE MIR 91 226 -36 384 302 24 16 chr5 179201165 179201291 -20428859 + L2 LINE L2 3187 3313 0 202 114 0 29 chr5 179201291 179201326 -20428824 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 1871 134 18 24 chr5 179202900 179203235 -20426915 - L1PB3 LINE L1 -3 6151 5819 548 269 60 35 chr5 179203864 179204065 -20426085 + MIR SINE MIR 20 225 -37 872 271 33 12 chr5 179205226 179205470 -20424680 - MIR SINE MIR -10 252 4 648 200 36 0 chr5 179205683 179205793 -20424357 + FLAM_A SINE Alu 1 114 -19 21 0 0 0 chr5 179205842 179205863 -20424287 + AT_rich Low_complexity Low_complexity 1 21 0 252 226 0 0 chr5 179205961 179206023 -20424127 - L1ME LINE L1 -322 5799 5738 1105 327 96 30 chr5 179206066 179206677 -20423473 + L2 LINE L2 2393 3037 -276 397 247 109 23 chr5 179207399 179207551 -20422599 - MIR3 SINE MIR -13 195 22 240 277 11 43 chr5 179208337 179208431 -20421719 - L1ME4a LINE L1 -53 6068 5978 318 50 0 0 chr5 179209280 179209320 -20420830 + (TA)n Simple_repeat Simple_repeat 2 41 0 25 51 0 0 chr5 179210293 179210332 -20419818 + AT_rich Low_complexity Low_complexity 1 39 0 333 272 58 29 chr5 179210332 179210505 -20419645 - L1ME4a LINE L1 -9 6112 5935 297 222 12 12 chr5 179210505 179210586 -20419564 - L1ME LINE L1 -393 5728 5648 21 0 0 0 chr5 179211638 179211659 -20418491 + AT_rich Low_complexity Low_complexity 1 21 0 320 336 85 52 chr5 179211661 179211932 -20418218 - L2 LINE L2 0 3272 2993 2303 263 87 23 chr5 179212633 179213655 -20416495 - L2 LINE L2 -10 3303 2222 344 259 65 50 chr5 179214621 179214760 -20415390 - L2 LINE L2 0 3313 3173 * 518 242 139 0 chr5 179214746 179214911 -20415239 - MIR SINE MIR 0 262 75 190 244 167 51 chr5 179215792 179215870 -20414280 - L2 LINE L2 -5 3267 3181 186 322 146 62 chr5 179216424 179216952 -20413198 - L2 LINE L2 -1035 2279 1708 2305 114 0 0 chr5 179217067 179217375 -20412775 + AluSx SINE Alu 3 310 -2 25 0 0 0 chr5 179218246 179218271 -20411879 + AT_rich Low_complexity Low_complexity 1 25 0 2230 122 0 3 chr5 179218271 179218646 -20411504 + AluSx SINE Alu 1 374 0 21 0 0 0 chr5 179218843 179218864 -20411286 + AT_rich Low_complexity Low_complexity 1 21 0 3745 208 10 10 chr5 179218884 179219580 -20410570 + L1PA13 LINE L1 2 697 -6090 * 5917 151 14 5 chr5 179219578 179220763 -20409387 + L1PA15 LINE L1 4960 6157 -8 929 55 78 8 chr5 179221389 179221517 -20408633 + MER85 DNA T2_type 1 137 -2 301 200 54 100 chr5 179222094 179222224 -20407926 - L1ME1 LINE L1 -7 6158 6032 246 299 13 0 chr5 179222303 179222380 -20407770 - MIR SINE MIR 0 262 185 1793 150 25 0 chr5 179222415 179222741 -20407409 - L1MA4 LINE L1 -8 6292 5959 311 353 133 7 chr5 179222782 179222932 -20407218 - MER91A DNA MER1_type 0 196 28 21 36 0 0 chr5 179223580 179223608 -20406542 + AT_rich Low_complexity Low_complexity 1 28 0 743 215 21 42 chr5 179224233 179224424 -20405726 + MER5A DNA MER1_type 3 189 0 670 286 96 38 chr5 179224490 179225081 -20405069 - L1ME LINE L1 -533 5637 5004 2443 216 75 35 chr5 179225140 179225857 -20404293 - L1ME1 LINE L1 -4 6162 5417 273 247 45 34 chr5 179225860 179225949 -20404201 - L1P LINE L1 -1156 4990 4901 286 294 0 37 chr5 179226375 179226511 -20403639 - L1ME4a LINE L1 0 6121 5991 29 0 0 0 chr5 179226761 179226790 -20403360 + AT_rich Low_complexity Low_complexity 1 29 0 1952 169 77 5 chr5 179227807 179228210 -20401940 + MSTB1 LTR MaLR 1 432 0 33 25 0 0 chr5 179228453 179228493 -20401657 + AT_rich Low_complexity Low_complexity 1 40 0 236 299 10 10 chr5 179228495 179228600 -20401550 - L1M3 LINE L1 -372 5799 5695 498 222 78 39 chr5 179228691 179228921 -20401229 - L1M3 LINE L1 -669 5501 5263 478 306 159 61 chr5 179228950 179229658 -20400492 - L1M3 LINE L1 -913 5233 4391 3771 103 43 0 chr5 179229658 179230221 -20399929 - L1PA13 LINE L1 -1 6162 5576 478 306 159 61 chr5 179230221 179230544 -20399606 - L1M3 LINE L1 -1755 4391 4101 409 341 48 14 chr5 179230695 179231050 -20399100 - L1M3 LINE L1 -2208 3938 3572 665 275 24 0 chr5 179231189 179231356 -20398794 + MER63A DNA MER1_type 38 208 -2 418 281 134 6 chr5 179231356 179231504 -20398646 - MLT2E LTR ERVL -436 192 23 241 289 11 11 chr5 179231586 179231676 -20398474 - L1M3 LINE L1 -2718 3428 3339 21 36 0 0 chr5 179231705 179231733 -20398417 + AT_rich Low_complexity Low_complexity 1 28 0 1052 204 124 73 chr5 179232076 179232512 -20397638 + MER39 LTR ERV1 250 707 0 2137 97 17 0 chr5 179232923 179233211 -20396939 + AluSc SINE Alu 1 293 -16 336 271 48 48 chr5 179233212 179233460 -20396690 - L1MEd LINE L1 -4750 1560 1139 444 241 91 21 chr5 179233546 179233787 -20396363 - L1MEd LINE L1 -4958 1161 904 319 327 45 19 chr5 179233946 179234102 -20396048 - MIR SINE MIR -71 191 32 789 313 33 0 chr5 179234783 179235023 -20395127 - MIR SINE MIR -1 261 14 198 0 0 0 chr5 179235130 179235152 -20394998 + (ACATG)n Simple_repeat Simple_repeat 3 24 0 1640 155 82 23 chr5 179235359 179235713 -20394437 - THE1C LTR MaLR 0 375 1 313 327 32 39 chr5 179235739 179235816 -20394334 + MIR SINE MIR 52 128 -134 1413 124 90 98 chr5 179235816 179236162 -20393988 - MER61A LTR ERV1 0 343 1 313 327 32 39 chr5 179236162 179236240 -20393910 + MIR SINE MIR 128 206 -56 432 0 0 0 chr5 179237492 179237540 -20392610 + (TG)n Simple_repeat Simple_repeat 2 49 0 194 62 31 0 chr5 179238017 179238049 -20392101 + (CA)n Simple_repeat Simple_repeat 1 33 0 238 309 49 25 chr5 179238096 179238177 -20391973 - L2 LINE L2 -6 3266 3184 213 114 0 0 chr5 179238244 179238257 -20391893 + (GAA)n Simple_repeat Simple_repeat 2 14 -22 2685 26 7 3 chr5 179238257 179238567 -20391583 + AluY SINE Alu 1 311 0 213 114 0 0 chr5 179238567 179238588 -20391562 + (GAA)n Simple_repeat Simple_repeat 13 36 0 2056 132 14 0 chr5 179239555 179239851 -20390299 - AluSx SINE Alu -12 300 1 3699 179 133 27 chr5 179239860 179241153 -20388997 - L1MC3 LINE L1 -18 7977 6422 219 309 0 0 chr5 179241244 179241312 -20388838 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 2195 106 3 0 chr5 179242017 179242310 -20387840 + AluSx SINE Alu 1 294 -18 2112 127 7 3 chr5 179242317 179242616 -20387534 + AluSx SINE Alu 3 302 -10 780 185 119 0 chr5 179242643 179242794 -20387356 + FAM SINE Alu 2 170 -5 569 374 51 10 chr5 179243075 179243465 -20386685 + LTR33 LTR ERVL 11 416 -105 198 417 9 19 chr5 179243593 179243701 -20386449 + MIR SINE MIR 34 140 -68 212 286 174 0 chr5 179243850 179243948 -20386202 - MIR SINE MIR -81 181 67 211 304 0 0 chr5 179244874 179244930 -20385220 + (CATATA)n Simple_repeat Simple_repeat 5 60 0 806 207 36 21 chr5 179244965 179245158 -20384992 - L1PA16 LINE L1 -9 6157 5962 839 235 0 0 chr5 179245158 179245320 -20384830 - AluJb SINE Alu -13 299 138 5729 159 21 13 chr5 179245322 179245798 -20384352 - L1PA16 LINE L1 -192 5974 5504 1846 173 7 0 chr5 179245798 179246098 -20384052 - AluSx SINE Alu -8 304 3 5729 159 21 13 chr5 179246098 179247506 -20382644 - L1PA16 LINE L1 -662 5504 4073 530 288 14 0 chr5 179248238 179248377 -20381773 + MIR SINE MIR 110 250 -12 29 47 0 0 chr5 179250340 179250383 -20379767 + AT_rich Low_complexity Low_complexity 1 43 0 6385 75 11 0 chr5 179250811 179251626 -20378524 - LTR12 LTR ERV1 0 826 3 2675 150 23 44 chr5 179252205 179252779 -20377371 - L1MA8 LINE L1 -7 6284 5723 6319 158 27 14 chr5 179252894 179254534 -20375616 - L1MA8 LINE L1 -566 5725 4063 241 227 0 136 chr5 179254896 179255028 -20375122 + LTR38B LTR ERV1 2 115 -495 346 265 159 46 chr5 179256573 179256853 -20373297 - L2 LINE L2 -247 3066 2770 424 204 36 66 chr5 179256999 179257166 -20372984 + MER104 DNA Tc2 19 180 0 2902 151 100 33 chr5 179257387 179257412 -20372738 + MER21A LTR ERV1 1 23 -908 2105 95 39 3 chr5 179257412 179257696 -20372454 - AluSc SINE Alu -15 294 1 2902 151 100 33 chr5 179257696 179258443 -20371707 + MER21A LTR ERV1 23 925 -6 374 300 43 29 chr5 179258692 179258832 -20371318 + L2 LINE L2 3169 3310 -3 965 258 95 23 chr5 179259334 179259640 -20370510 + MLT1G LTR MaLR 246 573 -17 33 25 0 0 chr5 179259838 179259878 -20370272 + AT_rich Low_complexity Low_complexity 1 40 0 442 304 106 83 chr5 179263057 179263838 -20366312 - L2 LINE L2 0 3272 2468 205 211 0 0 chr5 179264169 179264207 -20365943 + T-rich Low_complexity Low_complexity 1 38 0 243 299 78 0 chr5 179264720 179264797 -20365353 - MIR SINE MIR -89 173 91 274 288 0 0 chr5 179265095 179265154 -20364996 + MER91A DNA MER1_type 1 59 -137 453 226 29 10 chr5 179265471 179265573 -20364577 + MIR SINE MIR 125 228 -34 546 317 49 22 chr5 179266047 179266271 -20363879 - MLT1K LTR MaLR -357 231 2 196 288 45 0 chr5 179266487 179266553 -20363597 + MIR3 SINE MIR 130 198 -10 311 198 30 148 chr5 179266904 179266965 -20363185 + MLT1J1 LTR MaLR 247 314 -132 1992 203 89 9 chr5 179266965 179267413 -20362737 - MER66B LTR ERV1 -2 484 1 311 198 30 148 chr5 179267413 179267553 -20362597 + MLT1J1 LTR MaLR 314 424 -22 416 210 65 142 chr5 179267630 179267940 -20362210 + MER102b DNA MER1_type 55 340 -1 637 301 27 35 chr5 179269529 179269785 -20360365 - MIR SINE MIR -8 254 1 189 154 0 0 chr5 179270081 179270120 -20360030 + (GATTG)n Simple_repeat Simple_repeat 4 42 0 2650 120 30 26 chr5 179270188 179270614 -20359536 - MSTA LTR MaLR 0 428 1 892 235 168 33 chr5 179270717 179271176 -20358974 + LTR33A LTR ERVL 1 521 -2 569 187 136 120 chr5 179276685 179276932 -20353218 - L1MC5 LINE L1 -310 7651 7409 2204 98 7 0 chr5 179276932 179277218 -20352932 - AluSx SINE Alu -13 299 12 569 187 136 120 chr5 179277218 179277477 -20352673 - L1MC5 LINE L1 -552 7409 7137 * 26101 41 2 1 chr5 179277461 179281615 -20348535 - L1PA5 LINE L1 0 6154 2000 13329 73 2 9 chr5 179281616 179283471 -20346679 + L1PA5 LINE L1 165 2005 -4141 513 256 68 19 chr5 179283486 179283794 -20346356 - L1MCa LINE L1 -4836 1590 1268 643 213 84 51 chr5 179283811 179284145 -20346005 - L1MCa LINE L1 -5205 1402 1058 360 243 14 0 chr5 179284197 179284267 -20345883 + L2 LINE L2 3194 3264 -49 233 232 0 0 chr5 179284641 179284697 -20345453 - L1ME LINE L1 -446 5675 5620 25 0 0 0 chr5 179285305 179285330 -20344820 + AT_rich Low_complexity Low_complexity 1 25 0 551 200 36 0 chr5 179285420 179285530 -20344620 + MLT1A2 LTR MaLR 1 114 -260 2318 115 8 11 chr5 179285532 179285888 -20344262 - THE1A LTR MaLR 0 355 1 10943 107 2 2 chr5 179285893 179287467 -20342683 - THE1A-int LTR MaLR -6 1574 1 2538 99 8 8 chr5 179287467 179287822 -20342328 - THE1A LTR MaLR 0 355 1 904 230 32 40 chr5 179287822 179288074 -20342076 + MLT1A2 LTR MaLR 112 361 -13 1702 212 98 48 chr5 179288277 179288758 -20341392 - MLT1D LTR MaLR 0 505 1 1040 248 114 56 chr5 179288975 179289199 -20340951 - Charlie7 DNA MER1_type 0 2612 2403 524 29 0 0 chr5 179289199 179289267 -20340883 + L1PA2 LINE L1 6082 6149 -6 1040 248 114 56 chr5 179289267 179290118 -20340032 - Charlie7 DNA MER1_type -209 2403 1474 2440 166 30 0 chr5 179290297 179290762 -20339388 + L1MA4 LINE L1 5821 6299 -1 1023 223 0 0 chr5 179292437 179292625 -20337525 + MER5A DNA MER1_type 2 189 0 372 218 127 18 chr5 179292649 179292759 -20337391 - L2 LINE L2 -5 3308 3187 2264 107 0 10 chr5 179293367 179293675 -20336475 + AluSg SINE Alu 1 305 -5 186 103 0 0 chr5 179293743 179293772 -20336378 + (CA)n Simple_repeat Simple_repeat 2 30 0 390 249 82 68 chr5 179293810 179294223 -20335927 - L1MC4 LINE L1 -197 7845 7317 344 295 140 54 chr5 179294223 179294501 -20335649 - L2 LINE L2 -6 3307 3006 222 62 0 0 chr5 179295838 179295870 -20334280 + (TG)n Simple_repeat Simple_repeat 2 33 0 879 184 5 60 chr5 179295989 179296206 -20333944 + MER3 DNA MER1_type 1 205 -4 535 196 41 0 chr5 179296912 179297009 -20333141 - U6 snRNA snRNA -6 101 1 447 326 88 0 chr5 179297363 179297510 -20332640 - L2 LINE L2 -6 3266 3107 2434 78 0 0 chr5 179297778 179298087 -20332063 - AluY SINE Alu -2 309 1 2643 81 5 24 chr5 179298283 179298666 -20331484 - L1PB1 LINE L1 0 6151 5776 236 203 16 31 chr5 179298666 179298730 -20331420 + (TA)n Simple_repeat Simple_repeat 1 63 0 3522 125 24 28 chr5 179298730 179299578 -20330572 - L1PB1 LINE L1 -360 5791 4945 547 204 36 24 chr5 179300004 179300021 -20330129 - L1MA10 LINE L1 -2 6332 6316 2108 259 116 23 chr5 179300021 179301200 -20328950 - L1ME3 LINE L1 -7 6224 4942 3097 173 76 4 chr5 179301220 179301969 -20328181 - L1MB7 LINE L1 -206 5978 5175 1380 271 89 33 chr5 179301966 179302676 -20327474 - L1ME3 LINE L1 -4308 2088 1420 * 1755 153 11 7 chr5 179302676 179302958 -20327192 - AluJb SINE Alu -11 301 19 1380 271 89 33 chr5 179302958 179303117 -20327033 - L1ME3 LINE L1 -4976 1420 1271 2298 93 0 3 chr5 179303117 179303417 -20326733 - AluY SINE Alu -12 299 1 1380 271 89 33 chr5 179303417 179304326 -20325824 - L1ME3 LINE L1 -5125 1271 60 1926 236 62 43 chr5 179304416 179304980 -20325170 + MLT1E2 LTR MaLR 52 626 0 2103 129 3 0 chr5 179305268 179305570 -20324580 - AluSx SINE Alu -9 303 1 249 361 101 35 chr5 179308002 179308171 -20321979 + L3 LINE CR1 1271 1450 -127 370 293 19 9 chr5 179308477 179308583 -20321567 - MIR SINE MIR -111 151 45 1471 217 64 78 chr5 179308899 179309372 -20320778 + MLT1C LTR MaLR 6 465 -2 22 35 0 0 chr5 179309501 179309530 -20320620 + AT_rich Low_complexity Low_complexity 1 29 0 482 197 159 15 chr5 179310406 179310538 -20319612 - MER20 DNA MER1_type 0 219 69 315 150 0 0 chr5 179310538 179310598 -20319552 + (CA)n Simple_repeat Simple_repeat 2 61 0 424 131 0 0 chr5 179310598 179310659 -20319491 - MER20 DNA MER1_type -158 61 1 270 318 12 12 chr5 179311110 179311195 -20318955 - L2 LINE L2 -1 3312 3228 1308 220 32 0 chr5 179311766 179312079 -20318071 - MER33 DNA MER1_type -1 323 1 465 19 0 0 chr5 179313137 179313191 -20316959 + (TA)n Simple_repeat Simple_repeat 2 55 0 230 191 0 0 chr5 179313370 179313412 -20316738 - L1MC4 LINE L1 -1340 6702 6661 373 222 25 12 chr5 179313673 179313754 -20316396 + L2 LINE L2 3191 3272 0 218 286 18 0 chr5 179314231 179314287 -20315863 - L2 LINE L2 -82 3231 3175 477 0 0 0 chr5 179314548 179314601 -20315549 + (TG)n Simple_repeat Simple_repeat 2 54 0 272 261 63 78 chr5 179315601 179315743 -20314407 + MIR SINE MIR 111 250 -12 2005 118 38 0 chr5 179315910 179316199 -20313951 + AluSx SINE Alu 1 300 -12 343 370 46 50 chr5 179316851 179316912 -20313238 - L2 LINE L2 -4 3268 3208 2150 104 13 3 chr5 179316912 179317210 -20312940 - AluSc SINE Alu -8 301 1 343 370 46 50 chr5 179317210 179317410 -20312740 - L2 LINE L2 -64 3208 3008 609 14 0 0 chr5 179317449 179317519 -20312631 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 184 326 58 0 chr5 179317584 179317670 -20312480 - L2 LINE L2 -661 2653 2563 19403 166 52 8 chr5 179317758 179319569 -20310581 - L1 LINE L1 -1370 6195 4465 2183 105 7 0 chr5 179319569 179319865 -20310285 - AluSg1 SINE Alu -3 306 9 19403 166 52 8 chr5 179319865 179323976 -20306174 - L1 LINE L1 -3100 4465 10 406 238 57 0 chr5 179323981 179324086 -20306064 - MER63 DNA MER1_type -819 111 1 1847 217 41 78 chr5 179324094 179324734 -20305416 - L1ME1 LINE L1 -125 6041 5426 285 311 61 7 chr5 179324791 179324939 -20305211 - L2 LINE L2 -1291 2023 1868 216 179 0 0 chr5 179325373 179325412 -20304738 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 225 211 0 0 chr5 179325483 179325535 -20304615 + (CATATA)n Simple_repeat Simple_repeat 4 55 0 876 275 67 76 chr5 179325536 179326198 -20303952 + L2 LINE L2 2534 3190 -123 240 224 35 17 chr5 179328307 179328365 -20301785 - L1ME3A LINE L1 -77 6093 6035 664 265 39 39 chr5 179328480 179328740 -20301410 - L1ME3A LINE L1 -208 5962 5703 468 282 192 14 chr5 179328759 179329301 -20300849 - L1ME3A LINE L1 -572 5590 4938 * 831 256 89 28 chr5 179329286 179329907 -20300243 - L1ME3A LINE L1 -2696 3450 2768 * 1033 149 12 167 chr5 179329901 179330236 -20299914 - L1MC2 LINE L1 -1 6343 6061 675 219 28 11 chr5 179332625 179332803 -20297347 - L1MC1 LINE L1 -285 6048 5868 258 156 0 0 chr5 179333090 179333135 -20297015 + T-rich Low_complexity Low_complexity 1 45 0 961 164 33 51 chr5 179333224 179333358 -20296792 + MER2 DNA MER2_type 1 131 -214 1309 107 12 103 chr5 179333358 179333611 -20296539 - MER30 DNA MER1_type 0 230 1 961 164 33 51 chr5 179333611 179333690 -20296460 + MER2 DNA MER2_type 131 210 -135 883 221 52 12 chr5 179333857 179334106 -20296044 - MLT1D-int LTR MaLR -1107 264 6 1570 204 98 46 chr5 179334111 179334179 -20295971 - MLT1D LTR MaLR 0 505 442 1913 107 0 11 chr5 179334179 179334440 -20295710 + AluSg SINE Alu 35 292 -18 1570 204 98 46 chr5 179334440 179334851 -20295299 - MLT1D LTR MaLR -63 442 1 375 318 129 20 chr5 179335836 179336037 -20294113 + MIR SINE MIR 2 224 -38 286 352 138 9 chr5 179337002 179337212 -20292938 + MIR SINE MIR 1 237 -25 1948 259 21 16 chr5 179338141 179338708 -20291442 + MER74B LTR ERVL 53 622 0 3493 225 71 15 chr5 179339150 179340342 -20289808 - L1ME1 LINE L1 -6 6160 4847 890 175 32 11 chr5 179340342 179340531 -20289619 + L1MA9 LINE L1 6120 6312 0 3493 225 71 15 chr5 179340531 179341060 -20289090 - L1ME1 LINE L1 -1319 4847 4349 23 33 0 0 chr5 179341204 179341234 -20288916 + AT_rich Low_complexity Low_complexity 1 30 0 1543 253 57 38 chr5 179342689 179342923 -20287227 - MER114 LTR ERV 0 648 420 7615 21 9 0 chr5 179342923 179344026 -20286124 + L1PA3 LINE L1 5039 6153 -2 1815 146 17 26 chr5 179344029 179344331 -20285819 + AluJb SINE Alu 1 299 -13 1543 253 57 38 chr5 179344331 179344728 -20285422 - MER114 LTR ERV -229 419 1 26 0 0 0 chr5 179344785 179344811 -20285339 + AT_rich Low_complexity Low_complexity 1 26 0 230 152 0 0 chr5 179345168 179345201 -20284949 - MER94 DNA DNA -99 35 3 1797 111 11 4 chr5 179345378 179345657 -20284493 + L1PA13 LINE L1 5872 6152 -11 920 229 42 23 chr5 179345833 179346047 -20284103 + MER58A DNA MER1_type 1 218 -6 1940 141 23 13 chr5 179346448 179346754 -20283396 + AluSx SINE Alu 1 309 -3 1417 188 75 30 chr5 179346888 179347225 -20282925 + MLT1A1 LTR MaLR 1 442 -15 246 230 41 36 chr5 179347349 179347509 -20282641 - L1M1 LINE L1 -486 5817 5658 1841 222 65 6 chr5 179347541 179348014 -20282136 - L1M4 LINE L1 -346 5818 5288 2033 141 10 0 chr5 179348014 179348312 -20281838 - AluSq SINE Alu -12 301 1 1841 222 65 6 chr5 179348312 179348664 -20281486 - L1M4 LINE L1 -876 5288 4958 743 237 38 6 chr5 179348921 179349205 -20280945 - MLT1G LTR MaLR -196 359 3 245 302 48 90 chr5 179349247 179349558 -20280592 - MLT1H1-int LTR MaLR -42 1329 1032 388 302 49 37 chr5 179350196 179350441 -20279709 - MLT1H1-int LTR MaLR -830 541 294 1481 290 61 14 chr5 179350550 179351060 -20279090 - MLT1H1 LTR MaLR 0 555 22 16939 99 11 15 chr5 179352012 179354559 -20275591 - L1P LINE L1 -1424 4722 2186 356 194 14 0 chr5 179354557 179354629 -20275521 + L1P LINE L1 4718 4790 -1356 * 7027 54 11 1 chr5 179354634 179356005 -20274145 + L1PA7 LINE L1 4752 6150 -4 1218 186 210 62 chr5 179360057 179360443 -20269707 - LTR47A LTR ERVL 0 452 10 23 0 0 0 chr5 179360817 179360840 -20269310 + AT_rich Low_complexity Low_complexity 1 23 0 2159 131 0 0 chr5 179360944 179361241 -20268909 - AluSq SINE Alu -16 297 1 1398 232 9 114 chr5 179361315 179361859 -20268291 + L1MD3 LINE L1 6619 7143 -899 323 336 61 14 chr5 179362394 179362557 -20267593 - MIR SINE MIR -55 207 40 213 39 0 0 chr5 179362963 179362989 -20267161 + (A)n Simple_repeat Simple_repeat 1 26 0 264 30 0 0 chr5 179363207 179363240 -20266910 + (CA)n Simple_repeat Simple_repeat 1 33 0 223 49 49 0 chr5 179364892 179364933 -20265217 + (TA)n Simple_repeat Simple_repeat 2 44 0 354 250 29 64 chr5 179365093 179365297 -20264853 - HAL1 LINE L1 -5 2502 2306 551 167 29 0 chr5 179365932 179366034 -20264116 - MER103 DNA DNA 0 166 62 464 276 18 9 chr5 179366914 179367045 -20263105 + MIR SINE MIR 59 187 -60 439 298 37 84 chr5 179367189 179367380 -20262770 - MIR SINE MIR -62 146 7 278 309 41 24 chr5 179369334 179369457 -20260693 + MER5A DNA MER1_type 7 131 -58 916 166 17 11 chr5 179369650 179369825 -20260325 - L1MB1 LINE L1 0 6168 5993 293 246 0 0 chr5 179370542 179370607 -20259543 + GA-rich Low_complexity Low_complexity 5 69 0 388 337 67 6 chr5 179373223 179373401 -20256749 - MIR SINE MIR -6 256 68 7106 57 6 0 chr5 179373435 179375048 -20255102 + L1PA6 LINE L1 4536 6154 0 204 40 0 0 chr5 179375921 179375946 -20254204 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1107 160 0 37 chr5 179375946 179376134 -20254016 - AluSg/x SINE Alu -32 280 100 1723 148 40 33 chr5 179376142 179376446 -20253704 - AluJo SINE Alu -6 306 1 556 293 133 11 chr5 179376448 179376636 -20253514 + L2 LINE L2 2849 3059 -254 728 244 72 42 chr5 179376636 179376746 -20253404 - MLT1H1 LTR MaLR 0 555 450 1920 106 32 32 chr5 179376746 179377030 -20253120 - AluSx SINE Alu -18 294 11 728 244 72 42 chr5 179377030 179377181 -20252969 - MLT1H1 LTR MaLR -105 450 286 1414 222 65 119 chr5 179377187 179377760 -20252390 - MLT1F1 LTR MaLR 0 567 1 902 241 123 32 chr5 179377772 179378025 -20252125 - MLT1H1 LTR MaLR -279 276 1 378 261 15 60 chr5 179378117 179378251 -20251899 + L2 LINE L2 3171 3298 -15 536 292 38 14 chr5 179378532 179378741 -20251409 + L2 LINE L2 3095 3308 -5 260 211 13 0 chr5 179380112 179380188 -20249962 + (TA)n Simple_repeat Simple_repeat 1 77 0 216 0 0 0 chr5 179380600 179380624 -20249526 + (T)n Simple_repeat Simple_repeat 1 24 0 195 250 19 0 chr5 179381161 179381213 -20248937 + L2 LINE L2 3261 3313 0 320 259 98 0 chr5 179381376 179381488 -20248662 - MIR SINE MIR -76 186 64 252 309 10 10 chr5 179382020 179382117 -20248033 - MIR SINE MIR -5 257 161 376 309 166 32 chr5 179382299 179382642 -20247508 + L1ME3A LINE L1 1707 2095 -4445 32 57 0 0 chr5 179382659 179382712 -20247438 + AT_rich Low_complexity Low_complexity 1 53 0 1221 281 110 26 chr5 179382811 179383873 -20246277 + L1ME3A LINE L1 2373 3484 -3056 1841 266 114 26 chr5 179383887 179385051 -20245099 + L1ME3A LINE L1 4844 6182 -382 1608 127 106 68 chr5 179385051 179385373 -20244777 - MER1B DNA MER1_type 0 337 4 1841 266 114 26 chr5 179385373 179385792 -20244358 + L1ME3A LINE L1 6182 6563 -1 21 89 0 0 chr5 179387221 179387277 -20242873 + AT_rich Low_complexity Low_complexity 1 56 0 2300 92 0 0 chr5 179387281 179387576 -20242574 - AluSc SINE Alu -14 295 1 180 0 0 0 chr5 179389155 179389175 -20240975 + (TTA)n Simple_repeat Simple_repeat 2 21 0 3188 146 114 5 chr5 179389316 179389921 -20240229 + LTR51 LTR ERV1 1 671 0 252 235 111 74 chr5 179391507 179391588 -20238562 - L2 LINE L2 -21 3251 3168 234 91 0 0 chr5 179391620 179391653 -20238497 + (T)n Simple_repeat Simple_repeat 1 33 0 1877 158 0 3 chr5 179391939 179392230 -20237920 - AluSx SINE Alu -20 292 3 378 306 0 19 chr5 179393712 179393820 -20236330 + MER5A DNA MER1_type 2 107 -82 3014 145 48 12 chr5 179393822 179394407 -20235743 + MER4B LTR ERV1 9 779 0 181 139 139 0 chr5 179394407 179394443 -20235707 + MER5A DNA MER1_type 93 133 -56 2756 202 24 7 chr5 179395379 179395919 -20234231 - MER44D DNA MER2_type 0 605 2 1320 213 62 26 chr5 179396508 179396860 -20233290 - MLT1A1 LTR MaLR 0 365 1 285 29 0 0 chr5 179397536 179397570 -20232580 + (TG)n Simple_repeat Simple_repeat 2 35 0 338 324 101 53 chr5 179398229 179398584 -20231566 + MLT1K LTR MaLR 196 567 -21 12581 136 57 6 chr5 179398921 179401006 -20229144 + Tigger1 DNA MER2_type 1 2191 -227 3535 235 49 67 chr5 179401010 179401396 -20228754 + L1MCa LINE L1 768 1160 -5266 1847 138 11 11 chr5 179401396 179401700 -20228450 + AluSq SINE Alu 1 304 0 3535 235 49 67 chr5 179401700 179402982 -20227168 + L1MCa LINE L1 1160 2517 -3909 2232 70 52 3 chr5 179402982 179403269 -20226881 + AluSp SINE Alu 1 301 -12 3535 235 49 67 chr5 179403269 179403633 -20226517 + L1MCa LINE L1 2517 2886 -3540 2893 201 45 16 chr5 179403610 179404295 -20225855 + L1 LINE L1 4556 5260 -1166 * 292 98 0 39 chr5 179404291 179404342 -20225808 - L1PA4 LINE L1 -92 6063 6015 * 2967 26 0 0 chr5 179404340 179404683 -20225467 + L1PA4 LINE L1 5685 6027 -128 233 250 0 15 chr5 179404686 179404754 -20225396 + MLT1K LTR MaLR 518 584 -4 902 226 123 57 chr5 179405571 179405978 -20224172 + MLT1C LTR MaLR 34 467 0 22 0 0 0 chr5 179405991 179406013 -20224137 + AT_rich Low_complexity Low_complexity 1 22 0 563 140 49 12 chr5 179406031 179406195 -20223955 + (TA)n Simple_repeat Simple_repeat 1 170 0 444 372 82 21 chr5 179406534 179406800 -20223350 + L2 LINE L2 2763 3047 -266 1423 211 25 74 chr5 179406800 179407193 -20222957 + MLT1A2 LTR MaLR 1 374 0 444 372 82 21 chr5 179407193 179407228 -20222922 + L2 LINE L2 3047 3078 -235 625 253 81 106 chr5 179407234 179407615 -20222535 - MLT1H LTR MaLR -8 541 173 2671 110 0 0 chr5 179407615 179407979 -20222171 - THE1B LTR MaLR 0 364 1 625 253 81 106 chr5 179407979 179408068 -20222082 - MLT1H LTR MaLR -376 173 83 5587 134 11 10 chr5 179408292 179409196 -20220954 - L1PA13 LINE L1 -5 6158 5254 781 298 45 72 chr5 179410355 179410838 -20219312 - MLT1H LTR MaLR 0 549 80 436 265 59 7 chr5 179410890 179411026 -20219124 - MER58C DNA MER1_type -8 207 65 271 200 114 14 chr5 179411149 179411219 -20218931 + L2 LINE L2 3194 3270 -2 275 295 101 16 chr5 179411238 179411367 -20218783 - MLT1K LTR MaLR -149 439 300 942 104 0 0 chr5 179411629 179411754 -20218396 + AluSq/x SINE Alu 1 125 -188 225 0 0 0 chr5 179411775 179411800 -20218350 + (T)n Simple_repeat Simple_repeat 1 25 0 207 349 30 0 chr5 179414135 179414201 -20215949 + MIR3 SINE MIR 87 154 -54 254 309 118 9 chr5 179414204 179414314 -20215836 + Charlie8 DNA MER1_type 3 124 -2293 268 318 56 9 chr5 179414525 179414632 -20215518 + Charlie8 DNA MER1_type 173 284 -2133 252 324 0 0 chr5 179414764 179414838 -20215312 + Charlie8 DNA MER1_type 2341 2414 -3 252 200 0 0 chr5 179415408 179415463 -20214687 + (TA)n Simple_repeat Simple_repeat 2 56 0 190 160 0 60 chr5 179415605 179415655 -20214495 + MIR SINE MIR 104 150 -112 3821 152 42 37 chr5 179416035 179416816 -20213334 - LTR1 LTR ERV1 0 785 1 385 253 36 42 chr5 179417738 179417904 -20212246 + LTR43 LTR ERV1 180 344 -258 270 235 122 10 chr5 179418089 179418187 -20211963 - MER103 DNA DNA -46 120 12 246 304 49 0 chr5 179419718 179419820 -20210330 - MIR SINE MIR 0 262 156 681 261 65 22 chr5 179419823 179420053 -20210097 + MLT1J LTR MaLR 2 241 -270 1041 295 170 16 chr5 179420064 179420189 -20209961 - MLT1H LTR MaLR -20 529 425 2451 132 3 13 chr5 179420189 179420568 -20209582 + THE1C LTR MaLR 1 375 0 9756 113 47 36 chr5 179420568 179422130 -20208020 + THE1C-int LTR MaLR 1 1580 0 2627 106 3 5 chr5 179422130 179422506 -20207644 + THE1C LTR MaLR 1 375 0 1041 295 170 16 chr5 179422506 179422826 -20207324 - MLT1H LTR MaLR -123 426 13 258 346 84 9 chr5 179422835 179422942 -20207208 + MLT1J LTR MaLR 228 342 -169 242 100 0 0 chr5 179422994 179423034 -20207116 + MLT1J LTR MaLR 428 467 -44 416 305 18 37 chr5 179423046 179423210 -20206940 - MIR SINE MIR -84 178 18 2951 232 48 21 chr5 179425263 179426555 -20203595 + L1ME1 LINE L1 4841 6165 -1 279 0 0 0 chr5 179426883 179426914 -20203236 + (CA)n Simple_repeat Simple_repeat 2 32 0 322 340 110 48 chr5 179426931 179427349 -20202801 + L2 LINE L2 2829 3272 0 2388 143 73 0 chr5 179428672 179429071 -20201079 - MSTA LTR MaLR 0 428 1 590 256 139 41 chr5 179430288 179430554 -20199596 + MLT1D LTR MaLR 1 292 -213 209 353 49 0 chr5 179430870 179430972 -20199178 - MIR SINE MIR -135 127 21 387 0 0 0 chr5 179431261 179431304 -20198846 + (TA)n Simple_repeat Simple_repeat 2 44 0 2233 144 2 45 chr5 179431338 179431760 -20198390 - L1MA9 LINE L1 -158 6154 5751 203 384 0 0 chr5 179431984 179432057 -20198093 - MIR SINE MIR -143 119 47 249 108 0 0 chr5 179432263 179432300 -20197850 + (TA)n Simple_repeat Simple_repeat 1 37 0 2637 145 5 16 chr5 179432302 179432737 -20197413 + Tigger2a DNA MER2_type 5 434 0 222 222 0 0 chr5 179432737 179432791 -20197359 + (TATG)n Simple_repeat Simple_repeat 3 56 0 2911 190 17 18 chr5 179432841 179433495 -20196655 - L1MB8 LINE L1 0 6178 5526 2136 111 40 3 chr5 179434106 179434346 -20195804 + AluSx SINE Alu 2 257 -55 243 0 0 0 chr5 179434346 179434373 -20195777 + (CACTG)n Simple_repeat Simple_repeat 1 27 0 2136 111 40 3 chr5 179434373 179434430 -20195720 + AluSx SINE Alu 257 310 -2 294 29 0 0 chr5 179435662 179435697 -20194453 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2167 143 74 13 chr5 179435760 179436139 -20194011 - LTR1B LTR ERV1 0 826 425 193 71 0 48 chr5 179436148 179436190 -20193960 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 5523 37 0 0 chr5 179436190 179436846 -20193304 - L1PA4 LINE L1 -24 6131 5476 2572 157 21 11 chr5 179436846 179437280 -20192870 - LTR1B LTR ERV1 -388 438 1 364 259 69 46 chr5 179437632 179437763 -20192387 + MER94 DNA DNA 1 134 0 539 271 106 65 chr5 179437815 179437895 -20192255 + L1ME3 LINE L1 5729 5804 -358 419 200 0 0 chr5 179437895 179437975 -20192175 - MADE1 DNA Mariner 0 80 1 539 271 106 65 chr5 179437975 179438223 -20191927 + L1ME3 LINE L1 5804 6075 -87 427 346 0 0 chr5 179439948 179440075 -20190075 + L3 LINE CR1 1431 1557 -20 219 69 0 0 chr5 179440853 179440882 -20189268 + (GA)n Simple_repeat Simple_repeat 2 30 0 1282 141 65 141 chr5 179441123 179441505 -20188645 + THE1C LTR MaLR 23 375 0 311 223 88 68 chr5 179441759 179441907 -20188243 - Charlie8 DNA MER1_type -2213 204 54 4519 236 66 47 chr5 179441970 179442355 -20187795 + Cheshire DNA MER1_type 27 403 -2017 1897 199 90 31 chr5 179442355 179442832 -20187318 + MLT1D LTR MaLR 1 505 0 4519 236 66 47 chr5 179442832 179443947 -20186203 + Cheshire DNA MER1_type 403 1555 -865 23354 148 13 79 chr5 179443955 179448945 -20181205 + L1PA8 LINE L1 5 4667 -1479 6234 91 1 0 chr5 179448945 179449789 -20180361 + L1PA8 LINE L1 5318 6167 -5 528 187 0 0 chr5 179449791 179449898 -20180252 + Cheshire DNA MER1_type 1552 1658 -762 2736 187 51 67 chr5 179449928 179450011 -20180139 + Cheshire DNA MER1_type 1648 1731 -689 1349 212 14 38 chr5 179450011 179450299 -20179851 + AluJb SINE Alu 1 281 -31 2736 187 51 67 chr5 179450299 179450844 -20179306 + Cheshire DNA MER1_type 1731 2265 -155 2217 119 0 10 chr5 179450844 179451155 -20178995 - AluSx SINE Alu -4 308 1 2736 187 51 67 chr5 179451155 179451272 -20178878 + Cheshire DNA MER1_type 2265 2382 -38 12622 131 25 11 chr5 179451273 179451789 -20178361 + Tigger1 DNA MER2_type 2 509 -1909 1320 94 0 38 chr5 179451789 179452001 -20178149 + L1MA3 LINE L1 6102 6305 0 12622 131 25 11 chr5 179452001 179453489 -20176661 + Tigger1 DNA MER2_type 509 2034 -384 504 206 10 0 chr5 179453524 179453621 -20176529 + LTR16C LTR ERVL 367 464 -27 2255 248 14 0 chr5 179453691 179454280 -20175870 + L1 LINE L1 4359 4955 -1191 610 143 0 48 chr5 179454288 179454414 -20175736 - L1M LINE L1 -772 5408 5289 1136 183 29 73 chr5 179454414 179454687 -20175463 - AluJo SINE Alu -26 286 26 321 291 5 28 chr5 179454851 179455002 -20175148 + AluJ/FRAM SINE Alu 214 302 0 25 31 0 0 chr5 179457116 179457148 -20173002 + AT_rich Low_complexity Low_complexity 1 32 0 258 132 0 0 chr5 179457388 179457441 -20172709 + (A)n Simple_repeat Simple_repeat 1 53 0 21 0 0 0 chr5 179460522 179460543 -20169607 + AT_rich Low_complexity Low_complexity 1 21 0 504 184 0 0 chr5 179460990 179461093 -20169057 + (TG)n Simple_repeat Simple_repeat 2 104 0 385 302 22 0 chr5 179462972 179463111 -20167039 + MIR SINE MIR 35 176 -86 2086 102 65 7 chr5 179463492 179463786 -20166364 - AluSp SINE Alu 0 313 3 977 241 32 4 chr5 179463805 179464054 -20166096 - L1MB5 LINE L1 -160 6014 5759 676 307 35 28 chr5 179464086 179464373 -20165777 + L2 LINE L2 3015 3303 -10 32 0 0 0 chr5 179464559 179464591 -20165559 + AT_rich Low_complexity Low_complexity 1 32 0 418 316 46 51 chr5 179465265 179465461 -20164689 - MIR SINE MIR -34 228 34 465 241 74 19 chr5 179465462 179465624 -20164526 - L1MC4 LINE L1 -72 7970 7800 284 279 60 40 chr5 179465682 179466194 -20163956 - L1MC4 LINE L1 -413 7629 7163 404 123 55 0 chr5 179466221 179466294 -20163856 + MADE1 DNA Mariner 1 77 -3 1740 171 44 34 chr5 179466804 179466964 -20163186 + MLT1B LTR MaLR 1 158 -232 2365 75 0 3 chr5 179466964 179467259 -20162891 + AluSg SINE Alu 1 294 -16 1740 171 44 34 chr5 179467259 179467483 -20162667 + MLT1B LTR MaLR 158 389 -1 330 283 181 35 chr5 179467944 179468397 -20161753 - L1MEd LINE L1 -4943 1176 658 255 317 153 37 chr5 179468402 179468670 -20161480 - L1MEd LINE L1 -5492 627 329 512 206 52 0 chr5 179468694 179468849 -20161301 - L1M4 LINE L1 -986 5160 4998 291 283 72 72 chr5 179468834 179469071 -20161079 - L1MEd LINE L1 -5837 282 46 * 453 254 15 33 chr5 179469345 179469511 -20160639 + MER63 DNA MER1_type 677 1060 0 276 200 43 29 chr5 179469663 179469733 -20160417 - MER58 DNA MER1_type -15 2405 130 235 205 39 0 chr5 179469743 179469821 -20160329 + CT-rich Low_complexity Low_complexity 1 81 0 286 233 221 0 chr5 179469821 179469907 -20160243 - MER58 DNA MER1_type -236 105 1 224 136 51 34 chr5 179471311 179471370 -20158780 + T-rich Low_complexity Low_complexity 6 65 0 223 195 0 0 chr5 179472378 179472419 -20157731 + A-rich Low_complexity Low_complexity 1 41 0 381 328 33 24 chr5 179472903 179473118 -20157032 - MIR SINE MIR -8 254 37 904 261 57 92 chr5 179473262 179473752 -20156398 - MLT1G LTR MaLR -7 583 111 230 158 0 102 chr5 179474232 179474477 -20155673 + AluJo SINE Alu 1 290 -12 208 133 53 13 chr5 179474503 179474578 -20155572 + (TA)n Simple_repeat Simple_repeat 2 79 0 29 70 0 0 chr5 179474590 179474647 -20155503 + AT_rich Low_complexity Low_complexity 1 57 0 2543 110 25 11 chr5 179475965 179476403 -20153747 - L1MA4A LINE L1 -625 5678 5234 2939 139 7 3 chr5 179476405 179476957 -20153193 + L1MA4A LINE L1 5694 6298 -5 2804 6 0 19 chr5 179477043 179477359 -20152791 + AluYa5 SINE Alu 1 310 -1 279 0 0 0 chr5 179477580 179477611 -20152539 + (CA)n Simple_repeat Simple_repeat 2 32 0 2829 76 13 20 chr5 179477620 179478017 -20152133 - L1PA7 LINE L1 -14 6140 5747 270 217 54 22 chr5 179479383 179479475 -20150675 - MER103 DNA DNA -2 164 70 27 81 0 0 chr5 179479481 179479543 -20150607 + AT_rich Low_complexity Low_complexity 1 62 0 183 129 0 0 chr5 179479648 179479679 -20150471 + (GA)n Simple_repeat Simple_repeat 1 31 0 380 215 124 29 chr5 179479844 179479967 -20150183 - MIR SINE MIR -42 166 31 828 223 30 15 chr5 179480858 179481123 -20149027 + MER33 DNA MER1_type 56 324 0 25 51 0 0 chr5 179481128 179481167 -20148983 + AT_rich Low_complexity Low_complexity 1 39 0 2108 112 0 30 chr5 179481422 179481726 -20148424 + AluSq SINE Alu 1 295 -18 365 235 52 0 chr5 179481744 179481859 -20148291 + L1M4 LINE L1 1309 1429 -5113 2172 126 12 3 chr5 179481965 179482299 -20147851 - L1PA15 LINE L1 -65 6100 5764 1633 121 26 15 chr5 179482295 179482567 -20147583 + L1PA15 LINE L1 5482 5756 -409 * 211 130 43 33 chr5 179482763 179482855 -20147295 + (TTATA)n Simple_repeat Simple_repeat 1 93 0 234 0 0 0 chr5 179482949 179482975 -20147175 + (TG)n Simple_repeat Simple_repeat 2 27 0 2444 66 0 7 chr5 179483204 179483507 -20146643 - AluY SINE Alu -10 301 1 1308 148 29 4 chr5 179483509 179483752 -20146398 + MER6 DNA MER2_type 617 865 0 577 231 67 39 chr5 179483755 179483963 -20146187 - L1MC/D LINE L1 -2075 5733 5520 1793 92 8 0 chr5 179484096 179484335 -20145815 - AluSp SINE Alu -72 241 1 249 159 0 0 chr5 179485581 179485625 -20144525 + A-rich Low_complexity Low_complexity 1 44 0 25 31 0 0 chr5 179486390 179486422 -20143728 + AT_rich Low_complexity Low_complexity 1 32 0 220 290 14 0 chr5 179486595 179486664 -20143486 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 366 80 0 0 chr5 179486694 179486744 -20143406 + (T)n Simple_repeat Simple_repeat 1 50 0 234 250 47 0 chr5 179486869 179486933 -20143217 + GA-rich Low_complexity Low_complexity 3 69 0 747 279 126 54 chr5 179487097 179487711 -20142439 - L2 LINE L2 -35 3278 2624 198 103 0 0 chr5 179488377 179488406 -20141744 + (T)n Simple_repeat Simple_repeat 1 29 0 1803 160 25 44 chr5 179489119 179489481 -20140669 + THE1A LTR MaLR 1 355 0 10264 94 11 95 chr5 179489483 179491205 -20138945 + THE1A-int LTR MaLR 3 1580 0 2138 132 26 9 chr5 179491205 179491554 -20138596 + THE1A LTR MaLR 1 355 0 206 203 0 16 chr5 179491637 179491701 -20138449 + (TA)n Simple_repeat Simple_repeat 2 64 0 1635 175 58 32 chr5 179493146 179493494 -20136656 + MLT1A1 LTR MaLR 9 365 0 2520 94 0 0 chr5 179493705 179494057 -20136093 - L1P LINE L1 -966 5180 4829 3133 161 51 6 chr5 179494211 179494732 -20135418 - L1PA15 LINE L1 -320 5845 5349 183 100 0 0 chr5 179494732 179494762 -20135388 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3133 161 51 6 chr5 179494762 179495202 -20134948 - L1PA15 LINE L1 -816 5349 4840 378 314 86 16 chr5 179495217 179495657 -20134493 - L1MEd LINE L1 -3379 2750 2280 859 179 7 0 chr5 179495717 179495868 -20134282 - MLT2B2 LTR ERVL -363 152 1 302 263 75 102 chr5 179495984 179496239 -20133911 - L1MEd LINE L1 -5260 859 612 846 167 44 106 chr5 179497273 179497500 -20132650 - MER20 DNA MER1_type -3 216 4 252 122 0 0 chr5 179497565 179497606 -20132544 + (A)n Simple_repeat Simple_repeat 1 41 0 180 366 0 0 chr5 179497765 179497836 -20132314 - L2 LINE L2 0 3272 3202 701 250 28 11 chr5 179497893 179498073 -20132077 + MIR SINE MIR 9 191 -71 26 82 0 0 chr5 179498237 179498298 -20131852 + AT_rich Low_complexity Low_complexity 1 61 0 2334 105 0 0 chr5 179498341 179498647 -20131503 + AluSx SINE Alu 1 306 -6 237 185 0 0 chr5 179499208 179499262 -20130888 + L1MC4 LINE L1 6650 6703 -1339 505 197 17 22 chr5 179499265 179499443 -20130707 + (TATG)n Simple_repeat Simple_repeat 2 178 0 359 349 94 23 chr5 179500403 179500873 -20129277 + HAL1b LINE L1 93 595 -753 597 257 49 31 chr5 179500922 179501148 -20129002 + HAL1b LINE L1 666 895 -453 22 56 0 0 chr5 179501314 179501350 -20128800 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr5 179502036 179502071 -20128079 + AT_rich Low_complexity Low_complexity 1 35 0 331 232 83 60 chr5 179502095 179502263 -20127887 + L1M4 LINE L1 2788 2959 -3187 393 22 0 0 chr5 179502868 179502914 -20127236 + (CA)n Simple_repeat Simple_repeat 2 47 0 352 234 0 13 chr5 179503149 179503226 -20126924 - MER94 DNA DNA -15 119 44 365 306 21 35 chr5 179503343 179503487 -20126663 - MER117 DNA MER1_type -4 193 52 975 258 11 8 chr5 179503831 179504099 -20126051 - AluSx SINE Alu -16 296 28 312 323 146 15 chr5 179504226 179504486 -20125664 - HAL1 LINE L1 -443 2064 1771 2259 289 124 45 chr5 179504574 179506090 -20124060 - HAL1 LINE L1 -860 1647 13 850 222 6 6 chr5 179507614 179507790 -20122360 - MER5B DNA MER1_type 0 178 3 378 259 177 43 chr5 179507798 179508030 -20122120 + L3 LINE CR1 1176 1438 -139 511 274 192 5 chr5 179508146 179508354 -20121796 - MIR SINE MIR 0 262 16 1199 244 27 12 chr5 179509466 179509794 -20120356 - MER58B DNA MER1_type -7 334 2 288 291 173 0 chr5 179510008 179510118 -20120032 + MIR SINE MIR 29 157 -105 724 324 24 4 chr5 179510199 179510446 -20119704 - MIR SINE MIR 0 262 11 363 322 83 29 chr5 179510564 179510769 -20119381 + MIR SINE MIR 19 234 -28 21 0 0 0 chr5 179510872 179510893 -20119257 + AT_rich Low_complexity Low_complexity 1 21 0 426 306 81 12 chr5 179511447 179511620 -20118530 - MIR3 SINE MIR -8 200 16 2099 93 3 28 chr5 179512044 179512366 -20117784 + AluSp SINE Alu 1 315 0 216 265 12 24 chr5 179515150 179515233 -20114917 + MIR SINE MIR 143 224 -38 1014 102 0 0 chr5 179515678 179515805 -20114345 + AluSq/x SINE Alu 3 129 -183 183 323 32 0 chr5 179515955 179516017 -20114133 - L2 LINE L2 -399 2915 2852 773 194 36 22 chr5 179517444 179517666 -20112484 + L1MB4 LINE L1 5956 6180 0 356 155 24 0 chr5 179517678 179517762 -20112388 + L1MB8 LINE L1 6093 6178 0 957 269 96 30 chr5 179517768 179518206 -20111944 - MLT1C LTR MaLR 0 467 1 532 301 49 16 chr5 179518210 179518393 -20111757 - MIR SINE MIR -8 254 66 455 316 108 26 chr5 179519803 179520034 -20110116 - MIR SINE MIR 0 262 13 201 350 41 21 chr5 179520850 179520947 -20109203 + L2 LINE L2 3215 3313 0 422 296 72 0 chr5 179520979 179521131 -20109019 + MIR SINE MIR 48 210 -52 1853 154 13 10 chr5 179521154 179521453 -20108697 - AluJb SINE Alu -12 300 1 989 223 10 15 chr5 179521959 179522161 -20107989 - MER20 DNA MER1_type 0 219 19 231 140 0 20 chr5 179523572 179523622 -20106528 + (TA)n Simple_repeat Simple_repeat 2 50 0 204 67 0 0 chr5 179524635 179524665 -20105485 + (TG)n Simple_repeat Simple_repeat 2 31 0 339 306 8 41 chr5 179524759 179524880 -20105270 - MIR SINE MIR -44 218 102 22 56 0 0 chr5 179524882 179524918 -20105232 + AT_rich Low_complexity Low_complexity 1 36 0 473 207 121 21 chr5 179524935 179525075 -20105075 - MIR SINE MIR -28 234 81 202 229 0 0 chr5 179525206 179525254 -20104896 + A-rich Low_complexity Low_complexity 1 48 0 2244 113 0 0 chr5 179525932 179526233 -20103917 + AluSq SINE Alu 1 301 -12 25 75 0 0 chr5 179526452 179526505 -20103645 + AT_rich Low_complexity Low_complexity 1 53 0 1742 132 120 20 chr5 179526842 179527183 -20102967 + THE1C LTR MaLR 1 375 0 2005 237 45 30 chr5 179527511 179528047 -20102103 + MER77 LTR ERV1 56 599 -6 320 306 73 6 chr5 179528113 179528223 -20101927 + MIR SINE MIR 63 175 -82 905 229 48 0 chr5 179528228 179528459 -20101691 - MER96B DNA MER1_type? -174 243 2 1815 175 13 3 chr5 179528845 179529154 -20100996 - AluJo SINE Alu 0 312 1 452 305 231 48 chr5 179531065 179531891 -20098259 + L2 LINE L2 1911 2887 -427 285 359 96 19 chr5 179532012 179532221 -20097929 + MIR SINE MIR 2 226 -36 1950 136 149 16 chr5 179532250 179532626 -20097524 + MSTA LTR MaLR 1 426 -2 9462 148 6 43 chr5 179532630 179534269 -20095881 + MSTA-int LTR MaLR 3 1580 0 1625 138 176 37 chr5 179534269 179534645 -20095505 + MSTA LTR MaLR 1 428 0 22 35 0 0 chr5 179534673 179534702 -20095448 + AT_rich Low_complexity Low_complexity 1 29 0 183 184 0 0 chr5 179536166 179536204 -20093946 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr5 179538510 179538533 -20091617 + AT_rich Low_complexity Low_complexity 1 23 0 307 309 103 16 chr5 179538752 179539131 -20091019 + L1MC/D LINE L1 4061 4472 -1674 1064 263 19 34 chr5 179539253 179539573 -20090577 + L1MDa LINE L1 34 348 -6192 1603 182 32 38 chr5 179539671 179539984 -20090166 + AluJo SINE Alu 2 312 0 236 100 25 0 chr5 179539986 179540026 -20090124 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 364 330 35 0 chr5 179540033 179540148 -20090002 + L1MC/D LINE L1 5521 5639 -2169 345 203 0 0 chr5 179540205 179540264 -20089886 + MLT2B2 LTR ERVL 1 59 -456 587 235 45 56 chr5 179540434 179540613 -20089537 + MER8 DNA MER2_type 1 177 -62 391 190 0 13 chr5 179540646 179540725 -20089425 - Tigger2a DNA MER2_type -356 78 1 1028 257 56 34 chr5 179540761 179541364 -20088786 + L1MDa LINE L1 891 1548 -4982 36 40 0 0 chr5 179541387 179541437 -20088713 + AT_rich Low_complexity Low_complexity 1 50 0 2464 71 3 0 chr5 179541532 179541842 -20088308 + AluY SINE Alu 1 311 0 770 277 73 57 chr5 179541872 179542758 -20087392 + L1MDa LINE L1 1740 2687 -4034 381 324 88 60 chr5 179544574 179544674 -20085476 + L2 LINE L2 2866 2962 -351 2429 72 0 10 chr5 179544674 179544978 -20085172 - AluY SINE Alu -10 301 1 381 324 88 60 chr5 179544978 179545309 -20084841 + L2 LINE L2 2962 3309 -4 911 264 49 40 chr5 179545422 179545827 -20084323 - MLT1I LTR MaLR 0 409 1 201 400 17 9 chr5 179546389 179546504 -20083646 - MIR SINE MIR -146 116 1 396 0 0 0 chr5 179546998 179547042 -20083108 + (TG)n Simple_repeat Simple_repeat 2 45 0 206 250 0 0 chr5 179547044 179547096 -20083054 + (TA)n Simple_repeat Simple_repeat 1 52 0 1441 122 0 0 chr5 179547442 179547647 -20082503 + AluSq SINE Alu 84 288 -25 218 281 61 0 chr5 179547648 179547730 -20082420 - MIR SINE MIR 0 262 176 2207 163 29 19 chr5 179547803 179548220 -20081930 - MER61C LTR ERV1 0 434 14 264 220 0 0 chr5 179548187 179548237 -20081913 - LTR28 LTR ERV1 -958 62 13 * 856 196 86 144 chr5 179548228 179548625 -20081525 - MLT1A2 LTR MaLR -16 374 1 353 303 18 0 chr5 179548625 179548734 -20081416 - MIR SINE MIR -92 170 60 6615 78 5 0 chr5 179549110 179550062 -20080088 - L1PA7 LINE L1 0 6154 5200 7901 95 9 10 chr5 179550062 179551198 -20078952 + L1P LINE L1 3468 4602 -1544 1237 225 128 94 chr5 179551478 179552033 -20078117 - MLT1E1 LTR MaLR -28 626 53 837 279 140 39 chr5 179552059 179552620 -20077530 - L2 LINE L2 -255 3058 2447 1702 226 33 9 chr5 179552724 179553149 -20077001 - L1MC3 LINE L1 0 7785 7351 1127 206 59 15 chr5 179553231 179553503 -20076647 - L1MC3 LINE L1 -809 6976 6693 234 259 88 47 chr5 179553510 179553680 -20076470 + L1MC/D LINE L1 5709 5885 -1923 30 0 0 0 chr5 179555268 179555298 -20074852 + AT_rich Low_complexity Low_complexity 1 30 0 508 247 82 74 chr5 179555886 179556129 -20074021 + MIR SINE MIR 13 257 -5 2271 157 70 12 chr5 179556182 179556584 -20073566 - MSTB LTR MaLR 0 426 2 561 219 93 13 chr5 179557035 179557186 -20072964 - MLT1A1 LTR MaLR -202 163 1 1639 196 0 7 chr5 179557419 179557710 -20072440 - AluJo SINE Alu -23 289 1 210 254 0 0 chr5 179557793 179557860 -20072290 + (TA)n Simple_repeat Simple_repeat 2 68 0 27 0 0 0 chr5 179557922 179557949 -20072201 + AT_rich Low_complexity Low_complexity 1 27 0 2303 97 3 0 chr5 179558102 179558400 -20071750 - AluSx SINE Alu -12 300 2 579 289 16 31 chr5 179558936 179559176 -20070974 + MLT1K LTR MaLR 1 242 -307 2368 78 0 13 chr5 179559243 179559551 -20070599 + AluY SINE Alu 1 304 -7 2340 89 0 0 chr5 179560317 179560620 -20069530 - AluSq SINE Alu -10 303 1 2164 118 3 0 chr5 179560871 179561167 -20068983 + AluSq SINE Alu 2 298 -15 627 252 74 57 chr5 179562015 179562313 -20067837 + MLT1K LTR MaLR 267 569 -19 504 88 14 6 chr5 179562865 179562947 -20067203 + THE1C LTR MaLR 305 374 -1 433 232 67 73 chr5 179564252 179564416 -20065734 - MLT1J2 LTR MaLR -287 163 1 2237 154 22 0 chr5 179564956 179565312 -20064838 - THE1B LTR MaLR 0 364 1 24 32 0 0 chr5 179565977 179566008 -20064142 + AT_rich Low_complexity Low_complexity 1 31 0 315 271 0 0 chr5 179566222 179566292 -20063858 - AluJ/FRAM SINE Alu -12 290 221 25 65 0 0 chr5 179566913 179566959 -20063191 + AT_rich Low_complexity Low_complexity 1 46 0 1889 228 31 74 chr5 179567791 179568370 -20061780 - MLT2B3 LTR ERVL 0 554 1 21 0 0 0 chr5 179568545 179568566 -20061584 + AT_rich Low_complexity Low_complexity 1 21 0 562 366 57 4 chr5 179568999 179569226 -20060924 - MIR SINE MIR -18 244 6 217 254 17 0 chr5 179569418 179569477 -20060673 - MIR SINE MIR -6 256 197 201 259 185 0 chr5 179569544 179569625 -20060525 - L2 LINE L2 -499 2815 2720 1772 117 133 13 chr5 179570469 179570769 -20059381 + MER1B DNA MER1_type 2 337 0 581 272 86 0 chr5 179571223 179571385 -20058765 + MIR SINE MIR 63 238 -24 355 281 0 0 chr5 179571966 179572055 -20058095 + MER103 DNA DNA 11 99 -67 198 254 0 79 chr5 179572933 179572996 -20057154 - MIR SINE MIR -6 256 199 2167 105 0 0 chr5 179573035 179573341 -20056809 - L1PA14 LINE L1 -4 6157 5852 240 350 21 0 chr5 179573382 179573479 -20056671 - MIR SINE MIR -161 101 3 2845 0 0 19 chr5 179573973 179574290 -20055860 + AluYa5 SINE Alu 1 311 0 378 42 0 0 chr5 179575041 179575089 -20055061 + (TC)n Simple_repeat Simple_repeat 1 48 0 1814 163 43 38 chr5 179575124 179575493 -20054657 + THE1C LTR MaLR 5 375 0 291 71 0 0 chr5 179576205 179576247 -20053903 + (T)n Simple_repeat Simple_repeat 1 42 0 3184 207 27 10 chr5 179576495 179577199 -20052951 + L1MA9 LINE L1 5559 6274 -38 2280 107 0 0 chr5 179578637 179578936 -20051214 + AluSg1 SINE Alu 3 301 -8 1255 157 29 139 chr5 179580755 179581099 -20049051 - AluYb8 SINE Alu -1 307 2 635 306 38 5 chr5 179582456 179582665 -20047485 - MIR SINE MIR -8 254 39 1855 157 7 30 chr5 179582725 179583030 -20047120 + AluJo SINE Alu 1 298 -14 571 204 105 66 chr5 179583621 179583802 -20046348 + MER5A DNA MER1_type 2 189 0 24 0 0 0 chr5 179584168 179584192 -20045958 + AT_rich Low_complexity Low_complexity 1 24 0 346 255 19 115 chr5 179584846 179585003 -20045147 + MLT1K LTR MaLR 138 279 -309 817 284 19 50 chr5 179585167 179585484 -20044666 + LTR16C LTR ERVL 165 471 -20 261 98 0 0 chr5 179587157 179587198 -20042952 + (CA)n Simple_repeat Simple_repeat 2 42 0 893 63 87 0 chr5 179587233 179587360 -20042790 + MER85 DNA T2_type 2 139 0 1573 154 32 95 chr5 179587514 179587884 -20042266 + MER7A DNA MER2_type 2 346 0 1965 127 20 3 chr5 179588925 179589225 -20040925 - AluSc SINE Alu -4 305 1 208 282 56 14 chr5 179589410 179589481 -20040669 - MIR SINE MIR -82 180 107 601 299 84 32 chr5 179589600 179589884 -20040266 - MLT1I LTR MaLR -29 380 82 1694 183 17 79 chr5 179591251 179591667 -20038483 - MLT1B LTR MaLR 0 390 1 373 228 22 54 chr5 179592216 179592308 -20037842 - L2 LINE L2 0 3313 3225 22 0 0 0 chr5 179592324 179592346 -20037804 + AT_rich Low_complexity Low_complexity 1 22 0 1915 115 59 54 chr5 179592466 179592839 -20037311 - THE1C LTR MaLR 0 375 1 2135 138 0 0 chr5 179593332 179593628 -20036522 - AluSx SINE Alu -15 297 2 2631 222 66 40 chr5 179594046 179594117 -20036033 + L1ME1 LINE L1 4298 4366 -1800 2332 78 3 0 chr5 179594117 179594413 -20035737 - AluY SINE Alu -14 297 1 2631 222 66 40 chr5 179594413 179596018 -20034132 + L1ME1 LINE L1 4366 6010 -156 340 203 0 0 chr5 179596033 179596102 -20034048 + L1MA10 LINE L1 6256 6324 -10 208 145 16 145 chr5 179596243 179596305 -20033845 - L2 LINE L2 0 3272 3219 265 155 86 0 chr5 179596409 179596467 -20033683 + L1PA16 LINE L1 6102 6164 -2 22 0 0 0 chr5 179596528 179596550 -20033600 + AT_rich Low_complexity Low_complexity 1 22 0 10280 177 18 12 chr5 179596571 179599755 -20030395 - L1PB1 LINE L1 -1 6150 2951 189 107 0 0 chr5 179600160 179600188 -20029962 + (CAA)n Simple_repeat Simple_repeat 2 29 0 466 366 52 12 chr5 179600378 179600629 -20029521 + L3 LINE CR1 235 495 -1082 21 36 0 0 chr5 179600841 179600869 -20029281 + AT_rich Low_complexity Low_complexity 1 28 0 1925 110 0 7 chr5 179601748 179602021 -20028129 - AluSc SINE Alu -38 271 1 21 36 0 0 chr5 179602196 179602224 -20027926 + AT_rich Low_complexity Low_complexity 1 28 0 251 300 93 25 chr5 179602333 179602592 -20027558 + L3 LINE CR1 564 893 -684 460 351 79 19 chr5 179602674 179603041 -20027109 - MLT1K LTR MaLR -12 576 188 273 387 21 60 chr5 179603171 179603455 -20026695 + L3 LINE CR1 1087 1359 -218 340 272 12 12 chr5 179605188 179605269 -20024881 + MIR SINE MIR 50 130 -132 442 180 27 64 chr5 179605274 179605326 -20024824 - L1ME1 LINE L1 0 6334 6282 1692 162 0 49 chr5 179605326 179605653 -20024497 + AluJb SINE Alu 2 312 0 442 180 27 64 chr5 179605653 179605726 -20024424 - L1ME1 LINE L1 -52 6282 6056 1341 241 64 42 chr5 179605728 179606208 -20023942 - L1M4 LINE L1 -1318 4828 4331 2101 133 0 0 chr5 179606208 179606501 -20023649 - AluSg SINE Alu -16 294 2 1341 241 64 42 chr5 179606501 179606610 -20023540 - L1M4 LINE L1 -1815 4331 4226 1119 272 40 44 chr5 179606687 179607235 -20022915 - L1M4 LINE L1 -2190 3956 3411 2385 182 19 5 chr5 179607238 179607667 -20022483 + MSTB2 LTR MaLR 23 457 0 390 276 33 53 chr5 179607676 179607828 -20022322 + MIR SINE MIR 112 260 -2 824 278 115 48 chr5 179608719 179609197 -20020953 + MLT1J LTR MaLR 1 510 -1 279 0 0 0 chr5 179610026 179610057 -20020093 + (CCTG)n Simple_repeat Simple_repeat 1 31 0 26 0 0 0 chr5 179610850 179610876 -20019274 + AT_rich Low_complexity Low_complexity 1 26 0 314 263 44 35 chr5 179615606 179615720 -20014430 + MIR SINE MIR 117 231 -31 340 65 0 0 chr5 179616620 179616666 -20013484 - MADE1 DNA Mariner -34 46 1 565 306 171 26 chr5 179617267 179617653 -20012497 - MLT1H LTR MaLR 0 549 108 30 0 0 0 chr5 179617897 179617927 -20012223 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr5 179618235 179618277 -20011873 + AT_rich Low_complexity Low_complexity 1 42 0 347 357 30 15 chr5 179618343 179618542 -20011608 + MIR SINE MIR 61 262 0 1177 403 14 19 chr5 179619396 179619761 -20010389 - MLT1A1 LTR MaLR 0 365 3 233 352 34 0 chr5 179620120 179620208 -20009942 + L2 LINE L2 2872 2962 -310 229 182 45 0 chr5 179620359 179620403 -20009747 + L2 LINE L2 3268 3313 0 656 180 8 0 chr5 179622239 179622367 -20007783 + L1PA13 LINE L1 6028 6156 -7 514 331 53 12 chr5 179623531 179623776 -20006374 - L3 LINE CR1 0 1577 1323 409 298 149 23 chr5 179624231 179624446 -20005704 - L2 LINE L2 -49 3264 3023 184 226 140 43 chr5 179624420 179624513 -20005637 - L3b LINE CR1 -126 1457 1356 * 2233 105 55 17 chr5 179625104 179625465 -20004685 - THE1C LTR MaLR 0 375 1 392 307 122 16 chr5 179627049 179627238 -20002912 - L2 LINE L2 -24 3289 3081 328 277 69 13 chr5 179628059 179628218 -20001932 + MER104 DNA Tc2 3 170 -10 282 329 49 21 chr5 179628253 179628396 -20001754 + MIR SINE MIR 76 222 -40 203 200 13 130 chr5 179629146 179629231 -20000919 + MIR SINE MIR 78 145 -63 1853 123 0 4 chr5 179630342 179630602 -19999548 + AluSc SINE Alu 32 290 -19 316 341 83 21 chr5 179630634 179630799 -19999351 - MIR SINE MIR -62 146 10 476 365 51 47 chr5 179631069 179631428 -19998722 + MLT1K LTR MaLR 10 373 -215 5260 159 27 31 chr5 179631428 179632503 -19997647 - MER11C LTR ERVK 0 1071 1 476 365 51 47 chr5 179632503 179632592 -19997558 + MLT1K LTR MaLR 373 460 -128 1609 218 49 12 chr5 179632692 179633118 -19997032 - L1M4 LINE L1 -866 5280 4839 21 0 0 0 chr5 179633247 179633268 -19996882 + AT_rich Low_complexity Low_complexity 1 21 0 656 250 35 0 chr5 179633979 179634123 -19996027 - MER45A DNA AcHobo 0 178 30 7053 259 30 11 chr5 179634499 179637941 -19992209 + L1PA15 LINE L1 1257 4761 -2823 975 147 81 5 chr5 179637941 179638120 -19992030 + MER51B LTR ERV1 210 377 0 414 93 0 67 chr5 179638147 179638222 -19991928 + MER51B-int LTR ERV1 984 1053 -4893 * 1084 90 6 0 chr5 179638220 179638387 -19991763 + MER51B-int LTR ERV1 6085 6252 -1564 * 1418 160 12 8 chr5 179638379 179638623 -19991527 + MER51B-int LTR ERV1 7571 7815 -1 1631 111 115 4 chr5 179638625 179638878 -19991272 + MER51B LTR ERV1 1 281 -96 9417 201 26 0 chr5 179638905 179639242 -19990908 + L1PA15 LINE L1 4775 5102 -2501 207 0 0 0 chr5 179639242 179639265 -19990885 + (CA)n Simple_repeat Simple_repeat 2 24 0 9417 201 26 0 chr5 179639265 179641708 -19988442 + L1PA15 LINE L1 5102 7597 -6 43 85 0 0 chr5 179641708 179641814 -19988336 + AT_rich Low_complexity Low_complexity 1 106 0 21 0 0 0 chr5 179642047 179642068 -19988082 + AT_rich Low_complexity Low_complexity 1 21 0 276 330 98 9 chr5 179642185 179642297 -19987853 - L2 LINE L2 -1 3312 3191 21 36 0 0 chr5 179642962 179642990 -19987160 + AT_rich Low_complexity Low_complexity 1 28 0 2270 78 3 0 chr5 179643018 179643325 -19986825 - AluY SINE Alu -3 308 1 22 56 0 0 chr5 179643641 179643677 -19986473 + AT_rich Low_complexity Low_complexity 1 36 0 1464 274 81 19 chr5 179643692 179644258 -19985892 + L2 LINE L2 1923 2523 -791 1559 232 24 34 chr5 179644258 179644623 -19985527 + L1MC4a LINE L1 5285 5647 -2161 285 29 0 0 chr5 179644623 179644657 -19985493 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 1559 232 24 34 chr5 179644657 179644700 -19985450 + L1MC4a LINE L1 5647 5689 -2119 350 248 92 50 chr5 179644745 179644886 -19985264 + L1MC4a LINE L1 5799 5945 -1863 725 246 66 38 chr5 179644919 179645130 -19985020 + MER58A DNA MER1_type 7 223 -1 388 263 134 0 chr5 179645138 179645324 -19984826 + L1MC4a LINE L1 6043 6253 -1555 225 294 128 0 chr5 179645490 179645592 -19984558 + L1MC5 LINE L1 7319 7433 -528 2230 108 10 0 chr5 179645604 179645911 -19984239 - AluY SINE Alu -1 310 1 709 278 51 111 chr5 179646405 179647098 -19983052 + L2 LINE L2 2538 3190 -123 225 0 0 0 chr5 179647169 179647194 -19982956 + (A)n Simple_repeat Simple_repeat 1 25 0 24 53 0 0 chr5 179647531 179647569 -19982581 + AT_rich Low_complexity Low_complexity 1 38 0 448 327 64 0 chr5 179648612 179648768 -19981382 + MIR SINE MIR 2 167 -95 22 0 0 0 chr5 179648811 179648833 -19981317 + AT_rich Low_complexity Low_complexity 1 22 0 1294 224 94 17 chr5 179649402 179649764 -19980386 - MLT1B LTR MaLR 0 390 1 1124 272 34 45 chr5 179649771 179650308 -19979842 + L1M4 LINE L1 3426 3956 -2190 257 254 15 0 chr5 179650311 179650378 -19979772 + L1M4 LINE L1 4091 4158 -1988 1341 241 64 42 chr5 179650385 179650494 -19979656 + L1M4 LINE L1 4226 4331 -1815 2101 133 0 0 chr5 179650494 179650787 -19979363 + AluSg SINE Alu 2 294 -16 1341 241 64 42 chr5 179650787 179651267 -19978883 + L1M4 LINE L1 4331 4828 -1318 442 180 27 64 chr5 179651269 179651342 -19978808 + L1ME1 LINE L1 6056 6130 -204 1692 162 0 49 chr5 179651342 179651669 -19978481 - AluJb SINE Alu 0 312 2 442 180 27 64 chr5 179651669 179651721 -19978429 + L1ME1 LINE L1 6130 6334 0 340 272 12 12 chr5 179651726 179651807 -19978343 - MIR SINE MIR -132 130 50 273 387 21 60 chr5 179653540 179653824 -19976326 - L3 LINE CR1 -218 1359 1087 471 351 79 19 chr5 179653954 179654321 -19975829 + MLT1K LTR MaLR 188 576 -12 254 300 93 25 chr5 179654403 179654662 -19975488 - L3 LINE CR1 -684 893 564 21 36 0 0 chr5 179654771 179654799 -19975351 + AT_rich Low_complexity Low_complexity 1 28 0 1886 110 0 7 chr5 179654974 179655247 -19974903 + AluSc SINE Alu 1 271 -38 21 36 0 0 chr5 179656126 179656154 -19973996 + AT_rich Low_complexity Low_complexity 1 28 0 475 366 52 12 chr5 179656366 179656617 -19973533 - L3 LINE CR1 -1082 495 235 189 107 0 0 chr5 179656807 179656835 -19973315 + (TTG)n Simple_repeat Simple_repeat 2 29 0 10390 178 18 12 chr5 179657233 179660424 -19969726 + L1PB1 LINE L1 2944 6150 -1 22 0 0 0 chr5 179660445 179660467 -19969683 + AT_rich Low_complexity Low_complexity 1 22 0 269 155 86 0 chr5 179660528 179660586 -19969564 - L1PA16 LINE L1 -2 6164 6102 206 145 16 145 chr5 179660690 179660752 -19969398 + L2 LINE L2 3219 3272 0 341 203 0 0 chr5 179660893 179660962 -19969188 - L1MA10 LINE L1 -10 6324 6256 6157 236 75 31 chr5 179660977 179662582 -19967568 - L1ME1 LINE L1 -156 6079 4546 2293 78 3 0 chr5 179662582 179662878 -19967272 + AluY SINE Alu 1 297 -14 6157 236 75 31 chr5 179662878 179664417 -19965733 - L1ME1 LINE L1 -1689 4546 2804 2172 298 46 11 chr5 179664452 179665196 -19964954 - L1ME1 LINE L1 -5598 798 29 195 167 0 0 chr5 179666028 179666070 -19964080 + (CGGA)n Simple_repeat Simple_repeat 2 43 0 195 139 0 0 chr5 179667631 179667667 -19962483 + (TG)n Simple_repeat Simple_repeat 2 37 0 2103 125 7 0 chr5 179668501 179668798 -19961352 - AluSc SINE Alu -10 299 1 44 35 0 0 chr5 179668801 179668859 -19961291 + AT_rich Low_complexity Low_complexity 1 58 0 864 159 95 0 chr5 179668875 179669064 -19961086 - L1MA6 LINE L1 0 6300 6094 26 0 0 0 chr5 179669066 179669092 -19961058 + AT_rich Low_complexity Low_complexity 1 26 0 513 47 0 0 chr5 179669258 179669322 -19960828 + (CA)n Simple_repeat Simple_repeat 2 65 0 238 257 243 7 chr5 179670272 179670310 -19959840 + MIR SINE MIR 81 109 -153 1786 154 7 10 chr5 179670310 179670602 -19959548 + AluJb SINE Alu 1 291 -21 238 257 243 7 chr5 179670602 179670699 -19959451 + MIR SINE MIR 109 248 -14 875 268 189 14 chr5 179670982 179671422 -19958728 + LTR33 LTR ERVL 5 521 0 2141 110 81 57 chr5 179673204 179673390 -19956760 - MSTA LTR MaLR 0 428 248 195 42 0 0 chr5 179673390 179673414 -19956736 + (GGGA)n Simple_repeat Simple_repeat 2 25 0 2141 110 81 57 chr5 179673414 179673645 -19956505 - MSTA LTR MaLR -180 248 1 298 365 91 26 chr5 179673681 179673911 -19956239 + MIR SINE MIR 18 262 0 297 359 9 9 chr5 179674167 179674273 -19955877 + MER5B DNA MER1_type 70 175 -3 2694 244 34 11 chr5 179674663 179675852 -19954298 + L1MDa LINE L1 1847 3065 -3475 250 222 81 40 chr5 179676536 179676635 -19953515 - L1ME LINE L1 -464 5657 5555 902 232 96 27 chr5 179677635 179678015 -19952135 - MER57B LTR ERV1 -9 394 10 2351 165 67 11 chr5 179678266 179678715 -19951435 - MER101 LTR ERV1 0 474 1 591 319 135 0 chr5 179678960 179679189 -19950961 - MIR SINE MIR 0 262 3 282 341 0 0 chr5 179679638 179679720 -19950430 - L2 LINE L2 -4 3309 3228 21 100 0 0 chr5 179679864 179679934 -19950216 + AT_rich Low_complexity Low_complexity 1 70 0 23 0 0 0 chr5 179680101 179680124 -19950026 + AT_rich Low_complexity Low_complexity 1 23 0 459 348 55 68 chr5 179680555 179681009 -19949141 + L1ME3 LINE L1 5493 5940 -222 2198 151 49 10 chr5 179681067 179681477 -19948673 - MSTA LTR MaLR 0 428 3 321 68 0 0 chr5 179681510 179681554 -19948596 + (GGGA)n Simple_repeat Simple_repeat 3 46 0 3684 196 63 9 chr5 179681711 179682451 -19947699 + MSTA-int LTR MaLR 872 1651 0 2109 173 62 7 chr5 179682451 179682855 -19947295 + MSTA LTR MaLR 1 426 -2 21 0 0 0 chr5 179683177 179683198 -19946952 + AT_rich Low_complexity Low_complexity 1 21 0 191 256 23 0 chr5 179683405 179683448 -19946702 + L2 LINE L2 3210 3253 -19 22 0 0 0 chr5 179683462 179683484 -19946666 + AT_rich Low_complexity Low_complexity 1 22 0 288 146 19 39 chr5 179684308 179684411 -19945739 + (CATATA)n Simple_repeat Simple_repeat 2 102 0 21 57 0 0 chr5 179684849 179684884 -19945266 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr5 179685169 179685204 -19944946 + AT_rich Low_complexity Low_complexity 1 35 0 605 211 81 0 chr5 179685448 179685571 -19944579 + FLAM_C SINE Alu 1 133 -10 1861 196 120 98 chr5 179685954 179686283 -19943867 - MER77 LTR ERV1 0 605 285 306 0 0 0 chr5 179686283 179686317 -19943833 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 1891 135 0 0 chr5 179686322 179686596 -19943554 - AluSx SINE Alu -38 274 1 1861 196 120 98 chr5 179686596 179686852 -19943298 - MER77 LTR ERV1 -323 282 1 623 276 28 120 chr5 179687272 179687376 -19942774 + L2 LINE L2 2958 3070 -243 316 109 234 0 chr5 179687376 179687440 -19942710 - MER116 DNA Mariner -1 79 1 623 276 28 120 chr5 179687440 179687727 -19942423 + L2 LINE L2 3070 3313 0 426 306 38 59 chr5 179687824 179688010 -19942140 + MIR SINE MIR 2 183 -79 1040 292 85 66 chr5 179688965 179689090 -19941060 + L1MEd LINE L1 4 125 -6004 1845 197 8 11 chr5 179689090 179689456 -19940694 + MLT1A1 LTR MaLR 1 365 0 1040 292 85 66 chr5 179689456 179690418 -19939732 + L1MEd LINE L1 125 1109 -5020 1513 151 62 4 chr5 179690418 179690535 -19939615 + AluJb SINE Alu 1 110 -202 180 97 0 0 chr5 179690535 179690566 -19939584 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1513 151 62 4 chr5 179690566 179690720 -19939430 + AluJb SINE Alu 110 288 -24 1040 292 85 66 chr5 179690720 179690881 -19939269 + L1MEd LINE L1 1109 1266 -4863 966 70 0 0 chr5 179691676 179691805 -19938345 + L1PA5 LINE L1 6021 6149 -5 364 298 71 0 chr5 179692021 179692162 -19937988 - MIR SINE MIR -13 249 99 1567 129 36 95 chr5 179692205 179692333 -19937817 + L1MA8 LINE L1 5950 6084 -207 1779 158 0 43 chr5 179692333 179692656 -19937494 + AluJb SINE Alu 1 309 -3 1567 129 36 95 chr5 179692656 179692884 -19937266 + L1MA8 LINE L1 6084 6285 -6 207 205 0 0 chr5 179693459 179693498 -19936652 + CT-rich Low_complexity Low_complexity 1 39 0 317 320 180 10 chr5 179693872 179694066 -19936084 - L1 LINE L1 -2192 3954 3728 1843 158 30 8 chr5 179694088 179694455 -19935695 + L1MA5 LINE L1 5920 6294 -6 263 89 0 44 chr5 179695862 179695907 -19934243 - Alu SINE Alu -11 291 249 293 281 52 52 chr5 179696139 179696274 -19933876 - MIR SINE MIR -70 192 58 21 0 0 0 chr5 179696696 179696717 -19933433 + AT_rich Low_complexity Low_complexity 1 21 0 399 350 31 31 chr5 179697251 179697477 -19932673 + MIR SINE MIR 35 260 -2 23 33 0 0 chr5 179697612 179697642 -19932508 + AT_rich Low_complexity Low_complexity 1 30 0 250 303 32 21 chr5 179697793 179697981 -19932169 - L1 LINE L1 -3696 2450 2261 204 206 0 0 chr5 179698324 179698358 -19931792 + polypyrimidine Low_complexity Low_complexity 2 35 0 335 333 70 19 chr5 179698431 179698644 -19931506 - HAL1b LINE L1 -437 911 688 532 295 76 51 chr5 179699227 179699780 -19930370 + L1MEc LINE L1 25 591 -5805 237 196 0 0 chr5 179699847 179699903 -19930247 + GA-rich Low_complexity Low_complexity 4 59 0 246 282 13 0 chr5 179699975 179700053 -19930097 + L1MEc LINE L1 691 769 -5436 637 288 24 13 chr5 179700100 179700478 -19929672 + L1M4 LINE L1 3688 4274 -1872 481 298 43 8 chr5 179700481 179700716 -19929434 - L1M4 LINE L1 -2106 4040 3798 1068 239 56 16 chr5 179700717 179701022 -19929128 + L1ME1 LINE L1 5845 6161 -5 211 365 56 28 chr5 179701829 179701936 -19928214 + L2 LINE L2 2979 3088 -184 307 306 89 40 chr5 179702693 179702817 -19927333 + L2 LINE L2 3143 3272 0 331 250 36 0 chr5 179703409 179703493 -19926657 - L2 LINE L2 0 3313 3227 2061 111 29 37 chr5 179703762 179704140 -19926010 - THE1C LTR MaLR 0 375 1 2114 104 0 0 chr5 179705715 179706002 -19924148 + AluSx SINE Alu 3 289 -23 2616 120 8 0 chr5 179706512 179706911 -19923239 - L1PA15 LINE L1 0 6165 5764 1649 116 26 15 chr5 179706911 179707179 -19922971 + L1PA15 LINE L1 5486 5756 -409 211 130 43 33 chr5 179707375 179707467 -19922683 + (TTATA)n Simple_repeat Simple_repeat 1 93 0 234 0 0 0 chr5 179707561 179707587 -19922563 + (TG)n Simple_repeat Simple_repeat 2 27 0 2517 50 0 0 chr5 179707816 179708116 -19922034 - AluY SINE Alu -10 301 2 5393 21 2 0 chr5 179709558 179710182 -19919968 - L1PA3 LINE L1 -10 6145 5521 565 27 0 13 chr5 179710182 179710295 -19919855 + L1PA3 LINE L1 6080 6155 0 335 218 234 8 chr5 179711023 179711147 -19919003 + MIR SINE MIR 98 249 -13 2679 102 25 19 chr5 179711615 179712048 -19918102 + L1MA3 LINE L1 5870 6305 0 193 306 111 46 chr5 179712533 179712641 -19917509 - L2 LINE L2 0 3313 3199 200 266 0 0 chr5 179712821 179713189 -19916961 + A-rich Low_complexity Low_complexity 1 64 0 1886 161 3 0 chr5 179712844 179713190 -19916960 + AluSx SINE Alu 7 353 0 468 280 45 32 chr5 179713195 179713352 -19916798 + MLT1I LTR MaLR 41 199 -210 432 341 167 30 chr5 179713593 179714259 -19915891 - L2 LINE L2 -457 2857 2101 29 28 0 0 chr5 179714450 179714486 -19915664 + AT_rich Low_complexity Low_complexity 1 36 0 2113 106 0 32 chr5 179715912 179716223 -19913927 + AluY SINE Alu 1 301 -10 4002 201 78 12 chr5 179716226 179717326 -19912824 - L1MB7 LINE L1 -15 6667 5417 * 4813 258 52 52 chr5 179717316 179718232 -19911918 - L1MB7 LINE L1 -3629 3015 2101 1033 224 108 29 chr5 179718232 179718509 -19911641 - AluJo SINE Alu -3 299 1 4813 258 52 52 chr5 179718509 179719160 -19910990 - L1MB7 LINE L1 -4543 2101 1452 2154 119 0 0 chr5 179719160 179719455 -19910695 - AluSq SINE Alu -18 295 1 4813 258 52 52 chr5 179719455 179720586 -19909564 - L1MB7 LINE L1 -5192 1452 192 2418 62 0 0 chr5 179720586 179720893 -19909257 - AluY SINE Alu -4 307 1 4813 258 52 52 chr5 179720893 179721059 -19909091 - L1MB7 LINE L1 -6452 192 28 21 36 0 0 chr5 179721434 179721462 -19908688 + AT_rich Low_complexity Low_complexity 1 28 0 650 329 75 43 chr5 179722314 179722372 -19907778 - L2 LINE L2 0 3313 3258 1542 181 63 14 chr5 179722372 179722720 -19907430 - MLT1A1 LTR MaLR 0 365 1 650 329 75 43 chr5 179722720 179723314 -19906836 - L2 LINE L2 -55 3258 2638 22 0 0 0 chr5 179725318 179725340 -19904810 + AT_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr5 179725372 179725407 -19904743 + AT_rich Low_complexity Low_complexity 1 35 0 250 241 0 0 chr5 179726540 179726598 -19903552 - L2 LINE L2 0 3272 3215 29 0 0 0 chr5 179727122 179727151 -19902999 + AT_rich Low_complexity Low_complexity 1 29 0 1700 167 51 3 chr5 179727825 179728119 -19902031 - AluJb SINE Alu -2 310 3 2711 170 234 9 chr5 179729255 179729836 -19900314 - LTR28 LTR ERV1 0 1020 309 1058 174 49 0 chr5 179729819 179730003 -19900147 - LTR28 LTR ERV1 -827 193 1 * 233 120 40 0 chr5 179730125 179730175 -19899975 + T-rich Low_complexity Low_complexity 2 53 0 210 198 47 12 chr5 179730928 179731014 -19899136 + (TA)n Simple_repeat Simple_repeat 2 90 0 247 319 30 67 chr5 179731424 179731521 -19898629 + L2 LINE L2 3141 3233 -39 555 199 86 95 chr5 179731521 179731742 -19898408 - MER20 DNA MER1_type 0 219 1 247 319 30 67 chr5 179731742 179731779 -19898371 + L2 LINE L2 3233 3270 -2 438 235 49 88 chr5 179733346 179733550 -19896600 + LTR33A LTR ERVL 2 197 -326 255 31 0 0 chr5 179733834 179733866 -19896284 + (TG)n Simple_repeat Simple_repeat 2 33 0 785 300 158 19 chr5 179734735 179735372 -19894778 + L2 LINE L2 2121 3280 -33 182 37 37 0 chr5 179735394 179735421 -19894729 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 245 259 25 49 chr5 179735970 179736051 -19894099 + L2 LINE L2 3193 3271 -1 615 283 89 21 chr5 179736485 179736810 -19893340 - L1M4 LINE L1 -2543 3603 3257 1846 135 4 4 chr5 179737145 179737419 -19892731 - AluY SINE Alu -19 292 19 26 30 0 0 chr5 179737973 179738006 -19892144 + AT_rich Low_complexity Low_complexity 1 33 0 250 278 0 11 chr5 179738156 179738246 -19891904 + CT-rich Low_complexity Low_complexity 2 90 0 766 243 27 64 chr5 179738477 179738604 -19891546 + L1ME2 LINE L1 5366 5496 -838 1913 151 0 3 chr5 179738604 179738909 -19891241 - AluJo SINE Alu -8 304 1 766 243 27 64 chr5 179738909 179739531 -19890619 + L1ME2 LINE L1 5496 6331 -3 300 332 123 36 chr5 179739853 179740086 -19890064 - L2 LINE L2 -221 3051 2799 1570 142 16 8 chr5 179740231 179740485 -19889665 - MLT1B LTR MaLR -134 256 1 585 257 30 33 chr5 179740576 179740981 -19889169 + L1MEc LINE L1 2041 2391 -3824 220 224 0 0 chr5 179741305 179741354 -19888796 + (TAA)n Simple_repeat Simple_repeat 2 50 0 24 32 0 0 chr5 179741454 179741485 -19888665 + AT_rich Low_complexity Low_complexity 1 31 0 224 274 78 29 chr5 179741956 179742058 -19888092 + L2 LINE L2 3207 3313 0 737 268 26 5 chr5 179843426 179843620 -19786530 - MER45C DNA AcHobo -752 201 4 470 314 124 5 chr5 179843682 179843876 -19786274 + MER45C DNA AcHobo 416 632 -321 256 226 0 0 chr5 179843872 179843925 -19786225 + MER45C DNA AcHobo 899 951 -2 * 835 187 119 104 chr5 179844082 179844467 -19785683 - MSTD LTR MaLR -1 395 5 3614 45 18 0 chr5 179844475 179844923 -19785227 - L1PA4 LINE L1 -1 6154 5699 543 203 155 18 chr5 179845073 179845107 -19785043 - MER5A DNA MER1_type 0 189 161 2616 105 3 6 chr5 179845107 179845468 -19784682 + THE1B LTR MaLR 5 364 0 543 203 155 18 chr5 179845468 179845589 -19784561 - MER5A DNA MER1_type -28 161 8 1043 202 0 0 chr5 179846327 179846515 -19783635 - MER5A DNA MER1_type 0 189 2 264 322 78 0 chr5 179847064 179847179 -19782971 - MER117 DNA MER1_type -72 125 2 196 370 53 53 chr5 179847199 179847426 -19782724 + L2 LINE L2 2883 3109 -163 355 303 40 0 chr5 179847513 179847612 -19782538 - L2 LINE L2 -1 3271 3169 395 339 23 23 chr5 179848639 179848816 -19781334 - MER5A DNA MER1_type -1 188 12 1014 132 11 108 chr5 179848869 179849249 -19780901 + Tigger2a DNA MER2_type 2 443 -1 385 301 71 54 chr5 179849528 179849767 -19780383 - MIR SINE MIR -6 256 14 1446 230 88 53 chr5 179851476 179851963 -19778187 - MLT1D LTR MaLR -1 504 1 678 288 88 47 chr5 179852435 179852800 -19777350 - MLT1J2 LTR MaLR -21 429 50 2176 75 4 4 chr5 179853210 179853488 -19776662 - AluY SINE Alu -33 278 1 294 327 175 0 chr5 179853635 179853852 -19776298 + MIR SINE MIR 8 262 0 440 311 23 30 chr5 179854850 179854982 -19775168 + MIR SINE MIR 10 140 -122 215 401 144 0 chr5 179855363 179855565 -19774585 + L3 LINE CR1 965 1195 -382 824 150 64 21 chr5 179855574 179855761 -19774389 - L1ME LINE L1 -424 5740 5546 188 237 161 68 chr5 179856940 179857022 -19773128 - MIR SINE MIR -2 260 162 855 207 13 69 chr5 179857022 179857179 -19772971 - MER20 DNA MER1_type 0 219 78 2124 146 0 0 chr5 179857179 179857487 -19772663 + AluJb SINE Alu 5 312 0 855 207 13 69 chr5 179857487 179857561 -19772589 - MER20 DNA MER1_type -141 78 1 188 237 161 68 chr5 179857561 179857596 -19772554 - MIR SINE MIR -100 162 132 976 242 11 0 chr5 179858143 179858333 -19771817 + MER58A DNA MER1_type 30 221 -3 482 288 127 19 chr5 179858526 179858738 -19771412 - MIR SINE MIR -21 241 7 407 326 34 7 chr5 179858905 179859052 -19771098 - L2 LINE L2 0 3313 3163 2026 121 0 4 chr5 179859672 179859953 -19770197 + AluSx SINE Alu 1 280 -32 25 65 0 0 chr5 179860048 179860094 -19770056 + AT_rich Low_complexity Low_complexity 1 46 0 1962 169 31 8 chr5 179860214 179860372 -19769778 + LOR1b LTR ERV1 94 247 -214 287 65 22 0 chr5 179860372 179860418 -19769732 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 1962 169 31 8 chr5 179860418 179860619 -19769531 + LOR1b LTR ERV1 247 461 0 298 323 98 38 chr5 179860625 179860758 -19769392 - MIR SINE MIR -119 143 3 300 227 61 30 chr5 179860793 179860904 -19769246 + L2 LINE L2 2794 2907 -406 772 333 65 16 chr5 179861205 179861589 -19768561 + L2 LINE L2 2911 3313 0 223 202 24 24 chr5 179861887 179861971 -19768179 + (CATA)n Simple_repeat Simple_repeat 3 86 0 2112 128 3 0 chr5 179862037 179862333 -19767817 + AluSp SINE Alu 1 297 -16 28 61 0 0 chr5 179862918 179862967 -19767183 + AT_rich Low_complexity Low_complexity 1 49 0 2398 175 50 59 chr5 179862976 179863095 -19767055 + L1MD1 LINE L1 5643 5762 -480 1890 152 14 0 chr5 179863095 179863385 -19766765 - AluSx SINE Alu -18 294 1 2398 175 50 59 chr5 179863385 179863871 -19766279 + L1MD1 LINE L1 5762 6242 0 2532 57 0 0 chr5 179863885 179864186 -19765964 + AluY SINE Alu 1 301 -10 440 324 65 16 chr5 179864649 179864834 -19765316 + MIR SINE MIR 50 243 -19 2265 115 0 0 chr5 179865064 179865369 -19764781 + AluSx SINE Alu 1 305 -7 23 33 0 0 chr5 179865675 179865705 -19764445 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr5 179865767 179865802 -19764348 + AT_rich Low_complexity Low_complexity 1 35 0 353 321 289 5 chr5 179866983 179867201 -19762949 + L3 LINE CR1 1293 1572 -5 320 325 182 20 chr5 179868094 179868259 -19761891 - L3 LINE CR1 -67 1510 1373 2396 69 0 19 chr5 179868259 179868576 -19761574 - AluY SINE Alu 0 311 1 320 325 182 20 chr5 179868576 179868712 -19761438 - L3 LINE CR1 -204 1373 1160 4861 92 3 27 chr5 179869608 179870311 -19759839 + L1PA11 LINE L1 5487 6172 -2 1715 272 85 19 chr5 179870460 179871207 -19758943 + L1ME3A LINE L1 5356 6165 -5 2182 107 7 0 chr5 179871399 179871688 -19758462 + AluSg SINE Alu 6 296 -14 768 248 28 28 chr5 179873195 179873413 -19756737 - MER20 DNA MER1_type 0 219 2 2514 154 37 0 chr5 179873444 179873847 -19756303 - MSTB LTR MaLR -7 419 2 748 180 36 93 chr5 179874670 179874799 -19755351 + MER3 DNA MER1_type 2 119 -90 2172 90 4 0 chr5 179874799 179875114 -19755036 - AluSc SINE Alu 0 316 1 748 180 36 93 chr5 179875114 179875177 -19754973 + MER3 DNA MER1_type 119 184 -25 617 249 41 40 chr5 179876246 179876646 -19753504 + LTR37B LTR ERV1 28 468 0 934 232 143 27 chr5 179876790 179877118 -19753032 + L1ME3A LINE L1 5797 6162 -8 28 29 0 0 chr5 179877596 179877631 -19752519 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 179879225 179879248 -19750902 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr5 179879751 179879783 -19750367 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 780 225 56 0 chr5 179880545 179880723 -19749427 - MER5A DNA MER1_type -1 188 1 634 204 0 15 chr5 179881044 179881181 -19748969 - FLAM_C SINE Alu -2 141 7 1751 164 4 4 chr5 179881208 179881482 -19748668 - AluJo SINE Alu -28 284 11 903 134 41 21 chr5 179881849 179882043 -19748107 - L1MA7 LINE L1 -1 6290 6093 522 152 0 30 chr5 179882043 179882142 -19748008 + L1MA7 LINE L1 6009 6104 -187 1186 173 60 60 chr5 179883376 179883509 -19746641 + AluJo SINE Alu 6 141 -171 441 0 0 0 chr5 179883509 179883558 -19746592 + (CA)n Simple_repeat Simple_repeat 2 50 0 1186 173 60 60 chr5 179883558 179883673 -19746477 + AluJo SINE Alu 140 254 -58 913 142 22 77 chr5 179883711 179883894 -19746256 - AluJb SINE Alu -16 296 124 2653 214 33 22 chr5 179884409 179885427 -19744723 + L1MB8 LINE L1 4969 5991 -187 591 190 49 37 chr5 179886919 179887082 -19743068 - L1MEc LINE L1 -4677 1719 1555 234 184 0 79 chr5 179887082 179887158 -19742992 - L1MEc LINE L1 -4896 1319 1250 2310 249 77 31 chr5 179887222 179887264 -19742886 - L1MEc LINE L1 -5163 1233 1194 1708 193 3 3 chr5 179887264 179887575 -19742575 - AluJb SINE Alu -1 311 1 2310 249 77 31 chr5 179887575 179888365 -19741785 - L1MEc LINE L1 -5202 1194 363 386 175 0 175 chr5 179888401 179888555 -19741595 - L1MEc LINE L1 -6212 184 58 811 128 0 154 chr5 179888799 179888987 -19741163 - AluJb SINE Alu -20 292 134 6126 91 14 3 chr5 179889608 179890963 -19739187 - L1PA10 LINE L1 -8 6475 5122 19214 180 24 28 chr5 179890975 179895326 -19734824 - L1PA10 LINE L1 -1514 4947 617 2344 103 0 0 chr5 179895379 179895681 -19734469 + AluSc SINE Alu 1 302 -7 1421 204 122 0 chr5 179895821 179896125 -19734025 - MLT1D LTR MaLR -63 442 102 251 167 0 0 chr5 179896199 179896247 -19733903 + Charlie8 DNA MER1_type 1372 1419 -998 2322 104 0 0 chr5 179896356 179896653 -19733497 + AluSx SINE Alu 1 297 -15 225 224 0 20 chr5 179896984 179897033 -19733117 + T-rich Low_complexity Low_complexity 2 49 0 40 49 0 0 chr5 179897100 179897161 -19732989 + AT_rich Low_complexity Low_complexity 1 61 0 1854 157 0 17 chr5 179897246 179897576 -19732574 - AluSx SINE Alu 0 312 4 26 30 0 0 chr5 179898109 179898142 -19732008 + AT_rich Low_complexity Low_complexity 1 33 0 1258 161 0 82 chr5 179898309 179898576 -19731574 - L1M3 LINE L1 -480 5691 5447 225 292 110 7 chr5 179899057 179899211 -19730939 + L1 LINE L1 3623 3792 -2354 428 287 74 8 chr5 179899460 179899659 -19730491 - MIR SINE MIR 0 262 51 2039 130 3 7 chr5 179900173 179900474 -19729676 + AluSg SINE Alu 1 300 -10 21 36 0 0 chr5 179900726 179900754 -19729396 + AT_rich Low_complexity Low_complexity 1 28 0 27 49 0 0 chr5 179901752 179901793 -19728357 + AT_rich Low_complexity Low_complexity 1 41 0 23 78 0 0 chr5 179901864 179901915 -19728235 + AT_rich Low_complexity Low_complexity 1 51 0 189 400 48 40 chr5 179902147 179902272 -19727878 - L2 LINE L2 -20 3252 3127 28 79 0 0 chr5 179902950 179903013 -19727137 + AT_rich Low_complexity Low_complexity 1 63 0 265 367 91 0 chr5 179903789 179903988 -19726162 - L1ME LINE L1 -254 5867 5651 1760 156 13 16 chr5 179904022 179904329 -19725821 - AluSx SINE Alu -6 306 1 469 56 92 7 chr5 179904683 179904825 -19725325 + (TA)n Simple_repeat Simple_repeat 2 155 0 43 20 0 0 chr5 179904836 179904886 -19725264 + AT_rich Low_complexity Low_complexity 1 50 0 2369 86 0 0 chr5 179905046 179905349 -19724801 + AluY SINE Alu 1 303 -8 594 345 84 0 chr5 179905680 179905967 -19724183 - L2 LINE L2 -532 2782 2472 1220 248 75 50 chr5 179906113 179906524 -19723626 + MLT1D LTR MaLR 36 461 -44 2303 105 0 0 chr5 179906524 179906830 -19723320 - AluY SINE Alu -5 306 1 1220 248 75 50 chr5 179906830 179906873 -19723277 + MLT1D LTR MaLR 461 501 -4 986 185 10 24 chr5 179906877 179907082 -19723068 + MLT1D-int LTR MaLR 1 202 -1169 * 1102 191 0 5 chr5 179907073 179907282 -19722868 + MLT1D-int LTR MaLR 399 606 -765 4607 137 82 36 chr5 179907342 179907535 -19722615 + MER4D LTR ERV1 1 184 -719 1915 128 0 0 chr5 179907535 179907829 -19722321 + AluSq SINE Alu 32 325 0 4607 137 82 36 chr5 179907829 179908487 -19721663 + MER4D LTR ERV1 184 894 -9 535 200 67 0 chr5 179908574 179908679 -19721471 + MLT1D-int LTR MaLR 661 772 -599 1935 181 126 47 chr5 179908693 179909223 -19720927 - LTR49 LTR ERV1 -23 572 1 1304 246 56 97 chr5 179909223 179909328 -19720822 + MLT1D-int LTR MaLR 769 877 -858 3342 148 90 32 chr5 179909328 179910015 -19720135 + LTR8A LTR ERV1 1 727 0 1304 246 56 97 chr5 179910015 179910559 -19719591 + MLT1D-int LTR MaLR 877 1733 -2 1530 223 98 23 chr5 179910561 179911031 -19719119 + MLT1D LTR MaLR 1 505 0 553 295 66 38 chr5 179911777 179912065 -19718085 - L2 LINE L2 -2 3311 3016 500 275 135 34 chr5 179914026 179914233 -19715917 + MIR SINE MIR 33 260 -2 201 333 0 0 chr5 179914435 179914498 -19715652 + CT-rich Low_complexity Low_complexity 2 64 0 252 313 133 39 chr5 179914569 179914697 -19715453 - MIR3 SINE MIR -48 160 21 257 197 42 70 chr5 179916666 179916737 -19713413 + MER5B DNA MER1_type 50 118 -60 240 211 35 0 chr5 179916741 179916798 -19713352 + (TATG)n Simple_repeat Simple_repeat 2 60 0 277 170 0 0 chr5 179916799 179916846 -19713304 - MER5B DNA MER1_type -131 47 1 27 29 0 0 chr5 179917003 179917037 -19713113 + AT_rich Low_complexity Low_complexity 1 34 0 307 293 63 84 chr5 179917414 179917605 -19712545 - MIR SINE MIR -72 190 4 4038 206 40 69 chr5 179918020 179918643 -19711507 + L1MD1 LINE L1 4439 5079 -1163 2029 92 61 14 chr5 179918643 179918936 -19711214 + AluSq SINE Alu 1 307 -6 4038 206 40 69 chr5 179918936 179919137 -19711013 + L1MD1 LINE L1 5079 5284 -958 2304 101 0 0 chr5 179919137 179919445 -19710705 + AluSg SINE Alu 1 308 -2 4038 206 40 69 chr5 179919445 179920163 -19709987 + L1MD1 LINE L1 5284 5896 -346 1972 119 16 33 chr5 179920163 179920466 -19709684 + AluSx SINE Alu 1 298 -14 4038 206 40 69 chr5 179920466 179920803 -19709347 + L1MD1 LINE L1 5896 6241 -1 24 53 0 0 chr5 179922739 179922777 -19707373 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 179922854 179922876 -19707274 + AT_rich Low_complexity Low_complexity 1 22 0 1992 140 54 26 chr5 179923048 179923398 -19706752 - THE1B LTR MaLR 0 364 5 32 26 0 0 chr5 179923467 179923506 -19706644 + AT_rich Low_complexity Low_complexity 1 39 0 2378 159 25 27 chr5 179923757 179924246 -19705904 - L1MA9 LINE L1 0 6312 5825 193 333 65 43 chr5 179924747 179924885 -19705265 - L2 LINE L2 -4 3309 3169 184 369 115 8 chr5 179925059 179925181 -19704969 - L2 LINE L2 -302 2970 2836 24 53 0 0 chr5 179926068 179926106 -19704044 + AT_rich Low_complexity Low_complexity 1 38 0 1564 197 7 3 chr5 179926109 179926398 -19703752 - AluJo SINE Alu -20 292 3 249 290 140 36 chr5 179926773 179926966 -19703184 + MIR SINE MIR 49 261 -1 706 214 105 2 chr5 179927077 179927270 -19702880 + L1MC/D LINE L1 5484 5692 -550 2183 112 3 6 chr5 179927867 179928181 -19701969 - AluSp SINE Alu 0 313 1 28 48 0 0 chr5 179928184 179928226 -19701924 + AT_rich Low_complexity Low_complexity 1 42 0 39 50 0 0 chr5 179928669 179928729 -19701421 + AT_rich Low_complexity Low_complexity 1 60 0 291 331 69 50 chr5 179929173 179929333 -19700817 + MIR SINE MIR 52 214 -48 195 114 0 0 chr5 179929405 179929440 -19700710 + (ATG)n Simple_repeat Simple_repeat 3 37 0 882 310 105 14 chr5 179929510 179929949 -19700201 - LTR16C LTR ERVL -12 479 1 30 77 0 0 chr5 179930524 179930589 -19699561 + AT_rich Low_complexity Low_complexity 1 65 0 1939 138 34 0 chr5 179932317 179932613 -19697537 + AluSx SINE Alu 1 306 -6 317 346 77 43 chr5 179933523 179933850 -19696300 - L2 LINE L2 -442 2872 2535 4822 159 30 10 chr5 179934470 179935263 -19694887 + L1PA15-16 LINE L1 1 809 -6040 1997 271 44 11 chr5 179935241 179935880 -19694270 + L1ME1 LINE L1 6208 6867 -2 * 189 74 0 0 chr5 179936172 179936199 -19693951 + (A)n Simple_repeat Simple_repeat 1 27 0 240 384 108 30 chr5 179936485 179936717 -19693433 - L2 LINE L2 -2119 1195 946 2137 109 0 34 chr5 179937269 179937589 -19692561 + AluSc SINE Alu 1 309 0 1984 130 10 3 chr5 179938106 179938406 -19691744 - AluSx SINE Alu -10 302 1 261 363 115 0 chr5 179938711 179938824 -19691326 + L3 LINE CR1 1007 1132 -445 417 247 110 87 chr5 179938832 179939051 -19691099 + MIR SINE MIR 12 235 -27 327 347 68 27 chr5 179939186 179939408 -19690742 + L3 LINE CR1 1338 1568 -9 2001 82 4 15 chr5 179939710 179939978 -19690172 + AluSx SINE Alu 34 298 -14 22 0 0 0 chr5 179940762 179940784 -19689366 + AT_rich Low_complexity Low_complexity 1 22 0 217 283 9 35 chr5 179941115 179941228 -19688922 + (CATATA)n Simple_repeat Simple_repeat 3 112 0 238 138 0 46 chr5 179941228 179941293 -19688857 + (TATG)n Simple_repeat Simple_repeat 4 65 0 2366 78 0 10 chr5 179942156 179942465 -19687685 + AluY SINE Alu 1 306 -5 1484 200 26 49 chr5 179942496 179942767 -19687383 - MER58B DNA MER1_type -2079 341 78 4506 90 9 9 chr5 179942767 179943410 -19686740 - L1PA10 LINE L1 0 6168 5526 1484 200 26 49 chr5 179943410 179943483 -19686667 - MER58B DNA MER1_type -2342 78 5 1336 257 77 38 chr5 179944455 179944934 -19685216 + MLT1D LTR MaLR 1 498 -7 379 351 58 16 chr5 179945081 179945269 -19684881 - L3 LINE CR1 -102 1475 1280 187 271 0 0 chr5 179945574 179945622 -19684528 - MIR SINE MIR -105 157 110 1658 124 13 52 chr5 179945740 179946047 -19684103 - AluSx SINE Alu -17 295 1 287 317 44 67 chr5 179946080 179946260 -19683890 - L3 LINE CR1 -601 976 801 328 333 86 16 chr5 179946495 179946738 -19683412 - L1MB5 LINE L1 -249 5925 5666 294 276 83 34 chr5 179946863 179947128 -19683022 - L1MB5 LINE L1 -1128 5018 4741 1831 164 0 3 chr5 179948089 179948387 -19681763 - AluSx SINE Alu -15 297 1 344 329 41 36 chr5 179949127 179949346 -19680804 + L1MC/D LINE L1 5435 5654 -2154 207 0 0 0 chr5 179950422 179950445 -19679705 + (A)n Simple_repeat Simple_repeat 1 23 0 951 216 128 59 chr5 179952817 179953090 -19677060 + AluJo SINE Alu 1 292 -10 21 57 0 0 chr5 179953356 179953391 -19676759 + AT_rich Low_complexity Low_complexity 1 35 0 955 107 8 0 chr5 179953789 179953920 -19676230 + AluSc SINE Alu 1 132 -177 245 181 0 56 chr5 179954982 179955054 -19675096 + L1MC4 LINE L1 6648 6715 -1327 274 281 0 22 chr5 179955944 179956033 -19674117 + (CATATA)n Simple_repeat Simple_repeat 2 88 0 1873 152 0 7 chr5 179956166 179956475 -19673675 + AluSx SINE Alu 1 307 -5 1128 87 0 0 chr5 179956654 179956803 -19673347 + AluY SINE Alu 151 299 -12 228 353 82 0 chr5 179957042 179957127 -19673023 + MER5A DNA MER1_type 98 189 0 29 0 0 0 chr5 179958788 179958817 -19671333 + AT_rich Low_complexity Low_complexity 1 29 0 1814 164 0 22 chr5 179960643 179960955 -19669195 - AluJo SINE Alu -7 305 1 2813 146 64 22 chr5 179963708 179963971 -19666179 + L1MA8 LINE L1 5720 5971 -320 483 107 0 0 chr5 179963971 179964046 -19666104 + (TG)n Simple_repeat Simple_repeat 1 75 0 2813 146 64 22 chr5 179964046 179964150 -19666000 + L1MA8 LINE L1 5971 6069 -222 2201 96 0 0 chr5 179964150 179964462 -19665688 + AluSc SINE Alu 1 312 0 2813 146 64 22 chr5 179964462 179964641 -19665509 + L1MA8 LINE L1 6069 6291 0 957 295 108 46 chr5 179964663 179965172 -19664978 + L2 LINE L2 2516 3099 -214 1649 110 0 0 chr5 179965172 179965390 -19664760 - AluSg/x SINE Alu -10 302 85 957 295 108 46 chr5 179965390 179965602 -19664548 + L2 LINE L2 3099 3297 -16 2372 157 13 52 chr5 179965630 179965847 -19664303 - MER83 LTR ERV1 0 448 257 2007 150 0 0 chr5 179965847 179966154 -19663996 - AluSx SINE Alu -5 307 1 2372 157 13 52 chr5 179966154 179966400 -19663750 - MER83 LTR ERV1 -191 257 3 1535 231 60 13 chr5 179966671 179967057 -19663093 - MER74A LTR ERVL -27 531 128 1165 188 3 97 chr5 179967510 179967839 -19662311 - AluJb SINE Alu -3 299 2 231 114 0 0 chr5 179968021 179968056 -19662094 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr5 179968382 179968404 -19661746 + AT_rich Low_complexity Low_complexity 1 22 0 548 225 99 28 chr5 179968404 179968546 -19661604 + AluJb SINE Alu 136 287 -25 21 0 0 0 chr5 179968546 179968567 -19661583 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr5 179971477 179971521 -19658629 + AT_rich Low_complexity Low_complexity 1 44 0 201 83 28 28 chr5 179971867 179971903 -19658247 + (TTCTC)n Simple_repeat Simple_repeat 5 40 0 195 42 0 0 chr5 179972808 179972832 -19657318 + (TTC)n Simple_repeat Simple_repeat 1 24 0 396 257 191 15 chr5 179972938 179973074 -19657076 + MER5A DNA MER1_type 30 189 0 512 291 43 103 chr5 179973285 179973636 -19656514 - L2 LINE L2 -25 3247 2918 22 0 0 0 chr5 179974165 179974187 -19655963 + AT_rich Low_complexity Low_complexity 1 22 0 261 57 0 0 chr5 179975266 179975301 -19654849 + (TG)n Simple_repeat Simple_repeat 1 35 0 2820 150 42 40 chr5 179975370 179975969 -19654181 + L1MB3 LINE L1 5581 6180 -3 277 222 0 16 chr5 179977301 179977364 -19652786 - MIR SINE MIR 0 262 201 775 310 79 5 chr5 179977385 179977801 -19652349 - MER113 DNA MER1_type? -42 479 33 357 372 64 0 chr5 179977908 179978064 -19652086 - L2 LINE L2 0 3272 3107 266 256 299 7 chr5 179978249 179978386 -19651764 + MIR SINE MIR 86 262 0 968 266 193 13 chr5 179978677 179979465 -19650685 - Charlie2 DNA MER1_type -75 2787 1858 1887 145 3 0 chr5 179979560 179979886 -19650264 + AluSx SINE Alu 1 327 0 1810 169 3 3 chr5 179980396 179980740 -19649410 - L1PB1 LINE L1 -1300 4846 4503 * 5436 136 56 17 chr5 179980738 179981007 -19649143 + L1PB1 LINE L1 4870 5127 -1024 2133 98 7 14 chr5 179981007 179981302 -19648848 + AluSc SINE Alu 6 298 -11 5436 136 56 17 chr5 179981302 179981501 -19648649 + L1PB1 LINE L1 5127 5317 -834 1895 109 4 0 chr5 179981501 179981757 -19648393 - AluSc SINE Alu -44 265 9 5436 136 56 17 chr5 179981757 179982185 -19647965 + L1PB1 LINE L1 5317 5727 -424 333 62 0 0 chr5 179982185 179982233 -19647917 + (CA)n Simple_repeat Simple_repeat 2 49 0 5436 136 56 17 chr5 179982233 179982588 -19647562 + L1PB1 LINE L1 5727 6148 -3 249 275 99 38 chr5 179983082 179983107 -19647043 + MIR SINE MIR 124 146 -116 1945 153 0 7 chr5 179983107 179983430 -19646720 + AluSx SINE Alu 1 312 0 249 275 99 38 chr5 179983430 179983535 -19646615 + MIR SINE MIR 146 262 0 912 140 7 14 chr5 179984320 179984463 -19645687 + AluSg/x SINE Alu 116 257 -55 590 168 138 36 chr5 179984647 179984814 -19645336 - MER53 DNA DNA -2 187 4 33 0 0 0 chr5 179985295 179985328 -19644822 + AT_rich Low_complexity Low_complexity 1 33 0 784 136 8 0 chr5 179985898 179986030 -19644120 - L1MA4A LINE L1 -5 6298 6166 2165 116 7 0 chr5 179986121 179986431 -19643719 - AluSx SINE Alu 0 312 1 342 241 146 29 chr5 179986648 179986785 -19643365 + MIR SINE MIR 12 164 -98 2099 104 7 7 chr5 179988575 179988882 -19641268 + AluSp SINE Alu 1 307 -6 1954 154 6 3 chr5 179988958 179989269 -19640881 + AluSx SINE Alu 1 312 0 880 143 61 7 chr5 179989283 179989430 -19640720 + AluJb SINE Alu 104 258 -54 514 97 0 21 chr5 179989436 179989529 -19640621 + (GGAA)n Simple_repeat Simple_repeat 4 94 0 285 341 61 27 chr5 179989777 179990073 -19640077 + L1MEd LINE L1 952 1257 -4862 507 294 133 52 chr5 179990212 179990985 -19639165 + L1MEd LINE L1 1415 2291 -3947 354 298 171 6 chr5 179991121 179991279 -19638871 + MIR SINE MIR 50 233 -29 324 348 15 22 chr5 179991702 179991837 -19638313 - L3 LINE CR1 -169 1408 1275 342 299 92 92 chr5 179992077 179992348 -19637802 - L2 LINE L2 -6 3266 2996 202 333 36 0 chr5 179992502 179992586 -19637564 - L3 LINE CR1 -557 1020 934 22 0 0 0 chr5 179992749 179992771 -19637379 + AT_rich Low_complexity Low_complexity 1 22 0 2172 114 0 3 chr5 179993046 179993345 -19636805 - AluSx SINE Alu -14 298 1 24 0 0 0 chr5 179994175 179994199 -19635951 + AT_rich Low_complexity Low_complexity 1 24 0 360 315 69 30 chr5 179996163 179996366 -19633784 - MIR SINE MIR 0 262 52 2051 125 0 0 chr5 179996438 179996733 -19633417 + AluSx SINE Alu 1 295 -17 307 227 45 11 chr5 179996761 179996849 -19633301 + L1MC4 LINE L1 6613 6703 -1339 2397 43 3 13 chr5 179996933 179997236 -19632914 - AluY SINE Alu -11 300 1 1941 162 21 24 chr5 179999634 180000010 -19630140 + THE1C LTR MaLR 1 375 0 353 321 45 28 chr5 180000102 180000389 -19629761 + L1M4 LINE L1 3797 4088 -2058 21 0 0 0 chr5 180000845 180000866 -19629284 + AT_rich Low_complexity Low_complexity 1 21 0 845 255 70 12 chr5 180001655 180001914 -19628236 - MER54A LTR ERVL -327 574 301 1999 96 18 7 chr5 180001975 180002280 -19627870 + AluSx SINE Alu 1 308 0 2187 87 3 39 chr5 180002560 180002870 -19627280 + AluSp SINE Alu 1 299 -14 341 341 24 0 chr5 180003854 180003980 -19626170 + L2 LINE L2 3168 3296 -17 194 306 65 19 chr5 180006998 180007106 -19623044 - MIR3 SINE MIR -26 182 70 351 0 0 0 chr5 180007242 180007281 -19622869 + (TG)n Simple_repeat Simple_repeat 1 39 0 255 234 57 48 chr5 180008192 180008316 -19621834 + L2 LINE L2 3120 3244 -69 201 282 82 18 chr5 180008335 180008445 -19621705 - MIR SINE MIR -62 200 84 2598 17 7 0 chr5 180008641 180008942 -19621208 + AluY SINE Alu 1 303 -8 282 301 84 21 chr5 180011368 180011607 -19618543 + HAL1b LINE L1 747 1000 -348 361 301 107 17 chr5 180011764 180012113 -19618037 + L1MC4a LINE L1 5550 5791 -330 682 282 116 24 chr5 180012519 180012899 -19617251 - L1ME3A LINE L1 -278 5892 5478 300 230 0 26 chr5 180012899 180013012 -19617138 + CT-rich Low_complexity Low_complexity 2 111 0 207 158 18 35 chr5 180013015 180013072 -19617078 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 24 0 0 0 chr5 180013491 180013515 -19616635 + AT_rich Low_complexity Low_complexity 1 24 0 300 27 0 0 chr5 180014247 180014284 -19615866 + (CA)n Simple_repeat Simple_repeat 2 38 0 213 39 0 0 chr5 180014292 180014318 -19615832 + (TA)n Simple_repeat Simple_repeat 1 26 0 209 159 23 0 chr5 180014505 180014549 -19615601 + CT-rich Low_complexity Low_complexity 2 46 0 1014 153 34 5 chr5 180015673 180015882 -19614268 - L1MA7 LINE L1 -1 6290 6076 468 0 0 0 chr5 180016676 180016728 -19613422 + (TG)n Simple_repeat Simple_repeat 2 53 0 1124 118 11 16 chr5 180016937 180017123 -19613027 + L1MA4 LINE L1 5673 5857 -443 24 0 0 0 chr5 180018242 180018266 -19611884 + AT_rich Low_complexity Low_complexity 1 24 0 196 369 160 28 chr5 180018956 180019238 -19610912 + L2 LINE L2 2046 2364 -950 225 411 23 16 chr5 180019475 180019604 -19610546 + L2 LINE L2 3141 3270 -2 1493 194 7 7 chr5 180019901 180020190 -19609960 - AluJb SINE Alu -18 294 6 1464 219 22 32 chr5 180020482 180020851 -19609299 - MLT1A1 LTR MaLR 0 365 1 502 321 66 20 chr5 180022247 180022443 -19607707 + MIR SINE MIR 28 232 -30 444 271 123 58 chr5 180023688 180024102 -19606048 + HAL1b LINE L1 295 735 -613 292 227 193 11 chr5 180024447 180024535 -19605615 + L1ME3A LINE L1 5962 6065 -105 23 0 0 0 chr5 180024660 180024683 -19605467 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 180025482 180025512 -19604638 + AT_rich Low_complexity Low_complexity 1 30 0 335 303 101 30 chr5 180026684 180026882 -19603268 + MIR SINE MIR 3 214 -48 724 203 0 0 chr5 180027381 180027514 -19602636 - FLAM_C SINE Alu -8 135 3 23 68 0 0 chr5 180028895 180028939 -19601211 + AT_rich Low_complexity Low_complexity 1 44 0 2488 50 0 0 chr5 180029723 180030020 -19600130 - AluY SINE Alu -14 297 1 254 147 73 44 chr5 180030222 180030290 -19599860 + HsTC2 DNA Tc2 15 84 -1814 24 0 0 0 chr5 180030331 180030355 -19599795 + AT_rich Low_complexity Low_complexity 1 24 0 233 208 64 16 chr5 180030367 180030492 -19599658 + (TA)n Simple_repeat Simple_repeat 1 131 0 4977 174 29 10 chr5 180031026 180032387 -19597763 + L1PA16 LINE L1 4768 6159 -7 219 351 182 12 chr5 180033176 180033341 -19596809 + MIR SINE MIR 57 249 -13 2266 103 0 3 chr5 180033549 180033851 -19596299 + AluSq SINE Alu 13 313 0 2246 120 0 0 chr5 180034959 180035268 -19594882 + AluSg SINE Alu 1 309 -1 730 271 12 29 chr5 180036189 180036433 -19593717 + L1MA9 LINE L1 6035 6274 -38 219 276 53 0 chr5 180036785 180036861 -19593289 - MIR SINE MIR -123 139 60 6562 150 33 30 chr5 180037454 180038645 -19591505 + Tigger3b DNA MER2_type 6 1202 -1826 17342 53 92 4 chr5 180038645 180041557 -19588593 + L1PA5 LINE L1 3169 6151 -3 6562 150 33 30 chr5 180041557 180041588 -19588562 + Tigger3b DNA MER2_type 1202 1231 0 5973 103 20 0 chr5 180041942 180043455 -19586695 + L1PA12 LINE L1 4628 6168 0 6719 56 45 0 chr5 180043630 180044488 -19585662 - MER11D LTR ERVK 0 897 1 27 0 0 0 chr5 180045214 180045241 -19584909 + AT_rich Low_complexity Low_complexity 1 27 0 2191 107 0 0 chr5 180045898 180046197 -19583953 + AluSx SINE Alu 1 299 -13 806 128 0 15 chr5 180046626 180046759 -19583391 - FLAM_C SINE Alu -2 131 1 16198 30 0 3 chr5 180049046 180051769 -19578381 - L1PA4 LINE L1 -3 6152 3436 13497 35 1 1 chr5 180051770 180053448 -19576702 + L1PA4 LINE L1 1760 3437 -2709 2104 129 3 3 chr5 180053917 180054227 -19575923 - AluSx SINE Alu -2 310 1 244 304 25 0 chr5 180054653 180054732 -19575418 - MIR SINE MIR -95 113 33 1841 132 15 0 chr5 180054794 180055066 -19575084 + AluSx SINE Alu 27 302 -10 1521 238 106 44 chr5 180056461 180057147 -19573003 - HsTC2a DNA Tc2 0 744 16 409 282 23 0 chr5 180057442 180057573 -19572577 - MER94 DNA DNA 0 134 1 241 279 29 100 chr5 180058531 180058563 -19571587 + L3 LINE CR1 1321 1354 -223 2347 74 0 32 chr5 180058563 180058873 -19571277 + AluSc SINE Alu 1 300 -9 241 279 29 100 chr5 180058873 180058980 -19571170 + L3 LINE CR1 1354 1450 -127 1048 286 113 29 chr5 180059084 180059641 -19570509 + Charlie7 DNA MER1_type 108 711 -1901 2190 58 0 15 chr5 180059642 180059916 -19570234 - AluY SINE Alu -10 301 32 1824 114 7 30 chr5 180059916 180060185 -19569965 - AluSq SINE Alu -48 265 1 865 282 73 76 chr5 180060218 180060345 -19569805 + Charlie7 DNA MER1_type 845 971 -1641 198 71 0 0 chr5 180060345 180060373 -19569777 + (TTA)n Simple_repeat Simple_repeat 1 28 0 2177 93 0 0 chr5 180060373 180060653 -19569497 - AluSx SINE Alu -32 280 1 865 282 73 76 chr5 180060653 180061006 -19569144 + Charlie7 DNA MER1_type 970 1326 -1286 180 0 0 0 chr5 180061006 180061026 -19569124 + (GA)n Simple_repeat Simple_repeat 1 20 0 865 282 73 76 chr5 180061026 180061135 -19569015 + Charlie7 DNA MER1_type 1326 1434 -1178 2493 17 7 0 chr5 180061469 180061759 -19568391 - L1PA4 LINE L1 0 6155 5864 22 0 0 0 chr5 180061766 180061788 -19568362 + AT_rich Low_complexity Low_complexity 1 22 0 2309 81 0 0 chr5 180061801 180062085 -19568065 + AluY SINE Alu 1 284 -27 388 0 0 0 chr5 180062085 180062128 -19568022 + (TAAA)n Simple_repeat Simple_repeat 2 112 0 2392 79 0 31 chr5 180062508 180062825 -19567325 + AluSp SINE Alu 7 313 0 21 57 0 0 chr5 180063299 180063334 -19566816 + AT_rich Low_complexity Low_complexity 1 35 0 237 180 0 0 chr5 180063568 180063618 -19566532 + T-rich Low_complexity Low_complexity 1 50 0 1240 270 67 0 chr5 180064043 180064384 -19565766 + MLT1G LTR MaLR 1 364 -226 * 2871 100 10 3 chr5 180064382 180064772 -19565378 - MER1A DNA MER1_type -19 510 118 800 242 124 10 chr5 180064768 180064999 -19565151 + MLT1G LTR MaLR 357 590 0 * 1274 164 22 25 chr5 180065808 180066083 -19564067 - L1MA7 LINE L1 0 6291 6018 2336 92 0 0 chr5 180066267 180066562 -19563588 - AluSg SINE Alu -15 295 1 413 318 136 33 chr5 180066785 180067226 -19562924 + L2 LINE L2 2607 3090 -223 189 147 0 0 chr5 180067392 180067426 -19562724 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 390 362 70 27 chr5 180067531 180067832 -19562318 - L2 LINE L2 -562 2752 2439 492 190 0 25 chr5 180067837 180067970 -19562180 + L1PA16 LINE L1 5704 5827 -339 2042 126 9 28 chr5 180068248 180068566 -19561584 + AluSq SINE Alu 1 312 -1 286 243 14 0 chr5 180069361 180069431 -19560719 - MLT1H LTR MaLR -7 542 472 438 246 244 51 chr5 180069462 180069811 -19560339 - MLT1H LTR MaLR -143 412 30 349 300 53 20 chr5 180074193 180074343 -19555807 - MLT1K LTR MaLR -1 587 433 229 312 21 54 chr5 180074530 180074623 -19555527 - MLT1K LTR MaLR -348 240 151 189 107 0 0 chr5 180075333 180075361 -19554789 + (A)n Simple_repeat Simple_repeat 1 28 0 23 78 0 0 chr5 180075865 180075916 -19554234 + AT_rich Low_complexity Low_complexity 1 51 0 2217 113 0 0 chr5 180076184 180076484 -19553666 - AluSq SINE Alu -13 300 1 5362 58 1 0 chr5 180077400 180078077 -19552073 - L1PA7 LINE L1 -11 6143 5466 210 322 87 26 chr5 180083146 180083261 -19546889 - L2 LINE L2 -49 3223 3102 307 278 33 11 chr5 180083478 180083568 -19546582 + L1MC4 LINE L1 6617 6708 -1334 2068 124 21 0 chr5 180084768 180085059 -19545091 - AluSx SINE Alu -13 299 3 1385 227 60 40 chr5 180085349 180085803 -19544347 - MLT1C LTR MaLR 0 467 5 2088 109 3 7 chr5 180085979 180086294 -19543856 - AluSq SINE Alu 0 314 1 183 182 0 0 chr5 180086916 180086949 -19543201 - L2 LINE L2 -2 3311 3279 294 329 153 68 chr5 180086992 180087417 -19542733 - L2 LINE L2 -5 3267 2807 211 61 30 61 chr5 180087438 180087504 -19542646 + (TTTA)n Simple_repeat Simple_repeat 1 64 0 1606 127 0 4 chr5 180087514 180087751 -19542399 - AluSg/x SINE Alu -1 311 76 244 354 130 14 chr5 180087756 180087971 -19542179 - L2 LINE L2 -540 2774 2535 273 288 0 0 chr5 180088052 180088125 -19542025 - L2 LINE L2 -1017 2297 2225 428 345 45 10 chr5 180088592 180088792 -19541358 - L2 LINE L2 -203 3069 2863 399 21 0 0 chr5 180089606 180089654 -19540496 + (TG)n Simple_repeat Simple_repeat 2 49 0 34 42 0 0 chr5 180090124 180090172 -19539978 + AT_rich Low_complexity Low_complexity 1 48 0 414 0 0 0 chr5 180091541 180091587 -19538563 + (CA)n Simple_repeat Simple_repeat 2 47 0 2182 122 3 0 chr5 180092374 180092668 -19537482 - AluSc SINE Alu -14 295 1 1873 142 7 3 chr5 180093944 180094253 -19535897 + L1MC1 LINE L1 6015 6324 -9 200 319 25 76 chr5 180094400 180094557 -19535593 + L2 LINE L2 2935 3083 -189 20733 34 4 2 chr5 180095075 180097749 -19532401 + L1P2 LINE L1 2838 5518 -637 193 233 25 141 chr5 180098050 180098213 -19531937 - L2 LINE L2 -250 3063 2920 227 321 107 30 chr5 180098848 180098979 -19531171 - L2 LINE L2 -15 3257 3117 290 323 124 32 chr5 180100611 180100828 -19529322 - MIR SINE MIR -24 238 2 210 339 81 24 chr5 180100907 180101031 -19529119 + MIR SINE MIR 70 200 -62 290 306 103 12 chr5 180102086 180102338 -19527812 - L1ME LINE L1 -299 5871 5597 607 286 32 5 chr5 180102515 180102704 -19527446 + L2 LINE L2 2612 2805 -509 23 0 0 0 chr5 180103103 180103126 -19527024 + AT_rich Low_complexity Low_complexity 1 23 0 1043 212 19 22 chr5 180104420 180104736 -19525414 + MER33 DNA MER1_type 9 323 -1 21 0 0 0 chr5 180104741 180104762 -19525388 + AT_rich Low_complexity Low_complexity 1 21 0 1374 222 73 6 chr5 180105142 180105484 -19524666 - MLT1A1 LTR MaLR 0 365 1 5160 225 142 44 chr5 180105484 180106354 -19523796 - MLT1A1-int LTR MaLR 0 1735 952 266 0 29 0 chr5 180106354 180106388 -19523762 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1939 136 3 27 chr5 180106391 180106686 -19523464 - AluSx SINE Alu -24 288 1 5160 225 142 44 chr5 180106686 180107391 -19522759 - MLT1A1-int LTR MaLR -784 951 1 1610 232 31 0 chr5 180107391 180107745 -19522405 - MLT1A1 LTR MaLR 0 365 1 640 260 36 100 chr5 180108198 180108448 -19521702 - MIR SINE MIR -23 239 6 255 125 0 0 chr5 180108492 180108532 -19521618 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1568 152 45 103 chr5 180109293 180109689 -19520461 + THE1C LTR MaLR 1 373 -2 271 234 279 0 chr5 180110411 180110522 -19519628 + MIR SINE MIR 121 262 0 319 295 48 0 chr5 180110551 180110656 -19519494 + MIR SINE MIR 125 234 -28 618 283 50 0 chr5 180110858 180111056 -19519094 - L2 LINE L2 -1156 2158 1951 301 342 51 0 chr5 180112232 180112349 -19517801 + MIR SINE MIR 119 241 -21 184 308 0 0 chr5 180113230 180113282 -19516868 - MER5B DNA MER1_type -114 64 13 930 202 11 5 chr5 180113635 180113823 -19516327 - MER5A DNA MER1_type 0 189 1 1431 219 59 8 chr5 180217647 180218003 -19412147 + MLT1B LTR MaLR 1 374 -16 310 267 54 74 chr5 180219176 180219482 -19410668 + L1MC5 LINE L1 7310 7810 -151 460 236 86 52 chr5 180219831 180220064 -19410086 + Charlie8 DNA MER1_type 10 250 -2167 383 270 71 8 chr5 180220387 180220513 -19409637 + MIR SINE MIR 103 236 -26 636 268 149 87 chr5 180220695 180221420 -19408730 + LTR41 LTR ERVL 1 770 -3 390 325 38 31 chr5 180221624 180221784 -19408366 + MLT1K LTR MaLR 138 298 -290 2197 98 3 38 chr5 180221855 180222171 -19407979 - AluSx SINE Alu -7 305 1 2099 275 92 19 chr5 180223081 180224313 -19405837 - L1ME2 LINE L1 -30 6134 4801 2297 57 4 0 chr5 180225063 180225378 -19404772 + AluY SINE Alu 1 316 0 478 288 8 0 chr5 180225509 180225634 -19404516 - MIR SINE MIR -13 249 124 288 350 45 34 chr5 180228239 180228416 -19401734 + L2 LINE L2 2879 3057 -256 383 0 21 0 chr5 180228472 180228519 -19401631 + (TG)n Simple_repeat Simple_repeat 1 48 0 472 280 67 20 chr5 180228607 180228757 -19401393 - MIR SINE MIR 0 262 106 180 0 0 0 chr5 180228962 180228982 -19401168 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2085 86 4 11 chr5 180228986 180229265 -19400885 - AluY SINE Alu -34 277 1 657 227 0 0 chr5 180229348 180229480 -19400670 - FLAM_A SINE Alu -7 135 4 31 0 0 0 chr5 180230410 180230441 -19399709 + AT_rich Low_complexity Low_complexity 1 31 0 1125 162 20 10 chr5 180230477 180230681 -19399469 - MER2 DNA MER2_type -139 206 1 312 255 104 0 chr5 180230813 180230919 -19399231 - MER103 DNA DNA -1 165 49 239 133 22 0 chr5 180231099 180231144 -19399006 + (TTA)n Simple_repeat Simple_repeat 3 48 0 198 337 0 34 chr5 180231222 180231311 -19398839 + MER5A DNA MER1_type 81 166 -23 341 152 0 0 chr5 180233987 180234050 -19396100 - Alu SINE Alu -257 46 1 2494 154 26 2 chr5 180234410 180234826 -19395324 + MSTB LTR MaLR 1 426 0 2013 144 45 25 chr5 180234967 180235322 -19394828 - THE1B LTR MaLR -2 362 1 239 190 17 0 chr5 180235347 180235405 -19394745 + (TA)n Simple_repeat Simple_repeat 1 59 0 1611 177 29 23 chr5 180236582 180236892 -19393258 - AluJb SINE Alu 0 312 1 2195 121 3 3 chr5 180236997 180237343 -19392807 + AluSp SINE Alu 1 346 0 251 267 70 0 chr5 180237434 180237520 -19392630 + MIR SINE MIR 101 192 -70 4003 139 44 7 chr5 180237670 180238352 -19391798 - Tigger2 DNA MER2_type 0 2718 2012 1654 164 0 50 chr5 180238454 180238752 -19391398 - AluJb SINE Alu -29 283 1 6667 137 45 4 chr5 180238752 180239856 -19390294 - Tigger2 DNA MER2_type -1568 1150 1 2126 153 28 0 chr5 180239874 180240228 -19389922 - THE1B LTR MaLR 0 364 1 457 303 18 18 chr5 180240255 180240420 -19389730 - MIR SINE MIR -15 247 83 28 0 0 0 chr5 180240712 180240740 -19389410 + AT_rich Low_complexity Low_complexity 1 28 0 312 229 14 0 chr5 180240741 180240811 -19389339 - MIR SINE MIR -6 256 186 194 105 26 0 chr5 180242140 180242178 -19387972 + A-rich Low_complexity Low_complexity 4 42 0 1461 185 11 17 chr5 180242225 180242512 -19387638 + AluSx SINE Alu 1 285 -27 240 35 0 0 chr5 180242512 180242541 -19387609 + (CA)n Simple_repeat Simple_repeat 2 30 0 270 392 39 0 chr5 180243014 180243095 -19387055 + MER5A DNA MER1_type 55 144 -45 194 81 27 0 chr5 180243095 180243132 -19387018 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 270 392 39 0 chr5 180243132 180243180 -19386970 + MER5A DNA MER1_type 144 189 0 294 269 67 10 chr5 180244113 180244217 -19385933 + MIR SINE MIR 32 141 -121 21 57 0 0 chr5 180245843 180245878 -19384272 + AT_rich Low_complexity Low_complexity 1 35 0 1647 188 34 36 chr5 180246441 180246829 -19383321 + L1MB8 LINE L1 5783 6169 -9 26 30 0 0 chr5 180247212 180247245 -19382905 + AT_rich Low_complexity Low_complexity 1 33 0 879 151 50 0 chr5 180248051 180248230 -19381920 + L1MA8 LINE L1 6096 6283 -8 2332 88 0 3 chr5 180248271 180248577 -19381573 + AluY SINE Alu 1 305 -6 2447 141 3 0 chr5 180248896 180249259 -19380891 + THE1B LTR MaLR 1 364 0 7609 125 48 48 chr5 180249259 180250578 -19379572 + THE1B-int LTR MaLR 1 1320 -260 22 0 0 0 chr5 180250580 180250602 -19379548 + AT_rich Low_complexity Low_complexity 1 22 0 2650 133 52 11 chr5 180250737 180251195 -19378955 + L1MB1 LINE L1 5690 6166 -2 2356 105 38 3 chr5 180251229 180251572 -19378578 + THE1A LTR MaLR 1 355 0 10830 112 16 2 chr5 180251572 180253130 -19377020 + THE1A-int LTR MaLR 1 1580 0 2571 80 14 6 chr5 180253130 180253482 -19376668 + THE1A LTR MaLR 1 355 0 785 171 71 18 chr5 180253905 180254075 -19376075 + MER53 DNA DNA 11 189 0 207 0 0 0 chr5 180254317 180254340 -19375810 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1808 146 0 7 chr5 180254447 180254728 -19375422 - AluSx SINE Alu -10 302 24 25 51 0 0 chr5 180254869 180254908 -19375242 + AT_rich Low_complexity Low_complexity 1 39 0 227 118 11 75 chr5 180255004 180255097 -19375053 + (TTTA)n Simple_repeat Simple_repeat 1 87 0 372 59 0 0 chr5 180256742 180256793 -19373357 + (CA)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr5 180256949 180256971 -19373179 + AT_rich Low_complexity Low_complexity 1 22 0 850 189 5 66 chr5 180257618 180257814 -19372336 - MER20 DNA MER1_type 0 219 36 366 278 63 37 chr5 180258017 180258208 -19371942 + MLT1K LTR MaLR 391 586 -2 929 164 31 0 chr5 180260796 180260955 -19369195 + MER20 DNA MER1_type 56 219 0 335 316 178 7 chr5 180261474 180261626 -19368524 - MER5A DNA MER1_type -3 186 9 2332 90 0 10 chr5 180262551 180262851 -19367299 + AluSx SINE Alu 1 297 -15 1725 138 0 72 chr5 180264468 180264772 -19365378 - AluSx SINE Alu -30 282 1 291 54 0 0 chr5 180264962 180264999 -19365151 + (TG)n Simple_repeat Simple_repeat 2 38 0 302 212 73 58 chr5 180265002 180265139 -19365011 - L1MCa LINE L1 -4326 2100 1962 29 0 0 0 chr5 180266427 180266456 -19363694 + AT_rich Low_complexity Low_complexity 1 29 0 7389 27 1 17 chr5 180267174 180268305 -19361845 + L1PA4 LINE L1 5040 6155 0 657 285 46 49 chr5 180271638 180271943 -19358207 + L1M4b LINE L1 11 314 -6545 1820 260 84 52 chr5 180272301 180273578 -19356572 + L1M4b LINE L1 1089 2418 -4541 525 289 29 69 chr5 180273839 180274085 -19356065 + L2 LINE L2 2851 3086 -227 1367 274 65 48 chr5 180274698 180275279 -19354871 + L1PA12 LINE L1 50 640 -6941 1403 215 63 9 chr5 180275419 180275687 -19354463 + L1PA12 LINE L1 3318 3609 -3975 1906 126 0 0 chr5 180275687 180275964 -19354186 + AluSg SINE Alu 34 310 0 1403 215 63 9 chr5 180275964 180276030 -19354120 + L1PA12 LINE L1 3609 3670 -3914 266 130 0 0 chr5 180276030 180276076 -19354074 + AluSc SINE Alu 254 299 0 16110 152 11 13 chr5 180276080 180276751 -19353399 + L1P LINE L1 2163 2834 -3312 2200 97 3 0 chr5 180276751 180277049 -19353101 + AluY SINE Alu 1 299 -12 16110 152 11 13 chr5 180277049 180279302 -19350848 + L1P LINE L1 2834 5080 -1066 445 292 96 44 chr5 180279710 180280138 -19350012 - L1MC5 LINE L1 -141 7820 7371 706 255 36 5 chr5 180280143 180280335 -19349815 + L2 LINE L2 1825 2022 -1292 313 288 136 30 chr5 180281185 180281317 -19348833 - MLT1L LTR MaLR -161 454 309 1739 178 0 0 chr5 180283221 180283508 -19346642 - AluSx SINE Alu -18 294 8 181 310 155 0 chr5 180283905 180283963 -19346187 + L2 LINE L2 3168 3234 -38 1441 67 22 202 chr5 180284345 180284716 -19345434 - AluYb8 SINE Alu -4 304 1 21 0 0 0 chr5 180284888 180284909 -19345241 + AT_rich Low_complexity Low_complexity 1 21 0 528 258 37 74 chr5 180285745 180285989 -19344161 + L2 LINE L2 3079 3313 0 253 258 0 15 chr5 180286611 180286677 -19343473 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 2251 85 0 19 chr5 180287098 180287415 -19342735 + AluY SINE Alu 1 311 0 189 0 0 0 chr5 180287608 180287629 -19342521 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 564 310 185 48 chr5 180287696 180288280 -19341870 + L2 LINE L2 2286 2949 -365 751 169 0 34 chr5 180288654 180288802 -19341348 - FLAM_C SINE Alu 0 143 1 491 116 0 0 chr5 180288891 180288960 -19341190 + MSTC LTR MaLR 5 73 -355 198 0 0 0 chr5 180288973 180288995 -19341155 + (T)n Simple_repeat Simple_repeat 1 22 0 2041 269 66 21 chr5 180289405 180290589 -19339561 + L1MDb LINE L1 771 2031 -4375 1335 262 74 43 chr5 180290650 180291536 -19338614 + L1MDb LINE L1 2147 3071 -3335 320 349 63 60 chr5 180291582 180291665 -19338485 + L2 LINE L2 2981 3062 -251 2482 48 3 16 chr5 180291665 180291980 -19338170 - AluY SINE Alu 0 311 1 320 349 63 60 chr5 180291980 180292041 -19338109 + L2 LINE L2 3062 3121 -192 1851 174 54 23 chr5 180292041 180292432 -19337718 + MER57A LTR ERV1 1 403 0 320 349 63 60 chr5 180292432 180292618 -19337532 + L2 LINE L2 3121 3313 0 2025 173 61 27 chr5 180292741 180293185 -19336965 + LTR2B LTR ERV1 32 490 0 25 0 0 0 chr5 180294306 180294331 -19335819 + AT_rich Low_complexity Low_complexity 1 25 0 724 216 142 0 chr5 180294404 180294566 -19335584 + MER5A DNA MER1_type 1 185 -4 363 306 51 19 chr5 180295106 180295263 -19334887 + MER5B DNA MER1_type 11 172 -6 408 316 90 23 chr5 180295340 180295596 -19334554 + L1MEd LINE L1 823 1095 -5024 2015 133 0 19 chr5 180295614 180295923 -19334227 + AluSc SINE Alu 1 303 -6 203 352 0 0 chr5 180295946 180296037 -19334113 + GA-rich Low_complexity Low_complexity 2 92 0 1326 243 27 62 chr5 180296060 180296464 -19333686 + MLT1B LTR MaLR 1 390 0 231 272 146 19 chr5 180297283 180297386 -19332764 - L2 LINE L2 -1 3271 3156 729 274 30 0 chr5 180297752 180297953 -19332197 + L2 LINE L2 2348 2554 -760 1839 173 58 22 chr5 180297958 180298358 -19331792 + MLT1C LTR MaLR 1 414 -53 335 231 51 0 chr5 180298358 180298436 -19331714 + MER81 DNA DNA 33 114 0 574 340 13 61 chr5 180298436 180298812 -19331338 + L2 LINE L2 2892 3249 -64 414 304 227 5 chr5 180299565 180299759 -19330391 + MIR SINE MIR 16 252 -10 189 0 0 0 chr5 180301083 180301104 -19329046 + (A)n Simple_repeat Simple_repeat 1 21 0 223 337 84 84 chr5 180301207 180301709 -19328441 - L2 LINE L2 -1 3312 2811 2182 86 34 0 chr5 180301940 180302231 -19327919 + AluY SINE Alu 2 302 -9 362 288 101 54 chr5 180302351 180302629 -19327521 + LTR33 LTR ERVL 91 381 -140 313 326 61 33 chr5 180302699 180302880 -19327270 + L2 LINE L2 3122 3307 -6 22 0 0 0 chr5 180303952 180303974 -19326176 + AT_rich Low_complexity Low_complexity 1 22 0 379 277 10 10 chr5 180304310 180304411 -19325739 + MER5B DNA MER1_type 9 109 -69 210 222 0 0 chr5 180304419 180304473 -19325677 + (TA)n Simple_repeat Simple_repeat 1 54 0 297 0 0 0 chr5 180304533 180304566 -19325584 + (CA)n Simple_repeat Simple_repeat 2 34 0 230 245 0 0 chr5 180304566 180304615 -19325535 + MER5B DNA MER1_type 128 176 -2 324 0 0 0 chr5 180306551 180306587 -19323563 + (CA)n Simple_repeat Simple_repeat 1 36 0 265 229 42 144 chr5 180307775 180307893 -19322257 - L3 LINE CR1 -2 1575 1470 335 286 25 8 chr5 180308355 180308474 -19321676 + CT-rich Low_complexity Low_complexity 4 124 0 2075 120 0 7 chr5 180308552 180308852 -19321298 + AluSx SINE Alu 1 298 -14 434 274 172 5 chr5 180308853 180309068 -19321082 + MLT1F LTR MaLR 286 536 -6 319 288 216 0 chr5 180309543 180309654 -19320496 - MER5A DNA MER1_type 0 189 55 494 346 65 57 chr5 180310309 180310810 -19319340 + L2 LINE L2 2760 3272 0 1904 75 4 60 chr5 180312208 180312489 -19317661 - AluY SINE Alu -12 299 35 226 273 87 50 chr5 180313151 180313312 -19316838 + L1MEd LINE L1 210 376 -5829 548 316 30 51 chr5 180314200 180314535 -19315615 + L3 LINE CR1 626 953 -624 679 233 14 7 chr5 180314563 180314709 -19315441 + FRAM SINE Alu 1 146 -30 341 314 7 22 chr5 180315204 180315341 -19314809 + MLT1K LTR MaLR 447 581 -7 317 311 45 0 chr5 180316215 180316392 -19313758 - L1M4 LINE L1 -1877 4269 4085 3879 273 72 25 chr5 180316425 180318476 -19311674 + L1MEd LINE L1 2069 4173 -2042 1919 125 19 3 chr5 180318477 180318789 -19311361 - L1PA14 LINE L1 0 6161 5845 611 258 15 95 chr5 180319559 180319885 -19310265 + MER46C DNA MER2_type 1 300 -38 1623 167 13 31 chr5 180320140 180320457 -19309693 - AluSx SINE Alu -1 311 1 908 192 32 93 chr5 180320653 180320757 -19309393 - MER33 DNA MER1_type -2262 323 214 2123 122 10 0 chr5 180320757 180321061 -19309089 + AluSx SINE Alu 1 307 -5 908 192 32 93 chr5 180321061 180321300 -19308850 - MER33 DNA MER1_type -2371 214 1 734 288 55 42 chr5 180321318 180321718 -19308432 - Charlie8 DNA MER1_type -1928 489 85 292 287 128 31 chr5 180322859 180323054 -19307096 - MLT1L LTR MaLR -33 582 369 22 0 0 0 chr5 180323380 180323402 -19306748 + AT_rich Low_complexity Low_complexity 1 22 0 1085 196 188 3 chr5 180323451 180323801 -19306349 + MLT2C2 LTR ERVL 1 412 -52 293 243 0 0 chr5 180324161 180324231 -19305919 + MIR SINE MIR 183 252 -10 393 325 25 0 chr5 180325661 180325781 -19304369 + MIR SINE MIR 1 123 -139 788 126 0 22 chr5 180325782 180325798 -19304352 - L1MC1 LINE L1 -263 6070 6055 13509 144 36 15 chr5 180325798 180328165 -19301985 - Tigger1 DNA MER2_type 0 2418 1 788 126 0 22 chr5 180328165 180328283 -19301867 - L1MC1 LINE L1 -278 6055 5939 262 312 11 21 chr5 180328773 180328866 -19301284 + MIR3 SINE MIR 111 202 -6 393 333 31 16 chr5 180329078 180329270 -19300880 + MLT1K LTR MaLR 150 344 -244 660 272 31 10 chr5 180329973 180330168 -19299982 + L1MC4a LINE L1 6629 6827 -981 2313 187 42 17 chr5 180330176 180333594 -19296556 + L1PA5 LINE L1 6 3336 -3534 2210 136 0 0 chr5 180333594 180333904 -19296246 + AluSx SINE Alu 1 310 -2 2313 187 42 17 chr5 180333904 180333924 -19296226 + L1PA5 LINE L1 3336 3354 -3516 2313 64 13 3 chr5 180333924 180334235 -19295915 + L1PA5 LINE L1 6557 6870 0 2313 187 42 17 chr5 180334235 180336975 -19293175 + L1PA5 LINE L1 3354 6870 0 291 157 0 0 chr5 180336989 180337040 -19293110 + (TA)n Simple_repeat Simple_repeat 1 51 0 333 253 11 11 chr5 180337040 180337127 -19293023 - L1MC4 LINE L1 -1341 6701 6615 2138 141 6 3 chr5 180337127 180337488 -19292662 + L1PB1 LINE L1 5782 6143 -8 414 228 20 0 chr5 180337668 180337769 -19292381 + L1MC5 LINE L1 6982 7084 -877 226 71 0 0 chr5 180337801 180337843 -19292307 - LTR66 LTR ERVL -171 439 398 242 167 0 37 chr5 180337851 180337905 -19292245 - L1MC4 LINE L1 -1339 6703 6652 284 224 26 0 chr5 180337905 180337981 -19292169 - L1MC4 LINE L1 -1339 6703 6626 204 40 0 0 chr5 180337981 180338006 -19292144 + (CA)n Simple_repeat Simple_repeat 2 26 0 593 228 50 22 chr5 180338033 180338213 -19291937 + L1MC5 LINE L1 7154 7338 -623 388 148 0 0 chr5 180338252 180338313 -19291837 + MER3 DNA MER1_type 148 208 -1 761 234 113 36 chr5 180338314 180338728 -19291422 + L1MC5 LINE L1 7333 7778 -183 1036 143 0 13 chr5 180338728 180338882 -19291268 + FRAM SINE Alu 1 150 -26 32 0 0 0 chr5 180338885 180338917 -19291233 + AT_rich Low_complexity Low_complexity 1 32 0 1723 154 0 18 chr5 180339111 180339396 -19290754 - AluJb SINE Alu -32 280 1 2158 117 0 3 chr5 180340315 180340613 -19289537 + AluSc SINE Alu 1 297 -12 243 0 0 0 chr5 180340688 180340715 -19289435 + (CA)n Simple_repeat Simple_repeat 2 28 0 1169 244 63 38 chr5 180341563 180341711 -19288439 - MSTD LTR MaLR -20 376 233 315 0 0 0 chr5 180341711 180341746 -19288404 + (TG)n Simple_repeat Simple_repeat 1 35 0 1169 244 63 38 chr5 180341746 180341962 -19288188 - MSTD LTR MaLR -163 233 3 267 364 64 40 chr5 180342056 180342383 -19287767 - L2 LINE L2 -448 2866 2532 415 174 0 0 chr5 180343313 180343382 -19286768 - MER46C DNA MER2_type -9 329 261 301 259 129 36 chr5 180343408 180343547 -19286603 - MER46C DNA MER2_type -150 188 37 386 357 43 22 chr5 180345602 180345787 -19284363 - L2 LINE L2 -9 3263 3075 270 208 52 13 chr5 180347120 180347197 -19282953 - MLT1K LTR MaLR -2 586 507 180 125 0 0 chr5 180347525 180347557 -19282593 + (TA)n Simple_repeat Simple_repeat 1 32 0 3096 55 0 0 chr5 180347565 180347950 -19282200 + L1PA5 LINE L1 5762 6146 -8 48 67 0 0 chr5 180347956 180348046 -19282104 + AT_rich Low_complexity Low_complexity 1 90 0 23 33 0 0 chr5 180348916 180348946 -19281204 + AT_rich Low_complexity Low_complexity 1 30 0 183 313 0 0 chr5 180349083 180349131 -19281019 - L2 LINE L2 -16 3297 3250 807 310 125 6 chr5 180349168 180349520 -19280630 - L2 LINE L2 0 3313 2920 606 322 49 25 chr5 180349573 180349818 -19280332 + MIR SINE MIR 12 262 0 424 233 54 23 chr5 180350793 180350922 -19279228 - MIR SINE MIR -79 183 51 703 311 46 46 chr5 180351241 180351633 -19278517 + L2 LINE L2 2922 3313 0 258 81 0 0 chr5 180351733 180351770 -19278380 + (CA)n Simple_repeat Simple_repeat 2 38 0 190 306 92 81 chr5 180352573 180352834 -19277316 - L2 LINE L2 -202 3070 2807 324 155 0 0 chr5 180352928 180352999 -19277151 + (TG)n Simple_repeat Simple_repeat 2 72 0 791 253 12 6 chr5 180353445 180353615 -19276535 - MER45A DNA AcHobo -6 172 2 1083 127 0 33 chr5 180353633 180353814 -19276336 - THE1C LTR MaLR -200 175 1 414 258 26 45 chr5 180354028 180354183 -19275967 + MLT1L LTR MaLR 462 613 -2 567 200 40 0 chr5 180355561 180355686 -19274464 - L1M2 LINE L1 -520 5771 5642 25 0 0 0 chr5 180355686 180355711 -19274439 + AT_rich Low_complexity Low_complexity 1 25 0 554 195 113 67 chr5 180355830 180356025 -19274125 - LTR16A1 LTR ERVL 0 457 254 249 326 83 15 chr5 180356702 180356834 -19273316 + L2 LINE L2 2914 3054 -218 779 305 133 44 chr5 180356879 180357412 -19272738 - L2 LINE L2 0 3313 2724 283 316 86 17 chr5 180357676 180357850 -19272300 + LTR16A1 LTR ERVL 81 266 -191 388 284 161 50 chr5 180359480 180359643 -19270507 - L1ME4a LINE L1 -11 6110 5966 2022 133 26 0 chr5 180359643 180359945 -19270205 + AluSx SINE Alu 1 310 -2 388 284 161 50 chr5 180359945 180360117 -19270033 - L1ME4a LINE L1 -155 5966 5814 2159 90 20 3 chr5 180360117 180360416 -19269734 - AluY SINE Alu -7 304 1 388 284 161 50 chr5 180360416 180360576 -19269574 - L1ME4a LINE L1 -307 5814 5559 1775 246 109 47 chr5 180360767 180361700 -19268450 - L1ME4a LINE L1 -1117 5029 4039 674 223 117 46 chr5 180361716 180362066 -19268084 - L1ME4a LINE L1 -2251 3895 3521 2286 97 0 3 chr5 180362347 180362647 -19267503 - AluSq SINE Alu -10 303 5 24 0 0 0 chr5 180363056 180363080 -19267070 + AT_rich Low_complexity Low_complexity 1 24 0 1834 254 26 46 chr5 180366922 180367509 -19262641 - MLT1E2 LTR MaLR 0 626 52 1709 118 265 21 chr5 180367535 180367875 -19262275 - MSTA LTR MaLR 0 428 6 2098 125 10 0 chr5 180368438 180368714 -19261436 + AluSp SINE Alu 4 285 -28 234 0 0 0 chr5 180368714 180368740 -19261410 + (CA)n Simple_repeat Simple_repeat 1 26 0 2098 125 10 0 chr5 180368740 180368758 -19261392 + AluSp SINE Alu 285 301 -12 263 237 34 0 chr5 180369452 180369511 -19260639 + MER81 DNA DNA 50 110 -4 2242 121 48 22 chr5 180369511 180369866 -19260284 + THE1B LTR MaLR 1 364 0 1259 147 43 5 chr5 180371315 180371526 -19258624 - MER20 DNA MER1_type 0 219 1 921 228 5 16 chr5 180372154 180372338 -19257812 + MER5A DNA MER1_type 1 182 -7 230 309 151 0 chr5 180373108 180373234 -19256916 - L2 LINE L2 -1 3312 3168 496 356 171 3 chr5 180374117 180374468 -19255682 + L2 LINE L2 2393 2802 -512 227 327 82 27 chr5 180374452 180374562 -19255588 - MIR SINE MIR -84 178 63 * 293 231 77 33 chr5 180374897 180374988 -19255162 + MIR SINE MIR 67 161 -101 2121 117 0 10 chr5 180374990 180375297 -19254853 + AluSc SINE Alu 1 304 -5 2139 240 105 31 chr5 180375638 180376255 -19253895 - MLT2F LTR ERVL 0 663 1 5432 254 63 17 chr5 180376256 180377816 -19252334 - ERVL-F LTR ERVL -9 5755 4124 1588 272 114 13 chr5 180377816 180378265 -19251885 - MLT2F LTR ERVL -165 498 5 328 351 12 41 chr5 180378342 180378513 -19251637 + MIR3 SINE MIR 11 176 -32 536 336 58 0 chr5 180378537 180378745 -19251405 + MIR SINE MIR 38 257 -5 380 215 50 58 chr5 180379446 180379567 -19250583 - MLT1K LTR MaLR -57 531 412 939 207 0 0 chr5 180379813 180379982 -19250168 - MLT1B LTR MaLR 0 390 222 301 346 59 52 chr5 180380331 180380718 -19249432 - L2 LINE L2 -709 2605 2216 301 285 70 104 chr5 180381206 180381504 -19248646 + L2 LINE L2 2985 3272 0 189 291 282 0 chr5 180382107 180382210 -19247940 - MIR SINE MIR -89 173 42 206 146 0 36 chr5 180382341 180382396 -19247754 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 180 0 0 0 chr5 180383968 180383988 -19246162 + (TA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr5 180384288 180384309 -19245841 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 180384701 180384725 -19245425 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 180385536 180385557 -19244593 + AT_rich Low_complexity Low_complexity 1 21 0 302 342 136 55 chr5 180386347 180386604 -19243546 - L2 LINE L2 0 3272 2995 252 314 97 32 chr5 180386692 180386816 -19243334 - L2 LINE L2 -5 3267 3136 536 313 170 5 chr5 180386833 180387057 -19243093 - MIR SINE MIR 0 262 2 789 301 52 42 chr5 180387171 180387653 -19242497 + LTR16C LTR ERVL 4 490 -1 433 263 11 0 chr5 180387916 180388011 -19242139 - MIR3 SINE MIR -27 181 86 180 0 0 0 chr5 180389293 180389313 -19240837 + (A)n Simple_repeat Simple_repeat 1 20 0 224 213 16 0 chr5 180389904 180389965 -19240185 + CT-rich Low_complexity Low_complexity 3 64 0 983 136 0 6 chr5 180389965 180390141 -19240009 + (TTCC)n Simple_repeat Simple_repeat 3 177 0 815 283 18 9 chr5 180390190 180390409 -19239741 - MER58A DNA MER1_type -2 222 2 34 42 0 0 chr5 180390516 180390564 -19239586 + AT_rich Low_complexity Low_complexity 1 48 0 220 264 55 27 chr5 180390597 180390707 -19239443 - MIR SINE MIR -27 235 123 1132 45 0 0 chr5 180390858 180390990 -19239160 + AluY SINE Alu 1 132 -179 225 0 0 0 chr5 180390990 180391015 -19239135 + (A)n Simple_repeat Simple_repeat 1 25 0 508 207 0 85 chr5 180391213 180391377 -19238773 - L1MA7 LINE L1 -1 6290 6141 233 314 40 51 chr5 180391382 180391557 -19238593 + MER20B DNA MER1_type 7 179 -604 789 278 45 74 chr5 180391637 180392058 -19238092 + MLT1L LTR MaLR 1 409 -206 248 0 31 0 chr5 180392863 180392895 -19237255 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2106 101 29 0 chr5 180392904 180393182 -19236968 - AluSq SINE Alu -27 286 1 213 39 0 0 chr5 180394382 180394408 -19235742 + (TTG)n Simple_repeat Simple_repeat 2 27 0 253 342 10 67 chr5 180394472 180394665 -19235485 + MER5A DNA MER1_type 8 189 0 28 0 0 0 chr5 180395105 180395133 -19235017 + AT_rich Low_complexity Low_complexity 1 28 0 318 354 105 5 chr5 180396938 180397147 -19233003 - MIR SINE MIR -8 254 25 24 32 0 0 chr5 180397627 180397658 -19232492 + AT_rich Low_complexity Low_complexity 1 31 0 21 89 0 0 chr5 180397891 180397947 -19232203 + AT_rich Low_complexity Low_complexity 1 56 0 207 0 0 0 chr5 180398520 180398543 -19231607 + (A)n Simple_repeat Simple_repeat 1 23 0 328 310 15 26 chr5 180398557 180398721 -19231429 + MIR3 SINE MIR 39 201 -7 381 351 118 31 chr5 180400040 180400464 -19229686 - L2 LINE L2 -47 3266 2806 231 386 9 35 chr5 180400526 180400640 -19229510 + L2 LINE L2 3143 3253 -19 1830 157 40 0 chr5 180400670 180400789 -19229361 + AluJb SINE Alu 1 114 -198 198 0 0 0 chr5 180400789 180400811 -19229339 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 1830 157 40 0 chr5 180400811 180400991 -19229159 + AluJb SINE Alu 114 312 0 248 217 142 50 chr5 180401275 180401395 -19228755 + MLT1L LTR MaLR 306 436 -179 2286 111 0 9 chr5 180401983 180402298 -19227852 - AluSx SINE Alu 0 312 1 367 255 47 67 chr5 180402795 180402944 -19227206 + L2 LINE L2 3168 3313 0 325 307 33 13 chr5 180404311 180404461 -19225689 + L1 LINE L1 2442 2594 -3552 26 30 0 0 chr5 180404471 180404504 -19225646 + AT_rich Low_complexity Low_complexity 1 33 0 240 221 47 23 chr5 180404574 180404660 -19225490 + L1 LINE L1 2656 2743 -3403 21 36 0 0 chr5 180405295 180405323 -19224827 + AT_rich Low_complexity Low_complexity 1 28 0 690 256 102 30 chr5 180406480 180406842 -19223308 - L1ME3A LINE L1 -57 6105 5707 493 271 133 95 chr5 180406949 180407272 -19222878 - MLT1H1 LTR MaLR -2 553 201 2070 99 0 43 chr5 180407272 180407576 -19222574 + AluSc SINE Alu 1 291 -18 493 271 133 95 chr5 180407576 180407704 -19222446 - MLT1H1 LTR MaLR -354 201 79 443 233 68 37 chr5 180409072 180409235 -19220915 - MLT1H1 LTR MaLR -17 538 371 343 272 195 31 chr5 180409299 180409494 -19220656 - MLT1H LTR MaLR -297 258 32 279 0 0 0 chr5 180409650 180409681 -19220469 + (T)n Simple_repeat Simple_repeat 1 31 0 202 337 143 0 chr5 180409878 180409976 -19220174 + L2 LINE L2 3155 3266 -6 186 280 205 60 chr5 180410048 180410248 -19219902 - MIR SINE MIR 0 262 34 181 244 0 24 chr5 180410577 180410618 -19219532 + L2 LINE L2 2714 2753 -561 530 366 89 25 chr5 180410683 180411076 -19219074 + L2 LINE L2 2896 3313 0 241 409 84 0 chr5 180411199 180411353 -19218797 + L2 LINE L2 3101 3267 -5 1737 116 4 12 chr5 180411671 180411948 -19218202 - AluSp SINE Alu 0 313 49 21 0 0 0 chr5 180414501 180414522 -19215628 + AT_rich Low_complexity Low_complexity 1 21 0 249 319 97 32 chr5 180414883 180415068 -19215082 + MIR SINE MIR 39 235 -27 216 97 0 0 chr5 180416365 180416396 -19213754 + (TAA)n Simple_repeat Simple_repeat 3 33 0 200 114 29 0 chr5 180416688 180416723 -19213427 + CT-rich Low_complexity Low_complexity 1 36 0 744 193 148 12 chr5 180417587 180417831 -19212319 - MER58 DNA MER1_type 0 2420 2144 368 330 77 32 chr5 180417999 180418220 -19211930 + MIR SINE MIR 32 262 0 256 159 68 0 chr5 180418233 180418277 -19211873 - MER58 DNA MER1_type -133 82 36 741 278 87 29 chr5 180418303 180418649 -19211501 + LTR16A LTR ERVL 7 372 -78 738 261 13 0 chr5 180419909 180420066 -19210084 + MER5A DNA MER1_type 30 188 -1 2003 93 43 27 chr5 180420083 180420384 -19209766 + AluSg SINE Alu 1 306 -4 28 29 0 0 chr5 180420865 180420900 -19209250 + AT_rich Low_complexity Low_complexity 1 35 0 2689 237 101 62 chr5 180421399 180423168 -19206982 + L1M2b LINE L1 1 2451 -4758 * 4838 170 62 6 chr5 180423165 180424294 -19205856 + L1MA4 LINE L1 5112 6296 -4 237 113 472 0 chr5 180424470 180424523 -19205627 + MADE1 DNA Mariner 1 78 -2 384 286 80 9 chr5 180424857 180424969 -19205181 - L2 LINE L2 0 3313 3194 833 307 103 57 chr5 180426601 180427442 -19202708 + L1ME2 LINE L1 111 990 -5406 314 279 80 20 chr5 180427493 180427694 -19202456 + L1ME2 LINE L1 3535 3747 -2468 2949 261 47 60 chr5 180427695 180428926 -19201224 + L1ME2 LINE L1 3851 5096 -1137 2123 131 0 3 chr5 180428926 180429238 -19200912 - AluSq SINE Alu 0 313 3 2949 261 47 60 chr5 180429238 180429440 -19200710 + L1ME2 LINE L1 5096 5299 -934 2034 128 0 7 chr5 180429440 180429744 -19200406 + AluSc SINE Alu 1 302 -7 2949 261 47 60 chr5 180429744 180430159 -19199991 + L1ME2 LINE L1 5299 5670 -563 272 237 0 0 chr5 180430160 180430219 -19199931 - MLT1D LTR MaLR 0 505 447 807 245 8 51 chr5 180430221 180430458 -19199692 - MLT1D LTR MaLR -160 345 119 459 248 0 0 chr5 180430561 180430662 -19199488 - MLT1D LTR MaLR -521 105 5 1113 215 132 44 chr5 180430678 180431088 -19199062 + L1ME2 LINE L1 5696 6141 -92 25 31 0 0 chr5 180431407 180431439 -19198711 + AT_rich Low_complexity Low_complexity 1 32 0 467 319 84 9 chr5 180431530 180431743 -19198407 - MIR SINE MIR 0 262 34 210 91 0 0 chr5 180431754 180431787 -19198363 + (CA)n Simple_repeat Simple_repeat 2 34 0 2066 212 75 6 chr5 180432226 180432707 -19197443 - MER67D LTR ERV1 0 514 1 297 0 0 0 chr5 180433155 180433188 -19196962 + (TG)n Simple_repeat Simple_repeat 1 33 0 330 380 62 0 chr5 180433329 180433458 -19196692 + L2 LINE L2 3136 3272 0 4665 136 3 7 chr5 180434422 180435136 -19195014 - MER50 LTR ERV1 -23 711 1 1979 139 0 50 chr5 180435151 180435474 -19194676 + AluSx SINE Alu 1 307 -5 611 309 63 5 chr5 180435808 180436031 -19194119 - MIR SINE MIR -8 254 19 2413 128 17 3 chr5 180436809 180437168 -19192982 + THE1B LTR MaLR 1 364 0 2115 96 14 3 chr5 180438490 180438783 -19191367 + AluSq SINE Alu 1 296 -17 474 270 181 0 chr5 180440130 180440334 -19189816 - MIR SINE MIR -4 258 18 225 65 0 0 chr5 180440432 180440463 -19189687 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 74 0 0 chr5 180441660 180441687 -19188463 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr5 180442166 180442187 -19187963 + AT_rich Low_complexity Low_complexity 1 21 0 306 347 27 27 chr5 180442433 180442580 -19187570 + MIR SINE MIR 60 206 -56 437 277 34 20 chr5 180442810 180442958 -19187192 - MIR SINE MIR -12 250 101 2081 141 21 26 chr5 180443043 180443420 -19186730 - THE1C LTR MaLR 0 375 1 367 300 0 0 chr5 180443443 180443533 -19186617 - MER5A DNA MER1_type -87 102 13 207 309 25 0 chr5 180444016 180444097 -19186053 + A-rich Low_complexity Low_complexity 2 84 0 252 86 0 0 chr5 180444790 180444825 -19185325 + (GGGA)n Simple_repeat Simple_repeat 3 37 0 190 254 55 18 chr5 180445187 180445242 -19184908 - L2 LINE L2 -221 3051 2995 2136 137 96 10 chr5 180445482 180445876 -19184274 + MSTA LTR MaLR 1 428 0 215 396 19 19 chr5 180446620 180446726 -19183424 + MIR SINE MIR 32 137 -71 198 0 0 0 chr5 180446753 180446775 -19183375 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 270 284 11 34 chr5 180447111 180447199 -19182951 - L2 LINE L2 -188 3084 2999 25 51 0 0 chr5 180447686 180447725 -19182425 + AT_rich Low_complexity Low_complexity 1 39 0 26 64 0 0 chr5 180449272 180449319 -19180831 + AT_rich Low_complexity Low_complexity 1 47 0 1697 113 135 0 chr5 180449841 180450107 -19180043 - AluSx SINE Alu 0 302 1 25 0 0 0 chr5 180450116 180450141 -19180009 + AT_rich Low_complexity Low_complexity 1 25 0 1942 148 25 72 chr5 180450349 180450781 -19179369 - MSTB1 LTR MaLR -20 412 1 34 0 0 0 chr5 180450924 180450958 -19179192 + AT_rich Low_complexity Low_complexity 1 34 0 243 234 21 53 chr5 180451387 180451481 -19178669 - L1MC4 LINE L1 -1338 6704 6614 1994 112 28 3 chr5 180451491 180451776 -19178374 - AluSq SINE Alu -21 292 1 2004 142 0 7 chr5 180451862 180452164 -19177986 - AluSg SINE Alu -1 309 10 342 186 43 0 chr5 180452175 180452245 -19177905 + Charlie8 DNA MER1_type 119 191 -2226 967 208 17 38 chr5 180452285 180452525 -19177625 - Tigger7 DNA MER2_type -244 306 72 * 1919 154 20 20 chr5 180452520 180452865 -19177285 + Tigger7 DNA MER2_type 2243 2587 0 2029 133 82 17 chr5 180453443 180453795 -19176355 - THE1C LTR MaLR 0 375 1 10215 113 44 1 chr5 180453795 180455310 -19174840 - THE1B-int LTR MaLR 0 1580 1 2304 146 8 8 chr5 180455310 180455674 -19174476 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr5 180455875 180455895 -19174255 + (TTG)n Simple_repeat Simple_repeat 2 21 0 521 339 143 21 chr5 180457468 180457956 -19172194 - L2 LINE L2 -1 3312 2762 1765 151 33 7 chr5 180458123 180458427 -19171723 + AluSq SINE Alu 1 312 -1 22 0 0 0 chr5 180459071 180459093 -19171057 + AT_rich Low_complexity Low_complexity 1 22 0 2265 64 10 10 chr5 180459095 180459390 -19170760 + AluY SINE Alu 1 295 -16 232 261 0 0 chr5 180460505 180460570 -19169580 - MLT1F LTR MaLR 0 567 503 4140 179 31 30 chr5 180460570 180461451 -19168699 + L1MB8 LINE L1 5286 6167 -11 1813 238 47 42 chr5 180461462 180461933 -19168217 - MLT1F LTR MaLR -52 490 18 1466 176 20 44 chr5 180461952 180462247 -19167903 - AluJo SINE Alu -16 296 9 232 305 162 42 chr5 180462853 180463112 -19167038 + L2 LINE L2 2972 3261 -11 630 331 72 34 chr5 180463116 180463533 -19166617 - L3 LINE CR1 -16 1561 1129 26 30 0 0 chr5 180464536 180464569 -19165581 + AT_rich Low_complexity Low_complexity 1 33 0 375 235 265 54 chr5 180464587 180464791 -19165359 - MIR SINE MIR 0 262 16 185 264 93 97 chr5 180464786 180465002 -19165148 - L3 LINE CR1 -804 773 559 * 640 220 29 0 chr5 180465397 180465570 -19164580 - MER104 DNA MER2_type -2 178 1 449 307 61 39 chr5 180466108 180466339 -19163811 + MIR SINE MIR 11 246 -16 568 307 45 10 chr5 180466513 180466715 -19163435 + MIR SINE MIR 40 248 -14 520 306 69 9 chr5 180469523 180469755 -19160395 - MIR SINE MIR -6 256 11 224 308 0 15 chr5 180470628 180470693 -19159457 - MER5B DNA MER1_type -109 69 6 2746 3 0 3 chr5 180471853 180472158 -19157992 + AluYa5 SINE Alu 1 304 -7 6163 133 67 35 chr5 180473135 180474033 -19156117 + Tigger3b DNA MER2_type 38 982 -2046 2233 108 0 9 chr5 180474033 180474348 -19155802 - AluSx SINE Alu 0 312 1 6163 133 67 35 chr5 180474348 180474607 -19155543 + Tigger3b DNA MER2_type 982 1231 0 327 307 212 23 chr5 180475232 180475734 -19154416 + L2 LINE L2 2708 3309 -4 512 284 111 0 chr5 180475765 180475955 -19154195 - MIR SINE MIR -10 252 42 200 178 0 44 chr5 180477207 180477252 -19152898 + CT-rich Low_complexity Low_complexity 3 45 0 2021 169 19 5 chr5 180477380 180477747 -19152403 + MER83C LTR ERV1 2 373 0 427 298 68 6 chr5 180478622 180478783 -19151367 + MIR SINE MIR 92 262 0 390 333 108 61 chr5 180479335 180479759 -19150391 + L2 LINE L2 2804 3247 -66 21 0 0 0 chr5 180479769 180479790 -19150360 + AT_rich Low_complexity Low_complexity 1 21 0 250 277 0 15 chr5 180480137 180480202 -19149948 - LTR67 LTR ERVL -1 556 493 244 140 18 18 chr5 180480202 180480259 -19149891 + GA-rich Low_complexity Low_complexity 4 60 0 1197 132 81 17 chr5 180480272 180480507 -19149643 + L1P5 LINE L1 5556 5805 -349 393 58 93 14 chr5 180480507 180480646 -19149504 + (TA)n Simple_repeat Simple_repeat 2 151 0 244 123 82 14 chr5 180480848 180480921 -19149229 + (TA)n Simple_repeat Simple_repeat 2 79 0 226 133 0 0 chr5 180480921 180480966 -19149184 - LTR66 LTR ERVL -171 439 395 200 143 24 0 chr5 180480971 180481013 -19149137 + (TA)n Simple_repeat Simple_repeat 1 43 0 258 239 22 43 chr5 180481017 180481109 -19149041 - L1MC4 LINE L1 -1339 6703 6614 * 262 221 16 25 chr5 180481026 180481153 -19148997 + L1MC4 LINE L1 6572 6644 -1141 226 108 77 0 chr5 180481153 180481218 -19148932 + (TA)n Simple_repeat Simple_repeat 2 71 0 252 0 0 0 chr5 180481227 180481255 -19148895 + (CA)n Simple_repeat Simple_repeat 2 29 0 2213 143 0 24 chr5 180481255 180481624 -19148526 + L1PB3 LINE L1 5792 6153 -1 1585 176 25 0 chr5 180482429 180482713 -19147437 + AluJo SINE Alu 1 291 -21 248 240 0 0 chr5 180483346 180483396 -19146754 + GA-rich Low_complexity Low_complexity 2 51 0 205 194 0 0 chr5 180483399 180483435 -19146715 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 2107 125 3 0 chr5 180486479 180486790 -19143360 - AluSx SINE Alu 0 312 1 2279 137 174 2 chr5 180487558 180487990 -19142160 + LTR54 LTR ERV1 5 510 0 22 70 0 0 chr5 180488443 180488486 -19141664 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 180489629 180489651 -19140499 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 180489904 180489925 -19140225 + AT_rich Low_complexity Low_complexity 1 21 0 1842 128 17 73 chr5 180490049 180490354 -19139796 + MER44D DNA MER2_type 2 556 -1935 2172 86 3 52 chr5 180490354 180490679 -19139471 - AluY SINE Alu -2 309 1 1842 128 17 73 chr5 180490679 180490731 -19139419 + MER44D DNA MER2_type 556 609 0 24 53 0 0 chr5 180491991 180492029 -19138121 + AT_rich Low_complexity Low_complexity 1 38 0 1150 204 60 45 chr5 180492742 180493095 -19137055 - MER31A LTR ERV1 -55 430 73 461 312 59 41 chr5 180493087 180493308 -19136842 - MER102a DNA MER1_type -22 308 84 * 330 26 0 0 chr5 180493329 180493368 -19136782 + (TG)n Simple_repeat Simple_repeat 2 40 0 1708 131 34 21 chr5 180493368 180493650 -19136500 - AluSq SINE Alu -24 289 1 3111 125 26 2 chr5 180493674 180494138 -19136012 - MER1A DNA MER1_type 0 529 55 290 272 217 22 chr5 180495469 180495653 -19134497 - MIR SINE MIR -25 237 18 686 193 29 35 chr5 180495672 180495843 -19134307 - MIR SINE MIR 0 262 93 1349 216 52 0 chr5 180498387 180498674 -19131476 - AluJb SINE Alu 0 302 1 1413 286 85 51 chr5 180499635 180500423 -19129727 - MER21B LTR ERV1 -48 815 1 291 359 99 14 chr5 180501630 180501772 -19128378 + MER91A DNA MER1_type 43 196 0 312 206 19 9 chr5 180501824 180501931 -19128219 + GA-rich Low_complexity Low_complexity 3 110 0 208 27 54 27 chr5 180501947 180501984 -19128166 + (CAGGG)n Simple_repeat Simple_repeat 1 38 0 282 29 0 0 chr5 180502093 180502128 -19128022 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr5 180502596 180502618 -19127532 + AT_rich Low_complexity Low_complexity 1 22 0 1886 135 0 7 chr5 180502666 180502979 -19127171 - AluSg SINE Alu 0 311 1 1109 286 115 25 chr5 180503004 180503524 -19126626 - L1ME3A LINE L1 -9 6972 6406 1781 180 40 9 chr5 180503543 180503865 -19126285 - MER21A LTR ERV1 0 931 600 435 243 32 22 chr5 180503869 180504054 -19126096 - L1ME3A LINE L1 -4015 3123 2937 1646 275 10 45 chr5 180504072 180504566 -19125584 - L1ME3A LINE L1 -6382 477 1 449 359 63 22 chr5 180506017 180506240 -19123910 - MIR SINE MIR 0 262 31 2060 106 3 20 chr5 180507183 180507485 -19122665 + AluSx SINE Alu 1 297 -15 438 323 72 0 chr5 180507544 180507711 -19122439 - MIR SINE MIR -6 256 78 365 314 77 100 chr5 180508188 180508435 -19121715 + HAL1 LINE L1 827 1078 -1429 797 154 0 0 chr5 180508435 180508558 -19121592 - FLAM_C SINE Alu -10 123 1 365 314 77 100 chr5 180508558 180509042 -19121108 + HAL1 LINE L1 1078 1541 -966 337 321 93 45 chr5 180509674 180510123 -19120027 + L1M4 LINE L1 4919 5389 -757 307 272 102 39 chr5 180510254 180510519 -19119631 + L1P4 LINE L1 5584 5861 -305 316 241 71 21 chr5 180511831 180511972 -19118178 - L1ME LINE L1 -297 5824 5677 2169 149 0 20 chr5 180512687 180513042 -19117108 - MER7A DNA MER2_type 0 346 1 334 340 77 13 chr5 180513137 180513372 -19116778 - L1ME LINE L1 -806 5553 5304 21 36 0 0 chr5 180513620 180513648 -19116502 + AT_rich Low_complexity Low_complexity 1 28 0 410 337 10 48 chr5 180513796 180514037 -19116113 - L1ME LINE L1 -1302 4844 4616 1785 157 20 13 chr5 180514037 180514337 -19115813 - AluSx SINE Alu -10 302 1 410 337 10 48 chr5 180514337 180514404 -19115746 - L1ME LINE L1 -1530 4616 4548 522 319 116 39 chr5 180514433 180514554 -19115596 - L1ME LINE L1 -1709 4437 4327 2163 126 0 0 chr5 180514554 180514863 -19115287 - AluSx SINE Alu -3 309 1 522 319 116 39 chr5 180514863 180515259 -19114891 - L1ME LINE L1 -1819 4327 3880 1649 193 3 10 chr5 180515284 180515584 -19114566 + AluJo SINE Alu 1 298 -14 2108 124 0 13 chr5 180515586 180515892 -19114258 + AluSg SINE Alu 1 302 -8 978 282 23 17 chr5 180516122 180516473 -19113677 - L1MB8 LINE L1 -1 6177 5825 808 272 119 9 chr5 180516486 180516826 -19113324 - MSTD LTR MaLR -4 453 1 1904 205 72 48 chr5 180516833 180517540 -19112610 - L1MB8 LINE L1 -363 5803 5086 2545 284 38 43 chr5 180517540 180518782 -19111368 + L1ME2 LINE L1 2571 3808 -2338 8937 30 0 0 chr5 180518782 180520602 -19109548 - L1PA4 LINE L1 -8 6147 4317 2545 284 38 43 chr5 180520602 180520649 -19109501 + L1ME2 LINE L1 3808 3854 -2292 2679 192 65 5 chr5 180520660 180521264 -19108886 + L1MC3 LINE L1 7143 7782 -3 2793 264 49 39 chr5 180521265 180521817 -19108333 + L1ME2 LINE L1 3840 4385 -1761 743 168 0 0 chr5 180521817 180521942 -19108208 + FLAM_C SINE Alu 3 127 -6 2793 264 49 39 chr5 180521942 180522120 -19108030 + L1ME2 LINE L1 4385 4560 -1586 2160 125 0 0 chr5 180522120 180522423 -19107727 + AluY SINE Alu 1 303 -8 2793 264 49 39 chr5 180522423 180522951 -19107199 + L1ME2 LINE L1 4560 5112 -1034 183 42 0 0 chr5 180523084 180523108 -19107042 + (GA)n Simple_repeat Simple_repeat 1 24 0 302 127 164 0 chr5 180523412 180523467 -19106683 + L1ME2 LINE L1 5152 5215 -931 1358 289 48 25 chr5 180523471 180524029 -19106121 + L1ME2 LINE L1 5254 5824 -342 13021 214 40 28 chr5 180524048 180528658 -19101492 + L1MA5 LINE L1 4 5617 -1745 189 0 0 0 chr5 180528658 180528679 -19101471 + (CA)n Simple_repeat Simple_repeat 2 22 0 13021 214 40 28 chr5 180528679 180530446 -19099704 + L1MA5 LINE L1 5617 7360 -2 29 47 0 0 chr5 180530464 180530507 -19099643 + AT_rich Low_complexity Low_complexity 1 43 0 1272 131 15 10 chr5 180530510 180530733 -19099417 + AluJb SINE Alu 84 307 0 378 204 0 20 chr5 180530735 180530833 -19099317 + L1ME2 LINE L1 5817 5912 -252 516 216 115 7 chr5 180530905 180531053 -19099097 + L1MA10 LINE L1 6170 6333 -1 270 0 0 0 chr5 180531146 180531176 -19098974 + (TC)n Simple_repeat Simple_repeat 2 31 0 294 148 0 0 chr5 180531176 180531230 -19098920 + (TA)n Simple_repeat Simple_repeat 2 55 0 2236 95 3 0 chr5 180531382 180531687 -19098463 - AluY SINE Alu -5 306 1 370 302 9 9 chr5 180533378 180533494 -19096656 + L2 LINE L2 1087 1202 -2112 610 272 78 9 chr5 180533559 180533776 -19096374 + L2 LINE L2 1413 1644 -1670 286 330 39 0 chr5 180533785 180533888 -19096262 + LTR37B LTR ERV1 5 111 -357 591 197 143 33 chr5 180534238 180534482 -19095668 + LTR37B LTR ERV1 198 468 0 966 257 131 40 chr5 180534482 180534933 -19095217 + L2 LINE L2 1641 2132 -1182 30 59 0 0 chr5 180535321 180535372 -19094778 + AT_rich Low_complexity Low_complexity 1 51 0 271 251 117 62 chr5 180536085 180536264 -19093886 + MARNA DNA Mariner 298 486 -100 24 0 0 0 chr5 180537482 180537506 -19092644 + AT_rich Low_complexity Low_complexity 1 24 0 468 256 280 12 chr5 180538156 180538406 -19091744 + MER5C DNA MER1_type 8 324 0 30 69 0 0 chr5 180538759 180538817 -19091333 + AT_rich Low_complexity Low_complexity 1 58 0 24 0 0 0 chr5 180538835 180538859 -19091291 + AT_rich Low_complexity Low_complexity 1 24 0 1802 166 3 3 chr5 180539176 180539477 -19090673 + AluJb SINE Alu 1 301 -11 234 0 0 0 chr5 180539504 180539530 -19090620 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 195 204 0 0 chr5 180540343 180540387 -19089763 + (TA)n Simple_repeat Simple_repeat 1 44 0 210 238 107 48 chr5 180540387 180540471 -19089679 - MIR SINE MIR -61 201 113 221 182 18 0 chr5 180540642 180540697 -19089453 + GA-rich Low_complexity Low_complexity 2 57 0 196 363 89 0 chr5 180540733 180540868 -19089282 - L3 LINE CR1 -463 1114 968 6431 91 20 13 chr5 180541924 180542854 -19087296 - L1PA12 LINE L1 0 6168 5230 2629 104 0 0 chr5 180542854 180543209 -19086941 + THE1A LTR MaLR 1 355 0 6431 91 20 13 chr5 180543209 180543500 -19086650 - L1PA12 LINE L1 -938 5230 4942 3537 186 22 3 chr5 180543500 180544193 -19085957 + L1PA12 LINE L1 4216 4921 -1225 201 108 0 0 chr5 180544206 180544243 -19085907 + (CA)n Simple_repeat Simple_repeat 2 38 0 763 264 32 88 chr5 180544243 180544584 -19085566 + MER102b DNA MER1_type 17 338 -3 813 167 0 40 chr5 180544843 180544993 -19085157 + AluJb SINE Alu 1 144 -168 2598 181 34 0 chr5 180545995 180546464 -19083686 - MER66B LTR ERV1 0 486 2 310 269 48 29 chr5 180546947 180547051 -19083099 + MIR SINE MIR 24 129 -133 332 303 32 7 chr5 180547232 180547387 -19082763 - L1ME LINE L1 -303 5818 5660 1486 120 5 0 chr5 180547450 180547724 -19082426 + AluSg/x SINE Alu 85 359 0 287 264 14 0 chr5 180549317 180549389 -19080761 + (TG)n Simple_repeat Simple_repeat 1 73 0 311 89 18 0 chr5 180550774 180550830 -19079320 + (TC)n Simple_repeat Simple_repeat 2 58 0 21 36 0 0 chr5 180551766 180551794 -19078356 + AT_rich Low_complexity Low_complexity 1 28 0 1426 134 5 5 chr5 180553768 180553991 -19076159 - AluSg/x SINE Alu -2 310 88 459 81 27 0 chr5 180555000 180555074 -19075076 - MADE1 DNA Mariner -4 76 1 180 0 0 0 chr5 180555514 180555534 -19074616 + (A)n Simple_repeat Simple_repeat 1 20 0 9045 208 39 29 chr5 180556244 180558007 -19072143 - L1PBa LINE L1 -1184 5678 3935 197 33 33 0 chr5 180558007 180558037 -19072113 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9045 208 39 29 chr5 180558037 180559512 -19070638 - L1PBa LINE L1 -2927 3935 2512 2117 131 3 0 chr5 180559512 180559818 -19070332 - AluSg SINE Alu -3 307 1 9045 208 39 29 chr5 180559818 180560086 -19070064 - L1PBa LINE L1 -4350 2512 2248 24 53 0 0 chr5 180560392 180560430 -19069720 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 180560441 180560462 -19069688 + AT_rich Low_complexity Low_complexity 1 21 0 1428 185 0 58 chr5 180560917 180561225 -19068925 - AluJo SINE Alu -22 290 1 23 33 0 0 chr5 180561372 180561402 -19068748 + AT_rich Low_complexity Low_complexity 1 30 0 208 340 124 31 chr5 180561900 180562094 -19068056 + MIR SINE MIR 2 213 -49 254 318 32 48 chr5 180562115 180562241 -19067909 - L2 LINE L2 -35 3278 3155 180 158 0 0 chr5 180562906 180562944 -19067206 + GA-rich Low_complexity Low_complexity 1 38 0 325 250 0 52 chr5 180564666 180564762 -19065388 + L1MC4 LINE L1 6612 6702 -1340 251 228 0 0 chr5 180564766 180564823 -19065327 + (TA)n Simple_repeat Simple_repeat 2 58 0 260 343 0 0 chr5 180565020 180565090 -19065060 - Tigger3(Golem) DNA MER2_type -2959 70 1 459 215 0 25 chr5 180565090 180565211 -19064939 - L1MA9 LINE L1 -46 6266 6149 584 224 36 12 chr5 180565242 180565407 -19064743 + AluSc SINE Alu 100 268 -41 4715 179 40 22 chr5 180565802 180565897 -19064253 - L1MA9 LINE L1 -49 6263 6171 303 28 0 0 chr5 180565897 180565933 -19064217 + (TG)n Simple_repeat Simple_repeat 2 37 0 4715 179 40 22 chr5 180565933 180565948 -19064202 - L1MA9 LINE L1 -141 6171 6158 1473 82 5 24 chr5 180565948 180566154 -19063996 + AluSc SINE Alu 100 301 -8 4715 179 40 22 chr5 180566154 180567114 -19063036 - L1MA9 LINE L1 -154 6158 5179 209 322 0 123 chr5 180567162 180567308 -19062842 - MIR SINE MIR -134 128 1 181 238 0 0 chr5 180568558 180568600 -19061550 + L2 LINE L2 3019 3060 -253 239 333 0 0 chr5 180568716 180568782 -19061368 + MIR SINE MIR 13 78 -184 888 132 0 0 chr5 180568792 180568928 -19061222 - AluSg/x SINE Alu -3 309 174 450 218 0 106 chr5 180568934 180569022 -19061128 + MIR SINE MIR 71 140 -122 2215 116 0 0 chr5 180569022 180569324 -19060826 + AluSg SINE Alu 1 302 -8 450 218 0 106 chr5 180569324 180569377 -19060773 + MIR SINE MIR 140 197 -65 276 279 38 13 chr5 180569403 180569482 -19060668 + L2 LINE L2 3229 3309 -4 32 0 0 0 chr5 180569484 180569516 -19060634 + AT_rich Low_complexity Low_complexity 1 32 0 341 344 45 19 chr5 180569887 180570044 -19060106 + MIR3 SINE MIR 18 178 -30 481 252 99 50 chr5 180570050 180570292 -19059858 - L2 LINE L2 -2 3311 3058 5328 188 77 15 chr5 180570679 180570999 -19059151 - L1PBa LINE L1 -4559 2304 2005 2301 96 0 3 chr5 180570999 180571300 -19058850 - AluSg SINE Alu -10 300 1 5328 188 77 15 chr5 180571300 180573004 -19057146 - L1PBa LINE L1 -4858 2005 6 209 295 33 0 chr5 180573065 180573126 -19057024 - L2 LINE L2 -1 3312 3250 1278 242 30 76 chr5 180573417 180574242 -19055908 - L1ME3 LINE L1 -164 6067 5254 386 294 94 48 chr5 180574411 180574980 -19055170 - L1ME3 LINE L1 -4421 1975 1434 1666 111 4 0 chr5 180574980 180575224 -19054926 - L1MA1 LINE L1 -4 6298 6054 386 294 94 48 chr5 180575224 180575728 -19054422 - L1ME3 LINE L1 -4962 1434 836 320 333 93 31 chr5 180576095 180576416 -19053734 - L1ME3 LINE L1 -5973 423 83 3339 246 51 39 chr5 180577089 180579797 -19050353 + L1M4 LINE L1 595 3449 -3195 1737 153 18 0 chr5 180579930 180580204 -19049946 + AluSq SINE Alu 1 279 -34 2301 76 0 7 chr5 180580951 180581253 -19048897 - AluSx SINE Alu -12 300 1 196 306 32 16 chr5 180581549 180581611 -19048539 - MIR3 SINE MIR -48 160 98 235 339 176 0 chr5 180582174 180582339 -19047811 - MIR SINE MIR -56 206 13 349 155 0 0 chr5 180582624 180582682 -19047468 + FRAM/FAM SINE Alu 1 58 -117 2324 190 19 0 chr5 180582683 180583099 -19047051 - MSTB LTR MaLR -2 424 1 524 174 0 41 chr5 180583099 180583197 -19046953 + FRAM SINE Alu 53 146 -30 266 0 0 29 chr5 180583201 180583236 -19046914 + (TAAAA)n Simple_repeat Simple_repeat 4 37 0 398 246 56 73 chr5 180583245 180583421 -19046729 - L1MC4 LINE L1 -1 8041 7872 1109 234 35 69 chr5 180583421 180583714 -19046436 - MLT1A1 LTR MaLR -2 363 84 2250 84 20 0 chr5 180583714 180584010 -19046140 - AluSc SINE Alu -7 302 1 1109 234 35 69 chr5 180584010 180584092 -19046058 - MLT1A1 LTR MaLR -281 84 1 398 246 56 73 chr5 180584092 180584256 -19045894 - L1MC4 LINE L1 -170 7872 7707 2146 115 3 7 chr5 180584330 180584634 -19045516 + AluSq SINE Alu 1 303 -10 368 290 56 46 chr5 180584650 180585040 -19045110 - L1MC5 LINE L1 -448 7513 7261 242 231 26 13 chr5 180585064 180585142 -19045008 - L1MC5 LINE L1 -733 7228 7150 746 228 43 5 chr5 180585372 180585556 -19044594 - L1MC4 LINE L1 -1149 6893 6703 736 277 62 16 chr5 180585702 180586023 -19044127 - L1M4 LINE L1 -1034 5112 4777 1923 142 164 11 chr5 180586024 180586390 -19043760 - MSTA LTR MaLR 0 428 7 318 297 70 0 chr5 180586395 180586523 -19043627 - L1M4 LINE L1 -1366 4780 4644 1084 273 82 25 chr5 180586525 180587034 -19043116 - L1M4 LINE L1 -1592 4554 4017 817 267 123 10 chr5 180587172 180587775 -19042375 - L1M4 LINE L1 -2728 3418 2748 24 0 0 0 chr5 180587804 180587828 -19042322 + AT_rich Low_complexity Low_complexity 1 24 0 3440 262 49 63 chr5 180587830 180588413 -19041737 - L1M4 LINE L1 -793 5353 4763 180 111 0 0 chr5 180588413 180588440 -19041710 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 3440 262 49 63 chr5 180588440 180589124 -19041026 - L1M4 LINE L1 -1383 4763 4117 2292 71 10 7 chr5 180589124 180589418 -19040732 - AluY SINE Alu -16 295 1 3440 262 49 63 chr5 180589418 180589919 -19040231 - L1M4 LINE L1 -2029 4117 3610 281 307 13 0 chr5 180590041 180590116 -19040034 - L2 LINE L2 -1 3312 3237 2228 100 6 0 chr5 180590515 180590826 -19039324 - AluSp SINE Alu 0 313 1 237 159 0 0 chr5 180592072 180592116 -19038034 + A-rich Low_complexity Low_complexity 1 44 0 27 29 0 0 chr5 180592883 180592917 -19037233 + AT_rich Low_complexity Low_complexity 1 34 0 1449 183 56 11 chr5 180593031 180593315 -19036835 - AluJo SINE Alu -10 302 6 2407 61 3 10 chr5 180593876 180594189 -19035961 - AluY SINE Alu 0 311 1 303 337 0 0 chr5 180594237 180594338 -19035812 + MIR SINE MIR 161 261 -1 180 289 58 0 chr5 180594863 180594915 -19035235 + MIR SINE MIR 206 260 -2 2236 117 0 0 chr5 180596628 180596926 -19033224 + AluSg SINE Alu 1 298 -12 1782 157 37 57 chr5 180597064 180597511 -19032639 + THE1C LTR MaLR 1 428 0 9223 126 51 39 chr5 180597511 180599072 -19031078 + THE1C-int LTR MaLR 1 1580 0 2509 125 0 5 chr5 180599072 180599446 -19030704 + THE1C LTR MaLR 3 375 0 901 329 63 7 chr5 180599638 180600100 -19030050 + LTR16C LTR ERVL 1 488 -3 446 256 105 0 chr5 180600207 180600340 -19029810 + MIR SINE MIR 72 218 -44 384 361 38 17 chr5 180600970 180601208 -19028942 + MIR SINE MIR 20 262 0 24 67 0 0 chr5 180601208 180601253 -19028897 + AT_rich Low_complexity Low_complexity 1 45 0 205 278 9 93 chr5 180601533 180601641 -19028509 - MIR SINE MIR -4 258 160 242 73 24 0 chr5 180601765 180601806 -19028344 + (TG)n Simple_repeat Simple_repeat 1 42 0 2025 200 3 13 chr5 180602130 180602520 -19027630 + MLT1B LTR MaLR 1 386 -4 1697 278 48 21 chr5 180604291 180604902 -19025248 + L1ME3A LINE L1 5401 6027 -143 239 167 42 42 chr5 180604906 180604978 -19025172 + L1ME3A LINE L1 6099 6170 0 273 297 123 20 chr5 180605053 180605334 -19024816 - L1ME4a LINE L1 -197 5924 5599 2272 109 0 0 chr5 180605334 180605627 -19024523 + AluSx SINE Alu 1 293 -19 273 297 123 20 chr5 180605627 180605695 -19024455 - L1ME4a LINE L1 -522 5599 5539 24 85 0 0 chr5 180605757 180605816 -19024334 + AT_rich Low_complexity Low_complexity 1 59 0 33 25 0 0 chr5 180606185 180606225 -19023925 + AT_rich Low_complexity Low_complexity 1 40 0 28 29 0 0 chr5 180606311 180606346 -19023804 + AT_rich Low_complexity Low_complexity 1 35 0 1146 294 45 45 chr5 180606457 180606947 -19023203 - MLT1K LTR MaLR -86 502 13 291 295 41 98 chr5 180607172 180607416 -19022734 - L3 LINE CR1 -904 673 444 564 66 0 0 chr5 180607525 180607601 -19022549 - L1PA5 LINE L1 -2 6152 6077 1188 60 0 7 chr5 180607601 180607752 -19022398 + L1PA6 LINE L1 5850 5999 -155 355 290 75 4 chr5 180607767 180607943 -19022207 - L1 LINE L1 -2947 3199 3006 268 103 35 35 chr5 180608147 180608205 -19021945 + L1PA5 LINE L1 6033 6090 -64 2173 98 25 0 chr5 180609909 180610195 -19019955 + AluSx SINE Alu 7 299 -13 813 293 18 9 chr5 180612076 180612305 -19017845 - MIR SINE MIR 0 262 32 279 0 0 0 chr5 180612311 180612342 -19017808 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 2423 43 0 0 chr5 180612343 180612673 -19017477 - AluY SINE Alu 0 335 6 252 306 83 45 chr5 180612709 180612951 -19017199 + L2 LINE L2 3042 3292 -21 1468 194 14 14 chr5 180613555 180613838 -19016312 + AluJb SINE Alu 2 284 -28 2258 84 0 10 chr5 180614315 180614614 -19015536 - AluY SINE Alu -15 296 1 630 261 38 42 chr5 180614846 180615107 -19015043 - MIR SINE MIR 0 262 3 1182 151 0 0 chr5 180615145 180615330 -19014820 - AluSg/x SINE Alu -5 307 123 274 277 32 11 chr5 180615962 180616056 -19014094 - MIR3 SINE MIR -9 199 104 864 272 65 72 chr5 180616188 180616648 -19013502 + LTR16A1 LTR ERVL 1 457 0 404 365 7 6 chr5 180619049 180619231 -19010919 - MIR SINE MIR -26 236 56 2525 37 3 0 chr5 180620686 180620984 -19009166 + AluY SINE Alu 1 299 -12 194 268 0 0 chr5 180621680 180621721 -19008429 + L2 LINE L2 3034 3074 -239 207 114 0 0 chr5 180621934 180621969 -19008181 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 206 268 36 0 chr5 180622132 180622188 -19007962 - MIR SINE MIR 0 262 205 12038 131 19 37 chr5 180622269 180624590 -19005560 - Tigger1 DNA MER2_type -25 2393 92 950 204 16 0 chr5 180624588 180624774 -19005376 + MER2 DNA MER2_type 17 205 -140 * 312 320 73 13 chr5 180625287 180625437 -19004713 + MIR SINE MIR 16 174 -88 304 266 105 21 chr5 180625446 180625589 -19004561 - LTR16C LTR ERVL -10 481 327 415 219 36 66 chr5 180626103 180626158 -19003992 + L1ME LINE L1 5563 5618 -546 5547 91 24 23 chr5 180626158 180626983 -19003167 - LTR12 LTR ERV1 0 826 1 415 219 36 66 chr5 180626983 180627064 -19003086 + L1ME LINE L1 5618 5695 -469 243 244 198 0 chr5 180627191 180627277 -19002873 + MIR SINE MIR 160 262 0 201 159 68 0 chr5 180627455 180627499 -19002651 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 39 68 0 0 chr5 180627963 180628037 -19002113 + AT_rich Low_complexity Low_complexity 1 74 0 271 300 108 39 chr5 180628361 180628491 -19001659 - L2 LINE L2 -1 3271 3133 2055 117 0 3 chr5 180628542 180628824 -19001326 + AluSq SINE Alu 1 281 -32 378 143 0 0 chr5 180628824 180628887 -19001263 + (CA)n Simple_repeat Simple_repeat 2 64 0 1196 168 0 0 chr5 180629036 180629226 -19000924 + AluSx SINE Alu 1 190 -122 656 108 0 0 chr5 180629834 180629927 -19000223 + AluJ/FLAM SINE Alu 1 93 -219 328 339 94 59 chr5 180629973 180630378 -18999772 + L1ME LINE L1 4528 4968 -1178 1801 195 43 3 chr5 180630378 180630753 -18999397 - MLT1B LTR MaLR 0 390 1 328 339 94 59 chr5 180630753 180631029 -18999121 + L1ME LINE L1 4968 5233 -913 345 262 37 30 chr5 180631301 180631465 -18998685 + L1ME LINE L1 5527 5691 -430 2100 130 0 7 chr5 180631705 180632013 -18998137 - AluSg SINE Alu -4 306 1 2313 97 0 0 chr5 180633019 180633317 -18996833 - AluSq SINE Alu -13 300 3 482 156 0 0 chr5 180633334 180633411 -18996739 - AluSq SINE Alu -102 211 135 180 111 0 0 chr5 180633412 180633439 -18996711 + (TA)n Simple_repeat Simple_repeat 2 28 0 356 261 23 0 chr5 180633439 180633527 -18996623 - L1MC4 LINE L1 -1339 6703 6614 343 272 0 22 chr5 180633453 180633545 -18996605 + L1MC4 LINE L1 6614 6703 -1339 * 301 196 0 0 chr5 180633543 180633599 -18996551 - L1MC4 LINE L1 -1339 6703 6648 * 2163 85 0 7 chr5 180633620 180633925 -18996225 - AluY SINE Alu 0 303 1 964 81 0 0 chr5 180633935 180634058 -18996092 - AluSc SINE Alu -186 123 1 367 338 45 0 chr5 180635037 180635191 -18994959 + MIR SINE MIR 37 197 -65 1555 192 3 18 chr5 180636143 180636429 -18993721 + AluJo SINE Alu 1 282 -30 312 177 48 0 chr5 180636679 180636741 -18993409 + MLT1I LTR MaLR 101 165 -244 2041 134 0 7 chr5 180636927 180637233 -18992917 + AluSx SINE Alu 1 304 -8 569 80 11 0 chr5 180637912 180638000 -18992150 + (TTTAA)n Simple_repeat Simple_repeat 4 92 0 466 277 45 17 chr5 180638056 180638233 -18991917 - L1MC4 LINE L1 -2272 5536 5355 240 341 119 59 chr5 180638264 180638759 -18991391 - L2 LINE L2 -15 3298 2747 897 176 21 16 chr5 180638759 180638946 -18991204 - MER53 DNA DNA 0 189 2 240 341 119 59 chr5 180638946 180639001 -18991149 - L2 LINE L2 -566 2747 2697 * 283 294 0 84 chr5 180638996 180639115 -18991035 - MIR SINE MIR -150 112 4 194 0 39 0 chr5 180639449 180639475 -18990675 + (CAAAA)n Simple_repeat Simple_repeat 1 27 0 1534 188 109 3 chr5 180639542 180639871 -18990279 - MLT1A1 LTR MaLR -1 364 1 398 265 71 27 chr5 180639888 180640147 -18990003 + L1MC4a LINE L1 5291 5550 -614 4286 57 4 0 chr5 180640195 180640740 -18989410 - L1PA7 LINE L1 -11 6143 5597 1185 149 0 0 chr5 180640742 180640936 -18989214 - L1P3 LINE L1 -6260 201 8 351 256 211 45 chr5 180640985 180641227 -18988923 + L1MC4a LINE L1 5658 5939 -1869 218 160 20 0 chr5 180641245 180641295 -18988855 + (TA)n Simple_repeat Simple_repeat 2 52 0 294 29 0 0 chr5 180641642 180641677 -18988473 + (CA)n Simple_repeat Simple_repeat 1 35 0 541 265 29 7 chr5 180641795 180641931 -18988219 + MIR SINE MIR 31 169 -93 24 0 0 0 chr5 180642107 180642131 -18988019 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 180643462 180643483 -18986667 + AT_rich Low_complexity Low_complexity 1 21 0 221 57 29 0 chr5 180643801 180643836 -18986314 + (TCCA)n Simple_repeat Simple_repeat 2 37 0 185 348 134 49 chr5 180644011 180644235 -18985915 - L2 LINE L2 -585 2729 2487 413 289 51 46 chr5 180645134 180645331 -18984819 - MLT1J1 LTR MaLR -26 420 223 345 284 101 20 chr5 180645371 180645519 -18984631 - MLT1J1 LTR MaLR -286 160 1 604 238 31 22 chr5 180645535 180645762 -18984388 - L1MEc LINE L1 -2998 3943 3715 1182 165 64 0 chr5 180645778 180646014 -18984136 + L1PA13 LINE L1 4949 5199 -947 1611 129 33 120 chr5 180646041 180646167 -18983983 + AluSx SINE Alu 1 136 -176 2111 112 7 0 chr5 180646167 180646454 -18983696 + AluSx SINE Alu 1 289 -23 1611 129 33 120 chr5 180646454 180646661 -18983489 + AluSx SINE Alu 136 305 -7 6120 89 15 14 chr5 180646686 180647659 -18982491 + L1PA13 LINE L1 5189 6163 0 1381 309 79 19 chr5 180647678 180649286 -18980864 - L1MEc LINE L1 -3238 3703 2025 372 253 132 91 chr5 180649295 180649534 -18980616 - L1MEc LINE L1 -5032 1912 1684 2380 69 0 3 chr5 180649534 180649839 -18980311 - AluY SINE Alu -6 305 2 1603 144 52 7 chr5 180649840 180650110 -18980040 - AluSx SINE Alu -30 282 1 372 253 132 91 chr5 180650110 180650208 -18979942 - L1MEc LINE L1 -5259 1685 1559 285 326 51 29 chr5 180650246 180650421 -18979729 - L1MEc LINE L1 -5071 1352 1174 198 0 0 0 chr5 180651006 180651028 -18979122 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 23 0 0 0 chr5 180651205 180651228 -18978922 + AT_rich Low_complexity Low_complexity 1 23 0 243 286 23 15 chr5 180651901 180652034 -18978116 + (TA)n Simple_repeat Simple_repeat 1 134 0 1858 166 0 0 chr5 180652397 180652706 -18977444 + AluSx SINE Alu 1 309 0 281 299 161 35 chr5 180652907 180653679 -18976471 - L1M4 LINE L1 -1399 4747 3879 1895 160 27 24 chr5 180654732 180655106 -18975044 - THE1C LTR MaLR 0 375 1 372 284 9 52 chr5 180655120 180655236 -18974914 + L2 LINE L2 3191 3301 -12 310 295 54 8 chr5 180655367 180655496 -18974654 - MIR SINE MIR -4 258 124 2043 236 43 7 chr5 180656565 180657166 -18972984 + L1M4 LINE L1 2445 3067 -3079 22 56 0 0 chr5 180657166 180657202 -18972948 + AT_rich Low_complexity Low_complexity 1 36 0 916 309 31 6 chr5 180657202 180657555 -18972595 - L1MEc LINE L1 -4580 1816 1455 450 59 0 94 chr5 180657577 180657662 -18972488 - L1PA6 LINE L1 0 6154 6078 443 223 55 30 chr5 180657662 180657864 -18972286 + L1M4 LINE L1 3063 3269 -2877 556 286 27 2 chr5 180657869 180658093 -18972057 + L1M4 LINE L1 3418 3646 -2500 620 288 83 29 chr5 180658424 180658799 -18971351 + MLT1L LTR MaLR 164 558 -57 233 167 19 0 chr5 180659012 180659066 -18971084 + (TA)n Simple_repeat Simple_repeat 1 55 0 1859 131 45 3 chr5 180659308 180659599 -18970551 + AluSx SINE Alu 7 309 -3 483 212 0 146 chr5 180659632 180659858 -18970292 - 7SK RNA RNA 0 193 1 264 356 30 23 chr5 180659867 180659999 -18970151 + MIR3 SINE MIR 47 179 -29 897 320 83 1 chr5 180660576 180661063 -18969087 - L2 LINE L2 -20 3293 2755 425 159 26 3 chr5 180661063 180661179 -18968971 + L1PA14 LINE L1 5355 5477 -686 23 33 0 0 chr5 180661351 180661381 -18968769 + AT_rich Low_complexity Low_complexity 1 30 0 4458 100 10 35 chr5 180661392 180661791 -18968359 + L1PA14 LINE L1 5480 5856 -305 2259 113 0 0 chr5 180661791 180662101 -18968049 - AluSx SINE Alu -2 310 1 4458 100 10 35 chr5 180662101 180662391 -18967759 + L1PA14 LINE L1 5856 6152 -9 1277 286 205 17 chr5 180662398 180663095 -18967055 - L2 LINE L2 -575 2739 1912 348 169 28 14 chr5 180663681 180663775 -18966375 + FLAM_A SINE Alu 46 140 0 286 290 43 68 chr5 180664202 180664418 -18965732 + HAL1b LINE L1 27 232 -1116 2276 78 16 10 chr5 180664418 180664727 -18965423 - AluY SINE Alu 0 311 1 286 290 43 68 chr5 180664727 180664862 -18965288 + HAL1b LINE L1 232 369 -979 339 283 75 37 chr5 180664905 180665092 -18965058 + L1MC4a LINE L1 4872 5065 -1081 1444 242 40 28 chr5 180665258 180665729 -18964421 + L1MC4a LINE L1 5257 5733 -2075 3733 153 12 144 chr5 180665732 180665977 -18964173 - MER6 DNA MER2_type 0 865 589 2409 66 0 3 chr5 180665977 180666280 -18963870 + AluY SINE Alu 1 302 -9 3733 153 12 144 chr5 180666280 180667031 -18963119 - MER6 DNA MER2_type -276 589 1 375 213 201 84 chr5 180667049 180667382 -18962768 + L1MC4a LINE L1 5753 6124 -1684 49 52 0 0 chr5 180667406 180667483 -18962667 + AT_rich Low_complexity Low_complexity 1 77 0 201 175 0 0 chr5 180667582 180667622 -18962528 + GA-rich Low_complexity Low_complexity 3 42 0 2666 267 90 58 chr5 180667690 180669320 -18960830 + L1MC4 LINE L1 6359 8040 -2 586 331 136 29 chr5 180669336 180669490 -18960660 - L2 LINE L2 -1394 1920 1784 1970 114 20 23 chr5 180669490 180669789 -18960361 + AluSg SINE Alu 2 299 -11 586 331 136 29 chr5 180669789 180670084 -18960066 - L2 LINE L2 -1530 1784 1423 198 398 56 0 chr5 180670083 180670191 -18959959 - L2 LINE L2 -31 3282 3169 * 240 379 48 35 chr5 180670357 180670584 -18959566 - L2 LINE L2 -410 2904 2675 388 295 25 8 chr5 180670625 180670747 -18959403 - MIR SINE MIR -34 228 105 255 306 122 55 chr5 180670726 180670997 -18959153 - L2 LINE L2 -4 3309 3021 * 485 270 46 7 chr5 180671020 180671172 -18958978 - L2 LINE L2 -4 3309 3152 334 323 31 0 chr5 180671745 180671875 -18958275 + MER94 DNA DNA 1 134 0 29 0 0 0 chr5 180672105 180672134 -18958016 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr5 180672849 180672873 -18957277 + (A)n Simple_repeat Simple_repeat 1 24 0 489 268 47 76 chr5 180672884 180673160 -18956990 + L2 LINE L2 3046 3313 0 201 159 0 0 chr5 180675552 180675596 -18954554 + CT-rich Low_complexity Low_complexity 1 44 0 224 200 0 0 chr5 180676231 180676271 -18953879 + (CA)n Simple_repeat Simple_repeat 2 41 0 248 128 0 21 chr5 180676438 180676485 -18953665 + (TCCC)n Simple_repeat Simple_repeat 4 49 0 1683 295 52 69 chr5 180676737 180677439 -18952711 - L2 LINE L2 -718 2596 1884 2156 122 72 17 chr5 180677439 180677784 -18952366 + THE1B LTR MaLR 1 364 0 11546 88 2 28 chr5 180677784 180678213 -18951937 + THE1B-int LTR MaLR 1 439 -1141 1951 124 48 3 chr5 180678213 180678503 -18951647 - AluSq SINE Alu -10 303 1 11546 88 2 28 chr5 180678503 180678605 -18951545 + THE1B-int LTR MaLR 439 542 -1038 2339 106 0 0 chr5 180678605 180678907 -18951243 - AluSc SINE Alu -2 307 6 11546 88 2 28 chr5 180678907 180679995 -18950155 + THE1B-int LTR MaLR 542 1580 0 1649 168 85 21 chr5 180679997 180680337 -18949813 + THE1B LTR MaLR 3 364 0 1683 295 52 69 chr5 180680337 180680417 -18949733 - L2 LINE L2 -1430 1884 1823 510 278 41 60 chr5 180680418 180680684 -18949466 + HAL1 LINE L1 4 264 -2243 728 289 58 11 chr5 180680775 180681035 -18949115 + HAL1 LINE L1 630 901 -1606 1410 280 92 20 chr5 180681145 180681648 -18948502 + L1M4c LINE L1 33 571 -5742 264 419 35 6 chr5 180681777 180681949 -18948201 + L1M4c LINE L1 883 1059 -5254 1190 266 6 85 chr5 180681990 180682264 -18947886 + L1M4c LINE L1 972 1266 -5047 1710 152 19 57 chr5 180682264 180682580 -18947570 + AluSx SINE Alu 1 304 -8 1190 266 6 85 chr5 180682580 180682608 -18947542 + L1M4c LINE L1 1266 1295 -5018 252 59 0 0 chr5 180682608 180682642 -18947508 + (CA)n Simple_repeat Simple_repeat 1 34 0 1190 266 6 85 chr5 180682642 180682845 -18947305 + L1M4c LINE L1 1295 1438 -4875 1093 179 0 0 chr5 180682858 180683060 -18947090 - AluSg/x SINE Alu 0 316 115 1518 258 87 49 chr5 180683060 180683485 -18946665 + L1M4c LINE L1 1315 1722 -4662 2279 99 3 6 chr5 180683485 180683797 -18946353 - AluY SINE Alu 0 311 1 1518 258 87 49 chr5 180683797 180684421 -18945729 + L1M4c LINE L1 1722 2463 -3921 4246 218 44 41 chr5 180684442 180685532 -18944618 + L1M4c LINE L1 2503 3599 -2783 2181 124 3 0 chr5 180685532 180685830 -18944320 + AluSg SINE Alu 1 299 -11 4246 218 44 41 chr5 180685830 180686085 -18944065 + L1M4c LINE L1 3599 3852 -2530 4349 177 31 52 chr5 180686088 180687334 -18942816 + L1MA9 LINE L1 5009 6238 -74 945 251 145 62 chr5 180687594 180688079 -18942071 + HAL1 LINE L1 1036 1479 -1028 1917 28 0 0 chr5 180688079 180688292 -18941858 + AluY SINE Alu 98 310 -1 945 251 145 62 chr5 180688292 180688400 -18941750 + HAL1 LINE L1 1479 1577 -930 2029 147 0 10 chr5 180688400 180688700 -18941450 + AluSx SINE Alu 1 297 -15 945 251 145 62 chr5 180688700 180688830 -18941320 + HAL1 LINE L1 1577 1820 -687 271 390 27 59 chr5 180689025 180689212 -18940938 + L2 LINE L2 3038 3218 -54 191 342 45 18 chr5 180690562 180690673 -18939477 + MIR SINE MIR 48 161 -101 273 276 23 11 chr5 180691084 180691171 -18938979 + L2 LINE L2 3224 3311 -2 306 269 40 86 chr5 180691301 180691476 -18938674 - L2 LINE L2 -1612 1702 1536 2149 87 3 18 chr5 180691608 180691918 -18938232 - AluSx SINE Alu 0 307 2 298 329 42 14 chr5 180691919 180692062 -18938088 - MER69A DNA AcHobo -29 148 2 410 374 7 0 chr5 180692062 180692209 -18937941 + MIR SINE MIR 44 191 -71 22 0 0 0 chr5 180692451 180692473 -18937677 + AT_rich Low_complexity Low_complexity 1 22 0 204 209 0 0 chr5 180692476 180692519 -18937631 + CT-rich Low_complexity Low_complexity 3 45 0 182 228 11 163 chr5 180692766 180692858 -18937292 + L2 LINE L2 3229 3306 -7 261 246 157 30 chr5 180693805 180693939 -18936211 - MIR3 SINE MIR -10 198 48 545 222 87 8 chr5 180694216 180694342 -18935808 - Tigger2a DNA MER2_type 0 444 309 3166 156 29 0 chr5 180694345 180694857 -18935293 + MER1A DNA MER1_type 1 527 0 26 88 0 0 chr5 180695286 180695354 -18934796 + AT_rich Low_complexity Low_complexity 1 68 0 1240 130 29 43 chr5 180695360 180695567 -18934583 - Tigger2a DNA MER2_type -229 205 2 2213 156 10 41 chr5 180696048 180696464 -18933686 - MER57A LTR ERV1 0 403 1 2116 145 0 0 chr5 180696686 180696996 -18933154 + AluSx SINE Alu 1 310 -2 2100 105 7 14 chr5 180697779 180698107 -18932043 - AluSc SINE Alu 0 309 1 419 264 98 23 chr5 180698239 180698438 -18931712 + MIR SINE MIR 54 262 0 252 0 0 0 chr5 180699048 180699076 -18931074 + (T)n Simple_repeat Simple_repeat 1 28 0 2135 113 7 0 chr5 180699374 180699676 -18930474 - AluSq SINE Alu -9 304 1 257 167 0 33 chr5 180700883 180700943 -18929207 + CT-rich Low_complexity Low_complexity 3 60 0 209 156 0 22 chr5 180700980 180701025 -18929125 + CT-rich Low_complexity Low_complexity 3 46 0 347 191 0 11 chr5 180701062 180701151 -18928999 + CT-rich Low_complexity Low_complexity 3 90 0 321 26 0 0 chr5 180701320 180701358 -18928792 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 234 0 0 0 chr5 180701904 180701930 -18928220 + (A)n Simple_repeat Simple_repeat 1 26 0 2318 82 0 7 chr5 180702308 180702611 -18927539 - AluY SINE Alu -9 302 2 2318 236 136 11 chr5 180703253 180703271 -18926879 - L1MC4 LINE L1 -156 7886 7872 2205 102 7 3 chr5 180703271 180703576 -18926574 + AluSp SINE Alu 1 306 -7 2318 236 136 11 chr5 180703576 180704395 -18925755 - L1MC4 LINE L1 -170 7872 6944 242 229 64 73 chr5 180704546 180704655 -18925495 + MLT1K LTR MaLR 147 254 -334 315 240 27 0 chr5 180705007 180705082 -18925068 - MER2 DNA MER2_type 0 345 269 1042 159 11 6 chr5 180705130 180705306 -18924844 - MER2 DNA MER2_type -167 178 2 260 297 121 30 chr5 180706315 180706480 -18923670 + MLT1L LTR MaLR 90 269 -346 234 214 184 58 chr5 180706666 180706769 -18923381 + MLT1K LTR MaLR 455 570 -18 2302 103 0 10 chr5 180706863 180707173 -18922977 - AluSg SINE Alu -1 309 3 453 283 21 29 chr5 180707504 180707685 -18922465 - MER5B DNA MER1_type -3 175 9 231 200 0 18 chr5 180708714 180708769 -18921381 - MIR SINE MIR -18 244 191 23 33 0 0 chr5 180708772 180708802 -18921348 + AT_rich Low_complexity Low_complexity 1 30 0 2314 104 0 0 chr5 180710530 180710838 -18919312 + AluSc SINE Alu 1 308 -1 24 32 0 0 chr5 180711342 180711373 -18918777 + AT_rich Low_complexity Low_complexity 1 31 0 2214 99 11 55 chr5 180711499 180711561 -18918589 - THE1A LTR MaLR -6 349 286 2183 68 0 44 chr5 180711561 180711905 -18918245 + AluY SINE Alu 1 331 0 2214 99 11 55 chr5 180711905 180712205 -18917945 - THE1A LTR MaLR -69 286 2 287 303 64 73 chr5 180713098 180713316 -18916834 - MIR SINE MIR -42 220 5 1772 256 36 14 chr5 180713316 180713809 -18916341 - MLT1D LTR MaLR 0 505 2 315 341 110 6 chr5 180714429 180714611 -18915539 + L2 LINE L2 2430 2630 -684 1618 194 3 3 chr5 180715579 180715873 -18914277 + AluJo SINE Alu 3 296 -16 2235 65 44 0 chr5 180716929 180717238 -18912912 + AluY SINE Alu 1 321 0 1293 188 69 22 chr5 180718090 180718367 -18911783 - AluJb SINE Alu -19 293 4 260 322 96 76 chr5 180719875 180719935 -18910215 + L2 LINE L2 2898 2955 -358 2019 130 3 10 chr5 180719935 180720236 -18909914 + AluSg SINE Alu 1 299 -11 260 322 96 76 chr5 180720236 180720582 -18909568 + L2 LINE L2 2955 3312 -1 21 0 0 0 chr5 180720742 180720763 -18909387 + AT_rich Low_complexity Low_complexity 1 21 0 180 216 59 0 chr5 180720847 180720898 -18909252 - MIR SINE MIR -116 146 93 181 309 15 15 chr5 180721497 180721565 -18908585 - L3 LINE CR1 -564 1013 946 250 320 173 37 chr5 180721574 180721835 -18908315 - L2 LINE L2 -36 3236 2935 512 272 121 25 chr5 180721835 180722074 -18908076 - MIR SINE MIR 0 262 1 238 301 36 0 chr5 180722123 180722206 -18907944 - L3 LINE CR1 -688 889 804 310 230 11 35 chr5 180722439 180722526 -18907624 - MARNA DNA Mariner -291 295 211 282 282 242 32 chr5 180722538 180722790 -18907360 + L2 LINE L2 2888 3192 -121 391 87 0 87 chr5 180722797 180722866 -18907284 - MER3 DNA MER1_type -4 205 143 2997 236 50 9 chr5 180722873 180723787 -18906363 + L1ME1 LINE L1 5119 6152 -14 1184 257 38 13 chr5 180723902 180723974 -18906176 - LTR52 LTR ERVL -3 418 349 330 26 0 0 chr5 180723974 180724013 -18906137 + (CA)n Simple_repeat Simple_repeat 1 39 0 1184 257 38 13 chr5 180724013 180724337 -18905813 - LTR52 LTR ERVL -72 349 12 1946 142 26 14 chr5 180724895 180725247 -18904903 - L1MA3 LINE L1 -105 6200 5845 1393 61 0 0 chr5 180725347 180725527 -18904623 + L1PA4 LINE L1 5976 6155 0 265 306 99 36 chr5 180725578 180725689 -18904461 - L2 LINE L2 -5 3267 3150 3051 180 27 34 chr5 180725959 180726581 -18903569 - L1MB5 LINE L1 -39 6135 5518 23 0 0 0 chr5 180726646 180726669 -18903481 + AT_rich Low_complexity Low_complexity 1 23 0 1219 173 151 0 chr5 180727812 180728090 -18902060 + MER46B DNA MER2_type 1 195 -41 919 308 27 27 chr5 180728194 180728668 -18901482 + L1MC4a LINE L1 5587 6060 -1748 2277 84 0 16 chr5 180731025 180731334 -18898816 - AluY SINE Alu -7 304 1 1573 146 12 113 chr5 180731387 180731556 -18898594 - AluSx SINE Alu 0 302 182 2360 75 3 7 chr5 180731556 180731864 -18898286 - AluY SINE Alu 0 311 5 1573 146 12 113 chr5 180731864 180732030 -18898120 - AluSx SINE Alu -120 182 1 242 314 271 8 chr5 180733888 180734006 -18896144 - MIR3 SINE MIR -23 185 37 181 366 142 0 chr5 180734123 180734257 -18895893 - L2 LINE L2 -1 3271 3119 265 367 45 30 chr5 180734670 180734869 -18895281 - L2 LINE L2 -698 2616 2415 2504 65 0 0 chr5 180734869 180735176 -18894974 - AluY SINE Alu -4 307 1 449 239 74 62 chr5 180735395 180735571 -18894579 - MIR SINE MIR -31 231 54 1607 102 3 109 chr5 180735641 180735934 -18894216 + AluSx SINE Alu 49 310 -2 861 244 85 0 chr5 180738721 180738922 -18891228 - MER58A DNA MER1_type 0 224 7 1493 178 20 27 chr5 180739283 180739576 -18890574 + AluJb SINE Alu 17 307 -5 250 263 12 0 chr5 180739755 180739835 -18890315 + (TA)n Simple_repeat Simple_repeat 1 81 0 574 294 38 16 chr5 180739838 180740022 -18890128 - MIR SINE MIR -62 200 13 29 28 0 0 chr5 180742301 180742337 -18887813 + AT_rich Low_complexity Low_complexity 1 36 0 186 43 0 0 chr5 180743604 180743627 -18886523 + (A)n Simple_repeat Simple_repeat 1 23 0 452 295 69 18 chr5 180743849 180744066 -18886084 + MIR SINE MIR 35 262 0 5600 245 72 45 chr5 180745248 180747342 -18882808 + L1M2b LINE L1 426 3253 -3956 994 230 0 31 chr5 180747343 180747569 -18882581 + AluJo SINE Alu 62 280 -32 9173 184 36 83 chr5 180747642 180750385 -18879765 + L1M2b LINE L1 3286 5899 -1309 297 95 3 108 chr5 180750377 180750442 -18879708 + L1MA5 LINE L1 6242 6303 0 * 1116 292 91 47 chr5 180750465 180751392 -18878758 + L1ME LINE L1 4 1069 -5192 2005 117 3 3 chr5 180751392 180751722 -18878428 + AluSx SINE Alu 1 330 0 1116 292 91 47 chr5 180751722 180751999 -18878151 + L1ME LINE L1 1069 1332 -4929 513 161 0 11 chr5 180752101 180752188 -18877962 - Tigger2a DNA MER2_type -348 86 1 355 273 57 39 chr5 180752205 180752328 -18877822 + L1ME LINE L1 1339 1458 -4701 1932 147 3 3 chr5 180752328 180752628 -18877522 + AluSx SINE Alu 4 303 -9 355 273 57 39 chr5 180752628 180752747 -18877403 + L1ME LINE L1 1458 1628 -4531 235 198 0 25 chr5 180753186 180753267 -18876883 + (TATATG)n Simple_repeat Simple_repeat 5 83 0 1948 85 21 92 chr5 180754496 180754824 -18875326 - AluYb8 SINE Alu -11 307 3 547 241 98 29 chr5 180755813 180755987 -18874163 - MIR SINE MIR 0 262 77 219 304 18 0 chr5 180756347 180756403 -18873747 - MIR SINE MIR -2 260 204 1822 31 0 0 chr5 180757361 180757583 -18872567 - L1PA4 LINE L1 0 6155 5934 354 306 36 9 chr5 180757584 180757695 -18872455 - MIR SINE MIR -142 120 7 425 348 100 0 chr5 180760470 180760680 -18869470 + MIR SINE MIR 32 262 0 394 274 73 37 chr5 180761459 180761623 -18868527 + MIR3 SINE MIR 29 198 -10 216 0 0 0 chr5 180761926 180761950 -18868200 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1862 146 7 3 chr5 180761953 180762241 -18867909 - AluSq SINE Alu -24 289 1 213 370 0 12 chr5 180762330 180762411 -18867739 + L2 LINE L2 3189 3268 -4 949 296 56 30 chr5 180762453 180762885 -18867265 + LTR16A LTR ERVL 1 443 -7 222 339 126 33 chr5 180762892 180763075 -18867075 + L2 LINE L2 2766 2965 -349 533 234 178 37 chr5 180763330 180763422 -18866728 - MIR SINE MIR 0 262 184 1872 154 43 27 chr5 180763422 180763791 -18866359 + THE1C LTR MaLR 1 375 0 533 234 178 37 chr5 180763791 180763912 -18866238 - MIR SINE MIR -78 184 19 23 0 0 0 chr5 180764556 180764579 -18865571 + AT_rich Low_complexity Low_complexity 1 23 0 21 71 0 0 chr5 180766285 180766327 -18863823 + AT_rich Low_complexity Low_complexity 1 42 0 192 40 0 0 chr5 180767856 180767881 -18862269 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2216 107 0 3 chr5 180768029 180768327 -18861823 - AluSc SINE Alu -12 297 1 227 186 0 23 chr5 180768352 180768395 -18861755 + GA-rich Low_complexity Low_complexity 4 45 0 1470 194 0 70 chr5 180769284 180769599 -18860551 + AluJo SINE Alu 6 298 -14 197 277 120 17 chr5 180769793 180769892 -18860258 + MIR SINE MIR 16 118 -91 665 312 18 5 chr5 180771226 180771444 -18858706 - MIR SINE MIR -28 234 14 469 259 167 25 chr5 180771842 180772004 -18858146 + MIR SINE MIR 17 201 -61 36 62 0 0 chr5 180772749 180772813 -18857337 + AT_rich Low_complexity Low_complexity 1 64 0 232 132 38 0 chr5 180774581 180774634 -18855516 + (TTATA)n Simple_repeat Simple_repeat 3 57 0 27 29 0 0 chr5 180775331 180775365 -18854785 + AT_rich Low_complexity Low_complexity 1 34 0 25 65 0 0 chr5 180775735 180775781 -18854369 + AT_rich Low_complexity Low_complexity 1 46 0 249 281 11 45 chr5 180775971 180776060 -18854090 + MLT1E1 LTR MaLR 1 86 -568 * 1308 225 38 88 chr5 180776056 180776509 -18853641 + MLT1E1 LTR MaLR 224 653 -1 2243 164 45 10 chr5 180777055 180777451 -18852699 - MSTB LTR MaLR 0 426 17 2123 110 0 52 chr5 180777713 180778040 -18852110 + AluSp SINE Alu 1 310 -3 461 284 14 27 chr5 180778133 180778281 -18851869 + MIR SINE MIR 89 234 -28 330 87 0 0 chr5 180778600 180778646 -18851504 + (CA)n Simple_repeat Simple_repeat 2 47 0 333 258 37 110 chr5 180778709 180778872 -18851278 + Charlie8 DNA MER1_type 1 151 -2266 749 193 0 21 chr5 180778913 180779058 -18851092 + AluJo SINE Alu 3 144 -168 457 213 11 11 chr5 180779050 180779144 -18851006 - FLAM_A SINE Alu -48 94 1 * 23 33 0 0 chr5 180779238 180779268 -18850882 + AT_rich Low_complexity Low_complexity 1 30 0 32 26 0 0 chr5 180779488 180779527 -18850623 + AT_rich Low_complexity Low_complexity 1 39 0 1813 176 58 21 chr5 180781052 180781338 -18848812 - MLT1B LTR MaLR 0 390 85 2104 138 0 0 chr5 180781338 180781634 -18848516 - AluSp SINE Alu -17 296 1 1813 176 58 21 chr5 180781634 180781723 -18848427 - MLT1B LTR MaLR -305 85 1 24 0 0 0 chr5 180782508 180782532 -18847618 + AT_rich Low_complexity Low_complexity 1 24 0 848 64 0 0 chr5 180783015 180783125 -18847025 - L1PA5 LINE L1 0 6154 6045 28 48 0 0 chr5 180783566 180783608 -18846542 + AT_rich Low_complexity Low_complexity 1 42 0 2620 89 37 8 chr5 180784524 180784906 -18845244 - L1PA11 LINE L1 0 6174 5782 210 143 0 0 chr5 180784910 180784945 -18845205 + (TA)n Simple_repeat Simple_repeat 1 35 0 231 98 0 0 chr5 180784945 180784986 -18845164 + LTR66 LTR ERVL 398 438 -172 7879 144 32 5 chr5 180785006 180786826 -18843324 - L1PA11 LINE L1 -383 5791 3932 6033 155 26 28 chr5 180786821 180788006 -18842144 + L1P LINE L1 2857 4039 -2107 * 331 113 0 0 chr5 180788007 180788060 -18842090 - L1 LINE L1 -1298 4848 4796 614 156 0 0 chr5 180788063 180788172 -18841978 + L1P LINE L1 3867 3975 -2171 343 309 144 18 chr5 180788287 180788565 -18841585 + L1MC4a LINE L1 2703 3015 -3131 29944 118 15 59 chr5 180788613 180795046 -18835104 + L1PA7 LINE L1 12 6151 -3 353 260 139 17 chr5 180795368 180795541 -18834609 + L1MC4a LINE L1 3085 3278 -2868 381 264 81 78 chr5 180795862 180796404 -18833746 + L1MC4a LINE L1 3595 4138 -2008 285 255 29 41 chr5 180796574 180796722 -18833428 + L1MC4a LINE L1 4396 4545 -1601 2204 63 0 46 chr5 180796739 180797024 -18833126 + AluY SINE Alu 3 274 -37 542 68 0 14 chr5 180797125 180797224 -18832926 + AluY SINE Alu 215 312 0 2083 121 0 0 chr5 180797535 180797815 -18832335 - AluSc SINE Alu -29 280 1 2458 254 68 52 chr5 180797963 180798896 -18831254 + L1MC4a LINE L1 4939 4874 -1272 2224 110 3 0 chr5 180798896 180799197 -18830953 + AluY SINE Alu 1 302 -9 2458 254 68 52 chr5 180799197 180799732 -18830418 + L1MC4a LINE L1 4873 5398 -748 6791 172 159 101 chr5 180799794 180801318 -18828832 + L1M4c LINE L1 20 1453 -4929 842 82 7 30 chr5 180801318 180801453 -18828697 - AluYb8 SINE Alu -186 132 1 6791 172 159 101 chr5 180801453 180802155 -18827995 + L1M4c LINE L1 1453 2522 -3860 2405 81 0 7 chr5 180802155 180802463 -18827687 + AluY SINE Alu 1 306 -5 6791 172 159 101 chr5 180802463 180802510 -18827640 + L1M4c LINE L1 2522 2565 -3817 2388 203 42 6 chr5 180802512 180803035 -18827115 + L1MB3 LINE L1 5582 6123 -60 1108 190 20 0 chr5 180803035 180803230 -18826920 + MER2 DNA MER2_type 1 199 -146 24 67 0 0 chr5 180803230 180803275 -18826875 + AT_rich Low_complexity Low_complexity 1 45 0 339 136 0 0 chr5 180803310 180803369 -18826781 + L1MB4 LINE L1 6122 6180 0 1570 198 76 38 chr5 180803393 180803864 -18826286 + L1MB8 LINE L1 5688 6176 -2 24 53 0 0 chr5 180803920 180803958 -18826192 + AT_rich Low_complexity Low_complexity 1 38 0 1474 238 31 22 chr5 180804019 180804464 -18825686 + L1MC4a LINE L1 7359 7807 -1 344 356 132 19 chr5 180806413 180806989 -18823161 - L2 LINE L2 -243 3070 2435 3385 201 14 43 chr5 180807100 180807933 -18822217 + L1MB5 LINE L1 5366 6174 0 189 318 32 0 chr5 180808018 180808062 -18822088 - L2 LINE L2 0 3313 3265 2368 82 0 0 chr5 180808062 180808356 -18821794 + AluY SINE Alu 1 294 -17 189 318 32 0 chr5 180808356 180808374 -18821776 - L2 LINE L2 -48 3265 3249 221 281 0 0 chr5 180808464 180808521 -18821629 + (TA)n Simple_repeat Simple_repeat 1 57 0 226 260 178 30 chr5 180809784 180809953 -18820197 - L2 LINE L2 0 3272 3079 1228 215 102 0 chr5 180810145 180810401 -18819749 + AluJb SINE Alu 1 282 -30 205 389 29 36 chr5 180810727 180810866 -18819284 - L2 LINE L2 -56 3216 3079 210 37 0 0 chr5 180811454 180811481 -18818669 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2077 115 7 3 chr5 180811548 180811843 -18818307 + AluY SINE Alu 1 296 -15 225 245 51 82 chr5 180812168 180812266 -18817884 + MIR SINE MIR 3 97 -165 1411 169 0 115 chr5 180812449 180812787 -18817363 - AluSx SINE Alu -3 299 1 306 259 62 0 chr5 180812792 180812873 -18817277 + MIR SINE MIR 174 259 -3 1699 159 48 15 chr5 180814990 180815323 -18814827 + MER2 DNA MER2_type 1 344 0 408 309 100 56 chr5 180815842 180816091 -18814059 - MIR SINE MIR 0 262 3 28 29 0 0 chr5 180818593 180818628 -18811522 + AT_rich Low_complexity Low_complexity 1 35 0 1133 356 6 80 chr5 180818753 180819079 -18811071 - AluSx SINE Alu 0 302 1 1739 316 110 18 chr5 180819907 180820682 -18809468 + L2 LINE L2 901 1746 -1568 1607 236 50 48 chr5 180820707 180821190 -18808960 + MLT1D LTR MaLR 22 505 0 1471 293 137 29 chr5 180821277 180822519 -18807631 + L2 LINE L2 1944 3309 -4 23 0 0 0 chr5 180822766 180822789 -18807361 + AT_rich Low_complexity Low_complexity 1 23 0 2106 104 0 7 chr5 180825400 180825688 -18804462 + AluSq SINE Alu 1 286 -27 238 341 76 30 chr5 180827622 180827846 -18802304 - MIR SINE MIR -10 252 8 1924 166 0 0 chr5 180828213 180828528 -18801622 - AluSx SINE Alu 0 315 1 2386 101 0 13 chr5 180828984 180829300 -18800850 - AluSx SINE Alu 0 312 1 468 288 123 24 chr5 180829385 180829677 -18800473 + L1ME4a LINE L1 5623 5943 -178 280 296 46 19 chr5 180830084 180830192 -18799958 + MIR3 SINE MIR 96 206 -2 219 167 0 0 chr5 180831149 180831191 -18798959 + (CA)n Simple_repeat Simple_repeat 2 43 0 337 371 55 39 chr5 180832485 180832995 -18797155 - L2 LINE L2 -67 3246 2725 312 260 21 31 chr5 180833023 180833119 -18797031 - L2 LINE L2 -712 2602 2508 278 245 20 10 chr5 180834784 180834886 -18795264 + (TA)n Simple_repeat Simple_repeat 1 103 0 2370 43 4 0 chr5 180836086 180836366 -18793784 - AluY SINE Alu -14 297 17 248 374 65 9 chr5 180837500 180837607 -18792543 + MIR SINE MIR 27 139 -123 314 333 48 26 chr5 180837863 180838052 -18792098 - MIR SINE MIR -14 248 56 195 42 0 0 chr5 180838712 180838736 -18791414 + (T)n Simple_repeat Simple_repeat 1 24 0 369 0 0 0 chr5 180840560 180840601 -18789549 + (TG)n Simple_repeat Simple_repeat 2 42 0 249 287 41 49 chr5 180841229 180841351 -18788799 + MIR SINE MIR 84 204 -58 219 319 0 0 chr5 180841644 180841691 -18788459 - L2 LINE L2 -21 3251 3205 475 279 138 29 chr5 180842338 180842614 -18787536 + MLT1K LTR MaLR 161 466 -122 414 0 0 0 chr5 180844127 180844173 -18785977 + (TA)n Simple_repeat Simple_repeat 1 46 0 403 285 46 8 chr5 180844552 180844682 -18785468 + MIR SINE MIR 43 177 -85 389 293 178 22 chr5 180844698 180844923 -18785227 - MIR SINE MIR 0 262 3 211 208 0 21 chr5 180844951 180844999 -18785151 + (CAT)n Simple_repeat Simple_repeat 2 48 0 26 30 0 0 chr5 180845349 180845382 -18784768 + AT_rich Low_complexity Low_complexity 1 33 0 295 331 176 0 chr5 180847160 180847302 -18782848 - MIR3 SINE MIR 0 208 42 3576 140 13 25 chr5 180847911 180848518 -18781632 + MER4A LTR ERV1 1 600 0 722 213 116 54 chr5 180849640 180849898 -18780252 - MER31B LTR ERV1 0 466 193 1183 193 16 41 chr5 180849909 180850153 -18779997 - AluJb SINE Alu -3 309 72 639 185 0 37 chr5 180850153 180850288 -18779862 - MER31B LTR ERV1 -332 134 5 431 269 34 20 chr5 180850565 180850686 -18779464 + MIR3 SINE MIR 56 180 -28 1799 167 9 43 chr5 180851108 180851460 -18778690 - AluJo SINE Alu 0 341 1 491 282 114 0 chr5 180851804 180851953 -18778197 - MIR3 SINE MIR -6 202 37 270 328 56 60 chr5 180853522 180853754 -18776396 + MIR SINE MIR 29 259 -3 2868 7 0 0 chr5 180854025 180854335 -18775815 + AluYb8 SINE Alu 1 310 -8 1561 217 87 41 chr5 180854771 180855254 -18774896 + MLT1D LTR MaLR 1 505 0 2421 40 0 0 chr5 180855376 180855651 -18774499 - AluY SINE Alu -2 309 35 291 294 101 8 chr5 180856214 180856333 -18773817 + MIR SINE MIR 131 260 -2 555 259 139 0 chr5 180856441 180856536 -18773614 - MER5A DNA MER1_type 0 189 109 2177 129 3 3 chr5 180856536 180856845 -18773305 - AluSx SINE Alu -3 309 1 555 259 139 0 chr5 180856845 180856915 -18773235 - MER5A DNA MER1_type -80 109 1 779 269 55 58 chr5 180857784 180858145 -18772005 - MLT1A1 LTR MaLR -5 360 1 1331 204 41 4 chr5 180858241 180858511 -18771639 + Tigger7 DNA MER2_type 1 280 -453 968 197 0 0 chr5 180858508 180858696 -18771454 + Tigger7 DNA MER2_type 2300 2487 0 * 21 0 0 0 chr5 180858773 180858794 -18771356 + AT_rich Low_complexity Low_complexity 1 21 0 649 76 61 0 chr5 180858898 180859029 -18771121 + (CA)n Simple_repeat Simple_repeat 2 140 0 211 366 81 24 chr5 180859322 180859445 -18770705 + L2 LINE L2 3133 3262 -10 2807 106 19 5 chr5 180860531 180860957 -18769193 + MLT2A1 LTR ERVL 1 432 -12 217 356 50 78 chr5 180861260 180861642 -18768508 - L2 LINE L2 -5 3267 2897 1232 156 5 24 chr5 180862284 180862489 -18767661 + AluJb SINE Alu 87 287 -25 499 355 0 5 chr5 180862525 180862722 -18767428 - MIR SINE MIR 0 262 67 22 56 0 0 chr5 180862753 180862789 -18767361 + AT_rich Low_complexity Low_complexity 1 36 0 184 290 20 80 chr5 180862855 180862955 -18767195 - MIR SINE MIR -54 208 115 1156 247 27 62 chr5 180862981 180863110 -18767040 + MLT1D LTR MaLR 6 138 -367 2119 132 0 22 chr5 180863110 180863421 -18766729 - AluSx SINE Alu -6 306 3 1156 247 27 62 chr5 180863421 180863809 -18766341 + MLT1D LTR MaLR 138 505 0 1850 186 0 3 chr5 180863870 180864176 -18765974 + AluSx SINE Alu 1 305 -7 249 351 9 0 chr5 180865426 180865540 -18764610 + L1MDa LINE L1 35 149 -6391 1203 276 50 35 chr5 180865929 180866696 -18763454 + L1MDa LINE L1 1773 2550 -3990 * 2561 82 7 2 chr5 180866690 180867106 -18763044 + L1PA11 LINE L1 5509 6066 -108 1276 120 0 0 chr5 180867110 180867302 -18762848 + L1P3 LINE L1 11 202 -6259 11077 48 6 0 chr5 180867307 180869452 -18760698 + L1PA6 LINE L1 3988 6139 -15 878 83 0 0 chr5 180869467 180869587 -18760563 + L1PA11 LINE L1 6055 6174 0 395 289 27 27 chr5 180869590 180869846 -18760304 + L1MDa LINE L1 2541 2796 -3744 1015 175 13 0 chr5 180869979 180870496 -18759654 + ALR/Alpha Satellite centromeric 1 523 -13 1001 166 10 0 chr5 180870509 180871172 -18758978 + ALR/Alpha Satellite centromeric 1 669 -13 983 172 10 0 chr5 180871185 180871847 -18758303 + ALR/Alpha Satellite centromeric 1 668 -13 1066 162 5 0 chr5 180871860 180873207 -18756943 + ALR/Alpha Satellite centromeric 1 1354 -13 957 170 12 0 chr5 180873220 180873882 -18756268 + ALR/Alpha Satellite centromeric 1 669 -13 1068 163 5 0 chr5 180873895 180875242 -18754908 + ALR/Alpha Satellite centromeric 1 1354 -13 957 172 12 0 chr5 180875255 180875917 -18754233 + ALR/Alpha Satellite centromeric 1 669 -13 955 173 12 0 chr5 180875930 180876592 -18753558 + ALR/Alpha Satellite centromeric 1 669 -13 1066 160 7 0 chr5 180876605 180877952 -18752198 + ALR/Alpha Satellite centromeric 1 1356 -13 957 173 12 0 chr5 180877965 180878627 -18751523 + ALR/Alpha Satellite centromeric 1 669 -13 1080 166 5 0 chr5 180878640 180879987 -18750163 + ALR/Alpha Satellite centromeric 1 1354 -13 957 170 12 0 chr5 180880000 180880662 -18749488 + ALR/Alpha Satellite centromeric 1 669 -13 1068 157 5 0 chr5 180880675 180882022 -18748128 + ALR/Alpha Satellite centromeric 1 1354 -13 957 174 10 0 chr5 180882035 180882697 -18747453 + ALR/Alpha Satellite centromeric 1 668 -13 1068 156 5 0 chr5 180882710 180884057 -18746093 + ALR/Alpha Satellite centromeric 1 1354 -13 957 170 12 0 chr5 180884070 180884732 -18745418 + ALR/Alpha Satellite centromeric 1 669 -13 1068 156 5 0 chr5 180884745 180886092 -18744058 + ALR/Alpha Satellite centromeric 1 1354 -13 932 173 10 0 chr5 180886105 180886767 -18743383 + ALR/Alpha Satellite centromeric 1 668 -13 1068 159 5 0 chr5 180886780 180888127 -18742023 + ALR/Alpha Satellite centromeric 1 1354 -13 957 171 12 0 chr5 180888140 180888802 -18741348 + ALR/Alpha Satellite centromeric 1 669 -13 1048 161 5 0 chr5 180888815 180890162 -18739988 + ALR/Alpha Satellite centromeric 1 1354 -13 957 173 12 0 chr5 180890175 180890837 -18739313 + ALR/Alpha Satellite centromeric 1 669 -13 1066 157 5 0 chr5 180890850 180892197 -18737953 + ALR/Alpha Satellite centromeric 1 1354 -13 957 170 12 0 chr5 180892210 180892872 -18737278 + ALR/Alpha Satellite centromeric 1 669 -13 1068 158 5 0 chr5 180892885 180894232 -18735918 + ALR/Alpha Satellite centromeric 1 1354 -13 957 173 10 0 chr5 180894245 180894907 -18735243 + ALR/Alpha Satellite centromeric 1 668 -13 1066 154 5 0 chr5 180894920 180896316 -18733834 + ALR/Alpha Satellite centromeric 1 1403 -13 955 171 12 0 chr5 180896329 180896991 -18733159 + ALR/Alpha Satellite centromeric 1 669 -13 1055 160 6 0 chr5 180897004 180898350 -18731800 + ALR/Alpha Satellite centromeric 1 1353 -13 957 167 10 0 chr5 180898363 180898690 -18731460 + ALR/Alpha Satellite centromeric 1 330 -11 906 175 12 0 chr5 180898701 180899025 -18731125 + ALR/Alpha Satellite centromeric 1 327 -13 1066 159 5 0 chr5 180899038 180900385 -18729765 + ALR/Alpha Satellite centromeric 1 1354 -13 957 172 12 0 chr5 180900398 180901060 -18729090 + ALR/Alpha Satellite centromeric 1 669 -13 1068 159 7 0 chr5 180901073 180902078 -18728072 + ALR/Alpha Satellite centromeric 1 1011 -13 957 173 12 0 chr5 180902091 180902753 -18727397 + ALR/Alpha Satellite centromeric 1 669 -13 1092 163 5 0 chr5 180902766 180904113 -18726037 + ALR/Alpha Satellite centromeric 1 1354 -13 1037 163 7 0 chr5 180904126 180905131 -18725019 + ALR/Alpha Satellite centromeric 1 1011 -13 957 173 10 0 chr5 180905144 180905806 -18724344 + ALR/Alpha Satellite centromeric 1 668 -13 1068 165 5 0 chr5 180905819 180907166 -18722984 + ALR/Alpha Satellite centromeric 1 1354 -13 957 174 12 0 chr5 180907179 180907841 -18722309 + ALR/Alpha Satellite centromeric 1 669 -13 1068 158 5 0 chr5 180907854 180909201 -18720949 + ALR/Alpha Satellite centromeric 1 1354 -13 955 171 12 0 chr5 180909214 180909876 -18720274 + ALR/Alpha Satellite centromeric 1 669 -13 1066 161 5 0 chr5 180909889 180911236 -18718914 + ALR/Alpha Satellite centromeric 1 1354 -13 957 172 10 0 chr5 180911249 180911911 -18718239 + ALR/Alpha Satellite centromeric 1 668 -13 1068 162 5 0 chr5 180911924 180913271 -18716879 + ALR/Alpha Satellite centromeric 1 1354 -13 957 170 12 0 chr5 180913284 180913946 -18716204 + ALR/Alpha Satellite centromeric 1 669 -13 957 172 12 0 chr5 180913959 180914621 -18715529 + ALR/Alpha Satellite centromeric 1 669 -13 1066 158 5 0 chr5 180914634 180915981 -18714169 + ALR/Alpha Satellite centromeric 1 1354 -13 957 172 12 0 chr5 180915994 180916656 -18713494 + ALR/Alpha Satellite centromeric 1 669 -13 1090 159 5 0 chr5 180916669 180918016 -18712134 + ALR/Alpha Satellite centromeric 1 1354 -13 957 173 12 0 chr5 180918029 180918691 -18711459 + ALR/Alpha Satellite centromeric 1 669 -13 1066 157 5 0 chr5 180918704 180920051 -18710099 + ALR/Alpha Satellite centromeric 1 1354 -13 955 173 12 2 chr5 180920064 180920726 -18709424 + ALR/Alpha Satellite centromeric 1 668 -13 920 175 10 0 chr5 180920739 180921401 -18708749 + ALR/Alpha Satellite centromeric 1 668 -13 1052 167 8 0 chr5 180921414 180923435 -18706715 + ALR/Alpha Satellite centromeric 1 2036 -13 1080 157 5 0 chr5 180923448 180924795 -18705355 + ALR/Alpha Satellite centromeric 1 1354 -13 957 174 12 0 chr5 180924808 180925470 -18704680 + ALR/Alpha Satellite centromeric 1 669 -13 1068 165 6 0 chr5 180925483 180927170 -18702980 + ALR/Alpha Satellite centromeric 1 1697 -11 906 177 12 0 chr5 180927181 180927505 -18702645 + ALR/Alpha Satellite centromeric 1 327 -13 1084 159 7 0 chr5 180927518 180928865 -18701285 + ALR/Alpha Satellite centromeric 1 1356 -13 941 178 10 0 chr5 180928878 180929540 -18700610 + ALR/Alpha Satellite centromeric 1 668 -13 1068 158 5 0 chr5 180929553 180930900 -18699250 + ALR/Alpha Satellite centromeric 1 1354 -13 932 173 12 0 chr5 180930913 180931575 -18698575 + ALR/Alpha Satellite centromeric 1 669 -13 1068 161 5 0 chr5 180931588 180932935 -18697215 + ALR/Alpha Satellite centromeric 1 1354 -13 1001 167 10 0 chr5 180932948 180933611 -18696539 + ALR/Alpha Satellite centromeric 1 669 -13 1068 162 7 0 chr5 180933624 180934629 -18695521 + ALR/Alpha Satellite centromeric 1 1011 -13 935 171 12 0 chr5 180934642 180935304 -18694846 + ALR/Alpha Satellite centromeric 1 669 -13 1068 165 5 0 chr5 180935317 180937344 -18692806 + ALR/Alpha Satellite centromeric 1 2037 -13 955 170 12 0 chr5 180937357 180938019 -18692131 + ALR/Alpha Satellite centromeric 1 669 -13 1068 156 4 0 chr5 180938032 180939140 -18691010 + ALR/Alpha Satellite centromeric 1 1112 0 488 254 58 36 chr5 180989284 180989422 -18640728 - MIR SINE MIR 0 262 122 2271 89 10 3 chr5 180989755 180990059 -18640091 - AluY SINE Alu -5 306 1 388 290 27 32 chr5 180991361 180991547 -18638603 - L2 LINE L2 -2229 1085 901 1951 156 3 19 chr5 180992375 180992683 -18637467 + AluSx SINE Alu 1 303 -9 28 29 0 0 chr5 180992807 180992842 -18637308 + AT_rich Low_complexity Low_complexity 1 35 0 2213 191 47 6 chr5 180994689 180995161 -18634989 - L1MB3 LINE L1 -111 6308 5818 6791 172 159 101 chr5 180995163 180995210 -18634940 - L1MB3 LINE L1 -3817 2565 2522 2405 81 0 7 chr5 180995210 180995518 -18634632 - AluY SINE Alu -5 306 1 6791 172 159 101 chr5 180995518 180996220 -18633930 - L1MB3 LINE L1 -3860 2522 1863 842 82 7 30 chr5 180996220 180996355 -18633795 + AluYb8 SINE Alu 1 132 -186 6791 172 159 101 chr5 180996355 180997879 -18632271 - L1MB3 LINE L1 -4519 1863 20 2458 254 68 52 chr5 180997941 180998476 -18631674 - L1MC4a LINE L1 -748 5398 5854 2247 113 0 0 chr5 180998476 180998778 -18631372 - AluY SINE Alu -9 302 1 2458 254 68 52 chr5 180998778 180999711 -18630439 - L1MC4a LINE L1 -291 5855 4939 2083 121 0 0 chr5 180999859 181000139 -18630011 + AluSc SINE Alu 1 280 -29 2301 64 0 44 chr5 181000449 181000771 -18629379 - AluY SINE Alu 0 311 3 285 303 30 0 chr5 181000788 181000920 -18629230 - L1MC4a LINE L1 -1601 4545 4410 404 265 79 77 chr5 181001106 181001649 -18628501 - L1MC4a LINE L1 -2008 4138 3595 353 260 139 17 chr5 181001970 181002143 -18628007 - L1MC4a LINE L1 -2868 3278 3085 15774 96 20 3 chr5 181002465 181005575 -18624575 - L1PA7 LINE L1 -3 6151 2999 16217 139 11 104 chr5 181005728 181009369 -18620781 - L1P LINE L1 -2831 3315 12 343 309 144 18 chr5 181009417 181009695 -18620455 - L1MC4a LINE L1 -3131 3015 2703 614 156 0 0 chr5 181009810 181009919 -18620231 - L1P LINE L1 -2171 3975 3867 331 113 0 0 chr5 181009922 181009975 -18620175 + L1 LINE L1 4796 4848 -1298 6033 155 26 28 chr5 181009976 181011161 -18618989 - L1P LINE L1 -2107 4039 2857 * 7879 144 32 5 chr5 181011156 181012976 -18617174 + L1PA11 LINE L1 3932 5791 -383 341 131 16 0 chr5 181013018 181013079 -18617071 + (TA)n Simple_repeat Simple_repeat 1 62 0 2602 87 39 8 chr5 181013083 181013464 -18616686 + L1PA11 LINE L1 5782 6174 0 28 48 0 0 chr5 181014380 181014422 -18615728 + AT_rich Low_complexity Low_complexity 1 42 0 848 64 0 0 chr5 181014863 181014973 -18615177 + L1PA5 LINE L1 6045 6154 0 24 0 0 0 chr5 181015456 181015480 -18614670 + AT_rich Low_complexity Low_complexity 1 24 0 1847 170 58 24 chr5 181016265 181016354 -18613796 + MLT1B LTR MaLR 1 85 -305 2104 138 0 0 chr5 181016354 181016650 -18613500 + AluSp SINE Alu 1 296 -17 1847 170 58 24 chr5 181016650 181016937 -18613213 + MLT1B LTR MaLR 85 390 0 32 26 0 0 chr5 181018461 181018500 -18611650 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr5 181018720 181018750 -18611400 + AT_rich Low_complexity Low_complexity 1 30 0 457 213 11 11 chr5 181018844 181018938 -18611212 + FLAM_A SINE Alu 1 94 -48 * 749 193 0 21 chr5 181018930 181019075 -18611075 - AluJo SINE Alu -168 144 3 333 258 37 110 chr5 181019115 181019278 -18610872 - Charlie8 DNA MER1_type -2266 151 1 330 87 0 0 chr5 181019341 181019387 -18610763 + (TG)n Simple_repeat Simple_repeat 2 47 0 461 284 14 27 chr5 181019706 181019854 -18610296 - MIR SINE MIR -28 234 89 290 173 0 53 chr5 181019951 181020026 -18610124 - AluSp/q SINE Alu -2 301 231 1029 143 31 6 chr5 181020138 181020299 -18609851 - AluJb SINE Alu -131 181 17 861 244 85 0 chr5 181020663 181020864 -18609286 + MER58A DNA MER1_type 7 224 0 1608 97 7 107 chr5 181023672 181023962 -18606188 - AluSx SINE Alu -3 309 49 443 239 74 62 chr5 181024032 181024208 -18605942 + MIR SINE MIR 54 231 -31 2521 68 0 0 chr5 181024427 181024735 -18605415 + AluY SINE Alu 1 308 -3 267 367 45 30 chr5 181024735 181024934 -18605216 + L2 LINE L2 2415 2616 -698 239 314 271 8 chr5 181025598 181025716 -18604434 + MIR3 SINE MIR 37 185 -23 376 257 62 18 chr5 181026151 181026264 -18603886 - MIR SINE MIR -73 189 72 500 172 255 0 chr5 181026273 181026430 -18603720 - ORSL DNA AcHobo 0 275 79 2381 74 0 16 chr5 181028184 181028493 -18601657 - AluY SINE Alu -7 304 1 1615 146 15 98 chr5 181028546 181028708 -18601442 - AluSx SINE Alu -11 301 178 2382 72 3 7 chr5 181028708 181029013 -18601137 - AluY SINE Alu -3 308 5 1615 146 15 98 chr5 181029013 181029178 -18600972 - AluSx SINE Alu -134 178 1 1308 185 77 57 chr5 181031356 181031707 -18598443 - MLT1C LTR MaLR -8 459 102 364 323 101 52 chr5 181032429 181032677 -18597473 + MIR SINE MIR 3 262 0 1698 159 48 15 chr5 181033196 181033529 -18596621 - MER2 DNA MER2_type 0 344 1 306 259 62 0 chr5 181035646 181035727 -18594423 - MIR SINE MIR -3 259 174 1411 169 0 115 chr5 181035732 181036070 -18594080 + AluSx SINE Alu 1 299 -3 225 245 51 82 chr5 181036253 181036351 -18593799 - MIR SINE MIR -165 97 3 2077 115 7 3 chr5 181036676 181036971 -18593179 - AluY SINE Alu -15 296 1 210 37 0 0 chr5 181037038 181037065 -18593085 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 205 389 29 36 chr5 181037653 181037792 -18592358 + L2 LINE L2 3079 3216 -56 1228 215 102 0 chr5 181038118 181038374 -18591776 - AluJb SINE Alu -30 282 1 226 260 178 30 chr5 181038566 181038735 -18591415 + L2 LINE L2 3079 3272 0 221 281 0 0 chr5 181039998 181040055 -18590095 + (TA)n Simple_repeat Simple_repeat 1 57 0 189 318 32 0 chr5 181040145 181040163 -18589987 + L2 LINE L2 3249 3265 -48 2368 82 0 0 chr5 181040163 181040457 -18589693 - AluY SINE Alu -17 294 1 189 318 32 0 chr5 181040457 181040501 -18589649 + L2 LINE L2 3265 3313 0 3385 201 14 43 chr5 181040586 181041419 -18588731 - L1MB5 LINE L1 0 6174 5366 344 356 132 19 chr5 181041530 181042106 -18588044 + L2 LINE L2 2435 3070 -243 1474 238 31 22 chr5 181044055 181044500 -18585650 - L1MC4a LINE L1 -1 7807 7359 24 53 0 0 chr5 181044561 181044599 -18585551 + AT_rich Low_complexity Low_complexity 1 38 0 1570 198 76 38 chr5 181044655 181045126 -18585024 - L1MB8 LINE L1 -2 6176 5688 339 136 0 0 chr5 181045150 181045209 -18584941 - L1MB4 LINE L1 0 6180 6122 24 67 0 0 chr5 181045244 181045289 -18584861 + AT_rich Low_complexity Low_complexity 1 45 0 1098 181 21 0 chr5 181045289 181045477 -18584673 - MER2 DNA MER2_type -146 199 8 1148 147 21 0 chr5 181045584 181045774 -18584376 - AluSp SINE Alu -119 194 1 2243 164 45 10 chr5 181046034 181046430 -18583720 + MSTB LTR MaLR 17 426 0 1308 225 38 88 chr5 181046976 181047429 -18582721 - MLT1E1 LTR MaLR -1 653 224 249 281 11 45 chr5 181047425 181047514 -18582636 - MLT1E1 LTR MaLR -568 86 1 * 25 65 0 0 chr5 181047704 181047750 -18582400 + AT_rich Low_complexity Low_complexity 1 46 0 27 29 0 0 chr5 181048119 181048153 -18581997 + AT_rich Low_complexity Low_complexity 1 34 0 232 132 38 0 chr5 181048849 181048902 -18581248 + (TATAA)n Simple_repeat Simple_repeat 3 57 0 36 62 0 0 chr5 181050670 181050734 -18579416 + AT_rich Low_complexity Low_complexity 1 64 0 468 259 167 25 chr5 181051480 181051642 -18578508 - MIR SINE MIR -61 201 17 665 298 23 9 chr5 181052039 181052257 -18577893 + MIR SINE MIR 14 234 -28 197 277 120 17 chr5 181053591 181053690 -18576460 - MIR SINE MIR -91 118 16 1485 194 0 70 chr5 181053884 181054199 -18575951 - AluJo SINE Alu -14 298 6 227 186 0 23 chr5 181055088 181055131 -18575019 + CT-rich Low_complexity Low_complexity 4 45 0 2262 104 0 3 chr5 181055156 181055454 -18574696 + AluSc SINE Alu 1 297 -12 192 40 0 0 chr5 181055602 181055627 -18574523 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 21 71 0 0 chr5 181057156 181057198 -18572952 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr5 181058904 181058927 -18571223 + AT_rich Low_complexity Low_complexity 1 23 0 535 234 178 37 chr5 181059571 181059692 -18570458 + MIR SINE MIR 19 122 -140 1891 154 43 27 chr5 181059692 181060061 -18570089 - THE1C LTR MaLR 0 375 1 535 234 178 37 chr5 181060061 181060153 -18569997 + MIR SINE MIR 122 262 0 226 339 126 33 chr5 181060408 181060591 -18569559 - L2 LINE L2 -349 2965 2766 967 296 56 30 chr5 181060598 181061030 -18569120 - LTR16A LTR ERVL -7 443 1 207 370 0 12 chr5 181061072 181061153 -18568997 - L2 LINE L2 -4 3268 3189 1879 142 7 7 chr5 181061242 181061531 -18568619 + AluSq SINE Alu 1 289 -24 216 0 0 0 chr5 181061534 181061558 -18568592 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 390 274 73 37 chr5 181061861 181062025 -18568125 - MIR3 SINE MIR -10 198 29 429 348 100 0 chr5 181062804 181063014 -18567136 - MIR SINE MIR 0 262 32 354 306 36 9 chr5 181065789 181065900 -18564250 + MIR SINE MIR 7 120 -142 1832 31 0 0 chr5 181065901 181066123 -18564027 + L1PA4 LINE L1 5934 6155 0 220 304 18 0 chr5 181067076 181067132 -18563018 + MIR SINE MIR 204 260 -2 545 241 98 29 chr5 181067492 181067666 -18562484 + MIR SINE MIR 77 262 0 1985 85 21 92 chr5 181068655 181068983 -18561167 + AluYb8 SINE Alu 3 307 -11 227 200 0 15 chr5 181070228 181070293 -18559857 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 1046 300 95 46 chr5 181070732 181070851 -18559299 - L1ME LINE L1 -4633 1628 1516 1960 147 3 3 chr5 181070851 181071151 -18558999 - AluSx SINE Alu -9 303 4 1046 300 95 46 chr5 181071151 181071291 -18558859 - L1ME LINE L1 -4745 1516 1384 1844 168 71 43 chr5 181071291 181071713 -18558437 + Tigger2a DNA MER2_type 1 434 0 1046 300 95 46 chr5 181071713 181072021 -18558129 - L1ME LINE L1 -4877 1384 1092 2038 117 3 3 chr5 181072021 181072351 -18557799 - AluSx SINE Alu 0 330 1 1046 300 95 46 chr5 181072351 181073277 -18556873 - L1ME LINE L1 -5169 1092 4 291 132 0 0 chr5 181073307 181073360 -18556790 - L1MA6 LINE L1 0 6300 6248 * 7995 173 35 132 chr5 181073357 181076251 -18553899 - L1 LINE L1 -1309 5899 3286 1013 230 0 31 chr5 181076324 181076550 -18553600 - AluJo SINE Alu -32 280 62 5577 242 75 47 chr5 181076551 181078645 -18551505 - L1 LINE L1 -3956 3253 426 442 295 69 18 chr5 181079827 181080044 -18550106 - MIR SINE MIR 0 262 35 186 43 0 0 chr5 181080266 181080289 -18549861 + (T)n Simple_repeat Simple_repeat 1 23 0 29 28 0 0 chr5 181081556 181081592 -18548558 + AT_rich Low_complexity Low_complexity 1 36 0 233 130 0 0 chr5 181082853 181082899 -18547251 + LTR66 LTR ERVL 394 439 -171 309 261 0 34 chr5 181082901 181082989 -18547161 + L1MC4 LINE L1 6640 6724 -1318 210 325 44 35 chr5 181083012 181083126 -18547024 + L2 LINE L2 3142 3256 -16 202 154 26 0 chr5 181083229 181083268 -18546882 + (TA)n Simple_repeat Simple_repeat 1 40 0 361 324 157 22 chr5 181083368 181083553 -18546597 - MIR SINE MIR -1 261 52 312 297 159 47 chr5 181084646 181084942 -18545208 - L2 LINE L2 -16 3297 2969 2167 96 6 25 chr5 181085042 181085356 -18544794 - AluSc SINE Alu -1 308 1 982 303 83 29 chr5 181086579 181087164 -18542986 - L2 LINE L2 0 3313 2696 672 275 64 38 chr5 181087405 181087747 -18542403 - L1MC4a LINE L1 -1924 5884 5534 240 275 0 46 chr5 181087792 181087901 -18542249 - L1MC4a LINE L1 -777 5397 5294 1353 289 171 46 chr5 181088031 181088148 -18542002 - L2 LINE L2 -605 2709 2608 2261 68 3 3 chr5 181088148 181088442 -18541708 + AluY SINE Alu 1 294 -17 1353 289 171 46 chr5 181088442 181089110 -18541040 - L2 LINE L2 -706 2608 1826 420 241 70 32 chr5 181089112 181089270 -18540880 - L2 LINE L2 -1626 1688 1525 1227 339 42 17 chr5 181089274 181089852 -18540298 - L2 LINE L2 -2109 1205 614 297 0 0 0 chr5 181091079 181091112 -18539038 + (CA)n Simple_repeat Simple_repeat 2 34 0 297 0 0 0 chr5 181091111 181091144 -18539006 + (GA)n Simple_repeat Simple_repeat 2 34 0 24 32 0 0 chr5 181091680 181091711 -18538439 + AT_rich Low_complexity Low_complexity 1 31 0 1468 246 50 11 chr5 181092854 181093318 -18536832 + L1MB3 LINE L1 4650 5131 -1015 1825 153 83 57 chr5 181093343 181093730 -18536420 + MSTA LTR MaLR 5 401 -27 1298 176 153 0 chr5 181093731 181094028 -18536122 - AluJb SINE Alu 0 337 1 835 121 0 28 chr5 181094054 181094195 -18535955 - AluSg/x SINE Alu -8 302 166 4486 162 65 7 chr5 181094205 181095094 -18535056 + L1MA8 LINE L1 5332 6272 -19 835 207 56 0 chr5 181095258 181095563 -18534587 + L1MB3 LINE L1 5764 6180 -3 225 97 0 113 chr5 181095685 181095747 -18534403 - L1MC4 LINE L1 -1335 6707 6653 247 230 14 14 chr5 181095994 181096068 -18534082 + L1ME LINE L1 5743 5816 -350 24 32 0 0 chr5 181096156 181096187 -18533963 + AT_rich Low_complexity Low_complexity 1 31 0 194 62 31 0 chr5 181096209 181096241 -18533909 + (TA)n Simple_repeat Simple_repeat 2 34 0 2857 3 0 0 chr5 181096506 181096817 -18533333 + AluYa5 SINE Alu 1 311 0 26 64 0 0 chr5 181098075 181098122 -18532028 + AT_rich Low_complexity Low_complexity 1 47 0 2277 52 10 3 chr5 181098402 181098691 -18531459 - AluY SINE Alu -20 291 1 187 282 10 48 chr5 181098713 181098816 -18531334 + L3 LINE CR1 1356 1454 -123 222 128 0 0 chr5 181099994 181100033 -18530117 + (A)n Simple_repeat Simple_repeat 1 39 0 27 29 0 0 chr5 181101273 181101307 -18528843 + AT_rich Low_complexity Low_complexity 1 34 0 592 297 31 5 chr5 181102122 181102317 -18527833 - MIR SINE MIR 0 262 63 220 370 101 40 chr5 181104023 181104301 -18525849 - L2 LINE L2 -4 3268 2974 340 0 80 0 chr5 181104679 181104729 -18525421 + T-rich Low_complexity Low_complexity 2 55 0 1897 124 3 3 chr5 181104745 181105027 -18525123 - AluSx SINE Alu -30 282 1 249 83 0 0 chr5 181110359 181110395 -18519755 + (T)n Simple_repeat Simple_repeat 1 36 0 2525 48 0 16 chr5 181111528 181111844 -18518306 + AluY SINE Alu 1 311 0 1878 135 3 10 chr5 181111852 181112149 -18518001 + AluSx SINE Alu 1 295 -17 243 0 0 0 chr5 181113156 181113183 -18516967 + (T)n Simple_repeat Simple_repeat 1 27 0 2006 140 10 0 chr5 181113538 181113831 -18516319 - AluSx SINE Alu -16 296 1 222 37 0 0 chr5 181113882 181113909 -18516241 + (T)n Simple_repeat Simple_repeat 1 27 0 261 232 92 128 chr5 181114026 181114190 -18515960 + L2 LINE L2 3156 3313 0 387 330 63 18 chr5 181114398 181114723 -18515427 - L1ME LINE L1 -508 5654 5314 21 0 0 0 chr5 181114766 181114787 -18515363 + AT_rich Low_complexity Low_complexity 1 21 0 258 290 56 81 chr5 181114813 181115172 -18514978 - L1ME LINE L1 -912 5234 4885 1030 287 106 57 chr5 181115384 181115924 -18514226 - MLT1E2 LTR MaLR 0 654 60 292 279 55 6 chr5 181115988 181116153 -18513997 - L1ME LINE L1 -1493 4653 4481 * 11790 203 47 32 chr5 181116143 181117069 -18513081 - L1MA4 LINE L1 0 6482 5571 195 69 0 0 chr5 181117069 181117098 -18513052 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1958 113 0 31 chr5 181117100 181117392 -18512758 - AluSq SINE Alu -30 283 1 11790 203 47 32 chr5 181117392 181120860 -18509290 - L1MA4 LINE L1 -911 5571 1968 1423 199 32 35 chr5 181120860 181121171 -18508979 + AluJo SINE Alu 3 312 0 11790 203 47 32 chr5 181121171 181123168 -18506982 - L1MA4 LINE L1 -4514 1968 1 1715 253 89 74 chr5 181123544 181124259 -18505891 - MER21B LTR ERV1 -129 734 9 331 185 19 0 chr5 181124261 181124315 -18505835 + Tigger5 DNA MER2_type 1 55 -2268 414 207 23 0 chr5 181124322 181124409 -18505741 + Tigger5 DNA MER2_type 2234 2322 -1 248 77 26 0 chr5 181124426 181124465 -18505685 + (TG)n Simple_repeat Simple_repeat 1 40 0 1492 181 37 12 chr5 181124468 181124789 -18505361 - L1MB2 LINE L1 -24 6147 5819 420 332 113 3 chr5 181124821 181125176 -18504974 - L1ME LINE L1 -2146 4000 3607 9462 184 70 31 chr5 181125239 181125437 -18504713 + L1MB3 LINE L1 2 191 -6193 2165 110 3 13 chr5 181125437 181125746 -18504404 - AluSq SINE Alu -7 306 1 9462 184 70 31 chr5 181125746 181127815 -18502335 + L1MB3 LINE L1 191 2359 -4025 2022 226 25 33 chr5 181127806 181127910 -18502240 + L1MB3 LINE L1 4598 4701 -1681 * 1604 162 8 0 chr5 181127910 181128169 -18501981 + AluSx SINE Alu 48 308 -4 2022 226 25 33 chr5 181128169 181128634 -18501516 + L1MB3 LINE L1 4701 5162 -1220 622 240 7 0 chr5 181129016 181129166 -18500984 + L1MB3 LINE L1 5125 5275 -1107 3329 190 76 11 chr5 181129267 181130057 -18500093 + L1MB3 LINE L1 5566 6406 -13 370 298 87 17 chr5 181130376 181130892 -18499258 - L1ME LINE L1 -2925 3221 2670 1887 130 38 38 chr5 181131481 181131850 -18498300 + L1MA9 LINE L1 5791 6159 -153 416 130 39 0 chr5 181131897 181131974 -18498176 + L1MA9 LINE L1 6163 6242 -70 25 0 0 0 chr5 181132065 181132090 -18498060 + AT_rich Low_complexity Low_complexity 1 25 0 1304 224 0 53 chr5 181132090 181132389 -18497761 - AluJo SINE Alu -19 283 1 781 214 124 7 chr5 181132485 181132775 -18497375 + MER33 DNA MER1_type 1 324 0 2990 184 64 0 chr5 181133233 181133888 -18496262 - L1M1 LINE L1 -6681 884 16 366 238 53 127 chr5 181133920 181134164 -18495986 + L2 LINE L2 3081 3306 -7 1825 153 0 3 chr5 181134397 181134702 -18495448 - AluSx SINE Alu 0 304 1 23 78 0 0 chr5 181134772 181134823 -18495327 + AT_rich Low_complexity Low_complexity 1 51 0 24 53 0 0 chr5 181135320 181135358 -18494792 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr5 181135532 181135561 -18494589 + AT_rich Low_complexity Low_complexity 1 29 0 269 323 51 78 chr5 181135570 181135787 -18494363 + MIR SINE MIR 52 262 0 21 0 0 0 chr5 181136220 181136241 -18493909 + AT_rich Low_complexity Low_complexity 1 21 0 446 315 34 7 chr5 181137307 181137453 -18492697 + MIR SINE MIR 8 157 -105 514 261 161 11 chr5 181137665 181137845 -18492305 + MIR SINE MIR 5 211 -51 2156 114 0 0 chr5 181137848 181138146 -18492004 + AluY SINE Alu 1 298 -13 2277 80 0 13 chr5 181138242 181138556 -18491594 + AluY SINE Alu 1 310 -1 180 0 0 0 chr5 181139451 181139471 -18490679 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2338 83 0 0 chr5 181139475 181139775 -18490375 - AluSc SINE Alu -6 303 4 244 0 0 53 chr5 181140001 181140039 -18490111 + (CA)n Simple_repeat Simple_repeat 2 37 0 1870 104 0 11 chr5 181140227 181140496 -18489654 + AluY SINE Alu 41 306 -5 22 0 0 0 chr5 181141632 181141654 -18488496 + AT_rich Low_complexity Low_complexity 1 22 0 1326 197 4 0 chr5 181141778 181142012 -18488138 - AluJo SINE Alu -77 235 1 191 250 132 40 chr5 181142245 181142321 -18487829 + L3 LINE CR1 1377 1459 -118 191 329 26 13 chr5 181142472 181142548 -18487602 - L2 LINE L2 -3 3310 3234 840 167 47 0 chr5 181142604 181142754 -18487396 + AluJb SINE Alu 156 312 0 680 214 156 25 chr5 181142754 181143119 -18487031 - MER69 DNA AcHobo -29 2497 2085 1827 280 34 32 chr5 181143176 181143741 -18486409 - MER69 DNA AcHobo -1960 566 1 22 70 0 0 chr5 181143779 181143822 -18486328 + AT_rich Low_complexity Low_complexity 1 43 0 507 319 56 59 chr5 181143869 181144329 -18485821 - L2 LINE L2 -191 3081 2617 1509 168 7 41 chr5 181145987 181146278 -18483872 - L1MB7 LINE L1 -434 5678 5398 1737 185 55 2 chr5 181146278 181146670 -18483480 + L1MB7 LINE L1 5679 6099 -19 459 284 20 39 chr5 181147861 181148065 -18482085 - L1M4 LINE L1 -1119 4961 4762 28 0 0 0 chr5 181148183 181148211 -18481939 + AT_rich Low_complexity Low_complexity 1 28 0 238 189 57 0 chr5 181148219 181148272 -18481878 - L1M4 LINE L1 -1400 4680 4625 8983 218 62 49 chr5 181148281 181151184 -18478966 - L1MB3 LINE L1 -3 6416 3554 2037 146 10 0 chr5 181151184 181151493 -18478657 - AluSx SINE Alu 0 312 1 8983 218 62 49 chr5 181151493 181153531 -18476619 - L1MB3 LINE L1 -2865 3554 1376 687 44 11 0 chr5 181153531 181153621 -18476529 - L1PA3 LINE L1 -3 6152 6062 8983 218 62 49 chr5 181153621 181155001 -18475149 - L1MB3 LINE L1 -5043 1376 16 464 225 166 0 chr5 181155041 181155210 -18474940 - L1M4 LINE L1 -1495 4585 4389 1627 271 127 37 chr5 181155214 181156753 -18473397 - L1ME LINE L1 -2439 3641 2001 1560 201 3 13 chr5 181156962 181157275 -18472875 - AluJb SINE Alu 0 312 3 1348 294 89 36 chr5 181157335 181158858 -18471292 - L1ME LINE L1 -4586 1675 46 228 359 69 35 chr5 181159420 181159565 -18470585 - L2 LINE L2 -456 2858 2709 24 32 0 0 chr5 181160143 181160174 -18469976 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 181160909 181160931 -18469219 + AT_rich Low_complexity Low_complexity 1 22 0 458 312 6 13 chr5 181161468 181161625 -18468525 + MIR SINE MIR 59 214 -48 243 0 0 0 chr5 181162353 181162380 -18467770 + (A)n Simple_repeat Simple_repeat 1 27 0 260 270 34 34 chr5 181162459 181162548 -18467602 + MIR SINE MIR 153 241 -21 1131 288 107 54 chr5 181162938 181163751 -18466399 - L2 LINE L2 0 3313 2391 2756 153 47 13 chr5 181163776 181164326 -18465824 + L1 LINE L1 4152 4720 -1426 753 241 47 5 chr5 181164333 181164524 -18465626 - L2 LINE L2 -979 2335 2137 1221 277 106 40 chr5 181164721 181165277 -18464873 - MLT1E LTR MaLR 0 593 1 1579 183 39 7 chr5 181165302 181165581 -18464569 + AluJo SINE Alu 3 290 -22 23 54 0 0 chr5 181165581 181165618 -18464532 + AT_rich Low_complexity Low_complexity 1 37 0 6213 88 35 0 chr5 181167068 181168201 -18461949 - L1PA10 LINE L1 -2 6166 5024 1801 146 4 0 chr5 181169259 181169527 -18460623 - AluSx SINE Alu -15 297 29 244 420 42 0 chr5 181170583 181170702 -18459448 + L2 LINE L2 3143 3266 -6 243 216 48 80 chr5 181172442 181172567 -18457583 + MIR SINE MIR 51 171 -91 2327 75 7 0 chr5 181172594 181172899 -18457251 + AluY SINE Alu 1 307 -4 200 257 64 55 chr5 181172968 181173077 -18457073 - L2 LINE L2 -55 3258 3149 185 353 96 6 chr5 181173556 181173712 -18456438 - L2 LINE L2 -556 2758 2589 418 329 68 24 chr5 181174243 181174492 -18455658 - MIR SINE MIR 0 262 3 218 297 0 50 chr5 181174578 181174679 -18455471 + T-rich Low_complexity Low_complexity 4 99 0 293 368 55 15 chr5 181176016 181176217 -18453933 + L2 LINE L2 2901 3109 -204 266 263 305 0 chr5 181178879 181178974 -18451176 - L2 LINE L2 -7 3306 3183 442 356 35 17 chr5 181181007 181181237 -18448913 - MIR SINE MIR -27 235 2 2157 113 0 32 chr5 181181261 181181571 -18448579 - AluSc SINE Alu -7 302 3 317 307 170 39 chr5 181181790 181182073 -18448077 + MLT1K LTR MaLR 158 477 -111 301 220 100 47 chr5 181182609 181182759 -18447391 - MIR SINE MIR -13 249 92 25 0 0 0 chr5 181184277 181184302 -18445848 + AT_rich Low_complexity Low_complexity 1 25 0 856 256 46 21 chr5 181184350 181184635 -18445515 - MLT1I LTR MaLR -25 384 93 1512 213 113 124 chr5 181184703 181185525 -18444625 + LTR1B LTR ERV1 1 813 -13 1303 243 62 85 chr5 181185580 181186189 -18443961 + MLT1E3 LTR MaLR 8 620 -4 399 285 58 22 chr5 181186199 181186336 -18443814 + MIR SINE MIR 65 206 -56 363 310 103 10 chr5 181186493 181186702 -18443448 + MIR SINE MIR 19 246 -16 22 0 0 0 chr5 181186735 181186757 -18443393 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr5 181188324 181188350 -18441800 + AT_rich Low_complexity Low_complexity 1 26 0 339 261 80 71 chr5 181188573 181188799 -18441351 - L1ME4a LINE L1 -3 6118 5891 215 184 71 10 chr5 181188799 181188897 -18441253 + (TA)n Simple_repeat Simple_repeat 1 104 0 625 281 35 12 chr5 181189794 181189844 -18440306 + MER5B DNA MER1_type 1 48 -130 225 0 0 0 chr5 181189844 181189869 -18440281 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 625 281 35 12 chr5 181189869 181189989 -18440161 + MER5B DNA MER1_type 48 175 -3 394 315 134 9 chr5 181190765 181190997 -18439153 + L2 LINE L2 2707 2967 -347 777 247 29 0 chr5 181191007 181191181 -18438969 + MER20 DNA MER1_type 40 218 -1 284 350 24 8 chr5 181191239 181191362 -18438788 + L2 LINE L2 3012 3136 -177 386 207 37 0 chr5 181191520 181191602 -18438548 - MIR SINE MIR -112 150 66 2213 101 0 3 chr5 181192389 181192675 -18437475 + AluSx SINE Alu 3 287 -25 29 0 0 0 chr5 181192675 181192704 -18437446 + AT_rich Low_complexity Low_complexity 1 29 0 584 297 67 21 chr5 181192848 181193087 -18437063 + MIR SINE MIR 1 250 -12 216 97 0 0 chr5 181193362 181193393 -18436757 + (T)n Simple_repeat Simple_repeat 1 31 0 23 0 0 0 chr5 181193714 181193737 -18436413 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 181194986 181195018 -18435132 + AT_rich Low_complexity Low_complexity 1 32 0 1420 127 52 0 chr5 181195069 181195321 -18434829 + L1MA5 LINE L1 6034 6298 -2 796 303 26 21 chr5 181195584 181195924 -18434226 + L1MC4a LINE L1 5585 5926 -1882 592 366 12 12 chr5 181196019 181196265 -18433885 - MIR SINE MIR 0 262 17 288 0 0 0 chr5 181197121 181197153 -18432997 + (TG)n Simple_repeat Simple_repeat 2 33 0 1207 245 63 57 chr5 181197585 181198042 -18432108 + MLT2C2 LTR ERVL 5 464 0 691 299 97 36 chr5 181198960 181199372 -18430778 + MLT1J2 LTR MaLR 1 437 -13 218 346 55 24 chr5 181200142 181200269 -18429881 + L3b LINE CR1 1155 1285 -298 222 283 0 0 chr5 181200435 181200496 -18429654 - MIR3 SINE MIR -48 160 99 2114 282 89 45 chr5 181201197 181201500 -18428650 - L2 LINE L2 -160 3153 2865 550 112 0 11 chr5 181201500 181201589 -18428561 + L1MA4A LINE L1 6207 6294 -9 2114 282 89 45 chr5 181201589 181201783 -18428367 - L2 LINE L2 -448 2865 2681 2186 114 3 0 chr5 181201783 181202080 -18428070 + AluSp SINE Alu 1 298 -15 2114 282 89 45 chr5 181202080 181202655 -18427495 - L2 LINE L2 -632 2681 2015 557 326 89 41 chr5 181203430 181204012 -18426138 - L1M4 LINE L1 -2847 3299 2690 2172 293 74 44 chr5 181204091 181205512 -18424638 - L2 LINE L2 -15 3298 1827 5318 76 1 3 chr5 181205588 181206296 -18423854 - L1PA7 LINE L1 -1 6153 5447 2655 75 14 0 chr5 181206296 181206679 -18423471 + L1M LINE L1 5032 5419 -743 219 274 60 12 chr5 181206688 181206772 -18423378 - L2 LINE L2 -1700 1614 1527 24 0 0 0 chr5 181207841 181207865 -18422285 + AT_rich Low_complexity Low_complexity 1 24 0 2374 82 7 0 chr5 181207949 181208252 -18421898 + AluY SINE Alu 1 305 -6 488 254 58 36 chr5 181208585 181208723 -18421427 + MIR SINE MIR 122 262 0 250 62 0 0 chr5 181210828 181210860 -18419290 - HERVK3 LTR ERVK -7025 218 187 2332 125 6 12 chr5 181211092 181211436 -18418714 - LTR3b LTR ERVK 0 500 159 2354 86 0 3 chr5 181211505 181211809 -18418341 + AluY SINE Alu 1 303 -8 183 42 0 0 chr5 181212213 181212237 -18417913 + (T)n Simple_repeat Simple_repeat 1 24 0 915 201 30 0 chr5 181212605 181212804 -18417346 + L1MA9 LINE L1 5908 6112 -200 183 311 214 0 chr5 181214220 181214323 -18415827 - L2 LINE L2 -3 3269 3145 2571 169 7 13 chr5 181214712 181215174 -18414976 + MLT2C2 LTR ERVL 4 462 -2 807 265 36 42 chr5 181215205 181215511 -18414639 - LTR16A1 LTR ERVL -8 449 146 192 333 36 36 chr5 181215859 181215943 -18414207 - L2 LINE L2 -31 3241 3158 355 294 64 0 chr5 181215999 181216108 -18414042 + MIR SINE MIR 117 232 -30 304 336 23 39 chr5 181216133 181216261 -18413889 + L2 LINE L2 3184 3309 -4 417 221 93 29 chr5 181216944 181217084 -18413066 - L1ME3 LINE L1 -75 6087 5939 2710 171 25 33 chr5 181217730 181218584 -18411566 + MER21B-int LTR ERV1 3232 4136 -55 4316 179 53 9 chr5 181218672 181219475 -18410675 + MER21B LTR ERV1 3 841 -22 2507 62 7 3 chr5 181220704 181221012 -18409138 - AluSp SINE Alu -4 309 1 244 364 0 0 chr5 181223482 181223570 -18406580 + MIR SINE MIR 18 105 -103 280 192 48 10 chr5 181224022 181224126 -18406024 + (TA)n Simple_repeat Simple_repeat 2 109 0 439 304 34 53 chr5 181225097 181225304 -18404846 + MIR SINE MIR 49 251 -11 2225 102 3 7 chr5 181225875 181226179 -18403971 + AluSq SINE Alu 1 303 -10 813 276 14 18 chr5 181226215 181226436 -18403714 + MER58A DNA MER1_type 5 224 0 2885 125 106 8 chr5 181226603 181227083 -18403067 + MER1A DNA MER1_type 1 527 0 306 266 102 0 chr5 181227184 181227312 -18402838 - MLT1J2 LTR MaLR -242 208 68 334 301 116 46 chr5 181227400 181227739 -18402411 - L2 LINE L2 -219 3053 2692 2257 115 0 0 chr5 181227746 181228051 -18402099 - AluSg SINE Alu -5 305 1 350 335 67 16 chr5 181229581 181229775 -18400375 - MIR SINE MIR -18 244 41 185 381 41 0 chr5 181230287 181230384 -18399766 - MIR SINE MIR -109 153 53 306 106 0 0 chr5 181230405 181230452 -18399698 + (TG)n Simple_repeat Simple_repeat 2 48 0 390 307 92 80 chr5 181230482 181230981 -18399169 + L3 LINE CR1 876 1380 -197 366 23 0 0 chr5 181231801 181231844 -18398306 + (TG)n Simple_repeat Simple_repeat 2 44 0 415 235 0 92 chr5 181232434 181232587 -18397563 - L2 LINE L2 0 3313 3175 425 333 103 4 chr5 181233173 181233446 -18396704 - L2 LINE L2 -140 3173 2874 337 191 0 0 chr5 181233493 181233556 -18396594 + L2 LINE L2 2755 2817 -497 628 342 45 4 chr5 181233560 181233826 -18396324 - L2 LINE L2 -621 2693 2417 572 292 249 28 chr5 181235805 181236158 -18393992 - L2 LINE L2 -1 3312 2882 2130 118 0 3 chr5 181236177 181236473 -18393677 + AluSg SINE Alu 1 295 -15 3367 115 6 4 chr5 181236641 181237137 -18393013 - LOR1a LTR ERV1 0 497 1 199 388 48 0 chr5 181237250 181237353 -18392797 - MIR SINE MIR -58 150 43 341 347 82 53 chr5 181238673 181239224 -18390926 - L2 LINE L2 -6 3307 2735 22 0 0 0 chr5 181239789 181239811 -18390339 + AT_rich Low_complexity Low_complexity 1 22 0 2112 107 150 8 chr5 181239986 181240359 -18389791 - MSTA LTR MaLR 0 428 3 441 292 102 33 chr5 181240368 181240566 -18389584 + MIR SINE MIR 6 214 -48 180 250 133 0 chr5 181240763 181240823 -18389327 + L3 LINE CR1 1485 1552 -25 259 268 58 58 chr5 181241387 181241577 -18388573 - L1MC4a LINE L1 -1747 6061 5872 298 260 70 0 chr5 181241602 181241702 -18388448 - L1MC4a LINE L1 -2050 5758 5652 484 319 60 40 chr5 181241815 181242226 -18387924 - L1MC4a LINE L1 -450 5671 5255 1734 116 3 53 chr5 181242276 181242560 -18387590 - AluSx SINE Alu -18 294 25 1816 152 0 33 chr5 181242583 181242886 -18387264 + AluSx SINE Alu 1 293 -19 405 153 0 0 chr5 181242886 181242958 -18387192 + (TA)n Simple_repeat Simple_repeat 1 72 0 515 339 96 39 chr5 181243014 181244227 -18385923 - L1MC4a LINE L1 -1228 4918 3599 2447 4 0 0 chr5 181244227 181244495 -18385655 - AluY SINE Alu 0 311 44 1558 146 4 55 chr5 181245019 181245192 -18384958 - AluSx SINE Alu -13 299 144 1913 120 0 87 chr5 181245192 181245526 -18384624 - AluSx SINE Alu -5 307 3 1558 146 4 55 chr5 181245526 181245627 -18384523 - AluSx SINE Alu -168 144 39 313 274 82 39 chr5 181245718 181245926 -18384224 - L1MC4a LINE L1 -3235 2911 2695 315 288 38 25 chr5 181246044 181246284 -18383866 - L1MC4a LINE L1 -3734 2412 2170 5290 58 10 10 chr5 181246867 181247553 -18382597 + SVA Other Other 701 1386 0 237 65 0 0 chr5 181247873 181247904 -18382246 + (A)n Simple_repeat Simple_repeat 1 31 0 245 254 78 36 chr5 181247937 181248130 -18382020 - HAL1b LINE L1 -966 382 182 495 0 0 0 chr5 181248356 181248411 -18381739 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 310 301 18 60 chr5 181249131 181249297 -18380853 - MLT1J2 LTR MaLR -22 428 270 195 310 0 0 chr5 181249626 181249684 -18380466 + L2 LINE L2 3256 3313 0 1982 200 33 68 chr5 181250225 181250740 -18379410 + MLT1D LTR MaLR 1 497 -8 198 91 0 0 chr5 181251361 181251394 -18378756 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr5 181253044 181253069 -18377081 + AT_rich Low_complexity Low_complexity 1 25 0 271 336 159 68 chr5 181253177 181253498 -18376652 - L2 LINE L2 -8 3264 2915 642 269 190 46 chr5 181254533 181255060 -18375090 + L2 LINE L2 2709 3310 -3 23 0 0 0 chr5 181255190 181255213 -18374937 + AT_rich Low_complexity Low_complexity 1 23 0 193 280 11 54 chr5 181255230 181255323 -18374827 + MIR SINE MIR 110 198 -64 455 252 13 77 chr5 181255436 181255591 -18374559 - MIR SINE MIR 0 262 118 330 302 40 40 chr5 181257077 181257279 -18372871 + MIR SINE MIR 53 254 -8 6250 60 26 3 chr5 181257334 181258388 -18371762 + L1PA6 LINE L1 5062 6141 -13 26 88 0 0 chr5 181258555 181258623 -18371527 + AT_rich Low_complexity Low_complexity 1 68 0 1132 234 87 96 chr5 181258989 181259532 -18370618 - MLT1F LTR MaLR -2 540 3 1789 99 0 149 chr5 181261685 181262040 -18368110 + AluSx SINE Alu 1 302 0 23 33 0 0 chr5 181262445 181262475 -18367675 + AT_rich Low_complexity Low_complexity 1 30 0 183 205 0 0 chr5 181262715 181262754 -18367396 + L3 LINE CR1 795 833 -744 560 252 6 31 chr5 181263396 181263555 -18366595 + L2 LINE L2 3159 3313 0 2169 105 0 3 chr5 181263724 181264020 -18366130 + AluSg SINE Alu 1 295 -15 1829 132 12 71 chr5 181264052 181264377 -18365773 + AluSx SINE Alu 1 306 -6 264 267 81 0 chr5 181264483 181264569 -18365581 + MIR SINE MIR 167 259 -3 192 248 163 0 chr5 181264874 181264955 -18365195 - MIR SINE MIR -66 142 60 2176 116 7 0 chr5 181265416 181265718 -18364432 - AluSg SINE Alu -6 304 1 307 236 34 34 chr5 181267333 181267422 -18362728 - L1MC4 LINE L1 -1340 6702 6614 473 244 77 36 chr5 181267423 181267591 -18362559 - L1ME3A LINE L1 -12 6158 5984 233 408 0 23 chr5 181267934 181268064 -18362086 + MIR SINE MIR 34 160 -102 231 36 0 0 chr5 181269275 181269303 -18360847 + (A)n Simple_repeat Simple_repeat 1 28 0 1164 135 18 31 chr5 181269460 181269628 -18360522 - L1MA7 LINE L1 -2 6289 6123 2183 128 0 0 chr5 181269628 181269933 -18360217 - AluSc SINE Alu -4 305 1 1164 135 18 31 chr5 181269933 181269993 -18360157 - L1MA7 LINE L1 -168 6123 6064 1403 304 111 32 chr5 181270165 181271167 -18358983 - L2 LINE L2 0 3313 2248 627 58 0 0 chr5 181271167 181271253 -18358897 - AluSg/x SINE Alu -9 303 218 251 317 24 0 chr5 181271264 181271346 -18358804 - L2 LINE L2 -1070 2244 2161 372 216 39 29 chr5 181271835 181271937 -18358213 + MER103 DNA DNA 43 145 -21 427 347 99 0 chr5 181272057 181272270 -18357880 - MIR SINE MIR 0 262 29 662 270 86 0 chr5 181272282 181272456 -18357694 + MER5A DNA MER1_type 1 189 0 307 344 117 7 chr5 181272561 181272715 -18357435 + MER5B DNA MER1_type 5 175 -3 422 299 153 13 chr5 181272756 181272913 -18357237 - MER5A DNA MER1_type -1 188 10 21 36 0 0 chr5 181272964 181272992 -18357158 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 181273705 181273726 -18356424 + AT_rich Low_complexity Low_complexity 1 21 0 2289 108 0 0 chr5 181273727 181274034 -18356116 + AluSx SINE Alu 1 307 -5 280 121 52 17 chr5 181275133 181275191 -18354959 + MLT1C LTR MaLR 408 467 0 29 28 0 0 chr5 181275405 181275441 -18354709 + AT_rich Low_complexity Low_complexity 1 36 0 1085 165 107 45 chr5 181275472 181275696 -18354454 + MER8 DNA MER2_type 2 239 0 2470 154 2 24 chr5 181275726 181276142 -18354008 + MLT2D LTR ERVL 1 407 -7 286 314 72 46 chr5 181276199 181276352 -18353798 - MLT1G1 LTR MaLR -433 162 6 460 263 68 0 chr5 181276594 181276727 -18353423 + MIR SINE MIR 50 191 -71 278 298 129 22 chr5 181276750 181276963 -18353187 - MIR SINE MIR -10 252 22 2101 117 13 0 chr5 181277548 181277848 -18352302 + AluSg SINE Alu 1 304 -6 1006 115 60 16 chr5 181278624 181278806 -18351344 - MER30B DNA MER1_type 0 190 1 884 266 58 51 chr5 181279166 181279774 -18350376 + L1MEd LINE L1 732 1343 -4862 234 276 104 8 chr5 181279885 181280019 -18350131 + L1MEd LINE L1 1541 1687 -4709 380 122 0 86 chr5 181280151 181280239 -18349911 + L1PA10 LINE L1 5902 5979 -189 906 89 0 22 chr5 181280242 181280377 -18349773 + L1PA10 LINE L1 6035 6166 -2 386 322 50 17 chr5 181280604 181280792 -18349358 + L1MEd LINE L1 2186 2339 -3876 188 33 0 33 chr5 181280816 181280846 -18349304 + (CAT)n Simple_repeat Simple_repeat 2 30 0 252 259 0 0 chr5 181281408 181281462 -18348688 + GA-rich Low_complexity Low_complexity 2 55 0 538 294 84 55 chr5 181281672 181282034 -18348116 + L1M4 LINE L1 3929 4306 -1840 656 234 105 83 chr5 181282083 181282145 -18348005 - MLT1C LTR MaLR -2 465 406 2165 105 0 0 chr5 181282145 181282440 -18347710 + AluSq SINE Alu 1 295 -18 656 234 105 83 chr5 181282440 181282837 -18347313 - MLT1C LTR MaLR -61 406 1 312 277 34 8 chr5 181283556 181283675 -18346475 + MLT1L LTR MaLR 490 611 -4 2243 74 0 7 chr5 181283825 181284110 -18346040 + AluSc SINE Alu 3 285 -24 540 145 26 0 chr5 181284113 181284230 -18345920 + (TA)n Simple_repeat Simple_repeat 1 120 0 1947 136 3 17 chr5 181285175 181285476 -18344674 + AluSx SINE Alu 1 297 -15 1917 146 0 3 chr5 181285666 181285953 -18344197 - AluSx SINE Alu -26 286 1 665 82 0 0 chr5 181285956 181286041 -18344109 - AluSq/x SINE Alu -179 133 49 236 304 34 81 chr5 181286303 181286451 -18343699 + MIR SINE MIR 20 160 -102 2298 96 0 0 chr5 181287904 181288197 -18341953 - AluSc SINE Alu -16 293 1 1683 115 4 0 chr5 181288206 181288432 -18341718 - AluSp SINE Alu -70 243 17 393 258 32 118 chr5 181288816 181289095 -18341055 + L2 LINE L2 2096 2350 -964 815 280 65 25 chr5 181289208 181289562 -18340588 - L1ME3A LINE L1 0 6170 5803 1359 133 28 28 chr5 181289596 181289851 -18340299 - Tigger7 DNA MER2_type -4 2487 2233 1141 278 108 44 chr5 181289889 181290943 -18339207 - L1ME3A LINE L1 -391 5771 4596 291 28 0 0 chr5 181290943 181290979 -18339171 + (TC)n Simple_repeat Simple_repeat 1 36 0 1141 278 108 44 chr5 181290979 181291342 -18338808 - L1ME3A LINE L1 -1566 4596 4258 396 0 0 0 chr5 181291430 181291474 -18338676 + (TG)n Simple_repeat Simple_repeat 2 45 0 1926 121 0 50 chr5 181291591 181291913 -18338237 - AluSq SINE Alu 0 307 1 5422 79 31 0 chr5 181291926 181292660 -18337490 - L1PA7 LINE L1 -13 6141 5385 192 97 0 0 chr5 181292667 181292698 -18337452 + (TTA)n Simple_repeat Simple_repeat 3 33 0 7544 26 0 1 chr5 181292699 181294241 -18335909 - L1PA4 LINE L1 -19 6136 4596 13365 38 4 3 chr5 181294241 181295917 -18334233 - L1P LINE L1 -1431 4715 3038 12596 96 23 11 chr5 181295915 181297825 -18332325 - L1PA7 LINE L1 -755 5391 3459 * 26036 132 23 76 chr5 181297929 181303172 -18326978 - L1P LINE L1 -1172 4974 12 238 196 52 72 chr5 181303648 181303745 -18326405 - MLT1C LTR MaLR -256 211 117 471 92 26 0 chr5 181303837 181303913 -18326237 - MADE1 DNA Mariner -2 78 1 30 0 0 0 chr5 181304549 181304579 -18325571 + AT_rich Low_complexity Low_complexity 1 30 0 305 184 0 0 chr5 181304720 181304769 -18325381 + MER57A LTR ERV1 295 343 -60 228 365 21 10 chr5 181305621 181305717 -18324433 - MER5B DNA MER1_type -21 157 61 21 0 0 0 chr5 181305717 181305738 -18324412 + AT_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr5 181305818 181305850 -18324300 + (TG)n Simple_repeat Simple_repeat 1 32 0 1927 118 0 14 chr5 181306647 181306926 -18323224 + AluSx SINE Alu 24 298 -14 346 376 56 15 chr5 181307467 181307664 -18322486 + MIR SINE MIR 3 207 -55 236 317 62 54 chr5 181308219 181308443 -18321707 - MLT1K LTR MaLR -347 241 16 211 327 39 29 chr5 181308866 181308970 -18321180 + L2 LINE L2 3201 3305 -8 476 250 89 40 chr5 181310122 181310370 -18319780 - HAL1 LINE L1 -90 2417 2158 1265 272 80 32 chr5 181310373 181310447 -18319703 - HAL1 LINE L1 -421 2086 2017 2068 160 57 0 chr5 181310447 181310816 -18319334 - MLT1B LTR MaLR 0 390 1 1265 272 80 32 chr5 181310816 181311341 -18318809 - HAL1 LINE L1 -490 2017 1458 357 342 47 16 chr5 181311502 181311692 -18318458 - HAL1 LINE L1 -1783 724 529 1841 135 30 7 chr5 181311720 181312024 -18318126 - AluSx SINE Alu -1 311 1 431 176 0 0 chr5 181312039 181312124 -18318026 + L1 LINE L1 5159 5243 -903 1495 114 29 29 chr5 181312124 181312396 -18317754 + L1PB3 LINE L1 5876 6147 -7 7081 212 35 26 chr5 181312435 181315320 -18314830 - L1MB3 LINE L1 -8 6175 3269 32 67 0 0 chr5 181315576 181315636 -18314514 + AT_rich Low_complexity Low_complexity 1 60 0 279 114 0 0 chr5 181315690 181315734 -18314416 - LTR30 LTR ERV1 -123 599 556 2387 256 53 8 chr5 181315750 181316095 -18314055 - L1MB3 LINE L1 -3115 3031 2703 14051 130 34 20 chr5 181316095 181317464 -18312686 + Tigger1 DNA MER2_type 1 1419 -999 2241 93 13 13 chr5 181317464 181317774 -18312376 + AluSg SINE Alu 1 310 0 14051 130 34 20 chr5 181317774 181318788 -18311362 + Tigger1 DNA MER2_type 1419 2417 -1 2387 256 53 8 chr5 181318788 181319267 -18310883 - L1MB3 LINE L1 -3443 2703 2170 1061 202 57 101 chr5 181319275 181319431 -18310719 + MLT1A2 LTR MaLR 5 166 -208 180 0 0 0 chr5 181319431 181319451 -18310699 + (TC)n Simple_repeat Simple_repeat 1 20 0 1061 202 57 101 chr5 181319451 181319681 -18310469 + MLT1A2 LTR MaLR 166 374 0 1695 190 13 49 chr5 181319681 181319819 -18310331 + MLT1A2-int LTR MaLR 1 142 -1593 4469 123 14 1 chr5 181319819 181320507 -18309643 - L1PA15 LINE L1 -4 6161 5465 1695 190 13 49 chr5 181320507 181320753 -18309397 + MLT1A2-int LTR MaLR 142 371 -1364 252 0 0 0 chr5 181322658 181322686 -18307464 + (A)n Simple_repeat Simple_repeat 1 28 0 241 307 75 71 chr5 181322787 181323067 -18307083 + L2 LINE L2 2214 2494 -820 183 335 100 88 chr5 181323264 181323694 -18306456 + L2 LINE L2 2838 3272 0 24 0 0 0 chr5 181324194 181324218 -18305932 + AT_rich Low_complexity Low_complexity 1 24 0 1290 230 50 38 chr5 181324469 181324869 -18305281 + MLT1C LTR MaLR 59 463 -4 2547 61 0 6 chr5 181326569 181326882 -18303268 - AluY SINE Alu 0 311 1 510 272 21 42 chr5 181326929 181327120 -18303030 + Charlie8 DNA MER1_type 129 315 -2102 394 347 157 21 chr5 181327525 181327862 -18302288 + L2 LINE L2 2847 3229 -84 218 347 56 0 chr5 181328251 181328323 -18301827 - MER5C DNA MER1_type -248 76 1 2029 130 22 0 chr5 181328722 181329046 -18301104 - L1PA16 LINE L1 -9 6157 5827 2061 137 0 3 chr5 181330768 181331081 -18299069 + AluSq SINE Alu 1 312 -1 23 54 0 0 chr5 181331603 181331640 -18298510 + AT_rich Low_complexity Low_complexity 1 37 0 414 0 0 0 chr5 181331810 181331856 -18298294 + (TG)n Simple_repeat Simple_repeat 2 47 0 311 0 26 0 chr5 181332014 181332053 -18298097 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 224 330 31 10 chr5 181332356 181332453 -18297697 - L2 LINE L2 -14 3299 3201 332 235 94 68 chr5 181333691 181333963 -18296187 - MER34C LTR ERV1 -8 720 351 240 111 0 0 chr5 181335067 181335103 -18295047 + (TA)n Simple_repeat Simple_repeat 2 37 0 331 261 0 22 chr5 181335103 181335195 -18294955 - L1MC4 LINE L1 -1339 6703 6614 736 236 128 0 chr5 181335249 181335444 -18294706 + MIR SINE MIR 7 226 -36 2223 120 0 0 chr5 181336286 181336585 -18293565 - AluSc SINE Alu -10 299 1 5205 169 34 6 chr5 181336975 181338173 -18291977 - L1PA16 LINE L1 -6 6160 4927 2511 91 0 35 chr5 181338291 181338665 -18291485 - L1PA13 LINE L1 -5 6158 5798 22 0 0 0 chr5 181338773 181338795 -18291355 + AT_rich Low_complexity Low_complexity 1 22 0 1040 198 146 55 chr5 181338973 181339281 -18290869 + MLT1A1 LTR MaLR 1 336 -29 2166 183 98 25 chr5 181339289 181339653 -18290497 - MER34 LTR ERV1 -26 516 107 2283 113 0 0 chr5 181339653 181339963 -18290187 + AluSx SINE Alu 1 310 -2 2166 183 98 25 chr5 181339963 181340079 -18290071 - MER34 LTR ERV1 -435 107 1 204 377 16 49 chr5 181340464 181340647 -18289503 - MIR3 SINE MIR -1 207 31 * 328 331 17 72 chr5 181340628 181340809 -18289341 + L2 LINE L2 3098 3268 -4 735 205 46 55 chr5 181341074 181341370 -18288780 - L1 LINE L1 -3802 3763 3465 369 291 40 47 chr5 181341408 181341556 -18288594 + L2 LINE L2 3167 3313 0 2309 98 0 0 chr5 181341685 181341981 -18288169 + AluSc SINE Alu 3 298 -11 31 58 0 0 chr5 181341996 181342048 -18288102 + AT_rich Low_complexity Low_complexity 1 52 0 226 340 50 10 chr5 181343438 181343538 -18286612 + L2 LINE L2 3159 3262 -10 182 272 98 22 chr5 181343611 181343703 -18286447 + L3 LINE CR1 1297 1395 -182 551 309 40 72 chr5 181343767 181343956 -18286194 - L2 LINE L2 -7 3306 3131 2033 91 84 7 chr5 181343956 181344241 -18285909 + AluSx SINE Alu 1 307 -5 551 309 40 72 chr5 181344241 181344397 -18285753 - L2 LINE L2 -182 3131 2972 190 77 0 0 chr5 181346207 181346233 -18283917 - MIR SINE MIR -122 140 115 2299 102 0 0 chr5 181346305 181346609 -18283541 + AluSg SINE Alu 1 304 -6 213 85 34 51 chr5 181346798 181346857 -18283293 + (TTA)n Simple_repeat Simple_repeat 2 59 0 219 310 0 0 chr5 181347675 181347733 -18282417 + (TATG)n Simple_repeat Simple_repeat 1 58 0 432 332 59 26 chr5 181348407 181349019 -18281131 + L1ME3 LINE L1 5315 5938 -224 2599 153 32 13 chr5 181349305 181349896 -18280254 - MER4E LTR ERV1 0 766 1 346 287 19 19 chr5 181351062 181351170 -18278980 + L2 LINE L2 3188 3295 -18 488 119 0 97 chr5 181351818 181351952 -18278198 - AluSq/x SINE Alu -191 121 1 1450 198 126 14 chr5 181351960 181352318 -18277832 + MER34 LTR ERV1 119 516 -26 1040 198 146 55 chr5 181352326 181352634 -18277516 - MLT1A1 LTR MaLR -29 336 1 22 0 0 0 chr5 181352812 181352834 -18277316 + AT_rich Low_complexity Low_complexity 1 22 0 2511 91 0 35 chr5 181352942 181353316 -18276834 + L1PA13 LINE L1 5798 6158 -5 5205 169 34 6 chr5 181353434 181354632 -18275518 + L1PA16 LINE L1 4927 6160 -6 2223 120 0 0 chr5 181355022 181355321 -18274829 + AluSc SINE Alu 1 299 -10 736 236 128 0 chr5 181356163 181356358 -18273792 - MIR SINE MIR -36 226 7 357 289 0 0 chr5 181356410 181356500 -18273650 + L1MC4 LINE L1 6614 6703 -1339 300 278 10 31 chr5 181356454 181356551 -18273599 - L1MC4 LINE L1 -1339 6703 6609 * 332 235 94 68 chr5 181357638 181357910 -18272240 + MER34C LTR ERV1 351 577 -8 224 330 31 10 chr5 181359150 181359247 -18270903 + L2 LINE L2 3201 3299 -14 311 0 26 0 chr5 181359550 181359589 -18270561 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 396 0 0 0 chr5 181359747 181359791 -18270359 + (CA)n Simple_repeat Simple_repeat 2 45 0 23 54 0 0 chr5 181359961 181359998 -18270152 + AT_rich Low_complexity Low_complexity 1 37 0 2061 137 0 3 chr5 181360520 181360833 -18269317 - AluSq SINE Alu -1 312 1 2029 130 22 0 chr5 181362557 181362881 -18267269 + L1PA16 LINE L1 5827 6157 -9 218 347 56 0 chr5 181363280 181363352 -18266798 + MER5C DNA MER1_type 1 76 -248 394 347 157 21 chr5 181363741 181364078 -18266072 - L2 LINE L2 -84 3229 2847 510 272 21 42 chr5 181364483 181364674 -18265476 - Charlie8 DNA MER1_type -2102 315 129 2294 90 0 10 chr5 181364720 181365032 -18265118 + AluY SINE Alu 1 309 -2 757 128 0 0 chr5 181365039 181365148 -18265002 - MER34 LTR ERV1 -433 109 1 204 377 16 49 chr5 181365533 181365716 -18264434 - MIR3 SINE MIR -1 207 31 * 328 331 17 72 chr5 181365697 181365878 -18264272 + L2 LINE L2 3098 3268 -4 735 205 46 55 chr5 181366143 181366439 -18263711 - L1 LINE L1 -3802 3763 3465 369 291 40 47 chr5 181366477 181366625 -18263525 + L2 LINE L2 3167 3313 0 2309 98 0 0 chr5 181366754 181367050 -18263100 + AluSc SINE Alu 3 298 -11 31 58 0 0 chr5 181367065 181367117 -18263033 + AT_rich Low_complexity Low_complexity 1 52 0 226 340 50 10 chr5 181368508 181368608 -18261542 + L2 LINE L2 3159 3262 -10 182 272 98 22 chr5 181368681 181368773 -18261377 + L3 LINE CR1 1297 1395 -182 551 309 40 72 chr5 181368837 181369026 -18261124 - L2 LINE L2 -7 3306 3131 2033 91 84 7 chr5 181369026 181369311 -18260839 + AluSx SINE Alu 1 307 -5 551 309 40 72 chr5 181369311 181369467 -18260683 - L2 LINE L2 -182 3131 2972 190 77 0 0 chr5 181371276 181371302 -18258848 - MIR SINE MIR -122 140 115 2299 102 0 0 chr5 181371374 181371678 -18258472 + AluSg SINE Alu 1 304 -6 213 85 34 51 chr5 181371867 181371926 -18258224 + (TTA)n Simple_repeat Simple_repeat 2 59 0 219 310 0 0 chr5 181372744 181372802 -18257348 + (TATG)n Simple_repeat Simple_repeat 1 58 0 425 333 59 26 chr5 181373476 181374088 -18256062 + L1ME3 LINE L1 5315 5938 -224 2599 153 32 13 chr5 181374374 181374965 -18255185 - MER4E LTR ERV1 0 766 1 346 287 19 19 chr5 181376132 181376240 -18253910 + L2 LINE L2 3188 3295 -18 466 318 86 33 chr5 181376971 181377330 -18252820 + L2 LINE L2 2051 2428 -886 326 314 21 36 chr5 181377587 181377727 -18252423 - MIR SINE MIR -66 196 59 27 0 0 0 chr5 181377787 181377814 -18252336 + AT_rich Low_complexity Low_complexity 1 27 0 507 207 95 0 chr5 181377832 181377948 -18252202 + MIR SINE MIR 117 243 -19 303 444 18 9 chr5 181377969 181378194 -18251956 - L2 LINE L2 -525 2789 2563 971 291 39 70 chr5 181380051 181380508 -18249642 + LTR67 LTR ERVL 115 557 0 2282 110 0 0 chr5 181380540 181380839 -18249311 - AluSg SINE Alu -11 299 1 333 100 0 0 chr5 181380972 181381022 -18249128 + (TC)n Simple_repeat Simple_repeat 1 50 0 459 0 0 0 chr5 181381022 181381073 -18249077 + (TG)n Simple_repeat Simple_repeat 2 52 0 412 333 114 23 chr5 181381707 181381926 -18248224 + MIR SINE MIR 1 239 -23 329 221 16 81 chr5 181384431 181384582 -18245568 - MLT1H1 LTR MaLR -2 561 418 373 288 4 21 chr5 181384828 181384954 -18245196 - MLT1F LTR MaLR -441 101 3 188 366 0 28 chr5 181385219 181385290 -18244860 + MIR SINE MIR 6 74 -188 420 20 0 0 chr5 181385436 181385485 -18244665 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 445 283 59 7 chr5 181386299 181386451 -18243699 - MLT1J1 LTR MaLR -281 165 6 383 324 68 36 chr5 181386492 181386770 -18243380 - Charlie8 DNA MER1_type -2130 287 1 881 292 73 16 chr5 181386973 181387161 -18242989 + MLT1I LTR MaLR 1 177 -232 231 114 0 0 chr5 181387161 181387196 -18242954 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 881 292 73 16 chr5 181387196 181387391 -18242759 + MLT1I LTR MaLR 177 406 -3 402 323 45 45 chr5 181387454 181387609 -18242541 + MIR3 SINE MIR 23 177 -31 2027 142 0 0 chr5 181387747 181388042 -18242108 - AluSq SINE Alu -13 300 6 2009 123 7 10 chr5 181388947 181389249 -18240901 + AluSx SINE Alu 1 301 -11 286 357 50 25 chr5 181389312 181389595 -18240555 + L2 LINE L2 2470 2759 -555 1617 143 113 55 chr5 181390036 181390365 -18239785 + MER7A DNA MER2_type 1 346 0 1664 157 21 24 chr5 181390371 181390569 -18239581 - MER44D DNA MER2_type -1882 609 412 1833 191 24 0 chr5 181390569 181390905 -18239245 + MER2 DNA MER2_type 1 344 0 1664 157 21 24 chr5 181390905 181391038 -18239112 - MER44D DNA MER2_type -2079 412 9 364 314 132 4 chr5 181391342 181391584 -18238566 + LTR16C LTR ERVL 215 487 -4 1880 189 75 8 chr5 181391645 181392047 -18238103 - MSTB1 LTR MaLR 0 432 4 7166 219 13 19 chr5 181392050 181393706 -18236444 - MSTB1-int LTR MaLR 0 1651 6 2221 173 42 0 chr5 181393712 181394122 -18236028 - MSTB1 LTR MaLR 0 432 6 243 313 55 39 chr5 181395199 181395327 -18234823 - L2 LINE L2 -4 3309 3180 694 244 51 13 chr5 181395365 181395599 -18234551 + MER46C DNA MER2_type 79 321 -17 226 239 250 11 chr5 181395644 181395732 -18234418 + MER91A DNA MER1_type 61 169 -27 312 27 0 0 chr5 181395987 181396024 -18234126 + (GA)n Simple_repeat Simple_repeat 2 38 0 404 324 50 11 chr5 181396049 181396228 -18233922 - MIR SINE MIR -70 192 7 2230 65 0 39 chr5 181396569 181396741 -18233409 - AluY SINE Alu -16 295 139 2744 10 0 0 chr5 181396741 181397041 -18233109 - AluYa5 SINE Alu -11 300 1 2230 65 0 39 chr5 181397041 181397175 -18232975 - AluY SINE Alu -172 139 1 210 71 0 0 chr5 181397516 181397544 -18232606 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 263 105 0 0 chr5 181398205 181398243 -18231907 - LTR67 LTR ERVL -15 542 505 241 130 0 0 chr5 181398836 181398882 -18231268 + L1MA9 LINE L1 6225 6270 -42 1677 218 50 13 chr5 181398882 181399263 -18230887 - MSTD LTR MaLR 0 396 2 30 0 0 0 chr5 181399982 181400012 -18230138 + AT_rich Low_complexity Low_complexity 1 30 0 201 74 0 0 chr5 181400996 181401023 -18229127 + (T)n Simple_repeat Simple_repeat 1 27 0 372 274 155 58 chr5 181402704 181403014 -18227136 + MER102b DNA MER1_type 1 340 -1 1121 289 92 18 chr5 181403778 181404596 -18225554 - L1ME LINE L1 -3038 3042 2165 299 272 100 53 chr5 181404750 181405070 -18225080 - L1ME LINE L1 -5651 419 85 529 309 107 40 chr5 181405394 181405579 -18224571 - L2 LINE L2 -47 3266 3095 2292 109 3 0 chr5 181405579 181405883 -18224267 + AluSg SINE Alu 6 310 0 529 309 107 40 chr5 181405883 181406024 -18224126 - L2 LINE L2 -218 3095 2918 225 361 56 9 chr5 181407123 181407231 -18222919 - L2 LINE L2 -19 3253 3141 189 250 28 42 chr5 181407374 181407446 -18222704 - L2 LINE L2 -151 3162 3092 399 341 10 53 chr5 181408141 181408349 -18221801 - MIR SINE MIR -31 231 33 2621 51 0 0 chr5 181408646 181408957 -18221193 - AluY SINE Alu 0 311 1 1898 131 10 38 chr5 181408957 181409270 -18220880 - AluSx SINE Alu -8 304 1 1016 143 0 50 chr5 181409725 181409886 -18220264 + FRAM SINE Alu 1 153 -23 217 87 22 22 chr5 181409888 181409934 -18220216 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 1948 136 0 29 chr5 181411335 181411645 -18218505 + AluSx SINE Alu 1 301 -11 24 0 0 0 chr5 181412295 181412319 -18217831 + AT_rich Low_complexity Low_complexity 1 24 0 224 250 0 22 chr5 181412585 181412677 -18217473 + GA-rich Low_complexity Low_complexity 3 92 0 1628 140 6 107 chr5 181413615 181413951 -18216199 - AluJo SINE Alu 0 302 1 207 0 0 0 chr5 181414469 181414492 -18215658 + (A)n Simple_repeat Simple_repeat 1 23 0 791 259 135 62 chr5 181414675 181415015 -18215135 + MSTD LTR MaLR 1 396 0 904 224 157 0 chr5 181415269 181415550 -18214600 - MER58B DNA MER1_type -16 325 1 510 252 152 7 chr5 181415753 181415904 -18214246 - MER5A DNA MER1_type -8 181 9 396 125 0 0 chr5 181417414 181417478 -18212672 + (TATG)n Simple_repeat Simple_repeat 2 65 0 189 394 71 0 chr5 181417800 181417899 -18212251 - L2 LINE L2 -68 3204 3099 202 136 0 23 chr5 181418051 181418095 -18212055 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 888 212 57 104 chr5 181418378 181418764 -18211386 - MLT1B LTR MaLR 0 390 23 186 133 0 0 chr5 181419400 181419430 -18210720 + (CA)n Simple_repeat Simple_repeat 1 30 0 235 326 35 35 chr5 181419926 181420067 -18210083 - MER20B DNA MER1_type -607 176 36 298 310 139 29 chr5 181420072 181420346 -18209804 - MLT1K LTR MaLR -29 559 256 180 302 48 0 chr5 181420653 181420716 -18209434 + MIR SINE MIR 77 142 -66 207 337 35 23 chr5 181421400 181421486 -18208664 + MIR3 SINE MIR 13 99 -109 206 274 137 14 chr5 181422100 181422173 -18207977 + MIR3 SINE MIR 127 208 0 303 332 134 26 chr5 181422285 181422708 -18207442 - L2 LINE L2 -84 3229 2761 270 211 18 0 chr5 181423943 181424000 -18206150 + MER63 DNA MER1_type 695 752 -309 237 178 0 0 chr5 181423995 181424040 -18206110 + MER63 DNA MER1_type 974 1018 -42 * 2079 141 7 0 chr5 181424396 181424702 -18205448 - AluJb SINE Alu -4 308 1 263 354 0 10 chr5 181425023 181425122 -18205028 - MLT1J1 LTR MaLR -132 314 217 368 217 12 0 chr5 181425385 181425468 -18204682 - MLT1J2 LTR MaLR -318 132 49 184 309 163 0 chr5 181426541 181426664 -18203486 - MIR SINE MIR -1 261 119 215 284 0 0 chr5 181427309 181427376 -18202774 + GA-rich Low_complexity Low_complexity 3 69 0 2264 103 3 10 chr5 181427403 181427713 -18202437 + AluSx SINE Alu 1 308 -4 226 273 15 0 chr5 181427714 181427780 -18202370 + (TA)n Simple_repeat Simple_repeat 1 67 0 234 0 0 0 chr5 181428390 181428416 -18201734 + (A)n Simple_repeat Simple_repeat 1 26 0 2006 169 72 58 chr5 181428523 181429025 -18201125 - MER67D LTR ERV1 -5 509 1 302 82 41 0 chr5 181429029 181429078 -18201072 + T-rich Low_complexity Low_complexity 3 53 0 249 108 0 0 chr5 181429072 181429109 -18201041 + (TCCCC)n Simple_repeat Simple_repeat 4 40 0 * 661 168 72 8 chr5 181429122 181429247 -18200903 - FLAM_C SINE Alu 0 133 1 212 0 36 0 chr5 181430000 181430028 -18200122 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 229 298 0 0 chr5 181430041 181430098 -18200052 + GA-rich Low_complexity Low_complexity 1 57 0 271 125 0 0 chr5 181430271 181430311 -18199839 + Alu SINE Alu 1 40 -263 2245 111 3 0 chr5 181430311 181430609 -18199541 + AluSx SINE Alu 11 309 -3 216 191 0 0 chr5 181430659 181430701 -18199449 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 614 109 61 0 chr5 181430815 181430937 -18199213 + L1MA7 LINE L1 6157 6290 -1 34 24 0 0 chr5 181430937 181430978 -18199172 + AT_rich Low_complexity Low_complexity 1 41 0 5024 288 125 28 chr5 181432910 181435145 -18195005 + L2 LINE L2 319 2903 -410 2368 100 3 0 chr5 181435145 181435455 -18194695 - AluY SINE Alu 0 311 1 5024 288 125 28 chr5 181435455 181435897 -18194253 + L2 LINE L2 2903 3300 -13 189 0 0 0 chr5 181436109 181436130 -18194020 + (TC)n Simple_repeat Simple_repeat 2 22 0 2096 115 3 3 chr5 181436130 181436418 -18193732 - AluSq SINE Alu -24 289 2 230 241 92 23 chr5 181436490 181436577 -18193573 - MIR3 SINE MIR -11 197 105 411 269 186 12 chr5 181437025 181437192 -18192958 - MIR SINE MIR -6 256 61 189 74 0 0 chr5 181439225 181439252 -18190898 + (TC)n Simple_repeat Simple_repeat 1 27 0 299 226 0 0 chr5 181439787 181439849 -18190301 + MER81 DNA DNA 1 62 -52 * 2017 110 10 157 chr5 181439844 181440353 -18189797 + MER39B LTR ERV1 220 653 0 231 262 33 0 chr5 181440456 181440517 -18189633 + Charlie8 DNA MER1_type 1355 1417 -1000 191 231 0 0 chr5 181440714 181440753 -18189397 + MIR3 SINE MIR 156 194 -14 252 300 70 79 chr5 181441592 181441819 -18188331 - MLT1J LTR MaLR -173 338 114 368 281 62 11 chr5 181442230 181442408 -18187742 + L1MEd LINE L1 636 822 -5297 234 0 0 0 chr5 181442795 181442821 -18187329 + (ATTAG)n Simple_repeat Simple_repeat 5 30 0 185 111 56 0 chr5 181443080 181443116 -18187034 + C-rich Low_complexity Low_complexity 6 43 0 222 118 0 0 chr5 181443595 181443629 -18186521 + (CTA)n Simple_repeat Simple_repeat 3 36 0 232 273 111 50 chr5 181443811 181443910 -18186240 + MIR SINE MIR 35 139 -69 234 273 15 15 chr5 181444064 181444130 -18186020 + MIR3 SINE MIR 92 157 -51 2280 128 0 6 chr5 181444265 181444578 -18185572 + AluSx SINE Alu 1 311 -1 27 29 0 0 chr5 181444631 181444665 -18185485 + AT_rich Low_complexity Low_complexity 1 34 0 25 31 0 0 chr5 181444939 181444971 -18185179 + AT_rich Low_complexity Low_complexity 1 32 0 254 279 48 0 chr5 181445806 181445910 -18184240 + MER103 DNA DNA 11 119 -47 1900 181 65 34 chr5 181446375 181446608 -18183542 - MSTA LTR MaLR 0 428 175 2004 123 7 17 chr5 181446608 181446908 -18183242 - AluSx SINE Alu -12 300 4 1900 181 65 34 chr5 181446908 181447089 -18183061 - MSTA LTR MaLR -253 175 1 7100 181 81 32 chr5 181447095 181447461 -18182689 - MSTB-int LTR MaLR -7 1644 1297 2151 135 0 0 chr5 181447461 181447757 -18182393 + AluSg SINE Alu 1 296 -14 7100 181 81 32 chr5 181447757 181448957 -18181193 - MSTB-int LTR MaLR -354 1297 1 2501 152 10 2 chr5 181448957 181449372 -18180778 - MSTB LTR MaLR 0 426 9 1831 133 13 55 chr5 181450335 181450644 -18179506 - AluSq SINE Alu -17 296 1 2432 91 0 0 chr5 181450729 181451037 -18179113 - AluSg SINE Alu -2 308 1 200 222 0 0 chr5 181451185 181451230 -18178920 + T-rich Low_complexity Low_complexity 1 45 0 193 348 199 12 chr5 181451265 181451426 -18178724 + MIR3 SINE MIR 8 198 -10 2833 3 0 0 chr5 181451865 181452171 -18177979 - AluYa5 SINE Alu -5 306 1 22 0 0 0 chr5 181452598 181452620 -18177530 + AT_rich Low_complexity Low_complexity 1 22 0 335 121 17 0 chr5 181453679 181453737 -18176413 + (TG)n Simple_repeat Simple_repeat 2 60 0 28 0 0 0 chr5 181453812 181453840 -18176310 + AT_rich Low_complexity Low_complexity 1 28 0 2370 50 0 7 chr5 181453840 181454141 -18176009 - L1PA5 LINE L1 -2 6152 5854 26172 82 5 5 chr5 181454141 181457869 -18172281 - L1P LINE L1 -2405 3741 12 21 36 0 0 chr5 181459164 181459192 -18170958 + AT_rich Low_complexity Low_complexity 1 28 0 324 85 0 0 chr5 181459529 181459576 -18170574 - MADE1 DNA Mariner -33 47 1 2076 125 3 31 chr5 181460312 181460633 -18169517 + AluSx SINE Alu 1 312 0 203 288 99 72 chr5 181460964 181461075 -18169075 - MIR3 SINE MIR -28 180 67 250 180 80 0 chr5 181461293 181461343 -18168807 - L2 LINE L2 0 3272 3219 250 149 15 15 chr5 181461487 181461532 -18168618 + (TA)n Simple_repeat Simple_repeat 1 48 -19 12997 155 19 24 chr5 181461532 181461674 -18168476 - Tigger1 DNA MER2_type 0 2418 2277 2404 88 0 3 chr5 181461674 181461980 -18168170 + AluY SINE Alu 7 311 0 12997 155 19 24 chr5 181461980 181464268 -18165882 - Tigger1 DNA MER2_type -141 2277 1 250 149 15 15 chr5 181464268 181464289 -18165861 + (TA)n Simple_repeat Simple_repeat 47 67 0 1050 219 100 61 chr5 181464342 181464804 -18165346 - MLT2B1 LTR ERVL -40 480 1 4994 97 7 1 chr5 181465092 181465776 -18164374 + LTR8 LTR ERV1 4 691 0 188 209 0 15 chr5 181466837 181466904 -18163246 + (TAAA)n Simple_repeat Simple_repeat 3 68 0 180 77 0 0 chr5 181467132 181467158 -18162992 + (GGAA)n Simple_repeat Simple_repeat 2 27 0 23 92 0 0 chr5 181467175 181467240 -18162910 + AT_rich Low_complexity Low_complexity 1 65 0 258 229 8 152 chr5 181468500 181468744 -18161406 - L1MC4 LINE L1 -2 8040 7832 2950 277 69 60 chr5 181468760 181470972 -18159178 - L1MC4a LINE L1 -242 7566 5335 986 240 84 69 chr5 181471077 181471456 -18158694 - MLT1D LTR MaLR -120 385 1 560 295 46 46 chr5 181472252 181472631 -18157519 - L3 LINE CR1 -4 1573 1109 50 42 0 0 chr5 181472825 181472896 -18157254 + AT_rich Low_complexity Low_complexity 1 71 0 335 60 40 0 chr5 181473212 181473262 -18156888 + MADE1 DNA Mariner 28 79 -1 541 301 102 12 chr5 181473771 181474113 -18156037 - L3 LINE CR1 -562 1015 643 385 316 53 37 chr5 181474710 181474897 -18155253 + MLT1K LTR MaLR 53 242 -346 1206 229 16 26 chr5 181475696 181476001 -18154149 - MLT1E LTR MaLR -4 589 288 1446 131 0 0 chr5 181476001 181476199 -18153951 - AluSg/x SINE Alu -3 309 112 276 216 0 0 chr5 181476199 181476250 -18153900 - AluJ/monomer SINE Alu -251 51 1 530 246 13 76 chr5 181476276 181476500 -18153650 - MLT1E LTR MaLR -346 247 38 254 399 81 14 chr5 181477557 181477705 -18152445 - L2 LINE L2 0 3272 3115 1043 273 70 29 chr5 181478000 181478516 -18151634 - MLT1F1 LTR MaLR -14 553 1 420 274 168 10 chr5 181480402 181480599 -18149551 - Charlie8 DNA MER1_type -2136 281 54 1656 202 6 25 chr5 181480601 181480918 -18149232 + AluJb SINE Alu 1 311 -1 2110 276 63 34 chr5 181481312 181482146 -18148004 + L1M2b LINE L1 1 1157 -6052 245 268 31 41 chr5 181482259 181482356 -18147794 + L1MA5 LINE L1 1055 1150 -6416 641 212 32 17 chr5 181482384 181482660 -18147490 - LTR21B LTR ERV1 0 438 118 2379 273 36 42 chr5 181482776 181484070 -18146080 - HERVFH21 LTR ERV1 0 7978 5501 251 297 68 50 chr5 181484271 181484826 -18145324 - HERVFH21 LTR ERV1 -1273 7126 6562 * 360 302 35 30 chr5 181484805 181485007 -18145143 - HERVFH21 LTR ERV1 -1837 5876 5674 587 238 5 45 chr5 181485008 181485277 -18144873 - HERVFH21 LTR ERV1 -435 6448 4969 13637 172 22 19 chr5 181485413 181489555 -18140595 - HERVFH21 LTR ERV1 -1196 5333 1248 2107 198 48 64 chr5 181489548 181490286 -18139864 - HERVFH21 LTR ERV1 -5951 578 41 * 383 169 7 103 chr5 181490270 181490406 -18139744 - HERVFH21 LTR ERV1 -6406 123 1 * 706 238 66 49 chr5 181490406 181490768 -18139382 - LTR21B LTR ERV1 0 438 29 5208 242 20 4 chr5 181490789 181492154 -18137996 + L1MA5 LINE L1 2111 3497 -4069 596 50 12 0 chr5 181492154 181492234 -18137916 + (GAAA)n Simple_repeat Simple_repeat 4 84 0 12215 201 36 28 chr5 181492236 181493021 -18137129 + L1MA5 LINE L1 3460 4237 -3328 2290 103 0 0 chr5 181493021 181493322 -18136828 - AluSc SINE Alu -8 301 1 466 242 92 17 chr5 181493328 181493448 -18136702 - FLAM_C SINE Alu -4 129 1 12215 201 36 28 chr5 181493448 181495754 -18134396 + L1MA5 LINE L1 4241 6580 -985 * 36568 36 29 2 chr5 181495752 181500252 -18129898 - L1PA2 LINE L1 -1503 4643 21 7884 11 1 0 chr5 181500252 181501836 -18128314 + L1PA2 LINE L1 4611 6195 0 6224 134 15 4 chr5 181501839 181502964 -18127186 + L1MA5 LINE L1 6576 7714 -5 275 48 0 24 chr5 181503119 181503161 -18126989 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1108 93 13 0 chr5 181503798 181503948 -18126202 - AluSp/q SINE Alu -8 305 154 645 299 121 48 chr5 181504160 181504354 -18125796 - L2 LINE L2 -1 3312 3134 2246 124 16 26 chr5 181504354 181504733 -18125417 - THE1C LTR MaLR 0 375 1 645 299 121 48 chr5 181504733 181505416 -18124734 - L2 LINE L2 -179 3134 1763 1462 187 33 97 chr5 181505475 181505865 -18124285 - MLT1A1 LTR MaLR 0 365 1 2000 205 35 42 chr5 181505865 181506022 -18124128 + L1MB5 LINE L1 5647 5804 -370 2114 118 10 0 chr5 181506022 181506319 -18123831 - AluSx SINE Alu -10 302 3 2000 205 35 42 chr5 181506319 181506682 -18123468 + L1MB5 LINE L1 5804 6163 -11 376 303 56 17 chr5 181507089 181507320 -18122830 + L1MC4a LINE L1 5656 5895 -1913 194 353 89 58 chr5 181507807 181508031 -18122119 + MIR SINE MIR 19 249 -13 2287 102 3 10 chr5 181508049 181508382 -18121768 - AluSx SINE Alu 0 331 1 2226 105 3 0 chr5 181508449 181508744 -18121406 - AluSq SINE Alu -17 296 1 261 311 139 68 chr5 181510325 181510720 -18119430 - L2 LINE L2 0 3272 2850 24 0 0 0 chr5 181510937 181510961 -18119189 + AT_rich Low_complexity Low_complexity 1 24 0 219 211 0 39 chr5 181510961 181511013 -18119137 + MIR SINE MIR 210 259 -3 540 193 275 0 chr5 181511232 181511403 -18118747 + MER20 DNA MER1_type 1 218 -1 22 56 0 0 chr5 181512132 181512168 -18117982 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 181512183 181512206 -18117944 + AT_rich Low_complexity Low_complexity 1 23 0 250 347 21 0 chr5 181512539 181512634 -18117516 + L2 LINE L2 2678 2774 -540 312 240 10 20 chr5 181513206 181513306 -18116844 + (TA)n Simple_repeat Simple_repeat 1 99 0 272 159 44 82 chr5 181513385 181513567 -18116583 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 407 180 58 12 chr5 181513450 181513622 -18116528 + (TA)n Simple_repeat Simple_repeat 1 180 0 26 74 0 0 chr5 181513622 181513676 -18116474 + AT_rich Low_complexity Low_complexity 1 54 0 236 221 50 55 chr5 181513725 181513906 -18116244 + (TA)n Simple_repeat Simple_repeat 1 180 0 774 258 0 5 chr5 181514600 181514790 -18115360 - MER5A DNA MER1_type 0 189 1 586 286 78 46 chr5 181515105 181515322 -18114828 + MIR SINE MIR 9 232 -30 182 315 110 24 chr5 181515408 181515535 -18114615 - MIR3 SINE MIR -30 178 41 218 388 9 56 chr5 181515598 181515734 -18114416 + MIR SINE MIR 20 144 -118 1547 203 3 13 chr5 181515734 181516040 -18114110 + AluJo SINE Alu 1 303 -9 218 388 9 56 chr5 181516040 181516117 -18114033 + MIR SINE MIR 144 223 -39 24 24 0 24 chr5 181516796 181516812 -18113338 + AT_rich Low_complexity Low_complexity 1 16 -25 707 24 0 0 chr5 181516812 181516896 -18113254 + L1PA5 LINE L1 6067 6150 -4 24 24 0 24 chr5 181516896 181516921 -18113229 + AT_rich Low_complexity Low_complexity 16 41 0 235 286 0 0 chr5 181517017 181517080 -18113070 + (TATG)n Simple_repeat Simple_repeat 3 65 0 360 0 0 0 chr5 181518349 181518389 -18111761 + (TG)n Simple_repeat Simple_repeat 1 40 0 309 328 49 8 chr5 181519396 181519518 -18110632 - MIR3 SINE MIR 0 208 82 328 313 35 9 chr5 181519620 181519735 -18110415 - MER5A DNA MER1_type -25 164 47 204 259 71 35 chr5 181520719 181520804 -18109346 - L2 LINE L2 -35 3237 3150 433 278 157 35 chr5 181521494 181521622 -18108528 - MIR SINE MIR 0 262 151 1879 167 0 3 chr5 181521622 181521921 -18108229 + AluJb SINE Alu 1 298 -14 433 278 157 35 chr5 181521921 181522022 -18108128 - MIR SINE MIR -111 151 5 208 143 0 0 chr5 181522556 181522591 -18107559 + (TTTTTG)n Simple_repeat Simple_repeat 5 39 0 2650 234 63 30 chr5 181523475 181524288 -18105862 - L1ME2 LINE L1 -7 6157 5318 768 291 6 13 chr5 181524320 181524636 -18105514 + L1M4 LINE L1 4958 5271 -875 2496 49 3 10 chr5 181524758 181525064 -18105086 + AluY SINE Alu 1 304 -7 337 255 198 45 chr5 181525226 181525383 -18104767 + MER5A DNA MER1_type 9 189 0 346 298 124 25 chr5 181525429 181525590 -18104560 + L2 LINE L2 2239 2415 -899 24 53 0 0 chr5 181525618 181525656 -18104494 + AT_rich Low_complexity Low_complexity 1 38 0 30 45 0 0 chr5 181527809 181527853 -18102297 + AT_rich Low_complexity Low_complexity 1 44 0 223 308 135 65 chr5 181528034 181528294 -18101856 - L2 LINE L2 -4 3309 3032 1305 152 10 39 chr5 181530796 181531205 -18098945 + L1MA9 LINE L1 5783 6312 0 611 238 138 28 chr5 181531458 181531748 -18098402 - LTR52 LTR ERVL -99 322 1 273 218 64 26 chr5 181532175 181532253 -18097897 - L2 LINE L2 -32 3281 3201 2066 92 29 4 chr5 181532256 181532537 -18097613 - AluSg SINE Alu -22 288 1 587 102 23 0 chr5 181534185 181534273 -18095877 - L1PA10 LINE L1 -2 6166 6077 1758 127 0 44 chr5 181535297 181535572 -18094578 - AluSx SINE Alu -35 277 15 198 0 0 0 chr5 181535589 181535611 -18094539 + (T)n Simple_repeat Simple_repeat 1 22 0 536 274 29 95 chr5 181535727 181536074 -18094076 - L1ME3A LINE L1 -68 6102 5779 271 235 48 0 chr5 181536075 181536162 -18093988 + L1ME LINE L1 5749 5836 -330 226 73 49 0 chr5 181536209 181536250 -18093900 + (CATTT)n Simple_repeat Simple_repeat 3 45 0 243 0 0 0 chr5 181536898 181536925 -18093225 + (T)n Simple_repeat Simple_repeat 1 27 0 202 385 60 12 chr5 181537316 181537482 -18092668 - MER5A DNA MER1_type -10 179 6 1093 212 0 69 chr5 181537605 181537850 -18092300 - MER8 DNA MER2_type -11 228 1 22 0 0 0 chr5 181540294 181540316 -18089834 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 181540588 181540623 -18089527 + AT_rich Low_complexity Low_complexity 1 35 0 2060 110 0 7 chr5 181541347 181541639 -18088511 + AluSc SINE Alu 19 308 -1 277 322 17 35 chr5 181542144 181542259 -18087891 - MIR SINE MIR -104 158 46 1308 168 32 5 chr5 181542462 181542710 -18087440 - AluSx SINE Alu 0 310 57 14759 123 20 34 chr5 181543250 181544775 -18085375 + Tigger1 DNA MER2_type 1 1479 -939 881 182 0 29 chr5 181544775 181544945 -18085205 - FRAM SINE Alu -1 165 1 14759 123 20 34 chr5 181544945 181545872 -18084278 + Tigger1 DNA MER2_type 1479 2418 0 241 241 0 0 chr5 181545888 181545946 -18084204 + MER53 DNA DNA 1 58 -131 182 128 26 0 chr5 181548360 181548399 -18081751 + CT-rich Low_complexity Low_complexity 4 43 0 292 364 53 0 chr5 181549364 181549515 -18080635 - MLT1I LTR MaLR -1 408 250 2290 86 26 10 chr5 181549723 181550027 -18080123 + AluSc SINE Alu 1 309 0 306 294 65 54 chr5 181550257 181550441 -18079709 + MIR SINE MIR 13 198 -64 2141 99 0 0 chr5 181550969 181551261 -18078889 + AluY SINE Alu 1 292 -19 28 0 0 0 chr5 181551261 181551289 -18078861 + AT_rich Low_complexity Low_complexity 1 28 0 6493 236 72 58 chr5 181551522 181551860 -18078290 - L1ME LINE L1 -651 5584 5252 330 26 0 0 chr5 181551860 181551899 -18078251 + (TTA)n Simple_repeat Simple_repeat 1 39 0 2015 119 0 4 chr5 181551902 181552180 -18077970 - AluSq SINE Alu -30 283 7 6493 236 72 58 chr5 181552180 181552271 -18077879 - L1ME LINE L1 -984 5251 5163 752 34 0 0 chr5 181552271 181552359 -18077791 - L1PA7 LINE L1 -8 6146 6059 6493 236 72 58 chr5 181552359 181554421 -18075729 - L1ME LINE L1 -1072 5163 2992 1926 150 3 14 chr5 181554421 181554715 -18075435 + AluSx SINE Alu 1 291 -21 6493 236 72 58 chr5 181554715 181555701 -18074449 - L1ME LINE L1 -3243 2992 2021 252 253 30 0 chr5 181556045 181556144 -18074006 + AluJ/FLAM SINE Alu 1 102 -200 398 270 49 0 chr5 181556633 181556796 -18073354 - L1ME LINE L1 -4205 2191 2021 * 713 268 89 15 chr5 181556790 181557115 -18073035 - L1ME LINE L1 -4642 1754 1406 751 196 8 0 chr5 181557140 181557273 -18072877 + AluJo SINE Alu 1 134 -178 567 232 135 38 chr5 181557298 181557617 -18072533 - L1ME LINE L1 -5020 1376 1027 212 238 12 0 chr5 181557624 181557708 -18072442 + (TA)n Simple_repeat Simple_repeat 2 86 0 243 0 0 0 chr5 181557708 181557735 -18072415 + (CA)n Simple_repeat Simple_repeat 2 28 0 1622 215 11 5 chr5 181557736 181558108 -18072042 + L1 LINE L1 3988 4361 -1785 24 32 0 0 chr5 181558120 181558151 -18071999 + AT_rich Low_complexity Low_complexity 1 31 0 287 231 75 22 chr5 181558151 181558285 -18071865 - L1MC/D LINE L1 -2351 5457 5317 201 39 0 0 chr5 181558302 181558328 -18071822 + (TG)n Simple_repeat Simple_repeat 2 27 0 2051 133 7 7 chr5 181558404 181558704 -18071446 - AluSq SINE Alu -12 301 2 197 191 0 48 chr5 181559650 181559692 -18070458 - MIR SINE MIR -116 146 107 2290 62 28 0 chr5 181559797 181559963 -18070187 - AluY SINE Alu -13 298 119 252 0 0 0 chr5 181559963 181559991 -18070159 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 2290 62 28 0 chr5 181559991 181560114 -18070036 - AluY SINE Alu -192 119 1 432 316 65 0 chr5 181560141 181560280 -18069870 + L2 LINE L2 3125 3272 0 295 278 78 0 chr5 181560462 181560552 -18069598 - MLT1H LTR MaLR 0 549 453 216 0 0 0 chr5 181562302 181562326 -18067824 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 279 79 0 0 chr5 181562642 181562680 -18067470 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 1160 189 4 48 chr5 181563499 181563530 -18066620 - L1PB4 LINE L1 -7 6149 6118 777 156 0 0 chr5 181563530 181563658 -18066492 - FLAM_C SINE Alu -5 128 1 1160 189 4 48 chr5 181563658 181563875 -18066275 - L1PB4 LINE L1 -38 6118 5912 924 175 12 12 chr5 181563877 181564048 -18066102 + AluJb SINE Alu 137 307 -5 2359 88 3 3 chr5 181564345 181564653 -18065497 - AluSc SINE Alu -1 308 1 297 312 0 0 chr5 181565514 181565591 -18064559 + Charlie8 DNA MER1_type 2341 2417 0 620 226 122 0 chr5 181565724 181565888 -18064262 - MER5A DNA MER1_type 0 189 6 282 325 12 0 chr5 181566007 181566090 -18064060 + L2 LINE L2 3180 3263 -50 2117 136 0 0 chr5 181566108 181566403 -18063747 - AluSg SINE Alu -15 295 1 882 328 159 32 chr5 181567074 181568370 -18061780 + L2 LINE L2 1610 3070 -202 2099 118 7 3 chr5 181568378 181568682 -18061468 - AluSx SINE Alu 0 312 8 234 136 45 0 chr5 181569015 181569059 -18061091 + CT-rich Low_complexity Low_complexity 2 47 0 1407 212 35 59 chr5 181569140 181569368 -18060782 - MSTD LTR MaLR 0 396 181 2289 88 10 0 chr5 181569368 181569662 -18060488 - AluY SINE Alu -14 297 1 1407 212 35 59 chr5 181569662 181569839 -18060311 - MSTD LTR MaLR -215 181 1 216 0 0 0 chr5 181569919 181569943 -18060207 + (T)n Simple_repeat Simple_repeat 1 24 0 189 74 0 0 chr5 181570052 181570079 -18060071 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 492 278 105 5 chr5 181570135 181570326 -18059824 + MIR SINE MIR 53 262 0 202 347 67 13 chr5 181570350 181570425 -18059725 - L2 LINE L2 -49 3264 3186 736 279 39 5 chr5 181570425 181570633 -18059517 + MER58A DNA MER1_type 9 223 -1 268 309 66 50 chr5 181570691 181570872 -18059278 + MIR SINE MIR 33 216 -46 180 0 0 0 chr5 181571821 181571841 -18058309 + (A)n Simple_repeat Simple_repeat 1 20 0 6563 72 7 0 chr5 181572515 181573802 -18056348 - L1PA7 LINE L1 -13 6141 4842 1364 219 26 0 chr5 181573802 181574071 -18056079 - MLT1A1 LTR MaLR -80 285 10 393 283 17 40 chr5 181575192 181575365 -18054785 + Charlie8 DNA MER1_type 108 276 -2141 384 179 0 0 chr5 181575918 181575996 -18054154 + (CA)n Simple_repeat Simple_repeat 2 79 0 1688 237 82 45 chr5 181577741 181577828 -18052322 - L1MEc LINE L1 -3066 3149 3067 1910 153 3 14 chr5 181577828 181578122 -18052028 + AluSx SINE Alu 1 291 -21 1688 237 82 45 chr5 181578122 181578841 -18051309 - L1MEc LINE L1 -3148 3067 2313 395 234 28 83 chr5 181578856 181579108 -18051042 - L1MEc LINE L1 -4138 2258 2021 * 725 268 89 15 chr5 181579102 181579427 -18050723 - L1MEc LINE L1 -4642 1754 1406 751 196 8 0 chr5 181579452 181579585 -18050565 + AluJo SINE Alu 1 134 -178 567 232 135 38 chr5 181579610 181579929 -18050221 - L1MEc LINE L1 -5020 1376 1027 265 229 0 73 chr5 181579937 181580033 -18050117 + L1MC4 LINE L1 6614 6702 -1340 1633 225 88 14 chr5 181585603 181586092 -18044058 + MER63C DNA MER1_type 1 525 -405 884 256 29 0 chr5 181586093 181586300 -18043850 + MER58A DNA MER1_type 2 214 -10 648 242 42 74 chr5 181586310 181586525 -18043625 + MER63C DNA MER1_type 533 740 -190 821 241 88 50 chr5 181586580 181586921 -18043229 + MLT1C LTR MaLR 37 390 -77 729 191 48 6 chr5 181586971 181587139 -18043011 + MER63C DNA MER1_type 756 930 0 2377 81 0 10 chr5 181587622 181587931 -18042219 - AluSc SINE Alu -3 306 1 324 48 0 0 chr5 181589247 181589289 -18040861 + (CA)n Simple_repeat Simple_repeat 1 42 0 357 269 29 0 chr5 181589644 181589748 -18040402 + L1MB7 LINE L1 5636 5742 -422 1099 276 83 19 chr5 181590074 181590649 -18039501 - L1M4 LINE L1 -2170 3976 3365 367 365 0 0 chr5 181590941 181591089 -18039061 + C-rich Low_complexity Low_complexity 1 148 0 26 64 0 0 chr5 181591819 181591866 -18038284 + AT_rich Low_complexity Low_complexity 1 47 0 1483 216 81 0 chr5 181592772 181593143 -18037007 + L1MB7 LINE L1 5773 6173 -11 2497 7 4 4 chr5 181593315 181593626 -18036524 + AluYa5 SINE Alu 1 311 0 3797 145 25 16 chr5 181593849 181594530 -18035620 + L1MB3 LINE L1 5495 6181 -2 274 374 113 18 chr5 181595496 181595718 -18034432 - MIR SINE MIR -16 246 4 298 270 133 42 chr5 181596132 181596371 -18033779 - MLT1L LTR MaLR -158 436 202 1092 224 15 0 chr5 181596653 181596921 -18033229 + L1MA4 LINE L1 6024 6295 -5 1914 155 0 3 chr5 181596925 181597222 -18032928 + AluSx SINE Alu 1 296 -16 412 286 141 21 chr5 181597739 181597931 -18032219 - MIR SINE MIR -8 254 40 195 328 0 0 chr5 181598698 181598756 -18031394 + L2 LINE L2 3208 3265 -7 240 59 0 0 chr5 181600108 181600142 -18030008 + (TG)n Simple_repeat Simple_repeat 2 35 0 191 272 161 12 chr5 181600253 181600334 -18029816 + MIR SINE MIR 60 152 -110 333 332 89 58 chr5 181601766 181602161 -18027989 + L2 LINE L2 2862 3268 -4 188 305 119 17 chr5 181602232 181602350 -18027800 + MIR SINE MIR 10 139 -123 28 0 0 0 chr5 181602688 181602716 -18027434 + AT_rich Low_complexity Low_complexity 1 28 0 33 0 0 0 chr5 181604231 181604264 -18025886 + AT_rich Low_complexity Low_complexity 1 33 0 373 313 35 0 chr5 181604390 181604505 -18025645 - MER94 DNA DNA 0 134 16 2155 131 0 3 chr5 181604774 181605087 -18025063 + AluSx SINE Alu 1 312 0 599 237 148 62 chr5 181605189 181605493 -18024657 + MER102b DNA MER1_type 2 331 -10 2127 117 3 13 chr5 181605727 181606036 -18024114 + AluSx SINE Alu 3 308 -4 21 0 0 0 chr5 181607420 181607441 -18022709 + AT_rich Low_complexity Low_complexity 1 21 0 5420 77 11 10 chr5 181607511 181608420 -18021730 + L1PA8 LINE L1 5082 5991 -181 1930 131 19 44 chr5 181608420 181608740 -18021410 + AluSx SINE Alu 1 312 0 239 306 16 8 chr5 181609642 181609763 -18020387 + (TA)n Simple_repeat Simple_repeat 1 122 0 2550 37 7 0 chr5 181610187 181610487 -18019663 + AluY SINE Alu 1 302 -9 207 273 0 0 chr5 181611520 181611564 -18018586 + (CCA)n Simple_repeat Simple_repeat 2 45 0 220 299 0 0 chr5 181611575 181611642 -18018508 + A-rich Low_complexity Low_complexity 1 67 0 21 0 0 0 chr5 181611715 181611736 -18018414 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 181614798 181614826 -18015324 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 181617414 181617442 -18012708 + AT_rich Low_complexity Low_complexity 1 28 0 368 371 105 22 chr5 181618271 181618681 -18011469 - L2 LINE L2 0 3272 2829 268 352 73 47 chr5 181618748 181619049 -18011101 - L2 LINE L2 -601 2713 2405 993 298 26 31 chr5 181619106 181619492 -18010658 + L2 LINE L2 2004 2387 -927 316 85 0 0 chr5 181619501 181619548 -18010602 + MADE1 DNA Mariner 34 80 0 371 180 54 36 chr5 181619650 181619761 -18010389 - L2 LINE L2 -675 2639 2527 * 388 322 123 45 chr5 181619756 181620138 -18010012 + L2 LINE L2 2902 3313 0 809 243 45 23 chr5 181621237 181621512 -18008638 + L1ME2 LINE L1 5878 6163 -3 10575 205 50 26 chr5 181621653 181622182 -18007968 + L1M3 LINE L1 15 530 -5852 2041 135 0 23 chr5 181622182 181622486 -18007664 + AluSx SINE Alu 1 297 -15 10575 205 50 26 chr5 181622486 181626024 -18004126 + L1M3 LINE L1 530 4184 -2198 606 120 43 0 chr5 181626024 181626116 -18004034 - LTR12 LTR ERV1 -4 710 615 362 253 10 0 chr5 181626118 181626217 -18003933 - LTR30 LTR ERV1 -79 643 544 1435 143 79 43 chr5 181626217 181626635 -18003515 - LTR12 LTR ERV1 -417 2021 1 301 256 37 0 chr5 181626635 181626717 -18003433 + L1M3 LINE L1 4177 4261 -2121 587 99 0 0 chr5 181626718 181626799 -18003351 + AluY SINE Alu 1 81 -229 5283 212 33 25 chr5 181626803 181628309 -18001841 + L1M3 LINE L1 4254 5768 -651 371 267 12 0 chr5 181628413 181628499 -18001651 - MIR SINE MIR -169 93 7 380 238 0 49 chr5 181628600 181628722 -18001428 + MIR SINE MIR 119 234 -28 304 291 47 0 chr5 181628916 181629002 -18001148 - LTR33 LTR ERVL -134 387 298 571 279 60 60 chr5 181629084 181629353 -18000797 - LTR33 LTR ERVL -252 269 1 1479 217 22 28 chr5 181630994 181631354 -17998796 + MLT1C LTR MaLR 110 467 0 1239 212 110 42 chr5 181632735 181633173 -17996977 - MLT1C LTR MaLR -2 465 6 505 337 6 6 chr5 181633906 181634078 -17996072 - MIR SINE MIR -89 173 2 1324 147 0 36 chr5 181634488 181634712 -17995438 + AluSg/x SINE Alu 76 291 -19 259 200 136 64 chr5 181635651 181635776 -17994374 + MIR SINE MIR 72 205 -57 21 0 0 0 chr5 181636371 181636392 -17993758 + AT_rich Low_complexity Low_complexity 1 21 0 300 227 15 0 chr5 181637037 181637103 -17993047 - L1MCa LINE L1 -4362 2064 1998 22 56 0 0 chr5 181637112 181637148 -17993002 + AT_rich Low_complexity Low_complexity 1 36 0 271 287 42 63 chr5 181637630 181637827 -17992323 + L1MC4a LINE L1 4810 5009 -1137 1388 211 4 8 chr5 181637844 181638110 -17992040 + AluJo SINE Alu 3 267 -45 1091 297 39 32 chr5 181638306 181638923 -17991227 + L1MC4a LINE L1 5260 5880 -1928 2308 104 0 0 chr5 181639294 181639603 -17990547 + AluSc SINE Alu 1 309 0 203 183 33 17 chr5 181639744 181639804 -17990346 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 * 221 268 42 0 chr5 181639762 181639833 -17990317 + (TCTCTG)n Simple_repeat Simple_repeat 5 78 0 587 214 145 23 chr5 181639833 181640110 -17990040 + L1MC4a LINE L1 6608 6789 -1019 335 276 55 31 chr5 181640289 181640452 -17989698 + L1MC4a LINE L1 7245 7411 -397 285 271 75 0 chr5 181640432 181640565 -17989585 + L1MC5 LINE L1 7302 7444 -517 * 183 80 0 0 chr5 181640590 181640615 -17989535 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 409 266 98 35 chr5 181640764 181640967 -17989183 + L1MC4 LINE L1 7741 7956 -86 2052 152 0 3 chr5 181641101 181641410 -17988740 + AluJb SINE Alu 1 308 -4 861 192 0 12 chr5 181642393 181642560 -17987590 - L1MC1 LINE L1 0 6333 6169 228 235 20 0 chr5 181642560 181642611 -17987539 + MER39 LTR ERV1 1 52 -655 993 206 245 21 chr5 181642649 181642961 -17987189 + MER39 LTR ERV1 223 629 -78 2433 76 3 0 chr5 181642961 181643265 -17986885 - AluSc SINE Alu -4 305 1 993 206 245 21 chr5 181643265 181643337 -17986813 + MER39 LTR ERV1 629 684 -23 1508 183 6 16 chr5 181643363 181643570 -17986580 - L1MC1 LINE L1 -162 6171 5967 2099 103 3 0 chr5 181643570 181643852 -17986298 - AluSq SINE Alu 0 313 31 1508 183 6 16 chr5 181643852 181643961 -17986189 - L1MC1 LINE L1 -366 5967 5858 1195 199 67 3 chr5 181644075 181644387 -17985763 - LTR37A LTR ERV1 0 426 95 453 202 99 50 chr5 181644523 181644785 -17985365 - Charlie2 DNA MER1_type -358 2504 2230 2396 93 0 0 chr5 181645013 181645324 -17984826 + AluY SINE Alu 1 311 0 2100 97 0 23 chr5 181645843 181646142 -17984008 + AluY SINE Alu 1 292 -19 268 256 11 44 chr5 181646367 181646457 -17983693 + MIR3 SINE MIR 121 207 -1 1044 240 102 0 chr5 181648833 181649137 -17981013 + MER58B DNA MER1_type 4 338 -3 1013 189 0 0 chr5 181649260 181649475 -17980675 + AluSq SINE Alu 136 313 0 999 253 46 30 chr5 181649475 181649870 -17980280 + L1MC4 LINE L1 7446 7846 -196 354 230 75 26 chr5 181650005 181650149 -17980001 + L1MC4 LINE L1 7895 7995 0 724 296 49 27 chr5 181650265 181650671 -17979479 + MLT2F LTR ERVL 4 418 -245 1878 108 90 11 chr5 181650740 181651017 -17979133 - AluSq SINE Alu -14 299 1 1604 190 0 37 chr5 181651049 181651369 -17978781 + AluSx SINE Alu 1 309 0 14092 134 35 7 chr5 181651611 181653962 -17976188 + Tigger1 DNA MER2_type 2 2418 0 388 273 40 0 chr5 181654031 181654130 -17976020 - MIR SINE MIR -61 147 45 261 347 24 24 chr5 181654745 181654869 -17975281 + MLT1K LTR MaLR 110 233 -355 238 271 83 21 chr5 181654971 181655067 -17975083 + MLT1K LTR MaLR 404 505 -83 198 208 0 0 chr5 181655082 181655135 -17975015 + CT-rich Low_complexity Low_complexity 2 54 0 1171 167 9 44 chr5 181657317 181657544 -17972606 + MER20 DNA MER1_type 1 219 0 232 333 14 21 chr5 181657763 181657904 -17972246 - Charlie2a DNA MER1_type 0 2862 2723 658 234 10 15 chr5 181657920 181658117 -17972033 - Charlie2a DNA MER1_type -1200 1662 1467 366 223 99 66 chr5 181658182 181658303 -17971847 + L2 LINE L2 3181 3305 -8 300 296 32 53 chr5 181658440 181658629 -17971521 - Charlie2a DNA MER1_type -2574 288 104 1255 177 98 80 chr5 181658654 181659043 -17971107 - MSTD LTR MaLR 0 396 1 613 154 34 81 chr5 181659365 181659514 -17970636 + FLAM_C SINE Alu 1 142 -1 468 277 76 22 chr5 181659974 181660158 -17969992 + L2 LINE L2 3103 3296 -17 374 311 17 17 chr5 181661086 181661205 -17968945 - MIR SINE MIR -71 191 73 2114 177 43 26 chr5 181661231 181661650 -17968500 - MSTB LTR MaLR 0 426 1 517 296 161 20 chr5 181663007 181663416 -17966734 + LTR50 LTR ERVL 329 795 0 1996 119 17 13 chr5 181665108 181665410 -17964740 - AluSq SINE Alu -10 303 1 324 307 50 27 chr5 181665759 181666059 -17964091 + L1ME LINE L1 5519 5825 -296 3872 20 0 0 chr5 181666422 181666869 -17963281 + L1PA2 LINE L1 5709 6155 0 1391 156 80 0 chr5 181667129 181667366 -17962784 - AluJb SINE Alu -15 297 42 2294 104 0 7 chr5 181667442 181667741 -17962409 - AluSc SINE Alu -12 297 1 361 296 66 62 chr5 181667984 181668210 -17961940 + MLT1I LTR MaLR 116 342 -67 300 271 105 49 chr5 181668378 181668644 -17961506 - HAL1b LINE L1 -66 1282 1002 364 248 76 34 chr5 181668671 181668909 -17961241 + L1MC5 LINE L1 7630 7877 -84 2168 117 3 16 chr5 181669002 181669318 -17960832 + AluSx SINE Alu 1 312 0 22 35 0 0 chr5 181669804 181669833 -17960317 + AT_rich Low_complexity Low_complexity 1 29 0 193 354 0 15 chr5 181669850 181669915 -17960235 + L3b LINE CR1 1288 1351 -232 7502 169 16 13 chr5 181670160 181670586 -17959564 + L1PB1 LINE L1 3535 3958 -2193 2018 140 0 23 chr5 181670586 181670894 -17959256 + AluSg SINE Alu 1 301 -9 7502 169 16 13 chr5 181670894 181672716 -17957434 + L1PB1 LINE L1 3958 5794 -357 572 62 12 0 chr5 181672716 181672797 -17957353 + (TA)n Simple_repeat Simple_repeat 2 83 0 7502 169 16 13 chr5 181672797 181673157 -17956993 + L1PB1 LINE L1 5794 6151 0 2091 71 0 30 chr5 181673257 181673526 -17956624 - AluY SINE Alu -12 299 39 527 231 45 57 chr5 181674288 181674552 -17955598 - L1MC5 LINE L1 -48 7913 7653 2176 119 0 33 chr5 181676296 181676598 -17953552 - AluSx SINE Alu -20 292 1 1478 184 7 52 chr5 181677831 181678136 -17952014 + AluJo SINE Alu 5 295 -17 2135 107 10 0 chr5 181678152 181678442 -17951708 - AluSp SINE Alu -20 293 1 376 344 31 19 chr5 181678717 181678877 -17951273 - L2 LINE L2 0 3272 3111 229 94 0 0 chr5 181678984 181679016 -17951134 + U7 snRNA snRNA 2 33 -30 2045 231 80 8 chr5 181679773 181680274 -17949876 - MLT1F LTR MaLR -1 541 5 629 263 21 36 chr5 181680708 181680902 -17949248 - MER20 DNA MER1_type 0 219 29 189 0 0 0 chr5 181680976 181680997 -17949153 + (TA)n Simple_repeat Simple_repeat 1 21 0 1654 195 6 22 chr5 181681486 181681799 -17948351 + AluJo SINE Alu 3 310 -2 5049 268 63 10 chr5 181681993 181683725 -17946425 + L1MB8 LINE L1 11 1818 -5037 678 220 28 88 chr5 181683725 181683837 -17946313 + MER5B DNA MER1_type 8 106 -72 2037 129 3 10 chr5 181683837 181684139 -17946011 - AluSx SINE Alu -12 300 1 678 220 28 88 chr5 181684139 181684208 -17945942 + MER5B DNA MER1_type 106 178 0 2000 148 0 3 chr5 181684462 181684766 -17945384 + AluSx SINE Alu 1 303 -9 29081 118 11 56 chr5 181685009 181691457 -17938693 + L1PA7 LINE L1 12 6153 -1 1032 297 23 17 chr5 181691453 181691935 -17938215 + L1MB8 LINE L1 1904 2388 -4571 * 411 305 94 65 chr5 181692112 181692420 -17937730 + L1MB8 LINE L1 2473 2789 -4349 1656 230 53 29 chr5 181692486 181695115 -17935035 + L1MB8 LINE L1 3073 5864 -1131 2319 103 0 0 chr5 181695115 181695417 -17934733 + AluSc SINE Alu 1 302 -7 1656 230 53 29 chr5 181695417 181696165 -17933985 + L1MB8 LINE L1 5864 6593 -402 1097 100 7 0 chr5 181696167 181696317 -17933833 - THE1C LTR MaLR 0 375 225 3678 129 3 83 chr5 181696317 181696510 -17933640 - THE1B-int LTR MaLR -935 645 438 1788 116 4 29 chr5 181696510 181696786 -17933364 - AluSx SINE Alu -21 291 23 3678 129 3 83 chr5 181696786 181697290 -17932860 - THE1B-int LTR MaLR -1142 438 4 1239 158 121 75 chr5 181697293 181697333 -17932817 - THE1B LTR MaLR 0 364 327 2113 106 65 0 chr5 181697333 181697626 -17932524 + AluSx SINE Alu 1 312 0 1239 158 121 75 chr5 181697626 181697933 -17932217 - THE1B LTR MaLR -37 327 1 1515 173 18 99 chr5 181697933 181698367 -17931783 + L1MB8 LINE L1 6591 6989 0 459 301 48 7 chr5 181698510 181698656 -17931494 - MIR SINE MIR -8 254 103 1792 229 66 34 chr5 181699626 181699720 -17930430 + LTR40a LTR ERVL 1 91 -428 1901 136 3 38 chr5 181699720 181700036 -17930114 - AluSx SINE Alu -7 305 1 1792 229 66 34 chr5 181700036 181700444 -17929706 + LTR40a LTR ERVL 91 519 0 2454 70 0 0 chr5 181700630 181700929 -17929221 - AluY SINE Alu -12 299 1 27 49 0 0 chr5 181700957 181700998 -17929152 + AT_rich Low_complexity Low_complexity 1 41 0 616 321 87 46 chr5 181702234 181702778 -17927372 - L2 LINE L2 0 3313 2743 2329 101 0 0 chr5 181702778 181703076 -17927074 - AluSg SINE Alu -12 298 1 616 321 87 46 chr5 181703076 181703172 -17926978 - L2 LINE L2 -570 2743 2652 23 33 0 0 chr5 181704040 181704070 -17926080 + AT_rich Low_complexity Low_complexity 1 30 0 2072 114 0 4 chr5 181706385 181706694 -17923456 - AluSc SINE Alu 0 308 1 191 390 60 0 chr5 181708618 181708718 -17921432 - L2 LINE L2 -33 3239 3134 447 332 126 20 chr5 181708756 181709003 -17921147 + MLT1K LTR MaLR 7 279 -309 429 265 52 15 chr5 181709055 181709191 -17920959 + MLT1K LTR MaLR 377 517 -71 240 167 0 0 chr5 181709193 181709241 -17920909 + (TATG)n Simple_repeat Simple_repeat 4 51 0 2219 68 68 0 chr5 181709436 181709717 -17920433 + AluY SINE Alu 1 300 -11 197 302 0 0 chr5 181710071 181710124 -17920026 + L3 LINE CR1 1524 1576 -1 265 268 123 51 chr5 181710709 181710847 -17919303 + LTR16C LTR ERVL 340 487 -4 362 314 98 10 chr5 181711396 181711590 -17918560 + MIR SINE MIR 41 251 -11 399 284 8 75 chr5 181711663 181711797 -17918353 + MIR3 SINE MIR 83 207 -1 21 36 0 0 chr5 181712304 181712332 -17917818 + AT_rich Low_complexity Low_complexity 1 28 0 218 28 0 56 chr5 181712480 181712516 -17917634 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 2830 157 8 4 chr5 181713056 181713539 -17916611 + MER31A LTR ERV1 1 485 0 7891 1 0 1 chr5 181714489 181715372 -17914778 - L1HS LINE L1 0 6155 5274 809 40 0 0 chr5 181715371 181715472 -17914678 + L1HS LINE L1 5185 5285 -861 * 261 324 0 15 chr5 181716791 181716859 -17913291 + MIR SINE MIR 3 69 -193 442 275 65 69 chr5 181716867 181717055 -17913095 - L1M4 LINE L1 -483 5695 5508 1502 220 0 29 chr5 181717055 181717368 -17912782 - AluJo SINE Alu -8 304 1 442 275 65 69 chr5 181717368 181717446 -17912704 - L1M4 LINE L1 -670 5508 5431 2203 116 0 13 chr5 181717446 181717747 -17912403 - AluSq SINE Alu -16 297 1 442 275 65 69 chr5 181717747 181717912 -17912238 - L1M4 LINE L1 -747 5431 5265 290 338 31 12 chr5 181717919 181718079 -17912071 + MIR SINE MIR 100 262 0 587 297 103 39 chr5 181718161 181718568 -17911582 + L1MCc LINE L1 4 436 -5987 241 206 68 27 chr5 181718872 181718945 -17911205 + L1MCc LINE L1 813 888 -5535 1590 278 73 43 chr5 181719086 181720003 -17910147 + L1MCc LINE L1 1128 2016 -5106 1793 163 10 3 chr5 181720003 181720310 -17909840 + AluJo SINE Alu 1 309 -3 1590 278 73 43 chr5 181720310 181721260 -17908890 + L1MCc LINE L1 2016 3249 -3873 1689 181 7 47 chr5 181721297 181721727 -17908423 - L1 LINE L1 -2271 3875 3463 3676 207 36 33 chr5 181721751 181722206 -17907944 + L1 LINE L1 3952 4404 -1742 255 61 0 0 chr5 181722206 181722239 -17907911 + (TAAAA)n Simple_repeat Simple_repeat 5 37 0 3676 207 36 33 chr5 181722239 181722726 -17907424 + L1 LINE L1 4404 4897 -1249 3197 138 25 17 chr5 181723468 181723991 -17906159 + MER1A DNA MER1_type 1 527 0 25 83 0 0 chr5 181724444 181724504 -17905646 + AT_rich Low_complexity Low_complexity 1 60 0 2001 121 11 14 chr5 181725641 181725950 -17904200 - AluSq SINE Alu 0 310 3 39 74 0 0 chr5 181725997 181726078 -17904072 + AT_rich Low_complexity Low_complexity 1 81 0 36 53 0 0 chr5 181726450 181726507 -17903643 + AT_rich Low_complexity Low_complexity 1 57 0 295 268 22 109 chr5 181728654 181728792 -17901358 + L2 LINE L2 3188 3313 0 1967 142 3 0 chr5 181730663 181730966 -17899184 - AluJb SINE Alu -8 304 1 269 315 287 7 chr5 181731079 181731365 -17898785 - L2 LINE L2 -1 3312 2947 269 259 223 18 chr5 181731432 181731598 -17898552 + L1MC/D LINE L1 5609 5808 -2000 908 181 24 6 chr5 181731799 181731965 -17898185 + FRAM SINE Alu 1 169 -7 520 195 31 13 chr5 181731979 181732138 -17898012 + GA-rich Low_complexity Low_complexity 3 164 0 2194 131 43 74 chr5 181732191 181732382 -17897768 + MSTB1 LTR MaLR 3 198 -234 2336 81 0 0 chr5 181732382 181732667 -17897483 + AluSx SINE Alu 1 285 -27 2194 131 43 74 chr5 181732667 181732919 -17897231 + MSTB1 LTR MaLR 198 432 0 1810 166 3 10 chr5 181733020 181733321 -17896829 + AluJo SINE Alu 6 304 -8 333 0 0 0 chr5 181734677 181734714 -17895436 + (TG)n Simple_repeat Simple_repeat 1 37 0 2140 142 0 0 chr5 181735466 181735777 -17894373 - AluSx SINE Alu -1 311 1 267 54 0 0 chr5 181735877 181735914 -17894236 + (TG)n Simple_repeat Simple_repeat 2 38 0 24 0 0 0 chr5 181738864 181738888 -17891262 + AT_rich Low_complexity Low_complexity 1 24 0 1024 143 7 0 chr5 181739198 181739372 -17890778 + AluSg/x SINE Alu 135 309 0 1642 52 0 19 chr5 181739780 181739990 -17890160 - AluY SINE Alu -1 310 105 1798 188 28 11 chr5 181741516 181741873 -17888277 + MLT1A1 LTR MaLR 1 363 -2 287 304 40 47 chr5 181742186 181742334 -17887816 - MIR3 SINE MIR -59 149 3 279 0 0 0 chr5 181743060 181743091 -17887059 + (TC)n Simple_repeat Simple_repeat 1 31 0 296 279 96 70 chr5 181743208 181743437 -17886713 + MIR SINE MIR 3 237 -25 353 263 37 100 chr5 181743622 181743812 -17886338 - L2 LINE L2 0 3313 3136 189 74 0 0 chr5 181743857 181743884 -17886266 + (TAA)n Simple_repeat Simple_repeat 1 27 0 2195 109 0 28 chr5 181745001 181745322 -17884828 + AluSx SINE Alu 1 312 0 23 0 0 0 chr5 181745737 181745760 -17884390 + AT_rich Low_complexity Low_complexity 1 23 0 180 300 80 10 chr5 181746908 181747008 -17883142 + L3 LINE CR1 1306 1412 -165 2209 97 27 3 chr5 181747763 181748062 -17882088 - AluSx SINE Alu -6 306 1 220 238 48 48 chr5 181748955 181749039 -17881111 + L2 LINE L2 3230 3313 0 291 54 0 0 chr5 181749357 181749394 -17880756 + (CA)n Simple_repeat Simple_repeat 1 37 0 33 43 0 0 chr5 181749766 181749813 -17880337 + AT_rich Low_complexity Low_complexity 1 47 0 2005 138 3 0 chr5 181749941 181750224 -17879926 + AluSx SINE Alu 1 284 -28 23 33 0 0 chr5 181750225 181750255 -17879895 + AT_rich Low_complexity Low_complexity 1 30 0 336 354 58 52 chr5 181750915 181751243 -17878907 + L3 LINE CR1 1211 1540 -37 193 355 89 8 chr5 181753089 181753213 -17876937 - L2 LINE L2 -36 3236 3103 192 200 0 0 chr5 181753546 181753596 -17876554 + (CAG)n Simple_repeat Simple_repeat 3 52 0 921 204 38 107 chr5 181754430 181754580 -17875570 - Zaphod DNA AcHobo -1 4030 3871 7009 62 1 0 chr5 181754580 181755708 -17874442 + L1PA5 LINE L1 5024 6152 -2 921 204 38 107 chr5 181755708 181755930 -17874220 - Zaphod DNA AcHobo -160 3871 3684 37 39 0 0 chr5 181755936 181755987 -17874163 + AT_rich Low_complexity Low_complexity 1 51 0 7951 160 130 39 chr5 181756064 181757518 -17872632 + MER52A LTR ERV1 1 1616 -139 3414 131 84 16 chr5 181757518 181758090 -17872060 + LTR9 LTR ERV1 2 612 0 7951 160 130 39 chr5 181758090 181758244 -17871906 + MER52A LTR ERV1 1616 1755 0 274 208 42 17 chr5 181758255 181758375 -17871775 - Zaphod DNA AcHobo -308 3723 3601 944 254 29 0 chr5 181758457 181758662 -17871488 - MER58A DNA MER1_type -13 211 1 8022 241 75 40 chr5 181758662 181760478 -17869672 - Zaphod DNA AcHobo -732 3299 1326 3314 102 2 0 chr5 181760478 181760930 -17869220 - MLT2A2 LTR ERVL 0 453 1 8022 241 75 40 chr5 181760930 181762290 -17867860 - Zaphod DNA AcHobo -2705 1326 14 587 275 67 0 chr5 181762412 181762590 -17867560 - LTR16C LTR ERVL -9 482 293 289 391 6 6 chr5 181762587 181762748 -17867402 - LTR16C LTR ERVL -330 161 1 * 29 47 0 0 chr5 181762748 181762791 -17867359 + AT_rich Low_complexity Low_complexity 1 43 0 228 241 19 0 chr5 181763224 181763278 -17866872 + CT-rich Low_complexity Low_complexity 1 55 0 2250 51 0 7 chr5 181763509 181763782 -17866368 + AluY SINE Alu 34 304 -7 207 0 0 0 chr5 181765675 181765698 -17864452 + (A)n Simple_repeat Simple_repeat 1 23 0 180 0 0 0 chr5 181766462 181766482 -17863668 + (T)n Simple_repeat Simple_repeat 1 20 0 460 160 0 21 chr5 181767311 181767405 -17862745 - L1MA6 LINE L1 -4 6296 6205 195 271 169 0 chr5 181767747 181767806 -17862344 + MIR SINE MIR 123 191 -71 195 315 19 0 chr5 181767811 181767865 -17862285 - L3 LINE CR1 -7 1570 1516 714 149 43 77 chr5 181767868 181768076 -17862074 - MER33 DNA MER1_type 0 363 163 489 239 36 14 chr5 181768094 181768232 -17861918 - MER33 DNA MER1_type -175 149 9 247 96 96 0 chr5 181768519 181768571 -17861579 - BSR/Beta Satellite Satellite -49 93 37 328 300 72 36 chr5 181769027 181769250 -17860900 - L1ME4a LINE L1 -57 6064 5834 315 326 62 22 chr5 181769420 181769693 -17860457 - L1ME4a LINE L1 -296 5825 5542 301 354 97 28 chr5 181769768 181770192 -17859958 - L1ME4a LINE L1 -752 5394 4942 256 139 0 0 chr5 181770354 181770397 -17859753 - MADE1 DNA Mariner -37 43 1 230 278 37 0 chr5 181770899 181771007 -17859143 + MER113 DNA MER1_type? 2 113 -408 22 88 0 0 chr5 181771071 181771128 -17859022 + AT_rich Low_complexity Low_complexity 1 57 0 588 271 11 6 chr5 181771215 181771392 -17858758 + MER5B DNA MER1_type 1 178 0 300 255 21 69 chr5 181771636 181771781 -17858369 + MER5A DNA MER1_type 44 181 -8 265 301 187 0 chr5 181773438 181773561 -17856589 - L2 LINE L2 -2 3311 3166 2645 162 206 54 chr5 181773623 181774340 -17855810 + LTR1B LTR ERV1 1 826 0 1043 163 163 0 chr5 181777251 181777466 -17852684 + L1MC1 LINE L1 6023 6272 -61 1271 152 118 48 chr5 181777466 181777781 -17852369 + MER44D DNA MER2_type 1 607 -2 315 100 0 0 chr5 181777808 181777858 -17852292 + L1MC1 LINE L1 6282 6331 -2 387 83 0 0 chr5 181778412 181778472 -17851678 + (CA)n Simple_repeat Simple_repeat 2 61 0 2355 90 0 3 chr5 181778529 181778840 -17851310 + AluY SINE Alu 1 310 -1 22 35 0 0 chr5 181780722 181780751 -17849399 + AT_rich Low_complexity Low_complexity 1 29 0 2433 76 0 0 chr5 181780852 181781153 -17848997 - AluY SINE Alu -10 301 1 21 36 0 0 chr5 181782744 181782772 -17847378 + AT_rich Low_complexity Low_complexity 1 28 0 186 103 0 0 chr5 181782905 181782934 -17847216 + (TA)n Simple_repeat Simple_repeat 1 29 0 180 208 62 21 chr5 181782951 181782999 -17847151 - MIR3 SINE MIR -42 166 117 216 295 0 9 chr5 181783928 181784045 -17846105 + (TTTA)n Simple_repeat Simple_repeat 1 115 0 391 345 29 6 chr5 181784438 181784609 -17845541 + MIR SINE MIR 88 262 0 2366 92 0 0 chr5 181785297 181785591 -17844559 - AluSx SINE Alu -18 294 1 189 333 0 0 chr5 181786322 181786385 -17843765 - MIR SINE MIR -4 258 196 209 184 0 0 chr5 181786385 181786423 -17843727 + (ATG)n Simple_repeat Simple_repeat 3 40 0 377 262 79 8 chr5 181786536 181786662 -17843488 - MIR SINE MIR -37 225 91 480 286 104 25 chr5 181786904 181787145 -17843005 + MLT1K LTR MaLR 248 507 -81 341 271 53 8 chr5 181787430 181787563 -17842587 + MIR SINE MIR 124 262 0 207 259 19 0 chr5 181789313 181789367 -17840783 + L2 LINE L2 3208 3262 -10 503 198 157 51 chr5 181792398 181792691 -17837459 - MER113 DNA MER1_type? -146 375 52 325 200 253 11 chr5 181792984 181793079 -17837071 - MER5A DNA MER1_type -12 177 60 501 242 86 0 chr5 181794172 181794300 -17835850 + L2 LINE L2 3133 3271 -1 1819 139 3 20 chr5 181794795 181795090 -17835060 - AluSx SINE Alu -22 290 1 207 0 0 0 chr5 181795521 181795544 -17834606 + (CAA)n Simple_repeat Simple_repeat 2 24 0 182 311 78 109 chr5 181795921 181796203 -17833947 - L2 LINE L2 -337 2977 2709 2194 105 3 3 chr5 181796203 181796498 -17833652 - AluSc SINE Alu -14 295 1 182 311 78 109 chr5 181796498 181796611 -17833539 - L2 LINE L2 -605 2709 2594 * 195 338 50 12 chr5 181796605 181796685 -17833465 + L2 LINE L2 3207 3289 -24 288 291 47 27 chr5 181798171 181798319 -17831831 - MIR3 SINE MIR -7 201 51 678 362 51 33 chr5 181798457 181798968 -17831182 - L3 LINE CR1 -1057 520 1 251 200 17 50 chr5 181799403 181799463 -17830687 - L2 LINE L2 0 3272 3215 4185 152 6 63 chr5 181799472 181800339 -17829811 - L1MA10 LINE L1 -85 6249 5433 234 0 0 0 chr5 181800406 181800432 -17829718 + (A)n Simple_repeat Simple_repeat 1 26 0 1322 214 11 21 chr5 181800504 181800784 -17829366 + MER90 LTR ERV1 338 614 0 402 211 78 47 chr5 181800784 181800911 -17829239 - MER20 DNA MER1_type -88 131 1 228 24 48 24 chr5 181802058 181802100 -17828050 + (TA)n Simple_repeat Simple_repeat 1 43 0 216 67 0 0 chr5 181802150 181802180 -17827970 + (TG)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr5 181803122 181803144 -17827006 + AT_rich Low_complexity Low_complexity 1 22 0 378 364 55 72 chr5 181804175 181804634 -17825516 + L2 LINE L2 2821 3271 -1 183 204 0 0 chr5 181804708 181804757 -17825393 + A-rich Low_complexity Low_complexity 1 49 0 257 118 0 0 chr5 181805371 181805422 -17824728 + L1MA3 LINE L1 6255 6305 0 295 282 221 7 chr5 181805440 181805589 -17824561 - MIR SINE MIR -56 206 26 28 0 0 0 chr5 181806984 181807012 -17823138 + AT_rich Low_complexity Low_complexity 1 28 0 336 316 43 74 chr5 181807277 181807603 -17822547 + L1MC/D LINE L1 5507 5822 -1986 29 0 0 0 chr5 181807899 181807928 -17822222 + AT_rich Low_complexity Low_complexity 1 29 0 639 269 68 32 chr5 181808516 181808735 -17821415 + MIR SINE MIR 36 262 0 244 359 43 0 chr5 181808784 181808901 -17821249 + MIR SINE MIR 24 145 -63 29 0 0 0 chr5 181809709 181809738 -17820412 + AT_rich Low_complexity Low_complexity 1 29 0 848 188 83 86 chr5 181809783 181810107 -17820043 - MER113 DNA MER1_type? -53 468 146 214 291 25 25 chr5 181810278 181810357 -17819793 + L2 LINE L2 3194 3272 0 712 220 21 37 chr5 181810574 181810765 -17819385 + MER5A DNA MER1_type 2 189 0 25 0 0 0 chr5 181812319 181812344 -17817806 + AT_rich Low_complexity Low_complexity 1 25 0 1750 173 0 13 chr5 181813330 181813630 -17816520 + AluJo SINE Alu 1 296 -16 233 276 0 26 chr5 181817992 181818068 -17812082 + GA-rich Low_complexity Low_complexity 1 74 0 243 0 0 0 chr5 181819207 181819234 -17810916 + (T)n Simple_repeat Simple_repeat 1 27 0 1946 172 15 3 chr5 181819296 181819639 -17810511 + MER7A DNA MER2_type 1 345 -1 2204 97 7 3 chr5 181819684 181819982 -17810168 + AluSq SINE Alu 1 299 -14 696 146 0 0 chr5 181820169 181820279 -17809871 + FAM SINE Alu 60 169 -16 406 300 33 0 chr5 181820399 181820519 -17809631 + L2 LINE L2 3185 3308 -5 305 282 61 30 chr5 181820543 181820674 -17809476 - MIR SINE MIR -35 227 93 232 231 0 0 chr5 181821580 181821632 -17808518 + L2 LINE L2 3261 3312 -1 185 258 15 30 chr5 181821880 181821946 -17808204 + MER5A DNA MER1_type 1 65 -124 224 372 0 0 chr5 181822245 181822323 -17807827 - MER91A DNA MER1_type -117 79 2 224 311 14 14 chr5 181823465 181823539 -17806611 - MER5A DNA MER1_type -24 165 92 312 287 88 44 chr5 181823936 181824029 -17806121 + MIR SINE MIR 63 150 -112 1956 159 0 3 chr5 181824029 181824331 -17805819 - AluSx SINE Alu -10 302 2 312 287 88 44 chr5 181824331 181824418 -17805732 + MIR SINE MIR 150 251 -11 285 338 81 12 chr5 181824464 181824624 -17805526 - MER5B DNA MER1_type -5 173 3 21 36 0 0 chr5 181824822 181824850 -17805300 + AT_rich Low_complexity Low_complexity 1 28 0 289 337 213 29 chr5 181824928 181825459 -17804691 - L2 LINE L2 0 3272 2571 2198 105 0 37 chr5 181825483 181825807 -17804343 + AluSx SINE Alu 1 312 0 759 256 68 29 chr5 181826203 181826334 -17803816 - HAL1 LINE L1 -152 2355 2231 393 22 0 0 chr5 181826334 181826380 -17803770 + (CA)n Simple_repeat Simple_repeat 2 47 0 759 256 68 29 chr5 181826380 181826599 -17803551 - HAL1 LINE L1 -276 2231 1991 587 280 125 44 chr5 181826642 181826938 -17803212 - HAL1 LINE L1 -626 1881 1562 642 249 51 11 chr5 181827266 181827443 -17802707 - MLT1J2 LTR MaLR -230 220 37 198 143 0 0 chr5 181827683 181827718 -17802432 + (TAA)n Simple_repeat Simple_repeat 2 36 0 295 241 121 0 chr5 181827805 181827888 -17802262 - MIR SINE MIR -95 167 75 269 281 73 10 chr5 181829728 181829824 -17800326 + MER5A DNA MER1_type 65 166 -23 706 287 56 19 chr5 181829838 181830054 -17800096 + MIR SINE MIR 34 257 -5 1077 230 140 113 chr5 181830186 181830656 -17799494 + MER21B LTR ERV1 41 523 -340 2735 169 85 67 chr5 181830657 181831371 -17798779 + LTR8A LTR ERV1 1 727 0 1988 197 39 125 chr5 181831371 181832123 -17798027 + LTR8A LTR ERV1 41 727 0 1532 226 34 0 chr5 181832123 181832419 -17797731 + MER21B LTR ERV1 521 826 -37 1397 119 66 43 chr5 181832484 181832925 -17797225 - LTR54 LTR ERV1 0 510 1 270 0 0 0 chr5 181834200 181834230 -17795920 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 329 274 132 80 chr5 181834984 181835510 -17794640 - L2 LINE L2 -1 3312 2714 501 127 0 38 chr5 181835511 181835590 -17794560 + Tigger2 DNA MER2_type 1 76 -2642 * 2402 149 59 2 chr5 181835570 181835992 -17794158 + Tigger2 DNA MER2_type 2273 2718 0 2252 94 10 3 chr5 181836005 181836312 -17793838 - AluSg SINE Alu -1 309 1 309 316 66 0 chr5 181836328 181836464 -17793686 - L2 LINE L2 -614 2700 2556 846 158 0 0 chr5 181836498 181836625 -17793525 - FLAM_C SINE Alu -16 127 1 392 263 45 50 chr5 181836627 181836825 -17793325 - L1ME3A LINE L1 -8 6162 5966 485 242 100 35 chr5 181836918 181837149 -17793001 - L1MC5 LINE L1 -427 7534 7289 554 253 28 6 chr5 181837222 181837404 -17792746 - L1MC5 LINE L1 -768 7193 7008 1974 258 65 3 chr5 181837457 181838026 -17792124 + L1ME1 LINE L1 5558 6161 -5 590 259 37 68 chr5 181838190 181838459 -17791691 - L1MC5 LINE L1 -1004 7038 6697 762 293 111 48 chr5 181838640 181839118 -17791032 - L2 LINE L2 -765 2549 2042 276 269 13 0 chr5 181839840 181839918 -17790232 + MER69 DNA AcHobo 1 79 -2447 2087 107 62 0 chr5 181839925 181840214 -17789936 - AluSx SINE Alu -5 307 1 292 268 52 0 chr5 181840214 181840311 -17789839 + MER69 DNA AcHobo 2425 2526 0 274 286 0 57 chr5 181840380 181840485 -17789665 + MIR SINE MIR 88 186 -76 380 359 53 0 chr5 181840495 181840626 -17789524 - L2 LINE L2 -1 3271 3134 243 284 0 45 chr5 181841186 181841253 -17788897 + MIR SINE MIR 4 67 -195 771 234 20 25 chr5 181841357 181841558 -17788592 + MIR SINE MIR 53 252 -10 216 211 0 19 chr5 181841558 181841610 -17788540 + (CTA)n Simple_repeat Simple_repeat 3 53 0 267 31 0 0 chr5 181841615 181841647 -17788503 + (CTG)n Simple_repeat Simple_repeat 2 33 0 1403 108 52 0 chr5 181842861 181843073 -17787077 + L1PA11 LINE L1 5950 6172 -2 532 271 130 14 chr5 181843269 181843476 -17786674 - MIR SINE MIR -18 244 14 1558 180 147 33 chr5 181843518 181843885 -17786265 + MSTB1 LTR MaLR 1 409 -23 1084 119 0 0 chr5 181843888 181844072 -17786078 + AluSg/x SINE Alu 144 327 0 275 254 18 53 chr5 181844108 181844222 -17785928 + MIR SINE MIR 36 145 -117 1010 207 73 107 chr5 181845286 181845696 -17784454 + MSTD LTR MaLR 1 396 0 517 298 99 23 chr5 181845875 181846369 -17783781 + Tigger8 DNA MER2_type 56 634 -32 782 184 211 32 chr5 181846674 181846864 -17783286 - MER58A DNA MER1_type 0 224 1 355 308 108 37 chr5 181847097 181847217 -17782933 - MIR SINE MIR -9 253 143 415 157 0 36 chr5 181847217 181847300 -17782850 - MADE1 DNA Mariner 0 80 1 355 308 108 37 chr5 181847300 181847393 -17782757 - MIR SINE MIR -119 143 25 312 337 55 32 chr5 181847495 181847712 -17782438 - MIR3 SINE MIR -49 213 2 25 51 0 0 chr5 181848827 181848866 -17781284 + AT_rich Low_complexity Low_complexity 1 39 0 538 282 33 142 chr5 181850123 181850517 -17779633 - L2 LINE L2 -2 3270 2920 708 249 10 48 chr5 181852747 181852956 -17777194 + MIR SINE MIR 62 262 0 298 335 87 0 chr5 181853065 181853226 -17776924 - L1ME LINE L1 -462 5659 5485 394 296 73 41 chr5 181854654 181854874 -17775276 + L2 LINE L2 2736 2962 -352 701 244 177 28 chr5 181854894 181855177 -17774973 - MLT1E LTR MaLR -258 335 11 * 903 222 39 10 chr5 181855150 181855353 -17774797 + MLT1F1 LTR MaLR 359 567 0 747 235 30 26 chr5 181855586 181855816 -17774334 - LTR1 LTR ERV1 -554 231 1 332 296 20 0 chr5 181855816 181855914 -17774236 + MIR SINE MIR 163 262 0 229 235 39 20 chr5 181856149 181856200 -17773950 + MIR SINE MIR 3 54 -208 22 0 0 0 chr5 181856241 181856263 -17773887 + AT_rich Low_complexity Low_complexity 1 22 0 411 115 0 26 chr5 181856285 181856363 -17773787 + L1PB1 LINE L1 6073 6148 -3 5479 101 0 1 chr5 181856386 181857150 -17773000 + L1PA10 LINE L1 5406 6168 0 188 306 252 0 chr5 181857172 181857283 -17772867 + L2 LINE L2 3167 3305 -8 33 0 0 0 chr5 181857386 181857419 -17772731 + AT_rich Low_complexity Low_complexity 1 33 0 504 330 53 29 chr5 181858198 181858407 -17771743 + MIR SINE MIR 34 247 -15 1504 209 29 20 chr5 181860375 181860725 -17769425 - MLT1A1 LTR MaLR -12 353 1 207 139 0 0 chr5 181860734 181860770 -17769380 + (TA)n Simple_repeat Simple_repeat 1 36 0 2135 50 0 4 chr5 181860921 181861179 -17768971 + AluY SINE Alu 1 257 -54 2233 148 25 59 chr5 181861215 181861654 -17768496 + MSTC LTR MaLR 1 424 -4 1663 199 60 9 chr5 181863222 181863569 -17766581 + MLT1A1 LTR MaLR 1 365 0 586 224 115 19 chr5 181863761 181863922 -17766228 - MER5A DNA MER1_type -1 188 4 297 294 50 17 chr5 181864136 181864255 -17765895 + MIR SINE MIR 124 246 -16 194 250 50 17 chr5 181864342 181864402 -17765748 - MIR3 SINE MIR -49 159 98 787 304 93 4 chr5 181864950 181865230 -17764920 + MER102b DNA MER1_type 33 337 -4 24 32 0 0 chr5 181865508 181865539 -17764611 + AT_rich Low_complexity Low_complexity 1 31 0 2086 149 0 13 chr5 181865660 181865975 -17764175 + AluSx SINE Alu 1 311 -1 1798 169 0 7 chr5 181866093 181866389 -17763761 + AluJb SINE Alu 1 294 -18 36 53 0 0 chr5 181867150 181867207 -17762943 + AT_rich Low_complexity Low_complexity 1 57 0 295 268 22 109 chr5 181869354 181869492 -17760658 + L2 LINE L2 3188 3313 0 252 86 0 0 chr5 181870133 181870168 -17759982 + (T)n Simple_repeat Simple_repeat 1 35 0 1967 142 3 0 chr5 181871371 181871674 -17758476 - AluJb SINE Alu -8 304 1 269 315 287 7 chr5 181871787 181872073 -17758077 - L2 LINE L2 -1 3312 2947 269 259 223 18 chr5 181872140 181872306 -17757844 + L1MC/D LINE L1 5609 5808 -2000 908 181 24 6 chr5 181872507 181872673 -17757477 + FRAM SINE Alu 1 169 -7 502 198 32 13 chr5 181872687 181872844 -17757306 + GA-rich Low_complexity Low_complexity 3 162 0 2194 131 43 74 chr5 181872889 181873080 -17757070 + MSTB1 LTR MaLR 3 198 -234 2336 81 0 0 chr5 181873080 181873365 -17756785 + AluSx SINE Alu 1 285 -27 2194 131 43 74 chr5 181873365 181873617 -17756533 + MSTB1 LTR MaLR 198 432 0 1825 165 3 10 chr5 181873718 181874021 -17756129 + AluJo SINE Alu 6 306 -6 303 28 0 0 chr5 181875377 181875413 -17754737 + (TG)n Simple_repeat Simple_repeat 2 37 0 2105 147 0 0 chr5 181876135 181876447 -17753703 - AluSx SINE Alu 0 312 1 372 22 0 0 chr5 181876547 181876592 -17753558 + (TG)n Simple_repeat Simple_repeat 2 46 0 24 0 0 0 chr5 181879542 181879566 -17750584 + AT_rich Low_complexity Low_complexity 1 24 0 1088 140 0 0 chr5 181879876 181880056 -17750094 + AluSg/x SINE Alu 133 312 0 1617 58 0 19 chr5 181880459 181880667 -17749483 - AluY SINE Alu -3 308 105 1798 188 28 11 chr5 181882188 181882545 -17747605 + MLT1A1 LTR MaLR 1 363 -2 287 304 40 47 chr5 181882858 181883006 -17747144 - MIR3 SINE MIR -59 149 3 333 0 0 0 chr5 181883732 181883769 -17746381 + (TC)n Simple_repeat Simple_repeat 1 37 0 296 279 96 70 chr5 181883886 181884115 -17746035 + MIR SINE MIR 3 237 -25 338 268 37 100 chr5 181884300 181884490 -17745660 - L2 LINE L2 0 3313 3136 189 74 0 0 chr5 181884535 181884562 -17745588 + (TAA)n Simple_repeat Simple_repeat 1 27 0 2192 101 3 28 chr5 181885673 181885990 -17744160 + AluSx SINE Alu 4 312 0 23 0 0 0 chr5 181886396 181886419 -17743731 + AT_rich Low_complexity Low_complexity 1 23 0 180 300 80 10 chr5 181887567 181887667 -17742483 + L3 LINE CR1 1306 1412 -165 2209 97 27 3 chr5 181888422 181888721 -17741429 - AluSx SINE Alu -6 306 1 220 238 48 48 chr5 181889614 181889698 -17740452 + L2 LINE L2 3230 3313 0 273 57 0 0 chr5 181890016 181890051 -17740099 + (CA)n Simple_repeat Simple_repeat 1 35 0 33 43 0 0 chr5 181890423 181890470 -17739680 + AT_rich Low_complexity Low_complexity 1 47 0 2005 138 3 0 chr5 181890598 181890881 -17739269 + AluSx SINE Alu 1 284 -28 23 33 0 0 chr5 181890882 181890912 -17739238 + AT_rich Low_complexity Low_complexity 1 30 0 336 354 58 52 chr5 181891572 181891900 -17738250 + L3 LINE CR1 1211 1540 -37 193 355 89 8 chr5 181893746 181893870 -17736280 - L2 LINE L2 -36 3236 3103 192 200 0 0 chr5 181894203 181894253 -17735897 + (CAG)n Simple_repeat Simple_repeat 3 52 0 439 240 85 8 chr5 181895085 181895214 -17734936 - Zaphod DNA AcHobo -1 4030 3892 4961 54 28 0 chr5 181895235 181896107 -17734043 + L1PA5 LINE L1 5029 5921 -233 1189 262 101 24 chr5 181896446 181896943 -17733207 - L1ME3A LINE L1 -6 6164 5630 2179 108 0 0 chr5 181897659 181897946 -17732204 - AluSg SINE Alu -23 287 1 301 187 36 54 chr5 181900217 181900383 -17729767 + (TTATA)n Simple_repeat Simple_repeat 4 166 0 350 351 15 23 chr5 181900951 181901120 -17729030 - MIR3 SINE MIR -43 165 39 23 68 0 0 chr5 181901534 181901578 -17728572 + AT_rich Low_complexity Low_complexity 1 44 0 944 239 9 22 chr5 181901704 181901926 -17728224 + MER20 DNA MER1_type 1 219 0 21 0 0 0 chr5 181901928 181901949 -17728201 + AT_rich Low_complexity Low_complexity 1 21 0 303 321 52 8 chr5 181902101 181902235 -17727915 + MIR SINE MIR 56 195 -67 2255 111 0 0 chr5 181902404 181902701 -17727449 - AluY SINE Alu -14 297 1 2296 95 3 13 chr5 181903297 181903613 -17726537 - AluSq SINE Alu 0 313 1 2153 100 7 10 chr5 181904779 181905079 -17725071 + AluSc SINE Alu 5 303 -6 247 328 118 17 chr5 181905684 181905803 -17724347 + L2 LINE L2 3142 3272 0 21 36 0 0 chr5 181906888 181906916 -17723234 + AT_rich Low_complexity Low_complexity 1 28 0 470 283 0 8 chr5 181908405 181908525 -17721625 - LTR28 LTR ERV1 0 1020 902 1966 182 93 124 chr5 181908606 181909369 -17720781 - LTR1B LTR ERV1 -81 745 7 24 32 0 0 chr5 181909516 181909547 -17720603 + AT_rich Low_complexity Low_complexity 1 31 0 1971 132 30 3 chr5 181909921 181910225 -17719925 - AluSx SINE Alu 0 312 1 407 302 90 56 chr5 181911367 181911635 -17718515 + L3 LINE CR1 1295 1571 -6 204 62 42 42 chr5 181912413 181912461 -17717689 + (TTTTG)n Simple_repeat Simple_repeat 4 51 0 2332 97 3 3 chr5 181912496 181912805 -17717345 + AluSc SINE Alu 1 309 0 418 271 9 9 chr5 181914025 181914132 -17716018 - MLT1I LTR MaLR -7 402 296 183 42 0 0 chr5 181914179 181914203 -17715947 + (TG)n Simple_repeat Simple_repeat 2 25 0 2231 108 0 20 chr5 181914701 181915007 -17715143 + AluSg SINE Alu 1 300 -10 2196 103 3 16 chr5 181915879 181916191 -17713959 - AluSg1 SINE Alu -1 308 1 285 250 80 11 chr5 181916194 181916282 -17713868 - MER103 DNA DNA -69 97 4 605 236 28 39 chr5 181916721 181916903 -17713247 - MIR SINE MIR -82 180 1 416 284 37 66 chr5 181917813 181918056 -17712094 + MIR SINE MIR 25 260 -2 22 35 0 0 chr5 181918958 181918987 -17711163 + AT_rich Low_complexity Low_complexity 1 29 0 297 0 0 0 chr5 181921165 181921198 -17708952 + (CA)n Simple_repeat Simple_repeat 2 34 0 29 0 0 0 chr5 181922326 181922355 -17707795 + AT_rich Low_complexity Low_complexity 1 29 0 1866 144 0 17 chr5 181922355 181922647 -17707503 - AluSx SINE Alu -20 292 6 341 292 75 31 chr5 181922705 181922866 -17707284 + L1ME4a LINE L1 5950 6117 -4 195 42 0 0 chr5 181922869 181922893 -17707257 + (GGAA)n Simple_repeat Simple_repeat 2 25 0 194 266 31 31 chr5 181923448 181923512 -17706638 + MER5A DNA MER1_type 34 97 -92 1829 237 70 72 chr5 181923811 181924184 -17705966 - L1ME3A LINE L1 -3 6167 5795 2259 101 3 0 chr5 181924184 181924481 -17705669 - AluSx SINE Alu -14 298 1 312 27 0 0 chr5 181924490 181924527 -17705623 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 1829 237 70 72 chr5 181924527 181924792 -17705358 - L1ME3A LINE L1 -383 5787 5523 216 0 0 0 chr5 181924792 181924816 -17705334 + (TG)n Simple_repeat Simple_repeat 2 25 0 1829 237 70 72 chr5 181924816 181924874 -17705276 - L1ME3A LINE L1 -647 5523 5459 1378 138 58 0 chr5 181924874 181925134 -17705016 - L1MA1 LINE L1 0 6302 6028 1829 237 70 72 chr5 181925134 181925180 -17704970 - L1ME3A LINE L1 -711 5459 5414 237 373 24 16 chr5 181925219 181925345 -17704805 - MER5B DNA MER1_type -51 127 1 183 240 98 115 chr5 181926840 181927023 -17703127 - L2 LINE L2 -58 3255 3076 192 355 94 14 chr5 181927181 181927319 -17702831 + L2 LINE L2 2201 2349 -965 1106 147 0 6 chr5 181927371 181927541 -17702609 - AluSg/x SINE Alu -10 302 134 2089 128 0 7 chr5 181927541 181927837 -17702313 - AluSx SINE Alu -18 294 1 269 226 31 132 chr5 181928026 181928185 -17701965 - L2 LINE L2 -81 3232 3090 4586 141 51 10 chr5 181928371 181929156 -17700994 + LTR1B LTR ERV1 8 824 -2 29 28 0 0 chr5 181929680 181929716 -17700434 + AT_rich Low_complexity Low_complexity 1 36 0 197 304 168 32 chr5 181930012 181930137 -17700013 + MIR SINE MIR 14 155 -107 414 118 24 12 chr5 181931280 181931365 -17698785 + CT-rich Low_complexity Low_complexity 3 88 0 673 306 99 34 chr5 181931749 181932364 -17697786 - L1ME2 LINE L1 -327 6231 5649 677 245 27 11 chr5 181932766 181932950 -17697200 - MER3 DNA MER1_type -21 188 2 252 300 129 21 chr5 181933165 181933545 -17696605 - L1ME2 LINE L1 -1539 5001 4581 716 266 103 72 chr5 181933651 181933739 -17696411 - L1ME2 LINE L1 -2129 4411 4327 1225 195 114 26 chr5 181933739 181934011 -17696139 + AluJo SINE Alu 2 297 -5 716 266 103 72 chr5 181934011 181934130 -17696020 - L1ME2 LINE L1 -2213 4327 4213 2099 115 0 20 chr5 181934130 181934435 -17695715 - AluSq SINE Alu -14 299 1 716 266 103 72 chr5 181934435 181935941 -17694209 - L1ME2 LINE L1 -2327 4213 2644 25 31 0 0 chr5 181936113 181936145 -17694005 + AT_rich Low_complexity Low_complexity 1 32 0 358 297 108 22 chr5 181936146 181936331 -17693819 - L2 LINE L2 0 3313 3113 192 40 0 0 chr5 181937121 181937146 -17693004 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 8392 31 0 0 chr5 181937205 181938987 -17691163 - L1PA3 LINE L1 0 6155 4384 293 285 92 54 chr5 181940927 181941352 -17688798 - L1ME2 LINE L1 -4081 2640 2200 451 300 41 10 chr5 181941368 181941661 -17688489 - L1ME2 LINE L1 -4564 1976 1799 896 308 55 32 chr5 181941816 181942164 -17687986 + MLT1E LTR MaLR 238 593 0 360 311 174 37 chr5 181942171 181942499 -17687651 - L1ME2 LINE L1 -4981 1549 1177 2020 126 0 3 chr5 181943006 181943330 -17686820 - AluSq SINE Alu 0 323 1 415 336 106 0 chr5 181943486 181943703 -17686447 + MIR SINE MIR 8 247 -15 227 263 0 0 chr5 181946397 181946454 -17683696 - LTR40c LTR ERVL -55 410 354 2208 97 30 0 chr5 181946456 181946755 -17683395 - AluSc SINE Alu -1 308 1 1038 283 48 0 chr5 181946825 181947097 -17683053 - LTR40a LTR ERVL -234 285 1 216 277 43 43 chr5 181947223 181947317 -17682833 - MIR SINE MIR -110 152 59 2112 131 3 6 chr5 181947588 181947901 -17682249 - AluSq SINE Alu -1 312 1 531 194 42 14 chr5 181948360 181948504 -17681646 + MER103 DNA DNA 4 151 -15 677 346 49 20 chr5 181949006 181949414 -17680736 + L1MEc LINE L1 36 455 -5941 303 274 43 32 chr5 181949743 181949929 -17680221 + L1MEc LINE L1 678 865 -5531 2076 195 81 11 chr5 181949967 181950459 -17679691 - LTR27 LTR ERV1 0 501 3 1710 246 112 63 chr5 181950464 181951660 -17678490 + L1MEc LINE L1 870 2123 -4273 5748 122 17 8 chr5 181953943 181954838 -17675312 + L1MA3 LINE L1 5374 6276 -29 367 336 55 44 chr5 181955076 181955442 -17674708 - MLT1L LTR MaLR -237 378 9 2764 270 58 18 chr5 181956803 181958038 -17672112 + L1MEc LINE L1 2224 3507 -2708 21 36 0 0 chr5 181958122 181958150 -17672000 + AT_rich Low_complexity Low_complexity 1 28 0 198 303 59 46 chr5 181958740 181958892 -17671258 + L2 LINE L2 1850 2003 -1311 258 192 0 0 chr5 181958897 181958949 -17671201 + (TG)n Simple_repeat Simple_repeat 2 53 0 413 331 95 34 chr5 181958962 181958981 -17671169 + L2 LINE L2 2035 2051 -1263 1773 156 0 7 chr5 181958981 181959256 -17670894 - AluSx SINE Alu -39 273 1 1803 202 58 11 chr5 181959263 181959709 -17670441 - MLT1C LTR MaLR 0 467 1 413 331 95 34 chr5 181959709 181959977 -17670173 + L2 LINE L2 2056 2348 -966 445 273 146 10 chr5 181960107 181960312 -17669838 + MIR SINE MIR 4 236 -26 309 391 72 8 chr5 181960581 181960816 -17669334 + L2 LINE L2 2812 3061 -211 304 293 8 106 chr5 181960867 181960990 -17669160 - L2 LINE L2 -3 3310 3200 212 333 0 0 chr5 181961399 181961468 -17668682 + MIR SINE MIR 82 150 -112 241 311 24 24 chr5 181962285 181962449 -17667701 + L1MCc LINE L1 17 180 -6243 746 255 37 80 chr5 181962802 181962984 -17667166 + L1MCc LINE L1 1129 1317 -5427 356 0 23 0 chr5 181962984 181963028 -17667122 + (TA)n Simple_repeat Simple_repeat 2 46 0 252 0 0 0 chr5 181963027 181963055 -17667095 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 746 255 37 80 chr5 181963028 181963459 -17666691 + L1MCc LINE L1 1317 1847 -4897 2072 191 11 3 chr5 181963475 181963853 -17666297 - MLT1B LTR MaLR -1 389 9 833 275 72 64 chr5 181963862 181963988 -17666162 + L1MCc LINE L1 1939 2062 -5060 2188 182 34 10 chr5 181963988 181964406 -17665744 - MSTA LTR MaLR 0 428 1 833 275 72 64 chr5 181964406 181964900 -17665250 + L1MCc LINE L1 2062 2564 -4558 425 316 44 0 chr5 181965985 181966143 -17664007 + MIR3 SINE MIR 33 197 -11 1206 36 0 0 chr5 181967498 181967636 -17662514 - AluY SINE Alu -15 296 159 261 0 0 0 chr5 181967638 181967667 -17662483 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 280 280 75 28 chr5 181967691 181967798 -17662352 + MIR SINE MIR 11 122 -140 490 353 70 9 chr5 181968057 181968510 -17661640 - MERVL LTR ERVL -2856 2140 1711 1290 161 0 0 chr5 181968560 181968765 -17661385 + MER2 DNA MER2_type 5 209 -136 660 270 105 5 chr5 181968904 181969104 -17661046 - MER58A DNA MER1_type -3 221 2 677 202 0 23 chr5 181969633 181969762 -17660388 + FLAM_A SINE Alu 1 126 -7 324 171 143 9 chr5 181970702 181970807 -17659343 - LTR33A LTR ERVL 0 523 405 263 355 65 27 chr5 181971050 181971236 -17658914 - LTR50 LTR ERVL -588 207 15 2882 158 33 0 chr5 181972024 181972504 -17657646 - MER41E LTR ERV1 -16 496 1 22 56 0 0 chr5 181972757 181972793 -17657357 + AT_rich Low_complexity Low_complexity 1 36 0 593 205 18 0 chr5 181972854 181972966 -17657184 - MLT1C LTR MaLR 0 467 354 260 193 35 0 chr5 181972970 181973027 -17657123 - MLT1C LTR MaLR -408 59 1 397 275 92 30 chr5 181975083 181975214 -17654936 + MER97c DNA MER1_type? 21 159 -931 2390 189 22 15 chr5 181975217 181975676 -17654474 + MLT1C LTR MaLR 6 467 0 21 0 0 0 chr5 181976345 181976366 -17653784 + AT_rich Low_complexity Low_complexity 1 21 0 286 179 0 26 chr5 181977313 181977391 -17652759 + GA-rich Low_complexity Low_complexity 1 76 0 21 57 0 0 chr5 181977410 181977445 -17652705 + AT_rich Low_complexity Low_complexity 1 35 0 1628 81 4 43 chr5 181977479 181977714 -17652436 + AluSx SINE Alu 1 226 -86 261 237 40 13 chr5 181977971 181978047 -17652103 + CT-rich Low_complexity Low_complexity 1 78 0 2127 111 0 63 chr5 181978055 181978406 -17651744 - AluSx SINE Alu 0 330 1 24 0 0 0 chr5 181978782 181978806 -17651344 + AT_rich Low_complexity Low_complexity 1 24 0 294 258 65 65 chr5 181979057 181979181 -17650969 + MER104 DNA Tc2 1 124 -56 28 61 0 0 chr5 181979257 181979306 -17650844 + AT_rich Low_complexity Low_complexity 1 49 0 26 50 0 0 chr5 181979636 181979676 -17650474 + AT_rich Low_complexity Low_complexity 1 40 0 475 282 82 23 chr5 181979823 181980043 -17650107 - L2 LINE L2 -39 3274 3042 2099 111 3 3 chr5 181981317 181981606 -17648544 - AluSx SINE Alu -22 290 2 41 48 0 0 chr5 181981774 181981836 -17648314 + AT_rich Low_complexity Low_complexity 1 62 0 224 315 105 26 chr5 181982210 181982349 -17647801 - MIR SINE MIR -54 154 6 216 219 0 31 chr5 181982428 181982492 -17647658 + CT-rich Low_complexity Low_complexity 3 64 0 560 242 87 0 chr5 181982823 181982984 -17647166 + MER96 DNA MER1_type 1 175 0 216 0 0 0 chr5 181982999 181983023 -17647127 + (T)n Simple_repeat Simple_repeat 1 24 0 225 0 0 0 chr5 181984329 181984354 -17645796 + (AAATG)n Simple_repeat Simple_repeat 4 28 0 202 343 130 29 chr5 181985157 181985364 -17644786 + L2 LINE L2 3045 3272 0 21 57 0 0 chr5 181986012 181986047 -17644103 + AT_rich Low_complexity Low_complexity 1 35 0 369 0 0 0 chr5 181986184 181986225 -17643925 + (TG)n Simple_repeat Simple_repeat 2 42 0 389 352 142 5 chr5 181987258 181987477 -17642673 + MIR SINE MIR 11 259 -3 197 132 26 0 chr5 181988259 181988297 -17641853 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 511 270 116 75 chr5 181988671 181989137 -17641013 + L2 LINE L2 2829 3313 0 209 296 41 128 chr5 181989617 181989860 -17640290 + L2 LINE L2 2978 3199 -73 181 220 20 20 chr5 181991156 181991206 -17638944 - L2 LINE L2 0 3313 3264 4504 183 26 26 chr5 181992322 181993745 -17636405 - L1MB3 LINE L1 -4 6179 4761 29 0 0 0 chr5 181993881 181993910 -17636240 + AT_rich Low_complexity Low_complexity 1 29 0 2260 201 85 25 chr5 181994124 181994712 -17635438 - LTR48B LTR ERV1 0 644 22 238 132 0 0 chr5 181994696 181994734 -17635416 - MER34C LTR ERV1 -512 73 36 * 400 319 30 24 chr5 181994783 181994949 -17635201 - MLT1H LTR MaLR -338 211 45 2091 129 0 10 chr5 181995296 181995606 -17634544 - AluSc SINE Alu 0 309 3 2595 139 25 11 chr5 181995619 181996059 -17634091 + Tigger2 DNA MER2_type 2273 2718 0 451 275 76 12 chr5 181996068 181996239 -17633911 - MIR SINE MIR -2 260 79 220 208 0 0 chr5 181996582 181996635 -17633515 + T-rich Low_complexity Low_complexity 1 53 0 8829 222 46 0 chr5 181996890 181999832 -17630318 + L1PA16 LINE L1 3160 6166 0 183 204 0 0 chr5 182000700 182000744 -17629406 + (CA)n Simple_repeat Simple_repeat 1 44 0 244 359 18 77 chr5 182001537 182001707 -17628443 + L2 LINE L2 2995 3154 -118 1313 196 77 24 chr5 182002222 182002779 -17627371 - MLT1E1 LTR MaLR 0 654 1 296 182 0 30 chr5 182002784 182002850 -17627300 - MER112 DNA MER1_type -136 124 61 305 217 48 24 chr5 182002866 182002949 -17627201 - MER112 DNA MER1_type -175 85 1 3543 92 56 0 chr5 182006890 182007411 -17622739 + HERVH LTR ERV1 3166 3715 -3998 1828 143 74 17 chr5 182007421 182007828 -17622322 + HERVH LTR ERV1 7277 7706 -7 180 0 0 0 chr5 182008072 182008092 -17622058 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 183 156 0 0 chr5 182008283 182008315 -17621835 + A-rich Low_complexity Low_complexity 2 33 0 198 350 94 40 chr5 182008783 182009006 -17621144 - L2 LINE L2 -272 3041 2807 475 60 12 84 chr5 182010470 182010484 -17619666 + MSTB1 LTR MaLR 354 367 -65 2020 124 41 0 chr5 182010484 182010774 -17619376 - AluSx SINE Alu -10 302 1 475 60 12 84 chr5 182010774 182010842 -17619308 + MSTB1 LTR MaLR 367 430 -2 2441 218 26 65 chr5 182010842 182011209 -17618941 + MST-int LTR MaLR 3 330 -1321 1917 112 0 7 chr5 182011209 182011485 -17618665 - AluSq SINE Alu -39 274 1 2441 218 26 65 chr5 182011485 182011820 -17618330 + MST-int LTR MaLR 330 677 -974 3529 123 28 19 chr5 182011978 182012801 -17617349 - HERVH LTR ERV1 -6695 1018 1 2507 85 125 5 chr5 182012803 182013203 -17616947 - LTR7 LTR ERV1 -2 448 1 216 0 0 0 chr5 182013217 182013241 -17616909 + (A)n Simple_repeat Simple_repeat 1 24 0 23 33 0 0 chr5 182013534 182013564 -17616586 + AT_rich Low_complexity Low_complexity 1 30 0 251 260 94 69 chr5 182013564 182013925 -17616225 + L1M4 LINE L1 3392 3761 -2385 390 268 49 32 chr5 182014028 182014151 -17615999 - MER5A DNA MER1_type -2 187 63 269 120 40 0 chr5 182014151 182014201 -17615949 + CT-rich Low_complexity Low_complexity 3 54 0 1136 88 6 6 chr5 182014305 182014475 -17615675 + HERVH LTR ERV1 3546 3715 -3998 2414 124 38 12 chr5 182014485 182014911 -17615239 + HERVH LTR ERV1 7277 7713 0 2454 77 138 5 chr5 182014911 182015302 -17614848 + LTR7 LTR ERV1 1 443 -7 1912 104 41 0 chr5 182015304 182015573 -17614577 - AluSc SINE Alu -29 280 1 12304 90 3 19 chr5 182015830 182017628 -17612522 - HERVH LTR ERV1 -4912 2801 1034 188 256 0 0 chr5 182018013 182018052 -17612098 + L2 LINE L2 2694 2732 -582 22 35 0 0 chr5 182018053 182018082 -17612068 + AT_rich Low_complexity Low_complexity 1 29 0 2025 144 0 3 chr5 182018098 182018397 -17611753 + AluSx SINE Alu 1 298 -14 2346 105 0 0 chr5 182019175 182019479 -17610671 - AluSx SINE Alu -8 304 1 468 0 0 0 chr5 182020335 182020387 -17609763 + (TGGA)n Simple_repeat Simple_repeat 2 53 0 287 279 292 6 chr5 182020909 182021070 -17609080 + MIR SINE MIR 53 259 -3 23 33 0 0 chr5 182022496 182022526 -17607624 + AT_rich Low_complexity Low_complexity 1 30 0 3028 151 6 4 chr5 182023198 182023715 -17606435 + L1MB2 LINE L1 5654 6171 0 22 35 0 0 chr5 182023889 182023918 -17606232 + AT_rich Low_complexity Low_complexity 1 29 0 200 146 0 21 chr5 182023953 182024001 -17606149 + (TA)n Simple_repeat Simple_repeat 1 47 0 184 358 44 29 chr5 182026313 182026450 -17603700 + L2 LINE L2 2871 3009 -263 23 92 0 0 chr5 182026810 182026875 -17603275 + AT_rich Low_complexity Low_complexity 1 65 0 2150 125 3 0 chr5 182026962 182027267 -17602883 - AluSx SINE Alu -6 306 1 324 193 28 0 chr5 182028001 182028110 -17602040 + (TA)n Simple_repeat Simple_repeat 1 112 0 297 283 78 33 chr5 182028348 182028528 -17601622 + MLT1K LTR MaLR 330 517 -71 197 262 29 122 chr5 182028599 182028771 -17601379 - MER5B DNA MER1_type -5 173 18 272 297 0 0 chr5 182029257 182029331 -17600819 + GA-rich Low_complexity Low_complexity 3 76 0 235 385 86 0 chr5 182029432 182029549 -17600601 - L2 LINE L2 -4 3268 3142 801 273 88 69 chr5 182030020 182030759 -17599391 - L1MEc LINE L1 -4603 1793 1041 2772 272 43 18 chr5 182030823 182031703 -17598447 - L1MEc LINE L1 -5458 938 37 2353 52 3 3 chr5 182032169 182032460 -17597690 - AluY SINE Alu -20 291 1 2455 62 0 3 chr5 182032713 182033019 -17597131 + AluY SINE Alu 1 305 -6 30 0 0 0 chr5 182033138 182033168 -17596982 + AT_rich Low_complexity Low_complexity 1 30 0 214 24 0 73 chr5 182035748 182035789 -17594361 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 21 0 0 0 chr5 182037304 182037325 -17592825 + AT_rich Low_complexity Low_complexity 1 21 0 21 82 0 0 chr5 182037585 182037634 -17592516 + AT_rich Low_complexity Low_complexity 1 49 0 315 0 0 0 chr5 182037662 182037697 -17592453 + (CA)n Simple_repeat Simple_repeat 2 36 0 2102 104 24 0 chr5 182037807 182038096 -17592054 + AluSc SINE Alu 3 298 -11 722 220 22 95 chr5 182038281 182038513 -17591637 - MIR SINE MIR -24 238 24 541 309 91 11 chr5 182038522 182038697 -17591453 - MER5A DNA MER1_type 0 189 1 2122 107 3 17 chr5 182040223 182040521 -17589629 + AluSq SINE Alu 1 294 -19 200 139 28 0 chr5 182041304 182041340 -17588810 + (TAA)n Simple_repeat Simple_repeat 2 38 0 280 280 83 76 chr5 182042282 182042439 -17587711 + MIR SINE MIR 32 189 -73 218 274 16 16 chr5 182042577 182042639 -17587511 + MIR SINE MIR 16 77 -131 1913 132 41 3 chr5 182043051 182043346 -17586804 - AluSg SINE Alu 0 310 5 24 0 0 0 chr5 182045259 182045283 -17584867 + AT_rich Low_complexity Low_complexity 1 24 0 2252 72 4 0 chr5 182045446 182045750 -17584400 - AluY SINE Alu 0 305 1 428 258 6 51 chr5 182046060 182046238 -17583912 - L1ME3A LINE L1 -219 5951 5782 401 289 33 22 chr5 182046251 182046431 -17583719 - L1ME3A LINE L1 -449 5672 5491 231 36 0 0 chr5 182046637 182046665 -17583485 + (A)n Simple_repeat Simple_repeat 1 28 0 25 51 0 0 chr5 182047120 182047159 -17582991 + AT_rich Low_complexity Low_complexity 1 39 0 269 246 14 0 chr5 182047639 182047708 -17582442 + L2 LINE L2 3243 3312 -1 180 97 0 0 chr5 182047897 182047928 -17582222 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 235 253 58 35 chr5 182048357 182048444 -17581706 - MLT1K LTR MaLR -340 248 160 435 236 173 78 chr5 182048931 182049122 -17581028 - MIR SINE MIR 0 262 54 1393 131 0 0 chr5 182049415 182049613 -17580537 + AluSg/x SINE Alu 105 302 -10 423 236 0 0 chr5 182051631 182051720 -17578430 + MIR SINE MIR 72 160 -102 253 266 0 0 chr5 182052096 182052160 -17577990 - MIR SINE MIR -22 240 177 1888 96 8 0 chr5 182052384 182052634 -17577516 + AluSq SINE Alu 58 309 -4 232 261 43 11 chr5 182052691 182052783 -17577367 + L1M4 LINE L1 4734 4828 -1318 380 286 94 41 chr5 182052878 182053123 -17577027 + L1M4 LINE L1 4889 5146 -1000 3047 239 79 66 chr5 182053457 182055551 -17574599 - L1M4c LINE L1 -4566 2080 2 1386 194 43 4 chr5 182055580 182055859 -17574291 - AluJo SINE Alu -21 291 2 208 153 69 14 chr5 182055885 182055957 -17574193 + (TATAA)n Simple_repeat Simple_repeat 2 77 0 2071 124 0 0 chr5 182056734 182057040 -17573110 + AluSx SINE Alu 1 306 0 226 286 90 38 chr5 182057281 182057414 -17572736 + L3 LINE CR1 277 416 -1161 315 319 59 6 chr5 182057596 182057765 -17572385 - LTR16C LTR ERVL -75 416 239 27 29 0 0 chr5 182058282 182058316 -17571834 + AT_rich Low_complexity Low_complexity 1 34 0 1435 266 33 53 chr5 182058723 182059310 -17570840 + L2 LINE L2 2726 3298 -15 329 336 43 52 chr5 182059553 182059764 -17570386 - L2 LINE L2 -411 2903 2695 208 350 114 0 chr5 182060029 182060152 -17569998 + L3 LINE CR1 1179 1315 -262 1672 209 82 58 chr5 182060215 182060717 -17569433 - MLT1F LTR MaLR -16 526 13 244 368 18 9 chr5 182060730 182060844 -17569306 + L3 LINE CR1 1391 1505 -72 37 0 0 0 chr5 182061295 182061332 -17568818 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr5 182063373 182063403 -17566747 + AT_rich Low_complexity Low_complexity 1 30 0 243 0 0 0 chr5 182064044 182064071 -17566079 + (ATTG)n Simple_repeat Simple_repeat 4 30 0 2240 84 0 3 chr5 182064071 182064355 -17565795 - AluSq SINE Alu -30 283 1 1041 253 30 48 chr5 182064621 182065059 -17565091 - MLT1C LTR MaLR 0 467 38 273 274 100 90 chr5 182066316 182066545 -17563605 - MLT1J LTR MaLR -67 444 210 2197 87 42 0 chr5 182066545 182066833 -17563317 - AluSx SINE Alu -12 300 1 273 274 100 90 chr5 182066833 182066913 -17563237 - MLT1J LTR MaLR -301 210 132 519 338 6 6 chr5 182068188 182068348 -17561802 + MIR SINE MIR 5 164 -98 473 311 127 38 chr5 182068472 182068701 -17561449 + L2 LINE L2 2684 2891 -422 3996 127 6 9 chr5 182068701 182069338 -17560812 + MER41B LTR ERV1 1 635 0 473 311 127 38 chr5 182069338 182069683 -17560467 + L2 LINE L2 2891 3313 0 234 229 115 62 chr5 182070185 182070281 -17559869 + MIR SINE MIR 162 262 0 1483 143 42 49 chr5 182071176 182071462 -17558688 + AluJo SINE Alu 1 284 -28 1357 217 8 46 chr5 182071530 182071898 -17558252 - MER4D LTR ERV1 0 903 550 1370 150 7 116 chr5 182071969 182072287 -17557863 - MER49 LTR ERV1 -638 285 1 2476 74 0 3 chr5 182073408 182073717 -17556433 - AluY SINE Alu -3 308 1 6076 127 16 11 chr5 182073794 182074826 -17555324 + L1MA3 LINE L1 5268 6305 0 238 295 21 21 chr5 182076709 182076804 -17553346 - MIR SINE MIR -39 223 129 2084 135 3 3 chr5 182077015 182077318 -17552832 - AluSx SINE Alu -9 303 1 328 254 118 0 chr5 182078816 182078926 -17551224 - L2 LINE L2 -241 3072 2950 2350 105 0 6 chr5 182080129 182080442 -17549708 - AluSp SINE Alu -2 311 1 184 318 152 15 chr5 182081314 182081446 -17548704 + L2 LINE L2 3123 3272 0 1714 224 70 51 chr5 182081515 182082009 -17548141 + MER54A LTR ERVL 80 864 -37 2265 104 0 0 chr5 182082009 182082296 -17547854 + AluSc SINE Alu 1 287 -22 1714 224 70 51 chr5 182082296 182082335 -17547815 + MER54A LTR ERVL 864 901 0 213 163 0 0 chr5 182082584 182082633 -17547517 + CT-rich Low_complexity Low_complexity 1 49 0 791 155 36 167 chr5 182082730 182082982 -17547168 + MER20 DNA MER1_type 1 219 0 230 301 21 86 chr5 182082984 182083077 -17547073 + L2 LINE L2 3150 3236 -36 338 103 0 170 chr5 182083077 182083382 -17546768 + (TA)n Simple_repeat Simple_repeat 1 253 0 * 487 135 5 150 chr5 182083283 182083585 -17546565 + (TATATG)n Simple_repeat Simple_repeat 1 258 0 183 277 0 0 chr5 182083612 182083677 -17546473 + (TGGA)n Simple_repeat Simple_repeat 1 65 0 384 22 0 0 chr5 182084505 182084550 -17545600 + (TA)n Simple_repeat Simple_repeat 2 46 0 2250 97 0 3 chr5 182084724 182085023 -17545127 - AluY SINE Alu -13 298 1 708 214 0 19 chr5 182085449 182085603 -17544547 + Tigger7 DNA MER2_type 2 152 -2335 525 257 14 7 chr5 182085619 182085759 -17544391 - MLT1I LTR MaLR -69 340 200 1197 214 104 0 chr5 182085798 182086115 -17544035 - L1MC4 LINE L1 -370 7672 7323 1658 115 4 0 chr5 182086120 182086372 -17543778 - L1PB1 LINE L1 -39 6112 5860 1026 232 47 83 chr5 182086384 182086806 -17543344 - L1MC4 LINE L1 -1167 6875 6469 282 273 121 80 chr5 182087106 182087495 -17542655 - L1M4 LINE L1 -988 5158 4754 790 251 35 0 chr5 182087500 182087671 -17542479 - MER45A DNA AcHobo -1 177 1 1691 206 38 29 chr5 182087850 182088302 -17541848 - MLT1C LTR MaLR -8 459 4 848 198 59 13 chr5 182088405 182088444 -17541706 - L1MA9 LINE L1 -40 6272 6236 1828 163 42 9 chr5 182088444 182088781 -17541369 + MER7A DNA MER2_type 1 346 0 387 0 0 0 chr5 182088782 182088825 -17541325 + (TA)n Simple_repeat Simple_repeat 1 43 0 848 198 59 13 chr5 182088825 182089020 -17541130 - L1MA9 LINE L1 -75 6237 6025 1271 174 74 0 chr5 182089021 182089263 -17540887 - AluJb SINE Alu -52 260 1 363 187 0 0 chr5 182089279 182089354 -17540796 - L1MA9 LINE L1 -377 5935 5861 400 115 0 0 chr5 182089356 182089417 -17540733 + L1MB1 LINE L1 5818 5878 -311 194 375 147 7 chr5 182089782 182089918 -17540232 + MIR SINE MIR 10 164 -98 284 281 0 24 chr5 182090126 182090208 -17539942 + L2 LINE L2 3233 3312 -1 * 529 271 141 66 chr5 182090199 182090375 -17539775 - L2 LINE L2 -75 3238 3077 2332 92 3 25 chr5 182090375 182090691 -17539459 + AluSp SINE Alu 1 309 -4 529 271 141 66 chr5 182090691 182090861 -17539289 - L2 LINE L2 -236 3077 2866 585 244 87 29 chr5 182091036 182091208 -17538942 + MER5A DNA MER1_type 8 189 0 426 263 164 13 chr5 182091214 182091366 -17538784 - MER5A DNA MER1_type 0 189 15 1104 186 103 4 chr5 182091385 182091638 -17538512 - MER58B DNA MER1_type -8 333 56 185 253 60 60 chr5 182091642 182091725 -17538425 + L2 LINE L2 3138 3220 -52 22 0 0 0 chr5 182091825 182091847 -17538303 + AT_rich Low_complexity Low_complexity 1 22 0 904 300 60 22 chr5 182091908 182092275 -17537875 + L3 LINE CR1 1184 1564 -13 1525 117 0 0 chr5 182092275 182092480 -17537670 - AluSc SINE Alu 0 309 105 3016 71 0 33 chr5 182092480 182092933 -17537217 - MER11A LTR ERVK -1 1265 828 3802 90 33 18 chr5 182092933 182093533 -17536617 - MER11A LTR ERVK -657 609 1 830 108 0 0 chr5 182093533 182093644 -17536506 - AluSc SINE Alu -198 111 1 231 314 72 59 chr5 182093680 182093833 -17536317 + L2 LINE L2 2600 2754 -560 295 323 192 50 chr5 182094227 182094586 -17535564 + L2 LINE L2 2807 3216 -97 327 104 0 0 chr5 182094917 182094965 -17535185 + (T)n Simple_repeat Simple_repeat 1 48 0 180 0 0 0 chr5 182095154 182095174 -17534976 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 265 293 184 7 chr5 182096042 182096189 -17533961 + MIR SINE MIR 14 186 -76 30 45 0 0 chr5 182097043 182097087 -17533063 + AT_rich Low_complexity Low_complexity 1 44 0 2038 105 16 53 chr5 182097552 182097875 -17532275 - AluSq SINE Alu -2 311 1 381 43 0 0 chr5 182099477 182099524 -17530626 + (CA)n Simple_repeat Simple_repeat 2 48 0 267 152 0 0 chr5 182099878 182099924 -17530226 + T-rich Low_complexity Low_complexity 1 46 0 240 311 27 0 chr5 182100893 182100967 -17529183 + MER58B DNA MER1_type 1 76 -265 260 222 14 0 chr5 182100981 182101053 -17529097 + GA-rich Low_complexity Low_complexity 3 75 0 383 158 33 20 chr5 182101110 182101210 -17528940 + MER58B DNA MER1_type 106 341 0 257 281 11 0 chr5 182101553 182101642 -17528508 - MER113 DNA MER1_type? -429 92 3 302 227 92 71 chr5 182101746 182101887 -17528263 - L1ME4a LINE L1 -4 6117 5974 262 312 58 29 chr5 182104330 182104468 -17525682 + L2 LINE L2 3170 3311 -2 340 321 18 9 chr5 182104607 182104716 -17525434 - MIR SINE MIR -145 117 8 1119 196 75 49 chr5 182104797 182105160 -17524990 + MLT1A1 LTR MaLR 1 365 0 365 159 75 28 chr5 182105791 182105898 -17524252 + MER103 DNA DNA 3 114 -52 629 318 80 4 chr5 182106994 182107233 -17522917 + MIR SINE MIR 6 262 0 632 214 0 38 chr5 182108149 182108280 -17521870 - L2 LINE L2 0 3313 3188 234 182 61 30 chr5 182108439 182108505 -17521645 - LTR40a LTR ERVL -76 443 376 425 179 145 68 chr5 182108769 182108791 -17521359 + L2 LINE L2 3186 3205 -108 2319 103 0 0 chr5 182108791 182109091 -17521059 + AluY SINE Alu 1 300 -11 425 179 145 68 chr5 182109091 182109185 -17520965 + L2 LINE L2 3205 3311 -2 212 162 0 0 chr5 182109188 182109225 -17520925 + (ATG)n Simple_repeat Simple_repeat 2 38 0 268 301 77 48 chr5 182110134 182110406 -17519744 - MLT1L LTR MaLR -313 302 23 183 346 79 40 chr5 182110586 182110687 -17519463 - MIR SINE MIR -71 137 33 219 69 0 0 chr5 182111282 182111311 -17518839 + (TAAAA)n Simple_repeat Simple_repeat 5 33 0 2372 68 3 14 chr5 182111542 182111857 -17518293 - AluSc SINE Alu 0 309 1 589 286 52 26 chr5 182111861 182112130 -17518020 - L1MC4a LINE L1 -302 5819 5612 374 267 143 19 chr5 182113071 182113232 -17516918 + MER5A DNA MER1_type 8 188 -1 488 235 0 0 chr5 182113302 182113400 -17516750 - MER5A DNA MER1_type -83 106 9 2332 137 74 2 chr5 182113643 182114046 -17516104 - MSTB1 LTR MaLR 0 432 1 6162 211 84 31 chr5 182114046 182115245 -17514905 - MSTB1-int LTR MaLR 0 1651 349 2013 105 0 7 chr5 182115245 182115521 -17514629 + AluSq SINE Alu 1 274 -39 6162 211 84 31 chr5 182115521 182115888 -17514262 - MSTB1-int LTR MaLR -1302 349 3 1677 328 16 49 chr5 182115888 182115956 -17514194 - MSTB1 LTR MaLR -2 430 361 2046 124 41 0 chr5 182115956 182116246 -17513904 + AluSx SINE Alu 1 302 -10 1677 328 16 49 chr5 182116246 182116414 -17513736 - MSTB1 LTR MaLR -71 361 189 1700 89 102 0 chr5 182116414 182116649 -17513501 - AluSg SINE Alu -51 259 1 1677 328 16 49 chr5 182116649 182116856 -17513294 - MSTB1 LTR MaLR -243 189 1 215 178 0 22 chr5 182117960 182117983 -17512167 + (TAA)n Simple_repeat Simple_repeat 2 25 -20 2366 90 0 0 chr5 182117983 182118282 -17511868 + AluSg SINE Alu 1 299 -11 215 178 0 22 chr5 182118282 182118303 -17511847 + (TAA)n Simple_repeat Simple_repeat 25 45 0 574 237 15 0 chr5 182119033 182119168 -17510982 - MER58B DNA MER1_type -2 339 203 189 229 49 66 chr5 182119331 182119392 -17510758 - L2 LINE L2 -9 3263 3204 373 229 267 23 chr5 182119778 182119909 -17510241 - MER5A DNA MER1_type 0 189 27 1796 179 45 13 chr5 182120582 182120961 -17509189 - LTR45B LTR ERV1 -96 393 3 246 342 53 18 chr5 182121198 182121312 -17508838 - MIR SINE MIR -57 151 34 1273 135 98 81 chr5 182121372 182121438 -17508712 - MSTA LTR MaLR -1 427 364 1872 123 98 0 chr5 182121438 182121723 -17508427 - AluSq SINE Alu 0 313 1 1273 135 98 81 chr5 182121723 182122023 -17508127 - MSTA LTR MaLR -64 364 1 189 154 26 13 chr5 182122352 182122430 -17507720 + (TA)n Simple_repeat Simple_repeat 1 79 0 191 328 17 0 chr5 182122669 182122727 -17507423 + L2 LINE L2 3208 3266 -6 3547 166 55 27 chr5 182122812 182123523 -17506627 + MER44D DNA MER2_type 1 603 -2 2830 13 0 0 chr5 182123605 182123916 -17506234 - AluYb8 SINE Alu -7 311 1 587 299 81 5 chr5 182124106 182124303 -17505847 - MIR SINE MIR -49 213 2 786 211 70 19 chr5 182124303 182124516 -17505634 + MER58A DNA MER1_type 1 224 0 25 0 0 0 chr5 182124917 182124942 -17505208 + AT_rich Low_complexity Low_complexity 1 25 0 1128 47 0 0 chr5 182127394 182127521 -17502629 + AluY SINE Alu 1 127 -184 213 419 26 0 chr5 182127772 182127889 -17502261 + L2 LINE L2 3147 3266 -6 565 264 0 0 chr5 182128031 182128171 -17501979 - MER117 DNA MER1_type -28 169 30 1178 153 4 44 chr5 182128523 182128751 -17501399 + MER20 DNA MER1_type 1 219 0 291 28 0 0 chr5 182130359 182130395 -17499755 + (CA)n Simple_repeat Simple_repeat 1 36 0 2448 83 6 3 chr5 182130442 182130754 -17499396 - AluSq SINE Alu 0 313 1 24 53 0 0 chr5 182131615 182131653 -17498497 + AT_rich Low_complexity Low_complexity 1 38 0 225 394 7 7 chr5 182132277 182132414 -17497736 - MER5A DNA MER1_type -49 140 4 262 295 152 76 chr5 182133160 182133397 -17496753 - L2 LINE L2 -86 3186 2932 2539 37 0 3 chr5 182134456 182134754 -17495396 - AluY SINE Alu -14 297 1 1660 234 21 26 chr5 182134905 182135522 -17494628 - MLT2F LTR ERVL -4 659 1 228 303 40 30 chr5 182136130 182136229 -17493921 + L2 LINE L2 3173 3272 0 2353 71 0 0 chr5 182136361 182136643 -17493507 + AluSc SINE Alu 1 282 -27 343 292 141 50 chr5 182137285 182137689 -17492461 + L1MEd LINE L1 636 1076 -5043 275 250 195 52 chr5 182137722 182138068 -17492082 + HAL1 LINE L1 1218 1626 -881 2036 125 3 26 chr5 182138068 182138373 -17491777 + AluSx SINE Alu 1 298 -14 275 250 195 52 chr5 182138373 182138410 -17491740 + HAL1 LINE L1 1626 1656 -851 2167 95 14 3 chr5 182138929 182139409 -17490741 - AluY SINE Alu 0 485 3 413 133 0 0 chr5 182139411 182139471 -17490679 - MER5A DNA MER1_type -115 74 15 509 273 118 41 chr5 182139541 182139761 -17490389 - MIR SINE MIR -25 237 1 1208 298 136 44 chr5 182140027 182140059 -17490091 + L1M4 LINE L1 3865 3893 -2253 2255 103 3 10 chr5 182140059 182140359 -17489791 + AluSx SINE Alu 1 298 -14 1208 298 136 44 chr5 182140359 182140784 -17489366 + L1M4 LINE L1 3893 4278 -1868 1864 140 99 3 chr5 182140784 182141126 -17489024 + THE1C LTR MaLR 1 375 0 1208 298 136 44 chr5 182141126 182141884 -17488266 + L1M4 LINE L1 4278 5192 -954 300 271 39 0 chr5 182141892 182142021 -17488129 + L1P LINE L1 5209 5342 -804 244 248 0 50 chr5 182142165 182142266 -17487884 + (TA)n Simple_repeat Simple_repeat 1 96 0 1520 171 93 4 chr5 182142473 182142753 -17487397 + AluJb SINE Alu 1 305 -7 719 149 14 111 chr5 182142930 182143138 -17487012 + MER53 DNA DNA 2 189 0 1762 152 38 7 chr5 182144065 182144355 -17485795 - AluJo SINE Alu -13 299 1 2435 95 0 9 chr5 182144427 182144742 -17485408 - AluSx SINE Alu 0 312 1 198 0 0 0 chr5 182144894 182144916 -17485234 + (A)n Simple_repeat Simple_repeat 1 22 0 6671 76 93 4 chr5 182145352 182146369 -17483781 - L1PA10 LINE L1 -10 6158 5112 2176 105 0 10 chr5 182146496 182146791 -17483359 - AluSq SINE Alu -21 292 1 186 314 70 12 chr5 182146929 182147015 -17483135 - L2 LINE L2 -93 3220 3130 1244 190 12 73 chr5 182147171 182147342 -17482808 - MER58B DNA MER1_type -2079 341 198 2002 108 25 3 chr5 182147342 182147628 -17482522 + AluSg1 SINE Alu 1 292 -17 1244 190 12 73 chr5 182147628 182147783 -17482367 - MER58B DNA MER1_type -2222 198 35 317 146 0 0 chr5 182147781 182147829 -17482321 - Alu SINE Alu -253 48 1 * 211 217 43 0 chr5 182147882 182147928 -17482222 - MER5A DNA MER1_type -77 112 65 281 231 227 37 chr5 182148168 182148341 -17481809 + L1ME4a LINE L1 5768 5907 -214 2347 104 0 0 chr5 182148341 182148650 -17481500 - AluY SINE Alu -2 309 1 13562 130 40 21 chr5 182148650 182150189 -17479961 + Tigger1 DNA MER2_type 2 1510 -908 2332 86 7 0 chr5 182150189 182150491 -17479659 + AluSp SINE Alu 1 304 -9 13562 130 40 21 chr5 182150491 182150745 -17479405 + Tigger1 DNA MER2_type 1510 1758 -660 2192 113 0 31 chr5 182150745 182151063 -17479087 + AluSg SINE Alu 1 308 -2 13562 130 40 21 chr5 182151063 182151639 -17478511 + Tigger1 DNA MER2_type 1758 2418 0 281 231 227 37 chr5 182151639 182151759 -17478391 + L1ME4a LINE L1 5906 6118 -3 2339 74 0 19 chr5 182151856 182152166 -17477984 + AluY SINE Alu 1 304 -7 2197 103 3 0 chr5 182152177 182152468 -17477682 + AluSq SINE Alu 1 292 -21 458 117 0 45 chr5 182152626 182152737 -17477413 + (TTTC)n Simple_repeat Simple_repeat 4 109 0 1792 165 4 0 chr5 182152749 182153021 -17477129 - AluJb SINE Alu -39 273 1 1387 176 15 112 chr5 182153338 182153690 -17476460 + AluJo SINE Alu 1 312 0 2046 115 10 3 chr5 182153794 182154082 -17476068 + AluSx SINE Alu 5 294 -18 283 308 105 14 chr5 182154098 182154241 -17475909 - L3 LINE CR1 -132 1445 1290 267 288 74 45 chr5 182154359 182154449 -17475701 - MIR3 SINE MIR -46 216 130 2327 105 0 0 chr5 182154449 182154744 -17475406 + AluSc SINE Alu 5 299 -10 267 288 74 45 chr5 182154744 182154861 -17475289 - MIR3 SINE MIR -132 130 6 364 269 44 77 chr5 182156016 182156198 -17473952 + MLT1K LTR MaLR 2 177 -411 305 193 35 0 chr5 182156400 182156457 -17473693 + LTR67 LTR ERVL 497 555 -2 2194 114 3 0 chr5 182156901 182157200 -17472950 - AluSp SINE Alu -13 300 1 421 219 21 0 chr5 182157244 182157350 -17472800 + L1MB3 LINE L1 5700 5807 -375 797 210 28 6 chr5 182157351 182157532 -17472618 + L1MB3 LINE L1 5990 6174 -9 21 0 0 0 chr5 182157838 182157859 -17472291 + AT_rich Low_complexity Low_complexity 1 21 0 728 276 12 62 chr5 182158056 182158299 -17471851 - MIR SINE MIR 0 262 32 2056 129 0 0 chr5 182158418 182158755 -17471395 + AluSc SINE Alu 1 337 0 325 213 27 27 chr5 182158909 182158984 -17471166 + L2 LINE L2 3196 3270 -2 303 225 190 0 chr5 182159355 182159474 -17470676 + MIR SINE MIR 48 199 -63 216 333 61 23 chr5 182159588 182159720 -17470430 - MIR3 SINE MIR -3 205 69 2165 98 39 3 chr5 182159745 182160031 -17470119 - AluSq SINE Alu -14 299 4 366 278 150 64 chr5 182160032 182160266 -17469884 - MIR SINE MIR -2 260 7 1946 253 102 17 chr5 182162742 182163750 -17466400 - L1MDb LINE L1 -4571 1835 773 330 242 26 26 chr5 182165042 182165195 -17464955 - L1MDa LINE L1 -5110 1430 1278 550 338 65 0 chr5 182166144 182166345 -17463805 - MIR SINE MIR -2 260 47 1747 189 0 11 chr5 182166660 182166972 -17463178 - AluJo SINE Alu 0 309 1 23 0 0 0 chr5 182167029 182167052 -17463098 + AT_rich Low_complexity Low_complexity 1 23 0 7314 36 6 14 chr5 182167052 182168469 -17461681 - L1PA4 LINE L1 0 6155 4752 856 217 38 116 chr5 182168516 182168831 -17461319 - MLT1A1 LTR MaLR 0 365 85 1865 107 0 104 chr5 182168831 182169188 -17460962 + AluSx SINE Alu 1 324 0 856 217 38 116 chr5 182169188 182169267 -17460883 - MLT1A1 LTR MaLR -280 85 1 242 485 0 0 chr5 182169322 182169454 -17460696 + L2 LINE L2 3141 3272 0 2448 242 67 113 chr5 182169638 182171442 -17458708 + Charlie7 DNA MER1_type 212 1915 -697 781 153 0 0 chr5 182171442 182171560 -17458590 - FLAM_C SINE Alu -15 118 1 2448 242 67 113 chr5 182171560 182171787 -17458363 + Charlie7 DNA MER1_type 1915 2151 -461 261 0 0 0 chr5 182171926 182171955 -17458195 + (ATG)n Simple_repeat Simple_repeat 2 30 0 1848 158 0 26 chr5 182172223 182172534 -17457616 - AluSx SINE Alu -3 309 7 197 230 230 60 chr5 182172731 182172831 -17457319 + MIR SINE MIR 33 149 -113 24 0 0 0 chr5 182172908 182172932 -17457218 + AT_rich Low_complexity Low_complexity 1 24 0 1731 190 0 13 chr5 182173221 182173526 -17456624 + AluJo SINE Alu 2 302 -10 278 192 0 14 chr5 182173950 182174023 -17456127 + GA-rich Low_complexity Low_complexity 2 73 0 1372 194 3 51 chr5 182225127 182225421 -17404729 + AluJo SINE Alu 1 280 -32 243 0 0 0 chr5 182225431 182225458 -17404692 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1058 271 96 38 chr5 182225495 182225994 -17404156 - MLT1F LTR MaLR -5 537 10 261 310 11 0 chr5 182226005 182226092 -17404058 - MIR3 SINE MIR -40 168 81 597 182 10 0 chr5 182226215 182226314 -17403836 - Tigger7 DNA MER2_type 0 2491 2392 * 661 270 154 9 chr5 182226311 182226461 -17403689 - Tigger7 DNA MER2_type -2220 267 140 1872 166 0 0 chr5 182226461 182226767 -17403383 - AluSx SINE Alu 0 306 1 661 270 154 9 chr5 182226767 182226848 -17403302 - Tigger7 DNA MER2_type -2347 140 1 21 0 0 0 chr5 182226902 182226923 -17403227 + AT_rich Low_complexity Low_complexity 1 21 0 2039 106 3 34 chr5 182227768 182228088 -17402062 - AluSg SINE Alu 0 310 1 21 36 0 0 chr5 182229166 182229194 -17400956 + AT_rich Low_complexity Low_complexity 1 28 0 295 308 30 68 chr5 182229225 182229358 -17400792 + MIR SINE MIR 49 176 -86 1563 223 73 96 chr5 182229376 182229951 -17400199 - MLT1F1 LTR MaLR -3 564 3 269 250 114 29 chr5 182229957 182230097 -17400053 - MLT1F1-int LTR MaLR -6 1365 1214 268 313 15 111 chr5 182230225 182230423 -17399727 - MLT1F1-int LTR MaLR -238 1133 955 245 360 117 0 chr5 182230525 182230636 -17399514 - MLT1F1-int LTR MaLR -492 879 756 24 0 0 0 chr5 182230682 182230706 -17399444 + AT_rich Low_complexity Low_complexity 1 24 0 5278 89 17 3 chr5 182230706 182231411 -17398739 - L1MA1 LINE L1 0 6302 5588 468 246 46 23 chr5 182231694 182231824 -17398326 - MLT1F1-int LTR MaLR -770 601 469 1958 126 19 35 chr5 182231825 182232142 -17398008 + AluSq SINE Alu 1 312 -1 1013 192 133 98 chr5 182232171 182232488 -17397662 - MLT1F1 LTR MaLR -236 331 4 1430 190 66 81 chr5 182232499 182232893 -17397257 + MLT1B LTR MaLR 3 390 0 219 322 103 27 chr5 182233133 182233279 -17396871 - MIR SINE MIR -49 213 57 724 196 90 87 chr5 182233689 182234134 -17396016 - MLT1H LTR MaLR 0 549 29 255 260 227 18 chr5 182234200 182234388 -17395762 + MIR SINE MIR 16 246 -16 21 36 0 0 chr5 182235241 182235269 -17394881 + AT_rich Low_complexity Low_complexity 1 28 0 196 337 53 30 chr5 182235586 182235755 -17394395 - L2 LINE L2 -992 2322 2150 1049 123 0 47 chr5 182235947 182235983 -17394167 - AluSg/x SINE Alu 0 312 276 225 65 0 0 chr5 182235983 182236014 -17394136 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1049 123 0 47 chr5 182236014 182236148 -17394002 - AluSg/x SINE Alu -36 276 150 242 29 29 0 chr5 182236161 182236196 -17393954 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 2192 108 0 0 chr5 182236198 182236484 -17393666 - AluSc SINE Alu -23 286 1 222 37 0 0 chr5 182236766 182236793 -17393357 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1919 127 0 34 chr5 182236795 182237087 -17393063 - AluSx SINE Alu -30 282 1 2257 98 3 3 chr5 182237467 182237762 -17392388 - AluSc SINE Alu -14 295 1 309 211 0 0 chr5 182238086 182238138 -17392012 + 5S rRNA rRNA 2 53 -68 295 206 99 84 chr5 182238910 182239041 -17391109 - MIR SINE MIR -108 154 22 596 328 72 8 chr5 182239653 182239915 -17390235 + L2 LINE L2 3030 3308 -5 1932 135 25 0 chr5 182239972 182240254 -17389896 - AluSx SINE Alu -9 303 15 1854 107 4 0 chr5 182240699 182240982 -17389168 + AluSc SINE Alu 36 319 0 24 0 0 0 chr5 182241828 182241852 -17388298 + AT_rich Low_complexity Low_complexity 1 24 0 4652 111 93 136 chr5 182241897 182243347 -17386803 - pTR5 LTR ERV1 0 2438 382 625 238 67 21 chr5 182243500 182243693 -17386457 + MIR SINE MIR 4 205 -57 272 304 14 14 chr5 182243746 182243815 -17386335 + L2 LINE L2 3194 3262 -10 2341 88 0 25 chr5 182243816 182244135 -17386015 + AluY SINE Alu 1 311 0 2165 106 0 0 chr5 182244321 182244633 -17385517 + AluSx SINE Alu 1 312 0 539 264 86 54 chr5 182244633 182244948 -17385202 - Charlie8 DNA MER1_type -2006 411 87 21 0 0 0 chr5 182245331 182245352 -17384798 + AT_rich Low_complexity Low_complexity 1 21 0 186 290 43 0 chr5 182245777 182245846 -17384304 - L2 LINE L2 -67 3246 3175 304 146 78 29 chr5 182245875 182245978 -17384172 + (TATAG)n Simple_repeat Simple_repeat 3 110 0 325 234 63 27 chr5 182246058 182246169 -17383981 + MIR SINE MIR 128 242 -20 2257 116 0 0 chr5 182246306 182246600 -17383550 + AluSc SINE Alu 1 294 -15 845 225 34 64 chr5 182246743 182246803 -17383347 - L1ME3 LINE L1 -5 6157 6097 2466 81 0 3 chr5 182246803 182247110 -17383040 - AluSg SINE Alu -4 306 1 845 225 34 64 chr5 182247110 182247347 -17382803 - L1ME3 LINE L1 -65 6097 5869 642 214 62 111 chr5 182247375 182247526 -17382624 - L1ME3 LINE L1 -625 5539 5382 2411 96 0 3 chr5 182247526 182247838 -17382312 - AluY SINE Alu 0 311 1 642 214 62 111 chr5 182247838 182248080 -17382070 - L1ME3 LINE L1 -782 5382 5139 830 196 0 22 chr5 182248082 182248220 -17381930 - FRAM SINE Alu -25 151 17 1485 176 43 43 chr5 182248265 182248471 -17381679 + AluSx SINE Alu 1 209 -103 2212 120 0 3 chr5 182248471 182248771 -17381379 + AluSg SINE Alu 1 299 -11 1485 176 43 43 chr5 182248771 182248866 -17381284 + AluSx SINE Alu 208 302 -10 2163 151 10 72 chr5 182249622 182250038 -17380112 - MLT1B LTR MaLR 0 390 1 2315 86 0 19 chr5 182250095 182250409 -17379741 + AluSc SINE Alu 1 308 -1 2111 53 0 11 chr5 182250816 182251080 -17379070 - AluY SINE Alu -50 261 1 936 247 87 39 chr5 182251550 182252011 -17378139 - L1ME4a LINE L1 -3 6118 5636 453 297 43 128 chr5 182252479 182252988 -17377162 + L2 LINE L2 2807 3272 0 321 305 28 21 chr5 182253489 182253630 -17376520 - MER103 DNA DNA -15 151 10 2281 88 3 19 chr5 182253906 182254214 -17375936 - AluSp SINE Alu -10 303 1 442 263 196 0 chr5 182254877 182255056 -17375094 + MIR SINE MIR 49 262 0 1464 141 20 138 chr5 182255549 182255897 -17374253 - AluYb8 SINE Alu -1 307 1 408 292 48 12 chr5 182256099 182256267 -17373883 + MIR SINE MIR 11 184 -78 341 304 94 0 chr5 182256948 182257086 -17373064 + MIR SINE MIR 48 198 -64 2317 108 0 0 chr5 182257181 182257486 -17372664 + AluSg1 SINE Alu 1 305 -4 268 352 49 19 chr5 182257636 182257798 -17372352 + MIR SINE MIR 21 187 -75 2049 106 4 4 chr5 182259096 182259371 -17370779 + AluSx SINE Alu 1 275 -37 183 296 19 0 chr5 182259381 182259435 -17370715 + MIR SINE MIR 146 200 -62 2118 114 0 3 chr5 182259485 182259800 -17370350 + AluSc SINE Alu 1 309 0 669 330 112 39 chr5 182259802 182260265 -17369885 - MLT1K LTR MaLR -69 519 23 2381 87 0 0 chr5 182261584 182261884 -17368266 + AluSx SINE Alu 1 300 -12 882 282 65 12 chr5 182261923 182262246 -17367904 + MER58B DNA MER1_type 1 340 -1 1419 214 54 0 chr5 182262806 182263163 -17366987 - AluJo SINE Alu 0 373 1 2211 97 3 0 chr5 182263421 182263731 -17366419 + AluY SINE Alu 1 311 0 272 310 0 0 chr5 182264710 182264781 -17365369 + MER58A DNA MER1_type 1 71 -36 1991 143 3 0 chr5 182264791 182265078 -17365072 - AluSx SINE Alu -24 288 1 359 330 6 0 chr5 182265105 182265307 -17364843 + L1ME LINE L1 5328 5527 -639 180 0 0 0 chr5 182265384 182265404 -17364746 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1569 186 0 38 chr5 182265404 182265695 -17364455 - AluJb SINE Alu -32 280 1 2511 60 13 0 chr5 182266105 182266406 -17363744 - AluY SINE Alu -6 305 1 213 211 0 0 chr5 182268055 182268107 -17362043 + GA-rich Low_complexity Low_complexity 4 55 0 251 355 0 21 chr5 182268133 182268226 -17361924 + MIR SINE MIR 1 91 -171 479 212 74 138 chr5 182268236 182268473 -17361677 - MIR SINE MIR -6 256 36 2528 61 0 0 chr5 182268473 182268768 -17361382 - AluY SINE Alu -14 297 3 479 212 74 138 chr5 182268768 182268799 -17361351 - MIR SINE MIR -226 36 5 257 323 43 0 chr5 182268830 182268923 -17361227 + MIR SINE MIR 96 192 -70 348 377 15 0 chr5 182269922 182270052 -17360098 - L2 LINE L2 0 3272 3141 711 174 123 0 chr5 182270144 182270278 -17359872 - MLT1B LTR MaLR 0 390 240 475 216 149 28 chr5 182270278 182270459 -17359691 - Charlie1b DNA MER1_type -2 521 319 1439 203 40 20 chr5 182270588 182270888 -17359262 - Charlie1b DNA MER1_type -217 306 1 185 0 0 39 chr5 182270907 182270933 -17359217 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 304 111 0 0 chr5 182271213 182271258 -17358892 - MER58B DNA MER1_type 0 341 297 3058 167 13 6 chr5 182271263 182271796 -17358354 + MER44D DNA MER2_type 2 593 -12 1383 210 24 17 chr5 182271803 182272094 -17358056 - MER58B DNA MER1_type -40 301 9 378 311 110 31 chr5 182272097 182272325 -17357825 + MIR SINE MIR 15 260 -2 278 311 29 29 chr5 182272461 182272564 -17357586 + MIR3 SINE MIR 73 175 -33 225 94 0 0 chr5 182272861 182272893 -17357257 + (CATTT)n Simple_repeat Simple_repeat 1 32 0 515 269 231 4 chr5 182273247 182273507 -17356643 - L2 LINE L2 -16 3297 2979 203 250 0 0 chr5 182273507 182273551 -17356599 + (ATGGTG)n Simple_repeat Simple_repeat 3 46 0 501 330 28 0 chr5 182273560 182273736 -17356414 - MIR SINE MIR -33 229 49 2372 67 0 0 chr5 182274854 182275152 -17354998 + AluY SINE Alu 7 304 -7 458 312 105 10 chr5 182275253 182275452 -17354698 - MIR SINE MIR -7 255 37 407 228 96 7 chr5 182275514 182275650 -17354500 + MER103 DNA DNA 9 156 -10 2086 138 0 3 chr5 182275787 182276232 -17353918 + AluSg SINE Alu 1 444 0 263 28 28 0 chr5 182277432 182277468 -17352682 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 1999 98 0 7 chr5 182277468 182277743 -17352407 - AluSc SINE Alu -32 277 5 23 68 0 0 chr5 182277856 182277900 -17352250 + AT_rich Low_complexity Low_complexity 1 44 0 2282 93 7 0 chr5 182278090 182278390 -17351760 + AluY SINE Alu 1 302 -9 1750 233 18 42 chr5 182279002 182279496 -17350654 - MLT1D LTR MaLR -1 504 23 308 234 0 0 chr5 182279620 182279684 -17350466 + MIR SINE MIR 175 238 -24 333 344 25 0 chr5 182279927 182280049 -17350101 - L2 LINE L2 0 3313 3189 1717 203 76 49 chr5 182280145 182280632 -17349518 + MLT1D LTR MaLR 2 501 -4 2078 72 7 4 chr5 182281211 182281487 -17348663 + L1PA8A LINE L1 5824 6100 -31 219 45 91 0 chr5 182281487 182281531 -17348619 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 1594 119 4 0 chr5 182285247 182285473 -17344677 - AluSg/x SINE Alu -8 302 76 22 56 0 0 chr5 182285860 182285896 -17344254 + AT_rich Low_complexity Low_complexity 1 36 0 1244 232 123 20 chr5 182286243 182286601 -17343549 + MSTD LTR MaLR 1 395 -1 253 289 67 39 chr5 182286719 182286823 -17343327 - L3 LINE CR1 -17 1560 1454 222 331 73 13 chr5 182286859 182287010 -17343140 - L3 LINE CR1 -287 1290 1131 1680 181 0 4 chr5 182287023 182287327 -17342823 - AluJb SINE Alu 0 305 3 387 0 0 0 chr5 182287407 182287450 -17342700 + (CA)n Simple_repeat Simple_repeat 2 44 0 904 319 99 14 chr5 182287556 182287970 -17342180 - L3 LINE CR1 -464 1113 665 322 324 99 16 chr5 182288069 182288251 -17341899 + MLT1K LTR MaLR 11 207 -381 401 258 56 76 chr5 182288393 182288591 -17341559 + MLT1K LTR MaLR 393 586 -2 2187 108 0 10 chr5 182288669 182288966 -17341184 - AluSx SINE Alu -14 298 5 340 347 85 25 chr5 182288970 182289169 -17340981 - L3 LINE CR1 -1120 457 247 1982 80 49 59 chr5 182291086 182291419 -17338731 + AluSx SINE Alu 1 330 0 247 280 53 114 chr5 182291534 182291571 -17338579 + MIR3 SINE MIR 4 42 -166 1612 194 40 0 chr5 182291571 182291895 -17338255 - MER58B DNA MER1_type -3 338 2 247 280 53 114 chr5 182291895 182291989 -17338161 + MIR3 SINE MIR 42 127 -81 219 69 0 0 chr5 182292002 182292031 -17338119 + (TG)n Simple_repeat Simple_repeat 1 29 0 279 140 0 0 chr5 182292031 182292081 -17338069 + (GA)n Simple_repeat Simple_repeat 2 51 0 185 188 0 83 chr5 182292288 182292336 -17337814 + L2 LINE L2 1559 1602 -1712 1750 138 69 0 chr5 182292451 182292742 -17337408 - AluY SINE Alu 0 311 1 393 271 21 0 chr5 182292746 182292842 -17337308 + MIR SINE MIR 127 224 -38 2029 120 21 7 chr5 182292874 182293165 -17336985 + AluSx SINE Alu 1 295 -17 210 105 0 0 chr5 182294335 182294373 -17335777 + (T)n Simple_repeat Simple_repeat 1 38 0 294 328 61 0 chr5 182295856 182295987 -17334163 + MIR SINE MIR 49 187 -75 256 335 97 27 chr5 182296892 182297077 -17333073 - MIR SINE MIR -14 248 51 231 88 0 0 chr5 182298058 182298092 -17332058 + (TG)n Simple_repeat Simple_repeat 2 35 0 605 284 52 64 chr5 182298320 182298570 -17331580 - MIR SINE MIR -6 256 10 256 293 12 12 chr5 182299337 182299419 -17330731 + GA-rich Low_complexity Low_complexity 3 84 0 2178 101 7 3 chr5 182300507 182300805 -17329345 - AluSq SINE Alu -14 299 1 600 272 108 14 chr5 182301230 182301443 -17328707 + MIR SINE MIR 30 262 0 494 341 99 5 chr5 182301865 182302076 -17328074 + MIR SINE MIR 8 238 -24 2428 86 0 0 chr5 182302212 182302516 -17327634 - AluSg SINE Alu -2 308 5 632 82 69 9 chr5 182303727 182303966 -17326184 + (TA)n Simple_repeat Simple_repeat 1 253 0 834 245 45 95 chr5 182303976 182304223 -17325927 - L1ME1 LINE L1 -64 6102 5887 509 15 0 0 chr5 182304223 182304289 -17325861 - L1PA2 LINE L1 0 6155 6090 834 245 45 95 chr5 182304289 182304503 -17325647 - L1ME1 LINE L1 -279 5887 5664 352 355 11 49 chr5 182304676 182304884 -17325266 - MIR3 SINE MIR -56 206 9 224 307 44 51 chr5 182304895 182305032 -17325118 - L2 LINE L2 -1 3312 3177 2225 128 0 3 chr5 182305253 182305566 -17324584 + AluSx SINE Alu 1 312 0 212 293 63 83 chr5 182305700 182305905 -17324245 - L2 LINE L2 -536 2778 2578 751 330 149 16 chr5 182306836 182307521 -17322629 + L2 LINE L2 1951 2726 -588 213 121 0 0 chr5 182307794 182307827 -17322323 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 1840 148 23 7 chr5 182307828 182308131 -17322019 - AluSx SINE Alu -4 308 1 278 247 99 0 chr5 182309455 182309536 -17320614 - MIR SINE MIR 0 262 174 2477 162 25 70 chr5 182310366 182310976 -17319174 - L1 LINE L1 -1350 4796 4215 * 3100 162 41 6 chr5 182310974 182311256 -17318894 + L1M2 LINE L1 4761 5032 -1151 1745 54 0 18 chr5 182311256 182311478 -17318672 + AluY SINE Alu 1 218 -93 3100 162 41 6 chr5 182311478 182311853 -17318297 + L1M2 LINE L1 5032 5440 -743 2446 74 3 0 chr5 182311878 182312187 -17317963 + AluY SINE Alu 1 310 -1 844 289 79 28 chr5 182312581 182313015 -17317135 - L2 LINE L2 -105 3208 2740 217 277 191 21 chr5 182313253 182313347 -17316803 - L2 LINE L2 -38 3275 3166 2110 120 10 0 chr5 182313390 182313690 -17316460 + AluSx SINE Alu 1 303 -9 2186 112 0 0 chr5 182313703 182313998 -17316152 + AluSx SINE Alu 11 305 -7 238 286 0 0 chr5 182314051 182314107 -17316043 + L2 LINE L2 3237 3292 -21 252 389 81 42 chr5 182314692 182314975 -17315175 + L2 LINE L2 2959 3252 -20 183 80 0 0 chr5 182314982 182315007 -17315143 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr5 182316121 182316142 -17314008 + AT_rich Low_complexity Low_complexity 1 21 0 213 254 16 16 chr5 182316783 182316846 -17313304 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 317 287 98 24 chr5 182318173 182318337 -17311813 - MIR SINE MIR -86 176 1 531 302 33 14 chr5 182318373 182318585 -17311565 - MIR SINE MIR -37 225 10 1985 102 0 67 chr5 182319604 182319917 -17310233 + AluSc SINE Alu 1 292 -17 195 42 0 0 chr5 182320672 182320696 -17309454 + (TG)n Simple_repeat Simple_repeat 1 24 0 2048 125 3 3 chr5 182321272 182321561 -17308589 - AluSg SINE Alu -21 289 1 312 309 43 0 chr5 182321620 182321714 -17308436 - MIR SINE MIR -71 191 94 369 291 63 16 chr5 182321788 182321915 -17308235 + L2 LINE L2 3174 3306 -7 217 271 0 0 chr5 182321887 182321935 -17308215 - L2 LINE L2 -3 3310 3263 * 1961 288 54 42 chr5 182321993 182322588 -17307562 - L2 LINE L2 -176 3137 2525 2163 87 31 3 chr5 182322588 182322875 -17307275 + AluSc SINE Alu 1 295 -14 1961 288 54 42 chr5 182322875 182323238 -17306912 - L2 LINE L2 -788 2525 2168 265 272 9 61 chr5 182323416 182323530 -17306620 - LTR67 LTR ERVL -54 503 396 2200 104 0 36 chr5 182323664 182323971 -17306179 - AluSc SINE Alu -13 296 1 333 259 14 129 chr5 182324033 182324087 -17306063 - MIR SINE MIR -67 195 136 1572 194 3 31 chr5 182324087 182324381 -17305769 - AluJb SINE Alu -26 286 1 333 259 14 129 chr5 182324381 182324473 -17305677 - MIR SINE MIR -126 136 66 2021 64 71 4 chr5 182324613 182324933 -17305217 + AluY SINE Alu 1 338 0 2354 95 0 0 chr5 182326107 182326413 -17303737 - AluY SINE Alu -5 306 1 22 35 0 0 chr5 182326425 182326454 -17303696 + AT_rich Low_complexity Low_complexity 1 29 0 304 301 38 87 chr5 182326517 182326646 -17303504 + MIR SINE MIR 21 140 -122 2206 120 0 0 chr5 182326646 182326946 -17303204 + AluSc SINE Alu 1 300 -9 304 301 38 87 chr5 182326946 182326999 -17303151 + MIR SINE MIR 140 194 -68 2089 194 10 15 chr5 182326999 182327391 -17302759 - MLT1B LTR MaLR 0 390 1 186 43 0 0 chr5 182327485 182327508 -17302642 + (T)n Simple_repeat Simple_repeat 1 23 0 433 123 0 0 chr5 182328006 182328071 -17302079 - Alu SINE Alu -2 308 244 339 125 0 0 chr5 182328365 182328413 -17301737 + Alu SINE Alu 245 292 -10 307 243 26 79 chr5 182328915 182329067 -17301083 - L1ME4a LINE L1 -26 6095 5952 362 235 27 115 chr5 182329129 182329237 -17300913 - MIR SINE MIR -33 229 142 2242 121 0 9 chr5 182329237 182329552 -17300598 + AluSx SINE Alu 1 312 0 362 235 27 115 chr5 182329552 182329626 -17300524 - MIR SINE MIR -120 142 63 213 200 0 0 chr5 182329685 182329725 -17300425 + (TG)n Simple_repeat Simple_repeat 1 40 0 2406 99 0 0 chr5 182329892 182330196 -17299954 + AluSx SINE Alu 1 304 -8 572 276 59 0 chr5 182330233 182330385 -17299765 - MIR SINE MIR -24 238 78 2300 100 7 0 chr5 182331012 182331322 -17298828 - AluSx SINE Alu 0 312 1 322 264 95 74 chr5 182332256 182332404 -17297746 + MIR3 SINE MIR 31 181 -27 756 176 163 90 chr5 182332470 182332771 -17297379 - MER33 DNA MER1_type 0 324 2 342 0 0 0 chr5 182332875 182332913 -17297237 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1872 148 0 4 chr5 182332916 182333193 -17296957 - AluSx SINE Alu -31 281 6 339 25 0 0 chr5 182333195 182333235 -17296915 + (A)n Simple_repeat Simple_repeat 1 40 0 846 167 0 0 chr5 182333527 182333653 -17296497 + FLAM_C SINE Alu 2 127 -6 683 106 38 8 chr5 182333653 182333785 -17296365 + GA-rich Low_complexity Low_complexity 1 136 0 2679 49 0 0 chr5 182333810 182334114 -17296036 + AluY SINE Alu 1 304 -7 189 94 0 0 chr5 182334608 182334640 -17295510 + (TTTTTA)n Simple_repeat Simple_repeat 3 34 0 1617 166 31 7 chr5 182334671 182334961 -17295189 - AluSx SINE Alu -15 297 1 642 194 97 111 chr5 182336211 182336384 -17293766 + MER20 DNA MER1_type 1 173 -46 1968 107 4 4 chr5 182336384 182336670 -17293480 + AluSc SINE Alu 17 302 0 642 194 97 111 chr5 182336670 182336712 -17293438 + MER20 DNA MER1_type 173 214 -5 224 167 21 0 chr5 182337123 182337171 -17292979 + CT-rich Low_complexity Low_complexity 3 51 0 189 366 14 14 chr5 182337608 182337679 -17292471 + L2 LINE L2 2999 3069 -203 2068 113 13 3 chr5 182337726 182338028 -17292122 + AluY SINE Alu 2 306 -5 4405 122 304 96 chr5 182338082 182339484 -17290666 + pTR5 LTR ERV1 741 2433 -5 1979 201 87 2 chr5 182340954 182341347 -17288803 - MSTB LTR MaLR 0 426 1 2118 122 0 20 chr5 182341434 182341738 -17288412 + AluSx SINE Alu 1 298 -14 4827 124 48 89 chr5 182341918 182342936 -17287214 - pTR5 LTR ERV1 0 2438 1315 2424 112 21 5 chr5 182343090 182343474 -17286676 + pTR5 LTR ERV1 3 392 -2046 774 277 171 60 chr5 182343589 182344127 -17286023 + MLT1L LTR MaLR 4 601 -14 23 0 0 0 chr5 182344317 182344340 -17285810 + AT_rich Low_complexity Low_complexity 1 23 0 324 264 142 7 chr5 182344455 182344603 -17285547 + L1ME LINE L1 5669 5836 -285 984 148 38 29 chr5 182344606 182344816 -17285334 - L1MC3 LINE L1 0 7785 7574 2792 115 6 16 chr5 182344816 182345312 -17284838 + MER4B-int LTR ERV1 6225 6758 0 3579 128 60 47 chr5 182345312 182345510 -17284640 + MER4B LTR ERV1 1 195 -415 2018 129 23 10 chr5 182345510 182345812 -17284338 + AluSx SINE Alu 7 312 0 3579 128 60 47 chr5 182345812 182346215 -17283935 + MER4B LTR ERV1 195 610 0 4788 205 20 37 chr5 182346217 182347342 -17282808 - L1MC3 LINE L1 -808 6977 5872 654 212 57 40 chr5 182347338 182347364 -17282786 - L1M2 LINE L1 -4241 2186 2162 * 2023 141 3 6 chr5 182347364 182347676 -17282474 + AluSq SINE Alu 1 311 -2 654 212 57 40 chr5 182347676 182347878 -17282272 - L1M2 LINE L1 -4265 2162 1742 3770 227 50 59 chr5 182348124 182349382 -17280768 + L1MCb LINE L1 30 1276 -5288 1798 176 0 0 chr5 182349382 182349671 -17280479 + AluJb SINE Alu 1 289 -23 3770 227 50 59 chr5 182349671 182350113 -17280037 + L1MCb LINE L1 1276 1720 -4844 2232 99 0 0 chr5 182350114 182350431 -17279719 - AluY SINE Alu 0 317 1 1900 132 17 3 chr5 182350431 182350719 -17279431 - AluSx SINE Alu -20 292 1 1999 127 21 0 chr5 182350721 182350885 -17279265 - AluSx SINE Alu -15 297 123 324 0 0 0 chr5 182350885 182350921 -17279229 + (TG)n Simple_repeat Simple_repeat 2 37 0 1999 127 21 0 chr5 182350921 182351047 -17279103 - AluSx SINE Alu -189 123 1 2170 109 0 0 chr5 182351061 182351346 -17278804 - AluSx SINE Alu -27 285 1 213 200 0 0 chr5 182351513 182351553 -17278597 + (CA)n Simple_repeat Simple_repeat 1 40 0 2093 128 7 10 chr5 182351686 182351992 -17278158 - AluSx SINE Alu 0 312 8 28 0 0 0 chr5 182355273 182355301 -17274849 + AT_rich Low_complexity Low_complexity 1 28 0 429 110 0 0 chr5 182356519 182356592 -17273558 + (CTG)n Simple_repeat Simple_repeat 2 74 0 408 111 0 0 chr5 182356713 182356761 -17273389 + (CA)n Simple_repeat Simple_repeat 1 111 0 408 111 0 0 chr5 182356761 182356824 -17273326 + (CA)n Simple_repeat Simple_repeat 2 64 0 262 266 64 11 chr5 182358061 182358155 -17271995 - MIR SINE MIR -75 187 89 273 313 102 0 chr5 182358314 182358442 -17271708 - L2 LINE L2 0 3313 3173 260 291 38 130 chr5 182358481 182358742 -17271408 + L2 LINE L2 2955 3191 -81 252 0 0 0 chr5 182358767 182358795 -17271355 + (CA)n Simple_repeat Simple_repeat 1 28 0 558 281 17 17 chr5 182358814 182358992 -17271158 - MIR SINE MIR -84 178 1 460 206 224 2 chr5 182360624 182360808 -17269342 - Charlie8 DNA MER1_type -2188 229 58 285 241 12 60 chr5 182361897 182361980 -17268170 - MIR3 SINE MIR -54 154 76 249 296 19 74 chr5 182362323 182362431 -17267719 - MIR3 SINE MIR -45 163 62 230 324 54 9 chr5 182362509 182362620 -17267530 + MIR SINE MIR 47 162 -100 335 309 15 29 chr5 182362621 182362757 -17267393 + MIR SINE MIR 129 262 0 267 242 171 19 chr5 182363697 182363908 -17266242 - L1ME4a LINE L1 -6 6115 5873 271 231 82 129 chr5 182364537 182364591 -17265559 + MIR SINE MIR 98 153 -109 2308 113 7 0 chr5 182364591 182364900 -17265250 + AluSx SINE Alu 1 311 -1 271 231 82 129 chr5 182364900 182364992 -17265158 + MIR SINE MIR 153 237 -25 300 298 40 58 chr5 182365093 182365290 -17264860 + MIR SINE MIR 12 208 -54 283 323 71 20 chr5 182365571 182365670 -17264480 - L2 LINE L2 -5 3308 3205 2294 109 6 6 chr5 182366143 182366455 -17263695 - AluSx SINE Alu 0 312 1 2119 113 0 29 chr5 182368898 182369208 -17260942 - AluSx SINE Alu -11 301 1 382 299 209 6 chr5 182369280 182369457 -17260693 + MIR SINE MIR 35 247 -15 529 258 187 36 chr5 182370210 182370416 -17259734 + L2 LINE L2 2720 2894 -419 2480 84 3 0 chr5 182370416 182370725 -17259425 - AluSg SINE Alu 0 310 1 529 258 187 36 chr5 182370725 182370905 -17259245 + L2 LINE L2 2894 3155 -158 345 212 94 0 chr5 182370970 182371055 -17259095 - MER63 DNA MER1_type -91 745 27 314 308 39 23 chr5 182371065 182371195 -17258955 + L2 LINE L2 3144 3275 -38 219 172 47 78 chr5 182371300 182371364 -17258786 - L2 LINE L2 -6 3307 3246 1133 146 0 0 chr5 182371365 182371536 -17258614 - AluSg/x SINE Alu -5 307 137 675 255 18 126 chr5 182371548 182371944 -17258206 - L2 LINE L2 -74 3239 2887 232 234 31 16 chr5 182371966 182372030 -17258120 + AluS SINE Alu 1 65 -238 1822 131 16 49 chr5 182372694 182373000 -17257150 - AluSx SINE Alu -16 296 1 342 0 0 0 chr5 182373077 182373115 -17257035 + (TG)n Simple_repeat Simple_repeat 1 38 0 1868 222 29 45 chr5 182373115 182373664 -17256486 - L1MA10 LINE L1 -20 6314 5773 1668 138 42 31 chr5 182373667 182374022 -17256128 + L1MA10 LINE L1 5395 5753 -559 1013 301 63 29 chr5 182374048 182374341 -17255809 + L2 LINE L2 2678 2960 -353 2169 90 13 17 chr5 182374341 182374640 -17255510 - AluSg SINE Alu -10 300 3 1013 301 63 29 chr5 182374640 182374693 -17255457 + L2 LINE L2 2960 3010 -303 2260 81 0 19 chr5 182374693 182375037 -17255113 - AluY SINE Alu 0 311 1 1013 301 63 29 chr5 182375037 182375229 -17254921 + L2 LINE L2 3010 3313 0 287 288 119 34 chr5 182375246 182375757 -17254393 + L1ME LINE L1 5298 5796 -374 2167 125 7 0 chr5 182375814 182376111 -17254039 - AluSx SINE Alu -13 299 1 28 29 0 0 chr5 182376377 182376412 -17253738 + AT_rich Low_complexity Low_complexity 1 35 0 1858 113 26 43 chr5 182376680 182376982 -17253168 + AluY SINE Alu 1 297 -14 1173 215 0 0 chr5 182378245 182378468 -17251682 + MER58A DNA MER1_type 1 223 -1 213 39 0 0 chr5 182378884 182378910 -17251240 + (TTAGGG)n Simple_repeat Simple_repeat 4 29 0 365 281 106 12 chr5 182379125 182379285 -17250865 - MIR SINE MIR -15 247 73 504 86 0 0 chr5 182379370 182379440 -17250710 + (TA)n Simple_repeat Simple_repeat 2 71 0 2333 73 0 10 chr5 182379488 182379790 -17250360 + AluSx SINE Alu 1 299 -13 618 293 73 49 chr5 182380680 182381486 -17248664 + L1ME3 LINE L1 730 1604 -4702 2283 118 0 0 chr5 182381486 182381790 -17248360 + AluSq SINE Alu 1 304 -9 618 293 73 49 chr5 182381790 182381921 -17248229 + L1ME3 LINE L1 1604 1730 -4576 1991 110 0 69 chr5 182382063 182382380 -17247770 + AluSx SINE Alu 1 295 -17 215 301 0 0 chr5 182382512 182382585 -17247565 + A-rich Low_complexity Low_complexity 1 73 0 1189 272 120 31 chr5 182382686 182383869 -17246281 + L1ME3 LINE L1 2203 3490 -2639 2169 95 0 3 chr5 182383869 182384175 -17245975 + AluSc SINE Alu 1 305 0 486 275 154 14 chr5 182384237 182384673 -17245477 + L1ME3 LINE L1 3995 4491 -1638 595 282 56 43 chr5 182384723 182384992 -17245158 + L1ME3 LINE L1 4628 4905 -1224 2146 112 7 3 chr5 182384992 182385295 -17244855 + AluSg SINE Alu 1 304 -6 595 282 56 43 chr5 182385295 182385401 -17244749 + L1ME3 LINE L1 4905 5008 -1121 963 244 59 83 chr5 182385539 182385900 -17244250 + L1ME3 LINE L1 5237 5605 -540 232 167 183 0 chr5 182385900 182385960 -17244190 + MER116 DNA Mariner 3 73 -7 963 244 59 83 chr5 182385960 182386432 -17243718 + L1ME3 LINE L1 5605 6098 -47 821 280 104 40 chr5 182386646 182387000 -17243150 - L2 LINE L2 -1 3312 2936 1731 178 125 13 chr5 182387556 182388005 -17242145 + L1MB8 LINE L1 5667 6165 -13 1064 185 4 48 chr5 182390240 182390467 -17239683 - MER20 DNA MER1_type -2 217 1 3497 196 36 26 chr5 182392977 182394534 -17235616 + L1MB8 LINE L1 4354 5922 -256 24 0 0 0 chr5 182394727 182394751 -17235399 + AT_rich Low_complexity Low_complexity 1 24 0 2536 204 30 17 chr5 182394858 182395501 -17234649 + L1MB8 LINE L1 5272 5922 -256 25 0 0 0 chr5 182395503 182395528 -17234622 + AT_rich Low_complexity Low_complexity 1 25 0 357 82 0 0 chr5 182395606 182395655 -17234495 + (TA)n Simple_repeat Simple_repeat 2 50 0 255 208 52 21 chr5 182395949 182396045 -17234105 - L2 LINE L2 -137 3176 3078 394 363 139 8 chr5 182396191 182396458 -17233692 - L2 LINE L2 -469 2845 2544 555 297 24 57 chr5 182397399 182397645 -17232505 - MIR SINE MIR 0 262 25 801 186 23 17 chr5 182397828 182398005 -17232145 - MER5B DNA MER1_type 0 178 1 381 252 29 19 chr5 182398152 182398255 -17231895 + MER5A DNA MER1_type 9 112 -77 209 358 67 28 chr5 182398417 182398596 -17231554 - L2 LINE L2 -492 2822 2637 2327 98 10 0 chr5 182399586 182399891 -17230259 - AluSq SINE Alu -5 308 1 284 273 23 23 chr5 182402145 182402233 -17227917 - MIR SINE MIR -120 142 55 335 60 20 0 chr5 182402749 182402799 -17227351 + (GA)n Simple_repeat Simple_repeat 1 51 0 27 0 0 0 chr5 182402799 182402826 -17227324 + GC_rich Low_complexity Low_complexity 1 27 0 552 270 74 23 chr5 182402854 182403069 -17227081 - MIR SINE MIR -17 245 20 25 0 0 0 chr5 182403087 182403112 -17227038 + AT_rich Low_complexity Low_complexity 1 25 0 259 269 21 21 chr5 182403438 182403531 -17226619 + CT-rich Low_complexity Low_complexity 1 93 0 384 332 24 29 chr5 182403542 182403747 -17226403 + MIR SINE MIR 59 262 0 186 133 0 0 chr5 182404263 182404293 -17225857 + (T)n Simple_repeat Simple_repeat 1 30 0 240 347 33 82 chr5 182404840 182405085 -17225065 - L2 LINE L2 -39 3233 3001 24 0 0 0 chr5 182405646 182405670 -17224480 + AT_rich Low_complexity Low_complexity 1 24 0 36800 27 18 2 chr5 182405670 182411704 -17218446 - L1HS LINE L1 0 6155 4 2430 80 0 3 chr5 182411864 182412175 -17217975 + AluY SINE Alu 1 310 -1 1536 176 42 20 chr5 182412205 182412558 -17217592 - MER46B DNA MER2_type 0 236 1 403 303 109 29 chr5 182413380 182413555 -17216595 + MIR SINE MIR 26 214 -48 248 280 56 47 chr5 182414594 182414701 -17215449 + MIR SINE MIR 25 132 -130 349 203 47 0 chr5 182414844 182414908 -17215242 + MIR SINE MIR 34 100 -162 498 46 0 0 chr5 182414908 182414973 -17215177 + (TG)n Simple_repeat Simple_repeat 2 66 0 196 315 117 0 chr5 182415096 182415207 -17214943 + MIR SINE MIR 120 243 -19 2035 117 3 0 chr5 182415228 182415510 -17214640 + AluSx SINE Alu 6 288 -24 558 281 17 17 chr5 182415650 182415828 -17214322 + MIR SINE MIR 1 178 -84 342 0 0 0 chr5 182415847 182415885 -17214265 + (TG)n Simple_repeat Simple_repeat 1 38 0 247 287 50 142 chr5 182415910 182416171 -17213979 - L2 LINE L2 -81 3191 2955 273 313 102 0 chr5 182416210 182416338 -17213812 + L2 LINE L2 3173 3313 0 262 266 64 11 chr5 182416497 182416591 -17213559 + MIR SINE MIR 89 187 -75 408 111 0 0 chr5 182417808 182417828 -17212322 + (TG)n Simple_repeat Simple_repeat 1 83 0 408 111 0 0 chr5 182417828 182417891 -17212259 + (TG)n Simple_repeat Simple_repeat 2 64 0 483 101 0 0 chr5 182418060 182418139 -17212011 + (CAG)n Simple_repeat Simple_repeat 2 80 0 28 0 0 0 chr5 182419358 182419386 -17210764 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 182424508 182424539 -17205611 + AT_rich Low_complexity Low_complexity 1 31 0 204 152 0 43 chr5 182424971 182425017 -17205133 + (AGGTG)n Simple_repeat Simple_repeat 1 44 0 288 0 0 0 chr5 182426307 182426339 -17203811 + (TG)n Simple_repeat Simple_repeat 2 33 0 1746 130 6 93 chr5 182427962 182428139 -17202011 - AluSx SINE Alu -16 296 158 2118 112 41 3 chr5 182428139 182428433 -17201717 - AluSc SINE Alu -4 305 1 1746 130 6 93 chr5 182428433 182428579 -17201571 - AluSx SINE Alu -154 158 1 239 158 0 18 chr5 182429876 182429933 -17200217 + GA-rich Low_complexity Low_complexity 3 58 0 202 196 0 71 chr5 182433985 182434041 -17196109 + L2 LINE L2 3261 3312 -1 22 0 0 0 chr5 182434089 182434111 -17196039 + AT_rich Low_complexity Low_complexity 1 22 0 2436 75 0 7 chr5 182434120 182434428 -17195722 - AluY SINE Alu -5 306 1 2159 58 4 0 chr5 182434472 182434730 -17195420 + AluSx SINE Alu 52 310 -2 37 39 0 0 chr5 182434854 182434905 -17195245 + AT_rich Low_complexity Low_complexity 1 51 0 2420 73 0 6 chr5 182434949 182435262 -17194888 + AluY SINE Alu 1 311 0 495 266 36 21 chr5 182435281 182435473 -17194677 + MER58B DNA MER1_type 143 337 -4 421 255 87 58 chr5 182436171 182436379 -17193771 - MIR SINE MIR -44 218 5 601 354 35 26 chr5 182436935 182437303 -17192847 - L2 LINE L2 -220 3052 2676 809 239 114 49 chr5 182437351 182437878 -17192272 + L1MC5 LINE L1 7323 7883 -78 245 118 20 0 chr5 182437878 182437929 -17192221 + (TTATA)n Simple_repeat Simple_repeat 2 53 0 514 343 91 18 chr5 182437968 182438254 -17191896 - L2 LINE L2 -604 2710 2404 315 348 171 26 chr5 182438323 182439102 -17191048 - L2 LINE L2 -624 2690 1799 198 143 0 0 chr5 182439898 182439933 -17190217 + (ATTG)n Simple_repeat Simple_repeat 2 36 0 223 320 93 10 chr5 182441023 182441120 -17189030 - MIR3 SINE MIR -7 201 97 375 187 13 0 chr5 182441238 182441313 -17188837 + AluSg/x SINE Alu 216 291 -9 724 213 0 0 chr5 182441412 182441553 -17188597 + FLAM_C SINE Alu 3 143 0 502 188 0 0 chr5 182441579 182441659 -17188491 + FRAM SINE Alu 66 145 -31 196 73 0 49 chr5 182441662 182441703 -17188447 + (TAA)n Simple_repeat Simple_repeat 2 40 0 25 0 0 0 chr5 182441829 182441854 -17188296 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 182443940 182443962 -17186188 + AT_rich Low_complexity Low_complexity 1 22 0 2294 116 0 0 chr5 182444543 182444845 -17185305 - AluSg SINE Alu -6 304 3 239 252 37 74 chr5 182445325 182445460 -17184690 - HAL1b LINE L1 -31 1317 1188 2314 95 3 16 chr5 182445541 182445858 -17184292 - AluSp SINE Alu 0 313 1 504 254 90 0 chr5 182446845 182447034 -17183116 + LTR16C LTR ERVL 286 491 0 273 307 31 62 chr5 182447143 182447365 -17182785 - L1ME LINE L1 -454 5667 5451 2394 87 0 3 chr5 182448987 182449285 -17180865 + AluSp SINE Alu 1 297 -16 265 303 55 55 chr5 182449749 182449914 -17180236 - MIR SINE MIR -4 258 94 614 318 54 37 chr5 182451158 182451507 -17178643 - L2 LINE L2 -9 3304 2950 655 268 55 12 chr5 182451510 182451674 -17178476 + MER91A DNA MER1_type 1 171 -25 183 42 0 0 chr5 182451724 182451748 -17178402 + (TG)n Simple_repeat Simple_repeat 2 25 0 21 57 0 0 chr5 182451748 182451783 -17178367 + AT_rich Low_complexity Low_complexity 1 35 0 484 344 48 44 chr5 182451793 182452043 -17178107 - L2 LINE L2 -379 2935 2685 1529 107 5 9 chr5 182452398 182452614 -17177536 + AluSg/x SINE Alu 89 303 -9 191 129 0 0 chr5 182453978 182454009 -17176141 + L2 LINE L2 3268 3298 -15 2370 77 0 40 chr5 182454859 182455183 -17174967 + AluY SINE Alu 1 311 0 817 129 0 39 chr5 182455444 182455599 -17174551 + L1MB1 LINE L1 5760 5908 -260 283 317 40 10 chr5 182455859 182455960 -17174190 - MLT1L LTR MaLR -409 206 103 230 204 167 0 chr5 182456222 182456276 -17173874 + MIR SINE MIR 82 144 -64 667 220 75 23 chr5 182456286 182456459 -17173691 - MER58A DNA MER1_type -42 182 1 266 240 30 70 chr5 182457740 182457840 -17172310 + MIR SINE MIR 117 212 -50 222 37 0 0 chr5 182458039 182458066 -17172084 + (TCCA)n Simple_repeat Simple_repeat 3 29 0 2256 114 3 0 chr5 182458348 182458656 -17171494 - AluSx SINE Alu -3 309 1 199 282 24 47 chr5 182459188 182459273 -17170877 - MIR3 SINE MIR -1 207 125 184 342 76 13 chr5 182459420 182459499 -17170651 + MIR3 SINE MIR 96 179 -29 1744 154 44 3 chr5 182459748 182460046 -17170104 + AluSx SINE Alu 1 310 -2 764 289 47 17 chr5 182460643 182460878 -17169272 + MIR SINE MIR 21 262 0 789 212 5 11 chr5 182461255 182461444 -17168706 - MER53 DNA DNA -1 188 1 529 204 90 114 chr5 182461475 182461730 -17168420 + Charlie8 DNA MER1_type 79 1414 -1003 793 316 95 19 chr5 182463191 182463665 -17166485 - L2 LINE L2 0 3313 2804 447 268 150 7 chr5 182463817 182463970 -17166180 - MER5B DNA MER1_type -3 175 1 1609 169 70 0 chr5 182463980 182464335 -17165815 - Charlie5 DNA MER1_type 0 2622 2243 557 192 17 17 chr5 182464344 182464464 -17165686 - Charlie5 DNA MER1_type -2487 125 6 214 344 172 7 chr5 182464576 182464727 -17165423 + MIR SINE MIR 57 232 -30 565 294 22 55 chr5 182465041 182465316 -17164834 + Charlie8 DNA MER1_type 9 274 -2143 217 386 0 30 chr5 182466164 182466296 -17163854 - MIR3 SINE MIR -39 169 42 254 281 149 37 chr5 182466519 182466682 -17163468 - L1ME4a LINE L1 -2 6119 5976 2021 122 34 3 chr5 182466682 182466977 -17163173 + AluSx SINE Alu 1 304 -8 254 281 149 37 chr5 182466977 182467297 -17162853 - L1ME4a LINE L1 -145 5976 5582 218 209 26 43 chr5 182467490 182467605 -17162545 + (TA)n Simple_repeat Simple_repeat 1 113 0 306 349 0 34 chr5 182467713 182467859 -17162291 + MIR3 SINE MIR 58 198 -10 332 288 83 8 chr5 182468441 182468573 -17161577 + MIR SINE MIR 57 198 -64 235 276 0 26 chr5 182469227 182469303 -17160847 + Charlie8 DNA MER1_type 135 208 -2209 242 318 34 11 chr5 182469846 182469934 -17160216 - MER5A DNA MER1_type -22 167 78 2258 93 3 0 chr5 182470459 182470749 -17159401 - AluSp SINE Alu -22 291 1 2712 20 0 0 chr5 182473234 182473535 -17156615 + AluYa5 SINE Alu 1 301 -10 523 309 109 57 chr5 182474449 182474616 -17155534 - L2 LINE L2 0 3313 3156 2059 125 0 10 chr5 182474616 182474919 -17155231 - AluSx SINE Alu -12 300 1 523 309 109 57 chr5 182474919 182475226 -17154924 - L2 LINE L2 -157 3156 2814 711 324 86 32 chr5 182477811 182478216 -17151934 + L3 LINE CR1 1127 1553 -24 365 216 69 10 chr5 182478972 182479074 -17151076 + L2 LINE L2 1670 1777 -1537 21 57 0 0 chr5 182479585 182479620 -17150530 + AT_rich Low_complexity Low_complexity 1 35 0 429 289 63 31 chr5 182481770 182481929 -17148221 - MIR3 SINE MIR -23 185 22 293 335 130 63 chr5 182482057 182482609 -17147541 - L2 LINE L2 -10 3262 2749 2349 44 7 40 chr5 182482609 182482905 -17147245 + AluSc SINE Alu 1 286 -23 483 18 0 0 chr5 182482906 182482962 -17147188 + (GGAA)n Simple_repeat Simple_repeat 4 59 0 293 335 130 63 chr5 182482962 182483854 -17146296 - L2 LINE L2 -522 2750 1724 478 301 62 43 chr5 182484082 182484291 -17145859 + MIR SINE MIR 48 260 -2 2499 63 3 3 chr5 182485569 182485900 -17144250 - L1PA8 LINE L1 -6 6166 5836 215 341 83 15 chr5 182487611 182487743 -17142407 + L3b LINE CR1 1429 1569 -14 1830 158 19 22 chr5 182489015 182489337 -17140813 + MER1B DNA MER1_type 2 322 -17 5568 202 21 15 chr5 182540645 182542974 -17087176 - L1MC1 LINE L1 -16 6597 4120 807 183 32 18 chr5 182542972 182543218 -17086932 - L1MC1 LINE L1 -4597 1829 1494 * 564 139 5 43 chr5 182543231 182543418 -17086732 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 35 0 0 chr5 182543549 182543578 -17086572 + AT_rich Low_complexity Low_complexity 1 29 0 714 134 11 11 chr5 182543578 182543757 -17086393 + (TA)n Simple_repeat Simple_repeat 2 180 0 6471 183 25 69 chr5 182543796 182545308 -17084842 - L1MC1 LINE L1 -4960 1466 21 1461 206 25 53 chr5 182545569 182545890 -17084260 + AluJo SINE Alu 1 312 0 341 290 11 0 chr5 182545950 182546043 -17084107 + MER119 DNA MER1_type 4 97 -486 734 180 8 0 chr5 182546065 182546193 -17083957 + MER119 DNA MER1_type 455 583 0 2183 99 10 0 chr5 182546801 182547095 -17083055 - AluSq SINE Alu -16 297 1 21 57 0 0 chr5 182547137 182547172 -17082978 + AT_rich Low_complexity Low_complexity 1 35 0 982 166 117 35 chr5 182547391 182547463 -17082687 - MER33 DNA MER1_type -2271 314 249 2170 126 0 0 chr5 182547463 182547765 -17082385 + AluSg SINE Alu 1 302 -8 982 166 117 35 chr5 182547765 182547982 -17082168 - MER33 DNA MER1_type -2336 249 1 367 353 32 13 chr5 182547986 182548142 -17082008 + MER5A DNA MER1_type 26 184 -5 338 115 16 0 chr5 182548184 182548245 -17081905 + (CA)n Simple_repeat Simple_repeat 2 63 0 22 0 0 0 chr5 182548342 182548364 -17081786 + AT_rich Low_complexity Low_complexity 1 22 0 484 276 135 47 chr5 182549673 182549970 -17080180 - L2 LINE L2 0 3313 2991 322 343 78 0 chr5 182550482 182550584 -17079566 - MER5B DNA MER1_type -31 147 38 22 35 0 0 chr5 182552033 182552062 -17078088 + AT_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr5 182552154 182552189 -17077961 + AT_rich Low_complexity Low_complexity 1 35 0 1879 46 0 4 chr5 182553480 182553717 -17076433 - L1PA5 LINE L1 -5 6149 5914 251 308 0 113 chr5 182555388 182555452 -17074698 + L2 LINE L2 3196 3239 -74 1187 218 32 9 chr5 182555452 182555768 -17074382 - MER33 DNA MER1_type -1 323 1 251 308 0 113 chr5 182555768 182555836 -17074314 + L2 LINE L2 3239 3313 0 269 277 11 11 chr5 182556743 182556837 -17073313 + HAL1b LINE L1 1191 1284 -64 2215 68 0 40 chr5 182557202 182557523 -17072627 - AluY SINE Alu 0 309 1 489 308 75 48 chr5 182557647 182557874 -17072276 - MIR SINE MIR -26 236 4 25 31 0 0 chr5 182557935 182557967 -17072183 + AT_rich Low_complexity Low_complexity 1 32 0 189 254 0 34 chr5 182558125 182558184 -17071966 - MIR SINE MIR -87 121 65 227 326 65 11 chr5 182558831 182558923 -17071227 - MIR SINE MIR -116 146 50 347 259 34 41 chr5 182559638 182559785 -17070365 - MIR SINE MIR -11 251 106 239 274 27 14 chr5 182561611 182561684 -17068466 + MIR SINE MIR 161 234 -28 1912 132 59 7 chr5 182563985 182564272 -17065878 - AluSx SINE Alu -10 302 1 250 323 40 20 chr5 182564542 182564641 -17065509 - MIR SINE MIR -134 128 28 34 24 0 0 chr5 182565197 182565238 -17064912 + AT_rich Low_complexity Low_complexity 1 41 0 2042 114 11 0 chr5 182565348 182565670 -17064480 + AluSp SINE Alu 1 325 0 2529 209 61 15 chr5 182565733 182566341 -17063809 + MER82 DNA MER2_type 4 639 -14 183 167 0 0 chr5 182566347 182566389 -17063761 + CT-rich Low_complexity Low_complexity 2 43 0 281 142 67 17 chr5 182566392 182566472 -17063678 + (TA)n Simple_repeat Simple_repeat 1 90 -36 2213 105 3 0 chr5 182566472 182566757 -17063393 - AluSp SINE Alu -27 286 1 281 142 67 17 chr5 182566757 182566796 -17063354 + (TA)n Simple_repeat Simple_repeat 90 126 0 273 128 0 0 chr5 182567758 182567805 -17062345 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 317 304 58 14 chr5 182567806 182567944 -17062206 + L1ME4a LINE L1 5715 5858 -263 263 267 44 37 chr5 182568026 182568161 -17061989 + L1ME4a LINE L1 5967 6102 -19 205 286 0 0 chr5 182568800 182568842 -17061308 - L2 LINE L2 -21 3292 3251 197 317 122 12 chr5 182569071 182569153 -17060997 - MIR SINE MIR -100 108 18 284 269 19 29 chr5 182569186 182569290 -17060860 + MIR SINE MIR 150 252 -10 1980 138 10 10 chr5 182569402 182569729 -17060421 - AluSx SINE Alu 0 312 1 416 275 100 25 chr5 182569731 182570051 -17060099 - MER113 DNA MER1_type? -96 425 82 387 316 29 22 chr5 182570439 182570578 -17059572 + L2 LINE L2 3133 3272 0 360 0 0 0 chr5 182571472 182571512 -17058638 + (TA)n Simple_repeat Simple_repeat 1 40 0 228 227 0 0 chr5 182571571 182571615 -17058535 + (CAA)n Simple_repeat Simple_repeat 1 44 0 505 287 15 0 chr5 182572613 182572749 -17057401 - MIR SINE MIR -7 255 118 260 211 19 0 chr5 182572846 182572898 -17057252 - MIR SINE MIR -164 98 46 453 294 65 22 chr5 182574014 182574063 -17056087 - MER5B DNA MER1_type 0 178 133 438 20 0 0 chr5 182574063 182574114 -17056036 + (CA)n Simple_repeat Simple_repeat 2 52 0 453 294 65 22 chr5 182574114 182574220 -17055930 - MER5B DNA MER1_type -45 133 27 489 317 35 89 chr5 182574259 182574773 -17055377 + L2 LINE L2 2825 3310 -3 2208 129 0 0 chr5 182574938 182575232 -17054918 - AluSg SINE Alu -16 294 1 2212 113 0 6 chr5 182575492 182575803 -17054347 + AluSq SINE Alu 4 312 -1 435 320 51 11 chr5 182575943 182576121 -17054029 - MIR SINE MIR -74 188 4 21 0 0 0 chr5 182577254 182577275 -17052875 + AT_rich Low_complexity Low_complexity 1 21 0 1208 230 17 7 chr5 182579217 182579513 -17050637 + MER58B DNA MER1_type 2 300 -41 634 311 64 8 chr5 182579663 182579898 -17050252 - MIR SINE MIR -10 252 5 257 271 187 9 chr5 182580508 182580615 -17049535 - LTR67 LTR ERVL 0 557 432 779 228 128 31 chr5 182581308 182581648 -17048502 - L1MB7 LINE L1 0 6184 5805 367 312 48 16 chr5 182582038 182582163 -17047987 - L2 LINE L2 0 3272 3144 242 314 226 29 chr5 182582195 182582603 -17047547 - L2 LINE L2 -8 3305 2818 21 0 0 0 chr5 182582773 182582794 -17047356 + AT_rich Low_complexity Low_complexity 1 21 0 469 197 28 20 chr5 182582798 182582909 -17047241 - L1ME3 LINE L1 -25 6137 6033 2427 92 0 7 chr5 182582909 182583215 -17046935 - AluSq SINE Alu -8 305 2 469 197 28 20 chr5 182583215 182583245 -17046905 - L1ME3 LINE L1 -129 6033 6005 807 109 49 60 chr5 182583259 182583442 -17046708 - L1MA7 LINE L1 0 6291 6111 364 261 26 17 chr5 182586018 182586133 -17044017 + MER5A DNA MER1_type 35 150 -39 657 285 53 10 chr5 182586203 182586410 -17043740 + MIR SINE MIR 17 232 -30 2245 82 4 0 chr5 182586537 182586856 -17043294 + AluSp SINE Alu 1 320 0 738 223 247 31 chr5 182588561 182588958 -17041192 + MLT1G1 LTR MaLR 9 449 -141 542 122 10 0 chr5 182588959 182589057 -17041093 + (TA)n Simple_repeat Simple_repeat 1 99 0 2181 115 0 0 chr5 182589067 182589353 -17040797 + AluSx SINE Alu 11 296 -16 374 257 183 0 chr5 182589477 182589640 -17040510 - MIR SINE MIR -12 250 58 2005 124 0 3 chr5 182589758 182590073 -17040077 - AluSx SINE Alu 0 314 1 181 380 0 0 chr5 182590203 182590274 -17039876 - MIR SINE MIR -119 143 73 204 125 0 0 chr5 182590997 182591029 -17039121 + (CA)n Simple_repeat Simple_repeat 2 33 0 372 342 71 50 chr5 182591052 182591374 -17038776 + L2 LINE L2 2939 3267 -5 2507 0 0 0 chr5 182592720 182592992 -17037158 + AluYa5 SINE Alu 1 272 -39 243 231 0 0 chr5 182593266 182593318 -17036832 + MIR SINE MIR 178 229 -33 341 350 74 18 chr5 182593654 182593937 -17036213 - L2 LINE L2 -466 2848 2550 337 128 49 39 chr5 182594102 182594134 -17036016 + GA-rich Low_complexity Low_complexity 2 32 -72 1958 106 10 55 chr5 182594134 182594446 -17035704 + AluSq SINE Alu 1 298 -15 337 128 49 39 chr5 182594446 182594515 -17035635 + GA-rich Low_complexity Low_complexity 32 104 0 294 271 195 8 chr5 182594887 182595005 -17035145 - MIR SINE MIR -108 154 15 2329 102 0 0 chr5 182595292 182595597 -17034553 - AluSx SINE Alu -7 305 1 206 305 172 33 chr5 182595656 182595807 -17034343 - MIR SINE MIR -35 227 56 24 32 0 0 chr5 182596386 182596417 -17033733 + AT_rich Low_complexity Low_complexity 1 31 0 1908 157 0 7 chr5 182600543 182600830 -17029320 + AluJb SINE Alu 15 299 -13 243 303 30 0 chr5 182601373 182601472 -17028678 - L1ME4a LINE L1 -198 5923 5822 452 309 126 17 chr5 182603000 182603230 -17026920 + MIR SINE MIR 2 256 -6 1467 280 77 2 chr5 182603255 182603684 -17026466 - LTR16B LTR ERVL -3 461 1 222 282 13 39 chr5 182604251 182604329 -17025821 + L2 LINE L2 3232 3307 -6 2466 78 0 0 chr5 182604391 182604700 -17025450 + AluY SINE Alu 1 309 -2 847 217 37 42 chr5 182604858 182605075 -17025075 - MER20 DNA MER1_type 0 219 4 184 322 17 0 chr5 182606203 182606262 -17023888 + MIR SINE MIR 43 102 -160 189 298 96 11 chr5 182606362 182606456 -17023694 + MIR SINE MIR 131 232 -30 1035 217 58 66 chr5 182606637 182607001 -17023149 - MLT1A1 LTR MaLR -4 361 1 359 308 51 0 chr5 182608014 182608170 -17021980 + MER117 DNA MER1_type 15 178 -19 792 322 65 31 chr5 182608406 182608822 -17021328 - L2 LINE L2 -78 3235 2806 286 221 39 87 chr5 182609207 182609311 -17020839 - MIR SINE MIR -68 194 96 1846 122 0 89 chr5 182610038 182610374 -17019776 + AluSx SINE Alu 1 306 -6 354 235 59 42 chr5 182611134 182611253 -17018897 + MIR3 SINE MIR 82 202 -6 185 359 0 39 chr5 182611614 182611692 -17018458 - L2 LINE L2 -2 3270 3196 187 254 28 28 chr5 182611753 182611824 -17018326 + MIR SINE MIR 186 256 -6 27 49 0 0 chr5 182611835 182611876 -17018274 + AT_rich Low_complexity Low_complexity 1 41 0 463 272 177 20 chr5 182612035 182612182 -17017968 + MER5A DNA MER1_type 13 182 -7 235 182 18 18 chr5 182612643 182612698 -17017452 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 313 318 104 17 chr5 182612757 182612930 -17017220 - MIR SINE MIR -9 253 66 186 133 0 0 chr5 182614651 182614681 -17015469 + (A)n Simple_repeat Simple_repeat 1 30 0 335 338 7 7 chr5 182615088 182615227 -17014923 + MIR SINE MIR 84 222 -40 185 318 18 55 chr5 182615261 182615371 -17014779 + L2 LINE L2 2766 2871 -443 678 213 138 12 chr5 182615394 182615554 -17014596 - MER5A DNA MER1_type -7 182 3 263 344 64 0 chr5 182616113 182616238 -17013912 + L2 LINE L2 3127 3259 -13 409 267 209 21 chr5 182616550 182616737 -17013413 + MIR SINE MIR 27 248 -14 639 247 46 11 chr5 182617361 182617535 -17012615 - MIR SINE MIR -1 261 82 216 0 0 0 chr5 182617911 182617935 -17012215 + (T)n Simple_repeat Simple_repeat 1 24 0 191 36 36 0 chr5 182618821 182618849 -17011301 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2354 92 0 0 chr5 182618851 182619143 -17011007 - AluSg SINE Alu -18 292 1 237 241 0 0 chr5 182619237 182619291 -17010859 - L1ME3 LINE L1 -52 6110 6057 224 375 0 0 chr5 182620147 182620243 -17009907 + GA-rich Low_complexity Low_complexity 3 98 0 204 40 0 0 chr5 182620451 182620476 -17009674 + (AATAG)n Simple_repeat Simple_repeat 3 27 0 2058 87 0 64 chr5 182622518 182622829 -17007321 + AluY SINE Alu 1 291 -20 1405 200 47 41 chr5 182623902 182624267 -17005883 - MLT1A2 LTR MaLR 0 374 8 330 306 42 28 chr5 182625465 182625609 -17004541 + MIR SINE MIR 8 153 -109 2349 105 0 6 chr5 182625632 182625946 -17004204 - AluSq SINE Alu -1 312 1 336 349 33 37 chr5 182626946 182627161 -17002989 - MIR SINE MIR -48 214 1 1571 105 50 0 chr5 182627186 182627444 -17002706 - L1MA1 LINE L1 -4 6298 6028 35 0 0 0 chr5 182629485 182629520 -17000630 + AT_rich Low_complexity Low_complexity 1 35 0 2127 109 0 3 chr5 182629590 182629873 -17000277 - AluSg SINE Alu -28 282 1 26 30 0 0 chr5 182631161 182631194 -16998956 + AT_rich Low_complexity Low_complexity 1 33 0 1244 213 131 42 chr5 182631824 182632274 -16997876 - MLT1D LTR MaLR -4 501 12 370 314 95 7 chr5 182632283 182632420 -16997730 + MIR SINE MIR 21 169 -93 225 224 17 0 chr5 182632925 182632983 -16997167 + (TTA)n Simple_repeat Simple_repeat 1 59 0 310 375 8 0 chr5 182634677 182634797 -16995353 - L2 LINE L2 -2 3311 3191 291 240 0 96 chr5 182635788 182635892 -16994258 + L2 LINE L2 3220 3313 0 1248 56 0 0 chr5 182636045 182636206 -16993944 - L1PA4 LINE L1 -3 6152 5992 259 245 170 0 chr5 182636230 182636324 -16993826 + L2 LINE L2 3164 3273 -40 389 321 96 91 chr5 182636540 182636967 -16993183 + L2 LINE L2 2809 3237 -35 197 179 0 18 chr5 182636972 182637028 -16993122 + GA-rich Low_complexity Low_complexity 1 55 0 232 423 52 5 chr5 182687525 182687738 -16942412 + MIR SINE MIR 27 249 -13 199 210 12 12 chr5 182689696 182689777 -16940373 + (CA)n Simple_repeat Simple_repeat 2 82 0 236 268 31 0 chr5 182690695 182690792 -16939358 - L1MDa LINE L1 -872 5668 5569 210 150 0 0 chr5 182690806 182690846 -16939304 + (TA)n Simple_repeat Simple_repeat 2 41 0 2701 258 19 10 chr5 182690882 182691765 -16938385 - L1MDa LINE L1 -1200 5340 4450 3511 244 34 50 chr5 182691779 182692164 -16937986 - L1MDa LINE L1 -2268 4272 3883 405 0 0 0 chr5 182692164 182692209 -16937941 + (TG)n Simple_repeat Simple_repeat 2 46 0 3511 244 34 50 chr5 182692209 182692388 -16937762 - L1MDa LINE L1 -2657 3883 3703 1180 172 92 77 chr5 182692388 182692726 -16937424 + MER2 DNA MER2_type 1 343 -1 3511 244 34 50 chr5 182692726 182693768 -16936382 - L1MDa LINE L1 -2837 3703 2690 195 42 0 0 chr5 182693771 182693795 -16936355 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 505 135 0 0 chr5 182693837 182693911 -16936239 + AluJ/FLAM SINE Alu 5 78 -234 4074 218 99 43 chr5 182694046 182695106 -16935044 - L1MDa LINE L1 -5176 1364 217 656 56 11 0 chr5 182695106 182695195 -16934955 + (TCTA)n Simple_repeat Simple_repeat 1 90 0 4074 218 99 43 chr5 182695195 182695425 -16934725 - L1MDa LINE L1 -6323 217 1 2009 118 0 34 chr5 182695489 182695786 -16934364 - AluSg1 SINE Alu -17 292 6 2431 72 0 7 chr5 182696094 182696400 -16933750 + AluSq SINE Alu 1 304 -9 313 289 41 33 chr5 182696846 182696967 -16933183 - MIR SINE MIR 0 262 141 287 325 66 33 chr5 182696969 182697120 -16933030 - MIR SINE MIR -89 173 18 1005 140 39 24 chr5 182697423 182697630 -16932520 - AluSq SINE Alu -14 299 90 551 15 0 0 chr5 182700988 182701054 -16929096 - AluY SINE Alu -252 66 1 393 264 68 14 chr5 182702141 182702289 -16927861 - MIR SINE MIR -17 245 90 1272 208 110 6 chr5 182703543 182703860 -16926290 - MLT1A1 LTR MaLR -15 350 1 414 195 71 35 chr5 182704441 182704554 -16925596 + MER63 DNA MER1_type 3 745 -317 494 283 17 28 chr5 182705482 182705662 -16924488 - MER5B DNA MER1_type 0 178 1 239 265 37 118 chr5 182706010 182706146 -16924004 - MIR3 SINE MIR -3 205 81 235 203 68 0 chr5 182706234 182706293 -16923857 - L1MC/D LINE L1 -523 5836 5774 680 193 30 18 chr5 182706304 182706470 -16923680 - L1MB7 LINE L1 0 6184 6017 380 317 83 7 chr5 182706471 182706616 -16923534 - MIR SINE MIR -79 183 28 211 376 75 38 chr5 182706801 182706987 -16923163 + L2 LINE L2 3080 3272 0 1933 157 3 3 chr5 182707063 182707356 -16922794 + AluSx SINE Alu 1 293 -19 255 86 17 35 chr5 182708132 182708190 -16921960 + (TA)n Simple_repeat Simple_repeat 2 58 0 23 0 0 0 chr5 182708845 182708868 -16921282 + AT_rich Low_complexity Low_complexity 1 23 0 474 226 75 48 chr5 182709360 182709506 -16920644 - MIR SINE MIR -104 158 9 794 231 0 0 chr5 182709641 182709851 -16920299 + FRAM SINE Alu 1 74 0 1467 191 7 20 chr5 182711240 182711538 -16918612 - AluSx SINE Alu -18 294 1 272 376 0 0 chr5 182711538 182711631 -16918519 - L2 LINE L2 -39 3233 3141 3385 150 12 21 chr5 182713468 182714134 -16916016 - L1MA4A LINE L1 -22 6281 5622 12894 194 47 30 chr5 182714271 182715857 -16914293 - L1 LINE L1 -3286 3562 2005 2054 155 7 3 chr5 182715857 182716167 -16913983 - AluSx SINE Alu -1 311 1 12894 194 47 30 chr5 182716167 182716545 -16913605 - L1 LINE L1 -4843 2005 1635 2229 75 14 0 chr5 182716545 182716837 -16913313 - AluY SINE Alu -15 296 1 12894 194 47 30 chr5 182716837 182718375 -16911775 - L1 LINE L1 -5213 1635 1 357 362 17 29 chr5 182718393 182718567 -16911583 - MER5B DNA MER1_type -4 174 3 1825 132 73 20 chr5 182718668 182719024 -16911126 + THE1C LTR MaLR 1 375 0 6672 129 28 38 chr5 182719024 182720181 -16909969 + THE1C-int LTR MaLR 1 1145 -435 529 74 11 95 chr5 182720182 182720204 -16909946 + THE1B LTR MaLR 278 300 -64 2150 132 0 0 chr5 182720204 182720508 -16909642 - AluSg SINE Alu -6 304 1 529 74 11 95 chr5 182720508 182720580 -16909570 + THE1B LTR MaLR 300 364 0 221 294 0 0 chr5 182720604 182720655 -16909495 - L2 LINE L2 -8 3264 3214 229 335 89 25 chr5 182720736 182720894 -16909256 - L2 LINE L2 -3 3269 3102 2027 174 21 16 chr5 182722949 182723335 -16906815 - MLT1B LTR MaLR -2 388 1 1064 349 36 23 chr5 182723390 182723946 -16906204 - MLT1K LTR MaLR -6 582 20 254 173 0 19 chr5 182725189 182725241 -16904909 + L2 LINE L2 3263 3313 0 308 280 180 20 chr5 182725283 182725483 -16904667 + HsTC2 DNA Tc2 2 233 -1665 1303 214 120 38 chr5 182725536 182725697 -16904453 + HsTC2 DNA Tc2 1207 1353 -545 2396 86 7 0 chr5 182725697 182726001 -16904149 + AluSg1 SINE Alu 1 306 -3 1303 214 120 38 chr5 182726001 182726315 -16903835 + HsTC2 DNA Tc2 1353 1897 -1 203 179 0 0 chr5 182726659 182726698 -16903452 + A-rich Low_complexity Low_complexity 1 39 0 192 260 170 40 chr5 182727566 182727666 -16902484 + L2 LINE L2 3142 3254 -18 2267 115 0 3 chr5 182727724 182728038 -16902112 - AluSp SINE Alu 0 313 1 704 316 82 48 chr5 182729135 182729845 -16900305 - L2 LINE L2 -1 3312 1728 2331 114 0 16 chr5 182729998 182730315 -16899835 - AluSq SINE Alu -1 312 1 207 345 24 0 chr5 182730322 182730406 -16899744 + L2 LINE L2 3228 3313 0 1938 127 29 20 chr5 182730414 182730761 -16899389 + Tigger2a DNA MER2_type 1 350 -84 201 187 40 13 chr5 182731650 182731725 -16898425 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 256 305 0 0 chr5 182731915 182731997 -16898153 + MLT1E1 LTR MaLR 5 86 -568 256 292 10 10 chr5 182732651 182732747 -16897403 - MER117 DNA MER1_type -83 114 19 219 350 8 42 chr5 182732773 182732893 -16897257 - MIR SINE MIR -63 145 30 269 289 0 12 chr5 182734249 182734332 -16895818 - MIR SINE MIR -1 261 180 221 295 104 16 chr5 182734332 182734490 -16895660 - MIR SINE MIR -31 231 57 332 341 120 5 chr5 182735229 182735446 -16894704 - MIR SINE MIR -16 246 5 623 211 102 0 chr5 182735892 182736039 -16894111 - MER58B DNA MER1_type 0 341 180 31 0 0 0 chr5 182736252 182736283 -16893867 + AT_rich Low_complexity Low_complexity 1 31 0 38 61 0 0 chr5 182736359 182736425 -16893725 + AT_rich Low_complexity Low_complexity 1 66 0 1621 178 19 74 chr5 182736465 182736830 -16893320 - MER7A DNA MER2_type -3 343 1 349 333 0 0 chr5 182736911 182737010 -16893140 - L1MC4 LINE L1 -1330 6712 6614 324 243 0 68 chr5 182736968 182737071 -16893079 + L1MC4 LINE L1 6614 6709 -1333 * 1014 221 119 16 chr5 182737103 182737415 -16892735 - MER2 DNA MER2_type 0 344 1 460 219 10 10 chr5 182737658 182737754 -16892396 - MIR SINE MIR -147 115 20 211 231 0 19 chr5 182737857 182737909 -16892241 + L2 LINE L2 3262 3312 -1 233 206 0 15 chr5 182738322 182738390 -16891760 + (TA)n Simple_repeat Simple_repeat 2 68 0 219 139 0 0 chr5 182738389 182738425 -16891725 + (GA)n Simple_repeat Simple_repeat 2 37 0 * 370 302 79 20 chr5 182738606 182738808 -16891342 - Charlie8 DNA MER1_type -2144 273 60 222 37 0 0 chr5 182739576 182739603 -16890547 + (A)n Simple_repeat Simple_repeat 1 27 0 180 0 0 0 chr5 182740634 182740654 -16889496 + (TG)n Simple_repeat Simple_repeat 1 20 0 199 257 69 69 chr5 182742962 182743063 -16887087 + L2 LINE L2 2342 2442 -872 348 259 78 71 chr5 182743074 182743329 -16886821 + LTR16A1 LTR ERVL 201 457 0 371 364 29 35 chr5 182743329 182743502 -16886648 - MIR SINE MIR -89 173 2 28 61 0 0 chr5 182744129 182744178 -16885972 + AT_rich Low_complexity Low_complexity 1 49 0 267 260 0 48 chr5 182744244 182744348 -16885802 + GA-rich Low_complexity Low_complexity 2 100 0 269 328 98 0 chr5 182745307 182745429 -16884721 + MIR SINE MIR 58 191 -71 2201 125 0 7 chr5 182745492 182745797 -16884353 + AluSx SINE Alu 1 303 -9 967 224 61 46 chr5 182746003 182746483 -16883667 - MLT1E2 LTR MaLR -2 624 56 231 347 65 30 chr5 182746906 182747041 -16883109 + MIR3 SINE MIR 34 169 -39 23 0 0 0 chr5 182747050 182747073 -16883077 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 182747095 182747119 -16883031 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 182747419 182747440 -16882710 + AT_rich Low_complexity Low_complexity 1 21 0 652 265 37 33 chr5 182747735 182747950 -16882200 - Charlie8 DNA MER1_type -2197 220 5 194 320 13 27 chr5 182748034 182748109 -16882041 + MIR3 SINE MIR 99 172 -36 2202 136 0 0 chr5 182748143 182748445 -16881705 - AluSq SINE Alu -11 302 1 407 317 49 12 chr5 182749491 182749655 -16880495 + MIR SINE MIR 93 262 0 2004 109 3 33 chr5 182749660 182749962 -16880188 - AluSg SINE Alu -17 293 1 2147 108 0 65 chr5 182750883 182751206 -16878944 - AluSq SINE Alu -11 302 1 470 274 58 54 chr5 182751585 182751808 -16878342 + MIR SINE MIR 20 243 -19 1514 205 73 9 chr5 182751865 182752207 -16877943 + MLT1A1 LTR MaLR 1 364 -1 23 0 0 0 chr5 182752338 182752361 -16877789 + AT_rich Low_complexity Low_complexity 1 23 0 1317 106 6 0 chr5 182752636 182752815 -16877335 - AluSp SINE Alu -15 298 119 347 269 67 29 chr5 182753375 182753479 -16876671 + L2 LINE L2 3156 3263 -9 549 30 0 0 chr5 182753840 182753907 -16876243 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 938 236 37 0 chr5 182753946 182754162 -16875988 - MER58A DNA MER1_type 0 224 1 272 277 69 85 chr5 182756034 182756222 -16873928 - MIR SINE MIR -50 212 28 375 273 23 0 chr5 182757079 182757167 -16872983 + Tigger2 DNA MER2_type 2629 2718 0 190 338 77 67 chr5 182757192 182757491 -16872659 - L2 LINE L2 -1675 1639 1338 599 257 64 59 chr5 182759673 182760062 -16870088 + L1ME4a LINE L1 5512 5902 -219 217 216 0 0 chr5 182760584 182760621 -16869529 + (TG)n Simple_repeat Simple_repeat 2 38 0 235 125 16 31 chr5 182760713 182760777 -16869373 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 719 302 17 17 chr5 182761374 182761606 -16868544 - MIR SINE MIR -27 235 4 21 0 0 0 chr5 182761748 182761769 -16868381 + AT_rich Low_complexity Low_complexity 1 21 0 855 225 11 6 chr5 182762650 182762832 -16867318 - MER5A DNA MER1_type -1 188 6 234 222 0 0 chr5 182763060 182763114 -16867036 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 234 91 0 0 chr5 182763719 182763752 -16866398 + (TTCC)n Simple_repeat Simple_repeat 1 33 0 231 179 15 104 chr5 182763798 182763865 -16866285 - L2 LINE L2 -8 3305 3245 359 211 95 11 chr5 182764117 182764212 -16865938 + L2 LINE L2 3203 3305 -8 577 188 34 0 chr5 182764337 182764454 -16865696 + MER33 DNA MER1_type 5 125 -199 * 1020 191 6 0 chr5 182764452 182764635 -16865515 + AluJb SINE Alu 124 307 -5 707 169 63 16 chr5 182764648 182764837 -16865313 + MER33 DNA MER1_type 166 363 0 212 30 61 30 chr5 182766188 182766221 -16863929 - L2 LINE L2 -15 3298 3265 614 301 82 25 chr5 182766749 182767031 -16863119 - MLT1J1 LTR MaLR -148 298 1 195 364 15 58 chr5 182767295 182767375 -16862775 + MIR SINE MIR 20 102 -160 1436 212 6 19 chr5 182767375 182767686 -16862464 - AluJb SINE Alu -5 307 1 195 364 15 58 chr5 182767686 182767811 -16862339 + MIR SINE MIR 102 216 -46 576 292 76 69 chr5 182768865 182769329 -16860821 - L2 LINE L2 -93 3220 2746 210 71 0 0 chr5 182769348 182769376 -16860774 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 428 266 36 11 chr5 182771556 182771758 -16858392 - L1M3 LINE L1 -304 5817 5661 447 68 0 0 chr5 182772491 182772550 -16857600 + (TA)n Simple_repeat Simple_repeat 1 59 0 279 146 0 0 chr5 182772710 182772765 -16857385 + (TA)n Simple_repeat Simple_repeat 1 55 0 271 301 10 10 chr5 182772777 182772880 -16857270 - MLT1L LTR MaLR -2 613 511 953 204 16 0 chr5 182773472 182773658 -16856492 - MER5A DNA MER1_type 0 189 1 367 314 68 71 chr5 182773695 182774017 -16856133 - MER102b DNA MER1_type -19 322 2 209 280 98 76 chr5 182775109 182775241 -16854909 - L2 LINE L2 -1 3271 3137 193 68 45 23 chr5 182825995 182826039 -16804111 + A-rich Low_complexity Low_complexity 2 46 0 503 259 122 43 chr5 182826625 182827066 -16803084 - L1ME4a LINE L1 -2 6119 5644 268 276 48 7 chr5 182827482 182827627 -16802523 + (TA)n Simple_repeat Simple_repeat 1 151 0 1823 109 0 106 chr5 182828295 182828616 -16801534 - AluSx SINE Alu -17 295 9 824 174 36 72 chr5 182828854 182829049 -16801101 + AluJo SINE Alu 104 291 -21 1882 144 0 43 chr5 182829088 182829393 -16800757 + AluSx SINE Alu 5 296 -16 1307 139 14 14 chr5 182829400 182829615 -16800535 + AluSg SINE Alu 1 215 -95 185 122 102 61 chr5 182829677 182829726 -16800424 + MIR SINE MIR 95 145 -63 30 83 0 0 chr5 182830732 182830804 -16799346 + AT_rich Low_complexity Low_complexity 1 72 0 269 341 56 16 chr5 182831107 182831233 -16798917 - L1ME4a LINE L1 -2150 5658 5528 693 282 141 29 chr5 182831951 182832291 -16797859 + L2 LINE L2 2936 3313 0 305 315 0 19 chr5 182832559 182832667 -16797483 + (CATATA)n Simple_repeat Simple_repeat 3 108 0 307 280 47 85 chr5 182835025 182835236 -16794914 + MIR SINE MIR 60 262 0 302 330 52 42 chr5 182835305 182835496 -16794654 - MIR3 SINE MIR -6 202 10 231 268 0 18 chr5 182835706 182835762 -16794388 - L2 LINE L2 -3 3269 3215 201 238 0 113 chr5 182835961 182836041 -16794109 + L2 LINE L2 3239 3309 -4 1156 203 44 18 chr5 182836287 182836639 -16793511 + MSTD LTR MaLR 1 396 0 812 175 164 0 chr5 182837689 182837860 -16792290 + AluJo SINE Alu 90 288 -24 234 62 0 0 chr5 182837892 182837924 -16792226 + (CA)n Simple_repeat Simple_repeat 2 33 0 2185 108 3 10 chr5 182838124 182838430 -16791720 - AluSx SINE Alu -8 304 1 206 71 36 36 chr5 182838508 182838564 -16791586 + (TTTTTG)n Simple_repeat Simple_repeat 3 58 0 191 293 286 8 chr5 182838737 182838870 -16791280 + MIR SINE MIR 53 222 -40 236 335 39 52 chr5 182839497 182839635 -16790515 - MIR3 SINE MIR -49 159 38 243 120 40 20 chr5 182839670 182839720 -16790430 + L1MC4 LINE L1 6653 6703 -1339 204 139 70 0 chr5 182839721 182839764 -16790386 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 655 307 0 0 chr5 182840105 182840281 -16789869 + MER5A DNA MER1_type 10 185 -4 314 314 134 31 chr5 182840309 182840503 -16789647 + MIR SINE MIR 48 261 -1 494 350 36 51 chr5 182842022 182842470 -16787680 - L2 LINE L2 0 3313 2873 2126 93 0 4 chr5 182842691 182842969 -16787181 + AluSc SINE Alu 1 277 -32 201 39 0 0 chr5 182842971 182842997 -16787153 + (TAA)n Simple_repeat Simple_repeat 2 27 0 192 40 0 0 chr5 182842997 182843022 -16787128 + (TA)n Simple_repeat Simple_repeat 2 26 0 2351 29 0 0 chr5 182843329 182843606 -16786544 - L1PA4 LINE L1 -6 6149 5873 335 342 140 0 chr5 182843615 182843729 -16786421 - L2 LINE L2 -5 3267 3138 243 268 54 0 chr5 182843786 182843842 -16786308 + L2 LINE L2 3210 3268 -4 200 347 215 12 chr5 182844057 182844308 -16785842 - L2 LINE L2 -469 2845 2544 861 304 85 38 chr5 182844385 182844503 -16785647 + L2 LINE L2 2660 2771 -542 1828 119 63 7 chr5 182844503 182844789 -16785361 - AluSc SINE Alu -7 302 1 861 304 85 38 chr5 182844789 182845304 -16784846 + L2 LINE L2 2771 3313 0 2302 95 0 22 chr5 182845562 182845879 -16784271 + AluY SINE Alu 1 310 -1 281 298 17 12 chr5 182846337 182846437 -16783713 + MIR SINE MIR 40 141 -67 248 279 25 38 chr5 182846568 182846647 -16783503 - MIR SINE MIR -183 79 2 289 250 98 45 chr5 182846647 182846779 -16783371 + L3 LINE CR1 1332 1470 -107 2369 100 0 0 chr5 182847162 182847472 -16782678 + AluSg SINE Alu 1 310 0 356 304 83 30 chr5 182849465 182849633 -16780517 + MIR SINE MIR 56 232 -30 180 111 0 0 chr5 182849642 182849669 -16780481 + (TTA)n Simple_repeat Simple_repeat 1 27 0 655 296 33 17 chr5 182850247 182850487 -16779663 - MIR SINE MIR -4 258 15 289 243 0 29 chr5 182850768 182850838 -16779312 + CT-rich Low_complexity Low_complexity 4 71 0 2366 147 31 17 chr5 182851223 182851645 -16778505 - MSTA LTR MaLR 0 428 1 214 303 91 0 chr5 182851822 182851888 -16778262 - MIR3 SINE MIR -54 154 83 262 300 42 42 chr5 182852122 182852242 -16777908 - MIR SINE MIR -78 184 65 222 150 0 0 chr5 182852367 182852407 -16777743 + (T)n Simple_repeat Simple_repeat 1 40 0 1241 147 49 18 chr5 182852875 182853042 -16777108 + MER46A DNA MER2_type 5 182 -2549 2890 13 0 0 chr5 182853042 182853360 -16776790 + AluYb8 SINE Alu 1 318 0 1241 147 49 18 chr5 182853360 182853417 -16776733 + MER46A DNA MER2_type 182 236 0 672 346 26 23 chr5 182854529 182854876 -16775274 - MLT1I LTR MaLR -49 360 13 955 228 68 19 chr5 182854888 182855239 -16774911 - MLT1A2 LTR MaLR 0 390 1 1576 206 35 0 chr5 182855239 182855549 -16774601 - MLT1A2-int LTR MaLR 0 1735 1415 947 233 0 85 chr5 182855580 182855863 -16774287 - MLT1A2-int LTR MaLR -640 731 473 901 203 108 94 chr5 182855867 182856227 -16773923 + MLT1A1 LTR MaLR 1 365 0 969 190 110 0 chr5 182856232 182856525 -16773625 - MLT1A2-int LTR MaLR -1282 453 9 1177 232 58 26 chr5 182856544 182856889 -16773261 - MLT1A2 LTR MaLR -14 360 5 180 0 0 0 chr5 182857442 182857462 -16772688 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 28 29 0 0 chr5 182857896 182857931 -16772219 + AT_rich Low_complexity Low_complexity 1 35 0 4564 173 71 49 chr5 182858146 182858715 -16771435 - L1MC3 LINE L1 -1 7784 7229 2913 9 0 0 chr5 182858715 182859033 -16771117 - AluYb8 SINE Alu 0 318 1 4564 173 71 49 chr5 182859033 182859203 -16770947 - L1MC3 LINE L1 -556 7229 7064 195 100 0 0 chr5 182859203 182859233 -16770917 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 4564 173 71 49 chr5 182859233 182859553 -16770597 - L1MC3 LINE L1 -721 7064 6701 22 35 0 0 chr5 182860094 182860123 -16770027 + AT_rich Low_complexity Low_complexity 1 29 0 184 368 15 0 chr5 182860206 182860274 -16769876 - MIR SINE MIR -100 108 40 218 129 48 16 chr5 182860319 182860381 -16769769 + (TA)n Simple_repeat Simple_repeat 1 64 0 291 140 0 0 chr5 182860466 182860516 -16769634 + (CA)n Simple_repeat Simple_repeat 2 51 0 219 36 0 0 chr5 182860516 182860544 -16769606 + (TA)n Simple_repeat Simple_repeat 2 29 0 1824 241 19 43 chr5 182862800 182862982 -16767168 - LTR40a LTR ERVL 0 519 334 1645 190 3 7 chr5 182862982 182863271 -16766879 - AluJb SINE Alu -16 296 9 1824 241 19 43 chr5 182863271 182863620 -16766530 - LTR40a LTR ERVL -185 334 1 243 260 0 0 chr5 182863725 182863775 -16766375 - L2 LINE L2 -29 3243 3194 339 167 21 21 chr5 182863844 182863940 -16766210 + CT-rich Low_complexity Low_complexity 4 99 0 264 273 40 71 chr5 182863968 182864067 -16766083 - L2 LINE L2 -18 3295 3200 425 300 74 42 chr5 182865220 182865410 -16764740 - L1ME1 LINE L1 -7 6159 5964 431 303 49 8 chr5 182865513 182865635 -16764515 - MIR SINE MIR -107 155 29 243 188 59 0 chr5 182865825 182865910 -16764240 + (TATATG)n Simple_repeat Simple_repeat 3 92 0 327 49 0 0 chr5 182866606 182866619 -16763531 + (TG)n Simple_repeat Simple_repeat 1 54 0 327 49 0 0 chr5 182866619 182866660 -16763490 + (TG)n Simple_repeat Simple_repeat 2 42 0 311 175 0 126 chr5 182866727 182866830 -16763320 + L1MC4 LINE L1 6614 6703 -1339 308 208 0 94 chr5 182866852 182866948 -16763202 + L1MC4 LINE L1 6617 6703 -1339 603 116 4 91 chr5 182866955 182867426 -16762724 + (TA)n Simple_repeat Simple_repeat 1 429 0 243 273 30 0 chr5 182867485 182867551 -16762599 - MLT1J2 LTR MaLR -119 331 264 307 245 113 28 chr5 182867571 182867677 -16762473 - MLT1I LTR MaLR -203 206 92 666 282 51 78 chr5 182868216 182868549 -16761601 + MER102a DNA MER1_type 1 324 -6 2700 19 0 3 chr5 182869706 182870013 -16760137 - AluYa5 SINE Alu -5 306 1 251 302 241 11 chr5 182870818 182871021 -16759129 + MIR SINE MIR 6 252 -10 25 0 0 0 chr5 182872070 182872095 -16758055 + AT_rich Low_complexity Low_complexity 1 25 0 2333 85 3 19 chr5 182872106 182872423 -16757727 + AluSx SINE Alu 1 312 0 1206 207 38 4 chr5 182872983 182873249 -16756901 + ORSL DNA AcHobo 1 275 0 1878 80 141 0 chr5 182873502 182873765 -16756385 - AluSq SINE Alu -13 300 1 2966 270 145 53 chr5 182873950 182875009 -16755141 + L2 LINE L2 1233 2468 -846 441 0 0 0 chr5 182875009 182875058 -16755092 + (CA)n Simple_repeat Simple_repeat 1 49 0 2966 270 145 53 chr5 182875058 182875478 -16754672 + L2 LINE L2 2468 2848 -466 1262 202 4 4 chr5 182875756 182876008 -16754142 - L1P LINE L1 -986 5160 4908 2123 147 5 18 chr5 182876008 182876382 -16753768 + L1PA13 LINE L1 5784 6158 -5 412 270 88 44 chr5 182876448 182876607 -16753543 + L2 LINE L2 3148 3313 0 252 322 96 50 chr5 182876907 182877106 -16753044 - MIR SINE MIR -41 221 14 22 56 0 0 chr5 182877372 182877408 -16752742 + AT_rich Low_complexity Low_complexity 1 36 0 320 295 115 19 chr5 182879088 182879244 -16750906 - MIR SINE MIR 0 262 92 2418 94 0 0 chr5 182879649 182879956 -16750194 + AluY SINE Alu 5 311 0 514 325 97 19 chr5 182880107 182880418 -16749732 + L1MEd LINE L1 1316 1650 -4880 2370 242 87 33 chr5 182880428 182881794 -16748356 + L1MEd LINE L1 2289 3731 -2809 252 261 87 38 chr5 182881895 182882079 -16748071 + L1M4 LINE L1 2404 2596 -3550 693 277 75 70 chr5 182882089 182882572 -16747578 + L1M4 LINE L1 3001 3485 -2661 309 319 138 13 chr5 182882605 182882837 -16747313 - MIR SINE MIR -1 261 1 250 317 10 20 chr5 182882837 182882933 -16747217 + MIR SINE MIR 157 251 -11 22 35 0 0 chr5 182883834 182883863 -16746287 + AT_rich Low_complexity Low_complexity 1 29 0 838 269 144 73 chr5 182884697 182885191 -16744959 - L1MDa LINE L1 -5432 1108 580 1097 240 36 11 chr5 182885254 182885533 -16744617 - L1MDa LINE L1 -6238 302 17 2736 42 0 0 chr5 182886256 182886567 -16743583 + AluY SINE Alu 1 311 0 2360 85 3 19 chr5 182887538 182887856 -16742294 - AluSp SINE Alu 0 313 1 331 299 120 33 chr5 182887858 182888042 -16742108 + L2 LINE L2 3114 3313 0 1698 159 62 0 chr5 182890319 182890640 -16739510 + MER7A DNA MER2_type 5 343 -3 210 143 0 0 chr5 182891285 182891320 -16738830 + (T)n Simple_repeat Simple_repeat 1 35 0 202 113 0 94 chr5 182892829 182892882 -16737268 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 420 324 34 28 chr5 182894373 182894552 -16735598 + Charlie8 DNA MER1_type 1 180 -2237 205 191 21 0 chr5 182896051 182896098 -16734052 + (TG)n Simple_repeat Simple_repeat 1 48 0 198 0 0 0 chr5 182896697 182896719 -16733431 + (A)n Simple_repeat Simple_repeat 1 22 0 216 276 0 26 chr5 182896805 182896881 -16733269 + (CATA)n Simple_repeat Simple_repeat 2 75 0 186 43 0 0 chr5 182897675 182897698 -16732452 + (CA)n Simple_repeat Simple_repeat 1 23 0 10283 194 28 13 chr5 182898479 182898825 -16731325 - L1PB1 LINE L1 0 6151 5812 405 0 0 0 chr5 182898825 182898870 -16731280 + (TG)n Simple_repeat Simple_repeat 2 46 0 10283 194 28 13 chr5 182898870 182900219 -16729931 - L1PB1 LINE L1 -339 5812 4485 219 88 0 0 chr5 182900219 182900253 -16729897 + (TTG)n Simple_repeat Simple_repeat 3 36 0 10283 194 28 13 chr5 182900253 182901885 -16728265 - L1PB1 LINE L1 -1666 4485 2772 201 121 0 0 chr5 182902258 182902291 -16727859 + (TA)n Simple_repeat Simple_repeat 1 33 0 470 292 87 26 chr5 182902297 182902688 -16727462 - L1ME4a LINE L1 -72 6049 5635 189 429 45 11 chr5 182903903 182904171 -16725979 + L2 LINE L2 2804 3080 -192 744 294 84 39 chr5 182904254 182904356 -16725794 - L2 LINE L2 -756 2558 2462 2138 123 10 0 chr5 182904356 182904656 -16725494 + AluSx SINE Alu 5 307 -5 744 294 84 39 chr5 182904656 182904992 -16725158 - L2 LINE L2 -852 2462 2100 1766 228 99 8 chr5 182905263 182905736 -16724414 + MLT2B1 LTR ERVL 3 518 -2 1789 123 0 0 chr5 182905901 182906154 -16723996 + AluSg SINE Alu 52 304 -6 1361 300 70 35 chr5 182906251 182906925 -16723225 - L2 LINE L2 -148 3165 2484 5270 183 20 74 chr5 182906956 182907608 -16722542 - L1 LINE L1 -813 5333 4792 1700 179 0 10 chr5 182907608 182907905 -16722245 - AluJb SINE Alu -18 294 1 5270 183 20 74 chr5 182907905 182908614 -16721536 - L1 LINE L1 -1354 4792 4046 3704 166 7 18 chr5 182908609 182908645 -16721505 + L1MB1 LINE L1 5346 5381 -787 * 919 234 15 0 chr5 182908645 182908850 -16721300 + MER6B DNA MER2_type 2 209 -1 3704 166 7 18 chr5 182908850 182909499 -16720651 + L1MB1 LINE L1 5381 6024 -144 800 319 66 6 chr5 182909502 182909819 -16720331 - L2 LINE L2 -2720 594 259 275 318 12 0 chr5 182909832 182909917 -16720233 - L2 LINE L2 -3228 86 1 248 222 42 14 chr5 182910215 182910317 -16719833 + GA-rich Low_complexity Low_complexity 1 104 0 315 256 0 99 chr5 182911057 182911178 -16718972 + MIR SINE MIR 38 146 -62 380 312 26 39 chr5 182911186 182911340 -16718810 + MIR SINE MIR 16 167 -95 682 50 20 10 chr5 182911340 182911439 -16718711 + (TTTC)n Simple_repeat Simple_repeat 3 102 0 2018 110 0 31 chr5 182911443 182911733 -16718417 - AluSx SINE Alu -16 296 16 252 217 0 43 chr5 182911776 182911845 -16718305 + MIR SINE MIR 173 238 -24 213 308 176 0 chr5 182912449 182912540 -16717610 - L2 LINE L2 -14 3299 3193 430 336 68 14 chr5 182912572 182912792 -16717358 + MIR SINE MIR 4 235 -27 441 371 94 32 chr5 182912978 182913884 -16716266 - L2 LINE L2 -440 2874 1913 939 172 0 18 chr5 182913953 182914116 -16716034 + AluJb SINE Alu 137 296 -16 21 0 0 0 chr5 182914680 182914701 -16715449 + AT_rich Low_complexity Low_complexity 1 21 0 385 322 43 25 chr5 182915088 182915274 -16714876 + MIR SINE MIR 19 201 -61 220 261 0 0 chr5 182916118 182916164 -16713986 + (TG)n Simple_repeat Simple_repeat 1 46 0 500 0 17 0 chr5 183117155 183117215 -16512935 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 2116 138 0 0 chr5 183117320 183117625 -16512525 + AluSq SINE Alu 1 305 -8 264 130 0 0 chr5 183117664 183117710 -16512440 + (TGGA)n Simple_repeat Simple_repeat 1 46 0 446 264 56 14 chr5 183118027 183118171 -16511979 + L2 LINE L2 3161 3310 -3 2434 67 0 3 chr5 183119294 183119592 -16510558 - AluY SINE Alu -13 298 2 228 315 37 37 chr5 183120037 183120145 -16510005 - MIR3 SINE MIR -53 155 48 1801 40 0 18 chr5 183120362 183120576 -16509574 + L1PA5 LINE L1 5929 6140 -14 416 35 17 0 chr5 183120576 183120634 -16509516 + (TA)n Simple_repeat Simple_repeat 2 60 0 1801 40 0 18 chr5 183120634 183120647 -16509503 + L1PA5 LINE L1 6140 6152 -2 394 351 53 13 chr5 183121149 183121300 -16508850 + MIR3 SINE MIR 29 185 -23 391 246 0 60 chr5 183121952 183122086 -16508064 - MLT1K LTR MaLR 0 588 463 222 191 0 0 chr5 183122124 183122171 -16507979 + (TG)n Simple_repeat Simple_repeat 2 48 0 192 228 0 0 chr5 183122215 183122272 -16507878 + (TG)n Simple_repeat Simple_repeat 2 58 0 452 333 120 9 chr5 183122425 183122641 -16507509 - MLT1K LTR MaLR -311 277 38 576 0 0 0 chr5 183124953 183125017 -16505133 + (TTTTA)n Simple_repeat Simple_repeat 2 65 0 2105 59 7 52 chr5 183125022 183125311 -16504839 - AluSp SINE Alu -37 276 1 22 0 0 0 chr5 183125772 183125794 -16504356 + AT_rich Low_complexity Low_complexity 1 22 0 2430 94 0 0 chr5 183125871 183126180 -16503970 + AluSx SINE Alu 2 310 -2 1006 261 4 30 chr5 183126323 183126591 -16503559 - MIR SINE MIR -1 261 1 3292 202 14 42 chr5 183126640 183127397 -16502753 - L1MB3 LINE L1 -2 6181 5446 416 19 19 0 chr5 183127575 183127628 -16502522 + (CA)n Simple_repeat Simple_repeat 2 55 0 256 348 0 0 chr5 183127765 183127854 -16502296 - MIR SINE MIR -58 150 62 273 57 0 0 chr5 183129745 183129780 -16500370 + (CATA)n Simple_repeat Simple_repeat 4 38 0 3544 141 127 47 chr5 183129823 183130588 -16499562 - LTR1B LTR ERV1 0 826 1 238 325 13 0 chr5 183130931 183131018 -16499132 - MIR SINE MIR -106 102 13 2124 128 10 0 chr5 183131159 183131463 -16498687 - AluSq SINE Alu -6 307 1 22 0 0 0 chr5 183132330 183132352 -16497798 + AT_rich Low_complexity Low_complexity 1 22 0 2262 50 7 7 chr5 183133215 183133523 -16496627 + AluY SINE Alu 1 308 0 1951 157 24 27 chr5 183134737 183135113 -16495037 + THE1C LTR MaLR 1 375 0 2254 92 0 0 chr5 183135613 183135897 -16494253 - AluSq SINE Alu -25 288 5 387 0 0 0 chr5 183138119 183138162 -16491988 + (T)n Simple_repeat Simple_repeat 1 43 0 310 314 40 32 chr5 183138603 183138727 -16491423 + MIR SINE MIR 20 144 -64 397 294 137 19 chr5 183141362 183141573 -16488577 + MIR SINE MIR 12 247 -15 204 241 190 13 chr5 183141612 183141691 -16488459 + MIR SINE MIR 46 138 -124 2252 97 0 7 chr5 183142205 183142503 -16487647 - AluSx SINE Alu -16 296 1 4910 197 84 47 chr5 183142942 183143164 -16486986 - Charlie1a DNA MER1_type -1306 1455 1243 3730 71 4 8 chr5 183143164 183143671 -16486479 - L1PA8 LINE L1 0 6172 5668 4910 197 84 47 chr5 183143671 183144276 -16485874 - Charlie1a DNA MER1_type -1518 1243 662 2179 126 0 3 chr5 183144276 183144586 -16485564 - AluSq SINE Alu -4 309 1 4910 197 84 47 chr5 183144586 183145157 -16484993 - Charlie1a DNA MER1_type -2099 662 5 284 70 23 0 chr5 183145455 183145498 -16484652 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 361 262 19 0 chr5 183145505 183145612 -16484538 + GA-rich Low_complexity Low_complexity 4 112 0 330 342 25 8 chr5 183146670 183146790 -16483360 - MIR SINE MIR -10 252 131 189 213 0 0 chr5 183146791 183146838 -16483312 + (TG)n Simple_repeat Simple_repeat 2 48 0 214 269 51 24 chr5 183146899 183147010 -16483140 - MIR SINE MIR -80 128 18 287 249 68 15 chr5 183147727 183147832 -16482318 - MER5A DNA MER1_type -48 141 17 1512 177 68 106 chr5 183149030 183149425 -16480725 + Cheshire DNA MER1_type 1 380 -2040 * 1711 169 24 32 chr5 183149419 183149791 -16480359 + Cheshire DNA MER1_type 2052 2420 0 304 262 105 76 chr5 183149882 183150054 -16480096 - L1ME4a LINE L1 -1 6120 5944 243 214 60 48 chr5 183150101 183150185 -16479965 - L1ME4a LINE L1 -262 5859 5775 29 0 0 0 chr5 183150238 183150267 -16479883 + AT_rich Low_complexity Low_complexity 1 29 0 382 295 34 13 chr5 183150519 183150668 -16479482 + MIR SINE MIR 103 254 -8 519 255 32 43 chr5 183150817 183151005 -16479145 + MIR SINE MIR 53 238 -24 1605 98 0 0 chr5 183151867 183152072 -16478078 + AluSg SINE Alu 1 205 -105 1269 207 37 81 chr5 183152077 183152425 -16477725 + MLT1B LTR MaLR 58 390 0 231 336 67 39 chr5 183154072 183154176 -16475974 - L2 LINE L2 -13 3259 3153 2475 77 0 0 chr5 183154211 183154522 -16475628 - AluY SINE Alu 0 311 1 216 289 0 0 chr5 183155236 183155371 -16474779 + (TG)n Simple_repeat Simple_repeat 2 136 0 201 228 18 18 chr5 183155375 183155432 -16474718 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 21 36 0 0 chr5 183155829 183155857 -16474293 + AT_rich Low_complexity Low_complexity 1 28 0 3413 275 75 44 chr5 183155957 183157621 -16472529 + L2 LINE L2 1554 3265 -48 578 293 47 45 chr5 183157657 183158128 -16472022 - L1ME4a LINE L1 -192 5929 5458 465 178 192 0 chr5 183158151 183158297 -16471853 - L1MD3 LINE L1 0 7995 7822 423 310 47 55 chr5 183160113 183160368 -16469782 + MIR SINE MIR 2 254 -8 443 311 108 70 chr5 183160591 183160961 -16469189 + L3 LINE CR1 1191 1574 -3 861 205 6 0 chr5 183161035 183161201 -16468949 + FRAM SINE Alu 9 175 -1 571 291 44 36 chr5 183161234 183161485 -16468665 + MIR SINE MIR 10 262 0 207 100 0 0 chr5 183162398 183162428 -16467722 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 23 54 0 0 chr5 183162925 183162962 -16467188 + AT_rich Low_complexity Low_complexity 1 37 0 189 94 0 0 chr5 183163118 183163150 -16467000 + (T)n Simple_repeat Simple_repeat 1 32 0 21 36 0 0 chr5 183166653 183166681 -16463469 + AT_rich Low_complexity Low_complexity 1 28 0 687 196 0 0 chr5 183167162 183167335 -16462815 + (TG)n Simple_repeat Simple_repeat 2 174 0 222 196 0 0 chr5 183167380 183167426 -16462724 + (TG)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr5 183167725 183167747 -16462403 + AT_rich Low_complexity Low_complexity 1 22 0 238 264 182 44 chr5 183169986 183170145 -16460005 + MER5A DNA MER1_type 4 184 -5 1594 123 13 4 chr5 183170146 183170374 -16459776 - AluSx SINE Alu -82 230 1 217 281 8 15 chr5 183170624 183170710 -16459440 + A-rich Low_complexity Low_complexity 3 131 0 1727 179 0 10 chr5 183170873 183171174 -16458976 + AluJb SINE Alu 14 311 -1 22 0 0 0 chr5 183171595 183171617 -16458533 + AT_rich Low_complexity Low_complexity 1 22 0 225 304 0 0 chr5 183172104 183172160 -16457990 + CT-rich Low_complexity Low_complexity 3 58 0 258 302 29 143 chr5 183172934 183173147 -16457003 - L2 LINE L2 -63 3209 3040 732 206 0 15 chr5 183173147 183173278 -16456872 + FLAM_C SINE Alu 1 129 -4 258 302 29 143 chr5 183173278 183173372 -16456778 - L2 LINE L2 -232 3040 2937 22 35 0 0 chr5 183173786 183173815 -16456335 + AT_rich Low_complexity Low_complexity 1 29 0 183 204 0 0 chr5 183175056 183175100 -16455050 + T-rich Low_complexity Low_complexity 1 44 0 2120 106 11 0 chr5 183176081 183176365 -16453785 - AluSx SINE Alu -24 288 2 492 297 79 44 chr5 183176918 183177147 -16453003 - MIR SINE MIR 0 262 26 299 143 18 18 chr5 183177326 183177382 -16452768 + L2 LINE L2 3254 3309 -4 491 112 24 40 chr5 183177829 183177954 -16452196 + GA-rich Low_complexity Low_complexity 3 125 0 194 362 70 97 chr5 183178313 183178642 -16451508 - L2 LINE L2 -7 3265 2946 248 341 44 0 chr5 183178794 183178885 -16451265 + MIR3 SINE MIR 65 159 -49 21 36 0 0 chr5 183179921 183179949 -16450201 + AT_rich Low_complexity Low_complexity 1 28 0 197 321 94 38 chr5 183181878 183181984 -16448166 - L2 LINE L2 -228 3044 2933 2344 90 0 0 chr5 183181988 183182288 -16447862 + AluSx SINE Alu 12 311 -1 236 256 111 67 chr5 183182740 183182830 -16447320 - L2 LINE L2 -41 3231 3138 450 127 0 0 chr5 183182857 183182928 -16447222 + (TA)n Simple_repeat Simple_repeat 1 71 0 1133 102 0 0 chr5 183182928 183183075 -16447075 - AluY SINE Alu -26 285 139 1807 115 100 0 chr5 183185154 183185423 -16444727 + AluSx SINE Alu 1 296 -16 322 241 13 0 chr5 183185691 183185770 -16444380 - MER116 DNA Mariner 0 80 1 183 129 0 0 chr5 183188167 183188198 -16441952 + (T)n Simple_repeat Simple_repeat 1 31 0 351 294 53 41 chr5 183189635 183189805 -16440345 + MIR3 SINE MIR 6 177 -31 586 225 93 80 chr5 183190130 183190547 -16439603 - MLT1D LTR MaLR -12 378 1 286 304 44 15 chr5 183190547 183190680 -16439470 - Charlie8 DNA MER1_type -2152 265 129 752 258 60 0 chr5 183191479 183191661 -16438489 + MIR SINE MIR 66 258 -4 224 326 258 0 chr5 183191743 183191875 -16438275 + MER5A DNA MER1_type 1 166 -23 * 304 227 80 0 chr5 183191803 183191878 -16438272 - MER5A DNA MER1_type -77 112 32 438 226 7 103 chr5 183191894 183192049 -16438101 + MER5B DNA MER1_type 17 156 -22 222 128 0 0 chr5 183193148 183193187 -16436963 + (TTA)n Simple_repeat Simple_repeat 3 41 0 24 67 0 0 chr5 183193343 183193388 -16436762 + AT_rich Low_complexity Low_complexity 1 45 0 306 0 0 0 chr5 183193937 183193971 -16436179 + (CA)n Simple_repeat Simple_repeat 1 34 0 27 49 0 0 chr5 183194175 183194216 -16435934 + AT_rich Low_complexity Low_complexity 1 41 0 238 214 0 0 chr5 183195325 183195367 -16434783 + L2 LINE L2 3267 3308 -5 22 35 0 0 chr5 183195668 183195697 -16434453 + AT_rich Low_complexity Low_complexity 1 29 0 501 301 60 11 chr5 183195972 183196155 -16433995 + MIR SINE MIR 48 239 -23 195 326 35 35 chr5 183196905 183196991 -16433159 + MIR3 SINE MIR 123 208 0 380 164 214 14 chr5 183197633 183197845 -16432305 + MER5C DNA MER1_type 1 324 0 1758 174 78 0 chr5 183198924 183199332 -16430818 - L1MA9 LINE L1 0 6312 5873 312 264 70 39 chr5 183199615 183199744 -16430406 - MIR SINE MIR -43 219 87 180 0 0 0 chr5 183199865 183199885 -16430265 + (TC)n Simple_repeat Simple_repeat 2 21 0 314 185 0 43 chr5 183199888 183199908 -16430242 + (TA)n Simple_repeat Simple_repeat 1 20 -68 2318 100 49 20 chr5 183199908 183200258 -16429892 - THE1B LTR MaLR -3 361 2 314 185 0 43 chr5 183200258 183200329 -16429821 + (TA)n Simple_repeat Simple_repeat 20 88 0 308 278 9 0 chr5 183200330 183200438 -16429712 + L1MC4 LINE L1 6614 6722 -1320 1491 190 0 54 chr5 183201004 183201334 -16428816 - AluJo SINE Alu 0 316 3 185 293 86 17 chr5 183201488 183201546 -16428604 + MIR SINE MIR 52 113 -149 806 127 163 24 chr5 183201991 183202157 -16427993 + MER53 DNA DNA 1 189 0 967 225 85 85 chr5 183203056 183203420 -16426730 + MLT1A1 LTR MaLR 2 365 0 420 306 136 7 chr5 183203490 183203637 -16426513 + MER91A DNA MER1_type 26 191 -5 344 318 91 45 chr5 183203651 183203827 -16426323 + MIR SINE MIR 50 233 -29 552 248 106 45 chr5 183203948 183204146 -16426004 - MER58C DNA MER1_type -4 211 2 2197 97 0 23 chr5 183204311 183204610 -16425540 + AluSq SINE Alu 1 292 -21 871 125 0 22 chr5 183204706 183204842 -16425308 + FLAM_C SINE Alu 1 133 0 1682 183 27 18 chr5 183207890 183208224 -16421926 + MER58B DNA MER1_type 3 339 -2 201 290 115 35 chr5 183208243 183208413 -16421737 + MIR SINE MIR 10 196 -66 234 415 0 13 chr5 183209995 183210147 -16420003 + MER5A DNA MER1_type 34 183 -6 265 170 0 0 chr5 183210420 183210467 -16419683 - MLT1G1 LTR MaLR -5 590 544 872 240 11 0 chr5 183210554 183210733 -16419417 + MER5A DNA MER1_type 4 184 -5 964 254 24 27 chr5 183210758 183211053 -16419097 - MLT1H LTR MaLR -255 294 1 1689 209 29 74 chr5 183211153 183211640 -16418510 - MLT1C LTR MaLR -2 465 1 223 146 36 0 chr5 183212198 183212253 -16417897 + (TTCA)n Simple_repeat Simple_repeat 1 57 0 332 264 118 34 chr5 183212257 183212435 -16417715 - L2 LINE L2 -5 3308 3116 185 295 87 34 chr5 183212731 183212880 -16417270 + MIR SINE MIR 99 255 -7 628 314 26 0 chr5 183213585 183213776 -16416374 - MIR SINE MIR -59 203 8 1944 107 55 0 chr5 183214675 183214947 -16415203 - AluSq SINE Alu -26 287 1 402 286 20 0 chr5 183215191 183215289 -16414861 - MIR3 SINE MIR -33 175 76 192 210 173 49 chr5 183215674 183215755 -16414395 + MIR SINE MIR 130 220 -42 204 97 0 0 chr5 183216122 183216153 -16413997 + (CA)n Simple_repeat Simple_repeat 1 31 0 183 129 0 0 chr5 183216332 183216363 -16413787 + (CA)n Simple_repeat Simple_repeat 2 32 0 228 192 19 19 chr5 183216583 183216635 -16413515 + CT-rich Low_complexity Low_complexity 3 54 0 1936 154 3 0 chr5 183218257 183218276 -16411874 - AluSx SINE Alu -13 299 282 459 0 0 0 chr5 183218276 183218327 -16411823 + (TG)n Simple_repeat Simple_repeat 1 51 0 1936 154 3 0 chr5 183218327 183218605 -16411545 - AluSx SINE Alu -30 282 1 371 304 0 26 chr5 183218811 183218926 -16411224 - L2 LINE L2 -27 3286 3175 195 235 0 0 chr5 183218977 183219028 -16411122 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 300 111 0 0 chr5 183219170 183219215 -16410935 + (CA)n Simple_repeat Simple_repeat 2 46 0 188 313 0 31 chr5 183219999 183220063 -16410087 + MER5B DNA MER1_type 117 178 0 673 335 69 36 chr5 183220413 183220496 -16409654 - L2 LINE L2 -1 3312 3233 291 54 0 0 chr5 183220496 183220533 -16409617 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 673 335 69 36 chr5 183220533 183220926 -16409224 - L2 LINE L2 -80 3233 2820 214 368 23 23 chr5 183221123 183221297 -16408853 + L3b LINE CR1 1152 1325 -258 803 284 50 0 chr5 183222142 183222343 -16407807 - MIR SINE MIR -41 221 11 183 80 0 0 chr5 183222439 183222464 -16407686 + (TCC)n Simple_repeat Simple_repeat 1 25 0 282 143 0 0 chr5 183222664 183222713 -16407437 + (CA)n Simple_repeat Simple_repeat 1 49 0 258 136 0 0 chr5 183223976 183224020 -16406130 + (TA)n Simple_repeat Simple_repeat 2 45 0 22 0 0 0 chr5 183224791 183224813 -16405337 + AT_rich Low_complexity Low_complexity 1 22 0 914 302 8 4 chr5 183224918 183225160 -16404990 + MIR SINE MIR 8 250 -12 976 175 53 0 chr5 183225250 183225439 -16404711 + MER20 DNA MER1_type 16 214 -5 198 272 48 39 chr5 183225450 183225553 -16404597 - MIR SINE MIR -89 173 70 2522 106 195 29 chr5 183225997 183226449 -16403701 + MER1A DNA MER1_type 1 527 0 198 152 0 0 chr5 183226604 183226637 -16403513 + L2 LINE L2 3262 3294 -19 484 233 187 20 chr5 183227666 183227816 -16402334 + MER5A DNA MER1_type 1 175 -14 669 298 16 28 chr5 183228073 183228317 -16401833 + MIR SINE MIR 20 262 0 941 211 29 5 chr5 183228407 183228615 -16401535 + MER20 DNA MER1_type 4 216 -3 2492 65 0 10 chr5 183230319 183230625 -16399525 + AluSq SINE Alu 11 313 0 562 299 91 42 chr5 183231241 183231252 -16398898 - L2 LINE L2 -9 3304 3295 1911 134 0 101 chr5 183231252 183231639 -16398511 + MER7A DNA MER2_type 1 346 0 562 299 91 42 chr5 183231639 183232182 -16397968 - L2 LINE L2 -18 3295 2658 226 290 95 24 chr5 183232380 183232549 -16397601 - MLT1H LTR MaLR -249 300 120 380 348 15 7 chr5 183232647 183232782 -16397368 - L2 LINE L2 -654 2660 2525 232 322 124 0 chr5 183233290 183233407 -16396743 - MIR SINE MIR -34 174 37 388 208 8 104 chr5 183236038 183236163 -16393987 - L2 LINE L2 -2 3311 3199 324 0 0 0 chr5 183236284 183236320 -16393830 + (TG)n Simple_repeat Simple_repeat 2 37 0 270 0 0 0 chr5 183236716 183236746 -16393404 + (T)n Simple_repeat Simple_repeat 1 30 0 185 333 95 0 chr5 183237034 183237118 -16393032 + MIR SINE MIR 91 182 -80 348 330 198 20 chr5 183237197 183237394 -16392756 - MIR SINE MIR -22 240 9 232 338 35 28 chr5 183237445 183237587 -16392563 - L2 LINE L2 -210 3062 2920 192 325 94 25 chr5 183238332 183238535 -16391615 - L2 LINE L2 -872 2442 2226 556 268 105 11 chr5 183238622 183238812 -16391338 - MIR SINE MIR -11 251 44 400 167 10 10 chr5 183240975 183241077 -16389073 + CT-rich Low_complexity Low_complexity 1 102 0 285 98 0 0 chr5 183241358 183241399 -16388751 + (A)n Simple_repeat Simple_repeat 1 41 0 2024 137 3 13 chr5 183248210 183248525 -16381625 + AluSx SINE Alu 1 312 0 276 247 25 0 chr5 183249077 183249158 -16380992 + (TA)n Simple_repeat Simple_repeat 1 83 0 342 0 0 0 chr5 183250976 183251014 -16379136 + (CA)n Simple_repeat Simple_repeat 2 39 0 367 240 55 98 chr5 183251331 183251514 -16378636 + L2 LINE L2 2910 3084 -188 1985 131 9 70 chr5 183251596 183252178 -16377972 - MER51A LTR ERV1 0 634 1 1605 81 5 0 chr5 183252187 183252397 -16377753 - AluY SINE Alu -2 309 99 340 325 0 43 chr5 183252405 183252522 -16377628 + L2 LINE L2 3199 3310 -3 187 333 0 53 chr5 183252929 183253004 -16377146 - L2 LINE L2 -22 3250 3180 40 49 0 0 chr5 183253196 183253257 -16376893 + AT_rich Low_complexity Low_complexity 1 61 0 1340 183 62 50 chr5 183253257 183253346 -16376804 - MER2 DNA MER2_type -1 343 257 1855 141 45 0 chr5 183253346 183253636 -16376514 + AluJb SINE Alu 1 303 -9 1340 183 62 50 chr5 183253636 183253885 -16376265 - MER2 DNA MER2_type -87 257 1 2026 141 7 3 chr5 183256421 183256719 -16373431 + AluSx SINE Alu 1 299 -13 262 217 65 0 chr5 183257070 183257162 -16372988 - L1ME4a LINE L1 -5 6116 6019 180 0 0 0 chr5 183257165 183257185 -16372965 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 32 26 0 0 chr5 183257358 183257397 -16372753 + AT_rich Low_complexity Low_complexity 1 39 0 322 231 68 48 chr5 183258671 183258818 -16371332 - MER103 DNA DNA -1 165 16 215 321 0 12 chr5 183259132 183259213 -16370937 + MIR SINE MIR 72 151 -111 216 326 98 0 chr5 183262797 183262929 -16367221 - MIR3 SINE MIR -6 202 58 180 243 0 0 chr5 183263748 183263785 -16366365 - MIR SINE MIR -62 146 110 21 0 0 0 chr5 183263991 183264012 -16366138 + AT_rich Low_complexity Low_complexity 1 21 0 2478 70 0 10 chr5 183264015 183264329 -16365821 + AluY SINE Alu 1 311 0 2078 118 0 53 chr5 183264659 183264982 -16365168 - AluSx SINE Alu -2 310 5 1630 126 5 0 chr5 183267369 183267591 -16362559 + AluSq SINE Alu 1 223 -90 463 281 23 0 chr5 183268477 183268605 -16361545 - L2 LINE L2 0 3313 3183 758 205 40 35 chr5 183268723 183268923 -16361227 + MER3 DNA MER1_type 7 207 -2 259 360 0 10 chr5 183269416 183269516 -16360634 + GA-rich Low_complexity Low_complexity 1 99 0 184 336 83 80 chr5 183270199 183270672 -16359478 - L2 LINE L2 -52 3261 2789 1867 173 10 3 chr5 183270905 183271200 -16358950 + AluJo SINE Alu 1 297 -15 251 360 71 53 chr5 183272467 183272750 -16357400 - L2 LINE L2 -340 2974 2687 26 30 0 0 chr5 183272780 183272813 -16357337 + AT_rich Low_complexity Low_complexity 1 33 0 210 348 44 51 chr5 183273318 183273476 -16356674 + MER5B DNA MER1_type 2 158 -20 190 284 90 15 chr5 183273533 183273600 -16356550 - MIR SINE MIR -121 87 16 1060 187 44 110 chr5 183273719 183274109 -16356041 - MLT1A2 LTR MaLR -7 367 4 400 234 11 21 chr5 183274120 183274214 -16355936 - MER5B DNA MER1_type -2 176 84 334 225 0 12 chr5 183274550 183274630 -16355520 - Charlie8 DNA MER1_type -1 2416 2338 310 226 20 59 chr5 183274814 183274916 -16355234 - Charlie8 DNA MER1_type -2247 170 73 310 254 209 9 chr5 183275213 183275323 -16354827 - L2 LINE L2 -2 3270 3139 262 256 103 0 chr5 183276686 183276764 -16353386 - MIR SINE MIR -109 153 68 228 35 0 0 chr5 183276974 183277003 -16353147 + (A)n Simple_repeat Simple_repeat 1 29 0 4142 173 44 28 chr5 183277237 183278072 -16352078 - MER21B LTR ERV1 -1 862 14 234 299 15 0 chr5 183278406 183278473 -16351677 - L2 LINE L2 -3 3310 3243 1986 153 73 0 chr5 183279087 183279427 -16350723 - MLT1A1 LTR MaLR 0 365 1 208 313 138 36 chr5 183279449 183279644 -16350506 - MIR SINE MIR -27 235 21 749 273 23 0 chr5 183280605 183280781 -16349369 + MIR SINE MIR 5 184 -78 374 294 80 31 chr5 183280815 183280978 -16349172 - MIR SINE MIR -36 226 56 189 171 0 0 chr5 183284136 183284171 -16345979 + GA-rich Low_complexity Low_complexity 1 35 0 763 222 51 7 chr5 183284733 183284947 -16345203 + L1MD3 LINE L1 6137 7984 -11 194 304 36 0 chr5 183285298 183285354 -16344796 + L2 LINE L2 3215 3272 0 180 243 200 14 chr5 183285624 183285694 -16344456 - MIR SINE MIR 0 262 180 308 189 21 105 chr5 183285726 183285821 -16344329 - MIR SINE MIR -162 100 14 223 293 207 33 chr5 183285877 183286027 -16344123 - MER5B DNA MER1_type -1 177 2 325 243 73 29 chr5 183286481 183286617 -16343533 - Charlie8 DNA MER1_type -2159 258 117 535 275 63 16 chr5 183286958 183287147 -16343003 + MIR SINE MIR 18 215 -47 198 0 0 0 chr5 183288037 183288059 -16342091 + (T)n Simple_repeat Simple_repeat 1 22 0 621 309 88 33 chr5 183288569 183289008 -16341142 - L2 LINE L2 0 3313 2782 219 324 162 9 chr5 183289124 183289229 -16340921 + L2 LINE L2 3147 3267 -5 372 296 35 49 chr5 183289244 183289386 -16340764 + MER5A DNA MER1_type 10 149 -40 4154 139 31 11 chr5 183291347 183292064 -16338086 + L1PA16 LINE L1 5432 6162 -4 2046 232 51 24 chr5 183293100 183293652 -16336498 - MLT1F1 LTR MaLR 0 567 1 343 287 30 43 chr5 183293983 183294147 -16336003 - MER5A DNA MER1_type 0 189 28 * 364 304 36 22 chr5 183294016 183294154 -16335996 + MER5A DNA MER1_type 44 183 -6 2151 125 3 0 chr5 183295047 183295344 -16334806 - AluSx SINE Alu -14 298 1 306 294 131 20 chr5 183296110 183296263 -16333887 + MIR SINE MIR 1 170 -92 399 284 222 0 chr5 183296479 183296655 -16333495 - MIR SINE MIR -1 261 47 762 243 64 5 chr5 183296703 183296905 -16333245 + MIR SINE MIR 47 260 -2 329 145 16 0 chr5 183297362 183297424 -16332726 + GA-rich Low_complexity Low_complexity 3 65 0 440 204 34 0 chr5 183297458 183297546 -16332604 - Tigger7 DNA MER2_type -1 2586 2496 * 2508 198 16 14 chr5 183297545 183298059 -16332091 - Tigger7 DNA MER2_type -212 521 7 667 289 71 91 chr5 183298499 183299018 -16331132 - L2 LINE L2 0 3313 2805 411 281 82 63 chr5 183299230 183299500 -16330650 + L2 LINE L2 3021 3295 -18 251 304 0 0 chr5 183300201 183300257 -16329893 + L2 LINE L2 3202 3257 -15 220 304 0 54 chr5 183300527 183300619 -16329531 - L2 LINE L2 -938 2376 2290 227 261 0 0 chr5 183301153 183301199 -16328951 + polypyrimidine Low_complexity Low_complexity 3 48 0 390 266 9 71 chr5 183301989 183302102 -16328048 - MIR SINE MIR -86 122 17 195 162 0 0 chr5 183302865 183302902 -16327248 + T-rich Low_complexity Low_complexity 4 40 0 2720 32 0 0 chr5 183303122 183303431 -16326719 - AluY SINE Alu -2 309 1 197 56 0 56 chr5 183303494 183303530 -16326620 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 465 310 39 61 chr5 183304416 183304645 -16325505 + MIR SINE MIR 6 229 -33 197 353 68 23 chr5 183304749 183304882 -16325268 - L2 LINE L2 -202 3070 2932 4277 51 16 0 chr5 183304929 183305475 -16324675 + L1PA8 LINE L1 5613 6167 -5 396 0 0 0 chr5 183305578 183305622 -16324528 + (TG)n Simple_repeat Simple_repeat 2 45 0 657 308 163 26 chr5 183306850 183307352 -16322798 + L2 LINE L2 2689 3311 -2 384 269 62 50 chr5 183307371 183307531 -16322619 - MIR3 SINE MIR -24 184 23 234 262 66 90 chr5 183307663 183307785 -16322365 + MIR SINE MIR 73 191 -71 2308 96 3 7 chr5 183307813 183308116 -16322034 + AluSq SINE Alu 1 302 -11 396 71 0 0 chr5 183308310 183308366 -16321784 + (TA)n Simple_repeat Simple_repeat 2 57 0 892 200 28 11 chr5 183308381 183308561 -16321589 + MER5A DNA MER1_type 2 184 -5 517 228 37 76 chr5 183309073 183309319 -16320831 + MIR SINE MIR 6 243 -19 2406 88 0 0 chr5 183309320 183309616 -16320534 + AluSg SINE Alu 1 296 -14 1128 224 30 53 chr5 183310554 183310947 -16319203 - L1MB8 LINE L1 0 6178 5795 634 302 18 6 chr5 183312058 183312227 -16317923 - MIR SINE MIR -91 171 1 1721 161 66 27 chr5 183312287 183312622 -16317528 - MER7A DNA MER2_type 0 346 1 453 193 22 0 chr5 183313551 183313686 -16316464 + (TA)n Simple_repeat Simple_repeat 2 139 0 2257 91 0 3 chr5 183314795 183315092 -16315058 + AluSx SINE Alu 1 296 -16 24 0 0 0 chr5 183315783 183315807 -16314343 + AT_rich Low_complexity Low_complexity 1 24 0 194 189 0 38 chr5 183319010 183319063 -16311087 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 449 350 36 64 chr5 183319197 183319736 -16310414 - L2 LINE L2 -178 3094 2564 216 274 32 16 chr5 183319745 183319807 -16310343 - L2 LINE L2 0 3313 3251 * 496 299 99 10 chr5 183319782 183319983 -16310167 - MIR SINE MIR -32 230 12 324 299 0 0 chr5 183320869 183320956 -16309194 + MIR SINE MIR 34 120 -88 231 276 216 0 chr5 183321089 183321205 -16308945 + MIR SINE MIR 3 143 -119 290 331 16 41 chr5 183321405 183321526 -16308624 + L2 LINE L2 2671 2788 -526 198 128 0 0 chr5 183322328 183322367 -16307783 + (CA)n Simple_repeat Simple_repeat 2 40 0 792 242 6 6 chr5 183322441 183322606 -16307544 - FRAM SINE Alu -1 165 1 600 310 116 16 chr5 183322819 183323138 -16307012 + MLT1K LTR MaLR 66 416 -172 537 236 106 25 chr5 183323490 183323651 -16306499 - MER96 DNA MER1_type -1 174 1 21 57 0 0 chr5 183324123 183324158 -16305992 + AT_rich Low_complexity Low_complexity 1 35 0 455 262 107 48 chr5 183325066 183325234 -16304916 + MER45A DNA AcHobo 1 178 0 367 288 19 44 chr5 183325567 183325727 -16304423 - L2 LINE L2 -377 2937 2782 4026 131 11 41 chr5 183326007 183326768 -16303382 - L1MA5A LINE L1 -1 6296 5559 488 227 58 132 chr5 183326802 183327044 -16303106 - MER58A DNA MER1_type 0 224 1 310 370 6 48 chr5 183327058 183327206 -16302944 + MER5A DNA MER1_type 26 168 -21 1312 198 112 35 chr5 183327206 183327396 -16302754 - MLT1A1 LTR MaLR 0 365 191 1796 139 8 0 chr5 183327396 183327662 -16302488 - AluSq SINE Alu -14 299 32 1312 198 112 35 chr5 183327662 183327810 -16302340 - MLT1A1 LTR MaLR -174 191 1 310 370 6 48 chr5 183327810 183327826 -16302324 + MER5A DNA MER1_type 168 183 -6 2543 61 0 10 chr5 183328928 183329239 -16300911 + AluY SINE Alu 1 308 -3 230 293 37 0 chr5 183329358 183329440 -16300710 - MER103 DNA DNA -44 122 38 1837 159 0 19 chr5 183330007 183330321 -16299829 + AluY SINE Alu 1 308 -3 323 207 49 12 chr5 183330439 183330521 -16299629 - MER103 DNA DNA -44 122 38 195 197 115 33 chr5 183330722 183330783 -16299367 - L2 LINE L2 -2 3270 3205 206 190 69 17 chr5 183331208 183331266 -16298884 + MIR3 SINE MIR 105 165 -43 666 288 138 37 chr5 183331570 183332035 -16298115 - MLT1K LTR MaLR -74 514 3 404 263 9 0 chr5 183332199 183332313 -16297837 - MER94 DNA DNA -15 119 5 403 182 205 34 chr5 183332641 183332796 -16297354 + MER5A DNA MER1_type 4 188 -1 482 107 0 12 chr5 183332984 183333068 -16297082 + (GA)n Simple_repeat Simple_repeat 2 84 0 211 220 80 20 chr5 183333072 183333122 -16297028 + MER5B DNA MER1_type 60 112 -66 766 278 100 55 chr5 183333500 183334187 -16295963 - L1MEd LINE L1 -4970 1149 432 284 288 85 25 chr5 183334287 183334405 -16295745 - MIR SINE MIR -64 144 20 619 325 43 22 chr5 183334916 183335147 -16295003 + MIR SINE MIR 3 238 -24 265 220 0 0 chr5 183336291 183336341 -16293809 + MIR SINE MIR 100 149 -113 27 49 0 0 chr5 183336403 183336444 -16293706 + AT_rich Low_complexity Low_complexity 1 41 0 369 232 11 32 chr5 183336767 183336862 -16293288 + MER81 DNA DNA 1 93 -21 355 295 82 77 chr5 183337174 183337540 -16292610 - MLT1L LTR MaLR -245 370 3 1855 155 7 3 chr5 183338549 183338846 -16291304 + AluSx SINE Alu 7 304 -8 209 310 101 51 chr5 183341094 183341252 -16288898 + MER5A DNA MER1_type 21 186 -3 220 111 37 0 chr5 183341424 183341478 -16288672 + (TA)n Simple_repeat Simple_repeat 2 57 0 333 315 0 0 chr5 183341599 183341707 -16288443 - MIR SINE MIR -1 261 154 219 186 0 0 chr5 183341956 183341999 -16288151 + (TA)n Simple_repeat Simple_repeat 1 43 0 30 0 0 0 chr5 183342868 183342898 -16287252 + AT_rich Low_complexity Low_complexity 1 30 0 518 242 94 7 chr5 183344255 183344404 -16285746 + MIR SINE MIR 53 214 -48 249 317 164 0 chr5 183345330 183345434 -16284716 + MIR SINE MIR 51 171 -91 214 167 15 30 chr5 183347379 183347445 -16282705 + (TA)n Simple_repeat Simple_repeat 1 65 0 532 299 58 23 chr5 183347569 183347967 -16282183 + L1ME4a LINE L1 5708 6119 -2 228 321 151 25 chr5 183350217 183350376 -16279774 - L2 LINE L2 -575 2739 2561 418 257 79 20 chr5 183350932 183351185 -16278965 - L1MC4a LINE L1 -1860 5948 5681 383 287 25 6 chr5 183351236 183351393 -16278757 + (TA)n Simple_repeat Simple_repeat 2 161 0 466 204 20 0 chr5 183351394 183351492 -16278658 - L1MC4a LINE L1 -532 5589 5490 225 132 0 0 chr5 183351628 183351666 -16278484 + (TG)n Simple_repeat Simple_repeat 1 38 0 717 162 0 0 chr5 183351720 183351874 -16278276 + CT-rich Low_complexity Low_complexity 1 154 0 2045 125 45 0 chr5 183351874 183352162 -16277988 - AluSx SINE Alu -11 301 1 429 181 223 0 chr5 183352368 183352462 -16277688 - MER1B DNA MER1_type -180 117 3 328 324 82 48 chr5 183354446 183354653 -16275497 - MIR SINE MIR 0 262 49 667 267 117 0 chr5 183355601 183355807 -16274343 + MIR SINE MIR 8 237 -25 270 133 0 0 chr5 183356541 183356586 -16273564 - MADE1 DNA Mariner 0 80 36 408 315 30 82 chr5 183357480 183357672 -16272478 - L1ME4a LINE L1 -3 6118 5956 357 260 120 41 chr5 183357672 183357914 -16272236 - MIR SINE MIR 0 262 2 408 315 30 82 chr5 183357914 183358124 -16272026 - L1ME4a LINE L1 -165 5956 5737 1627 271 24 4 chr5 183358761 183359212 -16270938 - LTR16B LTR ERVL -2 462 3 1229 109 6 6 chr5 183359453 183359627 -16270523 - AluSg/x SINE Alu -3 309 136 180 0 0 0 chr5 183359802 183359822 -16270328 + (T)n Simple_repeat Simple_repeat 1 20 0 22 56 0 0 chr5 183359957 183359993 -16270157 + AT_rich Low_complexity Low_complexity 1 36 0 195 308 39 0 chr5 183359994 183360072 -16270078 - MIR SINE MIR -67 141 61 329 322 74 16 chr5 183360216 183360337 -16269813 + MIR3 SINE MIR 41 168 -40 246 219 0 0 chr5 183360539 183360603 -16269547 + (TA)n Simple_repeat Simple_repeat 2 65 0 396 0 0 0 chr5 183360615 183360659 -16269491 + (TG)n Simple_repeat Simple_repeat 2 45 0 302 228 25 0 chr5 183360684 183360763 -16269387 + MER113 DNA MER1_type? 341 421 -100 432 236 123 64 chr5 183361744 183361964 -16268186 + L2 LINE L2 3077 3309 -4 362 304 38 32 chr5 183362006 183362164 -16267986 - MER5B DNA MER1_type -3 175 17 271 345 89 18 chr5 183362642 183362810 -16267340 + MIR SINE MIR 2 181 -81 511 211 170 0 chr5 183363932 183364079 -16266071 - MER5B DNA MER1_type -3 175 4 1312 174 61 3 chr5 183364886 183365180 -16264970 - MER58B DNA MER1_type -1 340 30 389 247 93 78 chr5 183365200 183365442 -16264708 - MER113 DNA MER1_type? -156 365 115 2514 68 7 0 chr5 183365442 183365749 -16264401 + AluY SINE Alu 1 309 -2 389 247 93 78 chr5 183365749 183365838 -16264312 - MER113 DNA MER1_type? -406 115 29 227 279 64 87 chr5 183366513 183366778 -16263372 + L2 LINE L2 2638 2896 -418 338 272 0 19 chr5 183366785 183366888 -16263262 - MER20 DNA MER1_type -112 107 7 548 338 107 6 chr5 183366894 183367222 -16262928 + L2 LINE L2 2953 3313 0 2206 87 21 0 chr5 183367228 183367514 -16262636 - AluSq SINE Alu -21 292 1 2282 91 3 0 chr5 183368362 183368671 -16261479 - AluY SINE Alu -1 310 1 548 295 45 29 chr5 183369451 183369695 -16260455 - MIR SINE MIR -13 249 2 221 337 23 12 chr5 183369988 183370074 -16260076 - MIR SINE MIR -2 260 174 308 250 80 10 chr5 183370093 183370193 -16259957 - MER91C DNA MER1_type -19 121 15 300 230 11 35 chr5 183370219 183370306 -16259844 - MIR SINE MIR -174 88 4 234 0 0 0 chr5 183370640 183370666 -16259484 + (A)n Simple_repeat Simple_repeat 1 26 0 489 272 40 50 chr5 183371236 183371438 -16258712 + MIR SINE MIR 63 262 0 240 80 0 0 chr5 183372237 183372287 -16257863 + LTR66 LTR ERVL 394 443 -167 2080 101 0 25 chr5 183372321 183372660 -16257490 - AluSg SINE Alu 0 332 1 226 271 0 0 chr5 183372822 183372881 -16257269 + CT-rich Low_complexity Low_complexity 1 59 0 2139 129 7 0 chr5 183373067 183373370 -16256780 + AluSq SINE Alu 1 305 -8 1186 185 40 11 chr5 183375550 183375826 -16254324 - L1MA9 LINE L1 -270 6042 5759 449 221 22 28 chr5 183375840 183376021 -16254129 + (TA)n Simple_repeat Simple_repeat 1 180 0 371 215 34 40 chr5 183376038 183376215 -16253935 + (TATAA)n Simple_repeat Simple_repeat 4 179 0 2714 152 6 44 chr5 183376269 183376550 -16253600 - L1M2 LINE L1 -519 5793 5503 2611 39 0 3 chr5 183376550 183376855 -16253295 + AluY SINE Alu 1 304 -7 2714 152 6 44 chr5 183376855 183377310 -16252840 - L1M2 LINE L1 -809 5503 5078 582 198 0 0 chr5 183377325 183377441 -16252709 + L1MA10 LINE L1 6218 6333 -1 269 269 8 50 chr5 183377889 183378008 -16252142 + MER117 DNA MER1_type 4 117 -80 207 0 0 0 chr5 183378050 183378073 -16252077 + (GA)n Simple_repeat Simple_repeat 1 23 0 667 264 90 33 chr5 183378196 183378495 -16251655 + MLT1J2 LTR MaLR 3 318 -132 234 237 0 0 chr5 183379621 183379697 -16250453 + GA-rich Low_complexity Low_complexity 1 76 0 245 257 0 40 chr5 183380632 183380706 -16249444 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 227 388 11 6 chr5 183381068 183381246 -16248904 + (CA)n Simple_repeat Simple_repeat 2 180 0 * 373 330 6 33 chr5 183381207 183381389 -16248761 + (CATA)n Simple_repeat Simple_repeat 4 180 0 1724 139 43 32 chr5 183384482 183384841 -16245309 - AluSx SINE Alu 0 362 1 30 45 0 0 chr5 183385152 183385196 -16244954 + AT_rich Low_complexity Low_complexity 1 44 0 270 312 121 0 chr5 183385237 183385378 -16244772 + MIR SINE MIR 5 162 -100 207 256 128 0 chr5 183385379 183385457 -16244693 + L2 LINE L2 3153 3240 -32 360 0 0 0 chr5 183436190 183436230 -16193920 + (GA)n Simple_repeat Simple_repeat 2 41 0 246 105 0 0 chr5 183436325 183436363 -16193787 + (TG)n Simple_repeat Simple_repeat 1 38 0 352 302 134 0 chr5 183436409 183436581 -16193569 - L2 LINE L2 0 3313 3119 1373 205 14 40 chr5 183437903 183438084 -16192066 - AluJo SINE Alu -23 289 118 2228 149 36 14 chr5 183438084 183438447 -16191703 - THE1C LTR MaLR -2 373 3 1373 205 14 40 chr5 183438447 183438562 -16191588 - AluJo SINE Alu -194 118 1 2192 119 0 0 chr5 183438873 183439166 -16190984 + AluSg SINE Alu 1 293 -17 212 246 14 14 chr5 183439669 183439738 -16190412 + MIR SINE MIR 181 249 -13 416 318 35 86 chr5 183440586 183440901 -16189249 - L2 LINE L2 -400 2914 2616 220 333 42 0 chr5 183440942 183441014 -16189136 - L2 LINE L2 -94 3178 3104 222 118 0 0 chr5 183441468 183441502 -16188648 + (CA)n Simple_repeat Simple_repeat 2 35 0 2020 125 0 59 chr5 183441607 183441928 -16188222 - AluSx SINE Alu -10 302 1 214 296 167 9 chr5 183442205 183442313 -16187837 + MIR3 SINE MIR 60 184 -24 858 357 66 13 chr5 183442558 183443015 -16187135 + L3 LINE CR1 993 1473 -104 802 208 26 0 chr5 183443052 183443206 -16186944 - MIR SINE MIR -56 206 49 23 0 0 0 chr5 183444124 183444147 -16186003 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr5 183444977 183445016 -16185134 + AT_rich Low_complexity Low_complexity 1 39 0 339 285 94 43 chr5 183445508 183445672 -16184478 - MIR SINE MIR -62 146 21 246 227 0 0 chr5 183446541 183446607 -16183543 + T-rich Low_complexity Low_complexity 1 66 0 6355 55 0 7 chr5 183446608 183447355 -16182795 - L1PA7 LINE L1 -3 6151 5410 216 353 25 17 chr5 183447657 183447776 -16182374 - MIR3 SINE MIR -3 205 86 474 257 87 27 chr5 183447788 183447971 -16182179 + LTR33 LTR ERVL 1 194 -327 463 198 27 18 chr5 183448285 183448396 -16181754 + LTR33 LTR ERVL 410 521 0 334 219 135 31 chr5 183448550 183448646 -16181504 + MIR SINE MIR 1 106 -156 538 290 65 37 chr5 183448673 183448890 -16181260 + MIR SINE MIR 39 261 -1 2236 92 11 0 chr5 183450185 183450468 -16179682 - AluSx SINE Alu -26 286 1 478 273 88 34 chr5 183450711 183450916 -16179234 + L2 LINE L2 3078 3293 -20 200 35 35 0 chr5 183451639 183451668 -16178482 + (TC)n Simple_repeat Simple_repeat 1 30 0 302 366 83 58 chr5 183455415 183455971 -16174179 - L2 LINE L2 -8 3305 2736 3224 198 12 14 chr5 183456027 183456112 -16174038 + L1MB3 LINE L1 5450 5534 -649 2397 99 0 6 chr5 183456112 183456426 -16173724 + AluSx SINE Alu 1 312 0 3224 198 12 14 chr5 183456426 183457031 -16173119 + L1MB3 LINE L1 5534 6109 -74 215 369 102 0 chr5 183457197 183457354 -16172796 - L2 LINE L2 -644 2670 2498 937 285 16 4 chr5 183458188 183458444 -16171706 + MIR SINE MIR 4 262 0 359 238 33 66 chr5 183459689 183459811 -16170339 - L2 LINE L2 -13 3300 3183 206 260 200 27 chr5 183460030 183460180 -16169970 - MIR SINE MIR -36 226 51 258 219 0 47 chr5 183460673 183460737 -16169413 + GA-rich Low_complexity Low_complexity 3 63 0 24 32 0 0 chr5 183461894 183461925 -16168225 + AT_rich Low_complexity Low_complexity 1 31 0 2407 85 7 0 chr5 183464593 183464898 -16165252 - AluSp SINE Alu -6 307 1 257 343 84 42 chr5 183465248 183465414 -16164736 - L2 LINE L2 -2 3270 3098 230 187 151 22 chr5 183465429 183465496 -16164654 + L1ME4a LINE L1 5612 5679 -442 231 259 0 17 chr5 183465509 183465567 -16164583 + L2 LINE L2 3216 3272 0 326 234 120 11 chr5 183465580 183465764 -16164386 + L1ME4a LINE L1 5712 5915 -206 342 0 0 0 chr5 183465793 183465831 -16164319 + (CA)n Simple_repeat Simple_repeat 1 38 0 2141 129 10 0 chr5 183465954 183466263 -16163887 + AluJb SINE Alu 1 312 0 216 67 0 0 chr5 183466266 183466296 -16163854 + (TA)n Simple_repeat Simple_repeat 2 31 0 371 250 54 34 chr5 183466865 183467013 -16163137 + L1ME4a LINE L1 5964 6114 -7 30 45 0 0 chr5 183467019 183467063 -16163087 + AT_rich Low_complexity Low_complexity 1 44 0 572 329 40 32 chr5 183467116 183467368 -16162782 + MIR SINE MIR 4 257 -5 952 182 64 50 chr5 183467526 183467746 -16162404 + MER58A DNA MER1_type 2 224 0 550 236 87 137 chr5 183469663 183469848 -16160302 - MER113 DNA MER1_type? -6 515 322 3853 192 3 8 chr5 183469848 183470503 -16159647 - MER82 DNA MER2_type 0 653 2 550 236 87 137 chr5 183470503 183470660 -16159490 - MER113 DNA MER1_type? -199 322 205 1609 184 0 0 chr5 183470660 183470921 -16159229 + AluJb SINE Alu 1 261 -51 550 236 87 137 chr5 183470921 183471094 -16159056 - MER113 DNA MER1_type? -316 205 25 1572 171 66 0 chr5 183471375 183471661 -16158489 + AluJb SINE Alu 1 305 -7 2476 84 3 0 chr5 183471663 183471971 -16158179 + AluSp SINE Alu 1 309 -4 197 116 0 23 chr5 183472804 183472847 -16157303 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 407 173 0 48 chr5 183473430 183473534 -16156616 + GSATX Satellite centromeric 67 165 -53 486 300 22 66 chr5 183473765 183473992 -16156158 + MIR SINE MIR 17 233 -29 194 226 16 65 chr5 183474157 183474219 -16155931 - L2 LINE L2 -67 3246 3188 695 300 39 35 chr5 183475989 183476246 -16153904 - MLT1K LTR MaLR -168 420 163 182 367 46 28 chr5 183476617 183476726 -16153424 - MIR SINE MIR -26 236 126 545 342 29 40 chr5 183477180 183477452 -16152698 - MLT1K LTR MaLR -251 337 69 180 321 131 0 chr5 183477487 183477571 -16152579 - MIR SINE MIR -95 113 19 216 323 238 37 chr5 183477753 183477942 -16152208 + MIR SINE MIR 9 235 -27 228 250 33 0 chr5 183478271 183478331 -16151819 - MLT1J1 LTR MaLR 0 446 385 190 306 41 0 chr5 183478690 183478739 -16151411 + L2 LINE L2 3186 3236 -36 313 277 36 0 chr5 183479367 183479450 -16150700 + MIR SINE MIR 3 88 -174 214 277 0 0 chr5 183479500 183479547 -16150603 + MIR SINE MIR 206 252 -10 476 79 86 0 chr5 183481048 183481200 -16148950 + (TA)n Simple_repeat Simple_repeat 1 165 0 473 297 58 107 chr5 183481340 183481751 -16148399 + Charlie8 DNA MER1_type 32 422 -1995 552 242 22 82 chr5 183482812 183483064 -16147086 + MIR SINE MIR 30 262 0 2170 116 20 3 chr5 183483184 183483485 -16146665 + AluJb SINE Alu 1 306 -6 927 193 136 4 chr5 183484403 183484664 -16145486 + L1MD3 LINE L1 7490 7990 -1 298 310 223 22 chr5 183485768 183486091 -16144059 + L2 LINE L2 2590 2977 -337 237 65 0 0 chr5 183486241 183486272 -16143878 + (TG)n Simple_repeat Simple_repeat 1 31 0 313 210 97 0 chr5 183486786 183486848 -16143302 - Charlie8 DNA MER1_type -2210 207 140 331 245 183 62 chr5 183487622 183487830 -16142320 - MIR SINE MIR -1 261 29 471 236 24 8 chr5 183488911 183489034 -16141116 - MER113 DNA MER1_type? -48 473 349 464 213 52 46 chr5 183489033 183489207 -16140943 - MER113 DNA MER1_type? -279 242 68 * 364 203 23 83 chr5 183489514 183489647 -16140503 - MER5A DNA MER1_type -25 164 40 186 43 0 0 chr5 183490753 183490776 -16139374 + (A)n Simple_repeat Simple_repeat 1 23 0 390 42 0 0 chr5 183490776 183490824 -16139326 + (TA)n Simple_repeat Simple_repeat 2 49 0 273 363 48 8 chr5 183491000 183491124 -16139026 - L2 LINE L2 -28 3244 3116 1601 187 61 47 chr5 183491522 183491552 -16138598 - MLT1A1 LTR MaLR -1 364 336 330 67 0 0 chr5 183491552 183491597 -16138553 + (CA)n Simple_repeat Simple_repeat 2 46 0 1601 187 61 47 chr5 183491597 183491925 -16138225 - MLT1A1 LTR MaLR -29 336 1 198 209 0 0 chr5 183493336 183493379 -16136771 + CT-rich Low_complexity Low_complexity 3 45 0 302 273 21 0 chr5 183493417 183493524 -16136626 - L1MB7 LINE L1 -11 6169 6059 1273 199 26 0 chr5 183493601 183493827 -16136323 + MER46A DNA MER2_type 3 234 -2 440 275 137 28 chr5 183494196 183494378 -16135772 - MIR SINE MIR -43 219 18 199 252 290 9 chr5 183495101 183495208 -16134942 + L2 LINE L2 3175 3311 -2 225 293 9 47 chr5 183495910 183496016 -16134134 - MIR SINE MIR -2 260 159 319 295 157 31 chr5 183496025 183496286 -16133864 - MLT1K LTR MaLR -23 565 272 1772 253 40 73 chr5 183496340 183496917 -16133233 - MER77 LTR ERV1 -7 598 41 23 0 0 0 chr5 183497280 183497303 -16132847 + AT_rich Low_complexity Low_complexity 1 23 0 708 221 21 0 chr5 183497457 183497602 -16132548 + MER5B DNA MER1_type 1 148 -30 287 234 47 0 chr5 183497819 183497883 -16132267 + MIR SINE MIR 74 140 -122 195 42 0 0 chr5 183497916 183497940 -16132210 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2005 133 0 0 chr5 183497945 183498216 -16131934 - AluSx SINE Alu -36 276 6 496 309 0 17 chr5 183498549 183498730 -16131420 - MER104 DNA MER2_type -2 178 1 6943 60 8 53 chr5 183600474 183601629 -16028521 + SVA Other Other 432 1386 0 395 345 121 10 chr5 183601654 183601860 -16028290 + L1M4c LINE L1 1371 1599 -4785 392 206 21 78 chr5 183602018 183602131 -16028019 + MIR SINE MIR 91 196 -66 2776 88 5 5 chr5 183602131 183602506 -16027644 - THE1C LTR MaLR 0 375 1 392 206 21 78 chr5 183602506 183602533 -16027617 + MIR SINE MIR 196 223 -39 355 304 52 36 chr5 183602635 183602829 -16027321 - MLT1K LTR MaLR -379 209 13 231 213 33 0 chr5 183603302 183603345 -16026805 + (CATA)n Simple_repeat Simple_repeat 1 48 -15 1541 122 0 0 chr5 183603345 183603559 -16026591 + AluSg/x SINE Alu 83 296 -14 231 213 33 0 chr5 183603559 183603576 -16026574 + (CATA)n Simple_repeat Simple_repeat 48 63 0 355 200 154 39 chr5 183603576 183603706 -16026444 + L1ME3 LINE L1 5541 5685 -479 816 200 15 41 chr5 183603717 183603912 -16026238 + AluJo SINE Alu 115 304 -8 1720 213 118 8 chr5 183603923 183604369 -16025781 + L1ME3 LINE L1 5678 6331 -3 374 240 167 13 chr5 183604469 183604619 -16025531 + MER112 DNA MER1_type 87 259 -1 281 299 45 8 chr5 183604624 183604758 -16025392 - L2 LINE L2 -557 2757 2619 372 281 55 60 chr5 183605082 183605155 -16024995 - MIR SINE MIR -18 244 172 1652 127 35 19 chr5 183605155 183605414 -16024736 - AluJb SINE Alu -11 301 39 372 281 55 60 chr5 183605414 183605539 -16024611 - MIR SINE MIR -90 172 47 1361 194 47 40 chr5 183605544 183605843 -16024307 + AluJo SINE Alu 5 305 -7 622 195 25 0 chr5 183605847 183605965 -16024185 + FLAM_C SINE Alu 10 130 -13 3620 139 38 7 chr5 183606659 183607240 -16022910 + MER4D LTR ERV1 1 599 -304 21141 55 4 0 chr5 183607243 183610681 -16019469 - L1PA5 LINE L1 -1 6153 2708 912 69 17 0 chr5 183610681 183610797 -16019353 - L1P LINE L1 -2512 3634 3517 17940 103 12 31 chr5 183610824 183613569 -16016581 - L1PA5 LINE L1 -3444 2702 11 1649 118 42 82 chr5 183613588 183613894 -16016256 + MER4E LTR ERV1 486 779 0 339 78 0 0 chr5 183613903 183613954 -16016196 + (TC)n Simple_repeat Simple_repeat 2 52 0 257 51 26 0 chr5 183613954 183613993 -16016157 + (CA)n Simple_repeat Simple_repeat 1 40 0 187 146 36 36 chr5 183615555 183615610 -16014540 + GA-rich Low_complexity Low_complexity 2 56 0 398 266 85 17 chr5 183615672 183615849 -16014301 + L2 LINE L2 1711 1899 -1415 216 0 0 0 chr5 183615890 183615914 -16014236 + (A)n Simple_repeat Simple_repeat 1 24 0 292 291 58 0 chr5 183616244 183616347 -16013803 - MIR SINE MIR -85 177 69 1894 164 6 16 chr5 183617108 183617241 -16012909 + AluJb SINE Alu 1 134 -178 2159 119 3 13 chr5 183617241 183617552 -16012598 + AluSx SINE Alu 1 308 -4 1894 164 6 16 chr5 183617552 183617730 -16012420 + AluJb SINE Alu 134 309 -3 450 336 36 31 chr5 183617888 183618111 -16012039 + L1ME3A LINE L1 919 1142 -4977 667 202 0 16 chr5 183618120 183618249 -16011901 + FLAM_C SINE Alu 9 135 -8 411 326 39 52 chr5 183618251 183618287 -16011863 + HAL1 LINE L1 1241 1276 -1231 1892 147 0 11 chr5 183618287 183618598 -16011552 - AluJo SINE Alu 0 308 1 411 326 39 52 chr5 183618598 183618793 -16011357 + HAL1 LINE L1 1276 1470 -1037 483 134 0 0 chr5 183618897 183618979 -16011171 + (GA)n Simple_repeat Simple_repeat 2 83 0 1482 239 77 29 chr5 183618979 183619296 -16010854 - L1ME3A LINE L1 -34 6136 5793 1028 183 4 89 chr5 183619296 183619531 -16010619 - MER20 DNA MER1_type -4 215 1 1482 239 77 29 chr5 183619531 183619631 -16010519 - L1ME3A LINE L1 -377 5793 5699 315 0 0 0 chr5 183620070 183620105 -16010045 + (TA)n Simple_repeat Simple_repeat 1 35 0 1527 201 68 12 chr5 183620467 183620898 -16009252 + L1ME3A LINE L1 2708 5382 -785 811 129 73 0 chr5 183620910 183621034 -16009116 - FLAM_C SINE Alu 0 133 1 2351 148 14 29 chr5 183621094 183621507 -16008643 + L1MA9 LINE L1 5886 6292 -20 377 105 0 0 chr5 183621509 183621566 -16008584 + L1MA9 LINE L1 6251 6307 -5 2389 233 22 40 chr5 183621593 183621648 -16008502 + L1ME3A LINE L1 5455 5509 -644 1887 135 39 0 chr5 183621648 183621929 -16008221 - AluJo SINE Alu -20 292 1 2389 233 22 40 chr5 183621929 183622543 -16007607 + L1ME3A LINE L1 5509 6102 -51 1931 160 0 13 chr5 183622543 183622849 -16007301 - AluJo SINE Alu -10 302 1 2389 233 22 40 chr5 183622849 183622900 -16007250 + L1ME3A LINE L1 6102 6152 -1 247 281 0 0 chr5 183622905 183622969 -16007181 - MIR SINE MIR -183 79 16 1348 198 42 100 chr5 183623032 183623340 -16006810 - MLT2D LTR ERVL -15 505 118 2064 205 79 118 chr5 183623340 183623680 -16006470 + MER21B LTR ERV1 1 353 -510 701 193 0 22 chr5 183623680 183623815 -16006335 + FLAM_A SINE Alu 2 133 0 2064 205 79 118 chr5 183623815 183623827 -16006323 + MER21B LTR ERV1 353 364 -499 1893 135 25 14 chr5 183623827 183624128 -16006022 + AluSx SINE Alu 1 304 0 2064 205 79 118 chr5 183624128 183624607 -16005543 + MER21B LTR ERV1 364 802 -61 22 0 0 0 chr5 183624697 183624719 -16005431 + AT_rich Low_complexity Low_complexity 1 22 0 560 182 0 0 chr5 183624719 183624818 -16005332 - MLT2D LTR ERVL -315 99 1 1728 158 0 23 chr5 183625017 183625283 -16004867 + AluJo SINE Alu 5 264 -48 270 136 0 0 chr5 183625318 183625362 -16004788 + (GGA)n Simple_repeat Simple_repeat 3 46 0 1706 156 91 0 chr5 183625604 183625879 -16004271 - AluJb SINE Alu -12 300 1 2038 145 7 0 chr5 183625881 183626177 -16003973 - AluSx SINE Alu -14 298 1 2957 145 47 14 chr5 183626360 183626851 -16003299 - MER84 LTR ERV1 0 507 1 495 77 39 13 chr5 183626854 183626932 -16003218 - MER84 LTR ERVI -427 80 1 329 289 151 18 chr5 183626944 183627169 -16002981 + L1MC/D LINE L1 4797 5051 -1095 243 0 0 0 chr5 183627216 183627243 -16002907 + (T)n Simple_repeat Simple_repeat 1 27 0 288 283 35 90 chr5 183628133 183628456 -16001694 + L1MC/D LINE L1 5274 5586 -747 2015 217 194 75 chr5 183628657 183629509 -16000641 + LTR28 LTR ERV1 1 953 -67 258 295 18 45 chr5 183629534 183629646 -16000504 + LTR27 LTR ERV1 528 636 0 498 339 83 9 chr5 183629653 183630072 -16000078 + L2 LINE L2 2409 2858 -456 2388 224 73 20 chr5 183630235 183630651 -15999499 - L1MC4 LINE L1 -7 8035 7568 1840 146 3 14 chr5 183630651 183630938 -15999212 - AluJo SINE Alu -28 284 1 2388 224 73 20 chr5 183630938 183631205 -15998945 - L1MC4 LINE L1 -474 7568 7316 743 244 183 26 chr5 183631664 183632013 -15998137 + HAL1 LINE L1 1304 1707 -800 688 196 0 0 chr5 183632332 183632444 -15997706 + FRAM SINE Alu 1 112 -64 1553 73 0 0 chr5 183633393 183633572 -15996578 + AluSq SINE Alu 22 200 -113 222 118 0 0 chr5 183633595 183633629 -15996521 + (A)n Simple_repeat Simple_repeat 1 34 0 610 275 55 5 chr5 183633824 183634042 -15996108 + MIR SINE MIR 28 256 -6 383 311 0 15 chr5 183634485 183634620 -15995530 - MIR3 SINE MIR -73 135 3 489 121 48 12 chr5 183634679 183634762 -15995388 + FLAM_A SINE Alu 37 122 -20 2178 118 3 0 chr5 183634765 183635061 -15995089 + AluSq SINE Alu 1 297 -16 737 278 45 8 chr5 183635062 183635307 -15994843 - MIR SINE MIR 0 262 9 749 266 32 53 chr5 183635792 183636074 -15994076 + LTR16A1 LTR ERVL 180 455 -2 2068 309 66 44 chr5 183636081 183637379 -15992771 + HERV16 LTR ERVL 5 1331 -3665 744 334 82 8 chr5 183637394 183638083 -15992067 + HERVL LTR ERVL 4369 5160 -604 1077 263 39 22 chr5 183638397 183638754 -15991396 + LTR16A1 LTR ERVL 1 363 -94 425 247 72 72 chr5 183638758 183638924 -15991226 + MER45A DNA AcHobo 13 178 0 255 230 138 11 chr5 183638924 183639006 -15991144 + LTR16A1 LTR ERVL 351 443 -14 240 293 21 0 chr5 183639335 183639463 -15990687 - MIR SINE MIR -65 143 15 2219 113 10 0 chr5 183639833 183640133 -15990017 - AluSx SINE Alu -9 303 1 223 342 27 0 chr5 183640212 183640323 -15989827 - L3 LINE CR1 -348 1229 1116 705 273 125 52 chr5 183640337 183640777 -15989373 - MLT1K LTR MaLR -2 586 115 337 95 206 0 chr5 183640886 183640949 -15989201 + L1PA13 LINE L1 6088 6163 0 27 0 0 0 chr5 183641003 183641030 -15989120 + AT_rich Low_complexity Low_complexity 1 27 0 446 240 96 41 chr5 183641536 183641682 -15988468 - MIR SINE MIR -89 173 20 414 341 32 36 chr5 183641942 183642194 -15987956 + MIR SINE MIR 2 252 -10 391 333 0 8 chr5 183642192 183642318 -15987832 + L2 LINE L2 3144 3268 -4 * 1048 204 156 48 chr5 183642536 183642888 -15987262 + MLT1B LTR MaLR 1 390 0 363 210 185 8 chr5 183642895 183643014 -15987136 - L2 LINE L2 -349 2965 2826 2262 112 0 0 chr5 183643102 183643407 -15986743 - AluSx SINE Alu -7 305 1 370 141 56 14 chr5 183643994 183644065 -15986085 + MER84 LTR ERVI 1 74 -433 3284 98 64 17 chr5 183644066 183644548 -15985602 + MER84 LTR ERV1 3 507 0 902 211 42 21 chr5 183644629 183644819 -15985331 + MER20 DNA MER1_type 1 194 -25 189 107 0 0 chr5 183644893 183644921 -15985229 + (CA)n Simple_repeat Simple_repeat 1 28 0 460 256 16 8 chr5 183645063 183645184 -15984966 + L2 LINE L2 3189 3310 -3 410 275 56 28 chr5 183645662 183645840 -15984310 + MLT1F1 LTR MaLR 379 561 -6 263 323 39 0 chr5 183645855 183645985 -15984165 + MLT1F1-int LTR MaLR 5 139 -1232 1624 207 0 22 chr5 183646257 183646571 -15983579 + AluJb SINE Alu 1 307 -5 207 0 0 0 chr5 183647267 183647290 -15982860 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 28974 58 2 2 chr5 183647292 183651745 -15978405 + L1PA5 LINE L1 1693 6146 -8 321 172 0 0 chr5 183651822 183651886 -15978264 + MIR SINE MIR 186 249 -13 334 335 60 0 chr5 183652485 183652667 -15977483 + L2 LINE L2 2625 2817 -497 217 286 57 0 chr5 183653000 183653070 -15977080 - MER5C DNA MER1_type -250 74 1 3836 131 8 21 chr5 183653094 183653707 -15976443 - MER6A DNA MER2_type 0 605 1 384 22 0 0 chr5 183654213 183654258 -15975892 + (CA)n Simple_repeat Simple_repeat 1 45 0 308 326 30 22 chr5 183654313 183654448 -15975702 - L2 LINE L2 -1 3271 3136 1868 124 40 4 chr5 183654499 183654811 -15975339 + AluSx SINE Alu 1 322 0 468 317 98 5 chr5 183654955 183655160 -15974990 - MIR SINE MIR -34 228 5 210 393 63 19 chr5 183655475 183655681 -15974469 - L2 LINE L2 -52 3220 3006 217 339 57 65 chr5 183655785 183656039 -15974111 - L2 LINE L2 -430 2884 2629 685 180 0 65 chr5 183656039 183656178 -15973972 - FLAM_A SINE Alu -1 132 3 217 339 57 65 chr5 183656178 183656190 -15973960 - L2 LINE L2 -685 2629 2618 2149 101 4 0 chr5 183656190 183656489 -15973661 - AluSx SINE Alu 0 304 5 217 339 57 65 chr5 183656489 183656710 -15973440 - L2 LINE L2 -696 2618 2399 519 308 92 29 chr5 183657143 183657383 -15972767 + L2 LINE L2 3054 3308 -5 863 169 0 0 chr5 183657466 183657631 -15972519 - FLAM_A SINE Alu 0 168 4 259 272 187 27 chr5 183657811 183658330 -15971820 + L2 LINE L2 2656 3308 -5 225 197 0 0 chr5 183658347 183658408 -15971742 + (ATG)n Simple_repeat Simple_repeat 3 63 0 390 147 0 0 chr5 183658553 183658621 -15971529 + (TG)n Simple_repeat Simple_repeat 2 69 0 21 0 0 0 chr5 183659196 183659217 -15970933 + AT_rich Low_complexity Low_complexity 1 21 0 1543 126 0 0 chr5 183659217 183659432 -15970718 + AluSq SINE Alu 3 217 -96 2346 71 0 29 chr5 183659437 183659745 -15970405 + AluY SINE Alu 1 299 -12 391 242 22 28 chr5 183659747 183659878 -15970272 - MIR3 SINE MIR -54 154 20 207 0 0 0 chr5 183660457 183660480 -15969670 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1744 152 0 28 chr5 183660484 183660767 -15969383 + AluJo SINE Alu 1 275 -37 319 204 0 0 chr5 183660768 183660822 -15969328 + AluJ/monomer SINE Alu 238 291 -10 1955 113 0 0 chr5 183661028 183661285 -15968865 + AluSx SINE Alu 44 300 -12 2403 89 0 7 chr5 183661379 183661681 -15968469 - AluY SINE Alu -11 300 1 263 132 0 0 chr5 183661681 183661719 -15968431 - MSTC LTR MaLR -12 416 379 * 366 174 291 0 chr5 183661708 183661794 -15968356 - FLAM_C SINE Alu -17 116 6 667 185 0 0 chr5 183661795 183661903 -15968247 - AluJo/FLAM SINE Alu -203 109 2 694 166 79 7 chr5 183661991 183662130 -15968020 - MSTC LTR MaLR -218 210 62 220 245 84 112 chr5 183662189 183662256 -15967894 - MIR SINE MIR -71 191 124 1283 197 7 53 chr5 183662256 183662560 -15967590 + AluJo SINE Alu 1 290 -22 220 245 84 112 chr5 183662560 183662635 -15967515 - MIR SINE MIR -138 124 53 667 199 106 31 chr5 183662665 183662720 -15967430 - FAM SINE Alu -148 173 124 4477 122 3 2 chr5 183662720 183663354 -15966796 - MER41B LTR ERV1 0 635 1 667 199 106 31 chr5 183663354 183663459 -15966691 - FAM SINE Alu -197 124 1 229 258 41 41 chr5 183663484 183663581 -15966569 + MIR SINE MIR 160 256 -6 213 293 40 0 chr5 183663852 183663927 -15966223 + MIR3 SINE MIR 82 159 -49 213 39 0 0 chr5 183664683 183664709 -15965441 + (CGG)n Simple_repeat Simple_repeat 3 28 0 24 53 0 0 chr5 183664849 183664887 -15965263 + GC_rich Low_complexity Low_complexity 1 38 0 360 248 26 9 chr5 183665575 183665688 -15964462 - L1ME4a LINE L1 -56 6065 5951 31 0 0 0 chr5 183666236 183666267 -15963883 + AT_rich Low_complexity Low_complexity 1 31 0 1188 114 0 29 chr5 183666646 183666821 -15963329 + AluJo SINE Alu 1 170 -142 2117 106 0 3 chr5 183667106 183667416 -15962734 + AluSg SINE Alu 1 309 0 1613 161 65 17 chr5 183668476 183668767 -15961383 - AluJb SINE Alu -7 305 1 2255 111 3 0 chr5 183669405 183669703 -15960447 - AluSx SINE Alu -13 299 1 7571 13 5 6 chr5 183669906 183670767 -15959383 + L1PA3 LINE L1 5296 6155 0 333 0 0 0 chr5 183670837 183670874 -15959276 + (T)n Simple_repeat Simple_repeat 1 37 0 1944 103 13 17 chr5 183671240 183671542 -15958608 + HERVH LTR ERV1 7413 7713 0 1079 168 117 81 chr5 183671544 183671938 -15958212 + LTR7 LTR ERV1 3 410 -40 1668 133 0 4 chr5 183671942 183672182 -15957968 + AluSc SINE Alu 62 300 -9 322 287 185 14 chr5 183672761 183672977 -15957173 + MIR SINE MIR 10 262 0 2529 60 0 10 chr5 183673878 183674192 -15955958 - AluY SINE Alu 0 311 1 1626 197 10 3 chr5 183674233 183674522 -15955628 - AluJo SINE Alu -20 292 2 2597 42 0 26 chr5 183674801 183675112 -15955038 + AluY SINE Alu 1 303 -8 180 0 0 0 chr5 183675242 183675262 -15954888 + (TA)n Simple_repeat Simple_repeat 2 21 0 198 0 0 0 chr5 183675262 183675284 -15954866 + (T)n Simple_repeat Simple_repeat 1 22 0 1481 164 8 12 chr5 183676416 183676660 -15953490 + AluJb SINE Alu 44 286 -26 182 265 132 15 chr5 183676749 183676817 -15953333 - L2 LINE L2 -181 3091 3016 1690 253 56 70 chr5 183676822 183677249 -15952901 - MER20B DNA MER1_type -35 748 317 2145 109 3 3 chr5 183677249 183677534 -15952616 + AluSx SINE Alu 1 285 -27 221 56 0 28 chr5 183677534 183677570 -15952580 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 1690 253 56 70 chr5 183677570 183677832 -15952318 - MER20B DNA MER1_type -464 319 67 28 0 0 0 chr5 183678395 183678423 -15951727 + AT_rich Low_complexity Low_complexity 1 28 0 843 139 23 23 chr5 183678423 183678552 -15951598 - FLAM_C SINE Alu -4 129 1 1524 172 14 24 chr5 183679561 183679852 -15950298 + AluJo SINE Alu 5 292 -20 743 273 157 14 chr5 183680737 183681258 -15948892 - L1ME LINE L1 -437 5684 4944 787 123 26 13 chr5 183682196 183682350 -15947800 + Charlie5 DNA MER1_type 2469 2624 0 294 79 0 0 chr5 183683240 183683278 -15946872 - tRNA-Gly-GGA tRNA tRNA -37 38 1 207 100 0 0 chr5 183683620 183683650 -15946500 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 696 255 92 87 chr5 183683654 183684023 -15946127 - L2 LINE L2 -15 3298 2928 1098 177 56 17 chr5 183684705 183684937 -15945213 - L1MC1 LINE L1 0 6333 6093 30 0 0 0 chr5 183685042 183685072 -15945078 + AT_rich Low_complexity Low_complexity 1 30 0 1244 171 108 37 chr5 183685301 183685570 -15944580 - AluJo SINE Alu -24 288 1 2210 55 13 45 chr5 183685829 183686139 -15944011 + AluY SINE Alu 1 300 -11 750 197 0 0 chr5 183686347 183686474 -15943676 + FLAM_A SINE Alu 14 140 -2 1163 161 154 18 chr5 183688551 183688746 -15941404 + MER33 DNA MER1_type 1 249 -2336 2180 110 7 0 chr5 183688746 183689037 -15941113 + AluSx SINE Alu 1 293 -19 1163 161 154 18 chr5 183689037 183689126 -15941024 + MER33 DNA MER1_type 249 324 0 200 218 55 73 chr5 183693410 183693465 -15936685 + MIR SINE MIR 100 153 -55 1897 175 33 33 chr5 183693888 183694254 -15935896 - MER47A DNA MER2_type 0 366 1 1057 137 71 0 chr5 183694343 183694511 -15935639 + AluSg/x SINE Alu 104 283 -27 267 31 0 0 chr5 183694511 183694543 -15935607 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 328 235 0 15 chr5 183695860 183695928 -15934222 + L2 LINE L2 3157 3223 -49 1024 166 136 72 chr5 183696041 183696210 -15933940 - AluJo SINE Alu -10 302 108 305 24 24 0 chr5 183696210 183696252 -15933898 + (TG)n Simple_repeat Simple_repeat 2 44 0 1024 166 136 72 chr5 183696252 183696347 -15933803 - AluJo SINE Alu -204 108 21 590 88 12 0 chr5 183696347 183696427 -15933723 - L1MA1 LINE L1 -35 6267 6187 2065 146 0 0 chr5 183696887 183697181 -15932969 + AluSx SINE Alu 1 294 -18 2200 101 0 7 chr5 183697734 183698032 -15932118 + AluY SINE Alu 1 296 -15 886 177 133 124 chr5 183698061 183698155 -15931995 - MER2 DNA MER2_type -3 342 250 1358 150 44 0 chr5 183698155 183698382 -15931768 + L1PA13 LINE L1 5923 6159 -4 886 177 133 124 chr5 183698382 183698626 -15931524 - MER2 DNA MER2_type -95 250 1 1642 210 103 71 chr5 183698835 183700029 -15930121 - L1ME1 LINE L1 -4 6162 4939 216 0 0 0 chr5 183700029 183700053 -15930097 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1642 210 103 71 chr5 183700053 183700106 -15930044 - L1ME1 LINE L1 -1227 4939 4889 471 226 44 69 chr5 183700146 183700235 -15929915 + L1MA10 LINE L1 6180 6265 -69 1916 121 53 0 chr5 183700235 183700516 -15929634 - AluSx SINE Alu -16 296 1 471 226 44 69 chr5 183700516 183700585 -15929565 + L1MA10 LINE L1 6265 6334 0 1137 103 0 7 chr5 183700734 183700909 -15929241 - AluSx SINE Alu 0 302 129 4787 38 4 6 chr5 183700916 183701463 -15928687 - L1PA3 LINE L1 -5 6150 5605 10014 20 0 1 chr5 183701463 183702840 -15927310 + L1PA3 LINE L1 4235 5610 -545 1124 110 0 0 chr5 183702840 183702985 -15927165 - AluSx SINE Alu -167 145 1 1798 175 0 23 chr5 183703049 183703357 -15926793 - AluJb SINE Alu -11 301 1 821 160 0 8 chr5 183703364 183703489 -15926661 - FLAM_A SINE Alu -9 124 1 426 346 17 22 chr5 183703596 183703775 -15926375 - MIR3 SINE MIR -12 196 19 1635 181 29 0 chr5 183703843 183704120 -15926030 + AluJo SINE Alu 3 287 -25 782 218 0 0 chr5 183704282 183704415 -15925735 + AluJo/FLAM SINE Alu 1 133 -169 1958 145 10 3 chr5 183704417 183704720 -15925430 + AluSx SINE Alu 1 305 -7 338 238 114 19 chr5 183704729 183704834 -15925316 + MIR SINE MIR 46 160 -102 970 246 52 88 chr5 183704839 183705261 -15924889 + MLT1I LTR MaLR 3 409 0 670 226 28 42 chr5 183705561 183705778 -15924372 - L2 LINE L2 -2223 1091 878 1077 216 195 6 chr5 183706247 183706781 -15923369 + MER76 LTR ERV 3 670 -18 426 239 30 12 chr5 183707028 183707151 -15922999 - MER5B DNA MER1_type -1 177 61 360 284 23 68 chr5 183707159 183707335 -15922815 + MIR SINE MIR 57 224 -38 837 247 96 77 chr5 183707512 183707536 -15922614 + MER115 DNA AcHobo 29 51 -642 2168 114 3 3 chr5 183707536 183707835 -15922315 - AluSx SINE Alu -13 299 1 837 247 96 77 chr5 183707835 183707861 -15922289 + MER115 DNA AcHobo 51 75 -618 2495 83 3 0 chr5 183707861 183708173 -15921977 + AluSp SINE Alu 1 313 0 837 247 96 77 chr5 183708173 183708538 -15921612 + MER115 DNA AcHobo 75 453 -240 2179 109 0 13 chr5 183708684 183708988 -15921162 + AluSx SINE Alu 1 300 -12 193 229 0 0 chr5 183709025 183709060 -15921090 + MIR SINE MIR 220 254 -8 648 137 0 0 chr5 183709603 183709698 -15920452 - AluJb SINE Alu -5 307 213 530 92 0 0 chr5 183709695 183709760 -15920390 - AluJ/FRAM SINE Alu -32 280 216 * 806 111 8 16 chr5 183709760 183709886 -15920264 - AluSg/x SINE Alu -32 280 156 2038 131 3 16 chr5 183709915 183710221 -15919929 - AluSx SINE Alu -10 302 1 1461 194 47 77 chr5 183710408 183710809 -15919341 + MLT1B LTR MaLR 2 390 0 1544 150 113 0 chr5 183710955 183711221 -15918929 - AluSx SINE Alu -14 298 3 302 357 58 13 chr5 183711803 183711957 -15918193 + MIR SINE MIR 25 185 -77 1242 146 146 35 chr5 183712115 183712402 -15917748 + AluJo SINE Alu 1 315 0 328 296 80 31 chr5 183713036 183713198 -15916952 + MIR SINE MIR 20 189 -73 426 246 155 50 chr5 183713356 183713633 -15916517 + MLT1I LTR MaLR 89 394 -15 184 167 19 19 chr5 183714535 183714589 -15915561 + (CCG)n Simple_repeat Simple_repeat 3 56 0 323 272 128 14 chr5 183714643 183714972 -15915178 + L1M4 LINE L1 880 3307 -1231 465 243 5 53 chr5 183714976 183715165 -15914985 + GA-rich Low_complexity Low_complexity 1 180 0 293 160 64 24 chr5 183715287 183715412 -15914738 + C-rich Low_complexity Low_complexity 6 135 0 30 0 0 0 chr5 183715546 183715576 -15914574 + GC_rich Low_complexity Low_complexity 1 30 0 273 211 20 40 chr5 183715998 183716150 -15914000 + A-rich Low_complexity Low_complexity 5 153 0 180 0 0 0 chr5 183716349 183716369 -15913781 + (GA)n Simple_repeat Simple_repeat 1 20 0 181 148 0 0 chr5 183716390 183716417 -15913733 - L2 LINE L2 -16 3256 3230 1654 196 48 51 chr5 183716680 183717093 -15913057 + MLT2D LTR ERVL 1 412 -2 649 275 50 29 chr5 183717094 183717202 -15912948 - LTR16C LTR ERVL -27 464 360 1565 158 0 114 chr5 183717202 183717544 -15912606 + AluJo SINE Alu 3 305 -7 649 275 50 29 chr5 183717544 183717675 -15912475 - LTR16C LTR ERVL -131 360 220 303 30 0 88 chr5 183717692 183717727 -15912423 - MSTB2 LTR MaLR -32 425 389 1759 178 10 3 chr5 183717727 183718030 -15912120 - AluJo SINE Alu -7 305 1 303 30 0 88 chr5 183718030 183718048 -15912102 - MSTB2 LTR MaLR -68 389 347 770 193 0 15 chr5 183718081 183718216 -15911934 - FLAM_A SINE Alu 0 133 1 399 273 108 26 chr5 183718590 183718758 -15911392 - MLT1I LTR MaLR -8 426 252 327 205 63 62 chr5 183718818 183718955 -15911195 - AluJb SINE Alu -66 236 175 958 128 0 15 chr5 183719506 183719639 -15910511 + AluJ SINE Alu 1 131 -171 2568 64 0 3 chr5 183719643 183719955 -15910195 + AluY SINE Alu 1 311 0 315 0 0 0 chr5 183719962 183719997 -15910153 + (TA)n Simple_repeat Simple_repeat 1 35 0 430 183 45 0 chr5 183720227 183720336 -15909814 - L1MA4A LINE L1 0 6279 6044 * 473 163 12 0 chr5 183720325 183720411 -15909739 - L1MA4A LINE L1 -181 6122 6036 1897 130 45 3 chr5 183720411 183720580 -15909570 - AluSx SINE Alu -8 304 117 639 0 0 0 chr5 183720580 183720651 -15909499 + (TG)n Simple_repeat Simple_repeat 2 72 0 1897 130 45 3 chr5 183720651 183720773 -15909377 - AluSx SINE Alu -195 117 1 23 68 0 0 chr5 183721081 183721125 -15909025 + AT_rich Low_complexity Low_complexity 1 44 0 1330 122 0 16 chr5 183721534 183721723 -15908427 + AluJ SINE Alu 107 292 -20 604 107 0 0 chr5 183721726 183721810 -15908340 - L1MA4A LINE L1 -359 5941 5858 1038 96 27 34 chr5 183721997 183722143 -15908007 + AluSq/x SINE Alu 1 145 -168 717 178 0 8 chr5 183722144 183722262 -15907888 - AluJb SINE Alu -40 272 156 593 239 202 33 chr5 183722447 183722719 -15907431 - L1M1 LINE L1 -4457 1925 1565 277 206 159 0 chr5 183722996 183723059 -15907091 + HsTC2 DNA Tc2 3 75 -1823 992 212 157 25 chr5 183723105 183723468 -15906682 + HsTC2 DNA Tc2 1299 1885 -13 2358 83 0 16 chr5 183723586 183723899 -15906251 - AluSc SINE Alu 0 309 2 617 214 13 84 chr5 183724075 183724152 -15905998 + FRAM SINE Alu 16 78 -234 2295 104 0 7 chr5 183724152 183724459 -15905691 + AluSx SINE Alu 1 305 -7 617 214 13 84 chr5 183724459 183724535 -15905615 + FRAM SINE Alu 78 158 -18 2257 105 3 0 chr5 183724765 183725069 -15905081 - AluSp SINE Alu -8 305 1 228 260 0 0 chr5 183725539 183725589 -15904561 + MLT1L LTR MaLR 126 175 -440 183 250 52 83 chr5 183725751 183725847 -15904303 + L3 LINE CR1 180 272 -1305 * 217 151 57 75 chr5 183725835 183725888 -15904262 + MIR SINE MIR 93 144 -118 904 178 6 52 chr5 183727223 183727397 -15902753 + FRAM SINE Alu 1 166 0 2282 107 0 0 chr5 183728030 183728339 -15901811 + AluSx SINE Alu 1 309 -3 436 224 0 13 chr5 183728349 183728425 -15901725 + FLAM_A SINE Alu 1 75 -57 510 311 87 47 chr5 183729203 183729628 -15900522 + L1ME3 LINE L1 463 904 -5626 596 158 50 10 chr5 183730034 183730135 -15900015 + FLAM_A SINE Alu 12 116 -26 2035 193 27 87 chr5 183730293 183730924 -15899226 + L1MC4a LINE L1 7211 7803 -5 681 243 59 122 chr5 183731015 183731735 -15898415 + L1ME3 LINE L1 1408 2141 -4548 186 43 0 0 chr5 183731755 183731778 -15898372 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1910 197 95 77 chr5 183731778 183731854 -15898296 + L1ME3 LINE L1 5716 5789 -767 1986 153 3 0 chr5 183731854 183732149 -15898001 + AluSx SINE Alu 1 296 -16 1910 197 95 77 chr5 183732149 183732168 -15897982 + L1ME3 LINE L1 5789 5806 -750 1970 74 0 48 chr5 183732168 183732438 -15897712 + AluY SINE Alu 54 310 -1 1910 197 95 77 chr5 183732438 183732561 -15897589 + L1ME3 LINE L1 5806 5925 -631 3371 74 35 5 chr5 183732561 183732992 -15897158 + MLT2A1 LTR ERVL 1 444 0 1910 197 95 77 chr5 183732992 183733322 -15896828 + L1ME3 LINE L1 5925 6340 -216 1802 156 52 0 chr5 183733322 183733611 -15896539 + AluJb SINE Alu 1 304 -8 1910 197 95 77 chr5 183733611 183733797 -15896353 + L1ME3 LINE L1 6340 6521 -35 1556 125 114 18 chr5 183733948 183734229 -15895921 + MSTA LTR MaLR 88 395 -33 25 0 0 0 chr5 183734257 183734282 -15895868 + AT_rich Low_complexity Low_complexity 1 25 0 220 250 78 16 chr5 183735393 183735457 -15894693 - MER5B DNA MER1_type 0 178 111 1674 190 3 7 chr5 183735488 183735783 -15894367 - AluJo SINE Alu -16 296 3 246 128 0 0 chr5 183735795 183735834 -15894316 + (A)n Simple_repeat Simple_repeat 1 39 0 197 245 19 19 chr5 183735840 183735893 -15894257 + MER5A DNA MER1_type 70 122 -67 301 307 36 21 chr5 183736423 183736563 -15893587 + MER5B DNA MER1_type 2 143 -35 21 57 0 0 chr5 183736710 183736745 -15893405 + AT_rich Low_complexity Low_complexity 1 35 0 2366 89 7 0 chr5 183736828 183737132 -15893018 - AluY SINE Alu -5 306 1 26 0 0 0 chr5 183737133 183737159 -15892991 + AT_rich Low_complexity Low_complexity 1 26 0 1285 194 74 28 chr5 183737435 183737718 -15892432 - AluJb SINE Alu -16 296 1 284 355 58 0 chr5 183737797 183737918 -15892232 + Tigger8 DNA MER2_type 25 152 -514 366 259 121 58 chr5 183738087 183738434 -15891716 + Tigger8 DNA MER2_type 239 607 -59 899 158 0 0 chr5 183739749 183739882 -15890268 - FLAM_C SINE Alu 0 133 1 359 229 137 30 chr5 183740168 183740299 -15889851 - MIR SINE MIR -1 261 117 609 234 31 8 chr5 183740314 183740442 -15889708 + MIR SINE MIR 2 132 -130 1447 164 13 76 chr5 183740466 183740636 -15889514 - AluJb SINE Alu -15 297 118 2473 55 3 0 chr5 183740636 183740928 -15889222 - AluY SINE Alu -17 294 2 2284 96 7 3 chr5 183740929 183741230 -15888920 - AluSc SINE Alu -7 302 1 1447 164 13 76 chr5 183741230 183741374 -15888776 - AluJb SINE Alu -193 119 1 1419 174 82 48 chr5 183741392 183741685 -15888465 - AluJo SINE Alu -9 303 1 1440 211 120 99 chr5 183741713 183742632 -15887518 + L1MC5 LINE L1 6685 7584 -377 1985 132 0 0 chr5 183742632 183742905 -15887245 + AluSx SINE Alu 31 303 -9 1440 211 120 99 chr5 183742905 183742963 -15887187 + L1MC5 LINE L1 7584 7639 -322 833 160 24 0 chr5 183742963 183743088 -15887062 + FLAM_C SINE Alu 1 128 -5 216 0 0 0 chr5 183743088 183743112 -15887038 + (TA)n Simple_repeat Simple_repeat 2 25 0 1440 211 120 99 chr5 183743112 183743348 -15886802 + L1MC5 LINE L1 7638 7925 -36 23 78 0 0 chr5 183743550 183743601 -15886549 + AT_rich Low_complexity Low_complexity 1 51 0 2160 75 0 0 chr5 183743729 183743995 -15886155 - AluSx SINE Alu -8 304 39 324 348 97 15 chr5 183744099 183744366 -15885784 - L1M4 LINE L1 -1296 4850 4562 235 298 12 0 chr5 183744436 183744520 -15885630 - L1M4 LINE L1 -1699 4447 4363 21 0 0 0 chr5 183744886 183744907 -15885243 + AT_rich Low_complexity Low_complexity 1 21 0 2238 95 3 49 chr5 183745241 183745568 -15884582 - AluSx SINE Alu 0 312 1 21 36 0 0 chr5 183746068 183746096 -15884054 + AT_rich Low_complexity Low_complexity 1 28 0 1795 168 27 7 chr5 183746140 183746438 -15883712 - AluJb SINE Alu -8 304 1 28 29 0 0 chr5 183746445 183746480 -15883670 + AT_rich Low_complexity Low_complexity 1 35 0 1768 177 0 23 chr5 183746490 183746789 -15883361 - AluJb SINE Alu -20 292 1 21 82 0 0 chr5 183746950 183746999 -15883151 + AT_rich Low_complexity Low_complexity 1 49 0 1801 174 0 31 chr5 183747206 183747528 -15882622 - AluJo SINE Alu 0 312 1 739 163 70 0 chr5 183747812 183747941 -15882209 + MSTA LTR MaLR 244 381 -47 21 36 0 0 chr5 183748262 183748290 -15881860 + AT_rich Low_complexity Low_complexity 1 28 0 396 312 80 14 chr5 183748370 183748508 -15881642 + L2 LINE L2 3123 3269 -3 328 235 33 189 chr5 183748672 183748690 -15881460 + L2 LINE L2 2526 2545 -769 2269 85 0 7 chr5 183748690 183748983 -15881167 + AluY SINE Alu 1 291 -20 328 235 33 189 chr5 183748983 183749079 -15881071 + L2 LINE L2 2545 2654 -660 2239 101 3 3 chr5 183749079 183749375 -15880775 - AluSg SINE Alu -14 296 1 328 235 33 189 chr5 183749375 183749489 -15880661 + L2 LINE L2 2654 2680 -634 784 172 0 0 chr5 183749489 183749605 -15880545 - FLAM_C SINE Alu -15 118 3 328 235 33 189 chr5 183749605 183749740 -15880410 + L2 LINE L2 2680 2834 -480 182 227 30 61 chr5 183749867 183749933 -15880217 - MER5B DNA MER1_type -114 64 1 1108 213 0 0 chr5 183750598 183750772 -15879378 - FAM SINE Alu 0 175 2 401 252 16 37 chr5 183751213 183751355 -15878795 - MIR SINE MIR -62 146 22 1186 56 7 0 chr5 183751818 183751962 -15878188 - AluSg/x SINE Alu -9 303 159 220 306 102 28 chr5 183753398 183753506 -15876644 + L2 LINE L2 3137 3252 -20 180 0 0 0 chr5 183753506 183753526 -15876624 + (A)n Simple_repeat Simple_repeat 1 20 0 303 265 127 31 chr5 183753729 183753922 -15876228 - MIR SINE MIR -56 206 2 740 181 29 82 chr5 183754088 183754259 -15875891 - FRAM SINE Alu -14 162 1 2129 131 0 16 chr5 183754304 183754618 -15875532 - AluSx SINE Alu -3 309 1 383 93 0 0 chr5 183755033 183755087 -15875063 + FRAM/FAM SINE Alu 28 81 -94 2348 97 3 0 chr5 183755361 183755660 -15874490 + AluSp SINE Alu 3 302 -11 1478 198 19 23 chr5 183756153 183756461 -15873689 + AluJo SINE Alu 2 308 -4 2165 137 0 0 chr5 183757045 183757351 -15872799 + AluSx SINE Alu 1 306 -6 2189 76 0 23 chr5 183758091 183758392 -15871758 - AluY SINE Alu -17 294 1 593 248 224 12 chr5 183759318 183759568 -15870582 - L2 LINE L2 0 3313 3011 955 137 25 6 chr5 183759574 183759735 -15870415 - L1MA9 LINE L1 0 6312 6149 208 206 0 0 chr5 183759736 183759770 -15870380 + (CG)n Simple_repeat Simple_repeat 2 35 0 1077 169 20 10 chr5 183759793 183759988 -15870162 + AluJo SINE Alu 86 282 -30 1678 157 21 0 chr5 183760042 183760329 -15869821 - L1MA9 LINE L1 -237 6075 5783 259 267 0 53 chr5 183760354 183760429 -15869721 + L2 LINE L2 3191 3261 -52 686 246 40 48 chr5 183760436 183760518 -15869632 - Charlie2a DNA MER1_type -7 2855 2774 1969 165 0 3 chr5 183760518 183760827 -15869323 + AluJb SINE Alu 1 308 -4 686 246 40 48 chr5 183760827 183761088 -15869062 - Charlie2a DNA MER1_type -88 2774 1473 653 112 0 31 chr5 183761150 183761248 -15868902 - Tigger7 DNA MER2_type -4 2483 2389 * 896 230 16 5 chr5 183761246 183761437 -15868713 - Tigger7 DNA MER2_type -2220 267 75 3219 157 82 32 chr5 183761522 183762183 -15867967 + LTR8A LTR ERV1 34 727 0 1959 14 0 0 chr5 183762374 183762584 -15867566 + L1PA5 LINE L1 5939 6148 -6 342 195 316 47 chr5 183762633 183762687 -15867463 - Charlie2 DNA MER1_type -2465 317 279 2961 145 11 11 chr5 183762687 183763135 -15867015 + MER83 LTR ERV1 1 448 0 342 195 316 47 chr5 183763135 183763295 -15866855 - Charlie2 DNA MER1_type -2503 279 45 1499 120 24 72 chr5 183763481 183763772 -15866378 - LTR23 LTR ERV1 0 437 161 552 208 77 0 chr5 183763847 183763977 -15866173 - LTR23 LTR ERV1 -289 148 9 187 286 18 0 chr5 183763981 183764037 -15866113 + L2 LINE L2 3216 3272 0 * 195 231 96 0 chr5 183764033 183764085 -15866065 - L2 LINE L2 -338 2976 2920 468 205 0 0 chr5 183764099 183764177 -15865973 + Tigger3(Golem) DNA MER2_type 28 105 -2924 3971 117 73 40 chr5 183764181 183764437 -15865713 + Tigger3(Golem) DNA MER2_type 2285 2531 -498 585 153 105 32 chr5 183764437 183764561 -15865589 - FLAM_C SINE Alu 0 133 1 3971 117 73 40 chr5 183764561 183764745 -15865405 + Tigger3(Golem) DNA MER2_type 2531 2707 -322 2285 100 0 10 chr5 183764745 183765054 -15865096 - AluSx SINE Alu -6 306 1 3971 117 73 40 chr5 183765054 183765333 -15864817 + Tigger3(Golem) DNA MER2_type 2707 3029 0 2475 64 3 0 chr5 183765349 183765647 -15864503 + AluY SINE Alu 1 299 -12 1473 185 164 56 chr5 183765718 183766277 -15863873 + LTR29 LTR ERV1 1 652 -1 186 303 13 40 chr5 183766284 183766360 -15863790 - L2 LINE L2 -518 2796 2723 2557 48 0 0 chr5 183766383 183766677 -15863473 + AluY SINE Alu 1 294 -17 1593 106 73 73 chr5 183766683 183766803 -15863347 + MLT1B LTR MaLR 1 120 -270 2221 132 0 0 chr5 183766803 183767106 -15863044 + AluSx SINE Alu 1 303 -9 1593 106 73 73 chr5 183767106 183767286 -15862864 + MLT1B LTR MaLR 119 301 -89 214 367 144 7 chr5 183767286 183767425 -15862725 - L2 LINE L2 -698 2616 2459 2204 99 10 0 chr5 183767431 183767723 -15862427 + AluSg SINE Alu 1 295 -15 3838 163 62 14 chr5 183767725 183768413 -15861737 - MER72 LTR ERV1 -1 721 1 415 188 30 83 chr5 183768640 183768773 -15861377 + HAL1b LINE L1 750 875 -473 2280 114 0 3 chr5 183768829 183769137 -15861013 - AluSx SINE Alu -5 307 1 2004 132 3 22 chr5 183769150 183769468 -15860682 - AluSx SINE Alu 0 312 1 2132 167 58 74 chr5 183769601 183770117 -15860033 - LTR54 LTR ERV1 0 510 3 825 95 0 0 chr5 183770219 183770324 -15859826 - AluSg/x SINE Alu -27 283 179 259 135 169 34 chr5 183770533 183770622 -15859528 + MER113 DNA MER1_type? 33 133 -388 409 278 74 17 chr5 183770911 183771087 -15859063 - L2 LINE L2 0 3313 3128 2200 132 3 0 chr5 183771204 183771507 -15858643 + AluSx SINE Alu 1 304 -8 302 286 158 0 chr5 183771897 183772068 -15858082 + L1MC/D LINE L1 5637 5834 -1974 569 127 0 0 chr5 183772092 183772171 -15857979 - AluSg/x SINE Alu -16 294 216 214 241 118 84 chr5 183772537 183772740 -15857410 - L2 LINE L2 -222 3050 2841 217 380 19 9 chr5 183773033 183773141 -15857009 + MIR SINE MIR 21 129 -133 267 234 16 172 chr5 183774494 183774623 -15855527 - MER5A DNA MER1_type 0 189 41 2073 99 45 0 chr5 183774623 183774915 -15855235 - AluSp SINE Alu -3 310 6 267 234 16 172 chr5 183774915 183774927 -15855223 - MER5A DNA MER1_type -148 41 82 1744 60 56 0 chr5 183774927 183775142 -15855008 - AluY SINE Alu -8 303 77 267 234 16 172 chr5 183775142 183775191 -15854959 - MER5A DNA MER1_type -106 83 28 205 118 39 0 chr5 183776236 183776287 -15853863 + T-rich Low_complexity Low_complexity 2 54 0 1069 170 31 54 chr5 183776547 183776771 -15853379 - MER20 DNA MER1_type 0 219 1 346 298 76 23 chr5 183777895 183778066 -15852084 - MIR SINE MIR -74 188 9 2358 57 10 0 chr5 183778193 183778492 -15851658 - AluY SINE Alu -9 302 1 2168 188 36 55 chr5 183779172 183779614 -15850536 + LTR55 LTR ERV 23 455 -93 1822 152 10 3 chr5 183779614 183779923 -15850227 + AluJb SINE Alu 1 311 -1 2168 188 36 55 chr5 183779923 183780008 -15850142 + LTR55 LTR ERV 455 540 -8 417 245 197 32 chr5 183780908 183781096 -15849054 - MIR SINE MIR -11 251 33 1601 271 87 20 chr5 183781271 183781820 -15848330 + MLT1K LTR MaLR 3 588 0 355 237 26 0 chr5 183781878 183781954 -15848196 + MLT1E1 LTR MaLR 1 78 -576 233 146 0 49 chr5 183781956 183781997 -15848153 + MLT1E LTR MaLR 185 223 -401 * 1234 242 86 44 chr5 183781992 183782376 -15847774 + MLT1E LTR MaLR 194 593 0 406 268 30 42 chr5 183782899 183783067 -15847083 + MER5A DNA MER1_type 1 166 -23 2322 72 16 0 chr5 183783390 183783695 -15846455 - AluSp SINE Alu -3 310 1 2078 112 0 10 chr5 183784123 183784426 -15845724 - AluSx SINE Alu -12 300 1 397 291 82 25 chr5 183785043 183785239 -15844911 - MIR SINE MIR -40 222 16 240 181 405 26 chr5 183785861 183785977 -15844173 - MIR SINE MIR 0 262 103 1180 154 4 41 chr5 183786078 183786345 -15843805 - AluJb SINE Alu -55 257 1 221 286 52 26 chr5 183786576 183786653 -15843497 - MIR SINE MIR -108 154 76 419 299 46 19 chr5 183786967 183787125 -15843025 + MIR SINE MIR 24 189 -62 411 237 25 116 chr5 183787173 183787371 -15842779 + LTR67 LTR ERVL 30 209 -348 240 184 0 0 chr5 183787743 183787781 -15842369 + LTR67 LTR ERVL 520 557 0 198 0 0 0 chr5 183788119 183788141 -15842009 + (A)n Simple_repeat Simple_repeat 1 22 0 1950 125 14 3 chr5 183788641 183788929 -15841221 - AluSq SINE Alu -20 293 3 1738 166 0 14 chr5 183788968 183789264 -15840886 - AluJo SINE Alu -20 292 1 305 252 205 20 chr5 183789547 183789698 -15840452 - MIR SINE MIR -36 226 48 559 285 22 7 chr5 183790804 183790941 -15839209 - MIR SINE MIR -93 169 31 279 114 0 0 chr5 183791230 183791274 -15838876 + (TCC)n Simple_repeat Simple_repeat 2 45 0 2181 88 0 0 chr5 183791446 183791730 -15838420 + AluSq SINE Alu 14 297 -16 1210 234 44 55 chr5 183791745 183792038 -15838112 - L1ME2 LINE L1 -44 6120 5834 1883 132 10 7 chr5 183792038 183792334 -15837816 - AluJo SINE Alu -13 299 3 1210 234 44 55 chr5 183792334 183792445 -15837705 - L1ME2 LINE L1 -330 5834 5723 399 145 0 0 chr5 183792461 183792530 -15837620 + (GGA)n Simple_repeat Simple_repeat 2 70 0 483 220 9 0 chr5 183792536 183792645 -15837505 - L1ME2 LINE L1 -408 5756 5647 1633 176 73 43 chr5 183792645 183793015 -15837135 - MLT1B LTR MaLR -9 381 1 1615 208 70 70 chr5 183793018 183793073 -15837077 - L1ME2 LINE L1 -533 5633 5580 2099 123 0 0 chr5 183793073 183793375 -15836775 + AluSx SINE Alu 1 302 -10 1615 208 70 70 chr5 183793375 183793539 -15836611 - L1ME2 LINE L1 -586 5580 5418 1548 174 16 35 chr5 183793539 183793856 -15836294 - AluJo SINE Alu -1 311 1 1615 208 70 70 chr5 183793856 183793957 -15836193 - L1ME2 LINE L1 -748 5418 5319 1950 120 9 29 chr5 183793957 183794273 -15835877 + AluSq SINE Alu 1 310 -3 1615 208 70 70 chr5 183794273 183794596 -15835554 - L1ME2 LINE L1 -847 5319 4986 2153 104 0 3 chr5 183794596 183794894 -15835256 - AluSg SINE Alu -13 297 1 1615 208 70 70 chr5 183794894 183794988 -15835162 - L1ME2 LINE L1 -1180 4986 4894 2168 93 10 7 chr5 183795408 183795709 -15834441 + AluSp SINE Alu 4 305 -8 249 290 84 8 chr5 183795844 183795975 -15834175 - MIR SINE MIR -112 150 10 326 236 141 52 chr5 183796065 183796256 -15833894 + L1ME3A LINE L1 5413 5620 -2375 419 303 50 36 chr5 183796288 183796360 -15833790 + L1ME LINE L1 5492 5562 -559 2290 83 0 3 chr5 183796360 183796662 -15833488 + AluY SINE Alu 1 301 -10 419 303 50 36 chr5 183796662 183796810 -15833340 + L1ME LINE L1 5562 5715 -406 325 221 0 31 chr5 183797395 183797522 -15832628 + GA-rich Low_complexity Low_complexity 2 124 0 1521 228 15 3 chr5 183797631 183797964 -15832186 + MER58B DNA MER1_type 1 337 -4 377 316 7 39 chr5 183798034 183798189 -15831961 - MIR SINE MIR 0 262 113 308 241 0 69 chr5 183798191 183798278 -15831872 - MER5B DNA MER1_type -2 176 96 327 260 112 41 chr5 183798465 183798634 -15831516 - MIR SINE MIR 0 262 82 541 207 64 0 chr5 183798640 183798780 -15831370 + L1ME3A LINE L1 6022 6170 0 907 179 51 106 chr5 183798885 183799159 -15830991 - MER113 DNA MER1_type? -71 450 192 986 256 73 70 chr5 183799164 183799562 -15830588 + MLT1J LTR MaLR 9 407 -104 2268 94 0 7 chr5 183799564 183799872 -15830278 - AluSx SINE Alu -6 306 1 411 61 0 0 chr5 183799915 183799964 -15830186 - AluSg/x SINE Alu -105 205 157 1955 116 45 0 chr5 183799964 183800256 -15829894 - AluSg SINE Alu -5 305 1 181 316 26 0 chr5 183800736 183800812 -15829338 + L2 LINE L2 2635 2712 -602 283 250 42 42 chr5 183800849 183800945 -15829205 - MIR3 SINE MIR -27 181 86 220 148 19 111 chr5 183801218 183801272 -15828878 - L2 LINE L2 -209 3063 3015 454 255 176 0 chr5 183801294 183801447 -15828703 + MIR SINE MIR 81 260 -2 442 325 19 34 chr5 183801567 183801773 -15828377 - MIR SINE MIR -6 256 54 219 294 71 12 chr5 183801801 183801886 -15828264 + MIR SINE MIR 36 125 -83 204 40 0 0 chr5 183801938 183801963 -15828187 + (ATG)n Simple_repeat Simple_repeat 3 27 0 2055 137 0 3 chr5 183802422 183802735 -15827415 - AluSx SINE Alu 0 312 1 22 35 0 0 chr5 183802807 183802836 -15827314 + AT_rich Low_complexity Low_complexity 1 29 0 844 147 0 0 chr5 183802836 183802965 -15827185 - FLAM_C SINE Alu 0 133 5 187 245 19 19 chr5 183802988 183803041 -15827109 - MIR SINE MIR -63 145 93 209 195 0 0 chr5 183803769 183803810 -15826340 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 1648 189 25 28 chr5 183803843 183804202 -15825948 - L1MB2 LINE L1 0 6171 5814 621 153 10 0 chr5 183804213 183804311 -15825839 - FRAM SINE Alu -25 151 53 2741 178 8 36 chr5 183804311 183804473 -15825677 - L1MB2 LINE L1 -350 5821 5656 2140 88 3 3 chr5 183804473 183804800 -15825350 + AluSp SINE Alu 1 327 0 2741 178 8 36 chr5 183804800 183805210 -15824940 - L1MB2 LINE L1 -515 5656 5268 1013 283 7 34 chr5 183805339 183805636 -15824514 + L1MC/D LINE L1 5433 5721 -2087 2920 83 18 0 chr5 183808836 183809220 -15820930 - Tigger1 DNA MER2_type -899 1519 1129 259 135 48 29 chr5 183809220 183809324 -15820826 + (TA)n Simple_repeat Simple_repeat 2 107 0 2361 164 17 5 chr5 183809330 183809752 -15820398 - L1MD1 LINE L1 -311 5931 5505 1068 235 97 65 chr5 183810041 183810431 -15819719 + L2 LINE L2 2726 3151 -162 700 216 41 6 chr5 183810431 183810602 -15819548 + MER104 DNA MER2_type 1 177 -3 1068 235 97 65 chr5 183810602 183810771 -15819379 + L2 LINE L2 3151 3313 0 279 246 198 8 chr5 183811126 183811252 -15818898 - MIR SINE MIR -11 251 102 2699 69 0 20 chr5 183811351 183811700 -15818450 + THE1C LTR MaLR 34 375 0 309 266 49 53 chr5 183812001 183812179 -15817971 - HAL1 LINE L1 -1 6053 2334 720 175 66 38 chr5 183812231 183812414 -15817736 - L1MC4a LINE L1 -1847 5961 5774 266 123 0 35 chr5 183812532 183812589 -15817561 + AluJ/FRAM SINE Alu 227 281 -21 531 285 138 68 chr5 183812686 183813134 -15817016 - L2 LINE L2 -95 3218 2706 970 152 30 5 chr5 183813134 183813332 -15816818 - L1MB3 LINE L1 -1 6182 5980 531 285 138 68 chr5 183813332 183813514 -15816636 - L2 LINE L2 -607 2706 2538 1255 103 6 6 chr5 183813986 183814160 -15815990 + AluSq SINE Alu 1 174 -139 1122 260 281 23 chr5 183814283 183814845 -15815305 - L2 LINE L2 -1601 1713 1007 419 299 189 1 chr5 183815054 183815237 -15814913 + MIR SINE MIR 20 233 -29 604 222 86 65 chr5 183815679 183815870 -15814280 + MIR SINE MIR 1 191 -71 1832 128 28 7 chr5 183815870 183816159 -15813991 + AluSq SINE Alu 1 295 -18 604 222 86 65 chr5 183816159 183816202 -15813948 + MIR SINE MIR 191 232 -30 615 215 136 0 chr5 183816349 183816502 -15813648 + MER5A DNA MER1_type 4 180 -9 281 269 96 53 chr5 183816444 183816652 -15813498 - MIR SINE MIR 0 262 46 * 284 313 10 0 chr5 183816977 183817076 -15813074 + L2 LINE L2 3172 3271 -1 409 152 0 38 chr5 183817231 183817310 -15812840 + AluS SINE Alu 228 303 -9 512 286 48 0 chr5 183817447 183817653 -15812497 + L1ME LINE L1 5478 5693 -428 787 227 37 0 chr5 183817691 183817854 -15812296 - MIR SINE MIR -23 239 71 323 271 0 19 chr5 183818291 183818398 -15811752 + Charlie8 DNA MER1_type 72 176 -2241 264 277 15 0 chr5 183818432 183818497 -15811653 + Charlie8 DNA MER1_type 1361 1426 -991 187 327 100 18 chr5 183818569 183818679 -15811471 + MIR3 SINE MIR 37 155 -53 2219 109 0 3 chr5 183818809 183819122 -15811028 - AluSx SINE Alu 0 312 1 743 284 71 40 chr5 183819840 183820180 -15809970 - L1MC/D LINE L1 -395 5775 5474 608 251 22 77 chr5 183820196 183820379 -15809771 + MER5B DNA MER1_type 1 173 -5 659 226 58 19 chr5 183820379 183820534 -15809616 + MER5B DNA MER1_type 14 174 -4 238 209 23 0 chr5 183820906 183820949 -15809201 - MER5B DNA MER1_type -3 175 132 553 261 47 14 chr5 183821037 183821072 -15809078 - L1MB1 LINE L1 -184 5984 5950 1904 205 83 15 chr5 183821072 183821551 -15808599 - L1ME2 LINE L1 -218 5946 5435 971 153 112 102 chr5 183821554 183821848 -15808302 - AluJo SINE Alu -10 302 6 1684 191 24 20 chr5 183821853 183822262 -15807888 - L1ME2 LINE L1 -845 5301 4891 201 256 0 0 chr5 183822265 183822304 -15807846 - MER5B DNA MER1_type -113 65 27 2278 100 0 0 chr5 183822315 183822614 -15807536 + AluSp SINE Alu 1 299 -14 390 313 88 45 chr5 183823161 183823557 -15806593 + L1ME LINE L1 5378 5790 -331 6152 164 18 9 chr5 183823587 183825611 -15804539 - L1PA16 LINE L1 -10 6156 4115 2062 123 7 0 chr5 183825661 183825963 -15804187 + AluSx SINE Alu 1 304 -8 2205 107 3 0 chr5 183826139 183826449 -15803701 + AluSx SINE Alu 1 311 -1 3137 272 93 32 chr5 183826460 183827900 -15802250 + L2 LINE L2 1783 3313 0 2400 83 3 3 chr5 183827963 183828263 -15801887 - AluY SINE Alu -10 301 2 782 191 0 0 chr5 183828293 183828424 -15801726 - FLAM_A SINE Alu 0 133 3 200 254 90 15 chr5 183829137 183829204 -15800946 - L2 LINE L2 -29 3243 3172 413 277 103 31 chr5 183829342 183829537 -15800613 + MIR SINE MIR 52 260 -2 399 21 0 0 chr5 183829940 183829988 -15800162 + (CA)n Simple_repeat Simple_repeat 2 49 0 204 40 0 0 chr5 183829987 183830012 -15800138 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 246 299 0 0 chr5 183830130 183830197 -15799953 + (CATATA)n Simple_repeat Simple_repeat 3 69 0 360 243 36 9 chr5 183830814 183830925 -15799225 + MIR SINE MIR 34 147 -61 184 171 57 0 chr5 183831794 183831829 -15798321 + L2 LINE L2 3264 3300 -13 2251 122 10 0 chr5 183831836 183832139 -15798011 + AluSq SINE Alu 1 306 -7 1028 166 0 0 chr5 183832462 183832619 -15797531 + FRAM SINE Alu 1 151 -25 491 284 60 11 chr5 183832673 183832856 -15797294 + MIR SINE MIR 71 262 0 328 286 109 8 chr5 183832849 183832968 -15797182 - MIR SINE MIR -108 154 24 * 252 217 48 24 chr5 183833649 183833732 -15796418 + L2 LINE L2 3229 3313 0 1288 104 0 0 chr5 183833778 183833942 -15796208 + AluSp SINE Alu 137 300 -13 21 0 0 0 chr5 183834159 183834180 -15795970 + AT_rich Low_complexity Low_complexity 1 21 0 2351 30 44 0 chr5 183834413 183834712 -15795438 + AluYa5 SINE Alu 1 311 0 2271 95 48 0 chr5 183834935 183835229 -15794921 + AluSq SINE Alu 1 308 -5 209 184 0 0 chr5 183835821 183835859 -15794291 + (CA)n Simple_repeat Simple_repeat 2 39 0 434 320 72 10 chr5 183837807 183838001 -15792149 + MIR SINE MIR 51 256 -6 456 239 35 14 chr5 183838135 183838277 -15791873 + MIR SINE MIR 12 156 -106 235 228 190 0 chr5 183838346 183838425 -15791725 - MIR SINE MIR -95 167 74 2271 114 0 3 chr5 183838484 183838790 -15791360 - AluSx SINE Alu -7 305 1 723 203 0 7 chr5 183839572 183839720 -15790430 + MIR SINE MIR 15 161 -101 407 224 17 52 chr5 183839706 183839822 -15790328 - MIR SINE MIR 0 262 151 * 270 272 130 11 chr5 183839825 183839917 -15790233 + MIR SINE MIR 157 259 -3 2381 100 0 3 chr5 183839919 183840230 -15789920 - AluSq SINE Alu -1 312 3 261 293 121 0 chr5 183840275 183840374 -15789776 - MIR3 SINE MIR -15 193 83 246 323 98 18 chr5 183840815 183840979 -15789171 + MIR SINE MIR 56 232 -30 195 247 114 108 chr5 183841306 183841472 -15788678 + MIR3 SINE MIR 19 185 -23 238 254 60 0 chr5 183841579 183841646 -15788504 - MIR SINE MIR -75 187 117 180 111 0 0 chr5 183841647 183841674 -15788476 + (TAA)n Simple_repeat Simple_repeat 1 27 0 188 276 0 17 chr5 183841674 183841732 -15788418 - MIR SINE MIR -6 256 200 472 250 43 14 chr5 183841735 183841875 -15788275 + HsTC2 DNA Tc2 1 144 -1754 1497 224 82 36 chr5 183841881 183842496 -15787654 + HsTC2 DNA Tc2 1267 1880 -18 1200 209 34 92 chr5 183842496 183842679 -15787471 + L1ME1 LINE L1 5708 5900 -266 1690 171 14 7 chr5 183842679 183842959 -15787191 + AluJb SINE Alu 1 282 -30 342 0 0 0 chr5 183842961 183842999 -15787151 + (CA)n Simple_repeat Simple_repeat 2 39 0 1200 209 34 92 chr5 183842999 183843223 -15786927 + L1ME1 LINE L1 5901 6094 -72 514 219 94 8 chr5 183843352 183843480 -15786670 - MIR SINE MIR -61 201 63 223 308 128 15 chr5 183843484 183843617 -15786533 + MIR3 SINE MIR 52 199 -9 414 0 0 0 chr5 183844538 183844584 -15785566 + (CA)n Simple_repeat Simple_repeat 1 46 0 270 0 0 0 chr5 183844699 183844729 -15785421 + (TG)n Simple_repeat Simple_repeat 2 31 0 234 237 0 0 chr5 183846075 183846151 -15783999 + CT-rich Low_complexity Low_complexity 1 76 0 251 356 118 39 chr5 183846336 183846513 -15783637 + L2 LINE L2 2847 3009 -263 2483 91 0 0 chr5 183846513 183846821 -15783329 - AluSq SINE Alu -5 308 1 251 356 118 39 chr5 183846821 183847033 -15783117 + L2 LINE L2 3009 3267 -5 2389 106 0 0 chr5 183847682 183847993 -15782157 + AluSx SINE Alu 1 311 -1 186 343 38 0 chr5 183848292 183848397 -15781753 - MIR3 SINE MIR -35 173 65 750 219 28 131 chr5 183849014 183849148 -15781002 - MIR SINE MIR 0 262 171 2253 128 0 0 chr5 183849148 183849445 -15780705 + AluSx SINE Alu 1 297 -15 750 219 28 131 chr5 183849445 183849593 -15780557 - MIR SINE MIR -91 171 9 216 227 0 0 chr5 183849780 183849841 -15780309 - MIR SINE MIR -44 164 103 789 288 7 32 chr5 183850628 183850870 -15779280 - MER113 DNA MER1_type? -32 489 253 2367 91 7 3 chr5 183850870 183851168 -15778982 - AluSx SINE Alu -13 299 1 789 288 7 32 chr5 183851168 183851206 -15778944 - MER113 DNA MER1_type? -268 253 216 250 216 0 0 chr5 183851204 183851255 -15778895 - MER113 DNA MER1_type? -469 52 2 * 213 39 0 0 chr5 183851324 183851350 -15778800 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 334 298 9 26 chr5 183851576 183851690 -15778460 + MLT1K LTR MaLR 4 115 -473 424 219 141 8 chr5 183851830 183851958 -15778192 + MLT1K LTR MaLR 376 520 -68 198 156 0 0 chr5 183852427 183852459 -15777691 + MIR SINE MIR 69 100 -162 611 305 32 0 chr5 183852949 183853136 -15777014 + MIR SINE MIR 64 256 -6 313 270 95 95 chr5 183853795 183853995 -15776155 + MIR SINE MIR 47 246 -16 217 347 0 20 chr5 183854141 183854239 -15775911 + L2 LINE L2 3184 3279 -34 534 272 35 75 chr5 183855646 183855874 -15774276 - MIR SINE MIR -20 242 24 1583 176 81 0 chr5 183855874 183856147 -15774003 - AluJo SINE Alu -11 301 7 435 38 0 0 chr5 183856430 183856483 -15773667 + (CAGC)n Simple_repeat Simple_repeat 3 55 0 493 274 45 22 chr5 183856839 183857018 -15773132 + L1MC/D LINE L1 5566 5748 -2060 258 201 58 144 chr5 183857944 183857992 -15772158 - Charlie8 DNA MER1_type -137 193 142 1976 165 3 3 chr5 183857992 183858289 -15771861 - AluJb SINE Alu -15 297 1 258 201 58 144 chr5 183858289 183858379 -15771771 - Charlie8 DNA MER1_type -188 142 67 2468 96 3 0 chr5 183858382 183858684 -15771466 + AluSx SINE Alu 1 303 -9 316 284 7 106 chr5 183858839 183858980 -15771170 + MIR3 SINE MIR 28 154 -54 25 0 0 0 chr5 183859353 183859378 -15770772 + AT_rich Low_complexity Low_complexity 1 25 0 760 169 0 0 chr5 183859378 183859502 -15770648 - FLAM_A SINE Alu -9 124 1 1708 158 17 28 chr5 183859969 183860260 -15769890 - AluJb SINE Alu -15 297 10 240 59 0 0 chr5 183860368 183860402 -15769748 + (A)n Simple_repeat Simple_repeat 1 34 0 679 288 30 0 chr5 183860455 183860653 -15769497 + MIR SINE MIR 27 230 -32 332 45 0 0 chr5 183860729 183860773 -15769377 + MADE1 DNA Mariner 37 80 0 193 289 105 13 chr5 183860991 183861067 -15769083 - L2 LINE L2 -22 3250 3168 631 275 24 38 chr5 183861996 183862142 -15768008 + MIR SINE MIR 8 152 -110 2340 98 3 22 chr5 183862142 183862458 -15767692 + AluSx SINE Alu 1 310 -2 631 275 24 38 chr5 183862458 183862522 -15767628 + MIR SINE MIR 152 215 -47 442 344 0 12 chr5 183862728 183862888 -15767262 + MIR SINE MIR 9 166 -96 443 314 200 6 chr5 183863095 183863594 -15766556 + L2 LINE L2 2710 3313 0 213 328 0 30 chr5 183864570 183864637 -15765513 - MIR SINE MIR -170 92 28 632 256 26 64 chr5 183864655 183864768 -15765382 + MER113 DNA MER1_type? 3 119 -402 2222 94 7 19 chr5 183864768 183865077 -15765073 - AluSx SINE Alu -7 305 1 632 256 26 64 chr5 183865077 183865276 -15764874 + MER113 DNA MER1_type? 119 303 -218 1817 144 53 3 chr5 183865310 183865594 -15764556 - AluJb SINE Alu -14 298 1 354 331 79 22 chr5 183866122 183866300 -15763850 - MIR SINE MIR -30 232 45 483 288 81 46 chr5 183866325 183866610 -15763540 - L2 LINE L2 -6 3307 3013 345 182 13 52 chr5 183866637 183866714 -15763436 + MLT1J LTR MaLR 110 183 -328 517 247 82 24 chr5 183866774 183866944 -15763206 + MLT1J2 LTR MaLR 269 448 -2 2071 150 37 11 chr5 183867413 183867787 -15762363 + MLT1B LTR MaLR 1 384 -6 195 374 9 9 chr5 183867819 183867934 -15762216 - L2 LINE L2 -1154 2160 2046 610 283 21 16 chr5 183868265 183868452 -15761698 + MER5A DNA MER1_type 2 189 0 314 216 136 0 chr5 183868474 183868562 -15761588 + L2 LINE L2 3171 3270 -2 213 323 65 16 chr5 183869486 183869610 -15760540 + MER5A DNA MER1_type 16 145 -44 275 291 11 44 chr5 183869846 183870028 -15760122 + (CAGAGA)n Simple_repeat Simple_repeat 2 177 0 367 197 265 27 chr5 183870336 183870500 -15759650 + MIR SINE MIR 7 200 -44 665 208 76 10 chr5 183870672 183870774 -15759376 + MER6B DNA MER2_type 1 95 -770 2284 124 3 0 chr5 183870774 183871080 -15759070 + AluSx SINE Alu 1 307 -5 665 208 76 10 chr5 183871080 183871174 -15758976 + MER6B DNA MER2_type 95 210 0 379 52 35 0 chr5 183872067 183872125 -15758025 + (CA)n Simple_repeat Simple_repeat 2 61 0 204 242 154 22 chr5 183872263 183872354 -15757796 + L2 LINE L2 3170 3272 0 475 280 125 31 chr5 183872568 183872830 -15757320 + MER102a DNA MER1_type 47 329 -1 522 228 62 43 chr5 183872832 183872994 -15757156 - MER112 DNA MER1_type 0 260 96 243 257 57 67 chr5 183873733 183873838 -15756312 - L2 LINE L2 0 3313 3210 345 258 156 27 chr5 183873859 183874045 -15756105 + MIR SINE MIR 49 258 -4 220 254 0 0 chr5 183874342 183874397 -15755753 + L2 LINE L2 3202 3256 -16 242 294 184 7 chr5 183874423 183874559 -15755591 + MIR SINE MIR 103 262 0 1403 151 0 1 chr5 183874980 183875287 -15754863 + MER2 DNA MER2_type 1 345 0 1504 295 56 37 chr5 183875951 183876520 -15753630 + MLT1K LTR MaLR 4 583 -5 2460 57 30 7 chr5 183876714 183877014 -15753136 + AluY SINE Alu 1 307 -4 325 313 123 18 chr5 183877014 183877177 -15752973 + MIR SINE MIR 22 201 -61 824 160 0 0 chr5 183877238 183877369 -15752781 + FLAM_A SINE Alu 1 131 -2 241 333 127 28 chr5 183877695 183877908 -15752242 + MIR SINE MIR 29 262 0 660 212 10 108 chr5 183879658 183879787 -15750363 + MIR SINE MIR 29 132 -130 1720 144 0 25 chr5 183879787 183880072 -15750078 + AluJo SINE Alu 15 292 -20 660 212 10 108 chr5 183880072 183880145 -15750005 + MIR SINE MIR 132 211 -51 287 307 321 0 chr5 183880189 183880326 -15749824 - MIR SINE MIR -70 192 12 246 229 184 46 chr5 183880592 183880701 -15749449 + MIR SINE MIR 108 231 -31 804 126 0 17 chr5 183880850 183880969 -15749181 + FLAM_C SINE Alu 1 117 -16 2146 74 0 3 chr5 183880974 183881282 -15748868 - AluY SINE Alu 0 307 1 467 268 29 22 chr5 183881340 183881478 -15748672 + MIR SINE MIR 5 143 -119 2118 136 0 0 chr5 183881915 183882224 -15747926 + AluSx SINE Alu 1 309 -3 182 187 0 147 chr5 183882299 183882374 -15747776 + L2 LINE L2 3010 3073 -199 790 191 11 71 chr5 183882515 183882698 -15747452 - MER20 DNA MER1_type -44 175 4 271 324 0 50 chr5 183882762 183882901 -15747249 + MIR SINE MIR 59 190 -72 25 0 0 0 chr5 183883029 183883054 -15747096 + AT_rich Low_complexity Low_complexity 1 25 0 387 60 0 0 chr5 183884031 183884081 -15746069 + (TG)n Simple_repeat Simple_repeat 2 51 0 2032 108 0 0 chr5 183884546 183884825 -15745325 + AluY SINE Alu 1 279 -32 852 0 0 27 chr5 183884825 183884936 -15745214 + (GAAA)n Simple_repeat Simple_repeat 1 108 0 418 299 80 40 chr5 183885178 183885379 -15744771 + MIR SINE MIR 22 230 -32 307 326 254 0 chr5 183885463 183885644 -15744506 - MIR SINE MIR -20 242 16 222 208 0 0 chr5 183886776 183886829 -15743321 + CT-rich Low_complexity Low_complexity 2 54 0 314 193 0 0 chr5 183886832 183886889 -15743261 - Alu SINE Alu 0 302 246 311 179 15 0 chr5 183886892 183886959 -15743191 + CT-rich Low_complexity Low_complexity 2 69 0 327 256 0 0 chr5 183887033 183887123 -15743027 + CT-rich Low_complexity Low_complexity 3 92 0 818 219 13 0 chr5 183887124 183887275 -15742875 - FRAM SINE Alu -13 153 1 436 230 40 72 chr5 183887309 183887461 -15742689 + MIR SINE MIR 115 261 -1 2058 54 4 0 chr5 183887510 183887768 -15742382 + L1PA13 LINE L1 5905 6163 0 211 333 20 0 chr5 183888729 183888831 -15741319 + MIR SINE MIR 47 150 -112 658 242 81 77 chr5 183888948 183889246 -15740904 + MER102b DNA MER1_type 36 334 -7 341 273 66 25 chr5 183889290 183889411 -15740739 + MIR SINE MIR 75 200 -62 373 316 16 98 chr5 183889476 183889549 -15740601 + MIR SINE MIR 84 161 -101 2224 89 3 0 chr5 183889549 183889851 -15740299 + AluY SINE Alu 9 311 0 373 316 16 98 chr5 183889851 183889970 -15740180 + MIR SINE MIR 161 260 -2 386 249 108 40 chr5 183890318 183890500 -15739650 + L1ME4a LINE L1 5726 5894 -227 1984 134 0 3 chr5 183890500 183890799 -15739351 + AluSx SINE Alu 1 298 -14 386 249 108 40 chr5 183890799 183890986 -15739164 + L1ME4a LINE L1 5894 6120 -1 2100 129 3 0 chr5 183891532 183891842 -15738308 - AluSx SINE Alu -1 311 1 354 164 0 0 chr5 183892411 183892466 -15737684 - MER6 DNA MER2_type -91 53 -1 498 238 0 8 chr5 183893019 183893141 -15737009 - L1ME3A LINE L1 -9 6161 6041 2100 88 7 10 chr5 183893192 183893486 -15736664 - AluSx SINE Alu -19 293 1 5931 241 93 45 chr5 183893556 183895225 -15734925 - HAL1 LINE L1 0 2507 697 1567 156 37 24 chr5 183895225 183895520 -15734630 - AluJo SINE Alu -13 299 1 5931 241 93 45 chr5 183895520 183896129 -15734021 - HAL1 LINE L1 -1810 697 119 306 0 0 0 chr5 183896136 183896170 -15733980 + (TA)n Simple_repeat Simple_repeat 2 35 0 2240 94 3 0 chr5 183896243 183896552 -15733598 - AluY SINE Alu -1 310 1 703 195 49 0 chr5 183896554 183896677 -15733473 - FLAM_A SINE Alu -4 129 1 557 299 61 45 chr5 183896848 183897102 -15733048 + MIR SINE MIR 1 256 -6 889 274 8 16 chr5 183897648 183897903 -15732247 - MIR SINE MIR 0 262 10 947 212 79 0 chr5 183897979 183898182 -15731968 + MER20 DNA MER1_type 1 219 0 444 187 13 0 chr5 183898220 183898295 -15731855 + tRNA-Lys-AAG tRNA tRNA 1 76 0 210 37 0 0 chr5 183898312 183898339 -15731811 + (A)n Simple_repeat Simple_repeat 1 27 0 200 275 0 0 chr5 183898680 183898720 -15731430 + (ATGGTG)n Simple_repeat Simple_repeat 5 44 0 2089 98 0 23 chr5 183898728 183899034 -15731116 - AluSx SINE Alu -13 299 1 352 291 168 39 chr5 183899040 183899243 -15730907 - MIR SINE MIR 0 262 34 375 267 21 112 chr5 183899622 183899907 -15730243 + MLT1J LTR MaLR 253 511 0 258 287 223 14 chr5 183899921 183900093 -15730057 - MIR SINE MIR -34 228 19 1600 153 3 46 chr5 183900157 183900483 -15729667 + AluSx SINE Alu 1 312 0 581 301 146 5 chr5 183901123 183901342 -15728808 - MIR SINE MIR -9 253 4 215 329 12 99 chr5 183901398 183901493 -15728657 + MER5B DNA MER1_type 31 108 -70 2008 128 0 7 chr5 183901493 183901790 -15728360 - AluSx SINE Alu -17 295 1 215 329 12 99 chr5 183901790 183901855 -15728295 + MER5B DNA MER1_type 108 177 -1 381 143 159 0 chr5 183902084 183902147 -15728003 + 5S rRNA rRNA 16 88 -33 753 12 0 0 chr5 183903430 183903516 -15726634 + (TTTTC)n Simple_repeat Simple_repeat 5 90 0 398 289 13 20 chr5 183903543 183903695 -15726455 + GA-rich Low_complexity Low_complexity 2 152 0 192 77 0 0 chr5 183903705 183903731 -15726419 + (GA)n Simple_repeat Simple_repeat 1 26 0 305 301 13 26 chr5 183903733 183903889 -15726261 + GA-rich Low_complexity Low_complexity 3 156 0 4752 73 50 17 chr5 183903990 183904745 -15725405 - SVA Other Other -606 780 1 228 35 0 0 chr5 183904748 183904777 -15725373 + (GGGAGA)n Simple_repeat Simple_repeat 5 33 0 522 275 82 25 chr5 183904784 183904801 -15725349 - L1ME LINE L1 -4892 1650 1635 1778 156 24 0 chr5 183904801 183905090 -15725060 - AluSx SINE Alu -16 296 1 522 275 82 25 chr5 183905090 183905425 -15724725 - L1ME LINE L1 -4907 1635 1278 17938 116 40 52 chr5 183905482 183906010 -15724140 + Tigger3(Golem) DNA MER2_type 1 534 -2495 804 172 0 0 chr5 183906010 183906138 -15724012 + FLAM_C SINE Alu 5 132 -1 17938 116 40 52 chr5 183906138 183906267 -15723883 + Tigger3(Golem) DNA MER2_type 534 663 -2366 2168 108 0 0 chr5 183906267 183906563 -15723587 + AluSx SINE Alu 1 296 -16 17938 116 40 52 chr5 183906563 183907787 -15722363 + Tigger3(Golem) DNA MER2_type 663 1900 -1129 2256 111 56 17 chr5 183907787 183908147 -15722003 - THE1C LTR MaLR 0 375 2 17938 116 40 52 chr5 183908147 183908273 -15721877 + Tigger3(Golem) DNA MER2_type 1900 2026 -1003 448 108 40 0 chr5 183908273 183908347 -15721803 - L1PA13 LINE L1 0 6163 6087 17938 116 40 52 chr5 183908347 183909400 -15720750 + Tigger3(Golem) DNA MER2_type 2026 3029 0 375 316 55 51 chr5 183909428 183909556 -15720594 - L1ME LINE L1 -5288 1346 1220 2306 145 67 12 chr5 183909556 183909962 -15720188 - MSTA LTR MaLR 0 428 1 375 316 55 51 chr5 183909962 183909987 -15720163 - L1ME LINE L1 -5414 1220 1197 683 217 0 0 chr5 183909987 183910102 -15720048 - FLAM_A SINE Alu -18 115 1 375 316 55 51 chr5 183910102 183910200 -15719950 - L1ME LINE L1 -5437 1197 1093 303 319 31 49 chr5 183910408 183910571 -15719579 - L1ME LINE L1 -5591 1043 884 486 256 34 34 chr5 183910612 183910810 -15719340 - L1ME LINE L1 -5860 774 577 405 294 33 2 chr5 183910921 183911049 -15719101 + MIR SINE MIR 3 136 -72 249 159 0 0 chr5 183911052 183911096 -15719054 + T-rich Low_complexity Low_complexity 1 44 0 199 225 175 38 chr5 183911096 183911176 -15718974 + MIR SINE MIR 172 262 0 1840 148 0 10 chr5 183911662 183911959 -15718191 - AluJb SINE Alu -18 294 1 1401 160 98 33 chr5 183911965 183912272 -15717878 - L1MB5 LINE L1 0 6174 5848 932 159 0 6 chr5 183912567 183912724 -15717426 + AluJb SINE Alu 123 278 -34 423 0 0 0 chr5 183912724 183912771 -15717379 + (CA)n Simple_repeat Simple_repeat 2 48 0 2255 101 3 0 chr5 183913110 183913418 -15716732 - AluSq SINE Alu -4 309 1 25 0 0 0 chr5 183913804 183913829 -15716321 + AT_rich Low_complexity Low_complexity 1 25 0 1361 174 100 0 chr5 183914184 183914454 -15715696 - L1MB5 LINE L1 0 6174 5878 305 167 73 125 chr5 183915384 183915457 -15714693 + MIR3 SINE MIR 82 150 -58 1706 199 61 50 chr5 183915457 183915919 -15714231 + MLT1C LTR MaLR 1 467 0 305 167 73 125 chr5 183915919 183915941 -15714209 + MIR3 SINE MIR 150 172 -36 2157 103 3 0 chr5 183916014 183916314 -15713836 - AluSq SINE Alu -12 301 1 192 239 43 0 chr5 183916428 183916474 -15713676 - MIR SINE MIR -103 105 58 424 293 102 12 chr5 183916753 183916920 -15713230 + MIR SINE MIR 2 183 -79 189 333 35 0 chr5 183917128 183917185 -15712965 - L2 LINE L2 -9 3263 3205 * 213 369 0 12 chr5 183917167 183917251 -15712899 + MIR SINE MIR 6 88 -174 1572 153 51 4 chr5 183917672 183917947 -15712203 - AluJo SINE Alu -14 298 11 1740 166 30 0 chr5 183918012 183918314 -15711836 + AluJb SINE Alu 1 311 -1 762 282 27 80 chr5 183918683 183919084 -15711066 + MLT1K LTR MaLR 201 580 -8 410 106 24 94 chr5 183919271 183919356 -15710794 - AluJ/FLAM SINE Alu -241 61 1 268 171 0 0 chr5 183919392 183919433 -15710717 + Alu SINE Alu 1 41 -259 2150 115 0 0 chr5 183920001 183920306 -15709844 + AluSq SINE Alu 1 305 -8 1289 158 9 18 chr5 183920472 183920693 -15709457 - MER20 DNA MER1_type 0 219 1 627 298 103 23 chr5 183921361 183921663 -15708487 + L2 LINE L2 2983 3308 -5 180 176 0 0 chr5 183922877 183922911 -15707239 + (CAA)n Simple_repeat Simple_repeat 2 35 0 272 309 78 39 chr5 183923895 183924125 -15706025 + L2 LINE L2 2818 3056 -216 706 263 47 28 chr5 183924239 183924494 -15705656 + MIR SINE MIR 2 261 -1 881 199 0 0 chr5 183924511 183924677 -15705473 + FRAM SINE Alu 1 166 -10 181 157 0 39 chr5 183924753 183924804 -15705346 + CT-rich Low_complexity Low_complexity 2 50 0 202 340 90 0 chr5 183925367 183925467 -15704683 + MIR SINE MIR 31 139 -123 21 0 0 0 chr5 183926516 183926537 -15703613 + AT_rich Low_complexity Low_complexity 1 21 0 206 300 0 0 chr5 183927077 183927127 -15703023 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 191 364 0 0 chr5 183927176 183927242 -15702908 - L2 LINE L2 -54 3259 3194 873 268 83 0 chr5 183927254 183927508 -15702642 + Charlie8 DNA MER1_type 2 276 -2141 204 298 60 12 chr5 183927666 183927750 -15702400 - L2 LINE L2 -194 3078 2991 370 220 119 0 chr5 183928159 183928279 -15701871 + L1MC4 LINE L1 7906 7995 0 21 0 0 0 chr5 183928438 183928459 -15701691 + AT_rich Low_complexity Low_complexity 1 21 0 228 204 112 82 chr5 183928580 183928678 -15701472 - MER5A DNA MER1_type -80 109 9 714 221 45 0 chr5 183928872 183929026 -15701124 - FRAM SINE Alu -15 161 1 1206 134 86 0 chr5 183929079 183929265 -15700885 - AluSg/x SINE Alu -28 284 83 563 249 55 55 chr5 183929317 183929377 -15700773 - MIR SINE MIR -46 216 157 1681 232 81 24 chr5 183929377 183929886 -15700264 + MLT1F LTR MaLR 5 542 0 563 249 55 55 chr5 183929886 183930026 -15700124 - MIR SINE MIR -104 158 16 213 257 43 43 chr5 183930647 183930717 -15699433 - MIR SINE MIR -23 239 170 238 314 48 16 chr5 183930873 183930997 -15699153 + MARNA DNA Mariner 198 325 -261 332 270 0 0 chr5 183931014 183931088 -15699062 + L2 LINE L2 3195 3268 -4 213 188 116 14 chr5 183931149 183931218 -15698932 + MER91A DNA MER1_type 121 196 0 374 271 101 25 chr5 183931966 183932165 -15697985 + Charlie8 DNA MER1_type 75 288 -2129 1999 164 7 0 chr5 183932747 183933052 -15697098 - AluJb SINE Alu -5 307 1 280 262 0 90 chr5 183933251 183933373 -15696777 + L2 LINE L2 2945 3055 -217 1131 255 50 31 chr5 183933714 183934137 -15696013 - L1MC4 LINE L1 0 8042 7612 228 241 54 36 chr5 183934155 183934267 -15695883 + MER113 DNA MER1_type? 11 124 -397 326 219 0 0 chr5 183934384 183934448 -15695702 + MER113 DNA MER1_type? 458 521 0 448 311 30 0 chr5 183934448 183934580 -15695570 - MIR SINE MIR -80 182 47 823 173 249 0 chr5 183934582 183934767 -15695383 + MER46A DNA MER2_type 1 231 -5 2282 109 3 3 chr5 183934768 183935070 -15695080 - AluSx SINE Alu -10 302 1 700 269 88 19 chr5 183935133 183935349 -15694801 - MIR SINE MIR -12 250 20 344 161 108 75 chr5 183935759 183935852 -15694298 + MIR SINE MIR 117 212 -50 539 221 0 64 chr5 183935857 183935997 -15694153 + FLAM_A SINE Alu 2 132 -1 406 224 0 28 chr5 183936181 183936360 -15693790 + (TCCA)n Simple_repeat Simple_repeat 2 175 0 283 207 0 23 chr5 183936386 183936473 -15693677 + (TCCA)n Simple_repeat Simple_repeat 2 86 0 298 324 54 0 chr5 183936484 183936595 -15693555 - L2 LINE L2 -5 3267 3151 205 214 116 45 chr5 183936939 183937051 -15693099 + L3 LINE CR1 1391 1510 -67 275 280 97 0 chr5 183937433 183937526 -15692624 + MIR SINE MIR 44 145 -63 816 154 37 37 chr5 183937551 183937713 -15692437 - FRAM SINE Alu -4 162 1 2260 124 0 0 chr5 183937721 183938027 -15692123 - AluSx SINE Alu -6 306 1 200 324 176 0 chr5 183938281 183938383 -15691767 - MIR SINE MIR -96 166 47 349 120 0 80 chr5 183938591 183938677 -15691473 + AluSg SINE Alu 1 44 -256 2040 70 0 4 chr5 183938717 183938984 -15691166 + AluSg SINE Alu 38 303 0 1774 190 3 0 chr5 183939341 183939636 -15690514 - AluJo SINE Alu -16 296 1 388 322 16 55 chr5 183939652 183939835 -15690315 - MIR SINE MIR 0 262 87 208 179 0 26 chr5 183940093 183940132 -15690018 + MIR SINE MIR 43 80 -182 346 263 165 98 chr5 183940262 183940517 -15689633 + MER102a DNA MER1_type 50 321 -9 1853 153 13 17 chr5 183941152 183941453 -15688697 + AluJb SINE Alu 5 304 -8 247 221 116 12 chr5 183941561 183941647 -15688503 + L2 LINE L2 3176 3270 -2 269 277 0 107 chr5 183942164 183942276 -15687874 - MIR SINE MIR -71 191 92 819 223 22 5 chr5 183942656 183942840 -15687310 - MER5A DNA MER1_type -2 187 1 40 37 0 0 chr5 183943195 183943249 -15686901 + AT_rich Low_complexity Low_complexity 1 54 0 2275 119 0 13 chr5 183943361 183943672 -15686478 + AluSx SINE Alu 1 307 -5 195 194 0 0 chr5 183944583 183944619 -15685531 - L2 LINE L2 -9 3304 3269 198 0 0 0 chr5 183944749 183944771 -15685379 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1856 147 8 0 chr5 183944781 183945047 -15685103 - AluSq SINE Alu -45 268 1 452 272 0 74 chr5 183945119 183945219 -15684931 + MER5B DNA MER1_type 29 114 -64 2210 124 7 0 chr5 183945219 183945526 -15684624 - AluSx SINE Alu -3 309 1 452 272 0 74 chr5 183945526 183945587 -15684563 + MER5B DNA MER1_type 114 178 0 238 319 88 0 chr5 183945657 183945748 -15684402 + L2 LINE L2 3215 3313 0 274 290 137 38 chr5 183946287 183946418 -15683732 + MIR3 SINE MIR 15 158 -50 430 194 120 0 chr5 183946419 183946527 -15683623 + FLAM_A SINE Alu 7 127 -15 228 227 15 45 chr5 183946547 183946613 -15683537 - MER5A DNA MER1_type -1 188 125 1138 178 17 9 chr5 183946615 183946846 -15683304 + L1MB3 LINE L1 5749 5981 -202 291 303 56 14 chr5 183947671 183947813 -15682337 - MIR SINE MIR -6 256 109 302 248 20 30 chr5 183947898 183947999 -15682151 + MIR SINE MIR 92 191 -71 547 224 170 7 chr5 183949351 183949498 -15680652 - MER5A DNA MER1_type 0 189 19 1763 102 8 16 chr5 183950402 183950648 -15679502 - AluSg/x SINE Alu 0 312 69 201 121 0 0 chr5 183952630 183952663 -15677487 + (TC)n Simple_repeat Simple_repeat 2 34 0 528 303 79 61 chr5 183953326 183953554 -15676596 - L2 LINE L2 -1 3271 3040 213 94 0 0 chr5 183954855 183954887 -15675263 + (TC)n Simple_repeat Simple_repeat 1 32 0 2252 135 0 0 chr5 183954887 183955198 -15674952 - AluSx SINE Alu -1 311 1 563 245 38 19 chr5 183955625 183955784 -15674366 + MER103 DNA DNA 1 162 -4 322 314 68 37 chr5 183956006 183956197 -15673953 + L2 LINE L2 3039 3235 -37 262 284 39 5 chr5 183957195 183957354 -15672796 + MIR SINE MIR 8 243 -19 2137 182 38 11 chr5 183958480 183958930 -15671220 + MLT1C LTR MaLR 1 462 -5 457 248 127 6 chr5 183959971 183960128 -15670022 + MIR SINE MIR 84 259 -3 343 271 76 8 chr5 183960247 183960365 -15669785 + MIR SINE MIR 47 172 -90 2187 119 37 6 chr5 183960480 183960833 -15669317 + THE1B LTR MaLR 1 364 0 225 163 41 41 chr5 183961365 183961414 -15668736 + MIR SINE MIR 159 207 -55 185 194 0 0 chr5 183961455 183961486 -15668664 + L2 LINE L2 3226 3256 -16 293 317 29 0 chr5 183961596 183961700 -15668450 - MER5B DNA MER1_type -71 107 1 268 265 137 0 chr5 183961731 183961848 -15668302 - L2 LINE L2 -259 3054 2922 667 277 26 50 chr5 183962480 183962744 -15667406 - MIR SINE MIR -7 255 1 273 271 131 25 chr5 183962804 183962926 -15667224 + MIR SINE MIR 80 214 -48 360 0 0 0 chr5 183962955 183962995 -15667155 + (ATG)n Simple_repeat Simple_repeat 1 40 0 477 0 0 0 chr5 183963506 183963559 -15666591 + (TG)n Simple_repeat Simple_repeat 2 54 0 2097 122 15 18 chr5 183963597 183963932 -15666218 + MER1B DNA MER1_type 1 334 -3 2281 104 23 0 chr5 183963951 183964250 -15665900 + AluSc SINE Alu 1 306 -3 592 217 145 42 chr5 183964322 183964488 -15665662 + MER5A DNA MER1_type 7 189 0 264 317 90 28 chr5 183964583 183964728 -15665422 - MIR SINE MIR 0 262 109 512 324 27 18 chr5 183964740 183964959 -15665191 + MIR SINE MIR 13 233 -29 402 254 17 25 chr5 183965697 183965815 -15664335 - MIR SINE MIR -131 131 15 1943 147 45 0 chr5 183966273 183966565 -15663585 + AluSx SINE Alu 1 305 -7 355 304 34 7 chr5 183967157 183967324 -15662826 - MIR SINE MIR -50 212 43 2330 89 17 0 chr5 183967835 183968128 -15662022 - AluSg SINE Alu -12 298 1 485 224 90 29 chr5 183968201 183968400 -15661750 + MIR SINE MIR 43 261 -1 219 267 33 44 chr5 183969192 183969282 -15660868 + L2 LINE L2 3139 3227 -45 373 352 68 39 chr5 183970353 183970663 -15659487 + L2 LINE L2 2970 3288 -25 741 225 7 0 chr5 183970670 183970821 -15659329 + MIR SINE MIR 12 163 -99 2844 144 4 10 chr5 183970823 183971317 -15658833 + L1MB8 LINE L1 5646 6136 -42 1954 141 11 0 chr5 183971317 183971601 -15658549 + AluSx SINE Alu 24 310 -2 1152 109 0 0 chr5 183971608 183971654 -15658496 + (GA)n Simple_repeat Simple_repeat 1 221 0 1152 109 0 0 chr5 183971654 183971829 -15658321 + (GA)n Simple_repeat Simple_repeat 2 176 0 197 257 0 71 chr5 183971868 183971938 -15658212 + MIR SINE MIR 148 212 -50 711 264 42 5 chr5 183971955 183972148 -15658002 - MIR SINE MIR -3 259 60 767 92 21 42 chr5 183972547 183972689 -15657461 - L1MA5A LINE L1 0 6297 6159 2219 121 0 6 chr5 183972863 183973177 -15656973 - AluSx SINE Alu 0 312 1 241 288 97 78 chr5 183973296 183973597 -15656553 + L2 LINE L2 2934 3200 -72 747 161 97 0 chr5 183973664 183973819 -15656331 - MER20 DNA MER1_type -21 198 29 242 304 61 14 chr5 183974289 183974437 -15655713 - MIR SINE MIR -96 166 12 2424 93 0 3 chr5 183974607 183974917 -15655233 - AluSx SINE Alu -3 309 1 339 206 14 0 chr5 183975192 183975265 -15654885 - MIR3 SINE MIR -53 155 82 276 296 57 31 chr5 183975316 183975475 -15654675 + MIR SINE MIR 79 241 -21 389 280 45 80 chr5 183975497 183975732 -15654418 + MIR SINE MIR 7 234 -28 758 164 0 8 chr5 183975732 183975866 -15654284 - FLAM_C SINE Alu 0 133 1 389 280 45 80 chr5 183975866 183975894 -15654256 + MIR SINE MIR 234 261 -1 481 307 26 78 chr5 183976492 183976798 -15653352 - L2 LINE L2 -47 3225 2936 1466 187 3 37 chr5 183976956 183977277 -15652873 - AluJo SINE Alu 0 312 1 220 189 0 19 chr5 183978106 183978159 -15651991 - MER5A DNA MER1_type -65 124 73 2088 154 0 0 chr5 183978200 183978511 -15651639 + AluJb SINE Alu 1 311 -1 726 271 141 25 chr5 183978727 183979036 -15651114 - HsTC2a DNA Tc2 -1159 739 467 2337 127 0 0 chr5 183979036 183979344 -15650806 - AluSx SINE Alu -3 309 2 726 271 141 25 chr5 183979344 183979584 -15650566 - HsTC2a DNA Tc2 -1431 467 122 272 227 93 0 chr5 183979718 183979793 -15650357 - Charlie8 DNA MER1_type -991 1426 1345 355 343 14 14 chr5 183979939 183980149 -15650001 - L1MC4a LINE L1 -1902 5906 5697 340 246 76 42 chr5 183980727 183980845 -15649305 - MIR SINE MIR -72 190 69 2124 103 0 3 chr5 183981080 183981382 -15648768 - AluSx SINE Alu 0 301 1 1940 89 0 16 chr5 183982063 183982311 -15647839 - AluSc SINE Alu -65 244 1 354 311 24 22 chr5 183982360 183982510 -15647640 - L1MC4 LINE L1 0 8042 7773 2397 106 0 3 chr5 183982621 183982932 -15647218 - AluSx SINE Alu -2 310 1 563 254 71 74 chr5 183983169 183983492 -15646658 - L1MC4a LINE L1 -318 7490 7169 1270 230 124 21 chr5 183983646 183983985 -15646165 + MLT1A2 LTR MaLR 1 374 0 581 292 39 47 chr5 183984287 183984520 -15645630 + MIR SINE MIR 30 260 -2 2057 141 0 13 chr5 183984530 183985194 -15644956 + AluSx SINE Alu 1 660 0 1414 166 12 8 chr5 183985494 183985741 -15644409 + L1MDa LINE L1 20 267 -6273 * 2718 174 49 33 chr5 183985737 183986408 -15643742 + L1MDa LINE L1 1047 1728 -4812 618 331 111 25 chr5 183986655 183987015 -15643135 + L2 LINE L2 2923 3313 0 489 268 22 83 chr5 183987036 183987308 -15642842 - MIR SINE MIR -7 255 5 1764 89 5 5 chr5 183987881 183988148 -15642002 + AluSq SINE Alu 70 336 0 316 336 34 17 chr5 183988537 183988656 -15641494 + MIR SINE MIR 23 143 -65 389 310 69 25 chr5 183990133 183990336 -15639814 - MIR SINE MIR -45 217 6 308 95 0 0 chr5 183990443 183990505 -15639645 + Alu SINE Alu 248 309 0 2292 106 0 3 chr5 183990507 183990809 -15639341 + AluSx SINE Alu 1 301 -11 381 266 185 22 chr5 183990809 183990993 -15639157 + MIR SINE MIR 4 217 -45 2058 92 11 25 chr5 183991577 183991879 -15638271 - AluSx SINE Alu 0 302 5 278 219 31 10 chr5 183992808 183992904 -15637246 + (CGG)n Simple_repeat Simple_repeat 1 98 0 2171 87 45 0 chr5 183993725 183994011 -15636139 + AluSg SINE Alu 1 299 -11 244 364 61 0 chr5 183994241 183994373 -15635777 - MIR SINE MIR -6 256 117 282 297 44 33 chr5 183994428 183994519 -15635631 + MIR SINE MIR 17 108 -154 197 375 88 31 chr5 183995269 183995530 -15634620 - L2 LINE L2 -443 2871 2596 2185 85 18 21 chr5 183995718 183996021 -15634129 + AluSg SINE Alu 1 302 0 2535 63 3 0 chr5 183996039 183996339 -15633811 + AluSp SINE Alu 1 301 -12 2573 138 48 21 chr5 183996427 183996905 -15633245 + L1MB3 LINE L1 5686 6176 -7 262 277 59 0 chr5 183997561 183997662 -15632488 - L1MEc LINE L1 -3650 2565 2459 796 242 102 8 chr5 183997675 183997939 -15632211 - L1MEc LINE L1 -3951 2445 2157 1738 256 87 52 chr5 183997953 183998105 -15632045 - L1MEc LINE L1 -4499 1897 1752 2117 138 3 0 chr5 183998105 183998401 -15631749 - AluSg SINE Alu -13 297 1 1738 256 87 52 chr5 183998401 183998990 -15631160 - L1MEc LINE L1 -4644 1752 1109 1823 169 3 20 chr5 183998990 183999291 -15630859 - AluJo SINE Alu -16 296 1 1738 256 87 52 chr5 183999291 183999552 -15630598 - L1MEc LINE L1 -5287 1109 859 430 249 50 80 chr5 183999737 183999938 -15630212 + MLT1J LTR MaLR 308 502 -9 399 318 0 9 chr5 183999944 184000054 -15630096 - L2 LINE L2 -21 3292 3184 657 242 78 7 chr5 184000059 184000212 -15629938 + MER58A DNA MER1_type 13 176 -48 1249 191 54 18 chr5 184000298 184000575 -15629575 - Charlie1b DNA MER1_type -236 287 1 2517 63 3 10 chr5 184000718 184001020 -15629130 + AluSp SINE Alu 1 300 -13 226 294 106 0 chr5 184001068 184001153 -15628997 - L2 LINE L2 -214 3058 2965 188 167 64 167 chr5 184001883 184001961 -15628189 + L2 LINE L2 3207 3276 -37 628 278 45 15 chr5 184001971 184002169 -15627981 - MIR SINE MIR -57 205 2 2231 106 3 13 chr5 184002220 184002521 -15627629 + AluSq SINE Alu 1 298 -15 3306 112 82 121 chr5 184002531 184002755 -15627395 + L1MB3 LINE L1 5389 5620 -563 1712 175 24 3 chr5 184002755 184003046 -15627104 + AluJo SINE Alu 1 297 -15 3306 112 82 121 chr5 184003046 184003119 -15627031 + L1MB3 LINE L1 5620 5694 -489 2202 93 18 0 chr5 184003119 184003420 -15626730 - AluSq SINE Alu 0 306 1 3306 112 82 121 chr5 184003420 184003698 -15626452 + L1MB3 LINE L1 5694 5927 -256 2422 100 0 0 chr5 184003698 184003997 -15626153 + AluSq SINE Alu 1 299 -14 3306 112 82 121 chr5 184003997 184004243 -15625907 + L1MB3 LINE L1 5927 6181 -2 441 297 20 34 chr5 184005347 184005495 -15624655 + MIR3 SINE MIR 31 176 -32 646 242 45 22 chr5 184007166 184007344 -15622806 - MER5A DNA MER1_type -1 188 7 2494 88 3 0 chr5 184007961 184008269 -15621881 - AluSp SINE Alu -4 309 1 494 204 132 51 chr5 184008848 184008946 -15621204 - MER5A DNA MER1_type 0 189 100 2331 94 10 0 chr5 184008946 184009245 -15620905 - AluSx SINE Alu -10 302 1 494 204 132 51 chr5 184009245 184009317 -15620833 - MER5A DNA MER1_type -89 100 4 2040 127 45 0 chr5 184009447 184009739 -15620411 + AluSx SINE Alu 1 305 -7 274 257 9 55 chr5 184009974 184010083 -15620067 - MIR SINE MIR -2 260 157 * 1091 228 49 6 chr5 184010073 184010318 -15619832 + MIR SINE MIR 5 257 -5 1409 168 6 105 chr5 184010318 184010652 -15619498 - AluSx SINE Alu 0 302 2 2188 129 0 19 chr5 184010655 184010966 -15619184 - AluSx SINE Alu -7 305 1 388 194 31 51 chr5 184010966 184011064 -15619086 - MIR SINE MIR -105 157 62 281 263 21 21 chr5 184011521 184011616 -15618534 - MIR SINE MIR -4 258 164 366 168 0 115 chr5 184011618 184011709 -15618441 + L1MC4 LINE L1 7790 7867 -175 1761 166 0 17 chr5 184011709 184012004 -15618146 - AluJo SINE Alu -22 290 1 366 168 0 115 chr5 184012004 184012025 -15618125 + L1MC4 LINE L1 7867 7889 -153 264 242 31 31 chr5 184012032 184012160 -15617990 + (TA)n Simple_repeat Simple_repeat 1 128 0 323 218 18 71 chr5 184012162 184012332 -15617818 + L1MC4 LINE L1 7881 8041 -1 262 140 60 20 chr5 184012385 184012435 -15617715 - MIR SINE MIR -95 167 116 220 322 41 34 chr5 184012579 184012725 -15617425 - L2 LINE L2 -910 2404 2258 227 299 92 58 chr5 184013151 184013325 -15616825 - L2 LINE L2 -889 2425 2246 341 269 174 40 chr5 184013819 184013968 -15616182 + MER5A DNA MER1_type 1 169 -20 2302 84 0 29 chr5 184014645 184014956 -15615194 + AluY SINE Alu 1 302 -9 958 268 37 8 chr5 184015252 184015498 -15614652 + MIR SINE MIR 10 262 0 2311 124 0 0 chr5 184015658 184015964 -15614186 + AluSx SINE Alu 1 306 -6 2233 112 7 0 chr5 184016143 184016439 -15613711 - AluSx SINE Alu -14 298 1 732 206 33 67 chr5 184016648 184016828 -15613322 + MER5B DNA MER1_type 4 177 -1 219 283 127 40 chr5 184016899 184017000 -15613150 - MIR SINE MIR -65 143 37 1016 113 0 0 chr5 184017287 184017420 -15612730 + AluSq/x SINE Alu 1 133 -180 2213 115 17 0 chr5 184017431 184017726 -15612424 + AluSp SINE Alu 1 300 -13 945 206 27 0 chr5 184017855 184018039 -15612111 - MER5A DNA MER1_type 0 189 1 478 260 24 16 chr5 184018455 184018582 -15611568 - MIR SINE MIR -70 192 65 1521 203 7 40 chr5 184018939 184019240 -15610910 - AluJo SINE Alu -21 291 1 373 237 82 0 chr5 184019415 184019512 -15610638 + MIR SINE MIR 97 201 -61 541 178 217 0 chr5 184019540 184019669 -15610481 + MER5A DNA MER1_type 33 189 0 * 583 214 8 38 chr5 184019669 184019797 -15610353 + L2 LINE L2 3189 3312 -1 207 339 83 37 chr5 184019881 184019990 -15610160 + L2 LINE L2 3138 3251 -21 328 272 143 27 chr5 184020117 184020264 -15609886 + L2 LINE L2 3147 3310 -3 276 208 52 73 chr5 184020787 184020883 -15609267 - MIR SINE MIR -48 214 121 2383 99 0 7 chr5 184020899 184021201 -15608949 - AluSq SINE Alu -13 300 1 268 160 3 37 chr5 184021364 184021428 -15608722 + MIR SINE MIR 92 143 -65 572 263 96 79 chr5 184023374 184023460 -15606690 + MIR SINE MIR 19 102 -160 2378 82 0 3 chr5 184023460 184023753 -15606397 - AluSq SINE Alu -21 292 1 572 263 96 79 chr5 184023753 184023906 -15606244 + MIR SINE MIR 102 262 0 2158 115 0 0 chr5 184024220 184024522 -15605628 + AluSx SINE Alu 5 306 0 416 263 40 53 chr5 184024825 184024903 -15605247 + MIR3 SINE MIR 42 119 -89 2544 78 3 0 chr5 184024903 184025210 -15604940 - AluSp SINE Alu -5 308 1 416 263 40 53 chr5 184025210 184025283 -15604867 + MIR3 SINE MIR 119 191 -17 198 129 0 0 chr5 184025333 184025364 -15604786 + L3b LINE CR1 1180 1210 -373 277 289 60 34 chr5 184025395 184025544 -15604606 - MIR SINE MIR -54 208 56 491 308 113 5 chr5 184025727 184025948 -15604202 + MIR SINE MIR 13 257 -5 324 0 0 0 chr5 184027035 184027071 -15603079 + (CA)n Simple_repeat Simple_repeat 2 37 0 353 236 94 31 chr5 184027295 184027422 -15602728 - MIR3 SINE MIR -13 195 61 2178 112 6 10 chr5 184027629 184027941 -15602209 + AluSx SINE Alu 1 311 -1 680 238 121 45 chr5 184027990 184028322 -15601828 - MER113 DNA MER1_type? -159 362 6 264 194 117 48 chr5 184028738 184028841 -15601309 + MIR3 SINE MIR 91 200 -8 285 241 17 0 chr5 184028880 184028938 -15601212 - MIR SINE MIR -59 149 91 231 36 0 0 chr5 184029031 184029059 -15601091 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 2200 129 0 6 chr5 184030587 184030898 -15599252 - AluSx SINE Alu -3 309 1 256 317 21 7 chr5 184030965 184031107 -15599043 + MER103 DNA DNA 12 155 -11 707 229 57 75 chr5 184031162 184031209 -15598941 - MER58A DNA MER1_type -2197 223 177 1966 108 90 14 chr5 184031209 184031497 -15598653 + AluSp SINE Alu 1 310 -3 707 229 57 75 chr5 184031497 184031676 -15598474 - MER58A DNA MER1_type -2243 177 1 182 353 116 55 chr5 184032038 184032435 -15597715 + L2 LINE L2 2828 3248 -24 2040 122 37 0 chr5 184032714 184033008 -15597142 - AluSx SINE Alu -7 305 1 1935 142 27 0 chr5 184033037 184033332 -15596818 + AluSx SINE Alu 1 303 -9 694 243 33 69 chr5 184033345 184033678 -15596472 + L1MC4 LINE L1 7638 7958 -84 2623 122 18 52 chr5 184033678 184033856 -15596294 + MSTB LTR MaLR 1 184 -242 2057 155 3 0 chr5 184033856 184034165 -15595985 - AluSx SINE Alu -2 310 1 2623 122 18 52 chr5 184034165 184034389 -15595761 + MSTB LTR MaLR 184 389 -37 2317 99 7 7 chr5 184034389 184034692 -15595458 - AluSc SINE Alu -6 303 1 2623 122 18 52 chr5 184034692 184034729 -15595421 + MSTB LTR MaLR 389 426 0 189 276 81 46 chr5 184034750 184034837 -15595313 + L2 LINE L2 3174 3263 -9 200 219 47 62 chr5 184035659 184035723 -15594427 + MER5B DNA MER1_type 55 117 -61 1697 121 100 32 chr5 184035750 184035888 -15594262 + AluJb SINE Alu 1 128 -184 2361 96 0 0 chr5 184035888 184036179 -15593971 + AluSx SINE Alu 6 296 -16 1697 121 100 32 chr5 184036179 184036320 -15593830 + AluJb SINE Alu 128 299 -13 235 297 16 0 chr5 184037006 184037070 -15593080 + L2 LINE L2 3208 3272 0 2165 95 39 0 chr5 184037428 184037713 -15592437 - AluSx SINE Alu -16 296 1 369 43 0 0 chr5 184037785 184037832 -15592318 + (CA)n Simple_repeat Simple_repeat 1 47 0 739 257 24 9 chr5 184038109 184038319 -15591831 - LTR16A LTR ERVL -8 442 230 2460 84 0 13 chr5 184038764 184039075 -15591075 - AluSx SINE Alu -1 311 5 509 219 102 0 chr5 184039242 184039370 -15590780 + MER63A DNA MER1_type 70 210 0 403 351 32 16 chr5 184039855 184040040 -15590110 - MIR SINE MIR -70 192 5 1572 202 97 32 chr5 184040144 184040516 -15589634 + MSTD LTR MaLR 1 396 0 770 197 106 15 chr5 184041713 184041911 -15588239 + MER20 DNA MER1_type 1 216 -3 2504 71 3 0 chr5 184042334 184042631 -15587519 - AluSp SINE Alu -15 298 1 2060 99 3 46 chr5 184042660 184042962 -15587188 - AluSx SINE Alu -23 289 1 185 256 384 12 chr5 184043067 184043153 -15586997 - L2 LINE L2 -23 3290 3173 382 349 10 26 chr5 184043293 184043485 -15586665 + MLT1K LTR MaLR 313 501 -87 233 299 93 0 chr5 184044263 184044360 -15585790 - MIR SINE MIR -84 178 73 515 359 51 13 chr5 184044456 184044690 -15585460 - MIR SINE MIR 0 262 20 189 194 0 0 chr5 184045644 184045675 -15584475 - MER5B DNA MER1_type -73 105 75 2535 96 0 0 chr5 184045844 184046156 -15583994 + AluSx SINE Alu 1 312 0 2193 131 0 3 chr5 184046683 184046988 -15583162 + AluSq SINE Alu 1 304 -9 325 273 0 73 chr5 184047160 184047270 -15582880 - MIR SINE MIR -159 103 2 2524 72 0 0 chr5 184047281 184047586 -15582564 - AluY SINE Alu -6 305 1 2336 106 0 0 chr5 184048808 184049109 -15581041 - AluSq SINE Alu -12 301 1 284 267 26 60 chr5 184049163 184049279 -15580871 + L2 LINE L2 3160 3271 -1 321 265 12 0 chr5 184049281 184049364 -15580786 + MIR SINE MIR 177 260 -2 2487 88 7 0 chr5 184049791 184050099 -15580051 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr5 184050309 184050330 -15579820 + AT_rich Low_complexity Low_complexity 1 21 0 215 111 0 56 chr5 184050393 184050447 -15579703 + (TTTTTA)n Simple_repeat Simple_repeat 2 52 0 186 71 0 0 chr5 184051171 184051199 -15578951 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 377 188 94 42 chr5 184052841 184052937 -15577213 + MER5A DNA MER1_type 9 109 -80 814 241 85 13 chr5 184054307 184054531 -15575619 + MIR SINE MIR 12 251 -11 229 320 0 27 chr5 184054533 184054608 -15575542 - L2 LINE L2 0 3313 3241 2361 79 3 3 chr5 184054776 184055067 -15575083 - AluSx SINE Alu -21 291 1 1366 116 0 16 chr5 184055283 184055472 -15574678 - AluSq SINE Alu -127 186 1 1388 188 114 31 chr5 184055494 184055856 -15574294 - L1MB7 LINE L1 -14 6166 5728 2383 77 0 7 chr5 184055856 184056153 -15573997 - AluSc SINE Alu -14 295 1 1388 188 114 31 chr5 184056153 184056300 -15573850 - L1MB7 LINE L1 -452 5728 5595 911 284 114 44 chr5 184056300 184056459 -15573691 + L2 LINE L2 2529 2675 -638 2416 77 3 0 chr5 184056459 184056757 -15573393 + AluSg SINE Alu 1 299 -11 911 284 114 44 chr5 184056757 184057350 -15572800 + L2 LINE L2 2675 3313 0 2348 97 3 0 chr5 184057648 184057948 -15572202 + AluSx SINE Alu 1 301 -11 215 240 35 0 chr5 184058022 184058080 -15572070 - L2 LINE L2 -14 3299 3196 330 115 0 0 chr5 184058119 184058171 -15571979 + (TA)n Simple_repeat Simple_repeat 2 53 0 1218 242 33 52 chr5 184058171 184058269 -15571881 + MER113 DNA MER1_type? 47 145 -376 2381 100 0 0 chr5 184058269 184058579 -15571571 + AluSg SINE Alu 1 310 0 1218 242 33 52 chr5 184058579 184058768 -15571382 + MER113 DNA MER1_type? 145 324 -197 2161 126 3 13 chr5 184058768 184059077 -15571073 + AluSx SINE Alu 1 306 -6 1218 242 33 52 chr5 184059077 184059246 -15570904 + MER113 DNA MER1_type? 324 495 -26 2350 116 0 0 chr5 184059297 184059608 -15570542 - AluSx SINE Alu -1 311 1 593 236 0 6 chr5 184059791 184059956 -15570194 + CT-rich Low_complexity Low_complexity 2 165 0 2598 56 0 0 chr5 184060648 184060951 -15569199 + AluY SINE Alu 1 303 -8 463 253 22 101 chr5 184060998 184061107 -15569043 - MIR SINE MIR -40 222 131 2378 93 0 3 chr5 184061107 184061418 -15568732 + AluY SINE Alu 2 311 0 463 253 22 101 chr5 184061418 184061486 -15568664 - MIR SINE MIR -131 131 59 2343 104 0 13 chr5 184061496 184061812 -15568338 - AluSq SINE Alu -1 312 1 1755 185 42 0 chr5 184061991 184062278 -15567872 - AluJo SINE Alu -13 299 1 293 290 159 33 chr5 184063309 184063523 -15566627 + L2 LINE L2 2934 3174 -139 1020 133 0 0 chr5 184064150 184064330 -15565820 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 285 287 170 0 chr5 184064354 184064448 -15565702 + L2 LINE L2 3204 3313 0 892 209 6 11 chr5 184064485 184064667 -15565483 - FRAM SINE Alu 0 176 1 261 0 0 0 chr5 184064892 184064921 -15565229 + (CA)n Simple_repeat Simple_repeat 1 29 0 320 192 0 0 chr5 184064928 184064980 -15565170 + L2 LINE L2 3176 3227 -45 2031 143 0 32 chr5 184065229 184065543 -15564607 - AluSx SINE Alu -8 304 1 471 333 42 6 chr5 184065547 184065712 -15564438 - MIR SINE MIR -71 191 21 513 209 209 13 chr5 184067808 184067961 -15562189 - MER5A DNA MER1_type 0 189 7 2349 94 3 10 chr5 184068124 184068423 -15561727 - AluSx SINE Alu -15 297 1 920 125 9 148 chr5 184069311 184069655 -15560495 + AluSx SINE Alu 1 296 -6 2284 117 10 0 chr5 184070192 184070501 -15559649 + AluSx SINE Alu 1 312 0 357 295 85 0 chr5 184070583 184070712 -15559438 - MER91C DNA MER1_type 0 140 1 211 289 0 0 chr5 184071411 184071456 -15558694 + (ATG)n Simple_repeat Simple_repeat 3 47 0 2339 100 0 13 chr5 184071457 184071758 -15558392 - AluSx SINE Alu -15 297 1 323 289 167 44 chr5 184071764 184071968 -15558182 - MIR SINE MIR 0 262 34 433 207 115 101 chr5 184072179 184072396 -15557754 + MLT1J LTR MaLR 92 311 -200 1540 138 13 0 chr5 184072751 184072975 -15557175 + AluSg/x SINE Alu 80 306 -4 710 203 13 13 chr5 184072978 184073136 -15557014 + MER58B DNA MER1_type 183 340 -1 224 233 50 0 chr5 184073136 184073196 -15556954 + MIR SINE MIR 199 261 -1 345 301 15 37 chr5 184073417 184073440 -15556710 + L2 LINE L2 3171 3193 -120 2158 137 0 0 chr5 184073440 184073747 -15556403 - AluY SINE Alu -4 307 1 345 301 15 37 chr5 184073747 184073859 -15556291 + L2 LINE L2 3193 3303 -10 2418 63 0 3 chr5 184074402 184074712 -15555438 + AluSq SINE Alu 1 309 0 540 0 0 0 chr5 184075554 184075614 -15554536 + (CA)n Simple_repeat Simple_repeat 2 61 0 2615 153 24 2 chr5 184078572 184079022 -15551128 - MER65C LTR ERV1 0 461 2 53 0 0 0 chr5 184080033 184080086 -15550064 + AT_rich Low_complexity Low_complexity 1 53 0 238 221 39 158 chr5 184080169 184080296 -15549854 + MIR SINE MIR 28 139 -69 2449 105 0 6 chr5 184080484 184080798 -15549352 + AluSx SINE Alu 1 312 0 540 0 0 0 chr5 184080800 184080860 -15549290 + (TA)n Simple_repeat Simple_repeat 2 61 0 260 317 67 0 chr5 184080876 184080980 -15549170 + L3 LINE CR1 1248 1358 -219 201 39 0 0 chr5 184081002 184081028 -15549122 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 379 289 46 101 chr5 184081028 184081395 -15548755 - L2 LINE L2 -17 3255 2909 529 257 21 53 chr5 184081726 184081913 -15548237 + L2 LINE L2 2867 3047 -225 1897 129 0 0 chr5 184081975 184082255 -15547895 - AluSx SINE Alu -12 300 21 317 194 11 97 chr5 184082537 184082630 -15547520 + L2 LINE L2 3229 3313 0 321 304 30 60 chr5 184083409 184083610 -15546540 + MLT1K LTR MaLR 141 335 -253 2850 53 8 11 chr5 184083764 184084120 -15546030 + THE1A LTR MaLR 1 355 0 191 267 253 0 chr5 184084368 184084443 -15545707 - L2 LINE L2 -24 3248 3155 2139 96 0 3 chr5 184084461 184084754 -15545396 - AluSc SINE Alu -17 292 1 190 273 9 118 chr5 184085607 184085717 -15544433 + L2 LINE L2 2599 2696 -618 1640 130 112 0 chr5 184085717 184085986 -15544164 - AluJo SINE Alu -13 299 1 597 196 0 45 chr5 184086068 184086180 -15543970 - FLAM_C SINE Alu -34 109 3 209 327 93 23 chr5 184086304 184086518 -15543632 + L2 LINE L2 2829 3057 -215 377 288 52 31 chr5 184086545 184086736 -15543414 + MLT1J2 LTR MaLR 15 209 -241 191 313 102 39 chr5 184086973 184087101 -15543049 + L2 LINE L2 3177 3312 -1 24 0 0 0 chr5 184088250 184088274 -15541876 + AT_rich Low_complexity Low_complexity 1 24 0 626 251 72 11 chr5 184088510 184088712 -15541438 + MIR SINE MIR 21 236 -26 33 56 0 0 chr5 184088712 184088766 -15541384 + AT_rich Low_complexity Low_complexity 1 54 0 326 196 62 52 chr5 184088768 184088865 -15541285 + L1MCa LINE L1 1994 2091 -4335 222 116 42 53 chr5 184088866 184088961 -15541189 + (TATAA)n Simple_repeat Simple_repeat 1 94 0 412 307 75 79 chr5 184089038 184089266 -15540884 + L2 LINE L2 3018 3244 -28 2132 104 10 10 chr5 184092011 184092320 -15537830 - AluSx SINE Alu -3 309 1 428 314 76 31 chr5 184093664 184094021 -15536129 + L1ME4a LINE L1 5707 6079 -42 2113 106 3 13 chr5 184094031 184094333 -15535817 + AluSc SINE Alu 1 299 -10 628 248 61 57 chr5 184094857 184095103 -15535047 - L2 LINE L2 -2 3311 3065 582 268 14 23 chr5 184095774 184095990 -15534160 - MIR SINE MIR -29 233 21 548 254 49 1 chr5 184096347 184096499 -15533651 + MIR SINE MIR 20 180 -62 1792 189 0 0 chr5 184096658 184096970 -15533180 - AluSx SINE Alu 0 312 1 225 0 0 0 chr5 184097950 184097975 -15532175 + (T)n Simple_repeat Simple_repeat 1 25 0 436 293 186 12 chr5 184099966 184100133 -15530017 + MER91A DNA MER1_type 1 196 0 195 100 0 0 chr5 184100659 184100689 -15529461 + (TC)n Simple_repeat Simple_repeat 1 30 0 214 250 0 0 chr5 184101832 184101876 -15528274 - MIR SINE MIR -2 260 217 1957 46 0 4 chr5 184102113 184102352 -15527798 - AluY SINE Alu -13 298 61 270 309 83 77 chr5 184103586 184103767 -15526383 + MIR3 SINE MIR 3 184 -24 1470 166 49 32 chr5 184103960 184104244 -15525906 - AluJo SINE Alu -11 301 13 517 333 16 5 chr5 184106359 184106548 -15523602 + MER117 DNA MER1_type 2 192 -5 795 311 11 32 chr5 184108137 184108417 -15521733 + MER69 DNA AcHobo 150 423 -803 2413 194 67 8 chr5 184108442 184109041 -15521109 + MER69 DNA AcHobo 1893 2526 0 29 47 0 0 chr5 184109481 184109524 -15520626 + AT_rich Low_complexity Low_complexity 1 43 0 246 339 80 77 chr5 184110521 184110872 -15519278 - L2 LINE L2 -1 3271 2920 182 317 37 0 chr5 184111871 184111953 -15518197 + L2 LINE L2 3227 3311 -2 996 302 83 54 chr5 184112172 184113030 -15517120 + L2 LINE L2 2423 3308 -5 181 227 204 0 chr5 184113357 184113401 -15516749 - MER5A DNA MER1_type -1 188 136 518 281 132 28 chr5 184114344 184114562 -15515588 - MIR SINE MIR -15 247 11 459 314 76 18 chr5 184115241 184115464 -15514686 + MIR SINE MIR 20 255 -7 457 289 0 9 chr5 184117097 184117211 -15512939 + MER81 DNA DNA 2 114 0 2095 124 10 0 chr5 184117228 184117534 -15512616 - AluSx SINE Alu -1 311 3 619 203 22 14 chr5 184117541 184117679 -15512471 + MER5B DNA MER1_type 37 175 -3 389 308 96 8 chr5 184117926 184118186 -15511964 + L1ME LINE L1 5381 5663 -458 291 281 18 18 chr5 184118345 184118459 -15511691 + MIR SINE MIR 117 230 -32 850 153 0 29 chr5 184118622 184118759 -15511391 + FLAM_C SINE Alu 1 133 0 249 271 52 52 chr5 184119658 184119850 -15510300 + Charlie7 DNA MER1_type 2421 2612 0 424 299 31 0 chr5 184119859 184119986 -15510164 + MIR SINE MIR 19 149 -59 279 330 174 24 chr5 184120004 184120216 -15509934 + MIR SINE MIR 9 252 -10 249 357 0 0 chr5 184120765 184120835 -15509315 + MIR SINE MIR 79 148 -60 609 285 101 18 chr5 184120878 184121106 -15509044 + MIR SINE MIR 14 260 -2 696 217 83 2 chr5 184121882 184122044 -15508106 - MER5A DNA MER1_type 0 189 7 1371 111 0 0 chr5 184122553 184122743 -15507407 + AluSq SINE Alu 113 302 -11 379 207 46 11 chr5 184123247 184123334 -15506816 + MIR SINE MIR 16 105 -157 1019 279 75 34 chr5 184123554 184123805 -15506345 + MLT1K LTR MaLR 155 394 -194 1912 143 10 0 chr5 184123805 184124112 -15506038 - AluSx SINE Alu -2 310 1 1794 119 0 32 chr5 184124118 184124395 -15505755 - AluSc SINE Alu -21 288 21 1019 279 75 34 chr5 184124395 184124520 -15505630 + MLT1K LTR MaLR 398 554 -34 199 273 76 15 chr5 184124982 184125048 -15505102 + MIR3 SINE MIR 3 72 -136 214 324 21 65 chr5 184125071 184125261 -15504889 + L2 LINE L2 2839 3022 -291 767 315 32 16 chr5 184125265 184125516 -15504634 + MIR SINE MIR 8 262 0 426 333 66 70 chr5 184125517 184125760 -15504390 + L2 LINE L2 3029 3270 -2 215 308 17 51 chr5 184125765 184125803 -15504347 + MIR3 SINE MIR 87 125 -83 2271 88 0 0 chr5 184125803 184126100 -15504050 - AluY SINE Alu -14 297 1 215 308 17 51 chr5 184126100 184126178 -15503972 + MIR3 SINE MIR 125 199 -9 542 299 61 23 chr5 184126198 184126412 -15503738 + L3 LINE CR1 1293 1514 -63 468 35 0 0 chr5 184126811 184126869 -15503281 + (CA)n Simple_repeat Simple_repeat 1 58 0 258 32 0 0 chr5 184126870 184126901 -15503249 + (TC)n Simple_repeat Simple_repeat 2 32 0 1846 157 0 7 chr5 184127191 184127490 -15502660 - AluSx SINE Alu -15 297 1 304 338 84 16 chr5 184127609 184127920 -15502230 - L1ME4a LINE L1 -198 5923 5592 198 279 29 44 chr5 184127956 184128024 -15502126 + L3 LINE CR1 1509 1575 -2 1945 134 0 7 chr5 184128050 184128348 -15501802 - AluJb SINE Alu -10 302 7 381 300 44 25 chr5 184129059 184129219 -15500931 + MIR SINE MIR 29 191 -71 524 230 36 29 chr5 184129489 184129628 -15500522 - MIR SINE MIR 0 262 123 520 223 134 108 chr5 184129652 184129957 -15500193 - MER102b DNA MER1_type -28 313 1 328 247 149 11 chr5 184130099 184130247 -15499903 - MIR SINE MIR -63 145 15 285 328 0 0 chr5 184131225 184131399 -15498751 + (CCCA)n Simple_repeat Simple_repeat 2 175 0 235 227 11 11 chr5 184131445 184131533 -15498617 + (CCCA)n Simple_repeat Simple_repeat 1 88 0 256 324 10 0 chr5 184131547 184131649 -15498501 + (TTCA)n Simple_repeat Simple_repeat 3 105 0 768 206 24 35 chr5 184131878 184132048 -15498102 - MER5B DNA MER1_type -10 168 1 1113 181 43 5 chr5 184132056 184132266 -15497884 + MER20 DNA MER1_type 1 218 -1 482 300 79 39 chr5 184132668 184132948 -15497202 + L2 LINE L2 3022 3312 -1 427 227 143 0 chr5 184132996 184133115 -15497035 - MIR SINE MIR -124 138 3 682 189 176 7 chr5 184133751 184133904 -15496246 - MER5A DNA MER1_type -2 187 9 261 339 39 62 chr5 184134197 184134327 -15495823 - L2 LINE L2 -23 3249 3123 298 287 131 49 chr5 184134358 184134480 -15495670 - L2 LINE L2 0 3272 3141 527 99 22 0 chr5 184134480 184134571 -15495579 + (GGGA)n Simple_repeat Simple_repeat 1 93 0 1948 127 10 23 chr5 184134698 184134823 -15495327 + AluSx SINE Alu 1 126 -186 209 29 0 57 chr5 184134823 184134858 -15495292 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1948 127 10 23 chr5 184134858 184135040 -15495110 + AluSx SINE Alu 126 304 -8 2022 134 3 3 chr5 184135046 184135352 -15494798 + AluSx SINE Alu 1 306 -6 5045 209 21 18 chr5 184136078 184136286 -15493864 + L1M2 LINE L1 1355 1561 -5288 216 0 0 0 chr5 184136286 184136310 -15493840 + (TA)n Simple_repeat Simple_repeat 2 25 0 5045 209 21 18 chr5 184136310 184136649 -15493501 + L1M2 LINE L1 1561 1898 -4951 1678 183 10 0 chr5 184136649 184136955 -15493195 + AluJb SINE Alu 3 311 -1 5045 209 21 18 chr5 184136955 184137607 -15492543 + L1M2 LINE L1 1898 2558 -4291 3358 219 69 70 chr5 184138953 184139789 -15490361 + L1MC5 LINE L1 6614 7449 -512 234 91 0 0 chr5 184139789 184139822 -15490328 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 3358 219 69 70 chr5 184139822 184140276 -15489874 + L1MC5 LINE L1 7449 7902 -59 233 273 23 0 chr5 184140306 184140394 -15489756 + L1MC4 LINE L1 6614 6703 -1339 334 222 74 90 chr5 184140461 184140650 -15489500 + MIR SINE MIR 15 200 -62 869 302 157 18 chr5 184141046 184141486 -15488664 + L2 LINE L2 2808 3308 -5 665 221 21 0 chr5 184142909 184143049 -15487101 + MIR SINE MIR 8 150 -112 435 194 14 0 chr5 184143099 184143170 -15486980 + MER58A DNA MER1_type 1 72 -35 315 98 0 0 chr5 184143170 184143211 -15486939 + Alu SINE Alu 1 41 -259 364 200 64 43 chr5 184143465 184143605 -15486545 + L1ME4a LINE L1 5961 6103 -18 934 131 0 0 chr5 184143727 184143857 -15486293 + FLAM_C SINE Alu 1 130 -13 208 286 0 65 chr5 184144297 184144374 -15485776 + L2 LINE L2 2999 3070 -202 2077 167 14 14 chr5 184144375 184144740 -15485410 + MLT1A1 LTR MaLR 1 365 0 240 239 221 61 chr5 184144772 184144935 -15485215 - MER5A DNA MER1_type 0 189 1 309 366 61 8 chr5 184144975 184145106 -15485044 + L2 LINE L2 3134 3271 -1 210 171 0 0 chr5 184146931 184146966 -15483184 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 521 276 21 36 chr5 184147431 184147623 -15482527 + MIR SINE MIR 6 194 -68 651 81 0 0 chr5 184147623 184147722 -15482428 + (TA)n Simple_repeat Simple_repeat 1 99 0 618 285 131 9 chr5 184148019 184148155 -15481995 + MIR SINE MIR 2 120 -142 246 81 0 0 chr5 184148155 184148192 -15481958 + (ATG)n Simple_repeat Simple_repeat 1 37 0 618 285 131 9 chr5 184148192 184148276 -15481874 + MIR SINE MIR 120 249 -13 555 228 54 33 chr5 184149464 184149648 -15480502 + L1ME3 LINE L1 5896 6083 -79 213 288 18 72 chr5 184149652 184149763 -15480387 + MIR SINE MIR 137 241 -21 2194 102 0 3 chr5 184150508 184150812 -15479338 + AluSg SINE Alu 1 303 -7 609 266 62 66 chr5 184151056 184151297 -15478853 + MIR SINE MIR 23 262 0 2319 103 0 0 chr5 184151661 184151971 -15478179 + AluSx SINE Alu 1 310 -2 520 301 157 0 chr5 184152435 184152588 -15477562 - MER5A DNA MER1_type 0 189 13 235 267 75 58 chr5 184152900 184153020 -15477130 + L2 LINE L2 2246 2367 -947 215 322 41 34 chr5 184153500 184153646 -15476504 + L2 LINE L2 2258 2404 -910 246 146 62 21 chr5 184153793 184153841 -15476309 + MIR SINE MIR 118 167 -95 351 218 18 71 chr5 184153894 184154064 -15476086 - L1MC4 LINE L1 -1 8041 7881 264 242 31 31 chr5 184154066 184154194 -15475956 + (TA)n Simple_repeat Simple_repeat 1 128 0 1103 220 3 37 chr5 184154223 184154519 -15475631 + AluJo SINE Alu 2 287 -15 1099 299 48 11 chr5 184154835 184155393 -15474757 - L2 LINE L2 -76 3237 2660 363 263 110 25 chr5 184155879 184155997 -15474153 + MIR3 SINE MIR 6 133 -75 275 333 94 0 chr5 184156000 184156117 -15474033 - Charlie8 DNA MER1_type -2289 128 1 612 280 17 23 chr5 184156345 184156520 -15473630 - MIR SINE MIR -64 198 25 857 166 55 12 chr5 184156923 184157086 -15473064 + MER5A DNA MER1_type 13 182 -7 408 341 140 0 chr5 184157086 184157265 -15472885 - MIR SINE MIR -30 232 29 363 327 144 40 chr5 184157520 184157924 -15472226 + L2 LINE L2 2827 3272 0 323 271 42 25 chr5 184158196 184158314 -15471836 + MIR3 SINE MIR 2 121 -87 382 258 53 79 chr5 184158911 184159101 -15471049 + MIR SINE MIR 61 245 -17 877 205 33 23 chr5 184159215 184159430 -15470720 - MER20 DNA MER1_type -2 217 1 210 208 21 0 chr5 184160121 184160169 -15469981 + MIR SINE MIR 103 151 -111 184 189 162 0 chr5 184160318 184160355 -15469795 - L2 LINE L2 -266 3047 3005 498 283 80 29 chr5 184160461 184160632 -15469518 - L2 LINE L2 -425 2889 2697 368 94 234 0 chr5 184160632 184160696 -15469454 + MADE1 DNA Mariner 1 79 -1 498 283 80 29 chr5 184160696 184160800 -15469350 - L2 LINE L2 -617 2697 2600 281 123 31 77 chr5 184160793 184160858 -15469292 + MIR SINE MIR 201 262 0 * 365 58 19 0 chr5 184160874 184160926 -15469224 + (TTCC)n Simple_repeat Simple_repeat 4 56 0 2106 117 0 10 chr5 184160932 184161240 -15468910 - AluSx SINE Alu -7 305 1 232 297 85 51 chr5 184162459 184162577 -15467573 + L2 LINE L2 3151 3272 0 216 158 0 0 chr5 184162583 184162621 -15467529 + (TGGA)n Simple_repeat Simple_repeat 4 41 0 1988 126 10 17 chr5 184162760 184163062 -15467088 - AluJb SINE Alu -10 302 3 426 326 22 43 chr5 184163227 184163411 -15466739 + MER5A DNA MER1_type 8 187 -2 433 260 78 26 chr5 184163530 184163684 -15466466 - MIR SINE MIR -6 256 95 772 185 12 19 chr5 184164610 184164772 -15465378 - MER105 DNA DNA 0 204 44 633 221 77 50 chr5 184164772 184164953 -15465197 + MER5A DNA MER1_type 3 188 -1 319 121 0 69 chr5 184164957 184165015 -15465135 - MER105 DNA DNA -150 54 1 265 235 269 7 chr5 184166324 184166473 -15463677 - Charlie7 DNA MER1_type -4 2608 2421 274 280 80 10 chr5 184166541 184166641 -15463509 + L2 LINE L2 3205 3311 -2 715 206 39 13 chr5 184166873 184167028 -15463122 - MER58B DNA MER1_type 0 341 183 705 209 32 6 chr5 184167028 184167186 -15462964 + L1MB1 LINE L1 6003 6164 -25 3429 143 77 37 chr5 184167236 184167863 -15462287 + PABL_A LTR ERV1 1 652 -8 279 180 0 0 chr5 184167869 184167919 -15462231 + L1MA10 LINE L1 6180 6229 -105 385 83 0 0 chr5 184167919 184167967 -15462183 - Alu SINE Alu -254 48 1 574 186 145 47 chr5 184168000 184168172 -15461978 - MER58B DNA MER1_type -152 189 1 375 285 49 24 chr5 184168172 184168295 -15461855 + MIR SINE MIR 17 142 -120 243 0 0 0 chr5 184169617 184169644 -15460506 + (TG)n Simple_repeat Simple_repeat 2 28 0 524 194 0 0 chr5 184169945 184170038 -15460112 - L1MB7 LINE L1 -11 6173 6081 1562 176 0 37 chr5 184170428 184170724 -15459426 - AluJo SINE Alu -27 285 1 182 307 93 27 chr5 184171249 184171324 -15458826 - L3b LINE CR1 -121 1462 1383 297 153 14 153 chr5 184172220 184172292 -15457858 + MER20 DNA MER1_type 1 62 -157 1158 145 0 0 chr5 184172293 184172472 -15457678 - AluSg/x SINE Alu -5 307 129 236 274 0 0 chr5 184172474 184172558 -15457592 - L1MC4 LINE L1 -1344 6698 6615 230 278 0 0 chr5 184172481 184172571 -15457579 + L1MC4 LINE L1 6614 6703 -1339 * 24 67 0 0 chr5 184172785 184172830 -15457320 + AT_rich Low_complexity Low_complexity 1 45 0 539 107 0 0 chr5 184173438 184173513 -15456637 + (G)n Simple_repeat Simple_repeat 1 75 0 659 191 0 59 chr5 184173524 184173660 -15456490 - FLAM_A SINE Alu -4 129 2 1079 125 25 0 chr5 184173660 184173820 -15456330 + MER20 DNA MER1_type 53 216 -3 261 293 81 20 chr5 184173825 184173924 -15456226 + L2 LINE L2 3191 3295 -18 1632 148 0 0 chr5 184174143 184174433 -15455717 + AluSx SINE Alu 35 324 0 582 274 113 84 chr5 184174442 184175189 -15454961 + L2 LINE L2 2218 3063 -209 452 223 11 11 chr5 184175300 184175394 -15454756 - MER91B DNA MER1_type -48 142 49 21 0 0 0 chr5 184176065 184176086 -15454064 + AT_rich Low_complexity Low_complexity 1 21 0 328 262 47 0 chr5 184176109 184176216 -15453934 + MIR SINE MIR 32 143 -119 * 564 309 12 12 chr5 184176208 184176376 -15453774 + L2 LINE L2 3144 3311 -2 288 0 0 0 chr5 184176407 184176439 -15453711 + (T)n Simple_repeat Simple_repeat 1 32 0 237 253 27 13 chr5 184176449 184176524 -15453626 + MIR SINE MIR 179 254 -8 193 29 59 0 chr5 184176953 184176987 -15453163 + (TTTTTG)n Simple_repeat Simple_repeat 3 38 0 1926 113 3 39 chr5 184177807 184178116 -15452034 + AluSq SINE Alu 1 298 -15 22 0 0 0 chr5 184178165 184178187 -15451963 + AT_rich Low_complexity Low_complexity 1 22 0 269 245 25 113 chr5 184178408 184178483 -15451667 + L2 LINE L2 2701 2756 -558 820 159 118 6 chr5 184178483 184178653 -15451497 + MER5A DNA MER1_type 1 189 0 269 245 25 113 chr5 184178653 184178736 -15451414 + L2 LINE L2 2756 2845 -469 669 213 46 52 chr5 184178981 184179155 -15450995 + MER5B DNA MER1_type 1 173 -5 192 323 188 0 chr5 184179189 184179285 -15450865 + L2 LINE L2 3200 3313 0 935 273 19 0 chr5 184180123 184180339 -15449811 - MIR SINE MIR -26 236 17 272 296 14 0 chr5 184180339 184180410 -15449740 - MER81 DNA DNA 0 114 43 549 281 136 25 chr5 184180635 184180870 -15449280 + MIR SINE MIR 2 262 0 487 288 62 44 chr5 184181334 184181565 -15448585 - MIR SINE MIR -21 241 1 1589 236 108 22 chr5 184182079 184182756 -15447394 - L2 LINE L2 -1 3312 2578 521 41 0 14 chr5 184183401 184183474 -15446676 + (TCTA)n Simple_repeat Simple_repeat 4 75 0 394 324 17 28 chr5 184185558 184185734 -15444416 + MIR SINE MIR 89 262 0 403 222 139 28 chr5 184185977 184186121 -15444029 - MER106B DNA MER1_type -1 1058 899 11075 22 1 0 chr5 184186126 184188158 -15441992 + L1PA2 LINE L1 4122 6155 0 2335 94 0 28 chr5 184188179 184188497 -15441653 + AluSp SINE Alu 1 309 -4 214 261 0 0 chr5 184191777 184191823 -15438327 + (CA)n Simple_repeat Simple_repeat 1 46 0 920 258 55 70 chr5 184192328 184192673 -15437477 + MER102b DNA MER1_type 1 340 -1 240 267 17 0 chr5 184193477 184193537 -15436613 + L2 LINE L2 3212 3272 0 436 333 53 13 chr5 184193972 184194200 -15435950 - MIR SINE MIR -21 241 5 2473 77 0 3 chr5 184197636 184197933 -15432217 - AluSq SINE Alu -16 297 2 437 230 178 15 chr5 184197974 184198109 -15432041 - MIR SINE MIR -1 261 105 2131 125 0 0 chr5 184198159 184198465 -15431685 - AluSx SINE Alu 0 306 1 21 0 0 0 chr5 184198558 184198579 -15431571 + AT_rich Low_complexity Low_complexity 1 21 0 300 217 163 0 chr5 184198936 184199028 -15431122 + MER113 DNA MER1_type? 2 108 -413 340 321 69 0 chr5 184199210 184199341 -15430809 - MIR3 SINE MIR -27 181 42 186 322 51 25 chr5 184199545 184199663 -15430487 - L3 LINE CR1 -126 1451 1331 1952 138 32 3 chr5 184201440 184201722 -15428428 - AluSx SINE Alu -22 290 1 1215 214 54 0 chr5 184203396 184203672 -15426478 - MER58B DNA MER1_type -50 291 1 990 211 11 0 chr5 184205767 184205952 -15424198 + MER5A DNA MER1_type 2 188 -1 251 289 19 48 chr5 184206366 184206470 -15423680 - MIR SINE MIR -72 136 36 280 289 99 20 chr5 184208691 184208843 -15421307 - L1MEd LINE L1 -5510 609 446 1794 191 0 7 chr5 184209014 184209323 -15420827 - AluJo SINE Alu -5 307 1 2414 67 0 0 chr5 184209862 184210172 -15419978 + AluY SINE Alu 1 310 0 397 277 6 38 chr5 184213456 184213615 -15416535 + GA-rich Low_complexity Low_complexity 3 156 0 441 266 90 49 chr5 184214233 184214477 -15415673 - MIR SINE MIR -7 255 2 1812 157 60 0 chr5 184214665 184214984 -15415166 + MER44D DNA MER2_type 2 609 0 431 270 63 32 chr5 184216377 184216566 -15413584 - MER117 DNA MER1_type -2 195 1 24 67 0 0 chr5 184216862 184216907 -15413243 + AT_rich Low_complexity Low_complexity 1 45 0 552 24 0 47 chr5 184216907 184216992 -15413158 + (TTCC)n Simple_repeat Simple_repeat 4 84 0 800 260 206 9 chr5 184217304 184217527 -15412623 - MLT2F LTR ERVL -328 335 69 2373 92 3 0 chr5 184217547 184217842 -15412308 - AluSx SINE Alu -16 296 1 353 269 139 15 chr5 184218513 184218714 -15411436 + MIR SINE MIR 13 238 -24 213 39 0 0 chr5 184219506 184219532 -15410618 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1650 175 0 11 chr5 184219534 184219819 -15410331 - AluJb SINE Alu -30 282 1 328 290 105 49 chr5 184220197 184220280 -15409870 + L1MC/D LINE L1 4923 5000 -1270 2551 81 40 0 chr5 184220280 184220628 -15409522 + L1PA13 LINE L1 5799 6160 -3 328 290 105 49 chr5 184220628 184221128 -15409022 + L1MC/D LINE L1 5000 5526 -744 206 290 54 21 chr5 184222220 184222313 -15407837 + L2 LINE L2 3188 3283 -30 * 433 280 45 66 chr5 184222285 184222528 -15407622 + MIR SINE MIR 9 246 -16 198 103 0 0 chr5 184222787 184222816 -15407334 + (A)n Simple_repeat Simple_repeat 1 29 0 369 242 225 0 chr5 184223125 184223245 -15406905 - MER5A DNA MER1_type -8 181 35 * 414 191 117 0 chr5 184223243 184223337 -15406813 + MER5A DNA MER1_type 84 188 -1 336 314 82 6 chr5 184223374 184223533 -15406617 + MIR SINE MIR 92 262 0 346 293 0 9 chr5 184224210 184224316 -15405834 + MIR SINE MIR 80 184 -78 589 273 56 35 chr5 184224327 184224558 -15405592 - MIR SINE MIR -21 241 6 229 262 16 0 chr5 184224610 184224671 -15405479 + CT-rich Low_complexity Low_complexity 1 62 0 235 314 13 58 chr5 184225252 184225408 -15404742 + MER5A DNA MER1_type 7 155 -34 231 88 0 0 chr5 184225773 184225807 -15404343 + (TC)n Simple_repeat Simple_repeat 1 34 0 1509 188 4 0 chr5 184225812 184226073 -15404077 - AluSq SINE Alu -51 262 1 736 208 43 14 chr5 184226269 184226476 -15403674 + MIR SINE MIR 38 250 -12 225 0 0 0 chr5 184226483 184226508 -15403642 + (ATG)n Simple_repeat Simple_repeat 2 26 0 2177 177 48 16 chr5 184227297 184227738 -15402412 - MER88 LTR ERVL -8 456 2 206 370 17 8 chr5 184227865 184227984 -15402166 + L2 LINE L2 3153 3272 0 2041 133 3 10 chr5 184228523 184228858 -15401292 + AluSx SINE Alu 1 312 0 211 191 0 0 chr5 184229119 184229161 -15400989 + (CA)n Simple_repeat Simple_repeat 1 42 0 1545 235 97 18 chr5 184229196 184229638 -15400512 + L1MD3 LINE L1 7511 7987 -8 2561 33 7 3 chr5 184229659 184229964 -15400186 + L1PA4 LINE L1 5848 6153 -2 208 340 39 0 chr5 184229964 184230067 -15400083 + MIR SINE MIR 153 259 -3 2325 100 3 0 chr5 184230476 184230776 -15399374 + AluSp SINE Alu 2 302 -11 248 286 19 19 chr5 184230812 184230917 -15399233 - MER113 DNA MER1_type? -411 110 6 2227 47 0 7 chr5 184231894 184231907 -15398243 + L1P LINE L1 4198 4210 -1936 5762 48 3 54 chr5 184231907 184232672 -15397478 - L1PA7 LINE L1 0 6154 5429 2227 47 0 7 chr5 184232672 184232932 -15397218 + L1P LINE L1 4210 4469 -1677 628 263 115 10 chr5 184233335 184233544 -15396606 - MIR SINE MIR -18 244 14 289 263 204 0 chr5 184233548 184233632 -15396518 - MER112 DNA MER1_type -5 255 189 2183 132 7 0 chr5 184233632 184233936 -15396214 + AluSx SINE Alu 1 306 -6 289 263 204 0 chr5 184233936 184234003 -15396147 - MER112 DNA MER1_type -71 189 73 207 152 0 0 chr5 184234018 184234064 -15396086 + (TG)n Simple_repeat Simple_repeat 1 46 0 233 239 155 102 chr5 184234904 184235097 -15395053 - MER102b DNA MER1_type -1087 341 129 1925 137 18 7 chr5 184235097 184235216 -15394934 + AluSx SINE Alu 8 124 -188 276 30 0 0 chr5 184235216 184235249 -15394901 + (CA)n Simple_repeat Simple_repeat 2 34 0 1925 137 18 7 chr5 184235249 184235443 -15394707 + AluSx SINE Alu 124 312 0 233 239 155 102 chr5 184235443 184235513 -15394637 - MER102b DNA MER1_type -1299 129 64 2399 210 23 33 chr5 184236582 184237102 -15393048 + LTR40a LTR ERVL 1 515 -4 735 289 124 52 chr5 184237117 184237593 -15392557 - L2 LINE L2 -18 3295 2793 3609 120 6 0 chr5 184237593 184238083 -15392067 - MER1A DNA MER1_type 0 529 37 1183 127 6 0 chr5 184238075 184238240 -15391910 + MER1A DNA MER1_type 196 361 -168 * 191 302 0 0 chr5 184238748 184238791 -15391359 + L2 LINE L2 3262 3304 -9 354 173 0 0 chr5 184238791 184238866 -15391284 + (TG)n Simple_repeat Simple_repeat 1 75 0 558 320 66 22 chr5 184239739 184239967 -15390183 + MIR SINE MIR 13 250 -12 1270 190 14 5 chr5 184240320 184240541 -15389609 - MER58A DNA MER1_type -1 223 1 292 136 20 0 chr5 184240915 184240972 -15389178 - MIR SINE MIR -67 141 92 222 300 0 12 chr5 184241183 184241263 -15388887 + MIR SINE MIR 109 187 -75 566 239 159 6 chr5 184241682 184241858 -15388292 - MIR SINE MIR -44 218 16 297 179 54 0 chr5 184242501 184242557 -15387593 + MER46C DNA MER2_type 6 64 -274 440 62 0 15 chr5 184242563 184242628 -15387522 + (TG)n Simple_repeat Simple_repeat 1 64 0 440 273 30 23 chr5 184242648 184242780 -15387370 + MER46C DNA MER2_type 204 336 -2 476 219 148 0 chr5 184242896 184243024 -15387126 + MIR SINE MIR 108 254 -8 534 316 0 53 chr5 184243040 184243230 -15386920 - MIR SINE MIR -64 198 19 444 323 73 17 chr5 184243423 184243723 -15386427 - L2 LINE L2 -559 2755 2439 459 294 129 15 chr5 184244057 184244258 -15385892 + MIR SINE MIR 18 241 -21 403 237 68 8 chr5 184245011 184245129 -15385021 + L2 LINE L2 3104 3228 -85 2253 117 0 3 chr5 184245212 184245520 -15384630 - AluSg SINE Alu -3 307 1 312 331 136 6 chr5 184247636 184247805 -15382345 - MIR SINE MIR -19 243 53 611 284 26 5 chr5 184248149 184248343 -15381807 + L2 LINE L2 2873 3070 -243 4791 126 21 30 chr5 184248353 184249100 -15381050 + L1PA16 LINE L1 5417 6157 -9 41916 65 5 6 chr5 184249265 184255418 -15374732 + L1PA6 LINE L1 7 6153 -1 452 224 10 20 chr5 184255424 184255522 -15374628 + L2 LINE L2 3216 3312 -1 659 182 267 6 chr5 184255692 184255868 -15374282 - MIR SINE MIR -10 252 31 653 218 30 8 chr5 184256147 184256280 -15373870 - L2 LINE L2 0 3313 3178 2143 110 0 0 chr5 184256323 184256653 -15373497 + AluSg SINE Alu 1 330 0 1288 210 48 46 chr5 184256665 184256768 -15373382 + L1ME2 LINE L1 5734 5835 -329 2997 71 3 11 chr5 184256768 184257135 -15373015 + THE1B LTR MaLR 1 364 0 1288 210 48 46 chr5 184257135 184257426 -15372724 + L1ME2 LINE L1 5835 6129 -35 3684 64 4 2 chr5 184257429 184257883 -15372267 + L1PB1 LINE L1 5693 6147 -4 450 247 161 8 chr5 184257938 184258181 -15371969 - L2 LINE L2 -189 3124 2845 283 316 71 0 chr5 184258234 184258332 -15371818 - L2 LINE L2 -18 3295 3191 194 295 8 66 chr5 184258328 184258450 -15371700 - L2 LINE L2 -524 2790 2676 * 244 253 154 0 chr5 184258867 184258958 -15371192 + L2 LINE L2 3160 3264 -8 220 354 21 35 chr5 184259417 184259561 -15370589 + L2 LINE L2 2950 3091 -181 310 302 178 6 chr5 184260067 184260236 -15369914 - MIR SINE MIR -63 199 2 185 247 370 0 chr5 184260295 184260376 -15369774 + L2 LINE L2 3203 3313 0 248 270 34 29 chr5 184260866 184261018 -15369132 + MIR SINE MIR 64 251 -11 321 304 17 0 chr5 184261069 184261184 -15368966 + L1ME4a LINE L1 5613 5729 -392 334 225 135 40 chr5 184261185 184261407 -15368743 + L1ME4a LINE L1 5758 6000 -121 667 271 34 20 chr5 184261559 184261785 -15368365 - MIR SINE MIR -26 236 7 287 64 0 43 chr5 184261838 184261885 -15368265 + (TTTCC)n Simple_repeat Simple_repeat 4 48 0 1370 206 20 30 chr5 184261915 184262329 -15367821 - AluJb SINE Alu 0 411 1 21 57 0 0 chr5 184262343 184262378 -15367772 + AT_rich Low_complexity Low_complexity 1 35 0 293 256 0 13 chr5 184262654 184262732 -15367418 - HsTC2 DNA Tc2 -1819 79 3 467 253 73 20 chr5 184263155 184263305 -15366845 + MIR SINE MIR 105 262 0 282 29 0 0 chr5 184263958 184263993 -15366157 + (CA)n Simple_repeat Simple_repeat 2 36 0 204 258 0 16 chr5 184264253 184264315 -15365835 + (TA)n Simple_repeat Simple_repeat 1 61 0 266 250 34 74 chr5 184266212 184266360 -15363790 + L1ME LINE L1 5461 5602 -519 607 290 98 66 chr5 184266435 184266716 -15363434 + MLT1I LTR MaLR 7 302 -107 1004 194 26 66 chr5 184266716 184266943 -15363207 - MER20 DNA MER1_type 0 219 2 607 290 98 66 chr5 184266943 184266996 -15363154 + MLT1I LTR MaLR 302 352 -57 22 35 0 0 chr5 184267036 184267065 -15363085 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr5 184267187 184267225 -15362925 + AT_rich Low_complexity Low_complexity 1 38 0 307 306 18 0 chr5 184267394 184267505 -15362645 - MIR SINE MIR -73 135 18 324 0 0 0 chr5 184268844 184268880 -15361270 + (TGGA)n Simple_repeat Simple_repeat 1 36 0 633 275 39 0 chr5 184269024 184269206 -15360944 + MER117 DNA MER1_type 3 191 -6 3145 179 68 12 chr5 184269860 184270503 -15359647 - L1MB7 LINE L1 -64 6120 5442 269 207 0 0 chr5 184271564 184271622 -15358528 + MIR SINE MIR 95 152 -110 216 280 40 13 chr5 184272001 184272076 -15358074 + MIR3 SINE MIR 111 187 -21 1651 150 0 78 chr5 184272397 184272730 -15357420 - AluJb SINE Alu -4 308 2 597 293 137 9 chr5 184272793 184273005 -15357145 + MIR SINE MIR 3 241 -21 558 294 50 27 chr5 184273813 184274034 -15356116 + MIR SINE MIR 35 260 -2 222 309 89 16 chr5 184274428 184274551 -15355599 + L2 LINE L2 3140 3271 -1 2401 124 30 50 chr5 184274649 184275013 -15355137 + LTR18A LTR ERVL 1 357 0 31 0 0 0 chr5 184275025 184275056 -15355094 + AT_rich Low_complexity Low_complexity 1 31 0 186 43 0 0 chr5 184275157 184275180 -15354970 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 243 79 0 0 chr5 184275488 184275526 -15354624 + (TG)n Simple_repeat Simple_repeat 2 39 0 3541 155 48 10 chr5 184275798 184276378 -15353772 - MER7C DNA MER2_type 0 602 1 298 221 15 0 chr5 184276378 184276446 -15353704 - L1MC4 LINE L1 -298 7744 7676 439 200 45 27 chr5 184276940 184277050 -15353100 + MIR SINE MIR 34 145 -117 476 304 6 25 chr5 184278873 184279034 -15351116 - MIR SINE MIR -103 159 2 1416 191 151 3 chr5 184279046 184279344 -15350806 + MER2 DNA MER2_type 1 342 -2 241 174 0 0 chr5 184280373 184280419 -15349731 + LTR66 LTR ERVL 394 439 -171 2122 73 36 14 chr5 184280446 184280721 -15349429 - AluY SINE Alu -30 281 1 804 163 0 22 chr5 184280722 184280857 -15349293 - AluJo SINE Alu -178 134 3 471 385 64 0 chr5 184280959 184281177 -15348973 - MIR SINE MIR -3 259 28 1179 206 22 22 chr5 184281353 184281576 -15348574 - MER58A DNA MER1_type -1 223 1 2003 121 4 4 chr5 184282735 184283045 -15347105 + AluSx SINE Alu 2 311 0 1012 225 28 9 chr5 184283556 184283769 -15346381 - MER20 DNA MER1_type -2 217 1 306 138 0 0 chr5 184284927 184284985 -15345165 + (CTG)n Simple_repeat Simple_repeat 3 60 0 27 0 0 0 chr5 184287095 184287122 -15343028 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr5 184287554 184287576 -15342574 + AT_rich Low_complexity Low_complexity 1 22 0 1941 61 16 16 chr5 184288454 184288699 -15341451 - AluY SINE Alu -62 249 5 346 220 156 0 chr5 184288704 184288813 -15341337 - MIR SINE MIR -15 247 122 589 263 12 6 chr5 184289058 184289218 -15340932 + MLT1I LTR MaLR 248 408 -1 758 191 0 0 chr5 184289448 184289574 -15340576 + FLAM_C SINE Alu 1 126 -17 460 315 115 29 chr5 184291051 184291365 -15338785 - L2 LINE L2 -7 3306 2966 557 300 0 6 chr5 184291536 184291696 -15338454 - MIR SINE MIR -101 161 3 215 274 0 0 chr5 184294171 184294222 -15335928 + MIR SINE MIR 89 139 -69 * 518 239 39 19 chr5 184294221 184294376 -15335774 - MIR SINE MIR -1 261 104 464 268 232 0 chr5 184294572 184294770 -15335380 - MIR SINE MIR -1 261 18 470 264 30 51 chr5 184294914 184295111 -15335039 - MIR3 SINE MIR -14 194 2 908 132 7 0 chr5 184296049 184296201 -15333949 + (TA)n Simple_repeat Simple_repeat 1 153 0 2379 67 11 0 chr5 184296201 184296486 -15333664 - AluSq SINE Alu -21 292 5 330 303 9 0 chr5 184296916 184297025 -15333125 - MIR SINE MIR -66 196 87 999 138 96 46 chr5 184297287 184297328 -15332822 - Charlie5 DNA MER1_type 0 2624 2586 2020 124 38 0 chr5 184297328 184297619 -15332531 - AluSx SINE Alu -10 302 1 999 138 96 46 chr5 184297619 184297837 -15332313 - Charlie5 DNA MER1_type -37 2587 2352 353 248 200 0 chr5 184297835 184297960 -15332190 - Charlie5 DNA MER1_type -2412 200 51 * 1306 186 3 118 chr5 184298046 184298395 -15331755 - AluSx SINE Alu -3 309 1 1082 117 35 23 chr5 184298487 184298658 -15331492 - AluSg/x SINE Alu -13 299 127 248 130 0 0 chr5 184298662 184298708 -15331442 + LTR66 LTR ERVL 394 439 -171 465 133 0 0 chr5 184298710 184298785 -15331365 + (TA)n Simple_repeat Simple_repeat 1 75 0 2117 110 0 17 chr5 184298785 184299075 -15331075 - AluSx SINE Alu -27 285 1 181 290 29 14 chr5 184299146 184299215 -15330935 + L2 LINE L2 3244 3313 0 417 235 52 3 chr5 184299364 184299491 -15330659 - MIR SINE MIR -62 146 38 935 138 0 6 chr5 184300778 184300791 -15329359 + (TCCC)n Simple_repeat Simple_repeat 1 178 0 935 138 0 6 chr5 184300791 184300958 -15329192 + (TCCC)n Simple_repeat Simple_repeat 3 168 0 424 299 7 7 chr5 184301025 184301179 -15328971 + MIR SINE MIR 108 261 -1 340 248 71 26 chr5 184301917 184302030 -15328120 - L2 LINE L2 -5 3267 3150 955 190 16 0 chr5 184302032 184302216 -15327934 + MER5A DNA MER1_type 1 187 -2 261 0 0 0 chr5 184302438 184302467 -15327683 + (A)n Simple_repeat Simple_repeat 1 29 0 1622 179 123 3 chr5 184303329 184303653 -15326497 + MLT1A1 LTR MaLR 1 363 -2 231 176 99 121 chr5 184303717 184303808 -15326342 - MLT1K LTR MaLR -285 303 215 444 121 340 28 chr5 184303926 184304067 -15326083 + MER53 DNA DNA 4 188 -1 831 262 9 9 chr5 184305818 184306047 -15324103 - MIR SINE MIR -14 248 20 299 283 9 0 chr5 184308553 184308666 -15321484 + (TA)n Simple_repeat Simple_repeat 1 114 0 308 298 33 8 chr5 184310366 184310487 -15319663 + L2 LINE L2 3190 3313 0 255 321 98 9 chr5 184310574 184310686 -15319464 + MIR SINE MIR 71 192 -70 267 329 65 77 chr5 184313512 184313852 -15316298 + L2 LINE L2 2937 3272 0 751 299 25 4 chr5 184315683 184315924 -15314226 - MIR SINE MIR -8 254 9 319 325 49 16 chr5 184316048 184316171 -15313979 + MIR SINE MIR 23 149 -113 729 213 46 0 chr5 184316364 184316538 -15313612 + MIR SINE MIR 71 252 -10 365 295 139 17 chr5 184316644 184316817 -15313333 + MIR SINE MIR 68 261 -1 281 351 23 0 chr5 184317188 184317319 -15312831 + MIR SINE MIR 20 153 -109 226 164 137 55 chr5 184317410 184317483 -15312667 - LTR68 LTR ERV1 -463 277 199 688 321 58 4 chr5 184318175 184318418 -15311732 + MIR SINE MIR 3 258 -4 1490 225 115 28 chr5 184318470 184318896 -15311254 + MLT1C LTR MaLR 5 467 0 2171 113 0 0 chr5 184318989 184319303 -15310847 - AluSx SINE Alu 0 314 1 512 254 61 108 chr5 184319438 184319833 -15310317 + MLT1L LTR MaLR 196 476 -35 1869 167 0 16 chr5 184319952 184320264 -15309886 - AluJo SINE Alu -5 307 1 248 333 44 30 chr5 184320564 184320699 -15309451 + MIR SINE MIR 2 138 -124 924 210 47 4 chr5 184321113 184321297 -15308853 - MER20 DNA MER1_type 0 219 30 183 240 47 108 chr5 184324673 184324802 -15305348 - MIR SINE MIR -93 169 49 2279 95 3 7 chr5 184325196 184325501 -15304649 + AluSx SINE Alu 1 304 -8 369 0 0 0 chr5 184328065 184328106 -15302044 + (TG)n Simple_repeat Simple_repeat 1 41 0 360 0 0 0 chr5 184329277 184329317 -15300833 + (TG)n Simple_repeat Simple_repeat 2 41 0 203 250 0 0 chr5 184331558 184331610 -15298540 - L2 LINE L2 0 3313 3262 285 286 0 22 chr5 184331752 184331843 -15298307 + HsTC2 DNA Tc2 1 89 -1809 438 241 68 8 chr5 184331911 184332044 -15298106 + HsTC2 DNA Tc2 1749 1889 -9 341 291 8 16 chr5 184332100 184332227 -15297923 - MIR SINE MIR -112 150 25 1242 252 52 18 chr5 184334805 184335134 -15295016 + MER58B DNA MER1_type 1 340 -1 256 275 83 33 chr5 184335372 184335492 -15294658 + MIR SINE MIR 19 144 -64 1988 123 0 27 chr5 184335585 184335904 -15294246 + AluSx SINE Alu 1 311 0 182 268 87 79 chr5 184336860 184336987 -15293163 - MIR SINE MIR -46 216 89 649 92 31 0 chr5 184340027 184340125 -15290025 - L1PA15 LINE L1 -13 6152 6052 555 170 11 0 chr5 184340125 184340219 -15289931 + L1PA13 LINE L1 5771 5865 -298 27 0 0 0 chr5 184340295 184340322 -15289828 + AT_rich Low_complexity Low_complexity 1 27 0 2601 95 9 3 chr5 184340347 184340693 -15289457 - L1PB2 LINE L1 0 6151 5804 180 299 21 72 chr5 184341205 184341302 -15288848 + L2 LINE L2 3191 3282 -31 195 42 0 0 chr5 184341312 184341336 -15288814 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 506 219 50 6 chr5 184341440 184341570 -15288580 - MIR SINE MIR -14 248 112 326 248 8 77 chr5 184342045 184342162 -15287988 + MIR SINE MIR 77 185 -77 339 78 0 0 chr5 184343314 184343365 -15286785 + (TC)n Simple_repeat Simple_repeat 2 52 0 232 282 134 35 chr5 184343455 184343597 -15286553 + L2 LINE L2 3117 3272 0 824 289 99 34 chr5 184343786 184344349 -15285801 + L2 LINE L2 2695 3311 -2 2017 115 31 7 chr5 184345003 184345291 -15284859 + AluSq SINE Alu 1 295 -18 187 318 0 0 chr5 184345298 184345342 -15284808 + MER5A DNA MER1_type 140 183 -6 457 229 56 34 chr5 184345466 184345645 -15284505 + L1MC4 LINE L1 7860 8042 0 2013 147 3 0 chr5 184347955 184348248 -15281902 - AluSg SINE Alu -16 294 1 550 308 120 0 chr5 184348433 184348641 -15281509 + MIR SINE MIR 18 250 -12 239 283 111 50 chr5 184348657 184348756 -15281394 + L2 LINE L2 3168 3272 0 426 347 41 21 chr5 184349913 184350155 -15279995 + MIR SINE MIR 5 251 -11 420 338 176 11 chr5 184350216 184350574 -15279576 - L2 LINE L2 -11 3261 2845 2129 109 29 26 chr5 184350613 184350925 -15279225 - AluSq SINE Alu 0 313 1 424 237 43 43 chr5 184351166 184351305 -15278845 + L2 LINE L2 2304 2442 -872 962 278 33 40 chr5 184351323 184351722 -15278428 - LTR16A LTR ERVL -39 411 16 465 272 88 106 chr5 184351747 184352594 -15277556 + L2 LINE L2 2462 3312 -1 2932 158 17 49 chr5 184353808 184354384 -15275766 - L1MB5 LINE L1 0 6174 5617 2201 176 49 2 chr5 184354388 184354798 -15275352 - MSTB1 LTR MaLR 0 432 4 3708 112 9 17 chr5 184355280 184355815 -15274335 - L1PA15 LINE L1 -1 6164 5634 188 286 54 0 chr5 184356338 184356394 -15273756 - MIR3 SINE MIR -49 159 101 209 182 0 0 chr5 184356472 184356505 -15273645 + polypurine Low_complexity Low_complexity 2 34 0 209 197 30 61 chr5 184357733 184357799 -15272351 + GA-rich Low_complexity Low_complexity 3 66 0 441 343 81 0 chr5 184357891 184358089 -15272061 + MIR SINE MIR 49 262 0 979 140 0 11 chr5 184358316 184358494 -15271656 + (TTCC)n Simple_repeat Simple_repeat 2 177 0 197 305 146 78 chr5 184358692 184359102 -15271048 + L2 LINE L2 2834 3271 -1 1035 255 27 39 chr5 184359830 184360167 -15269983 + L1MC4a LINE L1 5574 5906 -1902 231 331 40 27 chr5 184360530 184360678 -15269472 + MIR3 SINE MIR 44 193 -15 2275 102 0 0 chr5 184360730 184361063 -15269087 - AluSx SINE Alu 0 333 1 425 183 0 8 chr5 184361209 184361329 -15268821 + CT-rich Low_complexity Low_complexity 2 120 0 437 273 33 49 chr5 184362577 184362760 -15267390 + MLT1K LTR MaLR 147 326 -262 214 333 70 31 chr5 184362925 184362965 -15267185 + MIR SINE MIR 117 154 -108 2807 72 5 30 chr5 184362965 184363338 -15266812 - THE1B LTR MaLR 0 364 1 214 333 70 31 chr5 184363338 184363426 -15266724 + MIR SINE MIR 154 250 -12 31 0 0 0 chr5 184363880 184363911 -15266239 + AT_rich Low_complexity Low_complexity 1 31 0 513 322 75 13 chr5 184366592 184366831 -15263319 + MIR SINE MIR 2 255 -7 957 236 0 0 chr5 184366885 184367050 -15263100 - FRAM SINE Alu -1 165 1 561 333 106 50 chr5 184367201 184367682 -15262468 + L2 LINE L2 2327 2834 -480 419 305 203 35 chr5 184367751 184368007 -15262143 + L2 LINE L2 2974 3272 0 321 307 66 22 chr5 184369410 184369547 -15260603 + L2 LINE L2 3161 3303 -10 2607 114 16 5 chr5 184369568 184369937 -15260213 + THE1C LTR MaLR 3 375 0 445 260 65 26 chr5 184370707 184370861 -15259289 + MIR SINE MIR 79 238 -24 32818 105 9 56 chr5 184371321 184373054 -15257096 + L1PA7 LINE L1 12 1825 -4329 1936 59 0 4 chr5 184373054 184373290 -15256860 + AluY SINE Alu 74 308 -3 32818 105 9 56 chr5 184373290 184378007 -15252143 + L1PA7 LINE L1 1825 6150 -4 261 128 0 0 chr5 184378002 184378041 -15252109 - L1PA15 LINE L1 -112 6053 6015 * 282 219 70 44 chr5 184378087 184378201 -15251949 - L1MC5 LINE L1 -292 7669 7553 351 60 0 0 chr5 184378256 184378306 -15251844 + (TG)n Simple_repeat Simple_repeat 1 50 0 620 251 119 40 chr5 184380338 184380565 -15249585 - MER102b DNA MER1_type -14 327 83 312 265 0 0 chr5 184380572 184380670 -15249480 + (TATATG)n Simple_repeat Simple_repeat 3 100 0 601 294 47 9 chr5 184382722 184382933 -15247217 + MIR SINE MIR 7 225 -37 294 297 70 16 chr5 184383106 184383234 -15246916 + Charlie8 DNA MER1_type 75 209 -2208 519 299 39 14 chr5 184384981 184385188 -15244962 + MIR SINE MIR 51 262 0 677 272 7 14 chr5 184385581 184385794 -15244356 - MIR SINE MIR -18 244 33 428 242 111 59 chr5 184386944 184387097 -15243053 - MIR SINE MIR -3 259 99 217 325 89 49 chr5 184387208 184387331 -15242819 + L2 LINE L2 3116 3243 -29 192 77 0 0 chr5 184387334 184387360 -15242790 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 1417 157 42 19 chr5 184387617 184387879 -15242271 - L1MB7 LINE L1 0 6184 5917 203 156 0 0 chr5 184389512 184389544 -15240606 + (CA)n Simple_repeat Simple_repeat 1 32 0 414 255 138 0 chr5 184390076 184390221 -15239929 + MIR SINE MIR 98 262 0 2269 106 0 3 chr5 184390245 184390548 -15239602 - AluSx SINE Alu -10 302 1 1816 159 0 30 chr5 184390613 184390909 -15239241 - AluJo SINE Alu -25 287 1 615 274 29 17 chr5 184391551 184391726 -15238424 - L2 LINE L2 -243 3070 2894 707 300 191 8 chr5 184391821 184392188 -15237962 + L2 LINE L2 2878 3311 -2 2039 147 66 12 chr5 184393017 184393337 -15236813 + MER1B DNA MER1_type 1 337 0 2011 91 0 4 chr5 184393512 184393766 -15236384 - AluSc SINE Alu -14 295 43 190 244 0 0 chr5 184393826 184393871 -15236279 - L2 LINE L2 -1 3312 3268 1763 239 51 89 chr5 184394967 184395274 -15234876 + L1ME1 LINE L1 5518 5835 -331 1372 103 10 0 chr5 184395274 184395478 -15234672 + L1MA8 LINE L1 6082 6287 -4 1763 239 51 89 chr5 184395478 184395841 -15234309 + L1ME1 LINE L1 5835 6162 -4 438 229 45 67 chr5 184398538 184398717 -15231433 - MIR SINE MIR 0 262 88 562 225 182 43 chr5 184399612 184399799 -15230351 + MER58C DNA MER1_type 3 215 0 202 152 43 0 chr5 184399891 184399937 -15230213 + (TATG)n Simple_repeat Simple_repeat 1 48 0 198 71 0 0 chr5 184401080 184401108 -15229042 + (T)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr5 184401880 184401901 -15228249 + AT_rich Low_complexity Low_complexity 1 21 0 1121 169 5 43 chr5 184401959 184402205 -15227945 + AluJo SINE Alu 84 321 0 260 411 48 16 chr5 184403031 184403155 -15226995 - L2 LINE L2 -8 3264 3137 889 170 0 7 chr5 184403380 184403668 -15226482 + CT-rich Low_complexity Low_complexity 1 286 0 2179 127 0 6 chr5 184403711 184404025 -15226125 - AluSx SINE Alu 0 312 1 192 179 0 0 chr5 184404513 184404552 -15225598 + GA-rich Low_complexity Low_complexity 2 40 0 23 0 0 0 chr5 184405612 184405635 -15224515 + AT_rich Low_complexity Low_complexity 1 23 0 1032 191 0 0 chr5 184405670 184405858 -15224292 - L1MD1 LINE L1 -2 6240 6053 225 182 0 192 chr5 184405826 184405872 -15224278 - L1MD2 LINE L1 -273 6086 6033 * 414 0 0 0 chr5 184405872 184405918 -15224232 + (TG)n Simple_repeat Simple_repeat 1 46 0 2000 115 0 7 chr5 184405920 184406199 -15223951 - AluSx SINE Alu -35 277 1 225 182 0 192 chr5 184406199 184406248 -15223902 - L1MD2 LINE L1 -327 6032 6007 21 0 0 0 chr5 184406320 184406341 -15223809 + AT_rich Low_complexity Low_complexity 1 21 0 4767 100 2 0 chr5 184406514 184407143 -15223007 - L1PA14 LINE L1 0 6161 5532 2812 222 46 12 chr5 184407143 184407811 -15222339 - L1ME2 LINE L1 -46 6118 5428 338 318 20 47 chr5 184408860 184409008 -15221142 + MIR SINE MIR 60 203 -59 2078 119 27 3 chr5 184409301 184409595 -15220555 - AluSx SINE Alu -11 301 1 220 282 65 24 chr5 184409856 184409980 -15220170 - L2 LINE L2 -225 3047 2919 447 306 78 16 chr5 184410689 184410882 -15219268 + MIR SINE MIR 58 262 0 26 0 0 0 chr5 184410889 184410915 -15219235 + AT_rich Low_complexity Low_complexity 1 26 0 282 264 14 0 chr5 184411066 184411138 -15219012 - MER5A DNA MER1_type -113 76 4 281 263 68 42 chr5 184411993 184412081 -15218069 + L2 LINE L2 3193 3277 -36 450 0 0 0 chr5 184412081 184412131 -15218019 + (TG)n Simple_repeat Simple_repeat 1 50 0 1962 88 3 85 chr5 184412131 184412436 -15217714 - AluSq SINE Alu -33 280 1 281 263 68 42 chr5 184412436 184412464 -15217686 + L2 LINE L2 3276 3313 0 210 264 38 0 chr5 184414561 184414614 -15215536 - MIR SINE MIR -10 252 198 249 113 16 32 chr5 184414657 184414719 -15215431 + (TAA)n Simple_repeat Simple_repeat 2 62 0 183 261 43 0 chr5 184414919 184414965 -15215185 + L2 LINE L2 3141 3188 -84 * 269 319 126 4 chr5 184414956 184415144 -15215006 - MIR SINE MIR -32 230 7 189 202 162 71 chr5 184415372 184415471 -15214679 + MIR SINE MIR 31 138 -124 219 292 0 0 chr5 184416518 184416583 -15213567 + MIR SINE MIR 188 252 -10 * 556 263 46 17 chr5 184416538 184416713 -15213437 - MIR SINE MIR -16 246 67 1909 165 102 73 chr5 184417523 184417602 -15212548 + MLT1D LTR MaLR 1 76 -429 2079 191 34 36 chr5 184417602 184418068 -15212082 + MLT1C LTR MaLR 1 465 -2 1909 165 102 73 chr5 184418068 184418479 -15211671 + MLT1D LTR MaLR 76 505 0 598 305 19 14 chr5 184418656 184418866 -15211284 - MIR SINE MIR -8 254 44 329 357 18 0 chr5 184420113 184420225 -15209925 - L2 LINE L2 0 3272 3159 3010 143 38 33 chr5 184420236 184420783 -15209367 + L1MA8 LINE L1 5738 6287 -4 235 226 19 0 chr5 184420888 184420941 -15209209 + L2 LINE L2 3258 3311 -2 2429 35 0 3 chr5 184421084 184421402 -15208748 - AluY SINE Alu 0 317 1 317 235 29 0 chr5 184422203 184422271 -15207879 + MLT1D LTR MaLR 1 70 -435 2260 177 60 49 chr5 184422271 184422758 -15207392 + MER21B LTR ERV1 1 492 -371 1187 285 127 20 chr5 184422926 184423540 -15206610 + L2 LINE L2 2443 3122 -191 259 319 11 0 chr5 184423548 184423642 -15206508 + (TA)n Simple_repeat Simple_repeat 1 95 0 383 289 35 42 chr5 184423662 184423804 -15206346 + L2 LINE L2 3164 3304 -9 681 273 34 27 chr5 184423823 184424116 -15206034 + L1MB7 LINE L1 5751 6045 -139 637 186 36 7 chr5 184424669 184424809 -15205341 + L1MA8 LINE L1 6137 6280 -11 266 270 77 136 chr5 184424902 184425410 -15204740 - L2 LINE L2 -3 3310 2833 382 328 92 0 chr5 184425870 184426108 -15204042 + L1ME LINE L1 5502 5761 -360 437 298 210 10 chr5 184426198 184426403 -15203747 - MIR SINE MIR -3 259 14 296 278 14 0 chr5 184426569 184426641 -15203509 - L2 LINE L2 -1 3271 3199 320 191 48 36 chr5 184426693 184426777 -15203373 + L1ME4a LINE L1 5967 6051 -70 344 303 101 0 chr5 184426944 184427063 -15203087 - L2 LINE L2 -619 2695 2565 323 297 92 57 chr5 184427255 184427484 -15202666 + MIR SINE MIR 14 250 -12 431 255 28 0 chr5 184427788 184427894 -15202256 - MER81 DNA DNA -1 113 5 228 284 137 32 chr5 184427916 184428011 -15202139 + MIR SINE MIR 37 141 -67 31 0 0 0 chr5 184429189 184429220 -15200930 + AT_rich Low_complexity Low_complexity 1 31 0 2260 96 3 0 chr5 184429961 184430289 -15199861 + AluSp SINE Alu 1 313 0 462 36 0 0 chr5 184430535 184430591 -15199559 + (TA)n Simple_repeat Simple_repeat 2 57 0 743 195 24 0 chr5 184430635 184430758 -15199392 + FLAM_C SINE Alu 2 127 -16 28 0 0 0 chr5 184430758 184430786 -15199364 + AT_rich Low_complexity Low_complexity 1 28 0 290 225 42 0 chr5 184430998 184431069 -15199081 + MIR3 SINE MIR 94 167 -41 236 89 0 44 chr5 184431573 184431618 -15198532 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 1258 213 48 90 chr5 184431639 184432141 -15198009 + L1MC4 LINE L1 7557 8037 -5 2081 115 7 10 chr5 184432167 184432462 -15197688 + AluSx SINE Alu 1 294 -18 2258 106 0 10 chr5 184433403 184433704 -15196446 + AluSq SINE Alu 1 298 -15 264 100 0 0 chr5 184433935 184433975 -15196175 + (CA)n Simple_repeat Simple_repeat 2 41 0 180 194 0 0 chr5 184434474 184434510 -15195640 - MIR SINE MIR -58 204 169 492 329 114 15 chr5 184435914 184436257 -15193893 + L1ME4a LINE L1 5478 5854 -267 243 0 0 0 chr5 184436288 184436315 -15193835 + (TG)n Simple_repeat Simple_repeat 2 28 0 424 285 92 56 chr5 184438150 184438398 -15191752 - MIR SINE MIR -9 253 3 2663 42 0 3 chr5 184438425 184438737 -15191413 + AluY SINE Alu 1 311 0 560 320 112 32 chr5 184439086 184439398 -15190752 + L2 LINE L2 2977 3313 0 247 24 24 24 chr5 184440136 184440177 -15189973 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2041 135 26 0 chr5 184440185 184440488 -15189662 + AluSx SINE Alu 1 311 -1 184 233 17 17 chr5 184440649 184440709 -15189441 - MER5C DNA MER1_type -200 124 65 227 288 164 0 chr5 184440963 184441036 -15189114 + L2 LINE L2 3229 3313 0 342 0 0 0 chr5 184443119 184443157 -15186993 + (CA)n Simple_repeat Simple_repeat 1 38 0 245 226 62 89 chr5 184443599 184443745 -15186405 - MIR SINE MIR -25 237 96 481 269 56 116 chr5 184443849 184444169 -15185981 + L2 LINE L2 2968 3268 -4 955 307 107 48 chr5 184444776 184444825 -15185325 - L3 LINE CR1 -1 1576 1531 216 0 0 0 chr5 184444825 184444849 -15185301 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 1623 191 22 7 chr5 184444849 184445127 -15185023 - AluJo SINE Alu -30 282 1 955 307 107 48 chr5 184445127 184446000 -15184150 - L3 LINE CR1 -45 1532 598 204 178 41 0 chr5 184446312 184446385 -15183765 + (TA)n Simple_repeat Simple_repeat 2 77 0 1493 181 71 15 chr5 184446822 184447185 -15182965 - MLT1D LTR MaLR 0 505 74 1450 182 31 37 chr5 184447255 184447579 -15182571 - MER21B LTR ERV1 0 863 542 2614 35 0 13 chr5 184449669 184449983 -15180167 + AluY SINE Alu 2 311 0 187 339 0 0 chr5 184451820 184451882 -15178268 + MIR SINE MIR 92 153 -109 198 0 0 0 chr5 184452093 184452115 -15178035 + (T)n Simple_repeat Simple_repeat 1 22 0 457 249 225 6 chr5 184452603 184452772 -15177378 + MIR SINE MIR 31 236 -26 219 69 0 0 chr5 184452789 184452818 -15177332 + (TTA)n Simple_repeat Simple_repeat 3 31 0 279 228 25 13 chr5 184453162 184453241 -15176909 + CT-rich Low_complexity Low_complexity 5 84 0 460 299 8 0 chr5 184453663 184453797 -15176353 + MER5B DNA MER1_type 34 168 -10 788 220 5 75 chr5 184453844 184454044 -15176106 - MER5A DNA MER1_type 0 189 4 250 172 16 31 chr5 184454412 184454476 -15175674 + (TCTA)n Simple_repeat Simple_repeat 1 63 0 192 304 82 99 chr5 184455850 184456093 -15174057 + L2 LINE L2 2836 3074 -198 222 303 67 25 chr5 184456218 184456337 -15173813 + L2 LINE L2 3190 3313 0 684 236 39 17 chr5 184456470 184456645 -15173505 + MER5A DNA MER1_type 1 178 0 307 335 150 31 chr5 184456675 184456902 -15173248 + MIR SINE MIR 3 256 -6 325 94 16 31 chr5 184456974 184457038 -15173112 + (GGA)n Simple_repeat Simple_repeat 3 65 0 397 227 21 106 chr5 184457460 184457601 -15172549 - Charlie8 DNA MER1_type -2288 129 1 21 0 0 0 chr5 184458538 184458559 -15171591 + AT_rich Low_complexity Low_complexity 1 21 0 183 80 0 0 chr5 184459312 184459337 -15170813 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 386 270 249 5 chr5 184459356 184459541 -15170609 + MIR SINE MIR 2 231 -31 186 339 53 47 chr5 184460589 184460760 -15169390 + L2 LINE L2 2821 2992 -280 * 441 326 0 0 chr5 184460756 184460897 -15169253 - MIR SINE MIR -35 227 87 * 464 294 111 57 chr5 184460884 184461252 -15168898 + L2 LINE L2 2922 3309 -4 435 288 171 15 chr5 184462261 184462466 -15167684 - MIR SINE MIR -1 261 25 299 283 142 9 chr5 184463167 184463280 -15166870 - L2 LINE L2 -24 3248 3121 911 231 16 0 chr5 184463408 184463594 -15166556 - MER5A DNA MER1_type 0 189 1 310 88 0 35 chr5 184463778 184463835 -15166315 + (TTC)n Simple_repeat Simple_repeat 2 56 0 180 0 0 0 chr5 184464464 184464484 -15165666 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7063 57 3 40 chr5 184466472 184467746 -15162404 - SVA Other Other -723 1386 393 307 289 55 77 chr5 184467788 184468061 -15162089 + L1M2 LINE L1 596 862 -5987 388 350 35 14 chr5 184468595 184468738 -15161412 - MIR3 SINE MIR -12 196 51 273 321 98 29 chr5 184469053 184469327 -15160823 + L3 LINE CR1 1000 1292 -285 206 284 15 0 chr5 184469510 184469577 -15160573 - L2 LINE L2 -1 3312 3245 275 274 26 35 chr5 184469578 184469691 -15160459 + L2 LINE L2 3202 3313 0 425 378 25 15 chr5 184469700 184469901 -15160249 + L3 LINE CR1 1374 1576 -1 210 171 0 0 chr5 184470635 184470676 -15159474 + CT-rich Low_complexity Low_complexity 4 44 0 249 33 0 0 chr5 184471347 184471377 -15158773 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 327 209 30 0 chr5 184471574 184471641 -15158509 - L2 LINE L2 -2 3311 3243 448 304 108 16 chr5 184471641 184471957 -15158193 - L2 LINE L2 -222 3091 2746 287 49 24 0 chr5 184472073 184472114 -15158036 + (TCCA)n Simple_repeat Simple_repeat 3 44 0 201 265 108 84 chr5 184472128 184472211 -15157939 - L2 LINE L2 -37 3235 3151 313 220 0 59 chr5 184473435 184473522 -15156628 - MIR SINE MIR -45 163 84 188 310 17 0 chr5 184474532 184474590 -15155560 + L2 LINE L2 3245 3303 -10 837 164 0 0 chr5 184474890 184475024 -15155126 + AluSg/x SINE Alu 171 304 -8 288 250 8 86 chr5 184475292 184475420 -15154730 + MIR SINE MIR 95 212 -50 228 67 0 0 chr5 184475487 184475517 -15154633 + (CAT)n Simple_repeat Simple_repeat 1 30 0 353 309 30 40 chr5 184475604 184475805 -15154345 - Charlie8 DNA MER1_type -2180 237 39 396 329 29 18 chr5 184476085 184476255 -15153895 - MIR3 SINE MIR -3 205 34 219 98 78 0 chr5 184477165 184477216 -15152934 + T-rich Low_complexity Low_complexity 2 56 0 431 319 7 29 chr5 184477886 184478024 -15152126 - L2 LINE L2 0 3272 3138 1482 246 77 25 chr5 184478110 184478554 -15151596 + MLT1C LTR MaLR 1 467 0 1215 233 104 44 chr5 184479553 184480034 -15150116 - HAL1 LINE L1 0 2507 1998 490 246 62 8 chr5 184480034 184480164 -15149986 + MIR SINE MIR 33 169 -93 503 177 57 50 chr5 184480172 184480313 -15149837 - MER90 LTR ERV1 0 614 473 2180 121 3 0 chr5 184480314 184480612 -15149538 + AluSx SINE Alu 1 299 -13 1152 241 30 24 chr5 184480613 184480908 -15149242 - MER90 LTR ERV1 -317 297 1 5063 166 24 17 chr5 184480939 184482057 -15148093 + L1MB3 LINE L1 5045 6175 -8 507 285 47 37 chr5 184482118 184482332 -15147818 - MIR SINE MIR -36 226 11 382 327 30 48 chr5 184483363 184483451 -15146699 - MIR3 SINE MIR -13 195 110 2332 114 27 29 chr5 184483451 184483827 -15146323 + THE1C LTR MaLR 1 375 0 382 327 30 48 chr5 184483827 184483903 -15146247 - MIR3 SINE MIR -98 110 34 274 265 38 61 chr5 184483927 184484059 -15146091 + MER5A DNA MER1_type 18 146 -43 522 312 13 47 chr5 184484196 184484430 -15145720 + MIR SINE MIR 1 226 -36 234 240 0 0 chr5 184484805 184484855 -15145295 - L2 LINE L2 0 3313 3264 1984 136 31 0 chr5 184485964 184486250 -15143900 + AluSx SINE Alu 1 295 -17 261 0 0 0 chr5 184487690 184487719 -15142431 + (CA)n Simple_repeat Simple_repeat 2 30 0 238 44 22 44 chr5 184489661 184489706 -15140444 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 27 0 0 0 chr5 184490390 184490417 -15139733 + AT_rich Low_complexity Low_complexity 1 27 0 839 305 45 75 chr5 184490560 184491192 -15138958 + L2 LINE L2 2538 3165 -148 338 243 93 146 chr5 184491963 184492284 -15137866 - L2 LINE L2 -37 3235 2932 631 225 71 115 chr5 184492635 184492888 -15137262 - MIR SINE MIR -8 254 13 1161 89 4 4 chr5 184493709 184493968 -15136182 + (TTTC)n Simple_repeat Simple_repeat 1 259 0 1436 163 90 4 chr5 184493971 184494248 -15135902 - AluJb SINE Alu -6 306 6 545 230 55 24 chr5 184494875 184495040 -15135110 + MER117 DNA MER1_type 28 197 0 321 344 0 0 chr5 184495607 184495697 -15134453 + L1MC4 LINE L1 6614 6703 -1339 * 341 306 47 0 chr5 184495621 184495706 -15134444 - L1MC4 LINE L1 -1339 6703 6615 534 320 35 15 chr5 184495706 184495906 -15134244 - MIR SINE MIR -58 204 1 410 272 196 16 chr5 184497162 184497346 -15132804 + MIR SINE MIR 21 237 -25 2093 106 10 7 chr5 184497507 184497808 -15132342 - AluSx SINE Alu -10 302 1 36 87 0 0 chr5 184497814 184497906 -15132244 + AT_rich Low_complexity Low_complexity 1 92 0 1109 161 101 0 chr5 184497970 184498169 -15131981 + MER20 DNA MER1_type 1 219 0 194 313 54 48 chr5 184498242 184498389 -15131761 + L3b LINE CR1 1246 1393 -190 857 211 113 0 chr5 184499265 184499450 -15130700 + MER3 DNA MER1_type 4 209 0 2075 127 3 0 chr5 184499748 184500048 -15130102 - AluSx SINE Alu -11 301 1 1652 177 27 0 chr5 184500691 184500985 -15129165 + AluJb SINE Alu 1 302 -10 512 238 14 34 chr5 184501400 184501547 -15128603 - MIR SINE MIR -17 245 102 322 306 102 13 chr5 184501674 184501831 -15128319 + MIR SINE MIR 36 206 -56 224 255 75 66 chr5 184502441 184502547 -15127603 + MIR SINE MIR 19 125 -83 1959 141 10 0 chr5 184502595 184502773 -15127377 - AluSx SINE Alu -4 308 124 279 0 0 0 chr5 184502773 184502804 -15127346 + (TG)n Simple_repeat Simple_repeat 2 32 0 1959 141 10 0 chr5 184502804 184502930 -15127220 - AluSx SINE Alu -188 124 1 649 281 24 19 chr5 184503004 184503230 -15126920 - MIR SINE MIR 0 262 38 10990 122 28 7 chr5 184504670 184505491 -15124659 - Tigger1 DNA MER2_type -743 1675 873 1995 104 0 0 chr5 184505491 184505796 -15124354 - AluY SINE Alu 0 305 1 10990 122 28 7 chr5 184505796 184506611 -15123539 - Tigger1 DNA MER2_type -1545 873 4 1232 122 0 25 chr5 184506741 184506937 -15123213 - AluSc SINE Alu -98 211 21 338 262 41 33 chr5 184506940 184507062 -15123088 + MLT1K LTR MaLR 432 554 -34 306 407 25 0 chr5 184507237 184507355 -15122795 + L2 LINE L2 3152 3272 0 590 249 0 73 chr5 184508947 184509112 -15121038 + MER91B DNA MER1_type 1 153 -37 437 289 0 0 chr5 184509119 184509223 -15120927 + MER91B DNA MER1_type 87 190 0 466 351 30 5 chr5 184509794 184509996 -15120154 + L2 LINE L2 2930 3136 -177 466 286 47 23 chr5 184510185 184510356 -15119794 - MIR SINE MIR -19 243 69 268 231 26 26 chr5 184510378 184510456 -15119694 + MIR SINE MIR 28 105 -157 626 291 146 42 chr5 184510641 184511074 -15119076 - L2 LINE L2 0 3313 2836 267 295 13 0 chr5 184511551 184511629 -15118521 + (TG)n Simple_repeat Simple_repeat 2 80 0 197 33 33 0 chr5 184511750 184511780 -15118370 + (TG)n Simple_repeat Simple_repeat 1 31 0 3082 113 57 26 chr5 184512360 184512889 -15117261 + L1MA4 LINE L1 5752 6296 -4 585 298 44 19 chr5 184513154 184513359 -15116791 - MIR SINE MIR -15 247 38 647 113 0 21 chr5 184513505 184513661 -15116489 - AluSp/q SINE Alu 0 344 191 1514 148 41 11 chr5 184513795 184515238 -15114912 + L1PA8 LINE L1 4545 6172 0 2388 128 22 3 chr5 184515238 184515606 -15114544 + L1PB4 LINE L1 5769 6143 -13 720 159 8 8 chr5 184515613 184515739 -15114411 - MLT2C2 LTR ERVL -336 128 3 525 174 11 0 chr5 184516001 184516093 -15114057 - L1 LINE L1 -3433 2713 2621 277 270 135 0 chr5 184516170 184516259 -15113891 + L2 LINE L2 3155 3255 -17 679 308 20 10 chr5 184516839 184517037 -15113113 + MIR SINE MIR 31 230 -32 432 123 0 0 chr5 184517062 184517135 -15113015 + (CA)n Simple_repeat Simple_repeat 2 74 0 240 335 163 37 chr5 184517207 184517452 -15112698 + L2 LINE L2 2686 2961 -353 347 275 92 0 chr5 184517525 184517634 -15112516 + L2 LINE L2 3136 3254 -18 693 300 35 18 chr5 184518256 184518483 -15111667 + MIR SINE MIR 28 258 -4 211 200 0 0 chr5 184518884 184518919 -15111231 + (CA)n Simple_repeat Simple_repeat 1 35 0 6340 183 57 31 chr5 184519519 184520085 -15110065 + Charlie1a DNA MER1_type 2 552 -2209 2367 70 0 0 chr5 184520085 184520386 -15109764 + AluY SINE Alu 1 301 -10 6340 183 57 31 chr5 184520386 184520839 -15109311 + Charlie1a DNA MER1_type 552 992 -1769 1808 96 30 96 chr5 184520839 184521174 -15108976 - AluSp SINE Alu 0 313 1 6340 183 57 31 chr5 184521174 184521570 -15108580 + Charlie1a DNA MER1_type 992 1455 0 2333 58 0 29 chr5 184522619 184522928 -15107222 + AluY SINE Alu 3 302 -9 414 322 48 88 chr5 184522948 184523175 -15106975 - L2 LINE L2 -26 3246 3029 767 315 32 16 chr5 184523176 184523427 -15106723 - MIR SINE MIR 0 262 8 214 324 21 65 chr5 184523431 184523621 -15106529 - L2 LINE L2 -291 3022 2839 199 273 76 15 chr5 184523644 184523710 -15106440 - MIR3 SINE MIR -136 72 3 836 286 41 38 chr5 184524170 184524295 -15105855 - MLT1K LTR MaLR -34 554 431 1794 119 0 32 chr5 184524295 184524572 -15105578 + AluSc SINE Alu 21 288 -21 1912 143 10 0 chr5 184524578 184524885 -15105265 + AluSx SINE Alu 1 310 -2 836 286 41 38 chr5 184524885 184525091 -15105059 - MLT1K LTR MaLR -161 427 215 2216 96 0 6 chr5 184526370 184526683 -15103467 - AluY SINE Alu 0 311 1 425 311 37 24 chr5 184526786 184526950 -15103200 - MIR SINE MIR -56 206 41 495 296 72 51 chr5 184526977 184527312 -15102838 + Charlie8 DNA MER1_type 125 466 -1951 1727 142 42 26 chr5 184527808 184528118 -15102032 + MER46B DNA MER2_type 45 234 -2 * 3017 219 9 28 chr5 184528118 184528770 -15101380 + MER82 DNA MER2_type 13 652 -1 357 344 47 5 chr5 184528961 184529171 -15100979 + MIR SINE MIR 25 242 -20 468 281 64 56 chr5 184530414 184530663 -15099487 - MIR SINE MIR -7 255 5 23 0 0 0 chr5 184530670 184530693 -15099457 + AT_rich Low_complexity Low_complexity 1 23 0 1490 139 0 101 chr5 184530693 184531009 -15099141 - AluJo SINE Alu -18 294 11 371 227 42 59 chr5 184531170 184531289 -15098861 + L2 LINE L2 3197 3313 0 201 366 69 30 chr5 184532674 184532805 -15097345 + L2 LINE L2 3137 3272 0 243 293 0 40 chr5 184532992 184533067 -15097083 + MIR SINE MIR 117 188 -74 478 242 94 0 chr5 184533207 184533335 -15096815 - MIR SINE MIR -12 250 111 583 189 175 7 chr5 184535970 184536113 -15094037 + MIR SINE MIR 86 252 -10 344 340 82 0 chr5 184538764 184538911 -15091239 + MIR3 SINE MIR 39 197 -11 227 250 0 0 chr5 184539744 184539788 -15090362 - MIR SINE MIR -132 76 33 294 289 53 27 chr5 184540347 184540501 -15089649 + MIR SINE MIR 36 148 -60 225 0 0 0 chr5 184541519 184541544 -15088606 + (TG)n Simple_repeat Simple_repeat 2 26 0 200 289 0 0 chr5 184542278 184542323 -15087827 + L2 LINE L2 3251 3295 -18 218 227 23 0 chr5 184542407 184542451 -15087699 + L2 LINE L2 3251 3295 -18 752 308 51 0 chr5 184542790 184543024 -15087126 + MIR SINE MIR 1 246 -16 467 312 127 35 chr5 184543926 184543988 -15086162 + L2 LINE L2 2829 2884 -429 2407 77 3 3 chr5 184543988 184544286 -15085864 - AluSx SINE Alu -14 298 1 467 312 127 35 chr5 184544286 184544617 -15085533 + L2 LINE L2 2884 3258 -55 198 280 98 61 chr5 184545359 184545491 -15084659 - MIR SINE MIR -44 218 82 378 0 0 0 chr5 184546014 184546056 -15084094 + (CA)n Simple_repeat Simple_repeat 2 43 0 564 204 99 80 chr5 184546081 184546282 -15083868 + MER102b DNA MER1_type 135 339 -2 422 262 198 0 chr5 184547140 184547312 -15082838 - MIR SINE MIR -46 216 11 388 338 20 30 chr5 184548004 184548202 -15081948 - MIR SINE MIR -59 203 8 717 237 143 31 chr5 184550767 184550991 -15079159 + MIR SINE MIR 14 262 0 306 281 256 52 chr5 184551712 184552118 -15078032 + L3 LINE CR1 1079 1567 -10 267 31 0 0 chr5 184553823 184553855 -15076295 + (CA)n Simple_repeat Simple_repeat 2 33 0 182 294 43 54 chr5 184553930 184554022 -15076128 + MIR SINE MIR 50 140 -68 183 162 0 0 chr5 184554082 184554119 -15076031 + (CA)n Simple_repeat Simple_repeat 1 37 0 441 271 116 101 chr5 184556351 184556739 -15073411 + L2 LINE L2 2920 3313 0 384 303 73 0 chr5 184556822 184556931 -15073219 + L2 LINE L2 3197 3313 0 440 250 20 10 chr5 184557417 184557517 -15072633 + MIR SINE MIR 3 103 -159 409 261 0 36 chr5 184557545 184557656 -15072494 - L2 LINE L2 -12 3301 3195 382 267 118 30 chr5 184557655 184557790 -15072360 + MIR SINE MIR 116 262 0 * 182 363 44 0 chr5 184557838 184557929 -15072221 - MIR SINE MIR -109 153 59 844 98 0 0 chr5 184560453 184560565 -15069585 + HY1 scRNA scRNA 1 112 0 1932 139 3 57 chr5 184560565 184560953 -15069197 - L1MA8 LINE L1 -20 6271 5905 250 283 72 58 chr5 184560959 184561097 -15069053 - MIR3 SINE MIR -53 155 16 334 261 23 0 chr5 184561290 184561378 -15068772 - MER5A DNA MER1_type -74 115 26 248 220 0 0 chr5 184561496 184561546 -15068604 - MER102b DNA MER1_type -1 329 280 2249 139 23 0 chr5 184561739 184562091 -15068059 + MER46B DNA MER2_type 1 235 -1 638 247 283 8 chr5 184563598 184564054 -15066096 + L2 LINE L2 2739 3313 0 503 288 58 0 chr5 184566659 184566798 -15063352 - MIR SINE MIR -58 204 58 1999 158 3 19 chr5 184567149 184567466 -15062684 - AluJo SINE Alu 0 312 1 760 286 33 37 chr5 184567708 184567953 -15062197 - MIR SINE MIR -17 245 2 180 0 0 0 chr5 184568626 184568646 -15061504 + (TGG)n Simple_repeat Simple_repeat 1 20 0 849 259 53 29 chr5 184568663 184568906 -15061244 - MIR SINE MIR -12 250 2 2252 98 3 7 chr5 184569242 184569551 -15060599 + AluSq SINE Alu 1 308 0 433 295 98 26 chr5 184569883 184570076 -15060074 - MIR SINE MIR -46 216 10 560 319 86 17 chr5 184571718 184571950 -15058200 - MIR SINE MIR -2 260 13 303 318 0 24 chr5 184572355 184572440 -15057710 - L3 LINE CR1 -452 1125 1043 205 222 0 71 chr5 184572831 184572930 -15057220 + GA-rich Low_complexity Low_complexity 5 96 0 2359 102 3 10 chr5 184572966 184573280 -15056870 + AluSq SINE Alu 1 312 -1 761 245 116 0 chr5 184573739 184573973 -15056177 + L2 LINE L2 2751 3008 -305 273 119 0 0 chr5 184574250 184574292 -15055858 + (GGA)n Simple_repeat Simple_repeat 1 42 0 576 329 31 18 chr5 184574763 184574985 -15055165 - MIR SINE MIR -7 255 31 510 266 87 29 chr5 184574985 184575192 -15054958 - MER58A DNA MER1_type -2 222 4 592 303 111 21 chr5 184577275 184577509 -15052641 + MIR SINE MIR 8 262 0 320 281 25 58 chr5 184577515 184577636 -15052514 + MIR3 SINE MIR 62 178 -30 377 355 8 0 chr5 184578568 184578689 -15051461 + L2 LINE L2 3190 3311 -2 191 253 121 24 chr5 184580093 184580176 -15049974 - MIR SINE MIR -78 130 40 * 731 242 31 26 chr5 184580174 184580368 -15049782 - MIR SINE MIR 0 262 68 4943 153 33 2 chr5 184580600 184581443 -15048707 + L1MA6 LINE L1 5432 6300 0 2240 124 10 0 chr5 184582194 184582500 -15047650 - AluSq SINE Alu -4 309 1 725 250 118 19 chr5 184582711 184582923 -15047227 - MIR SINE MIR -1 261 29 779 268 57 9 chr5 184586336 184586564 -15043586 + MIR SINE MIR 22 260 -2 541 261 221 5 chr5 184587695 184587894 -15042256 - MIR SINE MIR -1 261 20 985 162 27 5 chr5 184587986 184588171 -15041979 - MER5A DNA MER1_type 0 189 1 182 284 102 23 chr5 184589629 184589717 -15040433 - MIR SINE MIR -48 214 120 331 330 10 0 chr5 184589747 184589850 -15040300 - MIR SINE MIR -111 151 48 1883 98 47 7 chr5 184589971 184590248 -15039902 - AluSq SINE Alu -20 293 6 425 287 35 21 chr5 184590959 184591102 -15039048 + MIR SINE MIR 51 195 -67 282 224 53 26 chr5 184591425 184591501 -15038649 - L2 LINE L2 -17 3296 3219 628 261 85 0 chr5 184592474 184592639 -15037511 + MIR SINE MIR 14 192 -70 345 260 7 107 chr5 184592648 184592720 -15037430 - MIR SINE MIR -1 261 210 2044 117 0 7 chr5 184592720 184593020 -15037130 - AluSx SINE Alu -14 298 1 345 260 7 107 chr5 184593020 184593097 -15037053 - MIR SINE MIR -52 210 127 1034 210 56 113 chr5 184593154 184593621 -15036529 - MLT1D LTR MaLR -2 503 64 432 235 176 7 chr5 184594571 184594724 -15035426 - MIR SINE MIR -13 249 71 276 269 86 11 chr5 184596363 184596456 -15033694 + L2 LINE L2 3166 3265 -7 761 248 102 43 chr5 184596546 184596868 -15033282 - MER102b DNA MER1_type 0 341 1 516 315 38 22 chr5 184597694 184597878 -15032272 + MIR3 SINE MIR 16 202 -6 2036 107 20 3 chr5 184598386 184598684 -15031466 + AluSx SINE Alu 1 303 -9 518 294 37 67 chr5 184598799 184598885 -15031265 - MER102b DNA MER1_type -51 290 203 1028 223 10 0 chr5 184598885 184599091 -15031059 - MER3 DNA MER1_type -1 208 1 518 294 37 67 chr5 184599091 184599303 -15030847 - MER102b DNA MER1_type -138 203 1 2183 97 0 7 chr5 184599486 184599785 -15030365 + AluSx SINE Alu 2 298 -14 553 152 94 72 chr5 184599785 184599914 -15030236 - FLAM_C SINE Alu -175 137 3 21 0 0 0 chr5 184601311 184601332 -15028818 + AT_rich Low_complexity Low_complexity 1 21 0 181 295 162 0 chr5 184601721 184601826 -15028324 - MIR SINE MIR -17 245 124 23 0 0 0 chr5 184602112 184602135 -15028015 + AT_rich Low_complexity Low_complexity 1 23 0 408 281 28 56 chr5 184602135 184602313 -15027837 + MIR SINE MIR 17 189 -73 814 265 74 48 chr5 184603295 184603604 -15026546 - MER102b DNA MER1_type -24 317 1 201 288 100 25 chr5 184603785 184603865 -15026285 + MIR SINE MIR 17 102 -106 245 237 0 0 chr5 184603872 184603931 -15026219 - MER96 DNA MER1_type? 0 175 117 263 268 130 51 chr5 184605160 184605298 -15024852 + MIR SINE MIR 63 211 -51 210 91 0 0 chr5 184606415 184606448 -15023702 + (T)n Simple_repeat Simple_repeat 1 33 0 189 250 163 0 chr5 184606587 184606679 -15023471 - MIR SINE MIR -67 141 35 634 215 8 2 chr5 184607518 184607665 -15022485 - MIR SINE MIR -55 153 2 231 114 0 0 chr5 184608039 184608074 -15022076 + (CA)n Simple_repeat Simple_repeat 2 36 0 198 0 0 0 chr5 184608413 184608435 -15021715 + (T)n Simple_repeat Simple_repeat 1 22 0 232 258 16 0 chr5 184611631 184611693 -15018457 + L2 LINE L2 3206 3268 -4 230 182 23 0 chr5 184612538 184612582 -15017568 + GA-rich Low_complexity Low_complexity 3 47 0 2321 67 0 0 chr5 184614558 184614856 -15015294 + AluY SINE Alu 1 298 -13 381 235 9 52 chr5 184615165 184615280 -15014870 - MER81 DNA DNA -3 111 2 199 238 0 0 chr5 184616478 184616520 -15013630 + MIR3 SINE MIR 156 197 -11 220 278 11 44 chr5 184617070 184617160 -15012990 - MIR SINE MIR -9 253 167 261 305 38 30 chr5 184617547 184617678 -15012472 - MIR SINE MIR -125 137 6 364 216 72 10 chr5 184618570 184618667 -15011483 + L2 LINE L2 3150 3252 -20 4048 152 1 5 chr5 184618677 184619324 -15010826 + L1MB5 LINE L1 5431 6075 -99 1871 115 0 7 chr5 184619384 184619654 -15010496 + AluSg SINE Alu 38 305 -5 582 137 21 0 chr5 184619654 184619749 -15010401 + L1MB5 LINE L1 6065 6161 -13 405 0 0 0 chr5 184620287 184620332 -15009818 + (TG)n Simple_repeat Simple_repeat 1 45 0 311 0 0 25 chr5 184620890 184620930 -15009220 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 340 279 18 27 chr5 184620990 184621101 -15009049 + MIR3 SINE MIR 83 192 -16 355 269 67 37 chr5 184623624 184623758 -15006392 - MIR3 SINE MIR -5 203 66 381 179 0 122 chr5 184623989 184624112 -15006038 + MER74B LTR ERVL 56 163 -459 896 226 30 13 chr5 184624212 184624442 -15005708 + MER74A LTR ERVL 262 495 -63 1625 36 5 0 chr5 184624578 184624772 -15005378 - L1PA5 LINE L1 -4 6150 5956 1458 103 5 0 chr5 184625631 184625835 -15004315 + L1PB1 LINE L1 5946 6150 -1 2079 114 0 0 chr5 184626121 184626439 -15003711 - AluSq SINE Alu 0 320 3 1477 115 126 52 chr5 184627403 184627673 -15002477 + AluJb SINE Alu 1 290 -22 538 467 111 12 chr5 184627709 184628131 -15002019 - L1MC4a LINE L1 -1884 5924 5461 2319 76 0 16 chr5 184628363 184628667 -15001483 + AluSq SINE Alu 10 308 -5 1724 235 105 10 chr5 184628692 184629178 -15000972 + L1ME1 LINE L1 5630 6161 -5 269 221 48 19 chr5 184629186 184629290 -15000860 - L1ME4a LINE L1 -74 6047 5941 470 267 80 68 chr5 184630173 184630349 -14999801 + MIR SINE MIR 36 213 -49 261 268 285 33 chr5 184630322 184630525 -14999625 - MIR SINE MIR 0 262 16 358 339 79 11 chr5 184630525 184630702 -14999448 - MER5A DNA MER1_type 0 189 1 331 214 79 0 chr5 184631497 184631586 -14998564 + Charlie8 DNA MER1_type 57 152 -2265 292 230 23 35 chr5 184631718 184631805 -14998345 - MIR SINE MIR 0 262 177 787 183 8 0 chr5 184631808 184631939 -14998211 - FRAM SINE Alu -24 152 21 2037 123 3 3 chr5 184631972 184632282 -14997868 + AluSg SINE Alu 1 310 0 309 282 35 0 chr5 184632307 184632392 -14997758 - MIR SINE MIR -101 161 74 467 307 33 0 chr5 184632510 184632663 -14997487 - Charlie8 DNA MER1_type -2165 252 95 833 310 65 0 chr5 184632754 184632986 -14997164 + MIR SINE MIR 2 248 -14 1128 259 24 14 chr5 184634445 184634883 -14995267 - MLT1D LTR MaLR -1 504 4 643 278 46 6 chr5 184635256 184635429 -14994721 - MIR SINE MIR -76 186 7 1998 165 15 3 chr5 184635728 184636067 -14994083 + L1MC2 LINE L1 5982 6324 -20 2239 103 0 6 chr5 184636125 184636436 -14993714 - AluY SINE Alu -2 309 1 262 308 37 68 chr5 184636647 184636845 -14993305 + MIR SINE MIR 18 203 -59 1626 146 11 0 chr5 184636855 184637115 -14993035 + AluJb SINE Alu 12 274 -38 410 287 155 0 chr5 184637223 184637352 -14992798 - MIR SINE MIR -106 156 8 180 0 0 0 chr5 184637827 184637847 -14992303 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 343 436 25 0 chr5 184637895 184638058 -14992092 - L2 LINE L2 0 3272 3106 180 271 139 49 chr5 184638410 184638532 -14991618 + L2 LINE L2 3139 3271 -1 213 154 0 0 chr5 184638537 184638576 -14991574 + GA-rich Low_complexity Low_complexity 3 41 0 410 278 11 23 chr5 184638647 184638876 -14991274 + GA-rich Low_complexity Low_complexity 1 231 -468 2087 129 0 6 chr5 184638876 184639187 -14990963 + AluSq SINE Alu 1 309 -4 410 278 11 23 chr5 184639187 184639355 -14990795 + GA-rich Low_complexity Low_complexity 231 699 0 345 358 83 31 chr5 184639732 184640181 -14989969 + L2 LINE L2 2565 3045 -227 748 257 136 52 chr5 184640533 184640953 -14989197 - L2 LINE L2 -2 3311 2857 198 279 23 0 chr5 184641555 184641598 -14988552 + L2 LINE L2 3207 3250 -22 2162 118 7 0 chr5 184642234 184642540 -14987610 - AluSq SINE Alu -5 308 1 307 330 0 0 chr5 184643120 184643208 -14986942 - MIR3 SINE MIR -43 165 78 196 298 53 21 chr5 184643292 184643386 -14986764 + L2 LINE L2 2328 2424 -890 * 267 186 127 110 chr5 184643370 184643488 -14986662 + L2 LINE L2 3192 3311 -2 527 365 15 11 chr5 184644077 184644337 -14985813 - MIR SINE MIR 0 262 2 247 208 0 0 chr5 184645078 184645131 -14985019 + MIR SINE MIR 81 133 -75 1041 203 60 63 chr5 184645952 184646252 -14983898 + L1MD2 LINE L1 6061 6359 0 233 266 176 50 chr5 184646386 184646585 -14983565 - MIR SINE MIR -13 249 26 234 0 0 0 chr5 184647926 184647952 -14982198 + (CA)n Simple_repeat Simple_repeat 1 26 0 342 0 0 0 chr5 184648058 184648096 -14982054 + (TA)n Simple_repeat Simple_repeat 2 39 0 510 271 90 29 chr5 184648121 184648398 -14981752 - L1ME4a LINE L1 -216 5905 5612 1890 116 4 4 chr5 184649574 184649850 -14980300 + AluSq SINE Alu 1 276 -37 321 26 0 0 chr5 184649854 184649892 -14980258 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 431 114 11 102 chr5 184650162 184650250 -14979900 - MADE1 DNA Mariner 0 80 1 348 263 94 6 chr5 184700639 184700799 -14929351 + L1MB7 LINE L1 5995 6168 -16 232 306 0 42 chr5 184701543 184701615 -14928535 + L2 LINE L2 3245 3313 0 328 287 31 31 chr5 184701642 184701771 -14928379 - MIR SINE MIR -93 169 41 230 322 21 63 chr5 184701904 184702047 -14928103 + L2 LINE L2 3175 3311 -2 2027 103 7 23 chr5 184703493 184703793 -14926357 - AluSx SINE Alu -17 295 1 283 319 64 25 chr5 184704665 184704822 -14925328 + MER5B DNA MER1_type 2 164 -14 1763 146 30 7 chr5 184705298 184705593 -14924557 - AluJb SINE Alu -10 302 1 1864 184 14 27 chr5 184705729 184706099 -14924051 + MLT1A1 LTR MaLR 1 365 0 741 213 89 20 chr5 184706137 184706339 -14923811 - MER58A DNA MER1_type 0 224 9 2030 120 10 0 chr5 184706640 184706940 -14923210 + AluSx SINE Alu 1 303 -9 180 0 0 0 chr5 184708230 184708250 -14921900 + (A)n Simple_repeat Simple_repeat 1 20 0 226 333 0 26 chr5 184708274 184708388 -14921762 + A-rich Low_complexity Low_complexity 2 112 0 2033 158 80 42 chr5 184708461 184708910 -14921240 - MER31B LTR ERV1 0 466 1 275 277 69 20 chr5 184709009 184709110 -14921040 + MIR SINE MIR 156 261 -1 248 216 32 136 chr5 184709315 184709440 -14920710 + L2 LINE L2 3197 3308 -5 299 295 75 35 chr5 184709868 184710041 -14920109 + MIR SINE MIR 82 261 -1 25 0 0 0 chr5 184710045 184710070 -14920080 + AT_rich Low_complexity Low_complexity 1 25 0 215 349 0 0 chr5 184710282 184710345 -14919805 - MIR SINE MIR -114 148 86 519 266 69 37 chr5 184710392 184710610 -14919540 - MER102a DNA MER1_type -1 329 105 1969 114 10 0 chr5 184712215 184712514 -14917636 + AluSc SINE Alu 1 302 -7 2272 75 0 0 chr5 184712656 184712948 -14917202 + AluSq SINE Alu 9 300 -13 642 188 8 8 chr5 184712948 184713065 -14917085 - AluSq/x SINE Alu -195 118 2 458 200 48 9 chr5 184713195 184713300 -14916850 - MER5A DNA MER1_type -77 112 4 387 233 110 48 chr5 184713308 184713454 -14916696 - MER5A DNA MER1_type 0 189 35 213 265 0 60 chr5 184713506 184713589 -14916561 + MIR SINE MIR 56 133 -75 747 283 60 4 chr5 184714085 184714318 -14915832 - MIR SINE MIR -14 248 3 249 303 37 18 chr5 184714665 184714774 -14915376 - MER117 DNA MER1_type -34 163 53 576 234 62 52 chr5 184714853 184715045 -14915105 + MIR3 SINE MIR 8 201 -7 773 239 113 0 chr5 184715532 184715754 -14914396 - MIR SINE MIR -1 261 15 327 348 7 22 chr5 184715823 184715961 -14914189 + L2 LINE L2 3134 3269 -3 797 247 45 22 chr5 184716058 184716281 -14913869 - MIR SINE MIR -13 249 22 263 315 65 0 chr5 184716688 184716796 -14913354 + MIR3 SINE MIR 86 200 -8 202 282 129 12 chr5 184716977 184717062 -14913088 - L2 LINE L2 0 3272 3178 369 347 78 47 chr5 184717325 184717560 -14912590 - L2 LINE L2 -337 2977 2728 285 29 0 0 chr5 184717560 184717594 -14912556 + (TG)n Simple_repeat Simple_repeat 1 34 0 369 347 78 47 chr5 184717594 184717678 -14912472 - L2 LINE L2 -586 2728 2648 330 26 0 0 chr5 184718194 184718233 -14911917 + (CA)n Simple_repeat Simple_repeat 2 40 0 186 43 0 0 chr5 184718433 184718456 -14911694 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 699 328 32 53 chr5 184718642 184718962 -14911188 + L2 LINE L2 2879 3189 -124 930 183 34 85 chr5 184718962 184719055 -14911095 + MER58A DNA MER1_type 2 98 -2322 1861 150 0 10 chr5 184719055 184719349 -14910801 - AluSx SINE Alu -16 296 6 930 183 34 85 chr5 184719349 184719490 -14910660 + MER58A DNA MER1_type 98 224 0 699 328 32 53 chr5 184719490 184719602 -14910548 + L2 LINE L2 3189 3302 -11 314 200 27 27 chr5 184720899 184720974 -14909176 - MER96 DNA MER1_type? -91 84 10 23 0 0 0 chr5 184722215 184722238 -14907912 + AT_rich Low_complexity Low_complexity 1 23 0 1187 288 85 19 chr5 184722701 184723275 -14906875 + L1ME4a LINE L1 5499 6110 -11 2710 0 0 3 chr5 184723320 184723622 -14906528 - AluYa5 SINE Alu -10 301 1 423 216 147 0 chr5 184724932 184725048 -14905102 + MIR SINE MIR 18 150 -112 2236 93 0 0 chr5 184726043 184726345 -14903805 + AluY SINE Alu 1 302 -9 2179 109 3 0 chr5 184726357 184726669 -14903481 + AluSq SINE Alu 1 313 0 410 281 0 0 chr5 184726917 184727006 -14903144 + MIR SINE MIR 58 146 -116 406 263 76 17 chr5 184727007 184727125 -14903025 - L2 LINE L2 -2 3311 3187 184 405 92 0 chr5 184727137 184727290 -14902860 - L2 LINE L2 0 3313 3147 252 303 115 51 chr5 184727999 184728481 -14901669 - L2 LINE L2 -29 3284 2477 360 0 0 0 chr5 184728481 184728521 -14901629 + (TG)n Simple_repeat Simple_repeat 1 40 0 252 303 115 51 chr5 184728521 184728579 -14901571 - L2 LINE L2 -836 2477 2424 358 300 64 9 chr5 184728625 184728735 -14901415 + MIR SINE MIR 28 143 -119 193 143 0 0 chr5 184729165 184729193 -14900957 + L3b LINE CR1 1535 1562 -21 25 0 0 0 chr5 184729378 184729403 -14900747 + AT_rich Low_complexity Low_complexity 1 25 0 2003 112 7 0 chr5 184729403 184729689 -14900461 - AluSq SINE Alu -25 288 1 816 246 5 23 chr5 184729701 184729916 -14900234 - L1MB8 LINE L1 -1 6177 5967 339 221 63 71 chr5 184730274 184730401 -14899749 - MIR3 SINE MIR -79 129 4 407 298 0 0 chr5 184731588 184731729 -14898421 + (CA)n Simple_repeat Simple_repeat 2 142 0 599 262 21 0 chr5 184732218 184732363 -14897787 - MIR SINE MIR -27 235 88 551 309 5 16 chr5 184736517 184736708 -14893442 - MIR SINE MIR -54 208 20 600 282 66 36 chr5 184736736 184737041 -14893109 + L1ME4a LINE L1 5571 5884 -237 311 211 40 40 chr5 184737036 184737174 -14892976 + L1ME1 LINE L1 5722 5856 -310 * 341 280 43 0 chr5 184738037 184738130 -14892020 + MER5C DNA MER1_type 27 123 -201 628 157 130 16 chr5 184738255 184738321 -14891829 + MER5C DNA MER1_type 118 175 -149 2057 147 166 0 chr5 184738321 184738688 -14891462 + MSTC LTR MaLR 1 428 0 628 157 130 16 chr5 184738688 184738806 -14891344 + MER5C DNA MER1_type 175 323 -1 491 250 128 12 chr5 184739694 184739858 -14890292 + MIR SINE MIR 59 241 -21 849 158 0 0 chr5 184740058 184740197 -14889953 + FRAM SINE Alu 12 150 -26 23 86 0 0 chr5 184740197 184740255 -14889895 + AT_rich Low_complexity Low_complexity 1 58 0 340 241 90 38 chr5 184740948 184741081 -14889069 - MER5A DNA MER1_type -7 182 43 205 307 98 46 chr5 184740949 184741102 -14889048 + MER5A DNA MER1_type 23 183 -6 * 334 257 73 28 chr5 184741862 184741971 -14888179 + MLT1K LTR MaLR 310 423 -165 436 299 54 11 chr5 184742812 184742996 -14887154 + MIR SINE MIR 23 214 -48 1321 86 0 0 chr5 184743042 184743205 -14886945 + AluSg/x SINE Alu 134 296 -16 629 234 122 9 chr5 184743526 184743748 -14886402 + MIR SINE MIR 2 248 -14 398 294 0 0 chr5 184744302 184744394 -14885756 - MER81 DNA DNA -22 92 1 435 305 47 32 chr5 184745872 184746062 -14884088 + MIR3 SINE MIR 5 197 -11 435 351 20 10 chr5 184747030 184747232 -14882918 - MIR SINE MIR 0 262 59 250 312 19 57 chr5 184747300 184747457 -14882693 - MIR SINE MIR -1 261 111 2192 117 16 3 chr5 184748594 184748902 -14881248 - AluSx SINE Alu 0 312 1 639 270 11 6 chr5 184748914 184749092 -14881058 - MIR SINE MIR -56 206 28 189 195 0 0 chr5 184751949 184751990 -14878160 + CT-rich Low_complexity Low_complexity 1 41 0 2313 82 0 0 chr5 184752386 184752705 -14877445 + AluSg SINE Alu 1 319 0 753 160 8 0 chr5 184752731 184752856 -14877294 + MER5A DNA MER1_type 6 131 -58 315 0 0 0 chr5 184752856 184752891 -14877259 + (TG)n Simple_repeat Simple_repeat 2 36 0 1260 223 15 11 chr5 184752891 184753165 -14876985 - AluJb SINE Alu -27 285 11 883 224 0 16 chr5 184753800 184753992 -14876158 + MER5A DNA MER1_type 1 189 0 187 328 134 15 chr5 184755246 184755380 -14874770 - MIR3 SINE MIR -55 153 4 312 27 0 0 chr5 184755727 184755764 -14874386 + (TAA)n Simple_repeat Simple_repeat 2 38 0 2113 110 3 32 chr5 184756131 184756440 -14873710 + AluSx SINE Alu 1 300 -12 214 299 125 7 chr5 184756826 184756970 -14873180 - MIR SINE MIR -70 192 32 2010 124 3 3 chr5 184758089 184758407 -14871743 - AluSx SINE Alu 0 318 1 303 285 126 7 chr5 184758887 184759038 -14871112 - L1ME4a LINE L1 -15 6106 5938 566 130 14 14 chr5 184759080 184759218 -14870932 + (TA)n Simple_repeat Simple_repeat 2 139 0 360 0 0 0 chr5 184759218 184759258 -14870892 + (GA)n Simple_repeat Simple_repeat 2 41 0 572 245 72 95 chr5 184760516 184760822 -14869328 + Charlie8 DNA MER1_type 37 335 -2082 254 300 0 0 chr5 184761591 184761671 -14868479 + (CATA)n Simple_repeat Simple_repeat 1 80 0 2490 67 0 10 chr5 184761713 184762026 -14868124 + AluY SINE Alu 2 311 0 2123 163 24 75 chr5 184763218 184763672 -14866478 + Tigger2a DNA MER2_type 4 434 0 250 336 41 20 chr5 184763699 184763845 -14866305 - MIR SINE MIR -113 149 1 1807 102 106 0 chr5 184765351 184765644 -14864506 + AluSq SINE Alu 1 320 0 408 222 117 53 chr5 184765955 184766146 -14864004 - L1ME4a LINE L1 -379 5742 5546 253 294 0 12 chr5 184766425 184766510 -14863640 + MIR SINE MIR 33 116 -92 23 54 0 0 chr5 184766828 184766865 -14863285 + AT_rich Low_complexity Low_complexity 1 37 0 616 231 76 24 chr5 184766935 184767181 -14862969 + L1MC5 LINE L1 7000 7249 -733 887 176 35 44 chr5 184767416 184767643 -14862507 - MER33 DNA MER1_type -95 229 5 333 319 71 25 chr5 184767658 184767831 -14862319 + L1MC5 LINE L1 7518 7706 -255 555 69 0 0 chr5 184767831 184767903 -14862247 - L1PA6 LINE L1 0 6154 6083 333 319 71 25 chr5 184767903 184767967 -14862183 + L1MC5 LINE L1 7706 7766 -195 485 244 76 116 chr5 184770763 184770879 -14859271 + L1MC4a LINE L1 5575 5694 -2114 2196 68 0 0 chr5 184770879 184771145 -14859005 + AluY SINE Alu 36 301 -10 485 244 76 116 chr5 184771145 184771372 -14858778 + L1MC4a LINE L1 5694 5904 -1904 25 75 0 0 chr5 184771500 184771553 -14858597 + AT_rich Low_complexity Low_complexity 1 53 0 264 253 21 21 chr5 184773707 184773802 -14856348 - MIR SINE MIR -8 254 160 394 281 113 5 chr5 184773813 184773998 -14856152 - MIR SINE MIR -6 256 52 2567 72 0 0 chr5 184774041 184774345 -14855805 + AluY SINE Alu 1 304 -7 371 306 124 50 chr5 184775121 184775382 -14854768 + L2 LINE L2 2439 2679 -635 2185 120 0 3 chr5 184775382 184775681 -14854469 - AluSg SINE Alu -12 298 1 371 306 124 50 chr5 184775681 184775720 -14854430 + L2 LINE L2 2679 2714 -600 1145 180 62 0 chr5 184775720 184775931 -14854219 + MER58A DNA MER1_type 1 224 0 371 306 124 50 chr5 184775931 184776048 -14854102 + L2 LINE L2 2714 2888 -426 306 87 0 0 chr5 184776349 184776395 -14853755 + (TG)n Simple_repeat Simple_repeat 2 47 0 1664 188 0 11 chr5 184776407 184776678 -14853472 - AluJo SINE Alu -44 268 1 265 163 0 0 chr5 184776862 184776911 -14853239 - L2 LINE L2 -10 3303 3255 4717 161 27 36 chr5 184778513 184779406 -14850744 + L1MB2 LINE L1 5286 6170 -1 203 245 151 0 chr5 184779957 184780010 -14850140 + L2 LINE L2 3205 3265 -7 503 259 133 12 chr5 184780885 184781051 -14849099 - MIR SINE MIR -1 261 76 687 270 33 5 chr5 184781572 184781787 -14848363 + MIR SINE MIR 29 249 -13 301 312 22 14 chr5 184782528 184782666 -14847484 - L2 LINE L2 0 3272 3134 472 15 0 30 chr5 184783505 184783572 -14846578 + (CA)n Simple_repeat Simple_repeat 2 66 0 351 271 108 7 chr5 184783765 184783933 -14846217 + MIR SINE MIR 3 187 -63 205 294 0 29 chr5 184783979 184784047 -14846103 + MER91B DNA MER1_type 72 137 -3 2090 127 3 3 chr5 184784419 184784719 -14845431 + AluSc SINE Alu 1 300 -9 334 321 46 15 chr5 184784728 184784859 -14845291 - MIR SINE MIR -97 165 31 212 350 156 19 chr5 184785651 184785908 -14844242 - L2 LINE L2 -90 3182 2891 423 226 42 156 chr5 184785925 184786005 -14844145 - MIR SINE MIR -19 243 156 2402 80 0 32 chr5 184786005 184786319 -14843831 + AluSg SINE Alu 1 304 -6 423 226 42 156 chr5 184786319 184786450 -14843700 - MIR SINE MIR -106 156 56 199 33 0 0 chr5 184786512 184786542 -14843608 + L2 LINE L2 3028 3057 -215 2255 96 3 0 chr5 184787397 184787688 -14842462 - AluSg SINE Alu -16 294 3 477 313 121 46 chr5 184787946 184788684 -14841466 - L2 LINE L2 0 3313 2515 382 318 43 7 chr5 184788814 184789026 -14841124 + MIR SINE MIR 35 261 -1 273 252 45 63 chr5 184789125 184789236 -14840914 + MER91B DNA MER1_type 22 130 -60 245 311 0 0 chr5 184789249 184789323 -14840827 + MER91B DNA MER1_type 87 160 -30 2267 101 0 0 chr5 184789798 184790086 -14840064 - AluSg SINE Alu -22 288 1 494 301 115 10 chr5 184790987 184791196 -14838954 - MIR SINE MIR -15 247 17 441 259 122 24 chr5 184792449 184792654 -14837496 + MIR SINE MIR 20 244 -18 299 244 35 17 chr5 184792918 184793033 -14837117 + MIR SINE MIR 91 207 -55 841 243 72 18 chr5 184793208 184793571 -14836579 + MLT1K LTR MaLR 134 583 -5 417 274 83 6 chr5 184794632 184794803 -14835347 + MIR SINE MIR 31 212 -50 2237 111 14 0 chr5 184796404 184796693 -14833457 - AluSg SINE Alu -17 293 1 1168 182 37 8 chr5 184799102 184799344 -14830806 - AluJb SINE Alu -53 259 11 247 289 56 56 chr5 184799388 184799568 -14830582 + MIR SINE MIR 12 191 -71 2266 97 23 7 chr5 184800259 184800558 -14829592 + AluSc SINE Alu 1 304 -5 2084 127 3 32 chr5 184802177 184802493 -14827657 + AluSx SINE Alu 6 312 0 184 288 0 62 chr5 184804668 184804748 -14825402 + MIR SINE MIR 21 95 -167 1504 234 27 3 chr5 184804765 184805099 -14825051 + MLT1A2 LTR MaLR 1 342 -32 554 164 145 20 chr5 184805104 184805256 -14824894 + Tigger1 DNA MER2_type 21 191 -2227 * 1140 168 24 5 chr5 184805225 184805433 -14824717 + Tigger1 DNA MER2_type 2206 2417 -1 214 350 86 0 chr5 184805470 184805587 -14824563 + MIR SINE MIR 111 237 -25 287 266 128 21 chr5 184805821 184805915 -14824235 - L2 LINE L2 0 3272 3169 299 180 40 60 chr5 184806147 184806247 -14823903 - L2 LINE L2 -39 3233 3136 311 65 22 0 chr5 184806700 184806746 -14823404 + (TC)n Simple_repeat Simple_repeat 2 48 0 234 0 0 0 chr5 184806746 184806772 -14823378 + (CA)n Simple_repeat Simple_repeat 1 26 0 2092 138 62 6 chr5 184807098 184807453 -14822697 + THE1C LTR MaLR 1 375 0 468 155 0 0 chr5 184808823 184808894 -14821256 - FLAM SINE Alu -25 118 48 665 266 49 40 chr5 184808962 184809188 -14820962 - MIR SINE MIR 0 262 35 21 0 0 0 chr5 184810012 184810033 -14820117 + AT_rich Low_complexity Low_complexity 1 21 0 342 49 0 0 chr5 184810599 184810640 -14819510 - MER53 DNA DNA -148 41 1 2142 108 3 26 chr5 184810760 184811066 -14819084 + AluSx SINE Alu 1 299 -13 540 333 40 0 chr5 184812938 184813187 -14816963 + MIR SINE MIR 2 260 -2 282 29 0 0 chr5 184814233 184814268 -14815882 + (CAGG)n Simple_repeat Simple_repeat 2 36 0 2240 128 0 0 chr5 184814814 184815110 -14815040 + AluSx SINE Alu 6 301 -11 294 347 41 0 chr5 184815654 184815775 -14814375 + MIR3 SINE MIR 79 204 -4 1340 162 112 72 chr5 184815789 184816067 -14814083 + AluJo SINE Alu 1 289 -23 495 0 0 0 chr5 184816072 184816127 -14814023 + (CA)n Simple_repeat Simple_repeat 2 56 0 280 176 95 27 chr5 184816726 184816800 -14813350 - MIR SINE MIR -13 249 171 457 293 7 0 chr5 184816856 184817006 -14813144 + MIR SINE MIR 109 259 -3 353 289 13 39 chr5 184818242 184818398 -14811752 + MER5A DNA MER1_type 35 186 -3 192 337 139 10 chr5 184819787 184819888 -14810262 - MER5A DNA MER1_type -26 163 50 928 201 41 46 chr5 184820111 184820330 -14809820 + MER58A DNA MER1_type 1 218 -6 662 279 89 61 chr5 184820351 184820778 -14809372 + MLT1J1 LTR MaLR 8 446 0 212 261 98 22 chr5 184821169 184821261 -14808889 + MIR SINE MIR 45 143 -65 2290 96 0 7 chr5 184821488 184821791 -14808359 - AluSx SINE Alu -11 301 1 586 213 238 0 chr5 184821967 184822131 -14808019 - MER3 DNA MER1_type 0 209 7 206 270 95 40 chr5 184824147 184824295 -14805855 - MIR SINE MIR -60 202 47 571 282 83 32 chr5 184826579 184826856 -14803294 + L1ME4a LINE L1 5725 6015 -106 24 0 0 0 chr5 184826861 184826885 -14803265 + AT_rich Low_complexity Low_complexity 1 24 0 207 324 14 0 chr5 184827254 184827328 -14802822 + MIR SINE MIR 83 157 -105 612 239 100 0 chr5 184828525 184828705 -14801445 + MIR SINE MIR 55 252 -10 189 377 16 8 chr5 184828861 184828983 -14801167 - MIR3 SINE MIR -50 158 36 860 172 28 11 chr5 184829480 184829660 -14800490 + MER5A DNA MER1_type 6 188 -1 290 269 25 42 chr5 184830511 184830630 -14799520 - MIR SINE MIR -59 149 33 362 298 162 32 chr5 184831404 184832007 -14798143 - L2 LINE L2 -1 3312 2619 3742 204 28 46 chr5 184832950 184833952 -14796198 - L1MA9 LINE L1 -38 6274 5301 2548 66 0 3 chr5 184833952 184834253 -14795897 - AluSc SINE Alu -9 300 1 3742 204 28 46 chr5 184834253 184834706 -14795444 - L1MA9 LINE L1 -1011 5301 4841 421 273 12 75 chr5 184834771 184834888 -14795262 + MER5B DNA MER1_type 27 133 -45 1849 138 35 14 chr5 184834888 184835054 -14795096 - AluJb SINE Alu -15 297 121 414 0 0 0 chr5 184835054 184835100 -14795050 + (TG)n Simple_repeat Simple_repeat 2 47 0 1849 138 35 14 chr5 184835100 184835223 -14794927 - AluJb SINE Alu -191 121 2 421 273 12 75 chr5 184835223 184835266 -14794884 + MER5B DNA MER1_type 133 177 -1 602 223 20 66 chr5 184835449 184835509 -14794641 - MIR SINE MIR -17 245 184 2310 92 7 0 chr5 184835509 184835812 -14794338 + AluY SINE Alu 1 305 -6 602 223 20 66 chr5 184835812 184835948 -14794202 - MIR SINE MIR -78 184 58 443 182 148 17 chr5 184838160 184838392 -14791758 - MER5C DNA MER1_type -4 320 2 322 282 16 16 chr5 184838781 184838905 -14791245 - MIR SINE MIR -118 144 21 601 94 0 0 chr5 184839191 184839276 -14790874 - L1PA5 LINE L1 -1 6153 6069 2415 90 0 3 chr5 184839447 184839758 -14790392 - AluY SINE Alu -1 310 1 264 247 52 31 chr5 184839918 184840015 -14790135 + MLT1L LTR MaLR 517 615 0 563 228 124 0 chr5 184841374 184841519 -14788631 - L2 LINE L2 -2 3270 3108 461 251 147 37 chr5 184843184 184843375 -14786775 - MIR SINE MIR -14 248 37 2744 159 113 4 chr5 184844229 184844726 -14785424 + L1MB7 LINE L1 5444 5994 -190 1095 199 7 59 chr5 184844846 184845132 -14785018 - AluJo SINE Alu -27 285 15 230 317 50 122 chr5 184845285 184845604 -14784546 + L2 LINE L2 2345 2640 -674 194 319 138 26 chr5 184845990 184846106 -14784044 + L2 LINE L2 3143 3271 -1 371 333 76 34 chr5 184846269 184846506 -14783644 + MIR SINE MIR 16 262 0 403 371 0 0 chr5 184848617 184848741 -14781409 - L2 LINE L2 0 3272 3149 312 282 154 17 chr5 184848771 184848888 -14781262 - L3 LINE CR1 -544 1033 901 233 122 122 0 chr5 184848968 184849009 -14781141 + L2 LINE L2 3264 3309 -4 217 296 92 56 chr5 184849035 184849177 -14780973 - L3 LINE CR1 -784 793 647 234 207 0 0 chr5 184849931 184849989 -14780161 + GA-rich Low_complexity Low_complexity 1 58 0 1504 208 55 64 chr5 184851844 184851934 -14778216 + MLT1C LTR MaLR 1 90 -377 2113 107 0 10 chr5 184851934 184852233 -14777917 + AluSx SINE Alu 4 299 -13 1504 208 55 64 chr5 184852233 184852613 -14777537 + MLT1C LTR MaLR 90 467 0 374 364 103 22 chr5 184852861 184853180 -14776970 + L2 LINE L2 2926 3270 -2 874 276 101 47 chr5 184853279 184853685 -14776465 - L2 LINE L2 -7 3306 2827 2185 83 30 0 chr5 184853685 184853985 -14776165 + AluSc SINE Alu 1 309 0 874 276 101 47 chr5 184853985 184854267 -14775883 - L2 LINE L2 -486 2827 2562 397 216 78 20 chr5 184855007 184855109 -14775041 + MIR SINE MIR 59 166 -96 384 266 181 15 chr5 184857480 184857679 -14772471 - MIR SINE MIR -30 232 1 653 251 92 51 chr5 184857691 184857934 -14772216 + MER102b DNA MER1_type 25 284 -1144 1659 170 50 50 chr5 184857934 184858232 -14771918 + MLT1A1 LTR MaLR 2 303 -62 1915 134 0 7 chr5 184858232 184858548 -14771602 + AluSx SINE Alu 1 314 0 1659 170 50 50 chr5 184858548 184858612 -14771538 + MLT1A1 LTR MaLR 302 365 0 653 251 92 51 chr5 184858612 184858663 -14771487 + MER102b DNA MER1_type 284 331 -10 433 338 91 9 chr5 184859044 184859263 -14770887 + MIR SINE MIR 12 248 -14 1855 88 0 0 chr5 184860087 184860338 -14769812 + AluY SINE Alu 60 310 -1 251 270 0 90 chr5 184860775 184860886 -14769264 + L2 LINE L2 3150 3250 -63 551 303 50 46 chr5 184862506 184862747 -14767403 - MIR SINE MIR -19 243 2 294 301 0 11 chr5 184862936 184863029 -14767121 - MIR3 SINE MIR -5 203 112 588 243 113 17 chr5 184864051 184864228 -14765922 - MIR SINE MIR -32 230 37 1077 283 30 22 chr5 184864474 184865045 -14765105 + L1ME4a LINE L1 5299 5876 -245 180 0 0 0 chr5 184865068 184865088 -14765062 + (A)n Simple_repeat Simple_repeat 1 20 0 1982 143 13 0 chr5 184865253 184865561 -14764589 + AluSx SINE Alu 1 312 0 495 261 105 25 chr5 184867208 184867410 -14762740 - MIR SINE MIR -37 171 1 198 0 0 0 chr5 184867877 184867899 -14762251 + (CAGA)n Simple_repeat Simple_repeat 3 24 0 270 106 0 0 chr5 184868923 184868970 -14761180 + (A)n Simple_repeat Simple_repeat 1 47 0 589 231 95 0 chr5 184869074 184869221 -14760929 + MIR SINE MIR 10 170 -92 437 238 44 47 chr5 184870389 184870559 -14759591 + MIR SINE MIR 29 202 -60 2260 161 51 5 chr5 184871643 184872035 -14758115 + MSTB LTR MaLR 1 410 -16 933 286 53 67 chr5 184872060 184872511 -14757639 + LTR67 LTR ERVL 113 557 0 214 205 0 0 chr5 184872522 184872561 -14757589 + (TAA)n Simple_repeat Simple_repeat 2 40 0 516 273 41 6 chr5 184872562 184872734 -14757416 - MIR SINE MIR -1 261 84 187 277 46 62 chr5 184873868 184873933 -14756217 + L2 LINE L2 2796 2859 -455 247 228 0 18 chr5 184873957 184874014 -14756136 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 188 315 19 0 chr5 184874455 184874509 -14755641 + L2 LINE L2 3216 3270 -2 262 204 10 71 chr5 184874549 184874647 -14755503 + CT-rich Low_complexity Low_complexity 3 94 0 288 77 0 0 chr5 184875064 184875103 -14755047 + (CA)n Simple_repeat Simple_repeat 1 39 0 2506 141 25 28 chr5 184875117 184875379 -14754771 + Tigger2a DNA MER2_type 1 263 -2445 2223 90 0 10 chr5 184875379 184875690 -14754460 + AluSg SINE Alu 1 308 -2 2506 141 25 28 chr5 184875690 184875859 -14754291 + Tigger2a DNA MER2_type 263 431 -3 25 0 0 0 chr5 184875994 184876019 -14754131 + AT_rich Low_complexity Low_complexity 1 25 0 248 321 57 50 chr5 184876493 184876652 -14753498 - MIR SINE MIR -55 207 48 302 353 60 0 chr5 184876872 184876988 -14753162 - L2 LINE L2 0 3313 3191 201 39 0 0 chr5 184877204 184877230 -14752920 + (CAGAGA)n Simple_repeat Simple_repeat 3 28 0 21 36 0 0 chr5 184877926 184877954 -14752196 + AT_rich Low_complexity Low_complexity 1 28 0 448 229 28 20 chr5 184878169 184878418 -14751732 + GA-rich Low_complexity Low_complexity 1 250 0 186 275 17 17 chr5 184878463 184878583 -14751567 + GA-rich Low_complexity Low_complexity 4 123 0 1039 178 80 5 chr5 184878588 184878926 -14751224 - MER31A LTR ERV1 -5 480 2 544 266 95 31 chr5 184878938 184879160 -14750990 - MIR SINE MIR 0 262 27 620 284 37 5 chr5 184880423 184880613 -14749537 - MIR SINE MIR -35 227 32 209 253 132 11 chr5 184880654 184880745 -14749405 - MIR SINE MIR -66 196 95 1756 111 18 81 chr5 184882901 184883234 -14746916 - AluSq SINE Alu -1 312 1 333 236 40 108 chr5 184883236 184883384 -14746766 + Charlie8 DNA MER1_type 107 244 -2173 290 206 29 0 chr5 184883466 184883534 -14746616 + MER91A DNA MER1_type 125 194 -2 712 275 50 50 chr5 184885125 184885467 -14744683 + L1ME4a LINE L1 5379 5720 -401 275 217 66 57 chr5 184885608 184885714 -14744436 + MER5C DNA MER1_type 2 108 -216 200 61 61 0 chr5 184885754 184885787 -14744363 + A-rich Low_complexity Low_complexity 4 38 0 565 270 132 31 chr5 184886153 184886509 -14743641 + L1ME4a LINE L1 5728 6119 -2 195 162 0 0 chr5 184887043 184887080 -14743070 + (CAA)n Simple_repeat Simple_repeat 3 39 0 222 236 27 143 chr5 184887287 184887363 -14742787 + MER5A DNA MER1_type 15 75 -114 2144 125 0 0 chr5 184887363 184887675 -14742475 + AluSx SINE Alu 1 312 0 222 236 27 143 chr5 184887675 184887759 -14742391 + MER5A DNA MER1_type 75 167 -22 198 302 116 44 chr5 184888285 184888510 -14741640 + L2 LINE L2 3009 3249 -64 865 243 69 97 chr5 184888567 184889102 -14741048 - LTR33A LTR ERVL -1 522 3 789 211 77 38 chr5 184889172 184889553 -14740597 + MLT1C LTR MaLR 5 432 -35 2102 104 0 3 chr5 184890569 184890857 -14739293 + AluSq SINE Alu 5 291 -22 276 170 0 0 chr5 184891021 184891074 -14739076 + (CTATT)n Simple_repeat Simple_repeat 3 55 0 350 281 45 40 chr5 184891127 184891326 -14738824 + LTR67 LTR ERVL 97 296 -261 654 297 149 19 chr5 184891680 184892003 -14738147 - MLT1K LTR MaLR 0 588 224 812 300 13 1 chr5 184892570 184892806 -14737344 - MIR SINE MIR -5 257 16 555 255 52 20 chr5 184892802 184892955 -14737195 - MIR SINE MIR -64 198 41 * 2051 113 0 3 chr5 184892972 184893264 -14736886 + AluSx SINE Alu 1 291 -21 920 232 11 0 chr5 184893397 184893578 -14736572 + MER58A DNA MER1_type 39 221 -3 386 284 225 0 chr5 184894737 184894973 -14735177 - L1MC4a LINE L1 -1880 5928 5640 958 237 27 5 chr5 184895006 184895225 -14734925 - MER58A DNA MER1_type 0 224 1 548 299 82 0 chr5 184895353 184895537 -14734613 - MIR SINE MIR -63 199 1 262 245 11 11 chr5 184896016 184896110 -14734040 + GA-rich Low_complexity Low_complexity 4 97 0 23 0 0 0 chr5 184896596 184896619 -14733531 + AT_rich Low_complexity Low_complexity 1 23 0 188 247 13 78 chr5 184898002 184898079 -14732071 - L2 LINE L2 0 3272 3201 473 301 144 18 chr5 184898081 184898310 -14731840 - MIR SINE MIR 0 262 5 195 325 120 37 chr5 184898346 184898537 -14731613 - L2 LINE L2 -110 3162 2956 279 323 31 8 chr5 184898928 184899055 -14731095 + MIR SINE MIR 49 178 -84 414 296 159 57 chr5 184900157 184900699 -14729451 + L2 LINE L2 2625 3225 -47 306 207 224 0 chr5 184900816 184900932 -14729218 - Charlie8 DNA MER1_type -2152 265 124 1185 145 40 10 chr5 184900968 184901168 -14728982 + MER2 DNA MER2_type 1 206 -139 448 206 0 0 chr5 184901196 184901269 -14728881 + MER2 DNA MER2_type 267 339 -6 285 214 14 2 chr5 184901301 184901373 -14728777 - MLT2B1 LTR ERVL -46 469 304 597 273 14 0 chr5 184901373 184901516 -14728634 - MLT2B1 LTR ERVL -362 158 14 648 303 5 46 chr5 184901656 184901874 -14728276 - MIR SINE MIR -11 251 43 180 204 0 140 chr5 184902874 184902967 -14727183 - L3 LINE CR1 -896 681 602 2695 69 3 3 chr5 184904275 184904625 -14725525 - L1PA11 LINE L1 -213 5955 5606 1361 125 51 0 chr5 184904625 184904841 -14725309 + L1PA11 LINE L1 5948 6174 0 192 328 0 0 chr5 184904893 184904951 -14725199 - L2 LINE L2 -605 2709 2652 351 298 77 60 chr5 184906335 184906570 -14723580 + L2 LINE L2 2854 3092 -180 222 343 27 0 chr5 184906848 184906921 -14723229 + MIR SINE MIR 1 75 -187 451 304 9 0 chr5 184907397 184907509 -14722641 + L2 LINE L2 3200 3312 -1 673 240 1 28 chr5 184907553 184907734 -14722416 + MLT1E LTR MaLR 1 170 -397 1846 224 67 11 chr5 184907766 184908216 -14721934 + MLT1E LTR MaLR 119 593 0 797 98 0 0 chr5 184908663 184908765 -14721385 - AluSq/x SINE Alu -210 103 2 567 187 136 58 chr5 184908765 184908920 -14721230 + MER58B DNA MER1_type 171 337 -4 1778 154 164 20 chr5 184908934 184909342 -14720808 - MLT1C LTR MaLR 0 467 1 540 296 77 67 chr5 184909342 184909730 -14720420 + L2 LINE L2 2585 2976 -338 361 133 307 0 chr5 184909845 184909920 -14720230 + MLT1C LTR MaLR 370 467 0 571 186 128 73 chr5 184909934 184910088 -14720062 - MER58B DNA MER1_type -2083 337 193 1999 130 7 3 chr5 184910088 184910396 -14719754 + AluSq SINE Alu 1 309 -4 571 186 128 73 chr5 184910396 184910452 -14719698 - MER58B DNA MER1_type -2227 193 12 224 241 19 0 chr5 184910643 184910697 -14719453 + MIR3 SINE MIR 139 193 -15 290 320 31 47 chr5 184910934 184911062 -14719088 + MIR SINE MIR 34 159 -103 248 278 56 11 chr5 184911114 184911204 -14718946 + MIR SINE MIR 29 122 -140 1325 257 62 41 chr5 184911237 184911661 -14718489 + LTR33 LTR ERVL 25 462 -59 2475 179 21 31 chr5 184911661 184912175 -14717975 - L1MB3 LINE L1 -2 6181 5673 1325 257 62 41 chr5 184912175 184912237 -14717913 + LTR33 LTR ERVL 462 521 0 2077 126 0 0 chr5 184912264 184912573 -14717577 - AluSc SINE Alu 0 309 1 227 278 83 0 chr5 184912590 184912662 -14717488 + MIR SINE MIR 185 262 0 471 241 207 25 chr5 184912695 184912932 -14717218 + MLT1J1 LTR MaLR 40 319 -127 474 213 162 29 chr5 184912943 184913079 -14717071 - MIR SINE MIR -108 154 1 368 310 10 0 chr5 184914044 184914144 -14716006 - MIR SINE MIR -49 213 113 285 346 19 9 chr5 184914323 184914430 -14715720 - MIR SINE MIR -67 195 88 225 261 0 0 chr5 184914756 184914825 -14715325 + (TTA)n Simple_repeat Simple_repeat 2 70 0 800 206 0 7 chr5 184916650 184916805 -14713345 + FRAM SINE Alu 1 154 -22 22 0 0 0 chr5 184917500 184917522 -14712628 + AT_rich Low_complexity Low_complexity 1 22 0 261 243 54 14 chr5 184917549 184917623 -14712527 - MIR SINE MIR -6 256 180 1447 212 3 26 chr5 184918989 184919296 -14710854 + MLT1D LTR MaLR 206 505 0 432 320 34 17 chr5 184919595 184919773 -14710377 - MIR SINE MIR -81 181 1 7871 147 18 5 chr5 184921661 184922943 -14707207 + HSMAR2 DNA Mariner 2 1300 -2 441 263 59 53 chr5 184923026 184923178 -14706972 - MER91A DNA MER1_type -26 170 18 195 189 0 0 chr5 184923602 184923655 -14706495 + T-rich Low_complexity Low_complexity 1 53 0 2081 123 0 3 chr5 184923657 184923967 -14706183 - AluSc SINE Alu 0 309 1 21 0 0 0 chr5 184924813 184924834 -14705316 + AT_rich Low_complexity Low_complexity 1 21 0 263 191 15 0 chr5 184924917 184924985 -14705165 + GA-rich Low_complexity Low_complexity 2 70 0 251 277 181 32 chr5 184926255 184926349 -14703801 + L2 LINE L2 3206 3313 0 436 135 14 0 chr5 184926499 184926573 -14703577 + L1ME LINE L1 5590 5664 -457 25 0 0 0 chr5 184926689 184926714 -14703436 + AT_rich Low_complexity Low_complexity 1 25 0 373 243 39 68 chr5 184926847 184926950 -14703200 + L1MC4 LINE L1 6619 6718 -1324 1941 122 7 7 chr5 184927047 184927350 -14702800 - AluSq SINE Alu -10 303 1 1098 107 0 0 chr5 184927890 184928039 -14702111 + AluSq/x SINE Alu 1 149 -164 1466 227 0 0 chr5 184928447 184928742 -14701408 - AluSg SINE Alu -5 295 1 756 196 0 0 chr5 184928742 184928890 -14701260 + L1MD3 LINE L1 7846 7993 -2 308 330 28 0 chr5 184929031 184929137 -14701013 + MIR SINE MIR 83 191 -71 483 264 45 0 chr5 184929138 184929248 -14700902 + L2 LINE L2 3199 3313 0 390 263 101 78 chr5 184929354 184929587 -14700563 + L1ME3A LINE L1 5765 5947 -223 891 203 21 16 chr5 184929872 184930059 -14700091 + MER5A DNA MER1_type 1 188 -1 416 290 8 15 chr5 184930528 184930659 -14699491 + MLT1J LTR MaLR 287 416 -95 689 283 64 99 chr5 184932708 184933155 -14696995 + L2 LINE L2 2630 3047 -266 1518 56 0 10 chr5 184933155 184933351 -14696799 + L1PA6 LINE L1 5961 6154 0 689 283 64 99 chr5 184933351 184933593 -14696557 + L2 LINE L2 3047 3296 -17 296 273 12 2 chr5 184933599 184933683 -14696467 + MIR3 SINE MIR 76 160 -48 1959 127 0 19 chr5 184933690 184933997 -14696153 - AluSx SINE Alu -10 302 2 343 243 0 48 chr5 184934164 184934267 -14695883 - MER112 DNA MER1_type -133 127 30 204 292 0 56 chr5 184934308 184934380 -14695770 + MIR3 SINE MIR 134 201 -7 798 161 0 0 chr5 184935490 184935608 -14694542 - FLAM_C SINE Alu -15 118 1 294 29 0 0 chr5 184935888 184935923 -14694227 + (CA)n Simple_repeat Simple_repeat 2 36 0 189 0 0 0 chr5 184935922 184935943 -14694207 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 516 206 28 0 chr5 184936313 184936420 -14693730 + MER81 DNA DNA 1 110 -4 691 251 108 5 chr5 184936580 184936696 -14693454 + MIR SINE MIR 20 123 -139 1056 247 70 45 chr5 184936696 184937141 -14693009 + LTR16A1 LTR ERVL 2 457 0 691 251 108 5 chr5 184937141 184937227 -14692923 + MIR SINE MIR 123 243 -19 504 342 101 4 chr5 184937928 184938156 -14691994 - MIR SINE MIR -10 252 3 2007 101 9 55 chr5 184938770 184939097 -14691053 + AluSq SINE Alu 1 312 -1 1336 195 17 20 chr5 184939106 184939398 -14690752 + AluJb SINE Alu 1 291 -21 231 315 33 22 chr5 184939636 184939728 -14690422 + L2 LINE L2 2967 3059 -213 196 51 26 26 chr5 184939990 184940029 -14690121 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 2352 80 0 0 chr5 184940045 184940346 -14689804 + AluY SINE Alu 1 301 -10 2013 98 4 0 chr5 184940365 184940711 -14689439 + AluY SINE Alu 9 355 0 496 268 54 80 chr5 184941394 184941618 -14688532 + MLT1K LTR MaLR 190 407 -181 237 214 0 0 chr5 184941761 184941803 -14688347 - L2 LINE L2 -18 3254 3213 430 285 88 40 chr5 184941808 184942057 -14688093 - MIR SINE MIR 0 262 2 1846 122 34 7 chr5 184942104 184942400 -14687750 + AluSx SINE Alu 1 304 -8 452 336 58 72 chr5 184942746 184943163 -14686987 + L2 LINE L2 2862 3272 0 2024 116 0 10 chr5 184944353 184944646 -14685504 + AluSx SINE Alu 1 290 -22 773 238 0 33 chr5 184944689 184944870 -14685280 - MIR SINE MIR -74 188 14 924 208 61 10 chr5 184945437 184945634 -14684516 + MIR SINE MIR 56 262 0 1675 140 32 7 chr5 184945868 184946146 -14684004 - AluSc SINE Alu -24 285 1 511 319 111 14 chr5 184947485 184947701 -14682449 - MIR SINE MIR -1 261 25 427 281 202 15 chr5 184948465 184948668 -14681482 - MIR SINE MIR -11 251 11 279 54 0 0 chr5 184949094 184949131 -14681019 + (CA)n Simple_repeat Simple_repeat 1 37 0 535 284 117 15 chr5 184950399 184950596 -14679554 + MIR SINE MIR 2 218 -44 2195 73 42 0 chr5 184952558 184952846 -14677304 - AluY SINE Alu -11 300 1 378 282 117 82 chr5 184953144 184953350 -14676800 + MIR SINE MIR 48 260 -2 405 250 46 9 chr5 184954567 184954675 -14675475 - MER103 DNA DNA -52 114 3 8831 183 160 22 chr5 184955331 184957584 -14672566 + L1MDa LINE L1 18 2581 -3959 534 99 0 0 chr5 184957589 184957660 -14672490 + AluS SINE Alu 2 72 -241 1965 89 0 121 chr5 184957695 184958033 -14672117 + AluSp SINE Alu 5 301 -2 2232 89 0 3 chr5 184958082 184958386 -14671764 + AluY SINE Alu 1 303 -8 689 290 86 47 chr5 184958403 184958741 -14671409 + MLT1J LTR MaLR 158 508 -3 466 344 112 0 chr5 184958754 184958978 -14671172 - MIR SINE MIR -13 249 1 227 261 144 18 chr5 184959185 184959296 -14670854 - L2 LINE L2 -2 3270 3146 769 271 31 9 chr5 184960368 184960593 -14669557 + MIR SINE MIR 12 241 -21 317 312 94 56 chr5 184960563 184960778 -14669372 - MIR SINE MIR -8 254 32 * 559 203 158 6 chr5 184960782 184960940 -14669210 + MER5A DNA MER1_type 1 182 -7 221 297 39 10 chr5 184961281 184961402 -14668748 + MIR SINE MIR 84 237 -25 2002 104 0 0 chr5 184961629 184961899 -14668251 + AluSg SINE Alu 1 270 -40 409 306 105 29 chr5 184963496 184963705 -14666445 + MIR SINE MIR 30 254 -8 357 194 32 32 chr5 184964045 184964138 -14666012 - MIR SINE MIR -4 258 166 901 251 21 125 chr5 184964181 184964564 -14665586 + L2 LINE L2 2970 3312 -1 553 175 48 48 chr5 184964562 184964688 -14665462 - MIR SINE MIR -89 173 48 * 255 170 0 0 chr5 184965095 184965142 -14665008 + MIR SINE MIR 81 127 -81 1602 184 3 16 chr5 184965472 184965787 -14664363 + AluJo SINE Alu 1 311 -1 667 246 98 42 chr5 184965802 184965857 -14664293 - MIR SINE MIR -1 261 211 2391 62 3 10 chr5 184965857 184966164 -14663986 - AluY SINE Alu -6 305 1 667 246 98 42 chr5 184966164 184966323 -14663827 - MIR SINE MIR -51 211 35 404 261 61 91 chr5 184967060 184967324 -14662826 - MIR SINE MIR -3 259 4 256 210 62 74 chr5 184967588 184967669 -14662481 + MER91A DNA MER1_type 98 177 -19 454 293 122 42 chr5 184969133 184969396 -14660754 - Charlie8 DNA MER1_type -2132 285 2 200 405 0 0 chr5 184969789 184969863 -14660287 - MIR SINE MIR -21 241 168 581 228 13 25 chr5 184970997 184971155 -14658995 - MER103 DNA DNA -3 163 8 190 341 98 12 chr5 184971343 184971425 -14658725 - L2 LINE L2 -46 3226 3138 1841 122 4 4 chr5 184971588 184971866 -14658284 + AluSp SINE Alu 21 298 -15 353 327 19 19 chr5 184972459 184972618 -14657532 + MLT1K LTR MaLR 126 284 -304 256 270 191 26 chr5 184973076 184973228 -14656922 + MIR SINE MIR 59 235 -27 470 293 67 10 chr5 184973980 184974184 -14655966 + MIR SINE MIR 37 256 -6 342 337 53 24 chr5 184974884 184975053 -14655097 + MIR SINE MIR 20 193 -69 776 187 33 84 chr5 184975190 184975404 -14654746 - MER58A DNA MER1_type -13 211 9 386 277 10 0 chr5 184976913 184977014 -14653136 + MIR3 SINE MIR 96 197 -11 226 292 0 51 chr5 184977186 184977341 -14652809 + CT-rich Low_complexity Low_complexity 1 147 0 204 40 0 0 chr5 184977860 184977885 -14652265 + (T)n Simple_repeat Simple_repeat 1 25 0 210 192 0 0 chr5 184978246 184978298 -14651852 + (TG)n Simple_repeat Simple_repeat 1 52 0 1180 299 88 35 chr5 184978433 184979190 -14650960 - L2 LINE L2 0 3313 2520 2325 68 0 7 chr5 184980049 184980345 -14649805 + AluSc SINE Alu 1 294 -15 315 262 135 40 chr5 184982970 184983096 -14647054 + MIR SINE MIR 119 256 -6 391 337 21 27 chr5 184983138 184983325 -14646825 + MER5A DNA MER1_type 1 186 -3 502 238 217 0 chr5 184983350 184983493 -14646657 + MER5A DNA MER1_type 16 189 0 779 271 39 9 chr5 184984426 184984655 -14645495 + MIR SINE MIR 1 236 -26 1851 188 19 27 chr5 184984708 184985081 -14645069 + MLT1B LTR MaLR 21 390 0 321 320 109 8 chr5 184985083 184985211 -14644939 - MIR SINE MIR -102 160 20 2228 87 3 0 chr5 184985701 184985999 -14644151 - AluSc SINE Alu -9 300 2 1950 139 10 0 chr5 184986134 184986443 -14643707 - AluSx SINE Alu 0 312 1 1781 159 0 3 chr5 184986553 184986848 -14643302 - AluSx SINE Alu -18 294 1 362 287 0 10 chr5 184987060 184987161 -14642989 - MIR SINE MIR -85 123 24 479 268 42 24 chr5 184987286 184987454 -14642696 - MIR SINE MIR -8 254 84 252 323 157 40 chr5 184987900 184988098 -14642052 + MIR SINE MIR 2 222 -40 468 0 0 0 chr5 184988117 184988169 -14641981 + (TA)n Simple_repeat Simple_repeat 2 53 0 837 266 13 53 chr5 184988248 184988474 -14641676 + MIR SINE MIR 13 229 -33 486 256 6 79 chr5 184988922 184989086 -14641064 + MLT1K LTR MaLR 412 563 -25 201 121 0 0 chr5 184989729 184989762 -14640388 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 192 288 88 64 chr5 184990143 184990268 -14639882 - MIR SINE MIR -70 192 65 297 0 0 0 chr5 184991013 184991046 -14639104 + (TG)n Simple_repeat Simple_repeat 2 34 0 200 272 22 76 chr5 184991085 184991177 -14638973 + L2 LINE L2 3163 3249 -23 186 43 0 0 chr5 184992212 184992235 -14637915 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 353 333 17 23 chr5 184992352 184992529 -14637621 - MER117 DNA MER1_type -8 189 14 2286 90 0 10 chr5 184992541 184992852 -14637298 + AluSc SINE Alu 1 308 -1 874 199 100 8 chr5 184993019 184993270 -14636880 + ORSL DNA AcHobo 2 275 0 1984 131 3 0 chr5 184994115 184994412 -14635738 - AluSx SINE Alu -14 298 1 1057 161 17 68 chr5 184994455 184994691 -14635459 - L1MB2 LINE L1 -7 6164 5941 277 242 30 0 chr5 184994925 184994991 -14635159 + MIR SINE MIR 77 144 -118 502 303 13 0 chr5 184995151 184995306 -14634844 - MIR SINE MIR -99 163 7 373 232 14 0 chr5 184996563 184996705 -14633445 + (TCCA)n Simple_repeat Simple_repeat 4 147 0 401 367 66 19 chr5 184996736 184996992 -14633158 - L2 LINE L2 -67 3205 2938 253 256 34 60 chr5 184997117 184997234 -14632916 - L2 LINE L2 -508 2806 2693 2128 120 0 0 chr5 184997238 184997541 -14632609 + AluSg SINE Alu 1 303 0 345 247 0 0 chr5 184997544 184997641 -14632509 + (CA)n Simple_repeat Simple_repeat 2 98 0 630 254 60 23 chr5 184998142 184998359 -14631791 - MIR SINE MIR -28 234 10 221 294 98 0 chr5 185000002 185000094 -14630056 + MIR SINE MIR 160 260 -2 286 160 2 15 chr5 185000200 185000266 -14629884 - MLT1J2 LTR MaLR -29 421 351 451 164 136 50 chr5 185000322 185000462 -14629688 - MLT1J LTR MaLR -254 257 106 1446 188 68 4 chr5 185000544 185000842 -14629308 + AluJb SINE Alu 1 315 0 589 329 73 5 chr5 185000905 185001124 -14629026 - MIR SINE MIR -27 235 2 234 0 0 0 chr5 185001929 185001955 -14628195 + (CA)n Simple_repeat Simple_repeat 1 26 0 190 265 0 0 chr5 185002180 185002229 -14627921 + L2 LINE L2 2928 2976 -337 3033 284 111 20 chr5 185002233 185003763 -14626387 - L2 LINE L2 -730 2584 917 278 317 106 28 chr5 185003761 185003903 -14626247 + MIR3 SINE MIR 20 172 -36 * 295 194 139 0 chr5 185003960 185004032 -14626118 + MIR SINE MIR 81 162 -100 352 175 206 10 chr5 185004039 185004136 -14626014 + L2 LINE L2 3187 3302 -11 246 136 0 0 chr5 185004136 185004180 -14625970 + (TTGG)n Simple_repeat Simple_repeat 1 44 0 489 76 0 0 chr5 185005925 185005991 -14624159 + (CA)n Simple_repeat Simple_repeat 2 67 0 626 169 14 56 chr5 185006267 185006409 -14623741 + MLT1A1 LTR MaLR 1 136 -229 6649 74 5 27 chr5 185006923 185008449 -14621701 - L1PA7 LINE L1 -4 6150 4636 538 162 114 6 chr5 185008449 185008616 -14621534 + L1P LINE L1 4375 4559 -1587 4188 65 21 35 chr5 185008750 185009582 -14620568 - L1P3 LINE L1 -580 5574 4763 3416 87 71 4 chr5 185009572 185010079 -14620071 + L1P3 LINE L1 4200 4740 -1406 * 862 252 93 20 chr5 185010081 185010383 -14619767 + L2 LINE L2 2990 3313 0 363 317 84 0 chr5 185010592 185010759 -14619391 + MIR SINE MIR 66 246 -16 450 319 144 30 chr5 185011432 185011904 -14618246 + L2 LINE L2 2524 3046 -226 1117 236 5 0 chr5 185012002 185012214 -14617936 - MER58A DNA MER1_type -11 213 1 220 206 38 153 chr5 185012454 185012585 -14617565 - MIR SINE MIR -41 221 106 198 0 0 0 chr5 185013678 185013700 -14616450 + (A)n Simple_repeat Simple_repeat 1 22 0 219 336 71 9 chr5 185014137 185014250 -14615900 + L2 LINE L2 3192 3311 -2 378 265 20 0 chr5 185014938 185015040 -14615110 + MER5A DNA MER1_type 9 112 -77 546 295 40 13 chr5 185015085 185015312 -14614838 + MIR SINE MIR 13 245 -17 442 291 29 29 chr5 185015852 185016024 -14614126 - MIR SINE MIR -34 228 57 1730 166 32 11 chr5 185021120 185021428 -14608722 - AluJb SINE Alu 0 312 1 23 0 0 53 chr5 185021434 185021453 -14608697 + AT_rich Low_complexity Low_complexity 1 19 -17 1784 161 17 0 chr5 185021453 185021744 -14608406 - AluSx SINE Alu -16 296 1 23 0 0 53 chr5 185021744 185021762 -14608388 + AT_rich Low_complexity Low_complexity 19 36 0 199 267 0 0 chr5 185021872 185021917 -14608233 - L2 LINE L2 -8 3305 3261 363 304 89 60 chr5 185022203 185022788 -14607362 - L2 LINE L2 -11 3261 2565 402 276 45 0 chr5 185023296 185023430 -14606720 + MIR SINE MIR 123 262 0 517 286 105 19 chr5 185024075 185024160 -14605990 - MIR SINE MIR -19 243 167 419 92 0 184 chr5 185024160 185024202 -14605948 + MADE1 DNA Mariner 1 17 -63 1971 121 18 3 chr5 185024202 185024484 -14605666 - AluSx SINE Alu -24 288 3 419 92 0 184 chr5 185024484 185024539 -14605611 + MADE1 DNA Mariner 17 80 0 517 286 105 19 chr5 185024539 185024663 -14605487 - MIR SINE MIR -95 167 16 237 83 0 0 chr5 185025840 185025876 -14604274 + (GA)n Simple_repeat Simple_repeat 1 36 0 252 0 0 0 chr5 185026403 185026431 -14603719 + (TC)n Simple_repeat Simple_repeat 1 28 0 242 274 78 72 chr5 185026962 185027115 -14603035 - MIR SINE MIR -106 156 3 195 325 48 0 chr5 185027403 185027486 -14602664 + MIR3 SINE MIR 98 184 -24 241 277 43 0 chr5 185027652 185027746 -14602404 - L1MC4 LINE L1 -19 8023 7926 768 179 30 8 chr5 185027772 185027906 -14602244 + MER6A DNA MER2_type 1 137 -468 2810 238 162 37 chr5 185027974 185028999 -14601151 - L1ME3A LINE L1 -4 6166 5270 2203 121 0 0 chr5 185028999 185029288 -14600862 - AluSx SINE Alu -23 289 1 2810 238 162 37 chr5 185029288 185029799 -14600351 - L1ME3A LINE L1 -900 5270 4824 2317 84 3 0 chr5 185029799 185030085 -14600065 - AluSc SINE Alu -22 287 1 2810 238 162 37 chr5 185030085 185030239 -14599911 - L1ME3A LINE L1 -1346 4824 4259 823 67 28 196 chr5 185030237 185030416 -14599734 + L1PA10 LINE L1 6020 6168 0 * 700 282 105 9 chr5 185030561 185030884 -14599266 - L1ME3A LINE L1 -1957 4189 3836 1918 132 17 14 chr5 185031175 185031470 -14598680 - AluSx SINE Alu -16 296 1 4470 216 121 32 chr5 185032155 185033819 -14596331 - L1MC3 LINE L1 -11 7843 6033 1703 255 83 74 chr5 185033816 185037405 -14592745 - L1MC3 LINE L1 -746 5469 1925 * 221 375 0 0 chr5 185037670 185037758 -14592392 + MIR SINE MIR 149 236 -26 947 218 79 0 chr5 185037762 185037964 -14592186 - MER20 DNA MER1_type 0 219 2 1245 245 77 37 chr5 185038705 185039133 -14591017 + MLT1J2 LTR MaLR 6 450 0 383 269 143 17 chr5 185039383 185039558 -14590592 + MIR SINE MIR 49 245 -17 216 0 0 0 chr5 185041004 185041028 -14589122 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 350 297 94 14 chr5 185042221 185042359 -14587791 + L2 LINE L2 3123 3271 -1 370 224 163 77 chr5 185042421 185042667 -14587483 + MER102b DNA MER1_type 49 315 -26 293 309 49 49 chr5 185042808 185043012 -14587138 + MIR SINE MIR 49 252 -10 2357 107 0 10 chr5 185043012 185043322 -14586828 + AluSg SINE Alu 1 307 -3 2150 102 46 0 chr5 185043322 185043606 -14586544 + AluSg SINE Alu 1 297 -13 1128 238 128 60 chr5 185043979 185044038 -14586112 + LTR33 LTR ERVL 42 96 -425 939 135 259 108 chr5 185044038 185044297 -14585853 - AluJo SINE Alu -4 298 1 1128 238 128 60 chr5 185044297 185044683 -14585467 + LTR33 LTR ERVL 96 517 -4 21 0 0 0 chr5 185045966 185045987 -14584163 + AT_rich Low_complexity Low_complexity 1 21 0 311 291 35 35 chr5 185046444 185046585 -14583565 + MIR SINE MIR 24 164 -98 337 321 28 9 chr5 185046786 185046895 -14583255 - MIR SINE MIR -58 150 40 529 328 54 10 chr5 185048044 185048248 -14581902 + MLT1K LTR MaLR 19 231 -357 417 248 0 94 chr5 185048348 185048497 -14581653 + MLT1K LTR MaLR 448 582 -6 21 0 0 0 chr5 185049223 185049244 -14580906 + AT_rich Low_complexity Low_complexity 1 21 0 486 302 95 13 chr5 185049812 185050044 -14580106 + MIR SINE MIR 12 262 0 597 261 100 96 chr5 185050818 185051316 -14578834 + MLT1H1 LTR MaLR 1 500 -67 6841 116 73 38 chr5 185051316 185051974 -14578176 + Tigger3b DNA MER2_type 1 634 -2394 2472 52 0 7 chr5 185051974 185052265 -14577885 + AluY SINE Alu 1 289 -22 6841 116 73 38 chr5 185052265 185052538 -14577612 + Tigger3b DNA MER2_type 634 896 -2132 725 206 0 22 chr5 185052538 185052674 -14577476 + FLAM_A SINE Alu 1 133 0 6841 116 73 38 chr5 185052674 185052930 -14577220 + Tigger3b DNA MER2_type 896 1231 0 227 276 0 0 chr5 185052947 185053005 -14577145 + MLT1H1 LTR MaLR 538 595 0 268 156 0 0 chr5 185104070 185104115 -14526035 + L1MA9 LINE L1 6064 6108 -204 4779 189 102 5 chr5 185104125 185105175 -14524975 + L1PBa LINE L1 6 1157 -5706 5421 134 24 6 chr5 185105179 185106112 -14524038 + L1PBa LINE L1 1311 2318 -4545 414 239 21 84 chr5 185106265 185106407 -14523743 + MIR3 SINE MIR 13 145 -63 264 291 0 0 chr5 185106466 185106545 -14523605 - MER103 DNA DNA -77 89 11 318 304 43 0 chr5 185106674 185106766 -14523384 + LTR67 LTR ERVL 92 187 -370 372 303 45 8 chr5 185107793 185107925 -14522225 - MER5B DNA MER1_type -2 176 40 226 113 278 0 chr5 185108415 185108530 -14521620 - L1PB3 LINE L1 -206 5948 5802 7188 161 25 29 chr5 185108638 185108965 -14521185 - L1PB3 LINE L1 -366 5788 5461 6362 87 32 0 chr5 185108965 185109122 -14521028 + L1PA10 LINE L1 5080 5231 -937 2387 87 0 0 chr5 185109122 185109422 -14520728 + AluY SINE Alu 1 300 -11 6362 87 32 0 chr5 185109422 185110337 -14519813 + L1PA10 LINE L1 5231 6168 0 7188 161 25 29 chr5 185110337 185111903 -14518247 - L1PB3 LINE L1 -693 5461 3908 205 239 0 0 chr5 185112372 185112418 -14517732 + (CGG)n Simple_repeat Simple_repeat 2 47 0 210 232 71 0 chr5 185112984 185113040 -14517110 - MIR SINE MIR -79 129 70 186 264 38 0 chr5 185113331 185113384 -14516766 + MIR SINE MIR 78 132 -76 353 341 0 0 chr5 185113709 185113847 -14516303 + (CA)n Simple_repeat Simple_repeat 1 138 0 222 136 0 0 chr5 185114047 185114091 -14516059 + (CA)n Simple_repeat Simple_repeat 2 45 0 253 218 18 0 chr5 185114674 185114729 -14515421 - MIR3 SINE MIR -4 204 149 2235 194 17 104 chr5 185114898 185115611 -14514539 + L1ME1 LINE L1 5511 6161 -5 7339 238 45 30 chr5 185115616 185115842 -14514308 + L1ME3A LINE L1 1847 2068 -4147 180 77 0 0 chr5 185115842 185115868 -14514282 + (TAAAA)n Simple_repeat Simple_repeat 3 28 0 7339 238 45 30 chr5 185115868 185116696 -14513454 + L1ME3A LINE L1 2068 2882 -3333 2011 14 0 0 chr5 185116696 185116914 -14513236 + AluYa5 SINE Alu 86 303 -8 7339 238 45 30 chr5 185116914 185118338 -14511812 + L1ME3A LINE L1 2882 4334 -1881 1743 169 39 9 chr5 185118338 185118675 -14511475 + L1PB4 LINE L1 5807 6153 -3 7339 238 45 30 chr5 185118675 185118985 -14511165 + L1ME3A LINE L1 4334 4638 -1577 357 318 78 0 chr5 185119677 185119831 -14510319 - MIR SINE MIR -72 190 25 358 317 21 7 chr5 185120167 185120312 -14509838 - MER117 DNA MER1_type -50 147 1 248 274 36 24 chr5 185120592 185120676 -14509474 + MER5B DNA MER1_type 6 90 -88 483 257 123 21 chr5 185120707 185120991 -14509159 + L1ME3A LINE L1 5694 6006 -233 434 257 88 60 chr5 185121414 185121663 -14508487 + L1ME4a LINE L1 5692 5947 -174 4671 188 20 31 chr5 185122160 185123251 -14506899 + L1MA9 LINE L1 5203 6282 -30 3044 236 66 15 chr5 185123283 185124167 -14505983 + L1ME1 LINE L1 4875 5847 -388 2101 110 3 20 chr5 185124167 185124466 -14505684 + AluSg SINE Alu 1 294 -16 3044 236 66 15 chr5 185124466 185124871 -14505279 + L1ME1 LINE L1 5847 6230 -5 393 191 61 26 chr5 185125331 185125446 -14504704 + LTR33 LTR ERVL 403 521 0 2279 114 0 13 chr5 185125690 185126006 -14504144 - AluSx SINE Alu 0 312 1 2356 121 13 26 chr5 185126195 185126575 -14503575 + THE1C LTR MaLR 1 375 0 351 217 62 39 chr5 185126721 185126850 -14503300 + MLT1K LTR MaLR 197 328 -260 292 203 17 0 chr5 185128041 185128100 -14502050 - MIR SINE MIR -33 229 170 1063 269 111 21 chr5 185128116 185128495 -14501655 + MLT1J2 LTR MaLR 1 413 -37 484 229 36 21 chr5 185128825 185128965 -14501185 - MER103 DNA DNA -3 163 22 304 337 11 70 chr5 185129004 185129191 -14500959 - MIR3 SINE MIR -28 180 5 258 136 0 0 chr5 185130623 185130667 -14499483 + (TGAA)n Simple_repeat Simple_repeat 4 47 0 311 267 0 33 chr5 185130871 185130961 -14499189 + LTR33 LTR ERVL 24 110 -411 592 296 75 0 chr5 185131011 185131210 -14498940 + LTR33 LTR ERVL 203 416 -105 2047 109 0 0 chr5 185131210 185131485 -14498665 - AluSg1 SINE Alu 0 309 35 294 308 280 0 chr5 185132936 185133079 -14497071 + MER5A DNA MER1_type 7 189 0 477 335 60 5 chr5 185133397 185133612 -14496538 + L2 LINE L2 2731 2957 -357 1702 136 82 119 chr5 185133616 185133968 -14496182 + Charlie3 DNA MER1_type 1 2712 0 1271 198 69 3 chr5 185133968 185134332 -14495818 + L1M4 LINE L1 5171 5549 -635 286 302 12 0 chr5 185134504 185134590 -14495560 - MIR SINE MIR -79 129 43 245 234 201 52 chr5 185134773 185134927 -14495223 - MIR SINE MIR -58 204 28 612 115 0 0 chr5 185135742 185135829 -14494321 + AluJ/FLAM SINE Alu 1 87 -225 324 224 15 0 chr5 185137351 185137418 -14492732 + L2 LINE L2 3205 3272 0 348 271 16 112 chr5 185138004 185138255 -14491895 + MIR SINE MIR 8 234 -28 205 271 141 12 chr5 185138289 185138374 -14491776 + MIR SINE MIR 125 220 -42 3838 155 2 3 chr5 185138375 185138976 -14491174 + MER7C DNA MER2_type 1 600 -2 1725 170 24 0 chr5 185140305 185140594 -14489556 + MER58B DNA MER1_type 1 296 -45 524 278 41 69 chr5 185140722 185140967 -14489183 + MIR SINE MIR 8 245 -17 282 188 0 0 chr5 185142371 185142419 -14487731 + Charlie8 DNA MER1_type 2355 2402 -15 941 160 29 11 chr5 185143453 185143628 -14486522 + MER5B DNA MER1_type 1 178 0 933 151 23 0 chr5 185143903 185144075 -14486075 + MER5A DNA MER1_type 13 188 -1 345 307 30 35 chr5 185144155 185144357 -14485793 + MIR SINE MIR 50 250 -12 623 302 71 4 chr5 185144625 185144850 -14485300 + MIR SINE MIR 15 254 -8 221 338 131 28 chr5 185145059 185145204 -14484946 - MIR SINE MIR -83 179 20 2361 118 26 9 chr5 185145342 185145691 -14484459 - THE1A LTR MaLR 0 355 1 217 222 0 0 chr5 185145816 185145861 -14484289 + (TG)n Simple_repeat Simple_repeat 1 45 0 1509 181 22 37 chr5 185146737 185147058 -14483092 - L1MB4 LINE L1 0 6180 5865 3989 137 24 59 chr5 185146749 185147068 -14483082 - L1MB4 LINE L1 -12 6168 5839 1947 154 3 25 chr5 185147068 185147387 -14482763 - AluJb SINE Alu 0 312 1 3989 137 24 59 chr5 185147387 185147812 -14482338 - L1MB4 LINE L1 -341 5839 5450 405 281 186 18 chr5 185148192 185148413 -14481737 + MIR SINE MIR 5 262 0 350 272 18 11 chr5 185149412 185149534 -14480616 + MIR SINE MIR 59 145 -63 282 307 50 0 chr5 185149718 185149819 -14480331 - Charlie8 DNA MER1_type -2216 201 96 2004 96 37 0 chr5 185149839 185150110 -14480040 + AluSc SINE Alu 1 281 -28 1052 173 77 24 chr5 185150482 185150690 -14479460 + MER20 DNA MER1_type 1 219 0 285 252 75 19 chr5 185150950 185151057 -14479093 - MIR SINE MIR -76 132 20 723 202 24 18 chr5 185151485 185151653 -14478497 + MER5B DNA MER1_type 7 175 -3 427 306 27 27 chr5 185151665 185151812 -14478338 - MIR SINE MIR -110 152 6 600 258 127 5 chr5 185153158 185153379 -14476771 - MIR SINE MIR -12 250 3 1714 170 3 23 chr5 185153546 185153846 -14476304 - AluJb SINE Alu -16 296 3 2216 231 53 16 chr5 185154086 185154648 -14475502 + MLT1G LTR MaLR 1 583 -7 355 223 21 32 chr5 185154665 185154759 -14475391 - MIR SINE MIR -20 242 150 672 240 71 33 chr5 185155128 185155311 -14474839 - MIR3 SINE MIR -15 193 4 2319 87 0 0 chr5 185158922 185159208 -14470942 + AluSg SINE Alu 1 286 -24 567 125 0 0 chr5 185159247 185159327 -14470823 - MADE1 DNA Mariner 0 80 1 942 279 124 29 chr5 185159355 185159839 -14470311 - MLT1F LTR MaLR -12 530 1 222 355 85 26 chr5 185160411 185160600 -14469550 - MIR3 SINE MIR -5 203 4 393 261 25 8 chr5 185161711 185161830 -14468320 + MIR SINE MIR 20 140 -122 186 279 88 0 chr5 185161884 185161952 -14468198 + MIR SINE MIR 160 233 -29 234 0 0 0 chr5 185163271 185163297 -14466853 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 1620 218 28 42 chr5 185163583 185164014 -14466136 - MLT1C LTR MaLR -1 466 42 602 163 0 101 chr5 185164236 185164365 -14465785 - FRAM SINE Alu -39 137 22 237 65 0 0 chr5 185164411 185164442 -14465708 + (TG)n Simple_repeat Simple_repeat 2 32 0 4443 134 49 9 chr5 185165236 185166164 -14463986 + L1MA5 LINE L1 5237 6299 -1 237 274 48 48 chr5 185166826 185166950 -14463200 + MIR SINE MIR 126 249 -13 367 327 42 18 chr5 185167020 185167188 -14462962 + L2 LINE L2 2932 3103 -169 283 336 29 19 chr5 185168116 185168220 -14461930 + L2 LINE L2 3001 3105 -167 1479 256 67 83 chr5 185168944 185169646 -14460504 - L1ME3A LINE L1 -13 6226 5536 2176 131 0 3 chr5 185169652 185169965 -14460185 - AluSx SINE Alu 0 312 1 958 273 80 7 chr5 185169969 185170408 -14459742 - L1ME3A LINE L1 -1375 4840 4370 352 294 0 17 chr5 185170467 185170586 -14459564 - L1ME3A LINE L1 -4653 1743 1627 * 427 225 41 30 chr5 185170580 185170749 -14459401 - L1MC5 LINE L1 -367 7594 7424 182 250 39 0 chr5 185172289 185172341 -14457809 - MIR SINE MIR -49 213 160 233 198 271 0 chr5 185172418 185172514 -14457636 + MIR SINE MIR 125 246 -16 4813 76 3 8 chr5 185172545 185173190 -14456960 + L1PA13 LINE L1 5335 5976 -187 760 299 25 12 chr5 185173939 185174180 -14455970 - MIR SINE MIR -11 251 8 233 291 218 0 chr5 185174927 185175037 -14455113 - L2 LINE L2 0 3313 3180 820 348 94 11 chr5 185175063 185175615 -14454535 + L2 LINE L2 2121 2718 -596 312 247 59 12 chr5 185176221 185176306 -14453844 - MER5B DNA MER1_type -28 150 62 591 317 94 5 chr5 185177039 185177263 -14452887 + MIR SINE MIR 15 258 -4 1920 149 3 7 chr5 185178053 185178349 -14451801 + AluJb SINE Alu 1 295 -17 329 353 59 0 chr5 185178464 185178600 -14451550 - MIR SINE MIR -72 190 47 230 239 0 0 chr5 185178682 185178728 -14451422 + L2 LINE L2 3268 3313 0 4107 194 50 10 chr5 185179251 185180056 -14450094 + Charlie1a DNA MER1_type 1 837 -618 603 120 51 34 chr5 185180057 185180174 -14449976 + L1PA8 LINE L1 6052 6170 -2 648 305 85 12 chr5 185180373 185180632 -14449518 + L1MC/D LINE L1 5380 5657 -2151 249 150 0 0 chr5 185180714 185180754 -14449396 + Charlie1a DNA MER1_type 855 894 -561 5105 51 0 2 chr5 185180785 185181377 -14448773 - L1PA6 LINE L1 -1 6153 5563 5355 69 17 17 chr5 185181518 185182467 -14447683 - L1PA7 LINE L1 -161 5993 5045 2594 171 45 27 chr5 185182467 185183029 -14447121 + Charlie1a DNA MER1_type 884 1455 0 450 246 159 7 chr5 185184076 185184214 -14445936 + MIR SINE MIR 2 160 -102 547 310 81 16 chr5 185184433 185184691 -14445459 - L3 LINE CR1 -520 1057 783 817 90 25 160 chr5 185184701 185184901 -14445249 - L1MA9 LINE L1 -47 6265 6093 6465 161 10 9 chr5 185184948 185186486 -14443664 - L1PB1 LINE L1 -1 6150 4615 197 83 28 0 chr5 185186486 185186522 -14443628 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2128 116 0 0 chr5 185186525 185186802 -14443348 - AluSc SINE Alu -32 277 1 6465 161 10 9 chr5 185186802 185187458 -14442692 - L1PB1 LINE L1 -1537 4614 3956 770 100 111 22 chr5 185187459 185187639 -14442511 - L1PA7 LINE L1 -6 6148 5953 540 287 112 19 chr5 185187811 185188069 -14442081 + L2 LINE L2 3032 3313 0 275 386 71 0 chr5 185188472 185188612 -14441538 - L2 LINE L2 -213 3059 2910 325 264 66 8 chr5 185189267 185189388 -14440762 + Charlie8 DNA MER1_type 38 165 -2252 840 246 12 71 chr5 185190227 185190479 -14439671 - MIR SINE MIR -24 238 2 2265 108 3 0 chr5 185190615 185190920 -14439230 - AluSx SINE Alu -6 306 1 222 160 27 14 chr5 185191253 185191297 -14438853 + MIR3 SINE MIR 108 154 -54 975 129 134 0 chr5 185191537 185191593 -14438557 + L1MA9 LINE L1 6093 6140 -172 258 32 0 0 chr5 185191593 185191624 -14438526 + (CA)n Simple_repeat Simple_repeat 2 32 0 975 129 134 0 chr5 185191624 185191761 -14438389 + L1MA9 LINE L1 6140 6312 0 1944 117 43 0 chr5 185191956 185192237 -14437913 + AluSx SINE Alu 1 293 -19 643 239 51 0 chr5 185192271 185192409 -14437741 + L1MD2 LINE L1 6000 6144 -215 877 176 93 15 chr5 185192448 185192653 -14437497 + L1MD2 LINE L1 6139 6359 0 1821 135 33 26 chr5 185193330 185193633 -14436517 + AluSq SINE Alu 1 305 -8 29 0 0 0 chr5 185193811 185193840 -14436310 + AT_rich Low_complexity Low_complexity 1 29 0 391 290 126 65 chr5 185193988 185194329 -14435821 - L2 LINE L2 0 3272 2911 534 251 66 6 chr5 185194644 185194811 -14435339 - MER104 DNA MER2_type 0 180 4 257 299 163 27 chr5 185194874 185195021 -14435129 + MIR3 SINE MIR 20 186 -22 902 145 87 6 chr5 185195279 185195451 -14434699 + MLT1C LTR MaLR 1 186 -281 7798 176 14 37 chr5 185195469 185196197 -14433953 + L1PB4 LINE L1 3513 4256 -1900 1597 180 26 23 chr5 185196197 185196503 -14433647 + AluJo SINE Alu 1 307 -5 7798 176 14 37 chr5 185196503 185198583 -14431567 + L1PB4 LINE L1 4256 6154 -2 2196 101 0 16 chr5 185198585 185198921 -14431229 + AluSc SINE Alu 1 309 0 616 220 28 28 chr5 185199086 185199227 -14430923 + MIR SINE MIR 51 191 -71 825 257 14 19 chr5 185199244 185199454 -14430696 - MIR SINE MIR -1 261 53 1276 143 91 56 chr5 185199454 185199741 -14430409 + MLT1C LTR MaLR 171 467 0 2061 120 3 13 chr5 185199765 185200064 -14430086 + AluSx SINE Alu 1 296 -16 211 296 143 20 chr5 185200480 185200578 -14429572 - MER5A DNA MER1_type -69 120 11 585 198 140 6 chr5 185200660 185200817 -14429333 - MER5B DNA MER1_type 0 178 1 467 289 26 37 chr5 185200824 185201014 -14429136 + MIR SINE MIR 72 259 -3 190 280 0 20 chr5 185201252 185201302 -14428848 + MIR3 SINE MIR 9 57 -151 3814 211 21 31 chr5 185201324 185202101 -14428049 - L1M4 LINE L1 -1275 4871 4106 2047 137 3 13 chr5 185202101 185202408 -14427742 + AluSx SINE Alu 1 304 -8 3814 211 21 31 chr5 185202408 185202698 -14427452 - L1M4 LINE L1 -2040 4106 3815 1702 219 97 21 chr5 185202741 185203450 -14426700 - L1MC5 LINE L1 -44 7917 7155 490 336 52 62 chr5 185203950 185204608 -14425542 + L2 LINE L2 2193 2843 -471 318 217 43 0 chr5 185204836 185204905 -14425245 + L2 LINE L2 3234 3305 -8 241 338 211 19 chr5 185205469 185205682 -14424468 + L3 LINE CR1 141 394 -1183 247 339 115 6 chr5 185205969 185206143 -14424007 - MIR SINE MIR -64 198 6 465 279 1 0 chr5 185207104 185207215 -14422935 + MIR SINE MIR 35 146 -62 218 235 184 10 chr5 185207349 185207447 -14422703 - L3 LINE CR1 -117 1460 1346 258 32 0 0 chr5 185208206 185208237 -14421913 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 399 254 26 26 chr5 185208237 185208351 -14421799 - L2 LINE L2 -14 3299 3186 557 309 17 0 chr5 185208470 185208651 -14421499 - Charlie8 DNA MER1_type -2131 286 103 256 328 49 62 chr5 185208749 185208899 -14421251 + MIR SINE MIR 3 149 -67 1119 264 97 28 chr5 185208922 185209387 -14420763 - LTR33 LTR ERVL -9 512 16 696 182 8 0 chr5 185210216 185210348 -14419802 - MER105 DNA DNA -56 148 16 758 306 31 37 chr5 185210363 185210687 -14419463 - MLT1I LTR MaLR -48 361 40 454 319 39 58 chr5 185210747 185211007 -14419143 + L1ME4a LINE L1 5648 5902 -219 22 0 0 0 chr5 185211010 185211032 -14419118 + AT_rich Low_complexity Low_complexity 1 22 0 394 255 91 5 chr5 185211200 185211408 -14418742 + L1MC4a LINE L1 5691 5916 -1892 21 57 0 0 chr5 185211607 185211642 -14418508 + AT_rich Low_complexity Low_complexity 1 35 0 27 0 0 0 chr5 185212395 185212422 -14417728 + AT_rich Low_complexity Low_complexity 1 27 0 368 323 73 18 chr5 185212694 185212858 -14417292 + L1ME4a LINE L1 5729 5901 -220 246 307 0 53 chr5 185212865 185212940 -14417210 + L2 LINE L2 3225 3295 -18 285 279 0 0 chr5 185212988 185213067 -14417083 + L1ME4a LINE L1 5965 6043 -78 335 193 0 0 chr5 185213068 185213125 -14417025 + MER5B DNA MER1_type 122 178 0 284 281 71 55 chr5 185213151 185213423 -14416727 - MIR SINE MIR -36 172 9 531 282 39 6 chr5 185215066 185215222 -14414928 + MIR SINE MIR 30 190 -72 875 233 68 13 chr5 185215613 185216006 -14414144 - L1ME4a LINE L1 -115 6006 5579 2312 130 57 43 chr5 185216322 185216745 -14413405 - MSTB1 LTR MaLR -3 429 1 189 0 0 0 chr5 185217286 185217307 -14412843 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 188 222 0 0 chr5 185217315 185217351 -14412799 - L2 LINE L2 -9 3263 3228 459 294 0 20 chr5 185217587 185217733 -14412417 + MIR3 SINE MIR 18 160 -48 2083 136 0 3 chr5 185217857 185218152 -14411998 + AluSq SINE Alu 3 296 -17 1752 187 68 52 chr5 185218156 185218653 -14411497 + MLT1D LTR MaLR 1 505 0 411 293 78 11 chr5 185219162 185219353 -14410797 + MIR SINE MIR 47 250 -12 362 125 29 10 chr5 185219418 185219522 -14410628 + (TA)n Simple_repeat Simple_repeat 2 107 0 279 329 41 86 chr5 185219561 185219804 -14410346 - L2 LINE L2 -112 3160 2929 1522 192 4 18 chr5 185220204 185220485 -14409665 + AluJo SINE Alu 5 281 -31 194 81 27 0 chr5 185220491 185220528 -14409622 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 207 403 67 20 chr5 185220661 185220810 -14409340 + L2 LINE L2 2868 3023 -249 2487 227 31 90 chr5 185221425 185222499 -14407651 - MER63D DNA MER1_type -51 1010 1 352 257 18 0 chr5 185223700 185223809 -14406341 + MER103 DNA DNA 1 111 -55 335 302 135 0 chr5 185224173 185224337 -14405813 + MIR SINE MIR 2 183 -65 231 281 172 11 chr5 185224410 185224531 -14405619 - MER5A DNA MER1_type -6 172 35 180 179 0 0 chr5 185226027 185226066 -14404084 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 371 298 84 23 chr5 185226066 185226197 -14403953 - L2 LINE L2 0 3272 3134 351 0 0 0 chr5 185226209 185226248 -14403902 + (TA)n Simple_repeat Simple_repeat 1 39 0 861 221 0 31 chr5 185226317 185226543 -14403607 + L1MB8 LINE L1 5892 6110 -68 275 310 153 26 chr5 185226543 185226811 -14403339 - MLT1K LTR MaLR -155 433 132 202 281 0 35 chr5 185228276 185228333 -14401817 + L3 LINE CR1 1516 1570 -7 370 321 66 15 chr5 185228883 185229079 -14401071 - L2 LINE L2 -1120 2194 1989 * 412 297 66 8 chr5 185229078 185229258 -14400892 - MIR SINE MIR -33 229 27 339 25 0 0 chr5 185229581 185229621 -14400529 + (TA)n Simple_repeat Simple_repeat 2 41 0 540 36 36 0 chr5 185230498 185230581 -14399569 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 703 204 34 45 chr5 185230594 185230770 -14399380 - MIR SINE MIR -29 233 60 253 343 61 28 chr5 185231376 185231589 -14398561 + Charlie8 DNA MER1_type 66 285 -2132 256 324 14 0 chr5 185231731 185231805 -14398345 + L2 LINE L2 3188 3262 -10 298 233 10 68 chr5 185232983 185233086 -14397064 - L3 LINE CR1 -3 1574 1478 * 458 317 183 31 chr5 185233057 185233445 -14396705 - L2 LINE L2 0 3313 2867 271 52 0 0 chr5 185233795 185233839 -14396311 + MLT2A1 LTR ERVL 1 36 -408 11609 67 5 1 chr5 185233839 185235381 -14394769 + HERVL-A2 LTR ERVL 2760 4306 -1348 3682 100 14 7 chr5 185235371 185235922 -14394228 + HERVL-A2 LTR ERVL 5002 5556 -98 * 940 201 30 19 chr5 185236023 185236423 -14393727 + MLT2A2 LTR ERVL 149 453 0 255 233 8 42 chr5 185236504 185236579 -14393571 + MER113 DNA MER1_type? 1 72 -449 1829 169 3 13 chr5 185236579 185236887 -14393263 - AluJo SINE Alu -7 305 1 255 233 8 42 chr5 185236887 185236931 -14393219 + MER113 DNA MER1_type? 72 116 -405 1389 132 9 27 chr5 185237257 185237477 -14392673 + AluJb SINE Alu 85 300 -12 978 228 125 33 chr5 185237714 185238236 -14391914 - L1MC5 LINE L1 -51 7910 7437 1261 144 88 30 chr5 185238236 185238455 -14391695 + MER33 DNA MER1_type 1 206 -2379 219 69 0 0 chr5 185238455 185238484 -14391666 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1812 166 0 7 chr5 185238487 185238771 -14391379 - AluJb SINE Alu -30 282 1 1261 144 88 30 chr5 185238771 185238852 -14391298 + MER33 DNA MER1_type 207 323 -1 978 228 125 33 chr5 185238852 185238899 -14391251 - L1MC5 LINE L1 -524 7437 7289 865 197 57 21 chr5 185239087 185239280 -14390870 - MER20 DNA MER1_type -4 215 16 193 325 175 0 chr5 185239485 185239565 -14390585 + L2 LINE L2 3136 3229 -43 248 342 106 53 chr5 185239772 185240332 -14389818 - L2 LINE L2 0 3313 2712 4678 175 42 12 chr5 185240340 185241660 -14388490 - L1MB7 LINE L1 0 6682 5081 1955 159 7 0 chr5 185241660 185241969 -14388181 + AluJb SINE Alu 1 311 -1 4678 175 42 12 chr5 185241969 185242303 -14387847 - L1MB7 LINE L1 -1601 5081 4758 5877 237 57 38 chr5 185242312 185242378 -14387772 - L1MB7 LINE L1 -2063 4581 4518 1690 169 59 0 chr5 185242378 185242651 -14387499 + AluJb SINE Alu 1 289 -23 5877 237 57 38 chr5 185242651 185243694 -14386456 - L1MB7 LINE L1 -2126 4518 3496 2068 119 3 35 chr5 185243694 185244005 -14386145 - AluSx SINE Alu -11 301 1 5877 237 57 38 chr5 185244005 185246893 -14383257 - L1MB7 LINE L1 -3148 3496 375 626 184 22 9 chr5 185246899 185247055 -14383095 - L1ME1 LINE L1 0 6334 6021 831 31 0 0 chr5 185247059 185247155 -14382995 + AluY SINE Alu 209 304 -7 326 258 89 8 chr5 185247155 185247279 -14382871 - L1ME1 LINE L1 -141 6025 5892 375 333 20 7 chr5 185247290 185247440 -14382710 - L2 LINE L2 -606 2708 2557 282 287 0 35 chr5 185248899 185248986 -14381164 + L2 LINE L2 3225 3308 -5 1921 217 47 7 chr5 185249027 185249474 -14380676 - MLT1C LTR MaLR -2 465 1 237 83 0 0 chr5 185249748 185249784 -14380366 + (A)n Simple_repeat Simple_repeat 1 36 0 1179 196 100 108 chr5 185250710 185251295 -14378855 + L1MC5 LINE L1 6776 7355 -606 2138 119 3 13 chr5 185251295 185251606 -14378544 + AluSx SINE Alu 1 308 -4 1179 196 100 108 chr5 185251606 185251748 -14378402 + L1MC5 LINE L1 7355 7497 -464 331 270 151 5 chr5 185251766 185251951 -14378199 + MLT1H LTR MaLR 23 234 -315 503 190 0 43 chr5 185252097 185252213 -14377937 + MLT1A1 LTR MaLR 35 145 -220 1082 192 10 5 chr5 185252278 185252481 -14377669 + MLT1A1 LTR MaLR 162 365 0 1237 243 124 16 chr5 185253347 185253819 -14376331 + MLT1G1 LTR MaLR 1 474 -56 1789 148 16 39 chr5 185254098 185254408 -14375742 + AluJo SINE Alu 1 303 -9 2210 132 0 3 chr5 185254412 185254716 -14375434 + AluSx SINE Alu 1 303 -9 276 305 97 7 chr5 185255340 185255494 -14374656 - L1ME1 LINE L1 -320 5801 5634 539 281 86 0 chr5 185255543 185255682 -14374468 - MIR SINE MIR -111 151 1 612 234 69 40 chr5 185255899 185256291 -14373859 - MLT1J1 LTR MaLR 0 446 1 878 233 49 9 chr5 185256313 185256536 -14373614 - MIR SINE MIR -3 259 28 281 277 43 0 chr5 185257036 185257130 -14373020 + GA-rich Low_complexity Low_complexity 1 98 0 224 298 30 53 chr5 185257872 185258003 -14372147 - MIR SINE MIR -57 205 78 243 265 79 62 chr5 185258471 185258654 -14371496 - MIR3 SINE MIR -65 143 2 1664 152 87 4 chr5 185258877 185259153 -14370997 + AluJb SINE Alu 1 299 -13 314 225 92 58 chr5 185259192 185259312 -14370838 - MIR SINE MIR -65 197 74 234 266 94 70 chr5 185259391 185259519 -14370631 + MIR SINE MIR 56 186 -76 373 315 27 40 chr5 185259550 185259772 -14370378 - MIR SINE MIR -36 226 8 2299 127 35 42 chr5 185259970 185260394 -14369756 + MSTB LTR MaLR 1 421 -5 231 103 0 0 chr5 185260608 185260647 -14369503 + (CA)n Simple_repeat Simple_repeat 2 40 0 359 279 50 39 chr5 185261339 185261518 -14368632 + MLT1K LTR MaLR 122 302 -286 228 278 0 0 chr5 185262206 185262260 -14367890 + (TG)n Simple_repeat Simple_repeat 1 54 0 395 207 117 32 chr5 185262406 185262619 -14367531 - MLT1D LTR MaLR -186 319 15 247 200 88 50 chr5 185262620 185262700 -14367450 + MLT1E2 LTR MaLR 27 109 -517 1671 169 0 37 chr5 185262931 185263266 -14366884 + AluJo SINE Alu 1 324 0 455 233 43 26 chr5 185264215 185264331 -14365819 - MIR3 SINE MIR -25 183 66 189 409 0 0 chr5 185264579 185264667 -14365483 - L3 LINE CR1 -19 1558 1471 301 273 25 56 chr5 185264671 185264832 -14365318 - L1MA10 LINE L1 0 6334 6179 7805 166 7 30 chr5 185264853 185267546 -14362604 - L1PB1 LINE L1 -1 6150 3522 13526 165 87 39 chr5 185267646 185269317 -14360833 - L1PBa LINE L1 -924 5938 4348 2079 156 3 0 chr5 185269317 185269618 -14360532 - AluSx SINE Alu -10 302 1 13526 165 87 39 chr5 185269618 185273698 -14356452 - L1PBa LINE L1 -2514 4348 1 4203 237 54 31 chr5 185273694 185275813 -14354337 - L1ME1 LINE L1 -121 6114 4045 * 2047 128 24 0 chr5 185275813 185276101 -14354049 - AluSx SINE Alu -17 295 1 4203 237 54 31 chr5 185276101 185276826 -14353324 - L1ME1 LINE L1 -2190 4045 3338 2774 7 0 0 chr5 185276826 185277125 -14353025 + AluYa5 SINE Alu 5 303 -8 4203 237 54 31 chr5 185277125 185278255 -14351895 - L1ME1 LINE L1 -2897 3338 650 * 16776 155 56 33 chr5 185278253 185280694 -14349456 + L1MA2 LINE L1 16 2706 -4859 776 179 8 15 chr5 185280694 185280828 -14349322 + FLAM_C SINE Alu 1 133 0 16776 155 56 33 chr5 185280828 185281886 -14348264 + L1MA2 LINE L1 2706 3739 -3826 9628 138 9 50 chr5 185281873 185283724 -14346426 + L1MA2 LINE L1 4673 6599 -1124 * 2119 118 10 23 chr5 185283724 185284030 -14346120 + AluSx SINE Alu 1 302 -10 9628 138 9 50 chr5 185284030 185284234 -14345916 + L1MA2 LINE L1 6599 6810 -913 2146 99 27 3 chr5 185284234 185284527 -14345623 + AluSq SINE Alu 13 312 -1 9628 138 9 50 chr5 185284527 185285607 -14344543 + L1MA2 LINE L1 6810 7669 -54 246 62 0 0 chr5 185285608 185285640 -14344510 + (A)n Simple_repeat Simple_repeat 1 32 0 1038 246 86 68 chr5 185285647 185286253 -14343897 - L1ME1 LINE L1 -5724 672 56 278 363 127 0 chr5 185286294 185286553 -14343597 + L2 LINE L2 2061 2352 -962 771 284 40 48 chr5 185287938 185288219 -14341931 + L1MC4a LINE L1 5422 5640 -481 2381 71 7 0 chr5 185288219 185288516 -14341634 - AluY SINE Alu -12 299 1 771 284 40 48 chr5 185288516 185288695 -14341455 + L1MC4a LINE L1 5640 5819 -302 201 274 59 0 chr5 185288997 185289048 -14341102 - MER5B DNA MER1_type 0 178 125 371 232 134 9 chr5 185289712 185289824 -14340326 + MER5B DNA MER1_type 53 178 0 382 254 26 0 chr5 185290562 185290676 -14339474 + MIR3 SINE MIR 85 201 -7 738 164 0 0 chr5 185291106 185291222 -14338928 - FLAM_C SINE Alu -27 116 1 21 57 0 0 chr5 185291411 185291446 -14338704 + AT_rich Low_complexity Low_complexity 1 35 0 212 371 95 0 chr5 185291446 185291551 -14338599 + L2 LINE L2 3147 3261 -11 2719 124 16 23 chr5 185291757 185292200 -14337950 - L1PA15 LINE L1 -9 6156 5717 506 326 46 5 chr5 185292926 185293122 -14337028 - MIR SINE MIR -58 204 1 1689 165 4 18 chr5 185293168 185293440 -14336710 - AluJb SINE Alu -30 282 15 422 221 62 72 chr5 185293639 185293834 -14336316 - MLT1L LTR MaLR -5 610 418 338 267 59 10 chr5 185293860 185293961 -14336189 - MIR SINE MIR -4 258 153 1916 146 53 21 chr5 185294879 185295257 -14334893 + MLT1B LTR MaLR 1 390 0 842 310 14 5 chr5 185297041 185297257 -14332893 + MIR SINE MIR 32 249 -13 190 226 94 0 chr5 185297477 185297530 -14332620 + L3 LINE CR1 259 316 -1261 186 43 0 0 chr5 185298603 185298626 -14331524 + (TTG)n Simple_repeat Simple_repeat 2 24 0 858 294 70 36 chr5 185298647 185299031 -14331119 - LTR16A LTR ERVL -27 423 27 8166 25 3 0 chr5 185299914 185301345 -14328805 - L1PA4 LINE L1 0 6155 4723 12562 28 0 16 chr5 185301345 185302854 -14327296 + L1PA4 LINE L1 3234 4718 -1428 396 257 35 35 chr5 185303360 185303531 -14326619 + L1ME LINE L1 5635 5805 -316 253 240 67 0 chr5 185303567 185303642 -14326508 - MER116 DNA Mariner 0 80 1 391 319 22 21 chr5 185303902 185304052 -14326098 - MIR SINE MIR -69 139 5 253 293 112 17 chr5 185304443 185304559 -14325591 + MIR SINE MIR 20 146 -62 305 344 91 13 chr5 185305643 185305873 -14324277 + MIR SINE MIR 7 254 -8 257 341 0 12 chr5 185305888 185305970 -14324180 + L2 LINE L2 3148 3228 -44 204 133 50 0 chr5 185306240 185306300 -14323850 + (ATTTG)n Simple_repeat Simple_repeat 1 63 0 245 350 60 10 chr5 185307006 185307106 -14323044 - MIR SINE MIR -88 120 16 2252 90 0 3 chr5 185307313 185307602 -14322548 - AluY SINE Alu -11 300 13 1705 171 151 34 chr5 185307618 185308034 -14322116 - MLT1C LTR MaLR -2 465 1 367 246 91 35 chr5 185308044 185308243 -14321907 + MER113 DNA MER1_type? 1 210 -311 371 258 39 26 chr5 185308838 185308993 -14321157 - MER117 DNA MER1_type -39 158 2 30 0 0 0 chr5 185309281 185309311 -14320839 + AT_rich Low_complexity Low_complexity 1 30 0 9540 74 14 19 chr5 185309314 185311340 -14318810 - L1PA7 LINE L1 -7 6147 4127 239 67 0 0 chr5 185311347 185311377 -14318773 + L1P LINE L1 2530 2559 -3587 702 229 6 0 chr5 185311721 185311878 -14318272 - MIR SINE MIR -1 261 104 1123 198 9 18 chr5 185312190 185312412 -14317738 + MER63C DNA MER1_type 253 472 -458 467 195 195 0 chr5 185312450 185312537 -14317613 - AluSc SINE Alu -73 236 133 2055 112 0 7 chr5 185312537 185312859 -14317291 - AluSx SINE Alu 0 320 1 317 80 20 0 chr5 185312859 185312909 -14317241 + MER63C DNA MER1_type 461 511 -419 557 265 48 0 chr5 185313018 185313184 -14316966 + MER63C DNA MER1_type 756 929 -1 404 306 5 38 chr5 185313276 185313462 -14316688 + L1ME3A LINE L1 5692 5871 -299 685 245 86 0 chr5 185313463 185313614 -14316536 + FRAM SINE Alu 1 164 -2 4811 135 59 8 chr5 185313821 185314568 -14315582 + LTR1 LTR ERV1 1 785 0 35 71 0 0 chr5 185314726 185314796 -14315354 + AT_rich Low_complexity Low_complexity 1 70 0 554 308 11 11 chr5 185315908 185316090 -14314060 - MIR SINE MIR -33 229 48 940 125 0 0 chr5 185316198 185316334 -14313816 + L1PA15 LINE L1 6024 6159 -6 1888 167 87 106 chr5 185316477 185316551 -14313599 - MLT2B1 LTR ERVL -2 518 444 204 97 0 0 chr5 185316551 185316582 -14313568 + (TG)n Simple_repeat Simple_repeat 2 32 0 1888 167 87 106 chr5 185316582 185317035 -14313115 - MLT2B1 LTR ERVL -76 444 1 22 80 0 0 chr5 185317166 185317216 -14312934 + AT_rich Low_complexity Low_complexity 1 50 0 353 242 110 0 chr5 185317278 185317369 -14312781 + L1ME LINE L1 5466 5566 -604 2111 192 70 36 chr5 185317369 185317433 -14312717 + MSTB2 LTR MaLR 1 61 -396 2922 79 6 0 chr5 185317433 185317786 -14312364 - THE1A LTR MaLR 0 355 1 12809 89 1 6 chr5 185317786 185319373 -14310777 - THE1A-int LTR MaLR 0 1580 1 2348 89 98 9 chr5 185319373 185319699 -14310451 - THE1A LTR MaLR 0 355 1 2111 192 70 36 chr5 185319699 185320074 -14310076 + MSTB2 LTR MaLR 60 457 0 458 289 31 25 chr5 185320076 185320235 -14309915 + L1ME LINE L1 5564 5723 -447 208 370 43 0 chr5 185321110 185321202 -14308948 - MIR SINE MIR -121 141 46 207 139 28 0 chr5 185321708 185321744 -14308406 - L2 LINE L2 -513 2801 2765 246 299 36 98 chr5 185323029 185323155 -14306995 - MIR SINE MIR -14 248 137 1506 158 103 4 chr5 185323155 185323427 -14306723 + AluJo SINE Alu 5 303 -9 246 299 36 98 chr5 185323427 185323494 -14306656 - MIR SINE MIR -125 137 67 542 259 175 0 chr5 185323735 185323986 -14306164 - LTR50 LTR ERVL -483 312 18 1465 224 84 39 chr5 185323999 185324440 -14305710 - MLT1C LTR MaLR -1 466 6 1171 93 29 52 chr5 185324602 185324774 -14305376 + L1PA11 LINE L1 6001 6168 -6 396 59 0 0 chr5 185324877 185324928 -14305222 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 697 176 38 124 chr5 185325255 185325364 -14304786 + MIR SINE MIR 41 158 -104 2160 119 0 3 chr5 185325364 185325659 -14304491 - AluSg SINE Alu -16 294 1 697 176 38 124 chr5 185325659 185325707 -14304443 + MIR SINE MIR 158 178 -84 2002 157 0 0 chr5 185325707 185326007 -14304143 + AluSx SINE Alu 1 300 -12 697 176 38 124 chr5 185326007 185326058 -14304092 + MIR SINE MIR 178 232 -30 318 309 65 25 chr5 185326517 185326718 -14303432 + MLT1K LTR MaLR 367 575 -13 965 340 70 34 chr5 185328767 185329323 -14300827 + MLT1K LTR MaLR 1 576 -12 915 264 21 12 chr5 185329430 185329672 -14300478 - MIR SINE MIR -17 245 2 2031 183 25 6 chr5 185329933 185330288 -14299862 - MLT1A1 LTR MaLR 0 365 4 2038 158 15 66 chr5 185330497 185330907 -14299243 + MLT1B LTR MaLR 1 389 -1 494 271 113 23 chr5 185331128 185331305 -14298845 + MIR SINE MIR 57 249 -13 1766 165 3 18 chr5 185332008 185332317 -14297833 - AluJb SINE Alu 0 305 1 2387 136 40 81 chr5 185333186 185333658 -14296492 + Tigger1 DNA MER2_type 1 453 -1965 2170 115 3 21 chr5 185333685 185334015 -14296135 + Tigger1 DNA MER2_type 935 1258 -1160 788 224 0 0 chr5 185334015 185334149 -14296001 - FLAM_A SINE Alu -8 134 1 7586 107 38 15 chr5 185334150 185334384 -14295766 + Tigger1 DNA MER2_type 1249 1476 -942 2205 133 0 0 chr5 185334384 185334686 -14295464 + AluSg SINE Alu 1 302 -8 7586 107 38 15 chr5 185334686 185335590 -14294560 + Tigger1 DNA MER2_type 1476 2413 -5 892 237 32 44 chr5 185335994 185336243 -14293907 + MER102a DNA MER1_type 84 329 -1 1997 103 0 0 chr5 185337024 185337287 -14292863 - AluY SINE Alu -10 301 39 970 264 55 55 chr5 185337663 185338121 -14292029 - MLT1K LTR MaLR -5 583 126 411 341 85 26 chr5 185338249 185338519 -14291631 + L2 LINE L2 2983 3268 -4 209 297 0 16 chr5 185338838 185338902 -14291248 + L2 LINE L2 3210 3272 0 246 67 0 0 chr5 185339240 185339270 -14290880 + tRNA-His-CAC tRNA tRNA 7 36 -39 1055 304 61 12 chr5 185339406 185339830 -14290320 + LTR16B LTR ERVL 5 449 -15 306 196 149 48 chr5 185341521 185341689 -14288461 - MLT1F LTR MaLR -11 531 347 662 198 77 39 chr5 185341838 185342020 -14288130 + MIR SINE MIR 2 190 -72 233 286 51 31 chr5 185342386 185342484 -14287666 + MIR3 SINE MIR 89 188 -20 321 321 57 43 chr5 185342518 185342727 -14287423 + L2 LINE L2 2550 2761 -553 489 289 20 59 chr5 185342979 185343183 -14286967 + LTR33 LTR ERVL 326 521 0 2831 127 26 16 chr5 185343244 185343568 -14286582 + MSTC LTR MaLR 1 331 -97 2249 83 3 3 chr5 185343568 185343857 -14286293 + AluY SINE Alu 8 296 -15 2831 127 26 16 chr5 185343857 185343956 -14286194 + MSTC LTR MaLR 331 428 0 2314 94 7 7 chr5 185344079 185344386 -14285764 - AluSc SINE Alu -2 307 1 354 328 74 81 chr5 185344401 185344724 -14285426 + L2 LINE L2 2937 3257 -15 573 298 41 29 chr5 185346269 185346511 -14283639 + MIR SINE MIR 12 256 -6 882 48 27 20 chr5 185346529 185346676 -14283474 + (TTTC)n Simple_repeat Simple_repeat 4 151 0 757 293 109 33 chr5 185348249 185348711 -14281439 + L1ME3 LINE L1 5270 5783 -379 2189 123 0 0 chr5 185348711 185349011 -14281139 + AluSx SINE Alu 1 300 -12 757 293 109 33 chr5 185349011 185349183 -14280967 + L1ME3 LINE L1 5783 5940 -222 527 294 73 48 chr5 185349406 185349695 -14280455 + L1MEd LINE L1 504 799 -5320 228 178 22 0 chr5 185350347 185350392 -14279758 + MLT1J1 LTR MaLR 346 391 -55 1793 132 75 0 chr5 185350466 185350746 -14279404 + AluSx SINE Alu 1 301 -11 270 262 56 0 chr5 185350746 185350872 -14279278 + L1MEd LINE L1 686 818 -5301 1076 267 62 3 chr5 185350997 185351565 -14278585 + L1ME3A LINE L1 4812 5419 -743 1246 246 55 6 chr5 185351565 185351927 -14278223 + MLT1D LTR MaLR 118 497 -8 1875 213 78 4 chr5 185351933 185352444 -14277706 + L1ME3A LINE L1 5616 6164 -6 491 263 71 32 chr5 185352450 185352731 -14277419 + L1MEd LINE L1 945 1236 -4883 2593 231 36 16 chr5 185352867 185353610 -14276540 - L1ME1 LINE L1 -9 6157 5392 1988 124 7 10 chr5 185353610 185353908 -14276242 - AluSq SINE Alu -8 305 9 2593 231 36 16 chr5 185353908 185354007 -14276143 - L1ME1 LINE L1 -774 5392 5296 5235 186 57 13 chr5 185354210 185356180 -14273970 - L1PA13 LINE L1 -35 6128 4071 727 305 66 9 chr5 185356275 185356501 -14273649 - MIR SINE MIR -6 256 18 1108 257 375 17 chr5 185357042 185357880 -14272270 - L2 LINE L2 -860 2454 1317 2121 103 7 14 chr5 185360839 185361129 -14269021 - AluSx SINE Alu -7 305 18 410 270 18 84 chr5 185361157 185361383 -14268767 - LTR33A LTR ERVL -5 518 308 502 298 12 6 chr5 185361663 185361831 -14268319 - LTR33 LTR ERVL -343 178 10 490 276 50 11 chr5 185365764 185365945 -14264205 + L1ME LINE L1 5604 5791 -330 836 285 33 12 chr5 185365950 185366192 -14263958 + MIR SINE MIR 8 254 -8 820 103 0 0 chr5 185366243 185366350 -14263800 + U6 snRNA snRNA 1 107 0 6263 104 51 10 chr5 185366350 185368056 -14262094 + L1PA11 LINE L1 4429 6174 0 205 288 14 0 chr5 185368351 185368424 -14261726 + (TA)n Simple_repeat Simple_repeat 1 74 0 189 0 0 0 chr5 185368437 185368458 -14261692 + (TA)n Simple_repeat Simple_repeat 2 22 0 273 286 11 11 chr5 185368620 185368711 -14261439 - MER96 DNA MER1_type? 0 175 85 23 54 0 0 chr5 185369751 185369788 -14260362 + AT_rich Low_complexity Low_complexity 1 37 0 1652 233 70 38 chr5 185370111 185370328 -14259822 + MLT1E LTR MaLR 1 210 -383 2303 175 26 7 chr5 185370328 185370746 -14259404 + MSTB LTR MaLR 1 426 0 1652 233 70 38 chr5 185370746 185371096 -14259054 + MLT1E LTR MaLR 210 591 -2 320 234 15 80 chr5 185371425 185371562 -14258588 + LTR16A LTR ERVL 321 448 -2 378 0 0 0 chr5 185371612 185371654 -14258496 + (CA)n Simple_repeat Simple_repeat 2 43 0 249 351 71 0 chr5 185371667 185371975 -14258175 - L1MEc LINE L1 -4612 1784 1455 21 57 0 0 chr5 185372054 185372089 -14258061 + AT_rich Low_complexity Low_complexity 1 35 0 345 319 63 44 chr5 185372113 185372383 -14257767 - L1MEc LINE L1 -4216 2180 1906 21 57 0 0 chr5 185372585 185372620 -14257530 + AT_rich Low_complexity Low_complexity 1 35 0 359 326 75 32 chr5 185372635 185372914 -14257236 - L1MEc LINE L1 -4200 2196 1906 294 226 22 58 chr5 185372929 185373066 -14257084 - L1M4 LINE L1 -816 5330 5199 1263 194 28 108 chr5 185373077 185373542 -14256608 - L1ME1 LINE L1 -5 6161 5734 478 203 261 0 chr5 185373539 185373692 -14256458 - L1ME1 LINE L1 -657 5505 5313 * 303 183 14 0 chr5 185373696 185373767 -14256383 - L1ME1 LINE L1 -877 5269 5198 261 146 0 0 chr5 185373776 185373824 -14256326 + (TTTTC)n Simple_repeat Simple_repeat 5 52 0 403 298 78 10 chr5 185374681 185374990 -14255160 + L1MC4 LINE L1 7690 8019 -23 394 284 124 43 chr5 185377021 185377303 -14252847 - L2 LINE L2 -1 3312 3008 299 270 103 30 chr5 185378148 185378398 -14251752 - MLT1L LTR MaLR 0 595 344 656 284 113 0 chr5 185379176 185379398 -14250752 + MIR SINE MIR 8 254 -8 279 349 52 0 chr5 185379402 185379634 -14250516 - L1ME LINE L1 -322 5799 5556 2226 94 0 7 chr5 185379811 185380098 -14250052 - AluSq SINE Alu -28 285 1 234 315 56 49 chr5 185380583 185380745 -14249405 + MER5A DNA MER1_type 21 183 -6 553 251 133 9 chr5 185380819 185381030 -14249120 - L2 LINE L2 -15 3298 3062 194 217 0 17 chr5 185381810 185381870 -14248280 + CT-rich Low_complexity Low_complexity 3 61 0 196 138 0 52 chr5 185381990 185382048 -14248102 + (TTC)n Simple_repeat Simple_repeat 1 55 0 1755 145 13 48 chr5 185382054 185382364 -14247786 - AluJo SINE Alu -11 301 3 333 0 0 0 chr5 185382426 185382463 -14247687 + (TC)n Simple_repeat Simple_repeat 1 37 0 234 0 0 0 chr5 185382462 185382488 -14247662 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 294 29 0 0 chr5 185382509 185382544 -14247606 + (TG)n Simple_repeat Simple_repeat 2 36 0 228 327 159 9 chr5 185382896 185383009 -14247141 - MLT1H LTR MaLR 0 549 420 592 235 75 5 chr5 185383022 185383209 -14246941 - MLT1H LTR MaLR -349 200 1 511 250 35 10 chr5 185383211 185383411 -14246739 + L1MC5 LINE L1 7720 7924 -37 479 285 140 10 chr5 185383541 185383748 -14246402 - MIR SINE MIR 0 262 29 279 54 0 0 chr5 185384698 185384735 -14245415 + (TG)n Simple_repeat Simple_repeat 1 37 0 209 196 18 0 chr5 185385144 185385200 -14244950 + GA-rich Low_complexity Low_complexity 2 58 0 427 291 43 50 chr5 185386330 185386378 -14243772 + MIR3 SINE MIR 59 106 -102 2238 128 0 0 chr5 185386378 185386684 -14243466 + AluSx SINE Alu 1 306 -6 427 291 43 50 chr5 185386684 185386776 -14243374 + MIR3 SINE MIR 106 198 -10 474 18 0 0 chr5 185387391 185387446 -14242704 + (TG)n Simple_repeat Simple_repeat 2 56 0 720 151 87 0 chr5 185389179 185389351 -14240799 + MER53 DNA DNA 3 189 0 304 262 215 20 chr5 185389523 185389672 -14240478 + MER5B DNA MER1_type 1 178 0 578 291 12 0 chr5 185389735 185389907 -14240243 - MER5B DNA MER1_type -4 174 1 360 322 154 39 chr5 185391682 185391915 -14238235 - L2 LINE L2 -1 3271 3012 499 293 24 37 chr5 185391991 185392155 -14237995 - MIR SINE MIR -96 166 5 592 311 135 27 chr5 185392512 185392808 -14237342 + L2 LINE L2 1759 2086 -1228 2230 127 0 0 chr5 185393651 185393958 -14236192 + AluSx SINE Alu 1 307 -5 259 236 45 22 chr5 185394020 185394109 -14236041 - MLT1K LTR MaLR -87 501 411 1161 162 117 104 chr5 185394183 185394581 -14235569 - MLT1A2 LTR MaLR 0 374 1 283 266 38 0 chr5 185394604 185394683 -14235467 - MLT1K LTR MaLR -317 271 190 201 278 0 0 chr5 185395454 185395508 -14234642 + L2 LINE L2 3168 3221 -92 185 283 133 0 chr5 185395629 185395689 -14234461 - L3 LINE CR1 -130 1447 1380 209 274 170 9 chr5 185396066 185396172 -14233978 + L2 LINE L2 2925 3047 -225 999 282 129 59 chr5 185396756 185397246 -14232904 - L2 LINE L2 -1228 2086 1563 266 236 313 14 chr5 185397383 185397527 -14232623 + MIR SINE MIR 20 206 -56 215 108 15 92 chr5 185397663 185397728 -14232422 + (CAAAAA)n Simple_repeat Simple_repeat 2 61 0 762 210 99 12 chr5 185398366 185398609 -14231541 + MER33 DNA MER1_type 61 324 0 681 258 68 11 chr5 185398618 185398808 -14231342 - MIR SINE MIR -32 230 30 474 241 91 37 chr5 185398864 185399051 -14231099 + MIR SINE MIR 13 209 -53 1422 47 0 0 chr5 185399051 185399221 -14230929 + AluYb8 SINE Alu 136 305 -13 370 314 79 63 chr5 185399304 185399619 -14230531 + L2 LINE L2 2989 3308 -5 3493 241 222 4 chr5 185399908 185401132 -14229018 + L2 LINE L2 1321 2796 -518 503 281 79 35 chr5 185401270 185401498 -14228652 + L2 LINE L2 3074 3311 -2 183 80 0 0 chr5 185401917 185401942 -14228208 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1028 193 152 12 chr5 185401947 185402191 -14227959 - AluJo SINE Alu -31 281 4 21 36 0 0 chr5 185404164 185404192 -14225958 + AT_rich Low_complexity Low_complexity 1 28 0 396 343 23 12 chr5 185404418 185404590 -14225560 - MIR SINE MIR -77 185 12 252 212 121 10 chr5 185404815 185404914 -14225236 + MER113 DNA MER1_type? 4 113 -408 2345 90 3 6 chr5 185404951 185405262 -14224888 - AluSg SINE Alu 0 310 1 198 0 0 0 chr5 185405553 185405575 -14224575 + (T)n Simple_repeat Simple_repeat 1 22 0 548 310 134 8 chr5 185405623 185405862 -14224288 + L2 LINE L2 2429 2697 -617 430 228 60 34 chr5 185407312 185407461 -14222689 - MLT1J LTR MaLR -33 478 326 * 616 239 8 8 chr5 185407447 185407581 -14222569 - MLT1J LTR MaLR -334 177 44 843 145 21 41 chr5 185407587 185407732 -14222418 + BC200 scRNA scRNA 2 143 -57 236 331 52 37 chr5 185408162 185408298 -14221852 - L2 LINE L2 -2721 593 456 373 236 91 9 chr5 185408448 185408558 -14221592 - L2 LINE L2 -684 2630 2512 482 218 82 48 chr5 185408597 185408744 -14221406 - MIR SINE MIR -71 191 40 1827 109 0 31 chr5 185409392 185409685 -14220465 + AluSc SINE Alu 1 284 -25 1737 124 0 26 chr5 185410652 185410917 -14219233 + AluJb SINE Alu 33 290 -22 21 0 0 0 chr5 185410974 185410995 -14219155 + AT_rich Low_complexity Low_complexity 1 21 0 2168 157 0 27 chr5 185411016 185411392 -14218758 + MER47A DNA MER2_type 1 366 0 374 53 18 0 chr5 185411393 185411450 -14218700 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 1146 218 86 62 chr5 185411530 185411915 -14218235 - MLT2C2 LTR ERVL -6 458 65 881 182 89 21 chr5 185411915 185412195 -14217955 + L1M4 LINE L1 2618 2916 -3230 2180 198 14 50 chr5 185412319 185412876 -14217274 + L1M4 LINE L1 4677 5213 -933 * 3192 171 61 27 chr5 185412873 185413498 -14216652 + L1 LINE L1 12 657 -6908 347 208 13 0 chr5 185413503 185413580 -14216570 + LTR55 LTR ERV 82 159 -389 1028 140 37 61 chr5 185413580 185413754 -14216396 + L1 LINE L1 5182 5352 -2213 2513 55 10 29 chr5 185413754 185414065 -14216085 + AluSp SINE Alu 1 305 -8 1028 140 37 61 chr5 185414065 185414104 -14216046 + L1 LINE L1 5352 5390 -2175 3383 194 59 19 chr5 185414110 185414954 -14215196 + L1MCb LINE L1 825 1699 -4849 5040 198 21 19 chr5 185414958 185416077 -14214073 - L1 LINE L1 -1459 4687 3567 1688 87 20 24 chr5 185416196 185416449 -14213701 + L1PB1 LINE L1 5900 6151 0 2848 186 105 35 chr5 185416451 185416927 -14213223 + L1MCb LINE L1 1687 2128 -4436 2522 73 0 6 chr5 185416927 185417240 -14212910 + AluY SINE Alu 1 311 0 2848 186 105 35 chr5 185417240 185417602 -14212548 + L1MCb LINE L1 2128 2617 -3947 * 5478 241 31 17 chr5 185417596 185417810 -14212340 + L1MCb LINE L1 2885 3095 -3469 2020 156 52 27 chr5 185417810 185418176 -14211974 + THE1C LTR MaLR 1 375 0 5478 241 31 17 chr5 185418176 185419526 -14210624 + L1MCb LINE L1 3095 4470 -2094 1824 73 0 0 chr5 185419537 185419771 -14210379 + L1P5 LINE L1 5558 5791 -360 1140 226 45 97 chr5 185420012 185420547 -14209603 + L1MCb LINE L1 4446 4952 -1612 7578 65 148 11 chr5 185420548 185421623 -14208527 + MER11B LTR ERVK 1 1222 -14 2014 221 19 36 chr5 185421661 185422185 -14207965 + L1MCb LINE L1 4946 5460 -1104 309 221 15 0 chr5 185422185 185422253 -14207897 - LTR69 LTR ERVL -518 70 2 6434 73 0 8 chr5 185422368 185423189 -14206961 + L1P LINE L1 7 820 -5326 * 19466 35 1 1 chr5 185423181 185425503 -14204647 + L1P LINE L1 1973 4294 -1852 14406 110 8 3 chr5 185425507 185427642 -14202508 - L1P LINE L1 -1017 5129 2983 5441 116 29 30 chr5 185427646 185428183 -14201967 + Tigger1 DNA MER2_type 1553 2090 -328 1707 188 0 31 chr5 185428183 185428320 -14201830 + AluJb SINE Alu 1 141 -171 2274 110 3 13 chr5 185428320 185428630 -14201520 + AluSp SINE Alu 1 307 -6 1707 188 0 31 chr5 185428630 185428812 -14201338 + AluJb SINE Alu 141 310 -2 5441 116 29 30 chr5 185428812 185429140 -14201010 + Tigger1 DNA MER2_type 2090 2417 -1 389 272 11 0 chr5 185429142 185429234 -14200916 + MLT1J2 LTR MaLR 71 163 -287 * 410 262 209 67 chr5 185429229 185429454 -14200696 + MLT1J LTR MaLR 218 474 -37 456 306 177 0 chr5 185429499 185429708 -14200442 + L2 LINE L2 2506 2751 -563 2277 181 96 37 chr5 185429710 185430223 -14199927 - MER90 LTR ERV1 0 614 72 399 352 60 19 chr5 185430237 185430453 -14199697 + L2 LINE L2 2751 2975 -339 4679 65 2 0 chr5 185430477 185431043 -14199107 - L1PA8 LINE L1 -14 6158 5592 792 62 0 0 chr5 185431043 185431140 -14199010 + L1PA8 LINE L1 5503 5599 -573 243 371 97 16 chr5 185431258 185431382 -14198768 + L2 LINE L2 3137 3270 -2 278 302 19 38 chr5 185431748 185431854 -14198296 - MER102a DNA MER1_type -4 326 223 998 272 118 10 chr5 185431857 185432254 -14197896 - Charlie8 DNA MER1_type -1940 477 38 395 129 8 97 chr5 185432925 185432936 -14197214 + L1PB1 LINE L1 5782 5792 -362 2037 89 33 0 chr5 185432936 185433207 -14196943 - L1PB1 LINE L1 -4 6147 5868 395 129 8 97 chr5 185433207 185433284 -14196866 + L1PB1 LINE L1 5792 5869 -285 452 264 6 69 chr5 185434534 185434693 -14195457 + MIR SINE MIR 102 250 -12 218 257 0 43 chr5 185434691 185434761 -14195389 - MIR SINE MIR -140 122 56 * 5895 219 54 17 chr5 185435633 185436122 -14194028 + Cheshire DNA MER1_type 1 470 -1950 2318 139 29 73 chr5 185436122 185436531 -14193619 + MSTD LTR MaLR 3 393 -3 5895 219 54 17 chr5 185436531 185437398 -14192752 + Cheshire DNA MER1_type 470 1407 -1013 1089 185 85 33 chr5 185437370 185437700 -14192450 + Cheshire DNA MER1_type 2073 2419 -1 * 1166 186 130 47 chr5 185437728 185438050 -14192100 + MLT2C1 LTR ERVL 1 349 -48 227 279 47 0 chr5 185438050 185438136 -14192014 + L1MC4 LINE L1 6607 6696 -1346 225 245 0 43 chr5 185438065 185438159 -14191991 - L1MC4 LINE L1 -1339 6703 6614 * 348 265 41 0 chr5 185438165 185438263 -14191887 + L1MC4 LINE L1 6614 6715 -1327 2196 91 3 23 chr5 185438768 185439075 -14191075 + AluSp SINE Alu 1 301 -12 486 232 232 0 chr5 185439134 185439276 -14190874 - MIR SINE MIR -65 197 23 182 292 134 41 chr5 185440462 185440633 -14189517 - MER5A DNA MER1_type -2 187 1 427 269 34 8 chr5 185440846 185440965 -14189185 + MIR SINE MIR 120 241 -21 180 271 85 0 chr5 185441119 185441178 -14188972 - MIR SINE MIR -80 182 119 201 293 172 37 chr5 185441254 185441469 -14188681 - L2 LINE L2 -341 2973 2730 1701 231 75 26 chr5 185441728 185442192 -14187958 - MLT1J LTR MaLR -1 510 24 1623 191 36 54 chr5 185442196 185442583 -14187567 - MLT1B LTR MaLR 0 390 11 893 247 160 30 chr5 185442738 185443232 -14186918 - MER34B LTR ERV1 0 565 8 1747 180 35 23 chr5 185443303 185443648 -14186502 - MLT1C LTR MaLR -118 349 1 213 238 0 0 chr5 185444541 185444583 -14185567 + (TTCA)n Simple_repeat Simple_repeat 2 43 0 413 311 60 38 chr5 185444583 185444766 -14185384 - L2 LINE L2 -1 3312 3126 2213 118 6 62 chr5 185445689 185446046 -14184104 - MER1B DNA MER1_type 0 337 1 1471 301 59 19 chr5 185446339 185446878 -14183272 - L2 LINE L2 -338 2976 2416 6793 80 9 28 chr5 185446973 185448094 -14182056 - L1PA8 LINE L1 0 6172 5050 2261 82 3 13 chr5 185448094 185448400 -14181750 - AluY SINE Alu -8 303 1 6793 80 9 28 chr5 185448400 185448676 -14181474 - L1PA8 LINE L1 -1122 5050 4770 304 282 47 0 chr5 185448700 185448785 -14181365 - MIR SINE MIR -62 200 112 218 200 187 13 chr5 185449515 185449590 -14180560 + L2 LINE L2 3185 3272 -41 351 205 8 25 chr5 185449600 185449722 -14180428 + (TGGA)n Simple_repeat Simple_repeat 1 120 0 191 182 30 91 chr5 185450207 185450273 -14179877 + L2 LINE L2 3159 3220 -93 257 218 0 0 chr5 185450393 185450448 -14179702 + (TG)n Simple_repeat Simple_repeat 1 55 0 1280 125 17 73 chr5 185450500 185450732 -14179418 - MER20 DNA MER1_type 0 219 1 715 324 4 24 chr5 185450924 185451177 -14178973 + MIR SINE MIR 15 262 0 327 267 133 0 chr5 185451823 185451913 -14178237 - L2 LINE L2 -9 3263 3162 488 237 121 5 chr5 185451970 185452150 -14178000 + MIR SINE MIR 15 219 -43 2043 124 27 0 chr5 185452150 185452448 -14177702 - AluSx SINE Alu -5 307 2 253 380 0 0 chr5 185452455 185452526 -14177624 + L2 LINE L2 3216 3286 -27 * 253 299 0 15 chr5 185452529 185452596 -14177554 + L2 LINE L2 3239 3304 -9 191 341 12 0 chr5 185452718 185452800 -14177350 + MIR SINE MIR 92 174 -88 216 325 8 8 chr5 185454031 185454157 -14175993 + L3 LINE CR1 1106 1231 -346 536 300 11 62 chr5 185454336 185454500 -14175650 - MIR SINE MIR -11 251 103 625 296 16 0 chr5 185454500 185454689 -14175461 - MER91A DNA MER1_type -3 193 2 536 300 11 62 chr5 185454689 185454784 -14175366 - MIR SINE MIR -159 103 5 550 176 80 0 chr5 185454887 185455012 -14175138 - MIR SINE MIR -72 190 56 226 354 0 0 chr5 185455074 185455139 -14175011 + G-rich Low_complexity Low_complexity 1 65 0 568 255 55 27 chr5 185455346 185455566 -14174584 + MIR SINE MIR 36 262 0 260 231 46 0 chr5 185456412 185456477 -14173673 - L1MB3 LINE L1 0 6183 6116 279 310 207 0 chr5 185457206 185457351 -14172799 + MER91A DNA MER1_type 2 176 -20 264 200 0 0 chr5 185458030 185458095 -14172055 + (CA)n Simple_repeat Simple_repeat 2 66 0 301 214 100 14 chr5 185458605 185458675 -14171475 - MIR SINE MIR -62 146 71 1851 142 38 3 chr5 185458676 185458965 -14171185 - AluSx SINE Alu -13 299 1 421 234 11 63 chr5 185459740 185459915 -14170235 + HAL1b LINE L1 584 749 -599 1090 225 87 61 chr5 185460233 185460578 -14169572 + HAL1b LINE L1 748 1116 -232 2341 62 0 0 chr5 185460578 185460854 -14169296 + AluY SINE Alu 28 303 -8 1090 225 87 61 chr5 185460854 185461094 -14169056 + HAL1b LINE L1 1116 1348 0 606 178 119 25 chr5 185461119 185461237 -14168913 + FLAM_A SINE Alu 4 132 -1 252 296 0 0 chr5 185461242 185461323 -14168827 - L1ME4a LINE L1 -70 6051 5971 605 190 0 9 chr5 185461333 185461503 -14168647 - FLAM_A SINE Alu 0 169 1 226 297 176 7 chr5 185461551 185461699 -14168451 + MIR SINE MIR 20 192 -70 627 200 0 0 chr5 185462573 185462683 -14167467 + FRAM SINE Alu 37 146 -30 201 74 0 0 chr5 185462686 185462713 -14167437 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr5 185463393 185463421 -14166729 + AT_rich Low_complexity Low_complexity 1 28 0 391 264 83 35 chr5 185463511 185463655 -14166495 - MIR SINE MIR -92 170 20 5116 176 16 28 chr5 185463668 185464806 -14165344 - L1MA9 LINE L1 -37 6275 5154 2047 128 63 38 chr5 185464831 185465197 -14164953 - THE1C LTR MaLR 0 375 1 9775 130 11 41 chr5 185465197 185466823 -14163327 - THE1C-int LTR MaLR 0 1580 3 1776 163 67 28 chr5 185466825 185467186 -14162964 - THE1C LTR MaLR 0 375 1 324 257 0 0 chr5 185467298 185467732 -14162418 + (TA)n Simple_repeat Simple_repeat 1 434 0 306 241 0 0 chr5 185467752 185467839 -14162311 + (TA)n Simple_repeat Simple_repeat 1 87 0 254 315 94 16 chr5 185468034 185468161 -14161989 - MIR SINE MIR -76 186 50 1481 207 75 26 chr5 185468363 185468711 -14161439 - MLT1A1 LTR MaLR 0 365 1 187 266 0 47 chr5 185469203 185469267 -14160883 + L2 LINE L2 3244 3304 -9 514 312 94 5 chr5 185469651 185469853 -14160297 + MIR SINE MIR 29 248 -14 597 298 24 29 chr5 185469949 185470157 -14159993 + MIR SINE MIR 45 251 -11 227 375 0 0 chr5 185470202 185470282 -14159868 + L3 LINE CR1 1385 1464 -113 715 246 6 22 chr5 185470396 185470579 -14159571 + MIR SINE MIR 45 224 -38 275 227 30 0 chr5 185470599 185470665 -14159485 + CT-rich Low_complexity Low_complexity 4 71 0 415 285 99 46 chr5 185471229 185471492 -14158658 - MER102b DNA MER1_type 0 341 65 195 42 0 0 chr5 185471553 185471577 -14158573 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 255 61 0 0 chr5 185472851 185472884 -14157266 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 257 239 56 0 chr5 185473651 185473722 -14156428 - MIR SINE MIR -69 139 65 318 253 294 0 chr5 185473763 185473909 -14156241 - MER5A DNA MER1_type 0 189 1 2385 106 0 3 chr5 185474345 185474657 -14155493 - AluSx SINE Alu -1 311 1 317 138 17 0 chr5 185474785 185474843 -14155307 + MER113 DNA MER1_type? 30 88 -433 2038 201 53 113 chr5 185474936 185475617 -14154533 - MER21B LTR ERV1 -126 737 98 327 317 0 0 chr5 185475656 185475738 -14154412 - MER21B LTR ERV1 -767 96 15 671 159 0 0 chr5 185475884 185475997 -14154153 - FRAM SINE Alu -26 150 38 821 261 61 11 chr5 185476001 185476262 -14153888 + MER113 DNA MER1_type? 248 521 0 890 265 4 21 chr5 185477337 185477575 -14152575 - MIR SINE MIR -1 261 28 383 320 68 79 chr5 185477711 185478077 -14152073 - L2 LINE L2 0 3272 2911 203 339 127 23 chr5 185478484 185478705 -14151445 + L2 LINE L2 3026 3269 -3 568 243 7 7 chr5 185479280 185479420 -14150730 - MIR SINE MIR -21 241 102 3472 162 52 20 chr5 185479421 185480058 -14150092 + LTR51 LTR ERV1 1 657 -14 1417 246 71 69 chr5 185480071 185480619 -14149531 - LTR38B LTR ERV1 -19 591 47 2004 126 41 3 chr5 185480619 185480912 -14149238 - AluSg SINE Alu -6 304 1 1417 246 71 69 chr5 185480912 185480960 -14149190 - LTR38B LTR ERV1 -563 47 1 204 322 34 0 chr5 185481024 185481083 -14149067 - MIR SINE MIR -200 62 2 742 177 0 15 chr5 185481430 185481560 -14148590 - AluJb SINE Alu -55 257 130 28 0 0 0 chr5 185481563 185481591 -14148559 + AT_rich Low_complexity Low_complexity 1 28 0 602 181 43 29 chr5 185482517 185482655 -14147495 + MIR SINE MIR 74 213 -49 1068 149 0 12 chr5 185482922 185483083 -14147067 + FRAM SINE Alu 1 157 -19 29 60 0 0 chr5 185483258 185483308 -14146842 + AT_rich Low_complexity Low_complexity 1 50 0 2500 88 0 0 chr5 185483464 185483772 -14146378 - AluSx SINE Alu -4 308 1 684 297 48 35 chr5 185484436 185484979 -14145171 - L2 LINE L2 -85 3228 2677 3250 215 58 22 chr5 185484999 185485578 -14144572 - L1ME1 LINE L1 0 6166 5537 1891 166 0 10 chr5 185485578 185485874 -14144276 - AluJb SINE Alu -14 298 6 3250 215 58 22 chr5 185485874 185486234 -14143916 - L1ME1 LINE L1 -629 5537 5191 198 301 12 24 chr5 185486346 185486429 -14143721 - MIR SINE MIR -65 143 62 1785 183 3 0 chr5 185487002 185487297 -14142853 - AluJo SINE Alu -16 296 1 339 244 147 51 chr5 185487359 185487556 -14142594 + MIR SINE MIR 16 231 -31 366 113 19 0 chr5 185487841 185487894 -14142256 - AluJo SINE Alu -137 165 112 417 238 9 19 chr5 185488140 185488245 -14141905 - MIR SINE MIR -128 134 31 249 315 138 35 chr5 185490114 185490278 -14139872 + L2 LINE L2 2706 2852 -420 2096 127 3 3 chr5 185490278 185490570 -14139580 - AluSx SINE Alu -20 292 1 249 315 138 35 chr5 185490570 185490735 -14139415 + L2 LINE L2 2852 3072 -200 1385 169 0 25 chr5 185490781 185491023 -14139127 - MER46A DNA MER2_type 0 236 1 471 281 41 7 chr5 185491405 185491551 -14138599 + L2 LINE L2 3122 3272 0 923 123 97 26 chr5 185492397 185492551 -14137599 - AluSg/x SINE Alu -11 301 137 2464 131 33 30 chr5 185493290 185493717 -14136433 - MSTA LTR MaLR 0 428 1 248 250 189 61 chr5 185493774 185493938 -14136212 - L2 LINE L2 -25 3288 3104 2173 99 3 3 chr5 185494175 185494498 -14135652 - AluSc SINE Alu 0 323 1 2066 152 54 3 chr5 185495005 185495354 -14134796 - MLT1B LTR MaLR 0 390 24 181 355 0 0 chr5 185495617 185495679 -14134471 - L2 LINE L2 -335 2937 2876 240 222 0 0 chr5 185496070 185496115 -14134035 - MLT2C2 LTR ERVL 0 520 476 * 1762 176 14 3 chr5 185496113 185496409 -14133741 - MLT2C2 LTR ERVL -163 301 3 513 251 69 35 chr5 185496794 185496997 -14133153 + MIR SINE MIR 12 221 -41 1753 173 18 0 chr5 185497042 185497354 -14132796 + AluJo SINE Alu 1 317 0 874 245 41 25 chr5 185497357 185497659 -14132491 + MLT1I LTR MaLR 65 370 -39 305 241 28 28 chr5 185498896 185499004 -14131146 + MER113 DNA MER1_type? 5 112 -409 25 0 0 0 chr5 185499075 185499100 -14131050 + AT_rich Low_complexity Low_complexity 1 25 0 317 324 34 27 chr5 185499277 185499425 -14130725 + MIR3 SINE MIR 54 202 -6 954 282 64 88 chr5 185499527 185500030 -14130120 - MLT1K LTR MaLR -14 574 84 412 259 53 30 chr5 185501091 185501222 -14128928 - L2 LINE L2 -2 3270 3137 238 288 141 47 chr5 185502157 185502327 -14127823 - MIR SINE MIR -52 210 25 927 167 12 12 chr5 185503148 185503316 -14126834 + LTR54 LTR ERV1 1 168 -342 212 222 0 16 chr5 185503336 185503399 -14126751 + GA-rich Low_complexity Low_complexity 1 62 0 1776 161 57 20 chr5 185503399 185503752 -14126398 + LTR54 LTR ERV1 145 510 0 1850 155 0 35 chr5 185503953 185504270 -14125880 - AluJb SINE Alu -5 307 2 270 73 0 0 chr5 185505124 185505165 -14124985 + (TATG)n Simple_repeat Simple_repeat 2 42 0 309 277 88 36 chr5 185505831 185505968 -14124182 - MIR SINE MIR -110 152 9 359 292 0 0 chr5 185506910 185507006 -14123144 + MIR SINE MIR 6 101 -161 1097 101 30 6 chr5 185507073 185507212 -14122938 + L1MA2 LINE L1 6132 6277 -27 495 48 0 0 chr5 185507212 185507274 -14122876 + (TG)n Simple_repeat Simple_repeat 1 62 0 1097 101 30 6 chr5 185507274 185507303 -14122847 + L1MA2 LINE L1 6277 6304 0 30 0 0 0 chr5 185507303 185507333 -14122817 + AT_rich Low_complexity Low_complexity 1 30 0 1995 141 0 3 chr5 185507339 185507636 -14122514 + AluSx SINE Alu 2 297 -15 501 283 73 11 chr5 185507876 185508067 -14122083 + MIR SINE MIR 3 205 -57 334 291 119 25 chr5 185508823 185509041 -14121109 + MIR SINE MIR 19 250 -12 245 272 82 86 chr5 185509776 185510055 -14120095 + L2 LINE L2 2950 3227 -45 884 270 17 0 chr5 185510738 185510975 -14119175 - MIR SINE MIR 0 262 22 2120 145 0 0 chr5 185511021 185511325 -14118825 - AluSx SINE Alu -8 304 1 632 312 78 4 chr5 185511344 185511575 -14118575 + MIR SINE MIR 2 249 -13 1908 130 0 63 chr5 185511879 185512194 -14117956 + AluSx SINE Alu 1 295 -17 299 278 73 33 chr5 185512222 185512373 -14117777 + MER103 DNA DNA 3 159 -7 282 280 237 19 chr5 185514748 185514959 -14115191 + MIR SINE MIR 6 262 0 397 255 90 35 chr5 185515712 185515857 -14114293 + MIR SINE MIR 100 252 -10 387 365 5 23 chr5 185515907 185516126 -14114024 - MIR SINE MIR -30 232 18 195 162 0 0 chr5 185516706 185516743 -14113407 + (TG)n Simple_repeat Simple_repeat 1 37 0 218 303 26 13 chr5 185517129 185517205 -14112945 + MIR SINE MIR 11 87 -175 186 191 0 0 chr5 185517363 185517405 -14112745 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 227 178 0 0 chr5 185517407 185517452 -14112698 + LTR66 LTR ERVL 394 438 -172 183 80 0 0 chr5 185518046 185518071 -14112079 + (T)n Simple_repeat Simple_repeat 1 25 0 1757 281 16 20 chr5 185518076 185518621 -14111529 - L1ME3 LINE L1 -1 6161 5619 484 257 68 7 chr5 185519488 185519636 -14110514 - MER103 DNA DNA -7 159 3 2088 111 11 0 chr5 185520236 185520540 -14109610 + AluSx SINE Alu 1 307 0 196 345 30 18 chr5 185520576 185520741 -14109409 - L2 LINE L2 -419 2895 2729 760 263 82 19 chr5 185521915 185522185 -14107965 - MLT1K LTR MaLR -1 587 301 267 158 4 0 chr5 185522327 185522388 -14107762 + FAM SINE Alu 128 175 -4 276 109 31 31 chr5 185522883 185522947 -14107203 + CT-rich Low_complexity Low_complexity 1 64 0 1888 116 24 61 chr5 185523179 185523473 -14106677 - AluSc SINE Alu -26 283 1 699 238 108 18 chr5 185524314 185524537 -14105613 - LTR67 LTR ERVL -313 244 2 340 265 84 48 chr5 185525013 185525179 -14104971 + MIR SINE MIR 90 261 -1 683 244 12 78 chr5 185525696 185525938 -14104212 + MIR SINE MIR 8 233 -29 644 254 217 25 chr5 185525999 185526400 -14103750 + L2 LINE L2 2819 3296 -17 278 266 88 35 chr5 185526397 185526510 -14103640 - MIR SINE MIR -94 168 50 * 198 0 0 0 chr5 185527933 185527955 -14102195 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 7248 44 6 3 chr5 185527956 185529026 -14101124 - L1PA6 LINE L1 -1 6153 5084 294 347 83 0 chr5 185529074 185529195 -14100955 - L2 LINE L2 -10 3262 3132 883 162 7 0 chr5 185529404 185529546 -14100604 + AluSg/x SINE Alu 169 311 -1 352 271 88 21 chr5 185529646 185529838 -14100312 - MIR SINE MIR -12 250 46 427 316 149 45 chr5 185530283 185531067 -14099083 - L2 LINE L2 -555 2759 1894 319 268 72 64 chr5 185531984 185532219 -14097931 - L2 LINE L2 0 3313 3077 522 139 271 7 chr5 185532234 185532378 -14097772 + MIR SINE MIR 4 185 -77 23 0 0 0 chr5 185532389 185532412 -14097738 + AT_rich Low_complexity Low_complexity 1 23 0 2215 115 0 0 chr5 185532412 185532699 -14097451 - AluSx SINE Alu -25 287 1 1776 158 54 4 chr5 185533333 185533611 -14096539 - AluJo SINE Alu -20 292 1 2348 130 8 19 chr5 185533655 185534023 -14096127 + THE1B LTR MaLR 1 364 0 2119 122 7 0 chr5 185534283 185534578 -14095572 + AluSx SINE Alu 1 297 -15 204 247 21 21 chr5 185534661 185534754 -14095396 + L2 LINE L2 1963 2055 -1259 555 334 126 13 chr5 185534810 185535271 -14094879 + L2 LINE L2 2170 2682 -632 456 237 79 22 chr5 185535273 185535412 -14094738 - L1M4 LINE L1 -1901 4245 4099 369 307 56 30 chr5 185535500 185535731 -14094419 - L1MEc LINE L1 -4137 2259 2023 499 111 0 0 chr5 185535909 185535990 -14094160 + L1MB2 LINE L1 6091 6171 0 393 323 52 7 chr5 185536169 185536324 -14093826 - HAL1 LINE L1 -970 1537 1376 1029 286 105 74 chr5 185536344 185537538 -14092612 - L1MEc LINE L1 -4886 1319 89 491 348 22 34 chr5 185537554 185537949 -14092201 + L2 LINE L2 2683 3070 -202 184 212 0 0 chr5 185538066 185538099 -14092051 + L2 LINE L2 3218 3250 -22 1842 124 110 110 chr5 185538198 185538625 -14091525 - MSTA LTR MaLR -1 427 1 204 324 40 14 chr5 185539338 185539412 -14090738 - L2 LINE L2 -14 3299 3224 461 346 57 35 chr5 185539561 185539855 -14090295 - L2 LINE L2 -218 3054 2748 3701 182 103 23 chr5 185539855 185540653 -14089497 + MER21B LTR ERV1 1 862 -1 461 346 57 35 chr5 185540653 185540868 -14089282 - L2 LINE L2 -524 2748 2539 1829 157 41 3 chr5 185543275 185543569 -14086581 - AluJb SINE Alu -7 305 1 2437 74 0 23 chr5 185544250 185544560 -14085590 - AluY SINE Alu -8 303 1 205 244 0 0 chr5 185544581 185544626 -14085524 + L2 LINE L2 3217 3261 -11 * 224 175 0 0 chr5 185544587 185544627 -14085523 + MIR SINE MIR 219 258 -4 631 246 118 5 chr5 185544710 185544913 -14085237 - MIR SINE MIR 0 262 37 203 326 205 19 chr5 185545506 185545721 -14084429 - L3b LINE CR1 -27 1556 1302 701 186 0 8 chr5 185545734 185545858 -14084292 + FLAM_A SINE Alu 1 123 -10 214 312 69 32 chr5 185545935 185546124 -14084026 - MIR SINE MIR -10 252 57 375 184 50 7 chr5 185546251 185546392 -14083758 + (TA)n Simple_repeat Simple_repeat 2 148 0 202 326 93 0 chr5 185546606 185546692 -14083458 + MIR SINE MIR 22 115 -93 288 315 16 24 chr5 185546778 185546905 -14083245 + MIR3 SINE MIR 60 185 -23 242 224 13 40 chr5 185546976 185547052 -14083098 - LTR67 LTR ERVL -27 530 457 211 174 144 91 chr5 185547690 185547822 -14082328 + MIR SINE MIR 51 189 -19 391 315 111 0 chr5 185547980 185548215 -14081935 + MIR SINE MIR 2 262 0 317 324 0 7 chr5 185548547 185548689 -14081461 + GA-rich Low_complexity Low_complexity 2 142 0 21 36 0 0 chr5 185550614 185550642 -14079508 + AT_rich Low_complexity Low_complexity 1 28 0 243 355 33 22 chr5 185550771 185550954 -14079196 + MER5A DNA MER1_type 4 188 -1 341 345 20 0 chr5 185551269 185551417 -14078733 - MIR SINE MIR -28 234 84 306 366 0 8 chr5 185552003 185552137 -14078013 - MIR SINE MIR -116 146 14 272 284 14 0 chr5 185552714 185552788 -14077362 + GA-rich Low_complexity Low_complexity 1 75 0 344 235 0 0 chr5 185552840 185552908 -14077242 + MIR SINE MIR 74 141 -121 336 333 41 14 chr5 185553426 185553573 -14076577 + MIR SINE MIR 84 234 -28 224 262 27 55 chr5 185554017 185554116 -14076034 + MIR SINE MIR 32 126 -85 249 328 52 43 chr5 185554344 185554460 -14075690 - MIR SINE MIR -141 121 5 281 240 208 10 chr5 185554787 185554883 -14075267 + L2 LINE L2 3188 3302 -11 189 0 0 0 chr5 185554885 185554906 -14075244 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 1643 164 0 80 chr5 185554908 185555232 -14074918 + AluJo SINE Alu 1 298 -14 2239 99 3 0 chr5 185555236 185555528 -14074622 + AluSg SINE Alu 2 294 -16 298 274 0 63 chr5 185555561 185555656 -14074494 - MIR SINE MIR -18 244 156 1407 135 37 20 chr5 185555661 185555906 -14074244 - L1PA8 LINE L1 -20 6152 5904 435 318 70 0 chr5 185555945 185556074 -14074076 - MIR SINE MIR -113 149 12 263 122 20 0 chr5 185556559 185556608 -14073542 + GA-rich Low_complexity Low_complexity 1 50 0 592 271 24 18 chr5 185557173 185557339 -14072811 + MIR SINE MIR 48 214 -48 1409 195 10 34 chr5 185557369 185557719 -14072431 - AluJo SINE Alu 0 312 1 222 286 31 10 chr5 185557758 185557856 -14072294 + (TA)n Simple_repeat Simple_repeat 1 100 0 218 253 23 11 chr5 185557864 185557936 -14072214 + (TAA)n Simple_repeat Simple_repeat 2 77 -12 2111 118 0 10 chr5 185557936 185558242 -14071908 + AluSx SINE Alu 1 303 -9 218 253 23 11 chr5 185558242 185558256 -14071894 + (TAA)n Simple_repeat Simple_repeat 77 89 0 2295 104 3 0 chr5 185559119 185559416 -14070734 + AluSq SINE Alu 1 298 -15 371 234 38 70 chr5 185559739 185559897 -14070253 - MER103 DNA DNA -3 163 11 458 305 159 24 chr5 185560114 185560846 -14069304 + L1ME4a LINE L1 5193 6027 -94 24 0 0 0 chr5 185560945 185560969 -14069181 + AT_rich Low_complexity Low_complexity 1 24 0 440 355 91 5 chr5 185561032 185561252 -14068898 + MIR SINE MIR 5 243 -19 458 303 91 25 chr5 185561724 185561965 -14068185 - MIR SINE MIR 0 262 6 1217 162 9 9 chr5 185562787 185563016 -14067134 - L1MD3 LINE L1 -3 7992 7764 415 298 82 66 chr5 185563031 185563350 -14066800 + L2 LINE L2 2990 3313 0 526 323 55 10 chr5 185563570 185563771 -14066379 + MIR SINE MIR 34 243 -19 327 261 22 11 chr5 185564439 185564531 -14065619 - MER5A DNA MER1_type -5 184 92 343 169 12 60 chr5 185564774 185564857 -14065293 - L1MC4a LINE L1 -1879 5929 5851 584 303 4 44 chr5 185566856 185567084 -14063066 + MIR SINE MIR 12 230 -32 288 0 0 0 chr5 185567320 185567352 -14062798 + (TTG)n Simple_repeat Simple_repeat 2 33 0 404 19 19 0 chr5 185567547 185567600 -14062550 + (CA)n Simple_repeat Simple_repeat 1 54 0 324 319 13 8 chr5 185567631 185567749 -14062401 + MIR SINE MIR 57 178 -63 239 177 16 0 chr5 185568167 185568229 -14061921 + GA-rich Low_complexity Low_complexity 2 64 0 6027 120 55 20 chr5 185568550 185569249 -14060901 - L1PA15 LINE L1 0 6165 5467 1937 123 41 0 chr5 185569249 185569542 -14060608 - AluSq SINE Alu -8 305 1 6027 120 55 20 chr5 185569542 185569921 -14060229 - L1PA15 LINE L1 -698 5467 5102 322 342 43 8 chr5 185570001 185570118 -14060032 + MIR SINE MIR 29 149 -113 453 259 154 49 chr5 185570402 185570668 -14059482 - MLT1I LTR MaLR -14 395 102 235 134 164 30 chr5 185570676 185570743 -14059407 - MLT1J2 LTR MaLR -307 143 68 194 317 37 24 chr5 185570792 185570874 -14059276 - MIR SINE MIR -177 85 3 212 288 14 14 chr5 185571393 185571466 -14058684 + L2 LINE L2 2991 3063 -209 321 298 16 16 chr5 185572075 185572196 -14057954 + MER5A DNA MER1_type 47 167 -22 1720 202 3 16 chr5 185572777 185573084 -14057066 - AluJo SINE Alu -9 303 1 1268 293 48 35 chr5 185573220 185573765 -14056385 - L1ME3A LINE L1 -286 5884 5314 2372 77 3 10 chr5 185573765 185574065 -14056085 - AluSg SINE Alu -12 298 1 1268 293 48 35 chr5 185574065 185574502 -14055648 - L1ME3A LINE L1 -856 5314 4884 186 162 0 27 chr5 185574894 185574931 -14055219 + MIR SINE MIR 25 60 -148 297 269 26 0 chr5 185574952 185575030 -14055120 - MIR SINE MIR 0 262 183 212 283 151 0 chr5 185575035 185575141 -14055009 + MIR3 SINE MIR 81 202 -6 2348 110 45 31 chr5 185576194 185576550 -14053600 + THE1B LTR MaLR 4 364 0 421 264 83 94 chr5 185576772 185577026 -14053124 - MIR SINE MIR -4 258 8 467 274 118 75 chr5 185577212 185577371 -14052779 - Charlie8 DNA MER1_type -1881 536 385 2078 132 0 3 chr5 185577371 185577691 -14052459 - AluSx SINE Alu 0 312 1 467 274 118 75 chr5 185577691 185577903 -14052247 - Charlie8 DNA MER1_type -2032 385 149 46 83 0 0 chr5 185578046 185578155 -14051995 + AT_rich Low_complexity Low_complexity 1 109 0 266 84 14 42 chr5 185578598 185578669 -14051481 + (TA)n Simple_repeat Simple_repeat 1 69 0 1722 184 0 7 chr5 185578669 185578946 -14051204 - AluJo SINE Alu -37 275 1 1981 122 93 42 chr5 185579086 185579440 -14050710 + THE1C LTR MaLR 4 375 0 326 333 22 17 chr5 185580091 185580271 -14049879 + MIR SINE MIR 63 243 -19 388 268 87 29 chr5 185580337 185580475 -14049675 + MIR3 SINE MIR 18 163 -45 222 328 15 37 chr5 185580624 185580758 -14049392 - MIR SINE MIR -13 249 119 242 222 0 0 chr5 185581318 185581372 -14048778 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 336 214 29 0 chr5 185581390 185581460 -14048690 - L1MA7 LINE L1 -356 5935 5864 680 154 18 0 chr5 185581475 185581585 -14048565 + L1MC1 LINE L1 6199 6310 -23 312 219 219 35 chr5 185581650 185581764 -14048386 - MIR3 SINE MIR -60 148 14 405 0 0 0 chr5 185582784 185582829 -14047321 + (TG)n Simple_repeat Simple_repeat 2 46 0 3806 150 29 7 chr5 185583235 185583827 -14046323 - MER6A DNA MER2_type 0 605 1 551 270 81 0 chr5 185583829 185583977 -14046173 + MIR3 SINE MIR 33 192 -16 23 0 0 0 chr5 185584988 185585011 -14045139 + AT_rich Low_complexity Low_complexity 1 23 0 246 350 42 21 chr5 185585218 185585361 -14044789 + L2 LINE L2 2181 2326 -988 237 322 185 7 chr5 185585879 185586025 -14044125 + MIR SINE MIR 85 256 -6 201 212 0 30 chr5 185586029 185586095 -14044055 + (TTA)n Simple_repeat Simple_repeat 1 64 0 21 0 0 0 chr5 185586230 185586251 -14043899 + AT_rich Low_complexity Low_complexity 1 21 0 558 314 21 16 chr5 185586791 185586979 -14043171 - MIR3 SINE MIR -3 205 17 946 206 165 16 chr5 185587002 185587371 -14042779 - MER113 DNA MER1_type? -35 486 63 236 311 168 17 chr5 185589141 185589260 -14040890 + MIR SINE MIR 18 154 -108 27 0 0 0 chr5 185589291 185589318 -14040832 + AT_rich Low_complexity Low_complexity 1 27 0 426 155 243 0 chr5 185589326 185589429 -14040721 - L1ME2 LINE L1 -15 6149 6022 656 213 98 12 chr5 185589468 185589632 -14040518 - MIR SINE MIR -11 251 74 328 328 62 0 chr5 185590214 185590342 -14039808 - HAL1b LINE L1 -1212 136 1 252 336 23 16 chr5 185590506 185590634 -14039516 + L2 LINE L2 2272 2400 -914 4251 89 0 23 chr5 185591320 185591892 -14038258 - L1PA13 LINE L1 0 6163 5605 398 299 53 25 chr5 185593248 185593399 -14036751 - MIR3 SINE MIR -92 170 3 304 295 54 31 chr5 185593618 185593747 -14036403 - L2 LINE L2 0 3272 3141 299 312 193 35 chr5 185594136 185594338 -14035812 + MIR SINE MIR 20 253 -9 413 221 29 0 chr5 185594830 185594970 -14035180 + (TATATG)n Simple_repeat Simple_repeat 5 148 0 754 180 8 8 chr5 185594978 185595100 -14035050 - FLAM_A SINE Alu -11 122 1 281 290 0 83 chr5 185595717 185595862 -14034288 + L2 LINE L2 2490 2622 -692 781 219 62 0 chr5 185595868 185596028 -14034122 + MIR SINE MIR 2 171 -91 446 351 55 17 chr5 185596172 185596526 -14033624 + L2 LINE L2 2774 3138 -175 426 267 89 25 chr5 185596688 185596890 -14033260 + LTR16C LTR ERVL 277 491 0 257 254 0 0 chr5 185596973 185597036 -14033114 + (TA)n Simple_repeat Simple_repeat 1 63 0 2401 74 3 0 chr5 185597133 185597431 -14032719 + AluY SINE Alu 1 299 -12 582 133 24 0 chr5 185597438 185597521 -14032629 + FLAM_C SINE Alu 36 120 -23 281 274 134 38 chr5 185599163 185599494 -14030656 - L2 LINE L2 -191 3081 2725 224 291 122 47 chr5 185599558 185599730 -14030420 - L2 LINE L2 -783 2531 2347 216 372 44 22 chr5 185600723 185600860 -14029290 - L3 LINE CR1 -11 1566 1427 280 182 36 0 chr5 185601217 185601272 -14028878 + L2 LINE L2 3255 3311 -2 1750 169 10 7 chr5 185602298 185602593 -14027557 - AluJo SINE Alu -16 296 1 308 310 190 0 chr5 185602896 185603012 -14027138 - L2 LINE L2 -1 3271 3134 314 290 23 23 chr5 185603161 185603292 -14026858 - LTR67 LTR ERVL 0 557 427 183 156 0 0 chr5 185603396 185603428 -14026722 + T-rich Low_complexity Low_complexity 3 34 0 1795 120 0 129 chr5 185603433 185603790 -14026360 - AluSx SINE Alu -1 311 1 694 236 179 5 chr5 185603808 185604020 -14026130 + MIR SINE MIR 12 260 -2 1506 147 0 0 chr5 185604649 185604867 -14025283 - AluSg/x SINE Alu -11 301 84 371 281 102 40 chr5 185604878 185605152 -14024998 + L1MC4a LINE L1 5667 5957 -1851 333 0 0 0 chr5 185606916 185606953 -14023197 + (TG)n Simple_repeat Simple_repeat 1 37 0 381 276 103 54 chr5 185607070 185607273 -14022877 - MIR SINE MIR -36 226 14 1467 159 6 100 chr5 185607568 185607889 -14022261 + AluJo SINE Alu 1 291 -21 213 39 0 0 chr5 185608775 185608801 -14021349 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 822 90 0 0 chr5 185608801 185608901 -14021249 - AluJb SINE Alu -192 120 21 2234 194 68 40 chr5 185608930 185609587 -14020563 + LTR28 LTR ERV1 10 636 0 307 258 47 55 chr5 185609589 185609717 -14020433 - MER5B DNA MER1_type -49 129 3 383 220 168 81 chr5 185609725 185609898 -14020252 - MER5A DNA MER1_type -1 188 1 2585 55 0 10 chr5 185610027 185610337 -14019813 + AluY SINE Alu 1 307 -4 2020 130 3 10 chr5 185611471 185611771 -14018379 - AluSx SINE Alu -14 298 1 205 372 63 30 chr5 185612176 185612571 -14017579 + L2 LINE L2 2824 3231 -41 1910 172 100 22 chr5 185612861 185613321 -14016829 - LTR54B LTR ERV1 -2 496 1 330 121 0 0 chr5 185613436 185613502 -14016648 + (CA)n Simple_repeat Simple_repeat 2 67 0 274 213 62 0 chr5 185614200 185614280 -14015870 - MIR SINE MIR -98 164 80 270 279 63 0 chr5 185614401 185614480 -14015670 - L2 LINE L2 -4 3309 3226 205 240 40 0 chr5 185614486 185614536 -14015614 + MIR SINE MIR 57 108 -154 3559 124 9 15 chr5 185614536 185615062 -14015088 + MER1A DNA MER1_type 7 529 0 1215 216 13 21 chr5 185615598 185615991 -14014159 - MER63 DNA MER1_type -5 1056 1 2783 234 48 8 chr5 185616475 185617178 -14012972 + L1MC4a LINE L1 6079 6242 0 379 229 51 42 chr5 185617971 185618089 -14012061 - MER96B DNA MER1_type? -6 411 293 * 668 134 37 73 chr5 185618086 185618250 -14011900 - MER96B DNA MER1_type? -257 160 3 1320 97 34 5 chr5 185619170 185619377 -14010773 - L1MA2 LINE L1 0 6304 6092 259 309 0 0 chr5 185619408 185619463 -14010687 + Charlie8 DNA MER1_type 12 66 -2351 282 313 0 0 chr5 185619837 185619917 -14010233 - L2 LINE L2 -10 3262 3183 182 304 9 61 chr5 185620231 185620346 -14009804 + L2 LINE L2 3162 3270 -2 418 301 65 16 chr5 185620734 185620857 -14009293 + L2 LINE L2 3134 3262 -10 254 299 113 10 chr5 185620883 185620980 -14009170 + MIR SINE MIR 20 126 -136 247 254 0 0 chr5 185621185 185621240 -14008910 + MIR SINE MIR 50 104 -104 1075 159 0 0 chr5 185621638 185621808 -14008342 + AluSp SINE Alu 134 303 -10 1642 197 0 0 chr5 185621827 185622111 -14008039 + AluJo SINE Alu 12 295 -17 43672 53 2 1 chr5 185622122 185628253 -14001897 + L1PA5 LINE L1 11 6147 -7 192 97 0 0 chr5 185628303 185628334 -14001816 + (A)n Simple_repeat Simple_repeat 1 31 0 231 152 0 0 chr5 185628540 185628586 -14001564 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 187 260 130 39 chr5 185629419 185629496 -14000654 + L2 LINE L2 3154 3237 -35 351 307 24 66 chr5 185629509 185629675 -14000475 - MER5B DNA MER1_type -19 159 1 254 281 49 12 chr5 185631323 185631405 -13998745 - L2 LINE L2 -31 3282 3198 625 284 49 13 chr5 185632572 185632797 -13997353 + MIR SINE MIR 21 253 -9 311 276 86 0 chr5 185632832 185632948 -13997202 + MIR SINE MIR 131 256 -6 246 309 22 43 chr5 185634088 185634227 -13995923 + MIR SINE MIR 121 256 -6 193 203 79 21 chr5 185634251 185634344 -13995806 - MIR SINE MIR -70 138 86 614 276 67 32 chr5 185635780 185636077 -13994073 + HAL1 LINE L1 11 379 -2128 1074 299 26 3 chr5 185636090 185636434 -13993716 + HAL1 LINE L1 441 792 -1715 319 227 27 0 chr5 185636519 185636594 -13993556 + HAL1 LINE L1 716 792 -1715 328 213 27 0 chr5 185636599 185636674 -13993476 + HAL1 LINE L1 716 792 -1715 323 227 27 0 chr5 185636679 185636754 -13993396 + HAL1 LINE L1 716 792 -1715 330 227 27 0 chr5 185636759 185636834 -13993316 + HAL1 LINE L1 716 792 -1715 328 213 27 0 chr5 185636839 185636914 -13993236 + HAL1 LINE L1 716 792 -1715 330 227 27 0 chr5 185636919 185636994 -13993156 + HAL1 LINE L1 716 792 -1715 323 240 27 0 chr5 185637079 185637154 -13992996 + HAL1 LINE L1 716 792 -1715 459 266 79 44 chr5 185637159 185637501 -13992649 + HAL1 LINE L1 716 1069 -1438 591 261 50 103 chr5 185637551 185637737 -13992413 + HAL1 LINE L1 2069 2263 -244 2199 109 24 0 chr5 185637737 185638031 -13992119 - AluSx SINE Alu -11 301 1 591 261 50 103 chr5 185638031 185638236 -13991914 + HAL1 LINE L1 2263 2434 -73 1937 142 24 10 chr5 185638236 185638532 -13991618 - AluJb SINE Alu -12 300 1 591 261 50 103 chr5 185638532 185638603 -13991547 + HAL1 LINE L1 2434 2507 0 489 264 92 75 chr5 185638635 185639090 -13991060 - LTR37B LTR ERV1 0 468 6 907 217 47 43 chr5 185639093 185639393 -13990757 + MER113 DNA MER1_type? 178 478 -43 692 260 32 23 chr5 185640032 185640254 -13989896 - MIR SINE MIR -6 256 34 563 227 162 0 chr5 185640746 185640931 -13989219 + MIR SINE MIR 30 244 -18 206 274 16 0 chr5 185641568 185641630 -13988520 - L2 LINE L2 -9 3304 3242 194 284 136 57 chr5 185641690 185641778 -13988372 + MER5B DNA MER1_type 25 119 -59 262 293 94 38 chr5 185641833 185641939 -13988211 - MIR SINE MIR -57 151 40 603 258 115 6 chr5 185642236 185642418 -13987732 + LTR33A LTR ERVL 267 468 -55 191 264 38 94 chr5 185642445 185642482 -13987668 - MIR SINE MIR -73 135 97 2575 141 26 7 chr5 185642482 185642900 -13987250 - MSTA LTR MaLR 0 428 3 191 264 38 94 chr5 185642900 185642968 -13987182 - MIR SINE MIR -111 97 36 443 194 9 0 chr5 185643037 185643145 -13987005 + (ATG)n Simple_repeat Simple_repeat 2 110 0 243 208 19 0 chr5 185643926 185643979 -13986171 - Charlie8 DNA MER1_type -1000 1417 1364 350 207 46 0 chr5 185643986 185644073 -13986077 + L2 LINE L2 2716 2806 -508 648 238 60 35 chr5 185644152 185644434 -13985716 + L2 LINE L2 3025 3313 0 486 271 11 51 chr5 185644482 185644659 -13985491 - Charlie8 DNA MER1_type -2205 212 43 1760 127 0 8 chr5 185644829 185645081 -13985069 - AluSx SINE Alu -2 310 61 286 346 26 7 chr5 185645578 185645731 -13984419 + L2 LINE L2 2872 3027 -245 1680 61 5 0 chr5 185645809 185646032 -13984118 + AluY SINE Alu 86 309 0 2656 213 29 3 chr5 185646032 185646628 -13983522 - L1MB8 LINE L1 -6 6172 5562 2488 157 15 10 chr5 185646635 185647036 -13983114 - LTR57 LTR ERVL -7 404 2 839 202 75 0 chr5 185647036 185647234 -13982916 - L1MB8 LINE L1 -618 5566 5352 229 263 20 40 chr5 185647298 185647397 -13982753 + MIR SINE MIR 128 224 -38 288 316 143 8 chr5 185647856 185647989 -13982161 + L2 LINE L2 3121 3271 -1 243 295 0 0 chr5 185649060 185649155 -13980995 - L1MC4 LINE L1 -1333 6709 6615 5144 122 11 1 chr5 185649188 185649944 -13980206 - L1PB3 LINE L1 -3 6151 5389 581 241 40 11 chr5 185650171 185650345 -13979805 + MER117 DNA MER1_type 11 189 -8 394 157 159 0 chr5 185650535 185650647 -13979503 - MER104 DNA Tc2 0 182 36 220 269 100 31 chr5 185650713 185650843 -13979307 - MIR SINE MIR -98 164 26 501 281 22 0 chr5 185651755 185651890 -13978260 - MIR SINE MIR -121 141 4 233 283 113 43 chr5 185652621 185652851 -13977299 - MIR SINE MIR -2 260 15 262 254 0 15 chr5 185652920 185652987 -13977163 + (TG)n Simple_repeat Simple_repeat 2 67 0 201 147 0 0 chr5 185654019 185654053 -13976097 + (CTG)n Simple_repeat Simple_repeat 3 36 0 2272 144 22 3 chr5 185654084 185654452 -13975698 - THE1C LTR MaLR 0 375 1 192 125 0 0 chr5 185654555 185654587 -13975563 + (GA)n Simple_repeat Simple_repeat 2 33 0 361 322 28 14 chr5 185655031 185655174 -13974976 + MIR SINE MIR 118 262 0 2082 147 73 6 chr5 185655437 185655778 -13974372 + THE1B LTR MaLR 1 364 0 2387 69 40 13 chr5 185656286 185656589 -13973561 - AluY SINE Alu 0 311 1 2085 132 7 0 chr5 185656655 185656950 -13973200 - AluSx SINE Alu -15 297 1 188 259 148 12 chr5 185657048 185657129 -13973021 - MIR SINE MIR -96 112 21 526 269 36 36 chr5 185657467 185657686 -13972464 + MIR SINE MIR 1 219 -43 185 330 97 32 chr5 185657798 185658077 -13972073 - L2 LINE L2 -340 2974 2678 2165 136 35 32 chr5 185658293 185658667 -13971483 - THE1C LTR MaLR 0 375 1 192 77 0 0 chr5 185660203 185660229 -13969921 + (A)n Simple_repeat Simple_repeat 1 26 0 281 287 65 103 chr5 185660880 185661190 -13968960 - L2 LINE L2 -338 2976 2685 1710 162 3 40 chr5 185661190 185661487 -13968663 + AluJo SINE Alu 1 286 -26 281 287 65 103 chr5 185661487 185661605 -13968545 - L2 LINE L2 -629 2685 2564 187 324 148 19 chr5 185662199 185662307 -13967843 + MIR3 SINE MIR 81 202 -6 1695 172 37 0 chr5 185662428 185662725 -13967425 - AluJo SINE Alu 0 312 5 260 255 41 51 chr5 185662943 185663041 -13967109 - MIR SINE MIR -132 130 34 966 252 42 16 chr5 185663080 185663386 -13966764 - MER113 DNA MER1_type? -3 518 205 246 62 0 0 chr5 185664385 185664417 -13965733 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 306 306 5 32 chr5 185667010 185667172 -13962978 + MIR SINE MIR 34 192 -70 455 255 7 65 chr5 185667314 185667467 -13962683 + MIR SINE MIR 119 262 0 290 282 32 0 chr5 185668828 185668932 -13961218 + MIR SINE MIR 79 190 -63 392 271 42 0 chr5 185668980 185669098 -13961052 - L2 LINE L2 -2 3270 3148 2562 130 42 22 chr5 185669224 185669631 -13960519 - MER21A LTR ERV1 0 931 517 1348 101 80 34 chr5 185669639 185669876 -13960274 - MER21A LTR ERV1 -660 271 24 736 75 52 33 chr5 185669878 185670149 -13960001 + (TCTA)n Simple_repeat Simple_repeat 1 276 0 214 378 0 0 chr5 185670617 185670691 -13959459 - L2 LINE L2 -31 3241 3168 1756 174 3 10 chr5 185670947 185671241 -13958909 + AluJo SINE Alu 1 292 -20 259 301 24 16 chr5 185671351 185671474 -13958676 + MIR SINE MIR 2 125 -137 958 107 0 0 chr5 185673076 185673216 -13956934 - L1PA4 LINE L1 -3 6152 6013 1878 170 14 22 chr5 185673320 185673684 -13956466 - MLT1A1 LTR MaLR 0 365 5 721 267 48 0 chr5 185673882 185674092 -13956058 - MIR SINE MIR -12 250 31 587 240 121 3 chr5 185675240 185675453 -13954697 + MIR SINE MIR 33 262 0 2382 99 7 0 chr5 185676601 185676903 -13953247 + AluSx SINE Alu 1 304 -8 315 317 24 0 chr5 185677687 185677810 -13952340 + MER5A DNA MER1_type 42 167 -22 265 313 40 13 chr5 185677691 185677841 -13952309 - MER5A DNA MER1_type -35 154 1 * 288 239 87 0 chr5 185678088 185678180 -13951970 + MIR SINE MIR 91 190 -72 1791 173 137 17 chr5 185678380 185678802 -13951348 - MLT1D LTR MaLR -28 477 5 201 39 0 0 chr5 185680126 185680152 -13949998 + (TAGA)n Simple_repeat Simple_repeat 1 26 0 1412 232 18 42 chr5 185680712 185681165 -13948985 + MER113 DNA MER1_type? 6 447 -74 348 242 30 20 chr5 185682187 185682286 -13947864 - MIR3 SINE MIR -6 202 103 232 282 94 12 chr5 185683183 185683268 -13946882 - MIR SINE MIR -92 116 25 339 284 52 45 chr5 185687682 185687837 -13942313 + L2 LINE L2 3158 3313 0 240 188 125 0 chr5 185688059 185688123 -13942027 - MIR SINE MIR 0 262 191 710 212 6 12 chr5 185688125 185688295 -13941855 - MIR SINE MIR -3 259 91 464 259 187 12 chr5 185688320 185688486 -13941664 - MIR SINE MIR -62 200 6 421 101 0 21 chr5 185688588 185688659 -13941491 + THE1B LTR MaLR 296 356 -8 218 347 20 10 chr5 185688900 185688998 -13941152 - L3 LINE CR1 -52 1525 1427 185 217 183 0 chr5 185689085 185689145 -13941005 - MIR SINE MIR -72 190 120 583 310 41 12 chr5 185689343 185689585 -13940565 - MIR SINE MIR -1 261 13 494 245 25 25 chr5 185689771 185689930 -13940220 - L1ME4a LINE L1 -4 6117 5959 511 294 59 44 chr5 185689978 185690478 -13939672 - L1MC4a LINE L1 -327 5794 5373 196 314 52 9 chr5 185691096 185691254 -13938896 + MIR SINE MIR 13 220 -42 1188 215 5 0 chr5 185692087 185692310 -13937840 - MER58A DNA MER1_type 0 224 1 195 306 28 0 chr5 185692514 185692586 -13937564 - MIR SINE MIR -112 150 77 528 287 113 69 chr5 185693226 185693676 -13936474 + L2 LINE L2 2508 2977 -337 2142 115 0 40 chr5 185694173 185694496 -13935654 + AluSg SINE Alu 1 310 0 210 301 0 0 chr5 185694679 185694752 -13935398 - MIR3 SINE MIR -24 184 112 214 290 16 0 chr5 185694801 185694863 -13935287 + L2 LINE L2 3201 3263 -9 183 254 14 70 chr5 185694864 185694935 -13935215 - MIR SINE MIR -110 98 32 210 295 26 0 chr5 185695315 185695393 -13934757 + T-rich Low_complexity Low_complexity 5 84 0 * 308 287 6 55 chr5 185695362 185695543 -13934607 + CT-rich Low_complexity Low_complexity 5 176 0 198 0 0 0 chr5 185695709 185695731 -13934419 + (CTG)n Simple_repeat Simple_repeat 1 22 0 311 248 72 40 chr5 185696586 185696711 -13933439 - MIR SINE MIR -46 216 88 184 296 0 0 chr5 185697163 185697207 -13932943 + L2 LINE L2 3211 3254 -18 192 135 39 19 chr5 185697725 185697777 -13932373 + CT-rich Low_complexity Low_complexity 2 54 0 333 169 42 14 chr5 185698221 185698292 -13931858 + MIR SINE MIR 76 148 -60 636 260 14 102 chr5 185698812 185699097 -13931053 + MIR SINE MIR 3 262 0 322 290 110 69 chr5 185699619 185699665 -13930485 + L3 LINE CR1 1158 1201 -376 1991 133 0 20 chr5 185699665 185699959 -13930191 - AluSc SINE Alu -21 288 1 322 290 110 69 chr5 185699959 185700229 -13929921 + L3 LINE CR1 1201 1487 -90 672 241 0 0 chr5 185700830 185700975 -13929175 + MIR SINE MIR 15 159 -103 306 0 0 0 chr5 185700999 185701033 -13929117 + (CAA)n Simple_repeat Simple_repeat 2 35 0 1040 250 5 0 chr5 185701111 185701327 -13928823 - MER58A DNA MER1_type 0 224 8 257 239 109 51 chr5 185701503 185701641 -13928509 + MIR SINE MIR 109 254 -8 249 294 0 0 chr5 185702553 185702604 -13927546 - L2 LINE L2 -20 3252 3202 199 321 24 24 chr5 185702752 185702836 -13927314 - L2 LINE L2 -232 3040 2957 283 308 83 56 chr5 185703345 185703777 -13926373 - L2 LINE L2 -11 3302 2859 180 200 0 0 chr5 185703889 185703929 -13926221 + (TG)n Simple_repeat Simple_repeat 2 41 0 476 257 66 7 chr5 185703952 185704104 -13926046 - L2 LINE L2 -604 2710 2550 312 271 234 9 chr5 185704737 185704951 -13925199 - MIR SINE MIR 0 262 1 239 319 121 0 chr5 185705156 185705272 -13924878 - L2 LINE L2 -4 3268 3139 2464 81 0 0 chr5 185705288 185705585 -13924565 + AluSc SINE Alu 1 297 -12 1023 138 0 75 chr5 185705612 185705800 -13924350 + FAM SINE Alu 1 49 0 2233 89 31 3 chr5 185706290 185706583 -13923567 + AluSx SINE Alu 3 303 -9 597 245 38 33 chr5 185707373 185707585 -13922565 + MIR SINE MIR 20 232 -30 612 214 154 57 chr5 185707605 185707904 -13922246 - MER102a DNA MER1_type -1 329 2 278 254 0 14 chr5 185708601 185708672 -13921478 - L2 LINE L2 0 3313 3244 188 220 0 20 chr5 185708725 185708775 -13921375 + MIR SINE MIR 117 165 -97 24 32 0 0 chr5 185708924 185708955 -13921195 + AT_rich Low_complexity Low_complexity 1 31 0 779 174 0 8 chr5 185708974 185709106 -13921044 - FLAM_C SINE Alu -11 132 2 559 182 45 0 chr5 185709411 185709521 -13920629 - L2 LINE L2 -6 3307 3193 593 260 40 18 chr5 185709980 185710207 -13919943 - MIR SINE MIR 0 262 31 961 86 25 80 chr5 185710207 185710370 -13919780 + MER20 DNA MER1_type 1 154 -65 1183 121 0 0 chr5 185711176 185711341 -13918809 - AluSg/x SINE Alu -1 311 147 357 227 126 8 chr5 185711341 185711460 -13918690 - MIR SINE MIR -65 197 65 695 191 151 0 chr5 185711650 185711802 -13918348 - MER3 DNA MER1_type -1 208 34 227 278 143 53 chr5 185712000 185712133 -13918017 - MIR SINE MIR -78 184 40 24 0 0 0 chr5 185713602 185713626 -13916524 + AT_rich Low_complexity Low_complexity 1 24 0 222 62 0 0 chr5 185714683 185714715 -13915435 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 355 170 0 0 chr5 185714717 185714770 -13915380 - FLAM SINE Alu -18 115 63 226 50 50 0 chr5 185715076 185715116 -13915034 + (TG)n Simple_repeat Simple_repeat 1 42 0 224 260 28 14 chr5 185716405 185716489 -13913661 - MIR SINE MIR -65 143 67 296 238 71 48 chr5 185716826 185716952 -13913198 - L2 LINE L2 0 3313 3185 538 270 97 68 chr5 185717013 185717324 -13912826 + MER102a DNA MER1_type 11 330 0 310 318 12 0 chr5 185717860 185717945 -13912205 - MIR3 SINE MIR -46 162 77 405 0 0 0 chr5 185718032 185718077 -13912073 + (CA)n Simple_repeat Simple_repeat 2 46 0 211 146 24 0 chr5 185718077 185718118 -13912032 + GA-rich Low_complexity Low_complexity 1 42 0 708 202 244 0 chr5 185718934 185719127 -13911023 + MIR SINE MIR 2 241 -21 718 289 66 0 chr5 185719174 185719416 -13910734 - MIR SINE MIR 0 262 5 375 269 120 0 chr5 185720681 185720789 -13909361 - MER94 DNA DNA -2 132 12 338 274 121 0 chr5 185720800 185720957 -13909193 + L1ME LINE L1 5617 5792 -378 2160 113 11 0 chr5 185721109 185721393 -13908757 + AluSx SINE Alu 3 289 -23 278 296 56 9 chr5 185721675 185721783 -13908367 - MIR SINE MIR -76 132 20 440 292 43 38 chr5 185722495 185722704 -13907446 - MIR SINE MIR -51 211 2 356 219 164 31 chr5 185723985 185724113 -13906037 - MER103 DNA DNA 0 166 22 274 214 87 79 chr5 185725108 185725234 -13904916 - MIR SINE MIR -62 146 20 416 364 31 4 chr5 185725402 185725630 -13904520 - MIR SINE MIR -21 241 8 369 208 37 27 chr5 185725713 185725838 -13904312 + L1ME4a LINE L1 1222 6110 -7 243 0 0 0 chr5 185725964 185725991 -13904159 + (CA)n Simple_repeat Simple_repeat 1 27 0 285 226 98 29 chr5 185726062 185726164 -13903986 + MIR SINE MIR 84 192 -70 204 286 0 0 chr5 185727697 185727739 -13902411 + MIR3 SINE MIR 114 155 -53 1980 120 0 0 chr5 185727816 185728083 -13902067 + AluSg SINE Alu 39 305 -5 533 230 88 44 chr5 185728090 185728294 -13901856 + MIR SINE MIR 47 259 -3 407 271 117 123 chr5 185729236 185729772 -13900378 - L2 LINE L2 0 3313 2783 545 181 278 0 chr5 185729797 185729941 -13900209 - MER5A DNA MER1_type -5 184 1 2496 68 0 0 chr5 185730098 185730391 -13899759 - AluY SINE Alu -18 293 1 1789 159 48 0 chr5 185731930 185732047 -13898103 + AluJb SINE Alu 1 111 -201 180 0 0 0 chr5 185732047 185732067 -13898083 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1789 159 48 0 chr5 185732067 185732238 -13897912 + AluJb SINE Alu 111 303 -9 314 254 50 104 chr5 185732286 185732447 -13897703 + MER3 DNA MER1_type 2 152 -57 2109 103 3 7 chr5 185732447 185732765 -13897385 - AluSc SINE Alu 0 317 1 314 254 50 104 chr5 185732765 185732803 -13897347 + MER3 DNA MER1_type 152 191 -18 334 333 75 5 chr5 185734019 185734205 -13895945 + MIR SINE MIR 35 233 -29 627 249 77 18 chr5 185734408 185734629 -13895521 - L2 LINE L2 0 3313 3080 429 215 161 13 chr5 185735751 185735900 -13894250 - MER5B DNA MER1_type 0 178 8 451 335 19 5 chr5 185737037 185737249 -13892901 + MIR SINE MIR 47 261 -1 289 178 107 13 chr5 185738848 185738944 -13891206 - MIR SINE MIR -65 143 48 189 0 0 0 chr5 185739054 185739075 -13891075 + (T)n Simple_repeat Simple_repeat 1 21 0 813 208 15 55 chr5 185739567 185739769 -13890381 + MER58A DNA MER1_type 30 223 -1 406 291 85 16 chr5 185739795 185739984 -13890166 + MIR SINE MIR 47 248 -14 417 221 53 0 chr5 185740011 185740142 -13890008 - MIR SINE MIR -1 261 124 229 314 162 0 chr5 185740531 185740636 -13889514 - L2 LINE L2 0 3272 3151 195 129 0 0 chr5 185740684 185740715 -13889435 + (T)n Simple_repeat Simple_repeat 1 31 0 6355 135 70 3 chr5 185740761 185741368 -13888782 - Tigger3b DNA MER2_type -1797 1231 666 2496 80 0 3 chr5 185741368 185741679 -13888471 - AluY SINE Alu -1 310 1 6355 135 70 3 chr5 185741679 185742157 -13887993 - Tigger3b DNA MER2_type -2362 666 73 295 339 85 0 chr5 185742300 185742465 -13887685 - MIR SINE MIR -21 241 63 707 194 138 56 chr5 185742746 185742844 -13887306 + MER20 DNA MER1_type 8 97 -122 3766 112 31 0 chr5 185742844 185743353 -13886797 - MER1A DNA MER1_type 0 527 3 707 194 138 56 chr5 185743353 185743450 -13886700 + MER20 DNA MER1_type 97 219 0 221 294 29 0 chr5 185743472 185743540 -13886610 - L2 LINE L2 -69 3203 3134 1291 142 55 0 chr5 185743671 185743889 -13886261 - AluSp SINE Alu 0 313 84 338 299 130 29 chr5 185743930 185744238 -13885912 - L2 LINE L2 -344 2970 2632 190 271 150 30 chr5 185745344 185745477 -13884673 + MIR SINE MIR 111 259 -3 435 253 159 55 chr5 185745840 185746129 -13884021 + MER102a DNA MER1_type 4 322 -8 990 191 11 0 chr5 185746140 185746323 -13883827 + MER5A DNA MER1_type 1 185 -4 182 311 106 62 chr5 185746337 185746498 -13883652 + MIR3 SINE MIR 19 186 -22 344 267 107 13 chr5 185746503 185746662 -13883488 - MIR SINE MIR -2 260 88 332 245 118 10 chr5 185747051 185747153 -13882997 + MIR SINE MIR 85 197 -65 214 274 27 27 chr5 185747671 185747744 -13882406 + MIR SINE MIR 79 151 -111 484 289 21 32 chr5 185747924 185748114 -13882036 - MIR SINE MIR -13 249 62 297 109 0 0 chr5 185749028 185749074 -13881076 + (TTCA)n Simple_repeat Simple_repeat 2 47 0 580 308 100 25 chr5 185749080 185749479 -13880671 - L2 LINE L2 -20 3293 2865 501 282 111 9 chr5 185749503 185749719 -13880431 - MIR SINE MIR -24 238 1 441 229 68 52 chr5 185749828 185750020 -13880130 - MIR SINE MIR -12 250 56 416 193 193 90 chr5 185750641 185750853 -13879297 - L2 LINE L2 0 3313 3080 247 250 0 0 chr5 185750884 185750937 -13879213 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 220 308 0 0 chr5 185751029 185751081 -13879069 + polypyrimidine Low_complexity Low_complexity 2 53 0 1034 171 6 0 chr5 185751089 185751253 -13878897 - FRAM SINE Alu -12 164 1 236 272 151 42 chr5 185751668 185751907 -13878243 - L2 LINE L2 -4 3268 3004 693 223 132 5 chr5 185752649 185752869 -13877281 + MIR SINE MIR 14 261 -1 615 274 107 68 chr5 185753338 185753703 -13876447 + Charlie8 DNA MER1_type 13 391 -2026 569 296 18 22 chr5 185754201 185754427 -13875723 - MIR SINE MIR -36 226 2 201 250 0 0 chr5 185755304 185755352 -13874798 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 2290 94 0 36 chr5 185755517 185755824 -13874326 + AluSg SINE Alu 1 296 -14 251 296 40 92 chr5 185755829 185755981 -13874169 + MIR3 SINE MIR 19 162 -46 493 275 190 0 chr5 185756274 185756485 -13873665 + MIR SINE MIR 5 255 -7 256 341 12 0 chr5 185757034 185757119 -13873031 - MIR3 SINE MIR -30 178 93 188 200 0 0 chr5 185757807 185757842 -13872308 - L2 LINE L2 -14 3258 3224 225 233 0 0 chr5 185757859 185757902 -13872248 + GA-rich Low_complexity Low_complexity 4 46 0 352 300 22 8 chr5 185758121 185758259 -13871891 + MIR SINE MIR 36 173 -63 514 294 31 0 chr5 185758524 185758684 -13871466 + MIR3 SINE MIR 19 183 -25 180 304 0 0 chr5 185758923 185758979 -13871171 + L3b LINE CR1 1333 1388 -195 268 206 247 0 chr5 185759585 185759682 -13870468 + L2 LINE L2 3193 3313 0 634 300 0 0 chr5 185759713 185759897 -13870253 + MIR SINE MIR 74 256 -6 327 240 52 10 chr5 185759929 185760025 -13870125 - MIR SINE MIR -79 183 84 1969 95 85 11 chr5 185761586 185761869 -13868281 + AluSc SINE Alu 1 304 -5 426 339 35 20 chr5 185761907 185762161 -13867989 + L3 LINE CR1 1306 1563 -14 1011 201 81 40 chr5 185763154 185763408 -13866742 + Tigger7 DNA MER2_type 3 2422 -69 233 265 60 12 chr5 185763426 185763509 -13866641 + Tigger7 DNA MER2_type 2401 2487 0 207 225 0 0 chr5 185763767 185763838 -13866312 + (AATTG)n Simple_repeat Simple_repeat 1 71 0 448 252 47 47 chr5 185763951 185764165 -13865985 - L2 LINE L2 -5 3308 3095 2381 105 0 3 chr5 185764171 185764484 -13865666 + AluSx SINE Alu 1 312 0 630 258 110 56 chr5 185764599 185765025 -13865125 - L2 LINE L2 -578 2736 2288 740 232 28 0 chr5 185766269 185766450 -13863700 - MER5A DNA MER1_type -3 186 1 477 333 22 18 chr5 185767163 185767385 -13862765 + MIR SINE MIR 33 255 -7 220 278 19 0 chr5 185767428 185767482 -13862668 + L2 LINE L2 3133 3187 -85 250 258 0 0 chr5 185767498 185767560 -13862590 - L2 LINE L2 0 3272 3211 439 205 0 0 chr5 185767737 185767840 -13862310 - MER5A DNA MER1_type -83 106 4 248 268 4 18 chr5 185767891 185767969 -13862181 - MIR SINE MIR -74 134 60 285 238 16 0 chr5 185768015 185768078 -13862072 + MER5B DNA MER1_type 1 64 -114 207 167 0 0 chr5 185768092 185768128 -13862022 - MER5B DNA MER1_type -139 39 4 522 287 107 0 chr5 185768207 185768357 -13861793 - MIR3 SINE MIR -9 199 34 210 209 173 45 chr5 185769083 185769193 -13860957 - MIR3 SINE MIR -48 160 37 359 229 0 76 chr5 185769486 185769604 -13860546 - L2 LINE L2 0 3313 3205 728 268 75 83 chr5 185769842 185770563 -13859587 - L2 LINE L2 -341 2973 2259 242 250 223 27 chr5 185770841 185770953 -13859197 - L2 LINE L2 -20 3252 3119 1468 202 4 4 chr5 185771375 185771637 -13858513 + AluJb SINE Alu 34 295 -17 2259 124 0 0 chr5 185771638 185771945 -13858205 + AluSx SINE Alu 1 307 -5 243 167 150 0 chr5 185772134 185772179 -13857971 - MER102a DNA MER1_type -17 313 260 333 122 20 0 chr5 185772179 185772228 -13857922 + MER81 DNA DNA 1 50 -64 589 323 10 5 chr5 185772325 185772517 -13857633 - MER102a DNA MER1_type -137 193 1 221 245 0 0 chr5 185773009 185773062 -13857088 + MIR SINE MIR 85 137 -71 643 286 11 17 chr5 185774419 185774594 -13855556 - MER117 DNA MER1_type -18 179 6 927 225 53 5 chr5 185774803 185775012 -13855138 - MER20 DNA MER1_type 0 219 1 784 29 19 0 chr5 185775014 185775117 -13855033 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 201 298 0 0 chr5 185775166 185775223 -13854927 + L2 LINE L2 3255 3311 -2 396 286 58 16 chr5 185775889 185776078 -13854072 - MIR SINE MIR -19 243 47 204 250 0 0 chr5 185776319 185776383 -13853767 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 234 187 99 117 chr5 185776384 185776555 -13853595 + HAL1b LINE L1 1165 1332 -16 327 294 92 18 chr5 185776620 185776783 -13853367 + MIR SINE MIR 86 260 -2 1037 266 82 48 chr5 185777827 185778396 -13851754 + L2 LINE L2 2733 3313 0 188 319 32 11 chr5 185778602 185778696 -13851454 - L2 LINE L2 -7 3306 3211 268 367 47 18 chr5 185778730 185778899 -13851251 + MIR SINE MIR 18 191 -71 682 235 84 1 chr5 185779929 185780131 -13850019 - MIR SINE MIR -44 218 1 197 317 37 0 chr5 185780132 185780214 -13849936 + L2 LINE L2 3190 3274 -39 195 42 0 0 chr5 185780845 185780869 -13849281 + (TG)n Simple_repeat Simple_repeat 1 24 0 249 180 0 0 chr5 185783054 185783104 -13847046 + (CA)n Simple_repeat Simple_repeat 2 51 0 260 321 12 12 chr5 185783474 185783558 -13846592 + MER45 DNA AcHobo 2 85 -1496 268 266 16 0 chr5 185783563 185783627 -13846523 + MER45 DNA AcHobo 1517 1581 0 1594 123 63 4 chr5 185783820 185784073 -13846077 + Tigger1 DNA MER2_type 1 268 -2150 2389 116 13 42 chr5 185784082 185784463 -13845687 + Tigger1 DNA MER2_type 2049 2418 0 227 217 29 43 chr5 185785391 185785460 -13844690 + L2 LINE L2 3203 3270 -2 559 252 138 14 chr5 185785790 185786008 -13844142 + MIR SINE MIR 18 262 0 356 315 48 6 chr5 185786844 185787009 -13843141 - MIR SINE MIR -1 261 90 2017 114 48 0 chr5 185787388 185787678 -13842472 - AluSc SINE Alu -5 304 1 474 18 0 0 chr5 185787824 185787879 -13842271 + (TG)n Simple_repeat Simple_repeat 1 55 0 41 21 0 0 chr5 185788679 185788727 -13841423 + AT_rich Low_complexity Low_complexity 1 48 0 542 232 92 0 chr5 185788733 185788875 -13841275 + MER103 DNA DNA 6 160 -6 1429 283 58 39 chr5 185789414 185789983 -13840167 - MLT1K LTR MaLR -6 582 3 498 221 111 58 chr5 185790323 185790531 -13839619 + MIR SINE MIR 29 247 -15 525 282 31 10 chr5 185790737 185790932 -13839218 - MIR SINE MIR -1 261 63 182 37 37 0 chr5 185790963 185790990 -13839160 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1961 108 4 0 chr5 185790992 185791252 -13838898 - AluSp SINE Alu -17 296 36 221 191 24 0 chr5 185791278 185791320 -13838830 - MIR SINE MIR -89 119 77 659 247 12 6 chr5 185792161 185792331 -13837819 + MIR SINE MIR 92 262 0 2257 132 0 0 chr5 185792564 185792874 -13837276 - AluSx SINE Alu -2 310 1 269 249 183 41 chr5 185793427 185793624 -13836526 - MIR SINE MIR 0 262 38 480 291 45 15 chr5 185794228 185794427 -13835723 + MIR SINE MIR 15 219 -43 197 305 74 42 chr5 185794539 185794634 -13835516 + MIR SINE MIR 14 111 -151 2344 78 3 0 chr5 185794955 185795238 -13834912 - AluSg SINE Alu -26 284 1 281 313 30 30 chr5 185795889 185796023 -13834127 - MIR SINE MIR -80 182 49 243 0 0 0 chr5 185796025 185796052 -13834098 + (TG)n Simple_repeat Simple_repeat 2 28 0 483 297 33 28 chr5 185796233 185796415 -13833735 + LTR16C LTR ERVL 97 279 -212 623 223 28 107 chr5 185796425 185796716 -13833434 - L2 LINE L2 -819 2495 2228 2102 137 7 0 chr5 185797498 185797804 -13832346 - AluSx SINE Alu -4 308 1 553 296 27 18 chr5 185797866 185798086 -13832064 + L1MC4a LINE L1 5677 5898 -1910 8213 55 9 0 chr5 185799353 185800310 -13829840 - LTR5 LTR ERVK -3 966 1 233 314 17 17 chr5 185800338 185800456 -13829694 + MIR SINE MIR 59 176 -86 265 304 51 65 chr5 185800512 185800729 -13829421 + L2 LINE L2 3011 3224 -89 188 158 0 0 chr5 185800768 185800806 -13829344 - L2 LINE L2 -226 3046 3009 252 366 11 42 chr5 185800999 185801190 -13828960 - MIR SINE MIR -50 212 28 815 216 27 5 chr5 185801712 185801897 -13828253 + MIR SINE MIR 73 261 -1 338 311 64 26 chr5 185802784 185802963 -13827187 - MIR SINE MIR -63 145 5 691 288 9 5 chr5 185803916 185804128 -13826022 + MIR SINE MIR 2 214 -48 209 341 47 23 chr5 185804139 185804268 -13825882 - L2 LINE L2 -4 3268 3137 348 253 69 16 chr5 185804407 185804532 -13825618 - MIR SINE MIR -62 146 59 810 241 57 124 chr5 185804533 185804892 -13825258 + L1MC4a LINE L1 5565 5897 -235 297 333 23 8 chr5 185805126 185805255 -13824895 + MIR3 SINE MIR 77 207 -1 230 303 76 50 chr5 185805461 185805580 -13824570 - L2 LINE L2 -12 3301 3180 537 304 49 36 chr5 185805628 185805875 -13824275 - MIR SINE MIR -12 250 1 907 130 21 73 chr5 185806540 185806732 -13823418 + L1MB7 LINE L1 5650 5831 -353 * 2136 52 3 0 chr5 185806690 185806971 -13823179 - L1ME LINE L1 -549 5617 5333 408 0 0 0 chr5 185806969 185807013 -13823137 + L1P1 LINE L1 5569 5612 -543 * 5326 10 0 0 chr5 185806971 185807556 -13822594 + L1PA2 LINE L1 5569 6155 0 886 164 7 0 chr5 185807556 185807708 -13822442 + L1MB7 LINE L1 5821 5973 -211 351 271 90 49 chr5 185807796 185807940 -13822210 - L2 LINE L2 -12 3260 3111 191 233 23 0 chr5 185807963 185808006 -13822144 - L2 LINE L2 -18 3254 3211 829 156 72 0 chr5 185808050 185808230 -13821920 + L1MB7 LINE L1 5992 6184 0 370 269 47 74 chr5 185808724 185808790 -13821360 - L2 LINE L2 -540 2774 2708 1643 95 0 0 chr5 185808790 185809011 -13821139 - AluSg/x SINE Alu -14 298 78 370 269 47 74 chr5 185809011 185809093 -13821057 - L2 LINE L2 -606 2708 2630 393 238 41 25 chr5 185809166 185809288 -13820862 + L2 LINE L2 3186 3309 -4 385 241 145 48 chr5 185809306 185809513 -13820637 + MIR SINE MIR 10 236 -26 197 356 104 22 chr5 185809908 185810043 -13820107 - MIR SINE MIR 0 262 117 909 184 48 0 chr5 185810277 185810445 -13819705 - MER5A DNA MER1_type -12 177 2 300 27 0 0 chr5 185810666 185810703 -13819447 + (CAA)n Simple_repeat Simple_repeat 3 39 0 323 229 114 38 chr5 185811799 185811904 -13818246 - MIR SINE MIR -73 189 77 655 97 42 15 chr5 185812641 185812750 -13817400 - MER20 DNA MER1_type -94 125 16 * 696 301 17 92 chr5 185812747 185813159 -13816991 - Charlie8 DNA MER1_type -1978 439 59 317 167 91 15 chr5 185813487 185813553 -13816597 - MIR3 SINE MIR -6 202 132 406 263 108 7 chr5 185813731 185813880 -13816270 - MIR3 SINE MIR -25 183 12 230 241 185 46 chr5 185813937 185814045 -13816105 - LTR67 LTR ERVL -3 554 432 292 250 70 20 chr5 185814286 185814386 -13815764 + MLT1J LTR MaLR 235 339 -172 382 270 13 86 chr5 185814485 185814637 -13815513 - MIR3 SINE MIR -45 163 23 206 116 23 0 chr5 185814902 185814945 -13815205 + (CAT)n Simple_repeat Simple_repeat 1 44 0 2219 168 53 65 chr5 185815783 185816276 -13813874 + MLT1D LTR MaLR 19 505 0 233 286 13 39 chr5 185816284 185816361 -13813789 - L2 LINE L2 -35 3278 3204 432 56 15 18 chr5 185816726 185816788 -13813362 + MLT1D LTR MaLR 1 72 -433 * 725 199 154 25 chr5 185816786 185817082 -13813068 - MER33 DNA MER1_type -5 358 1 656 296 68 0 chr5 185817658 185817864 -13812286 - MIR SINE MIR -7 255 36 210 37 0 0 chr5 185818039 185818066 -13812084 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 799 165 0 12 chr5 185818258 185818422 -13811728 + CT-rich Low_complexity Low_complexity 2 163 0 864 260 8 50 chr5 185820058 185820300 -13809850 - MIR SINE MIR -29 233 2 245 323 86 112 chr5 185820448 185820913 -13809237 - L2 LINE L2 0 3272 2820 333 243 0 14 chr5 185821258 185821332 -13808818 + MIR SINE MIR 190 262 0 198 71 0 0 chr5 185822923 185822951 -13807199 + (ATG)n Simple_repeat Simple_repeat 3 30 0 542 316 8 60 chr5 185822957 185823191 -13806959 - MIR SINE MIR -18 244 23 406 280 147 0 chr5 185823316 185823459 -13806691 - MER103 DNA DNA -1 165 2 353 327 60 27 chr5 185825194 185825344 -13804806 + L2 LINE L2 3118 3272 0 275 238 16 0 chr5 185825720 185825783 -13804367 + L2 LINE L2 3250 3313 0 224 280 0 0 chr5 185825883 185825933 -13804217 - L2 LINE L2 -3 3269 3220 415 270 30 0 chr5 185825933 185826033 -13804117 + MIR SINE MIR 45 147 -115 304 80 0 40 chr5 185826834 185826884 -13803266 - Alu SINE Alu 0 308 261 353 216 40 0 chr5 185826893 185826967 -13803183 + MIR SINE MIR 116 192 -70 641 299 56 21 chr5 185827015 185827249 -13802901 - MIR SINE MIR -8 254 13 380 312 55 50 chr5 185827597 185827705 -13802445 - MIR SINE MIR -21 241 130 1305 188 0 0 chr5 185827705 185827928 -13802222 + MER58A DNA MER1_type 2 224 0 380 312 55 50 chr5 185827928 185828018 -13802132 - MIR SINE MIR -132 130 42 749 67 0 9 chr5 185828235 185828340 -13801810 + (TTCC)n Simple_repeat Simple_repeat 1 104 0 261 351 152 0 chr5 185828362 185828527 -13801623 + L2 LINE L2 2866 3055 -217 709 270 142 0 chr5 185828680 185828906 -13801244 - L2 LINE L2 -1736 1578 1321 383 314 79 63 chr5 185829195 185829510 -13800640 - L2 LINE L2 -5 3308 2989 1385 47 0 0 chr5 185829593 185829763 -13800387 - AluYb8 SINE Alu -13 305 136 486 241 91 37 chr5 185829763 185829950 -13800200 - MIR SINE MIR -53 209 13 688 268 63 5 chr5 185830006 185830196 -13799954 + MIR SINE MIR 30 230 -32 855 214 99 12 chr5 185830205 185830448 -13799702 - MER33 DNA MER1_type 0 324 61 215 108 15 92 chr5 185831086 185831151 -13798999 + (TTTTTG)n Simple_repeat Simple_repeat 2 61 0 285 243 313 14 chr5 185831287 185831431 -13798719 - MIR SINE MIR -56 206 20 990 278 129 59 chr5 185831568 185832058 -13798092 + L2 LINE L2 1563 2086 -1228 213 274 170 9 chr5 185832642 185832748 -13797402 - L2 LINE L2 -225 3047 2925 188 283 133 0 chr5 185833125 185833185 -13796965 + L3 LINE CR1 1380 1447 -130 346 287 32 0 chr5 185834117 185834211 -13795939 + MLT1K LTR MaLR 175 271 -317 1315 157 85 112 chr5 185834234 185834632 -13795518 + MLT1A2 LTR MaLR 1 374 0 306 253 120 40 chr5 185834706 185834856 -13795294 + MLT1K LTR MaLR 411 572 -16 2128 127 0 0 chr5 185834857 185835164 -13794986 - AluSx SINE Alu -5 307 1 732 301 73 29 chr5 185835183 185835429 -13794721 + MIR SINE MIR 2 258 -4 1847 138 21 0 chr5 185835718 185835842 -13794308 + AluSx SINE Alu 1 121 -191 210 37 0 0 chr5 185835842 185835869 -13794281 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1847 138 21 0 chr5 185835869 185836033 -13794117 + AluSx SINE Alu 121 295 -17 302 278 73 33 chr5 185836061 185836212 -13793938 + MER103 DNA DNA 3 159 -7 5448 70 40 49 chr5 185838648 185839521 -13790629 + SVA Other Other 2 866 -520 6553 61 7 39 chr5 185839540 185840824 -13789326 + SVA Other Other 432 1416 0 296 264 148 58 chr5 185841040 185841317 -13788833 + L2 LINE L2 2967 3268 -4 970 171 6 0 chr5 185841732 185841896 -13788254 + FRAM SINE Alu 1 164 -12 220 308 0 0 chr5 185841904 185841956 -13788194 + polypurine Low_complexity Low_complexity 2 53 0 247 250 0 0 chr5 185841999 185842100 -13788050 + (TGGA)n Simple_repeat Simple_repeat 1 101 0 504 193 193 90 chr5 185842132 185842344 -13787806 + L2 LINE L2 3080 3313 0 181 98 49 0 chr5 185842652 185842693 -13787457 + (TATG)n Simple_repeat Simple_repeat 1 43 0 520 249 91 45 chr5 185842936 185843157 -13786993 + MIR SINE MIR 20 250 -12 587 282 111 9 chr5 185843266 185843482 -13786668 + MIR SINE MIR 1 238 -24 728 308 100 25 chr5 185843506 185843905 -13786245 + L2 LINE L2 2865 3293 -20 297 109 0 0 chr5 185843911 185843957 -13786193 + (TGAA)n Simple_repeat Simple_repeat 2 47 0 568 304 20 30 chr5 185844871 185845072 -13785078 + MIR SINE MIR 62 260 -2 272 279 81 23 chr5 185845241 185845327 -13784823 - MIR SINE MIR -111 151 61 387 271 157 7 chr5 185845817 185845957 -13784193 - MIR SINE MIR -46 216 56 410 267 107 13 chr5 185846323 185846482 -13783668 + MIR SINE MIR 88 260 -2 237 311 106 62 chr5 185846487 185846648 -13783502 - MIR3 SINE MIR -22 186 19 988 197 11 0 chr5 185846662 185846845 -13783305 - MER5A DNA MER1_type -4 185 1 442 253 159 55 chr5 185846856 185847145 -13783005 - MER102a DNA MER1_type -8 322 4 256 271 150 30 chr5 185847508 185847641 -13782509 - MIR SINE MIR -3 259 111 418 292 130 29 chr5 185848747 185849055 -13781095 + L2 LINE L2 2632 2970 -344 1212 142 55 0 chr5 185849096 185849314 -13780836 + AluSp SINE Alu 84 313 0 243 294 29 0 chr5 185849445 185849513 -13780637 + L2 LINE L2 3134 3203 -69 710 194 138 56 chr5 185849535 185849632 -13780518 - MER20 DNA MER1_type 0 219 131 3770 112 31 0 chr5 185849632 185850141 -13780009 + MER1A DNA MER1_type 3 527 0 710 194 138 56 chr5 185850141 185850239 -13779911 - MER20 DNA MER1_type -88 131 8 361 350 75 0 chr5 185850520 185850706 -13779444 + MIR SINE MIR 63 262 0 6293 137 98 3 chr5 185850802 185851306 -13778844 + Tigger3b DNA MER2_type 14 469 -2559 2357 80 0 3 chr5 185851306 185851617 -13778533 + AluY SINE Alu 1 310 -1 6293 137 98 3 chr5 185851617 185852224 -13777926 + Tigger3b DNA MER2_type 469 1231 0 195 129 0 0 chr5 185852270 185852301 -13777849 + (A)n Simple_repeat Simple_repeat 1 31 0 267 330 148 0 chr5 185852339 185852454 -13777696 + L2 LINE L2 3141 3272 0 513 232 22 14 chr5 185852843 185852981 -13777169 + MIR SINE MIR 124 262 0 180 280 0 20 chr5 185852984 185853034 -13777116 - L2 LINE L2 -1 3271 3223 * 487 293 91 16 chr5 185853004 185853218 -13776932 - MIR SINE MIR -14 248 22 811 208 15 55 chr5 185853219 185853421 -13776729 - MER58A DNA MER1_type -1 223 30 216 0 0 0 chr5 185853913 185853937 -13776213 + (A)n Simple_repeat Simple_repeat 1 24 0 324 177 112 13 chr5 185854044 185854143 -13776007 + MIR SINE MIR 44 143 -65 581 311 24 9 chr5 185855755 185855967 -13774183 - MIR SINE MIR -1 261 47 496 215 161 13 chr5 185857104 185857253 -13772897 + MER5B DNA MER1_type 8 178 0 734 250 76 18 chr5 185858373 185858597 -13771553 + L2 LINE L2 3077 3313 0 409 333 75 5 chr5 185858800 185858986 -13771164 - MIR SINE MIR -29 233 35 1695 96 4 8 chr5 185860240 185860480 -13769670 + AluSc SINE Alu 1 239 -70 694 279 137 8 chr5 185860671 185860933 -13769217 - MLT1K LTR MaLR -1 587 292 371 380 43 30 chr5 185861203 185861574 -13768576 + L2 LINE L2 2897 3272 0 245 300 8 54 chr5 185862150 185862280 -13767870 - MIR SINE MIR -115 147 24 2965 151 107 118 chr5 185862342 185863182 -13766968 - L1MB8 LINE L1 -2 6176 5346 537 274 166 0 chr5 185863187 185863362 -13766788 + MIR SINE MIR 49 252 -10 351 215 13 0 chr5 185864157 185864236 -13765914 + MIR SINE MIR 104 183 -79 1045 161 32 16 chr5 185864263 185864449 -13765701 - MER46A DNA MER2_type 0 236 48 229 254 82 49 chr5 185864457 185864579 -13765571 - L3 LINE CR1 -273 1304 1179 351 335 151 7 chr5 185864656 185864808 -13765342 - MER91A DNA MER1_type -20 176 3 237 244 58 12 chr5 185865298 185865384 -13764766 + MIR SINE MIR 173 262 0 478 233 0 0 chr5 185865627 185865730 -13764420 + MER5A DNA MER1_type 7 109 -80 2468 56 0 0 chr5 185865794 185866098 -13764052 - AluY SINE Alu -7 304 1 671 209 52 41 chr5 185866099 185866271 -13763879 - MER5B DNA MER1_type 0 178 5 463 307 80 6 chr5 185866913 185867089 -13763061 + MIR SINE MIR 72 260 -2 217 350 43 17 chr5 185867106 185867223 -13762927 + L2 LINE L2 3137 3256 -16 44 56 0 0 chr5 185867225 185867297 -13762853 + AT_rich Low_complexity Low_complexity 1 72 0 494 259 218 20 chr5 185867478 185867675 -13762475 + MIR SINE MIR 21 256 -6 732 277 72 52 chr5 185867692 185868139 -13762011 - L1ME4a LINE L1 -218 5903 5448 300 289 78 35 chr5 185868554 185868696 -13761454 + MIR SINE MIR 13 160 -102 447 289 72 18 chr5 185868729 185868895 -13761255 + MIR SINE MIR 1 175 -87 235 361 19 0 chr5 185869604 185869712 -13760438 + MIR3 SINE MIR 15 124 -84 247 384 14 7 chr5 185870496 185870634 -13759516 + L2 LINE L2 2720 2858 -456 37 76 0 0 chr5 185870995 185871074 -13759076 + AT_rich Low_complexity Low_complexity 1 79 0 353 189 63 36 chr5 185871260 185871371 -13758779 - L1ME4a LINE L1 -295 5826 5713 2286 88 3 0 chr5 185871386 185871691 -13758459 - AluSq SINE Alu -7 306 1 357 286 112 28 chr5 185871984 185872142 -13758008 + MIR SINE MIR 25 205 -57 787 265 15 5 chr5 185872303 185872507 -13757643 + Charlie8 DNA MER1_type 38 243 -2174 281 279 115 55 chr5 185873313 185873496 -13756654 + L2 LINE L2 3120 3313 0 390 192 26 0 chr5 185874147 185874225 -13755925 - MIR SINE MIR -90 172 93 338 373 21 0 chr5 185874719 185874861 -13755289 + MIR SINE MIR 102 246 -16 973 266 172 33 chr5 185876159 185876903 -13753247 + L2 LINE L2 2476 3296 -17 377 336 108 22 chr5 185877131 185877354 -13752796 + MIR SINE MIR 14 255 -7 192 377 14 0 chr5 185877830 185877899 -13752251 - L2 LINE L2 -82 3190 3121 191 347 0 42 chr5 185878232 185878327 -13751823 + L2 LINE L2 3161 3251 -21 212 302 47 19 chr5 185878335 185878441 -13751709 - MIR3 SINE MIR -85 123 15 21 57 0 0 chr5 185879052 185879087 -13751063 + AT_rich Low_complexity Low_complexity 1 35 0 314 279 93 36 chr5 185879157 185879297 -13750853 + MIR3 SINE MIR 2 149 -59 295 306 42 14 chr5 185879373 185879517 -13750633 + MIR SINE MIR 20 167 -95 321 296 106 48 chr5 185880104 185880293 -13749857 - MIR SINE MIR 0 262 63 189 238 0 24 chr5 185880633 185880675 -13749475 - MIR3 SINE MIR -33 175 135 2221 95 7 0 chr5 185881364 185881660 -13748490 + AluSc SINE Alu 3 300 -9 189 0 0 0 chr5 185882132 185882153 -13747997 + (TC)n Simple_repeat Simple_repeat 2 22 0 1814 317 68 30 chr5 185882454 185882865 -13747285 - HERVL LTR ERVL -327 5345 4951 2621 161 30 15 chr5 185882865 185883325 -13746825 + MLT1C LTR MaLR 1 467 0 1814 317 68 30 chr5 185883325 185884392 -13745758 - HERVL LTR ERVL -721 4951 3794 2125 335 66 31 chr5 185884463 185885098 -13745052 - HERVL LTR ERVL -2121 3643 3031 2089 133 0 3 chr5 185885098 185885399 -13744751 + AluSx SINE Alu 1 300 -12 2125 335 66 31 chr5 185885399 185886036 -13744114 - HERVL LTR ERVL -2733 3031 2327 743 332 30 20 chr5 185886143 185886444 -13743706 - HERVL LTR ERVL -2940 2056 1753 1822 187 41 56 chr5 185886811 185887306 -13742844 - MLT1C LTR MaLR -2 503 1 293 345 78 45 chr5 185887341 185887698 -13742452 - HERVL LTR ERVL -3743 1253 885 1549 208 54 54 chr5 185888171 185888618 -13741532 + MLT1D LTR MaLR 1 447 -58 276 30 0 0 chr5 185889064 185889097 -13741053 + (CA)n Simple_repeat Simple_repeat 2 34 0 420 229 66 83 chr5 185889186 185889367 -13740783 - HsTC2 DNA Tc2 0 1898 3 328 173 0 74 chr5 185890138 185890219 -13739931 + L3 LINE CR1 1415 1489 -88 2271 184 40 42 chr5 185890243 185890418 -13739732 - Charlie1b DNA MER1_type -2238 523 349 1901 137 3 26 chr5 185890418 185890731 -13739419 + AluJb SINE Alu 3 308 -4 2271 184 40 42 chr5 185890731 185891078 -13739072 - Charlie1b DNA MER1_type -2412 349 2 444 270 104 25 chr5 185891350 185891448 -13738702 - MER5B DNA MER1_type -2 176 58 2035 78 0 4 chr5 185891448 185891719 -13738431 - AluSc SINE Alu -39 270 1 444 270 104 25 chr5 185891719 185891783 -13738367 - MER5B DNA MER1_type -120 58 1 1278 162 19 5 chr5 185891870 185892086 -13738064 - MER20 DNA MER1_type 0 219 1 293 222 34 103 chr5 185892968 185893085 -13737065 + L2 LINE L2 3191 3299 -14 399 345 85 50 chr5 185893157 185893534 -13736616 - L2 LINE L2 0 3272 2883 722 326 31 34 chr5 185893542 185894082 -13736068 + L2 LINE L2 2764 3307 -6 253 250 13 13 chr5 185894089 185894165 -13735985 + GA-rich Low_complexity Low_complexity 4 79 0 501 287 30 24 chr5 185894825 185894992 -13735158 - MIR SINE MIR -74 188 21 699 267 91 5 chr5 185895034 185895221 -13734929 - MIR SINE MIR -14 248 46 1312 217 107 3 chr5 185895577 185895886 -13734264 - MER58B DNA MER1_type 0 341 1 334 316 90 0 chr5 185896802 185896935 -13733215 - MER117 DNA MER1_type -44 153 9 362 269 221 7 chr5 185896946 185897095 -13733055 - MER5A DNA MER1_type 0 189 9 321 327 47 0 chr5 185897104 185897211 -13732939 + MIR SINE MIR 10 121 -141 225 321 0 0 chr5 185900361 185900417 -13729733 - MIR SINE MIR -65 143 88 183 80 0 0 chr5 185900581 185900606 -13729544 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 771 247 240 10 chr5 185900610 185901089 -13729061 - L2 LINE L2 -15 3298 2699 558 215 25 25 chr5 185901273 185901394 -13728756 - MIR SINE MIR -56 206 86 355 271 37 9 chr5 185901572 185901679 -13728471 - MIR SINE MIR -36 226 117 450 310 0 8 chr5 185901927 185902056 -13728094 + L2 LINE L2 3186 3313 0 293 289 106 42 chr5 185902502 185902644 -13727506 + MIR3 SINE MIR 21 171 -37 212 271 0 34 chr5 185902617 185902676 -13727474 - MIR3 SINE MIR 0 208 152 * 268 300 111 0 chr5 185902869 185902959 -13727191 - MIR3 SINE MIR -49 159 60 2244 100 0 0 chr5 185903062 185903361 -13726789 + AluSg SINE Alu 5 303 -7 198 239 239 0 chr5 185903472 185903539 -13726611 - MIR SINE MIR -67 195 113 369 188 0 0 chr5 185904357 185904437 -13725713 + (TG)n Simple_repeat Simple_repeat 2 81 0 271 175 35 0 chr5 185904437 185904494 -13725656 - HERVFH21 LTR ERV1 -6453 76 18 352 353 60 31 chr5 185904596 185904913 -13725237 + L1M3d LINE L1 8 333 -5558 10170 246 29 8 chr5 185904956 185907048 -13723102 + L1M3de LINE L1 835 2970 -4516 1611 268 58 18 chr5 185907072 185907778 -13722372 + L1M3de LINE L1 2908 3641 -3924 1057 149 11 43 chr5 185907782 185907970 -13722180 - THE1B LTR MaLR 0 364 183 183 156 0 0 chr5 185908084 185908116 -13722034 + CT-rich Low_complexity Low_complexity 1 32 0 2031 73 4 8 chr5 185908511 185908770 -13721380 - AluY SINE Alu -13 298 41 1786 226 26 30 chr5 185908770 185909235 -13720915 + L1M3de LINE L1 3721 4183 -3382 1221 185 37 5 chr5 185909263 185909479 -13720671 + MER58A DNA MER1_type 1 223 -1 842 219 11 6 chr5 185911297 185911475 -13718675 - MER5A DNA MER1_type -5 184 6 289 257 9 38 chr5 185912364 185912469 -13717681 + CT-rich Low_complexity Low_complexity 2 103 0 248 299 140 9 chr5 185913781 185913888 -13716262 - L2 LINE L2 -1 3312 3192 303 256 101 16 chr5 185914129 185914258 -13715892 - L1ME3A LINE L1 0 6170 6031 1099 266 20 42 chr5 185914366 185914769 -13715381 - L1ME3A LINE L1 -208 5962 5569 * 2212 218 88 28 chr5 185914763 185916101 -13714049 - L1ME3 LINE L1 -195 5967 4556 820 264 60 8 chr5 185916331 185916733 -13713417 - L1ME3 LINE L1 -2789 3357 2933 313 266 62 47 chr5 185916733 185916861 -13713289 - HAL1 LINE L1 -1471 1036 907 457 254 37 32 chr5 185916861 185917050 -13713100 - HAL1 LINE L1 -1554 953 764 723 308 58 23 chr5 185917110 185917503 -13712647 - HAL1 LINE L1 -1832 675 269 600 310 57 16 chr5 185918926 185919171 -13710979 - MIR SINE MIR 0 262 8 435 245 20 20 chr5 185919242 185919344 -13710806 - MIR3 SINE MIR -11 197 96 1193 282 80 72 chr5 185919441 185920125 -13710025 - MER21B LTR ERV1 -150 713 24 190 267 93 56 chr5 185920569 185920730 -13709420 - MIR SINE MIR -81 181 15 220 196 43 0 chr5 185920999 185921045 -13709105 + MER91B DNA MER1_type 15 62 -128 432 301 87 36 chr5 185921089 185921308 -13708842 - MIR SINE MIR -21 241 12 233 279 8 74 chr5 185921861 185921983 -13708167 - MIR SINE MIR -124 138 25 383 232 20 50 chr5 185922496 185922595 -13707555 - MER91C DNA MER1_type -39 101 6 281 196 49 59 chr5 185923471 185923573 -13706577 - L2 LINE L2 -32 3240 3140 510 319 33 0 chr5 185923598 185923808 -13706342 - MIR SINE MIR -33 229 13 215 260 240 26 chr5 185925048 185925202 -13704948 - MIR SINE MIR -3 259 73 22 35 0 0 chr5 185925824 185925853 -13704297 + AT_rich Low_complexity Low_complexity 1 29 0 705 309 74 0 chr5 185926703 185926946 -13703204 - MIR SINE MIR -1 261 1 279 304 54 27 chr5 185927398 185927510 -13702640 - HERV16 LTR ERVL -4860 136 22 470 297 166 0 chr5 185927564 185927709 -13702441 + MER5A DNA MER1_type 9 177 -12 2265 111 10 0 chr5 185927718 185928016 -13702134 + AluSc SINE Alu 1 301 -8 2018 107 10 41 chr5 185928032 185928322 -13701828 + AluSq SINE Alu 21 301 -12 268 268 49 0 chr5 185929199 185929281 -13700869 + MIR SINE MIR 84 170 -38 267 287 115 35 chr5 185929752 185929839 -13700311 - L2 LINE L2 -13 3259 3166 197 288 88 71 chr5 185931362 185931702 -13698448 - L2 LINE L2 -86 3186 2841 620 267 31 20 chr5 185931768 185931963 -13698187 - MIR SINE MIR -9 253 57 241 235 80 63 chr5 185932085 185932197 -13697953 + MER5A DNA MER1_type 65 177 -1 * 260 315 14 0 chr5 185932197 185932245 -13697905 - MIR3 SINE MIR -51 157 109 198 167 0 0 chr5 185932339 185932375 -13697775 + G-rich Low_complexity Low_complexity 3 38 0 672 263 42 46 chr5 185932395 185932484 -13697666 - MER113 DNA MER1_type? -6 515 427 1723 204 92 42 chr5 185932484 185932964 -13697186 - MLT1D LTR MaLR 0 505 2 672 263 42 46 chr5 185932964 185933133 -13697017 - MER113 DNA MER1_type? -94 427 258 607 262 7 7 chr5 185933141 185933286 -13696864 + MIR SINE MIR 118 262 0 192 339 61 26 chr5 185933446 185933561 -13696589 + L2 LINE L2 3153 3271 -1 280 98 66 49 chr5 185934207 185934268 -13695882 - MIR SINE MIR -98 164 103 513 327 13 3 chr5 185935316 185935520 -13694630 - MIR SINE MIR -49 159 3 24 32 0 0 chr5 185935665 185935696 -13694454 + AT_rich Low_complexity Low_complexity 1 31 0 361 316 14 75 chr5 185936430 185936708 -13693442 - MIR SINE MIR -1 261 1 806 287 109 12 chr5 185936777 185937191 -13692959 - L1ME4a LINE L1 -50 6071 5618 561 222 0 0 chr5 185938238 185938373 -13691777 + (TG)n Simple_repeat Simple_repeat 2 136 0 332 363 0 7 chr5 185938592 185938738 -13691412 + GA-rich Low_complexity Low_complexity 1 145 0 375 105 0 0 chr5 185938753 185938810 -13691340 + (GA)n Simple_repeat Simple_repeat 2 58 0 381 312 35 0 chr5 185938872 185939042 -13691108 + GA-rich Low_complexity Low_complexity 4 179 0 448 288 91 27 chr5 185940072 185940297 -13689853 + MIR SINE MIR 3 245 -17 254 294 153 8 chr5 185940482 185940648 -13689502 - MIR SINE MIR -63 145 12 213 250 315 0 chr5 185940991 185941083 -13689067 - MIR SINE MIR -118 144 24 573 257 81 21 chr5 185942255 185942454 -13687696 - MIR SINE MIR -21 241 33 366 275 64 0 chr5 185943451 185943560 -13686590 - MIR SINE MIR -71 191 76 489 62 0 0 chr5 185943975 185944040 -13686110 + (ATG)n Simple_repeat Simple_repeat 1 65 0 346 296 163 0 chr5 185944045 185944180 -13685970 - MIR SINE MIR -10 252 96 190 324 63 18 chr5 185944465 185944576 -13685574 - MIR SINE MIR -60 148 33 220 191 0 21 chr5 185945096 185945143 -13685007 + GA-rich Low_complexity Low_complexity 2 47 0 2207 134 0 3 chr5 185945897 185946203 -13683947 + AluJb SINE Alu 1 305 -7 331 280 77 30 chr5 185946386 185946554 -13683596 - MIR SINE MIR -3 259 84 488 346 59 21 chr5 185947154 185947193 -13682957 - MIR SINE MIR -10 252 216 2188 107 37 0 chr5 185947193 185947492 -13682658 - AluSx SINE Alu -2 310 1 488 346 59 21 chr5 185947492 185947689 -13682461 - MIR SINE MIR -46 216 7 255 294 170 37 chr5 185947815 185948033 -13682117 + L2 LINE L2 2591 2837 -477 2591 93 34 6 chr5 185948143 185948497 -13681653 - THE1B LTR MaLR 0 364 1 516 249 68 34 chr5 185948675 185948852 -13681298 + L1ME3A LINE L1 5966 6148 -22 1985 201 43 9 chr5 185948855 185949277 -13680873 + MER63B DNA MER1_type 1 436 0 410 283 170 40 chr5 185949306 185949659 -13680491 + L2 LINE L2 2850 3248 -24 723 92 0 0 chr5 185949666 185949775 -13680375 + (TGGA)n Simple_repeat Simple_repeat 1 109 0 696 167 97 0 chr5 185950203 185950347 -13679803 + MER63 DNA MER1_type 903 1060 0 462 335 43 21 chr5 185950391 185950624 -13679526 + MIR SINE MIR 19 256 -6 282 29 0 0 chr5 185951013 185951048 -13679102 + (CA)n Simple_repeat Simple_repeat 1 35 0 258 368 32 0 chr5 185951452 185951547 -13678603 - MIR SINE MIR -80 182 85 1021 264 32 43 chr5 185951890 185952265 -13677885 + L1ME2 LINE L1 5785 6155 -9 289 292 154 37 chr5 185952280 185952725 -13677425 - L2 LINE L2 -81 3232 2737 1137 133 4 5 chr5 185953607 185953815 -13676335 + L1P5 LINE L1 5486 5698 -453 734 223 40 135 chr5 185954006 185954635 -13675515 + L1MD2 LINE L1 5785 6347 -12 2076 135 0 26 chr5 185954876 185955187 -13674963 + AluSx SINE Alu 1 303 -9 6491 91 20 12 chr5 185955191 185956192 -13673958 - L1P3 LINE L1 -832 5314 4306 766 92 0 42 chr5 185956194 185956336 -13673814 + L1P3 LINE L1 5342 5477 -695 501 226 100 42 chr5 185956651 185956841 -13673309 + L2 LINE L2 1775 1975 -1339 211 304 0 0 chr5 185956955 185957024 -13673126 + (CA)n Simple_repeat Simple_repeat 2 70 0 771 256 72 10 chr5 185957032 185957239 -13672911 + L2 LINE L2 3094 3313 0 351 0 0 0 chr5 185957590 185957629 -13672521 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 225 196 0 0 chr5 185959912 185959958 -13670192 + (CA)n Simple_repeat Simple_repeat 1 46 0 184 292 93 50 chr5 185961204 185961436 -13668714 + MIR3 SINE MIR 2 249 -13 31 88 0 0 chr5 185961809 185961889 -13668261 + AT_rich Low_complexity Low_complexity 1 80 0 1840 112 0 90 chr5 185962345 185962667 -13667483 + AluSx SINE Alu 1 293 -19 457 218 296 0 chr5 185962918 185963060 -13667090 + MER5A DNA MER1_type 6 189 0 1625 221 137 17 chr5 185963149 185963742 -13666408 - MER39 LTR ERV1 0 707 6 1663 183 0 0 chr5 185963771 185964045 -13666105 + AluJo SINE Alu 24 297 -15 2416 167 14 27 chr5 185964241 185964679 -13665471 + MSTB1 LTR MaLR 1 432 0 2256 209 83 6 chr5 185965036 185965542 -13664608 + MER90 LTR ERV1 70 614 0 341 310 147 41 chr5 185965557 185965876 -13664274 - L2 LINE L2 -4 3268 2916 295 310 103 61 chr5 185966143 185966872 -13663278 + L1MC4a LINE L1 5123 5394 -752 2291 107 0 0 chr5 185967014 185967314 -13662836 - AluSg SINE Alu -4 306 7 222 276 0 17 chr5 185967365 185967423 -13662727 + MIR SINE MIR 20 76 -132 847 250 11 0 chr5 185967740 185967924 -13662226 - MLT1B LTR MaLR 0 390 205 189 0 0 0 chr5 185967926 185967947 -13662203 + (GA)n Simple_repeat Simple_repeat 1 21 0 1479 192 105 13 chr5 185968284 185968597 -13661553 + MER61A LTR ERV1 1 342 -1 1074 144 0 0 chr5 185968800 185968980 -13661170 + (TA)n Simple_repeat Simple_repeat 1 180 0 2326 81 3 7 chr5 185968980 185969275 -13660875 - AluSg SINE Alu -16 294 1 2188 114 0 0 chr5 185969275 185969564 -13660586 - AluSx SINE Alu -23 289 1 1041 245 72 46 chr5 185969705 185970138 -13660012 - L1ME3A LINE L1 -26 6144 5701 3514 193 8 9 chr5 185970822 185971476 -13658674 - MER82 DNA MER2_type 0 653 1 423 272 38 43 chr5 185972441 185972625 -13657525 + LTR33 LTR ERVL 329 511 -10 1344 174 100 9 chr5 185972754 185973104 -13657046 - Charlie1a DNA MER1_type 0 1455 1074 21 0 0 0 chr5 185973145 185973166 -13656984 + AT_rich Low_complexity Low_complexity 1 21 0 2423 186 105 78 chr5 185973166 185973882 -13656268 - Charlie1a DNA MER1_type -720 735 1 189 121 0 30 chr5 185974174 185974207 -13655943 + MIR SINE MIR 112 143 -65 490 252 0 15 chr5 185974327 185974458 -13655692 - L1MA4 LINE L1 -35 6265 6137 359 255 29 10 chr5 185974644 185974746 -13655404 + MIR SINE MIR 47 150 -112 1972 129 0 21 chr5 185974777 185975100 -13655050 + AluSx SINE Alu 1 317 0 1388 123 5 0 chr5 185975112 185975345 -13654805 + AluSc SINE Alu 93 326 0 1711 164 37 51 chr5 185975616 185975970 -13654180 - MER31B LTR ERV1 -117 349 1 363 179 15 0 chr5 185976108 185976175 -13653975 - MER31B LTR ERV1 -398 68 1 2242 233 17 43 chr5 185976272 185976402 -13653748 + L1M4 LINE L1 4487 4619 -1527 2158 116 3 10 chr5 185976402 185976695 -13653455 + AluSq SINE Alu 1 291 -22 2242 233 17 43 chr5 185976695 185977209 -13652941 + L1M4 LINE L1 4619 5114 -1032 487 209 117 87 chr5 185977212 185977408 -13652742 - Charlie8 DNA MER1_type -2160 257 56 317 305 43 7 chr5 185977984 185978125 -13652025 + MIR SINE MIR 51 196 -66 2116 144 0 3 chr5 185979132 185979438 -13650712 + AluSc SINE Alu 3 307 -2 219 294 91 56 chr5 185981294 185981515 -13648635 - MIR SINE MIR -20 242 30 506 204 0 0 chr5 185981712 185981800 -13648350 - MER20 DNA MER1_type -3 216 129 1630 196 23 17 chr5 185981835 185982188 -13647962 - MLT1A1 LTR MaLR -10 355 1 821 129 7 64 chr5 185982188 185982327 -13647823 - MER20 DNA MER1_type -88 131 1 616 217 87 6 chr5 185983032 185983193 -13646957 - MIR SINE MIR -71 191 18 1977 96 0 0 chr5 185983226 185983476 -13646674 + AluSx SINE Alu 47 296 -16 2331 27 0 0 chr5 185983476 185983542 -13646608 - L1PA5 LINE L1 -163 5991 5926 524 307 35 4 chr5 185983542 185983770 -13646380 - L1MB7 LINE L1 -259 5925 5691 994 146 0 15 chr5 185983811 185984073 -13646077 + (TA)n Simple_repeat Simple_repeat 1 257 0 235 247 118 32 chr5 185984387 185984480 -13645670 + MIR SINE MIR 75 175 -87 240 306 0 0 chr5 185984598 185984670 -13645480 + MIR SINE MIR 81 152 -110 211 302 58 36 chr5 185985044 185985183 -13644967 - MIR SINE MIR -67 195 54 * 489 284 37 21 chr5 185985167 185985357 -13644793 + MIR SINE MIR 40 232 -30 204 97 0 0 chr5 185985367 185985398 -13644752 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 267 277 71 36 chr5 185985780 185985892 -13644258 + L2 LINE L2 3157 3272 0 379 326 32 16 chr5 185986561 185986751 -13643399 + MIR SINE MIR 13 205 -57 290 250 270 0 chr5 185986821 185986921 -13643229 + L2 LINE L2 3137 3263 -9 219 231 90 0 chr5 185986990 185987068 -13643082 + L2 LINE L2 3138 3222 -50 254 315 21 21 chr5 185987070 185987213 -13642937 + MIR SINE MIR 103 245 -17 331 230 14 0 chr5 185987405 185987479 -13642671 - MIR SINE MIR -157 105 31 826 214 20 15 chr5 185987524 185987720 -13642430 - MER20 DNA MER1_type -4 215 19 205 275 99 11 chr5 185987807 185987898 -13642252 + MIR SINE MIR 42 140 -68 * 243 319 122 27 chr5 185987883 185988178 -13641972 + L2 LINE L2 2397 2719 -595 220 330 126 0 chr5 185988322 185988425 -13641725 + L2 LINE L2 3136 3251 -21 222 194 0 0 chr5 185988433 185988469 -13641681 + (TGGA)n Simple_repeat Simple_repeat 1 36 0 25 83 0 0 chr5 185989327 185989387 -13640763 + AT_rich Low_complexity Low_complexity 1 60 0 3740 55 0 11 chr5 185991111 185991581 -13638569 - L1PA7 LINE L1 -1 6153 5689 5192 141 79 37 chr5 185991581 185992650 -13637500 - MER11A LTR ERVK -1 1265 153 2008 48 11 48 chr5 185992701 185992933 -13637217 - L1P3 LINE L1 -455 5699 5477 2717 30 3 0 chr5 185992933 185993238 -13636912 - AluY SINE Alu -5 306 1 2008 48 11 48 chr5 185993238 185993275 -13636875 - L1P3 LINE L1 -677 5477 5440 181 228 0 53 chr5 185994445 185994502 -13635648 + MIR SINE MIR 92 145 -63 310 258 72 75 chr5 185994682 185995016 -13635134 + L1MC4a LINE L1 5597 5929 -1879 2477 74 0 0 chr5 185995179 185995476 -13634674 + AluY SINE Alu 1 297 -14 363 23 0 0 chr5 185995787 185995831 -13634319 + (TG)n Simple_repeat Simple_repeat 2 45 0 560 281 23 23 chr5 185996150 185996371 -13633779 - MIR SINE MIR -1 261 41 1395 87 5 0 chr5 185996774 185996959 -13633191 + AluY SINE Alu 122 307 -4 1034 237 70 34 chr5 185996980 185997368 -13632782 + MER113 DNA MER1_type? 1 402 -119 1854 111 16 89 chr5 185997651 185997967 -13632183 + AluSq SINE Alu 1 293 -20 245 232 196 9 chr5 185998335 185998447 -13631703 + MIR SINE MIR 47 179 -83 261 286 26 0 chr5 185998502 185998579 -13631571 + MIR3 SINE MIR 82 160 -48 477 285 69 0 chr5 185998619 185998763 -13631387 + Charlie8 DNA MER1_type 32 185 -2232 304 243 14 0 chr5 185998860 185998934 -13631216 - MIR SINE MIR -151 111 37 444 151 0 0 chr5 185999742 185999815 -13630335 - L1ME3A LINE L1 -5 6165 6093 514 232 32 0 chr5 186000312 186000437 -13629713 + MIR SINE MIR 19 147 -115 538 258 244 0 chr5 186000957 186001170 -13628980 + MLT1L LTR MaLR 344 608 -7 205 222 0 0 chr5 186001660 186001705 -13628445 + MIR SINE MIR 91 135 -127 361 323 24 18 chr5 186001844 186002011 -13628139 + MIR SINE MIR 18 185 -77 294 194 167 49 chr5 186002249 186002393 -13627757 - MIR3 SINE MIR -15 193 33 211 336 55 9 chr5 186002778 186002888 -13627262 - L2 LINE L2 -22 3250 3136 1056 131 0 24 chr5 186003027 186003195 -13626955 + L1PB4 LINE L1 5990 6153 -3 24 0 0 0 chr5 186003195 186003219 -13626931 + AT_rich Low_complexity Low_complexity 1 24 0 2272 72 4 0 chr5 186003269 186003546 -13626604 + AluSx SINE Alu 35 312 0 212 289 0 0 chr5 186003936 186003988 -13626162 + CT-rich Low_complexity Low_complexity 2 53 0 261 57 0 0 chr5 186003988 186004023 -13626127 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 280 238 95 12 chr5 186004031 186004115 -13626035 - L2 LINE L2 -13 3259 3169 436 273 124 0 chr5 186004278 186004439 -13625711 + MIR SINE MIR 8 188 -74 293 247 21 21 chr5 186004465 186004562 -13625588 + L1ME3A LINE L1 5999 6095 -75 415 219 114 18 chr5 186004664 186004778 -13625372 - MLT1A2 LTR MaLR -236 154 30 1287 254 96 14 chr5 186005146 186005583 -13624567 - MER113 DNA MER1_type? -4 517 45 1566 148 71 3 chr5 186005684 186005967 -13624183 + L1PBa LINE L1 3 304 -6559 735 108 36 0 chr5 186005967 186006078 -13624072 + L1PB1 LINE L1 6036 6150 -1 245 253 63 13 chr5 186006518 186006597 -13623553 + L2 LINE L2 3229 3311 -2 449 263 8 0 chr5 186008639 186008757 -13621393 - MIR3 SINE MIR -54 154 36 955 227 58 70 chr5 186009091 186009488 -13620662 + L1ME3A LINE L1 5775 6166 -4 1409 211 26 26 chr5 186009568 186009872 -13620278 + AluJo SINE Alu 5 308 -4 1307 161 34 22 chr5 186009889 186010156 -13619994 - MER89 LTR ERV1 -14 545 276 440 243 27 0 chr5 186010269 186010380 -13619770 - MER89 LTR ERV1 -445 114 1 912 287 47 28 chr5 186010556 186010985 -13619165 + L1MC4a LINE L1 5466 5902 -1906 195 42 0 0 chr5 186010994 186011018 -13619132 + (CA)n Simple_repeat Simple_repeat 2 25 0 1909 132 25 4 chr5 186011087 186011415 -13618735 + MER7A DNA MER2_type 13 346 0 278 304 97 59 chr5 186011468 186011860 -13618290 + L1MC4a LINE L1 5510 5916 -1892 267 239 33 54 chr5 186012072 186012164 -13617986 - MLT1J2 LTR MaLR -294 156 67 22 35 0 0 chr5 186012341 186012370 -13617780 + AT_rich Low_complexity Low_complexity 1 29 0 447 362 54 54 chr5 186012452 186012839 -13617311 - L2 LINE L2 -1669 1645 1259 2041 118 0 0 chr5 186013316 186013620 -13616530 + AluY SINE Alu 1 304 0 633 272 126 4 chr5 186013733 186014086 -13616064 - MLT2F LTR ERVL -81 582 144 3827 203 18 0 chr5 186014122 186014838 -13615312 + L1PA13 LINE L1 2 730 -6057 27 154 0 0 chr5 186015077 186015116 -13615034 + AT_rich Low_complexity Low_complexity 1 39 0 262 193 60 0 chr5 186015182 186015265 -13614885 - L1MC5 LINE L1 -400 7561 7474 14011 194 41 20 chr5 186015413 186019550 -13610600 + L1PA13 LINE L1 760 4999 -1798 1909 124 0 7 chr5 186019549 186019856 -13610294 + L1PB1 LINE L1 5785 6089 -62 * 25 51 0 0 chr5 186019872 186019911 -13610239 + AT_rich Low_complexity Low_complexity 1 39 0 313 224 15 0 chr5 186019934 186020001 -13610149 - MLT2F LTR ERVL -566 97 30 186 433 47 13 chr5 186020558 186020708 -13609442 - L2 LINE L2 -2052 1262 1108 291 277 40 10 chr5 186021346 186021447 -13608703 - L2 LINE L2 -210 3062 2959 413 324 118 38 chr5 186022615 186022930 -13607220 + L2 LINE L2 8 347 -2967 250 302 31 0 chr5 186023098 186023194 -13606956 + L2 LINE L2 577 675 -2639 251 281 31 0 chr5 186023199 186023295 -13606855 - MER94 DNA DNA -34 100 2 1893 285 77 42 chr5 186023323 186023725 -13606425 + L2 LINE L2 696 1083 -2231 2296 116 16 29 chr5 186023725 186024105 -13606045 - THE1C LTR MaLR 0 375 1 1893 285 77 42 chr5 186024105 186024194 -13605956 + L2 LINE L2 1083 1167 -2147 183 80 0 0 chr5 186024194 186024219 -13605931 + (CA)n Simple_repeat Simple_repeat 2 26 0 1893 285 77 42 chr5 186024219 186024574 -13605576 + L2 LINE L2 1167 1572 -1742 21 0 0 0 chr5 186025606 186025627 -13604523 + AT_rich Low_complexity Low_complexity 1 21 0 403 286 61 48 chr5 186027664 186028242 -13601908 + L1MC/D LINE L1 4400 4984 -1162 1983 167 0 0 chr5 186028381 186028681 -13601469 + AluSx SINE Alu 1 300 -12 266 312 109 36 chr5 186028779 186029199 -13600951 + L1MC/D LINE L1 5295 5745 -2063 31 0 0 0 chr5 186029506 186029537 -13600613 + AT_rich Low_complexity Low_complexity 1 31 0 315 266 8 40 chr5 186030623 186030747 -13599403 + MIR SINE MIR 128 247 -15 2207 104 0 0 chr5 186031602 186031891 -13598259 + AluSg SINE Alu 1 289 -21 1777 162 0 11 chr5 186033017 186033301 -13596849 + AluJb SINE Alu 22 302 -10 2436 107 0 0 chr5 186033820 186034130 -13596020 + AluSx SINE Alu 1 310 -2 29209 83 9 4 chr5 186035245 186040379 -13589771 + L1PA6 LINE L1 999 6152 -2 1684 223 75 24 chr5 186040395 186040690 -13589460 + L1MA9 LINE L1 5474 5807 -505 325 69 17 17 chr5 186040690 186040748 -13589402 + (TG)n Simple_repeat Simple_repeat 2 59 0 1684 223 75 24 chr5 186040748 186040959 -13589191 + L1MA9 LINE L1 5807 6006 -306 439 79 0 0 chr5 186040962 186041025 -13589125 + Tigger3(Golem) DNA MER2_type 2891 2953 -76 1059 222 120 85 chr5 186041206 186041320 -13588830 + L1ME3A LINE L1 5333 5442 -728 180 77 0 0 chr5 186041320 186041346 -13588804 + (TA)n Simple_repeat Simple_repeat 1 26 0 1059 222 120 85 chr5 186041346 186041807 -13588343 + L1ME3A LINE L1 5442 5928 -242 535 322 152 7 chr5 186041810 186042093 -13588057 + LTR16A LTR ERVL 4 327 -123 417 182 220 8 chr5 186042214 186042346 -13587804 + L1ME3A LINE L1 6006 6165 -5 31 26 0 0 chr5 186042369 186042407 -13587743 + AT_rich Low_complexity Low_complexity 1 38 0 222 254 30 15 chr5 186042444 186042511 -13587639 + MIR SINE MIR 72 139 -69 352 324 17 46 chr5 186042552 186042725 -13587425 - MIR SINE MIR -56 206 39 198 0 0 0 chr5 186043080 186043102 -13587048 + (GA)n Simple_repeat Simple_repeat 2 23 0 2020 139 0 24 chr5 186043909 186044203 -13585947 + AluSx SINE Alu 1 287 -25 2746 16 0 0 chr5 186047501 186047808 -13582342 - AluYa5 SINE Alu -4 307 1 781 198 39 0 chr5 186048642 186048824 -13581326 - MER53 DNA DNA 0 189 1 18916 153 47 5 chr5 186048863 186051084 -13579066 + L1M1 LINE L1 17 2144 -5421 2364 76 3 17 chr5 186051084 186051386 -13578764 + AluSg SINE Alu 1 298 -12 18916 153 47 5 chr5 186051386 186051894 -13578256 + L1M1 LINE L1 2144 2629 -4936 195 42 0 0 chr5 186051894 186051918 -13578232 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 18916 153 47 5 chr5 186051918 186052575 -13577575 + L1M1 LINE L1 2629 3545 -4020 681 220 117 52 chr5 186052637 186053152 -13576998 + L1MC/D LINE L1 5225 5786 -431 1186 145 33 84 chr5 186053258 186053680 -13576470 + MSTB LTR MaLR 40 424 -2 851 261 21 39 chr5 186054724 186055061 -13575089 - MER46C DNA MER2_type 0 338 8 240 246 198 8 chr5 186056122 186056248 -13573902 - MLT1J LTR MaLR -38 473 324 347 230 20 30 chr5 186056367 186056453 -13573697 - MLT1J LTR MaLR -369 142 58 326 197 66 0 chr5 186056453 186056529 -13573621 - MER57A LTR ERV1 0 403 323 4521 143 79 4 chr5 186056578 186057346 -13572804 - LTR1B LTR ERV1 0 826 1 248 315 70 21 chr5 186057374 186057517 -13572633 + MER57B LTR ERV1 73 222 -212 441 234 53 12 chr5 186057545 186057720 -13572430 + MER57A LTR ERV1 225 403 0 292 242 0 0 chr5 186057739 186057801 -13572349 + MLT1J LTR MaLR 81 142 -369 1761 148 26 0 chr5 186057894 186058197 -13571953 - LTR1B LTR ERV1 -113 713 403 796 197 11 11 chr5 186058219 186058402 -13571748 - L1 LINE L1 -1216 4930 4748 5010 159 21 30 chr5 186058402 186059473 -13570677 + L1 LINE L1 3674 4735 -1411 419 244 12 0 chr5 186060904 186060986 -13569164 + MLT1G LTR MaLR 206 288 -302 262 211 113 0 chr5 186061086 186061157 -13568993 + MLT1G LTR MaLR 459 537 -18 2067 194 65 10 chr5 186061185 186061583 -13568567 - MSTB LTR MaLR -6 420 1 910 283 54 44 chr5 186062319 186063044 -13567106 + L1M4 LINE L1 2154 2885 -3261 870 274 59 29 chr5 186063069 186063595 -13566555 + L1M4 LINE L1 2862 3403 -2743 4168 315 30 27 chr5 186063645 186065289 -13564861 + L1M2 LINE L1 4 1652 -5516 238 231 0 0 chr5 186065288 186065340 -13564810 + L1M2 LINE L1 2046 2097 -5001 * 9671 230 50 48 chr5 186065317 186066967 -13563183 + L1M2 LINE L1 1968 3613 -3641 2211 79 3 54 chr5 186066967 186067282 -13562868 - AluY SINE Alu -12 299 1 9671 230 50 48 chr5 186067282 186068483 -13561667 + L1M2 LINE L1 3613 4810 -2444 2291 161 5 16 chr5 186068483 186068501 -13561649 + L1PB1 LINE L1 5775 5792 -359 378 0 0 0 chr5 186068501 186068543 -13561607 + (CA)n Simple_repeat Simple_repeat 2 43 0 2291 161 5 16 chr5 186068543 186068903 -13561247 + L1PB1 LINE L1 5792 6149 -2 9671 230 50 48 chr5 186068903 186069094 -13561056 + L1M2 LINE L1 4810 4999 -2255 2204 112 7 0 chr5 186069094 186069397 -13560753 - AluY SINE Alu -6 305 1 9671 230 50 48 chr5 186069397 186070918 -13559232 + L1M2 LINE L1 4999 6511 -743 647 114 0 0 chr5 186070923 186071011 -13559139 + L1P3 LINE L1 326 413 -6048 * 3309 126 43 4 chr5 186071010 186071527 -13558623 + L1P3 LINE L1 910 1446 -5015 277 261 152 0 chr5 186071922 186072014 -13558136 - MIR SINE MIR -36 226 121 235 348 136 17 chr5 186072060 186072178 -13557972 - L2 LINE L2 0 3272 3141 610 267 58 29 chr5 186072190 186072396 -13557754 - MIR SINE MIR -3 259 48 204 359 68 48 chr5 186072597 186072700 -13557450 - L2 LINE L2 -15 3257 3153 3813 139 32 14 chr5 186073138 186073758 -13556392 - L1MA4A LINE L1 -11 6292 5662 557 165 277 27 chr5 186073781 186074005 -13556145 - MER5C DNA MER1_type -41 283 4 208 167 19 19 chr5 186074419 186074473 -13555677 + GA-rich Low_complexity Low_complexity 4 57 0 283 256 38 45 chr5 186075035 186075168 -13554982 - L2 LINE L2 -101 3212 3081 604 223 123 77 chr5 186075172 186075432 -13554718 - LTR33 LTR ERVL -4 517 246 446 238 0 0 chr5 186075775 186075859 -13554291 + MIR3 SINE MIR 87 170 -38 222 302 78 9 chr5 186075870 186075986 -13554164 + MIR3 SINE MIR 12 135 -73 698 275 18 40 chr5 186076107 186076329 -13553821 + MIR SINE MIR 2 218 -44 1160 166 9 38 chr5 186077179 186077390 -13552760 + AluJb SINE Alu 83 287 -25 279 0 0 0 chr5 186077393 186077424 -13552726 + (TAA)n Simple_repeat Simple_repeat 3 33 0 253 308 67 10 chr5 186078142 186078246 -13551904 + MIR SINE MIR 1 110 -152 199 308 39 13 chr5 186078226 186078304 -13551846 - MIR SINE MIR -155 107 28 * 234 0 0 0 chr5 186078617 186078643 -13551507 + (TAA)n Simple_repeat Simple_repeat 2 27 0 492 274 54 49 chr5 186078874 186079065 -13551085 - MIR SINE MIR -44 218 24 212 0 36 0 chr5 186079065 186079093 -13551057 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 492 274 54 49 chr5 186079093 186079105 -13551045 - MIR SINE MIR -238 24 14 251 341 106 24 chr5 186079274 186079444 -13550706 - L2 LINE L2 -2 3270 3087 346 218 0 23 chr5 186079525 186079612 -13550538 + MER4C LTR ERV1 1 85 -380 1603 176 48 67 chr5 186079617 186080165 -13549985 + MER4C LTR ERV1 43 465 0 281 300 100 14 chr5 186080173 186080313 -13549837 + MIR SINE MIR 63 214 -48 672 296 99 67 chr5 186080315 186081078 -13549072 + L2 LINE L2 2472 3268 -4 392 253 117 68 chr5 186082422 186082687 -13547463 - L2 LINE L2 0 3313 3036 375 294 107 40 chr5 186082768 186083040 -13547110 - L2 LINE L2 -469 2845 2556 1024 81 0 0 chr5 186083174 186083297 -13546853 + AluSq/x SINE Alu 1 123 -190 23 0 0 0 chr5 186083833 186083856 -13546294 + AT_rich Low_complexity Low_complexity 1 23 0 1527 229 87 65 chr5 186086551 186086674 -13543476 - LTR9 LTR ERV1 0 612 493 1705 104 127 4 chr5 186086674 186086956 -13543194 + AluSx SINE Alu 1 312 0 1527 229 87 65 chr5 186086956 186087431 -13542719 - LTR9 LTR ERV1 -119 493 1 254 231 0 0 chr5 186088211 186088263 -13541887 + LTR30 LTR ERV1 1 52 -670 2378 95 147 160 chr5 186088263 186088877 -13541273 + LTR12 LTR ERV1 57 2438 0 225 0 0 0 chr5 186088908 186088933 -13541217 + (A)n Simple_repeat Simple_repeat 1 25 0 667 264 30 20 chr5 186089070 186089271 -13540879 + MER20 DNA MER1_type 16 218 -1 1976 83 16 0 chr5 186089329 186089583 -13540567 - AluY SINE Alu -8 303 46 306 282 132 23 chr5 186090079 186090399 -13539751 - L1MC/D LINE L1 -297 5824 5564 355 274 158 0 chr5 186090423 186090638 -13539512 - L1MC/D LINE L1 -2296 5512 5264 28 29 0 0 chr5 186090784 186090819 -13539331 + AT_rich Low_complexity Low_complexity 1 35 0 2043 117 4 0 chr5 186090845 186091119 -13539031 - AluSp SINE Alu -4 309 35 299 291 187 0 chr5 186091167 186091370 -13538780 - L1MC/D LINE L1 -1182 4964 4724 2005 135 13 13 chr5 186091581 186091885 -13538265 - AluSx SINE Alu -8 304 1 460 360 44 4 chr5 186092253 186092478 -13537672 - MIR SINE MIR 0 262 29 258 241 138 0 chr5 186092922 186093009 -13537141 - L1ME3 LINE L1 -2 6160 6062 346 281 167 29 chr5 186093164 186093410 -13536740 - L2 LINE L2 -182 3131 2852 214 184 102 0 chr5 186094011 186094060 -13536090 + L2 LINE L2 3219 3272 0 345 291 119 8 chr5 186094221 186094355 -13535795 + MIR SINE MIR 52 200 -62 561 276 56 47 chr5 186094988 186095053 -13535097 + MIR SINE MIR 31 94 -168 1495 262 83 25 chr5 186095053 186095534 -13534616 - MLT1J LTR MaLR -1 510 2 561 276 56 47 chr5 186095534 186095682 -13534468 + MIR SINE MIR 94 246 -16 233 357 77 7 chr5 186095865 186096008 -13534142 - MIR SINE MIR -108 154 2 468 0 0 0 chr5 186096861 186096913 -13533237 + (TG)n Simple_repeat Simple_repeat 1 52 0 402 290 37 0 chr5 186098264 186098371 -13531779 - L2 LINE L2 -8 3264 3154 226 287 128 11 chr5 186098374 186098468 -13531682 + L2 LINE L2 2968 3072 -241 189 269 58 0 chr5 186098851 186098903 -13531247 - L2 LINE L2 -8 3264 3210 22 0 0 0 chr5 186100442 186100464 -13529686 + AT_rich Low_complexity Low_complexity 1 22 0 856 236 85 83 chr5 186100564 186101009 -13529141 + MLT1C LTR MaLR 22 467 0 417 300 92 23 chr5 186101609 186101829 -13528321 + MIR SINE MIR 19 252 -10 622 201 172 0 chr5 186101932 186102101 -13528049 - MIR SINE MIR -2 260 63 232 159 0 45 chr5 186102414 186102458 -13527692 + MIR SINE MIR 113 154 -108 1047 226 142 7 chr5 186103501 186103789 -13526361 + Cheshire DNA MER1_type 9 335 -2085 1775 159 45 20 chr5 186103801 186104159 -13525991 + Cheshire DNA MER1_type 2054 2420 0 287 286 83 45 chr5 186104628 186104761 -13525389 + MIR3 SINE MIR 4 141 -67 246 105 0 0 chr5 186105739 186105777 -13524373 + (T)n Simple_repeat Simple_repeat 1 38 0 310 192 0 90 chr5 186106557 186106635 -13523515 - MLT1K LTR MaLR -507 81 11 212 301 23 68 chr5 186107028 186107161 -13522989 + MIR SINE MIR 63 189 -73 345 317 127 32 chr5 186107210 186107560 -13522590 + L2 LINE L2 2679 3078 -194 500 304 6 13 chr5 186107839 186107997 -13522153 - L2 LINE L2 -1 3312 3156 213 307 68 0 chr5 186108075 186108163 -13521987 - MIR SINE MIR -114 148 55 1227 256 50 73 chr5 186108577 186109058 -13521092 + L2 LINE L2 2843 3312 -1 588 283 68 55 chr5 186109455 186109674 -13520476 + MIR SINE MIR 23 244 -18 451 287 85 5 chr5 186109804 186110027 -13520123 - MER102b DNA MER1_type -15 326 86 701 186 116 142 chr5 186110119 186110223 -13519927 - L1ME1 LINE L1 -5 6161 6056 231 147 0 0 chr5 186110223 186110257 -13519893 - MER3 DNA MER1_type -160 49 16 701 186 116 142 chr5 186110257 186110430 -13519720 - L1ME1 LINE L1 -110 6056 5859 1726 255 109 48 chr5 186110438 186111669 -13518481 - L1MEc LINE L1 -3379 2701 1463 4435 204 21 12 chr5 186111677 186113309 -13516841 - L1MB8 LINE L1 -22 6156 4513 1145 226 74 95 chr5 186113313 186113450 -13516700 - L1MEc LINE L1 -4621 1459 1321 2256 120 0 0 chr5 186113450 186113759 -13516391 + AluSc SINE Alu 1 309 0 1145 226 74 95 chr5 186113759 186114323 -13515827 - L1MEc LINE L1 -4759 1321 773 1537 238 67 36 chr5 186114334 186114780 -13515370 - MLT1D LTR MaLR 0 505 46 275 263 0 13 chr5 186114789 186114865 -13515285 - MLT1D-int LTR MaLR -5 1730 1656 1136 242 37 58 chr5 186114878 186115258 -13514892 - L1MEc LINE L1 -5310 760 389 327 250 37 79 chr5 186115299 186115463 -13514687 - L1MEc LINE L1 -5882 188 32 799 242 4 23 chr5 186115484 186115706 -13514444 - L1ME1 LINE L1 -293 5858 5655 219 311 189 12 chr5 186115706 186115870 -13514280 - MIR SINE MIR -50 212 20 217 132 191 59 chr5 186116286 186116354 -13513796 - MIR SINE MIR -73 189 113 475 250 78 21 chr5 186117105 186117247 -13512903 - L1MC/D LINE L1 -299 5822 5694 242 260 82 0 chr5 186118586 186118659 -13511491 - MER91C DNA MER1_type -27 113 35 218 235 74 37 chr5 186119263 186119344 -13510806 + L3 LINE CR1 1396 1479 -98 2194 108 0 3 chr5 186119453 186119749 -13510401 + AluSq SINE Alu 5 299 -14 428 279 44 7 chr5 186119926 186120062 -13510088 + MIR SINE MIR 103 243 -19 834 176 0 0 chr5 186120129 186120254 -13509896 + FLAM_A SINE Alu 1 125 -8 345 47 0 0 chr5 186120274 186120317 -13509833 + (TAAAA)n Simple_repeat Simple_repeat 1 43 0 593 267 43 0 chr5 186120579 186120740 -13509410 + MIR SINE MIR 66 233 -29 437 314 106 10 chr5 186120799 186121006 -13509144 - MIR SINE MIR -26 236 10 212 289 141 39 chr5 186122004 186122132 -13508018 - MIR3 SINE MIR -67 141 1 733 277 71 18 chr5 186122317 186122599 -13507551 + MER113 DNA MER1_type? 182 478 -43 736 202 191 6 chr5 186123700 186123873 -13506277 + MIR SINE MIR 37 241 -21 355 267 50 31 chr5 186125264 186125423 -13504727 - MIR SINE MIR -65 143 25 420 244 69 8 chr5 186125497 186125628 -13504522 - MIR SINE MIR -99 163 25 324 327 51 33 chr5 186126140 186126354 -13503796 - L2 LINE L2 -47 3225 3008 315 319 11 0 chr5 186126943 186127037 -13503113 - MIR SINE MIR -57 151 57 555 309 48 24 chr5 186127065 186127275 -13502875 - MIR SINE MIR -13 249 35 1034 223 90 61 chr5 186127300 186127745 -13502405 + L1MC4 LINE L1 7585 8042 0 2214 112 0 7 chr5 186127913 186128217 -13501933 - AluSg SINE Alu -8 302 1 2002 113 50 0 chr5 186128920 186129202 -13500948 + AluSx SINE Alu 1 296 -16 445 268 82 41 chr5 186129268 186129537 -13500613 + L1ME LINE L1 5506 5785 -336 1368 191 73 75 chr5 186129581 186129952 -13500198 + MLT1A2 LTR MaLR 1 370 -4 339 370 44 10 chr5 186130152 186130355 -13499795 - MIR SINE MIR -33 229 20 1279 108 49 0 chr5 186131097 186131331 -13498819 + AluSg/x SINE Alu 70 313 0 250 194 85 85 chr5 186131514 186131643 -13498507 - MER5A DNA MER1_type -38 151 23 * 406 256 68 8 chr5 186131527 186131644 -13498506 + MER5A DNA MER1_type 59 182 -7 870 212 5 5 chr5 186132469 186132658 -13497492 + MER53 DNA DNA 1 189 0 774 201 113 38 chr5 186134303 186134520 -13495630 - MER113 DNA MER1_type? -107 414 164 2194 105 7 3 chr5 186134520 186134816 -13495334 - AluSg SINE Alu -13 297 1 774 201 113 38 chr5 186134816 186134916 -13495234 - MER113 DNA MER1_type? -357 164 73 273 278 0 56 chr5 186135092 186135182 -13494968 - MIR3 SINE MIR -49 159 75 511 288 99 21 chr5 186135599 186135842 -13494308 - MIR SINE MIR 0 262 1 359 336 71 71 chr5 186138558 186138882 -13491268 - L3 LINE CR1 -9 1568 1245 603 244 155 0 chr5 186138883 186139051 -13491099 - MLT1L LTR MaLR 0 615 422 461 278 66 0 chr5 186139125 186139276 -13490874 - MLT1L LTR MaLR -350 265 105 274 331 55 25 chr5 186139610 186139773 -13490377 + L2 LINE L2 2729 2896 -418 185 343 14 0 chr5 186140016 186140086 -13490064 + L2 LINE L2 3243 3313 0 603 270 111 0 chr5 186140365 186140554 -13489596 - MIR SINE MIR -6 256 47 3333 279 246 11 chr5 186140557 186142396 -13487754 + HAL1 LINE L1 86 2355 -152 324 204 257 35 chr5 186142479 186142592 -13487558 + HAL1 LINE L1 2368 2505 -2 16581 24 1 1 chr5 186142722 186145324 -13484826 - L1PA2 LINE L1 -2 6153 3551 31387 40 36 0 chr5 186145428 186149273 -13480877 - L1P LINE L1 -2160 3986 5 26 30 0 0 chr5 186149665 186149698 -13480452 + AT_rich Low_complexity Low_complexity 1 33 0 228 302 58 43 chr5 186150099 186150238 -13479912 - MLT1K LTR MaLR -241 347 207 187 322 0 17 chr5 186150616 186150675 -13479475 + L2 LINE L2 3207 3264 -8 2180 108 0 19 chr5 186152517 186152824 -13477326 + AluSq SINE Alu 1 301 -12 306 87 0 0 chr5 186152840 186152886 -13477264 + (TA)n Simple_repeat Simple_repeat 1 46 0 584 233 87 52 chr5 186155174 186155346 -13474804 - MER5B DNA MER1_type 0 178 1 447 282 138 0 chr5 186157532 186157713 -13472437 - MIR SINE MIR -6 256 51 214 192 0 167 chr5 186157738 186157816 -13472334 + MER5A DNA MER1_type 97 161 -28 234 200 269 46 chr5 186158944 186159074 -13471076 + Charlie8 DNA MER1_type 54 212 -2205 229 286 16 0 chr5 186159094 186159157 -13470993 - L2 LINE L2 -6 3266 3203 551 247 165 0 chr5 186159180 186159338 -13470812 + MER5A DNA MER1_type 1 184 -5 310 330 10 10 chr5 186159378 186159475 -13470675 + MER5A DNA MER1_type 56 152 -37 512 208 18 24 chr5 186159641 186159809 -13470341 + (TATATG)n Simple_repeat Simple_repeat 6 172 0 198 248 140 102 chr5 186162923 186163080 -13467070 - MIR SINE MIR -74 188 26 * 255 234 207 27 chr5 186163074 186163185 -13466965 + MIR SINE MIR 131 261 -1 264 318 114 0 chr5 186163886 186164017 -13466133 + MIR SINE MIR 35 178 -67 335 290 10 10 chr5 186164042 186164142 -13466008 + MER81 DNA DNA 10 109 -5 301 222 78 22 chr5 186164834 186164924 -13465226 + L1MCa LINE L1 1970 2064 -4362 189 0 0 0 chr5 186164942 186164963 -13465187 + (CA)n Simple_repeat Simple_repeat 2 22 0 436 181 0 47 chr5 186165335 186165462 -13464688 - MER96B DNA MER1_type? -236 181 61 221 264 28 42 chr5 186165477 186165549 -13464601 - MIR SINE MIR -70 192 122 206 174 257 101 chr5 186166589 186166698 -13463452 - MIR3 SINE MIR -2 206 81 220 359 29 0 chr5 186167249 186167352 -13462798 + MIR SINE MIR 86 191 -71 1996 169 103 19 chr5 186167381 186167806 -13462344 + MER65C LTR ERV1 1 461 0 1530 209 44 3 chr5 186168008 186168305 -13461845 + AluJo SINE Alu 3 311 -1 2571 78 0 0 chr5 186168456 186168762 -13461388 - AluY SINE Alu -4 307 2 213 272 32 112 chr5 186169211 186169336 -13460814 - MIR SINE MIR -120 142 28 514 328 106 17 chr5 186169389 186169624 -13460526 + MIR SINE MIR 2 257 -5 218 293 43 73 chr5 186169774 186169938 -13460212 - MIR3 SINE MIR -32 176 18 600 285 32 27 chr5 186170031 186170217 -13459933 + MIR SINE MIR 23 209 -53 713 306 133 26 chr5 186170577 186171278 -13458872 + L2 LINE L2 2490 3272 0 207 297 0 0 chr5 186172325 186172426 -13457724 + (CA)n Simple_repeat Simple_repeat 2 102 0 272 188 0 43 chr5 186172794 186172863 -13457287 - MER96B DNA MER1_type? -109 66 1 565 309 105 54 chr5 186172923 186173295 -13456855 + L2 LINE L2 2864 3254 -18 440 227 81 64 chr5 186173502 186173674 -13456476 + L2 LINE L2 3138 3312 -1 598 210 22 14 chr5 186173951 186174089 -13456061 - MIR SINE MIR -76 186 48 254 125 25 0 chr5 186174518 186174558 -13455592 - MIR SINE MIR -113 149 109 947 225 43 94 chr5 186175896 186176073 -13454077 + MER93a LTR ERV1 66 218 -184 2505 80 0 13 chr5 186176073 186176384 -13453766 - AluSc SINE Alu 0 309 3 947 225 43 94 chr5 186176384 186176557 -13453593 + MER93a LTR ERV1 218 398 -4 490 218 49 28 chr5 186176979 186177121 -13453029 + MIR3 SINE MIR 13 157 -51 888 257 5 0 chr5 186177438 186177656 -13452494 + MER58A DNA MER1_type 6 224 0 371 261 30 37 chr5 186178023 186178157 -13451993 - MER5A DNA MER1_type 0 189 57 2447 47 0 4 chr5 186178191 186178470 -13451680 + AluY SINE Alu 23 300 -11 291 186 237 21 chr5 186180266 186180324 -13449826 - MIR3 SINE MIR -25 183 139 2029 85 0 0 chr5 186180324 186180572 -13449578 + AluSc SINE Alu 55 302 -7 291 186 237 21 chr5 186180572 186180610 -13449540 - MIR3 SINE MIR -69 139 66 2398 82 16 3 chr5 186180940 186181246 -13448904 + AluSx SINE Alu 1 310 -2 295 271 93 17 chr5 186181637 186181755 -13448395 - L2 LINE L2 -5 3308 3182 198 248 140 102 chr5 186182830 186182987 -13447163 - MIR SINE MIR -74 188 26 * 255 234 207 27 chr5 186182981 186183092 -13447058 + MIR SINE MIR 131 261 -1 264 318 114 0 chr5 186183793 186183924 -13446226 + MIR SINE MIR 35 178 -67 335 290 10 10 chr5 186183949 186184049 -13446101 + MER81 DNA DNA 10 109 -5 195 273 0 0 chr5 186184932 186184976 -13445174 - MIR SINE MIR -62 146 103 231 315 158 8 chr5 186185014 186185141 -13445009 - L3 LINE CR1 -6 1571 1426 666 237 16 41 chr5 186185145 186185339 -13444811 - MER5A DNA MER1_type 0 189 1 2542 67 3 6 chr5 186185507 186185819 -13444331 - AluY SINE Alu 0 311 1 353 254 99 84 chr5 186185957 186186170 -13443980 - L1ME4a LINE L1 -4 6117 5902 242 267 67 44 chr5 186187172 186187262 -13442888 + MIR SINE MIR 53 144 -118 1776 159 7 17 chr5 186187630 186187920 -13442230 + AluJo SINE Alu 17 303 -9 526 211 191 44 chr5 186188739 186188943 -13441207 + MIR SINE MIR 29 262 0 228 220 121 33 chr5 186189540 186189631 -13440519 - L2 LINE L2 -214 3099 3001 202 309 62 0 chr5 186190282 186190363 -13439787 + MIR SINE MIR 46 131 -77 303 292 62 18 chr5 186190439 186190552 -13439598 + MIR3 SINE MIR 82 199 -9 258 310 31 31 chr5 186190542 186190671 -13439479 + MER5A DNA MER1_type 36 164 -25 * 198 209 0 0 chr5 186190981 186191024 -13439126 + G-rich Low_complexity Low_complexity 5 47 0 326 260 0 79 chr5 186191025 186191152 -13438998 - MER112 DNA MER1_type -102 158 42 2318 103 13 0 chr5 186191748 186192050 -13438100 + AluSq SINE Alu 1 306 -7 2316 68 0 4 chr5 186192306 186192584 -13437566 - AluY SINE Alu -16 295 19 454 323 50 23 chr5 186193366 186193586 -13436564 - MIR SINE MIR -16 246 21 728 262 129 4 chr5 186193666 186193899 -13436251 - MIR SINE MIR 0 262 1 344 311 66 0 chr5 186193946 186194052 -13436098 - MIR3 SINE MIR -40 168 56 295 318 135 70 chr5 186194730 186195145 -13435005 + L2 LINE L2 2830 3271 -1 4511 238 111 29 chr5 186195231 186195776 -13434374 - L1MEc LINE L1 -4595 1801 1302 2257 118 0 0 chr5 186195776 186196073 -13434077 - AluSx SINE Alu -15 297 1 4511 238 111 29 chr5 186196073 186197159 -13432991 - L1MEc LINE L1 -5094 1302 37 353 333 64 6 chr5 186197216 186197372 -13432778 - Charlie8 DNA MER1_type -2156 261 97 656 187 160 0 chr5 186197501 186197651 -13432499 + MER3 DNA MER1_type 20 193 -16 643 304 113 0 chr5 186197921 186198168 -13431982 + Charlie8 DNA MER1_type 2 276 -2141 198 0 0 0 chr5 186198307 186198329 -13431821 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 324 197 16 0 chr5 186198347 186198408 -13431742 + Charlie8 DNA MER1_type 1361 1422 -995 462 237 124 40 chr5 186198420 186198597 -13431553 - MER117 DNA MER1_type -1 196 5 421 242 109 62 chr5 186199133 186199344 -13430806 - Charlie8 DNA MER1_type -2152 265 45 335 312 79 24 chr5 186199605 186199811 -13430339 - MIR SINE MIR -30 232 17 878 225 22 45 chr5 186200030 186200252 -13429898 + MIR SINE MIR 14 230 -32 1045 74 17 23 chr5 186200613 186200789 -13429361 + (TTTC)n Simple_repeat Simple_repeat 2 176 0 433 282 67 92 chr5 186201310 186201834 -13428316 + MLT1J LTR MaLR 1 511 0 1019 98 11 11 chr5 186201937 186202111 -13428039 + (GAAA)n Simple_repeat Simple_repeat 2 175 0 244 153 0 34 chr5 186202114 186202173 -13427977 + GA-rich Low_complexity Low_complexity 5 61 0 599 59 0 12 chr5 186202186 186202271 -13427879 + (GGAA)n Simple_repeat Simple_repeat 1 84 0 257 274 8 60 chr5 186202660 186202777 -13427373 - MIR3 SINE MIR -16 192 82 286 272 68 10 chr5 186203020 186203123 -13427027 + MIR3 SINE MIR 79 187 -21 209 364 64 36 chr5 186203127 186203237 -13426913 + L2 LINE L2 3160 3272 0 425 305 142 39 chr5 186203244 186203526 -13426624 + L3 LINE CR1 1261 1571 -6 364 248 160 39 chr5 186204774 186204980 -13425170 - L1ME4a LINE L1 -182 5939 5709 354 247 228 25 chr5 186204983 186205145 -13425005 - MIR SINE MIR 0 262 68 188 303 20 40 chr5 186205928 186206027 -13424123 - MER5B DNA MER1_type -81 97 1 294 279 31 62 chr5 186206047 186206176 -13423974 - MIR SINE MIR -68 140 16 202 238 95 32 chr5 186206209 186206272 -13423878 - L2 LINE L2 -56 3257 3191 656 266 0 6 chr5 186206408 186206566 -13423584 - MIR SINE MIR -48 214 58 225 322 96 9 chr5 186207459 186207574 -13422576 + MIR3 SINE MIR 81 205 -3 213 330 0 58 chr5 186207820 186207923 -13422227 + MIR SINE MIR 96 192 -70 386 371 62 14 chr5 186208127 186208337 -13421813 + MIR SINE MIR 21 240 -22 226 289 72 0 chr5 186209351 186209434 -13420716 + MIR SINE MIR 80 168 -94 315 0 0 0 chr5 186209768 186209803 -13420347 + (CA)n Simple_repeat Simple_repeat 1 35 0 2373 93 3 10 chr5 186210147 186210460 -13419690 - AluSp SINE Alu 0 313 3 1724 196 0 22 chr5 186210832 186211148 -13419002 - AluJo SINE Alu -3 309 1 432 301 39 20 chr5 186211432 186211585 -13418565 - MIR SINE MIR -100 162 7 240 171 316 13 chr5 186211588 186211664 -13418486 - MIR SINE MIR -140 122 24 1864 140 11 7 chr5 186212408 186212686 -13417464 + AluSx SINE Alu 27 305 -7 2027 125 0 3 chr5 186212730 186213035 -13417115 - AluSx SINE Alu -8 304 1 335 308 19 19 chr5 186214900 186215007 -13415143 - MIR SINE MIR -63 145 39 881 98 0 0 chr5 186215485 186215617 -13414533 + AluY SINE Alu 173 304 -7 288 260 0 13 chr5 186215641 186215718 -13414432 + LTR67 LTR ERVL 471 546 -11 262 224 136 88 chr5 186215787 186215912 -13414238 + MIR3 SINE MIR 11 141 -67 1235 130 0 0 chr5 186216170 186216355 -13413795 + AluSg/x SINE Alu 125 309 -3 552 254 70 38 chr5 186217277 186217490 -13412660 + MIR SINE MIR 11 230 -32 298 253 123 26 chr5 186217851 186218005 -13412145 - Charlie8 DNA MER1_type -2137 280 112 1909 208 35 52 chr5 186218038 186218552 -13411598 + MLT1D LTR MaLR 1 505 0 180 0 0 0 chr5 186219179 186219199 -13410951 + (TTA)n Simple_repeat Simple_repeat 2 21 0 392 220 110 0 chr5 186219720 186219820 -13410330 - L2 LINE L2 0 3313 3203 216 191 24 0 chr5 186219822 186219864 -13410286 + (ATG)n Simple_repeat Simple_repeat 2 44 0 896 215 63 0 chr5 186220003 186220194 -13409956 - MER3 DNA MER1_type -6 203 1 672 284 49 0 chr5 186220225 186220408 -13409742 + MIR SINE MIR 47 238 -24 857 264 126 7 chr5 186220436 186220936 -13409214 - L2 LINE L2 -146 3167 2602 665 258 208 21 chr5 186220962 186221299 -13408851 + L2 LINE L2 2914 3313 0 369 242 31 39 chr5 186221343 186221471 -13408679 - MIR3 SINE MIR -76 132 6 458 250 41 77 chr5 186222321 186222517 -13407633 - L2 LINE L2 0 3313 3125 219 280 240 0 chr5 186223604 186223679 -13406471 + L2 LINE L2 3183 3275 -38 776 228 107 55 chr5 186224337 186224694 -13405456 - MER57A LTR ERV1 0 403 47 567 319 60 3 chr5 186224747 186225029 -13405121 - L1ME4a LINE L1 -239 5882 5585 317 228 243 7 chr5 186225316 186225452 -13404698 + MIR SINE MIR 6 173 -89 246 128 0 0 chr5 186226063 186226102 -13404048 + (CATTT)n Simple_repeat Simple_repeat 1 39 0 240 218 45 91 chr5 186227036 186227086 -13403064 + LTR67 LTR ERVL 450 501 -56 1765 146 6 53 chr5 186227086 186227407 -13402743 - AluSx SINE Alu -6 306 1 240 218 45 91 chr5 186227407 186227466 -13402684 + LTR67 LTR ERVL 501 554 -3 319 253 12 12 chr5 186228769 186228852 -13401298 + MIR SINE MIR 70 152 -110 700 127 110 0 chr5 186228892 186229010 -13401140 - L1MB1 LINE L1 -521 5813 5683 2013 157 28 0 chr5 186229010 186229366 -13400784 + L1MB1 LINE L1 5802 6168 0 1412 233 45 49 chr5 186230910 186231357 -13398793 - MLT1C LTR MaLR -17 450 6 791 243 37 26 chr5 186231941 186233042 -13397108 + L1ME1 LINE L1 3968 5249 -897 11927 153 26 27 chr5 186233059 186235097 -13395053 + Ricksha_c DNA DNA 8 2043 -3 3322 238 54 13 chr5 186235098 186235957 -13394193 + L1ME1 LINE L1 5255 6148 -18 252 0 0 0 chr5 186236458 186236486 -13393664 + (TA)n Simple_repeat Simple_repeat 1 28 0 1753 172 33 18 chr5 186237202 186237533 -13392617 + L1MC3 LINE L1 7105 7440 -345 1289 105 0 6 chr5 186237533 186237714 -13392436 + AluSg SINE Alu 64 243 -67 629 153 68 45 chr5 186237714 186237891 -13392259 + L1MC3 LINE L1 7595 7775 -10 350 255 200 35 chr5 186238784 186239039 -13391111 + L2 LINE L2 1858 2154 -1160 639 202 157 11 chr5 186239151 186239329 -13390821 - MIR SINE MIR -9 253 50 559 240 6 56 chr5 186239460 186239639 -13390511 - MER69A DNA AcHobo 0 177 8 546 256 0 0 chr5 186240627 186240791 -13389359 + (TCCA)n Simple_repeat Simple_repeat 3 166 0 411 252 0 0 chr5 186240814 186240925 -13389225 + (TCCA)n Simple_repeat Simple_repeat 1 111 0 515 282 222 44 chr5 186240928 186241373 -13388777 - L2 LINE L2 -4 3309 2798 375 278 53 23 chr5 186241396 186241529 -13388621 + MIR SINE MIR 37 173 -89 381 22 0 0 chr5 186242262 186242308 -13387842 + (CA)n Simple_repeat Simple_repeat 2 47 0 4686 151 77 13 chr5 186243298 186244147 -13386003 - MER4D LTR ERV1 0 903 1 276 191 19 9 chr5 186246003 186246108 -13384042 + GA-rich Low_complexity Low_complexity 2 107 0 2174 114 0 0 chr5 186246219 186246525 -13383625 + AluSx SINE Alu 1 306 -6 399 282 118 12 chr5 186246798 186246968 -13383182 + MIR SINE MIR 56 243 -19 408 227 1 79 chr5 186247270 186247433 -13382717 + MIR SINE MIR 35 183 -56 499 269 75 6 chr5 186247742 186247902 -13382248 + MIR SINE MIR 83 253 -9 296 109 43 0 chr5 186248583 186248629 -13381521 + MIR SINE MIR 96 143 -65 520 303 59 34 chr5 186248963 186249201 -13380949 + MIR SINE MIR 19 262 0 * 562 315 22 0 chr5 186249199 186249380 -13380770 - MIR SINE MIR -15 247 63 395 320 39 8 chr5 186249380 186249508 -13380642 - L2 LINE L2 0 3272 3141 288 53 0 0 chr5 186250914 186250952 -13379198 + (TG)n Simple_repeat Simple_repeat 2 39 0 2148 106 3 3 chr5 186251591 186251892 -13378258 - AluSq SINE Alu -12 301 1 449 217 46 80 chr5 186252335 186252510 -13377640 - MIR SINE MIR -34 228 60 1879 209 0 0 chr5 186252598 186252938 -13377212 - MER7A DNA MER2_type 0 346 9 235 282 99 0 chr5 186252983 186253054 -13377096 - MIR3 SINE MIR -36 172 95 375 259 12 0 chr5 186254073 186254154 -13375996 - MER81 DNA DNA -30 84 3 4688 140 46 33 chr5 186254694 186255587 -13374563 - MER4D LTR ERV1 0 866 1 1013 274 94 2 chr5 186255589 186256118 -13374032 - L2 LINE L2 -9 3304 2716 180 250 0 0 chr5 186256462 186256498 -13373652 + L2 LINE L2 3213 3248 -24 219 253 116 21 chr5 186256678 186256773 -13373377 - L2 LINE L2 0 3272 3169 * 408 263 102 15 chr5 186256772 186256909 -13373241 + MER5A DNA MER1_type 38 186 -3 900 214 155 48 chr5 186256989 186257409 -13372741 - MLT1C LTR MaLR -2 465 1 192 371 34 17 chr5 186257452 186257627 -13372523 - L2 LINE L2 -755 2559 2382 598 248 0 34 chr5 186258881 186259030 -13371120 + MIR SINE MIR 93 236 -26 465 222 82 113 chr5 186259179 186259373 -13370777 + L2 LINE L2 3121 3308 -5 755 214 246 36 chr5 186259482 186259988 -13370162 + LTR50 LTR ERVL 96 792 -3 529 273 91 36 chr5 186260222 186260442 -13369708 + MIR SINE MIR 30 261 -1 184 160 40 40 chr5 186260455 186260505 -13369645 - L3 LINE CR1 -305 1272 1223 539 250 118 25 chr5 186261479 186261683 -13368467 - MIR SINE MIR -27 235 13 * 814 302 99 25 chr5 186261652 186262016 -13368134 + L2 LINE L2 2923 3313 0 300 224 75 90 chr5 186262697 186262831 -13367319 + L2 LINE L2 3182 3313 0 2422 85 0 3 chr5 186262876 186263171 -13366979 - AluY SINE Alu -17 294 1 183 309 10 62 chr5 186263737 186263834 -13366316 + L3 LINE CR1 1483 1574 -3 195 196 20 20 chr5 186266965 186267016 -13363134 - L2 LINE L2 -14 3258 3208 335 312 43 28 chr5 186267639 186267780 -13362370 + L2 LINE L2 3127 3269 -3 337 246 105 73 chr5 186268164 186268376 -13361774 + MIR SINE MIR 23 255 -7 1856 171 13 0 chr5 186268542 186268840 -13361310 - AluJb SINE Alu -10 302 1 407 296 28 51 chr5 186269480 186269656 -13360494 + MIR SINE MIR 22 193 -69 280 196 120 43 chr5 186269675 186269767 -13360383 - MER96 DNA MER1_type? -76 99 1 349 201 166 11 chr5 186269767 186269881 -13360269 - MIR SINE MIR -65 143 33 406 285 120 10 chr5 186271318 186271518 -13358632 + MIR SINE MIR 30 251 -11 463 269 113 6 chr5 186272522 186272580 -13357570 + MIR3 SINE MIR 23 73 -135 1462 167 42 74 chr5 186272580 186272957 -13357193 - MLT1A1 LTR MaLR 0 365 1 463 269 113 6 chr5 186272957 186273058 -13357092 + MIR3 SINE MIR 73 199 -9 492 341 23 14 chr5 186273083 186273297 -13356853 - MIR SINE MIR -22 240 25 1773 204 56 11 chr5 186274292 186274665 -13355485 + MLT1B LTR MaLR 1 390 0 1896 121 51 91 chr5 186274704 186275015 -13355135 - L1MB3 LINE L1 -2 6181 5892 1917 137 0 18 chr5 186275015 186275300 -13354850 - AluJb SINE Alu -12 300 21 1896 121 51 91 chr5 186275300 186275441 -13354709 - L1MB3 LINE L1 -291 5892 5747 353 273 185 20 chr5 186275460 186275777 -13354373 + L2 LINE L2 2701 3180 -133 1288 176 61 4 chr5 186275788 186276049 -13354101 - L1MA9 LINE L1 -31 6281 6006 469 234 48 40 chr5 186276050 186276174 -13353976 + L2 LINE L2 3164 3288 -25 212 237 250 0 chr5 186276198 186276274 -13353876 - MIR SINE MIR -72 136 42 327 296 91 59 chr5 186276703 186276923 -13353227 + MIR SINE MIR 28 254 -8 306 305 15 76 chr5 186277977 186278056 -13352094 + L2 LINE L2 3132 3203 -69 1991 113 18 0 chr5 186278056 186278489 -13351661 + AluSq SINE Alu 6 443 0 306 305 15 76 chr5 186278489 186278539 -13351611 + L2 LINE L2 3203 3254 -18 654 267 98 69 chr5 186278851 186279267 -13350883 + L1ME4a LINE L1 5613 6016 -105 279 0 0 0 chr5 186279267 186279298 -13350852 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2102 114 0 0 chr5 186279300 186279581 -13350569 - AluSc SINE Alu -28 281 1 654 267 98 69 chr5 186279581 186279651 -13350499 + L1ME4a LINE L1 6016 6116 -5 313 181 108 90 chr5 186279936 186280102 -13350048 + L1MC4 LINE L1 7874 8042 0 612 284 38 68 chr5 186280120 186280356 -13349794 + MIR SINE MIR 2 230 -32 373 329 110 7 chr5 186281275 186281430 -13348720 - MIR SINE MIR -6 256 86 297 426 44 12 chr5 186281964 186282215 -13347935 + L3 LINE CR1 199 457 -1120 718 256 104 17 chr5 186282507 186282737 -13347413 + MIR SINE MIR 13 262 0 2367 218 98 45 chr5 186282904 186283653 -13346497 - MER21B LTR ERV1 -57 806 19 1846 212 26 19 chr5 186284411 186284874 -13345276 - Charlie1b DNA MER1_type -2 521 56 21 36 0 0 chr5 186285218 186285246 -13344904 + AT_rich Low_complexity Low_complexity 1 28 0 710 137 48 48 chr5 186286129 186286275 -13343875 - L1MD1 LINE L1 0 6242 6097 211 278 173 15 chr5 186286668 186286801 -13343349 + MIR SINE MIR 14 167 -95 * 753 292 102 0 chr5 186286773 186287009 -13343141 - MIR SINE MIR -1 261 2 2598 57 0 10 chr5 186287166 186287480 -13342670 - AluY SINE Alu 0 311 1 1893 83 0 18 chr5 186287499 186287776 -13342374 - L1PA13 LINE L1 -124 6039 5768 909 94 0 0 chr5 186287777 186287905 -13342245 + L1PA13 LINE L1 6035 6162 -1 195 273 0 0 chr5 186288003 186288047 -13342103 - MIR SINE MIR -62 146 103 231 315 158 8 chr5 186288085 186288212 -13341938 - L3 LINE CR1 -6 1571 1426 666 237 16 41 chr5 186288216 186288410 -13341740 - MER5A DNA MER1_type 0 189 1 2538 74 3 0 chr5 186288579 186288889 -13341261 - AluY SINE Alu 0 311 1 368 249 99 84 chr5 186289027 186289240 -13340910 - L1ME4a LINE L1 -4 6117 5902 242 267 67 44 chr5 186290242 186290332 -13339818 + MIR SINE MIR 53 144 -118 1776 159 7 17 chr5 186290700 186290990 -13339160 + AluJo SINE Alu 17 303 -9 539 226 181 34 chr5 186291809 186292013 -13338137 + MIR SINE MIR 29 262 0 326 308 131 8 chr5 186293265 186293395 -13336755 - MER5B DNA MER1_type -23 155 10 513 67 13 0 chr5 186293668 186293743 -13336407 - AluSp/q SINE Alu -6 307 232 189 174 152 0 chr5 186293890 186293936 -13336214 + L2 LINE L2 3220 3272 0 637 174 7 7 chr5 186293942 186294080 -13336070 + GA-rich Low_complexity Low_complexity 4 141 0 537 315 64 18 chr5 186294320 186294539 -13335611 - MIR SINE MIR 0 262 34 181 290 16 0 chr5 186294556 186294618 -13335532 + MIR SINE MIR 61 123 -139 735 178 17 52 chr5 186295089 186295263 -13334887 + MER5B DNA MER1_type 4 171 -7 243 230 54 40 chr5 186295255 186295329 -13334821 - MIR3 SINE MIR -36 172 98 * 516 285 154 23 chr5 186295661 186295966 -13334184 + L3 LINE CR1 1158 1502 -75 352 190 0 0 chr5 186296678 186296736 -13333414 - MIR SINE MIR -69 139 82 922 217 125 81 chr5 186296738 186296854 -13333296 + MLT1D LTR MaLR 1 110 -357 2241 89 10 22 chr5 186296854 186297168 -13332982 + AluY SINE Alu 1 310 -1 922 217 125 81 chr5 186297168 186297496 -13332654 + MLT1D LTR MaLR 110 455 -12 262 315 11 11 chr5 186299421 186299513 -13330637 + L3b LINE CR1 1314 1405 -178 301 306 238 26 chr5 186299715 186299908 -13330242 + MIR SINE MIR 29 262 0 373 190 0 13 chr5 186300791 186300870 -13329280 + MIR SINE MIR 60 137 -71 2005 142 11 0 chr5 186301252 186301533 -13328617 + AluSx SINE Alu 7 290 -22 359 260 47 16 chr5 186302629 186302756 -13327394 - MIR SINE MIR -42 220 90 336 214 197 8 chr5 186302755 186302872 -13327278 + MIR SINE MIR 95 233 -29 * 1477 266 117 33 chr5 186302872 186303421 -13326729 + MLT1G1 LTR MaLR 1 595 0 2052 148 0 3 chr5 186303556 186303859 -13326291 + AluSx SINE Alu 5 306 -6 190 206 0 0 chr5 186303933 186303967 -13326183 - L2 LINE L2 -18 3295 3262 185 132 26 0 chr5 186303969 186304007 -13326143 + (CATATA)n Simple_repeat Simple_repeat 1 39 0 231 238 105 57 chr5 186304063 186304168 -13325982 - MIR3 SINE MIR -97 111 2 284 307 33 47 chr5 186305281 186305431 -13324719 + L2 LINE L2 3109 3256 -57 231 179 18 0 chr5 186305500 186305556 -13324594 - L1ME LINE L1 -235 5886 5830 4480 162 7 0 chr5 186305602 186306374 -13323776 - L1PA16 LINE L1 -1 6165 5389 476 211 206 34 chr5 186306946 186307121 -13323029 - MER63A DNA MER1_type -4 206 2 306 265 107 46 chr5 186307313 186307361 -13322789 - LTR33 LTR ERVL -306 215 171 5580 120 23 38 chr5 186307361 186308278 -13321872 - MER4D LTR ERV1 0 903 1 306 265 107 46 chr5 186308278 186308425 -13321725 - LTR33 LTR ERVL -350 171 8 3337 119 20 11 chr5 186308680 186309287 -13320863 - MER4B LTR ERV1 -1 778 2 326 291 48 51 chr5 186309288 186309601 -13320549 - L1ME LINE L1 -438 5683 5372 259 174 0 0 chr5 186309847 186309893 -13320257 - MIR3 SINE MIR -8 200 155 857 214 23 6 chr5 186309896 186310069 -13320081 - MER41D LTR ERV1 0 557 382 602 307 97 9 chr5 186310481 186310947 -13319203 - L1ME4a LINE L1 -4 6117 5611 315 286 86 0 chr5 186311007 186311112 -13319038 - MIR SINE MIR -58 150 37 2026 146 32 22 chr5 186311191 186311562 -13318588 - THE1C LTR MaLR 0 375 1 567 280 78 21 chr5 186311589 186311782 -13318368 - MIR SINE MIR 0 262 59 797 205 89 16 chr5 186311804 186311994 -13318156 + MER3 DNA MER1_type 1 204 -5 1794 172 21 0 chr5 186312498 186312788 -13317362 + AluJb SINE Alu 3 298 -14 240 156 22 0 chr5 186312797 186312842 -13317308 - L2 LINE L2 -19 3253 3208 1272 219 58 55 chr5 186312859 186313311 -13316839 - MLT1C LTR MaLR -5 462 10 818 272 64 35 chr5 186313360 186313735 -13316415 - MLT1J2 LTR MaLR 0 450 65 254 272 36 32 chr5 186313862 186313957 -13316193 - MIR SINE MIR -46 162 67 245 420 47 0 chr5 186314602 186314752 -13315398 + L2 LINE L2 3098 3254 -18 862 247 163 24 chr5 186315381 186315825 -13314325 - MLT1H LTR MaLR 0 549 3 418 298 20 13 chr5 186315930 186316081 -13314069 - L1ME LINE L1 -339 5782 5631 1960 144 3 32 chr5 186316206 186316518 -13313632 - AluSx SINE Alu -9 303 1 578 283 102 6 chr5 186317342 186317508 -13312642 + MIR SINE MIR 4 185 -77 421 319 71 8 chr5 186318937 186319140 -13311010 + MIR SINE MIR 40 261 -1 191 208 63 51 chr5 186320125 186320225 -13309925 - MIR SINE MIR -105 103 10 183 250 89 0 chr5 186320539 186320595 -13309555 + MIR SINE MIR 13 73 -189 377 313 119 6 chr5 186320595 186320771 -13309379 + MER91A DNA MER1_type 1 196 0 * 595 294 25 15 chr5 186320771 186320949 -13309201 + MIR SINE MIR 68 247 -15 566 292 52 7 chr5 186322263 186322417 -13307733 - MIR SINE MIR -93 169 9 210 200 22 0 chr5 186322526 186322571 -13307579 - L2 LINE L2 -223 3049 3004 303 271 65 76 chr5 186322659 186322936 -13307214 - L2 LINE L2 -11 3302 3029 266 273 81 20 chr5 186322987 186323086 -13307064 + L2 LINE L2 3168 3272 0 995 255 107 27 chr5 186323739 186324104 -13306046 + L2 LINE L2 2920 3313 0 434 309 83 30 chr5 186324446 186324614 -13305536 + MIR SINE MIR 20 196 -66 21 0 0 0 chr5 186324939 186324960 -13305190 + AT_rich Low_complexity Low_complexity 1 21 0 257 329 18 54 chr5 186325017 186325184 -13304966 + MER117 DNA MER1_type 5 165 -32 2522 148 13 0 chr5 186325284 186325682 -13304468 + MER57A LTR ERV1 1 403 0 327 167 0 0 chr5 186325965 186326013 -13304137 + L2 LINE L2 3221 3268 -4 880 156 30 18 chr5 186326336 186326503 -13303647 - MER20 DNA MER1_type 0 219 51 276 311 76 17 chr5 186326705 186326824 -13303326 + L2 LINE L2 3128 3253 -19 240 330 145 9 chr5 186326833 186327054 -13303096 - L2 LINE L2 -249 3064 2814 325 113 0 19 chr5 186327705 186327758 -13302392 - MER75 DNA T2_type 0 514 463 533 173 19 29 chr5 186327780 186327884 -13302266 - MIR SINE MIR -75 187 85 345 248 203 7 chr5 186327994 186328147 -13302003 + L1ME4a LINE L1 5612 5794 -327 365 260 24 0 chr5 186328244 186328367 -13301783 + L1ME4a LINE L1 5995 6120 -1 2193 122 7 0 chr5 186329161 186329457 -13300693 + AluSx SINE Alu 1 298 -14 208 315 110 78 chr5 186329668 186330094 -13300056 + L2 LINE L2 2825 3264 -8 402 335 90 0 chr5 186330800 186330967 -13299183 - MIR SINE MIR -72 190 9 552 180 25 0 chr5 186331036 186331156 -13298994 - MER33 DNA MER1_type -5 319 197 1482 142 0 41 chr5 186331156 186331423 -13298727 + Tigger2a DNA MER2_type 1 256 -178 1087 103 0 0 chr5 186331423 186331569 -13298581 + AluSp/q SINE Alu 161 306 -7 1077 169 11 0 chr5 186331569 186331752 -13298398 + Tigger2a DNA MER2_type 260 444 0 614 213 28 104 chr5 186331752 186331963 -13298187 - MER33 DNA MER1_type -126 198 4 1753 213 37 3 chr5 186332417 186332770 -13297380 - MLT1A1 LTR MaLR 0 365 1 258 326 11 0 chr5 186333268 186333357 -13296793 + MIR SINE MIR 46 135 -73 338 236 113 19 chr5 186333745 186333851 -13296299 + MER103 DNA DNA 48 163 -3 1494 185 0 0 chr5 186333862 186334105 -13296045 + AluJo SINE Alu 47 289 -23 303 311 91 30 chr5 186334137 186334269 -13295881 - MIR3 SINE MIR -32 176 37 229 301 71 0 chr5 186334365 186334478 -13295672 - L1ME3A LINE L1 -85 6085 5965 341 311 178 6 chr5 186335257 186335437 -13294713 - MIR SINE MIR -12 250 40 1106 286 89 6 chr5 186335632 186336302 -13293848 + L2 LINE L2 2579 3313 0 225 230 40 0 chr5 186337027 186337101 -13293049 + LTR67 LTR ERVL 384 460 -97 200 165 114 51 chr5 186337144 186337223 -13292927 + L2 LINE L2 3147 3230 -42 327 25 0 0 chr5 186337260 186337300 -13292850 + (CA)n Simple_repeat Simple_repeat 1 40 0 396 332 53 16 chr5 186337502 186337689 -13292461 + MIR SINE MIR 57 250 -12 499 250 94 0 chr5 186338414 186338542 -13291608 - MIR SINE MIR -70 192 53 222 323 21 21 chr5 186338980 186339076 -13291074 + L2 LINE L2 2937 3032 -240 181 396 0 10 chr5 186339914 186340010 -13290140 - L3 LINE CR1 -111 1466 1372 770 103 0 0 chr5 186340014 186340121 -13290029 + AluSg/x SINE Alu 192 298 -12 242 298 99 65 chr5 186340178 186340390 -13289760 + L2 LINE L2 2640 2864 -450 201 74 0 0 chr5 186340390 186340417 -13289733 + (TA)n Simple_repeat Simple_repeat 2 28 0 242 298 99 65 chr5 186340417 186340466 -13289684 + L2 LINE L2 2864 2910 -404 1518 231 0 0 chr5 186340487 186340803 -13289347 - L1PB4 LINE L1 -9 6147 5832 239 339 28 0 chr5 186341395 186341504 -13288646 + L2 LINE L2 2923 3034 -238 210 91 0 0 chr5 186343017 186343050 -13287100 + (TC)n Simple_repeat Simple_repeat 2 34 0 262 284 85 70 chr5 186343092 186343293 -13286857 + MER102b DNA MER1_type 119 322 -19 181 203 174 29 chr5 186343352 186343421 -13286729 + MIR SINE MIR 184 262 0 305 230 35 0 chr5 186343746 186343833 -13286317 - MIR SINE MIR -52 210 121 296 259 0 0 chr5 186343960 186344014 -13286136 - L2 LINE L2 -255 3058 3005 2236 122 0 22 chr5 186344180 186344499 -13285651 - AluSx SINE Alu 0 312 1 463 298 154 14 chr5 186344728 186344936 -13285214 - MIR SINE MIR -6 256 20 500 248 81 86 chr5 186345093 186345291 -13284859 + MIR SINE MIR 36 232 -30 2286 88 0 0 chr5 186345685 186345969 -13284181 + AluSx SINE Alu 1 284 -28 243 306 28 0 chr5 186347111 186347183 -13282967 + MER5A DNA MER1_type 116 189 0 547 255 35 7 chr5 186347485 186347630 -13282520 - MER5A DNA MER1_type 0 189 41 217 304 0 0 chr5 186347637 186347693 -13282457 + (TG)n Simple_repeat Simple_repeat 2 57 0 1416 203 100 52 chr5 186347884 186348354 -13281796 - MER39 LTR ERV1 0 707 41 303 298 177 0 chr5 186348443 186348584 -13281566 - MIR SINE MIR -59 203 38 222 254 336 0 chr5 186349709 186349819 -13280331 + L2 LINE L2 2914 3060 -212 1855 182 51 5 chr5 186350949 186351322 -13278828 + MLT1B LTR MaLR 1 390 0 198 287 58 23 chr5 186351415 186351502 -13278648 - MIR SINE MIR -64 144 55 219 276 40 0 chr5 186351735 186351811 -13278339 + MIR SINE MIR 114 192 -70 2341 64 48 3 chr5 186352696 186352991 -13277159 + AluY SINE Alu 1 308 -3 298 356 58 0 chr5 186353384 186353488 -13276662 + MIR3 SINE MIR 77 186 -22 833 272 20 20 chr5 186353912 186354166 -13275984 - MER115 DNA AcHobo -434 259 6 357 308 195 18 chr5 186354396 186354565 -13275585 + L3 LINE CR1 1309 1507 -70 437 228 74 47 chr5 186354991 186355097 -13275053 + MER115 DNA AcHobo 531 644 -49 2067 213 34 39 chr5 186355097 186355604 -13274546 - MLT1D LTR MaLR -1 504 1 437 228 74 47 chr5 186355604 186355646 -13274504 + MER115 DNA AcHobo 644 683 -10 30 27 0 0 chr5 186355690 186355727 -13274423 + AT_rich Low_complexity Low_complexity 1 37 0 242 211 119 73 chr5 186356044 186356153 -13273997 - L2 LINE L2 0 3272 3159 213 227 227 52 chr5 186356231 186356328 -13273822 + L2 LINE L2 3159 3272 0 561 265 53 16 chr5 186356474 186356659 -13273491 - MIR SINE MIR -33 229 40 1483 169 77 4 chr5 186357483 186357755 -13272395 - AluJo SINE Alu -20 292 1 925 285 53 57 chr5 186358332 186358841 -13271309 + LTR67 LTR ERVL 51 557 0 539 310 110 45 chr5 186358875 186359210 -13270940 + L2 LINE L2 2916 3272 0 464 288 110 18 chr5 186359818 186359981 -13270169 - MIR SINE MIR -12 250 73 185 94 31 0 chr5 186360167 186360199 -13269951 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 667 284 34 52 chr5 186360482 186360731 -13269419 + MIR SINE MIR 18 256 -6 1214 139 134 8 chr5 186360875 186361113 -13269037 + LTR22 LTR ERVK 1 268 -241 793 200 29 11 chr5 186361314 186361489 -13268661 + LTR22 LTR ERVK 332 509 0 282 266 44 84 chr5 186361523 186361749 -13268401 + L2 LINE L2 2647 2863 -451 270 333 67 0 chr5 186361960 186362065 -13268085 + L2 LINE L2 3139 3250 -22 2227 165 110 17 chr5 186362139 186362661 -13267489 + MER90 LTR ERV1 1 614 0 423 0 0 0 chr5 186362834 186362881 -13267269 + (TG)n Simple_repeat Simple_repeat 2 48 0 1949 259 38 26 chr5 186364638 186365198 -13264952 + MLT1E LTR MaLR 3 609 -17 1526 207 11 11 chr5 186366012 186366370 -13263780 + L1M4 LINE L1 2320 2677 -3469 292 149 15 15 chr5 186366370 186366437 -13263713 + CT-rich Low_complexity Low_complexity 3 69 0 809 243 12 0 chr5 186366439 186366612 -13263538 - AluJb SINE Alu -1 311 137 2229 219 46 78 chr5 186366614 186366956 -13263194 + L1M4 LINE L1 2681 3033 -3113 5261 54 0 9 chr5 186366956 186367605 -13262545 + L1PA8 LINE L1 5530 6172 0 2229 219 46 78 chr5 186367605 186367816 -13262334 + L1M4 LINE L1 3033 3202 -2944 1903 151 47 3 chr5 186367816 186368115 -13262035 - AluJo SINE Alu 0 312 1 2229 219 46 78 chr5 186368115 186368367 -13261783 + L1M4 LINE L1 3202 3461 -2685 404 267 0 0 chr5 186368481 186368582 -13261568 + L1PB1 LINE L1 97 197 -6666 * 15155 181 22 15 chr5 186368579 186372578 -13257572 + L1PB1 LINE L1 1392 5511 -1356 2387 92 0 0 chr5 186372578 186372872 -13257278 + AluY SINE Alu 1 294 -17 15155 181 22 15 chr5 186372872 186374239 -13255911 + L1PB1 LINE L1 5511 6867 0 4566 194 36 84 chr5 186374232 186375631 -13254519 + L1M4 LINE L1 3438 4770 -1376 * 380 284 84 108 chr5 186376604 186377030 -13253120 - L2 LINE L2 -16 3256 2841 758 332 93 38 chr5 186377132 186377655 -13252495 - L2 LINE L2 -673 2641 2148 1930 189 49 3 chr5 186377655 186378004 -13252146 - MLT1A1 LTR MaLR 0 365 1 758 332 93 38 chr5 186378004 186378456 -13251694 - L2 LINE L2 -1166 2148 1612 253 100 25 0 chr5 186378473 186378513 -13251637 - MADE1 DNA Mariner -39 41 1 2361 110 0 0 chr5 186378745 186379054 -13251096 + AluSx SINE Alu 1 309 -3 26 30 0 0 chr5 186379670 186379703 -13250447 + AT_rich Low_complexity Low_complexity 1 33 0 1628 150 42 28 chr5 186379708 186379994 -13250156 + AluJb SINE Alu 1 290 -22 1667 167 18 11 chr5 186380223 186380529 -13249621 + AluJo SINE Alu 1 308 0 197 281 186 63 chr5 186380536 186380789 -13249361 + L2 LINE L2 1668 1951 -1363 296 266 9 9 chr5 186380810 186380919 -13249231 - L1M4 LINE L1 -1248 4898 4790 238 246 40 121 chr5 186381327 186381526 -13248624 + L2 LINE L2 3004 3186 -86 4323 159 40 26 chr5 186381543 186382314 -13247836 - LTR39 LTR ERV1 0 783 2 251 300 41 39 chr5 186383206 186383365 -13246785 + MIR SINE MIR 22 145 -63 4918 209 4 6 chr5 186383546 186384360 -13245790 - L1PB1 LINE L1 -1 6150 5339 589 249 51 97 chr5 186384360 186384617 -13245533 - MIR SINE MIR -6 256 12 967 223 130 53 chr5 186385082 186385626 -13244524 + MER34C LTR ERV1 4 542 0 582 293 50 14 chr5 186385657 186385879 -13244271 - MIR SINE MIR -12 250 21 2695 118 4 93 chr5 186385879 186386361 -13243789 - LTR12 LTR ERV1 -275 439 1 244 269 83 0 chr5 186386877 186386985 -13243165 + MLT1L LTR MaLR 37 153 -462 1982 151 0 3 chr5 186387087 186387385 -13242765 - AluJb SINE Alu -15 297 1 1184 169 19 5 chr5 186388034 186388247 -13241903 + L1MC1 LINE L1 6107 6322 -11 305 100 20 0 chr5 186388412 186388462 -13241688 + (TA)n Simple_repeat Simple_repeat 2 52 0 2001 128 0 24 chr5 186388536 186388856 -13241294 - AluSg SINE Alu 0 313 1 198 255 223 0 chr5 186388914 186389008 -13241142 - L2 LINE L2 -2 3270 3156 629 63 21 0 chr5 186391683 186391778 -13238372 + L1PA12 LINE L1 6072 6168 0 295 346 44 6 chr5 186391915 186392160 -13237990 + HAL1 LINE L1 1430 1632 -875 1769 277 92 39 chr5 186393192 186394589 -13235561 + L1MCa LINE L1 775 2449 -4158 1013 242 73 16 chr5 186394751 186395187 -13234963 - L1MEc LINE L1 -3526 3118 2683 398 312 0 22 chr5 186395186 186395417 -13234733 - L1MEc LINE L1 -4831 1711 1486 * 2155 136 0 0 chr5 186395441 186395743 -13234407 - AluSx SINE Alu -10 302 1 481 304 55 31 chr5 186396108 186396401 -13233749 - L1MC4 LINE L1 -983 7059 6760 243 0 0 0 chr5 186396432 186396459 -13233691 + (CTG)n Simple_repeat Simple_repeat 1 27 0 410 330 6 6 chr5 186397448 186397630 -13232520 - MIR SINE MIR -27 235 54 252 194 45 15 chr5 186397679 186397746 -13232404 - MER5B DNA MER1_type -73 105 37 211 284 12 41 chr5 186399586 186399755 -13230395 + CT-rich Low_complexity Low_complexity 1 164 0 434 147 9 92 chr5 186400312 186400421 -13229729 - MIR3 SINE MIR -28 180 81 195 300 88 50 chr5 186400423 186400503 -13229647 - MIR3 SINE MIR -43 165 83 211 293 0 0 chr5 186400504 186400562 -13229588 - MIR3 SINE MIR -42 166 109 23 0 0 0 chr5 186401517 186401540 -13228610 + AT_rich Low_complexity Low_complexity 1 23 0 514 296 62 37 chr5 186401748 186402072 -13228078 - L2 LINE L2 -10 3303 2972 212 339 26 0 chr5 186402370 186402485 -13227665 - L2 LINE L2 -695 2619 2502 262 197 151 59 chr5 186402486 186402638 -13227512 - L2 LINE L2 -1090 2224 2059 298 257 37 9 chr5 186403348 186403457 -13226693 + MIR SINE MIR 106 217 -45 294 264 57 25 chr5 186403545 186403704 -13226446 - LTR33 LTR ERVL -4 517 354 227 269 160 0 chr5 186403756 186403931 -13226219 - LTR33 LTR ERVL -275 246 44 220 235 39 0 chr5 186404015 186404066 -13226084 - MIR SINE MIR -71 137 85 338 288 53 30 chr5 186404155 186404287 -13225863 - MIR3 SINE MIR -62 146 12 230 284 18 55 chr5 186405105 186405214 -13224936 - MIR SINE MIR -63 145 41 335 269 59 8 chr5 186405219 186405338 -13224812 + MIR3 SINE MIR 11 135 -73 317 239 196 0 chr5 186405355 186405447 -13224703 - L2 LINE L2 -20 3293 3184 193 182 146 0 chr5 186405463 186405518 -13224632 - MIR SINE MIR -81 181 119 2298 119 3 0 chr5 186406759 186407070 -13223080 - AluSp SINE Alu -1 312 1 226 23 23 68 chr5 186407600 186407644 -13222506 + (CCCCAG)n Simple_repeat Simple_repeat 2 43 0 208 164 0 36 chr5 186407849 186407904 -13222246 + CT-rich Low_complexity Low_complexity 2 54 0 231 245 147 56 chr5 186408409 186408552 -13221598 + LTR67 LTR ERVL 398 553 -4 1788 209 32 25 chr5 186408773 186409252 -13220898 - MLT2D LTR ERVL 0 464 1 396 171 206 112 chr5 186409252 186409352 -13220798 - L1MB7 LINE L1 -30 6154 6065 1979 152 14 0 chr5 186409352 186409648 -13220502 - AluJb SINE Alu -12 300 1 396 171 206 112 chr5 186409648 186409717 -13220433 - L1MB7 LINE L1 -119 6065 5969 218 278 54 0 chr5 186411967 186412049 -13218101 + MIR SINE MIR 80 168 -40 1321 247 26 9 chr5 186412176 186412516 -13217634 + L1MD2 LINE L1 6012 6357 -2 234 307 138 18 chr5 186412919 186413144 -13217006 - L2 LINE L2 -438 2876 2625 543 250 128 6 chr5 186413632 186413796 -13216354 - MIR SINE MIR -75 187 4 354 216 45 11 chr5 186414048 186414136 -13216014 + L2 LINE L2 3182 3272 0 347 229 146 0 chr5 186414303 186414399 -13215751 - Charlie8 DNA MER1_type -2179 238 129 25 0 0 0 chr5 186414419 186414444 -13215706 + AT_rich Low_complexity Low_complexity 1 25 0 203 231 39 0 chr5 186415069 186415121 -13215029 + CT-rich Low_complexity Low_complexity 3 56 0 309 246 228 0 chr5 186415645 186415759 -13214391 - MIR SINE MIR -6 256 117 392 295 98 31 chr5 186416330 186416554 -13213596 - MIR SINE MIR -1 261 23 203 220 17 34 chr5 186416843 186416902 -13213248 + GA-rich Low_complexity Low_complexity 1 58 0 315 282 0 12 chr5 186417235 186417320 -13212830 + MIR SINE MIR 31 114 -148 741 292 69 13 chr5 186417336 186417569 -13212581 + MIR SINE MIR 16 261 -1 194 178 0 22 chr5 186417760 186417805 -13212345 - L2 LINE L2 -15 3257 3214 554 269 70 5 chr5 186417939 186418140 -13212010 - L2 LINE L2 -339 2975 2762 352 255 10 10 chr5 186418147 186418245 -13211905 + MIR SINE MIR 165 262 0 611 195 0 23 chr5 186418557 186418685 -13211465 + FLAM_A SINE Alu 18 142 0 374 287 0 41 chr5 186419167 186419289 -13210861 + MIR3 SINE MIR 66 182 -26 222 321 47 57 chr5 186419637 186419849 -13210301 + L2 LINE L2 2859 3068 -204 257 230 95 8 chr5 186420962 186421088 -13209062 + (TCTCTG)n Simple_repeat Simple_repeat 2 138 0 203 254 18 0 chr5 186421142 186421197 -13208953 + CT-rich Low_complexity Low_complexity 5 60 0 421 238 38 0 chr5 186422121 186422226 -13207924 - Tigger5 DNA MER2_type 0 2323 2215 227 186 0 0 chr5 186422218 186422261 -13207889 - Tigger5 DNA MER2_type -2268 55 13 * 344 214 0 0 chr5 186422261 186422331 -13207819 - Tigger5 DNA MER2_type 0 2323 2254 334 182 0 0 chr5 186422303 186422358 -13207792 - Tigger5 DNA MER2_type -2268 55 1 * 222 341 77 6 chr5 186422411 186422581 -13207569 - L2 LINE L2 -181 3091 2910 558 298 0 0 chr5 186422668 186422792 -13207358 + L2 LINE L2 3190 3313 0 222 62 0 0 chr5 186423912 186423944 -13206206 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2068 110 11 0 chr5 186423948 186424220 -13205930 - AluSp SINE Alu -37 276 2 198 270 10 90 chr5 186424806 186424906 -13205244 + MER5A DNA MER1_type 68 159 -30 285 337 30 30 chr5 186425117 186425286 -13204864 - MIR SINE MIR -74 188 20 321 286 45 18 chr5 186425841 186425953 -13204197 - MIR SINE MIR 0 262 148 1799 113 31 100 chr5 186426315 186426513 -13203637 - AluSx SINE Alu -15 297 128 234 116 0 0 chr5 186426513 186426556 -13203594 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1799 113 31 100 chr5 186426556 186426676 -13203474 - AluSx SINE Alu -184 128 1 440 298 48 0 chr5 186426853 186426977 -13203173 + MIR SINE MIR 83 212 -50 451 252 28 56 chr5 186427147 186427290 -13202860 - MER117 DNA MER1_type -50 147 9 561 220 110 12 chr5 186427740 186427913 -13202237 - MLT1J2 LTR MaLR -8 442 253 817 252 14 29 chr5 186430373 186430583 -13199567 + MIR SINE MIR 28 234 -28 261 257 43 0 chr5 186430694 186430764 -13199386 - MIR3 SINE MIR -50 158 86 758 234 97 9 chr5 186431198 186431424 -13198726 + MIR SINE MIR 7 252 -10 367 269 135 26 chr5 186432089 186432282 -13197868 + MIR SINE MIR 45 258 -4 2384 99 0 0 chr5 186432701 186433004 -13197146 - AluSx SINE Alu -9 303 1 259 323 38 30 chr5 186433343 186433476 -13196674 + MIR3 SINE MIR 1 134 -74 1434 232 27 25 chr5 186434996 186435362 -13194788 - MLT1K LTR MaLR -2 586 220 417 279 22 73 chr5 186435669 186435848 -13194302 - MIR SINE MIR -92 170 1 324 196 82 72 chr5 186436081 186436178 -13193972 + L2 LINE L2 3209 3306 -7 431 340 28 0 chr5 186436293 186436434 -13193716 - MIR SINE MIR -31 231 87 1072 300 89 20 chr5 186436570 186437073 -13193077 + LTR67 LTR ERVL 19 556 -1 322 198 10 73 chr5 186437293 186437389 -13192761 - MER5A DNA MER1_type -83 106 17 214 331 115 8 chr5 186437952 186438082 -13192068 + L2 LINE L2 2916 3059 -213 234 91 0 0 chr5 186438826 186438859 -13191291 + (TCC)n Simple_repeat Simple_repeat 2 34 0 296 291 35 0 chr5 186439357 186439443 -13190707 - MIR SINE MIR -88 174 86 398 294 32 8 chr5 186439563 186439689 -13190461 + MIR SINE MIR 64 192 -70 495 280 26 14 chr5 186440013 186440310 -13189840 - MER93b LTR ERV1 0 373 41 581 229 30 0 chr5 186440310 186440441 -13189709 + AluJb SINE Alu 166 300 -12 462 114 0 0 chr5 186440442 186440512 -13189638 + (GGAGAA)n Simple_repeat Simple_repeat 1 70 0 1675 162 0 15 chr5 186440533 186440798 -13189352 - AluJo SINE Alu -46 266 6 481 238 35 23 chr5 186441060 186441232 -13188918 - AluY SINE Alu -136 175 2 256 311 106 8 chr5 186441496 186441628 -13188522 + L3b LINE CR1 1319 1463 -120 334 326 54 105 chr5 186441890 186442184 -13187966 + L2 LINE L2 2986 3264 -8 538 299 17 11 chr5 186442994 186443168 -13186982 + MIR SINE MIR 12 186 -76 730 271 106 5 chr5 186444557 186444764 -13185386 + MIR SINE MIR 21 248 -14 180 255 53 96 chr5 186444829 186444923 -13185227 + L3b LINE CR1 1396 1485 -98 285 75 0 0 chr5 186445355 186445395 -13184755 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 528 234 88 18 chr5 186445410 186445581 -13184569 - MIR SINE MIR -2 260 78 316 277 80 27 chr5 186446408 186446586 -13183564 - MIR SINE MIR -38 224 39 349 302 16 16 chr5 186446754 186446880 -13183270 + L2 LINE L2 3175 3300 -13 186 43 0 0 chr5 186446880 186446903 -13183247 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 209 307 150 24 chr5 186446925 186447052 -13183098 - MIR SINE MIR 0 262 120 267 296 57 70 chr5 186447565 186447795 -13182355 - MIR SINE MIR -29 233 7 292 297 0 22 chr5 186447865 186447956 -13182194 + GA-rich Low_complexity Low_complexity 4 92 0 1485 215 51 13 chr5 186448152 186448524 -13181626 - MLT1B LTR MaLR -1 389 4 187 281 157 34 chr5 186448949 186449038 -13181112 + MIR SINE MIR 151 250 -12 486 282 47 81 chr5 186449273 186449671 -13180479 - L2 LINE L2 -114 3158 2760 2416 83 0 13 chr5 186451296 186451610 -13178540 + AluSx SINE Alu 1 310 -2 635 74 0 11 chr5 186451870 186451965 -13178185 + (CA)n Simple_repeat Simple_repeat 1 94 0 336 216 10 29 chr5 186452118 186452220 -13177930 + C-rich Low_complexity Low_complexity 3 102 0 361 314 8 24 chr5 186454382 186454506 -13175644 + MIR SINE MIR 20 141 -121 212 313 24 12 chr5 186454823 186454906 -13175244 - MIR SINE MIR -7 255 172 317 325 8 17 chr5 186455183 186455303 -13174847 + MIR3 SINE MIR 89 207 -1 562 238 131 42 chr5 186455395 186455609 -13174541 + MIR SINE MIR 30 262 0 242 263 18 0 chr5 186456751 186456808 -13173342 + MIR SINE MIR 88 145 -63 195 383 93 0 chr5 186457106 186457213 -13172937 + L2 LINE L2 3182 3298 -15 297 250 0 0 chr5 186457744 186457884 -13172266 + (TGAA)n Simple_repeat Simple_repeat 4 143 0 324 213 111 9 chr5 186458258 186458366 -13171784 + L2 LINE L2 2949 3067 -205 281 216 27 126 chr5 186459070 186459119 -13171031 + MIR SINE MIR 103 137 -125 2315 119 0 0 chr5 186459119 186459421 -13170729 + AluSg SINE Alu 1 302 -8 281 216 27 126 chr5 186459421 186459482 -13170668 + MIR SINE MIR 137 202 -60 512 293 98 10 chr5 186459824 186460029 -13170121 - MIR SINE MIR -33 229 7 649 282 51 39 chr5 186460620 186460875 -13169275 + MIR SINE MIR 4 261 -1 503 244 156 25 chr5 186460889 186460957 -13169193 + MER5A DNA MER1_type 9 67 -122 2579 47 0 3 chr5 186460957 186461255 -13168895 + AluY SINE Alu 1 297 -14 503 244 156 25 chr5 186461255 186461346 -13168804 + MER5A DNA MER1_type 67 189 0 374 272 75 27 chr5 186461385 186461532 -13168618 - MIR3 SINE MIR -4 204 51 709 321 37 4 chr5 186461642 186461885 -13168265 - L3 LINE CR1 -742 835 585 200 349 36 0 chr5 186462096 186462179 -13167971 - MIR SINE MIR -71 191 106 569 277 48 11 chr5 186512407 186512595 -13117555 + MIR SINE MIR 5 199 -63 2526 62 3 7 chr5 186512599 186512904 -13117246 - AluY SINE Alu -7 304 1 611 249 193 22 chr5 186513013 186513282 -13116868 - L2 LINE L2 -4 3309 2995 965 71 0 14 chr5 186513311 186513451 -13116699 + (GTGTG)n Simple_repeat Simple_repeat 5 142 0 271 277 97 80 chr5 186513508 186513746 -13116404 + MIR SINE MIR 21 262 0 452 222 97 26 chr5 186514328 186514627 -13115523 - MLT1J2 LTR MaLR 0 450 96 4578 141 19 40 chr5 186515048 186515932 -13114218 - L1MB3 LINE L1 -1 6182 5317 404 324 21 1 chr5 186515948 186516091 -13114059 - MIR SINE MIR -64 144 42 304 324 53 18 chr5 186516315 186516485 -13113665 + MIR SINE MIR 85 260 -2 248 285 80 46 chr5 186518024 186518129 -13112021 + MIR SINE MIR 4 117 -145 2165 112 0 0 chr5 186518129 186518434 -13111716 - AluSx SINE Alu -7 305 1 248 285 80 46 chr5 186518434 186518479 -13111671 + MIR SINE MIR 117 159 -103 472 277 85 17 chr5 186519266 186519443 -13110707 - MIR SINE MIR -57 205 17 502 289 122 0 chr5 186520577 186520757 -13109393 - MIR SINE MIR -59 203 2 201 39 0 0 chr5 186521404 186521430 -13108720 + (TA)n Simple_repeat Simple_repeat 2 27 0 203 139 23 0 chr5 186521430 186521463 -13108687 + GA-rich Low_complexity Low_complexity 8 44 0 204 255 11 128 chr5 186522023 186522117 -13108033 + MIR SINE MIR 28 110 -152 187 319 50 43 chr5 186522228 186522369 -13107781 + L3 LINE CR1 1179 1320 -257 489 34 0 0 chr5 186522489 186522548 -13107602 + (TG)n Simple_repeat Simple_repeat 2 60 0 217 222 86 37 chr5 186522792 186522873 -13107277 + MIR SINE MIR 177 261 -1 185 339 0 0 chr5 186523139 186523198 -13106952 + L3b LINE CR1 1519 1577 -6 845 262 62 13 chr5 186523590 186523815 -13106335 - MIR SINE MIR -11 251 16 395 388 8 16 chr5 186523842 186524092 -13106058 + L2 LINE L2 2825 3072 -200 371 292 225 24 chr5 186524318 186524527 -13105623 + MIR SINE MIR 2 252 -10 494 223 46 15 chr5 186524541 186524671 -13105479 + MIR SINE MIR 18 151 -111 301 327 29 34 chr5 186527029 186527234 -13102916 - L2 LINE L2 -22 3250 3047 302 191 147 0 chr5 186527834 186527902 -13102248 - MLT1K LTR MaLR -8 580 503 200 344 180 0 chr5 186528635 186528763 -13101387 + MIR SINE MIR 3 153 -109 3967 158 33 34 chr5 186529006 186529368 -13100782 - L1MB5 LINE L1 0 6174 5813 2217 114 0 0 chr5 186529368 186529676 -13100474 - AluSx SINE Alu -4 308 1 3967 158 33 34 chr5 186529676 186530041 -13100109 - L1MB5 LINE L1 -361 5813 5448 515 320 69 22 chr5 186530755 186530986 -13099164 + MIR SINE MIR 20 261 -1 316 306 129 7 chr5 186531055 186531202 -13098948 - MIR SINE MIR -76 186 22 560 195 0 18 chr5 186531547 186531660 -13098490 - MLT1C LTR MaLR 0 467 357 410 256 68 0 chr5 186531967 186532084 -13098066 + MIR SINE MIR 76 200 -62 2102 84 39 0 chr5 186532091 186532377 -13097773 + AluSx SINE Alu 1 297 -15 411 264 108 20 chr5 186532885 186533033 -13097117 - MIR SINE MIR 0 262 102 1617 146 10 63 chr5 186533160 186533484 -13096666 + AluJo SINE Alu 1 308 0 603 216 161 0 chr5 186533676 186533838 -13096312 + MER5A DNA MER1_type 1 188 -1 748 312 16 24 chr5 186534127 186534374 -13095776 + MIR SINE MIR 8 252 -10 504 282 119 5 chr5 186534491 186534693 -13095457 - MIR SINE MIR -8 254 30 237 339 74 0 chr5 186534810 186534931 -13095219 - MIR3 SINE MIR -14 194 65 491 258 24 8 chr5 186535496 186535620 -13094530 - L2 LINE L2 -1 3312 3187 256 277 30 84 chr5 186536516 186536682 -13093468 + L2 LINE L2 2596 2752 -562 653 285 20 10 chr5 186536954 186537154 -13092996 - MIR SINE MIR -10 252 51 206 294 12 35 chr5 186537155 186537240 -13092910 + GA-rich Low_complexity Low_complexity 5 87 0 378 191 60 0 chr5 186537244 186537328 -13092822 + MLT1I LTR MaLR 319 407 -2 417 179 154 92 chr5 186538025 186538220 -13091930 - MER106B DNA MER1_type 0 1059 30 2193 113 3 0 chr5 186538533 186538843 -13091307 + AluSx SINE Alu 1 311 -1 524 257 65 98 chr5 186539265 186539510 -13090640 + MIR SINE MIR 20 256 -6 324 273 90 61 chr5 186539673 186539852 -13090298 + MIR SINE MIR 34 217 -45 382 255 21 43 chr5 186539873 186540014 -13090136 - L2 LINE L2 0 3313 3176 185 195 98 61 chr5 186540162 186540244 -13089906 + MIR3 SINE MIR 82 166 -42 654 318 33 73 chr5 186540316 186540715 -13089435 + L2 LINE L2 2875 3257 -15 438 209 27 9 chr5 186541242 186541352 -13088798 - MER103 DNA DNA -44 122 11 852 156 6 12 chr5 186541998 186542171 -13087979 + GA-rich Low_complexity Low_complexity 2 173 0 313 316 23 47 chr5 186542221 186542392 -13087758 + MIR3 SINE MIR 32 198 -10 289 283 152 0 chr5 186542584 186542683 -13087467 + L2 LINE L2 3200 3313 0 361 272 34 46 chr5 186542842 186543015 -13087135 + MIR SINE MIR 18 187 -71 207 315 70 21 chr5 186543604 186543747 -13086403 + MIR SINE MIR 66 215 -47 546 327 96 36 chr5 186543818 186544295 -13085855 + MLT1K LTR MaLR 80 585 -3 368 359 64 14 chr5 186544647 186544867 -13085283 + MIR SINE MIR 20 250 -12 1770 168 23 0 chr5 186545101 186545405 -13084745 - AluJo SINE Alu -1 311 1 412 284 128 54 chr5 186545544 186545748 -13084402 + MIR3 SINE MIR 34 252 -10 1125 262 70 84 chr5 186545753 186545936 -13084214 + MLT1C LTR MaLR 1 185 -282 2317 96 0 0 chr5 186545936 186546238 -13083912 + AluSq SINE Alu 1 302 -11 1125 262 70 84 chr5 186546238 186546457 -13083693 + MLT1C LTR MaLR 185 406 -61 2097 83 37 69 chr5 186546457 186546805 -13083345 - MER1B DNA MER1_type 0 337 1 2325 79 7 0 chr5 186546805 186547108 -13083042 - AluSp SINE Alu -8 305 1 1125 262 70 84 chr5 186547108 186547177 -13082973 + MLT1C LTR MaLR 404 467 0 468 244 0 87 chr5 186547805 186547977 -13082173 - L2 LINE L2 -1 3312 3156 507 123 9 28 chr5 186548276 186548382 -13081768 + (GGGGA)n Simple_repeat Simple_repeat 3 106 0 351 287 222 5 chr5 186549517 186549733 -13080417 - L2 LINE L2 -337 2977 2715 405 289 62 39 chr5 186549762 186549970 -13080180 - MIR SINE MIR -30 232 20 319 205 7 152 chr5 186550397 186550548 -13079602 + LTR67 LTR ERVL 24 152 -405 331 343 63 11 chr5 186551910 186552085 -13078065 - MIR SINE MIR -54 208 25 186 43 0 0 chr5 186553855 186553878 -13076272 + (TGGA)n Simple_repeat Simple_repeat 4 26 0 185 294 44 0 chr5 186554010 186554078 -13076072 - L2 LINE L2 -208 3064 2994 185 262 0 0 chr5 186554424 186554466 -13075684 - MIR SINE MIR -112 150 109 261 277 28 99 chr5 186554572 186554713 -13075437 + MIR SINE MIR 16 146 -62 360 302 31 8 chr5 186554822 186554951 -13075199 + MIR SINE MIR 122 253 -9 201 247 49 37 chr5 186556129 186556210 -13073940 + MIR3 SINE MIR 81 162 -46 533 253 167 10 chr5 186556317 186556515 -13073635 + MIR SINE MIR 13 241 -21 373 240 85 0 chr5 186556973 186557102 -13073048 - L2 LINE L2 -251 3062 2923 1791 284 71 40 chr5 186557295 186557876 -13072274 - L2 LINE L2 -421 2893 2276 614 211 14 124 chr5 186557876 186558085 -13072065 - MER5A DNA MER1_type -1 188 3 1791 284 71 40 chr5 186558085 186558367 -13071783 - L2 LINE L2 -1038 2276 2004 389 242 26 129 chr5 186558481 186558616 -13071534 + MIR3 SINE MIR 23 135 -73 1906 141 0 0 chr5 186558616 186558926 -13071224 - AluSx SINE Alu 0 310 1 389 242 26 129 chr5 186558926 186558983 -13071167 + MIR3 SINE MIR 135 196 -12 238 241 0 0 chr5 186558987 186559041 -13071109 + L2 LINE L2 3020 3073 -240 185 323 75 0 chr5 186559204 186559297 -13070853 + L2 LINE L2 3113 3212 -60 1223 283 120 28 chr5 186559312 186559919 -13070231 - L2 LINE L2 -525 2789 2127 188 353 48 58 chr5 186560105 186560312 -13069838 - MIR SINE MIR -10 252 48 471 321 93 9 chr5 186560349 186560564 -13069586 - MIR SINE MIR -2 260 28 544 283 176 23 chr5 186560932 186561522 -13068628 + L2 LINE L2 2624 3313 0 402 281 118 15 chr5 186561909 186562112 -13068038 - MIR SINE MIR -34 228 5 378 287 91 7 chr5 186563046 186563189 -13066961 + MIR SINE MIR 22 176 -86 545 271 27 68 chr5 186563399 186563620 -13066530 - MLT1J LTR MaLR -4 507 296 252 339 24 54 chr5 186563672 186563840 -13066310 - L2 LINE L2 -754 2560 2398 283 214 14 14 chr5 186563872 186563942 -13066208 - MER103 DNA DNA -52 114 45 371 285 56 5 chr5 186566419 186566543 -13063607 - MIR3 SINE MIR -62 146 58 1881 195 117 24 chr5 186566543 186567005 -13063145 + MLT1D LTR MaLR 1 505 0 371 285 56 5 chr5 186567005 186567055 -13063095 - MIR3 SINE MIR -150 58 12 380 266 28 37 chr5 186567780 186567889 -13062261 - L2 LINE L2 -3 3310 3203 2040 253 32 9 chr5 186568885 186569541 -13060609 + L1MC1 LINE L1 2297 2967 -3179 * 8480 202 18 18 chr5 186569515 186572534 -13057616 + L1MC1 LINE L1 3310 6327 -6 749 300 48 24 chr5 186572542 186572879 -13057271 + L1ME LINE L1 5428 5772 -390 604 256 13 13 chr5 186573001 186573157 -13056993 + MER91A DNA MER1_type 1 156 -40 551 211 24 30 chr5 186573741 186573759 -13056391 - L1MA10 LINE L1 0 6334 6317 2052 217 55 50 chr5 186573759 186574382 -13055768 - L1ME1 LINE L1 -7 6159 5534 587 194 58 13 chr5 186574387 186574542 -13055608 + L1M4 LINE L1 5131 5292 -854 241 278 94 33 chr5 186574682 186574862 -13055288 + L3 LINE CR1 1277 1467 -110 1837 156 7 3 chr5 186575809 186576097 -13054053 + AluJb SINE Alu 12 300 -12 273 119 0 0 chr5 186576111 186576153 -13053997 + (GAAAA)n Simple_repeat Simple_repeat 4 45 0 366 268 38 45 chr5 186576328 186576485 -13053665 - MIR SINE MIR -7 255 100 199 150 25 0 chr5 186576523 186576563 -13053587 - L2 LINE L2 -78 3235 3195 243 0 0 0 chr5 186576992 186577019 -13053131 + (CAT)n Simple_repeat Simple_repeat 3 29 0 228 260 78 101 chr5 186577126 186577384 -13052766 - MLT1K LTR MaLR -14 574 323 198 303 32 70 chr5 186577628 186577813 -13052337 + L2 LINE L2 2917 3094 -178 289 194 78 78 chr5 186577866 186577969 -13052181 - L2 LINE L2 -21 3292 3190 473 241 60 0 chr5 186579930 186580046 -13050104 - LTR33 LTR ERVL -57 464 342 376 277 131 8 chr5 186580172 186580302 -13049848 - LTR33 LTR ERVL -375 146 1 2380 112 0 0 chr5 186580580 186580892 -13049258 - AluSx SINE Alu 0 312 1 233 232 128 67 chr5 186580947 186581111 -13049039 + MIR3 SINE MIR 13 186 -22 238 253 112 59 chr5 186581525 186581695 -13048455 - L2 LINE L2 -167 3105 2927 1934 149 162 8 chr5 186581756 186582126 -13048024 - MSTC LTR MaLR 0 428 2 343 314 82 52 chr5 186582562 186582888 -13047262 - MER113 DNA MER1_type? -6 515 180 258 178 168 47 chr5 186582888 186582995 -13047155 - LTR33 LTR ERVL 0 521 402 284 322 35 14 chr5 186583017 186583160 -13046990 - L1ME4a LINE L1 -11 6110 5965 279 146 0 0 chr5 186583387 186583435 -13046715 + MADE1 DNA Mariner 1 48 -32 23 0 0 0 chr5 186583960 186583983 -13046167 + AT_rich Low_complexity Low_complexity 1 23 0 404 281 79 56 chr5 186584477 186584819 -13045331 - L2 LINE L2 -739 2575 2226 275 322 110 0 chr5 186584941 186585059 -13045091 + MIR3 SINE MIR 67 197 -11 263 331 112 12 chr5 186586725 186586894 -13043256 - MIR SINE MIR -74 188 3 293 232 121 48 chr5 186587210 186587482 -13042668 + L2 LINE L2 2377 2668 -646 453 282 104 60 chr5 186587696 186588082 -13042068 + L2 LINE L2 2809 3211 -61 913 122 0 0 chr5 186588084 186588207 -13041943 - AluSq/x SINE Alu -190 123 1 643 269 133 7 chr5 186588213 186588484 -13041666 - L2 LINE L2 0 3313 3009 3279 157 153 108 chr5 186589057 186589641 -13040509 - L1MC3 LINE L1 -1 7784 7077 229 254 0 16 chr5 186589641 186589704 -13040446 - MLT1F1 LTR MaLR -453 114 53 3279 157 153 108 chr5 186589704 186590053 -13040097 - L1MC3 LINE L1 -708 7077 6745 434 253 32 0 chr5 186590104 186590258 -13039892 - L1ME4a LINE L1 0 6121 5963 2209 109 10 3 chr5 186590628 186590930 -13039220 + AluSp SINE Alu 1 304 -9 670 253 99 21 chr5 186591189 186591422 -13038728 + MIR SINE MIR 2 252 -10 456 156 33 22 chr5 186591448 186591538 -13038612 - MLT1K LTR MaLR -3 585 495 265 266 16 0 chr5 186591553 186591617 -13038533 - MLT1K LTR MaLR -339 249 185 216 251 186 80 chr5 186592555 186592754 -13037396 + L2 LINE L2 3027 3246 -26 227 31 31 0 chr5 186592759 186592791 -13037359 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 374 261 17 25 chr5 186592856 186592975 -13037175 + MIR SINE MIR 84 201 -61 399 174 0 0 chr5 186593810 186593896 -13036254 + (TGGA)n Simple_repeat Simple_repeat 1 86 0 2282 99 3 13 chr5 186594207 186594521 -13035629 + AluSx SINE Alu 1 311 -1 677 288 88 79 chr5 186594689 186595323 -13034827 + L2 LINE L2 2651 3300 -13 207 100 0 0 chr5 186595323 186595353 -13034797 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 328 330 72 58 chr5 186595422 186595853 -13034297 - L2 LINE L2 -27 3245 2809 356 250 79 29 chr5 186596840 186596980 -13033170 + MIR SINE MIR 17 163 -99 427 321 12 12 chr5 186597023 186597185 -13032965 - MIR SINE MIR -83 179 18 183 284 0 30 chr5 186597376 186597443 -13032707 + MIR SINE MIR 79 143 -65 347 289 60 27 chr5 186597449 186597598 -13032552 + L1ME LINE L1 5501 5654 -516 495 198 10 0 chr5 186597598 186597699 -13032451 - MER20 DNA MER1_type 0 219 118 614 78 0 11 chr5 186597725 186597815 -13032335 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 1588 179 21 11 chr5 186598615 186598900 -13031250 + AluJo SINE Alu 1 288 -24 33 0 0 0 chr5 186598900 186598933 -13031217 + AT_rich Low_complexity Low_complexity 1 33 0 2156 112 0 10 chr5 186598933 186599229 -13030921 + AluSc SINE Alu 1 293 -16 237 250 26 26 chr5 186599354 186599430 -13030720 + MIR SINE MIR 108 183 -79 450 0 0 0 chr5 186599648 186599769 -13030381 + (GGAAA)n Simple_repeat Simple_repeat 1 171 0 450 0 0 0 chr5 186599769 186599819 -13030331 + (GGAAA)n Simple_repeat Simple_repeat 4 53 0 699 232 42 11 chr5 186600752 186600942 -13029208 - MIR SINE MIR -64 198 3 545 277 60 16 chr5 186600944 186601128 -13029022 - MIR SINE MIR -23 239 48 368 268 85 26 chr5 186602762 186602915 -13027235 + MER63 DNA MER1_type 675 1062 0 324 0 0 0 chr5 186603222 186603258 -13026892 + (TG)n Simple_repeat Simple_repeat 2 37 0 658 276 97 14 chr5 186603323 186603672 -13026478 - L1MC4a LINE L1 -352 5818 5479 196 208 19 0 chr5 186603748 186603801 -13026349 - MIR SINE MIR -123 139 86 239 197 0 45 chr5 186604479 186604545 -13025605 + GA-rich Low_complexity Low_complexity 3 65 0 184 304 0 0 chr5 186605209 186605265 -13024885 + MIR SINE MIR 201 256 -6 1002 98 8 0 chr5 186606392 186606524 -13023626 - AluSq/x SINE Alu -179 133 1 330 271 0 10 chr5 186606770 186606866 -13023284 - MIR SINE MIR -6 256 162 1807 156 40 13 chr5 186607306 186607485 -13022665 - AluSx SINE Alu -3 309 117 393 22 0 0 chr5 186607485 186607531 -13022619 + (TG)n Simple_repeat Simple_repeat 2 47 0 1807 156 40 13 chr5 186607531 186607652 -13022498 - AluSx SINE Alu -195 117 1 387 348 0 0 chr5 186607698 186607816 -13022334 + MIR3 SINE MIR 37 154 -54 884 234 79 22 chr5 186607824 186608051 -13022099 - MLT1C LTR MaLR 0 467 228 247 220 20 0 chr5 186608046 186608096 -13022054 + MLT1C LTR MaLR 417 467 0 * 263 263 20 66 chr5 186608478 186608630 -13021520 - HAL1b LINE L1 -429 919 775 2174 108 7 0 chr5 186609095 186609382 -13020768 - AluSx SINE Alu -23 289 1 22 0 0 0 chr5 186609746 186609768 -13020382 + AT_rich Low_complexity Low_complexity 1 22 0 258 306 7 28 chr5 186609833 186609977 -13020173 + GA-rich Low_complexity Low_complexity 2 142 0 2211 110 0 23 chr5 186610781 186611082 -13019068 - AluSg SINE Alu -16 294 1 319 267 158 0 chr5 186611310 186611475 -13018675 + MIR SINE MIR 51 241 -21 633 210 103 71 chr5 186611625 186611849 -13018301 - MIR SINE MIR -11 251 21 207 232 0 0 chr5 186612547 186612603 -13017547 + GA-rich Low_complexity Low_complexity 4 59 0 258 136 0 0 chr5 186612764 186612808 -13017342 + (TTCA)n Simple_repeat Simple_repeat 3 46 0 615 269 24 0 chr5 186612942 186613109 -13017041 - MIR SINE MIR -29 233 63 283 308 50 65 chr5 186613142 186613402 -13016748 - L2 LINE L2 -188 3084 2829 212 330 73 0 chr5 186613472 186613581 -13016569 + L2 LINE L2 2688 2804 -510 382 243 54 36 chr5 186613627 186613738 -13016412 + L2 LINE L2 3159 3271 -1 528 313 41 10 chr5 186615012 186615207 -13014943 + MIR SINE MIR 47 247 -15 500 259 62 21 chr5 186616132 186616325 -13013825 + MIR SINE MIR 48 248 -14 22 0 0 0 chr5 186616528 186616550 -13013600 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 186617785 186617807 -13012343 + AT_rich Low_complexity Low_complexity 1 22 0 249 286 114 59 chr5 186618656 186618911 -13011239 + L2 LINE L2 2386 2654 -660 451 239 54 55 chr5 186618958 186619249 -13010901 - L1ME3A LINE L1 -100 6070 5712 2383 88 3 0 chr5 186619334 186619628 -13010522 + AluSc SINE Alu 1 295 -14 264 321 172 23 chr5 186619628 186619977 -13010173 + L2 LINE L2 2910 3310 -3 200 303 66 0 chr5 186620161 186620237 -13009913 - MER91C DNA MER1_type -29 111 31 282 95 0 0 chr5 186620626 186620668 -13009482 + (TCC)n Simple_repeat Simple_repeat 2 43 0 385 339 36 23 chr5 186620730 186621034 -13009116 + L2 LINE L2 3004 3311 -2 204 261 87 11 chr5 186621138 186621230 -13008920 - MIR SINE MIR -135 127 29 476 294 25 6 chr5 186621787 186621950 -13008200 - MIR SINE MIR -72 190 25 424 327 50 15 chr5 186621952 186622151 -13007999 + MIR SINE MIR 6 211 -51 266 250 38 0 chr5 186622398 186622478 -13007672 - MIR SINE MIR -60 202 120 362 257 44 0 chr5 186622715 186622828 -13007322 - L1ME4a LINE L1 -13 6108 5991 198 0 0 0 chr5 186623152 186623174 -13006976 + (A)n Simple_repeat Simple_repeat 1 22 0 245 295 43 43 chr5 186623652 186623859 -13006291 + L2 LINE L2 2842 3048 -265 1162 178 10 19 chr5 186623964 186624172 -13005978 + AluJb SINE Alu 85 290 -22 189 286 0 0 chr5 186624185 186624234 -13005916 + L2 LINE L2 3134 3182 -90 202 265 15 15 chr5 186624238 186624306 -13005844 + MIR SINE MIR 4 71 -191 488 280 23 0 chr5 186624367 186624499 -13005651 - MLT1I LTR MaLR -274 135 1 207 334 83 3 chr5 186625307 186625499 -13004651 - MIR SINE MIR -19 243 28 511 41 0 14 chr5 186625587 186625660 -13004490 + L1PB1 LINE L1 6078 6149 -2 530 170 0 0 chr5 186625746 186625840 -13004310 + L2 LINE L2 3220 3313 0 265 302 28 9 chr5 186625878 186625984 -13004166 + MIR3 SINE MIR 47 154 -54 280 206 16 0 chr5 186626521 186626584 -13003566 + MIR SINE MIR 108 171 -91 446 215 131 0 chr5 186626959 186627066 -13003084 - Charlie8 DNA MER1_type -2222 195 75 785 165 39 0 chr5 186627091 186627218 -13002932 + AluJo SINE Alu 5 136 -176 280 206 16 0 chr5 186627992 186628055 -13002095 + MIR SINE MIR 108 171 -91 517 270 101 5 chr5 186629919 186630108 -13000042 - MER63A DNA MER1_type 0 210 4 180 0 0 0 chr5 186630754 186630774 -12999376 + (A)n Simple_repeat Simple_repeat 1 20 0 2171 243 63 35 chr5 186632073 186632217 -12997933 - L1MEd LINE L1 -3139 3076 2938 1725 182 27 10 chr5 186632217 186632513 -12997637 + AluJb SINE Alu 1 301 -11 2171 243 63 35 chr5 186632513 186633207 -12996943 - L1MEd LINE L1 -3277 2938 2214 449 296 25 59 chr5 186633188 186633461 -12996689 - L1MEd LINE L1 -4831 1343 1175 * 2245 117 3 0 chr5 186633461 186633760 -12996390 - AluSx SINE Alu -10 302 3 449 296 25 59 chr5 186633760 186634115 -12996035 - L1MEd LINE L1 -4999 1175 810 196 241 35 0 chr5 186634395 186634453 -12995697 + L2 LINE L2 3000 3059 -213 515 289 68 71 chr5 186634576 186634887 -12995263 + MER102b DNA MER1_type 32 341 0 1644 162 41 3 chr5 186635036 186635326 -12994824 + L1MC2 LINE L1 6031 6331 -13 214 241 0 35 chr5 186635910 186635968 -12994182 + L2 LINE L2 3192 3247 -66 826 308 31 19 chr5 186636996 186637321 -12992829 - MER102b DNA MER1_type -10 331 3 2248 114 0 7 chr5 186637335 186637634 -12992516 + AluSq SINE Alu 1 297 -16 618 179 19 0 chr5 186638100 186638206 -12991944 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 4205 130 29 38 chr5 186638196 186638956 -12991194 + Tigger3(Golem) DNA MER2_type 2277 3029 0 211 383 39 31 chr5 186639045 186639173 -12990977 - L3 LINE CR1 -32 1545 1417 269 247 0 147 chr5 186639828 186639978 -12990172 - MER112 DNA MER1_type -100 160 33 447 184 88 16 chr5 186643556 186643681 -12986469 - MIR SINE MIR -82 180 47 355 289 99 0 chr5 186644223 186644344 -12985806 - MIR SINE MIR -81 181 49 376 277 122 19 chr5 186644885 186645098 -12985052 - MIR SINE MIR -6 256 22 700 236 4 93 chr5 186645740 186645998 -12984152 - MIR SINE MIR -24 238 4 334 324 73 11 chr5 186647326 186647608 -12982542 - L2 LINE L2 -195 3118 2802 1538 252 66 13 chr5 186647645 186648117 -12982033 + L1ME2 LINE L1 3384 3880 -2266 * 3742 212 72 46 chr5 186648103 186648720 -12981430 + L1ME2 LINE L1 4156 4755 -1409 4789 87 35 1 chr5 186648720 186649409 -12980741 + L1MA2 LINE L1 5593 6304 0 3742 212 72 46 chr5 186649409 186650213 -12979937 + L1ME2 LINE L1 4755 5642 -522 1897 161 0 34 chr5 186650213 186650535 -12979615 + AluSx SINE Alu 1 311 -1 3742 212 72 46 chr5 186650535 186651064 -12979086 + L1ME2 LINE L1 5642 6155 -9 430 284 112 79 chr5 186651173 186651263 -12978887 + L1ME LINE L1 3687 3773 -2373 1770 163 0 13 chr5 186651263 186651564 -12978586 + AluJo SINE Alu 14 310 -2 430 284 112 79 chr5 186651564 186652576 -12977574 + L1ME LINE L1 3773 4825 -1321 204 426 57 0 chr5 186652962 186653084 -12977066 + L2 LINE L2 3143 3271 -1 486 314 117 21 chr5 186653124 186653636 -12976514 + L1ME LINE L1 5264 5824 -297 32 67 0 0 chr5 186653642 186653702 -12976448 + AT_rich Low_complexity Low_complexity 1 60 0 2796 209 167 21 chr5 186654221 186654982 -12975168 + L1MC4 LINE L1 6696 7567 -475 1014 99 7 0 chr5 186655084 186655225 -12974925 + AluJb SINE Alu 171 312 0 313 213 138 0 chr5 186655225 186655319 -12974831 + L1MD3 LINE L1 7683 7789 -206 657 24 0 0 chr5 186655319 186655404 -12974746 + AluYa5/8 SINE Alu 226 310 0 975 193 5 15 chr5 186655404 186655606 -12974544 + L1MD3 LINE L1 7786 7985 -10 246 326 11 22 chr5 186655748 186655840 -12974310 - MER5A DNA MER1_type -44 145 55 219 267 181 9 chr5 186656910 186657026 -12973124 - MIR3 SINE MIR -41 167 32 329 266 85 0 chr5 186657774 186657868 -12972282 - MER5A DNA MER1_type -2 187 86 385 268 153 19 chr5 186657893 186658050 -12972100 - MER5A DNA MER1_type 0 189 12 1017 161 94 13 chr5 186658356 186658580 -12971570 + MSTB1 LTR MaLR 127 368 -64 390 176 232 8 chr5 186658771 186658896 -12971254 + L1M4 LINE L1 2841 2993 -3153 * 521 181 19 9 chr5 186658892 186658997 -12971153 + L1M4 LINE L1 3807 3912 -2234 1129 230 21 4 chr5 186660220 186660455 -12969695 + MER8 DNA MER2_type 1 239 0 366 298 64 29 chr5 186660858 186661029 -12969121 - MIR SINE MIR -13 249 73 528 264 11 39 chr5 186661528 186661706 -12968444 + MER5B DNA MER1_type 1 173 -5 387 322 0 0 chr5 186661745 186661860 -12968290 + MLT1K LTR MaLR 183 297 -291 2481 78 0 3 chr5 186662121 186662428 -12967722 + AluSp SINE Alu 1 306 -7 593 201 6 101 chr5 186662458 186662637 -12967513 + MER5B DNA MER1_type 17 178 0 216 382 58 19 chr5 186662638 186662845 -12967305 + L3 LINE CR1 1011 1225 -352 2065 154 50 28 chr5 186663117 186663539 -12966611 + MSTB1 LTR MaLR 2 432 0 762 296 20 0 chr5 186663544 186663747 -12966403 + LTR16C LTR ERVL 131 337 -154 211 293 0 17 chr5 186663752 186663810 -12966340 - L2 LINE L2 -76 3237 3181 224 293 40 0 chr5 186663973 186664048 -12966102 - MIR SINE MIR -74 188 111 245 333 32 16 chr5 186664551 186664677 -12965473 + MLT1K LTR MaLR 156 283 -305 2426 104 0 0 chr5 186664916 186665225 -12964925 - AluSx SINE Alu -3 309 1 1921 136 63 94 chr5 186665863 186666206 -12963944 + MLT2D LTR ERVL 2 354 -60 2529 56 0 10 chr5 186666206 186666511 -12963639 + AluY SINE Alu 1 302 -9 1921 136 63 94 chr5 186666511 186666551 -12963599 + MLT2D LTR ERVL 354 373 -41 414 0 0 0 chr5 186666551 186666597 -12963553 + (CA)n Simple_repeat Simple_repeat 1 46 0 1921 136 63 94 chr5 186666597 186666638 -12963512 + MLT2D LTR ERVL 373 414 0 1775 127 76 4 chr5 186666714 186666990 -12963160 + AluJo SINE Alu 1 296 -16 251 296 53 38 chr5 186667285 186667417 -12962733 - MIR SINE MIR -9 253 120 443 183 37 0 chr5 186668299 186668381 -12961769 + MER45A DNA AcHobo 60 144 -34 1848 130 14 3 chr5 186668430 186668714 -12961436 - AluJb SINE Alu -25 287 1 237 200 0 20 chr5 186668714 186668764 -12961386 + MER45A DNA AcHobo 130 178 0 370 319 37 12 chr5 186668777 186668973 -12961177 - MIR SINE MIR -45 217 14 198 323 73 10 chr5 186669378 186669474 -12960676 + MIR SINE MIR 45 146 -62 422 298 18 41 chr5 186670280 186670451 -12959699 + MIR SINE MIR 28 194 -68 428 231 35 110 chr5 186670460 186670580 -12959570 + MIR SINE MIR 38 143 -119 2013 159 0 10 chr5 186670580 186670889 -12959261 + AluJo SINE Alu 1 306 -6 428 231 35 110 chr5 186670889 186670941 -12959209 + MIR SINE MIR 143 197 -65 202 250 28 42 chr5 186671267 186671339 -12958811 + MIR SINE MIR 96 166 -96 297 271 21 10 chr5 186671642 186671738 -12958412 + LTR16B LTR ERVL 367 463 -1 2089 152 3 0 chr5 186671929 186672239 -12957911 + AluSx SINE Alu 1 311 -1 434 309 26 53 chr5 186674099 186674364 -12955786 - MIR SINE MIR -2 260 3 378 267 128 35 chr5 186674793 186674993 -12955157 - MIR SINE MIR -25 237 17 320 332 31 61 chr5 186676356 186676467 -12953683 + MIR SINE MIR 66 170 -92 1147 173 24 12 chr5 186676467 186676715 -12953435 + L1MB4 LINE L1 5930 6180 0 320 332 31 61 chr5 186676715 186676799 -12953351 + MIR SINE MIR 170 255 -7 1225 228 55 3 chr5 186677171 186677460 -12952690 + LTR40b LTR ERVL 1 304 -158 672 83 0 0 chr5 186677609 186677705 -12952445 + (TGGA)n Simple_repeat Simple_repeat 1 96 0 259 241 0 0 chr5 186678126 186678180 -12951970 + L2 LINE L2 3219 3272 0 393 177 7 7 chr5 186679102 186679246 -12950904 + GA-rich Low_complexity Low_complexity 1 144 0 633 183 146 6 chr5 186680297 186680461 -12949689 - MER53 DNA DNA -2 187 1 218 411 0 0 chr5 186681049 186681139 -12949011 + MIR SINE MIR 58 147 -61 2122 102 74 0 chr5 186681399 186681682 -12948468 - AluSc SINE Alu -3 306 3 287 293 97 79 chr5 186682027 186682368 -12947782 + L2 LINE L2 2926 3272 0 203 182 0 0 chr5 186683049 186683082 -12947068 + (CA)n Simple_repeat Simple_repeat 1 33 0 2146 165 103 0 chr5 186683380 186683816 -12946334 + MER31A LTR ERV1 1 481 -4 2638 80 95 5 chr5 186684747 186685158 -12944992 - LTR7 LTR ERV1 -2 448 1 2352 94 51 0 chr5 186685158 186685529 -12944621 - HERVH LTR ERV1 0 7713 7324 1306 146 18 0 chr5 186685529 186685748 -12944402 - HERVH LTR ERV1 -1894 5819 5597 3117 172 37 32 chr5 186685748 186686404 -12943746 - HERVH LTR ERV1 -2567 5146 4488 3376 97 4 6 chr5 186686406 186686909 -12943241 - HERVH LTR ERV1 -3720 3993 3492 * 19104 100 64 42 chr5 186686899 186690120 -12940030 - HERVH LTR ERV1 -4423 3290 1 2488 95 100 5 chr5 186690122 186690531 -12939619 - LTR7 LTR ERV1 -2 448 1 223 233 100 22 chr5 186691310 186691400 -12938750 - MIR3 SINE MIR -10 198 102 481 298 30 0 chr5 186691458 186691589 -12938561 - MIR SINE MIR -56 206 72 373 316 97 54 chr5 186692248 186692876 -12937274 - L2 LINE L2 -8 3264 2612 417 325 62 25 chr5 186694260 186694420 -12935730 - MIR SINE MIR -14 248 83 782 260 18 18 chr5 186694466 186694685 -12935465 - MER20 DNA MER1_type 0 219 1 261 184 0 0 chr5 186694938 186694987 -12935163 + MER5B DNA MER1_type 1 49 -129 333 298 29 12 chr5 186695470 186695641 -12934509 + (TG)n Simple_repeat Simple_repeat 2 175 0 226 297 40 63 chr5 186695689 186695911 -12934239 - L2 LINE L2 -224 3048 2832 325 210 0 0 chr5 186696136 186696198 -12933952 + AluJ/FLAM SINE Alu 1 62 -240 423 233 148 29 chr5 186696565 186696775 -12933375 - L2 LINE L2 -4 3309 3075 2572 134 19 21 chr5 186696848 186697319 -12932831 + L1MA3 LINE L1 5821 6290 -15 292 319 156 34 chr5 186697401 186697696 -12932454 - L2 LINE L2 -27 3245 2915 543 317 85 27 chr5 186697974 186698267 -12931883 + L2 LINE L2 3003 3312 -1 2042 134 3 0 chr5 186698661 186698953 -12931197 + AluSx SINE Alu 1 293 -19 359 185 171 52 chr5 186699005 186699149 -12931001 - MIR SINE MIR -62 146 9 401 302 50 77 chr5 186700276 186700456 -12929694 + L2 LINE L2 2984 3152 -161 2191 145 0 0 chr5 186700456 186700767 -12929383 - AluSx SINE Alu -1 311 1 401 302 50 77 chr5 186700767 186700924 -12929226 + L2 LINE L2 3152 3312 -1 540 251 15 62 chr5 186700958 186701153 -12928997 - MER5A DNA MER1_type -3 186 1 2229 122 0 0 chr5 186701358 186701661 -12928489 + AluSx SINE Alu 1 303 -9 285 299 56 19 chr5 186701733 186701840 -12928310 - L2 LINE L2 -1 3312 3202 1145 237 96 47 chr5 186702539 186703130 -12927020 - Charlie7 DNA MER1_type -46 2566 1947 421 196 168 28 chr5 186703140 186703283 -12926867 - Charlie7 DNA MER1_type -2122 490 328 418 262 89 56 chr5 186703311 186703525 -12926625 - Charlie7 DNA MER1_type -2353 259 39 206 269 197 78 chr5 186703907 186704100 -12926050 + MIR SINE MIR 47 262 0 218 243 27 0 chr5 186704656 186704730 -12925420 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 559 215 45 68 chr5 186704775 186704952 -12925198 - MIR SINE MIR -13 249 77 225 236 36 0 chr5 186705336 186705391 -12924759 + CT-rich Low_complexity Low_complexity 1 57 0 274 167 21 0 chr5 186705998 186706046 -12924104 - MIR SINE MIR -60 148 100 279 208 0 0 chr5 186707405 186707458 -12922692 - MIR SINE MIR -114 148 96 317 300 72 5 chr5 186709037 186709210 -12920940 + L1MC4a LINE L1 5675 5849 -298 541 279 101 0 chr5 186709292 186709471 -12920679 + MIR SINE MIR 66 262 0 203 184 0 0 chr5 186709534 186709572 -12920578 + (TA)n Simple_repeat Simple_repeat 2 39 0 571 172 234 0 chr5 186709664 186709809 -12920341 - L1MC1 LINE L1 0 6333 6155 209 257 179 36 chr5 186710286 186710426 -12919724 + MIR SINE MIR 35 194 -68 1934 156 16 10 chr5 186710736 186711044 -12919106 + AluJb SINE Alu 3 312 0 311 343 76 45 chr5 186712477 186712833 -12917317 + L2 LINE L2 2905 3271 -1 351 229 283 10 chr5 186712884 186713078 -12917072 + MIR SINE MIR 16 259 -3 1195 287 36 25 chr5 186713144 186713593 -12916557 - LTR16B LTR ERVL 0 464 11 1035 199 83 15 chr5 186714454 186714783 -12915367 - MSTD LTR MaLR 0 396 3 2224 125 6 3 chr5 186714826 186715138 -12915012 + AluSq SINE Alu 1 313 0 288 212 61 30 chr5 186715140 186715239 -12914911 - MIR SINE MIR -128 134 33 405 342 54 0 chr5 186715821 186715970 -12914180 - MIR SINE MIR -57 205 49 1357 108 75 14 chr5 186716416 186716628 -12913522 + AluSp SINE Alu 86 310 -3 26 50 0 0 chr5 186716744 186716784 -12913366 + AT_rich Low_complexity Low_complexity 1 40 0 195 42 0 0 chr5 186717041 186717065 -12913085 + (A)n Simple_repeat Simple_repeat 1 24 0 215 292 62 0 chr5 186718252 186718317 -12911833 - L2 LINE L2 -18 3254 3186 271 254 0 0 chr5 186719026 186719089 -12911061 + (TG)n Simple_repeat Simple_repeat 2 64 0 810 268 47 4 chr5 186719144 186719379 -12910771 + MIR SINE MIR 18 262 0 279 291 51 60 chr5 186719383 186719500 -12910650 + L2 LINE L2 3137 3252 -20 237 274 107 12 chr5 186719672 186719756 -12910394 + MIR SINE MIR 20 111 -97 850 271 0 5 chr5 186720494 186720682 -12909468 + MER58A DNA MER1_type 1 187 -37 2348 68 0 0 chr5 186720700 186721006 -12909144 - AluY SINE Alu 0 306 1 22 70 0 0 chr5 186721427 186721470 -12908680 + AT_rich Low_complexity Low_complexity 1 43 0 7604 42 0 0 chr5 186721470 186722492 -12907658 - L1PA5 LINE L1 -8 6146 5109 5197 48 0 0 chr5 186722492 186723123 -12907027 + L1PA5 LINE L1 4476 5106 -1040 187 161 0 0 chr5 186723202 186723233 -12906917 - L2 LINE L2 -217 3055 3025 207 100 0 0 chr5 186723296 186723326 -12906824 + (TAA)n Simple_repeat Simple_repeat 1 30 0 2183 122 0 0 chr5 186723329 186723623 -12906527 + AluSq SINE Alu 1 294 -19 440 294 49 31 chr5 186723712 186723875 -12906275 - MIR SINE MIR -80 182 17 295 260 164 27 chr5 186724353 186724499 -12905651 - L2 LINE L2 0 3272 3107 457 217 47 0 chr5 186726029 186726135 -12904015 + MIR SINE MIR 64 174 -88 4017 150 40 48 chr5 186726135 186726408 -12903742 - L1MB8 LINE L1 0 6178 5904 441 0 0 0 chr5 186726408 186726457 -12903693 + (TTGG)n Simple_repeat Simple_repeat 2 50 0 2026 112 33 0 chr5 186726457 186726733 -12903417 - AluSq SINE Alu -28 285 1 4017 150 40 48 chr5 186726733 186726846 -12903304 - L1MB8 LINE L1 -273 5905 5793 237 65 0 0 chr5 186726846 186726877 -12903273 + (TA)n Simple_repeat Simple_repeat 1 31 0 4017 150 40 48 chr5 186726877 186727319 -12902831 - L1MB8 LINE L1 -385 5793 5355 306 65 98 0 chr5 186727619 186727711 -12902439 + (TA)n Simple_repeat Simple_repeat 1 101 0 316 211 99 0 chr5 186727712 186727783 -12902367 - HsTC2 DNA Tc2 -1820 78 1 2128 96 24 7 chr5 186729115 186729407 -12900743 - AluSx SINE Alu -15 297 1 1589 170 6 43 chr5 186729564 186729599 -12900551 - AluJb SINE Alu 0 312 277 213 39 0 0 chr5 186729599 186729625 -12900525 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1589 170 6 43 chr5 186729625 186729913 -12900237 - AluJb SINE Alu -35 277 1 282 384 63 5 chr5 186730212 186730402 -12899748 + MIR3 SINE MIR 3 203 -5 222 279 16 0 chr5 186730939 186731000 -12899150 - L2 LINE L2 -71 3201 3140 2050 150 0 0 chr5 186731595 186731902 -12898248 - AluSq SINE Alu -6 307 1 24 32 0 0 chr5 186732748 186732779 -12897371 + AT_rich Low_complexity Low_complexity 1 31 0 622 299 62 17 chr5 186732951 186733192 -12896958 - MIR SINE MIR 0 262 11 254 271 139 16 chr5 186733704 186733826 -12896324 - MIR SINE MIR -1 261 125 205 231 39 0 chr5 186733841 186733893 -12896257 + MIR SINE MIR 114 167 -95 408 314 70 14 chr5 186734160 186734373 -12895777 - MIR SINE MIR -37 225 1 230 346 39 0 chr5 186737236 186737340 -12892810 + L3 LINE CR1 637 744 -833 2356 101 0 7 chr5 186737474 186737782 -12892368 + AluSx SINE Alu 5 310 -2 2015 117 103 34 chr5 186737913 186738264 -12891886 + THE1C LTR MaLR 1 375 0 2269 89 14 3 chr5 186738334 186738625 -12891525 + AluSc SINE Alu 1 294 -15 43 64 0 0 chr5 186738821 186738899 -12891251 + AT_rich Low_complexity Low_complexity 1 78 0 717 185 0 8 chr5 186739795 186739914 -12890236 + MER68 LTR ERV1 445 562 0 230 271 213 25 chr5 186739926 186740048 -12890102 + MER5B DNA MER1_type 1 145 -33 2438 116 135 5 chr5 186740275 186740654 -12889496 + MSTA LTR MaLR 1 428 0 222 247 12 69 chr5 186741962 186742125 -12888025 + MIR SINE MIR 31 221 -41 195 279 163 41 chr5 186742177 186742324 -12887826 - MIR3 SINE MIR -2 206 42 664 267 39 52 chr5 186743291 186743496 -12886654 - MIR SINE MIR -30 232 28 2148 109 0 0 chr5 186743496 186743805 -12886345 + AluSq SINE Alu 1 309 0 664 267 39 52 chr5 186743805 186743830 -12886320 - MIR SINE MIR -234 28 4 403 250 98 81 chr5 186744046 186744282 -12885868 + MIR SINE MIR 13 252 -10 414 322 14 21 chr5 186745275 186745418 -12884732 + L2 LINE L2 3172 3313 0 691 270 52 0 chr5 186745488 186745662 -12884488 + MIR SINE MIR 31 213 -49 2231 89 0 0 chr5 186745662 186745972 -12884178 + AluY SINE Alu 1 310 0 601 257 33 0 chr5 186746114 186746266 -12883884 + MER103 DNA DNA 8 164 -2 1721 175 45 0 chr5 186746368 186746659 -12883491 + AluJb SINE Alu 2 305 -7 2006 126 0 14 chr5 186746793 186747124 -12883026 - AluSx SINE Alu 0 327 1 1930 149 7 7 chr5 186747127 186747429 -12882721 - AluSx SINE Alu -10 302 1 2242 135 39 6 chr5 186747647 186748002 -12882148 - MLT1B LTR MaLR 0 390 24 2298 103 0 0 chr5 186748136 186748426 -12881724 - AluSc SINE Alu -19 290 1 2975 111 36 73 chr5 186748941 186749446 -12880704 - LTR19A LTR ERV1 0 486 1 5192 133 68 31 chr5 186750210 186750630 -12879520 + MER4D LTR ERV1 1 404 -499 2230 122 0 0 chr5 186750630 186750933 -12879217 - AluSx SINE Alu -7 305 3 5192 133 68 31 chr5 186750933 186751383 -12878767 + MER4D LTR ERV1 404 903 0 1856 163 3 0 chr5 186751488 186751815 -12878335 - AluSx SINE Alu 0 328 1 1612 146 20 51 chr5 186751829 186752123 -12878027 - AluJb SINE Alu -27 285 1 2207 132 0 0 chr5 186752383 186752694 -12877456 + AluSx SINE Alu 1 311 -1 4266 138 6 20 chr5 186752714 186753238 -12876912 + MER41B LTR ERV1 1 516 -119 2241 123 0 0 chr5 186753238 186753540 -12876610 - AluSx SINE Alu -10 302 1 4266 138 6 20 chr5 186753540 186753659 -12876491 + MER41B LTR ERV1 516 635 0 2299 113 0 0 chr5 186753971 186754273 -12875877 - AluSq SINE Alu -11 302 1 664 283 6 17 chr5 186754295 186754468 -12875682 - MLT1F LTR MaLR -371 171 1 2223 194 97 13 chr5 186754512 186754985 -12875165 - MLT2B1 LTR ERVL -6 514 2 472 260 40 58 chr5 186755013 186755186 -12874964 + MLT1K LTR MaLR 82 251 -337 30 27 0 0 chr5 186755934 186755971 -12874179 + AT_rich Low_complexity Low_complexity 1 37 0 1128 128 0 0 chr5 186756702 186756881 -12873269 + (CCA)n Simple_repeat Simple_repeat 1 179 0 204 313 80 18 chr5 186756936 186757048 -12873102 + MIR SINE MIR 47 165 -97 289 200 47 47 chr5 186758079 186758164 -12871986 - MER5A DNA MER1_type -96 93 9 356 226 157 17 chr5 186758639 186758754 -12871396 + MIR SINE MIR 26 156 -106 258 262 219 18 chr5 186759420 186759584 -12870566 - MIR SINE MIR -14 248 52 845 284 128 55 chr5 186759693 186760324 -12869826 - HAL1 LINE L1 -1830 677 1 180 0 0 0 chr5 186760347 186760367 -12869783 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 2270 103 3 16 chr5 186760371 186760683 -12869467 - AluSx SINE Alu -4 308 1 182 191 21 0 chr5 186760849 186760896 -12869254 + GA-rich Low_complexity Low_complexity 3 50 0 2187 142 0 0 chr5 186761582 186761893 -12868257 - AluSx SINE Alu -1 311 1 23 39 0 39 chr5 186763512 186763530 -12866620 + AT_rich Low_complexity Low_complexity 1 18 -32 1714 108 104 8 chr5 186763530 186763813 -12866337 - AluJb SINE Alu 0 308 1 23 39 0 39 chr5 186763813 186763845 -12866305 + AT_rich Low_complexity Low_complexity 18 50 0 234 178 0 0 chr5 186764374 186764419 -12865731 + L1MC4 LINE L1 6659 6703 -1339 228 206 0 26 chr5 186764377 186764455 -12865695 - L1MD3 LINE L1 -1327 6703 6612 * 2158 113 7 3 chr5 186765676 186765969 -12864181 - AluSx SINE Alu -18 294 1 237 33 0 0 chr5 186766079 186766109 -12864041 + (TC)n Simple_repeat Simple_repeat 2 31 0 * 240 35 0 0 chr5 186766108 186766137 -12864013 + (TA)n Simple_repeat Simple_repeat 2 30 0 2100 124 0 14 chr5 186766137 186766427 -12863723 - AluSx SINE Alu -26 286 1 24 32 0 0 chr5 186766428 186766459 -12863691 + AT_rich Low_complexity Low_complexity 1 31 0 3914 191 66 14 chr5 186766851 186767685 -12862465 - L1MB8 LINE L1 0 6178 5286 2341 68 0 0 chr5 186767685 186768002 -12862148 - AluSc SINE Alu 0 317 1 3914 191 66 14 chr5 186768002 186768055 -12862095 - L1MB8 LINE L1 -892 5286 5237 2048 136 0 20 chr5 186768204 186768506 -12861644 + AluSx SINE Alu 1 296 -16 1477 132 57 9 chr5 186768685 186768913 -12861237 - AluSg/x SINE Alu -8 304 66 5504 90 4 6 chr5 186768990 186769721 -12860429 - L1MA2 LINE L1 0 6304 5575 286 288 47 58 chr5 186770234 186770425 -12859725 + MER5A DNA MER1_type 1 189 0 231 36 0 0 chr5 186770433 186770461 -12859689 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2099 131 0 10 chr5 186770567 186770873 -12859277 + AluSx SINE Alu 1 303 -9 446 288 52 52 chr5 186771194 186771670 -12858480 - L1MC5 LINE L1 -34 7927 7452 983 292 30 36 chr5 186771773 186772304 -12857846 + L1MC4a LINE L1 6412 6939 -869 1016 217 72 85 chr5 186772350 186772524 -12857626 + L1MC5 LINE L1 7358 7533 -428 1925 156 6 16 chr5 186772524 186772838 -12857312 + AluJb SINE Alu 1 311 -1 1016 217 72 85 chr5 186772838 186773197 -12856953 + L1MC5 LINE L1 7533 7886 -75 2398 89 7 0 chr5 186773197 186773500 -12856650 - AluSp SINE Alu -8 305 1 1016 217 72 85 chr5 186773500 186773519 -12856631 + L1MC5 LINE L1 7886 7904 -57 23 0 0 0 chr5 186773919 186773942 -12856208 + AT_rich Low_complexity Low_complexity 1 23 0 2320 102 0 6 chr5 186773942 186774276 -12855874 - L1PB1 LINE L1 0 6151 5820 1384 68 21 0 chr5 186774278 186774470 -12855680 + L1PB1 LINE L1 5611 5806 -345 1581 187 52 38 chr5 186775506 186775875 -12854275 - MLT1A2 LTR MaLR 0 374 1 2003 132 54 3 chr5 186776083 186776378 -12853772 + AluSg SINE Alu 1 310 0 2354 87 0 0 chr5 186777902 186778202 -12851948 - AluSg SINE Alu -10 300 1 1729 250 85 25 chr5 186778294 186778467 -12851683 - HsTC2a DNA Tc2 -1161 739 578 1795 116 102 4 chr5 186778467 186778742 -12851408 - AluSx SINE Alu -10 302 1 1729 250 85 25 chr5 186778742 186779203 -12850947 - HsTC2a DNA Tc2 -1322 578 67 1529 109 5 18 chr5 186779205 186779426 -12850724 - AluSg SINE Alu -92 218 1 716 253 103 0 chr5 186780238 186780471 -12849679 - MIR SINE MIR -4 258 2 181 343 19 19 chr5 186780477 186780582 -12849568 - MIR SINE MIR -70 192 88 2837 10 0 0 chr5 186780933 186781244 -12848906 + AluYa5 SINE Alu 1 311 0 21 0 0 0 chr5 186781897 186781918 -12848232 + AT_rich Low_complexity Low_complexity 1 21 0 321 289 55 39 chr5 186782151 186782279 -12847871 + L1ME LINE L1 254 383 -5687 1803 180 0 3 chr5 186782443 186782738 -12847412 - AluJb SINE Alu -18 294 1 363 44 0 0 chr5 186782960 186783005 -12847145 + (A)n Simple_repeat Simple_repeat 1 45 0 712 248 96 65 chr5 186783039 186783510 -12846640 + L1ME LINE L1 704 1159 -5102 180 0 0 0 chr5 186783510 186783530 -12846620 + (CA)n Simple_repeat Simple_repeat 2 21 0 712 248 96 65 chr5 186783530 186783931 -12846219 + L1ME LINE L1 1159 1657 -4604 245 115 0 19 chr5 186784485 186784537 -12845613 + (CCCCG)n Simple_repeat Simple_repeat 4 54 0 312 322 79 83 chr5 186784558 186785077 -12845073 - L1M2 LINE L1 -5432 1417 901 28 0 0 0 chr5 186785320 186785348 -12844802 + GC_rich Low_complexity Low_complexity 1 28 0 310 324 63 9 chr5 186785419 186785530 -12844620 - L2 LINE L2 -1 3271 3155 418 185 194 28 chr5 186785685 186785793 -12844357 - L2 LINE L2 0 3313 3188 206 303 67 51 chr5 186785789 186785984 -12844166 - L2 LINE L2 -254 3018 2821 * 214 276 69 0 chr5 186786788 186786846 -12843304 - MIR SINE MIR -76 132 71 303 344 27 38 chr5 186787614 186787720 -12842430 - MIR SINE MIR -13 249 143 186 43 0 0 chr5 186787720 186787743 -12842407 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2124 102 14 0 chr5 186787745 186788029 -12842121 - AluSx SINE Alu -24 288 1 303 344 27 38 chr5 186788029 186788105 -12842045 - MIR SINE MIR -120 142 66 747 252 110 38 chr5 186788418 186788736 -12841414 - MER77 LTR ERV1 -6 599 259 2310 90 0 3 chr5 186789059 186789359 -12840791 + AluY SINE Alu 1 299 -12 1723 172 6 41 chr5 186789501 186789815 -12840335 + 7SLRNA srpRNA srpRNA 1 303 -17 22 35 0 0 chr5 186790098 186790127 -12840023 + AT_rich Low_complexity Low_complexity 1 29 0 557 215 36 99 chr5 186790412 186790635 -12839515 - L1ME1 LINE L1 -5 6161 5953 1664 191 14 0 chr5 186790928 186791084 -12839066 - AluJb SINE Alu -25 287 124 252 0 0 0 chr5 186791084 186791112 -12839038 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1664 191 14 0 chr5 186791112 186791238 -12838912 - AluJb SINE Alu -188 124 1 780 119 32 8 chr5 186791990 186792116 -12838034 - FLAM_A SINE Alu 0 133 5 1310 214 43 48 chr5 186792131 186792529 -12837621 - MLT1C LTR MaLR -71 396 1 254 172 94 16 chr5 186792569 186792633 -12837517 - MIR SINE MIR -57 205 137 16217 122 16 19 chr5 186792878 186793720 -12836430 - L1PA10 LINE L1 -5 6478 5635 2255 109 0 0 chr5 186793720 186794013 -12836137 - AluSg SINE Alu -17 293 1 16217 122 16 19 chr5 186794013 186795571 -12834579 - L1PA10 LINE L1 -848 5635 4087 2034 154 3 0 chr5 186795571 186795877 -12834273 - AluSx SINE Alu -5 307 1 16217 122 16 19 chr5 186795877 186796997 -12833153 - L1PA10 LINE L1 -2396 4087 2965 1271 165 8 0 chr5 186797097 186797334 -12832816 - L1P LINE L1 -1852 4294 4056 1773 148 10 26 chr5 186797532 186797842 -12832308 + AluJb SINE Alu 1 305 -7 736 102 23 0 chr5 186797894 186798022 -12832128 + Tigger2 DNA MER2_type 187 317 -2401 4097 103 41 20 chr5 186798026 186798683 -12831467 + Tigger2 DNA MER2_type 1306 1976 -742 11062 175 47 11 chr5 186800008 186802501 -12827649 - L1P LINE L1 -2794 3352 769 1183 183 8 4 chr5 186802497 186802732 -12827418 - L1PA10 LINE L1 -5632 243 8 * 25 0 0 0 chr5 186803604 186803629 -12826521 + AT_rich Low_complexity Low_complexity 1 25 0 1541 189 29 7 chr5 186803629 186803910 -12826240 - AluJb SINE Alu -25 287 1 350 349 215 15 chr5 186803961 186804351 -12825799 + L2 LINE L2 2805 3272 0 9819 180 57 46 chr5 186805176 186807566 -12822584 - Cheshire DNA MER1_type -3 2417 1 286 340 21 0 chr5 186807784 186807881 -12822269 - L2 LINE L2 -448 2866 2768 28 48 0 0 chr5 186808104 186808146 -12822004 + AT_rich Low_complexity Low_complexity 1 42 0 2270 89 14 3 chr5 186808435 186808727 -12821423 - AluSc SINE Alu -14 295 1 521 304 83 11 chr5 186808788 186808969 -12821181 - MIR SINE MIR -62 200 7 5400 128 30 27 chr5 186809616 186810583 -12819567 - L1MC1 LINE L1 -1 6332 5363 3880 120 81 14 chr5 186810583 186811276 -12818874 - Tigger2 DNA MER2_type 0 2718 1980 4097 103 41 20 chr5 186812158 186812815 -12817335 - Tigger2 DNA MER2_type -742 1976 1306 1293 146 93 43 chr5 186812819 186812999 -12817151 - Tigger2 DNA MER2_type -2401 317 115 1919 132 6 26 chr5 186812999 186813310 -12816840 - AluJb SINE Alu -7 305 1 1293 146 93 43 chr5 186813310 186813431 -12816719 - Tigger2 DNA MER2_type -2603 115 1 4786 203 30 63 chr5 186813432 186814016 -12816134 - L1MC1 LINE L1 -784 5362 4760 1380 206 93 16 chr5 186814016 186814381 -12815769 - MSTD LTR MaLR -2 394 2 4786 203 30 63 chr5 186814381 186815390 -12814760 - L1MC1 LINE L1 -1386 4760 3822 293 262 19 19 chr5 186815398 186815501 -12814649 + CT-rich Low_complexity Low_complexity 1 103 0 21 0 0 0 chr5 186815684 186815705 -12814445 + AT_rich Low_complexity Low_complexity 1 21 0 28 61 0 0 chr5 186816757 186816806 -12813344 + AT_rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr5 186817185 186817214 -12812936 + AT_rich Low_complexity Low_complexity 1 29 0 486 188 295 13 chr5 186817223 186817372 -12812778 - AluYa5 SINE Alu -18 293 103 1952 134 178 6 chr5 186817824 186818189 -12811961 - MSTA LTR MaLR 0 428 1 1390 45 11 0 chr5 186818478 186818657 -12811493 - L1PA8 LINE L1 0 6172 5992 238 336 118 17 chr5 186819189 186819308 -12810842 - MIR SINE MIR -51 211 81 27 0 0 0 chr5 186819356 186819383 -12810767 + AT_rich Low_complexity Low_complexity 1 27 0 250 109 328 0 chr5 186819427 186819491 -12810659 + L1MA4 LINE L1 6211 6295 -5 205 258 0 16 chr5 186819596 186819658 -12810492 + (CAAAC)n Simple_repeat Simple_repeat 2 62 0 2562 57 0 0 chr5 186819859 186820160 -12809990 + AluY SINE Alu 1 301 -10 189 0 0 0 chr5 186820834 186820855 -12809295 + (TA)n Simple_repeat Simple_repeat 1 21 0 225 288 0 17 chr5 186821286 186821345 -12808805 - MER5C DNA MER1_type -249 75 18 2142 110 0 0 chr5 186822897 186823196 -12806954 + AluSx SINE Alu 3 301 -11 198 103 0 0 chr5 186823689 186823718 -12806432 + (TTC)n Simple_repeat Simple_repeat 2 30 0 5545 59 1 6 chr5 186823756 186824466 -12805684 - L1PA7 LINE L1 -2 6467 5761 31264 102 21 24 chr5 186824470 186829878 -12800272 - L1PA7 LINE L1 -676 5807 424 25 19 8 0 chr5 186831364 186831438 -12798712 + AT_rich Low_complexity Low_complexity 1 32 0 2405 234 64 5 chr5 186832365 186832990 -12797160 - L1MC4 LINE L1 -143 7899 7238 939 228 23 0 chr5 186832995 186833214 -12796936 - L1MC4 LINE L1 -958 7084 6861 195 350 73 29 chr5 186833765 186833902 -12796248 + MIR SINE MIR 88 230 -32 4820 137 51 6 chr5 186834198 186835015 -12795135 + L1PA16 LINE L1 5313 6166 0 189 260 169 0 chr5 186835646 186835723 -12794427 - MIR3 SINE MIR -11 197 108 186 103 0 0 chr5 186835917 186835946 -12794204 + (T)n Simple_repeat Simple_repeat 1 29 0 653 215 57 14 chr5 186836798 186837007 -12793143 - L1MC5 LINE L1 -37 7924 7707 293 177 99 106 chr5 186838197 186838338 -12791812 + HAL1 LINE L1 286 425 -2082 1985 252 87 35 chr5 186838456 186838513 -12791637 + HAL1 LINE L1 859 912 -1595 1597 125 31 21 chr5 186838513 186838801 -12791349 + L1MD2 LINE L1 6067 6357 -2 1985 252 87 35 chr5 186838801 186839544 -12790606 + HAL1 LINE L1 912 1701 -806 674 247 160 82 chr5 186839599 186840254 -12789896 + HAL1 LINE L1 1802 2507 0 286 319 96 64 chr5 186841583 186841834 -12788316 - MIR SINE MIR -1 261 3 207 0 0 0 chr5 186841859 186841882 -12788268 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 347 230 3 58 chr5 186842375 186842702 -12787448 + (TTATA)n Simple_repeat Simple_repeat 1 308 0 2161 111 3 3 chr5 186843063 186843361 -12786789 - AluSx SINE Alu -14 298 1 202 174 174 0 chr5 186844579 186844625 -12785525 + L2 LINE L2 3259 3312 -1 225 0 0 0 chr5 186844748 186844773 -12785377 + (CA)n Simple_repeat Simple_repeat 2 26 0 24 77 0 0 chr5 186845441 186845493 -12784657 + AT_rich Low_complexity Low_complexity 1 52 0 323 250 135 20 chr5 186845541 186845689 -12784461 + L1ME4a LINE L1 5956 6120 -1 3422 208 51 33 chr5 186846031 186846958 -12783192 - L1ME1 LINE L1 -31 6135 5194 365 60 0 0 chr5 186846958 186847008 -12783142 - L1PA6 LINE L1 0 6154 6105 6662 116 34 23 chr5 186847009 186849308 -12780842 - L1P2 LINE L1 -568 5586 1 3536 228 38 20 chr5 186849305 186850332 -12779818 - L1ME1 LINE L1 -943 5203 4155 * 1630 159 11 0 chr5 186850332 186850596 -12779554 - AluSx SINE Alu -2 310 44 3536 228 38 20 chr5 186850596 186850610 -12779540 - L1ME1 LINE L1 -1991 4155 4143 609 267 51 21 chr5 186852102 186852338 -12777812 - L1ME3A LINE L1 -225 5945 5703 503 273 63 54 chr5 186852362 186852461 -12777689 - L1ME3A LINE L1 -555 5607 5510 718 180 236 0 chr5 186852461 186852639 -12777511 - MER58A DNA MER1_type 0 224 5 503 273 63 54 chr5 186852639 186852941 -12777209 - L1ME3A LINE L1 -652 5510 5200 1197 296 75 26 chr5 186853082 186853623 -12776527 - L1MC4a LINE L1 -1753 6055 5465 997 42 0 0 chr5 186853623 186853741 -12776409 - L1PA7 LINE L1 -11 6143 6026 1197 296 75 26 chr5 186853741 186853958 -12776192 - L1MC4a LINE L1 -2343 5465 5260 6144 222 106 26 chr5 186854001 186856726 -12773424 - L1ME1 LINE L1 -284 5865 2915 * 38944 66 26 3 chr5 186856719 186862759 -12767391 - L1PA5 LINE L1 0 6154 4 1165 224 91 24 chr5 186862766 186863216 -12766934 - L1ME1 LINE L1 -3188 2941 2462 768 221 41 32 chr5 186863233 186863467 -12766683 - L1M4 LINE L1 -3760 2386 2152 342 319 86 78 chr5 186863479 186863711 -12766439 - L1ME1 LINE L1 -5539 580 347 548 382 0 0 chr5 186863878 186864022 -12766128 - MER91A DNA MER1_type -12 184 41 812 284 85 55 chr5 186864614 186865590 -12764560 + L1ME3A LINE L1 560 1609 -4701 1883 128 11 14 chr5 186865702 186866028 -12764122 - AluSx SINE Alu 0 325 1 873 314 78 42 chr5 186866477 186866660 -12763490 + L1ME3A LINE L1 2213 2388 -3741 1224 174 30 4 chr5 186866660 186866890 -12763260 + MER46A DNA MER2_type 1 236 0 873 314 78 42 chr5 186866890 186867701 -12762449 + L1ME3A LINE L1 2388 3243 -2886 631 285 100 54 chr5 186867914 186868268 -12761882 + L1ME3A LINE L1 5248 5681 -468 2107 124 0 51 chr5 186868268 186868623 -12761527 + MER1B DNA MER1_type 1 337 0 631 285 100 54 chr5 186868623 186868848 -12761302 + L1ME3A LINE L1 5681 5894 -255 21 71 0 0 chr5 186869951 186869993 -12760157 + AT_rich Low_complexity Low_complexity 1 42 0 1484 194 89 24 chr5 186870103 186870475 -12759675 - L1MA9 LINE L1 -39 6273 5878 1919 139 7 3 chr5 186870621 186870909 -12759241 - AluSx SINE Alu -23 289 1 181 250 0 71 chr5 186871407 186871463 -12758687 + L2 LINE L2 3214 3265 -7 282 239 337 18 chr5 186871750 186871913 -12758237 - MIR SINE MIR -5 257 43 337 266 51 12 chr5 186872388 186872550 -12757600 + MIR SINE MIR 8 262 0 2732 212 90 3 chr5 186872862 186873442 -12756708 + MER82 DNA MER2_type 23 652 -1 687 276 17 38 chr5 186873613 186873852 -12756298 - L2 LINE L2 0 3313 3080 670 276 113 76 chr5 186873867 186874328 -12755822 - MLT1G LTR MaLR -35 520 43 739 328 53 0 chr5 186874435 186874682 -12755468 - L2 LINE L2 -2098 1216 957 1854 240 27 11 chr5 186874685 186875210 -12754940 + L1M4 LINE L1 4266 4798 -1348 1260 191 51 12 chr5 186875213 186875469 -12754681 + AluJo SINE Alu 3 268 -44 2980 160 34 23 chr5 186875470 186876207 -12753943 + L1M4 LINE L1 5058 5791 -387 * 5743 145 36 22 chr5 186876202 186877717 -12752433 + L1MA4A LINE L1 4751 6301 -2 1733 181 67 20 chr5 186877696 186878099 -12752051 + L1MB8 LINE L1 5757 6178 0 * 1183 297 32 9 chr5 186878149 186878492 -12751658 - L2 LINE L2 -2599 715 365 467 308 53 0 chr5 186879620 186879753 -12750397 - MIR SINE MIR -99 163 24 337 293 75 0 chr5 186880141 186880247 -12749903 - MIR SINE MIR -91 171 58 25 0 0 0 chr5 186880527 186880552 -12749598 + AT_rich Low_complexity Low_complexity 1 25 0 335 213 96 21 chr5 186880750 186880844 -12749306 + MIR SINE MIR 134 234 -28 288 0 0 0 chr5 186880854 186880886 -12749264 + (CA)n Simple_repeat Simple_repeat 2 33 0 393 294 75 56 chr5 186880969 186881205 -12748945 - L1ME LINE L1 -349 5772 5523 1926 116 58 33 chr5 186881205 186881534 -12748616 + MER1B DNA MER1_type 1 337 0 393 294 75 56 chr5 186881534 186881709 -12748441 - L1ME LINE L1 -598 5523 5353 446 163 0 22 chr5 186881793 186881980 -12748170 + (TA)n Simple_repeat Simple_repeat 1 182 0 250 83 0 0 chr5 186881980 186882028 -12748122 + LTR66 LTR ERVL 392 439 -171 * 280 129 0 32 chr5 186881992 186882054 -12748096 - LTR66 LTR ERVL -171 439 380 27 73 0 0 chr5 186882090 186882145 -12748005 + AT_rich Low_complexity Low_complexity 1 55 0 24 0 0 0 chr5 186882408 186882432 -12747718 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 186882648 186882670 -12747480 + AT_rich Low_complexity Low_complexity 1 22 0 1345 113 5 5 chr5 186882913 186883099 -12747051 - AluSp SINE Alu -127 186 1 341 333 53 0 chr5 186883232 186883364 -12746786 + L2 LINE L2 3175 3313 0 2314 60 4 0 chr5 186883580 186883861 -12746289 + AluY SINE Alu 3 284 -27 354 45 0 0 chr5 186883861 186883905 -12746245 + (CA)n Simple_repeat Simple_repeat 2 45 0 2768 211 42 23 chr5 186884177 186884817 -12745333 - MER82 DNA MER2_type 0 653 2 937 55 78 0 chr5 186885743 186885871 -12744279 + MER85 DNA T2_type 1 138 -1 853 252 247 16 chr5 186886070 186886321 -12743829 + L2 LINE L2 2712 2904 -409 2387 165 21 16 chr5 186886321 186886752 -12743398 - Tigger2a DNA MER2_type 0 434 2 853 252 247 16 chr5 186886752 186886938 -12743212 + L2 LINE L2 2904 3246 -67 738 329 162 12 chr5 186887131 186887626 -12742524 + L2 LINE L2 2286 2854 -460 1287 108 6 0 chr5 186887658 186887834 -12742316 - AluSq SINE Alu -136 177 1 341 343 67 11 chr5 186887918 186888096 -12742054 + L2 LINE L2 3126 3313 0 1301 163 0 53 chr5 186888295 186888540 -12741610 + MER46A DNA MER2_type 5 236 0 812 259 72 17 chr5 186888610 186889014 -12741136 + MLT1J LTR MaLR 1 494 -17 286 190 0 0 chr5 186889835 186889893 -12740257 + L1ME LINE L1 5798 5855 -266 314 258 19 63 chr5 186890001 186890160 -12739990 + L1MC4a LINE L1 4883 5034 -1112 2191 133 9 0 chr5 186890285 186890601 -12739549 - MER1B DNA MER1_type -20 319 1 1240 286 97 12 chr5 186890669 186891165 -12738985 + L1MC4a LINE L1 5261 5798 -2010 7594 30 0 17 chr5 186891187 186892806 -12737344 - L1PA3 LINE L1 -3 6152 4549 9066 29 0 1 chr5 186892806 186893882 -12736268 + L1PA3 LINE L1 3451 4525 -1621 442 291 8 0 chr5 186893879 186894006 -12736144 + L1MC4a LINE L1 5786 5913 -1895 * 305 239 12 33 chr5 186894152 186894243 -12735907 - MER91B DNA MER1_type -14 182 87 24 32 0 0 chr5 186894903 186894934 -12735216 + AT_rich Low_complexity Low_complexity 1 31 0 286 293 69 17 chr5 186896832 186896948 -12733202 - MIR SINE MIR -21 241 120 265 209 45 0 chr5 186897105 186897172 -12732978 - MIR SINE MIR -10 252 183 984 40 80 0 chr5 186897441 186897566 -12732584 - MER85 DNA T2_type -4 135 1 441 274 75 40 chr5 186898161 186898413 -12731737 - MIR SINE MIR 0 262 2 201 310 206 45 chr5 186898417 186898772 -12731378 + L2 LINE L2 2291 2702 -612 250 329 0 0 chr5 186898783 186898859 -12731291 - L1MC4 LINE L1 -40 8002 7927 553 314 101 22 chr5 186899015 186899060 -12731090 - L1ME3A LINE L1 -229 5941 5901 2234 114 0 7 chr5 186899060 186899368 -12730782 - AluSq SINE Alu -7 306 1 553 314 101 22 chr5 186899368 186899768 -12730382 - L1ME3A LINE L1 -269 5901 5461 277 206 11 11 chr5 186900468 186900560 -12729590 + L1ME LINE L1 5290 5381 -781 1601 184 73 9 chr5 186900562 186900904 -12729246 - MLT1A1 LTR MaLR -1 364 1 4258 232 125 65 chr5 186900914 186902131 -12728019 - MLT1A1-int LTR MaLR -11 1724 422 2258 94 10 3 chr5 186902131 186902430 -12727720 + AluSx SINE Alu 1 301 -11 4258 232 125 65 chr5 186902430 186902519 -12727631 - MLT1A1-int LTR MaLR -1313 422 340 486 153 108 45 chr5 186902519 186902630 -12727520 - MLT1A1 LTR MaLR -217 148 31 5066 205 38 30 chr5 186902781 186902873 -12727277 + L1MB8 LINE L1 4060 4150 -2028 216 0 0 0 chr5 186902873 186902897 -12727253 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5066 205 38 30 chr5 186902897 186904877 -12725273 + L1MB8 LINE L1 4150 6152 -26 2714 225 62 39 chr5 186904896 186905740 -12724410 + L1ME3 LINE L1 5296 6158 -4 292 302 86 14 chr5 186905747 186905886 -12724264 + L1ME LINE L1 5688 5836 -334 507 268 166 39 chr5 186906230 186906344 -12723806 + HAL1 LINE L1 5 103 -2404 2134 119 51 28 chr5 186906344 186906698 -12723452 + THE1B LTR MaLR 1 362 -2 11566 86 19 1 chr5 186906700 186908251 -12721899 + THE1B-int LTR MaLR 1 1580 0 1889 92 71 82 chr5 186908251 186908619 -12721531 + THE1B LTR MaLR 1 364 0 507 268 166 39 chr5 186908619 186910613 -12719537 + HAL1 LINE L1 102 2507 0 301 342 19 31 chr5 186910681 186910842 -12719308 - L2 LINE L2 -188 3084 2926 180 366 56 0 chr5 186910886 186910957 -12719193 + L2 LINE L2 3239 3313 0 1801 168 7 3 chr5 186911229 186911532 -12718618 + AluJo SINE Alu 1 304 -8 25 83 0 0 chr5 186911698 186911758 -12718392 + AT_rich Low_complexity Low_complexity 1 60 0 822 162 0 0 chr5 186911879 186912058 -12718092 + (CA)n Simple_repeat Simple_repeat 2 180 0 4778 114 0 1 chr5 186912330 186913007 -12717143 + HERVH LTR ERV1 4474 5149 -2564 2531 133 16 14 chr5 186913024 186913460 -12716690 + HERVH LTR ERV1 7277 7713 0 1272 157 81 100 chr5 186913460 186913919 -12716231 + LTR7 LTR ERV1 1 450 0 2422 186 42 27 chr5 186914091 186914611 -12715539 + L1MB2 LINE L1 5476 6003 -168 530 250 0 22 chr5 186915422 186915558 -12714592 - MER94 DNA DNA 0 134 2 1026 153 28 37 chr5 186915769 186915984 -12714166 + L1MA3 LINE L1 6088 6300 -5 21 0 0 0 chr5 186916925 186916946 -12713204 + AT_rich Low_complexity Low_complexity 1 21 0 1242 243 159 52 chr5 186917195 186917754 -12712396 - L1MEc LINE L1 -5728 668 50 296 333 9 19 chr5 186917779 186917884 -12712266 - MER58 DNA MER1_type -236 105 2 593 216 78 18 chr5 186917885 186917988 -12712162 - L1MEc LINE L1 -4122 2274 2179 956 49 0 0 chr5 186917988 186918111 -12712039 - L1PA5 LINE L1 -2 6152 6030 593 216 78 18 chr5 186918111 186918225 -12711925 - L1MEc LINE L1 -4217 2179 2044 6550 113 2 3 chr5 186918225 186919979 -12710171 - L1PA8A LINE L1 -5 6126 4383 881 108 0 0 chr5 186920524 186920644 -12709506 + AluSq/x SINE Alu 1 120 -192 228 220 77 66 chr5 186921564 186921655 -12708495 - MIR SINE MIR -72 136 45 22 70 0 0 chr5 186921754 186921797 -12708353 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 186921833 186921855 -12708295 + AT_rich Low_complexity Low_complexity 1 22 0 192 248 9 18 chr5 186922415 186922524 -12707626 + A-rich Low_complexity Low_complexity 5 112 0 1616 183 84 0 chr5 186922811 186923122 -12707028 - MER1B DNA MER1_type 0 337 1 23 33 0 0 chr5 186923371 186923401 -12706749 + AT_rich Low_complexity Low_complexity 1 30 0 646 254 114 13 chr5 186923537 186923773 -12706377 + MIR SINE MIR 1 260 -2 354 321 146 73 chr5 186923884 186924064 -12706086 - L2 LINE L2 -5 3267 3102 1570 168 31 62 chr5 186924064 186924385 -12705765 + AluJo SINE Alu 1 311 -1 354 321 146 73 chr5 186924385 186924615 -12705535 - L2 LINE L2 -170 3102 2827 706 343 95 26 chr5 186924913 186925377 -12704773 - L2 LINE L2 -852 2462 1967 476 162 162 17 chr5 186925466 186925583 -12704567 - MER58B DNA MER1_type -1 340 207 804 193 88 12 chr5 186925683 186925854 -12704296 + AluJb SINE Alu 115 298 -14 994 192 32 87 chr5 186925950 186926229 -12703921 + L1ME1 LINE L1 5051 5344 -888 2050 84 4 15 chr5 186926229 186926502 -12703648 + AluSg SINE Alu 39 308 -2 994 192 32 87 chr5 186926502 186926611 -12703539 + L1ME1 LINE L1 5344 5423 -809 2222 116 3 3 chr5 186926611 186926914 -12703236 + AluSq SINE Alu 1 303 -10 994 192 32 87 chr5 186926914 186926978 -12703172 + L1ME1 LINE L1 5423 5489 -743 310 285 121 28 chr5 186927164 186927413 -12702737 + L1ME1 LINE L1 5547 5818 -1990 2250 80 3 17 chr5 186927421 186927722 -12702428 + AluSc SINE Alu 1 297 -12 940 253 49 29 chr5 186927891 186928077 -12702073 + L1ME1 LINE L1 5835 6031 -135 255 61 0 0 chr5 186928077 186928110 -12702040 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 940 253 49 29 chr5 186928110 186928231 -12701919 + L1ME1 LINE L1 6031 6148 -18 2956 202 25 9 chr5 186929872 186930561 -12699589 - L1 LINE L1 -2220 3926 3227 2897 126 37 45 chr5 186930563 186931230 -12698920 + L1P4 LINE L1 5117 5786 -380 2612 198 13 29 chr5 186931230 186931850 -12698300 + L1P LINE L1 3667 4276 -1870 9190 188 11 48 chr5 186931950 186933684 -12696466 - HERVH LTR ERV1 -3424 3105 1640 7396 36 3 1 chr5 186933684 186935296 -12694854 + L1PA4 LINE L1 4542 6155 0 9190 188 11 48 chr5 186935296 186935932 -12694218 - HERVH LTR ERV1 -4889 1640 982 1909 92 4 0 chr5 186936602 186936853 -12693297 - AluSp SINE Alu -8 305 54 501 298 80 16 chr5 186937192 186937380 -12692770 + MIR SINE MIR 19 218 -44 21 0 0 0 chr5 186938253 186938274 -12691876 + AT_rich Low_complexity Low_complexity 1 21 0 355 130 26 13 chr5 186938422 186938499 -12691651 + GA-rich Low_complexity Low_complexity 1 78 0 1847 177 3 0 chr5 186938611 186938905 -12691245 + AluJo SINE Alu 1 295 -17 2352 74 7 0 chr5 186939057 186939354 -12690796 - AluSq SINE Alu -14 299 1 25 0 0 0 chr5 186939680 186939705 -12690445 + AT_rich Low_complexity Low_complexity 1 25 0 1510 174 0 8 chr5 186940851 186941110 -12689040 + AluJb SINE Alu 44 300 -12 2127 112 3 38 chr5 186941157 186941471 -12688679 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr5 186941842 186941864 -12688286 + AT_rich Low_complexity Low_complexity 1 22 0 237 108 0 0 chr5 186942566 186942603 -12687547 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 23 0 0 0 chr5 186943202 186943225 -12686925 + AT_rich Low_complexity Low_complexity 1 23 0 185 348 58 0 chr5 186943372 186943441 -12686709 + MIR3 SINE MIR 130 202 -6 537 30 0 0 chr5 186943743 186943810 -12686340 + (TG)n Simple_repeat Simple_repeat 2 68 0 189 0 0 0 chr5 186944121 186944142 -12686008 + (TA)n Simple_repeat Simple_repeat 2 22 0 252 323 50 20 chr5 186944205 186944304 -12685846 + MIR3 SINE MIR 98 199 -9 3486 198 26 53 chr5 186944501 186944964 -12685186 - L1M4 LINE L1 -1167 4979 4505 1524 130 126 15 chr5 186944964 186945225 -12684925 - AluSg1 SINE Alu -19 290 1 3486 198 26 53 chr5 186945225 186945307 -12684843 - L1M4 LINE L1 -1641 4505 4422 1140 178 29 0 chr5 186945307 186945515 -12684635 - L1PA16 LINE L1 -4 6162 5949 3486 198 26 53 chr5 186945515 186945951 -12684199 - L1M4 LINE L1 -1724 4422 4023 837 247 67 7 chr5 186945951 186945984 -12684166 - L1M4 LINE L1 -3631 2515 2485 423 0 0 0 chr5 186945984 186946031 -12684119 + (TA)n Simple_repeat Simple_repeat 1 47 0 837 247 67 7 chr5 186946031 186946280 -12683870 - L1M4 LINE L1 -3661 2485 2216 3513 130 7 7 chr5 186946333 186946881 -12683269 - MER41B LTR ERV1 -86 549 2 15940 113 16 18 chr5 186946882 186949385 -12680765 - MER41B-int LTR ERV1 0 5946 3449 23 54 0 0 chr5 186949475 186949512 -12680638 + AT_rich Low_complexity Low_complexity 1 37 0 1003 281 83 23 chr5 186949520 186949714 -12680436 - L1MC4a LINE L1 -1916 5892 5711 1639 168 64 22 chr5 186949714 186950072 -12680078 - THE1C LTR MaLR -2 373 1 1003 281 83 23 chr5 186950072 186950262 -12679888 - L1MC4a LINE L1 -2097 5711 5485 44632 34 1 2 chr5 186950268 186956412 -12673738 - L1PA3 LINE L1 -3 6152 9 565 220 6 68 chr5 186956421 186956595 -12673555 - L1MC4a LINE L1 -847 5455 5338 1611 173 0 73 chr5 186956595 186956925 -12673225 - AluJb SINE Alu -6 306 1 565 220 6 68 chr5 186956925 186956969 -12673181 - L1MC4a LINE L1 -964 5338 5293 331 301 50 23 chr5 186957026 186957338 -12672812 - L1M4 LINE L1 -909 5237 4914 2039 150 0 42 chr5 186957338 186957691 -12672459 - MER1B DNA MER1_type 0 339 2 315 331 16 5 chr5 186957697 186957881 -12672269 - L1M4 LINE L1 -1226 4920 4735 2095 139 0 3 chr5 186957964 186958266 -12671884 - AluSx SINE Alu -11 301 1 3835 133 2 7 chr5 186958308 186958910 -12671240 - L1MA8 LINE L1 -173 6118 5520 512 252 0 0 chr5 186958941 186959052 -12671098 + L1MD3 LINE L1 1682 1792 -4592 4263 233 135 66 chr5 186959070 186960674 -12669476 - L1M4c LINE L1 -3965 2419 614 1823 142 18 18 chr5 186960674 186960991 -12669159 - AluSx SINE Alu 0 317 1 4263 233 135 66 chr5 186960991 186961615 -12668535 - L1M4c LINE L1 -5770 614 35 1471 109 153 0 chr5 186961672 186961920 -12668230 + MER47A DNA MER2_type 81 366 0 199 298 0 60 chr5 186962283 186962367 -12667783 - MIR3 SINE MIR -15 193 115 541 313 88 10 chr5 186962966 186963362 -12666788 - L1ME LINE L1 -305 5816 5390 * 2412 218 22 61 chr5 186963361 186964136 -12666014 + L1MD3 LINE L1 4773 5517 -865 1297 214 8 15 chr5 186964274 186964536 -12665614 + MLT1D LTR MaLR 246 505 0 2264 219 122 11 chr5 186964538 186965168 -12664982 + L1MD3 LINE L1 5532 6231 -2000 302 276 145 40 chr5 186965504 186965570 -12664580 - MIR SINE MIR -88 174 116 891 70 70 0 chr5 186965570 186965699 -12664451 + MER85 DNA T2_type 1 138 -1 302 276 145 40 chr5 186965699 186965784 -12664366 - MIR SINE MIR -146 116 7 1565 164 42 31 chr5 186965933 186966232 -12663918 + L1MB8 LINE L1 5815 6120 -58 2065 122 10 7 chr5 186966232 186966535 -12663615 + AluSx SINE Alu 1 304 -8 1565 164 42 31 chr5 186966535 186966595 -12663555 + L1MB8 LINE L1 6120 6178 0 262 148 66 16 chr5 186966620 186966681 -12663469 + L1MC5 LINE L1 5673 5736 -2072 1085 205 133 113 chr5 186966998 186967620 -12662530 + L1MC5 LINE L1 6636 7277 -684 2345 71 0 3 chr5 186967620 186967915 -12662235 + AluY SINE Alu 2 295 -16 1085 205 133 113 chr5 186967915 186968028 -12662122 + L1MC5 LINE L1 7277 7386 -575 10834 129 32 20 chr5 186968294 186968683 -12661467 + Tigger1 DNA MER2_type 582 965 -1453 1858 123 24 90 chr5 186968683 186969017 -12661133 - AluSx SINE Alu 0 312 1 10834 129 32 20 chr5 186969017 186970441 -12659709 + Tigger1 DNA MER2_type 965 2416 -2 424 291 36 21 chr5 186971642 186971827 -12658323 + MIR3 SINE MIR 19 206 -54 1780 199 25 3 chr5 186972246 186972603 -12657547 + MLT1A1 LTR MaLR 1 365 0 525 252 23 38 chr5 186972607 186972737 -12657413 - MER8 DNA MER2_type 0 239 112 1913 136 84 10 chr5 186972737 186973047 -12657103 + THE1B LTR MaLR 1 333 -31 4557 23 0 0 chr5 186973047 186973578 -12656572 - L1PA2 LINE L1 0 6155 5625 910 57 81 0 chr5 186973838 186973961 -12656189 + MER85 DNA T2_type 6 138 -1 867 252 247 16 chr5 186974160 186974411 -12655739 + L2 LINE L2 2712 2904 -409 2369 165 21 16 chr5 186974411 186974842 -12655308 - Tigger2a DNA MER2_type 0 434 2 867 252 247 16 chr5 186974842 186975028 -12655122 + L2 LINE L2 2904 3246 -67 756 321 174 24 chr5 186975221 186975716 -12654434 + L2 LINE L2 2286 2854 -460 1319 108 6 0 chr5 186975748 186975924 -12654226 - AluSq SINE Alu -136 177 1 333 343 67 11 chr5 186976008 186976186 -12653964 + L2 LINE L2 3126 3313 0 1281 163 0 53 chr5 186976385 186976630 -12653520 + MER46A DNA MER2_type 5 236 0 739 259 72 17 chr5 186976700 186977104 -12653046 + MLT1J LTR MaLR 1 494 -17 271 171 0 66 chr5 186977925 186978001 -12652149 + L1ME LINE L1 5798 5868 -253 269 269 20 47 chr5 186978102 186978251 -12651899 + L1MC/D LINE L1 4890 5034 -1112 2105 133 9 0 chr5 186978376 186978692 -12651458 - MER1B DNA MER1_type -20 319 1 1035 266 105 20 chr5 186978760 186979256 -12650894 + L1MC/D LINE L1 5261 5798 -2010 40552 35 22 1 chr5 186979278 186985289 -12644861 - L1PA3 LINE L1 -3 6152 13 237 175 0 0 chr5 186985292 186985332 -12644818 + THE1A LTR MaLR 316 355 0 11685 96 8 2 chr5 186985332 186986903 -12643247 + THE1B-int LTR MaLR 1 1580 0 2196 121 79 9 chr5 186986903 186987243 -12642907 + THE1B LTR MaLR 1 364 0 707 171 0 8 chr5 186987243 186987360 -12642790 - MER8 DNA MER2_type -123 116 1 191 259 37 19 chr5 186987887 186987941 -12642209 + MIR3 SINE MIR 129 183 -25 832 166 0 35 chr5 186988398 186988543 -12641607 + AluSp/q SINE Alu 156 295 -18 207 407 62 0 chr5 186988596 186988709 -12641441 + L2 LINE L2 3151 3270 -2 304 259 0 12 chr5 186989194 186989275 -12640875 + MIR SINE MIR 183 262 0 199 274 111 59 chr5 186989605 186989758 -12640392 + MIR SINE MIR 89 249 -13 439 162 0 50 chr5 186990109 186990208 -12639942 - Tigger2 DNA MER2_type -345 2373 2280 427 159 0 0 chr5 186990206 186990275 -12639875 - Tigger2 DNA MER2_type -2649 69 1 * 273 310 46 0 chr5 186991599 186991686 -12638464 - MIR SINE MIR -109 153 63 414 0 0 0 chr5 186991706 186991752 -12638398 + (TTA)n Simple_repeat Simple_repeat 3 48 0 29438 104 10 21 chr5 186991752 186998121 -12632029 - L1PA7 LINE L1 -18 6451 44 2151 118 3 6 chr5 186998121 186998434 -12631716 - AluSp SINE Alu -1 312 1 567 273 113 43 chr5 186998702 186998933 -12631217 + MIR SINE MIR 11 257 -5 2830 7 0 0 chr5 186999198 186999504 -12630646 + AluYa5 SINE Alu 1 306 -5 1661 162 3 70 chr5 186999517 186999832 -12630318 + AluJo SINE Alu 6 299 -13 225 223 0 126 chr5 187000387 187000490 -12629660 - L2 LINE L2 -243 3029 2940 200 222 0 37 chr5 187000787 187000841 -12629309 + MER5B DNA MER1_type 4 55 -123 411 299 13 52 chr5 187001017 187001127 -12629023 + MER5B DNA MER1_type 26 130 -48 180 0 0 0 chr5 187001127 187001147 -12629003 + (TTG)n Simple_repeat Simple_repeat 2 21 0 411 299 13 52 chr5 187001147 187001190 -12628960 + MER5B DNA MER1_type 130 173 -5 287 253 108 12 chr5 187001219 187001302 -12628848 - MIR SINE MIR -109 153 63 1674 193 3 0 chr5 187002507 187002807 -12627343 - AluJo SINE Alu -9 303 3 1840 155 16 0 chr5 187003575 187003884 -12626266 + MER2 DNA MER2_type 1 314 -31 274 228 123 29 chr5 187003896 187004067 -12626083 + L1ME4a LINE L1 5719 5905 -216 280 239 125 0 chr5 187004093 187004181 -12625969 + L1ME4a LINE L1 5969 6067 -54 594 236 45 56 chr5 187004224 187004402 -12625748 + MIR SINE MIR 23 198 -64 1839 215 58 36 chr5 187004605 187004961 -12625189 - MER34 LTR ERV1 0 542 170 1790 24 0 0 chr5 187004961 187005171 -12624979 - L1PA2 LINE L1 -3 6152 5943 1839 215 58 36 chr5 187005171 187005335 -12624815 - MER34 LTR ERV1 -372 170 11 200 200 0 50 chr5 187005818 187005878 -12624272 + T-rich Low_complexity Low_complexity 2 58 0 306 244 0 52 chr5 187005904 187006039 -12624111 + CT-rich Low_complexity Low_complexity 3 130 0 260 297 41 24 chr5 187006348 187006496 -12623654 + MIR SINE MIR 59 256 -6 748 298 55 9 chr5 187006955 187007173 -12622977 - MIR SINE MIR -26 236 9 1682 191 139 21 chr5 187007173 187007640 -12622510 + Charlie1b DNA MER1_type 1 522 -1 240 242 113 16 chr5 187008177 187008239 -12621911 - L2 LINE L2 -5 3267 3200 1625 193 45 0 chr5 187008276 187008566 -12621584 + AluJb SINE Alu 1 303 -9 7155 144 88 31 chr5 187010104 187011052 -12619098 - L1MA5A LINE L1 -4 6935 6042 2144 115 20 7 chr5 187011052 187011356 -12618794 - AluSg SINE Alu -2 308 1 7155 144 88 31 chr5 187011356 187011393 -12618757 - L1MA5A LINE L1 -897 6042 6009 344 22 22 0 chr5 187011393 187011438 -12618712 + (TTG)n Simple_repeat Simple_repeat 3 48 0 7155 144 88 31 chr5 187011438 187013078 -12617072 - L1MA5A LINE L1 -930 6009 4145 806 181 13 0 chr5 187013071 187013226 -12616924 - L1 LINE L1 -2010 5555 5399 * 1711 156 208 57 chr5 187013222 187013320 -12616830 - L1 LINE L1 -5563 2002 1920 2348 87 10 0 chr5 187013320 187013620 -12616530 + AluSp SINE Alu 1 303 -10 1711 156 208 57 chr5 187013620 187014015 -12616135 - L1 LINE L1 -5645 1920 1386 4893 229 32 30 chr5 187014017 187015902 -12614248 - L1MA5A LINE L1 -4810 1979 8 6403 253 82 35 chr5 187015946 187018209 -12611941 + L1MA4A LINE L1 7 2376 -4473 1933 208 34 27 chr5 187018219 187018575 -12611575 + L1MA4A LINE L1 2625 2977 -3871 2227 117 0 7 chr5 187018575 187018882 -12611268 + AluSx SINE Alu 1 305 -7 1933 208 34 27 chr5 187018882 187019336 -12610814 + L1MA4A LINE L1 2977 3442 -3406 5952 189 12 16 chr5 187019661 187019724 -12610426 + L1MA4A LINE L1 3398 3460 -3388 2318 89 10 0 chr5 187019724 187020017 -12610133 - AluSg SINE Alu -14 296 1 5952 189 12 16 chr5 187020017 187021352 -12608798 + L1MA4A LINE L1 3460 4791 -2057 4984 154 32 24 chr5 187021350 187021810 -12608340 + L1MA4A LINE L1 5898 6353 -652 * 2403 65 7 0 chr5 187021810 187022101 -12608049 + AluY SINE Alu 1 293 -18 4984 154 32 24 chr5 187022101 187022743 -12607407 + L1MA4A LINE L1 6353 7005 0 1844 226 18 15 chr5 187223843 187224237 -12405913 - MLT1F1 LTR MaLR 0 567 173 24 32 0 0 chr5 187224257 187224288 -12405862 + AT_rich Low_complexity Low_complexity 1 31 0 1650 148 39 0 chr5 187224497 187224754 -12405396 - Tigger3(Golem) DNA MER2_type -1 3028 2762 3223 91 11 9 chr5 187224761 187225212 -12404938 - L1PA10 LINE L1 0 6168 5717 233 67 0 0 chr5 187225239 187225269 -12404881 - Tigger3(Golem) DNA MER2_type -715 2314 2285 483 226 11 0 chr5 187225386 187225479 -12404671 - Tigger3(Golem) DNA MER2_type -2934 95 2 28 0 0 0 chr5 187226238 187226266 -12403884 + AT_rich Low_complexity Low_complexity 1 28 0 281 268 87 47 chr5 187226674 187226801 -12403349 + MIR3 SINE MIR 75 206 -2 23 33 0 0 chr5 187227210 187227240 -12402910 + AT_rich Low_complexity Low_complexity 1 30 0 940 253 49 29 chr5 187228727 187228848 -12401302 - L1ME1 LINE L1 -18 6542 6425 255 61 0 0 chr5 187228848 187228881 -12401269 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 940 253 49 29 chr5 187228881 187229067 -12401083 - L1ME1 LINE L1 -135 6425 6229 2250 80 3 17 chr5 187229236 187229537 -12400613 - AluSc SINE Alu -12 297 1 320 292 116 28 chr5 187229545 187229795 -12400355 - L1ME1 LINE L1 -1990 6212 5941 999 186 35 94 chr5 187229981 187230045 -12400105 - L1ME1 LINE L1 -743 5797 5731 2213 111 3 3 chr5 187230045 187230343 -12399807 - AluSq SINE Alu -9 304 7 999 186 35 94 chr5 187230343 187230455 -12399695 - L1ME1 LINE L1 -809 5731 5614 2058 84 4 15 chr5 187230455 187230729 -12399421 - AluSg SINE Alu -1 309 39 999 186 35 94 chr5 187230729 187231008 -12399142 - L1ME1 LINE L1 -926 5614 5445 463 233 45 23 chr5 187231042 187231104 -12399046 - L1ME1 LINE L1 -3996 2725 2666 1354 211 53 7 chr5 187231104 187231389 -12398761 - AluJo SINE Alu -14 298 1 463 233 45 23 chr5 187231389 187231502 -12398648 - L1ME1 LINE L1 -4055 2666 2546 5881 112 25 2 chr5 187231505 187233174 -12396976 - L1PA15 LINE L1 0 6165 4470 261 210 85 100 chr5 187233178 187233378 -12396772 - L1ME1 LINE L1 -4073 2467 2271 1389 157 133 0 chr5 187233480 187233728 -12396422 + AluJo SINE Alu 12 292 -20 1094 252 76 56 chr5 187233732 187234271 -12395879 - L1ME1 LINE L1 -4423 2117 1568 4926 205 46 41 chr5 187234274 187235888 -12394262 - L1MB5 LINE L1 -8 6166 4561 2076 130 3 0 chr5 187235888 187236181 -12393969 - AluSq SINE Alu -19 294 1 4926 205 46 41 chr5 187236181 187236263 -12393887 - L1MB5 LINE L1 -1613 4561 4481 1188 168 29 0 chr5 187236263 187236471 -12393679 - L1PA16 LINE L1 -4 6162 5949 4926 205 46 41 chr5 187236471 187236907 -12393243 - L1MB5 LINE L1 -1693 4481 4023 816 257 60 3 chr5 187236907 187236940 -12393210 - L1MB5 LINE L1 -3631 2515 2485 360 0 0 0 chr5 187236940 187236980 -12393170 + (TA)n Simple_repeat Simple_repeat 2 41 0 816 257 60 3 chr5 187236980 187237230 -12392920 - L1MB5 LINE L1 -3661 2485 2216 3540 128 7 7 chr5 187237284 187237832 -12392318 - MER41B LTR ERV1 -86 549 2 15971 112 16 16 chr5 187237833 187240323 -12389827 - MER41B-int LTR ERV1 0 5946 3459 878 264 77 75 chr5 187240323 187240663 -12389487 - L1MC4a LINE L1 -1792 6016 5673 1772 164 41 22 chr5 187240663 187241029 -12389121 - THE1C LTR MaLR -2 373 1 878 264 77 75 chr5 187241029 187241210 -12388940 - L1MC4a LINE L1 -2135 5673 5494 44430 35 1 2 chr5 187241224 187247370 -12382780 - L1PA3 LINE L1 -3 6152 9 565 220 6 68 chr5 187247379 187247553 -12382597 - L1MC4a LINE L1 -847 5455 5338 1623 173 0 73 chr5 187247553 187247883 -12382267 - AluJb SINE Alu -6 306 1 565 220 6 68 chr5 187247883 187247927 -12382223 - L1MC4a LINE L1 -964 5338 5293 331 301 50 23 chr5 187247984 187248296 -12381854 - L1M4 LINE L1 -909 5237 4914 2050 147 0 42 chr5 187248296 187248649 -12381501 - MER1B DNA MER1_type 0 339 2 315 331 16 5 chr5 187248655 187248839 -12381311 - L1M4 LINE L1 -1226 4920 4735 2118 136 0 3 chr5 187248922 187249224 -12380926 - AluSx SINE Alu -11 301 1 3819 135 2 7 chr5 187249266 187249868 -12380282 - L1MA8 LINE L1 -173 6118 5520 512 252 0 0 chr5 187249899 187250010 -12380140 + L1MC3 LINE L1 1682 1792 -4592 4273 231 136 66 chr5 187250028 187251632 -12378518 - L1M4c LINE L1 -3965 2419 614 1823 142 18 18 chr5 187251632 187251952 -12378198 - AluSx SINE Alu 0 320 1 4273 231 136 66 chr5 187251952 187252576 -12377574 - L1M4c LINE L1 -5770 614 35 1471 109 153 0 chr5 187252633 187252881 -12377269 + MER47A DNA MER2_type 81 366 0 199 298 0 60 chr5 187253244 187253328 -12376822 - MIR3 SINE MIR -15 193 115 572 308 94 8 chr5 187253927 187254320 -12375830 - L1ME LINE L1 -305 5816 5390 * 2387 219 22 63 chr5 187254319 187255096 -12375054 + L1MC3 LINE L1 4773 5517 -865 1264 209 15 27 chr5 187255234 187255497 -12374653 + MLT1D LTR MaLR 246 505 0 3809 280 104 55 chr5 187255499 187256984 -12373166 + L1MC3 LINE L1 5532 7090 -931 329 234 138 7 chr5 187256999 187257144 -12373006 + L1MD3 LINE L1 6946 7109 -886 307 232 98 0 chr5 187257151 187257233 -12372917 + MLT1F1 LTR MaLR 36 125 -442 2273 188 31 24 chr5 187257234 187257787 -12372363 + L1MD3 LINE L1 7229 7992 -1 302 276 145 40 chr5 187258089 187258155 -12371995 - MIR SINE MIR -88 174 116 891 70 70 0 chr5 187258155 187258284 -12371866 + MER85 DNA T2_type 1 138 -1 302 276 145 40 chr5 187258284 187258369 -12371781 - MIR SINE MIR -146 116 7 1565 164 42 31 chr5 187258518 187258817 -12371333 + L1MB8 LINE L1 5815 6120 -58 2080 119 10 7 chr5 187258817 187259120 -12371030 + AluSx SINE Alu 1 304 -8 1565 164 42 31 chr5 187259120 187259180 -12370970 + L1MB8 LINE L1 6120 6178 0 262 148 66 16 chr5 187259205 187259266 -12370884 + L1MC5 LINE L1 5673 5736 -2072 1068 204 135 113 chr5 187259582 187260203 -12369947 + L1MC5 LINE L1 6636 7277 -684 2330 75 0 3 chr5 187260203 187260498 -12369652 + AluY SINE Alu 2 295 -16 1068 204 135 113 chr5 187260498 187260611 -12369539 + L1MC5 LINE L1 7277 7386 -575 10843 129 32 20 chr5 187260877 187261265 -12368885 + Tigger1 DNA MER2_type 582 964 -1454 1842 126 24 90 chr5 187261265 187261599 -12368551 - AluSx SINE Alu 0 312 1 10843 129 32 20 chr5 187261599 187263023 -12367127 + Tigger1 DNA MER2_type 964 2416 -2 428 285 78 36 chr5 187263025 187263218 -12366932 + MLT1K LTR MaLR 273 473 -115 311 44 22 0 chr5 187263371 187263416 -12366734 + (CA)n Simple_repeat Simple_repeat 2 47 0 257 336 164 15 chr5 187264153 187264287 -12365863 - MIR SINE MIR -96 166 13 431 292 15 22 chr5 187265695 187265832 -12364318 + MIR3 SINE MIR 19 154 -54 1794 196 25 3 chr5 187266300 187266657 -12363493 + MLT1A1 LTR MaLR 1 365 0 525 252 23 38 chr5 187266661 187266791 -12363359 - MER8 DNA MER2_type 0 239 112 1938 134 83 10 chr5 187266791 187267104 -12363046 + THE1B LTR MaLR 1 336 -28 42466 34 22 1 chr5 187267104 187273116 -12357034 - L1PA2 LINE L1 -1 6154 13 251 175 0 0 chr5 187273119 187273159 -12356991 + THE1B LTR MaLR 316 355 0 11584 96 9 2 chr5 187273159 187274728 -12355422 + THE1B-int LTR MaLR 1 1580 0 2196 121 79 9 chr5 187274728 187275068 -12355082 + THE1B LTR MaLR 1 364 0 752 171 0 8 chr5 187275068 187275185 -12354965 - MER8 DNA MER2_type -123 116 1 191 259 37 19 chr5 187275712 187275766 -12354384 + MIR3 SINE MIR 129 183 -25 835 171 0 27 chr5 187276223 187276369 -12353781 + AluSp/q SINE Alu 156 297 -16 207 407 62 0 chr5 187276422 187276535 -12353615 + L2 LINE L2 3151 3270 -2 304 259 0 12 chr5 187277020 187277101 -12353049 + MIR SINE MIR 183 262 0 199 274 111 59 chr5 187277431 187277584 -12352566 + MIR SINE MIR 89 249 -13 951 186 16 18 chr5 187278000 187278317 -12351833 + MSTD LTR MaLR 2 394 -2 233 308 28 28 chr5 187278747 187278854 -12351296 + MIR SINE MIR 85 191 -71 1850 153 80 49 chr5 187278859 187279284 -12350866 - Tigger2 DNA MER2_type -1 2717 2280 427 159 0 0 chr5 187279282 187279351 -12350799 - Tigger2 DNA MER2_type -2649 69 1 * 273 310 46 0 chr5 187280643 187280730 -12349420 - MIR SINE MIR -109 153 63 414 0 0 0 chr5 187280750 187280796 -12349354 + (TTA)n Simple_repeat Simple_repeat 3 48 0 12075 85 23 2 chr5 187280796 187283274 -12346876 - L1PA7 LINE L1 -18 6136 3622 23067 113 12 26 chr5 187283374 187288143 -12342007 - L1P3 LINE L1 -1611 4850 44 2151 118 3 6 chr5 187288143 187288456 -12341694 - AluSp SINE Alu -1 312 1 567 273 113 43 chr5 187288724 187288955 -12341195 + MIR SINE MIR 11 257 -5 2848 7 0 0 chr5 187289220 187289527 -12340623 + AluYa5 SINE Alu 1 307 -4 1669 161 3 70 chr5 187289540 187289856 -12340294 + AluJo SINE Alu 6 300 -12 225 223 0 126 chr5 187290411 187290514 -12339636 - L2 LINE L2 -243 3029 2940 197 222 0 37 chr5 187290811 187290865 -12339285 + MER5B DNA MER1_type 4 55 -123 411 299 13 52 chr5 187291041 187291151 -12338999 + MER5B DNA MER1_type 26 130 -48 207 0 0 0 chr5 187291151 187291174 -12338976 + (TTG)n Simple_repeat Simple_repeat 2 24 0 411 299 13 52 chr5 187291174 187291217 -12338933 + MER5B DNA MER1_type 130 173 -5 287 253 108 12 chr5 187291246 187291329 -12338821 - MIR SINE MIR -109 153 63 1674 193 3 0 chr5 187292534 187292834 -12337316 - AluJo SINE Alu -9 303 3 1840 155 16 0 chr5 187293602 187293911 -12336239 + MER2 DNA MER2_type 1 314 -31 274 228 123 29 chr5 187293923 187294094 -12336056 + L1ME4a LINE L1 5719 5905 -216 280 239 125 0 chr5 187294120 187294208 -12335942 + L1ME4a LINE L1 5969 6067 -54 594 236 45 56 chr5 187294251 187294429 -12335721 + MIR SINE MIR 23 198 -64 1839 215 58 36 chr5 187294632 187294988 -12335162 - MER34 LTR ERV1 0 542 170 1783 19 5 0 chr5 187294988 187295198 -12334952 - L1PA2 LINE L1 -2 6153 5943 1839 215 58 36 chr5 187295198 187295362 -12334788 - MER34 LTR ERV1 -372 170 11 263 431 31 0 chr5 187295951 187296081 -12334069 + L2 LINE L2 3119 3252 -20 260 297 41 24 chr5 187297027 187297175 -12332975 + MIR SINE MIR 59 256 -6 748 298 55 9 chr5 187297634 187297852 -12332298 - MIR SINE MIR -26 236 9 1682 191 139 21 chr5 187297852 187298319 -12331831 + Charlie1b DNA MER1_type 1 522 -1 240 242 113 16 chr5 187298856 187298918 -12331232 - L2 LINE L2 -5 3267 3200 1597 197 45 0 chr5 187298955 187299245 -12330905 + AluJb SINE Alu 1 303 -9 7155 145 88 31 chr5 187300664 187301612 -12328538 - L1MA5A LINE L1 -4 6935 6042 2144 115 20 7 chr5 187301612 187301916 -12328234 - AluSg SINE Alu -2 308 1 7155 145 88 31 chr5 187301916 187301953 -12328197 - L1MA5A LINE L1 -897 6042 6009 371 21 21 0 chr5 187301953 187302001 -12328149 + (TTG)n Simple_repeat Simple_repeat 3 51 0 7155 145 88 31 chr5 187302001 187303641 -12326509 - L1MA5A LINE L1 -930 6009 4145 842 179 6 0 chr5 187303634 187303790 -12326360 - L1 LINE L1 -2010 5555 5399 * 1700 158 208 57 chr5 187303786 187303884 -12326266 - L1 LINE L1 -5563 2002 1920 2357 86 10 0 chr5 187303884 187304185 -12325965 + AluSp SINE Alu 1 304 -9 1700 158 208 57 chr5 187304185 187304580 -12325570 - L1 LINE L1 -5645 1920 1386 4886 230 32 30 chr5 187304582 187306467 -12323683 - L1MA5A LINE L1 -4810 1979 8 7775 222 101 31 chr5 187306511 187309164 -12320986 + L1MA4A LINE L1 7 2472 -4376 2244 117 0 7 chr5 187309164 187309473 -12320677 + AluSx SINE Alu 1 307 -5 7775 222 101 31 chr5 187309473 187309946 -12320204 + L1MA4A LINE L1 2472 2910 -3938 2334 89 10 0 chr5 187309946 187310239 -12319911 - AluSg SINE Alu -14 296 1 7775 222 101 31 chr5 187310239 187311574 -12318576 + L1MA4A LINE L1 2910 4791 -2057 4879 154 35 25 chr5 187311572 187312029 -12318121 + L1MA4A LINE L1 5898 6349 -656 * 2403 65 7 0 chr5 187312029 187312320 -12317830 + AluY SINE Alu 1 293 -18 4879 154 35 25 chr5 187312320 187312962 -12317188 + L1MA4A LINE L1 6349 7005 0 1949 91 4 0 chr5 187314583 187314837 -12315313 - AluSp SINE Alu -5 308 54 469 299 87 16 chr5 187315176 187315360 -12314790 + MIR SINE MIR 19 215 -47 21 0 0 0 chr5 187316234 187316255 -12313895 + AT_rich Low_complexity Low_complexity 1 21 0 355 130 26 13 chr5 187316403 187316480 -12313670 + GA-rich Low_complexity Low_complexity 1 78 0 1896 174 3 0 chr5 187316592 187316886 -12313264 + AluJo SINE Alu 1 295 -17 2350 74 7 0 chr5 187317038 187317335 -12312815 - AluSq SINE Alu -14 299 1 25 0 0 0 chr5 187317661 187317686 -12312464 + AT_rich Low_complexity Low_complexity 1 25 0 1521 174 0 8 chr5 187318832 187319091 -12311059 + AluJb SINE Alu 44 300 -12 2170 108 3 38 chr5 187319138 187319452 -12310698 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr5 187319823 187319845 -12310305 + AT_rich Low_complexity Low_complexity 1 22 0 216 135 0 0 chr5 187320547 187320584 -12309566 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 23 0 0 0 chr5 187321183 187321206 -12308944 + AT_rich Low_complexity Low_complexity 1 23 0 184 348 58 0 chr5 187321353 187321422 -12308728 + MIR3 SINE MIR 130 202 -6 627 26 0 0 chr5 187321724 187321801 -12308349 + (TG)n Simple_repeat Simple_repeat 2 78 0 189 0 0 0 chr5 187322112 187322133 -12308017 + (TA)n Simple_repeat Simple_repeat 1 21 0 248 323 50 20 chr5 187322196 187322295 -12307855 + MIR3 SINE MIR 98 199 -9 413 298 101 25 chr5 187322309 187322675 -12307475 + L1MCc LINE L1 11 404 -6019 636 156 21 28 chr5 187322833 187322951 -12307199 + L1MD3 LINE L1 7856 7974 -21 1597 206 0 29 chr5 187322951 187323267 -12306883 + AluJo SINE Alu 1 307 -5 636 156 21 28 chr5 187323267 187323289 -12306861 + L1MD3 LINE L1 7974 7995 0 21 0 0 0 chr5 187323434 187323455 -12306695 + AT_rich Low_complexity Low_complexity 1 21 0 208 213 21 21 chr5 187323608 187323655 -12306495 + L2 LINE L2 3262 3308 -5 * 665 317 76 77 chr5 187323652 187324508 -12305642 + L2 LINE L2 2376 3236 -36 427 232 99 14 chr5 187324789 187324931 -12305219 + L1ME1 LINE L1 5979 6132 -34 2106 88 0 79 chr5 187325476 187325804 -12304346 + AluY SINE Alu 1 302 -9 256 327 195 13 chr5 187326882 187327041 -12303109 - MIR SINE MIR -24 238 51 238 274 32 0 chr5 187327684 187327746 -12302404 - MIR SINE MIR -58 150 87 432 378 97 19 chr5 187327827 187328086 -12302064 - L2 LINE L2 -91 3181 2903 1811 164 10 22 chr5 187328244 187328555 -12301595 + AluJb SINE Alu 3 309 -3 533 305 55 10 chr5 187331548 187331748 -12298402 - MIR SINE MIR -14 248 40 471 323 118 10 chr5 187332059 187332254 -12297896 + MIR SINE MIR 4 219 -43 838 211 82 0 chr5 187332264 187332435 -12297715 + MER20 DNA MER1_type 33 217 -2 378 0 0 0 chr5 187332560 187332602 -12297548 + (TG)n Simple_repeat Simple_repeat 1 42 0 2331 103 0 6 chr5 187332622 187332934 -12297216 - AluSg SINE Alu 0 310 1 5762 29 1 5 chr5 187332982 187333629 -12296521 + SVA Other Other 742 1386 0 540 227 24 193 chr5 187333880 187334175 -12295975 + MIR SINE MIR 15 259 -3 22 0 0 0 chr5 187335485 187335507 -12294643 + AT_rich Low_complexity Low_complexity 1 22 0 438 340 96 0 chr5 187335743 187335940 -12294210 - MIR SINE MIR 0 262 47 2160 82 13 40 chr5 187337347 187337651 -12292499 + AluSx SINE Alu 1 296 -16 322 293 177 40 chr5 187337989 187338187 -12291963 - MIR SINE MIR -12 250 26 1889 103 80 0 chr5 187338985 187339274 -12290876 + AluSp SINE Alu 1 310 0 2119 119 0 10 chr5 187339505 187339799 -12290351 - AluSx SINE Alu -21 291 1 2015 90 0 30 chr5 187340079 187340379 -12289771 + AluSx SINE Alu 10 300 -12 348 188 0 0 chr5 187340379 187340448 -12289702 + (TA)n Simple_repeat Simple_repeat 2 70 0 21 36 0 0 chr5 187340553 187340581 -12289569 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 187341686 187341721 -12288429 + AT_rich Low_complexity Low_complexity 1 35 0 2342 84 16 7 chr5 187344923 187345231 -12284919 + AluY SINE Alu 1 311 0 696 280 110 8 chr5 187345689 187345925 -12284225 - MIR SINE MIR 0 262 3 2045 96 26 26 chr5 187346073 187346375 -12283775 - AluSx SINE Alu -10 302 1 429 278 143 57 chr5 187350374 187350459 -12279691 - MIR SINE MIR -6 256 180 2152 109 17 3 chr5 187350459 187350761 -12279389 - AluSx SINE Alu -6 306 1 429 278 143 57 chr5 187350761 187350905 -12279245 - MIR SINE MIR -82 180 7 201 200 0 22 chr5 187351382 187351427 -12278723 - L2 LINE L2 -78 3235 3192 272 308 133 72 chr5 187353341 187353718 -12276432 - L2 LINE L2 -40 3232 2833 267 133 0 0 chr5 187354106 187354151 -12275999 + (TC)n Simple_repeat Simple_repeat 2 46 0 21 57 0 0 chr5 187355242 187355277 -12274873 + AT_rich Low_complexity Low_complexity 1 35 0 207 195 0 0 chr5 187355491 187355532 -12274618 + T-rich Low_complexity Low_complexity 3 43 0 27 0 0 0 chr5 187355565 187355592 -12274558 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 187356662 187356683 -12273467 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 187357653 187357675 -12272475 + AT_rich Low_complexity Low_complexity 1 22 0 34 24 0 0 chr5 187358670 187358711 -12271439 + AT_rich Low_complexity Low_complexity 1 41 0 646 202 79 17 chr5 187358962 187359140 -12271010 - MER5A DNA MER1_type 0 189 1 378 0 0 0 chr5 187360035 187360077 -12270073 + (TG)n Simple_repeat Simple_repeat 2 43 0 5300 49 22 1 chr5 187360089 187360761 -12269389 - L1PA7 LINE L1 -3 6151 5466 1464 41 23 0 chr5 187360762 187361019 -12269131 + L1PA7 LINE L1 5185 5447 -725 771 244 6 17 chr5 187361159 187361339 -12268811 - MER45A DNA AcHobo 0 178 1 279 258 208 25 chr5 187361719 187361839 -12268311 - L2 LINE L2 -2 3311 3170 7244 44 0 2 chr5 187363304 187364468 -12265682 - L1PA7 LINE L1 0 6154 4991 228 122 0 0 chr5 187364631 187364672 -12265478 + (TG)n Simple_repeat Simple_repeat 2 42 0 338 228 121 27 chr5 187364935 187365084 -12265066 + MER104 DNA Tc2 14 176 -4 207 315 11 54 chr5 187365572 187365664 -12264486 + MIR SINE MIR 5 92 -170 1774 116 11 14 chr5 187366480 187366755 -12263395 + AluSx SINE Alu 30 303 -9 23 33 0 0 chr5 187366987 187367017 -12263133 + AT_rich Low_complexity Low_complexity 1 30 0 280 333 56 33 chr5 187367152 187367321 -12262829 - MIR SINE MIR -62 146 15 735 318 89 4 chr5 187367696 187367932 -12262218 + MIR SINE MIR 1 256 -6 475 287 73 17 chr5 187368968 187369257 -12260893 + L1ME4a LINE L1 5612 5916 -205 3673 140 41 14 chr5 187369321 187369978 -12260172 + L1MA8 LINE L1 5554 6228 -63 5820 125 26 13 chr5 187369979 187370163 -12259987 - Tigger1 DNA MER2_type -6 2412 2232 2283 104 3 3 chr5 187370163 187370470 -12259680 + AluSq SINE Alu 1 307 -6 5820 125 26 13 chr5 187370470 187371220 -12258930 - Tigger1 DNA MER2_type -186 2232 1466 * 7705 129 34 30 chr5 187371209 187371807 -12258343 - Tigger1 DNA MER2_type -1115 1303 709 2489 7 0 0 chr5 187371807 187372078 -12258072 - AluYa5 SINE Alu -2 309 39 7705 129 34 30 chr5 187372078 187372777 -12257373 - Tigger1 DNA MER2_type -1709 709 1 28 61 0 0 chr5 187372805 187372854 -12257296 + AT_rich Low_complexity Low_complexity 1 49 0 199 233 0 0 chr5 187374559 187374602 -12255548 + L2 LINE L2 3263 3305 -8 314 260 130 0 chr5 187374833 187374933 -12255217 + L2 LINE L2 3158 3270 -2 22 88 0 0 chr5 187376670 187376727 -12253423 + AT_rich Low_complexity Low_complexity 1 57 0 262 243 9 81 chr5 187376765 187376820 -12253330 - MIR SINE MIR -91 171 126 2489 59 3 0 chr5 187376820 187377123 -12253027 + AluY SINE Alu 1 304 -7 262 243 9 81 chr5 187377123 187377178 -12252972 - MIR SINE MIR -136 126 69 402 259 76 23 chr5 187377953 187378084 -12252066 + MIR SINE MIR 115 252 -10 1746 195 112 31 chr5 187378894 187379351 -12250799 - MLT1D LTR MaLR 0 505 12 3203 158 25 18 chr5 187379620 187380221 -12249929 - L1MB7 LINE L1 -30 6154 5550 505 308 118 14 chr5 187381107 187381318 -12248832 + MIR SINE MIR 20 252 -10 817 235 84 39 chr5 187381380 187381665 -12248485 - L2 LINE L2 0 3313 3016 452 327 33 13 chr5 187382081 187382231 -12247919 - MIR SINE MIR -69 193 41 742 204 8 0 chr5 187382231 187382363 -12247787 - FLAM_A SINE Alu 0 133 1 449 257 71 14 chr5 187382735 187382875 -12247275 - MIR SINE MIR -54 208 61 2350 66 0 3 chr5 187383167 187383453 -12246697 + AluY SINE Alu 1 285 -26 215 257 167 35 chr5 187383544 187383688 -12246462 - MIR SINE MIR -64 198 36 934 214 16 0 chr5 187383932 187384114 -12246036 - MER5A DNA MER1_type 0 189 5 244 292 56 22 chr5 187384180 187384269 -12245881 + MIR SINE MIR 51 142 -120 23 0 0 0 chr5 187389090 187389113 -12241037 + AT_rich Low_complexity Low_complexity 1 23 0 383 323 144 10 chr5 187390175 187390370 -12239780 - MIR SINE MIR -10 252 32 566 262 102 22 chr5 187391603 187391828 -12238322 + MIR SINE MIR 20 262 0 22 35 0 0 chr5 187392154 187392183 -12237967 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 187392197 187392218 -12237932 + AT_rich Low_complexity Low_complexity 1 21 0 775 108 7 72 chr5 187392406 187392545 -12237605 - FLAM_A SINE Alu -3 130 1 28 91 0 0 chr5 187393226 187393303 -12236847 + AT_rich Low_complexity Low_complexity 1 77 0 671 298 53 20 chr5 187394062 187394307 -12235843 + MIR SINE MIR 1 253 -9 280 268 106 49 chr5 187395090 187395213 -12234937 - L2 LINE L2 -216 3056 2927 270 176 0 0 chr5 187395343 187395394 -12234756 + (TGGA)n Simple_repeat Simple_repeat 3 53 0 245 342 0 94 chr5 187396078 187396135 -12234015 + L2 LINE L2 3134 3176 -96 2304 95 7 0 chr5 187396135 187396430 -12233720 + AluSc SINE Alu 1 297 -12 245 342 0 94 chr5 187396430 187396489 -12233661 + L2 LINE L2 3176 3239 -33 392 298 99 21 chr5 187396642 187396680 -12233470 + L2 LINE L2 3094 3128 -185 2264 110 0 0 chr5 187396680 187396972 -12233178 - AluSx SINE Alu -20 292 1 392 298 99 21 chr5 187396972 187397124 -12233026 + L2 LINE L2 3128 3299 -14 250 354 12 0 chr5 187397537 187397619 -12232531 - L2 LINE L2 -209 3063 2981 207 371 35 91 chr5 187397615 187397847 -12232303 - L2 LINE L2 -81 3191 2973 * 233 365 37 0 chr5 187397915 187398022 -12232128 - L2 LINE L2 -453 2861 2751 25 31 0 0 chr5 187398590 187398622 -12231528 + AT_rich Low_complexity Low_complexity 1 32 0 245 309 12 12 chr5 187399474 187399558 -12230592 - MIR3 SINE MIR -13 195 112 29521 107 13 12 chr5 187400298 187405769 -12224381 - L1PA8 LINE L1 -3 6169 694 474 143 0 12 chr5 187405758 187405842 -12224308 - L1PA8 LINE L1 -6062 84 2 * 2273 121 3 0 chr5 187405848 187406155 -12223995 - AluSx SINE Alu -2 310 3 246 267 86 48 chr5 187407416 187407521 -12222629 + L3 LINE CR1 321 429 -1148 2016 125 7 14 chr5 187408041 187408338 -12221812 - AluSx SINE Alu -17 295 1 2365 95 0 3 chr5 187408761 187409067 -12221083 + AluSq SINE Alu 1 305 -8 355 287 35 83 chr5 187409217 187409447 -12220703 + MIR SINE MIR 1 219 -43 219 278 0 28 chr5 187410031 187410103 -12220047 + GA-rich Low_complexity Low_complexity 1 70 0 428 234 99 14 chr5 187410307 187410448 -12219702 + MIR SINE MIR 68 220 -42 327 298 11 11 chr5 187410469 187410563 -12219587 - MIR SINE MIR -131 131 38 622 190 91 0 chr5 187412261 187412382 -12217768 + Tigger1 DNA MER2_type 24 155 -2263 13608 107 38 5 chr5 187412388 187414431 -12215719 + Tigger1 DNA MER2_type 309 2417 -1 2256 98 19 3 chr5 187414802 187415109 -12215041 - AluSx SINE Alu 0 312 1 180 111 0 0 chr5 187415168 187415195 -12214955 + (A)n Simple_repeat Simple_repeat 1 27 0 2403 83 3 0 chr5 187415200 187415500 -12214650 + AluSp SINE Alu 3 303 -10 2163 104 7 3 chr5 187415893 187416180 -12213970 + AluSx SINE Alu 1 288 -24 1678 158 3 40 chr5 187416340 187416663 -12213487 - AluJo SINE Alu -1 311 1 309 274 17 68 chr5 187417177 187417469 -12212681 + L1ME4a LINE L1 5600 5876 -245 392 296 100 13 chr5 187418090 187418358 -12211792 - L1MC4a LINE L1 -154 5967 5675 239 281 122 0 chr5 187418367 187418449 -12211701 - L2 LINE L2 -2 3311 3220 788 158 22 14 chr5 187418475 187418614 -12211536 + FLAM_C SINE Alu 3 142 -1 4266 148 38 15 chr5 187418684 187419477 -12210673 + L1MC1 LINE L1 5510 6320 -13 3364 255 165 46 chr5 187419532 187420984 -12209166 - L2 LINE L2 -251 3062 1438 1677 186 36 0 chr5 187421029 187421308 -12208842 - AluJb SINE Alu -23 289 1 282 248 93 47 chr5 187421308 187421437 -12208713 - L1MC4a LINE L1 -516 5605 5471 616 320 34 17 chr5 187422089 187422323 -12207827 - MIR SINE MIR -24 238 1 22 0 0 0 chr5 187422476 187422498 -12207652 + AT_rich Low_complexity Low_complexity 1 22 0 286 258 47 31 chr5 187422818 187422946 -12207204 - MER117 DNA MER1_type -1 196 67 873 85 78 0 chr5 187423582 187423711 -12206439 - MER85 DNA T2_type 0 139 1 282 305 127 97 chr5 187424139 187424500 -12205650 + L2 LINE L2 2897 3268 -4 1958 250 47 58 chr5 187424834 187425469 -12204681 - MLT2E LTR ERVL 0 628 1 481 189 24 39 chr5 187425999 187426126 -12204024 - L1ME3 LINE L1 -1 6161 6037 27 62 0 0 chr5 187426184 187426232 -12203918 + AT_rich Low_complexity Low_complexity 1 48 0 522 307 39 17 chr5 187427203 187427382 -12202768 - MER5A DNA MER1_type 0 189 7 791 203 0 0 chr5 187427404 187427537 -12202613 - FLAM_A SINE Alu 0 133 1 2631 222 29 15 chr5 187428434 187429149 -12201001 - L1ME1 LINE L1 -5 6161 5437 2014 105 6 45 chr5 187429207 187429520 -12200630 + AluSq SINE Alu 1 301 -12 1655 138 56 15 chr5 187429524 187429793 -12200357 + AluSx SINE Alu 1 280 -32 1535 276 8 34 chr5 187435232 187435592 -12194558 - L1M2 LINE L1 -6356 493 148 2466 56 0 3 chr5 187435592 187435894 -12194256 - AluY SINE Alu -10 301 1 1535 276 8 34 chr5 187435894 187436029 -12194121 - L1M2 LINE L1 -6701 148 11 580 295 0 48 chr5 187436034 187436261 -12193889 + L2 LINE L2 3098 3313 0 363 313 82 24 chr5 187436788 187436996 -12193154 + MIR SINE MIR 2 221 -41 281 219 53 24 chr5 187437163 187437246 -12192904 - MIR SINE MIR -110 98 2 1025 277 123 49 chr5 187437389 187437798 -12192352 + L1MEc LINE L1 27 404 -5992 2321 92 0 7 chr5 187437798 187438101 -12192049 + AluSx SINE Alu 1 301 -11 1025 277 123 49 chr5 187438101 187438365 -12191785 + L1MEc LINE L1 404 647 -5749 2174 116 3 0 chr5 187438365 187438666 -12191484 + AluSp SINE Alu 1 302 -11 1025 277 123 49 chr5 187438666 187438837 -12191313 + L1MEc LINE L1 647 804 -5592 2280 77 0 13 chr5 187438837 187439135 -12191015 - AluY SINE Alu -17 294 1 1025 277 123 49 chr5 187439135 187439204 -12190946 + L1MEc LINE L1 804 1010 -5386 6088 229 10 16 chr5 187439314 187440980 -12189170 + HERVH LTR ERV1 2622 4290 -2297 331 146 82 59 chr5 187441028 187441139 -12189011 + LTR7 LTR ERV1 90 214 -236 428 98 0 107 chr5 187441336 187441448 -12188702 + LTR7 LTR ERV1 351 450 0 2224 164 31 22 chr5 187441642 187442086 -12188064 + LTR7 LTR ERV1 1 448 -2 1862 106 16 0 chr5 187442086 187442342 -12187808 + AluSx SINE Alu 35 294 -18 1496 141 21 3 chr5 187442596 187442879 -12187271 - HERVH LTR ERV1 -7425 288 1 1497 195 81 68 chr5 187442879 187443116 -12187034 - LTR7 LTR ERV1 0 450 203 2292 63 0 13 chr5 187443116 187443418 -12186732 - AluY SINE Alu -13 298 1 1497 195 81 68 chr5 187443418 187443622 -12186528 - LTR7 LTR ERV1 -247 203 3 331 250 0 0 chr5 187444029 187444109 -12186041 - L1MB8 LINE L1 -6 6172 6093 2185 74 0 11 chr5 187444117 187444437 -12185713 - AluY SINE Alu 0 317 1 1078 169 63 10 chr5 187444437 187444644 -12185506 - AluJb SINE Alu -13 299 82 2171 100 3 7 chr5 187444920 187445221 -12184929 + AluSx SINE Alu 1 300 -12 2173 47 38 63 chr5 187445223 187445542 -12184608 + AluY SINE Alu 1 311 0 639 130 9 28 chr5 187445559 187445667 -12184483 + AluSq SINE Alu 122 227 -86 180 0 0 0 chr5 187445669 187445689 -12184461 + (A)n Simple_repeat Simple_repeat 1 20 0 354 229 0 0 chr5 187445689 187445759 -12184391 - Tigger3(Golem) DNA MER2_type -2959 70 1 287 243 75 47 chr5 187446012 187446119 -12184031 - L2 LINE L2 0 3313 3204 424 297 49 20 chr5 187446401 187446647 -12183503 - L2 LINE L2 -378 2936 2684 2448 57 7 0 chr5 187446950 187447249 -12182901 - AluY SINE Alu -10 301 1 286 270 92 11 chr5 187447347 187447520 -12182630 + MIR SINE MIR 64 245 -17 1934 120 17 7 chr5 187447632 187447931 -12182219 - AluSx SINE Alu -10 302 1 940 220 38 0 chr5 187448133 187448342 -12181808 + Tigger3(Golem) DNA MER2_type 2813 3029 0 22 0 0 0 chr5 187448361 187448383 -12181767 + AT_rich Low_complexity Low_complexity 1 22 0 2308 76 0 19 chr5 187448394 187448709 -12181441 + AluY SINE Alu 1 309 -2 2034 114 14 0 chr5 187448718 187449035 -12181115 + AluSx SINE Alu 1 321 0 1053 157 0 0 chr5 187449035 187449201 -12180949 + AluSq SINE Alu 132 297 -16 1843 161 4 0 chr5 187449201 187449481 -12180669 - AluJo SINE Alu -31 281 1 1177 119 0 0 chr5 187449605 187449764 -12180386 + FRAM SINE Alu 1 158 -18 187 237 0 0 chr5 187450099 187450137 -12180013 - MIR SINE MIR -119 143 106 2397 45 3 22 chr5 187450610 187450921 -12179229 - AluY SINE Alu -6 305 1 351 342 126 22 chr5 187450956 187451362 -12178788 - L1ME4a LINE L1 0 6121 5685 2356 54 10 0 chr5 187451362 187451657 -12178493 - AluY SINE Alu -13 298 1 351 342 126 22 chr5 187451657 187451672 -12178478 - L1ME4a LINE L1 -436 5685 5673 865 138 0 0 chr5 187453261 187453391 -12176759 + FLAM_C SINE Alu 1 130 -3 2240 97 0 0 chr5 187453397 187453695 -12176455 + AluY SINE Alu 1 298 -13 2247 97 0 0 chr5 187453697 187453987 -12176163 + AluSx SINE Alu 1 290 -22 222 37 0 0 chr5 187453996 187454023 -12176127 + (TAAAA)n Simple_repeat Simple_repeat 5 31 0 237 158 0 0 chr5 187454069 187454107 -12176043 + MIR SINE MIR 110 147 -61 2104 54 65 37 chr5 187455224 187455518 -12174632 + AluY SINE Alu 1 302 -9 1701 168 7 23 chr5 187455521 187455824 -12174326 + AluSx SINE Alu 1 298 -14 631 189 0 0 chr5 187455826 187455937 -12174213 - AluJo/FLAM SINE Alu -201 111 1 2385 74 0 16 chr5 187455944 187456256 -12173894 - AluY SINE Alu -4 307 1 321 282 106 23 chr5 187456731 187457012 -12173138 + L2 LINE L2 2668 2986 -286 2188 84 0 7 chr5 187458497 187458811 -12171339 - AluY SINE Alu 0 312 1 781 235 24 14 chr5 187458813 187458956 -12171194 - Charlie5 DNA MER1_type -164 2460 2313 2116 134 0 0 chr5 187458956 187459262 -12170888 + AluSx SINE Alu 1 306 -6 781 235 24 14 chr5 187459262 187459331 -12170819 - Charlie5 DNA MER1_type -311 2313 2246 1411 191 18 73 chr5 187459396 187459747 -12170403 - AluJo SINE Alu 0 312 1 2268 81 0 0 chr5 187459778 187460087 -12170063 + AluSq SINE Alu 1 309 0 1401 130 5 23 chr5 187460100 187460315 -12169835 + AluSx SINE Alu 1 211 -101 2240 96 23 0 chr5 187460766 187461067 -12169083 - AluSx SINE Alu 0 312 5 240 35 0 0 chr5 187461297 187461326 -12168824 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 197 116 0 47 chr5 187461399 187461442 -12168708 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 2046 95 19 51 chr5 187461942 187462257 -12167893 + AluSx SINE Alu 3 307 -5 2542 36 0 3 chr5 187462259 187462561 -12167589 + AluY SINE Alu 3 303 -8 180 0 0 0 chr5 187462623 187462643 -12167507 + (TG)n Simple_repeat Simple_repeat 1 20 0 2291 119 0 0 chr5 187462803 187463115 -12167035 - AluSx SINE Alu 0 312 1 199 285 153 28 chr5 187463476 187463620 -12166530 + MIR SINE MIR 10 171 -91 200 257 19 76 chr5 187464492 187464597 -12165553 + MIR SINE MIR 1 99 -109 489 226 103 15 chr5 187465380 187465584 -12164566 + L2 LINE L2 2755 2976 -338 253 315 12 12 chr5 187465771 187465876 -12164274 - MIR SINE MIR -61 147 69 576 177 10 0 chr5 187468000 187468096 -12162054 - AluJo SINE Alu -90 222 126 791 179 0 36 chr5 187468108 187468237 -12161913 + AluJo SINE Alu 1 126 -186 1566 194 0 24 chr5 187468237 187468526 -12161624 - AluJb SINE Alu -23 289 8 204 336 65 19 chr5 187468758 187468865 -12161285 + MIR SINE MIR 38 149 -113 1958 114 3 56 chr5 187469806 187470130 -12160020 + AluSg SINE Alu 3 309 -1 2213 98 25 55 chr5 187470576 187470754 -12159396 - MER41A LTR ERV1 0 554 372 2240 101 0 13 chr5 187470754 187471062 -12159088 - AluSx SINE Alu -8 304 1 2213 98 25 55 chr5 187471062 187471314 -12158836 - MER41A LTR ERV1 -182 372 189 286 135 0 0 chr5 187471312 187471364 -12158786 - MER41A LTR ERV1 -314 240 189 * 1549 105 0 0 chr5 187471362 187471600 -12158550 - MER41A LTR ERV1 -314 240 3 207 313 75 83 chr5 187471723 187471963 -12158187 + L2 LINE L2 2941 3178 -94 246 326 22 0 chr5 187471974 187472066 -12158084 + L3 LINE CR1 552 645 -932 2414 53 7 13 chr5 187472235 187472538 -12157612 - AluY SINE Alu -10 301 1 1976 118 35 0 chr5 187472637 187472925 -12157225 - AluSx SINE Alu -14 298 1 395 298 26 46 chr5 187474430 187474581 -12155569 + MIR SINE MIR 27 174 -88 910 172 94 15 chr5 187475707 187475910 -12154240 - MER20 DNA MER1_type 0 219 1 298 288 187 14 chr5 187477907 187478046 -12152104 - MIR SINE MIR -96 166 4 2109 129 0 0 chr5 187478226 187478528 -12151622 + AluSx SINE Alu 1 302 -10 2124 109 0 0 chr5 187478529 187478813 -12151337 + AluSx SINE Alu 1 284 -28 425 109 0 254 chr5 187478917 187478993 -12151157 + L1MA9 LINE L1 5202 5202 -944 2199 122 0 3 chr5 187478993 187479305 -12150845 - AluSx SINE Alu -1 311 1 425 109 0 254 chr5 187479305 187479421 -12150729 + L1MA9 LINE L1 5201 5345 -801 1830 149 20 0 chr5 187479421 187479722 -12150428 - AluJb SINE Alu -5 307 1 2278 131 76 155 chr5 187479722 187480430 -12149720 + L1MA9 LINE L1 5661 6312 0 2109 104 7 16 chr5 187481273 187481580 -12148570 + AluSq SINE Alu 5 308 -5 2000 136 3 0 chr5 187481691 187481986 -12148164 - AluSq SINE Alu -17 296 1 1852 147 10 10 chr5 187482010 187482309 -12147841 - AluJb SINE Alu -13 299 1 25 75 0 0 chr5 187482333 187482386 -12147764 + AT_rich Low_complexity Low_complexity 1 53 0 2128 107 0 0 chr5 187482386 187482675 -12147475 - AluSx SINE Alu -9 303 15 813 181 27 7 chr5 187482683 187482862 -12147288 - FRAM SINE Alu 0 180 1 1984 82 57 0 chr5 187482930 187483210 -12146940 - AluSx SINE Alu -16 296 1 212 200 0 0 chr5 187483210 187483250 -12146900 - L2 LINE L2 -7 3306 3267 338 321 72 38 chr5 187483251 187483516 -12146634 - L2 LINE L2 -839 2475 2202 2587 36 3 0 chr5 187484028 187484336 -12145814 - AluY SINE Alu -2 309 1 24 0 0 0 chr5 187484542 187484566 -12145584 + AT_rich Low_complexity Low_complexity 1 24 0 1800 151 9 31 chr5 187484566 187484884 -12145266 + AluJo SINE Alu 1 311 -1 303 219 0 16 chr5 187484894 187484958 -12145192 + MIR SINE MIR 194 256 -6 2341 73 0 13 chr5 187485027 187485330 -12144820 + AluSq SINE Alu 1 299 -14 24 67 0 0 chr5 187486179 187486224 -12143926 + AT_rich Low_complexity Low_complexity 1 45 0 2024 100 0 7 chr5 187486603 187486884 -12143266 - AluSg SINE Alu -5 305 27 1807 131 3 14 chr5 187486886 187487177 -12142973 - AluSx SINE Alu -12 300 13 207 204 0 0 chr5 187487215 187487259 -12142891 + GA-rich Low_complexity Low_complexity 1 44 0 268 138 35 17 chr5 187487369 187487427 -12142723 - AluS SINE Alu -240 59 1 2064 120 13 0 chr5 187487461 187487762 -12142388 - AluSx SINE Alu -7 305 1 2062 107 38 0 chr5 187487772 187488062 -12142088 - AluSg SINE Alu -9 301 1 349 61 0 0 chr5 187488062 187488111 -12142039 + MADE1 DNA Mariner 32 80 0 251 310 19 45 chr5 187488144 187488299 -12141851 + L2 LINE L2 2889 3039 -233 342 236 195 24 chr5 187488491 187488614 -12141536 + MIR SINE MIR 12 155 -107 2467 59 3 0 chr5 187490374 187490678 -12139472 + AluSc SINE Alu 1 305 -4 1007 147 12 0 chr5 187490678 187490841 -12139309 + AluSg/x SINE Alu 134 298 -14 23 33 0 0 chr5 187493418 187493448 -12136702 + GC_rich Low_complexity Low_complexity 1 30 0 2474 37 0 3 chr5 187495135 187495432 -12134718 - AluY SINE Alu -14 297 2 1880 142 0 7 chr5 187496500 187496788 -12133362 - AluJo SINE Alu -26 286 1 605 266 40 9 chr5 187497333 187497555 -12132595 - L2 LINE L2 -211 3061 2833 180 270 122 0 chr5 187497760 187497834 -12132316 + L2 LINE L2 2920 3002 -270 2159 128 0 0 chr5 187497837 187498149 -12132001 - AluSq SINE Alu -1 312 1 270 129 48 0 chr5 187498152 187498214 -12131936 + CT-rich Low_complexity Low_complexity 2 66 0 1837 132 0 69 chr5 187498216 187498550 -12131600 - AluJo SINE Alu -1 311 1 182 313 16 0 chr5 187498550 187498614 -12131536 + L2 LINE L2 2996 3060 -212 194 279 0 0 chr5 187499179 187499222 -12130928 - L2 LINE L2 -17 3255 3213 * 389 271 127 0 chr5 187499221 187499339 -12130811 - MIR SINE MIR -92 170 38 275 0 29 0 chr5 187499608 187499643 -12130507 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 2348 72 7 10 chr5 187499662 187499968 -12130182 + AluSx SINE Alu 4 308 -4 704 224 53 11 chr5 187500150 187500429 -12129721 - L2 LINE L2 -253 3060 2771 1176 106 0 39 chr5 187500492 187500671 -12129479 - AluSg/x SINE Alu 0 310 139 1784 46 5 0 chr5 187500678 187500895 -12129255 - AluY SINE Alu -14 297 80 2316 93 3 3 chr5 187501018 187501330 -12128820 - AluSp SINE Alu -1 312 1 1774 119 119 4 chr5 187501349 187501617 -12128533 - AluSc SINE Alu 0 299 1 271 208 0 0 chr5 187501624 187501677 -12128473 - AluJ/monomer SINE Alu -4 298 246 468 282 0 0 chr5 187502490 187502607 -12127543 + MER53 DNA DNA 3 119 -70 993 119 7 0 chr5 187502617 187502768 -12127382 - AluSp/q SINE Alu -6 307 156 1366 102 0 0 chr5 187502798 187502984 -12127166 - AluSg/x SINE Alu 0 310 125 447 262 78 68 chr5 187503306 187503512 -12126638 + MIR SINE MIR 47 254 -8 240 233 292 0 chr5 187503958 187504078 -12126072 - L2 LINE L2 -3 3310 3156 1620 69 5 0 chr5 187504080 187504282 -12125868 - AluSp SINE Alu -16 297 95 552 145 0 0 chr5 187504415 187504498 -12125652 - AluSp SINE Alu -225 88 6 2101 101 20 0 chr5 187504505 187504801 -12125349 - AluSg SINE Alu -8 302 1 906 137 0 77 chr5 187504842 187505010 -12125140 - AluSg/x SINE Alu -29 281 127 2125 113 0 13 chr5 187505391 187505702 -12124448 + AluY SINE Alu 1 307 -4 2018 106 0 0 chr5 187505773 187506076 -12124074 + AluSx SINE Alu 1 303 0 404 276 19 45 chr5 187506689 187506845 -12123305 - MIR SINE MIR -82 180 29 182 231 0 0 chr5 187507008 187507047 -12123103 + MIR SINE MIR 109 147 -115 279 223 273 0 chr5 187507966 187508087 -12122063 - L2 LINE L2 -219 3053 2900 2124 113 0 13 chr5 187508237 187508539 -12121611 - AluSx SINE Alu -10 302 5 1807 125 16 40 chr5 187509038 187509342 -12120808 + AluSx SINE Alu 1 297 -15 327 295 170 8 chr5 187509345 187509586 -12120564 + L2 LINE L2 2698 2977 -337 210 183 0 100 chr5 187509659 187509719 -12120431 + L2 LINE L2 3206 3259 -13 2078 101 0 20 chr5 187509728 187510026 -12120124 - AluSx SINE Alu -20 292 1 2048 104 0 27 chr5 187510825 187511122 -12119028 - AluSx SINE Alu -23 289 1 945 156 0 28 chr5 187511223 187511403 -12118747 - AluSg/x SINE Alu 0 309 135 2182 54 50 0 chr5 187511529 187511807 -12118343 + AluY SINE Alu 1 292 -19 2139 112 3 0 chr5 187512062 187512356 -12117794 + AluSx SINE Alu 1 295 -17 307 202 0 95 chr5 187512358 187512442 -12117708 - L1MB8 LINE L1 -10 6168 6093 2383 57 0 10 chr5 187512445 187512742 -12117408 - AluY SINE Alu -17 294 1 1749 92 0 0 chr5 187512850 187513079 -12117071 - AluSx SINE Alu -82 230 2 1172 247 62 7 chr5 187513082 187513386 -12116764 - L1MB4 LINE L1 -42 6138 5818 1260 122 5 11 chr5 187513386 187513574 -12116576 - AluSg/x SINE Alu -17 293 107 2106 97 3 7 chr5 187513574 187513872 -12116278 - AluY SINE Alu -14 297 1 976 234 17 41 chr5 187513872 187514163 -12115987 - L1MB4 LINE L1 -363 5817 5534 24 0 0 0 chr5 187514198 187514222 -12115928 + AT_rich Low_complexity Low_complexity 1 24 0 640 218 18 35 chr5 187514236 187514286 -12115864 - Charlie5 DNA MER1_type -46 2578 2529 1946 111 57 3 chr5 187514286 187514583 -12115567 - AluSq SINE Alu 0 313 1 640 218 18 35 chr5 187514583 187514761 -12115389 - Charlie5 DNA MER1_type -95 2529 2354 1709 120 0 0 chr5 187514832 187515066 -12115084 + AluSx SINE Alu 1 234 -78 906 189 0 6 chr5 187515090 187515104 -12115046 + AluJb SINE Alu 120 133 -179 2192 79 10 3 chr5 187515104 187515395 -12114755 + AluY SINE Alu 1 293 -18 906 189 0 6 chr5 187515395 187515549 -12114601 + AluJb SINE Alu 133 287 -25 1757 128 75 4 chr5 187515549 187515830 -12114320 - AluSx SINE Alu -11 301 1 21 0 0 0 chr5 187515830 187515851 -12114299 + AT_rich Low_complexity Low_complexity 1 21 0 911 304 35 37 chr5 187521037 187521167 -12108983 - L1MC4a LINE L1 -1843 5965 5836 2163 75 27 7 chr5 187521167 187521459 -12108691 - AluY SINE Alu -13 298 1 911 304 35 37 chr5 187521459 187521609 -12108541 - L1MC4a LINE L1 -1972 5836 5687 1712 162 0 46 chr5 187521609 187521936 -12108214 - AluJb SINE Alu 0 312 1 911 304 35 37 chr5 187521936 187522167 -12107983 - L1MC4a LINE L1 -2121 5687 5454 790 207 28 39 chr5 187522260 187522308 -12107842 - MER45A DNA AcHobo -1403 178 131 2268 94 3 0 chr5 187522308 187522606 -12107544 + AluSx SINE Alu 1 299 -13 790 207 28 39 chr5 187522606 187522736 -12107414 - MER45A DNA AcHobo -1450 131 2 638 227 14 7 chr5 187523028 187523169 -12106981 - LTR16C LTR ERVL 0 491 350 878 122 0 58 chr5 187523177 187523316 -12106834 + FLAM_C SINE Alu 2 132 -1 726 249 82 41 chr5 187523342 187523611 -12106539 - LTR16C LTR ERVL -123 368 89 2068 114 0 10 chr5 187523733 187524041 -12106109 + AluSg SINE Alu 1 305 -5 271 72 4 4 chr5 187524530 187524573 -12105577 - AluSp/q SINE Alu -32 271 237 1986 134 0 7 chr5 187524647 187524946 -12105204 + AluSx SINE Alu 1 297 -15 338 302 36 21 chr5 187525604 187525745 -12104405 - MIR SINE MIR -71 137 13 1205 132 0 0 chr5 187526339 187526513 -12103637 - AluSg/x SINE Alu -3 309 136 3644 133 10 37 chr5 187526515 187527132 -12103018 - L1MA7 LINE L1 0 6291 5692 206 320 13 0 chr5 187527132 187527207 -12102943 + L2 LINE L2 3189 3264 -8 407 115 0 0 chr5 187527218 187527270 -12102880 - AluJ/FRAM SINE Alu -29 283 232 1930 108 56 36 chr5 187528469 187528775 -12101375 - AluSx SINE Alu 0 312 1 216 67 0 0 chr5 187529155 187529185 -12100965 + (TG)n Simple_repeat Simple_repeat 2 31 0 696 195 0 0 chr5 187529199 187529317 -12100833 - FLAM_C SINE Alu -15 118 1 1810 176 3 3 chr5 187529327 187529629 -12100521 - AluJb SINE Alu -10 302 1 447 350 40 55 chr5 187529644 187529918 -12100232 - L1MC4a LINE L1 -1890 5918 5649 1446 196 86 42 chr5 187529924 187530187 -12099963 - L1MB5 LINE L1 -1 6173 5923 2303 89 0 7 chr5 187530187 187530478 -12099672 - AluSq SINE Alu -11 302 14 1446 196 86 42 chr5 187530478 187530585 -12099565 - L1MB5 LINE L1 -251 5923 5781 2657 59 0 0 chr5 187530585 187530891 -12099259 + AluY SINE Alu 1 306 -5 1446 196 86 42 chr5 187530891 187530928 -12099222 - L1MB5 LINE L1 -393 5781 5747 300 327 159 0 chr5 187531503 187531616 -12098534 - L2 LINE L2 -20 3252 3122 285 301 126 14 chr5 187531816 187531959 -12098191 + MIR SINE MIR 47 205 -57 403 255 49 47 chr5 187534406 187534574 -12095576 + MIR SINE MIR 76 242 -20 404 301 94 28 chr5 187534597 187534710 -12095440 + MIR SINE MIR 31 135 -127 2133 142 30 110 chr5 187534710 187534803 -12095347 - Tigger2a DNA MER2_type -2275 433 334 2140 115 0 0 chr5 187534803 187535081 -12095069 - AluSg SINE Alu -32 278 1 2133 142 30 110 chr5 187535081 187535458 -12094692 - Tigger2a DNA MER2_type -2374 334 1 404 301 94 28 chr5 187535458 187535557 -12094593 + MIR SINE MIR 135 257 -5 231 233 0 0 chr5 187535570 187535613 -12094537 - L2 LINE L2 -6 3266 3224 258 333 36 51 chr5 187535760 187535898 -12094252 + MIR SINE MIR 28 163 -99 * 575 253 45 63 chr5 187535879 187536100 -12094050 - MIR SINE MIR 0 262 46 2011 135 11 0 chr5 187536441 187536750 -12093400 + AluSx SINE Alu 1 312 0 445 261 9 0 chr5 187536927 187537038 -12093112 + MIR SINE MIR 89 200 -62 231 328 0 0 chr5 187538541 187538605 -12091545 - MIR SINE MIR -67 141 78 2188 113 7 13 chr5 187539574 187539883 -12090267 - AluJb SINE Alu -5 307 1 2462 57 0 3 chr5 187541216 187541512 -12088638 + AluSc SINE Alu 1 295 -14 1200 89 26 47 chr5 187541512 187541702 -12088448 + L1PB1 LINE L1 5964 6149 -2 388 117 26 0 chr5 187542284 187542361 -12087789 + GA-rich Low_complexity Low_complexity 2 80 0 27 29 0 0 chr5 187543810 187543844 -12086306 + GC_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr5 187543880 187543908 -12086242 + GC_rich Low_complexity Low_complexity 1 28 0 29 0 0 0 chr5 187544362 187544391 -12085759 + GC_rich Low_complexity Low_complexity 1 29 0 297 75 0 0 chr5 187544940 187544980 -12085170 + (TG)n Simple_repeat Simple_repeat 2 41 0 414 300 72 36 chr5 187547660 187547883 -12082267 + MIR SINE MIR 11 241 -21 238 271 71 0 chr5 187548131 187548201 -12081949 + MIR SINE MIR 46 120 -142 316 317 87 12 chr5 187548328 187548489 -12081661 + MIR SINE MIR 31 203 -59 363 255 0 32 chr5 187548595 187548689 -12081461 - MIR SINE MIR -69 193 103 310 225 75 0 chr5 187548898 187548978 -12081172 + MIR SINE MIR 56 141 -121 1049 178 22 0 chr5 187549203 187549388 -12080762 + MER5A DNA MER1_type 1 189 0 389 305 104 71 chr5 187549403 187549815 -12080335 - L1M4 LINE L1 -2751 3395 2903 236 135 0 0 chr5 187550405 187550442 -12079708 - L2 LINE L2 0 3313 3277 274 256 13 26 chr5 187550692 187550770 -12079380 - MIR SINE MIR -158 104 28 486 311 101 13 chr5 187552278 187552506 -12077644 + MIR SINE MIR 11 258 -4 1741 173 14 0 chr5 187552526 187552835 -12077315 + AluJb SINE Alu 1 313 0 2628 46 10 0 chr5 187554036 187554340 -12075810 + AluY SINE Alu 1 307 -4 1203 208 185 8 chr5 187554360 187554754 -12075396 + MLT1F1 LTR MaLR 93 556 -11 451 279 109 18 chr5 187554848 187555013 -12075137 + MIR SINE MIR 31 210 -52 436 192 87 0 chr5 187557281 187557385 -12072765 - MIR SINE MIR -30 232 120 477 293 48 65 chr5 187557388 187557546 -12072604 + MIR SINE MIR 12 166 -96 2390 102 0 6 chr5 187557546 187557860 -12072290 + AluSx SINE Alu 1 312 0 477 293 48 65 chr5 187557860 187557930 -12072220 + MIR SINE MIR 166 236 -26 410 216 120 48 chr5 187558355 187558480 -12071670 + L2 LINE L2 3180 3313 0 306 226 198 9 chr5 187558635 187558741 -12071409 - MIR SINE MIR -71 191 66 23 54 0 0 chr5 187558741 187558778 -12071372 + AT_rich Low_complexity Low_complexity 1 37 0 2342 108 0 0 chr5 187558778 187559073 -12071077 - AluSx SINE Alu -17 295 1 1456 101 0 18 chr5 187559075 187559302 -12070848 - L1MA4A LINE L1 0 6303 6081 321 340 42 35 chr5 187559412 187559556 -12070594 + L2 LINE L2 3168 3312 -1 211 254 15 15 chr5 187562325 187562392 -12067758 + (TTCA)n Simple_repeat Simple_repeat 2 68 0 404 330 92 25 chr5 187562716 187562998 -12067152 - L2 LINE L2 -457 2857 2557 443 252 49 16 chr5 187563210 187563333 -12066817 + MIR SINE MIR 84 210 -52 754 270 50 9 chr5 187564327 187564549 -12065601 + MIR SINE MIR 15 245 -17 2439 87 3 7 chr5 187565017 187565326 -12064824 - AluSg SINE Alu -2 308 1 1938 160 0 17 chr5 187565372 187565665 -12064485 - AluSx SINE Alu -24 288 1 1613 162 40 4 chr5 187565671 187565949 -12064201 - AluJo SINE Alu -24 288 1 181 329 0 26 chr5 187566237 187566313 -12063837 + L2 LINE L2 3199 3272 0 561 296 57 50 chr5 187566672 187566921 -12063229 - MIR SINE MIR 0 262 8 695 140 0 18 chr5 187567588 187567702 -12062448 + AluSg/x SINE Alu 199 310 0 2196 111 3 3 chr5 187567908 187568206 -12061944 - AluSx SINE Alu -14 298 1 26 30 0 0 chr5 187568963 187568996 -12061154 + AT_rich Low_complexity Low_complexity 1 33 0 225 323 120 8 chr5 187570265 187570398 -12059752 - L2 LINE L2 -229 3043 2896 1976 140 7 3 chr5 187570859 187571183 -12058967 + AluJb SINE Alu 1 325 0 254 182 0 91 chr5 187571563 187571662 -12058488 + (CAGAGA)n Simple_repeat Simple_repeat 4 93 0 403 93 0 0 chr5 187571770 187571824 -12058326 - U13 snRNA snRNA -50 54 1 708 255 115 80 chr5 187572107 187572558 -12057592 - L2 LINE L2 0 3272 2806 2164 90 11 4 chr5 187572703 187573016 -12057134 + AluSx SINE Alu 1 315 0 231 239 0 0 chr5 187573755 187573801 -12056349 - L2 LINE L2 -17 3296 3251 312 333 0 0 chr5 187574473 187574560 -12055590 - MIR SINE MIR -150 112 26 1789 181 20 7 chr5 187574897 187575196 -12054954 + AluJb SINE Alu 1 303 -9 250 296 10 71 chr5 187575605 187575703 -12054447 + MIR SINE MIR 42 133 -75 1605 175 157 9 chr5 187575854 187576197 -12053953 + MSTD LTR MaLR 1 394 -2 2096 77 73 7 chr5 187576963 187577235 -12052915 - AluSg SINE Alu -20 290 1 660 132 0 184 chr5 187577244 187577396 -12052754 - FLAM_C SINE Alu -18 125 2 270 95 0 0 chr5 187577494 187577536 -12052614 + (A)n Simple_repeat Simple_repeat 1 42 0 468 253 156 39 chr5 187577676 187577795 -12052355 + MIR SINE MIR 63 205 -57 579 53 0 0 chr5 187577795 187577870 -12052280 + (TA)n Simple_repeat Simple_repeat 1 75 0 468 253 156 39 chr5 187577870 187577904 -12052246 + MIR SINE MIR 205 234 -28 207 0 0 0 chr5 187578547 187578570 -12051580 + (T)n Simple_repeat Simple_repeat 1 23 0 26 30 0 0 chr5 187579417 187579450 -12050700 + AT_rich Low_complexity Low_complexity 1 33 0 195 42 0 0 chr5 187579745 187579769 -12050381 + (CG)n Simple_repeat Simple_repeat 2 25 0 * 333 0 0 0 chr5 187579768 187579805 -12050345 + (CA)n Simple_repeat Simple_repeat 1 37 0 591 233 42 47 chr5 187580315 187580530 -12049620 + MER102b DNA MER1_type 128 341 0 694 313 12 21 chr5 187581299 187581539 -12048611 + MIR SINE MIR 6 243 -19 3113 79 23 14 chr5 187581572 187582015 -12048135 - L1PA15 LINE L1 -9 6156 5710 393 22 0 0 chr5 187582812 187582858 -12047292 + (A)n Simple_repeat Simple_repeat 1 46 0 514 260 175 7 chr5 187585485 187585639 -12044511 + MIR SINE MIR 13 192 -70 182 212 0 0 chr5 187585800 187585833 -12044317 + MIR SINE MIR 219 251 -11 2199 103 23 3 chr5 187586103 187586404 -12043746 - AluSg SINE Alu -3 307 1 1752 168 0 46 chr5 187586586 187586913 -12043237 + AluJb SINE Alu 1 312 0 2192 113 3 3 chr5 187586996 187587297 -12042853 - AluSg SINE Alu -9 301 1 722 130 0 17 chr5 187587303 187587418 -12042732 - FLAM_A SINE Alu -17 125 13 325 318 188 0 chr5 187587537 187587707 -12042443 + MIR SINE MIR 55 256 -6 21 0 0 0 chr5 187587954 187587975 -12042175 + AT_rich Low_complexity Low_complexity 1 21 0 230 274 65 57 chr5 187588354 187588389 -12041761 + L2 LINE L2 3185 3218 -95 2063 135 17 0 chr5 187588389 187588678 -12041472 - AluSp SINE Alu -19 294 1 230 274 65 57 chr5 187588678 187588766 -12041384 + L2 LINE L2 3218 3309 -4 192 362 154 26 chr5 187588804 187589116 -12041034 - L2 LINE L2 -5 3267 2916 * 309 276 102 39 chr5 187589098 187589225 -12040925 + MIR SINE MIR 6 140 -122 818 235 50 29 chr5 187589272 187589510 -12040640 - MIR SINE MIR 0 262 20 1656 121 4 4 chr5 187589528 187589785 -12040365 - L1PB2 LINE L1 -1 6150 5894 1864 171 3 0 chr5 187589855 187590148 -12040002 - AluJo SINE Alu -16 296 3 288 274 98 0 chr5 187590437 187590539 -12039611 - MIR SINE MIR -64 198 87 1400 141 52 4 chr5 187591148 187591417 -12038733 + L1MA5 LINE L1 6017 6298 -2 202 162 27 0 chr5 187591459 187591496 -12038654 + (TTAA)n Simple_repeat Simple_repeat 3 40 0 256 273 124 8 chr5 187592613 187592734 -12037416 + MIR SINE MIR 98 232 -30 183 100 0 0 chr5 187592810 187592840 -12037310 + (T)n Simple_repeat Simple_repeat 1 30 0 323 239 0 0 chr5 187593204 187593296 -12036854 - L1MA4A LINE L1 -24 6981 6890 575 148 34 13 chr5 187593299 187593448 -12036702 - L1MA4A LINE L1 -181 6824 6673 1000 130 43 12 chr5 187593450 187593612 -12036538 - AluSg/x SINE Alu -12 300 134 2389 80 0 7 chr5 187593612 187593914 -12036236 - AluSx SINE Alu -12 300 1 2085 145 7 0 chr5 187593923 187594233 -12035917 - AluSx SINE Alu 0 312 1 10386 164 30 13 chr5 187594235 187595771 -12034379 - L1MA4A LINE L1 -322 6683 5174 378 0 0 0 chr5 187595771 187595813 -12034337 + (TG)n Simple_repeat Simple_repeat 2 43 0 2323 82 3 3 chr5 187595814 187596108 -12034042 - AluSp SINE Alu -19 294 1 10386 164 30 13 chr5 187596108 187597512 -12032638 - L1MA4A LINE L1 -1830 5175 3696 732 187 38 27 chr5 187597581 187597764 -12032386 - MIR SINE MIR -49 213 31 2389 83 0 0 chr5 187599666 187599966 -12030184 - AluY SINE Alu -11 300 1 24 53 0 0 chr5 187599969 187600007 -12030143 + AT_rich Low_complexity Low_complexity 1 38 0 8242 186 29 14 chr5 187602290 187602553 -12027597 - L1MA4A LINE L1 -3136 3712 3454 1867 156 32 0 chr5 187602553 187602835 -12027315 + AluJo SINE Alu 1 291 -21 8242 186 29 14 chr5 187602835 187605124 -12025026 - L1MA4A LINE L1 -3394 3454 1120 558 265 21 21 chr5 187605142 187605331 -12024819 - L1MA4A LINE L1 -6314 535 347 277 286 61 58 chr5 187656826 187657021 -11973129 - MIR SINE MIR -50 212 12 955 285 123 40 chr5 187657261 187657790 -11972360 - MLT1K LTR MaLR -8 580 8 2482 152 73 4 chr5 187657891 187658345 -11971805 + MER31A LTR ERV1 1 485 0 234 156 0 0 chr5 187658981 187659026 -11971124 + A-rich Low_complexity Low_complexity 1 45 0 27 0 0 0 chr5 187659332 187659359 -11970791 + AT_rich Low_complexity Low_complexity 1 27 0 333 0 0 0 chr5 187659564 187659601 -11970549 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 232 288 55 14 chr5 187659620 187659693 -11970457 - L2 LINE L2 -50 3263 3188 286 311 34 8 chr5 187659718 187659837 -11970313 - L2 LINE L2 -2 3311 3190 491 236 16 16 chr5 187659878 187660001 -11970149 - L2 LINE L2 0 3313 3191 396 285 1 3 chr5 187660763 187660876 -11969274 - MIR SINE MIR -62 146 43 256 326 63 0 chr5 187661127 187661222 -11968928 - MIR SINE MIR -12 250 150 814 244 232 13 chr5 187661258 187661651 -11968499 - L2 LINE L2 -2 3311 2833 493 254 183 10 chr5 187662171 187662368 -11967782 - MIR SINE MIR -1 261 31 194 188 42 21 chr5 187662623 187662671 -11967479 + MIR SINE MIR 69 117 -145 348 302 0 0 chr5 187662823 187662909 -11967241 - MIR SINE MIR -58 150 65 243 222 0 0 chr5 187663022 187663103 -11967047 + G-rich Low_complexity Low_complexity 3 83 0 2479 87 0 0 chr5 187663445 187663754 -11966396 - AluSc SINE Alu 0 309 1 422 285 46 6 chr5 187663784 187663955 -11966195 - MIR SINE MIR -65 143 17 290 324 37 0 chr5 187664747 187664855 -11965295 - MIR SINE MIR -65 197 86 394 286 83 0 chr5 187664943 187665076 -11965074 - MIR3 SINE MIR -61 147 4 1019 243 78 48 chr5 187665093 187665597 -11964553 - MLT1K LTR MaLR 0 588 40 891 177 44 0 chr5 187665625 187665806 -11964344 - MER5A DNA MER1_type 0 189 1 1578 270 130 60 chr5 187665885 187666481 -11963669 + Charlie2b DNA MER1_type 53 606 -2176 252 0 0 0 chr5 187666481 187666509 -11963641 + (CCTA)n Simple_repeat Simple_repeat 2 29 0 1578 270 130 60 chr5 187666509 187666726 -11963424 + Charlie2b DNA MER1_type 606 806 -1976 1853 154 10 26 chr5 187666726 187667037 -11963113 - AluSx SINE Alu -6 306 1 1578 270 130 60 chr5 187667037 187667289 -11962861 + Charlie2b DNA MER1_type 806 1194 -1588 2458 81 3 0 chr5 187667914 187668212 -11961938 - AluSp SINE Alu -14 299 1 2450 106 0 0 chr5 187668219 187668531 -11961619 - AluSx SINE Alu 0 312 1 428 319 196 4 chr5 187668537 187668807 -11961343 - L2 LINE L2 -16 3256 2935 896 173 13 89 chr5 187669116 187669353 -11960797 + MER20 DNA MER1_type 1 219 0 1307 191 26 122 chr5 187669353 187669457 -11960693 - L1MC5 LINE L1 -755 7206 7094 2685 58 0 0 chr5 187669457 187669766 -11960384 + AluY SINE Alu 2 310 -1 1307 191 26 122 chr5 187669766 187669939 -11960211 - L1MC5 LINE L1 -867 7094 6906 2125 131 3 0 chr5 187669939 187670236 -11959914 - AluSx SINE Alu -14 298 1 1307 191 26 122 chr5 187670236 187670500 -11959650 - L1MC5 LINE L1 -1055 6906 6716 2150 100 0 94 chr5 187670592 187670932 -11959218 + AluSg SINE Alu 1 308 -2 219 250 33 0 chr5 187671527 187671587 -11958563 + CT-rich Low_complexity Low_complexity 5 66 0 205 274 0 20 chr5 187671708 187671759 -11958391 - L2 LINE L2 -107 3165 3116 1787 141 4 11 chr5 187672089 187672366 -11957784 - AluJo SINE Alu 0 312 38 373 313 0 0 chr5 187672366 187672478 -11957672 + MLT1L LTR MaLR 128 239 -376 694 104 9 0 chr5 187672528 187672634 -11957516 - AluJ SINE Alu -8 304 198 967 147 7 13 chr5 187672635 187672785 -11957365 - AluJ SINE Alu -163 149 1 540 258 86 42 chr5 187672794 187673088 -11957062 + MLT1L LTR MaLR 263 511 0 1739 160 24 17 chr5 187673313 187673601 -11956549 - AluJb SINE Alu -22 290 1 193 209 47 0 chr5 187673699 187673742 -11956408 - L2 LINE L2 -15 3298 3254 319 240 48 0 chr5 187673916 187674041 -11956109 - MER113 DNA MER1_type? -352 169 39 1229 211 39 0 chr5 187674383 187674643 -11955507 + MER82 DNA MER2_type 2 271 -382 867 221 7 112 chr5 187674646 187674777 -11955373 + MER82 DNA MER2_type 399 542 -111 1811 137 90 0 chr5 187674777 187675054 -11955096 + AluSg SINE Alu 1 302 -8 867 221 7 112 chr5 187675054 187675105 -11955045 + MER82 DNA MER2_type 542 597 -56 2480 74 7 0 chr5 187675105 187675414 -11954736 + AluY SINE Alu 1 311 0 867 221 7 112 chr5 187675414 187675515 -11954635 + MER82 DNA MER2_type 597 653 0 797 9 27 9 chr5 187675516 187675627 -11954523 + (TAGA)n Simple_repeat Simple_repeat 2 114 0 267 261 15 0 chr5 187675766 187675831 -11954319 + MLT1K LTR MaLR 517 582 -6 187 167 0 0 chr5 187675844 187675874 -11954276 + L2 LINE L2 3226 3255 -17 266 300 130 90 chr5 187676662 187676953 -11953197 + L2 LINE L2 2384 2705 -609 2483 72 3 22 chr5 187676953 187677272 -11952878 - AluSq SINE Alu 0 313 1 266 300 130 90 chr5 187677272 187677480 -11952670 + L2 LINE L2 2705 2903 -411 323 323 47 8 chr5 187677659 187677786 -11952364 + MLT1K LTR MaLR 422 553 -35 567 236 35 0 chr5 187677961 187678105 -11952045 - MIR SINE MIR -50 212 64 1805 40 0 0 chr5 187678126 187678351 -11951799 - L1PA5 LINE L1 -51 6103 5879 366 258 61 45 chr5 187678421 187678553 -11951597 - L2 LINE L2 0 3313 3180 762 207 24 6 chr5 187679079 187679243 -11950907 - MER117 DNA MER1_type -21 176 10 415 241 56 19 chr5 187679260 187679368 -11950782 + MIR3 SINE MIR 82 193 -15 262 214 214 8 chr5 187679668 187679785 -11950365 - MIR SINE MIR -102 160 20 660 221 55 39 chr5 187680020 187680201 -11949949 + MLT1J2 LTR MaLR 73 256 -194 263 175 0 63 chr5 187680272 187680335 -11949815 + MLT1J2 LTR MaLR 391 449 -1 180 333 61 0 chr5 187680373 187680439 -11949711 + L2 LINE L2 3106 3175 -97 814 281 48 0 chr5 187680524 187680755 -11949395 + MIR SINE MIR 8 249 -13 215 245 0 0 chr5 187681937 187681990 -11948160 + (TGAA)n Simple_repeat Simple_repeat 3 55 0 234 136 0 0 chr5 187682012 187682056 -11948094 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 664 245 5 64 chr5 187682919 187682961 -11947189 - MIR SINE MIR -79 183 140 2292 82 3 33 chr5 187682961 187683265 -11946885 - AluSq SINE Alu -18 295 1 664 245 5 64 chr5 187683265 187683410 -11946740 - MIR SINE MIR -122 140 7 256 326 207 0 chr5 187684657 187684850 -11945300 + MIR SINE MIR 30 262 0 372 305 30 23 chr5 187684877 187685008 -11945142 - MIR SINE MIR -111 151 20 294 272 46 30 chr5 187685950 187686099 -11944051 + MIR3 SINE MIR 1 156 -65 603 283 150 0 chr5 187686510 187686690 -11943460 - MIR SINE MIR -9 253 47 498 314 12 12 chr5 187686872 187687044 -11943106 - MIR SINE MIR 0 262 91 193 250 0 0 chr5 187687248 187687308 -11942842 - MIR SINE MIR -84 124 65 185 274 116 32 chr5 187687946 187688041 -11942109 - MIR SINE MIR -6 256 154 346 301 15 23 chr5 187688207 187688340 -11941810 - MIR SINE MIR -129 133 2 1031 264 101 26 chr5 187688635 187689021 -11941129 + MLT1J2 LTR MaLR 36 450 0 249 292 124 9 chr5 187689180 187689293 -11940857 - L2 LINE L2 -10 3262 3137 449 226 23 129 chr5 187689409 187689626 -11940524 - Charlie8 DNA MER1_type -2152 265 72 2160 116 0 0 chr5 187689705 187689982 -11940168 + AluSq SINE Alu 1 277 -36 182 33 67 0 chr5 187689984 187690014 -11940136 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1776 122 37 0 chr5 187691568 187691813 -11938337 - AluJb SINE Alu -24 288 35 25 0 0 0 chr5 187691813 187691838 -11938312 + AT_rich Low_complexity Low_complexity 1 25 0 463 246 92 8 chr5 187692139 187692269 -11937881 + MER8 DNA MER2_type 2 142 -97 435 351 49 63 chr5 187692430 187692714 -11937436 - L1MC/D LINE L1 -2150 5635 5349 383 56 19 0 chr5 187692818 187692872 -11937278 + (TGAA)n Simple_repeat Simple_repeat 2 56 0 2288 113 10 0 chr5 187692885 187693187 -11936963 + AluSx SINE Alu 1 305 -7 3813 155 15 68 chr5 187693275 187693862 -11936288 + L1MB2 LINE L1 5395 5929 -242 2318 82 3 23 chr5 187693862 187694165 -11935985 - AluSq SINE Alu -16 297 1 3813 155 15 68 chr5 187694165 187694385 -11935765 + L1MB2 LINE L1 5929 6159 -12 196 215 70 0 chr5 187694977 187695073 -11935077 - MIR SINE MIR -1 261 71 376 246 44 9 chr5 187695817 187696167 -11933983 + (CA)n Simple_repeat Simple_repeat 1 362 0 513 184 0 26 chr5 187697101 187697253 -11932897 + GA-rich Low_complexity Low_complexity 3 150 0 187 269 218 0 chr5 187697271 187697349 -11932801 - MIR SINE MIR -6 256 162 2288 108 3 0 chr5 187697530 187697825 -11932325 + AluSx SINE Alu 1 296 -16 553 280 0 13 chr5 187698039 187698196 -11931954 - MIR SINE MIR -52 210 56 2150 125 3 7 chr5 187698772 187699076 -11931074 - AluSx SINE Alu -9 303 1 1449 211 4 4 chr5 187699083 187699353 -11930797 - AluJo SINE Alu -14 298 29 774 156 0 0 chr5 187699440 187699575 -11930575 + CT-rich Low_complexity Low_complexity 2 136 0 1149 62 0 31 chr5 187699575 187699735 -11930415 - L1PA7 LINE L1 0 6154 6000 368 286 48 53 chr5 187699747 187699936 -11930214 - MIR SINE MIR -48 214 27 316 318 176 12 chr5 187700455 187700625 -11929525 - MIR SINE MIR 0 262 65 321 289 40 59 chr5 187700668 187700820 -11929330 + MIR SINE MIR 111 259 -3 228 238 12 75 chr5 187700838 187700918 -11929232 - L2 LINE L2 -84 3229 3155 191 238 203 35 chr5 187701402 187701545 -11928605 + MIR SINE MIR 42 208 -54 595 305 6 12 chr5 187701571 187701776 -11928374 - MIR SINE MIR -10 252 50 2348 113 7 0 chr5 187701793 187702103 -11928047 + AluSx SINE Alu 1 312 0 884 196 5 5 chr5 187702359 187702548 -11927602 + MER53 DNA DNA 1 189 0 2083 110 0 68 chr5 187702660 187702986 -11927164 - AluSx SINE Alu -8 304 1 660 226 83 74 chr5 187703123 187703197 -11926953 + MER58A DNA MER1_type 5 77 -2343 2374 93 0 3 chr5 187703197 187703497 -11926653 + AluSg SINE Alu 1 299 -11 660 226 83 74 chr5 187703497 187703639 -11926511 + MER58A DNA MER1_type 77 223 -1 31 26 0 0 chr5 187703838 187703876 -11926274 + AT_rich Low_complexity Low_complexity 1 38 0 818 107 0 0 chr5 187703876 187703988 -11926162 - FLAM_C SINE Alu -17 116 5 724 102 16 39 chr5 187704564 187704691 -11925459 - LTR40a LTR ERVL 0 519 396 424 261 0 22 chr5 187704695 187704787 -11925363 + L1MC4 LINE L1 6614 6703 -1339 760 23 0 0 chr5 187704791 187704879 -11925271 - L1PA7 LINE L1 -20 6134 6047 1083 251 162 6 chr5 187704883 187705217 -11924933 - LTR40a LTR ERVL -112 407 22 1094 122 58 0 chr5 187705217 187705373 -11924777 + AluSg/x SINE Alu 136 300 -12 830 156 91 13 chr5 187705597 187705751 -11924399 + FRAM SINE Alu 1 166 0 2344 226 12 27 chr5 187705995 187706557 -11923593 + MLT2B3 LTR ERVL 1 554 0 510 256 19 72 chr5 187706626 187706833 -11923317 - L2 LINE L2 -162 3110 2915 202 293 17 0 chr5 187706868 187706926 -11923224 - L2 LINE L2 -396 2917 2859 512 341 11 38 chr5 187707573 187707841 -11922309 - HERV16-D LTR ERVL -2230 3424 3168 2140 127 0 10 chr5 187707841 187708141 -11922009 - AluSx SINE Alu -4 308 12 1450 308 5 11 chr5 187708153 187708598 -11921552 - HERV16-D LTR ERVL -2545 3219 2778 1009 104 0 7 chr5 187708607 187708742 -11921408 - AluSg/x SINE Alu -12 300 167 664 370 55 3 chr5 187708749 187709060 -11921090 - HERV16-D LTR ERVL -2264 2732 2405 * 1740 291 84 18 chr5 187709058 187709712 -11920438 - HERV16-D LTR ERVL -4165 831 135 497 305 18 12 chr5 187709869 187710033 -11920117 - LTR16A LTR ERVL -258 192 28 259 171 29 152 chr5 187710236 187710290 -11919860 - MIR SINE MIR -69 193 157 2340 91 3 0 chr5 187710290 187710587 -11919563 - AluSp SINE Alu -15 298 1 259 171 29 152 chr5 187710587 187710637 -11919513 - MIR SINE MIR -105 157 102 196 373 95 27 chr5 187711369 187711707 -11918443 + L2 LINE L2 2243 2603 -711 2016 94 73 4 chr5 187711893 187712168 -11917982 - AluSp SINE Alu -10 303 10 2338 96 0 3 chr5 187712330 187712623 -11917527 - AluSg SINE Alu -18 292 1 289 54 0 0 chr5 187712715 187712752 -11917398 - U1 snRNA snRNA -128 37 1 1881 158 25 3 chr5 187712884 187713038 -11917112 - AluJb SINE Alu -21 291 127 213 39 0 0 chr5 187713038 187713064 -11917086 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1881 158 25 3 chr5 187713064 187713194 -11916956 - AluJb SINE Alu -185 127 1 22 56 0 0 chr5 187713194 187713230 -11916920 + AT_rich Low_complexity Low_complexity 1 36 0 2000 193 10 37 chr5 187713230 187713635 -11916515 - MLT2D LTR ERVL -20 394 1 283 278 0 0 chr5 187713663 187713735 -11916415 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 231 167 0 0 chr5 187713767 187713809 -11916341 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 272 331 23 8 chr5 187713821 187713951 -11916199 + (TGGG)n Simple_repeat Simple_repeat 3 134 0 427 270 46 40 chr5 187714264 187714438 -11915712 + MIR SINE MIR 82 256 -6 297 51 0 0 chr5 187714834 187714873 -11915277 + (CA)n Simple_repeat Simple_repeat 1 39 0 570 301 69 1 chr5 187714913 187715123 -11915027 + MIR SINE MIR 26 249 -13 534 219 24 53 chr5 187715284 187715301 -11914849 - L1MA10 LINE L1 -1 6333 6317 1350 228 48 33 chr5 187715301 187715700 -11914450 - L1ME1 LINE L1 -5 6161 5757 204 97 0 0 chr5 187715766 187715797 -11914353 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 188 317 33 0 chr5 187715798 187715858 -11914292 - L2 LINE L2 -13 3300 3239 408 40 0 0 chr5 187715861 187715911 -11914239 + (TA)n Simple_repeat Simple_repeat 2 51 0 311 320 123 10 chr5 187715920 187716123 -11914027 - L2 LINE L2 -56 3257 3032 1277 264 93 24 chr5 187716232 187716812 -11913338 - L2 LINE L2 -1049 2265 1646 2350 98 0 0 chr5 187716995 187717291 -11912859 - AluSg SINE Alu -12 298 3 533 230 9 0 chr5 187717725 187717838 -11912312 - MER81 DNA DNA 0 114 1 641 274 106 0 chr5 187717933 187718112 -11912038 + MIR SINE MIR 57 254 -8 282 267 27 0 chr5 187718533 187718608 -11911542 + L2 LINE L2 3182 3258 -14 465 289 81 24 chr5 187718617 187718690 -11911460 - MIR SINE MIR -27 235 168 2402 84 0 3 chr5 187718690 187718989 -11911161 - AluSc SINE Alu -11 298 1 465 289 81 24 chr5 187718989 187719126 -11911024 - MIR SINE MIR -94 168 13 387 278 66 55 chr5 187719302 187719527 -11910623 + MIR SINE MIR 33 262 0 233 333 35 21 chr5 187719647 187719791 -11910359 - L2 LINE L2 -1041 2273 2128 1962 160 3 16 chr5 187720222 187720529 -11909621 + AluSx SINE Alu 1 303 -9 181 273 18 0 chr5 187723079 187723134 -11907016 - MIR SINE MIR -161 101 46 225 326 139 49 chr5 187723552 187723840 -11906310 - L2 LINE L2 -37 3235 2922 187 167 21 0 chr5 187724239 187724287 -11905863 + MIR SINE MIR 81 129 -79 1653 173 0 51 chr5 187724592 187724904 -11905246 - AluJo SINE Alu -14 298 3 645 96 0 0 chr5 187724953 187725047 -11905103 + (TCCA)n Simple_repeat Simple_repeat 4 97 0 305 348 64 0 chr5 187725187 187725328 -11904822 + MIR SINE MIR 65 214 -48 310 228 133 13 chr5 187725895 187726053 -11904097 - L2 LINE L2 -213 3059 2883 278 312 46 18 chr5 187726133 187726242 -11903908 - MIR SINE MIR -87 175 64 395 285 158 15 chr5 187727290 187727499 -11902651 - MIR SINE MIR -23 239 3 225 0 0 0 chr5 187727685 187727710 -11902440 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 959 151 0 11 chr5 187727718 187727897 -11902253 + (TCCA)n Simple_repeat Simple_repeat 2 178 0 187 284 0 45 chr5 187727962 187728029 -11902121 - MIR3 SINE MIR -3 205 142 240 264 10 42 chr5 187728055 187728172 -11901978 - MIR SINE MIR -63 145 33 2136 236 123 36 chr5 187728205 187728387 -11901763 - L2 LINE L2 -432 2882 2717 2299 123 0 0 chr5 187728387 187728696 -11901454 + AluSx SINE Alu 1 309 -3 2136 236 123 36 chr5 187728696 187729226 -11900924 - L2 LINE L2 -597 2717 2108 182 211 18 70 chr5 187729175 187729232 -11900918 - L3 LINE CR1 -936 641 588 * 344 248 10 0 chr5 187729560 187729660 -11900490 - MIR SINE MIR -57 151 95 2112 114 17 17 chr5 187729742 187730041 -11900109 - AluSq SINE Alu -12 301 3 775 216 106 0 chr5 187730104 187730312 -11899838 - MER102a DNA MER1_type -9 321 92 303 194 87 36 chr5 187730391 187730502 -11899648 + MIR SINE MIR 11 130 -78 192 167 0 0 chr5 187731019 187731049 -11899101 - L2 LINE L2 -18 3295 3266 507 316 83 39 chr5 187731152 187731795 -11898355 + L2 LINE L2 2418 3091 -181 26 0 0 0 chr5 187731901 187731927 -11898223 + AT_rich Low_complexity Low_complexity 1 26 0 2022 117 0 13 chr5 187731927 187732226 -11897924 - AluSx SINE Alu -17 295 1 727 258 60 0 chr5 187732319 187732486 -11897664 - MIR SINE MIR -31 231 55 480 299 22 8 chr5 187732531 187732665 -11897485 + L2 LINE L2 3136 3271 -1 900 192 0 11 chr5 187732930 187733107 -11897043 + FRAM SINE Alu 1 175 -1 222 292 44 53 chr5 187733156 187733269 -11896881 - MIR SINE MIR -115 147 36 222 240 0 0 chr5 187733552 187733602 -11896548 + T-rich Low_complexity Low_complexity 1 50 0 450 245 126 85 chr5 187733893 187734509 -11895641 - L1ME4a LINE L1 -121 6000 5357 4360 128 17 39 chr5 187734509 187734649 -11895501 - L1PA15 LINE L1 0 6165 6024 2153 115 3 0 chr5 187734649 187734953 -11895197 - AluSp SINE Alu -8 305 1 4360 128 17 39 chr5 187734953 187735560 -11894590 - L1PA15 LINE L1 -141 6024 5434 450 245 126 85 chr5 187735560 187735631 -11894519 - L1ME4a LINE L1 -764 5357 5290 219 244 0 0 chr5 187736283 187736324 -11893826 + polypyrimidine Low_complexity Low_complexity 5 45 0 336 208 0 0 chr5 187736739 187736811 -11893339 + MER116 DNA Mariner 9 80 0 242 266 131 37 chr5 187736891 187737105 -11893045 - L1ME4a LINE L1 -114 6007 5774 930 260 130 29 chr5 187737344 187737690 -11892460 - L2 LINE L2 0 3313 2933 225 174 0 22 chr5 187737860 187737906 -11892244 - L2 LINE L2 0 3313 3269 335 248 20 50 chr5 187738580 187738598 -11891552 + MIR SINE MIR 47 64 -198 1664 156 0 33 chr5 187738598 187738935 -11891215 - AluJb SINE Alu 0 312 1 335 248 20 50 chr5 187738935 187739017 -11891133 + MIR SINE MIR 64 144 -118 289 206 123 27 chr5 187739019 187739092 -11891058 + MLT1L LTR MaLR 1 80 -535 275 274 116 21 chr5 187739134 187739229 -11890921 + MLT1L LTR MaLR 181 284 -331 731 291 141 19 chr5 187739896 187740315 -11889835 + MLT1L LTR MaLR 145 614 -1 257 73 171 0 chr5 187740540 187740581 -11889569 - MLT2D LTR ERVL 0 464 417 1894 191 59 8 chr5 187740619 187740975 -11889175 - MLT2D LTR ERVL -40 374 1 538 219 13 77 chr5 187741482 187741596 -11888554 + MER5B DNA MER1_type 8 111 -67 2045 117 0 7 chr5 187741596 187741896 -11888254 - AluSx SINE Alu -14 298 1 538 219 13 77 chr5 187741896 187741936 -11888214 + MER5B DNA MER1_type 111 152 -26 1027 129 93 10 chr5 187742544 187742737 -11887413 + L1PA16 LINE L1 5958 6166 0 564 177 5 48 chr5 187742766 187742952 -11887198 + GA-rich Low_complexity Low_complexity 3 180 0 457 275 5 31 chr5 187743693 187743852 -11886298 - MIR SINE MIR -62 146 16 247 395 28 0 chr5 187744049 187744158 -11885992 - L2 LINE L2 -10 3262 3151 338 263 109 86 chr5 187745613 187745788 -11884362 - L2 LINE L2 -174 3098 2920 * 401 272 133 12 chr5 187745786 187745959 -11884191 + MIR SINE MIR 36 229 -33 312 243 44 97 chr5 187745970 187746176 -11883974 + L2 LINE L2 2929 3123 -190 285 329 120 10 chr5 187746661 187746953 -11883197 - LTR16C LTR ERVL -28 463 140 451 191 45 36 chr5 187747945 187748055 -11882095 - MLT1J2 LTR MaLR -278 172 62 3523 72 62 6 chr5 187748704 187749189 -11880961 - L1PA8 LINE L1 0 6172 5661 452 292 52 52 chr5 187749466 187749699 -11880451 - Charlie8 DNA MER1_type -2129 288 56 255 125 0 0 chr5 187749767 187749807 -11880343 + (TG)n Simple_repeat Simple_repeat 2 41 0 205 265 54 129 chr5 187750056 187750203 -11879947 + L2 LINE L2 3178 3313 0 309 176 15 44 chr5 187750615 187750683 -11879467 - MER96 DNA MER1_type? -93 82 17 863 122 13 39 chr5 187750972 187751128 -11879022 + L1MB7 LINE L1 6014 6165 -19 752 216 75 53 chr5 187751985 187752212 -11877938 - MLT1K LTR MaLR -27 561 330 565 335 32 23 chr5 187752254 187752472 -11877678 - MLT1K LTR MaLR -368 220 1 2163 121 0 0 chr5 187752516 187752821 -11877329 + AluSx SINE Alu 1 305 -7 2695 139 29 2 chr5 187752927 187753372 -11876778 - L1PA16 LINE L1 -1 6165 5709 796 117 36 36 chr5 187754198 187754335 -11875815 - L1PA7 LINE L1 -1870 4276 4140 8230 80 4 7 chr5 187754335 187756186 -11873964 + L1PA7 LINE L1 4278 6132 -22 522 0 0 0 chr5 187756186 187756244 -11873906 + (TA)n Simple_repeat Simple_repeat 1 58 0 8230 80 4 7 chr5 187756244 187756264 -11873886 + L1PA7 LINE L1 6132 6151 -3 406 283 9 9 chr5 187757049 187757155 -11872995 + MIR SINE MIR 18 123 -139 480 307 11 17 chr5 187757857 187758036 -11872114 + CT-rich Low_complexity Low_complexity 2 179 0 612 222 92 92 chr5 187758171 187758339 -11871811 - L1MC4a LINE L1 -157 5964 5792 2339 58 0 7 chr5 187758339 187758634 -11871516 - AluY SINE Alu -18 293 1 612 222 92 92 chr5 187758634 187758727 -11871423 - L1MC4a LINE L1 -328 5793 5701 566 264 97 0 chr5 187758751 187758906 -11871244 - MIR SINE MIR -1 261 92 599 288 108 13 chr5 187758952 187759268 -11870882 - L1MC4a LINE L1 -2199 5609 5264 2177 115 0 3 chr5 187759384 187759697 -11870453 + AluSx SINE Alu 1 312 0 312 267 35 52 chr5 187759850 187760022 -11870128 - L1ME3A LINE L1 -223 5947 5779 1135 294 94 13 chr5 187760042 187760825 -11869325 - L1ME3A LINE L1 -697 5545 4700 813 264 133 79 chr5 187760838 187761078 -11869072 - L1ME3A LINE L1 -2097 4049 3823 294 29 0 0 chr5 187761078 187761113 -11869037 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1821 130 0 7 chr5 187761117 187761394 -11868756 - AluSx SINE Alu -37 275 1 813 264 133 79 chr5 187761394 187761991 -11868159 - L1ME3A LINE L1 -2325 3821 3136 1687 157 26 26 chr5 187761991 187762296 -11867854 - AluJo SINE Alu -7 305 1 813 264 133 79 chr5 187762296 187762503 -11867647 - L1ME3A LINE L1 -3010 3136 2942 846 121 0 0 chr5 187762515 187762639 -11867511 - AluSg/x SINE Alu -16 294 171 180 0 0 0 chr5 187762647 187762667 -11867483 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2044 118 0 0 chr5 187762678 187762966 -11867184 - AluSx SINE Alu -24 288 1 2223 210 73 50 chr5 187763480 187764021 -11866129 - L1ME1 LINE L1 -4 6973 6413 2427 58 0 0 chr5 187764021 187764315 -11865835 - AluY SINE Alu -17 294 1 2223 210 73 50 chr5 187764315 187764434 -11865716 - L1ME1 LINE L1 -564 6413 6298 321 82 0 0 chr5 187764441 187764490 -11865660 + (TA)n Simple_repeat Simple_repeat 1 49 0 454 160 0 0 chr5 187764490 187764565 -11865585 - AluJb SINE Alu -14 298 224 915 125 0 56 chr5 187764565 187764621 -11865529 - AluJb SINE Alu -161 151 93 2466 127 11 19 chr5 187764621 187764999 -11865151 - THE1C LTR MaLR 0 375 1 915 125 0 56 chr5 187764999 187765102 -11865048 - AluJb SINE Alu -219 93 1 6404 199 68 139 chr5 187765102 187765562 -11864588 - L1ME1 LINE L1 -847 6110 5619 1666 158 0 20 chr5 187765562 187765854 -11864296 + AluJb SINE Alu 6 291 -21 6404 199 68 139 chr5 187765854 187765946 -11864204 - L1ME1 LINE L1 -1338 5619 5522 2422 131 97 0 chr5 187765946 187766336 -11863814 + MSTA LTR MaLR 1 428 0 6404 199 68 139 chr5 187766336 187766773 -11863377 - L1ME1 LINE L1 -1435 5522 5055 1950 113 7 26 chr5 187766773 187767075 -11863075 - AluSx SINE Alu -16 296 1 6404 199 68 139 chr5 187767075 187767418 -11862732 - L1ME1 LINE L1 -1902 5055 4689 1640 187 23 0 chr5 187767418 187767723 -11862427 - AluJo SINE Alu 0 312 1 6404 199 68 139 chr5 187767723 187767815 -11862335 - L1ME1 LINE L1 -2268 4689 4592 2108 117 3 0 chr5 187767815 187768113 -11862037 - AluSx SINE Alu -13 299 1 6404 199 68 139 chr5 187768113 187768467 -11861683 - L1ME1 LINE L1 -2365 4592 4214 1121 113 98 34 chr5 187768467 187768559 -11861591 - Tigger1 DNA MER2_type 0 2418 2333 353 96 0 0 chr5 187768559 187768611 -11861539 + L1PA7 LINE L1 6103 6154 0 1121 113 98 34 chr5 187768611 187768722 -11861428 - Tigger1 DNA MER2_type -85 2333 2202 648 138 269 28 chr5 187768692 187768837 -11861313 - Tigger1 DNA MER2_type -2238 180 1 * 6404 199 68 139 chr5 187768837 187770015 -11860135 - L1ME1 LINE L1 -2858 4099 3075 369 0 0 0 chr5 187770015 187770056 -11860094 + (CA)n Simple_repeat Simple_repeat 2 42 0 443 281 8 46 chr5 187770057 187770322 -11859828 + L1M4c LINE L1 1317 1721 -4842 353 175 15 55 chr5 187770343 187770494 -11859656 - L1ME1 LINE L1 -3933 3024 2928 1210 130 76 18 chr5 187770612 187770835 -11859315 + L1M4c LINE L1 311 546 -5838 373 265 122 22 chr5 187770845 187771026 -11859124 - L1ME1 LINE L1 -5330 1808 1610 * 8677 126 61 46 chr5 187771014 187772605 -11857545 - L1M4c LINE L1 -4766 1618 4 386 292 110 59 chr5 187772608 187772915 -11857235 - L1ME1 LINE L1 -5204 1810 1472 216 0 0 0 chr5 187773116 187773140 -11857010 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 357 125 0 0 chr5 187773179 187773235 -11856915 + (TCCC)n Simple_repeat Simple_repeat 3 58 0 2094 114 0 3 chr5 187773235 187773532 -11856618 - AluSp SINE Alu -17 296 1 254 362 116 14 chr5 187774285 187774561 -11855589 + L2 LINE L2 2600 2903 -411 354 61 0 0 chr5 187774619 187774668 -11855482 + (CA)n Simple_repeat Simple_repeat 1 49 0 444 308 23 8 chr5 187774794 187774924 -11855226 + L2 LINE L2 3178 3309 -4 700 302 15 19 chr5 187775089 187775294 -11854856 - MIR SINE MIR -50 212 9 573 196 98 14 chr5 187776022 187776165 -11853985 + MIR3 SINE MIR 33 187 -21 194 370 89 8 chr5 187776673 187776908 -11853242 + L2 LINE L2 2245 2498 -816 230 265 144 19 chr5 187777216 187777304 -11852846 - L1MB8 LINE L1 -208 5970 5894 1698 251 90 16 chr5 187777304 187777815 -11852335 + MLT1H LTR MaLR 1 549 0 230 265 144 19 chr5 187777815 187777996 -11852154 - L1MB8 LINE L1 -284 5894 5664 313 330 46 46 chr5 187778036 187778209 -11851941 + L2 LINE L2 2660 2832 -482 513 268 112 0 chr5 187778234 187778413 -11851737 + MIR SINE MIR 64 262 0 346 301 140 43 chr5 187778474 187778796 -11851354 + L2 LINE L2 2920 3272 0 261 189 274 9 chr5 187778832 187778938 -11851212 - L2 LINE L2 -2 3270 3137 284 239 39 77 chr5 187779147 187779277 -11850873 + L2 LINE L2 3146 3270 -2 183 274 316 0 chr5 187779306 187779423 -11850727 + MIR3 SINE MIR 45 198 -10 489 233 49 164 chr5 187779542 187779829 -11850321 - MIR SINE MIR -1 261 8 478 144 10 10 chr5 187780429 187780526 -11849624 + GA-rich Low_complexity Low_complexity 4 100 0 317 242 118 26 chr5 187781302 187781495 -11848655 + MIR SINE MIR 18 222 -40 294 264 48 130 chr5 187781637 187781845 -11848305 + MIR SINE MIR 37 227 -35 180 0 0 0 chr5 187782670 187782690 -11847460 + (TG)n Simple_repeat Simple_repeat 2 21 0 2415 109 0 0 chr5 187783143 187783454 -11846696 + AluSx SINE Alu 1 311 -1 354 348 30 24 chr5 187783454 187783618 -11846532 - MIR SINE MIR -24 238 74 369 258 204 50 chr5 187783991 187784212 -11845938 + MIR SINE MIR 3 257 -5 1073 301 161 20 chr5 187784478 187784980 -11845170 - MLT1K LTR MaLR -4 584 12 468 296 61 0 chr5 187785010 187785142 -11845008 - MIR SINE MIR -73 189 50 670 23 23 0 chr5 187785990 187786078 -11844072 + (TAGA)n Simple_repeat Simple_repeat 4 93 0 535 331 7 0 chr5 187786089 187786225 -11843925 + L2 LINE L2 3136 3272 0 226 214 0 0 chr5 187786228 187786270 -11843880 + (TGAG)n Simple_repeat Simple_repeat 1 42 0 385 243 237 13 chr5 187786295 187786481 -11843669 + MIR SINE MIR 29 254 -8 210 244 0 0 chr5 187786720 187786765 -11843385 + (TG)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr5 187788283 187788305 -11841845 + AT_rich Low_complexity Low_complexity 1 22 0 180 250 33 17 chr5 187788734 187788794 -11841356 + MIR3 SINE MIR 8 68 -140 465 308 95 59 chr5 187789053 187789366 -11840784 - L2 LINE L2 -2 3311 2978 1987 155 0 23 chr5 187789366 187789676 -11840474 + AluJo SINE Alu 1 303 -9 465 308 95 59 chr5 187789676 187789784 -11840366 - L2 LINE L2 -335 2978 2875 229 269 13 0 chr5 187789832 187789910 -11840240 + (TTCA)n Simple_repeat Simple_repeat 2 80 0 272 275 25 0 chr5 187789913 187789993 -11840157 - L2 LINE L2 -3 3310 3229 281 204 29 33 chr5 187790693 187790783 -11839367 - MIR SINE MIR -117 91 3 362 115 16 0 chr5 187792081 187792142 -11838008 + (TCCA)n Simple_repeat Simple_repeat 2 63 0 427 208 20 0 chr5 187792170 187792271 -11837879 - L1MC/D LINE L1 -2023 5785 5683 188 244 24 0 chr5 187792279 187792320 -11837830 - L2 LINE L2 -15 3298 3257 21 0 0 0 chr5 187792333 187792354 -11837796 + AT_rich Low_complexity Low_complexity 1 21 0 189 307 50 50 chr5 187792759 187792899 -11837251 + L2 LINE L2 2839 2978 -294 392 203 0 14 chr5 187793050 187793124 -11837026 + MER117 DNA MER1_type 1 73 -124 1239 202 55 3 chr5 187793130 187793492 -11836658 - Charlie5 DNA MER1_type 0 2624 2244 2140 110 0 14 chr5 187793507 187793823 -11836327 - AluSx SINE Alu 0 312 1 531 175 70 0 chr5 187793825 187793939 -11836211 - MER3 DNA MER1_type -84 125 51 495 66 0 0 chr5 187794303 187794364 -11835786 + AluSp SINE Alu 2 62 -248 1746 72 0 0 chr5 187794364 187794572 -11835578 + AluSp SINE Alu 97 304 -9 330 290 259 0 chr5 187795181 187795312 -11834838 + MIR SINE MIR 3 167 -95 522 254 26 69 chr5 187795714 187795903 -11834247 + MER5A DNA MER1_type 9 189 0 258 334 61 2 chr5 187796246 187796424 -11833726 + L1M1 LINE L1 5625 5812 -352 353 222 71 63 chr5 187796650 187796776 -11833374 + L1MC5 LINE L1 7804 7930 -31 2360 48 41 7 chr5 187796822 187797114 -11833036 + AluY SINE Alu 1 302 -9 281 322 43 17 chr5 187797748 187797863 -11832287 + MIR SINE MIR 29 146 -62 1113 247 49 38 chr5 187798964 187799329 -11830821 + L1ME3 LINE L1 5793 6161 -1 576 308 119 43 chr5 187799337 187799900 -11830250 + L2 LINE L2 2688 3286 -27 463 275 35 14 chr5 187800080 187800222 -11829928 + MLT1K LTR MaLR 396 540 -48 765 217 0 0 chr5 187800461 187800641 -11829509 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 281 294 8 0 chr5 187800661 187800787 -11829363 + (TGGA)n Simple_repeat Simple_repeat 3 129 0 * 577 229 6 17 chr5 187800767 187800946 -11829204 + (TGGG)n Simple_repeat Simple_repeat 3 179 0 364 246 160 8 chr5 187801117 187801287 -11828863 - MIR3 SINE MIR -73 135 3 311 300 152 42 chr5 187801878 187802115 -11828035 + L2 LINE L2 2921 3183 -89 441 264 91 0 chr5 187802642 187802771 -11827379 + MIR SINE MIR 104 245 -17 186 43 0 0 chr5 187803031 187803054 -11827096 + (GA)n Simple_repeat Simple_repeat 1 23 0 662 61 20 0 chr5 187803756 187803854 -11826296 - HSMAR2 DNA Mariner -1 1301 1202 1124 134 0 82 chr5 187803865 187804059 -11826091 - FRAM SINE Alu 0 176 1 3956 119 3 4 chr5 187804060 187804808 -11825342 - HSMAR2 DNA Mariner -90 1212 406 1244 96 0 50 chr5 187804806 187805004 -11825146 - Tigger2a DNA MER2_type -246 188 1 * 2341 104 0 13 chr5 187805071 187805379 -11824771 - AluSx SINE Alu -8 304 1 461 262 20 7 chr5 187805650 187805799 -11824351 - L1ME3A LINE L1 -281 5889 5739 704 293 96 3 chr5 187805812 187806147 -11824003 - L1ME3A LINE L1 -512 5658 5293 * 1354 193 46 76 chr5 187806127 187806344 -11823806 - L1M4 LINE L1 -2833 3313 3091 1783 179 3 35 chr5 187806344 187806657 -11823493 - AluJb SINE Alu -9 303 1 1354 193 46 76 chr5 187806657 187806817 -11823333 - L1M4 LINE L1 -3055 3091 2928 2417 95 3 0 chr5 187806817 187807121 -11823029 - AluSp SINE Alu -8 305 1 1354 193 46 76 chr5 187807121 187807311 -11822839 - L1M4 LINE L1 -3218 2928 2762 * 3941 233 68 37 chr5 187807306 187808463 -11821687 - L1MC4a LINE L1 0 7808 6605 266 50 25 0 chr5 187808463 187808503 -11821647 + (CA)n Simple_repeat Simple_repeat 2 42 0 3941 233 68 37 chr5 187808503 187808642 -11821508 - L1MC4a LINE L1 -1203 6605 6472 386 292 85 31 chr5 187808755 187809299 -11820851 - L1ME3A LINE L1 -2841 3305 2733 289 294 22 68 chr5 187809449 187809861 -11820289 - L1ME3A LINE L1 -3622 2524 2132 230 223 107 9 chr5 187809993 187810105 -11820045 - L1M4 LINE L1 -833 5313 5191 302 160 0 0 chr5 187810109 187810159 -11819991 - MER66A LTR ERV1 -139 339 290 535 314 45 73 chr5 187811004 187811291 -11818859 + L2 LINE L2 2994 3272 0 260 253 76 25 chr5 187811404 187811483 -11818667 + MIR SINE MIR 168 250 -12 542 248 154 57 chr5 187811919 187812191 -11817959 + L2 LINE L2 2714 2958 -355 2198 142 3 0 chr5 187812191 187812500 -11817650 - AluSx SINE Alu -2 310 1 542 248 154 57 chr5 187812500 187812721 -11817429 + L2 LINE L2 2958 3303 -10 217 368 29 29 chr5 187813278 187813414 -11816736 + MIR3 SINE MIR 1 136 -72 445 288 158 11 chr5 187814132 187814309 -11815841 - MIR SINE MIR -11 251 49 343 205 27 98 chr5 187815104 187815135 -11815015 - MIR SINE MIR -79 183 151 2320 111 0 0 chr5 187815135 187815432 -11814718 - AluSx SINE Alu -15 297 1 343 205 27 98 chr5 187815432 187815512 -11814638 - MIR SINE MIR -111 151 80 1797 196 102 9 chr5 187815599 187816022 -11814128 + MLT1C LTR MaLR 6 467 0 438 316 40 34 chr5 187816028 187816205 -11813945 - MIR SINE MIR -73 189 12 309 325 45 26 chr5 187816208 187816362 -11813788 - MER5B DNA MER1_type -4 174 18 243 385 0 8 chr5 187816735 187816857 -11813293 - MIR SINE MIR -55 153 33 191 301 8 57 chr5 187817057 187817180 -11812970 - MIR SINE MIR -119 143 27 375 354 69 0 chr5 187818429 187818604 -11811546 + MIR SINE MIR 33 219 -43 1098 166 184 15 chr5 187818799 187819193 -11810957 + MER31A LTR ERV1 1 543 0 200 203 0 68 chr5 187820290 187820349 -11809801 + C-rich Low_complexity Low_complexity 5 59 0 380 187 13 13 chr5 187820468 187820543 -11809607 - MIR SINE MIR -70 192 118 301 331 109 11 chr5 187820850 187821025 -11809125 - MIR SINE MIR -15 247 56 198 345 149 0 chr5 187821559 187821646 -11808504 + MIR SINE MIR 23 122 -86 261 244 0 0 chr5 187822078 187822164 -11807986 + (CCA)n Simple_repeat Simple_repeat 1 86 0 2048 120 20 3 chr5 187822275 187822567 -11807583 + AluSx SINE Alu 1 297 -15 1273 258 19 4 chr5 187822589 187823019 -11807131 - LTR16C LTR ERVL 0 491 2 281 307 17 0 chr5 187823091 187823330 -11806820 + (TGGA)n Simple_repeat Simple_repeat 1 243 0 229 313 0 0 chr5 187824492 187824559 -11805591 + (TG)n Simple_repeat Simple_repeat 2 68 0 317 333 122 57 chr5 187824646 187825048 -11805102 + L2 LINE L2 2845 3272 0 840 135 0 0 chr5 187825052 187825200 -11804950 + (TGGA)n Simple_repeat Simple_repeat 3 150 0 273 232 56 80 chr5 187826236 187826361 -11803789 + MIR3 SINE MIR 3 124 -84 373 320 80 27 chr5 187826743 187826968 -11803182 - MIR SINE MIR -12 250 14 318 233 67 0 chr5 187828222 187828312 -11801838 - L1ME LINE L1 -297 5824 5729 380 296 111 40 chr5 187828350 187828576 -11801574 - L1ME LINE L1 -477 5644 5403 297 163 0 0 chr5 187828591 187828640 -11801510 - L2 LINE L2 0 3313 3265 2192 103 7 7 chr5 187829271 187829561 -11800589 - AluSc SINE Alu -19 290 1 209 289 58 66 chr5 187829626 187829747 -11800403 - MIR SINE MIR -123 139 20 234 317 75 21 chr5 187830172 187830358 -11799792 + L2 LINE L2 2469 2664 -650 224 229 37 9 chr5 187830884 187830961 -11799189 - MIR SINE MIR -71 191 113 272 284 78 43 chr5 187831184 187831300 -11798850 - MIR SINE MIR -59 149 30 207 211 0 39 chr5 187831460 187831512 -11798638 + L2 LINE L2 3264 3313 0 326 343 28 0 chr5 187831583 187831691 -11798459 - MIR SINE MIR -82 180 70 293 300 108 8 chr5 187832276 187832396 -11797754 + MIR SINE MIR 20 151 -111 1377 167 0 0 chr5 187833381 187833591 -11796559 + AluSg/x SINE Alu 94 303 -9 274 118 0 39 chr5 187833635 187833686 -11796464 - L1MC/D LINE L1 -2030 5778 5730 670 263 6 0 chr5 187833712 187833868 -11796282 - L1MD1 LINE L1 -8 6234 6078 * 776 232 55 32 chr5 187833865 187834072 -11796078 - L1MD2 LINE L1 -213 6146 5932 260 53 26 0 chr5 187834072 187834110 -11796040 + (TA)n Simple_repeat Simple_repeat 2 40 0 776 232 55 32 chr5 187834110 187834122 -11796028 - L1MD2 LINE L1 -427 5932 5922 1048 204 26 15 chr5 187834232 187834497 -11795653 + MER33 DNA MER1_type 35 302 -22 206 299 238 14 chr5 187834685 187834832 -11795318 + MIR SINE MIR 6 185 -77 1864 123 4 0 chr5 187834942 187835211 -11794939 - AluSx SINE Alu -42 270 1 575 277 65 0 chr5 187835238 187835393 -11794757 + MIR SINE MIR 42 206 -56 997 275 77 21 chr5 187835792 187836119 -11794031 + LTR16C LTR ERVL 67 411 -80 422 276 158 27 chr5 187836373 187836594 -11793556 + MLT1L LTR MaLR 269 524 -70 566 228 59 7 chr5 187836974 187837110 -11793040 - MIR SINE MIR -101 161 19 836 68 0 8 chr5 187837841 187837958 -11792192 + (TTTCC)n Simple_repeat Simple_repeat 3 118 0 2041 135 3 0 chr5 187837958 187838255 -11791895 - AluSx SINE Alu -14 298 1 779 177 49 75 chr5 187838469 187838695 -11791455 + MLT1D LTR MaLR 1 220 -285 285 279 39 10 chr5 187838853 187838957 -11791193 + MIR SINE MIR 81 187 -75 751 255 115 68 chr5 187838972 187839294 -11790856 + MER102b DNA MER1_type 1 337 -4 642 283 23 0 chr5 187839792 187839969 -11790181 + MIR SINE MIR 51 231 -31 323 308 39 13 chr5 187840402 187840558 -11789592 - MER20B DNA MER1_type -596 187 28 366 352 28 23 chr5 187840610 187840786 -11789364 + MIR SINE MIR 74 250 -12 817 266 19 30 chr5 187841649 187841912 -11788238 + MIR SINE MIR 2 261 -1 231 376 32 0 chr5 187841954 187842047 -11788103 - MIR SINE MIR -77 131 36 183 270 117 63 chr5 187842991 187843102 -11787048 + MIR SINE MIR 132 248 -14 264 135 77 0 chr5 187843317 187843369 -11786781 + L2 LINE L2 3173 3228 -85 343 254 76 0 chr5 187843554 187843664 -11786486 - MIR SINE MIR -61 147 41 207 345 214 18 chr5 187843668 187843836 -11786314 - L2 LINE L2 0 3272 3072 356 282 79 22 chr5 187843880 187844107 -11786043 - L2 LINE L2 -527 2787 2548 477 274 63 104 chr5 187844378 187844790 -11785360 - MLT1I LTR MaLR -14 395 1 242 216 59 0 chr5 187844876 187844927 -11785223 - MIR SINE MIR -109 153 100 330 321 75 25 chr5 187845052 187845172 -11784978 + MIR SINE MIR 43 167 -65 311 200 17 96 chr5 187845370 187845485 -11784665 + MIR SINE MIR 39 144 -118 324 48 0 0 chr5 187845700 187845742 -11784408 + (TG)n Simple_repeat Simple_repeat 2 43 0 337 296 3 43 chr5 187846086 187846338 -11783812 + GA-rich Low_complexity Low_complexity 1 241 0 237 310 86 9 chr5 187846717 187846833 -11783317 + MIR SINE MIR 28 152 -110 351 307 73 7 chr5 187846895 187847045 -11783105 + Charlie8 DNA MER1_type 1 160 -2257 319 305 116 60 chr5 187847753 187848071 -11782079 - L2 LINE L2 -100 3172 2837 352 295 31 8 chr5 187848154 187848283 -11781867 - L2 LINE L2 -557 2757 2626 208 221 29 59 chr5 187848459 187848527 -11781623 - L2 LINE L2 0 3272 3207 1287 186 14 0 chr5 187848798 187849019 -11781131 - MER58A DNA MER1_type 0 224 1 965 259 107 8 chr5 187849057 187849450 -11780700 - LTR33 LTR ERVL 0 521 90 203 280 0 86 chr5 187849523 187849616 -11780534 - MIR SINE MIR -111 97 13 402 260 39 24 chr5 187849702 187849829 -11780321 + MIR SINE MIR 18 146 -62 344 315 39 11 chr5 187849849 187850030 -11780120 + MER5A DNA MER1_type 1 186 -3 279 337 111 24 chr5 187850093 187850304 -11779846 - MIR SINE MIR -8 254 20 511 247 132 6 chr5 187851007 187851181 -11778969 + MER117 DNA MER1_type 2 197 0 605 224 6 67 chr5 187851464 187851629 -11778521 + L2 LINE L2 3154 3308 -5 1667 129 0 95 chr5 187851823 187852149 -11778001 + AluSx SINE Alu 1 295 -17 1124 299 70 48 chr5 187853110 187853301 -11776849 - L1MEc LINE L1 -3462 2753 2568 1902 103 53 13 chr5 187853301 187853601 -11776549 - AluSx SINE Alu 0 312 1 1124 299 70 48 chr5 187853601 187854323 -11775827 - L1MEc LINE L1 -3647 2568 1863 1938 164 113 23 chr5 187854323 187854646 -11775504 - Tigger2a DNA MER2_type -2274 434 67 2332 68 0 19 chr5 187854646 187854953 -11775197 - AluY SINE Alu -10 301 1 1938 164 113 23 chr5 187854953 187855026 -11775124 - Tigger2a DNA MER2_type -2641 67 2 1124 299 70 48 chr5 187855026 187855994 -11774156 - L1MEc LINE L1 -4352 1863 857 2025 135 0 0 chr5 187856008 187856304 -11773846 - AluSx SINE Alu -16 296 1 3564 38 2 0 chr5 187857174 187857643 -11772507 + L1PA4 LINE L1 5716 6185 0 4179 217 82 19 chr5 187857779 187858351 -11771799 - MER69B DNA AcHobo -1370 1156 621 279 0 0 0 chr5 187858351 187858382 -11771768 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4179 217 82 19 chr5 187858382 187858603 -11771547 - MER69B DNA AcHobo -1905 621 415 2143 90 36 0 chr5 187858603 187858904 -11771246 + AluSx SINE Alu 1 312 0 4179 217 82 19 chr5 187858904 187859188 -11770962 - MER69B DNA AcHobo -2111 415 10 354 304 9 4 chr5 187859190 187859299 -11770851 - MIR SINE MIR -72 136 44 24 32 0 0 chr5 187861326 187861357 -11768793 + AT_rich Low_complexity Low_complexity 1 31 0 22 56 0 0 chr5 187863012 187863048 -11767102 + AT_rich Low_complexity Low_complexity 1 36 0 540 277 8 94 chr5 187863098 187863354 -11766796 - MIR SINE MIR 0 262 29 2420 154 27 105 chr5 187863395 187863987 -11766163 - L1MC3 LINE L1 -8 7777 7232 2078 133 0 0 chr5 187864642 187864944 -11765206 - AluSx SINE Alu -10 302 1 6591 134 15 12 chr5 187864957 187866106 -11764044 - L1MC1 LINE L1 0 6333 5184 701 254 46 10 chr5 187866113 187866310 -11763840 + Charlie8 DNA MER1_type 61 264 -2153 336 221 15 0 chr5 187866352 187866420 -11763730 + Charlie8 DNA MER1_type 2340 2408 -9 577 292 92 18 chr5 187866490 187866725 -11763425 - MIR SINE MIR -3 259 10 1730 128 80 7 chr5 187867723 187868012 -11762138 - AluJb SINE Alu -2 310 1 275 245 0 0 chr5 187868036 187868089 -11762061 + L2 LINE L2 3261 3313 0 311 133 0 0 chr5 187868364 187868409 -11761741 + L2 LINE L2 3249 3293 -20 270 310 11 11 chr5 187868606 187868693 -11761457 - L2 LINE L2 0 3313 3227 273 289 26 0 chr5 187868734 187868810 -11761340 - L2 LINE L2 0 3272 3195 473 235 11 104 chr5 187868941 187869124 -11761026 + MIR SINE MIR 63 228 -34 356 297 130 51 chr5 187870021 187870314 -11759836 - MER102b DNA MER1_type 0 341 26 295 326 0 11 chr5 187870356 187870451 -11759699 + MIR SINE MIR 67 160 -102 238 281 43 115 chr5 187870510 187870649 -11759501 - MIR SINE MIR -10 252 124 858 232 217 32 chr5 187870936 187871410 -11758740 + L1ME4a LINE L1 5555 6116 -5 441 194 56 9 chr5 187871520 187871628 -11758522 + L1ME4a LINE L1 5974 6086 -35 197 291 63 63 chr5 187872627 187872706 -11757444 - MIR SINE MIR -76 186 108 416 261 111 39 chr5 187873323 187873476 -11756674 + MIR SINE MIR 82 245 -17 410 366 118 20 chr5 187873979 187874233 -11755917 + L1MC/D LINE L1 5309 5587 -2221 232 288 16 24 chr5 187874281 187874406 -11755744 + L1M4 LINE L1 4942 5065 -1081 474 221 39 0 chr5 187874406 187874510 -11755640 + MIR SINE MIR 65 172 -90 1229 237 109 19 chr5 187874552 187874923 -11755227 + MLT1J2 LTR MaLR 43 401 -8 838 250 42 41 chr5 187875526 187875879 -11754271 + MLT1L LTR MaLR 1 372 -216 981 258 59 78 chr5 187876714 187877262 -11752888 + LTR33A LTR ERVL 17 523 0 713 167 82 142 chr5 187877655 187877888 -11752262 - MER20 DNA MER1_type 0 219 1 309 267 10 50 chr5 187877896 187877997 -11752153 + Charlie8 DNA MER1_type 103 199 -2218 1524 263 45 13 chr5 187878028 187878404 -11751746 - MLT1E LTR MaLR 0 593 206 294 50 0 0 chr5 187878411 187878451 -11751699 + (GA)n Simple_repeat Simple_repeat 2 41 0 533 267 78 33 chr5 187878474 187878654 -11751496 - MLT1E LTR MaLR -344 198 11 1864 217 62 14 chr5 187878656 187879094 -11751056 - MLT1C LTR MaLR 0 467 9 1509 162 58 37 chr5 187879576 187879903 -11750247 + L1MD3 LINE L1 7660 7993 -2 378 0 0 0 chr5 187880304 187880346 -11749804 + (CA)n Simple_repeat Simple_repeat 2 43 0 457 277 31 44 chr5 187881087 187881246 -11748904 - MIR3 SINE MIR -18 190 34 289 365 29 0 chr5 187881532 187881669 -11748481 + MIR SINE MIR 50 190 -72 358 164 0 0 chr5 187882034 187882095 -11748055 + HsTC2 DNA Tc2 1838 1898 0 277 267 80 71 chr5 187882258 187882483 -11747667 - MLT1K LTR MaLR -163 425 199 759 236 118 0 chr5 187882844 187883039 -11747111 - MIR SINE MIR -2 260 43 461 295 0 8 chr5 187883270 187883399 -11746751 - MIR SINE MIR -118 144 17 438 263 0 42 chr5 187883864 187883982 -11746168 - MIR SINE MIR -133 129 17 184 309 25 25 chr5 187884009 187884090 -11746060 - L2 LINE L2 -66 3247 3167 1135 273 42 70 chr5 187884194 187884693 -11745457 - MLT1K LTR MaLR -20 568 84 230 342 77 13 chr5 187885066 187885221 -11744929 + MIR SINE MIR 98 262 0 183 186 0 0 chr5 187885938 187885981 -11744169 + A-rich Low_complexity Low_complexity 1 43 0 2240 93 0 3 chr5 187886729 187887042 -11743108 + AluSx SINE Alu 1 312 0 699 277 73 5 chr5 187887081 187887301 -11742849 - MIR SINE MIR -26 236 2 450 220 15 8 chr5 187887734 187887866 -11742284 + L2 LINE L2 2853 2985 -328 2038 76 0 4 chr5 187887878 187888142 -11742008 + AluSg SINE Alu 32 294 -16 190 171 0 29 chr5 187888591 187888626 -11741524 - MIR SINE MIR -139 69 36 288 281 113 19 chr5 187888661 187888821 -11741329 - L2 LINE L2 -270 3002 2828 385 257 109 46 chr5 187889692 187889867 -11740283 + MIR SINE MIR 33 218 -44 280 83 0 0 chr5 187889872 187889908 -11740242 + Alu SINE Alu 2 37 -263 254 309 0 0 chr5 187890138 187890206 -11739944 + MIR SINE MIR 86 153 -109 672 280 11 0 chr5 187890638 187890813 -11739337 - MER45A DNA AcHobo -1 177 1 326 146 0 0 chr5 187891510 187891565 -11738585 - MLT2D LTR ERVL -3 512 458 762 49 61 38 chr5 187891596 187892531 -11737619 + (TAGA)n Simple_repeat Simple_repeat 1 956 0 1663 205 27 21 chr5 187892561 187892592 -11737558 - MLT2D LTR ERVL -39 425 396 944 38 22 49 chr5 187892592 187892777 -11737373 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1663 205 27 21 chr5 187892777 187893132 -11737018 - MLT2D LTR ERVL -68 396 3 465 127 13 13 chr5 187893431 187893510 -11736640 - MER116 DNA Mariner 0 80 2 284 277 23 37 chr5 187893754 187893892 -11736258 + MIR SINE MIR 16 153 -55 184 238 0 0 chr5 187894117 187894159 -11735991 + L2 LINE L2 3221 3262 -10 602 242 99 47 chr5 187894176 187894387 -11735763 - MIR SINE MIR -27 235 14 295 220 170 20 chr5 187894687 187894787 -11735363 - MIR SINE MIR -63 145 31 837 180 60 44 chr5 187894929 187895112 -11735038 + MIR SINE MIR 53 238 -24 377 331 21 0 chr5 187895904 187896046 -11734104 - L2 LINE L2 -213 3059 2915 439 238 49 49 chr5 187896167 187896310 -11733840 - MIR3 SINE MIR -33 175 33 1533 139 20 4 chr5 187896329 187896574 -11733576 - AluSx SINE Alu -63 249 1 201 365 51 6 chr5 187896624 187896780 -11733370 - L2 LINE L2 -512 2802 2640 256 277 151 82 chr5 187896837 187897202 -11732948 + L2 LINE L2 2834 3223 -49 1069 116 12 0 chr5 187897654 187897915 -11732235 + (TGGA)n Simple_repeat Simple_repeat 1 264 0 445 252 47 64 chr5 187898427 187898659 -11731491 - MIR SINE MIR -6 256 30 257 118 20 0 chr5 187899019 187899070 -11731080 + T-rich Low_complexity Low_complexity 5 56 0 457 249 11 43 chr5 187899621 187899806 -11730344 + (TG)n Simple_repeat Simple_repeat 1 179 0 336 282 54 34 chr5 187900131 187900280 -11729870 + MIR SINE MIR 1 152 -110 242 305 212 8 chr5 187900391 187900509 -11729641 - MIR SINE MIR -92 170 29 193 164 164 55 chr5 187900544 187900599 -11729551 + MER5A DNA MER1_type 102 162 -27 305 235 44 0 chr5 187900898 187900966 -11729184 + L3 LINE CR1 1379 1449 -128 297 330 46 18 chr5 187901083 187901192 -11728958 - L2 LINE L2 -11 3302 3191 930 199 90 0 chr5 187901403 187901604 -11728546 - MER20 DNA MER1_type 0 219 1 258 81 0 0 chr5 187902971 187903008 -11727142 + (CA)n Simple_repeat Simple_repeat 2 38 0 340 136 0 58 chr5 187903586 187903689 -11726461 + (TTCC)n Simple_repeat Simple_repeat 1 97 0 259 261 182 19 chr5 187904831 187904984 -11725166 + MIR SINE MIR 17 183 -69 1547 264 57 16 chr5 187905685 187906110 -11724040 + MLT1K LTR MaLR 134 575 -13 420 348 78 45 chr5 187906117 187906632 -11723518 + L2 LINE L2 1019 1550 -1764 218 242 19 42 chr5 187906645 187906749 -11723401 + MIR SINE MIR 29 98 -110 303 273 15 0 chr5 187907269 187907335 -11722815 + MIR SINE MIR 79 145 -63 702 181 208 0 chr5 187907834 187907978 -11722172 + MER96 DNA MER1_type 2 175 0 441 250 28 0 chr5 187908089 187908197 -11721953 - Charlie8 DNA MER1_type -2191 226 116 1124 115 17 0 chr5 187908204 187908378 -11721772 + L1MA8 LINE L1 6113 6289 -2 1011 149 102 68 chr5 187909145 187909440 -11720710 - MER33 DNA MER1_type 0 324 20 199 335 161 0 chr5 187909485 187909640 -11720510 + MIR SINE MIR 74 253 -9 811 180 0 0 chr5 187909799 187909927 -11720223 + FLAM_A SINE Alu 1 128 -5 441 200 0 0 chr5 187910062 187910137 -11720013 - FLAM_A SINE Alu -67 75 1 507 271 65 92 chr5 187910456 187910960 -11719190 - L1ME4a LINE L1 -18 6103 5721 2416 81 0 0 chr5 187910961 187911269 -11718881 - AluY SINE Alu -3 308 1 1240 206 17 131 chr5 187911350 187911762 -11718388 + MLT1A1 LTR MaLR 1 365 0 463 346 100 16 chr5 187912055 187912795 -11717355 - L2 LINE L2 -5 3308 2439 377 215 83 16 chr5 187912997 187913118 -11717032 - MER103 DNA DNA -1 165 37 315 71 0 0 chr5 187913298 187913340 -11716810 + (CA)n Simple_repeat Simple_repeat 2 43 0 1533 202 17 7 chr5 187913404 187913696 -11716454 - MER66B LTR ERV1 -191 295 1 412 310 134 41 chr5 187913849 187914487 -11715663 + L2 LINE L2 2614 3309 -4 1246 240 31 44 chr5 187914575 187914958 -11715192 - MLT2C1 LTR ERVL -19 378 1 268 193 24 72 chr5 187915056 187915084 -11715066 + MIR SINE MIR 66 94 -168 1595 197 73 28 chr5 187915084 187915511 -11714639 + MLT1J1 LTR MaLR 1 446 0 268 193 24 72 chr5 187915511 187915565 -11714585 + MIR SINE MIR 94 144 -118 1092 326 86 7 chr5 187915634 187916051 -11714099 - MLT1J LTR MaLR -58 453 4 427 317 32 8 chr5 187916575 187916698 -11713452 - MIR SINE MIR -62 146 21 452 276 119 5 chr5 187916755 187916940 -11713210 + MLT1K LTR MaLR 26 231 -357 343 317 40 10 chr5 187917596 187917697 -11712453 - L2 LINE L2 -21 3251 3148 471 286 88 18 chr5 187917944 187918161 -11711989 - LTR33 LTR ERVL 0 521 290 234 331 60 15 chr5 187918196 187918329 -11711821 + L2 LINE L2 2222 2360 -954 3197 218 59 25 chr5 187918551 187919676 -11710474 + L1ME2 LINE L1 5013 6334 0 575 237 63 147 chr5 187920101 187920578 -11709572 + MLT1J LTR MaLR 30 466 -45 187 250 29 73 chr5 187920653 187920721 -11709429 - L3 LINE CR1 -395 1182 1118 213 39 0 0 chr5 187920938 187920964 -11709186 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 1868 94 0 4 chr5 187920972 187921227 -11708923 - AluSg1 SINE Alu -55 254 1 362 204 106 153 chr5 187921817 187922052 -11708098 + LTR67 LTR ERVL 2 225 -332 283 279 93 47 chr5 187922219 187922348 -11707802 - MIR3 SINE MIR -59 149 15 370 249 30 107 chr5 187922590 187922787 -11707363 - MLT1H LTR MaLR -8 541 360 381 277 87 60 chr5 187923426 187923610 -11706540 - MIR SINE MIR -18 244 56 1582 156 0 69 chr5 187924071 187924404 -11705746 - AluJb SINE Alu -2 310 1 393 189 153 18 chr5 187924808 187924919 -11705231 - MLT1K LTR MaLR -16 572 447 1958 73 25 22 chr5 187925378 187925652 -11704498 - AluSg SINE Alu -32 278 4 232 281 56 0 chr5 187925672 187925761 -11704389 + HsTC2 DNA Tc2 1801 1894 -4 440 254 52 8 chr5 187925855 187925989 -11704161 - MIR SINE MIR -1 261 122 434 251 162 5 chr5 187927352 187927550 -11702600 - MIR SINE MIR -33 229 6 201 344 0 56 chr5 187927637 187927727 -11702423 + L2 LINE L2 3115 3199 -73 477 340 76 18 chr5 187927842 187928171 -11701979 + MLT1L LTR MaLR 148 495 -120 456 242 114 27 chr5 187928171 187928320 -11701830 - L2 LINE L2 0 3313 3152 6087 265 99 27 chr5 187928366 187928910 -11701240 + L1ME2 LINE L1 46 549 -5531 2226 93 0 0 chr5 187928910 187929201 -11700949 + AluY SINE Alu 1 291 -20 6087 265 99 27 chr5 187929201 187932817 -11697333 + L1ME2 LINE L1 549 4554 -1526 1116 155 72 10 chr5 187932840 187933034 -11697116 - MLT1A1 LTR MaLR -159 206 1 488 207 89 84 chr5 187933036 187933239 -11696911 + L1ME2 LINE L1 4711 4914 -1166 2324 203 22 88 chr5 187933239 187933959 -11696191 + L1ME2 LINE L1 5145 5818 -280 2146 235 73 45 chr5 187933938 187934510 -11695640 + L1MC4 LINE L1 7255 7810 -166 * 192 77 0 0 chr5 187934510 187934536 -11695614 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 2146 235 73 45 chr5 187934536 187934597 -11695553 + L1MC4 LINE L1 7810 7868 -108 197 33 33 0 chr5 187934597 187934627 -11695523 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2240 61 92 0 chr5 187934627 187934922 -11695228 - L1PA6 LINE L1 -12 6142 5821 2146 235 73 45 chr5 187934922 187934975 -11695175 + L1MC4 LINE L1 7867 7962 -14 1914 126 0 3 chr5 187934987 187935273 -11694877 + AluJb SINE Alu 12 296 -16 519 123 0 0 chr5 187935792 187935865 -11694285 + AluJ/FRAM SINE Alu 216 288 -24 371 335 142 28 chr5 187935900 187936252 -11693898 - MLT1K LTR MaLR -7 581 190 1724 252 41 37 chr5 187936428 187936963 -11693187 + MLT1H LTR MaLR 1 537 -12 2270 105 0 3 chr5 187937130 187937443 -11692707 + AluSq SINE Alu 1 312 -1 1924 131 10 16 chr5 187938259 187938571 -11691579 + AluJo SINE Alu 1 310 -2 638 310 75 9 chr5 187939188 187939414 -11690736 + MIR SINE MIR 21 261 -1 290 167 0 37 chr5 187940056 187940110 -11690040 + MIR SINE MIR 70 122 -86 457 321 32 61 chr5 187941167 187941444 -11688706 - L2 LINE L2 0 3313 3045 266 326 50 27 chr5 187941461 187941682 -11688468 + L2 LINE L2 2873 3098 -174 224 333 65 0 chr5 187942511 187942604 -11687546 - L2 LINE L2 -26 3246 3148 421 296 70 57 chr5 187942617 187942726 -11687424 - MIR SINE MIR -2 260 154 2697 97 92 0 chr5 187942726 187943118 -11687032 - MSTC LTR MaLR 0 428 1 421 296 70 57 chr5 187943118 187943238 -11686912 - MIR SINE MIR -108 154 28 439 319 0 33 chr5 187943382 187943564 -11686586 - MIR SINE MIR -59 203 28 2094 108 0 0 chr5 187943855 187944134 -11686016 + AluSx SINE Alu 1 279 -33 423 0 0 0 chr5 187944134 187944181 -11685969 + (CA)n Simple_repeat Simple_repeat 1 47 0 341 333 8 0 chr5 187944406 187944526 -11685624 - MIR SINE MIR -70 192 72 * 436 275 147 61 chr5 187944516 187944635 -11685515 + L2 LINE L2 2697 2804 -468 2100 112 0 3 chr5 187944635 187944929 -11685221 - AluSx SINE Alu -19 293 1 436 275 147 61 chr5 187944929 187945155 -11684995 + L2 LINE L2 2804 3080 -192 507 256 142 88 chr5 187946179 187946453 -11683697 - MLT1K LTR MaLR -285 303 15 663 292 16 16 chr5 187946712 187946897 -11683253 + MIR SINE MIR 46 230 -32 615 71 0 0 chr5 187946911 187946996 -11683154 + (ATG)n Simple_repeat Simple_repeat 1 85 0 220 187 67 40 chr5 187947060 187947135 -11683015 - L3 LINE CR1 -3 1574 1498 * 232 261 140 51 chr5 187947117 187947274 -11682876 - MIR SINE MIR -77 185 15 291 167 0 83 chr5 187948053 187948113 -11682037 + MLT1L LTR MaLR 1 55 -560 1004 286 32 0 chr5 187948271 187948554 -11681596 + MLT1L LTR MaLR 322 613 -2 237 266 0 38 chr5 187948641 187948720 -11681430 + MLT1K LTR MaLR 187 262 -326 813 235 88 13 chr5 187949114 187949352 -11680798 - MIR SINE MIR -4 258 3 322 281 26 53 chr5 187949477 187949591 -11680559 - L2 LINE L2 -196 3076 2966 2165 163 11 3 chr5 187949591 187949941 -11680209 - MLT1A1 LTR MaLR 0 365 13 798 266 50 37 chr5 187949958 187950428 -11679722 - LTR67 LTR ERVL -2 555 2 789 223 114 10 chr5 187951801 187951994 -11678156 + MER20 DNA MER1_type 4 216 -3 278 288 75 12 chr5 187952956 187953116 -11677034 + L2 LINE L2 2909 3078 -194 269 225 42 28 chr5 187953406 187953477 -11676673 + LTR67 LTR ERVL 101 172 -385 * 501 249 226 33 chr5 187953449 187953750 -11676400 + MLT1L LTR MaLR 203 561 -54 697 250 27 23 chr5 187953752 187953972 -11676178 - MER112 DNA MER1_type -8 252 32 407 340 80 0 chr5 187954617 187954767 -11675383 + L2 LINE L2 3109 3270 -2 1713 21 0 0 chr5 187954836 187955027 -11675123 + L1P2 LINE L1 5577 5767 -387 22 0 0 0 chr5 187955031 187955053 -11675097 + AT_rich Low_complexity Low_complexity 1 22 0 413 244 49 34 chr5 187955053 187955258 -11674892 + L1M4 LINE L1 2271 2478 -3668 2605 41 136 0 chr5 187955263 187955602 -11674548 + L1PA5 LINE L1 5770 6154 0 580 245 56 0 chr5 187956324 187956467 -11673683 + L1ME3 LINE L1 6012 6162 0 296 191 0 0 chr5 187956557 187956604 -11673546 - L2 LINE L2 -13 3259 3213 1967 152 10 0 chr5 187956732 187957041 -11673109 - AluSx SINE Alu 0 312 1 299 211 42 28 chr5 187957372 187957443 -11672707 + LTR67 LTR ERVL 101 172 -385 * 332 235 41 20 chr5 187957385 187957483 -11672667 + MLT1J LTR MaLR 110 209 -302 895 196 6 0 chr5 187957546 187957725 -11672425 + L1MB4 LINE L1 6000 6179 -1 354 235 55 80 chr5 187958595 187958795 -11671355 + L1M4 LINE L1 2289 2483 -3663 948 164 0 40 chr5 187958850 187959027 -11671123 + FRAM SINE Alu 1 168 -8 547 266 112 4 chr5 187959030 187959308 -11670842 + L1M4 LINE L1 2512 2819 -3327 595 297 61 13 chr5 187959334 187959563 -11670587 + L2 LINE L2 3073 3312 -1 1132 323 90 21 chr5 187959648 187960180 -11669970 - MLT1K LTR MaLR -3 585 17 573 276 45 50 chr5 187960839 187961060 -11669090 + MLT1K LTR MaLR 23 242 -346 234 241 0 0 chr5 187961936 187961990 -11668160 + L1M4 LINE L1 1043 1096 -5446 391 179 48 12 chr5 187962029 187962113 -11668037 + MLT1K LTR MaLR 502 588 0 1851 206 8 25 chr5 187962290 187962658 -11667492 - MLT1A1 LTR MaLR -3 362 1 338 202 64 101 chr5 187962719 187962946 -11667204 - MIR SINE MIR -50 212 33 266 333 0 0 chr5 187962967 187963063 -11667087 + MIR SINE MIR 41 136 -72 267 271 0 0 chr5 187964026 187964085 -11666065 + (CA)n Simple_repeat Simple_repeat 2 60 0 247 261 114 0 chr5 187965846 187965934 -11664216 + MIR SINE MIR 78 175 -87 492 353 52 7 chr5 187966476 187966765 -11663385 + LTR16C LTR ERVL 174 475 -16 474 291 51 117 chr5 187966824 187967354 -11662796 - L2 LINE L2 -92 3221 2700 285 255 142 14 chr5 187967346 187967487 -11662663 + MIR SINE MIR 100 258 -4 * 214 206 221 29 chr5 187967501 187967569 -11662581 + L2 LINE L2 3226 3306 -7 237 299 168 22 chr5 187967634 187967771 -11662379 + MIR SINE MIR 51 207 -55 565 314 46 33 chr5 187968814 187969203 -11660947 + HAL1b LINE L1 59 452 -896 376 270 122 0 chr5 187969205 187969353 -11660797 + HAL1b LINE L1 480 645 -703 2272 242 50 58 chr5 187969647 187970159 -11659991 + L1MC5 LINE L1 6476 6990 -971 2367 57 0 3 chr5 187970159 187970456 -11659694 - AluY SINE Alu -15 296 1 2272 242 50 58 chr5 187970456 187970997 -11659153 + L1MC5 LINE L1 6990 7528 -433 509 227 34 45 chr5 187971090 187971266 -11658884 + L1ME3A LINE L1 5963 6136 -34 2236 101 0 3 chr5 187971358 187971666 -11658484 - AluSx SINE Alu -5 307 1 276 269 29 67 chr5 187971717 187971821 -11658329 + L2 LINE L2 3190 3289 -24 406 289 163 44 chr5 187972007 187972419 -11657731 + L2 LINE L2 2770 3226 -46 406 235 20 92 chr5 187972436 187972474 -11657676 + MER110 LTR ERV1 328 367 -124 207 0 0 0 chr5 187972474 187972497 -11657653 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2614 20 0 0 chr5 187972497 187972793 -11657357 - L1PA2 LINE L1 -11 6144 5849 406 235 20 92 chr5 187972793 187972866 -11657284 + MER110 LTR ERV1 366 429 -62 2078 103 3 34 chr5 187972866 187973187 -11656963 + AluSq SINE Alu 1 311 -2 406 235 20 92 chr5 187973187 187973226 -11656924 + MER110 LTR ERV1 429 469 -22 264 200 0 20 chr5 187973242 187973292 -11656858 + L2 LINE L2 3251 3299 -14 288 0 0 0 chr5 187973583 187973615 -11656535 + (CA)n Simple_repeat Simple_repeat 2 33 0 511 299 22 27 chr5 187974902 187975149 -11655001 + MIR3 SINE MIR 1 248 -14 644 202 67 36 chr5 187975521 187975714 -11654436 - Charlie8 DNA MER1_type -2174 243 45 416 299 21 28 chr5 187976129 187976273 -11653877 - MIR SINE MIR -92 170 28 201 147 0 0 chr5 187976412 187976446 -11653704 + (CCCTA)n Simple_repeat Simple_repeat 2 35 0 485 340 6 0 chr5 187977450 187977606 -11652544 + MIR SINE MIR 92 248 -14 276 290 49 93 chr5 187977636 187977694 -11652456 - MIR SINE MIR -51 211 152 2248 86 7 0 chr5 187977694 187977996 -11652154 - AluSq SINE Alu -9 304 1 276 290 49 93 chr5 187977996 187978099 -11652051 - MIR SINE MIR -110 152 57 204 287 85 21 chr5 187979422 187979516 -11650634 - L2 LINE L2 -12 3260 3161 1306 232 99 64 chr5 187979773 187979903 -11650247 + MLT1D LTR MaLR 2 126 -379 2118 102 10 0 chr5 187979903 187980196 -11649954 + AluSx SINE Alu 1 296 -16 1306 232 99 64 chr5 187980196 187980273 -11649877 + MLT1D LTR MaLR 126 199 -306 414 0 0 0 chr5 187980273 187980319 -11649831 + (CA)n Simple_repeat Simple_repeat 1 46 0 1306 232 99 64 chr5 187980319 187980597 -11649553 + MLT1D LTR MaLR 199 505 0 771 199 103 103 chr5 187980946 187981227 -11648923 + MER102b DNA MER1_type 55 335 -6 401 206 10 0 chr5 187981616 187981713 -11648437 + GA-rich Low_complexity Low_complexity 3 100 0 427 266 133 23 chr5 187981733 187981906 -11648244 - MIR SINE MIR -32 230 39 737 323 22 0 chr5 187982693 187982925 -11647225 + MIR SINE MIR 20 256 -6 2964 135 128 24 chr5 187982936 187983490 -11646660 + LTR9 LTR ERV1 1 612 0 262 157 0 39 chr5 187983585 187983636 -11646514 + LTR30 LTR ERV1 1 49 -673 1243 76 119 76 chr5 187983636 187983846 -11646304 + LTR12 LTR ERV1 52 270 -444 264 306 10 0 chr5 187983853 187983951 -11646199 + LTR30 LTR ERV1 544 642 -80 634 162 10 0 chr5 187983952 187984051 -11646099 + LTR12 LTR ERV1 482 581 -133 284 263 263 0 chr5 187984460 187984555 -11645595 - L2 LINE L2 -1 3312 3193 319 378 0 31 chr5 187984568 187984695 -11645455 - L2 LINE L2 0 3272 3150 2522 250 132 13 chr5 187984891 187985784 -11644366 + L1MD2 LINE L1 4398 5396 -750 810 118 7 15 chr5 187985785 187985921 -11644229 + AluJo SINE Alu 1 135 -177 3997 205 45 28 chr5 187985943 187986049 -11644101 + L1MD2 LINE L1 5385 5488 -871 2394 67 0 0 chr5 187986049 187986348 -11643802 + AluY SINE Alu 1 299 -12 3997 205 45 28 chr5 187986348 187986983 -11643167 + L1MD2 LINE L1 5488 6148 -211 189 0 0 0 chr5 187986983 187987004 -11643146 + (CA)n Simple_repeat Simple_repeat 2 22 0 3997 205 45 28 chr5 187987004 187987194 -11642956 + L1MD2 LINE L1 6148 6333 -26 854 118 0 42 chr5 187987227 187987371 -11642779 - FLAM_C SINE Alu -1 142 5 426 262 29 0 chr5 187988005 187988108 -11642042 + L2 LINE L2 3188 3293 -20 247 165 31 155 chr5 187988409 187988506 -11641644 - L2 LINE L2 -541 2773 2689 209 302 0 0 chr5 187988502 187988555 -11641595 - L2 LINE L2 0 3272 3220 * 546 261 7 0 chr5 187988676 187988814 -11641336 - MER103 DNA DNA -20 146 8 2243 87 3 0 chr5 187988834 187989132 -11641018 - AluSg SINE Alu 0 310 12 313 218 209 55 chr5 187989172 187989282 -11640868 - MIR SINE MIR -65 143 17 764 253 85 30 chr5 187989491 187989783 -11640367 - L1ME3 LINE L1 -42 6120 5799 309 26 0 0 chr5 187989986 187990024 -11640126 + (CA)n Simple_repeat Simple_repeat 1 38 0 2171 251 52 57 chr5 187990027 187990675 -11639475 + L1ME2 LINE L1 3026 3676 -2488 2075 95 18 0 chr5 187990675 187990960 -11639190 - AluSx SINE Alu -22 290 1 2171 251 52 57 chr5 187990960 187991782 -11638368 + L1ME2 LINE L1 3676 6155 -9 413 281 7 22 chr5 187992404 187992539 -11637611 - L2 LINE L2 -214 3058 2926 343 254 218 42 chr5 187993066 187993259 -11636891 + MIR SINE MIR 23 249 -13 1140 282 41 22 chr5 187993354 187993654 -11636496 + L1MC4a LINE L1 5521 5831 -1977 1679 193 36 17 chr5 187993654 187994011 -11636139 + MLT1A1 LTR MaLR 1 364 -1 1140 282 41 22 chr5 187994011 187994075 -11636075 + L1MC4a LINE L1 5831 5892 -1916 2142 114 0 3 chr5 187994075 187994374 -11635776 + AluSx SINE Alu 1 298 -14 240 160 47 9 chr5 187995239 187995345 -11634805 + (TA)n Simple_repeat Simple_repeat 1 110 0 1961 131 0 0 chr5 187995383 187995695 -11634455 + AluSx SINE Alu 1 312 0 211 163 47 0 chr5 187997114 187997157 -11632993 - L2 LINE L2 -1 3271 3227 195 275 75 12 chr5 187997251 187997331 -11632819 - L2 LINE L2 -676 2638 2554 430 263 88 22 chr5 187997998 187998135 -11632015 - MIR SINE MIR -102 160 15 203 200 36 18 chr5 187999163 187999218 -11630932 + MIR SINE MIR 82 137 -71 1073 310 28 13 chr5 187999387 187999780 -11630370 - MLT1K LTR MaLR -164 424 26 257 337 17 56 chr5 187999991 188000175 -11629975 + MIR SINE MIR 7 145 -63 790 254 35 85 chr5 188000179 188000439 -11629711 - MIR SINE MIR 0 262 16 289 356 22 7 chr5 188000833 188000968 -11629182 - L2 LINE L2 0 3272 3136 202 208 0 19 chr5 188001007 188001060 -11629090 + MIR SINE MIR 130 181 -81 948 189 10 63 chr5 188001286 188001486 -11628664 + L1MB5 LINE L1 5930 6139 -35 2038 98 0 4 chr5 188001486 188001763 -11628387 + AluSq SINE Alu 6 281 -32 225 0 0 0 chr5 188001768 188001793 -11628357 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 948 189 10 63 chr5 188001793 188001838 -11628312 + L1MB5 LINE L1 6143 6168 -6 2605 206 132 46 chr5 188002084 188002432 -11627718 + L1ME2 LINE L1 5178 5495 -669 2027 96 0 7 chr5 188002432 188002712 -11627438 + AluSx SINE Alu 35 312 0 2605 206 132 46 chr5 188002712 188003049 -11627101 + L1ME2 LINE L1 5495 5802 -362 2007 136 0 0 chr5 188003049 188003343 -11626807 + AluSx SINE Alu 1 294 -18 2605 206 132 46 chr5 188003343 188003556 -11626594 + L1ME2 LINE L1 5802 6155 -9 1716 172 17 0 chr5 188003581 188003872 -11626278 + AluJo SINE Alu 1 296 -16 464 240 23 0 chr5 188003888 188004017 -11626133 + L1MC4a LINE L1 5605 5736 -428 * 744 261 72 70 chr5 188004008 188004061 -11626089 + L1ME3A LINE L1 2148 2199 -3947 2371 65 3 13 chr5 188004061 188004369 -11625781 - AluY SINE Alu -6 305 1 744 261 72 70 chr5 188004369 188004578 -11625572 + L1ME3A LINE L1 2199 2406 -3740 886 171 0 68 chr5 188004578 188004754 -11625396 + FRAM SINE Alu 1 164 -2 744 261 72 70 chr5 188004754 188004962 -11625188 + L1ME3A LINE L1 2406 2620 -3526 2223 268 79 23 chr5 188005028 188005796 -11624354 + L1ME3A LINE L1 4830 5698 -472 2057 71 0 11 chr5 188005796 188006064 -11624086 + L1PA8 LINE L1 5908 6172 0 2223 268 79 23 chr5 188006064 188006560 -11623590 + L1ME3A LINE L1 5698 6165 -5 2035 111 7 3 chr5 188006572 188006861 -11623289 + AluSq SINE Alu 6 295 -18 446 251 137 30 chr5 188006874 188007023 -11623127 - L1ME LINE L1 -501 5620 5461 2209 99 0 10 chr5 188007240 188007554 -11622596 + AluSq SINE Alu 3 313 0 458 107 0 13 chr5 188007556 188007631 -11622519 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 442 292 31 31 chr5 188007675 188007867 -11622283 + MIR3 SINE MIR 17 208 0 323 344 26 15 chr5 188009953 188010148 -11620002 + L1MC4a LINE L1 5763 5959 -1849 2630 124 35 2 chr5 188010366 188010792 -11619358 + L1PA16 LINE L1 5718 6157 -9 25 31 0 0 chr5 188010793 188010825 -11619325 + AT_rich Low_complexity Low_complexity 1 32 0 368 295 184 29 chr5 188011065 188011189 -11618961 + MIR SINE MIR 23 126 -136 2022 134 0 0 chr5 188011189 188011494 -11618656 + AluSx SINE Alu 1 305 -7 368 295 184 29 chr5 188011494 188011576 -11618574 + MIR SINE MIR 126 261 -1 482 329 53 20 chr5 188012522 188012826 -11617324 + L2 LINE L2 2473 2786 -528 2835 223 28 43 chr5 188012845 188013147 -11617003 + MER82 DNA MER2_type 10 315 -338 2054 116 0 3 chr5 188013147 188013440 -11616710 - AluSg SINE Alu -18 292 1 2835 223 28 43 chr5 188013440 188013791 -11616359 + MER82 DNA MER2_type 315 653 0 259 314 78 37 chr5 188013841 188014032 -11616118 + MLT1K LTR MaLR 154 352 -236 352 316 62 23 chr5 188014731 188014908 -11615242 - MIR SINE MIR -50 212 29 514 266 57 74 chr5 188015157 188015225 -11614925 - MIR SINE MIR -21 241 173 455 222 91 0 chr5 188015225 188015324 -11614826 - MER81 DNA DNA -3 111 4 514 266 57 74 chr5 188015324 188015484 -11614666 - MIR SINE MIR -89 173 17 553 275 97 29 chr5 188016666 188016873 -11613277 - MIR SINE MIR -10 252 32 270 324 65 47 chr5 188017203 188017373 -11612777 - MLT1L LTR MaLR -25 590 418 1940 138 82 74 chr5 188018405 188018867 -11611283 + MER31B LTR ERV1 1 466 0 780 255 108 38 chr5 188018867 188019181 -11610969 + LTR16A LTR ERVL 120 457 0 2316 284 59 13 chr5 188019189 188020022 -11610128 + HERV16 LTR ERVL 23 893 -4103 365 324 82 10 chr5 188020069 188020276 -11609874 + HERV16 LTR ERVL 967 1188 -3808 332 339 78 17 chr5 188020385 188020615 -11609535 + HERV16 LTR ERVL 1313 1556 -3440 421 316 32 0 chr5 188020732 188020923 -11609227 + HERV16 LTR ERVL 1753 1869 -3127 2155 290 64 37 chr5 188020949 188021714 -11608436 + HERV16 LTR ERVL 2045 2830 -2166 1105 129 0 18 chr5 188021714 188021884 -11608266 + FRAM SINE Alu 1 159 -17 1412 335 33 28 chr5 188021884 188022573 -11607577 + HERV16 LTR ERVL 2837 3529 -1956 249 368 22 15 chr5 188022816 188022952 -11607198 + MIR SINE MIR 13 149 -113 21 0 0 0 chr5 188023650 188023671 -11606479 + AT_rich Low_complexity Low_complexity 1 21 0 220 284 211 9 chr5 188023715 188023824 -11606326 + MIR3 SINE MIR 28 158 -50 243 281 79 11 chr5 188023885 188023974 -11606176 - L3 LINE CR1 -1 1576 1482 295 289 134 66 chr5 188024371 188024841 -11605309 - MLT1K LTR MaLR -74 514 13 192 269 19 0 chr5 188025470 188025522 -11604628 + MIR SINE MIR 90 142 -66 256 82 20 20 chr5 188026382 188026431 -11603719 + (GA)n Simple_repeat Simple_repeat 2 50 0 482 252 101 0 chr5 188027531 188027650 -11602500 + L2 LINE L2 3141 3271 -1 462 213 30 153 chr5 188028258 188028526 -11601624 + L1ME LINE L1 5589 5823 -298 852 231 168 29 chr5 188028987 188029163 -11600987 + L1MD3 LINE L1 6443 6593 -1402 471 113 0 0 chr5 188029163 188029234 -11600916 + (TG)n Simple_repeat Simple_repeat 2 72 0 852 231 168 29 chr5 188029234 188029373 -11600777 + L1MD3 LINE L1 6593 6802 -1193 1462 227 38 78 chr5 188029379 188029573 -11600577 + LTR40c LTR ERVL 7 207 -258 2143 96 0 3 chr5 188029573 188029866 -11600284 + AluY SINE Alu 1 292 -19 1462 227 38 78 chr5 188029866 188029877 -11600273 + LTR40c LTR ERVL 207 217 -248 1927 152 7 0 chr5 188029877 188030180 -11599970 + AluJb SINE Alu 1 305 -7 1462 227 38 78 chr5 188030180 188030445 -11599705 + LTR40c LTR ERVL 217 459 -6 855 234 65 5 chr5 188030453 188030667 -11599483 + L1MC4 LINE L1 6834 7060 -982 529 340 140 12 chr5 188030779 188031100 -11599050 + MLT1K LTR MaLR 13 374 -214 585 341 70 8 chr5 188031142 188031400 -11598750 + LTR67 LTR ERVL 1 274 -283 400 341 26 31 chr5 188031503 188031729 -11598421 + LTR67 LTR ERVL 330 554 -3 367 268 149 31 chr5 188032816 188033010 -11597140 + MLT1J LTR MaLR 1 217 -294 904 249 80 97 chr5 188033253 188033350 -11596800 - L1MC4a LINE L1 -644 5517 5420 2256 137 19 22 chr5 188033350 188033715 -11596435 + THE1B LTR MaLR 1 364 0 904 249 80 97 chr5 188033715 188033794 -11596356 - L1MC4a LINE L1 -741 5420 5791 3391 104 14 0 chr5 188033794 188034282 -11595868 - L1PA16 LINE L1 -10 6156 5662 904 249 80 97 chr5 188034282 188034683 -11595467 - L1MC4a LINE L1 -369 5792 5386 293 344 0 0 chr5 188034835 188034928 -11595222 + MIR SINE MIR 166 258 -4 1893 225 78 34 chr5 188034995 188035563 -11594587 + MLT1E LTR MaLR 1 593 0 266 281 55 39 chr5 188035791 188035919 -11594231 + MIR3 SINE MIR 3 132 -76 329 62 21 0 chr5 188036640 188036688 -11593462 + (GAAA)n Simple_repeat Simple_repeat 2 50 0 2003 116 0 26 chr5 188037219 188037530 -11592620 + AluJb SINE Alu 4 306 -6 374 141 8 4 chr5 188037710 188037842 -11592308 + MER53 DNA DNA 13 189 0 732 157 164 0 chr5 188038801 188038941 -11591209 + FRAM SINE Alu 11 173 -3 440 286 71 25 chr5 188038944 188039140 -11591010 + MIR SINE MIR 18 222 -40 280 207 207 0 chr5 188039359 188039441 -11590709 - L2 LINE L2 -19 3294 3196 * 717 243 68 6 chr5 188039434 188039611 -11590539 - MIR SINE MIR -56 206 19 346 214 90 79 chr5 188039624 188039802 -11590348 - MIR SINE MIR -71 191 12 225 119 0 0 chr5 188040314 188040356 -11589794 + (ATTG)n Simple_repeat Simple_repeat 2 43 0 1792 138 3 3 chr5 188040356 188040640 -11589510 - AluJb SINE Alu -28 284 1 1553 240 60 71 chr5 188040960 188041185 -11588965 - MLT1K LTR MaLR 0 588 362 2255 130 25 33 chr5 188041185 188041343 -11588807 + MLT1B LTR MaLR 1 159 -231 2011 113 7 10 chr5 188041343 188041653 -11588497 + AluSg SINE Alu 1 309 -1 2255 130 25 33 chr5 188041653 188041887 -11588263 + MLT1B LTR MaLR 159 390 0 1553 240 60 71 chr5 188041887 188042199 -11587951 - MLT1K LTR MaLR -226 362 57 1977 135 3 0 chr5 188042317 188042628 -11587522 - AluSx SINE Alu 0 312 1 715 221 236 0 chr5 188042913 188043121 -11587029 + MIR SINE MIR 6 262 0 1884 169 22 14 chr5 188043211 188043571 -11586579 - MLT1A1 LTR MaLR -2 363 1 196 273 136 0 chr5 188043625 188043691 -11586459 + L2 LINE L2 3239 3313 0 229 211 65 154 chr5 188044985 188045108 -11585042 + MLT1L LTR MaLR 124 235 -380 1956 106 3 20 chr5 188045361 188045654 -11584496 + AluSc SINE Alu 1 288 -21 1550 195 0 7 chr5 188046071 188046373 -11583777 - AluJo SINE Alu -2 310 11 1698 106 0 0 chr5 188046556 188046792 -11583358 - AluSx SINE Alu -32 280 45 24 0 0 0 chr5 188046881 188046905 -11583245 + AT_rich Low_complexity Low_complexity 1 24 0 332 280 19 12 chr5 188046950 188047060 -11583090 - MIR SINE MIR -63 145 41 355 291 52 22 chr5 188047932 188048066 -11582084 + MIR3 SINE MIR 11 148 -60 201 143 18 125 chr5 188049040 188049096 -11581054 - L2 LINE L2 -10 3303 3254 569 349 40 8 chr5 188049328 188049577 -11580573 - MIR SINE MIR -3 259 3 237 159 0 0 chr5 188049681 188049725 -11580425 + (CAT)n Simple_repeat Simple_repeat 3 46 0 349 250 0 0 chr5 188049792 188049864 -11580286 + MIR SINE MIR 75 146 -62 986 235 15 118 chr5 188050608 188050940 -11579210 - Charlie8 DNA MER1_type -2141 276 4 711 274 0 6 chr5 188050976 188051140 -11579010 + MIR SINE MIR 44 206 -56 340 295 33 16 chr5 188051540 188051662 -11578488 + MIR SINE MIR 63 186 -76 1264 296 18 15 chr5 188051773 188052286 -11577864 + MLT1K LTR MaLR 20 576 -12 240 247 0 39 chr5 188052219 188052296 -11577854 + LTR67 LTR ERVL 484 557 0 * 1183 139 22 49 chr5 188052481 188052704 -11577446 + MER20 DNA MER1_type 1 217 -2 459 310 7 0 chr5 188053184 188053339 -11576811 - MER103 DNA DNA -2 164 9 186 298 0 0 chr5 188053593 188053650 -11576500 - L2 LINE L2 -9 3263 3207 801 140 7 7 chr5 188053668 188053804 -11576346 + AluJo SINE Alu 1 136 -176 1221 142 33 5 chr5 188055133 188055344 -11574806 + L1PA16 LINE L1 5941 6157 -9 2239 102 3 0 chr5 188055694 188055998 -11574152 + AluSq SINE Alu 1 305 -8 218 267 0 0 chr5 188056751 188056796 -11573354 - L2 LINE L2 -235 3037 2993 848 284 62 80 chr5 188056845 188057408 -11572742 + MLT1K LTR MaLR 23 575 -13 281 264 41 58 chr5 188057571 188057692 -11572458 - MIR3 SINE MIR -15 193 75 331 288 36 41 chr5 188057806 188057962 -11572188 + MIR SINE MIR 1 147 -61 419 218 148 10 chr5 188058123 188058224 -11571926 + L2 LINE L2 3195 3309 -4 * 523 300 185 6 chr5 188058217 188058621 -11571529 - L2 LINE L2 -133 3180 2706 208 194 0 0 chr5 188058673 188058704 -11571446 + L2 LINE L2 3219 3249 -23 492 133 0 0 chr5 188059239 188059322 -11570828 + (TC)n Simple_repeat Simple_repeat 2 84 0 237 353 171 11 chr5 188060010 188060361 -11569789 + L2 LINE L2 2890 3296 -17 305 335 102 19 chr5 188061505 188061711 -11568439 - MIR SINE MIR -34 228 6 878 149 27 0 chr5 188061771 188061919 -11568231 + AluJo SINE Alu 138 289 -23 589 268 43 77 chr5 188066062 188066272 -11563878 - MIR SINE MIR -44 218 23 326 248 113 35 chr5 188067000 188067069 -11563081 + L1ME LINE L1 5511 5573 -548 306 75 57 0 chr5 188067069 188067122 -11563028 + L1PA6 LINE L1 6099 6154 0 326 248 113 35 chr5 188067122 188067193 -11562957 + L1ME LINE L1 5573 5662 -459 1944 152 0 0 chr5 188067809 188068112 -11562038 + AluSx SINE Alu 1 303 -9 360 257 97 14 chr5 188068814 188068958 -11561192 - MER117 DNA MER1_type -41 156 1 1413 181 33 0 chr5 188069004 188069275 -11560875 - MER58B DNA MER1_type 0 341 62 21 36 0 0 chr5 188069599 188069627 -11560523 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 188070051 188070075 -11560075 + AT_rich Low_complexity Low_complexity 1 24 0 331 281 165 64 chr5 188070861 188071110 -11559040 + L1ME LINE L1 3894 4167 -1979 21 36 0 0 chr5 188071187 188071215 -11558935 + AT_rich Low_complexity Low_complexity 1 28 0 225 0 0 0 chr5 188072215 188072240 -11557910 + (CA)n Simple_repeat Simple_repeat 2 26 0 302 244 37 24 chr5 188072371 188072453 -11557697 + MIR SINE MIR 81 163 -99 205 264 188 35 chr5 188074984 188075128 -11555022 + L3b LINE CR1 1374 1539 -44 1763 171 17 0 chr5 188075191 188075484 -11554666 + AluJb SINE Alu 1 298 -14 1506 181 51 0 chr5 188075715 188076215 -11553935 + L1ME LINE L1 4921 5519 -655 558 202 6 36 chr5 188076402 188076543 -11553607 + L1MB7 LINE L1 5471 5604 -537 834 143 16 139 chr5 188076543 188076787 -11553363 + AluJo SINE Alu 84 297 -15 1933 202 68 41 chr5 188076807 188076961 -11553189 + L1MB7 LINE L1 5649 5797 -387 765 136 53 45 chr5 188076961 188077093 -11553057 + FLAM_C SINE Alu 1 133 0 1933 202 68 41 chr5 188077093 188077452 -11552698 + L1MB7 LINE L1 5797 6176 -8 361 342 63 19 chr5 188077532 188077690 -11552460 + L2 LINE L2 3107 3271 -1 323 243 164 14 chr5 188077692 188077832 -11552318 + MIR SINE MIR 58 218 -44 2365 125 47 26 chr5 188078442 188078865 -11551285 + MSTB1 LTR MaLR 1 432 0 1388 186 25 11 chr5 188080258 188080380 -11549770 + AluJo SINE Alu 1 120 -192 468 100 0 0 chr5 188080380 188080460 -11549690 + (TG)n Simple_repeat Simple_repeat 2 81 0 1388 186 25 11 chr5 188080460 188080611 -11549539 + AluJo SINE Alu 120 278 -34 232 239 60 15 chr5 188080657 188080724 -11549426 + L1ME LINE L1 5549 5618 -503 4981 236 78 44 chr5 188080975 188082535 -11547615 - L1MC1 LINE L1 -369 6244 4738 2163 83 3 3 chr5 188082535 188082823 -11547327 - AluSx SINE Alu -24 288 1 4981 236 78 44 chr5 188082823 188084145 -11546005 - L1MC1 LINE L1 -1875 4738 3209 1637 168 0 14 chr5 188084145 188084431 -11545719 - AluJo SINE Alu -30 282 1 4981 236 78 44 chr5 188084431 188084571 -11545579 - L1MC1 LINE L1 -3404 3209 3075 3583 132 14 7 chr5 188084621 188085191 -11544959 - L1PB1 LINE L1 0 6151 5578 1285 44 0 0 chr5 188085207 188085367 -11544783 + L1PA4 LINE L1 5996 6155 0 4471 163 10 72 chr5 188085371 188086751 -11543399 - L1PB1 LINE L1 -559 5592 4306 3466 162 93 4 chr5 188086752 188087443 -11542707 - L1MC1 LINE L1 -5641 785 34 3601 16 43 0 chr5 188087973 188088433 -11541717 + L1PA4 LINE L1 5699 6176 0 2106 121 0 22 chr5 188088558 188088872 -11541278 + AluSx SINE Alu 1 307 -5 427 247 62 0 chr5 188088875 188089021 -11541129 + MER103 DNA DNA 1 155 -11 205 186 0 0 chr5 188089206 188089249 -11540901 + A-rich Low_complexity Low_complexity 1 43 0 2179 103 43 3 chr5 188089484 188089785 -11540365 - AluSq SINE Alu 0 313 1 637 266 166 39 chr5 188090345 188090990 -11539160 + L1ME LINE L1 494 1185 -4895 * 2040 196 20 43 chr5 188090988 188091073 -11539077 + L1MC/D LINE L1 5083 5168 -1348 2309 119 0 0 chr5 188091073 188091375 -11538775 + AluSx SINE Alu 2 303 -9 2040 196 20 43 chr5 188091375 188091431 -11538719 + L1MC/D LINE L1 5168 5224 -1292 2052 130 0 34 chr5 188091431 188091753 -11538397 + AluSp SINE Alu 1 311 -2 2040 196 20 43 chr5 188091753 188092072 -11538078 + L1MC/D LINE L1 5224 5522 -994 1309 112 197 42 chr5 188092072 188092331 -11537819 + AluSx SINE Alu 1 299 -3 2040 196 20 43 chr5 188092331 188092578 -11537572 + L1MC/D LINE L1 5522 5773 -743 324 295 89 0 chr5 188093970 188094082 -11536068 - L2 LINE L2 -2 3270 3149 234 345 124 9 chr5 188094187 188094300 -11535850 - MIR SINE MIR -67 141 16 260 210 105 126 chr5 188094816 188094959 -11535191 - MIR SINE MIR -13 249 110 234 0 0 0 chr5 188095248 188095274 -11534876 + (A)n Simple_repeat Simple_repeat 1 26 0 212 320 50 20 chr5 188096624 188096724 -11533426 + MIR SINE MIR 133 235 -27 180 111 0 0 chr5 188097636 188097663 -11532487 + (CAA)n Simple_repeat Simple_repeat 2 28 0 275 304 152 46 chr5 188098431 188098648 -11531502 + MIR SINE MIR 23 262 0 357 316 63 49 chr5 188098829 188099070 -11531080 + MIR SINE MIR 2 241 -21 221 328 179 25 chr5 188102179 188102380 -11527770 - MIR SINE MIR -30 232 1 199 279 177 13 chr5 188102635 188102714 -11527436 - L3 LINE CR1 -30 1547 1456 236 283 24 89 chr5 188102846 188103028 -11527122 + MIR SINE MIR 22 189 -73 264 229 138 28 chr5 188103150 188103259 -11526891 + MIR SINE MIR 92 212 -50 755 337 68 67 chr5 188103347 188104122 -11526028 - L3 LINE CR1 -486 1091 316 306 246 98 25 chr5 188104188 188104310 -11525840 - L1ME4a LINE L1 -21 6100 5970 215 298 0 0 chr5 188104475 188104522 -11525628 + MER91 DNA MER1_type 1 47 -93 1802 161 4 7 chr5 188104944 188105224 -11524926 - AluJo SINE Alu -33 279 1 1237 164 0 35 chr5 188105493 188105694 -11524456 - AluJb SINE Alu -33 279 86 1772 165 13 23 chr5 188105847 188106150 -11524000 + AluSx SINE Alu 7 306 -6 254 216 23 18 chr5 188106316 188106387 -11523763 + MER5A DNA MER1_type 50 136 -53 2298 105 0 0 chr5 188106391 188106696 -11523454 - AluSc SINE Alu -4 305 1 410 316 60 23 chr5 188106992 188107125 -11523025 + MIR SINE MIR 17 129 -79 323 267 11 0 chr5 188107123 188107213 -11522937 - MIR SINE MIR -49 213 123 * 513 218 189 23 chr5 188108425 188108633 -11521517 - MIR SINE MIR -20 242 5 334 285 42 49 chr5 188110236 188110380 -11519770 + MIR3 SINE MIR 60 202 -6 656 197 0 16 chr5 188110998 188111125 -11519025 + FLAM_A SINE Alu 6 130 -12 25 0 0 0 chr5 188111143 188111168 -11518982 + AT_rich Low_complexity Low_complexity 1 25 0 1406 168 81 22 chr5 188111171 188111492 -11518658 + L1MC1 LINE L1 5994 6333 0 201 195 0 0 chr5 188111512 188111553 -11518597 + (TG)n Simple_repeat Simple_repeat 2 42 0 2271 118 0 3 chr5 188111888 188112193 -11517957 - AluSq SINE Alu -9 304 1 918 189 16 11 chr5 188113079 188113264 -11516886 - MER5A DNA MER1_type -1 188 3 440 279 123 59 chr5 188114302 188114451 -11515699 + L1ME4a LINE L1 5682 5820 -301 2115 111 7 10 chr5 188114451 188114748 -11515402 + AluSx SINE Alu 1 296 -16 440 279 123 59 chr5 188114748 188114971 -11515179 + L1ME4a LINE L1 5820 6078 -43 591 15 0 0 chr5 188115634 188115702 -11514448 + (CA)n Simple_repeat Simple_repeat 1 68 0 342 0 0 0 chr5 188117440 188117478 -11512672 + (TG)n Simple_repeat Simple_repeat 1 38 0 3642 46 2 7 chr5 188117621 188118077 -11512073 + L1PA5 LINE L1 5698 6151 -3 2276 115 0 0 chr5 188118741 188119045 -11511105 - AluSc SINE Alu -5 304 1 297 0 0 0 chr5 188119593 188119626 -11510524 + (TG)n Simple_repeat Simple_repeat 2 34 0 451 151 58 0 chr5 188120013 188120099 -11510051 + Tigger4(Zombi) DNA MER2_type 146 2731 0 773 202 48 39 chr5 188120535 188120743 -11509407 - MER20 DNA MER1_type -9 210 1 191 284 68 54 chr5 188121075 188121149 -11509001 + MER5B DNA MER1_type 104 189 0 405 320 122 5 chr5 188121391 188121588 -11508562 - MIR SINE MIR -3 259 40 2332 107 0 22 chr5 188121700 188122019 -11508131 + AluSx SINE Alu 1 312 0 23 0 0 0 chr5 188122238 188122261 -11507889 + AT_rich Low_complexity Low_complexity 1 23 0 1148 208 110 8 chr5 188122269 188122533 -11507617 + AluJo SINE Alu 1 291 -11 272 304 0 43 chr5 188123199 188123291 -11506859 - MIR SINE MIR -155 107 20 1639 202 7 7 chr5 188123576 188123858 -11506292 - AluJo SINE Alu -25 287 6 252 0 0 0 chr5 188123901 188123929 -11506221 + (GGGA)n Simple_repeat Simple_repeat 4 31 0 309 51 0 0 chr5 188124723 188124762 -11505388 + (TG)n Simple_repeat Simple_repeat 1 39 0 1933 130 7 0 chr5 188124762 188125039 -11505111 - AluSx SINE Alu -33 279 1 705 252 84 9 chr5 188125046 188125379 -11504771 - L1M4 LINE L1 -809 5337 4980 285 230 70 10 chr5 188125416 188125516 -11504634 - MER112 DNA MER1_type -1 259 154 398 147 33 35 chr5 188125533 188125643 -11504507 + HsTC2 DNA Tc2 4 1830 -68 983 225 77 139 chr5 188125671 188125740 -11504410 + LTR28 LTR ERV1 1 73 -1682 2434 84 7 0 chr5 188125740 188126048 -11504102 - AluSg SINE Alu 0 310 1 983 225 77 139 chr5 188126048 188126875 -11503275 + LTR28 LTR ERV1 73 1507 -248 210 37 0 0 chr5 188127238 188127265 -11502885 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1298 184 0 26 chr5 188127293 188127527 -11502623 - AluJo SINE Alu 0 312 85 395 249 112 24 chr5 188127531 188127736 -11502414 - MER113 DNA MER1_type? -297 224 2 270 319 21 0 chr5 188128087 188128181 -11501969 + MIR SINE MIR 102 197 -65 2214 131 106 8 chr5 188128202 188128590 -11501560 + MSTA LTR MaLR 1 426 -2 353 271 23 68 chr5 188128594 188128727 -11501423 + L2 LINE L2 3183 3309 -4 472 242 89 57 chr5 188128742 188129056 -11501094 + L1M4 LINE L1 4877 5200 -946 226 214 0 14 chr5 188129264 188129334 -11500816 + L1M LINE L1 5302 5370 -974 494 204 88 0 chr5 188129757 188129870 -11500280 + L2 LINE L2 1905 2027 -1287 1011 235 33 25 chr5 188130043 188130405 -11499745 + L1 LINE L1 4453 4817 -1329 333 164 212 13 chr5 188130426 188130592 -11499558 + L1M4 LINE L1 3917 4110 -2036 2187 121 3 0 chr5 188130617 188130914 -11499236 + AluSx SINE Alu 1 298 -14 1912 122 21 10 chr5 188130916 188131204 -11498946 + AluSx SINE Alu 1 291 -21 2393 76 0 10 chr5 188131396 188131710 -11498440 + AluY SINE Alu 1 311 0 3717 201 50 104 chr5 188132084 188132357 -11497793 + L1MC1 LINE L1 3972 4258 -2075 1905 24 0 0 chr5 188132357 188132566 -11497584 + SVA Other Other 1177 1385 -1 3717 201 50 104 chr5 188132566 188133625 -11496525 + L1MC1 LINE L1 4258 5373 -960 686 72 10 0 chr5 188133625 188133722 -11496428 + (TC)n Simple_repeat Simple_repeat 1 98 0 1813 169 0 0 chr5 188133722 188134001 -11496149 - AluJb SINE Alu -33 279 1 3717 201 50 104 chr5 188134001 188134664 -11495486 + L1MC1 LINE L1 5372 5778 -555 1664 170 9 44 chr5 188134664 188134981 -11495169 + AluJo SINE Alu 1 306 -6 3717 201 50 104 chr5 188134981 188135436 -11494714 + L1MC1 LINE L1 5778 6256 -77 544 245 40 35 chr5 188135789 188135989 -11494161 - MER105 DNA DNA -2 202 2 662 303 55 83 chr5 188136092 188136222 -11493928 + HAL1b LINE L1 -6 126 -1205 1934 150 7 3 chr5 188136222 188136528 -11493622 + AluSx SINE Alu 1 307 -5 662 303 55 83 chr5 188136528 188136712 -11493438 + HAL1b LINE L1 126 146 -1185 905 160 14 61 chr5 188136712 188136773 -11493377 + L1MB8 LINE L1 5971 6033 -145 2346 68 16 13 chr5 188136773 188137083 -11493067 - AluY SINE Alu 0 311 1 905 160 14 61 chr5 188137083 188137234 -11492916 + L1MB8 LINE L1 6033 6173 -5 662 303 55 83 chr5 188137234 188137557 -11492593 + HAL1b LINE L1 146 477 -854 2336 115 0 0 chr5 188137655 188137967 -11492183 + AluSx SINE Alu 1 312 0 1789 157 7 26 chr5 188138037 188138342 -11491808 + AluJo SINE Alu 1 299 -13 1010 178 17 0 chr5 188139200 188139380 -11490770 - MER58A DNA MER1_type -3 221 39 2007 141 29 10 chr5 188139380 188139686 -11490464 + AluJb SINE Alu 1 312 0 2253 225 44 32 chr5 188139802 188139891 -11490259 + L1MC4 LINE L1 5254 5340 -2468 1671 161 10 20 chr5 188139891 188140189 -11489961 - AluJo SINE Alu -17 295 1 2253 225 44 32 chr5 188140189 188140780 -11489370 + L1MC4 LINE L1 5340 5942 -1866 2113 125 6 10 chr5 188140780 188141091 -11489059 + AluSg SINE Alu 1 310 0 2016 139 7 3 chr5 188141244 188141553 -11488597 + AluJo SINE Alu 3 312 0 951 177 84 78 chr5 188141627 188141949 -11488201 + MER2 DNA MER2_type 3 326 -19 2098 219 91 37 chr5 188141952 188142434 -11487716 + L1MC4 LINE L1 6421 6946 -1096 2259 90 7 0 chr5 188142434 188142723 -11487427 + AluSg SINE Alu 1 291 -19 2098 219 91 37 chr5 188142723 188142866 -11487284 + L1MC4 LINE L1 6946 7080 -962 1806 254 77 8 chr5 188142870 188143491 -11486659 + L1MC4 LINE L1 7238 7901 -141 225 236 0 0 chr5 188143857 188143912 -11486238 - L1MC4 LINE L1 -2 8040 7986 1153 267 97 5 chr5 188143914 188144348 -11485802 - L1MC4 LINE L1 -141 7901 7428 1704 159 4 11 chr5 188144363 188144633 -11485517 + AluJb SINE Alu 20 287 -25 58 15 0 0 chr5 188144633 188144698 -11485452 + AT_rich Low_complexity Low_complexity 1 65 0 2131 103 27 0 chr5 188145283 188145575 -11484575 - AluSc SINE Alu -9 300 1 26 0 0 0 chr5 188146052 188146078 -11484072 + AT_rich Low_complexity Low_complexity 1 26 0 2346 61 10 13 chr5 188146121 188146433 -11483717 + AluY SINE Alu 1 311 0 879 239 50 64 chr5 188146768 188147065 -11483085 - L2 LINE L2 0 3313 3021 490 284 60 37 chr5 188147208 188147426 -11482724 + MIR SINE MIR 34 256 -6 1884 166 49 29 chr5 188147732 188148117 -11482033 + MLT2C1 LTR ERVL 1 393 -4 1317 245 85 30 chr5 188148138 188148632 -11481518 + L2 LINE L2 2633 3180 -133 2424 91 3 0 chr5 188148632 188148940 -11481210 - AluSx SINE Alu -3 309 1 1317 245 85 30 chr5 188148940 188149081 -11481069 + L2 LINE L2 3180 3312 -1 302 171 66 13 chr5 188149099 188149175 -11480975 + L1ME4a LINE L1 6033 6112 -9 711 167 0 58 chr5 188149243 188149381 -11480769 + FLAM_C SINE Alu 1 130 -3 307 192 103 0 chr5 188149463 188149541 -11480609 + L1ME LINE L1 5735 5820 -301 1213 198 0 5 chr5 188149543 188149755 -11480395 + AluJb SINE Alu 84 294 -18 21 0 0 0 chr5 188149756 188149777 -11480373 + AT_rich Low_complexity Low_complexity 1 21 0 2367 86 0 3 chr5 188149780 188150081 -11480069 + AluSg SINE Alu 1 300 -10 838 145 0 0 chr5 188150283 188150400 -11479750 + FLAM_C SINE Alu 2 118 -15 403 318 74 42 chr5 188151356 188151753 -11478397 + L1ME LINE L1 5176 5583 -538 232 312 47 18 chr5 188151775 188151945 -11478205 + L1ME LINE L1 5650 5824 -297 284 208 0 26 chr5 188152150 188152227 -11477923 + L1ME3A LINE L1 6082 6156 -14 2040 131 0 3 chr5 188152430 188152720 -11477430 + AluSx SINE Alu 1 289 -23 30 0 0 0 chr5 188152723 188152753 -11477397 + AT_rich Low_complexity Low_complexity 1 30 0 1873 171 0 7 chr5 188153081 188153386 -11476764 + AluJb SINE Alu 3 305 -7 1174 110 123 0 chr5 188153434 188153597 -11476553 - AluSx SINE Alu -129 183 1 346 202 11 11 chr5 188154192 188154274 -11475876 + (TA)n Simple_repeat Simple_repeat 2 86 -9 2367 86 10 0 chr5 188154274 188154576 -11475574 - AluSx SINE Alu -7 305 1 346 202 11 11 chr5 188154576 188154587 -11475563 + (TA)n Simple_repeat Simple_repeat 85 95 0 1397 48 76 33 chr5 188154598 188154808 -11475342 - MER30 DNA MER1_type -11 219 1 1570 153 3 89 chr5 188154808 188155122 -11475028 - AluJo SINE Alu -25 287 1 436 327 7 33 chr5 188155500 188155653 -11474497 - MIR3 SINE MIR -57 151 3 351 297 9 9 chr5 188156059 188156170 -11473980 + MIR SINE MIR 2 112 -150 235 191 0 0 chr5 188156459 188156501 -11473649 + L2 LINE L2 3226 3267 -5 320 222 144 11 chr5 188156827 188156917 -11473233 + MIR SINE MIR 119 220 -42 373 302 36 14 chr5 188159972 188160111 -11470039 - MIR SINE MIR -115 147 6 389 259 138 0 chr5 188160700 188160816 -11469334 - MER94 DNA DNA 0 134 3 217 265 29 29 chr5 188160828 188160896 -11469254 + MIR SINE MIR 16 83 -125 325 221 274 9 chr5 188161175 188161288 -11468862 - MIR SINE MIR -12 250 108 22 0 0 0 chr5 188161329 188161351 -11468799 + AT_rich Low_complexity Low_complexity 1 22 0 2118 135 6 6 chr5 188161388 188161699 -11468451 + AluSx SINE Alu 1 311 -1 1873 171 3 0 chr5 188161916 188162215 -11467935 + AluJb SINE Alu 1 300 -12 244 252 0 117 chr5 188162431 188162534 -11467616 - MIR3 SINE MIR -1 207 117 375 278 45 57 chr5 188162820 188163006 -11467144 - MIR SINE MIR -21 241 55 2282 104 0 0 chr5 188163472 188163769 -11466381 - AluSx SINE Alu -15 297 1 294 143 0 0 chr5 188165003 188165052 -11465098 + (CA)n Simple_repeat Simple_repeat 2 50 0 240 403 76 5 chr5 188165075 188165286 -11464864 - L2 LINE L2 -235 3037 2812 2013 134 7 10 chr5 188167068 188167373 -11462777 + AluSx SINE Alu 3 306 -6 1794 168 141 8 chr5 188167623 188167999 -11462151 + MSTA LTR MaLR 3 428 0 266 267 181 9 chr5 188168740 188168856 -11461294 - MIR SINE MIR -122 140 5 328 233 57 51 chr5 188168958 188169134 -11461016 + L1ME LINE L1 5550 5726 -395 21 0 0 0 chr5 188169355 188169376 -11460774 + AT_rich Low_complexity Low_complexity 1 21 0 2350 85 3 0 chr5 188169380 188169675 -11460475 + AluSp SINE Alu 1 296 -17 261 0 0 0 chr5 188169678 188169707 -11460443 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 333 0 0 0 chr5 188169706 188169743 -11460407 + (CA)n Simple_repeat Simple_repeat 2 38 0 2336 63 3 7 chr5 188169998 188170297 -11459853 + AluY SINE Alu 2 299 -12 2024 129 0 0 chr5 188170810 188171090 -11459060 + AluSg SINE Alu 1 280 -30 2074 132 0 10 chr5 188171523 188171827 -11458323 - AluSx SINE Alu -11 301 1 1673 131 105 37 chr5 188171974 188172325 -11457825 + THE1C LTR MaLR 1 375 0 191 244 0 0 chr5 188172879 188172920 -11457230 - MIR3 SINE MIR -17 191 151 1605 187 0 4 chr5 188173523 188173785 -11456365 + AluJb SINE Alu 1 261 -51 1546 163 12 4 chr5 188173786 188174031 -11456119 + AluJb SINE Alu 15 261 -51 1882 131 50 0 chr5 188174032 188174139 -11456011 + AluJo SINE Alu 15 115 -197 342 0 0 0 chr5 188174139 188174177 -11455973 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1882 131 50 0 chr5 188174177 188174351 -11455799 + AluJo SINE Alu 115 310 -2 2412 82 0 0 chr5 188174373 188174667 -11455483 - AluSx SINE Alu -18 294 1 586 204 58 58 chr5 188174961 188175236 -11454914 + L1MC5 LINE L1 7298 7572 -389 1749 152 10 56 chr5 188175257 188175665 -11454485 + L1MC3 LINE L1 7376 7764 -21 22 0 0 0 chr5 188175671 188175693 -11454457 + AT_rich Low_complexity Low_complexity 1 22 0 2261 112 3 0 chr5 188175975 188176279 -11453871 + AluSp SINE Alu 1 305 -8 963 179 0 0 chr5 188176414 188176559 -11453591 + FAM SINE Alu 20 164 -21 2077 107 18 0 chr5 188176634 188176915 -11453235 - AluSq SINE Alu -26 287 2 180 200 0 0 chr5 188176919 188176949 -11453201 + MIR SINE MIR 81 110 -152 345 296 134 23 chr5 188177401 188177573 -11452577 + MIR SINE MIR 66 256 -6 198 236 0 0 chr5 188177866 188177921 -11452229 + GA-rich Low_complexity Low_complexity 4 58 0 251 234 23 156 chr5 188178238 188178280 -11451870 - L2 LINE L2 -18 3254 3208 1442 152 91 120 chr5 188178280 188178587 -11451563 + MSTD LTR MaLR 1 315 -81 1845 153 42 0 chr5 188178587 188178875 -11451275 + AluSq SINE Alu 1 300 -13 1251 185 128 29 chr5 188178880 188179161 -11450989 + AluSg SINE Alu 1 309 -1 1442 152 91 120 chr5 188179161 188179255 -11450895 + MSTD LTR MaLR 319 396 0 251 234 23 156 chr5 188179255 188179340 -11450810 - L2 LINE L2 -64 3208 3144 2168 103 50 36 chr5 188179375 188179734 -11450416 - THE1B LTR MaLR 0 364 1 214 331 93 90 chr5 188179789 188180079 -11450071 - L2 LINE L2 -164 3108 2818 907 154 52 120 chr5 188180908 188181141 -11449009 + AluJb SINE Alu 76 292 -20 296 102 20 0 chr5 188181141 188181190 -11448960 + (CATA)n Simple_repeat Simple_repeat 3 52 0 207 244 35 23 chr5 188181248 188181334 -11448816 + T-rich Low_complexity Low_complexity 5 91 0 944 242 119 16 chr5 188181415 188181519 -11448631 + L1ME2 LINE L1 4910 5002 -1162 4871 51 0 0 chr5 188181519 188182110 -11448040 - LTR10C LTR ERV1 0 591 1 944 242 119 16 chr5 188182110 188182615 -11447535 + L1ME2 LINE L1 5002 5612 -552 1768 216 57 120 chr5 188182615 188183421 -11446729 + MER21B LTR ERV1 1 755 -108 1641 200 109 34 chr5 188183489 188184013 -11446137 + L1ME2 LINE L1 5606 6334 0 1747 123 51 25 chr5 188184070 188184385 -11445765 - AluSq SINE Alu 0 322 1 238 206 196 19 chr5 188184385 188184492 -11445658 + L1ME3 LINE L1 5458 5583 -583 827 94 123 41 chr5 188184492 188184662 -11445488 + MER21A LTR ERV1 1 184 -747 237 196 39 0 chr5 188184662 188184713 -11445437 + MER39 LTR ERV1 339 391 -316 2543 125 64 81 chr5 188184720 188184750 -11445400 + MER21A LTR ERV1 376 405 -526 1573 164 57 0 chr5 188184750 188185031 -11445119 + AluJb SINE Alu 9 305 -7 2543 125 64 81 chr5 188185031 188185566 -11444584 + MER21A LTR ERV1 405 931 0 1242 214 61 76 chr5 188185567 188186143 -11444007 + L1ME3 LINE L1 5583 6149 -13 214 344 111 11 chr5 188186922 188187111 -11443039 + L2 LINE L2 2555 2762 -552 227 305 86 55 chr5 188187148 188187176 -11442974 - MER102b DNA MER1_type -1087 341 315 1515 169 7 65 chr5 188187176 188187299 -11442851 + AluJo SINE Alu 12 141 -171 1491 176 16 62 chr5 188187299 188187606 -11442544 + AluJo SINE Alu 1 293 -19 1515 169 7 65 chr5 188187606 188187789 -11442361 + AluJo SINE Alu 141 300 -12 227 305 86 55 chr5 188187789 188187888 -11442262 - MER102b DNA MER1_type -1113 315 210 2155 137 16 0 chr5 188187948 188188254 -11441896 + AluSx SINE Alu 1 311 -1 2313 122 0 0 chr5 188188267 188188570 -11441580 + AluSx SINE Alu 1 303 -9 495 202 11 0 chr5 188188648 188188737 -11441413 + Charlie3 DNA MER1_type 1 90 -2620 927 225 64 4 chr5 188288758 188289186 -11340964 + MER68 LTR ERV1 42 538 -24 404 365 142 9 chr5 188289193 188289629 -11340521 + L2 LINE L2 2819 3312 -1 239 284 43 35 chr5 188289980 188290104 -11340046 - MIR SINE MIR -65 143 30 2019 128 31 0 chr5 188290222 188290512 -11339638 + AluJo SINE Alu 7 305 -7 656 266 23 17 chr5 188291612 188291785 -11338365 - MIR SINE MIR -51 211 38 576 305 50 18 chr5 188292060 188292339 -11337811 + L1ME LINE L1 5437 5724 -397 2068 147 7 0 chr5 188292445 188292745 -11337405 + AluSx SINE Alu 1 302 -10 878 171 0 0 chr5 188292745 188292874 -11337276 + AluSg/x SINE Alu 132 260 -50 2184 130 0 0 chr5 188292895 188293194 -11336956 - AluSx SINE Alu -13 299 1 1967 118 61 0 chr5 188293436 188293716 -11336434 - AluJo SINE Alu -15 297 1 268 274 120 17 chr5 188294425 188294542 -11335608 - L2 LINE L2 -5 3308 3180 340 225 90 18 chr5 188294808 188294919 -11335231 + MIR SINE MIR 93 211 -51 237 340 110 0 chr5 188295834 188295934 -11334216 + L2 LINE L2 3197 3307 -6 297 274 18 45 chr5 188296073 188296275 -11333875 + L1MC4a LINE L1 5686 5826 -507 2489 76 3 0 chr5 188296526 188296829 -11333321 - AluY SINE Alu -7 304 1 2411 83 3 7 chr5 188296857 188297158 -11332992 - AluSp SINE Alu -13 300 1 408 322 48 61 chr5 188297278 188297734 -11332416 + L1ME4a LINE L1 5484 5933 -188 2208 114 14 0 chr5 188297747 188298044 -11332106 + AluSp SINE Alu 3 303 -10 447 278 0 93 chr5 188298044 188298238 -11331912 - MIR SINE MIR -8 254 79 306 0 0 0 chr5 188298400 188298434 -11331716 + (TG)n Simple_repeat Simple_repeat 2 35 0 279 0 0 0 chr5 188298560 188298591 -11331559 + (TA)n Simple_repeat Simple_repeat 1 31 0 2776 33 0 3 chr5 188298591 188298897 -11331253 - AluY SINE Alu -6 305 1 239 310 56 28 chr5 188299273 188299415 -11330735 + MLT1K LTR MaLR 123 268 -320 484 293 154 0 chr5 188299750 188299938 -11330212 + MIR SINE MIR 12 228 -34 2404 102 0 9 chr5 188300181 188300496 -11329654 - AluSx SINE Alu 0 312 1 2241 116 3 0 chr5 188300700 188301003 -11329147 + AluSx SINE Alu 1 304 -8 2056 136 7 13 chr5 188301111 188301434 -11328716 + AluSx SINE Alu 1 312 0 2250 120 7 0 chr5 188301847 188302148 -11328002 + AluSg SINE Alu 1 303 -7 993 274 17 0 chr5 188302151 188302388 -11327762 - MIR SINE MIR -7 255 15 194 296 185 0 chr5 188302572 188302680 -11327470 - L2 LINE L2 -213 3059 2932 2416 83 0 3 chr5 188302714 188303016 -11327134 + AluSg SINE Alu 1 301 -9 253 225 0 28 chr5 188303038 188303109 -11327041 + LTR9 LTR ERV1 449 517 -95 222 346 84 20 chr5 188303340 188303542 -11326608 - L2 LINE L2 -405 2909 2695 566 191 0 9 chr5 188303552 188303662 -11326488 + FLAM_A SINE Alu 1 109 -33 2519 35 0 3 chr5 188303701 188304029 -11326121 + AluYa5 SINE Alu 1 327 0 410 311 0 15 chr5 188304651 188304783 -11325367 + MIR SINE MIR 24 153 -109 322 257 40 20 chr5 188305009 188305110 -11325040 - MIR SINE MIR -2 260 158 2402 100 0 7 chr5 188305153 188305462 -11324688 - AluSx SINE Alu -5 307 1 1071 171 23 0 chr5 188305465 188305641 -11324509 - AluJ SINE Alu -2 310 131 1218 87 6 12 chr5 188305656 188305817 -11324333 + AluSp SINE Alu 1 160 -153 207 0 0 0 chr5 188305842 188305865 -11324285 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 636 221 8 23 chr5 188305865 188305996 -11324154 - AluJ SINE Alu -172 130 2 2002 130 14 7 chr5 188306004 188306297 -11323853 - AluSg SINE Alu -15 295 1 1146 238 26 15 chr5 188306320 188306620 -11323530 - L1ME1 LINE L1 -6 6160 5857 2663 55 0 0 chr5 188306747 188307054 -11323096 - AluY SINE Alu -4 307 1 587 268 112 40 chr5 188307708 188307958 -11322192 + MLT1J LTR MaLR 32 299 -212 542 234 9 128 chr5 188307926 188308058 -11322092 + MLT1K LTR MaLR 321 416 -172 * 1926 148 3 7 chr5 188308058 188308356 -11321794 - AluJb SINE Alu -11 301 5 542 234 9 128 chr5 188308356 188308450 -11321700 + MLT1K LTR MaLR 416 520 -68 654 131 0 0 chr5 188308776 188308883 -11321267 + Ricksha DNA DNA 1 107 -1147 3912 168 45 34 chr5 188308907 188309512 -11320638 + Ricksha DNA DNA 2355 2939 -312 2292 118 0 0 chr5 188309512 188309816 -11320334 - AluSx SINE Alu -8 304 1 3912 168 45 34 chr5 188309816 188310120 -11320030 + Ricksha DNA DNA 2939 3238 -13 224 318 68 34 chr5 188310367 188310434 -11319716 + MIR SINE MIR 81 144 -118 2110 108 4 0 chr5 188310434 188310713 -11319437 + AluSx SINE Alu 21 300 -12 224 318 68 34 chr5 188310713 188310821 -11319329 + MIR SINE MIR 144 262 0 1409 117 0 24 chr5 188311123 188311329 -11318821 + AluSg/x SINE Alu 108 308 -4 243 278 124 0 chr5 188312057 188312154 -11317996 - MIR SINE MIR -72 136 28 183 226 283 0 chr5 188312152 188312258 -11317892 - L2 LINE L2 0 3272 3137 * 436 80 0 91 chr5 188312293 188312381 -11317769 + Alu SINE Alu 230 309 -2 2094 133 37 0 chr5 188312462 188312762 -11317388 - AluSq SINE Alu -2 311 1 352 273 41 8 chr5 188313129 188313250 -11316900 + MIR SINE MIR 29 153 -109 201 195 0 0 chr5 188313675 188313716 -11316434 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 267 246 220 8 chr5 188314251 188314369 -11315781 + MIR SINE MIR 65 207 -55 2167 131 0 0 chr5 188314380 188314685 -11315465 + AluSx SINE Alu 1 305 -7 440 272 69 28 chr5 188314751 188314969 -11315181 + MIR SINE MIR 25 249 -13 2553 53 7 3 chr5 188315164 188315465 -11314685 - AluY SINE Alu -9 302 1 1647 179 117 20 chr5 188315922 188316274 -11313876 + MSTD LTR MaLR 10 395 -1 34 0 0 0 chr5 188316454 188316488 -11313662 + AT_rich Low_complexity Low_complexity 1 34 0 236 329 178 16 chr5 188316903 188317207 -11312943 - L2 LINE L2 -10 3262 2910 183 80 0 0 chr5 188317322 188317347 -11312803 + (TG)n Simple_repeat Simple_repeat 2 26 0 202 385 34 8 chr5 188317358 188317475 -11312675 - L2 LINE L2 -565 2749 2630 244 304 214 42 chr5 188317554 188317955 -11312195 + MLT1K LTR MaLR 103 572 -16 778 211 80 0 chr5 188318043 188318218 -11311932 - MER5A DNA MER1_type 0 189 1 2028 172 15 10 chr5 188318657 188318758 -11311392 + L1M4 LINE L1 5098 5197 -987 1739 181 0 47 chr5 188318758 188319078 -11311072 + AluJb SINE Alu 1 305 -7 2028 172 15 10 chr5 188319078 188319362 -11310788 + L1M4 LINE L1 5197 5487 -697 2284 120 3 0 chr5 188319362 188319663 -11310487 + AluSx SINE Alu 1 302 -10 2028 172 15 10 chr5 188319663 188319853 -11310297 + L1M4 LINE L1 5487 5675 -509 2136 120 40 0 chr5 188319888 188320187 -11309963 + AluSx SINE Alu 1 311 -1 743 219 45 16 chr5 188320194 188320440 -11309710 + L1MB1 LINE L1 3252 3504 -2642 2269 74 3 7 chr5 188320446 188320756 -11309394 + AluY SINE Alu 1 309 0 1931 165 62 80 chr5 188320756 188320961 -11309189 - MER41C LTR ERV1 -113 441 234 1598 69 19 0 chr5 188320961 188321177 -11308973 - L1PA7 LINE L1 0 6154 5935 1931 165 62 80 chr5 188321177 188321420 -11308730 - MER41C LTR ERV1 -320 234 1 4398 198 19 86 chr5 188321424 188321730 -11308420 + L1MB1 LINE L1 3724 4049 -2097 2488 52 3 42 chr5 188321730 188322040 -11308110 + AluY SINE Alu 1 298 -13 4398 198 19 86 chr5 188322040 188322250 -11307900 + L1MB1 LINE L1 4049 4272 -1874 2377 102 0 7 chr5 188322250 188322554 -11307596 - AluSg SINE Alu -8 302 1 4398 198 19 86 chr5 188322554 188322863 -11307287 + L1MB1 LINE L1 4272 4600 -1546 2579 62 0 7 chr5 188322863 188323168 -11306982 + AluY SINE Alu 1 303 -8 4398 198 19 86 chr5 188323168 188323513 -11306637 + L1MB1 LINE L1 4600 4707 -1439 782 158 47 0 chr5 188323513 188323640 -11306510 + FLAM_C SINE Alu 1 133 0 4398 198 19 86 chr5 188323640 188323940 -11306210 + L1MB1 LINE L1 4707 5026 -1120 4912 161 10 29 chr5 188323944 188324547 -11305603 + L1MB1 LINE L1 5029 5600 -568 2384 112 0 0 chr5 188324547 188324859 -11305291 + AluSx SINE Alu 1 312 0 4912 161 10 29 chr5 188324859 188325417 -11304733 + L1MB1 LINE L1 5600 6167 -1 2141 112 6 34 chr5 188325427 188325748 -11304402 + AluJo SINE Alu 1 312 0 432 248 92 0 chr5 188326090 188326199 -11303951 - L2 LINE L2 -1 3312 3194 286 218 141 0 chr5 188326663 188326741 -11303409 - MIR SINE MIR -18 244 156 328 237 17 68 chr5 188326746 188326864 -11303286 + MIR SINE MIR 151 262 0 336 128 244 0 chr5 188326872 188326950 -11303200 - MIR SINE MIR -101 161 65 1685 139 4 4 chr5 188327266 188327525 -11302625 + AluSg SINE Alu 50 308 -2 238 312 28 28 chr5 188327708 188327817 -11302333 + MIR SINE MIR 38 146 -62 193 255 20 0 chr5 188327937 188327988 -11302162 + L2 LINE L2 3221 3272 0 545 315 91 5 chr5 188328161 188328358 -11301792 - MIR SINE MIR -15 247 34 223 284 60 0 chr5 188328373 188328440 -11301710 + MIR SINE MIR 78 148 -60 189 169 46 108 chr5 188328951 188329016 -11301134 - MIR3 SINE MIR -29 179 119 480 299 60 10 chr5 188329771 188329972 -11300178 + MIR SINE MIR 30 240 -22 307 214 99 121 chr5 188330203 188330385 -11299765 + L2 LINE L2 3136 3313 0 4345 159 72 31 chr5 188330888 188331516 -11298634 - MER21A LTR ERV1 0 931 255 2322 107 0 7 chr5 188331516 188331824 -11298326 - AluSg SINE Alu -4 306 1 4345 159 72 31 chr5 188331824 188332090 -11298060 - MER21A LTR ERV1 -676 255 1 200 349 46 0 chr5 188332288 188332397 -11297753 - MIR SINE MIR -109 153 40 287 293 89 67 chr5 188332894 188333036 -11297114 + MIR SINE MIR 13 163 -99 1595 165 99 0 chr5 188333036 188333309 -11296841 + AluSx SINE Alu 1 300 -12 287 293 89 67 chr5 188333309 188333391 -11296759 + MIR SINE MIR 163 242 -20 399 21 0 0 chr5 188333628 188333676 -11296474 + (TG)n Simple_repeat Simple_repeat 2 49 0 2581 77 0 3 chr5 188333896 188334208 -11295942 + AluSq SINE Alu 1 311 -2 391 245 61 37 chr5 188334213 188334331 -11295819 - MIR3 SINE MIR -37 171 46 2469 93 0 0 chr5 188334331 188334643 -11295507 + AluSq SINE Alu 1 312 -1 391 245 61 37 chr5 188334643 188334687 -11295463 - MIR3 SINE MIR -162 46 5 448 267 91 32 chr5 188335228 188335449 -11294701 - MIR SINE MIR -2 260 27 2399 87 3 13 chr5 188335464 188335776 -11294374 - AluSg SINE Alu -1 309 1 408 285 11 50 chr5 188335776 188335948 -11294202 + L2 LINE L2 3122 3288 -25 618 280 65 43 chr5 188335990 188336358 -11293792 + L2 LINE L2 2845 3220 -93 409 246 88 9 chr5 188336358 188336472 -11293678 - MER63 DNA MER1_type -56 780 32 400 248 50 0 chr5 188336668 188336789 -11293361 + Charlie5 DNA MER1_type 1 127 -2485 * 1775 148 23 51 chr5 188336786 188337137 -11293013 + Charlie5 DNA MER1_type 2234 2575 -49 2245 106 3 0 chr5 188337137 188337460 -11292690 + AluSp SINE Alu 1 324 0 1775 148 23 51 chr5 188337460 188337500 -11292650 + Charlie5 DNA MER1_type 2575 2615 -9 305 294 22 22 chr5 188337927 188338063 -11292087 + L2 LINE L2 2919 3054 -218 235 337 110 42 chr5 188338165 188338232 -11291918 + L2 LINE L2 2695 2756 -558 689 211 70 49 chr5 188338232 188338417 -11291733 - MER5A DNA MER1_type 0 189 1 235 337 110 42 chr5 188338417 188338613 -11291537 + L2 LINE L2 2756 2976 -338 662 254 94 10 chr5 188338881 188339082 -11291068 + MIR SINE MIR 44 261 -1 201 39 0 0 chr5 188339237 188339263 -11290887 + (TGGG)n Simple_repeat Simple_repeat 4 29 0 2241 118 0 0 chr5 188339349 188339646 -11290504 + AluSx SINE Alu 2 298 -14 198 0 0 0 chr5 188339719 188339741 -11290409 + (TAAAAA)n Simple_repeat Simple_repeat 3 24 0 2297 114 0 0 chr5 188339845 188340144 -11290006 + AluSx SINE Alu 1 299 -13 979 259 40 0 chr5 188340322 188340569 -11289581 - MIR SINE MIR -3 259 3 2238 107 3 0 chr5 188341409 188341699 -11288451 + AluSg SINE Alu 1 291 -19 2141 137 3 3 chr5 188341723 188342023 -11288127 - AluSx SINE Alu -12 300 1 3236 167 54 40 chr5 188342210 188342515 -11287635 + L1MB4 LINE L1 5447 5746 -434 2078 94 4 0 chr5 188342515 188342782 -11287368 + AluSx SINE Alu 38 305 -7 3236 167 54 40 chr5 188342782 188343200 -11286950 + L1MB4 LINE L1 5746 6180 0 1696 157 4 11 chr5 188343390 188343658 -11286492 + AluJo SINE Alu 1 266 -46 2034 147 6 6 chr5 188343672 188343985 -11286165 + AluSq SINE Alu 1 313 0 2472 95 0 0 chr5 188343988 188344292 -11285858 + AluSg SINE Alu 1 304 -6 2276 119 0 3 chr5 188344324 188344619 -11285531 + AluSx SINE Alu 1 294 -18 191 348 125 5 chr5 188345087 188345271 -11284879 - L2 LINE L2 -11 3261 3056 2397 99 0 3 chr5 188345302 188345605 -11284545 + AluSx SINE Alu 1 302 -10 246 277 169 20 chr5 188345814 188345962 -11284188 - MIR SINE MIR -51 211 42 2197 112 10 13 chr5 188346191 188346504 -11283646 + AluSx SINE Alu 1 312 0 218 171 0 0 chr5 188346699 188346734 -11283416 + CT-rich Low_complexity Low_complexity 2 36 0 454 271 86 41 chr5 188347263 188347484 -11282666 - MIR SINE MIR 0 262 32 387 224 24 12 chr5 188347977 188348062 -11282088 + MLT1K LTR MaLR 139 224 -364 2528 78 0 0 chr5 188348062 188348369 -11281781 + AluSq SINE Alu 1 307 -6 393 347 20 7 chr5 188348580 188348727 -11281423 - MIR SINE MIR -107 155 7 196 244 122 35 chr5 188348716 188348831 -11281319 + MIR3 SINE MIR 63 187 -21 * 1029 260 55 99 chr5 188349652 188349911 -11280239 + MLT1K LTR MaLR 22 248 -340 2485 70 3 10 chr5 188349911 188350225 -11279925 - AluSp SINE Alu -1 312 1 1029 260 55 99 chr5 188350225 188350492 -11279658 + MLT1K LTR MaLR 248 525 -63 535 324 117 54 chr5 188350784 188351012 -11279138 + L1MC4a LINE L1 5441 5600 -521 2278 118 3 0 chr5 188351012 188351317 -11278833 + AluSg SINE Alu 1 306 -4 535 324 117 54 chr5 188351317 188351550 -11278600 + L1MC4a LINE L1 5600 5817 -304 805 143 131 23 chr5 188351781 188351956 -11278194 - MER3 DNA MER1_type 0 209 16 353 296 43 17 chr5 188352755 188352925 -11277225 - MIR3 SINE MIR -53 155 12 272 248 10 0 chr5 188353586 188353687 -11276463 + (TGGA)n Simple_repeat Simple_repeat 2 103 0 273 277 60 0 chr5 188353982 188354065 -11276085 + MIR SINE MIR 46 133 -75 250 236 56 22 chr5 188355139 188355228 -11274922 - MIR SINE MIR -69 193 102 439 279 37 25 chr5 188355392 188355553 -11274597 + MIR SINE MIR 57 219 -43 1966 148 0 4 chr5 188355564 188355841 -11274309 + AluSx SINE Alu 1 276 -36 320 64 21 0 chr5 188355847 188355894 -11274256 + (AATAG)n Simple_repeat Simple_repeat 1 48 0 294 294 32 70 chr5 188355971 188356032 -11274118 - L1ME4a LINE L1 -195 5926 5864 2083 106 10 36 chr5 188356032 188356334 -11273816 + AluSq SINE Alu 1 294 -19 294 294 32 70 chr5 188356334 188356459 -11273691 - L1ME4a LINE L1 -257 5864 5747 385 270 45 9 chr5 188356680 188356791 -11273359 - MIR SINE MIR -93 169 55 2526 77 7 0 chr5 188356830 188357129 -11273021 + AluSx SINE Alu 1 301 -11 319 280 20 3 chr5 188358054 188358178 -11271972 - MIR SINE MIR -69 139 9 2319 96 0 7 chr5 188358289 188358590 -11271560 - AluSq SINE Alu 0 313 15 369 314 160 27 chr5 188358611 188358949 -11271201 - L2 LINE L2 -10 3303 2921 1295 163 4 44 chr5 188359127 188359379 -11270771 - AluJo SINE Alu 0 312 71 219 338 0 12 chr5 188359464 188359544 -11270606 + G-rich Low_complexity Low_complexity 27 105 0 473 260 33 9 chr5 188359904 188360086 -11270064 + MIR3 SINE MIR 15 204 -58 242 164 213 0 chr5 188360113 188360174 -11269976 + L2 LINE L2 3222 3295 -18 649 249 84 9 chr5 188360180 188360393 -11269757 - MIR SINE MIR -6 256 28 1599 165 60 57 chr5 188360883 188361025 -11269125 + MLT1A1 LTR MaLR 1 141 -224 1961 132 20 10 chr5 188361025 188361321 -11268829 + AluSx SINE Alu 1 299 -13 1599 165 60 57 chr5 188361321 188361530 -11268620 + MLT1A1 LTR MaLR 141 353 -12 743 238 100 0 chr5 188361636 188361918 -11268232 + MER33 DNA MER1_type 1 359 -4 2213 96 3 3 chr5 188361956 188362260 -11267890 - AluSx SINE Alu 0 304 1 363 287 9 0 chr5 188362266 188362381 -11267769 - Charlie8 DNA MER1_type -2258 159 44 353 275 62 38 chr5 188362687 188362877 -11267273 - MIR SINE MIR -62 146 10 847 212 37 28 chr5 188362947 188363164 -11266986 + MER20 DNA MER1_type 1 219 0 2368 85 0 3 chr5 188364314 188364607 -11265543 + AluSx SINE Alu 1 292 -20 2298 85 0 57 chr5 188364641 188364957 -11265193 + AluSx SINE Alu 1 298 -14 200 206 137 41 chr5 188365525 188365598 -11264552 + L2 LINE L2 3155 3234 -38 1908 111 0 4 chr5 188365609 188365870 -11264280 - AluSx SINE Alu -6 306 47 583 129 0 0 chr5 188365870 188365963 -11264187 + AluSg/x SINE Alu 208 300 -10 300 254 116 36 chr5 188366018 188366156 -11263994 + L1ME4a LINE L1 5968 6116 -5 2485 86 3 0 chr5 188366156 188366460 -11263690 + AluSg SINE Alu 1 305 -5 180 0 0 0 chr5 188366504 188366524 -11263626 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1158 164 0 35 chr5 188366535 188366683 -11263467 - AluJb SINE Alu -34 278 137 2236 116 0 3 chr5 188366683 188366984 -11263166 - AluSg SINE Alu -10 300 1 1158 164 0 35 chr5 188366984 188367036 -11263114 - AluJb SINE Alu -175 137 85 2089 153 0 0 chr5 188367059 188367367 -11262783 + AluJo SINE Alu 3 310 -2 1951 92 25 32 chr5 188367584 188367867 -11262283 - AluSx SINE Alu -9 303 23 189 288 34 0 chr5 188368512 188368571 -11261579 + MIR3 SINE MIR 9 69 -139 2154 117 0 28 chr5 188368776 188369093 -11261057 - AluSx SINE Alu -4 308 1 217 329 26 0 chr5 188369226 188369302 -11260848 + L3 LINE CR1 767 844 -733 2124 118 0 0 chr5 188369396 188369699 -11260451 - AluSc SINE Alu 0 303 1 2314 111 0 7 chr5 188370124 188370430 -11259720 + AluSx SINE Alu 1 304 -8 1887 163 7 0 chr5 188370474 188370781 -11259369 + AluJb SINE Alu 1 309 -3 389 265 179 31 chr5 188370805 188370967 -11259183 - MER5A DNA MER1_type 0 189 4 24 32 0 0 chr5 188372372 188372403 -11257747 + GC_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr5 188373163 188373198 -11256952 + AT_rich Low_complexity Low_complexity 1 35 0 811 154 4 21 chr5 188373929 188374170 -11255980 + GA-rich Low_complexity Low_complexity 1 236 0 1134 205 39 51 chr5 188374183 188374495 -11255655 + L1MB7 LINE L1 5866 6173 -11 1233 289 64 94 chr5 188374512 188374581 -11255569 + L1M4 LINE L1 3185 3255 -2891 2317 114 0 13 chr5 188374581 188374896 -11255254 + AluSx SINE Alu 1 311 -1 1233 289 64 94 chr5 188374896 188375144 -11255006 + L1M4 LINE L1 3255 3509 -2637 2223 127 0 9 chr5 188375144 188375459 -11254691 + AluSx SINE Alu 1 312 0 1233 289 64 94 chr5 188375459 188375646 -11254504 + L1M4 LINE L1 3509 3700 -2446 1827 156 14 0 chr5 188375646 188375929 -11254221 + AluJb SINE Alu 1 287 -25 1233 289 64 94 chr5 188375929 188375983 -11254167 + L1M4 LINE L1 3700 3754 -2392 2399 98 0 7 chr5 188375983 188376290 -11253860 - AluSc SINE Alu -4 305 1 1233 289 64 94 chr5 188376290 188376495 -11253655 + L1M4 LINE L1 3754 3928 -2218 425 159 0 0 chr5 188376499 188376568 -11253582 - LTR16C LTR ERVL -2 489 421 1799 164 47 0 chr5 188376601 188376899 -11253251 + AluJo SINE Alu 1 312 0 1501 172 3 101 chr5 188376910 188377041 -11253109 + AluJb SINE Alu 5 147 -165 2339 91 7 0 chr5 188377041 188377350 -11252800 + AluY SINE Alu 1 311 0 1501 172 3 101 chr5 188377350 188377544 -11252606 + AluJb SINE Alu 147 298 -14 2271 100 0 25 chr5 188377546 188377865 -11252285 + AluY SINE Alu 1 311 0 323 314 73 36 chr5 188377873 188378093 -11252057 - L1M4 LINE L1 -3037 3109 2882 2168 109 14 10 chr5 188378537 188378831 -11251319 - AluSx SINE Alu -17 295 1 503 251 73 55 chr5 188378926 188379145 -11251005 + MIR SINE MIR 40 262 0 440 0 36 0 chr5 188379286 188379341 -11250809 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 234 0 0 0 chr5 188379932 188379958 -11250192 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1970 87 17 77 chr5 188379960 188380258 -11249892 - AluSx SINE Alu -32 280 1 2176 97 38 0 chr5 188380518 188380808 -11249342 - AluSp SINE Alu -12 301 1 2433 85 3 0 chr5 188381241 188381535 -11248615 - AluSp SINE Alu -14 299 5 412 306 153 6 chr5 188381552 188381709 -11248441 + MER5A DNA MER1_type 4 183 -6 659 110 10 0 chr5 188381756 188381856 -11248294 - LTR12 LTR ERV1 -133 581 481 311 264 11 0 chr5 188381857 188381948 -11248202 - LTR30 LTR ERV1 -79 643 552 1507 101 20 60 chr5 188381948 188382239 -11247911 - LTR12 LTR ERV1 -406 2032 57 262 231 0 0 chr5 188382239 188382291 -11247859 - LTR30 LTR ERV1 -670 52 1 1677 168 0 0 chr5 188382359 188382615 -11247535 + AluJo SINE Alu 1 256 -56 21 0 0 0 chr5 188382615 188382636 -11247514 + AT_rich Low_complexity Low_complexity 1 21 0 2327 104 3 0 chr5 188382748 188383046 -11247104 - AluSg SINE Alu -11 299 1 186 306 93 46 chr5 188383212 188383320 -11246830 + L2 LINE L2 3116 3228 -44 2086 113 62 3 chr5 188384060 188384352 -11245798 - AluSx SINE Alu -3 309 1 2017 122 0 37 chr5 188385083 188385226 -11244924 + AluSx SINE Alu 1 148 -164 2088 141 7 0 chr5 188385226 188385530 -11244620 + AluSp SINE Alu 1 306 -7 2017 122 0 37 chr5 188385530 188385709 -11244441 + AluSx SINE Alu 148 312 0 780 146 0 0 chr5 188385860 188385983 -11244167 + FLAM_A SINE Alu 1 123 -10 330 61 0 222 chr5 188386139 188386191 -11243959 + MADE1 DNA Mariner 4 26 -54 2375 86 26 3 chr5 188386191 188386493 -11243657 + AluY SINE Alu 1 309 -2 330 61 0 222 chr5 188386493 188386539 -11243611 + MADE1 DNA Mariner 26 80 0 2206 126 0 0 chr5 188386559 188386852 -11243298 + AluSx SINE Alu 2 294 -18 2325 93 3 0 chr5 188386852 188387143 -11243007 + AluSg SINE Alu 1 292 -18 2001 120 39 3 chr5 188387602 188387886 -11242264 - AluSx SINE Alu -18 294 1 2278 99 0 3 chr5 188388292 188388585 -11241565 - AluSg SINE Alu -18 292 1 477 308 129 9 chr5 188388709 188388933 -11241217 - MIR SINE MIR -1 261 11 204 40 0 0 chr5 188389074 188389099 -11241051 + (A)n Simple_repeat Simple_repeat 1 25 0 844 153 0 0 chr5 188389838 188389962 -11240188 + AluJb SINE Alu 1 124 -188 2293 95 34 0 chr5 188390234 188390530 -11239620 - AluSq SINE Alu -7 306 1 328 110 44 165 chr5 188391165 188391256 -11238894 - MADE1 DNA Mariner 0 80 1 418 271 157 21 chr5 188391970 188392250 -11237900 + L1MC4a LINE L1 5254 5571 -2237 544 259 59 47 chr5 188392292 188392528 -11237622 + L1MC4a LINE L1 5668 5906 -1902 765 237 35 0 chr5 188392577 188392750 -11237400 + MER5A DNA MER1_type 2 180 -9 1424 188 4 8 chr5 188392916 188393177 -11236973 - AluJo SINE Alu -52 260 1 192 40 0 0 chr5 188393190 188393215 -11236935 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 2327 56 0 21 chr5 188393216 188393542 -11236608 + AluY SINE Alu 1 320 0 21 0 0 0 chr5 188393789 188393810 -11236340 + AT_rich Low_complexity Low_complexity 1 21 0 405 0 0 0 chr5 188395480 188395525 -11234625 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 22 56 0 0 chr5 188395561 188395597 -11234553 + AT_rich Low_complexity Low_complexity 1 36 0 2227 113 3 3 chr5 188396788 188397098 -11233052 - AluSq SINE Alu -3 310 1 2148 138 0 0 chr5 188397125 188397423 -11232727 - AluSx SINE Alu -14 298 1 728 113 0 10 chr5 188397758 188397855 -11232295 - FLAM_A SINE Alu -22 120 25 2360 92 7 0 chr5 188397913 188398217 -11231933 - AluSp SINE Alu -7 306 1 6247 141 124 91 chr5 188398970 188400049 -11230101 + L1MCa LINE L1 19 1061 -5365 1986 85 11 11 chr5 188400049 188400320 -11229830 + AluSq SINE Alu 36 306 -7 6247 141 124 91 chr5 188400320 188400603 -11229547 + L1MCa LINE L1 1061 1333 -5093 832 184 0 22 chr5 188400603 188400739 -11229411 + FLAM_C SINE Alu 1 133 0 6247 141 124 91 chr5 188400739 188400807 -11229343 + L1MCa LINE L1 1333 1397 -5029 1788 155 3 34 chr5 188400807 188401104 -11229046 + AluJb SINE Alu 1 288 -24 6247 141 124 91 chr5 188401104 188401262 -11228888 + L1MCa LINE L1 1397 1667 -4759 2174 113 0 25 chr5 188401262 188401581 -11228569 + AluY SINE Alu 1 311 0 6247 141 124 91 chr5 188401581 188401614 -11228536 + L1MCa LINE L1 1667 1697 -4729 1479 177 37 30 chr5 188401614 188401914 -11228236 - AluJo SINE Alu -8 304 3 7410 205 58 30 chr5 188401914 188402633 -11227517 + L1M4 LINE L1 2423 3121 -3025 1627 171 33 10 chr5 188402633 188402938 -11227212 + AluJo SINE Alu 1 312 0 7410 205 58 30 chr5 188402938 188403397 -11226753 + L1M4 LINE L1 3121 3566 -2580 3938 181 54 20 chr5 188403397 188404106 -11226044 + MER44D DNA MER2_type 1 605 0 7410 205 58 30 chr5 188404106 188404486 -11225664 + L1M4 LINE L1 3566 3934 -2212 2020 115 40 0 chr5 188404486 188404782 -11225368 + AluSp SINE Alu 1 308 -5 7410 205 58 30 chr5 188404782 188405348 -11224802 + L1M4 LINE L1 3934 4608 -1538 1635 190 13 7 chr5 188405354 188405654 -11224496 + AluJo SINE Alu 1 302 -10 3218 130 10 18 chr5 188405655 188406161 -11223989 + L1MC1 LINE L1 5820 6321 -12 212 304 72 14 chr5 188407015 188407084 -11223066 - L2 LINE L2 -16 3256 3184 2293 75 54 0 chr5 188407455 188407749 -11222401 + AluSg SINE Alu 1 310 0 670 207 86 11 chr5 188407752 188407926 -11222224 - MIR SINE MIR -11 251 65 2027 151 26 64 chr5 188408263 188408420 -11221730 + THE1C LTR MaLR 1 163 -212 2000 145 30 0 chr5 188408420 188408723 -11221427 - AluSx SINE Alu 0 312 1 2027 151 26 64 chr5 188408723 188408955 -11221195 + THE1C LTR MaLR 163 375 0 313 182 141 10 chr5 188409776 188409875 -11220275 + L1ME1 LINE L1 6034 6145 -21 1192 143 0 6 chr5 188410066 188410248 -11219902 - AluSg/x SINE Alu -8 304 124 322 279 18 18 chr5 188410535 188410646 -11219504 + MIR SINE MIR 148 258 -4 1041 106 0 0 chr5 188411683 188411815 -11218335 - AluY SINE Alu -179 132 1 2147 77 84 3 chr5 188411825 188412111 -11218039 - AluSg SINE Alu -1 309 1 213 312 13 65 chr5 188412364 188412441 -11217709 - MIR SINE MIR -92 116 44 * 339 275 148 27 chr5 188412414 188412563 -11217587 + MIR SINE MIR 34 200 -62 2313 107 0 0 chr5 188412575 188412883 -11217267 + AluSx SINE Alu 5 312 0 27 0 0 0 chr5 188412996 188413023 -11217127 + AT_rich Low_complexity Low_complexity 1 27 0 2724 36 0 3 chr5 188413351 188413658 -11216492 + AluY SINE Alu 1 306 -5 350 151 0 0 chr5 188414420 188414473 -11215677 + AluSp/q SINE Alu 244 296 -7 665 254 20 55 chr5 188414573 188414787 -11215363 - MIR SINE MIR -7 255 53 2492 84 0 0 chr5 188414906 188415215 -11214935 - AluY SINE Alu -2 309 1 2143 127 0 25 chr5 188416121 188416436 -11213714 + AluSx SINE Alu 1 307 -5 1490 188 50 7 chr5 188416711 188416830 -11213320 + AluJb SINE Alu 1 113 -199 245 27 54 0 chr5 188416830 188416867 -11213283 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1490 188 50 7 chr5 188416867 188417024 -11213126 + AluJb SINE Alu 113 289 -23 1604 100 116 12 chr5 188417027 188417278 -11212872 + AluSx SINE Alu 36 312 0 21 36 0 0 chr5 188418026 188418054 -11212096 + AT_rich Low_complexity Low_complexity 1 28 0 1894 157 7 7 chr5 188418756 188419056 -11211094 + AluJb SINE Alu 1 300 -12 913 136 0 36 chr5 188419080 188419220 -11210930 + L1MC1 LINE L1 6182 6316 -17 235 260 0 0 chr5 188420426 188420476 -11209674 - MIR SINE MIR -121 87 38 186 194 0 0 chr5 188420470 188420506 -11209644 - L2 LINE L2 -1 3312 3277 * 2203 89 4 4 chr5 188421243 188421524 -11208626 - AluSc SINE Alu -28 281 1 203 292 45 22 chr5 188421859 188421948 -11208202 + MIR SINE MIR 167 257 -5 215 125 25 0 chr5 188423153 188423193 -11206957 + (CATA)n Simple_repeat Simple_repeat 3 43 0 220 197 121 0 chr5 188423300 188423366 -11206784 - MIR3 SINE MIR -15 193 120 2022 83 0 76 chr5 188423439 188423558 -11206592 + AluSx SINE Alu 3 129 -177 2283 102 0 0 chr5 188423558 188423853 -11206297 - AluSp SINE Alu -18 295 1 2022 83 0 76 chr5 188423853 188424060 -11206090 + AluSx SINE Alu 129 306 0 22 35 0 0 chr5 188424492 188424521 -11205629 + AT_rich Low_complexity Low_complexity 1 29 0 780 209 0 0 chr5 188424936 188425065 -11205085 + FLAM_C SINE Alu 1 129 -14 2217 106 17 7 chr5 188425264 188425566 -11204584 + AluSq SINE Alu 1 305 -8 1641 182 4 14 chr5 188425865 188426145 -11204005 + AluJb SINE Alu 1 277 -35 1458 162 55 12 chr5 188426164 188426417 -11203733 + MSTB LTR MaLR 163 426 0 23 0 0 0 chr5 188426442 188426465 -11203685 + AT_rich Low_complexity Low_complexity 1 23 0 383 233 0 0 chr5 188426567 188426640 -11203510 + MER20 DNA MER1_type 1 73 -146 285 231 0 15 chr5 188426640 188426705 -11203445 - L1MC5 LINE L1 -586 7375 7312 598 269 169 11 chr5 188426770 188427119 -11203031 - L1MC4 LINE L1 -662 7380 6977 869 144 0 0 chr5 188427135 188427260 -11202890 - FLAM_C SINE Alu -18 125 1 24 0 0 0 chr5 188427260 188427284 -11202866 + AT_rich Low_complexity Low_complexity 1 24 0 793 196 107 77 chr5 188427425 188427687 -11202463 + MLT1A1 LTR MaLR 2 294 -71 2190 73 0 7 chr5 188427687 188427959 -11202191 - AluSq SINE Alu -7 306 37 793 196 107 77 chr5 188427959 188428008 -11202142 + MLT1A1 LTR MaLR 294 340 -25 329 257 0 0 chr5 188428040 188428114 -11202036 + MLT-int LTR MaLR 668 741 -994 2375 93 0 3 chr5 188428428 188428730 -11201420 - AluSp SINE Alu -12 301 1 2327 91 3 3 chr5 188428854 188429161 -11200989 - AluSq SINE Alu -6 307 1 352 326 7 22 chr5 188429438 188429576 -11200574 + L1ME LINE L1 781 916 -5614 1725 150 4 0 chr5 188429600 188429866 -11200284 + AluSx SINE Alu 38 304 -8 1031 230 32 85 chr5 188429933 188430368 -11199782 + L1ME LINE L1 926 1337 -5206 703 206 98 100 chr5 188430388 188430574 -11199576 + L1ME LINE L1 2397 2582 -3958 2247 109 7 0 chr5 188430574 188430876 -11199274 - AluSx SINE Alu -8 304 1 2167 119 26 0 chr5 188430884 188431186 -11198964 - AluSg SINE Alu 0 310 1 703 206 98 100 chr5 188431186 188431500 -11198650 + L1ME LINE L1 2589 2908 -3632 702 195 114 13 chr5 188431503 188431652 -11198498 + FRAM SINE Alu 1 164 -2 2482 228 72 11 chr5 188431663 188432423 -11197727 + L1ME LINE L1 2706 3512 -3028 2222 113 0 0 chr5 188432440 188432732 -11197418 + AluSg SINE Alu 1 292 -18 1030 187 0 0 chr5 188432738 188432909 -11197241 + AluSg/x SINE Alu 127 297 -15 873 200 7 0 chr5 188432914 188433069 -11197081 + AluJb SINE Alu 126 281 -31 227 219 287 6 chr5 188433080 188433244 -11196906 + L1ME LINE L1 3527 3736 -2804 2481 87 0 3 chr5 188433248 188433560 -11196590 + AluSx SINE Alu 1 311 -1 810 174 106 198 chr5 188433561 188433708 -11196442 + L1ME LINE L1 3967 4126 -2414 403 226 108 21 chr5 188433708 188433801 -11196349 + FLAM_A SINE Alu 2 102 -40 810 174 106 198 chr5 188433801 188434111 -11196039 + L1ME LINE L1 4126 4465 -2075 1857 97 0 35 chr5 188434111 188434391 -11195759 + AluSq SINE Alu 39 309 0 1766 183 174 11 chr5 188434391 188434867 -11195283 + L1MC4 LINE L1 7264 7817 -225 1615 102 4 9 chr5 188434867 188435092 -11195058 + AluJb SINE Alu 85 308 -4 2181 77 17 20 chr5 188435165 188435464 -11194686 + AluY SINE Alu 1 298 -13 1510 209 49 51 chr5 188435517 188435990 -11194160 + L1M1 LINE L1 2620 3091 -4474 415 271 28 0 chr5 188436069 188436176 -11193974 + MIR SINE MIR 142 251 -11 291 216 88 59 chr5 188436186 188436288 -11193862 - MIR SINE MIR -150 112 8 946 199 11 0 chr5 188437164 188437340 -11192810 - AluJo SINE Alu -14 298 121 2092 126 0 0 chr5 188437590 188437884 -11192266 - AluSc SINE Alu -15 294 1 22 35 0 0 chr5 188437900 188437929 -11192221 + AT_rich Low_complexity Low_complexity 1 29 0 2469 64 3 0 chr5 188438233 188438529 -11191621 - AluSg SINE Alu -13 297 1 2451 93 0 0 chr5 188439939 188440251 -11189899 + AluSq SINE Alu 1 312 -1 959 187 76 5 chr5 188440519 188440717 -11189433 - AluJb SINE Alu -17 295 84 2203 101 10 0 chr5 188440771 188441059 -11189091 + AluSq SINE Alu 1 291 -22 6510 165 45 23 chr5 188441112 188443274 -11186876 - L1PA15 LINE L1 0 6165 3956 2169 104 0 0 chr5 188443274 188443573 -11186577 - AluSg SINE Alu -11 299 1 240 172 17 35 chr5 188443688 188443746 -11186404 + (TATG)n Simple_repeat Simple_repeat 4 60 0 1592 162 32 6 chr5 188443996 188444365 -11185785 - L1MB7 LINE L1 -336 5830 5323 2062 131 0 0 chr5 188444365 188444662 -11185488 - AluSx SINE Alu -15 297 1 1050 152 0 0 chr5 188444671 188444682 -11185468 - AluSg/x SINE Alu -19 291 281 216 0 0 0 chr5 188444682 188444706 -11185444 + (TG)n Simple_repeat Simple_repeat 1 24 0 1050 152 0 0 chr5 188444706 188444859 -11185291 - AluSg/x SINE Alu -28 282 127 401 189 0 14 chr5 188444859 188444933 -11185217 - AluJ/FRAM SINE Alu -15 297 225 314 163 2 0 chr5 188445048 188445127 -11185023 - L1MB7 LINE L1 -1104 5042 4963 21 0 0 0 chr5 188445145 188445166 -11184984 + AT_rich Low_complexity Low_complexity 1 21 0 705 205 0 0 chr5 188445176 188445293 -11184857 - FLAM_C SINE Alu -25 118 2 1087 184 10 88 chr5 188445294 188445411 -11184739 - L1MB7 LINE L1 -1154 4992 4867 2086 122 3 0 chr5 188445411 188445707 -11184443 - AluSq SINE Alu -16 297 1 1087 184 10 88 chr5 188445707 188445883 -11184267 - L1MB7 LINE L1 -1279 4867 4722 1417 80 24 100 chr5 188446010 188446200 -11183950 - L1PA14 LINE L1 -9 6152 5984 2192 94 13 3 chr5 188446200 188446507 -11183643 - AluSx SINE Alu -2 310 1 1417 80 24 100 chr5 188446507 188446567 -11183583 - L1PA14 LINE L1 -177 5984 5921 232 30 0 0 chr5 188446616 188446649 -11183501 - AluSp SINE Alu -11 292 260 1465 108 9 9 chr5 188446654 188446734 -11183416 - AluSp SINE Alu -97 216 137 2218 81 0 39 chr5 188446734 188447043 -11183107 - AluSg SINE Alu -13 297 1 1465 108 9 9 chr5 188447043 188447176 -11182974 - AluSp SINE Alu -175 138 3 1831 244 40 81 chr5 188447247 188447952 -11182198 - LTR41 LTR ERVL -97 676 1 772 235 176 75 chr5 188448111 188448469 -11181681 - MER57B LTR ERV1 -9 394 1 965 251 33 66 chr5 188448469 188448704 -11181446 - MER31-int LTR ERV1 -393 7144 6924 2244 104 0 0 chr5 188448704 188449013 -11181137 + AluSq SINE Alu 5 313 0 965 251 33 66 chr5 188449013 188449140 -11181010 - MER31-int LTR ERV1 -613 6924 6794 2061 85 37 0 chr5 188449468 188449762 -11180388 + AluSx SINE Alu 1 305 -7 662 211 0 8 chr5 188449771 188449894 -11180256 - FLAM_A SINE Alu -8 125 4 2245 112 0 0 chr5 188450049 188450361 -11179789 - AluSx SINE Alu 0 312 1 673 228 21 7 chr5 188450718 188450863 -11179287 - MER31-int LTR ERV1 -1358 6179 6033 490 257 5 126 chr5 188451253 188451475 -11178675 - MER31-int LTR ERV1 -1479 6058 5864 2315 100 0 0 chr5 188451492 188451801 -11178349 - AluSg SINE Alu -1 309 1 1213 274 44 86 chr5 188451821 188451948 -11178202 - MER31-int LTR ERV1 -1716 5821 5690 2152 103 3 13 chr5 188451948 188452260 -11177890 - AluSx SINE Alu -3 309 1 1213 274 44 86 chr5 188452260 188452888 -11177262 - MER31-int LTR ERV1 -1847 5690 5037 2038 92 34 0 chr5 188452888 188453180 -11176970 + AluSq SINE Alu 1 302 -11 1696 153 7 53 chr5 188453188 188453489 -11176661 - AluJb SINE Alu -25 287 1 1213 274 44 86 chr5 188453489 188453609 -11176541 - MER31-int LTR ERV1 -2507 5030 2090 * 1759 195 71 56 chr5 188453603 188454212 -11175938 - MER31-int LTR ERV1 -1696 3240 2623 692 381 12 105 chr5 188454322 188454362 -11175788 - MER31-int LTR ERV1 -2343 2593 2551 1549 183 21 0 chr5 188454362 188454652 -11175498 + AluJo SINE Alu 1 296 -16 692 381 12 105 chr5 188454652 188455010 -11175140 - MER31-int LTR ERV1 -2385 2551 2232 5409 21 2 2 chr5 188455010 188455628 -11174522 + L1PA3 LINE L1 5363 5980 -175 613 143 0 0 chr5 188455628 188455719 -11174431 - AluS SINE Alu -221 92 2 1796 125 30 30 chr5 188455722 188456026 -11174124 - AluSx SINE Alu -5 307 4 620 165 9 9 chr5 188456030 188456139 -11174011 + MER21B LTR ERV1 463 571 -292 1894 147 3 0 chr5 188456139 188456438 -11173712 - AluSx SINE Alu -12 300 1 1240 230 137 16 chr5 188456477 188456864 -11173286 - MER57B LTR ERV1 0 434 1 526 335 39 39 chr5 188456944 188457204 -11172946 + L1MC4a LINE L1 3100 3359 -2787 2047 154 22 25 chr5 188457210 188457444 -11172706 - MLT1A1 LTR MaLR -2 363 129 2402 104 93 36 chr5 188457444 188457865 -11172285 + MER65A LTR ERV1 1 445 0 2047 154 22 25 chr5 188457865 188457994 -11172156 - MLT1A1 LTR MaLR -236 129 1 365 324 85 39 chr5 188457995 188458254 -11171896 + L1MC4a LINE L1 3357 3627 -2519 267 180 0 20 chr5 188458354 188458371 -11171779 + AluSp SINE Alu 120 135 -168 277 171 0 0 chr5 188458371 188458412 -11171738 + Alu SINE Alu 1 41 -259 1406 130 0 0 chr5 188458515 188458730 -11171420 + AluSq SINE Alu 97 311 -2 233 29 29 0 chr5 188458751 188458785 -11171365 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 601 292 93 23 chr5 188458787 188459305 -11170845 + L1MC4a LINE L1 3922 4471 -1675 508 152 0 0 chr5 188459323 188459402 -11170748 + FLAM_A SINE Alu 12 90 -52 2126 116 0 3 chr5 188459582 188459883 -11170267 - AluSq SINE Alu -13 300 1 497 238 74 58 chr5 188459888 188460412 -11169738 + L1MC4a LINE L1 4901 5438 -746 1151 159 5 0 chr5 188460444 188460645 -11169505 + L1MB7 LINE L1 4848 5049 -1097 * 1366 143 53 85 chr5 188460642 188460756 -11169394 + L1MB7 LINE L1 5854 5970 -214 1748 162 6 13 chr5 188460756 188461093 -11169057 + AluSq SINE Alu 1 313 0 1366 143 53 85 chr5 188461093 188461227 -11168923 + L1MB7 LINE L1 5970 6091 -93 2060 121 3 3 chr5 188461227 188461532 -11168618 + AluSx SINE Alu 1 305 -7 1366 143 53 85 chr5 188461532 188461624 -11168526 + L1MB7 LINE L1 6091 6184 0 * 2137 203 101 74 chr5 188461621 188461881 -11168269 + L1MC4a LINE L1 5425 5677 -2131 1666 152 21 3 chr5 188461881 188462170 -11167980 + AluJo SINE Alu 1 294 -18 2137 203 101 74 chr5 188462170 188462557 -11167593 + L1MC4a LINE L1 5677 6095 -1713 1999 120 3 7 chr5 188462557 188462858 -11167292 - AluSx SINE Alu -12 300 1 2137 203 101 74 chr5 188462858 188462935 -11167215 + L1MC4a LINE L1 6095 6169 -1639 1226 302 9 108 chr5 188462940 188463274 -11166876 + AluJb SINE Alu 1 301 -1 1315 269 26 34 chr5 188463275 188463960 -11166190 + L1MC4a LINE L1 7114 7919 -123 1925 102 3 65 chr5 188463960 188464282 -11165868 + AluSx SINE Alu 1 302 -10 1315 269 26 34 chr5 188464282 188464317 -11165833 + L1MC4a LINE L1 7919 7953 -89 355 214 24 24 chr5 188464587 188464671 -11165479 - MLT1H LTR MaLR -374 175 92 521 281 59 53 chr5 188464676 188465017 -11165133 + L1MC4a LINE L1 6209 6551 -1257 2349 82 0 0 chr5 188465545 188465849 -11164301 - AluSx SINE Alu -8 304 1 569 298 52 32 chr5 188466159 188466407 -11163743 + MLT1K LTR MaLR 11 263 -325 2062 82 4 0 chr5 188466463 188466732 -11163418 - AluSx SINE Alu -7 305 36 1409 195 50 0 chr5 188466735 188466892 -11163258 - AluJb SINE Alu -21 291 113 245 27 54 0 chr5 188466892 188466929 -11163221 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1409 195 50 0 chr5 188466929 188467048 -11163102 - AluJb SINE Alu -199 113 1 273 213 123 57 chr5 188467388 188467510 -11162640 + MLT1K LTR MaLR 433 562 -26 1984 126 10 3 chr5 188467602 188467904 -11162246 + AluSx SINE Alu 1 304 -8 883 47 0 0 chr5 188468021 188468127 -11162023 + AluY SINE Alu 195 300 -11 4190 89 12 6 chr5 188468632 188469201 -11160949 + MER41A LTR ERV1 1 557 0 3103 111 7 0 chr5 188469368 188469799 -11160351 + MER57B LTR ERV1 1 434 0 2024 109 3 0 chr5 188469828 188470113 -11160037 - AluSp SINE Alu -26 287 2 2444 52 0 3 chr5 188470142 188470450 -11159700 + AluY SINE Alu 1 307 -4 1620 296 81 27 chr5 188470478 188470743 -11159407 - MLT1K LTR MaLR 0 588 339 1957 88 3 42 chr5 188470743 188471050 -11159100 + AluSq SINE Alu 1 295 -18 1620 296 81 27 chr5 188471050 188471341 -11158809 - MLT1K LTR MaLR -249 339 2 400 250 40 16 chr5 188471469 188471593 -11158557 - MIR SINE MIR 0 262 136 2131 116 0 0 chr5 188471683 188471984 -11158166 + AluSq SINE Alu 1 301 -12 293 363 96 6 chr5 188472036 188472193 -11157957 - L2 LINE L2 0 3272 3102 25 0 0 0 chr5 188472211 188472236 -11157914 + AT_rich Low_complexity Low_complexity 1 25 0 2191 85 0 10 chr5 188472240 188472534 -11157616 - AluSg SINE Alu -19 291 1 1112 269 43 41 chr5 188472976 188473419 -11156731 - MER113 DNA MER1_type? -77 444 1 1932 99 3 78 chr5 188473745 188474067 -11156083 - AluSq SINE Alu -15 298 1 1253 161 41 0 chr5 188474069 188474287 -11155863 - AluJb SINE Alu -22 290 64 2341 62 7 13 chr5 188474313 188474621 -11155529 - AluY SINE Alu -5 306 1 1701 100 32 16 chr5 188474628 188474877 -11155273 - L1PA10 LINE L1 -11 6157 5905 218 160 20 0 chr5 188475635 188475685 -11154465 + CT-rich Low_complexity Low_complexity 2 52 0 269 216 43 31 chr5 188475753 188475915 -11154235 + (TTGTG)n Simple_repeat Simple_repeat 3 166 0 811 180 53 0 chr5 188475957 188476107 -11154043 - FRAM SINE Alu -6 160 3 395 173 0 0 chr5 188476245 188476326 -11153824 + L1PB4 LINE L1 6073 6153 -3 405 102 0 0 chr5 188476683 188476742 -11153408 + (TG)n Simple_repeat Simple_repeat 1 59 0 2242 106 0 0 chr5 188476824 188477136 -11153014 - AluSx SINE Alu 0 312 1 1117 153 17 0 chr5 188477308 188477484 -11152666 - MSTD LTR MaLR 0 396 218 1893 118 14 7 chr5 188477516 188477795 -11152355 + MSTA LTR MaLR 133 413 -15 2224 133 48 24 chr5 188477795 188477991 -11152159 + L1MB3 LINE L1 5761 5951 -232 2208 102 3 0 chr5 188477991 188478295 -11151855 + AluSq SINE Alu 1 305 -8 2224 133 48 24 chr5 188478295 188478511 -11151639 + L1MB3 LINE L1 5951 6183 0 970 195 106 114 chr5 188478747 188479057 -11151093 - MSTD LTR MaLR -3 393 84 2074 79 3 21 chr5 188479057 188479381 -11150769 - AluSp SINE Alu 0 319 1 970 195 106 114 chr5 188479381 188479464 -11150686 - MSTD LTR MaLR -312 84 2 323 256 55 61 chr5 188479660 188479824 -11150326 + MER103 DNA DNA 3 165 -1 574 188 20 0 chr5 188480025 188480126 -11150024 + MER58 DNA MER1_type 2318 2420 0 2273 80 0 10 chr5 188480152 188480454 -11149696 - AluSx SINE Alu -13 299 1 397 257 283 27 chr5 188480494 188480681 -11149469 - MIR SINE MIR 0 262 28 288 266 0 0 chr5 188480697 188480761 -11149389 + Charlie7 DNA MER1_type 1 64 -2548 1313 187 7 81 chr5 188480890 188481047 -11149103 - AluJo SINE Alu -17 295 128 2197 116 0 0 chr5 188481047 188481349 -11148801 - AluSx SINE Alu -10 302 1 1313 187 7 81 chr5 188481349 188481413 -11148737 - AluJo SINE Alu -184 128 101 1955 88 74 28 chr5 188481413 188481698 -11148452 - AluSg SINE Alu -12 298 1 1313 187 7 81 chr5 188481698 188481785 -11148365 - AluJo SINE Alu -211 101 9 251 226 21 21 chr5 188482282 188482375 -11147775 + L1MC4 LINE L1 6611 6703 -1339 2069 123 0 10 chr5 188482378 188482678 -11147472 - AluSx SINE Alu -15 297 1 2461 62 0 0 chr5 188482825 188483131 -11147019 - AluY SINE Alu -5 306 1 928 216 48 9 chr5 188483302 188483529 -11146621 - MER46A DNA MER2_type 0 236 1 290 207 136 86 chr5 188483771 188483911 -11146239 - MER103 DNA DNA -5 161 15 432 293 107 18 chr5 188483976 188484202 -11145948 + MIR SINE MIR 12 254 -8 2127 105 3 3 chr5 188484207 188484512 -11145638 + AluSx SINE Alu 1 305 -7 301 306 20 20 chr5 188484647 188484745 -11145405 + MER5A DNA MER1_type 92 189 0 2095 116 20 0 chr5 188484964 188485267 -11144883 + AluSq SINE Alu 1 309 -4 1736 154 6 32 chr5 188485540 188485851 -11144299 - AluJo SINE Alu -4 308 6 2253 78 3 0 chr5 188486231 188486527 -11143623 - AluSx SINE Alu -13 299 3 24 0 0 0 chr5 188486824 188486848 -11143302 + AT_rich Low_complexity Low_complexity 1 24 0 251 291 213 0 chr5 188488742 188488869 -11141281 + MIR SINE MIR 39 192 -70 239 111 0 22 chr5 188489977 188490022 -11140128 + (CAGGG)n Simple_repeat Simple_repeat 3 46 0 338 284 257 11 chr5 188490621 188490804 -11139346 + MIR SINE MIR 21 248 -14 260 340 31 0 chr5 188692306 188692403 -10937747 + L2 LINE L2 3201 3300 -13 593 271 98 33 chr5 188692404 188692648 -10937502 - MIR SINE MIR -1 261 2 518 211 189 8 chr5 188692867 188693127 -10937023 - L1ME4a LINE L1 -2 6119 5813 1958 138 191 6 chr5 188693156 188693517 -10936633 - MSTA LTR MaLR 0 428 1 277 216 134 10 chr5 188693522 188693619 -10936531 - L1ME4a LINE L1 -23 6098 5990 273 261 91 0 chr5 188693886 188693974 -10936176 - Charlie8 DNA MER1_type -2203 214 119 390 287 110 0 chr5 188694286 188694422 -10935728 - L2 LINE L2 -1 3271 3121 2237 91 0 3 chr5 188694569 188694865 -10935285 + AluSq SINE Alu 1 295 -18 268 295 39 0 chr5 188694931 188695009 -10935141 - L2 LINE L2 -24 3289 3209 778 240 26 60 chr5 188695019 188695252 -10934898 + MIR SINE MIR 8 232 -30 278 282 0 14 chr5 188695362 188695433 -10934717 + GA-rich Low_complexity Low_complexity 2 71 0 24 67 0 0 chr5 188695844 188695889 -10934261 + GC_rich Low_complexity Low_complexity 1 45 0 274 235 12 24 chr5 188696441 188696526 -10933624 + (CCCCG)n Simple_repeat Simple_repeat 5 88 0 563 231 15 0 chr5 188696581 188696711 -10933439 - MER5A DNA MER1_type -57 132 1 186 239 97 71 chr5 188696953 188697066 -10933084 - L2 LINE L2 -1 3312 3197 377 269 81 19 chr5 188697422 188697582 -10932568 - MIR SINE MIR -73 189 20 355 246 131 0 chr5 188697546 188697668 -10932482 + MIR SINE MIR 92 229 -33 * 1140 255 129 11 chr5 188697975 188698355 -10931795 - MLT1K LTR MaLR -2 586 162 254 214 14 14 chr5 188699693 188699763 -10930387 + GA-rich Low_complexity Low_complexity 1 70 0 342 267 91 30 chr5 188701848 188702013 -10928137 - MER104 DNA Tc2 0 180 6 395 279 47 8 chr5 188702014 188702143 -10928007 - MIR SINE MIR -107 155 22 221 290 32 0 chr5 188702820 188702882 -10927268 + L2 LINE L2 3204 3267 -5 202 283 0 0 chr5 188702947 188702993 -10927157 - L2 LINE L2 -8 3264 3219 360 278 65 78 chr5 188704014 188704259 -10925891 + L1ME4a LINE L1 5520 5761 -360 564 267 139 12 chr5 188704259 188704653 -10925497 - MLT1K LTR MaLR 0 588 88 1743 129 8 4 chr5 188704693 188704956 -10925194 + AluSg SINE Alu 47 310 0 470 320 14 0 chr5 188705074 188705221 -10924929 + MIR SINE MIR 87 235 -27 335 339 7 53 chr5 188705236 188705519 -10924631 + L1ME4a LINE L1 5836 6105 -16 2269 86 3 3 chr5 188706241 188706543 -10923607 + AluSq SINE Alu 1 302 -11 835 291 122 28 chr5 188706548 188706902 -10923248 - MLT1K LTR MaLR -2 586 200 360 303 125 7 chr5 188707312 188707464 -10922686 - MIR SINE MIR 0 262 93 195 276 66 0 chr5 188707630 188707706 -10922444 - MIR SINE MIR -146 116 36 230 289 0 0 chr5 188707744 188707796 -10922354 + polypurine Low_complexity Low_complexity 3 54 0 311 264 0 0 chr5 188708575 188708647 -10921503 + MIR SINE MIR 81 152 -56 180 0 0 0 chr5 188710388 188710408 -10919742 + (CTGGGG)n Simple_repeat Simple_repeat 2 21 0 2036 109 31 0 chr5 188710700 188710993 -10919157 + AluSx SINE Alu 1 302 -10 240 214 113 98 chr5 188711298 188711564 -10918586 + L1ME4a LINE L1 5850 6119 -2 2078 119 3 0 chr5 188711652 188711954 -10918196 + AluSq SINE Alu 1 303 -10 308 291 70 63 chr5 188711995 188712266 -10917884 - L2 LINE L2 -78 3194 2922 463 302 112 62 chr5 188713534 188713586 -10916564 + L2 LINE L2 2936 2984 -288 249 57 0 0 chr5 188713586 188713621 -10916529 + (CA)n Simple_repeat Simple_repeat 2 36 0 463 302 112 62 chr5 188713621 188713889 -10916261 + L2 LINE L2 2984 3272 0 255 228 177 25 chr5 188714558 188714637 -10915513 + MLT1K LTR MaLR 2 92 -496 2226 100 0 25 chr5 188714781 188715101 -10915049 - AluSx SINE Alu 0 312 1 349 278 87 9 chr5 188715103 188715218 -10914932 + L2 LINE L2 2693 2816 -498 208 313 0 15 chr5 188715209 188715276 -10914874 + L2 LINE L2 2998 3063 -250 * 937 199 5 11 chr5 188715305 188715496 -10914654 - AluJb SINE Alu -7 305 116 181 293 154 32 chr5 188715508 188715631 -10914519 + L2 LINE L2 3167 3304 -9 1184 326 174 21 chr5 188715649 188715767 -10914383 - L2 LINE L2 -655 2659 2560 2206 149 19 19 chr5 188715767 188716130 -10914020 - MLT1A1 LTR MaLR -2 363 1 1184 326 174 21 chr5 188716130 188716166 -10913984 - L2 LINE L2 -754 2560 2531 2977 181 72 48 chr5 188716166 188716875 -10913275 + LTR8A LTR ERV1 2 727 0 1184 326 174 21 chr5 188716875 188717467 -10912683 - L2 LINE L2 -783 2531 2031 1798 154 9 38 chr5 188717467 188717608 -10912542 + AluJb SINE Alu 1 144 -168 1930 142 0 13 chr5 188717608 188717918 -10912232 + AluSx SINE Alu 3 308 -4 1798 154 9 38 chr5 188717918 188718095 -10912055 + AluJb SINE Alu 144 310 -2 1184 326 174 21 chr5 188718095 188718179 -10911971 - L2 LINE L2 -1283 2031 1961 1009 267 4 9 chr5 188718179 188718404 -10911746 - MER58A DNA MER1_type 0 224 1 1184 326 174 21 chr5 188718404 188718844 -10911306 - L2 LINE L2 -1353 1961 1191 790 244 41 46 chr5 188718846 188719250 -10910900 + MLT1A2 LTR MaLR 14 374 0 413 336 80 29 chr5 188719251 188719739 -10910411 - L2 LINE L2 -2121 1193 681 221 292 4 4 chr5 188720112 188720347 -10909803 + (TG)n Simple_repeat Simple_repeat 1 235 0 263 28 28 0 chr5 188720352 188720388 -10909762 + (GA)n Simple_repeat Simple_repeat 2 38 0 991 136 0 24 chr5 188720657 188720826 -10909324 + FRAM SINE Alu 1 165 -11 556 306 60 45 chr5 188720828 188721311 -10908839 - L1ME LINE L1 -313 5808 5319 261 258 15 0 chr5 188721676 188721742 -10908408 + L1ME LINE L1 22 88 -5982 2264 68 3 3 chr5 188721750 188722043 -10908107 - AluY SINE Alu -18 293 1 993 130 0 7 chr5 188722043 188722189 -10907961 - AluSq/x SINE Alu -168 145 1 2198 121 0 6 chr5 188722500 188722813 -10907337 + AluSx SINE Alu 1 311 -1 1244 267 87 14 chr5 188722991 188723557 -10906593 - L1ME LINE L1 -3190 2956 2350 442 322 115 42 chr5 188723563 188723671 -10906479 + L2 LINE L2 2079 2178 -1136 2277 78 3 23 chr5 188723671 188723978 -10906172 - AluSg SINE Alu -9 301 1 442 322 115 42 chr5 188723978 188724493 -10905657 + L2 LINE L2 2178 2748 -566 2171 111 7 0 chr5 188724516 188724823 -10905327 + AluSx SINE Alu 1 309 -3 694 300 24 20 chr5 188724825 188725072 -10905078 - MIR SINE MIR 0 262 15 221 312 165 65 chr5 188725092 188725544 -10904606 + L2 LINE L2 2766 3269 -3 249 233 27 27 chr5 188726015 188726088 -10904062 - MIR SINE MIR -77 185 113 506 196 270 0 chr5 188726169 188726317 -10903833 + MER5A DNA MER1_type 2 189 0 439 295 81 17 chr5 188727042 188727215 -10902935 + MIR SINE MIR 24 207 -55 231 286 91 13 chr5 188727750 188727827 -10902323 + MIR SINE MIR 78 160 -102 236 233 24 86 chr5 188728273 188728426 -10901724 - MIR SINE MIR -61 147 15 199 245 38 0 chr5 188728789 188728842 -10901308 - MIR SINE MIR -66 142 88 564 311 31 45 chr5 188729085 188729307 -10900843 + MIR SINE MIR 30 248 -14 313 289 93 62 chr5 188729694 188730112 -10900038 - L2 LINE L2 -1 3312 2882 241 179 0 0 chr5 188730138 188730177 -10899973 - MIR SINE MIR -7 255 217 338 269 33 12 chr5 188730351 188730473 -10899677 - MIR SINE MIR -66 142 43 222 324 59 0 chr5 188730866 188730968 -10899182 + L2 LINE L2 3165 3272 0 1083 118 5 25 chr5 188730968 188731560 -10898590 + (TGGA)n Simple_repeat Simple_repeat 1 580 0 301 267 0 23 chr5 188732009 188732095 -10898055 - MIR SINE MIR -63 145 62 425 325 25 86 chr5 188732362 188732793 -10897357 + L2 LINE L2 2826 3230 -42 508 254 114 35 chr5 188733353 188733581 -10896569 - MLT1K LTR MaLR -342 246 1 494 274 82 0 chr5 188733584 188733719 -10896431 + MIR SINE MIR 47 192 -70 612 291 89 11 chr5 188734086 188734265 -10895885 + MIR SINE MIR 20 212 -50 557 242 132 0 chr5 188734326 188734516 -10895634 + MER113 DNA MER1_type? 4 218 -303 912 235 20 0 chr5 188734518 188734722 -10895428 - MIR SINE MIR -21 241 34 636 304 53 11 chr5 188734737 188735020 -10895130 + MER113 DNA MER1_type? 222 516 -5 3063 243 109 96 chr5 188735162 188735659 -10894491 + L1MC4 LINE L1 6166 6655 -1387 2091 93 27 23 chr5 188735659 188735960 -10894190 - AluSx SINE Alu -10 302 1 3063 243 109 96 chr5 188735960 188737180 -10892970 + L1MC4 LINE L1 6655 7857 -185 237 65 0 0 chr5 188737180 188737211 -10892939 + (TG)n Simple_repeat Simple_repeat 2 32 0 3063 243 109 96 chr5 188737211 188737268 -10892882 + L1MC4 LINE L1 7857 7912 -130 1098 166 27 45 chr5 188737268 188737491 -10892659 - MER20 DNA MER1_type 0 219 1 3063 243 109 96 chr5 188737491 188737555 -10892595 + L1MC4 LINE L1 7912 8042 0 1167 280 94 12 chr5 188738339 188738614 -10891536 + L2 LINE L2 2776 3027 -286 207 69 0 0 chr5 188738614 188738643 -10891507 + (CCCCCA)n Simple_repeat Simple_repeat 5 33 0 1167 280 94 12 chr5 188738643 188738842 -10891308 + L2 LINE L2 3027 3308 -5 477 324 111 16 chr5 188739130 188739436 -10890714 + L2 LINE L2 2925 3259 -54 202 125 25 0 chr5 188739616 188739656 -10890494 - L3 LINE CR1 -113 1464 1424 181 231 161 28 chr5 188739901 188740044 -10890106 + L2 LINE L2 2735 2896 -418 270 235 94 0 chr5 188740203 188740288 -10889862 - MIR SINE MIR -19 243 151 * 1132 280 135 6 chr5 188740285 188740541 -10889609 - L2 LINE L2 0 3313 3091 1908 101 4 0 chr5 188740541 188740799 -10889351 + AluSp SINE Alu 36 294 -19 1132 280 135 6 chr5 188740799 188741343 -10888807 - L2 LINE L2 -222 3091 2414 535 279 34 0 chr5 188741330 188741477 -10888673 - MIR SINE MIR -103 159 8 * 367 239 34 0 chr5 188741765 188741853 -10888297 - MIR SINE MIR -65 197 107 316 310 122 9 chr5 188742487 188742602 -10887548 - MIR SINE MIR -63 145 20 347 171 110 24 chr5 188742649 188742731 -10887419 + MER46C DNA MER2_type 3 91 -247 249 313 0 42 chr5 188742735 188742831 -10887319 + MIR SINE MIR 61 152 -56 230 202 21 96 chr5 188742853 188742947 -10887203 - MER5A DNA MER1_type -91 98 12 * 247 372 0 0 chr5 188742940 188743034 -10887116 + L2 LINE L2 2694 2787 -527 461 225 158 29 chr5 188743037 188743178 -10886972 + MER46C DNA MER2_type 101 279 -59 2319 163 18 23 chr5 188743178 188743614 -10886536 + Tigger2a DNA MER2_type 1 434 0 461 225 158 29 chr5 188743614 188743681 -10886469 + MER46C DNA MER2_type 279 336 -2 403 302 78 17 chr5 188743695 188743874 -10886276 - MIR SINE MIR -22 240 51 231 333 11 0 chr5 188744055 188744145 -10886005 - L2 LINE L2 -508 2806 2716 895 189 16 0 chr5 188744164 188744349 -10885801 - MER5A DNA MER1_type -1 188 1 314 138 17 0 chr5 188746648 188746706 -10883444 + CT-rich Low_complexity Low_complexity 4 62 0 231 36 0 0 chr5 188746869 188746897 -10883253 + (TG)n Simple_repeat Simple_repeat 1 28 0 2213 94 3 11 chr5 188746935 188747243 -10882907 - AluSq SINE Alu 0 306 1 476 177 0 9 chr5 188747401 188747514 -10882636 + (TG)n Simple_repeat Simple_repeat 1 112 0 291 188 16 0 chr5 188747520 188747584 -10882566 - L2 LINE L2 -248 3065 3001 237 238 238 28 chr5 188747764 188748050 -10882100 - L2 LINE L2 -606 2708 2363 542 261 130 24 chr5 188748305 188748512 -10881638 - MIR SINE MIR -21 241 13 324 161 0 0 chr5 188748533 188748595 -10881555 + (CA)n Simple_repeat Simple_repeat 1 62 0 282 250 70 20 chr5 188748914 188749014 -10881136 + MIR SINE MIR 81 185 -77 581 210 25 13 chr5 188749756 188749913 -10880237 + L1ME4a LINE L1 5963 6121 0 2043 121 11 0 chr5 188750342 188750646 -10879504 + AluSx SINE Alu 1 307 0 417 88 0 0 chr5 188750768 188750825 -10879325 - Alu SINE Alu -252 61 5 2489 92 0 0 chr5 188750989 188751294 -10878856 + AluSx SINE Alu 1 305 -7 203 239 22 0 chr5 188751768 188751814 -10878336 - L2 LINE L2 -3 3269 3223 219 69 0 0 chr5 188751914 188751943 -10878207 + (T)n Simple_repeat Simple_repeat 1 29 0 2363 110 0 0 chr5 188751956 188752255 -10877895 + AluSx SINE Alu 1 299 -13 2694 152 15 22 chr5 188752279 188752824 -10877326 + L1MB8 LINE L1 5638 6178 0 295 247 141 0 chr5 188753398 188753483 -10876667 - L2 LINE L2 -13 3300 3204 825 164 23 6 chr5 188753499 188753676 -10876474 + GA-rich Low_complexity Low_complexity 1 180 0 189 0 0 0 chr5 188753697 188753718 -10876432 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 2294 100 0 3 chr5 188753973 188754264 -10875886 + AluY SINE Alu 1 290 -21 325 271 57 16 chr5 188754267 188754389 -10875761 - L2 LINE L2 -556 2758 2632 1165 174 0 71 chr5 188754553 188754777 -10875373 - AluJo SINE Alu -104 208 1 2291 108 0 3 chr5 188754879 188755176 -10874974 - AluSx SINE Alu -16 296 1 26 64 0 0 chr5 188755295 188755342 -10874808 + AT_rich Low_complexity Low_complexity 1 47 0 599 245 88 0 chr5 188755433 188755592 -10874558 + MIR SINE MIR 61 233 -29 409 95 0 0 chr5 188755665 188755728 -10874422 + Alu SINE Alu 235 297 -12 805 266 14 86 chr5 188755739 188756101 -10874049 - L2 LINE L2 -20 3252 2919 291 255 151 0 chr5 188756342 188756448 -10873702 + MIR SINE MIR 124 245 -17 210 256 35 116 chr5 188756927 188757185 -10872965 + L2 LINE L2 2818 3054 -218 2503 70 20 0 chr5 188757290 188757591 -10872559 - AluY SINE Alu -4 307 1 242 362 38 0 chr5 188757722 188757827 -10872323 + MER91C DNA MER1_type 3 111 -29 602 303 136 6 chr5 188757872 188758093 -10872057 + MIR SINE MIR 9 256 -6 396 321 57 0 chr5 188758311 188758520 -10871630 + L1MC4a LINE L1 5679 5899 -1909 659 237 26 11 chr5 188758533 188758723 -10871427 - MER105 DNA DNA -11 193 1 183 273 121 0 chr5 188758943 188759009 -10871141 + MIR SINE MIR 75 148 -60 1230 237 55 97 chr5 188759677 188760242 -10869908 - L1MC5 LINE L1 -385 7576 7036 202 237 0 51 chr5 188760555 188760614 -10869536 + MIR SINE MIR 141 196 -66 1715 166 4 0 chr5 188761133 188761410 -10868740 + AluJb SINE Alu 1 278 -34 479 298 69 11 chr5 188761550 188761738 -10868412 + MIR SINE MIR 6 204 -58 389 231 58 0 chr5 188761796 188761900 -10868250 + MER81 DNA DNA 3 112 -2 968 139 0 0 chr5 188761919 188762063 -10868087 - AluSg/x SINE Alu 0 312 169 2346 125 0 0 chr5 188763003 188763315 -10866835 + AluSx SINE Alu 1 312 0 843 122 0 43 chr5 188763348 188763536 -10866614 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 494 231 15 15 chr5 188764059 188764193 -10865957 - L2 LINE L2 0 3272 3139 311 247 6 0 chr5 188764510 188764668 -10865482 + (TG)n Simple_repeat Simple_repeat 2 160 0 219 317 59 5 chr5 188764682 188764793 -10865357 - L2 LINE L2 -308 2964 2855 652 259 132 0 chr5 188764813 188765025 -10865125 - MIR SINE MIR -16 246 7 347 244 24 41 chr5 188765023 188765146 -10865004 - L2 LINE L2 -490 2824 2704 * 6005 157 30 8 chr5 188765238 188766363 -10863787 + L1MC1 LINE L1 5186 6333 0 674 264 62 34 chr5 188766370 188766662 -10863488 + L1ME2 LINE L1 5813 6112 -52 872 234 179 40 chr5 188766774 188766811 -10863339 - MLT1J LTR MaLR -113 398 367 1666 258 58 26 chr5 188766811 188767314 -10862836 - LTR40a LTR ERVL 0 519 1 872 234 179 40 chr5 188767314 188767622 -10862528 - MLT1J LTR MaLR -144 367 5 2223 156 11 64 chr5 188767979 188768236 -10861914 - MSTB LTR MaLR 0 426 157 2096 148 0 0 chr5 188768236 188768541 -10861609 + AluSx SINE Alu 4 308 -4 2223 156 11 64 chr5 188768541 188768580 -10861570 - MSTB LTR MaLR -269 157 117 2399 93 0 7 chr5 188768580 188768881 -10861269 + AluSx SINE Alu 1 299 -13 2223 156 11 64 chr5 188768881 188769033 -10861117 - MSTB LTR MaLR -309 117 1 380 245 0 29 chr5 188769148 188769250 -10860900 - MIR SINE MIR -72 136 38 361 266 78 16 chr5 188770167 188770295 -10859855 - L2 LINE L2 -1 3271 3136 208 217 0 22 chr5 188770991 188771037 -10859113 - MIR SINE MIR -11 251 207 665 236 85 8 chr5 188771050 188771309 -10858841 - L2 LINE L2 -350 2964 2686 2199 132 3 0 chr5 188771491 188771801 -10858349 + AluSp SINE Alu 1 311 -2 355 191 11 11 chr5 188771801 188771890 -10858260 + GA-rich Low_complexity Low_complexity 3 91 0 683 269 79 28 chr5 188772515 188772846 -10857304 + L1MEc LINE L1 1278 1634 -4762 2259 100 7 3 chr5 188772846 188773145 -10857005 + AluSx SINE Alu 1 300 -12 683 269 79 28 chr5 188773145 188773207 -10856943 + L1MEc LINE L1 1634 1691 -4705 414 250 57 0 chr5 188773228 188773352 -10856798 - L2 LINE L2 -612 2702 2572 548 161 0 0 chr5 188773355 188773442 -10856708 - AluJ/FLAM SINE Alu -225 87 1 1187 257 20 14 chr5 188773442 188773788 -10856362 - L2 LINE L2 -732 2582 2235 382 242 42 0 chr5 188773843 188773938 -10856212 - MIR SINE MIR -3 259 161 2320 102 3 3 chr5 188773949 188774253 -10855897 - AluSq SINE Alu -9 304 1 212 0 36 0 chr5 188774277 188774305 -10855845 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 301 262 24 36 chr5 188775589 188775673 -10854477 - MIR3 SINE MIR -53 155 73 224 294 76 0 chr5 188776170 188776262 -10853888 - MIR SINE MIR -64 144 46 235 242 54 81 chr5 188776458 188776503 -10853647 - MIR SINE MIR -69 139 94 2401 91 0 0 chr5 188776503 188776800 -10853350 + AluSc SINE Alu 1 297 -12 235 242 54 81 chr5 188776800 188776897 -10853253 - MIR SINE MIR -114 94 9 309 51 0 0 chr5 188777223 188777262 -10852888 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 186 147 0 0 chr5 188778208 188778242 -10851908 + MIR SINE MIR 114 147 -115 306 215 99 25 chr5 188779311 188779432 -10850718 + HAL1b LINE L1 1191 1320 -28 1874 81 0 4 chr5 188779508 188779743 -10850407 + AluSg/x SINE Alu 68 301 -11 218 318 30 61 chr5 188781539 188781671 -10848479 + MIR3 SINE MIR 50 160 -48 202 159 0 45 chr5 188783799 188783843 -10846307 + C-rich Low_complexity Low_complexity 6 47 0 202 222 14 83 chr5 188783907 188783979 -10846171 - MIR SINE MIR -58 150 84 2209 93 41 3 chr5 188785221 188785511 -10844639 + AluSc SINE Alu 1 301 -8 362 212 0 35 chr5 188786603 188786688 -10843462 + MIR SINE MIR 70 151 -111 257 234 40 105 chr5 188787178 188787302 -10842848 + L2 LINE L2 3175 3290 -23 407 270 58 58 chr5 188787391 188787580 -10842570 - MIR SINE MIR -43 219 31 357 196 78 39 chr5 188787895 188787997 -10842153 - MIR3 SINE MIR -21 187 82 302 308 108 0 chr5 188788043 188788163 -10841987 + L1ME4a LINE L1 5989 6121 0 970 231 15 42 chr5 188788192 188788378 -10841772 + MIR SINE MIR 6 184 -78 1631 198 18 9 chr5 188788378 188788716 -10841434 + MER58B DNA MER1_type 1 341 0 970 231 15 42 chr5 188788716 188788793 -10841357 + MIR SINE MIR 184 262 0 443 215 107 20 chr5 188788862 188789011 -10841139 + MER104 DNA Tc2 4 165 -15 2421 100 0 0 chr5 188789321 188789631 -10840519 - AluSg SINE Alu 0 310 1 550 286 0 7 chr5 188790179 188790326 -10839824 - MIR SINE MIR -40 222 77 655 161 42 0 chr5 188790781 188790899 -10839251 - MLT1B LTR MaLR 0 390 268 318 111 37 0 chr5 188790883 188790937 -10839213 - MLT1C LTR MaLR -405 62 7 * 357 314 14 95 chr5 188791017 188791270 -10838880 + L1MB7 LINE L1 4516 4788 -1358 1705 189 3 21 chr5 188791270 188791561 -10838589 + AluJo SINE Alu 1 286 -26 2042 121 0 14 chr5 188791563 188791860 -10838290 - AluSg SINE Alu -17 293 1 357 314 14 95 chr5 188791860 188792173 -10837977 + L1MB7 LINE L1 4789 5039 -1107 737 126 0 0 chr5 188792196 188792307 -10837843 - HY1 scRNA scRNA -1 111 1 2096 132 10 3 chr5 188792325 188792628 -10837522 - AluSx SINE Alu -7 305 1 272 263 15 30 chr5 188792632 188792765 -10837385 + L1MB7 LINE L1 5030 5160 -986 24 0 0 0 chr5 188792808 188792832 -10837318 + AT_rich Low_complexity Low_complexity 1 24 0 1458 95 11 0 chr5 188792932 188793122 -10837028 - AluSq SINE Alu -121 192 1 328 226 66 28 chr5 188793123 188793229 -10836921 + L1MC/D LINE L1 5386 5495 -2313 * 612 265 119 0 chr5 188793227 188793480 -10836670 + L1MC4 LINE L1 7706 7988 -54 1096 131 68 0 chr5 188793494 188793685 -10836465 + L1MA9 LINE L1 5852 6055 -257 352 85 17 0 chr5 188793709 188793768 -10836382 + L1MA9 LINE L1 6253 6312 0 913 165 19 120 chr5 188793770 188794135 -10836015 + L1MB7 LINE L1 5181 5518 -660 394 152 76 0 chr5 188794141 188794220 -10835930 + MSTC LTR MaLR 1 85 -343 * 462 51 0 0 chr5 188794215 188794274 -10835876 + MSTD LTR MaLR 338 396 0 2616 192 25 61 chr5 188794275 188794824 -10835326 + L1MB7 LINE L1 5522 6089 -95 2165 128 0 3 chr5 188794824 188795129 -10835021 - AluSg SINE Alu -6 304 1 1541 215 0 10 chr5 188795139 188795432 -10834718 - AluJo SINE Alu -22 290 1 2616 192 25 61 chr5 188795432 188795559 -10834591 + L1MB7 LINE L1 6098 6184 0 1309 271 115 98 chr5 188795995 188796135 -10834015 + MSTA LTR MaLR 3 139 -289 1803 146 11 0 chr5 188796135 188796415 -10833735 + AluSx SINE Alu 17 299 -13 1309 271 115 98 chr5 188796415 188796651 -10833499 + MSTA LTR MaLR 139 389 -39 2161 128 0 3 chr5 188796651 188796948 -10833202 - AluSg1 SINE Alu -13 296 1 1309 271 115 98 chr5 188796948 188796987 -10833163 + MSTA LTR MaLR 389 426 -2 2109 139 3 0 chr5 188797146 188797449 -10832701 + AluJb SINE Alu 1 304 -8 285 98 0 0 chr5 188797457 188797498 -10832652 + (GAAAA)n Simple_repeat Simple_repeat 5 45 0 315 257 74 29 chr5 188798264 188798439 -10831711 - L2 LINE L2 -411 2903 2721 224 133 56 35 chr5 188798561 188798631 -10831519 - MIR SINE MIR -87 121 84 480 209 0 0 chr5 188798847 188799019 -10831131 + (CA)n Simple_repeat Simple_repeat 1 172 0 432 200 0 0 chr5 188799034 188799169 -10830981 + (CA)n Simple_repeat Simple_repeat 2 136 0 2118 81 5 8 chr5 188799470 188799861 -10830289 + LTR7 LTR ERV1 1 440 -10 421 303 21 14 chr5 188799951 188800096 -10830054 - MER5B DNA MER1_type -32 146 1 206 296 0 0 chr5 188800161 188800215 -10829935 + L2 LINE L2 3218 3271 -1 2200 97 7 7 chr5 188800306 188800604 -10829546 - AluSp SINE Alu -15 298 1 232 291 45 30 chr5 188801499 188801633 -10828517 - MIR SINE MIR -97 165 30 239 279 189 8 chr5 188802074 188802196 -10827954 + MIR3 SINE MIR 19 162 -46 569 291 11 11 chr5 188802255 188802437 -10827713 - MIR SINE MIR -21 241 60 231 290 90 50 chr5 188802511 188802611 -10827539 + L2 LINE L2 3151 3254 -18 332 250 76 56 chr5 188802698 188802842 -10827308 + MIR SINE MIR 61 207 -55 236 210 116 51 chr5 188803305 188803443 -10826707 - MIR3 SINE MIR -55 153 7 662 273 120 1 chr5 188803753 188803980 -10826170 + MIR SINE MIR 11 262 0 1656 147 32 51 chr5 188804132 188804444 -10825706 - AluJo SINE Alu -6 306 1 202 326 0 0 chr5 188804837 188804886 -10825264 - L2 LINE L2 -12 3260 3212 223 349 70 0 chr5 188804895 188805024 -10825126 - MIR SINE MIR -1 261 124 211 174 217 0 chr5 188805578 188805624 -10824526 - MIR SINE MIR -62 146 91 2361 103 3 3 chr5 188806513 188806879 -10823271 + AluSq SINE Alu 1 366 0 468 319 7 7 chr5 188807442 188807577 -10822573 + MIR SINE MIR 5 139 -123 740 206 64 0 chr5 188807792 188807933 -10822217 - MIR SINE MIR -102 160 11 196 313 0 0 chr5 188807968 188808016 -10822134 + L2 LINE L2 3214 3261 -11 190 204 41 20 chr5 188808292 188808341 -10821809 - MIR SINE MIR -205 57 8 326 311 58 53 chr5 188808360 188808566 -10821584 + L1M4 LINE L1 2166 2372 -3774 2487 80 3 0 chr5 188808789 188809091 -10821059 - AluSg SINE Alu -5 305 3 184 267 22 0 chr5 188809289 188809334 -10820816 + L2 LINE L2 3263 3308 -5 214 259 163 59 chr5 188809642 188809777 -10820373 - L2 LINE L2 -17 3255 3107 447 319 57 39 chr5 188809832 188810021 -10820129 + MIR SINE MIR 18 213 -49 228 67 0 0 chr5 188810021 188810051 -10820099 + (TTA)n Simple_repeat Simple_repeat 3 32 0 447 319 57 39 chr5 188810051 188810090 -10820060 + MIR SINE MIR 213 250 -12 616 266 101 0 chr5 188810776 188810945 -10819205 + MIR SINE MIR 34 219 -43 328 329 187 16 chr5 188811264 188811574 -10818576 - L2 LINE L2 -16 3256 2894 508 221 41 8 chr5 188812208 188812330 -10817820 - L2 LINE L2 0 3313 3188 368 322 8 0 chr5 188812358 188812476 -10817674 - MIR SINE MIR -12 250 132 2227 102 7 23 chr5 188812582 188812886 -10817264 + AluSx SINE Alu 1 299 -13 332 272 22 66 chr5 188813670 188813806 -10816344 - L2 LINE L2 0 3313 3184 501 268 19 80 chr5 188813806 188814019 -10816131 - MER63A DNA MER1_type -9 201 2 182 62 31 0 chr5 188814214 188814246 -10815904 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 781 169 0 8 chr5 188814246 188814363 -10815787 - FLAM_C SINE Alu -194 118 1 2065 138 51 59 chr5 188814392 188814783 -10815367 + MLT1B LTR MaLR 1 388 -2 753 198 0 0 chr5 188814902 188815028 -10815122 - FLAM_A SINE Alu -7 126 1 2569 142 16 9 chr5 188815149 188815585 -10814565 - L1MA5 LINE L1 -4 6296 5858 634 212 46 146 chr5 188815889 188815987 -10814163 - L2 LINE L2 0 3313 3207 2187 138 0 3 chr5 188815987 188816298 -10813852 + AluJo SINE Alu 3 312 0 634 212 46 146 chr5 188816298 188816548 -10813602 - L2 LINE L2 -106 3207 3000 355 248 256 0 chr5 188816580 188816705 -10813445 - L2 LINE L2 -550 2764 2608 369 26 66 26 chr5 188816943 188817019 -10813131 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 735 145 8 32 chr5 188817019 188817269 -10812881 + GA-rich Low_complexity Low_complexity 1 244 0 461 279 175 16 chr5 188818056 188818239 -10811911 - MER115 DNA AcHobo -318 375 164 2787 35 0 0 chr5 188818355 188818666 -10811484 - AluY SINE Alu 0 311 1 390 271 46 26 chr5 188818758 188818909 -10811241 + MIR SINE MIR 1 154 -108 498 298 32 38 chr5 188819371 188819507 -10810643 + MIR3 SINE MIR 12 148 -60 1517 193 0 25 chr5 188819507 188819792 -10810358 + AluJo SINE Alu 31 308 -4 498 298 32 38 chr5 188819792 188819813 -10810337 + MIR3 SINE MIR 148 168 -40 1187 166 114 60 chr5 188819884 188820234 -10809916 - LTR8A LTR ERV1 0 727 359 1085 43 0 22 chr5 188820258 188820397 -10809753 - AluY SINE Alu 0 311 176 1678 180 7 20 chr5 188820413 188820741 -10809409 - AluJo SINE Alu 0 312 1 1233 170 69 0 chr5 188820965 188821362 -10808788 + MER21A LTR ERV1 1 440 -423 1429 108 0 35 chr5 188821367 188821598 -10808552 + MER21A LTR ERV1 703 925 -6 861 270 63 77 chr5 188821623 188821742 -10808408 + L1ME3A LINE L1 4456 4575 -1587 2283 133 0 0 chr5 188821742 188822050 -10808100 - AluSg SINE Alu 0 310 3 861 270 63 77 chr5 188822050 188822673 -10807477 + L1ME3A LINE L1 4575 5205 -957 1838 183 7 3 chr5 188822673 188822963 -10807187 + AluJb SINE Alu 1 291 -21 2202 104 7 0 chr5 188822973 188823262 -10806888 + AluSq SINE Alu 3 293 -20 861 270 63 77 chr5 188823262 188823662 -10806488 + L1ME3A LINE L1 5214 5578 -584 2415 77 7 0 chr5 188823670 188823967 -10806183 + AluY SINE Alu 1 299 -12 1051 144 11 6 chr5 188823967 188824141 -10806009 + AluSg/x SINE Alu 134 308 -4 328 309 0 17 chr5 188824142 188824258 -10805892 + L1ME3A LINE L1 5607 5720 -442 2283 121 0 0 chr5 188824267 188824565 -10805585 + AluSx SINE Alu 1 298 -14 1093 156 4 78 chr5 188824572 188824816 -10805334 + L1MB3 LINE L1 5444 5669 -514 282 157 0 0 chr5 188824816 188824867 -10805283 + AluSx SINE Alu 1 51 -250 1421 164 161 26 chr5 188824874 188825264 -10804886 - LTR7 LTR ERV1 -7 443 1 1726 123 16 16 chr5 188825264 188825515 -10804635 + AluSx SINE Alu 47 297 -15 3156 102 15 8 chr5 188825515 188825996 -10804154 + L1MB3 LINE L1 5659 6142 -41 2170 129 10 0 chr5 188825997 188826307 -10803843 + AluSq SINE Alu 1 313 0 290 244 11 22 chr5 188826323 188826413 -10803737 + (TA)n Simple_repeat Simple_repeat 1 89 0 736 258 51 97 chr5 188826478 188826689 -10803461 + L1ME3A LINE L1 5730 5949 -221 234 0 0 0 chr5 188826689 188826715 -10803435 + (TCTA)n Simple_repeat Simple_repeat 3 28 0 736 258 51 97 chr5 188826715 188826742 -10803408 + L1ME3A LINE L1 5949 5976 -194 2321 115 3 0 chr5 188826742 188827046 -10803104 + AluJb SINE Alu 1 305 -7 736 258 51 97 chr5 188827046 188827237 -10802913 + L1ME3A LINE L1 5976 6140 -30 386 336 88 30 chr5 188828054 188828349 -10801801 - L2 LINE L2 -13 3259 2948 198 143 0 0 chr5 188828684 188828719 -10801431 + (A)n Simple_repeat Simple_repeat 1 35 0 251 192 182 50 chr5 188828759 188828858 -10801292 + MIR SINE MIR 34 145 -117 304 278 86 56 chr5 188828881 188829079 -10801071 + L1ME4a LINE L1 5822 6025 -96 28 0 0 26 chr5 188829181 188829200 -10800950 + AT_rich Low_complexity Low_complexity 1 19 -19 2093 95 62 0 chr5 188829200 188829474 -10800676 + AluSg SINE Alu 1 291 -19 28 0 0 26 chr5 188829474 188829493 -10800657 + AT_rich Low_complexity Low_complexity 19 38 0 189 216 0 0 chr5 188829631 188829668 -10800482 + L2 LINE L2 3268 3304 -9 1897 159 7 16 chr5 188830069 188830378 -10799772 - AluJb SINE Alu 0 312 7 2086 149 3 16 chr5 188830427 188830742 -10799408 - AluSx SINE Alu -1 311 1 283 314 66 16 chr5 188831233 188831354 -10798796 - MIR3 SINE MIR -22 186 60 199 267 100 0 chr5 188831397 188831457 -10798693 - MIR SINE MIR -80 182 117 310 212 45 0 chr5 188831795 188831861 -10798289 - MIR SINE MIR -58 150 82 442 265 90 45 chr5 188832540 188832740 -10797410 - MIR SINE MIR -18 244 36 1646 179 31 41 chr5 188833510 188833900 -10796250 - L1MC4 LINE L1 -822 7220 6835 799 126 1 49 chr5 188833902 188834074 -10796076 - MER46B DNA MER2_type 0 236 71 744 115 0 76 chr5 188834042 188834199 -10795951 - MER46B DNA MER2_type -58 178 34 * 1261 126 0 0 chr5 188834235 188834410 -10795740 - AluSp SINE Alu -2 311 137 1771 142 3 73 chr5 188834410 188834726 -10795424 - AluSx SINE Alu -18 294 1 898 185 0 0 chr5 188834727 188834878 -10795272 - MER46B DNA MER2_type -210 26 1 995 209 157 6 chr5 188834881 188835206 -10794944 - L1MC4 LINE L1 -1211 6831 6458 1288 244 90 35 chr5 188835324 188836077 -10794073 - L2 LINE L2 0 3313 2527 25 0 0 0 chr5 188836334 188836359 -10793791 + AT_rich Low_complexity Low_complexity 1 25 0 256 265 132 7 chr5 188836382 188836518 -10793632 + L1MEd LINE L1 688 840 -5279 897 297 78 40 chr5 188836580 188836654 -10793496 - LTR33 LTR ERVL 0 521 451 2235 130 0 0 chr5 188836654 188836962 -10793188 - AluSx SINE Alu -4 308 1 897 297 78 40 chr5 188836962 188837389 -10792761 - LTR33 LTR ERVL -70 451 1 368 275 44 14 chr5 188837389 188837686 -10792464 + L1MEd LINE L1 872 1289 -5021 219 255 108 20 chr5 188837716 188837818 -10792332 - L2 LINE L2 -832 2482 2372 514 211 301 33 chr5 188838714 188838927 -10791223 + MLT1F LTR MaLR 236 505 -37 * 529 229 0 50 chr5 188838917 188839057 -10791093 + MSTC LTR MaLR 27 159 -215 871 87 0 16 chr5 188839074 188839200 -10790950 + AluSq/x SINE Alu 10 133 -180 1017 160 90 14 chr5 188839201 188839413 -10790737 + MSTC LTR MaLR 200 427 -1 245 180 16 0 chr5 188839415 188839476 -10790674 + MLT1F LTR MaLR 478 539 -3 200 256 90 13 chr5 188839484 188839562 -10790588 + L2 LINE L2 2972 3055 -217 1452 294 51 8 chr5 188839570 188840042 -10790108 + MLT1K LTR MaLR 5 496 -92 318 148 0 0 chr5 188840060 188840114 -10790036 + (TTCC)n Simple_repeat Simple_repeat 3 56 0 183 296 19 0 chr5 188840826 188840880 -10789270 - L2 LINE L2 0 3272 3218 1065 204 98 0 chr5 188840920 188841155 -10788995 - MLT1F1 LTR MaLR 0 567 310 1105 94 47 116 chr5 188841185 188841321 -10788829 - MER30 DNA MER1_type -13 217 73 2214 78 13 16 chr5 188841321 188841627 -10788523 - AluSq SINE Alu -8 305 1 1105 94 47 116 chr5 188841627 188841661 -10788489 - MER30 DNA MER1_type -157 73 38 2245 94 0 3 chr5 188841661 188841968 -10788182 - AluSg SINE Alu -4 306 1 1105 94 47 116 chr5 188841968 188842029 -10788121 - MER30 DNA MER1_type -192 38 1 717 235 45 43 chr5 188842056 188842331 -10787819 - MLT1E LTR MaLR -293 274 1 180 216 162 27 chr5 188842338 188842412 -10787738 - MIR SINE MIR -108 154 71 2235 200 87 16 chr5 188842520 188843024 -10787126 - MLT1F LTR MaLR -2 540 1 1238 49 11 70 chr5 188843407 188843592 -10786558 - L1PA7 LINE L1 0 6154 5981 926 269 183 28 chr5 188843770 188843903 -10786247 - MLT1J LTR MaLR 0 511 400 2330 73 0 7 chr5 188843903 188844203 -10785947 - AluSx SINE Alu -13 299 2 926 269 183 28 chr5 188844203 188844463 -10785687 - MLT1J LTR MaLR -111 400 57 254 188 213 0 chr5 188844557 188844637 -10785513 - MER5A DNA MER1_type -86 103 7 411 21 0 0 chr5 188844812 188844860 -10785290 + (TGAA)n Simple_repeat Simple_repeat 1 48 0 249 310 60 0 chr5 188845428 188845528 -10784622 - MIR SINE MIR -33 229 124 23 0 0 0 chr5 188845529 188845552 -10784598 + GC_rich Low_complexity Low_complexity 1 23 0 31 0 0 0 chr5 188846029 188846060 -10784090 + GC_rich Low_complexity Low_complexity 1 31 0 275 268 249 10 chr5 188847040 188847249 -10782901 + MIR SINE MIR 2 260 -2 209 369 31 31 chr5 188847829 188847959 -10782191 - MIR SINE MIR -58 150 21 192 336 44 36 chr5 188848581 188848718 -10781432 - MIR SINE MIR -96 166 29 271 285 212 7 chr5 188848935 188849086 -10781064 + MIR SINE MIR 73 254 -8 * 426 321 21 36 chr5 188849072 188849265 -10780885 + L2 LINE L2 3081 3270 -43 260 273 57 11 chr5 188849778 188849866 -10780284 + MIR3 SINE MIR 65 156 -52 949 198 0 22 chr5 188849952 188850134 -10780016 - MER45A DNA AcHobo 0 178 1 788 172 0 0 chr5 188850335 188850457 -10779693 - FLAM_C SINE Alu -20 123 2 2294 94 0 0 chr5 188850689 188850988 -10779162 + AluSx SINE Alu 5 303 -9 1485 184 7 34 chr5 188851001 188851294 -10778856 + AluJo SINE Alu 1 285 -27 375 78 0 0 chr5 188851294 188851345 -10778805 + (CA)n Simple_repeat Simple_repeat 2 52 0 571 251 103 15 chr5 188851425 188851628 -10778522 - MIR SINE MIR -14 248 28 221 353 0 0 chr5 188852179 188852247 -10777903 + MER5B DNA MER1_type 105 172 -6 373 237 237 13 chr5 188852452 188852604 -10777546 + MER5A DNA MER1_type 4 189 0 235 324 0 0 chr5 188852670 188852744 -10777406 - MER103 DNA DNA -78 88 15 303 240 72 32 chr5 188853606 188853731 -10776419 - L1MD2 LINE L1 -210 6149 6020 1342 117 20 0 chr5 188853783 188853979 -10776171 - AluSq SINE Alu -22 291 92 3287 158 43 18 chr5 188853979 188854589 -10775561 - L1MB1 LINE L1 -227 5941 5304 2257 95 0 7 chr5 188854589 188854893 -10775257 + AluSx SINE Alu 1 302 -10 3287 158 43 18 chr5 188854893 188855030 -10775120 - L1MB1 LINE L1 -864 5304 5172 214 245 128 0 chr5 188855033 188855127 -10775023 - MIR SINE MIR -122 140 35 449 322 26 7 chr5 188855494 188855646 -10774504 + MIR SINE MIR 43 197 -65 360 327 109 28 chr5 188856660 188856871 -10773279 - MIR SINE MIR -24 238 11 378 277 89 0 chr5 188857221 188857333 -10772817 - L2 LINE L2 0 3272 3151 1780 260 57 2 chr5 188857380 188857892 -10772258 - L1MD3 LINE L1 -4 7991 7452 256 254 54 39 chr5 188858335 188858465 -10771685 + L3 LINE CR1 1134 1265 -312 346 296 0 0 chr5 188858531 188858619 -10771531 + MIR SINE MIR 170 257 -5 966 254 77 68 chr5 188858698 188859142 -10771008 - MLT1J2 LTR MaLR 0 450 3 2235 86 0 3 chr5 188859239 188859540 -10770610 - AluSc SINE Alu -9 300 1 293 271 71 14 chr5 188859545 188859685 -10770465 + MER113 DNA MER1_type? 73 220 -301 572 224 0 45 chr5 188859729 188859885 -10770265 + MER113 DNA MER1_type? 298 446 -75 232 333 7 67 chr5 188859954 188860089 -10770061 - L2 LINE L2 -78 3235 3109 467 254 46 0 chr5 188860314 188860444 -10769706 + L2 LINE L2 3136 3271 -1 281 306 78 17 chr5 188860791 188860923 -10769227 - MIR SINE MIR -34 174 33 259 365 71 0 chr5 188861611 188861737 -10768413 - MIR SINE MIR -10 252 118 214 162 0 0 chr5 188862010 188862047 -10768103 + (CACCC)n Simple_repeat Simple_repeat 4 40 0 425 241 30 16 chr5 188862246 188862412 -10767738 + MIR SINE MIR 17 187 -75 458 288 75 33 chr5 188862508 188862645 -10767505 + Charlie8 DNA MER1_type 1 131 -210 2311 91 0 3 chr5 188862645 188862954 -10767196 + AluSx SINE Alu 1 308 -4 2101 118 0 0 chr5 188862956 188863252 -10766898 + AluSx SINE Alu 4 299 -13 458 288 75 33 chr5 188863252 188863351 -10766799 + Charlie8 DNA MER1_type 131 250 -91 289 267 150 17 chr5 188863480 188863600 -10766550 + MIR SINE MIR 15 150 -112 220 333 12 0 chr5 188864252 188864333 -10765817 + L2 LINE L2 3144 3225 -47 243 344 161 5 chr5 188864383 188864569 -10765581 + MIR SINE MIR 47 261 -1 227 211 81 122 chr5 188865149 188865272 -10764878 - MIR SINE MIR -34 228 111 275 310 103 56 chr5 188865428 188865660 -10764490 + MIR SINE MIR 20 262 0 1985 123 7 7 chr5 188865824 188866124 -10764026 + AluJb SINE Alu 1 300 -12 3377 171 34 8 chr5 188866127 188866717 -10763433 + MER6A DNA MER2_type 1 605 0 355 357 23 0 chr5 188867129 188867258 -10762892 - L2 LINE L2 0 3313 3182 182 256 182 8 chr5 188868139 188868260 -10761890 - L2 LINE L2 -217 3055 2914 234 382 59 0 chr5 188868564 188868666 -10761484 + MIR SINE MIR 111 218 -44 426 183 73 0 chr5 188868894 188868976 -10761174 + MIR SINE MIR 106 193 -69 460 165 17 68 chr5 188869207 188869359 -10760791 + MIR SINE MIR 58 198 -63 478 305 75 66 chr5 188869599 188869947 -10760203 - L2 LINE L2 -2 3270 2920 200 258 30 30 chr5 188871247 188871313 -10758837 - MIR SINE MIR -88 174 109 317 280 11 0 chr5 188871414 188871507 -10758643 - MER91A DNA MER1_type -102 94 1 184 253 264 0 chr5 188871813 188871904 -10758246 - L2 LINE L2 0 3272 3158 496 315 111 4 chr5 188872022 188872257 -10757893 - MIR SINE MIR -1 261 2 708 289 93 26 chr5 188872747 188873261 -10756889 + L2 LINE L2 2750 3312 -1 387 301 29 22 chr5 188873257 188873393 -10756757 + MIR SINE MIR 114 250 -12 * 1949 127 16 3 chr5 188873700 188874007 -10756143 - AluSq SINE Alu 0 313 3 234 0 0 0 chr5 188874030 188874056 -10756094 + (A)n Simple_repeat Simple_repeat 1 26 0 746 244 71 44 chr5 188874408 188874703 -10755447 + MER113 DNA MER1_type? 1 303 -218 1444 121 129 12 chr5 188874726 188874974 -10755176 - AluSg SINE Alu -33 277 1 588 263 71 5 chr5 188874980 188875178 -10754972 + MER113 DNA MER1_type? 294 504 -17 233 229 43 0 chr5 188875553 188875623 -10754527 + MER112 DNA MER1_type 5 77 -183 1921 128 13 7 chr5 188875637 188875935 -10754215 + AluSx SINE Alu 1 300 -12 1565 107 33 20 chr5 188875987 188876231 -10753919 - AluSx SINE Alu -6 306 60 258 255 32 11 chr5 188876339 188876433 -10753717 + MER112 DNA MER1_type 165 260 0 287 268 280 18 chr5 188876475 188876643 -10753507 - MIR SINE MIR -14 248 37 2259 94 7 3 chr5 188876769 188877077 -10753073 - AluSx SINE Alu -3 309 1 1044 291 42 6 chr5 188877187 188877545 -10752605 - L1ME3 LINE L1 0 6162 5792 585 243 42 41 chr5 188878276 188878479 -10751671 - MIR SINE MIR -35 227 20 215 309 32 56 chr5 188878570 188878696 -10751454 + L2 LINE L2 3150 3272 0 243 247 0 0 chr5 188878711 188878784 -10751366 + (ATG)n Simple_repeat Simple_repeat 1 73 0 460 291 143 5 chr5 188879541 188879730 -10750420 - MIR SINE MIR -11 251 37 549 261 72 46 chr5 188879822 188880017 -10750133 - MIR SINE MIR 0 262 63 3335 146 18 6 chr5 188880059 188880606 -10749544 + L1MC1 LINE L1 5779 6332 -1 251 211 268 0 chr5 188881602 188881725 -10748425 - MER117 DNA MER1_type -35 162 7 373 303 41 0 chr5 188881858 188882003 -10748147 + MER102a DNA MER1_type 4 154 -176 314 263 0 0 chr5 188882058 188882138 -10748012 + MER102a DNA MER1_type 235 314 -16 208 313 60 12 chr5 188882670 188882753 -10747397 - L2 LINE L2 -47 3225 3139 210 301 18 97 chr5 188882846 188882959 -10747191 - L2 LINE L2 -162 3110 3007 1116 274 89 13 chr5 188882977 188883371 -10746779 + L2 LINE L2 2863 3286 -27 198 357 13 32 chr5 188883979 188884133 -10746017 + MIR SINE MIR 101 251 -11 2136 134 0 0 chr5 188884253 188884566 -10745584 + AluSq SINE Alu 1 313 0 524 309 90 14 chr5 188885352 188885575 -10744575 + MIR SINE MIR 16 255 -7 1721 176 28 100 chr5 189086969 189087508 -10542642 - MLT1D LTR MaLR -5 500 1 298 250 0 23 chr5 189087707 189087795 -10542355 + (TA)n Simple_repeat Simple_repeat 1 86 0 1988 181 20 0 chr5 189088222 189088570 -10541580 - MLT1A1 LTR MaLR 0 365 11 555 329 32 5 chr5 189088717 189088933 -10541217 + MIR SINE MIR 37 258 -4 1896 88 0 0 chr5 189088973 189089201 -10540949 + AluSc SINE Alu 61 288 -21 22 56 0 0 chr5 189089259 189089295 -10540855 + AT_rich Low_complexity Low_complexity 1 36 0 1964 242 31 26 chr5 189089313 189089788 -10540362 - LTR40a LTR ERVL 0 519 31 355 241 7 7 chr5 189090468 189090605 -10539545 + GA-rich Low_complexity Low_complexity 2 138 0 399 249 52 134 chr5 189091852 189092218 -10537932 - MLT1K LTR MaLR 0 588 253 659 190 0 36 chr5 189093460 189093597 -10536553 - FLAM_C SINE Alu -10 133 2 2629 62 3 0 chr5 189094215 189094522 -10535628 - AluSp SINE Alu -5 308 1 27 0 0 0 chr5 189094535 189094562 -10535588 + AT_rich Low_complexity Low_complexity 1 27 0 480 216 84 108 chr5 189094731 189094993 -10535157 - L1M2 LINE L1 -2300 4908 4641 2367 95 0 0 chr5 189094993 189095289 -10534861 - AluSx SINE Alu -16 296 1 480 216 84 108 chr5 189095289 189095693 -10534457 - L1M2 LINE L1 -2567 4641 4258 558 263 146 24 chr5 189095762 189095975 -10534175 + MIR SINE MIR 2 240 -22 278 220 73 37 chr5 189095999 189096108 -10534042 - L1M2 LINE L1 -3045 4163 4051 2281 107 0 3 chr5 189096310 189096618 -10533532 - AluSq SINE Alu -6 307 1 2022 125 14 7 chr5 189097076 189097373 -10532777 + AluSx SINE Alu 1 299 -13 2622 194 17 27 chr5 189097659 189097754 -10532396 - L1M2 LINE L1 -3123 4085 3991 2325 115 0 6 chr5 189097754 189098068 -10532082 - AluSx SINE Alu 0 312 1 2622 194 17 27 chr5 189098068 189098390 -10531760 - L1M2 LINE L1 -3217 3991 3674 1699 114 0 4 chr5 189098390 189098618 -10531532 - AluSg/x SINE Alu -8 302 76 2622 194 17 27 chr5 189098618 189098837 -10531313 - L1M2 LINE L1 -3534 3674 3454 2259 127 99 23 chr5 189098840 189099233 -10530917 - MSTA LTR MaLR 0 428 6 4727 198 94 43 chr5 189099289 189100714 -10529436 - L1M2 LINE L1 -3788 3420 1930 327 260 53 77 chr5 189100726 189100895 -10529255 - MLT1K LTR MaLR -19 569 405 463 271 125 34 chr5 189100896 189101313 -10528837 - L1M2 LINE L1 -5297 1912 687 329 176 199 9 chr5 189104071 189104215 -10525935 - MLT1J LTR MaLR -29 482 245 1236 136 182 27 chr5 189104672 189104788 -10525362 - AluSg1 SINE Alu -11 298 201 2487 99 8 6 chr5 189104788 189105142 -10525008 - THE1A LTR MaLR 0 355 1 11503 106 6 1 chr5 189105142 189106714 -10523436 - THE1A-int LTR MaLR 0 1580 1 2485 107 8 8 chr5 189106714 189107069 -10523081 - THE1A LTR MaLR 0 355 1 1236 136 182 27 chr5 189107069 189107208 -10522942 - AluSg1 SINE Alu -107 202 1 263 234 290 0 chr5 189107652 189107759 -10522391 + MER5A DNA MER1_type 46 183 -6 2168 120 13 0 chr5 189107903 189108211 -10521939 + AluSp SINE Alu 2 313 0 358 253 152 0 chr5 189109018 189109117 -10521033 - MER81 DNA DNA 0 114 1 2475 60 3 25 chr5 189110442 189110759 -10519391 - AluY SINE Alu -1 310 1 713 180 100 7 chr5 189110851 189111001 -10519149 + THE1C LTR MaLR 1 164 -211 451 276 0 24 chr5 189111545 189111672 -10518478 - MLT1K LTR MaLR -28 560 437 408 71 0 0 chr5 189111813 189111869 -10518281 + (CA)n Simple_repeat Simple_repeat 1 56 0 954 248 58 69 chr5 189112582 189112973 -10517177 + MLT1G LTR MaLR 16 338 -217 964 182 17 6 chr5 189112978 189113154 -10516996 + MLT1A1 LTR MaLR 3 180 -185 316 229 160 38 chr5 189113161 189113292 -10516858 + MIR SINE MIR 116 262 0 2273 112 7 0 chr5 189113783 189114086 -10516064 + AluSx SINE Alu 1 305 -7 3924 205 69 51 chr5 189114149 189115370 -10514780 - MER31-int LTR ERV1 -704 4167 3008 317 96 19 19 chr5 189115375 189115427 -10514723 + MER106B DNA MER1_type 1008 1059 0 343 195 49 0 chr5 189115447 189115529 -10514621 - LTR54B LTR ERV1 -364 134 49 1278 154 202 116 chr5 189115529 189116107 -10514043 - MER31-int LTR ERV1 -1528 3408 2881 2500 84 3 0 chr5 189116107 189116416 -10513734 + AluSp SINE Alu 1 310 -3 2370 90 0 0 chr5 189116417 189116716 -10513434 + AluSg SINE Alu 1 299 -11 1278 154 202 116 chr5 189116716 189116845 -10513305 - MER31-int LTR ERV1 -2054 2882 2608 247 353 49 57 chr5 189118841 189119085 -10511065 - L2 LINE L2 -1 3271 3030 2149 217 125 1 chr5 189119201 189120013 -10510137 + L1ME1 LINE L1 4969 5859 -307 2048 115 3 7 chr5 189120314 189120602 -10509548 - AluSx SINE Alu -25 287 1 1248 174 4 37 chr5 189120603 189120845 -10509305 + L1MD3 LINE L1 6740 6973 -1022 825 197 26 0 chr5 189120908 189121060 -10509090 - FRAM SINE Alu -20 156 1 719 208 8 0 chr5 189121503 189121628 -10508522 - FLAM_A SINE Alu -6 127 2 2379 95 3 9 chr5 189121675 189121990 -10508160 + AluSq SINE Alu 1 313 0 887 107 29 136 chr5 189122999 189123041 -10507109 - THE1B LTR MaLR 0 364 319 2611 64 0 6 chr5 189123041 189123353 -10506797 + AluY SINE Alu 1 310 -1 887 107 29 136 chr5 189123353 189123516 -10506634 - THE1B LTR MaLR -45 319 181 196 329 24 0 chr5 189123643 189123728 -10506422 - L2 LINE L2 0 3313 3227 232 360 24 0 chr5 189124312 189124437 -10505713 + MIR SINE MIR 20 147 -61 572 329 35 24 chr5 189124592 189124847 -10505303 - MIR SINE MIR -3 259 2 214 279 213 59 chr5 189125068 189125262 -10504888 - L2 LINE L2 -462 2852 2603 836 114 8 195 chr5 189125262 189125498 -10504652 + 7SK RNA RNA 1 192 -1 214 279 213 59 chr5 189125498 189125575 -10504575 - L2 LINE L2 -711 2603 2539 268 300 82 29 chr5 189125707 189125877 -10504273 + MIR SINE MIR 10 188 -74 476 282 84 20 chr5 189125927 189126129 -10504021 - MIR SINE MIR -13 249 35 1065 118 26 65 chr5 189126129 189126358 -10503792 + AluY SINE Alu 1 220 -91 21 0 0 0 chr5 189126614 189126635 -10503515 + AT_rich Low_complexity Low_complexity 1 21 0 2444 74 10 0 chr5 189126643 189126939 -10503211 - AluSp SINE Alu -14 299 1 288 226 16 0 chr5 189127305 189127367 -10502783 - MIR SINE MIR -111 151 89 2183 67 44 4 chr5 189127537 189127836 -10502314 + AluY SINE Alu 1 310 0 336 191 15 15 chr5 189127839 189127907 -10502243 + LTR24B LTR ERV1 10 77 -499 262 319 42 21 chr5 189128031 189128175 -10501975 + LTR24 LTR ERV1 178 324 -143 242 127 55 18 chr5 189128207 189128262 -10501888 + LTR24B LTR ERV1 513 569 -7 2216 127 0 7 chr5 189128306 189128613 -10501537 + AluSx SINE Alu 1 305 -7 2161 135 33 28 chr5 189129141 189129503 -10500647 + THE1B LTR MaLR 1 364 0 2504 78 0 0 chr5 189130068 189130374 -10499776 - AluY SINE Alu -5 306 1 236 307 58 58 chr5 189130400 189130537 -10499613 + MER5B DNA MER1_type 20 156 -22 2791 135 57 60 chr5 189130719 189131320 -10498830 - MER4D LTR ERV1 -1 865 307 2226 121 3 0 chr5 189131320 189131618 -10498532 + AluSx SINE Alu 1 299 -13 2110 173 46 40 chr5 189131627 189131908 -10498242 + MER50 LTR ERV1 1 288 -446 1926 108 0 7 chr5 189131908 189132185 -10497965 - AluSc SINE Alu -1 308 34 2110 173 46 40 chr5 189132185 189132377 -10497773 + MER50 LTR ERV1 288 477 -257 1418 130 60 30 chr5 189132477 189132746 -10497404 + MER50 LTR ERV1 435 711 -23 4522 120 27 45 chr5 189132747 189133431 -10496719 + MER49 LTR ERV1 196 890 -33 2038 130 0 29 chr5 189133431 189133739 -10496411 + AluSx SINE Alu 1 299 -13 204 40 0 0 chr5 189133739 189133764 -10496386 + (GA)n Simple_repeat Simple_repeat 2 26 0 4522 120 27 45 chr5 189133764 189133819 -10496331 + MER49 LTR ERV1 888 923 0 2368 99 0 7 chr5 189134223 189134525 -10495625 + AluSx SINE Alu 2 301 -11 1509 144 20 0 chr5 189135769 189136019 -10494131 + AluSp SINE Alu 1 255 -58 1451 247 28 0 chr5 189136133 189136457 -10493693 + MER97b DNA MER1_type? 354 686 -367 230 211 83 37 chr5 189136463 189136572 -10493578 + MER97b DNA MER1_type? 936 1049 -4 579 298 111 5 chr5 189136727 189136935 -10493215 + MIR SINE MIR 25 254 -8 2269 122 0 3 chr5 189136944 189137248 -10492902 - AluSq SINE Alu -10 303 1 2886 198 23 60 chr5 189137312 189138013 -10492137 + LTR8 LTR ERV1 1 675 -16 568 257 61 0 chr5 189138148 189138296 -10491854 - Charlie8 DNA MER1_type -2256 161 5 512 167 73 20 chr5 189138442 189138592 -10491558 - L1MC5 LINE L1 -214 7747 7590 1004 178 8 53 chr5 189138646 189138893 -10491257 - MER106A DNA MER1_type 0 236 1 739 238 45 49 chr5 189138902 189139167 -10490983 - L1MC5 LINE L1 -399 7562 7299 240 217 17 0 chr5 189139193 189139253 -10490897 - L1MC5 LINE L1 -722 7239 7179 506 295 35 23 chr5 189140097 189140270 -10489880 + MIR SINE MIR 71 245 -17 2186 109 0 0 chr5 189140324 189140627 -10489523 + AluY SINE Alu 1 303 -8 506 271 59 56 chr5 189140630 189140936 -10489214 + L1MC4a LINE L1 5600 5906 -1902 1463 160 52 33 chr5 189141114 189141420 -10488730 - AluJo SINE Alu 0 312 1 595 240 65 0 chr5 189141841 189141995 -10488155 + MIR SINE MIR 29 192 -70 479 309 36 12 chr5 189142200 189142368 -10487782 - MER5B DNA MER1_type 0 178 7 24 0 0 0 chr5 189142989 189143013 -10487137 + AT_rich Low_complexity Low_complexity 1 24 0 2785 50 3 0 chr5 189143293 189143634 -10486516 + L1PA6 LINE L1 5812 6153 -1 482 275 51 14 chr5 189143696 189143834 -10486316 - MIR SINE MIR -66 196 54 292 281 45 22 chr5 189144032 189144121 -10486029 - MIR SINE MIR -91 171 81 1676 146 14 14 chr5 189144362 189144649 -10485501 + AluJo SINE Alu 1 287 -25 404 289 44 7 chr5 189144881 189145016 -10485134 + MIR SINE MIR 123 262 0 38 0 0 0 chr5 189145050 189145088 -10485062 + AT_rich Low_complexity Low_complexity 1 38 0 1785 137 20 10 chr5 189145088 189145388 -10484762 - AluSx SINE Alu -9 303 1 358 287 23 0 chr5 189145441 189145528 -10484622 + MIR SINE MIR 44 132 -76 397 272 34 20 chr5 189146342 189146489 -10483661 + L2 LINE L2 3165 3313 0 2109 101 3 3 chr5 189146529 189146827 -10483323 - AluSx SINE Alu -14 298 1 445 259 52 0 chr5 189146932 189147064 -10483086 + MIR SINE MIR 4 142 -66 1059 171 28 28 chr5 189147331 189147542 -10482608 - L1MB3 LINE L1 -2 6181 5971 2073 111 3 0 chr5 189147711 189148009 -10482141 + AluSx SINE Alu 1 299 -13 2221 72 0 0 chr5 189148169 189148446 -10481704 - AluY SINE Alu -34 277 1 230 311 119 48 chr5 189148537 189148672 -10481478 + L1ME4a LINE L1 4496 4620 -1526 1889 126 0 11 chr5 189148672 189148982 -10481168 + AluSq SINE Alu 1 307 0 230 311 119 48 chr5 189148982 189149157 -10480993 + L1ME4a LINE L1 4620 4829 -1317 2050 117 10 3 chr5 189149226 189149526 -10480624 - AluSq SINE Alu -11 302 1 231 308 21 56 chr5 189149925 189150068 -10480082 + L1ME4a LINE L1 5682 5819 -1989 2076 116 3 0 chr5 189150079 189150372 -10479778 - AluSg SINE Alu -16 294 1 1331 218 156 17 chr5 189150372 189150776 -10479374 - MLT1C LTR MaLR -2 465 6 340 316 114 15 chr5 189150790 189151053 -10479097 + L1ME4a LINE L1 5830 6118 -3 1819 164 6 6 chr5 189151099 189151410 -10478740 + AluJo SINE Alu 1 311 -1 2127 228 102 136 chr5 189153962 189154638 -10475512 + L1MEc LINE L1 588 1286 -5110 1737 171 10 3 chr5 189154638 189154942 -10475208 + AluJo SINE Alu 1 306 -6 2127 228 102 136 chr5 189154942 189155298 -10474852 + L1MEc LINE L1 1286 1653 -4743 789 195 0 0 chr5 189155298 189155426 -10474724 + FAM SINE Alu 41 168 -17 2127 228 102 136 chr5 189155426 189155456 -10474694 + L1MEc LINE L1 1653 1682 -4714 1935 138 6 10 chr5 189155456 189155767 -10474383 + AluSx SINE Alu 1 310 -2 2127 228 102 136 chr5 189155767 189155967 -10474183 + L1MEc LINE L1 1682 1887 -4509 2197 95 0 3 chr5 189155967 189156263 -10473887 + AluSx SINE Alu 1 295 -17 2127 228 102 136 chr5 189156263 189156358 -10473792 + L1MEc LINE L1 1887 1984 -4412 2153 104 0 23 chr5 189156358 189156665 -10473485 + AluSc SINE Alu 1 300 -9 2127 228 102 136 chr5 189156665 189156937 -10473213 + L1MEc LINE L1 1984 2288 -4108 233 197 16 0 chr5 189157077 189157138 -10473012 + (TA)n Simple_repeat Simple_repeat 1 62 0 27 29 0 0 chr5 189157445 189157479 -10472671 + AT_rich Low_complexity Low_complexity 1 34 0 205 267 174 12 chr5 189158729 189158815 -10471335 + MIR SINE MIR 70 169 -93 180 231 46 62 chr5 189158844 189158909 -10471241 - MIR SINE MIR -6 256 193 180 276 0 158 chr5 189160209 189160361 -10469789 - MIR3 SINE MIR -27 181 54 1926 92 3 68 chr5 189160645 189160970 -10469180 - AluSg SINE Alu -6 304 1 2073 200 45 41 chr5 189161567 189162077 -10468073 + LTR12 LTR ERV1 203 714 0 235 156 0 0 chr5 189162432 189162468 -10467682 + L1MB3 LINE L1 6107 6145 -38 1966 119 7 14 chr5 189162468 189162761 -10467389 + AluSx SINE Alu 1 291 -21 746 292 88 4 chr5 189163329 189163555 -10466595 - MIR SINE MIR -11 251 7 534 225 46 40 chr5 189164075 189164226 -10465924 + MIR SINE MIR 109 260 -2 1244 165 3 140 chr5 189165390 189165718 -10464432 + MLT1A1 LTR MaLR 83 365 0 416 180 33 8 chr5 189165718 189165840 -10464310 + (ATGGTG)n Simple_repeat Simple_repeat 5 129 0 1413 255 73 73 chr5 189166054 189166764 -10463386 - MER21B LTR ERV1 -137 726 17 2504 158 70 7 chr5 189167000 189167429 -10462721 - LTR32 LTR ERVL -1 470 15 267 234 0 0 chr5 189167651 189167698 -10462452 + MIR SINE MIR 59 105 -157 277 326 62 16 chr5 189168466 189168595 -10461555 - MLT1I LTR MaLR -175 234 100 1666 124 65 46 chr5 189169212 189169518 -10460632 + AluJo SINE Alu 1 312 0 871 280 8 15 chr5 189169527 189169788 -10460362 - MIR SINE MIR 0 262 4 267 330 21 10 chr5 189169958 189170055 -10460095 + MIR SINE MIR 4 101 -161 379 288 276 6 chr5 189170227 189170564 -10459586 + L2 LINE L2 2813 3240 -73 2053 93 20 7 chr5 189170894 189171194 -10458956 - AluSx SINE Alu -7 305 2 311 332 0 27 chr5 189171737 189171924 -10458226 - L1MC5 LINE L1 -50 7911 7730 270 0 0 0 chr5 189172349 189172379 -10457771 + (GA)n Simple_repeat Simple_repeat 1 30 0 444 256 147 6 chr5 189174242 189174398 -10455752 + MIR SINE MIR 73 250 -12 460 233 0 0 chr5 189174818 189174921 -10455229 - L1MA7 LINE L1 -25 6266 6164 2098 96 3 10 chr5 189175287 189175580 -10454570 + AluSc SINE Alu 1 291 -18 1819 130 20 30 chr5 189175691 189175992 -10454158 + AluJb SINE Alu 1 298 -14 699 228 7 0 chr5 189176405 189176554 -10453596 + MER58B DNA MER1_type 7 156 -185 952 168 0 6 chr5 189176556 189176717 -10453433 + FRAM SINE Alu 1 155 -21 713 207 14 21 chr5 189176792 189176937 -10453213 + MER58B DNA MER1_type 196 339 -2 307 268 109 7 chr5 189177133 189177271 -10452879 - L1ME4a LINE L1 -39 6082 5931 469 269 91 32 chr5 189177324 189177510 -10452640 - MLT1K LTR MaLR -111 477 281 1805 189 22 38 chr5 189177544 189177915 -10452235 - MLT1A1 LTR MaLR 0 365 1 410 324 101 0 chr5 189178021 189178200 -10451950 - MIR3 SINE MIR -2 206 10 621 214 8 8 chr5 189178304 189178435 -10451715 + FLAM_A SINE Alu 2 132 -1 2316 91 3 0 chr5 189178437 189178746 -10451404 + AluY SINE Alu 1 310 -1 271 271 107 129 chr5 189179226 189179341 -10450809 - L2 LINE L2 -2 3270 3154 2083 129 0 0 chr5 189179341 189179650 -10450500 - AluSx SINE Alu -3 309 1 271 271 107 129 chr5 189179650 189179899 -10450251 - L2 LINE L2 -118 3154 2914 21 0 0 0 chr5 189180261 189180282 -10449868 + AT_rich Low_complexity Low_complexity 1 21 0 353 125 0 0 chr5 189180295 189180351 -10449799 - Alu SINE Alu -1 299 244 1321 160 38 52 chr5 189180353 189180640 -10449510 - L1M3 LINE L1 -557 5623 5341 1167 184 5 9 chr5 189180643 189180866 -10449284 - AluJo SINE Alu -5 307 86 885 262 0 5 chr5 189180923 189181144 -10449006 - AluJo SINE Alu -92 220 1 526 249 102 25 chr5 189181379 189181576 -10448574 - MIR SINE MIR -3 259 48 1217 123 238 12 chr5 189181633 189181877 -10448273 - AluSg1 SINE Alu -10 299 1 4137 168 97 47 chr5 189181906 189182890 -10447260 + pTR5 LTR ERV1 741 1773 -665 745 207 60 34 chr5 189183212 189183600 -10446550 - MER31-int LTR ERV1 -2957 1979 1719 1065 186 0 19 chr5 189183698 189183908 -10446242 - AluJ SINE Alu -1 311 106 1885 217 156 25 chr5 189183908 189184548 -10445602 - MER50 LTR ERV1 -1 733 10 674 180 9 0 chr5 189184551 189184662 -10445488 - AluJ SINE Alu -199 113 2 560 184 74 134 chr5 189184726 189184826 -10445324 - MER31-int LTR ERV1 -3448 1629 1525 2260 93 3 3 chr5 189184826 189185139 -10445011 - AluSq SINE Alu 0 313 1 560 184 74 134 chr5 189185139 189185346 -10444804 - MER31-int LTR ERV1 -3552 1525 1307 3670 131 23 90 chr5 189185346 189186087 -10444063 + LTR8 LTR ERV1 1 691 0 560 184 74 134 chr5 189186087 189186120 -10444030 - MER31-int LTR ERV1 -3770 1307 1274 1953 90 3 47 chr5 189186120 189186471 -10443679 + AluSc SINE Alu 1 309 0 560 184 74 134 chr5 189186471 189186599 -10443551 - MER31-int LTR ERV1 -3803 1274 1095 1522 136 53 8 chr5 189186617 189186882 -10443268 - AluJb SINE Alu -25 287 11 286 146 0 0 chr5 189186896 189186944 -10443206 - MER31-int LTR ERV1 -3687 1184 1137 2165 67 6 19 chr5 189186964 189187278 -10442872 - AluY SINE Alu -1 310 1 1222 149 37 62 chr5 189187398 189187491 -10442659 + MER50 LTR ERV1 477 571 -163 2228 101 10 0 chr5 189187491 189187797 -10442353 - AluSg SINE Alu -1 309 1 1222 149 37 62 chr5 189187797 189187944 -10442206 + MER50 LTR ERV1 571 711 -23 694 219 99 64 chr5 189187970 189188421 -10441729 - LTR48 LTR ERV1 -2 540 217 611 121 0 0 chr5 189188431 189188522 -10441628 - AluJ/FRAM SINE Alu 0 312 222 216 219 31 0 chr5 189188610 189188674 -10441476 + (TGAA)n Simple_repeat Simple_repeat 3 68 0 273 299 153 25 chr5 189188685 189188842 -10441308 + MIR SINE MIR 20 196 -66 313 194 45 0 chr5 189188886 189188953 -10441197 + MER94 DNA DNA 1 70 -64 3835 153 55 22 chr5 189189017 189189711 -10440439 - LTR62 LTR ERVK -2 717 1 2171 103 3 0 chr5 189189793 189190095 -10440055 - AluSx SINE Alu -9 303 1 507 282 127 5 chr5 189190201 189190414 -10439736 + MIR SINE MIR 10 248 -14 398 273 182 13 chr5 189190817 189190971 -10439179 + LTR16C LTR ERVL 270 449 -42 582 230 65 38 chr5 189191005 189191215 -10438935 - MIR SINE MIR -1 261 45 531 320 32 0 chr5 189191967 189192123 -10438027 + MIR SINE MIR 94 254 -8 395 306 85 46 chr5 189192156 189192437 -10437713 - LTR16B LTR ERVL -163 301 10 1835 142 3 10 chr5 189192773 189193068 -10437082 - AluSx SINE Alu -19 293 1 535 244 128 55 chr5 189193357 189193631 -10436519 + MLT1H LTR MaLR 248 541 -8 250 224 0 0 chr5 189194080 189194129 -10436021 - L2 LINE L2 0 3272 3224 900 164 0 0 chr5 189194321 189194473 -10435677 - AluSg/x SINE Alu -8 304 153 415 295 31 66 chr5 189194688 189194915 -10435235 - L2 LINE L2 -227 3045 2827 240 86 0 0 chr5 189195710 189195745 -10434405 + (GA)n Simple_repeat Simple_repeat 1 35 0 470 213 71 46 chr5 189196403 189196600 -10433550 - LTR33 LTR ERVL -18 503 302 303 261 109 22 chr5 189196644 189196736 -10433414 - LTR33 LTR ERVL -332 189 90 774 281 13 26 chr5 189196847 189197078 -10433072 - MIR SINE MIR -33 229 2 536 277 118 5 chr5 189197401 189197608 -10432542 + MIR SINE MIR 23 259 -3 315 293 20 0 chr5 189197672 189197771 -10432379 + MER5B DNA MER1_type 1 101 -77 2230 77 17 3 chr5 189197776 189198074 -10432076 + AluSc SINE Alu 1 302 -7 187 329 55 0 chr5 189198352 189198425 -10431725 + L2 LINE L2 3196 3272 0 1978 151 116 32 chr5 189198481 189198912 -10431238 - MLT1C LTR MaLR 0 467 1 2281 94 3 3 chr5 189199328 189199635 -10430515 + AluSp SINE Alu 1 307 -6 6414 161 25 14 chr5 189199707 189200719 -10429431 - L1PB4 LINE L1 0 6156 5157 2173 118 0 0 chr5 189200719 189201024 -10429126 - AluSq SINE Alu -8 305 1 6414 161 25 14 chr5 189201024 189202186 -10427964 - L1PB4 LINE L1 -999 5157 3954 1692 104 12 8 chr5 189202291 189202541 -10427609 - AluSc SINE Alu -58 251 1 2046 104 20 0 chr5 189203085 189203382 -10426768 + AluSx SINE Alu 1 303 -9 610 272 169 54 chr5 189203421 189203828 -10426322 - MLT1L LTR MaLR -3 612 159 582 259 91 28 chr5 189203828 189204068 -10426082 + MLT1G LTR MaLR 1 267 -303 376 257 102 75 chr5 189204223 189204449 -10425701 + L2 LINE L2 3075 3306 -7 385 265 66 22 chr5 189204686 189204822 -10425328 - MIR SINE MIR -32 230 89 211 256 0 0 chr5 189204934 189204973 -10425177 - L3 LINE CR1 -107 1470 1432 180 227 0 23 chr5 189205757 189205801 -10424349 + MIR SINE MIR 164 206 -56 234 275 123 118 chr5 189206000 189206211 -10423939 - L2 LINE L2 -6 3266 3055 2470 181 9 5 chr5 189206285 189206717 -10423433 - Tigger2a DNA MER2_type 0 434 1 1157 276 105 28 chr5 189207425 189207893 -10422257 - L2 LINE L2 -3 3310 2807 1551 104 0 0 chr5 189208089 189208301 -10421849 - AluSg/x SINE Alu -6 304 93 1884 147 7 0 chr5 189208451 189208743 -10421407 + AluSx SINE Alu 3 296 -16 1045 136 36 123 chr5 189208743 189209051 -10421099 - MER97c DNA MER1_type? -770 320 40 298 177 292 44 chr5 189209200 189209313 -10420837 + MIR3 SINE MIR 6 146 -62 686 210 145 47 chr5 189209453 189209667 -10420483 - MIR SINE MIR 0 262 28 355 269 37 30 chr5 189210078 189210212 -10419938 - MIR SINE MIR -115 147 13 230 162 176 27 chr5 189211485 189211559 -10418591 + MLT1I LTR MaLR 281 365 -44 556 239 7 7 chr5 189211607 189211749 -10418401 - L3 LINE CR1 -42 1535 1394 476 305 14 7 chr5 189212084 189212225 -10417925 + MIR SINE MIR 26 167 -95 3066 151 72 84 chr5 189212249 189212824 -10417326 - LTR8A LTR ERV1 0 727 161 2287 91 0 0 chr5 189212824 189213121 -10417029 - AluSq SINE Alu -16 297 1 3066 151 72 84 chr5 189213121 189213281 -10416869 - LTR8A LTR ERV1 -566 161 1 205 368 37 9 chr5 189213569 189213712 -10416438 + MIR SINE MIR 7 151 -57 1547 134 117 23 chr5 189213712 189213752 -10416398 - L1MB8 LINE L1 0 6178 6143 2324 119 30 25 chr5 189213752 189214114 -10416036 - THE1B LTR MaLR 0 364 1 1547 134 117 23 chr5 189214114 189214380 -10415770 - L1MB8 LINE L1 -35 6143 5843 270 184 237 0 chr5 189214894 189214970 -10415180 - MIR SINE MIR -54 208 115 4050 149 20 34 chr5 189215156 189215844 -10414306 + L1MB3 LINE L1 5025 5693 -490 2036 118 0 0 chr5 189215844 189216131 -10414019 - AluSq SINE Alu -26 287 1 4050 149 20 34 chr5 189216131 189216376 -10413774 + L1MB3 LINE L1 5693 5940 -243 2357 137 83 14 chr5 189218159 189218655 -10411495 - L1MA4 LINE L1 -2 6298 5769 948 153 153 5 chr5 189218658 189218906 -10411244 - AluJo SINE Alu 0 350 73 2695 163 14 6 chr5 189218906 189219398 -10410752 - L1MA4 LINE L1 -950 5196 4701 1455 199 33 16 chr5 189219401 189219707 -10410443 - AluJo SINE Alu -1 311 1 758 204 0 58 chr5 189219711 189219731 -10410419 - MLT1A2 LTR MaLR -212 162 142 1387 170 110 28 chr5 189219731 189220049 -10410101 + MER2 DNA MER2_type 1 344 0 758 204 0 58 chr5 189220049 189220200 -10409950 - MLT1A2 LTR MaLR -232 142 1 460 250 110 22 chr5 189220337 189220473 -10409677 + MIR SINE MIR 78 225 -37 2448 54 0 13 chr5 189221261 189221575 -10408575 + AluY SINE Alu 1 310 -1 994 57 8 0 chr5 189221598 189221721 -10408429 + AluSq/x SINE Alu 1 124 -188 413 105 0 79 chr5 189221759 189221812 -10408338 + AluSq/x SINE Alu 77 124 -188 189 0 0 0 chr5 189221812 189221833 -10408317 + (TA)n Simple_repeat Simple_repeat 2 22 0 413 105 0 79 chr5 189221833 189221855 -10408295 + AluSq/x SINE Alu 124 146 -166 1207 122 0 94 chr5 189221855 189222110 -10408040 + AluSg/x SINE Alu 77 307 -5 243 308 118 35 chr5 189222326 189222615 -10407535 + L2 LINE L2 775 1087 -2227 344 222 71 4 chr5 189223350 189223476 -10406674 - MIR SINE MIR -79 183 3 350 189 14 27 chr5 189224248 189224322 -10405828 + MLT1I LTR MaLR 323 395 -14 * 1766 187 56 37 chr5 189224320 189224391 -10405759 - Charlie1b DNA MER1_type -2238 523 455 2632 178 30 46 chr5 189224391 189224958 -10405192 + MER74A LTR ERVL 1 558 0 1766 187 56 37 chr5 189224958 189225351 -10404799 - Charlie1b DNA MER1_type -2306 455 50 2135 105 10 3 chr5 189225379 189225675 -10404475 + AluSq SINE Alu 1 298 -15 296 250 0 0 chr5 189225684 189225752 -10404398 + L1P LINE L1 3393 3460 -2686 1301 54 12 6 chr5 189225752 189225920 -10404230 + L1MA1 LINE L1 6130 6298 -4 559 147 18 220 chr5 189225925 189226211 -10403939 + L1 LINE L1 3433 3660 -2486 1533 94 17 13 chr5 189226313 189226546 -10403604 + AluSg/x SINE Alu 76 309 -1 2089 162 71 27 chr5 189226578 189226985 -10403165 + MER61B LTR ERV1 1 425 0 2192 82 0 3 chr5 189227038 189227342 -10402808 - AluY SINE Alu -8 303 1 268 191 0 0 chr5 189227437 189227479 -10402671 - LTR49-int LTR ERV1 -4123 813 772 1775 191 25 0 chr5 189227498 189227880 -10402270 + MER54A LTR ERVL 1 793 0 328 222 0 0 chr5 189227880 189227940 -10402210 - MER31A LTR ERV1 -400 85 26 484 177 53 25 chr5 189227940 189228074 -10402076 - LTR49-int LTR ERV1 -3687 2644 858 2153 115 0 7 chr5 189228143 189228448 -10401702 - AluSc SINE Alu -6 303 1 1089 158 36 151 chr5 189228508 189228974 -10401176 - LTR49-int LTR ERV1 -4239 3298 468 486 241 58 7 chr5 189229127 189229264 -10400886 - LTR49-int LTR ERV1 -7065 472 329 * 736 298 68 28 chr5 189229235 189229557 -10400593 - LTR49-int LTR ERV1 -4088 2243 1909 1463 206 51 33 chr5 189229563 189229898 -10400252 + MER61A LTR ERV1 1 341 -2 944 193 115 30 chr5 189229909 189230343 -10399807 - LTR54B LTR ERV1 -4 494 1 684 221 98 0 chr5 189230557 189230720 -10399430 - AluJo/FRAM SINE Alu -4 308 130 2242 99 0 3 chr5 189230722 189231026 -10399124 - AluSg SINE Alu -7 303 1 930 226 143 11 chr5 189231382 189231585 -10398565 - LTR37A LTR ERV1 0 426 251 390 21 0 0 chr5 189231585 189231632 -10398518 + (TG)n Simple_repeat Simple_repeat 2 48 0 930 226 143 11 chr5 189231632 189231777 -10398373 - LTR37A LTR ERV1 -175 251 32 2238 101 3 0 chr5 189231779 189232087 -10398063 - AluSx SINE Alu -3 309 1 291 355 8 8 chr5 189232209 189232333 -10397817 + MER67B LTR ERV1 38 161 -500 452 267 47 85 chr5 189232361 189232597 -10397553 + MER67A LTR ERV1 317 543 0 2205 109 0 3 chr5 189232654 189232957 -10397193 + AluSp SINE Alu 1 302 -11 1218 146 38 23 chr5 189233046 189233453 -10396697 - LTR54 LTR ERV1 -15 495 23 1548 242 11 14 chr5 189233463 189233823 -10396327 - MER57-int LTR ERV1 -392 7145 6787 629 257 50 27 chr5 189233829 189234060 -10396090 - MER57-int LTR ERV1 -569 4302 4171 605 159 0 28 chr5 189234217 189234324 -10395826 - MER57-int LTR ERV1 -795 4076 3973 388 367 18 12 chr5 189234643 189234812 -10395338 - MER5A DNA MER1_type -7 182 13 732 229 7 0 chr5 189235059 189235203 -10394947 + FRAM SINE Alu 1 144 -32 327 25 0 0 chr5 189235203 189235243 -10394907 + (TAA)n Simple_repeat Simple_repeat 1 40 0 576 208 146 49 chr5 189235335 189235561 -10394589 - Charlie8 DNA MER1_type -2160 257 10 824 265 72 57 chr5 189235578 189235842 -10394308 + MLT1J LTR MaLR 108 375 -136 2168 108 0 0 chr5 189235860 189236166 -10393984 - AluSx SINE Alu -6 306 1 1206 214 49 46 chr5 189236421 189236809 -10393341 - LTR37A LTR ERV1 0 426 38 2245 86 3 0 chr5 189236820 189237111 -10393039 - AluSc SINE Alu -17 292 1 827 131 7 35 chr5 189237261 189237406 -10392744 + AluSq/x SINE Alu 1 141 -172 249 299 11 35 chr5 189237467 189237554 -10392596 + MER5B DNA MER1_type 6 90 -88 1853 261 74 80 chr5 189237781 189237794 -10392356 + L2 LINE L2 1719 1731 -1582 180 0 0 0 chr5 189237794 189237814 -10392336 + (CACCC)n Simple_repeat Simple_repeat 5 24 0 1853 261 74 80 chr5 189237814 189238521 -10391629 + L2 LINE L2 1731 2441 -872 2373 108 0 0 chr5 189238521 189238827 -10391323 - AluSg SINE Alu -4 306 1 201 176 0 0 chr5 189238830 189238864 -10391286 + T-rich Low_complexity Low_complexity 1 34 0 1853 261 74 80 chr5 189238864 189238877 -10391273 + L2 LINE L2 2443 2455 -858 1174 171 25 8 chr5 189238877 189239122 -10391028 - L1MA8 LINE L1 -10 6281 6033 1853 261 74 80 chr5 189239122 189239956 -10390194 + L2 LINE L2 2455 3295 -18 736 185 25 0 chr5 189240046 189240208 -10389942 - MER5A DNA MER1_type -23 166 1 639 307 71 0 chr5 189241059 189241284 -10388866 - MIR SINE MIR -5 257 17 616 225 46 46 chr5 189241917 189241938 -10388212 - MER20B DNA MER1_type -36 747 727 2190 87 24 0 chr5 189241938 189242226 -10387924 + AluSx SINE Alu 1 295 -17 616 225 46 46 chr5 189242226 189242444 -10387706 - MER20B DNA MER1_type -55 728 508 2339 121 10 63 chr5 189242856 189243271 -10386879 + MER57A LTR ERV1 1 393 -10 2339 99 0 10 chr5 189243366 189243679 -10386471 + AluSq SINE Alu 3 312 -1 2217 116 7 3 chr5 189243908 189244209 -10385941 + AluSp SINE Alu 1 302 -11 335 236 50 87 chr5 189244500 189244661 -10385489 - MER20B DNA MER1_type -572 211 57 1226 124 0 0 chr5 189244661 189244838 -10385312 + AluSg/x SINE Alu 130 306 -4 320 224 24 12 chr5 189244899 189244984 -10385166 - MER87 LTR ERV1 -51 490 405 464 0 0 18 chr5 189244984 189245041 -10385109 + (TTTTA)n Simple_repeat Simple_repeat 2 57 0 181 363 75 7 chr5 189245365 189245511 -10384639 - MIR SINE MIR -75 187 32 831 130 0 0 chr5 189246911 189247026 -10383124 + AluSg/x SINE Alu 183 297 -15 198 0 0 0 chr5 189247026 189247048 -10383102 + (TA)n Simple_repeat Simple_repeat 2 23 0 425 239 47 5 chr5 189247204 189247356 -10382794 - L1ME3A LINE L1 -310 5860 5753 919 290 99 19 chr5 189247359 189248008 -10382142 + L1M4 LINE L1 2934 3634 -2512 1743 168 7 23 chr5 189248487 189248790 -10381360 - AluJo SINE Alu -14 298 1 335 223 45 18 chr5 189248950 189249062 -10381088 + L1ME4a LINE L1 5987 6101 -20 1552 152 81 60 chr5 189250727 189250789 -10379361 - MER2 DNA MER2_type 0 344 285 2415 41 41 7 chr5 189250789 189251083 -10379067 - AluY SINE Alu -7 304 1 1552 152 81 60 chr5 189251083 189251355 -10378795 - MER2 DNA MER2_type -59 285 3 2465 70 0 3 chr5 189251929 189252227 -10377923 + AluSp SINE Alu 1 297 -16 362 253 0 0 chr5 189253286 189253373 -10376777 + MIR SINE MIR 164 250 -12 411 179 257 14 chr5 189253837 189253977 -10376173 + MER5A DNA MER1_type 10 183 -6 326 173 53 40 chr5 189254143 189254218 -10375932 + L2 LINE L2 3199 3274 -39 211 298 85 32 chr5 189254666 189254760 -10375390 - MIR SINE MIR -57 151 57 2439 100 0 0 chr5 189254766 189255077 -10375073 - AluY SINE Alu 0 311 1 816 203 68 0 chr5 189255441 189255618 -10374532 + MER5A DNA MER1_type 1 189 0 486 314 94 14 chr5 189255618 189255841 -10374309 + MIR SINE MIR 17 257 -5 475 289 90 19 chr5 189255870 189256081 -10374069 + L1ME4a LINE L1 5473 5698 -2110 2326 92 0 0 chr5 189256236 189256529 -10373621 + AluY SINE Alu 3 295 -16 513 216 160 5 chr5 189256745 189256939 -10373211 + L1ME4a LINE L1 5894 6117 -4 256 319 99 14 chr5 189258038 189258251 -10371899 + L2 LINE L2 2919 3149 -164 296 250 50 30 chr5 189258396 189258496 -10371654 + MLT1L LTR MaLR 514 615 0 4260 170 56 25 chr5 189259357 189260593 -10369557 + L1MB7 LINE L1 4884 6155 -29 237 138 17 69 chr5 189260611 189260669 -10369481 + L1MB7 LINE L1 6114 6168 -16 258 196 0 0 chr5 189260679 189260735 -10369415 + L1MB7 LINE L1 6110 6165 -19 267 257 220 8 chr5 189260792 189261037 -10369113 + L2 LINE L2 2564 2860 -454 206 277 106 38 chr5 189261074 189261309 -10368841 + L2 LINE L2 2969 3219 -94 2343 135 31 31 chr5 189261367 189261595 -10368555 - LTR51 LTR ERV1 -66 605 375 2259 101 7 0 chr5 189261595 189261893 -10368257 + AluSp SINE Alu 1 300 -13 2343 135 31 31 chr5 189261893 189262078 -10368072 - LTR51 LTR ERV1 -295 376 192 870 175 105 50 chr5 189262133 189262333 -10367817 - LTR51 LTR ERV1 -460 211 1 259 273 121 45 chr5 189262377 189262509 -10367641 + MIR SINE MIR 66 207 -55 256 254 61 44 chr5 189263369 189263483 -10366667 + MIR SINE MIR 31 146 -116 261 221 52 37 chr5 189263765 189263901 -10366249 + L1ME3A LINE L1 5262 5399 -765 846 128 8 15 chr5 189263901 189264034 -10366116 + AluJb SINE Alu 1 132 -180 1896 154 3 7 chr5 189264036 189264341 -10365809 + AluJb SINE Alu 1 304 -8 361 244 66 2 chr5 189264357 189264460 -10365690 + L1ME3A LINE L1 5384 5490 -677 665 281 50 41 chr5 189264463 189264783 -10365367 - LTR24 LTR ERV1 0 467 145 466 134 0 24 chr5 189264879 189264961 -10365189 - LTR24B LTR ERV1 -493 83 4 522 238 80 57 chr5 189264962 189265184 -10364966 + L1ME3A LINE L1 5488 5703 -459 1003 237 4 39 chr5 189265184 189265416 -10364734 - MER58A DNA MER1_type 0 224 1 522 238 80 57 chr5 189265416 189265607 -10364543 + L1ME3A LINE L1 5703 5963 -199 256 273 38 76 chr5 189265657 189265789 -10364361 + L1ME3A LINE L1 5965 6091 -79 1774 163 61 0 chr5 189265790 189266119 -10364031 - AluJo SINE Alu 0 347 1 1981 163 0 3 chr5 189266211 189266517 -10363633 - AluJb SINE Alu -7 305 1 286 304 75 32 chr5 189267074 189267327 -10362823 + L1ME LINE L1 5555 5818 -303 2025 139 20 73 chr5 189267783 189267838 -10362312 - THE1C LTR MaLR 0 375 319 2225 54 58 4 chr5 189267838 189268158 -10361992 - AluY SINE Alu 0 311 1 1620 104 5 0 chr5 189268161 189268373 -10361777 - AluSp SINE Alu -17 296 84 2025 139 20 73 chr5 189268373 189268709 -10361441 - THE1C LTR MaLR -58 317 1 4938 142 26 0 chr5 189268719 189269481 -10360669 + LTR39 LTR ERV1 1 782 -1 234 91 0 0 chr5 189269507 189269540 -10360610 + (CAT)n Simple_repeat Simple_repeat 2 34 0 418 225 100 12 chr5 189269544 189269704 -10360446 + MER104 DNA MER2_type 5 178 -2 197 312 156 12 chr5 189269718 189269891 -10360259 - MIR SINE MIR -14 248 51 507 286 106 23 chr5 189270091 189270439 -10359711 + MLT1K LTR MaLR 67 460 -155 2304 119 0 0 chr5 189270439 189270749 -10359401 + AluSg SINE Alu 1 310 0 190 286 214 8 chr5 189271110 189271236 -10358914 + L3 LINE CR1 1375 1526 -51 528 253 6 53 chr5 189271269 189271439 -10358711 + MER5A DNA MER1_type 27 188 -1 362 315 55 16 chr5 189271836 189271963 -10358187 - L2 LINE L2 -3 3269 3138 341 286 112 58 chr5 189272047 189272341 -10357809 - L2 LINE L2 -12 3301 2992 1573 256 48 39 chr5 189272363 189272804 -10357346 + MER70B LTR ERVL 1 445 -133 401 310 186 29 chr5 189272907 189273493 -10356657 - L2 LINE L2 -341 2973 2274 2380 162 30 19 chr5 189273493 189273920 -10356230 - MSTB1 LTR MaLR 0 432 1 401 310 186 29 chr5 189273920 189273984 -10356166 - L2 LINE L2 -1040 2274 2221 1822 132 17 14 chr5 189274419 189274714 -10355436 - AluY SINE Alu -15 296 1 247 342 46 25 chr5 189274794 189275031 -10355119 + L2 LINE L2 3016 3257 -15 518 196 20 7 chr5 189275540 189275688 -10354462 + GA-rich Low_complexity Low_complexity 1 150 0 236 291 76 0 chr5 189276533 189276612 -10353538 + L3 LINE CR1 762 846 -731 404 326 82 70 chr5 189277080 189277190 -10352960 + L3 LINE CR1 911 1018 -559 1519 219 60 0 chr5 189277190 189277509 -10352641 + MER58B DNA MER1_type 4 341 0 404 326 82 70 chr5 189277509 189277729 -10352421 + L3 LINE CR1 1018 1245 -332 231 286 107 0 chr5 189278082 189278166 -10351984 + L3 LINE CR1 1254 1346 -231 222 308 114 42 chr5 189278203 189278563 -10351587 + L2 LINE L2 2885 3270 -2 199 295 98 0 chr5 189278573 189278695 -10351455 + L3 LINE CR1 1363 1496 -81 234 0 0 0 chr5 189281034 189281060 -10349090 + (T)n Simple_repeat Simple_repeat 1 26 0 855 185 107 56 chr5 189282065 189282424 -10347726 - MSTC LTR MaLR 0 428 1 261 255 51 20 chr5 189282436 189282534 -10347616 + MIR SINE MIR 47 147 -115 257 308 37 19 chr5 189282555 189282662 -10347488 - MIR SINE MIR 0 262 154 247 298 48 24 chr5 189282741 189282865 -10347285 - MIR SINE MIR -105 157 31 312 297 11 0 chr5 189282871 189282962 -10347188 + MIR SINE MIR 153 244 -18 375 335 65 6 chr5 189283824 189283994 -10346156 + L1MC/D LINE L1 5578 5757 -2051 685 136 0 59 chr5 189284002 189284120 -10346030 + FRAM SINE Alu 43 153 -23 228 268 14 0 chr5 189284145 189284216 -10345934 + L1MC/D LINE L1 5788 5859 -1949 2093 128 3 3 chr5 189284602 189284899 -10345251 + AluSp SINE Alu 1 297 -16 2757 77 30 6 chr5 189285435 189285801 -10344349 + THE1C LTR MaLR 1 375 0 245 289 132 35 chr5 189285995 189286109 -10344041 - MIR SINE MIR -118 144 20 23 86 0 0 chr5 189286177 189286235 -10343915 + AT_rich Low_complexity Low_complexity 1 58 0 1728 176 10 7 chr5 189287836 189288132 -10342018 - AluJb SINE Alu -15 297 1 3597 180 85 12 chr5 189288284 189289179 -10340971 - L1ME1 LINE L1 -29 6137 5180 203 161 0 0 chr5 189289281 189289312 -10340838 + (TG)n Simple_repeat Simple_repeat 2 32 0 1443 206 4 11 chr5 189289446 189289718 -10340432 + AluJo SINE Alu 1 270 -42 291 57 0 0 chr5 189289718 189289753 -10340397 - THE1A LTR MaLR 0 355 321 * 332 80 22 0 chr5 189289741 189289795 -10340355 - THE1B LTR MaLR -300 55 1 10743 96 13 48 chr5 189289795 189291431 -10338719 - THE1B-int LTR MaLR 0 1580 1 2156 116 53 44 chr5 189291431 189291792 -10338358 - THE1B LTR MaLR 0 364 1 296 219 68 68 chr5 189291910 189292056 -10338094 - MIR SINE MIR -57 205 60 2285 102 0 3 chr5 189292344 189292639 -10337511 + AluSx SINE Alu 1 294 -18 432 330 97 0 chr5 189293260 189293466 -10336684 + MIR SINE MIR 19 244 -18 1585 197 39 28 chr5 189293617 189293973 -10336177 - MLT1A1 LTR MaLR -5 360 1 2532 30 40 0 chr5 189295022 189295318 -10334832 - AluY SINE Alu -3 308 1 1754 195 0 16 chr5 189396492 189396795 -10233355 + AluJo SINE Alu 1 298 -14 2408 92 3 3 chr5 189396796 189397102 -10233048 + AluSq SINE Alu 1 306 -7 359 316 101 0 chr5 189397294 189397433 -10232717 + MIR SINE MIR 10 162 -100 1128 153 19 15 chr5 189397454 189397721 -10232429 + L1MB7 LINE L1 5504 5909 -275 2894 171 4 9 chr5 189397823 189398356 -10231794 - MER6A DNA MER2_type -38 567 38 2015 130 10 7 chr5 189398378 189398677 -10231473 - AluJb SINE Alu -12 300 1 250 306 103 56 chr5 189398841 189399073 -10231077 - MIR SINE MIR 0 262 20 218 211 81 122 chr5 189399229 189399352 -10230798 + MIR SINE MIR 111 228 -34 219 344 161 5 chr5 189399931 189400117 -10230033 - MIR SINE MIR -1 261 47 203 333 12 0 chr5 189400167 189400248 -10229902 - L2 LINE L2 -47 3225 3144 411 320 72 60 chr5 189400720 189401067 -10229083 + L2 LINE L2 2920 3270 -2 432 157 20 73 chr5 189401307 189401460 -10228690 - MIR SINE MIR -63 145 58 426 183 73 0 chr5 189401691 189401773 -10228377 - MIR SINE MIR -69 193 106 340 373 22 0 chr5 189403403 189403537 -10226613 + L2 LINE L2 3136 3272 0 1707 220 90 84 chr5 189403761 189404450 -10225700 + LTR28 LTR ERV1 356 633 -3 2366 90 3 0 chr5 189404505 189404795 -10225355 - AluY SINE Alu -20 291 1 2085 109 11 3 chr5 189404796 189405103 -10225047 - AluSx SINE Alu 0 312 1 533 267 51 104 chr5 189405214 189405588 -10224562 - L2 LINE L2 -771 2543 2190 421 310 108 10 chr5 189405638 189405841 -10224309 - L2 LINE L2 -1379 1935 1713 349 285 53 40 chr5 189405845 189405996 -10224154 + Charlie8 DNA MER1_type 119 271 -2146 1202 105 19 72 chr5 189406262 189406471 -10223679 + MER20 DNA MER1_type 22 219 0 275 260 281 0 chr5 189406473 189406569 -10223581 + L2 LINE L2 3191 3313 0 972 108 0 8 chr5 189406915 189407045 -10223105 + FLAM_C SINE Alu 5 133 -10 24 53 0 0 chr5 189407073 189407111 -10223039 + AT_rich Low_complexity Low_complexity 1 38 0 887 261 60 82 chr5 189407432 189407908 -10222242 + L1ME2 LINE L1 4730 5215 -947 1833 182 7 3 chr5 189407908 189408199 -10221951 + AluJo SINE Alu 1 292 -20 2234 100 7 0 chr5 189408209 189408498 -10221652 + AluSq SINE Alu 3 293 -20 887 261 60 82 chr5 189408498 189408898 -10221252 + L1ME2 LINE L1 5224 5578 -584 2437 77 7 0 chr5 189408906 189409204 -10220946 + AluY SINE Alu 1 300 -11 1054 144 11 6 chr5 189409204 189409378 -10220772 + AluSg/x SINE Alu 134 308 -4 340 309 0 17 chr5 189409379 189409495 -10220655 + L1ME2 LINE L1 5607 5720 -442 2274 124 0 0 chr5 189409504 189409802 -10220348 + AluSx SINE Alu 1 298 -14 1101 156 4 78 chr5 189409809 189410053 -10220097 + L1M3 LINE L1 5444 5669 -514 312 137 0 0 chr5 189410053 189410104 -10220046 + AluSx SINE Alu 1 51 -249 1120 84 39 0 chr5 189410257 189410412 -10219738 - AluSp SINE Alu -152 161 1 295 313 12 0 chr5 189410627 189410710 -10219440 - MIR3 SINE MIR -32 176 93 1973 144 6 6 chr5 189410753 189411065 -10219085 + AluJb SINE Alu 1 312 0 1707 126 0 13 chr5 189411092 189411361 -10218789 + AluSx SINE Alu 52 317 0 732 223 109 5 chr5 189411411 189411595 -10218555 + MER20 DNA MER1_type 17 219 0 21 0 0 0 chr5 189412785 189412806 -10217344 + AT_rich Low_complexity Low_complexity 1 21 0 181 398 48 0 chr5 189412844 189412947 -10217203 - MIR SINE MIR -20 242 135 386 333 149 0 chr5 189413566 189413788 -10216362 + L1MC4a LINE L1 5670 5924 -1884 850 87 0 0 chr5 189413814 189413918 -10216232 + AluSp/q SINE Alu 198 301 -12 279 0 0 0 chr5 189413935 189413966 -10216184 + (CA)n Simple_repeat Simple_repeat 2 32 0 1238 198 72 27 chr5 189413969 189414302 -10215848 + L1M4 LINE L1 4405 4752 -1394 555 174 15 38 chr5 189414291 189414423 -10215727 + L1M4 LINE L1 5026 5154 -992 * 608 53 0 0 chr5 189414423 189414499 -10215651 - AluSp/q SINE Alu -19 294 219 445 277 77 0 chr5 189414499 189414654 -10215496 + L1ME2 LINE L1 5844 6010 -154 609 240 7 0 chr5 189414654 189414808 -10215342 + L1MA10 LINE L1 6180 6334 0 732 223 29 94 chr5 189414813 189415154 -10214996 + L1MC5 LINE L1 6904 7222 -739 491 220 148 11 chr5 189415321 189415503 -10214647 + L1MC5 LINE L1 7262 7468 -493 1456 180 103 0 chr5 189415509 189415770 -10214380 + AluJo SINE Alu 1 288 -24 309 254 84 95 chr5 189415836 189416228 -10213922 + MLT1L LTR MaLR 110 605 -10 497 291 230 17 chr5 189416321 189416427 -10213723 + L2 LINE L2 2954 3036 -277 1918 142 26 7 chr5 189416427 189416730 -10213420 - AluJb SINE Alu -3 309 1 497 291 230 17 chr5 189416730 189416919 -10213231 + L2 LINE L2 3036 3312 -1 219 232 58 126 chr5 189416924 189416993 -10213157 + MER5A DNA MER1_type 1 73 -116 2315 88 3 7 chr5 189416993 189417288 -10212862 + AluSx SINE Alu 1 294 -18 219 232 58 126 chr5 189417288 189417408 -10212742 + MER5A DNA MER1_type 73 177 -12 479 308 99 14 chr5 189417516 189417727 -10212423 - MIR SINE MIR -7 255 27 1240 62 0 7 chr5 189417998 189418144 -10212006 - AluSq/x SINE Alu -167 145 1 1020 288 42 6 chr5 189418254 189418612 -10211538 - L1ME3 LINE L1 0 6162 5792 560 253 88 16 chr5 189419343 189419525 -10210625 - MIR SINE MIR -35 227 33 205 286 40 63 chr5 189419637 189419763 -10210387 + L2 LINE L2 3150 3272 0 243 247 0 0 chr5 189419778 189419851 -10210299 + (ATG)n Simple_repeat Simple_repeat 1 73 0 419 310 19 6 chr5 189420608 189420766 -10209384 - MIR SINE MIR -11 251 92 554 244 141 41 chr5 189420889 189421104 -10209046 - MIR SINE MIR 0 262 27 3048 146 18 6 chr5 189421126 189421673 -10208477 + L1MC1 LINE L1 5779 6332 -1 239 211 268 0 chr5 189422669 189422792 -10207358 - MER117 DNA MER1_type -35 162 7 355 310 41 0 chr5 189422925 189423070 -10207080 + MER102a DNA MER1_type 4 154 -176 309 263 0 0 chr5 189423125 189423205 -10206945 + MER102a DNA MER1_type 235 314 -16 197 289 72 24 chr5 189423734 189423817 -10206333 - L2 LINE L2 -47 3225 3139 202 301 18 97 chr5 189423910 189424023 -10206127 - L2 LINE L2 -162 3110 3007 1090 274 89 13 chr5 189424041 189424435 -10205715 + L2 LINE L2 2863 3286 -27 205 336 27 41 chr5 189425050 189425196 -10204954 + MIR SINE MIR 108 251 -11 2262 132 0 0 chr5 189425316 189425627 -10204523 + AluSq SINE Alu 1 311 -2 283 267 150 17 chr5 189426706 189426826 -10203324 - MIR SINE MIR -112 150 15 2231 118 0 0 chr5 189427055 189427351 -10202799 - AluSx SINE Alu -13 299 4 2443 93 0 3 chr5 189427353 189427663 -10202487 - AluSx SINE Alu -3 309 1 383 287 44 7 chr5 189427664 189427800 -10202350 - MER102a DNA MER1_type -189 141 1 409 232 33 18 chr5 189427896 189428062 -10202088 - MIR SINE MIR -75 187 17 214 162 0 0 chr5 189428261 189428298 -10201852 + (GGGTG)n Simple_repeat Simple_repeat 4 40 0 248 365 71 0 chr5 189428571 189428697 -10201453 + MIR SINE MIR 118 252 -10 276 304 65 11 chr5 189429403 189429495 -10200655 + MIR SINE MIR 60 156 -106 450 261 46 0 chr5 189429856 189429986 -10200164 - L2 LINE L2 -1 3271 3136 225 311 22 82 chr5 189430211 189430346 -10199804 + L2 LINE L2 3109 3235 -78 568 224 0 45 chr5 189430415 189430571 -10199579 - MER113 DNA MER1_type? -75 446 298 291 271 71 14 chr5 189430615 189430755 -10199395 - MER113 DNA MER1_type? -301 220 73 2336 93 0 3 chr5 189430760 189431061 -10199089 + AluSc SINE Alu 1 300 -9 874 264 74 65 chr5 189431158 189431602 -10198548 + MLT1J2 LTR MaLR 3 450 0 340 296 0 0 chr5 189431681 189431769 -10198381 - MIR SINE MIR -5 257 170 237 261 54 39 chr5 189431835 189431965 -10198185 - L3 LINE CR1 -312 1265 1134 1730 256 57 2 chr5 189432408 189432920 -10197230 + L1MD3 LINE L1 7452 7991 -4 371 277 89 0 chr5 189432967 189433079 -10197071 + L2 LINE L2 3151 3272 0 307 332 109 28 chr5 189433429 189433640 -10196510 + MIR SINE MIR 11 238 -24 433 322 26 7 chr5 189434654 189434806 -10195344 - MIR SINE MIR -65 197 43 200 245 128 0 chr5 189435173 189435267 -10194883 + MIR SINE MIR 35 140 -122 3380 157 43 9 chr5 189435270 189435402 -10194748 + L1MB1 LINE L1 5172 5298 -870 2399 100 0 7 chr5 189435402 189435711 -10194439 - AluSx SINE Alu -5 307 1 3380 157 43 9 chr5 189435711 189436321 -10193829 + L1MB1 LINE L1 5298 5941 -227 1429 113 21 0 chr5 189436321 189436515 -10193635 + AluSq SINE Alu 92 289 -24 225 139 23 0 chr5 189436515 189436558 -10193592 + L1MB1 LINE L1 6128 6171 -18 298 240 72 32 chr5 189436569 189436694 -10193456 + L1MD2 LINE L1 6020 6149 -210 366 237 237 13 chr5 189437695 189437847 -10192303 - MER5A DNA MER1_type 0 189 4 214 256 0 13 chr5 189438052 189438122 -10192028 - MER5B DNA MER1_type -6 172 1 552 251 103 15 chr5 189438670 189438873 -10191277 + MIR SINE MIR 28 248 -14 2312 92 3 0 chr5 189439714 189440009 -10190141 + AluY SINE Alu 2 297 -14 613 316 75 26 chr5 189440027 189440406 -10189744 - L2 LINE L2 -717 2597 2195 524 139 194 73 chr5 189440406 189440571 -10189579 + MER5A DNA MER1_type 5 189 0 613 316 75 26 chr5 189440571 189440606 -10189544 - L2 LINE L2 -1119 2195 2163 625 200 0 0 chr5 189440649 189440769 -10189381 + Charlie4 DNA MER1_type 26 145 -1816 303 28 0 0 chr5 189441265 189441301 -10188849 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 246 188 213 0 chr5 189441476 189441556 -10188594 + MER5A DNA MER1_type 7 103 -86 885 269 183 28 chr5 189441650 189441910 -10188240 + MLT1J LTR MaLR 57 275 -236 2480 73 0 7 chr5 189441910 189442211 -10187939 + AluSx SINE Alu 2 300 -12 885 269 183 28 chr5 189442211 189442344 -10187806 + MLT1J LTR MaLR 275 511 0 184 341 37 61 chr5 189442464 189442522 -10187628 + L2 LINE L2 3112 3170 -102 1226 49 11 70 chr5 189442522 189442707 -10187443 + L1PA7 LINE L1 5981 6154 0 184 341 37 61 chr5 189442707 189442812 -10187338 + L2 LINE L2 3170 3271 -1 2170 193 89 18 chr5 189443090 189443594 -10186556 + MLT1F LTR MaLR 1 540 -2 195 216 162 27 chr5 189443702 189443776 -10186374 + MIR SINE MIR 71 154 -108 678 235 45 43 chr5 189443783 189444058 -10186092 + MLT1F1 LTR MaLR 1 274 -293 1098 94 47 116 chr5 189444085 189444146 -10186004 + MER30 DNA MER1_type 1 65 -165 2363 95 0 3 chr5 189444146 189444452 -10185698 + AluSg SINE Alu 1 305 -5 1098 94 47 116 chr5 189444452 189444486 -10185664 + MER30 DNA MER1_type 65 100 -130 2380 83 13 3 chr5 189444486 189444788 -10185362 + AluSq SINE Alu 1 305 -8 1098 94 47 116 chr5 189444788 189444924 -10185226 + MER30 DNA MER1_type 100 217 -13 1012 191 98 0 chr5 189444954 189445189 -10184961 + MLT1F1 LTR MaLR 310 567 0 191 280 20 0 chr5 189445229 189445279 -10184871 + L2 LINE L2 3218 3268 -4 327 177 0 0 chr5 189445983 189446045 -10184105 + GA-rich Low_complexity Low_complexity 3 64 0 1279 292 51 8 chr5 189446063 189446535 -10183615 - MLT1K LTR MaLR -92 496 5 215 244 141 0 chr5 189446543 189446621 -10183529 - L2 LINE L2 -217 3055 2967 252 180 16 0 chr5 189446629 189446690 -10183460 - MLT1F LTR MaLR -3 539 478 996 163 88 14 chr5 189446692 189446907 -10183243 - MSTC LTR MaLR -1 427 197 923 65 24 16 chr5 189446908 189447031 -10183119 - AluSq/x SINE Alu -180 133 10 506 221 0 50 chr5 189447048 189447188 -10182962 - MSTC LTR MaLR -215 159 27 469 211 301 33 chr5 189447178 189447391 -10182759 - MLT1F LTR MaLR -37 505 236 * 219 255 108 20 chr5 189448287 189448389 -10181761 + L2 LINE L2 2372 2482 -832 368 272 45 14 chr5 189448419 189448698 -10181452 - L1MEc LINE L1 -5021 1289 895 897 297 78 40 chr5 189448716 189449143 -10181007 + LTR33 LTR ERVL 1 451 -70 2235 130 0 0 chr5 189449143 189449451 -10180699 + AluSx SINE Alu 1 308 -4 897 297 78 40 chr5 189449451 189449525 -10180625 + LTR33 LTR ERVL 451 521 0 256 265 132 7 chr5 189449587 189449723 -10180427 - L1MEc LINE L1 -5279 840 688 25 0 0 0 chr5 189449746 189449771 -10180379 + AT_rich Low_complexity Low_complexity 1 25 0 1288 244 90 35 chr5 189450028 189450781 -10179369 + L2 LINE L2 2527 3313 0 995 209 157 6 chr5 189450899 189451224 -10178926 + L1MC4 LINE L1 6458 6831 -1211 885 192 0 0 chr5 189451227 189451378 -10178772 + MER46B DNA MER2_type 1 26 -210 1771 142 3 73 chr5 189451379 189451695 -10178455 + AluSx SINE Alu 1 294 -18 1261 126 0 0 chr5 189451695 189451870 -10178280 + AluSp SINE Alu 137 311 -2 744 115 0 76 chr5 189451906 189452063 -10178087 + MER46B DNA MER2_type 34 178 -58 * 799 126 1 49 chr5 189452031 189452203 -10177947 + Tigger4(Zombi) DNA MER2_type 2566 2731 0 1646 179 31 41 chr5 189452205 189452595 -10177555 + L1MC4 LINE L1 6835 7220 -822 442 265 90 45 chr5 189453365 189453565 -10176585 + MIR SINE MIR 36 244 -18 310 212 45 0 chr5 189454244 189454310 -10175840 + MIR SINE MIR 82 150 -58 199 267 100 0 chr5 189454648 189454708 -10175442 + MIR SINE MIR 117 182 -80 264 322 66 16 chr5 189454751 189454872 -10175278 + MIR3 SINE MIR 60 186 -22 2086 149 3 16 chr5 189455363 189455678 -10174472 + AluSx SINE Alu 1 311 -1 1897 159 7 16 chr5 189455727 189456036 -10174114 + AluJb SINE Alu 7 312 0 189 216 0 0 chr5 189456437 189456474 -10173676 - L2 LINE L2 -9 3304 3268 28 0 0 26 chr5 189456612 189456631 -10173519 + AT_rich Low_complexity Low_complexity 1 19 -19 2093 95 62 0 chr5 189456631 189456905 -10173245 - AluSg SINE Alu -19 291 1 28 0 0 26 chr5 189456905 189456924 -10173226 + AT_rich Low_complexity Low_complexity 19 38 0 310 276 100 52 chr5 189457026 189457236 -10172914 - L1ME4a LINE L1 -96 6025 5806 249 192 182 50 chr5 189457247 189457346 -10172804 - MIR SINE MIR -117 145 34 189 147 0 0 chr5 189457386 189457420 -10172730 + (T)n Simple_repeat Simple_repeat 1 34 0 386 336 88 30 chr5 189457755 189458050 -10172100 + L2 LINE L2 2948 3259 -13 736 258 51 97 chr5 189458867 189459058 -10171092 - L1ME3A LINE L1 -30 6140 5942 2321 115 3 0 chr5 189459058 189459362 -10170788 - AluJb SINE Alu -7 305 1 736 258 51 97 chr5 189459362 189459389 -10170761 - L1ME3A LINE L1 -228 5942 5915 234 0 0 0 chr5 189459389 189459415 -10170735 + (TAGA)n Simple_repeat Simple_repeat 3 28 0 736 258 51 97 chr5 189459415 189459626 -10170524 - L1ME3A LINE L1 -255 5915 5730 290 244 11 22 chr5 189459691 189459781 -10170369 + (TA)n Simple_repeat Simple_repeat 2 90 0 2170 129 10 0 chr5 189459797 189460107 -10170043 - AluSq SINE Alu 0 313 1 3156 102 15 8 chr5 189460108 189460589 -10169561 - L1MB3 LINE L1 -41 6142 5659 1726 123 16 16 chr5 189460589 189460840 -10169310 - AluSx SINE Alu -15 297 47 1493 171 158 28 chr5 189460840 189461238 -10168912 + LTR7 LTR ERV1 1 450 0 1548 186 59 54 chr5 189461421 189461809 -10168341 - MLT1B LTR MaLR 0 390 1 228 327 84 37 chr5 189461845 189462059 -10168091 + L2 LINE L2 2376 2599 -715 2160 110 16 13 chr5 189462110 189462420 -10167730 - AluSq SINE Alu -2 311 1 260 293 53 0 chr5 189462638 189462713 -10167437 - MIR SINE MIR -141 121 43 217 281 132 18 chr5 189462862 189462976 -10167174 + MIR SINE MIR 20 146 -116 205 80 0 100 chr5 189463078 189463091 -10167059 + (T)n Simple_repeat Simple_repeat 1 14 -31 1857 166 7 7 chr5 189463091 189463381 -10166769 + AluJb SINE Alu 1 290 -22 205 80 0 100 chr5 189463381 189463401 -10166749 + (T)n Simple_repeat Simple_repeat 14 30 -15 1580 113 133 12 chr5 189463401 189463657 -10166493 + AluSg SINE Alu 1 287 -23 205 80 0 100 chr5 189463657 189463672 -10166478 + (T)n Simple_repeat Simple_repeat 30 45 0 643 198 56 0 chr5 189463787 189463913 -10166237 - FLAM_C SINE Alu 0 133 1 754 178 8 0 chr5 189464428 189464546 -10165604 + AluJb SINE Alu 5 123 -189 482 114 0 14 chr5 189465335 189465405 -10164745 + AluS SINE Alu 2 70 -248 367 153 94 24 chr5 189465433 189465518 -10164632 - L1MEd LINE L1 -5233 886 796 542 206 206 0 chr5 189465610 189465746 -10164404 - L1MEd LINE L1 -5490 629 466 314 339 8 0 chr5 189465744 189465874 -10164276 - L1MEd LINE L1 -5947 172 42 * 645 146 105 0 chr5 189465895 189466066 -10164084 + L1 LINE L1 4639 4827 -1319 2464 73 3 0 chr5 189466896 189467198 -10162952 - AluSp SINE Alu -10 303 1 366 229 7 21 chr5 189467529 189467669 -10162481 + (TTCA)n Simple_repeat Simple_repeat 3 140 0 195 42 0 0 chr5 189467834 189467858 -10162292 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 830 239 45 37 chr5 189468061 189468228 -10161922 + MIR SINE MIR 15 186 -76 2403 104 0 0 chr5 189468228 189468525 -10161625 - AluSx SINE Alu -15 297 1 830 239 45 37 chr5 189468525 189468600 -10161550 + MIR SINE MIR 186 259 -3 404 171 132 26 chr5 189468639 189468761 -10161389 - MIR SINE MIR -19 243 107 305 214 29 107 chr5 189468940 189469080 -10161070 + L1ME4a LINE L1 5987 6115 -6 301 286 76 50 chr5 189469279 189469398 -10160752 + MIR SINE MIR 30 151 -111 2385 94 27 0 chr5 189469752 189470050 -10160100 + AluSq SINE Alu 1 306 -7 209 193 0 18 chr5 189470534 189470591 -10159559 + CT-rich Low_complexity Low_complexity 3 58 0 1569 136 40 57 chr5 189470591 189470892 -10159258 - AluJb SINE Alu -16 296 1 487 268 24 0 chr5 189471550 189471677 -10158473 - MIR SINE MIR -74 188 59 2381 99 0 6 chr5 189471728 189472042 -10158108 - AluSx SINE Alu 0 312 1 2461 68 0 0 chr5 189472056 189472351 -10157799 - AluY SINE Alu -16 295 1 24 0 0 0 chr5 189474671 189474695 -10155455 + AT_rich Low_complexity Low_complexity 1 24 0 573 221 99 35 chr5 189474701 189474873 -10155277 - MIR SINE MIR -64 198 16 266 233 44 33 chr5 189474903 189474993 -10155157 - MIR SINE MIR -118 144 54 2195 71 50 27 chr5 189475104 189475401 -10154749 - AluY SINE Alu -7 304 1 938 140 80 15 chr5 189475405 189475605 -10154545 - MER20 DNA MER1_type 0 219 7 580 309 104 5 chr5 189475692 189475912 -10154238 - MIR SINE MIR -3 259 18 1779 159 7 20 chr5 189476123 189476418 -10153732 - AluJo SINE Alu -21 291 1 268 159 48 32 chr5 189476560 189476623 -10153527 - MIR SINE MIR -131 131 68 306 0 0 0 chr5 189477272 189477306 -10152844 + (CA)n Simple_repeat Simple_repeat 1 34 0 1655 149 52 4 chr5 189477710 189477978 -10152172 + AluJo SINE Alu 1 281 -31 2264 116 3 3 chr5 189477978 189478280 -10151870 - AluSq SINE Alu -10 303 1 244 262 0 47 chr5 189478913 189479020 -10151130 + C-rich Low_complexity Low_complexity 4 105 0 190 260 40 0 chr5 189479309 189479359 -10150791 - MIR SINE MIR -97 111 60 1920 97 0 4 chr5 189480023 189480271 -10149879 - AluSx SINE Alu -12 300 54 457 296 174 14 chr5 189480771 189481116 -10149034 + L2 LINE L2 2883 3282 -31 736 262 38 4 chr5 189481177 189481397 -10148753 + MIR SINE MIR 30 254 -8 207 0 0 0 chr5 189481586 189481597 -10148553 + (TG)n Simple_repeat Simple_repeat 1 34 0 207 0 0 0 chr5 189481597 189481620 -10148530 + (TG)n Simple_repeat Simple_repeat 2 24 0 213 97 32 0 chr5 189481662 189481693 -10148457 + MER5A DNA MER1_type 59 90 -99 473 196 39 0 chr5 189481705 189481807 -10148343 + L1MC5 LINE L1 7809 7914 -47 544 291 11 0 chr5 189481955 189482144 -10148006 + L1ME LINE L1 5575 5765 -356 461 236 113 0 chr5 189482196 189482302 -10147848 - L2 LINE L2 -3 3310 3193 2352 81 0 7 chr5 189482353 189482650 -10147500 + AluSg SINE Alu 1 295 -15 1835 169 10 7 chr5 189482839 189483140 -10147010 + AluJo SINE Alu 2 303 -9 858 241 42 16 chr5 189483562 189483753 -10146397 + MIR SINE MIR 15 210 -52 1769 174 7 7 chr5 189484170 189484464 -10145686 - AluJb SINE Alu -16 296 3 2189 76 7 43 chr5 189484983 189485286 -10144864 + AluY SINE Alu 1 292 -19 2577 57 0 16 chr5 189485288 189485604 -10144546 + AluY SINE Alu 1 311 0 364 264 81 101 chr5 189487044 189487162 -10142988 + MIR SINE MIR 2 121 -141 2149 112 3 7 chr5 189487162 189487470 -10142680 + AluSx SINE Alu 1 307 0 364 264 81 101 chr5 189487470 189487608 -10142542 + MIR SINE MIR 121 254 -8 1610 192 22 34 chr5 189487900 189488031 -10142119 - Charlie1 DNA MER1_type -6 2755 2624 1501 197 36 4 chr5 189488031 189488338 -10141812 - AluJo SINE Alu 0 316 1 1610 192 22 34 chr5 189488338 189488617 -10141533 - Charlie1 DNA MER1_type -137 2624 2349 2059 136 0 0 chr5 189488629 189489078 -10141072 + AluSg SINE Alu 1 449 0 226 132 0 26 chr5 189489092 189489130 -10141020 - Charlie1 DNA MER1_type -2711 50 14 2557 53 0 0 chr5 189489380 189489682 -10140468 + AluY SINE Alu 1 302 -9 2296 101 3 35 chr5 189489697 189490015 -10140135 + AluSq SINE Alu 1 308 -5 1752 107 21 7 chr5 189490142 189490423 -10139727 + L1MB2 LINE L1 5712 5996 -187 1267 146 5 28 chr5 189490437 189490650 -10139500 - AluJo SINE Alu -5 307 100 2001 130 40 3 chr5 189490697 189490996 -10139154 + AluSx SINE Alu 1 310 -2 230 167 0 0 chr5 189490996 189491044 -10139106 + L1MB2 LINE L1 6121 6168 -3 1604 183 53 3 chr5 189491050 189491167 -10138983 + AluJo SINE Alu 1 111 -201 432 82 0 0 chr5 189491167 189491228 -10138922 + (CA)n Simple_repeat Simple_repeat 2 62 0 1604 183 53 3 chr5 189491228 189491394 -10138756 + AluJo SINE Alu 111 298 -14 2067 124 6 25 chr5 189491396 189491710 -10138440 + AluSx SINE Alu 1 308 -4 432 0 0 0 chr5 189491715 189491763 -10138387 + (GGAA)n Simple_repeat Simple_repeat 4 51 0 233 276 142 52 chr5 189491825 189491959 -10138191 - L2 LINE L2 -4 3309 3164 279 250 75 38 chr5 189492123 189492203 -10137947 - L3 LINE CR1 -2 1575 1493 1861 145 10 3 chr5 189492442 189492739 -10137411 + AluJo SINE Alu 7 305 -7 1970 126 30 13 chr5 189492754 189493055 -10137095 - AluSx SINE Alu 0 312 7 220 295 90 39 chr5 189493905 189494061 -10136089 - L2 LINE L2 -223 3049 2886 2486 87 3 0 chr5 189494398 189494709 -10135441 - AluSx SINE Alu 0 312 1 261 266 0 76 chr5 189496116 189496195 -10133955 + L2 LINE L2 3237 3309 -4 2733 32 3 0 chr5 189496230 189496538 -10133612 + AluY SINE Alu 1 309 -2 21 0 0 0 chr5 189496612 189496633 -10133517 + AT_rich Low_complexity Low_complexity 1 21 0 2931 111 77 18 chr5 189497069 189497617 -10132533 - Tigger3(Golem) DNA MER2_type -2 3027 2448 1301 171 58 48 chr5 189497618 189497910 -10132240 + AluJo SINE Alu 1 295 -17 2391 88 0 0 chr5 189498034 189498354 -10131796 - AluSc SINE Alu 0 309 1 2325 106 3 0 chr5 189498551 189498852 -10131298 - AluSq SINE Alu -11 302 1 773 87 69 52 chr5 189498959 189498986 -10131164 - Tigger3(Golem) DNA MER2_type -572 2456 2431 1617 170 7 10 chr5 189498986 189499274 -10130876 - AluJo SINE Alu -18 294 8 773 87 69 52 chr5 189499274 189499419 -10130731 - Tigger3(Golem) DNA MER2_type -597 2431 2281 575 150 0 10 chr5 189499416 189499516 -10130634 - Tigger3(Golem) DNA MER2_type -2921 108 10 * 257 254 32 0 chr5 189499667 189499730 -10130420 + MIR SINE MIR 84 148 -114 1820 149 7 0 chr5 189499968 189500243 -10129907 - AluSx SINE Alu -21 291 15 1492 186 35 28 chr5 189500329 189500619 -10129531 + AluJo SINE Alu 1 292 -20 2162 125 0 3 chr5 189500799 189501096 -10129054 - AluSx SINE Alu -16 296 1 1457 178 33 53 chr5 189501101 189501405 -10128745 - AluJo SINE Alu -14 298 1 39 22 0 0 chr5 189501759 189501805 -10128345 + AT_rich Low_complexity Low_complexity 1 46 0 2409 99 7 0 chr5 189501815 189502118 -10128032 + AluSx SINE Alu 1 305 -7 505 196 165 0 chr5 189502118 189502215 -10127935 - AluSg SINE Alu -194 116 4 216 0 0 0 chr5 189502218 189502242 -10127908 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 775 200 14 7 chr5 189502244 189502389 -10127761 - FRAM SINE Alu -35 141 1 417 265 125 15 chr5 189502403 189502603 -10127547 - L1MC4 LINE L1 -12 8030 7809 21 0 0 0 chr5 189502984 189503005 -10127145 + AT_rich Low_complexity Low_complexity 1 21 0 538 243 129 24 chr5 189503024 189503234 -10126916 + L2 LINE L2 2534 2765 -549 2719 32 0 3 chr5 189503235 189503619 -10126531 - AluY SINE Alu 0 383 1 1031 231 129 78 chr5 189503620 189504056 -10126094 + L2 LINE L2 2748 3219 -94 2399 97 0 7 chr5 189504056 189504366 -10125784 - AluSg SINE Alu -2 308 1 1031 231 129 78 chr5 189504366 189504467 -10125683 + L2 LINE L2 3219 3313 0 2088 133 11 0 chr5 189504502 189504787 -10125363 + AluSx SINE Alu 8 295 -17 1633 158 13 53 chr5 189504841 189505144 -10125006 + AluJo SINE Alu 1 291 -21 2069 143 7 0 chr5 189506367 189506667 -10123483 - AluSx SINE Alu -8 304 3 1862 149 25 4 chr5 189506900 189507181 -10122969 - AluJo SINE Alu -25 287 1 2314 81 0 14 chr5 189507545 189507842 -10122308 + AluSg SINE Alu 1 293 -17 243 0 0 0 chr5 189507842 189507869 -10122281 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1316 155 10 0 chr5 189508984 189509191 -10120959 + AluSg/x SINE Alu 103 311 -1 670 194 0 31 chr5 189509224 189509353 -10120797 + FLAM_A SINE Alu 8 132 -10 2322 91 7 13 chr5 189509395 189509702 -10120448 - AluSx SINE Alu -7 305 1 2408 88 0 0 chr5 189509704 189510000 -10120150 - AluSg SINE Alu -14 296 1 419 339 70 18 chr5 189510283 189510510 -10119640 - MIR SINE MIR -3 259 21 2053 131 22 29 chr5 189511108 189511422 -10118728 - AluJo SINE Alu 0 312 1 484 238 105 37 chr5 189511448 189511617 -10118533 + MIR3 SINE MIR 1 197 -11 1746 123 24 0 chr5 189511977 189512228 -10117922 - AluSx SINE Alu -13 299 43 221 244 0 0 chr5 189512277 189512318 -10117832 + (TG)n Simple_repeat Simple_repeat 2 42 0 4544 156 25 61 chr5 189512323 189512409 -10117741 + L1MA4A LINE L1 4929 5017 -1286 2261 102 7 10 chr5 189512409 189512712 -10117438 + AluSp SINE Alu 1 302 -11 4544 156 25 61 chr5 189512712 189512829 -10117321 + L1MA4A LINE L1 5017 5137 -1166 1965 146 0 32 chr5 189512829 189513137 -10117013 + AluJb SINE Alu 1 298 -14 4544 156 25 61 chr5 189513137 189513232 -10116918 + L1MA4A LINE L1 5137 5234 -1069 2672 52 0 0 chr5 189513232 189513540 -10116610 + AluY SINE Alu 1 308 -3 4544 156 25 61 chr5 189513540 189513810 -10116340 + L1MA4A LINE L1 5234 5512 -791 2049 138 9 31 chr5 189513810 189514128 -10116022 + AluSx SINE Alu 1 311 -1 4544 156 25 61 chr5 189514128 189514906 -10115244 + L1MA4A LINE L1 5512 6222 -81 247 287 23 46 chr5 189515104 189515191 -10114959 + MIR SINE MIR 46 130 -78 4244 188 43 16 chr5 189515226 189515669 -10114481 + MER21B LTR ERV1 1 430 -433 2068 127 17 0 chr5 189515669 189515960 -10114190 - AluSx SINE Alu -14 298 3 4244 188 43 16 chr5 189515960 189516355 -10113795 + MER21B LTR ERV1 430 862 -1 312 206 0 16 chr5 189516369 189516432 -10113718 - MER5B DNA MER1_type -115 63 2 2429 87 0 0 chr5 189517191 189517490 -10112660 + AluSq SINE Alu 2 300 -13 2474 100 0 0 chr5 189517499 189517809 -10112341 + AluSg SINE Alu 1 310 0 2533 128 26 19 chr5 189517976 189518398 -10111752 - Tigger2 DNA MER2_type 0 2718 2294 392 231 340 20 chr5 189518520 189518723 -10111427 + L2 LINE L2 3045 3312 -1 1601 191 34 7 chr5 189518893 189519186 -10110964 - AluJo SINE Alu -11 301 1 2354 72 3 0 chr5 189519212 189519505 -10110645 + AluY SINE Alu 1 294 -17 2199 143 59 27 chr5 189520917 189521191 -10108959 - MSTB LTR MaLR -7 419 126 2342 111 39 28 chr5 189521191 189521551 -10108599 - THE1B LTR MaLR 0 364 1 2199 143 59 27 chr5 189521551 189521682 -10108468 - MSTB LTR MaLR -300 126 1 2184 75 46 0 chr5 189521705 189521986 -10108164 + AluY SINE Alu 1 294 -17 235 250 9 62 chr5 189522203 189522315 -10107835 - L1MC4a LINE L1 -458 7350 7245 1299 191 18 76 chr5 189522407 189522736 -10107414 - AluJb SINE Alu -2 310 1 1467 194 34 14 chr5 189522802 189523095 -10107055 - AluJo SINE Alu -13 299 1 2054 135 0 7 chr5 189523122 189523431 -10106719 - AluSx SINE Alu 0 310 4 1900 160 0 13 chr5 189523502 189523809 -10106341 + AluJb SINE Alu 2 304 -8 2053 88 3 35 chr5 189523860 189524178 -10105972 + AluY SINE Alu 1 308 -3 34 0 0 0 chr5 189524278 189524312 -10105838 + AT_rich Low_complexity Low_complexity 1 34 0 190 0 67 0 chr5 189524331 189524361 -10105789 + (TTG)n Simple_repeat Simple_repeat 2 33 0 417 210 41 181 chr5 189524370 189524780 -10105370 - L1MD3 LINE L1 -1057 6938 6535 2520 81 3 0 chr5 189524785 189525093 -10105057 - AluSg SINE Alu 0 310 2 2154 141 10 0 chr5 189525094 189525398 -10104752 - AluSx SINE Alu -5 307 1 1859 127 68 10 chr5 189525458 189525750 -10104400 - AluJb SINE Alu -2 310 2 401 326 96 65 chr5 189525779 189525835 -10104315 - L1MC4a LINE L1 -1474 6334 6281 543 235 17 8 chr5 189525835 189525954 -10104196 + FLAM_A SINE Alu 5 124 -9 1789 178 10 0 chr5 189525956 189526249 -10103901 - AluJo SINE Alu -16 296 1 401 326 96 65 chr5 189526249 189526419 -10103731 - L1MC4a LINE L1 -1527 6281 6098 452 240 15 73 chr5 189526420 189526624 -10103526 - L1MC4a LINE L1 -1810 5998 5807 556 309 52 5 chr5 189526637 189526847 -10103303 - L1MC4a LINE L1 -2065 5743 5524 2565 58 0 10 chr5 189526848 189527156 -10102994 + AluY SINE Alu 1 305 -6 1485 136 5 0 chr5 189527166 189527379 -10102771 + AluSx SINE Alu 1 214 -98 306 63 89 89 chr5 189529930 189530009 -10100141 + AluSx SINE Alu 224 302 0 209 193 0 18 chr5 189530495 189530552 -10099598 + CT-rich Low_complexity Low_complexity 3 58 0 1565 139 40 57 chr5 189530552 189530853 -10099297 - AluJb SINE Alu -16 296 1 487 268 24 0 chr5 189531511 189531638 -10098512 - MIR SINE MIR -74 188 59 2381 99 0 6 chr5 189531689 189532003 -10098147 - AluSx SINE Alu 0 312 1 2488 64 0 0 chr5 189532017 189532312 -10097838 - AluY SINE Alu -16 295 1 24 0 0 0 chr5 189534626 189534650 -10095500 + AT_rich Low_complexity Low_complexity 1 24 0 573 221 99 35 chr5 189534656 189534828 -10095322 - MIR SINE MIR -64 198 16 266 233 44 33 chr5 189534858 189534948 -10095202 - MIR SINE MIR -118 144 54 2184 74 50 27 chr5 189535059 189535356 -10094794 - AluY SINE Alu -7 304 1 939 165 70 5 chr5 189535360 189535560 -10094590 - MER20 DNA MER1_type 0 219 7 580 309 104 5 chr5 189535647 189535867 -10094283 - MIR SINE MIR -3 259 18 1750 166 7 20 chr5 189536078 189536373 -10093777 - AluJo SINE Alu -21 291 1 268 159 48 32 chr5 189536515 189536578 -10093572 - MIR SINE MIR -131 131 68 324 0 0 0 chr5 189537227 189537263 -10092887 + (CA)n Simple_repeat Simple_repeat 1 36 0 1655 149 52 4 chr5 189537668 189537936 -10092214 + AluJo SINE Alu 1 281 -31 2273 115 3 3 chr5 189537936 189538239 -10091911 - AluSq SINE Alu -9 304 1 285 259 241 18 chr5 189539040 189539152 -10090998 + MIR SINE MIR 10 146 -116 1863 177 3 0 chr5 189539156 189539467 -10090683 + AluSx SINE Alu 1 312 0 202 212 0 0 chr5 189539505 189539538 -10090612 + L2 LINE L2 3222 3254 -18 190 244 0 0 chr5 189540063 189540104 -10090046 + L2 LINE L2 3231 3271 -1 223 321 105 43 chr5 189540366 189540481 -10089669 + MIR SINE MIR 21 150 -112 2456 84 0 0 chr5 189540481 189540779 -10089371 + AluSq SINE Alu 1 298 -15 223 321 105 43 chr5 189540779 189540825 -10089325 + MIR SINE MIR 150 192 -70 378 239 115 9 chr5 189541400 189541513 -10088637 + MIR SINE MIR 21 145 -117 404 264 78 31 chr5 189541912 189542149 -10088001 - MIR SINE MIR -3 259 3 2308 84 37 0 chr5 189542916 189543215 -10086935 - AluSg SINE Alu 0 310 1 693 263 93 5 chr5 189543631 189543825 -10086325 + MIR SINE MIR 48 258 -4 1539 123 142 22 chr5 189543875 189544143 -10086007 - AluSx SINE Alu -12 300 1 222 284 45 15 chr5 189544180 189544247 -10085903 - L2 LINE L2 -17 3255 3187 243 306 104 42 chr5 189544549 189544742 -10085408 + MARNA DNA Mariner 299 503 -83 304 343 82 0 chr5 189545878 189546024 -10084126 + L2 LINE L2 3114 3271 -1 2187 109 0 3 chr5 189546056 189546359 -10083791 - AluSg SINE Alu -8 302 1 2121 117 3 3 chr5 189546361 189546670 -10083480 - AluSx SINE Alu -3 309 1 353 286 81 52 chr5 189547029 189547123 -10083027 - L1ME LINE L1 -592 5570 5480 1969 113 21 0 chr5 189547123 189547406 -10082744 - AluSx SINE Alu -10 302 14 353 286 81 52 chr5 189547406 189547450 -10082700 - L1ME LINE L1 -682 5480 5439 1604 186 10 16 chr5 189547450 189547757 -10082393 - AluJb SINE Alu -7 305 1 353 286 81 52 chr5 189547757 189548045 -10082105 - L1ME LINE L1 -723 5439 5140 1641 181 3 7 chr5 189548129 189548421 -10081729 - AluJo SINE Alu -17 295 5 691 268 114 21 chr5 189548570 189548945 -10081205 + MLT1K LTR MaLR 17 488 -100 181 222 67 0 chr5 189549101 189549146 -10081004 + MIR SINE MIR 101 148 -114 285 336 50 60 chr5 189550295 189550578 -10079572 - L2 LINE L2 0 3272 2993 302 360 16 0 chr5 189550735 189550860 -10079290 + MIR3 SINE MIR 76 202 -6 506 222 35 45 chr5 189551282 189551434 -10078716 - MIR SINE MIR -62 146 5 440 290 131 23 chr5 189551605 189551826 -10078324 + MIR SINE MIR 14 258 -4 245 280 0 0 chr5 189552883 189552958 -10077192 + L1MC/D LINE L1 5682 5756 -2052 2376 80 0 0 chr5 189552982 189553283 -10076867 + AluSx SINE Alu 1 301 -11 343 296 68 8 chr5 189553631 189553763 -10076387 + L2 LINE L2 3132 3271 -1 308 318 91 15 chr5 189554247 189554379 -10075771 - MER5A DNA MER1_type -1 188 47 1848 88 32 0 chr5 189554498 189554748 -10075402 + AluSx SINE Alu 1 258 -54 302 303 37 18 chr5 189554849 189554958 -10075192 - L1M4 LINE L1 -2962 3184 3074 347 300 173 10 chr5 189555869 189556072 -10074078 - MIR SINE MIR -21 241 9 210 287 83 38 chr5 189556420 189556577 -10073573 - L2 LINE L2 -223 3049 2886 2159 122 3 0 chr5 189556914 189557225 -10072925 - AluSx SINE Alu 0 312 1 452 285 139 0 chr5 189557227 189557364 -10072786 + L2 LINE L2 3117 3272 0 233 336 47 0 chr5 189557886 189557993 -10072157 + L2 LINE L2 2950 3061 -211 433 313 67 29 chr5 189558261 189558469 -10071681 + MIR SINE MIR 28 243 -19 246 62 0 0 chr5 189558791 189558823 -10071327 + (TCC)n Simple_repeat Simple_repeat 1 32 0 209 273 20 50 chr5 189558866 189558965 -10071185 + L2 LINE L2 2420 2515 -799 180 0 0 0 chr5 189558969 189558989 -10071161 + (TCC)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr5 189559028 189559048 -10071102 + (TCC)n Simple_repeat Simple_repeat 1 20 0 189 0 0 0 chr5 189559087 189559108 -10071042 + (TCC)n Simple_repeat Simple_repeat 3 23 0 914 304 85 14 chr5 189559108 189559615 -10070535 + L2 LINE L2 2432 2974 -340 267 196 0 0 chr5 189559811 189559857 -10070293 + L2 LINE L2 3227 3272 0 318 239 80 0 chr5 189559891 189559979 -10070171 - MIR3 SINE MIR -46 162 68 259 286 42 121 chr5 189560139 189560495 -10069655 - L2 LINE L2 -128 3144 2817 441 288 103 0 chr5 189560933 189561079 -10069071 + MIR SINE MIR 48 208 -54 416 219 142 58 chr5 189562100 189562307 -10067843 + MIR SINE MIR 21 255 -7 518 167 98 38 chr5 189562506 189562638 -10067512 - MIR SINE MIR -92 170 31 236 346 69 20 chr5 189562953 189563155 -10066995 + L2 LINE L2 3080 3291 -22 193 291 112 22 chr5 189563418 189563552 -10066598 + L2 LINE L2 1522 1667 -1647 203 270 43 43 chr5 189563666 189563781 -10066369 + L2 LINE L2 2045 2159 -1155 1549 185 70 86 chr5 189563789 189564029 -10066121 - Charlie4a DNA MER1_type -1457 504 275 1484 158 49 8 chr5 189564029 189564295 -10065855 - AluJb SINE Alu -35 277 1 1549 185 70 86 chr5 189564295 189564541 -10065609 - Charlie4a DNA MER1_type -1686 275 26 646 307 166 24 chr5 189564584 189564619 -10065531 + L2 LINE L2 2163 2192 -1122 600 152 194 73 chr5 189564619 189564784 -10065366 - MER5A DNA MER1_type 0 189 5 646 307 166 24 chr5 189564784 189565181 -10064969 + L2 LINE L2 2192 2531 -783 2280 72 0 26 chr5 189565181 189565486 -10064664 - AluY SINE Alu -14 297 1 646 307 166 24 chr5 189565486 189565509 -10064641 + L2 LINE L2 2531 2549 -765 909 205 67 5 chr5 189565509 189565704 -10064446 + MER3 DNA MER1_type 3 209 0 646 307 166 24 chr5 189565704 189565787 -10064363 + L2 LINE L2 2549 2780 -534 320 275 163 25 chr5 189565876 189566036 -10064114 + MLT1H1 LTR MaLR 63 244 -311 621 272 168 4 chr5 189566076 189566308 -10063842 - Charlie8 DNA MER1_type -2145 272 3 443 227 142 0 chr5 189566436 189566577 -10063573 + MIR SINE MIR 78 238 -24 359 224 199 51 chr5 189566720 189566916 -10063234 + L2 LINE L2 3089 3313 0 385 249 130 50 chr5 189566917 189567078 -10063072 - MIR SINE MIR -62 200 30 483 273 29 77 chr5 189567696 189567905 -10062245 + MIR SINE MIR 63 261 -1 2017 142 0 0 chr5 189567918 189568229 -10061921 - AluSx SINE Alu -1 311 1 209 268 103 21 chr5 189568298 189568395 -10061755 - L2 LINE L2 0 3272 3168 212 146 0 83 chr5 189568397 189568445 -10061705 + MIR SINE MIR 106 149 -59 232 262 61 61 chr5 189568611 189568775 -10061375 + L1ME LINE L1 5726 5889 -232 * 252 358 67 12 chr5 189568764 189568929 -10061221 + L1ME4a LINE L1 5598 5771 -2037 337 164 259 52 chr5 189569016 189569113 -10061037 + MIR SINE MIR 74 200 -62 2091 122 6 3 chr5 189569113 189569425 -10060725 + AluSq SINE Alu 1 313 0 337 164 259 52 chr5 189569425 189569443 -10060707 + MIR SINE MIR 200 213 -49 * 601 268 104 36 chr5 189569435 189569495 -10060655 - MIR SINE MIR -21 241 187 2170 95 0 3 chr5 189569495 189569790 -10060360 + AluSg SINE Alu 1 294 -16 601 268 104 36 chr5 189569790 189569949 -10060201 - MIR SINE MIR -75 187 7 311 291 211 30 chr5 189570415 189570614 -10059536 + L1ME4a LINE L1 5881 6115 -6 413 309 67 0 chr5 189571176 189571325 -10058825 - MIR SINE MIR -72 190 32 2452 75 0 3 chr5 189571357 189571665 -10058485 + AluSx SINE Alu 1 307 -5 1080 252 81 48 chr5 189571732 189572152 -10057998 + LTR16A1 LTR ERVL 1 434 -23 2094 96 34 0 chr5 189572723 189573016 -10057134 + AluSq SINE Alu 1 303 -10 216 267 251 46 chr5 189573057 189573252 -10056898 + MIR SINE MIR 6 240 -22 1912 136 7 13 chr5 189573777 189574085 -10056065 - AluSx SINE Alu -6 306 1 207 0 0 0 chr5 189574198 189574221 -10055929 + (A)n Simple_repeat Simple_repeat 1 23 0 1668 160 28 3 chr5 189574290 189574577 -10055573 - AluJb SINE Alu -18 294 1 2467 43 0 13 chr5 189574583 189574884 -10055266 - AluY SINE Alu -14 297 1 209 268 103 21 chr5 189574953 189575050 -10055100 - L2 LINE L2 0 3272 3168 212 146 0 83 chr5 189575052 189575100 -10055050 + MIR SINE MIR 106 149 -59 232 262 61 61 chr5 189575266 189575430 -10054720 + L1ME3 LINE L1 5726 5889 -232 * 238 364 67 12 chr5 189575419 189575584 -10054566 + L1ME4a LINE L1 5598 5771 -2037 350 237 259 7 chr5 189575671 189575770 -10054380 + MIR SINE MIR 74 147 -115 2104 119 6 3 chr5 189575770 189576082 -10054068 + AluSq SINE Alu 1 313 0 350 237 259 7 chr5 189576082 189576117 -10054033 + MIR SINE MIR 147 242 -20 * 601 268 104 36 chr5 189576092 189576152 -10053998 - MIR SINE MIR -21 241 187 2170 95 0 3 chr5 189576152 189576447 -10053703 + AluSg SINE Alu 1 294 -16 601 268 104 36 chr5 189576447 189576606 -10053544 - MIR SINE MIR -75 187 7 311 291 211 30 chr5 189577072 189577271 -10052879 + L1ME4a LINE L1 5881 6115 -6 413 309 67 0 chr5 189577833 189577982 -10052168 - MIR SINE MIR -72 190 32 2452 75 0 3 chr5 189578014 189578322 -10051828 + AluSx SINE Alu 1 307 -5 1080 252 81 48 chr5 189578389 189578809 -10051341 + LTR16A1 LTR ERVL 1 434 -23 2094 96 34 0 chr5 189579380 189579673 -10050477 + AluSq SINE Alu 1 303 -10 214 294 88 0 chr5 189579714 189579782 -10050368 + MIR SINE MIR 6 79 -183 260 309 43 13 chr5 189580815 189580950 -10049200 - MIR SINE MIR -62 146 12 4525 108 26 7 chr5 189581121 189581803 -10048347 + LTR17 LTR ERV1 1 695 -85 486 213 0 9 chr5 189582699 189582807 -10047343 + MIR SINE MIR 40 146 -116 838 221 53 22 chr5 189582820 189583046 -10047104 + L1ME3 LINE L1 5930 6162 0 214 290 32 0 chr5 189583052 189583114 -10047036 + GA-rich Low_complexity Low_complexity 5 68 0 327 145 0 0 chr5 189583182 189583251 -10046899 + (TG)n Simple_repeat Simple_repeat 1 69 0 694 231 65 23 chr5 189583364 189583580 -10046570 + MIR SINE MIR 37 261 -1 278 349 23 0 chr5 189583631 189583760 -10046390 - MIR SINE MIR -111 151 20 357 305 109 17 chr5 189585134 189585308 -10044842 + MIR SINE MIR 22 211 -51 1752 140 20 10 chr5 189585328 189585620 -10044530 + AluJo SINE Alu 18 312 0 1899 143 3 13 chr5 189586480 189586787 -10043363 - AluJo SINE Alu -8 304 1 2041 113 13 16 chr5 189587593 189587903 -10042247 + AluSx SINE Alu 1 309 -3 298 227 57 21 chr5 189587937 189588078 -10042072 + L2 LINE L2 2813 2958 -314 454 303 61 30 chr5 189588468 189588633 -10041517 - MIR3 SINE MIR -22 186 17 422 222 131 17 chr5 189588783 189588962 -10041188 + MIR SINE MIR 8 209 -53 2124 127 0 0 chr5 189589757 189590065 -10040085 - AluSx SINE Alu -4 308 1 425 267 92 0 chr5 189590501 189590632 -10039518 + Charlie8 DNA MER1_type 2 144 -2273 2077 100 38 0 chr5 189590860 189591151 -10038999 - AluSq SINE Alu -11 302 1 286 352 73 34 chr5 189591304 189591662 -10038488 + L2 LINE L2 2812 3183 -89 627 284 35 6 chr5 189591814 189591983 -10038167 + MIR SINE MIR 63 236 -26 312 340 87 5 chr5 189592372 189592557 -10037593 - MIR SINE MIR -14 248 49 2328 85 0 0 chr5 189592717 189593022 -10037128 + AluSg SINE Alu 1 305 -5 216 0 0 0 chr5 189593055 189593079 -10037071 + (A)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr5 189593106 189593134 -10037016 + AT_rich Low_complexity Low_complexity 1 28 0 222 94 0 0 chr5 189593247 189593279 -10036871 + (TA)n Simple_repeat Simple_repeat 2 33 0 441 0 0 0 chr5 189593279 189593328 -10036822 + (CA)n Simple_repeat Simple_repeat 2 50 0 228 377 57 0 chr5 189593345 189593467 -10036683 - L1MC4a LINE L1 -1849 5959 5831 2163 120 0 0 chr5 189593789 189594089 -10036061 + AluSq SINE Alu 2 301 -12 373 250 50 0 chr5 189594397 189594497 -10035653 + L2 LINE L2 3168 3272 0 361 268 9 19 chr5 189594725 189594843 -10035307 - MIR SINE MIR -84 124 8 332 386 28 0 chr5 189594869 189595014 -10035136 + L2 LINE L2 3121 3269 -3 198 0 0 0 chr5 189595149 189595171 -10034979 + (A)n Simple_repeat Simple_repeat 1 22 0 565 306 122 14 chr5 189595171 189595459 -10034691 + L1MC4a LINE L1 5606 5924 -1884 2299 98 0 3 chr5 189595495 189595790 -10034360 + AluSx SINE Alu 1 294 -18 330 167 45 0 chr5 189596163 189596229 -10033921 - MIR SINE MIR -72 136 68 215 286 105 38 chr5 189596504 189596609 -10033541 + MIR SINE MIR 35 146 -62 1957 221 87 4 chr5 189596646 189597188 -10032962 - L1MD3 LINE L1 0 7995 7409 327 218 92 0 chr5 189597188 189597275 -10032875 - MLT1F1 LTR MaLR -436 131 37 1428 157 26 0 chr5 189597283 189597513 -10032637 + MER46A DNA MER2_type 1 236 0 528 175 122 12 chr5 189597513 189597809 -10032341 - L1MD3 LINE L1 -883 7112 6735 2208 107 3 0 chr5 189597943 189598233 -10031917 - AluSq SINE Alu -22 291 1 204 216 0 0 chr5 189598357 189598394 -10031756 + CT-rich Low_complexity Low_complexity 4 40 0 2114 129 0 0 chr5 189598761 189599048 -10031102 - AluSx SINE Alu -15 297 11 467 288 40 8 chr5 189599074 189599199 -10030951 + L2 LINE L2 3184 3312 -1 553 325 21 11 chr5 189599629 189599817 -10030333 + MIR SINE MIR 18 207 -55 887 246 83 16 chr5 189600371 189600624 -10029526 + MIR SINE MIR 1 262 0 398 347 109 30 chr5 189600635 189600966 -10029184 - L2 LINE L2 -6 3266 2910 450 298 40 0 chr5 189601202 189601392 -10028758 - Charlie8 DNA MER1_type -2198 219 19 326 295 83 6 chr5 189601518 189601674 -10028476 + MIR3 SINE MIR 14 181 -27 1867 149 0 35 chr5 189601809 189602125 -10028025 + AluJo SINE Alu 8 312 0 2234 239 89 52 chr5 189602257 189602690 -10027460 + L1MC4a LINE L1 6442 6858 -950 1677 163 40 43 chr5 189602690 189602991 -10027159 + AluJo SINE Alu 10 309 -3 2234 239 89 52 chr5 189602991 189603259 -10026891 + L1MC4a LINE L1 6858 7115 -693 1826 130 22 11 chr5 189603259 189603536 -10026614 - AluJb SINE Alu -32 280 1 2234 239 89 52 chr5 189603536 189603728 -10026422 + L1MC4a LINE L1 7115 7298 -510 216 0 0 0 chr5 189603728 189603752 -10026398 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2234 239 89 52 chr5 189603752 189604086 -10026064 + L1MC4a LINE L1 7298 7808 0 815 185 0 7 chr5 189604154 189604289 -10025861 + FRAM SINE Alu 16 149 -27 183 80 0 0 chr5 189604294 189604319 -10025831 + (CAT)n Simple_repeat Simple_repeat 2 26 0 423 249 205 19 chr5 189604574 189604759 -10025391 - MIR SINE MIR -43 219 5 442 269 76 0 chr5 189604892 189605011 -10025139 - L2 LINE L2 0 3313 3186 2416 94 0 0 chr5 189605789 189606087 -10024063 - AluSx SINE Alu -10 302 5 802 171 0 0 chr5 189606318 189606441 -10023709 + FLAM_C SINE Alu 1 123 -20 912 176 0 24 chr5 189606642 189606812 -10023338 + MER45A DNA AcHobo 1 166 -12 277 273 57 11 chr5 189606910 189606998 -10023152 - MIR3 SINE MIR -52 156 65 450 316 21 36 chr5 189607511 189607704 -10022446 - L2 LINE L2 -43 3270 3081 282 278 212 7 chr5 189607690 189607841 -10022309 - MIR SINE MIR -8 254 73 * 203 336 44 36 chr5 189608059 189608196 -10021954 + MIR SINE MIR 29 166 -96 213 361 31 31 chr5 189608818 189608948 -10021202 + MIR SINE MIR 21 150 -58 289 254 249 10 chr5 189609528 189609737 -10020413 - MIR SINE MIR -2 260 2 183 254 34 17 chr5 189609747 189609806 -10020344 - MIR SINE MIR -183 79 20 31 0 0 0 chr5 189610714 189610745 -10019405 + GC_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 189610812 189610834 -10019316 + GC_rich Low_complexity Low_complexity 1 22 0 187 306 32 16 chr5 189610970 189611032 -10019118 + MIR SINE MIR 78 140 -68 199 299 72 88 chr5 189611156 189611350 -10018800 + MIR SINE MIR 39 229 -33 272 49 49 0 chr5 189612566 189612607 -10017543 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 215 226 57 19 chr5 189614308 189614361 -10015789 - MIR3 SINE MIR -53 155 101 810 157 0 15 chr5 189614512 189614646 -10015504 + FLAM_C SINE Alu 2 133 0 25 0 0 0 chr5 189614671 189614696 -10015454 + AT_rich Low_complexity Low_complexity 1 25 0 2386 62 0 49 chr5 189614751 189615059 -10015091 - AluY SINE Alu -18 293 1 2275 116 0 3 chr5 189615087 189615397 -10014753 + AluSc SINE Alu 1 309 0 350 233 37 98 chr5 189615441 189615604 -10014546 + LTR41 LTR ERVL 1 153 -620 966 212 25 0 chr5 189616197 189616400 -10013750 + MLT1E3 LTR MaLR 248 455 -169 883 159 0 0 chr5 189616411 189616543 -10013607 + FLAM_C SINE Alu 1 132 -1 2323 60 0 14 chr5 189617047 189617357 -10012793 - AluY SINE Alu 0 306 1 1662 203 80 28 chr5 189617459 189618107 -10012043 + L1M4 LINE L1 2506 3242 -2904 803 165 8 0 chr5 189618177 189618304 -10011846 + FLAM_C SINE Alu 6 133 -10 1608 199 76 52 chr5 189618315 189618813 -10011337 + L1M4 LINE L1 4430 4939 -1207 191 62 62 0 chr5 189618817 189618849 -10011301 + A-rich Low_complexity Low_complexity 2 35 0 292 296 84 84 chr5 189618986 189619391 -10010759 + L2 LINE L2 99 503 -2811 265 272 48 29 chr5 189619535 189619638 -10010512 + L2 LINE L2 2080 2184 -1130 754 133 7 44 chr5 189619640 189619775 -10010375 - MER20 DNA MER1_type -2 217 88 766 298 188 21 chr5 189619836 189620272 -10009878 + L2 LINE L2 2284 2792 -522 224 257 89 59 chr5 189620276 189620377 -10009773 - L2 LINE L2 -43 3270 3167 681 178 0 17 chr5 189620664 189620782 -10009368 - FLAM_A SINE Alu -26 116 1 805 154 0 0 chr5 189620863 189620980 -10009170 - AluJb SINE Alu -195 117 1 1759 203 118 36 chr5 189621035 189621671 -10008479 + L1MC5 LINE L1 7211 7898 -63 1919 130 4 0 chr5 189621704 189621973 -10008177 + AluSp SINE Alu 37 306 -7 265 57 0 0 chr5 189622040 189622075 -10008075 - Alu SINE Alu -257 42 8 245 105 26 0 chr5 189622484 189622522 -10007628 - Alu SINE Alu -149 154 116 201 68 182 0 chr5 189622532 189622576 -10007574 + L2 LINE L2 3262 3313 0 2349 104 0 0 chr5 189622685 189622984 -10007166 + AluSx SINE Alu 1 299 -13 1972 151 7 16 chr5 189624060 189624364 -10005786 + AluJo SINE Alu 1 301 -11 1875 146 28 0 chr5 189624541 189624828 -10005322 - AluSg SINE Alu -15 295 1 2069 134 3 16 chr5 189625050 189625363 -10004787 - AluSx SINE Alu -3 309 1 189 0 0 0 chr5 189625476 189625497 -10004653 + (A)n Simple_repeat Simple_repeat 1 21 0 1754 160 28 3 chr5 189625566 189625853 -10004297 - AluJb SINE Alu -18 294 1 2478 63 0 10 chr5 189625859 189626160 -10003990 - AluY SINE Alu -13 298 1 2257 79 0 43 chr5 189626162 189626467 -10003683 - AluY SINE Alu -19 292 1 1769 174 7 7 chr5 189626986 189627280 -10002870 + AluJb SINE Alu 3 296 -16 858 241 42 16 chr5 189627697 189627888 -10002262 - MIR SINE MIR -52 210 15 1835 169 10 7 chr5 189628310 189628611 -10001539 - AluJo SINE Alu -9 303 2 2362 84 3 0 chr5 189628801 189629097 -10001053 - AluSx SINE Alu -15 297 1 260 293 53 0 chr5 189629315 189629390 -10000760 - MIR SINE MIR -141 121 43 217 281 132 18 chr5 189629539 189629653 -10000497 + MIR SINE MIR 20 146 -116 205 80 0 100 chr5 189629755 189629768 -10000382 + (T)n Simple_repeat Simple_repeat 1 14 -31 1857 166 7 7 chr5 189629768 189630058 -10000092 + AluJb SINE Alu 1 290 -22 205 80 0 100 chr5 189630058 189630078 -10000072 + (T)n Simple_repeat Simple_repeat 14 30 -15 1594 113 128 12 chr5 189630078 189630335 -9999815 + AluSg SINE Alu 1 287 -23 205 80 0 100 chr5 189630335 189630350 -9999800 + (T)n Simple_repeat Simple_repeat 30 45 0 643 198 56 0 chr5 189630464 189630590 -9999560 - FLAM_C SINE Alu 0 133 1 754 178 8 0 chr5 189631106 189631224 -9998926 + AluJb SINE Alu 5 123 -189 328 255 66 66 chr5 189631910 189632012 -9998138 + MLT1L LTR MaLR 299 403 -212 2507 83 0 0 chr5 189632012 189632314 -9997836 + AluSc SINE Alu 1 302 -7 328 255 66 66 chr5 189632314 189632407 -9997743 + MLT1L LTR MaLR 402 494 -121 332 230 69 11 chr5 189632861 189632948 -9997202 + L1ME4a LINE L1 5853 5944 -177 1037 190 63 0 chr5 189632949 189633154 -9996996 - MER46A DNA MER2_type -3 233 16 244 189 19 19 chr5 189633160 189633213 -9996937 + (TATATG)n Simple_repeat Simple_repeat 4 56 0 336 195 69 46 chr5 189633214 189633301 -9996849 - L1MC4 LINE L1 -1340 6702 6614 321 276 74 65 chr5 189633254 189633541 -9996609 + L1ME4a LINE L1 5891 6702 0 * 198 0 0 0 chr5 189633628 189633650 -9996500 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 619 312 0 5 chr5 189635026 189635247 -9994903 + AluSc SINE Alu 48 267 -42 243 241 35 0 chr5 189635312 189635370 -9994780 + MLT1L LTR MaLR 430 489 -126 332 230 69 11 chr5 189635827 189635914 -9994236 + L1ME4a LINE L1 5853 5944 -177 1037 190 63 0 chr5 189635915 189636120 -9994030 - MER46A DNA MER2_type -3 233 16 244 189 19 19 chr5 189636126 189636179 -9993971 + (TATATG)n Simple_repeat Simple_repeat 4 56 0 336 195 69 46 chr5 189636180 189636267 -9993883 - L1MC4 LINE L1 -1340 6702 6614 321 276 74 65 chr5 189636220 189636507 -9993643 + L1ME4a LINE L1 5891 6702 0 * 636 124 0 10 chr5 189636594 189636713 -9993437 - AluSg/x SINE Alu 0 304 187 1437 111 10 5 chr5 189636832 189637031 -9993119 + AluSg/x SINE Alu 109 308 -4 311 262 280 18 chr5 189637157 189637325 -9992825 + MIR SINE MIR 37 248 -14 254 255 32 11 chr5 189637367 189637461 -9992689 - MER112 DNA MER1_type 0 260 165 1584 103 37 25 chr5 189637569 189637811 -9992339 + AluSx SINE Alu 60 304 -8 2015 124 13 7 chr5 189637865 189638163 -9991987 - AluSx SINE Alu -12 300 1 228 229 43 0 chr5 189638177 189638247 -9991903 - MER112 DNA MER1_type -183 77 5 974 235 67 104 chr5 189638634 189638826 -9991324 - MER113 DNA MER1_type? -29 492 294 1536 121 129 12 chr5 189638826 189639074 -9991076 + AluSg SINE Alu 1 277 -33 974 235 67 104 chr5 189639074 189639392 -9990758 - MER113 DNA MER1_type? -227 294 1 225 0 0 0 chr5 189639744 189639769 -9990381 + (T)n Simple_repeat Simple_repeat 1 25 0 2108 128 16 0 chr5 189639792 189640098 -9990052 + AluSq SINE Alu 3 313 0 402 301 29 22 chr5 189640405 189640541 -9989609 - MIR SINE MIR -12 250 114 * 704 280 94 27 chr5 189640537 189641052 -9989098 - L2 LINE L2 -1 3312 2750 468 308 115 4 chr5 189641543 189641777 -9988373 + MIR SINE MIR 2 261 -1 198 253 264 0 chr5 189641895 189641986 -9988164 + L2 LINE L2 3158 3272 0 322 247 21 11 chr5 189642292 189642385 -9987765 + MER91A DNA MER1_type 1 94 -102 200 242 30 30 chr5 189642486 189642552 -9987598 + MIR SINE MIR 109 174 -88 242 234 24 24 chr5 189644234 189644358 -9985792 + (TTGG)n Simple_repeat Simple_repeat 3 126 0 246 217 0 70 chr5 189644447 189644562 -9985588 + (TTGTG)n Simple_repeat Simple_repeat 3 109 0 732 96 0 10 chr5 189645131 189645235 -9984915 + AluSc SINE Alu 189 291 -18 879 144 0 0 chr5 189645491 189645616 -9984534 - FLAM_C SINE Alu -8 125 1 1820 162 0 56 chr5 189645636 189645957 -9984193 + AluJo SINE Alu 1 303 -9 23 0 0 0 chr5 189645957 189645980 -9984170 + AT_rich Low_complexity Low_complexity 1 23 0 646 335 143 40 chr5 189645980 189646894 -9983256 - L2 LINE L2 -756 2558 1508 2038 149 0 7 chr5 189646894 189647196 -9982954 - AluSx SINE Alu -12 300 1 646 335 143 40 chr5 189647196 189647393 -9982757 - L2 LINE L2 -1806 1508 1333 2534 79 0 0 chr5 189647512 189647816 -9982334 + AluSq SINE Alu 1 304 -9 698 148 0 0 chr5 189647824 189647932 -9982218 + FLAM_C SINE Alu 2 109 -34 225 0 0 0 chr5 189647938 189647963 -9982187 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr5 189647968 189647993 -9982157 + AT_rich Low_complexity Low_complexity 1 25 0 342 240 91 71 chr5 189648066 189648220 -9981930 - L2 LINE L2 -1 3312 3156 376 206 148 77 chr5 189648222 189648377 -9981773 + L1ME2 LINE L1 5998 6163 -1 541 289 101 4 chr5 189648452 189648712 -9981438 - L2 LINE L2 -219 3053 2770 2159 100 18 0 chr5 189648722 189649001 -9981149 - AluSx SINE Alu -28 284 1 233 218 271 23 chr5 189649043 189649176 -9980974 + L2 LINE L2 2984 3149 -164 293 114 0 0 chr5 189649183 189649227 -9980923 - L1ME3 LINE L1 -1 6161 6118 2490 86 3 0 chr5 189649257 189649561 -9980589 - AluY SINE Alu -6 305 1 2187 108 0 3 chr5 189649562 189649872 -9980278 - AluSx SINE Alu 0 312 1 538 268 50 103 chr5 189649980 189650357 -9979793 - L2 LINE L2 -768 2546 2190 425 305 108 10 chr5 189650407 189650610 -9979540 - L2 LINE L2 -1379 1935 1713 349 285 53 40 chr5 189650614 189650765 -9979385 + Charlie8 DNA MER1_type 119 271 -2146 1202 105 19 72 chr5 189651031 189651240 -9978910 + MER20 DNA MER1_type 22 219 0 275 260 281 0 chr5 189651242 189651338 -9978812 + L2 LINE L2 3191 3313 0 972 108 0 8 chr5 189651684 189651814 -9978336 + FLAM_C SINE Alu 5 133 -10 24 53 0 0 chr5 189651842 189651880 -9978270 + AT_rich Low_complexity Low_complexity 1 38 0 2638 31 0 0 chr5 189652858 189653152 -9976998 - AluY SINE Alu -13 298 5 211 242 0 32 chr5 189653599 189653661 -9976489 + (TTTCG)n Simple_repeat Simple_repeat 1 60 0 207 214 0 0 chr5 189653662 189653732 -9976418 + T-rich Low_complexity Low_complexity 1 70 0 279 323 31 15 chr5 189654457 189654587 -9975563 + MIR SINE MIR 20 151 -111 712 233 65 19 chr5 189654638 189654853 -9975297 - MIR SINE MIR -1 261 37 255 164 0 0 chr5 189654966 189655027 -9975123 + (CA)n Simple_repeat Simple_repeat 1 61 0 239 274 32 0 chr5 189655095 189655157 -9974993 + CT-rich Low_complexity Low_complexity 5 68 0 829 221 53 22 chr5 189655163 189655389 -9974761 - L1ME3 LINE L1 0 6162 5930 484 213 0 9 chr5 189655402 189655510 -9974640 - MIR SINE MIR -116 146 40 4475 108 26 7 chr5 189656407 189657089 -9973061 - LTR17 LTR ERV1 -85 695 1 266 287 43 0 chr5 189657301 189657395 -9972755 + MIR SINE MIR 48 145 -117 2424 72 7 0 chr5 189658280 189658573 -9971577 + AluSx SINE Alu 1 295 -17 332 300 233 35 chr5 189658593 189658966 -9971184 + L2 LINE L2 2863 3309 -4 827 230 10 30 chr5 189659054 189659252 -9970898 + MLT1D LTR MaLR 1 194 -311 397 70 0 18 chr5 189659252 189659309 -9970841 + Alu SINE Alu 1 56 -246 308 286 154 23 chr5 189659687 189659862 -9970288 + L1 LINE L1 3029 3226 -2920 22 56 0 0 chr5 189662856 189662892 -9967258 + AT_rich Low_complexity Low_complexity 1 36 0 207 0 0 0 chr5 189663086 189663109 -9967041 + (A)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr5 189664023 189664046 -9966104 + (A)n Simple_repeat Simple_repeat 1 23 0 637 118 102 0 chr5 189669924 189670051 -9960099 - AluSq/x SINE Alu -171 141 2 1954 128 3 31 chr5 189670064 189670232 -9959918 - AluSx SINE Alu 0 301 143 2348 73 0 7 chr5 189670232 189670560 -9959590 - AluY SINE Alu 0 311 1 1954 128 3 31 chr5 189670560 189670700 -9959450 - AluSx SINE Alu -158 143 1 2363 76 0 17 chr5 189670853 189671155 -9958995 + AluY SINE Alu 1 297 -14 1906 146 6 43 chr5 189671179 189671502 -9958648 + AluJb SINE Alu 1 311 -1 2177 122 0 10 chr5 189671551 189671908 -9958242 - AluSx SINE Alu 0 312 1 1838 160 11 3 chr5 189672132 189672419 -9957731 + AluJo SINE Alu 1 289 -23 1412 145 157 8 chr5 189672432 189672680 -9957470 - AluJo SINE Alu -27 285 1 1895 137 10 13 chr5 189672890 189673189 -9956961 + AluJb SINE Alu 15 312 0 337 314 39 19 chr5 189675002 189675158 -9954992 - MIR3 SINE MIR 0 208 50 2373 82 20 0 chr5 189675160 189675453 -9954697 - AluSg SINE Alu -11 299 1 191 196 36 71 chr5 189675536 189675592 -9954558 + MIR SINE MIR 98 151 -57 385 286 71 29 chr5 189675871 189676011 -9954139 + MIR SINE MIR 47 192 -70 2255 99 10 7 chr5 189676175 189676479 -9953671 - AluSq SINE Alu -8 305 1 2109 139 0 0 chr5 189677070 189677205 -9952945 + AluSx SINE Alu 1 135 -177 2459 83 3 0 chr5 189677205 189677506 -9952644 + AluSp SINE Alu 1 302 -11 2109 139 0 0 chr5 189677506 189677671 -9952479 + AluSx SINE Alu 134 301 -11 308 184 7 0 chr5 189678150 189678275 -9951875 + L1ME4a LINE L1 5957 6121 0 327 247 56 0 chr5 189679282 189679371 -9950779 - MER5A DNA MER1_type -80 109 16 2180 121 0 20 chr5 189679523 189679829 -9950321 + AluSx SINE Alu 4 303 -9 237 321 109 23 chr5 189679866 189680087 -9950063 - L2 LINE L2 -676 2638 2399 1943 194 51 137 chr5 189680116 189680194 -9949956 - LTR8 LTR ERV1 -8 683 600 2390 78 10 0 chr5 189680194 189680488 -9949662 - AluY SINE Alu -14 297 1 1943 194 51 137 chr5 189680488 189680578 -9949572 - LTR8 LTR ERV1 -91 600 504 2200 97 4 0 chr5 189680578 189680889 -9949261 - AluSc SINE Alu 0 312 1 1943 194 51 137 chr5 189680889 189680902 -9949248 - LTR8 LTR ERV1 -187 504 491 2261 62 37 4 chr5 189680902 189681199 -9948951 - AluY SINE Alu 0 306 1 1943 194 51 137 chr5 189681199 189681760 -9948390 - LTR8 LTR ERV1 -200 491 1 310 330 67 22 chr5 189681776 189682046 -9948104 - L2 LINE L2 -953 2361 2080 2319 94 3 7 chr5 189682415 189682713 -9947437 - AluSx SINE Alu -15 297 1 2354 116 0 0 chr5 189682713 189683014 -9947136 - AluSq SINE Alu -10 303 3 436 206 47 0 chr5 189683018 189683125 -9947025 - MIR SINE MIR -37 225 114 930 169 153 22 chr5 189683139 189683408 -9946742 - LTR54 LTR ERV1 0 510 238 1118 43 0 103 chr5 189683408 189683641 -9946509 + AluY SINE Alu 1 209 -102 818 143 55 50 chr5 189683999 189684092 -9946058 - LTR54 LTR ERV1 -327 183 87 2466 72 13 0 chr5 189684092 189684396 -9945754 - AluSp SINE Alu -5 308 1 818 143 55 50 chr5 189684396 189684484 -9945666 - LTR54 LTR ERV1 -423 87 1 586 127 5 222 chr5 189685561 189685668 -9944482 + MER45A DNA AcHobo 31 81 -1500 2175 95 0 11 chr5 189685668 189685816 -9944334 - AluSp SINE Alu -32 281 136 2553 69 0 0 chr5 189685816 189686120 -9944030 - AluY SINE Alu -7 304 1 2175 95 0 11 chr5 189686120 189686255 -9943895 - AluSp SINE Alu -177 136 1 586 127 5 222 chr5 189686255 189686336 -9943814 + MER45A DNA AcHobo 81 178 0 1932 107 0 33 chr5 189686525 189686796 -9943354 - AluSg SINE Alu -48 262 1 184 250 0 0 chr5 189686797 189686837 -9943313 - MIR SINE MIR 0 262 223 2225 166 241 48 chr5 189686860 189687552 -9942598 + LTR1B LTR ERV1 1 826 0 2784 158 52 53 chr5 189687552 189687951 -9942199 - LTR26E LTR ERV1 -4 618 220 1940 124 57 0 chr5 189687951 189688234 -9941916 - AluSq SINE Alu -14 299 1 2784 158 52 53 chr5 189688234 189688332 -9941818 - LTR26E LTR ERV1 -402 220 123 2396 98 0 0 chr5 189688332 189688629 -9941521 - AluSx SINE Alu -15 297 1 2784 158 52 53 chr5 189688629 189688749 -9941401 - LTR26E LTR ERV1 -499 123 1 2282 87 3 3 chr5 189689092 189689406 -9940744 - AluSp SINE Alu 0 314 1 1934 144 43 0 chr5 189689407 189689684 -9940466 - AluJo SINE Alu -23 289 1 2043 114 7 10 chr5 189690703 189691002 -9939148 - AluSg SINE Alu -12 298 1 802 160 30 0 chr5 189691004 189691135 -9939015 - AluJb SINE Alu -177 135 1 180 139 329 51 chr5 189691164 189691243 -9938907 - MIR SINE MIR -72 190 90 250 235 0 0 chr5 189691344 189691395 -9938755 + L2 LINE L2 3136 3186 -86 559 137 88 0 chr5 189692010 189692112 -9938038 - HY1 scRNA scRNA -1 111 1 2349 85 0 53 chr5 189692119 189692438 -9937712 - AluSq SINE Alu -11 302 1 21 0 0 0 chr5 189693193 189693214 -9936936 + AT_rich Low_complexity Low_complexity 1 21 0 2530 71 0 0 chr5 189693220 189693529 -9936621 + AluY SINE Alu 1 309 -2 596 212 185 16 chr5 189694518 189694702 -9935448 - MIR SINE MIR -2 260 46 209 235 216 10 chr5 189694703 189694805 -9935345 - L2 LINE L2 -4 3268 3146 469 306 44 0 chr5 189695023 189695192 -9934958 + MIR SINE MIR 22 198 -64 30 0 0 0 chr5 189696144 189696174 -9933976 + GC_rich Low_complexity Low_complexity 1 30 0 250 223 21 32 chr5 189696424 189696591 -9933559 + G-rich Low_complexity Low_complexity 1 165 0 2542 36 0 13 chr5 189698037 189698341 -9931809 - AluY SINE Alu -11 300 1 2297 90 3 10 chr5 189698343 189698653 -9931497 - AluSx SINE Alu -4 308 1 2591 61 3 0 chr5 189698803 189699115 -9931035 - AluSq SINE Alu 0 313 1 29 28 0 0 chr5 189699748 189699784 -9930366 + AT_rich Low_complexity Low_complexity 1 36 0 2074 140 0 0 chr5 189699785 189700078 -9930072 - AluSx SINE Alu -15 297 5 731 245 17 56 chr5 189700260 189700493 -9929657 - MER58A DNA MER1_type 0 224 1 2172 113 0 0 chr5 189700516 189700817 -9929333 - AluSg SINE Alu -9 301 1 340 315 94 0 chr5 189701751 189701900 -9928250 + L2 LINE L2 3110 3272 0 2766 20 0 0 chr5 189702295 189702598 -9927552 - AluYa5 SINE Alu -8 303 1 2224 115 0 3 chr5 189702915 189703220 -9926930 - AluSx SINE Alu -8 304 1 2114 114 10 13 chr5 189703265 189703572 -9926578 - AluSx SINE Alu -6 306 1 1099 158 0 107 chr5 189703913 189704001 -9926149 - AluJb SINE Alu -103 209 113 2269 90 13 0 chr5 189704001 189704301 -9925849 - AluSp SINE Alu -9 304 1 1099 158 0 107 chr5 189704301 189704446 -9925704 - AluJb SINE Alu -199 113 1 1579 159 107 0 chr5 189705071 189705374 -9924776 - AluJb SINE Alu 0 332 1 714 197 24 0 chr5 189705416 189705543 -9924607 - FLAM_A SINE Alu -3 139 10 1314 245 78 40 chr5 189705936 189706247 -9923903 - L1ME1 LINE L1 -5 6161 5833 1797 160 10 0 chr5 189706247 189706541 -9923609 - AluJb SINE Alu -5 307 11 1314 245 78 40 chr5 189706541 189706734 -9923416 - L1ME1 LINE L1 -333 5833 5649 355 250 60 97 chr5 189706836 189707052 -9923098 - Charlie8 DNA MER1_type -2128 289 82 2378 71 0 10 chr5 189707154 189707450 -9922700 + AluY SINE Alu 1 293 -18 2278 84 0 23 chr5 189708226 189708536 -9921614 + AluSx SINE Alu 1 303 -9 226 287 106 11 chr5 189708619 189708713 -9921437 - MIR SINE MIR 0 262 160 1932 118 61 24 chr5 189708769 189709065 -9921085 - AluSx SINE Alu -5 307 1 1861 140 39 3 chr5 189709351 189709637 -9920513 - AluSx SINE Alu -16 296 1 24 0 0 0 chr5 189709935 189709959 -9920191 + AT_rich Low_complexity Low_complexity 1 24 0 180 219 0 0 chr5 189710214 189710255 -9919895 + L2 LINE L2 3271 3311 -2 2113 121 7 0 chr5 189710656 189710954 -9919196 - AluSq SINE Alu -13 300 1 850 159 0 8 chr5 189710957 189711089 -9919061 - AluJo/FLAM SINE Alu -171 131 1 59 21 0 21 chr5 189711186 189711218 -9918932 + AT_rich Low_complexity Low_complexity 1 32 -61 1772 157 11 7 chr5 189711218 189711505 -9918645 + AluJb SINE Alu 1 288 -24 59 21 0 21 chr5 189711505 189711552 -9918598 + AT_rich Low_complexity Low_complexity 32 80 -13 1691 152 0 63 chr5 189711552 189711715 -9918435 - AluJo SINE Alu -14 298 161 2268 102 0 3 chr5 189711715 189712020 -9918130 - AluY SINE Alu -7 304 1 1691 152 0 63 chr5 189712020 189712158 -9917992 - AluJo SINE Alu -151 161 16 59 21 0 21 chr5 189712158 189712172 -9917978 + AT_rich Low_complexity Low_complexity 80 93 0 212 243 100 29 chr5 189712662 189712732 -9917418 + MIR SINE MIR 70 144 -118 2304 65 0 4 chr5 189713130 189713409 -9916741 + AluSc SINE Alu 1 278 -31 191 59 0 29 chr5 189713412 189713446 -9916704 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2083 124 7 0 chr5 189713457 189713755 -9916395 + AluSq SINE Alu 1 300 -13 25 0 0 0 chr5 189714023 189714048 -9916102 + AT_rich Low_complexity Low_complexity 1 25 0 2231 123 7 0 chr5 189714048 189714358 -9915792 - AluSx SINE Alu 0 312 1 443 244 25 19 chr5 189715138 189715298 -9914852 + CT-rich Low_complexity Low_complexity 3 163 0 331 197 14 0 chr5 189715305 189715376 -9914774 - MSTD LTR MaLR 0 457 386 997 129 0 0 chr5 189715377 189715509 -9914641 + FLAM_C SINE Alu 2 133 0 871 227 230 28 chr5 189715515 189715806 -9914344 - MSTD LTR MaLR -46 350 1 2024 110 20 20 chr5 189715903 189716204 -9913946 + AluSx SINE Alu 1 301 -11 2139 115 3 10 chr5 189716383 189716679 -9913471 - AluSg SINE Alu -16 294 1 3461 157 78 22 chr5 189716718 189716839 -9913311 - L1MB4 LINE L1 -3 6177 6064 2107 117 3 3 chr5 189716839 189717129 -9913021 - AluSx SINE Alu -22 290 1 3461 157 78 22 chr5 189717129 189717695 -9912455 - L1MB4 LINE L1 -116 6064 5451 35 24 0 0 chr5 189717895 189717937 -9912213 + AT_rich Low_complexity Low_complexity 1 42 0 1632 114 128 15 chr5 189717987 189718260 -9911890 - AluSg1 SINE Alu -5 304 1 1136 134 0 23 chr5 189718753 189718925 -9911225 + AluSg/x SINE Alu 136 303 -7 713 182 147 35 chr5 189719059 189719229 -9910921 - MER5A DNA MER1_type 0 189 1 1852 117 64 3 chr5 189721076 189721359 -9908791 + AluSg SINE Alu 1 300 -10 2566 60 0 0 chr5 189721440 189721742 -9908408 - AluY SINE Alu -9 302 1 2304 96 3 3 chr5 189722075 189722378 -9907772 + AluSx SINE Alu 9 311 -1 1879 110 72 21 chr5 189722378 189722669 -9907481 + AluSx SINE Alu 3 308 -4 2397 78 0 28 chr5 189724056 189724375 -9905775 - AluY SINE Alu -1 310 1 2203 125 0 0 chr5 189724377 189724673 -9905477 - AluSq SINE Alu -17 296 1 2453 85 0 0 chr5 189724841 189725147 -9905003 - AluSq SINE Alu -7 306 1 2111 144 0 13 chr5 189726198 189726374 -9903776 - AluSx SINE Alu -3 309 137 2233 105 0 7 chr5 189726374 189726678 -9903472 - AluSx SINE Alu -10 302 1 2111 144 0 13 chr5 189726678 189726814 -9903336 - AluSx SINE Alu -175 137 1 2036 110 28 0 chr5 189726847 189727129 -9903021 + AluSc SINE Alu 1 290 -19 518 108 0 0 chr5 189727137 189727202 -9902948 + AluS SINE Alu 3 67 -245 222 37 0 0 chr5 189727246 189727273 -9902877 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1973 75 29 32 chr5 189727275 189727554 -9902596 - AluSg SINE Alu -32 278 1 566 99 0 0 chr5 189727692 189727773 -9902377 - AluSp/q SINE Alu 0 313 233 272 98 0 24 chr5 189727773 189727814 -9902336 + AluSq SINE Alu 130 169 -134 601 74 0 0 chr5 189728055 189728136 -9902014 - AluSp/q SINE Alu 0 313 233 1403 81 0 0 chr5 189728136 189728308 -9901842 + AluSq SINE Alu 130 301 -12 403 222 0 10 chr5 189728587 189728686 -9901464 + L1MB8 LINE L1 6079 6176 -2 2289 98 7 7 chr5 189728698 189729003 -9901147 + AluSg1 SINE Alu 1 305 -4 212 59 29 0 chr5 189729005 189729039 -9901111 + (CA)n Simple_repeat Simple_repeat 1 35 0 303 315 55 28 chr5 189729143 189729324 -9900826 - L1MC4a LINE L1 -1827 5981 5796 844 127 0 16 chr5 189729349 189729475 -9900675 + AluSq/x SINE Alu 10 133 -179 23 0 0 0 chr5 189729890 189729913 -9900237 + AT_rich Low_complexity Low_complexity 1 23 0 259 262 0 41 chr5 189731041 189731186 -9898964 + (ATG)n Simple_repeat Simple_repeat 2 140 0 35 24 0 0 chr5 189731422 189731464 -9898686 + AT_rich Low_complexity Low_complexity 1 42 0 2056 137 13 0 chr5 189731603 189731910 -9898240 + AluSp SINE Alu 1 311 -2 11623 158 38 77 chr5 189733127 189733331 -9896819 - L1MA9 LINE L1 -5 7726 7516 1664 196 0 0 chr5 189733331 189733617 -9896533 - AluJb SINE Alu -26 286 1 11623 158 38 77 chr5 189733617 189734984 -9895166 - L1MA9 LINE L1 -215 7516 6097 2559 56 0 3 chr5 189734984 189735289 -9894861 - AluY SINE Alu -7 304 1 11623 158 38 77 chr5 189735289 189735776 -9894374 - L1MA9 LINE L1 -1634 6097 5592 2358 72 3 3 chr5 189735776 189736069 -9894081 - AluY SINE Alu -18 293 1 11623 158 38 77 chr5 189736069 189737036 -9893114 - L1MA9 LINE L1 -2139 5592 4588 2116 126 3 0 chr5 189737036 189737330 -9892820 - AluSx SINE Alu -17 295 1 11623 158 38 77 chr5 189737330 189737965 -9892185 - L1MA9 LINE L1 -3143 4588 4254 1821 76 4 4 chr5 189737965 189738201 -9891949 - AluY SINE Alu -5 306 71 11623 158 38 77 chr5 189738201 189738653 -9891497 - L1MA9 LINE L1 -3477 4254 3786 849 206 0 18 chr5 189738654 189738819 -9891331 - AluJb SINE Alu -5 307 146 2348 236 134 57 chr5 189738819 189738945 -9891205 - L1MA9 LINE L1 -3764 3801 3686 1942 169 0 0 chr5 189738945 189739240 -9890910 - AluJb SINE Alu -17 295 1 2348 236 134 57 chr5 189739240 189739677 -9890473 - L1MA9 LINE L1 -3879 3686 3284 1922 113 0 136 chr5 189739677 189739863 -9890287 - AluSx SINE Alu -4 298 179 420 20 0 0 chr5 189739863 189739912 -9890238 + (TG)n Simple_repeat Simple_repeat 2 50 0 1922 113 0 136 chr5 189739912 189740070 -9890080 - AluSx SINE Alu -123 179 1 2348 236 134 57 chr5 189740070 189740215 -9889935 - L1MA9 LINE L1 -4281 3284 3152 2248 96 3 7 chr5 189740215 189740516 -9889634 - AluSx SINE Alu -8 304 5 2348 236 134 57 chr5 189740516 189740645 -9889505 - L1MA9 LINE L1 -4413 3152 3034 718 246 0 8 chr5 189740645 189740779 -9889371 - FLAM_A SINE Alu 0 133 1 2348 236 134 57 chr5 189740779 189740858 -9889292 - L1MA9 LINE L1 -4531 3034 2962 1668 175 31 7 chr5 189740858 189741150 -9889000 - AluJo SINE Alu -13 299 1 2348 236 134 57 chr5 189741150 189741341 -9888809 - L1MA9 LINE L1 -4603 2962 2787 2335 74 14 10 chr5 189741341 189741638 -9888512 - AluSx SINE Alu -14 298 1 2348 236 134 57 chr5 189741638 189741915 -9888235 - L1MA9 LINE L1 -4778 2787 2309 2298 221 125 31 chr5 189741913 189742682 -9887468 - L1M3e LINE L1 -4919 2111 1271 * 347 230 50 50 chr5 189743949 189744049 -9886101 - L2 LINE L2 -15 3298 3199 236 305 42 8 chr5 189744051 189744169 -9885981 + MER103 DNA DNA 45 166 0 1771 174 7 3 chr5 189744325 189744612 -9885538 + AluJo SINE Alu 1 288 -24 270 0 0 0 chr5 189744638 189744668 -9885482 + (GA)n Simple_repeat Simple_repeat 2 31 0 330 87 0 0 chr5 189745137 189745183 -9884967 + (TG)n Simple_repeat Simple_repeat 2 47 0 1956 116 18 4 chr5 189745392 189745690 -9884460 - AluSg SINE Alu 0 302 1 1102 69 0 0 chr5 189745713 189745844 -9884306 - AluY SINE Alu -180 131 1 2121 85 0 70 chr5 189746074 189746390 -9883760 + AluY SINE Alu 1 294 -17 941 185 134 36 chr5 189746511 189746677 -9883473 - L1ME1 LINE L1 -5 6161 5998 2204 99 0 0 chr5 189746677 189746997 -9883153 - AluSq SINE Alu 0 320 1 941 185 134 36 chr5 189746997 189747101 -9883049 - L1ME1 LINE L1 -168 5998 5906 811 127 15 22 chr5 189747640 189747765 -9882385 + AluJo SINE Alu 1 126 -186 2115 115 6 25 chr5 189747765 189748079 -9882071 - AluSx SINE Alu -4 308 1 36 23 0 0 chr5 189748087 189748130 -9882020 + AT_rich Low_complexity Low_complexity 1 43 0 740 220 92 0 chr5 189749290 189749431 -9880719 + AluJo SINE Alu 137 290 -12 515 226 30 24 chr5 189750925 189750943 -9879207 - L1MA10 LINE L1 -1 6333 6316 2936 185 61 62 chr5 189750943 189751229 -9878921 - L1ME1 LINE L1 -6 6160 5875 1342 136 198 4 chr5 189751229 189751472 -9878678 - AluSg1 SINE Alu -19 290 1 2936 185 61 62 chr5 189751472 189751908 -9878242 - L1ME1 LINE L1 -291 5875 5439 812 181 0 22 chr5 189752070 189752208 -9877942 + AluJo SINE Alu 2 136 -176 330 348 21 14 chr5 189752797 189752938 -9877212 - MER5A DNA MER1_type -2 187 46 1638 202 0 7 chr5 189752940 189753242 -9876908 - AluJb SINE Alu -12 300 1 2268 112 3 0 chr5 189753249 189753553 -9876597 - AluSx SINE Alu -5 307 3 2391 96 3 3 chr5 189755041 189755354 -9874796 - AluSp SINE Alu 0 313 1 2074 47 120 22 chr5 189755583 189755857 -9874293 - AluY SINE Alu -10 301 1 545 227 118 17 chr5 189755966 189756085 -9874065 + FLAM_A SINE Alu 2 132 -1 3568 211 33 32 chr5 189756181 189757044 -9873106 - L1ME1 LINE L1 -5 6161 5298 2135 128 3 3 chr5 189757044 189757341 -9872809 + AluSq SINE Alu 1 297 -16 3568 211 33 32 chr5 189757341 189757392 -9872758 - L1ME1 LINE L1 -868 5298 5249 188 88 59 0 chr5 189757422 189757456 -9872694 + CT-rich Low_complexity Low_complexity 3 38 0 206 207 17 0 chr5 189757559 189757617 -9872533 + CT-rich Low_complexity Low_complexity 2 60 0 1997 104 0 29 chr5 189757625 189757764 -9872386 - AluSx SINE Alu -40 272 143 2489 67 0 3 chr5 189757764 189758061 -9872089 - AluY SINE Alu -15 296 1 1997 104 0 29 chr5 189758061 189758201 -9871949 - AluSx SINE Alu -169 143 1 1303 259 31 14 chr5 189758206 189758623 -9871527 - L1ME1 LINE L1 -961 5185 4762 817 129 7 90 chr5 189758646 189758801 -9871349 + FLAM_C SINE Alu 2 143 0 704 133 95 0 chr5 189758808 189758913 -9871237 - FLAM_C SINE Alu -18 115 1 3872 221 91 77 chr5 189758948 189760257 -9869893 - L1ME1 LINE L1 -1377 4769 3480 2172 122 0 10 chr5 189760257 189760569 -9869581 - AluSx SINE Alu 0 312 4 2207 118 10 0 chr5 189760575 189760880 -9869270 - AluSq SINE Alu -5 308 1 3872 221 91 77 chr5 189760880 189761214 -9868936 - L1ME1 LINE L1 -2670 3476 3096 2379 82 0 0 chr5 189761216 189761509 -9868641 - AluY SINE Alu -18 293 1 205 211 0 88 chr5 189761596 189761653 -9868497 - L2 LINE L2 -1 3271 3220 883 202 12 18 chr5 189761748 189761916 -9868234 - FAM SINE Alu -8 167 1 1874 150 3 3 chr5 189761960 189762288 -9867862 - AluSx SINE Alu 0 328 1 3500 40 0 5 chr5 189762427 189762883 -9867267 - L1PA3 LINE L1 0 6155 5758 610 275 37 58 chr5 189764035 189764163 -9865987 - HAL1b LINE L1 -809 539 410 2034 107 76 7 chr5 189764163 189764453 -9865697 + AluSg SINE Alu 1 310 0 610 275 37 58 chr5 189764453 189764619 -9865531 - HAL1b LINE L1 -938 410 251 1835 132 0 4 chr5 189764725 189765035 -9865115 - AluSx SINE Alu 0 356 48 2333 89 0 3 chr5 189765447 189765750 -9864400 + AluSc SINE Alu 3 304 -5 724 215 23 0 chr5 189765758 189765888 -9864262 + FLAM_A SINE Alu 1 133 0 2208 114 0 0 chr5 189766004 189766302 -9863848 - AluSx SINE Alu -14 298 1 794 171 0 140 chr5 189766767 189766960 -9863190 + AluJb SINE Alu 137 302 -10 1744 142 73 0 chr5 189767014 189767303 -9862847 - AluSx SINE Alu -2 310 1 2449 93 0 0 chr5 189767306 189767616 -9862534 - AluSg SINE Alu 0 310 1 506 288 157 70 chr5 189767753 189768620 -9861530 - L1M4 LINE L1 -2948 3198 2257 2225 71 0 0 chr5 189768620 189768935 -9861215 - AluY SINE Alu 0 315 1 2556 52 0 7 chr5 189768962 189769268 -9860882 - AluY SINE Alu -7 304 1 1764 161 20 13 chr5 189769292 189769590 -9860560 + AluJo SINE Alu 1 300 -12 2344 95 7 0 chr5 189769668 189769974 -9860176 - AluSg SINE Alu -2 308 1 1583 134 53 63 chr5 189770383 189770552 -9859598 - AluJo SINE Alu -16 296 130 1927 140 26 16 chr5 189770552 189770860 -9859290 - AluSx SINE Alu -1 311 1 1583 134 53 63 chr5 189770860 189770989 -9859161 - AluJo SINE Alu -182 130 1 1393 245 138 27 chr5 189770990 189771541 -9858609 - L1MC4 LINE L1 -81 7961 7350 324 0 0 0 chr5 189771549 189771585 -9858565 + (CA)n Simple_repeat Simple_repeat 2 37 0 2047 138 3 0 chr5 189771585 189771883 -9858267 - AluSg SINE Alu -11 299 1 2343 105 0 3 chr5 189771935 189772240 -9857910 - AluSq SINE Alu -9 304 1 776 43 14 43 chr5 189772254 189772393 -9857757 + (TCCCC)n Simple_repeat Simple_repeat 4 138 0 1884 113 3 107 chr5 189772501 189772837 -9857313 - AluSp SINE Alu -12 301 1 282 29 0 0 chr5 189774159 189774194 -9855956 + (TA)n Simple_repeat Simple_repeat 2 36 0 186 133 0 0 chr5 189774642 189774672 -9855478 + (A)n Simple_repeat Simple_repeat 1 30 0 23 0 0 0 chr5 189777585 189777608 -9852542 + AT_rich Low_complexity Low_complexity 1 23 0 297 247 27 14 chr5 189779670 189779743 -9850407 - L2 LINE L2 -6 3307 3234 258 246 8 49 chr5 189781028 189781150 -9849000 + L1MC/D LINE L1 4407 4523 -1623 21 0 0 0 chr5 189781188 189781209 -9848941 + AT_rich Low_complexity Low_complexity 1 21 0 515 296 49 27 chr5 189781364 189781696 -9848454 + L1MC/D LINE L1 4735 5064 -1082 1040 279 97 11 chr5 189781873 189782224 -9847926 + L1MC/D LINE L1 5254 5634 -2174 435 210 30 20 chr5 189782261 189782361 -9847789 + MIR SINE MIR 160 260 -2 456 238 171 36 chr5 189782368 189782561 -9847589 - MIR SINE MIR 0 262 44 2558 61 3 10 chr5 189782745 189783058 -9847092 - AluY SINE Alu 0 311 1 242 210 91 119 chr5 189783060 189783203 -9846947 + MIR SINE MIR 63 201 -61 2291 92 14 0 chr5 189783203 189783498 -9846652 + AluSg SINE Alu 1 299 -11 209 344 31 0 chr5 189783858 189783954 -9846196 - L2 LINE L2 -556 2758 2660 227 248 149 28 chr5 189784027 189784168 -9845982 - L1ME4a LINE L1 -22 6099 5942 317 286 134 76 chr5 189784759 189784983 -9845167 + L1M2 LINE L1 1157 1393 -5456 2498 42 3 10 chr5 189785297 189785607 -9844543 - AluY SINE Alu -3 308 1 612 241 128 30 chr5 189786022 189786225 -9843925 - MIR SINE MIR -13 249 27 2525 50 3 0 chr5 189787029 189787327 -9842823 + AluY SINE Alu 1 299 -12 1683 123 8 0 chr5 189787752 189787988 -9842162 + AluSg/x SINE Alu 66 303 -9 486 0 0 0 chr5 189787988 189788042 -9842108 + (TA)n Simple_repeat Simple_repeat 2 55 0 699 177 0 26 chr5 189788042 189788155 -9841995 - FLAM_C SINE Alu -20 123 14 2299 120 63 23 chr5 189789091 189789441 -9840709 - THE1B LTR MaLR 0 364 1 1345 126 30 7 chr5 189789490 189789858 -9840292 - MSTB LTR MaLR 0 426 1 2120 137 3 0 chr5 189789881 189790180 -9839970 + AluSx SINE Alu 1 300 -12 248 244 55 63 chr5 189790591 189790718 -9839432 - L1MC4a LINE L1 -1785 6023 5898 2249 96 7 3 chr5 189790738 189791039 -9839111 - AluSg SINE Alu -8 302 1 1984 156 3 10 chr5 189791118 189791425 -9838725 - AluJb SINE Alu -7 305 1 243 278 23 135 chr5 189792175 189792255 -9837895 - L2 LINE L2 -39 3233 3172 2421 81 0 0 chr5 189792255 189792553 -9837597 - AluY SINE Alu -13 298 1 243 278 23 135 chr5 189792553 189792605 -9837545 - L2 LINE L2 -100 3172 3116 1301 258 35 66 chr5 189792906 189793138 -9837012 - L1MEd LINE L1 -5314 805 567 2430 55 7 0 chr5 189793138 189793431 -9836719 - AluY SINE Alu -16 295 1 1301 258 35 66 chr5 189793431 189793776 -9836374 - L1MEd LINE L1 -5552 567 246 253 263 79 0 chr5 189793779 189793855 -9836295 + MER5C DNA MER1_type 43 124 -200 676 295 30 8 chr5 189793927 189794164 -9835986 - L1MEd LINE L1 -5874 245 4 2091 128 3 0 chr5 189794429 189794726 -9835424 - AluSx SINE Alu -14 298 1 180 0 0 0 chr5 189795020 189795040 -9835110 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 30 21 0 21 chr5 189795303 189795323 -9834827 + AT_rich Low_complexity Low_complexity 1 20 -27 2262 83 21 0 chr5 189795323 189795613 -9834537 + AluSg SINE Alu 1 296 -14 30 21 0 21 chr5 189795613 189795640 -9834510 + AT_rich Low_complexity Low_complexity 20 47 0 902 146 62 14 chr5 189795640 189795784 -9834366 - FRAM SINE Alu -15 151 1 1487 196 14 7 chr5 189796266 189796546 -9833604 + AluJb SINE Alu 1 282 -30 2434 71 0 7 chr5 189796546 189796854 -9833296 - AluY SINE Alu -5 306 1 186 71 0 0 chr5 189796865 189796893 -9833257 + (A)n Simple_repeat Simple_repeat 1 28 0 2332 111 0 0 chr5 189797322 189797620 -9832530 - AluSq SINE Alu -15 298 1 2006 138 0 13 chr5 189797832 189798136 -9832014 - AluJb SINE Alu -12 300 1 2170 117 0 7 chr5 189798945 189799244 -9830906 - AluSx SINE Alu -15 297 1 694 332 37 7 chr5 189799472 189799767 -9830383 - L1ME LINE L1 -385 5736 5433 2434 83 3 0 chr5 189800139 189800439 -9829711 - AluSp SINE Alu -12 301 1 526 145 73 106 chr5 189800978 189801157 -9828993 - L1MC5 LINE L1 -136 7825 7653 243 279 53 58 chr5 189801601 189801791 -9828359 + L1MC5 LINE L1 7749 7937 -24 1131 185 26 73 chr5 189802019 189802247 -9827903 - MER33 DNA MER1_type -2261 324 116 2360 98 0 16 chr5 189802247 189802554 -9827596 + AluSx SINE Alu 1 302 -10 1131 185 26 73 chr5 189802554 189802665 -9827485 - MER33 DNA MER1_type -2469 116 1 2232 128 0 7 chr5 189804317 189804622 -9825528 - AluSx SINE Alu -9 303 1 836 142 8 30 chr5 189804900 189805034 -9825116 + FLAM_C SINE Alu 3 133 0 504 306 41 41 chr5 189805409 189805605 -9824545 + MIR SINE MIR 13 208 -54 297 0 0 0 chr5 189805910 189805943 -9824207 + (CA)n Simple_repeat Simple_repeat 2 34 0 262 223 0 32 chr5 189806480 189806574 -9823576 - L1MC4 LINE L1 -1339 6703 6613 2435 61 0 17 chr5 189806591 189806888 -9823262 - AluSg1 SINE Alu -17 292 1 2183 123 0 7 chr5 189807000 189807301 -9822849 - AluJo SINE Alu -13 299 1 843 309 106 10 chr5 189807365 189807782 -9822368 - L2 LINE L2 -2 3311 2855 182 283 97 0 chr5 189807836 189807949 -9822201 + L2 LINE L2 1947 2070 -1244 2754 118 25 11 chr5 189809676 189810115 -9820035 + MER4C LTR ERV1 21 465 0 326 89 0 0 chr5 189810205 189810250 -9819900 + Alu SINE Alu 1 45 -255 538 148 62 139 chr5 189810355 189810474 -9819676 - L1ME LINE L1 -698 5468 5341 2281 140 0 52 chr5 189810474 189810859 -9819291 + MLT1A1 LTR MaLR 1 365 0 538 148 62 139 chr5 189810859 189810871 -9819279 - L1ME LINE L1 -825 5341 5330 2277 112 0 0 chr5 189810871 189811165 -9818985 - AluSx SINE Alu -18 294 1 538 148 62 139 chr5 189811165 189811217 -9818933 - L1ME LINE L1 -836 5330 5299 5679 39 40 6 chr5 189811217 189811919 -9818231 - L1PA5 LINE L1 0 6154 5429 538 148 62 139 chr5 189811919 189811942 -9818208 - L1ME LINE L1 -867 5299 5276 2328 86 0 13 chr5 189812310 189812614 -9817536 - AluY SINE Alu -11 300 1 2436 86 0 13 chr5 189812779 189813094 -9817056 - AluY SINE Alu 0 311 1 808 100 62 0 chr5 189813109 189813239 -9816911 - L1MB8 LINE L1 -1 6177 6040 1630 139 139 26 chr5 189813323 189813626 -9816524 - MER1B DNA MER1_type 0 337 1 248 301 0 11 chr5 189813889 189813982 -9816168 + L1MB3 LINE L1 5434 5525 -649 879 152 0 28 chr5 189814253 189814398 -9815752 + FLAM_C SINE Alu 3 143 0 2314 91 7 13 chr5 189814534 189814841 -9815309 - AluSq SINE Alu -8 305 1 2267 117 0 10 chr5 189815251 189815580 -9814570 + AluSx SINE Alu 1 312 0 2808 175 59 7 chr5 189816253 189816812 -9813338 + L1MB3 LINE L1 5565 6152 -31 275 252 48 75 chr5 189816896 189817043 -9813107 + LTR50 LTR ERVL 529 671 -124 1780 125 53 59 chr5 189817155 189817459 -9812691 - AluSx SINE Alu -10 302 1 938 255 122 32 chr5 189818296 189818796 -9811354 + MLT1G1 LTR MaLR 9 595 0 393 162 86 51 chr5 189818865 189818982 -9811168 - L1ME4a LINE L1 0 6121 6001 700 124 9 0 chr5 189819176 189819289 -9810861 - L1PB4 LINE L1 -1 6155 6042 1159 283 168 8 chr5 189820159 189820665 -9809485 + MLT1K LTR MaLR 2 588 0 1901 158 33 10 chr5 189820941 189821245 -9808905 - AluJo SINE Alu -1 311 1 2378 99 3 6 chr5 189821389 189821702 -9808448 + AluSx SINE Alu 1 312 0 352 289 0 25 chr5 189822121 189822242 -9807908 - Charlie8 DNA MER1_type -2218 199 82 2261 80 3 11 chr5 189822247 189822533 -9807617 + AluSx SINE Alu 3 286 -26 205 73 24 24 chr5 189822583 189822624 -9807526 + (CAAA)n Simple_repeat Simple_repeat 3 43 0 249 368 0 0 chr5 189822682 189822777 -9807373 + L1MC4a LINE L1 5562 5656 -506 1260 168 92 45 chr5 189822792 189823174 -9806976 - Charlie1 DNA MER1_type -17 2744 2345 5586 72 33 0 chr5 189823179 189823958 -9806192 + L1PB1 LINE L1 5278 6082 -69 343 123 0 18 chr5 189824004 189824061 -9806089 - Charlie1 DNA MER1_type -2702 59 4 409 306 78 0 chr5 189824123 189824329 -9805821 + L1MC4a LINE L1 5705 5926 -1882 2140 144 23 28 chr5 189824336 189824468 -9805682 - L1MB3 LINE L1 -1 6182 6051 2226 94 0 42 chr5 189824468 189824776 -9805374 - AluSq SINE Alu -18 295 1 2140 144 23 28 chr5 189824776 189825039 -9805111 - L1MB3 LINE L1 -132 6051 5789 2059 126 0 40 chr5 189825878 189826179 -9803971 + AluSx SINE Alu 13 301 -11 736 253 7 0 chr5 189826418 189826564 -9803586 + AluJb SINE Alu 136 282 -30 351 0 0 0 chr5 189826569 189826608 -9803542 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 23 54 0 0 chr5 189826741 189826778 -9803372 + AT_rich Low_complexity Low_complexity 1 37 0 1999 157 3 3 chr5 189826833 189827133 -9803017 - AluSx SINE Alu -12 300 1 1797 167 7 23 chr5 189827208 189827514 -9802636 - AluJo SINE Alu -9 303 3 1107 248 31 10 chr5 189827579 189827873 -9802277 + L1MD2 LINE L1 5637 5936 -423 1249 176 62 21 chr5 189827880 189828169 -9801981 - L1MB8 LINE L1 -6 6172 5872 1141 177 27 14 chr5 189828176 189828396 -9801754 - L1PA16 LINE L1 -2 6164 5942 1120 189 81 101 chr5 189828398 189828533 -9801617 + L1MD2 LINE L1 5924 6060 -299 2261 110 0 7 chr5 189828533 189828834 -9801316 - AluSx SINE Alu -13 299 1 1120 189 81 101 chr5 189828834 189829002 -9801148 + L1MD2 LINE L1 6060 6218 -141 2120 130 23 3 chr5 189829002 189829302 -9800848 - AluSx SINE Alu -6 306 1 1120 189 81 101 chr5 189829302 189829441 -9800709 + L1MD2 LINE L1 6218 6358 -1 1185 206 159 75 chr5 189829938 189830404 -9799746 - MLT1D LTR MaLR 0 505 1 187 292 22 45 chr5 189830506 189830595 -9799555 + L2 LINE L2 3186 3272 0 1093 155 58 113 chr5 189831218 189831533 -9798617 - MLT1C LTR MaLR 0 467 123 2392 83 7 0 chr5 189831533 189831833 -9798317 - AluSx SINE Alu -10 302 1 1093 155 58 113 chr5 189831833 189831949 -9798201 - MLT1C LTR MaLR -344 123 2 284 342 150 8 chr5 189832222 189832342 -9797808 + L2 LINE L2 3176 3312 -1 234 0 0 0 chr5 189882470 189882496 -9747654 + (CA)n Simple_repeat Simple_repeat 2 27 0 2056 138 3 0 chr5 189882496 189882793 -9747357 - AluSg SINE Alu -12 298 1 2371 102 0 3 chr5 189882845 189883149 -9747001 - AluSq SINE Alu -10 303 1 633 229 0 0 chr5 189883292 189883410 -9746740 - FRAM SINE Alu -56 120 3 288 77 0 0 chr5 189883534 189883573 -9746577 + (CCCCCT)n Simple_repeat Simple_repeat 5 43 0 1825 112 3 112 chr5 189883597 189883919 -9746231 - AluSp SINE Alu -26 287 1 300 27 0 0 chr5 189885240 189885277 -9744873 + (TA)n Simple_repeat Simple_repeat 2 38 0 186 133 0 0 chr5 189885723 189885753 -9744397 + (A)n Simple_repeat Simple_repeat 1 30 0 276 247 27 14 chr5 189888039 189888112 -9742038 - L2 LINE L2 -6 3307 3234 250 246 8 49 chr5 189889406 189889528 -9740622 + L1MC/D LINE L1 4407 4523 -1623 21 0 0 0 chr5 189889566 189889587 -9740563 + AT_rich Low_complexity Low_complexity 1 21 0 501 293 48 25 chr5 189889742 189890031 -9740119 + L1MC/D LINE L1 4735 5034 -1112 1001 274 103 17 chr5 189890252 189890603 -9739547 + L1MC/D LINE L1 5254 5634 -2174 406 210 30 20 chr5 189890640 189890740 -9739410 + MIR SINE MIR 160 260 -2 416 237 33 46 chr5 189890747 189890899 -9739251 - MIR SINE MIR 0 262 113 2588 58 3 10 chr5 189891124 189891436 -9738714 - AluY SINE Alu -1 310 1 208 204 92 120 chr5 189891554 189891696 -9738454 + MIR SINE MIR 64 201 -61 2339 93 13 0 chr5 189891696 189891996 -9738154 + AluSg SINE Alu 1 304 -6 184 222 0 0 chr5 189892092 189892137 -9738013 - L2 LINE L2 -336 2977 2933 196 349 12 0 chr5 189892356 189892439 -9737711 - L2 LINE L2 -556 2758 2675 301 248 149 28 chr5 189892525 189892666 -9737484 - L1ME4a LINE L1 -22 6099 5942 2525 45 3 10 chr5 189893794 189894104 -9736046 - AluY SINE Alu -3 308 1 553 261 118 20 chr5 189894519 189894722 -9735428 - MIR SINE MIR -13 249 27 2526 54 3 0 chr5 189895526 189895824 -9734326 + AluY SINE Alu 1 299 -12 1744 119 8 0 chr5 189896250 189896493 -9733657 + AluSg/x SINE Alu 66 310 -2 288 0 0 0 chr5 189896493 189896525 -9733625 + (TA)n Simple_repeat Simple_repeat 2 33 0 673 168 0 26 chr5 189896525 189896638 -9733512 - FLAM_C SINE Alu -20 123 14 2152 129 60 20 chr5 189897577 189897927 -9732223 - THE1B LTR MaLR 0 364 1 1349 126 30 7 chr5 189897976 189898344 -9731806 - MSTB LTR MaLR 0 426 1 2114 134 7 0 chr5 189898367 189898665 -9731485 + AluSx SINE Alu 1 300 -12 304 262 77 124 chr5 189899039 189899223 -9730927 - L1MC4a LINE L1 -1746 6062 5871 2267 96 7 3 chr5 189899223 189899524 -9730626 - AluSg SINE Alu -8 302 1 304 262 77 124 chr5 189899524 189899603 -9730547 - L1MC4a LINE L1 -1937 5871 5818 2001 156 3 10 chr5 189899603 189899910 -9730240 - AluJb SINE Alu -7 305 1 304 262 77 124 chr5 189899910 189900007 -9730143 - L1MC4a LINE L1 -1990 5818 5718 231 274 83 115 chr5 189900631 189900740 -9729410 - L2 LINE L2 0 3272 3168 2445 84 0 0 chr5 189900740 189901038 -9729112 - AluY SINE Alu -13 298 1 231 274 83 115 chr5 189901038 189901085 -9729065 - L2 LINE L2 -104 3168 3121 1142 259 35 64 chr5 189901307 189901552 -9728598 - L1MEd LINE L1 -5300 819 568 2451 58 7 0 chr5 189901552 189901845 -9728305 - AluY SINE Alu -16 295 1 1142 259 35 64 chr5 189901845 189902190 -9727960 - L1MEd LINE L1 -5551 568 246 267 263 79 0 chr5 189902193 189902269 -9727881 + MER5C DNA MER1_type 43 124 -200 630 291 29 5 chr5 189902372 189902578 -9727572 - L1MEd LINE L1 -5905 214 4 2123 128 3 0 chr5 189902843 189903139 -9727011 - AluSx SINE Alu -15 297 1 180 0 0 0 chr5 189903433 189903453 -9726697 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 23 42 0 21 chr5 189903716 189903736 -9726414 + AT_rich Low_complexity Low_complexity 1 20 -27 2270 82 21 3 chr5 189903736 189904027 -9726123 + AluSg SINE Alu 1 296 -14 23 42 0 21 chr5 189904027 189904054 -9726096 + AT_rich Low_complexity Low_complexity 20 47 0 873 146 62 14 chr5 189904054 189904198 -9725952 - FRAM SINE Alu -15 151 1 1555 186 15 7 chr5 189904740 189905014 -9725136 + AluJb SINE Alu 7 282 -30 2476 71 0 7 chr5 189905014 189905322 -9724828 - AluY SINE Alu -5 306 1 186 71 0 0 chr5 189905333 189905361 -9724789 + (A)n Simple_repeat Simple_repeat 1 28 0 2372 111 0 0 chr5 189905790 189906088 -9724062 - AluSq SINE Alu -15 298 1 2057 141 0 13 chr5 189906298 189906604 -9723546 - AluJb SINE Alu -10 302 1 2142 124 0 7 chr5 189907412 189907711 -9722439 - AluSx SINE Alu -15 297 1 694 332 37 7 chr5 189907937 189908232 -9721918 - L1ME LINE L1 -385 5736 5433 2432 86 3 0 chr5 189908604 189908907 -9721243 - AluSp SINE Alu -9 304 1 548 184 113 82 chr5 189909369 189909625 -9720525 - L1MC5 LINE L1 -45 7916 7653 243 279 53 58 chr5 189910069 189910259 -9719891 + L1MC5 LINE L1 7749 7937 -24 1131 185 26 73 chr5 189910487 189910715 -9719435 - MER33 DNA MER1_type -2261 324 116 2373 94 0 16 chr5 189910715 189911022 -9719128 + AluSx SINE Alu 1 302 -10 1131 185 26 73 chr5 189911022 189911133 -9719017 - MER33 DNA MER1_type -2469 116 1 2232 128 0 7 chr5 189912694 189912999 -9717151 - AluSx SINE Alu -9 303 1 836 142 8 30 chr5 189913277 189913411 -9716739 + FLAM_C SINE Alu 3 133 0 504 306 41 41 chr5 189913786 189913982 -9716168 + MIR SINE MIR 13 208 -54 243 0 0 0 chr5 189914287 189914314 -9715836 + (CA)n Simple_repeat Simple_repeat 2 28 0 233 85 0 0 chr5 189914836 189914883 -9715267 - LTR66 LTR ERVL -170 440 394 226 196 39 0 chr5 189914896 189914947 -9715203 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 2425 61 0 17 chr5 189914956 189915252 -9714898 - AluSg1 SINE Alu -18 291 1 2208 123 0 7 chr5 189915364 189915666 -9714484 - AluJo SINE Alu -12 300 1 843 309 106 10 chr5 189915730 189916147 -9714003 - L2 LINE L2 -2 3311 2855 182 283 97 0 chr5 189916201 189916314 -9713836 + L2 LINE L2 1947 2070 -1244 2767 116 25 11 chr5 189918041 189918480 -9711670 + MER4C LTR ERV1 21 465 0 2290 110 0 0 chr5 189918570 189918860 -9711290 + AluSx SINE Alu 1 290 -22 546 131 73 136 chr5 189918860 189918976 -9711174 - L1ME LINE L1 -698 5468 5346 2295 138 0 52 chr5 189918976 189919361 -9710789 + MLT1A1 LTR MaLR 1 365 0 546 131 73 136 chr5 189919361 189919373 -9710777 - L1ME LINE L1 -820 5346 5335 2277 112 0 0 chr5 189919373 189919667 -9710483 - AluSx SINE Alu -18 294 1 546 131 73 136 chr5 189919667 189919719 -9710431 - L1ME LINE L1 -831 5335 5299 5652 35 49 6 chr5 189919719 189920415 -9709735 - L1PA5 LINE L1 0 6154 5429 546 131 73 136 chr5 189920415 189920438 -9709712 - L1ME LINE L1 -867 5299 5276 2243 82 0 20 chr5 189920806 189921100 -9709050 - AluY SINE Alu -10 301 14 1067 106 0 0 chr5 189921200 189921332 -9708818 + AluSp/q SINE Alu 156 287 -26 2122 160 97 13 chr5 189921383 189921553 -9708597 + MSTB LTR MaLR 1 155 -271 2396 102 0 0 chr5 189921553 189921856 -9708294 + AluSx SINE Alu 1 303 -9 2122 160 97 13 chr5 189921856 189922078 -9708072 + MSTB LTR MaLR 155 426 0 308 269 126 63 chr5 189922091 189922266 -9707884 - L1ME LINE L1 -286 5835 5650 2269 110 3 10 chr5 189922415 189922724 -9707426 + AluSx SINE Alu 1 307 -5 2436 86 0 13 chr5 189922761 189923117 -9707033 - AluY SINE Alu 0 352 1 808 100 62 0 chr5 189923132 189923262 -9706888 - L1MB8 LINE L1 -1 6177 6040 1630 139 139 26 chr5 189923346 189923649 -9706501 - MER1B DNA MER1_type 0 337 1 248 301 0 11 chr5 189923912 189924005 -9706145 + L1MB3 LINE L1 5434 5525 -649 879 152 0 28 chr5 189924276 189924421 -9705729 + FLAM_C SINE Alu 3 143 0 2314 91 7 13 chr5 189924557 189924864 -9705286 - AluSq SINE Alu -8 305 1 2267 117 0 10 chr5 189925274 189925603 -9704547 + AluSx SINE Alu 1 312 0 2836 174 59 7 chr5 189926276 189926835 -9703315 + L1MB3 LINE L1 5565 6152 -31 295 279 78 59 chr5 189926919 189927123 -9703027 + LTR50 LTR ERVL 529 736 -59 1780 125 53 59 chr5 189927178 189927482 -9702668 - AluSx SINE Alu -10 302 1 938 255 122 32 chr5 189928319 189928819 -9701331 + MLT1G1 LTR MaLR 9 595 0 393 162 86 51 chr5 189928887 189929004 -9701146 - L1ME4a LINE L1 0 6121 6001 700 124 9 0 chr5 189929198 189929311 -9700839 - L1PB4 LINE L1 -1 6155 6042 806 284 126 12 chr5 189930181 189930687 -9699463 + MLT1K LTR MaLR 2 588 0 1901 158 33 10 chr5 189930963 189931267 -9698883 - AluJo SINE Alu -1 311 1 330 67 0 0 chr5 189931549 189931594 -9698556 + (A)n Simple_repeat Simple_repeat 1 45 0 352 289 0 25 chr5 189932009 189932130 -9698020 - Charlie8 DNA MER1_type -2218 199 82 2344 97 3 10 chr5 189932135 189932504 -9697646 + AluSx SINE Alu 3 369 0 248 368 0 0 chr5 189932562 189932657 -9697493 + L1MC4a LINE L1 5562 5656 -506 1231 168 94 45 chr5 189932672 189933053 -9697097 - Charlie1 DNA MER1_type -17 2744 2345 5617 69 33 0 chr5 189933058 189933837 -9696313 + L1PB1 LINE L1 5278 6082 -69 343 123 0 18 chr5 189933883 189933940 -9696210 - Charlie1 DNA MER1_type -2702 59 4 392 311 78 0 chr5 189934002 189934208 -9695942 + L1MC4a LINE L1 5705 5926 -1882 2124 147 23 28 chr5 189934215 189934347 -9695803 - L1MB3 LINE L1 -1 6182 6051 2214 97 0 42 chr5 189934347 189934655 -9695495 - AluSq SINE Alu -18 295 1 2124 147 23 28 chr5 189934655 189934918 -9695232 - L1MB3 LINE L1 -132 6051 5789 2047 125 0 46 chr5 189935756 189936059 -9694091 + AluSx SINE Alu 13 301 -11 736 253 7 0 chr5 189936298 189936444 -9693706 + AluJb SINE Alu 136 282 -30 279 0 0 0 chr5 189936449 189936480 -9693670 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 23 54 0 0 chr5 189936613 189936650 -9693500 + AT_rich Low_complexity Low_complexity 1 37 0 1999 157 3 3 chr5 189936705 189937005 -9693145 - AluSx SINE Alu -12 300 1 1782 167 7 23 chr5 189937080 189937386 -9692764 - AluJo SINE Alu -9 303 3 1107 248 31 10 chr5 189937451 189937745 -9692405 + L1MD2 LINE L1 5637 5936 -423 1249 176 62 21 chr5 189937752 189938041 -9692109 - L1MB8 LINE L1 -6 6172 5872 1141 177 27 14 chr5 189938048 189938268 -9691882 - L1PA16 LINE L1 -2 6164 5942 1120 189 81 101 chr5 189938270 189938405 -9691745 + L1MD2 LINE L1 5924 6060 -299 2230 113 0 7 chr5 189938405 189938705 -9691445 - AluSx SINE Alu -14 298 1 1120 189 81 101 chr5 189938705 189938873 -9691277 + L1MD2 LINE L1 6060 6218 -141 2120 130 23 3 chr5 189938873 189939173 -9690977 - AluSx SINE Alu -6 306 1 1120 189 81 101 chr5 189939173 189939312 -9690838 + L1MD2 LINE L1 6218 6358 -1 1184 206 159 75 chr5 189939809 189940275 -9689875 - MLT1D LTR MaLR 0 505 1 180 292 22 45 chr5 189940377 189940466 -9689684 + L2 LINE L2 3186 3272 0 2079 163 0 0 chr5 189941024 189941330 -9688820 + AluJb SINE Alu 7 312 0 2264 209 103 36 chr5 189941609 189942160 -9687990 + MLT1G LTR MaLR 1 588 -2 254 296 14 0 chr5 189942715 189942786 -9687364 + L2 LINE L2 3201 3272 0 1093 155 58 113 chr5 189942931 189943246 -9686904 - MLT1C LTR MaLR 0 467 123 2437 83 3 0 chr5 189943246 189943547 -9686603 - AluSx SINE Alu -10 302 1 1093 155 58 113 chr5 189943547 189943663 -9686487 - MLT1C LTR MaLR -344 123 2 284 342 150 8 chr5 189943935 189944055 -9686095 + L2 LINE L2 3176 3312 -1 192 287 187 13 chr5 189944665 189944815 -9685335 - MIR SINE MIR -81 181 6 313 250 204 0 chr5 189944984 189945072 -9685078 - MIR SINE MIR -57 151 46 226 219 0 0 chr5 189945550 189945591 -9684559 + polypurine Low_complexity Low_complexity 1 41 0 210 353 15 0 chr5 189945592 189945660 -9684490 + MIR SINE MIR 10 78 -184 2409 101 0 16 chr5 189945783 189946099 -9684051 + AluSx SINE Alu 1 311 -1 190 308 192 10 chr5 189946442 189946546 -9683604 + L2 LINE L2 3185 3307 -6 286 267 0 0 chr5 189946548 189946608 -9683542 - MIR SINE MIR -1 261 202 529 219 17 17 chr5 189946608 189946786 -9683364 + CT-rich Low_complexity Low_complexity 3 180 0 584 61 0 12 chr5 189946888 189946970 -9683180 + (TTCC)n Simple_repeat Simple_repeat 1 81 0 2133 146 3 0 chr5 189946970 189947265 -9682885 - AluSx SINE Alu -16 296 1 533 264 77 7 chr5 189947283 189947438 -9682712 - MIR SINE MIR -86 176 11 406 343 36 12 chr5 189947453 189947701 -9682449 - L2 LINE L2 -191 3081 2828 296 202 172 40 chr5 189947795 189947894 -9682256 + MLT1J LTR MaLR 105 216 -295 2285 94 3 41 chr5 189947898 189948218 -9681932 + AluSp SINE Alu 1 308 -5 244 250 23 11 chr5 189948411 189948499 -9681651 + MLT1J LTR MaLR 416 504 -7 304 262 135 0 chr5 189948620 189948746 -9681404 - Charlie8 DNA MER1_type -1961 456 314 853 179 62 0 chr5 189948748 189948893 -9681257 + FRAM SINE Alu 1 154 -12 24 0 0 0 chr5 189949529 189949553 -9680597 + AT_rich Low_complexity Low_complexity 1 24 0 225 171 0 0 chr5 189950220 189950261 -9679889 + MER4E LTR ERV1 654 694 -72 27 0 0 0 chr5 189950272 189950299 -9679851 + AT_rich Low_complexity Low_complexity 1 27 0 1519 190 27 60 chr5 189951347 189951716 -9678434 - L1MB3 LINE L1 -15 6168 5812 393 109 0 0 chr5 189951764 189951828 -9678322 + HY3 scRNA scRNA 37 100 -1 1493 150 0 13 chr5 189951839 189952072 -9678078 + AluJb SINE Alu 83 312 0 1659 178 33 12 chr5 189952077 189952408 -9677742 - L1MB3 LINE L1 -352 5831 5494 573 174 98 23 chr5 189952410 189952542 -9677608 - FLAM_A SINE Alu 0 142 1 1076 92 0 6 chr5 189952569 189952733 -9677417 + (TTCC)n Simple_repeat Simple_repeat 2 164 0 1158 180 4 31 chr5 189952753 189952983 -9677167 - L1MB3 LINE L1 -691 5489 5297 2661 59 0 0 chr5 189952983 189953287 -9676863 + AluY SINE Alu 1 304 -7 1158 180 4 31 chr5 189953287 189953462 -9676688 - L1MB3 LINE L1 -883 5297 5119 249 231 0 0 chr5 189954335 189954387 -9675763 - L2 LINE L2 0 3313 3262 388 338 117 0 chr5 189954416 189954638 -9675512 + MIR SINE MIR 15 262 0 198 300 53 93 chr5 189954643 189954785 -9675365 - L2 LINE L2 -93 3220 3091 1798 158 20 17 chr5 189954785 189955082 -9675068 + AluJb SINE Alu 11 308 -4 198 300 53 93 chr5 189955082 189955186 -9674964 - L2 LINE L2 -222 3091 2984 2378 99 3 0 chr5 189955392 189955694 -9674456 + AluY SINE Alu 1 303 -8 344 172 17 0 chr5 189955714 189955772 -9674378 + MER70A LTR ERVL 401 459 -13 227 286 65 78 chr5 189956046 189956291 -9673859 - MLT1H LTR MaLR -203 346 105 810 275 57 57 chr5 189956350 189956753 -9673397 + L2 LINE L2 2826 3228 -85 1790 157 0 53 chr5 189956892 189957211 -9672939 + AluJb SINE Alu 1 302 -10 208 319 164 0 chr5 189957262 189957378 -9672772 - L2 LINE L2 0 3272 3138 187 273 34 91 chr5 189957487 189957575 -9672575 - L2 LINE L2 0 3272 3190 2406 103 3 0 chr5 189957799 189958109 -9672041 + AluSq SINE Alu 1 311 -2 30 0 0 0 chr5 189958111 189958141 -9672009 + AT_rich Low_complexity Low_complexity 1 30 0 262 283 132 7 chr5 189959212 189959364 -9670786 - L2 LINE L2 -223 3090 2920 528 317 104 19 chr5 189959441 189959700 -9670450 - L2 LINE L2 -533 2781 2501 350 306 82 0 chr5 189959753 189959887 -9670263 + MIR SINE MIR 5 149 -113 2879 173 19 5 chr5 189959889 189960473 -9669677 + L1MB4 LINE L1 5588 6179 -1 2329 96 0 0 chr5 189960482 189960773 -9669377 + AluSx SINE Alu 1 291 -21 4173 134 150 17 chr5 189961006 189962354 -9667796 + pTR5 LTR ERV1 741 2438 0 323 85 0 0 chr5 189962833 189962880 -9667270 - MADE1 DNA Mariner 0 80 34 358 330 39 50 chr5 189962881 189963063 -9667087 + L1ME4a LINE L1 5678 5857 -264 763 208 148 0 chr5 189963070 189963253 -9666897 - MIR SINE MIR -19 243 34 482 191 0 0 chr5 189963305 189963389 -9666761 + AluJo SINE Alu 124 207 -105 1251 122 24 0 chr5 189963399 189963604 -9666546 - L1MC1 LINE L1 -341 5992 5783 411 111 0 0 chr5 189963607 189963670 -9666480 + FLAM_A SINE Alu 72 134 -8 797 188 11 6 chr5 189963815 189963996 -9666154 - L1MC1 LINE L1 0 6333 6152 370 43 0 0 chr5 189963997 189964043 -9666107 - 5S rRNA rRNA -75 46 1 2459 129 4 84 chr5 189964043 189964117 -9666033 - L1MC1 LINE L1 -165 6168 6090 2368 102 0 0 chr5 189964117 189964411 -9665739 - AluSx SINE Alu -15 297 4 2459 129 4 84 chr5 189964411 189964567 -9665583 - L1MC1 LINE L1 -243 6090 5923 2410 58 0 7 chr5 189964567 189964859 -9665291 - AluY SINE Alu -21 290 1 2459 129 4 84 chr5 189964859 189965115 -9665035 - L1MC1 LINE L1 -410 5923 5720 2145 114 40 3 chr5 189965339 189965637 -9664513 - AluJb SINE Alu -3 309 1 562 134 6 128 chr5 189965825 189965928 -9664222 + Charlie1 DNA MER1_type 2611 2725 -36 2319 113 0 0 chr5 189965928 189966228 -9663922 - AluSx SINE Alu -12 300 1 1875 160 10 0 chr5 189966236 189966530 -9663620 - AluSx SINE Alu -15 297 1 562 134 6 128 chr5 189966530 189966589 -9663561 + Charlie1 DNA MER1_type 2732 2761 0 1663 148 26 0 chr5 189966855 189967119 -9663031 + AluJo SINE Alu 15 285 -27 324 211 0 0 chr5 189967125 189967196 -9662954 + (TATG)n Simple_repeat Simple_repeat 2 72 0 2318 107 0 0 chr5 189967279 189967570 -9662580 + AluSp SINE Alu 1 291 -22 287 206 55 3 chr5 189967599 189967692 -9662458 + L1ME3 LINE L1 6073 6160 -2 1099 289 77 39 chr5 189967809 189968550 -9661600 - L1ME3A LINE L1 -208 5962 5316 765 297 16 16 chr5 189968652 189968958 -9661192 - L2 LINE L2 -153 3160 2855 544 255 61 133 chr5 189968961 189969379 -9660771 - L1ME3A LINE L1 -863 5283 4927 1937 126 43 0 chr5 189969379 189969499 -9660651 + AluJb SINE Alu 1 114 -198 233 56 0 28 chr5 189969499 189969535 -9660615 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1937 126 43 0 chr5 189969535 189969691 -9660459 + AluJb SINE Alu 114 289 -23 544 255 61 133 chr5 189969691 189969924 -9660226 - L1ME3A LINE L1 -1219 4927 4679 1522 173 0 4 chr5 189969924 189970161 -9659989 + AluJb SINE Alu 1 236 -76 930 135 0 14 chr5 189970263 189970411 -9659739 + AluJb SINE Alu 167 312 0 262 230 37 52 chr5 189970412 189970547 -9659603 - L1ME3A LINE L1 -1457 4689 4557 622 189 0 0 chr5 189970770 189970876 -9659274 + FLAM_A SINE Alu 18 123 -19 1908 136 3 42 chr5 189971928 189972236 -9657914 - AluJo SINE Alu -16 296 1 2359 69 0 39 chr5 189972246 189972551 -9657599 - AluY SINE Alu -18 293 1 191 211 0 0 chr5 189972558 189972596 -9657554 + MIR SINE MIR 106 143 -119 296 252 43 58 chr5 189973241 189973442 -9656708 + MIR SINE MIR 16 254 -8 184 256 0 0 chr5 189973678 189973721 -9656429 + MIR SINE MIR 219 261 -1 596 253 84 25 chr5 189973807 189974009 -9656141 + MIR SINE MIR 28 241 -21 184 264 92 35 chr5 189973986 189974073 -9656077 - L2 LINE L2 -39 3233 3142 * 300 111 0 0 chr5 189976548 189976593 -9653557 + (CCA)n Simple_repeat Simple_repeat 2 46 0 296 330 11 0 chr5 189976634 189976722 -9653428 + MIR SINE MIR 102 190 -72 215 283 17 0 chr5 189977023 189977083 -9653067 + L2 LINE L2 3229 3289 -24 285 324 150 19 chr5 189977097 189977318 -9652832 + MIR3 SINE MIR 15 262 0 21 0 0 0 chr5 189978233 189978254 -9651896 + GC_rich Low_complexity Low_complexity 1 21 0 233 222 32 16 chr5 189978750 189978813 -9651337 - L2 LINE L2 -73 3199 3136 240 111 0 0 chr5 189978836 189978881 -9651269 + (A)n Simple_repeat Simple_repeat 1 45 0 369 0 0 0 chr5 189980681 189980722 -9649428 + (A)n Simple_repeat Simple_repeat 1 41 0 253 167 74 0 chr5 189981185 189981239 -9648911 + MER91B DNA MER1_type 5 62 -128 285 226 0 0 chr5 189984011 189984073 -9646077 + C-rich Low_complexity Low_complexity 4 65 0 299 213 21 102 chr5 189984295 189984441 -9645709 - MIR SINE MIR -58 150 20 248 214 43 29 chr5 189984643 189984713 -9645437 + CT-rich Low_complexity Low_complexity 5 75 0 2490 152 24 11 chr5 189984719 189985179 -9644971 - L1MB7 LINE L1 -8 6176 5711 680 207 127 0 chr5 189985264 189985414 -9644736 + MER45A DNA AcHobo 10 178 0 264 59 0 0 chr5 189985643 189985677 -9644473 + (TG)n Simple_repeat Simple_repeat 1 34 0 181 256 0 0 chr5 189985787 189985826 -9644324 - MIR SINE MIR -7 255 217 452 339 96 51 chr5 189986181 189986609 -9643541 + L1MC4a LINE L1 4886 5332 -814 347 294 166 23 chr5 189986640 189987069 -9643081 + L1MC4a LINE L1 5406 5895 -1913 192 277 21 64 chr5 189987247 189987341 -9642809 - MER5A DNA MER1_type -27 162 73 518 219 98 24 chr5 189988631 189988795 -9641355 - L1ME1 LINE L1 -5 6161 5986 2432 63 0 0 chr5 189990210 189990519 -9639631 - AluSq SINE Alu 0 309 1 21 0 0 0 chr5 189991727 189991748 -9638402 + AT_rich Low_complexity Low_complexity 1 21 0 2488 243 65 17 chr5 189993011 189993877 -9636273 - L1ME3A LINE L1 -76 6094 5180 1775 168 7 10 chr5 189994492 189994789 -9635361 - AluJb SINE Alu -8 304 9 879 184 0 7 chr5 189994789 189994936 -9635214 - AluJo SINE Alu -166 146 1 345 260 20 10 chr5 189995640 189995740 -9634410 + MIR SINE MIR 98 198 -64 2356 221 29 42 chr5 189995740 189996129 -9634021 + MLT1G LTR MaLR 10 403 -187 183 42 0 0 chr5 189996129 189996153 -9633997 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2356 221 29 42 chr5 189996153 189996171 -9633979 + MLT1G LTR MaLR 403 420 -170 1843 108 48 4 chr5 189996171 189996421 -9633729 - AluSx SINE Alu -47 265 5 2356 221 29 42 chr5 189996421 189996600 -9633550 + MLT1G LTR MaLR 420 589 -1 391 154 32 8 chr5 189997275 189997398 -9632752 + GA-rich Low_complexity Low_complexity 1 126 0 1263 191 32 0 chr5 189997799 189998082 -9632068 + L1MA7 LINE L1 5998 6289 -2 974 203 207 4 chr5 189998086 189998332 -9631818 + AluSx SINE Alu 1 296 -16 777 51 0 0 chr5 189998363 189998461 -9631689 - HY3 scRNA scRNA 0 101 4 284 257 145 0 chr5 189998603 189998703 -9631447 - MER5A DNA MER1_type -12 166 64 23 33 0 0 chr5 189998703 189998733 -9631417 + AT_rich Low_complexity Low_complexity 1 30 0 844 164 0 0 chr5 189998733 189998861 -9631289 - FLAM_C SINE Alu -15 128 1 589 185 231 21 chr5 189999429 189999644 -9630506 + MER33 DNA MER1_type 31 304 -2281 1813 166 9 35 chr5 189999644 189999963 -9630187 - AluJo SINE Alu -1 311 1 589 185 231 21 chr5 189999963 189999990 -9630160 + MER33 DNA MER1_type 304 324 0 487 308 23 9 chr5 190000058 190000272 -9629878 - L1MC4a LINE L1 -1886 5922 5706 320 295 23 31 chr5 190000384 190000513 -9629637 + MER94 DNA DNA 3 130 -4 204 405 59 7 chr5 190001767 190001920 -9628230 - L3 LINE CR1 -49 1528 1368 1766 177 0 10 chr5 190001929 190002229 -9627921 - AluJo SINE Alu -15 297 1 22 70 0 0 chr5 190003004 190003047 -9627103 + AT_rich Low_complexity Low_complexity 1 43 0 1136 224 131 19 chr5 190003232 190003607 -9626543 - MER47B DNA MER2_type 0 418 2 21 0 0 0 chr5 190003661 190003682 -9626468 + AT_rich Low_complexity Low_complexity 1 21 0 805 154 0 0 chr5 190003735 190003858 -9626292 - FLAM_C SINE Alu -20 123 1 433 211 33 11 chr5 190004006 190004096 -9626054 - MER5A DNA MER1_type -2 187 96 1157 121 0 0 chr5 190004112 190004286 -9625864 - AluSq SINE Alu 0 313 140 1038 184 0 11 chr5 190004416 190004606 -9625544 - AluJo SINE Alu -124 188 1 307 156 0 0 chr5 190004606 190004651 -9625499 + MLT1H LTR MaLR 125 169 -380 1567 108 3 119 chr5 190004654 190004949 -9625201 + AluJb SINE Alu 1 261 -51 265 111 0 0 chr5 190004953 190004989 -9625161 + MLT1H LTR MaLR 134 169 -380 1865 116 3 102 chr5 190004992 190005358 -9624792 + AluJb SINE Alu 1 332 0 582 257 39 43 chr5 190005362 190005607 -9624543 + MLT1H LTR MaLR 105 362 -180 724 108 83 0 chr5 190005611 190005731 -9624419 - MER20 DNA MER1_type -3 216 87 358 177 189 7 chr5 190005798 190005906 -9624244 + MLT1H LTR MaLR 399 550 -5 674 282 6 6 chr5 190006146 190006316 -9623834 + MIR SINE MIR 23 192 -70 1068 240 5 5 chr5 190006326 190006543 -9623607 - MER58A DNA MER1_type -4 220 4 911 142 65 0 chr5 190006668 190006823 -9623327 - AluJb SINE Alu -17 295 131 472 193 18 152 chr5 190006908 190007079 -9623071 + MLT1F LTR MaLR 1 148 -394 520 158 73 0 chr5 190007080 190007162 -9622988 - AluJ/FLAM SINE Alu -223 89 2 26 50 0 0 chr5 190007749 190007789 -9622361 + AT_rich Low_complexity Low_complexity 1 40 0 894 213 0 0 chr5 190007987 190008161 -9621989 - FAM SINE Alu -1 174 1 310 289 43 64 chr5 190008437 190008498 -9621652 + MIR SINE MIR 39 100 -162 2290 86 0 3 chr5 190008498 190008802 -9621348 + AluSx SINE Alu 1 303 -9 310 289 43 64 chr5 190008802 190008927 -9621223 + MIR SINE MIR 100 221 -41 601 292 78 32 chr5 190009998 190010217 -9619933 + MIR SINE MIR 28 256 -6 702 210 0 0 chr5 190010518 190010637 -9619513 - FRAM SINE Alu -56 120 2 250 254 30 52 chr5 190010825 190010882 -9619268 - L1ME4a LINE L1 -175 5946 5889 1657 155 10 20 chr5 190010882 190011179 -9618971 - AluJo SINE Alu -18 294 1 250 254 30 52 chr5 190011179 190011255 -9618895 - L1ME4a LINE L1 -232 5889 5816 523 158 11 0 chr5 190011400 190011495 -9618655 - FLAM_C SINE Alu -9 134 39 288 0 0 0 chr5 190013395 190013427 -9616723 + (T)n Simple_repeat Simple_repeat 1 32 0 1792 122 3 39 chr5 190013920 190014236 -9615914 - AluJo SINE Alu 0 314 9 25 65 0 0 chr5 190014424 190014470 -9615680 + AT_rich Low_complexity Low_complexity 1 46 0 2164 102 0 0 chr5 190014667 190014970 -9615180 + AluSx SINE Alu 1 303 -9 1609 152 0 28 chr5 190015807 190016090 -9614060 - AluJb SINE Alu -24 288 14 296 252 106 63 chr5 190016132 190016386 -9613764 - L1ME4a LINE L1 -225 5896 5632 493 251 58 40 chr5 190016867 190017167 -9612983 - MLT1J LTR MaLR -128 383 2 314 263 195 0 chr5 190017605 190017723 -9612427 - MIR SINE MIR -98 164 24 1553 141 38 8 chr5 190017761 190018023 -9612127 + AluJb SINE Alu 1 270 -42 2090 245 135 58 chr5 190018065 190018894 -9611256 - HAL1 LINE L1 -98 2409 1458 1608 174 3 25 chr5 190018894 190019210 -9610940 - AluJo SINE Alu -1 311 3 2090 245 135 58 chr5 190019210 190019582 -9610568 - HAL1 LINE L1 -1049 1458 1116 202 309 25 0 chr5 190119587 190119668 -9510482 + CT-rich Low_complexity Low_complexity 2 84 0 306 287 124 45 chr5 190119669 190120044 -9510106 - L1MCa LINE L1 -4928 1498 1167 325 242 25 33 chr5 190120171 190120291 -9509859 + CT-rich Low_complexity Low_complexity 3 121 0 300 137 0 0 chr5 190120295 190120346 -9509804 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 225 308 0 0 chr5 190120381 190120433 -9509717 + L2 LINE L2 3245 3296 -17 2925 152 31 6 chr5 190120662 190121182 -9508968 - L1MB3 LINE L1 -10 6173 5641 250 320 32 16 chr5 190121380 190121505 -9508645 + MIR SINE MIR 20 146 -116 227 301 60 38 chr5 190121888 190122021 -9508129 - L2 LINE L2 0 3272 3137 712 266 77 21 chr5 190122027 190122260 -9507890 - MIR SINE MIR 0 262 17 271 303 22 0 chr5 190122626 190122715 -9507435 - MIR SINE MIR -70 192 102 572 269 145 9 chr5 190122967 190123194 -9506956 + L2 LINE L2 3055 3312 -1 207 100 0 0 chr5 190123697 190123727 -9506423 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 532 279 14 7 chr5 190123729 190123869 -9506281 - L2 LINE L2 -6 3307 3167 200 35 35 0 chr5 190125033 190125062 -9505088 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 2168 117 0 0 chr5 190125065 190125373 -9504777 - AluSq SINE Alu -5 308 1 454 316 48 6 chr5 190125634 190125802 -9504348 - MIR SINE MIR -43 219 45 206 304 27 0 chr5 190125812 190125924 -9504226 + (TA)n Simple_repeat Simple_repeat 2 116 0 375 213 18 104 chr5 190125981 190126145 -9504005 + L1MCa LINE L1 1915 2064 -4362 * 384 245 89 12 chr5 190126106 190126236 -9503914 - L1MC4 LINE L1 -1340 6982 1995 377 307 51 15 chr5 190126160 190126237 -9503913 + L1MC4 LINE L1 6614 6700 -1342 * 1815 80 0 4 chr5 190126237 190126474 -9503676 - AluSc SINE Alu -21 288 53 377 307 51 15 chr5 190126474 190126533 -9503617 + L1MC4 LINE L1 6700 6755 -1287 188 204 45 114 chr5 190127110 190127198 -9502952 - L2 LINE L2 -7 3265 3184 202 309 82 27 chr5 190127335 190127445 -9502705 + L3 LINE CR1 1462 1577 0 505 274 51 77 chr5 190128117 190128351 -9501799 - MIR SINE MIR 0 262 35 290 309 21 11 chr5 190129351 190129445 -9500705 + MIR SINE MIR 162 256 -6 386 319 50 0 chr5 190129732 190129873 -9500277 + MIR SINE MIR 107 254 -8 310 232 24 37 chr5 190129891 190129973 -9500177 + L1ME4a LINE L1 6037 6117 -4 1993 140 7 0 chr5 190132934 190133241 -9496909 + AluSx SINE Alu 3 311 -1 423 324 115 55 chr5 190133416 190133885 -9496265 - MLT1L LTR MaLR 0 615 119 2777 3 3 0 chr5 190134209 190134519 -9495631 - AluYa5 SINE Alu 0 311 1 532 288 0 14 chr5 190134531 190134670 -9495480 + MIR SINE MIR 47 183 -79 900 223 268 18 chr5 190136554 190136890 -9493260 + MLT1K LTR MaLR 1 420 -168 1173 164 14 5 chr5 190136891 190137105 -9493045 + AluJb SINE Alu 82 297 -15 547 213 29 75 chr5 190137105 190137279 -9492871 + MLT1K LTR MaLR 415 580 -8 4506 141 10 25 chr5 190138101 190138675 -9491475 - L1MB3 LINE L1 0 6183 5621 2311 100 0 0 chr5 190138675 190138984 -9491166 - AluSg SINE Alu -1 309 1 4506 141 10 25 chr5 190138984 190139181 -9490969 - L1MB3 LINE L1 -562 5621 5423 192 258 76 15 chr5 190139370 190139436 -9490714 - MIR3 SINE MIR -31 177 108 410 354 116 14 chr5 190139441 190139656 -9490494 + MIR SINE MIR 13 249 -13 197 369 12 24 chr5 190140119 190140203 -9489947 - L2 LINE L2 0 3313 3231 324 336 10 9 chr5 190140507 190140729 -9489421 + L1MC4a LINE L1 5731 5839 -331 2077 156 0 78 chr5 190140773 190141196 -9488954 - MLT1B LTR MaLR 0 390 1 879 271 116 20 chr5 190141741 190142164 -9487986 - MLT1F1 LTR MaLR -44 505 60 245 190 17 69 chr5 190142141 190142199 -9487951 - MLT1H1 LTR MaLR -351 191 137 * 2417 226 20 43 chr5 190142208 190142762 -9487388 - MLT1F1 LTR MaLR 0 567 27 493 224 70 20 chr5 190142771 190142903 -9487247 - MLT1H1 LTR MaLR -369 180 17 1366 214 69 44 chr5 190142903 190143267 -9486883 - MLT1A2 LTR MaLR 0 374 2 705 164 79 0 chr5 190143268 190143408 -9486742 - MLT1A2-int LTR MaLR 0 1735 1585 366 327 153 0 chr5 190143420 190143643 -9486507 - LTR16C LTR ERVL -68 423 167 542 285 0 54 chr5 190143928 190144114 -9486036 - L2 LINE L2 0 3313 3138 635 277 48 24 chr5 190144410 190144616 -9485534 + MLT1L LTR MaLR 405 615 0 327 272 177 20 chr5 190144617 190144764 -9485386 - MIR SINE MIR -60 202 33 385 323 146 9 chr5 190145122 190145342 -9484808 + L1ME4a LINE L1 5848 6097 -24 912 281 13 17 chr5 190145413 190145644 -9484506 + MIR SINE MIR 1 230 -32 259 237 178 17 chr5 190145709 190145827 -9484323 + L3 LINE CR1 1259 1395 -182 234 197 26 105 chr5 190146345 190146421 -9483729 - MIR3 SINE MIR -14 194 125 813 232 17 6 chr5 190146760 190146941 -9483209 - MER58A DNA MER1_type -18 206 24 554 336 36 28 chr5 190146989 190147239 -9482911 + MIR SINE MIR 6 257 -5 203 156 0 0 chr5 190147242 190147274 -9482876 + (CAT)n Simple_repeat Simple_repeat 3 34 0 190 360 7 50 chr5 190147468 190147607 -9482543 - MIR3 SINE MIR -71 137 5 913 316 105 14 chr5 190148085 190148579 -9481571 + L2 LINE L2 35 573 -2741 813 229 11 11 chr5 190148610 190148785 -9481365 - MIR SINE MIR -4 258 84 3333 142 50 3 chr5 190148805 190149383 -9480767 + L1MA8 LINE L1 5668 6272 -19 25 31 0 0 chr5 190149387 190149419 -9480731 + AT_rich Low_complexity Low_complexity 1 32 0 203 277 21 0 chr5 190149419 190149466 -9480684 - MIR SINE MIR -202 60 13 667 262 87 13 chr5 190149488 190149717 -9480433 + L2 LINE L2 586 831 -2483 1242 201 12 87 chr5 190149717 190150051 -9480099 + MLT1A2 LTR MaLR 1 309 -65 1983 259 194 8 chr5 190150067 190150913 -9479237 + L2 LINE L2 1002 2004 -1310 1517 255 122 17 chr5 190151273 190151865 -9478285 + L2 LINE L2 2003 2656 -658 1177 238 174 28 chr5 190151869 190152294 -9477856 - MLT1D LTR MaLR 0 505 19 731 302 93 26 chr5 190152313 190152919 -9477231 + L2 LINE L2 2656 3308 -5 296 261 188 29 chr5 190153305 190153443 -9476707 - MLT1K LTR MaLR -17 571 412 394 323 57 0 chr5 190154790 190154914 -9475236 + MIR SINE MIR 30 160 -102 373 186 23 68 chr5 190154928 190155105 -9475045 + (TATAA)n Simple_repeat Simple_repeat 4 172 0 328 203 0 0 chr5 190155252 190155311 -9474839 + MLT1I LTR MaLR 82 140 -269 447 305 209 41 chr5 190155803 190156479 -9473671 - L2 LINE L2 -16 3297 2510 3037 127 21 118 chr5 190156786 190157076 -9473074 + L1MA9 LINE L1 5512 5829 -483 258 105 0 0 chr5 190157076 190157114 -9473036 + (TG)n Simple_repeat Simple_repeat 2 39 0 3037 127 21 118 chr5 190157114 190157129 -9473021 + L1MA9 LINE L1 5829 5844 -468 1967 85 0 35 chr5 190157129 190157411 -9472739 + AluSc SINE Alu 1 272 -37 3037 127 21 118 chr5 190157411 190157423 -9472727 + L1MA9 LINE L1 5844 5856 -456 468 48 0 0 chr5 190157423 190157486 -9472664 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 2937 123 9 9 chr5 190157486 190157909 -9472241 + MSTB LTR MaLR 4 426 0 3037 127 21 118 chr5 190157909 190158268 -9471882 + L1MA9 LINE L1 5854 6125 -187 214 297 176 0 chr5 190158900 190158991 -9471159 + L2 LINE L2 3139 3245 -27 181 301 68 39 chr5 190159435 190159538 -9470612 + L2 LINE L2 2957 3062 -251 633 289 50 5 chr5 190159597 190159798 -9470352 + MIR SINE MIR 14 223 -39 1744 150 3 20 chr5 190160705 190161011 -9469139 + AluJo SINE Alu 1 301 -11 2032 119 3 0 chr5 190162142 190162435 -9467715 + AluSx SINE Alu 1 294 -18 525 307 103 33 chr5 190162498 190162827 -9467323 + MLT1K LTR MaLR 227 578 -10 354 158 13 26 chr5 190162974 190163050 -9467100 + L1MB4 LINE L1 5447 5521 -645 234 254 17 0 chr5 190163311 190163370 -9466780 + MIR SINE MIR 92 151 -111 600 50 0 0 chr5 190164231 190164311 -9465839 + (TG)n Simple_repeat Simple_repeat 2 81 0 561 261 11 60 chr5 190164417 190164559 -9465591 + L1ME3 LINE L1 5988 6121 -41 2836 167 25 24 chr5 190164559 190165111 -9465039 + L1MB4 LINE L1 5621 6173 -7 561 261 11 60 chr5 190165111 190165152 -9464998 + L1ME3 LINE L1 6121 6162 0 829 150 0 23 chr5 190165169 190165286 -9464864 + FLAM_A SINE Alu 10 125 -186 1561 174 18 4 chr5 190165286 190165567 -9464583 - AluJb SINE Alu -26 286 2 829 150 0 23 chr5 190165567 190165582 -9464568 + FLAM_A SINE Alu 125 139 -172 34 24 0 0 chr5 190165584 190165625 -9464525 + AT_rich Low_complexity Low_complexity 1 41 0 180 267 22 0 chr5 190165735 190165780 -9464370 - MIR SINE MIR -189 73 28 254 284 47 71 chr5 190166315 190166442 -9463708 - MIR3 SINE MIR -4 204 81 506 245 41 20 chr5 190166442 190166589 -9463561 + MIR SINE MIR 47 196 -66 223 300 13 36 chr5 190166662 190166759 -9463391 - MIR SINE MIR -75 133 65 430 235 74 62 chr5 190167169 190167331 -9462819 - MIR SINE MIR -10 252 89 242 333 46 9 chr5 190167402 190167510 -9462640 + L2 LINE L2 2925 3036 -236 1330 130 5 0 chr5 190167682 190167889 -9462261 + AluJb SINE Alu 94 301 -11 447 165 55 0 chr5 190167947 190168038 -9462112 + L1MA9 LINE L1 5740 5835 -477 570 194 0 0 chr5 190168038 190168136 -9462014 - MLT1B LTR MaLR -292 98 1 2075 138 36 48 chr5 190169194 190169586 -9460564 + MLT1B LTR MaLR 1 387 -3 370 316 53 0 chr5 190170056 190170170 -9459980 - MIR SINE MIR -126 136 17 2506 197 15 15 chr5 190170543 190171015 -9459135 + MER70A LTR ERVL 1 472 0 183 275 101 14 chr5 190171155 190171224 -9458926 - MIR SINE MIR -88 120 46 255 283 142 40 chr5 190171263 190171489 -9458661 + L1MC4a LINE L1 5886 6134 -1674 2234 76 3 0 chr5 190171514 190171802 -9458348 + AluSp SINE Alu 1 289 -24 329 260 0 67 chr5 190171802 190171900 -9458250 + L1MC4 LINE L1 6613 6703 -1339 321 211 167 44 chr5 190171835 190171949 -9458201 - L1MCa LINE L1 -4365 2061 1934 * 367 252 102 14 chr5 190171950 190172097 -9458053 + L1ME4a LINE L1 5961 6120 -1 1727 193 50 19 chr5 190172694 190173072 -9457078 + MLT1B LTR MaLR 1 390 0 788 168 8 8 chr5 190173590 190173721 -9456429 + FLAM_C SINE Alu 3 133 0 1280 250 78 12 chr5 190175038 190175382 -9454768 - MLT1J LTR MaLR -45 466 100 338 219 62 42 chr5 190176463 190176559 -9453591 - MER103 DNA DNA -51 115 18 890 243 16 5 chr5 190176671 190176860 -9453290 + MIR SINE MIR 29 219 -43 317 167 13 0 chr5 190176873 190176951 -9453199 + (ATG)n Simple_repeat Simple_repeat 3 81 0 273 287 149 0 chr5 190177004 190177091 -9453059 + L2 LINE L2 3171 3270 -2 202 224 15 45 chr5 190177470 190177537 -9452613 + GA-rich Low_complexity Low_complexity 2 66 0 2644 112 0 3 chr5 190177922 190178287 -9451863 - THE1B LTR MaLR 0 364 1 440 274 141 38 chr5 190178652 190178999 -9451151 + L2 LINE L2 2886 3268 -45 309 254 110 34 chr5 190179317 190179435 -9450715 + L1MC3 LINE L1 6937 7063 -722 23 68 0 0 chr5 190179461 190179505 -9450645 + AT_rich Low_complexity Low_complexity 1 44 0 375 121 0 0 chr5 190179787 190179845 -9450305 + (CA)n Simple_repeat Simple_repeat 1 58 0 315 100 283 0 chr5 190179858 190179918 -9450232 + MLT1K LTR MaLR 154 230 -358 2644 134 37 23 chr5 190179965 190180147 -9450003 - Tigger2 DNA MER2_type 0 2718 2540 2191 99 0 3 chr5 190180147 190180450 -9449700 - AluSx SINE Alu -10 302 1 2644 134 37 23 chr5 190180450 190180700 -9449450 - Tigger2 DNA MER2_type -178 2540 2280 416 123 0 0 chr5 190180709 190180766 -9449384 - Tigger2 DNA MER2_type -2660 58 2 600 242 113 5 chr5 190180782 190180968 -9449182 + MLT1K LTR MaLR 336 541 -47 475 261 134 42 chr5 190181262 190181523 -9448627 + LTR16A1 LTR ERVL 149 433 -24 476 244 89 75 chr5 190182217 190182551 -9447599 + MLT1K LTR MaLR 3 394 -194 310 174 0 72 chr5 190182600 190182669 -9447481 + MLT1K LTR MaLR 521 584 -4 262 285 252 13 chr5 190182684 190182835 -9447315 + MIR3 SINE MIR 1 187 -21 312 337 16 57 chr5 190183066 190183259 -9446891 - MIR SINE MIR -22 240 56 1246 282 73 21 chr5 190185054 190185714 -9444436 + L1ME4a LINE L1 5258 5951 -170 42019 35 26 1 chr5 190185825 190190876 -9439274 + L1PA3 LINE L1 1 5177 -969 3093 3 0 0 chr5 190190976 190191314 -9438836 + L1HS LINE L1 5818 6155 0 3649 29 0 0 chr5 190191883 190192303 -9437847 + L1PA3 LINE L1 5736 6155 0 266 139 23 0 chr5 190192337 190192380 -9437770 + L2 LINE L2 3267 3310 -3 1983 119 0 23 chr5 190193432 190193734 -9436416 + AluSx SINE Alu 1 295 -17 2094 106 0 0 chr5 190195951 190196244 -9433906 + AluSc SINE Alu 1 293 -16 574 274 27 27 chr5 190198803 190199017 -9431133 + Charlie8 DNA MER1_type 33 246 -2171 654 247 89 33 chr5 190199017 190199449 -9430701 - MLT1H LTR MaLR 0 549 12 2408 109 28 11 chr5 190199544 190199584 -9430566 - THE1B LTR MaLR 0 364 326 2240 102 0 0 chr5 190199584 190199878 -9430272 + AluSx SINE Alu 1 294 -18 2408 109 28 11 chr5 190199878 190200195 -9429955 - THE1B LTR MaLR -38 326 1 24 53 0 0 chr5 190200978 190201016 -9429134 + AT_rich Low_complexity Low_complexity 1 38 0 644 261 79 59 chr5 190201036 190201507 -9428643 + L1MC5 LINE L1 7261 7740 -221 824 228 294 6 chr5 190201511 190201871 -9428279 + LTR50 LTR ERVL 3 466 -329 539 194 86 57 chr5 190201867 190202042 -9428108 + LTR50 LTR ERVL 592 771 -24 * 2088 126 0 7 chr5 190202362 190202672 -9427478 + AluSx SINE Alu 1 308 -4 428 278 133 0 chr5 190202971 190203151 -9426999 - L3b LINE CR1 -69 1514 1311 707 351 20 22 chr5 190203917 190204367 -9425783 + L1MC4 LINE L1 5373 5821 -1987 3082 246 53 52 chr5 190204375 190205452 -9424698 + L1MC4 LINE L1 6731 7812 -230 1551 199 14 7 chr5 190205452 190205749 -9424401 + AluJb SINE Alu 2 300 -12 3082 246 53 52 chr5 190205749 190205850 -9424300 + L1MC4 LINE L1 7812 7911 -131 234 193 0 0 chr5 190205873 190205930 -9424220 + (CATA)n Simple_repeat Simple_repeat 2 58 0 361 181 135 75 chr5 190205931 190206064 -9424086 + L1MC4 LINE L1 7902 8042 0 5322 68 4 1 chr5 190206378 190207059 -9423091 + L1PA13 LINE L1 5480 6162 -1 281 315 71 8 chr5 190207353 190207480 -9422670 + MIR SINE MIR 71 205 -57 751 162 0 63 chr5 190207562 190207704 -9422446 - FLAM_C SINE Alu 0 133 1 587 228 22 0 chr5 190208097 190208233 -9421917 + MER103 DNA DNA 1 139 -27 501 268 56 81 chr5 190208248 190208585 -9421565 - L2 LINE L2 -277 3036 2692 189 135 0 27 chr5 190208589 190208626 -9421524 + MIR SINE MIR 120 155 -107 2013 143 0 0 chr5 190208673 190208974 -9421176 + AluSx SINE Alu 1 301 -11 770 237 40 0 chr5 190208982 190209159 -9420991 - MER5A DNA MER1_type -5 184 1 477 302 99 40 chr5 190209162 190209516 -9420634 - L2 LINE L2 -653 2661 2287 229 273 82 82 chr5 190209524 190209634 -9420516 + L2 LINE L2 3162 3271 -1 1953 122 13 3 chr5 190210619 190210923 -9419227 + AluSq SINE Alu 1 307 -6 2097 127 0 0 chr5 190211424 190211731 -9418419 + AluSx SINE Alu 1 307 -5 505 242 23 30 chr5 190211802 190211934 -9418216 - MIR SINE MIR -108 154 24 2462 74 0 0 chr5 190212587 190212898 -9417252 + AluY SINE Alu 1 311 0 793 234 110 32 chr5 190213437 190213655 -9416495 + MIR SINE MIR 16 250 -12 809 216 36 22 chr5 190213737 190213959 -9416191 - MLT1K LTR MaLR -76 512 288 567 271 107 35 chr5 190215259 190215320 -9414830 - MLT1I LTR MaLR 0 409 354 1563 186 0 21 chr5 190215320 190215638 -9414512 - AluJo SINE Alu 0 312 1 567 271 107 35 chr5 190215638 190215912 -9414238 - MLT1I LTR MaLR -55 354 14 180 294 120 33 chr5 190216569 190216661 -9413489 - MIR SINE MIR -78 184 85 1285 194 5 0 chr5 190216667 190216884 -9413266 - MLT1A1 LTR MaLR 0 365 148 1739 177 0 7 chr5 190216884 190217207 -9412943 - AluJb SINE Alu 0 321 1 504 295 143 23 chr5 190217936 190218153 -9411997 + MIR SINE MIR 2 244 -18 263 345 92 18 chr5 190218156 190218297 -9411853 - MIR SINE MIR -65 143 1 1885 139 10 0 chr5 190219242 190219536 -9410614 - AluJo SINE Alu -15 297 1 563 269 67 16 chr5 190219536 190219729 -9410421 - MIR SINE MIR -8 254 52 2415 157 31 63 chr5 190220373 190220439 -9409711 - MLT1D LTR MaLR -1 504 437 2123 110 10 0 chr5 190220439 190220739 -9409411 + AluSx SINE Alu 1 303 -9 2415 157 31 63 chr5 190220739 190221193 -9408957 - MLT1D LTR MaLR -68 437 1 396 242 90 22 chr5 190221737 190221960 -9408190 + MER113 DNA MER1_type? 5 242 -279 216 196 20 39 chr5 190221998 190222049 -9408101 - MER5A DNA MER1_type -6 183 134 561 293 78 4 chr5 190222272 190222612 -9407538 + MLT1I LTR MaLR 9 400 -9 1566 284 5 19 chr5 190223170 190223593 -9406557 - MLT1K LTR MaLR -132 456 40 1832 187 87 42 chr5 190223953 190224434 -9405716 + MLT1D LTR MaLR 1 503 -2 548 264 156 6 chr5 190224511 190224678 -9405472 - MLT1K LTR MaLR -384 204 13 1253 161 70 80 chr5 190224682 190224828 -9405322 + AluJo SINE Alu 1 147 -165 2257 104 0 0 chr5 190224828 190225137 -9405013 + AluSc SINE Alu 1 309 0 1253 161 70 80 chr5 190225137 190225289 -9404861 + AluJo SINE Alu 147 296 -16 21 57 0 0 chr5 190225640 190225675 -9404475 + AT_rich Low_complexity Low_complexity 1 35 0 551 260 77 4 chr5 190225915 190226180 -9403970 - L1ME LINE L1 -702 5460 5173 189 74 0 0 chr5 190226205 190226232 -9403918 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2971 106 0 0 chr5 190226654 190226846 -9403304 + L1PA15 LINE L1 5132 5311 -854 2971 129 11 2 chr5 190226846 190227297 -9402853 + L1PA15 LINE L1 5709 6163 -2 2971 106 0 0 chr5 190227297 190228140 -9402010 + L1PA15 LINE L1 5311 6165 0 273 235 106 38 chr5 190228220 190228352 -9401798 + L1M4 LINE L1 4942 5082 -1064 1318 249 123 47 chr5 190228450 190228977 -9401173 - MLT1L LTR MaLR -38 577 11 1009 246 18 5 chr5 190229077 190229297 -9400853 - MER58A DNA MER1_type 0 224 2 415 247 0 0 chr5 190230318 190230395 -9399755 - L2 LINE L2 -3 3269 3193 1879 121 14 7 chr5 190230437 190230717 -9399433 + AluJb SINE Alu 14 295 -17 660 251 63 54 chr5 190230824 190231244 -9398906 - MLT1D LTR MaLR 0 467 1 375 309 58 69 chr5 190231249 190231572 -9398578 - L2 LINE L2 -217 3096 2769 797 151 8 0 chr5 190231572 190231698 -9398452 + FLAM_C SINE Alu 1 127 -16 24 0 0 0 chr5 190231708 190231732 -9398418 + AT_rich Low_complexity Low_complexity 1 24 0 242 258 16 16 chr5 190231740 190231802 -9398348 - L2 LINE L2 -536 2778 2717 694 125 0 0 chr5 190231959 190232055 -9398095 + U6 snRNA snRNA 1 96 -11 1465 172 54 98 chr5 190232127 190232535 -9397615 + MLT1B LTR MaLR 1 390 0 270 73 0 0 chr5 190233719 190233760 -9396390 + (TTGG)n Simple_repeat Simple_repeat 4 44 0 2357 173 65 23 chr5 190234126 190234729 -9395421 - Charlie2 DNA MER1_type -5 2857 2230 510 291 108 35 chr5 190234798 190235001 -9395149 - Charlie2 DNA MER1_type -2638 224 7 1933 157 36 134 chr5 190235144 190235704 -9394446 + MLT1D LTR MaLR 1 505 0 1485 87 0 19 chr5 190235960 190236166 -9393984 - AluSx SINE Alu -110 202 1 771 207 115 6 chr5 190236798 190236992 -9393158 - MIR SINE MIR 0 262 49 338 369 0 11 chr5 190237305 190237484 -9392666 + (TG)n Simple_repeat Simple_repeat 1 177 0 203 252 187 9 chr5 190238928 190239035 -9391115 - MIR SINE MIR -56 152 27 188 200 73 55 chr5 190239263 190239318 -9390832 - MIR SINE MIR -8 254 199 850 129 15 0 chr5 190239570 190239702 -9390448 + AluJo SINE Alu 2 135 -177 623 113 0 172 chr5 190239734 190239820 -9390330 + L1MB3 LINE L1 6056 6107 -76 1550 163 0 21 chr5 190239820 190240108 -9390042 + AluJo SINE Alu 1 282 -30 623 113 0 172 chr5 190240108 190240172 -9389978 + L1MB3 LINE L1 6107 6180 -3 1464 167 0 57 chr5 190240186 190240518 -9389632 + AluJo SINE Alu 1 315 0 920 273 43 24 chr5 190240626 190240879 -9389271 - MIR SINE MIR -4 258 1 1352 213 13 89 chr5 190242598 190242668 -9387482 - MLT1A1 LTR MaLR 0 365 291 16480 105 30 9 chr5 190242668 190242770 -9387380 - Tigger1 DNA MER2_type 0 2418 2320 2076 103 24 0 chr5 190242770 190243061 -9387089 + AluSp SINE Alu 1 298 -15 16480 105 30 9 chr5 190243061 190245325 -9384825 - Tigger1 DNA MER2_type -98 2320 3 1352 213 13 89 chr5 190245325 190245509 -9384641 - MLT1A1 LTR MaLR -74 291 149 2102 108 0 7 chr5 190245509 190245805 -9384345 + AluSp SINE Alu 1 294 -19 1352 213 13 89 chr5 190245805 190245944 -9384206 - MLT1A1 LTR MaLR -216 149 1 273 119 0 0 chr5 190246109 190246151 -9383999 + (TTG)n Simple_repeat Simple_repeat 2 43 0 1769 152 0 14 chr5 190246153 190246442 -9383708 - AluJo SINE Alu -27 285 1 253 252 78 39 chr5 190246509 190246612 -9383538 - L2 LINE L2 -3 3310 3204 4046 141 71 11 chr5 190246803 190247519 -9382631 + Tigger2 DNA MER2_type 1 759 -1959 1178 103 12 206 chr5 190247576 190247816 -9382334 + Tigger2 DNA MER2_type 2461 2625 -93 2118 135 143 8 chr5 190247816 190248193 -9381957 + MSTA LTR MaLR 1 428 0 1178 103 12 206 chr5 190248193 190248272 -9381878 + Tigger2 DNA MER2_type 2625 2718 0 1903 163 31 17 chr5 190248296 190248646 -9381504 - MLT2C1 LTR ERVL -42 355 1 2076 124 0 0 chr5 190249698 190249989 -9380161 + AluSx SINE Alu 1 291 -21 784 208 19 0 chr5 190250176 190250335 -9379815 - MIR SINE MIR -59 203 42 217 342 53 0 chr5 190250335 190250411 -9379739 - MIR SINE MIR -137 125 46 2399 120 83 10 chr5 190250460 190250859 -9379291 + MSTA LTR MaLR 1 428 0 824 137 0 8 chr5 190251385 190251509 -9378641 - FLAM_C SINE Alu -19 124 2 769 185 40 35 chr5 190252239 190252439 -9377711 - MER113 DNA MER1_type? -303 218 18 294 271 136 70 chr5 190253673 190253814 -9376336 + L2 LINE L2 2725 2855 -417 2583 143 34 0 chr5 190253814 190254226 -9375924 - MSTC LTR MaLR 0 428 3 294 271 136 70 chr5 190254226 190254529 -9375621 + L2 LINE L2 2855 3270 -2 536 326 52 22 chr5 190255230 190255460 -9374690 - MIR SINE MIR -6 256 20 486 0 0 0 chr5 190256023 190256077 -9374073 + (TA)n Simple_repeat Simple_repeat 1 54 0 385 275 88 29 chr5 190256212 190256383 -9373767 + MIR SINE MIR 32 212 -50 243 133 0 0 chr5 190256582 190256627 -9373523 + (CA)n Simple_repeat Simple_repeat 2 46 0 335 255 0 128 chr5 190256634 190256783 -9373367 - L2 LINE L2 -35 3278 3149 2536 62 0 10 chr5 190256881 190257185 -9372965 + AluY SINE Alu 1 301 -10 1400 92 0 0 chr5 190257192 190257365 -9372785 + AluSq SINE Alu 134 306 -7 214 300 160 27 chr5 190257369 190257519 -9372631 - L2 LINE L2 -436 2878 2709 183 330 11 21 chr5 190257702 190257796 -9372354 - L2 LINE L2 -785 2529 2437 228 173 120 27 chr5 190258060 190258135 -9372015 + MLT1L LTR MaLR 511 592 -23 305 313 75 67 chr5 190258242 190258616 -9371534 + L2 LINE L2 2896 3272 0 6398 181 41 31 chr5 190258984 190260527 -9369623 - Looper DNA T2_type 0 1558 1 1968 126 0 11 chr5 190261346 190261615 -9368535 - AluJo SINE Alu -18 294 29 211 314 0 19 chr5 190264398 190264503 -9365647 + G-rich Low_complexity Low_complexity 2 104 0 210 286 0 0 chr5 190265514 190265570 -9364580 + (CACG)n Simple_repeat Simple_repeat 3 58 0 266 153 17 0 chr5 190265908 190265967 -9364183 + GA-rich Low_complexity Low_complexity 3 62 0 608 228 137 64 chr5 190271355 190271574 -9358576 - MIR SINE MIR -10 252 18 22 0 0 0 chr5 190271897 190271919 -9358231 + AT_rich Low_complexity Low_complexity 1 22 0 253 283 111 0 chr5 190272431 190272530 -9357620 - MIR SINE MIR -55 207 98 183 222 0 0 chr5 190275730 190275766 -9354384 + MIR SINE MIR 221 256 -6 324 0 0 0 chr5 190275914 190275950 -9354200 + (TC)n Simple_repeat Simple_repeat 2 37 0 898 226 27 23 chr5 190277859 190278080 -9352070 - MER58A DNA MER1_type -2 222 1 533 288 136 21 chr5 190279988 190280179 -9349971 - MIR SINE MIR -22 240 28 236 301 26 44 chr5 190280672 190280785 -9349365 - MIR SINE MIR -103 159 49 417 201 298 24 chr5 190281661 190281836 -9348314 - MLT1G LTR MaLR 0 590 320 265 162 14 68 chr5 190282060 190282134 -9348016 + L2 LINE L2 3188 3257 -56 249 83 0 0 chr5 190282150 190282186 -9347964 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 244 294 20 103 chr5 190282460 190282664 -9347486 + MIR SINE MIR 76 262 0 192 77 0 0 chr5 190283261 190283287 -9346863 + (GGA)n Simple_repeat Simple_repeat 2 27 0 601 301 133 15 chr5 190284480 190284886 -9345264 - LTR16B LTR ERVL -7 457 4 210 37 0 0 chr5 190284906 190284933 -9345217 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 276 250 0 0 chr5 190285197 190285265 -9344885 + Charlie8 DNA MER1_type 113 180 -2237 2201 235 123 21 chr5 190285404 190286203 -9343947 + HAL1 LINE L1 1022 1901 -606 2747 228 56 42 chr5 190286275 190286542 -9343608 + L1ME3 LINE L1 5318 5580 -582 2117 132 0 26 chr5 190286542 190286874 -9343276 - AluSx SINE Alu 0 312 1 2747 228 56 42 chr5 190286874 190287429 -9342721 + L1ME3 LINE L1 5580 6151 -11 734 259 30 82 chr5 190287449 190287854 -9342296 + HAL1 LINE L1 2012 2395 -112 958 249 46 88 chr5 190287900 190287971 -9342179 - MLT1J LTR MaLR -4 507 435 2330 110 3 0 chr5 190287971 190288279 -9341871 + AluSq SINE Alu 1 309 -4 958 249 46 88 chr5 190288279 190288685 -9341465 - MLT1J LTR MaLR -76 435 50 268 253 55 22 chr5 190289069 190289160 -9340990 - MIR SINE MIR -81 181 88 626 99 0 11 chr5 190290588 190290679 -9339471 - AluJ/FLAM SINE Alu -211 101 12 219 295 39 0 chr5 190291084 190291162 -9338988 + GA-rich Low_complexity Low_complexity 3 83 0 625 220 115 154 chr5 190291189 190291381 -9338769 - MLT1K LTR MaLR -115 473 275 369 62 0 0 chr5 190291381 190291429 -9338721 + (CA)n Simple_repeat Simple_repeat 2 49 0 625 220 115 154 chr5 190291429 190291704 -9338446 - MLT1K LTR MaLR -313 275 24 631 205 0 0 chr5 190292701 190292813 -9337337 + FLAM_C SINE Alu 1 112 -31 324 120 0 0 chr5 190292816 190292866 -9337284 + (GGAGA)n Simple_repeat Simple_repeat 2 51 0 476 110 0 24 chr5 190292968 190293050 -9337100 + (GAAA)n Simple_repeat Simple_repeat 4 83 0 24 0 0 0 chr5 190293464 190293488 -9336662 + AT_rich Low_complexity Low_complexity 1 24 0 718 253 128 22 chr5 190293676 190294047 -9336103 - MLT1K LTR MaLR 0 588 156 1712 128 11 15 chr5 190294116 190294390 -9335760 + AluJo SINE Alu 2 274 -38 528 258 61 45 chr5 190294432 190294630 -9335520 + MIR SINE MIR 35 235 -27 208 233 0 0 chr5 190295002 190295045 -9335105 + GA-rich Low_complexity Low_complexity 1 43 0 469 281 91 83 chr5 190297164 190297417 -9332733 + MIR SINE MIR 8 262 0 773 214 123 14 chr5 190297701 190297921 -9332229 + MIR SINE MIR 13 256 -6 1247 25 0 0 chr5 190298237 190298394 -9331756 - L1PA4 LINE L1 0 6155 5999 212 357 50 21 chr5 190298956 190299096 -9331054 + L2 LINE L2 2906 3049 -223 285 303 37 9 chr5 190299384 190299493 -9330657 - MIR SINE MIR -119 143 32 856 91 0 76 chr5 190300064 190300196 -9329954 + AluJb SINE Alu 3 124 -188 400 329 99 14 chr5 190300525 190300738 -9329412 + MIR SINE MIR 22 252 -10 2455 80 7 0 chr5 190300758 190301058 -9329092 - AluSx SINE Alu -10 302 1 472 242 19 57 chr5 190301097 190301254 -9328896 - MLT1K LTR MaLR -24 564 414 * 516 211 0 0 chr5 190301250 190301340 -9328810 + 5S rRNA rRNA 1 90 -31 * 716 223 27 27 chr5 190301337 190301525 -9328625 - MLT1K LTR MaLR -153 435 248 405 263 73 29 chr5 190301762 190301899 -9328251 + MIR3 SINE MIR 17 159 -49 232 249 234 19 chr5 190301906 190302087 -9328063 - MER102a DNA MER1_type -1100 317 84 466 164 82 0 chr5 190302087 190302197 -9327953 + L1MB8 LINE L1 6051 6169 -9 232 249 234 19 chr5 190302197 190302224 -9327926 - MER102a DNA MER1_type -1333 84 64 1540 207 52 3 chr5 190302226 190302572 -9327578 + L1MB5 LINE L1 5801 6174 0 186 43 0 0 chr5 190302862 190302885 -9327265 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1575 164 3 67 chr5 190303710 190304009 -9326141 + AluJb SINE Alu 1 280 -32 476 198 0 9 chr5 190304114 190304230 -9325920 + GA-rich Low_complexity Low_complexity 4 118 0 196 191 0 43 chr5 190304232 190304279 -9325871 - MIR SINE MIR -68 194 150 276 207 219 0 chr5 190304284 190304366 -9325784 - Charlie8 DNA MER1_type -2233 184 85 489 218 128 0 chr5 190304380 190304513 -9325637 - MIR SINE MIR -109 153 4 607 217 153 48 chr5 190304558 190304723 -9325427 - Charlie8 DNA MER1_type -55 275 74 800 145 0 36 chr5 190304723 190304861 -9325289 + FLAM_C SINE Alu 1 133 0 607 217 153 48 chr5 190304861 190304944 -9325206 - Charlie8 DNA MER1_type -256 74 1 469 276 82 23 chr5 190305040 190305216 -9324934 + MIR SINE MIR 13 191 -41 23 0 0 0 chr5 190305546 190305569 -9324581 + AT_rich Low_complexity Low_complexity 1 23 0 332 308 117 33 chr5 190305771 190306011 -9324139 - L1MC/D LINE L1 -2032 5776 5517 2116 119 13 7 chr5 190306082 190306392 -9323758 + AluSx SINE Alu 1 312 0 491 264 82 20 chr5 190307230 190307434 -9322716 + MIR SINE MIR 32 256 -6 204 67 0 0 chr5 190307629 190307659 -9322491 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 803 168 0 8 chr5 190307799 190307930 -9322220 + FLAM_C SINE Alu 8 137 -6 702 163 23 0 chr5 190308217 190308346 -9321804 + MLT1B LTR MaLR 259 390 0 30 27 0 0 chr5 190308691 190308728 -9321422 + AT_rich Low_complexity Low_complexity 1 37 0 2177 122 29 11 chr5 190308728 190308894 -9321256 - L1MA1 LINE L1 0 6302 6141 392 175 0 0 chr5 190308894 190308974 -9321176 + MADE1 DNA Mariner 1 80 0 2177 122 29 11 chr5 190308974 190309184 -9320966 - L1MA1 LINE L1 -161 6141 5919 1302 79 0 0 chr5 190309196 190309386 -9320764 - L1MA1 LINE L1 -330 7391 7202 362 138 0 25 chr5 190309486 190309566 -9320584 + L1MA4 LINE L1 6222 6299 -1 505 144 58 29 chr5 190310673 190310812 -9319338 + Tigger6 DNA MER2_type 1308 1450 -147 249 129 65 0 chr5 190312426 190312519 -9317631 + (TA)n Simple_repeat Simple_repeat 2 100 0 2430 163 59 12 chr5 190312523 190313123 -9317027 - L1MA1 LINE L1 -509 7210 6589 1082 215 15 15 chr5 190313191 190313456 -9316694 + L1M1 LINE L1 1 265 -7300 1465 303 98 22 chr5 190313857 190314653 -9315497 + L2 LINE L2 2424 3282 -31 3141 216 29 9 chr5 190314759 190315669 -9314481 - L1MA1 LINE L1 -2520 5045 4118 703 201 71 0 chr5 190315675 190315829 -9314321 - L1MA1 LINE L1 -6891 674 510 1966 160 20 11 chr5 190315929 190316285 -9313865 + THE1C LTR MaLR 17 375 0 227 215 15 0 chr5 190317283 190317348 -9312802 + GA-rich Low_complexity Low_complexity 3 68 0 1839 81 0 0 chr5 190318457 190318691 -9311459 - AluY SINE Alu -75 236 3 3457 221 2 2 chr5 190318696 190319520 -9310630 - L1 LINE L1 -3213 2933 2110 1913 123 67 22 chr5 190319750 190320109 -9310041 - THE1C LTR MaLR 0 375 1 1598 152 56 4 chr5 190321497 190322015 -9308135 + L1P4 LINE L1 4963 5501 -664 4464 38 3 2 chr5 190322118 190322695 -9307455 - L1HS LINE L1 -1 6154 5577 1016 148 23 51 chr5 190322695 190322911 -9307239 + THE1B LTR MaLR 155 364 0 23 0 0 0 chr5 190322992 190323015 -9307135 + AT_rich Low_complexity Low_complexity 1 23 0 249 314 40 32 chr5 190323369 190323493 -9306657 - MIR SINE MIR -130 132 8 8294 133 10 27 chr5 190323716 190325380 -9304770 - L1 LINE L1 -3778 3787 2153 3043 191 16 4 chr5 190325483 190326158 -9303992 + L1 LINE L1 3913 4595 -1551 976 189 94 0 chr5 190326153 190326341 -9303809 + L1 LINE L1 5101 5317 -829 * 411 21 0 0 chr5 190326341 190326389 -9303761 + (CAT)n Simple_repeat Simple_repeat 2 49 0 976 189 94 0 chr5 190326389 190326433 -9303717 + L1 LINE L1 5317 5355 -791 789 110 8 0 chr5 190326433 190326551 -9303599 - L1PA14 LINE L1 -9 6152 6034 4096 231 51 9 chr5 190326651 190327933 -9302217 - L1M4 LINE L1 -1242 4904 3569 354 338 60 66 chr5 190328369 190328953 -9301197 + L2 LINE L2 2478 3055 -217 664 201 30 0 chr5 190329114 190329278 -9300872 - L1 LINE L1 -1008 5138 4970 287 278 10 0 chr5 190329385 190329482 -9300668 + L1MA8 LINE L1 6192 6289 -2 1302 202 174 3 chr5 190329596 190329947 -9300203 + LTR45B LTR ERV1 3 413 -76 378 0 0 0 chr5 190330370 190330412 -9299738 + (TA)n Simple_repeat Simple_repeat 2 43 0 933 274 35 0 chr5 190330416 190330756 -9299394 + L1PBa LINE L1 6 357 -6506 479 248 57 0 chr5 190331275 190331416 -9298734 - Charlie1b DNA MER1_type -326 197 49 328 236 55 0 chr5 190331745 190331872 -9298278 + (TA)n Simple_repeat Simple_repeat 2 135 0 21 0 0 0 chr5 190331957 190331978 -9298172 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 190332674 190332695 -9297455 + AT_rich Low_complexity Low_complexity 1 21 0 336 170 53 0 chr5 190333841 190333935 -9296215 + GA-rich Low_complexity Low_complexity 4 102 0 4114 213 20 17 chr5 190334404 190335040 -9295110 + L1 LINE L1 3787 4429 -1717 1880 138 58 25 chr5 190335040 190335403 -9294747 + THE1C LTR MaLR 1 375 0 4114 213 20 17 chr5 190335403 190335823 -9294327 + L1 LINE L1 4429 4846 -1300 6082 98 22 6 chr5 190335932 190336884 -9293266 + HERVH LTR ERV1 6743 7709 -4 7345 115 7 30 chr5 190336884 190338134 -9292016 - HERVH LTR ERV1 -5095 2618 1398 1520 231 54 9 chr5 190338234 190338659 -9291491 + Tigger6a DNA MER2_type 382 825 -258 453 209 72 46 chr5 190338663 190338773 -9291377 - L1MD2 LINE L1 -114 6245 6128 192 40 0 0 chr5 190338773 190338798 -9291352 + (TG)n Simple_repeat Simple_repeat 2 26 0 453 209 72 46 chr5 190338798 190338840 -9291310 - L1MD2 LINE L1 -231 6128 6089 1009 191 4 33 chr5 190339151 190339423 -9290727 + Tigger6a DNA MER2_type 819 1082 -1 2407 68 14 0 chr5 190340586 190340881 -9289269 - AluY SINE Alu -9 302 4 354 355 44 47 chr5 190341797 190342093 -9288057 - L3 LINE CR1 -4 1573 1279 1986 111 27 0 chr5 190342409 190342707 -9287443 + L1PA13 LINE L1 5858 6163 0 24 0 0 0 chr5 190342992 190343016 -9287134 + AT_rich Low_complexity Low_complexity 1 24 0 534 295 0 17 chr5 190344017 190344183 -9285967 - MIR SINE MIR -62 146 24 315 264 16 33 chr5 190344503 190344624 -9285526 + MLT1L LTR MaLR 150 268 -347 268 321 9 0 chr5 190344827 190344939 -9285211 + MLT1L LTR MaLR 503 615 0 2075 144 7 0 chr5 190345114 190345420 -9284730 - AluSx SINE Alu -2 310 3 216 0 0 0 chr5 190346130 190346154 -9283996 + (TC)n Simple_repeat Simple_repeat 1 24 0 2348 87 10 0 chr5 190346154 190346453 -9283697 - AluY SINE Alu -9 302 1 422 252 65 38 chr5 190347545 190347988 -9282162 + LTR33 LTR ERVL 1 494 -27 254 338 70 6 chr5 190348043 190348058 -9282092 + L2 LINE L2 2922 2935 -337 2280 115 0 6 chr5 190348058 190348372 -9281778 - AluSx SINE Alu 0 312 1 254 338 70 6 chr5 190348372 190348513 -9281637 + L2 LINE L2 2935 3088 -184 311 160 0 0 chr5 190350252 190350302 -9279848 + L2 LINE L2 3262 3311 -2 228 278 0 0 chr5 190351289 190351343 -9278807 + MIR SINE MIR 84 137 -125 235 209 49 38 chr5 190352572 190352661 -9277489 - MIR SINE MIR -63 145 103 200 246 207 0 chr5 190353220 190353278 -9276872 + MIR SINE MIR 38 106 -102 639 221 198 23 chr5 190353286 190353503 -9276647 - MIR SINE MIR -3 259 5 393 184 39 10 chr5 190354579 190354682 -9275468 - MER113 DNA MER1_type? -415 106 1 22 0 0 0 chr5 190354905 190354927 -9275223 + AT_rich Low_complexity Low_complexity 1 22 0 2325 52 3 0 chr5 190354927 190355213 -9274937 - L1PA7 LINE L1 -4 6150 5864 393 276 16 8 chr5 190355276 190355399 -9274751 + MIR SINE MIR 86 209 -53 1146 217 91 29 chr5 190356000 190356341 -9273809 + MER74A LTR ERVL 1 362 -196 996 202 87 29 chr5 190356787 190357064 -9273086 + L1MD2 LINE L1 5849 6141 -218 635 218 14 0 chr5 190357677 190357824 -9272326 - L1MD2 LINE L1 -16 6343 6195 3443 206 38 10 chr5 190357828 190358619 -9271531 - L1MD2 LINE L1 -218 6141 5329 437 257 149 7 chr5 190358979 190359127 -9271023 - MIR SINE MIR -74 188 20 2081 111 49 25 chr5 190359284 190359630 -9270520 - THE1C LTR MaLR -22 374 1 463 248 148 14 chr5 190359823 190360221 -9269929 - LTR33 LTR ERVL 0 521 23 1449 212 128 6 chr5 190360234 190360592 -9269558 + MLT1D LTR MaLR 4 405 -100 832 143 68 14 chr5 190360599 190360746 -9269404 - L1PA16 LINE L1 -20 6146 5992 180 152 0 0 chr5 190360746 190360779 -9269371 + CT-rich Low_complexity Low_complexity 2 34 0 667 178 8 8 chr5 190360779 190360908 -9269242 - L1PA16 LINE L1 -146 6020 5892 489 241 0 9 chr5 190360912 190361024 -9269126 + MLT1D LTR MaLR 395 505 0 1879 194 136 2 chr5 190361376 190361794 -9268356 - MLT1D LTR MaLR -31 474 1 1808 189 0 0 chr5 190362681 190363028 -9267122 + AluJb SINE Alu 1 312 0 1258 212 40 72 chr5 190363059 190363436 -9266714 - MLT1A1 LTR MaLR 0 365 1 183 80 0 0 chr5 190363442 190363467 -9266683 + (A)n Simple_repeat Simple_repeat 1 25 0 1100 269 26 16 chr5 190363646 190363958 -9266192 - MLT1K LTR MaLR -258 330 16 209 148 37 37 chr5 190364774 190364828 -9265322 + A-rich Low_complexity Low_complexity 5 58 0 289 215 65 43 chr5 190364829 190364922 -9265228 - MLT1K LTR MaLR -36 552 458 285 255 138 11 chr5 190364941 190365035 -9265115 + L2 LINE L2 3203 3308 -5 189 107 0 0 chr5 190365122 190365150 -9265000 + (TC)n Simple_repeat Simple_repeat 1 28 0 189 74 0 0 chr5 190365228 190365255 -9264895 - MIR SINE MIR -65 143 117 658 295 142 3 chr5 190366342 190366667 -9263483 + L3 LINE CR1 473 842 -735 294 73 0 0 chr5 190367301 190367342 -9262808 + (CA)n Simple_repeat Simple_repeat 2 42 0 682 218 35 57 chr5 190369641 190369870 -9260280 + MLT1C LTR MaLR 51 274 -193 239 105 0 26 chr5 190369934 190369972 -9260178 + MLT1C LTR MaLR 312 348 -42 331 227 142 14 chr5 190370599 190370740 -9259410 + MIR SINE MIR 70 228 -34 310 148 0 19 chr5 190371760 190371814 -9258336 - AluJb SINE Alu -5 297 245 1026 145 0 25 chr5 190371814 190371973 -9258177 - AluJb SINE Alu -157 155 1 1494 165 8 0 chr5 190372123 190372360 -9257790 - AluJo SINE Alu -11 301 63 3408 202 13 4 chr5 190373427 190373623 -9256527 + L1MC3 LINE L1 6902 7095 -690 2017 150 0 3 chr5 190373623 190373930 -9256220 - AluJb SINE Alu -6 306 1 3408 202 13 4 chr5 190373930 190374411 -9255739 + L1MC3 LINE L1 7095 7585 -200 1089 137 47 19 chr5 190374412 190374624 -9255526 + L1MC2 LINE L1 6127 6344 0 1120 252 102 21 chr5 190374928 190375253 -9254897 + MLT1G1 LTR MaLR 245 595 0 1376 174 53 31 chr5 190375494 190375833 -9254317 + MER33 DNA MER1_type 1 324 0 478 208 28 0 chr5 190375865 190375971 -9254179 - MER103 DNA DNA -17 149 41 305 245 20 86 chr5 190376024 190376175 -9253975 + L2 LINE L2 2988 3128 -185 1000 239 101 13 chr5 190376206 190376591 -9253559 - LTR33 LTR ERVL -1 520 102 210 260 82 14 chr5 190376622 190376695 -9253455 + L2 LINE L2 3182 3259 -54 1278 246 81 18 chr5 190376843 190377237 -9252913 - L1ME3A LINE L1 -7 6163 5745 265 269 67 0 chr5 190377254 190377358 -9252792 - L1ME3A LINE L1 -1629 4517 4407 296 182 15 0 chr5 190377384 190377450 -9252700 - L1ME LINE L1 -431 5731 5665 230 94 19 38 chr5 190377456 190377509 -9252641 + LTR66 LTR ERVL 389 440 -170 227 111 0 56 chr5 190377526 190377580 -9252570 - LTR66 LTR ERVL -171 439 389 263 174 41 133 chr5 190377586 190377684 -9252466 - L1ME LINE L1 -523 5647 5559 4764 274 73 32 chr5 190378154 190378271 -9251879 - L1ME LINE L1 -916 5230 5119 324 0 0 0 chr5 190378271 190378307 -9251843 + (TG)n Simple_repeat Simple_repeat 1 36 0 4764 274 73 32 chr5 190378307 190381124 -9249026 - L1ME LINE L1 -1027 5119 2110 2286 286 74 33 chr5 190381166 190382439 -9247711 + L2 LINE L2 1982 3312 -1 195 299 60 67 chr5 190382443 190382577 -9247573 - MIR SINE MIR -78 184 52 420 243 9 28 chr5 190382974 190383081 -9247069 - L2 LINE L2 0 3272 3168 2439 107 0 0 chr5 190383318 190383626 -9246524 + AluSx SINE Alu 1 308 -4 627 241 43 25 chr5 190383703 190383865 -9246285 + MLT1J2 LTR MaLR 16 180 -270 323 220 0 0 chr5 190383877 190383936 -9246214 + MLT1J1 LTR MaLR 263 321 -125 804 296 129 6 chr5 190384076 190384417 -9245733 + MLT1J2 LTR MaLR 67 449 -1 319 296 31 10 chr5 190384547 190384645 -9245505 + L2 LINE L2 3164 3263 -9 541 228 72 42 chr5 190385258 190385451 -9244699 - L2 LINE L2 -1 3312 3114 2546 69 0 3 chr5 190385600 190385904 -9244246 + AluY SINE Alu 2 304 -7 352 271 62 42 chr5 190386091 190386240 -9243910 - MLT1K LTR MaLR -17 571 416 1237 33 11 28 chr5 190386240 190386422 -9243728 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 352 271 62 42 chr5 190386422 190386464 -9243686 - MLT1K LTR MaLR -172 416 376 950 100 36 0 chr5 190386469 190386609 -9243541 - MSTB1 LTR MaLR -5 427 283 712 194 51 0 chr5 190386633 190386808 -9243342 + Charlie5 DNA MER1_type 2402 2585 -27 1434 199 97 26 chr5 190386941 190387322 -9242828 - L1ME1 LINE L1 -20 6215 5808 232 125 6 0 chr5 190387322 190387372 -9242778 - MLT2B1 LTR ERVL -6 514 358 1547 222 31 41 chr5 190387410 190387897 -9242253 - L1ME1 LINE L1 -959 5256 4775 839 249 12 91 chr5 190389356 190389698 -9240452 - L1ME1 LINE L1 -4 6162 5848 533 194 35 47 chr5 190389694 190389864 -9240286 + L1M4 LINE L1 3631 3798 -2348 * 4013 238 73 28 chr5 190389896 190390341 -9239809 - L1ME1 LINE L1 -5002 1394 970 2409 76 3 0 chr5 190390341 190390632 -9239518 - AluY SINE Alu -17 294 3 4013 238 73 28 chr5 190390632 190391372 -9238778 - L1ME1 LINE L1 -5426 970 143 1803 197 25 30 chr5 190391372 190391737 -9238413 + MLT1A1 LTR MaLR 3 365 0 4013 238 73 28 chr5 190391737 190391852 -9238298 - L1ME1 LINE L1 -6253 143 35 744 254 98 30 chr5 190393430 190393694 -9236456 + L2 LINE L2 3032 3313 0 243 0 0 0 chr5 190393980 190394007 -9236143 + (CA)n Simple_repeat Simple_repeat 2 28 0 1358 262 201 17 chr5 190394194 190394318 -9235832 + L2 LINE L2 1657 1757 -1557 1866 146 66 33 chr5 190394318 190394681 -9235469 + THE1C LTR MaLR 1 375 0 1358 262 201 17 chr5 190394681 190395360 -9234790 + L2 LINE L2 1757 2608 -706 2280 223 28 32 chr5 190395362 190395896 -9234254 + MLT1F LTR MaLR 1 532 -10 228 274 16 0 chr5 190395922 190395984 -9234166 + L2 LINE L2 2657 2719 -595 599 264 85 30 chr5 190395984 190396401 -9233749 + L1M4c LINE L1 1075 1524 -4860 1590 239 65 12 chr5 190396411 190396921 -9233229 + L1M4c LINE L1 1794 2330 -4233 1006 228 52 9 chr5 190397985 190398217 -9231933 + MLT1A1 LTR MaLR 1 242 -123 2114 123 25 87 chr5 190398230 190398419 -9231731 - L1MA4 LINE L1 -21 6279 6080 2304 106 10 0 chr5 190398419 190398720 -9231430 - AluSx SINE Alu -8 304 1 2114 123 25 87 chr5 190398720 190398978 -9231172 - L1MA4 LINE L1 -220 6080 5860 545 283 128 59 chr5 190399077 190399516 -9230634 + MLT1L LTR MaLR 142 610 -5 834 190 12 0 chr5 190399845 190400008 -9230142 - MER5A DNA MER1_type -24 165 1 399 321 168 22 chr5 190400142 190400553 -9229597 - L2 LINE L2 -15 3298 2828 249 188 32 41 chr5 190401649 190401729 -9228421 + MIR SINE MIR 36 115 -93 414 235 211 0 chr5 190401816 190401982 -9228168 - MIR SINE MIR -13 249 49 222 308 150 8 chr5 190402371 190402504 -9227646 + MIR SINE MIR 90 241 -21 323 270 186 37 chr5 190403222 190403518 -9226632 + MLT1J LTR MaLR 102 441 -70 229 183 17 33 chr5 190403667 190403727 -9226423 + MLT1L LTR MaLR 552 610 -5 394 264 115 7 chr5 190404573 190404721 -9225429 + MER103 DNA DNA 3 166 0 338 264 68 19 chr5 190404961 190405134 -9225016 + MIR SINE MIR 36 214 -48 184 274 203 24 chr5 190405531 190405743 -9224407 + L2 LINE L2 2809 3058 -255 2195 130 14 8 chr5 190406572 190406925 -9223225 - L1MB5 LINE L1 -1 6173 5819 2311 107 3 0 chr5 190406925 190407225 -9222925 - AluSx SINE Alu -11 301 1 315 256 112 11 chr5 190408073 190408247 -9221903 + MIR SINE MIR 47 242 -20 4195 45 0 2 chr5 190408461 190408970 -9221180 + L1PA8 LINE L1 5660 6167 -5 512 295 44 26 chr5 190409225 190409452 -9220698 - MIR SINE MIR -1 261 31 4220 125 29 27 chr5 190409475 190409898 -9220252 + L1MA9 LINE L1 5227 5652 -660 2215 155 114 5 chr5 190409898 190410284 -9219866 + MSTA LTR MaLR 1 428 0 4220 125 29 27 chr5 190410284 190410656 -9219494 + L1MA9 LINE L1 5652 6021 -291 985 72 24 18 chr5 190411033 190411199 -9218951 + (GAAA)n Simple_repeat Simple_repeat 1 167 0 885 147 21 31 chr5 190411301 190411492 -9218658 + L1MA7 LINE L1 5833 6021 -270 1105 66 31 13 chr5 190411871 190412097 -9218053 + (GAAA)n Simple_repeat Simple_repeat 1 231 0 462 246 52 8 chr5 190412127 190412261 -9217889 + MIR SINE MIR 61 200 -62 333 242 0 0 chr5 190412467 190412558 -9217592 + (TG)n Simple_repeat Simple_repeat 2 92 0 184 314 217 0 chr5 190412673 190412848 -9217302 - L2 LINE L2 -260 3053 2841 465 252 136 19 chr5 190413648 190413803 -9216347 - MIR SINE MIR -58 204 32 533 247 28 69 chr5 190414367 190414614 -9215536 + LTR33 LTR ERVL 31 267 -254 303 320 20 20 chr5 190415055 190415205 -9214945 - L1MC/D LINE L1 -2039 5769 5620 24 24 0 24 chr5 190415440 190415454 -9214696 + AT_rich Low_complexity Low_complexity 1 14 -27 2263 95 0 0 chr5 190415454 190415739 -9214411 + AluSx SINE Alu 1 285 -27 24 24 0 24 chr5 190415739 190415766 -9214384 + AT_rich Low_complexity Low_complexity 14 41 0 226 282 64 45 chr5 190415992 190416102 -9214048 - L2 LINE L2 -20 3252 3141 351 342 103 13 chr5 190416120 190416275 -9213875 - MER5B DNA MER1_type -1 177 9 366 262 103 78 chr5 190416415 190416718 -9213432 + Charlie8 DNA MER1_type 77 442 -1975 2882 7 0 0 chr5 190416718 190417021 -9213129 - AluYa5 SINE Alu -8 303 1 366 262 103 78 chr5 190417021 190417097 -9213053 + Charlie8 DNA MER1_type 442 515 -1902 203 273 40 81 chr5 190417162 190417244 -9212906 + MIR SINE MIR 55 134 -74 1109 188 18 40 chr5 190417244 190417468 -9212682 + MER20 DNA MER1_type 1 219 0 203 273 40 81 chr5 190417468 190417484 -9212666 + MIR SINE MIR 134 149 -59 1089 247 84 21 chr5 190417767 190418147 -9212003 + MLT1I LTR MaLR 3 406 -3 1310 253 91 5 chr5 190418157 190418599 -9211551 - MER113 DNA MER1_type? -27 494 15 238 271 0 0 chr5 190418799 190418847 -9211303 + L2 LINE L2 3262 3309 -4 183 80 0 0 chr5 190419410 190419435 -9210715 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 570 270 141 23 chr5 190419500 190419763 -9210387 + MLT1G LTR MaLR 2 295 -300 836 232 71 0 chr5 190419812 190420023 -9210127 + MLT1G LTR MaLR 365 590 0 24 0 0 0 chr5 190420154 190420178 -9209972 + AT_rich Low_complexity Low_complexity 1 24 0 609 226 0 8 chr5 190420185 190420309 -9209841 - FLAM_C SINE Alu -16 127 5 342 277 66 22 chr5 190422109 190422246 -9207904 - L3 LINE CR1 -9 1568 1426 247 358 54 34 chr5 190422426 190422574 -9207576 - MIR SINE MIR -66 196 46 592 233 153 22 chr5 190422747 190422975 -9207175 + L3b LINE CR1 1154 1411 -172 432 294 65 18 chr5 190423280 190423450 -9206700 + MIR SINE MIR 69 246 -16 2297 104 0 0 chr5 190423514 190423811 -9206339 - AluSq SINE Alu -16 297 1 316 296 19 10 chr5 190424151 190424261 -9205889 + MIR SINE MIR 44 153 -65 608 141 141 0 chr5 190424817 190424938 -9205212 - MER20 DNA MER1_type -18 201 64 216 213 0 0 chr5 190425166 190425227 -9204923 + GA-rich Low_complexity Low_complexity 2 62 0 433 280 59 8 chr5 190426881 190426999 -9203151 - MER91C DNA MER1_type -14 126 3 229 233 27 14 chr5 190427061 190427134 -9203016 + MLT1K LTR MaLR 513 586 -2 569 231 16 108 chr5 190427925 190428005 -9202145 - MLT1F1 LTR MaLR -398 169 114 2422 83 3 0 chr5 190428005 190428305 -9201845 + AluSx SINE Alu 1 301 -11 569 231 16 108 chr5 190428305 190428410 -9201740 - MLT1F1 LTR MaLR -453 114 1 1130 148 8 93 chr5 190428503 190428739 -9201411 - MER20 DNA MER1_type 0 219 4 4284 248 89 81 chr5 190428883 190429173 -9200977 - HAL1 LINE L1 -42 2465 2179 2651 62 0 0 chr5 190429173 190429482 -9200668 - AluY SINE Alu -2 309 1 4284 248 89 81 chr5 190429482 190429806 -9200344 - HAL1 LINE L1 -328 2179 1859 1185 209 74 115 chr5 190429806 190430293 -9199857 + MLT1C LTR MaLR 1 467 0 4284 248 89 81 chr5 190430293 190430921 -9199229 - HAL1 LINE L1 -648 1859 1238 1932 126 43 20 chr5 190430921 190431223 -9198927 - AluSg1 SINE Alu 0 309 1 4284 248 89 81 chr5 190431223 190432411 -9197739 - HAL1 LINE L1 -1269 1238 13 1502 243 163 27 chr5 190432814 190433550 -9196600 - L2 LINE L2 -30 3242 2284 647 309 73 13 chr5 190433517 190433750 -9196400 - MIR SINE MIR -3 259 13 * 661 274 70 11 chr5 190433876 190434062 -9196088 + MIR SINE MIR 17 213 -49 377 287 173 0 chr5 190435332 190435482 -9194668 - MIR SINE MIR -6 256 81 325 321 9 9 chr5 190435573 190435679 -9194471 - MIR3 SINE MIR -10 198 93 2439 109 0 0 chr5 190436408 190436721 -9193429 - AluSq SINE Alu 0 313 1 739 256 14 14 chr5 190436744 190436951 -9193199 + MIR SINE MIR 37 243 -19 256 267 0 17 chr5 190437063 190437123 -9193027 - MIR SINE MIR -112 96 38 555 261 62 25 chr5 190437392 190437633 -9192517 - MER20B DNA MER1_type -29 754 505 1289 217 27 3 chr5 190437755 190438054 -9192096 - MER20B DNA MER1_type -302 481 176 1239 278 45 2 chr5 190438121 190438720 -9191430 + L1ME3A LINE L1 5078 5755 -415 482 217 17 0 chr5 190438721 190438841 -9191309 + L1ME3A LINE L1 5831 5952 -218 525 264 14 69 chr5 190438882 190439098 -9191052 - MLT1J LTR MaLR -77 434 231 252 360 43 7 chr5 190439901 190440040 -9190110 + MIR SINE MIR 45 188 -74 772 209 31 15 chr5 190440137 190440333 -9189817 - L1MB8 LINE L1 0 6178 5980 816 284 92 9 chr5 190440424 190440762 -9189388 - MER115 DNA AcHobo -19 674 309 194 299 65 0 chr5 190441507 190441584 -9188566 - MIR SINE MIR -4 258 177 2135 178 58 5 chr5 190441642 190442052 -9188098 + MSTB1 LTR MaLR 1 432 0 762 234 18 6 chr5 190442055 190442226 -9187924 + MER5A DNA MER1_type 14 186 -3 382 162 27 0 chr5 190442270 190442353 -9187797 - Tigger4(Zombi) DNA MER2_type 0 2731 1 296 189 0 0 chr5 190442306 190442359 -9187791 + MER46A DNA MER2_type 98 150 -86 * 621 266 64 6 chr5 190442364 190442537 -9187613 - MIR SINE MIR 0 262 80 21 0 0 0 chr5 190442602 190442623 -9187527 + AT_rich Low_complexity Low_complexity 1 21 0 789 232 54 89 chr5 190442745 190443094 -9187056 - MER102b DNA MER1_type -4 337 1 218 279 0 0 chr5 190443579 190443647 -9186503 + (TAA)n Simple_repeat Simple_repeat 1 68 0 1354 165 190 124 chr5 190443695 190444179 -9185971 - MLT2B1 LTR ERVL -3 517 2 2125 83 7 4 chr5 190444216 190444494 -9185656 + AluSg SINE Alu 1 279 -31 228 111 0 0 chr5 190444498 190444534 -9185616 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 1273 187 55 35 chr5 190444631 190444978 -9185172 - L1MC4 LINE L1 -1 8041 7688 1846 210 58 23 chr5 190446451 190446932 -9183218 - MLT1D LTR MaLR -3 502 5 824 255 86 64 chr5 190447167 190447575 -9182575 - LTR33 LTR ERVL 0 521 105 352 239 122 39 chr5 190447949 190448129 -9182021 - LTR67 LTR ERVL -4 553 359 367 261 117 39 chr5 190448173 190448403 -9181747 - LTR67 LTR ERVL -307 250 3 229 252 174 0 chr5 190449026 190449141 -9181009 - MLT1F-int LTR MaLR -913 458 324 430 298 77 0 chr5 190449147 190449328 -9180822 - MLT1F-int LTR MaLR -1172 199 5 2751 178 30 28 chr5 190449332 190449872 -9180278 - MLT1F LTR MaLR 0 542 2 204 200 0 0 chr5 190449895 190449940 -9180210 + (TATATG)n Simple_repeat Simple_repeat 5 49 0 294 243 21 21 chr5 190449959 190450099 -9180051 - L1ME4a LINE L1 -11 6110 5971 464 308 73 24 chr5 190450200 190450528 -9179622 - L1ME4a LINE L1 -297 5824 5481 378 262 79 20 chr5 190450560 190450803 -9179347 + L1MC/D LINE L1 5218 5468 -718 219 167 191 12 chr5 190450846 190450930 -9179220 + L2 LINE L2 2871 2969 -303 336 306 0 15 chr5 190451083 190451217 -9178933 + L1MC/D LINE L1 5684 5815 -1993 997 209 0 25 chr5 190451221 190451422 -9178728 + MIR SINE MIR 3 198 -64 348 103 0 0 chr5 190451545 190451603 -9178547 + (CA)n Simple_repeat Simple_repeat 2 59 0 725 207 10 66 chr5 190452178 190452376 -9177774 + MER53 DNA DNA 1 187 -2 599 176 35 63 chr5 190452564 190452706 -9177444 - MER5B DNA MER1_type -39 139 2 270 193 0 0 chr5 190452723 190452780 -9177370 + (TG)n Simple_repeat Simple_repeat 1 57 0 302 297 37 46 chr5 190454211 190454432 -9175718 + L1M4 LINE L1 5426 5645 -529 1445 246 72 32 chr5 190454722 190455194 -9174956 + MLT1H1 LTR MaLR 1 491 -64 2497 106 31 19 chr5 190455211 190455571 -9174579 - THE1B LTR MaLR 0 364 1 12480 80 3 6 chr5 190455571 190457156 -9172994 - THE1B-int LTR MaLR 0 1580 1 1536 128 19 34 chr5 190457160 190457425 -9172725 - THE1B LTR MaLR -4 360 100 26 0 0 0 chr5 190457473 190457499 -9172651 + AT_rich Low_complexity Low_complexity 1 26 0 3369 206 33 16 chr5 190457851 190458245 -9171905 + L1M4 LINE L1 4147 4533 -1613 1805 153 71 102 chr5 190458245 190458723 -9171427 + MLT1C LTR MaLR 5 467 0 3369 206 33 16 chr5 190458723 190459150 -9171000 + L1M4 LINE L1 4533 4982 -1164 2227 121 0 10 chr5 190459220 190459526 -9170624 + AluSg SINE Alu 1 303 -7 3311 158 67 14 chr5 190459564 190460252 -9169898 - L1MC3 LINE L1 -3 7782 7059 194 255 0 21 chr5 190461618 190461665 -9168485 + MIR SINE MIR 29 74 -188 1514 190 62 46 chr5 190462677 190463045 -9167105 + MLT1A2 LTR MaLR 1 374 0 400 289 121 6 chr5 190463125 190463298 -9166852 - MER115 DNA AcHobo -485 208 16 741 250 23 6 chr5 190463302 190463478 -9166672 + MIR SINE MIR 57 235 -27 28 29 0 0 chr5 190463908 190463943 -9166207 + AT_rich Low_complexity Low_complexity 1 35 0 979 218 19 78 chr5 190464735 190465006 -9165144 - MIR SINE MIR -5 257 3 326 311 95 37 chr5 190465191 190465381 -9164769 + MIR SINE MIR 45 245 -17 330 284 86 0 chr5 190465565 190465681 -9164469 + MIR SINE MIR 13 138 -124 219 304 96 44 chr5 190466355 190466490 -9163660 - MIR3 SINE MIR -64 144 3 394 211 89 49 chr5 190466523 190466646 -9163504 - MIR3 SINE MIR -39 169 42 493 281 62 39 chr5 190466911 190467089 -9163061 - MIR SINE MIR -54 208 27 331 305 21 43 chr5 190467369 190467526 -9162624 + MIR SINE MIR 41 195 -63 682 115 0 39 chr5 190467705 190467748 -9162402 + (TCCC)n Simple_repeat Simple_repeat 1 44 -131 180 0 0 0 chr5 190467748 190467768 -9162382 + (CATCC)n Simple_repeat Simple_repeat 1 20 0 682 115 0 39 chr5 190467768 190467906 -9162244 + (TCCC)n Simple_repeat Simple_repeat 44 175 0 3415 207 124 52 chr5 190469803 190470144 -9160006 + L1MC4 LINE L1 6746 7061 -981 2128 126 0 10 chr5 190470144 190470437 -9159713 + AluSx SINE Alu 1 290 -22 3415 207 124 52 chr5 190470437 190471171 -9158979 + L1MC4 LINE L1 7061 7899 -143 233 143 0 0 chr5 190471187 190471229 -9158921 + L1MC4 LINE L1 8001 8042 0 2357 138 20 5 chr5 190471303 190471695 -9158455 + L1MB3 LINE L1 5771 6168 -15 2160 147 65 30 chr5 190472262 190472638 -9157512 - MER65A LTR ERV1 0 445 51 2236 105 13 3 chr5 190472638 190472942 -9157208 - AluSx SINE Alu -5 307 1 2160 147 65 30 chr5 190472942 190472995 -9157155 - MER65A LTR ERV1 -394 51 1 222 348 0 11 chr5 190473199 190473288 -9156862 + L2 LINE L2 3188 3275 -38 439 200 62 55 chr5 190473466 190473611 -9156539 + L1MD1 LINE L1 6096 6241 -1 207 0 0 0 chr5 190474144 190474167 -9155983 + (T)n Simple_repeat Simple_repeat 1 23 0 614 138 261 0 chr5 190475114 190475252 -9154898 - MER5A DNA MER1_type -15 174 1 456 259 146 13 chr5 190477012 190477170 -9152980 + MER5A DNA MER1_type 11 189 0 1353 231 55 26 chr5 190480595 190480957 -9149193 + MLT1A1 LTR MaLR 1 364 -1 185 219 178 55 chr5 190481802 190481875 -9148275 + MIR SINE MIR 166 247 -15 947 255 92 21 chr5 190482052 190482433 -9147717 - L1MD2 LINE L1 -3 6356 5949 613 116 53 0 chr5 190484404 190484499 -9145651 - MER5A DNA MER1_type -89 100 1 525 135 22 11 chr5 190484647 190484736 -9145414 - Tigger7 DNA MER2_type -2 2585 2496 413 132 0 15 chr5 190484745 190484813 -9145337 - Tigger7 DNA MER2_type -402 331 265 251 143 20 0 chr5 190484812 190484861 -9145289 - Tigger7 DNA MER2_type -683 50 1 * 181 325 231 0 chr5 190485082 190485199 -9144951 + L2 LINE L2 3124 3267 -5 276 172 0 0 chr5 190486411 190486469 -9143681 + (CGG)n Simple_repeat Simple_repeat 2 59 0 209 367 18 28 chr5 190486818 190486927 -9143223 + MER5A DNA MER1_type 44 151 -38 231 207 58 23 chr5 190487018 190487105 -9143045 - L1ME4a LINE L1 -6 6115 6026 405 305 122 25 chr5 190487153 190487350 -9142800 - MIR SINE MIR 0 262 47 2459 95 0 3 chr5 190487703 190488008 -9142142 - AluSx SINE Alu -8 304 1 228 192 0 58 chr5 190488483 190488535 -9141615 + L2 LINE L2 3189 3237 -35 511 259 53 0 chr5 190489517 190489648 -9140502 + L2 LINE L2 3175 3312 -1 2646 55 0 0 chr5 190490258 190490567 -9139583 + AluY SINE Alu 1 309 -2 635 251 114 0 chr5 190490777 190490952 -9139198 + MIR SINE MIR 52 246 -16 1294 231 34 12 chr5 190491514 190491835 -9138315 + MLT1I LTR MaLR 82 409 0 2241 78 51 7 chr5 190491965 190492261 -9137889 - AluSg1 SINE Alu 0 309 1 297 361 22 33 chr5 190492323 190492503 -9137647 + MER5B DNA MER1_type 1 178 0 252 0 0 0 chr5 190492884 190492912 -9137238 + (TA)n Simple_repeat Simple_repeat 2 29 0 2403 100 0 3 chr5 190492912 190493211 -9136939 - AluSc SINE Alu -11 298 1 377 347 155 5 chr5 190493710 190493929 -9136221 - MIR SINE MIR -6 256 5 * 464 279 142 16 chr5 190493925 190494108 -9136042 + MIR SINE MIR 5 210 -52 550 303 45 0 chr5 190494362 190494560 -9135590 + LTR67 LTR ERVL 341 547 -10 980 282 76 16 chr5 190495874 190496243 -9133907 + MLT1I LTR MaLR 18 408 -1 238 199 8 145 chr5 190496271 190496402 -9133748 + LTR67 LTR ERVL 23 135 -422 665 206 19 103 chr5 190496466 190496680 -9133470 + LTR67 LTR ERVL 353 548 -9 244 290 14 0 chr5 190496856 190496925 -9133225 + MIR SINE MIR 114 183 -79 269 351 99 20 chr5 190497223 190497374 -9132776 - MIR3 SINE MIR -6 202 40 279 297 236 16 chr5 190498627 190498809 -9131341 + MIR SINE MIR 24 245 -17 700 265 206 29 chr5 190498910 190499288 -9130862 - L2 LINE L2 0 3313 2869 287 296 13 124 chr5 190500013 190500246 -9129904 - L2 LINE L2 0 3313 3107 202 318 32 0 chr5 190500550 190500613 -9129537 - L2 LINE L2 -17 3255 3191 2492 83 0 0 chr5 190501384 190501685 -9128465 - AluSg SINE Alu -9 301 1 293 240 80 0 chr5 190502121 190502196 -9127954 + MIR SINE MIR 122 202 -60 352 361 41 27 chr5 190502311 190502530 -9127620 + MIR SINE MIR 20 241 -21 1710 173 23 20 chr5 190503328 190503629 -9126521 + AluJb SINE Alu 1 302 -10 576 265 48 0 chr5 190503825 190503972 -9126178 - MIR SINE MIR 0 262 109 259 339 173 12 chr5 190504422 190504595 -9125555 + MIR SINE MIR 14 209 -53 2213 131 0 0 chr5 190504655 190504952 -9125198 + AluSx SINE Alu 1 297 -15 308 333 150 45 chr5 190505036 190505262 -9124888 + L2 LINE L2 2970 3171 -101 5780 180 55 60 chr5 190505262 190505346 -9124804 + Charlie1a DNA MER1_type 2 85 -2676 2057 62 19 65 chr5 190505346 190505671 -9124479 + AluY SINE Alu 1 310 -1 5780 180 55 60 chr5 190505671 190505917 -9124233 + Charlie1a DNA MER1_type 85 331 -2430 1883 95 4 44 chr5 190505917 190506191 -9123959 - AluSx SINE Alu -12 300 38 5780 180 55 60 chr5 190506191 190506410 -9123740 + Charlie1a DNA MER1_type 331 549 -2212 327 25 0 0 chr5 190506410 190506450 -9123700 + (CA)n Simple_repeat Simple_repeat 1 40 0 5780 180 55 60 chr5 190506450 190507358 -9122792 + Charlie1a DNA MER1_type 549 1455 0 308 333 150 45 chr5 190507358 190507398 -9122752 + L2 LINE L2 3171 3264 -8 662 300 70 16 chr5 190508324 190508694 -9121456 - LTR16A LTR ERVL -6 444 55 200 200 0 0 chr5 190508902 190508942 -9121208 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 266 269 200 48 chr5 190508980 190509125 -9121025 + MIR SINE MIR 86 252 -10 1211 260 34 17 chr5 190509400 190509807 -9120343 - MER113 DNA MER1_type? -100 421 8 208 279 10 48 chr5 190509905 190510009 -9120141 + L2 LINE L2 2961 3060 -212 492 226 8 40 chr5 190510708 190510832 -9119318 + MIR SINE MIR 28 147 -115 391 271 128 10 chr5 190511038 190511173 -9118977 - MER5A DNA MER1_type -2 187 28 199 284 165 31 chr5 190511059 190511186 -9118964 + MER5A DNA MER1_type 35 178 -11 * 444 275 27 20 chr5 190511241 190511390 -9118760 + Charlie8 DNA MER1_type 109 258 -2159 194 321 36 0 chr5 190511454 190511510 -9118640 - MIR3 SINE MIR -53 155 98 245 250 108 88 chr5 190511692 190511863 -9118287 + MLT1K LTR MaLR 332 511 -77 765 165 52 77 chr5 190511863 190511979 -9118171 - MER53 DNA DNA 0 189 78 1906 151 3 39 chr5 190511979 190512291 -9117859 - AluSx SINE Alu -11 301 1 765 165 52 77 chr5 190512291 190512368 -9117782 - MER53 DNA DNA -111 78 1 245 250 108 88 chr5 190512368 190512436 -9117714 + MLT1K LTR MaLR 511 576 -12 337 294 18 9 chr5 190512459 190512568 -9117582 - MIR SINE MIR -82 126 17 232 236 18 0 chr5 190512736 190512791 -9117359 - L2 LINE L2 0 3313 3258 194 340 0 0 chr5 190512829 190512876 -9117274 - MIR3 SINE MIR -53 155 109 296 290 20 20 chr5 190513512 190513612 -9116538 + L2 LINE L2 2943 3042 -230 * 504 280 108 45 chr5 190513600 190513868 -9116282 - L2 LINE L2 -5 3308 3024 199 349 151 8 chr5 190513952 190514078 -9116072 + L2 LINE L2 3108 3251 -21 418 311 73 14 chr5 190514083 190514296 -9115854 - MIR SINE MIR -11 251 21 707 139 0 8 chr5 190514311 190514440 -9115710 - L1MB8 LINE L1 -7 6171 6044 753 252 22 115 chr5 190515393 190515897 -9114253 - LTR67 LTR ERVL -4 553 97 2211 101 3 3 chr5 190516369 190516657 -9113493 - AluSg SINE Alu -22 288 1 452 344 70 9 chr5 190516857 190517087 -9113063 + MIR SINE MIR 16 259 -3 256 297 136 39 chr5 190517133 190517288 -9112862 + MIR SINE MIR 74 243 -19 1203 294 9 0 chr5 190517528 190517861 -9112289 + MLT1I LTR MaLR 60 395 -14 228 254 49 49 chr5 190518091 190518233 -9111917 + MLT1L LTR MaLR 18 159 -456 520 137 60 43 chr5 190518233 190518350 -9111800 + MER5C DNA MER1_type 5 123 -201 487 223 39 0 chr5 190518492 190518622 -9111528 + MLT1L LTR MaLR 146 280 -335 24 32 0 0 chr5 190518625 190518656 -9111494 + AT_rich Low_complexity Low_complexity 1 31 0 1754 67 13 0 chr5 190518656 190518895 -9111255 - L1PB1 LINE L1 -35 6116 5875 302 26 0 0 chr5 190518952 190518990 -9111160 - L1PB1 LINE L1 -254 5897 5860 933 137 0 0 chr5 190518990 190519129 -9111021 + AluSg/x SINE Alu 172 310 -2 3575 101 23 14 chr5 190519138 190519711 -9110439 - L1PB1 LINE L1 -320 5831 5254 9684 144 44 21 chr5 190519726 190521580 -9108570 - L1PBa LINE L1 -2199 4663 2854 225 0 0 0 chr5 190521580 190521605 -9108545 + (TG)n Simple_repeat Simple_repeat 2 26 0 9684 144 44 21 chr5 190521605 190523542 -9106608 - L1PBa LINE L1 -4008 2854 634 1061 159 15 30 chr5 190523542 190523743 -9106407 - L1PBa LINE L1 -6663 200 3 232 192 19 0 chr5 190523858 190523910 -9106240 + MLT1L LTR MaLR 507 559 -56 242 224 0 0 chr5 190524052 190524101 -9106049 - L2 LINE L2 -5 3267 3219 884 251 169 39 chr5 190525059 190525545 -9104605 - MLT1H LTR MaLR 0 549 1 406 253 27 136 chr5 190525904 190526123 -9104027 - L1MC/D LINE L1 -535 5635 5653 2211 121 0 7 chr5 190526123 190526429 -9103721 + AluSx SINE Alu 1 304 -8 406 253 27 136 chr5 190526429 190526583 -9103567 - L1MC/D LINE L1 -516 5654 5485 307 310 25 110 chr5 190526626 190526907 -9103243 + L2 LINE L2 2923 3179 -93 272 377 0 0 chr5 190527668 190527745 -9102405 + L2 LINE L2 3101 3177 -95 840 262 31 91 chr5 190527746 190528132 -9102018 - MLT1K LTR MaLR -7 581 219 258 388 124 8 chr5 190528163 190528292 -9101858 + L2 LINE L2 3104 3247 -25 986 249 86 39 chr5 190528533 190528894 -9101256 + MLT1G1 LTR MaLR 16 393 -202 23 0 0 0 chr5 190528991 190529014 -9101136 + AT_rich Low_complexity Low_complexity 1 23 0 287 326 14 0 chr5 190529304 190529442 -9100708 - Charlie8 DNA MER1_type -2144 273 134 222 224 20 20 chr5 190530293 190530342 -9099808 - MIR SINE MIR -82 126 78 2542 56 10 0 chr5 190530526 190530828 -9099322 - AluY SINE Alu -6 305 1 373 319 22 0 chr5 190531075 190531213 -9098937 + MER5B DNA MER1_type 1 141 -37 263 251 139 84 chr5 190531271 190531314 -9098836 + L1MC4a LINE L1 5682 5721 -2087 2150 127 35 49 chr5 190531314 190531683 -9098467 - THE1B LTR MaLR 0 364 1 263 251 139 84 chr5 190531683 190531854 -9098296 + L1MC4a LINE L1 5721 5908 -1900 191 239 22 0 chr5 190532041 190532087 -9098063 + MER5B DNA MER1_type 131 177 -1 247 236 36 0 chr5 190532585 190532640 -9097510 - MIR SINE MIR -111 151 95 244 285 50 27 chr5 190532912 190533085 -9097065 + MIR SINE MIR 77 252 -10 424 171 12 37 chr5 190533144 190533226 -9096924 + L2 LINE L2 3234 3313 0 226 324 0 0 chr5 190533250 190533318 -9096832 + MIR SINE MIR 68 135 -73 328 151 132 0 chr5 190534452 190534558 -9095592 - MLT2E LTR ERVL -1 627 508 424 339 65 9 chr5 190534660 190534890 -9095260 - MLT2E LTR ERVL -383 245 3 257 79 0 0 chr5 190534942 190534980 -9095170 - L1P LINE L1 -856 5295 5258 * 3029 204 54 0 chr5 190534979 190535442 -9094708 + L1 LINE L1 3929 4442 -1704 450 0 0 0 chr5 190535442 190535492 -9094658 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 3029 204 54 0 chr5 190535492 190535713 -9094437 + L1 LINE L1 4442 4650 -1496 1816 146 68 4 chr5 190535713 190535994 -9094156 - AluJb SINE Alu -13 299 1 398 169 26 0 chr5 190535997 190536074 -9094076 - Charlie8 DNA MER1_type -2261 156 78 201 289 148 40 chr5 190536923 190537221 -9092929 - L2 LINE L2 -616 2698 2369 247 327 7 0 chr5 190537560 190537710 -9092440 + (TG)n Simple_repeat Simple_repeat 1 151 0 649 317 54 0 chr5 190537801 190538022 -9092128 + MIR SINE MIR 12 244 -18 335 237 81 81 chr5 190538142 190538191 -9091959 + L2 LINE L2 3127 3175 -138 1648 201 103 33 chr5 190538191 190538618 -9091532 - MSTB2 LTR MaLR 0 457 1 335 237 81 81 chr5 190538618 190538754 -9091396 + L2 LINE L2 3174 3312 -1 229 204 23 0 chr5 190538775 190538819 -9091331 + CT-rich Low_complexity Low_complexity 4 48 0 23 0 0 0 chr5 190540034 190540057 -9090093 + AT_rich Low_complexity Low_complexity 1 23 0 937 259 102 28 chr5 190540749 190541223 -9088927 - L2 LINE L2 -186 3127 2612 254 248 228 0 chr5 190543335 190543436 -9086714 - L2 LINE L2 0 3272 3149 230 254 0 0 chr5 190543436 190543491 -9086659 - Charlie8 DNA MER1_type -2 2415 2361 282 56 0 0 chr5 190543646 190543682 -9086468 + (TG)n Simple_repeat Simple_repeat 1 36 0 252 222 0 0 chr5 190543702 190543747 -9086403 - Charlie8 DNA MER1_type -2336 81 37 285 201 231 77 chr5 190543980 190544149 -9086001 + MLT1J LTR MaLR 72 266 -245 393 211 149 0 chr5 190544182 190544296 -9085854 + MIR SINE MIR 102 232 -30 247 237 103 32 chr5 190544889 190545045 -9085105 + LTR16B LTR ERVL 278 444 -20 609 308 116 17 chr5 190545476 190545898 -9084252 - MLT1L LTR MaLR -151 464 1 181 97 97 0 chr5 190546200 190546231 -9083919 + L3 LINE CR1 1523 1556 -21 264 328 33 25 chr5 190546254 190546376 -9083774 + MIR3 SINE MIR 38 160 -48 238 329 0 0 chr5 190546446 190546519 -9083631 + MER117 DNA MER1_type 101 173 -24 221 238 12 0 chr5 190546814 190546894 -9083256 + (TA)n Simple_repeat Simple_repeat 2 82 0 844 241 69 139 chr5 190546937 190547461 -9082689 - L2 LINE L2 0 3313 2827 1486 190 31 92 chr5 190547466 190547719 -9082431 - MLT1B LTR MaLR 0 390 170 881 152 0 0 chr5 190547719 190547851 -9082299 - FLAM_C SINE Alu -1 132 1 1486 190 31 92 chr5 190547851 190548012 -9082138 - MLT1B LTR MaLR -220 170 1 748 271 99 57 chr5 190548012 190548518 -9081632 - L2 LINE L2 -497 2817 2291 295 276 0 0 chr5 190548665 190548741 -9081409 - HsTC2 DNA Tc2 -1821 77 2 2657 106 17 128 chr5 190548749 190549289 -9080861 - LTR12 LTR ERV1 -234 480 1 300 224 137 12 chr5 190549290 190549389 -9080761 - MIR SINE MIR -64 144 37 189 111 28 28 chr5 190549407 190549443 -9080707 + MIR SINE MIR 195 230 -32 4334 139 40 47 chr5 190550194 190550401 -9079749 + L1MB3 LINE L1 5284 5491 -692 2201 75 0 96 chr5 190550401 190550754 -9079396 + AluY SINE Alu 1 311 0 4334 139 40 47 chr5 190550754 190551442 -9078708 + L1MB3 LINE L1 5491 6173 -10 200 284 136 0 chr5 190551453 190551534 -9078616 + L2 LINE L2 3217 3308 -5 217 116 47 0 chr5 190551623 190551666 -9078484 + (CAAA)n Simple_repeat Simple_repeat 4 48 0 1376 123 0 0 chr5 190551900 190552079 -9078071 - AluSx SINE Alu -131 181 3 2341 108 10 0 chr5 190552855 190553162 -9076988 - AluSx SINE Alu -2 310 1 244 250 0 0 chr5 190553535 190553587 -9076563 + LTR30 LTR ERV1 1 52 -670 2070 157 32 70 chr5 190553587 190554110 -9076040 + LTR12 LTR ERV1 55 2219 -219 2577 53 7 0 chr5 190554298 190554598 -9075552 + AluY SINE Alu 1 302 -9 1799 159 17 82 chr5 190554933 190555092 -9075058 + MLT1B LTR MaLR 2 170 -220 1911 158 0 20 chr5 190555092 190555396 -9074754 - AluJo SINE Alu -14 298 1 1799 159 17 82 chr5 190555396 190555650 -9074500 + MLT1B LTR MaLR 170 388 -2 254 310 193 42 chr5 190555725 190556120 -9074030 + L2 LINE L2 2766 3230 -83 319 206 0 0 chr5 190556124 190556187 -9073963 - MLT1D LTR MaLR -7 619 557 2166 111 10 7 chr5 190556209 190556498 -9073652 - AluSp SINE Alu -19 294 5 1407 192 167 20 chr5 190556504 190556899 -9073251 - MLT1D LTR MaLR -52 453 1 191 313 60 0 chr5 190556899 190556982 -9073168 + L2 LINE L2 3225 3312 -1 660 309 37 9 chr5 190556989 190557206 -9072944 - MIR SINE MIR -12 250 28 2393 104 0 0 chr5 190557350 190557657 -9072493 + AluSq SINE Alu 1 307 -6 271 250 76 11 chr5 190557779 190557871 -9072279 + MER5A DNA MER1_type 7 104 -85 225 135 0 73 chr5 190559696 190559792 -9070358 + (CACCC)n Simple_repeat Simple_repeat 5 93 0 454 284 168 0 chr5 190560043 190560198 -9069952 + MER5A DNA MER1_type 9 189 0 792 241 52 8 chr5 190560461 190560710 -9069440 - MER102a DNA MER1_type -10 320 61 2281 109 3 6 chr5 190560721 190561034 -9069116 + AluSx SINE Alu 1 312 0 360 257 9 71 chr5 190561062 190561175 -9068975 - L2 LINE L2 -31 3241 3136 278 316 50 63 chr5 190561159 190561683 -9068467 - L2 LINE L2 -277 2995 2487 * 354 210 60 10 chr5 190562011 190562111 -9068039 + MIR SINE MIR 133 237 -25 222 263 0 26 chr5 190562135 190562211 -9067939 + (TTA)n Simple_repeat Simple_repeat 1 74 0 701 245 73 39 chr5 190562307 190562540 -9067610 + MIR SINE MIR 2 242 -20 1310 227 143 21 chr5 190562709 190563136 -9067014 + MLT1D LTR MaLR 27 505 0 374 298 42 39 chr5 190563185 190563357 -9066793 - MIR3 SINE MIR -62 146 1 2221 120 7 0 chr5 190563580 190563889 -9066261 - AluSp SINE Alu -2 311 1 290 286 199 31 chr5 190564191 190564387 -9065763 - MIR SINE MIR -12 250 22 463 272 38 6 chr5 190564407 190564565 -9065585 - MER5B DNA MER1_type -3 175 13 343 200 95 11 chr5 190564833 190564928 -9065222 - MIR SINE MIR -62 146 44 323 337 25 40 chr5 190565411 190565613 -9064537 - MIR SINE MIR -7 255 57 220 353 49 10 chr5 190565801 190565903 -9064247 - MIR3 SINE MIR 0 208 103 243 125 0 0 chr5 190565975 190566015 -9064135 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 375 256 30 77 chr5 190566040 190566208 -9063942 - MIR SINE MIR -56 206 47 692 296 93 29 chr5 190566774 190567152 -9062998 - MER113 DNA MER1_type? -54 467 66 195 326 86 67 chr5 190567586 190567853 -9062297 + L2 LINE L2 2992 3263 -9 585 329 52 4 chr5 190567868 190568099 -9062051 - MIR SINE MIR -2 260 19 285 51 0 0 chr5 190568127 190568166 -9061984 + (CA)n Simple_repeat Simple_repeat 1 39 0 183 80 0 0 chr5 190568165 190568190 -9061960 + (CG)n Simple_repeat Simple_repeat 1 25 0 * 2518 71 3 6 chr5 190568838 190569149 -9061001 + AluY SINE Alu 2 311 0 314 331 96 11 chr5 190569201 190569379 -9060771 - MIR SINE MIR 0 262 70 1091 182 0 0 chr5 190569490 190569677 -9060473 - MER5A DNA MER1_type 0 189 3 200 304 0 13 chr5 190569723 190569740 -9060410 - MIR SINE MIR -61 147 131 2593 46 7 3 chr5 190569740 190570043 -9060107 - AluY SINE Alu -7 304 1 200 304 0 13 chr5 190570043 190570108 -9060042 - MIR SINE MIR -77 131 87 286 315 63 16 chr5 190570762 190570889 -9059261 - MIR SINE MIR -97 165 33 260 206 0 27 chr5 190570933 190571006 -9059144 + MER103 DNA DNA 82 152 -14 247 245 75 19 chr5 190571220 190571326 -9058824 + MIR SINE MIR 22 133 -75 561 285 35 0 chr5 190571488 190571688 -9058462 - MER3 DNA MER1_type 0 209 3 684 194 65 0 chr5 190571858 190571997 -9058153 - FRAM SINE Alu -16 150 3 296 323 10 0 chr5 190572473 190572569 -9057581 + MIR SINE MIR 50 146 -116 1480 206 49 11 chr5 190573141 190573491 -9056659 - L1MC2 LINE L1 0 6344 5982 272 286 9 38 chr5 190573560 190573665 -9056485 + L2 LINE L2 3134 3235 -37 252 86 0 0 chr5 190573680 190573715 -9056435 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 207 0 0 0 chr5 190574178 190574201 -9055949 + (T)n Simple_repeat Simple_repeat 1 23 0 328 212 0 0 chr5 190575105 190575171 -9054979 - MLT1B LTR MaLR -83 307 242 1510 195 58 25 chr5 190575391 190575750 -9054400 - MLT1A2 LTR MaLR 0 374 4 625 248 131 5 chr5 190576187 190576393 -9053757 + MIR SINE MIR 7 238 -24 303 301 54 37 chr5 190576814 190577037 -9053113 + L1ME3A LINE L1 5719 5946 -224 35 0 0 22 chr5 190577424 190577450 -9052700 + AT_rich Low_complexity Low_complexity 1 27 -18 2271 102 3 3 chr5 190577450 190577745 -9052405 + AluSx SINE Alu 1 295 -17 35 0 0 22 chr5 190577745 190577764 -9052386 + AT_rich Low_complexity Low_complexity 27 45 0 338 297 41 62 chr5 190578218 190578413 -9051737 + L2 LINE L2 3004 3194 -78 475 290 8 0 chr5 190578450 190578574 -9051576 + L2 LINE L2 3189 3313 0 462 330 17 6 chr5 190578605 190578781 -9051369 + MIR SINE MIR 64 241 -21 242 236 0 14 chr5 190579260 190579332 -9050818 + MIR SINE MIR 67 137 -71 2233 112 6 16 chr5 190579341 190579655 -9050495 - AluSx SINE Alu -1 311 1 27 29 0 0 chr5 190579771 190579805 -9050345 + AT_rich Low_complexity Low_complexity 1 34 0 437 301 29 65 chr5 190580213 190580459 -9049691 + L2 LINE L2 3073 3309 -4 728 184 19 0 chr5 190580460 190580728 -9049422 + (TGGA)n Simple_repeat Simple_repeat 1 273 0 265 285 131 31 chr5 190581043 190581173 -9048977 - L2 LINE L2 -2 3270 3128 266 252 0 18 chr5 190632494 190632605 -8997545 + AluSg/x SINE Alu 176 284 -18 184 325 125 12 chr5 190633018 190633098 -8997052 + L2 LINE L2 3179 3267 -5 290 315 185 22 chr5 190634002 190634186 -8995964 + MIR SINE MIR 21 234 -28 793 234 83 91 chr5 190634361 190634843 -8995307 - MLT1J LTR MaLR 0 511 34 1467 231 59 24 chr5 190635463 190635976 -8994174 - MLT1F1 LTR MaLR 0 567 36 272 322 69 30 chr5 190636026 190636228 -8993922 + L2 LINE L2 2843 3052 -220 265 288 15 0 chr5 190637445 190637511 -8992639 - L2 LINE L2 -3 3269 3203 1970 133 22 0 chr5 190637554 190637832 -8992318 + AluSx SINE Alu 28 311 -1 2246 99 3 3 chr5 190638583 190638875 -8991275 + AluSg SINE Alu 1 292 -18 2159 180 84 2 chr5 190638879 190639345 -8990805 - L1MB3 LINE L1 0 6183 5680 282 339 62 8 chr5 190639412 190639542 -8990608 + L2 LINE L2 3159 3295 -18 2092 151 0 0 chr5 190639542 190639841 -8990309 - AluSx SINE Alu -13 299 1 258 242 0 0 chr5 190640536 190640602 -8989548 + (TG)n Simple_repeat Simple_repeat 1 66 0 258 200 0 0 chr5 190640640 190640651 -8989499 + (TG)n Simple_repeat Simple_repeat 2 12 -49 2213 101 3 7 chr5 190640651 190640940 -8989210 + AluSp SINE Alu 1 290 -23 225 65 0 0 chr5 190640940 190640971 -8989179 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 258 200 0 0 chr5 190640978 190641026 -8989124 + (TG)n Simple_repeat Simple_repeat 11 61 0 379 337 29 23 chr5 190641028 190641200 -8988950 + MIR SINE MIR 78 250 -12 465 281 115 26 chr5 190641404 190641596 -8988554 - MIR SINE MIR -52 210 2 1296 144 30 117 chr5 190642652 190642986 -8987164 + AluYb8 SINE Alu 1 305 -13 210 216 40 0 chr5 190644012 190644086 -8986064 + (CTATA)n Simple_repeat Simple_repeat 2 78 0 327 274 0 0 chr5 190644191 190644264 -8985886 + MIR SINE MIR 119 191 -71 368 325 7 53 chr5 190644550 190644701 -8985449 - MIR3 SINE MIR -1 207 64 200 311 78 100 chr5 190644961 190645321 -8984829 + L2 LINE L2 2921 3272 0 217 158 26 0 chr5 190645522 190645560 -8984590 - MIR SINE MIR -75 133 95 213 271 28 111 chr5 190646345 190646385 -8983765 - L2 LINE L2 -587 2727 2685 2329 109 0 0 chr5 190646385 190646696 -8983454 + AluSx SINE Alu 1 311 -1 213 271 28 111 chr5 190646696 190646799 -8983351 - L2 LINE L2 -629 2685 2596 623 355 33 12 chr5 190647056 190647301 -8982849 + MIR SINE MIR 12 261 -1 1834 172 3 3 chr5 190647680 190647983 -8982167 + AluJo SINE Alu 1 303 -9 2456 127 32 114 chr5 190647988 190648000 -8982150 + L1MB2 LINE L1 5634 5645 -526 1706 153 43 55 chr5 190648000 190648136 -8982014 + MER2 DNA MER2_type 2 138 -206 1980 129 19 42 chr5 190648136 190648446 -8981704 - AluSx SINE Alu -9 303 1 1706 153 43 55 chr5 190648446 190648656 -8981494 + MER2 DNA MER2_type 138 344 0 2456 127 32 114 chr5 190648656 190649228 -8980922 + L1MB2 LINE L1 5645 6170 -1 282 318 82 0 chr5 190649283 190649393 -8980757 + MIR SINE MIR 134 252 -10 2829 277 72 23 chr5 190649525 190650856 -8979294 + L2 LINE L2 1920 3309 -4 255 170 0 0 chr5 190651476 190651523 -8978627 + (CA)n Simple_repeat Simple_repeat 2 48 0 22 35 0 0 chr5 190652713 190652742 -8977408 + GC_rich Low_complexity Low_complexity 1 29 0 2052 142 0 29 chr5 190652875 190653191 -8976959 + AluJb SINE Alu 1 307 -5 370 140 37 4 chr5 190653728 190653833 -8976317 + MER53 DNA DNA 38 189 0 1132 159 14 32 chr5 190654304 190654524 -8975626 - MER20 DNA MER1_type -3 216 1 4237 99 14 87 chr5 190654551 190655267 -8974883 + MER4A LTR ERV1 1 664 0 1539 158 77 7 chr5 190655353 190655625 -8974525 + AluJb SINE Alu 1 291 -21 656 287 81 30 chr5 190655631 190656000 -8974150 - L1MC4a LINE L1 -1888 5920 5533 731 299 15 19 chr5 190656008 190656178 -8973972 - MIR SINE MIR 0 262 92 2427 89 0 0 chr5 190656178 190656481 -8973669 + AluY SINE Alu 1 303 -8 731 299 15 19 chr5 190656481 190656571 -8973579 - MIR SINE MIR -170 92 3 406 296 160 8 chr5 190656571 190656730 -8973420 - MIR SINE MIR -75 133 2 310 315 19 9 chr5 190656867 190656975 -8973175 + MIR SINE MIR 25 133 -129 652 265 47 17 chr5 190657072 190657306 -8972844 - LTR16C LTR ERVL 0 491 251 250 250 18 0 chr5 190657651 190657707 -8972443 - L2 LINE L2 -1 3312 3256 2586 57 3 0 chr5 190657722 190658023 -8972127 + AluY SINE Alu 1 302 -9 1222 186 114 37 chr5 190658023 190658373 -8971777 - L1MC2 LINE L1 -11 6333 5957 610 257 128 18 chr5 190658373 190658591 -8971559 - L2 LINE L2 -61 3252 3011 1852 166 49 39 chr5 190658721 190658814 -8971336 + MLT1B LTR MaLR 1 92 -298 2038 130 3 23 chr5 190658814 190659114 -8971036 - AluSx SINE Alu -16 296 3 1852 166 49 39 chr5 190659114 190659406 -8970744 + MLT1B LTR MaLR 92 390 0 444 316 34 34 chr5 190659640 190659849 -8970301 + MIR SINE MIR 25 233 -29 293 221 13 39 chr5 190660238 190660315 -8969835 + MIR3 SINE MIR 106 180 -28 613 323 13 25 chr5 190660380 190660615 -8969535 - MIR SINE MIR -11 251 20 201 132 0 0 chr5 190660864 190660902 -8969248 + (CA)n Simple_repeat Simple_repeat 2 39 0 2129 135 0 0 chr5 190660956 190661252 -8968898 + AluJb SINE Alu 6 301 -11 324 254 118 18 chr5 190661577 190661687 -8968463 + MIR3 SINE MIR 46 166 -42 580 290 36 48 chr5 190661788 190662045 -8968105 - MIR SINE MIR 0 262 12 444 186 0 101 chr5 190663044 190663173 -8966977 - MIR SINE MIR -81 181 66 182 293 182 20 chr5 190663188 190663287 -8966863 + MIR SINE MIR 119 233 -29 294 125 0 0 chr5 190663291 190663339 -8966811 + (TTCCC)n Simple_repeat Simple_repeat 5 52 0 227 256 110 24 chr5 190663361 190663443 -8966707 - L2 LINE L2 -16 3297 3209 267 339 175 23 chr5 190663777 190664125 -8966025 - L3 LINE CR1 -155 1422 1022 356 281 125 12 chr5 190664241 190664401 -8965749 - MIR SINE MIR -7 255 78 197 311 25 59 chr5 190664594 190664713 -8965437 - L3 LINE CR1 -909 668 554 213 377 88 15 chr5 190666064 190666406 -8963744 - L2 LINE L2 -460 2854 2488 1315 173 53 60 chr5 190666497 190666781 -8963369 + AluJb SINE Alu 12 293 -19 421 234 177 14 chr5 190666975 190667184 -8962966 - MLT1L LTR MaLR -3 612 370 2329 105 0 0 chr5 190667834 190668130 -8962020 - AluSp SINE Alu -17 296 1 223 211 13 26 chr5 190668921 190668997 -8961153 + (TATATG)n Simple_repeat Simple_repeat 6 80 0 308 330 118 5 chr5 190669218 190669421 -8960729 + MIR SINE MIR 37 262 0 214 384 0 0 chr5 190669415 190669488 -8960662 - L2 LINE L2 0 3272 3200 * 372 222 56 44 chr5 190669497 190669587 -8960563 - L2 LINE L2 0 3272 3182 587 226 0 29 chr5 190669678 190669815 -8960335 - MIR SINE MIR -110 152 20 207 69 0 0 chr5 190670009 190670038 -8960112 + (TG)n Simple_repeat Simple_repeat 2 30 0 188 211 13 0 chr5 190670139 190670215 -8959935 + (TG)n Simple_repeat Simple_repeat 2 78 0 256 280 0 0 chr5 190670249 190670342 -8959808 + (TG)n Simple_repeat Simple_repeat 1 93 0 272 326 136 8 chr5 190670458 190670590 -8959560 - L3 LINE CR1 -1189 388 240 2491 44 7 7 chr5 190670641 190670937 -8959213 + AluY SINE Alu 11 306 -5 373 215 62 39 chr5 190670999 190671129 -8959021 + MIR SINE MIR 19 151 -57 301 345 21 35 chr5 190671205 190671350 -8958800 + MIR3 SINE MIR 3 145 -63 219 212 307 36 chr5 190671818 190671955 -8958195 + L2 LINE L2 2932 3105 -167 703 261 5 27 chr5 190672424 190672608 -8957542 + MIR SINE MIR 13 192 -70 1163 201 42 0 chr5 190672961 190673175 -8956975 + MER58A DNA MER1_type 1 223 -1 276 322 122 39 chr5 190673549 190673754 -8956396 + L2 LINE L2 2631 2852 -462 264 392 29 23 chr5 190673832 190674003 -8956147 + L2 LINE L2 2926 3097 -175 863 219 36 10 chr5 190674131 190674198 -8955952 + MIR SINE MIR 7 71 -191 562 61 0 37 chr5 190674198 190674280 -8955870 - MADE1 DNA Mariner -1 79 1 863 219 36 10 chr5 190674280 190674404 -8955746 + MIR SINE MIR 71 203 -59 230 291 39 10 chr5 190674455 190674558 -8955592 - L1MC4 LINE L1 -1341 6701 6596 187 146 0 42 chr5 190674601 190674649 -8955501 + (TG)n Simple_repeat Simple_repeat 1 46 0 * 620 98 53 0 chr5 190674648 190674781 -8955369 + GA-rich Low_complexity Low_complexity 1 140 0 373 259 196 0 chr5 190674889 190675001 -8955149 + L2 LINE L2 3137 3270 -2 239 300 90 0 chr5 190675563 190675663 -8954487 - L2 LINE L2 -18 3254 3146 606 306 102 15 chr5 190675700 190675906 -8954244 - MIR SINE MIR -6 256 33 456 154 123 69 chr5 190676083 190676213 -8953937 + MIR3 SINE MIR 10 146 -62 580 290 34 24 chr5 190676640 190676847 -8953303 - MIR SINE MIR -2 260 52 1949 141 6 52 chr5 190676944 190677270 -8952880 + AluJo SINE Alu 1 311 -1 293 337 153 34 chr5 190677295 190677507 -8952643 - L2 LINE L2 -3 3310 3125 2559 67 0 6 chr5 190677507 190677819 -8952331 + AluY SINE Alu 1 310 -1 293 337 153 34 chr5 190677819 190677887 -8952263 - L2 LINE L2 -188 3125 3067 1240 171 19 9 chr5 190677887 190678103 -8952047 - MER20 DNA MER1_type -1 218 1 293 337 153 34 chr5 190678103 190678239 -8951911 - L2 LINE L2 -246 3067 2843 223 261 14 43 chr5 190678278 190678347 -8951803 - L2 LINE L2 -8 3305 3239 436 221 44 35 chr5 190679250 190679363 -8950787 + MER81 DNA DNA 1 114 0 224 170 43 0 chr5 190679467 190679514 -8950636 - L2 LINE L2 0 3272 3224 1876 170 25 22 chr5 190680074 190680438 -8949712 + MLT1A1 LTR MaLR 1 365 0 1312 219 28 72 chr5 190680685 190681142 -8949008 - MER113 DNA MER1_type? -77 444 8 658 245 130 23 chr5 190681586 190681802 -8948348 - MIR SINE MIR -2 260 22 258 128 0 0 chr5 190681908 190681947 -8948203 - L2 LINE L2 -3 3310 3272 270 291 99 64 chr5 190682139 190682280 -8947870 + MIR SINE MIR 47 192 -70 2506 155 19 16 chr5 190682510 190682942 -8947208 - Tigger2a DNA MER2_type -1 433 1 382 287 203 66 chr5 190682954 190683481 -8946669 + L2 LINE L2 2730 3313 0 519 260 28 87 chr5 190683564 190683612 -8946538 - L1ME LINE L1 -299 5822 5773 2097 116 65 0 chr5 190683612 190683905 -8946245 - AluSx SINE Alu 0 312 1 519 260 28 87 chr5 190683905 190684144 -8946006 - L1ME LINE L1 -348 5773 5552 603 346 48 4 chr5 190684827 190685058 -8945092 + MIR SINE MIR 9 249 -13 1986 150 3 3 chr5 190685066 190685373 -8944777 + AluSx SINE Alu 1 307 -5 361 259 109 34 chr5 190685731 190685878 -8944272 - MIR SINE MIR -32 230 73 23 0 0 0 chr5 190685924 190685947 -8944203 + AT_rich Low_complexity Low_complexity 1 23 0 256 187 200 0 chr5 190686495 190686570 -8943580 + MIR SINE MIR 86 175 -87 431 154 51 3 chr5 190686577 190686715 -8943435 - MER53 DNA DNA 0 189 2 368 226 137 24 chr5 190687242 190687366 -8942784 + L2 LINE L2 3138 3275 -38 1672 203 0 3 chr5 190687435 190687918 -8942232 + AluJo SINE Alu 6 312 0 234 128 0 0 chr5 190688793 190688832 -8941318 + (CA)n Simple_repeat Simple_repeat 1 39 0 1978 87 13 26 chr5 190689055 190689365 -8940785 + L1MA5A LINE L1 5992 6297 0 311 291 71 16 chr5 190689385 190689567 -8940583 + MLT1J LTR MaLR 320 511 0 656 262 46 46 chr5 190689589 190689826 -8940324 + L2 LINE L2 3077 3313 0 322 375 51 28 chr5 190689988 190690164 -8939986 - L2 LINE L2 -13 3259 3080 341 336 46 76 chr5 190690180 190690442 -8939708 + L2 LINE L2 2987 3240 -32 212 298 32 48 chr5 190690755 190690943 -8939207 + L2 LINE L2 2852 3036 -236 509 281 73 0 chr5 190691235 190691427 -8938723 + MLT1K LTR MaLR 41 246 -342 386 319 115 13 chr5 190691687 190691844 -8938306 + MIR3 SINE MIR 8 180 -28 744 249 158 78 chr5 190692023 190692082 -8938068 - MLT1K LTR MaLR -2 586 533 2190 117 0 25 chr5 190692082 190692398 -8937752 + AluSg SINE Alu 3 310 0 744 249 158 78 chr5 190692398 190692875 -8937275 - MLT1K LTR MaLR -55 533 7 190 288 128 82 chr5 190693519 190693957 -8936193 - L2 LINE L2 -2 3270 2813 576 234 72 12 chr5 190694647 190694814 -8935336 - MER115 DNA AcHobo -48 645 469 889 308 81 3 chr5 190694869 190695203 -8934947 - MER115 DNA AcHobo -327 366 7 246 95 0 0 chr5 190695240 190695282 -8934868 + (TTAA)n Simple_repeat Simple_repeat 3 44 0 1845 141 7 24 chr5 190695282 190695572 -8934578 - AluSx SINE Alu -26 286 2 2114 119 0 42 chr5 190696246 190696558 -8933592 - AluSc SINE Alu -10 299 1 1160 272 62 11 chr5 190696719 190697087 -8933063 - L2 LINE L2 0 3313 2927 1459 165 129 11 chr5 190697121 190697400 -8932750 + AluJo SINE Alu 1 312 0 376 247 76 51 chr5 190697562 190697720 -8932430 - MIR SINE MIR -95 167 6 201 237 17 34 chr5 190698236 190698295 -8931855 - L2 LINE L2 -5 3308 3251 380 267 186 76 chr5 190698761 190698890 -8931260 - HAL1 LINE L1 -1414 1093 980 2441 87 6 6 chr5 190698890 190699201 -8930949 - AluSx SINE Alu -1 311 1 380 267 186 76 chr5 190699201 190699690 -8930460 - HAL1 LINE L1 -1527 980 407 804 204 3 10 chr5 190699723 190700463 -8929687 + (TGG)n Simple_repeat Simple_repeat 1 734 0 878 188 0 4 chr5 190700487 190700721 -8929429 + (TGG)n Simple_repeat Simple_repeat 1 233 0 2852 126 12 16 chr5 190700723 190701153 -8928997 + MSTA LTR MaLR 1 428 0 5846 110 20 9 chr5 190701350 190703228 -8926922 + L1PA16 LINE L1 4281 6166 0 315 0 0 0 chr5 190703553 190703588 -8926562 + (TG)n Simple_repeat Simple_repeat 2 36 0 1778 148 14 77 chr5 190703703 190704069 -8926081 + MLT1B LTR MaLR 1 343 -47 438 20 0 0 chr5 190704080 190704131 -8926019 + (CA)n Simple_repeat Simple_repeat 1 51 0 297 294 48 24 chr5 190704169 190704295 -8925855 - HAL1 LINE L1 -2377 130 2 733 260 35 31 chr5 190705426 190705653 -8924497 + MIR SINE MIR 21 248 -14 677 262 113 11 chr5 190705951 190706226 -8923924 - L1ME4a LINE L1 -218 5903 5601 250 187 99 44 chr5 190706268 190706359 -8923791 - L1ME4a LINE L1 -619 5502 5407 2348 100 0 0 chr5 190707984 190708284 -8921866 + AluSc SINE Alu 1 300 -9 535 325 98 0 chr5 190708287 190708481 -8921669 + MIR SINE MIR 28 240 -22 229 269 0 0 chr5 190708531 190708598 -8921552 + MLT1L LTR MaLR 1 67 -548 391 261 58 106 chr5 190708667 190708747 -8921403 + MLT1L LTR MaLR 202 284 -331 1138 162 199 46 chr5 190708747 190709118 -8921032 - MSTC LTR MaLR 0 428 1 391 261 58 106 chr5 190709118 190709263 -8920887 + MLT1L LTR MaLR 284 416 -199 287 336 35 0 chr5 190709859 190709972 -8920178 + L2 LINE L2 3197 3313 0 335 338 37 60 chr5 190710045 190710261 -8919889 + MIR SINE MIR 4 214 -48 1041 146 12 0 chr5 190710316 190710480 -8919670 - MER5A DNA MER1_type -23 166 1 282 29 0 0 chr5 190710563 190710598 -8919552 + (CA)n Simple_repeat Simple_repeat 2 36 0 812 201 154 37 chr5 190710985 190711184 -8918966 + MER33 DNA MER1_type 2 243 -2342 2308 97 0 0 chr5 190711184 190711472 -8918678 - AluSg SINE Alu -3 307 20 812 201 154 37 chr5 190711472 190711545 -8918605 + MER33 DNA MER1_type 243 306 -18 216 122 0 0 chr5 190711620 190711661 -8918489 + (TG)n Simple_repeat Simple_repeat 1 41 0 452 250 257 0 chr5 190711884 190712028 -8918122 + MIR SINE MIR 2 182 -80 310 105 4 21 chr5 190712057 190712104 -8918046 - MADE1 DNA Mariner -3 77 73 2555 68 7 0 chr5 190712104 190712413 -8917737 + AluY SINE Alu 1 311 0 310 105 4 21 chr5 190712413 190712485 -8917665 - MADE1 DNA Mariner -7 73 1 1204 222 43 5 chr5 190712485 190712791 -8917359 - MLT1A1 LTR MaLR -42 348 2 414 283 0 3 chr5 190713785 190713902 -8916248 - MIR SINE MIR -41 167 53 327 256 18 89 chr5 190714214 190714382 -8915768 + MIR3 SINE MIR 38 193 -15 343 317 29 0 chr5 190714909 190715013 -8915137 - MIR SINE MIR -84 178 72 25 65 0 0 chr5 190715134 190715180 -8914970 + AT_rich Low_complexity Low_complexity 1 46 0 1255 204 18 0 chr5 190715869 190716089 -8914061 + MER58A DNA MER1_type 1 224 0 457 267 0 25 chr5 190716110 190716230 -8913920 + MIR SINE MIR 53 169 -93 548 299 31 63 chr5 190716302 190716556 -8913594 + MLT1I LTR MaLR 99 344 -65 300 239 9 64 chr5 190716591 190716700 -8913450 + MIR SINE MIR 158 260 -2 264 292 73 10 chr5 190716785 190716881 -8913269 - L2 LINE L2 -1 3271 3170 333 331 12 25 chr5 190716936 190717096 -8913054 - L2 LINE L2 -244 3028 2871 227 269 0 0 chr5 190717342 190717394 -8912756 + MLT1L LTR MaLR 343 394 -221 334 258 11 34 chr5 190717659 190717748 -8912402 - MIR SINE MIR -121 141 55 727 234 159 31 chr5 190718496 190718723 -8911427 + MIR SINE MIR 7 262 0 213 196 0 0 chr5 190719285 190719331 -8910819 + (TG)n Simple_repeat Simple_repeat 2 47 0 572 303 96 23 chr5 190719422 190719640 -8910510 - MIR SINE MIR -11 251 18 381 240 21 21 chr5 190719696 190719792 -8910358 - MER5A DNA MER1_type -85 104 9 365 241 93 9 chr5 190719911 190720019 -8910131 + MIR SINE MIR 38 154 -108 980 273 88 40 chr5 190720630 190721085 -8909065 + MLT1H LTR MaLR 73 549 0 860 238 32 11 chr5 190721170 190721355 -8908795 + MER5A DNA MER1_type 1 189 0 417 299 84 19 chr5 190721363 190721517 -8908633 + MER5B DNA MER1_type 1 164 -14 473 236 230 0 chr5 190721566 190721714 -8908436 - MER5A DNA MER1_type -2 187 6 318 353 67 33 chr5 190721884 190722034 -8908116 - L2 LINE L2 -219 3053 2899 191 333 29 39 chr5 190722083 190722185 -8907965 - L2 LINE L2 -495 2819 2719 295 308 105 15 chr5 190724855 190724988 -8905162 + L2 LINE L2 2566 2710 -604 356 210 25 0 chr5 190724990 190725071 -8905079 + MLT1K LTR MaLR 154 236 -352 359 316 0 0 chr5 190725076 190725193 -8904957 - MIR SINE MIR 0 262 146 2327 68 3 10 chr5 190726098 190726405 -8903745 - AluY SINE Alu -6 305 1 1990 120 57 27 chr5 190726463 190726796 -8903354 + THE1B LTR MaLR 1 343 -21 1302 160 4 23 chr5 190726865 190727127 -8903023 + L1MB3 LINE L1 5925 6181 -2 371 273 38 82 chr5 190727147 190727173 -8902977 - L1ME4a LINE L1 -4 6117 6091 1251 174 89 51 chr5 190727173 190727466 -8902684 + AluJo SINE Alu 1 304 -8 371 273 38 82 chr5 190727466 190727622 -8902528 - L1ME4a LINE L1 -30 6091 5943 2168 100 0 0 chr5 190727703 190727993 -8902157 + AluSg1 SINE Alu 5 294 -15 304 258 258 0 chr5 190728875 190728968 -8901182 - MIR3 SINE MIR -48 160 44 472 296 58 38 chr5 190728996 190729287 -8900863 - L2 LINE L2 0 3313 3017 197 298 57 71 chr5 190729715 190729856 -8900294 + MIR SINE MIR 13 153 -55 396 154 87 90 chr5 190729867 190730015 -8900135 - MIR SINE MIR -44 218 78 1904 237 22 44 chr5 190730488 190730991 -8899159 - MER115 DNA AcHobo -25 668 177 2390 119 53 58 chr5 190731080 190731173 -8898977 - Tigger2a DNA MER2_type -2275 433 341 1481 161 7 29 chr5 190731173 190731447 -8898703 + AluJb SINE Alu 44 311 -1 2390 119 53 58 chr5 190731447 190731788 -8898362 - Tigger2a DNA MER2_type -2367 341 1 22 0 0 0 chr5 190731804 190731826 -8898324 + AT_rich Low_complexity Low_complexity 1 22 0 1061 144 17 6 chr5 190731826 190732006 -8898144 + AluJb SINE Alu 2 183 -129 766 95 0 115 chr5 190732106 190732254 -8897896 - Tigger2a DNA MER2_type -303 131 1 22 0 0 0 chr5 190732270 190732292 -8897858 + AT_rich Low_complexity Low_complexity 1 22 0 1899 132 3 16 chr5 190732292 190732596 -8897554 + AluSx SINE Alu 2 301 -11 484 107 36 12 chr5 190732597 190732681 -8897469 - Charlie5 DNA MER1_type -73 2539 2454 1788 141 13 23 chr5 190732733 190732870 -8897280 + AluSx SINE Alu 1 138 -174 2196 86 3 0 chr5 190732870 190733162 -8896988 + AluSp SINE Alu 1 293 -20 1788 141 13 23 chr5 190733162 190733329 -8896821 + AluSx SINE Alu 138 302 -10 834 192 48 0 chr5 190733330 190733497 -8896653 - L1MB7 LINE L1 -38 6146 5972 576 240 15 0 chr5 190733500 190733643 -8896507 - MER33 DNA MER1_type -250 74 1 238 290 0 0 chr5 190734684 190734746 -8895404 - MLT1L LTR MaLR -3 612 551 831 219 6 44 chr5 190734749 190734767 -8895383 + MER5A DNA MER1_type 8 25 -164 1663 155 10 34 chr5 190734767 190735081 -8895069 + AluJo SINE Alu 2 308 0 831 219 6 44 chr5 190735081 190735244 -8894906 + MER5A DNA MER1_type 25 183 -6 698 296 71 66 chr5 190735321 190735744 -8894406 - MLT1L LTR MaLR -190 425 1 272 252 213 11 chr5 190735744 190735864 -8894286 - MIR SINE MIR -62 146 16 651 301 31 74 chr5 190735994 190736319 -8893831 + MER102a DNA MER1_type 2 312 -18 2342 158 46 10 chr5 190736880 190737128 -8893022 - MSTB LTR MaLR 0 426 156 1489 177 17 7 chr5 190737128 190737416 -8892734 + AluJb SINE Alu 16 306 -6 2342 158 46 10 chr5 190737416 190737578 -8892572 - MSTB LTR MaLR -270 156 1 426 300 207 5 chr5 190737860 190738170 -8891980 - L2 LINE L2 -182 3090 2712 355 341 194 0 chr5 190738248 190738547 -8891603 + L2 LINE L2 2383 2739 -575 240 239 109 11 chr5 190738576 190738668 -8891482 - LTR67 LTR ERVL 0 557 457 1068 293 159 11 chr5 190738723 190739177 -8890973 - MLT1G1 LTR MaLR 0 595 75 201 213 93 80 chr5 190739209 190739284 -8890866 + L2 LINE L2 3235 3310 -3 180 77 0 0 chr5 190739284 190739310 -8890840 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1588 120 4 73 chr5 190739318 190739593 -8890557 - AluSq SINE Alu -57 256 1 338 199 73 132 chr5 190739715 190739851 -8890299 + MIR SINE MIR 63 190 -72 185 132 26 0 chr5 190740685 190740723 -8889427 + GA-rich Low_complexity Low_complexity 3 41 0 2003 195 33 22 chr5 190741307 190741759 -8888391 + MLT1C LTR MaLR 1 457 -10 309 256 37 112 chr5 190742104 190742183 -8887967 - LTR33 LTR ERVL 0 521 438 1004 155 0 46 chr5 190742183 190742357 -8887793 + FRAM SINE Alu 1 166 0 309 256 37 112 chr5 190742357 190742492 -8887658 - LTR33 LTR ERVL -83 438 323 294 188 14 29 chr5 190742584 190742653 -8887497 - LTR33 LTR ERVL -348 173 106 1656 177 6 6 chr5 190743649 190743960 -8886190 - AluJo SINE Alu -1 311 1 595 204 41 27 chr5 190744191 190744338 -8885812 + MER104 DNA Tc2 30 178 -2 1244 88 0 6 chr5 190744452 190744633 -8885517 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1639 123 102 0 chr5 190744636 190744920 -8885230 - AluSq SINE Alu 0 313 1 270 254 136 9 chr5 190745117 190745227 -8884923 + MLT1L LTR MaLR 157 280 -335 361 256 201 26 chr5 190745265 190745499 -8884651 + MLT1L LTR MaLR 338 612 -3 469 264 200 39 chr5 190745504 190745834 -8884316 + L2 LINE L2 2925 3307 -6 863 170 6 12 chr5 190746032 190746197 -8883953 - AluJo SINE Alu -114 198 35 248 240 96 48 chr5 190746425 190746529 -8883621 - MIR SINE MIR -80 128 20 715 123 0 0 chr5 190746606 190746712 -8883438 - FLAM_C SINE Alu -36 107 2 185 262 0 0 chr5 190746760 190746802 -8883348 + MIR SINE MIR 105 146 -62 378 0 0 0 chr5 190746825 190746867 -8883283 + (TG)n Simple_repeat Simple_repeat 2 43 0 1672 78 0 0 chr5 190747332 190747549 -8882601 - AluSc SINE Alu -7 302 86 326 333 64 13 chr5 190747659 190747815 -8882335 + MIR SINE MIR 27 190 -72 205 339 34 0 chr5 190748117 190748176 -8881974 - MIR SINE MIR 0 262 202 518 215 25 37 chr5 190749016 190749218 -8880932 - MIR SINE MIR -31 231 33 579 336 104 39 chr5 190749337 190749921 -8880229 - L2 LINE L2 0 3313 2768 315 0 0 0 chr5 190749921 190749956 -8880194 + (TC)n Simple_repeat Simple_repeat 2 36 0 * 333 0 0 0 chr5 190749955 190749992 -8880158 + (TG)n Simple_repeat Simple_repeat 2 38 0 579 336 104 39 chr5 190749956 190750299 -8879851 - L2 LINE L2 -545 2768 2359 716 255 81 25 chr5 190750685 190750920 -8879230 - MIR SINE MIR -2 260 13 246 356 27 40 chr5 190751088 190751237 -8878913 - MIR SINE MIR -91 171 25 409 352 11 17 chr5 190751732 190751911 -8878239 + MIR SINE MIR 75 252 -10 331 293 12 110 chr5 190752327 190752447 -8877703 + MIR SINE MIR 37 138 -124 2000 115 17 0 chr5 190752447 190752743 -8877407 + AluSx SINE Alu 1 301 -11 331 293 12 110 chr5 190752743 190752786 -8877364 + MIR SINE MIR 138 184 -78 494 188 52 27 chr5 190753395 190753547 -8876603 + MIR SINE MIR 100 257 -5 271 314 114 19 chr5 190753582 190753687 -8876463 - L2 LINE L2 -8 3305 3191 782 252 78 9 chr5 190754113 190754574 -8875576 + LTR33 LTR ERVL 8 520 -1 572 231 21 28 chr5 190755159 190755302 -8874848 + MIR SINE MIR 71 212 -50 195 250 103 0 chr5 190755319 190755387 -8874763 - MIR SINE MIR -57 205 131 647 284 49 16 chr5 190755580 190755823 -8874327 - MIR SINE MIR 0 262 12 213 154 0 0 chr5 190756032 190756071 -8874079 + A-rich Low_complexity Low_complexity 1 39 0 282 326 0 12 chr5 190756939 190757025 -8873125 + L2 LINE L2 3221 3305 -8 458 283 152 11 chr5 190757482 190757673 -8872477 + MIR SINE MIR 32 249 -13 647 260 24 12 chr5 190758783 190758952 -8871198 - MIR SINE MIR -57 205 35 2158 113 10 7 chr5 190759715 190760025 -8870125 + AluSx SINE Alu 1 311 -1 220 335 97 13 chr5 190760210 190760365 -8869785 - L2 LINE L2 -217 3055 2888 214 354 73 0 chr5 190760641 190760737 -8869413 - MIR SINE MIR -83 179 77 462 18 0 0 chr5 190762250 190762305 -8867845 + (CA)n Simple_repeat Simple_repeat 1 55 0 283 220 93 67 chr5 190762976 190763126 -8867024 - L1ME4a LINE L1 0 6121 5968 861 287 58 11 chr5 190763482 190763841 -8866309 - L1ME4a LINE L1 -203 5918 5543 242 294 145 16 chr5 190764122 190764435 -8865715 - L1MC/D LINE L1 -531 5631 5574 2316 101 0 0 chr5 190764435 190764743 -8865407 + AluSx SINE Alu 1 308 -4 249 284 39 39 chr5 190765020 190765147 -8865003 + L2 LINE L2 2978 3104 -168 336 179 90 60 chr5 190765695 190765829 -8864321 + L1ME4a LINE L1 5962 6099 -22 1982 147 7 10 chr5 190765831 190766138 -8864012 - AluJb SINE Alu -6 306 1 304 376 11 0 chr5 190766295 190766388 -8863762 - L2 LINE L2 -43 3229 3136 1578 264 102 64 chr5 190766460 190766552 -8863598 - MER115 DNA AcHobo -10 683 596 24 0 0 0 chr5 190766552 190766576 -8863574 + AT_rich Low_complexity Low_complexity 1 24 0 2281 96 7 0 chr5 190766560 190766852 -8863298 - AluSp SINE Alu -19 294 1 1578 264 102 64 chr5 190766852 190767396 -8862754 - MER115 DNA AcHobo -373 320 14 720 280 45 26 chr5 190767411 190767675 -8862475 - Charlie8 DNA MER1_type -2147 270 2 227 303 15 0 chr5 190768073 190768139 -8862011 + L2 LINE L2 3194 3260 -12 704 301 32 36 chr5 190768206 190768455 -8861695 - MIR SINE MIR 0 262 15 305 260 20 56 chr5 190768600 190768796 -8861354 - MER113 DNA MER1_type? -332 189 1 234 0 0 0 chr5 190769421 190769447 -8860703 + (TG)n Simple_repeat Simple_repeat 1 26 0 374 248 74 25 chr5 190769876 190769997 -8860153 - L2 LINE L2 0 3272 3146 618 257 23 36 chr5 190770775 190770947 -8859203 - MER113 DNA MER1_type? 0 521 348 1777 153 3 30 chr5 190770947 190771247 -8858903 + AluJb SINE Alu 11 302 -10 618 257 23 36 chr5 190771247 190771519 -8858631 - MER113 DNA MER1_type? -173 348 3 187 384 0 0 chr5 190771522 190771595 -8858555 - L2 LINE L2 -548 2766 2694 307 317 138 29 chr5 190771656 190771948 -8858202 - L2 LINE L2 -703 2611 2275 639 196 159 0 chr5 190771948 190772111 -8858039 + MER5A DNA MER1_type 1 189 0 307 317 138 29 chr5 190772111 190772159 -8857991 - L2 LINE L2 -1039 2275 2234 307 212 59 59 chr5 190772162 190772247 -8857903 + MIR3 SINE MIR 89 173 -35 189 289 0 0 chr5 190772225 190772270 -8857880 + MIR SINE MIR 81 125 -83 * 1446 281 41 14 chr5 190772276 190772718 -8857432 + MLT1J LTR MaLR 23 476 -35 279 301 36 0 chr5 190772786 190772869 -8857281 + MER5A DNA MER1_type 96 181 -8 25 0 0 0 chr5 190773919 190773944 -8856206 + AT_rich Low_complexity Low_complexity 1 25 0 248 314 105 9 chr5 190774277 190774382 -8855768 + MER91C DNA MER1_type 26 140 0 23 0 0 0 chr5 190774726 190774749 -8855401 + AT_rich Low_complexity Low_complexity 1 23 0 198 103 0 0 chr5 190775018 190775047 -8855103 + (A)n Simple_repeat Simple_repeat 1 29 0 1781 114 99 40 chr5 190775343 190775695 -8854455 + THE1C LTR MaLR 1 373 -2 526 272 110 7 chr5 190775712 190775906 -8854244 - MIR SINE MIR -51 211 2 412 282 34 43 chr5 190775970 190776087 -8854063 - L2 LINE L2 0 3272 3157 225 371 104 30 chr5 190776883 190777085 -8853065 - L2 LINE L2 -90 3182 2966 246 128 0 0 chr5 190778076 190778115 -8852035 + (CGG)n Simple_repeat Simple_repeat 2 40 0 185 154 26 0 chr5 190778115 190778154 -8851996 + GA-rich Low_complexity Low_complexity 3 42 0 30 27 0 0 chr5 190778820 190778857 -8851293 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr5 190780851 190780881 -8849269 + AT_rich Low_complexity Low_complexity 1 30 0 483 231 26 26 chr5 190781507 190781624 -8848526 - MIR SINE MIR -73 189 73 207 0 0 0 chr5 190781943 190781966 -8848184 + (T)n Simple_repeat Simple_repeat 1 23 0 306 0 0 0 chr5 190782674 190782708 -8847442 + (TG)n Simple_repeat Simple_repeat 1 34 0 805 115 0 9 chr5 190783016 190783129 -8847021 + FLAM_A SINE Alu 13 124 -18 1995 127 45 7 chr5 190783659 190783951 -8846199 - AluJb SINE Alu -9 303 1 2301 103 0 0 chr5 190784008 190784309 -8845841 + AluSx SINE Alu 1 301 -11 424 233 11 0 chr5 190784325 190784415 -8845735 - MIR SINE MIR -44 218 128 202 158 26 26 chr5 190784679 190784717 -8845433 - L2 LINE L2 -25 3247 3210 21 36 0 0 chr5 190786028 190786056 -8844094 + AT_rich Low_complexity Low_complexity 1 28 0 932 120 0 8 chr5 190786447 190786580 -8843570 + AluJb SINE Alu 1 132 -180 21 0 0 0 chr5 190787674 190787695 -8842455 + AT_rich Low_complexity Low_complexity 1 21 0 333 319 43 0 chr5 190787902 190787996 -8842154 + MIR SINE MIR 47 144 -64 323 260 164 27 chr5 190787977 190788074 -8842076 - MER5B DNA MER1_type -6 172 90 * 2104 43 31 0 chr5 190788074 190788328 -8841822 - AluY SINE Alu -14 297 36 323 260 164 27 chr5 190788328 190788376 -8841774 - MER5B DNA MER1_type -88 90 7 198 0 0 0 chr5 190788483 190788505 -8841645 + (T)n Simple_repeat Simple_repeat 1 22 0 330 45 0 0 chr5 190788559 190788603 -8841547 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 216 288 38 12 chr5 190788995 190789075 -8841075 + MIR SINE MIR 67 148 -60 666 164 55 14 chr5 190789131 190789277 -8840873 + L1MD2 LINE L1 6169 6320 -39 655 135 21 0 chr5 190789277 190789373 -8840777 + FLAM_C SINE Alu 23 120 -23 38 0 0 0 chr5 190789414 190789452 -8840698 + AT_rich Low_complexity Low_complexity 1 38 0 1530 157 84 28 chr5 190789457 190789743 -8840407 + AluJb SINE Alu 1 302 -10 1979 145 45 3 chr5 190790000 190790289 -8839861 - AluJb SINE Alu -11 301 1 2357 96 0 0 chr5 190790346 190790647 -8839503 + AluSx SINE Alu 1 301 -11 424 233 11 0 chr5 190790663 190790753 -8839397 - MIR SINE MIR -44 218 128 240 184 0 0 chr5 190791017 190791055 -8839095 - L2 LINE L2 -25 3247 3210 21 36 0 0 chr5 190792366 190792394 -8837756 + AT_rich Low_complexity Low_complexity 1 28 0 932 120 0 8 chr5 190792785 190792918 -8837232 + AluJb SINE Alu 1 132 -180 180 195 0 24 chr5 190793444 190793485 -8836665 - L2 LINE L2 -1 3312 3273 21 36 0 0 chr5 190793776 190793804 -8836346 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr5 190794173 190794209 -8835941 + AT_rich Low_complexity Low_complexity 1 36 0 383 245 51 10 chr5 190794407 190794505 -8835645 + MIR SINE MIR 34 135 -73 1885 135 43 3 chr5 190794691 190794973 -8835177 - AluSx SINE Alu -19 293 1 22 0 0 0 chr5 190794978 190795000 -8835150 + AT_rich Low_complexity Low_complexity 1 22 0 785 227 9 18 chr5 190795144 190795364 -8834786 - L1MC5 LINE L1 -35 7926 7709 2246 92 7 0 chr5 190796131 190796425 -8833725 + AluSp SINE Alu 1 296 -17 286 330 69 23 chr5 190796788 190796961 -8833189 - MIR SINE MIR -10 252 72 416 203 145 51 chr5 190797628 190797766 -8832384 + MIR SINE MIR 56 206 -56 706 206 133 0 chr5 190799459 190799624 -8830526 + MER5A DNA MER1_type 3 189 0 21 0 0 0 chr5 190800013 190800034 -8830116 + AT_rich Low_complexity Low_complexity 1 21 0 549 274 63 32 chr5 190800121 190800311 -8829839 + MIR SINE MIR 10 205 -57 197 94 94 0 chr5 190800557 190800589 -8829561 - L2 LINE L2 -16 3297 3263 432 291 57 48 chr5 190800714 190800832 -8829318 + MIR SINE MIR 37 161 -101 921 191 0 0 chr5 190800832 190801014 -8829136 + FRAM SINE Alu 1 46 0 432 291 57 48 chr5 190801014 190801103 -8829047 + MIR SINE MIR 161 248 -14 1998 87 62 7 chr5 190801335 190801611 -8828539 - AluSg SINE Alu -19 291 1 255 285 116 29 chr5 190801827 190801999 -8828151 - MIR3 SINE MIR -6 202 16 2257 93 0 29 chr5 190802980 190803319 -8826831 + AluSc SINE Alu 2 309 0 243 281 85 12 chr5 190803644 190803726 -8826424 - L2 LINE L2 0 3272 3185 292 264 121 22 chr5 190803876 190803967 -8826183 - L2 LINE L2 -50 3222 3123 22 0 0 0 chr5 190804665 190804687 -8825463 + AT_rich Low_complexity Low_complexity 1 22 0 240 35 0 0 chr5 190805240 190805269 -8824881 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 21 57 0 0 chr5 190805671 190805706 -8824444 + AT_rich Low_complexity Low_complexity 1 35 0 2096 119 10 3 chr5 190805709 190806002 -8824148 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr5 190806865 190806886 -8823264 + AT_rich Low_complexity Low_complexity 1 21 0 333 319 43 0 chr5 190807092 190807186 -8822964 + MIR SINE MIR 47 144 -64 292 246 183 32 chr5 190807188 190807265 -8822885 - MER5B DNA MER1_type -27 151 87 2069 47 32 0 chr5 190807265 190807518 -8822632 - AluY SINE Alu -15 296 36 292 246 183 32 chr5 190807518 190807566 -8822584 - MER5B DNA MER1_type -91 87 7 207 0 0 0 chr5 190807673 190807696 -8822454 + (T)n Simple_repeat Simple_repeat 1 23 0 294 50 0 0 chr5 190807750 190807790 -8822360 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 216 288 38 12 chr5 190808182 190808262 -8821888 + MIR SINE MIR 67 148 -60 666 164 55 14 chr5 190808318 190808464 -8821686 + L1MD2 LINE L1 6169 6320 -39 655 146 16 32 chr5 190808464 190808587 -8821563 + FLAM_C SINE Alu 23 143 0 38 0 0 0 chr5 190808601 190808639 -8821511 + AT_rich Low_complexity Low_complexity 1 38 0 1516 161 84 28 chr5 190808644 190808930 -8821220 + AluJb SINE Alu 1 302 -10 2138 114 13 3 chr5 190809187 190809485 -8820665 - AluSx SINE Alu -11 301 1 405 288 68 51 chr5 190810057 190810349 -8819801 + L2 LINE L2 3017 3313 0 282 269 258 0 chr5 190810377 190810470 -8819680 + MIR3 SINE MIR 44 160 -48 477 212 37 32 chr5 190811291 190811480 -8818670 - AluY SINE Alu -17 294 105 2075 125 0 10 chr5 190812365 190812670 -8817480 + AluSx SINE Alu 1 302 -10 22 56 0 0 chr5 190812766 190812802 -8817348 + AT_rich Low_complexity Low_complexity 1 36 0 2168 100 27 0 chr5 190815343 190815642 -8814508 + AluSq SINE Alu 1 307 -6 397 246 132 0 chr5 190818463 190818577 -8811573 + MIR3 SINE MIR 40 168 -40 187 320 32 96 chr5 190819878 190820003 -8810147 - MIR SINE MIR -62 146 30 1948 176 0 0 chr5 190820110 190820422 -8809728 - AluJb SINE Alu 0 312 1 402 256 43 26 chr5 190820718 190820835 -8809315 - L2 LINE L2 -3 3310 3192 282 331 119 26 chr5 190822465 190822616 -8807534 - MIR SINE MIR -14 248 84 25 0 0 0 chr5 190823387 190823412 -8806738 + AT_rich Low_complexity Low_complexity 1 25 0 2144 106 3 10 chr5 190824758 190825060 -8805090 + AluSx SINE Alu 1 300 -12 2103 113 3 3 chr5 190825387 190825678 -8804472 + AluSg SINE Alu 1 291 -19 3606 123 24 29 chr5 190825701 190826360 -8803790 + L1MC1 LINE L1 5661 6316 -17 226 295 0 0 chr5 190826368 190826446 -8803704 + (TA)n Simple_repeat Simple_repeat 1 78 0 1642 172 18 11 chr5 190827307 190827592 -8802558 + AluJb SINE Alu 1 287 -25 2136 117 7 10 chr5 190827946 190828245 -8801905 - AluSq SINE Alu -15 298 1 2418 72 0 10 chr5 190828596 190828900 -8801250 + AluY SINE Alu 1 301 -10 220 281 18 0 chr5 190831629 190831686 -8798464 + MIR SINE MIR 75 132 -130 1722 179 0 7 chr5 190831808 190832087 -8798063 + AluJb SINE Alu 20 296 -16 362 195 104 0 chr5 190832926 190833003 -8797147 + MIR SINE MIR 153 237 -25 2091 118 54 57 chr5 190834042 190834431 -8795719 - MLT1B LTR MaLR -2 388 1 2077 115 0 54 chr5 190834900 190835231 -8794919 - AluSq SINE Alu 0 313 1 2062 142 0 0 chr5 190836105 190836414 -8793736 - AluSx SINE Alu 0 309 1 849 164 7 0 chr5 190836894 190837034 -8793116 + FLAM_C SINE Alu 1 141 -2 312 27 0 0 chr5 190837225 190837262 -8792888 + (CATA)n Simple_repeat Simple_repeat 2 38 0 30 0 0 0 chr5 190837366 190837396 -8792754 + AT_rich Low_complexity Low_complexity 1 30 0 1523 151 76 34 chr5 190837718 190838009 -8792141 + AluSx SINE Alu 1 303 -9 294 186 151 12 chr5 190838462 190838548 -8791602 + L1ME3A LINE L1 6059 6156 -14 1731 139 18 18 chr5 190839501 190839774 -8790376 + AluSx SINE Alu 23 295 -17 1182 154 0 0 chr5 190842214 190842383 -8787767 + FRAM SINE Alu 1 166 -10 607 285 108 16 chr5 190843496 190843745 -8786405 - L2 LINE L2 -72 3241 2970 2224 245 137 62 chr5 190845408 190846279 -8783871 + L1MC4 LINE L1 6461 7266 -776 587 209 76 0 chr5 190846279 190846384 -8783766 + FLAM_A SINE Alu 2 114 -19 2224 245 137 62 chr5 190846384 190846516 -8783634 + L1MC4 LINE L1 7266 7387 -655 2105 167 19 6 chr5 190846516 190846876 -8783274 - MLT1A1 LTR MaLR 0 365 1 2224 245 137 62 chr5 190846876 190847310 -8782840 + L1MC4 LINE L1 7387 8006 -36 2131 114 4 0 chr5 190848211 190848526 -8781624 + AluSx SINE Alu 1 316 0 438 328 39 0 chr5 190849374 190849502 -8780648 + MIR SINE MIR 20 152 -110 332 286 150 7 chr5 190850112 190850259 -8779891 + MIR SINE MIR 67 234 -28 250 193 0 53 chr5 190851221 190851278 -8778872 + MER5C DNA MER1_type 1 54 -270 1921 158 0 14 chr5 190851720 190852017 -8778133 - AluSx SINE Alu -19 293 1 416 197 0 0 chr5 190852286 190852357 -8777793 - AluJ/FRAM SINE Alu -21 291 221 29 70 0 0 chr5 190853815 190853872 -8776278 + AT_rich Low_complexity Low_complexity 1 57 0 204 216 0 0 chr5 190853934 190853985 -8776165 + T-rich Low_complexity Low_complexity 1 51 0 38 22 0 0 chr5 190855764 190855809 -8774341 + AT_rich Low_complexity Low_complexity 1 45 0 38 39 0 0 chr5 190857154 190857206 -8772944 + AT_rich Low_complexity Low_complexity 1 52 0 2218 87 3 14 chr5 190859417 190859748 -8770402 - AluSp SINE Alu 0 328 1 2482 177 38 70 chr5 190861057 190861689 -8768461 + LTR9 LTR ERV1 1 612 0 258 0 0 67 chr5 190861778 190861823 -8768327 + (GGGTG)n Simple_repeat Simple_repeat 4 45 0 1338 145 72 38 chr5 190862244 190862354 -8767796 + AluJb SINE Alu 5 110 -202 219 36 0 0 chr5 190862354 190862382 -8767768 + (CAA)n Simple_repeat Simple_repeat 1 28 0 1338 145 72 38 chr5 190862382 190862533 -8767617 + AluJb SINE Alu 110 275 -37 711 155 47 31 chr5 190862596 190862725 -8767425 + FLAM_C SINE Alu 1 131 -2 2290 92 0 0 chr5 190863213 190863497 -8766653 + AluSg SINE Alu 1 284 -26 361 243 249 44 chr5 190863501 190863682 -8766468 - MIR SINE MIR 0 262 45 1125 188 5 0 chr5 190863947 190864158 -8765992 - AluJo SINE Alu 0 308 97 202 242 0 16 chr5 190864159 190864221 -8765929 + (TA)n Simple_repeat Simple_repeat 2 62 0 228 319 0 0 chr5 190864910 190864982 -8765168 + GA-rich Low_complexity Low_complexity 1 72 0 239 263 0 18 chr5 190865269 190865326 -8764824 + MIR SINE MIR 206 261 -1 325 350 39 10 chr5 190865979 190866185 -8763965 + MIR SINE MIR 1 212 -50 302 263 38 0 chr5 190866831 190866911 -8763239 + L2 LINE L2 3188 3270 -2 219 243 291 10 chr5 190867103 190867206 -8762944 - MER5A DNA MER1_type -32 157 26 279 271 144 17 chr5 190867471 190867589 -8762561 - L2 LINE L2 -2 3311 3179 384 22 0 0 chr5 190867612 190867657 -8762493 + (TG)n Simple_repeat Simple_repeat 2 46 0 851 295 143 24 chr5 190867879 190868554 -8761596 - L2 LINE L2 -2 3311 2560 2312 89 0 3 chr5 190869504 190869807 -8760343 - AluSx SINE Alu -10 302 1 403 319 30 6 chr5 190870694 190870863 -8759287 + MIR SINE MIR 2 174 -88 198 0 0 0 chr5 190871389 190871411 -8758739 + (TGG)n Simple_repeat Simple_repeat 1 22 0 40 0 0 0 chr5 190871893 190871933 -8758217 + AT_rich Low_complexity Low_complexity 1 40 0 3804 87 15 81 chr5 190872497 190872897 -8757253 - L1PB1 LINE L1 -3 6864 6516 339 25 0 0 chr5 190872897 190872937 -8757213 + (TA)n Simple_repeat Simple_repeat 2 41 0 3804 87 15 81 chr5 190872937 190873143 -8757007 - L1PB1 LINE L1 -351 6516 6298 645 21 0 97 chr5 190873143 190873235 -8756915 + L1PA4 LINE L1 6069 6152 -3 18496 147 44 15 chr5 190873240 190875392 -8754758 - L1PB1 LINE L1 -559 6308 4220 2027 130 7 7 chr5 190875392 190875693 -8754457 - AluSx SINE Alu -11 301 1 18496 147 44 15 chr5 190875693 190879663 -8750487 - L1PB1 LINE L1 -2647 4220 3 1061 297 39 20 chr5 190879777 190879824 -8750326 + L1MEc LINE L1 1021 1066 -5330 1431 167 76 4 chr5 190879824 190880108 -8750042 + AluJo SINE Alu 1 303 0 1061 297 39 20 chr5 190880108 190880649 -8749501 + L1MEc LINE L1 1066 1621 -4775 1008 228 42 0 chr5 190880861 190881102 -8749048 + L1M3f LINE L1 14 264 -5064 711 85 0 0 chr5 190881209 190881303 -8748847 + L1PBa LINE L1 1 94 -6769 552 203 163 0 chr5 190881306 190881429 -8748721 + L1M3f LINE L1 285 427 -4901 2042 177 53 14 chr5 190881439 190881857 -8748293 + L1M3f LINE L1 494 927 -4401 1070 193 16 54 chr5 190881858 190881976 -8748174 + MLT2D LTR ERVL 74 195 -219 2919 103 3 11 chr5 190881976 190882354 -8747796 - THE1C LTR MaLR 0 375 1 1070 193 16 54 chr5 190882354 190882542 -8747608 + MLT2D LTR ERVL 195 414 0 955 249 83 10 chr5 190882543 190882856 -8747294 + L1ME LINE L1 5454 5789 -381 2146 226 24 20 chr5 190882889 190883388 -8746762 - LTR31 LTR ERV1 -15 604 104 1831 119 4 0 chr5 190883472 190883733 -8746417 - AluSx SINE Alu -3 309 48 2071 87 0 4 chr5 190883870 190884134 -8746016 + AluY SINE Alu 3 265 -46 21492 43 49 8 chr5 190884235 190884477 -8745673 - L1P LINE L1 -3315 2831 2600 2911 13 0 0 chr5 190884477 190884791 -8745359 - AluYb8 SINE Alu -4 314 1 21492 43 49 8 chr5 190884791 190887268 -8742882 - L1P LINE L1 -3546 2600 1 304 342 191 2 chr5 190887541 190887939 -8742211 - L2 LINE L2 -5 3308 2836 423 72 31 41 chr5 190887946 190888043 -8742107 + (GGAGAA)n Simple_repeat Simple_repeat 5 100 0 464 308 118 5 chr5 190888050 190888245 -8741905 - L2 LINE L2 -448 2866 2650 21 0 0 0 chr5 190888296 190888317 -8741833 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 190888611 190888632 -8741518 + AT_rich Low_complexity Low_complexity 1 21 0 2081 153 0 0 chr5 190888706 190889013 -8741137 + AluSx SINE Alu 6 312 0 585 228 52 21 chr5 190889120 190889313 -8740837 - L1ME4a LINE L1 -187 5934 5736 806 282 73 34 chr5 190889642 190889857 -8740293 - L2 LINE L2 -729 2585 2380 1262 218 132 15 chr5 190889857 190890183 -8739967 - MLT1A1 LTR MaLR -1 364 1 806 282 73 34 chr5 190890183 190890403 -8739747 - L2 LINE L2 -934 2380 2133 738 271 67 28 chr5 190890428 190890793 -8739357 + LTR16A LTR ERVL 27 449 -1 764 178 7 22 chr5 190892024 190892159 -8737991 - FLAM_A SINE Alu 0 133 1 31 26 0 0 chr5 190892990 190893028 -8737122 + AT_rich Low_complexity Low_complexity 1 38 0 741 264 65 20 chr5 190893094 190893340 -8736810 - MIR SINE MIR 0 262 6 355 286 90 82 chr5 190893637 190894050 -8736100 + L1M4 LINE L1 2548 2963 -3183 31 26 0 0 chr5 190894166 190894204 -8735946 + AT_rich Low_complexity Low_complexity 1 38 0 877 248 60 20 chr5 190894270 190894520 -8735630 - MIR SINE MIR 0 262 3 251 228 63 0 chr5 190895041 190895120 -8735030 + L1ME LINE L1 367 450 -5966 4882 158 49 28 chr5 190895120 190896005 -8734145 + L1MC2 LINE L1 5433 6335 -9 748 267 104 73 chr5 190896727 190897566 -8732584 + L1ME LINE L1 856 1929 -4678 2129 127 7 0 chr5 190897566 190897865 -8732285 - AluSx SINE Alu -11 301 1 748 267 104 73 chr5 190897865 190897967 -8732183 + L1ME LINE L1 1929 2026 -4581 25 31 0 0 chr5 190897968 190898000 -8732150 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5 190898012 190898041 -8732109 + AT_rich Low_complexity Low_complexity 1 29 0 2148 274 40 17 chr5 190898223 190899053 -8731097 + L1ME LINE L1 2345 3158 -3268 22455 161 22 18 chr5 190899077 190903988 -8726162 - L1P3 LINE L1 -1454 5007 1 6553 218 95 82 chr5 190904141 190905449 -8724701 - L1MDa LINE L1 -743 5797 4508 897 158 0 7 chr5 190905449 190905588 -8724562 - AluJo SINE Alu -174 138 1 6553 218 95 82 chr5 190905588 190906296 -8723854 - L1MDa LINE L1 -2032 4508 3811 1797 183 0 3 chr5 190906296 190906586 -8723564 - AluJb SINE Alu -23 289 1 6553 218 95 82 chr5 190906586 190907184 -8722966 - L1MDa LINE L1 -2729 3811 3007 1060 175 9 69 chr5 190907192 190907409 -8722741 + MER20 DNA MER1_type 1 204 -15 1232 194 45 16 chr5 190907409 190907718 -8722432 - L1MDa LINE L1 -3555 2985 2668 1246 204 129 22 chr5 190908357 190908869 -8721281 - L1MDa LINE L1 -3859 2681 2118 802 185 0 49 chr5 190908869 190909031 -8721119 + FRAM SINE Alu 1 154 -22 351 153 0 0 chr5 190909094 190909153 -8720997 + L1MA6 LINE L1 6081 6139 -161 1127 170 64 57 chr5 190909330 190909405 -8720745 - L1MA6 LINE L1 0 6300 6227 2181 137 0 0 chr5 190909405 190909712 -8720438 - AluSx SINE Alu -5 307 1 1127 170 64 57 chr5 190909712 190909919 -8720231 - L1MA6 LINE L1 -73 6227 6016 224 263 35 0 chr5 190909941 190909998 -8720152 - L2 LINE L2 -60 3253 3195 308 312 32 0 chr5 190910035 190910128 -8720022 + MIR SINE MIR 84 179 -83 2819 38 9 0 chr5 190910378 190910716 -8719434 + L1PA5 LINE L1 5818 6158 0 906 155 60 0 chr5 190910718 190910886 -8719264 + L1MA8 LINE L1 5878 6055 -236 4581 138 23 25 chr5 190910888 190911644 -8718506 - L1MA6 LINE L1 -226 6074 5321 2438 84 0 0 chr5 190911644 190911940 -8718210 - AluSg SINE Alu -14 296 1 4581 138 23 25 chr5 190911940 190912102 -8718048 - L1MA6 LINE L1 -979 5321 5160 329 262 36 0 chr5 190912533 190912617 -8717533 + MER94 DNA DNA 1 87 -47 287 365 31 25 chr5 190912876 190913035 -8717115 - MIR SINE MIR -70 192 33 302 342 13 7 chr5 190913179 190913328 -8716822 - MIR SINE MIR -21 241 92 190 290 0 16 chr5 190915284 190915346 -8714804 - L2 LINE L2 -4 3268 3208 207 281 152 67 chr5 190915493 190915703 -8714447 - L2 LINE L2 -208 3064 2837 817 253 6 6 chr5 190916248 190916426 -8713724 + MER5B DNA MER1_type 1 178 0 203 339 0 0 chr5 190916489 190916548 -8713602 - MIR SINE MIR -159 103 45 207 323 42 21 chr5 190916972 190917068 -8713082 + MIR SINE MIR 117 214 -48 2343 64 0 3 chr5 190917086 190917405 -8712745 + AluY SINE Alu 1 318 0 225 191 0 0 chr5 190917462 190917504 -8712646 + (CA)n Simple_repeat Simple_repeat 1 42 0 312 273 91 8 chr5 190917544 190917676 -8712474 - MIR SINE MIR -91 171 29 325 239 17 102 chr5 190917962 190918138 -8712012 + MIR SINE MIR 23 183 -79 403 326 27 8 chr5 190918454 190918631 -8711519 - MIR SINE MIR -63 145 17 222 333 17 52 chr5 190919045 190919110 -8711040 + L2 LINE L2 2832 2898 -374 1049 164 13 65 chr5 190919110 190919341 -8710809 + MER20 DNA MER1_type 1 219 0 222 333 17 52 chr5 190919341 190919506 -8710644 + L2 LINE L2 2898 3054 -218 528 225 38 85 chr5 190919535 190919551 -8710599 - L2 LINE L2 0 3313 3298 497 80 13 0 chr5 190919551 190919626 -8710524 + (TCCA)n Simple_repeat Simple_repeat 1 76 0 528 225 38 85 chr5 190919626 190919902 -8710248 - L2 LINE L2 -15 3298 3035 252 196 91 0 chr5 190920707 190920795 -8709355 - MIR SINE MIR -62 146 89 480 273 38 8 chr5 190921115 190921247 -8708903 + MIR SINE MIR 47 182 -80 1630 172 17 24 chr5 190922417 190922707 -8707443 - AluJo SINE Alu -24 288 1 521 291 87 19 chr5 190922850 190923056 -8707094 + MIR SINE MIR 43 262 0 2444 76 0 22 chr5 190923340 190923654 -8706496 + AluY SINE Alu 1 307 -4 431 301 40 29 chr5 190923769 190923942 -8706208 + MIR3 SINE MIR 20 194 -14 652 241 47 26 chr5 190924204 190924395 -8705755 + MIR SINE MIR 46 240 -22 289 286 9 132 chr5 190924443 190924670 -8705480 + MIR SINE MIR 47 245 -17 1039 157 0 0 chr5 190926309 190926456 -8703694 + AluSg/x SINE Alu 131 277 -33 186 71 0 0 chr5 190926459 190926487 -8703663 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 479 308 34 4 chr5 190926508 190926771 -8703379 - L2 LINE L2 -1121 2193 1923 945 205 124 19 chr5 190927187 190927446 -8702704 - L1ME3 LINE L1 -206 5956 5671 597 240 113 94 chr5 190927603 190928070 -8702080 - MLT1K LTR MaLR 0 476 1 25 0 0 0 chr5 190928396 190928421 -8701729 + AT_rich Low_complexity Low_complexity 1 25 0 1802 257 135 6 chr5 190928547 190929072 -8701078 - MLT1E LTR MaLR 0 593 1 212 180 0 20 chr5 190929149 190929199 -8700951 + (CATA)n Simple_repeat Simple_repeat 3 51 0 2246 108 0 3 chr5 190929635 190929931 -8700219 - AluSc SINE Alu -14 295 1 198 0 0 0 chr5 190929938 190929960 -8700190 + (T)n Simple_repeat Simple_repeat 1 22 0 678 260 12 0 chr5 190930134 190930303 -8699847 - MIR SINE MIR -44 218 48 406 242 209 7 chr5 190931003 190931156 -8698994 + MIR SINE MIR 78 261 -1 257 226 10 98 chr5 190931153 190931255 -8698895 - MIR SINE MIR -64 198 106 * 415 260 42 90 chr5 190931508 190931547 -8698603 + L1ME4a LINE L1 5670 5709 -412 458 38 25 25 chr5 190931547 190931626 -8698524 + (TTTTA)n Simple_repeat Simple_repeat 2 80 0 908 70 56 42 chr5 190931626 190931768 -8698382 - L1MA1 LINE L1 -10 6292 6149 415 260 42 90 chr5 190931768 190932127 -8698023 + L1ME4a LINE L1 5707 6050 -71 321 333 52 50 chr5 190933063 190933075 -8697075 - L2 LINE L2 -411 2903 2893 2488 70 0 0 chr5 190933075 190933373 -8696777 + AluY SINE Alu 1 298 -13 321 333 52 50 chr5 190933373 190933742 -8696408 - L2 LINE L2 -421 2893 2521 326 275 208 6 chr5 190933758 190933936 -8696214 + MIR SINE MIR 2 215 -47 267 318 65 35 chr5 190934400 190934570 -8695580 + L1ME LINE L1 5654 5828 -293 2341 12 0 0 chr5 190934797 190935048 -8695102 + AluYa5 SINE Alu 61 311 0 201 267 5 53 chr5 190936560 190936747 -8693403 + (ATGGTG)n Simple_repeat Simple_repeat 1 178 0 232 201 16 87 chr5 190936999 190937183 -8692967 + (ATGGTG)n Simple_repeat Simple_repeat 5 175 0 237 292 69 77 chr5 190937475 190937605 -8692545 + MIR SINE MIR 28 156 -106 1925 143 3 32 chr5 190937903 190938211 -8691939 - AluJb SINE Alu -9 303 5 657 227 60 16 chr5 190938289 190938474 -8691676 - MIR SINE MIR -56 206 14 215 224 0 20 chr5 190938514 190938563 -8691587 + CT-rich Low_complexity Low_complexity 3 50 0 183 269 51 13 chr5 190938606 190938684 -8691466 - L2 LINE L2 -60 3253 3173 1931 116 4 4 chr5 190939244 190939511 -8690639 + AluSc SINE Alu 10 276 -33 2019 141 3 3 chr5 190940730 190941013 -8689137 + AluJb SINE Alu 1 283 -29 216 0 0 0 chr5 190941013 190941037 -8689113 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 583 234 152 11 chr5 190941960 190942144 -8688006 - MER63A DNA MER1_type 0 210 1 270 276 19 0 chr5 190942197 190942306 -8687844 + MIR SINE MIR 84 148 -60 392 295 114 31 chr5 190943149 190943342 -8686808 - MIR SINE MIR -14 248 40 484 299 66 20 chr5 190944060 190944257 -8685893 + MIR SINE MIR 30 235 -27 207 256 0 0 chr5 190944452 190944495 -8685655 + GA-rich Low_complexity Low_complexity 1 43 0 311 200 0 0 chr5 190944648 190944708 -8685442 + MIR3 SINE MIR 111 170 -38 1184 184 5 0 chr5 190944718 190944908 -8685242 + MER20 DNA MER1_type 1 191 -28 224 311 130 32 chr5 190945277 190945592 -8684558 + L2 LINE L2 2630 2975 -339 1065 190 10 10 chr5 190946021 190946221 -8683929 - MER3 DNA MER1_type 0 209 10 347 41 20 0 chr5 190946291 190946340 -8683810 + (CA)n Simple_repeat Simple_repeat 2 51 0 499 266 64 130 chr5 190946369 190946599 -8683551 - L1MC4a LINE L1 -1889 5919 5675 2100 183 0 16 chr5 190946599 190946970 -8683180 + MLT1A1 LTR MaLR 1 365 0 499 266 64 130 chr5 190946970 190947274 -8682876 - L1MC4a LINE L1 -2133 5675 5423 2312 116 0 0 chr5 190947274 190947584 -8682566 - AluSg SINE Alu 0 310 1 499 266 64 130 chr5 190947584 190947623 -8682527 - L1MC4a LINE L1 -2385 5423 5383 282 321 57 27 chr5 190947932 190948231 -8681919 - L1MC4a LINE L1 -1094 5052 4745 194 62 31 0 chr5 190948315 190948347 -8681803 + (TA)n Simple_repeat Simple_repeat 2 34 0 498 136 0 0 chr5 190948496 190948577 -8681573 + (TTTC)n Simple_repeat Simple_repeat 4 84 0 2137 133 10 3 chr5 190948582 190948890 -8681260 - AluSx SINE Alu -1 311 2 455 271 45 82 chr5 190948982 190949273 -8680877 - L1MC4a LINE L1 -1712 4434 4155 337 291 133 37 chr5 190949390 190949661 -8680489 - L1MC4a LINE L1 -2221 3925 3629 1923 105 8 0 chr5 190949688 190949946 -8680204 + AluY SINE Alu 52 311 0 313 310 26 0 chr5 190950830 190950946 -8679204 + L2 LINE L2 2605 2723 -591 254 261 117 29 chr5 190951794 190951973 -8678177 - MIR SINE MIR -6 256 70 272 291 118 18 chr5 190952178 190952288 -8677862 + MIR SINE MIR 124 244 -18 300 300 0 0 chr5 190953304 190953394 -8676756 - MIR SINE MIR -70 138 49 201 269 179 39 chr5 190953858 190954014 -8676136 + MIR SINE MIR 77 254 -8 212 230 150 10 chr5 190954245 190954345 -8675805 + MIR SINE MIR 74 187 -75 536 249 72 53 chr5 190954386 190954595 -8675555 + MER102a DNA MER1_type 93 305 -25 467 309 19 19 chr5 190955350 190955512 -8674638 + MIR SINE MIR 25 186 -76 1736 168 0 26 chr5 190955526 190955830 -8674320 + AluJb SINE Alu 1 296 -16 326 276 52 31 chr5 190956223 190956369 -8673781 - MIR SINE MIR -33 175 23 804 155 26 7 chr5 190956724 190956879 -8673271 - AluJb SINE Alu -1 311 154 404 285 83 0 chr5 190956913 190957057 -8673093 + L1ME3A LINE L1 5988 6143 -27 223 239 99 0 chr5 190957087 190957158 -8672992 + MIR SINE MIR 66 143 -65 1501 175 40 53 chr5 190957183 190957486 -8672664 + AluSx SINE Alu 1 299 -13 2209 109 20 0 chr5 190957681 190957975 -8672175 + AluSx SINE Alu 1 300 -12 300 120 0 0 chr5 190959300 190959350 -8670800 + (CGGGG)n Simple_repeat Simple_repeat 2 51 0 246 215 51 0 chr5 190959710 190959789 -8670361 - L1M4 LINE L1 -1696 4450 4368 1462 149 58 41 chr5 190959829 190960124 -8670026 - AluJb SINE Alu -12 300 1 2187 123 0 10 chr5 190960132 190960441 -8669709 - AluSx SINE Alu -6 306 1 417 174 74 28 chr5 190960450 190960568 -8669582 - L1ME2 LINE L1 0 6334 6033 1052 189 101 57 chr5 190960580 190960921 -8669229 - L1MB8 LINE L1 -5 6173 5817 * 1539 308 56 29 chr5 190960900 190961942 -8668208 - L1M4 LINE L1 -1865 4281 3212 621 147 60 9 chr5 190962007 190962123 -8668027 + FRAM SINE Alu 38 159 -17 323 299 94 32 chr5 190962152 190962586 -8667564 - L1M4 LINE L1 -2971 3175 2715 24 0 0 0 chr5 190962745 190962769 -8667381 + AT_rich Low_complexity Low_complexity 1 24 0 2336 92 3 10 chr5 190963064 190963368 -8666782 + AluSg SINE Alu 1 302 -8 4468 102 7 2 chr5 190963512 190964113 -8666037 - HSMAR1 DNA Mariner 0 1287 684 229 324 29 0 chr5 190964174 190964276 -8665874 - L2 LINE L2 -650 2664 2560 2215 116 3 0 chr5 190964515 190964816 -8665334 - AluSx SINE Alu -10 302 1 247 333 95 0 chr5 190964878 190964983 -8665167 - L2 LINE L2 0 3272 3158 818 256 58 8 chr5 190965128 190965370 -8664780 + MIR SINE MIR 1 254 -8 1465 222 124 0 chr5 190966264 190966674 -8663476 + MER113 DNA MER1_type? 1 461 -60 243 313 120 21 chr5 190967176 190967409 -8662741 - L2 LINE L2 -32 3240 2985 228 268 201 53 chr5 190968723 190968932 -8661218 - MIR SINE MIR -3 259 20 204 158 0 26 chr5 190971055 190971093 -8659057 + MIR SINE MIR 210 246 -16 * 238 159 0 23 chr5 190971062 190971106 -8659044 + L2 LINE L2 3261 3303 -10 213 211 0 0 chr5 190971172 190971210 -8658940 + CT-rich Low_complexity Low_complexity 1 38 0 1627 175 16 44 chr5 190971644 190971964 -8658186 - AluJo SINE Alu -1 311 1 1749 257 141 17 chr5 190972178 190972882 -8657268 - L1MC4 LINE L1 -1 8041 7251 706 267 122 35 chr5 190976503 190976758 -8653392 + LTR16B LTR ERVL 1 277 -187 1611 307 55 60 chr5 190976758 190976950 -8653200 + HERV16 LTR ERVL 2062 2253 -3232 246 62 0 0 chr5 190976950 190976982 -8653168 + (TAA)n Simple_repeat Simple_repeat 3 34 0 1611 307 55 60 chr5 190976982 190977263 -8652887 + HERV16 LTR ERVL 2253 2534 -2951 2199 120 0 7 chr5 190977263 190977563 -8652587 - AluSx SINE Alu -14 298 1 1611 307 55 60 chr5 190977563 190978254 -8651896 + HERV16 LTR ERVL 2534 3304 -2181 2485 53 33 3 chr5 190978254 190978555 -8651595 + AluY SINE Alu 1 310 -1 1611 307 55 60 chr5 190978555 190978808 -8651342 + HERV16 LTR ERVL 3304 3557 -1928 587 125 0 0 chr5 190978847 190978927 -8651223 + AluSg/x SINE Alu 214 293 -17 2533 234 54 86 chr5 190979021 190980223 -8649927 - L1MEc LINE L1 -2968 3572 2481 2518 222 19 11 chr5 190980221 190980753 -8649397 - L1MEc LINE L1 -5989 551 16 * 681 176 17 85 chr5 190980751 190980879 -8649271 + L1MD1 LINE L1 4848 4962 -1184 * 1798 143 16 57 chr5 190980879 190981194 -8648956 - AluJb SINE Alu -10 302 1 681 176 17 85 chr5 190981194 190981241 -8648909 + L1MD1 LINE L1 4962 5011 -1135 4079 135 76 37 chr5 190981275 190982062 -8648088 + L1MD1 LINE L1 5411 6228 -14 1696 198 170 56 chr5 190982117 190982794 -8647356 - L1M4 LINE L1 -1278 4868 4115 227 149 0 21 chr5 190982968 190983015 -8647135 + (TCCC)n Simple_repeat Simple_repeat 1 46 0 243 227 0 0 chr5 190983021 190983087 -8647063 + T-rich Low_complexity Low_complexity 1 66 0 279 208 0 0 chr5 190983095 190983148 -8647002 - AluJ/monomer SINE Alu 0 302 250 2102 138 26 3 chr5 190983174 190983523 -8646627 - L1MD1 LINE L1 -225 6017 5661 19815 30 2 5 chr5 190983523 190985187 -8644963 - L1PA2 LINE L1 0 6155 4502 2867 0 0 0 chr5 190985187 190985486 -8644664 - AluYa5 SINE Alu -12 299 1 19815 30 2 5 chr5 190985486 190986951 -8643199 - L1PA2 LINE L1 -1653 4502 3034 271 273 91 8 chr5 190987306 190987438 -8642712 + MIR SINE MIR 29 171 -91 225 191 0 0 chr5 190987478 190987520 -8642630 + (TG)n Simple_repeat Simple_repeat 1 42 0 2294 91 0 0 chr5 190987577 190987891 -8642259 - AluSg SINE Alu 0 319 6 21 0 0 0 chr5 190987964 190987985 -8642165 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 190988279 190988300 -8641850 + AT_rich Low_complexity Low_complexity 1 21 0 433 306 112 5 chr5 190988351 190988547 -8641603 + L2 LINE L2 2650 2866 -448 223 70 23 23 chr5 190988554 190988597 -8641553 + (TTCTCC)n Simple_repeat Simple_repeat 4 46 0 233 261 96 105 chr5 190990020 190990373 -8639777 + L2 LINE L2 2851 3200 -72 551 208 19 52 chr5 190990665 190990819 -8639331 - MER5B DNA MER1_type -28 150 2 259 314 157 0 chr5 190990839 190990992 -8639158 - MER5B DNA MER1_type 0 178 2 843 281 24 8 chr5 190992018 190992264 -8637886 + MIR SINE MIR 5 254 -8 2340 75 0 4 chr5 190992295 190992574 -8637576 + AluSc SINE Alu 1 278 -31 186 71 0 0 chr5 190992577 190992605 -8637545 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 479 308 34 4 chr5 190992626 190992889 -8637261 - L2 LINE L2 -1121 2193 1923 945 205 124 19 chr5 190993305 190993564 -8636586 - L1ME3 LINE L1 -206 5956 5671 597 240 113 94 chr5 190993721 190994188 -8635962 - MLT1K LTR MaLR 0 476 1 306 305 60 7 chr5 190994518 190994669 -8635481 + MIR SINE MIR 98 256 -6 261 359 17 50 chr5 190994717 190994898 -8635252 - MIR SINE MIR -4 258 84 1587 91 5 14 chr5 190995375 190995595 -8634555 + AluSg/x SINE Alu 75 292 -18 338 274 269 14 chr5 190995608 190995965 -8634185 + L1MC4a LINE L1 5724 6171 -1637 2212 126 0 3 chr5 190996266 190996575 -8633575 - AluSg SINE Alu -1 309 2 255 310 132 0 chr5 190999090 190999219 -8630931 - L2 LINE L2 -2 3270 3125 413 287 56 7 chr5 190999726 190999869 -8630281 - MIR SINE MIR -109 153 4 280 223 21 32 chr5 191001599 191001693 -8628457 + CT-rich Low_complexity Low_complexity 1 93 0 275 271 62 31 chr5 191001891 191002020 -8628130 + MIR SINE MIR 103 235 -27 4456 230 56 16 chr5 191002215 191003216 -8626934 - L1MC4a LINE L1 -163 7645 6588 1037 76 6 0 chr5 191003216 191003373 -8626777 + (TCTA)n Simple_repeat Simple_repeat 4 161 0 4456 230 56 16 chr5 191003373 191003554 -8626596 - L1MC4a LINE L1 -1220 6588 6416 644 214 8 0 chr5 191004074 191004205 -8625945 - FRAM SINE Alu -1 175 44 326 302 0 8 chr5 191004434 191004560 -8625590 - MER117 DNA MER1_type -32 165 41 612 274 78 45 chr5 191004658 191005024 -8625126 + MLT1J2 LTR MaLR 64 450 0 350 283 19 28 chr5 191005177 191005283 -8624867 + L2 LINE L2 2995 3099 -173 351 301 47 55 chr5 191005377 191005633 -8624517 + L2 LINE L2 2208 2461 -853 429 259 42 14 chr5 191006036 191006179 -8623971 + MIR SINE MIR 7 153 -109 260 245 0 0 chr5 191006183 191006236 -8623914 + MLT1C LTR MaLR 316 368 -99 1870 170 49 60 chr5 191006445 191006905 -8623245 + MLT1C LTR MaLR 1 363 -11 554 60 0 24 chr5 191006913 191006997 -8623153 + (TTCC)n Simple_repeat Simple_repeat 1 82 0 22920 123 8 12 chr5 191007541 191011182 -8618968 + L1P LINE L1 872 4499 -1647 2752 20 0 0 chr5 191011182 191011482 -8618668 + AluYa5 SINE Alu 1 300 -11 192 77 0 0 chr5 191011485 191011511 -8618639 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1401 161 17 2 chr5 191011534 191011867 -8618283 + MER21B LTR ERV1 1 459 -472 8069 139 11 11 chr5 191012061 191013619 -8616531 - L1P1 LINE L1 -638 5517 3961 293 346 59 7 chr5 191013702 191013855 -8616295 - MIR SINE MIR -70 192 32 1733 206 139 0 chr5 191014074 191014477 -8615673 + MLT1C LTR MaLR 1 459 -8 315 321 51 0 chr5 191015349 191015486 -8614664 - MER113 DNA MER1_type? -25 496 353 494 283 60 40 chr5 191015522 191015773 -8614377 - MER113 DNA MER1_type? -250 271 16 583 302 30 14 chr5 191016205 191016646 -8613504 + L1ME LINE L1 5112 5559 -603 1107 69 0 0 chr5 191016691 191016835 -8613315 - L1PA5 LINE L1 -2 6152 6009 253 264 0 55 chr5 191017001 191017092 -8613058 + L1P4 LINE L1 5731 5816 -350 2315 122 0 0 chr5 191017323 191017635 -8612515 + AluSx SINE Alu 1 312 0 1835 137 3 48 chr5 191017801 191018116 -8612034 + AluJb SINE Alu 12 312 0 223 331 63 11 chr5 191018199 191018374 -8611776 - L2 LINE L2 -785 2529 2346 322 275 44 62 chr5 191019001 191019161 -8610989 + MIR3 SINE MIR 23 179 -29 341 293 66 0 chr5 191019636 191019742 -8610408 - MER81 DNA DNA -1 113 1 1386 222 45 68 chr5 191020018 191020486 -8609664 + MLT1C LTR MaLR 2 458 -9 467 291 35 122 chr5 191020613 191021153 -8608997 + L2 LINE L2 2821 3313 0 341 206 15 0 chr5 191021246 191021314 -8608836 - MIR SINE MIR -141 121 53 369 301 79 76 chr5 191021659 191022001 -8608149 + L2 LINE L2 2909 3251 -21 2420 81 0 3 chr5 191022025 191022322 -8607828 - AluSc SINE Alu -13 296 1 843 281 24 8 chr5 191022353 191022599 -8607551 - MIR SINE MIR -8 254 5 888 100 38 6 chr5 191022958 191023444 -8606706 + (TCCA)n Simple_repeat Simple_repeat 1 501 0 470 292 138 5 chr5 191023448 191023643 -8606507 - MIR SINE MIR -13 249 29 516 272 193 15 chr5 191024073 191024404 -8605746 - L2 LINE L2 -5 3308 2919 240 269 14 85 chr5 191024601 191024742 -8605408 + MIR SINE MIR 132 262 0 884 258 178 14 chr5 191025178 191025831 -8604319 - L2 LINE L2 0 3313 2554 2990 153 14 34 chr5 191026564 191027146 -8603004 - L1MA10 LINE L1 -7 6327 5758 188 308 0 0 chr5 191027159 191027211 -8602939 + L2 LINE L2 2915 2966 -347 328 215 63 0 chr5 191027679 191027758 -8602392 + MIR SINE MIR 71 154 -108 1572 201 7 13 chr5 191027866 191028169 -8601981 - AluJo SINE Alu -4 308 8 204 125 0 0 chr5 191028256 191028288 -8601862 + (A)n Simple_repeat Simple_repeat 1 32 0 369 307 0 0 chr5 191028625 191028726 -8601424 + MIR SINE MIR 48 148 -114 234 267 99 20 chr5 191029297 191029398 -8600752 + L2 LINE L2 2976 3084 -188 471 285 73 23 chr5 191029547 191029807 -8600343 - L2 LINE L2 -4 3309 3037 183 211 70 0 chr5 191030362 191030419 -8599731 + L3 LINE CR1 1409 1469 -108 2315 66 0 0 chr5 191030801 191031074 -8599076 + AluSc SINE Alu 1 273 -36 207 0 0 0 chr5 191031079 191031102 -8599048 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 281 354 9 0 chr5 191031647 191031760 -8598390 + MIR SINE MIR 23 136 -126 2247 91 3 3 chr5 191031943 191032239 -8597911 + AluSx SINE Alu 1 296 -16 513 309 13 51 chr5 191032435 191032605 -8597545 - MIR SINE MIR -8 254 94 2301 220 83 2 chr5 191032605 191033123 -8597027 - MLT1F1 LTR MaLR -4 563 4 513 309 13 51 chr5 191033123 191033188 -8596962 - MIR SINE MIR -168 94 28 378 0 0 0 chr5 191033479 191033521 -8596629 + (TG)n Simple_repeat Simple_repeat 2 43 0 202 304 20 10 chr5 191033540 191033642 -8596508 - L2 LINE L2 -500 2814 2712 231 306 71 32 chr5 191033777 191034058 -8596092 - L2 LINE L2 -801 2513 2222 208 191 0 0 chr5 191034118 191034160 -8595990 + MIR SINE MIR 108 149 -113 476 320 66 40 chr5 191034663 191034891 -8595259 - MIR SINE MIR -1 261 28 304 223 45 35 chr5 191035788 191035902 -8594248 - MIR SINE MIR -48 160 46 222 159 16 48 chr5 191036468 191036531 -8593619 + (CAGGG)n Simple_repeat Simple_repeat 3 63 0 201 74 0 0 chr5 191036652 191036679 -8593471 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 241 260 170 0 chr5 191037293 191037393 -8592757 + L2 LINE L2 3158 3274 -39 * 305 261 62 31 chr5 191037383 191037513 -8592637 + MER91C DNA MER1_type 7 140 0 261 220 0 0 chr5 191037513 191037560 -8592590 - L2 LINE L2 -64 3208 3162 347 309 0 16 chr5 191037676 191037802 -8592348 - MIR SINE MIR -120 142 19 386 233 188 0 chr5 191038130 191038263 -8591887 - MIR SINE MIR 0 262 105 188 245 0 0 chr5 191038337 191038386 -8591764 + L2 LINE L2 3265 3313 0 315 241 0 11 chr5 191038594 191038681 -8591469 - L1ME1 LINE L1 -5 6161 6076 2795 209 49 47 chr5 191038681 191039611 -8590539 - L1ME1 LINE L1 -18 6542 5551 1319 280 31 18 chr5 191039656 191040207 -8589943 - L1ME1 LINE L1 -4405 2316 1705 1720 263 48 86 chr5 191040439 191041373 -8588777 - L1ME1 LINE L1 -5169 1361 463 801 243 240 0 chr5 191042745 191043082 -8587068 + L2 LINE L2 2896 3313 0 291 188 60 94 chr5 191043085 191043148 -8587002 + MIR SINE MIR 83 142 -120 4473 89 2 11 chr5 191043148 191043768 -8586382 + L1PA14 LINE L1 5546 6159 -2 291 188 60 94 chr5 191043768 191043821 -8586329 + MIR SINE MIR 142 195 -67 1311 72 0 0 chr5 191044241 191044421 -8585729 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 288 326 81 9 chr5 191044481 191044702 -8585448 + L2 LINE L2 2836 3072 -241 386 233 188 0 chr5 191044801 191044934 -8585216 - MIR SINE MIR 0 262 105 188 245 0 0 chr5 191045008 191045057 -8585093 + L2 LINE L2 3265 3313 0 315 241 0 11 chr5 191045265 191045352 -8584798 - L1ME1 LINE L1 -5 6161 6076 2795 209 49 47 chr5 191045352 191046282 -8583868 - L1ME1 LINE L1 -18 6217 5226 1423 272 32 18 chr5 191046327 191046861 -8583289 - L1ME1 LINE L1 -4199 2016 1513 921 239 52 111 chr5 191047111 191047742 -8582408 - L1ME1 LINE L1 -5169 1036 443 2160 16 4 4 chr5 191047888 191048133 -8582017 + AluYa5 SINE Alu 46 290 -21 901 318 96 14 chr5 191048206 191048760 -8581390 - L1ME4a LINE L1 -24 6097 5499 350 283 19 28 chr5 191050738 191050844 -8579306 + L2 LINE L2 2995 3099 -173 379 307 47 47 chr5 191050938 191051192 -8578958 + L2 LINE L2 2208 2461 -853 429 259 42 14 chr5 191051589 191051732 -8578418 + MIR SINE MIR 7 153 -109 260 245 0 0 chr5 191051736 191051789 -8578361 + MLT1C LTR MaLR 316 368 -99 1882 168 49 60 chr5 191051998 191052458 -8577692 + MLT1C LTR MaLR 1 363 -11 267 79 0 0 chr5 191052466 191052504 -8577646 + (TTCC)n Simple_repeat Simple_repeat 1 38 0 2132 134 16 0 chr5 191052863 191053168 -8576982 - AluSx SINE Alu -2 310 1 387 260 12 64 chr5 191054520 191054693 -8575457 - Charlie2a DNA MER1_type 0 2862 2699 * 641 234 63 0 chr5 191054680 191054855 -8575295 - Charlie2a DNA MER1_type -1199 1663 1478 278 261 115 66 chr5 191055014 191055240 -8574910 - Charlie2a DNA MER1_type -2549 313 77 2213 212 70 35 chr5 191055910 191056042 -8574108 + L1ME2 LINE L1 5534 5660 -504 2399 90 0 7 chr5 191056042 191056352 -8573798 + AluY SINE Alu 1 308 -3 2213 212 70 35 chr5 191056352 191056819 -8573331 + L1ME2 LINE L1 5660 6154 -10 22 0 0 0 chr5 191057067 191057089 -8573061 + AT_rich Low_complexity Low_complexity 1 22 0 680 118 0 155 chr5 191057094 191057172 -8572978 - L1PB3 LINE L1 -7 6147 6105 2139 84 42 3 chr5 191057172 191057456 -8572694 - AluSp SINE Alu -18 295 1 680 118 0 155 chr5 191057456 191057538 -8572612 - L1PB3 LINE L1 -49 6105 6012 1229 79 6 0 chr5 191057538 191057702 -8572448 - AluY SINE Alu -7 304 140 5408 140 5 5 chr5 191057702 191059092 -8571058 - L1PB3 LINE L1 -162 5992 4601 295 280 170 25 chr5 191059412 191059612 -8570538 + MIR SINE MIR 18 246 -16 557 261 87 0 chr5 191059776 191059937 -8570213 + MER58A DNA MER1_type 36 210 -14 201 233 33 33 chr5 191060341 191060401 -8569749 + L2 LINE L2 3213 3272 0 230 294 118 0 chr5 191060573 191060709 -8569441 - MIR SINE MIR -6 256 105 666 213 51 30 chr5 191060920 191061117 -8569033 - MIR SINE MIR -3 259 59 1504 83 64 9 chr5 191061196 191061414 -8568736 + L1PA10 LINE L1 5939 6168 0 392 265 126 0 chr5 191062070 191062221 -8567929 + MIR SINE MIR 92 261 -1 2101 120 7 0 chr5 191062288 191062571 -8567579 + AluSx SINE Alu 1 285 -27 22 0 0 0 chr5 191062571 191062593 -8567557 + AT_rich Low_complexity Low_complexity 1 22 0 3821 167 78 67 chr5 191062602 191063435 -8566715 - MER21B LTR ERV1 -21 842 1 213 39 0 0 chr5 191063458 191063484 -8566666 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2408 94 0 0 chr5 191063487 191063786 -8566364 - AluSg SINE Alu -11 299 1 327 356 22 11 chr5 191064637 191064817 -8565333 - MIR SINE MIR -46 216 35 185 363 30 30 chr5 191065294 191065429 -8564721 + L2 LINE L2 3133 3267 -5 355 174 87 52 chr5 191066613 191066728 -8563422 - L2 LINE L2 -15 3298 3180 565 274 90 55 chr5 191067658 191067775 -8562375 - L1M4 LINE L1 -1281 4865 4754 1986 133 11 0 chr5 191067775 191068092 -8562058 - AluSp SINE Alu 0 320 1 565 274 90 55 chr5 191068092 191068783 -8561367 - L1M4 LINE L1 -1392 4754 4027 434 221 0 27 chr5 191068884 191069210 -8560940 + (TTA)n Simple_repeat Simple_repeat 1 317 0 511 298 71 43 chr5 191069314 191069961 -8560189 - L1M4 LINE L1 -2362 3784 3120 1946 155 0 26 chr5 191069965 191070269 -8559881 - MER1B DNA MER1_type 0 339 44 331 330 68 0 chr5 191070723 191070826 -8559324 - L2 LINE L2 -42 3230 3121 317 247 82 62 chr5 191071085 191071231 -8558919 + MIR3 SINE MIR 5 153 -55 21 36 0 0 chr5 191071411 191071439 -8558711 + AT_rich Low_complexity Low_complexity 1 28 0 253 301 10 48 chr5 191072094 191072197 -8557953 - MIR SINE MIR -62 200 102 415 250 55 67 chr5 191072477 191072641 -8557509 - MIR SINE MIR -80 182 21 380 250 7 0 chr5 191072750 191072894 -8557256 + (CA)n Simple_repeat Simple_repeat 2 146 0 356 301 48 52 chr5 191073373 191073622 -8556528 - MER112 DNA MER1_type -6 254 7 331 333 36 36 chr5 191074051 191074246 -8555904 - L2 LINE L2 -7 3306 3112 606 190 69 23 chr5 191074270 191074444 -8555706 - MLT1J1 LTR MaLR -32 414 233 * 2291 164 26 5 chr5 191074432 191074852 -8555298 - MLT1C LTR MaLR -38 429 1 380 226 59 10 chr5 191074852 191074952 -8555198 - MLT1J1 LTR MaLR -341 105 1 319 301 199 10 chr5 191075710 191075906 -8554244 - MIR SINE MIR -1 261 29 529 297 135 27 chr5 191075969 191076075 -8554075 + MIR SINE MIR 4 97 -165 2205 158 19 8 chr5 191076075 191076436 -8553714 - MLT1A1 LTR MaLR 0 365 1 529 297 135 27 chr5 191076436 191076551 -8553599 + MIR SINE MIR 97 249 -13 315 309 0 0 chr5 191076569 191076653 -8553497 + L2 LINE L2 2990 3073 -240 306 299 84 19 chr5 191076658 191076812 -8553338 + MIR SINE MIR 27 190 -72 890 222 22 0 chr5 191076890 191077075 -8553075 + MER5A DNA MER1_type 1 189 0 521 188 12 97 chr5 191077107 191077272 -8552878 - MER104 DNA Tc2 -25 155 5 439 238 28 63 chr5 191077330 191077473 -8552677 + MER5B DNA MER1_type 2 139 -39 596 251 197 0 chr5 191077883 191078066 -8552084 - MIR SINE MIR -10 252 34 428 163 76 43 chr5 191078224 191078316 -8551834 - MIR SINE MIR -52 210 116 244 156 9 5 chr5 191078322 191078374 -8551776 - MIR SINE MIR -62 146 99 364 267 57 0 chr5 191078452 191078557 -8551593 + L2 LINE L2 3142 3252 -20 315 352 11 33 chr5 191078708 191078890 -8551260 + Charlie8 DNA MER1_type 105 282 -2135 2860 22 0 0 chr5 191079352 191079665 -8550485 + AluYb8 SINE Alu 1 313 -5 198 0 0 0 chr5 191079820 191079842 -8550308 + (CAAAA)n Simple_repeat Simple_repeat 5 26 0 517 272 39 33 chr5 191079842 191080022 -8550128 - MIR SINE MIR -43 219 39 183 315 62 48 chr5 191080647 191080793 -8549357 + L2 LINE L2 2843 2990 -282 1220 247 117 58 chr5 191081146 191081685 -8548465 - MLT1K LTR MaLR -2 586 16 741 286 9 40 chr5 191082103 191082327 -8547823 - MIR SINE MIR 0 262 46 227 234 0 0 chr5 191082496 191082543 -8547607 - MLT1K LTR MaLR 0 588 542 732 164 57 47 chr5 191082544 191082747 -8547403 + L1MA8 LINE L1 6072 6279 -12 308 145 29 0 chr5 191082747 191082816 -8547334 + L1MA8 LINE L1 6217 6287 -4 732 164 57 47 chr5 191082816 191082830 -8547320 + L1MA8 LINE L1 6279 6291 0 568 306 90 34 chr5 191082980 191083303 -8546847 - MLT1K LTR MaLR -236 352 12 2306 125 0 3 chr5 191083304 191083617 -8546533 + AluSx SINE Alu 1 312 0 298 317 90 42 chr5 191083817 191083984 -8546166 + MIR SINE MIR 24 198 -64 2132 121 7 10 chr5 191084012 191084310 -8545840 - AluSx SINE Alu -15 297 1 582 291 86 55 chr5 191084525 191085013 -8545137 - L2 LINE L2 0 3313 2811 480 250 53 33 chr5 191086716 191086868 -8543282 + MIR SINE MIR 84 238 -24 201 178 44 156 chr5 191087183 191087273 -8542877 + L2 LINE L2 3027 3106 -166 216 182 0 23 chr5 191087328 191087372 -8542778 + C-rich Low_complexity Low_complexity 2 44 0 213 325 187 10 chr5 191088058 191088261 -8541889 - MIR SINE MIR -18 244 6 249 181 57 95 chr5 191088311 191088416 -8541734 - MIR SINE MIR -140 122 22 245 335 105 68 chr5 191088871 191089062 -8541088 - L2 LINE L2 -3 3269 3072 264 367 17 11 chr5 191089753 191089890 -8540260 + MIR SINE MIR 34 171 -91 687 90 0 0 chr5 191089942 191090042 -8540108 + (CA)n Simple_repeat Simple_repeat 1 100 0 281 298 30 8 chr5 191090046 191090177 -8539973 + L1ME LINE L1 5686 5819 -302 290 326 78 0 chr5 191091500 191091641 -8538509 + L2 LINE L2 2636 2787 -527 243 279 234 0 chr5 191092505 191092616 -8537534 + L2 LINE L2 3136 3272 0 332 320 10 0 chr5 191092646 191092743 -8537407 + MIR SINE MIR 92 189 -73 487 353 80 0 chr5 191093006 191093212 -8536938 - MIR SINE MIR -8 254 31 257 280 70 0 chr5 191094509 191094609 -8535541 + L2 LINE L2 3190 3296 -17 396 321 35 14 chr5 191094655 191094870 -8535280 - MIR SINE MIR -38 224 3 828 284 59 81 chr5 191095408 191095639 -8534511 - L1MC4a LINE L1 -1883 5925 5690 2032 124 42 0 chr5 191095639 191095957 -8534193 + AluSx SINE Alu 1 330 0 828 284 59 81 chr5 191095957 191096318 -8533832 - L1MC4a LINE L1 -2118 5690 5344 272 289 50 56 chr5 191096469 191096546 -8533604 + MIR3 SINE MIR 3 79 -146 1492 155 107 69 chr5 191096546 191096921 -8533229 + MLT1B LTR MaLR 1 389 -1 272 289 50 56 chr5 191096921 191097015 -8533135 + MIR3 SINE MIR 79 169 -56 348 261 42 23 chr5 191097213 191097344 -8532806 + MIR3 SINE MIR 63 199 -9 182 321 0 18 chr5 191097653 191097709 -8532441 - L2 LINE L2 -5 3267 3213 * 318 375 7 13 chr5 191097700 191097852 -8532298 + MIR SINE MIR 24 174 -88 3821 108 68 17 chr5 191098538 191099171 -8530979 - L1PA16 LINE L1 -1 6165 5497 2382 68 3 0 chr5 191099171 191099182 -8530968 - AluY SINE Alu -17 294 285 372 22 0 0 chr5 191099182 191099227 -8530923 + (TG)n Simple_repeat Simple_repeat 2 46 0 2382 68 3 0 chr5 191099227 191099507 -8530643 - AluY SINE Alu -26 285 2 3821 108 68 17 chr5 191099507 191099522 -8530628 - L1PA16 LINE L1 -669 5497 5484 7388 182 20 1 chr5 191099543 191101687 -8528463 - L1PA14 LINE L1 -1 6160 3958 1029 181 93 0 chr5 191101695 191101910 -8528240 - L1MB3 LINE L1 -47 6136 5902 548 166 54 4 chr5 191101900 191102045 -8528105 - L1MB3 LINE L1 -622 5561 5412 * 327 224 73 88 chr5 191102366 191102558 -8527592 - LTR67 LTR ERVL 0 557 369 1818 117 53 33 chr5 191103158 191103457 -8526693 - AluJo SINE Alu -7 305 1 224 306 59 24 chr5 191103830 191103915 -8526235 - MIR SINE MIR -71 191 104 297 291 49 25 chr5 191104395 191104535 -8525615 + MLT1J2 LTR MaLR 1 145 -267 * 1726 153 73 0 chr5 191104533 191104833 -8525317 - MER47A DNA MER2_type -44 322 1 397 309 113 6 chr5 191104850 191105018 -8525132 - L2 LINE L2 -2741 573 388 265 292 31 31 chr5 191105020 191105116 -8525034 - L2 LINE L2 -3178 136 41 393 252 68 0 chr5 191106053 191106156 -8523994 - MIR SINE MIR -29 233 124 2442 145 25 2 chr5 191106166 191106572 -8523578 + L1PB3 LINE L1 5740 6154 0 469 271 124 45 chr5 191107162 191107476 -8522674 + MLT1K LTR MaLR 190 528 -60 23 0 0 0 chr5 191108096 191108119 -8522031 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 191108704 191108734 -8521416 + AT_rich Low_complexity Low_complexity 1 30 0 495 267 74 56 chr5 191108803 191109073 -8521077 + ORSL DNA AcHobo 1 275 0 275 253 0 33 chr5 191109190 191109281 -8520869 + (GGGTG)n Simple_repeat Simple_repeat 4 91 0 431 326 34 0 chr5 191109757 191109932 -8520218 - MLT1K LTR MaLR -359 229 49 256 336 87 0 chr5 191110351 191110455 -8519695 + MIR SINE MIR 101 213 -49 452 306 41 0 chr5 191111154 191111301 -8518849 - MIR SINE MIR -82 180 28 1777 171 55 26 chr5 191111717 191112137 -8518013 - L1MB8 LINE L1 -12 6166 5735 601 162 43 92 chr5 191112425 191112610 -8517540 - MER104 DNA MER2_type -4 176 1 2472 175 72 0 chr5 191114998 191115483 -8514667 - L1MC1 LINE L1 0 6333 5814 204 40 0 0 chr5 191115542 191115567 -8514583 + (TAA)n Simple_repeat Simple_repeat 2 26 0 537 365 91 32 chr5 191115696 191116101 -8514049 - L1MC1 LINE L1 -426 5695 5267 316 261 54 39 chr5 191116283 191116413 -8513737 - L1MC4a LINE L1 -1954 5854 5723 * 2270 169 29 7 chr5 191116386 191116801 -8513349 - L1MC1 LINE L1 -465 5868 5445 976 223 117 11 chr5 191116907 191117266 -8512884 + MLT1J2 LTR MaLR 35 445 -1 3636 146 24 13 chr5 191117287 191117884 -8512266 + LTR26 LTR ERV1 1 603 0 543 263 38 8 chr5 191117915 191118048 -8512102 + MIR SINE MIR 124 260 -2 972 183 38 5 chr5 191118623 191118836 -8511314 - MLT1D LTR MaLR 0 505 286 1222 116 79 0 chr5 191118863 191119106 -8511044 - L1MA3 LINE L1 -3 6297 6037 733 192 82 46 chr5 191119113 191119332 -8510818 - MLT1D LTR MaLR -271 234 8 257 297 146 81 chr5 191120261 191120733 -8509417 + MLT1K LTR MaLR 20 522 -66 190 316 31 41 chr5 191120816 191120914 -8509236 - MIR SINE MIR 0 262 166 334 323 108 25 chr5 191121378 191121536 -8508614 - MIR SINE MIR -72 190 20 1965 144 90 49 chr5 191121822 191122233 -8507917 - MSTC LTR MaLR 0 428 1 1310 178 19 4 chr5 191123350 191123608 -8506542 + L1MA9 LINE L1 6011 6272 -40 1214 152 5 0 chr5 191123630 191123827 -8506323 + MER6 DNA MER2_type 668 865 0 2388 97 0 0 chr5 191123832 191124130 -8506020 - AluSq SINE Alu -14 299 2 227 152 0 65 chr5 191124137 191124183 -8505967 + L1MA9 LINE L1 6269 6311 -1 190 0 67 0 chr5 191125095 191125125 -8505025 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 192 293 61 37 chr5 191125785 191125867 -8504283 + MIR SINE MIR 60 143 -65 256 340 41 20 chr5 191126127 191126274 -8503876 + MLT1J LTR MaLR 360 509 -2 747 269 76 43 chr5 191126396 191126816 -8503334 + MLT1K LTR MaLR 155 588 0 180 0 0 0 chr5 191126861 191126881 -8503269 + (CA)n Simple_repeat Simple_repeat 2 21 0 201 39 0 0 chr5 191128046 191128072 -8502078 + (A)n Simple_repeat Simple_repeat 1 26 0 180 333 0 15 chr5 191128583 191128649 -8501501 - MIR SINE MIR -170 92 28 931 273 66 42 chr5 191128781 191129188 -8500962 + MLT1J LTR MaLR 28 444 -67 1428 251 127 35 chr5 191129195 191129941 -8500209 + L2 LINE L2 2401 3250 -63 2282 48 41 31 chr5 191129941 191130233 -8499917 - AluY SINE Alu -16 295 1 1428 251 127 35 chr5 191130233 191130299 -8499851 + L2 LINE L2 3250 3309 -4 1656 206 111 100 chr5 191130345 191130532 -8499618 - L1MC5 LINE L1 -53 7908 7724 889 143 0 0 chr5 191130532 191130658 -8499492 - FLAM_C SINE Alu -7 126 1 1656 206 111 100 chr5 191130658 191130672 -8499478 - L1MC5 LINE L1 -237 7724 7712 2219 106 0 26 chr5 191130672 191130983 -8499167 - AluSx SINE Alu -9 303 1 1656 206 111 100 chr5 191130983 191131619 -8498531 - L1MC5 LINE L1 -249 7712 7061 21 0 0 0 chr5 191132112 191132133 -8498017 + AT_rich Low_complexity Low_complexity 1 21 0 297 286 93 19 chr5 191132691 191132852 -8497298 + MIR SINE MIR 90 262 0 2319 89 0 0 chr5 191133016 191133333 -8496817 - AluSx SINE Alu 0 317 1 187 339 103 45 chr5 191134128 191134710 -8495440 - L2 LINE L2 -517 2797 2182 2234 125 0 22 chr5 191135825 191136144 -8494006 + AluSx SINE Alu 1 312 0 2172 115 10 3 chr5 191136942 191137246 -8492904 - AluSc SINE Alu -3 306 1 2068 118 31 0 chr5 191138088 191138377 -8491773 - AluSq SINE Alu -15 298 1 559 225 101 28 chr5 191138671 191138889 -8491261 + MLT1D LTR MaLR 59 292 -213 2172 115 10 3 chr5 191139118 191139422 -8490728 - AluSc SINE Alu -3 306 1 399 293 54 7 chr5 191139624 191139771 -8490379 - MLT1L LTR MaLR -41 574 421 33 0 0 0 chr5 191139812 191139845 -8490305 + AT_rich Low_complexity Low_complexity 1 33 0 2068 118 31 0 chr5 191140238 191140527 -8489623 - AluSq SINE Alu -15 298 1 1655 192 96 24 chr5 191140822 191141239 -8488911 + MLT1D LTR MaLR 59 505 0 1734 188 132 22 chr5 191142378 191142702 -8487448 - MLT1C LTR MaLR -5 462 81 1993 128 27 7 chr5 191142702 191142998 -8487152 + AluJo SINE Alu 1 302 -10 1734 188 132 22 chr5 191142998 191143089 -8487061 - MLT1C LTR MaLR -386 81 1 1445 83 0 0 chr5 191143445 191143614 -8486536 + AluSc SINE Alu 1 169 -140 568 231 7 35 chr5 191143614 191143757 -8486393 - L1MC/D LINE L1 -720 5624 5486 873 78 35 0 chr5 191143764 191143879 -8486271 + AluSg/x SINE Alu 174 292 -18 480 256 13 45 chr5 191144101 191144281 -8485869 - MIR SINE MIR -65 143 11 3463 206 41 30 chr5 191145105 191145475 -8484675 - L1ME1 LINE L1 -5 6161 5797 1820 190 79 5 chr5 191145475 191145844 -8484306 - MSTD LTR MaLR 0 396 1 3463 206 41 30 chr5 191145844 191146220 -8483930 - L1ME1 LINE L1 -369 5797 5427 2516 72 0 0 chr5 191146220 191146524 -8483626 + AluY SINE Alu 1 304 -7 3463 206 41 30 chr5 191146524 191147072 -8483078 - L1ME1 LINE L1 -739 5427 4862 1943 97 4 0 chr5 191147946 191148203 -8481947 + AluSx SINE Alu 54 311 -1 345 221 0 81 chr5 191148265 191148351 -8481799 + MLT1D LTR MaLR 1 79 -426 1661 209 14 83 chr5 191148367 191148787 -8481363 - MER21B LTR ERV1 -171 692 302 213 217 0 0 chr5 191149186 191149232 -8480918 + CT-rich Low_complexity Low_complexity 4 49 0 716 206 106 0 chr5 191149557 191149727 -8480423 + MER5A DNA MER1_type 1 188 -1 206 265 0 0 chr5 191150162 191150211 -8479939 + A-rich Low_complexity Low_complexity 1 49 0 1439 166 83 80 chr5 191150259 191150326 -8479824 - MLT1A1 LTR MaLR -3 362 297 2173 116 3 6 chr5 191150326 191150637 -8479513 + AluSq SINE Alu 1 310 -3 1439 166 83 80 chr5 191150637 191150893 -8479257 - MLT1A1 LTR MaLR -68 297 35 7676 27 9 2 chr5 191150893 191152104 -8478046 - L1PA4 LINE L1 -3 6152 4937 1439 166 83 80 chr5 191152104 191152140 -8478010 - MLT1A1 LTR MaLR -330 35 1 376 239 45 0 chr5 191152335 191152423 -8477727 - MER5A DNA MER1_type -88 101 10 272 355 9 0 chr5 191152627 191152734 -8477416 + MIR SINE MIR 47 154 -108 329 324 92 1 chr5 191153292 191153450 -8476700 + MIR SINE MIR 39 208 -54 227 31 31 0 chr5 191153461 191153493 -8476657 + (CA)n Simple_repeat Simple_repeat 1 33 0 287 227 0 34 chr5 191153786 191153874 -8476276 + MER117 DNA MER1_type 1 85 -112 1120 290 76 48 chr5 191154007 191154369 -8475781 + L1ME3A LINE L1 2841 3191 -2955 1727 164 6 26 chr5 191154369 191154681 -8475469 - AluJb SINE Alu -6 306 1 1120 290 76 48 chr5 191154681 191155387 -8474763 + L1ME3A LINE L1 3191 3955 -2191 994 39 78 8 chr5 191155387 191155515 -8474635 - MER85 DNA T2_type -2 137 1 1120 290 76 48 chr5 191155515 191155760 -8474390 + L1ME3A LINE L1 3955 4192 -1954 1129 274 108 17 chr5 191156205 191156459 -8473691 + L1ME3A LINE L1 5308 5538 -632 2304 120 0 0 chr5 191156459 191156767 -8473383 + AluSx SINE Alu 1 308 -4 1129 274 108 17 chr5 191156767 191157107 -8473043 + L1ME3A LINE L1 5538 5956 -214 230 160 32 184 chr5 191157854 191157979 -8472171 + MIR SINE MIR 101 206 -56 3450 151 13 8 chr5 191157983 191158578 -8471572 + L1MB2 LINE L1 5573 6170 -1 261 0 0 0 chr5 191159541 191159570 -8470580 + (CA)n Simple_repeat Simple_repeat 1 29 0 * 315 0 0 0 chr5 191159569 191159604 -8470546 + (TC)n Simple_repeat Simple_repeat 1 35 0 210 308 84 7 chr5 191160040 191160183 -8469967 + MIR SINE MIR 47 200 -62 482 260 59 85 chr5 191160704 191161092 -8469058 - L1ME4a LINE L1 0 6121 5744 458 220 23 53 chr5 191161459 191161591 -8468559 - L1MEc LINE L1 -6232 164 37 640 301 52 76 chr5 191162113 191162440 -8467710 + L3 LINE CR1 1158 1474 -103 2853 108 34 2 chr5 191162440 191162855 -8467295 - MSTA LTR MaLR 0 428 1 640 301 52 76 chr5 191162855 191162946 -8467204 + L3 LINE CR1 1474 1566 -11 251 318 63 10 chr5 191163431 191163595 -8466555 + MIR SINE MIR 45 218 -44 183 363 50 0 chr5 191163651 191163731 -8466419 + L2 LINE L2 3154 3237 -35 9981 184 36 61 chr5 191164063 191164477 -8465673 + L1 LINE L1 2790 3213 -2933 1757 186 0 3 chr5 191164477 191164767 -8465383 - AluJo SINE Alu -23 289 1 216 67 0 0 chr5 191164769 191164799 -8465351 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 9981 184 36 61 chr5 191164799 191164885 -8465265 + L1 LINE L1 3214 3301 -2845 1811 230 32 11 chr5 191164885 191165319 -8464831 - LTR47B LTR ERVL 0 443 1 9981 184 36 61 chr5 191165319 191165683 -8464467 + L1 LINE L1 3301 3673 -2473 194 81 27 0 chr5 191165683 191165720 -8464430 + (CAA)n Simple_repeat Simple_repeat 2 39 0 9981 184 36 61 chr5 191165720 191167397 -8462753 + L1 LINE L1 3673 5273 -873 984 226 8 8 chr5 191167385 191167628 -8462522 + L1MB2 LINE L1 3459 3701 -2445 * 534 103 0 0 chr5 191167755 191167833 -8462317 + (TA)n Simple_repeat Simple_repeat 2 79 0 1383 111 18 0 chr5 191167834 191168099 -8462051 + L1PB1 LINE L1 5794 6143 -8 5748 116 16 14 chr5 191168131 191169019 -8461131 + L1PA15 LINE L1 5276 6165 0 438 203 47 54 chr5 191169016 191169164 -8460986 + L1MB2 LINE L1 4864 5010 -1136 * 1297 244 104 4 chr5 191169378 191169850 -8460300 + L1MB2 LINE L1 5651 6169 -2 365 300 0 0 chr5 191171046 191171166 -8458984 + MIR SINE MIR 121 240 -22 802 251 137 44 chr5 191171255 191171729 -8458421 + LTR33 LTR ERVL 1 518 -3 362 297 26 19 chr5 191171787 191171942 -8458208 - MIR SINE MIR -73 189 34 276 200 0 0 chr5 191172873 191172938 -8457212 + (TCCA)n Simple_repeat Simple_repeat 2 66 0 256 369 12 0 chr5 191172963 191173131 -8457019 + (TTCA)n Simple_repeat Simple_repeat 3 172 0 231 36 0 0 chr5 191173136 191173164 -8456986 + (TCCA)n Simple_repeat Simple_repeat 2 29 0 264 224 0 0 chr5 191173240 191173307 -8456843 + (TCCA)n Simple_repeat Simple_repeat 3 69 0 228 250 31 0 chr5 191173356 191173420 -8456730 + (TCCA)n Simple_repeat Simple_repeat 4 69 0 653 270 10 39 chr5 191173471 191173675 -8456475 - MIR SINE MIR 0 262 65 246 350 67 8 chr5 191173843 191173963 -8456187 - MIR3 SINE MIR -79 129 3 1753 175 38 62 chr5 191174133 191174533 -8455617 - MLT1B LTR MaLR 0 390 1 4947 170 25 40 chr5 191175095 191175509 -8454641 + L1PB1 LINE L1 3988 4406 -1745 351 0 0 0 chr5 191175509 191175548 -8454602 + (TAAAA)n Simple_repeat Simple_repeat 4 42 0 4947 170 25 40 chr5 191175548 191176975 -8453175 + L1PB1 LINE L1 4406 5796 -355 516 105 0 0 chr5 191176975 191177051 -8453099 + (TA)n Simple_repeat Simple_repeat 2 77 0 4947 170 25 40 chr5 191177051 191177237 -8452913 + L1PB1 LINE L1 5796 5983 -168 379 210 34 55 chr5 191177558 191177748 -8452402 - MLT1K LTR MaLR -15 573 325 407 281 113 19 chr5 191177778 191177938 -8452212 - MLT1K LTR MaLR -345 243 69 312 352 32 16 chr5 191177996 191178121 -8452029 + MIR SINE MIR 28 154 -108 928 192 48 34 chr5 191178878 191179086 -8451064 + MLT1B LTR MaLR 1 211 -179 1347 133 14 0 chr5 191179086 191179297 -8450853 - L1M2 LINE L1 -708 5604 5391 221 200 0 18 chr5 191179300 191179355 -8450795 + (TA)n Simple_repeat Simple_repeat 1 54 0 670 143 57 0 chr5 191179357 191179462 -8450688 - FLAM_C SINE Alu -18 125 15 479 120 120 8 chr5 191179465 191179598 -8450552 - L1M2 LINE L1 -755 5391 5244 576 296 37 0 chr5 191180252 191180441 -8449709 - MIR SINE MIR -36 226 31 189 276 52 0 chr5 191180522 191180580 -8449570 + MIR SINE MIR 133 193 -69 320 277 43 0 chr5 191180886 191180980 -8449170 + MIR SINE MIR 86 183 -79 219 236 55 0 chr5 191182011 191182066 -8448084 + L2 LINE L2 3214 3271 -1 9529 49 11 1 chr5 191182417 191183598 -8446552 - L1P LINE L1 -1479 4667 3475 653 189 11 81 chr5 191183598 191183611 -8446539 + MER58A DNA MER1_type 45 57 -2363 1505 122 0 9 chr5 191183611 191183840 -8446310 - AluSc SINE Alu -82 227 1 653 189 11 81 chr5 191183840 191184011 -8446139 + MER58A DNA MER1_type 57 216 -8 342 183 0 0 chr5 191184034 191184105 -8446045 + (ATG)n Simple_repeat Simple_repeat 1 71 0 250 241 19 0 chr5 191185275 191185329 -8444821 + L2 LINE L2 3184 3238 -34 228 155 35 17 chr5 191185972 191186030 -8444120 + (CAA)n Simple_repeat Simple_repeat 3 61 0 303 216 0 0 chr5 191186238 191186349 -8443801 + A-rich Low_complexity Low_complexity 1 111 0 2194 172 30 23 chr5 191186646 191187116 -8443034 - L1 LINE L1 -1181 4965 4493 189 271 0 57 chr5 191187838 191187908 -8442242 + L3 LINE CR1 871 936 -641 1858 240 94 16 chr5 191188410 191188960 -8441190 - MLT1E LTR MaLR 0 593 1 1671 227 45 19 chr5 191189479 191189906 -8440244 - MER74A LTR ERVL 0 558 121 733 312 94 5 chr5 191190127 191190508 -8439642 - L2 LINE L2 -584 2730 2316 1898 216 23 67 chr5 191190512 191191021 -8439129 + MLT1D LTR MaLR 5 492 -13 2017 99 20 0 chr5 191191021 191191313 -8438837 + AluSg SINE Alu 1 298 -12 1898 216 23 67 chr5 191191313 191191325 -8438825 + MLT1D LTR MaLR 492 503 -2 216 0 0 0 chr5 191191446 191191470 -8438680 + (GA)n Simple_repeat Simple_repeat 1 24 0 4424 204 92 20 chr5 191192655 191193824 -8436326 - Charlie1 DNA MER1_type -73 2688 1436 240 245 36 93 chr5 191193898 191194037 -8436113 + MLT1J1 LTR MaLR 39 169 -277 408 228 76 107 chr5 191194312 191194509 -8435641 - L1MC5 LINE L1 -230 7731 7529 2065 109 10 10 chr5 191194509 191194821 -8435329 - AluSx SINE Alu 0 312 1 408 228 76 107 chr5 191194821 191195110 -8435040 - L1MC5 LINE L1 -432 7529 7260 1377 198 86 74 chr5 191195238 191195752 -8434398 - L1MC5 LINE L1 -735 7226 6707 309 244 130 0 chr5 191196101 191196216 -8433934 - MIR SINE MIR -62 146 17 2001 205 92 19 chr5 191196424 191196854 -8433296 + MLT2B2 LTR ERVL 2 472 -43 414 0 0 0 chr5 191196854 191196900 -8433250 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 2001 205 92 19 chr5 191196900 191196948 -8433202 + MLT2B2 LTR ERVL 472 515 0 484 140 21 0 chr5 191197035 191197128 -8433022 + GA-rich Low_complexity Low_complexity 2 96 0 1316 85 24 71 chr5 191197229 191197441 -8432709 + MLT2A1 LTR ERVL 243 444 0 238 315 14 0 chr5 191197906 191197979 -8432171 + L2 LINE L2 3194 3267 -5 234 148 37 19 chr5 191198087 191198141 -8432009 + CT-rich Low_complexity Low_complexity 2 56 0 232 313 62 0 chr5 191199043 191199123 -8431027 - MIR SINE MIR -58 150 66 2092 134 0 0 chr5 191199228 191199534 -8430616 + AluSx SINE Alu 1 306 -6 600 341 37 67 chr5 191202919 191203324 -8426826 - L2 LINE L2 0 3272 2880 312 262 0 0 chr5 191204001 191204062 -8426088 + MER81 DNA DNA 32 92 -22 1724 136 36 0 chr5 191204074 191204375 -8425775 - L1MB7 LINE L1 -284 5900 5589 461 298 0 0 chr5 191204375 191204479 -8425671 - MER81 DNA DNA -10 104 1 346 295 89 78 chr5 191204726 191205202 -8424948 + L1ME LINE L1 644 1088 -4982 365 134 0 15 chr5 191205235 191205302 -8424848 + (GGA)n Simple_repeat Simple_repeat 2 67 0 422 315 14 51 chr5 191205304 191205580 -8424570 + HAL1b LINE L1 373 638 -710 647 181 164 23 chr5 191206306 191206477 -8423673 + MIR SINE MIR 34 228 -34 223 248 274 26 chr5 191207198 191207295 -8422855 + MIR SINE MIR 58 130 -132 2302 78 0 3 chr5 191207295 191207602 -8422548 + AluSx SINE Alu 1 306 -6 223 248 274 26 chr5 191207602 191207657 -8422493 + MIR SINE MIR 130 248 -14 232 222 0 19 chr5 191207688 191207742 -8422408 + (TTA)n Simple_repeat Simple_repeat 1 53 0 403 280 0 8 chr5 191208177 191208295 -8421855 + MIR SINE MIR 25 141 -67 334 250 158 21 chr5 191208764 191208916 -8421234 - MIR SINE MIR -52 210 41 188 57 0 57 chr5 191210029 191210064 -8420086 + (TTCCC)n Simple_repeat Simple_repeat 5 37 0 556 288 40 28 chr5 191211140 191211317 -8418833 + MIR SINE MIR 2 180 -82 1379 151 27 136 chr5 191211490 191211828 -8418322 + AluJb SINE Alu 1 301 -1 1186 246 89 28 chr5 191212157 191212584 -8417566 - LTR16B LTR ERVL -11 453 1 * 1420 227 20 89 chr5 191212584 191212829 -8417321 - MLT1K LTR MaLR -67 521 319 2230 80 0 10 chr5 191212829 191213129 -8417021 + AluY SINE Alu 1 297 -14 1420 227 20 89 chr5 191213129 191213332 -8416818 - MLT1K LTR MaLR -269 319 104 4373 149 70 6 chr5 191213483 191214270 -8415880 - L1MB1 LINE L1 0 6168 5332 506 262 141 5 chr5 191214314 191214505 -8415645 - MLT1H1 LTR MaLR -2 553 337 412 212 50 38 chr5 191214616 191214757 -8415393 - MLT1H1 LTR MaLR -355 194 5 440 314 17 0 chr5 191215104 191215222 -8414928 + L2 LINE L2 3194 3313 0 311 242 0 0 chr5 191215209 191215275 -8414875 + MIR SINE MIR 92 157 -105 * 256 334 79 56 chr5 191215329 191215536 -8414614 + L2 LINE L2 2791 2992 -321 1938 113 14 0 chr5 191215536 191215819 -8414331 - AluSx SINE Alu -21 291 5 256 334 79 56 chr5 191215819 191216097 -8414053 + L2 LINE L2 2992 3285 -28 313 223 78 58 chr5 191216754 191216857 -8413293 - MIR3 SINE MIR -25 183 79 739 286 0 5 chr5 191216866 191217072 -8413078 - MER96B DNA MER1_type? -180 237 33 330 306 153 39 chr5 191217282 191217668 -8412482 - L2 LINE L2 -2 3270 2841 392 220 50 85 chr5 191219592 191219744 -8410406 - MIR SINE MIR -63 145 39 514 330 52 30 chr5 191220564 191220794 -8409356 - MIR SINE MIR -1 261 27 473 282 35 63 chr5 191220808 191220982 -8409168 - MIR SINE MIR -56 206 38 256 339 119 55 chr5 191221034 191221270 -8408880 + L2 LINE L2 2940 3190 -82 333 326 0 0 chr5 191221411 191221503 -8408647 + MER5B DNA MER1_type 1 92 -86 248 231 28 65 chr5 191221780 191221888 -8408262 + MLT1K LTR MaLR 462 565 -23 27 73 0 0 chr5 191221940 191221995 -8408155 + AT_rich Low_complexity Low_complexity 1 55 0 198 0 0 0 chr5 191222265 191222287 -8407863 + (A)n Simple_repeat Simple_repeat 1 22 0 651 304 40 78 chr5 191222686 191223264 -8406886 + L2 LINE L2 2709 3262 -10 233 276 42 68 chr5 191224244 191224400 -8405750 + MIR SINE MIR 45 192 -68 1321 233 17 43 chr5 191224400 191224686 -8405464 - MLT1C LTR MaLR 0 467 194 2475 90 0 3 chr5 191224686 191224997 -8405153 - AluSq SINE Alu -3 310 1 1321 233 17 43 chr5 191224997 191225131 -8405019 - MLT1C LTR MaLR -273 194 58 655 196 184 6 chr5 191225408 191225587 -8404563 - ORSL DNA AcHobo -50 225 15 639 343 67 3 chr5 191226439 191226736 -8403414 - L2 LINE L2 -445 2869 2554 222 336 43 72 chr5 191226762 191226970 -8403180 - L2 LINE L2 -217 3055 2854 649 267 52 5 chr5 191228023 191228214 -8401936 - MIR SINE MIR -35 227 28 540 246 103 26 chr5 191228268 191228500 -8401650 + Charlie8 DNA MER1_type 26 275 -2142 1255 231 125 0 chr5 191228711 191229062 -8401088 - MLT1D LTR MaLR -1 504 110 380 287 28 9 chr5 191229717 191229825 -8400325 - MIR SINE MIR -118 144 35 2239 88 14 10 chr5 191230304 191230598 -8399552 - AluSc SINE Alu -13 296 2 445 292 46 8 chr5 191231235 191231365 -8398785 - L2 LINE L2 -2 3270 3136 280 342 17 0 chr5 191231540 191231660 -8398490 + MIR SINE MIR 86 207 -55 27 29 0 0 chr5 191232440 191232474 -8397676 + GC_rich Low_complexity Low_complexity 1 34 0 398 85 37 24 chr5 191233460 191233542 -8396608 + GA-rich Low_complexity Low_complexity 1 83 0 2155 156 24 3 chr5 191233546 191233919 -8396231 - MLT1B LTR MaLR -8 382 2 549 272 102 38 chr5 191234314 191234549 -8395601 + MIR SINE MIR 6 255 -7 224 307 50 50 chr5 191234688 191234828 -8395322 + MIR3 SINE MIR 8 147 -61 205 179 0 0 chr5 191235385 191235424 -8394726 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 415 298 116 46 chr5 191235424 191236164 -8393986 - L2 LINE L2 0 3313 2414 252 154 0 0 chr5 191236753 191236805 -8393345 + (TG)n Simple_repeat Simple_repeat 1 52 0 364 289 50 0 chr5 191237278 191237399 -8392751 + MIR SINE MIR 46 172 -90 539 239 54 68 chr5 191237438 191237643 -8392507 - MIR SINE MIR 0 262 61 529 230 158 0 chr5 191238059 191238198 -8391952 + MER63A DNA MER1_type 12 172 -38 414 134 0 0 chr5 191238315 191238382 -8391768 + (GGAA)n Simple_repeat Simple_repeat 4 70 0 327 302 8 48 chr5 191238532 191238658 -8391492 + L1MC4a LINE L1 5973 6093 -1715 468 138 9 37 chr5 191238995 191239104 -8391046 + GA-rich Low_complexity Low_complexity 3 108 0 335 305 176 28 chr5 191239152 191239794 -8390356 - L1MC4a LINE L1 -1817 5991 5255 662 310 123 76 chr5 191239830 191240675 -8389475 - L1MC4a LINE L1 -944 5202 4318 396 103 0 0 chr5 191241603 191241661 -8388489 + (TCCC)n Simple_repeat Simple_repeat 1 58 0 194 349 116 12 chr5 191242667 191242753 -8387397 - MIR SINE MIR -73 135 41 780 163 11 11 chr5 191242953 191243131 -8387019 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 417 267 97 21 chr5 191243700 191243851 -8386299 + MIR SINE MIR 3 162 -63 232 311 53 15 chr5 191244823 191244955 -8385195 + LTR33 LTR ERVL 384 520 -1 1040 162 110 9 chr5 191245034 191245395 -8384755 - LTR47B LTR ERVL 0 443 3 448 99 165 22 chr5 191245507 191245598 -8384552 - Charlie5 DNA MER1_type 0 2623 2520 196 339 243 7 chr5 191246409 191246838 -8383312 + L2 LINE L2 2340 2875 -439 2454 98 13 49 chr5 191246838 191247227 -8382923 - THE1C LTR MaLR 0 375 1 2798 74 3 0 chr5 191247700 191248052 -8382098 + L1PA6 LINE L1 5797 6149 -5 215 403 48 0 chr5 191248503 191248627 -8381523 + L2 LINE L2 3125 3254 -18 264 288 49 18 chr5 191248798 191248961 -8381189 + MER112 DNA MER1_type 90 257 -3 2327 84 0 7 chr5 191248961 191249259 -8380891 - AluSg SINE Alu -14 296 1 2504 68 7 0 chr5 191249283 191249591 -8380559 - AluY SINE Alu -1 310 1 415 338 36 49 chr5 191250927 191251152 -8378998 - MIR SINE MIR -28 234 13 459 320 52 88 chr5 191252021 191252487 -8377663 + L2 LINE L2 2807 3255 -17 667 236 148 11 chr5 191252601 191252783 -8377367 + MIR SINE MIR 10 216 -46 407 216 193 12 chr5 191252841 191253012 -8377138 - MLT1J2 LTR MaLR -93 357 156 2061 132 0 26 chr5 191253433 191253744 -8376406 + AluJo SINE Alu 1 303 -9 198 0 0 0 chr5 191253785 191253807 -8376343 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 263 324 42 21 chr5 191255272 191255414 -8374736 - L2 LINE L2 -1 3312 3168 243 0 0 0 chr5 191255433 191255460 -8374690 + (CA)n Simple_repeat Simple_repeat 2 28 0 216 378 101 19 chr5 191255577 191255786 -8374364 - L2 LINE L2 -339 2975 2750 455 319 44 62 chr5 191255810 191256036 -8374114 + MIR SINE MIR 33 254 -8 292 208 28 42 chr5 191256244 191256316 -8373834 - MIR3 SINE MIR 0 208 138 826 120 0 0 chr5 191256332 191256440 -8373710 + AluJo SINE Alu 28 135 -177 362 261 90 0 chr5 191256892 191257003 -8373147 - MIR3 SINE MIR -76 132 12 182 333 72 9 chr5 191257127 191257238 -8372912 + L2 LINE L2 2732 2849 -465 227 337 119 20 chr5 191257436 191257688 -8372462 - L2 LINE L2 -81 3191 2915 4193 190 28 15 chr5 191257694 191258775 -8371375 + L1MB7 LINE L1 5093 6184 0 198 0 0 0 chr5 191258803 191258825 -8371325 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 403 238 266 21 chr5 191258914 191259057 -8371093 + MIR SINE MIR 84 261 -1 914 143 18 0 chr5 191259706 191259874 -8370276 + (ATGGTG)n Simple_repeat Simple_repeat 1 171 0 554 246 8 0 chr5 191259895 191260025 -8370125 - MIR SINE MIR -1 261 131 542 326 84 58 chr5 191260020 191260270 -8369880 + L2 LINE L2 2713 2955 -358 * 953 215 16 0 chr5 191260270 191260456 -8369694 + MER5A DNA MER1_type 1 189 0 542 326 84 58 chr5 191260456 191260764 -8369386 + L2 LINE L2 2955 3299 -14 264 302 0 0 chr5 191260981 191261044 -8369106 - Charlie8 DNA MER1_type -2350 67 5 21 0 0 0 chr5 191261415 191261436 -8368714 + AT_rich Low_complexity Low_complexity 1 21 0 326 259 61 23 chr5 191262237 191262368 -8367782 + L1ME4a LINE L1 5982 6117 -4 2001 163 7 7 chr5 191263529 191263835 -8366315 - AluSx SINE Alu -6 306 1 2213 123 0 7 chr5 191263954 191264256 -8365894 + AluSq SINE Alu 1 300 -13 453 264 32 58 chr5 191264696 191264851 -8365299 - MIR SINE MIR -64 198 48 201 91 0 30 chr5 191265053 191265086 -8365064 - MIR SINE MIR -13 249 218 1979 112 49 0 chr5 191265100 191265386 -8364764 - AluSx SINE Alu -12 300 1 193 277 170 11 chr5 191265462 191265556 -8364594 - MIR SINE MIR -95 167 59 284 310 34 55 chr5 191265627 191265795 -8364355 - MIR SINE MIR -62 146 3 364 288 174 0 chr5 191266145 191266277 -8363873 - L2 LINE L2 -4 3268 3114 345 217 43 11 chr5 191268069 191268161 -8361989 - L1ME3A LINE L1 0 6170 6076 532 252 128 59 chr5 191268200 191268506 -8361644 + L2 LINE L2 2984 3310 -3 3043 189 33 14 chr5 191268556 191269197 -8360953 + L1MB3 LINE L1 5457 6109 -74 181 286 89 36 chr5 191269211 191269267 -8360883 - L2 LINE L2 -76 3196 3138 2288 97 0 14 chr5 191269291 191269581 -8360569 + AluSc SINE Alu 1 286 -23 213 211 132 40 chr5 191270673 191270749 -8359401 - MIR3 SINE MIR -21 187 105 193 274 177 16 chr5 191270788 191270850 -8359300 - L2 LINE L2 -15 3298 3227 515 304 46 23 chr5 191270970 191271187 -8358963 - MIR SINE MIR -25 237 16 717 239 54 36 chr5 191271469 191271691 -8358459 - MIR SINE MIR -27 235 10 377 296 21 49 chr5 191272407 191272549 -8357601 - L2 LINE L2 -1 3312 3175 214 226 19 0 chr5 191272641 191272694 -8357456 + (TAA)n Simple_repeat Simple_repeat 3 56 0 659 293 65 117 chr5 191273285 191273900 -8356250 + L1M4 LINE L1 2512 3094 -3052 303 28 0 0 chr5 191273930 191273966 -8356184 + (TA)n Simple_repeat Simple_repeat 2 37 0 1464 197 127 62 chr5 191274121 191274624 -8355526 - MLT1F LTR MaLR -6 536 1 237 337 49 50 chr5 191275314 191275719 -8354431 + L2 LINE L2 2619 3033 -239 960 149 0 0 chr5 191276083 191276257 -8353893 + (TCCA)n Simple_repeat Simple_repeat 3 176 0 276 30 0 0 chr5 191276953 191276986 -8353164 + (TG)n Simple_repeat Simple_repeat 1 33 0 2023 165 34 3 chr5 191277052 191277404 -8352746 - MLT2D LTR ERVL -51 363 1 216 337 23 69 chr5 191277429 191277604 -8352546 + L2 LINE L2 3014 3180 -92 694 271 28 6 chr5 191277728 191277909 -8352241 + MLT1G1 LTR MaLR 43 227 -368 2476 65 0 7 chr5 191277909 191278219 -8351931 - AluY SINE Alu -3 308 1 1247 35 0 7 chr5 191278219 191278362 -8351788 - AluY SINE Alu -167 144 3 785 237 120 8 chr5 191278365 191278657 -8351493 + MLT1G1 LTR MaLR 220 593 -2 361 272 193 25 chr5 191279091 191279293 -8350857 - MIR SINE MIR -14 248 13 212 148 25 123 chr5 191279470 191279551 -8350599 - MER5C DNA MER1_type -200 124 52 231 173 0 0 chr5 191280670 191280722 -8349428 + T-rich Low_complexity Low_complexity 1 52 0 2106 108 17 0 chr5 191281513 191281801 -8348349 + AluSq SINE Alu 1 293 -20 354 312 0 0 chr5 191281975 191282068 -8348082 + L1MDb LINE L1 10 102 -6307 1942 202 25 12 chr5 191282070 191282432 -8347718 + MLT2D LTR ERVL 7 376 -38 345 24 0 0 chr5 191282432 191282474 -8347676 + (CA)n Simple_repeat Simple_repeat 2 43 0 1942 202 25 12 chr5 191282474 191282512 -8347638 + MLT2D LTR ERVL 376 412 -2 4383 218 55 71 chr5 191282512 191283498 -8346652 + L1MDb LINE L1 101 1101 -5305 2286 128 0 0 chr5 191283498 191283811 -8346339 + AluSq SINE Alu 1 313 0 4383 218 55 71 chr5 191283811 191285217 -8344933 + L1MDb LINE L1 1101 2576 -3830 201 147 0 0 chr5 191285557 191285591 -8344559 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 361 329 109 0 chr5 191286069 191286206 -8343944 - L2 LINE L2 0 3272 3121 358 317 25 0 chr5 191287129 191287249 -8342901 + MER94 DNA DNA 1 123 -11 2563 113 57 2 chr5 191287562 191287968 -8342182 - L1MB7 LINE L1 -19 6165 5738 226 326 105 11 chr5 191290506 191290687 -8339463 - L1ME2 LINE L1 -215 5949 5752 1344 164 40 4 chr5 191291238 191291488 -8338662 + L1MA8 LINE L1 5915 6173 -118 979 134 13 13 chr5 191291491 191291640 -8338510 + AluSg/x SINE Alu 130 278 -34 546 186 28 21 chr5 191291640 191291785 -8338365 + L1MA8 LINE L1 6146 6291 0 824 161 8 0 chr5 191291930 191292060 -8338090 - FLAM_C SINE Alu -12 131 1 439 167 65 7 chr5 191292618 191292707 -8337443 + MLT1C LTR MaLR 385 467 0 338 102 0 0 chr5 191292795 191292844 -8337306 + MER53 DNA DNA 3 51 -138 393 250 33 20 chr5 191293445 191293597 -8336553 + L1MC4a LINE L1 5751 5904 -1904 338 349 8 38 chr5 191293868 191293946 -8336204 + MIR SINE MIR 20 94 -168 2082 147 98 40 chr5 191293946 191294423 -8335727 + MLT1D LTR MaLR 1 505 0 338 349 8 38 chr5 191294423 191294476 -8335674 + MIR SINE MIR 94 147 -115 2969 180 12 5 chr5 191295629 191296196 -8333954 + L1MB3 LINE L1 5598 6168 -15 409 211 11 0 chr5 191296273 191296368 -8333782 + MER5B DNA MER1_type 3 98 -80 2418 111 76 25 chr5 191296406 191296813 -8333337 - MSTA LTR MaLR 0 428 1 305 274 126 0 chr5 191296996 191297091 -8333059 - MER94 DNA DNA -24 110 4 327 277 46 54 chr5 191297096 191297226 -8332924 - MIR3 SINE MIR -75 133 5 270 371 131 4 chr5 191297393 191297630 -8332520 - L2 LINE L2 -21 3251 2985 195 232 71 0 chr5 191297882 191297938 -8332212 + MIR SINE MIR 93 152 -110 24 0 0 0 chr5 191298460 191298484 -8331666 + AT_rich Low_complexity Low_complexity 1 24 0 331 279 13 0 chr5 191298515 191298594 -8331556 - L1ME3A LINE L1 -63 6107 6028 2214 112 13 16 chr5 191298853 191299166 -8330984 - AluSx SINE Alu 0 312 1 344 337 47 2 chr5 191299241 191299493 -8330657 - L1ME3A LINE L1 -703 5463 5309 1728 120 11 129 chr5 191299620 191299969 -8330181 - AluYb8 SINE Alu 0 308 1 305 175 12 50 chr5 191299969 191300049 -8330101 + L2 LINE L2 2148 2224 -1090 1231 221 70 42 chr5 191300049 191300437 -8329713 + MLT1B LTR MaLR 1 396 0 1236 274 91 50 chr5 191300450 191301479 -8328671 + L2 LINE L2 2233 3313 0 524 304 116 37 chr5 191301870 191302432 -8327718 - L1M4 LINE L1 -2902 3244 2639 2186 119 0 0 chr5 191302836 191303131 -8327019 - AluY SINE Alu -16 295 1 21 0 0 0 chr5 191303891 191303912 -8326238 + AT_rich Low_complexity Low_complexity 1 21 0 1786 142 0 0 chr5 191304038 191304292 -8325858 + AluSx SINE Alu 34 287 -25 207 0 0 0 chr5 191304297 191304320 -8325830 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1901 128 11 4 chr5 191304497 191304771 -8325379 - AluSq SINE Alu -10 303 28 354 304 55 83 chr5 191304892 191305145 -8325005 + MLT1L LTR MaLR 37 282 -333 581 159 44 9 chr5 191305260 191305373 -8324777 - L2 LINE L2 0 3313 3197 402 301 202 0 chr5 191305938 191306131 -8324019 + MIR SINE MIR 29 260 -2 211 0 88 0 chr5 191306833 191306867 -8323283 + T-rich Low_complexity Low_complexity 2 38 0 425 264 0 27 chr5 191308514 191308624 -8321526 - MIR SINE MIR -133 129 23 256 256 13 77 chr5 191308854 191308932 -8321218 + Charlie8 DNA MER1_type 1 73 -2344 285 29 0 0 chr5 191309102 191309136 -8321014 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 1140 159 20 15 chr5 191309631 191309832 -8320318 - MER63A DNA MER1_type -5 205 4 409 297 32 0 chr5 191310129 191310284 -8319866 - LTR16A LTR ERVL -22 428 269 345 299 75 0 chr5 191310283 191310417 -8319733 + Charlie8 DNA MER1_type 19 162 -2255 * 517 290 26 0 chr5 191310439 191310594 -8319556 + MIR SINE MIR 78 236 -26 381 314 26 6 chr5 191311145 191311301 -8318849 + MIR SINE MIR 78 236 -26 189 0 0 0 chr5 191311777 191311798 -8318352 + (TGG)n Simple_repeat Simple_repeat 1 21 0 263 180 40 0 chr5 191312277 191312327 -8317823 - L2 LINE L2 0 3313 3262 583 134 0 0 chr5 191312957 191313039 -8317111 - AluJ/FLAM SINE Alu -213 99 18 3076 156 22 2 chr5 191313072 191313610 -8316540 - L1MC1 LINE L1 -17 6316 5768 847 207 30 50 chr5 191313712 191313833 -8316317 - L1MC1 LINE L1 -545 5788 5671 2358 99 3 0 chr5 191313833 191314137 -8316013 - AluY SINE Alu -5 306 2 847 207 30 50 chr5 191314137 191314213 -8315937 - L1MC1 LINE L1 -662 5671 5595 583 224 105 0 chr5 191314474 191314617 -8315533 - MER5A DNA MER1_type -18 171 14 2182 100 14 0 chr5 191314947 191315236 -8314914 + AluSp SINE Alu 1 293 -20 245 206 0 41 chr5 191315238 191315311 -8314839 + G-rich Low_complexity Low_complexity 3 72 0 * 735 145 22 22 chr5 191315307 191315486 -8314664 + GA-rich Low_complexity Low_complexity 2 180 0 283 245 127 110 chr5 191316635 191316757 -8313393 - MIR SINE MIR -13 249 131 1764 166 7 7 chr5 191316757 191317064 -8313086 + AluSx SINE Alu 1 307 -5 283 245 127 110 chr5 191317064 191317178 -8312972 - MIR SINE MIR -131 131 9 442 293 40 0 chr5 191317649 191317837 -8312313 + MIR3 SINE MIR 7 204 -58 290 340 84 5 chr5 191317816 191318031 -8312119 - MIR SINE MIR 0 262 31 * 2071 107 10 13 chr5 191318263 191318561 -8311589 - AluSg SINE Alu -13 297 1 222 345 0 12 chr5 191318737 191318821 -8311329 + MIR SINE MIR 168 250 -12 195 234 21 0 chr5 191319054 191319101 -8311049 - MIR3 SINE MIR -12 196 149 240 252 81 24 chr5 191319102 191319225 -8310925 + MER113 DNA MER1_type? 6 135 -386 23 0 0 0 chr5 191320496 191320519 -8309631 + AT_rich Low_complexity Low_complexity 1 23 0 321 178 27 0 chr5 191320588 191320661 -8309489 - MIR SINE MIR -102 160 86 586 252 6 12 chr5 191321118 191321278 -8308872 + MIR SINE MIR 5 161 -47 251 323 24 16 chr5 191321847 191321971 -8308179 - MIR SINE MIR -63 145 21 321 259 210 20 chr5 191322044 191322455 -8307695 - LTR33 LTR ERVL 0 521 23 477 50 0 0 chr5 191322750 191322810 -8307340 + (CTCA)n Simple_repeat Simple_repeat 4 63 0 874 260 23 16 chr5 191322945 191323203 -8306947 - MIR SINE MIR -1 261 2 299 279 106 50 chr5 191323203 191323382 -8306768 + Charlie8 DNA MER1_type 1 189 -2228 2301 97 0 26 chr5 191324435 191324745 -8305405 - AluSx SINE Alu -10 302 1 3366 180 49 11 chr5 191325526 191325661 -8304489 + MER63C DNA MER1_type 255 383 -677 1755 184 35 32 chr5 191325661 191326008 -8304142 + MER7A DNA MER2_type 1 346 0 3366 180 49 11 chr5 191326008 191326523 -8303627 + MER63C DNA MER1_type 383 930 0 519 276 18 12 chr5 191326607 191326777 -8303373 + MIR SINE MIR 20 190 -72 665 180 8 31 chr5 191327161 191327289 -8302861 + FLAM_C SINE Alu 2 126 -17 229 203 14 58 chr5 191327353 191327422 -8302728 + L2 LINE L2 3194 3259 -13 315 272 33 0 chr5 191328098 191328190 -8301960 - MIR SINE MIR -64 198 104 245 318 133 26 chr5 191328218 191328413 -8301737 - MIR SINE MIR -33 229 14 409 127 13 0 chr5 191329257 191329336 -8300814 + L1PB1 LINE L1 6072 6151 0 40 21 0 0 chr5 191329336 191329383 -8300767 + AT_rich Low_complexity Low_complexity 1 47 0 188 232 232 24 chr5 191329514 191329596 -8300554 + MIR3 SINE MIR 13 111 -97 745 191 0 0 chr5 191329635 191329771 -8300379 - MIR SINE MIR -91 171 36 330 210 51 45 chr5 191329983 191330140 -8300010 - L1ME4a LINE L1 -30 6091 5934 970 289 55 25 chr5 191330219 191330707 -8299443 - L1ME4a LINE L1 -9 6112 5610 1905 154 0 33 chr5 191330731 191331037 -8299113 + AluJb SINE Alu 1 296 -16 26772 132 14 23 chr5 191332883 191336038 -8294112 + L1PA8A LINE L1 2 3184 -3262 2382 89 0 19 chr5 191336038 191336352 -8293798 + AluY SINE Alu 3 310 -1 26772 132 14 23 chr5 191336352 191339638 -8290512 + L1PA8A LINE L1 3184 6446 0 184 306 0 0 chr5 191339777 191339826 -8290324 - MIR SINE MIR -63 145 97 2209 133 0 0 chr5 191340542 191340851 -8289299 - AluSq SINE Alu 0 313 5 284 301 93 83 chr5 191341036 191341252 -8288898 + L2 LINE L2 3046 3263 -9 1488 190 135 49 chr5 191342628 191343059 -8287091 + MLT1D LTR MaLR 21 488 -17 218 232 107 0 chr5 191343987 191344043 -8286107 + MIR3 SINE MIR 106 167 -41 249 33 0 0 chr5 191345077 191345107 -8285043 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 1053 209 9 4 chr5 191345378 191345608 -8284542 + L1 LINE L1 2634 2864 -3282 1591 178 15 58 chr5 191345615 191345760 -8284390 + AluJo SINE Alu 1 151 -161 2282 126 0 0 chr5 191345760 191346069 -8284081 + AluSx SINE Alu 4 312 0 1591 178 15 58 chr5 191346069 191346249 -8283901 + AluJo SINE Alu 151 312 0 1057 207 5 0 chr5 191346367 191346565 -8283585 + ERVL-C1 LTR ERVL 5558 5756 -8 1386 227 19 51 chr5 191346565 191346975 -8283175 + MLT2C1 LTR ERVL 1 397 0 188 86 29 0 chr5 191346980 191347015 -8283135 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 9678 121 30 18 chr5 191347621 191349131 -8281019 - L1M1 LINE L1 -4775 2790 1263 442 209 12 0 chr5 191350557 191350643 -8279507 - MER5A DNA MER1_type -94 95 9 527 286 23 0 chr5 191350662 191350833 -8279317 - MER5B DNA MER1_type -3 175 1 276 293 107 5 chr5 191351188 191351393 -8278757 + L2 LINE L2 1546 1771 -1543 662 261 39 69 chr5 191351622 191351955 -8278195 + L2 LINE L2 2991 3313 0 1217 146 6 1 chr5 191352267 191355201 -8274949 - ALR/Alpha Satellite centromeric -2 2950 1 2166 116 0 10 chr5 191355343 191355646 -8274504 + AluSx SINE Alu 1 300 -12 480 158 0 0 chr5 191355746 191355828 -8274322 + L1MB1 LINE L1 6082 6163 -5 2268 100 0 29 chr5 191355900 191356210 -8273940 - AluSc SINE Alu -8 301 1 1227 115 6 0 chr5 191356213 191356396 -8273754 + L1MA2 LINE L1 6121 6304 0 654 222 33 71 chr5 191356453 191356665 -8273485 - MER3 DNA MER1_type -5 204 1 513 290 45 5 chr5 191356688 191356909 -8273241 - L2 LINE L2 -249 3064 2835 316 265 54 48 chr5 191356917 191357064 -8273086 + MLT1G1 LTR MaLR 163 310 -285 623 178 0 0 chr5 191357139 191357240 -8272910 + MLT1G1 LTR MaLR 446 546 -49 461 264 29 62 chr5 191357666 191357793 -8272357 - L1ME1 LINE L1 -5 6161 6044 2308 92 3 0 chr5 191357793 191358085 -8272065 + AluSq SINE Alu 1 293 -20 461 264 29 62 chr5 191358085 191358199 -8271951 - L1ME1 LINE L1 -122 6044 5928 472 86 0 0 chr5 191358209 191358279 -8271871 + AluSc SINE Alu 240 309 0 2322 212 70 44 chr5 191358282 191358704 -8271446 - L1ME1 LINE L1 -230 5934 5524 964 194 28 33 chr5 191358704 191358915 -8271235 - MER63A DNA MER1_type 0 210 1 2322 212 70 44 chr5 191358915 191359226 -8270924 - L1ME1 LINE L1 -640 5524 5223 2485 82 0 0 chr5 191359226 191359532 -8270618 - AluY SINE Alu -5 306 1 2322 212 70 44 chr5 191359532 191360146 -8270004 - L1ME1 LINE L1 -941 5223 4448 2321 93 7 0 chr5 191360146 191360446 -8269704 - AluSg SINE Alu 0 310 9 2322 212 70 44 chr5 191360446 191360492 -8269658 - L1ME1 LINE L1 -1716 4448 4405 3748 174 22 56 chr5 191360690 191360811 -8269339 + L1MB2 LINE L1 4498 4622 -1561 2154 131 0 6 chr5 191360811 191361123 -8269027 - AluSx SINE Alu -2 310 1 203 61 30 0 chr5 191361130 191361163 -8268987 + (TTG)n Simple_repeat Simple_repeat 2 35 0 1869 159 0 0 chr5 191361165 191361448 -8268702 - AluJb SINE Alu -29 283 1 3748 174 22 56 chr5 191361448 191362154 -8267996 + L1MB2 LINE L1 4629 5307 -876 1608 192 10 23 chr5 191362154 191362462 -8267688 + AluJo SINE Alu 1 304 -8 3748 174 22 56 chr5 191362462 191362618 -8267532 + L1MB2 LINE L1 5307 5467 -716 8044 14 0 0 chr5 191362618 191363582 -8266568 + L1PA2 LINE L1 5183 6155 0 3679 170 20 6 chr5 191363582 191364266 -8265884 + L1MB2 LINE L1 5476 6169 -2 1915 151 3 7 chr5 191364280 191364572 -8265578 - AluJo SINE Alu -21 291 1 890 192 305 24 chr5 191364658 191364986 -8265164 + MLT1F1 LTR MaLR 140 559 -8 2107 125 3 55 chr5 191365023 191365351 -8264799 + AluSx SINE Alu 1 311 -1 581 105 21 84 chr5 191365357 191365548 -8264602 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 742 117 0 9 chr5 191365845 191365956 -8264194 - AluJb SINE Alu -201 111 2 2206 88 41 3 chr5 191366628 191366923 -8263227 + AluSq SINE Alu 1 306 -7 297 260 124 65 chr5 191366989 191367063 -8263087 + MER5A DNA MER1_type 9 77 -112 1829 164 18 112 chr5 191367063 191367520 -8262630 - MLT2D LTR ERVL 0 414 1 297 260 124 65 chr5 191367520 191367614 -8262536 + MER5A DNA MER1_type 77 187 -2 216 264 35 81 chr5 191368843 191369017 -8261133 + (TGGG)n Simple_repeat Simple_repeat 3 168 0 609 240 136 0 chr5 191370859 191371013 -8259137 + MER45A DNA AcHobo 4 178 0 319 315 16 0 chr5 191371375 191371502 -8258648 - MER103 DNA DNA -20 146 18 512 314 122 8 chr5 191372343 191372757 -8257393 + LTR16C LTR ERVL 1 482 -9 1205 176 51 51 chr5 191372771 191373083 -8257067 - AluJo SINE Alu 0 312 1 187 267 23 35 chr5 191373267 191373353 -8256797 - L2 LINE L2 0 3272 3188 189 0 0 0 chr5 191373537 191373558 -8256592 + (A)n Simple_repeat Simple_repeat 1 21 0 1308 230 24 30 chr5 191373780 191373886 -8256264 + MER110 LTR ERV1 118 223 -268 2132 106 4 0 chr5 191373886 191374161 -8255989 + AluSx SINE Alu 1 276 -36 1308 230 24 30 chr5 191374161 191374384 -8255766 + MER110 LTR ERV1 223 445 -46 330 297 82 31 chr5 191374469 191374695 -8255455 + L2 LINE L2 2782 3016 -256 447 113 0 0 chr5 191374991 191375062 -8255088 + (TGGA)n Simple_repeat Simple_repeat 1 71 0 2208 115 0 13 chr5 191375080 191375384 -8254766 + AluSx SINE Alu 1 300 -12 1533 161 62 72 chr5 191375816 191376120 -8254030 - AluJo SINE Alu -1 311 11 2172 84 45 3 chr5 191376135 191376421 -8253729 - AluSp SINE Alu -15 298 1 329 273 101 0 chr5 191376711 191376754 -8253396 - L1MA10 LINE L1 -9 6325 6283 363 286 82 28 chr5 191376754 191376936 -8253214 - L1ME1 LINE L1 -44 6122 5931 855 128 0 0 chr5 191376969 191377110 -8253040 + (TTCC)n Simple_repeat Simple_repeat 1 141 0 317 120 0 0 chr5 191377110 191377160 -8252990 + Alu SINE Alu 248 297 -5 484 292 28 6 chr5 191377657 191377835 -8252315 - MIR SINE MIR -26 236 55 903 244 83 12 chr5 191377974 191378298 -8251852 + LTR16A1 LTR ERVL 111 457 0 256 198 216 72 chr5 191379145 191379256 -8250894 - L2 LINE L2 -4 3268 3142 208 331 63 75 chr5 191379290 191379544 -8250606 + L2 LINE L2 2935 3185 -87 255 256 73 88 chr5 191379544 191379681 -8250469 - L2 LINE L2 0 3272 3138 233 344 48 16 chr5 191381064 191381189 -8248961 - Charlie8 DNA MER1_type -2221 196 68 2249 117 7 0 chr5 191381274 191381582 -8248568 + AluSg SINE Alu 1 310 0 824 40 0 0 chr5 191383016 191383115 -8247035 + L1PA4 LINE L1 6054 6152 -3 324 256 44 22 chr5 191383336 191383473 -8246677 - MIR SINE MIR -91 171 32 290 269 11 11 chr5 191383524 191383617 -8246533 + MIR SINE MIR 157 249 -13 246 305 102 40 chr5 191383927 191384104 -8246046 - L2 LINE L2 -7 3306 3119 207 293 88 27 chr5 191384150 191384297 -8245853 + L2 LINE L2 2619 2774 -540 2029 89 0 4 chr5 191384813 191385071 -8245079 + AluY SINE Alu 35 291 -20 207 0 0 0 chr5 191385075 191385098 -8245052 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 313 338 88 7 chr5 191385289 191385425 -8244725 - MIR SINE MIR -29 233 87 474 267 110 63 chr5 191385467 191385915 -8244235 - MLT1J LTR MaLR -88 527 3 528 241 41 35 chr5 191385984 191386129 -8244021 + MER63A DNA MER1_type 52 197 -13 266 229 60 0 chr5 191386518 191386601 -8243549 + L1MC4 LINE L1 6613 6700 -1342 1188 178 24 0 chr5 191386626 191386839 -8243311 + MER20 DNA MER1_type 2 219 0 304 315 56 9 chr5 191387896 191388004 -8242146 - L2 LINE L2 -4 3309 3197 358 301 35 9 chr5 191388402 191388515 -8241635 + L2 LINE L2 3197 3312 -1 303 297 141 12 chr5 191388621 191388903 -8241247 - L2 LINE L2 -262 3051 2731 494 302 64 61 chr5 191388963 191389551 -8240599 + MLT1K LTR MaLR 3 579 -36 410 313 80 7 chr5 191392533 191392683 -8237467 - MIR SINE MIR -95 167 7 288 262 47 37 chr5 191392738 191392845 -8237305 - MIR SINE MIR -61 147 40 400 248 15 38 chr5 191393001 191393134 -8237016 + LTR67 LTR ERVL 428 557 0 341 239 194 11 chr5 191393478 191393658 -8236492 - MER113 DNA MER1_type? -304 217 5 1352 111 0 0 chr5 191394485 191394666 -8235484 + AluSg/x SINE Alu 130 310 0 2025 145 21 0 chr5 191395996 191396286 -8233864 + AluJb SINE Alu 1 296 -16 2192 118 0 10 chr5 191396470 191396774 -8233376 + AluSx SINE Alu 1 301 -11 1903 189 121 15 chr5 191397202 191397657 -8232493 + MLT1D LTR MaLR 3 505 0 275 179 75 0 chr5 191400316 191400383 -8229767 + L1ME1 LINE L1 6090 6161 -5 2184 103 0 30 chr5 191400460 191400762 -8229388 + AluSg SINE Alu 1 293 -17 524 187 72 115 chr5 191400767 191400976 -8229174 + L1MC5 LINE L1 7727 7926 -35 2015 84 70 14 chr5 191400977 191401261 -8228889 - AluSq SINE Alu -13 300 1 413 323 106 5 chr5 191401383 191401581 -8228569 - MIR SINE MIR -16 246 29 286 286 84 0 chr5 191402349 191402468 -8227682 + MIR SINE MIR 63 191 -71 284 296 61 0 chr5 191402937 191403035 -8227115 + L2 LINE L2 3168 3271 -1 1647 154 72 14 chr5 191403062 191403341 -8226809 + AluJo SINE Alu 1 295 -17 264 30 0 0 chr5 191403373 191403406 -8226744 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 5422 145 18 25 chr5 191403409 191404140 -8226010 - L1PA16 LINE L1 -7 6159 5424 183 42 0 0 chr5 191404140 191404164 -8225986 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1743 116 85 4 chr5 191404164 191404422 -8225728 - AluSg SINE Alu -31 279 1 5422 145 18 25 chr5 191404422 191404730 -8225420 - L1PA16 LINE L1 -740 5426 5126 2287 111 14 0 chr5 191405002 191405299 -8224851 + AluSg SINE Alu 1 301 -9 603 206 10 0 chr5 191405499 191405601 -8224549 - MER81 DNA DNA -11 103 1 498 291 55 20 chr5 191405625 191405664 -8224486 + MIR SINE MIR 57 93 -169 2188 88 0 0 chr5 191405664 191405936 -8224214 - AluSc SINE Alu -9 300 29 498 291 55 20 chr5 191405936 191406095 -8224055 + MIR SINE MIR 93 262 0 783 158 8 0 chr5 191406344 191406471 -8223679 + FLAM_C SINE Alu 1 128 -15 306 0 0 0 chr5 191406471 191406505 -8223645 + (TA)n Simple_repeat Simple_repeat 2 35 0 532 125 0 0 chr5 191406510 191406590 -8223560 - AluJ/FRAM SINE Alu -14 298 219 2431 80 0 19 chr5 191406752 191407065 -8223085 + AluSx SINE Alu 1 307 -5 12493 205 28 31 chr5 191407097 191407427 -8222723 + L1MD3 LINE L1 2077 2407 -3975 186 71 0 0 chr5 191407427 191407455 -8222695 + (CA)n Simple_repeat Simple_repeat 2 29 0 12493 205 28 31 chr5 191407455 191408816 -8221334 + L1MD3 LINE L1 2407 3771 -2611 198 0 0 0 chr5 191408816 191408838 -8221312 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 11269 25 0 1 chr5 191408838 191410899 -8219251 - L1PA3 LINE L1 -13 6142 4086 12493 205 28 31 chr5 191410899 191412538 -8217612 + L1MD3 LINE L1 3769 5408 -974 1002 180 0 0 chr5 191413355 191413533 -8216617 + L1MD3 LINE L1 5411 5588 -794 678 190 86 0 chr5 191413528 191413691 -8216459 - L1 LINE L1 -1002 5144 4968 * 4549 144 55 4 chr5 191413701 191414470 -8215680 + L1MA9 LINE L1 5345 6152 -160 571 117 19 10 chr5 191414479 191414582 -8215568 + GA-rich Low_complexity Low_complexity 1 104 0 447 192 138 0 chr5 191414584 191414648 -8215502 + L1MA9 LINE L1 6159 6213 -99 261 0 0 0 chr5 191414648 191414677 -8215473 + (TG)n Simple_repeat Simple_repeat 2 30 0 447 192 138 0 chr5 191414677 191414742 -8215408 + L1MA9 LINE L1 6213 6306 -6 40 21 0 0 chr5 191414742 191414789 -8215361 + AT_rich Low_complexity Low_complexity 1 47 0 394 319 63 10 chr5 191415813 191416007 -8214143 - MIR SINE MIR -57 205 3 239 245 71 10 chr5 191416491 191416605 -8213545 - MIR SINE MIR -62 146 20 * 287 343 83 9 chr5 191416558 191416774 -8213376 + MIR SINE MIR 26 257 -5 318 319 140 0 chr5 191416783 191416940 -8213210 + MER117 DNA MER1_type 1 179 -18 1562 208 140 20 chr5 191417069 191417520 -8212630 - MLT1D LTR MaLR 0 505 1 1922 137 0 0 chr5 191417739 191418056 -8212094 - AluSq SINE Alu 0 359 43 287 333 133 6 chr5 191418175 191418340 -8211810 - MLT1J2 LTR MaLR -5 445 260 3275 202 52 68 chr5 191418833 191419325 -8210825 + L1MD3 LINE L1 5829 5597 -790 2342 101 7 0 chr5 191419325 191419632 -8210518 + AluSp SINE Alu 1 309 -4 3275 202 52 68 chr5 191419632 191420095 -8210055 + L1MD3 LINE L1 5596 6065 -322 3342 201 14 14 chr5 191420099 191420764 -8209386 + L1MC3 LINE L1 7098 7762 -23 2407 92 0 0 chr5 191420806 191421101 -8209049 + AluSg SINE Alu 3 297 -13 423 0 0 0 chr5 191421391 191421438 -8208712 + (CA)n Simple_repeat Simple_repeat 1 47 0 182 320 0 62 chr5 191422472 191422569 -8207581 - MIR SINE MIR 0 262 172 23 0 0 0 chr5 191422699 191422722 -8207428 + GC_rich Low_complexity Low_complexity 1 23 0 985 179 0 0 chr5 191423239 191423401 -8206749 - FRAM SINE Alu -15 161 1 252 361 42 16 chr5 191423979 191424170 -8205980 + L2 LINE L2 2699 2894 -420 368 276 32 49 chr5 191424325 191424510 -8205640 + L2 LINE L2 3132 3313 0 350 280 9 9 chr5 191424580 191424687 -8205463 - MIR SINE MIR -141 121 15 467 229 94 45 chr5 191425616 191425883 -8204267 + L2 LINE L2 3011 3290 -23 799 264 95 16 chr5 191426952 191427267 -8202883 - MER113 DNA MER1_type? -62 459 120 353 198 94 0 chr5 191427416 191427512 -8202638 + MIR3 SINE MIR 66 170 -38 196 179 0 36 chr5 191427629 191427685 -8202465 + CT-rich Low_complexity Low_complexity 4 57 0 254 250 15 98 chr5 191428270 191428402 -8201748 - Charlie8 DNA MER1_type -2212 205 85 192 329 154 13 chr5 191428653 191428802 -8201348 + L2 LINE L2 3101 3270 -2 238 173 19 19 chr5 191429056 191429108 -8201042 + MER103 DNA DNA 46 97 -69 968 142 13 0 chr5 191429342 191429497 -8200653 - L1PA16 LINE L1 0 6166 6010 195 289 0 0 chr5 191429557 191429609 -8200541 - MIR SINE MIR -108 154 103 4956 160 37 72 chr5 191429627 191430400 -8199750 - L1MB4 LINE L1 -6 6174 5375 2217 142 11 3 chr5 191430400 191430752 -8199398 + THE1A LTR MaLR 1 355 0 12494 79 3 0 chr5 191430752 191432327 -8197823 + THE1A-int LTR MaLR 1 1580 0 2070 157 14 6 chr5 191432328 191432679 -8197471 + THE1A LTR MaLR 2 355 0 4956 160 37 72 chr5 191432679 191433314 -8196836 - L1MB4 LINE L1 -803 5377 4824 594 235 195 9 chr5 191433450 191433671 -8196479 - MIR SINE MIR 0 262 1 963 189 149 0 chr5 191433775 191433976 -8196174 - MER45C DNA AcHobo 0 953 723 910 267 69 19 chr5 191433966 191434289 -8195861 - MER45C DNA AcHobo -552 401 13 * 231 224 0 0 chr5 191434342 191434391 -8195759 - L1 LINE L1 -973 5173 5125 242 203 0 14 chr5 191435536 191435610 -8194540 + GA-rich Low_complexity Low_complexity 2 74 0 487 233 170 27 chr5 191435614 191435837 -8194313 - MIR SINE MIR 0 262 8 210 233 0 0 chr5 191435882 191435925 -8194225 + L2 LINE L2 3262 3304 -9 494 269 52 0 chr5 191438069 191438203 -8191947 - MIR SINE MIR -66 196 56 318 235 88 10 chr5 191438899 191439001 -8191149 - L2 LINE L2 -1 3271 3162 259 277 21 71 chr5 191439197 191439302 -8190848 - L2 LINE L2 -618 2696 2598 2212 107 3 7 chr5 191439302 191439612 -8190538 + AluSx SINE Alu 1 312 0 259 277 21 71 chr5 191439612 191439647 -8190503 - L2 LINE L2 -716 2598 2563 306 335 97 34 chr5 191439706 191439882 -8190268 - MIR SINE MIR -52 210 24 287 285 31 69 chr5 191440028 191440057 -8190093 - MIR SINE MIR -59 149 120 1935 123 10 3 chr5 191440057 191440350 -8189800 - L1PB1 LINE L1 -2 6149 5855 287 285 31 69 chr5 191440350 191440450 -8189700 - MIR SINE MIR -88 120 36 181 194 0 0 chr5 191440594 191440625 -8189525 - L2 LINE L2 -31 3282 3252 204 0 26 53 chr5 191440629 191440667 -8189483 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 190 288 163 0 chr5 191440764 191440844 -8189306 - L2 LINE L2 -247 3025 2933 564 280 64 21 chr5 191441178 191441414 -8188736 - MIR SINE MIR -9 253 8 243 250 125 10 chr5 191441688 191441792 -8188358 - L1MC4 LINE L1 -5 8037 7922 473 263 39 14 chr5 191441937 191442126 -8188024 - L1ME2 LINE L1 0 6166 5974 810 270 57 76 chr5 191443213 191443230 -8186920 - Charlie8 DNA MER1_type -65 276 260 285 29 0 0 chr5 191443230 191443264 -8186886 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 810 270 57 76 chr5 191443264 191443645 -8186505 - Charlie8 DNA MER1_type -81 260 128 2017 142 0 10 chr5 191443645 191443947 -8186203 + AluJb SINE Alu 1 299 -13 810 270 57 76 chr5 191443947 191444059 -8186091 - Charlie8 DNA MER1_type -213 128 15 1002 274 136 16 chr5 191444329 191444764 -8185386 + L1MC4a LINE L1 5348 5834 -1974 300 267 44 73 chr5 191444548 191444821 -8185329 + L1MB4 LINE L1 5619 5883 -297 * 542 219 44 62 chr5 191444838 191444998 -8185152 + MER63 DNA MER1_type 2 784 -52 298 262 56 32 chr5 191445028 191445154 -8184996 + L1MC4a LINE L1 5831 5959 -1849 315 85 0 0 chr5 191445194 191445241 -8184909 + (CA)n Simple_repeat Simple_repeat 2 48 0 190 282 77 45 chr5 191445384 191445540 -8184610 - MER5B DNA MER1_type -17 161 1 282 283 76 28 chr5 191448036 191448181 -8181969 - MIR3 SINE MIR -3 205 54 232 264 104 48 chr5 191448266 191448391 -8181759 - MER5B DNA MER1_type -40 138 7 193 200 0 0 chr5 191448689 191448724 -8181426 - MIR SINE MIR -111 151 117 567 146 0 0 chr5 191448960 191449042 -8181108 + AluJ/FLAM SINE Alu 5 86 -226 1271 224 77 13 chr5 191449185 191449577 -8180573 - L1MB8 LINE L1 0 6178 5762 868 260 29 41 chr5 191450221 191450572 -8179578 + MLT1I LTR MaLR 82 405 -4 2225 109 0 13 chr5 191451634 191451937 -8178213 - AluSx SINE Alu -13 299 1 305 222 37 12 chr5 191453496 191453577 -8176573 - MIR3 SINE MIR -7 201 119 529 261 42 80 chr5 191453865 191454152 -8175998 - Charlie8 DNA MER1_type -2141 276 1 182 250 0 0 chr5 191454153 191454193 -8175957 - MIR SINE MIR -64 144 105 201 74 0 0 chr5 191454252 191454279 -8175871 + (TG)n Simple_repeat Simple_repeat 1 27 0 211 154 31 0 chr5 191454279 191454344 -8175806 + GA-rich Low_complexity Low_complexity 2 68 0 310 192 23 6 chr5 191454362 191454539 -8175611 + GA-rich Low_complexity Low_complexity 1 180 0 314 170 30 0 chr5 191454625 191454730 -8175420 + GA-rich Low_complexity Low_complexity 1 112 -27 189 0 0 0 chr5 191454730 191454751 -8175399 + (TG)n Simple_repeat Simple_repeat 1 21 0 314 170 30 0 chr5 191454751 191454780 -8175370 + GA-rich Low_complexity Low_complexity 112 139 0 263 191 27 0 chr5 191454826 191454973 -8175177 + GA-rich Low_complexity Low_complexity 1 151 0 181 159 32 0 chr5 191454990 191455053 -8175097 + GA-rich Low_complexity Low_complexity 1 65 0 234 0 0 0 chr5 191455159 191455185 -8174965 + (TG)n Simple_repeat Simple_repeat 2 27 0 389 274 73 15 chr5 191455379 191455582 -8174568 - MIR3 SINE MIR -31 177 4 291 333 21 0 chr5 191455972 191456068 -8174082 + L2 LINE L2 3158 3255 -17 325 174 47 0 chr5 191456068 191456154 -8173996 + GA-rich Low_complexity Low_complexity 3 92 0 211 241 0 74 chr5 191456340 191456394 -8173756 + MIR SINE MIR 78 127 -81 1136 225 127 6 chr5 191456400 191456784 -8173366 - MLT1D LTR MaLR 0 467 53 2308 90 7 7 chr5 191457389 191457688 -8172462 + AluSq SINE Alu 1 299 -14 229 211 40 26 chr5 191457751 191457827 -8172323 + (TGAA)n Simple_repeat Simple_repeat 1 77 0 703 313 95 31 chr5 191457876 191458362 -8171788 - L2 LINE L2 -77 3236 2725 1116 273 136 0 chr5 191458468 191458842 -8171308 + LTR16A LTR ERVL 18 442 -8 716 224 67 9 chr5 191459573 191459796 -8170354 + MER33 DNA MER1_type 49 284 -40 307 143 0 0 chr5 191459796 191459845 -8170305 + FLAM SINE Alu 78 126 -7 1918 157 20 0 chr5 191459857 191460151 -8169999 + AluJb SINE Alu 1 300 -12 819 200 28 0 chr5 191460332 191460477 -8169673 + FRAM SINE Alu 15 163 -13 359 111 0 16 chr5 191460477 191460540 -8169610 + (GGA)n Simple_repeat Simple_repeat 1 62 0 447 100 0 14 chr5 191460540 191460610 -8169540 + L1MA5 LINE L1 2949 3017 -3129 * 9885 171 40 7 chr5 191460608 191463112 -8167038 + L1MA5 LINE L1 3387 5976 -324 232 123 137 55 chr5 191463113 191463186 -8166964 + L1MA5 LINE L1 5945 6023 -277 224 163 0 0 chr5 191463199 191463242 -8166908 + MIR3 SINE MIR 150 192 -16 1714 152 0 0 chr5 191463272 191463549 -8166601 + L1MA5 LINE L1 6024 6300 0 2129 115 33 3 chr5 191463559 191463863 -8166287 + AluSq SINE Alu 1 313 0 247 333 0 10 chr5 191463905 191464007 -8166143 + L2 LINE L2 3178 3278 -35 244 209 22 11 chr5 191464012 191464103 -8166047 + (CATA)n Simple_repeat Simple_repeat 1 92 0 224 163 0 0 chr5 191464223 191464266 -8165884 + MIR3 SINE MIR 150 192 -16 2243 113 0 3 chr5 191464914 191465214 -8164936 + AluSg SINE Alu 1 299 -11 1602 287 53 6 chr5 191466024 191466529 -8163621 + Zaphod DNA AcHobo 156 684 -3347 2657 36 0 3 chr5 191466582 191466886 -8163264 + AluY SINE Alu 1 303 -8 1791 190 18 0 chr5 191466886 191467218 -8162932 + L1MB3 LINE L1 5805 6142 -41 1981 149 13 0 chr5 191467218 191467578 -8162572 + AluSq SINE Alu 1 364 0 32 43 0 0 chr5 191467617 191467663 -8162487 + AT_rich Low_complexity Low_complexity 1 46 0 368 157 26 89 chr5 191467694 191467885 -8162265 + Zaphod DNA AcHobo 796 974 -3057 351 262 58 0 chr5 191467869 191467972 -8162178 + Zaphod DNA AcHobo 3908 4016 -15 * 275 330 26 71 chr5 191468040 191468307 -8161843 + L2 LINE L2 2932 3186 -86 555 236 8 0 chr5 191468715 191468842 -8161308 - MER94 DNA DNA -1 133 6 594 228 0 0 chr5 191469060 191469309 -8160841 + CT-rich Low_complexity Low_complexity 1 249 0 1737 188 0 16 chr5 191469364 191469667 -8160483 - AluJo SINE Alu -14 298 1 190 176 0 98 chr5 191470777 191470828 -8159322 - MIR SINE MIR -186 76 31 406 202 42 125 chr5 191471422 191471590 -8158560 - MIR SINE MIR -70 192 39 1082 86 17 6 chr5 191472300 191472474 -8157676 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 392 309 51 35 chr5 191472560 191472816 -8157334 + MIR SINE MIR 3 262 0 5602 168 5 2 chr5 191472822 191473767 -8156383 - L1MC1 LINE L1 0 6333 5386 2004 130 27 17 chr5 191473992 191474293 -8155857 - AluSx SINE Alu -8 304 1 254 321 75 30 chr5 191474356 191474490 -8155660 + L2 LINE L2 3118 3257 -15 361 336 13 13 chr5 191475235 191475384 -8154766 + L1M3c LINE L1 2 150 -5991 2539 219 19 13 chr5 191475947 191476572 -8153578 + L1M3c LINE L1 959 1587 -4554 * 27810 89 8 7 chr5 191476565 191482712 -8147438 + L1PA6 LINE L1 11 6149 -5 2863 148 38 37 chr5 191482720 191483540 -8146610 - MER4-int LTR ERV1 -1750 4961 2797 1581 266 13 19 chr5 191483549 191484012 -8146138 + L1M4c LINE L1 1313 1772 -4612 811 115 0 0 chr5 191484030 191484143 -8146007 - AluSg/x SINE Alu -16 296 184 282 152 0 0 chr5 191484322 191484368 -8145782 - MLT1J LTR MaLR -15 552 507 606 310 91 21 chr5 191484666 191484908 -8145242 + MIR SINE MIR 2 260 -2 312 328 34 8 chr5 191484989 191485108 -8145042 - MIR SINE MIR -116 146 25 496 301 16 44 chr5 191485641 191485699 -8144451 - MIR SINE MIR -54 208 150 591 75 0 12 chr5 191485699 191485779 -8144371 - MADE1 DNA Mariner 0 80 2 496 301 16 44 chr5 191485779 191485903 -8144247 - MIR SINE MIR -112 150 31 408 235 80 90 chr5 191486121 191486311 -8143839 + L2 LINE L2 3111 3300 -13 212 0 36 0 chr5 191486311 191486339 -8143811 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 292 195 16 164 chr5 191486707 191486835 -8143315 - MIR3 SINE MIR -14 194 86 2190 182 45 9 chr5 191486835 191487259 -8142891 + MLT1C LTR MaLR 1 439 -28 1006 165 0 12 chr5 191487256 191487426 -8142724 - MLT1B LTR MaLR -222 168 1 * 718 259 146 14 chr5 191488164 191488376 -8141774 - MIR SINE MIR -10 252 13 436 177 0 137 chr5 191488454 191488498 -8141652 + MER45A DNA AcHobo 71 119 -1462 2181 122 0 0 chr5 191488498 191488810 -8141340 - AluSx SINE Alu 0 312 1 436 177 0 137 chr5 191488810 191488889 -8141261 + MER45A DNA AcHobo 119 177 -1 503 297 46 44 chr5 191488908 191488953 -8141197 - MLT1J LTR MaLR -30 481 438 2656 13 0 0 chr5 191488953 191489253 -8140897 - AluYb8 SINE Alu -18 300 1 503 297 46 44 chr5 191489253 191489575 -8140575 - MLT1J LTR MaLR -73 438 68 808 208 129 20 chr5 191489961 191490163 -8139987 + MER58A DNA MER1_type 1 224 0 377 244 103 64 chr5 191490697 191490853 -8139297 + MIR3 SINE MIR 39 200 -8 297 314 138 19 chr5 191491223 191491382 -8138768 + MIR SINE MIR 12 189 -73 2431 194 42 44 chr5 191491403 191491876 -8138274 - MER119 DNA MER1_type -5 578 105 2031 100 27 3 chr5 191491876 191492177 -8137973 + AluSx SINE Alu 1 308 -4 2431 194 42 44 chr5 191492177 191492275 -8137875 - MER119 DNA MER1_type -478 105 8 300 125 0 0 chr5 191493457 191493505 -8136645 - Alu SINE Alu -3 298 251 182 340 214 0 chr5 191493886 191494045 -8136105 + L2 LINE L2 2552 2744 -570 261 170 32 117 chr5 191494362 191494404 -8135746 + L1ME LINE L1 5562 5593 -528 712 233 0 0 chr5 191494404 191494537 -8135613 + AluJo SINE Alu 1 133 -169 261 170 32 117 chr5 191494537 191494588 -8135562 + L1ME LINE L1 5593 5647 -474 182 311 0 16 chr5 191495253 191495314 -8134836 - L2 LINE L2 -86 3186 3127 548 294 57 36 chr5 191495533 191495781 -8134369 - MIR SINE MIR -3 259 7 2139 113 3 0 chr5 191495812 191496114 -8134036 + AluSq SINE Alu 1 303 -10 831 128 0 35 chr5 191496214 191496355 -8133795 - AluSq/x SINE Alu -176 136 1 35 0 0 0 chr5 191496355 191496390 -8133760 + AT_rich Low_complexity Low_complexity 1 35 0 880 142 50 0 chr5 191496397 191496538 -8133612 + AluJo SINE Alu 132 279 -33 2123 103 0 7 chr5 191497660 191497961 -8132189 + AluSx SINE Alu 3 301 -11 21 0 0 0 chr5 191498204 191498225 -8131925 + AT_rich Low_complexity Low_complexity 1 21 0 1947 111 3 21 chr5 191498228 191498517 -8131633 + AluSq SINE Alu 1 284 -29 674 225 6 0 chr5 191498517 191498690 -8131460 + GA-rich Low_complexity Low_complexity 1 174 0 2308 95 0 0 chr5 191500074 191500380 -8129770 + AluSq SINE Alu 1 306 -7 2218 99 3 3 chr5 191500507 191500811 -8129339 + AluSc SINE Alu 1 304 -5 186 328 0 0 chr5 191500973 191501034 -8129116 + MIR SINE MIR 95 155 -107 215 208 0 42 chr5 191502177 191502225 -8127925 - MER5A DNA MER1_type -83 106 61 975 276 57 43 chr5 191502443 191502813 -8127337 - L2 LINE L2 -11 3302 2928 357 222 179 34 chr5 191502814 191502931 -8127219 - MIR SINE MIR -121 141 8 2234 94 0 7 chr5 191503128 191503437 -8126713 - AluSc SINE Alu -2 307 1 398 206 117 22 chr5 191503474 191503605 -8126545 + MIR SINE MIR 54 192 -68 1724 115 6 87 chr5 191503631 191503952 -8126198 - AluSg SINE Alu -15 295 1 851 264 45 12 chr5 191503952 191504194 -8125956 - MIR SINE MIR 0 262 13 3182 222 51 58 chr5 191504438 191504738 -8125412 + L1MC4 LINE L1 6854 7155 -887 1893 137 9 29 chr5 191504738 191505053 -8125097 + AluSx SINE Alu 1 309 -3 3182 222 51 58 chr5 191505053 191505840 -8124310 + L1MC4 LINE L1 7155 7933 -109 1188 116 79 17 chr5 191505859 191506100 -8124050 - L1MA8 LINE L1 -4 6287 6032 3389 247 43 37 chr5 191506238 191506397 -8123753 - L1M4 LINE L1 -2144 4002 3845 1857 136 4 0 chr5 191506397 191506699 -8123451 - AluSg SINE Alu 0 303 1 3389 247 43 37 chr5 191506699 191507599 -8122551 - L1M4 LINE L1 -2301 3845 2930 1910 97 32 23 chr5 191507599 191507908 -8122242 + AluSx SINE Alu 1 312 0 3389 247 43 37 chr5 191507908 191508149 -8122001 - L1M4 LINE L1 -3216 2930 2692 684 254 22 16 chr5 191508149 191508334 -8121816 + MIR SINE MIR 77 262 0 671 293 71 57 chr5 191508427 191508987 -8121163 + L2 LINE L2 2701 3271 -1 325 249 34 9 chr5 191509005 191509131 -8121019 + MIR SINE MIR 77 208 -54 2149 95 3 7 chr5 191509402 191509706 -8120444 + AluSg1 SINE Alu 1 303 -6 2122 91 3 3 chr5 191510044 191510330 -8119820 + AluSq SINE Alu 23 308 -5 266 252 88 61 chr5 191511308 191511455 -8118695 + MIR3 SINE MIR 9 159 -49 811 271 18 39 chr5 191511467 191511530 -8118620 + Charlie8 DNA MER1_type 12 75 -266 2205 79 0 0 chr5 191511530 191511828 -8118322 - AluSc SINE Alu 0 298 1 811 271 18 39 chr5 191511828 191512043 -8118107 + Charlie8 DNA MER1_type 75 285 -56 2137 116 0 0 chr5 191512084 191512387 -8117763 - AluSq SINE Alu -10 303 1 201 247 101 56 chr5 191512418 191512507 -8117643 - L2 LINE L2 -25 3247 3155 400 270 108 40 chr5 191512519 191512667 -8117483 + MER5A DNA MER1_type 1 158 -31 776 294 54 0 chr5 191512779 191513000 -8117150 - MIR SINE MIR -6 256 24 405 280 23 40 chr5 191513797 191513903 -8116247 + MIR3 SINE MIR 46 152 -56 2401 59 3 3 chr5 191513903 191514208 -8115942 - AluY SINE Alu -6 305 1 405 280 23 40 chr5 191514208 191514259 -8115891 + MIR3 SINE MIR 152 202 -6 229 250 0 0 chr5 191514279 191514323 -8115827 + polypurine Low_complexity Low_complexity 2 45 0 2403 175 7 46 chr5 191515124 191515582 -8114568 + MLT1C LTR MaLR 28 467 0 324 0 0 0 chr5 191515884 191515920 -8114230 + (T)n Simple_repeat Simple_repeat 1 36 0 2598 212 62 19 chr5 191516106 191516671 -8113479 - MLT1E LTR MaLR 0 593 5 810 296 129 6 chr5 191516704 191517069 -8113081 + MLT1L LTR MaLR 104 513 -102 2102 125 0 3 chr5 191517115 191517428 -8112722 - AluSx SINE Alu 0 312 1 289 280 121 0 chr5 191517831 191517963 -8112187 - MIR SINE MIR -6 256 109 311 44 22 0 chr5 191518310 191518355 -8111795 + (TG)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr5 191518415 191518436 -8111714 + AT_rich Low_complexity Low_complexity 1 21 0 753 286 48 51 chr5 191518637 191518757 -8111393 - L1MC/D LINE L1 -2001 5807 5688 1915 119 13 10 chr5 191518757 191519059 -8111091 - AluSx SINE Alu -2 310 8 753 286 48 51 chr5 191519059 191519350 -8110800 - L1MC/D LINE L1 -2120 5688 5397 615 275 32 16 chr5 191519844 191520033 -8110117 - MIR SINE MIR -52 210 19 608 264 6 31 chr5 191520902 191521065 -8109085 - MIR SINE MIR -48 214 56 233 174 0 72 chr5 191521177 191521246 -8108904 + CT-rich Low_complexity Low_complexity 1 64 0 220 299 13 26 chr5 191521720 191521797 -8108353 + L2 LINE L2 3220 3295 -18 474 240 131 6 chr5 191522948 191523123 -8107027 - MIR SINE MIR -26 236 40 297 174 29 72 chr5 191523273 191523342 -8106808 - MIR SINE MIR -55 153 88 2021 108 27 7 chr5 191523632 191523951 -8106199 + AluSx SINE Alu 1 312 0 2172 92 0 0 chr5 191524594 191524900 -8105250 + AluSg SINE Alu 1 306 0 521 279 166 40 chr5 191525637 191525963 -8104187 - L2 LINE L2 0 3313 2947 306 276 172 9 chr5 191526153 191526269 -8103881 - MIR SINE MIR -79 183 49 611 273 52 67 chr5 191526331 191526675 -8103475 + MER102b DNA MER1_type 1 339 -2 479 299 113 13 chr5 191526841 191527045 -8103105 + MIR SINE MIR 31 250 -12 751 172 0 0 chr5 191527562 191527696 -8102454 + FRAM SINE Alu 41 174 -2 218 266 105 32 chr5 191528351 191528475 -8101675 - MIR SINE MIR -58 150 18 215 312 21 0 chr5 191529169 191529310 -8100840 + (CA)n Simple_repeat Simple_repeat 1 144 0 2055 104 0 45 chr5 191529868 191529879 -8100271 - AluSx SINE Alu -18 294 284 343 0 0 0 chr5 191529879 191529917 -8100233 + (TTTA)n Simple_repeat Simple_repeat 3 152 0 2055 104 0 45 chr5 191529917 191530213 -8099937 - AluSx SINE Alu -28 284 1 2292 61 40 0 chr5 191530323 191530620 -8099530 - AluY SINE Alu -2 309 1 736 312 137 24 chr5 191530711 191531334 -8098816 - L2 LINE L2 0 3313 2615 2201 41 0 4 chr5 191531336 191531606 -8098544 + AluY SINE Alu 2 270 -41 971 97 0 0 chr5 191531923 191532047 -8098103 + FLAM_C SINE Alu 1 124 -9 320 331 25 8 chr5 191532170 191532291 -8097859 + MIR SINE MIR 125 247 -15 2262 94 3 0 chr5 191532334 191532641 -8097509 - AluSq SINE Alu -5 308 1 1031 68 0 14 chr5 191532782 191532928 -8097222 + (TTTTC)n Simple_repeat Simple_repeat 1 144 0 265 280 130 10 chr5 191533117 191533217 -8096933 - MLT1L LTR MaLR -158 457 346 2173 120 0 0 chr5 191533237 191533545 -8096605 - AluSc SINE Alu -1 308 1 348 248 90 117 chr5 191533546 191533766 -8096384 - MLT1L LTR MaLR -254 361 148 837 196 7 0 chr5 191533766 191533909 -8096241 - MER58B DNA MER1_type 0 341 198 959 167 8 2 chr5 191533973 191534226 -8095924 + AluJb SINE Alu 2 312 0 898 140 21 0 chr5 191535102 191535245 -8094905 - MER5A DNA MER1_type -43 146 1 2609 177 104 14 chr5 191535542 191536062 -8094088 + MLT1F1 LTR MaLR 1 567 0 1009 32 0 0 chr5 191536177 191536300 -8093850 + AluY SINE Alu 181 303 -8 316 294 90 61 chr5 191537497 191537742 -8092408 + MIR SINE MIR 11 262 0 2234 99 0 0 chr5 191537964 191538266 -8091884 - AluY SINE Alu -9 302 1 1186 144 0 0 chr5 191538467 191538648 -8091502 - AluSg/x SINE Alu -5 307 127 2349 97 0 0 chr5 191538990 191539299 -8090851 - AluSg SINE Alu -1 309 1 337 218 35 23 chr5 191539300 191539387 -8090763 - Charlie8 DNA MER1_type -2284 133 46 217 347 102 0 chr5 191539457 191539555 -8090595 + L2 LINE L2 3129 3236 -36 1858 164 0 0 chr5 191539699 191540011 -8090139 - AluSx SINE Alu 0 312 1 1613 167 7 10 chr5 191540038 191540338 -8089812 - AluJo SINE Alu -13 299 1 442 296 13 20 chr5 191540682 191540834 -8089316 - MIR SINE MIR -64 198 48 388 235 136 24 chr5 191540927 191541140 -8089010 + MER113 DNA MER1_type? 38 274 -247 1376 113 0 5 chr5 191541302 191541519 -8088631 + AluSq SINE Alu 89 304 0 293 299 0 21 chr5 191541545 191541642 -8088508 + MER113 DNA MER1_type? 384 478 -43 380 304 55 39 chr5 191541884 191542065 -8088085 - MIR SINE MIR -44 218 35 321 301 48 34 chr5 191542150 191542296 -8087854 - MIR3 SINE MIR -10 198 51 453 274 32 24 chr5 191542747 191542871 -8087279 + MIR SINE MIR 138 262 0 1976 99 3 31 chr5 191543033 191543363 -8086787 - AluSq SINE Alu 0 322 1 299 289 97 9 chr5 191543436 191543550 -8086600 + MIR SINE MIR 32 155 -107 331 232 74 21 chr5 191543782 191543877 -8086273 - L2 LINE L2 0 3313 3214 180 258 11 108 chr5 191543993 191544086 -8086064 + MIR SINE MIR 67 150 -58 415 369 21 0 chr5 191544938 191545079 -8085071 + MIR SINE MIR 1 144 -118 274 235 39 39 chr5 191546969 191547071 -8083079 - L2 LINE L2 -198 3115 3014 184 274 48 0 chr5 191547075 191547137 -8083013 + L2 LINE L2 3249 3313 0 948 215 134 7 chr5 191547414 191547712 -8082438 - Charlie4a DNA MER1_type -2 506 171 1923 181 128 33 chr5 191547714 191548117 -8082033 + MLT1D LTR MaLR 3 366 -139 2122 123 0 0 chr5 191548117 191548425 -8081725 - AluSx SINE Alu -4 308 1 195 42 0 0 chr5 191548428 191548452 -8081698 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1923 181 128 33 chr5 191548452 191548503 -8081647 + MLT1D LTR MaLR 367 505 0 2749 197 34 58 chr5 191548503 191549179 -8080971 + MLT1D-int LTR MaLR 1 660 -711 1209 253 57 100 chr5 191549232 191549742 -8080408 + MLT1D-int LTR MaLR 661 1148 -223 386 267 57 0 chr5 191549859 191549964 -8080186 - MER81 DNA DNA -3 111 1 377 144 93 21 chr5 191549964 191550061 -8080089 - MER58B DNA MER1_type -151 190 87 600 163 0 10 chr5 191550063 191550161 -8079989 - Tigger7 DNA MER2_type 0 2487 2391 1464 193 19 15 chr5 191550163 191550427 -8079723 - Tigger7 DNA MER2_type -2222 265 1 476 193 0 12 chr5 191550434 191550517 -8079633 - MER58B DNA MER1_type -259 82 1 376 244 260 0 chr5 191550517 191550638 -8079512 - MLT1L LTR MaLR -460 155 3 187 217 22 22 chr5 191550839 191550885 -8079265 + MIR SINE MIR 85 130 -78 221 254 0 60 chr5 191553522 191553589 -8076561 + MIR3 SINE MIR 109 171 -37 215 232 0 71 chr5 191554629 191554685 -8075465 - L2 LINE L2 0 3313 3262 1470 137 0 25 chr5 191554802 191555043 -8075107 + AluSx SINE Alu 1 235 -77 448 133 27 0 chr5 191555150 191555225 -8074925 + AluSx SINE Alu 226 302 -7 189 294 111 40 chr5 191555234 191555360 -8074790 + MIR SINE MIR 19 153 -109 505 65 0 0 chr5 191555360 191555422 -8074728 + AluSg/x SINE Alu 157 218 -94 189 346 30 10 chr5 191555571 191555672 -8074478 + MIR SINE MIR 103 205 -57 581 183 51 69 chr5 191555720 191555895 -8074255 - AluSg/x SINE Alu -18 294 123 426 304 134 15 chr5 191556177 191556378 -8073772 - MIR SINE MIR -27 235 11 347 171 37 24 chr5 191556611 191556693 -8073457 + MER53 DNA DNA 8 90 -99 331 286 84 103 chr5 191557122 191557195 -8072955 - L2 LINE L2 -356 2958 2885 2343 77 3 0 chr5 191557195 191557495 -8072655 + AluSp SINE Alu 3 303 -10 331 286 84 103 chr5 191557495 191557683 -8072467 - L2 LINE L2 -429 2885 2702 2018 82 4 0 chr5 191557999 191558268 -8071882 + AluY SINE Alu 1 270 -41 328 259 0 52 chr5 191558482 191558598 -8071552 + MER5C DNA MER1_type 214 323 -1 285 333 21 0 chr5 191558780 191558876 -8071274 + MIR SINE MIR 162 259 -3 295 289 33 0 chr5 191559209 191559299 -8070851 + MIR SINE MIR 120 212 -50 2361 86 0 0 chr5 191559374 191559678 -8070472 + AluY SINE Alu 1 304 -7 320 266 32 0 chr5 191560458 191560552 -8069598 + L2 LINE L2 2941 3037 -276 763 128 30 12 chr5 191560556 191560720 -8069430 + CT-rich Low_complexity Low_complexity 1 167 0 1995 118 6 37 chr5 191560720 191560899 -8069251 - AluSq SINE Alu 0 313 147 1804 100 9 120 chr5 191560899 191561248 -8068902 - AluSg SINE Alu 0 310 1 1995 118 6 37 chr5 191561248 191561391 -8068759 - AluSq SINE Alu -166 147 1 298 214 13 19 chr5 191561449 191561603 -8068547 + (CA)n Simple_repeat Simple_repeat 2 154 0 493 245 167 51 chr5 191561611 191561827 -8068323 + L2 LINE L2 3073 3313 0 189 0 0 0 chr5 191561827 191561848 -8068302 + (TGGG)n Simple_repeat Simple_repeat 3 23 0 717 212 0 0 chr5 191561875 191562140 -8068010 + (TGGG)n Simple_repeat Simple_repeat 1 265 0 284 336 19 0 chr5 191562644 191562748 -8067402 - MIR SINE MIR -70 138 33 324 272 217 22 chr5 191562881 191563061 -8067089 + MIR SINE MIR 28 242 -20 1882 107 42 0 chr5 191563061 191563350 -8066800 + AluJb SINE Alu 1 301 -11 25 0 0 0 chr5 191563904 191563929 -8066221 + AT_rich Low_complexity Low_complexity 1 25 0 2105 109 0 10 chr5 191565060 191565363 -8064787 - AluSq SINE Alu -13 300 1 683 231 39 67 chr5 191565423 191565705 -8064445 - L1MC5 LINE L1 -48 7913 7640 399 176 0 0 chr5 191565826 191565842 -8064308 + MER116 DNA Mariner 7 22 -58 1835 154 3 0 chr5 191565842 191566134 -8064016 + AluSx SINE Alu 1 293 -19 399 176 0 0 chr5 191566134 191566191 -8063959 + MER116 DNA Mariner 21 80 0 347 340 99 41 chr5 191566358 191566776 -8063374 + L2 LINE L2 2628 3084 -188 1521 77 16 0 chr5 191566982 191567176 -8062974 - MER107 DNA MER1_type 0 197 1 2083 119 7 0 chr5 191567439 191567749 -8062401 - AluSx SINE Alu 0 312 1 290 219 95 25 chr5 191567771 191567892 -8062258 + L1P3 LINE L1 5705 5833 -298 26 0 0 0 chr5 191567950 191567976 -8062174 + AT_rich Low_complexity Low_complexity 1 26 0 291 250 162 55 chr5 191568108 191568208 -8061942 - L1ME4a LINE L1 -15 6106 6018 2232 97 0 0 chr5 191568208 191568507 -8061643 - AluY SINE Alu -12 299 1 291 250 162 55 chr5 191568507 191568678 -8061472 - L1ME4a LINE L1 -103 6018 5806 193 235 0 0 chr5 191569787 191569821 -8060329 - L2 LINE L2 -17 3255 3222 618 271 6 18 chr5 191570109 191570275 -8059875 + MER5A DNA MER1_type 26 189 0 381 289 48 59 chr5 191570553 191570691 -8059459 + L1MB1 LINE L1 5476 5613 -508 2088 110 0 7 chr5 191570691 191570983 -8059167 + AluSx SINE Alu 1 290 -22 381 289 48 59 chr5 191570983 191571031 -8059119 + L1MB1 LINE L1 5613 5660 -461 1376 182 0 27 chr5 191571153 191571411 -8058739 + AluJo SINE Alu 1 251 -61 1348 89 0 0 chr5 191571648 191571827 -8058323 - AluSg SINE Alu -131 179 1 2180 96 3 0 chr5 191572217 191572520 -8057630 + AluSx SINE Alu 1 304 -8 2223 88 0 10 chr5 191572532 191572838 -8057312 + AluY SINE Alu 1 303 -8 265 256 12 77 chr5 191572884 191572906 -8057244 - L1MA10 LINE L1 -3 6331 6310 1189 235 76 52 chr5 191572906 191573353 -8056797 - L1ME2 LINE L1 -14 6150 5693 1559 141 86 14 chr5 191573359 191573649 -8056501 + L1MB1 LINE L1 5789 6099 -69 2105 171 22 31 chr5 191573673 191573868 -8056282 + L1MB8 LINE L1 5725 5920 -258 288 0 0 0 chr5 191573868 191573900 -8056250 + (TA)n Simple_repeat Simple_repeat 2 33 0 2105 171 22 31 chr5 191573900 191574160 -8055990 + L1MB8 LINE L1 5920 6176 -2 713 253 87 31 chr5 191574170 191574399 -8055751 - L1ME2 LINE L1 -471 5699 5458 1840 109 53 0 chr5 191574417 191574700 -8055450 + AluSx SINE Alu 1 298 -14 245 242 96 51 chr5 191574839 191574855 -8055295 - L1MA10 LINE L1 -2 6332 6317 2451 202 52 79 chr5 191574855 191575179 -8054971 - L1ME2 LINE L1 -9 6155 5824 2275 80 3 0 chr5 191575179 191575479 -8054671 - AluSx SINE Alu -7 305 5 2451 202 52 79 chr5 191575479 191576185 -8053965 - L1ME2 LINE L1 -340 5824 5157 395 260 21 10 chr5 191576297 191576393 -8053757 - MIR3 SINE MIR -54 154 58 444 252 71 8 chr5 191577294 191577421 -8052729 - MIR3 SINE MIR -62 146 12 1840 96 100 0 chr5 191577908 191578178 -8051972 + AluSx SINE Alu 1 297 -15 211 224 0 0 chr5 191578185 191578234 -8051916 + A-rich Low_complexity Low_complexity 3 51 0 380 229 0 12 chr5 191578403 191578486 -8051664 - MIR SINE MIR -71 191 110 2096 119 0 0 chr5 191579324 191579656 -8050494 - AluSg SINE Alu 0 310 1 431 35 18 0 chr5 191580453 191580510 -8049640 + (CA)n Simple_repeat Simple_repeat 2 59 0 220 212 76 15 chr5 191580853 191580919 -8049231 - MIR SINE MIR -114 148 79 293 291 95 61 chr5 191581803 191581951 -8048199 - MIR SINE MIR -13 249 97 22 0 0 0 chr5 191582022 191582044 -8048106 + AT_rich Low_complexity Low_complexity 1 22 0 248 111 22 0 chr5 191582112 191582157 -8047993 + GA-rich Low_complexity Low_complexity 1 46 0 256 318 120 37 chr5 191582225 191582674 -8047476 - L2 LINE L2 -69 3244 2723 459 289 45 41 chr5 191582907 191583153 -8046997 - MER102b DNA MER1_type -11 330 84 1257 229 76 53 chr5 191583326 191583516 -8046634 - Charlie4a DNA MER1_type -1459 502 318 1666 174 0 10 chr5 191583516 191583820 -8046330 + AluJb SINE Alu 4 304 -8 1257 229 76 53 chr5 191583820 191583898 -8046252 - Charlie4a DNA MER1_type -1643 318 243 2047 104 3 32 chr5 191583898 191584206 -8045944 + AluSp SINE Alu 1 299 -14 1257 229 76 53 chr5 191584206 191584386 -8045764 - Charlie4a DNA MER1_type -1718 243 43 314 333 162 34 chr5 191584730 191584895 -8045255 + MIR SINE MIR 15 212 -50 2193 97 0 19 chr5 191584895 191585206 -8044944 - AluSx SINE Alu -6 306 2 314 333 162 34 chr5 191585206 191585244 -8044906 + MIR SINE MIR 212 244 -18 291 261 14 0 chr5 191585351 191585420 -8044730 + L2 LINE L2 2999 3068 -245 267 258 15 15 chr5 191585903 191585969 -8044181 - Charlie8 DNA MER1_type -1003 1414 1349 790 271 4 45 chr5 191586053 191586297 -8043853 - Charlie8 DNA MER1_type -2182 235 2 425 324 35 52 chr5 191586302 191586509 -8043641 - L2 LINE L2 -522 2792 2590 2207 98 0 3 chr5 191586509 191586804 -8043346 + AluSp SINE Alu 1 294 -19 425 324 35 52 chr5 191586804 191586883 -8043267 - L2 LINE L2 -724 2590 2511 292 286 171 9 chr5 191586902 191587007 -8043143 + L2 LINE L2 3185 3306 -7 186 345 48 12 chr5 191587517 191587601 -8042549 - L2 LINE L2 -1 3271 3185 302 312 65 0 chr5 191587700 191587793 -8042357 - MIR SINE MIR -83 179 81 1646 143 26 4 chr5 191589168 191589433 -8040717 + AluJo SINE Alu 10 280 -32 198 91 0 0 chr5 191589433 191589466 -8040684 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 269 186 0 0 chr5 191590699 191590742 -8039408 - L2 LINE L2 -11 3261 3219 1577 118 51 51 chr5 191591013 191591289 -8038861 - L1PB1 LINE L1 -1 6150 5871 2137 96 0 0 chr5 191591289 191591604 -8038546 + AluSg SINE Alu 1 315 0 1577 118 51 51 chr5 191591604 191591641 -8038509 - L1PB1 LINE L1 -279 5872 5836 468 92 0 0 chr5 191591660 191591725 -8038425 + AluSp/q SINE Alu 238 302 -11 456 224 84 56 chr5 191591920 191592099 -8038051 + MLT1K LTR MaLR 391 574 -14 2385 48 27 0 chr5 191592203 191592498 -8037652 + AluY SINE Alu 1 303 -8 400 307 101 16 chr5 191592527 191592716 -8037434 + MIR SINE MIR 16 220 -42 2330 70 3 3 chr5 191592721 191593020 -8037130 + AluSp SINE Alu 1 299 -14 1008 83 7 21 chr5 191593151 191593296 -8036854 + AluSq/x SINE Alu 1 143 -170 486 98 0 0 chr5 191593296 191593357 -8036793 + Alu SINE Alu 229 289 -21 352 335 119 11 chr5 191593365 191593625 -8036525 - L1MC4a LINE L1 -1883 5925 5638 1664 188 143 29 chr5 191594267 191594720 -8035430 + MLT1D LTR MaLR 1 505 0 441 296 85 58 chr5 191595369 191595990 -8034160 - L1ME4a LINE L1 -81 6040 5403 2190 92 0 0 chr5 191596134 191596428 -8033722 - AluSg1 SINE Alu -15 294 1 473 259 86 7 chr5 191596473 191596612 -8033538 + MIR SINE MIR 1 150 -112 1863 159 0 6 chr5 191596637 191596987 -8033163 - AluJb SINE Alu 0 348 1 250 319 92 43 chr5 191597558 191597754 -8032396 + MIR SINE MIR 10 211 -51 910 230 34 39 chr5 191597933 191598137 -8032013 + MIR SINE MIR 59 261 -1 195 366 35 14 chr5 191598171 191598313 -8031837 + L2 LINE L2 2906 3050 -222 566 270 92 6 chr5 191598336 191598510 -8031640 + MIR SINE MIR 58 246 -16 343 309 55 42 chr5 191598531 191598662 -8031488 + L2 LINE L2 3099 3235 -37 1896 143 0 0 chr5 191598662 191598983 -8031167 - AluJb SINE Alu 0 321 1 343 309 55 42 chr5 191598983 191599015 -8031135 + L2 LINE L2 3235 3265 -7 436 245 108 7 chr5 191599098 191599237 -8030913 + MIR SINE MIR 49 201 -61 1272 64 0 0 chr5 191599241 191599397 -8030753 + AluY SINE Alu 1 156 -155 544 275 64 0 chr5 191599757 191599928 -8030222 - MIR SINE MIR -34 228 47 742 155 7 7 chr5 191600109 191600264 -8029886 + (TG)n Simple_repeat Simple_repeat 1 155 0 2255 99 0 0 chr5 191600791 191601094 -8029056 + AluSc SINE Alu 2 304 -5 25 31 0 0 chr5 191601988 191602020 -8028130 + AT_rich Low_complexity Low_complexity 1 32 0 1768 166 7 0 chr5 191602041 191602337 -8027813 - AluSx SINE Alu -14 298 1 475 159 23 0 chr5 191602371 191602459 -8027691 + L1MA8 LINE L1 6196 6285 -6 624 191 124 49 chr5 191602522 191602627 -8027523 - Charlie4 DNA MER1_type -1681 280 184 2095 101 23 10 chr5 191602627 191602934 -8027216 + AluSp SINE Alu 1 311 -2 624 191 124 49 chr5 191602934 191603053 -8027097 - Charlie4 DNA MER1_type -1777 184 39 384 270 165 0 chr5 191603177 191603292 -8026858 + MIR SINE MIR 41 174 -88 252 252 63 98 chr5 191603323 191603466 -8026684 - MIR SINE MIR -44 218 81 731 188 0 15 chr5 191603537 191603670 -8026480 + FLAM_C SINE Alu 3 133 0 2347 135 33 104 chr5 191603879 191604010 -8026140 - MER44D DNA MER2_type -1882 605 466 5575 48 5 3 chr5 191604010 191604680 -8025470 + L1PA6 LINE L1 5484 6154 0 2347 135 33 104 chr5 191604680 191605138 -8025012 - MER44D DNA MER2_type -2021 466 2 940 301 85 19 chr5 191605278 191605643 -8024507 + MLT1K LTR MaLR 198 586 -2 1138 89 6 13 chr5 191606671 191606828 -8023322 - LTR12 LTR ERV1 -558 156 1 440 196 0 45 chr5 191606916 191607028 -8023122 + L1M4 LINE L1 4715 4821 -1325 496 184 26 19 chr5 191607669 191607823 -8022327 - MIR SINE MIR -44 218 63 396 0 0 0 chr5 191607872 191607916 -8022234 + (TG)n Simple_repeat Simple_repeat 2 45 0 2201 94 0 3 chr5 191607917 191608214 -8021936 - AluSc SINE Alu -13 296 1 1802 121 3 85 chr5 191608526 191608866 -8021284 - AluSx SINE Alu 0 312 1 1418 234 144 28 chr5 191608880 191609304 -8020846 + MLT1J LTR MaLR 37 509 -2 503 292 73 42 chr5 191609774 191610034 -8020116 + MER102a DNA MER1_type 62 329 -1 7219 105 16 14 chr5 191610135 191611503 -8018647 + L1MA2 LINE L1 4937 6304 0 1579 158 0 64 chr5 191611517 191611815 -8018335 + AluJo SINE Alu 3 281 -31 36 0 0 0 chr5 191611831 191611867 -8018283 + AT_rich Low_complexity Low_complexity 1 36 0 673 306 94 19 chr5 191612180 191612553 -8017597 - MLT1I LTR MaLR 0 409 9 1493 165 107 49 chr5 191612558 191612903 -8017247 + MLT1A1 LTR MaLR 1 365 0 188 317 34 108 chr5 191612919 191613298 -8016852 + L2 LINE L2 2815 3165 -107 451 284 173 24 chr5 191613372 191613580 -8016570 - MER102a DNA MER1_type -3 327 89 654 260 96 32 chr5 191613639 191613858 -8016292 + MIR SINE MIR 28 260 -2 287 143 0 18 chr5 191614984 191615040 -8015110 + (GGGA)n Simple_repeat Simple_repeat 1 55 0 624 280 5 10 chr5 191615126 191615333 -8014817 - L1ME4a LINE L1 -210 5911 5706 618 173 37 56 chr5 191615430 191615647 -8014503 + MER106B DNA MER1_type 1 1040 -19 294 211 44 61 chr5 191616200 191616314 -8013836 - MIR SINE MIR -47 215 104 2127 110 3 10 chr5 191616462 191616771 -8013379 - AluSp SINE Alu -6 307 1 244 275 0 14 chr5 191616839 191616908 -8013242 - MIR SINE MIR -155 107 40 366 23 0 0 chr5 191616956 191616999 -8013151 + (CA)n Simple_repeat Simple_repeat 2 44 0 274 302 10 10 chr5 191618168 191618264 -8011886 + L1MC4a LINE L1 5798 5893 -1915 2144 95 0 17 chr5 191618286 191618581 -8011569 - AluSc SINE Alu -13 296 7 278 365 29 36 chr5 191618950 191619087 -8011063 + L2 LINE L2 3159 3294 -19 188 229 42 42 chr5 191619112 191619160 -8010990 - MIR SINE MIR -95 113 66 235 245 66 104 chr5 191619179 191619285 -8010865 - L2 LINE L2 -10 3303 3202 1842 216 25 45 chr5 191619312 191619608 -8010542 + MER110 LTR ERV1 50 335 -156 2271 89 0 10 chr5 191619608 191619910 -8010240 - AluSq SINE Alu -14 299 1 1842 216 25 45 chr5 191619910 191620062 -8010088 + MER110 LTR ERV1 335 489 -2 267 333 58 8 chr5 191620357 191620477 -8009673 - L2 LINE L2 -468 2846 2721 888 258 22 15 chr5 191620477 191620745 -8009405 - LTR37B LTR ERV1 0 468 199 417 280 64 0 chr5 191620793 191620918 -8009232 + LTR16A LTR ERVL 310 442 -8 377 217 130 49 chr5 191620931 191621115 -8009035 - LTR37B LTR ERV1 -255 213 15 1937 109 3 48 chr5 191621116 191621427 -8008723 - AluSx SINE Alu -11 301 5 312 296 73 67 chr5 191621720 191621759 -8008391 + L1ME4a LINE L1 5671 5708 -413 2471 57 0 0 chr5 191621759 191622059 -8008091 - AluY SINE Alu -11 300 1 312 296 73 67 chr5 191622059 191622455 -8007695 + L1ME4a LINE L1 5708 6109 -12 * 1147 183 75 39 chr5 191622448 191622727 -8007423 - L1MB7 LINE L1 0 6420 6132 1400 197 4 8 chr5 191622727 191622991 -8007159 + AluJo SINE Alu 1 263 -49 292 152 0 0 chr5 191622991 191623037 -8007113 + AluJo SINE Alu 240 285 -17 6321 213 48 24 chr5 191623043 191623947 -8006203 - L1MB7 LINE L1 -269 6141 5260 2157 88 17 0 chr5 191623947 191624241 -8005909 - AluSg SINE Alu -11 299 1 6321 213 48 24 chr5 191624241 191625470 -8004680 - L1MB7 LINE L1 -1150 5260 3959 2983 217 93 73 chr5 191625475 191625729 -8004421 - L1MB7 LINE L1 -2829 3553 3305 2069 123 0 3 chr5 191625729 191626029 -8004121 + AluSg SINE Alu 1 299 -11 2983 217 93 73 chr5 191626029 191627540 -8002610 - L1MB7 LINE L1 -3077 3305 1825 1882 147 3 13 chr5 191627540 191627847 -8002303 - AluSx SINE Alu 0 312 9 289 148 11 0 chr5 191627847 191627900 -8002250 - Alu SINE Alu -264 39 1 2983 217 93 73 chr5 191627900 191628471 -8001679 - L1MB7 LINE L1 -4556 1826 1097 183 247 82 52 chr5 191628822 191628919 -8001231 + MIR SINE MIR 82 181 -81 213 294 144 46 chr5 191628975 191629128 -8001022 + MIR SINE MIR 25 192 -70 219 253 126 35 chr5 191629554 191629641 -8000509 - MIR SINE MIR -92 170 76 286 294 59 0 chr5 191629782 191629899 -8000251 - MIR3 SINE MIR -50 158 32 250 305 49 12 chr5 191630002 191630084 -8000066 - MIR SINE MIR -71 191 107 181 262 0 0 chr5 191630349 191630391 -7999759 + MIR SINE MIR 108 149 -113 201 273 18 0 chr5 191630697 191630752 -7999398 - MIR SINE MIR -76 132 77 37 39 0 0 chr5 191631014 191631065 -7999085 + GC_rich Low_complexity Low_complexity 1 51 0 320 274 32 0 chr5 191631411 191631506 -7998644 + MIR SINE MIR 56 153 -109 199 152 0 0 chr5 191631661 191631694 -7998456 - L2 LINE L2 -12 3260 3228 190 273 0 0 chr5 191631694 191631705 -7998445 - MIR SINE MIR -6 256 213 289 282 60 74 chr5 191631898 191632047 -7998103 - MIR SINE MIR -46 216 70 198 0 0 0 chr5 191634338 191634360 -7995790 + (A)n Simple_repeat Simple_repeat 1 22 0 215 252 24 110 chr5 191635748 191635875 -7994275 - MIR SINE MIR -78 184 69 180 0 0 0 chr5 191636511 191636531 -7993619 + (A)n Simple_repeat Simple_repeat 1 20 0 376 71 0 0 chr5 191636938 191636994 -7993156 + L1PA8 LINE L1 6116 6171 -1 288 77 0 0 chr5 191638892 191638931 -7991219 + (TG)n Simple_repeat Simple_repeat 2 40 0 35 41 0 0 chr5 191639756 191639805 -7990345 + AT_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr5 191642807 191642830 -7987320 + GC_rich Low_complexity Low_complexity 1 23 0 381 234 148 0 chr5 191642834 191642962 -7987188 - MIR SINE MIR -70 192 46 21 0 0 0 chr5 191643917 191643938 -7986212 + AT_rich Low_complexity Low_complexity 1 21 0 321 341 0 23 chr5 191644879 191645052 -7985098 + T-rich Low_complexity Low_complexity 5 173 0 22 0 0 0 chr5 191645650 191645672 -7984478 + GC_rich Low_complexity Low_complexity 1 22 0 319 342 22 62 chr5 191645837 191646109 -7984041 - MIR SINE MIR 0 262 2 237 323 30 20 chr5 191646173 191646272 -7983878 - MIR SINE MIR -35 227 128 192 309 74 51 chr5 191646370 191646545 -7983605 - MIR SINE MIR -51 211 33 386 282 133 6 chr5 191646753 191646934 -7983216 - MIR SINE MIR -30 232 29 270 0 0 0 chr5 191646975 191647005 -7983145 + (TG)n Simple_repeat Simple_repeat 2 31 0 477 283 101 40 chr5 191648212 191648410 -7981740 - MIR SINE MIR -1 261 52 2135 124 3 29 chr5 191648560 191648874 -7981276 + AluSx SINE Alu 1 306 -6 236 196 54 18 chr5 191648993 191649049 -7981101 - MIR SINE MIR -86 122 65 2141 86 7 27 chr5 191649335 191649636 -7980514 - AluSg SINE Alu -15 295 1 390 274 8 43 chr5 191649981 191650098 -7980052 + L2 LINE L2 3200 3312 -1 2148 89 0 50 chr5 191650792 191651094 -7979056 - AluSg SINE Alu -23 287 1 23 0 0 29 chr5 191651921 191651935 -7978215 + AT_rich Low_complexity Low_complexity 1 14 -19 2282 82 6 19 chr5 191651935 191652250 -7977900 - AluY SINE Alu 0 311 1 23 0 0 29 chr5 191652250 191652269 -7977881 + AT_rich Low_complexity Low_complexity 14 33 0 2277 66 0 0 chr5 191652344 191652615 -7977535 - AluY SINE Alu -7 304 34 22 0 0 0 chr5 191652721 191652743 -7977407 + GC_rich Low_complexity Low_complexity 1 22 0 1445 180 15 0 chr5 191652881 191653148 -7977002 + L1PA16 LINE L1 5894 6164 -2 471 113 0 0 chr5 191653201 191653272 -7976878 + (TCCC)n Simple_repeat Simple_repeat 3 73 0 568 109 27 18 chr5 191653380 191653490 -7976660 + CT-rich Low_complexity Low_complexity 4 114 0 1947 171 33 60 chr5 191653492 191653943 -7976207 - L1MB3 LINE L1 -84 6099 5661 1652 188 0 43 chr5 191653964 191654267 -7975883 + AluJb SINE Alu 1 290 -22 440 303 90 6 chr5 191654627 191654805 -7975345 + MIR SINE MIR 4 196 -66 1445 163 59 116 chr5 191655225 191655612 -7974538 - MLT1A1 LTR MaLR 0 365 1 444 300 24 29 chr5 191656414 191656584 -7973566 - MIR3 SINE MIR -8 200 32 1850 147 30 20 chr5 191656840 191657140 -7973010 - AluJo SINE Alu -9 303 1 342 216 148 11 chr5 191657154 191657242 -7972908 + MIR SINE MIR 111 210 -52 453 252 30 30 chr5 191657376 191657507 -7972643 + MIR3 SINE MIR 13 143 -65 258 282 250 0 chr5 191657544 191657668 -7972482 - L2 LINE L2 0 3313 3159 3129 234 61 52 chr5 191657782 191659052 -7971098 - L1MC5 LINE L1 -8 7953 6673 796 249 5 21 chr5 191659522 191659711 -7970439 - MIR SINE MIR -74 188 3 429 239 81 62 chr5 191659882 191660044 -7970106 + MIR SINE MIR 94 262 0 495 282 45 6 chr5 191660068 191660224 -7969926 - MIR SINE MIR -57 205 44 216 0 0 0 chr5 191660919 191660943 -7969207 + (A)n Simple_repeat Simple_repeat 1 24 0 26 50 0 0 chr5 191661009 191661049 -7969101 + AT_rich Low_complexity Low_complexity 1 40 0 24 77 0 0 chr5 191661171 191661223 -7968927 + GC_rich Low_complexity Low_complexity 1 52 0 26 50 0 0 chr5 191661500 191661540 -7968610 + GC_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr5 191661692 191661716 -7968434 + GC_rich Low_complexity Low_complexity 1 24 0 1582 120 83 91 chr5 191662203 191662471 -7967679 - Tigger3(Golem) DNA MER2_type 0 3028 2759 183 42 0 0 chr5 191662471 191662495 -7967655 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1582 120 83 91 chr5 191662495 191662577 -7967573 - Tigger3(Golem) DNA MER2_type -269 2759 1 228 254 74 98 chr5 191663376 191663498 -7966652 - MIR SINE MIR -82 180 62 300 53 0 0 chr5 191663516 191663554 -7966596 + (TG)n Simple_repeat Simple_repeat 2 39 0 217 270 79 0 chr5 191663560 191663623 -7966527 - MER5A DNA MER1_type -38 151 84 285 238 95 12 chr5 191664236 191664320 -7965830 + MIR SINE MIR 15 105 -157 4394 161 34 29 chr5 191664320 191664650 -7965500 - L1MB5 LINE L1 0 6174 5847 2304 111 0 3 chr5 191664650 191664956 -7965194 - AluSx SINE Alu -7 305 1 4394 161 34 29 chr5 191664956 191665564 -7964586 - L1MB5 LINE L1 -327 5847 5231 2047 101 4 11 chr5 191665565 191665843 -7964307 + AluSx SINE Alu 1 276 -36 299 151 0 0 chr5 191665864 191665917 -7964233 + Alu SINE Alu 246 298 -2 544 197 95 34 chr5 191665962 191666109 -7964041 + MIR SINE MIR 103 258 -4 239 306 48 24 chr5 191666162 191666286 -7963864 - L1ME LINE L1 -256 5865 5739 265 169 17 17 chr5 191666525 191666584 -7963566 + MLT1F LTR MaLR 4 62 -480 2483 90 0 0 chr5 191666615 191666916 -7963234 - AluSx SINE Alu -8 304 4 207 0 0 0 chr5 191667121 191667144 -7963006 + (T)n Simple_repeat Simple_repeat 1 23 0 195 333 0 0 chr5 191667251 191667302 -7962848 + L2 LINE L2 3248 3298 -15 231 36 0 0 chr5 191667304 191667332 -7962818 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 241 246 0 31 chr5 191667442 191667507 -7962643 + MIR SINE MIR 100 162 -100 368 219 6 138 chr5 191667615 191667775 -7962375 + MIR SINE MIR 74 212 -50 272 328 6 76 chr5 191667820 191667915 -7962235 + MIR SINE MIR 4 83 -179 2224 134 0 6 chr5 191667915 191668229 -7961921 - AluSx SINE Alu 0 312 1 272 328 6 76 chr5 191668229 191668304 -7961846 + MIR SINE MIR 83 162 -100 2213 121 3 0 chr5 191669620 191669918 -7960232 - AluSx SINE Alu -13 299 1 1132 259 69 30 chr5 191669942 191670347 -7959803 + L2 LINE L2 2809 3229 -84 2106 113 28 0 chr5 191670408 191670699 -7959451 - AluY SINE Alu -10 301 3 210 368 0 0 chr5 191670706 191670782 -7959368 + L2 LINE L2 3234 3309 -4 422 273 22 80 chr5 191670797 191671040 -7959110 - L1MC4a LINE L1 -302 5819 5609 2410 92 3 0 chr5 191671040 191671346 -7958804 - AluSp SINE Alu -6 307 1 422 273 22 80 chr5 191671346 191671431 -7958719 - L1MC4a LINE L1 -512 5609 5521 866 66 15 15 chr5 191671506 191671643 -7958507 + (TTTC)n Simple_repeat Simple_repeat 4 140 0 1747 158 10 47 chr5 191671667 191671964 -7958186 - AluJb SINE Alu -20 292 7 721 220 0 0 chr5 191672317 191672435 -7957715 + AluJo SINE Alu 8 125 -187 1265 182 9 13 chr5 191672445 191672670 -7957480 - AluJo SINE Alu -2 310 87 473 0 18 0 chr5 191672707 191672764 -7957386 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 2217 106 0 26 chr5 191672764 191673066 -7957084 - AluSx SINE Alu -18 294 1 993 194 6 0 chr5 191673080 191673240 -7956910 + AluJo SINE Alu 132 292 -20 2133 120 21 3 chr5 191673931 191674055 -7956095 + AluSx SINE Alu 1 121 -191 225 0 0 0 chr5 191674055 191674080 -7956070 + (CA)n Simple_repeat Simple_repeat 2 26 0 2133 120 21 3 chr5 191674080 191674246 -7955904 + AluSx SINE Alu 121 296 -16 374 266 21 0 chr5 191674452 191674546 -7955604 + MIR SINE MIR 41 136 -72 2375 87 3 23 chr5 191674741 191675051 -7955099 - AluY SINE Alu -7 304 1 792 181 0 8 chr5 191675141 191675274 -7954876 - FLAM_C SINE Alu -11 132 1 447 314 82 29 chr5 191675519 191675799 -7954351 - L2 LINE L2 -349 2965 2671 567 284 70 94 chr5 191675810 191676030 -7954120 + L2 LINE L2 2517 2741 -572 1721 180 3 43 chr5 191676030 191676353 -7953797 + AluJb SINE Alu 1 310 -2 567 284 70 94 chr5 191676353 191676958 -7953192 + L2 LINE L2 2741 3313 0 180 203 51 68 chr5 191677089 191677148 -7953002 + MIR SINE MIR 95 152 -110 290 336 19 19 chr5 191677717 191677824 -7952326 + MIR SINE MIR 31 137 -71 25 51 0 0 chr5 191678500 191678539 -7951611 + AT_rich Low_complexity Low_complexity 1 39 0 426 238 92 49 chr5 191678888 191679052 -7951098 - MIR SINE MIR -12 250 80 2387 106 0 0 chr5 191680138 191680440 -7949710 + AluSx SINE Alu 1 302 -10 1054 131 26 0 chr5 191680752 191680905 -7949245 - FRAM SINE Alu 0 40 1 26 0 0 0 chr5 191680912 191680938 -7949212 + AT_rich Low_complexity Low_complexity 1 26 0 11791 168 26 23 chr5 191730941 191736620 -7893530 - L1PA8A LINE L1 -615 5831 124 1633 105 63 118 chr5 191736620 191736935 -7893215 - AluSq SINE Alu -15 298 1 11791 168 26 23 chr5 191736935 191737060 -7893090 - L1PA8A LINE L1 -6322 124 1 1920 143 17 58 chr5 191737058 191737470 -7892680 - L1M4c LINE L1 -5286 1098 704 * 210 37 0 0 chr5 191737617 191737644 -7892506 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 236 227 0 0 chr5 191737647 191737691 -7892459 - L1M4c LINE L1 -5893 491 448 26 50 0 0 chr5 191738523 191738563 -7891587 + AT_rich Low_complexity Low_complexity 1 40 0 534 152 0 0 chr5 191738868 191738947 -7891203 + AluSx SINE Alu 1 79 -234 2577 70 219 120 chr5 191738949 191739464 -7890686 - LTR12 LTR ERV1 -148 566 1 1794 105 0 12 chr5 191739464 191739711 -7890439 + AluSx SINE Alu 63 306 -6 401 81 16 0 chr5 191740570 191740658 -7889492 - Alu SINE Alu 0 336 248 318 50 0 0 chr5 191740758 191740798 -7889352 + (TCCA)n Simple_repeat Simple_repeat 4 43 0 766 307 121 9 chr5 191740801 191741224 -7888926 + L2 LINE L2 1493 1962 -1352 382 298 18 9 chr5 191741224 191741338 -7888812 + MER94 DNA DNA 1 115 -19 220 306 28 14 chr5 191741385 191741457 -7888693 + L2 LINE L2 3205 3277 -36 282 56 0 0 chr5 191742139 191742175 -7887975 + (CA)n Simple_repeat Simple_repeat 2 37 0 25 0 0 0 chr5 191742360 191742385 -7887765 + AT_rich Low_complexity Low_complexity 1 25 0 308 315 16 39 chr5 191743016 191743143 -7887007 - MIR SINE MIR -132 130 7 293 298 124 13 chr5 191743693 191743918 -7886232 - L1ME4a LINE L1 -195 5926 5677 1872 102 20 0 chr5 191743971 191744215 -7885935 - L1PA10 LINE L1 -8 6160 5912 319 330 0 10 chr5 191745473 191745570 -7884580 + MIR SINE MIR 2 97 -165 338 186 0 0 chr5 191745570 191745629 -7884521 + MIR SINE MIR 204 262 0 201 200 67 0 chr5 191745985 191746045 -7884105 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 321 308 27 27 chr5 191746439 191746604 -7883546 - MIR SINE MIR -57 151 19 2303 75 0 10 chr5 191746778 191747094 -7883056 - AluY SINE Alu 0 313 1 1493 182 3 56 chr5 191747107 191747409 -7882741 - AluJb SINE Alu -26 286 1 875 200 24 33 chr5 191747743 191747953 -7882197 + MLT1D LTR MaLR 1 208 -297 323 235 102 51 chr5 191747956 191748054 -7882096 + MER5A DNA MER1_type 24 126 -63 436 194 74 29 chr5 191748122 191748279 -7881871 - Charlie8 DNA MER1_type -2212 205 2 197 336 96 40 chr5 191748299 191748424 -7881726 + MIR SINE MIR 30 161 -101 2274 108 0 3 chr5 191748545 191748851 -7881299 - AluSg SINE Alu -2 308 4 1287 198 164 31 chr5 191749253 191749498 -7880652 - LTR64 LTR ERVK 0 558 258 2044 93 0 0 chr5 191749498 191749768 -7880382 + AluY SINE Alu 39 308 -3 1287 198 164 31 chr5 191749768 191749845 -7880305 - LTR64 LTR ERVK -300 258 193 7227 116 175 68 chr5 191749845 191751378 -7878772 + pTR5 LTR ERV1 743 2438 0 1016 179 10 0 chr5 191751380 191751575 -7878575 - LTR64 LTR ERVK -361 197 1 6736 152 44 49 chr5 191752090 191753576 -7876574 - L1MA9 LINE L1 0 6312 4859 261 0 0 0 chr5 191753576 191753605 -7876545 + (TG)n Simple_repeat Simple_repeat 2 30 0 6736 152 44 49 chr5 191753605 191754568 -7875582 - L1MA9 LINE L1 -1453 4859 3893 422 125 113 0 chr5 191754556 191754636 -7875514 - L1 LINE L1 -1153 4993 4905 * 7948 32 8 0 chr5 191754769 191756322 -7873828 + L1PA4 LINE L1 4598 6154 -1 373 197 61 0 chr5 191758185 191758332 -7871818 + (TA)n Simple_repeat Simple_repeat 2 157 0 6296 85 11 6 chr5 191758341 191759606 -7870544 - L1PA13 LINE L1 -1 6162 4873 364 275 8 53 chr5 191759629 191759760 -7870390 - L2 LINE L2 -9 3304 3180 1671 202 56 24 chr5 191759778 191760228 -7869922 - L1M4 LINE L1 -1673 4473 4010 419 246 18 35 chr5 191760273 191760387 -7869763 + L1PA12 LINE L1 684 795 -6786 286 247 151 0 chr5 191760437 191760530 -7869620 + L1M3 LINE L1 4809 4915 -1231 1687 180 67 6 chr5 191760593 191760938 -7869212 + L1M3 LINE L1 5364 5729 -454 1143 224 4 18 chr5 191760939 191761220 -7868930 + L1PA15 LINE L1 4919 5195 -951 1086 124 0 0 chr5 191761221 191761366 -7868784 + LTR8 LTR ERV1 547 691 0 11654 127 37 37 chr5 191761366 191762522 -7867628 + HUERS-P1 LTR ERV1 1 1156 -5107 2265 79 48 0 chr5 191762522 191762813 -7867337 - AluSp SINE Alu -8 305 1 11654 127 37 37 chr5 191762813 191762842 -7867308 + HUERS-P1 LTR ERV1 1156 1184 -5079 258 32 0 0 chr5 191762842 191762873 -7867277 + (TC)n Simple_repeat Simple_repeat 2 32 0 11654 127 37 37 chr5 191762873 191763643 -7866507 + HUERS-P1 LTR ERV1 1183 1957 -4306 3119 171 33 35 chr5 191763684 191763876 -7866274 + L1PA15 LINE L1 5586 5777 -388 2350 99 0 3 chr5 191763876 191764180 -7865970 + AluY SINE Alu 1 303 -8 3119 171 33 35 chr5 191764180 191764567 -7865583 + L1PA15 LINE L1 5777 6164 -1 1543 147 3 107 chr5 191764671 191764998 -7865152 - MER1B DNA MER1_type -1 338 46 293 172 70 70 chr5 191765021 191765149 -7865001 - L1MEc LINE L1 -4124 2272 2145 412 219 16 0 chr5 191765170 191765293 -7864857 + (TA)n Simple_repeat Simple_repeat 1 125 0 4032 275 72 38 chr5 191765295 191767315 -7862835 - L1MEc LINE L1 -4267 2129 40 517 203 73 145 chr5 191767331 191767544 -7862606 - L1MEc LINE L1 -4775 1621 1451 2188 130 0 7 chr5 191767544 191767851 -7862299 - AluSx SINE Alu -7 305 1 517 203 73 145 chr5 191767851 191768050 -7862100 - L1MEc LINE L1 -4945 1451 1239 311 294 5 75 chr5 191768524 191768711 -7861439 - L1MC4a LINE L1 -1941 5867 5694 28 0 0 0 chr5 191769011 191769039 -7861111 + AT_rich Low_complexity Low_complexity 1 28 0 403 348 90 10 chr5 191769150 191769460 -7860690 - L1MC4a LINE L1 -2138 5670 5336 4838 124 18 52 chr5 191770694 191772134 -7858016 + pTR5 LTR ERV1 743 2438 0 1709 82 0 0 chr5 191772255 191772463 -7857687 + AluY SINE Alu 22 229 -82 195 232 72 43 chr5 191773003 191773072 -7857078 - MIR SINE MIR -63 145 74 23678 195 19 16 chr5 191773172 191779182 -7850968 + L1PA12 LINE L1 24 6859 -743 204 211 19 58 chr5 191779232 191779284 -7850866 + MIR SINE MIR 18 67 -141 727 191 23 0 chr5 191779953 191780084 -7850066 + MER94 DNA DNA 1 134 0 2193 108 0 3 chr5 191780404 191780710 -7849440 - AluSx SINE Alu -7 305 1 1573 203 24 47 chr5 191781340 191781358 -7848792 - L1ME3 LINE L1 -1 6161 6144 1425 151 43 146 chr5 191781358 191781775 -7848375 + MLT1A2 LTR MaLR 1 374 0 1573 203 24 47 chr5 191781775 191781826 -7848324 - L1ME3 LINE L1 -18 6144 6093 2331 94 3 0 chr5 191781826 191782123 -7848027 - AluSx SINE Alu -14 298 1 1573 203 24 47 chr5 191782123 191782459 -7847691 - L1ME3 LINE L1 -69 6093 5766 703 226 126 25 chr5 191782792 191782991 -7847159 - MIR SINE MIR -43 219 1 428 219 27 0 chr5 191783676 191783749 -7846401 - FLAM_A SINE Alu -59 83 9 421 273 14 14 chr5 191783753 191783896 -7846254 + (CA)n Simple_repeat Simple_repeat 1 143 0 207 0 0 0 chr5 191784099 191784122 -7846028 + (A)n Simple_repeat Simple_repeat 1 23 0 1323 247 48 75 chr5 191784132 191784651 -7845499 + MER77 LTR ERV1 54 558 -47 592 158 123 0 chr5 191785427 191785541 -7844609 + MLT1A2 LTR MaLR 1 128 -246 8048 151 10 12 chr5 191785542 191786844 -7843306 + L1M1 LINE L1 23 1321 -6244 814 200 7 7 chr5 191788083 191788238 -7841912 + MER5A DNA MER1_type 2 156 -33 1654 172 11 4 chr5 191788968 191789241 -7840909 + AluJo SINE Alu 1 275 -37 477 289 145 34 chr5 191789315 191789694 -7840456 + L1ME LINE L1 5283 5703 -418 180 111 0 0 chr5 191789988 191790015 -7840135 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 779 198 36 16 chr5 191790053 191790269 -7839881 - L1MB8 LINE L1 -215 5963 5771 1664 155 84 3 chr5 191791533 191791817 -7838333 - AluJb SINE Alu -5 307 1 2275 64 7 20 chr5 191791845 191792142 -7838008 + AluY SINE Alu 1 293 -18 857 156 0 15 chr5 191792262 191792397 -7837753 + AluJb SINE Alu 1 133 -179 902 138 0 14 chr5 191793358 191793496 -7836654 + AluJb SINE Alu 121 256 -56 2053 123 0 14 chr5 191794010 191794302 -7835848 + AluJb SINE Alu 9 296 -16 281 272 29 37 chr5 191794331 191794467 -7835683 - L1ME4a LINE L1 -201 5920 5786 217 320 39 13 chr5 191794989 191795067 -7835083 + MIR SINE MIR 20 99 -109 2462 77 3 0 chr5 191795378 191795678 -7834472 - AluY SINE Alu -10 301 1 1834 139 47 30 chr5 191796436 191796737 -7833413 + AluJb SINE Alu 1 306 -6 2041 159 0 0 chr5 191796863 191797165 -7832985 - AluSx SINE Alu -10 302 1 297 111 12 48 chr5 191797259 191797321 -7832829 - L1P1 LINE L1 -364 5757 5709 * 301 211 35 53 chr5 191797317 191797431 -7832719 + L1ME LINE L1 5711 5822 -299 2496 57 0 7 chr5 191797440 191797739 -7832411 + AluY SINE Alu 2 298 -13 320 238 129 65 chr5 191797866 191798042 -7832108 + MIR3 SINE MIR 18 201 -7 1707 150 49 7 chr5 191798275 191798561 -7831589 - AluJb SINE Alu -14 298 1 2062 115 37 3 chr5 191798630 191798925 -7831225 - AluSx SINE Alu -7 305 1 1941 148 0 7 chr5 191799025 191799328 -7830822 - AluSq SINE Alu -11 302 2 623 102 8 25 chr5 191799397 191799515 -7830635 + (TTTC)n Simple_repeat Simple_repeat 1 116 0 1478 83 102 0 chr5 191799519 191799724 -7830426 - AluY SINE Alu -2 309 84 2237 92 0 30 chr5 191799878 191800183 -7829967 + AluSx SINE Alu 17 312 0 5056 90 15 12 chr5 191800194 191800928 -7829222 + L1PA11 LINE L1 5439 6174 0 347 128 64 16 chr5 191801239 191801364 -7828786 + (TA)n Simple_repeat Simple_repeat 2 132 0 374 314 111 6 chr5 191801502 191801674 -7828476 - MLT1K LTR MaLR -2 586 397 213 286 65 0 chr5 191801715 191801792 -7828358 + L2 LINE L2 2950 3031 -241 776 149 15 8 chr5 191801830 191801964 -7828186 - MLT1A1 LTR MaLR -2 363 229 1076 105 0 0 chr5 191801990 191802146 -7828004 + AluSg/x SINE Alu 150 305 0 795 221 42 37 chr5 191802195 191802385 -7827765 - MLT1A1 LTR MaLR -171 194 4 942 279 90 25 chr5 191802512 191802877 -7827273 + MLT1J2 LTR MaLR 1 389 -61 593 223 121 106 chr5 191802916 191803357 -7826793 - MLT1H LTR MaLR -2 540 66 260 170 132 0 chr5 191803404 191803457 -7826693 + MLT1I LTR MaLR 347 406 -3 386 239 84 0 chr5 191803471 191803626 -7826524 + MER113 DNA MER1_type? 1 168 -353 220 289 0 0 chr5 191804332 191804384 -7825766 + CT-rich Low_complexity Low_complexity 4 55 0 322 263 88 23 chr5 191805009 191805180 -7824970 - MER5A DNA MER1_type 0 189 8 292 250 58 19 chr5 191805599 191805703 -7824447 + MIR SINE MIR 33 140 -68 186 296 92 20 chr5 191806532 191806630 -7823520 - L2 LINE L2 -32 3240 3136 444 266 28 0 chr5 191807132 191807275 -7822875 + L2 LINE L2 2896 3042 -271 2256 101 7 0 chr5 191807569 191807865 -7822285 + AluSp SINE Alu 5 302 -11 254 277 0 0 chr5 191808213 191808278 -7821872 - MIR SINE MIR -66 142 78 227 267 40 30 chr5 191808404 191808505 -7821645 + Charlie7 DNA MER1_type 1 102 -2510 2230 107 3 13 chr5 191808792 191809100 -7821050 - AluSq SINE Alu -8 305 1 189 333 49 16 chr5 191809706 191809829 -7820321 - L2 LINE L2 -467 2847 2721 326 244 11 22 chr5 191810105 191810195 -7819955 - L2 LINE L2 -1006 2308 2220 557 254 0 0 chr5 191810277 191810391 -7819759 + MER63 DNA MER1_type 673 786 -276 391 266 101 17 chr5 191811291 191811499 -7818651 + MIR SINE MIR 12 242 -20 313 270 155 58 chr5 191811862 191812034 -7818116 - L1ME4a LINE L1 -38 6083 5929 2134 106 3 10 chr5 191812034 191812326 -7817824 - AluSg SINE Alu -20 290 1 313 270 155 58 chr5 191812326 191812401 -7817749 - L1ME4a LINE L1 -192 5929 5863 1162 42 0 7 chr5 191812401 191812594 -7817556 + L1PA2 LINE L1 6011 6155 0 313 270 155 58 chr5 191812594 191812848 -7817302 - L1ME4a LINE L1 -258 5863 5532 208 210 32 32 chr5 191813473 191813535 -7816615 + GA-rich Low_complexity Low_complexity 5 66 0 1323 237 32 46 chr5 191814019 191814391 -7815759 - MLT1B LTR MaLR -11 379 13 773 187 0 29 chr5 191814471 191814610 -7815540 + FLAM_C SINE Alu 3 137 -6 377 390 57 19 chr5 191814623 191814995 -7815155 + HAL1 LINE L1 1369 1754 -753 449 203 0 8 chr5 191815149 191815272 -7814878 + (TG)n Simple_repeat Simple_repeat 2 123 0 514 261 96 13 chr5 191815298 191815455 -7814695 + LTR41 LTR ERVL 3 172 -601 353 208 0 0 chr5 191815644 191815716 -7814434 + LTR41 LTR ERVL 587 658 -115 6224 109 4 7 chr5 191815722 191816632 -7813518 + L1PA14 LINE L1 5254 6161 0 241 238 98 70 chr5 191816651 191816794 -7813356 + LTR41 LTR ERVL 627 773 0 231 226 0 0 chr5 191817311 191817364 -7812786 + L1MC4 LINE L1 7926 7978 -64 1313 96 0 0 chr5 191817700 191817867 -7812283 - AluSg/x SINE Alu -14 296 130 227 370 78 33 chr5 191817892 191818224 -7811926 + L2 LINE L2 2837 3183 -89 435 240 24 24 chr5 191818285 191818410 -7811740 - MIR SINE MIR -115 147 23 260 309 12 0 chr5 191818428 191818512 -7811638 + L2 LINE L2 3187 3271 -1 203 336 26 35 chr5 191819290 191819403 -7810747 + MIR SINE MIR 46 157 -105 264 274 41 0 chr5 191819411 191819484 -7810666 - MIR SINE MIR -103 159 84 2446 73 0 3 chr5 191819498 191819798 -7810352 + AluSc SINE Alu 1 299 -10 2485 53 3 0 chr5 191820036 191820335 -7809815 + AluY SINE Alu 1 300 -11 518 114 11 0 chr5 191820923 191821011 -7809139 + (TCCA)n Simple_repeat Simple_repeat 4 92 0 515 207 24 79 chr5 191821018 191821182 -7808968 - L2 LINE L2 0 3313 3159 220 331 154 0 chr5 191821334 191821509 -7808641 - L2 LINE L2 -372 2942 2741 2083 103 0 24 chr5 191822531 191822845 -7807305 - AluSx SINE Alu 0 307 1 372 256 43 26 chr5 191823629 191823746 -7806404 - MIR SINE MIR -114 148 30 1614 224 28 17 chr5 191824165 191824526 -7805624 - MER110 LTR ERV1 0 491 127 1473 135 42 8 chr5 191824545 191824804 -7805346 - L1MB3 LINE L1 0 6183 5916 272 319 0 0 chr5 191824806 191824878 -7805272 + MER110 LTR ERV1 15 86 -405 674 149 99 0 chr5 191825760 191825881 -7804269 - FLAM_C SINE Alu 0 133 1 808 200 12 0 chr5 191825884 191826044 -7804106 + MER20 DNA MER1_type 57 218 -1 451 209 95 68 chr5 191826133 191826281 -7803869 - MIR SINE MIR -71 191 40 782 266 55 34 chr5 191826462 191826755 -7803395 + MER110 LTR ERV1 188 486 -5 354 98 0 146 chr5 191827038 191827080 -7803070 + MER41B LTR ERV1 481 507 -128 2453 71 7 0 chr5 191827080 191827374 -7802776 - AluSg SINE Alu -14 296 1 354 98 0 146 chr5 191827374 191827413 -7802737 + MER41B LTR ERV1 507 550 -85 1807 93 4 4 chr5 191827501 191827540 -7802610 + L1PA7 LINE L1 5575 5613 -541 857 112 6 37 chr5 191827540 191827701 -7802449 - L1MA8 LINE L1 -3 6288 6133 1807 93 4 4 chr5 191827701 191827923 -7802227 + L1PA7 LINE L1 5613 5835 -319 2886 99 15 0 chr5 191827923 191828321 -7801829 + L1PA7 LINE L1 5745 6154 0 22 0 0 0 chr5 191828322 191828344 -7801806 + AT_rich Low_complexity Low_complexity 1 22 0 5022 144 17 42 chr5 191828689 191829534 -7800616 - L1MA8 LINE L1 -151 6140 5335 2282 100 0 3 chr5 191829534 191829833 -7800317 - AluSg SINE Alu -12 298 1 5022 144 17 42 chr5 191829833 191830398 -7799752 - L1MA8 LINE L1 -956 5335 4758 2696 129 18 16 chr5 191830412 191830860 -7799290 - L1MA6 LINE L1 0 6300 5852 505 289 87 19 chr5 191831033 191831241 -7798909 - Charlie8 DNA MER1_type -2195 222 1 231 276 0 0 chr5 191831870 191831928 -7798222 + L2 LINE L2 2992 3049 -223 1142 272 46 49 chr5 191832149 191832271 -7797879 + MLT1G LTR MaLR 1 122 -433 2402 91 0 0 chr5 191832271 191832569 -7797581 + AluSx SINE Alu 1 298 -14 1142 272 46 49 chr5 191832569 191832767 -7797383 + MLT1G LTR MaLR 122 319 -236 180 0 0 0 chr5 191832767 191832787 -7797363 + (GA)n Simple_repeat Simple_repeat 1 20 0 1142 272 46 49 chr5 191832787 191833006 -7797144 + MLT1G LTR MaLR 319 555 0 427 315 66 10 chr5 191833162 191833359 -7796791 + MLT1G-int LTR MaLR 325 532 -839 4245 138 12 6 chr5 191834040 191834722 -7795428 - L1PA15 LINE L1 0 6816 6131 16979 212 16 13 chr5 191834728 191839410 -7790740 - L1PA15 LINE L1 -910 5887 1185 571 226 81 111 chr5 191839448 191839745 -7790405 + MLT1G-int LTR MaLR 1084 1371 0 756 271 55 37 chr5 191839753 191840262 -7789888 + MLT1G LTR MaLR 10 542 0 2120 89 68 0 chr5 191840342 191840622 -7789528 + AluSp SINE Alu 4 302 -11 657 272 31 39 chr5 191841360 191841712 -7788438 + L1ME LINE L1 5165 5522 -642 326 276 26 77 chr5 191841745 191841848 -7788302 + L1ME LINE L1 5514 5608 -554 1152 279 99 31 chr5 191841848 191842332 -7787818 + LTR33 LTR ERVL 1 517 -4 326 276 26 77 chr5 191842332 191842384 -7787766 + L1ME LINE L1 5608 5661 -501 1355 181 26 36 chr5 191842415 191842718 -7787432 - MER33 DNA MER1_type -23 301 2 1890 133 0 53 chr5 191842889 191843209 -7786941 - AluSx SINE Alu 0 304 1 1786 48 5 0 chr5 191843393 191843603 -7786547 - L1PA4 LINE L1 -8 6147 5937 2832 109 0 6 chr5 191843805 191844171 -7785979 - THE1B LTR MaLR 0 364 1 198 0 0 0 chr5 191845280 191845302 -7784848 + (T)n Simple_repeat Simple_repeat 1 22 0 189 0 0 0 chr5 191845429 191845450 -7784700 + (A)n Simple_repeat Simple_repeat 1 21 0 871 139 47 17 chr5 191845564 191845736 -7784414 - MER53 DNA DNA -12 177 1 854 263 21 17 chr5 191845786 191846026 -7784124 + MIR SINE MIR 20 260 -2 25 31 0 0 chr5 191846570 191846602 -7783548 + AT_rich Low_complexity Low_complexity 1 32 0 265 290 57 0 chr5 191846814 191846938 -7783212 - L1MC4a LINE L1 -1901 5907 5777 289 176 118 39 chr5 191847047 191847149 -7783001 + L1M4 LINE L1 2923 3032 -3114 * 4847 220 84 83 chr5 191847122 191847618 -7782532 + L1M4 LINE L1 3331 3825 -2321 849 146 0 23 chr5 191847618 191847748 -7782402 - FLAM_C SINE Alu -16 127 1 4847 220 84 83 chr5 191847748 191849090 -7781060 + L1M4 LINE L1 3825 5300 -846 619 163 53 0 chr5 191849080 191849199 -7780951 + L1MB7 LINE L1 6043 6168 -3 * 287 336 14 34 chr5 191850558 191850704 -7779446 + MLT1K LTR MaLR 155 297 -291 233 310 228 22 chr5 191850776 191850960 -7779190 - MIR SINE MIR -24 238 17 181 325 36 36 chr5 191851791 191851874 -7778276 - MIR SINE MIR -63 199 117 1131 223 73 11 chr5 191851888 191852162 -7777988 - MLT1C LTR MaLR 0 467 177 527 113 43 17 chr5 191852180 191852295 -7777855 + CT-rich Low_complexity Low_complexity 1 118 0 585 228 101 21 chr5 191852297 191852324 -7777826 - MLT1C LTR MaLR -186 204 181 1697 179 0 7 chr5 191852324 191852614 -7777536 - AluJo SINE Alu -24 288 1 585 228 101 21 chr5 191852614 191852775 -7777375 - MLT1C LTR MaLR -209 181 1 486 280 89 10 chr5 191852814 191853012 -7777138 + MIR SINE MIR 35 246 -16 2503 74 3 6 chr5 191853058 191853370 -7776780 + AluY SINE Alu 1 311 0 388 350 12 12 chr5 191853582 191853742 -7776408 + L3b LINE CR1 1209 1368 -215 986 261 128 15 chr5 191853961 191854352 -7775798 - MLT1J2 LTR MaLR -10 440 6 274 218 0 0 chr5 191854556 191854611 -7775539 - LTR16C LTR ERVL -1 490 436 877 208 51 35 chr5 191854743 191854998 -7775152 + LTR16C LTR ERVL 231 489 -2 564 303 62 62 chr5 191855373 191855696 -7774454 + L2 LINE L2 2991 3313 0 474 198 16 7 chr5 191855786 191855878 -7774272 + MLT1B LTR MaLR 1 89 -301 1101 218 116 31 chr5 191855893 191856186 -7773964 - L1MA9 LINE L1 -8 6304 5987 1344 221 57 0 chr5 191856186 191856467 -7773683 + MLT1B LTR MaLR 89 385 -5 188 349 32 0 chr5 191857418 191857481 -7772669 - MIR3 SINE MIR -3 205 141 463 305 61 33 chr5 191857509 191857722 -7772428 + MIR SINE MIR 3 221 -41 2653 182 64 6 chr5 191858399 191858867 -7771283 + LTR42 LTR ERVL 1 495 0 236 182 91 64 chr5 191858925 191859035 -7771115 - Charlie7 DNA MER1_type -47 2565 2453 1867 66 0 4 chr5 191859100 191859328 -7770822 - L1PA5 LINE L1 -11 6143 5917 748 215 52 146 chr5 191860124 191860706 -7769444 + MLT1H LTR MaLR 21 547 -2 246 294 118 66 chr5 191860733 191861145 -7769005 + L2 LINE L2 2779 3191 -81 233 216 0 0 chr5 191861835 191861886 -7768264 - L2 LINE L2 0 3313 3263 605 328 132 16 chr5 191861979 191862425 -7767725 + L2 LINE L2 2777 3273 -40 30 0 0 0 chr5 191862688 191862718 -7767432 + AT_rich Low_complexity Low_complexity 1 30 0 237 169 239 0 chr5 191862770 191862841 -7767309 + L1ME4a LINE L1 5524 5611 -510 234 0 0 0 chr5 191862904 191862930 -7767220 + (A)n Simple_repeat Simple_repeat 1 26 0 754 25 0 0 chr5 191863024 191863105 -7767045 + AluY SINE Alu 50 130 -181 425 276 80 22 chr5 191863154 191863429 -7766721 + L1ME4a LINE L1 5830 6120 -1 527 349 154 11 chr5 191863880 191864637 -7765513 - L2 LINE L2 -183 3089 2228 205 354 94 41 chr5 191864784 191865315 -7764835 - L2 LINE L2 -2553 761 203 751 296 53 78 chr5 191865391 191865525 -7764625 - L2 LINE L2 -5 3308 3172 279 0 0 0 chr5 191865525 191865556 -7764594 + (TG)n Simple_repeat Simple_repeat 1 31 0 751 296 53 78 chr5 191865556 191865920 -7764230 - L2 LINE L2 -141 3172 2817 2094 173 60 22 chr5 191865920 191866371 -7763779 - MER110A LTR ERV1 0 468 1 751 296 53 78 chr5 191866371 191866425 -7763725 - L2 LINE L2 -496 2817 2763 538 256 150 59 chr5 191866434 191866754 -7763396 - MLT1H LTR MaLR 0 549 201 1081 66 7 0 chr5 191866787 191866923 -7763227 - AluYa5 SINE Alu -19 292 156 2007 120 0 3 chr5 191866923 191867206 -7762944 + AluY SINE Alu 20 301 -10 239 384 28 11 chr5 191867343 191867520 -7762630 + L2 LINE L2 2871 3050 -222 737 200 135 16 chr5 191867657 191867894 -7762256 - MLT1F1 LTR MaLR -51 603 201 1350 181 81 0 chr5 191868278 191868538 -7761612 - MER1B DNA MER1_type 0 339 59 1003 233 59 21 chr5 191868573 191869003 -7761147 + MER74A LTR ERVL 4 528 -30 740 245 80 7 chr5 191869056 191869399 -7760751 - MLT1J2 LTR MaLR 0 450 37 603 239 38 22 chr5 191869400 191869584 -7760566 - MIR SINE MIR -44 218 32 372 276 51 0 chr5 191869715 191869813 -7760337 - MER91C DNA MER1_type -37 103 1 205 333 0 0 chr5 191869831 191869885 -7760265 - L2 LINE L2 -8 3264 3211 194 83 56 0 chr5 191870973 191871009 -7759141 + CT-rich Low_complexity Low_complexity 1 38 0 181 305 85 0 chr5 191871379 191871438 -7758712 - L2 LINE L2 -2 3311 3248 292 306 75 22 chr5 191871501 191871635 -7758515 + MIR SINE MIR 114 254 -8 589 111 10 10 chr5 191872178 191872277 -7757873 + THE1C-int LTR MaLR 1482 1580 0 479 141 51 0 chr5 191872279 191872357 -7757793 + THE1C LTR MaLR 3 84 -291 219 69 0 0 chr5 191873095 191873124 -7757026 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 3604 129 64 8 chr5 191873898 191874511 -7755639 + L1MA8 LINE L1 5644 6290 -1 451 251 174 19 chr5 191875172 191875379 -7754771 - MIR SINE MIR -6 256 18 223 224 35 0 chr5 191875569 191875654 -7754496 + CT-rich Low_complexity Low_complexity 2 89 0 354 259 44 34 chr5 191876753 191876930 -7753220 - MIR SINE MIR -38 224 4 286 220 96 73 chr5 191877042 191877219 -7752931 - Charlie7 DNA MER1_type -16 2596 2416 232 365 10 0 chr5 191877270 191877374 -7752776 + L2 LINE L2 3168 3272 0 921 202 0 0 chr5 191877374 191877629 -7752521 + (TGGA)n Simple_repeat Simple_repeat 1 255 0 239 306 52 71 chr5 191877848 191878116 -7752034 - L2 LINE L2 -655 2659 2397 349 228 172 41 chr5 191878138 191878283 -7751867 - MIR SINE MIR -3 259 96 240 233 0 155 chr5 191878597 191878664 -7751486 - L2 LINE L2 -1 3312 3269 429 272 231 0 chr5 191878664 191878837 -7751313 - MER58C DNA MER1_type -2 213 1 240 233 0 155 chr5 191878837 191878885 -7751265 - L2 LINE L2 -44 3269 3215 194 301 55 68 chr5 191878976 191879049 -7751101 + L2 LINE L2 3112 3183 -89 455 307 26 7 chr5 191879530 191879683 -7750467 + MIR SINE MIR 70 225 -37 256 303 163 4 chr5 191881053 191881330 -7748820 - MLT1K LTR MaLR -2 586 266 2291 103 0 3 chr5 191881768 191882069 -7748081 - AluSx SINE Alu -12 300 1 1415 254 55 36 chr5 191883875 191884652 -7745498 - L1ME3A LINE L1 -224 5929 5103 1025 189 0 26 chr5 191884924 191885115 -7745035 + AluJo SINE Alu 89 274 -38 752 268 44 17 chr5 191885135 191885430 -7744720 - L1ME3A LINE L1 -3595 2534 2232 1195 195 5 28 chr5 191885437 191885652 -7744498 - MER82 DNA MER2_type 0 653 444 409 313 17 67 chr5 191885682 191885861 -7744289 + MIR SINE MIR 2 171 -37 498 228 0 0 chr5 191885903 191885995 -7744155 - MER82 DNA MER2_type -560 93 2 234 257 14 14 chr5 191886133 191886203 -7743947 + HsTC2 DNA Tc2 7 76 -1822 599 147 0 11 chr5 191886229 191886324 -7743826 + MER4A LTR ERV1 1 94 -570 1833 106 164 95 chr5 191886327 191886705 -7743445 + MER4A LTR ERV1 261 664 0 1001 232 67 32 chr5 191886727 191887072 -7743078 + HsTC2 DNA Tc2 1284 1816 -82 524 238 95 5 chr5 191887112 191887322 -7742828 + HsTC2 DNA Tc2 1667 1895 -3 356 285 156 52 chr5 191887671 191888407 -7741743 - L1MEd LINE L1 -4579 1731 809 1952 86 0 4 chr5 191888407 191888710 -7741440 - AluY SINE Alu 0 341 40 356 285 156 52 chr5 191888710 191889033 -7741117 - L1MEd LINE L1 -5501 809 521 181 292 15 0 chr5 191889652 191889717 -7740433 + MIR SINE MIR 158 223 -39 370 335 11 11 chr5 191890122 191890307 -7739843 - L2 LINE L2 -399 2915 2731 1327 210 112 44 chr5 191890313 191890723 -7739427 + L1ME2 LINE L1 5693 6130 -34 903 187 48 19 chr5 191891290 191891499 -7738651 - MER20 DNA MER1_type -4 215 1 2176 117 3 7 chr5 191891914 191892214 -7737936 - AluSc SINE Alu 0 309 11 370 75 0 60 chr5 191892231 191892298 -7737852 - L1PA10 LINE L1 -3 6165 6103 1147 80 0 0 chr5 191892299 191892449 -7737701 + L1PA8A LINE L1 5750 5899 -232 2357 99 0 6 chr5 191892466 191892779 -7737371 - AluY SINE Alu 0 311 1 1721 82 0 26 chr5 191893013 191893245 -7736905 - AluY SINE Alu -76 235 10 240 169 182 13 chr5 191893270 191893347 -7736803 - MIR SINE MIR -11 251 162 286 333 54 0 chr5 191893488 191893599 -7736551 + L2 LINE L2 3137 3253 -19 341 356 47 30 chr5 191894038 191894274 -7735876 - MIR SINE MIR -3 259 20 1092 286 116 57 chr5 191895061 191896200 -7733950 - L2 LINE L2 -5 3308 2101 239 293 13 0 chr5 191896195 191896270 -7733880 + MIR SINE MIR 94 169 -93 * 542 319 105 31 chr5 191896551 191896910 -7733240 + L2 LINE L2 2046 2456 -858 2764 137 54 20 chr5 191896910 191896923 -7733227 + L1MA4 LINE L1 5738 5749 -551 2387 76 0 3 chr5 191896923 191897224 -7732926 + AluY SINE Alu 1 300 -11 2764 137 54 20 chr5 191897224 191897750 -7732400 + L1MA4 LINE L1 5749 6295 -5 542 319 105 31 chr5 191897750 191897904 -7732246 + L2 LINE L2 2456 2597 -717 2200 153 42 8 chr5 191898118 191898497 -7731653 - MSTB1 LTR MaLR -40 392 1 554 253 121 11 chr5 191898515 191898689 -7731461 - MIR SINE MIR -51 211 19 216 328 0 0 chr5 191898774 191898832 -7731318 + CT-rich Low_complexity Low_complexity 2 59 0 2298 91 3 10 chr5 191898918 191899214 -7730936 + AluSx SINE Alu 11 304 -8 1359 64 6 0 chr5 191899533 191899704 -7730446 + L1PA3 LINE L1 5979 6150 -5 191 307 151 11 chr5 191899845 191900024 -7730126 + L2 LINE L2 2553 2756 -558 848 253 91 0 chr5 191901128 191901314 -7728836 - MER58A DNA MER1_type 0 224 22 386 267 28 72 chr5 191901516 191901589 -7728561 + MER20 DNA MER1_type 31 106 -113 2375 93 48 31 chr5 191901589 191901943 -7728207 - THE1B LTR MaLR 0 364 5 386 267 28 72 chr5 191901943 191902049 -7728101 + MER20 DNA MER1_type 106 202 -17 421 265 48 14 chr5 191902909 191903056 -7727094 - MIR SINE MIR -46 216 65 303 240 106 10 chr5 191903325 191903429 -7726721 + MLT1J2 LTR MaLR 210 323 -127 243 336 128 8 chr5 191903454 191903579 -7726571 - MIR SINE MIR -121 141 2 25 31 0 0 chr5 191904188 191904220 -7725930 + AT_rich Low_complexity Low_complexity 1 32 0 479 262 98 74 chr5 191904806 191905192 -7724958 - MLT1H LTR MaLR 0 549 42 745 315 36 36 chr5 191905630 191906236 -7723914 - L2 LINE L2 -5 3308 2604 356 271 21 0 chr5 191906290 191906386 -7723764 - MLT1J1 LTR MaLR -123 323 226 1494 181 62 52 chr5 191907225 191907611 -7722539 - MLT1B LTR MaLR 0 390 1 21 36 0 0 chr5 191908578 191908606 -7721544 + AT_rich Low_complexity Low_complexity 1 28 0 336 179 12 71 chr5 191908606 191908690 -7721460 + MLT1J2 LTR MaLR 372 450 0 * 561 211 74 0 chr5 191908690 191908861 -7721289 - MER113 DNA MER1_type? -337 184 1 1427 245 68 74 chr5 191909121 191909770 -7720380 + Charlie8 DNA MER1_type 29 673 -1744 237 252 94 44 chr5 191910487 191910646 -7719504 + MIR SINE MIR 53 219 -43 316 179 15 15 chr5 191910934 191911001 -7719149 - MIR SINE MIR -109 153 87 4142 152 36 76 chr5 191911420 191912282 -7717868 + L1MB3 LINE L1 5326 6152 -31 2240 95 3 14 chr5 191912282 191912576 -7717574 - AluSg SINE Alu -19 291 1 4142 152 36 76 chr5 191912576 191912607 -7717543 + L1MB3 LINE L1 6152 6183 0 234 0 0 0 chr5 191912860 191912886 -7717264 + (A)n Simple_repeat Simple_repeat 1 26 0 291 364 23 27 chr5 191913736 191913997 -7716153 - MER102a DNA MER1_type 0 330 71 1742 170 0 4 chr5 191914013 191914290 -7715860 - AluJo SINE Alu -36 276 1 228 35 0 0 chr5 191914422 191914451 -7715699 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 605 191 0 0 chr5 191915593 191915708 -7714442 + L1MB2 LINE L1 5502 5616 -567 * 3576 32 0 3 chr5 191915706 191916242 -7713908 + L1P2 LINE L1 5140 5674 -480 30 45 0 0 chr5 191916609 191916653 -7713497 + AT_rich Low_complexity Low_complexity 1 44 0 1397 173 0 0 chr5 191916655 191916892 -7713258 + L1MB2 LINE L1 5595 5831 -340 1368 174 23 27 chr5 191916892 191917151 -7712999 + AluJb SINE Alu 1 258 -54 1490 140 26 4 chr5 191917157 191917421 -7712729 + L1MB2 LINE L1 5902 6171 0 296 262 16 0 chr5 191917807 191918131 -7712019 + (TA)n Simple_repeat Simple_repeat 1 329 0 310 246 56 79 chr5 191918293 191918320 -7711830 - MIR SINE MIR -66 142 116 2904 80 0 0 chr5 191918320 191918684 -7711466 + THE1B LTR MaLR 1 364 0 310 246 56 79 chr5 191918684 191918782 -7711368 - MIR SINE MIR -92 116 20 804 222 39 0 chr5 191918790 191918970 -7711180 - MER5A DNA MER1_type 0 189 3 2306 212 73 9 chr5 191919422 191919956 -7710194 + MER90 LTR ERV1 8 575 0 220 340 44 38 chr5 191920555 191920714 -7709436 - MIR SINE MIR -29 233 74 316 220 55 0 chr5 191921754 191921845 -7708305 + MER53 DNA DNA 88 183 -6 273 223 53 32 chr5 191921762 191921856 -7708294 - MER53 DNA DNA -88 101 6 * 2049 122 3 10 chr5 191921932 191922249 -7707901 - AluSp SINE Alu 0 315 1 2691 244 53 17 chr5 191922486 191923671 -7706479 + L1MCb LINE L1 985 2488 -4257 241 293 91 23 chr5 191924692 191924826 -7705324 + MIR SINE MIR 16 156 -62 245 281 0 0 chr5 191925345 191925409 -7704741 + MIR SINE MIR 117 180 -82 564 305 214 18 chr5 191925961 191926415 -7703735 + L2 LINE L2 2777 3313 0 189 0 0 0 chr5 191926716 191926737 -7703413 + (A)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr5 191927807 191927828 -7702322 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr5 191927890 191927935 -7702215 + AT_rich Low_complexity Low_complexity 1 45 0 973 228 78 110 chr5 191927940 191928075 -7702075 - HAL1 LINE L1 -91 2416 2278 2121 116 3 35 chr5 191928075 191928394 -7701756 - AluSx SINE Alu -3 309 1 973 228 78 110 chr5 191928394 191928746 -7701404 - HAL1 LINE L1 -229 2278 1949 2295 91 0 3 chr5 191928746 191929042 -7701108 - AluSx SINE Alu -17 295 1 973 228 78 110 chr5 191929042 191929155 -7700995 - HAL1 LINE L1 -558 1949 1834 1771 239 11 48 chr5 191929158 191929697 -7700453 + MER65B LTR ERV1 4 522 -9 1749 180 108 36 chr5 191930431 191930876 -7699274 + MER34 LTR ERV1 38 514 -28 240 86 0 0 chr5 191930941 191930976 -7699174 + (TATG)n Simple_repeat Simple_repeat 2 36 0 436 250 88 71 chr5 191931036 191931568 -7698582 + MER31-int LTR ERV1 1537 3048 -2846 1181 189 0 9 chr5 191931591 191931803 -7698347 - MER6B DNA MER2_type 0 210 1 1388 206 49 0 chr5 191931931 191932198 -7697952 + AluJo SINE Alu 23 302 -10 338 238 73 7 chr5 191932202 191932353 -7697797 + MER31-int LTR ERV1 2334 2494 -2377 22 35 0 0 chr5 191932432 191932461 -7697689 + AT_rich Low_complexity Low_complexity 1 29 0 546 197 16 102 chr5 191932571 191932815 -7697335 + MER31-int LTR ERV1 3729 3951 -2647 551 215 57 83 chr5 191932840 191933090 -7697060 + MER31-int LTR ERV1 2626 4355 -1908 902 315 91 21 chr5 191933108 191933590 -7696560 - HAL1 LINE L1 -1991 516 1 2466 49 0 0 chr5 191933625 191933956 -7696194 - AluY SINE Alu 0 331 1 234 271 71 0 chr5 191935751 191935821 -7694329 - MIR SINE MIR -70 192 118 189 200 44 0 chr5 191935888 191935933 -7694217 - MIR SINE MIR -157 105 59 1974 134 156 11 chr5 191936031 191936403 -7693747 + MSTA LTR MaLR 3 428 0 232 324 83 56 chr5 191936539 191936647 -7693503 - L2 LINE L2 -40 3232 3122 473 191 85 0 chr5 191936685 191936779 -7693371 - MER81 DNA DNA 0 114 13 224 310 106 28 chr5 191937209 191937351 -7692799 + MIR SINE MIR 73 225 -37 247 275 38 12 chr5 191937404 191937484 -7692666 - MLT1K LTR MaLR -22 566 485 317 127 0 28 chr5 191937566 191937637 -7692513 + (TCTCTG)n Simple_repeat Simple_repeat 2 70 0 2560 164 16 11 chr5 191937665 191938104 -7692046 + MER65A LTR ERV1 5 445 0 2183 88 46 3 chr5 191938199 191938484 -7691666 - AluSq SINE Alu -16 297 1 6922 190 56 76 chr5 191938489 191940242 -7689908 + MER65A-int LTR ERV1 83 1869 -3922 2362 99 3 0 chr5 191940242 191940546 -7689604 - AluSp SINE Alu 0 313 9 6922 190 56 76 chr5 191940546 191940914 -7689236 + MER65A-int LTR ERV1 1869 2243 -3548 2112 107 10 3 chr5 191940914 191941205 -7688945 + AluSg SINE Alu 5 297 -13 6922 190 56 76 chr5 191941205 191942086 -7688064 + MER65A-int LTR ERV1 2243 3433 -2358 402 175 0 0 chr5 191942099 191942179 -7687971 + CT-rich Low_complexity Low_complexity 4 83 0 2156 118 7 0 chr5 191942196 191942483 -7687667 - AluSc SINE Alu -20 289 1 1798 174 31 0 chr5 191942528 191942815 -7687335 - AluSx SINE Alu -16 296 1 287 167 0 0 chr5 191942956 191943004 -7687146 + MER65A-int LTR ERV1 2429 2476 -4282 814 149 96 48 chr5 191943122 191943310 -7686840 + MER65A-int LTR ERV1 3536 3732 -2866 677 151 7 36 chr5 191943388 191943527 -7686623 + MER65A-int LTR ERV1 3731 3865 -2733 2559 231 83 87 chr5 191943545 191944665 -7685485 + MER65A-int LTR ERV1 2480 3596 -1340 1942 107 0 4 chr5 191944665 191944928 -7685222 - AluSg SINE Alu -12 298 37 2559 231 83 87 chr5 191944928 191945132 -7685018 + MER65A-int LTR ERV1 3596 3799 -1137 351 73 127 18 chr5 191945246 191945301 -7684849 + MER65A-int LTR ERV1 5337 5397 -934 853 215 24 56 chr5 191945310 191945528 -7684622 + MER65A-int LTR ERV1 3607 4580 -1006 660 248 13 2 chr5 191945525 191945749 -7684401 + MER65A-int LTR ERV1 3868 4128 -743 * 2495 242 48 11 chr5 191945758 191946202 -7683948 + MER65A-int LTR ERV1 4242 4715 -156 2321 109 0 0 chr5 191946202 191946506 -7683644 - AluSx SINE Alu -8 304 1 2495 242 48 11 chr5 191946506 191946669 -7683481 + MER65A-int LTR ERV1 4715 4871 0 2853 149 5 13 chr5 191946669 191947118 -7683032 + MER65A LTR ERV1 1 445 0 396 195 13 33 chr5 191947119 191947418 -7682732 + (TCTCTG)n Simple_repeat Simple_repeat 1 293 0 279 278 75 97 chr5 191947420 191947717 -7682433 - MLT1K LTR MaLR -158 430 141 393 263 30 23 chr5 191947717 191947850 -7682300 + MER94 DNA DNA 1 134 0 196 199 156 121 chr5 191948368 191948509 -7681641 + MIR SINE MIR 2 147 -115 455 284 193 0 chr5 191949076 191949273 -7680877 - MIR SINE MIR -26 236 2 236 315 65 11 chr5 191949397 191949489 -7680661 - L2 LINE L2 -42 3230 3134 191 383 50 8 chr5 191949781 191949901 -7680249 + MIR SINE MIR 20 144 -118 1667 215 3 3 chr5 191949904 191950216 -7679934 - L1MC/D LINE L1 -591 5768 5457 433 141 11 43 chr5 191950216 191950308 -7679842 - MLT2C2 LTR ERVL -1 463 375 314 26 0 0 chr5 191950308 191950346 -7679804 - L1MC/D LINE L1 -928 5431 5394 * 2544 187 44 42 chr5 191950345 191950503 -7679647 + L1MD2 LINE L1 5785 5941 -418 2126 199 18 78 chr5 191950503 191951056 -7679094 + MLT2B1 LTR ERVL 1 520 0 2544 187 44 42 chr5 191951056 191951261 -7678889 + L1MD2 LINE L1 5941 6144 -215 198 91 0 0 chr5 191951261 191951294 -7678856 + (CA)n Simple_repeat Simple_repeat 2 34 0 2544 187 44 42 chr5 191951294 191951501 -7678649 + L1MD2 LINE L1 6144 6357 -2 220 229 0 0 chr5 191951779 191951827 -7678323 + (TA)n Simple_repeat Simple_repeat 1 48 0 4308 42 6 0 chr5 191952331 191952826 -7677324 - L1PA4 LINE L1 0 6155 5658 3273 31 12 43 chr5 191952826 191953403 -7676747 + L1PA4 LINE L1 5110 5666 -489 4104 209 73 40 chr5 191953608 191954054 -7676096 + MER45B DNA AcHobo 3 433 -1148 738 53 0 0 chr5 191954054 191954149 -7676001 + (TA)n Simple_repeat Simple_repeat 1 95 0 2404 77 7 0 chr5 191954149 191954448 -7675702 - AluY SINE Alu -10 301 1 4104 209 73 40 chr5 191954448 191955005 -7675145 + MER45B DNA AcHobo 432 1040 0 205 186 23 0 chr5 191955232 191955275 -7674875 + (TG)n Simple_repeat Simple_repeat 2 45 0 1386 268 50 24 chr5 191955536 191955958 -7674192 + MLT1J1 LTR MaLR 6 438 -8 770 335 21 0 chr5 191956858 191957100 -7673050 + MIR SINE MIR 15 261 -1 430 335 60 17 chr5 191957653 191957886 -7672264 + MIR SINE MIR 9 251 -11 1752 190 50 3 chr5 191958460 191958781 -7671369 + MLT1B LTR MaLR 1 336 -54 2186 106 0 20 chr5 191958783 191959084 -7671066 - AluSx SINE Alu -17 295 1 281 105 0 0 chr5 191959355 191959393 -7670757 - MLT2C1 LTR ERVL -9 388 351 258 164 0 33 chr5 191959405 191959466 -7670684 + LOR1-int LTR ERV1 854 912 -7208 1407 220 22 40 chr5 191959467 191959863 -7670287 - MLT2B1 LTR ERVL -68 452 11 227 315 31 15 chr5 191960196 191960326 -7669824 - L2 LINE L2 -190 3082 2951 366 23 0 0 chr5 191960551 191960594 -7669556 + (GA)n Simple_repeat Simple_repeat 2 44 0 1603 179 92 38 chr5 191960654 191961000 -7669150 - MLT1A1 LTR MaLR 0 365 1 404 296 0 0 chr5 191961420 191961518 -7668632 + L2 LINE L2 3216 3313 0 448 116 0 70 chr5 191961846 191961932 -7668218 + L1PB4 LINE L1 6075 6154 -2 7362 98 5 16 chr5 191962062 191963138 -7667012 - L1P LINE L1 -758 5388 4325 2177 82 50 10 chr5 191963138 191963429 -7666721 + L1PA8A LINE L1 5816 6130 -1 673 237 68 44 chr5 191963438 191963687 -7666463 - MIR SINE MIR 0 262 8 717 304 18 9 chr5 191964180 191964407 -7665743 + MIR SINE MIR 8 236 -26 255 250 50 70 chr5 191964492 191964592 -7665558 + MLT1L LTR MaLR 506 603 -12 46 62 0 0 chr5 191965839 191965920 -7664230 + AT_rich Low_complexity Low_complexity 1 81 0 325 204 10 19 chr5 191966086 191966189 -7663961 + (CAT)n Simple_repeat Simple_repeat 1 102 0 234 288 104 32 chr5 191966194 191966319 -7663831 + MIR SINE MIR 59 192 -70 2419 87 0 7 chr5 191966419 191966729 -7663421 - AluSc SINE Alu -1 308 1 258 316 0 82 chr5 191966831 191966929 -7663221 + MIR SINE MIR 22 111 -97 399 315 123 6 chr5 191966956 191967118 -7663032 + MER5A DNA MER1_type 3 183 -6 256 314 32 8 chr5 191967350 191967474 -7662676 + HAL1b LINE L1 482 608 -740 2287 146 24 0 chr5 191967569 191967905 -7662245 - MER2 DNA MER2_type 0 344 1 1559 169 8 0 chr5 191968110 191968365 -7661785 - Tigger2 DNA MER2_type -1 2717 2461 4437 158 21 0 chr5 191968429 191969157 -7660993 - Tigger2 DNA MER2_type -1974 744 2 203 88 29 0 chr5 191969268 191969302 -7660848 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 21 57 0 0 chr5 191969321 191969356 -7660794 + AT_rich Low_complexity Low_complexity 1 35 0 525 250 25 54 chr5 191969623 191969827 -7660323 + L1MC4a LINE L1 5713 5910 -1898 922 112 26 4 chr5 191969859 191970093 -7660057 + (TGGA)n Simple_repeat Simple_repeat 1 239 0 290 294 134 25 chr5 191971265 191971466 -7658684 - MIR SINE MIR -18 244 22 247 224 289 0 chr5 191971564 191971640 -7658510 + MIR SINE MIR 49 146 -116 292 239 126 44 chr5 191972456 191972615 -7657535 + MIR SINE MIR 28 199 -63 657 295 68 8 chr5 191972667 191972901 -7657249 + MIR SINE MIR 14 261 -1 1778 176 0 17 chr5 191972923 191973224 -7656926 + AluJo SINE Alu 1 296 -16 261 213 40 0 chr5 191973388 191973463 -7656687 - MER69 DNA AcHobo -70 2456 2379 4164 212 68 65 chr5 191973472 191974580 -7655570 - MER21B-int LTR ERV1 -875 3316 2206 1783 234 30 64 chr5 191974577 191975013 -7655137 - MER21B-int LTR ERV1 -2088 2103 1683 * 778 194 0 86 chr5 191975099 191975274 -7654876 - MER21B-int LTR ERV1 -2394 1797 1638 1286 224 49 14 chr5 191975342 191975702 -7654448 - MER21B-int LTR ERV1 -2225 4533 1343 1178 245 76 3 chr5 191975917 191976207 -7653943 - MER21B-int LTR ERV1 -3868 323 13 1876 262 111 40 chr5 191976250 191976933 -7653217 - MER21B LTR ERV1 -125 738 7 923 169 114 65 chr5 191976939 191977174 -7652976 - MER69 DNA AcHobo -160 2366 2111 2321 117 0 0 chr5 191977174 191977483 -7652667 - AluSg SINE Alu -1 309 1 923 169 114 65 chr5 191977483 191977555 -7652595 - MER69 DNA AcHobo -415 2111 2044 1518 283 64 14 chr5 191977581 191978094 -7652056 - MER69 DNA AcHobo -658 568 30 333 213 0 0 chr5 191978142 191978203 -7651947 - MER97b DNA MER1_type? -874 179 119 951 224 0 0 chr5 191978224 191978403 -7651747 - MER97b DNA MER1_type? -874 179 1 240 135 0 0 chr5 191978403 191978439 -7651711 - MER69 DNA AcHobo -2489 37 2 568 296 0 55 chr5 191978553 191978752 -7651398 + MIR SINE MIR 3 190 -72 292 324 173 11 chr5 191978782 191978961 -7651189 - L2 LINE L2 -372 2942 2735 825 251 57 122 chr5 191979069 191979522 -7650628 + MER110 LTR ERV1 80 484 0 1192 56 0 7 chr5 191979531 191979674 -7650476 + L1PA3 LINE L1 6011 6152 -3 187 318 92 99 chr5 191980091 191980187 -7649963 - L2 LINE L2 0 3272 3177 2171 100 3 3 chr5 191980187 191980488 -7649662 + AluY SINE Alu 1 301 -10 187 318 92 99 chr5 191980488 191980674 -7649476 - L2 LINE L2 -95 3177 2992 2160 92 0 7 chr5 191980727 191981008 -7649142 + AluSp SINE Alu 2 280 -33 354 98 0 0 chr5 191981011 191981062 -7649088 + (GGGGA)n Simple_repeat Simple_repeat 5 55 0 195 129 0 0 chr5 191981182 191981213 -7648937 + (GGGA)n Simple_repeat Simple_repeat 1 31 0 299 314 15 53 chr5 191982306 191982501 -7647649 + MIR SINE MIR 5 193 -69 659 241 44 57 chr5 191982543 191982771 -7647379 - MIR SINE MIR -10 252 28 842 274 73 22 chr5 191982857 191983215 -7646935 - L1ME1 LINE L1 0 6166 5791 327 278 65 19 chr5 191984687 191984795 -7645355 + Charlie8 DNA MER1_type 89 201 -2216 336 299 147 32 chr5 191986418 191986732 -7643418 - L1ME4a LINE L1 -27 6094 5745 1719 179 25 0 chr5 191986772 191987057 -7643093 - AluJo SINE Alu -14 298 7 1155 232 109 68 chr5 191987163 191987215 -7642935 - MLT1C LTR MaLR -4 463 415 3699 139 4 13 chr5 191987215 191987747 -7642403 - MER1A DNA MER1_type 0 527 1 1155 232 109 68 chr5 191987747 191988133 -7642017 - MLT1C LTR MaLR -52 415 7 394 289 20 71 chr5 191988845 191989098 -7641052 + L1M4 LINE L1 3865 4104 -2042 1876 209 43 3 chr5 191989234 191989583 -7640567 + MLT1A1 LTR MaLR 3 365 0 368 240 31 101 chr5 191989596 191989725 -7640425 - L2 LINE L2 0 3313 3194 2097 96 3 61 chr5 191989895 191990207 -7639943 + AluSx SINE Alu 1 294 -18 233 228 22 76 chr5 191990236 191990328 -7639822 - MIR SINE MIR -71 191 105 266 233 112 17 chr5 191991039 191991155 -7638995 - L1ME4a LINE L1 -30 6091 5965 373 210 193 8 chr5 191991285 191991404 -7638746 + MIR SINE MIR 110 250 -12 1651 225 31 5 chr5 191992706 191993097 -7637053 - L1MD1 LINE L1 -210 6032 5632 1631 265 102 7 chr5 191993155 191993751 -7636399 + L1M4 LINE L1 4613 5265 -881 414 0 0 0 chr5 191993751 191993797 -7636353 + (TA)n Simple_repeat Simple_repeat 2 47 0 3716 258 50 14 chr5 191993812 191995363 -7634787 + L1MEc LINE L1 1947 3515 -2700 262 300 47 26 chr5 191995424 191995614 -7634536 + L1ME3A LINE L1 2455 2648 -3892 429 305 82 38 chr5 191995637 191996115 -7634035 + L1ME3A LINE L1 4898 5396 -1144 2299 167 167 0 chr5 191996168 191996606 -7633544 + LTR53 LTR ERVL 9 519 0 757 194 74 6 chr5 191996629 191996804 -7633346 - MER53 DNA DNA -1 188 2 454 222 122 72 chr5 191996807 191996987 -7633163 + MER20 DNA MER1_type 31 219 0 400 290 116 58 chr5 191997264 191997658 -7632492 + L1ME3A LINE L1 5648 6087 -477 1844 147 93 9 chr5 191997658 191997991 -7632159 - MER46B DNA MER2_type 0 236 1 400 290 116 58 chr5 191997991 191998165 -7631985 + L1ME3A LINE L1 6087 6249 -315 2185 97 37 0 chr5 191999304 191999603 -7630547 - AluY SINE Alu -1 310 1 183 317 0 0 chr5 191999695 191999755 -7630395 + MIR SINE MIR 184 243 -19 294 270 270 7 chr5 191999778 191999926 -7630224 - MIR SINE MIR -29 233 47 270 0 0 0 chr5 192000788 192000818 -7629332 + (TTA)n Simple_repeat Simple_repeat 3 32 0 8119 25 0 0 chr5 192000818 192002469 -7627681 - L1PA3 LINE L1 -18 6137 4493 12497 25 0 1 chr5 192003859 192005673 -7624477 - L1PA3 LINE L1 -386 5769 3957 3434 20 8 18 chr5 192005673 192006059 -7624091 + L1PA3 LINE L1 5767 6155 0 397 241 89 42 chr5 192006814 192007005 -7623145 - L2 LINE L2 0 3313 3114 3551 232 52 32 chr5 192007082 192007318 -7622832 + L1MC3 LINE L1 1 231 -6149 1887 221 24 0 chr5 192007318 192007699 -7622451 + MLT1B LTR MaLR 1 390 0 3551 232 52 32 chr5 192007699 192008942 -7621208 + L1MC3 LINE L1 231 1529 -4851 228 217 0 0 chr5 192009030 192009090 -7621060 + L1MC4 LINE L1 6644 6703 -1339 189 211 0 0 chr5 192009099 192009156 -7620994 + (TA)n Simple_repeat Simple_repeat 2 58 0 8702 245 59 33 chr5 192009201 192009641 -7620509 + L1MC3 LINE L1 1752 2179 -4385 2183 138 12 6 chr5 192009641 192009968 -7620182 - L1PA15 LINE L1 -2 6163 5835 8702 245 59 33 chr5 192009968 192011957 -7618193 + L1MC3 LINE L1 2179 4279 -2285 1804 135 38 24 chr5 192011957 192012245 -7617905 + AluSx SINE Alu 2 293 -19 8702 245 59 33 chr5 192012245 192013434 -7616716 + L1MC3 LINE L1 4279 5436 -1128 3881 67 5 10 chr5 192013453 192014039 -7616111 + MER11A LTR ERVK 1 639 -432 8850 189 77 21 chr5 192014040 192015247 -7614903 + L1MC3 LINE L1 5848 7208 -995 1887 140 48 0 chr5 192015247 192015539 -7614611 - AluSx SINE Alu -6 306 1 8850 189 77 21 chr5 192015539 192016273 -7613877 + L1MC3 LINE L1 7208 7899 -304 798 101 0 0 chr5 192016278 192016377 -7613773 + AluS SINE Alu 2 100 -213 267 208 200 58 chr5 192016398 192016518 -7613632 + L2 LINE L2 3136 3272 0 187 389 14 0 chr5 192016890 192016962 -7613188 + MIR SINE MIR 21 93 -169 250 329 27 83 chr5 192016975 192017182 -7612968 + MIR SINE MIR 17 212 -50 344 245 32 77 chr5 192017258 192017413 -7612737 - MER103 DNA DNA -7 159 12 344 317 52 34 chr5 192017629 192017657 -7612493 - MIR3 SINE MIR -14 248 222 1883 126 27 40 chr5 192017657 192017817 -7612333 - AluSq SINE Alu -16 297 141 2443 93 7 0 chr5 192017817 192018119 -7612031 - AluSx SINE Alu -8 304 1 1883 126 27 40 chr5 192018119 192018259 -7611891 - AluSq SINE Alu -172 141 1 344 317 52 34 chr5 192018259 192018466 -7611684 - MIR3 SINE MIR -40 222 11 694 265 71 39 chr5 192018930 192019056 -7611094 + L1MEc LINE L1 789 910 -5295 401 103 0 81 chr5 192019056 192019143 -7611007 + L1PA4 LINE L1 6073 6152 -3 694 265 71 39 chr5 192019143 192019668 -7610482 + L1MEc LINE L1 910 1336 -4869 40 21 0 0 chr5 192020012 192020059 -7610091 + AT_rich Low_complexity Low_complexity 1 47 0 408 266 0 0 chr5 192020137 192020231 -7609919 + Charlie7 DNA MER1_type 6 99 -2513 349 265 37 19 chr5 192020236 192020398 -7609752 + Charlie7 DNA MER1_type 2447 2611 -1 1352 129 35 39 chr5 192020461 192020693 -7609457 + MER44D DNA MER2_type 1 501 -108 233 323 0 0 chr5 192021281 192021346 -7608804 - L2 LINE L2 -5 3308 3244 451 271 92 46 chr5 192021364 192021582 -7608568 - MIR SINE MIR -4 258 31 316 336 120 31 chr5 192021627 192022062 -7608088 - L2 LINE L2 -88 3184 2700 243 193 134 112 chr5 192023675 192023871 -7606279 - MLT1L LTR MaLR -239 376 70 2131 205 0 3 chr5 192024181 192024547 -7605603 + MLT1A1 LTR MaLR 1 365 0 647 188 0 53 chr5 192024660 192024793 -7605357 + FLAM_A SINE Alu 1 126 -7 631 282 53 48 chr5 192025397 192025624 -7604526 + MIR SINE MIR 3 230 -32 211 211 0 0 chr5 192025969 192026007 -7604143 - MIR SINE MIR -3 259 222 1026 238 53 0 chr5 192026008 192026235 -7603915 + MER58 DNA MER1_type 1 239 -102 278 210 48 16 chr5 192026232 192026294 -7603856 + MER58 DNA MER1_type 2357 2420 0 * 232 259 35 24 chr5 192026359 192026444 -7603706 - MIR SINE MIR -123 139 54 1522 260 64 21 chr5 192027212 192027682 -7602468 + MLT1J LTR MaLR 22 511 0 381 272 26 18 chr5 192027682 192027796 -7602354 - MIR SINE MIR -75 133 19 276 213 0 0 chr5 192027813 192027860 -7602290 - MIR SINE MIR 0 262 216 502 297 103 15 chr5 192027869 192028064 -7602086 + MIR SINE MIR 39 250 -12 196 298 157 25 chr5 192028192 192028313 -7601837 - L2 LINE L2 0 3272 3136 412 265 85 32 chr5 192028772 192028961 -7601189 + MIR SINE MIR 12 210 -52 2213 109 7 7 chr5 192029716 192030020 -7600130 - AluSc SINE Alu -5 304 1 431 261 23 8 chr5 192030344 192030474 -7599676 - MIR SINE MIR -8 254 123 275 292 153 15 chr5 192030796 192030933 -7599217 - L2 LINE L2 -519 2795 2640 244 289 72 0 chr5 192031388 192031471 -7598679 - MIR SINE MIR 0 262 174 933 224 11 0 chr5 192031486 192031669 -7598481 + MER82 DNA MER2_type 1 185 -468 2203 255 27 8 chr5 192031670 192032196 -7597954 + MER82 DNA MER2_type 116 651 -2 414 272 19 51 chr5 192032197 192032355 -7597795 - MIR SINE MIR -104 158 6 548 357 50 4 chr5 192033534 192033772 -7596378 - MIR SINE MIR -1 261 13 865 285 12 12 chr5 192035081 192035323 -7594827 - MIR SINE MIR -1 261 20 801 119 45 22 chr5 192035481 192035615 -7594535 - MSTB1 LTR MaLR 0 432 296 319 260 139 76 chr5 192035781 192036004 -7594146 + LTR16A1 LTR ERVL 52 288 -169 2340 74 9 49 chr5 192036751 192037075 -7593075 - AluY SINE Alu 0 311 1 239 276 37 10 chr5 192037595 192037708 -7592442 - MIR SINE MIR -63 145 76 426 269 161 0 chr5 192038203 192038333 -7591817 - MIR3 SINE MIR -20 188 38 849 130 19 0 chr5 192038870 192039032 -7591118 + (TCCA)n Simple_repeat Simple_repeat 3 167 0 201 74 0 0 chr5 192039068 192039095 -7591055 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 901 261 119 41 chr5 192039861 192041360 -7588790 - L1MC5 LINE L1 -747 5399 5438 2108 107 21 0 chr5 192041360 192041649 -7588501 + AluSc SINE Alu 1 295 -14 901 261 119 41 chr5 192041649 192042394 -7587756 - L1MC5 LINE L1 -707 5439 4754 799 268 131 40 chr5 192042405 192042857 -7587293 + LTR33 LTR ERVL 10 502 -19 259 190 0 40 chr5 192042923 192043023 -7587127 + (TCTA)n Simple_repeat Simple_repeat 1 96 0 3551 196 50 31 chr5 192043505 192044365 -7585785 - L1MB8 LINE L1 -1 6177 5285 1376 188 48 41 chr5 192044365 192044657 -7585493 + AluJo SINE Alu 1 294 -18 3551 196 50 31 chr5 192044657 192045135 -7585015 - L1MB8 LINE L1 -893 5285 4818 2120 162 63 48 chr5 192045278 192045754 -7584396 - LTR49 LTR ERV1 -24 571 89 2237 147 48 28 chr5 192045754 192045975 -7584175 - LTR49-int LTR ERV1 -879 5452 5218 2432 80 7 0 chr5 192045975 192046277 -7583873 + AluY SINE Alu 1 304 -7 2237 147 48 28 chr5 192046277 192046451 -7583699 - LTR49-int LTR ERV1 -1113 5218 5049 217 246 62 0 chr5 192047267 192047332 -7582818 + L2 LINE L2 3200 3268 -4 334 313 38 6 chr5 192047472 192047632 -7582518 - MER103 DNA DNA 0 166 2 957 325 63 35 chr5 192047946 192048374 -7581776 - MLT1K LTR MaLR -108 480 41 401 336 77 0 chr5 192048474 192048617 -7581533 - MIR SINE MIR -101 161 8 2169 119 3 28 chr5 192048689 192049009 -7581141 - AluSx SINE Alu 0 312 1 1292 256 97 33 chr5 192049636 192050152 -7579998 - MLT1H LTR MaLR 0 549 1 220 234 47 16 chr5 192050325 192050389 -7579761 + L3 LINE CR1 1384 1449 -128 438 298 144 16 chr5 192050536 192050724 -7579426 + MIR SINE MIR 48 259 -3 272 296 61 17 chr5 192050795 192050910 -7579240 + MLT1K LTR MaLR 92 211 -377 376 289 14 105 chr5 192050917 192051211 -7578939 + MLT1K LTR MaLR 150 416 -172 339 331 28 0 chr5 192051277 192051419 -7578731 - MIR SINE MIR -6 256 111 568 305 36 16 chr5 192051921 192052170 -7577980 - MIR SINE MIR 0 262 9 234 339 91 6 chr5 192052787 192052943 -7577207 - MIR SINE MIR -55 207 42 182 309 0 48 chr5 192053216 192053300 -7576850 + L2 LINE L2 2996 3075 -197 487 291 82 19 chr5 192054004 192054210 -7575940 - MIR SINE MIR -16 246 28 681 286 80 94 chr5 192054655 192055242 -7574908 - MLT1K LTR MaLR 0 588 10 1833 168 7 0 chr5 192055370 192055661 -7574489 + AluJb SINE Alu 5 297 -15 253 278 87 26 chr5 192055696 192055811 -7574339 - MIR SINE MIR -50 212 91 1745 188 16 7 chr5 192055864 192056167 -7573983 - AluJo SINE Alu -6 306 1 300 149 55 53 chr5 192056538 192056632 -7573518 + MLT1J2 LTR MaLR 381 447 -3 2172 123 17 0 chr5 192057261 192057563 -7572587 + AluSx SINE Alu 1 307 -5 2082 138 0 6 chr5 192057610 192057921 -7572229 + AluSx SINE Alu 1 309 -3 207 282 0 0 chr5 192058097 192058156 -7571994 - MIR SINE MIR -65 143 96 22 0 0 0 chr5 192058234 192058256 -7571894 + AT_rich Low_complexity Low_complexity 1 22 0 230 288 38 0 chr5 192058260 192058340 -7571810 + MIR SINE MIR 107 189 -73 252 333 0 11 chr5 192058345 192058438 -7571712 + LTR67 LTR ERVL 2 93 -464 1348 202 76 67 chr5 192058448 192058572 -7571578 - L1MB8 LINE L1 -1 6177 6056 2323 110 0 0 chr5 192058572 192058871 -7571279 - AluSx SINE Alu -13 299 1 1348 202 76 67 chr5 192058871 192059197 -7570953 - L1MB8 LINE L1 -122 6056 5721 874 211 78 78 chr5 192059201 192059495 -7570655 - MSTD LTR MaLR -2 394 101 399 188 0 0 chr5 192059511 192059575 -7570575 + LTR67 LTR ERVL 107 170 -387 606 209 225 0 chr5 192059665 192059856 -7570294 - MIR SINE MIR -12 250 17 312 217 43 11 chr5 192060136 192060228 -7569922 - MIR SINE MIR -56 152 58 240 308 82 34 chr5 192060369 192060515 -7569635 + MIR SINE MIR 28 180 -82 330 218 13 26 chr5 192060515 192060593 -7569557 - L1MB8 LINE L1 -543 5578 5502 252 0 0 0 chr5 192061447 192061475 -7568675 + (TG)n Simple_repeat Simple_repeat 2 29 0 1796 237 94 6 chr5 192062185 192062674 -7567476 + MER34 LTR ERV1 11 542 0 324 252 87 9 chr5 192063266 192063381 -7566769 + MIR SINE MIR 70 193 -69 612 100 0 0 chr5 192063433 192063513 -7566637 + MADE1 DNA Mariner 1 80 0 2356 113 3 0 chr5 192063677 192064019 -7566131 + AluSg SINE Alu 1 343 0 256 335 2 41 chr5 192064264 192064442 -7565708 - MIR3 SINE MIR -6 202 32 216 333 73 10 chr5 192064539 192064635 -7565515 + MIR SINE MIR 31 132 -130 200 348 0 17 chr5 192064714 192064829 -7565321 + MIR SINE MIR 143 255 -7 1002 256 85 56 chr5 192065389 192065805 -7564345 + MLT1K LTR MaLR 84 584 -4 699 269 97 13 chr5 192065836 192066063 -7564087 - MIR SINE MIR -14 248 3 356 0 0 22 chr5 192066817 192066862 -7563288 + (GGGGA)n Simple_repeat Simple_repeat 2 45 0 1397 125 10 0 chr5 192066906 192067098 -7563052 + AluSc SINE Alu 97 290 -19 575 138 0 0 chr5 192067128 192067215 -7562935 + Tigger1 DNA MER2_type 607 693 -1725 7913 122 20 3 chr5 192067315 192068472 -7561678 + Tigger1 DNA MER2_type 1029 2204 -214 813 116 0 8 chr5 192068469 192068590 -7561560 + Tigger1 DNA MER2_type 1896 2015 -403 * 1060 170 77 0 chr5 192068595 192068789 -7561361 + Tigger1 DNA MER2_type 2210 2418 0 232 330 128 0 chr5 192069031 192069125 -7561025 + MIR SINE MIR 46 151 -111 282 232 120 32 chr5 192069752 192069877 -7560273 - L2 LINE L2 0 3272 3137 1266 170 18 0 chr5 192069915 192070139 -7560011 - L1MA9 LINE L1 -601 5733 5506 * 1676 189 125 70 chr5 192070134 192070185 -7559965 + L1MA9 LINE L1 5737 5784 -528 820 161 0 0 chr5 192070185 192070315 -7559835 + FLAM_C SINE Alu 2 131 -2 1676 189 125 70 chr5 192070315 192070808 -7559342 + L1MA9 LINE L1 5784 6311 -1 1770 180 0 17 chr5 192070972 192071272 -7558878 + AluJb SINE Alu 1 295 -17 652 199 46 113 chr5 192071924 192072251 -7557899 + L1MC5 LINE L1 7609 7913 -48 357 272 78 34 chr5 192072329 192072535 -7557615 - MIR SINE MIR -43 219 5 364 264 84 76 chr5 192072753 192073003 -7557147 - L2 LINE L2 -338 2976 2725 2368 200 54 13 chr5 192073010 192073544 -7556606 + MER68 LTR ERV1 7 562 0 435 253 132 6 chr5 192073544 192073718 -7556432 - L2 LINE L2 -586 2728 2533 2529 75 0 3 chr5 192074906 192075214 -7554936 + AluSc SINE Alu 1 307 -2 245 244 47 23 chr5 192075339 192075425 -7554725 + MIR SINE MIR 78 165 -97 392 270 9 9 chr5 192075821 192075936 -7554214 + MIR SINE MIR 1 115 -147 2097 135 73 19 chr5 192076815 192077185 -7552965 - MLT1B LTR MaLR 0 390 1 225 203 177 13 chr5 192078027 192078106 -7552044 + MIR SINE MIR 41 132 -76 745 276 115 11 chr5 192078204 192078483 -7551667 - MLT1L LTR MaLR -13 602 295 246 191 18 0 chr5 192078676 192078731 -7551419 + MIR SINE MIR 102 156 -63 747 89 0 0 chr5 192079632 192079733 -7550417 + AluY SINE Alu 2 102 -209 1451 193 32 0 chr5 192079734 192079983 -7550167 - AluJb SINE Alu -55 257 1 641 169 0 7 chr5 192080211 192080353 -7549797 + CT-rich Low_complexity Low_complexity 2 142 0 226 351 125 30 chr5 192080733 192080901 -7549249 + MIR SINE MIR 4 187 -75 445 165 44 0 chr5 192081418 192081509 -7548641 - MIR SINE MIR -89 173 79 870 222 30 5 chr5 192081788 192081991 -7548159 - MIR SINE MIR -8 254 47 2398 93 3 0 chr5 192082071 192082371 -7547779 + AluSp SINE Alu 3 303 -10 200 264 226 31 chr5 192082414 192082573 -7547577 - MIR SINE MIR -20 242 53 2008 127 40 0 chr5 192084033 192084333 -7545817 + AluSx SINE Alu 1 312 0 742 252 115 34 chr5 192085247 192085699 -7544451 - MLT1F1 LTR MaLR 0 567 64 374 283 44 13 chr5 192086593 192086752 -7543398 - L1MC4a LINE L1 -1930 5878 5715 198 258 11 67 chr5 192087200 192087289 -7542861 + MIR SINE MIR 89 172 -90 2351 247 17 34 chr5 192087620 192088087 -7542063 + L1ME2 LINE L1 5522 5977 -187 2185 134 0 0 chr5 192088087 192088393 -7541757 + AluSx SINE Alu 6 311 -1 2351 247 17 34 chr5 192088393 192088569 -7541581 + L1ME2 LINE L1 5977 6154 -10 311 261 11 92 chr5 192088643 192088827 -7541323 + L1MC4 LINE L1 7864 8032 -10 772 246 57 28 chr5 192088858 192089069 -7541081 + MIR SINE MIR 36 252 -10 551 266 75 42 chr5 192090765 192091006 -7539144 + MIR SINE MIR 2 250 -12 1667 177 10 37 chr5 192091668 192091968 -7538182 + AluJb SINE Alu 1 292 -20 334 379 35 5 chr5 192091977 192092175 -7537975 + MIR SINE MIR 59 262 0 495 217 19 0 chr5 192092763 192092920 -7537230 + (TGGA)n Simple_repeat Simple_repeat 4 163 0 347 125 0 16 chr5 192093134 192093198 -7536952 + (GAA)n Simple_repeat Simple_repeat 1 63 0 278 311 0 0 chr5 192093974 192094064 -7536086 + MIR SINE MIR 59 148 -114 23 33 0 0 chr5 192094719 192094749 -7535401 + AT_rich Low_complexity Low_complexity 1 30 0 434 228 13 0 chr5 192094892 192094971 -7535179 + MER21B LTR ERV1 15 94 -769 2838 224 134 19 chr5 192094972 192095569 -7534581 + MER21B LTR ERV1 48 575 -288 669 0 21 32 chr5 192095569 192095663 -7534487 + (AATTG)n Simple_repeat Simple_repeat 1 93 0 2421 151 43 10 chr5 192095671 192096089 -7534061 - MSTB1 LTR MaLR 0 432 1 2838 224 134 19 chr5 192096089 192096211 -7533939 + MER21B LTR ERV1 581 860 -3 391 264 0 62 chr5 192096586 192096715 -7533435 - MER94 DNA DNA 0 134 14 359 307 8 24 chr5 192096781 192096908 -7533242 + MIR SINE MIR 21 145 -63 223 329 0 55 chr5 192096990 192097136 -7533014 + L2 LINE L2 2403 2540 -774 226 352 37 19 chr5 192097618 192097780 -7532370 + MIR3 SINE MIR 5 169 -39 2291 79 17 3 chr5 192097783 192098075 -7532075 - AluY SINE Alu -15 296 1 207 100 0 0 chr5 192099076 192099106 -7531044 + (GGA)n Simple_repeat Simple_repeat 3 32 0 184 302 87 20 chr5 192100269 192100418 -7529732 + L2 LINE L2 1705 1863 -1451 191 360 135 0 chr5 192100428 192100517 -7529633 + L2 LINE L2 3153 3253 -19 542 313 71 5 chr5 192101611 192101835 -7528315 + MIR SINE MIR 5 243 -19 299 331 0 29 chr5 192101861 192101997 -7528153 - MIR3 SINE MIR -62 146 15 433 292 47 6 chr5 192102004 192102175 -7527975 - MIR SINE MIR -1 261 84 236 233 139 12 chr5 192102253 192102339 -7527811 - MER63 DNA MER1_type 0 1062 966 * 458 196 22 11 chr5 192102331 192102423 -7527727 - MER63 DNA MER1_type -310 752 659 234 355 16 24 chr5 192102834 192102958 -7527192 - L2 LINE L2 -14 3258 3136 392 248 155 58 chr5 192103210 192103436 -7526714 + MIR SINE MIR 1 248 -14 232 303 162 7 chr5 192104528 192104670 -7525480 + MIR SINE MIR 98 261 -1 192 163 41 61 chr5 192104930 192104979 -7525171 - MIR SINE MIR -3 259 212 * 204 171 0 0 chr5 192104945 192104980 -7525170 - L2 LINE L2 -23 3290 3256 332 243 17 45 chr5 192104988 192105090 -7525060 - MIR SINE MIR -102 106 5 579 291 67 65 chr5 192105575 192105715 -7524435 + L2 LINE L2 2746 2884 -429 378 0 0 0 chr5 192105715 192105757 -7524393 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 1949 117 49 0 chr5 192105759 192106025 -7524125 - AluSg SINE Alu -31 279 1 579 291 67 65 chr5 192106025 192106438 -7523712 + L2 LINE L2 2884 3308 -5 418 324 74 51 chr5 192106496 192106832 -7523318 + L2 LINE L2 2929 3272 0 186 274 0 113 chr5 192107352 192107399 -7522751 + MIR SINE MIR 107 137 -125 2499 70 0 0 chr5 192107399 192107698 -7522452 + AluSc SINE Alu 1 299 -10 186 274 0 113 chr5 192107698 192107756 -7522394 + MIR SINE MIR 137 200 -62 374 170 52 96 chr5 192107831 192107966 -7522184 - MER113 DNA MER1_type? -135 386 258 358 241 0 43 chr5 192108209 192108221 -7521929 - MER113 DNA MER1_type? -292 229 218 471 63 0 0 chr5 192108221 192108284 -7521866 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 1825 91 0 0 chr5 192108287 192108518 -7521632 - AluSg SINE Alu -41 269 39 358 241 0 43 chr5 192108518 192108617 -7521533 - MER113 DNA MER1_type? -305 216 119 234 0 0 0 chr5 192110200 192110226 -7519924 + (A)n Simple_repeat Simple_repeat 1 26 0 338 324 46 0 chr5 192111899 192112007 -7518143 + MIR SINE MIR 31 143 -119 1129 343 113 15 chr5 192112238 192113516 -7516634 - L2 LINE L2 -4 3309 1897 316 330 54 49 chr5 192114872 192115057 -7515093 - L2 LINE L2 -173 3099 2914 405 293 57 0 chr5 192115170 192115293 -7514857 + MIR SINE MIR 103 232 -30 239 177 97 0 chr5 192115525 192115587 -7514563 - MIR SINE MIR -56 206 139 204 280 0 0 chr5 192115752 192115802 -7514348 - L2 LINE L2 0 3272 3223 729 279 46 8 chr5 192115841 192116081 -7514069 - MIR SINE MIR 0 262 14 236 288 16 32 chr5 192116495 192116620 -7513530 - L2 LINE L2 -256 3016 2894 292 303 14 21 chr5 192117404 192117549 -7512601 + MIR SINE MIR 48 191 -71 542 277 49 11 chr5 192117573 192117757 -7512393 + MIR SINE MIR 72 262 0 200 302 0 0 chr5 192117759 192117812 -7512338 + L2 LINE L2 3244 3296 -17 1448 125 0 5 chr5 192118233 192118433 -7511717 + AluSc SINE Alu 96 294 -15 194 321 107 0 chr5 192118523 192118635 -7511515 + MIR SINE MIR 31 154 -108 245 260 0 0 chr5 192119024 192119074 -7511076 + MIR SINE MIR 100 149 -59 253 312 96 24 chr5 192119927 192120052 -7510098 - L2 LINE L2 -215 3057 2924 294 257 68 19 chr5 192120087 192120207 -7509943 + MIR SINE MIR 1 136 -72 372 278 26 9 chr5 192120226 192120341 -7509809 - MER5A DNA MER1_type 0 189 73 237 287 64 0 chr5 192120861 192120955 -7509195 + MIR SINE MIR 94 193 -69 2003 195 10 4 chr5 192121022 192121475 -7508675 - MER89 LTR ERV1 -4 555 1 308 227 175 10 chr5 192121488 192121585 -7508565 - L2 LINE L2 0 3313 3201 1034 172 9 73 chr5 192122007 192122240 -7507910 - L1MA8 LINE L1 -327 5964 5747 2293 105 0 0 chr5 192122361 192122655 -7507495 + AluSg SINE Alu 1 294 -16 218 280 75 9 chr5 192122879 192122986 -7507164 + MIR SINE MIR 64 177 -85 2291 192 41 0 chr5 192123011 192123422 -7506728 - MSTC LTR MaLR 0 428 1 1259 7 14 0 chr5 192123918 192124063 -7506087 - L1PA4 LINE L1 0 6155 6009 977 32 32 0 chr5 192124063 192124189 -7505961 + L1P LINE L1 5289 5418 -737 186 133 0 0 chr5 192124268 192124298 -7505852 + (TGG)n Simple_repeat Simple_repeat 2 31 0 1803 100 0 0 chr5 192125193 192125432 -7504718 - AluSg/x SINE Alu 0 312 74 257 305 7 66 chr5 192126071 192126222 -7503928 + MIR SINE MIR 52 193 -69 591 239 43 60 chr5 192126267 192126501 -7503649 - MIR SINE MIR -10 252 23 839 274 73 22 chr5 192126583 192126941 -7503209 - L1ME1 LINE L1 0 6166 5791 321 278 65 19 chr5 192128413 192128521 -7501629 + Charlie8 DNA MER1_type 89 201 -2216 25 65 0 0 chr5 192130340 192130386 -7499764 + AT_rich Low_complexity Low_complexity 1 46 0 1733 178 25 0 chr5 192130499 192130785 -7499365 - AluJo SINE Alu -13 299 7 1145 235 109 68 chr5 192130891 192130943 -7499207 - MLT1C LTR MaLR -4 463 415 3498 139 4 13 chr5 192130943 192131475 -7498675 - MER1A DNA MER1_type 0 527 1 1145 235 109 68 chr5 192131475 192131861 -7498289 - MLT1C LTR MaLR -52 415 7 384 289 20 71 chr5 192132573 192132826 -7497324 + L1ME1 LINE L1 3865 4104 -2042 1764 209 43 3 chr5 192132962 192133311 -7496839 + MLT1A1 LTR MaLR 3 365 0 335 240 31 101 chr5 192133324 192133453 -7496697 - L2 LINE L2 0 3313 3194 2154 99 3 40 chr5 192133623 192133927 -7496223 + AluSx SINE Alu 1 293 -19 3960 241 52 11 chr5 192133931 192135116 -7495034 + L1MC/D LINE L1 3786 5018 -1128 3860 67 6 10 chr5 192135135 192135720 -7494430 + MER11A LTR ERVK 1 639 -432 1159 165 0 10 chr5 192135721 192135921 -7494229 + L1MC/D LINE L1 5430 5627 -706 352 119 33 0 chr5 192136034 192136110 -7494040 - AluS SINE Alu -239 61 2 283 348 11 0 chr5 192136264 192136353 -7493797 - MIR SINE MIR -89 119 30 232 341 0 0 chr5 192136648 192136739 -7493411 - L2 LINE L2 0 3272 3182 215 333 42 42 chr5 192136774 192136918 -7493232 + L2 LINE L2 3122 3265 -48 194 236 32 177 chr5 192136913 192137133 -7493017 - L2 LINE L2 -90 3182 2995 * 219 139 0 0 chr5 192138090 192138126 -7492024 + (TTCA)n Simple_repeat Simple_repeat 2 37 0 321 258 21 0 chr5 192138731 192138828 -7491322 + MER5A DNA MER1_type 11 109 -80 1854 171 0 0 chr5 192139122 192139409 -7490741 - AluJb SINE Alu -25 287 1 2034 241 107 31 chr5 192139606 192140298 -7489852 + L1ME1 LINE L1 4669 5307 -859 4265 152 13 0 chr5 192140298 192141000 -7489150 + L1PB4 LINE L1 5446 6156 0 2034 241 107 31 chr5 192141000 192141693 -7488457 + L1ME1 LINE L1 5307 6161 -5 529 254 30 24 chr5 192141692 192141857 -7488293 + L1MC5 LINE L1 7763 7928 -33 * 8245 174 66 20 chr5 192141849 192142603 -7487547 + L1MB3 LINE L1 5 723 -5661 2291 84 0 11 chr5 192142603 192142949 -7487201 - AluY SINE Alu 0 343 1 8245 174 66 20 chr5 192142949 192143872 -7486278 + L1MB3 LINE L1 723 1761 -4623 657 174 6 58 chr5 192143873 192144045 -7486105 + AluSx SINE Alu 2 164 -148 46 0 0 0 chr5 192144179 192144225 -7485925 + AT_rich Low_complexity Low_complexity 1 46 0 549 233 31 6 chr5 192144394 192144553 -7485597 + L1MB3 LINE L1 4163 4325 -2057 * 4485 185 45 18 chr5 192144548 192146037 -7484113 + L1MB3 LINE L1 4900 6412 -7 422 286 120 6 chr5 192146230 192146405 -7483745 - MIR SINE MIR -32 230 36 199 200 0 0 chr5 192146846 192146881 -7483269 + L2 LINE L2 2571 2605 -709 250 224 40 104 chr5 192147287 192147412 -7482738 - L2 LINE L2 -346 2967 2851 1106 300 151 16 chr5 192147968 192148827 -7481323 + L2 LINE L2 2325 3313 0 395 238 135 131 chr5 192148863 192148964 -7481186 - HAL1 LINE L1 -110 2397 2298 1856 110 18 0 chr5 192148964 192149246 -7480904 - L1MA8 LINE L1 -7 6284 5998 395 238 135 131 chr5 192149246 192149367 -7480783 - HAL1 LINE L1 -209 2298 2179 3789 44 2 11 chr5 192149367 192149840 -7480310 + L1PA3 LINE L1 5684 6152 -3 395 238 135 131 chr5 192149840 192150289 -7479861 - HAL1 LINE L1 -328 2179 1722 606 211 81 25 chr5 192150401 192150562 -7479588 - MIR SINE MIR -66 196 27 198 262 0 0 chr5 192150571 192150613 -7479537 - L2 LINE L2 -18 3254 3213 715 304 9 5 chr5 192150659 192150883 -7479267 + L3 LINE CR1 1236 1460 -117 1446 182 12 102 chr5 192150963 192151364 -7478786 + MLT1A1 LTR MaLR 1 365 0 1067 309 92 31 chr5 192152211 192152349 -7477801 - MLT1K LTR MaLR 0 588 460 372 43 0 0 chr5 192152349 192152395 -7477755 + (TC)n Simple_repeat Simple_repeat 1 46 0 483 261 27 0 chr5 192152398 192152509 -7477641 + MER81 DNA DNA 1 114 0 1067 309 92 31 chr5 192152509 192152919 -7477231 - MLT1K LTR MaLR -129 459 2 260 340 11 43 chr5 192153689 192153874 -7476276 + L2 LINE L2 2896 3074 -198 208 315 120 0 chr5 192155572 192155664 -7474486 - MIR SINE MIR -111 151 49 253 214 0 43 chr5 192155764 192155834 -7474316 - MER4-int LTR ERV1 -5433 1165 1099 521 43 43 21 chr5 192155834 192155927 -7474223 + (TAGA)n Simple_repeat Simple_repeat 4 98 0 372 317 49 12 chr5 192156430 192156594 -7473556 + MIR SINE MIR 22 191 -71 238 283 50 10 chr5 192156967 192157066 -7473084 + MIR SINE MIR 81 183 -79 525 238 14 28 chr5 192157625 192157768 -7472382 + MIR SINE MIR 37 177 -85 447 243 24 35 chr5 192157897 192158066 -7472084 + L1ME LINE L1 5604 5770 -351 439 292 37 6 chr5 192158210 192158371 -7471779 - MIR SINE MIR -10 252 87 297 284 21 11 chr5 192158578 192158673 -7471477 - MIR SINE MIR -97 111 16 209 152 0 0 chr5 192160034 192160067 -7470083 - L2 LINE L2 -17 3296 3264 1945 187 25 40 chr5 192160457 192160927 -7469223 + MLT1C LTR MaLR 3 465 -2 305 275 40 67 chr5 192161017 192161166 -7468984 + LTR16A1 LTR ERVL 4 148 -309 1621 187 47 106 chr5 192162868 192163801 -7466349 - L1PA12 LINE L1 -4137 3447 2572 204 337 12 12 chr5 192164078 192164161 -7465989 + MIR SINE MIR 47 129 -133 237 83 0 0 chr5 192164330 192164366 -7465784 + (TC)n Simple_repeat Simple_repeat 2 37 0 359 261 174 6 chr5 192165004 192165165 -7464985 + MIR SINE MIR 17 204 -58 437 162 38 0 chr5 192165325 192165430 -7464720 + Alu SINE Alu 202 310 0 2994 54 18 3 chr5 192165448 192165838 -7464312 + L1PA7 LINE L1 5759 6154 0 279 370 30 15 chr5 192165841 192166044 -7464106 + L1MC4a LINE L1 7079 7284 -524 608 248 287 12 chr5 192166641 192166972 -7463178 + MLT1K LTR MaLR 136 557 -31 21 0 0 0 chr5 192167160 192167181 -7462969 + AT_rich Low_complexity Low_complexity 1 21 0 408 222 43 19 chr5 192167363 192167525 -7462625 + (GGGTG)n Simple_repeat Simple_repeat 1 166 0 1731 241 61 29 chr5 192167980 192168673 -7461477 - L1M4 LINE L1 -2580 3390 2676 243 261 0 0 chr5 192168803 192168872 -7461278 + A-rich Low_complexity Low_complexity 1 69 0 468 286 0 54 chr5 192168959 192169144 -7461006 + GA-rich Low_complexity Low_complexity 2 176 0 601 232 63 7 chr5 192169270 192169412 -7460738 - L1MDa LINE L1 -6377 163 14 230 243 133 40 chr5 192169440 192169613 -7460537 - L1MC/D LINE L1 -2350 5458 5270 335 275 22 28 chr5 192170382 192170560 -7459590 + A-rich Low_complexity Low_complexity 2 178 0 238 283 50 10 chr5 192170985 192171084 -7459066 + MIR SINE MIR 81 183 -79 474 281 7 14 chr5 192173696 192173842 -7456308 - MIR SINE MIR -31 231 87 267 281 33 50 chr5 192174619 192174740 -7455410 - L1M4 LINE L1 -5759 132 14 278 341 218 0 chr5 192174740 192174910 -7455240 + L2 LINE L2 2874 3080 -233 2285 79 0 10 chr5 192174910 192175200 -7454950 + AluSq SINE Alu 1 287 -26 198 0 0 0 chr5 192175201 192175223 -7454927 + (CAAG)n Simple_repeat Simple_repeat 1 22 0 561 338 17 30 chr5 192176703 192176940 -7453210 + MIR SINE MIR 15 248 -14 449 139 0 12 chr5 192177054 192177140 -7453010 + (TA)n Simple_repeat Simple_repeat 2 86 0 1751 110 0 53 chr5 192177701 192178020 -7452130 - AluSx SINE Alu -10 302 1 1414 189 111 40 chr5 192179142 192179512 -7450638 + MSTD LTR MaLR 1 396 0 4667 56 0 0 chr5 192179824 192180391 -7449759 - L1PA5 LINE L1 0 6154 5588 404 167 42 0 chr5 192180470 192180542 -7449608 - FLAM_A SINE Alu -1 132 58 313 160 67 27 chr5 192181173 192181248 -7448902 - MER106B DNA MER1_type -86 973 896 235 206 16 48 chr5 192181261 192181324 -7448826 - MER106B DNA MER1_type -997 62 2 409 269 106 26 chr5 192182086 192182313 -7447837 - MLT1L LTR MaLR -24 591 347 311 367 136 0 chr5 192182729 192182898 -7447252 + MER91A DNA MER1_type 5 196 0 223 298 51 51 chr5 192183069 192183227 -7446923 - L2 LINE L2 -205 3067 2910 1991 238 35 30 chr5 192183267 192183825 -7446325 - MER77 LTR ERV1 -7 598 64 405 339 96 36 chr5 192184180 192184431 -7445719 - L2 LINE L2 -11 3261 2996 1948 91 38 4 chr5 192184561 192184825 -7445325 + AluY SINE Alu 37 309 -2 2864 55 16 0 chr5 192184853 192185216 -7444934 + L1PA7 LINE L1 5759 6127 -27 1564 158 0 98 chr5 192185535 192185870 -7444280 + AluSx SINE Alu 3 304 -8 1317 279 54 5 chr5 192186085 192186475 -7443675 + MLT1I LTR MaLR 1 409 0 2138 92 0 43 chr5 192186830 192187135 -7443015 - AluY SINE Alu -19 292 1 737 253 11 11 chr5 192187540 192187714 -7442436 + MER5B DNA MER1_type 1 174 -4 194 297 110 11 chr5 192188261 192188352 -7441798 - MIR SINE MIR -117 145 46 2081 117 57 20 chr5 192188618 192188970 -7441180 - THE1C LTR MaLR 0 375 11 1816 147 9 47 chr5 192189023 192189342 -7440808 + AluJo SINE Alu 1 307 -5 414 110 41 0 chr5 192190317 192190390 -7439760 - AluJ/FRAM SINE Alu -5 307 232 2339 105 0 13 chr5 192191590 192191905 -7438245 - AluSx SINE Alu -1 311 1 588 200 0 0 chr5 192192373 192192473 -7437677 + Tigger2 DNA MER2_type 2590 2689 -29 10159 162 26 11 chr5 192192597 192194559 -7435591 + L1P LINE L1 3230 5221 -925 2062 99 0 68 chr5 192194927 192195249 -7434901 - AluSg SINE Alu -10 300 1 181 250 83 0 chr5 192195255 192195327 -7434823 - MIR SINE MIR -9 253 176 281 303 101 20 chr5 192195436 192195536 -7434614 - MIR SINE MIR -42 166 58 25 51 0 0 chr5 192195581 192195620 -7434530 + AT_rich Low_complexity Low_complexity 1 39 0 1948 203 116 15 chr5 192196174 192196917 -7433233 + L1M4 LINE L1 1254 2110 -4273 5152 143 30 7 chr5 192196962 192197837 -7432313 - Tigger3b DNA MER2_type 0 1231 337 443 189 100 22 chr5 192197856 192197946 -7432204 - FLAM_A SINE Alu -36 106 10 1802 153 34 34 chr5 192197950 192198302 -7431848 - Tigger3(Golem) DNA MER2_type -880 2149 1 421 207 36 9 chr5 192198302 192198413 -7431737 + L1M LINE L1 5267 5380 -791 555 210 51 7 chr5 192198573 192198711 -7431439 + L1M4 LINE L1 3873 4016 -2366 895 292 43 7 chr5 192198822 192199127 -7431023 + LTR16C LTR ERVL 165 480 -11 216 247 14 27 chr5 192199761 192199834 -7430316 - L2 LINE L2 0 3272 3201 1645 244 42 73 chr5 192199877 192200397 -7429753 + MLT1E LTR MaLR 90 593 0 292 234 108 45 chr5 192200696 192200807 -7429343 + MLT1J2 LTR MaLR 44 161 -289 1323 117 11 0 chr5 192200937 192201117 -7429033 - AluSc SINE Alu -127 182 1 1023 257 77 64 chr5 192201130 192201328 -7428822 - MLT2C2 LTR ERVL -2 462 268 1350 117 21 46 chr5 192201328 192201567 -7428583 - L1MA4 LINE L1 0 6300 6068 1023 257 77 64 chr5 192201567 192201824 -7428326 - MLT2C2 LTR ERVL -196 268 1 901 210 59 151 chr5 192202432 192202875 -7427275 - MLT1E LTR MaLR -102 491 90 1096 157 140 8 chr5 192202937 192203006 -7427144 + THE1C LTR MaLR 110 169 -206 423 0 0 0 chr5 192203006 192203053 -7427097 + (TC)n Simple_repeat Simple_repeat 1 47 0 1096 157 140 8 chr5 192203053 192203218 -7426932 + THE1C LTR MaLR 169 375 0 408 358 11 5 chr5 192203623 192203813 -7426337 - MIR SINE MIR -70 192 2 1352 208 171 73 chr5 192204234 192204797 -7425353 + MLT1E3 LTR MaLR 52 624 0 1089 280 134 14 chr5 192205409 192205841 -7424309 + LTR16C LTR ERVL 8 491 0 748 319 97 12 chr5 192206070 192206409 -7423741 + MLT1I LTR MaLR 42 409 0 531 281 20 46 chr5 192206924 192207120 -7423030 - LTR67 LTR ERVL -41 516 326 2272 148 82 25 chr5 192207135 192207540 -7422610 + MSTC LTR MaLR 1 428 0 296 318 103 52 chr5 192207940 192208173 -7421977 - LTR67 LTR ERVL -304 253 9 1891 165 19 48 chr5 192208575 192208951 -7421199 + MLT1A1 LTR MaLR 1 365 0 369 314 58 0 chr5 192209609 192209765 -7420385 + MIR SINE MIR 54 218 -44 223 241 81 0 chr5 192210694 192210781 -7419369 - L2 LINE L2 -5 3267 3174 257 153 10 163 chr5 192210817 192210915 -7419235 - L2 LINE L2 -35 3278 3196 2484 112 21 19 chr5 192211748 192212122 -7418028 + THE1C LTR MaLR 1 375 0 354 281 42 24 chr5 192212145 192212312 -7417838 - L1ME4a LINE L1 -5 6116 5947 458 221 125 0 chr5 192212737 192212882 -7417268 - MIR SINE MIR -11 251 88 247 176 0 0 chr5 192212904 192212955 -7417195 + MIR SINE MIR 85 135 -73 2101 100 3 58 chr5 192213709 192214020 -7416130 - AluSx SINE Alu -18 294 1 1652 173 21 28 chr5 192215290 192215579 -7414571 + AluJb SINE Alu 2 288 -24 656 24 12 0 chr5 192215592 192215674 -7414476 + (GGAAA)n Simple_repeat Simple_repeat 1 83 0 514 241 0 0 chr5 192216607 192216723 -7413427 - MIR SINE MIR -70 192 77 180 313 94 21 chr5 192218264 192218360 -7411790 + MIR SINE MIR 73 175 -87 1979 138 0 0 chr5 192219332 192219650 -7410500 + AluSx SINE Alu 1 318 0 309 291 26 26 chr5 192219668 192219785 -7410365 + MER5A DNA MER1_type 52 168 -21 837 281 29 0 chr5 192220438 192220684 -7409466 + MIR SINE MIR 9 261 -1 325 242 137 24 chr5 192220685 192220809 -7409341 - MIR SINE MIR -65 197 60 408 307 71 0 chr5 192220906 192221118 -7409032 + MIR SINE MIR 16 242 -20 2595 52 0 7 chr5 192221166 192221475 -7408675 + AluY SINE Alu 1 307 -4 406 139 42 0 chr5 192221664 192221736 -7408414 - MER58 DNA MER1_type -1 2419 2345 280 254 238 8 chr5 192222611 192222737 -7407413 + MIR SINE MIR 37 191 -71 298 304 71 53 chr5 192222791 192223169 -7406981 - L2 LINE L2 -5 3308 2924 1717 184 97 53 chr5 192223169 192223621 -7406529 + LTR8A LTR ERV1 256 727 0 2390 158 40 24 chr5 192223632 192224057 -7406093 + MSTB1 LTR MaLR 1 432 0 275 189 0 27 chr5 192224107 192224181 -7405969 + CT-rich Low_complexity Low_complexity 3 74 0 785 215 41 114 chr5 192224181 192224400 -7405750 + MLT1A2 LTR MaLR 194 374 0 195 345 35 0 chr5 192224516 192224603 -7405547 + L2 LINE L2 3134 3223 -49 644 273 38 5 chr5 192224617 192224826 -7405324 + L2 LINE L2 3091 3306 -7 885 109 31 0 chr5 192225309 192225437 -7404713 - AluSp SINE Alu -181 132 1 1197 84 26 0 chr5 192225468 192225623 -7404527 + AluSg/x SINE Alu 135 293 -19 2036 129 14 3 chr5 192226134 192226428 -7403722 - AluSx SINE Alu -15 297 1 2281 107 0 3 chr5 192226886 192227194 -7402956 + AluSq SINE Alu 1 307 -6 278 220 73 37 chr5 192227389 192227498 -7402652 + L1ME1 LINE L1 2989 3101 -3045 558 263 146 24 chr5 192227522 192227735 -7402415 - MIR SINE MIR -22 240 2 5208 211 62 81 chr5 192227804 192228211 -7401939 + L1ME1 LINE L1 3196 3609 -2569 2375 97 0 0 chr5 192228211 192228509 -7401641 + AluSx SINE Alu 1 298 -14 5208 211 62 81 chr5 192228509 192229145 -7401005 + L1ME1 LINE L1 3609 4256 -1922 2210 112 7 10 chr5 192229145 192229449 -7400701 + AluSq SINE Alu 1 303 -10 5208 211 62 81 chr5 192229449 192229642 -7400508 + L1ME1 LINE L1 4256 4451 -1727 423 0 0 0 chr5 192229642 192229689 -7400461 + (CA)n Simple_repeat Simple_repeat 2 48 0 5208 211 62 81 chr5 192229689 192230298 -7399852 + L1ME1 LINE L1 4451 5025 -1153 2477 85 0 0 chr5 192230298 192230604 -7399546 - AluY SINE Alu -4 307 2 5208 211 62 81 chr5 192230604 192231032 -7399118 + L1ME1 LINE L1 5025 5460 -718 2980 157 52 83 chr5 192231047 192231760 -7398390 - LTR8 LTR ERV1 0 691 1 2162 108 0 3 chr5 192231795 192232104 -7398046 + AluSp SINE Alu 1 308 0 1131 219 68 49 chr5 192232104 192232479 -7397671 + L1ME1 LINE L1 5767 6161 -5 356 299 147 29 chr5 192232509 192232857 -7397293 + L1M4 LINE L1 3604 3992 -2154 2348 96 3 3 chr5 192232958 192233260 -7396890 + AluSq SINE Alu 1 302 -11 228 304 14 0 chr5 192233279 192233348 -7396802 + GA-rich Low_complexity Low_complexity 2 71 0 2114 107 10 0 chr5 192233532 192233821 -7396329 + AluSx SINE Alu 1 292 -20 3566 132 10 42 chr5 192233987 192234038 -7396112 - L1MB3 LINE L1 -1 6182 6131 2299 99 3 0 chr5 192234038 192234332 -7395818 - AluSx SINE Alu -17 295 1 3566 132 10 42 chr5 192234332 192234901 -7395249 - L1MB3 LINE L1 -52 6131 5582 2153 121 0 13 chr5 192235006 192235313 -7394837 - AluSq SINE Alu -10 303 1 768 202 175 0 chr5 192235789 192235972 -7394178 + MER58C DNA MER1_type 1 215 0 438 187 172 113 chr5 192236443 192236507 -7393643 + MER58C DNA MER1_type 1 60 -2360 2393 63 0 23 chr5 192236507 192236806 -7393344 - AluY SINE Alu -18 293 2 438 187 172 113 chr5 192236806 192236944 -7393206 + MER58C DNA MER1_type 60 215 0 1799 142 3 52 chr5 192237996 192238320 -7391830 + AluJo SINE Alu 5 312 0 471 201 135 57 chr5 192238717 192238946 -7391204 - L1ME4a LINE L1 -20 6101 5855 1727 179 80 16 chr5 192239387 192239751 -7390399 + LTR65 LTR ERV1 1 387 -282 285 311 49 16 chr5 192239986 192240108 -7390042 + MER5B DNA MER1_type 53 178 0 304 238 52 117 chr5 192240685 192240883 -7389267 - L2 LINE L2 -9 3304 3122 194 0 39 0 chr5 192240883 192240909 -7389241 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 304 238 52 117 chr5 192240909 192240941 -7389209 - L2 LINE L2 -191 3122 3089 448 205 0 0 chr5 192240946 192241029 -7389121 - AluJb SINE Alu -92 220 138 1987 243 122 34 chr5 192241030 192241181 -7388969 - L2 LINE L2 -255 3058 2922 2470 61 14 0 chr5 192241181 192241478 -7388672 + AluSp SINE Alu 1 301 -12 1987 243 122 34 chr5 192241478 192242278 -7387872 - L2 LINE L2 -391 2922 2018 315 269 40 13 chr5 192242473 192242592 -7387558 - MER5A DNA MER1_type -3 175 53 1870 144 3 50 chr5 192242977 192243297 -7386853 - AluJb SINE Alu -7 305 1 294 257 119 0 chr5 192243336 192243445 -7386705 - MIR3 SINE MIR -19 189 68 273 211 35 0 chr5 192244042 192244099 -7386051 + MLT1D LTR MaLR 3 61 -444 990 143 97 25 chr5 192244155 192244541 -7385609 + MLT1D LTR MaLR 56 505 0 697 183 8 8 chr5 192244919 192245039 -7385111 + FLAM_A SINE Alu 2 121 -12 342 288 83 30 chr5 192246960 192247092 -7383058 + MIR SINE MIR 48 186 -76 189 258 210 24 chr5 192247626 192247750 -7382400 - MIR SINE MIR -36 226 80 2237 88 26 13 chr5 192248163 192248468 -7381682 + AluSg SINE Alu 2 310 0 1270 134 10 74 chr5 192248909 192249110 -7381040 - AluJo SINE Alu -20 292 115 2195 175 59 2 chr5 192249110 192249515 -7380635 + MSTA LTR MaLR 1 428 0 1270 134 10 74 chr5 192249515 192249611 -7380539 - AluJo SINE Alu -197 115 14 5796 121 19 9 chr5 192249826 192250722 -7379428 - L1PA15 LINE L1 -5 6160 5256 2465 70 0 3 chr5 192251405 192251703 -7378447 + AluSp SINE Alu 1 297 -16 362 253 0 0 chr5 192252762 192252849 -7377301 + MIR SINE MIR 164 250 -12 411 179 257 14 chr5 192253313 192253453 -7376697 + MER5A DNA MER1_type 10 183 -6 326 173 53 40 chr5 192253619 192253694 -7376456 + L2 LINE L2 3199 3274 -39 228 282 202 8 chr5 192253979 192254103 -7376047 - MIR SINE MIR -58 204 57 2466 97 0 0 chr5 192254107 192254418 -7375732 - AluY SINE Alu 0 311 1 816 203 68 0 chr5 192254782 192254959 -7375191 + MER5A DNA MER1_type 1 189 0 486 314 94 14 chr5 192254959 192255182 -7374968 + MIR SINE MIR 17 257 -5 475 289 90 19 chr5 192255211 192255422 -7374728 + L1ME4a LINE L1 5473 5698 -2110 2238 93 7 0 chr5 192255577 192255868 -7374282 + AluY SINE Alu 3 295 -16 513 216 160 5 chr5 192256084 192256278 -7373872 + L1ME4a LINE L1 5894 6117 -4 468 272 52 0 chr5 192257297 192257433 -7372717 + MIR SINE MIR 54 196 -66 2787 50 3 0 chr5 192257494 192257835 -7372315 - L1PA6 LINE L1 -1 6153 5812 24 0 0 0 chr5 192258115 192258139 -7372011 + AT_rich Low_complexity Low_complexity 1 24 0 426 311 36 6 chr5 192258760 192258927 -7371223 + MER5B DNA MER1_type 7 178 0 524 240 65 0 chr5 192259132 192259286 -7370864 - MIR SINE MIR -70 192 29 1574 153 54 34 chr5 192259707 192260001 -7370149 + AluJo SINE Alu 1 300 -12 514 265 65 62 chr5 192260191 192260497 -7369653 - L1MC4a LINE L1 -1902 5906 5600 2310 109 0 0 chr5 192260500 192260803 -7369347 - AluY SINE Alu -8 303 1 492 301 29 17 chr5 192260857 192261030 -7369120 - MIR SINE MIR -17 245 71 401 296 40 8 chr5 192261473 192261598 -7368552 + L2 LINE L2 2917 3045 -227 977 164 0 0 chr5 192261813 192261965 -7368185 + AluSg/x SINE Alu 153 304 -8 223 224 0 0 chr5 192262157 192262206 -7367944 + L2 LINE L2 3224 3272 0 515 244 128 55 chr5 192262656 192262930 -7367220 - MLT1H LTR MaLR -8 541 248 1996 146 3 0 chr5 192263220 192263514 -7366636 + AluSx SINE Alu 1 295 -17 464 280 61 56 chr5 192263848 192264062 -7366088 + LTR16B LTR ERVL 10 224 -240 460 320 32 0 chr5 192264162 192264318 -7365832 - MIR SINE MIR -8 254 94 506 230 65 38 chr5 192265070 192265280 -7364870 + MIR SINE MIR 45 261 -1 388 273 182 13 chr5 192265314 192265468 -7364682 - LTR16C LTR ERVL -42 449 270 426 236 155 6 chr5 192265871 192266045 -7364105 - MIR SINE MIR -14 248 49 2299 103 3 0 chr5 192266190 192266492 -7363658 + AluSx SINE Alu 1 303 -9 3817 154 55 22 chr5 192266574 192267268 -7362882 + LTR62 LTR ERVK 1 717 -2 310 194 45 0 chr5 192267332 192267399 -7362751 - MER94 DNA DNA -64 70 1 223 270 163 38 chr5 192267443 192267606 -7362544 - MIR SINE MIR -66 142 16 216 219 31 0 chr5 192267611 192267675 -7362475 + (TTCA)n Simple_repeat Simple_repeat 3 68 0 604 121 0 0 chr5 192267763 192267854 -7362296 + AluJ/FRAM SINE Alu 222 312 0 683 223 120 73 chr5 192267864 192268315 -7361835 + LTR48 LTR ERV1 217 583 -2 3847 148 54 36 chr5 192268342 192268489 -7361661 - MER50 LTR ERV1 -23 711 568 2375 98 10 0 chr5 192268489 192268795 -7361355 + AluSg SINE Alu 1 309 -1 3847 148 54 36 chr5 192268795 192269162 -7360988 - MER50 LTR ERV1 -166 568 178 2428 65 0 13 chr5 192269162 192269470 -7360680 - AluY SINE Alu -7 304 1 3847 148 54 36 chr5 192269470 192269652 -7360498 - MER50 LTR ERV1 -556 178 1 376 283 120 27 chr5 192269809 192269993 -7360157 + MIR SINE MIR 48 248 -14 2265 80 4 0 chr5 192270512 192270788 -7359362 - AluY SINE Alu -34 277 1 2041 126 0 7 chr5 192271013 192271322 -7358828 + AluSq SINE Alu 1 307 0 2172 117 10 3 chr5 192271566 192271866 -7358284 - AluSq SINE Alu -11 302 1 239 308 21 56 chr5 192272265 192272408 -7357742 + L1ME4a LINE L1 5682 5819 -1989 2199 116 3 0 chr5 192272419 192272712 -7357438 - AluSg SINE Alu -16 294 1 1316 218 156 17 chr5 192272712 192273116 -7357034 - MLT1C LTR MaLR -2 465 6 339 319 110 11 chr5 192273130 192273393 -7356757 + L1ME4a LINE L1 5830 6118 -3 1960 161 6 6 chr5 192273439 192273750 -7356400 + AluJo SINE Alu 1 311 -1 2052 125 16 29 chr5 192273980 192274291 -7355859 - AluJb SINE Alu -5 307 1 2316 100 3 0 chr5 192274402 192274692 -7355458 - AluSc SINE Alu -18 291 1 469 233 0 0 chr5 192275057 192275160 -7354990 + L1MA7 LINE L1 6164 6266 -25 374 256 147 6 chr5 192275580 192275736 -7354414 - MIR SINE MIR -12 250 73 270 0 0 0 chr5 192277599 192277629 -7352521 + (TC)n Simple_repeat Simple_repeat 1 30 0 306 332 0 27 chr5 192278054 192278241 -7351909 + L1MC5 LINE L1 7730 7911 -50 2213 92 20 7 chr5 192278783 192279087 -7351063 + AluSx SINE Alu 2 309 -3 616 265 195 23 chr5 192279412 192279996 -7350154 - L2 LINE L2 -75 3238 2566 1622 169 36 7 chr5 192280790 192281069 -7349081 - AluJb SINE Alu -25 287 1 386 188 0 83 chr5 192281351 192281447 -7348703 - MIR SINE MIR -112 150 63 3584 133 4 4 chr5 192281447 192281974 -7348176 - MER1A DNA MER1_type 0 527 1 247 353 49 57 chr5 192284136 192284380 -7345770 - L2 LINE L2 -1 3271 3030 2431 226 133 19 chr5 192284496 192285563 -7344587 + L1ME1 LINE L1 4969 6306 -28 2396 109 0 6 chr5 192285620 192285931 -7344219 - AluSc SINE Alu 0 309 1 288 154 0 0 chr5 192285958 192286010 -7344140 + (TA)n Simple_repeat Simple_repeat 2 53 0 230 298 42 74 chr5 192287132 192287347 -7342803 - MIR SINE MIR -10 252 45 21 36 0 0 chr5 192287755 192287783 -7342367 + AT_rich Low_complexity Low_complexity 1 28 0 181 363 75 7 chr5 192288224 192288370 -7341780 - MIR SINE MIR -75 187 32 838 129 0 0 chr5 192289770 192289886 -7340264 + AluSg/x SINE Alu 183 298 -14 425 239 47 5 chr5 192290059 192290211 -7339939 - L1ME3A LINE L1 -310 5860 5753 919 290 99 19 chr5 192290214 192290863 -7339287 + L1M4 LINE L1 2934 3634 -2512 215 233 0 0 chr5 192291127 192291170 -7338980 + (CAT)n Simple_repeat Simple_repeat 3 45 0 1743 168 7 23 chr5 192291342 192291645 -7338505 - AluJo SINE Alu -14 298 1 310 239 35 18 chr5 192291805 192291918 -7338232 + L1ME4a LINE L1 5987 6101 -20 377 210 0 0 chr5 192293584 192293646 -7336504 - MER2 DNA MER2_type 0 345 284 423 18 18 0 chr5 192293646 192293703 -7336447 - AluSc SINE Alu -7 303 246 2617 34 0 0 chr5 192294250 192294544 -7335606 - AluY SINE Alu -17 294 1 392 283 120 33 chr5 192294955 192295231 -7334919 - L2 LINE L2 -1 3312 3013 282 213 62 12 chr5 192295256 192295336 -7334814 + MIR SINE MIR 77 160 -102 368 286 0 88 chr5 192296477 192296648 -7333502 - L2 LINE L2 -588 2726 2571 301 241 69 86 chr5 192296672 192296904 -7333246 + L1M4 LINE L1 4491 4718 -1428 1599 173 40 4 chr5 192297405 192297677 -7332473 + AluJb SINE Alu 1 282 -30 1433 238 72 61 chr5 192297930 192298456 -7331694 - MLT1H LTR MaLR 0 549 18 237 196 152 80 chr5 192298559 192298671 -7331479 + MLT1K LTR MaLR 170 289 -299 286 221 7 125 chr5 192298762 192298898 -7331252 + MLT1K LTR MaLR 396 515 -73 2106 101 0 0 chr5 192299545 192299812 -7330338 - AluSc SINE Alu -42 267 1 325 229 168 8 chr5 192299818 192299949 -7330201 - L1ME4a LINE L1 -2 6119 5968 393 322 44 22 chr5 192300030 192300257 -7329893 + MIR SINE MIR 7 238 -24 420 264 9 119 chr5 192300573 192300742 -7329408 - L2 LINE L2 -5 3308 3169 2302 105 3 0 chr5 192300742 192301036 -7329114 + AluSp SINE Alu 1 295 -18 420 264 9 119 chr5 192301036 192301093 -7329057 - L2 LINE L2 -144 3169 3107 229 203 29 14 chr5 192301488 192301557 -7328593 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 2113 148 36 0 chr5 192301561 192301891 -7328259 - MLT2C1 LTR ERVL -55 342 1 528 241 179 54 chr5 192301950 192302333 -7327817 + L2 LINE L2 2692 3161 -152 1878 170 10 6 chr5 192302333 192302644 -7327506 + AluJb SINE Alu 1 312 0 528 241 179 54 chr5 192302644 192302770 -7327380 + L2 LINE L2 3161 3270 -43 238 191 0 21 chr5 192302908 192302955 -7327195 - LTR67 LTR ERVL -370 187 142 206 200 20 20 chr5 192303155 192303205 -7326945 + L2 LINE L2 3024 3073 -240 404 156 0 0 chr5 192303205 192303269 -7326881 + MADE1 DNA Mariner 12 75 -5 792 207 101 34 chr5 192303321 192303558 -7326592 - L1ME4a LINE L1 -235 5929 5677 1105 80 0 7 chr5 192303569 192303720 -7326430 - L1PA6 LINE L1 -6 6148 5999 661 276 180 12 chr5 192304093 192304416 -7325734 - L2 LINE L2 0 3313 2937 351 284 9 26 chr5 192304658 192304774 -7325376 - MER91A DNA MER1_type -81 115 2 451 298 85 31 chr5 192305546 192305854 -7324296 - L1ME4a LINE L1 -526 5595 5314 1198 201 84 0 chr5 192306743 192307016 -7323134 - MER63C DNA MER1_type -562 368 73 776 61 0 0 chr5 192307018 192307117 -7323033 + L1PA10 LINE L1 6068 6166 -2 211 169 0 34 chr5 192307135 192307194 -7322956 + (TA)n Simple_repeat Simple_repeat 1 57 0 237 276 26 0 chr5 192307407 192307483 -7322667 + MLT1L LTR MaLR 537 614 -1 616 233 242 5 chr5 192307506 192307721 -7322429 + LTR50 LTR ERVL 4 269 -526 459 235 224 21 chr5 192307765 192308070 -7322080 + LTR50 LTR ERVL 387 793 -2 374 231 11 0 chr5 192308669 192308760 -7321390 - MIR SINE MIR -108 154 63 1339 225 53 43 chr5 192308939 192309358 -7320792 - L1ME1 LINE L1 -5 6161 5740 1778 165 0 58 chr5 192309407 192309734 -7320416 + AluJo SINE Alu 2 309 -3 347 316 26 0 chr5 192310661 192310775 -7319375 - LTR67 LTR ERVL -8 549 433 519 341 118 28 chr5 192311276 192311666 -7318484 + LTR16A LTR ERVL 18 442 -8 618 298 97 32 chr5 192311753 192311840 -7318310 + L2 LINE L2 2458 2538 -734 2212 119 3 3 chr5 192311840 192312150 -7318000 + AluSx SINE Alu 1 310 -2 618 298 97 32 chr5 192312150 192312227 -7317923 + L2 LINE L2 2538 2609 -663 2161 175 16 75 chr5 192312227 192312525 -7317625 - MLT1C LTR MaLR 0 467 208 2181 127 0 0 chr5 192312525 192312817 -7317333 - AluSc SINE Alu -17 292 1 2161 175 16 75 chr5 192312817 192313014 -7317136 - MLT1C LTR MaLR -259 208 1 618 298 97 32 chr5 192313014 192313429 -7316721 + L2 LINE L2 2609 3067 -205 661 301 100 17 chr5 192313436 192313510 -7316640 - MLT1I LTR MaLR -3 406 340 1942 123 51 0 chr5 192313510 192313802 -7316348 - AluSx SINE Alu -5 307 1 661 301 100 17 chr5 192313802 192314016 -7316134 - MLT1I LTR MaLR -69 340 94 345 341 8 8 chr5 192314365 192314491 -7315659 + MIR SINE MIR 27 152 -110 1801 51 0 21 chr5 192314655 192314891 -7315259 - L1PA8 LINE L1 -2 6170 5940 203 164 15 60 chr5 192314958 192315025 -7315125 + (TTTAA)n Simple_repeat Simple_repeat 5 68 0 25 31 0 0 chr5 192315156 192315188 -7314962 + AT_rich Low_complexity Low_complexity 1 32 0 270 313 16 31 chr5 192315305 192315433 -7314717 + MIR SINE MIR 21 146 -62 4753 169 52 43 chr5 192316007 192316163 -7313987 - L1MB3 LINE L1 0 6183 6030 2298 174 28 0 chr5 192316163 192316555 -7313595 - MER57A LTR ERV1 0 403 1 4753 169 52 43 chr5 192316555 192316872 -7313278 - L1MB3 LINE L1 -153 6030 5717 1591 187 20 64 chr5 192316872 192317262 -7312888 + MER93b LTR ERV1 1 373 0 4753 169 52 43 chr5 192317262 192317774 -7312376 - L1MB3 LINE L1 -466 5717 5190 2138 61 72 17 chr5 192317774 192318067 -7312083 - AluY SINE Alu -2 309 1 4753 169 52 43 chr5 192318067 192318373 -7311777 - L1MB3 LINE L1 -993 5190 4888 201 39 0 0 chr5 192318871 192318897 -7311253 + (T)n Simple_repeat Simple_repeat 1 26 0 1083 114 6 6 chr5 192318899 192319065 -7311085 - L1PB2 LINE L1 -2 6149 5984 965 67 58 0 chr5 192319660 192319780 -7310370 - AluY SINE Alu -184 127 1 234 203 81 27 chr5 192319780 192319854 -7310296 - L1 LINE L1 -935 5211 5134 4184 87 7 0 chr5 192320154 192320704 -7309446 + MER41A LTR ERV1 1 554 0 232 311 53 45 chr5 192320865 192320997 -7309153 + L2 LINE L2 2920 3052 -220 352 248 17 0 chr5 192321409 192321526 -7308624 + CT-rich Low_complexity Low_complexity 2 120 0 274 333 40 35 chr5 192321809 192321983 -7308167 - MLT1K LTR MaLR -399 189 15 313 278 9 26 chr5 192322108 192322223 -7307927 - MIR SINE MIR -114 148 36 556 256 38 0 chr5 192322719 192322852 -7307298 + L2 LINE L2 3173 3310 -3 4315 237 87 81 chr5 192323195 192323835 -7306315 + L1MEc LINE L1 36 670 -5726 465 228 10 0 chr5 192323835 192323936 -7306214 + U13 snRNA snRNA 1 102 -2 4315 237 87 81 chr5 192323936 192324577 -7305573 + L1MEc LINE L1 670 1305 -5091 2011 151 0 0 chr5 192324577 192324901 -7305249 + AluSx SINE Alu 1 324 0 4315 237 87 81 chr5 192324901 192325780 -7304370 + L1MEc LINE L1 1305 2212 -4184 1414 189 111 40 chr5 192326723 192327093 -7303057 - MSTD LTR MaLR 0 396 1 2132 115 0 3 chr5 192328206 192328501 -7301649 + AluSx SINE Alu 1 294 -18 2241 45 63 11 chr5 192328632 192328919 -7301231 - AluY SINE Alu -9 302 1 35 71 0 0 chr5 192333500 192333570 -7296580 + AT_rich Low_complexity Low_complexity 1 70 0 211 208 75 19 chr5 192336041 192336094 -7294056 + MIR SINE MIR 93 148 -60 240 234 133 23 chr5 192336348 192336476 -7293674 + MIR SINE MIR 76 217 -45 188 328 0 0 chr5 192337533 192337591 -7292559 + MIR3 SINE MIR 133 190 -18 1680 95 5 5 chr5 192337601 192337823 -7292327 + AluSg/x SINE Alu 91 312 0 296 354 105 27 chr5 192337920 192338461 -7291689 + L2 LINE L2 2687 3271 -1 292 133 60 0 chr5 192338641 192338724 -7291426 + (TA)n Simple_repeat Simple_repeat 2 89 0 561 338 17 30 chr5 192338863 192339100 -7291050 - MIR SINE MIR -14 248 15 252 278 31 31 chr5 192340199 192340296 -7289854 + L2 LINE L2 3176 3272 0 529 325 95 20 chr5 192341048 192341439 -7288711 + L1MC4a LINE L1 5512 5931 -1877 493 126 53 32 chr5 192341514 192341609 -7288541 + L1MC3 LINE L1 7018 7114 -671 22 0 0 0 chr5 192341758 192341780 -7288370 + AT_rich Low_complexity Low_complexity 1 22 0 230 319 0 0 chr5 192343484 192343556 -7286594 + GA-rich Low_complexity Low_complexity 4 75 0 1996 110 67 23 chr5 192343613 192343912 -7286238 + AluSx SINE Alu 1 312 0 6281 156 80 11 chr5 192343914 192345184 -7284966 - L1MC3 LINE L1 -6 7779 6423 23 0 0 29 chr5 192345184 192345203 -7284947 + AT_rich Low_complexity Low_complexity 1 20 -13 2044 111 7 21 chr5 192345203 192345492 -7284658 - AluY SINE Alu -26 285 1 23 0 0 29 chr5 192345492 192345506 -7284644 + AT_rich Low_complexity Low_complexity 20 33 0 262 136 17 0 chr5 192345510 192345569 -7284581 - L1PA16 LINE L1 -9 6157 6098 515 161 0 0 chr5 192345570 192345657 -7284493 - L1PA16 LINE L1 -105 6061 5975 2724 120 0 9 chr5 192345661 192346094 -7284056 + L1PA16 LINE L1 5529 5957 -209 5190 198 41 27 chr5 192346105 192347503 -7282647 - L1MC3 LINE L1 -743 5403 4991 1929 140 13 23 chr5 192347503 192347810 -7282340 - AluJo SINE Alu -8 304 1 5190 198 41 27 chr5 192347810 192348983 -7281167 - L1MC3 LINE L1 -1155 4991 3836 962 108 27 20 chr5 192348983 192349110 -7281040 + AluSg/x SINE Alu 162 292 -20 5152 145 45 3 chr5 192349110 192350196 -7279954 - L1PA16 LINE L1 -14 6152 5082 962 108 27 20 chr5 192350196 192350216 -7279934 + AluSg/x SINE Alu 292 310 -2 523 161 125 0 chr5 192350228 192350340 -7279810 + L1M4 LINE L1 4905 5030 -1116 * 3078 226 68 38 chr5 192350337 192351505 -7278645 - L1MC3 LINE L1 -2293 3853 2650 186 297 189 27 chr5 192351624 192351735 -7278415 - MIR SINE MIR -66 196 68 309 241 23 11 chr5 192352074 192352161 -7277989 - MIR SINE MIR -15 247 160 1895 138 65 34 chr5 192353081 192353435 -7276715 - MLT1A1 LTR MaLR 0 365 1 752 187 0 11 chr5 192353857 192354217 -7275933 + (TGGA)n Simple_repeat Simple_repeat 1 355 0 244 316 38 0 chr5 192354513 192354592 -7275558 + MIR SINE MIR 111 192 -70 675 308 67 0 chr5 192354629 192354853 -7275297 - MIR SINE MIR -20 242 4 237 360 56 0 chr5 192355547 192355672 -7274478 + MIR SINE MIR 67 198 -64 180 0 0 0 chr5 192356061 192356081 -7274069 + (TG)n Simple_repeat Simple_repeat 1 20 0 254 349 60 30 chr5 192356485 192356717 -7273433 + L2 LINE L2 2594 2832 -482 533 335 73 4 chr5 192356861 192357106 -7273044 + MIR SINE MIR 1 262 0 457 275 27 89 chr5 192357295 192357759 -7272391 - MLT1L LTR MaLR -9 606 147 967 107 15 0 chr5 192358027 192358158 -7271992 + AluSx SINE Alu 1 133 -180 210 143 0 0 chr5 192358159 192358208 -7271942 + (A)n Simple_repeat Simple_repeat 1 49 0 1207 114 12 0 chr5 192358210 192358376 -7271774 + AluSx SINE Alu 131 298 -14 510 252 58 91 chr5 192358400 192358642 -7271508 - MIR SINE MIR -22 240 7 249 197 105 13 chr5 192359384 192359460 -7270690 - MLT1I LTR MaLR -284 125 43 586 321 99 31 chr5 192360149 192360824 -7269326 + HAL1b LINE L1 123 843 -505 232 191 0 0 chr5 192361286 192361333 -7268817 - MLT1I LTR MaLR -283 126 80 23 0 0 0 chr5 192361406 192361429 -7268721 + AT_rich Low_complexity Low_complexity 1 23 0 1837 192 28 35 chr5 192361499 192361962 -7268188 + MLT1D LTR MaLR 46 505 0 4076 230 165 22 chr5 192362762 192364393 -7265757 + L1ME1 LINE L1 3304 5167 -979 * 6541 47 1 0 chr5 192364389 192365227 -7264923 - L1PA6 LINE L1 -8 6146 5308 3192 216 14 27 chr5 192365227 192366132 -7264018 + L1ME1 LINE L1 5154 6049 -117 2553 182 67 11 chr5 192366212 192366779 -7263371 + L1MC4 LINE L1 7326 7924 -118 323 299 73 43 chr5 192366872 192367036 -7263114 + L1M4 LINE L1 3572 3740 -2406 1980 113 7 31 chr5 192367038 192367330 -7262820 + AluSx SINE Alu 17 301 -11 5370 104 46 17 chr5 192367335 192367545 -7262605 + L1PA13 LINE L1 5168 5370 -793 1637 153 8 8 chr5 192367545 192367806 -7262344 + AluSx SINE Alu 47 307 -5 5370 104 46 17 chr5 192367806 192368566 -7261584 + L1PA13 LINE L1 5370 6158 -5 1227 243 39 7 chr5 192368566 192368973 -7261177 - L1M4 LINE L1 -3130 3016 2597 1814 168 242 2 chr5 192368976 192369393 -7260757 + MLT2B1 LTR ERVL 4 520 0 2076 128 3 14 chr5 192369504 192369794 -7260356 - AluSx SINE Alu -25 287 1 2382 150 21 23 chr5 192370116 192370549 -7259601 - MSTB1 LTR MaLR 0 432 1 905 219 16 0 chr5 192370585 192370768 -7259382 - MER5A DNA MER1_type -3 186 1 40905 33 22 2 chr5 192370795 192376823 -7253327 - L1PA2 LINE L1 -1 6154 1 326 269 106 26 chr5 192377015 192377242 -7252908 + MLT1L LTR MaLR 347 591 -24 456 205 76 66 chr5 192378004 192378241 -7251909 + MER106B DNA MER1_type 2 1059 0 287 262 24 0 chr5 192378394 192378478 -7251672 + MER58B DNA MER1_type 256 341 0 865 160 0 15 chr5 192378519 192378650 -7251500 + FLAM_C SINE Alu 1 129 -4 4549 58 0 0 chr5 192378731 192379298 -7250852 + L1PA5 LINE L1 5588 6154 0 369 301 26 18 chr5 192379856 192379969 -7250181 - MIR3 SINE MIR -85 123 10 562 297 223 11 chr5 192380450 192380908 -7249242 + MLT1K LTR MaLR 3 557 -31 21 0 0 0 chr5 192381096 192381117 -7249033 + AT_rich Low_complexity Low_complexity 1 21 0 226 229 82 16 chr5 192381710 192381771 -7248379 + L2 LINE L2 3248 3312 -1 209 267 93 0 chr5 192382045 192382120 -7248030 - MIR SINE MIR -64 198 117 2098 117 0 4 chr5 192382170 192382486 -7247664 + AluSc SINE Alu 1 315 0 2319 92 10 0 chr5 192382642 192382934 -7247216 - AluSc SINE Alu -14 295 1 1849 178 92 7 chr5 192382934 192383356 -7246794 + MLT2C2 LTR ERVL 1 458 -6 345 24 0 0 chr5 192383424 192383466 -7246684 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 824 165 0 0 chr5 192383467 192383582 -7246568 - FLAM_C SINE Alu -22 121 7 350 286 87 16 chr5 192383842 192383968 -7246182 - L2 LINE L2 -16 3256 3122 3660 49 0 0 chr5 192384190 192384636 -7245514 + L1PA4 LINE L1 5697 6142 -13 512 260 107 6 chr5 192385717 192385894 -7244256 + MIR SINE MIR 53 247 -15 21 0 0 0 chr5 192386084 192386105 -7244045 + AT_rich Low_complexity Low_complexity 1 21 0 398 292 20 10 chr5 192386178 192386380 -7243770 - L1ME4a LINE L1 -206 5984 5781 460 240 8 16 chr5 192386384 192386505 -7243645 - LTR67 LTR ERVL -4 553 434 314 295 41 41 chr5 192386834 192386956 -7243194 - L1ME4a LINE L1 -424 5766 5645 3367 182 59 7 chr5 192387757 192388482 -7241668 - L1MD2 LINE L1 -217 6536 5774 1319 214 19 58 chr5 192388492 192388907 -7241243 - LTR55 LTR ERV -7 541 143 902 165 0 11 chr5 192388916 192389092 -7241058 + CT-rich Low_complexity Low_complexity 3 176 0 806 151 0 0 chr5 192389099 192389225 -7240925 - LTR55 LTR ERV -422 126 1 677 199 40 0 chr5 192389231 192389407 -7240743 - L1MD2 LINE L1 -776 5764 5582 3183 236 40 31 chr5 192389418 192390338 -7239812 - L1MD2 LINE L1 -4992 1548 621 1723 241 29 39 chr5 192390381 192390867 -7239283 - L1MD2 LINE L1 -6046 494 14 323 237 134 52 chr5 192390873 192391067 -7239083 - L1ME4a LINE L1 -2329 5548 5339 1662 237 85 46 chr5 192393260 192393347 -7236803 - L1ME4a LINE L1 -2532 3683 3601 2491 60 3 0 chr5 192393347 192393648 -7236502 - AluY SINE Alu -9 302 1 1662 237 85 46 chr5 192393648 192394477 -7235673 - L1ME4a LINE L1 -2614 3601 2731 524 346 78 30 chr5 192394509 192394954 -7235196 - L1MEc LINE L1 -5837 559 100 259 289 58 33 chr5 192394991 192395112 -7235038 - L2 LINE L2 -280 3033 2910 298 276 119 0 chr5 192395113 192395247 -7234903 - MIR SINE MIR -101 161 12 45 19 0 0 chr5 192396514 192396566 -7233584 + AT_rich Low_complexity Low_complexity 1 52 0 2174 90 65 0 chr5 192396696 192396974 -7233176 - AluSx SINE Alu -16 296 1 307 308 33 0 chr5 192397612 192397732 -7232418 + L1ME4a LINE L1 5794 5917 -204 192 275 0 0 chr5 192398431 192398471 -7231679 + L2 LINE L2 3210 3249 -23 551 219 95 33 chr5 192398543 192398753 -7231397 + L2 LINE L2 2336 2558 -756 2240 164 5 35 chr5 192398806 192399097 -7231053 - MLT1B LTR MaLR 0 390 113 3152 112 0 2 chr5 192399097 192399542 -7230608 + L1PB3 LINE L1 5711 6154 0 2240 164 5 35 chr5 192399542 192399652 -7230498 - MLT1B LTR MaLR -277 113 1 447 332 77 41 chr5 192399652 192400216 -7229934 + L2 LINE L2 2632 3207 -106 262 289 35 35 chr5 192400395 192400509 -7229641 + MIR SINE MIR 2 115 -147 5821 123 3 19 chr5 192400539 192401668 -7228482 + L1PA14 LINE L1 4914 6027 -134 2463 40 3 14 chr5 192401668 192401990 -7228160 + AluY SINE Alu 1 311 0 5821 123 3 19 chr5 192401990 192402121 -7228029 + L1PA14 LINE L1 6027 6158 -3 389 202 97 9 chr5 192402204 192402318 -7227832 + L1MC4 LINE L1 7918 8041 -1 2173 98 3 3 chr5 192402855 192403150 -7227000 - AluSc SINE Alu -14 295 1 5729 172 19 19 chr5 192403290 192403384 -7226766 - L1MA10 LINE L1 -2 6332 6239 2320 181 34 7 chr5 192403384 192403799 -7226351 + MSTB LTR MaLR 1 426 0 5729 172 19 19 chr5 192403799 192404826 -7225324 - L1MA10 LINE L1 -95 6239 5217 232 306 165 8 chr5 192405311 192405432 -7224718 - L2 LINE L2 -11 3261 3122 2319 109 0 6 chr5 192405574 192405886 -7224264 + AluSx SINE Alu 1 310 -2 909 37 0 0 chr5 192405977 192406086 -7224064 - L1PA3 LINE L1 0 6155 6047 3193 100 38 4 chr5 192407150 192407600 -7222550 - Charlie3 DNA MER1_type -4 2706 2242 * 3372 134 16 12 chr5 192407594 192408092 -7222058 - Charlie3 DNA MER1_type -2210 500 1 1153 267 45 21 chr5 192408889 192409267 -7220883 + L1MD1 LINE L1 5622 6008 -234 1040 274 122 9 chr5 192409278 192409599 -7220551 - LTR18A LTR ERVL 0 357 1 2634 165 2 0 chr5 192409600 192410005 -7220145 - HERVL18 LTR ERVL 0 6047 5642 1516 167 4 0 chr5 192410005 192410251 -7219899 - HERVL18 LTR ERVL -5800 247 1 842 268 141 7 chr5 192410257 192410526 -7219624 - LTR18A LTR ERVL 0 357 53 347 285 29 36 chr5 192410526 192410663 -7219487 + L1ME1 LINE L1 6014 6149 -17 610 213 71 30 chr5 192411076 192411245 -7218905 + MER5B DNA MER1_type 2 177 -1 1196 324 48 14 chr5 192413414 192413856 -7216294 - MER115 DNA AcHobo -228 465 9 1056 216 5 0 chr5 192413870 192414078 -7216072 - MER3 DNA MER1_type 0 209 1 328 313 0 10 chr5 192414080 192414176 -7215974 - MIR SINE MIR -84 124 30 276 252 122 32 chr5 192414195 192414318 -7215832 + MIR SINE MIR 86 219 -43 772 275 92 58 chr5 192415266 192415753 -7214397 - L2 LINE L2 0 3313 2810 1060 192 34 10 chr5 192415756 192415964 -7214186 + MER58A DNA MER1_type 1 213 -11 1806 244 186 32 chr5 192416369 192417303 -7212847 - HAL1 LINE L1 -463 2044 967 2377 96 0 3 chr5 192417662 192417963 -7212187 + AluSq SINE Alu 1 300 -13 2318 112 0 3 chr5 192418364 192418668 -7211482 + AluSc SINE Alu 1 303 -6 27 0 0 0 chr5 192419635 192419662 -7210488 + AT_rich Low_complexity Low_complexity 1 27 0 1521 127 51 51 chr5 192420089 192420381 -7209769 - AluJo SINE Alu -2 310 19 487 300 61 13 chr5 192421110 192421340 -7208810 + MIR SINE MIR 6 246 -16 184 188 31 78 chr5 192422057 192422121 -7208029 + L2 LINE L2 3237 3297 -16 295 257 88 9 chr5 192424190 192424303 -7205847 + MIR SINE MIR 71 192 -70 295 255 71 10 chr5 192425418 192425516 -7204634 - MIR SINE MIR -78 184 81 222 246 0 33 chr5 192425565 192425626 -7204524 + GA-rich Low_complexity Low_complexity 6 64 0 1585 145 67 22 chr5 192426005 192426121 -7204029 + AluJb SINE Alu 1 110 -212 308 24 24 0 chr5 192426121 192426162 -7203988 + (CAAA)n Simple_repeat Simple_repeat 4 45 0 1585 145 67 22 chr5 192426162 192426355 -7203795 + AluJb SINE Alu 110 322 0 236 272 53 70 chr5 192426480 192426594 -7203556 - MLT1K LTR MaLR -209 379 268 38 22 0 0 chr5 192427141 192427186 -7202964 + AT_rich Low_complexity Low_complexity 1 45 0 345 253 63 14 chr5 192477797 192477909 -7152241 - MIR SINE MIR -63 145 35 267 217 0 0 chr5 192478050 192478110 -7152040 - L1M1 LINE L1 -4604 2961 2902 2239 123 3 0 chr5 192478128 192478436 -7151714 + AluSx SINE Alu 1 309 -3 858 235 143 11 chr5 192478438 192478583 -7151567 + LTR37A LTR ERV1 32 157 -269 372 22 0 0 chr5 192478583 192478628 -7151522 + (CA)n Simple_repeat Simple_repeat 2 46 0 858 235 143 11 chr5 192478628 192478831 -7151319 + LTR37A LTR ERV1 157 426 0 2340 102 0 3 chr5 192479187 192479491 -7150659 + AluSg SINE Alu 1 303 -7 702 221 98 0 chr5 192479493 192479656 -7150494 + AluJo/FRAM SINE Alu 130 308 -4 519 248 28 21 chr5 192479870 192480015 -7150135 + LTR54B LTR ERV1 1 146 -352 2219 103 20 0 chr5 192480271 192480571 -7149579 + AluSx SINE Alu 1 306 -6 756 265 72 57 chr5 192480589 192480853 -7149297 - MLT1J LTR MaLR -136 375 108 581 194 136 39 chr5 192480888 192481094 -7149056 + Charlie8 DNA MER1_type 32 257 -2160 408 20 0 0 chr5 192481185 192481234 -7148916 + (TTA)n Simple_repeat Simple_repeat 1 49 0 710 236 7 0 chr5 192481234 192481378 -7148772 - FRAM SINE Alu -32 144 1 479 264 0 0 chr5 192481796 192481925 -7148225 + L1ME LINE L1 5674 5802 -360 258 182 0 91 chr5 192482051 192482106 -7148044 - MER66B LTR ERV1 -141 345 296 2183 131 0 3 chr5 192482108 192482405 -7147745 - AluSx SINE Alu -16 296 1 3512 179 22 51 chr5 192482469 192483180 -7146970 + LTR8 LTR ERV1 1 691 0 2035 97 3 47 chr5 192483213 192483560 -7146590 + AluSc SINE Alu 1 309 0 322 160 10 107 chr5 192483560 192483697 -7146453 - MER4B-int LTR ERV1 -3774 2675 1095 612 146 0 0 chr5 192483706 192483802 -7146348 - AluJb SINE Alu -25 287 192 1677 199 7 10 chr5 192484126 192484432 -7145718 + AluJb SINE Alu 1 305 -7 422 221 28 0 chr5 192484667 192484791 -7145359 + L1MC4a LINE L1 5726 5858 -263 26 30 0 0 chr5 192484808 192484841 -7145309 + AT_rich Low_complexity Low_complexity 1 33 0 234 105 0 0 chr5 192484841 192484879 -7145271 + (TG)n Simple_repeat Simple_repeat 2 39 0 448 189 168 0 chr5 192484883 192484978 -7145172 + MIR SINE MIR 36 146 -116 2336 92 0 16 chr5 192484981 192485295 -7144855 + AluSq SINE Alu 1 309 -4 1189 246 186 22 chr5 192486035 192486616 -7143534 + L2 LINE L2 2635 3313 0 188 316 105 23 chr5 192486706 192486877 -7143273 - L2 LINE L2 -918 2396 2212 197 278 56 14 chr5 192487665 192487737 -7142413 - MIR3 SINE MIR -53 155 81 321 179 277 36 chr5 192487957 192488069 -7142081 - MER117 DNA MER1_type -6 191 53 611 268 94 35 chr5 192488325 192488612 -7141538 - MLT1K LTR MaLR -28 560 257 245 105 0 0 chr5 192488717 192488800 -7141350 + Alu SINE Alu 250 332 0 373 247 0 0 chr5 192488800 192488885 -7141265 + MER87 LTR ERV1 405 489 -52 2146 136 3 0 chr5 192488946 192489256 -7140894 - AluSx SINE Alu -1 311 1 1704 230 27 82 chr5 192489294 192489854 -7140296 + MER57-int LTR ERV1 6617 7145 -392 1148 147 42 15 chr5 192489864 192490240 -7139910 + LTR54 LTR ERV1 23 467 -43 689 247 19 6 chr5 192491125 192491287 -7138863 - MIR SINE MIR -20 242 79 613 294 133 14 chr5 192492263 192492542 -7137608 - L2 LINE L2 -195 3118 2807 2395 105 0 0 chr5 192492738 192493042 -7137108 - AluSx SINE Alu -6 306 3 2283 237 14 2 chr5 192493196 192493798 -7136352 + L1 LINE L1 3954 4566 -1580 2003 154 27 104 chr5 192494408 192494966 -7135184 + LTR45 LTR ERV1 11 525 0 276 170 0 0 chr5 192495080 192495133 -7135017 + CT-rich Low_complexity Low_complexity 3 55 0 247 79 79 0 chr5 192495221 192495259 -7134891 + MIR SINE MIR 111 151 -111 317 293 24 30 chr5 192496112 192496276 -7133874 + GA-rich Low_complexity Low_complexity 1 163 0 216 0 0 0 chr5 192496298 192496322 -7133828 + (GA)n Simple_repeat Simple_repeat 1 24 0 302 245 22 44 chr5 192496651 192496795 -7133355 + MIR SINE MIR 34 152 -56 449 322 17 11 chr5 192497763 192497937 -7132213 + MIR SINE MIR 87 261 -1 233 348 13 19 chr5 192498251 192498409 -7131741 - L2 LINE L2 -377 2937 2781 367 267 105 63 chr5 192498470 192498755 -7131395 - L2 LINE L2 -669 2645 2349 824 238 22 4 chr5 192498797 192499028 -7131122 + L1MB5 LINE L1 5930 6164 -10 295 307 35 9 chr5 192499825 192499939 -7130211 - MLT1L LTR MaLR -6 609 493 241 220 17 0 chr5 192500137 192500196 -7129954 - MLT1J LTR MaLR -342 169 110 444 280 71 13 chr5 192500631 192500856 -7129294 - MLT2D LTR ERVL -132 282 45 1337 218 56 51 chr5 192501109 192501386 -7128764 + MLT1E LTR MaLR 74 389 -204 1772 215 25 25 chr5 192501386 192501782 -7128368 - MSTD LTR MaLR 0 396 1 1337 218 56 51 chr5 192501782 192501988 -7128162 + MLT1E LTR MaLR 389 592 -1 1268 147 78 37 chr5 192502382 192502600 -7127550 + AluJb SINE Alu 72 298 -14 235 274 44 62 chr5 192502663 192502776 -7127374 - L1ME3A LINE L1 -95 6075 5965 378 260 68 60 chr5 192502826 192503017 -7127133 - L1ME3A LINE L1 -201 5963 5768 960 237 4 39 chr5 192503017 192503249 -7126901 + MER58A DNA MER1_type 1 224 0 378 260 68 60 chr5 192503249 192503292 -7126858 - L1ME3A LINE L1 -396 5768 5727 2676 210 15 30 chr5 192503845 192504863 -7125287 + L1MB7 LINE L1 4884 5883 -301 2243 54 58 4 chr5 192504984 192505308 -7124842 + AluY SINE Alu 1 311 0 346 164 0 0 chr5 192505308 192505363 -7124787 + MSTA LTR MaLR 374 428 0 266 273 81 55 chr5 192505819 192506090 -7124060 - L1ME LINE L1 -303 5818 5541 1809 185 0 7 chr5 192506383 192506681 -7123469 - AluJb SINE Alu -14 298 3 232 265 0 0 chr5 192508151 192508200 -7121950 + (TG)n Simple_repeat Simple_repeat 1 49 0 409 284 8 8 chr5 192508240 192508367 -7121783 - MIR3 SINE MIR -10 198 72 273 370 10 0 chr5 192508424 192508524 -7121626 - MIR SINE MIR -11 251 151 182 265 118 39 chr5 192509437 192509539 -7120611 + L3 LINE CR1 1316 1425 -152 354 293 24 32 chr5 192509769 192509892 -7120258 - MIR SINE MIR -108 154 33 457 244 8 23 chr5 192510233 192510364 -7119786 + MER5B DNA MER1_type 50 178 0 182 250 0 0 chr5 192510866 192510906 -7119244 - MIR SINE MIR -5 257 218 2366 189 42 7 chr5 192511343 192511799 -7118351 + MLT1F LTR MaLR 41 512 -30 937 188 35 6 chr5 192511799 192511969 -7118181 - FRAM SINE Alu -10 166 1 217 217 0 50 chr5 192512208 192512268 -7117882 + CT-rich Low_complexity Low_complexity 4 60 0 2402 96 3 0 chr5 192512315 192512618 -7117532 - AluSq SINE Alu -9 304 1 240 302 26 52 chr5 192512624 192512740 -7117410 - MIR SINE MIR -13 249 137 195 336 74 27 chr5 192512750 192512899 -7117251 - MIR SINE MIR -94 168 13 231 183 81 65 chr5 192512906 192512983 -7117167 + MIR SINE MIR 105 183 -60 270 348 67 7 chr5 192513620 192513755 -7116395 + L3 LINE CR1 1430 1572 -5 278 282 10 19 chr5 192513825 192513928 -7116222 + L2 LINE L2 2683 2784 -530 302 254 90 8 chr5 192514046 192514168 -7115982 + L2 LINE L2 2915 3046 -226 202 286 232 9 chr5 192514220 192514332 -7115818 + L2 LINE L2 3165 3301 -12 2345 214 46 23 chr5 192514813 192515379 -7114771 + MLT1E LTR MaLR 1 579 -14 502 289 56 28 chr5 192521112 192521292 -7108858 - L2 LINE L2 0 3313 3129 1891 105 97 0 chr5 192521293 192521584 -7108566 + AluSx SINE Alu 1 316 0 550 262 93 23 chr5 192522097 192522269 -7107881 - MIR3 SINE MIR -21 187 4 438 284 73 34 chr5 192522551 192522755 -7107395 + MLT1K LTR MaLR 376 587 -1 1823 179 53 63 chr5 192522924 192523432 -7106718 + MLT1D LTR MaLR 1 503 -2 207 287 259 14 chr5 192524115 192524331 -7105819 - L2 LINE L2 -821 2493 2225 385 333 83 6 chr5 192525239 192525419 -7104731 + MIR SINE MIR 56 249 -13 278 67 22 0 chr5 192526214 192526259 -7103891 + (TCCCC)n Simple_repeat Simple_repeat 4 49 0 353 333 9 0 chr5 192526266 192526377 -7103773 + MLT1K LTR MaLR 308 419 -169 327 235 30 71 chr5 192527072 192527225 -7102925 + MIR3 SINE MIR 15 160 -67 22 0 0 0 chr5 192527594 192527616 -7102534 + AT_rich Low_complexity Low_complexity 1 22 0 260 316 143 12 chr5 192528249 192528417 -7101733 + MIR SINE MIR 25 214 -48 228 342 13 0 chr5 192528749 192528825 -7101325 + MIR SINE MIR 29 105 -103 300 235 10 49 chr5 192528951 192529053 -7101097 + CT-rich Low_complexity Low_complexity 1 98 0 621 193 17 0 chr5 192529166 192529285 -7100865 - L2 LINE L2 0 3313 3193 356 305 38 23 chr5 192529816 192529947 -7100203 + MIR SINE MIR 28 160 -102 391 221 0 0 chr5 192530943 192531020 -7099130 - L2 LINE L2 -6 3307 3231 189 243 29 14 chr5 192531512 192531582 -7098568 + L2 LINE L2 2928 2998 -274 * 633 249 139 0 chr5 192531565 192531738 -7098412 + MIR SINE MIR 44 240 -22 199 294 26 65 chr5 192531928 192532081 -7098069 + L2 LINE L2 3122 3268 -4 188 139 0 23 chr5 192532158 192532201 -7097949 + (TG)n Simple_repeat Simple_repeat 2 43 0 236 54 54 0 chr5 192532328 192532365 -7097785 + G-rich Low_complexity Low_complexity 2 40 0 204 311 14 14 chr5 192532972 192533046 -7097104 + C-rich Low_complexity Low_complexity 6 79 0 270 316 93 38 chr5 192533151 192533388 -7096762 + L2 LINE L2 3003 3252 -20 222 37 0 0 chr5 192533668 192533695 -7096455 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 583 259 11 23 chr5 192534475 192534649 -7095501 + L3 LINE CR1 1069 1240 -337 218 213 115 0 chr5 192534689 192534750 -7095400 + L2 LINE L2 3205 3272 0 * 347 280 63 48 chr5 192534745 192534934 -7095216 + L3 LINE CR1 1261 1452 -125 224 303 277 41 chr5 192535276 192535471 -7094679 - MIR SINE MIR -2 260 20 206 286 55 11 chr5 192536875 192536966 -7093184 + L2 LINE L2 2940 3034 -238 362 283 138 0 chr5 192536993 192537131 -7093019 - MIR SINE MIR -8 254 98 2247 102 0 7 chr5 192537131 192537424 -7092726 + AluSx SINE Alu 1 291 -21 336 349 8 0 chr5 192538157 192538289 -7091861 - Charlie8 DNA MER1_type -2182 235 103 2725 174 24 45 chr5 192538306 192538533 -7091617 - L1MB3 LINE L1 -2 6181 5951 2445 81 7 7 chr5 192538533 192538843 -7091307 - AluSg SINE Alu 0 310 1 2725 174 24 45 chr5 192538843 192539134 -7091016 - L1MB3 LINE L1 -232 5951 5675 2328 88 0 3 chr5 192539134 192539466 -7090684 - AluSx SINE Alu 0 331 1 2725 174 24 45 chr5 192539466 192539570 -7090580 - L1MB3 LINE L1 -508 5675 5570 582 225 47 0 chr5 192539593 192539762 -7090388 + MER104 DNA MER2_type 1 177 -3 706 243 175 114 chr5 192540875 192541394 -7088756 + MLT1K LTR MaLR 15 565 -23 2268 115 0 10 chr5 192541406 192541720 -7088430 + AluSx SINE Alu 1 311 -1 1482 282 31 7 chr5 192541850 192542275 -7087875 + LTR16A LTR ERVL 16 450 0 266 309 36 12 chr5 192542275 192542359 -7087791 + HERV16 LTR ERVL 1 86 -4910 994 241 95 41 chr5 192542387 192542756 -7087394 + HERV16 LTR ERVL 164 552 -4444 942 132 0 0 chr5 192542757 192542886 -7087264 + AluSg SINE Alu 1 129 -181 1609 103 0 56 chr5 192542886 192543118 -7087032 + AluSg/x SINE Alu 82 300 -12 2116 271 68 10 chr5 192543140 192543826 -7086324 + HERV16 LTR ERVL 547 1272 -3724 2035 145 36 3 chr5 192543959 192544296 -7085854 - MLT1A1 LTR MaLR -17 348 1 679 283 111 24 chr5 192544363 192544695 -7085455 + HERV16 LTR ERVL 1569 1929 -3067 2474 287 124 26 chr5 192544781 192545133 -7085017 + HERV16 LTR ERVL 2107 2423 -2892 1958 138 14 7 chr5 192545133 192545422 -7084728 + AluSx SINE Alu 1 291 -21 2474 287 124 26 chr5 192545422 192546281 -7083869 + HERV16 LTR ERVL 2423 3410 -1905 361 347 63 42 chr5 192546522 192546852 -7083298 + HERV16 LTR ERVL 4054 4601 -606 2410 258 73 17 chr5 192547161 192547756 -7082394 + L1ME3A LINE L1 5337 5988 -182 2497 74 3 16 chr5 192547756 192548068 -7082082 + AluSc SINE Alu 1 308 -1 2410 258 73 17 chr5 192548068 192548251 -7081899 + L1ME3A LINE L1 5988 6159 -11 240 264 14 28 chr5 192549161 192549233 -7080917 + L3 LINE CR1 1423 1493 -84 407 293 20 27 chr5 192549357 192549504 -7080646 - MIR SINE MIR -97 165 20 479 244 115 96 chr5 192550144 192550253 -7079897 + MLT1I LTR MaLR 72 177 -232 2362 96 0 0 chr5 192550253 192550544 -7079606 + AluSc SINE Alu 1 291 -18 479 244 115 96 chr5 192550544 192550746 -7079404 + MLT1I LTR MaLR 177 389 -20 288 266 62 128 chr5 192550787 192551061 -7079089 - L2 LINE L2 -27 3245 2990 245 304 120 38 chr5 192551068 192551252 -7078898 + Charlie8 DNA MER1_type 5 203 -2214 370 291 0 10 chr5 192551659 192551762 -7078388 + MLT1K LTR MaLR 2 103 -485 268 315 16 8 chr5 192551988 192552115 -7078035 + LTR67 LTR ERVL 429 556 -1 729 278 149 22 chr5 192552597 192553046 -7077104 + MER113 DNA MER1_type? 15 520 -1 210 234 47 0 chr5 192553281 192553345 -7076805 - MIR SINE MIR -1 261 195 378 218 157 41 chr5 192553349 192553496 -7076654 + MER113 DNA MER1_type? 1 164 -357 260 321 97 13 chr5 192553686 192553809 -7076341 - MIR SINE MIR -76 132 2 237 146 0 0 chr5 192555124 192555172 -7074978 + (CAAGT)n Simple_repeat Simple_repeat 1 48 0 291 203 152 0 chr5 192555576 192555655 -7074495 - MIR SINE MIR -2 260 170 225 355 27 18 chr5 192556139 192556249 -7073901 - L2 LINE L2 -7 3265 3155 653 257 14 0 chr5 192556358 192556506 -7073644 + MIR3 SINE MIR 22 171 -37 246 231 88 44 chr5 192557129 192557220 -7072930 + MIR3 SINE MIR 9 103 -105 272 143 0 20 chr5 192557227 192557276 -7072874 - L2 LINE L2 0 3272 3225 572 235 57 18 chr5 192557285 192557456 -7072694 + MIR SINE MIR 28 212 -50 330 180 0 0 chr5 192558113 192558174 -7071976 + MIR SINE MIR 108 168 -94 271 308 75 19 chr5 192558301 192558408 -7071742 + L2 LINE L2 3154 3266 -6 365 250 139 14 chr5 192558455 192558593 -7071557 - MIR3 SINE MIR -62 146 10 188 309 83 48 chr5 192558719 192558887 -7071263 - MIR SINE MIR -81 181 8 275 261 15 0 chr5 192558945 192559010 -7071140 + L2 LINE L2 3207 3272 0 323 256 0 13 chr5 192559046 192559124 -7071026 - L2 LINE L2 -40 3273 3197 324 263 21 42 chr5 192559358 192559453 -7070697 + L2 LINE L2 3179 3271 -1 203 333 15 0 chr5 192559643 192559709 -7070441 - L2 LINE L2 -49 3264 3198 2238 92 7 30 chr5 192559921 192560224 -7069926 + AluSp SINE Alu 1 296 -17 372 287 144 17 chr5 192560339 192560610 -7069540 - L2 LINE L2 -263 3050 2738 309 362 17 0 chr5 192561175 192561291 -7068859 + MIR SINE MIR 32 149 -59 212 305 183 19 chr5 192561367 192561562 -7068588 + MIR SINE MIR 25 259 -3 468 213 110 65 chr5 192561635 192561790 -7068360 - MIR SINE MIR -14 248 87 198 261 22 0 chr5 192561916 192561962 -7068188 - L2 LINE L2 -13 3259 3213 574 200 186 7 chr5 192561995 192562135 -7068015 - MER5A DNA MER1_type -21 168 4 207 292 28 14 chr5 192562185 192562257 -7067893 - MIR SINE MIR -110 152 80 783 153 68 6 chr5 192562571 192562734 -7067416 - MER96B DNA MER1_type? -239 178 6 670 321 186 4 chr5 192563054 192563497 -7066653 + L2 LINE L2 2793 3311 -2 271 294 54 22 chr5 192563484 192563576 -7066574 + MIR SINE MIR 94 188 -74 * 2225 115 10 13 chr5 192563586 192563899 -7066251 + AluSx SINE Alu 1 312 0 197 211 0 0 chr5 192563913 192563951 -7066199 - L2 LINE L2 -17 3255 3218 222 236 333 0 chr5 192563976 192564048 -7066102 - MIR SINE MIR -111 151 56 315 348 62 9 chr5 192564602 192564714 -7065436 - L2 LINE L2 -13 3259 3142 259 204 0 0 chr5 192564731 192564785 -7065365 + MIR SINE MIR 68 121 -87 190 271 21 0 chr5 192564813 192564861 -7065289 + L2 LINE L2 2724 2772 -542 873 264 17 26 chr5 192564988 192565219 -7064931 - MIR SINE MIR -22 240 12 622 318 113 27 chr5 192565296 192566031 -7064119 + L2 LINE L2 2637 3267 -5 699 137 0 0 chr5 192566475 192566577 -7063573 - AluSg/x SINE Alu -12 298 197 1362 157 4 78 chr5 192567143 192567398 -7062752 + AluJo SINE Alu 1 236 -76 333 0 0 0 chr5 192567401 192567438 -7062712 + (TA)n Simple_repeat Simple_repeat 2 38 0 285 297 127 0 chr5 192567585 192567703 -7062447 + MIR3 SINE MIR 37 169 -39 231 279 0 0 chr5 192568066 192568127 -7062023 + L1MC5 LINE L1 7723 7783 -178 479 148 93 37 chr5 192568177 192568285 -7061865 + L1MC5 LINE L1 7793 7906 -55 334 302 169 29 chr5 192568480 192568652 -7061498 + L2 LINE L2 3075 3270 -2 428 215 196 38 chr5 192568667 192568825 -7061325 - MIR SINE MIR -8 254 72 427 290 0 0 chr5 192568891 192568991 -7061159 + MIR SINE MIR 30 129 -79 376 325 88 44 chr5 192570809 192571154 -7058996 + L2 LINE L2 2909 3269 -3 2438 84 3 7 chr5 192571213 192571523 -7058627 - AluSc SINE Alu 0 309 1 710 316 53 42 chr5 192571580 192572011 -7058139 + L2 LINE L2 2826 3261 -52 381 329 26 7 chr5 192572281 192572433 -7057717 - MIR SINE MIR -36 226 72 519 314 124 0 chr5 192572653 192572879 -7057271 - MIR SINE MIR 0 262 9 235 268 73 37 chr5 192572878 192572960 -7057190 + MER5A DNA MER1_type 83 167 -22 * 241 261 87 0 chr5 192573377 192573446 -7056704 + L2 LINE L2 3189 3263 -9 262 273 227 0 chr5 192573924 192574034 -7056116 - MIR SINE MIR -3 259 125 1526 147 128 20 chr5 192574046 192574341 -7055809 + AluSg1 SINE Alu 1 322 0 1441 237 107 43 chr5 192574344 192574655 -7055495 - L1ME3 LINE L1 -252 5910 5620 2256 123 0 3 chr5 192574655 192574963 -7055187 - AluSx SINE Alu -5 307 1 1441 237 107 43 chr5 192574963 192575647 -7054503 - L1ME3 LINE L1 -542 5620 4845 2108 144 31 73 chr5 192575647 192576098 -7054052 - MSTB1 LTR MaLR 0 432 1 1441 237 107 43 chr5 192576098 192576115 -7054035 - L1ME3 LINE L1 -1317 4845 4831 492 332 95 43 chr5 192576134 192576164 -7053986 + L2 LINE L2 2713 2740 -573 2368 91 7 3 chr5 192576164 192576471 -7053679 - AluY SINE Alu -3 308 1 492 332 95 43 chr5 192576471 192576940 -7053210 + L2 LINE L2 2740 3253 -60 1607 185 90 48 chr5 192576973 192577352 -7052798 - MSTD LTR MaLR -1 395 1 183 170 106 0 chr5 192577354 192577401 -7052749 + L2 LINE L2 3219 3270 -2 337 241 109 29 chr5 192577641 192577778 -7052372 - MIR SINE MIR -39 223 76 502 271 131 13 chr5 192577866 192578095 -7052055 + MIR SINE MIR 7 262 0 242 211 0 35 chr5 192578374 192578431 -7051719 - MIR SINE MIR -77 131 77 258 340 31 0 chr5 192578886 192578983 -7051167 + MIR SINE MIR 109 208 -54 1545 209 34 3 chr5 192579265 192579562 -7050588 + AluJo SINE Alu 1 306 -6 764 298 117 37 chr5 192579677 192580171 -7049979 - L2 LINE L2 0 3313 2770 266 324 89 20 chr5 192580539 192580686 -7049464 + MIR SINE MIR 45 207 -55 4438 111 15 7 chr5 192580694 192581368 -7048782 + L1MC1 LINE L1 5651 6329 -4 340 306 12 19 chr5 192581811 192581971 -7048179 + MLT1K LTR MaLR 430 588 0 906 219 102 5 chr5 192582099 192582314 -7047836 + MER46A DNA MER2_type 1 236 0 2343 172 52 9 chr5 192582831 192583291 -7046859 + MLT2B1 LTR ERVL 1 480 -40 192 77 0 0 chr5 192583320 192583346 -7046804 + (TA)n Simple_repeat Simple_repeat 1 26 0 276 53 81 15 chr5 192583352 192583410 -7046740 + MLT2B1 LTR ERVL 397 552 -2 689 268 24 54 chr5 192583854 192584246 -7045904 - MLT1G1 LTR MaLR 0 595 182 687 176 28 7 chr5 192584254 192584396 -7045754 + L1MA8 LINE L1 6042 6186 -105 301 233 190 0 chr5 192584398 192584514 -7045636 - MLT1G1 LTR MaLR -443 147 10 280 226 95 66 chr5 192584542 192584679 -7045471 - MLT1G1-int LTR MaLR -21 1714 1574 491 146 0 0 chr5 192585173 192585255 -7044895 - L1MC4 LINE L1 -1 8041 7960 694 308 29 29 chr5 192585553 192585904 -7044246 + MLT1K LTR MaLR 225 575 -13 261 219 0 0 chr5 192586379 192586452 -7043698 + (ATG)n Simple_repeat Simple_repeat 2 74 0 837 280 86 91 chr5 192586514 192586856 -7043294 + MLT1K LTR MaLR 10 349 -239 2478 158 21 19 chr5 192586856 192587279 -7042871 - MSTB LTR MaLR 0 426 3 837 280 86 91 chr5 192587279 192587497 -7042653 + MLT1K LTR MaLR 349 567 -21 490 278 49 14 chr5 192587497 192587641 -7042509 - MIR SINE MIR -81 181 33 188 219 0 0 chr5 192587667 192587708 -7042442 + MIR3 SINE MIR 155 195 -13 21 57 0 0 chr5 192588228 192588263 -7041887 + AT_rich Low_complexity Low_complexity 1 35 0 571 331 22 25 chr5 192588307 192588567 -7041583 - MIR SINE MIR -2 260 4 1523 183 34 4 chr5 192588612 192588874 -7041276 + AluJo SINE Alu 26 295 -17 435 343 130 25 chr5 192588918 192589349 -7040801 + L2 LINE L2 2255 2730 -584 378 0 0 0 chr5 192590514 192590556 -7039594 + (TA)n Simple_repeat Simple_repeat 2 43 0 1323 195 56 0 chr5 192590571 192590822 -7039328 - AluJo SINE Alu -47 265 1 208 321 0 0 chr5 192590919 192591000 -7039150 + (CATA)n Simple_repeat Simple_repeat 3 83 0 366 346 0 9 chr5 192591155 192591262 -7038888 + MIR SINE MIR 20 125 -137 520 281 101 25 chr5 192591913 192592112 -7038038 - MIR SINE MIR -9 253 40 366 364 0 0 chr5 192592219 192592351 -7037799 + MIR SINE MIR 16 147 -61 2224 142 11 0 chr5 192592392 192592751 -7037399 - MER41E LTR ERV1 0 512 150 452 282 77 32 chr5 192592820 192593040 -7037110 - MIR SINE MIR -10 252 23 369 200 22 11 chr5 192593199 192593289 -7036861 - MIR SINE MIR -84 124 34 252 262 94 33 chr5 192593638 192593768 -7036382 + MIR SINE MIR 17 149 -60 359 213 180 53 chr5 192594408 192594558 -7035592 + MIR SINE MIR 17 185 -77 307 221 53 32 chr5 192594560 192594655 -7035495 + MER21B LTR ERV1 10 106 -757 * 2782 199 20 13 chr5 192594653 192595207 -7034943 + MER21B LTR ERV1 19 576 -287 1353 206 25 46 chr5 192595205 192595531 -7034619 + MER21B LTR ERV1 534 852 -11 * 186 143 0 0 chr5 192595641 192595676 -7034474 + (TCCA)n Simple_repeat Simple_repeat 4 38 0 396 283 43 19 chr5 192595951 192596182 -7033968 - LTR33 LTR ERVL -148 373 99 1083 198 33 5 chr5 192596799 192597011 -7033139 + MER20 DNA MER1_type 2 219 0 540 225 66 98 chr5 192597019 192597263 -7032887 - MER106A DNA MER1_type 0 236 1 292 270 16 63 chr5 192597368 192597494 -7032656 - L1MC/D LINE L1 -1988 5820 5701 4735 174 16 0 chr5 192597510 192598406 -7031744 - L1MD1 LINE L1 -1 6635 5726 2462 134 70 7 chr5 192598406 192598809 -7031341 + MSTA LTR MaLR 1 428 0 10225 147 26 9 chr5 192598809 192599351 -7030799 + MSTA-int LTR MaLR 1 532 -1119 2109 143 0 10 chr5 192599351 192599659 -7030491 + AluSx SINE Alu 3 307 -5 10225 147 26 9 chr5 192599659 192600740 -7029410 + MSTA-int LTR MaLR 532 1651 0 2199 126 85 5 chr5 192600740 192601128 -7029022 + MSTA LTR MaLR 1 419 -9 288 219 0 0 chr5 192601133 192601197 -7028953 - L1MD1 LINE L1 -906 5730 5667 1033 200 75 59 chr5 192601209 192601514 -7028636 - L1ME1 LINE L1 -5 6161 5852 47 44 0 0 chr5 192601520 192601588 -7028562 + AT_rich Low_complexity Low_complexity 1 68 0 3316 230 29 19 chr5 192601590 192602576 -7027574 - L1MD1 LINE L1 -880 5660 4665 464 254 7 22 chr5 192602572 192602710 -7027440 + L1M4 LINE L1 3949 4084 -2062 * 8828 213 66 41 chr5 192602724 192602948 -7027202 - L1MD1 LINE L1 -1883 4657 4440 2082 147 0 0 chr5 192602948 192603254 -7026896 - AluSx SINE Alu -2 310 5 8828 213 66 41 chr5 192603254 192604291 -7025859 - L1MD1 LINE L1 -2100 4440 3430 2681 102 13 5 chr5 192604291 192604663 -7025487 - THE1C LTR MaLR 0 375 1 10715 91 28 54 chr5 192604663 192604781 -7025369 - THE1C-int LTR MaLR 0 1580 1460 2306 118 0 0 chr5 192604781 192605086 -7025064 + AluSc SINE Alu 1 305 -4 10715 91 28 54 chr5 192605086 192606589 -7023561 - THE1C-int LTR MaLR -120 1460 1 2662 94 16 5 chr5 192606589 192606960 -7023190 - THE1C LTR MaLR 0 375 1 8828 213 66 41 chr5 192606960 192608975 -7021175 - L1MD1 LINE L1 -3110 3430 1466 2357 91 3 0 chr5 192608975 192609283 -7020867 - AluY SINE Alu -2 309 1 8828 213 66 41 chr5 192609283 192609603 -7020547 - L1MD1 LINE L1 -5074 1466 1155 1693 111 123 8 chr5 192609603 192609902 -7020248 - AluSg SINE Alu 0 328 1 8828 213 66 41 chr5 192609902 192610557 -7019593 - L1MD1 LINE L1 -5385 1155 282 810 130 36 0 chr5 192610557 192610695 -7019455 - L1MA3 LINE L1 0 6305 6163 8828 213 66 41 chr5 192610695 192610967 -7019183 - L1MD1 LINE L1 -6258 282 18 1977 131 25 0 chr5 192610986 192611290 -7018860 - AluSx SINE Alu 0 315 5 391 274 121 28 chr5 192611343 192611591 -7018559 - L1ME1 LINE L1 -2155 5653 5383 255 219 38 38 chr5 192611614 192611719 -7018431 - L2 LINE L2 -105 3208 3104 1791 244 31 40 chr5 192611731 192612279 -7017871 - LTR55 LTR ERV -5 543 1 552 272 182 45 chr5 192612288 192612904 -7017246 - L2 LINE L2 -229 3084 2356 569 260 23 16 chr5 192613268 192613456 -7016694 - MIR SINE MIR -62 146 2 784 194 51 37 chr5 192614122 192614339 -7015811 - L1MC5 LINE L1 -51 7910 7691 308 224 32 24 chr5 192614512 192614609 -7015541 - MIR SINE MIR -68 140 49 743 284 139 56 chr5 192614976 192615494 -7014656 - MLT1K LTR MaLR -9 579 19 298 245 28 114 chr5 192615796 192615945 -7014205 + MIR SINE MIR 38 174 -55 263 262 16 0 chr5 192616534 192616595 -7013555 + L2 LINE L2 3210 3271 -1 291 317 213 0 chr5 192617240 192617404 -7012746 + MIR SINE MIR 61 259 -3 439 138 213 0 chr5 192617527 192617621 -7012529 + MIR SINE MIR 77 190 -72 459 313 133 5 chr5 192617732 192617943 -7012207 - L3 LINE CR1 -60 1517 1280 201 265 0 0 chr5 192618289 192618338 -7011812 + MIR SINE MIR 142 190 -72 185 333 31 105 chr5 192619008 192619163 -7010987 - L3 LINE CR1 -7 1570 1428 392 325 12 43 chr5 192619163 192619326 -7010824 + MIR3 SINE MIR 1 158 -50 1232 258 55 59 chr5 192619580 192620092 -7010058 - MLT1J LTR MaLR -1 510 1 602 306 99 3 chr5 192620200 192620484 -7009666 - MLT1L LTR MaLR 0 615 305 240 224 48 128 chr5 192620615 192620740 -7009410 - MLT1L LTR MaLR -500 115 1 468 219 67 50 chr5 192620755 192620874 -7009276 - MIR SINE MIR -110 152 32 880 245 96 68 chr5 192620942 192621412 -7008738 + MER113 DNA MER1_type? 4 486 -35 1638 218 9 12 chr5 192621589 192621928 -7008222 - MER58B DNA MER1_type -3 338 1 980 203 6 0 chr5 192621958 192622135 -7008015 + MER45A DNA AcHobo 1 178 0 685 260 34 32 chr5 192622218 192622459 -7007691 - MLT1H LTR MaLR -198 211 2 1527 203 17 27 chr5 192622479 192622774 -7007376 + AluJo SINE Alu 1 292 -20 365 224 190 46 chr5 192623432 192623487 -7006663 - MLT1K LTR MaLR -37 551 505 2448 147 41 12 chr5 192623487 192623901 -7006249 + MSTA LTR MaLR 3 428 0 365 224 190 46 chr5 192623901 192624019 -7006131 - MLT1K LTR MaLR -83 505 353 816 290 52 10 chr5 192624022 192624312 -7005838 - MLT1K LTR MaLR -277 311 10 2205 130 27 0 chr5 192624802 192625103 -7005047 - AluSg SINE Alu -1 309 1 183 290 47 65 chr5 192625318 192625425 -7004725 + L2 LINE L2 3170 3274 -39 252 268 145 22 chr5 192625767 192625905 -7004245 + MIR3 SINE MIR 1 155 -53 224 242 32 16 chr5 192626570 192626632 -7003518 + L2 LINE L2 3206 3268 -4 1155 174 37 0 chr5 192626951 192627169 -7002981 - L1MB1 LINE L1 -5 6163 5938 620 220 44 33 chr5 192627344 192627526 -7002624 - MLT1K LTR MaLR 0 588 405 228 303 110 9 chr5 192628115 192628224 -7001926 + MIR SINE MIR 107 226 -36 283 277 0 0 chr5 192628251 192628316 -7001834 + MIR SINE MIR 86 150 -58 213 242 37 98 chr5 192628450 192628543 -7001607 - MIR SINE MIR -73 135 60 276 288 19 100 chr5 192628602 192628762 -7001388 + L2 LINE L2 3008 3154 -118 487 264 71 19 chr5 192628829 192629047 -7001103 + MIR SINE MIR 12 243 -19 359 292 44 9 chr5 192629046 192629159 -7000991 - MIR SINE MIR -69 193 77 * 187 273 239 0 chr5 192629682 192629770 -7000380 + MIR SINE MIR 40 148 -114 329 290 20 0 chr5 192630572 192630672 -6999478 + L3 LINE CR1 1396 1497 -80 399 266 204 2 chr5 192631241 192631616 -6998534 - MLT1K LTR MaLR -72 516 13 2449 72 0 0 chr5 192631678 192631969 -6998181 - AluY SINE Alu -20 291 1 1699 168 4 4 chr5 192631970 192632238 -6997912 - AluJo SINE Alu -11 301 34 3922 121 57 62 chr5 192632240 192633012 -6997138 - LTR1 LTR ERV1 0 785 18 1865 194 99 11 chr5 192633172 192633625 -6996525 + MLT1D LTR MaLR 1 493 -12 272 366 134 14 chr5 192633796 192634072 -6996078 + L2 LINE L2 2954 3262 -10 294 185 187 41 chr5 192634147 192634317 -6995833 + MLT1I LTR MaLR 13 207 -202 292 160 50 110 chr5 192634940 192635040 -6995110 + MLT1J1 LTR MaLR 346 439 -7 242 160 128 106 chr5 192635213 192635307 -6994843 - MIR SINE MIR -153 109 14 287 290 32 0 chr5 192635488 192635581 -6994569 - MIR SINE MIR -68 140 45 319 274 9 62 chr5 192636749 192636862 -6993288 - MIR3 SINE MIR -88 120 14 393 286 87 25 chr5 192637439 192637600 -6992550 + MER69A DNA AcHobo 3 173 -4 187 263 18 0 chr5 192637717 192637774 -6992376 - L2 LINE L2 -536 2778 2721 1373 287 142 24 chr5 192638909 192638992 -6991158 - MER115 DNA AcHobo 0 693 621 1205 246 127 36 chr5 192638992 192639489 -6990661 + MLT1F LTR MaLR 1 542 0 1373 287 142 24 chr5 192639489 192640025 -6990125 - MER115 DNA AcHobo -72 621 1 186 260 269 10 chr5 192640161 192640265 -6989885 - L2 LINE L2 -17 3255 3125 2970 136 24 6 chr5 192640513 192641012 -6989138 - L1MA4 LINE L1 -6 6294 5787 2501 112 3 3 chr5 192641012 192641369 -6988781 + THE1B LTR MaLR 1 357 -7 342 0 0 0 chr5 192641369 192641407 -6988743 + (TA)n Simple_repeat Simple_repeat 2 39 0 236 61 0 0 chr5 192641408 192641441 -6988709 - L1MA4 LINE L1 -523 5779 5747 * 1907 145 39 19 chr5 192641439 192641592 -6988558 + L1M1 LINE L1 5277 5426 -874 1291 217 89 63 chr5 192641592 192642086 -6988064 + MER84 LTR ERV1 1 507 0 1907 145 39 19 chr5 192642086 192642291 -6987859 + L1M1 LINE L1 5426 5642 -658 243 0 0 0 chr5 192642830 192642857 -6987293 + (A)n Simple_repeat Simple_repeat 1 27 0 256 252 223 36 chr5 192643192 192643331 -6986819 - MIR SINE MIR -10 252 88 267 31 0 0 chr5 192643812 192643844 -6986306 + (T)n Simple_repeat Simple_repeat 1 32 0 16020 22 3 0 chr5 192643941 192646560 -6983590 - L1PA3 LINE L1 0 6155 3531 452 199 72 83 chr5 192646578 192646759 -6983391 - LTR37A LTR ERV1 -210 216 38 2397 93 3 0 chr5 192646761 192647061 -6983089 - AluSc SINE Alu -8 301 1 853 110 15 37 chr5 192647211 192647347 -6982803 + AluSq/x SINE Alu 1 133 -180 253 299 11 35 chr5 192647417 192647504 -6982646 + MER5B DNA MER1_type 6 90 -88 2249 262 66 84 chr5 192647731 192647744 -6982406 + L2 LINE L2 1719 1731 -1582 180 0 0 0 chr5 192647744 192647764 -6982386 + (CACCC)n Simple_repeat Simple_repeat 5 24 0 2249 262 66 84 chr5 192647764 192648471 -6981679 + L2 LINE L2 1731 2449 -864 2400 108 0 0 chr5 192648471 192648777 -6981373 - AluSg SINE Alu -4 306 1 2249 262 66 84 chr5 192648777 192648827 -6981323 + L2 LINE L2 2449 2498 -815 1122 176 25 8 chr5 192648827 192649072 -6981078 - L1MA8 LINE L1 -10 6281 6033 2249 262 66 84 chr5 192649072 192649906 -6980244 + L2 LINE L2 2498 3295 -18 818 185 25 0 chr5 192649996 192650158 -6979992 - MER5A DNA MER1_type -23 166 1 745 307 71 0 chr5 192651008 192651233 -6978917 - MIR SINE MIR -5 257 17 580 229 46 46 chr5 192651866 192651887 -6978263 - MER20B DNA MER1_type -36 747 727 2207 87 24 0 chr5 192651887 192652175 -6977975 + AluSx SINE Alu 1 295 -17 580 229 46 46 chr5 192652175 192652393 -6977757 - MER20B DNA MER1_type -55 728 508 2248 123 7 62 chr5 192652804 192653220 -6976930 + MER57A LTR ERV1 1 393 -10 2383 96 0 10 chr5 192653315 192653628 -6976522 + AluSq SINE Alu 3 312 -1 2292 117 7 3 chr5 192653857 192654165 -6975985 + AluSp SINE Alu 1 309 -4 304 236 50 87 chr5 192654456 192654617 -6975533 - MER20B DNA MER1_type -572 211 57 1199 136 0 0 chr5 192654617 192654794 -6975356 + AluSg/x SINE Alu 132 308 -4 373 219 35 132 chr5 192654846 192654940 -6975210 - MER87 LTR ERV1 -40 516 415 2268 102 0 0 chr5 192654940 192655275 -6974875 - AluSx SINE Alu 0 335 1 373 219 35 132 chr5 192655275 192655312 -6974838 - MER87 LTR ERV1 -141 415 376 2470 71 10 0 chr5 192655312 192655608 -6974542 - AluSp SINE Alu -14 299 1 373 219 35 132 chr5 192655608 192655702 -6974448 - MER87 LTR ERV1 -180 376 311 315 226 16 0 chr5 192655974 192656036 -6974114 - MIR SINE MIR -111 151 89 2133 74 44 4 chr5 192656206 192656505 -6973645 + AluY SINE Alu 1 310 0 319 191 15 15 chr5 192656508 192656576 -6973574 + LTR24B LTR ERV1 10 77 -499 235 319 42 21 chr5 192656700 192656844 -6973306 + LTR24 LTR ERV1 178 324 -143 225 127 55 18 chr5 192656876 192656931 -6973219 + LTR24B LTR ERV1 513 569 -7 2245 127 0 7 chr5 192656975 192657282 -6972868 + AluSx SINE Alu 1 305 -7 699 268 34 38 chr5 192658314 192658579 -6971571 + L1MC5 LINE L1 7299 7562 -399 1064 192 4 41 chr5 192658588 192658833 -6971317 + MER106A DNA MER1_type 1 236 0 495 166 73 33 chr5 192658887 192659038 -6971112 + L1MC5 LINE L1 7591 7747 -214 530 257 61 0 chr5 192659184 192659332 -6970818 + Charlie8 DNA MER1_type 5 161 -2256 2700 202 23 61 chr5 192659467 192660169 -6969981 - LTR8 LTR ERV1 -16 675 1 2297 122 0 3 chr5 192660233 192660537 -6969613 + AluSq SINE Alu 1 303 -10 586 298 111 5 chr5 192660546 192660754 -6969396 - MIR SINE MIR -8 254 25 23 54 0 0 chr5 192660973 192661010 -6969140 + AT_rich Low_complexity Low_complexity 1 37 0 2324 201 26 78 chr5 192661024 192661397 -6968753 - MER97a DNA MER1_type? -208 686 362 2143 139 3 0 chr5 192661397 192661692 -6968458 + AluSx SINE Alu 1 296 -16 2324 201 26 78 chr5 192661692 192662000 -6968150 - MER97a DNA MER1_type? -532 362 40 305 204 283 35 chr5 192662149 192662262 -6967888 + MIR3 SINE MIR 6 146 -62 692 210 145 47 chr5 192662402 192662616 -6967534 - MIR SINE MIR 0 262 28 364 291 30 22 chr5 192663027 192663161 -6966989 - MIR SINE MIR -115 147 13 567 239 7 7 chr5 192664556 192664698 -6965452 - L3 LINE CR1 -42 1535 1394 485 305 14 7 chr5 192665033 192665174 -6964976 + MIR SINE MIR 26 167 -95 3152 151 71 84 chr5 192665198 192665773 -6964377 - LTR8A LTR ERV1 0 727 163 2435 91 0 0 chr5 192665773 192666070 -6964080 - AluSq SINE Alu -16 297 1 3152 151 71 84 chr5 192666070 192666231 -6963919 - LTR8A LTR ERV1 -564 163 1 303 221 189 0 chr5 192666352 192666447 -6963703 - HAL1b LINE L1 -3 1345 1233 214 368 37 9 chr5 192666519 192666662 -6963488 + MIR SINE MIR 7 151 -57 1460 137 117 23 chr5 192666662 192666702 -6963448 - L1MB8 LINE L1 0 6178 6143 2338 122 30 22 chr5 192666702 192667063 -6963087 - THE1B LTR MaLR 0 364 1 1460 137 117 23 chr5 192667063 192667329 -6962821 - L1MB8 LINE L1 -35 6143 5843 270 184 237 0 chr5 192667843 192667919 -6962231 - MIR SINE MIR -54 208 115 5140 152 21 32 chr5 192668105 192668793 -6961357 + L1MB3 LINE L1 5025 5691 -492 2175 118 0 0 chr5 192668793 192669080 -6961070 - AluSq SINE Alu -26 287 1 5140 152 21 32 chr5 192669080 192669566 -6960584 + L1MB3 LINE L1 5691 6181 -2 454 259 52 0 chr5 192669833 192669965 -6960185 - MIR SINE MIR -66 142 4 2254 101 3 3 chr5 192670070 192670368 -6959782 + AluSx SINE Alu 1 298 -14 411 272 34 20 chr5 192670408 192670555 -6959595 - L2 LINE L2 0 3313 3165 365 287 23 0 chr5 192671369 192671456 -6958694 - MIR SINE MIR -76 132 44 1932 137 20 10 chr5 192671509 192671809 -6958341 + AluSx SINE Alu 1 303 -9 38 0 0 0 chr5 192671809 192671847 -6958303 + AT_rich Low_complexity Low_complexity 1 38 0 402 289 44 7 chr5 192671881 192672016 -6958134 - MIR SINE MIR 0 262 123 1822 154 13 13 chr5 192672237 192672536 -6957614 - AluJo SINE Alu -13 299 1 351 277 84 17 chr5 192672777 192672896 -6957254 + MIR SINE MIR 81 207 -55 567 254 0 8 chr5 192672896 192673026 -6957124 - MER58B DNA MER1_type 0 341 213 304 229 0 0 chr5 192673024 192673085 -6957065 - MER58B DNA MER1_type -280 61 1 * 472 198 36 13 chr5 192673114 192673327 -6956823 + ORSL DNA AcHobo 2 274 -1 1419 206 63 44 chr5 192673401 192673784 -6956366 - MLT1B LTR MaLR 0 390 1 447 348 99 9 chr5 192673834 192674067 -6956083 + MIR SINE MIR 5 258 -4 214 147 0 0 chr5 192674067 192674101 -6956049 + (ATGGTG)n Simple_repeat Simple_repeat 1 34 0 846 190 2 4 chr5 192674101 192674419 -6955731 + (ATG)n Simple_repeat Simple_repeat 1 318 -528 1639 171 7 115 chr5 192674419 192674828 -6955322 + MLT1A1 LTR MaLR 1 365 0 846 190 2 4 chr5 192674828 192674949 -6955201 + (ATG)n Simple_repeat Simple_repeat 318 846 0 1618 265 82 47 chr5 192675163 192675849 -6954301 - MER21B LTR ERV1 -137 726 17 2395 163 67 7 chr5 192676086 192676516 -6953634 - LTR32 LTR ERVL -1 470 15 268 234 0 0 chr5 192676739 192676786 -6953364 + MIR SINE MIR 59 105 -157 255 326 62 16 chr5 192677554 192677683 -6952467 - MLT1I LTR MaLR -175 234 100 1816 124 65 46 chr5 192678300 192678606 -6951544 + AluJo SINE Alu 1 312 0 905 280 8 15 chr5 192678615 192678876 -6951274 - MIR SINE MIR 0 262 4 2200 88 53 108 chr5 192679339 192679390 -6950760 - THE1C LTR MaLR 0 375 323 1951 99 4 22 chr5 192679390 192679706 -6950444 - AluSc SINE Alu 0 323 13 2200 88 53 108 chr5 192679706 192680050 -6950100 - THE1C LTR MaLR -52 323 1 227 303 22 22 chr5 192680124 192680213 -6949937 - L2 LINE L2 0 3313 3225 293 366 23 7 chr5 192680795 192680979 -6949171 + MIR SINE MIR 20 201 -61 684 329 35 24 chr5 192681075 192681330 -6948820 - MIR SINE MIR -3 259 2 315 279 220 56 chr5 192681484 192681747 -6948403 - L2 LINE L2 -379 2935 2602 928 119 4 187 chr5 192681747 192681982 -6948168 + 7SK RNA RNA 1 192 -1 315 279 220 56 chr5 192681982 192682059 -6948091 - L2 LINE L2 -712 2602 2539 339 300 82 29 chr5 192682191 192682361 -6947789 + MIR SINE MIR 10 188 -74 585 281 70 66 chr5 192682411 192682613 -6947537 - MIR SINE MIR -13 249 44 2127 88 30 14 chr5 192682613 192682910 -6947240 + AluY SINE Alu 1 302 -9 585 281 70 66 chr5 192682910 192682949 -6947201 - MIR SINE MIR -218 44 7 522 272 169 54 chr5 192682949 192683356 -6946794 - MLT1L LTR MaLR -3 612 159 534 259 91 28 chr5 192683356 192683596 -6946554 + MLT1G LTR MaLR 1 267 -303 384 257 102 75 chr5 192683751 192683977 -6946173 + L2 LINE L2 3075 3306 -7 393 265 66 22 chr5 192684214 192684350 -6945800 - MIR SINE MIR -32 230 89 211 256 0 0 chr5 192684462 192684501 -6945649 - L3 LINE CR1 -107 1470 1432 240 275 123 118 chr5 192685528 192685739 -6944411 - L2 LINE L2 -6 3266 3055 2471 181 9 5 chr5 192685813 192686245 -6943905 - Tigger2a DNA MER2_type 0 434 1 1200 278 105 26 chr5 192686953 192687420 -6942730 - L2 LINE L2 -3 3310 2807 2393 109 0 0 chr5 192687616 192687920 -6942230 - AluSx SINE Alu -6 306 3 6115 161 25 14 chr5 192688074 192689236 -6940914 + L1PB4 LINE L1 3954 5157 -999 2319 118 0 0 chr5 192689236 192689540 -6940610 + AluSq SINE Alu 1 304 -9 6115 161 25 14 chr5 192689540 192690552 -6939598 + L1PB4 LINE L1 5157 6156 0 2427 95 3 3 chr5 192690625 192690931 -6939219 - AluSp SINE Alu -7 306 1 2047 151 113 32 chr5 192691347 192691779 -6938371 + MLT1C LTR MaLR 1 467 0 191 329 55 0 chr5 192691835 192691908 -6938242 - L2 LINE L2 0 3272 3196 2375 77 17 3 chr5 192692186 192692484 -6937666 - AluSc SINE Alu -7 302 1 322 293 20 0 chr5 192692489 192692588 -6937562 - MER5B DNA MER1_type -77 101 1 522 280 118 5 chr5 192692650 192692860 -6937290 - MIR SINE MIR 0 262 23 792 281 13 26 chr5 192693182 192693413 -6936737 + MIR SINE MIR 2 229 -33 277 261 109 22 chr5 192693523 192693615 -6936535 + LTR33 LTR ERVL 90 189 -332 417 213 71 46 chr5 192693659 192693856 -6936294 + LTR33 LTR ERVL 302 503 -18 240 86 0 0 chr5 192694514 192694549 -6935601 + (TC)n Simple_repeat Simple_repeat 1 35 0 493 295 93 17 chr5 192694871 192695108 -6935042 - MIR SINE MIR -1 261 7 253 282 35 29 chr5 192695326 192695496 -6934654 + L1ME LINE L1 4556 4726 -1420 256 232 71 0 chr5 192695500 192695556 -6934594 - L2 LINE L2 -2 3311 3252 588 268 44 11 chr5 192695752 192695935 -6934215 - MIR SINE MIR -62 200 12 423 348 65 35 chr5 192695967 192696284 -6933866 + L1ME LINE L1 4882 5224 -922 1677 199 7 10 chr5 192696324 192696630 -6933520 + AluJb SINE Alu 1 305 -7 405 230 28 0 chr5 192696865 192696989 -6933161 + L1MC4a LINE L1 5726 5858 -263 26 30 0 0 chr5 192697006 192697039 -6933111 + AT_rich Low_complexity Low_complexity 1 33 0 234 105 0 0 chr5 192697039 192697077 -6933073 + (TG)n Simple_repeat Simple_repeat 2 39 0 669 256 123 0 chr5 192697081 192697179 -6932971 + MIR SINE MIR 36 121 -141 2475 82 0 0 chr5 192697179 192697482 -6932668 + AluSx SINE Alu 1 303 -9 669 256 123 0 chr5 192697482 192697578 -6932572 + MIR SINE MIR 121 254 -8 1577 177 35 45 chr5 192698040 192698350 -6931800 + AluJb SINE Alu 6 312 0 289 283 93 69 chr5 192698390 192698501 -6931649 + L1ME LINE L1 5361 5468 -653 2413 97 0 0 chr5 192698501 192698809 -6931341 - AluSg SINE Alu -2 308 1 289 283 93 69 chr5 192698809 192698989 -6931161 + L1ME LINE L1 5468 5640 -481 2288 122 0 3 chr5 192698989 192699293 -6930857 + AluSq SINE Alu 1 303 -10 289 283 93 69 chr5 192699293 192699399 -6930751 + L1ME LINE L1 5640 5742 -379 1425 217 55 40 chr5 192699422 192699749 -6930401 + MLT1E LTR MaLR 24 391 -202 1906 212 25 25 chr5 192699749 192700145 -6930005 - MSTD LTR MaLR 0 396 1 1425 217 55 40 chr5 192700145 192700350 -6929800 + MLT1E LTR MaLR 391 592 -1 236 253 24 36 chr5 192700821 192700904 -6929246 + LTR67 LTR ERVL 92 173 -384 * 263 197 42 42 chr5 192700845 192700916 -6929234 + MLT1J LTR MaLR 110 180 -331 215 351 42 77 chr5 192700960 192701128 -6929022 - L2 LINE L2 -94 3178 3017 304 322 77 13 chr5 192701259 192701470 -6928680 - MLT1L LTR MaLR -6 609 277 243 220 17 0 chr5 192701571 192701630 -6928520 - MLT1J LTR MaLR -342 169 110 1166 237 18 14 chr5 192702066 192702345 -6927805 - MLT2D LTR ERVL -132 282 3 2351 153 75 5 chr5 192702390 192702788 -6927362 - MSTB LTR MaLR 0 426 1 8591 165 24 57 chr5 192702788 192704260 -6925890 - MSTB-int LTR MaLR -1 1650 131 1073 78 22 17 chr5 192704260 192704439 -6925711 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1625 136 3 76 chr5 192704440 192704741 -6925409 - AluSx SINE Alu -33 279 1 8591 165 24 57 chr5 192704741 192704971 -6925179 - MSTB-int LTR MaLR -1519 132 2 2407 153 62 7 chr5 192704972 192705376 -6924774 - MSTB LTR MaLR 0 426 1 253 229 165 28 chr5 192705385 192705494 -6924656 + MIR SINE MIR 133 256 -6 205 316 86 7 chr5 192706137 192706276 -6923874 + L2 LINE L2 2942 3091 -181 589 286 118 0 chr5 192706314 192706534 -6923616 + MIR SINE MIR 8 253 -9 684 310 168 10 chr5 192707347 192707848 -6922302 + L2 LINE L2 2719 3313 0 739 226 94 54 chr5 192708107 192708402 -6921748 - MLT1H LTR MaLR -228 320 8 660 270 66 55 chr5 192708514 192708803 -6921347 - MLT1I LTR MaLR -24 385 94 193 316 228 0 chr5 192708859 192709052 -6921098 - L3 LINE CR1 -160 1417 1181 222 302 161 29 chr5 192709133 192709338 -6920812 + L2 LINE L2 2810 3041 -231 1205 287 70 27 chr5 192709412 192709580 -6920570 - L2 LINE L2 0 3313 3154 2134 123 3 0 chr5 192709580 192709939 -6920211 + AluSg SINE Alu 1 310 0 1205 287 70 27 chr5 192709939 192710462 -6919688 - L2 LINE L2 -159 3154 2584 317 293 24 30 chr5 192711305 192711469 -6918681 + GA-rich Low_complexity Low_complexity 1 163 0 216 0 0 0 chr5 192711491 192711515 -6918635 + (GA)n Simple_repeat Simple_repeat 1 24 0 282 250 16 45 chr5 192711846 192711982 -6918168 + MIR SINE MIR 47 181 -56 236 224 35 0 chr5 192712810 192712868 -6917282 + MIR SINE MIR 105 164 -98 450 342 22 13 chr5 192713004 192713229 -6916921 - MIR SINE MIR -6 256 30 275 395 90 11 chr5 192713666 192713843 -6916307 + L3b LINE CR1 1287 1477 -106 486 217 70 14 chr5 192714049 192714192 -6915958 + L1ME4a LINE L1 5963 6113 -8 247 388 45 29 chr5 192714460 192714705 -6915445 + L2 LINE L2 2725 2973 -341 2105 88 7 7 chr5 192715298 192715608 -6914542 + AluSg SINE Alu 1 310 0 1325 174 14 0 chr5 192715814 192716027 -6914123 + MER20 DNA MER1_type 4 219 0 4021 173 40 24 chr5 192716199 192717038 -6913112 - L1MB7 LINE L1 0 6184 5332 522 254 8 8 chr5 192717398 192717532 -6912618 + MIR3 SINE MIR 71 204 -4 297 350 10 0 chr5 192717846 192717946 -6912204 - L2 LINE L2 0 3313 3213 1508 148 11 22 chr5 192718226 192718496 -6911654 - AluJo SINE Alu -45 267 1 321 280 200 10 chr5 192719521 192719721 -6910429 + MER102b DNA MER1_type 102 339 -2 1822 142 3 13 chr5 192719986 192720288 -6909862 - AluJb SINE Alu -13 299 1 251 296 23 8 chr5 192720527 192720659 -6909491 - L1MC4a LINE L1 -1797 6011 5878 226 283 123 48 chr5 192720686 192720720 -6909430 - L1ME4a LINE L1 -31 6090 6060 2081 123 0 43 chr5 192720720 192721045 -6909105 + AluSq SINE Alu 1 311 -2 226 283 123 48 chr5 192721045 192721410 -6908740 - L1ME4a LINE L1 -61 6060 5661 243 268 46 65 chr5 192721446 192721599 -6908551 + L1MC5 LINE L1 7758 7907 -54 314 306 74 8 chr5 192722036 192722157 -6907993 - MIR SINE MIR -85 177 49 841 200 19 0 chr5 192722542 192722702 -6907448 - FRAM SINE Alu -3 163 1 358 299 66 77 chr5 192722734 192722911 -6907239 - L1MC5 LINE L1 -54 7907 7730 2276 113 0 0 chr5 192722911 192723222 -6906928 - AluSx SINE Alu -1 311 1 358 299 66 77 chr5 192723222 192723409 -6906741 - L1MC5 LINE L1 -231 7730 7547 658 173 0 0 chr5 192723729 192723833 -6906317 + FLAM_A SINE Alu 20 123 -19 396 291 30 8 chr5 192723836 192723970 -6906180 - MER102b DNA MER1_type -183 158 22 283 330 11 0 chr5 192724026 192724117 -6906033 + L3 LINE CR1 1421 1512 -65 211 286 24 12 chr5 192724466 192724550 -6905600 - L2 LINE L2 -65 3248 3164 183 129 0 0 chr5 192725061 192725092 -6905058 + (ATGGTG)n Simple_repeat Simple_repeat 2 32 0 329 300 0 0 chr5 192725449 192725539 -6904611 + L3 LINE CR1 1419 1508 -69 467 277 66 12 chr5 192725641 192725807 -6904343 - MIR3 SINE MIR -26 182 8 526 295 17 6 chr5 192725985 192726158 -6903992 + MIR SINE MIR 87 261 -1 203 350 22 67 chr5 192726264 192726444 -6903706 - L2 LINE L2 -94 3178 3007 259 348 13 19 chr5 192726472 192726630 -6903520 - L2 LINE L2 -377 2937 2781 455 256 105 63 chr5 192726691 192726976 -6903174 - L2 LINE L2 -669 2645 2349 1259 190 4 8 chr5 192727017 192727254 -6902896 + L1MB5 LINE L1 5929 6164 -10 2169 101 7 3 chr5 192727255 192727563 -6902587 - AluSx SINE Alu -3 309 1 264 234 0 0 chr5 192727577 192727641 -6902509 + L1M1 LINE L1 2898 2961 -4604 330 253 63 14 chr5 192727781 192727893 -6902257 + MIR SINE MIR 35 148 -63 709 272 0 11 chr5 192728573 192728757 -6901393 + MIR SINE MIR 16 197 -65 193 295 98 0 chr5 192728815 192728876 -6901274 + MIR SINE MIR 27 93 -115 275 331 38 16 chr5 192729360 192729490 -6900660 - L1MC4a LINE L1 -14 2493 2382 233 226 19 0 chr5 192729733 192729786 -6900364 - L1ME LINE L1 -469 5652 5599 1566 200 44 82 chr5 192730150 192730543 -6899607 - L1PB4 LINE L1 -1 6155 5786 1726 180 20 0 chr5 192730543 192730843 -6899307 - AluJo SINE Alu -2 310 5 1566 200 44 82 chr5 192730843 192730972 -6899178 - L1PB4 LINE L1 -370 5786 5654 640 298 25 29 chr5 192731872 192732117 -6898033 - MIR SINE MIR -3 259 16 198 250 71 0 chr5 192732140 192732196 -6897954 + MIR SINE MIR 121 180 -82 481 259 70 7 chr5 192732951 192733094 -6897056 - L2 LINE L2 -223 3049 2898 458 239 108 0 chr5 192733462 192733592 -6896558 + MIR SINE MIR 48 191 -71 366 312 9 18 chr5 192734373 192734482 -6895668 + L2 LINE L2 3197 3304 -9 201 240 0 20 chr5 192735109 192735159 -6894991 - MIR3 SINE MIR -6 202 154 1283 224 62 7 chr5 192735474 192735778 -6894372 + MER58B DNA MER1_type 17 337 -4 244 362 43 9 chr5 192735873 192735989 -6894161 - L2 LINE L2 -1 3312 3193 252 309 44 39 chr5 192735992 192736173 -6893977 - L3 LINE CR1 -345 1232 1051 189 0 0 0 chr5 192736650 192736671 -6893479 + (A)n Simple_repeat Simple_repeat 1 21 0 298 329 98 7 chr5 192737966 192738109 -6892041 - MIR SINE MIR -30 232 77 184 200 0 0 chr5 192738326 192738356 -6891794 - L2 LINE L2 -16 3256 3227 209 254 60 0 chr5 192738882 192738949 -6891201 + MIR SINE MIR 186 256 -6 246 62 0 0 chr5 192739010 192739042 -6891108 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 200 385 0 0 chr5 192739044 192739109 -6891041 - L2 LINE L2 -14 3299 3235 296 247 86 0 chr5 192739159 192739252 -6890898 + MIR3 SINE MIR 56 156 -52 460 274 0 0 chr5 192740294 192740407 -6889743 - MIR SINE MIR -70 192 80 1439 220 120 41 chr5 192741407 192741875 -6888275 - MLT1D LTR MaLR 0 505 1 228 259 55 36 chr5 192742137 192742233 -6887917 - MIR SINE MIR -90 118 21 291 315 35 14 chr5 192742278 192742421 -6887729 - MIR3 SINE MIR -45 163 18 534 223 38 32 chr5 192742893 192743050 -6887100 + L2 LINE L2 3156 3313 0 298 318 28 0 chr5 192743856 192743963 -6886187 + MIR SINE MIR 44 153 -109 237 65 0 0 chr5 192744088 192744119 -6886031 + (CCTG)n Simple_repeat Simple_repeat 2 32 0 1025 242 50 42 chr5 192744139 192744499 -6885651 - L1MB8 LINE L1 -2 6176 5814 2074 106 65 0 chr5 192745159 192745452 -6884698 + AluSx SINE Alu 1 312 0 426 265 102 0 chr5 192745467 192745614 -6884536 - MER91A DNA MER1_type -30 166 5 1162 192 70 16 chr5 192745656 192745955 -6884195 - MER58B DNA MER1_type 0 341 4 588 230 104 3 chr5 192745965 192746159 -6883991 + MIR SINE MIR 43 262 0 399 218 53 68 chr5 192746559 192746692 -6883458 + MIR SINE MIR 17 147 -61 347 288 6 55 chr5 192747512 192747675 -6882475 + MIR SINE MIR 45 199 -63 648 247 19 6 chr5 192748812 192748970 -6881180 + MIR SINE MIR 79 238 -24 277 313 40 27 chr5 192749053 192749203 -6880947 - L1MB8 LINE L1 -414 5707 5556 412 285 76 0 chr5 192749520 192749664 -6880486 + MIR SINE MIR 38 192 -70 219 281 44 89 chr5 192749989 192750124 -6880026 + MIR SINE MIR 63 191 -71 504 286 32 27 chr5 192750293 192750478 -6879672 + MIR SINE MIR 69 254 -8 217 360 0 0 chr5 192750534 192750620 -6879530 + MIR SINE MIR 56 141 -121 2511 43 0 0 chr5 192750740 192751041 -6879109 + AluY SINE Alu 1 301 -10 202 289 108 44 chr5 192751331 192751535 -6878615 + L2 LINE L2 2848 3064 -208 352 380 74 8 chr5 192751883 192752125 -6878025 + MIR SINE MIR 2 259 -3 2363 64 0 7 chr5 192753121 192753422 -6876728 - AluY SINE Alu 0 311 10 370 286 43 105 chr5 192753957 192754165 -6875985 - L2 LINE L2 -74 3198 3012 2149 92 11 14 chr5 192754165 192754469 -6875681 + AluSg SINE Alu 1 303 0 370 286 43 105 chr5 192754469 192754563 -6875587 - L2 LINE L2 -260 3012 2914 375 204 43 32 chr5 192754657 192754750 -6875400 - MIR SINE MIR -79 183 90 993 282 53 32 chr5 192754854 192755349 -6874801 - MLT1K LTR MaLR -3 585 35 335 44 0 0 chr5 192755540 192755585 -6874565 - MADE1 DNA Mariner -1 79 35 1944 286 120 37 chr5 192755864 192756104 -6874046 + L1MB3 LINE L1 2110 2329 -3817 2426 68 3 53 chr5 192756104 192756425 -6873725 - AluY SINE Alu -6 305 1 1944 286 120 37 chr5 192756425 192757458 -6872692 + L1MB3 LINE L1 2329 3275 -2871 628 146 10 0 chr5 192757458 192757561 -6872589 + U6 snRNA snRNA 3 106 -1 1944 286 120 37 chr5 192757561 192758379 -6871771 + L1MB3 LINE L1 3275 4375 -1771 247 318 0 20 chr5 192758393 192758541 -6871609 - L1M4 LINE L1 -1672 4474 4330 553 255 174 4 chr5 192758633 192758892 -6871258 + L1MB3 LINE L1 4522 4824 -1322 486 269 72 0 chr5 192758909 192759076 -6871074 + L1MB3 LINE L1 5670 5848 -335 267 182 0 91 chr5 192759168 192759223 -6870927 - MER66B LTR ERV1 -141 345 296 2118 107 0 66 chr5 192759225 192759542 -6870608 - AluJb SINE Alu -16 296 1 1961 138 0 29 chr5 192760707 192761019 -6869131 + AluJo SINE Alu 9 311 -1 271 309 0 0 chr5 192761047 192761131 -6869019 - MIR SINE MIR -85 123 40 185 62 0 31 chr5 192761951 192761983 -6868167 + (GGAAA)n Simple_repeat Simple_repeat 4 34 0 431 263 91 29 chr5 192761985 192762160 -6867990 - MIR SINE MIR -6 256 71 310 182 15 15 chr5 192762142 192762208 -6867942 + L2 LINE L2 3248 3313 0 * 241 309 146 54 chr5 192762719 192763383 -6866767 + L2 LINE L2 2001 2725 -589 483 305 86 56 chr5 192763576 192763845 -6866305 + L2 LINE L2 2994 3270 -2 331 355 13 13 chr5 192765380 192765532 -6864618 - L2 LINE L2 -507 2807 2656 275 266 18 0 chr5 192766029 192766122 -6864028 - MIR3 SINE MIR -52 156 60 245 264 76 76 chr5 192766974 192767171 -6862979 - L1MC/D LINE L1 -1933 5875 5679 243 0 0 0 chr5 192767191 192767218 -6862932 + (TG)n Simple_repeat Simple_repeat 2 28 0 355 283 84 49 chr5 192767584 192767900 -6862250 - MLT1H LTR MaLR -16 533 91 287 241 130 19 chr5 192768638 192768746 -6861404 - Charlie8 DNA MER1_type -2184 233 114 233 297 0 0 chr5 192768749 192768823 -6861327 + MIR SINE MIR 179 252 -10 214 238 0 0 chr5 192768837 192768879 -6861271 + GA-rich Low_complexity Low_complexity 2 43 0 274 283 40 10 chr5 192769495 192769594 -6860556 + MIR SINE MIR 121 222 -40 1080 145 79 26 chr5 192771335 192771563 -6858587 - L1MB7 LINE L1 -16 6168 5929 1359 178 38 115 chr5 192772018 192772523 -6857627 + LTR37B LTR ERV1 1 466 -2 2275 109 0 6 chr5 192772734 192773045 -6857105 - AluSx SINE Alu -1 311 3 5293 27 0 0 chr5 192773560 192774229 -6855921 + L1P LINE L1 3115 3783 -2363 315 263 18 35 chr5 192774393 192774507 -6855643 - MIR SINE MIR -70 192 81 264 307 74 3 chr5 192774787 192774977 -6855173 + MIR SINE MIR 35 245 -17 264 283 150 64 chr5 192775406 192775593 -6854557 - L2 LINE L2 -19 3294 3092 265 306 16 16 chr5 192775940 192776064 -6854086 + CT-rich Low_complexity Low_complexity 2 125 0 2359 117 0 0 chr5 192776078 192776387 -6853763 - AluSq SINE Alu -4 309 1 180 302 198 9 chr5 192777042 192777148 -6853002 + MIR SINE MIR 87 212 -50 260 220 17 0 chr5 192777181 192777240 -6852910 - MLT1K LTR MaLR -12 576 517 279 336 7 42 chr5 192777486 192777629 -6852521 - MLT1K LTR MaLR -417 171 34 399 321 57 88 chr5 192777704 192777966 -6852184 + L2 LINE L2 3019 3272 0 279 223 11 49 chr5 192777966 192778150 -6852000 + (TGGA)n Simple_repeat Simple_repeat 2 178 0 382 324 87 6 chr5 192778171 192778344 -6851806 - L2 LINE L2 -954 2360 2174 321 214 50 20 chr5 192779117 192779216 -6850934 - MIR3 SINE MIR -33 175 73 263 326 93 26 chr5 192779328 192779521 -6850629 - MIR SINE MIR -1 261 56 249 296 25 0 chr5 192779618 192779699 -6850451 + MIR SINE MIR 66 148 -114 2308 100 17 0 chr5 192779799 192780100 -6850050 + AluSc SINE Alu 1 306 -3 252 0 0 0 chr5 192780622 192780650 -6849500 + (A)n Simple_repeat Simple_repeat 1 28 0 1516 281 63 12 chr5 192781527 192782033 -6848117 - MLT1K LTR MaLR -22 566 35 2040 95 14 25 chr5 192782163 192782470 -6847680 + AluSx SINE Alu 1 304 0 192 222 22 0 chr5 192782602 192782647 -6847503 - L2 LINE L2 -82 3190 3145 454 301 286 9 chr5 192782960 192783292 -6846858 + L3 LINE CR1 1142 1565 -12 229 315 0 0 chr5 192783313 192783386 -6846764 + MIR SINE MIR 53 125 -83 312 313 70 6 chr5 192783886 192784047 -6846103 - MIR SINE MIR -72 190 20 255 227 128 32 chr5 192784413 192784538 -6845612 - MIR SINE MIR -63 145 6 420 269 46 8 chr5 192784969 192785099 -6845051 - MIR SINE MIR -77 185 51 274 305 0 0 chr5 192785793 192785888 -6844262 + (TG)n Simple_repeat Simple_repeat 2 96 0 385 234 117 31 chr5 192785981 192786109 -6844041 - MIR3 SINE MIR -63 145 7 274 345 25 94 chr5 192786366 192786641 -6843509 - L2 LINE L2 -85 3187 2932 255 291 23 105 chr5 192786915 192787087 -6843063 - MIR SINE MIR -23 239 82 2251 132 0 3 chr5 192787565 192787875 -6842275 + AluSq SINE Alu 1 309 -4 313 278 95 91 chr5 192788012 192788264 -6841886 - L2 LINE L2 -53 3219 2967 430 263 76 45 chr5 192788761 192788973 -6841177 + MIR SINE MIR 2 216 -46 449 300 62 65 chr5 192789034 192789284 -6840866 - L2 LINE L2 -1 3271 3020 2144 101 0 11 chr5 192789284 192789604 -6840546 + AluY SINE Alu 1 317 0 449 300 62 65 chr5 192789604 192789705 -6840445 - L2 LINE L2 -252 3020 2920 1023 164 49 13 chr5 192790048 192790274 -6839876 + L1 LINE L1 3533 3766 -2380 2286 126 0 3 chr5 192790398 192790732 -6839418 - AluSx SINE Alu 0 333 1 2501 46 0 0 chr5 192790762 192791081 -6839069 + AluY SINE Alu 1 319 0 290 328 48 11 chr5 192791138 192791327 -6838823 - MLT1K LTR MaLR -114 474 279 196 289 0 0 chr5 192791551 192791603 -6838547 - MIR SINE MIR -100 162 111 192 234 0 0 chr5 192791830 192791877 -6838273 - MIR SINE MIR -84 124 78 327 317 20 0 chr5 192792401 192792502 -6837648 + MIR SINE MIR 48 150 -112 356 304 12 50 chr5 192792535 192792696 -6837454 - L2 LINE L2 -40 3273 3119 2410 45 38 7 chr5 192792965 192793257 -6836893 - AluY SINE Alu -10 301 1 197 339 110 8 chr5 192794145 192794272 -6835878 + L2 LINE L2 2721 2860 -454 293 325 41 16 chr5 192794331 192794454 -6835696 + L2 LINE L2 3173 3298 -15 946 229 9 14 chr5 192794805 192795009 -6835141 + MLT1K LTR MaLR 86 290 -298 594 75 0 0 chr5 192795009 192795089 -6835061 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 660 99 16 16 chr5 192795098 192795219 -6834931 + (TTTC)n Simple_repeat Simple_repeat 3 123 0 573 184 147 7 chr5 192795221 192795357 -6834793 - AluJo/FRAM SINE Alu -2 310 156 * 654 110 0 0 chr5 192795352 192795443 -6834707 - AluJ/FLAM SINE Alu -220 92 2 832 268 57 12 chr5 192795462 192795708 -6834442 + MLT1K LTR MaLR 301 557 -31 476 293 69 6 chr5 192796726 192796900 -6833250 + LTR33 LTR ERVL 10 194 -327 226 261 54 0 chr5 192797250 192797342 -6832808 - MLT1J2 LTR MaLR -307 143 47 423 268 28 20 chr5 192797504 192797652 -6832498 + MIR SINE MIR 30 177 -56 404 309 163 12 chr5 192797761 192797898 -6832252 - L2 LINE L2 -6 3307 3192 2155 144 11 3 chr5 192797898 192798258 -6831892 + MER47A DNA MER2_type 4 366 0 404 309 163 12 chr5 192798258 192798605 -6831545 - L2 LINE L2 -121 3192 2734 504 291 75 15 chr5 192799193 192799392 -6830758 + MIR SINE MIR 46 256 -6 786 217 49 0 chr5 192799399 192799583 -6830567 - MIR SINE MIR -54 208 16 1463 262 128 28 chr5 192799749 192800242 -6829908 + MLT1K LTR MaLR 41 582 -6 432 341 91 0 chr5 192800242 192800418 -6829732 - MIR SINE MIR -39 223 32 490 333 20 7 chr5 192800653 192800806 -6829344 + L2 LINE L2 3118 3272 0 476 246 29 7 chr5 192801074 192801212 -6828938 - MIR SINE MIR -16 246 106 324 262 41 16 chr5 192801514 192801636 -6828514 + MIR3 SINE MIR 5 129 -79 336 343 54 0 chr5 192801717 192801921 -6828229 - MIR SINE MIR -27 235 21 761 287 79 34 chr5 192802357 192802737 -6827413 + MER113 DNA MER1_type? 1 397 -124 355 300 27 53 chr5 192803009 192803159 -6826991 + MIR SINE MIR 97 242 -20 194 273 61 0 chr5 192803317 192803383 -6826767 + MIR SINE MIR 109 178 -84 214 273 18 0 chr5 192804098 192804153 -6825997 - MIR SINE MIR -110 152 97 567 265 41 0 chr5 192804955 192805102 -6825048 + MER103 DNA DNA 9 161 -5 817 291 68 22 chr5 192806544 192807107 -6823043 + L2 LINE L2 2678 3270 -43 417 320 62 16 chr5 192807111 192807355 -6822795 + L2 LINE L2 2830 3084 -188 231 170 21 0 chr5 192807622 192807669 -6822481 + L2 LINE L2 3221 3268 -4 211 284 0 37 chr5 192808425 192808506 -6821644 + L2 LINE L2 2682 2759 -555 286 313 50 20 chr5 192808609 192808757 -6821393 - MIR SINE MIR -70 138 40 300 306 10 10 chr5 192808966 192809064 -6821086 + MIR SINE MIR 36 133 -75 603 295 18 12 chr5 192809174 192809340 -6820810 - MIR3 SINE MIR -27 181 15 238 356 0 0 chr5 192809836 192809909 -6820241 + MIR SINE MIR 37 109 -153 * 648 257 177 24 chr5 192809905 192810450 -6819700 - L2 LINE L2 0 3313 2684 570 310 134 41 chr5 192810832 192811296 -6818854 + L2 LINE L2 2804 3310 -3 330 315 140 6 chr5 192813201 192813379 -6816771 + MIR SINE MIR 50 251 -11 398 263 183 11 chr5 192813749 192813924 -6816226 - MIR SINE MIR -56 206 2 223 301 78 19 chr5 192814608 192814711 -6815439 + MIR SINE MIR 38 146 -62 2148 82 4 4 chr5 192816068 192816390 -6813760 + AluSx SINE Alu 1 322 0 677 194 8 45 chr5 192816458 192816592 -6813558 + FLAM_A SINE Alu 1 129 -4 1238 160 6 6 chr5 192866760 192867327 -6762823 - ALR/Alpha Satellite centromeric -1 566 1 1230 148 0 12 chr5 192867431 192868004 -6762146 - ALR/Alpha Satellite centromeric 0 566 1 1305 125 1 10 chr5 192868081 192868973 -6761177 - ALR/Alpha Satellite centromeric 0 883 1 1348 151 10 16 chr5 192869074 192871387 -6758763 + ALR/Alpha Satellite centromeric 1 2298 -61 1241 123 4 7 chr5 192871527 192873465 -6756685 + ALR/Alpha Satellite centromeric 1 2521 -217 4943 47 0 0 chr5 192873465 192874057 -6756093 + L1PA3 LINE L1 5561 6152 -3 1241 123 4 7 chr5 192874057 192874212 -6755938 + ALR/Alpha Satellite centromeric 2521 2675 -63 941 139 4 17 chr5 192874288 192874573 -6755577 + ALR/Alpha Satellite centromeric 1 281 -11 919 177 143 10 chr5 192874682 192874891 -6755259 - MSTA LTR MaLR -191 237 1 891 240 52 37 chr5 192874895 192875220 -6754930 - L1MC4 LINE L1 -164 7878 7549 305 130 0 0 chr5 192875533 192875579 -6754571 - MLT2F LTR ERVL 0 663 618 40 97 0 0 chr5 192875753 192875877 -6754273 + AT_rich Low_complexity Low_complexity 1 124 0 1941 138 4 0 chr5 192875880 192876155 -6753995 + AluSx SINE Alu 6 281 -31 1864 122 3 27 chr5 192876435 192876731 -6753419 + AluSx SINE Alu 1 289 -23 2139 105 13 10 chr5 192877188 192877492 -6752658 + AluSq SINE Alu 1 305 -8 336 356 0 9 chr5 192877571 192877686 -6752464 + MIR SINE MIR 21 134 -128 252 0 0 0 chr5 192877720 192877748 -6752402 + (A)n Simple_repeat Simple_repeat 1 28 0 4195 92 4 2 chr5 192878811 192879364 -6750786 - MER41A LTR ERV1 0 554 1 22 0 0 0 chr5 192879388 192879410 -6750740 + AT_rich Low_complexity Low_complexity 1 22 0 6159 208 38 32 chr5 192879521 192880635 -6749515 - L1 LINE L1 -941 5205 4075 2310 81 0 24 chr5 192880635 192880933 -6749217 + AluY SINE Alu 1 291 -20 6159 208 38 32 chr5 192880933 192881483 -6748667 - L1 LINE L1 -2071 4075 3530 828 191 32 45 chr5 192881615 192881835 -6748315 + L1MB8 LINE L1 5888 6104 -74 514 248 73 46 chr5 192881856 192881966 -6748184 + L2 LINE L2 3090 3196 -117 2360 103 3 6 chr5 192881966 192882278 -6747872 + AluSp SINE Alu 1 311 -2 514 248 73 46 chr5 192882278 192882385 -6747765 + L2 LINE L2 3196 3313 0 1109 136 6 18 chr5 192882387 192882556 -6747594 - AluJb SINE Alu -10 302 136 181 81 27 81 chr5 192882558 192882595 -6747555 - MIR SINE MIR -115 147 113 261 282 73 18 chr5 192882873 192882983 -6747167 + MIR SINE MIR 84 199 -63 546 235 108 56 chr5 192883492 192883705 -6746445 + Charlie8 DNA MER1_type 52 275 -2142 294 319 35 0 chr5 192883813 192883929 -6746221 - MIR SINE MIR -70 192 73 185 318 191 0 chr5 192884040 192884166 -6745984 + MIR SINE MIR 24 173 -89 267 224 132 92 chr5 192884551 192884703 -6745447 - MER104 DNA Tc2 -12 168 11 1709 151 44 0 chr5 192884931 192885241 -6744909 - AluJb SINE Alu 0 322 1 376 177 54 54 chr5 192885243 192885373 -6744777 - MER113 DNA MER1_type? -391 130 1 199 244 85 148 chr5 192885388 192885426 -6744724 + MIR SINE MIR 28 67 -195 2153 44 0 4 chr5 192885426 192885674 -6744476 + AluY SINE Alu 1 247 -64 199 244 85 148 chr5 192885674 192885811 -6744339 + MIR SINE MIR 67 192 -70 1721 104 12 4 chr5 192886518 192886767 -6743383 - AluSp SINE Alu -14 299 49 565 322 17 60 chr5 192886767 192887065 -6743085 + L2 LINE L2 2987 3271 -1 478 296 46 15 chr5 192887508 192887704 -6742446 - L1ME3A LINE L1 -7 6163 5962 1217 204 84 89 chr5 192887905 192888336 -6741814 - L1MC5 LINE L1 -820 7141 6709 1803 126 61 38 chr5 192888336 192888629 -6741521 + AluSx SINE Alu 1 300 -12 1217 204 84 89 chr5 192888629 192888707 -6741443 - L1MC5 LINE L1 -1252 6709 6632 324 0 0 0 chr5 192888707 192888743 -6741407 + (TG)n Simple_repeat Simple_repeat 2 37 0 1217 204 84 89 chr5 192888743 192888886 -6741264 - L1MC5 LINE L1 -1329 6632 6476 240 298 28 72 chr5 192889543 192889724 -6740426 - HAL1b LINE L1 -812 536 364 21 0 0 0 chr5 192890665 192890686 -6739464 + AT_rich Low_complexity Low_complexity 1 21 0 400 242 172 6 chr5 192891017 192891174 -6738976 + MIR SINE MIR 31 213 -49 30 27 0 0 chr5 192891755 192891792 -6738358 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 192891879 192891900 -6738250 + AT_rich Low_complexity Low_complexity 1 21 0 333 168 179 0 chr5 192892234 192892329 -6737821 - L1ME4a LINE L1 -36 6085 5974 210 300 193 13 chr5 192892485 192892635 -6737515 - MIR SINE MIR -15 247 71 392 258 102 83 chr5 192894734 192895532 -6734618 + HSREP522 Satellite telomeric 1 812 -15 328 305 76 63 chr5 192896616 192896839 -6733311 - L1MDb LINE L1 -5778 631 406 887 324 74 27 chr5 192897196 192897640 -6732510 - L1MDb LINE L1 -5844 565 101 24 0 0 0 chr5 192897764 192897788 -6732362 + AT_rich Low_complexity Low_complexity 1 24 0 2137 128 0 0 chr5 192898157 192898469 -6731681 - AluSx SINE Alu 0 312 1 900 176 6 6 chr5 192898471 192898630 -6731520 - FRAM SINE Alu -17 159 1 3535 222 28 26 chr5 192899796 192900398 -6729752 + L1MB3 LINE L1 3257 3856 -2290 2235 99 10 3 chr5 192900398 192900690 -6729460 + AluSx SINE Alu 1 294 -18 3535 222 28 26 chr5 192900690 192901086 -6729064 + L1MB3 LINE L1 3856 4260 -1886 186 43 0 0 chr5 192901086 192901109 -6729041 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3535 222 28 26 chr5 192901109 192901121 -6729029 + L1MB3 LINE L1 4260 4270 -1876 4080 147 7 30 chr5 192901122 192901151 -6728999 + L1MB3 LINE L1 5400 5428 -755 1991 154 3 3 chr5 192901151 192901457 -6728693 + AluJb SINE Alu 1 306 -6 4080 147 7 30 chr5 192901457 192902149 -6728001 + L1MB3 LINE L1 5428 6104 -79 2693 130 46 68 chr5 192902149 192902666 -6727484 + MER4B LTR ERV1 1 506 -104 3670 163 164 51 chr5 192902669 192903586 -6726564 + LTR28 LTR ERV1 1 1020 0 511 138 172 0 chr5 192903586 192903673 -6726477 + MER4A LTR ERV1 563 664 0 516 105 0 0 chr5 192903673 192903749 -6726401 + L1MB2 LINE L1 6089 6164 -7 385 317 18 18 chr5 192903889 192904056 -6726094 + L1ME4a LINE L1 5652 5818 -303 328 204 152 30 chr5 192904130 192904262 -6725888 + L1ME4a LINE L1 5962 6109 -12 4104 185 49 40 chr5 192904272 192905328 -6724822 + L1MB3 LINE L1 4256 5301 -882 1942 98 10 23 chr5 192905328 192905633 -6724517 + AluSx SINE Alu 1 301 -11 2060 109 6 29 chr5 192905635 192905947 -6724203 + AluSq SINE Alu 1 305 -8 4104 185 49 40 chr5 192905947 192906251 -6723899 + L1MB3 LINE L1 5301 5601 -582 2100 113 7 3 chr5 192906251 192906551 -6723599 - AluSx SINE Alu -11 301 1 4104 185 49 40 chr5 192906551 192907054 -6723096 + L1MB3 LINE L1 5601 6148 -35 1649 251 47 49 chr5 192907089 192907602 -6722548 - MER21B LTR ERV1 -60 803 292 2219 217 37 22 chr5 192907612 192908101 -6722049 - LTR31 LTR ERV1 -15 604 109 568 223 211 0 chr5 192908229 192908395 -6721755 - MER21B LTR ERV1 -568 295 95 436 193 12 12 chr5 192908486 192908569 -6721581 - MER21B LTR ERV1 -769 94 12 3444 119 15 34 chr5 192909376 192909970 -6720180 - LTR10C LTR ERV1 0 529 1 540 75 0 0 chr5 192911570 192911637 -6718513 + AluS SINE Alu 2 68 -245 764 176 6 36 chr5 192911796 192911961 -6718189 + AluSg/x SINE Alu 131 290 -19 206 118 0 0 chr5 192912014 192912048 -6718102 + (T)n Simple_repeat Simple_repeat 1 34 0 338 218 82 45 chr5 192912329 192912439 -6717711 - MLT1J2 LTR MaLR -300 150 37 983 183 0 86 chr5 192913345 192913512 -6716638 + L1ME LINE L1 5045 5180 -966 1395 109 48 13 chr5 192913512 192913742 -6716408 + L1MA5A LINE L1 6060 6297 0 983 183 0 86 chr5 192913742 192913853 -6716297 + L1ME LINE L1 5180 5299 -847 861 203 95 51 chr5 192913859 192913928 -6716222 + L1M4 LINE L1 3689 3753 -2393 2038 101 0 49 chr5 192913928 192914254 -6715896 + AluSq SINE Alu 1 310 -3 861 203 95 51 chr5 192914254 192914499 -6715651 + L1M4 LINE L1 3753 4017 -2129 279 0 0 0 chr5 192914499 192914530 -6715620 + (A)n Simple_repeat Simple_repeat 1 31 0 1148 184 0 14 chr5 192914544 192914756 -6715394 - AluJb SINE Alu -19 293 85 1299 172 11 21 chr5 192914762 192915041 -6715109 - AluSx SINE Alu 0 312 37 193 327 0 0 chr5 192915926 192915981 -6714169 - L3 LINE CR1 -98 1479 1425 462 347 23 11 chr5 192916066 192916242 -6713908 - L3 LINE CR1 -79 1498 1321 2124 120 0 0 chr5 192916543 192916844 -6713306 - AluSg SINE Alu -9 301 1 933 125 0 21 chr5 192916847 192916991 -6713159 - AluSg SINE Alu -169 141 1 1899 220 32 18 chr5 192917212 192917740 -6712410 + Tigger7 DNA MER2_type 3 2486 -1 1131 138 0 0 chr5 192918029 192918203 -6711947 - AluSg/x SINE Alu -19 293 120 253 266 16 0 chr5 192920396 192920460 -6709690 + L1ME LINE L1 5495 5559 -603 1567 156 10 17 chr5 192924122 192924435 -6705715 - AluSx SINE Alu 0 311 1 1838 113 58 10 chr5 192926243 192926534 -6703616 + AluSc SINE Alu 1 305 -4 27327 66 5 1 chr5 192926703 192930202 -6699948 + L1P LINE L1 2 3515 -2631 401 277 69 23 chr5 192930962 192931092 -6699058 + MIR SINE MIR 112 247 -15 367 285 182 19 chr5 192931653 192931875 -6698275 + MIR SINE MIR 1 262 0 466 259 209 34 chr5 192932351 192932614 -6697536 + L3 LINE CR1 306 614 -963 214 314 57 0 chr5 192932817 192932887 -6697263 - MIR SINE MIR -118 144 71 254 240 67 13 chr5 192933116 192933191 -6696959 - L2 LINE L2 -1 3271 3193 355 264 100 81 chr5 192933230 192933622 -6696528 + L2 LINE L2 2689 3313 0 186 108 216 0 chr5 192933923 192933960 -6696190 - MER5B DNA MER1_type -131 47 3 207 279 135 33 chr5 192934010 192934225 -6695925 - L2 LINE L2 -188 3084 2848 2077 93 33 3 chr5 192934329 192934629 -6695521 - AluSx SINE Alu -2 310 2 183 407 0 25 chr5 192934887 192935005 -6695145 + MIR SINE MIR 18 132 -130 349 239 231 0 chr5 192935305 192935384 -6694766 - MER5A DNA MER1_type 0 189 130 1922 98 7 46 chr5 192935384 192935691 -6694459 - AluSq SINE Alu -5 308 14 349 239 231 0 chr5 192935691 192935741 -6694409 - MER5A DNA MER1_type -59 130 30 692 251 57 40 chr5 192935751 192936013 -6694137 + MIR SINE MIR 2 262 0 189 247 13 13 chr5 192936021 192936098 -6694052 - L2 LINE L2 -678 2636 2560 340 264 163 8 chr5 192936898 192937027 -6693123 - MIR SINE MIR -15 247 99 1183 203 19 16 chr5 192937234 192937490 -6692660 + MIR SINE MIR 5 261 -1 229 316 79 79 chr5 192937628 192937856 -6692294 - L2 LINE L2 -51 3221 2994 207 319 167 14 chr5 192937946 192938090 -6692060 - L2 LINE L2 -1 3312 3147 918 280 69 16 chr5 192938100 192938404 -6691746 - MLT1K LTR MaLR -1 587 268 405 296 15 30 chr5 192938660 192938795 -6691355 + MIR SINE MIR 18 150 -112 230 242 110 22 chr5 192938956 192939047 -6691103 + MIR SINE MIR 23 121 -141 324 361 56 7 chr5 192939589 192939733 -6690417 - MIR3 SINE MIR -28 180 30 245 289 48 36 chr5 192939777 192939860 -6690290 - L2 LINE L2 -22 3250 3167 317 345 6 29 chr5 192939876 192940050 -6690100 + (TCCA)n Simple_repeat Simple_repeat 3 172 0 273 317 161 42 chr5 192940055 192940972 -6689178 - L2 LINE L2 0 3272 2246 472 254 0 0 chr5 192941133 192941255 -6688895 + L1MD3 LINE L1 7854 7975 -20 661 256 35 83 chr5 192941320 192941609 -6688541 - L1ME1 LINE L1 -1 6234 5960 1560 166 36 22 chr5 192941627 192941708 -6688442 - L1MA4 LINE L1 -7 6164 6086 2076 106 0 10 chr5 192941708 192942000 -6688150 + AluSx SINE Alu 1 289 -23 1560 166 36 22 chr5 192942000 192942283 -6687867 - L1MA4 LINE L1 -85 6086 5787 723 141 0 16 chr5 192942282 192942410 -6687740 - L1MA4 LINE L1 -1887 4259 4134 * 2994 204 72 34 chr5 192942410 192943590 -6686560 - L1ME1 LINE L1 -260 5975 4739 435 38 0 0 chr5 192943590 192943643 -6686507 + (TG)n Simple_repeat Simple_repeat 1 53 0 2994 204 72 34 chr5 192943643 192943788 -6686362 - L1ME1 LINE L1 -1496 4739 4601 2302 121 14 29 chr5 192943796 192943844 -6686306 - L1MA4A LINE L1 -11 6292 6245 1973 190 133 115 chr5 192943844 192944655 -6685495 + LTR1B LTR ERV1 1 826 0 2302 121 14 29 chr5 192944655 192945021 -6685129 - L1MA4A LINE L1 -58 6245 5884 3048 149 43 20 chr5 192945416 192946205 -6683945 - L1MA4A LINE L1 -700 5603 4808 3838 265 60 25 chr5 192946235 192947747 -6682403 - L1ME1 LINE L1 -4797 1599 34 586 250 23 0 chr5 192947860 192947992 -6682158 - MIR SINE MIR -79 183 49 460 319 75 0 chr5 192948903 192949063 -6681087 - MIR SINE MIR -1 261 90 505 291 15 0 chr5 192949400 192949534 -6680616 + MLT1K LTR MaLR 129 264 -324 268 308 84 44 chr5 192949760 192950010 -6680140 + MLT1K LTR MaLR 126 385 -203 1912 109 18 3 chr5 192950051 192950335 -6679815 - AluSx SINE Alu -24 288 1 2207 110 0 0 chr5 192950344 192950645 -6679505 - AluSx SINE Alu -11 301 1 28 0 0 0 chr5 192950915 192950943 -6679207 + AT_rich Low_complexity Low_complexity 1 28 0 341 87 0 0 chr5 192950978 192951024 -6679126 + MADE1 DNA Mariner 1 46 -34 386 120 0 0 chr5 192951091 192951141 -6679009 + Alu SINE Alu 2 51 -251 376 94 0 0 chr5 192951141 192951194 -6678956 + MADE1 DNA Mariner 28 80 0 801 177 144 71 chr5 192951282 192951305 -6678845 - L1MC5 LINE L1 -241 7720 7700 1755 149 10 20 chr5 192951305 192951606 -6678544 + AluJb SINE Alu 1 298 -14 801 177 144 71 chr5 192951606 192951691 -6678459 - L1MC5 LINE L1 -261 7700 7623 1829 139 27 7 chr5 192951691 192951985 -6678165 - AluSx SINE Alu -11 301 2 801 177 144 71 chr5 192951985 192952214 -6677936 - L1MC5 LINE L1 -338 7623 7357 1911 234 64 16 chr5 192952224 192952846 -6677304 - L1ME1 LINE L1 -4 6231 5526 525 101 13 0 chr5 192952846 192952925 -6677225 - MADE1 DNA Mariner 0 80 1 1911 234 64 16 chr5 192952925 192952941 -6677209 - L1ME1 LINE L1 -709 5526 5512 3756 243 61 32 chr5 192952956 192953093 -6677057 - L1ME1 LINE L1 -1470 4745 4613 2052 66 77 3 chr5 192953093 192953379 -6676771 + AluSq SINE Alu 1 307 -6 3756 243 61 32 chr5 192953379 192954729 -6675421 - L1ME1 LINE L1 -1602 4613 3215 1306 122 0 0 chr5 192954844 192955016 -6675134 - AluSx SINE Alu -140 172 1 3850 232 35 42 chr5 192955018 192955100 -6675050 - L1ME1 LINE L1 -3029 3186 3105 1441 167 107 21 chr5 192955100 192955381 -6674769 - AluJb SINE Alu -6 306 2 3850 232 35 42 chr5 192955381 192956381 -6673769 - L1ME1 LINE L1 -3110 3105 2100 1048 88 0 19 chr5 192956381 192956541 -6673609 - L1MA5A LINE L1 0 6297 6141 3850 232 35 42 chr5 192956541 192956567 -6673583 - L1ME1 LINE L1 -4115 2100 2075 1999 153 0 10 chr5 192956567 192956875 -6673275 - AluSx SINE Alu -7 305 1 3850 232 35 42 chr5 192956875 192957820 -6672330 - L1ME1 LINE L1 -4140 2075 1190 * 5407 176 55 50 chr5 192957814 192960319 -6669831 - L1MC2 LINE L1 0 6344 3832 1601 248 66 8 chr5 192961436 192961919 -6668231 - L1MC2 LINE L1 -2305 3841 3331 * 2296 218 80 63 chr5 192961898 192962148 -6668002 - L1ME1 LINE L1 -5192 1204 960 1956 157 7 0 chr5 192962148 192962442 -6667708 - AluSx SINE Alu -16 296 1 2296 218 80 63 chr5 192962442 192962914 -6667236 - L1ME1 LINE L1 -5436 960 462 1122 151 0 6 chr5 192962914 192963086 -6667064 - FAM SINE Alu -4 171 1 2296 218 80 63 chr5 192963086 192963234 -6666916 - L1ME1 LINE L1 -5934 462 318 656 278 30 20 chr5 192963463 192963661 -6666489 - L1ME1 LINE L1 -6088 308 109 233 127 55 0 chr5 192963662 192963717 -6666433 + (TA)n Simple_repeat Simple_repeat 1 58 0 2134 119 0 3 chr5 192963717 192964003 -6666147 - AluSx SINE Alu -27 285 1 316 256 24 40 chr5 192964003 192964128 -6666022 - L1ME1 LINE L1 -6271 125 3 * 333 270 141 54 chr5 192964101 192964189 -6665961 - L1MC4 LINE L1 0 8111 8032 237 33 0 0 chr5 192964189 192964219 -6665931 + (TG)n Simple_repeat Simple_repeat 1 30 0 333 270 141 54 chr5 192964219 192964371 -6665779 - L1MC4 LINE L1 -79 8032 7850 984 257 40 16 chr5 192964405 192964701 -6665449 - MLT1F1 LTR MaLR 0 567 280 306 0 0 0 chr5 192964701 192964735 -6665415 + (TG)n Simple_repeat Simple_repeat 1 34 0 192 40 0 0 chr5 192964738 192964763 -6665387 + (GA)n Simple_repeat Simple_repeat 1 25 0 984 257 40 16 chr5 192964763 192964938 -6665212 - MLT1F1 LTR MaLR -288 279 1 260 202 195 36 chr5 192964959 192965069 -6665081 - L1MC4a LINE L1 -226 7582 7521 * 468 225 98 35 chr5 192965039 192965270 -6664880 - L1MC4 LINE L1 -449 7593 7243 947 213 62 4 chr5 192965307 192965547 -6664603 - HAL1 LINE L1 -2129 378 125 357 229 25 38 chr5 192966355 192966512 -6663638 + C-rich Low_complexity Low_complexity 2 156 0 1777 141 30 34 chr5 192966906 192967204 -6662946 + AluJo SINE Alu 1 297 -15 1860 154 26 7 chr5 192967782 192968158 -6661992 - AluSx SINE Alu 0 382 1 2083 108 0 10 chr5 192968255 192968583 -6661567 + AluSp SINE Alu 1 325 0 271 118 0 98 chr5 192968595 192968646 -6661504 + L1ME4a LINE L1 5976 6021 -100 1047 173 0 0 chr5 192968662 192968824 -6661326 - AluSg/x SINE Alu -22 290 129 5166 164 40 4 chr5 192968960 192970084 -6660066 - L1PB2 LINE L1 -2 6149 4996 1686 250 62 4 chr5 192970088 192970185 -6659965 + L1P LINE L1 2209 2299 -3847 1742 164 48 3 chr5 192970185 192970477 -6659673 - AluJb SINE Alu -7 305 1 1686 250 62 4 chr5 192970477 192970907 -6659243 + L1P LINE L1 2299 2767 -3379 2433 63 6 32 chr5 192970911 192971226 -6658924 + AluY SINE Alu 1 307 -4 703 178 111 152 chr5 192971229 192971544 -6658606 - MLT1A1 LTR MaLR -63 302 1 2848 214 36 41 chr5 192971551 192971886 -6658264 - L1MEc LINE L1 -3260 3697 3362 2245 97 0 16 chr5 192971886 192972197 -6657953 + AluY SINE Alu 1 306 -5 2848 214 36 41 chr5 192972197 192972382 -6657768 - L1MEc LINE L1 -3595 3362 3178 2014 118 3 7 chr5 192972382 192972706 -6657444 - AluSx SINE Alu 0 323 1 2848 214 36 41 chr5 192972706 192973121 -6657029 - L1MEc LINE L1 -3779 3178 2799 1329 219 11 4 chr5 192973120 192973385 -6656765 - L1MEc LINE L1 -6485 374 108 * 1627 126 3 120 chr5 192973385 192973742 -6656408 - AluSg SINE Alu 0 320 1 200 200 0 0 chr5 192974006 192974041 -6656109 + (TG)n Simple_repeat Simple_repeat 2 36 0 1088 259 51 12 chr5 192974624 192974960 -6655190 - L1ME3 LINE L1 -191 5971 5623 1440 199 28 84 chr5 192974976 192975175 -6654975 - MLT1A2 LTR MaLR -4 370 202 4550 173 18 56 chr5 192975175 192975215 -6654935 - MER54A LTR ERVL 0 901 861 2126 133 10 0 chr5 192975215 192975515 -6654635 - AluSx SINE Alu -9 303 1 4550 173 18 56 chr5 192975515 192976410 -6653740 - MER54A LTR ERVL -40 861 1 1440 199 28 84 chr5 192976410 192976602 -6653548 - MLT1A2 LTR MaLR -172 202 1 1364 199 43 0 chr5 192976602 192976879 -6653271 - L1ME3 LINE L1 -550 5614 5326 2222 108 0 0 chr5 192977843 192978138 -6652012 - AluY SINE Alu -16 295 1 1538 152 3 109 chr5 192978790 192979120 -6651030 + AluJo SINE Alu 1 295 -7 2148 136 0 0 chr5 192979149 192979450 -6650700 + AluSx SINE Alu 1 301 -11 695 173 14 0 chr5 192979887 192980026 -6650124 - L1MD2 LINE L1 0 6359 6219 2184 100 0 50 chr5 192980145 192980466 -6649684 + AluSx SINE Alu 1 305 -7 1046 158 12 0 chr5 192980466 192980630 -6649520 + AluSg/x SINE Alu 132 297 -13 872 242 66 15 chr5 192980783 192981056 -6649094 - L1MA9 LINE L1 -30 6282 5996 648 177 78 7 chr5 192981160 192981301 -6648849 - L1MC2 LINE L1 -2 6342 6192 1084 195 176 4 chr5 192981304 192981560 -6648590 + AluJb SINE Alu 1 300 -2 356 229 0 36 chr5 192981566 192981706 -6648444 + GA-rich Low_complexity Low_complexity 2 136 0 396 176 44 11 chr5 192981713 192981804 -6648346 - L1MC1 LINE L1 -131 6202 6109 2203 113 0 13 chr5 192981812 192982122 -6648028 - AluSc SINE Alu 0 309 4 400 276 29 0 chr5 192982146 192982251 -6647899 + L2 LINE L2 2403 2510 -804 2110 116 0 0 chr5 192982931 192983208 -6646942 - AluSx SINE Alu -10 302 26 2341 107 0 10 chr5 192983415 192983725 -6646425 + AluSx SINE Alu 1 307 -5 1425 214 42 68 chr5 192984185 192984290 -6645860 - L1ME3 LINE L1 -811 5335 5229 334 0 43 0 chr5 192984290 192984336 -6645814 + (TA)n Simple_repeat Simple_repeat 1 48 0 1425 214 42 68 chr5 192984336 192984396 -6645754 - L1ME3 LINE L1 -917 5229 5169 2235 95 0 35 chr5 192984396 192984711 -6645439 - AluSq SINE Alu -9 304 1 1425 214 42 68 chr5 192984711 192985043 -6645107 - L1ME3 LINE L1 -977 5169 4850 1551 147 21 98 chr5 192985048 192985374 -6644776 + AluYb8 SINE Alu 1 301 -17 598 264 98 0 chr5 192985385 192985548 -6644602 + L1MEc LINE L1 40 218 -6178 226 245 54 107 chr5 192985753 192986014 -6644136 - L1M4c LINE L1 -6126 258 12 246 224 13 26 chr5 192986582 192986649 -6643501 - L1ME LINE L1 -516 5605 5538 3670 158 97 32 chr5 192986649 192987425 -6642725 - LTR1B LTR ERV1 0 826 1 1117 83 0 0 chr5 192987526 192987659 -6642491 + AluSq/x SINE Alu 1 133 -179 2007 224 50 12 chr5 192987695 192988199 -6641951 - MER74A LTR ERVL -14 544 22 2217 112 3 0 chr5 192988451 192988745 -6641405 + AluSq SINE Alu 1 295 -18 537 260 177 32 chr5 192989196 192989535 -6640615 + MLT1J LTR MaLR 104 491 -20 2314 59 7 46 chr5 192990407 192990713 -6639437 + AluY SINE Alu 1 294 -17 537 70 0 0 chr5 192991097 192991211 -6638939 + AluSc SINE Alu 208 321 0 479 290 52 38 chr5 192991211 192991477 -6638673 - MER34 LTR ERV1 -279 263 5 665 196 68 8 chr5 192991477 192991610 -6638540 - L1MD3 LINE L1 -436 7559 7419 418 192 0 54 chr5 192991614 192991714 -6638436 - MLT1F1 LTR MaLR -380 169 49 702 181 27 27 chr5 192991716 192991865 -6638285 - L1MC3 LINE L1 -672 7113 6965 8730 96 7 54 chr5 192991870 192992905 -6637245 + HSMAR2 DNA Mariner 6 1087 -215 1744 135 66 0 chr5 192992905 192993164 -6636986 - AluSp SINE Alu -37 276 1 8730 96 7 54 chr5 192993164 192993434 -6636716 + HSMAR2 DNA Mariner 1087 1248 -54 2212 125 3 0 chr5 192993434 192993745 -6636405 - AluSp SINE Alu -1 312 1 8730 96 7 54 chr5 192993745 192993797 -6636353 + HSMAR2 DNA Mariner 1248 1301 -1 849 154 26 137 chr5 192993797 192993921 -6636229 - L1MC3 LINE L1 -819 6966 6879 2423 96 0 0 chr5 192993921 192994223 -6635927 - AluSx SINE Alu -10 302 1 849 154 26 137 chr5 192994223 192994332 -6635818 - L1MC3 LINE L1 -906 6879 6759 989 150 0 0 chr5 192994414 192994554 -6635596 + AluSq SINE Alu 125 264 -49 765 179 8 0 chr5 192994567 192994690 -6635460 - FLAM_C SINE Alu -18 125 2 594 111 22 0 chr5 192994696 192994786 -6635364 - L1M4 LINE L1 -1198 4948 4857 1931 143 34 12 chr5 192994793 192995114 -6635036 + L1MC3 LINE L1 6688 7015 -770 5859 235 84 50 chr5 192995117 192995380 -6634770 - L1MEc LINE L1 -3425 2790 2537 2674 133 43 7 chr5 192995380 192995825 -6634325 - MER65C LTR ERV1 0 461 1 5859 235 84 50 chr5 192995825 192996092 -6634058 - L1MEc LINE L1 -3678 2537 2281 2226 109 0 10 chr5 192996092 192996394 -6633756 - AluSx SINE Alu -13 299 1 5859 235 84 50 chr5 192996394 192996842 -6633308 - L1MEc LINE L1 -3934 2281 1850 2142 116 7 10 chr5 192996842 192997135 -6633015 - AluSq SINE Alu -21 292 1 5859 235 84 50 chr5 192997135 192997630 -6632520 - L1MEc LINE L1 -4365 1850 1373 2409 84 7 0 chr5 192997630 192997929 -6632221 - AluSg SINE Alu -9 301 1 5859 235 84 50 chr5 192997929 192999143 -6631007 - L1MEc LINE L1 -4842 1373 37 446 239 37 0 chr5 192999248 192999357 -6630793 - MIR SINE MIR -69 193 81 30 0 0 0 chr5 192999522 192999552 -6630598 + AT_rich Low_complexity Low_complexity 1 30 0 1967 128 31 7 chr5 192999671 192999959 -6630191 - AluSx SINE Alu -17 295 1 373 258 167 0 chr5 193000599 193000719 -6629431 - MIR SINE MIR -12 250 111 822 165 11 62 chr5 193000773 193000949 -6629201 - FRAM SINE Alu 0 40 1 1368 159 85 7 chr5 193000956 193001226 -6628924 - AluJb SINE Alu -7 305 15 2035 127 10 0 chr5 193001502 193001793 -6628357 - AluSx SINE Alu -18 294 1 293 109 146 0 chr5 193001799 193001854 -6628296 - Charlie8 DNA MER1_type -2301 116 54 418 260 189 55 chr5 193002746 193003234 -6626916 - MLT1G1 LTR MaLR 0 595 43 1753 152 15 0 chr5 193003241 193003504 -6626646 + AluJb SINE Alu 25 291 -21 1126 273 120 25 chr5 193003555 193004079 -6626071 - L2 LINE L2 -392 2922 2327 315 0 0 0 chr5 193004079 193004114 -6626036 + (TG)n Simple_repeat Simple_repeat 1 35 0 1126 273 120 25 chr5 193004114 193004220 -6625930 - L2 LINE L2 -987 2327 2232 1517 149 95 3 chr5 193004423 193004797 -6625353 - L1M4 LINE L1 -626 5558 5155 1688 140 0 0 chr5 193004799 193005034 -6625116 + AluSx SINE Alu 1 235 -77 553 130 0 0 chr5 193005034 193005111 -6625039 + AluSg/x SINE Alu 199 275 -37 369 0 0 0 chr5 193005116 193005157 -6624993 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 315 279 156 0 chr5 193005254 193005433 -6624717 - L1M4 LINE L1 -1076 5070 4864 275 89 89 0 chr5 193205480 193205525 -6424625 - MSTC LTR MaLR -379 49 1 919 164 19 120 chr5 193205531 193205896 -6424254 - L1M4 LINE L1 -660 5518 5181 336 85 17 0 chr5 193205898 193205957 -6424193 - L1MA9 LINE L1 0 6312 6253 1102 131 68 0 chr5 193205981 193206172 -6423978 - L1MA9 LINE L1 -257 6055 5852 630 265 119 0 chr5 193206186 193206439 -6423711 - L1MC4 LINE L1 -54 7988 7706 511 253 39 61 chr5 193206437 193206544 -6423606 - L1MC/D LINE L1 -2313 5495 5387 * 2381 102 3 0 chr5 193206544 193206849 -6423301 + AluSx SINE Alu 1 306 -6 511 253 39 61 chr5 193206849 193206970 -6423180 - L1MC/D LINE L1 -2421 5387 5272 2347 94 0 31 chr5 193207030 193207350 -6422800 - AluY SINE Alu -1 310 1 482 243 16 97 chr5 193207374 193207559 -6422591 - L1MC/D LINE L1 -947 5199 5030 931 409 7 36 chr5 193207563 193207869 -6422281 + AluSx SINE Alu 1 297 -5 1711 189 3 21 chr5 193207871 193208162 -6421988 - AluJo SINE Alu -26 286 1 302 341 11 38 chr5 193208163 193208424 -6421726 - L1MC/D LINE L1 -1386 4760 4507 322 111 37 0 chr5 193208495 193208549 -6421601 + MLT1C LTR MaLR 7 62 -405 * 665 161 42 0 chr5 193208533 193208651 -6421499 + MLT1B LTR MaLR 268 390 0 512 293 0 7 chr5 193209107 193209254 -6420896 + MIR SINE MIR 77 222 -40 2345 113 0 0 chr5 193209802 193210112 -6420038 + AluSg SINE Alu 1 310 0 343 224 0 35 chr5 193211014 193211099 -6419051 + MIR SINE MIR 70 151 -111 257 234 40 105 chr5 193211589 193211713 -6418437 + L2 LINE L2 3175 3290 -23 407 270 58 58 chr5 193211802 193211991 -6418159 - MIR SINE MIR -43 219 31 357 196 78 39 chr5 193212306 193212408 -6417742 - MIR3 SINE MIR -21 187 82 302 308 108 0 chr5 193212454 193212574 -6417576 + L1ME4a LINE L1 5989 6121 0 929 230 27 42 chr5 193212603 193212786 -6417364 + MIR SINE MIR 6 185 -77 1631 198 18 9 chr5 193212786 193213124 -6417026 + MER58B DNA MER1_type 1 341 0 929 230 27 42 chr5 193213124 193213201 -6416949 + MIR SINE MIR 185 262 0 443 215 107 20 chr5 193213270 193213419 -6416731 + MER104 DNA Tc2 4 165 -15 211 133 56 35 chr5 193213716 193213786 -6416364 + MIR SINE MIR 84 121 -87 338 258 52 13 chr5 193213929 193214084 -6416066 + L2 LINE L2 2743 2903 -411 285 98 0 0 chr5 193214849 193214890 -6415260 + (TTTTC)n Simple_repeat Simple_repeat 5 45 0 2108 142 3 0 chr5 193214898 193215201 -6414949 - AluJb SINE Alu -8 304 1 1905 126 142 26 chr5 193215360 193215399 -6414751 - MSTA LTR MaLR -2 426 393 2181 127 0 3 chr5 193215399 193215698 -6414452 + AluSg1 SINE Alu 1 298 -11 1905 126 142 26 chr5 193215698 193215897 -6414253 - MSTA LTR MaLR -35 393 218 2065 120 0 0 chr5 193215897 193216180 -6413970 - AluSx SINE Alu -13 299 17 1905 126 142 26 chr5 193216180 193216320 -6413830 - MSTA LTR MaLR -210 218 3 2070 211 27 69 chr5 193216756 193216883 -6413267 - L1MB7 LINE L1 0 6184 6053 1555 215 0 10 chr5 193216883 193217176 -6412974 + AluJo SINE Alu 1 290 -22 2180 128 0 3 chr5 193217186 193217491 -6412659 + AluSg SINE Alu 1 304 -6 2070 211 27 69 chr5 193217491 193217973 -6412177 - L1MB7 LINE L1 -140 6044 5590 1867 81 0 4 chr5 193219658 193219892 -6410258 - AluSg/x SINE Alu -12 300 68 306 215 99 25 chr5 193219965 193220086 -6410064 - HAL1b LINE L1 -28 1320 1191 186 147 0 0 chr5 193221155 193221189 -6408961 - MIR SINE MIR -115 147 114 345 47 0 0 chr5 193222135 193222178 -6407972 + (TTCA)n Simple_repeat Simple_repeat 4 46 0 235 242 54 81 chr5 193222504 193222601 -6407549 + MIR SINE MIR 9 98 -114 2410 91 0 0 chr5 193222601 193222899 -6407251 - AluSc SINE Alu -11 298 1 235 242 54 81 chr5 193222899 193222944 -6407206 + MIR SINE MIR 98 143 -69 224 294 76 0 chr5 193223142 193223234 -6406916 + MIR SINE MIR 46 144 -64 301 262 24 36 chr5 193223733 193223817 -6406333 + MIR3 SINE MIR 73 155 -53 2253 89 41 3 chr5 193225528 193225820 -6404330 - AluSc SINE Alu -6 303 1 202 222 14 83 chr5 193227064 193227136 -6403014 + MIR SINE MIR 84 150 -58 202 159 0 45 chr5 193227200 193227244 -6402906 + G-rich Low_complexity Low_complexity 6 47 0 212 0 36 0 chr5 193228497 193228525 -6401625 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 2320 102 3 3 chr5 193228549 193228853 -6401297 + AluSq SINE Alu 1 304 -9 398 232 42 0 chr5 193228864 193228959 -6401191 + MIR SINE MIR 161 259 -3 1180 260 20 14 chr5 193229014 193229360 -6400790 + L2 LINE L2 2235 2582 -732 535 146 0 0 chr5 193229365 193229447 -6400703 + AluJ/FLAM SINE Alu 6 87 -225 422 242 57 0 chr5 193229450 193229574 -6400576 + L2 LINE L2 2572 2702 -612 675 275 73 28 chr5 193229595 193229657 -6400493 - L1MEc LINE L1 -4705 1691 1633 2214 107 7 3 chr5 193229657 193229955 -6400195 - AluSx SINE Alu -13 299 1 675 275 73 28 chr5 193229955 193230288 -6399862 - L1MEc LINE L1 -4763 1633 1278 269 153 0 34 chr5 193230912 193230971 -6399179 + CT-rich Low_complexity Low_complexity 2 58 0 2199 132 3 0 chr5 193230989 193231299 -6398851 - AluSp SINE Alu -2 311 1 665 236 85 8 chr5 193231481 193231740 -6398410 + L2 LINE L2 2686 2964 -350 208 217 0 22 chr5 193231753 193231799 -6398351 + MIR SINE MIR 207 251 -11 361 266 78 16 chr5 193232495 193232623 -6397527 + L2 LINE L2 3136 3271 -1 380 245 0 29 chr5 193233540 193233642 -6396508 + MIR SINE MIR 38 136 -72 2223 156 11 64 chr5 193233757 193233909 -6396241 + MSTB LTR MaLR 1 160 -266 2399 93 0 7 chr5 193233909 193234210 -6395940 - AluSx SINE Alu -13 299 1 2223 156 11 64 chr5 193234210 193234249 -6395901 + MSTB LTR MaLR 160 200 -226 2096 148 0 0 chr5 193234249 193234554 -6395596 - AluSx SINE Alu -4 308 4 2223 156 11 64 chr5 193234554 193234811 -6395339 + MSTB LTR MaLR 200 426 0 872 234 179 40 chr5 193235168 193235476 -6394674 + MLT1J LTR MaLR 5 367 -144 1666 258 58 26 chr5 193235476 193235979 -6394171 + LTR40a LTR ERVL 1 519 0 872 234 179 40 chr5 193235979 193236016 -6394134 + MLT1J LTR MaLR 367 398 -113 674 264 62 34 chr5 193236128 193236420 -6393730 - L1ME2 LINE L1 -52 6112 5813 6015 156 30 8 chr5 193236427 193237552 -6392598 - L1MC1 LINE L1 0 6333 5186 347 244 24 41 chr5 193237644 193237767 -6392383 + L2 LINE L2 2704 2824 -490 * 652 259 132 0 chr5 193237765 193237977 -6392173 + MIR SINE MIR 7 246 -16 219 305 61 0 chr5 193238023 193238105 -6392045 + L2 LINE L2 2878 2964 -308 311 247 6 0 chr5 193238122 193238280 -6391870 + (CA)n Simple_repeat Simple_repeat 2 160 0 494 231 15 15 chr5 193238598 193238732 -6391418 + L2 LINE L2 3139 3272 0 648 132 5 58 chr5 193239256 193239445 -6390705 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2333 128 0 0 chr5 193239445 193239811 -6390339 - AluSx SINE Alu 0 366 1 968 139 0 0 chr5 193240751 193240895 -6389255 + AluSg/x SINE Alu 169 312 0 389 231 58 0 chr5 193240914 193241018 -6389132 - MER81 DNA DNA -2 112 3 468 303 69 11 chr5 193241076 193241264 -6388886 - MIR SINE MIR -58 204 6 1715 166 4 0 chr5 193241404 193241681 -6388469 - AluJb SINE Alu -34 278 1 202 237 0 51 chr5 193242201 193242260 -6387890 - MIR SINE MIR -66 196 141 1252 232 56 98 chr5 193242586 193243138 -6387012 + L1MC5 LINE L1 7048 7576 -385 183 273 121 0 chr5 193243806 193243872 -6386278 - MIR SINE MIR -60 148 75 647 242 26 11 chr5 193244092 193244282 -6385868 + MER105 DNA DNA 1 193 -11 396 321 57 0 chr5 193244295 193244504 -6385646 - L1MC4a LINE L1 -1909 5899 5679 602 303 136 6 chr5 193244722 193244943 -6385207 - MIR SINE MIR -6 256 9 242 362 38 0 chr5 193244988 193245093 -6385057 + MER91C DNA MER1_type 30 138 -2 2467 76 20 0 chr5 193245224 193245525 -6384625 + AluY SINE Alu 1 307 -4 210 256 35 116 chr5 193245630 193245888 -6384262 - L2 LINE L2 -218 3054 2818 2278 103 0 3 chr5 193246572 193246863 -6383287 + AluY SINE Alu 1 290 -21 325 271 57 16 chr5 193246866 193246988 -6383162 - L2 LINE L2 -556 2758 2632 1165 174 0 71 chr5 193247152 193247376 -6382774 - AluJo SINE Alu -104 208 1 2277 111 0 3 chr5 193247478 193247775 -6382375 - AluSx SINE Alu -16 296 1 26 64 0 0 chr5 193247894 193247941 -6382209 + AT_rich Low_complexity Low_complexity 1 47 0 599 245 88 0 chr5 193248032 193248191 -6381959 + MIR SINE MIR 61 233 -29 414 94 0 0 chr5 193248264 193248328 -6381822 + Alu SINE Alu 236 299 -11 805 266 14 86 chr5 193248339 193248701 -6381449 - L2 LINE L2 -20 3252 2919 291 255 151 0 chr5 193248942 193249048 -6381102 + MIR SINE MIR 124 245 -17 289 207 35 43 chr5 193249458 193249574 -6380576 + (CGTG)n Simple_repeat Simple_repeat 3 117 0 359 134 30 0 chr5 193249574 193249641 -6380509 + CT-rich Low_complexity Low_complexity 4 72 0 295 247 141 0 chr5 193249656 193249741 -6380409 + L2 LINE L2 3204 3300 -13 2636 149 20 22 chr5 193250315 193250857 -6379293 - L1MB8 LINE L1 0 6178 5638 2420 100 0 0 chr5 193250881 193251180 -6378970 - AluSx SINE Alu -13 299 1 192 77 0 0 chr5 193251193 193251219 -6378931 + (A)n Simple_repeat Simple_repeat 1 26 0 203 239 22 0 chr5 193251319 193251365 -6378785 + L2 LINE L2 3223 3269 -3 2476 95 0 0 chr5 193251839 193252144 -6378006 - AluSx SINE Alu -7 305 1 2458 70 0 3 chr5 193252308 193252607 -6377543 + AluY SINE Alu 5 302 -9 2152 110 7 0 chr5 193252694 193252999 -6377151 - AluSx SINE Alu 0 307 1 581 210 25 13 chr5 193253429 193253586 -6376564 - L1ME4a LINE L1 0 6121 5963 282 250 70 20 chr5 193254325 193254425 -6375725 - MIR SINE MIR -77 185 81 360 152 0 0 chr5 193254744 193254810 -6375340 + (TG)n Simple_repeat Simple_repeat 1 66 0 589 256 130 24 chr5 193254831 193255038 -6375112 + MIR SINE MIR 13 241 -21 296 238 238 28 chr5 193255293 193255579 -6374571 + L2 LINE L2 2363 2708 -606 307 188 16 0 chr5 193255759 193255823 -6374327 + L2 LINE L2 3001 3065 -248 476 177 0 9 chr5 193255829 193255942 -6374208 + (CA)n Simple_repeat Simple_repeat 1 112 0 190 256 0 0 chr5 193255961 193256000 -6374150 - L2 LINE L2 -98 3215 3177 2200 94 3 11 chr5 193256100 193256408 -6373742 + AluSq SINE Alu 1 306 0 231 36 0 0 chr5 193256446 193256474 -6373676 + (CA)n Simple_repeat Simple_repeat 1 28 0 314 138 17 0 chr5 193256637 193256695 -6373455 + GA-rich Low_complexity Low_complexity 4 62 0 199 346 40 0 chr5 193258797 193258898 -6371252 + MIR3 SINE MIR 58 162 -46 955 189 16 0 chr5 193258994 193259179 -6370971 + MER5A DNA MER1_type 1 188 -1 228 344 11 0 chr5 193259198 193259288 -6370862 + L2 LINE L2 2716 2806 -508 429 302 78 17 chr5 193259469 193259648 -6370502 + MIR SINE MIR 51 240 -22 455 220 158 29 chr5 193259662 193259729 -6370421 - MER46C DNA MER2_type -2 336 279 2441 165 18 23 chr5 193259729 193260165 -6369985 - Tigger2a DNA MER2_type 0 434 1 455 220 158 29 chr5 193260165 193260306 -6369844 - MER46C DNA MER2_type -59 279 101 254 372 0 0 chr5 193260309 193260403 -6369747 - L2 LINE L2 -527 2787 2694 * 255 202 21 96 chr5 193260396 193260490 -6369660 + MER5A DNA MER1_type 12 98 -91 269 313 0 42 chr5 193260512 193260608 -6369542 - MIR SINE MIR -56 152 61 341 171 110 24 chr5 193260612 193260694 -6369456 - MER46C DNA MER2_type -247 91 3 333 286 159 8 chr5 193260733 193260859 -6369291 + MIR SINE MIR 9 153 -55 394 260 187 0 chr5 193261455 193261578 -6368572 + MIR SINE MIR 52 197 -65 577 272 34 0 chr5 193261866 193262013 -6368137 + MIR SINE MIR 8 159 -103 * 1174 268 142 12 chr5 193262000 193262544 -6367606 + L2 LINE L2 2414 3091 -222 2052 97 4 0 chr5 193262544 193262802 -6367348 - AluSp SINE Alu -19 294 36 1174 268 142 12 chr5 193262802 193263059 -6367091 + L2 LINE L2 3091 3313 0 281 235 94 0 chr5 193263056 193263141 -6367009 + MIR SINE MIR 151 243 -19 * 210 125 25 0 chr5 193263687 193263727 -6366423 + L3 LINE CR1 1424 1464 -113 487 319 110 19 chr5 193263908 193264218 -6365932 - L2 LINE L2 -54 3259 2922 620 312 81 18 chr5 193264502 193264787 -6365363 - L2 LINE L2 -5 3308 3006 416 123 98 0 chr5 193264905 193265027 -6365123 + FRAM SINE Alu 1 40 0 225 283 50 0 chr5 193265227 193265287 -6364863 - MIR SINE MIR -118 144 82 1961 113 3 23 chr5 193265512 193265813 -6364337 + AluSq SINE Alu 1 295 -18 260 283 0 22 chr5 193265878 193265970 -6364180 + L2 LINE L2 3183 3272 0 193 61 61 30 chr5 193266060 193266093 -6364057 + MIR SINE MIR 117 150 -112 238 226 67 14 chr5 193266621 193266724 -6363426 + MIR SINE MIR 88 194 -14 846 263 190 6 chr5 193267689 193268020 -6362130 + L2 LINE L2 2027 2418 -896 2341 122 0 0 chr5 193268097 193268408 -6361742 - AluSq SINE Alu 0 313 3 1322 83 24 0 chr5 193269438 193269607 -6360543 - AluSq SINE Alu -140 173 1 548 296 45 20 chr5 193269858 193270057 -6360093 - L2 LINE L2 -234 3079 2876 2293 105 0 3 chr5 193270130 193270426 -6359724 + AluSg SINE Alu 1 295 -15 953 139 58 29 chr5 193270426 193270599 -6359551 + AluSg/x SINE Alu 134 311 -1 650 164 96 0 chr5 193270599 193270703 -6359447 - AluJo/FLAM SINE Alu -196 116 3 1128 181 0 34 chr5 193271257 193271462 -6358688 - AluJo SINE Alu -45 267 70 576 172 25 8 chr5 193271471 193271593 -6358557 - AluSc SINE Alu -11 298 175 420 331 119 27 chr5 193271769 193272180 -6357970 + L2 LINE L2 2160 2608 -706 231 167 0 0 chr5 193273322 193273364 -6356786 + (TA)n Simple_repeat Simple_repeat 1 42 0 2117 121 0 0 chr5 193273421 193273756 -6356394 + AluSx SINE Alu 1 312 0 2521 115 90 9 chr5 193274901 193275336 -6354814 - Tigger4(Zombi) DNA MER2_type 0 2731 2262 542 195 31 4 chr5 193275334 193275472 -6354678 - Tigger4(Zombi) DNA MER2_type -2585 146 2 * 666 309 159 18 chr5 193275591 193276093 -6354057 + L2 LINE L2 1993 2565 -749 34 55 0 0 chr5 193276722 193276777 -6353373 + AT_rich Low_complexity Low_complexity 1 55 0 822 248 56 46 chr5 193277075 193277480 -6352670 - L2 LINE L2 -118 3195 2776 755 259 92 61 chr5 193278264 193278328 -6351822 - L1MC4 LINE L1 0 8042 7981 1051 161 36 54 chr5 193278328 193278551 -6351599 + MER20 DNA MER1_type 1 219 0 755 259 92 61 chr5 193278551 193278608 -6351542 - L1MC4 LINE L1 -61 7981 7927 237 65 0 0 chr5 193278608 193278639 -6351511 + (CA)n Simple_repeat Simple_repeat 2 32 0 755 259 92 61 chr5 193278639 193279092 -6351058 - L1MC4 LINE L1 -115 7927 7449 207 254 15 15 chr5 193279310 193279377 -6350773 + C-rich Low_complexity Low_complexity 2 68 0 514 205 32 32 chr5 193279386 193279542 -6350608 + MLT1B LTR MaLR 208 363 -27 236 319 67 57 chr5 193279571 193280079 -6350071 - L2 LINE L2 -2121 1193 681 216 272 5 5 chr5 193280485 193280689 -6349461 + (TG)n Simple_repeat Simple_repeat 1 204 0 263 28 28 0 chr5 193280694 193280730 -6349420 + (GA)n Simple_repeat Simple_repeat 2 38 0 1045 132 0 24 chr5 193280999 193281166 -6348984 + FRAM SINE Alu 1 163 -13 483 307 58 47 chr5 193281170 193281655 -6348495 - L1ME LINE L1 -313 5808 5319 374 348 35 0 chr5 193282024 193282139 -6348011 + L2 LINE L2 3112 3230 -42 365 217 118 59 chr5 193282699 193282920 -6347230 - MLT1K LTR MaLR -342 246 13 497 259 94 18 chr5 193282926 193283096 -6347054 + MIR SINE MIR 39 221 -41 655 292 87 11 chr5 193283434 193283619 -6346531 + MIR SINE MIR 14 212 -50 561 216 147 16 chr5 193283680 193283870 -6346280 + MER113 DNA MER1_type? 4 218 -303 952 235 20 0 chr5 193283872 193284076 -6346074 - MIR SINE MIR -21 241 34 504 274 56 15 chr5 193284178 193284375 -6345775 + MER113 DNA MER1_type? 312 516 -5 260 295 122 48 chr5 193284517 193284853 -6345297 + L1MC4a LINE L1 6166 6526 -1282 342 167 0 15 chr5 193284953 193285019 -6345131 + MLT1K LTR MaLR 522 586 -2 538 234 80 75 chr5 193285020 193285259 -6344891 - MIR SINE MIR -3 259 20 322 345 81 18 chr5 193287082 193287305 -6342845 - MIR SINE MIR -19 243 7 317 274 43 55 chr5 193287330 193287494 -6342656 - L1ME4a LINE L1 -168 5953 5792 261 0 0 0 chr5 193287630 193287659 -6342491 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2461 86 0 0 chr5 193287946 193288248 -6341902 - AluSg SINE Alu -8 302 1 1813 140 49 11 chr5 193288259 193288544 -6341606 - AluJo SINE Alu -16 296 1 333 284 61 56 chr5 193288810 193289007 -6341143 + MIR SINE MIR 48 245 -17 313 211 13 53 chr5 193289585 193289661 -6340489 + L2 LINE L2 3240 3312 -1 1968 115 97 0 chr5 193290868 193291147 -6339003 - AluSx SINE Alu -6 306 1 362 345 153 0 chr5 193292102 193292279 -6337871 - MIR SINE MIR -57 205 2 397 307 47 27 chr5 193292550 193292700 -6337450 - L2 LINE L2 0 3313 3161 232 256 85 24 chr5 193293020 193293102 -6337048 + MIR SINE MIR 65 151 -111 446 291 76 13 chr5 193293697 193293855 -6336295 - MIR SINE MIR -88 174 7 2596 75 0 0 chr5 193294175 193294480 -6335670 - AluY SINE Alu -6 305 1 2135 117 0 3 chr5 193295819 193296101 -6334049 + AluSx SINE Alu 1 281 -31 508 294 112 74 chr5 193296488 193296540 -6333610 + L2 LINE L2 2936 2985 -287 249 57 0 0 chr5 193296540 193296575 -6333575 + (CA)n Simple_repeat Simple_repeat 2 36 0 508 294 112 74 chr5 193296575 193296845 -6333305 + L2 LINE L2 2985 3270 -2 233 228 177 25 chr5 193297512 193297591 -6332559 + MLT1K LTR MaLR 2 92 -496 2348 100 0 25 chr5 193297735 193298055 -6332095 - AluSx SINE Alu 0 312 1 374 278 87 9 chr5 193298057 193298172 -6331978 + L2 LINE L2 2693 2816 -498 219 313 0 15 chr5 193298163 193298230 -6331920 + L2 LINE L2 2998 3063 -250 * 992 199 5 11 chr5 193298259 193298450 -6331700 - AluJb SINE Alu -7 305 116 1258 324 174 20 chr5 193298603 193298721 -6331429 - L2 LINE L2 -655 2659 2560 2141 140 25 28 chr5 193298721 193299085 -6331065 - MLT1A1 LTR MaLR -2 363 1 1258 324 174 20 chr5 193299085 193299121 -6331029 - L2 LINE L2 -754 2560 2531 2811 179 72 49 chr5 193299121 193299831 -6330319 + LTR8A LTR ERV1 2 727 0 1258 324 174 20 chr5 193299831 193300423 -6329727 - L2 LINE L2 -783 2531 2031 1921 154 9 38 chr5 193300423 193300564 -6329586 + AluJb SINE Alu 1 144 -168 2067 138 0 16 chr5 193300564 193300875 -6329275 + AluSx SINE Alu 3 308 -4 1921 154 9 38 chr5 193300875 193301052 -6329098 + AluJb SINE Alu 144 310 -2 1258 324 174 20 chr5 193301052 193301136 -6329014 - L2 LINE L2 -1283 2031 1961 993 267 4 9 chr5 193301136 193301361 -6328789 - MER58A DNA MER1_type 0 224 1 1258 324 174 20 chr5 193301361 193301801 -6328349 - L2 LINE L2 -1353 1961 1191 646 175 39 39 chr5 193301803 193301957 -6328193 + MLT1A1 LTR MaLR 14 167 -198 476 317 176 9 chr5 193303089 193303408 -6326742 - L2 LINE L2 0 3313 2942 236 254 18 0 chr5 193303469 193303524 -6326626 - MIR SINE MIR -62 146 91 365 306 37 0 chr5 193303588 193303696 -6326454 - MIR SINE MIR -90 172 61 2247 125 3 0 chr5 193303986 193304290 -6325860 - AluSx SINE Alu -7 305 1 237 287 57 33 chr5 193305040 193305162 -6324988 + L2 LINE L2 3181 3305 -8 257 276 13 13 chr5 193305193 193305269 -6324881 + GA-rich Low_complexity Low_complexity 4 79 0 336 305 54 18 chr5 193305321 193305488 -6324662 + L3 LINE CR1 946 1118 -459 318 273 27 18 chr5 193305492 193305602 -6324548 + L3 LINE CR1 1398 1508 -69 392 284 47 8 chr5 193306033 193306160 -6323990 - MIR SINE MIR -82 180 49 339 230 23 0 chr5 193307003 193307090 -6323060 - MIR SINE MIR -115 147 59 1248 124 0 0 chr5 193307212 193307405 -6322745 + L1PB4 LINE L1 5717 5909 -247 834 144 0 50 chr5 193307405 193307521 -6322629 + AluSq/x SINE Alu 2 111 -201 1318 190 15 18 chr5 193307521 193307539 -6322611 + L1PB4 LINE L1 5884 5901 -255 1901 136 17 0 chr5 193307539 193307841 -6322309 + AluSx SINE Alu 1 307 -5 1318 190 15 18 chr5 193307841 193308096 -6322054 + L1PB4 LINE L1 5901 6156 0 834 144 0 50 chr5 193308096 193308118 -6322032 + AluSq/x SINE Alu 111 133 -179 2159 78 10 7 chr5 193308160 193308456 -6321694 - AluY SINE Alu -13 298 2 308 291 70 63 chr5 193309835 193310106 -6320044 + L2 LINE L2 2922 3194 -78 2078 119 3 0 chr5 193310147 193310449 -6319701 - AluSq SINE Alu -10 303 1 536 263 87 71 chr5 193310537 193310803 -6319347 - L1ME4a LINE L1 -2 6119 5850 2036 109 31 0 chr5 193311108 193311401 -6318749 - AluSx SINE Alu -10 302 1 180 0 0 0 chr5 193311701 193311721 -6318429 + (CCCCAG)n Simple_repeat Simple_repeat 2 21 0 248 180 33 16 chr5 193313655 193313716 -6316434 + GA-rich Low_complexity Low_complexity 6 67 0 295 264 104 31 chr5 193315800 193315963 -6314187 - MER104 DNA Tc2 0 180 6 368 277 46 15 chr5 193315964 193316094 -6314056 - MIR SINE MIR -107 155 22 221 290 32 0 chr5 193316772 193316834 -6313316 + L2 LINE L2 3204 3267 -5 202 283 0 0 chr5 193316899 193316945 -6313205 - L2 LINE L2 -8 3264 3219 360 278 65 78 chr5 193317966 193318211 -6311939 + L1ME4a LINE L1 5520 5761 -360 564 269 136 12 chr5 193318211 193318606 -6311544 - MLT1K LTR MaLR 0 588 88 1669 133 8 8 chr5 193318646 193318909 -6311241 + AluSg SINE Alu 47 309 -1 470 320 14 0 chr5 193319030 193319177 -6310973 + MIR SINE MIR 87 235 -27 335 339 7 53 chr5 193319192 193319475 -6310675 + L1ME4a LINE L1 5836 6105 -16 2269 86 3 3 chr5 193320192 193320494 -6309656 + AluSq SINE Alu 1 302 -11 835 291 122 28 chr5 193320499 193320853 -6309297 - MLT1K LTR MaLR -2 586 200 360 303 125 7 chr5 193321263 193321415 -6308735 - MIR SINE MIR 0 262 93 195 276 66 0 chr5 193321581 193321657 -6308493 - MIR SINE MIR -146 116 36 230 289 0 0 chr5 193321695 193321747 -6308403 + polypurine Low_complexity Low_complexity 3 54 0 342 93 103 28 chr5 193322590 193322697 -6307453 - Harlequin LTR ERV1 -5942 954 840 1227 228 84 117 chr5 193322807 193323517 -6306633 - Harlequin LTR ERV1 -5962 687 1 1651 174 82 39 chr5 193323526 193323916 -6306234 - LTR10A LTR ERV1 -61 548 142 194 0 39 0 chr5 193323962 193323988 -6306162 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 277 267 0 47 chr5 193324445 193324531 -6305619 + MIR SINE MIR 126 207 -55 354 302 43 0 chr5 193324732 193324848 -6305302 + MIR SINE MIR 24 144 -118 4229 187 34 47 chr5 193324939 193325905 -6304245 + LTR13 LTR ERVK 1 954 0 490 301 151 9 chr5 193327249 193327716 -6302434 + L2 LINE L2 2725 3266 -6 2059 111 34 0 chr5 193328251 193328549 -6301601 - AluSx SINE Alu -4 308 1 286 283 30 50 chr5 193329095 193329194 -6300956 + MIR SINE MIR 108 204 -58 211 205 0 0 chr5 193329737 193329776 -6300374 - L2 LINE L2 -14 3299 3261 * 586 225 51 123 chr5 193329743 193329996 -6300154 - MIR SINE MIR -14 248 14 564 311 31 45 chr5 193330436 193330658 -6299492 - MIR SINE MIR -14 248 30 216 260 20 40 chr5 193330902 193330994 -6299156 + MIR SINE MIR 87 142 -66 236 237 24 86 chr5 193331319 193331472 -6298678 + MIR SINE MIR 15 147 -61 231 286 91 13 chr5 193331918 193331995 -6298155 - MIR SINE MIR -102 160 78 439 295 81 17 chr5 193332530 193332703 -6297447 - MIR SINE MIR -55 207 24 506 196 270 0 chr5 193333426 193333574 -6296576 - MER5A DNA MER1_type 0 189 2 249 233 27 27 chr5 193333656 193333729 -6296421 + MIR SINE MIR 113 185 -77 221 312 165 65 chr5 193334200 193334652 -6295498 - L2 LINE L2 -3 3269 2766 689 304 24 20 chr5 193334672 193334919 -6295231 + MIR SINE MIR 15 262 0 2155 114 7 0 chr5 193334921 193335228 -6294922 - AluSx SINE Alu -3 309 1 430 322 114 42 chr5 193335251 193335767 -6294383 - L2 LINE L2 -566 2748 2178 2277 78 3 23 chr5 193335767 193336074 -6294076 + AluSg SINE Alu 1 301 -9 430 322 114 42 chr5 193336074 193336182 -6293968 - L2 LINE L2 -1136 2178 2079 1257 265 87 14 chr5 193336188 193336754 -6293396 + L1M4 LINE L1 2350 2956 -3190 2184 125 0 6 chr5 193336932 193337245 -6292905 - AluSx SINE Alu -1 311 1 993 130 0 7 chr5 193337557 193337703 -6292447 + AluSq/x SINE Alu 1 145 -167 2307 68 0 3 chr5 193337703 193337997 -6292153 + AluY SINE Alu 1 293 -18 261 258 15 0 chr5 193338005 193338071 -6292079 - L1ME LINE L1 -5982 88 22 5146 104 9 23 chr5 193338366 193339304 -6290846 + HERV17 LTR ERV1 747 1718 -5178 336 241 161 0 chr5 193339304 193339391 -6290759 - LTR8 LTR ERV1 -434 257 157 17190 91 19 6 chr5 193339397 193342241 -6287909 + Harlequin LTR ERV1 1817 6644 -5 1764 201 92 60 chr5 193342242 193342773 -6287377 + LTR10A LTR ERV1 1 548 -61 265 276 82 31 chr5 193342788 193342886 -6287264 - MIR SINE MIR -89 119 17 231 345 82 9 chr5 193343618 193343728 -6286422 + MIR SINE MIR 90 207 -55 2243 107 3 0 chr5 193343737 193344045 -6286105 + AluSx SINE Alu 4 312 0 297 319 129 43 chr5 193344103 193344335 -6285815 - L3 LINE CR1 -11 1566 1315 341 296 101 24 chr5 193344826 193344995 -6285155 + MIR SINE MIR 79 260 -2 380 290 101 7 chr5 193345152 193345290 -6284860 - MIR SINE MIR -96 166 16 409 294 91 11 chr5 193345871 193346058 -6284092 + MIR SINE MIR 21 222 -40 366 333 129 26 chr5 193346461 193346848 -6283302 + L2 LINE L2 2826 3252 -20 378 268 203 14 chr5 193347085 193347223 -6282927 - MIR SINE MIR -72 190 27 354 199 40 74 chr5 193347298 193347474 -6282676 + MER112 DNA MER1_type 30 199 -61 435 217 39 23 chr5 193348155 193348284 -6281866 + MIR SINE MIR 103 233 -29 208 261 224 34 chr5 193348633 193348798 -6281352 + MIR SINE MIR 35 251 -11 633 265 43 22 chr5 193348998 193349183 -6280967 + MIR SINE MIR 1 189 -73 765 286 202 9 chr5 193349189 193349531 -6280619 - L2 LINE L2 0 3313 2906 432 326 99 29 chr5 193349721 193350064 -6280086 - L2 LINE L2 -10 3262 2896 363 192 39 0 chr5 193350590 193350668 -6279482 + MIR SINE MIR 38 118 -90 453 241 9 19 chr5 193351038 193351146 -6279004 + MIR SINE MIR 35 141 -67 1140 255 129 11 chr5 193353483 193353863 -6276287 + MLT1K LTR MaLR 162 586 -2 349 246 131 0 chr5 193354170 193354292 -6275858 - MIR SINE MIR -33 229 92 * 377 222 45 30 chr5 193354268 193354416 -6275734 + MIR SINE MIR 40 189 -70 544 231 15 0 chr5 193354955 193355085 -6275065 + MER5A DNA MER1_type 1 132 -57 274 235 12 24 chr5 193355140 193355225 -6274925 + (CGGGG)n Simple_repeat Simple_repeat 5 88 0 25 65 0 0 chr5 193355775 193355821 -6274329 + GC_rich Low_complexity Low_complexity 1 46 0 278 282 0 14 chr5 193356234 193356305 -6273845 + CT-rich Low_complexity Low_complexity 2 71 0 762 206 43 77 chr5 193356415 193356648 -6273502 - MIR SINE MIR -30 232 8 257 295 39 0 chr5 193356658 193356736 -6273414 + L2 LINE L2 3209 3289 -24 2401 88 0 3 chr5 193356802 193357098 -6273052 - AluSq SINE Alu -18 295 1 389 287 110 0 chr5 193357245 193357381 -6272769 + L2 LINE L2 3121 3271 -1 268 261 91 0 chr5 193357693 193357781 -6272369 + Charlie8 DNA MER1_type 108 203 -2214 285 216 134 10 chr5 193358048 193358145 -6272005 + L1ME4a LINE L1 5990 6098 -23 1788 138 191 6 chr5 193358150 193358511 -6271639 + MSTA LTR MaLR 1 428 0 535 215 189 8 chr5 193358540 193358800 -6271350 + L1ME4a LINE L1 5813 6119 -2 588 275 98 33 chr5 193359019 193359263 -6270887 + MIR SINE MIR 2 261 -1 282 364 25 0 chr5 193359264 193359385 -6270765 - L2 LINE L2 -13 3259 3136 446 270 53 13 chr5 193360044 193360196 -6269954 - MIR SINE MIR -74 188 31 263 346 102 0 chr5 193360611 193360738 -6269412 - L2 LINE L2 -768 2546 2407 407 298 111 12 chr5 193360851 193361103 -6269047 - L2 LINE L2 -878 2436 2160 180 335 174 0 chr5 193361514 193361681 -6268469 - L2 LINE L2 -1549 1765 1570 240 260 55 14 chr5 193361912 193361985 -6268165 + MIR SINE MIR 113 188 -74 328 218 0 0 chr5 193362335 193362413 -6267737 + MIR SINE MIR 61 138 -70 348 305 149 17 chr5 193362504 193362678 -6267472 + MIR SINE MIR 55 251 -11 1453 277 78 33 chr5 193362743 193363295 -6266855 + MLT1K LTR MaLR 10 586 -2 800 207 43 30 chr5 193363497 193363729 -6266421 + MER46A DNA MER2_type 2 236 0 2144 84 3 28 chr5 193364215 193364499 -6265651 + AluSx SINE Alu 1 277 -35 615 203 23 0 chr5 193364743 193364876 -6265274 - MER5B DNA MER1_type -27 151 16 265 356 0 0 chr5 193364893 193364980 -6265170 + MIR SINE MIR 54 140 -68 324 173 75 135 chr5 193365187 193365224 -6264926 + MER53 DNA DNA 1 39 -150 2363 95 0 3 chr5 193365224 193365528 -6264622 - AluSx SINE Alu -2 310 8 324 173 75 135 chr5 193365528 193365623 -6264527 + MER53 DNA DNA 39 125 -64 1006 133 53 7 chr5 193365632 193365783 -6264367 + AluJb SINE Alu 132 289 -23 403 139 0 0 chr5 193365787 193365859 -6264291 - MER53 DNA DNA -117 72 1 860 254 16 28 chr5 193367275 193367527 -6262623 - MIR SINE MIR -13 249 1 1107 196 88 39 chr5 193367662 193367968 -6262182 + L1ME2 LINE L1 5725 6045 -119 1043 144 89 0 chr5 193368152 193368354 -6261796 + L1MB5 LINE L1 5955 6174 0 539 231 12 0 chr5 193368580 193368749 -6261401 + (TGAA)n Simple_repeat Simple_repeat 1 171 0 544 264 148 0 chr5 193368765 193368981 -6261169 + MIR SINE MIR 3 250 -12 1155 272 128 14 chr5 193371103 193371816 -6258334 - L2 LINE L2 0 3313 2522 2205 118 0 26 chr5 193371937 193372243 -6257907 - AluSx SINE Alu -14 298 1 375 240 20 0 chr5 193372424 193372524 -6257626 - MIR3 SINE MIR -20 188 87 310 289 11 0 chr5 193372722 193372812 -6257338 + MLT1K LTR MaLR 1 91 -497 281 269 5 137 chr5 193373126 193373283 -6256867 - L3 LINE CR1 -629 948 825 2050 122 3 32 chr5 193373283 193373594 -6256556 - AluSx SINE Alu -7 305 4 281 269 5 137 chr5 193373594 193373648 -6256502 - L3 LINE CR1 -752 825 765 735 220 57 17 chr5 193373703 193373880 -6256270 - MIR SINE MIR -66 196 13 227 332 19 87 chr5 193373909 193374117 -6256033 - L3 LINE CR1 -853 724 531 2437 74 0 10 chr5 193374193 193374492 -6255658 - AluY SINE Alu -15 296 1 629 211 69 29 chr5 193374959 193375134 -6255016 - MIR SINE MIR 0 262 81 680 255 18 25 chr5 193375222 193375442 -6254708 - MIR SINE MIR -38 224 7 589 287 102 4 chr5 193375636 193375848 -6254302 + MIR SINE MIR 28 256 -6 403 259 12 10 chr5 193375946 193376078 -6254072 + MIR SINE MIR 17 150 -58 687 232 96 6 chr5 193376182 193376359 -6253791 + MIR SINE MIR 60 252 -10 972 262 12 12 chr5 193376412 193376660 -6253490 + MIR SINE MIR 1 248 -14 234 264 192 4 chr5 193377332 193377478 -6252672 + MIR SINE MIR 74 245 -17 2286 112 26 3 chr5 193377668 193377973 -6252177 - AluSx SINE Alu 0 312 1 243 233 68 27 chr5 193378116 193378189 -6251961 + MIR SINE MIR 117 192 -70 276 243 14 0 chr5 193378282 193378352 -6251798 + MIR SINE MIR 45 115 -93 243 244 50 5 chr5 193378885 193378973 -6251177 - MIR SINE MIR -63 145 50 728 279 31 4 chr5 193379088 193379317 -6250833 + MIR SINE MIR 14 248 -14 751 330 55 17 chr5 193379382 193379857 -6250293 + L1ME4a LINE L1 5606 6098 -23 1682 158 48 31 chr5 193379862 193380153 -6249997 - AluJo SINE Alu -16 296 1 2052 257 49 48 chr5 193380571 193380739 -6249411 + L1ME3A LINE L1 4450 4616 -1554 342 0 0 0 chr5 193380739 193380777 -6249373 + (TG)n Simple_repeat Simple_repeat 2 39 0 2052 257 49 48 chr5 193380777 193382099 -6248051 + L1ME3A LINE L1 4616 5936 -234 315 206 71 92 chr5 193382117 193382258 -6247892 + L1ME3A LINE L1 5925 6062 -108 578 306 16 0 chr5 193382559 193382752 -6247398 + Charlie2a DNA MER1_type 1467 1662 -1200 505 171 62 41 chr5 193382735 193382881 -6247269 + Charlie2a DNA MER1_type 2693 2841 -21 * 2308 113 0 0 chr5 193382903 193383213 -6246937 - AluSx SINE Alu -2 310 1 434 199 78 49 chr5 193383980 193384122 -6246028 + MIR SINE MIR 22 166 -42 315 316 25 6 chr5 193384288 193384446 -6245704 - L2 LINE L2 -209 3104 2944 395 133 0 12 chr5 193384911 193384994 -6245156 + (TGAA)n Simple_repeat Simple_repeat 1 82 0 994 281 79 28 chr5 193386110 193386678 -6243472 + L2 LINE L2 2718 3313 0 367 163 33 24 chr5 193386681 193386795 -6243355 - MIR SINE MIR -61 147 69 241 350 0 0 chr5 193387314 193387394 -6242756 - HsTC2 DNA Tc2 -1813 85 6 203 302 8 71 chr5 193387511 193387637 -6242513 + L2 LINE L2 2919 3036 -236 359 261 51 29 chr5 193387815 193387953 -6242197 - MER5A DNA MER1_type 0 189 49 295 314 20 0 chr5 193387862 193387964 -6242186 + MER5A DNA MER1_type 57 160 -29 * 2320 99 0 7 chr5 193388017 193388320 -6241830 + AluSq SINE Alu 1 301 -12 218 314 57 40 chr5 193389274 193389398 -6240752 + MIR SINE MIR 57 182 -80 291 323 94 14 chr5 193389663 193389886 -6240264 + L2 LINE L2 2664 2904 -410 2247 123 0 0 chr5 193390008 193390310 -6239840 - AluSg SINE Alu -8 302 1 397 288 15 38 chr5 193390364 193390428 -6239722 + L2 LINE L2 3166 3230 -83 1880 158 57 11 chr5 193390428 193390777 -6239373 + MLT1A1 LTR MaLR 1 365 0 397 288 15 38 chr5 193390777 193390844 -6239306 + L2 LINE L2 3230 3294 -19 454 279 85 5 chr5 193391037 193391238 -6238912 + MIR SINE MIR 36 252 -10 659 228 25 25 chr5 193391441 193391603 -6238547 - MER21B LTR ERV1 -373 490 329 2414 94 0 0 chr5 193392085 193392384 -6237766 - AluSq SINE Alu -14 299 1 558 251 39 39 chr5 193392973 193393152 -6236998 - MIR SINE MIR -20 242 64 422 285 170 17 chr5 193393163 193393398 -6236752 + L1ME LINE L1 5554 5824 -297 467 244 129 42 chr5 193393463 193393656 -6236494 + MIR SINE MIR 51 260 -2 618 196 170 36 chr5 193393664 193393817 -6236333 - L1MEc LINE L1 -5073 1323 1192 2235 87 27 13 chr5 193393817 193394117 -6236033 - AluSx SINE Alu -8 304 1 618 196 170 36 chr5 193394117 193394239 -6235911 - L1MEc LINE L1 -5204 1192 1011 3445 130 32 5 chr5 193394254 193394871 -6235279 - L1MA8 LINE L1 0 6291 5658 6585 133 19 28 chr5 193394874 193395251 -6234899 - L1MA8 LINE L1 -932 5214 4835 2098 135 10 0 chr5 193395251 193395548 -6234602 + AluSx SINE Alu 1 300 -12 6585 133 19 28 chr5 193395548 193396390 -6233760 - L1MA8 LINE L1 -1311 4835 4006 3616 226 45 39 chr5 193396392 193397357 -6232793 - L1MEc LINE L1 -5413 983 14 249 222 177 41 chr5 193397407 193397515 -6232635 - MIR SINE MIR -80 128 8 268 125 21 0 chr5 193398162 193398210 -6231940 + MIR SINE MIR 88 136 -72 1674 158 46 11 chr5 193398210 193398374 -6231776 - AluJb SINE Alu -17 295 115 225 0 0 0 chr5 193398374 193398399 -6231751 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1674 158 46 11 chr5 193398399 193398519 -6231631 - AluJb SINE Alu -197 115 1 203 274 32 0 chr5 193398585 193398647 -6231503 + L2 LINE L2 3209 3272 0 246 206 78 49 chr5 193399165 193399267 -6230883 - L1ME4a LINE L1 -56 6065 5961 183 129 0 0 chr5 193399488 193399519 -6230631 + (TG)n Simple_repeat Simple_repeat 1 31 0 438 325 16 21 chr5 193399536 193399730 -6230420 - L1ME4a LINE L1 -201 5920 5728 2649 54 0 6 chr5 193399742 193400055 -6230095 - AluY SINE Alu 0 311 1 585 209 81 52 chr5 193400107 193400279 -6229871 + MER63A DNA MER1_type 31 207 -3 551 289 30 53 chr5 193400314 193400577 -6229573 - L1ME4a LINE L1 -455 5666 5410 659 255 10 60 chr5 193401016 193401216 -6228934 + MIR SINE MIR 72 261 -1 561 55 0 0 chr5 193401615 193401688 -6228462 + (TCCA)n Simple_repeat Simple_repeat 1 73 0 562 328 129 25 chr5 193401760 193402270 -6227880 + L2 LINE L2 2753 3312 -1 307 281 178 14 chr5 193402595 193402741 -6227409 + MIR SINE MIR 17 186 -76 844 238 75 106 chr5 193403543 193403959 -6226191 + MLT1J2 LTR MaLR 24 426 -24 337 392 7 0 chr5 193403985 193404128 -6226022 - MIR SINE MIR -27 235 92 1792 144 32 51 chr5 193404590 193404903 -6225247 - AluJb SINE Alu -5 307 1 241 360 13 0 chr5 193404960 193405035 -6225115 - MIR SINE MIR -140 122 47 192 162 14 27 chr5 193406453 193406527 -6223623 + GA-rich Low_complexity Low_complexity 2 74 0 341 230 14 0 chr5 193407074 193407148 -6223002 - MIR SINE MIR -56 152 78 2096 101 42 7 chr5 193408064 193408382 -6221768 + AluSx SINE Alu 1 312 0 280 228 9 88 chr5 193408450 193408564 -6221586 + MLT1K LTR MaLR 458 562 -26 196 333 117 17 chr5 193408639 193408759 -6221391 + MIR SINE MIR 110 241 -21 2227 145 22 8 chr5 193409392 193409792 -6220358 - L1MB8 LINE L1 0 6178 5773 1991 104 9 31 chr5 193409793 193410111 -6220039 + AluSx SINE Alu 1 311 -1 203 61 30 0 chr5 193410117 193410150 -6220000 + (CAAAA)n Simple_repeat Simple_repeat 3 36 0 1844 181 19 8 chr5 193410158 193410517 -6219633 - L1MB8 LINE L1 -392 5786 5424 246 298 60 0 chr5 193410600 193410684 -6219466 - L1ME LINE L1 -363 5801 5713 262 212 7 117 chr5 193410731 193410868 -6219282 + MIR3 SINE MIR 1 122 -86 333 0 0 0 chr5 193410972 193411009 -6219141 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 189 271 156 10 chr5 193411165 193411261 -6218889 + MIR SINE MIR 38 147 -115 478 247 156 0 chr5 193411281 193411512 -6218638 + LTR33 LTR ERVL 15 281 -240 902 95 38 18 chr5 193412280 193412941 -6217209 + (TG)n Simple_repeat Simple_repeat 1 857 0 2215 105 7 7 chr5 193413125 193413430 -6216720 + AluSq SINE Alu 1 305 -8 3449 108 31 29 chr5 193413435 193413728 -6216422 - L1MA5A LINE L1 -219 6078 5787 2425 105 0 0 chr5 193413728 193414041 -6216109 - AluSq SINE Alu 0 313 1 3449 108 31 29 chr5 193414041 193414331 -6215819 - L1MA5A LINE L1 -510 5787 5494 186 184 163 0 chr5 193414471 193414520 -6215630 + MIR SINE MIR 192 248 -14 * 193 214 24 0 chr5 193414489 193414531 -6215619 + L2 LINE L2 3262 3304 -9 445 188 86 26 chr5 193414534 193414651 -6215499 + L1MC1 LINE L1 6210 6333 0 484 320 64 0 chr5 193414818 193414990 -6215160 - MIR SINE MIR -60 202 20 1193 85 39 0 chr5 193415247 193415400 -6214750 + AluSg/x SINE Alu 138 296 -16 297 240 7 93 chr5 193415611 193415684 -6214466 + L1MC4 LINE L1 6473 6528 -1514 2518 70 0 3 chr5 193415684 193415986 -6214164 + AluY SINE Alu 1 301 -10 297 240 7 93 chr5 193415986 193416062 -6214088 + L1MC4 LINE L1 6528 6609 -1433 727 267 150 24 chr5 193416078 193416540 -6213610 + L1MC4 LINE L1 6717 7289 -736 950 282 40 21 chr5 193416748 193417074 -6213076 + LTR16B LTR ERVL 133 464 0 527 231 169 6 chr5 193417142 193417311 -6212839 + MIR SINE MIR 49 248 -14 464 258 66 48 chr5 193417365 193417532 -6212618 + MIR SINE MIR 93 262 0 1840 195 21 27 chr5 193417555 193417929 -6212221 - MLT1A2 LTR MaLR 0 374 3 556 242 167 11 chr5 193418000 193418186 -6211964 + MIR SINE MIR 34 248 -14 198 71 0 0 chr5 193418374 193418402 -6211748 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 183 196 43 22 chr5 193418452 193418498 -6211652 + MIR3 SINE MIR 121 167 -41 410 155 0 10 chr5 193420407 193420510 -6209640 + (TCCA)n Simple_repeat Simple_repeat 1 102 0 268 300 0 38 chr5 193420510 193420590 -6209560 + L2 LINE L2 3195 3271 -1 2228 104 4 0 chr5 193421226 193421506 -6208644 + AluSx SINE Alu 1 281 -31 884 196 80 25 chr5 193421645 193421844 -6208306 - MIR SINE MIR -5 257 48 4224 139 34 38 chr5 193421855 193421903 -6208247 - L1MB7 LINE L1 -1 6183 6136 2345 100 0 3 chr5 193421903 193422214 -6207936 + AluSx SINE Alu 1 310 -2 4224 139 34 38 chr5 193422214 193422854 -6207296 - L1MB7 LINE L1 -48 6136 5496 2199 123 3 0 chr5 193422854 193423155 -6206995 - AluSx SINE Alu -10 302 1 4224 139 34 38 chr5 193423155 193423233 -6206917 - L1MB7 LINE L1 -688 5496 5419 302 199 7 53 chr5 193423516 193423667 -6206483 + C-rich Low_complexity Low_complexity 4 147 0 479 241 26 0 chr5 193423800 193423916 -6206234 + MIR SINE MIR 36 154 -108 542 91 0 0 chr5 193423925 193424002 -6206148 - L1MB2 LINE L1 -265 5906 5830 190 211 53 18 chr5 193424636 193424693 -6205457 + L2 LINE L2 3214 3272 0 730 255 192 9 chr5 193424930 193425358 -6204792 + LTR33 LTR ERVL 13 518 -3 5106 130 5 42 chr5 193425721 193426425 -6203725 - L1MB3 LINE L1 -2 6181 5453 262 0 53 0 chr5 193426425 193426463 -6203687 + (TTTTG)n Simple_repeat Simple_repeat 3 42 0 2131 108 11 0 chr5 193426463 193426742 -6203408 - AluSx SINE Alu -30 282 1 1726 176 3 17 chr5 193426742 193427044 -6203106 - AluJo SINE Alu -14 298 1 5106 130 5 42 chr5 193427044 193427263 -6202887 - L1MB3 LINE L1 -727 5456 5290 1409 163 34 24 chr5 193427553 193427847 -6202303 + MER41B LTR ERV1 339 635 0 1565 172 93 0 chr5 193428090 193428369 -6201781 - AluSx SINE Alu -7 305 1 784 149 12 56 chr5 193428369 193428530 -6201620 - L1M4 LINE L1 -690 5488 5335 353 264 275 0 chr5 193428767 193428960 -6201190 - MIR SINE MIR -5 257 12 570 299 90 0 chr5 193429547 193429724 -6200426 - MIR SINE MIR -19 243 51 447 271 56 21 chr5 193430678 193430822 -6199328 - MIR SINE MIR -45 217 69 2663 65 0 0 chr5 193430829 193431137 -6199013 + AluY SINE Alu 1 308 -3 549 183 25 17 chr5 193431154 193431274 -6198876 + MLT1A2 LTR MaLR 32 152 -213 618 94 0 21 chr5 193431276 193431372 -6198778 + FLAM_A SINE Alu 49 142 0 870 163 96 43 chr5 193431373 193431582 -6198568 + MLT1A2 LTR MaLR 155 374 0 381 291 79 36 chr5 193431755 193431920 -6198230 - MIR SINE MIR -71 191 20 230 213 11 11 chr5 193432038 193432094 -6198056 + MIR SINE MIR 98 151 -111 1966 131 0 14 chr5 193432096 193432386 -6197764 - AluJo SINE Alu -11 301 16 373 66 33 0 chr5 193434106 193434167 -6195983 + (TGGA)n Simple_repeat Simple_repeat 1 63 0 201 318 206 0 chr5 193434186 193434293 -6195857 + L2 LINE L2 3142 3270 -2 378 309 72 14 chr5 193435120 193435259 -6194891 + MIR SINE MIR 110 256 -6 186 133 0 0 chr5 193436105 193436135 -6194015 + (TG)n Simple_repeat Simple_repeat 1 30 0 290 239 11 33 chr5 193436136 193436228 -6193922 + (CATATA)n Simple_repeat Simple_repeat 6 95 0 316 224 47 118 chr5 193436394 193436468 -6193682 - L1ME LINE L1 -440 5681 5603 2180 140 0 0 chr5 193436468 193436775 -6193375 - AluSx SINE Alu -5 307 1 316 224 47 118 chr5 193436775 193436870 -6193280 - L1ME LINE L1 -518 5603 5524 803 249 104 15 chr5 193436881 193437082 -6193068 + MIR SINE MIR 13 231 -31 1506 214 64 39 chr5 193437201 193437640 -6192510 - MLT1D LTR MaLR -55 450 1 407 295 41 8 chr5 193437721 193437843 -6192307 + MIR SINE MIR 28 153 -109 1989 135 45 3 chr5 193437919 193438207 -6191943 - AluJo SINE Alu -12 300 1 778 264 31 5 chr5 193439153 193439346 -6190804 + MIR SINE MIR 23 220 -42 451 201 53 15 chr5 193439733 193439876 -6190274 - MIR SINE MIR -62 146 9 2370 101 3 0 chr5 193439885 193440182 -6189968 - AluSx SINE Alu -14 298 1 976 110 0 0 chr5 193440183 193440310 -6189840 - FRAM SINE Alu -7 169 43 910 75 67 0 chr5 193440780 193440900 -6189250 + AluSg/x SINE Alu 170 297 -15 261 0 0 0 chr5 193440900 193440929 -6189221 + (TA)n Simple_repeat Simple_repeat 1 29 0 371 232 21 32 chr5 193440938 193441033 -6189117 + MER96B DNA MER1_type? 324 417 0 529 268 137 0 chr5 193441033 193441186 -6188964 + MIR SINE MIR 89 262 0 2005 110 7 0 chr5 193441792 193442059 -6188091 + AluSx SINE Alu 35 304 -4 201 39 0 0 chr5 193442059 193442085 -6188065 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 325 275 32 104 chr5 193442637 193442888 -6187262 - L1M4 LINE L1 -3238 2908 2676 2620 52 0 7 chr5 193442889 193443199 -6186951 + AluY SINE Alu 2 309 -2 711 322 39 0 chr5 193443269 193443499 -6186651 - MIR SINE MIR -2 260 22 234 303 13 0 chr5 193443898 193443974 -6186176 + MIR SINE MIR 53 129 -133 2364 109 0 0 chr5 193444236 193444549 -6185601 + AluSq SINE Alu 1 313 0 510 252 61 26 chr5 193444549 193444950 -6185200 + MER90 LTR ERV1 5 488 -126 1877 160 13 26 chr5 193445231 193445538 -6184612 + AluSx SINE Alu 1 303 -9 4343 216 146 15 chr5 193445696 193446601 -6183549 + L1MDa LINE L1 27 1132 -5408 1941 141 13 16 chr5 193446601 193446906 -6183244 + AluSx SINE Alu 1 304 -8 4343 216 146 15 chr5 193446906 193447209 -6182941 + L1MDa LINE L1 1132 1394 -5146 21 36 0 0 chr5 193447426 193447454 -6182696 + AT_rich Low_complexity Low_complexity 1 28 0 195 239 403 0 chr5 193447514 193447581 -6182569 - L2 LINE L2 -1 3271 3178 34 24 0 0 chr5 193447590 193447631 -6182519 + AT_rich Low_complexity Low_complexity 1 41 0 2401 102 0 0 chr5 193447830 193448135 -6182015 - AluSg SINE Alu -4 306 2 426 179 24 24 chr5 193448213 193448297 -6181853 - MER58B DNA MER1_type 0 341 258 272 48 24 0 chr5 193448372 193448414 -6181736 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 2258 108 0 0 chr5 193448431 193448717 -6181433 + AluSq SINE Alu 3 288 -25 800 79 59 13 chr5 193448717 193449170 -6180980 + (TA)n Simple_repeat Simple_repeat 1 473 0 949 254 89 56 chr5 193449221 193449581 -6180569 - L2 LINE L2 -55 3258 2911 1424 241 104 28 chr5 193449581 193450054 -6180096 - MLT1J LTR MaLR -2 509 1 949 254 89 56 chr5 193450054 193450096 -6180054 - L2 LINE L2 -402 2911 2872 853 139 0 29 chr5 193450096 193450233 -6179917 + FLAM_C SINE Alu 1 133 0 949 254 89 56 chr5 193450233 193450386 -6179764 - L2 LINE L2 -441 2872 2726 2321 108 0 3 chr5 193450386 193450691 -6179459 + AluSx SINE Alu 1 304 -8 2037 125 0 4 chr5 193450692 193451019 -6179131 + AluSc SINE Alu 1 326 0 949 254 89 56 chr5 193451019 193451060 -6179090 - L2 LINE L2 -586 2727 2621 211 220 20 0 chr5 193451086 193451136 -6179014 - L2 LINE L2 -290 2982 2932 349 232 107 0 chr5 193451201 193451313 -6178837 - L2 LINE L2 -562 2752 2629 185 265 255 0 chr5 193451815 193451917 -6178233 - L2 LINE L2 0 3272 3145 388 336 73 0 chr5 193452211 193452348 -6177802 + MIR SINE MIR 33 179 -83 918 184 58 0 chr5 193452711 193452885 -6177265 + MER63A DNA MER1_type 1 184 -26 2026 107 0 0 chr5 193452961 193453241 -6176909 - AluSx SINE Alu -32 280 1 786 287 99 28 chr5 193453596 193454274 -6175876 + L2 LINE L2 2550 3276 -37 327 240 71 55 chr5 193454709 193454892 -6175258 - Charlie7 DNA MER1_type 0 2612 2427 306 229 16 0 chr5 193455047 193455108 -6175042 - Charlie7 DNA MER1_type -2525 87 26 183 308 80 89 chr5 193455137 193455374 -6174776 + L2 LINE L2 2943 3177 -95 518 179 32 0 chr5 193455491 193455586 -6174564 - MER5A DNA MER1_type 0 189 92 1726 123 3 39 chr5 193455586 193455870 -6174280 + MLT1B LTR MaLR 1 274 -116 2061 119 3 13 chr5 193455871 193456174 -6173976 + AluSc SINE Alu 1 300 -9 324 0 0 0 chr5 193456174 193456210 -6173940 + (GA)n Simple_repeat Simple_repeat 1 36 0 505 41 14 14 chr5 193456210 193456283 -6173867 + (GGAA)n Simple_repeat Simple_repeat 2 74 0 682 225 28 0 chr5 193456283 193456425 -6173725 + MLT1B LTR MaLR 245 390 0 442 229 10 10 chr5 193456425 193456521 -6173629 - MER5A DNA MER1_type -93 96 1 743 239 148 13 chr5 193457287 193457605 -6172545 - MLT1K LTR MaLR -6 582 222 332 297 80 40 chr5 193457690 193457865 -6172285 + MIR SINE MIR 59 240 -22 290 318 18 0 chr5 193458085 193458195 -6171955 - L2 LINE L2 -4 3268 3157 298 275 0 44 chr5 193458310 193458401 -6171749 - MIR SINE MIR -63 145 59 415 259 85 3 chr5 193458921 193459077 -6171073 + MIR SINE MIR 23 192 -63 343 285 61 19 chr5 193459075 193459274 -6170876 - MIR SINE MIR -38 224 10 * 348 336 15 29 chr5 193460588 193460725 -6169425 - MIR SINE MIR -79 183 49 251 196 20 0 chr5 193460732 193460783 -6169367 - MER74B LTR ERVL 0 622 571 1766 226 17 67 chr5 193460920 193461397 -6168753 - MER74A LTR ERVL -92 466 14 261 215 28 93 chr5 193462036 193462143 -6168007 - MLT1K LTR MaLR -19 569 470 580 202 18 9 chr5 193462282 193462396 -6167754 - MLT1K LTR MaLR -324 264 150 243 0 0 0 chr5 193462656 193462683 -6167467 + (T)n Simple_repeat Simple_repeat 1 27 0 568 321 24 14 chr5 193462871 193463080 -6167070 + MIR SINE MIR 52 262 0 314 250 98 9 chr5 193463133 193463245 -6166905 - LTR67 LTR ERVL -6 551 430 560 243 18 24 chr5 193463302 193463471 -6166679 - LTR33A LTR ERVL -16 507 340 336 286 82 33 chr5 193463654 193463832 -6166318 - LTR33A LTR ERVL -361 162 21 501 299 25 44 chr5 193464439 193464643 -6165507 - MIR SINE MIR -37 225 26 372 307 124 7 chr5 193465933 193466070 -6164080 - MIR SINE MIR -14 248 96 2112 102 3 7 chr5 193466110 193466415 -6163735 - AluSx SINE Alu -8 304 1 381 277 202 24 chr5 193466600 193466813 -6163337 - MIR SINE MIR -5 257 7 401 271 178 28 chr5 193466875 193467089 -6163061 + MLT1K LTR MaLR 17 262 -326 2665 184 39 7 chr5 193467591 193468229 -6161921 + L1M4 LINE L1 5146 5804 -370 953 162 12 12 chr5 193468214 193468400 -6161750 + L1MC/D LINE L1 5433 5611 -647 * 302 233 273 55 chr5 193469511 193469549 -6160601 + L2 LINE L2 2712 2740 -573 2183 111 0 3 chr5 193469549 193469856 -6160294 + AluSx SINE Alu 1 306 -6 302 233 273 55 chr5 193469856 193470100 -6160050 + L2 LINE L2 2740 3046 -267 871 189 102 29 chr5 193470180 193470386 -6159764 + MIR SINE MIR 20 240 -22 805 177 0 0 chr5 193470418 193470548 -6159602 + FLAM_C SINE Alu 3 132 -1 1537 227 6 23 chr5 193471205 193471553 -6158597 + L1MEc LINE L1 465 806 -5590 417 252 19 0 chr5 193471559 193471662 -6158488 + L2 LINE L2 2555 2659 -655 740 262 167 15 chr5 193471662 193471986 -6158164 - MLT1I LTR MaLR -2 407 35 1245 253 53 67 chr5 193471996 193472608 -6157542 + L2 LINE L2 2684 3303 -10 1447 60 0 0 chr5 193472893 193473078 -6157072 - AluY SINE Alu -5 306 122 227 250 39 0 chr5 193473290 193473342 -6156808 - L2 LINE L2 0 3272 3219 769 254 168 48 chr5 193473382 193473693 -6156457 - L2 LINE L2 0 3272 3000 2177 104 10 0 chr5 193473693 193473991 -6156159 + AluSx SINE Alu 1 301 -11 769 254 168 48 chr5 193473991 193474244 -6155906 - L2 LINE L2 -272 3000 2655 395 260 133 57 chr5 193474336 193474563 -6155587 + MIR SINE MIR 20 260 -2 2138 86 20 7 chr5 193474613 193474905 -6155245 - AluSc SINE Alu -13 296 1 363 340 59 59 chr5 193475899 193476202 -6153948 - L2 LINE L2 -1 3271 2969 1682 145 20 20 chr5 193476233 193476530 -6153620 - MER41B LTR ERV1 0 635 339 240 146 0 0 chr5 193476919 193476974 -6153176 + L1ME4a LINE L1 5290 5344 -836 1442 273 60 30 chr5 193477769 193478340 -6151810 + L1ME4a LINE L1 5483 6070 -51 850 211 16 46 chr5 193478397 193478591 -6151559 - MER20 DNA MER1_type -31 188 1 545 266 70 59 chr5 193479116 193479170 -6150980 - MIR SINE MIR -3 259 207 2283 94 0 0 chr5 193479170 193479469 -6150681 - AluSg SINE Alu -11 299 1 545 266 70 59 chr5 193479469 193479670 -6150480 - MIR SINE MIR -55 207 1 433 178 33 33 chr5 193479801 193479891 -6150259 - MIR SINE MIR -56 206 117 212 305 0 0 chr5 193480554 193480613 -6149537 + GA-rich Low_complexity Low_complexity 3 61 0 2217 51 41 3 chr5 193480650 193480943 -6149207 + AluY SINE Alu 1 304 -7 703 160 187 18 chr5 193481731 193481956 -6148194 - L1ME3A LINE L1 -219 5951 5689 638 278 198 27 chr5 193481962 193482447 -6147703 - L1MEd LINE L1 -3783 2450 1905 1324 176 139 15 chr5 193482549 193482879 -6147271 - L1MB7 LINE L1 0 6184 5814 12025 182 39 52 chr5 193482887 193486289 -6143861 - L1MC1 LINE L1 -6 6607 3164 1643 166 14 7 chr5 193486289 193486567 -6143583 + AluJb SINE Alu 1 280 -32 12025 182 39 52 chr5 193486567 193489152 -6140998 - L1MC1 LINE L1 -3449 3164 548 306 0 0 0 chr5 193489152 193489186 -6140964 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1945 115 4 0 chr5 193489186 193489456 -6140694 - AluSq SINE Alu -42 271 1 12025 182 39 52 chr5 193489456 193489684 -6140466 - L1MC1 LINE L1 -6064 549 320 2142 137 9 9 chr5 193489684 193490021 -6140129 - MER1B DNA MER1_type 0 337 1 12025 182 39 52 chr5 193490021 193490477 -6139673 - L1MC1 LINE L1 -6293 320 20 3083 156 35 0 chr5 193490479 193491173 -6138977 - L1MB7 LINE L1 -357 5827 5107 695 263 150 25 chr5 193491171 193492025 -6138125 - L1MEd LINE L1 -4616 1780 792 * 365 292 12 87 chr5 193492564 193492605 -6137545 - MIR SINE MIR -60 202 160 1317 184 57 86 chr5 193492605 193493061 -6137089 + LTR56 LTR ERV1 1 443 -2 365 292 12 87 chr5 193493061 193493180 -6136970 - MIR SINE MIR -102 160 54 250 209 0 0 chr5 193493634 193493677 -6136473 - MIR SINE MIR -3 259 217 228 86 0 0 chr5 193493694 193493729 -6136421 + (CA)n Simple_repeat Simple_repeat 2 36 0 230 218 256 0 chr5 193493762 193493840 -6136310 + MIR SINE MIR 71 168 -94 256 300 22 11 chr5 193493867 193493957 -6136193 - MIR SINE MIR -98 164 74 253 330 195 15 chr5 193493956 193494223 -6135927 - L2 LINE L2 -12 3260 2946 * 392 275 39 51 chr5 193494572 193494750 -6135400 + MIR SINE MIR 47 222 -40 900 291 132 24 chr5 193494847 193495273 -6134877 + L2 LINE L2 2225 2696 -618 1427 213 181 21 chr5 193495273 193495705 -6134445 - MLT1D LTR MaLR 0 505 5 1219 272 93 14 chr5 193495705 193496274 -6133876 + L2 LINE L2 2700 3313 0 498 225 8 33 chr5 193496512 193496632 -6133518 - MIR SINE MIR -29 233 117 195 42 0 0 chr5 193497602 193497626 -6132524 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 442 293 91 41 chr5 193497790 193498032 -6132118 - MIR SINE MIR -1 261 8 1263 197 56 64 chr5 193498231 193498622 -6131528 + MLT1B LTR MaLR 3 390 0 979 133 6 0 chr5 193498694 193498860 -6131290 + L1MA4 LINE L1 6130 6296 -4 608 286 73 26 chr5 193499794 193500028 -6130122 - MIR SINE MIR -17 245 1 1131 197 12 49 chr5 193500037 193500281 -6129869 - MIR SINE MIR 0 262 28 258 239 101 73 chr5 193500330 193500439 -6129711 - MIR SINE MIR -137 125 14 262 290 19 47 chr5 193500442 193500549 -6129601 - MIR SINE MIR 0 262 159 548 325 133 12 chr5 193500553 193500885 -6129265 - MLT1I LTR MaLR 0 409 38 305 347 26 19 chr5 193501082 193501254 -6128896 - MIR SINE MIR -59 149 23 304 309 0 0 chr5 193501504 193501585 -6128565 - MIR SINE MIR -70 192 112 600 223 175 0 chr5 193501771 193501937 -6128213 + MIR SINE MIR 57 251 -11 451 108 0 0 chr5 193502158 193502232 -6127918 - L1MA8 LINE L1 -4 6287 6214 814 110 3 2 chr5 193502270 193502396 -6127754 - MLT1A1 LTR MaLR 0 365 254 376 261 43 17 chr5 193502397 193502512 -6127638 + MIR SINE MIR 67 184 -78 236 250 40 0 chr5 193502515 193502591 -6127559 - L1ME LINE L1 -473 5648 5570 1334 159 25 12 chr5 193502663 193502908 -6127242 - MLT1A1 LTR MaLR -117 248 1 526 266 70 0 chr5 193503042 193503200 -6126950 - MIR SINE MIR -89 173 5 3771 200 26 33 chr5 193503278 193503897 -6126253 + L1ME1 LINE L1 4230 4841 -1305 2250 129 3 0 chr5 193503897 193504206 -6125944 - AluSx SINE Alu -2 310 1 3771 200 26 33 chr5 193504206 193504554 -6125596 + L1ME1 LINE L1 4841 5190 -956 1492 143 136 0 chr5 193504556 193504807 -6125343 + AluJb SINE Alu 21 305 -7 3331 182 89 31 chr5 193504829 193505491 -6124659 + L1ME1 LINE L1 5175 5907 -259 2105 145 0 16 chr5 193505491 193505808 -6124342 + AluSx SINE Alu 1 312 0 3331 182 89 31 chr5 193505808 193506080 -6124070 + L1ME1 LINE L1 5907 6162 -4 243 181 374 36 chr5 193506115 193506198 -6123952 - L2 LINE L2 -3 3310 3200 1096 190 97 10 chr5 193506457 193506747 -6123403 - MER45B DNA AcHobo -11 1029 715 374 127 14 0 chr5 193506822 193506893 -6123257 + (CA)n Simple_repeat Simple_repeat 2 73 0 1721 263 121 47 chr5 193506934 193507661 -6122489 - MER45C DNA AcHobo -172 781 1 330 334 112 34 chr5 193507729 193508052 -6122098 - L2 LINE L2 -37 3235 2888 405 0 0 0 chr5 193508641 193508686 -6121464 + (CA)n Simple_repeat Simple_repeat 2 46 0 484 270 88 14 chr5 193509726 193509941 -6120209 + MIR SINE MIR 2 232 -30 382 114 143 0 chr5 193509997 193510067 -6120083 - MER116 DNA Mariner 0 80 1 508 267 7 40 chr5 193510165 193510315 -6119835 - MIR SINE MIR -116 146 2 324 331 32 24 chr5 193511043 193511167 -6118983 - MIR SINE MIR -47 215 91 418 307 63 13 chr5 193511293 193511531 -6118619 - L1ME4a LINE L1 -196 5925 5676 732 213 185 5 chr5 193511690 193511901 -6118249 - MIR SINE MIR 0 262 14 1843 211 69 13 chr5 193511905 193512383 -6117767 - Charlie4a DNA MER1_type -1 507 3 188 342 61 18 chr5 193512520 193512634 -6117516 + L2 LINE L2 3153 3271 -1 355 227 27 0 chr5 193512892 193512967 -6117183 + MIR SINE MIR 85 161 -101 311 234 65 24 chr5 193513280 193513404 -6116746 + LTR67 LTR ERVL 428 556 -1 283 231 132 11 chr5 193513406 193513497 -6116653 + MIR SINE MIR 158 259 -3 1895 134 0 4 chr5 193514202 193514471 -6115679 - AluJo SINE Alu -44 268 1 551 201 208 7 chr5 193514524 193514678 -6115472 + MER53 DNA DNA 5 189 0 210 241 205 0 chr5 193515187 193515263 -6114887 - MIR SINE MIR -89 119 28 302 189 11 105 chr5 193516079 193516174 -6113976 - L1ME4a LINE L1 0 6121 6036 316 315 18 9 chr5 193516324 193516435 -6113715 - L1ME4a LINE L1 -1993 5815 5704 841 190 81 0 chr5 193516479 193516652 -6113498 - MIR SINE MIR -57 205 14 713 115 0 10 chr5 193517315 193517419 -6112731 - AluSg/x SINE Alu -16 296 194 222 158 0 0 chr5 193517454 193517492 -6112658 - MIR SINE MIR -94 168 131 206 344 201 7 chr5 193517654 193517808 -6112342 - MIR SINE MIR -77 185 2 218 333 13 0 chr5 193518225 193518303 -6111847 - MIR SINE MIR -59 149 71 249 310 35 9 chr5 193518352 193518465 -6111685 + MIR SINE MIR 57 172 -90 499 300 100 16 chr5 193518465 193518715 -6111435 + L1ME LINE L1 5255 5525 -641 836 162 5 27 chr5 193519013 193519198 -6110952 + L1MB8 LINE L1 5998 6178 0 881 157 65 22 chr5 193520342 193520527 -6109623 + MER20 DNA MER1_type 27 219 0 209 268 71 0 chr5 193520548 193520604 -6109546 - MIR SINE MIR -68 140 81 216 257 297 0 chr5 193521101 193521202 -6108948 - MIR SINE MIR -91 171 41 317 283 66 9 chr5 193521436 193521542 -6108608 + MIR SINE MIR 34 145 -63 186 333 56 0 chr5 193522516 193522588 -6107562 + MIR3 SINE MIR 112 187 -21 376 327 10 20 chr5 193522938 193523137 -6107013 + G-rich Low_complexity Low_complexity 1 197 0 1333 216 42 33 chr5 193524605 193524996 -6105154 - MLT1C LTR MaLR 0 467 79 2429 96 0 0 chr5 193525021 193525333 -6104817 - AluSx SINE Alu 0 312 1 458 195 19 8 chr5 193525517 193525638 -6104512 - MIR SINE MIR -43 165 41 197 325 26 0 chr5 193525929 193526006 -6104144 - L2 LINE L2 -535 2779 2701 2190 135 3 0 chr5 193526007 193526318 -6103832 - AluSx SINE Alu 0 312 1 902 268 180 9 chr5 193526344 193526811 -6103339 + L1MC4 LINE L1 7496 8042 0 291 301 26 21 chr5 193526822 193527015 -6103135 - L2 LINE L2 -627 2687 2494 1722 111 28 35 chr5 193527017 193527306 -6102844 + L1MA1 LINE L1 6006 6292 -10 823 267 20 0 chr5 193527612 193527807 -6102343 - MIR SINE MIR -13 249 51 329 329 101 21 chr5 193528225 193528445 -6101705 - MIR SINE MIR -3 259 24 231 284 30 0 chr5 193528945 193529012 -6101138 - MLT1J2 LTR MaLR -3 447 379 2452 76 7 0 chr5 193529102 193529404 -6100746 + AluSc SINE Alu 1 304 -5 407 295 98 34 chr5 193529555 193529850 -6100300 - MLT1J2 LTR MaLR -71 379 66 438 224 41 0 chr5 193530247 193530345 -6099805 + L1MD1 LINE L1 6122 6223 -19 2161 111 0 7 chr5 193530369 193530650 -6099500 + AluSg SINE Alu 1 281 -29 198 0 0 0 chr5 193530650 193530672 -6099478 + (CA)n Simple_repeat Simple_repeat 1 22 0 240 338 179 30 chr5 193530889 193531292 -6098858 + L2 LINE L2 2807 3269 -3 180 97 0 0 chr5 193531304 193531335 -6098815 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 604 268 117 13 chr5 193531514 193531745 -6098405 + MIR SINE MIR 2 256 -6 245 223 126 19 chr5 193532042 193532145 -6098005 - MIR SINE MIR -12 250 137 265 296 103 39 chr5 193532230 193532333 -6097817 - L1MC4a LINE L1 -1763 6045 5950 2000 164 0 0 chr5 193532333 193532626 -6097524 + AluJo SINE Alu 1 293 -19 265 296 103 39 chr5 193532626 193532725 -6097425 - L1MC4a LINE L1 -1858 5950 5830 359 292 36 15 chr5 193532757 193532894 -6097256 - MIR3 SINE MIR -66 142 3 1678 174 10 31 chr5 193532918 193533206 -6096944 - AluJo SINE Alu -30 282 1 494 237 26 0 chr5 193533414 193533528 -6096622 + MIR SINE MIR 33 149 -113 1567 179 7 20 chr5 193533532 193533833 -6096317 - MLT2C1 LTR ERVL 0 397 101 500 171 0 12 chr5 193533833 193533915 -6096235 - FRAM SINE Alu -37 139 59 259 182 121 0 chr5 193533915 193533981 -6096169 - MLT2C1 LTR ERVL -390 74 1 27 0 0 0 chr5 193534365 193534392 -6095758 + AT_rich Low_complexity Low_complexity 1 27 0 2089 109 14 14 chr5 193534400 193534694 -6095456 + AluSg SINE Alu 5 298 -12 298 254 260 40 chr5 193534916 193535089 -6095061 - MIR SINE MIR -21 241 31 186 329 89 0 chr5 193535295 193535374 -6094776 - MIR SINE MIR -60 202 117 270 224 13 26 chr5 193535446 193535522 -6094628 - MLT1L LTR MaLR -536 79 5 220 279 59 0 chr5 193535528 193535596 -6094554 - MIR SINE MIR -141 121 50 279 302 19 9 chr5 193536288 193536394 -6093756 + MIR SINE MIR 61 167 -95 * 413 226 65 71 chr5 193536378 193536453 -6093697 - MIR SINE MIR -59 203 129 2798 91 8 0 chr5 193536453 193536814 -6093336 - THE1B LTR MaLR 0 364 1 413 226 65 71 chr5 193536814 193536893 -6093257 - MIR SINE MIR -133 129 50 317 274 95 0 chr5 193537006 193537101 -6093049 + MIR SINE MIR 93 196 -66 456 236 14 7 chr5 193537175 193537315 -6092835 + MER113 DNA MER1_type? 89 229 -292 183 397 0 13 chr5 193537847 193537925 -6092225 + MIR SINE MIR 47 123 -139 274 306 132 46 chr5 193538085 193538366 -6091784 + L2 LINE L2 2950 3254 -18 2269 109 0 22 chr5 193538479 193538799 -6091351 - AluSq SINE Alu 0 313 1 283 311 30 41 chr5 193538847 193539029 -6091121 - MIR SINE MIR -56 206 30 469 121 15 0 chr5 193539035 193539101 -6091049 - FRAM/FAM SINE Alu -90 86 20 265 54 0 0 chr5 193539354 193539391 -6090759 + tRNA-Cys-TGC tRNA tRNA 1 37 -38 1137 95 14 0 chr5 193540140 193540287 -6089863 + AluSg/x SINE Alu 135 283 -27 855 183 55 6 chr5 193540363 193540527 -6089623 - MER5A DNA MER1_type 0 189 18 225 0 0 0 chr5 193540527 193540552 -6089598 + (CA)n Simple_repeat Simple_repeat 2 26 0 300 247 91 38 chr5 193540614 193540691 -6089459 - L1ME4a LINE L1 -196 5925 5854 1963 157 0 35 chr5 193540691 193541010 -6089140 - AluSx SINE Alu -4 308 1 300 247 91 38 chr5 193541010 193541118 -6089032 - L1ME4a LINE L1 -267 5854 5730 217 281 16 16 chr5 193541493 193541557 -6088593 - L2 LINE L2 -9 3263 3200 2316 94 7 3 chr5 193541806 193542114 -6088036 - AluSc SINE Alu 0 309 1 2277 143 36 25 chr5 193542307 193542746 -6087404 - L1MB3 LINE L1 -4 6179 5736 470 294 26 14 chr5 193544057 193544211 -6085939 + MIR SINE MIR 39 192 -68 458 199 146 81 chr5 193544346 193544589 -6085561 - MER113 DNA MER1_type? -75 446 176 1901 142 10 0 chr5 193544589 193544884 -6085266 - AluJb SINE Alu 0 312 15 458 199 146 81 chr5 193544884 193544961 -6085189 - MER113 DNA MER1_type? -345 176 105 246 154 0 0 chr5 193544968 193545007 -6085143 + tRNA-Met-e tRNA tRNA 6 44 -31 238 196 131 28 chr5 193545007 193545114 -6085036 - MER113 DNA MER1_type? -402 119 2 684 250 132 47 chr5 193545726 193546150 -6084000 - L1ME4a LINE L1 -951 5195 4736 2328 126 0 0 chr5 193547015 193547324 -6082826 - AluSg SINE Alu -1 309 1 228 271 0 0 chr5 193547428 193547476 -6082674 + MIR SINE MIR 105 152 -110 1181 173 62 36 chr5 193547487 193547712 -6082438 + AluJb SINE Alu 69 299 -13 895 121 0 8 chr5 193547862 193547986 -6082164 - FLAM_C SINE Alu -18 125 3 1458 217 8 19 chr5 193547998 193548366 -6081784 - L1MB7 LINE L1 -9 6175 5812 799 199 7 7 chr5 193548366 193548512 -6081638 - FRAM SINE Alu -24 152 7 1925 204 77 25 chr5 193548526 193548786 -6081364 - L1MB7 LINE L1 -365 5819 5574 414 0 0 0 chr5 193548786 193548832 -6081318 + (TG)n Simple_repeat Simple_repeat 1 46 0 2300 75 4 0 chr5 193548832 193549111 -6081039 - AluSp SINE Alu -33 280 1 1925 204 77 25 chr5 193549111 193549434 -6080716 - L1MB7 LINE L1 -610 5574 5269 2032 141 3 26 chr5 193549434 193549740 -6080410 - AluSx SINE Alu -13 299 1 1925 204 77 25 chr5 193549740 193549994 -6080156 - L1MB7 LINE L1 -915 5269 4945 1590 159 84 21 chr5 193550040 193550416 -6079734 + MLT1B LTR MaLR 1 390 0 2244 102 0 40 chr5 193550460 193550784 -6079366 + AluSx SINE Alu 1 311 -1 3360 210 36 12 chr5 193550785 193551608 -6078542 - L1MB7 LINE L1 -1243 4903 4061 247 233 44 78 chr5 193551833 193551920 -6078230 + L1ME4a LINE L1 5748 5836 -285 2172 122 3 3 chr5 193551920 193552215 -6077935 - AluSx SINE Alu -17 295 1 247 233 44 78 chr5 193552215 193552333 -6077817 + L1ME4a LINE L1 5836 5946 -175 190 244 24 98 chr5 193552881 193552963 -6077187 + L3 LINE CR1 1492 1567 -10 1926 124 0 80 chr5 193554045 193554359 -6075791 + AluSx SINE Alu 5 293 -19 2253 118 20 0 chr5 193554635 193554931 -6075219 + AluSq SINE Alu 1 302 -11 4238 105 22 29 chr5 193554959 193555652 -6074498 + MER11C LTR ERVK 384 1071 0 491 46 0 15 chr5 193555652 193555717 -6074433 + HERVK11 LTR ERVK 1 64 -7889 * 13269 59 8 0 chr5 193555712 193557412 -6072738 + HERVK11 LTR ERVK 2888 4601 -3352 9067 55 6 0 chr5 193557410 193558594 -6071556 + HERVK11 LTR ERVK 5525 6767 -1186 * 8124 47 1 0 chr5 193558579 193559575 -6070575 + HERVK11 LTR ERVK 6957 7953 0 * 6462 113 25 27 chr5 193559575 193560648 -6069502 + MER11C LTR ERVK 1 1071 0 296 234 65 0 chr5 193560654 193560731 -6069419 + MIR SINE MIR 88 169 -93 269 291 85 14 chr5 193562015 193562156 -6067994 - MER91A DNA MER1_type -45 151 1 279 262 76 0 chr5 193562167 193562316 -6067834 + MIR SINE MIR 79 241 -21 400 279 29 0 chr5 193562635 193562739 -6067411 - MIR SINE MIR -109 153 47 2101 215 46 11 chr5 193562739 193563278 -6066872 + MER74A LTR ERVL 1 558 0 216 336 45 9 chr5 193563638 193563748 -6066402 - MIR SINE MIR -61 147 34 1972 144 7 16 chr5 193563981 193564287 -6065863 + AluSx SINE Alu 1 303 -9 257 288 219 30 chr5 193565065 193565593 -6064557 + L2 LINE L2 2624 3260 -12 323 320 199 0 chr5 193565672 193565828 -6064322 - MIR3 SINE MIR -10 198 12 491 241 0 17 chr5 193565895 193566011 -6064139 - MIR SINE MIR -74 134 21 398 285 5 121 chr5 193566296 193566503 -6063647 + L1ME LINE L1 5279 5461 -713 402 288 140 9 chr5 193566516 193566745 -6063405 - MER102b DNA MER1_type 0 341 83 362 366 6 0 chr5 193566769 193566933 -6063217 + L1ME LINE L1 5655 5819 -302 1852 170 3 7 chr5 193567321 193567645 -6062505 - AluJb SINE Alu 0 323 1 2954 221 35 0 chr5 193568489 193569113 -6061037 + MER82 DNA MER2_type 8 653 0 1054 159 0 0 chr5 193569207 193569370 -6060780 - MER20 DNA MER1_type -15 204 42 270 303 71 39 chr5 193569380 193569535 -6060615 + L1ME4a LINE L1 5765 5924 -197 433 358 80 5 chr5 193570144 193570331 -6059819 + MIR SINE MIR 26 226 -36 634 210 28 0 chr5 193570358 193570501 -6059649 + L1MB4 LINE L1 6028 6174 -6 216 135 0 0 chr5 193570504 193570541 -6059609 + (CAGT)n Simple_repeat Simple_repeat 4 40 0 371 236 149 81 chr5 193571075 193571223 -6058927 + MER115 DNA AcHobo 136 293 -400 363 316 60 0 chr5 193572351 193572484 -6057666 + MIR SINE MIR 47 187 -75 384 284 74 58 chr5 193572653 193572843 -6057307 + L1ME4a LINE L1 5896 6088 -33 1590 231 42 13 chr5 193572856 193573310 -6056840 + MLT1C LTR MaLR 1 467 0 708 309 13 30 chr5 193574933 193575169 -6054981 - MIR SINE MIR -13 249 18 557 246 16 0 chr5 193575310 193575436 -6054714 + L2 LINE L2 3186 3313 0 22 0 0 0 chr5 193576539 193576561 -6053589 + AT_rich Low_complexity Low_complexity 1 22 0 1977 170 0 0 chr5 193577213 193577525 -6052625 + AluJb SINE Alu 1 312 0 235 310 91 75 chr5 193577935 193578562 -6051588 - L2 LINE L2 -38 3234 2600 2373 99 0 0 chr5 193579768 193580061 -6050089 + AluSc SINE Alu 1 293 -16 611 259 35 0 chr5 193580704 193580847 -6049303 + MIR SINE MIR 78 225 -37 2367 113 3 0 chr5 193580994 193581305 -6048845 - AluSq SINE Alu -1 312 1 2166 34 0 0 chr5 193581562 193581799 -6048351 - AluY SINE Alu 0 311 75 411 285 109 6 chr5 193582526 193582691 -6047459 - MIR SINE MIR -79 183 2 287 333 16 8 chr5 193582921 193583047 -6047103 + MIR SINE MIR 26 152 -56 285 301 12 0 chr5 193583124 193583207 -6046943 + CT-rich Low_complexity Low_complexity 2 85 0 205 95 24 24 chr5 193583551 193583593 -6046557 + (GAAA)n Simple_repeat Simple_repeat 2 43 0 207 235 0 0 chr5 193583900 193583951 -6046199 + GA-rich Low_complexity Low_complexity 4 54 0 928 103 0 27 chr5 193583951 193584135 -6046015 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 598 257 175 40 chr5 193584646 193585023 -6045127 + MLT1K LTR MaLR 161 588 0 282 332 71 20 chr5 193585099 193585295 -6044855 - MIR SINE MIR -22 240 35 23 0 0 0 chr5 193585967 193585990 -6044160 + AT_rich Low_complexity Low_complexity 1 23 0 497 229 41 8 chr5 193586056 193586178 -6043972 + MIR SINE MIR 84 209 -53 542 268 20 0 chr5 193586252 193586405 -6043745 - MIR SINE MIR -55 207 52 203 368 32 11 chr5 193586411 193586506 -6043644 + MIR SINE MIR 14 110 -152 274 314 0 0 chr5 193586740 193586826 -6043324 + MIR SINE MIR 97 182 -80 1326 78 0 0 chr5 193587304 193587484 -6042666 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 428 196 7 33 chr5 193587488 193587641 -6042509 + CT-rich Low_complexity Low_complexity 4 152 0 186 171 0 0 chr5 193587747 193587788 -6042362 + CT-rich Low_complexity Low_complexity 3 43 0 201 74 0 0 chr5 193588366 193588393 -6041757 + (CGGGG)n Simple_repeat Simple_repeat 1 27 0 184 309 12 12 chr5 193588638 193588722 -6041428 + MIR3 SINE MIR 102 185 -23 266 193 169 12 chr5 193588897 193588980 -6041170 + MIR SINE MIR 34 129 -79 495 193 53 21 chr5 193589016 193589221 -6040929 + ORSL DNA AcHobo 1 245 -30 305 256 176 40 chr5 193589506 193589631 -6040519 - MIR SINE MIR -13 249 108 215 244 21 44 chr5 193589703 193589875 -6040275 + L2 LINE L2 2920 3055 -217 181 286 0 20 chr5 193589934 193589983 -6040167 - L2 LINE L2 0 3313 3266 954 233 107 25 chr5 193590310 193590713 -6039437 + L2 LINE L2 2877 3312 -1 220 191 44 0 chr5 193590714 193590782 -6039368 + GA-rich Low_complexity Low_complexity 3 73 0 257 234 75 19 chr5 193590849 193590956 -6039194 - LTR33 LTR ERVL -67 454 342 487 283 60 16 chr5 193591502 193591686 -6038464 - MIR SINE MIR -20 242 51 324 0 0 0 chr5 193591758 193591794 -6038356 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 714 309 11 2 chr5 193591811 193592041 -6038109 - MIR SINE MIR 0 262 34 1960 208 42 11 chr5 193592447 193592894 -6037256 + MLT1C LTR MaLR 1 461 -6 298 248 261 7 chr5 193593092 193593245 -6036905 - MIR SINE MIR -70 192 1 461 290 30 24 chr5 193593628 193593797 -6036353 + MIR SINE MIR 48 217 -45 245 267 53 13 chr5 193593808 193593883 -6036267 + MIR SINE MIR 126 203 -59 214 233 23 0 chr5 193595284 193595327 -6034823 + L2 LINE L2 3256 3299 -14 * 860 313 46 19 chr5 193595322 193595801 -6034349 + L2 LINE L2 2811 3302 -11 270 370 19 0 chr5 193596119 193596227 -6033923 + L1MC4a LINE L1 5504 5613 -2195 469 133 44 11 chr5 193596240 193596330 -6033820 + MLT1H LTR MaLR 12 104 -445 699 200 29 7 chr5 193596331 193596471 -6033679 + AluJo SINE Alu 85 227 -85 1383 243 71 37 chr5 193596471 193596907 -6033243 + MLT1H LTR MaLR 99 549 0 644 297 51 17 chr5 193596919 193597212 -6032938 + L1MC4a LINE L1 5627 5929 -1879 1876 178 3 10 chr5 193597278 193597582 -6032568 + AluJb SINE Alu 1 302 -10 1527 205 117 41 chr5 193597868 193598287 -6031863 + L1ME3 LINE L1 5374 5824 -342 1198 135 0 6 chr5 193598289 193598459 -6031691 + AluSx SINE Alu 1 169 -143 1489 87 0 0 chr5 193598459 193598644 -6031506 + AluSg/x SINE Alu 116 300 -12 704 307 45 21 chr5 193598644 193598976 -6031174 + L1ME3 LINE L1 5819 6158 -4 184 274 0 0 chr5 193599496 193599547 -6030603 - MIR SINE MIR -102 160 110 240 165 291 13 chr5 193600214 193600293 -6029857 + MIR SINE MIR 81 181 -81 209 307 99 0 chr5 193600319 193600420 -6029730 + L2 LINE L2 2935 3045 -268 281 333 0 0 chr5 193600523 193600613 -6029537 + MIR SINE MIR 159 248 -14 483 264 179 18 chr5 193601469 193601742 -6028408 + L2 LINE L2 2995 3311 -2 312 232 168 0 chr5 193601846 193601941 -6028209 - MIR SINE MIR -139 123 13 2118 72 79 0 chr5 193602181 193602459 -6027691 + AluSc SINE Alu 1 300 -9 360 351 43 16 chr5 193602474 193602641 -6027509 - MIR SINE MIR -3 259 85 3468 51 23 0 chr5 193602641 193603075 -6027075 - MLT2A1 LTR ERVL 0 444 1 360 351 43 16 chr5 193603075 193603095 -6027055 - MIR SINE MIR -177 85 67 180 356 68 68 chr5 193603113 193603304 -6026846 + L2 LINE L2 3082 3272 0 226 296 185 0 chr5 193603429 193603537 -6026613 + MER5A DNA MER1_type 55 182 -7 319 230 52 48 chr5 193604177 193604302 -6025848 - MIR SINE MIR -62 146 40 478 345 71 0 chr5 193604373 193604599 -6025551 - MIR SINE MIR 0 262 21 180 302 16 0 chr5 193604654 193604717 -6025433 + L2 LINE L2 2650 2713 -601 2436 81 0 3 chr5 193604718 193605014 -6025136 + AluSq SINE Alu 1 295 -18 845 141 18 6 chr5 193605114 193605277 -6024873 + L1MA5A LINE L1 6128 6292 -5 25 31 0 0 chr5 193605277 193605309 -6024841 + AT_rich Low_complexity Low_complexity 1 32 0 2221 93 52 0 chr5 193605327 193605616 -6024534 + AluSq SINE Alu 1 304 -9 1381 157 4 17 chr5 193605668 193605898 -6024252 + AluJb SINE Alu 86 312 0 312 216 45 0 chr5 193605901 193605989 -6024161 + L1 LINE L1 3179 3270 -2876 200 321 25 0 chr5 193606284 193606365 -6023785 + MIR SINE MIR 159 241 -21 739 276 131 10 chr5 193606672 193606962 -6023188 - MLT1I LTR MaLR -84 325 1 186 327 133 18 chr5 193606969 193607082 -6023068 - MIR SINE MIR -74 188 63 279 73 0 0 chr5 193608018 193608059 -6022091 + MER85 DNA T2_type 1 41 -98 296 225 58 42 chr5 193608297 193608417 -6021733 + MIR SINE MIR 61 182 -80 2254 105 0 29 chr5 193608489 193608802 -6021348 + AluSx SINE Alu 1 304 -8 204 333 33 0 chr5 193608832 193608922 -6021228 - L3 LINE CR1 -307 1270 1178 890 219 75 0 chr5 193609028 193609304 -6020846 + L2 LINE L2 2782 3074 -239 383 248 91 100 chr5 193609438 193609648 -6020502 + L2 LINE L2 3090 3297 -16 282 289 33 11 chr5 193609682 193609772 -6020378 + MIR SINE MIR 58 149 -113 460 270 81 11 chr5 193610437 193610611 -6019539 - MIR SINE MIR -11 251 66 326 261 108 9 chr5 193610899 193611010 -6019140 + MIR3 SINE MIR 33 154 -54 2341 106 3 0 chr5 193611068 193611380 -6018770 - AluSq SINE Alu 0 313 1 228 364 78 20 chr5 193611606 193611900 -6018250 + MLT1K LTR MaLR 120 430 -158 2290 109 119 8 chr5 193611984 193612369 -6017781 + MSTA LTR MaLR 1 428 0 308 216 0 27 chr5 193613330 193613404 -6016746 + L1ME4a LINE L1 5953 6024 -97 418 309 103 6 chr5 193614223 193614388 -6015762 - L1MC4a LINE L1 -1863 5945 5765 48 18 0 0 chr5 193614403 193614458 -6015692 + AT_rich Low_complexity Low_complexity 1 55 0 315 228 109 11 chr5 193614543 193614635 -6015515 + MIR3 SINE MIR 102 202 -6 458 249 124 14 chr5 193615213 193615382 -6014768 - MIR SINE MIR -61 147 15 302 273 0 0 chr5 193615506 193615583 -6014567 + L2 LINE L2 2911 2987 -285 324 224 178 37 chr5 193615693 193615800 -6014350 - L2 LINE L2 0 3272 3151 189 256 0 0 chr5 193615813 193615856 -6014294 + L2 LINE L2 3210 3252 -20 180 350 120 0 chr5 193616151 193616268 -6013882 - L2 LINE L2 -1 3271 3141 544 212 0 27 chr5 193616309 193616768 -6013382 + (CA)n Simple_repeat Simple_repeat 1 446 0 417 251 0 20 chr5 193616779 193617031 -6013119 + (CA)n Simple_repeat Simple_repeat 1 246 0 1426 245 175 11 chr5 193617177 193617200 -6012950 + MLT1L LTR MaLR 4 22 -593 1131 257 117 45 chr5 193617200 193617706 -6012444 - MLT1F LTR MaLR 0 542 1 1426 245 175 11 chr5 193617706 193618062 -6012088 + MLT1L LTR MaLR 22 318 -297 2226 113 3 3 chr5 193618062 193618364 -6011786 + AluSx SINE Alu 1 302 -10 1426 245 175 11 chr5 193618364 193618509 -6011641 + MLT1L LTR MaLR 318 615 0 378 258 70 47 chr5 193618509 193618765 -6011385 - L2 LINE L2 -196 3076 2815 337 267 60 0 chr5 193619068 193619184 -6010966 + L2 LINE L2 2709 2831 -483 261 0 0 0 chr5 193619477 193619506 -6010644 + (ATG)n Simple_repeat Simple_repeat 2 30 0 494 271 46 13 chr5 193619638 193619789 -6010361 + MIR SINE MIR 20 175 -87 3444 119 6 37 chr5 193619899 193620445 -6009705 - MER1A DNA MER1_type 0 529 1 247 254 51 34 chr5 193620480 193620598 -6009552 + L1MC5 LINE L1 7806 7925 -36 1878 154 3 36 chr5 193620606 193620912 -6009238 + AluJo SINE Alu 1 296 -16 1004 200 0 0 chr5 193620922 193621097 -6009053 + FAM SINE Alu 1 175 0 546 222 37 53 chr5 193621097 193621278 -6008872 - MIR SINE MIR -68 194 15 330 175 63 0 chr5 193621691 193621776 -6008374 + MIR SINE MIR 31 122 -86 580 303 34 19 chr5 193622062 193622270 -6007880 - MIR SINE MIR -32 230 20 2196 109 30 3 chr5 193622279 193622614 -6007536 - AluSx SINE Alu 0 343 1 233 133 183 33 chr5 193622745 193622805 -6007345 - L1MD2 LINE L1 -248 6111 6043 482 309 52 57 chr5 193623114 193623483 -6006667 - L2 LINE L2 -20 3252 2886 345 283 44 0 chr5 193624978 193625091 -6005059 + MIR3 SINE MIR 45 162 -46 330 200 12 62 chr5 193625496 193625576 -6004574 + MIR3 SINE MIR 84 159 -49 1556 186 25 18 chr5 193625847 193626146 -6004004 + AluJo SINE Alu 1 301 0 620 222 94 34 chr5 193626218 193626484 -6003666 + MER113 DNA MER1_type? 33 314 -207 2215 126 0 3 chr5 193626487 193626788 -6003362 + AluSx SINE Alu 2 301 -11 1428 136 0 4 chr5 193627296 193627539 -6002611 - L1MA4A LINE L1 0 6303 6062 249 241 80 9 chr5 193628094 193628206 -6001944 - L1ME4a LINE L1 -1 6120 6001 1774 146 29 37 chr5 193628221 193628570 -6001580 - MER7A DNA MER2_type -2 344 1 1873 136 39 14 chr5 193628645 193628931 -6001219 - AluSq SINE Alu -20 293 1 2733 192 70 27 chr5 193628931 193629376 -6000774 - MER82 DNA MER2_type -1 652 171 2150 102 13 42 chr5 193629376 193629689 -6000461 - AluSx SINE Alu -8 304 1 2733 192 70 27 chr5 193629689 193629868 -6000282 - MER82 DNA MER2_type -482 171 1 226 203 0 47 chr5 193630319 193630383 -5999767 - MLT1K LTR MaLR -343 245 185 2353 108 0 0 chr5 193630406 193630713 -5999437 + AluSx SINE Alu 3 309 -3 563 294 33 19 chr5 193631398 193631612 -5998538 - MIR SINE MIR -14 248 32 206 247 108 32 chr5 193631747 193631840 -5998310 + MIR SINE MIR 47 146 -116 339 298 4 118 chr5 193632449 193632694 -5997456 - L2 LINE L2 -47 3225 3009 352 275 80 0 chr5 193632698 193632836 -5997314 - L1MC5 LINE L1 -519 7442 7294 * 417 290 135 19 chr5 193632814 193633073 -5997077 - L1MC4 LINE L1 -556 7486 7198 * 993 241 47 5 chr5 193633061 193633383 -5996767 - L1MC4 LINE L1 -668 5574 5239 2429 81 0 3 chr5 193633495 193633791 -5996359 + AluSg1 SINE Alu 1 295 -14 2086 156 35 8 chr5 193633791 193633920 -5996230 - L1MB3 LINE L1 -6 6165 6041 1809 178 3 20 chr5 193633920 193634224 -5995926 + AluJo SINE Alu 1 299 -13 2086 156 35 8 chr5 193634224 193634521 -5995629 - L1MB3 LINE L1 -130 6041 5699 520 203 124 45 chr5 193634598 193634775 -5995375 - MLT1K LTR MaLR -7 581 391 271 280 117 48 chr5 193634842 193635073 -5995077 - MLT1K LTR MaLR -302 286 2 217 365 0 0 chr5 193635626 193635733 -5994417 + MIR3 SINE MIR 89 195 -13 570 296 85 56 chr5 193635739 193636359 -5993791 + L2 LINE L2 2616 3272 0 195 208 21 21 chr5 193636774 193636822 -5993328 - MIR SINE MIR -117 145 98 722 226 133 133 chr5 193637313 193637629 -5992521 - MLT1K LTR MaLR -1 587 269 2089 122 30 0 chr5 193637629 193637925 -5992225 + AluSx SINE Alu 1 305 -7 722 226 133 133 chr5 193637925 193638007 -5992143 - MLT1K LTR MaLR -318 270 189 196 229 129 0 chr5 193638559 193638629 -5991521 - MIR SINE MIR -97 165 87 368 258 129 16 chr5 193638857 193639012 -5991138 - MIR SINE MIR -63 145 18 2440 88 0 0 chr5 193639277 193639572 -5990578 + AluSq SINE Alu 1 295 -18 352 314 111 33 chr5 193639886 193640157 -5989993 + L2 LINE L2 2967 3258 -14 195 42 0 0 chr5 193640158 193640182 -5989968 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 559 277 62 42 chr5 193640504 193640764 -5989386 - MLT1K LTR MaLR -4 584 320 355 298 67 22 chr5 193642355 193642533 -5987617 + MIR SINE MIR 2 187 -75 395 246 106 21 chr5 193643123 193643265 -5986885 + MIR SINE MIR 2 155 -107 617 313 107 0 chr5 193643266 193643499 -5986651 - MIR SINE MIR -3 259 2 1026 218 36 0 chr5 193643659 193643884 -5986266 + L1MB7 LINE L1 5933 6165 -19 270 322 11 11 chr5 193644011 193644101 -5986049 + MIR SINE MIR 2 91 -171 860 253 167 15 chr5 193644101 193644425 -5985725 - MLT1K LTR MaLR 0 588 216 1975 177 0 0 chr5 193644667 193644977 -5985173 + AluJo SINE Alu 3 312 0 24 0 0 0 chr5 193645019 193645043 -5985107 + AT_rich Low_complexity Low_complexity 1 24 0 2400 71 10 3 chr5 193645048 193645343 -5984807 + AluSq SINE Alu 1 297 -16 2034 127 0 3 chr5 193645346 193645629 -5984521 - AluJo SINE Alu -30 282 1 246 293 28 19 chr5 193645771 193645877 -5984273 + MIR SINE MIR 21 127 -135 454 312 185 5 chr5 193646046 193646235 -5983915 - MIR SINE MIR -31 231 9 428 314 97 28 chr5 193646566 193646814 -5983336 - L2 LINE L2 -94 3178 2914 2289 100 40 0 chr5 193647188 193647488 -5982662 - AluSx SINE Alu 0 312 1 234 174 0 0 chr5 193648105 193648151 -5981999 + (TTCA)n Simple_repeat Simple_repeat 2 47 0 346 299 327 5 chr5 193849093 193849307 -5780843 - L2 LINE L2 -22 3291 3009 976 187 0 0 chr5 193849308 193849474 -5780676 + FRAM SINE Alu 1 165 -11 1571 263 111 32 chr5 193849475 193849720 -5780430 - L2 LINE L2 -298 3015 2791 1939 149 7 3 chr5 193849720 193850022 -5780128 + AluSx SINE Alu 1 303 -9 1571 263 111 32 chr5 193850022 193850446 -5779704 - L2 LINE L2 -522 2791 2285 373 234 109 9 chr5 193850438 193850555 -5779595 - MIR3 SINE MIR -52 156 28 * 2376 64 0 3 chr5 193851049 193851345 -5778805 - AluSq SINE Alu -6 307 13 2205 103 3 0 chr5 193851353 193851654 -5778496 - AluSx SINE Alu -6 306 5 1989 73 77 0 chr5 193852229 193852501 -5777649 + AluSx SINE Alu 1 293 -19 970 181 10 10 chr5 193854164 193854357 -5775793 + AluJo SINE Alu 119 311 -1 2164 121 0 0 chr5 193854385 193854691 -5775459 + AluSx SINE Alu 1 306 -6 236 314 41 37 chr5 193854911 193855036 -5775114 - MIR SINE MIR -83 125 2 1989 117 21 7 chr5 193855053 193855343 -5774807 + AluSx SINE Alu 5 298 -14 250 167 21 0 chr5 193855353 193855401 -5774749 + MER57A LTR ERV1 295 343 -60 325 294 184 0 chr5 193855419 193855555 -5774595 - L1ME4a LINE L1 -2 6119 5959 330 324 52 7 chr5 193855717 193855853 -5774297 - L1ME4a LINE L1 -386 5735 5594 222 263 184 0 chr5 193855971 193856047 -5774103 + MIR SINE MIR 33 122 -86 1794 119 0 0 chr5 193856135 193856386 -5773764 - AluSg SINE Alu -59 251 1 2314 85 0 3 chr5 193857076 193857382 -5772768 - AluSx SINE Alu -7 305 1 2225 88 3 3 chr5 193858303 193858609 -5771541 - AluSx SINE Alu -6 306 1 240 294 191 0 chr5 193859982 193860090 -5770060 + MIR SINE MIR 56 187 -21 2126 83 28 0 chr5 193861492 193861780 -5768370 - AluSx SINE Alu -16 296 1 211 304 62 0 chr5 193862117 193862278 -5767872 + (CTACT)n Simple_repeat Simple_repeat 5 175 0 200 314 58 0 chr5 193862304 193862441 -5767709 + (CTACT)n Simple_repeat Simple_repeat 5 149 0 297 269 0 0 chr5 193862509 193862587 -5767563 + MER117 DNA MER1_type 3 80 -117 1785 129 3 60 chr5 193864192 193864317 -5765833 + AluJb SINE Alu 7 138 -174 2081 117 0 7 chr5 193864317 193864616 -5765534 + AluSx SINE Alu 1 297 -15 2147 92 11 0 chr5 193864616 193864900 -5765250 + AluSp SINE Alu 1 287 -26 1785 129 3 60 chr5 193864900 193865090 -5765060 + AluJb SINE Alu 136 305 -7 845 150 0 8 chr5 193865277 193865410 -5764740 + FLAM_C SINE Alu 1 132 -1 206 238 0 0 chr5 193866002 193866044 -5764106 + (TCTG)n Simple_repeat Simple_repeat 1 42 0 2183 104 3 0 chr5 193866133 193866432 -5763718 + AluSx SINE Alu 1 300 -12 437 310 21 7 chr5 193866490 193866635 -5763515 - MIR3 SINE MIR -11 197 51 1998 104 11 7 chr5 193867129 193867416 -5762734 - AluSx SINE Alu -22 290 3 1195 263 63 48 chr5 193867436 193867957 -5762193 - MLT1K LTR MaLR -22 566 38 2159 81 46 0 chr5 193867963 193868248 -5761902 + AluSx SINE Alu 1 298 -14 195 69 0 0 chr5 193868709 193868738 -5761412 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 274 56 0 0 chr5 193868745 193868781 -5761369 - Alu SINE Alu -35 267 232 268 95 0 0 chr5 193868793 193868835 -5761315 - Alu SINE Alu -257 42 1 482 121 0 0 chr5 193869000 193869066 -5761084 + AluSq SINE Alu 30 95 -218 623 105 0 0 chr5 193869068 193869154 -5760996 + AluSp/q SINE Alu 182 267 -46 2240 89 13 0 chr5 193869154 193869456 -5760694 - AluSg SINE Alu -4 306 1 1034 255 105 28 chr5 193869456 193869884 -5760266 - L2 LINE L2 -7 3306 2846 1577 107 0 4 chr5 193870122 193870347 -5759803 - AluSq SINE Alu -8 305 82 2239 98 0 3 chr5 193870372 193870668 -5759482 + AluSp SINE Alu 1 295 -18 723 277 50 5 chr5 193871068 193871270 -5758880 + MIR SINE MIR 44 254 -8 2427 60 0 16 chr5 193871450 193871766 -5758384 + AluY SINE Alu 1 311 0 516 208 16 64 chr5 193871886 193871990 -5758160 + FLAM_A SINE Alu 6 105 -206 2279 73 3 7 chr5 193871990 193872291 -5757859 - AluY SINE Alu -11 300 1 516 208 16 64 chr5 193872291 193872311 -5757839 + FLAM_A SINE Alu 105 124 -187 918 174 0 12 chr5 193872317 193872478 -5757672 - FRAM SINE Alu -19 157 1 1941 99 51 4 chr5 193872493 193872766 -5757384 - AluSg SINE Alu -24 286 1 25 0 0 0 chr5 193872768 193872793 -5757357 + AT_rich Low_complexity Low_complexity 1 25 0 1194 52 0 13 chr5 193872794 193872947 -5757203 + AluSq SINE Alu 87 237 -76 1758 111 0 12 chr5 193873071 193873324 -5756826 - AluSq SINE Alu -63 250 1 735 245 74 0 chr5 193873365 193873528 -5756622 + FAM SINE Alu 1 175 0 1738 100 4 44 chr5 193873532 193873803 -5756347 + AluSq SINE Alu 44 303 -10 658 286 51 59 chr5 193873905 193874160 -5755990 + MIR SINE MIR 8 260 -2 2084 116 0 13 chr5 193874300 193874610 -5755540 + AluSq SINE Alu 1 306 -7 1478 199 20 17 chr5 193874618 193874915 -5755235 + AluJb SINE Alu 1 298 -14 2053 125 0 3 chr5 193875420 193875715 -5754435 + AluSq SINE Alu 1 294 -19 2006 110 9 52 chr5 193875715 193876040 -5754110 + AluSx SINE Alu 1 312 0 1791 122 90 0 chr5 193876056 193876334 -5753816 + AluSx SINE Alu 1 303 -9 2158 78 34 3 chr5 193877061 193877356 -5752794 - AluSx SINE Alu -8 304 1 349 317 79 65 chr5 193877445 193877693 -5752457 - L2 LINE L2 -45 3227 2973 2443 58 0 3 chr5 193877693 193878003 -5752147 - AluY SINE Alu -1 310 2 349 317 79 65 chr5 193878003 193878044 -5752106 - L2 LINE L2 -299 2973 2934 2129 104 0 0 chr5 193878268 193878555 -5751595 + AluSx SINE Alu 1 287 -25 2361 83 0 0 chr5 193878761 193879061 -5751089 - AluSx SINE Alu -8 304 5 2024 142 0 25 chr5 193879151 193879469 -5750681 - AluSx SINE Alu 0 312 3 333 0 0 0 chr5 193879680 193879717 -5750433 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 835 173 0 0 chr5 193880795 193880928 -5749222 - FLAM_C SINE Alu 0 133 1 2249 107 0 3 chr5 193880985 193881293 -5748857 + AluSx SINE Alu 1 307 -5 2581 51 0 10 chr5 193881366 193881680 -5748470 - AluSq SINE Alu -2 311 1 2258 67 3 3 chr5 193882124 193882438 -5747712 + AluSq SINE Alu 1 314 0 2118 120 0 16 chr5 193882652 193882968 -5747182 - AluSx SINE Alu -1 311 1 1748 174 0 10 chr5 193882969 193883267 -5746883 - 7SLRNA srpRNA srpRNA -5 315 21 246 195 49 0 chr5 193884163 193884245 -5745905 + (TGGG)n Simple_repeat Simple_repeat 1 86 0 891 254 26 60 chr5 193886300 193886343 -5743807 - MER58A DNA MER1_type -2196 224 181 2101 112 0 3 chr5 193886343 193886638 -5743512 - AluSx SINE Alu -18 294 1 891 254 26 60 chr5 193886638 193886826 -5743324 - MER58A DNA MER1_type -2239 181 1 2245 111 0 0 chr5 193887010 193887316 -5742834 - AluSx SINE Alu -6 306 1 652 303 105 37 chr5 193887547 193887835 -5742315 + L1ME4a LINE L1 5272 5539 -582 2327 69 7 0 chr5 193887835 193888124 -5742026 - AluSq SINE Alu -22 291 1 652 303 105 37 chr5 193888124 193888522 -5741628 + L1ME4a LINE L1 5539 5892 -229 2113 86 0 27 chr5 193888538 193888839 -5741311 - AluSq SINE Alu -19 294 2 1473 184 7 26 chr5 193888886 193889191 -5740959 - AluJo SINE Alu -13 299 1 569 325 58 17 chr5 193889677 193889917 -5740233 + MIR SINE MIR 3 252 -10 346 324 0 70 chr5 193892224 193892409 -5737741 + MER5B DNA MER1_type 1 172 -6 2421 65 0 7 chr5 193892709 193893017 -5737133 - AluY SINE Alu -5 306 1 2194 109 3 0 chr5 193893017 193893321 -5736829 - AluSx SINE Alu -7 305 1 1206 129 0 0 chr5 193893323 193893494 -5736656 - AluSg/x SINE Alu -8 304 134 2190 74 20 3 chr5 193893494 193893791 -5736359 - AluSq SINE Alu -11 302 1 2010 135 3 0 chr5 193893797 193894093 -5736057 - AluSx SINE Alu -15 297 1 491 287 178 13 chr5 193894093 193894390 -5735760 - L2 LINE L2 -21 3292 2946 253 328 140 27 chr5 193894427 193894613 -5735537 + L3 LINE CR1 1301 1507 -70 274 268 36 98 chr5 193894737 193894776 -5735374 + MIR SINE MIR 19 59 -203 1775 127 7 55 chr5 193894776 193894932 -5735218 - AluJb SINE Alu -19 293 158 2047 115 3 20 chr5 193894932 193895236 -5734914 - AluSc SINE Alu -10 299 1 1775 127 7 55 chr5 193895236 193895387 -5734763 - AluJb SINE Alu -154 158 1 274 268 36 98 chr5 193895387 193895459 -5734691 + MIR SINE MIR 59 123 -139 2450 77 0 0 chr5 193895459 193895770 -5734380 - AluY SINE Alu 0 311 1 469 79 0 0 chr5 193895770 193895833 -5734317 - AluJo SINE Alu -15 297 235 879 188 0 0 chr5 193895833 193895982 -5734168 - AluJo SINE Alu -163 149 1 231 314 99 25 chr5 193895985 193896051 -5734099 + MIR SINE MIR 117 177 -85 1752 92 0 13 chr5 193896051 193896290 -5733860 + AluSg/x SINE Alu 66 301 -11 231 314 99 25 chr5 193896290 193896344 -5733806 + MIR SINE MIR 177 246 -16 2273 95 0 0 chr5 193896417 193896711 -5733439 - AluSg SINE Alu -16 294 1 2179 89 3 26 chr5 193896928 193897231 -5732919 - AluSx SINE Alu -3 309 14 770 254 38 45 chr5 193897270 193897534 -5732616 + L1MC4a LINE L1 6542 6803 -1005 488 317 96 11 chr5 193897552 193897823 -5732327 + L1MC4 LINE L1 7377 7670 -372 313 214 6 24 chr5 193897842 193897932 -5732218 + L1MC4 LINE L1 7904 7995 0 2119 112 24 0 chr5 193898192 193898487 -5731663 - AluSx SINE Alu -10 302 1 2146 83 14 3 chr5 193898683 193898971 -5731179 - AluSp SINE Alu -22 291 1 801 212 28 6 chr5 193899143 193899322 -5730828 + L1MD2 LINE L1 6175 6357 -2 1276 200 75 36 chr5 193899329 193899585 -5730565 + AluJo SINE Alu 1 270 -42 1841 123 0 21 chr5 193899585 193899869 -5730281 - AluSx SINE Alu -29 283 6 1276 200 75 36 chr5 193899869 193899892 -5730258 + AluJo SINE Alu 270 291 -21 1550 195 33 7 chr5 193899895 193900197 -5729953 + AluJo SINE Alu 1 310 -2 2398 73 0 0 chr5 193900286 193900586 -5729564 + AluSx SINE Alu 1 300 -12 189 0 0 0 chr5 193900586 193900607 -5729543 + (GA)n Simple_repeat Simple_repeat 2 22 0 1785 131 3 66 chr5 193900679 193900999 -5729151 + AluSx SINE Alu 1 300 -12 2135 131 0 0 chr5 193901011 193901323 -5728827 + AluSx SINE Alu 1 312 0 474 273 73 7 chr5 193901431 193901581 -5728569 + MIR SINE MIR 103 262 0 434 303 83 21 chr5 193901612 193901757 -5728393 + L3 LINE CR1 1421 1574 -3 211 313 0 0 chr5 193901759 193901826 -5728324 + GA-rich Low_complexity Low_complexity 2 68 0 1134 310 63 37 chr5 193902080 193902777 -5727373 + HAL1 LINE L1 7 721 -1786 1150 94 0 0 chr5 193902843 193903003 -5727147 + AluY SINE Alu 149 308 -3 568 154 17 103 chr5 193903008 193903125 -5727025 + FRAM SINE Alu 56 162 -14 272 281 0 24 chr5 193903136 193903218 -5726932 + HAL1 LINE L1 2319 2398 -109 2262 101 0 3 chr5 193903521 193903829 -5726321 - AluSg SINE Alu -3 307 1 566 315 63 13 chr5 193904690 193904928 -5725222 + MIR SINE MIR 3 252 -10 330 324 0 70 chr5 193907235 193907420 -5722730 + MER5B DNA MER1_type 1 172 -6 2407 62 0 10 chr5 193907720 193908029 -5722121 - AluY SINE Alu -5 306 1 2158 112 3 0 chr5 193908029 193908333 -5721817 - AluSx SINE Alu -7 305 1 2126 102 0 14 chr5 193908335 193908505 -5721645 - AluSx SINE Alu -9 303 137 2058 97 20 3 chr5 193908505 193908803 -5721347 - AluSq SINE Alu -10 303 1 2126 102 0 14 chr5 193908803 193908925 -5721225 - AluSx SINE Alu -175 137 15 345 167 90 0 chr5 193909060 193909138 -5721012 + L1ME3A LINE L1 6081 6165 -5 2030 106 3 0 chr5 193909260 193909542 -5720608 - AluSx SINE Alu -29 283 1 704 157 74 0 chr5 193910565 193910686 -5719464 - FAM SINE Alu -15 170 41 289 230 68 45 chr5 193910730 193910915 -5719235 - FRAM/FAM SINE Alu -80 86 29 248 191 0 10 chr5 193911059 193911115 -5719035 - Alu SINE Alu -93 209 170 415 230 0 0 chr5 193911115 193911189 -5718961 - AluJ/F(R)AM SINE Alu -103 209 136 1803 117 0 0 chr5 193911192 193911448 -5718702 - AluSx SINE Alu -16 296 41 2268 86 10 0 chr5 193912034 193912335 -5717815 - AluY SINE Alu -7 304 1 1243 171 0 18 chr5 193912350 193912572 -5717578 - AluJo SINE Alu -13 299 82 330 358 85 11 chr5 193912572 193912748 -5717402 - L1ME LINE L1 -378 5743 5555 496 258 74 58 chr5 193913257 193913370 -5716780 - MIR SINE MIR -60 202 83 2119 97 3 7 chr5 193913370 193913669 -5716481 + AluSq SINE Alu 1 298 -15 496 258 74 58 chr5 193913669 193913745 -5716405 - MIR SINE MIR -179 83 10 1353 74 0 6 chr5 193916110 193916285 -5713865 + AluSx SINE Alu 1 174 -138 899 120 0 21 chr5 193916339 193916481 -5713669 + AluSx SINE Alu 172 310 0 2250 103 0 10 chr5 193917376 193917686 -5712464 - AluSq SINE Alu -6 307 1 189 0 0 0 chr5 193918455 193918476 -5711674 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1722 157 27 23 chr5 193918536 193918836 -5711314 + AluJb SINE Alu 1 301 -11 1976 124 0 0 chr5 193918851 193919134 -5711016 + AluSx SINE Alu 25 307 -5 2111 114 3 3 chr5 193919171 193919479 -5710671 + AluSx SINE Alu 1 308 -4 2254 84 0 19 chr5 193920355 193920665 -5709485 - AluSg SINE Alu -6 304 1 2100 98 7 7 chr5 193920780 193921077 -5709073 - AluY SINE Alu -14 297 1 2061 135 3 0 chr5 193921123 193921434 -5708716 - AluSx SINE Alu 0 312 1 201 300 12 25 chr5 193921626 193921706 -5708444 - L2 LINE L2 -63 3250 3172 1501 110 0 9 chr5 193921987 193922205 -5707945 - AluJo SINE Alu -12 300 85 239 225 14 42 chr5 193922315 193922386 -5707764 - L2 LINE L2 -649 2665 2597 1876 139 0 23 chr5 193922735 193923045 -5707105 - AluJo SINE Alu 0 312 10 639 120 0 37 chr5 193923749 193923857 -5706293 + L1MB3 LINE L1 6080 6183 0 814 143 0 27 chr5 193924981 193925128 -5705022 - FLAM_C SINE Alu 0 143 1 749 76 145 97 chr5 193925977 193926122 -5704028 - AluSg/x SINE Alu -4 306 155 590 197 87 24 chr5 193928409 193928536 -5701614 + AluJo SINE Alu 2 136 -176 2294 90 0 0 chr5 193929536 193929836 -5700314 + AluSx SINE Alu 1 300 -12 237 65 0 0 chr5 193932697 193932728 -5697422 + (CA)n Simple_repeat Simple_repeat 1 31 0 201 214 36 24 chr5 193934160 193934244 -5695906 + (CCCG)n Simple_repeat Simple_repeat 3 87 0 254 271 12 0 chr5 193934260 193934345 -5695805 + (CCG)n Simple_repeat Simple_repeat 2 87 0 21 0 0 0 chr5 193934363 193934384 -5695766 + GC_rich Low_complexity Low_complexity 1 21 0 2245 74 3 19 chr5 193934670 193934981 -5695169 + AluSq SINE Alu 1 306 -7 1751 105 32 54 chr5 193934990 193935305 -5694845 + AluSx SINE Alu 1 308 -4 403 302 189 26 chr5 193935352 193936025 -5694125 - L2 LINE L2 -192 3080 2293 1955 132 10 0 chr5 193936145 193936434 -5693716 + AluSx SINE Alu 1 292 -20 3496 47 4 43 chr5 193936440 193936517 -5693633 + L1PA5 LINE L1 5708 5786 -368 2000 94 7 62 chr5 193936517 193936825 -5693325 + AluSc SINE Alu 1 291 -18 3496 47 4 43 chr5 193936825 193937211 -5692939 + L1PA5 LINE L1 5786 6153 -1 27 0 0 0 chr5 193937211 193937238 -5692912 + AT_rich Low_complexity Low_complexity 1 27 0 260 306 32 72 chr5 193937239 193937517 -5692633 - L1MC5 LINE L1 -191 7770 7504 645 263 15 29 chr5 193937603 193937808 -5692342 + MIR SINE MIR 30 231 -31 275 0 0 28 chr5 193937812 193937848 -5692302 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1712 106 0 0 chr5 193937908 193938144 -5692006 + AluSx SINE Alu 1 236 -76 451 235 5 43 chr5 193938249 193938436 -5691714 + CT-rich Low_complexity Low_complexity 1 180 0 2220 88 10 0 chr5 193938582 193938888 -5691262 - AluSc SINE Alu 0 309 1 2079 97 7 13 chr5 193938889 193939197 -5690953 - AluY SINE Alu -5 306 1 840 141 0 0 chr5 193939199 193939327 -5690823 - FLAM_C SINE Alu -4 139 12 2151 124 0 3 chr5 193939430 193939744 -5690406 - AluSq SINE Alu 0 313 1 408 295 0 0 chr5 193939976 193940081 -5690069 - L2 LINE L2 -5 3308 3204 2440 65 0 3 chr5 193940085 193940395 -5689755 - AluY SINE Alu 0 311 3 903 87 47 0 chr5 193940397 193940524 -5689626 - AluY SINE Alu -178 133 1 636 65 0 0 chr5 193940526 193940603 -5689547 - AluSq/x SINE Alu -180 133 57 277 266 31 0 chr5 193940851 193940915 -5689235 - L2 LINE L2 -2 3311 3246 2440 58 0 22 chr5 193941464 193941776 -5688374 - AluY SINE Alu -6 305 1 905 101 0 51 chr5 193941776 193941914 -5688236 - AluSq/x SINE Alu -176 137 7 2713 7 0 0 chr5 193942068 193942369 -5687781 - AluYa5 SINE Alu -10 301 1 191 345 0 0 chr5 193943995 193944053 -5686097 + MIR SINE MIR 87 144 -64 193 282 42 14 chr5 193944058 193944129 -5686021 + MIR SINE MIR 110 182 -80 1788 170 0 13 chr5 193944473 193944784 -5685366 + AluJo SINE Alu 1 307 -5 248 298 70 9 chr5 193945017 193945131 -5685019 - MER103 DNA DNA -45 121 1 2208 89 10 0 chr5 193945200 193945502 -5684648 - AluSp SINE Alu -8 305 1 2356 74 0 10 chr5 193947656 193947966 -5682184 - AluSx SINE Alu -5 307 1 2207 95 0 7 chr5 193948442 193948747 -5681403 - AluSg SINE Alu -7 303 1 761 182 64 182 chr5 193950012 193950094 -5680056 - MER63 DNA MER1_type -10 1052 962 196 0 27 54 chr5 193950094 193950131 -5680019 + (TTTG)n Simple_repeat Simple_repeat 1 180 0 2030 110 0 7 chr5 193950131 193950412 -5679738 - AluSg SINE Alu -31 279 1 761 182 64 182 chr5 193950412 193950443 -5679707 - MER63 DNA MER1_type -99 963 930 2028 111 10 3 chr5 193950443 193950752 -5679398 + AluSx SINE Alu 1 311 0 2216 98 0 0 chr5 193950761 193951056 -5679094 + AluSx SINE Alu 1 295 -17 761 182 64 182 chr5 193951056 193951140 -5679010 - MER63 DNA MER1_type -140 922 830 1814 163 13 7 chr5 193951140 193951447 -5678703 + AluJb SINE Alu 1 309 -3 761 182 64 182 chr5 193951447 193951514 -5678636 - MER63 DNA MER1_type -232 830 757 2065 87 52 0 chr5 193951514 193951800 -5678350 - AluSx SINE Alu -11 301 1 761 182 64 182 chr5 193951800 193951943 -5678207 - MER63 DNA MER1_type -305 757 680 847 201 13 0 chr5 193952145 193952304 -5677846 - FRAM SINE Alu -1 165 5 1293 129 9 36 chr5 193952310 193952534 -5677616 - AluJb SINE Alu -12 300 83 279 0 0 0 chr5 193952784 193952815 -5677335 + (CA)n Simple_repeat Simple_repeat 1 31 0 2021 90 0 4 chr5 193953396 193953662 -5676488 - AluSg SINE Alu -13 297 33 * 2093 133 0 0 chr5 193953660 193953960 -5676190 - AluSx SINE Alu -3 309 10 2250 94 0 7 chr5 193954386 193954685 -5675465 + AluSx SINE Alu 1 297 -15 2199 93 3 3 chr5 193955459 193955784 -5674366 - AluSc SINE Alu 0 325 1 541 335 21 21 chr5 193955899 193956093 -5674057 + MIR SINE MIR 56 249 -13 2341 75 0 25 chr5 193956123 193956442 -5673708 + AluY SINE Alu 1 311 0 288 85 0 21 chr5 193956660 193956707 -5673443 + Alu SINE Alu 2 47 -254 1903 142 7 16 chr5 193956829 193957139 -5673011 - AluSx SINE Alu -5 307 1 830 141 0 49 chr5 193957139 193957281 -5672869 - AluJo SINE Alu -177 135 1 2150 103 7 0 chr5 193958011 193958303 -5671847 + AluSg SINE Alu 1 294 -16 1951 121 46 0 chr5 193959723 193960005 -5670145 + AluSq SINE Alu 1 295 -18 1829 162 0 23 chr5 193960015 193960324 -5669826 + AluJo SINE Alu 1 302 -10 1333 170 174 8 chr5 193960926 193961185 -5668965 + AluJo SINE Alu 1 302 0 2158 98 0 7 chr5 193961227 193961522 -5668628 - AluSg1 SINE Alu -16 293 1 223 326 65 0 chr5 193963657 193963749 -5666401 + L2 LINE L2 3159 3256 -16 2114 114 0 20 chr5 193963755 193964061 -5666089 + AluSg SINE Alu 1 300 -10 2037 91 53 0 chr5 193965452 193965737 -5664413 - AluSq SINE Alu -13 300 1 2439 61 3 3 chr5 193966187 193966498 -5663652 - AluY SINE Alu 0 311 1 430 158 232 11 chr5 193966527 193966622 -5663528 + AluJb SINE Alu 2 117 -195 1509 132 0 19 chr5 193966657 193966922 -5663228 + AluSx SINE Alu 48 307 -5 1247 177 16 20 chr5 193966922 193967067 -5663083 - AluJo SINE Alu -35 277 132 1906 146 3 7 chr5 193967067 193967361 -5662789 - AluSx SINE Alu -19 293 1 1247 177 16 20 chr5 193967361 193967458 -5662692 - AluJo SINE Alu -180 132 36 271 216 27 0 chr5 193967580 193967654 -5662496 + L1M4 LINE L1 5127 5202 -944 2095 106 3 3 chr5 193967655 193967956 -5662194 + AluSg SINE Alu 1 301 -9 474 191 0 0 chr5 193967958 193968042 -5662108 + AluS SINE Alu 1 84 -228 253 197 92 0 chr5 193968042 193968118 -5662032 + L1M4 LINE L1 5192 5274 -872 249 102 0 0 chr5 193968153 193968202 -5661948 + L1M4 LINE L1 5263 5311 -835 960 149 0 18 chr5 193968204 193968372 -5661778 - AluSg/x SINE Alu -20 290 126 943 106 6 0 chr5 193968372 193968532 -5661618 + L1M4 LINE L1 5304 5464 -710 2073 97 10 3 chr5 193968551 193968839 -5661311 + AluSg SINE Alu 1 290 -20 2100 92 20 10 chr5 193968839 193969131 -5661019 + AluSg SINE Alu 1 295 -15 2304 93 3 0 chr5 193969134 193969444 -5660706 + AluSx SINE Alu 1 311 -1 180 0 0 0 chr5 193969736 193969756 -5660394 + (GAAA)n Simple_repeat Simple_repeat 2 21 0 2144 102 10 10 chr5 193969757 193970051 -5660099 + AluSg SINE Alu 1 294 -16 2148 93 28 3 chr5 193970683 193970972 -5659178 + AluSc SINE Alu 1 296 -13 2042 131 0 3 chr5 193971034 193971331 -5658819 + AluSx SINE Alu 1 296 -16 2430 58 0 3 chr5 193971379 193971674 -5658476 + AluY SINE Alu 1 294 -17 672 132 7 132 chr5 193971715 193971867 -5658283 + FLAM_C SINE Alu 1 133 0 894 90 0 0 chr5 193976069 193976191 -5653959 + AluSq/x SINE Alu 1 122 -191 2274 81 0 10 chr5 193976191 193976500 -5653650 - AluSx SINE Alu -6 306 1 2245 96 0 7 chr5 193978542 193978845 -5651305 + AluSx SINE Alu 1 301 -11 2209 99 0 3 chr5 193979410 193979712 -5650438 - AluSx SINE Alu -11 301 1 250 289 133 0 chr5 193982482 193982565 -5647585 + MIR SINE MIR 99 192 -70 392 223 71 0 chr5 193982714 193982826 -5647324 - L1ME3 LINE L1 0 6162 6043 1773 171 3 3 chr5 193982826 193983118 -5647032 + AluJb SINE Alu 1 292 -20 2115 95 33 16 chr5 193983246 193983550 -5646600 + AluSx SINE Alu 1 309 -3 322 280 224 0 chr5 193983556 193983699 -5646451 - MIR SINE MIR -71 191 17 2327 87 0 13 chr5 193985786 193986095 -5644055 + AluSp SINE Alu 1 305 -8 231 329 66 0 chr5 193987174 193987250 -5642900 + MIR SINE MIR 112 192 -70 2257 102 0 3 chr5 193987306 193987611 -5642539 + AluSx SINE Alu 1 304 -8 1348 131 54 5 chr5 193988267 193988488 -5641662 + AluJo SINE Alu 63 294 -18 251 298 44 35 chr5 193988634 193988748 -5641402 - MIR SINE MIR -72 136 22 229 333 90 18 chr5 193988893 193989004 -5641146 - MIR SINE MIR -44 218 100 357 329 53 53 chr5 193989245 193989488 -5640662 + L2 LINE L2 2993 3235 -37 1372 119 0 15 chr5 193989902 193990103 -5640047 - AluSq SINE Alu -17 296 99 2400 44 3 3 chr5 193990151 193990446 -5639704 + AluY SINE Alu 1 295 -16 1790 158 24 3 chr5 193990446 193990738 -5639412 + AluJb SINE Alu 1 298 -14 881 155 19 19 chr5 193990738 193990899 -5639251 + AluJo/FRAM SINE Alu 135 295 -17 215 260 192 0 chr5 193990975 193991048 -5639102 + L2 LINE L2 3173 3259 -13 2245 79 0 0 chr5 193991263 193991564 -5638586 - AluY SINE Alu 0 301 1 2209 103 20 0 chr5 193991569 193991748 -5638402 - AluSg SINE Alu -2 308 119 261 0 0 0 chr5 193991748 193991777 -5638373 + (TG)n Simple_repeat Simple_repeat 2 30 0 2209 103 20 0 chr5 193991777 193991899 -5638251 - AluSg SINE Alu -191 119 1 556 291 34 17 chr5 193992108 193992283 -5637867 - MIR SINE MIR -74 188 11 2404 60 7 3 chr5 193992378 193992677 -5637473 + AluSg SINE Alu 1 300 -10 324 294 73 7 chr5 193992805 193992941 -5637209 - L2 LINE L2 -21 3292 3148 2364 61 3 3 chr5 193992973 193993269 -5636881 + AluY SINE Alu 1 296 -15 799 203 19 6 chr5 193993510 193993668 -5636482 + AluJo SINE Alu 121 280 -32 1766 126 70 0 chr5 193994134 193994405 -5635745 - AluSg SINE Alu -20 290 1 509 338 6 6 chr5 193994431 193994587 -5635563 - MIR SINE MIR -1 261 106 593 258 7 20 chr5 193994587 193994738 -5635412 + MIR SINE MIR 3 151 -111 1395 188 36 33 chr5 193994741 193995044 -5635106 + AluJo SINE Alu 3 306 -6 1665 113 60 15 chr5 193996168 193996433 -5633717 - AluJb SINE Alu -35 277 1 210 253 35 58 chr5 193997412 193997499 -5632651 - L3 LINE CR1 -939 638 554 219 346 19 58 chr5 193999511 193999615 -5630535 - MIR SINE MIR -60 148 84 214 272 0 22 chr5 194001816 194001908 -5628242 + (CGGGG)n Simple_repeat Simple_repeat 5 94 0 28 102 0 0 chr5 194001931 194002029 -5628121 + GC_rich Low_complexity Low_complexity 1 98 0 32 75 0 0 chr5 194002051 194002118 -5628032 + GC_rich Low_complexity Low_complexity 1 67 0 199 246 237 9 chr5 194002654 194002768 -5627382 - L2 LINE L2 -209 3063 2924 2014 103 0 4 chr5 194003109 194003426 -5626724 - AluY SINE Alu 0 316 1 428 123 55 0 chr5 194003585 194003658 -5626492 - AluS SINE Alu -9 300 224 26 111 0 0 chr5 194003883 194004000 -5626150 + GC_rich Low_complexity Low_complexity 1 117 0 1800 128 10 28 chr5 194004216 194004505 -5625645 - AluJo SINE Alu -17 295 12 186 259 205 54 chr5 194005294 194005460 -5624690 + MIR SINE MIR 39 229 -33 2203 91 0 10 chr5 194005965 194006273 -5623877 - AluSx SINE Alu -7 305 1 219 286 36 0 chr5 194006317 194006401 -5623749 + C-rich Low_complexity Low_complexity 4 90 0 275 263 40 0 chr5 194006815 194006891 -5623259 - MIR SINE MIR -111 151 73 2385 72 0 0 chr5 194007093 194007397 -5622753 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr5 194007685 194007708 -5622442 + GC_rich Low_complexity Low_complexity 1 23 0 239 270 0 0 chr5 194007952 194008015 -5622135 + C-rich Low_complexity Low_complexity 1 63 0 2072 105 6 16 chr5 194008155 194008469 -5621681 - AluSq SINE Alu -2 311 1 2166 105 23 0 chr5 194008678 194008983 -5621167 + AluSx SINE Alu 1 312 0 2220 89 7 3 chr5 194009288 194009591 -5620559 - AluSx SINE Alu -8 304 1 2272 84 0 0 chr5 194010017 194010314 -5619836 + AluSx SINE Alu 1 297 -15 1880 139 56 0 chr5 194010777 194011064 -5619086 - AluSq SINE Alu -10 303 1 1670 150 0 44 chr5 194011146 194011289 -5618861 + AluJb SINE Alu 3 151 -182 2288 90 0 0 chr5 194011289 194011589 -5618561 + AluY SINE Alu 1 300 -11 1670 150 0 44 chr5 194011589 194011789 -5618361 + AluJb SINE Alu 151 333 0 2125 110 0 16 chr5 194012446 194012763 -5617387 - AluSx SINE Alu 0 312 1 284 118 47 106 chr5 194012816 194012901 -5617249 + AluSp/q SINE Alu 224 303 0 2452 32 0 0 chr5 194012915 194013198 -5616952 + AluY SINE Alu 1 283 -28 23 68 0 0 chr5 194013198 194013242 -5616908 + AT_rich Low_complexity Low_complexity 1 44 0 1363 98 0 0 chr5 194013243 194013427 -5616723 + AluSg/x SINE Alu 121 304 -8 249 250 0 48 chr5 194013433 194013537 -5616613 + Charlie7 DNA MER1_type 2514 2612 0 539 216 0 0 chr5 194013556 194013658 -5616492 - U13 snRNA snRNA -2 102 1 2310 88 0 3 chr5 194014749 194015054 -5615096 - AluSx SINE Alu -8 304 1 366 306 116 32 chr5 194015564 194015780 -5614370 + MIR SINE MIR 14 247 -15 389 262 139 0 chr5 194015936 194016058 -5614092 + L2 LINE L2 3133 3271 -1 1992 109 7 7 chr5 194016066 194016381 -5613769 + AluSx SINE Alu 1 315 0 2035 111 14 0 chr5 194016387 194016696 -5613454 + AluSx SINE Alu 1 313 0 2087 94 0 14 chr5 194017446 194017756 -5612394 + AluSx SINE Alu 1 306 0 267 296 28 19 chr5 194019083 194019191 -5610959 - MIR SINE MIR -141 121 13 2406 47 0 7 chr5 194019648 194019944 -5610206 + AluY SINE Alu 1 294 -17 2231 100 0 7 chr5 194019998 194020323 -5609827 + AluSx SINE Alu 1 312 0 1156 88 0 0 chr5 194020323 194020470 -5609680 + AluSq SINE Alu 134 280 -33 273 183 10 139 chr5 194020954 194021156 -5608994 + CT-rich Low_complexity Low_complexity 4 179 0 1323 153 0 5 chr5 194021521 194021736 -5608414 + AluJo SINE Alu 1 214 -98 297 102 0 20 chr5 194021736 194021785 -5608365 + AluJb SINE Alu 79 126 -176 1319 77 0 6 chr5 194021787 194021956 -5608194 + AluSq SINE Alu 1 168 -145 1829 136 3 30 chr5 194021977 194022278 -5607872 + AluJo SINE Alu 3 295 -17 183 114 0 0 chr5 194023375 194023410 -5606740 + (A)n Simple_repeat Simple_repeat 1 35 0 299 302 75 9 chr5 194024854 194024960 -5605190 + MIR SINE MIR 80 192 -70 22 0 0 0 chr5 194026337 194026359 -5603791 + GC_rich Low_complexity Low_complexity 1 22 0 657 193 15 7 chr5 194027371 194027506 -5602644 + FLAM_C SINE Alu 7 142 -1 1973 138 13 13 chr5 194027906 194028218 -5601932 - AluJo SINE Alu 0 312 1 481 342 71 12 chr5 194028678 194028918 -5601232 + L2 LINE L2 3014 3267 -5 1807 94 0 0 chr5 194028945 194029180 -5600970 + AluSq SINE Alu 1 235 -78 2031 125 0 7 chr5 194029292 194029601 -5600549 + AluSq SINE Alu 1 307 0 587 339 68 38 chr5 194029601 194029804 -5600346 + L1ME4a LINE L1 5686 5908 -213 2064 99 51 0 chr5 194029804 194030097 -5600053 + AluSg SINE Alu 1 308 -2 587 339 68 38 chr5 194030097 194030220 -5599930 + L1ME4a LINE L1 5908 6026 -95 2071 120 3 3 chr5 194030236 194030536 -5599614 + AluSx SINE Alu 1 300 -12 314 240 91 32 chr5 194030768 194030922 -5599228 - L1ME4a LINE L1 -7 6114 5952 2338 74 0 3 chr5 194030941 194031240 -5598910 + AluY SINE Alu 1 298 -13 646 297 60 78 chr5 194032605 194032621 -5597529 + L2 LINE L2 2821 2836 -436 913 133 0 15 chr5 194032621 194032756 -5597394 - FLAM_C SINE Alu 0 133 1 646 297 60 78 chr5 194032756 194033187 -5596963 + L2 LINE L2 2836 3260 -12 1974 100 71 0 chr5 194033187 194033468 -5596682 + AluSc SINE Alu 1 301 -8 181 246 16 33 chr5 194033975 194034036 -5596114 + L2 LINE L2 2721 2780 -534 276 75 0 0 chr5 194034116 194034156 -5595994 + MIR SINE MIR 102 141 -67 523 14 42 0 chr5 194034162 194034233 -5595917 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 189 0 0 0 chr5 194034297 194034318 -5595832 + (TC)n Simple_repeat Simple_repeat 2 22 0 2263 84 3 0 chr5 194034319 194034605 -5595545 - AluSq SINE Alu -25 288 2 216 98 24 0 chr5 194034613 194034654 -5595496 + L2 LINE L2 3019 3060 -212 2253 114 3 0 chr5 194036058 194036365 -5593785 + AluSx SINE Alu 1 308 -4 185 205 0 26 chr5 194037632 194037671 -5592479 + MIR SINE MIR 112 149 -113 1879 139 115 2 chr5 194037952 194038360 -5591790 + MER1A DNA MER1_type 1 539 0 2456 74 0 0 chr5 194038544 194038856 -5591294 - AluSx SINE Alu 0 312 1 32 26 0 0 chr5 194038982 194039021 -5591129 + AT_rich Low_complexity Low_complexity 1 39 0 3486 35 0 0 chr5 194039021 194039427 -5590723 - L1PA2 LINE L1 -3 6152 5747 2081 91 31 0 chr5 194039544 194039831 -5590319 - AluSx SINE Alu -11 301 6 335 238 28 42 chr5 194040127 194040270 -5589880 + (CCCCG)n Simple_repeat Simple_repeat 3 143 0 283 303 123 16 chr5 194043083 194043205 -5586945 - MIR SINE MIR -20 242 108 2306 86 0 7 chr5 194044088 194044389 -5585761 - AluSx SINE Alu -9 303 5 216 301 91 68 chr5 194045052 194045271 -5584879 + L2 LINE L2 3043 3266 -6 21 36 0 0 chr5 194045841 194045869 -5584281 + GC_rich Low_complexity Low_complexity 1 28 0 230 122 0 92 chr5 194046073 194046171 -5583979 + (CCCCG)n Simple_repeat Simple_repeat 5 93 0 24 0 0 0 chr5 194046302 194046326 -5583824 + GC_rich Low_complexity Low_complexity 1 24 0 24 61 0 0 chr5 194047641 194047674 -5582476 + AT_rich Low_complexity Low_complexity 1 33 0 465 283 30 24 chr5 194048905 194049071 -5581079 + MER5A DNA MER1_type 1 167 -22 1722 139 12 0 chr5 194049274 194049525 -5580625 - AluSx SINE Alu -27 285 32 1631 196 0 13 chr5 194049569 194049870 -5580280 - AluJb SINE Alu -15 297 1 329 148 247 0 chr5 194049870 194049951 -5580199 - AluJo/FRAM SINE Alu -49 253 153 1957 125 0 32 chr5 194049951 194050264 -5579886 - AluSx SINE Alu -9 303 1 1459 158 18 18 chr5 194051658 194051943 -5578207 - AluJo SINE Alu -13 299 15 2179 93 10 7 chr5 194051983 194052285 -5577865 - AluSx SINE Alu -9 303 1 2254 67 3 10 chr5 194052657 194052957 -5577193 - AluY SINE Alu -13 298 1 1968 113 7 13 chr5 194052957 194053257 -5576893 - AluSx SINE Alu -14 298 1 2394 58 0 10 chr5 194054410 194054718 -5575432 + AluY SINE Alu 1 305 -6 2130 77 0 32 chr5 194054729 194055042 -5575108 + AluY SINE Alu 1 303 -8 1988 134 3 10 chr5 194056077 194056391 -5573759 - AluSx SINE Alu 0 312 1 254 88 18 70 chr5 194059337 194059394 -5570756 + L1M4 LINE L1 5387 5440 -738 2107 135 0 0 chr5 194059394 194059697 -5570453 + AluSx SINE Alu 1 303 -9 773 100 21 3 chr5 194059708 194059949 -5570201 + AluSx SINE Alu 1 309 0 2000 236 100 67 chr5 194059949 194060536 -5569614 + L1MEc LINE L1 1735 2301 -3914 1870 139 13 10 chr5 194060536 194060845 -5569305 + AluSg SINE Alu 1 310 0 2000 236 100 67 chr5 194060845 194061156 -5568994 + L1MEc LINE L1 2301 2600 -3615 1658 139 0 8 chr5 194061156 194061415 -5568735 - AluJb SINE Alu -31 281 25 2000 236 100 67 chr5 194061415 194061632 -5568518 + L1MEc LINE L1 2600 2808 -3407 711 173 14 65 chr5 194061632 194061771 -5568379 + FLAM_C SINE Alu 2 133 0 2000 236 100 67 chr5 194061771 194061982 -5568168 + L1MEc LINE L1 2808 3011 -3204 2101 104 0 19 chr5 194061982 194062289 -5567861 + AluSg SINE Alu 1 301 -9 2000 236 100 67 chr5 194062289 194062367 -5567783 + L1MEc LINE L1 3011 3085 -3130 2142 103 3 3 chr5 194062367 194062668 -5567482 + AluY SINE Alu 1 301 -10 2215 96 0 16 chr5 194062672 194062984 -5567166 + AluSg SINE Alu 1 307 -3 2012 110 3 26 chr5 194062990 194063299 -5566851 + AluY SINE Alu 1 302 -9 2000 236 100 67 chr5 194063299 194063382 -5566768 + L1MEc LINE L1 3091 3170 -3045 1595 168 22 35 chr5 194063382 194063698 -5566452 + AluSx SINE Alu 1 312 0 2000 236 100 67 chr5 194063698 194063750 -5566400 + L1MEc LINE L1 3170 3295 -2920 2248 98 0 0 chr5 194064009 194064304 -5565846 + AluSg SINE Alu 1 295 -15 2257 93 7 3 chr5 194064655 194064957 -5565193 - AluSg SINE Alu -7 303 1 831 178 0 7 chr5 194064958 194065093 -5565057 - AluJo SINE Alu -178 134 1 687 214 52 12 chr5 194065139 194065312 -5564838 - MIR SINE MIR -71 191 12 2033 81 0 34 chr5 194065472 194065792 -5564358 - AluY SINE Alu -2 309 1 462 289 64 139 chr5 194066105 194066242 -5563908 + L2 LINE L2 1452 1598 -1716 1883 85 3 37 chr5 194066242 194066536 -5563614 - AluSx SINE Alu -17 295 12 462 289 64 139 chr5 194066536 194067632 -5562518 + L2 LINE L2 1598 2542 -772 2150 104 3 0 chr5 194067632 194067939 -5562211 - AluSx SINE Alu -4 308 1 462 289 64 139 chr5 194067939 194068291 -5561859 + L2 LINE L2 2542 2919 -395 907 120 91 86 chr5 194068438 194068590 -5561560 + MER46A DNA MER2_type 25 180 -2551 1378 168 63 36 chr5 194068590 194068725 -5561425 + AluJo SINE Alu 1 131 -181 2346 67 0 16 chr5 194068725 194069041 -5561109 + AluY SINE Alu 1 311 0 1378 168 63 36 chr5 194069041 194069208 -5560942 + AluJo SINE Alu 131 311 -1 907 120 91 86 chr5 194069208 194069264 -5560886 + MER46A DNA MER2_type 180 234 -2 1995 109 0 22 chr5 194069434 194069746 -5560404 - AluSx SINE Alu -7 305 1 2115 75 10 13 chr5 194071193 194071500 -5558650 - AluY SINE Alu -5 306 1 2062 84 0 18 chr5 194071967 194072252 -5557898 - AluSg SINE Alu -30 280 1 643 214 30 23 chr5 194073939 194074070 -5556080 + FLAM_A SINE Alu 1 132 -1 1945 134 0 10 chr5 194075231 194075536 -5554614 + AluSx SINE Alu 1 302 -10 1106 119 0 6 chr5 194075538 194075698 -5554452 + AluSq SINE Alu 137 295 -18 1208 188 44 53 chr5 194077381 194077700 -5552450 + L1MB8 LINE L1 5849 6164 -14 1584 160 27 34 chr5 194078343 194078637 -5551513 - AluJo SINE Alu -18 294 3 189 0 0 0 chr5 194079345 194079366 -5550784 + (CCA)n Simple_repeat Simple_repeat 2 22 0 278 302 73 0 chr5 194079905 194080001 -5550149 + L2 LINE L2 3122 3224 -48 2333 84 0 6 chr5 194080257 194080568 -5549582 - AluY SINE Alu -2 309 1 413 284 49 67 chr5 194081106 194081166 -5548984 + L2 LINE L2 3092 3152 -161 1985 89 0 20 chr5 194081166 194081470 -5548680 - AluSx SINE Alu -14 298 1 413 284 49 67 chr5 194081470 194081634 -5548516 + L2 LINE L2 3152 3312 -1 2094 80 3 13 chr5 194082620 194082920 -5547230 + AluSx SINE Alu 1 297 -15 836 200 0 12 chr5 194083212 194083382 -5546768 + FRAM SINE Alu 1 163 -13 2092 86 0 27 chr5 194083429 194083730 -5546420 + AluSq SINE Alu 2 294 -19 749 304 104 36 chr5 194083746 194084147 -5546003 - L1MC4a LINE L1 -312 5809 5539 2266 69 7 3 chr5 194084147 194084437 -5545713 + AluSq SINE Alu 1 291 -22 749 304 104 36 chr5 194084437 194084725 -5545425 - L1MC4a LINE L1 -582 5539 5272 2109 110 0 10 chr5 194084957 194085266 -5544884 + AluSx SINE Alu 1 306 -6 707 231 20 128 chr5 194085453 194085659 -5544491 + MER58A DNA MER1_type 1 177 -2243 2075 106 0 0 chr5 194085659 194085942 -5544208 + AluSx SINE Alu 13 295 -17 707 231 20 128 chr5 194085942 194085986 -5544164 + MER58A DNA MER1_type 177 224 0 223 185 62 0 chr5 194088069 194088150 -5542000 + (CCCA)n Simple_repeat Simple_repeat 1 86 0 1584 171 0 26 chr5 194089055 194089359 -5540791 + 7SLRNA srpRNA srpRNA 21 316 -4 1902 91 0 62 chr5 194089360 194089680 -5540470 + AluSx SINE Alu 1 300 -12 312 27 0 0 chr5 194090296 194090333 -5539817 + (TG)n Simple_repeat Simple_repeat 1 37 0 1271 129 9 36 chr5 194090585 194090809 -5539341 + AluJb SINE Alu 83 300 -12 817 200 12 6 chr5 194090815 194090975 -5539175 + FRAM SINE Alu 5 165 -1 636 193 88 152 chr5 194091179 194091322 -5538828 + MER63 DNA MER1_type 680 831 -231 1781 95 51 31 chr5 194091322 194091616 -5538534 + AluSx SINE Alu 1 300 -12 636 193 88 152 chr5 194091616 194091683 -5538467 + MER63 DNA MER1_type 831 868 -194 1778 163 13 7 chr5 194091683 194091990 -5538160 - AluJb SINE Alu -3 309 1 636 193 88 152 chr5 194091990 194092074 -5538076 + MER63 DNA MER1_type 868 956 -106 1437 71 0 0 chr5 194092074 194092257 -5537893 - AluSg/x SINE Alu -17 293 111 249 83 0 0 chr5 194092438 194092474 -5537676 + (CAT)n Simple_repeat Simple_repeat 1 36 0 450 205 5 166 chr5 194092517 194092578 -5537572 + L1MD3 LINE L1 7776 7845 -150 2070 105 7 7 chr5 194092578 194092874 -5537276 + AluSg SINE Alu 1 296 -14 450 205 5 166 chr5 194092874 194092942 -5537208 + L1MD3 LINE L1 7845 7922 -73 2410 59 0 3 chr5 194092942 194093245 -5536905 + AluY SINE Alu 1 302 -9 450 205 5 166 chr5 194093245 194093265 -5536885 + L1MD3 LINE L1 7922 7888 -107 1943 142 7 3 chr5 194093265 194093568 -5536582 + AluSx SINE Alu 1 304 -8 450 205 5 166 chr5 194093568 194093621 -5536529 + L1MD3 LINE L1 7887 7947 -48 1940 109 3 14 chr5 194093662 194093955 -5536195 + AluSq SINE Alu 13 302 -11 334 201 34 19 chr5 194094019 194094108 -5536042 - L1MB7 LINE L1 -65 6113 6029 293 0 27 0 chr5 194094111 194094148 -5536002 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 8251 34 7 236 chr5 194094148 194095916 -5534234 - SVA Other Other -23 1363 1 342 67 0 0 chr5 194095916 194095961 -5534189 + (GGGAGA)n Simple_repeat Simple_repeat 5 49 0 2105 118 0 13 chr5 194196818 194197132 -5433018 - AluSx SINE Alu -2 310 1 1576 227 39 3 chr5 194197343 194197678 -5432472 + MER7A DNA MER2_type 2 346 0 1635 201 16 0 chr5 194197863 194198172 -5431978 + 7SLRNA srpRNA srpRNA 1 314 -6 2093 119 0 0 chr5 194198321 194198616 -5431534 + AluSg SINE Alu 11 305 -5 774 159 68 0 chr5 194198814 194198946 -5431204 - FLAM_C SINE Alu -1 142 2 209 128 26 0 chr5 194198950 194198989 -5431161 + T-rich Low_complexity Low_complexity 4 43 0 559 279 25 6 chr5 194199021 194199182 -5430968 + MIR SINE MIR 93 256 -6 355 276 127 0 chr5 194199208 194199342 -5430808 - MIR SINE MIR -54 208 58 545 279 49 15 chr5 194199825 194200029 -5430121 + MIR SINE MIR 9 219 -43 1731 131 0 93 chr5 194200144 194200487 -5429663 + AluSx SINE Alu 1 311 -1 195 302 0 0 chr5 194200568 194200621 -5429529 + MIR SINE MIR 87 139 -69 344 247 29 41 chr5 194200837 194200848 -5429302 + L1M4 LINE L1 3073 3083 -3063 2108 107 10 3 chr5 194200848 194201156 -5428994 + AluSg SINE Alu 1 310 0 344 247 29 41 chr5 194201156 194201273 -5428877 + L1M4 LINE L1 3083 3198 -2948 21 0 0 0 chr5 194202137 194202158 -5427992 + GC_rich Low_complexity Low_complexity 1 21 0 29 108 0 15 chr5 194202241 194202436 -5427714 + GC_rich Low_complexity Low_complexity 1 192 0 191 233 0 0 chr5 194202865 194202908 -5427242 - MIR SINE MIR -141 121 79 243 337 16 2 chr5 194203412 194203522 -5426628 - MIR SINE MIR -56 152 51 316 313 113 0 chr5 194204244 194204359 -5425791 + MIR SINE MIR 56 183 -79 276 219 0 16 chr5 194204693 194204757 -5425393 + Charlie8 DNA MER1_type 135 197 -2220 220 368 43 25 chr5 194205068 194205231 -5424919 - L2 LINE L2 -190 3082 2917 430 132 15 0 chr5 194205290 194205358 -5424792 + MIR SINE MIR 78 146 -62 220 406 0 12 chr5 194205535 194205700 -5424450 - L2 LINE L2 -195 3077 2915 2235 99 0 0 chr5 194205909 194206202 -5423948 - AluSg SINE Alu -17 293 1 344 276 112 33 chr5 194207219 194207371 -5422779 + MIR SINE MIR 49 212 -50 21 0 0 0 chr5 194208186 194208207 -5421943 + GC_rich Low_complexity Low_complexity 1 21 0 240 237 13 52 chr5 194209284 194209380 -5420770 - MIR SINE MIR -61 147 77 203 294 33 33 chr5 194209822 194209914 -5420236 + MIR SINE MIR 69 160 -102 236 360 11 0 chr5 194210032 194210121 -5420029 + MIR SINE MIR 56 145 -63 281 238 38 0 chr5 194210373 194210453 -5419697 - MIR SINE MIR -93 169 87 195 311 82 25 chr5 194210719 194210841 -5419309 + MIR SINE MIR 7 135 -127 280 321 15 46 chr5 194210958 194211089 -5419061 - MER5A DNA MER1_type -1 188 62 341 223 116 9 chr5 194212118 194212230 -5417920 + MIR SINE MIR 21 144 -118 1647 79 0 26 chr5 194212843 194213071 -5417079 - AluSc SINE Alu -1 308 87 197 273 0 0 chr5 194213727 194213771 -5416379 - MIR SINE MIR -109 153 110 205 191 0 0 chr5 194218620 194218662 -5411488 + (TA)n Simple_repeat Simple_repeat 1 42 0 1017 103 0 19 chr5 194219068 194219223 -5410927 + AluSx SINE Alu 19 170 -142 2298 63 0 11 chr5 194219223 194219510 -5410640 + AluY SINE Alu 10 293 -18 1057 133 19 0 chr5 194219510 194219668 -5410482 + AluSg/x SINE Alu 134 294 -18 831 153 8 0 chr5 194219758 194219889 -5410261 - FLAM_C SINE Alu -11 132 1 957 143 0 12 chr5 194219962 194220123 -5410027 - AluJb SINE Alu -153 159 1 875 208 44 4 chr5 194220131 194220357 -5409793 + L1ME3 LINE L1 4374 4608 -1538 344 158 86 148 chr5 194220398 194220440 -5409710 + AluJo/FLAM SINE Alu 26 69 -233 2044 110 9 31 chr5 194220440 194220622 -5409528 - AluSx SINE Alu 0 312 138 2341 84 3 0 chr5 194220622 194220932 -5409218 - AluSx SINE Alu -1 311 1 2044 110 9 31 chr5 194220932 194221068 -5409082 - AluSx SINE Alu -174 138 1 1969 139 10 3 chr5 194221071 194221380 -5408770 - AluSx SINE Alu -1 311 1 344 158 86 148 chr5 194221380 194221475 -5408675 + AluJo/FLAM SINE Alu 71 132 -170 314 169 0 0 chr5 194221490 194221561 -5408589 + L1ME3 LINE L1 4635 4705 -1441 2316 90 0 0 chr5 194221561 194221861 -5408289 + AluSq SINE Alu 1 300 -13 1791 159 23 13 chr5 194221863 194222172 -5407978 + AluJo SINE Alu 1 312 0 407 76 25 25 chr5 194222181 194222260 -5407890 + (GGA)n Simple_repeat Simple_repeat 2 80 0 785 186 96 5 chr5 194222260 194222459 -5407691 + L1ME3 LINE L1 4697 4913 -1233 474 217 175 33 chr5 194222460 194222901 -5407249 + L1ME3 LINE L1 4964 5487 -783 2045 110 3 7 chr5 194222905 194223196 -5406954 + AluSx SINE Alu 1 290 -22 853 201 178 36 chr5 194223198 194223329 -5406821 + L1MD2 LINE L1 6005 6116 -243 188 67 33 0 chr5 194223329 194223359 -5406791 + (CA)n Simple_repeat Simple_repeat 2 32 0 853 201 178 36 chr5 194223359 194223531 -5406619 + L1MD2 LINE L1 6116 6351 -8 193 365 56 28 chr5 194223540 194223647 -5406503 - L2 LINE L2 -3 3310 3201 1042 164 0 0 chr5 194224802 194224967 -5405183 - FRAM SINE Alu 0 166 2 456 293 0 25 chr5 194224992 194225151 -5404999 - MIR3 SINE MIR -76 132 3 180 301 35 63 chr5 194225151 194225287 -5404863 + L2 LINE L2 2959 3090 -182 1812 128 3 16 chr5 194225879 194226185 -5403965 - AluSx SINE Alu 0 312 11 256 108 0 0 chr5 194226286 194226323 -5403827 - Alu SINE Alu -259 42 6 322 227 18 100 chr5 194226352 194226379 -5403771 + L1ME4a LINE L1 5954 5982 -139 2218 98 3 3 chr5 194226379 194226686 -5403464 + AluSx SINE Alu 1 307 -5 322 227 18 100 chr5 194226686 194226768 -5403382 + L1ME4a LINE L1 5982 6054 -67 2061 138 3 3 chr5 194226773 194227085 -5403065 - AluSx SINE Alu 0 312 1 1347 161 28 92 chr5 194227086 194227186 -5402964 - AluJb SINE Alu -15 297 192 2266 106 0 0 chr5 194227186 194227487 -5402663 + AluSx SINE Alu 1 301 -11 1347 161 28 92 chr5 194227487 194227552 -5402598 - AluJb SINE Alu -120 192 124 2136 92 3 14 chr5 194227552 194227866 -5402284 - AluSp SINE Alu 0 313 1 1347 161 28 92 chr5 194227866 194228016 -5402134 - AluJb SINE Alu -188 124 1 2303 85 0 0 chr5 194228046 194228341 -5401809 - AluSg1 SINE Alu -14 295 1 305 298 96 55 chr5 194228849 194229141 -5401009 + L1ME3 LINE L1 5520 5823 -298 2335 47 0 0 chr5 194229149 194229425 -5400725 + AluSx SINE Alu 1 276 -36 306 0 0 0 chr5 194229426 194229460 -5400690 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1517 176 30 4 chr5 194229518 194229785 -5400365 - AluSx SINE Alu -38 274 1 2223 106 0 7 chr5 194229847 194230148 -5400002 + AluSq SINE Alu 1 299 -14 480 35 0 0 chr5 194230299 194230357 -5399793 + (CA)n Simple_repeat Simple_repeat 2 59 0 1107 149 87 0 chr5 194230373 194230568 -5399582 + AluJo SINE Alu 87 298 -14 2274 68 0 0 chr5 194230571 194230886 -5399264 + AluY SINE Alu 1 315 0 674 229 122 10 chr5 194230889 194231094 -5399056 + L1ME3 LINE L1 5934 6161 -1 1866 163 7 0 chr5 194231147 194231442 -5398708 - AluJb SINE Alu -15 297 1 2307 80 0 3 chr5 194232460 194232760 -5397390 + AluSc SINE Alu 1 299 -10 304 222 265 43 chr5 194233146 194233308 -5396842 - MIR SINE MIR -16 246 49 2315 99 0 6 chr5 194233314 194233628 -5396522 + AluSx SINE Alu 1 312 0 1225 112 0 12 chr5 194233797 194233967 -5396183 - AluSp SINE Alu -22 291 124 2001 101 42 3 chr5 194233971 194234258 -5395892 - AluSx SINE Alu -14 298 1 1486 80 244 0 chr5 194234518 194234756 -5395394 + AluSg1 SINE Alu 1 296 -13 2305 79 0 13 chr5 194234756 194235071 -5395079 + AluY SINE Alu 1 311 0 2333 73 0 13 chr5 194235078 194235393 -5394757 + AluY SINE Alu 1 311 0 429 327 36 12 chr5 194235607 194235772 -5394378 - MIR SINE MIR -54 208 40 33 25 0 0 chr5 194238959 194238999 -5391151 + AT_rich Low_complexity Low_complexity 1 40 0 237 65 0 0 chr5 194239330 194239361 -5390789 + (CA)n Simple_repeat Simple_repeat 2 32 0 360 310 25 35 chr5 194239608 194239805 -5390345 - L1MC4 LINE L1 -139 7903 7709 2171 71 7 17 chr5 194239831 194240126 -5390024 - AluY SINE Alu -3 308 17 296 79 0 0 chr5 194240126 194240164 -5389986 - AluY SINE Alu -263 38 1 2795 118 7 0 chr5 194240166 194240581 -5389569 + L1PB1 LINE L1 5732 6149 -2 1241 166 5 5 chr5 194241009 194241220 -5388930 - AluJb SINE Alu -10 302 92 2079 110 0 7 chr5 194241457 194241749 -5388401 - AluSg SINE Alu -20 290 1 738 93 84 0 chr5 194241749 194241856 -5388294 - AluSq/x SINE Alu -196 117 2 835 90 0 0 chr5 194241924 194242035 -5388115 - AluSx SINE Alu -10 299 189 1015 97 0 0 chr5 194242037 194242171 -5387979 - AluSx SINE Alu -179 134 1 2189 113 0 0 chr5 194242475 194242777 -5387373 - AluSq SINE Alu -11 302 1 2209 110 0 0 chr5 194242973 194243282 -5386868 - AluSg SINE Alu -1 309 1 2237 96 3 10 chr5 194243438 194243751 -5386399 - AluSp SINE Alu -2 311 1 2024 118 3 10 chr5 194243993 194244290 -5385860 + AluSq SINE Alu 1 295 -18 203 339 25 32 chr5 194244557 194244682 -5385468 - MIR SINE MIR -68 140 21 593 245 101 46 chr5 194244814 194244902 -5385248 - MIR SINE MIR 0 262 180 2099 103 26 0 chr5 194244902 194245204 -5384946 - AluSx SINE Alu -2 310 1 593 245 101 46 chr5 194245204 194245352 -5384798 - MIR SINE MIR -82 180 13 971 209 17 0 chr5 194246265 194246437 -5383713 + FAM SINE Alu 1 175 0 226 0 0 56 chr5 194246531 194246567 -5383583 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 802 130 9 0 chr5 194246624 194246739 -5383411 + AluSq/x SINE Alu 2 117 -196 26 50 0 0 chr5 194246739 194246779 -5383371 + AT_rich Low_complexity Low_complexity 1 40 0 213 216 0 0 chr5 194246822 194246859 -5383291 + polypyrimidine Low_complexity Low_complexity 3 39 0 748 170 42 3 chr5 194247700 194247858 -5382292 - L1ME2 LINE L1 0 6317 6018 1667 158 68 0 chr5 194247903 194248182 -5381968 - AluJb SINE Alu -14 298 1 785 264 123 35 chr5 194248244 194248766 -5381384 + L1ME4a LINE L1 5543 6110 -11 311 328 29 63 chr5 194248778 194248874 -5381276 - L1ME LINE L1 -352 5769 5680 1577 180 47 7 chr5 194248874 194249174 -5380976 - AluJo SINE Alu 0 312 1 311 328 29 63 chr5 194249174 194249251 -5380899 - L1ME LINE L1 -441 5680 5602 828 174 0 0 chr5 194249719 194249851 -5380299 - FLAM_A SINE Alu 0 133 2 1970 124 10 3 chr5 194250239 194250538 -5379612 + AluSx SINE Alu 1 301 -11 1986 100 31 53 chr5 194251202 194251521 -5378629 + AluSx SINE Alu 1 312 0 479 330 17 22 chr5 194251521 194251700 -5378450 + MIR SINE MIR 73 250 -12 348 272 49 0 chr5 194252702 194252783 -5377367 + L2 LINE L2 3181 3265 -7 242 337 82 50 chr5 194253134 194253641 -5376509 - L2 LINE L2 -74 3239 2715 832 176 28 0 chr5 194254307 194254449 -5375701 - MER3 DNA MER1_type -62 147 2 2424 74 0 0 chr5 194255742 194256053 -5374097 - AluY SINE Alu 0 311 1 1878 140 0 47 chr5 194256238 194256560 -5373590 + AluSx SINE Alu 2 308 -4 2062 103 3 3 chr5 194257376 194257668 -5372482 + AluSx SINE Alu 16 307 -5 1076 82 0 0 chr5 194257806 194257941 -5372209 + AluSq/x SINE Alu 1 135 -178 2160 117 0 0 chr5 194257941 194258248 -5371902 + AluSx SINE Alu 1 307 -5 1877 139 10 0 chr5 194258601 194258904 -5371246 + AluJb SINE Alu 1 306 -6 242 303 72 66 chr5 194259063 194259215 -5370935 + L2 LINE L2 3119 3271 -1 219 324 70 0 chr5 194260036 194260107 -5370043 - MER91C DNA MER1_type -32 108 33 821 143 0 50 chr5 194260212 194260352 -5369798 + AluJo SINE Alu 1 133 -169 271 293 94 9 chr5 194260367 194260473 -5369677 + MIR SINE MIR 114 228 -34 910 230 135 78 chr5 194260619 194260865 -5369285 + MER77 LTR ERV1 81 312 -293 3795 174 43 26 chr5 194260865 194261173 -5368977 - MER44D DNA MER2_type -1882 605 304 2164 93 0 3 chr5 194261173 194261464 -5368686 - AluSg SINE Alu -12 298 9 3795 174 43 26 chr5 194261464 194261875 -5368275 - MER44D DNA MER2_type -2183 304 2 910 230 135 78 chr5 194261875 194261985 -5368165 + MER77 LTR ERV1 312 414 -191 2036 125 7 0 chr5 194261985 194262288 -5367862 - AluSg SINE Alu -5 305 1 910 230 135 78 chr5 194262288 194262415 -5367735 + MER77 LTR ERV1 414 590 -15 1294 178 25 38 chr5 194262543 194262863 -5367287 + L1M4 LINE L1 4877 5192 -954 825 230 0 0 chr5 194262866 194263027 -5367123 + AluJo SINE Alu 141 301 -1 802 54 144 0 chr5 194263053 194263164 -5366986 + AluSc SINE Alu 1 127 -182 207 0 0 0 chr5 194263164 194263187 -5366963 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2000 189 55 6 chr5 194263190 194263269 -5366881 + L1M4 LINE L1 5174 5248 -936 1644 180 0 24 chr5 194263269 194263563 -5366587 + AluJb SINE Alu 3 289 -23 1885 127 24 0 chr5 194263571 194263862 -5366288 + AluSq SINE Alu 1 298 -15 2000 189 55 6 chr5 194263862 194264261 -5365889 + L1M4 LINE L1 5254 5692 -492 819 157 43 0 chr5 194264265 194264405 -5365745 + FRAM SINE Alu 1 146 -30 2316 75 0 0 chr5 194264415 194264707 -5365443 - AluY SINE Alu -19 292 1 2202 103 6 3 chr5 194264737 194265049 -5365101 + AluSq SINE Alu 1 313 0 210 207 115 115 chr5 194265080 194265116 -5365034 + L2 LINE L2 3139 3174 -139 1509 30 10 41 chr5 194265116 194265313 -5364837 - L1PA7 LINE L1 -3 6151 5961 210 207 115 115 chr5 194265313 194265370 -5364780 + L2 LINE L2 3174 3230 -83 1729 192 0 0 chr5 194265370 194265667 -5364483 + AluJo SINE Alu 1 297 -15 210 207 115 115 chr5 194265667 194265746 -5364404 + L2 LINE L2 3229 3312 -1 308 150 33 0 chr5 194265875 194265935 -5364215 + L1M4 LINE L1 3922 3983 -2163 379 205 39 26 chr5 194265955 194266033 -5364117 - L2 LINE L2 -49 3264 3186 2132 99 7 0 chr5 194266088 194266380 -5363770 + AluSx SINE Alu 1 294 -18 975 148 143 19 chr5 194267247 194267456 -5362694 + MER46A DNA MER2_type 1 235 -1 1771 154 0 7 chr5 194267596 194267881 -5362269 - AluJb SINE Alu -21 291 9 253 321 73 37 chr5 194268039 194268148 -5362002 - L2 LINE L2 0 3313 3201 233 325 111 26 chr5 194268210 194268327 -5361823 + MIR SINE MIR 25 151 -57 931 97 0 8 chr5 194268696 194268830 -5361320 + AluSq/x SINE Alu 1 133 -179 1854 121 0 41 chr5 194268838 194268975 -5361175 + AluSc SINE Alu 1 142 -167 2448 53 3 0 chr5 194268975 194269278 -5360872 + AluY SINE Alu 1 304 -7 1854 121 0 41 chr5 194269278 194269455 -5360695 + AluSc SINE Alu 142 302 -7 180 263 21 84 chr5 194269553 194269648 -5360502 + L2 LINE L2 3151 3239 -74 1718 153 3 29 chr5 194269794 194270108 -5360042 - AluJb SINE Alu -4 308 3 309 270 22 34 chr5 194270192 194270281 -5359869 + MER5B DNA MER1_type 87 174 -4 2029 100 31 0 chr5 194270298 194270589 -5359561 - AluSq SINE Alu -13 300 1 1459 169 39 21 chr5 194270652 194270931 -5359219 + AluJb SINE Alu 1 284 -18 213 222 14 56 chr5 194271208 194271280 -5358870 - L2 LINE L2 -84 3229 3161 633 226 27 27 chr5 194271328 194271474 -5358676 - L2 LINE L2 -245 3068 2923 6605 159 102 91 chr5 194271477 194272181 -5357969 + L1MC3 LINE L1 6097 6792 -993 820 168 0 8 chr5 194272181 194272312 -5357838 + FLAM_C SINE Alu 2 131 -12 6605 159 102 91 chr5 194272312 194273148 -5357002 + L1MC3 LINE L1 6792 7785 0 676 139 0 9 chr5 194273340 194273448 -5356702 - FLAM_C SINE Alu 0 143 37 786 147 0 44 chr5 194273501 194273637 -5356513 + AluJo/FLAM SINE Alu 2 131 -171 2019 96 0 53 chr5 194273639 194273942 -5356208 + AluSg SINE Alu 1 287 -23 200 230 0 138 chr5 194274091 194274178 -5355972 + L2 LINE L2 2896 2970 -343 1047 244 9 16 chr5 194274179 194274470 -5355680 - L1MC4 LINE L1 -203 7792 7414 313 137 0 0 chr5 194274472 194274523 -5355627 - L1MC4a LINE L1 -540 7268 7218 1477 109 0 5 chr5 194274939 194275140 -5355010 - AluSg/x SINE Alu -28 282 83 771 142 0 0 chr5 194276511 194276617 -5353533 - FRAM SINE Alu -53 123 18 2013 116 0 3 chr5 194276625 194276927 -5353223 - AluSx SINE Alu -11 301 1 230 318 94 0 chr5 194276934 194277019 -5353131 - MIR SINE MIR -10 252 160 235 262 39 87 chr5 194278273 194278341 -5351809 + MIR SINE MIR 79 142 -120 2008 90 24 7 chr5 194278341 194278629 -5351521 + AluSg SINE Alu 1 293 -17 235 262 39 87 chr5 194278629 194278663 -5351487 + MIR SINE MIR 142 176 -86 1158 109 0 0 chr5 194278703 194278859 -5351291 + AluSx SINE Alu 26 181 -131 790 100 0 18 chr5 194278959 194279069 -5351081 + MER4A LTR ERV1 556 663 -1 2940 98 261 11 chr5 194279073 194279622 -5350528 + MER4A-int LTR ERV1 1 686 -5912 1051 83 0 93 chr5 194279780 194279953 -5350197 - AluSg/x SINE Alu -16 296 141 2103 127 0 0 chr5 194279953 194280260 -5349890 - AluSx SINE Alu -5 307 1 1051 83 0 93 chr5 194280260 194280279 -5349871 - AluSg/x SINE Alu -171 141 122 6872 62 9 0 chr5 194280302 194281476 -5348674 - L1PA6 LINE L1 -7 6147 4967 342 263 118 41 chr5 194281476 194281648 -5348502 - L1MEc LINE L1 -5353 912 603 226 372 22 27 chr5 194281906 194282089 -5348061 - L1MEc LINE L1 -5950 446 265 2859 163 36 22 chr5 194282321 194282819 -5347331 - Tigger7 DNA MER2_type -228 505 1 2365 72 0 0 chr5 194282963 194283267 -5346883 + AluY SINE Alu 1 304 -7 833 269 47 27 chr5 194283317 194283364 -5346786 + L1MC4 LINE L1 6699 6744 -1298 2061 121 0 13 chr5 194283364 194283669 -5346481 + AluSx SINE Alu 1 301 -11 833 269 47 27 chr5 194283669 194283919 -5346231 + L1MC4 LINE L1 6744 7002 -1040 992 143 0 0 chr5 194283928 194284082 -5346068 + FRAM SINE Alu 1 151 -25 1004 174 78 48 chr5 194284104 194284260 -5345890 - L1M4 LINE L1 -1246 4900 4731 2175 108 0 0 chr5 194284260 194284565 -5345585 + AluSc SINE Alu 5 309 0 1004 174 78 48 chr5 194284565 194284678 -5345472 - L1M4 LINE L1 -1415 4731 4623 29 0 0 0 chr5 194284686 194284715 -5345435 + AT_rich Low_complexity Low_complexity 1 29 0 6589 82 17 22 chr5 194284715 194285856 -5344294 - SVA Other Other -761 1372 433 2126 78 0 27 chr5 194286214 194286508 -5343642 - AluSx SINE Alu -26 286 1 240 286 14 14 chr5 194286512 194286582 -5343568 - MIR SINE MIR -17 245 176 224 322 61 26 chr5 194286563 194286678 -5343472 - MIR3 SINE MIR -43 165 47 * 422 275 33 0 chr5 194286937 194287057 -5343093 + MER94 DNA DNA 11 134 0 411 293 263 0 chr5 194287300 194287505 -5342645 + MIR SINE MIR 4 262 0 326 329 89 38 chr5 194287571 194287625 -5342525 + MIR SINE MIR 4 54 -208 1914 143 0 10 chr5 194287625 194287925 -5342225 - AluJb SINE Alu -13 299 3 326 329 89 38 chr5 194287925 194288068 -5342082 + MIR SINE MIR 54 217 -45 2182 122 0 0 chr5 194288068 194288371 -5341779 + AluSx SINE Alu 1 303 -9 326 329 89 38 chr5 194288371 194288409 -5341741 + MIR SINE MIR 217 252 -10 405 211 175 70 chr5 194289485 194289656 -5340494 + L2 LINE L2 3077 3265 -7 * 784 296 108 35 chr5 194289632 194290248 -5339902 - L2 LINE L2 -7 3265 2564 340 71 73 18 chr5 194290248 194290316 -5339834 + Alu SINE Alu 241 295 -7 2154 97 0 23 chr5 194290327 194290636 -5339514 + AluSq SINE Alu 5 306 -7 6743 103 24 21 chr5 194292444 194292899 -5337251 + PABL_A-int LTR ERV1 3562 4014 -1001 2174 101 3 0 chr5 194292899 194293196 -5336954 + AluSp SINE Alu 5 302 -11 6743 103 24 21 chr5 194293196 194293794 -5336356 + PABL_A-int LTR ERV1 4014 4618 -397 2106 125 0 3 chr5 194293802 194294113 -5336037 - AluSx SINE Alu -2 310 1 397 191 22 34 chr5 194294113 194294193 -5335957 + L1MEc LINE L1 128 208 -6188 818 101 67 0 chr5 194294407 194294526 -5335624 + FLAM_C SINE Alu 9 135 -8 999 157 79 0 chr5 194294604 194294782 -5335368 + LTR47A LTR ERVL 261 452 0 2415 80 3 0 chr5 194294804 194295116 -5335034 - AluSp SINE Alu 0 313 1 302 312 51 7 chr5 194295117 194295255 -5334895 + L1MEc LINE L1 223 366 -6030 232 260 14 41 chr5 194295386 194295459 -5334691 + MIR SINE MIR 186 256 -6 2106 53 42 11 chr5 194295616 194295900 -5334250 + AluSc SINE Alu 1 293 -16 499 279 85 30 chr5 194296448 194296649 -5333501 + MIR SINE MIR 28 239 -23 2301 65 7 0 chr5 194296868 194297162 -5332988 - AluSq SINE Alu -17 296 1 308 263 30 10 chr5 194298515 194298614 -5331536 - MIR SINE MIR -127 135 35 222 233 22 56 chr5 194298627 194298717 -5331433 - MIR SINE MIR -87 121 35 2235 80 30 0 chr5 194299226 194299525 -5330625 + AluSx SINE Alu 1 308 -4 2106 77 0 51 chr5 194299597 194299909 -5330241 + AluY SINE Alu 6 301 -10 534 149 149 9 chr5 194300017 194300131 -5330019 - FLAM_C SINE Alu -3 130 1 1233 116 121 0 chr5 194300533 194300731 -5329419 - AluSq SINE Alu -87 226 5 195 129 0 0 chr5 194300995 194301026 -5329124 + (CA)n Simple_repeat Simple_repeat 2 32 0 180 295 16 16 chr5 194301395 194301456 -5328694 + MIR SINE MIR 111 171 -91 237 241 133 0 chr5 194303626 194303709 -5326441 - MIR SINE MIR -118 144 51 891 135 0 0 chr5 194303737 194303870 -5326280 - FLAM_C SINE Alu 0 133 1 327 159 217 0 chr5 194304373 194304442 -5325708 - L2 LINE L2 -4 3268 3185 388 272 8 32 chr5 194304505 194304630 -5325520 - MIR SINE MIR -67 141 20 1397 112 5 54 chr5 194304641 194304864 -5325286 + AluJb SINE Alu 87 298 -14 2661 50 3 0 chr5 194307101 194307403 -5322747 - AluY SINE Alu -8 303 1 641 269 191 15 chr5 194307570 194307905 -5322245 - L2 LINE L2 0 3313 2920 285 326 21 21 chr5 194308123 194308264 -5321886 - L2 LINE L2 0 3272 3132 368 261 94 29 chr5 194308686 194308824 -5321326 + MIR SINE MIR 74 220 -42 933 89 8 8 chr5 194309045 194309169 -5320981 - AluSq/x SINE Alu -187 125 2 2129 115 14 0 chr5 194309820 194310108 -5320042 + AluSx SINE Alu 1 292 -20 228 286 48 38 chr5 194311603 194311708 -5318442 - MIR SINE MIR -63 145 40 1965 124 13 19 chr5 194311919 194312233 -5317917 - AluJo SINE Alu 0 312 1 503 291 84 41 chr5 194312660 194312980 -5317170 + L1MC4 LINE L1 7587 7920 -122 1466 82 6 6 chr5 194313017 194313200 -5316950 - AluSp SINE Alu -129 184 2 225 263 21 32 chr5 194313203 194313298 -5316852 - MIR SINE MIR -55 207 114 234 122 143 0 chr5 194313361 194313410 -5316740 - MIR SINE MIR -142 120 65 204 143 0 0 chr5 194313400 194313442 -5316708 - L2 LINE L2 -337 2977 2936 * 221 255 28 92 chr5 194314750 194314891 -5315259 - L2 LINE L2 -484 2830 2699 200 297 22 0 chr5 194315004 194315095 -5315055 + CT-rich Low_complexity Low_complexity 5 97 0 2418 88 0 0 chr5 194315482 194315778 -5314372 - AluSq SINE Alu -17 296 1 312 197 40 0 chr5 194317567 194317643 -5312507 - MER103 DNA DNA -50 116 38 507 264 0 19 chr5 194317871 194318026 -5312124 - L2 LINE L2 -252 3061 2910 245 318 47 0 chr5 194318847 194318932 -5311218 - MIR SINE MIR -78 184 96 983 217 68 43 chr5 194319218 194319499 -5310651 - MLT1C LTR MaLR -2 465 178 1811 195 7 0 chr5 194319500 194319797 -5310353 - AluJb SINE Alu -13 299 1 259 105 158 35 chr5 194319797 194319854 -5310296 - MLT1C LTR MaLR -390 77 14 2114 87 3 61 chr5 194320382 194320693 -5309457 + AluSx SINE Alu 1 293 -19 205 219 78 16 chr5 194321092 194321156 -5308994 + MIR SINE MIR 70 137 -125 2564 71 0 0 chr5 194321171 194321482 -5308668 - AluSx SINE Alu -1 311 1 2611 66 0 0 chr5 194321545 194321847 -5308303 + AluY SINE Alu 1 302 -9 1772 83 0 0 chr5 194322657 194322897 -5307253 - AluSg SINE Alu 0 307 68 2687 50 0 0 chr5 194322897 194323197 -5306953 - AluY SINE Alu -9 302 2 585 91 0 0 chr5 194323198 194323275 -5306875 - AluSg SINE Alu -232 78 2 2183 104 28 0 chr5 194323278 194323567 -5306583 - AluSx SINE Alu -15 297 1 922 165 21 86 chr5 194324563 194324674 -5305476 - L1MB7 LINE L1 -20 6164 6047 195 42 0 0 chr5 194324674 194324698 -5305452 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2125 113 18 0 chr5 194324698 194324973 -5305177 - AluSx SINE Alu -28 284 5 922 165 21 86 chr5 194324973 194325103 -5305047 - L1MB7 LINE L1 -135 6049 5938 337 216 81 0 chr5 194325568 194325669 -5304481 + MIR SINE MIR 45 152 -63 948 155 81 0 chr5 194325865 194326026 -5304124 + AluJb SINE Alu 130 303 -9 245 155 0 99 chr5 194326308 194326379 -5303771 - AluSg/x SINE Alu -81 221 158 663 144 36 72 chr5 194327249 194327388 -5302762 + MER5A DNA MER1_type 1 134 -55 210 100 250 0 chr5 194328171 194328211 -5301939 + MIR SINE MIR 59 108 -154 213 65 0 0 chr5 194328365 194328396 -5301754 + (T)n Simple_repeat Simple_repeat 1 31 0 2143 137 0 0 chr5 194328767 194329067 -5301083 - AluSg SINE Alu -4 306 7 2429 71 3 3 chr5 194329195 194329491 -5300659 - AluY SINE Alu -15 296 1 1934 115 42 14 chr5 194330264 194330550 -5299600 + AluSx SINE Alu 1 294 -18 346 278 98 38 chr5 194330729 194330862 -5299288 - MIR SINE MIR -64 198 58 2381 102 0 0 chr5 194330878 194331183 -5298967 - AluSx SINE Alu -7 305 1 646 188 68 0 chr5 194331267 194331400 -5298750 - FLAM_C SINE Alu 0 143 2 1487 145 9 0 chr5 194331638 194331859 -5298291 - AluJo SINE Alu -4 308 86 2241 114 0 10 chr5 194332046 194332344 -5297806 - AluSx SINE Alu -17 295 1 2207 142 3 0 chr5 194332510 194332820 -5297330 - AluSq SINE Alu -2 311 1 1106 148 19 0 chr5 194332864 194333026 -5297124 + AluSg/x SINE Alu 134 298 -14 185 403 8 45 chr5 194333061 194333195 -5296955 + MIR SINE MIR 19 147 -61 282 56 0 0 chr5 194334272 194334308 -5295842 + (T)n Simple_repeat Simple_repeat 1 36 0 1575 147 98 11 chr5 194334476 194334762 -5295388 - AluSq SINE Alu -2 311 1 210 286 179 0 chr5 194334889 194335001 -5295149 + MIR SINE MIR 120 251 -11 2151 147 0 0 chr5 194335037 194335336 -5294814 + AluSq SINE Alu 1 299 -14 233 255 149 21 chr5 194335379 194335457 -5294693 - L2 LINE L2 0 3313 3220 2429 86 0 0 chr5 194335457 194335759 -5294391 + AluY SINE Alu 1 302 -9 233 255 149 21 chr5 194335759 194335774 -5294376 - L2 LINE L2 -93 3220 3208 1501 182 10 39 chr5 194335805 194336112 -5294038 + AluJo SINE Alu 1 298 -14 2327 114 0 13 chr5 194336117 194336432 -5293718 + AluSx SINE Alu 1 311 -1 372 313 82 10 chr5 194336730 194336925 -5293225 + L1ME LINE L1 5543 5751 -370 2289 91 3 3 chr5 194337450 194337757 -5292393 + AluSp SINE Alu 1 307 -6 216 0 0 0 chr5 194338813 194338837 -5291313 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2296 88 0 0 chr5 194338889 194339195 -5290955 + AluSx SINE Alu 1 306 0 805 189 0 0 chr5 194339408 194339535 -5290615 + FRAM SINE Alu 3 129 -47 2322 92 0 19 chr5 194339633 194339948 -5290202 - AluY SINE Alu -2 309 1 1383 187 13 79 chr5 194340082 194340234 -5289916 + AluJb SINE Alu 1 123 -191 2141 101 39 3 chr5 194340234 194340520 -5289630 + AluY SINE Alu 1 296 -15 1383 187 13 79 chr5 194340520 194340701 -5289449 + AluJb SINE Alu 123 314 0 554 112 84 28 chr5 194340785 194340892 -5289258 + L1MA8 LINE L1 6145 6257 -34 2242 123 0 0 chr5 194341007 194341309 -5288841 + AluSq SINE Alu 1 302 -11 2223 84 0 11 chr5 194341499 194341835 -5288315 - AluY SINE Alu 0 333 1 2144 120 3 3 chr5 194341838 194342137 -5288013 - AluSx SINE Alu -13 299 1 201 176 0 0 chr5 194342137 194342171 -5287979 + T-rich Low_complexity Low_complexity 1 34 0 1197 159 0 6 chr5 194342172 194342354 -5287796 - AluJb SINE Alu 0 312 132 197 59 59 0 chr5 194342355 194342389 -5287761 + T-rich Low_complexity Low_complexity 5 40 0 3646 73 34 0 chr5 194342389 194342895 -5287255 - L1PA8 LINE L1 -25 6147 5625 653 214 7 14 chr5 194342895 194343040 -5287110 - AluJb SINE Alu -166 146 3 388 173 78 16 chr5 194343077 194343162 -5286988 + FLAM SINE Alu 47 127 -6 579 49 62 0 chr5 194343170 194343251 -5286899 + AluY SINE Alu 209 294 -17 791 354 36 18 chr5 194343415 194343864 -5286286 + ERVL LTR ERVL 4910 5366 -398 1586 201 13 65 chr5 194344407 194344635 -5285515 + MER101 LTR ERV1 9 202 -272 2226 168 23 16 chr5 194344635 194345064 -5285086 + MSTB1 LTR MaLR 1 432 0 1586 201 13 65 chr5 194345064 194345298 -5284852 + MER101 LTR ERV1 202 447 -27 2325 104 0 0 chr5 194345311 194345609 -5284541 + AluSx SINE Alu 1 298 -14 183 42 0 0 chr5 194345623 194345647 -5284503 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2029 140 0 23 chr5 194345660 194345826 -5284324 + AluJb SINE Alu 1 158 -154 2368 109 56 0 chr5 194345826 194346183 -5283967 + MER51B LTR ERV1 1 377 0 2029 140 0 23 chr5 194346183 194346324 -5283826 + AluJb SINE Alu 158 301 -11 1314 240 3 24 chr5 194346330 194346618 -5283532 - AluJb SINE Alu -30 282 1 284 79 32 48 chr5 194347095 194347158 -5282992 + Alu SINE Alu 240 301 -1 2224 99 3 3 chr5 194347277 194347569 -5282581 - AluSp SINE Alu -21 292 1 448 183 24 0 chr5 194347624 194347706 -5282444 + L2 LINE L2 3184 3267 -5 404 319 0 21 chr5 194347744 194347885 -5282265 + MIR SINE MIR 6 143 -119 753 161 0 0 chr5 194347885 194348003 -5282147 + FLAM_C SINE Alu 1 118 -15 2017 110 65 10 chr5 194348037 194348327 -5281823 + AluSx SINE Alu 1 306 -6 2170 126 3 19 chr5 194348335 194348653 -5281497 + AluSq SINE Alu 1 313 0 216 355 33 0 chr5 194348653 194348774 -5281376 + MIR SINE MIR 138 262 0 396 145 243 1 chr5 194348779 194348899 -5281251 - MIR3 SINE MIR -63 145 14 186 118 0 0 chr5 194349385 194349419 -5280731 + (CAGGG)n Simple_repeat Simple_repeat 2 35 0 199 235 0 0 chr5 194349821 194349872 -5280278 - L2 LINE L2 -3 3269 3219 213 311 27 0 chr5 194350230 194350304 -5279846 + L2 LINE L2 2458 2533 -781 2281 108 16 0 chr5 194350446 194350753 -5279397 + AluSx SINE Alu 1 312 0 2337 97 0 0 chr5 194351543 194351843 -5278307 - AluSx SINE Alu -12 300 1 2400 91 3 0 chr5 194351938 194352245 -5277905 - AluSg SINE Alu -2 308 1 933 164 0 6 chr5 194352247 194352406 -5277744 - AluSg/x SINE Alu -6 304 147 1849 126 14 3 chr5 194352263 194352548 -5277602 - AluSg SINE Alu -22 288 1 303 261 159 11 chr5 194352553 194352641 -5277509 - MIR SINE MIR -110 152 52 370 262 98 8 chr5 194352929 194353051 -5277099 - MIR3 SINE MIR -65 143 11 995 212 15 20 chr5 194353567 194353765 -5276385 - MER57A-int LTR ERV1 -7338 199 3 898 216 153 66 chr5 194353768 194354101 -5276049 - MER57A LTR ERV1 0 403 42 548 150 24 71 chr5 194354989 194355116 -5275034 + AluJb SINE Alu 168 288 -24 1585 137 66 4 chr5 194356857 194357128 -5273022 + AluJb SINE Alu 3 290 -22 264 253 219 41 chr5 194357137 194357283 -5272867 - Charlie8 DNA MER1_type -2132 285 114 244 148 19 37 chr5 194357278 194357332 -5272818 + Alu SINE Alu 248 300 0 * 185 261 138 0 chr5 194357909 194357974 -5272176 + MIR3 SINE MIR 95 168 -40 996 121 82 6 chr5 194358355 194358537 -5271613 + L1MB2 LINE L1 5974 6169 -2 320 202 181 11 chr5 194359044 194359138 -5271012 + MIR3 SINE MIR 74 183 -25 1566 149 16 0 chr5 194359422 194359671 -5270479 - AluSx SINE Alu -7 305 53 259 276 172 0 chr5 194359699 194359786 -5270364 + L2 LINE L2 3212 3313 0 816 168 99 0 chr5 194360028 194360189 -5269961 + AluSx SINE Alu 53 229 -83 201 252 45 27 chr5 194361362 194361473 -5268677 + (CGGAG)n Simple_repeat Simple_repeat 1 113 0 2294 83 3 0 chr5 194362244 194362545 -5267605 + AluSp SINE Alu 1 302 -11 1279 195 19 11 chr5 194362548 194362809 -5267341 - AluJb SINE Alu -49 263 1 636 259 117 68 chr5 194362894 194362971 -5267179 - L1ME4a LINE L1 -95 6026 5954 1904 134 10 0 chr5 194362971 194363263 -5266887 - AluSq SINE Alu -18 295 1 636 259 117 68 chr5 194363263 194363396 -5266754 - L1ME4a LINE L1 -167 5954 5829 2151 111 3 3 chr5 194363396 194363703 -5266447 - AluSq SINE Alu -6 307 1 636 259 117 68 chr5 194363703 194363885 -5266265 - L1ME4a LINE L1 -292 5829 5614 1826 158 0 7 chr5 194364421 194364719 -5265431 + AluJb SINE Alu 1 296 -16 1722 106 63 50 chr5 194364721 194365024 -5265126 + AluSx SINE Alu 3 309 -3 1886 84 7 21 chr5 194366048 194366335 -5263815 + AluSx SINE Alu 30 312 0 1174 123 0 6 chr5 194366337 194366516 -5263634 + AluSg/x SINE Alu 132 309 0 1310 131 0 57 chr5 194367146 194367375 -5262775 + AluJb SINE Alu 85 300 -12 2133 110 3 0 chr5 194367376 194367676 -5262474 + AluSx SINE Alu 1 301 -11 2206 88 0 0 chr5 194367995 194368280 -5261870 - AluSq SINE Alu -28 285 1 754 125 97 57 chr5 194368280 194368456 -5261694 + L1MC/D LINE L1 5262 5444 -2341 465 149 27 0 chr5 194368462 194368536 -5261614 - AluJ/FLAM SINE Alu -235 77 2 2009 119 3 7 chr5 194369096 194369399 -5260751 - AluSq SINE Alu -11 302 1 198 0 0 0 chr5 194369562 194369584 -5260566 + (TG)n Simple_repeat Simple_repeat 2 23 0 217 132 19 19 chr5 194369957 194370010 -5260140 + CT-rich Low_complexity Low_complexity 3 55 0 1599 176 0 0 chr5 194370022 194370289 -5259861 - AluSx SINE Alu -45 267 1 2202 88 20 7 chr5 194370306 194370611 -5259539 - AluSg SINE Alu -1 309 1 223 271 0 0 chr5 194370976 194371024 -5259126 + L2 LINE L2 3264 3311 -2 1664 136 0 22 chr5 194371158 194371430 -5258720 - AluJo SINE Alu -4 308 43 262 259 17 0 chr5 194371528 194371586 -5258564 + MIR SINE MIR 84 142 -120 4860 140 6 16 chr5 194371629 194372415 -5257735 - L1PA16 LINE L1 -2 6164 5387 360 0 0 0 chr5 194372421 194372461 -5257689 + (TG)n Simple_repeat Simple_repeat 2 41 0 476 186 47 0 chr5 194372462 194372548 -5257602 - AluSg/x SINE Alu -17 293 204 1270 186 4 32 chr5 194372587 194372866 -5257284 + AluSx SINE Alu 11 281 -31 2009 143 0 3 chr5 194372937 194373245 -5256905 - AluSx SINE Alu -5 307 1 1380 207 3 32 chr5 194373245 194373558 -5256592 - AluJo SINE Alu -7 305 1 1329 174 46 16 chr5 194373570 194373875 -5256275 - L1PA16 LINE L1 -825 5321 5008 1922 150 3 0 chr5 194373925 194374225 -5255925 + AluSx SINE Alu 1 301 -11 2224 86 0 0 chr5 194374280 194374571 -5255579 + AluSc SINE Alu 7 297 -12 306 260 203 6 chr5 194375573 194375701 -5254449 - MIR SINE MIR -69 193 36 1735 121 31 4 chr5 194376038 194376295 -5253855 - AluSx SINE Alu -48 264 1 205 267 17 33 chr5 194376298 194376358 -5253792 + MER5A DNA MER1_type 130 188 -1 2083 117 10 0 chr5 194378191 194378500 -5251650 + AluSx SINE Alu 1 312 0 28 0 0 0 chr5 194380009 194380037 -5250113 + AT_rich Low_complexity Low_complexity 1 28 0 1603 109 168 20 chr5 194380881 194381185 -5248965 + MSTA LTR MaLR 43 391 -37 180 0 0 0 chr5 194381185 194381205 -5248945 + (TG)n Simple_repeat Simple_repeat 2 21 0 601 78 0 0 chr5 194381207 194381284 -5248866 - AluS SINE Alu -235 78 2 1156 248 92 52 chr5 194381292 194381577 -5248573 + L1MC4 LINE L1 7460 7732 -310 1981 116 0 10 chr5 194381577 194381906 -5248244 + AluSx SINE Alu 1 312 0 1156 248 92 52 chr5 194381906 194382164 -5247986 + L1MC4 LINE L1 7732 8025 -17 469 317 144 34 chr5 194382688 194383076 -5247074 - L2 LINE L2 -5 3308 2878 415 195 24 0 chr5 194383079 194383161 -5246989 + MSTD LTR MaLR 233 316 -80 270 0 0 0 chr5 194383897 194383927 -5246223 + (CAT)n Simple_repeat Simple_repeat 3 32 0 598 329 197 16 chr5 194383929 194384510 -5245640 + L2 LINE L2 2323 3008 -305 1595 114 0 0 chr5 194384513 194384741 -5245409 - AluSg/x SINE Alu -12 298 71 2179 95 0 7 chr5 194385598 194385893 -5244257 - AluSg SINE Alu -17 293 1 408 262 151 23 chr5 194385996 194386168 -5243982 - MIR SINE MIR -49 213 20 41 36 0 0 chr5 194386569 194386624 -5243526 + AT_rich Low_complexity Low_complexity 1 55 0 1947 89 0 35 chr5 194386624 194386938 -5243212 - AluY SINE Alu -8 303 1 1999 119 7 0 chr5 194386938 194387231 -5242919 - AluSx SINE Alu -12 300 6 1497 175 5 13 chr5 194387235 194387542 -5242608 + L1MC4a LINE L1 5917 7797 -11 284 136 17 0 chr5 194387601 194387660 -5242490 + L1MD2 LINE L1 6298 6357 -2 2151 91 3 0 chr5 194387668 194387982 -5242168 + AluSp SINE Alu 1 315 0 266 224 123 5 chr5 194387995 194388207 -5241943 + L1MEc LINE L1 2083 2316 -3899 2088 115 7 3 chr5 194388267 194388572 -5241578 - AluSx SINE Alu -6 306 1 276 145 174 29 chr5 194388572 194388641 -5241509 - L1MC4 LINE L1 -100 7942 7864 1404 109 5 5 chr5 194388643 194388844 -5241306 + AluSq SINE Alu 1 201 -112 1648 54 0 0 chr5 194388873 194389077 -5241073 - AluY SINE Alu -15 296 93 4539 204 86 21 chr5 194389184 194389849 -5240301 - L1MC4 LINE L1 -509 7533 6766 2203 107 0 0 chr5 194389849 194390147 -5240003 - AluSx SINE Alu -14 298 1 4539 204 86 21 chr5 194390147 194390597 -5239553 - L1MC4 LINE L1 -1276 6766 6346 1119 204 118 61 chr5 194390650 194390748 -5239402 + L1MD2 LINE L1 5959 6050 -309 2207 61 0 55 chr5 194390748 194391077 -5239073 - AluYb8 SINE Alu -7 311 1 1119 204 118 61 chr5 194391077 194391341 -5238809 + L1MD2 LINE L1 6050 6342 -17 486 264 9 0 chr5 194391415 194391521 -5238629 - FLAM_A SINE Alu -30 112 6 968 209 54 75 chr5 194391531 194391627 -5238523 - L1MC4a LINE L1 -1558 6250 6154 857 79 87 0 chr5 194391627 194391753 -5238397 - MER85 DNA T2_type -2 137 1 968 209 54 75 chr5 194391753 194392044 -5238106 - L1MC4a LINE L1 -1654 6154 5871 734 103 0 0 chr5 194392065 194392162 -5237988 + AluS SINE Alu 2 98 -214 2648 219 29 11 chr5 194392205 194392820 -5237330 + L1M4 LINE L1 3675 4300 -1846 241 266 0 64 chr5 194392865 194392959 -5237191 + L1ME2 LINE L1 6077 6164 0 280 360 21 59 chr5 194393271 194393402 -5236748 + MIR SINE MIR 22 156 -106 2049 139 0 0 chr5 194393402 194393703 -5236447 + AluSx SINE Alu 2 302 -10 280 360 21 59 chr5 194393703 194393733 -5236417 + MIR SINE MIR 156 186 -76 927 124 0 29 chr5 194393733 194393870 -5236280 + FLAM_C SINE Alu 1 133 0 280 360 21 59 chr5 194393870 194393946 -5236204 + MIR SINE MIR 186 251 -11 2339 78 0 3 chr5 194394523 194394534 -5235616 - AluY SINE Alu -3 308 298 180 97 0 0 chr5 194394534 194394565 -5235585 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 2339 78 0 3 chr5 194394565 194394862 -5235288 - AluY SINE Alu -13 298 1 2029 109 3 23 chr5 194394862 194395164 -5234986 - AluSx SINE Alu -12 300 5 354 296 19 37 chr5 194395909 194396017 -5234133 - MIR3 SINE MIR -5 203 98 2376 62 0 7 chr5 194396251 194396560 -5233590 - AluY SINE Alu -3 308 2 459 300 31 31 chr5 194396629 194396789 -5233361 + MIR SINE MIR 36 195 -67 879 150 0 0 chr5 194398240 194398373 -5231777 + FLAM_C SINE Alu 1 133 0 217 351 0 0 chr5 194398476 194398533 -5231617 + L3 LINE CR1 1502 1558 -19 449 254 63 8 chr5 194398680 194398806 -5231344 + HAL1 LINE L1 11 143 -2364 715 65 0 0 chr5 194398811 194398903 -5231247 - AluSc SINE Alu -16 293 202 348 294 32 51 chr5 194398934 194399123 -5231027 + L1ME3A LINE L1 5774 5966 -204 237 135 0 0 chr5 194399220 194399257 -5230893 - Alu SINE Alu -182 120 84 1641 247 103 67 chr5 194399410 194399598 -5230552 + HAL1 LINE L1 164 344 -2163 1564 164 3 14 chr5 194399598 194399923 -5230227 + AluJb SINE Alu 1 322 0 1641 247 103 67 chr5 194399923 194400560 -5229590 + HAL1 LINE L1 344 1020 -1487 790 180 0 0 chr5 194400582 194400710 -5229440 - FLAM_C SINE Alu -5 128 1 930 139 53 0 chr5 194400721 194400872 -5229278 - FRAM SINE Alu -23 153 1 1364 243 120 54 chr5 194400875 194401129 -5229021 + HAL1 LINE L1 1237 1473 -1034 1834 147 0 7 chr5 194401129 194401429 -5228721 - AluJb SINE Alu -14 298 1 1364 243 120 54 chr5 194401429 194401858 -5228292 + HAL1 LINE L1 1473 1965 -542 2595 93 4 41 chr5 194401867 194402437 -5227713 + MER51A LTR ERV1 1 634 0 1194 250 43 5 chr5 194402437 194402805 -5227345 + HAL1 LINE L1 1970 2351 -156 315 180 81 108 chr5 194402999 194403110 -5227040 - L1ME1 LINE L1 -1 6163 6056 1807 157 24 0 chr5 194403249 194403542 -5226608 - AluSx SINE Alu -12 300 1 2105 104 0 66 chr5 194403551 194403868 -5226282 - AluSq SINE Alu -17 296 1 2268 123 0 0 chr5 194404119 194404420 -5225730 - AluSx SINE Alu -11 301 1 2200 142 14 19 chr5 194404797 194404835 -5225315 - MER47A DNA MER2_type -1966 357 320 2142 179 41 7 chr5 194404835 194405253 -5224897 + MSTB1 LTR MaLR 1 432 0 2200 142 14 19 chr5 194405253 194405573 -5224577 - MER47A DNA MER2_type -2003 320 1 26 0 0 0 chr5 194406015 194406041 -5224109 + AT_rich Low_complexity Low_complexity 1 26 0 2234 118 0 0 chr5 194406041 194406328 -5223822 - AluSx SINE Alu -25 287 1 245 246 70 126 chr5 194407043 194407242 -5222908 + MLT1L LTR MaLR 426 613 -2 2241 122 0 0 chr5 194407752 194408056 -5222094 - AluSx SINE Alu -8 304 1 407 234 8 16 chr5 194408141 194408265 -5221885 - HAL1 LINE L1 -136 2371 2249 314 248 28 78 chr5 194408321 194408462 -5221688 - HAL1b LINE L1 -444 904 771 1784 163 3 26 chr5 194408767 194409074 -5221076 + AluJo SINE Alu 1 300 -12 1324 207 35 24 chr5 194409081 194409419 -5220731 - L1MB8 LINE L1 -26 6152 5811 3918 188 50 46 chr5 194409446 194410367 -5219783 - L1MD2 LINE L1 -166 6193 5262 1690 163 28 24 chr5 194410367 194410656 -5219494 - AluJo SINE Alu -22 290 1 3918 188 50 46 chr5 194410656 194411245 -5218905 - L1MD2 LINE L1 -1097 5262 4677 271 208 28 14 chr5 194411622 194411694 -5218456 + MLT1J LTR MaLR 237 309 -202 316 296 19 37 chr5 194413835 194413943 -5216207 - MIR3 SINE MIR -5 203 98 2557 55 0 7 chr5 194414177 194414486 -5215664 - AluY SINE Alu -3 308 2 401 294 14 35 chr5 194414555 194414698 -5215452 + MIR SINE MIR 36 175 -87 875 150 0 0 chr5 194416165 194416298 -5213852 + FLAM_C SINE Alu 1 133 0 196 351 0 0 chr5 194416400 194416457 -5213693 + L3 LINE CR1 1502 1558 -19 460 254 63 8 chr5 194416604 194416730 -5213420 + HAL1 LINE L1 11 143 -2364 709 65 0 0 chr5 194416735 194416827 -5213323 - AluSc SINE Alu -16 293 202 236 135 0 0 chr5 194417144 194417181 -5212969 - Alu SINE Alu -182 120 84 1628 240 105 68 chr5 194417352 194417522 -5212628 + HAL1 LINE L1 182 344 -2163 1677 164 3 14 chr5 194417522 194417847 -5212303 + AluJb SINE Alu 1 322 0 1628 240 105 68 chr5 194417847 194418484 -5211666 + HAL1 LINE L1 344 1020 -1487 748 186 0 0 chr5 194418509 194418633 -5211517 - FLAM_C SINE Alu -18 125 2 966 146 53 0 chr5 194418645 194418796 -5211354 - FRAM SINE Alu -23 153 1 1366 246 122 54 chr5 194418799 194419052 -5211098 + HAL1 LINE L1 1237 1472 -1035 1959 143 0 7 chr5 194419052 194419352 -5210798 - AluJb SINE Alu -14 298 1 1366 246 122 54 chr5 194419352 194419781 -5210369 + HAL1 LINE L1 1472 1965 -542 2593 93 4 41 chr5 194419790 194420360 -5209790 + MER51A LTR ERV1 1 634 0 1194 250 43 5 chr5 194420360 194420728 -5209422 + HAL1 LINE L1 1970 2351 -156 321 164 91 109 chr5 194420922 194421032 -5209118 - L1ME1 LINE L1 -1 6163 6056 1807 157 24 0 chr5 194421171 194421464 -5208686 - AluSx SINE Alu -12 300 1 2338 105 0 0 chr5 194421473 194421769 -5208381 - AluSq SINE Alu -17 296 1 275 155 403 16 chr5 194421771 194421840 -5208310 + L1MC4 LINE L1 7864 7905 -137 2223 105 7 3 chr5 194421840 194422135 -5208015 + AluSx SINE Alu 1 296 -16 275 155 403 16 chr5 194422135 194422194 -5207956 + L1MC4 LINE L1 7905 8042 0 296 221 164 4 chr5 194422204 194422416 -5207734 - L1MEc LINE L1 -3899 2316 2083 470 115 0 0 chr5 194422429 194422519 -5207631 - AluSp/q SINE Alu 0 315 226 1385 212 83 0 chr5 194422792 194423118 -5207032 - L1ME1 LINE L1 -341 5825 5473 2355 80 0 3 chr5 194423146 194423435 -5206715 + AluY SINE Alu 1 288 -23 830 152 35 6 chr5 194423436 194423607 -5206543 - L1MB2 LINE L1 -7 6400 6225 1630 162 36 13 chr5 194423607 194423915 -5206235 - L1MB2 LINE L1 -592 5815 5501 4673 126 16 91 chr5 194423919 194424948 -5205202 - SVA Other Other -2 1384 433 1410 173 6 165 chr5 194424965 194425481 -5204669 - SVA Other Other -520 866 433 5411 80 28 59 chr5 194425548 194426625 -5203525 - SVA Other Other -518 868 72 297 0 0 0 chr5 194426625 194426658 -5203492 + (GGGAGA)n Simple_repeat Simple_repeat 3 35 0 2158 209 58 55 chr5 194426661 194427251 -5202899 - L1MB2 LINE L1 -866 5516 4922 2291 88 27 0 chr5 194427251 194427546 -5202604 + AluSp SINE Alu 1 303 -10 2158 209 58 55 chr5 194427546 194427572 -5202578 - L1MB2 LINE L1 -1460 4922 4898 1181 144 0 0 chr5 194427584 194427751 -5202399 - AluSg/x SINE Alu -12 300 134 4317 190 42 20 chr5 194427778 194428644 -5201506 - L1MB2 LINE L1 -1472 4910 4019 1710 161 101 13 chr5 194428644 194428960 -5201190 - MER2 DNA MER2_type 0 344 1 4317 190 42 20 chr5 194428960 194429058 -5201092 - L1MB2 LINE L1 -2363 4019 3925 1285 155 0 5 chr5 194429062 194429269 -5200881 - AluSg/x SINE Alu -1 309 104 2141 76 4 0 chr5 194429369 194429633 -5200517 - THE1B LTR MaLR -99 265 1 4870 217 44 48 chr5 194429633 194430119 -5200031 - L1MB2 LINE L1 -2489 3893 3407 1710 188 0 13 chr5 194430119 194430417 -5199733 + AluJo SINE Alu 1 294 -18 4870 217 44 48 chr5 194430417 194431328 -5198822 - L1MB2 LINE L1 -2975 3407 2494 1599 178 26 20 chr5 194431328 194431631 -5198519 - AluJo SINE Alu -7 305 1 4870 217 44 48 chr5 194431631 194432103 -5198047 - L1MB2 LINE L1 -3888 2494 2022 1633 155 37 0 chr5 194432107 194432352 -5197798 - AluSx SINE Alu -19 293 40 400 119 0 0 chr5 194432357 194432416 -5197734 + AluS SINE Alu 1 59 -249 553 308 24 57 chr5 194432419 194432750 -5197400 - L1MB2 LINE L1 -5567 736 417 873 275 122 14 chr5 194432768 194433055 -5197095 - HAL1 LINE L1 -611 1896 1579 2412 100 0 3 chr5 194433215 194433524 -5196626 - AluSp SINE Alu -5 308 1 1903 160 0 17 chr5 194434058 194434358 -5195792 - AluJo SINE Alu -14 298 4 238 298 105 83 chr5 194434798 194434979 -5195171 + MLT1K LTR MaLR 166 350 -238 2494 80 0 10 chr5 194436115 194436429 -5193721 - AluY SINE Alu 0 311 1 2040 143 3 0 chr5 194436531 194436831 -5193319 + AluSx SINE Alu 1 301 -11 333 206 78 0 chr5 194436843 194436945 -5193205 + L1ME4a LINE L1 5831 5940 -181 362 196 168 42 chr5 194437149 194437292 -5192858 + L1ME4a LINE L1 5955 6115 -6 2006 145 0 16 chr5 194437350 194437653 -5192497 - AluSx SINE Alu -14 298 1 1853 154 10 0 chr5 194437665 194437957 -5192193 - AluJb SINE Alu -16 296 2 408 303 103 6 chr5 194437976 194438141 -5192009 - MIR SINE MIR -70 192 12 2189 85 14 14 chr5 194438273 194438568 -5191582 + AluSx SINE Alu 1 295 -17 849 107 33 0 chr5 194439043 194439165 -5190985 - AluSc SINE Alu -15 294 169 359 244 122 38 chr5 194439310 194439390 -5190760 - MIR SINE MIR -82 180 83 2188 89 3 41 chr5 194439390 194439532 -5190618 + AluY SINE Alu 2 148 -163 2619 53 0 0 chr5 194439532 194439834 -5190316 + AluY SINE Alu 2 303 -8 2188 89 3 41 chr5 194439834 194440006 -5190144 + AluY SINE Alu 148 304 -7 359 244 122 38 chr5 194440006 194440056 -5190094 - MIR SINE MIR -179 83 39 211 176 0 0 chr5 194441043 194441077 -5189073 + (CTG)n Simple_repeat Simple_repeat 2 35 0 551 251 104 16 chr5 194441893 194442076 -5188074 - MIR SINE MIR -29 233 35 2152 117 0 3 chr5 194442707 194443058 -5187092 - AluSx SINE Alu 0 352 3 611 198 56 19 chr5 194443305 194443467 -5186683 - L1ME LINE L1 -1746 4334 4167 205 143 13 78 chr5 194443468 194443545 -5186605 + T-rich Low_complexity Low_complexity 1 72 0 33583 52 19 8 chr5 194443550 194448595 -5181555 - L1PA5 LINE L1 -11 6143 1049 21697 52 17 15 chr5 194448596 194451413 -5178737 + L1PA3 LINE L1 1 2824 -3322 27348 29 11 9 chr5 194451513 194455946 -5174204 + L1PA2 LINE L1 1754 6139 -16 18753 38 11 0 chr5 194455946 194458895 -5171255 + L1PA3 LINE L1 3156 6155 0 7271 114 16 0 chr5 194458900 194459929 -5170221 - L1PA5 LINE L1 -5085 1061 17 509 223 149 0 chr5 194459956 194460083 -5170067 - L1ME LINE L1 -1909 4171 4018 1166 183 179 30 chr5 194460083 194460345 -5169805 - AluJo SINE Alu -1 301 1 509 223 149 0 chr5 194460345 194460365 -5169785 - L1ME LINE L1 -2062 4018 4002 301 101 101 6 chr5 194460381 194460539 -5169611 + (TA)n Simple_repeat Simple_repeat 2 174 0 2342 110 53 41 chr5 194460540 194460957 -5169193 - L1MA3 LINE L1 -30 6275 5854 2220 91 21 0 chr5 194461031 194461317 -5168833 - AluSx SINE Alu -20 292 1 4266 146 55 3 chr5 194461317 194461995 -5168155 - L1M1 LINE L1 -6838 727 15 * 4495 253 110 57 chr5 194461992 194462346 -5167804 - L1ME LINE L1 -2057 4023 3689 1572 171 0 43 chr5 194462346 194462651 -5167499 + AluJo SINE Alu 3 294 -18 4495 253 110 57 chr5 194462651 194464357 -5165793 - L1ME LINE L1 -2391 3689 2074 1654 159 23 32 chr5 194464357 194464665 -5165485 + AluJb SINE Alu 7 311 -1 4495 253 110 57 chr5 194464665 194466280 -5163870 - L1ME LINE L1 -4006 2074 124 28 48 0 0 chr5 194466546 194466588 -5163562 + AT_rich Low_complexity Low_complexity 1 42 0 270 0 0 0 chr5 194467106 194467136 -5163014 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 463 203 5 128 chr5 194467196 194467383 -5162767 - L1M4 LINE L1 -1832 4314 4151 867 159 0 0 chr5 194467384 194467516 -5162634 - FLAM_C SINE Alu -11 132 1 366 320 10 0 chr5 194467516 194467616 -5162534 - L1M4 LINE L1 -1982 4164 4064 * 5087 202 148 3 chr5 194467612 194468693 -5161457 + MSTB-int LTR MaLR 414 1651 0 2106 175 107 3 chr5 194468695 194469077 -5161073 + MSTB LTR MaLR 5 426 0 4689 226 30 41 chr5 194469077 194469585 -5160565 - L1M4 LINE L1 -1467 4679 4167 2010 153 0 0 chr5 194469585 194469880 -5160270 - AluSx SINE Alu -17 295 1 4689 226 30 41 chr5 194469880 194470621 -5159529 - L1M4 LINE L1 -1979 4167 3444 2199 117 0 16 chr5 194470629 194470938 -5159212 - AluSx SINE Alu -8 304 1 22 35 0 0 chr5 194470948 194470977 -5159173 + AT_rich Low_complexity Low_complexity 1 29 0 241 271 21 0 chr5 194470986 194471082 -5159068 + L1M4 LINE L1 4561 4658 -1488 2298 122 0 0 chr5 194471092 194471404 -5158746 + AluSx SINE Alu 1 312 0 314 274 261 13 chr5 194471407 194471560 -5158590 - LTR67 LTR ERVL -264 293 103 25 0 0 0 chr5 194471908 194471933 -5158217 + AT_rich Low_complexity Low_complexity 1 25 0 1853 106 39 0 chr5 194471934 194472190 -5157960 - L1PB1 LINE L1 -2 6149 5884 257 375 0 0 chr5 194472231 194472311 -5157839 - L2 LINE L2 -12 3301 3222 59 30 0 30 chr5 194472351 194472450 -5157700 + AT_rich Low_complexity Low_complexity 1 96 0 2221 108 0 0 chr5 194472622 194472909 -5157241 - AluSx SINE Alu -25 287 1 1725 137 65 4 chr5 194472938 194473215 -5156935 - AluSx SINE Alu -18 294 1 509 128 23 39 chr5 194473307 194473431 -5156719 + L1MB7 LINE L1 6021 6183 -1 467 129 0 0 chr5 194473744 194473806 -5156344 + AluJ/FRAM SINE Alu 232 293 -19 615 204 18 0 chr5 194474052 194474165 -5155985 + MIR SINE MIR 116 230 -32 1039 153 26 42 chr5 194474409 194474599 -5155551 + MER20 DNA MER1_type 2 188 -31 1722 163 112 6 chr5 194474720 194475068 -5155082 + MSTA LTR MaLR 14 401 -27 252 136 0 21 chr5 194475089 194475152 -5154998 - L1P LINE L1 -1127 5019 4958 275 163 0 0 chr5 194475152 194475195 -5154955 + MSTA LTR MaLR 386 428 0 1574 160 27 50 chr5 194475343 194475643 -5154507 + AluJo SINE Alu 1 293 -19 636 203 40 113 chr5 194475873 194476229 -5153921 + MER65A-int LTR ERV1 2478 2610 -2513 219 139 0 0 chr5 194476643 194476679 -5153471 + (T)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr5 194476800 194476821 -5153329 + AT_rich Low_complexity Low_complexity 1 21 0 1966 124 4 4 chr5 194476824 194477099 -5153051 - AluSx SINE Alu -37 275 1 1489 153 42 60 chr5 194477111 194477142 -5153008 + MER65A-int LTR ERV1 3477 3507 -1429 1871 111 126 0 chr5 194477142 194477404 -5152746 - AluSx SINE Alu -7 295 1 1489 153 42 60 chr5 194477404 194477725 -5152425 + MER65A-int LTR ERV1 3507 3823 -1113 4992 216 61 19 chr5 194477743 194478877 -5151273 + MER65A-int LTR ERV1 3629 4809 -62 988 114 0 0 chr5 194478887 194479018 -5151132 + AluSx SINE Alu 3 133 -180 24321 85 5 77 chr5 194479038 194479239 -5150911 + L1P LINE L1 1657 1871 -4275 6459 56 3 73 chr5 194479239 194480878 -5149272 + SVA Other Other 24 1385 -1 24321 85 5 77 chr5 194480878 194481076 -5149074 + L1P LINE L1 1871 2082 -4064 2086 118 0 16 chr5 194481076 194481381 -5148769 - AluSc SINE Alu -9 300 1 24321 85 5 77 chr5 194481381 194482596 -5147554 + L1P LINE L1 2082 3382 -2764 2467 84 0 13 chr5 194482596 194482905 -5147245 - AluY SINE Alu -6 305 1 24321 85 5 77 chr5 194482905 194485246 -5144904 + L1P LINE L1 3382 5332 -814 1334 67 6 0 chr5 194485346 194485511 -5144639 + L1PA7 LINE L1 5988 6153 -1 983 133 76 0 chr5 194485513 194485671 -5144479 + AluSx SINE Alu 129 298 -14 378 0 0 0 chr5 194485673 194485715 -5144435 + (CA)n Simple_repeat Simple_repeat 2 43 0 2521 121 106 7 chr5 194485781 194485813 -5144337 + MER65A LTR ERV1 1 28 -417 2357 84 3 7 chr5 194485813 194486110 -5144040 + AluSg SINE Alu 1 296 -14 2521 121 106 7 chr5 194486110 194486482 -5143668 + MER65A LTR ERV1 28 445 0 2126 218 58 11 chr5 194486612 194487058 -5143092 - MLT1C LTR MaLR 0 467 1 2412 103 3 0 chr5 194487102 194487414 -5142736 + AluSq SINE Alu 1 313 0 1119 284 161 29 chr5 194487653 194487857 -5142293 + L2 LINE L2 2454 2630 -683 519 211 60 53 chr5 194487857 194487990 -5142160 - MER94 DNA DNA 0 134 1 1119 284 161 29 chr5 194487990 194488047 -5142103 + L2 LINE L2 2630 2678 -635 2079 97 10 27 chr5 194488047 194488345 -5141805 + AluSc SINE Alu 1 293 -16 1119 284 161 29 chr5 194488345 194488845 -5141305 + L2 LINE L2 2678 3313 0 23 0 0 0 chr5 194488846 194488869 -5141281 + AT_rich Low_complexity Low_complexity 1 23 0 634 209 86 37 chr5 194488925 194489112 -5141038 + L2 LINE L2 3115 3310 -3 226 182 91 0 chr5 194489161 194489216 -5140934 + L1ME LINE L1 5526 5585 -536 3690 146 27 80 chr5 194489216 194490038 -5140112 + Tigger2 DNA MER2_type 1 778 -1940 1294 147 112 4 chr5 194490069 194490301 -5139849 + Tigger2 DNA MER2_type 2451 2707 -11 428 266 8 0 chr5 194490491 194490616 -5139534 + HAL1b LINE L1 1232 1302 -46 28 0 0 0 chr5 194490848 194490876 -5139274 + AT_rich Low_complexity Low_complexity 1 28 0 230 266 161 28 chr5 194491639 194491857 -5138293 + L2 LINE L2 2141 2387 -927 221 150 0 0 chr5 194491932 194491972 -5138178 - L2 LINE L2 -1 3312 3273 332 244 39 0 chr5 194492477 194492555 -5137595 + L2 LINE L2 3216 3296 -17 249 83 0 0 chr5 194493457 194493493 -5136657 + (CGG)n Simple_repeat Simple_repeat 2 37 0 215 73 18 91 chr5 194493507 194493562 -5136588 + (CCCCG)n Simple_repeat Simple_repeat 3 53 0 588 261 38 0 chr5 194493912 194494060 -5136090 - L1ME LINE L1 -489 5681 5526 667 97 177 32 chr5 194494090 194494214 -5135936 + MER30 DNA MER1_type 1 142 -88 867 149 0 145 chr5 194494605 194494667 -5135483 - MER5A DNA MER1_type 0 189 120 2275 82 34 0 chr5 194494667 194494959 -5135191 + AluSx SINE Alu 1 302 -10 867 149 0 145 chr5 194494959 194494987 -5135163 - MER5A DNA MER1_type -69 120 90 2781 101 71 0 chr5 194494987 194495383 -5134767 + MSTA LTR MaLR 1 424 -4 867 149 0 145 chr5 194495383 194495512 -5134638 - MER5A DNA MER1_type -99 90 1 1882 141 3 7 chr5 194495641 194495931 -5134219 + AluJo SINE Alu 16 304 -8 607 308 154 40 chr5 194495954 194496499 -5133651 + L2 LINE L2 1984 2590 -724 387 321 8 46 chr5 194496882 194497013 -5133137 - L2 LINE L2 -1 3271 3146 4224 168 23 7 chr5 194497099 194497851 -5132299 + L1MB4 LINE L1 5415 6178 -2 2100 89 0 49 chr5 194498080 194498384 -5131766 - AluSg SINE Alu -21 289 1 230 337 63 0 chr5 194548571 194548666 -5081484 - MIR SINE MIR -56 206 106 744 331 177 31 chr5 194548675 194549482 -5080668 - L2 LINE L2 -584 2730 1806 190 268 0 0 chr5 194549699 194549740 -5080410 + MIR SINE MIR 106 146 -116 186 43 0 0 chr5 194549992 194550015 -5080135 + (CGG)n Simple_repeat Simple_repeat 2 24 0 270 0 0 0 chr5 194550256 194550286 -5079864 + (CGGGG)n Simple_repeat Simple_repeat 1 30 0 570 209 126 37 chr5 194551720 194551935 -5078215 + Charlie8 DNA MER1_type 53 286 -2131 307 285 74 62 chr5 194552818 194552879 -5077271 + L1M4 LINE L1 3903 3962 -2184 2109 105 3 7 chr5 194552879 194553175 -5076975 + AluSx SINE Alu 2 296 -16 307 285 74 62 chr5 194553175 194553355 -5076795 + L1M4 LINE L1 3962 4147 -1999 198 323 40 16 chr5 194554372 194554496 -5075654 - L2 LINE L2 -1641 1673 1547 1049 274 52 44 chr5 194554500 194554959 -5075191 - LTR16C LTR ERVL -26 465 3 293 333 170 0 chr5 194555100 194555271 -5074879 + MIR SINE MIR 13 212 -50 358 279 71 0 chr5 194555275 194555429 -5074721 + MLT1K LTR MaLR 1 165 -423 270 0 0 0 chr5 194555898 194555928 -5074222 + (CA)n Simple_repeat Simple_repeat 1 30 0 42 0 0 0 chr5 194556337 194556379 -5073771 + AT_rich Low_complexity Low_complexity 1 42 0 547 265 24 42 chr5 194556487 194556703 -5073447 - MIR SINE MIR -32 230 22 195 238 25 88 chr5 194558586 194558666 -5071484 - MIR SINE MIR -110 152 78 1101 137 0 12 chr5 194558693 194558896 -5071254 + AluSg/x SINE Alu 115 315 0 544 227 91 15 chr5 194559342 194559540 -5070610 - L1ME1 LINE L1 -5 6161 5949 2110 253 75 5 chr5 194559581 194560170 -5069980 - MER82 DNA MER2_type -1 652 23 1086 173 105 4 chr5 194560186 194560434 -5069716 - L1ME1 LINE L1 -241 5925 5653 258 285 123 46 chr5 194560461 194560605 -5069545 - MIR SINE MIR -58 204 42 268 287 32 0 chr5 194561543 194561637 -5068513 + Charlie8 DNA MER1_type 166 262 -2155 417 347 6 12 chr5 194562012 194562179 -5067971 + MIR3 SINE MIR 21 186 -22 2132 129 0 0 chr5 194562378 194562673 -5067477 - AluSx SINE Alu -17 295 1 419 235 76 0 chr5 194562687 194562810 -5067340 - MIR SINE MIR -58 150 59 1760 166 23 7 chr5 194562942 194563249 -5066901 - AluJo SINE Alu 0 312 1 1554 150 0 12 chr5 194565556 194565803 -5064347 - AluJo SINE Alu -15 297 54 274 361 71 40 chr5 194567265 194567561 -5062589 + L2 LINE L2 2915 3219 -53 244 327 77 0 chr5 194567573 194567741 -5062409 - L2 LINE L2 -887 2427 2247 411 255 123 10 chr5 194567814 194568018 -5062132 - Charlie8 DNA MER1_type -2015 402 176 566 268 191 21 chr5 194568021 194568357 -5061793 - L2 LINE L2 -1 3312 2920 884 138 7 7 chr5 194568395 194568533 -5061617 - AluJb SINE Alu -16 296 159 402 159 0 0 chr5 194568537 194568600 -5061550 + FLAM SINE Alu 59 121 -22 299 275 79 74 chr5 194568667 194568737 -5061413 - Charlie8 DNA MER1_type -151 190 122 2232 107 3 0 chr5 194568737 194569037 -5061113 - AluSp SINE Alu -11 302 2 299 275 79 74 chr5 194569037 194569100 -5061050 - Charlie8 DNA MER1_type -219 122 53 2029 134 3 3 chr5 194569100 194569399 -5060751 - AluSx SINE Alu -13 299 1 299 275 79 74 chr5 194569399 194569453 -5060697 - Charlie8 DNA MER1_type -288 53 1 1378 185 50 74 chr5 194569527 194569825 -5060325 + AluJo SINE Alu 3 293 -9 356 261 33 83 chr5 194570364 194570544 -5059606 + Charlie8 DNA MER1_type 33 203 -2214 1444 158 21 4 chr5 194570649 194570890 -5059260 - AluJo SINE Alu -10 302 58 437 279 54 50 chr5 194571190 194571412 -5058738 - MIR SINE MIR 0 262 40 321 295 81 90 chr5 194572508 194572628 -5057522 + L2 LINE L2 2949 3069 -244 2249 70 44 0 chr5 194572628 194572926 -5057224 - AluY SINE Alu 0 311 1 321 295 81 90 chr5 194572926 194573127 -5057023 + L2 LINE L2 3069 3267 -46 403 310 49 8 chr5 194573393 194573556 -5056594 + MIR SINE MIR 20 191 -17 298 263 13 0 chr5 194574024 194574100 -5056050 - Charlie8 DNA MER1_type -2338 79 3 439 297 167 23 chr5 194577121 194577475 -5052675 + L2 LINE L2 2887 3291 -22 221 138 0 108 chr5 194579228 194579293 -5050857 + (TGAA)n Simple_repeat Simple_repeat 1 58 0 270 247 63 86 chr5 194579496 194579620 -5050530 + MER5A DNA MER1_type 15 144 -45 2281 71 0 0 chr5 194579620 194579915 -5050235 + AluSc SINE Alu 1 295 -14 270 247 63 86 chr5 194579915 194579949 -5050201 + MER5A DNA MER1_type 144 177 -12 228 135 0 0 chr5 194580369 194580406 -5049744 + (A)n Simple_repeat Simple_repeat 1 37 0 1496 128 27 16 chr5 194580761 194581019 -5049131 - AluSp SINE Alu -52 261 1 539 206 103 91 chr5 194581021 194581088 -5049062 + L1ME3A LINE L1 5911 5976 -194 1938 130 7 14 chr5 194581088 194581380 -5048770 + AluSx SINE Alu 1 290 -22 539 206 103 91 chr5 194581380 194581413 -5048737 + L1ME3A LINE L1 5976 6007 -163 440 214 234 28 chr5 194581413 194581558 -5048592 + MER96 DNA MER1_type 1 175 0 539 206 103 91 chr5 194581558 194581708 -5048442 + L1ME3A LINE L1 6007 6165 -5 749 150 0 0 chr5 194581728 194581841 -5048309 + FLAM_A SINE Alu 20 132 -10 222 385 36 0 chr5 194581842 194581925 -5048225 + MIR SINE MIR 61 146 -62 541 237 89 30 chr5 194582304 194582473 -5047677 + MIR SINE MIR 84 262 0 2470 73 0 3 chr5 194582504 194582817 -5047333 + AluSq SINE Alu 1 312 -1 934 180 17 6 chr5 194583233 194583411 -5046739 + MER5A DNA MER1_type 4 183 -6 374 339 17 0 chr5 194583434 194583552 -5046598 - MIR SINE MIR -95 167 48 809 243 169 21 chr5 194583724 194584061 -5046089 + L2 LINE L2 2922 3308 -5 252 0 0 0 chr5 194584319 194584347 -5045803 + (TG)n Simple_repeat Simple_repeat 2 29 0 332 321 190 7 chr5 194585048 194585185 -5044965 - MIR SINE MIR -88 174 13 207 156 0 0 chr5 194585215 194585247 -5044903 + G-rich Low_complexity Low_complexity 5 36 0 224 239 108 46 chr5 194585740 194585870 -5044280 - L2 LINE L2 -1 3271 3134 336 233 237 30 chr5 194586330 194586600 -5043550 + L2 LINE L2 2553 2878 -436 201 379 10 10 chr5 194586833 194586936 -5043214 + MIR SINE MIR 158 260 -2 225 277 12 12 chr5 194587872 194587955 -5042195 + C-rich Low_complexity Low_complexity 3 85 0 234 257 57 0 chr5 194587981 194588086 -5042064 + (CTGGGG)n Simple_repeat Simple_repeat 2 112 0 414 269 28 50 chr5 194588409 194588550 -5041600 + MIR SINE MIR 13 150 -112 370 251 118 118 chr5 194588549 194588991 -5041159 - L2 LINE L2 -5 3308 2867 * 303 304 39 34 chr5 194589111 194589315 -5040835 - L2 LINE L2 -186 3086 2882 957 345 19 15 chr5 194589376 194589787 -5040363 + L1MC4a LINE L1 5514 5926 -1882 229 273 28 21 chr5 194589794 194589937 -5040213 + (TA)n Simple_repeat Simple_repeat 1 144 0 2277 98 3 0 chr5 194589938 194590243 -5039907 - AluSx SINE Alu -6 306 1 411 255 103 78 chr5 194590428 194590632 -5039518 + LTR67 LTR ERVL 16 224 -333 240 188 0 21 chr5 194590965 194591013 -5039137 - MIR SINE MIR -110 152 106 306 368 32 0 chr5 194592280 194592435 -5037715 + MIR3 SINE MIR 43 202 -6 255 308 150 27 chr5 194594176 194594295 -5035855 - L1MC4a LINE L1 -1573 6235 6132 2092 117 0 7 chr5 194594295 194594595 -5035555 + AluSx SINE Alu 1 298 -14 255 308 150 27 chr5 194594595 194594809 -5035341 - L1MC4a LINE L1 -1676 6132 5861 439 243 32 142 chr5 194594838 194595056 -5035094 + L1MC4a LINE L1 5676 5869 -1939 26 101 0 0 chr5 194595155 194595244 -5034906 + AT_rich Low_complexity Low_complexity 1 89 0 281 298 29 0 chr5 194595333 194595437 -5034713 - LTR67 LTR ERVL -27 530 424 359 111 0 2 chr5 194596010 194596069 -5034081 - Alu SINE Alu -249 52 1 1781 134 57 13 chr5 194597858 194598157 -5031993 - AluJo SINE Alu 0 312 1 181 91 68 0 chr5 194599205 194599249 -5030901 + (CAAAC)n Simple_repeat Simple_repeat 3 49 0 2389 231 91 16 chr5 194599251 194599664 -5030486 - L1MB8 LINE L1 -6 6172 5689 1325 182 70 79 chr5 194599664 194599820 -5030330 + MER47A DNA MER2_type 1 157 -2166 1948 134 43 0 chr5 194599820 194600119 -5030031 + AluSx SINE Alu 1 312 0 1325 182 70 79 chr5 194600119 194600331 -5029819 + MER47A DNA MER2_type 157 366 0 2389 231 91 16 chr5 194600331 194600585 -5029565 - L1MB8 LINE L1 -489 5689 5455 2119 134 0 3 chr5 194600622 194600935 -5029215 + AluJo SINE Alu 1 312 0 233 299 35 0 chr5 194601129 194601216 -5028934 + MLT1K LTR MaLR 496 585 -3 270 300 115 8 chr5 194603459 194603589 -5026561 - MLT1K LTR MaLR -25 563 420 304 139 56 28 chr5 194603587 194603659 -5026491 + L1MB2 LINE L1 6097 6170 -1 1915 160 3 6 chr5 194603664 194603977 -5026173 + AluJb SINE Alu 1 312 0 268 282 86 52 chr5 194604057 194604231 -5025919 + L2 LINE L2 3002 3181 -132 1370 96 9 9 chr5 194604256 194604474 -5025676 - pTR5 LTR ERV1 -2044 394 177 347 235 7 9 chr5 194604478 194604581 -5025569 - LTR30 LTR ERV1 -98 624 375 985 105 0 31 chr5 194604581 194604743 -5025407 - pTR5 LTR ERV1 -413 2025 1869 290 155 0 0 chr5 194604741 194604799 -5025351 - pTR5 LTR ERV1 -1626 812 755 * 450 264 47 8 chr5 194604799 194604928 -5025222 + L2 LINE L2 3180 3313 0 259 267 56 11 chr5 194604938 194605028 -5025122 - MLT1K LTR MaLR -162 426 333 415 320 51 21 chr5 194605133 194605367 -5024783 - MLT1K LTR MaLR -328 260 20 1139 202 40 43 chr5 194605429 194605502 -5024648 + MLT1A1 LTR MaLR 21 93 -272 2154 96 3 3 chr5 194605502 194605793 -5024357 + AluSx SINE Alu 2 292 -20 1139 202 40 43 chr5 194605793 194606065 -5024085 + MLT1A1 LTR MaLR 93 365 0 641 299 76 4 chr5 194606259 194606523 -5023627 + L1ME4a LINE L1 5619 5901 -220 22 0 0 0 chr5 194607170 194607192 -5022958 + AT_rich Low_complexity Low_complexity 1 22 0 921 264 42 84 chr5 194607345 194607724 -5022426 + MLT1A1 LTR MaLR 1 363 -2 267 283 40 75 chr5 194608099 194608325 -5021825 - LTR67 LTR ERVL -296 261 44 2202 265 197 40 chr5 194608413 194608482 -5021668 + HAL1 LINE L1 15 72 -2435 1624 162 16 36 chr5 194608482 194608791 -5021359 - AluJo SINE Alu -7 305 3 2202 265 197 40 chr5 194608791 194609528 -5020622 + HAL1 LINE L1 72 692 -1815 1999 139 3 0 chr5 194609528 194609859 -5020291 + AluSx SINE Alu 1 312 0 2202 265 197 40 chr5 194609859 194610642 -5019508 + HAL1 LINE L1 692 1854 -653 2115 118 3 0 chr5 194610829 194611126 -5019024 + AluSx SINE Alu 1 298 -14 444 303 56 10 chr5 194611316 194611511 -5018639 + LTR67 LTR ERVL 275 478 -79 282 29 0 0 chr5 194611511 194611546 -5018604 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 905 179 0 26 chr5 194611549 194611705 -5018445 - AluJo SINE Alu -30 282 131 860 150 0 0 chr5 194611784 194611911 -5018239 - AluJo SINE Alu -185 127 1 411 155 36 12 chr5 194611913 194611997 -5018153 + LTR67 LTR ERVL 464 549 -8 582 324 135 35 chr5 194612102 194612583 -5017567 - L2 LINE L2 -553 2761 2233 963 189 118 50 chr5 194612659 194612961 -5017189 + MER63 DNA MER1_type 673 1002 -60 2396 88 0 0 chr5 194612961 194613269 -5016881 - AluSg SINE Alu -2 308 1 963 189 118 50 chr5 194613269 194613305 -5016845 + MER63 DNA MER1_type 1002 1034 -28 505 304 20 10 chr5 194613329 194613533 -5016617 - L2 LINE L2 -1077 2237 2032 303 306 89 8 chr5 194613672 194613796 -5016354 - L2 LINE L2 -213 3059 2926 717 252 39 26 chr5 194613859 194614089 -5016061 - MLT1J LTR MaLR -50 461 229 2263 115 0 0 chr5 194614106 194614418 -5015732 - AluSx SINE Alu 0 312 1 458 291 121 0 chr5 194614993 194615134 -5015016 - MIR SINE MIR -11 251 94 417 307 7 52 chr5 194615143 194615296 -5014854 - L2 LINE L2 -9 3304 3159 244 298 12 12 chr5 194615302 194615386 -5014764 + L2 LINE L2 1869 1952 -1362 1375 285 223 27 chr5 194615387 194615458 -5014692 - L2 LINE L2 -25 3288 3232 2130 119 0 0 chr5 194615458 194615751 -5014399 + AluSx SINE Alu 1 293 -19 1375 285 223 27 chr5 194615751 194616648 -5013502 - L2 LINE L2 -81 3232 2110 380 274 20 10 chr5 194616644 194616746 -5013404 + L2 LINE L2 3210 3312 -1 * 659 262 189 33 chr5 194616751 194617065 -5013085 - L2 LINE L2 -169 3144 2880 1873 110 0 84 chr5 194617065 194617401 -5012749 - AluSq SINE Alu 0 310 1 659 262 189 33 chr5 194617401 194617627 -5012523 - L2 LINE L2 -433 2880 2508 1481 181 23 36 chr5 194617936 194618240 -5011910 + AluJo SINE Alu 1 300 -12 1551 204 128 13 chr5 194618308 194618770 -5011380 + MLT1G1 LTR MaLR 81 595 0 344 329 194 19 chr5 194618777 194619253 -5010897 + L2 LINE L2 2482 3033 -239 599 206 85 85 chr5 194619269 194619337 -5010813 + MER5A DNA MER1_type 1 68 -121 1439 189 62 3 chr5 194619337 194619453 -5010697 + AluJb SINE Alu 1 109 -203 222 37 0 0 chr5 194619453 194619480 -5010670 + (CAAAA)n Simple_repeat Simple_repeat 5 31 0 1439 189 62 3 chr5 194619480 194619654 -5010496 + AluJb SINE Alu 109 308 -4 599 206 85 85 chr5 194619654 194619774 -5010376 + MER5A DNA MER1_type 67 189 0 268 323 52 0 chr5 194619896 194619992 -5010158 + L2 LINE L2 3168 3268 -4 591 293 126 0 chr5 194620225 194620440 -5009710 - MIR SINE MIR -6 256 15 266 300 33 0 chr5 194620556 194620646 -5009504 - Charlie8 DNA MER1_type -2253 164 72 672 123 74 49 chr5 194620658 194620780 -5009370 + FLAM_C SINE Alu 3 127 -16 241 219 110 0 chr5 194621023 194621096 -5009054 + L2 LINE L2 3181 3261 -11 213 39 0 0 chr5 194621410 194621436 -5008714 + (GGA)n Simple_repeat Simple_repeat 1 26 0 284 333 85 23 chr5 194621551 194621728 -5008422 + MIR3 SINE MIR 1 188 -20 326 264 96 8 chr5 194622206 194622331 -5007819 + MIR3 SINE MIR 11 146 -62 23 33 0 0 chr5 194625614 194625644 -5004506 + GC_rich Low_complexity Low_complexity 1 30 0 370 279 100 6 chr5 194627049 194627206 -5002944 + MIR SINE MIR 22 194 -64 478 158 10 69 chr5 194627232 194627333 -5002817 - MIR SINE MIR -110 152 58 2439 83 3 0 chr5 194627811 194628123 -5002027 - AluSp SINE Alu 0 313 1 493 311 170 22 chr5 194628204 194628516 -5001634 + L2 LINE L2 2896 3253 -60 589 307 113 42 chr5 194630420 194630967 -4999183 - MLT1K LTR MaLR 0 588 3 234 312 0 7 chr5 194631910 194632048 -4998102 + (CA)n Simple_repeat Simple_repeat 1 137 0 764 212 22 0 chr5 194633013 194633515 -4996635 + (TCCA)n Simple_repeat Simple_repeat 1 513 0 228 293 114 16 chr5 194634585 194634708 -4995442 - L2 LINE L2 0 3272 3138 270 80 80 20 chr5 194634722 194634772 -4995378 - MADE1 DNA Mariner -35 45 2 513 302 50 0 chr5 194634865 194635047 -4995103 - MER58 DNA MER1_type -146 195 5 2036 106 3 50 chr5 194635288 194635608 -4994542 + AluSx SINE Alu 1 305 -7 299 330 68 0 chr5 194636362 194636480 -4993670 - L2 LINE L2 -10 3262 3137 2207 61 22 4 chr5 194636515 194636815 -4993335 + AluY SINE Alu 2 306 0 194 367 41 59 chr5 194636981 194637150 -4993000 - L3 LINE CR1 -902 675 510 291 364 85 0 chr5 194637168 194637297 -4992853 - MIR SINE MIR 0 262 123 531 303 49 22 chr5 194637370 194637690 -4992460 - L1ME LINE L1 -416 5705 5380 597 299 237 10 chr5 194638665 194639053 -4991097 - L2 LINE L2 -1 3312 2837 2014 132 0 7 chr5 194639451 194639754 -4990396 - AluJo SINE Alu -11 301 1 1395 257 179 21 chr5 194640019 194640841 -4989309 - L2 LINE L2 -2 3311 2350 278 283 57 9 chr5 194640876 194640982 -4989168 + L2 LINE L2 2278 2388 -926 180 333 20 49 chr5 194641111 194641213 -4988937 + L2 LINE L2 3173 3271 -1 236 345 48 14 chr5 194641221 194641366 -4988784 + L2 LINE L2 2608 2757 -557 698 247 72 99 chr5 194641379 194641579 -4988571 + MER102a DNA MER1_type 8 197 -1220 2190 99 3 13 chr5 194641579 194641893 -4988257 - AluSx SINE Alu -1 311 1 698 247 72 99 chr5 194641893 194642024 -4988126 + MER102a DNA MER1_type 197 330 0 2011 60 89 21 chr5 194642127 194642409 -4987741 + AluSp SINE Alu 5 305 -8 215 294 157 0 chr5 194642419 194642521 -4987629 - L2 LINE L2 -495 2819 2702 21 0 0 0 chr5 194645035 194645056 -4985094 + GC_rich Low_complexity Low_complexity 1 21 0 35 24 0 0 chr5 194645541 194645583 -4984567 + GC_rich Low_complexity Low_complexity 1 42 0 328 304 62 0 chr5 194647333 194647445 -4982705 - MIR SINE MIR -37 225 107 395 319 25 31 chr5 194647920 194648083 -4982067 + MIR3 SINE MIR 22 183 -25 354 207 5 173 chr5 194649037 194649245 -4980905 + MER5B DNA MER1_type 1 173 -5 521 292 118 0 chr5 194649408 194649586 -4980564 - MIR SINE MIR -15 247 49 874 168 6 6 chr5 194649853 194650552 -4979598 + (CCA)n Simple_repeat Simple_repeat 1 699 0 829 94 0 53 chr5 194650553 194650776 -4979374 + (CACCAT)n Simple_repeat Simple_repeat 1 211 0 648 190 11 17 chr5 194650796 194650970 -4979180 + (CACCAT)n Simple_repeat Simple_repeat 1 173 0 374 338 97 0 chr5 194651378 194651523 -4978627 - MIR SINE MIR -80 182 24 375 320 100 4 chr5 194651530 194651755 -4978395 - MIR3 SINE MIR 0 262 15 285 188 0 0 chr5 194652635 194652683 -4977467 - MER91A DNA MER1_type -148 48 1 268 203 94 0 chr5 194653830 194653894 -4976256 - MIR SINE MIR -84 178 109 2141 95 3 3 chr5 194654205 194654514 -4975636 - AluSp SINE Alu 0 309 1 271 245 52 0 chr5 194655097 194655183 -4974967 - MIR SINE MIR -75 133 37 2273 123 0 0 chr5 194655183 194655492 -4974658 + AluSx SINE Alu 1 309 -3 271 245 52 0 chr5 194655492 194655503 -4974647 - MIR SINE MIR -171 37 28 276 161 0 123 chr5 194655777 194655907 -4974243 + (CCCCAG)n Simple_repeat Simple_repeat 5 118 0 218 206 79 0 chr5 194656019 194656082 -4974068 - MIR SINE MIR -147 115 48 465 309 72 0 chr5 194656111 194656292 -4973858 + MIR SINE MIR 67 260 -2 518 315 79 18 chr5 194656383 194656621 -4973529 - MIR SINE MIR -3 259 8 259 138 86 0 chr5 194657611 194657669 -4972481 - MIR SINE MIR -118 144 82 396 174 193 53 chr5 194658371 194658502 -4971648 + MIR SINE MIR 36 183 -58 575 240 64 0 chr5 194658672 194658797 -4971353 + MER91B DNA MER1_type 1 133 -57 262 282 192 0 chr5 194658808 194658886 -4971264 + MIR SINE MIR 31 123 -139 1796 144 7 0 chr5 194658886 194659163 -4970987 - AluJo SINE Alu -19 293 15 937 222 4 62 chr5 194659212 194659437 -4970713 + AluJo SINE Alu 3 214 -98 298 212 59 0 chr5 194659437 194659522 -4970628 + AluJb SINE Alu 79 168 -134 657 248 177 5 chr5 194659774 194659972 -4970178 - MIR SINE MIR 0 262 31 221 362 110 31 chr5 194660504 194660631 -4969519 - L2 LINE L2 0 3313 3177 2113 92 6 29 chr5 194660734 194661048 -4969102 - AluSq SINE Alu -6 307 1 183 42 0 0 chr5 194661052 194661076 -4969074 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2237 131 0 0 chr5 194661078 194661390 -4968760 - AluSx SINE Alu 0 312 1 483 144 0 0 chr5 194661432 194661529 -4968621 + (TG)n Simple_repeat Simple_repeat 2 98 0 241 286 148 26 chr5 194661660 194661849 -4968301 + L2 LINE L2 3044 3255 -17 192 274 82 0 chr5 194662079 194662152 -4967998 - L2 LINE L2 -52 3261 3183 354 319 48 6 chr5 194662169 194662327 -4967823 + MIR SINE MIR 20 181 -63 320 291 126 13 chr5 194662784 194662935 -4967215 - MIR SINE MIR -15 247 80 543 231 39 19 chr5 194663283 194663439 -4966711 + MER53 DNA DNA 6 164 -25 207 146 0 0 chr5 194663749 194663790 -4966360 + (CA)n Simple_repeat Simple_repeat 1 41 0 2213 114 0 0 chr5 194664758 194665057 -4965093 + AluSx SINE Alu 1 299 -13 386 326 39 0 chr5 194666629 194666758 -4963392 + MIR SINE MIR 59 192 -70 640 222 13 13 chr5 194666761 194666914 -4963236 - MER2 DNA MER2_type 0 345 193 2116 106 3 23 chr5 194667878 194668180 -4961970 - AluSq SINE Alu -17 296 1 909 268 182 22 chr5 194668197 194668732 -4961418 + L2 LINE L2 2679 3274 -39 857 231 147 63 chr5 194668850 194669098 -4961052 + MLT1K LTR MaLR 50 345 -243 2181 81 0 20 chr5 194669098 194669435 -4960715 - AluSp SINE Alu 0 313 2 857 231 147 63 chr5 194669435 194669580 -4960570 + MLT1K LTR MaLR 345 476 -112 328 220 44 22 chr5 194669631 194669702 -4960448 + MLT1K LTR MaLR 439 514 -74 2402 48 0 3 chr5 194669702 194669994 -4960156 + AluY SINE Alu 1 291 -20 328 220 44 22 chr5 194669994 194670013 -4960137 + MLT1K LTR MaLR 514 531 -57 322 289 200 0 chr5 194670222 194670357 -4959793 + MIR SINE MIR 44 205 -57 325 282 0 0 chr5 194670452 194670537 -4959613 - MIR SINE MIR -108 154 70 426 342 89 13 chr5 194670898 194671135 -4959015 - MIR SINE MIR 0 262 8 229 344 11 0 chr5 194671204 194671297 -4958853 + L1ME LINE L1 1 94 -6446 220 171 0 0 chr5 194671612 194671647 -4958503 + (CAG)n Simple_repeat Simple_repeat 3 37 0 21 36 0 0 chr5 194672079 194672107 -4958043 + AT_rich Low_complexity Low_complexity 1 28 0 3275 221 76 30 chr5 194672108 194672257 -4957893 + L1ME LINE L1 917 1058 -5482 2033 116 3 57 chr5 194672257 194672575 -4957575 + AluSx SINE Alu 1 301 -11 3275 221 76 30 chr5 194672575 194673825 -4956325 + L1ME LINE L1 1058 2413 -4127 898 244 87 17 chr5 194673825 194673882 -4956268 + L1ME LINE L1 5324 5376 -1164 1722 141 16 52 chr5 194673882 194674042 -4956108 - AluJb SINE Alu -17 295 150 2384 78 0 13 chr5 194674042 194674348 -4955802 - AluY SINE Alu -9 302 1 1722 141 16 52 chr5 194674348 194674493 -4955657 - AluJb SINE Alu -162 150 1 898 244 87 17 chr5 194674493 194674779 -4955371 + L1ME LINE L1 5376 5691 -849 4759 168 215 6 chr5 194674779 194676179 -4953971 - MER52A LTR ERV1 0 1755 1 1309 208 124 0 chr5 194676181 194676527 -4953623 + L1ME LINE L1 5687 6075 -485 1807 159 0 7 chr5 194676535 194676851 -4953299 + AluJo SINE Alu 1 314 0 281 239 0 15 chr5 194677001 194677068 -4953082 + L2 LINE L2 3009 3074 -239 1302 232 61 24 chr5 194677072 194677451 -4952699 - MLT1D LTR MaLR 0 505 113 1075 264 53 94 chr5 194677475 194678211 -4951939 - MER21B LTR ERV1 -157 706 1 436 230 0 56 chr5 194678211 194678324 -4951826 - MLT1D LTR MaLR -520 106 1 208 296 81 54 chr5 194678515 194678738 -4951412 - L2 LINE L2 -221 3051 2823 292 268 91 49 chr5 194679004 194679286 -4950864 + MLT1L LTR MaLR 110 484 -131 182 239 0 0 chr5 194679364 194679410 -4950740 + MIR SINE MIR 109 154 -108 * 363 281 116 54 chr5 194679409 194679498 -4950652 - L2 LINE L2 -8 3305 3223 1846 147 27 3 chr5 194679498 194679676 -4950474 - AluSx SINE Alu -6 306 117 207 0 0 0 chr5 194679676 194679699 -4950451 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 1846 147 27 3 chr5 194679699 194679819 -4950331 - AluSx SINE Alu -195 117 1 363 281 116 54 chr5 194679819 194680213 -4949937 - L2 LINE L2 -90 3223 2712 180 356 0 0 chr5 194680706 194680765 -4949385 - L3b LINE CR1 -359 1224 1166 186 371 57 40 chr5 194681037 194681212 -4948938 - L3 LINE CR1 -765 812 635 * 292 277 192 24 chr5 194681194 194681486 -4948664 - L2 LINE L2 0 3272 2932 533 307 31 9 chr5 194681704 194681932 -4948218 - MLT1K LTR MaLR -342 246 14 562 260 200 48 chr5 194682464 194682899 -4947251 - MLT1J LTR MaLR -10 501 1 246 229 33 0 chr5 194682938 194682999 -4947151 - MIR SINE MIR -91 171 109 1719 152 7 50 chr5 194683114 194683416 -4946734 - AluJo SINE Alu -19 293 5 590 304 134 16 chr5 194684235 194684870 -4945280 + L2 LINE L2 2581 3290 -23 1046 254 106 20 chr5 194684888 194685294 -4944856 - LTR16C LTR ERVL -1 490 50 342 231 13 0 chr5 194686206 194686284 -4943866 + MER63 DNA MER1_type 672 750 -312 1919 106 0 63 chr5 194687120 194687462 -4942688 - AluSx SINE Alu 0 323 1 492 278 57 28 chr5 194688914 194689126 -4941024 - MLT1K LTR MaLR -2 586 369 275 276 90 13 chr5 194689543 194689688 -4940462 + MLT1I LTR MaLR 63 184 -225 2229 117 0 0 chr5 194689718 194690026 -4940124 - AluSx SINE Alu -4 308 1 2631 94 9 0 chr5 194691366 194691716 -4938434 + THE1A LTR MaLR 3 355 0 643 318 45 8 chr5 194691794 194692036 -4938114 + MIR SINE MIR 6 256 -6 562 326 158 10 chr5 194692656 194693061 -4937089 - L2 LINE L2 -1 3312 2848 696 235 81 8 chr5 194693975 194694209 -4935941 - MLT1K LTR MaLR -6 582 332 1927 97 7 3 chr5 194694355 194694643 -4935507 - THE1C LTR MaLR 0 375 87 1026 285 95 15 chr5 194694927 194695464 -4934686 - MLT1K LTR MaLR 0 588 9 1726 177 3 0 chr5 194695733 194696038 -4934112 + AluJb SINE Alu 1 306 -6 349 292 23 31 chr5 194696044 194696174 -4933976 - MIR SINE MIR -125 137 9 601 266 204 15 chr5 194696389 194696723 -4933427 + L2 LINE L2 2914 3310 -3 532 199 8 8 chr5 194696787 194696918 -4933232 + CT-rich Low_complexity Low_complexity 2 132 0 963 136 0 0 chr5 194696918 194697050 -4933100 - FLAM_C SINE Alu -1 132 1 180 320 78 29 chr5 194697431 194697534 -4932616 - L3b LINE CR1 -267 1316 1209 404 290 121 73 chr5 194697930 194698102 -4932048 + L2 LINE L2 2854 3016 -297 463 282 34 13 chr5 194698102 194698251 -4931899 - MER5A DNA MER1_type -13 176 25 404 290 121 73 chr5 194698251 194698368 -4931782 + L2 LINE L2 3016 3312 -1 671 142 0 19 chr5 194698934 194698949 -4931201 - FLAM_C SINE Alu -174 138 124 189 0 0 0 chr5 194698949 194698970 -4931180 + (TA)n Simple_repeat Simple_repeat 1 21 0 671 142 0 19 chr5 194698970 194699060 -4931090 - FLAM_C SINE Alu -188 124 35 305 301 136 53 chr5 194699923 194700636 -4929514 - L2 LINE L2 -5 3308 2413 181 289 0 92 chr5 194700667 194700743 -4929407 - MER5A DNA MER1_type -94 95 27 913 226 67 58 chr5 194701177 194701505 -4928645 - MLT1J LTR MaLR -76 435 105 277 305 67 34 chr5 194701724 194701963 -4928187 + L2 LINE L2 2857 3103 -210 2171 128 0 3 chr5 194702363 194702676 -4927474 + AluSx SINE Alu 1 312 0 347 206 0 0 chr5 194702677 194702745 -4927405 + MER103 DNA DNA 21 88 -78 390 274 38 0 chr5 194702972 194703078 -4927072 + MER91C DNA MER1_type 27 136 -4 679 274 42 73 chr5 194703189 194703547 -4926603 + MLT1I LTR MaLR 63 409 0 463 202 121 0 chr5 194703999 194704141 -4926009 + MIR SINE MIR 36 183 -55 265 192 0 0 chr5 194704280 194704332 -4925818 - MLT1D LTR MaLR 0 505 454 568 155 49 56 chr5 194704345 194704487 -4925663 - L1MB2 LINE L1 -2 6169 6029 1333 192 106 25 chr5 194704492 194704851 -4925299 - MLT1D LTR MaLR -41 464 77 221 262 16 16 chr5 194705170 194705231 -4924919 - L2 LINE L2 -71 3242 3182 347 332 132 4 chr5 194705330 194705580 -4924570 - L2 LINE L2 -4 3309 3028 365 266 179 48 chr5 194706761 194706968 -4923182 + MLT1K LTR MaLR 40 273 -315 306 0 0 0 chr5 194706971 194707005 -4923145 + (TCCCC)n Simple_repeat Simple_repeat 3 36 0 1047 152 0 49 chr5 194707026 194707044 -4923106 - AluJo SINE Alu -1 311 294 2132 131 10 0 chr5 194707044 194707349 -4922801 - AluSg SINE Alu -2 308 1 1047 152 0 49 chr5 194707349 194707514 -4922636 - AluJo SINE Alu -18 294 137 764 223 113 28 chr5 194707515 194707797 -4922353 + MLT1K LTR MaLR 264 569 -19 219 224 17 52 chr5 194707808 194707866 -4922284 + L2 LINE L2 3239 3294 -19 205 200 0 0 chr5 194707835 194707870 -4922280 + MIR SINE MIR 219 253 -9 * 647 268 156 0 chr5 194707890 194708121 -4922029 + L1MD2 LINE L1 5876 6142 -217 725 208 13 0 chr5 194708123 194708272 -4921878 + L1MD2 LINE L1 6196 6346 -13 356 350 1 24 chr5 194708329 194708496 -4921654 + MIR SINE MIR 21 146 -62 595 274 18 12 chr5 194708614 194708778 -4921372 + MIR SINE MIR 20 184 -78 678 133 0 33 chr5 194708778 194708898 -4921252 - AluJo SINE Alu -185 127 12 238 302 0 0 chr5 194708912 194708975 -4921175 + MIR SINE MIR 175 237 -25 582 284 12 6 chr5 194710241 194710410 -4919740 - MLT1K LTR MaLR -317 271 102 228 311 0 0 chr5 194710770 194710831 -4919319 - MIR SINE MIR -103 105 45 412 211 163 24 chr5 194711293 194711416 -4918734 - MIR SINE MIR -72 190 51 308 359 19 0 chr5 194711809 194711912 -4918238 + MIR SINE MIR 33 137 -71 227 291 28 82 chr5 194714325 194714507 -4915643 + MER5A DNA MER1_type 17 188 -1 480 214 86 0 chr5 194714570 194714687 -4915463 + MIR SINE MIR 39 165 -97 228 311 159 8 chr5 194714908 194715040 -4915110 - L2 LINE L2 -49 3264 3113 485 232 34 45 chr5 194715078 194715255 -4914895 - L2 LINE L2 -340 2974 2800 25 83 0 0 chr5 194716058 194716118 -4914032 + GC_rich Low_complexity Low_complexity 1 60 0 185 254 51 0 chr5 194716808 194716867 -4913283 - MIR SINE MIR -33 229 168 182 330 75 38 chr5 194717333 194717439 -4912711 - L2 LINE L2 -16 3256 3147 435 277 131 44 chr5 194717581 194717787 -4912363 + MIR SINE MIR 5 228 -34 432 0 0 0 chr5 194718246 194718294 -4911856 + (TG)n Simple_repeat Simple_repeat 2 49 0 1935 85 0 151 chr5 194719259 194719623 -4910527 - AluSg1 SINE Alu 0 309 1 634 272 59 0 chr5 194719748 194719950 -4910200 - MLT1K LTR MaLR -4 584 371 196 361 120 19 chr5 194722110 194722326 -4907824 + L2 LINE L2 3035 3272 0 317 221 16 71 chr5 194723077 194723204 -4906946 - MER113 DNA MER1_type? -396 125 6 405 243 57 64 chr5 194723436 194723576 -4906574 - MIR3 SINE MIR -16 192 54 333 282 122 0 chr5 194723609 194723761 -4906389 + L1ME1 LINE L1 5260 5440 -730 319 311 8 16 chr5 194723762 194723884 -4906266 + L1MC4a LINE L1 53 173 -5946 2646 184 21 8 chr5 194724057 194724568 -4905582 + L1MB3 LINE L1 5659 6176 -7 238 226 75 0 chr5 194724727 194724780 -4905370 + L1MC4a LINE L1 573 629 -5490 309 224 147 28 chr5 194724927 194725070 -4905080 + L1MC4a LINE L1 764 923 -5196 2012 171 86 113 chr5 194725077 194725865 -4904285 + L1ME1 LINE L1 4420 5186 -960 1834 219 59 63 chr5 194725868 194726174 -4903976 + L1ME1 LINE L1 5575 5880 -286 1547 180 62 4 chr5 194726174 194726446 -4903704 - AluJo SINE Alu -24 288 1 1834 219 59 63 chr5 194726446 194726728 -4903422 + L1ME1 LINE L1 5880 6161 -5 1107 228 49 46 chr5 194726746 194727588 -4902562 + L1ME1 LINE L1 5175 6162 -4 767 274 85 55 chr5 194727708 194727755 -4902395 + L1MC4a LINE L1 1047 1091 -5219 1772 173 3 40 chr5 194727755 194728078 -4902072 + AluJo SINE Alu 1 311 -1 767 274 85 55 chr5 194728078 194728259 -4901891 + L1MC4a LINE L1 1091 1265 -5045 2102 115 0 56 chr5 194728259 194728582 -4901568 + AluSx SINE Alu 3 307 -5 767 274 85 55 chr5 194728582 194729012 -4901138 + L1MC4a LINE L1 1265 1726 -4584 3651 248 92 69 chr5 194729032 194730158 -4899992 + L1MC4a LINE L1 1789 2888 -3241 3318 100 2 0 chr5 194730158 194730618 -4899532 + L1PA14 LINE L1 5700 6161 0 3651 248 92 69 chr5 194730618 194730916 -4899234 + L1MC4a LINE L1 2888 3178 -2951 1533 181 63 36 chr5 194730916 194731219 -4898931 - AluJo SINE Alu 0 312 2 3651 248 92 69 chr5 194731219 194732199 -4897951 + L1MC4a LINE L1 3178 4224 -1905 1574 232 89 71 chr5 194732217 194732692 -4897458 + L1MC4a LINE L1 4425 4919 -1210 2491 66 3 10 chr5 194732692 194732993 -4897157 - AluY SINE Alu -12 299 1 1574 232 89 71 chr5 194732993 194733249 -4896901 + L1MC4a LINE L1 4919 5169 -960 1073 137 7 0 chr5 194733257 194733410 -4896740 + AluSx SINE Alu 1 154 -158 452 232 121 23 chr5 194733447 194733525 -4896625 + L1MC4a LINE L1 5158 5227 -926 1975 130 0 11 chr5 194733525 194733809 -4896341 - AluSx SINE Alu -31 281 1 452 232 121 23 chr5 194733809 194734024 -4896126 + L1MC4a LINE L1 5227 5471 -682 2780 225 62 8 chr5 194734030 194734773 -4895377 + L1ME3A LINE L1 5380 6162 -8 360 261 172 0 chr5 194734808 194734942 -4895208 + L1MC4a LINE L1 5441 5597 -2194 725 203 121 10 chr5 194734959 194735166 -4894984 - L1MC1 LINE L1 -6 6327 6098 1819 175 19 40 chr5 194735171 194735548 -4894602 - L1MC1 LINE L1 0 6333 5965 2357 85 0 0 chr5 194735548 194735870 -4894280 - AluSp SINE Alu 0 322 1 1602 122 123 96 chr5 194736223 194736678 -4893472 - L1MB3 LINE L1 -229 5939 5483 3212 155 61 18 chr5 194736683 194737291 -4892859 - L1MC1 LINE L1 0 6333 5700 9789 164 99 29 chr5 194737291 194739570 -4890580 - L1MCa LINE L1 -3987 2439 1 2212 119 3 3 chr5 194739580 194739890 -4890260 - AluSg SINE Alu 0 310 1 327 244 157 35 chr5 194739895 194740010 -4890140 - L1MC5 LINE L1 -54 7907 7779 1039 295 25 28 chr5 194740027 194740461 -4889689 + L1MC4a LINE L1 5581 6013 -1778 297 151 0 0 chr5 194740557 194740610 -4889540 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 269 232 203 49 chr5 194740675 194740885 -4889265 - MIR SINE MIR -12 250 19 2191 132 3 0 chr5 194741594 194741898 -4888252 + AluSp SINE Alu 1 305 -8 556 105 0 0 chr5 194741901 194741977 -4888173 + MADE1 DNA Mariner 3 78 -2 737 270 232 22 chr5 194741978 194742348 -4887802 - L2 LINE L2 -18 3295 2848 184 246 246 0 chr5 194742388 194742445 -4887705 + L2 LINE L2 3197 3267 -5 2326 92 0 7 chr5 194743302 194743607 -4886543 + AluSp SINE Alu 1 303 -10 762 226 135 40 chr5 194744493 194744789 -4885361 + MLT1D LTR MaLR 18 341 -164 460 217 159 45 chr5 194744789 194744838 -4885312 - MLT2D LTR ERVL 0 414 372 243 0 0 0 chr5 194744838 194744865 -4885285 + (CA)n Simple_repeat Simple_repeat 1 27 0 460 217 159 45 chr5 194744865 194745024 -4885126 - MLT2D LTR ERVL -42 372 240 236 231 0 0 chr5 194745108 194745160 -4884990 + LTR30 LTR ERV1 1 52 -670 1337 123 0 72 chr5 194745160 194745411 -4884739 + LTR12 LTR ERV1 53 285 -429 236 239 57 11 chr5 194745411 194745499 -4884651 + LTR30 LTR ERV1 552 643 -79 656 148 0 0 chr5 194745500 194745601 -4884549 + LTR12 LTR ERV1 481 581 -133 611 275 16 0 chr5 194745601 194745790 -4884360 - MLT2B1 LTR ERVL -319 201 10 405 281 163 13 chr5 194745780 194745800 -4884350 + MLT1D LTR MaLR 323 339 -166 * 2065 103 3 52 chr5 194745800 194746110 -4884040 + AluSx SINE Alu 1 295 -17 405 281 163 13 chr5 194746110 194746242 -4883908 + MLT1D LTR MaLR 339 498 -7 291 373 28 16 chr5 194746401 194746653 -4883497 - L1MC/D LINE L1 -2002 5806 5552 289 317 20 0 chr5 194747257 194747358 -4882792 - MIR3 SINE MIR -21 187 85 330 282 40 88 chr5 194747588 194747815 -4882335 + L2 LINE L2 2963 3178 -94 249 33 0 0 chr5 194747860 194747890 -4882260 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 382 275 100 42 chr5 194747923 194748043 -4882107 + MIR3 SINE MIR 15 141 -67 1418 201 60 0 chr5 194748129 194748382 -4881768 - MER47A DNA MER2_type -1958 365 88 2258 97 0 0 chr5 194748382 194748670 -4881480 + AluSp SINE Alu 1 288 -25 1418 201 60 0 chr5 194748670 194748735 -4881415 - MER47A DNA MER2_type -2235 88 28 243 200 67 0 chr5 194748939 194748999 -4881151 - MLT1H LTR MaLR -482 67 4 2192 107 0 0 chr5 194749246 194749551 -4880599 + AluSx SINE Alu 1 305 0 1351 194 167 25 chr5 194749868 194750276 -4879874 + MLT1C LTR MaLR 1 466 -1 549 214 223 38 chr5 194750343 194750581 -4879569 - Charlie8 DNA MER1_type -2132 285 4 852 215 72 67 chr5 194750592 194750772 -4879378 + MER58A DNA MER1_type 1 184 -2236 2489 80 3 0 chr5 194750772 194751071 -4879079 - AluSp SINE Alu -8 305 6 852 215 72 67 chr5 194751071 194751113 -4879037 + MER58A DNA MER1_type 184 224 0 282 271 31 31 chr5 194752331 194752427 -4877723 + MLT1G LTR MaLR 495 590 0 1914 187 54 48 chr5 194752518 194753020 -4877130 + MLT1D LTR MaLR 1 505 0 586 272 52 14 chr5 194753029 194753242 -4876908 + LTR33 LTR ERVL 23 243 -278 441 225 42 14 chr5 194753295 194753437 -4876713 + LTR33 LTR ERVL 376 521 0 291 339 32 10 chr5 194753576 194753712 -4876438 + MIR SINE MIR 15 149 -59 309 155 0 0 chr5 194754032 194754090 -4876060 + GA-rich Low_complexity Low_complexity 1 58 0 262 282 71 0 chr5 194754338 194754423 -4875727 + MER91C DNA MER1_type 48 138 -2 894 306 94 12 chr5 194754881 194755286 -4874864 - MLT1K LTR MaLR -8 580 143 1644 153 30 17 chr5 194755400 194755422 -4874728 - AluJo SINE Alu -8 304 284 342 0 0 0 chr5 194755422 194755460 -4874690 + (TG)n Simple_repeat Simple_repeat 1 38 0 1644 153 30 17 chr5 194755460 194755737 -4874413 - AluJo SINE Alu -28 284 1 580 293 161 34 chr5 194756132 194756221 -4873929 - MLT1K LTR MaLR -8 580 504 1543 170 29 4 chr5 194756221 194756497 -4873653 + AluJb SINE Alu 3 285 -27 243 0 0 0 chr5 194756497 194756524 -4873626 + (CATA)n Simple_repeat Simple_repeat 2 28 0 2290 82 0 0 chr5 194756529 194756844 -4873306 + AluSg SINE Alu 1 315 0 580 293 161 34 chr5 194756844 194757193 -4872957 - MLT1K LTR MaLR -87 501 77 417 317 7 7 chr5 194758001 194758143 -4872007 + MIR3 SINE MIR 63 204 -4 323 355 102 25 chr5 194758780 194758977 -4871173 + MIR SINE MIR 8 219 -43 309 305 95 0 chr5 194759214 194759309 -4870841 - MIR SINE MIR -58 150 47 297 303 138 0 chr5 194759673 194759782 -4870368 + MIR SINE MIR 45 168 -94 436 280 111 10 chr5 194760278 194760485 -4869665 + MLT1K LTR MaLR 4 231 -357 259 289 121 23 chr5 194760678 194760851 -4869299 + MLT1K LTR MaLR 412 614 -1 234 287 103 0 chr5 194761332 194761419 -4868731 + MER91A DNA MER1_type 95 190 -6 1753 259 45 26 chr5 194761477 194761983 -4868167 - MER113 DNA MER1_type? -2 519 4 352 356 39 34 chr5 194761984 194762192 -4867958 - L2 LINE L2 -6 3307 3099 267 354 20 5 chr5 194762714 194762837 -4867313 + MIR SINE MIR 28 148 -61 243 0 0 0 chr5 194762993 194763020 -4867130 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 355 295 299 19 chr5 194763041 194763312 -4866838 - L2 LINE L2 -42 3271 2925 346 294 91 7 chr5 194764111 194764254 -4865896 + L2 LINE L2 2995 3149 -164 1362 105 0 0 chr5 194764260 194764441 -4865709 + AluSg SINE Alu 1 181 -129 1168 99 58 0 chr5 194764450 194764697 -4865453 + AluYa5 SINE Alu 99 355 0 355 348 43 7 chr5 194764703 194764841 -4865309 + L2 LINE L2 3164 3306 -7 188 298 41 74 chr5 194766122 194766243 -4863907 + MIR SINE MIR 118 234 -28 398 296 191 31 chr5 194767195 194767583 -4862567 + L2 LINE L2 2842 3291 -22 272 240 21 104 chr5 194767810 194767870 -4862280 + MIR SINE MIR 102 153 -109 2055 116 3 26 chr5 194767870 194768173 -4861977 + AluSx SINE Alu 1 296 -16 272 240 21 104 chr5 194768173 194768208 -4861942 + MIR SINE MIR 153 189 -73 988 301 88 32 chr5 194768266 194768820 -4861330 - MLT1K LTR MaLR -2 586 2 888 324 51 36 chr5 194769119 194769775 -4860375 + L2 LINE L2 2643 3311 -2 217 262 100 28 chr5 194769803 194769921 -4860229 - MIR SINE MIR -74 134 6 181 239 43 76 chr5 194771874 194771966 -4858184 + MIR SINE MIR 99 187 -75 183 222 208 42 chr5 194772011 194772083 -4858067 - L2 LINE L2 0 3272 3189 593 230 6 0 chr5 194772183 194772361 -4857789 + (CA)n Simple_repeat Simple_repeat 1 179 0 306 241 12 19 chr5 194772808 194772970 -4857180 + (TG)n Simple_repeat Simple_repeat 2 162 0 256 209 0 58 chr5 194772982 194773068 -4857082 + (TG)n Simple_repeat Simple_repeat 2 82 0 234 231 22 5 chr5 194773084 194773279 -4856871 + (TG)n Simple_repeat Simple_repeat 1 198 0 293 195 16 43 chr5 194773294 194773479 -4856671 + (TG)n Simple_repeat Simple_repeat 1 180 0 220 197 13 13 chr5 194773552 194773628 -4856522 + (TG)n Simple_repeat Simple_repeat 1 76 0 424 200 16 16 chr5 194773645 194773898 -4856252 + (TG)n Simple_repeat Simple_repeat 1 253 0 316 229 12 18 chr5 194773915 194774085 -4856065 + (TG)n Simple_repeat Simple_repeat 2 170 0 324 175 19 10 chr5 194774159 194774262 -4855888 + (TG)n Simple_repeat Simple_repeat 1 104 0 495 207 58 8 chr5 194774325 194774446 -4855704 - MER106A DNA MER1_type -2 234 108 209 176 0 0 chr5 194774447 194774481 -4855669 + (TG)n Simple_repeat Simple_repeat 1 34 0 401 272 101 19 chr5 194774656 194774814 -4855336 - MER5A DNA MER1_type 0 189 19 7082 76 1 4 chr5 194775227 194776245 -4853905 - HERVK9 LTR ERVK -3107 2809 1795 230 223 22 58 chr5 194776430 194776569 -4853581 + (TG)n Simple_repeat Simple_repeat 1 134 0 183 244 16 8 chr5 194776780 194776907 -4853243 + (TG)n Simple_repeat Simple_repeat 2 129 0 276 213 25 0 chr5 194776923 194777045 -4853105 + (TG)n Simple_repeat Simple_repeat 1 125 0 256 206 15 15 chr5 194777069 194777137 -4853013 + (TG)n Simple_repeat Simple_repeat 1 68 0 280 182 16 64 chr5 194777154 194777341 -4852809 + (TG)n Simple_repeat Simple_repeat 1 178 0 486 233 58 0 chr5 194777404 194777524 -4852626 - MER106A DNA MER1_type -2 234 108 209 176 0 0 chr5 194777525 194777559 -4852591 + (TG)n Simple_repeat Simple_repeat 1 34 0 401 272 101 19 chr5 194777735 194777893 -4852257 - MER5A DNA MER1_type 0 189 19 501 151 0 0 chr5 194779185 194779271 -4850879 + (TG)n Simple_repeat Simple_repeat 2 87 0 743 314 18 0 chr5 194779349 194779575 -4850575 + MIR SINE MIR 32 261 -1 1282 244 6 6 chr5 194780188 194780499 -4849651 - AluJo SINE Alu -1 311 1 1259 267 84 23 chr5 194780517 194780959 -4849191 - MLT1K LTR MaLR -4 472 4 1690 162 17 3 chr5 194781077 194781542 -4848608 + AluJb SINE Alu 1 312 0 811 386 64 4 chr5 194781559 194782106 -4848044 + L3 LINE CR1 334 913 -664 313 287 22 99 chr5 194782116 194782297 -4847853 + MER5A DNA MER1_type 10 176 -13 343 324 29 43 chr5 194782787 194782994 -4847156 - L2 LINE L2 -268 3045 2842 476 240 70 0 chr5 194783021 194783150 -4847000 + MLT1I LTR MaLR 5 142 -267 579 181 154 7 chr5 194783202 194783351 -4846799 + MLT1I LTR MaLR 239 409 0 458 336 23 59 chr5 194783501 194783721 -4846429 + MIR SINE MIR 19 230 -32 1962 113 34 3 chr5 194783722 194783887 -4846263 - AluSx SINE Alu -12 300 121 243 0 0 0 chr5 194783887 194783914 -4846236 + (TG)n Simple_repeat Simple_repeat 2 28 0 1962 113 34 3 chr5 194783914 194784039 -4846111 - AluSx SINE Alu -191 121 1 324 0 0 0 chr5 194784260 194784296 -4845854 + (CA)n Simple_repeat Simple_repeat 2 37 0 848 256 60 41 chr5 194784405 194784823 -4845327 + Charlie8 DNA MER1_type 62 487 -1930 269 206 32 0 chr5 194784811 194784874 -4845276 + Charlie8 DNA MER1_type 2350 2414 -3 * 249 317 10 20 chr5 194785058 194785159 -4844991 - MIR SINE MIR -86 122 22 23 68 0 0 chr5 194785566 194785610 -4844540 + GC_rich Low_complexity Low_complexity 1 44 0 27 29 0 0 chr5 194785796 194785830 -4844320 + GC_rich Low_complexity Low_complexity 1 34 0 209 132 0 19 chr5 194786116 194786169 -4843981 + (CCCG)n Simple_repeat Simple_repeat 4 55 0 185 304 0 0 chr5 194787724 194787770 -4842380 + L2 LINE L2 3224 3269 -3 391 242 33 98 chr5 194791405 194791558 -4838592 + MIR3 SINE MIR 26 168 -40 428 264 121 21 chr5 194792065 194792205 -4837945 + MIR SINE MIR 108 261 -1 22 109 0 0 chr5 194793211 194793303 -4836847 + GC_rich Low_complexity Low_complexity 1 92 0 26 30 0 0 chr5 194793356 194793389 -4836761 + GC_rich Low_complexity Low_complexity 1 33 0 197 250 196 9 chr5 194793713 194793825 -4836325 - MIR3 SINE MIR -63 145 13 224 268 219 0 chr5 194793921 194794044 -4836106 - MIR SINE MIR -54 208 59 297 335 91 57 chr5 194794393 194794724 -4835426 - L3 LINE CR1 -171 1406 1065 496 268 61 98 chr5 194794755 194795184 -4834966 - MLT1K LTR MaLR -22 566 154 236 264 103 84 chr5 194795184 194795339 -4834811 - L3 LINE CR1 -812 765 608 1178 15 0 0 chr5 194795405 194795535 -4834615 + AluY SINE Alu 1 130 -181 2488 77 0 0 chr5 194795540 194795851 -4834299 + AluY SINE Alu 1 311 0 497 369 96 16 chr5 194795865 194796177 -4833973 - L3 LINE CR1 -1030 547 211 632 253 93 21 chr5 194796971 194797165 -4832985 + MER63A DNA MER1_type 3 210 0 707 264 70 47 chr5 194797396 194797641 -4832509 + MIR SINE MIR 14 258 -4 472 339 42 34 chr5 194798353 194798707 -4831443 - L2 LINE L2 -576 2738 2382 187 330 174 0 chr5 194798953 194799068 -4831082 + L3 LINE CR1 1261 1395 -182 228 250 56 0 chr5 194799802 194799874 -4830276 + MLT1K LTR MaLR 506 581 -7 358 165 47 12 chr5 194799994 194800079 -4830071 + Charlie8 DNA MER1_type 95 182 -2235 189 184 82 0 chr5 194801096 194801145 -4829005 - MIR SINE MIR -95 113 61 275 262 16 0 chr5 194801263 194801324 -4828826 - L2 LINE L2 -7 3265 3204 286 198 62 52 chr5 194801371 194801467 -4828683 - L2 LINE L2 -211 3061 2965 3940 143 22 28 chr5 194801943 194802061 -4828089 - L1MB5 LINE L1 -1 6173 6056 2397 53 10 0 chr5 194802061 194802362 -4827788 - AluY SINE Alu -7 304 1 3940 143 22 28 chr5 194802362 194802599 -4827551 - L1MB5 LINE L1 -118 6056 5819 2417 94 0 0 chr5 194802599 194802906 -4827244 - AluSx SINE Alu -5 307 1 3940 143 22 28 chr5 194802906 194803222 -4826928 - L1MB5 LINE L1 -355 5819 5505 494 296 110 26 chr5 194803923 194804187 -4825963 + L2 LINE L2 2957 3242 -71 371 152 13 0 chr5 194804192 194804271 -4825879 + (TGGA)n Simple_repeat Simple_repeat 4 83 0 2165 104 6 16 chr5 194804272 194804583 -4825567 + AluSg SINE Alu 1 306 -4 1098 119 6 19 chr5 194804581 194805088 -4825062 + (TGGA)n Simple_repeat Simple_repeat 1 500 0 1470 143 0 0 chr5 194805302 194805518 -4824632 - AluSg/x SINE Alu -19 293 78 521 163 11 33 chr5 194805787 194805971 -4824179 + (TG)n Simple_repeat Simple_repeat 1 180 0 456 226 0 0 chr5 194805982 194806137 -4824013 + (TG)n Simple_repeat Simple_repeat 1 155 0 2193 116 0 0 chr5 194807022 194807333 -4822817 - AluSx SINE Alu -1 311 1 235 326 11 22 chr5 194807342 194807434 -4822716 - MIR SINE MIR -70 192 102 266 375 0 0 chr5 194807451 194807547 -4822603 + MIR SINE MIR 161 256 -6 314 270 42 53 chr5 194807562 194807685 -4822465 + MIR SINE MIR 67 192 -62 255 413 18 12 chr5 194807752 194807919 -4822231 - L2 LINE L2 -462 2852 2685 2545 142 34 12 chr5 194808279 194808696 -4821454 - L1PA15 LINE L1 0 6165 5740 2258 79 20 0 chr5 194808835 194809140 -4821010 - AluY SINE Alu 0 311 1 314 333 65 40 chr5 194809182 194809383 -4820767 - L2 LINE L2 -9 3304 3099 623 84 11 0 chr5 194809802 194809897 -4820253 + (TC)n Simple_repeat Simple_repeat 1 96 0 258 32 0 0 chr5 194810864 194810895 -4819255 + (TG)n Simple_repeat Simple_repeat 2 32 0 183 288 0 85 chr5 194811540 194811599 -4818551 + MIR SINE MIR 118 171 -91 329 250 70 31 chr5 194813080 194813208 -4816942 - L2 LINE L2 0 3313 3181 204 379 30 18 chr5 194813406 194813575 -4816575 + L2 LINE L2 2721 2891 -423 652 276 80 78 chr5 194813591 194814066 -4816084 - MLT1K LTR MaLR 0 476 1 1602 114 29 123 chr5 194814942 194815292 -4814858 - AluYb8 SINE Alu -1 317 1 593 251 89 22 chr5 194816534 194816713 -4813437 + MIR SINE MIR 2 192 -70 507 221 7 40 chr5 194816757 194816906 -4813244 + L1ME1 LINE L1 5585 5728 -438 4497 113 42 8 chr5 194816906 194817046 -4813104 + L1PB1 LINE L1 5344 5478 -673 2518 53 0 0 chr5 194817046 194817349 -4812801 + AluY SINE Alu 1 303 -8 4497 113 42 8 chr5 194817349 194817986 -4812164 + L1PB1 LINE L1 5478 6148 -3 2313 109 3 0 chr5 194818010 194818322 -4811828 + AluSq SINE Alu 1 313 0 814 285 168 5 chr5 194818338 194818724 -4811426 + L1ME1 LINE L1 5715 6163 -3 212 250 31 0 chr5 194820492 194820556 -4809594 + L2 LINE L2 2909 2974 -339 538 309 162 13 chr5 194820753 194821141 -4809009 - L2 LINE L2 -50 3263 2818 213 255 20 0 chr5 194821643 194821694 -4808456 + L2 LINE L2 3016 3067 -205 434 135 54 63 chr5 194825416 194825527 -4804623 + Charlie8 DNA MER1_type 53 162 -2255 2076 101 35 0 chr5 194825531 194825818 -4804332 + AluSx SINE Alu 1 297 -15 358 267 11 0 chr5 194825937 194826027 -4804123 - MIR SINE MIR -84 124 34 405 199 233 20 chr5 194827332 194827478 -4802672 + MIR SINE MIR 15 191 -71 288 247 134 9 chr5 194828143 194828258 -4801892 + MIR SINE MIR 34 164 -60 552 124 26 13 chr5 194828467 194828620 -4801530 + (CA)n Simple_repeat Simple_repeat 1 155 0 359 347 171 9 chr5 194829054 194829400 -4800750 - L2 LINE L2 -17 3296 2895 248 28 56 0 chr5 194830500 194830536 -4799614 + (TCTCTG)n Simple_repeat Simple_repeat 2 39 0 536 305 141 15 chr5 194830956 194831225 -4798925 - L2 LINE L2 -3 3269 2967 266 261 35 56 chr5 194831236 194831378 -4798772 - MLT1K LTR MaLR -31 557 419 255 356 30 79 chr5 194832731 194832933 -4797217 - L2 LINE L2 -93 3179 2988 855 270 130 8 chr5 194833024 194833559 -4796591 + L2 LINE L2 2714 3309 -4 305 140 18 0 chr5 194833720 194833777 -4796373 + (CA)n Simple_repeat Simple_repeat 2 59 0 312 286 22 0 chr5 194834527 194834618 -4795532 - L2 LINE L2 -229 3043 2951 841 82 0 15 chr5 194834947 194835081 -4795069 + (GGAA)n Simple_repeat Simple_repeat 2 133 0 437 284 75 15 chr5 194837281 194837415 -4792735 - MIR SINE MIR -40 222 81 299 324 14 29 chr5 194838429 194838568 -4791582 - MIR SINE MIR -70 192 56 216 317 68 31 chr5 194839246 194839407 -4790743 - L2 LINE L2 -260 3053 2887 219 246 0 0 chr5 194839758 194839815 -4790335 + CT-rich Low_complexity Low_complexity 5 61 0 283 297 14 29 chr5 194839852 194839990 -4790160 + CT-rich Low_complexity Low_complexity 3 138 0 218 295 15 7 chr5 194840099 194840182 -4789968 + CT-rich Low_complexity Low_complexity 4 137 0 185 196 20 0 chr5 194840480 194840531 -4789619 + CT-rich Low_complexity Low_complexity 2 53 0 239 360 75 21 chr5 194840975 194841161 -4788989 - L2 LINE L2 -549 2765 2570 214 327 0 0 chr5 194841368 194841423 -4788727 - L2 LINE L2 -14 3258 3204 312 140 35 0 chr5 194841625 194841682 -4788468 + MIR SINE MIR 89 147 -61 231 281 16 0 chr5 194843040 194843104 -4787046 + GA-rich Low_complexity Low_complexity 2 66 0 38 0 0 0 chr5 194844629 194844667 -4785483 + AT_rich Low_complexity Low_complexity 1 38 0 227 199 32 70 chr5 194848345 194848501 -4781649 + (CACAC)n Simple_repeat Simple_repeat 5 154 0 217 303 53 7 chr5 194849230 194849382 -4780768 + (CCCA)n Simple_repeat Simple_repeat 3 161 0 229 279 19 67 chr5 194850041 194850145 -4780005 - MIR SINE MIR -79 129 31 198 293 165 15 chr5 194851085 194851218 -4778932 - L2 LINE L2 -1 3312 3160 588 325 112 14 chr5 194851410 194851903 -4778247 + L2 LINE L2 2082 2622 -692 190 251 110 46 chr5 194855185 194855404 -4774746 - L2 LINE L2 -213 3059 2827 23 0 0 0 chr5 194857182 194857205 -4772945 + AT_rich Low_complexity Low_complexity 1 23 0 489 291 97 24 chr5 194859645 194859851 -4770299 - MIR SINE MIR -27 235 15 243 235 184 10 chr5 194859841 194859939 -4770211 - MIR SINE MIR -64 144 30 * 2327 107 0 0 chr5 194861741 194862031 -4768119 - AluSg SINE Alu -20 290 1 543 284 103 60 chr5 194862131 194862270 -4767880 + L3 LINE CR1 1169 1301 -276 2042 119 28 14 chr5 194862270 194862555 -4767595 + AluSx SINE Alu 5 293 -19 543 284 103 60 chr5 194862555 194862764 -4767386 + L3 LINE CR1 1301 1532 -45 805 212 12 18 chr5 194864209 194864374 -4765776 - FRAM SINE Alu -12 164 1 212 302 0 73 chr5 194866731 194866827 -4763323 + MIR SINE MIR 100 188 -74 408 358 121 13 chr5 194868377 194868690 -4761460 - L2 LINE L2 -2 3311 2965 221 301 34 1 chr5 194869456 194869554 -4760596 - MIR SINE MIR -69 139 40 309 257 29 29 chr5 194869683 194869788 -4760362 + MIR SINE MIR 56 160 -102 348 318 58 26 chr5 194870242 194870431 -4759719 + MIR SINE MIR 51 245 -17 2415 81 7 0 chr5 194871090 194871386 -4758764 - AluY SINE Alu -11 300 3 2287 96 7 0 chr5 194871388 194871689 -4758461 - AluSq SINE Alu -10 303 1 273 219 0 16 chr5 194871742 194871806 -4758344 - MIR SINE MIR -61 147 90 271 204 204 0 chr5 194872741 194872839 -4757311 - L2 LINE L2 -2 3270 3153 401 281 44 30 chr5 194873093 194873228 -4756922 + MIR SINE MIR 76 212 -50 263 146 18 0 chr5 194874837 194874892 -4755258 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 208 200 157 14 chr5 194874971 194875041 -4755109 + L2 LINE L2 3180 3259 -54 1763 174 7 13 chr5 194875169 194875468 -4754682 + AluJb SINE Alu 1 297 -15 278 344 94 0 chr5 194877604 194877732 -4752418 + L2 LINE L2 3125 3264 -8 2239 104 7 14 chr5 194877768 194878065 -4752085 + AluSx SINE Alu 1 295 -17 334 276 125 13 chr5 194878343 194878495 -4751655 + MIR SINE MIR 5 173 -89 272 203 135 14 chr5 194878495 194878569 -4751581 - LTR16C LTR ERVL 0 491 409 434 304 35 0 chr5 194878569 194878684 -4751466 - MER96 DNA MER1_type? 0 175 57 728 273 168 12 chr5 194878732 194879066 -4751084 - LTR16C LTR ERVL -102 389 4 211 286 126 34 chr5 194879466 194879585 -4750565 - MIR SINE MIR -29 233 104 426 235 144 15 chr5 194880150 194880282 -4749868 + MIR SINE MIR 111 259 -3 23 0 0 0 chr5 194881349 194881372 -4748778 + AT_rich Low_complexity Low_complexity 1 23 0 183 353 52 73 chr5 194881830 194881966 -4748184 - MIR SINE MIR -11 251 119 229 290 140 10 chr5 194882848 194882948 -4747202 - MIR SINE MIR 0 262 150 534 232 73 115 chr5 194884052 194884678 -4745472 + L1ME4a LINE L1 5522 6121 0 190 213 93 53 chr5 194885912 194885987 -4744163 + L3b LINE CR1 1339 1416 -167 286 298 152 28 chr5 194886155 194886333 -4743817 + MIR SINE MIR 63 262 0 2448 93 6 0 chr5 194887115 194887426 -4742724 + AluSp SINE Alu 1 313 0 27 0 0 0 chr5 194887654 194887681 -4742469 + AT_rich Low_complexity Low_complexity 1 27 0 966 206 37 14 chr5 194888439 194888657 -4741493 - MER58A DNA MER1_type 0 224 2 250 288 14 14 chr5 194888657 194888730 -4741420 - L3 LINE CR1 -46 1531 1459 1249 145 0 5 chr5 194888731 194888917 -4741233 - AluSp SINE Alu -9 304 120 2410 83 0 16 chr5 194888917 194889230 -4740920 - AluSx SINE Alu -4 308 1 260 305 86 13 chr5 194889513 194889664 -4740486 - MIR SINE MIR -66 196 35 * 482 364 23 30 chr5 194889653 194889917 -4740233 - L3 LINE CR1 -403 1174 913 247 281 58 29 chr5 194889915 194889959 -4740191 + L2 LINE L2 3095 3136 -177 * 1977 154 3 10 chr5 194889959 194890271 -4739879 + AluJb SINE Alu 3 312 0 247 281 58 29 chr5 194890271 194890397 -4739753 + L2 LINE L2 3136 3270 -43 234 191 0 21 chr5 194890534 194890581 -4739569 - LTR67 LTR ERVL -370 187 142 838 252 76 13 chr5 194890940 194891178 -4738972 - L3 LINE CR1 -730 847 595 260 349 96 14 chr5 194891215 194891361 -4738789 - L2 LINE L2 -8 3264 3107 198 209 47 0 chr5 194891545 194891588 -4738562 + L3 LINE CR1 1526 1570 -7 495 238 9 0 chr5 194891628 194891733 -4738417 - L3 LINE CR1 -1039 538 433 293 220 220 21 chr5 194892135 194892235 -4737915 - MIR SINE MIR -14 248 169 2248 108 0 3 chr5 194892235 194892530 -4737620 - AluSg SINE Alu -16 294 1 293 220 220 21 chr5 194892530 194892570 -4737580 - MIR SINE MIR -93 169 80 198 71 0 0 chr5 194892570 194892598 -4737552 + (A)n Simple_repeat Simple_repeat 1 28 0 471 272 136 25 chr5 194893209 194893444 -4736706 + MIR SINE MIR 2 262 0 2169 142 0 0 chr5 194894066 194894376 -4735774 + AluSx SINE Alu 1 310 -2 909 146 39 34 chr5 194894399 194894454 -4735696 - MER3 DNA MER1_type -30 179 126 2119 140 3 0 chr5 194894454 194894754 -4735396 + AluSq SINE Alu 1 301 -12 909 146 39 34 chr5 194894754 194894876 -4735274 - MER3 DNA MER1_type -83 126 1 212 320 27 13 chr5 194894877 194894952 -4735198 + L2 LINE L2 79 154 -3160 209 147 0 0 chr5 194895057 194895091 -4735059 + L2 LINE L2 668 701 -2613 276 277 48 0 chr5 194895110 194895193 -4734957 + L2 LINE L2 669 755 -2559 828 237 26 0 chr5 194895213 194895403 -4734747 + MER105 DNA DNA 1 195 -9 1316 271 80 10 chr5 194895416 194895903 -4734247 + L2 LINE L2 840 1360 -1954 353 154 15 0 chr5 194895936 194896001 -4734149 - L1MB8 LINE L1 -7 6171 6106 510 223 0 0 chr5 194896005 194896108 -4734042 + AluSg/x SINE Alu 169 271 -39 4428 208 58 44 chr5 194896108 194896354 -4733796 - L1 LINE L1 -868 5278 5037 363 204 133 21 chr5 194896354 194896459 -4733691 - FLAM_A SINE Alu -18 115 9 4428 208 58 44 chr5 194896459 194896858 -4733292 - L1 LINE L1 -1109 5037 4645 2437 84 0 19 chr5 194896858 194897166 -4732984 - AluSp SINE Alu -11 302 1 4428 208 58 44 chr5 194897166 194897944 -4732206 - L1 LINE L1 -1501 4645 3818 942 263 45 7 chr5 194897946 194898235 -4731915 + L2 LINE L2 1394 1693 -1621 1382 278 127 33 chr5 194898244 194898884 -4731266 + L2 LINE L2 2272 2971 -343 679 190 104 32 chr5 194949072 194949293 -4680857 - L1M4 LINE L1 -1165 4981 4745 389 279 99 0 chr5 194949329 194949440 -4680710 + L2 LINE L2 3191 3312 -1 334 330 104 28 chr5 194949464 194949752 -4680398 - L2 LINE L2 -1649 1665 1356 1135 146 29 0 chr5 194949957 194950128 -4680022 - AluSp SINE Alu -9 304 129 2341 94 0 19 chr5 194950139 194950447 -4679703 - AluSc SINE Alu -7 302 1 2230 95 0 31 chr5 194950454 194950771 -4679379 - AluSx SINE Alu -5 307 1 2216 115 7 0 chr5 194950806 194951101 -4679049 - AluSp SINE Alu -16 297 1 183 80 0 0 chr5 194951134 194951159 -4678991 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1092 123 293 14 chr5 194951191 194951428 -4678722 - AluSg1 SINE Alu 0 304 9 557 192 8 25 chr5 194951525 194951645 -4678505 - FLAM_C SINE Alu -16 127 10 334 329 32 13 chr5 194951971 194952129 -4678021 + MIR SINE MIR 37 197 -65 204 267 139 12 chr5 194952212 194952293 -4677857 - MIR SINE MIR -86 176 84 1581 123 93 109 chr5 194952293 194952401 -4677749 + MER46B DNA MER2_type 1 109 -2622 1801 140 25 35 chr5 194952401 194952416 -4677734 - AluJb SINE Alu -1 311 297 2162 140 13 0 chr5 194952416 194952724 -4677426 - AluJo SINE Alu 0 312 1 1801 140 25 35 chr5 194952724 194952880 -4677270 - AluJb SINE Alu -15 297 142 2302 119 0 0 chr5 194952880 194953190 -4676960 - AluSx SINE Alu -2 310 1 1801 140 25 35 chr5 194953190 194953331 -4676819 - AluJb SINE Alu -170 142 1 1581 123 93 109 chr5 194953331 194953589 -4676561 + MER46B DNA MER2_type 109 236 0 2348 71 14 3 chr5 194953765 194954062 -4676088 - AluSq SINE Alu -13 300 1 469 243 26 40 chr5 194954064 194954090 -4676060 - MER58 DNA MER1_type -191 150 125 1841 171 10 19 chr5 194954090 194954399 -4675751 - AluJb SINE Alu -6 306 1 469 243 26 40 chr5 194954399 194954524 -4675626 - MER58 DNA MER1_type -216 125 1 428 200 12 35 chr5 194954765 194954850 -4675300 - AluJ/FLAM SINE Alu -217 85 3 1934 183 78 20 chr5 194955056 194955494 -4674656 + L1MB4 LINE L1 5587 6049 -131 900 211 98 25 chr5 194955490 194955752 -4674398 + L1MB7 LINE L1 5745 6029 -155 * 2060 88 50 0 chr5 194955752 194956035 -4674115 - AluSc SINE Alu -12 297 1 900 211 98 25 chr5 194956035 194956047 -4674103 + L1MB7 LINE L1 6029 6039 -145 786 217 103 29 chr5 194956135 194956416 -4673734 + L1MB4 LINE L1 5879 6180 0 2364 72 3 19 chr5 194956423 194956730 -4673420 + AluSx SINE Alu 1 302 -10 2505 41 0 10 chr5 194956807 194957099 -4673051 + AluY SINE Alu 1 289 -22 292 209 45 9 chr5 194957101 194957211 -4672939 + L1 LINE L1 3856 3969 -2177 7812 95 52 5 chr5 194957211 194958318 -4671832 + HSMAR1 DNA Mariner 1 1158 -129 2297 113 0 3 chr5 194958318 194958628 -4671522 + AluSx SINE Alu 1 309 -3 488 191 0 0 chr5 194958701 194958785 -4671365 - Tigger5 DNA MER2_type -1 2322 2239 667 186 26 83 chr5 194958853 194959117 -4671033 + L1 LINE L1 4411 4659 -1487 508 122 0 14 chr5 194959215 194959289 -4670861 - Tigger5 DNA MER2_type 0 2323 2251 276 143 86 14 chr5 194959302 194959372 -4670778 - Tigger5 DNA MER2_type 0 2323 2249 228 273 0 0 chr5 194959341 194959396 -4670754 - Tigger5 DNA MER2_type -2268 55 1 * 427 228 89 51 chr5 194959401 194959543 -4670607 + L1ME4a LINE L1 4694 4853 -1293 2393 75 7 3 chr5 194959543 194959838 -4670312 - AluSp SINE Alu -17 296 1 427 228 89 51 chr5 194959838 194959924 -4670226 + L1ME4a LINE L1 4853 4934 -1212 242 239 14 14 chr5 194960064 194960135 -4670015 + AluS SINE Alu 7 77 -223 307 198 56 56 chr5 194960256 194960376 -4669774 + L1MC5 LINE L1 7536 7656 -300 2381 75 0 7 chr5 194960376 194960669 -4669481 + AluY SINE Alu 1 291 -20 2281 101 0 10 chr5 194960678 194960975 -4669175 + AluSg SINE Alu 1 294 -16 2347 65 7 14 chr5 194960988 194961282 -4668868 + AluY SINE Alu 1 292 -19 345 230 91 30 chr5 194961284 194961449 -4668701 + L1MC5 LINE L1 7755 7929 -32 452 276 131 36 chr5 194962079 194962300 -4667850 + MIR SINE MIR 21 262 0 266 277 89 9 chr5 194962760 194962872 -4667278 + MIR SINE MIR 48 168 -94 2070 107 37 10 chr5 194963411 194963710 -4666440 + AluSg1 SINE Alu 1 307 -2 321 89 0 0 chr5 194964214 194964259 -4665891 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 207 0 0 0 chr5 194964566 194964589 -4665561 + (T)n Simple_repeat Simple_repeat 1 23 0 273 258 101 56 chr5 194964974 194965152 -4664998 + L1ME4a LINE L1 5354 5539 -582 1830 169 3 19 chr5 194965235 194965543 -4664607 - AluJo SINE Alu -9 303 1 186 288 13 137 chr5 194965616 194965769 -4664381 + L2 LINE L2 3037 3170 -102 274 304 117 13 chr5 194966103 194966333 -4663817 + MLT1J LTR MaLR 229 482 -29 318 308 166 9 chr5 194966548 194966759 -4663391 + MLT1K LTR MaLR 335 578 -10 280 333 172 6 chr5 194967889 194968063 -4662087 - MIR SINE MIR 0 262 60 1182 238 130 49 chr5 194968127 194968779 -4661371 + L2 LINE L2 2632 3313 0 2388 85 10 0 chr5 194968930 194969237 -4660913 + AluY SINE Alu 1 310 -1 2161 139 3 0 chr5 194969625 194969935 -4660215 + AluJb SINE Alu 2 312 0 1981 159 0 13 chr5 194970687 194971002 -4659148 + AluJb SINE Alu 2 312 0 2164 142 20 12 chr5 194971115 194971459 -4658691 + MER7A DNA MER2_type 1 345 -1 552 265 96 27 chr5 194972493 194972712 -4657438 - MIR SINE MIR 0 262 29 302 273 139 26 chr5 194972732 194972999 -4657151 + L1ME4a LINE L1 5639 5935 -186 241 29 29 0 chr5 194973146 194973181 -4656969 + L1ME4a LINE L1 6083 6118 -3 2330 82 17 3 chr5 194973564 194973855 -4656295 - AluSq SINE Alu -18 295 1 2456 72 3 16 chr5 194974176 194974483 -4655667 + AluY SINE Alu 1 303 -8 925 314 12 121 chr5 194974488 194974819 -4655331 + AluJo SINE Alu 1 295 -7 1869 121 61 0 chr5 194974820 194975084 -4655066 + AluSx SINE Alu 1 280 -32 369 0 0 0 chr5 194975087 194975128 -4655022 + (CA)n Simple_repeat Simple_repeat 2 42 0 2261 163 66 60 chr5 194975432 194975773 -4654377 - MER68 LTR ERV1 -75 487 141 2182 114 26 7 chr5 194975773 194976080 -4654070 - AluSq SINE Alu 0 313 1 2261 163 66 60 chr5 194976080 194976222 -4653928 - MER68 LTR ERV1 -421 141 1 651 153 0 18 chr5 194976314 194976447 -4653703 + AluSg/x SINE Alu 174 304 0 997 116 0 0 chr5 194976677 194976806 -4653344 + AluSq/x SINE Alu 1 129 -183 611 252 39 0 chr5 194976861 194977016 -4653134 - MIR SINE MIR -23 239 79 291 236 160 9 chr5 194977381 194977487 -4652663 + L2 LINE L2 269 390 -2924 2026 147 10 0 chr5 194977514 194977807 -4652343 + AluSx SINE Alu 1 296 -16 2178 126 3 0 chr5 194977809 194978119 -4652031 + AluSx SINE Alu 1 311 -1 2106 62 3 100 chr5 194978136 194978457 -4651693 + AluSc SINE Alu 1 290 -19 2178 103 0 0 chr5 194978467 194978748 -4651402 + AluSq SINE Alu 1 281 -32 244 22 133 0 chr5 194978753 194978798 -4651352 + (AAATG)n Simple_repeat Simple_repeat 4 54 0 1904 111 64 4 chr5 194979117 194979397 -4650753 - AluSq SINE Alu -16 297 1 1794 146 64 0 chr5 194979398 194979678 -4650472 - AluJo SINE Alu -14 298 1 2245 128 3 0 chr5 194979795 194980101 -4650049 + AluSx SINE Alu 1 307 -5 339 164 0 29 chr5 194980761 194980829 -4649321 + FLAM_A SINE Alu 72 133 0 237 330 55 9 chr5 194980883 194980992 -4649158 + MIR SINE MIR 21 134 -74 1706 141 69 31 chr5 194981081 194981371 -4648779 + AluJo SINE Alu 1 301 -11 2165 116 17 0 chr5 194981376 194981669 -4648481 + AluSq SINE Alu 1 298 -15 1079 275 86 20 chr5 194981855 194982163 -4647987 + L2 LINE L2 2828 3177 -136 2454 61 3 3 chr5 194982163 194982457 -4647693 - AluY SINE Alu -17 294 1 1079 275 86 20 chr5 194982457 194982602 -4647548 + L2 LINE L2 3177 3311 -2 607 257 137 70 chr5 194982631 194982735 -4647415 - L2 LINE L2 -1 3312 3216 2046 139 3 10 chr5 194982735 194983036 -4647114 + AluSg SINE Alu 11 309 -1 607 257 137 70 chr5 194983036 194983385 -4646765 - L2 LINE L2 -97 3216 2737 2269 68 10 0 chr5 194983385 194983677 -4646473 - AluSp SINE Alu -18 295 1 607 257 137 70 chr5 194983677 194983833 -4646317 - L2 LINE L2 -576 2737 2593 340 275 34 20 chr5 194983839 194983988 -4646162 - L2 LINE L2 -916 2398 2248 195 364 0 30 chr5 194984039 194984138 -4646012 + MIR SINE MIR 56 151 -111 30 27 0 0 chr5 194985709 194985746 -4644404 + AT_rich Low_complexity Low_complexity 1 37 0 250 184 26 0 chr5 194985785 194985861 -4644289 + (TA)n Simple_repeat Simple_repeat 1 78 0 198 0 0 0 chr5 194985883 194985905 -4644245 + (CA)n Simple_repeat Simple_repeat 2 23 0 2160 84 27 13 chr5 194985926 194986224 -4643926 - AluSx SINE Alu -10 302 1 281 328 46 15 chr5 194986275 194986406 -4643744 - L2 LINE L2 -1 3271 3137 216 0 0 0 chr5 194986603 194986627 -4643523 + (CA)n Simple_repeat Simple_repeat 2 25 0 2244 80 27 10 chr5 194986648 194986948 -4643202 - AluSx SINE Alu -7 305 1 303 328 46 8 chr5 194986999 194987130 -4643020 - L2 LINE L2 -1 3271 3136 3129 227 87 2 chr5 194987412 194988424 -4641726 - L1ME1 LINE L1 -10 6156 5050 2117 108 0 46 chr5 194988448 194988754 -4641396 - AluSx SINE Alu -20 292 1 2215 131 0 7 chr5 194988802 194989108 -4641042 - AluSx SINE Alu -6 306 3 1714 122 26 16 chr5 194989198 194989502 -4640648 - LTR56 LTR ERV1 -118 327 21 2182 104 14 0 chr5 194989508 194989797 -4640353 - AluSx SINE Alu -19 293 1 1318 120 0 5 chr5 194989871 194990055 -4640095 + AluSg/x SINE Alu 120 302 -10 1387 163 108 24 chr5 194990107 194990395 -4639755 - AluJo SINE Alu 0 312 1 1880 95 63 21 chr5 194990491 194990776 -4639374 - AluSx SINE Alu 0 312 16 319 171 38 95 chr5 194990830 194990935 -4639215 - L1M4 LINE L1 -3060 3584 3486 225 0 0 0 chr5 194990945 194990970 -4639180 + (TA)n Simple_repeat Simple_repeat 1 25 0 234 178 0 84 chr5 194990970 194991047 -4639103 + MER21B LTR ERV1 27 95 -768 2643 64 0 0 chr5 194991156 194991467 -4638683 - AluY SINE Alu 0 311 1 1007 246 70 67 chr5 194991501 194991875 -4638275 + MER21B LTR ERV1 100 474 -389 315 228 0 0 chr5 194991879 194991936 -4638214 + AluJ/FLAM SINE Alu 1 57 -245 1623 151 0 32 chr5 194991951 194992230 -4637920 - MER50 LTR ERV1 -56 678 409 * 1867 161 22 10 chr5 194992205 194992516 -4637634 + MER21B LTR ERV1 500 814 -49 900 206 76 13 chr5 194992544 194992782 -4637368 - L1M4 LINE L1 -3143 3501 3249 1118 83 19 13 chr5 194992788 194992945 -4637205 + AluSx SINE Alu 1 158 -154 959 63 0 0 chr5 194992945 194993056 -4637094 - AluY SINE Alu -200 111 1 1630 113 97 20 chr5 194993062 194993362 -4636788 - L1MB7 LINE L1 -1 6183 5861 713 142 0 0 chr5 194993362 194993475 -4636675 - AluSp/q SINE Alu -5 308 196 2229 98 10 0 chr5 194993475 194993780 -4636370 - AluSx SINE Alu -2 310 3 1848 240 54 20 chr5 194993795 194994390 -4635760 - L1M4 LINE L1 -4739 1907 1293 2195 123 16 3 chr5 194994444 194994753 -4635397 - AluSq SINE Alu 0 313 1 453 143 0 12 chr5 194994753 194994830 -4635320 - AluSc SINE Alu -5 304 227 232 171 0 0 chr5 194994831 194994866 -4635284 - Alu SINE Alu -266 36 2 2147 109 7 7 chr5 194994866 194995160 -4634990 - AluSq SINE Alu -19 294 1 709 193 0 50 chr5 194995224 194995364 -4634786 + FLAM_A SINE Alu 1 133 0 1424 207 10 17 chr5 194995531 194995826 -4634324 - AluJo SINE Alu -19 293 1 2349 79 0 0 chr5 194995950 194996272 -4633878 - AluY SINE Alu 0 322 1 1528 199 3 20 chr5 194996344 194996636 -4633514 - AluJb SINE Alu -25 287 1 1857 139 0 69 chr5 194996645 194996977 -4633173 - AluJo SINE Alu -3 309 1 2048 154 3 0 chr5 194997455 194997766 -4632384 - AluSx SINE Alu 0 312 1 1245 119 0 6 chr5 194997913 194998081 -4632069 - AluSq SINE Alu -15 298 132 2329 72 7 20 chr5 194998084 194998389 -4631761 - AluSg SINE Alu -9 301 1 536 183 11 0 chr5 194998460 194998553 -4631597 - MLT1F LTR MaLR -71 471 378 435 234 0 54 chr5 194998667 194998778 -4631372 - MLT1F LTR MaLR -294 296 192 390 238 20 40 chr5 194999283 194999384 -4630766 + AluJb SINE Alu 180 278 -24 333 228 24 41 chr5 194999445 194999568 -4630582 - L1M4 LINE L1 -6359 183 63 1662 278 103 43 chr5 194999663 195000499 -4629651 + L2 LINE L2 2091 2976 -338 1489 183 0 81 chr5 195000533 195000866 -4629284 - AluJo SINE Alu -6 306 1 1948 151 20 0 chr5 195001301 195001330 -4628820 - AluSx SINE Alu -1 311 284 315 0 0 0 chr5 195001330 195001365 -4628785 + (TG)n Simple_repeat Simple_repeat 2 36 0 1948 151 20 0 chr5 195001365 195001640 -4628510 - AluSx SINE Alu -28 284 1 1502 153 3 101 chr5 195001905 195002231 -4627919 - AluJb SINE Alu -18 294 1 2551 69 0 3 chr5 195002354 195002660 -4627490 + AluY SINE Alu 1 305 -6 2295 107 3 0 chr5 195002797 195003096 -4627054 - AluSx SINE Alu -8 304 5 457 225 33 17 chr5 195003139 195003259 -4626891 - MER113 DNA MER1_type? -94 427 306 340 335 127 5 chr5 195003897 195004094 -4626056 + MIR SINE MIR 2 222 -40 520 257 79 35 chr5 195004396 195004598 -4625552 + MIR SINE MIR 37 247 -15 410 255 154 1 chr5 195004870 195005007 -4625143 + MIR SINE MIR 36 188 -74 1771 159 0 72 chr5 195005177 195005353 -4624797 - AluJb SINE Alu -3 309 167 1987 108 0 0 chr5 195005353 195005603 -4624547 - AluSx SINE Alu -58 254 5 1771 159 0 72 chr5 195005603 195005759 -4624391 - AluJb SINE Alu -145 167 1 184 296 0 0 chr5 195005795 195005839 -4624311 + MIR SINE MIR 79 122 -140 1867 157 7 7 chr5 195005944 195006238 -4623912 + AluJb SINE Alu 1 294 -18 235 311 50 67 chr5 195006246 195006365 -4623785 - L2 LINE L2 -1 3271 3155 2262 102 3 7 chr5 195007824 195008118 -4622032 - AluY SINE Alu -18 293 1 830 154 0 23 chr5 195008124 195008254 -4621896 - FLAM_C SINE Alu -6 127 1 231 277 108 0 chr5 195008369 195008452 -4621698 + MIR SINE MIR 100 191 -71 2210 109 3 13 chr5 195008476 195008779 -4621371 + AluSx SINE Alu 1 300 -12 343 296 72 26 chr5 195008908 195009060 -4621090 - L1ME4a LINE L1 -188 5933 5775 330 272 26 18 chr5 195009064 195009178 -4620972 - L1ME4a LINE L1 -45 6076 5962 555 225 120 96 chr5 195009297 195009475 -4620675 - L1ME4a LINE L1 -12 6109 5937 1776 87 0 0 chr5 195009475 195009740 -4620410 - AluSg/x SINE Alu 0 330 66 555 225 120 96 chr5 195009740 195009782 -4620368 - L1ME4a LINE L1 -184 5937 5897 1861 145 13 28 chr5 195009782 195009964 -4620186 - AluSq SINE Alu 0 313 137 1917 139 10 16 chr5 195009964 195010267 -4619883 - AluSq SINE Alu -12 301 1 1861 145 13 28 chr5 195010267 195010402 -4619748 - AluSq SINE Alu -176 137 1 555 225 120 96 chr5 195010402 195010636 -4619514 - L1ME4a LINE L1 -224 5897 5642 2323 100 23 0 chr5 195010809 195011109 -4619041 + AluSp SINE Alu 1 307 -6 406 270 25 93 chr5 195011127 195011236 -4618914 - L1ME4a LINE L1 -124 5997 5907 2054 144 6 6 chr5 195011236 195011549 -4618601 - AluSq SINE Alu 0 313 1 406 270 25 93 chr5 195011549 195011643 -4618507 - L1ME4a LINE L1 -214 5907 5808 568 229 166 6 chr5 195012115 195012290 -4617860 + MIR SINE MIR 4 206 -56 2180 96 0 7 chr5 195012304 195012584 -4617566 - AluSc SINE Alu -17 292 15 349 253 222 40 chr5 195013501 195013626 -4616524 - MER102a DNA MER1_type -1088 329 228 2581 77 0 3 chr5 195013626 195013938 -4616212 - AluY SINE Alu 0 311 1 349 253 222 40 chr5 195013938 195013994 -4616156 - MER102a DNA MER1_type -1189 228 184 2382 95 0 3 chr5 195013994 195014300 -4615850 - AluSc SINE Alu -4 305 1 349 253 222 40 chr5 195014300 195014342 -4615808 - MER102a DNA MER1_type -1233 184 64 1630 183 14 7 chr5 195014346 195014636 -4615514 + AluJb SINE Alu 1 292 -20 1912 126 7 48 chr5 195014636 195014946 -4615204 - AluSx SINE Alu -15 297 1 470 179 0 32 chr5 195015219 195015314 -4614836 + Tigger5 DNA MER2_type 1 92 -2231 265 150 0 0 chr5 195015346 195015386 -4614764 + Tigger5 DNA MER2_type 2284 2323 0 662 203 0 58 chr5 195015474 195015499 -4614651 - FLAM_C SINE Alu -172 130 105 2277 112 0 10 chr5 195015499 195015802 -4614348 + AluSc SINE Alu 2 301 -8 662 203 0 58 chr5 195015802 195015914 -4614236 - FLAM_C SINE Alu -197 105 1 484 222 0 10 chr5 195016271 195016370 -4613780 - Tigger7 DNA MER2_type -3 2484 2387 * 1066 198 35 74 chr5 195016369 195016539 -4613611 - Tigger7 DNA MER2_type -470 263 88 1842 162 14 0 chr5 195016539 195016829 -4613321 - AluJb SINE Alu -14 298 5 182 62 31 0 chr5 195016837 195016869 -4613281 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2178 97 7 7 chr5 195016871 195017161 -4612989 - AluSq SINE Alu -23 290 1 1066 198 35 74 chr5 195017161 195017236 -4612914 - Tigger7 DNA MER2_type -653 80 16 2293 120 0 3 chr5 195017497 195017797 -4612353 - AluSx SINE Alu -13 299 1 2003 106 58 24 chr5 195018121 195018256 -4611894 + AluSx SINE Alu 1 130 -182 2310 105 0 0 chr5 195018256 195018560 -4611590 + AluSx SINE Alu 1 304 -8 2003 106 58 24 chr5 195018560 195018717 -4611433 + AluSx SINE Alu 130 303 -9 5472 52 9 3 chr5 195018720 195019394 -4610756 + L1PA5 LINE L1 5477 6154 0 1970 112 65 4 chr5 195019493 195019769 -4610381 + AluSq SINE Alu 1 293 -20 2277 84 3 7 chr5 195019924 195020233 -4609917 + AluSq SINE Alu 1 308 0 252 305 127 8 chr5 195020276 195020394 -4609756 - MIR SINE MIR -58 204 73 2159 112 7 3 chr5 195020989 195021285 -4608865 - AluSq SINE Alu -16 297 1 2314 72 14 0 chr5 195021357 195021661 -4608489 + AluSp SINE Alu 1 308 0 252 305 127 8 chr5 195021704 195021822 -4608328 - MIR SINE MIR -58 204 73 965 100 23 0 chr5 195022069 195022199 -4607951 - AluSq/x SINE Alu -179 133 1 655 239 39 65 chr5 195022287 195022517 -4607633 - MIR SINE MIR -8 254 31 533 281 72 39 chr5 195022911 195023064 -4607086 - L2 LINE L2 0 3272 3115 298 122 14 127 chr5 195023304 195023410 -4606740 + AluJb SINE Alu 87 145 -157 2091 100 57 0 chr5 195023410 195023691 -4606459 + AluSg SINE Alu 1 297 -13 2129 104 13 13 chr5 195023695 195023993 -4606157 + AluSq SINE Alu 1 298 -15 2343 72 10 7 chr5 195023999 195024291 -4605859 + AluY SINE Alu 1 293 -18 2247 112 0 0 chr5 195024334 195024630 -4605520 + AluSc SINE Alu 1 296 -13 354 257 64 9 chr5 195025746 195025855 -4604295 - L2 LINE L2 -80 3233 3119 318 295 215 15 chr5 195025895 195026095 -4604055 - MIR SINE MIR -3 259 20 1054 105 0 0 chr5 195026236 195026369 -4603781 - AluSq/x SINE Alu -180 133 1 273 231 46 0 chr5 195026374 195026439 -4603711 - MIR SINE MIR -87 175 108 204 181 0 60 chr5 195026803 195026855 -4603295 + MIR SINE MIR 65 110 -152 1140 157 23 65 chr5 195026864 195027081 -4603069 + AluJo SINE Alu 85 292 -20 328 291 64 28 chr5 195027179 195027320 -4602830 - MIR3 SINE MIR -55 153 8 396 345 57 2 chr5 195027369 195027567 -4602583 + MIR SINE MIR 38 248 -14 363 113 0 0 chr5 195029017 195029079 -4601071 + (TG)n Simple_repeat Simple_repeat 1 62 0 286 298 114 23 chr5 195029378 195029509 -4600641 - L2 LINE L2 -559 2755 2613 958 216 18 0 chr5 195029753 195029924 -4600226 + FAM SINE Alu 1 174 -1 2097 121 0 16 chr5 195029943 195030249 -4599901 + AluSx SINE Alu 1 301 -11 843 189 33 0 chr5 195030264 195030417 -4599733 + FRAM SINE Alu 1 158 -8 907 143 8 0 chr5 195030985 195031118 -4599032 + AluSq/x SINE Alu 1 134 -178 303 354 20 0 chr5 195031138 195031237 -4598913 - MIR SINE MIR -73 135 35 1332 250 120 18 chr5 195031468 195031976 -4598174 - MLT1K LTR MaLR -27 561 2 1037 243 82 50 chr5 195032021 195032337 -4597813 - L1ME2 LINE L1 -10 6154 5823 2276 92 17 3 chr5 195032337 195032631 -4597519 + AluSx SINE Alu 1 298 -14 1037 243 82 50 chr5 195032631 195032692 -4597458 - L1ME2 LINE L1 -341 5823 5765 1906 132 24 3 chr5 195032695 195032984 -4597166 - AluJb SINE Alu -12 300 6 1005 115 0 7 chr5 195032985 195033124 -4597026 - AluJo SINE Alu -174 138 1 1201 218 74 0 chr5 195033130 195033414 -4596736 - L1ME2 LINE L1 -402 5760 5456 381 291 306 5 chr5 195033626 195033822 -4596328 + MIR SINE MIR 2 256 -6 278 276 26 0 chr5 195034248 195034324 -4595826 + MIR SINE MIR 20 97 -111 812 139 31 0 chr5 195034417 195034546 -4595604 + FLAM_A SINE Alu 1 133 0 2561 68 3 0 chr5 195034568 195034876 -4595274 + AluY SINE Alu 2 310 -1 282 290 37 9 chr5 195035553 195035660 -4594490 + MLT1K LTR MaLR 69 178 -410 610 172 263 5 chr5 195035683 195035730 -4594420 + MLT1K LTR MaLR 354 388 -200 1945 106 4 4 chr5 195035730 195035984 -4594166 + AluSx SINE Alu 1 254 -58 610 172 263 5 chr5 195035984 195036122 -4594028 + MLT1K LTR MaLR 388 587 -1 358 301 92 80 chr5 195036158 195036397 -4593753 + L2 LINE L2 3031 3272 0 2066 149 0 0 chr5 195036466 195036767 -4593383 - AluJb SINE Alu -11 301 1 594 226 114 94 chr5 195036885 195037359 -4592791 + MLT1H LTR MaLR 10 545 -4 596 213 9 0 chr5 195037679 195037787 -4592363 + FLAM_A SINE Alu 15 123 -19 269 243 0 14 chr5 195037788 195037862 -4592288 + MLT1K LTR MaLR 501 573 -15 2222 66 7 23 chr5 195037949 195038253 -4591897 + AluY SINE Alu 1 299 -12 216 337 41 0 chr5 195038826 195038924 -4591226 - MIR SINE MIR -53 209 108 501 270 69 29 chr5 195038963 195039137 -4591013 + L2 LINE L2 3133 3313 0 202 295 67 76 chr5 195039122 195039227 -4590923 - MIR SINE MIR -89 119 16 * 468 120 0 102 chr5 195039527 195039635 -4590515 - L1PA11 LINE L1 -2 6172 6076 2083 121 20 3 chr5 195040198 195040495 -4589655 + AluSq SINE Alu 1 302 -11 381 291 306 5 chr5 195040876 195041072 -4589078 + MIR SINE MIR 2 256 -6 278 276 26 0 chr5 195041498 195041574 -4588576 + MIR SINE MIR 20 97 -111 812 139 31 0 chr5 195041667 195041796 -4588354 + FLAM_A SINE Alu 1 133 0 2631 59 3 0 chr5 195041818 195042125 -4588025 + AluY SINE Alu 2 309 -2 282 290 37 9 chr5 195042802 195042909 -4587241 + MLT1K LTR MaLR 69 178 -410 610 172 263 5 chr5 195042932 195042979 -4587171 + MLT1K LTR MaLR 354 388 -200 1980 107 4 0 chr5 195042979 195043232 -4586918 + AluSx SINE Alu 1 254 -58 610 172 263 5 chr5 195043232 195043370 -4586780 + MLT1K LTR MaLR 388 587 -1 358 301 92 80 chr5 195043406 195043645 -4586505 + L2 LINE L2 3031 3272 0 2066 149 0 0 chr5 195043714 195044015 -4586135 - AluJb SINE Alu -11 301 1 594 226 114 94 chr5 195044133 195044607 -4585543 + MLT1H LTR MaLR 10 545 -4 596 213 9 0 chr5 195044928 195045036 -4585114 + FLAM_A SINE Alu 15 123 -19 269 243 0 14 chr5 195045037 195045111 -4585039 + MLT1K LTR MaLR 501 573 -15 2390 63 3 38 chr5 195045198 195045517 -4584633 + AluY SINE Alu 1 308 -3 2112 121 0 16 chr5 195045531 195045838 -4584312 + AluSg SINE Alu 1 302 -8 233 224 24 82 chr5 195045843 195045928 -4584222 + MLT1F1 LTR MaLR 28 107 -460 1659 163 21 14 chr5 195045946 195046096 -4584054 - AluJo SINE Alu -28 284 130 2315 113 0 0 chr5 195046096 195046396 -4583754 - AluSq SINE Alu -10 303 4 1659 163 21 14 chr5 195046396 195046527 -4583623 - AluJo SINE Alu -182 130 1 753 266 20 5 chr5 195046527 195046726 -4583424 + MLT1F1 LTR MaLR 97 298 -269 2987 103 46 29 chr5 195046726 195047171 -4582979 + MER31A LTR ERV1 1 456 -29 2366 95 13 0 chr5 195047171 195047477 -4582673 + AluSx SINE Alu 1 310 -2 2987 103 46 29 chr5 195047477 195047508 -4582642 + MER31A LTR ERV1 456 485 0 293 206 0 0 chr5 195047521 195047589 -4582561 + MLT1F1 LTR MaLR 500 567 0 254 263 12 12 chr5 195047784 195047864 -4582286 - MLT1K LTR MaLR -58 530 451 695 334 40 10 chr5 195047920 195048222 -4581928 - MLT1K LTR MaLR -244 344 34 2288 81 0 7 chr5 195048277 195048584 -4581566 + AluSx SINE Alu 1 305 0 576 240 8 0 chr5 195048920 195049041 -4581109 + FLAM_A SINE Alu 6 127 -15 2062 119 29 23 chr5 195049044 195049354 -4580796 + AluSx SINE Alu 1 312 0 2158 100 28 3 chr5 195049403 195049692 -4580458 + AluSx SINE Alu 1 296 -16 336 211 55 64 chr5 195049763 195049872 -4580278 + MLT1J LTR MaLR 94 201 -310 465 210 216 44 chr5 195050793 195050954 -4579196 - MIR SINE MIR -30 232 35 1990 130 18 3 chr5 195050954 195051239 -4578911 + AluSx SINE Alu 3 291 -21 465 210 216 44 chr5 195051239 195051258 -4578892 - MIR SINE MIR -227 35 21 901 120 0 30 chr5 195051383 195051516 -4578634 + FLAM_C SINE Alu 1 129 -4 240 185 0 11 chr5 195051628 195051722 -4578428 + GA-rich Low_complexity Low_complexity 1 92 0 2291 112 0 10 chr5 195051739 195052052 -4578098 + AluSq SINE Alu 1 310 -3 1951 135 7 23 chr5 195052075 195052379 -4577771 + AluSx SINE Alu 5 303 -9 464 352 56 5 chr5 195052859 195053055 -4577095 + MIR SINE MIR 39 244 -18 2244 97 3 28 chr5 195053124 195053443 -4576707 + AluSx SINE Alu 1 311 -1 243 0 0 0 chr5 195053542 195053569 -4576581 + (GA)n Simple_repeat Simple_repeat 1 27 0 198 0 0 0 chr5 195053568 195053590 -4576560 + (TG)n Simple_repeat Simple_repeat 2 23 0 * 2168 125 3 3 chr5 195053599 195053895 -4576255 - AluSx SINE Alu -16 296 1 357 295 0 70 chr5 195054027 195054093 -4576057 + L2 LINE L2 3169 3238 -75 2056 168 0 0 chr5 195054093 195054396 -4575754 + AluSx SINE Alu 1 303 -9 357 295 0 70 chr5 195054396 195054485 -4575665 + L2 LINE L2 3238 3313 0 26 30 0 0 chr5 195054974 195055007 -4575143 + AT_rich Low_complexity Low_complexity 1 33 0 1092 143 14 84 chr5 195055135 195055403 -4574747 + AluSx SINE Alu 38 286 -26 204 0 0 36 chr5 195055403 195055431 -4574719 + (CAAA)n Simple_repeat Simple_repeat 2 180 0 1092 143 14 84 chr5 195055431 195055448 -4574702 + AluSx SINE Alu 286 303 -9 207 227 61 15 chr5 195055990 195056056 -4574094 - MIR SINE MIR -9 253 185 343 295 110 29 chr5 195056111 195056284 -4573866 - MIR SINE MIR -44 218 32 403 298 99 11 chr5 195057203 195057384 -4572766 - MIR SINE MIR -6 256 60 360 151 18 0 chr5 195057654 195057723 -4572427 + AluSx SINE Alu 1 53 -247 8115 37 2 2 chr5 195057723 195058620 -4571530 + MER11D LTR ERVK 1 897 0 1801 134 0 0 chr5 195058621 195058883 -4571267 + AluSx SINE Alu 50 311 -1 1989 158 0 0 chr5 195058897 195059194 -4570956 + AluSx SINE Alu 3 299 -13 1177 58 0 26 chr5 195059687 195059843 -4570307 - L1PA5 LINE L1 -3 6151 6000 2446 71 7 0 chr5 195059879 195060176 -4569974 + AluY SINE Alu 1 299 -12 211 337 41 0 chr5 195060749 195060847 -4569303 - MIR SINE MIR -53 209 108 502 322 33 0 chr5 195060908 195061060 -4569090 + L2 LINE L2 3116 3272 0 204 295 67 76 chr5 195061045 195061150 -4569000 - MIR SINE MIR -89 119 16 * 513 120 0 102 chr5 195061451 195061559 -4568591 - L1PA11 LINE L1 -2 6172 6076 2184 109 16 3 chr5 195062121 195062424 -4567726 + AluSx SINE Alu 1 307 -5 1739 203 51 66 chr5 195063257 195063725 -4566425 - L1ME1 LINE L1 -5 6161 5705 1051 225 9 28 chr5 195063961 195064179 -4565971 + MER58A DNA MER1_type 1 214 -10 901 204 12 12 chr5 195064179 195064341 -4565809 + FRAM SINE Alu 1 162 -4 1834 160 53 32 chr5 195064449 195064787 -4565363 + MLT1A1 LTR MaLR 10 354 -11 501 17 0 0 chr5 195065019 195065077 -4565073 + (CA)n Simple_repeat Simple_repeat 2 59 0 26 50 0 0 chr5 195065469 195065509 -4564641 + AT_rich Low_complexity Low_complexity 1 40 0 1615 155 31 69 chr5 195065999 195066316 -4563834 + AluJo SINE Alu 1 305 -7 704 221 24 0 chr5 195066997 195067124 -4563026 + FRAM SINE Alu 2 131 -45 33 43 0 0 chr5 195067124 195067171 -4562979 + AT_rich Low_complexity Low_complexity 1 47 0 397 259 27 18 chr5 195069353 195069465 -4560685 + L3 LINE CR1 1464 1576 -1 433 273 110 11 chr5 195069838 195070035 -4560115 + MIR SINE MIR 8 222 -40 2814 13 0 0 chr5 195070980 195071283 -4558867 + AluYa5 SINE Alu 1 303 -8 2289 92 3 3 chr5 195071295 195071590 -4558560 + AluSp SINE Alu 1 295 -18 569 268 116 18 chr5 195071590 195071814 -4558336 - MIR SINE MIR -15 247 2 2130 133 0 0 chr5 195072183 195072484 -4557666 + AluSx SINE Alu 1 301 -11 491 241 73 33 chr5 195073258 195073582 -4556568 + L1ME4a LINE L1 5494 5867 -254 2287 81 3 7 chr5 195074084 195074380 -4555770 + AluY SINE Alu 1 295 -16 738 210 14 21 chr5 195074421 195074564 -4555586 - FLAM_C SINE Alu 0 143 2 454 316 100 5 chr5 195075150 195075362 -4554788 - MIR SINE MIR -6 256 21 1240 269 47 15 chr5 195075774 195076177 -4553973 + L1MC5 LINE L1 5267 5689 -468 350 217 177 34 chr5 195076240 195076415 -4553735 + L1MC5 LINE L1 5812 6011 -1797 22 25 0 25 chr5 195076547 195076565 -4553585 + AT_rich Low_complexity Low_complexity 1 18 -21 1580 203 3 3 chr5 195076565 195076865 -4553285 + AluJb SINE Alu 1 300 -12 22 25 0 25 chr5 195076865 195076886 -4553264 + AT_rich Low_complexity Low_complexity 18 39 0 2246 102 0 3 chr5 195077035 195077329 -4552821 + AluSg SINE Alu 1 293 -17 354 149 0 14 chr5 195077332 195077406 -4552744 + L1ME4a LINE L1 6040 6112 -9 2348 101 0 3 chr5 195078932 195079239 -4550911 + AluSx SINE Alu 1 306 -6 183 336 157 8 chr5 195079878 195080012 -4550138 - MIR3 SINE MIR -7 201 48 522 242 33 8 chr5 195080016 195080136 -4550014 + L2 LINE L2 3190 3312 -1 1164 191 42 146 chr5 195080232 195080570 -4549580 + L1MC5 LINE L1 6660 6925 -1036 2086 139 0 0 chr5 195080570 195080873 -4549277 + AluSq SINE Alu 1 303 -10 1164 191 42 146 chr5 195080873 195081062 -4549088 + L1MC5 LINE L1 6925 7132 -829 2383 71 3 7 chr5 195081062 195081359 -4548791 + AluY SINE Alu 1 296 -15 2313 89 0 13 chr5 195081397 195081701 -4548449 + AluSx SINE Alu 1 300 -12 262 294 65 0 chr5 195081702 195081855 -4548295 + L1MB7 LINE L1 3222 3384 -2762 2324 97 0 0 chr5 195081855 195082155 -4547995 - AluSx SINE Alu -12 300 1 640 217 35 62 chr5 195082173 195082399 -4547751 + MER106A DNA MER1_type 1 220 -16 929 199 42 119 chr5 195082402 195082559 -4547591 + AluJb SINE Alu 1 124 -188 1593 201 42 0 chr5 195082559 195082848 -4547302 + AluJb SINE Alu 1 301 -11 929 199 42 119 chr5 195082848 195083002 -4547148 + AluJb SINE Alu 124 288 -24 1248 256 130 11 chr5 195083029 195083497 -4546653 + L1MB7 LINE L1 4645 5168 -978 1342 146 131 22 chr5 195083501 195083768 -4546382 + AluSg1 SINE Alu 1 296 -13 1329 167 71 28 chr5 195083821 195084103 -4546047 + AluJo SINE Alu 11 304 -8 342 241 98 35 chr5 195084107 195084272 -4545878 + L1MCa LINE L1 16 171 -6252 1187 164 48 61 chr5 195084882 195084952 -4545198 + L1MB7 LINE L1 5261 5330 -838 1276 157 59 111 chr5 195084952 195085276 -4544874 + AluJo SINE Alu 1 307 -5 1187 164 48 61 chr5 195085276 195085536 -4544614 + L1MB7 LINE L1 5330 5575 -593 * 1220 155 50 25 chr5 195085535 195085774 -4544376 + L1MB7 LINE L1 5814 6058 -126 2306 96 0 3 chr5 195085877 195086178 -4543972 + AluSx SINE Alu 1 300 -12 801 218 133 8 chr5 195086183 195086431 -4543719 + L1M4 LINE L1 2507 2785 -3361 630 94 0 75 chr5 195086443 195086549 -4543601 + AluSg/x SINE Alu 213 310 0 2161 129 0 3 chr5 195086564 195086874 -4543276 + AluSx SINE Alu 1 309 -3 2315 57 0 7 chr5 195087026 195087337 -4542813 + AluY SINE Alu 1 309 0 469 309 149 18 chr5 195087464 195087962 -4542188 + L1M4 LINE L1 3652 4214 -1932 2171 81 56 3 chr5 195088273 195088557 -4541593 + AluSx SINE Alu 1 299 -13 1934 241 22 23 chr5 195088737 195089212 -4540938 + MLT2B2 LTR ERVL 1 416 -37 480 165 0 0 chr5 195089212 195089303 -4540847 + (TCCA)n Simple_repeat Simple_repeat 2 92 0 24 32 0 0 chr5 195089634 195089665 -4540485 + AT_rich Low_complexity Low_complexity 1 31 0 1598 137 0 51 chr5 195089712 195089968 -4540182 - AluJo SINE Alu -59 253 11 2313 105 0 6 chr5 195090068 195090381 -4539769 - AluY SINE Alu 0 311 1 1386 188 57 11 chr5 195090456 195090738 -4539412 + AluJo SINE Alu 1 295 -17 677 225 101 0 chr5 195090886 195091055 -4539095 + MER3 DNA MER1_type 12 197 -12 2043 126 11 0 chr5 195091650 195091936 -4538214 - AluSx SINE Alu -23 289 1 1038 89 7 0 chr5 195091936 195092071 -4538079 - AluSq/x SINE Alu -176 136 1 6438 68 16 283 chr5 195092162 195094039 -4536111 + SVA Other Other 11 1384 -2 2260 114 0 0 chr5 195094106 195094405 -4535745 + AluSq SINE Alu 1 299 -14 1105 193 5 37 chr5 195094540 195094758 -4535392 - AluJo SINE Alu -15 297 87 426 246 0 66 chr5 195094780 195094902 -4535248 + L1MB5 LINE L1 3987 4100 -2046 1327 157 50 103 chr5 195094902 195095049 -4535101 + AluJo SINE Alu 1 123 -189 1960 128 0 0 chr5 195095049 195095322 -4534828 + AluSx SINE Alu 40 312 0 1327 157 50 103 chr5 195095322 195095493 -4534657 + AluJo SINE Alu 123 302 -10 1033 174 26 5 chr5 195095493 195095683 -4534467 + AluJo SINE Alu 1 194 -118 558 232 95 70 chr5 195095699 195095873 -4534277 + L1MB5 LINE L1 4077 4262 -1884 2298 104 0 3 chr5 195095873 195096172 -4533978 + AluSq SINE Alu 1 298 -15 558 232 95 70 chr5 195096172 195096282 -4533868 + L1MB5 LINE L1 4262 4368 -1778 1875 159 7 23 chr5 195096299 195096608 -4533542 + AluSx SINE Alu 1 304 -8 1044 148 6 6 chr5 195096609 195096771 -4533379 + AluJb SINE Alu 133 294 -18 1430 163 25 28 chr5 195096805 195097087 -4533063 + AluJb SINE Alu 23 303 -9 919 155 10 57 chr5 195097087 195097280 -4532870 + L1MB5 LINE L1 5394 5577 -606 1947 149 27 54 chr5 195097280 195097615 -4532535 + L1MB5 LINE L1 5815 6142 -32 2395 90 3 0 chr5 195097615 195097916 -4532234 - AluSc SINE Alu -7 302 1 1947 149 27 54 chr5 195097916 195097949 -4532201 + L1MB5 LINE L1 6142 6174 0 1932 153 10 0 chr5 195098314 195098608 -4531542 + AluSx SINE Alu 1 297 -15 1672 189 56 39 chr5 195098753 195098835 -4531315 + MLT1A1 LTR MaLR 3 82 -283 2533 64 0 3 chr5 195098835 195099147 -4531003 + AluY SINE Alu 1 311 0 1672 189 56 39 chr5 195099147 195099419 -4530731 + MLT1A1 LTR MaLR 82 363 -2 26 0 0 0 chr5 195099479 195099505 -4530645 + AT_rich Low_complexity Low_complexity 1 26 0 1532 205 11 7 chr5 195099615 195099898 -4530252 - AluJo SINE Alu -18 294 11 2336 93 0 10 chr5 195099935 195100246 -4529904 - AluY SINE Alu -3 308 1 500 75 6 6 chr5 195100430 195100586 -4529564 + AluSp SINE Alu 59 303 -10 2359 79 0 0 chr5 195100586 195100878 -4529272 + AluY SINE Alu 1 292 -19 1103 172 0 16 chr5 195100879 195101065 -4529085 + AluJb SINE Alu 107 289 -23 22 0 0 0 chr5 195101205 195101227 -4528923 + AT_rich Low_complexity Low_complexity 1 22 0 779 179 0 30 chr5 195101278 195101412 -4528738 + FLAM_C SINE Alu 1 130 -3 340 138 0 15 chr5 195101458 195101523 -4528627 + L1ME LINE L1 5129 5192 -954 1073 211 0 40 chr5 195101535 195101758 -4528392 + AluJo SINE Alu 86 299 -13 398 184 0 0 chr5 195101762 195101838 -4528312 + L1ME LINE L1 5207 5282 -864 2097 126 17 0 chr5 195101839 195102133 -4528017 + AluSx SINE Alu 1 299 -13 328 122 20 0 chr5 195102138 195102187 -4527963 + Alu SINE Alu 1 50 -252 1468 174 0 13 chr5 195102187 195102422 -4527728 - AluJb SINE Alu -78 234 3 520 114 0 0 chr5 195102457 195102527 -4527623 + L1PA7 LINE L1 6066 6135 -19 2316 109 0 0 chr5 195102662 195102966 -4527184 + AluSq SINE Alu 2 305 -8 263 183 0 17 chr5 195103101 195103161 -4526989 + Alu SINE Alu 243 301 -1 1139 214 39 18 chr5 195103161 195103496 -4526654 + L1ME LINE L1 5301 5632 -546 2501 133 109 79 chr5 195103496 195104054 -4526096 - LTR4 LTR ERV1 0 596 22 578 193 62 0 chr5 195104058 195104203 -4525947 + L1ME LINE L1 5624 5777 -389 1810 159 57 17 chr5 195104203 195104499 -4525651 + AluSx SINE Alu 1 308 -4 2207 116 0 3 chr5 195104499 195104802 -4525348 + AluY SINE Alu 1 302 -9 2214 199 83 24 chr5 195104802 195105334 -4524816 + L1ME1 LINE L1 5541 6103 -63 299 256 38 62 chr5 195105461 195105621 -4524529 + L1M4b LINE L1 92 247 -6612 401 347 85 44 chr5 195106040 195106341 -4523809 + L2 LINE L2 2426 2713 -559 2310 70 3 3 chr5 195106341 195106643 -4523507 + AluY SINE Alu 1 302 -9 401 347 85 44 chr5 195106643 195106935 -4523215 + L2 LINE L2 2713 3076 -196 209 315 185 9 chr5 195107031 195107139 -4523011 + L2 LINE L2 3134 3260 -12 1871 117 46 11 chr5 195107140 195107423 -4522727 + AluSx SINE Alu 9 301 -11 2132 93 4 0 chr5 195107425 195107734 -4522416 + AluSp SINE Alu 3 312 0 1425 176 71 24 chr5 195107949 195108244 -4521906 + AluJo SINE Alu 1 309 -3 6679 111 25 17 chr5 195108316 195108993 -4521157 - L1MA2 LINE L1 -1 6303 5633 2155 83 17 3 chr5 195108993 195109294 -4520856 - AluY SINE Alu -5 306 2 6679 111 25 17 chr5 195109294 195109538 -4520612 - L1MA2 LINE L1 -671 5633 5393 2314 92 3 0 chr5 195109538 195109841 -4520309 - AluSp SINE Alu -9 304 1 6679 111 25 17 chr5 195109841 195110372 -4519778 - L1MA2 LINE L1 -911 5393 4832 419 231 56 0 chr5 195110416 195110524 -4519626 + L1M4 LINE L1 4470 4583 -1563 424 248 16 0 chr5 195110563 195110692 -4519458 + L1M4 LINE L1 4573 4703 -1443 2198 82 0 38 chr5 195110698 195111016 -4519134 + AluY SINE Alu 1 306 -5 1368 132 33 129 chr5 195111019 195111352 -4518798 + AluJo SINE Alu 2 302 0 694 202 175 0 chr5 195111358 195111541 -4518609 + L1ME3 LINE L1 5946 6160 -2 2118 79 18 0 chr5 195111562 195111861 -4518289 + AluY SINE Alu 1 304 0 200 310 14 14 chr5 195112013 195112084 -4518066 + L2 LINE L2 3242 3312 -1 205 152 0 0 chr5 195112236 195112269 -4517881 + (CA)n Simple_repeat Simple_repeat 1 33 0 2189 85 0 0 chr5 195112415 195112724 -4517426 + AluSg SINE Alu 1 309 0 1425 174 32 4 chr5 195112895 195113148 -4517002 - AluJb SINE Alu -29 283 24 817 137 78 26 chr5 195113951 195114104 -4516046 - AluJb SINE Alu -18 294 134 1747 139 3 26 chr5 195114104 195114414 -4515736 - AluJo SINE Alu -6 306 4 218 250 40 13 chr5 195114597 195114673 -4515477 - MIR SINE MIR -82 180 103 227 306 16 0 chr5 195114831 195114893 -4515257 + MIR SINE MIR 12 74 -188 245 319 85 37 chr5 195115980 195116102 -4514048 + L1ME3 LINE L1 5527 5642 -520 2218 90 3 3 chr5 195116102 195116413 -4513737 + AluSx SINE Alu 2 312 0 245 319 85 37 chr5 195116413 195116691 -4513459 + L1ME3 LINE L1 5642 5946 -216 2245 117 0 0 chr5 195116866 195117174 -4512976 + AluSx SINE Alu 1 308 -4 219 360 99 41 chr5 195117269 195117563 -4512587 + L2 LINE L2 2958 3268 -4 673 266 75 39 chr5 195117693 195117966 -4512184 + MLT1F1 LTR MaLR 1 277 -290 529 232 99 33 chr5 195117954 195118049 -4512101 + MLT1F1 LTR MaLR 402 512 -55 * 1747 158 20 13 chr5 195118049 195118352 -4511798 - AluJo SINE Alu -7 305 1 529 232 99 33 chr5 195118352 195118407 -4511743 + MLT1F1 LTR MaLR 512 562 -5 380 281 8 16 chr5 195118474 195118595 -4511555 + MLT1L LTR MaLR 496 615 0 696 134 0 0 chr5 195118697 195118794 -4511356 + AluJo SINE Alu 35 131 -181 1598 87 0 5 chr5 195118796 195119004 -4511146 + AluSx SINE Alu 1 207 -105 287 81 0 0 chr5 195119004 195119041 -4511109 + AluSx SINE Alu 250 286 -14 30 0 0 0 chr5 195119041 195119071 -4511079 + AT_rich Low_complexity Low_complexity 1 30 0 1113 142 0 16 chr5 195119093 195119276 -4510874 + AluJo SINE Alu 120 299 -13 315 259 62 0 chr5 195119346 195119427 -4510723 + L2 LINE L2 3195 3280 -33 1676 95 74 8 chr5 195119590 195119833 -4510317 - AluSx SINE Alu -19 293 35 1443 139 12 67 chr5 195119955 195120285 -4509865 + AluJb SINE Alu 1 312 0 781 198 0 8 chr5 195120321 195120447 -4509703 + FAM SINE Alu 1 125 -60 1251 170 0 5 chr5 195120447 195120678 -4509472 + AluJo SINE Alu 85 314 0 485 196 0 0 chr5 195120678 195120775 -4509375 + L1M4 LINE L1 5034 5130 -1016 614 26 0 0 chr5 195120789 195120865 -4509285 + MER11A LTR ERVK 1 76 -1190 2336 78 0 0 chr5 195120867 195121163 -4508987 - AluY SINE Alu -15 296 1 264 30 0 0 chr5 195121365 195121398 -4508752 + (CA)n Simple_repeat Simple_repeat 2 34 0 180 0 0 0 chr5 195121397 195121417 -4508733 + (TA)n Simple_repeat Simple_repeat 2 21 0 * 2160 95 3 7 chr5 195121417 195121712 -4508438 - AluSg1 SINE Alu -15 294 1 897 139 0 0 chr5 195121717 195121846 -4508304 - FLAM_C SINE Alu -14 129 1 855 102 0 51 chr5 195122081 195122218 -4507932 - AluJb SINE Alu -31 281 152 565 237 26 0 chr5 195122471 195122585 -4507565 - FLAM_A SINE Alu -16 117 1 227 323 188 26 chr5 195122675 195122867 -4507283 - MIR SINE MIR -27 235 13 205 290 214 8 chr5 195122900 195123031 -4507119 - L2 LINE L2 -193 3079 2922 322 202 17 50 chr5 195123495 195123614 -4506536 + (CGGGG)n Simple_repeat Simple_repeat 2 116 0 223 310 17 35 chr5 195124173 195124289 -4505861 - MIR SINE MIR -73 135 22 2596 42 0 0 chr5 195124777 195125088 -4505062 - AluY SINE Alu 0 311 1 273 286 51 0 chr5 195126139 195126237 -4503913 + MIR SINE MIR 45 147 -61 195 42 0 0 chr5 195126701 195126725 -4503425 + (TG)n Simple_repeat Simple_repeat 2 25 0 432 82 0 0 chr5 195126842 195126903 -4503247 + (TG)n Simple_repeat Simple_repeat 2 62 0 226 272 188 15 chr5 195127972 195128098 -4502052 + MIR SINE MIR 20 165 -43 247 291 13 0 chr5 195128158 195128237 -4501913 - MIR SINE MIR -130 132 53 1865 158 0 16 chr5 195130531 195130847 -4499303 + AluJo SINE Alu 1 311 -1 292 206 325 0 chr5 195130982 195131108 -4499042 + MIR SINE MIR 86 252 -10 260 284 0 14 chr5 195131886 195131960 -4498190 - MIR SINE MIR -117 145 73 189 345 0 0 chr5 195132659 195132714 -4497436 + MIR SINE MIR 94 148 -60 428 77 15 0 chr5 195133595 195133660 -4496490 + (TCC)n Simple_repeat Simple_repeat 2 67 0 1431 184 7 24 chr5 195133912 195134206 -4495944 + AluJb SINE Alu 23 311 -1 1062 165 29 12 chr5 195134212 195134375 -4495775 + L1M4 LINE L1 5137 5307 -839 1710 119 91 11 chr5 195134375 195134661 -4495489 + AluSx SINE Alu 1 309 -3 1062 165 29 12 chr5 195134661 195134739 -4495411 + L1M4 LINE L1 5307 5382 -764 1131 149 0 26 chr5 195134739 195134918 -4495232 + AluSg/x SINE Alu 122 297 -15 354 85 102 0 chr5 195134918 195134977 -4495173 + L1MB7 LINE L1 6104 6168 -16 1131 149 0 26 chr5 195134977 195134992 -4495158 + AluSg/x SINE Alu 297 311 -1 2144 126 3 3 chr5 195135679 195135988 -4494162 - AluSq SINE Alu -4 309 1 444 199 64 92 chr5 195136003 195136060 -4494090 + Charlie2a DNA MER1_type 1493 1550 -1312 2135 118 0 7 chr5 195136060 195136365 -4493785 - AluSg SINE Alu -7 303 1 444 199 64 92 chr5 195136365 195136448 -4493702 + Charlie2a DNA MER1_type 1550 1629 -1233 2196 113 0 0 chr5 195136455 195136756 -4493394 - AluSx SINE Alu -11 301 1 2311 77 3 0 chr5 195136762 195137059 -4493091 - AluY SINE Alu -13 298 1 772 130 99 0 chr5 195137060 195137191 -4492959 - AluJb SINE Alu -167 145 2 2138 95 0 3 chr5 195137824 195138118 -4492032 - AluSg SINE Alu -17 293 1 1760 156 0 38 chr5 195138134 195138310 -4491840 - AluJb SINE Alu -10 302 121 210 37 0 0 chr5 195138310 195138337 -4491813 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1973 121 4 0 chr5 195138337 195138617 -4491533 - AluSx SINE Alu -31 281 1 1760 156 0 38 chr5 195138617 195138753 -4491397 - AluJb SINE Alu -189 123 1 267 216 165 31 chr5 195139667 195139764 -4490386 + MIR SINE MIR 110 219 -43 184 337 50 10 chr5 195140106 195140207 -4489943 + L2 LINE L2 2952 3056 -216 264 327 10 48 chr5 195140659 195140763 -4489387 + MIR SINE MIR 162 261 -1 237 161 196 0 chr5 195141330 195141386 -4488764 + L2 LINE L2 3201 3267 -5 241 214 0 122 chr5 195141507 195141605 -4488545 - MIR SINE MIR -69 139 54 213 154 0 0 chr5 195143291 195143330 -4486820 + G-rich Low_complexity Low_complexity 3 41 0 216 0 0 0 chr5 195143542 195143566 -4486584 + (TGG)n Simple_repeat Simple_repeat 3 26 0 27 73 0 0 chr5 195143993 195144048 -4486102 + GC_rich Low_complexity Low_complexity 1 55 0 27 87 0 0 chr5 195144187 195144256 -4485894 + GC_rich Low_complexity Low_complexity 1 69 0 23 33 0 0 chr5 195144686 195144716 -4485434 + GC_rich Low_complexity Low_complexity 1 30 0 1079 115 48 0 chr5 195147106 195147271 -4482879 - AluSc SINE Alu -14 295 123 228 67 0 0 chr5 195147298 195147328 -4482822 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 426 183 11 11 chr5 195147351 195147444 -4482706 - FLAM_A SINE Alu -5 137 45 21 0 0 0 chr5 195148142 195148163 -4481987 + AT_rich Low_complexity Low_complexity 1 21 0 1977 106 33 0 chr5 195148303 195148619 -4481531 + AluSq SINE Alu 1 325 0 2079 107 7 0 chr5 195148762 195149053 -4481097 - AluSx SINE Alu -15 297 5 2266 85 3 0 chr5 195149147 195149440 -4480710 - AluSq SINE Alu -19 294 1 1026 60 0 0 chr5 195149556 195149690 -4480460 + (TCC)n Simple_repeat Simple_repeat 2 135 0 1891 130 34 3 chr5 195151743 195152035 -4478115 + AluSx SINE Alu 1 301 -11 610 174 13 25 chr5 195152439 195152674 -4477476 + CT-rich Low_complexity Low_complexity 1 232 0 1514 173 7 18 chr5 195152675 195152952 -4477198 - AluJo SINE Alu -3 309 36 197 214 24 0 chr5 195153243 195153285 -4476865 - MIR SINE MIR -109 153 111 2344 81 10 0 chr5 195153681 195153989 -4476161 + AluY SINE Alu 1 311 0 2114 117 0 0 chr5 195153997 195154296 -4475854 + AluSx SINE Alu 1 299 -13 2253 84 3 0 chr5 195154296 195154595 -4475555 + AluSq SINE Alu 1 300 -13 1616 166 41 57 chr5 195154771 195155029 -4475121 - MER46B DNA MER2_type -2495 236 -25 1683 147 26 29 chr5 195155029 195155170 -4474980 + AluJb SINE Alu 1 141 -171 2204 116 0 0 chr5 195155170 195155480 -4474670 + AluSx SINE Alu 1 310 -2 1082 164 35 48 chr5 195155420 195155635 -4474515 + AluJo SINE Alu 85 298 -14 1683 147 26 29 chr5 195155480 195155635 -4474515 + AluJb SINE Alu 141 298 -14 2153 140 13 0 chr5 195155635 195155942 -4474208 + AluJo SINE Alu 1 311 -1 1683 147 26 29 chr5 195155942 195155957 -4474193 + AluJb SINE Alu 298 312 0 1082 164 35 48 chr5 195155942 195155957 -4474193 + AluJo SINE Alu 298 312 0 1616 166 41 57 chr5 195155957 195156065 -4474085 - MER46B DNA MER2_type -2755 4294967272 1 200 288 96 0 chr5 195156073 195156146 -4474004 + MIR SINE MIR 97 176 -86 354 273 17 21 chr5 195156229 195156392 -4473758 - MIR SINE MIR -62 146 34 2116 107 72 0 chr5 195156875 195157166 -4472984 - AluSp SINE Alu -1 312 1 490 208 156 81 chr5 195157184 195157357 -4472793 - MER5A DNA MER1_type 0 189 4 1199 117 0 0 chr5 195157395 195157549 -4472601 - AluSx SINE Alu -115 197 44 2362 98 0 0 chr5 195157552 195157848 -4472302 - AluSx SINE Alu -16 296 1 307 239 35 106 chr5 195157859 195158001 -4472149 - HAL1 LINE L1 -6 2501 2370 201 250 62 50 chr5 195158064 195158144 -4472006 + L2 LINE L2 3187 3267 -5 2326 92 0 7 chr5 195158998 195159290 -4470860 + AluSc SINE Alu 1 290 -19 2690 45 3 0 chr5 195159290 195159600 -4470550 + AluY SINE Alu 1 311 0 348 309 296 16 chr5 195159821 195160196 -4469954 + L2 LINE L2 2829 3308 -5 2430 77 6 6 chr5 195160737 195161048 -4469102 + AluY SINE Alu 1 311 0 1112 92 0 0 chr5 195161049 195161184 -4468966 + AluSq/x SINE Alu 1 136 -171 2312 104 0 0 chr5 195161184 195161483 -4468667 + AluSg SINE Alu 1 299 -11 446 0 19 0 chr5 195161636 195161690 -4468460 + (CA)n Simple_repeat Simple_repeat 2 56 0 2277 110 7 0 chr5 195161984 195162285 -4467865 + AluSq SINE Alu 1 303 -10 681 328 64 34 chr5 195162361 195162828 -4467322 - L2 LINE L2 -2 3311 2831 1245 178 0 10 chr5 195163166 195163368 -4466782 + AluJo SINE Alu 1 200 -112 339 179 94 60 chr5 195163397 195163570 -4466580 + FRAM SINE Alu 25 201 0 2258 104 10 7 chr5 195163575 195163883 -4466267 + AluSx SINE Alu 1 309 -3 2399 80 3 13 chr5 195163886 195164197 -4465953 + AluSg1 SINE Alu 1 308 -1 196 272 117 10 chr5 195164976 195165079 -4465071 + L2 LINE L2 2930 3043 -229 207 264 0 0 chr5 195165102 195165155 -4464995 - L2 LINE L2 -291 2981 2929 201 299 178 9 chr5 195165707 195165814 -4464336 - MIR SINE MIR -59 149 25 520 328 15 20 chr5 195165838 195166036 -4464114 + MIR SINE MIR 63 259 -3 1067 94 0 7 chr5 195166407 195166556 -4463594 + AluSg/x SINE Alu 152 299 -11 2053 146 0 13 chr5 195166839 195167155 -4462995 - AluSx SINE Alu 0 312 1 2069 117 13 19 chr5 195167699 195168006 -4462144 + AluSx SINE Alu 2 306 -6 2354 109 0 0 chr5 195168017 195168319 -4461831 + AluSx SINE Alu 1 302 -10 2322 65 0 10 chr5 195168319 195168609 -4461541 + AluSg SINE Alu 1 287 -23 1834 142 21 3 chr5 195169930 195170219 -4459931 + AluJb SINE Alu 2 295 -17 686 179 6 39 chr5 195170219 195170403 -4459747 + AluJb SINE Alu 134 312 0 2017 139 3 3 chr5 195170442 195170745 -4459405 + AluJb SINE Alu 2 304 -8 485 239 187 0 chr5 195170747 195170902 -4459248 + MIR SINE MIR 72 255 -7 616 179 170 71 chr5 195171259 195171350 -4458800 - MIR SINE MIR 0 262 181 1918 129 84 3 chr5 195171350 195171637 -4458513 + AluSg SINE Alu 1 310 0 616 179 170 71 chr5 195171637 195171769 -4458381 - MIR SINE MIR -81 181 17 2150 108 10 3 chr5 195171830 195172125 -4458025 + AluSq SINE Alu 1 297 -16 972 109 7 20 chr5 195172127 195172274 -4457876 + AluSq/x SINE Alu 1 145 -167 1787 135 20 34 chr5 195172275 195172571 -4457579 + AluSx SINE Alu 2 293 -19 2204 100 28 3 chr5 195172625 195172916 -4457234 + AluSq SINE Alu 3 300 -13 373 260 256 22 chr5 195172944 195173171 -4456979 + L1MC4 LINE L1 7690 7969 -73 2413 92 0 9 chr5 195173179 195173494 -4456656 - AluSp SINE Alu -1 312 1 2187 133 0 13 chr5 195173513 195173693 -4456457 - AluSx SINE Alu 0 312 136 2049 154 0 0 chr5 195173693 195173999 -4456151 - AluSx SINE Alu -6 306 1 2187 133 0 13 chr5 195173999 195174134 -4456016 - AluSx SINE Alu -176 136 1 316 242 21 32 chr5 195174311 195174406 -4455744 - L1MC4 LINE L1 -1337 6705 6612 * 347 228 40 67 chr5 195174391 195174493 -4455657 - L1MCa LINE L1 -4362 2064 1966 190 0 67 0 chr5 195174493 195174523 -4455627 + (TA)n Simple_repeat Simple_repeat 2 33 0 347 228 40 67 chr5 195174523 195174569 -4455581 - L1MCa LINE L1 -4460 1966 1920 2274 86 10 0 chr5 195174571 195174862 -4455288 - AluSq SINE Alu -18 295 2 857 152 0 8 chr5 195174863 195174995 -4455155 - AluJb SINE Alu -181 131 1 1236 216 30 56 chr5 195175344 195175649 -4454501 + AluJb SINE Alu 1 297 -5 5189 122 46 36 chr5 195175658 195176671 -4453479 + L1MA3 LINE L1 5256 6278 -27 496 169 25 30 chr5 195176671 195176791 -4453359 + L1M4 LINE L1 5559 5689 -473 732 213 85 16 chr5 195176792 195176980 -4453170 - Tigger1 DNA MER2_type -1 2417 2217 978 224 55 117 chr5 195177104 195177243 -4452907 + AluJo SINE Alu 1 147 -155 2323 111 0 3 chr5 195177243 195177549 -4452601 + AluSx SINE Alu 1 305 -7 978 224 55 117 chr5 195177549 195177560 -4452590 + AluJo SINE Alu 147 157 -145 222 37 0 0 chr5 195177560 195177587 -4452563 + (GGGGA)n Simple_repeat Simple_repeat 1 27 0 978 224 55 117 chr5 195177587 195177743 -4452407 + AluJo SINE Alu 157 289 -13 359 136 341 0 chr5 195177744 195177832 -4452318 - Tigger1 DNA MER2_type -217 2201 2084 1313 199 72 25 chr5 195177832 195178013 -4452137 - AluJb SINE Alu -1 311 111 2564 61 0 0 chr5 195178013 195178310 -4451840 - AluY SINE Alu -14 297 1 1313 199 72 25 chr5 195178310 195178405 -4451745 - AluJb SINE Alu -201 111 22 513 122 30 137 chr5 195178427 195178455 -4451695 - Tigger1 DNA MER2_type -331 2087 2058 1911 159 10 3 chr5 195178455 195178764 -4451386 + AluSx SINE Alu 1 311 -1 513 122 30 137 chr5 195178764 195178866 -4451284 - Tigger1 DNA MER2_type -360 2058 1971 546 163 23 70 chr5 195178866 195178995 -4451155 - AluSg/x SINE Alu -5 305 183 1071 102 61 0 chr5 195178995 195179142 -4451008 + AluY SINE Alu 144 299 -12 256 172 0 47 chr5 195179142 195179200 -4450950 - Tigger1 DNA MER2_type -587 1831 1776 2327 91 0 7 chr5 195179200 195179531 -4450619 + AluSg SINE Alu 1 310 0 1513 140 19 103 chr5 195179633 195179775 -4450375 + AluSx SINE Alu 9 111 -201 2344 99 0 34 chr5 195179775 195180098 -4450052 + AluSx SINE Alu 1 312 0 1513 140 19 103 chr5 195180098 195180276 -4449874 + AluSx SINE Alu 111 302 -10 2302 120 3 0 chr5 195180666 195180974 -4449176 + AluSp SINE Alu 1 309 -4 637 178 0 0 chr5 195181467 195181568 -4448582 + AluJb SINE Alu 192 292 -20 2318 81 3 0 chr5 195181655 195181938 -4448212 + AluSp SINE Alu 1 284 -29 198 0 0 0 chr5 195181940 195181962 -4448188 + (CAAT)n Simple_repeat Simple_repeat 2 23 0 1815 167 10 10 chr5 195181986 195182285 -4447865 + AluSx SINE Alu 1 299 -13 607 130 0 56 chr5 195182514 195182622 -4447528 - AluJb SINE Alu -19 293 192 195 69 0 0 chr5 195182639 195182668 -4447482 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2089 112 18 0 chr5 195182671 195182948 -4447202 - AluSx SINE Alu -30 282 1 355 316 53 0 chr5 195182950 195183045 -4447105 + L2 LINE L2 3118 3217 -55 257 161 71 0 chr5 195183053 195183109 -4447041 + Alu SINE Alu 238 297 -5 947 233 12 121 chr5 195183584 195183923 -4446227 + AluSq SINE Alu 1 302 -1 2279 117 0 0 chr5 195184005 195184304 -4445846 + AluSx SINE Alu 1 299 -13 1388 223 7 14 chr5 195184540 195184836 -4445314 - AluJb SINE Alu -18 294 1 2568 60 7 0 chr5 195185010 195185310 -4444840 + AluY SINE Alu 1 302 -9 2307 91 3 13 chr5 195185319 195185617 -4444533 + AluSq SINE Alu 1 295 -18 1158 113 0 18 chr5 195185666 195185834 -4444316 + AluSx SINE Alu 1 165 -147 2077 57 42 8 chr5 195185835 195186097 -4444053 - AluSc SINE Alu -38 271 1 763 214 72 99 chr5 195186373 195186410 -4443740 - MER58B DNA MER1_type -2084 336 300 2381 95 7 0 chr5 195186410 195186715 -4443435 + AluSp SINE Alu 1 307 -6 763 214 72 99 chr5 195186715 195186867 -4443283 - MER58B DNA MER1_type -2120 300 146 2496 57 10 0 chr5 195186867 195187167 -4442983 - AluY SINE Alu -8 303 1 763 214 72 99 chr5 195187167 195187195 -4442955 - MER58B DNA MER1_type -2274 146 119 1841 171 10 19 chr5 195187195 195187504 -4442646 - AluJb SINE Alu -6 306 1 763 214 72 99 chr5 195187504 195187629 -4442521 - MER58B DNA MER1_type -2301 119 1 416 212 12 35 chr5 195187870 195187955 -4442195 - AluJ/FLAM SINE Alu -227 85 3 1810 183 78 20 chr5 195188161 195188599 -4441551 + L1MB4 LINE L1 5587 6049 -131 819 211 98 25 chr5 195188595 195188857 -4441293 + L1MB7 LINE L1 5745 6029 -155 * 2082 88 50 0 chr5 195188857 195189140 -4441010 - AluSc SINE Alu -12 297 1 819 211 98 25 chr5 195189140 195189152 -4440998 + L1MB7 LINE L1 6029 6039 -145 703 217 103 29 chr5 195189240 195189521 -4440629 + L1MB4 LINE L1 5879 6180 0 2396 78 3 10 chr5 195189528 195189834 -4440316 + AluSx SINE Alu 1 304 -8 2517 38 0 10 chr5 195189909 195190201 -4439949 + AluY SINE Alu 1 289 -22 264 209 45 9 chr5 195190203 195190313 -4439837 + L1M4 LINE L1 3856 3969 -2177 7369 95 52 5 chr5 195190313 195191420 -4438730 + HSMAR1 DNA Mariner 1 1158 -129 2326 113 0 3 chr5 195191420 195191730 -4438420 + AluSx SINE Alu 1 309 -3 460 191 0 0 chr5 195191803 195191887 -4438263 - Tigger5 DNA MER2_type -1 2322 2239 888 199 20 28 chr5 195191955 195192206 -4437944 + L1M4 LINE L1 4411 4659 -1487 480 122 0 14 chr5 195192304 195192378 -4437772 - Tigger5 DNA MER2_type 0 2323 2251 254 143 86 14 chr5 195192391 195192461 -4437689 - Tigger5 DNA MER2_type 0 2323 2249 384 219 93 49 chr5 195192490 195192632 -4437518 + L1M4 LINE L1 4694 4849 -1297 2420 71 7 3 chr5 195192632 195192927 -4437223 - AluSp SINE Alu -17 296 1 384 219 93 49 chr5 195192927 195192989 -4437161 + L1M4 LINE L1 4849 4907 -1239 565 205 59 164 chr5 195193017 195193142 -4437008 + L1M4 LINE L1 4878 5015 -1131 1976 125 17 14 chr5 195193142 195193438 -4436712 + AluSx SINE Alu 7 303 -9 565 205 59 164 chr5 195193438 195193624 -4436526 + L1M4 LINE L1 5015 5219 -927 1723 185 10 0 chr5 195193624 195193916 -4436234 - AluJb SINE Alu -17 295 1 565 205 59 164 chr5 195193916 195193969 -4436181 + L1M4 LINE L1 5219 5276 -870 2425 76 0 17 chr5 195193969 195194271 -4435879 + AluSg SINE Alu 1 297 -13 1253 195 82 48 chr5 195194278 195194390 -4435760 + AluJo SINE Alu 1 108 -194 198 0 0 0 chr5 195194390 195194412 -4435738 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1253 195 82 48 chr5 195194412 195194591 -4435559 + AluJo SINE Alu 108 302 0 565 205 59 164 chr5 195194591 195194739 -4435411 + L1M4 LINE L1 5282 5345 -801 1702 158 19 0 chr5 195194747 195195013 -4435137 + AluSx SINE Alu 35 305 -7 841 149 8 0 chr5 195195064 195195185 -4434965 - AluJb SINE Alu -178 134 13 2199 125 3 6 chr5 195195211 195195522 -4434628 - AluSq SINE Alu -3 310 1 2382 95 0 3 chr5 195195727 195196033 -4434117 + AluSx SINE Alu 3 307 -5 500 262 109 33 chr5 195196310 195196493 -4433657 + MIR SINE MIR 31 227 -35 2495 81 0 0 chr5 195196742 195197040 -4433110 + AluSg SINE Alu 1 298 -12 373 190 0 38 chr5 195197139 195197218 -4432932 + AluJo SINE Alu 70 145 -157 1497 161 62 11 chr5 195197218 195197492 -4432658 + AluJb SINE Alu 1 288 -24 1434 183 68 15 chr5 195197501 195197764 -4432386 + AluSx SINE Alu 1 277 -35 225 0 0 0 chr5 195197769 195197794 -4432356 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 2146 128 0 0 chr5 195197874 195198171 -4431979 - AluSx SINE Alu -15 297 1 1465 146 157 4 chr5 195198245 195198506 -4431644 + AluSx SINE Alu 10 310 -2 509 146 0 45 chr5 195198604 195198693 -4431457 + FLAM SINE Alu 43 127 -16 1607 180 32 0 chr5 195198801 195199085 -4431065 - AluJo SINE Alu -19 293 1 1456 133 5 5 chr5 195199134 195199344 -4430806 + AluSx SINE Alu 17 226 -86 193 91 0 30 chr5 195199422 195199455 -4430695 + L2 LINE L2 3262 3293 -20 2028 133 19 7 chr5 195199584 195199892 -4430258 + AluSx SINE Alu 1 312 0 280 160 0 0 chr5 195199934 195199984 -4430166 + L1M4 LINE L1 3639 3688 -2458 2020 138 3 7 chr5 195199996 195200292 -4429858 + AluSx SINE Alu 1 295 -17 2329 81 24 0 chr5 195200299 195200594 -4429556 + AluSp SINE Alu 1 302 -11 1804 177 7 16 chr5 195200604 195200941 -4429209 + AluSx SINE Alu 1 312 0 1017 146 13 0 chr5 195200970 195201128 -4429022 + AluSg/x SINE Alu 124 283 -29 348 240 0 106 chr5 195201136 195201240 -4428910 + L1MC4 LINE L1 6611 6703 -1339 257 75 25 0 chr5 195201308 195201348 -4428802 + MADE1 DNA Mariner 1 41 -39 917 170 0 0 chr5 195201350 195201491 -4428659 - AluSg/x SINE Alu -16 294 154 2488 198 30 29 chr5 195201491 195201550 -4428600 + L1MB7 LINE L1 5469 5526 -658 2052 116 4 0 chr5 195201550 195201826 -4428324 + AluSx SINE Alu 3 279 -33 818 9 0 35 chr5 195201829 195201944 -4428206 + (GAAA)n Simple_repeat Simple_repeat 2 112 0 2488 198 30 29 chr5 195201944 195202502 -4427648 + L1MB7 LINE L1 5527 6091 -93 229 175 18 35 chr5 195202522 195202579 -4427571 - AluSx SINE Alu -3 297 242 1411 102 5 5 chr5 195202580 195202766 -4427384 - AluSx SINE Alu -126 186 1 2216 115 7 0 chr5 195202801 195203096 -4427054 - AluSp SINE Alu -16 297 1 183 80 0 0 chr5 195203129 195203154 -4426996 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1092 123 293 14 chr5 195203186 195203423 -4426727 - AluSg1 SINE Alu 0 304 9 662 186 0 16 chr5 195203520 195203644 -4426506 - FLAM_C SINE Alu -16 127 6 2229 112 0 0 chr5 195203711 195204007 -4426143 + AluSc SINE Alu 9 304 -5 1951 125 6 64 chr5 195204177 195204506 -4425644 + AluSx SINE Alu 1 310 -2 189 0 0 0 chr5 195204599 195204620 -4425530 + (A)n Simple_repeat Simple_repeat 1 21 0 1297 174 0 5 chr5 195204624 195204831 -4425319 + AluSx SINE Alu 7 212 -100 263 177 0 48 chr5 195204831 195204893 -4425257 + AluSg/x SINE Alu 76 134 -166 2039 130 7 0 chr5 195204893 195205185 -4424965 + AluSx SINE Alu 1 294 -18 2325 107 0 0 chr5 195205187 195205497 -4424653 + AluSx SINE Alu 2 311 -1 1688 195 164 17 chr5 195205819 195206290 -4423860 + MLT1F LTR MaLR 1 540 -2 22 0 0 0 chr5 195206951 195206973 -4423177 + AT_rich Low_complexity Low_complexity 1 22 0 1711 137 6 89 chr5 195207200 195207418 -4422732 + AluSx SINE Alu 5 191 -121 2031 72 90 38 chr5 195207418 195207708 -4422442 + AluY SINE Alu 1 305 -6 1711 137 6 89 chr5 195207708 195207804 -4422346 + AluSx SINE Alu 191 293 -19 456 77 0 0 chr5 195207805 195207870 -4422280 + (CATA)n Simple_repeat Simple_repeat 2 66 0 1739 160 0 50 chr5 195207876 195208022 -4422128 + AluJb SINE Alu 1 124 -188 2410 77 7 0 chr5 195208022 195208321 -4421829 + AluY SINE Alu 1 301 -10 1739 160 0 50 chr5 195208321 195208493 -4421657 + AluJb SINE Alu 124 303 -9 2382 90 0 0 chr5 195208499 195208800 -4421350 + AluSp SINE Alu 7 307 -6 1962 104 7 28 chr5 195208799 195209086 -4421064 - AluSx SINE Alu -31 281 1 * 2050 116 13 7 chr5 195209752 195210062 -4420088 + AluSx SINE Alu 1 312 0 1164 148 11 6 chr5 195210066 195210249 -4419901 + AluSg/x SINE Alu 123 306 -6 1997 159 9 18 chr5 195210295 195210634 -4419516 + MER1B DNA MER1_type 1 336 -1 1978 122 0 4 chr5 195210684 195210962 -4419188 + AluSq SINE Alu 23 299 -14 2743 198 15 98 chr5 195210971 195211063 -4419087 + L1MD2 LINE L1 5437 5535 -824 2273 109 3 3 chr5 195211063 195211367 -4418783 + AluSx SINE Alu 1 304 -8 2743 198 15 98 chr5 195211367 195211456 -4418694 + L1MD2 LINE L1 5535 5630 -729 2251 95 7 3 chr5 195211456 195211752 -4418398 + AluSx SINE Alu 1 297 -15 2743 198 15 98 chr5 195211752 195211764 -4418386 + L1MD2 LINE L1 5630 5641 -718 2118 124 0 0 chr5 195211764 195212062 -4418088 + AluSq SINE Alu 1 298 -15 2743 198 15 98 chr5 195212062 195212292 -4417858 + L1MD2 LINE L1 5641 5888 -471 2353 108 0 0 chr5 195212292 195212598 -4417552 + AluSq SINE Alu 1 306 -7 2743 198 15 98 chr5 195212598 195212775 -4417375 + L1MD2 LINE L1 5888 6078 -281 1695 167 3 7 chr5 195212775 195213068 -4417082 + AluJb SINE Alu 1 292 -20 2743 198 15 98 chr5 195213068 195213159 -4416991 + L1MD2 LINE L1 6078 6059 -300 2220 110 0 10 chr5 195213159 195213458 -4416692 - AluSx SINE Alu -15 297 2 2743 198 15 98 chr5 195213458 195213569 -4416581 + L1MD2 LINE L1 6058 6177 -182 2196 114 0 0 chr5 195213677 195213975 -4416175 + AluSg SINE Alu 1 298 -12 451 148 36 161 chr5 195213976 195214085 -4416065 + L1MD1 LINE L1 6084 6205 -154 821 189 65 13 chr5 195214085 195214238 -4415912 - FRAM SINE Alu -5 161 1 451 148 36 161 chr5 195214238 195214254 -4415896 + L1MD1 LINE L1 6205 6221 -138 2438 74 17 0 chr5 195214254 195214551 -4415599 - AluSp SINE Alu -11 302 1 451 148 36 161 chr5 195214551 195214621 -4415529 + L1MD1 LINE L1 6221 6359 0 1338 181 4 20 chr5 195214652 195214901 -4415249 + AluJo SINE Alu 55 299 -13 2293 106 3 13 chr5 195215080 195215383 -4414767 - AluSx SINE Alu -12 300 1 675 185 79 28 chr5 195215791 195215969 -4414181 + AluJo SINE Alu 120 306 -6 2093 94 27 13 chr5 195216099 195216397 -4413753 + AluSx SINE Alu 1 302 -10 2186 120 0 0 chr5 195216561 195216852 -4413298 + AluSg SINE Alu 1 291 -19 29 0 0 0 chr5 195217854 195217883 -4412267 + AT_rich Low_complexity Low_complexity 1 29 0 2184 122 3 0 chr5 195218047 195218350 -4411800 + AluSx SINE Alu 1 304 -8 2173 136 3 0 chr5 195218552 195218861 -4411289 + AluSx SINE Alu 2 311 -1 2455 82 0 0 chr5 195218861 195219167 -4410983 + AluSg1 SINE Alu 1 306 -3 886 179 93 0 chr5 195219488 195219639 -4410511 - FAM SINE Alu -6 169 5 1607 181 55 10 chr5 195220216 195220508 -4409642 - AluJo SINE Alu -7 305 1 1537 61 92 0 chr5 195220719 195220915 -4409235 - AluSc SINE Alu -13 296 83 2111 121 3 3 chr5 195220915 195221212 -4408938 - AluSq SINE Alu -16 297 1 1226 199 76 25 chr5 195221262 195221356 -4408794 + AluJb SINE Alu 22 110 -202 2556 61 0 0 chr5 195221356 195221653 -4408497 + AluY SINE Alu 1 297 -14 1226 199 76 25 chr5 195221653 195221834 -4408316 + AluJb SINE Alu 110 311 -1 588 73 74 7 chr5 195224337 195224640 -4405510 + (TA)n Simple_repeat Simple_repeat 1 323 0 950 211 0 0 chr5 195224642 195224813 -4405337 + AluJb SINE Alu 131 301 -11 355 177 102 2 chr5 195225214 195225435 -4404715 + AluJo SINE Alu 5 292 -10 2371 109 0 0 chr5 195225604 195225908 -4404242 - AluSx SINE Alu -8 304 1 335 255 106 0 chr5 195225909 195226003 -4404147 + MIR SINE MIR 99 202 -60 1281 224 139 13 chr5 195226003 195226378 -4403772 - MLT1C LTR MaLR 0 467 46 297 213 222 28 chr5 195227182 195227290 -4402860 - AluSp SINE Alu -167 136 8 845 231 85 0 chr5 195227366 195227565 -4402585 + AluJb SINE Alu 86 301 -11 203 296 122 0 chr5 195227694 195227792 -4402358 - MIR SINE MIR -94 168 59 315 286 0 31 chr5 195228041 195228139 -4402011 + MIR SINE MIR 6 100 -162 30 59 0 0 chr5 195228270 195228321 -4401829 + AT_rich Low_complexity Low_complexity 1 51 0 1603 180 14 10 chr5 195228472 195228761 -4401389 - AluJo SINE Alu -22 290 1 2023 143 0 31 chr5 195228771 195229093 -4401057 - AluSx SINE Alu 0 312 1 2530 48 7 0 chr5 195229177 195229470 -4400680 - AluY SINE Alu -16 295 1 2148 92 33 13 chr5 195229470 195229773 -4400377 - AluSx SINE Alu -3 309 1 302 151 57 0 chr5 195229866 195229919 -4400231 - AluSp SINE Alu -131 172 117 21 0 0 0 chr5 195230589 195230610 -4399540 + AT_rich Low_complexity Low_complexity 1 21 0 2258 100 0 31 chr5 195230705 195230887 -4399263 - AluSq SINE Alu -4 309 140 2290 103 6 6 chr5 195230887 195231198 -4398952 - AluSp SINE Alu -2 311 1 2258 100 0 31 chr5 195231198 195231334 -4398816 - AluSq SINE Alu -173 140 1 21 57 0 0 chr5 195231496 195231531 -4398619 + AT_rich Low_complexity Low_complexity 1 35 0 2198 95 0 7 chr5 195231642 195231945 -4398205 - AluY SINE Alu 0 301 1 1124 82 0 0 chr5 195231945 195232080 -4398070 - AluSq/x SINE Alu -178 135 1 2151 101 3 11 chr5 195232269 195232580 -4397570 - AluSx SINE Alu 0 309 1 36 53 0 0 chr5 195232581 195232638 -4397512 + AT_rich Low_complexity Low_complexity 1 57 0 1282 209 0 73 chr5 195232766 195233081 -4397069 - AluJb SINE Alu -15 297 6 207 0 0 0 chr5 195233083 195233106 -4397044 + (T)n Simple_repeat Simple_repeat 1 23 0 1231 84 0 0 chr5 195233198 195233353 -4396797 - AluY SINE Alu -5 306 152 2145 130 0 0 chr5 195233382 195233674 -4396476 + AluSx SINE Alu 3 294 -18 783 152 0 38 chr5 195233704 195233836 -4396314 + FLAM_C SINE Alu 1 127 -6 1592 190 0 7 chr5 195233994 195234273 -4395877 - AluJb SINE Alu -35 277 1 228 338 39 32 chr5 195234314 195234468 -4395682 - L2 LINE L2 -4 3309 3155 1108 156 139 64 chr5 195235258 195235381 -4394769 - MER44D DNA MER2_type -1904 587 475 2058 143 3 10 chr5 195235381 195235695 -4394455 + AluSx SINE Alu 1 312 0 1108 156 139 64 chr5 195235695 195235736 -4394414 - MER44D DNA MER2_type -2016 475 438 2291 88 0 0 chr5 195235736 195236032 -4394118 + AluY SINE Alu 1 296 -15 1108 156 139 64 chr5 195236032 195236161 -4393989 - MER44D DNA MER2_type -2053 438 1 24 53 0 0 chr5 195236374 195236412 -4393738 + AT_rich Low_complexity Low_complexity 1 38 0 1754 165 0 53 chr5 195236418 195236721 -4393429 - AluJb SINE Alu -25 287 1 596 283 25 20 chr5 195236721 195236919 -4393231 - MLT1A2 LTR MaLR -62 312 114 395 255 19 19 chr5 195236983 195237089 -4393061 - MLT1A2 LTR MaLR -268 106 1 543 183 30 92 chr5 195237227 195237391 -4392759 - L1MB7 LINE L1 -108 6076 5923 1397 139 112 4 chr5 195237406 195237657 -4392493 + MER47A DNA MER2_type 25 302 -64 1654 188 3 3 chr5 195237660 195237953 -4392197 - AluJo SINE Alu -19 293 1 2052 109 11 0 chr5 195237975 195238290 -4391860 - AluSc SINE Alu 0 318 1 1713 116 28 63 chr5 195238489 195238773 -4391377 - AluSx SINE Alu -7 305 32 315 147 0 21 chr5 195238773 195238854 -4391296 - AluJ/FLAM SINE Alu -245 57 11 1785 173 70 40 chr5 195238855 195239284 -4390866 - L1MB3 LINE L1 -64 6119 5678 1945 122 44 14 chr5 195239287 195239582 -4390568 - AluSq SINE Alu -9 304 1 1093 101 0 0 chr5 195239596 195239745 -4390405 - AluSg/x SINE Alu -3 307 159 2127 118 7 3 chr5 195239958 195240255 -4389895 - AluSx SINE Alu -14 298 1 2367 93 0 3 chr5 195240281 195240581 -4389569 + AluSp SINE Alu 1 299 -14 1569 206 3 0 chr5 195240772 195241075 -4389075 - AluJo SINE Alu 0 304 1 1730 164 58 0 chr5 195242759 195243034 -4387116 - AluSx SINE Alu -21 291 1 210 37 0 0 chr5 195243175 195243202 -4386948 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 186 71 0 0 chr5 195243420 195243448 -4386702 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2060 123 4 0 chr5 195243451 195243728 -4386422 - AluSx SINE Alu -30 282 5 887 183 35 9 chr5 195243911 195244141 -4386009 - L1MB2 LINE L1 0 6171 5936 1183 221 19 45 chr5 195244213 195244386 -4385764 - AluJb SINE Alu -6 306 143 2154 152 0 0 chr5 195244386 195244696 -4385454 - AluSx SINE Alu -2 310 1 1183 221 19 45 chr5 195244696 195244830 -4385320 - AluJb SINE Alu -169 143 7 183 340 87 0 chr5 195244907 195245010 -4385140 + MIR SINE MIR 102 213 -49 2239 97 0 35 chr5 195245333 195245644 -4384506 - AluSx SINE Alu -12 300 1 2275 89 0 0 chr5 195245656 195245978 -4384172 - AluY SINE Alu 0 322 1 25 0 0 0 chr5 195245978 195246003 -4384147 + AT_rich Low_complexity Low_complexity 1 25 0 600 138 114 32 chr5 195246003 195246126 -4384024 - FLAM_C SINE Alu 0 133 1 1400 210 40 13 chr5 195246126 195246302 -4383848 - AluJb SINE Alu -3 309 120 285 29 0 0 chr5 195246302 195246336 -4383814 + (TG)n Simple_repeat Simple_repeat 2 35 0 1400 210 40 13 chr5 195246336 195246459 -4383691 - AluJb SINE Alu -192 120 2 180 111 0 0 chr5 195246876 195246903 -4383247 + (T)n Simple_repeat Simple_repeat 1 27 0 837 168 0 0 chr5 195246912 195247049 -4383101 - AluSg/x SINE Alu 0 312 176 234 0 0 0 chr5 195247096 195247122 -4383028 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1675 134 63 0 chr5 195247122 195247391 -4382759 - AluSx SINE Alu -26 286 1 2353 105 0 3 chr5 195247642 195247955 -4382195 + AluSx SINE Alu 1 312 0 270 116 0 0 chr5 195250842 195250885 -4379265 + (TC)n Simple_repeat Simple_repeat 2 44 0 704 130 0 32 chr5 195250886 195251009 -4379141 - FLAM_C SINE Alu 0 143 25 928 117 97 0 chr5 195251180 195251325 -4378825 - AluSq SINE Alu -154 159 1 1214 223 79 9 chr5 195251687 195251860 -4378290 - L1MB7 LINE L1 -9 6175 6015 2521 55 0 13 chr5 195251860 195252167 -4377983 - AluY SINE Alu -8 303 1 1214 223 79 9 chr5 195252167 195252351 -4377799 - L1MB7 LINE L1 -169 6015 5799 330 111 0 0 chr5 195252367 195252421 -4377729 - Alu SINE Alu -2 300 247 2239 94 0 50 chr5 195252446 195252764 -4377386 + AluSx SINE Alu 1 302 -10 2516 173 20 72 chr5 195252769 195253066 -4377084 - L1MB1 LINE L1 -51 6353 6042 1879 105 0 108 chr5 195253066 195253398 -4376752 - AluSg1 SINE Alu -13 296 1 2516 173 20 72 chr5 195253398 195253578 -4376572 - L1MB1 LINE L1 -362 6042 5854 2196 116 14 0 chr5 195253578 195253871 -4376279 - AluSq SINE Alu -14 299 3 2516 173 20 72 chr5 195253871 195253935 -4376215 - L1MB1 LINE L1 -550 5854 5842 1397 141 184 16 chr5 195253935 195254191 -4375959 - AluSg1 SINE Alu -10 299 1 2516 173 20 72 chr5 195254191 195254248 -4375902 - L1MB1 LINE L1 -562 5842 5784 1679 169 7 14 chr5 195254271 195254555 -4375595 - AluJo SINE Alu -24 288 7 3008 210 66 67 chr5 195254560 195255069 -4375081 - L1MB1 LINE L1 -814 5568 5060 861 113 7 67 chr5 195255069 195255219 -4374931 - FLAM_C SINE Alu -2 141 1 3008 210 66 67 chr5 195255219 195256030 -4374120 - L1MB1 LINE L1 -1322 5060 4211 2016 89 7 7 chr5 195256062 195256332 -4373818 - AluSq SINE Alu -9 304 35 1365 234 11 0 chr5 195256333 195256611 -4373539 - AluJb SINE Alu -31 281 1 854 173 0 15 chr5 195256613 195256746 -4373404 - AluJo/FLAM SINE Alu -180 132 2 781 186 0 164 chr5 195256748 195256966 -4373184 - L1MB1 LINE L1 -2159 4223 4085 2261 70 7 13 chr5 195256966 195257267 -4372883 - AluY SINE Alu -12 299 1 781 186 0 164 chr5 195257267 195257408 -4372742 - L1MB1 LINE L1 -2297 4085 3923 * 2448 251 79 33 chr5 195257383 195257585 -4372565 - L1MB1 LINE L1 -2968 3414 3223 2311 81 3 0 chr5 195257585 195257883 -4372267 - AluY SINE Alu -12 299 1 2448 251 79 33 chr5 195257883 195258081 -4372069 - L1MB1 LINE L1 -3159 3223 3036 2009 138 10 0 chr5 195258081 195258370 -4371780 + AluSx SINE Alu 1 292 -20 2448 251 79 33 chr5 195258370 195258962 -4371188 - L1MB1 LINE L1 -3346 3036 2373 1828 173 7 10 chr5 195258962 195259269 -4370881 - AluSx SINE Alu -6 306 1 1750 145 3 30 chr5 195259271 195259567 -4370583 - AluSx SINE Alu -20 292 5 721 267 32 4 chr5 195259588 195259865 -4370285 - L1MB1 LINE L1 -3999 2385 2101 1954 128 21 17 chr5 195259879 195260167 -4369983 - AluSg SINE Alu -21 289 1 2007 143 3 10 chr5 195260195 195260509 -4369641 - AluSx SINE Alu 0 312 1 1416 154 0 0 chr5 195260518 195260738 -4369412 - AluSg/x SINE Alu -3 309 90 1656 233 60 32 chr5 195260738 195261455 -4368695 - L1M4 LINE L1 -513 5665 4921 1164 148 5 25 chr5 195261465 195261667 -4368483 - AluSg/x SINE Alu -1 311 114 2148 122 0 3 chr5 195261688 195261983 -4368167 + AluSx SINE Alu 1 294 -18 2465 247 88 69 chr5 195262008 195262107 -4368043 - L1M4 LINE L1 -1240 4906 4810 1930 139 0 27 chr5 195262107 195262408 -4367742 + AluSx SINE Alu 9 301 -11 2465 247 88 69 chr5 195262408 195263529 -4366621 - L1M4 LINE L1 -1336 4810 3663 2181 107 17 3 chr5 195263543 195263841 -4366309 - AluSx SINE Alu -10 302 1 23 54 0 0 chr5 195264137 195264174 -4365976 + AT_rich Low_complexity Low_complexity 1 37 0 417 253 153 23 chr5 195264329 195264445 -4365705 - L1MC4a LINE L1 -1878 5930 5830 1809 156 42 0 chr5 195264445 195264733 -4365417 - AluJb SINE Alu -12 300 1 417 253 153 23 chr5 195264733 195264877 -4365273 - L1MC4a LINE L1 -1978 5830 5636 563 216 30 45 chr5 195264883 195265017 -4365133 - FLAM_A SINE Alu -1 132 1 371 244 125 6 chr5 195265408 195265584 -4364566 + L1MC5 LINE L1 7658 7854 -107 32 20 0 20 chr5 195265846 195265865 -4364285 + AT_rich Low_complexity Low_complexity 1 19 -30 1848 110 51 4 chr5 195265865 195266138 -4364012 - AluSx SINE Alu -26 286 1 32 20 0 20 chr5 195266138 195266168 -4363982 + AT_rich Low_complexity Low_complexity 19 49 0 1007 167 12 0 chr5 195266197 195266359 -4363791 + AluSp SINE Alu 134 297 -16 228 230 115 35 chr5 195266365 195266478 -4363672 - L1MC5 LINE L1 -480 7481 7360 758 201 0 55 chr5 195266478 195266642 -4363508 + MER44D DNA MER2_type 1 425 -184 491 184 0 0 chr5 195266648 195266735 -4363415 - AluSx SINE Alu 0 309 223 1163 157 0 0 chr5 195266743 195266915 -4363235 - AluSx SINE Alu -140 172 1 1157 281 33 22 chr5 195267159 195267614 -4362536 - L1MB8 LINE L1 -1 6177 5718 196 226 57 0 chr5 195267963 195268016 -4362134 + MIR SINE MIR 95 150 -58 2154 139 0 0 chr5 195268135 195268438 -4361712 - AluSx SINE Alu -5 307 5 816 133 0 0 chr5 195268515 195268643 -4361507 - AluSg/x SINE Alu -7 305 178 361 148 0 0 chr5 195268703 195268757 -4361393 - MER58 DNA MER1_type -24 2396 2343 2054 139 0 3 chr5 195268942 195269244 -4360906 + AluSx SINE Alu 1 301 -11 1880 155 3 0 chr5 195269499 195269783 -4360367 - AluJo SINE Alu -27 285 1 1678 131 33 0 chr5 195269869 195270114 -4360036 - AluSx SINE Alu -55 257 5 1164 213 8 4 chr5 195270305 195270558 -4359592 - AluJo SINE Alu -19 293 40 2792 190 50 23 chr5 195270764 195271327 -4358823 + Tigger4(Zombi) DNA MER2_type 1 578 -2153 942 130 0 56 chr5 195271309 195271471 -4358679 + Tigger4(Zombi) DNA MER2_type 1017 1169 -1562 * 1439 193 51 24 chr5 195271471 195271767 -4358383 - AluJb SINE Alu -8 304 1 1234 145 22 44 chr5 195271779 195272007 -4358143 - AluSg/x SINE Alu -19 291 69 9026 129 52 13 chr5 195272025 195272831 -4357319 + Tigger4(Zombi) DNA MER2_type 1160 1933 -798 2013 134 3 7 chr5 195272831 195273137 -4357013 + AluSx SINE Alu 1 305 -7 9026 129 52 13 chr5 195273137 195273843 -4356307 + Tigger4(Zombi) DNA MER2_type 1933 2731 0 206 288 164 0 chr5 195274450 195274523 -4355627 + L2 LINE L2 3188 3272 0 257 239 97 26 chr5 195274563 195274676 -4355474 + L1ME4a LINE L1 5823 5943 -178 457 266 106 84 chr5 195274704 195275236 -4354914 - L1MC5 LINE L1 -186 7775 7221 1620 164 26 39 chr5 195275236 195275541 -4354609 - AluJb SINE Alu -11 301 1 457 266 106 84 chr5 195275541 195275765 -4354385 - L1MC5 LINE L1 -740 7221 7003 1729 153 24 53 chr5 195275876 195275924 -4354226 - L1MB3 LINE L1 -4 6179 6131 2404 91 0 3 chr5 195275924 195276232 -4353918 - AluY SINE Alu -4 307 1 1729 153 24 53 chr5 195276232 195276563 -4353587 - L1MB3 LINE L1 -52 6131 5811 326 178 122 0 chr5 195277234 195277324 -4352826 + MIR SINE MIR 53 153 -109 637 180 0 0 chr5 195278630 195278730 -4351420 - AluY SINE Alu -13 298 199 2497 58 0 0 chr5 195278831 195279126 -4351024 + AluY SINE Alu 1 295 -16 1428 160 17 59 chr5 195279132 195279419 -4350731 + AluJo SINE Alu 9 283 -29 312 258 204 0 chr5 195279470 195279602 -4350548 - L1 LINE L1 -1087 5059 4901 2057 115 0 39 chr5 195279614 195279926 -4350224 + AluSx SINE Alu 1 300 -12 210 71 0 0 chr5 195280473 195280501 -4349649 + (TG)n Simple_repeat Simple_repeat 1 28 0 2039 130 0 3 chr5 195280914 195281240 -4348910 - AluSp SINE Alu 0 325 1 222 37 0 0 chr5 195281590 195281617 -4348533 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1895 110 0 55 chr5 195281617 195281909 -4348241 - AluSx SINE Alu -36 276 1 2093 129 3 3 chr5 195282106 195282400 -4347750 - AluSp SINE Alu -15 298 5 349 259 157 65 chr5 195283073 195283289 -4346861 - L3 LINE CR1 -435 1142 907 895 220 10 82 chr5 195283341 195283645 -4346505 + AluJb SINE Alu 1 282 -30 2233 112 0 13 chr5 195284036 195284348 -4345802 - AluSc SINE Alu -1 308 1 2226 125 3 0 chr5 195284368 195284680 -4345470 - AluSq SINE Alu 0 313 1 1928 151 10 0 chr5 195285558 195285849 -4344301 + AluSx SINE Alu 1 294 -18 725 168 38 23 chr5 195285860 195285991 -4344159 + FLAM_C SINE Alu 1 133 0 780 272 53 37 chr5 195287161 195287407 -4342743 - MIR SINE MIR -5 257 8 779 198 6 79 chr5 195287608 195287785 -4342365 + AluJo SINE Alu 7 170 -142 2222 58 3 74 chr5 195287839 195288197 -4341953 - AluY SINE Alu 0 311 1 1407 189 23 4 chr5 195288240 195288504 -4341646 + AluJb SINE Alu 26 294 -18 578 235 15 15 chr5 195288743 195288875 -4341275 - MER94 DNA DNA 0 134 3 2001 86 3 23 chr5 195389302 195389605 -4240545 + AluSx SINE Alu 1 297 -15 2162 115 0 0 chr5 195389864 195390159 -4239991 - AluSg SINE Alu -14 296 2 665 317 74 0 chr5 195390264 195390494 -4239656 - MIR SINE MIR 0 262 16 298 239 0 0 chr5 195391673 195391740 -4238410 - MLT1L LTR MaLR 0 624 558 2602 42 0 0 chr5 195391747 195392058 -4238092 - AluY SINE Alu 0 311 1 1027 164 24 34 chr5 195392066 195392109 -4238041 - MLT1E3 LTR MaLR -419 205 163 2384 79 0 0 chr5 195392109 195392412 -4237738 - AluY SINE Alu -8 303 1 1027 164 24 34 chr5 195392412 195392575 -4237575 - MLT1E3 LTR MaLR -461 163 1 1303 263 74 76 chr5 195392678 195393084 -4237066 + MLT1K LTR MaLR 23 428 -160 2027 212 120 40 chr5 195393084 195393208 -4236942 + MLT1F LTR MaLR 1 114 -428 1992 110 20 10 chr5 195393208 195393500 -4236650 + AluSx SINE Alu 1 295 -17 2027 212 120 40 chr5 195393500 195393876 -4236274 + MLT1F LTR MaLR 114 541 -1 1303 263 74 76 chr5 195393876 195393951 -4236199 + MLT1K LTR MaLR 428 502 -86 1634 181 3 13 chr5 195393951 195394250 -4235900 + AluJb SINE Alu 1 296 -16 1303 263 74 76 chr5 195394250 195394334 -4235816 + MLT1K LTR MaLR 502 588 0 726 220 0 0 chr5 195394586 195394718 -4235432 - FLAM_A SINE Alu -1 132 1 2027 118 0 13 chr5 195395077 195395390 -4234760 - AluSg SINE Alu -1 309 1 991 277 87 21 chr5 195395658 195396037 -4234113 - MLT1L LTR MaLR -71 544 141 346 224 86 52 chr5 195396215 195396331 -4233819 + LTR67 LTR ERVL 428 547 -10 1370 169 3 53 chr5 195396392 195396712 -4233438 - AluJb SINE Alu -8 304 1 507 327 51 23 chr5 195396824 195397041 -4233109 + MLT1K LTR MaLR 3 225 -363 1074 165 0 0 chr5 195397041 195397211 -4232939 + AluSg/x SINE Alu 130 299 -11 1016 246 44 100 chr5 195397211 195397417 -4232733 + MLT1K LTR MaLR 220 436 -152 2086 113 10 7 chr5 195397417 195397718 -4232432 + AluSx SINE Alu 2 303 -9 1016 246 44 100 chr5 195397718 195397750 -4232400 + MLT1K LTR MaLR 436 468 -120 2219 88 0 31 chr5 195397750 195398069 -4232081 + AluSc SINE Alu 1 309 0 1016 246 44 100 chr5 195398069 195398219 -4231931 + MLT1K LTR MaLR 468 587 -1 216 0 0 0 chr5 195398253 195398277 -4231873 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 249 351 55 10 chr5 195398338 195398565 -4231585 + MIR3 SINE MIR 8 245 -17 2166 107 10 0 chr5 195398812 195399112 -4231038 - AluSg SINE Alu -7 303 1 2284 84 3 0 chr5 195399281 195399578 -4230572 - AluSq SINE Alu -15 298 1 336 127 36 0 chr5 195399582 195399637 -4230513 + MER3 DNA MER1_type 153 209 0 252 294 8 48 chr5 195399646 195399772 -4230378 - L2 LINE L2 -412 2902 2782 584 150 8 63 chr5 195399780 195399907 -4230243 - FLAM_A SINE Alu 0 142 23 453 121 12 72 chr5 195399913 195400021 -4230129 - AluJ/FRAM SINE Alu 0 312 214 306 153 34 0 chr5 195400052 195400111 -4230039 - MLT1F1 LTR MaLR 0 567 507 524 147 132 23 chr5 195400219 195400348 -4229802 + FRAM SINE Alu 18 160 -16 2009 103 14 7 chr5 195400351 195400643 -4229507 + AluSx SINE Alu 1 294 -18 2054 92 28 47 chr5 195400654 195400971 -4229179 + AluSx SINE Alu 1 311 -1 2011 99 39 3 chr5 195400979 195401263 -4228887 + AluSq SINE Alu 2 295 -18 251 203 34 17 chr5 195401442 195401501 -4228649 - L2 LINE L2 -556 2758 2699 303 227 0 30 chr5 195401674 195401740 -4228410 + MLT1I LTR MaLR 1 64 -345 1661 227 91 52 chr5 195401745 195402347 -4227803 - MLT1G LTR MaLR -4 586 1 1971 119 0 0 chr5 195402370 195402669 -4227481 - AluSx SINE Alu 0 304 6 1109 232 27 59 chr5 195402669 195403016 -4227134 + MLT1I LTR MaLR 81 402 -7 1804 106 73 4 chr5 195403018 195403293 -4226857 - AluSx SINE Alu -18 294 1 645 211 78 20 chr5 195403315 195403519 -4226631 - L1MC4a LINE L1 -1904 5904 5689 663 109 0 0 chr5 195403524 195403616 -4226534 - AluSx SINE Alu -7 302 211 924 143 0 0 chr5 195403616 195403756 -4226394 - AluSx SINE Alu -168 144 5 1904 137 3 3 chr5 195403799 195404091 -4226059 - AluSg SINE Alu -18 292 1 2032 113 3 3 chr5 195404174 195404465 -4225685 - AluSx SINE Alu -21 291 1 319 298 64 80 chr5 195405097 195405423 -4224727 + L2 LINE L2 2656 2976 -338 1770 84 0 0 chr5 195405530 195405757 -4224393 - AluY SINE Alu -6 305 79 610 315 171 5 chr5 195405781 195406156 -4223994 + L2 LINE L2 2534 2970 -344 329 232 50 30 chr5 195406302 195406401 -4223749 + L2 LINE L2 3172 3272 0 25 108 0 0 chr5 195407330 195407432 -4222718 + GC_rich Low_complexity Low_complexity 1 102 0 231 61 0 0 chr5 195407438 195407471 -4222679 + (CCGAG)n Simple_repeat Simple_repeat 2 34 0 31 26 0 0 chr5 195407502 195407540 -4222610 + GC_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr5 195407603 195407631 -4222519 + GC_rich Low_complexity Low_complexity 1 28 0 220 307 27 13 chr5 195408404 195408479 -4221671 - L2 LINE L2 -10 3303 3228 270 298 58 41 chr5 195408550 195408671 -4221479 - MIR3 SINE MIR -38 170 48 1951 97 47 4 chr5 195409138 195409416 -4220734 - AluSx SINE Alu -22 290 1 196 329 41 27 chr5 195409419 195409492 -4220658 + MIR3 SINE MIR 82 155 -53 195 294 135 61 chr5 195409739 195409902 -4220248 + MIR SINE MIR 22 196 -66 193 244 174 12 chr5 195410419 195410505 -4219645 - MIR SINE MIR -72 136 37 335 283 104 68 chr5 195410651 195410958 -4219192 + MER102b DNA MER1_type 10 327 -14 271 221 158 3 chr5 195412441 195412559 -4217591 + MIR SINE MIR 43 185 -77 218 293 96 106 chr5 195414984 195415192 -4214958 + MIR SINE MIR 28 233 -29 182 290 51 101 chr5 195416009 195416147 -4214003 - L2 LINE L2 -2 3270 3140 443 349 60 14 chr5 195416195 195416413 -4213737 + MIR SINE MIR 29 256 -6 318 253 169 36 chr5 195416438 195416604 -4213546 + Charlie8 DNA MER1_type 1 188 -2229 260 248 47 54 chr5 195417471 195417620 -4212530 - MLT1K LTR MaLR -108 480 333 210 143 0 0 chr5 195417642 195417677 -4212473 + (TCTCC)n Simple_repeat Simple_repeat 5 39 0 2259 106 0 0 chr5 195417677 195418026 -4212124 - AluSx SINE Alu 0 349 1 274 304 0 22 chr5 195418339 195418431 -4211719 - MLT1K LTR MaLR -29 559 470 828 288 113 50 chr5 195418685 195418858 -4211292 - L2 LINE L2 -1 3312 3151 2279 71 10 3 chr5 195418858 195419154 -4210996 + AluSp SINE Alu 1 298 -15 828 288 113 50 chr5 195419154 195419421 -4210729 - L2 LINE L2 -162 3151 2844 431 105 0 0 chr5 195419567 195419624 -4210526 - AluS SINE Alu -215 98 42 556 101 34 0 chr5 195419628 195419717 -4210433 - L1M4 LINE L1 -522 5656 5565 3197 169 28 45 chr5 195419952 195420028 -4210122 - L1MB8 LINE L1 0 6178 6102 2272 89 0 7 chr5 195420028 195420330 -4209820 + AluSq SINE Alu 1 300 -13 3197 169 28 45 chr5 195420330 195420896 -4209254 - L1MB8 LINE L1 -76 6102 5547 231 305 130 8 chr5 195425214 195425345 -4204805 - L2 LINE L2 0 3272 3126 528 296 110 63 chr5 195426212 195426529 -4203621 + MLT1K LTR MaLR 202 533 -55 373 113 0 28 chr5 195426539 195426610 -4203540 + (TTTC)n Simple_repeat Simple_repeat 4 72 0 785 154 0 0 chr5 195426614 195426737 -4203413 - AluSg/x SINE Alu 0 312 190 25 51 0 0 chr5 195427623 195427662 -4202488 + GC_rich Low_complexity Low_complexity 1 39 0 25 51 0 0 chr5 195427824 195427863 -4202287 + GC_rich Low_complexity Low_complexity 1 39 0 191 36 36 0 chr5 195428015 195428043 -4202107 + (CCCCCT)n Simple_repeat Simple_repeat 2 30 0 646 221 23 41 chr5 195429099 195429293 -4200857 - MIR SINE MIR -25 237 44 192 125 0 0 chr5 195429490 195429522 -4200628 + (TCCC)n Simple_repeat Simple_repeat 2 33 0 511 314 13 39 chr5 195429771 195430000 -4200150 - Charlie8 DNA MER1_type -2194 223 1 203 397 66 0 chr5 195430143 195430279 -4199871 - MIR3 SINE MIR -61 147 3 827 157 62 39 chr5 195431506 195431684 -4198466 + MER5A DNA MER1_type 1 182 -7 268 330 52 0 chr5 195432019 195432116 -4198034 + MIR SINE MIR 81 182 -80 267 229 0 29 chr5 195432608 195432678 -4197472 - MIR SINE MIR -112 150 83 364 236 139 7 chr5 195432718 195432862 -4197288 + L1MDa LINE L1 2358 2520 -4020 262 274 36 24 chr5 195433310 195433394 -4196756 + MIR SINE MIR 77 161 -101 436 261 59 0 chr5 195433672 195433791 -4196359 + MIR SINE MIR 24 149 -113 242 310 224 0 chr5 195434384 195434500 -4195650 + MIR SINE MIR 32 173 -89 25 31 0 0 chr5 195435270 195435302 -4194848 + GC_rich Low_complexity Low_complexity 1 32 0 24 67 0 0 chr5 195435497 195435542 -4194608 + GC_rich Low_complexity Low_complexity 1 45 0 229 268 49 16 chr5 195435998 195436121 -4194029 + (CACG)n Simple_repeat Simple_repeat 1 127 0 25 31 0 0 chr5 195436789 195436821 -4193329 + GC_rich Low_complexity Low_complexity 1 32 0 237 33 0 0 chr5 195437340 195437370 -4192780 + (A)n Simple_repeat Simple_repeat 1 30 0 227 31 31 0 chr5 195440333 195440365 -4189785 + (GGA)n Simple_repeat Simple_repeat 1 33 0 1916 139 3 16 chr5 195441442 195441751 -4188399 - AluJb SINE Alu -7 305 1 2783 7 0 0 chr5 195441759 195442066 -4188084 - AluYa5 SINE Alu -4 307 1 217 365 84 51 chr5 195442319 195442497 -4187653 + L2 LINE L2 2575 2758 -556 448 320 57 8 chr5 195442514 195442761 -4187389 + Charlie8 DNA MER1_type 27 285 -2132 2310 61 20 3 chr5 195443712 195444005 -4186145 - AluY SINE Alu -13 298 1 1956 86 0 4 chr5 195444534 195444826 -4185324 + AluSx SINE Alu 34 324 0 2398 90 0 0 chr5 195444834 195445144 -4185006 + AluSg SINE Alu 1 310 0 999 79 0 0 chr5 195445147 195445273 -4184877 + AluSc SINE Alu 1 126 -183 369 0 0 0 chr5 195445273 195445314 -4184836 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 1673 81 9 0 chr5 195445326 195445537 -4184613 + AluSq SINE Alu 2 214 -99 2366 64 3 22 chr5 195445538 195445852 -4184298 + AluY SINE Alu 1 308 -3 1494 162 40 7 chr5 195445860 195446229 -4183921 + L1MB3 LINE L1 5760 6167 -7 2258 97 3 0 chr5 195446239 195446537 -4183613 + AluSx SINE Alu 1 299 -13 205 344 135 0 chr5 195449202 195449298 -4180852 + MIR3 SINE MIR 78 186 -22 367 288 0 43 chr5 195450537 195450676 -4179474 + GA-rich Low_complexity Low_complexity 3 135 0 24 32 0 0 chr5 195453510 195453541 -4176609 + GC_rich Low_complexity Low_complexity 1 31 0 31 104 0 0 chr5 195453780 195453895 -4176255 + GC_rich Low_complexity Low_complexity 1 115 0 210 195 12 61 chr5 195453958 195454040 -4176110 + G-rich Low_complexity Low_complexity 1 78 0 207 139 0 0 chr5 195454150 195454186 -4175964 + (CGGA)n Simple_repeat Simple_repeat 1 36 0 26 50 0 0 chr5 195454259 195454299 -4175851 + GC_rich Low_complexity Low_complexity 1 40 0 222 284 42 0 chr5 195454299 195454394 -4175756 + (CCCGG)n Simple_repeat Simple_repeat 1 99 0 283 314 39 0 chr5 195454398 195454551 -4175599 + (CCCCAG)n Simple_repeat Simple_repeat 1 159 0 616 136 0 0 chr5 195456035 195456138 -4174012 - L1MC3 LINE L1 -2 7783 7681 289 330 31 0 chr5 195456273 195456370 -4173780 + L2 LINE L2 1856 1955 -1359 256 262 36 48 chr5 195456671 195456755 -4173395 + MIR3 SINE MIR 79 161 -47 234 259 0 0 chr5 195456772 195456830 -4173320 + CT-rich Low_complexity Low_complexity 4 61 0 537 270 32 32 chr5 195457069 195457258 -4172892 + MIR SINE MIR 74 262 0 378 250 0 78 chr5 195457249 195457365 -4172785 - MIR SINE MIR -109 153 47 * 1210 221 58 41 chr5 195457646 195457740 -4172410 + MLT1K LTR MaLR 198 289 -299 2219 94 0 3 chr5 195457740 195458063 -4172087 + AluSc SINE Alu 2 298 -11 1210 221 58 41 chr5 195458063 195458312 -4171838 + MLT1K LTR MaLR 289 547 -41 2290 95 0 0 chr5 195459108 195459403 -4170747 - AluSx SINE Alu -17 295 1 389 283 0 10 chr5 195459407 195459506 -4170644 - MIR SINE MIR -64 144 47 418 226 70 0 chr5 195459592 195459707 -4170443 + MIR SINE MIR 69 191 -71 274 341 121 27 chr5 195459965 195460296 -4169854 + L2 LINE L2 1761 2122 -1192 340 331 63 6 chr5 195460299 195460474 -4169676 + Charlie8 DNA MER1_type 14 198 -2219 404 266 57 0 chr5 195460529 195460653 -4169497 + Charlie8 DNA MER1_type 389 519 -1898 288 152 0 0 chr5 195460852 195460898 -4169252 - L2 LINE L2 -6 3266 3221 460 83 0 0 chr5 195460939 195460999 -4169151 + Alu SINE Alu 1 60 -250 1340 170 42 113 chr5 195461081 195461254 -4168896 - AluJb SINE Alu 0 312 128 2256 97 7 0 chr5 195461254 195461552 -4168598 - AluSx SINE Alu -12 300 1 252 0 0 0 chr5 195461554 195461582 -4168568 + (TA)n Simple_repeat Simple_repeat 2 29 0 2236 109 0 3 chr5 195461582 195461884 -4168266 - AluSx SINE Alu -11 301 1 1340 170 42 113 chr5 195461884 195461929 -4168221 - AluJb SINE Alu -184 128 81 1737 174 0 7 chr5 195461929 195462234 -4167916 + AluSc SINE Alu 1 303 -6 1340 170 42 113 chr5 195462234 195462346 -4167804 - AluJb SINE Alu -231 81 1 275 244 133 11 chr5 195462699 195462789 -4167361 + MIR SINE MIR 45 145 -63 841 154 15 0 chr5 195462791 195462921 -4167229 + FLAM_C SINE Alu 1 132 -1 1971 135 3 22 chr5 195463438 195463749 -4166401 - AluSx SINE Alu -1 311 7 1054 278 96 44 chr5 195464919 195465865 -4164285 + L2 LINE L2 2272 3284 -29 249 380 60 0 chr5 195466045 195466145 -4164005 + MIR SINE MIR 79 184 -78 1872 159 0 7 chr5 195466308 195466610 -4163540 + AluJo SINE Alu 2 301 -11 1198 112 0 43 chr5 195466628 195466815 -4163335 - AluJo SINE Alu -125 187 9 257 274 48 12 chr5 195467015 195467099 -4163051 - MIR SINE MIR -140 122 36 2298 60 27 7 chr5 195467237 195467535 -4162615 - AluY SINE Alu -7 304 1 1954 105 60 0 chr5 195467536 195467821 -4162329 - AluSx SINE Alu -2 310 9 1132 263 127 25 chr5 195467826 195468259 -4161891 + MLT1J LTR MaLR 33 509 -2 181 281 49 37 chr5 195468384 195468466 -4161684 + MIR3 SINE MIR 15 97 -111 2212 93 3 10 chr5 195469203 195469505 -4160645 + AluSx SINE Alu 1 300 -12 998 120 0 6 chr5 195471208 195471375 -4158775 + (GGAA)n Simple_repeat Simple_repeat 4 169 0 209 189 0 0 chr5 195472040 195472077 -4158073 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 180 176 0 0 chr5 195472784 195472818 -4157332 + (CAGA)n Simple_repeat Simple_repeat 1 34 0 492 243 62 15 chr5 195474713 195474896 -4155254 - MIR SINE MIR -61 201 12 273 299 61 5 chr5 195474966 195475076 -4155074 - MIR3 SINE MIR -47 161 42 251 387 89 0 chr5 195476515 195476683 -4153467 + MIR SINE MIR 45 227 -35 522 0 0 0 chr5 195477608 195477666 -4152484 + (GGGGA)n Simple_repeat Simple_repeat 1 58 0 201 74 0 0 chr5 195478000 195478027 -4152123 + (CGGGGG)n Simple_repeat Simple_repeat 5 31 0 239 309 59 0 chr5 195478551 195478619 -4151531 + MIR SINE MIR 110 181 -81 2344 258 146 45 chr5 195478958 195479627 -4150523 + L2 LINE L2 1545 2145 -1168 1556 112 140 67 chr5 195479627 195479817 -4150333 + MER1B DNA MER1_type 1 224 -2486 2192 104 0 13 chr5 195479817 195480124 -4150026 + AluSx SINE Alu 1 303 -9 1556 112 140 67 chr5 195480124 195480247 -4149903 + MER1B DNA MER1_type 224 337 0 2344 258 146 45 chr5 195480247 195480818 -4149332 + L2 LINE L2 2145 2657 -656 2252 116 0 0 chr5 195480818 195481128 -4149022 - AluSx SINE Alu 0 312 3 2344 258 146 45 chr5 195481128 195481352 -4148798 + L2 LINE L2 2657 3173 -140 242 286 0 0 chr5 195481911 195481981 -4148169 + MIR SINE MIR 33 102 -106 191 293 38 90 chr5 195482099 195482232 -4147918 - L3 LINE CR1 -191 1386 1261 422 297 61 0 chr5 195482245 195482393 -4147757 - L2 LINE L2 -981 2333 2177 486 271 21 42 chr5 195482394 195482538 -4147612 + MER5B DNA MER1_type 1 141 -37 180 237 51 0 chr5 195482566 195482625 -4147525 - MER5B DNA MER1_type -115 63 2 640 292 294 18 chr5 195482657 195483701 -4146449 - L2 LINE L2 -1219 2095 764 336 270 35 26 chr5 195483820 195483935 -4146215 + L2 LINE L2 3141 3256 -16 182 216 27 0 chr5 195483956 195483993 -4146157 - MIR SINE MIR -59 149 112 193 316 123 35 chr5 195485812 195485926 -4144224 + MIR3 SINE MIR 35 158 -50 582 138 0 0 chr5 195486263 195486350 -4143800 - AluSg/x SINE Alu -21 288 202 2384 63 0 10 chr5 195486350 195486650 -4143500 - AluY SINE Alu -14 297 1 1637 97 0 5 chr5 195486650 195486866 -4143284 - AluSq SINE Alu -97 216 1 808 221 13 11 chr5 195486866 195486903 -4143247 - L1MB7 LINE L1 -39 6141 6106 2381 71 13 3 chr5 195486903 195487213 -4142937 - AluSp SINE Alu 0 313 1 808 221 13 11 chr5 195487213 195487400 -4142750 - L1MB7 LINE L1 -74 6106 5927 894 159 0 0 chr5 195487411 195487543 -4142607 - FLAM_C SINE Alu 0 133 2 640 236 0 0 chr5 195487544 195487688 -4142462 - L1MB7 LINE L1 -348 5826 5683 798 110 0 0 chr5 195487691 195487800 -4142350 - AluJb SINE Alu -21 291 183 518 185 42 0 chr5 195487800 195487919 -4142231 - L1MB7 LINE L1 -481 5693 5570 339 302 121 8 chr5 195487967 195488348 -4141802 + L2 LINE L2 2737 3165 -148 317 265 48 0 chr5 195490962 195491045 -4139105 - MIR SINE MIR -110 152 66 185 351 107 0 chr5 195491209 195491340 -4138810 + L2 LINE L2 3125 3269 -3 253 299 108 84 chr5 195494597 195494811 -4135339 + L2 LINE L2 2954 3172 -100 221 259 114 6 chr5 195495518 195495692 -4134458 - MIR3 SINE MIR -50 158 45 180 313 109 50 chr5 195495853 195496054 -4134096 - L3 LINE CR1 -306 1271 1059 912 138 0 0 chr5 195498334 195498464 -4131686 + FLAM_C SINE Alu 1 130 -3 193 337 25 55 chr5 195498946 195499109 -4131041 - MIR3 SINE MIR -41 167 10 * 242 276 150 8 chr5 195499057 195499184 -4130966 + MIR SINE MIR 20 164 -98 191 36 36 0 chr5 195499362 195499390 -4130760 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 615 166 59 150 chr5 195501870 195502011 -4128139 + MER2 DNA MER2_type 1 153 -192 884 136 0 23 chr5 195502011 195502143 -4128007 - FLAM_C SINE Alu -4 129 1 615 166 59 150 chr5 195502143 195502217 -4127933 + MER2 DNA MER2_type 153 232 -113 2125 103 0 30 chr5 195502217 195502519 -4127631 - AluSx SINE Alu -11 301 9 615 166 59 150 chr5 195502519 195502534 -4127616 + MER2 DNA MER2_type 232 247 -98 1834 112 74 0 chr5 195502534 195502803 -4127347 - AluSx SINE Alu -23 289 1 615 166 59 150 chr5 195502803 195502890 -4127260 + MER2 DNA MER2_type 247 291 -54 243 378 55 0 chr5 195502920 195503047 -4127103 + L2 LINE L2 2916 3049 -223 209 175 0 105 chr5 195504937 195504994 -4125156 + MIR SINE MIR 103 153 -109 382 320 0 0 chr5 195505723 195505826 -4124324 + MIR SINE MIR 81 183 -79 246 342 155 32 chr5 195506122 195506309 -4123841 - MIR SINE MIR -21 241 32 512 323 49 83 chr5 195506328 195506795 -4123355 - L2 LINE L2 -5 3267 2817 813 246 70 13 chr5 195507047 195507275 -4122875 - MIR SINE MIR -19 243 3 314 322 197 51 chr5 195507279 195507999 -4122151 - L2 LINE L2 -850 2464 1640 180 0 0 0 chr5 195508482 195508502 -4121648 + (TGAG)n Simple_repeat Simple_repeat 4 23 0 383 263 186 41 chr5 195509783 195510224 -4119926 + L2 LINE L2 2302 2806 -508 509 279 26 1 chr5 195511222 195511380 -4118770 + MIR SINE MIR 11 170 -62 401 318 45 8 chr5 195512457 195512589 -4117561 + L2 LINE L2 3117 3253 -19 2594 43 0 7 chr5 195512813 195513112 -4117038 - AluY SINE Alu -14 297 1 2294 93 0 35 chr5 195513798 195514109 -4116041 - AluSg SINE Alu -10 300 1 1563 175 7 31 chr5 195514120 195514411 -4115739 - AluJo SINE Alu -14 298 15 522 265 100 34 chr5 195514984 195515305 -4114845 + L1ME4a LINE L1 5605 5946 -175 1866 152 35 7 chr5 195515429 195515719 -4114431 - AluJo SINE Alu -14 298 1 207 152 0 0 chr5 195517511 195517557 -4112593 + GA-rich Low_complexity Low_complexity 3 48 0 649 239 102 35 chr5 195518710 195518936 -4111214 - MIR SINE MIR 0 262 22 462 301 174 9 chr5 195519261 195519480 -4110670 + MIR SINE MIR 8 262 0 2561 68 0 3 chr5 195519530 195519839 -4110311 + AluY SINE Alu 1 308 -3 408 201 83 22 chr5 195520052 195520299 -4109851 + MLT1H LTR MaLR 208 549 0 2599 56 0 3 chr5 195520919 195521222 -4108928 - AluY SINE Alu -9 302 1 1814 160 46 0 chr5 195521257 195521563 -4108587 + MER2 DNA MER2_type 1 320 -25 564 241 108 28 chr5 195521737 195521949 -4108201 + MIR SINE MIR 34 262 0 259 236 28 28 chr5 195523339 195523411 -4106739 + L2 LINE L2 3200 3271 -1 3605 138 148 33 chr5 195523900 195524554 -4105596 + Charlie1 DNA MER1_type 1765 2544 -217 2224 127 0 0 chr5 195524554 195524846 -4105304 - AluSx SINE Alu -20 292 1 3605 138 148 33 chr5 195524846 195525058 -4105092 + Charlie1 DNA MER1_type 2544 2730 -31 593 219 17 0 chr5 195525062 195525181 -4104969 + AluSg/x SINE Alu 180 300 -10 252 294 135 35 chr5 195525781 195525951 -4104199 + L2 LINE L2 3126 3312 -1 671 269 70 26 chr5 195526487 195526714 -4103436 + MIR SINE MIR 20 256 -6 2740 29 3 3 chr5 195526784 195527094 -4103056 - AluY SINE Alu -1 310 1 310 325 50 8 chr5 195527758 195527878 -4102272 + L2 LINE L2 3134 3258 -14 257 387 36 0 chr5 195528072 195528183 -4101967 - MER5B DNA MER1_type 0 178 64 207 367 0 20 chr5 195528304 195528402 -4101748 + L2 LINE L2 2713 2808 -506 232 313 30 10 chr5 195528447 195528546 -4101604 + L2 LINE L2 2921 3021 -251 2654 51 0 6 chr5 195528687 195529000 -4101150 - AluY SINE Alu 0 311 1 371 234 81 0 chr5 195529151 195529262 -4100888 + L2 LINE L2 3150 3269 -3 702 220 0 0 chr5 195529536 195529668 -4100482 + FLAM_A SINE Alu 1 132 -1 1356 191 14 35 chr5 195530350 195530633 -4099517 - AluJo SINE Alu -30 282 6 200 227 107 27 chr5 195530646 195530721 -4099429 - MIR SINE MIR -84 124 44 526 307 46 50 chr5 195530950 195531230 -4098920 - MER102a DNA MER1_type -36 294 27 261 250 45 11 chr5 195531568 195531656 -4098494 + MIR SINE MIR 66 156 -106 196 232 125 0 chr5 195531693 195531749 -4098401 - L2 LINE L2 -54 3218 3156 334 242 50 96 chr5 195532424 195532643 -4097507 - L2 LINE L2 -35 3237 3029 449 34 17 0 chr5 195533986 195534045 -4096105 + (CCG)n Simple_repeat Simple_repeat 3 62 0 266 259 24 35 chr5 195534379 195534464 -4095686 - MIR SINE MIR -71 191 108 21 71 0 0 chr5 195534749 195534791 -4095359 + AT_rich Low_complexity Low_complexity 1 42 0 2156 312 85 30 chr5 195534915 195535438 -4094712 + ERVL LTR ERVL 2165 2657 -3107 2179 105 7 10 chr5 195535438 195535742 -4094408 - AluSx SINE Alu -9 303 1 2156 312 85 30 chr5 195535742 195536084 -4094066 + ERVL LTR ERVL 2657 2979 -2785 2048 105 22 0 chr5 195536084 195536410 -4093740 - AluSg SINE Alu 0 332 1 2156 312 85 30 chr5 195536410 195537245 -4092905 + ERVL LTR ERVL 2979 4052 -1712 298 295 77 32 chr5 195537341 195537497 -4092653 + ERVL LTR ERVL 4196 4358 -1406 725 297 137 7 chr5 195537497 195537797 -4092353 - MLT1J2 LTR MaLR 0 450 112 751 215 124 17 chr5 195537830 195538063 -4092087 - L1ME1 LINE L1 -166 6000 5743 275 257 0 0 chr5 195538066 195538140 -4092010 + Charlie2a DNA MER1_type 1585 1658 -1204 1494 178 48 38 chr5 195538148 195538441 -4091709 + AluJo SINE Alu 1 296 -16 1779 168 9 25 chr5 195538443 195538758 -4091392 + AluJo SINE Alu 3 312 0 525 291 0 0 chr5 195538853 195538970 -4091180 + MER45A DNA AcHobo 1 117 -61 6656 73 46 22 chr5 195538973 195539905 -4090245 - SVA Other Other 0 1386 433 2471 60 13 0 chr5 195539922 195540224 -4089926 - AluY SINE Alu -5 306 1 351 164 55 0 chr5 195540224 195540297 -4089853 + MER45A DNA AcHobo 97 173 -5 2054 85 0 0 chr5 195540396 195540642 -4089508 - AluSx SINE Alu -17 295 50 7644 63 12 2 chr5 195540643 195541640 -4088510 + LTR13 LTR ERVK 1 1007 0 350 143 0 0 chr5 195541640 195541689 -4088461 - AluSx SINE Alu -249 54 6 270 212 26 88 chr5 195543796 195543909 -4086241 - L1MC5 LINE L1 -34 7927 7822 2430 71 10 0 chr5 195543910 195544205 -4085945 - AluY SINE Alu -13 298 1 506 252 0 0 chr5 195544210 195544325 -4085825 - FLAM_A SINE Alu -18 124 10 2360 104 0 0 chr5 195544344 195544642 -4085508 - AluSx SINE Alu -13 299 2 414 291 18 30 chr5 195544999 195545164 -4084986 + MER5A DNA MER1_type 27 189 0 2421 102 0 3 chr5 195545287 195545600 -4084550 - AluSx SINE Alu 0 312 1 528 255 96 11 chr5 195545839 195545967 -4084183 + MIR SINE MIR 29 179 -83 2119 149 0 0 chr5 195545967 195546268 -4083882 + AluSx SINE Alu 1 301 -11 528 255 96 11 chr5 195546268 195546327 -4083823 + MIR SINE MIR 179 232 -30 1130 135 0 0 chr5 195546415 195546571 -4083579 + AluSg/x SINE Alu 137 292 -18 1107 155 17 0 chr5 195546638 195546812 -4083338 + AluSp SINE Alu 137 313 0 979 169 83 86 chr5 195547451 195547608 -4082542 - MLT1F LTR MaLR -22 520 363 2381 111 0 3 chr5 195547608 195547915 -4082235 + AluSx SINE Alu 1 306 -6 979 169 83 86 chr5 195547915 195548035 -4082115 - MLT1F LTR MaLR -179 363 244 532 252 35 0 chr5 195548027 195548142 -4082008 - MLT1F LTR MaLR -420 122 4 * 2417 94 0 0 chr5 195548286 195548585 -4081565 + AluY SINE Alu 1 299 -12 236 220 353 0 chr5 195549478 195549628 -4080522 + L2 LINE L2 2756 2958 -356 1856 181 106 125 chr5 195549646 195549881 -4080269 + MER97b DNA MER1_type? 10 248 -805 2130 117 0 0 chr5 195549881 195550189 -4079961 - AluSx SINE Alu 0 308 1 1856 181 106 125 chr5 195550189 195550374 -4079776 + MER97b DNA MER1_type? 248 435 -618 1681 92 146 31 chr5 195550374 195550635 -4079515 + AluSx SINE Alu 1 291 -21 1856 181 106 125 chr5 195550635 195550648 -4079502 + MER97b DNA MER1_type? 435 447 -606 2180 125 3 3 chr5 195550648 195550944 -4079206 + AluSg1 SINE Alu 1 296 -13 1856 181 106 125 chr5 195550944 195551079 -4079071 + MER97b DNA MER1_type? 447 583 -470 1952 161 0 16 chr5 195551079 195551396 -4078754 - AluJo SINE Alu 0 312 1 1856 181 106 125 chr5 195551396 195551664 -4078486 + MER97b DNA MER1_type? 583 834 -219 894 202 66 126 chr5 195551664 195551803 -4078347 - MER34 LTR ERV1 -15 527 381 837 132 0 29 chr5 195551803 195551939 -4078211 + FLAM_C SINE Alu 1 132 -1 894 202 66 126 chr5 195551939 195552112 -4078038 - MER34 LTR ERV1 -161 381 199 754 197 0 0 chr5 195552112 195552244 -4077906 - FLAM_A SINE Alu -1 132 1 894 202 66 126 chr5 195552244 195552255 -4077895 - MER34 LTR ERV1 -343 199 189 1917 150 28 0 chr5 195552255 195552541 -4077609 - AluJb SINE Alu -18 294 1 894 202 66 126 chr5 195552541 195552654 -4077496 - MER34 LTR ERV1 -353 189 167 2529 81 0 0 chr5 195552654 195552964 -4077186 + AluY SINE Alu 1 310 -1 894 202 66 126 chr5 195552964 195553122 -4077028 - MER34 LTR ERV1 -375 167 1 1950 166 0 0 chr5 195553143 195553438 -4076712 + AluJb SINE Alu 1 295 -17 2089 125 24 0 chr5 195553788 195554083 -4076067 - AluSq SINE Alu -11 302 1 4697 46 5 0 chr5 195554560 195555148 -4075002 - LTR10C LTR ERV1 0 591 1 2327 114 0 3 chr5 195555498 195555806 -4074344 - AluSx SINE Alu -5 307 1 563 175 12 44 chr5 195556217 195556306 -4073844 - Charlie5 DNA MER1_type 0 2585 2502 2544 62 0 13 chr5 195556306 195556611 -4073539 + AluY SINE Alu 2 302 -9 563 175 12 44 chr5 195556611 195556681 -4073469 - Charlie5 DNA MER1_type -83 2502 2431 2253 119 0 3 chr5 195556681 195556991 -4073159 - AluSq SINE Alu -4 309 1 1161 100 6 47 chr5 195556999 195557169 -4072981 - FRAM SINE Alu -16 160 1 2102 111 43 0 chr5 195557175 195557454 -4072696 - AluSc SINE Alu -18 291 1 2403 92 0 0 chr5 195557623 195557915 -4072235 - AluSc SINE Alu -13 296 5 367 291 64 0 chr5 195557928 195558038 -4072112 - Charlie8 DNA MER1_type -2297 120 4 2380 96 6 10 chr5 195558156 195558470 -4071680 - AluSp SINE Alu 0 313 1 2178 103 23 0 chr5 195558497 195558799 -4071351 + AluSx SINE Alu 1 309 -3 1238 162 31 22 chr5 195558810 195559032 -4071118 + AluJo SINE Alu 1 224 -88 2400 84 10 0 chr5 195559100 195559396 -4070754 - AluSp SINE Alu -14 299 1 1054 237 116 68 chr5 195559454 195559557 -4070593 + MLT1D LTR MaLR 1 98 -407 1895 168 3 3 chr5 195559557 195559848 -4070302 - AluJb SINE Alu -21 291 1 1054 237 116 68 chr5 195559848 195560217 -4069933 + MLT1D LTR MaLR 98 496 -9 1957 125 56 0 chr5 195560361 195560378 -4069772 - AluSx SINE Alu -8 304 289 450 36 0 0 chr5 195560378 195560434 -4069716 + (TA)n Simple_repeat Simple_repeat 2 57 0 1957 125 56 0 chr5 195560434 195560704 -4069446 - AluSx SINE Alu -23 289 1 492 267 47 21 chr5 195560707 195560898 -4069252 - MIR SINE MIR 0 262 67 2333 100 0 0 chr5 195561394 195561693 -4068457 - AluSg SINE Alu -11 299 1 222 207 20 218 chr5 195561694 195561767 -4068383 - MER5C DNA MER1_type -37 287 201 894 138 48 12 chr5 195561767 195561934 -4068216 + L1PA10 LINE L1 5993 6165 -3 1890 118 71 4 chr5 195561943 195562223 -4067927 + AluSx SINE Alu 11 309 -3 222 207 20 218 chr5 195562223 195562312 -4067838 - MER5C DNA MER1_type -132 192 87 2523 68 0 0 chr5 195562312 195562607 -4067543 + AluY SINE Alu 1 295 -16 222 207 20 218 chr5 195562607 195562702 -4067448 - MER5C DNA MER1_type -237 87 104 1502 188 58 4 chr5 195562702 195562978 -4067172 - AluJb SINE Alu -19 293 3 222 207 20 218 chr5 195562978 195563066 -4067084 - MER5C DNA MER1_type -219 105 1 1900 166 40 70 chr5 195563293 195563496 -4066654 + MSTB1 LTR MaLR 1 208 -224 2101 134 0 10 chr5 195563496 195563803 -4066347 + AluSx SINE Alu 1 304 -8 1900 166 40 70 chr5 195563803 195564044 -4066106 + MSTB1 LTR MaLR 208 432 0 416 286 23 29 chr5 195564538 195564713 -4065437 + GA-rich Low_complexity Low_complexity 1 174 0 4539 84 40 13 chr5 195565300 195565603 -4064547 - L1PB1 LINE L1 -63 6088 5795 342 67 0 0 chr5 195565603 195565648 -4064502 + (TA)n Simple_repeat Simple_repeat 2 46 0 4539 84 40 13 chr5 195565648 195566024 -4064126 - L1PB1 LINE L1 -356 5795 5391 1561 161 27 0 chr5 195566024 195566284 -4063866 + MER73 LTR ERVL 378 644 0 305 239 0 44 chr5 195566287 195566400 -4063750 + L1ME3A LINE L1 6063 6170 0 2339 111 0 0 chr5 195566543 195566841 -4063309 - AluSx SINE Alu -14 298 1 1695 118 9 121 chr5 195566860 195567200 -4062950 - AluJb SINE Alu 0 302 1 409 214 14 0 chr5 195567345 195567431 -4062719 + L1MDb LINE L1 18 232 -6311 2234 131 0 6 chr5 195567461 195567775 -4062375 + AluSx SINE Alu 1 312 0 1480 234 28 32 chr5 195567781 195568091 -4062059 + L1M4 LINE L1 3060 3369 -2777 1304 211 74 60 chr5 195568091 195568589 -4061561 - LTR22 LTR ERVK -4 505 1 1480 234 28 32 chr5 195568589 195568778 -4061372 + L1M4 LINE L1 3369 3557 -2589 2042 112 17 7 chr5 195568778 195569074 -4061076 - AluSp SINE Alu -14 299 1 4191 188 18 22 chr5 195569078 195569606 -4060544 - L1MB3 LINE L1 -45 6138 5609 2228 138 0 0 chr5 195569606 195569911 -4060239 - AluJb SINE Alu -7 305 1 4191 188 18 22 chr5 195569911 195570994 -4059156 - L1MB3 LINE L1 -574 5609 4536 552 194 65 21 chr5 195571005 195571191 -4058959 - L1MB3 LINE L1 -2647 3499 3306 201 39 0 0 chr5 195571223 195571249 -4058901 + (TG)n Simple_repeat Simple_repeat 1 26 0 207 405 0 0 chr5 195571446 195571520 -4058630 + MIR SINE MIR 35 108 -100 1827 136 3 65 chr5 195572586 195572909 -4057241 + AluSx SINE Alu 1 303 -9 340 297 28 113 chr5 195574193 195574476 -4055674 - Charlie8 DNA MER1_type -2158 259 1 2243 111 7 3 chr5 195576695 195576992 -4053158 + AluSx SINE Alu 4 301 -11 2246 87 0 48 chr5 195576992 195577304 -4052846 + AluY SINE Alu 1 297 -14 1544 106 59 8 chr5 195577377 195577631 -4052519 - L1MC3 LINE L1 -184 7601 7335 2403 78 7 0 chr5 195577631 195577949 -4052201 + AluSx SINE Alu 1 320 0 406 266 153 39 chr5 195578292 195578521 -4051629 + MIR SINE MIR 8 262 0 454 311 72 30 chr5 195578729 195578908 -4051242 - MIR SINE MIR -1 261 68 2659 39 7 3 chr5 195578908 195579217 -4050933 - AluY SINE Alu 0 311 2 454 311 72 30 chr5 195579217 195579272 -4050878 - MIR SINE MIR -194 68 17 184 225 238 0 chr5 195579434 195579514 -4050636 + MIR SINE MIR 30 128 -80 29 70 0 0 chr5 195579621 195579678 -4050472 + GC_rich Low_complexity Low_complexity 1 57 0 255 291 38 0 chr5 195580879 195580958 -4049192 + MIR SINE MIR 149 230 -32 238 167 250 0 chr5 195581210 195581270 -4048880 + MIR SINE MIR 23 97 -165 233 357 91 15 chr5 195582113 195582312 -4047838 - L2 LINE L2 -243 3029 2816 2262 96 0 0 chr5 195582444 195582746 -4047404 - AluSg SINE Alu 0 302 1 482 274 126 16 chr5 195584246 195584501 -4045649 - L2 LINE L2 -584 2730 2448 2290 301 153 25 chr5 195584517 195586288 -4043862 + L2 LINE L2 800 2795 -519 613 331 86 8 chr5 195586366 195586728 -4043422 + L2 LINE L2 2919 3308 -5 916 227 50 36 chr5 195589651 195589928 -4040222 - MER102a DNA MER1_type -26 304 24 220 209 0 0 chr5 195590624 195590667 -4039483 + MER91 DNA MER1_type 1 43 -97 431 292 112 21 chr5 195591432 195591665 -4038485 - MIR SINE MIR 0 262 9 1490 126 114 27 chr5 195592200 195592463 -4037687 - AluSg SINE Alu -11 299 14 1367 109 0 21 chr5 195592865 195593091 -4037059 + AluSq SINE Alu 95 316 0 1003 185 40 22 chr5 195593151 195593373 -4036777 + L1MCb LINE L1 509 734 -5311 2182 137 0 0 chr5 195593376 195593676 -4036474 - AluSx SINE Alu -12 300 1 5323 244 21 38 chr5 195593679 195593809 -4036341 - L1M4c LINE L1 -2298 4084 3953 1756 156 55 27 chr5 195593809 195594137 -4036013 + MER1B DNA MER1_type 1 337 0 5323 244 21 38 chr5 195594137 195595856 -4034294 - L1M4c LINE L1 -2429 3953 2310 1618 226 47 23 chr5 195595956 195596268 -4033882 - L1M4 LINE L1 -3569 2813 2510 1629 198 10 7 chr5 195596268 195596571 -4033579 - AluJo SINE Alu -8 304 1 1618 226 47 23 chr5 195596571 195597034 -4033116 - L1M4 LINE L1 -3872 2510 2022 1623 155 36 12 chr5 195597035 195597286 -4032864 - AluSx SINE Alu -16 296 40 401 102 0 0 chr5 195597291 195597350 -4032800 + Alu SINE Alu 1 59 -241 538 331 18 52 chr5 195597357 195597683 -4032467 - L1M4 LINE L1 -5572 731 417 877 281 109 3 chr5 195597699 195597997 -4032153 - L1M4c LINE L1 -609 2134 1596 2254 89 3 3 chr5 195598144 195598456 -4031694 - AluSp SINE Alu 0 312 1 1888 166 0 17 chr5 195598990 195599291 -4030859 - AluJo SINE Alu -14 298 3 2417 58 27 10 chr5 195600567 195600860 -4029290 - AluY SINE Alu -13 298 1 358 156 27 0 chr5 195600944 195601027 -4029123 + AluJ/FLAM SINE Alu 1 66 -236 3562 218 97 37 chr5 195601130 195601630 -4028520 - L1MEc LINE L1 -4106 2320 1851 1868 152 20 3 chr5 195601630 195601927 -4028223 - AluJb SINE Alu -10 302 1 3562 218 97 37 chr5 195601927 195602105 -4028045 - L1MEc LINE L1 -4575 1851 1685 2561 72 0 3 chr5 195602105 195602412 -4027738 - AluY SINE Alu -5 306 1 3562 218 97 37 chr5 195602412 195602996 -4027154 - L1MEc LINE L1 -4741 1685 982 1817 157 0 3 chr5 195603014 195603300 -4026850 - AluSx SINE Alu 0 312 28 325 346 50 0 chr5 195603307 195603466 -4026684 - L2 LINE L2 -628 2686 2520 229 290 20 40 chr5 195603739 195603839 -4026311 + L2 LINE L2 1812 1909 -1405 723 296 129 19 chr5 195604304 195604669 -4025481 + MLT1J2 LTR MaLR 46 450 0 1974 106 16 7 chr5 195605076 195605379 -4024771 + L1PB1 LINE L1 5844 6149 -2 331 232 14 0 chr5 195605536 195605605 -4024545 + Charlie8 DNA MER1_type 1353 1422 -995 313 143 0 63 chr5 195605654 195605717 -4024433 - MER2 DNA MER2_type -286 59 1 2301 185 58 82 chr5 195605720 195605819 -4024331 - L1 LINE L1 -2364 3782 3682 2223 134 0 3 chr5 195605819 195606132 -4024018 - AluSx SINE Alu 0 312 1 2301 185 58 82 chr5 195606132 195606160 -4023990 - L1 LINE L1 -2464 3682 3655 2498 100 8 0 chr5 195606160 195606519 -4023631 - THE1B LTR MaLR -2 362 1 2301 185 58 82 chr5 195606519 195607007 -4023143 - L1 LINE L1 -2491 3655 3191 1799 169 7 14 chr5 195607007 195607303 -4022847 + AluJo SINE Alu 1 294 -18 2301 185 58 82 chr5 195607303 195607560 -4022590 - L1 LINE L1 -2955 3191 2929 237 33 0 0 chr5 195808339 195808369 -3821781 + (A)n Simple_repeat Simple_repeat 1 30 0 228 190 138 0 chr5 195809797 195809855 -3820295 + L1MB4 LINE L1 6111 6176 -4 591 140 0 0 chr5 195810805 195810905 -3819245 - L1PA8 LINE L1 0 6172 6073 399 194 0 0 chr5 195810905 195810972 -3819178 + AluS SINE Alu 228 294 -8 1748 164 3 0 chr5 195813739 195814026 -3816124 + AluSp SINE Alu 1 288 -25 203 283 131 28 chr5 195815358 195815503 -3814647 - MIR SINE MIR -56 206 47 1788 149 3 0 chr5 195818761 195819050 -3811100 + AluSp SINE Alu 11 300 -13 1912 138 10 0 chr5 195820150 195820448 -3809702 + AluSp SINE Alu 3 303 -10 182 290 131 28 chr5 195820683 195820828 -3809322 - MIR SINE MIR -56 206 47 1967 130 10 0 chr5 195822696 195823004 -3807146 + AluSp SINE Alu 3 313 0 2292 97 0 3 chr5 195829133 195829443 -3800707 + AluSx SINE Alu 1 309 -3 1692 166 0 27 chr5 195829737 195830038 -3800112 + AluJo SINE Alu 1 293 -19 207 339 15 62 chr5 195831253 195831448 -3798702 - L2 LINE L2 -338 2976 2791 306 240 240 8 chr5 195831449 195831570 -3798580 - MER46C DNA MER2_type -188 150 2 324 282 0 45 chr5 195831603 195831694 -3798456 - L1ME LINE L1 -473 5648 5561 2331 77 0 0 chr5 195831694 195831992 -3798158 + AluY SINE Alu 1 298 -13 324 282 0 45 chr5 195831992 195832010 -3798140 - L1ME LINE L1 -560 5561 5544 200 163 23 0 chr5 195832084 195832127 -3798023 + CT-rich Low_complexity Low_complexity 2 45 0 238 233 47 12 chr5 195832160 195832246 -3797904 - L1ME LINE L1 -1197 4949 4861 1681 171 3 10 chr5 195832373 195832666 -3797484 + AluJb SINE Alu 1 291 -21 1216 254 101 85 chr5 195833274 195834148 -3796002 - L1MC4 LINE L1 -24 8018 7131 554 152 0 0 chr5 195834468 195834547 -3795603 + AluJ/FLAM SINE Alu 13 91 -221 444 37 0 0 chr5 195834549 195834603 -3795547 + (CA)n Simple_repeat Simple_repeat 2 55 0 917 185 0 0 chr5 195834607 195834769 -3795381 + AluJb SINE Alu 139 300 -12 2309 98 0 0 chr5 195835288 195835594 -3794556 + AluSc SINE Alu 1 306 -3 1236 191 131 15 chr5 195835607 195835874 -3794276 + AluJo SINE Alu 2 299 -3 1048 77 0 0 chr5 195836305 195836435 -3793715 + AluSg SINE Alu 1 130 -180 1524 199 33 3 chr5 195836583 195836885 -3793265 - MER2 DNA MER2_type 0 345 35 709 124 0 0 chr5 195837888 195837985 -3792165 + AluSc SINE Alu 2 98 -211 2245 76 0 52 chr5 195838036 195838364 -3791786 + AluY SINE Alu 1 311 0 1982 137 0 0 chr5 195839118 195839411 -3790739 - AluSx SINE Alu -19 293 1 628 230 86 8 chr5 195839411 195839627 -3790523 - L1 LINE L1 -750 5396 5174 230 248 87 54 chr5 195840498 195840647 -3789503 - HAL1b LINE L1 -884 464 311 1413 90 35 5 chr5 195840654 195840854 -3789296 + AluSq SINE Alu 1 206 -107 905 102 0 0 chr5 195840856 195840974 -3789176 - AluSq/x SINE Alu -194 118 1 22 0 0 0 chr5 195840987 195841009 -3789141 + AT_rich Low_complexity Low_complexity 1 22 0 1962 135 7 0 chr5 195841192 195841488 -3788662 + AluSx SINE Alu 1 298 -14 1820 131 37 3 chr5 195841640 195841938 -3788212 + AluSq SINE Alu 1 308 -5 2178 95 0 3 chr5 195841940 195842236 -3787914 + AluSg SINE Alu 1 295 -15 2232 97 0 0 chr5 195842451 195842759 -3787391 - AluSc SINE Alu -1 308 1 2190 98 0 3 chr5 195842973 195843278 -3786872 - AluSp SINE Alu -9 304 1 1443 97 0 19 chr5 195843722 195843928 -3786222 + AluSx SINE Alu 1 202 -110 1543 236 54 24 chr5 195844221 195844721 -3785429 - L1 LINE L1 -3328 2818 2304 3679 96 80 4 chr5 195845159 195845712 -3784438 + LTR61 LTR ERV1 1 595 0 234 237 5 98 chr5 195845889 195846083 -3784067 + (GGGTG)n Simple_repeat Simple_repeat 1 176 0 234 294 5 48 chr5 195846645 195846832 -3783318 + (GGGTG)n Simple_repeat Simple_repeat 1 179 0 * 285 294 6 44 chr5 195846693 195846853 -3783297 + (CGGGG)n Simple_repeat Simple_repeat 4 157 0 669 196 137 51 chr5 195847302 195847557 -3782593 - LOR1b LTR ERV1 -184 277 1 348 102 0 0 chr5 195849344 195849393 -3780757 + Alu SINE Alu 1 49 -254 2363 56 0 0 chr5 195849425 195849753 -3780397 - AluY SINE Alu 0 328 1 3276 103 0 0 chr5 195849759 195850204 -3779946 - L1PA13 LINE L1 -3 6160 5716 247 219 0 0 chr5 195850731 195850772 -3779378 + AluJ/monomer SINE Alu 1 41 -259 * 596 130 0 20 chr5 195850760 195850860 -3779290 + LTR15 LTR ERV1 390 487 -6 1291 64 6 12 chr5 195850962 195851135 -3779015 + L1PA13 LINE L1 5987 6158 -5 2287 56 0 0 chr5 195851143 195851456 -3778694 - AluY SINE Alu 0 313 1 5168 136 44 32 chr5 195852815 195853775 -3776375 - L1MA8 LINE L1 -1 6290 5310 2111 108 3 0 chr5 195853775 195854080 -3776070 - AluSc SINE Alu -3 306 1 5168 136 44 32 chr5 195854080 195854333 -3775817 - L1MA8 LINE L1 -981 5310 5062 1193 132 73 18 chr5 195854333 195854553 -3775597 + AluJb SINE Alu 64 295 -17 1352 177 107 3 chr5 195854553 195854853 -3775297 - L1MA8 LINE L1 -1924 4222 3892 2041 153 124 3 chr5 195854859 195855238 -3774912 + MSTA LTR MaLR 3 427 -1 5232 213 76 4 chr5 195855240 195856309 -3773841 + MSTA-int LTR MaLR 2 1147 -504 1035 189 66 0 chr5 195856310 195856506 -3773644 - MER41C LTR ERV1 0 554 346 1175 198 5 18 chr5 195856506 195856723 -3773427 - MER41C LTR ERV1 -340 214 1 5931 153 40 0 chr5 195856723 195857683 -3772467 - MER41C-int LTR ERV1 0 7756 6759 180 284 40 27 chr5 195858540 195858614 -3771536 - L2 LINE L2 0 3272 3198 27 0 0 0 chr5 195860918 195860945 -3769205 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 195861817 195861845 -3768305 + AT_rich Low_complexity Low_complexity 1 28 0 1280 227 27 27 chr5 195861982 195862277 -3767873 + MER2 DNA MER2_type 48 342 -3 3803 27 0 2 chr5 195863090 195863531 -3766619 - L1PA4 LINE L1 -3 6152 5713 2221 88 10 0 chr5 195863907 195864212 -3765938 + AluSq SINE Alu 1 308 -5 2405 62 0 0 chr5 195864282 195864591 -3765559 - AluY SINE Alu -2 309 1 343 179 0 0 chr5 195864636 195864703 -3765447 - AluJo SINE Alu -30 272 206 457 152 238 29 chr5 195864703 195864808 -3765342 - AluJo SINE Alu -161 151 25 1142 255 46 39 chr5 195870738 195871093 -3759057 - MER21B LTR ERV1 -74 531 131 267 264 40 72 chr5 195871104 195871229 -3758921 - MER77 LTR ERV1 -405 200 80 1235 233 71 58 chr5 195873409 195873860 -3756290 + MLT1C LTR MaLR 11 467 0 1657 223 0 0 chr5 195874092 195874420 -3755730 + L1MCa LINE L1 6 333 -6093 1063 32 0 0 chr5 195874420 195874543 -3755607 + AluY SINE Alu 1 123 -188 279 0 0 0 chr5 195874545 195874576 -3755574 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 2702 191 50 0 chr5 195874576 195875078 -3755072 + L1MCa LINE L1 327 853 -5573 910 187 47 5 chr5 195875098 195875312 -3754838 + L1MCa LINE L1 2105 2327 -4099 1190 268 106 57 chr5 195875444 195875955 -3754195 + L1MB4 LINE L1 5 540 -5844 * 2386 241 51 27 chr5 195875948 195876714 -3753436 + L1MB4 LINE L1 3995 4778 -1604 3405 193 25 10 chr5 195876737 195877603 -3752547 + L1MB4 LINE L1 5323 6204 -212 1548 183 42 0 chr5 195878003 195878292 -3751858 - AluJo SINE Alu -11 301 1 500 233 33 0 chr5 195878803 195878923 -3751227 - FLAM_A SINE Alu -3 139 16 279 93 0 0 chr5 195878923 195878966 -3751184 + (TG)n Simple_repeat Simple_repeat 2 44 0 598 162 105 0 chr5 195878966 195879071 -3751079 - FLAM_C SINE Alu -26 117 2 1384 271 86 60 chr5 195881207 195882069 -3748081 + L1MC4 LINE L1 7136 8019 -23 2132 127 0 0 chr5 195882627 195882926 -3747224 + AluSx SINE Alu 1 299 -13 305 159 0 29 chr5 195883029 195883098 -3747052 + GA-rich Low_complexity Low_complexity 4 70 0 321 335 40 0 chr5 195883149 195883301 -3746849 + L1ME LINE L1 5513 5670 -451 337 206 0 0 chr5 195883367 195883430 -3746720 + MER46C DNA MER2_type 87 149 -189 255 346 38 27 chr5 195883441 195883626 -3746524 + L2 LINE L2 2791 2977 -337 1796 125 0 67 chr5 195884853 195885166 -3744984 - AluJb SINE Alu -20 292 1 2280 73 0 7 chr5 195885239 195885541 -3744609 - AluY SINE Alu -11 300 1 2388 173 26 94 chr5 195885569 195886168 -3743982 + LTR6A LTR ERV1 1 499 -65 2589 39 3 0 chr5 195886168 195886476 -3743674 - AluY SINE Alu -2 309 1 2388 173 26 94 chr5 195886476 195886538 -3743612 + LTR6A LTR ERV1 499 564 0 1429 176 17 10 chr5 195890456 195890745 -3739405 - AluJb SINE Alu -21 291 1 868 224 59 12 chr5 195892482 195892736 -3737414 - AluSg SINE Alu -44 266 1 235 273 180 31 chr5 195893090 195893251 -3736899 + MIR SINE MIR 25 209 -53 1783 154 3 0 chr5 195894899 195895185 -3734965 - AluJb SINE Alu -12 300 14 444 242 102 38 chr5 195897321 195897507 -3732643 - LOR1-int LTR ERV1 -2868 3730 3533 591 188 23 51 chr5 195897600 195897874 -3732276 - LOR1-int LTR ERV1 -3810 4310 2290 307 327 65 50 chr5 195897993 195898192 -3731958 - L1M4 LINE L1 -2368 3778 3577 407 253 68 76 chr5 195898516 195898765 -3731385 - HSATI Satellite Satellite -322 255 9 2183 108 0 3 chr5 195898969 195899274 -3730876 - AluSx SINE Alu -8 304 1 320 254 107 66 chr5 195899908 195900105 -3730045 + L1MCa LINE L1 1892 2096 -4330 955 308 96 8 chr5 195900579 195901092 -3729058 - MLT1G LTR MaLR -32 558 1 372 150 62 0 chr5 195901396 195901476 -3728674 - L1PA16 LINE L1 -2 6164 6080 4249 160 52 8 chr5 195901516 195902272 -3727878 - MER49 LTR ERV1 -39 884 96 194 231 0 0 chr5 195902932 195902971 -3727179 - MIR SINE MIR -135 73 35 338 312 28 78 chr5 195903191 195903408 -3726742 + L1MB5 LINE L1 5271 5476 -859 1575 231 152 26 chr5 195903415 195903925 -3726225 + L1MB5 LINE L1 5560 6143 -31 2401 49 0 26 chr5 195903925 195904231 -3725919 + AluY SINE Alu 1 298 -13 1575 231 152 26 chr5 195904231 195904261 -3725889 + L1MB5 LINE L1 6143 6168 -6 271 287 17 29 chr5 195905133 195905307 -3724843 + C-rich Low_complexity Low_complexity 2 173 0 342 155 24 12 chr5 195908137 195908221 -3721929 + G-rich Low_complexity Low_complexity 4 88 0 1123 204 109 0 chr5 195908708 195908993 -3721157 - LOR1a LTR ERV1 -180 317 2 199 153 0 14 chr5 195910445 195910486 -3719664 + MIR SINE MIR 100 140 -68 3612 124 46 19 chr5 195910510 195911075 -3719075 - LTR19B LTR ERV1 0 580 1 789 11 0 0 chr5 195911512 195911600 -3718550 - L1PA7 LINE L1 -581 5591 5504 4423 50 14 12 chr5 195911600 195912161 -3717989 + L1PA7 LINE L1 5588 6154 0 205 265 5 74 chr5 195912806 195912995 -3717155 + (CGGGG)n Simple_repeat Simple_repeat 4 179 0 939 217 97 47 chr5 195913426 195913726 -3716424 - LOR1a LTR ERV1 -182 315 1 996 94 0 0 chr5 195914481 195914608 -3715542 - AluSq/x SINE Alu -185 127 1 22 0 0 0 chr5 195914626 195914648 -3715502 + AT_rich Low_complexity Low_complexity 1 22 0 1921 125 34 0 chr5 195914834 195915130 -3715020 + AluSx SINE Alu 1 306 -6 1876 136 0 3 chr5 195915284 195915579 -3714571 + AluSq SINE Alu 1 294 -19 2141 100 0 7 chr5 195915787 195916088 -3714062 - AluSc SINE Alu -10 299 1 2034 117 0 3 chr5 195916302 195916600 -3713550 - AluSp SINE Alu -13 300 4 230 113 0 18 chr5 195917043 195917290 -3712860 + AluSx SINE Alu 1 299 -3 1736 248 59 19 chr5 195917439 195918079 -3712071 - L1 LINE L1 -3169 2977 2312 2349 74 0 10 chr5 195918458 195918770 -3711380 + AluY SINE Alu 1 309 -2 1133 200 80 40 chr5 195918778 195919010 -3711140 - L1M4 LINE L1 -1430 4716 4466 2307 91 3 0 chr5 195919010 195919318 -3710832 + AluSg SINE Alu 1 309 -1 1133 200 80 40 chr5 195919318 195919410 -3710740 - L1M4 LINE L1 -1680 4466 4379 2108 151 23 60 chr5 195919410 195919643 -3710507 - MSTA LTR MaLR 0 428 188 2035 136 0 0 chr5 195919643 195919937 -3710213 - AluSx SINE Alu -18 294 1 1913 128 20 3 chr5 195919944 195920242 -3709908 - AluSx SINE Alu -9 303 1 2108 151 23 60 chr5 195920242 195920385 -3709765 - MSTA LTR MaLR -246 182 58 258 135 19 0 chr5 195920385 195920437 -3709713 - MSTA LTR MaLR -318 110 58 271 135 19 0 chr5 195920437 195920489 -3709661 - MSTA LTR MaLR -318 110 58 275 115 19 0 chr5 195920489 195920541 -3709609 - MSTA LTR MaLR -318 110 58 228 154 19 0 chr5 195920541 195920593 -3709557 - MSTA LTR MaLR -318 110 58 284 115 19 0 chr5 195920593 195920645 -3709505 - MSTA LTR MaLR -318 110 58 253 154 19 0 chr5 195920645 195920697 -3709453 - MSTA LTR MaLR -318 110 58 273 125 62 0 chr5 195920785 195920849 -3709301 - MSTA LTR MaLR -303 125 58 296 96 19 0 chr5 195920849 195920901 -3709249 - MSTA LTR MaLR -318 110 58 395 167 14 0 chr5 195920901 195920973 -3709177 - MSTA LTR MaLR -318 110 38 9809 141 37 24 chr5 195920975 195922589 -3707561 - MSTA-int LTR MaLR -16 1635 1 2394 139 39 49 chr5 195922589 195922646 -3707504 - MSTA LTR MaLR 0 428 372 1905 138 6 16 chr5 195922646 195922958 -3707192 - AluSx SINE Alu -2 310 2 2394 139 39 49 chr5 195922958 195923332 -3706818 - MSTA LTR MaLR -56 372 1 5082 208 39 42 chr5 195923332 195923429 -3706721 - L1M4 LINE L1 -1765 4381 4285 1999 128 3 0 chr5 195923429 195923719 -3706431 - AluSx SINE Alu -21 291 1 5082 208 39 42 chr5 195923719 195925021 -3705129 - L1M4 LINE L1 -1861 4285 2987 386 147 73 176 chr5 195925055 195925112 -3705038 + Charlie2 DNA MER1_type 2636 2697 -165 733 186 0 8 chr5 195925112 195925236 -3704914 + FLAM_A SINE Alu 1 123 -10 386 147 73 176 chr5 195925236 195925263 -3704887 + Charlie2 DNA MER1_type 2697 2725 -137 1973 122 7 0 chr5 195925263 195925558 -3704592 + AluJb SINE Alu 8 304 -8 386 147 73 176 chr5 195925558 195925717 -3704433 + Charlie2 DNA MER1_type 2725 2855 -7 2984 185 39 53 chr5 195926865 195927380 -3702770 + L1ME LINE L1 4254 4774 -1372 1002 179 12 0 chr5 195927380 195927542 -3702608 + FRAM SINE Alu 1 164 -2 2984 185 39 53 chr5 195927542 195927765 -3702385 + L1ME LINE L1 4774 4998 -1148 5637 104 40 21 chr5 195927765 195928670 -3701480 + SVA Other Other 456 1377 -9 2984 185 39 53 chr5 195928670 195928716 -3701434 + L1ME LINE L1 4998 5030 -1116 2043 129 0 0 chr5 195928716 195929010 -3701140 + AluSg SINE Alu 1 294 -16 2984 185 39 53 chr5 195929010 195929060 -3701090 + L1ME LINE L1 5030 5079 -1067 3220 110 5 0 chr5 195929060 195929506 -3700644 + MER83 LTR ERV1 1 448 0 18720 149 25 14 chr5 195929506 195931454 -3698696 + MER83-int LTR ERV1 12 2007 -2278 2014 113 14 0 chr5 195931454 195931746 -3698404 - AluSx SINE Alu -16 296 1 18720 149 25 14 chr5 195931746 195932781 -3697369 + MER83-int LTR ERV1 2007 3029 -1256 2605 120 15 15 chr5 195932775 195933166 -3696984 + MER83-int LTR ERV1 3877 4267 -18 * 3140 116 18 0 chr5 195933174 195933614 -3696536 + MER83 LTR ERV1 1 448 0 1174 202 31 9 chr5 195933644 195933994 -3696156 + L1ME LINE L1 5120 5480 -686 864 175 18 29 chr5 195934011 195934182 -3695968 + MER58A DNA MER1_type 43 211 -13 2837 97 5 0 chr5 195934236 195934618 -3695532 - pTR5 LTR ERV1 -2046 392 9 19270 45 11 2 chr5 195934718 195937122 -3693028 + L1P LINE L1 1383 3809 -2337 429 134 110 12 chr5 195937222 195937304 -3692846 + MLT1C LTR MaLR 378 467 0 2305 131 106 7 chr5 195937434 195937806 -3692344 - MER65A LTR ERV1 0 445 28 2275 80 3 7 chr5 195937806 195938105 -3692045 - AluSg SINE Alu -12 298 1 2305 131 106 7 chr5 195938105 195938137 -3692013 - MER65A LTR ERV1 -417 28 1 384 40 0 0 chr5 195938203 195938253 -3691897 + (TG)n Simple_repeat Simple_repeat 2 51 0 890 125 83 0 chr5 195938254 195938398 -3691752 - AluSg/x SINE Alu -28 282 127 7391 43 9 0 chr5 195938400 195939573 -3690577 - L1PA7 LINE L1 -1 6153 4974 646 281 84 70 chr5 195939675 195939943 -3690207 + L1MC4a LINE L1 5364 5627 -2181 2257 83 0 10 chr5 195939943 195940244 -3689906 + AluY SINE Alu 1 298 -13 646 281 84 70 chr5 195940244 195940533 -3689617 + L1MC4a LINE L1 5627 5929 -1879 1727 89 0 45 chr5 195941494 195941763 -3688387 + AluSg SINE Alu 1 257 -53 1056 123 95 20 chr5 195941893 195942146 -3688004 + L1MA2 LINE L1 6027 6298 -6 1962 107 24 27 chr5 195942147 195942445 -3687705 - AluSq SINE Alu -16 297 1 530 269 106 67 chr5 195942587 195943097 -3687053 - MER90 LTR ERV1 -2 612 83 287 304 83 17 chr5 195943120 195943301 -3686849 + L1MC4a LINE L1 5385 5580 -590 * 508 211 229 56 chr5 195943287 195943553 -3686597 - L1MC5 LINE L1 -36 7925 7614 917 154 6 0 chr5 195943553 195943709 -3686441 - FRAM SINE Alu -19 157 1 374 193 70 35 chr5 195943712 195943826 -3686324 - L1MC5 LINE L1 -339 7622 7505 343 267 189 21 chr5 195943813 195944094 -3686056 + L1MC4a LINE L1 5555 5882 -1926 * 2307 67 3 0 chr5 195945128 195945426 -3684724 + AluY SINE Alu 1 299 -12 28 48 0 0 chr5 195945930 195945972 -3684178 + AT_rich Low_complexity Low_complexity 1 42 0 1807 257 101 81 chr5 195946217 195947855 -3682295 + L1ME LINE L1 96 1795 -4285 1509 161 23 39 chr5 195947855 195948165 -3681985 - AluJb SINE Alu -1 311 7 1807 257 101 81 chr5 195948165 195948610 -3681540 + L1ME LINE L1 1795 2230 -3850 276 267 59 20 chr5 195948711 195948812 -3681338 + L1ME LINE L1 2640 2744 -3336 1884 264 73 41 chr5 195948875 195949571 -3680579 + L1ME LINE L1 2890 3682 -2398 1509 189 0 17 chr5 195949571 195949868 -3680282 - AluJo SINE Alu -18 294 3 1884 264 73 41 chr5 195949868 195950222 -3679928 + L1ME LINE L1 3682 4023 -2057 * 4128 164 55 3 chr5 195950219 195950897 -3679253 + L1M1 LINE L1 15 727 -6838 1293 107 0 0 chr5 195950911 195951088 -3679062 + AluSq SINE Alu 21 197 -116 275 163 0 0 chr5 195951350 195951393 -3678757 - MSTA LTR MaLR 0 428 386 269 73 0 24 chr5 195951405 195951446 -3678704 + L1P LINE L1 4970 5009 -1137 29 0 0 0 chr5 195951446 195951475 -3678675 + AT_rich Low_complexity Low_complexity 1 29 0 1767 155 128 7 chr5 195951477 195951825 -3678325 - MSTA LTR MaLR -27 401 14 1079 142 26 42 chr5 195951946 195952136 -3678014 - MER20 DNA MER1_type -31 188 2 633 204 18 0 chr5 195952380 195952493 -3677657 - MIR SINE MIR -32 230 116 437 131 0 0 chr5 195952739 195952800 -3677350 - AluJ/FRAM SINE Alu -20 292 232 508 162 11 11 chr5 195953124 195953234 -3676916 - L1MB7 LINE L1 -50 6130 6021 1649 131 65 4 chr5 195953326 195953601 -3676549 + AluSx SINE Alu 1 292 -20 2115 108 0 0 chr5 195953630 195953917 -3676233 + AluSx SINE Alu 1 287 -25 60 30 0 30 chr5 195954089 195954189 -3675961 + AT_rich Low_complexity Low_complexity 1 97 0 275 363 0 0 chr5 195954228 195954308 -3675842 + L2 LINE L2 3222 3301 -12 1747 112 39 0 chr5 195954349 195954607 -3675543 + L1PB1 LINE L1 5884 6151 0 24 0 0 0 chr5 195954607 195954631 -3675519 + AT_rich Low_complexity Low_complexity 1 24 0 377 266 162 81 chr5 195954842 195955113 -3675037 + LTR67 LTR ERVL 1 293 -264 2150 124 0 0 chr5 195955116 195955423 -3674727 - AluSx SINE Alu -5 307 1 225 250 25 0 chr5 195955449 195955529 -3674621 - L1M4 LINE L1 -1504 4642 4561 1920 111 4 14 chr5 195955579 195955858 -3674292 + AluSx SINE Alu 1 276 -36 1123 126 0 0 chr5 195956344 195956503 -3673647 - AluSg/x SINE Alu -19 293 135 419 265 98 23 chr5 195956559 195956633 -3673517 - MIR SINE MIR -87 175 108 2158 103 0 3 chr5 195956633 195956933 -3673217 + AluSg SINE Alu 2 300 -10 419 265 98 23 chr5 195956933 195956990 -3673160 - MIR SINE MIR -154 108 34 219 125 0 42 chr5 195958532 195958580 -3671570 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 1654 107 139 0 chr5 195958695 195958947 -3671203 - AluSq SINE Alu -16 287 1 1365 162 40 50 chr5 195958948 195959269 -3670881 + MER31-int LTR ERV1 3506 3823 -1113 4825 219 63 20 chr5 195959287 195960425 -3669725 + MER31-int LTR ERV1 3629 4815 -56 876 137 0 0 chr5 195960429 195960560 -3669590 + AluSq/x SINE Alu 3 133 -180 14880 87 8 13 chr5 195960580 195960963 -3669187 + L1P LINE L1 1657 2041 -4105 2062 117 0 13 chr5 195960963 195961270 -3668880 - AluSc SINE Alu -6 303 1 14880 87 8 13 chr5 195961270 195962435 -3667715 + L1P LINE L1 2041 3192 -2954 2263 90 0 13 chr5 195962435 195962736 -3667414 - AluY SINE Alu -14 297 1 14880 87 8 13 chr5 195962736 195963318 -3666832 + L1P LINE L1 3192 3776 -2370 288 0 0 0 chr5 195963855 195963887 -3666263 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1829 108 0 75 chr5 195963889 195964194 -3665956 - AluSx SINE Alu -28 284 3 606 218 30 12 chr5 195964443 195964608 -3665542 - L1M4 LINE L1 -1746 4400 4233 28 29 0 0 chr5 195964656 195964691 -3665459 + AT_rich Low_complexity Low_complexity 1 35 0 12877 41 15 1 chr5 195964691 195967003 -3663147 - L1PA5 LINE L1 -17 6137 3805 3929 161 27 9 chr5 195967306 195968057 -3662093 - L1MB4 LINE L1 -2 6178 5415 395 321 8 46 chr5 195968138 195968269 -3661881 + L2 LINE L2 3146 3271 -1 625 307 165 41 chr5 195968652 195969192 -3660958 - L2 LINE L2 -724 2590 1984 1747 148 3 7 chr5 195969215 195969505 -3660645 - AluJo SINE Alu -8 304 16 871 155 0 137 chr5 195969634 195969761 -3660389 + MER5A DNA MER1_type 1 144 -45 2685 96 70 0 chr5 195969761 195970159 -3659991 - MSTA LTR MaLR -2 426 1 871 155 0 137 chr5 195970159 195970187 -3659963 + MER5A DNA MER1_type 144 121 -68 2176 82 34 0 chr5 195970187 195970479 -3659671 - AluSx SINE Alu -10 302 1 871 155 0 137 chr5 195970479 195970541 -3659609 + MER5A DNA MER1_type 120 189 0 658 97 177 32 chr5 195970932 195971056 -3659094 - MER30 DNA MER1_type -88 142 1 551 259 38 8 chr5 195971086 195971235 -3658915 + L1MC/D LINE L1 5526 5681 -489 32 57 0 0 chr5 195971595 195971648 -3658502 + GC_rich Low_complexity Low_complexity 1 53 0 207 69 0 0 chr5 195971653 195971682 -3658468 + (CCG)n Simple_repeat Simple_repeat 3 31 0 31 44 0 0 chr5 195971803 195971848 -3658302 + GC_rich Low_complexity Low_complexity 1 45 0 23 33 0 0 chr5 195972013 195972043 -3658107 + GC_rich Low_complexity Low_complexity 1 30 0 345 244 39 0 chr5 195972566 195972644 -3657506 - L2 LINE L2 -17 3296 3216 230 220 0 0 chr5 195973139 195973189 -3656961 + L2 LINE L2 3263 3312 -1 262 261 161 28 chr5 195973264 195973482 -3656668 - L2 LINE L2 -927 2387 2141 26 0 0 0 chr5 195974245 195974271 -3655879 + AT_rich Low_complexity Low_complexity 1 26 0 409 296 0 0 chr5 195974513 195974628 -3655522 - L1ME4a LINE L1 -69 6052 1232 1274 151 112 4 chr5 195974817 195975049 -3655101 - Tigger2 DNA MER2_type -11 2707 2451 3660 152 24 80 chr5 195975080 195975904 -3654246 - Tigger2 DNA MER2_type -1940 778 1 652 214 86 37 chr5 195976008 195976195 -3653955 - L2 LINE L2 -3 3310 3115 1030 271 169 36 chr5 195976268 195976769 -3653381 - L2 LINE L2 0 3313 2880 2007 93 10 27 chr5 195976769 195977070 -3653080 - AluSc SINE Alu -13 296 1 1030 271 169 36 chr5 195977070 195977127 -3653023 - L2 LINE L2 -433 2880 2832 482 248 23 15 chr5 195977127 195977260 -3652890 + MER94 DNA DNA 1 134 0 1030 271 169 36 chr5 195977260 195977375 -3652775 - L2 LINE L2 -481 2832 2556 230 248 87 54 chr5 195977619 195977768 -3652382 - HAL1b LINE L1 -884 464 311 1334 99 35 10 chr5 195977775 195977976 -3652174 + AluSq SINE Alu 1 206 -107 905 102 0 0 chr5 195977978 195978096 -3652054 - AluSq/x SINE Alu -194 118 1 22 0 0 0 chr5 195978109 195978131 -3652019 + AT_rich Low_complexity Low_complexity 1 22 0 1970 135 7 0 chr5 195978314 195978611 -3651539 + AluSx SINE Alu 1 299 -13 1828 130 37 3 chr5 195978763 195979062 -3651088 + AluSq SINE Alu 1 309 -4 2257 89 0 3 chr5 195979065 195979367 -3650783 + AluSg SINE Alu 1 301 -9 2233 93 0 6 chr5 195979601 195979912 -3650238 - AluSc SINE Alu 0 309 1 2240 88 0 3 chr5 195980126 195980431 -3649719 - AluSp SINE Alu -9 304 1 1519 89 0 5 chr5 195980864 195981066 -3649084 + AluSx SINE Alu 1 201 -111 240 118 0 0 chr5 195981067 195981101 -3649049 + AluSx SINE Alu 257 290 -10 1492 234 131 16 chr5 195981273 195981846 -3648304 - L1 LINE L1 -3196 2950 2312 2257 84 0 13 chr5 195982226 195982537 -3647613 + AluY SINE Alu 1 307 -4 648 124 37 112 chr5 195982666 195982813 -3647337 - L1M4 LINE L1 -1544 4602 4478 2357 84 3 0 chr5 195982813 195983122 -3647028 + AluSg SINE Alu 1 310 0 648 124 37 112 chr5 195983122 195983216 -3646934 - L1M4 LINE L1 -1668 4478 4379 2160 140 23 60 chr5 195983216 195983449 -3646701 - MSTA LTR MaLR 0 428 188 2020 139 0 0 chr5 195983449 195983743 -3646407 - AluSx SINE Alu -18 294 1 1754 137 20 7 chr5 195983750 195984042 -3646108 - AluSx SINE Alu -16 296 1 2160 140 23 60 chr5 195984042 195984185 -3645965 - MSTA LTR MaLR -246 182 58 284 115 19 0 chr5 195984185 195984237 -3645913 - MSTA LTR MaLR -318 110 58 255 135 19 0 chr5 195984237 195984289 -3645861 - MSTA LTR MaLR -318 110 58 255 135 19 0 chr5 195984289 195984341 -3645809 - MSTA LTR MaLR -318 110 58 255 135 19 0 chr5 195984341 195984393 -3645757 - MSTA LTR MaLR -318 110 58 251 135 19 0 chr5 195984393 195984445 -3645705 - MSTA LTR MaLR -318 110 58 284 115 19 0 chr5 195984445 195984497 -3645653 - MSTA LTR MaLR -318 110 58 284 115 19 0 chr5 195984497 195984549 -3645601 - MSTA LTR MaLR -318 110 58 284 115 19 0 chr5 195984549 195984601 -3645549 - MSTA LTR MaLR -318 110 58 255 135 19 0 chr5 195984601 195984653 -3645497 - MSTA LTR MaLR -318 110 58 258 135 19 0 chr5 195984653 195984705 -3645445 - MSTA LTR MaLR -318 110 58 255 135 19 0 chr5 195984705 195984757 -3645393 - MSTA LTR MaLR -318 110 58 228 154 19 0 chr5 195984757 195984809 -3645341 - MSTA LTR MaLR -318 110 58 419 153 14 0 chr5 195984809 195984881 -3645269 - MSTA LTR MaLR -318 110 38 9609 144 36 30 chr5 195984883 195986245 -3643905 - MSTA-int LTR MaLR -16 1635 260 2454 37 0 3 chr5 195986245 195986540 -3643610 + AluY SINE Alu 1 294 -17 9609 144 36 30 chr5 195986540 195986802 -3643348 - MSTA-int LTR MaLR -1391 260 1 2357 142 39 46 chr5 195986802 195986858 -3643292 - MSTA LTR MaLR 0 428 373 1725 158 10 16 chr5 195986858 195987168 -3642982 - AluSx SINE Alu -3 309 2 2357 142 39 46 chr5 195987168 195987542 -3642608 - MSTA LTR MaLR -55 373 1 5173 207 29 52 chr5 195987542 195987639 -3642511 - L1M4 LINE L1 -1765 4381 4283 2072 110 3 0 chr5 195987639 195987929 -3642221 - AluSx SINE Alu -21 291 1 5173 207 29 52 chr5 195987929 195989259 -3640891 - L1M4 LINE L1 -1863 4283 2987 326 147 73 176 chr5 195989293 195989350 -3640800 + Charlie2 DNA MER1_type 2636 2697 -165 787 179 0 0 chr5 195989350 195989473 -3640677 + FLAM_A SINE Alu 1 123 -10 326 147 73 176 chr5 195989473 195989500 -3640650 + Charlie2 DNA MER1_type 2697 2725 -137 1975 125 7 0 chr5 195989500 195989795 -3640355 + AluJb SINE Alu 8 304 -8 326 147 73 176 chr5 195989795 195989954 -3640196 + Charlie2 DNA MER1_type 2725 2855 -7 2922 193 37 29 chr5 195991105 195991618 -3638532 + L1MB8 LINE L1 4254 4776 -1370 999 179 12 0 chr5 195991618 195991780 -3638370 + FRAM SINE Alu 1 164 -2 2922 193 37 29 chr5 195991780 195992002 -3638148 + L1MB8 LINE L1 4776 4995 -1151 5762 98 32 50 chr5 195992003 195993181 -3636969 + SVA Other Other 432 1377 -9 305 227 41 72 chr5 195993181 195993227 -3636923 + L1MB8 LINE L1 4986 5032 -1114 2013 136 0 0 chr5 195993227 195993521 -3636629 + AluSg SINE Alu 1 294 -16 305 227 41 72 chr5 195993521 195993571 -3636579 + L1MB8 LINE L1 5032 5079 -1067 3234 108 5 0 chr5 195993571 195994017 -3636133 + MER83 LTR ERV1 1 448 0 2518 168 49 7 chr5 195994017 195994427 -3635723 + MER83-int LTR ERV1 12 438 -4442 16096 141 16 16 chr5 195994453 195995932 -3634218 + MER83-int LTR ERV1 512 1991 -2294 2088 115 0 0 chr5 195995932 195996228 -3633922 - AluSx SINE Alu -16 296 1 16096 141 16 16 chr5 195996228 195997267 -3632883 + MER83-int LTR ERV1 1991 3029 -1256 2561 125 15 15 chr5 195997261 195997652 -3632498 + MER83-int LTR ERV1 3877 4267 -18 * 3078 129 11 0 chr5 195997660 195998103 -3632047 + MER83 LTR ERV1 1 448 0 1120 205 40 12 chr5 195998133 195998482 -3631668 + L1MB8 LINE L1 5120 5480 -686 947 162 6 29 chr5 195998499 195998672 -3631478 + MER58A DNA MER1_type 43 211 -13 7270 113 134 116 chr5 195998729 196000398 -3629752 - pTR5 LTR ERV1 0 2438 741 2542 202 35 23 chr5 196000405 196000648 -3629502 + L1MB8 LINE L1 5569 5808 -370 2266 80 3 7 chr5 196000648 196000950 -3629200 + AluY SINE Alu 1 301 -10 2542 202 35 23 chr5 196000950 196001309 -3628841 + L1MB8 LINE L1 5808 6178 0 901 315 133 54 chr5 196001717 196002933 -3627217 - L2 LINE L2 -14 3258 1952 753 191 127 50 chr5 196002964 196003042 -3627108 - MLT1F1 LTR MaLR 0 567 496 1174 192 82 80 chr5 196003042 196003406 -3626744 + MLT1A1 LTR MaLR 1 365 0 753 191 127 50 chr5 196003406 196003547 -3626603 - MLT1F1 LTR MaLR -71 496 331 * 1074 230 9 4 chr5 196003538 196003764 -3626386 - MLT1F1 LTR MaLR -340 227 1 318 342 40 7 chr5 196003764 196003913 -3626237 - L2 LINE L2 -1407 1907 1754 21 57 0 0 chr5 196206684 196206719 -3423431 + AT_rich Low_complexity Low_complexity 1 35 0 235 135 0 0 chr5 196206719 196206756 -3423394 - L1MB1 LINE L1 -6 6162 6126 237 33 0 0 chr5 196207341 196207371 -3422779 + (T)n Simple_repeat Simple_repeat 1 30 0 2033 88 0 72 chr5 196207556 196207876 -3422274 - AluSg SINE Alu -13 297 1 1579 232 89 114 chr5 196208181 196209033 -3421117 + L1MCb LINE L1 3 833 -5212 510 209 105 20 chr5 196209071 196209224 -3420926 + L1M4 LINE L1 3772 3937 -2209 2255 80 0 3 chr5 196209343 196209642 -3420508 - AluY SINE Alu -13 298 1 432 250 8 8 chr5 196209718 196209838 -3420312 + MLT1E3 LTR MaLR 55 174 -450 248 327 50 10 chr5 196209851 196209952 -3420198 - MIR SINE MIR -60 148 44 2061 121 3 0 chr5 196209971 196210276 -3419874 + AluSg SINE Alu 1 306 -4 1600 213 17 30 chr5 196210723 196211085 -3419065 - MLT1A1 LTR MaLR 0 365 9 1113 165 8 60 chr5 196211219 196211315 -3418835 - L1MA4 LINE L1 -35 6265 6165 2317 83 0 3 chr5 196211315 196211616 -3418534 - AluSc SINE Alu -9 300 1 1113 165 8 60 chr5 196211616 196211785 -3418365 - L1MA4 LINE L1 -135 6165 6014 2179 98 0 7 chr5 196212420 196212717 -3417433 + AluSg SINE Alu 1 295 -15 2224 100 0 0 chr5 196212719 196213029 -3417121 + AluSg SINE Alu 1 310 0 22 0 0 0 chr5 196213213 196213235 -3416915 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 45 chr5 196213258 196213284 -3416866 + AT_rich Low_complexity Low_complexity 1 26 -16 1970 94 47 0 chr5 196213284 196213560 -3416590 + AluSp SINE Alu 1 289 -24 29 0 0 45 chr5 196213560 196213577 -3416573 + AT_rich Low_complexity Low_complexity 26 42 0 287 113 16 0 chr5 196213577 196213639 -3416511 + (TA)n Simple_repeat Simple_repeat 2 64 0 1017 147 0 0 chr5 196213639 196213796 -3416354 - AluSq SINE Alu -25 288 132 25 0 0 0 chr5 196213796 196213821 -3416329 + AT_rich Low_complexity Low_complexity 1 25 0 2322 56 0 13 chr5 196214040 196214345 -3415805 + AluY SINE Alu 1 301 -10 183 313 134 0 chr5 196214963 196215030 -3415120 - L2 LINE L2 -64 3208 3133 1763 135 66 0 chr5 196215564 196215853 -3414297 + AluSx SINE Alu 1 308 -4 1582 162 0 42 chr5 196216384 196216692 -3413458 + AluJo SINE Alu 1 295 -17 539 282 87 45 chr5 196217166 196217698 -3412452 - L1MEc LINE L1 -5763 633 80 2081 105 3 10 chr5 196217699 196217993 -3412157 + AluSx SINE Alu 1 292 -20 2315 82 7 0 chr5 196219885 196220188 -3409962 - AluSq SINE Alu -8 305 1 227 216 20 0 chr5 196220339 196220390 -3409760 + LTR30 LTR ERV1 1 52 -670 2837 134 97 51 chr5 196220390 196220897 -3409253 + LTR12 LTR ERV1 53 582 -132 1940 114 10 10 chr5 196220904 196221194 -3408956 - AluSp SINE Alu -23 290 1 2573 208 58 21 chr5 196221204 196221824 -3408326 - L1MD1 LINE L1 0 6242 5600 2146 104 0 0 chr5 196221825 196222124 -3408026 - AluY SINE Alu -12 299 1 955 229 62 43 chr5 196222124 196222495 -3407655 - L1MD1 LINE L1 -1084 5062 4685 566 279 64 5 chr5 196222473 196222692 -3407458 - L1MD1 LINE L1 -2295 3851 3620 * 2117 144 20 30 chr5 196222680 196223075 -3407075 + L1MA9 LINE L1 5865 6255 -57 756 54 0 0 chr5 196223086 196223178 -3406972 - AluY SINE Alu -23 288 197 3541 171 23 13 chr5 196223178 196223791 -3406359 - ERVL LTR ERVL -3061 2703 2085 2977 159 56 58 chr5 196223835 196224453 -3405697 + L1MA9 LINE L1 5569 6187 -147 2020 194 49 5 chr5 196224453 196224861 -3405289 + MSTB LTR MaLR 1 426 0 2977 159 56 58 chr5 196224861 196224916 -3405234 + L1MA9 LINE L1 6187 6241 -93 1607 160 0 18 chr5 196224916 196225197 -3404953 - AluSx SINE Alu -36 276 1 2977 159 56 58 chr5 196225197 196225298 -3404852 + L1MA9 LINE L1 6241 6334 0 2375 72 10 0 chr5 196225465 196225771 -3404379 - AluY SINE Alu -2 309 1 1887 113 3 13 chr5 196225807 196226107 -3404043 + AluSq SINE Alu 1 297 -16 2069 39 4 4 chr5 196226207 196226465 -3403685 - AluY SINE Alu -53 258 1 2107 78 24 14 chr5 196226626 196226922 -3403228 - AluSg SINE Alu -11 299 1 1310 250 93 10 chr5 196227294 196227594 -3402556 + MER21B LTR ERV1 13 337 -526 373 258 121 87 chr5 196227633 196227955 -3402195 + MLT1I LTR MaLR 60 392 -17 1750 126 0 31 chr5 196228175 196228507 -3401643 - AluSx SINE Alu 0 323 1 1005 282 118 37 chr5 196228915 196229125 -3401025 + L2 LINE L2 1286 1478 -1836 745 255 66 0 chr5 196229125 196229321 -3400829 - MER3 DNA MER1_type 0 209 1 1005 282 118 37 chr5 196229321 196229652 -3400498 + L2 LINE L2 1478 1871 -1443 698 221 61 98 chr5 196229669 196229949 -3400201 + L1ME LINE L1 1471 1707 -5240 2246 80 3 13 chr5 196229949 196230250 -3399900 + AluSx SINE Alu 1 298 -14 698 221 61 98 chr5 196230250 196230416 -3399734 + L1ME LINE L1 1707 1878 -5069 1973 133 0 0 chr5 196230471 196230764 -3399386 - AluSg1 SINE Alu -16 293 1 1407 140 37 0 chr5 196230771 196231014 -3399136 - L1M3 LINE L1 -513 5821 5570 486 108 14 0 chr5 196231015 196231089 -3399061 + L1MB1 LINE L1 5876 5950 -218 1058 82 0 0 chr5 196231089 196231223 -3398927 + AluSg SINE Alu 1 134 -176 2015 130 3 0 chr5 196231223 196231516 -3398634 + AluSx SINE Alu 1 294 -18 1186 195 5 0 chr5 196231520 196231735 -3398415 + L1MB1 LINE L1 5945 6160 -29 2018 92 3 36 chr5 196231735 196232040 -3398110 - AluSq SINE Alu -18 295 1 507 164 181 9 chr5 196232040 196232156 -3397994 - FLAM_A SINE Alu -6 136 1 869 115 7 40 chr5 196232190 196232338 -3397812 - FLAM_C SINE Alu 0 143 1 767 270 134 55 chr5 196232431 196232748 -3397402 + L1ME LINE L1 1978 2269 -4869 2348 53 0 3 chr5 196232748 196233057 -3397093 + AluY SINE Alu 1 308 0 767 270 134 55 chr5 196233057 196233221 -3396929 + L1ME LINE L1 2269 2419 -4719 2080 116 0 13 chr5 196233221 196233522 -3396628 - AluSx SINE Alu -15 297 1 767 270 134 55 chr5 196233522 196233622 -3396528 + L1ME LINE L1 2419 2756 -4382 322 265 34 20 chr5 196233630 196233777 -3396373 + L1ME LINE L1 2971 3119 -3838 1343 203 3 43 chr5 196233788 196234088 -3396062 + AluJo SINE Alu 4 291 -21 1007 130 37 0 chr5 196234088 196234249 -3395901 + AluJb SINE Alu 126 292 -20 458 253 38 44 chr5 196234268 196234293 -3395857 + L1ME LINE L1 3146 3170 -3787 2227 90 0 7 chr5 196234293 196234592 -3395558 + AluSx SINE Alu 1 297 -15 458 253 38 44 chr5 196234592 196234724 -3395426 + L1ME LINE L1 3170 3302 -3655 528 264 75 19 chr5 196234744 196234956 -3395194 + L1ME LINE L1 11 234 -6625 279 254 5 138 chr5 196235024 196235213 -3394937 + L1ME LINE L1 759 922 -5937 1625 109 24 4 chr5 196235320 196235568 -3394582 - MER57B LTR ERV1 0 434 182 * 1911 97 43 0 chr5 196235555 196235812 -3394338 - MER57B LTR ERV1 -166 268 1 2344 221 84 29 chr5 196235995 196236073 -3394077 + L1MD1 LINE L1 5488 5560 -682 2308 74 3 0 chr5 196236073 196236369 -3393781 + AluSc SINE Alu 1 297 -12 2344 221 84 29 chr5 196236369 196237004 -3393146 + L1MD1 LINE L1 5560 6240 -2 2027 228 56 16 chr5 196237141 196237464 -3392686 + L1ME LINE L1 4473 4782 -2175 2088 54 69 0 chr5 196237464 196237768 -3392382 + AluY SINE Alu 1 311 0 2027 228 56 16 chr5 196237768 196238049 -3392101 + L1ME LINE L1 4782 5101 -1856 598 205 114 24 chr5 196238049 196238215 -3391935 + MLT1C LTR MaLR 1 181 -286 1534 99 26 4 chr5 196238217 196238449 -3391701 - AluSx SINE Alu -75 237 1 622 206 33 34 chr5 196238449 196238688 -3391462 + L1M4 LINE L1 2750 3033 -3113 2709 188 78 51 chr5 196238700 196238972 -3391178 - L1MCb LINE L1 -4851 1194 931 4118 89 37 25 chr5 196238972 196239570 -3390580 + LTR14B LTR ERVK 4 608 0 2709 188 78 51 chr5 196239570 196239628 -3390522 - L1MCb LINE L1 -5114 931 876 2009 120 0 7 chr5 196239628 196239928 -3390222 - AluSx SINE Alu -12 300 3 2709 188 78 51 chr5 196239928 196240477 -3389673 - L1MCb LINE L1 -5169 876 502 683 309 49 84 chr5 196240500 196240922 -3389228 - L1ME LINE L1 -4985 1387 885 386 229 69 8 chr5 196242707 196242838 -3387312 + MIR3 SINE MIR 16 154 -54 943 288 169 31 chr5 196243024 196243927 -3386223 + L2 LINE L2 2301 3313 0 369 306 93 29 chr5 196244151 196244287 -3385863 - L2 LINE L2 -374 2940 2814 2193 178 45 43 chr5 196244287 196244753 -3385397 + MLT1C LTR MaLR 1 467 0 369 306 93 29 chr5 196244753 196244845 -3385305 - L2 LINE L2 -500 2814 2729 1844 159 39 22 chr5 196244845 196245209 -3384941 - L1MB3 LINE L1 -8 6175 5806 369 306 93 29 chr5 196245209 196245290 -3384860 - L2 LINE L2 -585 2729 2610 7519 33 1 1 chr5 196246233 196247804 -3382346 - L1PA4 LINE L1 0 6155 4610 1940 122 4 4 chr5 196247804 196248082 -3382068 - AluSc SINE Alu -31 278 1 1546 177 27 7 chr5 196248939 196249238 -3380912 + AluJb SINE Alu 1 305 -7 346 302 50 29 chr5 196249370 196249509 -3380641 - MIR SINE MIR -56 206 65 661 188 9 0 chr5 196249573 196249685 -3380465 - MER81 DNA DNA -1 113 1 2143 108 10 0 chr5 196249777 196250073 -3380077 + AluSg SINE Alu 1 299 -11 3361 125 11 39 chr5 196251107 196251549 -3378601 + MER41A LTR ERV1 1 425 -129 2517 33 0 0 chr5 196251549 196251848 -3378302 - AluY SINE Alu -12 299 1 3361 125 11 39 chr5 196251848 196251975 -3378175 + MER41A LTR ERV1 425 554 0 371 41 20 0 chr5 196252036 196252085 -3378065 - MADE1 DNA Mariner 0 80 31 1694 108 112 7 chr5 196252344 196252622 -3377528 + AluSg1 SINE Alu 3 309 0 256 298 65 32 chr5 196252904 196253028 -3377122 - MIR SINE MIR -37 225 98 2149 67 0 3 chr5 196253029 196253346 -3376804 + AluY SINE Alu 1 316 0 363 273 79 135 chr5 196253513 196253869 -3376281 + L2 LINE L2 2937 3272 0 289 399 39 0 chr5 196253875 196254078 -3376072 + MIR SINE MIR 30 240 -22 2052 112 0 0 chr5 196254157 196254461 -3375689 + AluSg SINE Alu 5 308 0 204 374 0 0 chr5 196254943 196255066 -3375084 + (CAGA)n Simple_repeat Simple_repeat 4 126 0 328 333 0 0 chr5 196255230 196255368 -3374782 + (CAGA)n Simple_repeat Simple_repeat 1 138 0 372 343 0 0 chr5 196255689 196255867 -3374283 + (TCTG)n Simple_repeat Simple_repeat 1 178 0 204 184 0 0 chr5 196256178 196256227 -3373923 + (TCTG)n Simple_repeat Simple_repeat 1 49 0 310 335 6 6 chr5 196256579 196256755 -3373395 + (TCTG)n Simple_repeat Simple_repeat 1 176 0 230 299 0 51 chr5 196256817 196256873 -3373277 + (TCTG)n Simple_repeat Simple_repeat 1 58 -72 2215 100 3 0 chr5 196256873 196257174 -3372976 - AluSx SINE Alu -10 302 1 230 299 0 51 chr5 196257174 196257254 -3372896 + (TCTG)n Simple_repeat Simple_repeat 58 130 0 2097 135 0 0 chr5 196257802 196258105 -3372045 - AluSx SINE Alu -9 303 1 2666 203 23 16 chr5 196258555 196259131 -3371019 + L1MA10 LINE L1 4749 5328 -818 2122 97 0 10 chr5 196259133 196259433 -3370717 + AluSx SINE Alu 1 297 -15 4413 188 16 20 chr5 196259434 196259487 -3370663 + L1MA10 LINE L1 5433 5485 -849 2226 85 10 0 chr5 196259487 196259782 -3370368 + AluSp SINE Alu 1 298 -15 4413 188 16 20 chr5 196259782 196260634 -3369516 + L1MA10 LINE L1 5485 6334 0 2081 112 0 3 chr5 196260848 196261142 -3369008 - AluSx SINE Alu -9 303 11 411 98 33 0 chr5 196261142 196261194 -3368956 - Alu SINE Alu -261 57 1 191 204 0 93 chr5 196262339 196262393 -3367757 + MER5A DNA MER1_type 9 57 -132 494 178 220 34 chr5 196262405 196262523 -3367627 - FLAM_C SINE Alu -2 141 2 319 194 16 0 chr5 196262523 196262585 -3367565 + MER5A DNA MER1_type 47 109 -80 238 248 148 10 chr5 196262631 196262732 -3367418 - MER112 DNA MER1_type 0 260 146 369 235 117 14 chr5 196262825 196262967 -3367183 - MLT1J2 LTR MaLR -189 220 67 269 287 32 11 chr5 196263019 196263113 -3367037 + L2 LINE L2 3218 3313 0 1596 187 22 28 chr5 196263228 196263587 -3366563 + MLT1C LTR MaLR 65 421 -46 359 301 71 66 chr5 196263597 196263780 -3366370 + L2 LINE L2 3126 3309 -4 606 188 0 0 chr5 196264749 196264845 -3365305 + MER2 DNA MER2_type 1 96 -249 1513 148 7 64 chr5 196264845 196265128 -3365022 + AluJb SINE Alu 24 290 -22 24 0 0 0 chr5 196269103 196269127 -3361023 + AT_rich Low_complexity Low_complexity 1 24 0 789 192 245 16 chr5 196269453 196269771 -3360379 - Charlie2 DNA MER1_type -68 2794 2404 444 225 70 48 chr5 196269771 196269958 -3360192 - L1MD3 LINE L1 -34 7961 7771 722 130 0 17 chr5 196270015 196270130 -3360020 - FLAM_C SINE Alu -17 126 14 754 217 152 16 chr5 196270261 196270505 -3359645 - Charlie2 DNA MER1_type -715 2147 1871 277 263 136 57 chr5 196270802 196271049 -3359101 + L2 LINE L2 2927 3269 -3 2057 79 11 0 chr5 196271765 196272070 -3358080 - AluY SINE Alu 0 309 2 23 33 0 0 chr5 196272070 196272100 -3358050 + AT_rich Low_complexity Low_complexity 1 30 0 916 188 24 24 chr5 196273638 196273846 -3356304 + MER3 DNA MER1_type 1 208 -1 336 221 26 0 chr5 196274030 196274107 -3356043 + HsTC2 DNA Tc2 1820 1898 0 2229 81 3 3 chr5 196274125 196274422 -3355728 - AluSq SINE Alu -16 297 1 950 96 0 22 chr5 196274438 196274573 -3355577 - AluJb SINE Alu -176 136 5 2104 99 0 3 chr5 196274908 196275201 -3354949 - AluSg SINE Alu -16 294 3 1187 124 0 0 chr5 196275285 196275454 -3354696 - AluSg/x SINE Alu -12 300 132 207 0 0 0 chr5 196275454 196275477 -3354673 + (TA)n Simple_repeat Simple_repeat 2 24 0 29 60 0 0 chr5 196275477 196275527 -3354623 + AT_rich Low_complexity Low_complexity 1 50 0 1916 91 7 27 chr5 196275529 196275826 -3354324 - AluSq SINE Alu -22 291 1 1453 77 10 0 chr5 196277430 196277626 -3352524 + AluY SINE Alu 112 309 -2 2036 117 13 3 chr5 196278149 196278447 -3351703 - AluSx SINE Alu -11 301 1 536 211 26 4 chr5 196279130 196279279 -3350871 + MER58C DNA MER1_type 1 215 0 188 349 0 23 chr5 196279376 196279462 -3350688 + MIR SINE MIR 49 132 -130 2149 115 0 0 chr5 196279985 196280280 -3349870 - AluSx SINE Alu -17 295 1 25 31 0 0 chr5 196280283 196280315 -3349835 + AT_rich Low_complexity Low_complexity 1 32 0 1754 121 53 32 chr5 196280349 196280630 -3349520 + MER1B DNA MER1_type 53 339 0 192 40 0 0 chr5 196280656 196280681 -3349469 + (T)n Simple_repeat Simple_repeat 1 25 0 239 291 73 36 chr5 196280826 196280936 -3349214 + MER5B DNA MER1_type 3 116 -62 21 0 0 0 chr5 196281329 196281350 -3348800 + AT_rich Low_complexity Low_complexity 1 21 0 2071 85 3 7 chr5 196282519 196282831 -3347319 + AluSx SINE Alu 1 311 0 1939 131 0 3 chr5 196283024 196283321 -3346829 - AluSx SINE Alu -16 296 1 207 0 0 0 chr5 196284120 196284143 -3346007 + (T)n Simple_repeat Simple_repeat 1 23 0 2078 107 7 0 chr5 196284725 196285025 -3345125 + AluY SINE Alu 5 306 -5 907 198 0 6 chr5 196285519 196285681 -3344469 - FRAM SINE Alu -5 161 1 532 272 140 34 chr5 196285844 196286109 -3344041 - L1MC5 LINE L1 -39 7922 7630 333 250 102 39 chr5 196286153 196286281 -3343869 - L1MC5 LINE L1 -277 7684 7549 1879 131 108 17 chr5 196286609 196286953 -3343197 - THE1C LTR MaLR 0 375 1 1975 105 18 3 chr5 196287425 196287733 -3342417 - AluSq SINE Alu 0 312 1 2317 97 0 0 chr5 196287999 196288299 -3341851 + AluSq SINE Alu 1 300 -13 366 270 153 0 chr5 196288727 196288864 -3341286 + MIR SINE MIR 54 211 -51 1123 207 98 11 chr5 196289023 196289371 -3340779 - L1MEc LINE L1 -3980 2416 2039 4738 237 107 24 chr5 196289404 196291156 -3338994 - L1MEc LINE L1 -4362 1872 62 805 112 8 8 chr5 196291183 196291308 -3338842 + FLAM_C SINE Alu 1 125 -18 198 0 0 0 chr5 196291315 196291337 -3338813 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 22 0 0 0 chr5 196291446 196291468 -3338682 + AT_rich Low_complexity Low_complexity 1 22 0 261 145 29 43 chr5 196291638 196291707 -3338443 - MER20B DNA MER1_type 0 783 716 255 240 13 13 chr5 196291807 196291882 -3338268 - HERVL LTR ERVL -371 4625 4551 350 314 0 10 chr5 196291913 196292015 -3338135 - HERVL LTR ERVL -702 4952 4852 760 363 49 10 chr5 196292046 196292553 -3337597 - HERVL LTR ERVL -933 4831 4305 555 258 63 25 chr5 196292659 196293092 -3337058 + LTR33 LTR ERVL 6 521 0 280 317 44 44 chr5 196293181 196293364 -3336786 - L2 LINE L2 -236 3077 2895 25 51 0 0 chr5 196294639 196294678 -3335472 + GC_rich Low_complexity Low_complexity 1 39 0 219 211 13 40 chr5 196294945 196295021 -3335129 + (CGG)n Simple_repeat Simple_repeat 3 76 0 535 227 74 75 chr5 196299023 196299389 -3330761 - MLT1L LTR MaLR -217 398 3 1422 173 9 102 chr5 196302473 196302627 -3327523 + AluJo SINE Alu 5 172 -130 351 0 0 0 chr5 196302627 196302666 -3327484 + (TG)n Simple_repeat Simple_repeat 1 39 0 1755 128 59 0 chr5 196302666 196302939 -3327211 + AluSx SINE Alu 2 290 -22 1422 173 9 102 chr5 196302939 196303106 -3327044 + AluJo SINE Alu 170 297 -5 413 294 134 89 chr5 196303127 196303620 -3326530 - MLT1K LTR MaLR -71 517 3 1009 132 0 0 chr5 196304740 196304892 -3325258 - FRAM SINE Alu -3 173 22 2271 98 3 0 chr5 196305364 196305670 -3324480 - AluSx SINE Alu -5 307 1 1516 176 42 3 chr5 196305933 196306217 -3323933 - AluJo SINE Alu -17 295 1 2262 110 0 0 chr5 196306600 196306908 -3323242 - AluSx SINE Alu -4 308 1 2094 117 0 0 chr5 196307202 196307500 -3322650 + AluSg SINE Alu 1 298 -12 599 307 45 0 chr5 196307517 196307693 -3322457 + MIR SINE MIR 47 230 -32 303 270 0 30 chr5 196308610 196308710 -3321440 + (TG)n Simple_repeat Simple_repeat 1 97 0 476 265 0 6 chr5 196308723 196308904 -3321246 + (TG)n Simple_repeat Simple_repeat 1 180 0 1392 174 9 85 chr5 196318998 196319152 -3310998 + AluJo SINE Alu 5 169 -143 315 0 0 0 chr5 196319152 196319187 -3310963 + (TG)n Simple_repeat Simple_repeat 1 35 0 1784 133 57 0 chr5 196319187 196319466 -3310684 + AluSx SINE Alu 2 296 -16 1392 174 9 85 chr5 196319466 196319627 -3310523 + AluJo SINE Alu 167 297 -15 459 296 134 89 chr5 196319648 196320141 -3310009 - MLT1K LTR MaLR -71 517 3 998 142 0 0 chr5 196321260 196321415 -3308735 - FRAM SINE Alu 0 176 22 2378 93 0 0 chr5 196321901 196322213 -3307937 - AluSx SINE Alu 0 312 1 1530 173 42 3 chr5 196322476 196322760 -3307390 - AluJo SINE Alu -17 295 1 2262 110 0 0 chr5 196323143 196323451 -3306699 - AluSx SINE Alu -4 308 1 2084 121 0 0 chr5 196323745 196324043 -3306107 + AluSg SINE Alu 1 298 -12 599 307 45 0 chr5 196324060 196324236 -3305914 + MIR SINE MIR 47 230 -32 303 270 0 30 chr5 196325153 196325253 -3304897 + (TG)n Simple_repeat Simple_repeat 1 97 0 455 271 0 6 chr5 196325266 196325447 -3304703 + (TG)n Simple_repeat Simple_repeat 1 180 0 310 288 63 9 chr5 196325630 196325741 -3304409 + MIR SINE MIR 37 153 -55 507 267 95 5 chr5 196326040 196326250 -3303900 + MLT1B LTR MaLR 1 229 -161 1895 80 18 7 chr5 196326975 196327250 -3302900 + AluSg SINE Alu 11 288 -22 235 356 29 35 chr5 196327836 196328022 -3302128 + MIR SINE MIR 20 201 -61 338 304 101 32 chr5 196328490 196328707 -3301443 + L3 LINE CR1 1335 1566 -11 1797 185 57 42 chr5 196329091 196329341 -3300809 - L1ME2 LINE L1 -2 6162 5900 2165 116 0 0 chr5 196329341 196329642 -3300508 + AluSx SINE Alu 3 303 -9 1797 185 57 42 chr5 196329642 196329862 -3300288 - L1ME2 LINE L1 -264 5900 5685 2041 233 37 64 chr5 196330273 196330946 -3299204 - L1ME1 LINE L1 -2 6233 5579 3230 249 84 63 chr5 196330950 196331411 -3298739 - L1ME1 LINE L1 -4915 1481 1031 2404 63 3 0 chr5 196331411 196331710 -3298440 - AluY SINE Alu -11 300 1 3230 249 84 63 chr5 196331710 196332102 -3298048 - L1ME1 LINE L1 -5365 1031 649 185 0 40 0 chr5 196332102 196332127 -3298023 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 3230 249 84 63 chr5 196332127 196332147 -3298003 - L1ME1 LINE L1 -5747 649 631 2051 87 0 0 chr5 196332147 196332413 -3297737 - AluSx SINE Alu -41 271 6 3230 249 84 63 chr5 196332413 196332952 -3297198 - L1ME1 LINE L1 -5765 631 37 330 238 125 94 chr5 196332964 196333087 -3297063 - L1MD3 LINE L1 -12 7983 7865 1978 142 13 7 chr5 196333087 196333397 -3296753 + AluJb SINE Alu 1 312 0 330 238 125 94 chr5 196333397 196333416 -3296734 - L1MD3 LINE L1 -130 7865 7848 1537 215 175 40 chr5 196333416 196333964 -3296186 + MLT1E3 LTR MaLR 3 624 0 330 238 125 94 chr5 196333964 196333980 -3296170 - L1MD3 LINE L1 -147 7848 7819 4067 168 80 19 chr5 196334164 196335066 -3295084 + L1MB5 LINE L1 5218 6174 0 1514 202 71 6 chr5 196335144 196335496 -3294654 - L1MD3 LINE L1 -170 7825 7451 326 234 21 21 chr5 196335505 196335599 -3294551 - MLT1F1 LTR MaLR -438 129 36 3586 242 38 48 chr5 196335600 196335791 -3294359 - L1MC3 LINE L1 -688 7097 6906 1565 142 49 0 chr5 196335791 196336037 -3294113 - AluSx SINE Alu -54 258 1 3586 242 38 48 chr5 196336037 196336653 -3293497 - L1MC3 LINE L1 -879 6906 6303 2384 90 0 0 chr5 196336653 196336963 -3293187 - AluSx SINE Alu -2 310 1 3586 242 38 48 chr5 196336963 196337310 -3292840 - L1MC3 LINE L1 -1482 6303 5954 1995 111 3 46 chr5 196337342 196337666 -3292484 - AluSq SINE Alu -3 310 1 405 269 76 8 chr5 196337775 196337894 -3292256 + MIR SINE MIR 109 235 -27 1977 135 7 3 chr5 196339664 196339968 -3290182 + AluJb SINE Alu 1 305 -7 238 250 0 0 chr5 196340440 196340492 -3289658 + LTR30 LTR ERV1 1 52 -670 1961 151 83 34 chr5 196340494 196340913 -3289237 + LTR12 LTR ERV1 55 2173 -265 2114 73 30 7 chr5 196340913 196341216 -3288934 - AluY SINE Alu -1 310 1 1151 118 0 0 chr5 196341226 196341395 -3288755 - AluSg/x SINE Alu -2 308 140 191 300 55 10 chr5 196341415 196341548 -3288602 + MIR SINE MIR 18 157 -62 2156 95 7 3 chr5 196344407 196344702 -3285448 + AluSx SINE Alu 1 296 -16 291 286 0 0 chr5 196344841 196344911 -3285239 - MER112 DNA MER1_type -8 252 183 1107 210 97 32 chr5 196346088 196346459 -3283691 + MLT1C LTR MaLR 1 395 -72 2144 119 3 0 chr5 196346515 196346825 -3283325 - AluSq SINE Alu -2 311 1 375 41 0 0 chr5 196346826 196346875 -3283275 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 2268 75 0 0 chr5 196346875 196347156 -3282994 - AluSq SINE Alu -32 281 1 529 237 159 73 chr5 196347903 196348148 -3282002 - MLT1K LTR MaLR -57 531 266 1227 166 178 33 chr5 196348165 196348502 -3281648 + MLT1B LTR MaLR 1 386 -4 430 219 171 0 chr5 196348506 196348652 -3281498 + L1MB4 LINE L1 6004 6174 -6 511 299 49 72 chr5 196348664 196348928 -3281222 - MLT1K LTR MaLR -328 260 3 2215 122 0 0 chr5 196349018 196349330 -3280820 + AluSx SINE Alu 1 312 0 526 288 68 27 chr5 196349347 196349566 -3280584 + MIR SINE MIR 2 229 -33 1328 162 34 97 chr5 196350310 196350491 -3279659 - AluJo SINE Alu -11 301 147 2176 82 14 0 chr5 196350491 196350773 -3279377 + AluSc SINE Alu 1 286 -23 1328 162 34 97 chr5 196350773 196350912 -3279238 - AluJo SINE Alu -165 147 1 210 71 0 0 chr5 196351178 196351206 -3278944 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 218 302 42 31 chr5 196351747 196351843 -3278307 + L2 LINE L2 3210 3306 -7 194 127 56 0 chr5 196352297 196352368 -3277782 + (TA)n Simple_repeat Simple_repeat 2 76 0 989 199 43 14 chr5 196352998 196353209 -3276941 + MER20 DNA MER1_type 3 219 0 27 0 0 0 chr5 196353503 196353530 -3276620 + AT_rich Low_complexity Low_complexity 1 27 0 2162 122 3 0 chr5 196353655 196353966 -3276184 - AluSq SINE Alu -1 312 1 22 0 0 0 chr5 196354082 196354104 -3276046 + AT_rich Low_complexity Low_complexity 1 22 0 2263 65 7 7 chr5 196354208 196354500 -3275650 + AluSx SINE Alu 3 294 -18 320 266 43 75 chr5 196354536 196354710 -3275440 - L1ME LINE L1 -333 5837 5666 * 344 333 53 18 chr5 196354683 196354854 -3275296 + L1 LINE L1 5155 5331 -815 686 116 0 0 chr5 196354856 196354951 -3275199 + AluSc SINE Alu 206 300 -9 248 308 85 54 chr5 196354991 196355215 -3274935 - L2 LINE L2 -799 2515 2285 327 91 0 0 chr5 196355381 196355425 -3274725 - MLT2D LTR ERVL -4 410 367 424 200 11 0 chr5 196355441 196355616 -3274534 + (TG)n Simple_repeat Simple_repeat 1 177 0 366 172 0 0 chr5 196356278 196356377 -3273773 + (TG)n Simple_repeat Simple_repeat 1 99 0 439 155 0 0 chr5 196356385 196356456 -3273694 - MLT2C1 LTR ERVL -41 356 286 384 287 110 12 chr5 196357844 196358008 -3272142 + MIR SINE MIR 77 256 -6 1512 143 21 90 chr5 196358723 196359058 -3271092 - AluJo SINE Alu 0 312 1 1623 153 109 47 chr5 196359723 196360063 -3270087 + MLT1A1 LTR MaLR 1 361 -4 313 211 0 0 chr5 196360064 196360121 -3270029 + MLT1A1 LTR MaLR 309 365 0 2152 104 3 0 chr5 196360430 196360729 -3269421 + AluSq SINE Alu 1 300 -13 1314 229 229 40 chr5 196361468 196361506 -3268644 - L1ME3A LINE L1 0 6170 6140 1684 94 75 97 chr5 196361506 196361814 -3268336 + AluSq SINE Alu 1 301 -12 1314 229 229 40 chr5 196361814 196362256 -3267894 - L1ME3A LINE L1 -30 6140 5549 1910 109 47 0 chr5 196362256 196362531 -3267619 - AluSx SINE Alu -24 288 1 1314 229 229 40 chr5 196362531 196362657 -3267493 - L1ME3A LINE L1 -621 5549 5448 * 1968 253 144 54 chr5 196362652 196362887 -3267263 - L1ME3A LINE L1 -1308 4838 4625 1683 177 0 19 chr5 196362887 196363197 -3266953 - AluJb SINE Alu -8 304 1 1968 253 144 54 chr5 196363197 196364248 -3265902 - L1ME3A LINE L1 -1521 4625 3437 2324 100 3 0 chr5 196364256 196364567 -3265583 - AluSx SINE Alu 0 312 1 2858 203 13 2 chr5 196364579 196365135 -3265015 - L1MB7 LINE L1 -8 6176 5615 286 232 125 0 chr5 196365135 196365247 -3264903 - L1MC/D LINE L1 -1983 5825 5700 970 239 60 38 chr5 196365250 196365564 -3264586 + MER5C DNA MER1_type 3 323 -1 1205 194 253 3 chr5 196365720 196366060 -3264090 + L1MB3 LINE L1 5755 6179 -4 2238 95 3 9 chr5 196368557 196368872 -3261278 + AluSq SINE Alu 1 313 0 2196 93 20 0 chr5 196369031 196369332 -3260818 - AluSg SINE Alu -3 307 1 1500 251 46 3 chr5 196369400 196369750 -3260400 + MLT1A1 LTR MaLR 1 365 0 1868 177 77 8 chr5 196369950 196370034 -3260116 + L1MB3 LINE L1 5752 5829 -354 2240 92 0 3 chr5 196370034 196370327 -3259823 + AluSg SINE Alu 1 292 -18 1868 177 77 8 chr5 196370327 196370653 -3259497 + L1MB3 LINE L1 5829 6183 0 256 266 96 0 chr5 196370713 196370807 -3259343 - MIR SINE MIR -70 192 90 986 259 22 37 chr5 196370867 196371191 -3258959 - MLT1A2 LTR MaLR -48 326 8 380 264 9 18 chr5 196371198 196371308 -3258842 + MIR SINE MIR 70 178 -84 363 309 115 11 chr5 196372195 196372386 -3257764 - MLT1L LTR MaLR -2 613 403 427 234 131 14 chr5 196372454 196372599 -3257551 + MIR3 SINE MIR 22 183 -25 978 280 80 59 chr5 196372599 196372665 -3257485 - MLT1G1 LTR MaLR 0 595 532 1961 121 7 3 chr5 196372665 196372954 -3257196 + AluSp SINE Alu 1 290 -23 978 280 80 59 chr5 196372954 196373362 -3256788 - MLT1G1 LTR MaLR -63 532 61 1671 176 7 3 chr5 196373362 196373652 -3256498 - AluJb SINE Alu -21 291 1 978 280 80 59 chr5 196373652 196373711 -3256439 - MLT1G1 LTR MaLR -534 61 5 367 153 21 181 chr5 196374207 196374351 -3255799 - MLT1K LTR MaLR -14 574 454 253 253 0 84 chr5 196374589 196374684 -3255466 + MLT1H1 LTR MaLR 225 311 -284 334 290 152 0 chr5 196374754 196374892 -3255258 + MLT1H1 LTR MaLR 397 555 0 568 293 128 66 chr5 196374895 196375011 -3255139 - MLT1K LTR MaLR -221 367 260 2085 93 14 0 chr5 196375011 196375300 -3254850 - AluSp SINE Alu -20 293 1 568 293 128 66 chr5 196375300 196375518 -3254632 - MLT1K LTR MaLR -328 260 12 343 183 0 42 chr5 196377209 196377280 -3252870 - MLT1K LTR MaLR -12 576 509 264 208 0 0 chr5 196377337 196377390 -3252760 - MLT1K LTR MaLR -173 415 363 351 362 125 4 chr5 196377421 196377653 -3252497 - MLT1K LTR MaLR -319 269 10 302 242 12 55 chr5 196378760 196378868 -3251282 + MIR SINE MIR 48 148 -64 270 56 0 0 chr5 196378979 196379015 -3251135 + (TGAG)n Simple_repeat Simple_repeat 4 39 0 1129 296 52 5 chr5 196379294 196379778 -3250372 + MLT1K LTR MaLR 12 588 0 2077 122 30 0 chr5 196380374 196380552 -3249598 - AluSq SINE Alu 0 313 142 582 51 0 0 chr5 196380552 196380630 -3249520 + (TC)n Simple_repeat Simple_repeat 2 79 0 * 675 67 0 0 chr5 196380629 196380718 -3249432 + (TA)n Simple_repeat Simple_repeat 2 90 0 2077 122 30 0 chr5 196380630 196380843 -3249307 - AluSq SINE Alu -171 142 1 2007 201 16 7 chr5 196381825 196382259 -3247891 - L1MB4 LINE L1 0 6180 5743 2412 60 0 0 chr5 196382290 196382589 -3247561 - AluY SINE Alu -12 299 1 1959 170 45 9 chr5 196382623 196382958 -3247192 + MER7A DNA MER2_type 2 346 0 309 331 38 23 chr5 196383032 196383165 -3246985 - MIR SINE MIR -6 256 122 419 209 172 6 chr5 196386142 196386223 -3243927 + MER2 DNA MER2_type 156 222 -123 1715 164 7 32 chr5 196386223 196386533 -3243617 - AluJo SINE Alu -10 302 1 419 209 172 6 chr5 196386533 196386614 -3243536 + MER2 DNA MER2_type 222 345 0 478 279 76 6 chr5 196386626 196386784 -3243366 + MIR SINE MIR 49 217 -45 292 330 30 0 chr5 196386862 196386962 -3243188 + MER5B DNA MER1_type 17 119 -59 293 167 17 0 chr5 196386975 196387035 -3243115 + LTR33 LTR ERVL 20 80 -441 639 199 106 7 chr5 196387224 196387365 -3242785 - AluJb SINE Alu -21 291 137 1448 214 155 15 chr5 196387376 196387833 -3242317 - MER74B LTR ERVL -25 597 77 2278 92 10 0 chr5 196387836 196388140 -3242010 + AluSq SINE Alu 1 307 -6 251 295 42 0 chr5 196388202 196388297 -3241853 + LTR33 LTR ERVL 423 521 0 3006 182 34 0 chr5 196390104 196390631 -3239519 + L1MB3 LINE L1 5631 6175 -8 957 251 91 6 chr5 196391400 196391719 -3238431 - MER113 DNA MER1_type? -149 372 27 339 224 188 28 chr5 196392317 196392493 -3237657 - MIR SINE MIR -30 232 36 268 282 146 0 chr5 196393077 196393180 -3236970 - MIR SINE MIR -37 225 108 206 217 17 50 chr5 196393660 196393720 -3236430 + L2 LINE L2 3213 3270 -43 308 279 136 43 chr5 196394426 196394566 -3235584 + MIR SINE MIR 30 182 -80 331 291 99 33 chr5 196394611 196394793 -3235357 + Charlie8 DNA MER1_type 50 243 -2174 2385 189 20 0 chr5 196394894 196395332 -3234818 + L1MB3 LINE L1 5733 6179 -4 310 308 50 17 chr5 196395688 196395808 -3234342 + MIR SINE MIR 47 170 -92 269 308 26 0 chr5 196397272 196397350 -3232800 - L2 LINE L2 -3 3269 3190 277 294 50 25 chr5 196397592 196397711 -3232439 - MIR SINE MIR -25 237 116 386 239 177 16 chr5 196399311 196399554 -3230596 - L1ME4a LINE L1 -3 6118 5837 2105 124 0 0 chr5 196399595 196399893 -3230257 - AluSx SINE Alu -12 300 3 2931 231 95 73 chr5 196399899 196400681 -3229469 - L1MC5 LINE L1 -36 7925 7162 245 29 29 0 chr5 196400681 196400715 -3229435 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2056 128 17 0 chr5 196400717 196401015 -3229135 - AluSx SINE Alu -9 303 1 2931 231 95 73 chr5 196401015 196401731 -3228419 - L1MC5 LINE L1 -799 7162 6396 511 279 160 46 chr5 196401791 196401923 -3228227 - L1ME4a LINE L1 -260 5861 5745 2284 98 0 3 chr5 196401923 196402228 -3227922 + AluSx SINE Alu 1 304 -8 511 279 160 46 chr5 196402228 196402332 -3227818 - L1ME4a LINE L1 -376 5745 5598 367 299 44 64 chr5 196402557 196402726 -3227424 - L1ME4a LINE L1 -830 5316 5150 2342 65 3 0 chr5 196402726 196403020 -3227130 - AluSp SINE Alu -18 295 1 367 299 44 64 chr5 196403020 196403054 -3227096 - L1ME4a LINE L1 -996 5150 5117 1135 217 152 26 chr5 196404224 196404639 -3225511 + MLT1C LTR MaLR 1 467 0 316 200 31 0 chr5 196404840 196404905 -3225245 - MIR SINE MIR -102 160 94 192 220 200 0 chr5 196405593 196405643 -3224507 + MIR SINE MIR 2 61 -201 1054 198 14 5 chr5 196405743 196405955 -3224195 + Tigger3(Golem) DNA MER2_type 2815 3028 -1 531 306 35 45 chr5 196406029 196406285 -3223865 - MIR SINE MIR -6 256 3 565 205 21 5 chr5 196406652 196407084 -3223066 + (TCCA)n Simple_repeat Simple_repeat 1 439 0 208 323 15 0 chr5 196407102 196407167 -3222983 - L2 LINE L2 -16 3256 3191 381 245 0 10 chr5 196407261 196407359 -3222791 + Charlie8 DNA MER1_type 104 200 -2217 201 139 0 28 chr5 196407608 196407644 -3222506 + MIR SINE MIR 111 145 -117 21 36 0 0 chr5 196407982 196408010 -3222140 + GC_rich Low_complexity Low_complexity 1 28 0 233 139 0 0 chr5 196408064 196408100 -3222050 - Alu SINE Alu -242 59 24 6730 59 25 12 chr5 196408100 196408928 -3221222 + SVA Other Other 548 1386 0 2455 86 0 0 chr5 196408955 196409258 -3220892 + AluSg SINE Alu 1 303 -7 403 222 33 22 chr5 196409553 196409643 -3220507 - L2 LINE L2 0 3313 3223 266 260 126 75 chr5 196410047 196410301 -3219849 - L2 LINE L2 -177 3095 2829 3303 169 12 23 chr5 196412298 196412942 -3217208 + L1MB3 LINE L1 5547 6183 0 428 260 75 0 chr5 196412996 196413142 -3217008 + MLT1E2 LTR MaLR 247 403 -223 * 968 207 126 0 chr5 196413139 196413385 -3216765 + MLT1E2 LTR MaLR 308 584 -42 768 249 34 10 chr5 196413395 196413604 -3216546 + MIR SINE MIR 48 261 -1 314 210 16 0 chr5 196413853 196413915 -3216235 + MIR SINE MIR 48 110 -152 747 293 24 31 chr5 196414597 196414941 -3215209 - L1MC/D LINE L1 -324 5797 5450 343 322 191 33 chr5 196415657 196416054 -3214096 - L1ME4a LINE L1 -39 6082 5623 192 163 0 0 chr5 196416090 196416133 -3214017 + T-rich Low_complexity Low_complexity 1 43 0 1095 65 0 0 chr5 196416133 196416271 -3213879 - L1PA3 LINE L1 0 6155 6018 2174 107 4 0 chr5 196416271 196416552 -3213598 - AluSx SINE Alu -28 284 3 201 175 25 0 chr5 196417187 196417227 -3212923 - MIR3 SINE MIR -10 198 158 331 245 32 90 chr5 196417236 196417293 -3212857 - MER5A DNA MER1_type -5 184 125 2337 99 0 7 chr5 196417293 196417596 -3212554 + AluSg1 SINE Alu 1 301 -8 331 245 32 90 chr5 196417596 196417693 -3212457 - MER5A DNA MER1_type -64 125 39 270 197 98 0 chr5 196417717 196417778 -3212372 - MIR3 SINE MIR -48 160 94 802 176 48 0 chr5 196417835 196418000 -3212150 + L1MDa LINE L1 19 191 -6349 421 194 51 20 chr5 196418005 196418103 -3212047 + L1MDa LINE L1 288 388 -6152 3973 214 77 20 chr5 196418131 196418774 -3211376 + L1MDa LINE L1 795 1527 -5013 222 37 0 0 chr5 196418774 196418801 -3211349 + (GAA)n Simple_repeat Simple_repeat 1 27 0 3973 214 77 20 chr5 196418801 196419254 -3210896 + L1MDa LINE L1 1527 1953 -4587 188 256 0 0 chr5 196419254 196419293 -3210857 - L2 LINE L2 -12 3301 3263 251 326 11 0 chr5 196419299 196419391 -3210759 - MIR SINE MIR -93 169 77 589 353 39 6 chr5 196419412 196419746 -3210404 + L1MC4a LINE L1 5659 6003 -1805 387 271 151 56 chr5 196419873 196420192 -3209958 + L1MC4a LINE L1 6251 6594 -1214 1806 199 64 38 chr5 196421089 196421267 -3208883 + MLT1C LTR MaLR 1 173 -294 2275 98 7 10 chr5 196421267 196421563 -3208587 + AluSx SINE Alu 5 299 -13 1806 199 64 38 chr5 196421563 196421836 -3208314 + MLT1C LTR MaLR 173 464 -3 506 221 44 15 chr5 196421911 196422047 -3208103 + Charlie8 DNA MER1_type 96 235 -2182 267 188 65 212 chr5 196423004 196423329 -3206821 - L1MC4 LINE L1 -1 8041 7765 1631 114 129 11 chr5 196423450 196423713 -3206437 - AluSg1 SINE Alu -15 294 1 758 288 50 50 chr5 196423946 196424328 -3205822 - L1ME LINE L1 -413 5740 5359 2173 102 0 10 chr5 196424382 196424675 -3205475 + AluY SINE Alu 1 290 -21 1415 206 109 46 chr5 196424847 196425226 -3204924 - L1MDa LINE L1 -5532 1008 654 2127 90 35 7 chr5 196425226 196425515 -3204635 - AluSx SINE Alu -15 297 1 1415 206 109 46 chr5 196425515 196425701 -3204449 - L1MDa LINE L1 -5886 654 100 461 259 37 54 chr5 196425844 196426141 -3204009 - L1ME LINE L1 -913 5216 4925 1579 189 0 66 chr5 196426158 196426491 -3203659 - AluJo SINE Alu -1 311 1 541 200 73 42 chr5 196426502 196426667 -3203483 - L1MA10 LINE L1 -2 6332 6163 1287 260 38 21 chr5 196426730 196427153 -3202997 - L1ME1 LINE L1 -167 5999 5570 1571 193 35 12 chr5 196427157 196427499 -3202651 - L1MC3 LINE L1 -248 7537 7188 2101 134 6 13 chr5 196427675 196427989 -3202161 - AluSx SINE Alu 0 312 1 281 283 25 13 chr5 196427992 196428151 -3201999 - L1ME LINE L1 -3866 2263 2103 240 313 48 24 chr5 196428350 196428516 -3201634 - L1M2 LINE L1 -4345 2504 2335 784 123 14 65 chr5 196428518 196428536 -3201614 - FLAM_C SINE Alu -169 133 116 516 16 0 0 chr5 196428536 196428597 -3201553 + (TA)n Simple_repeat Simple_repeat 1 61 0 784 123 14 65 chr5 196428597 196428716 -3201434 - FLAM_C SINE Alu -186 116 3 324 281 133 66 chr5 196428798 196429432 -3200718 - L1ME LINE L1 -4862 1257 582 790 261 74 13 chr5 196430774 196431004 -3199146 + MIR SINE MIR 18 261 -1 192 40 0 0 chr5 196431329 196431354 -3198796 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 1853 87 45 0 chr5 196432129 196432371 -3197779 - AluSx SINE Alu -22 290 38 216 323 61 10 chr5 196433682 196433781 -3196369 - L2 LINE L2 -51 3262 3159 707 266 81 6 chr5 196433798 196434026 -3196124 - MIR SINE MIR -11 251 10 596 206 7 35 chr5 196434088 196434229 -3195921 - L1MB7 LINE L1 -240 5944 5808 1704 159 103 14 chr5 196434237 196434588 -3195562 - MLT1B LTR MaLR -8 382 1 36 44 0 15 chr5 196434746 196434768 -3195382 + AT_rich Low_complexity Low_complexity 1 22 -45 2332 90 0 0 chr5 196434768 196435057 -3195093 + AluSx SINE Alu 1 289 -23 36 44 0 15 chr5 196435057 196435102 -3195048 + AT_rich Low_complexity Low_complexity 22 67 0 401 165 53 18 chr5 196435625 196435795 -3194355 + CT-rich Low_complexity Low_complexity 1 176 0 344 177 6 1 chr5 196435877 196435965 -3194185 - L1ME1 LINE L1 -1 6183 6083 306 109 0 0 chr5 196435965 196436020 -3194130 - L1MB4 LINE L1 0 6180 6126 1136 160 52 21 chr5 196436022 196436216 -3193934 - AluJo SINE Alu -26 286 87 2370 185 13 50 chr5 196436218 196436547 -3193603 - L1MB3 LINE L1 -47 6136 5833 2372 82 33 7 chr5 196436547 196436851 -3193299 - AluSq SINE Alu -1 312 1 2370 185 13 50 chr5 196436851 196437067 -3193083 - L1MB3 LINE L1 -350 5833 5611 2031 179 85 47 chr5 196437243 196437758 -3192392 - MLT2B3 LTR ERVL 0 554 20 274 141 94 0 chr5 196438050 196438114 -3192036 + L1MA10 LINE L1 6258 6327 -7 321 289 141 13 chr5 196438692 196438841 -3191309 - MIR SINE MIR -20 242 75 1228 106 0 6 chr5 196439309 196439513 -3190637 + AluSq SINE Alu 125 327 0 2340 92 6 29 chr5 196440996 196441311 -3188839 - AluSx SINE Alu -2 310 3 2117 120 3 13 chr5 196441313 196441613 -3188537 - AluJo SINE Alu -15 297 1 197 277 67 67 chr5 196441836 196441955 -3188195 + L3 LINE CR1 1192 1310 -267 2475 73 3 0 chr5 196441961 196442262 -3187888 - AluY SINE Alu -9 302 1 243 307 22 78 chr5 196442265 196442444 -3187706 - L2 LINE L2 -101 3171 3003 2123 105 49 0 chr5 196442580 196442865 -3187285 + AluSq SINE Alu 1 299 -14 23 68 0 0 chr5 196443207 196443251 -3186899 + AT_rich Low_complexity Low_complexity 1 44 0 1148 153 0 0 chr5 196443704 196443874 -3186276 - FRAM SINE Alu -2 174 5 2307 87 0 29 chr5 196443880 196444192 -3185958 - AluY SINE Alu -8 303 1 3908 168 75 30 chr5 196444201 196444770 -3185380 - L1MB4 LINE L1 -38 6142 5600 1960 65 8 0 chr5 196444770 196445018 -3185132 - L1PA5 LINE L1 0 6154 5905 3908 168 75 30 chr5 196445018 196445265 -3184885 - L1MB4 LINE L1 -580 5600 5366 198 0 0 0 chr5 196445265 196445287 -3184863 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3908 168 75 30 chr5 196445287 196445589 -3184561 - L1MB4 LINE L1 -814 5366 4971 2054 116 55 7 chr5 196445646 196445939 -3184211 - AluSx SINE Alu 0 312 6 408 218 29 132 chr5 196446572 196446670 -3183480 - L1MC5 LINE L1 -106 7855 7749 1729 194 35 15 chr5 196446670 196447010 -3183140 + MER7A DNA MER2_type 1 345 -1 408 218 29 132 chr5 196447010 196447154 -3182996 - L1MC5 LINE L1 -212 7749 7638 548 269 19 13 chr5 196447458 196447614 -3182536 + MIR SINE MIR 14 170 -92 225 0 0 0 chr5 196447682 196447707 -3182443 + (CAT)n Simple_repeat Simple_repeat 3 27 0 264 270 40 0 chr5 196448881 196448955 -3181195 + MIR SINE MIR 112 188 -74 280 257 154 59 chr5 196449762 196449898 -3180252 - MIR SINE MIR -111 151 3 * 426 365 55 0 chr5 196449898 196450046 -3180104 + MIR SINE MIR 82 239 -23 1727 226 126 50 chr5 196450181 196450331 -3179819 + MLT1E1 LTR MaLR 4 141 -513 1687 194 58 35 chr5 196450331 196450764 -3179386 - LTR47B LTR ERVL 0 443 1 1727 226 126 50 chr5 196450764 196451218 -3178932 + MLT1E1 LTR MaLR 141 654 0 476 206 48 32 chr5 196451251 196451377 -3178773 - MLT1E LTR MaLR -8 585 458 311 289 31 0 chr5 196451377 196451474 -3178676 + L2 LINE L2 2956 3055 -258 1971 151 17 0 chr5 196452887 196453185 -3176965 - AluSq SINE Alu -10 303 1 2219 105 9 29 chr5 196453302 196453617 -3176533 + AluSp SINE Alu 2 310 -3 639 62 0 0 chr5 196503736 196503816 -3126334 + AluY SINE Alu 18 97 -214 1146 96 0 0 chr5 196503820 196503976 -3126174 + AluSg/x SINE Alu 143 298 -12 466 103 0 0 chr5 196503976 196504044 -3126106 + MSTA LTR MaLR 361 428 0 512 136 23 23 chr5 196504114 196504202 -3125948 + MER2 DNA MER2_type 3 90 -255 467 172 81 0 chr5 196504207 196504306 -3125844 - FRAM SINE Alu 0 176 70 702 124 16 0 chr5 196504306 196504427 -3125723 + MER2 DNA MER2_type 84 206 -139 1961 135 3 3 chr5 196504438 196504735 -3125415 - AluSx SINE Alu -15 297 1 2088 116 42 25 chr5 196504735 196505096 -3125054 - MSTA LTR MaLR -55 373 7 180 164 45 0 chr5 196506246 196506313 -3123837 + (TGGA)n Simple_repeat Simple_repeat 3 72 0 962 77 27 31 chr5 196506355 196506621 -3123529 + (TGGA)n Simple_repeat Simple_repeat 1 265 0 761 78 34 45 chr5 196506636 196506815 -3123335 + (TGGA)n Simple_repeat Simple_repeat 2 178 0 243 288 27 0 chr5 196506829 196506902 -3123248 - L2 LINE L2 -666 2648 2574 556 269 188 35 chr5 196506942 196507310 -3122840 - MLT1K LTR MaLR -3 585 162 1516 84 0 42 chr5 196507452 196507667 -3122483 + AluY SINE Alu 1 206 -105 518 138 0 11 chr5 196508285 196508380 -3121770 - L1PA16 LINE L1 -291 5875 5785 188 302 47 23 chr5 196508921 196509007 -3121143 + L2 LINE L2 2717 2804 -510 2231 100 0 0 chr5 196509518 196509827 -3120323 - AluSg SINE Alu -1 309 1 2080 97 31 3 chr5 196509928 196510218 -3119932 + AluSx SINE Alu 1 298 -14 245 111 44 0 chr5 196510310 196510355 -3119795 + (CACGT)n Simple_repeat Simple_repeat 4 50 0 842 199 39 0 chr5 196510877 196511033 -3119117 + AluSg/x SINE Alu 120 281 -31 441 165 0 134 chr5 196511033 196511079 -3119071 + L1MB2 LINE L1 5785 5836 -335 2534 55 0 0 chr5 196511079 196511387 -3118763 + AluY SINE Alu 1 308 -3 441 165 0 134 chr5 196511387 196511467 -3118683 + L1MB2 LINE L1 5836 5894 -277 447 215 12 117 chr5 196511646 196511809 -3118341 + L1MB2 LINE L1 6019 6164 -7 320 98 39 0 chr5 196511863 196511914 -3118236 + L1MB7 LINE L1 6131 6183 -1 293 333 109 30 chr5 196512669 196513062 -3117088 - L2 LINE L2 -63 3250 2827 440 221 77 0 chr5 196513086 196513190 -3116960 - MER81 DNA DNA -2 112 1 237 335 16 16 chr5 196515266 196515419 -3114731 + MIR SINE MIR 9 163 -45 3260 152 44 12 chr5 196516623 196517194 -3112956 - L1MB5 LINE L1 0 6174 5586 349 308 76 50 chr5 196518439 196518637 -3111513 + MIR SINE MIR 24 226 -36 446 245 68 25 chr5 196518975 196519138 -3111012 - MIR SINE MIR -69 193 24 317 269 93 9 chr5 196520213 196520321 -3109829 + MER103 DNA DNA 3 119 -47 218 189 0 0 chr5 196521283 196521320 -3108830 + MIR SINE MIR 111 147 -61 3411 160 49 2 chr5 196521632 196522207 -3107943 + LTR26 LTR ERV1 1 602 -1 224 307 71 57 chr5 196523246 196523386 -3106764 - MIR SINE MIR -113 149 8 984 205 37 0 chr5 196524629 196524844 -3105306 - AluJb SINE Alu -3 309 87 345 145 0 0 chr5 196524988 196525050 -3105100 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 274 288 70 27 chr5 196525275 196525429 -3104721 - MIR SINE MIR -63 145 10 804 228 245 20 chr5 196525714 196526170 -3103980 + MLT1K LTR MaLR 5 580 -8 192 259 233 10 chr5 196526443 196526636 -3103514 + L2 LINE L2 2813 3048 -224 269 342 31 54 chr5 196528953 196529171 -3100979 + MIR SINE MIR 4 212 -50 2067 120 0 13 chr5 196529910 196530211 -3099939 + AluSq SINE Alu 4 300 -13 182 188 0 0 chr5 196531661 196531693 -3098457 - MIR SINE MIR -216 46 15 809 315 136 24 chr5 196532505 196533042 -3097108 - L3 LINE CR1 -9 1568 972 230 277 21 21 chr5 196533523 196533617 -3096533 + (TGGA)n Simple_repeat Simple_repeat 4 97 0 197 282 243 0 chr5 196533626 196533729 -3096421 + MIR SINE MIR 56 183 -79 190 331 22 94 chr5 196534488 196534669 -3095481 - MIR3 SINE MIR -25 183 16 862 172 37 37 chr5 196534672 196534835 -3095315 - FRAM SINE Alu -13 163 1 2345 80 0 3 chr5 196536547 196536858 -3093292 - AluSx SINE Alu -2 310 1 259 191 7 19 chr5 196536865 196536935 -3093215 - AluJb SINE Alu -176 126 70 206 0 69 0 chr5 196537117 196537146 -3093004 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 2027 130 3 0 chr5 196537146 196537465 -3092685 + AluSq SINE Alu 1 320 0 810 74 0 28 chr5 196537477 196537585 -3092565 + AluSg SINE Alu 1 105 -205 217 306 143 10 chr5 196538253 196538351 -3091799 - MIR SINE MIR -62 146 36 234 0 0 0 chr5 196538411 196538437 -3091713 + (A)n Simple_repeat Simple_repeat 1 26 0 666 43 172 0 chr5 196538469 196538562 -3091588 + AluY SINE Alu 195 303 -8 423 176 14 0 chr5 196538562 196538636 -3091514 - MER4D LTR ERV1 -41 862 788 2592 117 32 62 chr5 196538844 196538944 -3091206 - MER4D LTR ERV1 -219 684 583 1565 197 14 7 chr5 196538944 196539239 -3090911 + AluJo SINE Alu 1 297 -15 2027 147 0 0 chr5 196539241 196539554 -3090596 + AluSq SINE Alu 1 313 0 2592 117 32 62 chr5 196539554 196539567 -3090583 - MER4D LTR ERV1 -321 582 570 1924 97 72 4 chr5 196539567 196539846 -3090304 + AluSg SINE Alu 1 298 -12 2592 117 32 62 chr5 196539846 196540224 -3089926 - MER4D LTR ERV1 -333 570 204 791 140 0 56 chr5 196540224 196540367 -3089783 + AluSq/x SINE Alu 1 135 -178 666 129 11 0 chr5 196540798 196540891 -3089259 - AluS SINE Alu -217 95 2 2807 227 40 5 chr5 196540923 196541751 -3088399 - L1M4 LINE L1 -2211 4433 3577 2262 90 0 10 chr5 196541751 196542086 -3088064 - AluSx SINE Alu 0 312 1 1981 80 33 43 chr5 196542098 196542398 -3087752 - AluSg1 SINE Alu -12 297 1 3922 196 50 15 chr5 196542398 196542585 -3087565 - L1M4 LINE L1 -4734 1912 1733 1792 117 52 31 chr5 196542585 196542754 -3087396 - AluSx SINE Alu -15 297 118 261 0 0 0 chr5 196542754 196542783 -3087367 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1792 117 52 31 chr5 196542783 196542904 -3087246 - AluSx SINE Alu -194 118 1 3922 196 50 15 chr5 196542904 196543833 -3086317 - L1M4 LINE L1 -4913 1733 764 225 241 96 24 chr5 196549979 196550062 -3080088 + MIR SINE MIR 21 109 -153 508 149 88 53 chr5 196551889 196552003 -3078147 + MLT1A1 LTR MaLR 248 365 0 461 270 135 12 chr5 196552009 196552261 -3077889 + L1ME3A LINE L1 3473 3755 -2391 597 273 57 84 chr5 196552285 196552620 -3077530 + L1ME3A LINE L1 4936 5278 -892 231 103 0 0 chr5 196552620 196552659 -3077491 + (CA)n Simple_repeat Simple_repeat 2 40 0 597 273 57 84 chr5 196552659 196552739 -3077411 + L1ME3A LINE L1 5278 5359 -811 2474 37 14 3 chr5 196552739 196553036 -3077114 - AluY SINE Alu -11 300 1 597 273 57 84 chr5 196553036 196553209 -3076941 + L1ME3A LINE L1 5359 5535 -635 821 167 0 167 chr5 196553217 196553577 -3076573 + AluY SINE Alu 1 300 -1 597 273 57 84 chr5 196553275 196553586 -3076564 + L1ME3A LINE L1 5535 5515 -655 2041 103 17 3 chr5 196553586 196553877 -3076273 + AluSp SINE Alu 9 303 -10 597 273 57 84 chr5 196553877 196554336 -3075814 + L1ME3A LINE L1 5514 5984 -186 251 343 15 30 chr5 196556012 196556146 -3074004 + MIR3 SINE MIR 1 132 -76 232 351 88 31 chr5 196556523 196556896 -3073254 + L2 LINE L2 2293 2760 -554 2411 74 0 10 chr5 196558097 196558407 -3071743 + AluY SINE Alu 1 307 -4 2201 116 0 0 chr5 196558419 196558729 -3071421 + AluSx SINE Alu 3 312 0 1558 173 69 0 chr5 196559551 196559840 -3070310 + AluJo SINE Alu 1 309 -3 297 369 13 0 chr5 196559939 196560096 -3070054 - Charlie8 DNA MER1_type -2152 265 107 2047 111 18 0 chr5 196560106 196560386 -3069764 + AluSg SINE Alu 1 285 -25 419 300 0 0 chr5 196560391 196560481 -3069669 + L1MC4 LINE L1 6614 6703 -1339 441 226 0 59 chr5 196560490 196560592 -3069558 - L1MC4 LINE L1 -1339 6703 6608 873 188 0 62 chr5 196560652 196560828 -3069322 + FRAM SINE Alu 2 166 0 1856 88 75 21 chr5 196560895 196561226 -3068924 - THE1C LTR MaLR -1 374 26 2029 94 37 10 chr5 196561226 196561523 -3068627 + AluSx SINE Alu 1 305 -7 1284 200 46 98 chr5 196561725 196562166 -3067984 - MLT1C LTR MaLR -7 460 44 2376 58 10 0 chr5 196562166 196562460 -3067690 - AluY SINE Alu -14 297 1 1284 200 46 98 chr5 196562460 196562497 -3067653 - MLT1C LTR MaLR -423 44 7 277 291 190 19 chr5 196562526 196562684 -3067466 - L2 LINE L2 -339 2975 2791 207 283 33 33 chr5 196563000 196563092 -3067058 - L2 LINE L2 -521 2793 2702 2152 65 58 3 chr5 196563654 196563948 -3066202 - AluY SINE Alu -1 310 1 1668 165 0 7 chr5 196564052 196564360 -3065790 - AluSx SINE Alu 0 306 1 286 305 55 8 chr5 196564995 196565123 -3065027 - Charlie8 DNA MER1_type -2150 267 134 1730 94 0 4 chr5 196565245 196565480 -3064670 + AluSx SINE Alu 62 295 -17 1172 167 44 0 chr5 196565493 196565697 -3064453 + AluJb SINE Alu 90 302 -10 186 102 20 41 chr5 196567178 196567227 -3062923 + (CAATA)n Simple_repeat Simple_repeat 1 48 0 621 258 31 6 chr5 196567525 196567684 -3062466 - MIR SINE MIR -71 191 29 463 303 191 15 chr5 196567920 196568332 -3061818 - L2 LINE L2 -1 3271 2783 1638 180 13 10 chr5 196568340 196568640 -3061510 - AluJb SINE Alu -11 301 1 2132 115 7 0 chr5 196569052 196569356 -3060794 - AluSg SINE Alu -4 306 1 370 336 58 12 chr5 196570369 196570591 -3059559 - MIR SINE MIR -10 252 23 363 292 139 0 chr5 196571718 196571862 -3058288 + L2 LINE L2 3106 3269 -3 2364 85 0 0 chr5 196571997 196572302 -3057848 + AluSg SINE Alu 1 305 -5 297 344 23 0 chr5 196573719 196573850 -3056300 - L2 LINE L2 -558 2756 2623 432 338 32 6 chr5 196573898 196574064 -3056086 + MIR SINE MIR 42 210 -52 191 344 178 12 chr5 196574348 196574511 -3055639 + MIR SINE MIR 40 229 -33 460 178 168 0 chr5 196574740 196574847 -3055303 + MER5A DNA MER1_type 4 128 -61 503 319 56 46 chr5 196575047 196575263 -3054887 + MIR SINE MIR 20 237 -25 802 159 65 0 chr5 196576608 196576746 -3053404 + AluSq/x SINE Alu 1 147 -165 2102 102 0 3 chr5 196576748 196577031 -3053119 + AluSg SINE Alu 3 284 -26 506 256 80 20 chr5 196577182 196577381 -3052769 - L2 LINE L2 -1207 2107 1897 201 309 85 32 chr5 196577494 196577588 -3052562 + MIR SINE MIR 92 190 -72 312 281 284 29 chr5 196577697 196578007 -3052143 + L2 LINE L2 2564 2952 -362 2089 112 7 7 chr5 196578047 196578350 -3051800 - AluSx SINE Alu -9 303 1 223 338 103 7 chr5 196578375 196578511 -3051639 + L2 LINE L2 2962 3110 -162 196 335 121 22 chr5 196578631 196578813 -3051337 - MIR SINE MIR -61 201 2 1193 151 14 28 chr5 196579302 196579520 -3050630 - AluJo SINE Alu -13 299 85 937 223 38 17 chr5 196579632 196579870 -3050280 - MIR SINE MIR 0 262 20 232 27 54 0 chr5 196581344 196581381 -3048769 + (CGTG)n Simple_repeat Simple_repeat 3 41 0 35 0 0 0 chr5 196581397 196581432 -3048718 + GC_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr5 196581763 196581799 -3048351 + GC_rich Low_complexity Low_complexity 1 36 0 321 340 94 13 chr5 196582194 196582353 -3047797 - MIR3 SINE MIR -7 201 30 603 82 0 35 chr5 196582604 196582689 -3047461 - AluS SINE Alu -230 82 1 861 97 21 7 chr5 196582726 196582870 -3047280 - L1MB3 LINE L1 0 6183 6038 741 191 109 7 chr5 196582980 196583127 -3047023 - AluJb SINE Alu -14 298 137 225 65 0 0 chr5 196583164 196583195 -3046955 + (TG)n Simple_repeat Simple_repeat 1 31 0 185 138 0 0 chr5 196583580 196583609 -3046541 - MIR SINE MIR -187 75 47 371 303 79 22 chr5 196583616 196583796 -3046354 - MER20B DNA MER1_type -4 215 25 389 260 41 24 chr5 196584367 196584490 -3045660 + MIR SINE MIR 46 170 -92 2042 73 3 138 chr5 196584942 196585296 -3044854 - AluSp SINE Alu -7 306 1 634 257 152 6 chr5 196585583 196585917 -3044233 + MLT1G1 LTR MaLR 2 316 -214 265 246 41 49 chr5 196585906 196585962 -3044188 + MLT1G1 LTR MaLR 424 479 -70 * 1199 197 115 36 chr5 196585962 196586241 -3043909 - AluJb SINE Alu -1 301 1 265 246 41 49 chr5 196586241 196586306 -3043844 + MLT1G1 LTR MaLR 479 544 -5 248 294 37 46 chr5 196586308 196586417 -3043733 - MIR SINE MIR -71 137 30 224 328 129 9 chr5 196590021 196590137 -3040013 - MIR SINE MIR -22 240 111 1573 156 76 4 chr5 196590345 196590621 -3039529 + AluJo SINE Alu 1 296 -16 217 238 0 0 chr5 196592188 196592230 -3037920 + (TCCA)n Simple_repeat Simple_repeat 1 42 0 2030 115 28 3 chr5 196592300 196592587 -3037563 + AluSx SINE Alu 1 294 -18 965 159 12 6 chr5 196592587 196592750 -3037400 + AluJo SINE Alu 1 164 -148 473 149 0 14 chr5 196593495 196593569 -3036581 + AluY SINE Alu 212 284 -27 459 289 40 0 chr5 196594218 196594370 -3035780 - MIR SINE MIR -91 171 14 203 0 37 0 chr5 196595938 196595965 -3034185 + (CA)n Simple_repeat Simple_repeat 2 29 0 279 79 0 0 chr5 196596312 196596350 -3033800 + (CA)n Simple_repeat Simple_repeat 1 38 0 330 306 66 25 chr5 196596648 196596769 -3033381 - MIR SINE MIR -64 144 19 418 184 31 202 chr5 196596892 196597052 -3033098 + L1M4 LINE L1 2644 2830 -3316 1693 102 16 0 chr5 196597052 196597297 -3032853 + AluSx SINE Alu 55 303 -9 418 184 31 202 chr5 196597297 196597321 -3032829 + L1M4 LINE L1 2830 2856 -3290 2133 122 0 0 chr5 196597321 196597617 -3032533 - AluSg SINE Alu -14 296 1 418 184 31 202 chr5 196597617 196597882 -3032268 + L1M4 LINE L1 2856 3017 -3129 1177 139 11 112 chr5 196597887 196598174 -3031976 - L1PA16 LINE L1 -21 6145 5888 2209 94 0 16 chr5 196598196 196598514 -3031636 - AluSq SINE Alu 0 313 1 746 202 12 68 chr5 196598516 196598706 -3031444 - MER58 DNA MER1_type -36 2384 2185 1814 116 51 18 chr5 196598706 196599019 -3031131 - AluSx SINE Alu 0 322 1 746 202 12 68 chr5 196599019 196599130 -3031020 - MER58 DNA MER1_type -235 2185 1 413 189 0 0 chr5 196599130 196599202 -3030948 + MER3 DNA MER1_type 40 111 -98 594 286 58 7 chr5 196599209 196599363 -3030787 + FRAM SINE Alu 7 168 -8 306 330 47 0 chr5 196599387 196599493 -3030657 + L1M4 LINE L1 3082 3192 -2954 236 98 0 24 chr5 196599493 196599534 -3030616 + (GGGA)n Simple_repeat Simple_repeat 3 42 0 486 127 123 158 chr5 196599544 196599734 -3030416 + MER33 DNA MER1_type 52 232 -2353 1747 193 92 41 chr5 196599734 196600169 -3029981 - MSTB2 LTR MaLR 0 457 1 486 127 123 158 chr5 196600169 196600238 -3029912 + MER33 DNA MER1_type 232 302 -22 478 121 0 0 chr5 196600563 196600629 -3029521 + AluJ/FLAM SINE Alu 1 66 -246 1725 199 7 0 chr5 196601683 196601985 -3028165 + AluJo SINE Alu 1 304 -8 359 247 52 0 chr5 196601997 196602094 -3028056 + Charlie8 DNA MER1_type 86 187 -2230 219 286 0 0 chr5 196602183 196602239 -3027911 + MIR3 SINE MIR 150 205 -3 180 341 11 34 chr5 196603348 196603436 -3026714 + MIR3 SINE MIR 88 173 -35 243 326 22 0 chr5 196603581 196603673 -3026477 - MIR SINE MIR -80 182 89 231 319 14 0 chr5 196603971 196604043 -3026107 - L3 LINE CR1 -89 1488 1416 215 297 51 115 chr5 196604387 196604683 -3025467 + L2 LINE L2 2995 3271 -1 2019 122 3 7 chr5 196606588 196606884 -3023266 + AluSx SINE Alu 17 311 -1 308 307 60 38 chr5 196607347 196607588 -3022562 + MIR3 SINE MIR 2 241 -21 2151 98 0 62 chr5 196607691 196608016 -3022134 - AluSx SINE Alu -7 305 1 500 292 69 19 chr5 196608078 196608393 -3021757 + L2 LINE L2 2801 3132 -181 746 244 95 96 chr5 196609123 196609633 -3020517 + L1ME4a LINE L1 5381 5933 -188 266 163 0 0 chr5 196609633 196609676 -3020474 - tRNA-Met-e tRNA tRNA -32 43 1 746 244 95 96 chr5 196609676 196609861 -3020289 + L1ME4a LINE L1 5933 6117 -4 201 109 0 43 chr5 196610213 196610259 -3019891 + (CAAA)n Simple_repeat Simple_repeat 4 47 0 279 0 0 0 chr5 196612127 196612158 -3017992 + (TGGA)n Simple_repeat Simple_repeat 4 34 0 399 304 89 16 chr5 196612724 196612908 -3017242 + MIR SINE MIR 2 199 -63 411 312 115 6 chr5 196613419 196613576 -3016574 + MIR SINE MIR 24 197 -65 373 241 160 0 chr5 196613710 196613848 -3016302 - MLT1G LTR MaLR 0 581 430 538 281 82 6 chr5 196613877 196614048 -3016102 + MIR SINE MIR 44 227 -35 579 287 37 6 chr5 196614448 196614612 -3015538 + MIR SINE MIR 20 188 -74 243 146 0 0 chr5 196615044 196615085 -3015065 + (CA)n Simple_repeat Simple_repeat 2 42 0 2188 90 7 10 chr5 196615102 196615402 -3014748 + AluSx SINE Alu 1 299 -13 289 333 108 0 chr5 196616373 196616493 -3013657 + MIR SINE MIR 65 197 -65 1736 74 126 19 chr5 196616497 196616626 -3013524 + AluSg1 SINE Alu 1 115 -194 195 42 0 0 chr5 196616626 196616650 -3013500 + (TAA)n Simple_repeat Simple_repeat 2 25 0 1736 74 126 19 chr5 196616650 196616789 -3013361 + AluSg1 SINE Alu 115 298 -11 1628 188 40 122 chr5 196617107 196617687 -3012463 - L1MD1 LINE L1 -15 6227 5696 416 320 17 6 chr5 196618301 196618476 -3011674 + (CCCCAA)n Simple_repeat Simple_repeat 3 179 0 250 284 21 43 chr5 196618562 196618703 -3011447 + (CCCTAA)n Simple_repeat Simple_repeat 1 138 0 294 328 111 6 chr5 196618976 196619147 -3011003 + MIR SINE MIR 63 251 -11 221 289 9 79 chr5 196619874 196619988 -3010162 + MIR SINE MIR 96 201 -61 2037 131 10 10 chr5 196620011 196620323 -3009827 - AluSx SINE Alu 0 312 1 2751 166 69 44 chr5 196620324 196620641 -3009509 - L1MC1 LINE L1 -5 6328 6020 2206 107 3 3 chr5 196620641 196620941 -3009209 - AluSx SINE Alu -12 300 1 2751 166 69 44 chr5 196620941 196621278 -3008872 - L1MC1 LINE L1 -313 6020 5658 224 98 0 24 chr5 196621985 196622026 -3008124 + (TTCA)n Simple_repeat Simple_repeat 2 41 0 416 209 101 16 chr5 196622069 196622198 -3007952 + MER5A DNA MER1_type 50 189 0 1973 124 3 23 chr5 196622288 196622594 -3007556 + AluSx SINE Alu 4 303 -9 1291 164 5 9 chr5 196622594 196622808 -3007342 + AluJo SINE Alu 85 297 -15 2264 72 7 0 chr5 196622819 196623112 -3007038 + AluY SINE Alu 9 303 -8 387 0 0 0 chr5 196623247 196623290 -3006860 + (TA)n Simple_repeat Simple_repeat 1 43 0 1053 155 78 36 chr5 196623290 196623483 -3006667 - AluJo SINE Alu -27 285 85 690 158 17 8 chr5 196623483 196623603 -3006547 - FAM SINE Alu -60 125 5 334 287 112 16 chr5 196626092 196626280 -3003870 + Charlie8 DNA MER1_type 1 206 -2211 531 179 0 0 chr5 196628615 196628755 -3001395 + (TG)n Simple_repeat Simple_repeat 2 141 0 243 208 38 0 chr5 196630543 196630596 -2999554 + G-rich Low_complexity Low_complexity 6 60 0 237 343 71 0 chr5 196631070 196631169 -2998981 - MIR SINE MIR -80 182 77 194 300 14 29 chr5 196631852 196631922 -2998228 + MIR SINE MIR 79 147 -115 225 0 0 0 chr5 196632099 196632124 -2998026 + (TG)n Simple_repeat Simple_repeat 2 26 0 664 252 32 7 chr5 196632149 196632304 -2997846 - FRAM SINE Alu -11 165 7 2440 70 0 0 chr5 196632310 196632612 -2997538 - AluSx SINE Alu -10 302 1 194 253 21 84 chr5 196633391 196633486 -2996664 - MIR SINE MIR -71 191 103 1658 228 30 24 chr5 196633499 196633965 -2996185 + L1MB3 LINE L1 5715 6183 0 340 299 56 9 chr5 196634093 196634200 -2995950 - MIR SINE MIR -141 121 10 670 287 90 9 chr5 196635241 196635464 -2994686 - MIR SINE MIR -9 253 13 265 288 116 7 chr5 196635936 196636082 -2994068 - MIR SINE MIR -37 225 64 198 0 0 0 chr5 196636342 196636364 -2993786 + (T)n Simple_repeat Simple_repeat 1 22 0 226 324 99 9 chr5 196637538 196637649 -2992501 + MIR SINE MIR 132 252 -10 287 378 14 14 chr5 196637929 196638077 -2992073 - MER5A DNA MER1_type -3 186 39 1977 133 84 35 chr5 196638289 196638635 -2991515 - THE1B LTR MaLR -1 363 1 1627 108 4 9 chr5 196639223 196639454 -2990696 + AluSq SINE Alu 16 245 -68 853 274 16 18 chr5 196639858 196640167 -2989983 - L1MC4a LINE L1 -297 5824 5522 1654 219 72 0 chr5 196641011 196641371 -2988779 - MLT1B LTR MaLR -4 386 1 211 347 141 22 chr5 196642724 196643001 -2987149 - L2 LINE L2 -31 3241 2932 263 160 20 0 chr5 196645079 196645129 -2985021 - MER3 DNA MER1_type 0 209 159 2406 75 3 0 chr5 196645142 196645450 -2984700 - AluSc SINE Alu 0 309 1 1058 182 106 46 chr5 196645462 196645764 -2984386 - L1MB7 LINE L1 -16 6168 5849 402 207 81 0 chr5 196645764 196645851 -2984299 - MER3 DNA MER1_type -81 128 82 2081 121 0 7 chr5 196646517 196646853 -2983297 + AluSx SINE Alu 1 334 0 2323 67 0 30 chr5 196647232 196647532 -2982618 + AluY SINE Alu 3 293 -18 1630 183 53 41 chr5 196648333 196648439 -2981711 - MER2 DNA MER2_type 0 344 241 2198 96 0 20 chr5 196648439 196648741 -2981409 - AluSx SINE Alu -16 296 1 1630 183 53 41 chr5 196648741 196648972 -2981178 - MER2 DNA MER2_type -103 241 3 2241 87 0 7 chr5 196649134 196649432 -2980718 + AluSc SINE Alu 1 296 -13 342 286 68 83 chr5 196649958 196650294 -2979856 - HAL1 LINE L1 -846 1661 1331 521 323 108 20 chr5 196650984 196651390 -2978760 - L2 LINE L2 -42 3271 2830 34 24 0 0 chr5 196851599 196851640 -2778510 + AT_rich Low_complexity Low_complexity 1 41 0 201 162 0 0 chr5 196851685 196851722 -2778428 + T-rich Low_complexity Low_complexity 5 41 0 3603 102 11 15 chr5 196851904 196852425 -2777725 + MER4D LTR ERV1 3 521 -351 2231 92 7 0 chr5 196852544 196852837 -2777313 - AluY SINE Alu -16 295 1 1023 122 26 63 chr5 196852837 196853026 -2777124 + MER4D LTR ERV1 547 728 -175 2570 49 0 3 chr5 196853203 196853507 -2776643 - AluY SINE Alu -8 303 1 989 170 6 0 chr5 196853509 196853674 -2776476 - FRAM SINE Alu 0 166 1 1833 138 117 12 chr5 196853692 196854018 -2776132 - MER4B LTR ERV1 -250 360 1 1591 194 26 24 chr5 196854018 196854357 -2775793 + MLT1B LTR MaLR 51 390 0 1837 244 31 16 chr5 196854874 196855324 -2774826 - L1ME LINE L1 -5609 461 5 189 74 0 0 chr5 196855352 196855379 -2774771 + (A)n Simple_repeat Simple_repeat 1 27 0 2490 78 0 10 chr5 196855596 196855905 -2774245 + AluY SINE Alu 1 306 -5 23 0 0 0 chr5 196856066 196856089 -2774061 + AT_rich Low_complexity Low_complexity 1 23 0 1690 129 0 0 chr5 196856195 196856427 -2773723 + AluSg/x SINE Alu 71 302 -10 734 235 50 5 chr5 196856431 196856631 -2773519 - MER34B LTR ERV1 -82 483 275 2681 114 41 41 chr5 196856671 196857136 -2773014 - MER4C LTR ERV1 0 465 1 484 96 4 50 chr5 196857223 196857322 -2772828 - MER34C LTR ERV1 -479 100 1 1599 170 13 13 chr5 196857324 196857630 -2772520 - L1MC3 LINE L1 -138 7647 7342 1342 70 0 0 chr5 196857946 196858104 -2772046 - AluSg SINE Alu -108 202 45 268 236 0 0 chr5 196858412 196858467 -2771683 - MIR SINE MIR -33 229 175 880 219 69 71 chr5 196858566 196858956 -2771194 - MER74A LTR ERVL -85 473 85 259 103 26 0 chr5 196858956 196858995 -2771155 + AluSg1 SINE Alu 1 40 -263 407 126 4 9 chr5 196859195 196859277 -2770873 + AluSg1 SINE Alu 1 53 -249 341 250 10 20 chr5 196859406 196859506 -2770644 + L1MEc LINE L1 49 147 -6249 897 297 4 0 chr5 196859551 196859817 -2770333 + L1MEc LINE L1 248 514 -5882 1678 181 13 17 chr5 196860117 196860415 -2769735 + AluJb SINE Alu 1 297 -15 26 0 0 0 chr5 196860675 196860701 -2769449 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 196861143 196861171 -2768979 + AT_rich Low_complexity Low_complexity 1 28 0 1924 111 0 28 chr5 196861303 196861591 -2768559 + AluSg1 SINE Alu 30 309 0 383 211 21 28 chr5 196861592 196861700 -2768450 + L1MC4 LINE L1 7476 7676 -319 457 215 174 86 chr5 196862492 196862958 -2767192 + MLT1G3 LTR MaLR 1 537 -5 2174 121 7 7 chr5 196863014 196863320 -2766830 - AluSc SINE Alu -3 306 1 638 174 33 8 chr5 196863425 196863546 -2766604 - FLAM_A SINE Alu -5 128 5 454 258 113 11 chr5 196863546 196863732 -2766418 - L1ME3 LINE L1 -304 5858 5654 2039 71 36 14 chr5 196863871 196864151 -2765999 + AluY SINE Alu 13 298 -13 575 263 77 34 chr5 196864178 196864387 -2765763 + L1MEc LINE L1 41 258 -6138 1129 127 12 6 chr5 196864485 196864658 -2765492 - AluSg/x SINE Alu -5 305 132 2032 108 11 4 chr5 196864658 196864936 -2765214 - AluSq SINE Alu -5 308 29 1422 184 6 75 chr5 196864936 196865211 -2764939 + L1ME LINE L1 5042 5291 -875 2133 133 17 0 chr5 196865211 196865512 -2764638 - AluSx SINE Alu -6 306 1 1422 184 6 75 chr5 196865512 196865667 -2764483 + L1ME LINE L1 5291 5455 -711 473 186 34 59 chr5 196865668 196865786 -2764364 + MLT1D LTR MaLR 1 115 -390 2817 201 60 46 chr5 196865803 196866307 -2763843 + L1MC3 LINE L1 6519 7014 -771 324 0 0 0 chr5 196866307 196866343 -2763807 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 2817 201 60 46 chr5 196866343 196866381 -2763769 + L1MC3 LINE L1 7014 7050 -735 2055 108 14 0 chr5 196866381 196866683 -2763467 + AluSx SINE Alu 1 306 0 2817 201 60 46 chr5 196866683 196866854 -2763296 + L1MC3 LINE L1 7050 7244 -541 1308 111 79 0 chr5 196866954 196867143 -2763007 + AluSc SINE Alu 106 309 0 286 276 71 24 chr5 196867349 196867519 -2762631 + HAL1 LINE L1 961 1138 -1369 586 229 161 96 chr5 196867539 196867924 -2762226 + L2 LINE L2 2900 3309 -4 275 267 33 22 chr5 196868049 196868139 -2762011 + L1ME LINE L1 5569 5659 -462 2662 61 0 0 chr5 196868303 196868614 -2761536 + AluY SINE Alu 1 311 0 259 266 13 0 chr5 196869124 196869203 -2760947 - MIR SINE MIR -8 254 175 592 214 21 29 chr5 196870139 196870279 -2759871 - LTR53 LTR ERVL 0 519 381 2141 123 10 0 chr5 196870296 196870605 -2759545 - AluSx SINE Alu 0 312 1 278 295 116 5 chr5 196870836 196871026 -2759124 - L1ME LINE L1 -670 5492 5282 1940 134 24 3 chr5 196871349 196871640 -2758510 - AluSx SINE Alu -15 297 1 368 223 66 0 chr5 196871752 196871873 -2758277 - L1 LINE L1 -2375 3771 3643 2320 75 0 39 chr5 196872249 196872555 -2757595 - AluY SINE Alu -17 294 1 2231 112 0 0 chr5 196873967 196874261 -2755889 + AluSc SINE Alu 1 294 -15 437 296 120 22 chr5 196874261 196874619 -2755531 + L1M4 LINE L1 2186 2578 -3568 2308 88 14 0 chr5 196874642 196874939 -2755211 + AluSp SINE Alu 1 301 -12 1974 169 0 6 chr5 196874945 196875289 -2754861 + AluJo SINE Alu 1 342 0 2580 54 0 0 chr5 196875291 196875587 -2754563 + AluY SINE Alu 1 296 -15 801 250 126 109 chr5 196875700 196876343 -2753807 + L1M4 LINE L1 4673 5326 -820 269 309 105 31 chr5 196876584 196876746 -2753404 + MIR3 SINE MIR 32 205 -3 2290 85 0 3 chr5 196876976 196877286 -2752864 - AluY SINE Alu 0 309 1 1817 185 0 13 chr5 196877502 196877805 -2752345 + AluJo SINE Alu 1 299 -13 185 319 132 19 chr5 196878036 196878249 -2751901 - L2 LINE L2 -787 2527 2291 2181 102 20 10 chr5 196878470 196878594 -2751556 + AluY SINE Alu 1 122 -189 189 0 0 0 chr5 196878594 196878615 -2751535 + (CA)n Simple_repeat Simple_repeat 2 22 0 2181 102 20 10 chr5 196878615 196878784 -2751366 + AluY SINE Alu 122 297 -14 459 273 44 62 chr5 196879094 196879321 -2750829 - MLT1J LTR MaLR -190 321 99 1882 222 121 74 chr5 196879979 196880683 -2749467 - MER21B LTR ERV1 -81 782 46 307 262 71 0 chr5 196880715 196880799 -2749351 - MER21B LTR ERV1 -773 90 1 3048 128 24 26 chr5 196880860 196881351 -2748799 - LTR2B LTR ERV1 0 490 1 5125 86 0 8 chr5 196881351 196882018 -2748132 - Harlequin LTR ERV1 0 6896 6235 2139 137 3 0 chr5 196883272 196883579 -2746571 + AluSx SINE Alu 3 310 -2 206 169 34 34 chr5 196883650 196883709 -2746441 + A-rich Low_complexity Low_complexity 3 61 0 379 320 20 0 chr5 196884843 196884990 -2745160 + MER91A DNA MER1_type 2 151 -45 262 185 92 46 chr5 196885075 196885140 -2745010 + Alu SINE Alu 56 123 -177 1778 80 0 4 chr5 196886071 196886310 -2743840 + LTR19B LTR ERV1 1 238 -342 933 123 65 0 chr5 196886307 196886462 -2743688 + LTR19B LTR ERV1 416 580 0 * 319 77 26 39 chr5 196886625 196886696 -2743454 + (TA)n Simple_repeat Simple_repeat 1 72 -5 2435 79 0 13 chr5 196886696 196887001 -2743149 - AluY SINE Alu -10 301 1 319 77 26 39 chr5 196887001 196887007 -2743143 + (TA)n Simple_repeat Simple_repeat 72 77 0 316 86 0 103 chr5 196888030 196888088 -2742062 + L1ME1 LINE L1 5912 5963 -203 * 2326 143 33 0 chr5 196888076 196888528 -2741622 + L1MB4 LINE L1 5657 6171 -9 3779 89 18 4 chr5 196888638 196889142 -2741008 - MER9 LTR ERVK 0 511 1 1043 265 90 34 chr5 196889328 196889620 -2740530 + L1MC4 LINE L1 6905 7179 -816 2224 116 0 3 chr5 196889620 196889922 -2740228 - AluSp SINE Alu -7 306 6 1043 265 90 34 chr5 196889922 196889996 -2740154 + L1MC4 LINE L1 7179 7247 -748 1669 175 29 0 chr5 196889996 196890276 -2739874 - AluJo SINE Alu -24 288 1 1043 265 90 34 chr5 196890276 196890527 -2739623 + L1MC4 LINE L1 7247 7575 -420 1994 136 0 28 chr5 196890527 196890844 -2739306 + AluSg1 SINE Alu 1 308 -1 1043 265 90 34 chr5 196890844 196890953 -2739197 + L1MC4 LINE L1 7575 7676 -319 975 163 11 49 chr5 196891576 196891760 -2738390 - AluJb SINE Alu -2 310 134 299 248 105 19 chr5 196891762 196891786 -2738364 - MER58B DNA MER1_type -2090 330 309 1300 211 181 28 chr5 196891786 196892218 -2737932 + MLT1D LTR MaLR 5 502 -3 299 248 105 19 chr5 196892218 196892298 -2737852 - MER58B DNA MER1_type -2111 309 217 378 0 0 0 chr5 196892625 196892667 -2737483 + (CA)n Simple_repeat Simple_repeat 2 43 0 465 268 61 45 chr5 196892710 196892850 -2737300 + L1ME3 LINE L1 4885 5021 -1125 2064 148 125 10 chr5 196892850 196893234 -2736916 - MSTA LTR MaLR 0 428 1 465 268 61 45 chr5 196893234 196893403 -2736747 + L1ME3 LINE L1 5021 5199 -947 225 227 15 45 chr5 196893397 196893463 -2736687 + L1MC5 LINE L1 7827 7890 -71 * 1214 267 102 17 chr5 196893480 196894198 -2735952 + L1ME3 LINE L1 5175 5953 -209 2412 46 0 4 chr5 196894315 196894633 -2735517 - AluY SINE Alu 0 321 5 331 352 31 5 chr5 196894735 196894928 -2735222 + L1ME3A LINE L1 2176 2373 -4023 374 264 19 38 chr5 196894941 196895047 -2735103 + L1M4 LINE L1 353 456 -6086 * 3863 234 82 75 chr5 196895017 196895204 -2734946 + L1M4 LINE L1 3779 3963 -2681 2541 81 0 0 chr5 196895204 196895511 -2734639 + AluY SINE Alu 1 307 -4 3863 234 82 75 chr5 196895511 196897269 -2732881 + L1M4 LINE L1 3963 5738 -906 2903 160 92 7 chr5 196897422 196897986 -2732164 - ERVL LTR ERVL 0 5764 5153 648 148 0 17 chr5 196898015 196898130 -2732020 - L1M4 LINE L1 -1110 5036 4924 216 234 181 11 chr5 196898139 196898233 -2731917 - L2 LINE L2 -264 3049 2940 1058 267 169 21 chr5 196898871 196899432 -2730718 + L1ME3A LINE L1 3650 4293 -1922 556 14 14 14 chr5 196899467 196899541 -2730609 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 1906 214 14 64 chr5 196899575 196900076 -2730074 - MLT2B1 LTR ERVL -40 480 5 1139 286 62 36 chr5 196900103 196901227 -2728923 + L1ME3A LINE L1 4368 5519 -714 356 115 19 0 chr5 196901416 196901468 -2728682 + MER4A LTR ERV1 261 313 -351 2039 137 13 0 chr5 196901504 196901803 -2728347 + AluSx SINE Alu 7 309 -3 1716 130 41 19 chr5 196901803 196902073 -2728077 + MER4A LTR ERV1 389 664 0 453 258 14 7 chr5 196902172 196902342 -2727808 + L1ME3A LINE L1 5800 5971 -260 201 259 74 0 chr5 196902484 196902538 -2727612 - MIR SINE MIR -1 261 204 1940 172 30 22 chr5 196902538 196902953 -2727197 - LTR27 LTR ERV1 0 501 110 211 309 36 0 chr5 196903008 196903092 -2727058 - MIR SINE MIR -56 206 120 247 211 120 114 chr5 196903220 196903395 -2726755 + HAL1 LINE L1 2330 2505 -2 652 190 128 11 chr5 196903644 196903823 -2726327 - LTR37A LTR ERV1 -18 408 209 2272 85 0 0 chr5 196903954 196904259 -2725891 + AluY SINE Alu 1 305 -6 2004 240 88 44 chr5 196904405 196904974 -2725176 - HAL1 LINE L1 -585 1922 1307 1814 128 3 80 chr5 196904974 196905311 -2724839 + AluSq SINE Alu 3 313 0 2004 240 88 44 chr5 196905311 196905536 -2724614 - HAL1 LINE L1 -1200 1307 1093 270 335 18 0 chr5 196905543 196905570 -2724580 - L1MA10 LINE L1 -2 6332 6306 2162 231 44 38 chr5 196905570 196906203 -2723947 - L1ME1 LINE L1 -21 6214 5578 2023 248 83 22 chr5 196906196 196907101 -2723049 - L1ME1 LINE L1 -1994 4221 92 * 538 240 125 48 chr5 196907112 196907424 -2722726 - HAL1 LINE L1 -1400 1107 772 195 42 0 0 chr5 196907510 196907534 -2722616 + (A)n Simple_repeat Simple_repeat 1 24 0 1225 75 0 0 chr5 196907652 196907868 -2722282 - AluY SINE Alu 0 311 133 2369 78 0 0 chr5 196907868 196908177 -2721973 - AluSc SINE Alu 0 309 1 1878 77 0 0 chr5 196908393 196908640 -2721510 - AluY SINE Alu 0 311 65 1914 245 87 4 chr5 196909137 196909667 -2720483 - L1ME3A LINE L1 -36 6134 5561 2425 42 6 6 chr5 196909993 196910304 -2719846 - AluY SINE Alu 0 311 1 1049 75 0 0 chr5 196910304 196910438 -2719712 - AluY SINE Alu -177 134 1 1258 155 3 134 chr5 196910438 196910773 -2719377 - AluJb SINE Alu -10 292 2 309 244 44 22 chr5 196910941 196911031 -2719119 - HAL1 LINE L1 -922 1585 1494 1056 105 25 0 chr5 196911185 196911347 -2718803 - AluSg/x SINE Alu -13 299 134 377 279 30 133 chr5 196911489 196911790 -2718360 - HAL1 LINE L1 -1040 1467 1198 36 0 0 0 chr5 196912009 196912045 -2718105 + AT_rich Low_complexity Low_complexity 1 36 0 811 183 102 61 chr5 196912060 196912306 -2717844 - L1M3 LINE L1 -542 5641 5386 221 328 0 0 chr5 196912506 196912573 -2717577 - L2 LINE L2 -12 3260 3194 2007 96 4 4 chr5 196912711 196913019 -2717131 - AluSg SINE Alu 0 308 1 1553 136 115 14 chr5 196914816 196915095 -2715055 - AluSg SINE Alu -3 307 1 773 85 9 0 chr5 196915266 196915372 -2714778 - AluY SINE Alu -203 108 2 295 313 76 108 chr5 196915415 196915664 -2714486 - MIR SINE MIR -14 248 8 1757 108 100 0 chr5 196915781 196916050 -2714100 + AluSx SINE Alu 1 296 -16 540 209 61 68 chr5 196916293 196916456 -2713694 + L2 LINE L2 2670 2831 -483 1278 126 5 15 chr5 196916458 196916657 -2713493 + MLT2C1 LTR ERVL 2 198 -199 1032 245 113 56 chr5 196916743 196917204 -2712946 + L2 LINE L2 2827 3313 0 226 210 140 0 chr5 196917412 196917476 -2712674 - MIR SINE MIR -94 114 41 1666 189 76 12 chr5 196917935 196918278 -2711872 + MLT1A1 LTR MaLR 1 365 0 1807 143 3 51 chr5 196918325 196918640 -2711510 - AluSx SINE Alu -12 300 1 1728 155 44 0 chr5 196919725 196920022 -2710128 + AluJo SINE Alu 1 310 -2 1190 88 5 49 chr5 196921375 196921580 -2708570 - AluSg/x SINE Alu -3 307 112 1712 164 0 27 chr5 196921840 196922139 -2708011 - AluJo SINE Alu -21 291 1 2132 81 7 3 chr5 196922149 196922432 -2707718 - AluSx SINE Alu -8 304 21 1171 282 128 40 chr5 196922456 196922956 -2707194 + MLT1G1 LTR MaLR 1 544 -51 1843 227 130 10 chr5 196923037 196923876 -2706274 + L1MEc LINE L1 1242 2071 -4144 * 3298 184 50 36 chr5 196923871 196924301 -2705849 + L1MC3 LINE L1 6992 7439 -346 2024 133 7 0 chr5 196924301 196924609 -2705541 + AluSx SINE Alu 1 310 -2 3298 184 50 36 chr5 196924609 196924961 -2705189 + L1MC3 LINE L1 7439 7785 0 2246 59 7 0 chr5 196925302 196925591 -2704559 + AluY SINE Alu 1 291 -20 812 208 6 22 chr5 196925603 196925786 -2704364 + FRAM SINE Alu 1 176 0 257 294 0 0 chr5 196926140 196926208 -2703942 - MIR SINE MIR 0 262 195 537 167 174 14 chr5 196926258 196926396 -2703754 + MIR SINE MIR 77 236 -26 1653 155 17 21 chr5 196926448 196926739 -2703411 - AluJo SINE Alu -22 290 1 470 303 97 0 chr5 196926750 196926915 -2703235 - MIR SINE MIR -76 186 6 372 231 98 67 chr5 196928337 196928562 -2701588 + MER74A LTR ERVL 297 528 -30 258 188 58 43 chr5 196928964 196929033 -2701117 - MIR3 SINE MIR -54 154 85 4797 153 27 4 chr5 196929954 196930797 -2699353 - L1MA4A LINE L1 -5 6298 5436 1744 169 14 20 chr5 196930799 196931147 -2699003 + L1 LINE L1 4747 5092 -1054 1346 106 0 0 chr5 196931254 196931433 -2698717 - AluSc SINE Alu -130 179 1 320 247 34 11 chr5 196931770 196931859 -2698291 + L1MC4 LINE L1 6613 6703 -1339 205 209 0 23 chr5 196931860 196931903 -2698247 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 232 233 68 0 chr5 196931911 196931984 -2698166 - L1ME LINE L1 -301 5865 5788 483 276 0 43 chr5 196931986 196932149 -2698001 - L2 LINE L2 0 3313 3158 1902 187 84 75 chr5 196932160 196932730 -2697420 + LTR49 LTR ERV1 1 564 -31 857 275 96 7 chr5 196932749 196933130 -2697020 - L2 LINE L2 -178 3135 2722 1037 201 62 23 chr5 196933131 196933390 -2696760 + MER31B LTR ERV1 6 274 -192 1838 216 32 78 chr5 196933390 196933913 -2696237 + LTR26B LTR ERV1 1 499 -32 8456 202 17 3 chr5 196933936 196935428 -2694722 + HERVE LTR ERV1 1887 3399 -4414 1056 186 73 23 chr5 196935446 196935666 -2694484 - HERVE LTR ERV1 -5174 2639 2409 * 17061 174 6 13 chr5 196935648 196938449 -2691701 + HERVE LTR ERV1 3395 6177 -1636 2410 211 4 4 chr5 196938438 196938927 -2691223 - HERVE LTR ERV1 -1172 5724 5236 * 760 107 0 0 chr5 196938924 196939036 -2691114 + Harlequin LTR ERV1 5809 5920 -976 * 242 303 74 16 chr5 196939835 196939957 -2690193 - MIR SINE MIR -40 222 94 632 291 108 32 chr5 196940106 196940517 -2689633 + Tigger8 DNA MER2_type 183 630 -36 2234 105 0 0 chr5 196940517 196940813 -2689337 + AluSx SINE Alu 1 296 -16 632 291 108 32 chr5 196940813 196940834 -2689316 + Tigger8 DNA MER2_type 630 648 -18 1101 283 115 11 chr5 196941052 196941427 -2688723 + L2 LINE L2 2898 3311 -2 261 361 0 23 chr5 196941424 196941554 -2688596 - L2 LINE L2 -600 2714 2588 * 245 254 136 30 chr5 196942351 196942520 -2687630 - L1M4 LINE L1 -2190 3956 3770 2529 213 87 69 chr5 196942583 196942862 -2687288 - L1ME LINE L1 -4556 1984 1711 1771 155 7 16 chr5 196942862 196943165 -2686985 + AluSx SINE Alu 1 300 -12 2529 213 87 69 chr5 196943165 196943541 -2686609 - L1ME LINE L1 -4829 1711 1343 2267 98 0 0 chr5 196943541 196943837 -2686313 + AluSg SINE Alu 1 296 -14 2529 213 87 69 chr5 196943837 196944270 -2685880 - L1ME LINE L1 -5197 1343 910 291 290 114 26 chr5 196944917 196945119 -2685031 - L1ME LINE L1 -5922 608 1 * 327 228 59 20 chr5 196945103 196945204 -2684946 - L1M4 LINE L1 -3033 3113 3009 315 211 296 0 chr5 196946109 196946251 -2683899 - L1M4 LINE L1 -3128 3018 2835 1943 144 19 3 chr5 196946316 196946635 -2683515 - L1MB3 LINE L1 -14 6169 5846 21 57 0 0 chr5 196946695 196946730 -2683420 + AT_rich Low_complexity Low_complexity 1 35 0 500 235 107 70 chr5 196947169 196947282 -2682868 - MIR SINE MIR -42 220 96 2326 71 0 0 chr5 196947282 196947578 -2682572 + AluY SINE Alu 6 301 -10 500 235 107 70 chr5 196947578 196947651 -2682499 - MIR SINE MIR -166 96 27 1836 123 3 31 chr5 196947743 196948056 -2682094 + AluSq SINE Alu 1 305 0 374 195 16 106 chr5 196948068 196948191 -2681959 - L1ME3A LINE L1 -96 6074 5963 347 184 211 0 chr5 196948296 196948372 -2681778 - L1MC4 LINE L1 -1339 6703 6612 903 309 56 25 chr5 196948385 196949018 -2681132 - L1ME3A LINE L1 -314 5856 5192 1688 175 3 10 chr5 196949018 196949332 -2680818 - AluJb SINE Alu 0 312 1 903 309 56 25 chr5 196949332 196949422 -2680728 - L1ME3A LINE L1 -978 5192 5106 25 0 0 0 chr5 196949441 196949466 -2680684 + AT_rich Low_complexity Low_complexity 1 25 0 2200 80 0 7 chr5 196949704 196950003 -2680147 - AluY SINE Alu -14 297 1 2520 143 14 45 chr5 196950611 196950670 -2679480 - MSTA LTR MaLR 0 428 369 1925 118 30 16 chr5 196950670 196950849 -2679301 - AluSq SINE Alu -5 308 122 441 0 0 0 chr5 196950849 196950898 -2679252 + (TG)n Simple_repeat Simple_repeat 2 50 0 1925 118 30 16 chr5 196950898 196951022 -2679128 - AluSq SINE Alu -191 122 1 2520 143 14 45 chr5 196951022 196951404 -2678746 - MSTA LTR MaLR -59 369 1 8921 166 43 8 chr5 196951409 196953004 -2677146 - MSTA-int LTR MaLR 0 1651 1 2633 143 44 7 chr5 196953004 196953416 -2676734 - MSTA LTR MaLR 0 428 2 2181 135 0 0 chr5 196953501 196953804 -2676346 - AluSx SINE Alu -7 305 3 208 313 130 8 chr5 196953822 196953953 -2676197 - MIR SINE MIR -115 147 1 605 287 100 23 chr5 196956151 196956824 -2673326 - L1MEc LINE L1 -4549 1666 853 264 309 89 8 chr5 196957277 196957400 -2672750 - L1MEc LINE L1 -5935 270 138 613 151 0 0 chr5 196957711 196957797 -2672353 + MER75 DNA T2_type 2 87 -427 2578 48 0 0 chr5 196958229 196958523 -2671627 - AluY SINE Alu -17 294 1 2462 68 0 13 chr5 196960252 196960560 -2669590 + AluY SINE Alu 1 304 -7 2312 106 0 3 chr5 196961831 196962142 -2668008 - AluSg SINE Alu 0 310 1 324 0 0 0 chr5 196962209 196962245 -2667905 + (CA)n Simple_repeat Simple_repeat 1 36 0 1332 70 0 0 chr5 196964661 196964819 -2665331 - AluSg SINE Alu -108 202 45 1075 303 84 36 chr5 196966912 196967800 -2662350 - L2 LINE L2 0 3313 2384 244 299 46 0 chr5 196967800 196967887 -2662263 - L1ME LINE L1 -421 5700 5610 236 295 132 12 chr5 196967916 196968235 -2661915 - L1ME4a LINE L1 0 6121 5765 28 0 0 0 chr5 196969040 196969068 -2661082 + AT_rich Low_complexity Low_complexity 1 28 0 282 296 28 77 chr5 196969298 196969558 -2660592 + HAL1b LINE L1 311 488 -860 265 224 78 106 chr5 196969949 196970128 -2660022 - L1MC4 LINE L1 -3 8039 7866 182 279 115 0 chr5 196971435 196971496 -2658654 - L3 LINE CR1 -5 1572 1505 1830 154 10 36 chr5 196971879 196972185 -2657965 + AluJo SINE Alu 1 298 -14 22 0 0 0 chr5 196972328 196972350 -2657800 + AT_rich Low_complexity Low_complexity 1 22 0 329 256 60 0 chr5 196972393 196972510 -2657640 - L1ME LINE L1 -311 5810 5687 898 182 19 0 chr5 196972676 196972830 -2657320 - Tigger2 DNA MER2_type 0 2718 2562 862 141 91 70 chr5 196972826 196973054 -2657096 - Tigger2 DNA MER2_type -258 2460 1 * 21 82 0 0 chr5 196973209 196973258 -2656892 + AT_rich Low_complexity Low_complexity 1 49 0 3221 95 4 202 chr5 196974786 196975544 -2654606 - LTR14B LTR ERVK 0 608 1 2365 88 3 0 chr5 196975919 196976213 -2653937 - AluY SINE Alu -16 295 1 180 0 0 0 chr5 196976738 196976758 -2653392 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 243 173 37 0 chr5 196976998 196977079 -2653071 + (TA)n Simple_repeat Simple_repeat 2 85 0 25 31 0 0 chr5 196977479 196977511 -2652639 + AT_rich Low_complexity Low_complexity 1 32 0 2206 128 0 6 chr5 196977522 196977835 -2652315 + AluSx SINE Alu 1 311 -1 1866 173 0 10 chr5 196978325 196978638 -2651512 + AluJb SINE Alu 1 310 -2 260 269 101 63 chr5 196979023 196979261 -2650889 + L1ME1 LINE L1 4377 4623 -1523 2273 96 3 3 chr5 196979379 196979682 -2650468 + AluSg SINE Alu 1 303 -7 38 68 0 0 chr5 196979758 196979831 -2650319 + AT_rich Low_complexity Low_complexity 1 73 0 229 188 47 47 chr5 196980065 196980129 -2650021 - L1PA15-16 LINE L1 -6570 279 216 466 265 158 22 chr5 196980231 196980360 -2649790 + L1ME1 LINE L1 4946 5056 -1090 2217 96 0 69 chr5 196980360 196980692 -2649458 - AluSc SINE Alu 0 309 1 466 265 158 22 chr5 196980692 196980917 -2649233 + L1ME1 LINE L1 5056 5348 -798 26 30 0 0 chr5 196981034 196981067 -2649083 + AT_rich Low_complexity Low_complexity 1 33 0 371 241 188 8 chr5 196981388 196981521 -2648629 + L1MC4a LINE L1 5742 5898 -1910 1865 186 117 53 chr5 196981764 196982253 -2647897 + L1MC4 LINE L1 7477 8004 -38 2071 98 0 4 chr5 196982253 196982528 -2647622 - AluSx SINE Alu -38 274 1 1865 186 117 53 chr5 196982528 196982569 -2647581 + L1MC4 LINE L1 8004 8041 -1 1377 214 33 37 chr5 196982660 196983066 -2647084 + MLT1C LTR MaLR 11 467 0 2052 221 100 4 chr5 196983066 196983564 -2646586 + L1ME1 LINE L1 5489 6034 -132 528 219 48 36 chr5 196984034 196984219 -2645931 + L1ME2 LINE L1 5986 6332 -2 224 330 28 19 chr5 196984955 196985061 -2645089 - MIR SINE MIR -9 253 147 356 358 7 20 chr5 196985083 196985234 -2644916 - MIR SINE MIR -79 183 35 2075 116 17 0 chr5 196986094 196986386 -2643764 + AluSx SINE Alu 1 297 -15 379 315 0 40 chr5 196986520 196986669 -2643481 - L2 LINE L2 -4 3309 3167 424 265 162 4 chr5 196987063 196987331 -2642819 + L1ME LINE L1 5414 5729 -392 1967 119 11 11 chr5 196988673 196988958 -2641192 + AluSq SINE Alu 13 297 -16 21 57 0 0 chr5 196988975 196989010 -2641140 + AT_rich Low_complexity Low_complexity 1 35 0 833 167 7 0 chr5 196989059 196989197 -2640953 - FLAM_C SINE Alu -4 139 1 320 292 82 34 chr5 196989200 196989467 -2640683 + L1M4 LINE L1 2540 2819 -3327 252 220 0 20 chr5 196989560 196989610 -2640540 + HAL1 LINE L1 12 60 -2447 371 214 0 0 chr5 196989786 196989856 -2640294 + AluJb SINE Alu 58 127 -175 1931 165 9 6 chr5 196989856 196990183 -2639967 + Tigger2 DNA MER2_type 1266 1593 -1125 336 170 96 21 chr5 196990184 196990278 -2639872 + L1M4 LINE L1 2336 2436 -3710 807 167 0 14 chr5 196990290 196990428 -2639722 - AluJo SINE Alu -176 136 1 1905 100 63 0 chr5 196990428 196990721 -2639429 - AluSq SINE Alu 0 310 1 230 213 194 9 chr5 196990780 196990888 -2639262 - L1M1 LINE L1 -4456 1514 1387 1656 165 32 4 chr5 196990889 196991168 -2638982 - AluSx SINE Alu -25 287 1 592 224 67 54 chr5 196991168 196991391 -2638759 - L1M1 LINE L1 -5008 893 668 745 316 64 27 chr5 196991509 196991915 -2638235 - L1M1 LINE L1 -5205 686 2 2768 211 131 36 chr5 196991918 196992049 -2638101 - L1MDa LINE L1 -4658 1882 1765 2383 82 7 0 chr5 196992049 196992354 -2637796 - AluY SINE Alu -4 307 1 2768 211 131 36 chr5 196992354 196992769 -2637381 - L1MDa LINE L1 -4775 1765 1391 2350 107 3 0 chr5 196992769 196993077 -2637073 - AluSg SINE Alu -1 309 1 2768 211 131 36 chr5 196993077 196994060 -2636090 - L1MDa LINE L1 -5149 1391 113 1383 175 58 24 chr5 196994060 196994351 -2635799 + AluJb SINE Alu 1 301 -11 2768 211 131 36 chr5 196994351 196994448 -2635702 - L1MDa LINE L1 -6427 113 27 21 57 0 0 chr5 196994837 196994872 -2635278 + AT_rich Low_complexity Low_complexity 1 35 0 202 352 14 0 chr5 196995408 196995479 -2634671 + L2 LINE L2 2866 2937 -335 742 247 43 0 chr5 196995653 196995884 -2634266 + L1M4 LINE L1 3780 4020 -2126 971 373 10 79 chr5 196995921 196996224 -2633926 - AluJb SINE Alu -30 282 1 838 226 102 7 chr5 196996262 196996537 -2633613 + L1M4 LINE L1 4098 4398 -1748 329 297 135 25 chr5 196997149 196997556 -2632594 + L2 LINE L2 1811 2262 -1052 189 376 120 8 chr5 196998043 196998168 -2631982 + L2 LINE L2 2921 3059 -213 1387 79 0 6 chr5 196998963 196999128 -2631022 - U1 snRNA snRNA -1 164 1 2033 145 7 3 chr5 196999950 197000260 -2629890 + MER1B DNA MER1_type 29 339 0 281 279 106 71 chr5 197000284 197000567 -2629583 + LTR67 LTR ERVL 252 544 -13 2241 110 0 10 chr5 197000760 197001069 -2629081 - AluY SINE Alu -5 306 1 189 74 0 0 chr5 197001287 197001314 -2628836 + (T)n Simple_repeat Simple_repeat 1 27 0 3100 245 70 40 chr5 197001342 197002546 -2627604 + L1ME LINE L1 5 1231 -4849 998 158 28 153 chr5 197002550 197002910 -2627240 - MER33 DNA MER1_type 0 324 10 1351 272 60 31 chr5 197002916 197003401 -2626749 + L1ME LINE L1 1277 1775 -4486 1749 155 76 3 chr5 197003585 197003876 -2626274 - AluSx SINE Alu 0 312 1 2340 91 3 3 chr5 197003891 197004200 -2625950 - AluSc SINE Alu 0 309 1 956 113 0 0 chr5 197004214 197004347 -2625803 - AluSq/x SINE Alu -180 133 1 293 269 74 20 chr5 197004744 197004893 -2625257 + L1ME LINE L1 1832 1988 -4273 2295 95 7 13 chr5 197004895 197005201 -2624949 + AluY SINE Alu 1 304 -7 1209 102 0 0 chr5 197005203 197005350 -2624800 + AluSc SINE Alu 143 289 -20 219 69 0 0 chr5 197005354 197005383 -2624767 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 478 282 50 29 chr5 197005538 197005787 -2624363 - L1MC4a LINE L1 -133 5988 5725 1373 196 38 7 chr5 197005792 197006083 -2624067 - MLT1D LTR MaLR 0 505 206 211 336 53 9 chr5 197006099 197006212 -2623938 + L2 LINE L2 3191 3308 -5 1995 124 38 3 chr5 197007729 197008020 -2622130 - AluJb SINE Alu -11 301 1 205 222 0 0 chr5 197011319 197011364 -2618786 - L2 LINE L2 -1 3312 3268 327 228 173 68 chr5 197012194 197012313 -2617837 + MIR SINE MIR 84 226 -36 2030 118 24 0 chr5 197012313 197012600 -2617550 + AluSp SINE Alu 1 294 -19 327 228 173 68 chr5 197012600 197012642 -2617508 + MIR SINE MIR 226 262 0 656 301 166 17 chr5 197012776 197013335 -2616815 + L2 LINE L2 2608 3259 -54 2318 95 0 7 chr5 197015492 197015798 -2614352 + AluSx SINE Alu 1 304 -8 302 229 96 36 chr5 197016384 197016467 -2613683 - MIR SINE MIR -105 103 16 2709 146 34 0 chr5 197016503 197016915 -2613235 - MSTB LTR MaLR 0 426 1 374 244 152 56 chr5 197017013 197017114 -2613036 + MARNA DNA Mariner 358 448 -138 2526 66 0 7 chr5 197017114 197017419 -2612731 + AluY SINE Alu 1 303 -8 374 244 152 56 chr5 197017419 197017514 -2612636 + MARNA DNA Mariner 448 573 -13 211 246 85 85 chr5 197017794 197017912 -2612238 - L2 LINE L2 -7 3306 3189 182 233 17 0 chr5 197018367 197018427 -2611723 + (TG)n Simple_repeat Simple_repeat 2 62 0 450 196 6 11 chr5 197018459 197018638 -2611512 + (TG)n Simple_repeat Simple_repeat 2 179 0 209 278 60 147 chr5 197018675 197019042 -2611108 - L2 LINE L2 -21 3251 2917 200 263 95 21 chr5 197020264 197020359 -2609791 - L3 LINE CR1 -302 1275 1174 241 317 117 42 chr5 197020375 197020495 -2609655 + L2 LINE L2 3156 3284 -29 2262 106 0 0 chr5 197020824 197021116 -2609034 - AluSx SINE Alu -10 302 11 74 66 0 0 chr5 197021672 197021809 -2608341 + AT_rich Low_complexity Low_complexity 1 137 0 559 180 0 0 chr5 197021818 197021907 -2608243 - AluJo SINE Alu -16 296 208 490 160 208 16 chr5 197021895 197021949 -2608201 - AluJo SINE Alu -125 187 145 * 2135 124 0 6 chr5 197021949 197022263 -2607887 - AluSx SINE Alu 0 312 1 490 160 208 16 chr5 197022263 197022333 -2607817 - AluJo SINE Alu -167 145 39 2462 101 0 0 chr5 197022519 197022826 -2607324 - AluSc SINE Alu -2 307 1 914 132 0 0 chr5 197022954 197023083 -2607067 - FLAM_C SINE Alu -3 130 2 209 291 107 73 chr5 197023183 197023389 -2606761 - MIR SINE MIR -6 256 44 2303 92 7 3 chr5 197023765 197024069 -2606081 - AluSq SINE Alu -8 305 1 681 295 66 50 chr5 197024555 197024948 -2605202 - L1MC/D LINE L1 -744 5402 5377 2591 30 0 0 chr5 197024948 197025243 -2604907 - AluYa5 SINE Alu -11 300 6 681 295 66 50 chr5 197025243 197025548 -2604602 - L1MC/D LINE L1 -769 5377 5078 236 167 309 0 chr5 197025556 197025640 -2604510 + L2 LINE L2 3204 3313 0 558 259 114 35 chr5 197025640 197025841 -2604309 - L1MC/D LINE L1 -2860 3286 3070 672 286 106 37 chr5 197025843 197026248 -2603902 - HAL1 LINE L1 -1 2506 2074 2460 67 0 0 chr5 197026637 197026936 -2603214 + AluY SINE Alu 3 301 -10 2022 158 0 0 chr5 197026977 197027275 -2602875 - AluJo SINE Alu -14 298 1 3392 193 41 12 chr5 197028297 197028968 -2601182 + L1MB3 LINE L1 5397 6094 -89 2297 116 0 0 chr5 197028968 197029271 -2600879 - AluSx SINE Alu -7 305 3 3392 193 41 12 chr5 197029271 197029362 -2600788 + L1MB3 LINE L1 6094 6181 -2 216 184 61 0 chr5 197030416 197030465 -2599685 + C-rich Low_complexity Low_complexity 2 53 0 394 297 52 41 chr5 197030932 197031188 -2598962 + MLT1L LTR MaLR 231 571 -44 245 279 272 22 chr5 197033566 197033702 -2596448 + MER91A DNA MER1_type 1 170 -26 205 192 0 55 chr5 197034073 197034146 -2596004 + GA-rich Low_complexity Low_complexity 2 70 0 268 275 78 14 chr5 197035297 197035439 -2594711 + MER91A DNA MER1_type 1 151 -45 25 0 0 0 chr5 197035991 197036016 -2594134 + GC_rich Low_complexity Low_complexity 1 25 0 445 183 39 61 chr5 197036758 197036938 -2593212 + (TCTCTG)n Simple_repeat Simple_repeat 5 180 0 190 345 35 0 chr5 197037117 197037204 -2592946 - MIR SINE MIR -125 137 48 207 296 187 38 chr5 197038136 197038531 -2591619 - L2 LINE L2 -884 2430 1977 899 242 58 36 chr5 197040051 197040415 -2589735 - MLT1B LTR MaLR -15 375 4 351 307 24 8 chr5 197040473 197040600 -2589550 + MIR SINE MIR 5 133 -129 2101 103 55 3 chr5 197040600 197040890 -2589260 - AluY SINE Alu -6 305 1 210 289 0 0 chr5 197041369 197041421 -2588729 + (TA)n Simple_repeat Simple_repeat 1 52 0 182 206 0 29 chr5 197041750 197041784 -2588366 - MIR SINE MIR -131 77 45 1271 273 144 33 chr5 197042423 197043098 -2587052 + L1MC4 LINE L1 6746 7495 -547 250 254 84 42 chr5 197043082 197043224 -2586926 + L1MC5 LINE L1 7312 7459 -502 * 22 70 0 0 chr5 197043224 197043267 -2586883 + AT_rich Low_complexity Low_complexity 1 43 0 296 282 127 41 chr5 197043837 197044153 -2585997 + L1MC4 LINE L1 7544 7886 -156 579 265 85 64 chr5 197044958 197045335 -2584815 + L1MDb LINE L1 776 1160 -5249 1700 229 55 20 chr5 197045335 197045789 -2584361 + MLT1F1 LTR MaLR 98 567 0 345 272 104 0 chr5 197045793 197045918 -2584232 + MLT1F1-int LTR MaLR 5 142 -1229 370 240 231 31 chr5 197045963 197046192 -2583958 + MLT1F1-int LTR MaLR 309 583 -788 3393 193 29 6 chr5 197046310 197046977 -2583173 + L1MB8 LINE L1 5488 6169 -9 5405 194 53 22 chr5 197046987 197047918 -2582232 - Cheshire DNA MER1_type -279 2141 1161 2364 93 3 3 chr5 197047918 197048219 -2581931 + AluSx SINE Alu 1 301 -11 5405 194 53 22 chr5 197048219 197048516 -2581634 - Cheshire DNA MER1_type -1259 1161 875 3841 218 48 45 chr5 197048937 197049465 -2580685 - L1MCc LINE L1 -4851 1571 1046 198 0 0 0 chr5 197049465 197049487 -2580663 + (TG)n Simple_repeat Simple_repeat 2 23 0 3841 218 48 45 chr5 197049487 197050321 -2579829 - L1MCc LINE L1 -5376 1046 19 203 0 37 0 chr5 197050622 197050649 -2579501 + (CA)n Simple_repeat Simple_repeat 2 29 0 505 276 115 22 chr5 197050831 197051334 -2578816 - L1M4 LINE L1 -2305 5260 4711 2687 49 0 0 chr5 197051376 197051684 -2578466 - AluY SINE Alu -3 308 1 373 265 108 90 chr5 197051686 197052029 -2578121 - L1M4 LINE L1 -2848 4717 4369 6739 138 21 23 chr5 197052405 197053361 -2576789 - L1MA4 LINE L1 -5 6295 5338 180 0 0 0 chr5 197053361 197053381 -2576769 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 6739 138 21 23 chr5 197053381 197053610 -2576540 - L1MA4 LINE L1 -962 5338 5110 2222 134 0 0 chr5 197053610 197053916 -2576234 - AluSx SINE Alu -6 306 1 6739 138 21 23 chr5 197053916 197054994 -2575156 - L1MA4 LINE L1 -1190 5110 4042 3731 243 82 29 chr5 197054996 197055976 -2574174 - L1M4 LINE L1 -4197 3368 2441 1973 159 0 0 chr5 197055976 197056272 -2573878 - AluSx SINE Alu -16 296 1 3731 243 82 29 chr5 197056272 197056392 -2573758 - L1M4 LINE L1 -5124 2441 2329 2245 83 0 38 chr5 197056392 197056706 -2573444 - AluSc SINE Alu -7 302 1 3731 243 82 29 chr5 197056706 197057059 -2573091 - L1M4 LINE L1 -5236 2329 1837 861 333 17 25 chr5 197057543 197057945 -2572205 - L1M4 LINE L1 -5546 1940 1542 347 287 96 20 chr5 197057951 197058359 -2571791 - L1M4 LINE L1 -3220 2926 2488 5442 229 62 25 chr5 197058828 197059044 -2571106 + L1M4 LINE L1 2603 2810 -3336 2102 131 17 0 chr5 197059044 197059342 -2570808 + AluSx SINE Alu 3 305 -7 5442 229 62 25 chr5 197059342 197059570 -2570580 + L1M4 LINE L1 2810 3028 -3118 2822 19 0 9 chr5 197059570 197059891 -2570259 + AluYb8 SINE Alu 1 318 0 5442 229 62 25 chr5 197059891 197060830 -2569320 + L1M4 LINE L1 3028 3931 -2215 1853 159 0 19 chr5 197060830 197061138 -2569012 + AluJo SINE Alu 1 302 -10 5442 229 62 25 chr5 197061138 197061800 -2568350 + L1M4 LINE L1 3931 4918 -1228 34087 34 30 3 chr5 197061819 197066226 -2563924 + L1P LINE L1 4 4529 -1617 297 308 0 17 chr5 197066375 197066492 -2563658 + CT-rich Low_complexity Low_complexity 2 116 0 876 236 80 90 chr5 197066582 197067005 -2563145 - MLT1E2 LTR MaLR -2 624 206 265 224 0 0 chr5 197067054 197067112 -2563038 - LTR33 LTR ERVL -463 58 1 367 176 15 96 chr5 197067188 197067324 -2562826 - MLT1E2 LTR MaLR -450 176 52 2565 79 11 14 chr5 197067380 197067736 -2562414 - THE1A LTR MaLR 0 355 1 1241 114 6 0 chr5 197069504 197069670 -2560480 + AluSx SINE Alu 1 167 -145 603 303 18 52 chr5 197069856 197070186 -2559964 + MLT1H LTR MaLR 13 331 -218 1293 116 17 0 chr5 197070881 197071062 -2559088 - AluSg SINE Alu -126 184 1 227 378 101 7 chr5 197071094 197071242 -2558908 + MIR SINE MIR 31 192 -70 25 51 0 0 chr5 197071849 197071888 -2558262 + AT_rich Low_complexity Low_complexity 1 39 0 199 236 28 0 chr5 197072504 197072576 -2557574 + CT-rich Low_complexity Low_complexity 2 75 0 186 241 23 23 chr5 197072927 197073060 -2557090 + GA-rich Low_complexity Low_complexity 2 134 0 213 108 0 0 chr5 197073472 197073509 -2556641 + (CA)n Simple_repeat Simple_repeat 2 38 0 1825 212 127 2 chr5 197073766 197074215 -2555935 + MLT1D LTR MaLR 1 505 0 4510 121 29 17 chr5 197075386 197076152 -2553998 + Tigger4(Zombi) DNA MER2_type 1736 2510 -221 1076 168 18 0 chr5 197076210 197076436 -2553714 + MER46B DNA MER2_type 131 235 -1 327 200 117 117 chr5 197076923 197077068 -2553082 + MLT1E1 LTR MaLR 5 149 -505 1106 242 36 8 chr5 197077567 197077930 -2552220 - L1PA15-16 LINE L1 -3931 2918 2546 * 4804 251 80 41 chr5 197077922 197079475 -2550675 - L1PA15-16 LINE L1 -5173 1666 53 1145 241 82 47 chr5 197079539 197080175 -2549975 + Looper DNA T2_type 13 670 -888 2775 209 27 52 chr5 197080840 197080928 -2549222 + L1P LINE L1 2239 2328 -3818 2046 218 50 61 chr5 197080928 197081488 -2548662 + MLT2B3 LTR ERVL 1 554 0 2775 209 27 52 chr5 197081488 197081605 -2548545 + L1P LINE L1 2328 2446 -3700 495 0 0 0 chr5 197081605 197081660 -2548490 + (TA)n Simple_repeat Simple_repeat 2 56 0 2775 209 27 52 chr5 197081660 197082106 -2548044 + L1P LINE L1 2446 2868 -3278 1918 144 4 0 chr5 197082106 197082384 -2547766 - AluSx SINE Alu -29 283 5 2775 209 27 52 chr5 197082384 197082568 -2547582 + L1P LINE L1 2868 3055 -3091 251 306 69 65 chr5 197083689 197083905 -2546245 + L2 LINE L2 2301 2517 -797 951 231 101 57 chr5 197083983 197084421 -2545729 + MLT1C LTR MaLR 9 465 -2 201 136 45 0 chr5 197084824 197084868 -2545282 + L2 LINE L2 2924 2969 -303 25 0 0 0 chr5 197085049 197085074 -2545076 + AT_rich Low_complexity Low_complexity 1 25 0 275 285 117 7 chr5 197085254 197085391 -2544759 + MIR SINE MIR 86 237 -25 1153 253 88 59 chr5 197085695 197086434 -2543716 - L1MC5 LINE L1 -722 7239 6476 23 0 0 0 chr5 197086507 197086530 -2543620 + AT_rich Low_complexity Low_complexity 1 23 0 320 261 35 126 chr5 197086585 197086933 -2543217 - HAL1b LINE L1 -624 724 409 1457 92 0 0 chr5 197086935 197087120 -2543030 + AluSx SINE Alu 3 187 -125 1209 207 20 8 chr5 197087335 197087586 -2542564 + MLT1E LTR MaLR 334 587 -6 230 289 0 13 chr5 197088110 197088186 -2541964 + LTR33A LTR ERVL 444 518 -5 2761 22 0 0 chr5 197089456 197089768 -2540382 + AluYb8 SINE Alu 1 312 -6 1103 171 95 4 chr5 197089966 197089998 -2540152 + L1MC/D LINE L1 5161 5189 -1123 234 0 0 0 chr5 197089998 197090024 -2540126 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1103 171 95 4 chr5 197090024 197090325 -2539825 + L1MC/D LINE L1 5189 5527 -785 1820 160 7 0 chr5 197090955 197091261 -2538889 - AluSx SINE Alu 0 308 1 21 36 0 0 chr5 197091643 197091671 -2538479 + AT_rich Low_complexity Low_complexity 1 28 0 186 351 14 27 chr5 197092414 197092488 -2537662 + L2 LINE L2 3134 3206 -66 21 36 0 0 chr5 197092747 197092775 -2537375 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 197093777 197093798 -2536352 + AT_rich Low_complexity Low_complexity 1 21 0 480 203 23 16 chr5 197094395 197094523 -2535627 + MER112 DNA MER1_type 97 225 -35 1321 209 3 71 chr5 197095012 197095309 -2534841 - AluJb SINE Alu -35 277 1 2064 182 32 0 chr5 197095647 197096053 -2534097 - L1MC1 LINE L1 -15 6318 5900 445 174 9 78 chr5 197096097 197096212 -2533938 - L1MC1 LINE L1 -2206 5789 5683 1118 199 19 19 chr5 197096259 197096515 -2533635 - L1MC/D LINE L1 -557 5776 5521 2061 114 10 3 chr5 197096902 197097192 -2532958 - AluSc SINE Alu -17 292 1 278 224 132 46 chr5 197097391 197097565 -2532585 + MER53 DNA DNA 1 189 0 376 193 34 0 chr5 197098009 197098097 -2532053 - L1MC1 LINE L1 -11 6322 6232 306 228 25 13 chr5 197098098 197098177 -2531973 - Tigger5 DNA MER2_type -2 2321 2242 314 232 0 29 chr5 197098346 197098415 -2531735 - Tigger5 DNA MER2_type -2254 69 3 599 337 102 0 chr5 197098613 197098907 -2531243 + L2 LINE L2 2537 2860 -454 1384 169 22 0 chr5 197098972 197099197 -2530953 - AluSg/x SINE Alu -1 309 80 1709 87 9 4 chr5 197099466 197099697 -2530453 + AluSp SINE Alu 1 232 -81 258 222 19 0 chr5 197100324 197100378 -2529772 + L2 LINE L2 3257 3311 -2 180 0 0 0 chr5 197100473 197100493 -2529657 + (T)n Simple_repeat Simple_repeat 1 20 0 252 329 60 47 chr5 197100545 197100846 -2529304 + L2 LINE L2 1991 2295 -1019 476 188 54 4 chr5 197102256 197102391 -2527759 + MER61E LTR ERV1 1 798 -484 586 165 77 151 chr5 197102543 197102948 -2527202 + LTR25 LTR ERV1 415 1232 -44 21 57 0 0 chr5 197103406 197103441 -2526709 + AT_rich Low_complexity Low_complexity 1 35 0 1464 180 10 0 chr5 197104752 197105047 -2525103 - L1MA4 LINE L1 -2 6298 6001 183 129 0 0 chr5 197105606 197105637 -2524513 + (CCCA)n Simple_repeat Simple_repeat 2 32 0 2468 54 0 14 chr5 197108105 197108400 -2521750 - AluY SINE Alu -20 291 1 357 24 0 0 chr5 197109725 197109767 -2520383 + (TG)n Simple_repeat Simple_repeat 2 43 0 201 39 0 0 chr5 197110746 197110772 -2519378 + (CGGGGG)n Simple_repeat Simple_repeat 4 29 0 26 0 0 0 chr5 197112544 197112570 -2517580 + AT_rich Low_complexity Low_complexity 1 26 0 456 287 57 57 chr5 197112773 197112982 -2517168 + L2 LINE L2 3105 3313 0 26631 28 3 0 chr5 197113276 197117201 -2512949 - L1PA3 LINE L1 0 6155 2224 183 371 109 23 chr5 197117852 197118027 -2512123 + MIR SINE MIR 23 212 -50 338 331 116 61 chr5 197118518 197119154 -2510996 - L2 LINE L2 0 3313 2638 341 56 0 37 chr5 197119177 197119231 -2510919 + Alu SINE Alu 236 287 -13 2261 60 21 7 chr5 197119747 197120031 -2510119 + AluY SINE Alu 1 288 -23 207 0 0 0 chr5 197120034 197120057 -2510093 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 239 172 0 17 chr5 197120125 197120183 -2509967 + CT-rich Low_complexity Low_complexity 4 60 0 825 227 131 84 chr5 197120379 197120434 -2509716 - MSTC LTR MaLR -3 425 374 2230 104 0 25 chr5 197120434 197120752 -2509398 - AluSx SINE Alu 0 312 3 825 227 131 84 chr5 197120752 197121102 -2509048 - MSTC LTR MaLR -54 374 1 975 213 4 52 chr5 197121517 197121747 -2508403 - MER20 DNA MER1_type 0 219 1 369 131 0 0 chr5 197121956 197122017 -2508133 + (GGA)n Simple_repeat Simple_repeat 3 63 0 1643 175 24 7 chr5 197122063 197122355 -2507795 + AluSx SINE Alu 1 297 -15 503 245 147 22 chr5 197122671 197122855 -2507295 + MER58A DNA MER1_type 6 212 -12 31 0 0 0 chr5 197122886 197122917 -2507233 + AT_rich Low_complexity Low_complexity 1 31 0 395 225 128 24 chr5 197122959 197123132 -2507018 + MLT1B LTR MaLR 23 194 -180 862 235 20 0 chr5 197123162 197123358 -2506792 + MLT1B LTR MaLR 189 388 -2 222 308 192 25 chr5 197123379 197123499 -2506651 - L2 LINE L2 0 3272 3133 882 221 216 29 chr5 197123628 197124123 -2506027 + LTR28 LTR ERV1 1 1305 -141 584 220 14 28 chr5 197124455 197124596 -2505554 + MER106A DNA MER1_type 1 139 -97 3278 16 10 8 chr5 197125392 197125779 -2504371 + L1PA3 LINE L1 5767 6154 -1 644 228 20 0 chr5 197125806 197125955 -2504195 + L1M4 LINE L1 4922 5073 -1073 1559 223 69 24 chr5 197125957 197126451 -2503699 + L1ME1 LINE L1 4876 5391 -755 1090 239 139 8 chr5 197126452 197126708 -2503442 + L1ME1 LINE L1 5742 6062 -104 2311 103 0 7 chr5 197126708 197127009 -2503141 - AluSx SINE Alu -13 299 1 1090 239 139 8 chr5 197127009 197127120 -2503030 + L1ME1 LINE L1 6062 6157 -9 865 269 81 114 chr5 197127203 197127719 -2502431 + L1MEc LINE L1 2076 2608 -3607 2093 110 7 0 chr5 197127719 197128044 -2502106 + AluSx SINE Alu 1 327 0 865 269 81 114 chr5 197128044 197128135 -2502015 + L1MEc LINE L1 2608 2608 -3607 2181 123 3 16 chr5 197128135 197128452 -2501698 + AluSq SINE Alu 1 313 0 865 269 81 114 chr5 197128452 197128630 -2501520 + L1MEc LINE L1 2607 2789 -3426 2539 66 3 0 chr5 197128736 197129038 -2501112 + AluY SINE Alu 1 303 -8 675 178 109 23 chr5 197129059 197129233 -2500917 + MER53 DNA DNA 1 189 0 182 358 123 0 chr5 197134366 197134528 -2495622 + L2 LINE L2 1217 1398 -1916 423 197 0 30 chr5 197134530 197134662 -2495488 + GA-rich Low_complexity Low_complexity 3 130 0 220 340 123 42 chr5 197135234 197135543 -2494607 + L2 LINE L2 2844 3177 -95 248 296 88 56 chr5 197136345 197136401 -2493749 + L2 LINE L2 3138 3191 -81 990 225 5 14 chr5 197136401 197136494 -2493656 + MER58A DNA MER1_type 1 93 -2327 2271 82 53 0 chr5 197136494 197136776 -2493374 - AluSg SINE Alu -13 297 1 990 225 5 14 chr5 197136776 197136904 -2493246 + MER58A DNA MER1_type 93 220 -4 248 296 88 56 chr5 197136904 197136972 -2493178 + L2 LINE L2 3191 3266 -6 598 266 83 46 chr5 197137438 197137810 -2492340 + MER113 DNA MER1_type? 26 411 -110 1551 198 129 86 chr5 197142274 197142345 -2487805 + MER77 LTR ERV1 1 67 -538 218 32 32 0 chr5 197142345 197142376 -2487774 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1772 156 0 10 chr5 197142381 197142670 -2487480 - AluJb SINE Alu -26 286 1 1551 198 129 86 chr5 197142670 197143172 -2486978 + MER77 LTR ERV1 70 605 0 1020 205 19 0 chr5 197145463 197145678 -2484472 + MER20 DNA MER1_type 1 219 0 278 317 115 40 chr5 197145787 197146109 -2484041 - L2 LINE L2 -337 2977 2632 2376 221 68 31 chr5 197147157 197147322 -2482828 + MER82 DNA MER2_type 10 167 -486 2167 78 3 57 chr5 197147322 197147653 -2482497 - AluSq SINE Alu 0 313 1 2376 221 68 31 chr5 197147653 197148108 -2482042 + MER82 DNA MER2_type 167 653 0 214 205 90 64 chr5 197148626 197148704 -2481446 - MIR SINE MIR -64 144 65 447 287 112 8 chr5 197149725 197149993 -2480157 - MER113 DNA MER1_type? -95 426 131 2259 90 20 3 chr5 197149993 197150294 -2479856 + AluY SINE Alu 1 306 -5 194 125 0 25 chr5 197150343 197150383 -2479767 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 724 157 26 0 chr5 197151906 197152021 -2478129 - FLAM_C SINE Alu -15 118 1 2341 82 3 20 chr5 197152227 197152532 -2477618 - AluSx SINE Alu -12 300 1 1943 90 66 31 chr5 197152686 197152974 -2477176 - AluSx SINE Alu -14 298 1 1242 234 14 37 chr5 197153130 197153481 -2476669 + MER74B LTR ERVL 56 398 -224 409 139 0 70 chr5 197153684 197153842 -2476308 + (CCCCAG)n Simple_repeat Simple_repeat 2 148 0 267 302 9 28 chr5 197154239 197154345 -2475805 - MER5A DNA MER1_type -20 169 66 * 314 268 154 24 chr5 197154251 197154374 -2475776 + MER5A DNA MER1_type 43 181 -8 181 268 0 0 chr5 197154397 197154438 -2475712 - L2 LINE L2 -12 3260 3220 214 404 11 0 chr5 197154438 197154491 -2475659 - MIR SINE MIR -6 256 162 2224 88 0 23 chr5 197155034 197155340 -2474810 + AluSx SINE Alu 1 299 -13 2230 96 0 0 chr5 197155340 197155642 -2474508 + AluY SINE Alu 1 302 -9 400 254 79 0 chr5 197155928 197156042 -2474108 + MLT1K LTR MaLR 464 586 -2 219 304 32 40 chr5 197156730 197156855 -2473295 + MIR SINE MIR 60 183 -79 683 244 89 13 chr5 197159238 197159451 -2470699 - MER69 DNA AcHobo -29 2497 2253 2197 76 6 50 chr5 197159451 197159768 -2470382 - AluSx SINE Alu -9 303 1 683 244 89 13 chr5 197159768 197159857 -2470293 - MER69 DNA AcHobo -273 2253 2172 816 160 0 88 chr5 197159885 197160079 -2470071 - MER58A DNA MER1_type -6 218 42 5411 202 42 101 chr5 197160092 197160915 -2469235 + L1MB7 LINE L1 18 888 -5967 368 192 14 0 chr5 197160915 197160988 -2469162 - Tigger4(Zombi) DNA MER2_type 0 2731 2658 304 196 0 0 chr5 197160958 197161014 -2469136 - Tigger4(Zombi) DNA MER2_type -2675 56 1 * 5411 202 42 101 chr5 197161014 197161805 -2468345 + L1MB7 LINE L1 914 1614 -5241 2117 106 20 3 chr5 197161805 197162107 -2468043 + AluSx SINE Alu 1 307 -5 5411 202 42 101 chr5 197162107 197162220 -2467930 + L1MB7 LINE L1 1614 1732 -5123 304 234 75 0 chr5 197162220 197162314 -2467836 + MLT1A1 LTR MaLR 63 163 -202 810 196 29 33 chr5 197162407 197162647 -2467503 - MER69 DNA AcHobo -830 1696 1458 4096 205 53 19 chr5 197162648 197164498 -2465652 + L1MB7 LINE L1 5012 6935 -60 2174 116 0 6 chr5 197164498 197164809 -2465341 - AluSq SINE Alu -4 309 1 4096 205 53 19 chr5 197164809 197164863 -2465287 + L1MB7 LINE L1 6935 6986 -9 1760 254 31 22 chr5 197164976 197165618 -2464532 - MER69 DNA AcHobo -426 2100 1453 2249 122 0 0 chr5 197165731 197166043 -2464107 - AluSx SINE Alu 0 312 1 1281 220 53 67 chr5 197166263 197166694 -2463456 - MER69 DNA AcHobo -2101 425 1 313 295 82 8 chr5 197166909 197167196 -2462954 + LTR16A LTR ERVL 4 332 -118 1366 209 115 18 chr5 197167770 197168101 -2462049 + MLT1A1 LTR MaLR 1 363 -2 1973 214 19 37 chr5 197169099 197169554 -2460596 + L1MB5 LINE L1 5666 6112 -62 2056 141 0 0 chr5 197169554 197169853 -2460297 - AluSx SINE Alu -13 299 1 1973 214 19 37 chr5 197169853 197169915 -2460235 + L1MB5 LINE L1 6112 6174 0 480 316 7 0 chr5 197171490 197171642 -2458508 + MIR SINE MIR 35 187 -75 246 291 93 80 chr5 197174720 197175017 -2455133 - HAL1 LINE L1 -1070 1437 1145 2260 78 3 0 chr5 197175017 197175311 -2454839 - AluY SINE Alu -12 299 5 246 291 93 80 chr5 197175311 197175612 -2454538 - HAL1 LINE L1 -1362 1145 831 2163 88 48 0 chr5 197175612 197175907 -2454243 - AluSx SINE Alu -3 309 1 965 146 73 18 chr5 197176223 197176388 -2453762 - FRAM SINE Alu -2 174 1 633 285 117 15 chr5 197176388 197176669 -2453481 - L1ME LINE L1 -723 5441 5190 2281 89 0 10 chr5 197176669 197176983 -2453167 - AluY SINE Alu 0 311 1 633 285 117 15 chr5 197176983 197177283 -2452867 - L1ME LINE L1 -974 5190 4786 364 129 143 0 chr5 197178149 197178219 -2451931 - MADE1 DNA Mariner 0 80 1 392 288 24 8 chr5 197178439 197178564 -2451586 - MIR SINE MIR -133 129 3 2218 87 27 0 chr5 197178895 197179194 -2450956 + AluSx SINE Alu 1 307 -5 867 288 55 14 chr5 197179495 197179839 -2450311 + MLT1I LTR MaLR 52 409 0 2520 173 33 7 chr5 197180102 197180554 -2449596 + L1MA5 LINE L1 5835 6298 -2 247 252 117 0 chr5 197180960 197181063 -2449087 + MLT1K LTR MaLR 131 245 -343 259 281 0 0 chr5 197181172 197181236 -2448914 - MLT1E LTR MaLR -163 430 367 247 269 0 15 chr5 197181501 197181568 -2448582 + MLT1K LTR MaLR 511 576 -12 238 167 33 17 chr5 197181970 197182030 -2448120 - Charlie8 DNA MER1_type -2015 402 342 211 273 106 0 chr5 197183662 197183728 -2446422 - L2 LINE L2 -994 2320 2248 197 325 38 0 chr5 197185860 197185940 -2444210 - MIR SINE MIR -110 152 70 806 191 18 67 chr5 197186806 197187031 -2443119 - MER20 DNA MER1_type -5 214 1 470 303 48 0 chr5 197187126 197187291 -2442859 + MIR SINE MIR 76 248 -14 265 287 96 29 chr5 197187356 197187492 -2442658 - MIR SINE MIR -117 145 1 1832 209 22 3 chr5 197187789 197188147 -2442003 + MLT1A1 LTR MaLR 1 365 0 214 353 84 32 chr5 197189169 197189359 -2440791 - L3 LINE CR1 -115 1462 1263 904 244 143 14 chr5 197189657 197189944 -2440206 + MER5C DNA MER1_type 1 324 0 340 264 116 47 chr5 197191418 197191547 -2438603 - L3 LINE CR1 -891 686 549 31 44 0 0 chr5 197191553 197191598 -2438552 + AT_rich Low_complexity Low_complexity 1 45 0 1683 167 0 24 chr5 197191645 197191969 -2438181 + AluJo SINE Alu 3 319 0 822 280 108 20 chr5 197191973 197192426 -2437724 - L1ME4a LINE L1 -26 6095 5603 2261 91 13 7 chr5 197192453 197192762 -2437388 + AluSx SINE Alu 1 311 -1 389 299 139 52 chr5 197192912 197193374 -2436776 - L1ME4a LINE L1 -872 5274 3161 624 360 48 29 chr5 197194092 197194479 -2435671 - L1M4 LINE L1 -1572 4574 4177 329 299 8 8 chr5 197194673 197194790 -2435360 - MER103 DNA DNA -48 118 2 241 299 281 20 chr5 197195073 197195468 -2434682 + L2 LINE L2 2243 2740 -574 280 349 153 17 chr5 197195666 197195901 -2434249 + L2 LINE L2 3006 3272 0 317 390 29 4 chr5 197195917 197196158 -2433992 - L1M4 LINE L1 -2278 3868 3622 1028 347 70 48 chr5 197197363 197197692 -2432458 - L1M4 LINE L1 -2925 3221 2901 1929 135 0 7 chr5 197197692 197197966 -2432184 - AluSx SINE Alu -40 272 1 1028 347 70 48 chr5 197197966 197198445 -2431705 - L1M4 LINE L1 -3245 2901 2395 400 343 28 42 chr5 197198671 197198884 -2431266 + MIR SINE MIR 21 230 -32 1899 198 56 9 chr5 197199146 197199591 -2430559 + MER74A LTR ERVL 27 492 -66 457 300 65 46 chr5 197200182 197200580 -2429570 + Charlie4a DNA MER1_type 87 492 -16 208 281 101 11 chr5 197200598 197200687 -2429463 + L2 LINE L2 2671 2767 -547 292 305 94 16 chr5 197201678 197201806 -2428344 + MIR SINE MIR 118 255 -7 1257 232 7 17 chr5 197202527 197202829 -2427321 + MLT1A2 LTR MaLR 76 374 0 2283 94 7 0 chr5 197202950 197203259 -2426891 + AluSx SINE Alu 1 311 -1 206 324 42 51 chr5 197203665 197203881 -2426269 - L2 LINE L2 -232 3040 2827 190 326 179 5 chr5 197205946 197206142 -2424008 + L2 LINE L2 2721 2950 -364 * 338 198 163 12 chr5 197206121 197206207 -2423943 + L2 LINE L2 3214 3312 -1 702 236 6 0 chr5 197207730 197207887 -2422263 + MIR SINE MIR 30 187 -75 814 147 0 20 chr5 197207901 197208051 -2422099 - LTR7 LTR ERV1 0 450 304 2101 95 0 33 chr5 197208070 197208376 -2421774 - AluY SINE Alu -15 296 1 813 130 8 18 chr5 197208701 197208869 -2421281 - LTR7 LTR ERV1 -232 218 1 2968 86 21 11 chr5 197208869 197209345 -2420805 - HERVH LTR ERV1 0 7713 7233 490 68 14 14 chr5 197209345 197209419 -2420731 + LTR7 LTR ERV1 377 450 0 185 331 66 30 chr5 197211730 197211896 -2418254 + L2 LINE L2 2933 3104 -168 261 306 0 0 chr5 197212090 197212152 -2417998 - MIR SINE MIR -111 151 90 315 286 88 0 chr5 197212390 197212481 -2417669 - L2 LINE L2 0 3272 3174 433 300 65 46 chr5 197214106 197214413 -2415737 + MER102b DNA MER1_type 16 328 -13 968 192 16 0 chr5 197215494 197215676 -2414474 - MER58A DNA MER1_type -34 190 6 1329 188 99 11 chr5 197216169 197216441 -2413709 + AluJo SINE Alu 1 296 -16 2282 108 0 0 chr5 197217272 197217578 -2412572 + AluSx SINE Alu 1 306 -6 479 228 24 0 chr5 197217857 197217984 -2412166 + MER45C DNA AcHobo 40 169 -784 348 332 51 27 chr5 197218023 197218315 -2411835 + MER45C DNA AcHobo 366 664 -289 1234 225 28 22 chr5 197218471 197218827 -2411323 + MER45B DNA AcHobo 683 1040 0 2251 111 0 0 chr5 197218957 197219263 -2410887 - AluSx SINE Alu 0 312 7 464 374 73 36 chr5 197219822 197220180 -2409970 + L1ME4a LINE L1 5491 5861 -260 2082 97 3 53 chr5 197220226 197220547 -2409603 + AluSx SINE Alu 3 307 -5 369 294 126 69 chr5 197220914 197221336 -2408814 + L2 LINE L2 2850 3295 -18 242 298 43 43 chr5 197221528 197221669 -2408481 - MLT1I LTR MaLR -189 220 80 2819 221 46 4 chr5 197222393 197223091 -2407059 + L1MB3 LINE L1 5454 6180 -3 394 239 68 61 chr5 197223094 197223257 -2406893 - MER3 DNA MER1_type -41 168 5 349 298 82 16 chr5 197224104 197224290 -2405860 - MIR SINE MIR -50 212 16 204 313 27 80 chr5 197224356 197224468 -2405682 + MIR SINE MIR 156 261 -1 2262 37 44 0 chr5 197224472 197224779 -2405371 - AluY SINE Alu 0 319 1 242 189 162 70 chr5 197226517 197226681 -2403469 - MIR SINE MIR -65 143 8 489 198 0 0 chr5 197228231 197228337 -2401813 + (CA)n Simple_repeat Simple_repeat 1 106 0 308 263 0 42 chr5 197228740 197228835 -2401315 + Charlie8 DNA MER1_type 80 170 -2247 308 283 179 55 chr5 197230888 197231581 -2398569 - L1M2 LINE L1 -5630 1219 441 319 391 85 20 chr5 197231876 197232170 -2397980 + L2 LINE L2 2944 3256 -57 351 354 94 38 chr5 197233249 197233537 -2396613 + L1MB8 LINE L1 4299 4602 -1544 421 350 85 31 chr5 197233629 197233889 -2396261 + L1MB8 LINE L1 4557 4830 -1316 2370 91 3 0 chr5 197233889 197234196 -2395954 + AluSp SINE Alu 1 308 -5 798 261 8 25 chr5 197234228 197234466 -2395684 + HAL1 LINE L1 4 237 -2270 1140 277 28 6 chr5 197234520 197234990 -2395160 + HAL1 LINE L1 1464 1917 -590 412 324 113 5 chr5 197235835 197236048 -2394102 + L1MB5 LINE L1 5728 5963 -211 314 342 99 25 chr5 197236183 197236344 -2393806 + L1MB8 LINE L1 4910 5082 -1064 227 256 13 51 chr5 197237735 197237813 -2392337 + MLT1K LTR MaLR 74 148 -440 268 307 176 13 chr5 197237943 197238096 -2392054 + MLT1K LTR MaLR 402 579 -9 219 204 0 0 chr5 197241940 197241994 -2388156 + (CA)n Simple_repeat Simple_repeat 2 55 0 494 228 0 11 chr5 197242006 197242186 -2387964 + (CA)n Simple_repeat Simple_repeat 2 179 0 288 291 0 0 chr5 197242239 197242414 -2387736 + (CA)n Simple_repeat Simple_repeat 1 175 0 288 273 0 13 chr5 197242460 197242537 -2387613 + (TG)n Simple_repeat Simple_repeat 1 76 0 186 236 0 0 chr5 197242537 197242592 -2387558 + (CA)n Simple_repeat Simple_repeat 2 56 0 513 280 7 7 chr5 197243141 197243284 -2386866 - Charlie8 DNA MER1_type -1905 512 370 365 284 63 32 chr5 197243356 197243546 -2386604 - Charlie8 DNA MER1_type -2219 198 3 230 279 0 19 chr5 197243951 197244055 -2386095 + L1MB8 LINE L1 5242 5343 -803 3855 114 43 55 chr5 197244099 197244865 -2385285 + LTR1 LTR ERV1 29 785 0 349 125 0 28 chr5 197244905 197244977 -2385173 + (TTTC)n Simple_repeat Simple_repeat 3 72 0 1926 144 13 32 chr5 197244981 197245293 -2384857 - AluSx SINE Alu 0 312 7 233 367 7 7 chr5 197245430 197245580 -2384570 + L1MB8 LINE L1 5578 5727 -2081 206 349 78 9 chr5 197246672 197246890 -2383260 - L2 LINE L2 -836 2478 2246 187 265 45 76 chr5 197247010 197247142 -2383008 - MIR3 SINE MIR -71 137 10 210 297 54 0 chr5 197247673 197247784 -2382366 + MIR3 SINE MIR 9 125 -83 2315 63 3 0 chr5 197249457 197249744 -2380406 + AluSq SINE Alu 7 294 -19 1429 214 25 49 chr5 197249851 197250257 -2379893 + L1MA10 LINE L1 5877 6272 -62 924 173 0 23 chr5 197250498 197250671 -2379479 + FRAM SINE Alu 1 40 0 750 286 74 9 chr5 197251030 197251261 -2378889 - MIR SINE MIR -10 252 7 190 379 26 52 chr5 197251219 197251372 -2378778 + MIR SINE MIR 7 155 -107 * 1958 123 3 29 chr5 197252123 197252439 -2377711 + AluSg SINE Alu 3 310 0 257 318 57 0 chr5 197253725 197253813 -2376337 + L2 LINE L2 2929 3021 -251 1573 211 0 0 chr5 197255239 197255524 -2374626 + AluJb SINE Alu 9 293 -19 1648 140 41 138 chr5 197255541 197255695 -2374455 + MLT1A2 LTR MaLR 1 168 -206 1513 191 3 27 chr5 197255695 197255988 -2374162 + AluJo SINE Alu 1 286 -26 1648 140 41 138 chr5 197255988 197256247 -2373903 + MLT1A2 LTR MaLR 168 374 0 442 323 102 43 chr5 197257143 197257584 -2372566 - L2 LINE L2 -161 3152 2690 551 210 114 3 chr5 197257613 197257847 -2372303 + L1MB8 LINE L1 5900 6178 0 1264 268 100 100 chr5 197257847 197258838 -2371312 - L2 LINE L2 -615 2699 1709 676 326 192 0 chr5 197258840 197259324 -2370826 - L2 LINE L2 -1947 1367 791 370 324 154 18 chr5 197260707 197260979 -2369171 + MLT1K LTR MaLR 144 452 -136 2330 224 18 58 chr5 197261146 197261770 -2368380 + L1M4b LINE L1 4 602 -6257 3322 226 79 34 chr5 197261784 197263460 -2366690 + L1M4b LINE L1 802 2686 -4452 303 303 60 79 chr5 197263486 197263672 -2366478 + L1MEc LINE L1 1731 1919 -4477 2120 231 28 12 chr5 197263672 197264169 -2365981 + MLT1D LTR MaLR 1 505 0 303 303 60 79 chr5 197264169 197264204 -2365946 + L1MEc LINE L1 1919 1953 -4443 2814 6 0 0 chr5 197264204 197264515 -2365635 + AluY SINE Alu 1 311 0 303 303 60 79 chr5 197264515 197264658 -2365492 + L1MEc LINE L1 1953 2089 -4307 * 6298 232 81 28 chr5 197264641 197269096 -2361054 + L1M4 LINE L1 14 4702 -1942 874 229 6 6 chr5 197269097 197269280 -2360870 + L1MB8 LINE L1 5995 6177 -1 265 239 91 23 chr5 197269794 197269882 -2360268 + MIR SINE MIR 3 96 -166 692 159 21 14 chr5 197270319 197270464 -2359686 + L1MB7 LINE L1 5557 5702 -482 274 188 14 14 chr5 197270607 197270676 -2359474 + Charlie8 DNA MER1_type 126 194 -2223 1888 146 0 7 chr5 197270715 197271009 -2359141 - AluJb SINE Alu 0 312 21 1039 308 100 23 chr5 197271028 197272064 -2358086 - L1MEc LINE L1 -2987 3228 2153 2063 112 0 7 chr5 197272081 197272377 -2357773 + AluSx SINE Alu 1 294 -18 1039 189 66 0 chr5 197272996 197273224 -2356926 + L1MB7 LINE L1 5884 6126 -58 643 192 19 3 chr5 197273657 197273981 -2356169 + (TGGA)n Simple_repeat Simple_repeat 1 329 0 194 62 31 0 chr5 197275248 197275280 -2354870 + (GA)n Simple_repeat Simple_repeat 1 33 0 446 264 147 0 chr5 197275428 197275591 -2354559 - Charlie8 DNA MER1_type -2203 214 28 184 217 0 65 chr5 197275626 197275672 -2354478 - MIR3 SINE MIR -49 159 117 322 287 37 0 chr5 197276556 197276664 -2353486 + Charlie8 DNA MER1_type 43 154 -2263 290 286 125 9 chr5 197278064 197278176 -2351974 + L2 LINE L2 3147 3271 -1 474 279 0 8 chr5 197278636 197278758 -2351392 - MER45A DNA AcHobo 0 178 58 237 341 37 0 chr5 197279014 197279096 -2351054 - L2 LINE L2 0 3313 3229 227 273 0 52 chr5 197279110 197279187 -2350963 + MIR SINE MIR 74 146 -62 183 186 68 17 chr5 197279270 197279329 -2350821 + MIR3 SINE MIR 7 68 -140 373 325 135 25 chr5 197279338 197279538 -2350612 + MIR SINE MIR 29 250 -12 478 315 62 39 chr5 197279825 197280082 -2350068 + L1ME LINE L1 5254 5516 -605 614 315 85 23 chr5 197281117 197281621 -2348529 + L2 LINE L2 2723 3269 -3 1959 206 93 17 chr5 197285000 197285462 -2344688 + MLT1D LTR MaLR 5 501 -4 228 218 0 0 chr5 197286861 197286916 -2343234 + Charlie8 DNA MER1_type 89 143 -2274 1302 241 76 19 chr5 197287685 197288096 -2342054 + MLT1D LTR MaLR 1 440 -65 2328 121 45 22 chr5 197288096 197288452 -2341698 - THE1B LTR MaLR 0 364 1 1302 241 76 19 chr5 197288452 197288472 -2341678 + MLT1D LTR MaLR 440 457 -48 195 42 0 0 chr5 197289310 197289334 -2340816 + (CA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr5 197291355 197291376 -2338774 + GC_rich Low_complexity Low_complexity 1 21 0 232 347 82 6 chr5 197292277 197292447 -2337703 + Charlie8 DNA MER1_type 1 183 -2234 266 132 0 29 chr5 197292875 197292943 -2337207 + (CCCTG)n Simple_repeat Simple_repeat 4 69 0 408 212 44 18 chr5 197293098 197293211 -2336939 + Charlie8 DNA MER1_type 47 162 -2255 201 374 53 20 chr5 197293615 197293861 -2336289 - L2 LINE L2 -163 3109 2856 930 255 113 28 chr5 197294192 197294651 -2335499 + MLT1D LTR MaLR 8 505 0 240 338 26 0 chr5 197295394 197295471 -2334679 - MIR3 SINE MIR -48 160 82 261 275 206 38 chr5 197298946 197299077 -2331073 + MIR3 SINE MIR 17 169 -39 236 143 0 0 chr5 197299097 197299139 -2331011 - L1MB7 LINE L1 -134 6050 6009 462 252 58 0 chr5 197299350 197299489 -2330661 + MER113 DNA MER1_type? 292 438 -83 2225 113 0 0 chr5 197299490 197299790 -2330360 - AluSx SINE Alu -12 300 1 3655 187 66 16 chr5 197299800 197301311 -2328839 - L1MB7 LINE L1 0 6184 4601 837 97 0 9 chr5 197301425 197301538 -2328612 + AluY SINE Alu 1 112 -199 472 343 59 61 chr5 197301879 197302270 -2327880 + L1MDa LINE L1 2159 2548 -3992 1570 130 54 18 chr5 197302282 197302558 -2327592 + AluSg SINE Alu 24 309 -1 189 0 0 0 chr5 197302577 197302598 -2327552 + (TTA)n Simple_repeat Simple_repeat 2 22 0 269 71 0 0 chr5 197302604 197302646 -2327504 + Alu SINE Alu 248 289 -13 2166 127 0 0 chr5 197302658 197302966 -2327184 + AluSg SINE Alu 3 310 0 2098 117 0 16 chr5 197302987 197303294 -2326856 - AluSx SINE Alu -10 302 1 333 357 156 0 chr5 197303501 197303700 -2326450 + MIR SINE MIR 2 231 -31 2150 100 3 13 chr5 197304539 197304848 -2325302 + AluSx SINE Alu 1 306 -6 1496 202 56 35 chr5 197305302 197305679 -2324471 - MLT1B LTR MaLR -5 385 1 208 171 24 0 chr5 197307513 197307554 -2322596 + (CACAG)n Simple_repeat Simple_repeat 5 46 0 1707 247 52 121 chr5 197307801 197308659 -2321491 + L1MC4a LINE L1 6843 7618 -190 2610 174 60 2 chr5 197308659 197309090 -2321060 + MSTB2 LTR MaLR 1 456 -1 1707 247 52 121 chr5 197309090 197309269 -2320881 + L1MC4a LINE L1 7618 7808 0 397 221 34 0 chr5 197309388 197309509 -2320641 - L2 LINE L2 -313 3000 2871 1452 199 7 24 chr5 197310337 197310650 -2319500 - AluJo SINE Alu 0 308 1 1924 133 6 38 chr5 197312217 197312532 -2317618 - AluSg SINE Alu -5 305 1 1523 167 42 4 chr5 197312613 197312877 -2317273 + AluJo SINE Alu 21 294 -18 1346 199 38 0 chr5 197316909 197317201 -2312949 + MLT1A1 LTR MaLR 55 357 -8 1632 217 35 51 chr5 197317815 197317863 -2312287 - MLT1D LTR MaLR -20 485 438 2290 68 0 0 chr5 197317863 197318144 -2312006 + AluY SINE Alu 3 283 -28 423 0 0 0 chr5 197318144 197318191 -2311959 + (CA)n Simple_repeat Simple_repeat 2 48 0 1632 217 35 51 chr5 197318191 197318456 -2311694 - MLT1D LTR MaLR -66 439 179 2346 68 0 3 chr5 197318456 197318752 -2311398 + AluY SINE Alu 15 309 -2 1632 217 35 51 chr5 197318752 197318929 -2311221 - MLT1D LTR MaLR -326 179 1 205 306 67 52 chr5 197319189 197319323 -2310827 + L2 LINE L2 3137 3272 0 308 294 184 15 chr5 197319901 197320037 -2310113 + MIR SINE MIR 49 207 -55 379 272 22 0 chr5 197320050 197320142 -2310008 - MIR SINE MIR -108 154 61 1369 73 0 11 chr5 197320812 197320991 -2309159 + AluY SINE Alu 1 177 -134 261 0 0 0 chr5 197321012 197321041 -2309109 + (A)n Simple_repeat Simple_repeat 1 29 0 581 256 12 116 chr5 197321367 197321714 -2308436 - L2 LINE L2 -223 3049 2739 3440 246 85 40 chr5 197322727 197325193 -2304957 + L1ME LINE L1 465 4073 -2007 414 319 250 2 chr5 197326130 197326618 -2303532 + L2 LINE L2 2650 3283 -30 1915 108 3 10 chr5 197328103 197328391 -2301759 + AluSg SINE Alu 23 308 -2 193 129 125 42 chr5 197328395 197328466 -2301684 + MIR SINE MIR 61 148 -60 388 228 234 0 chr5 197329203 197329348 -2300802 + MER5A DNA MER1_type 11 189 0 2659 151 47 4 chr5 197330079 197330544 -2299606 + MER31A LTR ERV1 1 485 0 1384 230 48 48 chr5 197330706 197330862 -2299288 + MLT1D LTR MaLR 2 157 -348 1464 206 97 3 chr5 197330862 197331192 -2298958 + MLT1A1 LTR MaLR 5 365 0 1384 230 48 48 chr5 197331192 197331539 -2298611 + MLT1D LTR MaLR 156 505 0 316 244 0 0 chr5 197331622 197331700 -2298450 + HAL1 LINE L1 2245 2322 -185 200 205 0 0 chr5 197331957 197331996 -2298154 + (CA)n Simple_repeat Simple_repeat 2 40 0 209 200 0 0 chr5 197332043 197332083 -2298067 + (CA)n Simple_repeat Simple_repeat 2 41 0 209 200 0 0 chr5 197332215 197332255 -2297895 + (CA)n Simple_repeat Simple_repeat 2 41 0 189 0 0 0 chr5 197332864 197332885 -2297265 + (GCGTG)n Simple_repeat Simple_repeat 4 24 0 180 254 221 57 chr5 197333039 197333161 -2296989 - MIR SINE MIR -112 150 9 264 348 6 11 chr5 197334410 197334588 -2295562 + HAL1 LINE L1 1296 1472 -1035 1603 165 35 18 chr5 197335137 197335422 -2294728 + AluJo SINE Alu 5 294 -18 201 250 0 0 chr5 197335467 197335527 -2294623 + GA-rich Low_complexity Low_complexity 1 60 0 339 303 19 26 chr5 197337524 197337679 -2292471 + (CACG)n Simple_repeat Simple_repeat 1 154 0 354 243 57 14 chr5 197337841 197338027 -2292123 + (CATG)n Simple_repeat Simple_repeat 1 193 0 2126 109 0 39 chr5 197338779 197339090 -2291060 - AluY SINE Alu -12 299 1 966 293 24 38 chr5 197339166 197339616 -2290534 + MLT1K LTR MaLR 145 588 0 304 380 64 18 chr5 197340392 197340563 -2289587 + L1ME4a LINE L1 5801 5979 -142 246 266 38 13 chr5 197340814 197340893 -2289257 - MIR SINE MIR -119 143 63 588 324 44 0 chr5 197342026 197342301 -2287849 + Charlie4a DNA MER1_type 39 325 -183 2202 176 22 20 chr5 197342301 197342800 -2287350 + L1MB8 LINE L1 5679 6178 0 2021 139 3 3 chr5 197342854 197343163 -2286987 - AluSx SINE Alu -3 309 1 400 262 90 0 chr5 197343163 197343285 -2286865 + Charlie4a DNA MER1_type 362 494 -14 181 344 43 11 chr5 197343435 197343528 -2286622 - L3 LINE CR1 -583 994 899 243 88 0 0 chr5 197343646 197343680 -2286470 + (A)n Simple_repeat Simple_repeat 1 34 0 750 286 74 9 chr5 197344033 197344264 -2285886 - MIR SINE MIR -10 252 7 190 379 26 52 chr5 197344222 197344375 -2285775 + MIR SINE MIR 7 155 -107 * 2303 52 0 49 chr5 197345129 197345454 -2284696 + AluY SINE Alu 3 311 0 1234 211 84 68 chr5 197346052 197346493 -2283657 + MLT1D LTR MaLR 58 505 0 249 218 0 103 chr5 197347074 197347161 -2282989 + MLT1H LTR MaLR 465 536 -13 1734 188 0 25 chr5 197347523 197347837 -2282313 - AluJo SINE Alu -6 306 1 2261 72 0 26 chr5 197348140 197348445 -2281705 - AluY SINE Alu -14 297 1 263 231 16 48 chr5 197348946 197349132 -2281018 + CT-rich Low_complexity Low_complexity 1 180 0 2821 16 0 0 chr5 197350211 197350528 -2279622 - AluYb8 SINE Alu -1 317 1 439 342 76 50 chr5 197350761 197351019 -2279131 - L1M4 LINE L1 -1080 5066 4795 2401 75 0 0 chr5 197351019 197351327 -2278823 - AluY SINE Alu -3 308 1 439 342 76 50 chr5 197351327 197351410 -2278740 - L1M4 LINE L1 -1351 4795 4716 206 371 0 0 chr5 197351434 197351496 -2278654 + L2 LINE L2 3251 3312 -1 2454 46 0 13 chr5 197352043 197352347 -2277803 + AluY SINE Alu 2 301 -10 310 253 36 0 chr5 197353143 197353226 -2276924 + Charlie8 DNA MER1_type 1 86 -2331 243 88 0 0 chr5 197353480 197353514 -2276636 + (TCTCCC)n Simple_repeat Simple_repeat 5 38 0 251 295 0 39 chr5 197353631 197353709 -2276441 + MIR SINE MIR 117 191 -71 2994 219 60 31 chr5 197353947 197355043 -2275107 - L1ME LINE L1 -4512 1568 474 507 206 7 51 chr5 197355202 197355353 -2274797 + L1 LINE L1 4046 4193 -1953 874 229 6 6 chr5 197355364 197355547 -2274603 + L1MB8 LINE L1 5995 6177 -1 207 273 91 23 chr5 197356061 197356149 -2274001 + MIR SINE MIR 3 96 -166 346 307 61 0 chr5 197356386 197356500 -2273650 + L1 LINE L1 4884 5004 -1142 180 321 67 37 chr5 197356855 197356989 -2273161 - MIR SINE MIR -111 151 14 1800 159 0 3 chr5 197357193 197357476 -2272674 + AluSx SINE Alu 1 282 -30 195 69 0 0 chr5 197357480 197357509 -2272641 + (TA)n Simple_repeat Simple_repeat 2 30 0 393 211 134 14 chr5 197357771 197357913 -2272237 + L1MB7 LINE L1 6026 6184 0 2189 130 0 0 chr5 197357923 197358223 -2271927 + AluSx SINE Alu 1 300 -12 475 259 58 0 chr5 197358224 197358363 -2271787 - MER113 DNA MER1_type? -83 438 292 248 143 0 0 chr5 197358574 197358616 -2271534 + L1MB7 LINE L1 6009 6050 -134 221 311 14 0 chr5 197358636 197358710 -2271440 - MIR3 SINE MIR -39 169 95 301 294 184 15 chr5 197359411 197359547 -2270603 + MIR SINE MIR 49 207 -55 371 272 22 0 chr5 197359560 197359652 -2270498 - MIR SINE MIR -108 154 61 705 154 43 19 chr5 197360323 197360485 -2269665 + AluY SINE Alu 2 167 -144 1850 162 0 3 chr5 197360723 197361031 -2269119 + AluY SINE Alu 3 309 -2 1959 284 52 67 chr5 197361164 197362075 -2268075 + L1M4 LINE L1 14 910 -5632 646 198 64 37 chr5 197363692 197363879 -2266271 + L1MC4a LINE L1 7616 7807 -1 313 267 105 33 chr5 197364188 197364429 -2265721 - L2 LINE L2 -24 3248 2454 1826 260 61 48 chr5 197365192 197365590 -2264560 - L1MEc LINE L1 -4086 2310 1918 180 0 0 0 chr5 197365590 197365610 -2264540 + (TA)n Simple_repeat Simple_repeat 1 20 0 1826 260 61 48 chr5 197365610 197366251 -2263899 - L1MEc LINE L1 -4478 1918 1258 1028 244 30 4 chr5 197366363 197366629 -2263521 + MLT1A1 LTR MaLR 85 357 -8 1761 156 77 97 chr5 197367246 197367293 -2262857 - MLT1D LTR MaLR -21 484 438 2174 93 0 0 chr5 197367293 197367572 -2262578 + AluY SINE Alu 3 281 -30 279 0 0 0 chr5 197367574 197367605 -2262545 + (CA)n Simple_repeat Simple_repeat 2 32 0 1761 156 77 97 chr5 197367605 197367870 -2262280 - MLT1D LTR MaLR -68 437 180 2441 68 0 3 chr5 197367870 197368163 -2261987 + AluY SINE Alu 15 306 -5 1761 156 77 97 chr5 197368163 197368340 -2261810 - MLT1D LTR MaLR -325 180 1 351 212 19 48 chr5 197368870 197369010 -2261140 - MLT1D LTR MaLR -440 65 4 389 285 123 15 chr5 197369043 197369151 -2260999 + L1ME2 LINE L1 4887 5014 -1132 2204 99 0 27 chr5 197369151 197369465 -2260685 + AluY SINE Alu 1 306 0 389 285 123 15 chr5 197369465 197369485 -2260665 + L1ME2 LINE L1 5014 5030 -1116 3451 162 41 66 chr5 197369485 197370352 -2259798 + L1MB7 LINE L1 5329 6168 -16 767 174 151 9 chr5 197370367 197370585 -2259565 + Cheshire DNA MER1_type 2012 2260 -160 2911 228 54 13 chr5 197370602 197371627 -2258523 + L1ME2 LINE L1 5016 6091 -73 531 0 0 0 chr5 197371631 197371690 -2258460 + (TA)n Simple_repeat Simple_repeat 1 59 0 1930 138 9 3 chr5 197371695 197372014 -2258136 + THE1A LTR MaLR 12 332 -23 3187 251 57 18 chr5 197372116 197372383 -2257767 + L1MD2 LINE L1 1625 1880 -4335 180 0 0 0 chr5 197372383 197372403 -2257747 + (TA)n Simple_repeat Simple_repeat 1 20 0 3187 251 57 18 chr5 197372403 197373846 -2256304 + L1MD2 LINE L1 1880 3351 -2864 297 130 0 0 chr5 197373855 197373909 -2256241 - L1MA8 LINE L1 -19 6272 6219 611 270 0 0 chr5 197373913 197374098 -2256052 + L1MD2 LINE L1 3352 3536 -2679 545 281 211 20 chr5 197374099 197374398 -2255752 - MLT1H1 LTR MaLR -2 553 198 863 219 45 12 chr5 197374406 197374652 -2255498 + L1MD2 LINE L1 4708 4961 -1254 966 229 82 66 chr5 197374653 197374958 -2255192 - MLT1E1 LTR MaLR 0 654 345 360 176 0 0 chr5 197374993 197375061 -2255089 - MLT1E1 LTR MaLR -418 236 169 705 210 55 25 chr5 197375065 197375265 -2254885 - MLT1D LTR MaLR -187 318 113 22 0 0 0 chr5 197375385 197375407 -2254743 + AT_rich Low_complexity Low_complexity 1 22 0 297 0 0 0 chr5 197375407 197375440 -2254710 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 213 0 13 chr5 197375440 197375515 -2254635 + L1ME3 LINE L1 6082 6155 -7 2248 91 0 42 chr5 197375540 197375848 -2254302 + AluY SINE Alu 1 295 -16 2311 89 31 0 chr5 197375848 197376141 -2254009 + AluY SINE Alu 1 302 -9 188 173 39 0 chr5 197376339 197376391 -2253759 + GA-rich Low_complexity Low_complexity 2 55 0 2459 104 13 11 chr5 197376625 197376999 -2253151 + THE1C LTR MaLR 1 375 0 10064 116 12 31 chr5 197376999 197378609 -2251541 + THE1C-int LTR MaLR 1 1580 0 2227 123 19 13 chr5 197378609 197378982 -2251168 + THE1C LTR MaLR 1 375 0 671 249 105 51 chr5 197379007 197379360 -2250790 + MLT1J2 LTR MaLR 45 416 -34 1193 257 125 16 chr5 197379490 197379594 -2250556 + L1MD2 LINE L1 5352 5443 -985 2435 62 31 0 chr5 197379594 197379885 -2250265 + AluY SINE Alu 1 300 -11 1193 257 125 16 chr5 197379885 197380531 -2249619 + L1MD2 LINE L1 5443 6199 -229 186 288 75 0 chr5 197381603 197381683 -2248467 + L2 LINE L2 3138 3223 -49 332 209 0 0 chr5 197384970 197385037 -2245113 - MLT1A1 LTR MaLR -54 320 254 21 0 0 0 chr5 197385037 197385058 -2245092 + AT_rich Low_complexity Low_complexity 1 21 0 2136 120 17 0 chr5 197385059 197385351 -2244799 - AluSx SINE Alu -15 297 1 1103 132 42 142 chr5 197385351 197385639 -2244511 - MLT1A1 LTR MaLR -106 259 1 227 323 11 0 chr5 197385659 197385752 -2244398 - L1M4 LINE L1 -1488 4658 4565 2477 70 0 0 chr5 197385811 197386111 -2244039 - AluY SINE Alu -9 302 3 21 0 0 0 chr5 197387141 197387162 -2242988 + AT_rich Low_complexity Low_complexity 1 21 0 1885 97 0 4 chr5 197387162 197387399 -2242751 + AluSq SINE Alu 1 236 -77 2369 83 0 10 chr5 197389186 197389487 -2240663 + AluY SINE Alu 1 298 -13 240 35 0 0 chr5 197389513 197389542 -2240608 + (CA)n Simple_repeat Simple_repeat 1 29 0 310 316 78 39 chr5 197389551 197389886 -2240264 + L1MEc LINE L1 -99 248 -6013 895 176 24 12 chr5 197390156 197390326 -2239824 + MER20 DNA MER1_type 45 216 -3 357 259 12 0 chr5 197390366 197390451 -2239699 + MLT1F1 LTR MaLR 3 88 -454 * 1247 243 33 3 chr5 197390440 197390744 -2239406 + MLT1F1 LTR MaLR 255 567 0 796 266 45 31 chr5 197390751 197391277 -2238873 + L1MEc LINE L1 520 995 -5075 189 371 6 28 chr5 197391544 197391722 -2238428 + L2 LINE L2 2631 2804 -510 588 292 14 27 chr5 197392640 197392859 -2237291 + MLT1K LTR MaLR 350 565 -23 2266 122 0 3 chr5 197394334 197394646 -2235504 - AluSx SINE Alu -1 311 1 305 313 62 0 chr5 197395325 197395453 -2234697 - L1 LINE L1 -1127 5019 4884 483 352 68 24 chr5 197396021 197396441 -2233709 - L1ME LINE L1 -540 5630 5162 2405 73 3 3 chr5 197396441 197396741 -2233409 - AluY SINE Alu -11 300 1 483 352 68 24 chr5 197396741 197397060 -2233090 - L1ME LINE L1 -1008 5162 4859 562 135 8 113 chr5 197397222 197397290 -2232860 - MLT1A1 LTR MaLR 0 365 316 1768 165 9 58 chr5 197397290 197397618 -2232532 - AluJb SINE Alu 0 312 1 562 135 8 113 chr5 197397618 197397682 -2232468 - MLT1A1 LTR MaLR -49 316 247 213 262 50 50 chr5 197398287 197398428 -2231722 - MIR3 SINE MIR -57 151 11 2735 37 0 0 chr5 197399745 197400044 -2230106 - AluY SINE Alu -12 299 1 396 0 0 0 chr5 197400135 197400179 -2229971 + (TG)n Simple_repeat Simple_repeat 2 45 0 252 274 21 32 chr5 197401638 197401733 -2228417 + MIR SINE MIR 134 227 -35 267 335 113 0 chr5 197405739 197405960 -2224190 + L2 LINE L2 2454 2699 -615 294 180 0 0 chr5 197406085 197406146 -2224004 + GA-rich Low_complexity Low_complexity 1 61 0 1881 155 0 26 chr5 197406182 197406492 -2223658 - AluJb SINE Alu -4 308 7 574 183 124 13 chr5 197406495 197406648 -2223502 - MLT1B LTR MaLR -216 174 5 495 172 26 9 chr5 197407043 197407159 -2222991 + MSTB1 LTR MaLR 1 118 -314 915 108 23 0 chr5 197407168 197407298 -2222852 + AluSp SINE Alu 1 133 -180 906 174 55 9 chr5 197407434 197407652 -2222498 + MSTB1 LTR MaLR 192 419 -13 238 239 55 90 chr5 197407880 197408081 -2222069 - L1MC/D LINE L1 -2037 5771 5578 350 311 67 0 chr5 197408592 197408727 -2221423 + MIR3 SINE MIR 54 197 -11 192 333 76 28 chr5 197408969 197409113 -2221037 + L2 LINE L2 2383 2533 -781 213 271 21 0 chr5 197411017 197411065 -2219085 + L2 LINE L2 3208 3256 -16 1768 206 60 0 chr5 197412581 197412949 -2217201 - MLT1B LTR MaLR 0 390 1 525 232 71 26 chr5 197412956 197413111 -2217039 - MIR SINE MIR -21 241 80 331 341 43 20 chr5 197414376 197414619 -2215531 + MIR SINE MIR 2 254 -8 1928 210 81 5 chr5 197416521 197416917 -2213233 - MSTB LTR MaLR 0 426 1 294 266 3 108 chr5 197417260 197417638 -2212512 + G-rich Low_complexity Low_complexity 1 338 0 1981 99 0 58 chr5 197417736 197417883 -2212267 + AluSx SINE Alu 1 122 -190 2317 73 0 10 chr5 197417883 197418186 -2211964 + AluY SINE Alu 1 300 -11 1981 99 0 58 chr5 197418186 197418350 -2211800 + AluSx SINE Alu 122 294 -18 720 236 0 0 chr5 197419345 197419523 -2210627 + GA-rich Low_complexity Low_complexity 2 179 0 802 233 94 23 chr5 197419701 197419967 -2210183 - MER21B LTR ERV1 -51 812 528 862 224 73 8 chr5 197420012 197420257 -2209893 - MER21B LTR ERV1 -316 547 287 363 236 11 0 chr5 197420373 197420462 -2209688 - MER21B LTR ERV1 -773 90 1 356 208 10 0 chr5 197420584 197420680 -2209470 + G-rich Low_complexity Low_complexity 4 100 0 373 344 8 0 chr5 197421283 197421408 -2208742 + MER5B DNA MER1_type 19 144 -34 2070 121 23 0 chr5 197421485 197421790 -2208360 - AluSx SINE Alu 0 312 1 353 395 46 28 chr5 197422306 197422524 -2207626 + L1M4 LINE L1 3914 4135 -2011 370 309 42 0 chr5 197422530 197422695 -2207455 + L1M4 LINE L1 4174 4345 -1801 313 283 62 62 chr5 197422698 197422875 -2207275 + L1M4 LINE L1 4371 4547 -1599 1123 202 3 18 chr5 197423089 197423380 -2206770 - MER33 DNA MER1_type -50 274 1 484 232 28 7 chr5 197423705 197423847 -2206303 - MER21B LTR ERV1 -416 447 303 296 256 225 0 chr5 197424135 197424264 -2205886 + HsTC2 DNA Tc2 229 386 -1512 441 280 0 0 chr5 197424429 197424536 -2205614 + HsTC2 DNA Tc2 1792 1898 0 314 340 13 6 chr5 197425239 197425395 -2204755 + (CA)n Simple_repeat Simple_repeat 1 157 0 183 281 94 0 chr5 197426177 197426241 -2203909 + MIR SINE MIR 101 170 -92 356 326 54 43 chr5 197426541 197426820 -2203330 - L2 LINE L2 -495 2819 2538 395 268 123 17 chr5 197427267 197427446 -2202704 + MLT1K LTR MaLR 383 580 -8 468 324 130 5 chr5 197428456 197428663 -2201487 + MIR SINE MIR 2 234 -28 226 325 98 8 chr5 197428914 197429037 -2201113 + MIR SINE MIR 74 207 -55 693 159 0 0 chr5 197429139 197429246 -2200904 + AluSp SINE Alu 1 107 -206 219 139 0 0 chr5 197429246 197429282 -2200868 + (GGAA)n Simple_repeat Simple_repeat 4 39 0 203 152 22 0 chr5 197429272 197429318 -2200832 + GA-rich Low_complexity Low_complexity 3 49 0 * 2298 74 0 46 chr5 197429318 197429641 -2200509 + AluY SINE Alu 1 308 -3 260 348 19 0 chr5 197431206 197431367 -2198783 + (CA)n Simple_repeat Simple_repeat 2 165 0 21 0 0 0 chr5 197432964 197432985 -2197165 + GC_rich Low_complexity Low_complexity 1 21 0 303 161 0 0 chr5 197433132 197433188 -2196962 + (CAG)n Simple_repeat Simple_repeat 3 58 0 236 133 48 12 chr5 197433394 197433477 -2196673 + GA-rich Low_complexity Low_complexity 2 87 0 24 0 0 0 chr5 197433517 197433541 -2196609 + GC_rich Low_complexity Low_complexity 1 24 0 27 29 0 0 chr5 197433617 197433651 -2196499 + GC_rich Low_complexity Low_complexity 1 34 0 373 272 0 0 chr5 197434743 197434835 -2195315 + Charlie8 DNA MER1_type 104 195 -2222 205 268 70 0 chr5 197434981 197435052 -2195098 - L2 LINE L2 -211 3061 2986 590 239 137 32 chr5 197435250 197435534 -2194616 + MER113 DNA MER1_type? 131 444 -77 212 125 21 21 chr5 197435856 197435904 -2194246 + A-rich Low_complexity Low_complexity 1 48 0 248 273 141 0 chr5 197437514 197437613 -2192537 - MLT1L LTR MaLR 0 615 503 411 199 130 15 chr5 197439636 197439767 -2190383 + MIR SINE MIR 46 191 -71 1542 196 25 0 chr5 197439771 197440051 -2190099 - AluJb SINE Alu -23 289 3 250 236 0 0 chr5 197440363 197440418 -2189732 + L2 LINE L2 3258 3312 -1 519 296 114 0 chr5 197440574 197440794 -2189356 - L2 LINE L2 -344 2970 2726 2349 58 0 29 chr5 197440797 197441105 -2189045 + AluY SINE Alu 1 299 -12 268 294 33 52 chr5 197441673 197441826 -2188324 + Charlie8 DNA MER1_type 70 219 -2198 25 31 0 0 chr5 197444782 197444814 -2185336 + AT_rich Low_complexity Low_complexity 1 32 0 431 279 20 54 chr5 197445396 197445600 -2184550 + Charlie8 DNA MER1_type 4 200 -2217 424 248 75 47 chr5 197445825 197446039 -2184111 - MLT1H LTR MaLR -293 256 37 1464 215 38 83 chr5 197446039 197446305 -2183845 + MLT1C LTR MaLR 1 237 -230 1161 219 56 107 chr5 197446305 197446715 -2183435 + MLT1B LTR MaLR 2 390 0 1464 215 38 83 chr5 197446715 197446927 -2183223 + MLT1C LTR MaLR 237 457 -10 570 124 0 21 chr5 197447007 197447104 -2183046 + MSTD LTR MaLR 1 95 -301 696 182 115 0 chr5 197447116 197447281 -2182869 + MSTD LTR MaLR 213 396 0 2256 76 0 23 chr5 197447872 197448176 -2181974 + AluY SINE Alu 1 297 -14 1734 188 0 25 chr5 197448479 197448793 -2181357 + AluJo SINE Alu 1 306 -6 249 218 0 103 chr5 197449155 197449242 -2180908 - MLT1H LTR MaLR -13 536 465 1234 211 84 68 chr5 197449823 197450264 -2179886 - MLT1D LTR MaLR 0 505 58 2314 56 0 46 chr5 197450864 197451188 -2178962 - AluY SINE Alu 0 311 3 839 284 93 23 chr5 197451381 197451811 -2178339 - MLT1K LTR MaLR -25 563 104 796 216 65 0 chr5 197451945 197452130 -2178020 - MLT1B LTR MaLR -2 388 192 885 162 3 17 chr5 197452164 197452451 -2177699 + GA-rich Low_complexity Low_complexity 1 283 0 413 238 9 32 chr5 197452729 197452978 -2177172 + CT-rich Low_complexity Low_complexity 1 243 0 802 233 94 23 chr5 197453171 197453437 -2176713 - MER21B LTR ERV1 -51 812 528 862 224 73 8 chr5 197453482 197453727 -2176423 - MER21B LTR ERV1 -316 547 287 363 236 11 0 chr5 197453843 197453932 -2176218 - MER21B LTR ERV1 -773 90 1 356 208 10 0 chr5 197454054 197454150 -2176000 + G-rich Low_complexity Low_complexity 4 100 0 373 344 8 0 chr5 197454753 197454878 -2175272 + MER5B DNA MER1_type 19 144 -34 2070 121 23 0 chr5 197454955 197455260 -2174890 - AluSx SINE Alu 0 312 1 353 395 46 28 chr5 197455776 197455994 -2174156 + L1 LINE L1 3914 4135 -2011 370 309 42 0 chr5 197456000 197456165 -2173985 + L1 LINE L1 4174 4345 -1801 1123 202 3 18 chr5 197456559 197456850 -2173300 - MER33 DNA MER1_type -50 274 1 484 232 28 7 chr5 197457176 197457318 -2172832 - MER21B LTR ERV1 -416 447 303 283 264 225 0 chr5 197457606 197457735 -2172415 + HsTC2 DNA Tc2 229 386 -1512 431 290 0 0 chr5 197457900 197458007 -2172143 + HsTC2 DNA Tc2 1792 1898 0 300 346 13 6 chr5 197458707 197458863 -2171287 + (CA)n Simple_repeat Simple_repeat 1 157 0 183 281 94 0 chr5 197459645 197459709 -2170441 + MIR SINE MIR 101 170 -92 356 326 54 43 chr5 197460009 197460288 -2169862 - L2 LINE L2 -495 2819 2538 395 268 123 17 chr5 197460735 197460914 -2169236 + MLT1K LTR MaLR 383 580 -8 468 324 130 5 chr5 197461924 197462131 -2168019 + MIR SINE MIR 2 234 -28 226 325 98 8 chr5 197462382 197462505 -2167645 + MIR SINE MIR 74 207 -55 706 149 0 0 chr5 197462607 197462714 -2167436 + AluSp SINE Alu 1 107 -206 219 139 0 0 chr5 197462714 197462750 -2167400 + (GGAA)n Simple_repeat Simple_repeat 4 39 0 203 152 22 0 chr5 197462740 197462786 -2167364 + GA-rich Low_complexity Low_complexity 3 49 0 * 2265 80 0 46 chr5 197462786 197463110 -2167040 + AluY SINE Alu 1 309 -2 260 348 19 0 chr5 197464672 197464833 -2165317 + (CA)n Simple_repeat Simple_repeat 2 165 0 21 0 0 0 chr5 197466430 197466451 -2163699 + GC_rich Low_complexity Low_complexity 1 21 0 303 161 0 0 chr5 197466598 197466654 -2163496 + (CAG)n Simple_repeat Simple_repeat 3 58 0 236 133 48 12 chr5 197466860 197466943 -2163207 + GA-rich Low_complexity Low_complexity 2 87 0 24 0 0 0 chr5 197466983 197467007 -2163143 + GC_rich Low_complexity Low_complexity 1 24 0 27 29 0 0 chr5 197467083 197467117 -2163033 + GC_rich Low_complexity Low_complexity 1 34 0 375 286 0 0 chr5 197468210 197468308 -2161842 + Charlie8 DNA MER1_type 104 201 -2216 205 268 70 0 chr5 197468448 197468519 -2161631 - L2 LINE L2 -211 3061 2986 590 239 137 32 chr5 197468717 197469001 -2161149 + MER113 DNA MER1_type? 131 444 -77 212 125 21 21 chr5 197469323 197469371 -2160779 + A-rich Low_complexity Low_complexity 1 48 0 248 273 141 0 chr5 197470981 197471080 -2159070 - MLT1L LTR MaLR 0 615 503 401 206 130 15 chr5 197473103 197473234 -2156916 + MIR SINE MIR 46 191 -71 1542 196 25 0 chr5 197473238 197473518 -2156632 - AluJb SINE Alu -23 289 3 250 236 0 0 chr5 197473830 197473885 -2156265 + L2 LINE L2 3258 3312 -1 519 296 114 0 chr5 197474041 197474261 -2155889 - L2 LINE L2 -344 2970 2726 2369 55 0 26 chr5 197474264 197474571 -2155579 + AluY SINE Alu 1 299 -12 305 281 33 52 chr5 197475140 197475293 -2154857 + Charlie8 DNA MER1_type 59 208 -2209 312 27 0 0 chr5 197478394 197478431 -2151719 + (CA)n Simple_repeat Simple_repeat 2 38 0 291 319 59 28 chr5 197478940 197479194 -2150956 - MLT1K LTR MaLR -284 304 43 281 362 40 11 chr5 197479489 197479663 -2150487 + L3 LINE CR1 816 994 -583 400 262 90 0 chr5 197479813 197479935 -2150215 - Charlie4 DNA MER1_type -14 1947 1815 359 127 0 0 chr5 197479935 197479990 -2150160 + Alu SINE Alu 1 55 -244 2003 99 0 69 chr5 197531701 197532033 -2098117 + AluSg SINE Alu 1 309 -1 25 31 0 0 chr5 197532554 197532586 -2097564 + GC_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5 197532661 197532690 -2097460 + GC_rich Low_complexity Low_complexity 1 29 0 201 196 0 0 chr5 197532868 197532914 -2097236 + (CCCCAG)n Simple_repeat Simple_repeat 6 51 0 330 105 0 35 chr5 197532966 197533052 -2097098 + (CGGG)n Simple_repeat Simple_repeat 4 86 0 1950 129 14 0 chr5 197533204 197533498 -2096652 - AluSx SINE Alu -14 298 1 2577 117 7 38 chr5 197533498 197533719 -2096431 - Tigger1 DNA MER2_type -1797 621 418 1871 136 34 0 chr5 197533719 197534013 -2096137 - AluSx SINE Alu 0 312 9 2577 117 7 38 chr5 197534013 197534211 -2095939 - Tigger1 DNA MER2_type -2000 418 215 885 181 0 0 chr5 197534313 197534457 -2095693 - MSTB LTR MaLR -282 144 1 1492 159 53 3 chr5 197536237 197536577 -2093573 + Charlie5 DNA MER1_type 2265 2621 0 489 335 68 16 chr5 197536586 197536777 -2093373 + L1M4 LINE L1 3599 3799 -2347 474 181 64 0 chr5 197536926 197537020 -2093130 + MER2 DNA MER2_type 1 100 -245 320 229 43 0 chr5 197537022 197537092 -2093058 + Tigger5 DNA MER2_type 5 77 -2246 279 222 0 0 chr5 197537093 197537147 -2093003 - Tigger5 DNA MER2_type -3 2320 2267 * 332 200 0 27 chr5 197537142 197537217 -2092933 + Tigger5 DNA MER2_type 2251 2323 0 1545 93 5 5 chr5 197537395 197537609 -2092541 - AluY SINE Alu -97 214 1 697 213 20 145 chr5 197537640 197537909 -2092241 + L1MC5 LINE L1 6740 6956 -1005 1695 276 55 9 chr5 197537909 197538438 -2091712 + MLT1H1 LTR MaLR 1 553 -2 697 213 20 145 chr5 197538438 197538520 -2091630 + L1MC5 LINE L1 6956 7047 -914 2319 86 0 10 chr5 197538540 197538853 -2091297 + AluY SINE Alu 1 310 -1 456 268 13 0 chr5 197538862 197539027 -2091123 + L1MB8 LINE L1 3319 3485 -2661 370 143 46 9 chr5 197539081 197539186 -2090964 + AluJb SINE Alu 1 135 -167 2843 198 103 20 chr5 197539216 197539277 -2090873 + L1MB8 LINE L1 5115 5170 -1008 4231 151 54 44 chr5 197539277 197540051 -2090099 + LTR1 LTR ERV1 1 782 -3 2843 198 103 20 chr5 197540051 197540523 -2089627 + L1MB8 LINE L1 5170 5601 -577 2319 69 0 16 chr5 197540523 197540829 -2089321 + AluY SINE Alu 5 305 -6 2843 198 103 20 chr5 197540829 197541164 -2088986 + L1MB8 LINE L1 5601 6058 -120 1738 135 0 29 chr5 197541165 197541439 -2088711 + AluSx SINE Alu 1 266 -46 185 81 0 27 chr5 197541547 197541584 -2088566 + (CGGG)n Simple_repeat Simple_repeat 2 37 0 223 298 83 12 chr5 197542128 197542212 -2087938 + MIR3 SINE MIR 71 160 -48 1192 154 135 22 chr5 197542227 197542323 -2087827 + AluJb SINE Alu 1 85 -217 207 0 0 0 chr5 197542323 197542346 -2087804 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1192 154 135 22 chr5 197542346 197542516 -2087634 + AluJb SINE Alu 85 297 -5 740 302 64 10 chr5 197542535 197542833 -2087317 + MER102b DNA MER1_type 7 320 -21 656 238 94 77 chr5 197542837 197542932 -2087218 + MER20B DNA MER1_type 6 98 -685 2344 55 0 29 chr5 197542932 197543243 -2086907 - AluY SINE Alu -9 302 1 2091 115 0 0 chr5 197543248 197543543 -2086607 - AluSc SINE Alu -14 295 1 656 238 94 77 chr5 197543543 197543740 -2086410 + MER20B DNA MER1_type 101 309 -474 566 245 53 12 chr5 197543745 197544069 -2086081 - MLT1I LTR MaLR -15 394 1 266 158 333 9 chr5 197544179 197544237 -2085913 + Tigger1 DNA MER2_type 6 44 -2374 2157 87 0 13 chr5 197544237 197544537 -2085613 + AluSq SINE Alu 1 296 -17 266 158 333 9 chr5 197544537 197544592 -2085558 + Tigger1 DNA MER2_type 44 156 -2262 1370 294 185 20 chr5 197544693 197546283 -2083867 + L2 LINE L2 1444 3309 -4 893 194 12 6 chr5 197546398 197546563 -2083587 - FRAM SINE Alu 0 166 1 234 334 249 3 chr5 197546570 197546899 -2083251 - MLT1K LTR MaLR -1 587 178 1196 166 8 46 chr5 197546998 197547239 -2082911 - MER61A LTR ERV1 0 343 112 581 136 192 0 chr5 197547558 197547683 -2082467 - MER61A LTR ERV1 -194 149 1 720 163 52 0 chr5 197548178 197548313 -2081837 + AluSc SINE Alu 168 309 0 1732 250 51 5 chr5 197548411 197548839 -2081311 + MLT1C LTR MaLR 18 465 -2 2243 71 30 0 chr5 197549248 197549543 -2080607 - AluY SINE Alu -7 304 1 1583 130 45 4 chr5 197549602 197549874 -2080276 - AluSq SINE Alu 0 310 29 2329 69 0 3 chr5 197549974 197550265 -2079885 + AluY SINE Alu 12 301 -10 236 280 40 0 chr5 197551599 197551674 -2078476 + MLT1K LTR MaLR 507 584 -4 2128 111 0 3 chr5 197551816 197552135 -2078015 + AluSx SINE Alu 1 312 0 233 362 117 5 chr5 197552248 197552444 -2077706 - MIR SINE MIR -14 248 31 2312 93 0 0 chr5 197552587 197552889 -2077261 + AluSx SINE Alu 1 302 -10 2046 107 0 0 chr5 197553631 197553935 -2076215 + AluSc SINE Alu 1 304 0 239 136 0 0 chr5 197553938 197553982 -2076168 - L1MB7 LINE L1 -15 6169 6126 1758 86 0 16 chr5 197554166 197554411 -2075739 - AluSq SINE Alu -48 265 25 882 171 45 13 chr5 197556804 197557088 -2073062 - MLT1A1 LTR MaLR -2 363 3 2464 63 0 0 chr5 197557135 197557435 -2072715 + AluY SINE Alu 1 300 -11 632 311 66 43 chr5 197557904 197558371 -2071779 - L1M4 LINE L1 -1768 4378 3894 2555 50 0 7 chr5 197558371 197558674 -2071476 + AluY SINE Alu 1 301 -10 632 311 66 43 chr5 197558674 197558765 -2071385 - L1M4 LINE L1 -2252 3894 3807 292 135 0 0 chr5 197558878 197558930 -2071220 + Tigger1 DNA MER2_type 702 753 -1665 * 529 159 84 0 chr5 197558925 197559007 -2071143 + Tigger1 DNA MER2_type 2134 2228 -190 2260 114 0 3 chr5 197559007 197559315 -2070835 - AluSc SINE Alu -2 307 1 529 159 84 0 chr5 197559315 197559339 -2070811 + Tigger1 DNA MER2_type 2228 2249 -169 1804 165 0 14 chr5 197559340 197559625 -2070525 - AluSx SINE Alu -26 286 6 1865 128 35 3 chr5 197559640 197559922 -2070228 - AluSx SINE Alu -21 291 1 1930 156 10 0 chr5 197559981 197560276 -2069874 + AluSx SINE Alu 1 298 -14 908 206 77 0 chr5 197560359 197560553 -2069597 + MER3 DNA MER1_type 1 209 0 351 304 124 16 chr5 197560659 197560981 -2069169 + L1MC4 LINE L1 7686 8042 0 2656 49 0 0 chr5 197560989 197561293 -2068857 + AluY SINE Alu 1 304 -7 2285 111 0 10 chr5 197561298 197561604 -2068546 + AluSg SINE Alu 1 303 -7 2295 92 3 16 chr5 197561604 197561919 -2068231 + AluY SINE Alu 1 311 0 2405 78 3 0 chr5 197562379 197562673 -2067477 - AluY SINE Alu -16 295 1 2590 66 3 0 chr5 197563671 197563973 -2066177 + AluSg SINE Alu 1 303 -7 2326 114 0 0 chr5 197563982 197564281 -2065869 + AluSx SINE Alu 1 299 -13 396 281 4 114 chr5 197564409 197564637 -2065513 - L1MC4 LINE L1 -16 8026 7824 2281 118 0 0 chr5 197564708 197565012 -2065138 + AluSg SINE Alu 1 304 -6 506 152 114 0 chr5 197565045 197565181 -2064969 - L1MA7 LINE L1 -1 6311 6155 2521 91 0 0 chr5 197568230 197568539 -2061611 - AluSx SINE Alu -3 309 1 1612 131 61 67 chr5 197569619 197569916 -2060234 - AluJo SINE Alu -17 295 1 264 322 103 7 chr5 197570974 197571120 -2059030 + MIR SINE MIR 65 224 -38 894 136 9 3 chr5 197571431 197571651 -2058499 + AluJb SINE Alu 2 291 -21 27 49 0 0 chr5 197571663 197571704 -2058446 + AT_rich Low_complexity Low_complexity 1 41 0 400 256 0 0 chr5 197571706 197571784 -2058366 + MER2 DNA MER2_type 268 345 0 367 258 43 11 chr5 197571830 197571923 -2058227 + L1MC4 LINE L1 6608 6703 -1339 329 250 0 0 chr5 197571881 197571945 -2058205 - L1MC4 LINE L1 -1339 6703 6640 * 685 115 0 44 chr5 197571948 197572061 -2058089 - FLAM_C SINE Alu -7 136 29 438 288 46 56 chr5 197572068 197572481 -2057669 + L1M4 LINE L1 3829 4237 -1909 2119 131 3 13 chr5 197572490 197572802 -2057348 + AluSx SINE Alu 1 309 -3 2024 114 36 11 chr5 197572809 197573090 -2057060 + AluSx SINE Alu 1 288 -24 1188 126 68 14 chr5 197573108 197573330 -2056820 + L1MB1 LINE L1 5935 6168 0 1848 163 20 7 chr5 197573419 197573725 -2056425 + AluJb SINE Alu 1 310 -2 183 313 60 15 chr5 197574661 197574728 -2055422 + L2 LINE L2 2562 2631 -683 1209 105 0 0 chr5 197574728 197574881 -2055269 - AluSq SINE Alu -160 153 1 2529 62 0 13 chr5 197576298 197576602 -2053548 - AluY SINE Alu -9 302 3 230 262 28 19 chr5 197576631 197576738 -2053412 + L1MC4 LINE L1 7724 7831 -211 2536 123 65 97 chr5 197576745 197577005 -2053145 + L1MA9 LINE L1 5535 5802 -510 526 204 56 0 chr5 197577005 197577113 -2053037 + FLAM_A SINE Alu 3 116 -17 2536 123 65 97 chr5 197577113 197577162 -2052988 + L1MA9 LINE L1 5802 5851 -461 1804 161 34 0 chr5 197577162 197577454 -2052696 + AluJb SINE Alu 6 307 -5 2536 123 65 97 chr5 197577454 197577759 -2052391 + L1MA9 LINE L1 5851 6130 -182 2277 125 0 0 chr5 197577759 197578062 -2052088 + AluSx SINE Alu 1 303 -9 2351 110 0 0 chr5 197578067 197578375 -2051775 + AluSx SINE Alu 1 308 -4 242 146 0 21 chr5 197578381 197578429 -2051721 + L1MA8 LINE L1 6115 6161 -130 2283 63 0 0 chr5 197578532 197578801 -2051349 - AluSx SINE Alu -43 269 1 351 258 111 41 chr5 197578818 197579158 -2050992 - L1 LINE L1 -2373 3773 3400 3761 117 70 81 chr5 197579188 197579964 -2050186 - LTR1 LTR ERV1 0 785 19 828 180 12 0 chr5 197580079 197580246 -2049904 - L1MB7 LINE L1 -11 6173 6005 2322 84 0 7 chr5 197580271 197580567 -2049583 - AluSc SINE Alu -15 294 1 1476 168 0 96 chr5 197580644 197580978 -2049172 + AluJo SINE Alu 1 302 0 353 212 71 53 chr5 197581005 197581231 -2048919 - L1MC4a LINE L1 -1736 6072 5843 1634 244 48 21 chr5 197581246 197581424 -2048726 - L1MC4a LINE L1 -2025 5783 5611 2608 62 0 0 chr5 197581424 197581732 -2048418 - AluY SINE Alu -3 308 1 1634 244 48 21 chr5 197581732 197582032 -2048118 - L1MC4a LINE L1 -2197 5611 5292 1370 231 127 17 chr5 197582051 197582514 -2047636 - MLT1H1 LTR MaLR -8 547 34 1655 152 4 30 chr5 197583472 197583607 -2046543 - AluJo SINE Alu -46 266 140 2284 94 0 7 chr5 197583607 197583904 -2046246 - AluSg SINE Alu -15 295 1 1655 152 4 30 chr5 197583904 197584037 -2046113 - AluJo SINE Alu -172 140 5 699 187 19 13 chr5 197584587 197584742 -2045408 - L1MD3 LINE L1 -8 7987 7832 2271 106 0 3 chr5 197584752 197585055 -2045095 - AluSx SINE Alu -10 302 1 561 249 65 24 chr5 197585060 197585229 -2044921 - L1MD2 LINE L1 -232 6127 5952 978 235 48 30 chr5 197585230 197585566 -2044584 + MLT1C LTR MaLR 4 345 -122 348 286 62 0 chr5 197585654 197585766 -2044384 - L2 LINE L2 -7 3306 3188 515 211 8 16 chr5 197585770 197585898 -2044252 - L1MDa LINE L1 -5066 1474 1348 186 288 75 0 chr5 197587000 197587080 -2043070 + L2 LINE L2 3138 3223 -49 461 277 44 120 chr5 197588388 197588771 -2041379 + MLT1K LTR MaLR 170 523 -65 2216 109 0 16 chr5 197591272 197591404 -2038746 + AluSx SINE Alu 6 139 -173 2279 89 0 0 chr5 197591404 197591686 -2038464 + AluY SINE Alu 17 298 -13 2216 109 0 16 chr5 197591686 197591856 -2038294 + AluSx SINE Alu 139 303 -9 2315 103 3 3 chr5 197593026 197593326 -2036824 + AluSx SINE Alu 1 300 -12 441 0 0 0 chr5 197593326 197593375 -2036775 + (TA)n Simple_repeat Simple_repeat 2 50 0 320 303 0 25 chr5 197593867 197593989 -2036161 - L1ME4a LINE L1 -194 5927 5809 347 353 83 21 chr5 197593996 197594370 -2035780 - L1ME4a LINE L1 -346 5775 5379 1872 175 27 47 chr5 197596768 197596835 -2033315 + MER57A LTR ERV1 4 71 -332 2153 114 0 46 chr5 197596835 197596981 -2033169 + AluSq SINE Alu 1 127 -186 2487 68 0 0 chr5 197596981 197597277 -2032873 + AluY SINE Alu 1 296 -15 2153 114 0 46 chr5 197597277 197597437 -2032713 + AluSq SINE Alu 127 293 -20 1872 175 27 47 chr5 197597437 197597775 -2032375 + MER57A LTR ERV1 71 401 -2 458 310 155 13 chr5 197598104 197598980 -2031170 + L1MC4a LINE L1 4669 5664 -748 324 270 88 0 chr5 197599087 197599224 -2030926 + LTR33 LTR ERVL 11 159 -362 341 253 21 11 chr5 197599324 197599419 -2030731 + LTR33 LTR ERVL 425 520 -1 293 288 141 18 chr5 197599429 197599592 -2030558 + L1MC4a LINE L1 5811 5993 -1815 1487 211 40 3 chr5 197599808 197600130 -2030020 + MLT1A1 LTR MaLR 1 334 -31 2645 48 0 6 chr5 197601071 197601384 -2028766 + AluY SINE Alu 1 311 0 1821 168 41 0 chr5 197603874 197604237 -2025913 - MLT1B LTR MaLR -12 378 1 788 237 87 76 chr5 197604306 197604686 -2025464 - MLT1J LTR MaLR -59 452 69 2526 78 0 0 chr5 197604827 197605134 -2025016 - AluY SINE Alu -2 309 3 443 306 53 49 chr5 197605135 197605586 -2024564 - L1MC/D LINE L1 -743 5403 4981 346 202 135 0 chr5 197605935 197606039 -2024111 + LTR33A LTR ERVL 406 523 0 602 313 28 75 chr5 197606456 197606519 -2023631 - L1MC/D LINE L1 -1487 4659 4595 2298 84 10 3 chr5 197606519 197606815 -2023335 - AluY SINE Alu -13 298 1 602 313 28 75 chr5 197606815 197606909 -2023241 - L1MC/D LINE L1 -1551 4595 4498 2479 70 3 7 chr5 197606909 197607210 -2022940 - AluSg1 SINE Alu -9 300 1 602 313 28 75 chr5 197607210 197607450 -2022700 - L1MC/D LINE L1 -1648 4498 4280 259 295 0 0 chr5 197607604 197607682 -2022468 - L1MC/D LINE L1 -2098 4048 3971 2624 55 0 3 chr5 197607684 197607994 -2022156 - AluY SINE Alu -2 309 1 1937 248 73 16 chr5 197608192 197608737 -2021413 + L1MB7 LINE L1 5592 6167 -17 616 224 0 0 chr5 197609148 197609264 -2020886 - MSTC LTR MaLR -310 118 3 382 362 12 6 chr5 197609951 197610114 -2020036 + MIR SINE MIR 63 226 -36 1886 165 117 3 chr5 197613219 197613595 -2016555 - MSTA LTR MaLR -9 419 1 867 201 8 122 chr5 197614058 197614208 -2015942 + AluJo SINE Alu 1 112 -200 2334 80 0 0 chr5 197614208 197614519 -2015631 + AluY SINE Alu 1 311 0 867 201 8 122 chr5 197614519 197614622 -2015528 + AluJo SINE Alu 112 225 -87 2306 79 0 3 chr5 197614919 197615223 -2014927 - AluY SINE Alu -8 303 1 284 198 0 12 chr5 197615328 197615409 -2014741 + (TGGA)n Simple_repeat Simple_repeat 3 82 0 367 238 7 7 chr5 197615439 197615586 -2014564 + (TGGA)n Simple_repeat Simple_repeat 3 149 0 506 149 0 9 chr5 197615673 197615780 -2014370 + (TGGA)n Simple_repeat Simple_repeat 4 109 0 349 231 11 19 chr5 197615839 197616109 -2014041 + (TGGA)n Simple_repeat Simple_repeat 1 267 0 180 254 0 0 chr5 197616163 197616222 -2013928 + (TGGA)n Simple_repeat Simple_repeat 4 62 0 351 297 11 22 chr5 197616574 197616665 -2013485 - L1MC4 LINE L1 -1339 6703 6614 2110 125 0 0 chr5 197616666 197616963 -2013187 - AluSx SINE Alu -15 297 1 1209 199 7 105 chr5 197616987 197617332 -2012818 - Charlie1a DNA MER1_type -1413 1348 1055 2483 61 0 6 chr5 197617332 197617645 -2012505 + AluY SINE Alu 1 311 0 1209 199 7 105 chr5 197617645 197617747 -2012403 - Charlie1a DNA MER1_type -1706 1055 945 431 176 44 0 chr5 197617749 197617840 -2012310 - MER96 DNA MER1_type? -2 173 79 461 200 19 0 chr5 197617873 197617978 -2012172 - Charlie1a DNA MER1_type -508 947 841 1776 206 5 24 chr5 197617995 197618369 -2011781 - LTR40c LTR ERVL -2 463 97 1888 117 29 0 chr5 197618379 197618677 -2011473 + AluSx SINE Alu 1 306 0 1058 155 0 0 chr5 197618677 197618845 -2011305 + AluY SINE Alu 134 301 -10 405 192 14 0 chr5 197618857 197618930 -2011220 - LTR40c LTR ERVL -379 86 13 3127 206 35 75 chr5 197618950 197619551 -2010599 - Charlie1a DNA MER1_type -1925 836 278 1284 243 13 0 chr5 197619551 197619851 -2010299 + AluJo SINE Alu 2 305 -7 3127 206 35 75 chr5 197619851 197620104 -2010046 - Charlie1a DNA MER1_type -2483 278 16 797 261 48 42 chr5 197620259 197620495 -2009655 - MER102b DNA MER1_type -1096 332 92 2362 66 0 7 chr5 197620495 197620797 -2009353 - AluY SINE Alu -11 300 1 797 261 48 42 chr5 197620797 197620890 -2009260 - MER102b DNA MER1_type -1336 92 1 325 303 18 28 chr5 197621043 197621152 -2008998 - MIR SINE MIR -71 191 84 502 294 61 27 chr5 197621153 197621383 -2008767 + L2 LINE L2 2830 3072 -241 315 0 0 0 chr5 197621383 197621418 -2008732 + (CA)n Simple_repeat Simple_repeat 1 35 0 502 294 61 27 chr5 197621418 197621449 -2008701 + L2 LINE L2 3072 3100 -213 1377 311 82 23 chr5 197621929 197622302 -2007848 + L1ME2 LINE L1 5286 5636 -528 2720 141 76 0 chr5 197622302 197622764 -2007386 - LOR1a LTR ERV1 0 497 1 1377 311 82 23 chr5 197622764 197623085 -2007065 + L1ME2 LINE L1 5636 6021 -143 1339 254 56 23 chr5 197623087 197623594 -2006556 - MER74B LTR ERVL 0 622 59 180 204 182 0 chr5 197626550 197626594 -2003556 + L2 LINE L2 3262 3313 0 355 220 50 10 chr5 197626634 197626734 -2003416 - MIR SINE MIR 0 262 159 452 275 120 0 chr5 197626734 197626876 -2003274 + MER45 DNA AcHobo 1 159 -794 2076 101 7 20 chr5 197627274 197627572 -2002578 + AluSx SINE Alu 1 294 -18 2140 119 3 0 chr5 197628027 197628330 -2001820 + AluSp SINE Alu 1 304 -9 2246 97 3 0 chr5 197628458 197628758 -2001392 + AluSx SINE Alu 1 301 -11 551 172 0 11 chr5 197628965 197629058 -2001092 + AluJ/FLAM SINE Alu 2 93 -219 205 214 48 4 chr5 197629128 197629193 -2000957 - MIR SINE MIR -85 123 52 1280 102 11 5 chr5 197629394 197629581 -2000569 - AluSp SINE Alu -5 308 121 911 73 0 119 chr5 197629618 197629769 -2000381 - AluSq/x SINE Alu -179 133 1 1604 115 16 12 chr5 197629934 197630178 -1999972 - AluSx SINE Alu -67 245 1 680 189 34 11 chr5 197630180 197630355 -1999795 - L1MDa LINE L1 -5254 1286 1108 971 189 11 11 chr5 197630355 197630565 -1999585 + AluJb SINE Alu 98 307 0 976 255 33 60 chr5 197630565 197630725 -1999425 - LTR37A LTR ERV1 -54 372 209 1975 186 155 25 chr5 197630725 197630879 -1999271 - MLT1D LTR MaLR 0 505 372 2373 66 0 10 chr5 197630879 197631184 -1998966 + AluY SINE Alu 1 302 -9 1975 186 155 25 chr5 197631184 197631475 -1998675 - MLT1D LTR MaLR -133 372 2 976 255 33 60 chr5 197631475 197631679 -1998471 - LTR37A LTR ERV1 -217 209 18 317 340 49 46 chr5 197631746 197632031 -1998119 - HAL1 LINE L1 -1182 1325 1040 291 54 0 0 chr5 197632243 197632280 -1997870 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 785 126 36 0 chr5 197632280 197632391 -1997759 - FLAM_C SINE Alu -27 116 2 244 279 19 39 chr5 197632403 197632507 -1997643 - MER77 LTR ERV1 -424 181 80 388 158 0 0 chr5 197633884 197633941 -1996209 + FRAM SINE Alu 75 131 -35 208 143 0 0 chr5 197633955 197633990 -1996160 + (T)n Simple_repeat Simple_repeat 1 35 0 2316 74 0 3 chr5 197634001 197634300 -1995850 + AluY SINE Alu 1 298 -13 1236 167 25 0 chr5 197634320 197634524 -1995626 - AluJb SINE Alu -103 209 1 338 164 0 0 chr5 197634526 197634581 -1995569 + MLT2C1 LTR ERVL 4 58 -339 1142 259 24 12 chr5 197634581 197634917 -1995233 - MER93a LTR ERV1 0 402 63 1075 210 33 57 chr5 197635016 197635374 -1994776 + MLT2C1 LTR ERVL 60 414 0 215 349 81 0 chr5 197635460 197635632 -1994518 + L2 LINE L2 2398 2583 -731 2357 74 0 0 chr5 197636181 197636492 -1993658 - AluY SINE Alu 0 311 1 2189 75 4 0 chr5 197638453 197638731 -1991419 + AluSx SINE Alu 1 279 -33 2312 66 7 0 chr5 197638745 197639033 -1991117 + AluY SINE Alu 1 290 -21 260 286 161 9 chr5 197639258 197639370 -1990780 + L2 LINE L2 3182 3310 -3 2221 75 0 14 chr5 197640220 197640513 -1989637 + AluY SINE Alu 1 289 -22 1686 126 28 0 chr5 197640528 197640783 -1989367 + AluSx SINE Alu 41 302 -10 614 344 15 7 chr5 197640797 197641067 -1989083 + HAL1 LINE L1 1387 1658 -849 2337 68 0 0 chr5 197641423 197641715 -1988435 - AluY SINE Alu -8 303 12 460 173 53 98 chr5 197641955 197642107 -1988043 + MLT1I LTR MaLR 257 548 -1 656 223 8 0 chr5 197642205 197642335 -1987815 + FLAM_C SINE Alu 6 136 -7 545 245 70 69 chr5 197642336 197642400 -1987750 + L1ME2 LINE L1 5864 5926 -236 2076 110 7 10 chr5 197642400 197642700 -1987450 + AluSq SINE Alu 1 299 -14 545 245 70 69 chr5 197642700 197642909 -1987241 + L1ME2 LINE L1 5926 6152 -10 555 56 0 0 chr5 197642909 197642980 -1987170 - U4 snRNA snRNA -74 71 1 1171 181 96 107 chr5 197644428 197644581 -1985569 - Charlie1b DNA MER1_type -2239 522 369 330 128 103 0 chr5 197644581 197644659 -1985491 + L1MA7 LINE L1 6204 6289 -2 1171 181 96 107 chr5 197644659 197644964 -1985186 - Charlie1b DNA MER1_type -2392 369 69 501 82 0 184 chr5 197645112 197645145 -1985005 - MADE1 DNA Mariner 0 80 43 2208 96 0 0 chr5 197645145 197645436 -1984714 + AluSx SINE Alu 3 293 -19 501 82 0 184 chr5 197645436 197645500 -1984650 - MADE1 DNA Mariner -37 43 1 371 269 41 18 chr5 197645553 197645724 -1984426 + (TG)n Simple_repeat Simple_repeat 2 176 0 345 208 44 60 chr5 197645813 197645996 -1984154 + (TG)n Simple_repeat Simple_repeat 1 180 0 202 295 184 53 chr5 197646099 197646289 -1983861 - MIR SINE MIR -10 252 38 197 309 18 0 chr5 197646617 197646672 -1983478 - L2 LINE L2 -7 3265 3210 586 231 44 12 chr5 197647931 197648091 -1982059 - MER5A DNA MER1_type -24 165 1 23 0 0 0 chr5 197648282 197648305 -1981845 + AT_rich Low_complexity Low_complexity 1 23 0 1426 214 0 0 chr5 197648305 197648585 -1981565 - AluJo SINE Alu 0 312 33 1938 152 0 0 chr5 197649691 197649993 -1980157 + AluSx SINE Alu 1 302 -10 2320 78 10 0 chr5 197650252 197650559 -1979591 + AluY SINE Alu 1 310 -1 2145 104 7 0 chr5 197650607 197650906 -1979244 + AluSg SINE Alu 1 301 -9 1275 264 56 23 chr5 197651029 197651536 -1978614 + MER74B LTR ERVL 59 622 0 1458 307 83 20 chr5 197651538 197651859 -1978291 - L1ME2 LINE L1 -143 6021 5721 2745 138 76 0 chr5 197651859 197652321 -1977829 + LOR1a LTR ERV1 1 497 0 1458 307 83 20 chr5 197652321 197652689 -1977461 - L1ME2 LINE L1 -443 5721 5289 485 298 61 27 chr5 197653174 197653205 -1976945 - L2 LINE L2 -213 3100 3072 279 0 0 0 chr5 197653205 197653236 -1976914 + (TG)n Simple_repeat Simple_repeat 1 31 0 485 298 61 27 chr5 197653236 197653466 -1976684 - L2 LINE L2 -241 3072 2830 349 284 18 28 chr5 197653467 197653576 -1976574 + MIR SINE MIR 84 191 -71 797 261 48 42 chr5 197653729 197653822 -1976328 + MER102b DNA MER1_type 1 92 -1336 2346 63 0 3 chr5 197653822 197654123 -1976027 + AluY SINE Alu 1 300 -11 797 261 48 42 chr5 197654123 197654359 -1975791 + MER102b DNA MER1_type 92 332 -9 636 262 98 27 chr5 197654514 197654739 -1975411 + Charlie1a DNA MER1_type 16 256 -1199 2065 80 0 0 chr5 197654745 197655009 -1975141 + AluSx SINE Alu 38 301 -11 987 169 8 72 chr5 197655034 197655141 -1975009 + Charlie1a DNA MER1_type 733 818 -1943 2180 216 8 38 chr5 197655141 197655618 -1974532 + LTR40c LTR ERVL 2 464 -1 987 169 8 72 chr5 197655618 197655746 -1974404 + Charlie1a DNA MER1_type 818 953 -502 282 231 55 11 chr5 197655773 197655864 -1974286 + MER96 DNA MER1_type? 79 173 -2 2063 201 13 60 chr5 197655866 197656402 -1973748 + Charlie1a DNA MER1_type 945 1455 0 913 257 90 24 chr5 197656402 197656870 -1973280 - MER115 DNA AcHobo -65 628 44 310 216 113 10 chr5 197657285 197657343 -1972807 - L1MC4 LINE L1 -1314 7008 6957 2106 102 0 10 chr5 197657343 197657637 -1972513 + AluSg1 SINE Alu 1 291 -18 310 216 113 10 chr5 197657637 197657675 -1972475 - L1MC4 LINE L1 -1365 6957 1995 247 301 0 44 chr5 197658075 197658188 -1971962 + G-rich Low_complexity Low_complexity 6 113 0 2211 87 0 55 chr5 197658286 197658433 -1971717 + AluSx SINE Alu 1 124 -188 2442 69 0 10 chr5 197658433 197658736 -1971414 + AluY SINE Alu 1 300 -11 2211 87 0 55 chr5 197658736 197658899 -1971251 + AluSx SINE Alu 124 294 -18 205 371 6 28 chr5 197660431 197660609 -1969541 + L2 LINE L2 2631 2804 -510 538 292 14 27 chr5 197661527 197661746 -1968404 + MLT1K LTR MaLR 350 565 -23 2259 122 0 3 chr5 197663221 197663533 -1966617 - AluSx SINE Alu -1 311 1 203 290 84 46 chr5 197663740 197663871 -1966279 + MIR SINE MIR 16 151 -111 310 307 61 0 chr5 197664226 197664340 -1965810 - L1 LINE L1 -1142 5004 4884 375 364 66 20 chr5 197664908 197665328 -1964822 - L1ME LINE L1 -540 5630 5162 2526 60 0 3 chr5 197665328 197665629 -1964521 - AluY SINE Alu -11 300 1 375 364 66 20 chr5 197665629 197665948 -1964202 - L1ME LINE L1 -1008 5162 4859 314 305 81 77 chr5 197666090 197666110 -1964040 - L1ME LINE L1 -1453 4693 4675 1549 121 30 181 chr5 197666110 197666178 -1963972 - MLT1A1 LTR MaLR 0 365 288 1802 158 9 58 chr5 197666178 197666506 -1963644 - AluJb SINE Alu 0 312 1 1549 121 30 181 chr5 197666506 197666575 -1963575 - MLT1A1 LTR MaLR -77 288 210 219 88 0 0 chr5 197666575 197666609 -1963541 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2181 105 4 0 chr5 197666611 197666888 -1963262 - AluSx SINE Alu -34 278 1 1549 121 30 181 chr5 197666888 197667176 -1962974 - MLT1A1 LTR MaLR -156 209 1 314 305 81 77 chr5 197667176 197667348 -1962802 - L1ME LINE L1 -1471 4675 4505 2486 63 3 0 chr5 197667348 197667649 -1962501 - AluY SINE Alu -9 302 1 314 305 81 77 chr5 197667649 197667898 -1962252 - L1ME LINE L1 -1641 4505 4249 21 0 0 0 chr5 197668673 197668694 -1961456 + AT_rich Low_complexity Low_complexity 1 21 0 1876 97 0 4 chr5 197668694 197668931 -1961219 + AluSq SINE Alu 1 236 -77 2360 83 0 10 chr5 197670718 197671019 -1959131 + AluY SINE Alu 1 298 -13 240 35 0 0 chr5 197671045 197671074 -1959076 + (CA)n Simple_repeat Simple_repeat 1 29 0 245 293 92 48 chr5 197671083 197671356 -1958794 + L1ME2 LINE L1 36 320 -6076 871 153 41 29 chr5 197671688 197671858 -1958292 + MER20 DNA MER1_type 45 216 -3 340 259 12 0 chr5 197671898 197671983 -1958167 + MLT1F1 LTR MaLR 3 88 -454 * 1199 243 33 3 chr5 197671972 197672276 -1957874 + MLT1F1 LTR MaLR 255 567 0 3727 258 53 34 chr5 197672283 197673526 -1956624 + L1ME2 LINE L1 660 1878 -4337 189 0 0 0 chr5 197673526 197673547 -1956603 + (TA)n Simple_repeat Simple_repeat 2 22 0 3727 258 53 34 chr5 197673547 197674994 -1955156 + L1ME2 LINE L1 1878 3352 -2863 362 117 0 0 chr5 197674994 197675054 -1955096 - L1MA8 LINE L1 -13 6278 6219 3727 258 53 34 chr5 197675054 197675242 -1954908 + L1ME2 LINE L1 3352 3535 -2680 560 270 218 17 chr5 197675254 197675543 -1954607 - MLT1H1 LTR MaLR -12 543 197 906 216 45 8 chr5 197675550 197675795 -1954355 + L1ME2 LINE L1 4708 4961 -1254 976 229 82 66 chr5 197675796 197676101 -1954049 - MLT1E1 LTR MaLR 0 654 345 358 176 0 0 chr5 197676136 197676204 -1953946 - MLT1E1 LTR MaLR -418 236 169 729 206 65 30 chr5 197676208 197676407 -1953743 - MLT1D LTR MaLR -187 318 113 2185 161 88 17 chr5 197676418 197676840 -1953310 + MER66A LTR ERV1 27 478 0 374 184 20 49 chr5 197676840 197676960 -1953190 - MLT1D LTR MaLR -455 50 4 406 232 93 99 chr5 197676989 197677100 -1953050 + L1ME2 LINE L1 4953 5064 -1151 2223 108 0 26 chr5 197677100 197677406 -1952744 + AluY SINE Alu 1 298 -13 406 232 93 99 chr5 197677406 197677445 -1952705 + L1ME2 LINE L1 5064 5102 -1113 3590 157 38 62 chr5 197677463 197678298 -1951852 + L1MB7 LINE L1 5354 6168 -16 753 165 161 18 chr5 197678313 197678531 -1951619 + Cheshire DNA MER1_type 2012 2260 -160 2877 227 53 14 chr5 197678548 197679575 -1950575 + L1ME2 LINE L1 5085 6160 -73 477 0 0 0 chr5 197679579 197679632 -1950518 + (TA)n Simple_repeat Simple_repeat 2 54 0 2549 81 3 3 chr5 197679632 197679978 -1950172 + THE1A LTR MaLR 7 352 -3 297 0 0 0 chr5 197679992 197680025 -1950125 + (TG)n Simple_repeat Simple_repeat 2 34 0 312 213 0 13 chr5 197680025 197680100 -1950050 + L1ME3 LINE L1 6082 6155 -7 2248 91 0 42 chr5 197680125 197680433 -1949717 + AluY SINE Alu 1 295 -16 2295 86 31 0 chr5 197680433 197680724 -1949426 + AluY SINE Alu 1 300 -11 208 164 49 0 chr5 197680921 197680982 -1949168 + GA-rich Low_complexity Low_complexity 2 65 0 2593 107 13 11 chr5 197681207 197681581 -1948569 + THE1C LTR MaLR 1 375 0 10784 113 13 31 chr5 197681581 197683190 -1946960 + THE1C-int LTR MaLR 1 1580 0 2399 115 24 19 chr5 197683190 197683563 -1946587 + THE1C LTR MaLR 1 375 0 641 241 105 51 chr5 197683588 197683941 -1946209 + MLT1J2 LTR MaLR 45 416 -34 1694 246 92 37 chr5 197684073 197684175 -1945975 + L1MD2 LINE L1 5285 5380 -979 2418 62 31 0 chr5 197684175 197684465 -1945685 + AluY SINE Alu 1 299 -12 1694 246 92 37 chr5 197684465 197685338 -1944812 + L1MD2 LINE L1 5380 6347 -12 351 267 105 33 chr5 197685641 197685882 -1944268 - L2 LINE L2 -24 3248 2454 288 270 108 27 chr5 197689888 197689999 -1940151 - MIR SINE MIR -35 227 108 183 286 76 38 chr5 197690834 197690939 -1939211 - L2 LINE L2 -220 3052 2944 414 0 0 0 chr5 197691442 197691488 -1938662 + (CA)n Simple_repeat Simple_repeat 2 47 0 2717 37 0 0 chr5 197691579 197691877 -1938273 + AluY SINE Alu 1 298 -13 258 241 57 57 chr5 197693195 197693336 -1936814 + MIR3 SINE MIR 11 151 -57 214 372 0 0 chr5 197693896 197694025 -1936125 + C-rich Low_complexity Low_complexity 1 129 0 1046 98 0 0 chr5 197694138 197694270 -1935880 - AluY SINE Alu -179 132 1 2373 105 0 6 chr5 197694479 197694794 -1935356 + AluSq SINE Alu 1 313 0 2107 107 3 7 chr5 197694862 197695161 -1934989 + AluY SINE Alu 1 298 -13 2573 67 0 10 chr5 197695555 197695869 -1934281 + AluY SINE Alu 1 311 0 189 0 0 0 chr5 197696792 197696813 -1933337 + (ATG)n Simple_repeat Simple_repeat 2 22 0 756 147 5 27 chr5 197696829 197697013 -1933137 + CT-rich Low_complexity Low_complexity 1 180 0 1895 137 10 20 chr5 197697036 197697191 -1932959 - AluJb SINE Alu -23 289 137 2304 114 0 7 chr5 197697191 197697497 -1932653 - AluSq SINE Alu -9 304 1 1895 137 10 20 chr5 197697497 197697633 -1932517 - AluJb SINE Alu -175 137 1 1530 202 64 23 chr5 197697633 197698004 -1932146 - L1M3 LINE L1 -441 5742 5388 2530 72 0 0 chr5 197698004 197698310 -1931840 - AluY SINE Alu -5 306 1 2490 88 3 0 chr5 197698311 197698617 -1931533 - AluSx SINE Alu -5 307 1 1530 202 64 23 chr5 197698617 197698666 -1931484 - L1M3 LINE L1 -794 5389 5281 2122 249 110 19 chr5 197698666 197699402 -1930748 - L1ME3A LINE L1 -8 6162 5360 217 128 43 0 chr5 197699418 197699465 -1930685 + CT-rich Low_complexity Low_complexity 1 49 0 394 315 136 48 chr5 197699476 197699519 -1930631 - L1ME3A LINE L1 -804 5342 5304 918 77 7 49 chr5 197699519 197699662 -1930488 - L1PA8 LINE L1 0 6172 6036 394 315 136 48 chr5 197699662 197699739 -1930411 - L1ME3A LINE L1 -842 5304 5235 1908 139 10 0 chr5 197699739 197700027 -1930123 - AluJb SINE Alu -21 291 1 394 315 136 48 chr5 197700027 197700087 -1930063 - L1ME3A LINE L1 -911 5235 5182 8532 55 1 0 chr5 197700087 197701055 -1929095 - LTR5 LTR ERVK 0 969 1 394 315 136 48 chr5 197701055 197701123 -1929027 - L1ME3A LINE L1 -964 5182 5070 266 270 92 70 chr5 197701944 197702129 -1928021 + L1ME1 LINE L1 5920 6108 -58 2369 78 3 3 chr5 197702133 197702428 -1927722 - AluSq SINE Alu -18 295 1 720 189 8 8 chr5 197703623 197703755 -1926395 + FLAM_C SINE Alu 2 133 -10 234 0 0 0 chr5 197703846 197703872 -1926278 + (T)n Simple_repeat Simple_repeat 1 26 0 403 295 30 4 chr5 197705088 197705250 -1924900 + MIR SINE MIR 2 167 -62 1845 108 0 0 chr5 197705345 197705586 -1924564 - AluSq SINE Alu -72 241 1 546 244 179 0 chr5 197706048 197706294 -1923856 + L1M4b LINE L1 1244 1533 -5326 1280 92 0 3 chr5 197706296 197706527 -1923623 + AluSp SINE Alu 2 305 -8 824 246 86 101 chr5 197706528 197706845 -1923305 + L1M4b LINE L1 1798 2118 -4841 2051 121 3 27 chr5 197706845 197706972 -1923178 + AluSx SINE Alu 10 138 -174 2395 98 0 0 chr5 197706972 197707279 -1922871 + AluY SINE Alu 1 307 -4 2051 121 3 27 chr5 197707279 197707448 -1922702 + AluSx SINE Alu 138 299 -13 824 246 86 101 chr5 197707448 197707469 -1922681 + L1M4b LINE L1 2118 2138 -4821 1379 29 12 0 chr5 197707469 197707640 -1922510 + (GAAA)n Simple_repeat Simple_repeat 4 176 0 824 246 86 101 chr5 197707640 197707844 -1922306 + L1M4b LINE L1 2138 2333 -4626 282 116 0 0 chr5 197707887 197707930 -1922220 + (TG)n Simple_repeat Simple_repeat 1 43 0 352 289 48 42 chr5 197908492 197908772 -1721378 + MLT1K LTR MaLR 254 561 -27 1154 174 21 13 chr5 197909895 197910131 -1720019 - Tigger2 DNA MER2_type -10 2708 2471 1835 197 13 28 chr5 197910209 197910407 -1719743 - Tigger2 DNA MER2_type -1984 734 543 1726 121 54 67 chr5 197910407 197910705 -1719445 - AluSg SINE Alu -16 294 1 1835 197 13 28 chr5 197910705 197910897 -1719253 - Tigger2 DNA MER2_type -2175 543 350 522 261 23 15 chr5 197912576 197912706 -1717444 - MIR SINE MIR -74 188 58 229 358 122 8 chr5 197913023 197913146 -1717004 - L2 LINE L2 -15 3298 3162 223 371 113 0 chr5 197913614 197913711 -1716439 + L2 LINE L2 3123 3230 -42 238 254 29 72 chr5 197913744 197913882 -1716268 - L1ME LINE L1 -366 5755 5624 1570 143 0 34 chr5 197913882 197914148 -1716002 - AluSx SINE Alu -10 302 46 1851 152 3 0 chr5 197914192 197914495 -1715655 - AluY SINE Alu -7 304 1 39 59 0 12 chr5 197914666 197914716 -1715434 + AT_rich Low_complexity Low_complexity 1 50 -34 2329 74 3 6 chr5 197914724 197915035 -1715115 - AluY SINE Alu -1 310 1 2302 75 0 34 chr5 197915035 197915208 -1714942 - AluSx SINE Alu -9 303 126 2203 109 0 10 chr5 197915208 197915519 -1714631 - AluSg SINE Alu -2 308 1 2346 84 0 13 chr5 197915520 197915831 -1714319 - AluSx SINE Alu -5 307 1 2302 75 0 34 chr5 197915831 197915967 -1714183 - AluSx SINE Alu -185 127 1 39 59 0 12 chr5 197915967 197916001 -1714149 + AT_rich Low_complexity Low_complexity 50 84 0 4579 48 5 4 chr5 197916001 197916561 -1713589 - L1PA5 LINE L1 -1 6153 5593 2144 115 7 0 chr5 197917023 197917319 -1712831 - AluSx SINE Alu -14 298 1 1157 142 51 55 chr5 197917410 197917633 -1712517 - L1MB8 LINE L1 -9 6169 5946 2406 55 3 0 chr5 197917633 197917925 -1712225 + AluY SINE Alu 1 293 -18 1157 142 51 55 chr5 197917925 197917954 -1712196 - L1MB8 LINE L1 -232 5946 5918 1922 158 74 7 chr5 197917964 197918381 -1711769 - L1MB8 LINE L1 -323 5855 5411 2143 117 0 0 chr5 197919585 197919883 -1710267 - AluSg SINE Alu -12 298 1 298 333 73 0 chr5 197920037 197920133 -1710017 + L2 LINE L2 3201 3303 -10 2234 72 20 3 chr5 197920357 197920649 -1709501 - AluSc SINE Alu -12 297 1 201 344 94 36 chr5 197920701 197920925 -1709225 + L2 LINE L2 2825 3061 -211 192 329 13 51 chr5 197921044 197921123 -1709027 + L2 LINE L2 3192 3267 -5 338 307 74 37 chr5 197925749 197926019 -1704131 + L1ME4a LINE L1 5554 5833 -288 239 246 33 0 chr5 197926298 197926359 -1703791 - L2 LINE L2 -5 3267 3205 2277 96 0 0 chr5 197926498 197926799 -1703351 - AluSx SINE Alu -9 303 3 1578 172 51 4 chr5 197926808 197927081 -1703069 - AluJo SINE Alu -21 291 6 1490 137 8 4 chr5 197927086 197927349 -1702801 - Tigger2 DNA MER2_type -2454 264 1 710 298 32 11 chr5 197928368 197928647 -1701503 - LTR16A LTR ERVL -78 372 88 269 265 12 0 chr5 197929704 197929787 -1700363 + Charlie4 DNA MER1_type 1878 1961 0 924 175 48 57 chr5 197930223 197930451 -1699699 + AluJo SINE Alu 71 296 -16 579 218 40 0 chr5 197930700 197930824 -1699326 + FLAM_A SINE Alu 3 131 -2 366 217 11 11 chr5 197930838 197930930 -1699220 + MER34 LTR ERV1 451 542 0 451 273 123 30 chr5 197931128 197931428 -1698722 - MLT1I LTR MaLR -3 406 79 814 212 0 39 chr5 197931437 197931616 -1698534 + AluJo SINE Alu 123 294 -18 237 269 167 0 chr5 197931680 197931758 -1698392 - L2 LINE L2 -785 2529 2439 2218 122 0 0 chr5 197931818 197932121 -1698029 + AluSx SINE Alu 2 304 -8 189 0 0 0 chr5 197932860 197932881 -1697269 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 896 129 0 74 chr5 197932887 197933089 -1697061 - AluSq SINE Alu -53 260 74 1023 106 21 0 chr5 197933197 197933339 -1696811 + AluSq SINE Alu 122 266 -47 365 333 6 0 chr5 197933931 197934093 -1696057 - L1M4 LINE L1 -937 5209 5047 1082 100 0 0 chr5 197934110 197934260 -1695890 + AluSg/x SINE Alu 160 309 -3 716 95 17 9 chr5 197934261 197934377 -1695773 - MSTD LTR MaLR -269 127 11 451 168 131 0 chr5 197934380 197934517 -1695633 - L1MB5 LINE L1 -225 5949 5795 262 161 0 0 chr5 197934470 197934526 -1695624 + L1MC4 LINE L1 7987 8042 0 * 1525 90 0 5 chr5 197934544 197934745 -1695405 + AluSq SINE Alu 1 200 -113 679 128 10 0 chr5 197934792 197934894 -1695256 + AluSg/x SINE Alu 203 305 -7 2234 86 10 0 chr5 197935293 197935584 -1694566 + AluSq SINE Alu 1 294 -19 366 313 80 0 chr5 197935649 197935812 -1694338 - HERV16 LTR ERVL -2779 2217 2042 299 90 11 67 chr5 197935814 197935903 -1694247 + (TTC)n Simple_repeat Simple_repeat 1 84 0 927 61 84 8 chr5 197936030 197936161 -1693989 - AluY SINE Alu -170 141 1 2370 84 6 0 chr5 197936182 197936493 -1693657 - AluSp SINE Alu 0 313 1 265 220 155 30 chr5 197936537 197936658 -1693492 + L1MC4a LINE L1 7610 7759 -49 2016 120 47 3 chr5 197936658 197936957 -1693193 - AluSx SINE Alu 0 312 1 265 220 155 30 chr5 197936957 197937003 -1693147 + L1MC4a LINE L1 7759 7798 -10 1460 136 75 25 chr5 197937003 197937283 -1692867 + AluJo SINE Alu 1 294 -18 248 254 67 67 chr5 197938727 197938892 -1691258 - MLT1K LTR MaLR -419 169 5 24 32 0 0 chr5 197941574 197941605 -1688545 + GC_rich Low_complexity Low_complexity 1 31 0 231 300 41 91 chr5 197942630 197942833 -1687317 - L2 LINE L2 -284 2988 2798 22 0 0 0 chr5 197943395 197943417 -1686733 + GC_rich Low_complexity Low_complexity 1 22 0 267 185 222 0 chr5 197944326 197944407 -1685743 - MIR SINE MIR -70 192 94 249 119 0 0 chr5 197945677 197945719 -1684431 + (CAGGG)n Simple_repeat Simple_repeat 5 46 0 276 286 12 12 chr5 197950345 197950429 -1679721 + Charlie8 DNA MER1_type 89 172 -2245 641 150 40 0 chr5 197951419 197951519 -1678631 + AluJb SINE Alu 185 288 -24 1843 135 13 35 chr5 197951596 197951907 -1678243 + AluSx SINE Alu 1 304 -8 1769 160 28 0 chr5 197953136 197953424 -1676726 + AluJb SINE Alu 1 296 -16 853 195 0 0 chr5 197953433 197953582 -1676568 + FAM SINE Alu 1 149 -36 1643 154 10 24 chr5 197953584 197953877 -1676273 - AluJo SINE Alu -15 297 9 673 187 23 6 chr5 197963349 197963520 -1666630 - Charlie5 DNA MER1_type 0 2624 2451 1743 155 20 10 chr5 197963525 197963828 -1666322 + AluJb SINE Alu 1 306 -6 1139 88 7 0 chr5 197967895 197968043 -1662107 + AluSp SINE Alu 1 149 -164 2211 84 0 7 chr5 197969109 197969405 -1660745 + AluSc SINE Alu 1 294 -15 2076 101 0 19 chr5 197969509 197969816 -1660334 - AluSx SINE Alu -11 301 1 2189 109 3 0 chr5 197969850 197970153 -1659997 + AluSx SINE Alu 1 304 -8 1751 149 0 37 chr5 197970172 197970467 -1659683 + AluSx SINE Alu 10 293 -19 1052 173 27 5 chr5 197970946 197971131 -1659019 + MER5A DNA MER1_type 1 189 0 1510 203 17 0 chr5 197971169 197971459 -1658691 - AluJo SINE Alu -14 298 4 1762 172 7 0 chr5 197971477 197971773 -1658377 - AluJb SINE Alu -14 298 1 2013 112 3 37 chr5 197971803 197972125 -1658025 + AluSp SINE Alu 1 311 -2 315 0 0 0 chr5 197972556 197972591 -1657559 + (CA)n Simple_repeat Simple_repeat 1 35 0 2160 113 3 0 chr5 197972703 197973005 -1657145 + AluSx SINE Alu 1 303 -9 927 53 0 45 chr5 197973046 197973179 -1656971 + AluY SINE Alu 177 303 -8 2374 76 3 0 chr5 197973404 197973708 -1656442 - AluSp SINE Alu -8 305 1 2173 80 23 13 chr5 197973721 197974021 -1656129 - AluY SINE Alu -8 303 1 272 160 0 0 chr5 197974021 197974071 -1656079 - Charlie2 DNA MER1_type -60 2802 2753 24 32 0 0 chr5 197974137 197974168 -1655982 + AT_rich Low_complexity Low_complexity 1 31 0 858 220 88 36 chr5 197974196 197974544 -1655606 - Charlie2 DNA MER1_type -68 2794 2423 2032 117 0 10 chr5 197974544 197974842 -1655308 - AluSg SINE Alu -15 295 1 858 220 88 36 chr5 197974842 197974879 -1655271 - Charlie2 DNA MER1_type -439 2423 2389 1511 93 97 4 chr5 197974896 197975122 -1655028 - AluSx SINE Alu -15 297 51 419 237 78 73 chr5 197975236 197975259 -1654891 - Charlie2 DNA MER1_type -539 2323 2302 2340 60 0 13 chr5 197975259 197975561 -1654589 - AluY SINE Alu -13 298 1 419 237 78 73 chr5 197975561 197975769 -1654381 - Charlie2 DNA MER1_type -560 2302 2091 2395 55 0 46 chr5 197975790 197975935 -1654215 + AluSq SINE Alu 1 151 -162 2097 82 0 47 chr5 197975935 197976254 -1653896 + AluY SINE Alu 1 304 -7 2395 55 0 46 chr5 197976254 197976436 -1653714 + AluSq SINE Alu 151 313 0 983 101 90 58 chr5 197976443 197976631 -1653519 + THE1B LTR MaLR 171 364 0 1156 143 0 0 chr5 197976631 197976790 -1653360 + AluSg/x SINE Alu 136 297 -13 2532 51 0 3 chr5 197976790 197977102 -1653048 + AluY SINE Alu 1 311 0 1156 143 0 0 chr5 197977102 197977117 -1653033 + AluSg/x SINE Alu 296 310 0 305 312 28 37 chr5 197977250 197977359 -1652791 - L1 LINE L1 -827 5319 5212 1006 103 0 0 chr5 197977508 197977644 -1652506 + AluSq/x SINE Alu 1 136 -176 2319 84 0 13 chr5 197977644 197977954 -1652196 + AluSx SINE Alu 1 306 -6 2452 55 7 3 chr5 197977955 197978263 -1651887 + AluY SINE Alu 1 309 -2 1141 156 111 84 chr5 197978263 197978531 -1651619 + L1MB2 LINE L1 5823 6103 -68 1154 135 6 132 chr5 197978531 197978858 -1651292 - AluSx SINE Alu -16 286 1 1141 156 111 84 chr5 197978858 197978922 -1651228 + L1MB2 LINE L1 6103 6164 -7 1828 252 89 8 chr5 197979015 197979423 -1650727 + HAL1 LINE L1 1189 1670 -837 1891 130 0 14 chr5 197979423 197979610 -1650540 - AluSx SINE Alu 0 320 137 2150 96 7 0 chr5 197979610 197979902 -1650248 - AluSp SINE Alu -18 295 2 1891 130 0 14 chr5 197979902 197980038 -1650112 - AluSx SINE Alu -183 137 1 1828 252 89 8 chr5 197980038 197980267 -1649883 + HAL1 LINE L1 1670 1879 -628 371 225 7 106 chr5 197980835 197980941 -1649209 + L2 LINE L2 3186 3276 -37 1575 170 11 3 chr5 197980941 197981224 -1648926 - AluJb SINE Alu -11 301 17 371 225 7 106 chr5 197981224 197981259 -1648891 + L2 LINE L2 3276 3313 0 1595 95 107 0 chr5 197981463 197981725 -1648425 - AluSx SINE Alu -22 290 1 438 242 49 70 chr5 197981732 197981888 -1648262 + MER33 DNA MER1_type 1 151 -2434 2144 84 7 0 chr5 197981888 197982172 -1647978 + AluSg SINE Alu 10 295 -15 1825 157 28 0 chr5 197982182 197982469 -1647681 + AluJb SINE Alu 1 295 -17 438 242 49 70 chr5 197982469 197982498 -1647652 + MER33 DNA MER1_type 160 188 -2397 2351 85 0 0 chr5 197982498 197982803 -1647347 + AluSc SINE Alu 1 305 -4 438 242 49 70 chr5 197982803 197982848 -1647302 + MER33 DNA MER1_type 188 230 -94 271 198 210 13 chr5 197982837 197982994 -1647156 + Charlie5 DNA MER1_type 2389 2576 -36 * 291 200 200 0 chr5 197983338 197983408 -1646742 - MLT1K LTR MaLR -352 236 153 189 0 0 0 chr5 197983850 197983871 -1646279 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 1741 112 8 4 chr5 197983875 197984134 -1646016 - AluSg SINE Alu -50 260 1 2103 93 13 19 chr5 197985417 197985730 -1644420 + AluSx SINE Alu 1 311 -1 1165 229 132 5 chr5 197989655 197990048 -1640102 - L1MB8 LINE L1 -13 6165 5723 1794 133 58 0 chr5 197990882 197991160 -1638990 + AluSx SINE Alu 12 305 -7 250 253 184 11 chr5 197992137 197992224 -1637926 - MIR SINE MIR -83 179 78 2093 110 0 7 chr5 197993849 197994148 -1636002 - AluSx SINE Alu -15 297 1 2012 96 71 0 chr5 197994280 197994562 -1635588 - AluSq SINE Alu -11 302 1 2118 61 61 0 chr5 197994988 197995265 -1634885 - AluY SINE Alu -17 294 1 439 104 0 0 chr5 197995791 197995858 -1634292 - MER41B LTR ERV1 -88 547 481 2297 82 3 22 chr5 197996036 197996354 -1633796 - AluSp SINE Alu 0 313 2 326 291 46 40 chr5 197996444 197996595 -1633555 + HAL1 LINE L1 34 185 -2322 1025 233 112 70 chr5 197997063 197997497 -1632653 + HAL1 LINE L1 788 1202 -1305 1322 198 3 48 chr5 197997497 197997824 -1632326 + AluJb SINE Alu 3 316 0 1025 233 112 70 chr5 197997824 197998082 -1632068 + HAL1 LINE L1 1202 1586 -921 1260 194 61 58 chr5 197998082 197998229 -1631921 - AluJo SINE Alu -7 295 150 2079 104 7 32 chr5 197998229 197998537 -1631613 - AluSg1 SINE Alu -9 300 1 1260 194 61 58 chr5 197998537 197998683 -1631467 - AluJo SINE Alu -152 150 1 1025 233 112 70 chr5 197998683 197998769 -1631381 + HAL1 LINE L1 1586 1667 -840 332 238 95 95 chr5 197999023 197999061 -1631089 + HAL1 LINE L1 2005 2042 -465 2159 105 0 10 chr5 197999061 197999365 -1630785 + AluSx SINE Alu 1 301 -11 332 238 95 95 chr5 197999365 197999469 -1630681 + HAL1 LINE L1 2042 2150 -357 2264 84 0 3 chr5 197999469 197999765 -1630385 - AluSc SINE Alu -14 295 1 332 238 95 95 chr5 197999765 197999789 -1630361 + HAL1 LINE L1 2149 2172 -335 10168 42 57 1 chr5 198002084 198003389 -1626761 - SVA Other Other 0 1386 31 1891 102 4 0 chr5 198003390 198003436 -1626714 - L1PB2 LINE L1 -181 5970 5925 609 307 19 26 chr5 198003436 198003703 -1626447 - L1ME2 LINE L1 -240 5924 5660 359 298 74 0 chr5 198003703 198003824 -1626326 + L2 LINE L2 2509 2638 -676 2222 92 3 0 chr5 198006088 198006381 -1623769 + AluSx SINE Alu 1 294 -18 1485 162 81 4 chr5 198006392 198006663 -1623487 + AluJb SINE Alu 1 292 -20 2383 79 0 0 chr5 198006663 198006966 -1623184 + AluSq SINE Alu 1 303 -10 197 364 39 0 chr5 198007272 198007349 -1622801 - MIR SINE MIR -162 100 21 1577 146 25 75 chr5 198007547 198007674 -1622476 + AluJo SINE Alu 1 133 -179 1927 107 19 0 chr5 198007674 198007936 -1622214 - AluSx SINE Alu -45 267 1 1577 146 25 75 chr5 198007936 198008130 -1622020 + AluJo SINE Alu 133 306 -6 1373 160 91 22 chr5 198008850 198009125 -1621025 - AluJo SINE Alu -16 296 3 2234 70 0 64 chr5 198010097 198010427 -1619723 + AluY SINE Alu 1 309 -2 2062 139 3 0 chr5 198010445 198010755 -1619395 + AluSx SINE Alu 1 311 -1 246 105 0 0 chr5 198010755 198010793 -1619357 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 520 218 0 0 chr5 198010891 198010992 -1619158 + AluJb SINE Alu 208 308 -4 1772 165 3 3 chr5 198011164 198011476 -1618674 + AluJo SINE Alu 1 312 0 603 138 5 2 chr5 198011977 198012169 -1617981 + AluSx SINE Alu 1 236 -73 1190 141 9 33 chr5 198012203 198012416 -1617734 - AluJb SINE Alu -88 224 17 682 185 28 11 chr5 198012430 198012608 -1617542 - L1M4 LINE L1 -1763 4383 4203 642 264 93 7 chr5 198012618 198012898 -1617252 - L1MEd LINE L1 -4862 1257 954 809 115 0 0 chr5 198012900 198013013 -1617137 - AluSx SINE Alu -6 304 192 1095 99 0 0 chr5 198013014 198013155 -1616995 - AluSx SINE Alu -171 141 1 289 315 133 71 chr5 198013160 198013203 -1616947 - L1MEd LINE L1 -5164 955 916 1734 157 7 20 chr5 198013203 198013503 -1616647 - AluSx SINE Alu -16 296 1 289 315 133 71 chr5 198013503 198013540 -1616610 - L1MEd LINE L1 -5203 916 883 874 133 8 184 chr5 198013540 198013774 -1616376 + 7SK RNA RNA 1 193 0 289 315 133 71 chr5 198013774 198013982 -1616168 - L1MEd LINE L1 -5236 883 689 2116 120 3 0 chr5 198013982 198014283 -1615867 - AluSc SINE Alu -7 302 1 289 315 133 71 chr5 198014283 198014740 -1615410 - L1MEd LINE L1 -5430 689 261 616 141 0 0 chr5 198014740 198014832 -1615318 - HY4 scRNA scRNA 0 93 2 289 315 133 71 chr5 198014832 198014864 -1615286 - L1MEd LINE L1 -5858 261 232 2238 98 7 7 chr5 198014864 198015171 -1614979 - AluSg SINE Alu -3 307 1 289 315 133 71 chr5 198015171 198015287 -1614863 - L1MEd LINE L1 -5887 232 3 283 344 52 13 chr5 198015376 198015530 -1614620 + MER5B DNA MER1_type 1 160 -18 350 250 58 128 chr5 198016027 198016199 -1613951 + L1ME LINE L1 5300 5459 -2349 1355 268 78 37 chr5 198016205 198016668 -1613482 - L2 LINE L2 -4 3309 2828 927 233 45 0 chr5 198018021 198018244 -1611906 + MER45B DNA AcHobo 80 312 -728 401 333 8 8 chr5 198018244 198018376 -1611774 - L2 LINE L2 -1377 1937 1806 465 283 94 6 chr5 198018552 198018812 -1611338 + MLT1J2 LTR MaLR 154 393 -16 182 304 25 25 chr5 198018979 198019058 -1611092 - L2 LINE L2 -184 3088 3010 207 0 0 0 chr5 198019307 198019330 -1610820 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2297 79 3 3 chr5 198019388 198019692 -1610458 + AluY SINE Alu 1 304 -7 1735 114 0 34 chr5 198019739 198020002 -1610148 + AluSx SINE Alu 49 302 -10 272 237 29 79 chr5 198020002 198020141 -1610009 + L1ME LINE L1 5624 5755 -366 260 361 87 27 chr5 198020174 198020506 -1609644 - L2 LINE L2 -42 3271 2920 318 333 113 7 chr5 198020736 198020877 -1609273 + L2 LINE L2 3158 3313 0 2068 101 11 0 chr5 198021188 198021495 -1608655 + AluSg SINE Alu 1 310 0 1273 116 0 11 chr5 198021527 198021708 -1608442 - AluSx SINE Alu -133 179 1 2406 52 0 0 chr5 198021716 198022007 -1608143 - AluY SINE Alu -10 301 11 239 219 0 85 chr5 198022119 198022201 -1607949 + L1 LINE L1 4883 4957 -1189 524 261 60 0 chr5 198022201 198022335 -1607815 + FLAM_A SINE Alu 1 142 0 394 336 103 23 chr5 198022559 198022773 -1607377 + L1M4 LINE L1 4009 4239 -1907 255 139 0 0 chr5 198022773 198022816 -1607334 - AluS SINE Alu -223 79 37 1941 106 50 13 chr5 198022825 198023126 -1607024 - AluSq SINE Alu -1 312 1 425 333 60 25 chr5 198023132 198023333 -1606817 + L1M4 LINE L1 4215 4422 -1724 2196 96 3 0 chr5 198023601 198023902 -1606248 - AluSg SINE Alu -8 302 1 242 280 182 15 chr5 198023963 198024095 -1606055 + MIR SINE MIR 43 196 -66 1617 155 10 17 chr5 198024171 198024461 -1605689 - AluJb SINE Alu -15 297 10 1618 164 18 7 chr5 198024505 198024815 -1605335 + AluJb SINE Alu 1 313 0 2224 73 0 64 chr5 198024864 198025192 -1604958 + AluSc SINE Alu 1 307 -2 2439 66 7 0 chr5 198025429 198025734 -1604416 + AluSp SINE Alu 2 308 -5 22 0 0 0 chr5 198026626 198026648 -1603502 + GC_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 198027150 198027179 -1602971 + AT_rich Low_complexity Low_complexity 1 29 0 428 62 31 0 chr5 198027270 198027335 -1602815 - AluSq SINE Alu -6 306 240 1594 75 0 0 chr5 198027335 198027534 -1602616 - AluSq SINE Alu -114 199 1 258 216 81 0 chr5 198027997 198028071 -1602079 + MER89 LTR ERV1 1 80 -479 761 225 172 14 chr5 198028091 198028376 -1601774 + MER89 LTR ERV1 229 558 -1 306 289 58 103 chr5 198028711 198028953 -1601197 - L1M4 LINE L1 -1717 4429 4199 790 169 0 15 chr5 198029146 198029276 -1600874 + FRAM SINE Alu 1 122 -54 2285 101 0 0 chr5 198029299 198029605 -1600545 + AluSg SINE Alu 1 306 -4 1318 149 68 42 chr5 198029658 198029967 -1600183 + MER44D DNA MER2_type 23 609 0 184 323 32 0 chr5 198031954 198032016 -1598134 - MIR SINE MIR -110 152 89 816 199 13 0 chr5 198035715 198035871 -1594279 - AluSg/x SINE Alu -18 294 137 1749 105 4 0 chr5 198035873 198036111 -1594039 - AluSq SINE Alu -35 278 40 310 325 52 13 chr5 198036636 198036790 -1593360 + MER5B DNA MER1_type 1 160 -18 422 276 72 30 chr5 198038647 198038941 -1591209 + MLT1K LTR MaLR 254 584 -4 190 114 57 0 chr5 198039897 198039932 -1590218 + L2 LINE L2 2776 2812 -502 677 158 82 22 chr5 198044140 198044323 -1585827 + L1M3 LINE L1 5414 5607 -564 1560 163 0 31 chr5 198044323 198044642 -1585508 + AluJb SINE Alu 1 309 -3 793 174 29 7 chr5 198044662 198044800 -1585350 + AluJo SINE Alu 13 153 -159 10274 41 58 2 chr5 198046620 198047917 -1582233 - SVA Other Other 0 1386 31 1801 98 4 0 chr5 198047918 198047964 -1582186 - L1PB2 LINE L1 -181 5970 5925 563 307 19 26 chr5 198047964 198048231 -1581919 - L1ME2 LINE L1 -240 5924 5660 357 279 74 8 chr5 198048231 198048353 -1581797 + L2 LINE L2 2509 2638 -676 2250 92 3 0 chr5 198050615 198050908 -1579242 + AluSx SINE Alu 1 294 -18 1524 162 81 4 chr5 198050919 198051190 -1578960 + AluJb SINE Alu 1 292 -20 2374 83 0 0 chr5 198051190 198051492 -1578658 + AluSq SINE Alu 1 302 -11 204 364 39 0 chr5 198051798 198051875 -1578275 - MIR SINE MIR -162 100 21 1624 146 25 72 chr5 198052073 198052199 -1577951 + AluJo SINE Alu 1 131 -181 1958 107 19 0 chr5 198052199 198052461 -1577689 - AluSx SINE Alu -45 267 1 1624 146 25 72 chr5 198052461 198052655 -1577495 + AluJo SINE Alu 131 306 -6 1394 167 87 22 chr5 198053373 198053649 -1576501 - AluJo SINE Alu -16 296 3 1814 111 0 73 chr5 198054623 198054938 -1575212 + AluSg SINE Alu 1 292 -18 2087 88 3 14 chr5 198054954 198055248 -1574902 + AluSx SINE Alu 1 291 -21 960 166 105 34 chr5 198055249 198055273 -1574877 - Charlie2 DNA MER1_type -784 2078 2057 2155 84 10 14 chr5 198055273 198055570 -1574580 - AluSp SINE Alu -17 296 1 960 166 105 34 chr5 198055570 198055841 -1574309 - Charlie2 DNA MER1_type -805 2057 1762 748 204 121 13 chr5 198055896 198056053 -1574097 - FAM SINE Alu -1 174 1 461 193 76 3 chr5 198056287 198056410 -1573740 + L1M3 LINE L1 5683 5812 -344 422 276 72 30 chr5 198056537 198056831 -1573319 + MLT1K LTR MaLR 254 584 -4 190 114 57 0 chr5 198057881 198057916 -1572234 + L2 LINE L2 2776 2812 -502 910 155 72 0 chr5 198062124 198062305 -1567845 + L1MB3 LINE L1 5414 5607 -564 1828 158 0 10 chr5 198062305 198062615 -1567535 + AluJb SINE Alu 1 307 -5 964 178 99 0 chr5 198062632 198062823 -1567327 + AluJo SINE Alu 11 220 -92 281 109 0 0 chr5 198062823 198062869 -1567281 + FLAM SINE Alu 86 131 -2 23 0 0 0 chr5 198062869 198062892 -1567258 + AT_rich Low_complexity Low_complexity 1 23 0 2177 127 0 3 chr5 198062900 198063214 -1566936 + AluSq SINE Alu 1 313 0 1528 191 99 6 chr5 198063216 198063578 -1566572 + L1MB3 LINE L1 5769 6164 -19 605 188 18 0 chr5 198066138 198066250 -1563900 + L1MA10 LINE L1 6213 6326 -8 468 280 125 44 chr5 198066703 198067024 -1563126 + L2 LINE L2 1208 1554 -1760 306 265 51 0 chr5 198067027 198067125 -1563025 + L1ME3A LINE L1 6060 6162 -8 2191 117 0 0 chr5 198067469 198067767 -1562383 - AluSx SINE Alu -14 298 1 314 267 104 0 chr5 198067774 198067909 -1562241 - HAL1b LINE L1 -515 833 685 359 165 0 102 chr5 198068013 198068101 -1562049 - HAL1b LINE L1 -801 1894 482 1436 132 8 25 chr5 198068107 198068342 -1561808 + AluSx SINE Alu 24 254 -58 1365 145 12 33 chr5 198068436 198068678 -1561472 - AluSx SINE Alu -75 237 1 324 318 69 55 chr5 198068894 198069194 -1560956 - L1M2 LINE L1 -4893 1323 888 194 265 20 0 chr5 198069632 198069681 -1560469 - L2 LINE L2 -158 3155 3106 2721 171 47 8 chr5 198069953 198070484 -1559666 + L1MB3 LINE L1 5557 6108 -75 1061 299 92 32 chr5 198070484 198070651 -1559499 + L2 LINE L2 2506 2662 -651 1352 199 34 28 chr5 198070651 198070827 -1559323 - MER33 DNA MER1_type -2261 324 144 2054 100 3 20 chr5 198070827 198071127 -1559023 + AluSx SINE Alu 1 295 -17 1352 199 34 28 chr5 198071127 198071271 -1558879 - MER33 DNA MER1_type -2441 144 2 1061 299 92 32 chr5 198071271 198071883 -1558267 + L2 LINE L2 2662 3312 -1 1456 247 90 90 chr5 198072357 198073244 -1556906 + L1MC5 LINE L1 6802 7688 -273 2404 45 10 0 chr5 198074556 198074847 -1555303 - AluY SINE Alu -17 294 1 1778 162 16 7 chr5 198075112 198075415 -1554735 + AluJb SINE Alu 1 306 -6 536 248 19 27 chr5 198078329 198078491 -1551659 + MIR SINE MIR 35 188 -72 1891 135 7 0 chr5 198080398 198080680 -1549470 - AluJb SINE Alu -28 284 1 1387 235 145 45 chr5 198081359 198081869 -1548281 + MER34B LTR ERV1 5 565 0 336 157 43 29 chr5 198081877 198081947 -1548203 - AluS SINE Alu -232 71 1 372 152 0 0 chr5 198081947 198082013 -1548137 + MLT1D LTR MaLR 438 503 -2 2004 139 0 3 chr5 198082048 198082343 -1547807 - AluSx SINE Alu -18 294 1 2303 56 0 3 chr5 198082440 198082726 -1547424 - AluY SINE Alu -26 285 1 511 206 84 13 chr5 198082727 198082826 -1547324 - L1M4 LINE L1 -3103 3043 2928 2036 116 0 38 chr5 198082826 198083144 -1547006 - AluSx SINE Alu -6 306 1 511 206 84 13 chr5 198083144 198083199 -1546951 - L1M4 LINE L1 -3218 2928 2878 830 134 0 0 chr5 198083553 198083672 -1546478 + AluSq/x SINE Alu 1 119 -194 2221 97 0 7 chr5 198083672 198083972 -1546178 - AluY SINE Alu -13 298 1 2147 115 0 0 chr5 198083972 198084268 -1545882 - AluSx SINE Alu -16 296 1 199 263 237 0 chr5 198084586 198084662 -1545488 + MIR SINE MIR 118 211 -51 1539 142 127 4 chr5 198085469 198085744 -1544406 + AluJb SINE Alu 3 311 -1 1512 225 45 0 chr5 198086025 198086358 -1543792 + MER82 DNA MER2_type 6 353 -300 1515 148 70 0 chr5 198087022 198087292 -1542858 + AluJb SINE Alu 1 289 -23 773 245 69 9 chr5 198087399 198087632 -1542518 - MIR SINE MIR 0 262 16 386 333 0 36 chr5 198088703 198088841 -1541309 + MIR SINE MIR 79 211 -51 2952 207 38 27 chr5 198088966 198089604 -1540546 + MER82 DNA MER2_type 1 645 -8 2497 40 0 3 chr5 198089740 198090044 -1540106 - AluY SINE Alu -8 303 1 2392 229 116 14 chr5 198090580 198091409 -1538741 - MER69 DNA AcHobo 0 2526 1614 1447 104 10 0 chr5 198091413 198091615 -1538535 - AluSg/x SINE Alu -24 288 85 305 229 0 0 chr5 198092334 198092395 -1537755 + Charlie8 DNA MER1_type 137 197 -2220 210 146 37 61 chr5 198093013 198093095 -1537055 + (CCCCG)n Simple_repeat Simple_repeat 2 81 0 271 198 42 10 chr5 198093144 198093240 -1536910 + (CCCG)n Simple_repeat Simple_repeat 2 100 0 241 145 32 0 chr5 198093404 198093466 -1536684 + (CGGGG)n Simple_repeat Simple_repeat 2 65 0 2122 87 13 7 chr5 198093800 198094100 -1536050 - AluSx SINE Alu -10 302 1 297 200 18 0 chr5 198094809 198094864 -1535286 - MER5A DNA MER1_type 0 189 134 691 174 0 0 chr5 198094869 198094984 -1535166 + FLAM_A SINE Alu 22 136 -6 350 215 0 0 chr5 198095021 198095086 -1535064 - MER5A DNA MER1_type -118 71 7 3680 180 54 28 chr5 198095163 198095793 -1534357 - L1MB7 LINE L1 -16 6168 5509 2234 87 10 3 chr5 198095793 198096093 -1534057 + AluSg SINE Alu 1 302 -8 3680 180 54 28 chr5 198096093 198096289 -1533861 - L1MB7 LINE L1 -675 5509 5320 2331 89 0 0 chr5 198096295 198096598 -1533552 - AluSx SINE Alu -9 303 1 456 250 32 26 chr5 198096982 198097138 -1533012 + MLT1K LTR MaLR 432 588 0 27 0 0 0 chr5 198097496 198097523 -1532627 + AT_rich Low_complexity Low_complexity 1 27 0 1772 169 0 7 chr5 198100267 198100568 -1529582 + AluJb SINE Alu 1 299 -13 2010 121 3 3 chr5 198100579 198100876 -1529274 + AluSx SINE Alu 14 310 -2 211 291 18 0 chr5 198101486 198101541 -1528609 + L2 LINE L2 3247 3302 -11 807 133 140 7 chr5 198101764 198101914 -1528236 + AluJb SINE Alu 134 303 -9 2360 71 0 0 chr5 198102429 198102724 -1527426 + AluY SINE Alu 1 295 -16 1823 147 7 13 chr5 198103239 198103545 -1526605 + AluJb SINE Alu 1 304 -8 201 39 0 0 chr5 198106290 198106316 -1523834 + (TA)n Simple_repeat Simple_repeat 2 27 0 571 104 0 0 chr5 198106316 198106393 -1523757 - AluSp/q SINE Alu -20 293 217 557 234 160 23 chr5 198106393 198106649 -1523501 - HAL1 LINE L1 -178 2329 2039 * 2400 212 43 62 chr5 198106622 198107035 -1523115 - L1ME2 LINE L1 -1 6163 5744 1694 132 4 0 chr5 198107035 198107278 -1522872 + AluSx SINE Alu 1 244 -68 2069 102 3 3 chr5 198107278 198107570 -1522580 + AluSg SINE Alu 18 310 0 2400 212 43 62 chr5 198107570 198107829 -1522321 - L1ME2 LINE L1 -419 5745 5483 2052 124 13 0 chr5 198107829 198108128 -1522022 - AluSx SINE Alu -9 303 1 2400 212 43 62 chr5 198108128 198108175 -1521975 - L1ME2 LINE L1 -681 5483 5437 1668 144 15 0 chr5 198108175 198108438 -1521712 + AluJb SINE Alu 1 267 -45 2400 212 43 62 chr5 198108438 198108933 -1521217 - L1ME2 LINE L1 -727 5437 4779 2223 139 24 60 chr5 198108933 198109351 -1520799 + MER57A LTR ERV1 1 403 0 2400 212 43 62 chr5 198109351 198109424 -1520726 - L1ME2 LINE L1 -1385 4779 4706 749 109 0 0 chr5 198109604 198109705 -1520445 + FLAM_A SINE Alu 22 122 -20 27 0 0 0 chr5 198109705 198109732 -1520418 + AT_rich Low_complexity Low_complexity 1 27 0 2238 88 7 0 chr5 198109734 198110031 -1520119 + AluSp SINE Alu 2 300 -13 1978 104 47 10 chr5 198110035 198110333 -1519817 + AluSx SINE Alu 1 309 -3 2127 186 54 5 chr5 198110552 198110960 -1519190 + MER21B LTR ERV1 5 432 -431 1720 173 7 26 chr5 198111012 198111352 -1518798 - AluJo SINE Alu -1 311 1 260 293 108 52 chr5 198111425 198111674 -1518476 - LTR34 LTR ERV1 -119 580 318 1723 181 45 62 chr5 198111836 198111883 -1518267 + MER21B LTR ERV1 443 489 -374 2403 89 3 10 chr5 198111883 198112197 -1517953 + AluSx SINE Alu 1 312 0 1723 181 45 62 chr5 198112197 198112570 -1517580 + MER21B LTR ERV1 489 852 -11 3194 264 64 45 chr5 198112878 198113100 -1517050 - L1ME3A LINE L1 -5 6148 5932 2303 97 7 13 chr5 198113100 198113409 -1516741 - AluY SINE Alu -4 307 1 3194 264 64 45 chr5 198113409 198114134 -1516016 - L1ME3A LINE L1 -221 5932 5222 2596 54 0 10 chr5 198114134 198114448 -1515702 - AluY SINE Alu 0 311 1 3194 264 64 45 chr5 198114448 198114985 -1515165 - L1ME3A LINE L1 -931 5222 4696 2274 119 0 0 chr5 198114985 198115279 -1514871 + AluJb SINE Alu 1 294 -18 3194 264 64 45 chr5 198115279 198115564 -1514586 - L1ME3A LINE L1 -1457 4696 4418 2368 103 0 3 chr5 198115564 198115875 -1514275 - AluSg SINE Alu 0 310 1 3194 264 64 45 chr5 198115875 198116276 -1513874 - L1ME3A LINE L1 -1735 4418 3931 1936 143 30 10 chr5 198116276 198116577 -1513573 + AluSx SINE Alu 1 307 -5 3194 264 64 45 chr5 198116577 198116631 -1513519 - L1ME3A LINE L1 -2222 3931 3879 2236 88 3 23 chr5 198117006 198117314 -1512836 + AluSx SINE Alu 1 302 -10 2263 99 0 7 chr5 198117787 198118079 -1512071 - AluSx SINE Alu -22 290 1 225 248 9 92 chr5 198118079 198118112 -1512038 - L1ME3A LINE L1 -2391 3738 3704 1960 112 8 0 chr5 198118112 198118371 -1511779 + AluSx SINE Alu 38 298 -14 225 248 9 92 chr5 198118371 198118446 -1511704 - L1ME3A LINE L1 -2425 3704 3639 227 195 98 12 chr5 198118473 198118555 -1511595 + L1M4 LINE L1 3256 3344 -2802 278 53 0 0 chr5 198118593 198118631 -1511519 + L1MB2 LINE L1 6011 6048 -123 758 279 4 28 chr5 198118632 198118883 -1511267 - L1ME3A LINE L1 -2506 3623 3379 255 31 0 0 chr5 198118918 198118950 -1511200 + (TG)n Simple_repeat Simple_repeat 1 32 0 1654 129 4 4 chr5 198119047 198119288 -1510862 - AluJb SINE Alu -17 295 55 719 189 53 6 chr5 198119746 198119923 -1510227 - L1MB2 LINE L1 -44 6127 5928 * 1547 230 108 58 chr5 198119901 198120047 -1510103 - L1ME3A LINE L1 -2802 3327 3190 1444 155 31 65 chr5 198120047 198120370 -1509780 - AluJo SINE Alu 0 312 1 1547 230 108 58 chr5 198120370 198120966 -1509184 - L1ME3A LINE L1 -2939 3190 2548 22 0 0 0 chr5 198121241 198121263 -1508887 + AT_rich Low_complexity Low_complexity 1 22 0 238 271 108 16 chr5 198121510 198121639 -1508511 - L1ME3A LINE L1 -4586 1724 1584 1472 112 108 28 chr5 198121641 198121891 -1508259 - AluJo SINE Alu -12 300 31 913 133 0 60 chr5 198121898 198122048 -1508102 - AluJo SINE Alu -171 141 1 4544 172 34 76 chr5 198122189 198123424 -1506726 + L1MB5 LINE L1 4690 5975 -199 270 0 0 0 chr5 198123424 198123454 -1506696 + (TG)n Simple_repeat Simple_repeat 1 30 0 * 366 42 0 0 chr5 198123453 198123501 -1506649 + (GA)n Simple_repeat Simple_repeat 1 48 0 4544 172 34 76 chr5 198123454 198123501 -1506649 + L1MB5 LINE L1 5975 6022 -152 1837 145 11 4 chr5 198123501 198123777 -1506373 - AluJb SINE Alu -34 278 1 4544 172 34 76 chr5 198123777 198124058 -1506092 + L1MB5 LINE L1 6022 6126 -48 2000 103 44 4 chr5 198124465 198124761 -1505389 + AluSx SINE Alu 1 307 0 2142 89 25 57 chr5 198125741 198126056 -1504094 - AluSg SINE Alu -5 305 1 384 100 0 0 chr5 198126058 198126118 -1504032 + L1MB5 LINE L1 6115 6174 0 549 258 124 46 chr5 198126130 198126697 -1503453 - L1MEd LINE L1 -4772 1357 733 2261 90 3 0 chr5 198128434 198128723 -1501427 + AluSc SINE Alu 1 290 -19 273 261 88 26 chr5 198129100 198129215 -1500935 - MIR SINE MIR -64 144 47 2363 75 10 7 chr5 198129494 198129788 -1500362 - AluSg SINE Alu -15 295 1 1025 104 115 38 chr5 198129977 198130160 -1499990 - AluSg/x SINE Alu -6 304 108 833 151 40 0 chr5 198130163 198130289 -1499861 + AluJo/FRAM SINE Alu 165 295 -17 728 122 0 9 chr5 198130514 198130621 -1499529 + AluSq/x SINE Alu 2 107 -206 2660 30 0 3 chr5 198132074 198132372 -1497778 - AluY SINE Alu -13 298 2 792 233 98 8 chr5 198133011 198133247 -1496903 + MIR SINE MIR 6 262 0 356 262 35 23 chr5 198133272 198133444 -1496706 + (TATATG)n Simple_repeat Simple_repeat 5 178 0 583 286 56 17 chr5 198133566 198133797 -1496353 + MIR SINE MIR 4 243 -19 2294 106 0 16 chr5 198133907 198134219 -1495931 + AluSx SINE Alu 1 307 -5 2420 83 3 3 chr5 198134481 198134783 -1495367 - AluSx SINE Alu -8 304 3 1238 169 29 5 chr5 198134787 198134994 -1495156 - AluJo SINE Alu -15 297 86 2118 142 157 12 chr5 198135201 198135609 -1494541 + LTR24 LTR ERV1 1 467 0 1911 151 7 20 chr5 198135637 198135936 -1494214 - AluSx SINE Alu -17 295 1 4207 196 135 69 chr5 198136691 198136903 -1493247 + L1MB7 LINE L1 2452 2649 -3535 2051 27 0 0 chr5 198136903 198137128 -1493022 - AluY SINE Alu -12 299 75 4207 196 135 69 chr5 198137128 198137571 -1492579 + L1MB7 LINE L1 2649 3061 -3123 922 161 25 6 chr5 198137571 198137732 -1492418 + AluJb SINE Alu 137 300 -12 4207 196 135 69 chr5 198137732 198140246 -1489904 + L1MB7 LINE L1 3061 6165 -19 421 264 37 18 chr5 198140581 198140744 -1489406 - L2 LINE L2 0 3272 3107 23 33 0 0 chr5 198140999 198141029 -1489121 + AT_rich Low_complexity Low_complexity 1 30 0 2171 130 0 0 chr5 198142649 198142957 -1487193 + AluSx SINE Alu 1 308 -4 2790 13 0 0 chr5 198143398 198143696 -1486454 - AluYa5 SINE Alu -13 298 1 530 267 114 17 chr5 198143711 198143947 -1486203 - MER112 DNA MER1_type -1 259 1 279 187 47 147 chr5 198144100 198144206 -1485944 - L3 LINE CR1 -101 1476 1388 2143 122 20 0 chr5 198144206 198144500 -1485650 - AluSq SINE Alu -13 300 1 279 187 47 147 chr5 198144500 198144543 -1485607 - L3 LINE CR1 -189 1388 1342 201 281 42 52 chr5 198144604 198144700 -1485450 + MIR SINE MIR 165 259 -3 275 280 187 33 chr5 198144723 198144880 -1485270 - L3 LINE CR1 -304 1273 1083 2162 97 0 7 chr5 198144880 198145159 -1484991 + AluSg1 SINE Alu 16 292 -17 275 280 187 33 chr5 198145159 198145183 -1484967 - L3 LINE CR1 -494 1083 1064 30 27 0 0 chr5 198145565 198145602 -1484548 + AT_rich Low_complexity Low_complexity 1 37 0 558 286 102 5 chr5 198147418 198147624 -1482526 - MIR SINE MIR -8 254 29 420 327 194 16 chr5 198148224 198148787 -1481363 - L3 LINE CR1 -27 1550 888 199 116 0 93 chr5 198150777 198150820 -1479330 + L2 LINE L2 3247 3285 -28 183 209 0 0 chr5 198151038 198151081 -1479069 + L2 LINE L2 3269 3311 -2 2406 46 7 0 chr5 198153533 198153840 -1476310 + AluY SINE Alu 1 309 0 2311 112 0 0 chr5 198153903 198154215 -1475935 + AluSx SINE Alu 1 312 0 769 218 104 16 chr5 198154265 198154458 -1475692 + MER20 DNA MER1_type 8 217 -2 1707 145 44 27 chr5 198155106 198155227 -1474923 + AluJo SINE Alu 2 119 -193 2385 81 0 3 chr5 198155227 198155525 -1474625 + AluSq SINE Alu 1 297 -16 1707 145 44 27 chr5 198155525 198155699 -1474451 + AluJo SINE Alu 119 302 -10 2396 80 0 0 chr5 198156888 198157188 -1472962 - AluY SINE Alu -11 300 1 591 177 150 14 chr5 198160842 198160989 -1469161 + MER20 DNA MER1_type 53 219 0 724 134 34 0 chr5 198161572 198161691 -1468459 + AluJo SINE Alu 14 136 -176 22 0 0 0 chr5 198162210 198162232 -1467918 + AT_rich Low_complexity Low_complexity 1 22 0 270 319 117 18 chr5 198162609 198162772 -1467378 + MIR SINE MIR 62 240 -22 771 183 0 16 chr5 198162962 198163088 -1467062 + AluJo/FLAM SINE Alu 2 125 -177 2244 93 3 10 chr5 198163090 198163424 -1466726 + AluSx SINE Alu 1 312 0 320 287 62 23 chr5 198166708 198166837 -1463313 + MER94 DNA DNA 1 134 0 671 273 103 44 chr5 198166964 198167370 -1462780 - L1MC5 LINE L1 -48 7913 7484 262 222 0 0 chr5 198167377 198167440 -1462710 - L1MA10 LINE L1 -3 6331 6269 2527 229 88 29 chr5 198167516 198168086 -1462064 - L1ME1 LINE L1 -99 6067 5532 1574 189 3 31 chr5 198168086 198168403 -1461747 - AluJb SINE Alu 0 309 1 2527 229 88 29 chr5 198168403 198169437 -1460713 - L1ME1 LINE L1 -634 5532 4367 789 186 0 0 chr5 198169445 198169558 -1460592 - FLAM_A SINE Alu -20 122 10 2224 238 84 27 chr5 198169589 198170304 -1459846 - L1ME1 LINE L1 -1787 4359 3604 1077 160 90 0 chr5 198170326 198170514 -1459636 + MER46A DNA MER2_type 31 235 -1 9476 162 73 23 chr5 198170559 198172360 -1457790 - Tigger2 DNA MER2_type -691 2027 136 7667 232 78 42 chr5 198172389 198172679 -1457471 - L1PBb LINE L1 -1713 5136 4858 1938 152 0 7 chr5 198172679 198172988 -1457162 - AluJb SINE Alu -5 307 1 7667 232 78 42 chr5 198172988 198174493 -1455657 - L1PBb LINE L1 -1991 4858 3408 2344 109 55 33 chr5 198174493 198174860 -1455290 - THE1C LTR MaLR 0 375 1 7667 232 78 42 chr5 198174860 198175535 -1454615 - L1PBb LINE L1 -3441 3408 2758 7693 85 24 21 chr5 198175535 198176539 -1453611 - LTR13 LTR ERVK 0 1007 1 7667 232 78 42 chr5 198176539 198177143 -1453007 - L1PBb LINE L1 -4091 2758 2060 3263 126 11 2 chr5 198177146 198177614 -1452536 - MER1A DNA MER1_type 0 529 58 2474 67 0 3 chr5 198177661 198177961 -1452189 - AluY SINE Alu -12 299 1 339 156 91 0 chr5 198177968 198178045 -1452105 - L1PBb LINE L1 -4791 2058 1975 689 229 33 112 chr5 198178081 198178244 -1451906 - L1PBb LINE L1 -5114 1736 1562 8450 42 17 2 chr5 198178244 198180008 -1450142 - L1PA5 LINE L1 0 6154 4375 689 229 33 112 chr5 198180008 198180283 -1449867 - L1PBb LINE L1 -5288 1562 1336 * 834 312 19 53 chr5 198180269 198180682 -1449468 - L1PA12 LINE L1 -5286 1563 1165 1520 262 32 63 chr5 198180850 198181483 -1448667 - L1PA12 LINE L1 -6232 617 5 10576 230 87 35 chr5 198181498 198182645 -1447505 - L1 LINE L1 -1509 5658 4571 1525 161 0 109 chr5 198182645 198182854 -1447296 - AluY SINE Alu 0 311 154 2268 75 0 17 chr5 198182854 198183147 -1447003 - AluY SINE Alu -23 288 1 1525 161 0 109 chr5 198183147 198183286 -1446864 - AluY SINE Alu -157 154 1 10576 230 87 35 chr5 198183286 198183360 -1446790 - L1 LINE L1 -2596 4571 4502 2292 101 3 0 chr5 198183360 198183658 -1446492 - AluSc SINE Alu -10 299 1 10576 230 87 35 chr5 198183658 198184000 -1446150 - L1 LINE L1 -2665 4502 4179 641 222 0 8 chr5 198184000 198184117 -1446033 - FLAM_A SINE Alu -17 116 1 10576 230 87 35 chr5 198184117 198184379 -1445771 - L1 LINE L1 -2988 4179 3932 230 56 28 0 chr5 198184379 198184415 -1445735 + (TA)n Simple_repeat Simple_repeat 2 38 0 10576 230 87 35 chr5 198184415 198184530 -1445620 - L1 LINE L1 -3235 3932 3824 2207 123 7 0 chr5 198184530 198184840 -1445310 - AluSx SINE Alu 0 312 1 10576 230 87 35 chr5 198184840 198184959 -1445191 - L1 LINE L1 -3343 3824 3713 2241 112 16 0 chr5 198184959 198185263 -1444887 + AluSx SINE Alu 1 309 -3 10576 230 87 35 chr5 198185263 198188430 -1441720 - L1 LINE L1 -3454 3713 3 767 228 43 0 chr5 198189427 198189611 -1440539 - MIR SINE MIR -1 261 70 206 221 71 197 chr5 198189610 198189737 -1440413 + MER5A DNA MER1_type 78 188 -1 * 290 286 126 42 chr5 198189904 198190023 -1440127 - MIR SINE MIR -64 144 16 2121 110 0 3 chr5 198190665 198190955 -1439195 + AluSx SINE Alu 1 289 -23 271 247 55 14 chr5 198191350 198191423 -1438727 - L2 LINE L2 -4 3268 3193 2099 137 0 0 chr5 198192638 198192938 -1437212 + AluSx SINE Alu 1 300 -12 180 0 0 0 chr5 198193508 198193528 -1436622 + (T)n Simple_repeat Simple_repeat 1 20 0 338 307 31 12 chr5 198193709 198193872 -1436278 + L1MD2 LINE L1 276 441 -6099 1307 240 42 24 chr5 198193921 198194122 -1436028 + L1MD2 LINE L1 3032 3228 -3312 1965 161 3 0 chr5 198194122 198194426 -1435724 + AluSx SINE Alu 1 305 -7 1307 240 42 24 chr5 198194426 198194633 -1435517 + L1MD2 LINE L1 3228 3447 -3093 4533 176 45 83 chr5 198194636 198195484 -1434666 + L1MD2 LINE L1 5393 6271 -482 1626 110 18 64 chr5 198195484 198195810 -1434340 + AluYb8 SINE Alu 1 311 -7 4533 176 45 83 chr5 198195810 198195914 -1434236 + L1MD2 LINE L1 6271 6377 -376 2076 136 3 3 chr5 198195914 198196215 -1433935 - AluSx SINE Alu -11 301 1 4533 176 45 83 chr5 198196215 198196652 -1433498 + L1MD2 LINE L1 6377 6731 -22 1469 186 150 77 chr5 198196648 198197041 -1433109 + L1MC4 LINE L1 7471 7915 -127 * 1519 191 14 14 chr5 198197041 198197335 -1432815 + AluJo SINE Alu 1 294 -18 1469 186 150 77 chr5 198197335 198197474 -1432676 + L1MC4 LINE L1 7915 8042 0 1832 156 17 3 chr5 198200259 198200554 -1429596 + AluJb SINE Alu 1 299 -13 257 143 0 0 chr5 198200903 198200945 -1429205 + MARNA DNA Mariner 199 240 -346 423 155 60 0 chr5 198200998 198201166 -1428984 + GA-rich Low_complexity Low_complexity 1 178 0 400 98 0 122 chr5 198201124 198201329 -1428821 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 * 243 116 47 0 chr5 198201449 198201492 -1428658 - L2 LINE L2 -3 3310 3266 183 205 26 0 chr5 198201460 198201499 -1428651 - MIR SINE MIR -9 253 214 * 1989 262 95 29 chr5 198202277 198203128 -1427022 - L1MC4 LINE L1 -1 8041 7135 185 245 0 20 chr5 198203399 198203448 -1426702 + MIR SINE MIR 95 142 -120 1712 115 138 63 chr5 198203505 198203575 -1426575 - THE1C LTR MaLR 0 375 312 2329 113 3 0 chr5 198203575 198203886 -1426264 + AluSx SINE Alu 1 312 0 1712 115 138 63 chr5 198203886 198204162 -1425988 - THE1C LTR MaLR -63 312 3 2577 50 0 0 chr5 198204663 198204961 -1425189 + AluY SINE Alu 1 298 -13 2020 101 0 75 chr5 198206546 198206864 -1423286 - AluSc SINE Alu -15 294 1 33 0 0 0 chr5 198207185 198207218 -1422932 + AT_rich Low_complexity Low_complexity 1 33 0 879 267 157 20 chr5 198207273 198207674 -1422476 - L1MC4 LINE L1 -151 7891 7436 1298 218 108 79 chr5 198207952 198208523 -1421627 + L1M4 LINE L1 2603 3201 -2945 1450 152 31 65 chr5 198208523 198208846 -1421304 + AluJo SINE Alu 1 312 0 1298 218 108 79 chr5 198208846 198208995 -1421155 + L1M4 LINE L1 3201 3344 -2802 707 197 53 6 chr5 198208973 198209150 -1421000 + L1MB2 LINE L1 5928 6127 -44 * 1089 122 65 23 chr5 198209626 198209840 -1420310 + AluJb SINE Alu 73 295 -17 453 19 0 0 chr5 198209937 198209991 -1420159 + (CA)n Simple_repeat Simple_repeat 1 54 0 676 257 16 47 chr5 198210025 198210278 -1419872 + L1M4 LINE L1 3396 3640 -2506 251 51 0 26 chr5 198210279 198210318 -1419832 - L1MB2 LINE L1 -123 6048 6011 3023 156 32 101 chr5 198210562 198211286 -1418864 + L1MC3 LINE L1 6409 7082 -703 635 155 35 147 chr5 198261355 198261587 -1368563 + MLT1A1 LTR MaLR 160 365 0 3584 224 51 13 chr5 198261604 198261929 -1368221 - L1MDa LINE L1 -2526 4014 3703 3014 165 178 3 chr5 198261929 198262273 -1367877 - MER44D DNA MER2_type -1882 605 322 2483 70 0 0 chr5 198262273 198262575 -1367575 + AluY SINE Alu 2 303 -8 2478 80 0 0 chr5 198262577 198262879 -1367271 + AluSx SINE Alu 1 302 -10 3014 165 178 3 chr5 198262879 198263155 -1366995 - MER44D DNA MER2_type -2165 322 1 3584 224 51 13 chr5 198263155 198264404 -1365746 - L1MDa LINE L1 -2837 3703 2390 2755 173 28 51 chr5 198264384 198264591 -1365559 - L1MDa LINE L1 -4606 1934 1724 * 1844 158 0 40 chr5 198264591 198264913 -1365237 - AluSx SINE Alu -3 309 1 2755 173 28 51 chr5 198264913 198265183 -1364967 - L1MDa LINE L1 -4816 1724 1475 2191 120 0 0 chr5 198265183 198265492 -1364658 - AluY SINE Alu -2 309 1 2755 173 28 51 chr5 198265492 198265705 -1364445 - L1MDa LINE L1 -5065 1475 1259 221 269 204 0 chr5 198265928 198266021 -1364129 + L2 LINE L2 3202 3313 0 2461 53 0 7 chr5 198266166 198266470 -1363680 + AluY SINE Alu 1 302 -9 1993 197 61 31 chr5 198266471 198267047 -1363103 + MLT1D LTR MaLR 6 626 0 182 322 69 0 chr5 198267111 198267198 -1362952 - MIR SINE MIR -91 171 79 189 0 0 0 chr5 198267384 198267405 -1362745 + (T)n Simple_repeat Simple_repeat 1 21 0 2126 118 0 0 chr5 198267811 198268108 -1362042 - AluSg SINE Alu -12 298 2 201 211 96 0 chr5 198268111 198268163 -1361987 - MIR SINE MIR -99 163 107 200 243 9 112 chr5 198269475 198269582 -1360568 - MIR SINE MIR -63 145 50 238 129 10 119 chr5 198269847 198270048 -1360102 + (CGGA)n Simple_repeat Simple_repeat 2 180 0 389 178 40 52 chr5 198270060 198270390 -1359760 + (CGGA)n Simple_repeat Simple_repeat 1 325 0 386 180 42 11 chr5 198270399 198270663 -1359487 + (TGGA)n Simple_repeat Simple_repeat 1 272 0 282 195 39 13 chr5 198270681 198270758 -1359392 - L2 LINE L2 -180 3092 3014 1928 82 4 4 chr5 198271791 198272047 -1358103 - AluSg SINE Alu -20 290 35 27 0 0 0 chr5 198272053 198272080 -1358070 + AT_rich Low_complexity Low_complexity 1 27 0 542 282 79 22 chr5 198272394 198272621 -1357529 - MIR SINE MIR -14 248 9 230 235 20 0 chr5 198273195 198273246 -1356904 + CT-rich Low_complexity Low_complexity 1 52 0 410 323 50 0 chr5 198273628 198273789 -1356361 + MIR SINE MIR 21 189 -73 2278 100 0 0 chr5 198274479 198274780 -1355370 + AluSx SINE Alu 1 301 -11 625 305 194 24 chr5 198274826 198275291 -1354859 + L3 LINE CR1 957 1500 -77 2428 48 0 0 chr5 198278085 198278380 -1351770 - AluY SINE Alu -16 295 1 315 0 0 0 chr5 198278405 198278440 -1351710 + (CA)n Simple_repeat Simple_repeat 1 35 0 2005 247 84 18 chr5 198278443 198279002 -1351148 - MER82 DNA MER2_type -8 645 50 2305 103 0 0 chr5 198279219 198279531 -1350619 + AluSq SINE Alu 1 312 -1 417 287 106 35 chr5 198279728 198280010 -1350140 + L1M4 LINE L1 2207 2508 -3638 1043 273 72 7 chr5 198280202 198280796 -1349354 + L1M4 LINE L1 2845 3477 -2669 1063 59 0 0 chr5 198280880 198281016 -1349134 + AluY SINE Alu 170 305 -6 909 264 97 82 chr5 198281018 198281302 -1348848 + L1M4 LINE L1 3520 3798 -2348 2021 135 3 0 chr5 198281302 198281606 -1348544 + AluSq SINE Alu 1 305 -8 1851 164 0 3 chr5 198281609 198281921 -1348229 + AluJb SINE Alu 1 311 -1 909 264 97 82 chr5 198281921 198282252 -1347898 + L1M4 LINE L1 3799 4148 -1998 2272 74 3 14 chr5 198282259 198282556 -1347594 + AluSp SINE Alu 1 294 -19 539 144 81 0 chr5 198282559 198282670 -1347480 + Charlie1 DNA MER1_type 2637 2756 -5 310 277 68 12 chr5 198282672 198282834 -1347316 + L1M4 LINE L1 5646 5820 -358 2338 61 3 0 chr5 198282880 198283176 -1346974 + AluY SINE Alu 1 297 -14 677 311 130 37 chr5 198283266 198283780 -1346370 - L1MC4a LINE L1 -1851 5957 5396 409 188 125 0 chr5 198284746 198284858 -1345292 + MIR SINE MIR 12 137 -125 251 342 44 0 chr5 198286792 198286906 -1343244 - L2 LINE L2 -19 3294 3176 297 291 176 15 chr5 198287714 198287975 -1342175 + L2 LINE L2 2451 2753 -561 2353 73 3 0 chr5 198289442 198289742 -1340408 + AluSg SINE Alu 1 301 -9 382 189 78 0 chr5 198290188 198290278 -1339872 - MIR SINE MIR -87 175 79 303 289 76 30 chr5 198290358 198290555 -1339595 + L1MC5 LINE L1 7708 7913 -48 377 265 29 0 chr5 198290678 198290780 -1339370 - MIR SINE MIR -79 183 79 233 316 45 15 chr5 198291368 198291501 -1338649 + (TCCA)n Simple_repeat Simple_repeat 1 137 0 777 199 0 0 chr5 198291629 198292106 -1338044 + (CCCA)n Simple_repeat Simple_repeat 1 477 0 548 234 6 0 chr5 198292133 198292300 -1337850 + (CCCA)n Simple_repeat Simple_repeat 2 169 0 298 329 19 13 chr5 198292304 198292459 -1337691 + (TCCA)n Simple_repeat Simple_repeat 4 159 0 258 197 13 40 chr5 198292606 198292682 -1337468 + GA-rich Low_complexity Low_complexity 2 75 0 230 333 54 18 chr5 198293061 198293172 -1336978 - MIR SINE MIR -87 175 61 344 303 138 31 chr5 198294285 198294675 -1335475 + MLT1K LTR MaLR 132 563 -25 195 318 106 15 chr5 198294864 198294996 -1335154 + MIR SINE MIR 27 170 -92 421 266 96 48 chr5 198295855 198296043 -1334107 + MLT1K LTR MaLR 160 356 -232 324 255 161 13 chr5 198296141 198296435 -1333715 + L2 LINE L2 2758 3085 -187 598 291 54 31 chr5 198298510 198298768 -1331382 - L1MC4a LINE L1 -1777 6267 6004 1702 216 73 2 chr5 198298783 198299196 -1330954 + L1MB3 LINE L1 5732 6173 -10 1556 116 36 0 chr5 198299198 198299422 -1330728 - AluSc SINE Alu -15 294 63 1364 163 0 13 chr5 198301899 198302132 -1328018 + AluJo SINE Alu 70 299 -13 2197 144 58 28 chr5 198302137 198302586 -1327564 - L1MB3 LINE L1 -16 6167 5547 2199 84 16 16 chr5 198302586 198302897 -1327253 - AluSx SINE Alu -1 311 1 2197 144 58 28 chr5 198302897 198303136 -1327014 - L1MB3 LINE L1 -636 5547 5317 289 280 75 0 chr5 198303176 198303283 -1326867 - LTR50 LTR ERVL -169 626 512 1185 228 0 14 chr5 198303341 198303630 -1326520 - L1MC4a LINE L1 -813 5569 5285 1612 144 46 28 chr5 198303630 198303914 -1326236 - AluSx SINE Alu -23 289 1 9518 183 63 66 chr5 198303914 198305371 -1324779 - L1MC4a LINE L1 -2120 4262 2802 255 132 0 0 chr5 198305371 198305409 -1324741 + tRNA-Phe-TTC tRNA tRNA 1 38 -38 9518 183 63 66 chr5 198305409 198306552 -1323598 - L1MC4a LINE L1 -3580 2802 1657 2261 99 0 22 chr5 198306552 198306864 -1323286 - AluSc SINE Alu -1 308 4 9518 183 63 66 chr5 198306864 198306920 -1323230 - L1MC4a LINE L1 -4725 1657 1602 2105 92 0 11 chr5 198306920 198307228 -1322922 - AluSc SINE Alu 0 305 1 9518 183 63 66 chr5 198307228 198308022 -1322128 - L1MC4a LINE L1 -4780 1602 807 850 88 26 0 chr5 198308022 198308136 -1322014 + AluSp SINE Alu 1 117 -196 11277 25 8 0 chr5 198308136 198310200 -1319950 + L1PA4 LINE L1 4086 6155 0 1505 74 5 5 chr5 198310205 198310407 -1319743 + AluSq SINE Alu 104 305 -8 9518 183 63 66 chr5 198310407 198311063 -1319087 - L1MC4a LINE L1 -5578 804 9 371 302 229 5 chr5 198311119 198311324 -1318826 - L1M4 LINE L1 -1827 4319 4069 247 331 86 29 chr5 198311907 198312055 -1318095 - MIR SINE MIR -56 206 45 2284 80 0 3 chr5 198312055 198312354 -1317796 - AluY SINE Alu -13 298 1 247 331 86 29 chr5 198312354 198312380 -1317770 - MIR SINE MIR -217 45 22 5910 133 41 22 chr5 198313939 198313961 -1316189 + L1MC1 LINE L1 5254 5274 -1059 1996 149 3 13 chr5 198313961 198314269 -1315881 + AluJb SINE Alu 1 305 -7 5910 133 41 22 chr5 198314269 198314813 -1315337 + L1MC1 LINE L1 5274 5852 -481 2514 70 3 22 chr5 198314813 198315125 -1315025 + AluSp SINE Alu 1 306 -7 5910 133 41 22 chr5 198315125 198315612 -1314538 + L1MC1 LINE L1 5852 6328 -5 2444 254 145 33 chr5 198315675 198316054 -1314096 - HAL1 LINE L1 -628 1879 1544 583 200 9 17 chr5 198316054 198316169 -1313981 - MER81 DNA DNA 0 114 1 2444 254 145 33 chr5 198316169 198316599 -1313551 - HAL1 LINE L1 -963 1544 1163 2253 111 3 16 chr5 198316599 198316915 -1313235 - AluSx SINE Alu 0 312 1 2444 254 145 33 chr5 198316915 198317153 -1312997 - HAL1 LINE L1 -1344 1163 714 4561 235 62 68 chr5 198320168 198321867 -1308283 - L1MDa LINE L1 -1462 4944 3256 353 100 0 0 chr5 198321867 198321927 -1308223 - L1MA7 LINE L1 -6 6285 6226 4561 235 62 68 chr5 198321927 198322064 -1308086 - L1MDa LINE L1 -3150 3256 3120 2973 221 79 49 chr5 198322219 198322278 -1307872 - L1MDa LINE L1 -4081 2325 2269 2583 75 0 0 chr5 198322278 198322584 -1307566 - AluY SINE Alu -5 306 1 2973 221 79 49 chr5 198322584 198323045 -1307105 - L1MDa LINE L1 -4137 2269 1823 2449 95 0 3 chr5 198323045 198323351 -1306799 - AluSq SINE Alu -8 305 1 2973 221 79 49 chr5 198323351 198323908 -1306242 - L1MDa LINE L1 -4583 1823 1215 671 132 9 0 chr5 198323918 198324065 -1306085 + AluSg/x SINE Alu 176 323 0 1100 259 30 50 chr5 198324065 198324506 -1305644 - L1MDa LINE L1 -5196 1213 782 214 50 50 0 chr5 198324643 198324683 -1305467 + (CAAAAA)n Simple_repeat Simple_repeat 1 42 0 2343 96 3 10 chr5 198324684 198324996 -1305154 + AluSp SINE Alu 1 310 -3 453 227 65 0 chr5 198325670 198325824 -1304326 - MER113 DNA MER1_type? -293 228 65 183 163 70 128 chr5 198325831 198325917 -1304233 + L2 LINE L2 2888 2968 -346 253 294 43 33 chr5 198329712 198329804 -1300346 + Charlie8 DNA MER1_type 129 221 -2196 2466 68 7 16 chr5 198330148 198330457 -1299693 + AluSg SINE Alu 1 306 -4 741 214 0 0 chr5 198330909 198331159 -1298991 + (TG)n Simple_repeat Simple_repeat 1 250 0 182 279 0 59 chr5 198331327 198331395 -1298755 - MIR SINE MIR -67 141 78 200 197 6 19 chr5 198331819 198331873 -1298277 + MER5B DNA MER1_type 34 99 -90 2260 67 39 0 chr5 198332222 198332506 -1297644 + AluY SINE Alu 1 295 -16 2648 50 0 0 chr5 198333061 198333360 -1296790 - AluY SINE Alu -12 299 1 782 245 152 43 chr5 198334171 198334470 -1295680 + MLT1K LTR MaLR 143 408 -180 2161 97 10 42 chr5 198334470 198334778 -1295372 - AluSc SINE Alu -11 298 1 2340 112 3 0 chr5 198334781 198335084 -1295066 - AluSx SINE Alu -8 304 1 782 245 152 43 chr5 198335084 198335176 -1294974 + MLT1K LTR MaLR 409 581 -7 590 265 47 0 chr5 198337229 198337399 -1292751 - L1ME3A LINE L1 -2 6168 5991 467 238 105 33 chr5 198337712 198337849 -1292301 + L1ME LINE L1 1788 1947 -4449 1373 223 127 10 chr5 198337849 198337975 -1292175 + MLT1C LTR MaLR 1 111 -356 219 69 0 0 chr5 198337975 198338004 -1292146 + (GAGTG)n Simple_repeat Simple_repeat 4 32 0 1373 223 127 10 chr5 198338004 198338295 -1291855 + MLT1C LTR MaLR 111 467 0 467 238 105 33 chr5 198338295 198338367 -1291783 + L1ME LINE L1 1947 2012 -4384 1942 88 168 162 chr5 198338376 198338426 -1291724 - LTR12 LTR ERV1 -142 2017 1969 2750 32 0 6 chr5 198338426 198338739 -1291411 + AluY SINE Alu 1 311 0 1942 88 168 162 chr5 198338739 198339278 -1290872 - LTR12 LTR ERV1 -190 1969 57 258 231 0 0 chr5 198339278 198339330 -1290820 - LTR30 LTR ERV1 -670 52 1 1424 202 164 15 chr5 198339360 198339879 -1290271 + MLT1E1 LTR MaLR 1 654 0 1058 200 77 99 chr5 198339889 198340046 -1290104 + L1ME LINE L1 2058 2217 -3998 2097 118 11 0 chr5 198340046 198340357 -1289793 + AluSp SINE Alu 1 314 0 1058 200 77 99 chr5 198340357 198340393 -1289757 + L1ME LINE L1 2217 2252 -3963 2032 124 29 0 chr5 198340393 198340707 -1289443 + AluSx SINE Alu 1 322 0 1058 200 77 99 chr5 198340707 198340792 -1289358 + L1ME LINE L1 2252 2337 -3878 2370 106 0 6 chr5 198340792 198341103 -1289047 + AluSx SINE Alu 1 309 -3 1058 200 77 99 chr5 198341103 198341509 -1288641 + L1ME LINE L1 2337 2669 -3546 2472 62 3 0 chr5 198341510 198341799 -1288351 + AluY SINE Alu 1 290 -21 2177 134 0 0 chr5 198341801 198342139 -1288011 + AluSq SINE Alu 1 313 0 477 258 50 0 chr5 198342139 198342298 -1287852 + L1ME LINE L1 3418 3584 -2631 1854 163 13 10 chr5 198342306 198342613 -1287537 + AluJb SINE Alu 1 308 -4 3818 204 58 52 chr5 198342613 198343173 -1286977 + L1MB5 LINE L1 4152 4707 -1536 1798 118 76 4 chr5 198343173 198343473 -1286677 + AluSx SINE Alu 1 319 0 3818 204 58 52 chr5 198343473 198344911 -1285239 + L1MB5 LINE L1 4707 6161 -82 3434 229 82 52 chr5 198344905 198345158 -1284992 + L1ME LINE L1 3915 4159 -2076 * 1432 95 27 9 chr5 198345158 198345379 -1284771 - L1PA16 LINE L1 0 6166 5942 3434 229 82 52 chr5 198345379 198346139 -1284011 + L1ME LINE L1 4159 4894 -1341 2468 83 0 7 chr5 198346139 198346440 -1283710 + AluSq SINE Alu 11 309 -4 3434 229 82 52 chr5 198346440 198346558 -1283592 + L1ME LINE L1 4894 5007 -1228 1626 166 43 30 chr5 198346558 198346697 -1283453 + AluJo SINE Alu 1 137 -175 2587 27 0 10 chr5 198346697 198347019 -1283131 + AluY SINE Alu 1 319 0 1626 166 43 30 chr5 198347019 198347179 -1282971 + AluJo SINE Alu 137 305 -7 3434 229 82 52 chr5 198347179 198347844 -1282306 + L1ME LINE L1 5007 5770 -465 2581 50 0 0 chr5 198347844 198348144 -1282006 - AluY SINE Alu -11 300 1 3434 229 82 52 chr5 198348144 198348212 -1281938 + L1ME LINE L1 5770 5834 -401 1756 228 89 10 chr5 198348215 198348697 -1281453 - MLT1E1 LTR MaLR 0 654 135 230 240 42 52 chr5 198348746 198348842 -1281308 + L1ME LINE L1 5857 5951 -282 910 208 122 36 chr5 198348969 198349223 -1280927 + Charlie5 DNA MER1_type 2234 2465 -159 2481 81 0 7 chr5 198349223 198349533 -1280617 - AluY SINE Alu -3 308 1 2595 62 0 0 chr5 198349535 198349842 -1280308 - AluY SINE Alu -4 307 1 910 208 122 36 chr5 198349842 198349944 -1280206 + Charlie5 DNA MER1_type 2465 2624 0 345 266 35 105 chr5 198349978 198350320 -1279830 + L1MC5 LINE L1 7371 7688 -273 225 0 0 0 chr5 198350490 198350515 -1279635 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2636 38 0 16 chr5 198351970 198352283 -1277867 + AluY SINE Alu 1 308 -3 598 168 52 52 chr5 198352421 198352576 -1277574 - L1MA7 LINE L1 -1 6290 6136 * 679 273 12 93 chr5 198352550 198352709 -1277441 - L1M4 LINE L1 -2542 3604 3434 2317 106 10 3 chr5 198352709 198353020 -1277130 + AluSq SINE Alu 1 313 0 679 273 12 93 chr5 198353020 198353292 -1276858 - L1M4 LINE L1 -2712 3434 3208 284 244 74 0 chr5 198354050 198354165 -1275985 + MIR SINE MIR 17 147 -61 832 206 131 70 chr5 198354912 198355256 -1274894 - MLT1A1 LTR MaLR 0 365 1 238 279 147 21 chr5 198355686 198355876 -1274274 + L1MC4 LINE L1 7461 7674 -368 345 197 0 0 chr5 198356146 198356217 -1273933 + CT-rich Low_complexity Low_complexity 1 71 0 420 243 97 0 chr5 198356218 198356321 -1273829 - FLAM_C SINE Alu -19 114 2 2239 105 6 35 chr5 198356472 198356787 -1273363 + AluSg SINE Alu 1 306 -4 1138 146 6 0 chr5 198357349 198357520 -1272630 + FRAM SINE Alu 1 169 -7 1556 159 105 9 chr5 198358052 198358385 -1271765 + MLT1A1 LTR MaLR 1 365 0 378 293 102 30 chr5 198358730 198359102 -1271048 + HAL1b LINE L1 198 596 -752 2580 40 10 0 chr5 198359102 198359400 -1270750 - AluY SINE Alu -10 301 1 1528 246 101 80 chr5 198359514 198360090 -1270060 + MLT1E LTR MaLR 6 593 0 2319 99 7 0 chr5 198360111 198360433 -1269717 + AluSx SINE Alu 1 324 0 516 204 11 0 chr5 198360433 198360526 -1269624 + Tigger2 DNA MER2_type 2615 2708 -10 1169 173 29 21 chr5 198360528 198360771 -1269379 - L1M4 LINE L1 -371 5813 5569 249 186 0 0 chr5 198360770 198360813 -1269337 + L1MC4a LINE L1 3786 3828 -2318 * 496 294 141 39 chr5 198360871 198361018 -1269132 + L1MC4a LINE L1 3833 3964 -2182 311 0 0 25 chr5 198361018 198361058 -1269092 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 496 294 141 39 chr5 198361058 198361293 -1268857 + L1MC4a LINE L1 3964 4174 -1972 2103 139 3 0 chr5 198361293 198361610 -1268540 + AluSx SINE Alu 1 312 0 496 294 141 39 chr5 198361610 198361921 -1268229 + L1MC4a LINE L1 4174 4598 -1548 314 51 0 0 chr5 198362033 198362072 -1268078 + MER31B LTR ERV1 352 390 -76 290 149 0 0 chr5 198362044 198362091 -1268059 + MER67D LTR ERV1 432 478 -36 * 2032 120 0 24 chr5 198362091 198362420 -1267730 - AluSx SINE Alu 0 322 1 244 346 31 0 chr5 198362483 198362613 -1267537 + L1MC4a LINE L1 4791 4924 -1222 1079 244 71 24 chr5 198362751 198363239 -1266911 + L1MC4a LINE L1 5378 5923 -1885 632 206 157 38 chr5 198363254 198363521 -1266629 + L1MC4a LINE L1 5963 6261 -1547 230 306 9 19 chr5 198363583 198363691 -1266459 + L1MC4a LINE L1 6400 6506 -1302 303 192 99 15 chr5 198363788 198363922 -1266228 + L1MC5 LINE L1 6720 6963 -1079 186 111 0 0 chr5 198364424 198364451 -1265699 + L2 LINE L2 3270 3296 -17 195 221 12 12 chr5 198365049 198365107 -1265043 - MIR SINE MIR -116 146 90 210 247 54 24 chr5 198365232 198365398 -1264752 + C-rich Low_complexity Low_complexity 2 172 0 39 38 0 0 chr5 198365485 198365538 -1264612 + GC_rich Low_complexity Low_complexity 1 53 0 1803 131 232 54 chr5 198366186 198366288 -1263862 - LTR12 LTR ERV1 -234 480 397 1539 88 0 9 chr5 198366288 198366505 -1263645 + AluY SINE Alu 97 311 0 1803 131 232 54 chr5 198366505 198366807 -1263343 - LTR12 LTR ERV1 -317 397 4 370 315 74 12 chr5 198366815 198366977 -1263173 - MLT1K LTR MaLR -4 584 413 214 257 40 50 chr5 198367227 198367328 -1262822 - MIR3 SINE MIR -27 181 82 516 325 141 26 chr5 198368399 198368852 -1261298 - L2 LINE L2 -3 3310 2806 397 269 28 21 chr5 198369829 198369974 -1260176 + (TG)n Simple_repeat Simple_repeat 2 147 0 392 181 33 40 chr5 198369991 198370453 -1259697 + (TG)n Simple_repeat Simple_repeat 1 458 0 208 149 27 40 chr5 198370492 198370566 -1259584 + (TG)n Simple_repeat Simple_repeat 2 74 0 219 319 101 7 chr5 198371574 198371712 -1258438 - MER5A DNA MER1_type -4 185 35 2097 181 105 19 chr5 198371776 198372241 -1257909 + MLT1D LTR MaLR 1 505 0 277 331 38 25 chr5 198372405 198372562 -1257588 + MER5A DNA MER1_type 31 189 0 3240 236 72 13 chr5 198373013 198373380 -1256770 + MER45B DNA AcHobo 86 430 -1151 9719 191 38 4 chr5 198373380 198373641 -1256509 - L1PA15 LINE L1 0 6165 5914 2169 104 0 7 chr5 198373641 198373939 -1256211 + AluSg SINE Alu 1 296 -14 2316 65 0 3 chr5 198373939 198374260 -1255890 + AluY SINE Alu 1 320 0 9719 191 38 4 chr5 198374260 198376674 -1253476 - L1PA15 LINE L1 -250 5915 3426 3240 236 72 13 chr5 198376674 198376842 -1253308 + MER45B DNA AcHobo 430 587 -994 1820 139 64 52 chr5 198376842 198377084 -1253066 - MER7A DNA MER2_type -2692 346 99 1768 176 0 0 chr5 198377084 198377368 -1252782 - AluJo SINE Alu -28 284 1 1820 139 64 52 chr5 198377368 198377469 -1252681 - MER7A DNA MER2_type -2939 99 1 3240 236 72 13 chr5 198377469 198377834 -1252316 + MER45B DNA AcHobo 587 1040 0 2185 87 0 0 chr5 198377894 198378181 -1251969 + AluSq SINE Alu 15 301 -12 386 236 306 0 chr5 198378439 198378596 -1251554 + LTR50 LTR ERVL 2 206 -589 456 258 153 19 chr5 198378717 198378985 -1251165 + LTR50 LTR ERVL 481 784 -11 1488 202 54 52 chr5 198379728 198379795 -1250355 - MLT1B LTR MaLR -2 388 323 2481 62 0 0 chr5 198379795 198380099 -1250051 - AluY SINE Alu -7 304 1 1488 202 54 52 chr5 198380099 198380418 -1249732 - MLT1B LTR MaLR -67 323 1 770 244 60 12 chr5 198381285 198381455 -1248695 + MER96B DNA MER1_type? 8 168 -249 2127 85 7 3 chr5 198381455 198381748 -1248402 - AluSg SINE Alu -16 294 1 770 244 60 12 chr5 198381748 198381921 -1248229 + MER96B DNA MER1_type? 168 415 -2 2097 107 20 0 chr5 198381954 198382253 -1247897 + AluSx SINE Alu 5 309 -3 731 186 37 32 chr5 198382283 198382471 -1247679 + L1M4 LINE L1 5593 5781 -403 4166 177 89 8 chr5 198382472 198383269 -1246881 + MER21B LTR ERV1 1 862 -1 2168 108 0 19 chr5 198383600 198383916 -1246234 - AluSx SINE Alu -2 310 1 215 339 0 0 chr5 198383917 198383976 -1246174 - MIR SINE MIR -58 150 92 1609 182 10 3 chr5 198384130 198384427 -1245723 + AluJo SINE Alu 1 299 -13 2459 57 3 0 chr5 198384979 198385279 -1244871 + AluSp SINE Alu 1 301 -12 23 78 0 0 chr5 198385841 198385892 -1244258 + AT_rich Low_complexity Low_complexity 1 51 0 850 144 8 0 chr5 198386180 198386312 -1243838 + FLAM_C SINE Alu 1 133 0 249 220 0 0 chr5 198386514 198386564 -1243586 + MLT1L LTR MaLR 558 607 -8 1927 251 180 17 chr5 198386772 198387421 -1242729 - MER21B LTR ERV1 -107 756 2 734 297 48 81 chr5 198387421 198387837 -1242313 + MLT1K LTR MaLR 85 486 -102 193 242 258 0 chr5 198388446 198388512 -1241638 + L2 LINE L2 3231 3313 0 2249 91 0 10 chr5 198388701 198389009 -1241141 - AluSq SINE Alu -7 306 2 1579 163 35 42 chr5 198389082 198389395 -1240755 - AluJo SINE Alu -1 311 1 608 219 26 33 chr5 198389396 198389547 -1240603 - LTR34 LTR ERV1 -546 153 4 290 310 147 5 chr5 198389609 198389793 -1240357 - L1ME4a LINE L1 -225 5896 5687 5122 103 3 6 chr5 198390398 198391088 -1239062 + LTR12 LTR ERV1 1 688 0 278 308 68 8 chr5 198391581 198391713 -1238437 + MIR SINE MIR 16 153 -63 644 215 40 28 chr5 198392489 198392666 -1237484 - MLT1A1 LTR MaLR -186 179 1 4243 264 42 20 chr5 198392666 198393466 -1236684 + L1MC/D LINE L1 3644 4425 -1721 2369 48 0 3 chr5 198393466 198393755 -1236395 + AluY SINE Alu 2 289 -22 4243 264 42 20 chr5 198393755 198394152 -1235998 + L1MC/D LINE L1 4425 4879 -1267 225 0 0 0 chr5 198394152 198394177 -1235973 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4243 264 42 20 chr5 198394177 198394408 -1235742 + L1MC/D LINE L1 4879 5104 -1042 379 194 31 61 chr5 198394384 198394482 -1235668 + L1MC/D LINE L1 5585 5679 -680 * 500 231 0 0 chr5 198394530 198394634 -1235516 + L1M4 LINE L1 4744 4847 -1299 186 346 0 12 chr5 198396974 198397055 -1233095 + L2 LINE L2 2913 2992 -280 1186 212 125 9 chr5 198397962 198398297 -1231853 - MLT1A2 LTR MaLR 0 374 1 222 345 127 18 chr5 198399644 198399809 -1230341 - L2 LINE L2 -451 2863 2681 1819 128 10 10 chr5 198400105 198400402 -1229748 + AluSx SINE Alu 3 299 -13 305 98 0 20 chr5 198400402 198400453 -1229697 + (GGGA)n Simple_repeat Simple_repeat 1 50 0 544 339 119 32 chr5 198400663 198401099 -1229051 - L2 LINE L2 -610 2704 2231 21 0 0 0 chr5 198401589 198401610 -1228540 + AT_rich Low_complexity Low_complexity 1 21 0 297 323 82 15 chr5 198401841 198402036 -1228114 - HAL1 LINE L1 -20 2487 2280 311 343 112 18 chr5 198402126 198402295 -1227855 - HAL1b LINE L1 -418 930 746 264 181 0 83 chr5 198402856 198402928 -1227222 - L1ME LINE L1 -304 5817 5765 2243 101 0 0 chr5 198402972 198403269 -1226881 + AluY SINE Alu 1 297 -14 288 307 43 0 chr5 198403283 198403446 -1226704 + MARNA DNA Mariner 191 360 -226 2497 101 8 11 chr5 198403583 198403939 -1226211 + THE1A LTR MaLR 1 355 0 981 155 0 135 chr5 198404039 198404099 -1226051 + AluJo SINE Alu 87 153 -159 1746 86 19 4 chr5 198404099 198404355 -1225795 + AluSp SINE Alu 53 312 -1 981 155 0 135 chr5 198404355 198404539 -1225611 + AluJo SINE Alu 153 298 -14 192 328 45 0 chr5 198404554 198404621 -1225529 - L3 LINE CR1 -2 1575 1506 234 352 66 25 chr5 198404648 198404844 -1225306 - L3 LINE CR1 -647 930 727 286 264 132 28 chr5 198404901 198405083 -1225067 - L2 LINE L2 -1480 1834 1634 21 0 0 0 chr5 198405123 198405144 -1225006 + AT_rich Low_complexity Low_complexity 1 21 0 271 267 23 99 chr5 198406705 198406836 -1223314 + L2 LINE L2 3188 3308 -5 279 246 69 14 chr5 198407111 198407227 -1222923 - MIR SINE MIR -7 201 82 229 224 145 13 chr5 198407640 198407716 -1222434 + L2 LINE L2 3182 3267 -5 1997 79 26 40 chr5 198408552 198408856 -1221294 - AluSx SINE Alu -12 300 1 227 246 175 0 chr5 198408944 198409001 -1221149 + MER58A DNA MER1_type 7 73 -34 5224 214 42 20 chr5 198409065 198409530 -1220620 - L1M4b LINE L1 -5585 1274 821 1847 152 7 3 chr5 198409530 198409826 -1220324 - AluSx SINE Alu -15 297 1 5224 214 42 20 chr5 198409826 198410504 -1219646 - L1M4b LINE L1 -6038 821 101 2335 62 7 13 chr5 198410504 198410811 -1219339 + AluSg SINE Alu 1 305 -5 5224 214 42 20 chr5 198410811 198410872 -1219278 - L1M4b LINE L1 -6758 101 43 1775 145 22 0 chr5 198411244 198411520 -1218630 - AluJo SINE Alu -30 282 1 272 267 76 0 chr5 198411710 198411815 -1218335 - HAL1 LINE L1 -701 1806 1694 979 261 97 67 chr5 198411910 198412148 -1218002 - L1MC4a LINE L1 -1959 5849 5620 2194 93 0 7 chr5 198412148 198412450 -1217700 - AluSq SINE Alu -13 300 1 979 261 97 67 chr5 198412450 198412655 -1217495 - L1MC4a LINE L1 -2188 5620 5385 2438 71 0 0 chr5 198412655 198412966 -1217184 - AluY SINE Alu 0 311 1 979 261 97 67 chr5 198412966 198413058 -1217092 - L1MC4a LINE L1 -2423 5385 5297 659 333 87 3 chr5 198413058 198413367 -1216783 + L2 LINE L2 1823 2157 -1157 1784 164 16 19 chr5 198413553 198413864 -1216286 - AluJo SINE Alu -2 310 1 682 148 0 41 chr5 198413978 198414147 -1216003 + (TTCC)n Simple_repeat Simple_repeat 4 165 0 2000 224 61 84 chr5 198414440 198414623 -1215527 + MER21B LTR ERV1 98 284 -579 2101 104 3 0 chr5 198414623 198414912 -1215238 + AluSx SINE Alu 5 294 -18 2000 224 61 84 chr5 198414912 198415384 -1214766 + MER21B LTR ERV1 284 738 -125 543 252 66 62 chr5 198415433 198415675 -1214475 + L1ME3A LINE L1 5920 6162 -8 1100 126 171 58 chr5 198415735 198415908 -1214242 + L1MB2 LINE L1 5827 5979 -192 2279 102 3 20 chr5 198415908 198416213 -1213937 - AluSx SINE Alu -12 300 1 1100 126 171 58 chr5 198416213 198416348 -1213802 + L1MB2 LINE L1 5979 6170 -1 286 327 107 81 chr5 198416457 198416867 -1213283 + L2 LINE L2 2848 3268 -4 1256 189 8 62 chr5 198417177 198417653 -1212497 + MLT1D LTR MaLR 7 505 0 449 369 66 33 chr5 198417655 198417929 -1212221 + L3 LINE CR1 342 624 -953 261 227 21 135 chr5 198418115 198418159 -1211991 + L3 LINE CR1 651 698 -879 2410 45 7 7 chr5 198418159 198418447 -1211703 + AluY SINE Alu 20 307 -4 261 227 21 135 chr5 198418447 198418543 -1211607 + L3 LINE CR1 698 775 -802 274 347 168 33 chr5 198418555 198418749 -1211401 + L3 LINE CR1 879 1045 -532 1500 224 77 32 chr5 198418749 198419192 -1210958 - MLT1C LTR MaLR 0 467 5 1957 155 21 51 chr5 198419193 198419409 -1210741 - MLT1A1 LTR MaLR -2 363 161 2241 95 0 26 chr5 198419409 198419713 -1210437 - AluSc SINE Alu -13 296 1 1957 155 21 51 chr5 198419713 198419870 -1210280 - MLT1A1 LTR MaLR -204 161 1 274 347 168 33 chr5 198419870 198420201 -1209949 + L3 LINE CR1 1044 1566 -11 2505 80 0 6 chr5 198420732 198421043 -1209107 + AluY SINE Alu 1 309 -2 304 208 52 39 chr5 198421058 198421135 -1209015 + L1ME3A LINE L1 757 834 -5236 599 221 57 68 chr5 198421143 198421423 -1208727 + L1ME3A LINE L1 5251 5527 -569 1891 186 31 14 chr5 198421423 198421843 -1208307 + MLT1E2 LTR MaLR 1 427 -199 227 324 38 29 chr5 198421868 198421973 -1208177 + MIR SINE MIR 109 214 -48 458 300 70 53 chr5 198422099 198422386 -1207764 - L1MDa LINE L1 -2839 3701 3385 392 311 193 24 chr5 198423194 198423570 -1206580 - L1MDa LINE L1 -3216 3324 2887 240 225 22 0 chr5 198423678 198423767 -1206383 - L1MDa LINE L1 -3967 2573 2483 338 118 0 0 chr5 198423776 198423827 -1206323 - U2 snRNA snRNA -136 52 2 2477 71 7 0 chr5 198424284 198424580 -1205570 - AluY SINE Alu -13 298 1 362 136 291 0 chr5 198424675 198424778 -1205372 + L1MC4 LINE L1 7910 8042 0 3086 108 4 11 chr5 198425406 198425861 -1204289 - MER1A DNA MER1_type 0 529 78 321 263 71 9 chr5 198426254 198426385 -1203765 - MIR SINE MIR -19 189 40 376 223 0 53 chr5 198426418 198426512 -1203638 + MER63 DNA MER1_type 39 753 -309 323 125 0 0 chr5 198426509 198426557 -1203593 + MER63 DNA MER1_type 978 1025 -37 * 294 232 63 0 chr5 198426617 198426712 -1203438 + MER113 DNA MER1_type? 16 116 -405 24 0 0 0 chr5 198426784 198426808 -1203342 + AT_rich Low_complexity Low_complexity 1 24 0 2332 95 0 3 chr5 198426951 198427246 -1202904 - AluSx SINE Alu -18 294 1 959 237 95 26 chr5 198427607 198427987 -1202163 + L1ME3A LINE L1 5505 5910 -186 988 192 6 0 chr5 198427987 198428154 -1201996 + FRAM SINE Alu 1 166 -10 394 267 40 20 chr5 198428178 198428328 -1201822 + L1ME3A LINE L1 5944 6096 -8 3781 138 52 63 chr5 198429192 198430019 -1200131 + L1MB3 LINE L1 5357 6174 -9 395 252 62 70 chr5 198430019 198430277 -1199873 + MER113 DNA MER1_type? 129 384 -137 23 0 0 0 chr5 198431072 198431095 -1199055 + GC_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr5 198431305 198431341 -1198809 + GC_rich Low_complexity Low_complexity 1 36 0 54 73 0 0 chr5 198431404 198431514 -1198636 + GC_rich Low_complexity Low_complexity 1 110 0 23 0 0 0 chr5 198431778 198431801 -1198349 + GC_rich Low_complexity Low_complexity 1 23 0 1602 169 43 6 chr5 198432160 198432486 -1197664 - MER1B DNA MER1_type -1 338 1 2401 74 13 0 chr5 198432914 198433213 -1196937 + AluSg SINE Alu 1 303 -7 313 292 42 8 chr5 198433357 198433477 -1196673 + MER115 DNA AcHobo 2 125 -568 1875 116 4 0 chr5 198483500 198483798 -1146352 + AluSx SINE Alu 25 323 0 234 207 17 35 chr5 198483945 198484003 -1146147 - MLT1H1 LTR MaLR -91 499 443 370 294 27 30 chr5 198484169 198484425 -1145725 - MLT1H1 LTR MaLR -281 274 20 1915 98 3 48 chr5 198484745 198485064 -1145086 - AluSg SINE Alu 0 306 1 2316 106 0 0 chr5 198485064 198485376 -1144774 - AluSx SINE Alu 0 312 1 414 308 41 6 chr5 198485382 198485551 -1144599 + MER90 LTR ERV1 296 470 -144 201 175 0 0 chr5 198486277 198486317 -1143833 + T-rich Low_complexity Low_complexity 1 40 0 1973 113 52 0 chr5 198486346 198486637 -1143513 - AluSq SINE Alu -7 306 1 1961 119 6 42 chr5 198486637 198486949 -1143201 - AluSg SINE Alu -9 301 1 889 159 0 0 chr5 198486962 198487094 -1143056 - FLAM_C SINE Alu 0 133 2 454 274 24 0 chr5 198487128 198487252 -1142898 - MER68 LTR ERV1 0 562 436 2083 60 0 19 chr5 198487274 198487543 -1142607 + AluY SINE Alu 40 303 -8 261 333 149 12 chr5 198487585 198487753 -1142397 + MIR SINE MIR 10 200 -62 1907 99 81 3 chr5 198487757 198488040 -1142110 + AluSx SINE Alu 1 305 -7 219 232 18 0 chr5 198488757 198488813 -1141337 + MIR SINE MIR 90 146 -62 320 292 52 19 chr5 198488831 198488985 -1141165 + Charlie8 DNA MER1_type 1 159 -2258 218 286 141 81 chr5 198489780 198490063 -1140087 + L2 LINE L2 2951 3250 -22 2356 70 3 10 chr5 198491192 198491505 -1138645 - AluY SINE Alu 0 311 1 25 40 0 20 chr5 198491510 198491540 -1138610 + AT_rich Low_complexity Low_complexity 1 31 -18 2525 51 0 3 chr5 198491540 198491852 -1138298 - AluY SINE Alu 0 311 1 25 40 0 20 chr5 198491852 198491871 -1138279 + AT_rich Low_complexity Low_complexity 31 49 0 1773 172 0 7 chr5 198491904 198492206 -1137944 - AluJb SINE Alu -9 303 4 183 42 0 0 chr5 198492247 198492271 -1137879 + (TCTTG)n Simple_repeat Simple_repeat 2 25 0 2123 92 0 7 chr5 198492271 198492553 -1137597 - AluSc SINE Alu -27 282 3 887 116 47 0 chr5 198492555 198492684 -1137466 - AluSq/x SINE Alu -177 135 1 561 228 79 35 chr5 198492691 198492893 -1137257 - L1ME3 LINE L1 -60 6102 5892 2192 95 3 20 chr5 198492919 198493225 -1136925 - AluSx SINE Alu -11 301 1 402 204 92 0 chr5 198493229 198493327 -1136823 - L1ME3 LINE L1 -501 5663 5557 2280 94 0 3 chr5 198493327 198493625 -1136525 - AluY SINE Alu -14 297 1 415 165 0 0 chr5 198493625 198493704 -1136446 - L1 LINE L1 -1227 4919 4841 2207 90 21 0 chr5 198493704 198493994 -1136156 - AluSg SINE Alu -14 296 1 540 227 45 38 chr5 198493996 198494415 -1135735 - L1 LINE L1 -1669 4477 3952 212 250 21 52 chr5 198494527 198494623 -1135527 + CT-rich Low_complexity Low_complexity 1 93 0 * 302 336 0 40 chr5 198494569 198494876 -1135274 + C-rich Low_complexity Low_complexity 1 294 0 1785 90 56 8 chr5 198495128 198495396 -1134754 - AluY SINE Alu -30 281 1 1911 113 7 20 chr5 198495403 198495705 -1134445 - AluSq SINE Alu -12 301 4 1804 158 7 3 chr5 198495710 198496014 -1134136 - AluJo SINE Alu -5 307 3 586 265 115 31 chr5 198496238 198496306 -1133844 + MLT1J LTR MaLR 156 217 -294 1814 104 8 4 chr5 198496306 198496565 -1133585 - AluSc SINE Alu -49 260 1 586 265 115 31 chr5 198496565 198496783 -1133367 + MLT1J LTR MaLR 217 466 -45 468 273 45 6 chr5 198497727 198497903 -1132247 - MLT1K LTR MaLR -8 580 398 184 346 10 10 chr5 198498764 198498865 -1131285 - MIR3 SINE MIR -9 199 99 297 289 132 0 chr5 198499210 198499324 -1130826 - MIR SINE MIR -50 212 84 529 316 164 23 chr5 198500207 198500634 -1129516 - L2 LINE L2 0 3313 2827 806 240 124 69 chr5 198500713 198501150 -1129000 + MLT1C LTR MaLR 6 466 -1 764 246 82 25 chr5 198501258 198501575 -1128575 + MER113 DNA MER1_type? 46 380 -141 257 228 63 0 chr5 198502499 198502578 -1127572 + LTR33 LTR ERVL 382 465 -56 1359 169 54 3 chr5 198502581 198502876 -1127274 + L1MB1 LINE L1 5817 6126 -42 1139 134 0 0 chr5 198502881 198503045 -1127105 + AluSg/x SINE Alu 127 290 -20 1042 179 38 5 chr5 198503050 198503262 -1126888 + L1MA10 LINE L1 6116 6334 0 2344 49 0 0 chr5 198503569 198503854 -1126296 - AluY SINE Alu -3 308 24 181 222 0 0 chr5 198503867 198503903 -1126247 + MER5C DNA MER1_type 288 323 -1 270 376 16 0 chr5 198504961 198505150 -1125000 - MERVL LTR ERVL -1457 4028 3837 766 246 138 5 chr5 198505353 198505548 -1124602 + MER58A DNA MER1_type 1 221 -3 604 286 67 17 chr5 198505638 198506087 -1124063 + LTR33 LTR ERVL 1 507 -14 1684 179 10 3 chr5 198506103 198506400 -1123750 - AluJo SINE Alu -1 311 13 392 287 26 9 chr5 198506576 198506691 -1123459 - MER94 DNA DNA -17 117 1 204 167 24 0 chr5 198506885 198506927 -1123223 - L2 LINE L2 -51 3262 3220 385 314 159 37 chr5 198506965 198507078 -1123072 - L1M4 LINE L1 -3104 3042 2944 2360 72 3 0 chr5 198507078 198507382 -1122768 - AluY SINE Alu -6 305 1 385 314 159 37 chr5 198507382 198507444 -1122706 - L1M4 LINE L1 -3202 2944 2891 2322 74 3 13 chr5 198507444 198507755 -1122395 - AluSc SINE Alu 0 309 2 385 314 159 37 chr5 198507755 198507849 -1122301 - L1M4 LINE L1 -3255 2891 2739 371 286 60 22 chr5 198509491 198509688 -1120462 - MIR3 SINE MIR -19 243 28 188 275 101 51 chr5 198509752 198509890 -1120260 + L2 LINE L2 2246 2390 -924 2187 104 0 7 chr5 198510354 198510652 -1119498 + AluSg SINE Alu 1 296 -14 183 42 0 0 chr5 198510718 198510742 -1119408 + (CACCC)n Simple_repeat Simple_repeat 5 28 0 819 288 111 3 chr5 198510775 198511091 -1119059 + MLT1K LTR MaLR 197 546 -42 2477 40 7 3 chr5 198511405 198511706 -1118444 - AluY SINE Alu -9 302 1 364 234 10 1 chr5 198512519 198512615 -1117535 + L1MB7 LINE L1 6031 6127 -53 575 224 30 0 chr5 198512617 198512751 -1117399 - L1MA9 LINE L1 0 6312 6175 313 237 215 0 chr5 198512856 198512991 -1117159 - L1MA9 LINE L1 -148 6164 6001 386 111 16 0 chr5 198512991 198513054 -1117096 + L1MB8 LINE L1 6114 6177 -1 570 254 136 23 chr5 198513147 198513367 -1116783 - L1ME LINE L1 -310 5811 5555 1751 127 67 0 chr5 198513367 198513635 -1116515 + AluSx SINE Alu 24 309 -3 570 254 136 23 chr5 198513635 198513678 -1116472 - L1ME LINE L1 -566 5555 5518 252 316 47 19 chr5 198514069 198514281 -1115869 + L1MC5 LINE L1 7516 7733 -228 1012 108 12 141 chr5 198514281 198514400 -1115750 - Tigger1 DNA MER2_type 0 2418 2285 2136 118 0 3 chr5 198514400 198514704 -1115446 + AluSx SINE Alu 1 303 -9 1012 108 12 141 chr5 198514704 198514742 -1115408 - Tigger1 DNA MER2_type -133 2285 2244 2141 95 3 0 chr5 198514742 198515025 -1115125 - AluSg SINE Alu -26 284 1 1012 108 12 141 chr5 198515025 198515115 -1115035 - Tigger1 DNA MER2_type -174 2244 2202 748 164 7 20 chr5 198515165 198515317 -1114833 - Tigger1 DNA MER2_type -2268 150 1 360 286 101 0 chr5 198515317 198515495 -1114655 + L1MC5 LINE L1 7732 7927 -34 1847 130 0 4 chr5 198516257 198516526 -1113624 + AluJb SINE Alu 1 268 -44 299 301 32 66 chr5 198516574 198516888 -1113262 - MLT1K LTR MaLR -181 407 38 2241 88 0 3 chr5 198517550 198517844 -1112306 - AluSg1 SINE Alu -16 293 1 483 211 19 0 chr5 198517908 198518012 -1112138 + MER81 DNA DNA 2 107 -7 475 244 89 6 chr5 198518198 198518366 -1111784 - LTR33 LTR ERVL -317 204 23 2326 38 7 14 chr5 198518954 198519243 -1110907 + AluY SINE Alu 1 287 -24 411 189 14 101 chr5 198519377 198519525 -1110625 + MER58C DNA MER1_type 27 161 -54 834 166 94 72 chr5 198519980 198520257 -1109893 + LTR12 LTR ERV1 1 283 -431 233 270 0 0 chr5 198520258 198520332 -1109818 + LTR30 LTR ERV1 547 620 -102 696 164 31 0 chr5 198520332 198520460 -1109690 + LTR12 LTR ERV1 355 486 -228 241 65 0 43 chr5 198520570 198520616 -1109534 + (TTTTC)n Simple_repeat Simple_repeat 3 46 0 2031 131 6 6 chr5 198520624 198520936 -1109214 - AluSx SINE Alu 0 312 1 387 0 0 0 chr5 198521068 198521111 -1109039 + (TG)n Simple_repeat Simple_repeat 2 44 0 266 309 100 0 chr5 198521127 198521237 -1108913 + L2 LINE L2 3151 3271 -1 1651 162 46 12 chr5 198521431 198521776 -1108374 - MLT1A1 LTR MaLR -7 358 2 1704 130 58 11 chr5 198522253 198522529 -1107621 + AluSq SINE Alu 7 295 -18 276 100 0 0 chr5 198522957 198522997 -1107153 + (T)n Simple_repeat Simple_repeat 1 40 0 582 247 83 73 chr5 198524222 198524522 -1105628 - MLT1K LTR MaLR -6 582 280 840 153 40 130 chr5 198524576 198524637 -1105513 - AluJo SINE Alu -109 203 138 1711 156 10 27 chr5 198524637 198524938 -1105212 - AluJb SINE Alu -15 297 2 840 153 40 130 chr5 198524938 198525099 -1105051 - AluJo SINE Alu -174 138 1 253 312 29 94 chr5 198525534 198525810 -1104340 + L2 LINE L2 2994 3251 -21 272 331 45 19 chr5 198526695 198526852 -1103298 - MIR SINE MIR -80 182 22 180 0 0 0 chr5 198528136 198528156 -1101994 + (T)n Simple_repeat Simple_repeat 1 20 0 732 208 182 35 chr5 198529122 198529463 -1100687 - MER113 DNA MER1_type? -98 423 33 190 233 23 0 chr5 198529482 198529525 -1100625 - MIR SINE MIR -57 151 108 402 212 41 27 chr5 198530111 198530257 -1099893 + Charlie8 DNA MER1_type 51 198 -2219 937 239 32 2 chr5 198530704 198530961 -1099189 - MLT1D LTR MaLR 0 505 278 986 193 0 0 chr5 198531172 198531333 -1098817 - FRAM SINE Alu -3 163 3 22 35 0 0 chr5 198531351 198531380 -1098770 + AT_rich Low_complexity Low_complexity 1 29 0 2316 87 3 3 chr5 198531456 198531765 -1098385 + AluSc SINE Alu 1 309 0 601 296 58 5 chr5 198534746 198534952 -1095198 - L2 LINE L2 0 3313 3097 312 320 26 65 chr5 198535366 198535519 -1094631 - MIR SINE MIR -96 166 20 329 264 45 9 chr5 198536546 198536656 -1093494 - L1ME LINE L1 -470 5651 5538 2123 124 0 7 chr5 198537566 198537872 -1092278 - AluSg SINE Alu 0 310 7 979 168 0 6 chr5 198537923 198538090 -1092060 + AluJb SINE Alu 137 302 -10 442 200 52 9 chr5 198538098 198538213 -1091937 + L1MB8 LINE L1 6057 6176 -2 2358 108 76 15 chr5 198538235 198538578 -1091572 - THE1B LTR MaLR 0 364 1 1695 182 26 66 chr5 198539529 198539684 -1090466 + MLT1A1 LTR MaLR 1 161 -204 2353 73 0 10 chr5 198539684 198539986 -1090164 + AluY SINE Alu 1 299 -12 2406 80 3 0 chr5 198539992 198540304 -1089846 + AluSp SINE Alu 1 313 0 1695 182 26 66 chr5 198540304 198540521 -1089629 + MLT1A1 LTR MaLR 166 365 0 2360 76 3 0 chr5 198541097 198541400 -1088750 - AluSx SINE Alu -8 304 1 475 266 0 8 chr5 198542248 198542376 -1087774 + L1MB1 LINE L1 6019 6145 -44 1235 188 90 0 chr5 198542388 198542633 -1087517 - AluJo SINE Alu -45 267 1 609 278 19 51 chr5 198542633 198542849 -1087301 + L1MA10 LINE L1 6126 6334 0 376 384 26 17 chr5 198542922 198543026 -1087124 - L1ME4a LINE L1 -169 5952 5850 2402 70 3 0 chr5 198543026 198543325 -1086825 - AluY SINE Alu -11 300 1 376 384 26 17 chr5 198543325 198543452 -1086698 - L1ME4a LINE L1 -271 5850 5719 407 259 14 27 chr5 198544247 198544394 -1085756 - MER113 DNA MER1_type? -318 203 59 373 278 28 69 chr5 198545276 198545492 -1084658 + MER102b DNA MER1_type 104 310 -31 2502 68 0 0 chr5 198546964 198547275 -1082875 + AluY SINE Alu 1 311 0 197 33 33 0 chr5 198547390 198547420 -1082730 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2142 119 0 19 chr5 198547658 198547976 -1082174 + AluSx SINE Alu 1 312 0 295 342 7 34 chr5 198548006 198548155 -1081995 + HAL1b LINE L1 282 426 -922 292 183 148 70 chr5 198548371 198548513 -1081637 - Charlie8 DNA MER1_type -2228 189 37 219 261 51 116 chr5 198550112 198550164 -1079986 - L2 LINE L2 -1568 1746 1692 2143 118 0 7 chr5 198550164 198550460 -1079690 - AluSx SINE Alu -18 294 1 219 261 51 116 chr5 198550460 198550622 -1079528 - L2 LINE L2 -1622 1692 1546 207 224 0 61 chr5 198551470 198551519 -1078631 + MIR SINE MIR 39 84 -124 306 297 138 14 chr5 198551620 198551758 -1078392 - MIR SINE MIR -62 200 46 325 301 43 62 chr5 198552281 198552490 -1077660 - Charlie8 DNA MER1_type -2137 280 76 563 153 54 0 chr5 198552516 198552627 -1077523 - MER69 DNA AcHobo -3 2523 2407 259 256 162 34 chr5 198552817 198552934 -1077216 - L2 LINE L2 0 3272 3141 211 252 196 0 chr5 198553162 198553269 -1076881 - L2 LINE L2 -20 3252 3125 2086 99 0 7 chr5 198554445 198554755 -1075395 - AluSg SINE Alu 0 308 1 530 277 35 48 chr5 198556541 198556772 -1073378 + Charlie8 DNA MER1_type 53 280 -2137 204 40 0 0 chr5 198556948 198556973 -1073177 + (GA)n Simple_repeat Simple_repeat 2 26 0 1347 78 47 0 chr5 198557441 198557633 -1072517 - AluY SINE Alu 0 311 111 436 326 52 12 chr5 198557852 198558024 -1072126 + L1M4 LINE L1 4365 4543 -1603 654 128 0 37 chr5 198558024 198558133 -1072017 - FLAM_A SINE Alu -6 136 32 2289 46 0 14 chr5 198558254 198558579 -1071571 + AluY SINE Alu 1 321 0 416 338 44 31 chr5 198558739 198558964 -1071186 - MIR SINE MIR -30 232 5 22 0 0 0 chr5 198558980 198559002 -1071148 + AT_rich Low_complexity Low_complexity 1 22 0 2113 99 21 0 chr5 198559566 198559850 -1070300 - AluSx SINE Alu -22 290 1 2465 53 0 0 chr5 198560049 198560350 -1069800 + AluY SINE Alu 1 301 -10 818 138 48 21 chr5 198560444 198560633 -1069517 - L1MC5 LINE L1 -518 7443 7250 656 212 95 8 chr5 198560735 198560976 -1069174 - L1MC5 LINE L1 -725 7236 6975 623 256 57 4 chr5 198560973 198561203 -1068947 + L1MC5 LINE L1 7548 7789 -172 * 460 314 48 54 chr5 198561932 198562353 -1067797 + L2 LINE L2 2636 3132 -181 2635 20 0 0 chr5 198562563 198562863 -1067287 - AluYa5 SINE Alu -11 300 1 236 321 29 51 chr5 198563032 198563169 -1066981 + MIR SINE MIR 69 202 -60 457 312 89 49 chr5 198564646 198564863 -1065287 - L1MC5 LINE L1 -37 7924 7688 2598 39 0 3 chr5 198564863 198565171 -1064979 + AluY SINE Alu 1 307 -4 457 312 89 49 chr5 198565171 198565280 -1064870 - L1MC5 LINE L1 -273 7688 7585 279 260 89 75 chr5 198566036 198566171 -1063979 + MIR SINE MIR 49 191 -55 201 211 0 0 chr5 198566638 198566690 -1063460 + C-rich Low_complexity Low_complexity 4 55 0 258 287 33 16 chr5 198566709 198566721 -1063429 - L1M4c LINE L1 -5347 1037 1027 2536 42 3 0 chr5 198566721 198567031 -1063119 - AluY SINE Alu 0 311 1 258 287 33 16 chr5 198567031 198567140 -1063010 - L1M4c LINE L1 -5357 1027 914 1460 127 64 50 chr5 198567147 198567264 -1062886 + AluJb SINE Alu 6 120 -192 2303 92 0 0 chr5 198567264 198567556 -1062594 + AluSx SINE Alu 1 292 -20 186 43 0 0 chr5 198567559 198567582 -1062568 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1460 127 64 50 chr5 198567582 198567743 -1062407 + AluJb SINE Alu 121 292 -20 326 131 0 101 chr5 198568114 198568312 -1061838 + (TCCC)n Simple_repeat Simple_repeat 1 178 0 621 317 93 26 chr5 198568314 198568778 -1061372 + L2 LINE L2 2819 3313 0 180 273 109 31 chr5 198568933 198569061 -1061089 - L2 LINE L2 -1 3271 3134 2405 211 172 65 chr5 198569381 198569630 -1060520 + Charlie1 DNA MER1_type 1 222 -2539 2371 97 0 0 chr5 198569630 198569928 -1060222 + AluSx SINE Alu 1 298 -14 2405 211 172 65 chr5 198569928 198569943 -1060207 + Charlie1 DNA MER1_type 222 234 -2527 2408 87 0 0 chr5 198569943 198570231 -1059919 + AluSq SINE Alu 6 293 -20 2494 75 0 0 chr5 198570231 198570524 -1059626 + AluY SINE Alu 1 293 -18 2405 211 172 65 chr5 198570524 198570629 -1059521 + Charlie1 DNA MER1_type 234 326 -2435 2172 111 31 0 chr5 198570629 198570917 -1059233 + AluSq SINE Alu 1 297 -16 2405 211 172 65 chr5 198570917 198571169 -1058981 + Charlie1 DNA MER1_type 326 550 -2211 2218 104 0 13 chr5 198571169 198571467 -1058683 + AluSg SINE Alu 1 294 -16 2405 211 172 65 chr5 198571467 198572055 -1058095 + Charlie1 DNA MER1_type 550 2648 -113 2502 84 0 0 chr5 198572055 198572366 -1057784 - AluY SINE Alu 0 311 1 1255 49 0 0 chr5 198572367 198572510 -1057640 - AluYb8 SINE Alu -175 143 1 572 131 14 131 chr5 198572510 198572655 -1057495 + Charlie1 DNA MER1_type 2634 2761 0 258 242 0 45 chr5 198572746 198572812 -1057338 + MIR SINE MIR 108 170 -92 185 0 0 39 chr5 198573170 198573196 -1056954 + (CCCCCA)n Simple_repeat Simple_repeat 6 30 0 230 298 96 10 chr5 198573304 198573408 -1056742 - L2 LINE L2 -24 3248 3136 180 283 100 50 chr5 198573438 198573558 -1056592 - MIR SINE MIR -36 226 101 230 298 96 10 chr5 198573757 198573861 -1056289 + L2 LINE L2 3136 3248 -24 2238 113 0 10 chr5 198574224 198574534 -1055616 + AluSx SINE Alu 6 312 0 1218 248 76 64 chr5 198576066 198576656 -1053494 - MER21B LTR ERV1 -169 694 98 438 303 186 32 chr5 198576872 198577258 -1052892 + L2 LINE L2 2673 3152 -161 2565 44 0 3 chr5 198577258 198577556 -1052594 - AluY SINE Alu -14 297 1 438 303 186 32 chr5 198577556 198577647 -1052503 + L2 LINE L2 3152 3228 -85 2390 81 10 0 chr5 198578199 198578495 -1051655 - AluY SINE Alu -12 299 1 225 250 0 0 chr5 198578663 198578715 -1051435 + L2 LINE L2 3220 3271 -1 1360 231 171 44 chr5 198581621 198581737 -1048413 - HAL1 LINE L1 -628 1879 1779 189 74 0 0 chr5 198581737 198581764 -1048386 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2156 105 4 0 chr5 198581767 198582043 -1048107 - AluSc SINE Alu -32 277 1 1360 231 171 44 chr5 198582043 198582136 -1048014 - HAL1 LINE L1 -729 1778 1698 1902 155 36 25 chr5 198582136 198582497 -1047653 - MLT1A1 LTR MaLR 0 365 1 1360 231 171 44 chr5 198582497 198583008 -1047142 - HAL1 LINE L1 -809 1698 1062 2416 78 3 28 chr5 198583008 198583025 -1047125 - AluY SINE Alu 0 311 295 189 0 0 0 chr5 198583025 198583046 -1047104 + (TA)n Simple_repeat Simple_repeat 2 22 0 2416 78 3 28 chr5 198583046 198583347 -1046803 - AluY SINE Alu -16 295 1 734 182 127 0 chr5 198583349 198583530 -1046620 - L1MC3 LINE L1 -720 7065 6862 255 212 9 0 chr5 198583530 198583649 -1046501 + (TG)n Simple_repeat Simple_repeat 1 120 0 261 0 0 0 chr5 198583729 198583758 -1046392 + (TG)n Simple_repeat Simple_repeat 2 30 0 1131 161 58 5 chr5 198583760 198583983 -1046167 - L1MC3 LINE L1 -929 6856 6622 681 272 165 30 chr5 198584005 198584465 -1045685 - HAL1 LINE L1 -1486 1021 500 204 247 104 13 chr5 198584998 198585075 -1045075 - MIR SINE MIR -137 125 42 2036 121 101 38 chr5 198585195 198585593 -1044557 - MSTC LTR MaLR 0 428 6 2128 130 3 3 chr5 198586267 198586566 -1043584 - AluSq SINE Alu -9 304 6 2462 77 6 6 chr5 198587386 198587698 -1042452 - AluSx SINE Alu 0 312 1 22 56 0 0 chr5 198588300 198588336 -1041814 + GC_rich Low_complexity Low_complexity 1 36 0 198 28 125 28 chr5 198588529 198588601 -1041549 + (CTGTG)n Simple_repeat Simple_repeat 1 79 0 198 71 0 0 chr5 198588671 198588699 -1041451 + (CCCTG)n Simple_repeat Simple_repeat 2 29 0 243 294 92 0 chr5 198589050 198589169 -1040981 + MIR SINE MIR 85 214 -48 943 272 117 32 chr5 198589343 198589780 -1040370 + L2 LINE L2 2840 3313 0 284 297 160 48 chr5 198589993 198590262 -1039888 - L2 LINE L2 -1 3271 2973 1810 158 3 14 chr5 198590415 198590706 -1039444 + AluJo SINE Alu 1 288 -24 182 216 162 27 chr5 198590957 198591031 -1039119 - MIR SINE MIR -131 131 48 356 214 150 64 chr5 198591626 198591813 -1038337 - L1MC5 LINE L1 -30 7931 7729 183 219 0 0 chr5 198591828 198591860 -1038290 + L2 LINE L2 3232 3263 -9 998 229 53 26 chr5 198592090 198592431 -1037719 - L1MC5 LINE L1 -299 7662 7313 412 292 154 72 chr5 198592651 198592983 -1037167 - L2 LINE L2 -9 3263 2905 1826 208 41 107 chr5 198593161 198593771 -1036379 - L1MD2 LINE L1 -18 6224 5655 2667 55 3 0 chr5 198594130 198594440 -1035710 + AluY SINE Alu 1 311 0 2513 64 0 16 chr5 198594464 198594777 -1035373 - AluY SINE Alu -3 308 1 195 100 0 0 chr5 198594779 198594809 -1035341 + (TTA)n Simple_repeat Simple_repeat 2 31 0 796 149 0 8 chr5 198594812 198594933 -1035217 - AluJb SINE Alu -192 120 1 354 220 177 64 chr5 198595282 198595423 -1034727 + MIR SINE MIR 47 203 -59 213 121 0 0 chr5 198595639 198595672 -1034478 + (TG)n Simple_repeat Simple_repeat 2 34 0 378 306 102 34 chr5 198595686 198596069 -1034081 - L1MC4a LINE L1 -1900 5908 5500 28 0 0 0 chr5 198596598 198596626 -1033524 + AT_rich Low_complexity Low_complexity 1 28 0 2165 103 28 0 chr5 198596627 198596918 -1033232 - AluSx SINE Alu -11 301 3 691 266 87 71 chr5 198597118 198597471 -1032679 - MLT1J LTR MaLR -117 338 21 229 224 0 0 chr5 198600354 198600403 -1029747 + T-rich Low_complexity Low_complexity 1 49 0 225 94 0 0 chr5 198600858 198600890 -1029260 + (T)n Simple_repeat Simple_repeat 1 32 0 2479 74 0 3 chr5 198601318 198601616 -1028534 + AluSc SINE Alu 1 297 -12 2461 83 3 0 chr5 198601981 198602283 -1027867 - AluSc SINE Alu -6 303 1 1761 194 141 13 chr5 198603088 198603536 -1026614 + MLT1D LTR MaLR 1 505 0 27 22 0 22 chr5 198603818 198603836 -1026314 + AT_rich Low_complexity Low_complexity 1 18 -26 2335 75 7 3 chr5 198603836 198604129 -1026021 - AluSc SINE Alu -15 294 1 27 22 0 22 chr5 198604129 198604155 -1025995 + AT_rich Low_complexity Low_complexity 18 44 0 24 32 0 0 chr5 198604491 198604522 -1025628 + AT_rich Low_complexity Low_complexity 1 31 0 402 258 30 45 chr5 198604577 198604709 -1025441 + MIR3 SINE MIR 25 154 -54 338 332 82 23 chr5 198605395 198605835 -1024315 + L1ME3A LINE L1 573 1038 -5081 2021 218 36 13 chr5 198605882 198606360 -1023790 - MLT1E2 LTR MaLR -1 625 137 1262 267 116 67 chr5 198606372 198607177 -1022973 + L1ME3A LINE L1 4251 5015 -1138 875 115 0 65 chr5 198607177 198607316 -1022834 + FLAM_C SINE Alu 2 131 -2 1262 267 116 67 chr5 198607316 198608081 -1022069 + L1ME3A LINE L1 5015 5882 -271 423 242 176 48 chr5 198608270 198608497 -1021653 + HAL1 LINE L1 1469 1724 -783 335 365 42 12 chr5 198609258 198609425 -1020725 + HAL1 LINE L1 2205 2376 -131 1393 145 28 0 chr5 198609511 198609766 -1020384 - L1MA8 LINE L1 -3 6288 6027 2000 150 6 31 chr5 198609816 198610136 -1020014 - AluJb SINE Alu 0 312 1 2226 99 34 0 chr5 198611555 198611847 -1018303 - AluY SINE Alu -9 302 1 2429 68 0 0 chr5 198611865 198612159 -1017991 - AluY SINE Alu -17 294 1 1533 94 156 8 chr5 198612581 198612852 -1017298 + AluSg1 SINE Alu 1 307 0 763 214 29 7 chr5 198612915 198613055 -1017095 - AluJb SINE Alu -102 210 68 2655 52 0 3 chr5 198613112 198613422 -1016728 - AluY SINE Alu 0 311 3 232 217 170 9 chr5 198613463 198613569 -1016581 - HAL1b LINE L1 -8 1340 1218 265 290 124 94 chr5 198613688 198613956 -1016194 - L1ME LINE L1 -302 5819 5560 668 184 32 8 chr5 198613956 198614081 -1016069 + FLAM_A SINE Alu 1 128 -5 2209 110 3 13 chr5 198614086 198614387 -1015763 + AluSq SINE Alu 1 298 -15 265 290 124 94 chr5 198614387 198614581 -1015569 - L1ME LINE L1 -564 5557 5337 21 0 0 0 chr5 198614597 198614618 -1015532 + AT_rich Low_complexity Low_complexity 1 21 0 446 359 58 0 chr5 198614733 198614939 -1015211 - L1ME LINE L1 -1044 5102 4885 2215 150 11 21 chr5 198615010 198615389 -1014761 - THE1C LTR MaLR 0 375 1 2200 265 196 30 chr5 198616400 198616699 -1013451 - L2 LINE L2 -1 3312 3064 2631 43 0 3 chr5 198616699 198617002 -1013148 + AluY SINE Alu 1 302 -9 2200 265 196 30 chr5 198617002 198617969 -1012181 - L2 LINE L2 -249 3064 1795 1896 120 16 54 chr5 198617969 198618285 -1011865 + AluSx SINE Alu 1 304 -8 2200 265 196 30 chr5 198618285 198618402 -1011748 - L2 LINE L2 -1518 1795 1699 692 205 45 6 chr5 198618415 198618571 -1011579 - L1MC1 LINE L1 -1 6332 6171 21 0 0 0 chr5 198619034 198619055 -1011095 + AT_rich Low_complexity Low_complexity 1 21 0 389 250 0 9 chr5 198619279 198619391 -1010759 - L1MC4 LINE L1 0 8042 7932 21 36 0 0 chr5 198620343 198620371 -1009779 + AT_rich Low_complexity Low_complexity 1 28 0 2067 108 0 30 chr5 198621655 198621960 -1008190 - AluSg SINE Alu -14 296 1 1822 261 118 64 chr5 198624747 198625665 -1004485 - HAL1 LINE L1 -33 2474 1478 2159 80 3 0 chr5 198625665 198625951 -1004199 - AluY SINE Alu -24 287 1 1822 261 118 64 chr5 198625951 198626206 -1003944 - HAL1 LINE L1 -1029 1478 1238 689 267 141 46 chr5 198626225 198626438 -1003712 - HAL1 LINE L1 -1452 1055 864 2240 108 0 0 chr5 198626438 198626743 -1003407 + AluSq SINE Alu 1 305 -8 689 267 141 46 chr5 198626743 198626941 -1003209 - HAL1 LINE L1 -1643 864 605 292 309 66 6 chr5 198627531 198627712 -1002438 - LTR16B LTR ERVL -272 192 1 851 330 74 30 chr5 198627975 198628582 -1001568 + HERV16 LTR ERVL 2057 2690 -2306 665 199 6 0 chr5 198729184 198729355 -900795 + (TCCA)n Simple_repeat Simple_repeat 2 173 0 2305 64 27 3 chr5 198729382 198729679 -900471 - AluY SINE Alu -7 304 1 219 352 8 8 chr5 198731298 198731426 -898724 + (CA)n Simple_repeat Simple_repeat 1 128 0 297 0 0 0 chr5 198731464 198731497 -898653 + (CA)n Simple_repeat Simple_repeat 1 33 0 2445 67 0 0 chr5 198732606 198732904 -897246 - AluY SINE Alu -13 298 1 180 208 104 0 chr5 198737082 198737130 -893020 - L2 LINE L2 -97 3175 3123 215 295 76 29 chr5 198738662 198738767 -891383 - MIR3 SINE MIR -34 174 65 2276 77 3 7 chr5 198739569 198739869 -890281 + AluSp SINE Alu 1 299 -14 207 69 0 0 chr5 198742089 198742118 -888032 + (GGGA)n Simple_repeat Simple_repeat 2 30 0 25 51 0 0 chr5 198744901 198744940 -885210 + GC_rich Low_complexity Low_complexity 1 39 0 28 29 0 0 chr5 198745104 198745139 -885011 + GC_rich Low_complexity Low_complexity 1 35 0 277 306 27 0 chr5 198747296 198747392 -882758 - MIR SINE MIR -59 149 49 359 153 0 41 chr5 198752922 198753020 -877130 + G-rich Low_complexity Low_complexity 4 97 0 2566 43 0 0 chr5 198753472 198753777 -876373 - AluY SINE Alu -5 306 2 3915 181 45 84 chr5 198755988 198756902 -873248 - LTR13 LTR ERVK 0 954 79 2266 44 7 17 chr5 198756902 198757199 -872951 - AluY SINE Alu -17 294 1 3915 181 45 84 chr5 198757199 198757276 -872874 - LTR13 LTR ERVK -875 79 1 1956 106 12 72 chr5 198757447 198757778 -872372 - AluSx SINE Alu -1 311 1 387 340 115 48 chr5 198759009 198759292 -870858 + L1MDb LINE L1 918 1155 -5254 1542 199 7 14 chr5 198759292 198759588 -870562 + AluJb SINE Alu 1 294 -18 387 340 115 48 chr5 198759588 198759872 -870278 + L1MDb LINE L1 1155 1419 -4990 674 332 103 15 chr5 198759873 198760340 -869810 - L2 LINE L2 -441 2873 2366 1532 160 34 14 chr5 198760527 198760637 -869513 - AluJb SINE Alu -7 305 199 2528 34 0 10 chr5 198760637 198760935 -869215 - AluY SINE Alu -16 295 1 1532 160 34 14 chr5 198760935 198761118 -869032 - AluJb SINE Alu -113 199 6 2006 60 99 3 chr5 198763124 198763406 -866744 - AluSq SINE Alu -4 309 1 235 222 0 0 chr5 198763436 198763481 -866669 - Alu SINE Alu -180 122 78 1025 147 26 0 chr5 198764630 198764786 -865364 - FRAM SINE Alu -6 160 1 1342 183 49 7 chr5 198765317 198765601 -864549 + MLT1A1 LTR MaLR 5 300 -65 252 333 29 23 chr5 198766931 198766999 -863151 + MLT1K LTR MaLR 326 392 -196 2160 96 3 0 chr5 198766999 198767291 -862859 + AluSg SINE Alu 1 293 -17 252 333 29 23 chr5 198767291 198767396 -862754 + MLT1K LTR MaLR 392 500 -88 282 277 0 24 chr5 198769121 198769204 -860946 + MLT1D LTR MaLR 114 194 -311 620 236 0 14 chr5 198769208 198769717 -860433 + (CA)n Simple_repeat Simple_repeat 1 501 0 212 111 22 0 chr5 198769737 198769782 -860368 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 581 234 55 93 chr5 198769765 198770056 -860094 + MLT1D LTR MaLR 188 505 0 2467 226 41 9 chr5 198770673 198771307 -858843 + L1MB3 LINE L1 5485 6138 -45 1263 164 0 52 chr5 198771311 198771449 -858701 + AluJo SINE Alu 1 124 -188 2001 160 7 3 chr5 198771449 198771756 -858394 + AluJb SINE Alu 1 308 -4 1263 164 0 52 chr5 198771756 198771849 -858301 + AluJo SINE Alu 124 220 -92 935 167 0 78 chr5 198775115 198775246 -854904 + AluJb SINE Alu 5 118 -194 2269 73 17 3 chr5 198775246 198775534 -854616 + AluSc SINE Alu 1 292 -17 935 167 0 78 chr5 198775534 198775594 -854556 + AluJb SINE Alu 118 181 -131 222 250 22 33 chr5 198775711 198775803 -854347 + CT-rich Low_complexity Low_complexity 6 96 0 230 259 19 28 chr5 198775957 198776065 -854085 + T-rich Low_complexity Low_complexity 6 112 0 273 218 0 0 chr5 198776079 198776157 -853993 + T-rich Low_complexity Low_complexity 1 78 0 204 170 0 38 chr5 198776200 198776253 -853897 + CT-rich Low_complexity Low_complexity 2 52 0 313 230 40 10 chr5 198776548 198776683 -853467 + CT-rich Low_complexity Low_complexity 1 139 0 472 186 17 0 chr5 198776707 198776825 -853325 + (TGGA)n Simple_repeat Simple_repeat 4 123 0 426 318 74 3 chr5 198777181 198777480 -852670 + L2 LINE L2 511 830 -2484 2159 81 84 0 chr5 198777836 198778121 -852029 + AluSc SINE Alu 1 309 0 2192 110 13 0 chr5 198778295 198778595 -851555 - AluSx SINE Alu -8 304 1 238 253 30 50 chr5 198778597 198778696 -851454 + L2 LINE L2 1686 1782 -1532 385 271 29 71 chr5 198779587 198779757 -850393 + L2 LINE L2 3150 3312 -1 792 200 0 0 chr5 198779777 198779957 -850193 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 975 161 0 0 chr5 198779993 198780173 -849977 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 539 190 11 22 chr5 198780199 198780378 -849772 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 331 267 28 16 chr5 198782523 198782647 -847503 + MIR3 SINE MIR 36 162 -46 2377 93 3 0 chr5 198782692 198782994 -847156 + AluY SINE Alu 1 303 -8 2136 120 10 0 chr5 198784591 198784882 -845268 - AluSg SINE Alu -16 294 1 200 286 0 33 chr5 198788155 198788246 -841904 - MIR SINE MIR -76 132 45 199 232 36 0 chr5 198789140 198789196 -840954 + MIR SINE MIR 88 145 -63 216 0 0 0 chr5 198790393 198790417 -839733 + (CGGGG)n Simple_repeat Simple_repeat 1 24 0 1070 116 71 62 chr5 198790746 198790970 -839180 + AluSg/x SINE Alu 84 309 -3 1924 124 19 50 chr5 198791784 198792107 -838043 - AluSq SINE Alu 0 313 1 1787 174 26 7 chr5 198792117 198792422 -837728 - AluJb SINE Alu -1 311 1 900 220 14 14 chr5 198792439 198792662 -837488 - L1PB4 LINE L1 -9 6147 5925 637 222 111 5 chr5 198792714 198792912 -837238 - L1ME3A LINE L1 -286 5884 5666 644 232 125 58 chr5 198792917 198793100 -837050 - L1ME3A LINE L1 -559 5603 5434 2128 134 3 3 chr5 198793100 198793398 -836752 - AluSx SINE Alu -11 301 4 644 232 125 58 chr5 198793398 198793542 -836608 - L1ME3A LINE L1 -728 5434 5254 455 251 212 28 chr5 198793552 198793965 -836185 - MLT1G1 LTR MaLR -1 554 15 2358 104 0 0 chr5 198794132 198794440 -835710 - AluSx SINE Alu -3 309 2 233 163 0 20 chr5 198794877 198794926 -835224 - L1MEc LINE L1 -4123 2273 2226 548 220 176 28 chr5 198794926 198794972 -835178 - L1MEc LINE L1 -4379 2017 1979 1854 150 73 0 chr5 198794972 198795313 -834837 + MER47A DNA MER2_type 1 366 0 548 220 176 28 chr5 198795313 198795521 -834629 - L1MEc LINE L1 -4417 1979 1725 716 238 0 7 chr5 198795693 198795840 -834310 - FRAM SINE Alu -30 146 1 1309 243 237 23 chr5 198795862 198796549 -833601 - L2 LINE L2 -1436 1878 1045 322 294 106 32 chr5 198796554 198796626 -833524 - L1MC5 LINE L1 -214 7747 7682 1477 158 99 11 chr5 198796626 198796898 -833252 - AluJb SINE Alu -13 299 4 322 294 106 32 chr5 198796898 198797165 -832985 - L1MC5 LINE L1 -279 7682 7383 252 186 139 0 chr5 198797179 198797265 -832885 - L1MB2 LINE L1 -2 6169 6072 * 310 194 39 90 chr5 198797257 198797412 -832738 - L1MC5 LINE L1 -554 7407 7261 1841 137 52 24 chr5 198797492 198797820 -832330 + MER1B DNA MER1_type 1 337 0 658 244 227 44 chr5 198797874 198798037 -832113 - L1MC5 LINE L1 -728 7233 7101 2414 70 0 24 chr5 198798037 198798356 -831794 - AluY SINE Alu 0 311 1 658 244 227 44 chr5 198798356 198798650 -831500 - L1MC5 LINE L1 -860 7101 6692 2183 102 39 0 chr5 198798670 198798955 -831195 + AluSg SINE Alu 1 296 -14 384 297 134 38 chr5 198799717 198799956 -830194 - L3 LINE CR1 -67 1510 1249 211 356 68 20 chr5 198799957 198800103 -830047 - L2 LINE L2 -5 3267 3115 10296 56 13 71 chr5 198800306 198801742 -828408 - SVA Other Other 0 1386 34 4322 143 116 23 chr5 198802229 198803054 -827096 - MER21A LTR ERV1 -6 925 24 279 0 0 0 chr5 198803054 198803085 -827065 + (TA)n Simple_repeat Simple_repeat 1 31 0 1618 179 0 27 chr5 198803143 198803444 -826706 - AluJo SINE Alu -7 305 13 231 133 0 0 chr5 198803478 198803523 -826627 - L1PB4 LINE L1 0 6156 6112 4841 130 50 10 chr5 198804932 198805730 -824420 - L1PB4 LINE L1 -21 6135 5292 2407 77 13 13 chr5 198805730 198806040 -824110 - AluY SINE Alu -1 310 1 4841 130 50 10 chr5 198806040 198806199 -823951 - L1PB4 LINE L1 -864 5292 5141 695 174 114 20 chr5 198806200 198806349 -823801 - FRAM SINE Alu -14 162 1 180 0 0 0 chr5 198806350 198806370 -823780 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1570 168 14 48 chr5 198806370 198806662 -823488 - AluJb SINE Alu -30 282 1 3043 157 62 11 chr5 198806663 198807363 -822787 - L1MC1 LINE L1 -447 5886 5148 567 235 81 8 chr5 198807361 198807621 -822529 - L1MC1 LINE L1 -1538 4608 4330 * 400 242 131 0 chr5 198807679 198807778 -822372 + AluSg SINE Alu 1 112 -188 1123 77 0 0 chr5 198807778 198807921 -822229 - AluYa5 SINE Alu -8 303 161 237 196 0 0 chr5 198808029 198808080 -822070 + (CATATA)n Simple_repeat Simple_repeat 6 56 0 2033 103 32 7 chr5 198808100 198808382 -821768 + AluSq SINE Alu 9 297 -16 1687 176 69 14 chr5 198808383 198808804 -821346 + Charlie5 DNA MER1_type 1594 2037 -575 676 213 0 0 chr5 198808804 198808931 -821219 + FLAM_C SINE Alu 2 128 -15 479 241 130 27 chr5 198808931 198809192 -820958 + Charlie5 DNA MER1_type 2026 2313 -299 589 247 45 6 chr5 198809195 198809373 -820777 + L1M4 LINE L1 2227 2411 -3735 2678 227 163 14 chr5 198809381 198809802 -820348 + L1M4 LINE L1 2461 2818 -3328 2077 99 24 17 chr5 198809802 198810095 -820055 + AluY SINE Alu 1 295 -16 2678 227 163 14 chr5 198810095 198810220 -819930 + L1M4 LINE L1 2818 2923 -3223 2237 115 0 0 chr5 198810220 198810524 -819626 + AluSc SINE Alu 1 304 -5 2678 227 163 14 chr5 198810524 198811301 -818849 + L1M4 LINE L1 2923 4071 -2075 1792 181 29 27 chr5 198811313 198811727 -818423 + L1M4 LINE L1 4517 4931 -1215 705 190 161 0 chr5 198811728 198811902 -818248 - Tigger1 DNA MER2_type 0 2418 2217 294 272 16 16 chr5 198812232 198812357 -817793 + L1MC5 LINE L1 7454 7578 -383 1323 150 124 44 chr5 198812446 198812719 -817431 + AluJo SINE Alu 4 298 -14 1456 234 202 59 chr5 198812795 198813504 -816646 + L2 LINE L2 1045 1918 -1396 743 235 0 7 chr5 198813504 198813657 -816493 + FRAM SINE Alu 1 152 -14 1456 234 202 59 chr5 198813657 198813868 -816282 + L2 LINE L2 1918 2097 -1217 350 288 86 14 chr5 198813879 198814018 -816132 - MIR SINE MIR -112 150 2 2035 123 7 13 chr5 198814046 198814347 -815803 - AluJb SINE Alu -13 299 1 1834 205 98 18 chr5 198816374 198816813 -813337 - MER21B LTR ERV1 -11 852 379 668 172 16 8 chr5 198816816 198816944 -813206 + AluJb SINE Alu 165 293 -19 4333 106 48 75 chr5 198816944 198817188 -812962 + L1PA16 LINE L1 5361 5610 -556 1496 179 55 15 chr5 198817188 198817462 -812688 + AluSq SINE Alu 1 285 -28 4333 106 48 75 chr5 198817462 198818036 -812114 + L1PA16 LINE L1 5610 6157 -9 302 320 0 41 chr5 198818041 198818138 -812012 + L1ME LINE L1 5599 5691 -473 1771 120 9 49 chr5 198818139 198818464 -811686 + LTR24C LTR ERV1 1 312 -323 1106 156 36 0 chr5 198818464 198818631 -811519 + AluSx SINE Alu 2 174 -138 353 259 28 0 chr5 198818832 198818940 -811210 - L1MEc LINE L1 -4720 1887 1777 2237 109 3 0 chr5 198818972 198819265 -810885 - AluSg SINE Alu -16 294 1 2571 77 0 3 chr5 198819271 198819581 -810569 - AluY SINE Alu -2 309 1 423 96 12 36 chr5 198819588 198819671 -810479 - Alu SINE Alu -3 307 227 617 191 44 15 chr5 198819679 198819815 -810335 - FAM SINE Alu -19 166 27 271 265 79 11 chr5 198819864 198820053 -810097 - L1MEc LINE L1 -4857 1569 1368 2303 104 0 0 chr5 198820096 198820393 -809757 - AluSx SINE Alu -15 297 1 217 0 0 0 chr5 198820879 198820903 -809247 + (TTTA)n Simple_repeat Simple_repeat 2 148 0 2098 102 0 14 chr5 198820903 198821187 -808963 - AluY SINE Alu -29 282 1 325 285 112 11 chr5 198821417 198821596 -808554 - L1ME LINE L1 -460 5661 5465 2486 58 0 3 chr5 198821646 198821939 -808211 - AluY SINE Alu -19 292 1 184 236 109 0 chr5 198822036 198822091 -808059 + L2 LINE L2 3165 3225 -47 1015 152 0 24 chr5 198822640 198822805 -807345 + FRAM SINE Alu 1 160 -16 2218 203 77 77 chr5 198822984 198823871 -806279 - L1ME1 LINE L1 -4 6231 5347 1117 71 7 7 chr5 198823881 198824022 -806128 - AluSc SINE Alu -168 141 1 1089 240 83 81 chr5 198824024 198824629 -805521 - L1ME1 LINE L1 -4127 2269 1664 1414 157 21 47 chr5 198824634 198824951 -805199 - Tigger4(Zombi) DNA MER2_type 0 2731 32 2207 108 10 0 chr5 198825065 198825370 -804780 + AluSx SINE Alu 1 308 -4 279 0 0 0 chr5 198825517 198825548 -804602 + (A)n Simple_repeat Simple_repeat 1 31 0 871 197 0 0 chr5 198825549 198825701 -804449 + FRAM SINE Alu 1 152 -24 22 0 0 0 chr5 198826096 198826118 -804032 + AT_rich Low_complexity Low_complexity 1 22 0 285 116 0 0 chr5 198826146 198826189 -803961 + Alu SINE Alu 1 43 -256 1257 190 58 0 chr5 198826220 198826462 -803688 + LTR47A LTR ERVL 197 452 0 1337 104 0 11 chr5 198827213 198827396 -802754 - AluSg SINE Alu -129 181 1 1868 81 4 8 chr5 198827418 198827665 -802485 - AluSg SINE Alu -64 246 1 291 126 0 59 chr5 198827698 198827770 -802380 - Alu SINE Alu -6 296 247 635 60 52 17 chr5 198827770 198827886 -802264 - L1P LINE L1 -776 5389 5270 885 156 36 18 chr5 198827892 198828059 -802091 - L1MB3 LINE L1 -7 6176 6007 612 277 0 0 chr5 198828100 198828448 -801702 + GA-rich Low_complexity Low_complexity 1 348 0 1014 133 266 83 chr5 198829128 198829369 -800781 + AluJo SINE Alu 1 285 -17 1416 167 39 16 chr5 198829907 198830165 -799985 - AluJb SINE Alu -20 292 29 1867 82 4 8 chr5 198830175 198830418 -799732 - AluSc SINE Alu -13 296 55 1508 139 102 7 chr5 198830614 198830888 -799262 + AluJb SINE Alu 1 300 -12 1331 228 22 14 chr5 198830889 198831253 -798897 + L1 LINE L1 4319 4685 -1461 887 150 0 0 chr5 198831271 198831398 -798752 - FLAM_C SINE Alu -6 127 1 3978 246 51 9 chr5 198831398 198831499 -798651 - L1 LINE L1 -2310 3836 3741 2182 116 7 0 chr5 198831499 198831801 -798349 - AluSx SINE Alu -8 304 1 3978 246 51 9 chr5 198831801 198832858 -797292 - L1 LINE L1 -2405 3741 2629 198 0 0 0 chr5 198832987 198833009 -797141 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 617 241 144 70 chr5 198833023 198833126 -797024 + MLT1H LTR MaLR 1 95 -454 2317 89 7 3 chr5 198833126 198833429 -796721 + AluY SINE Alu 1 304 -7 617 241 144 70 chr5 198833429 198833595 -796555 + MLT1H LTR MaLR 95 290 -259 230 242 16 0 chr5 198834796 198834858 -795292 + GA-rich Low_complexity Low_complexity 2 64 0 1170 122 4 0 chr5 198835244 198835533 -794617 + (TG)n Simple_repeat Simple_repeat 1 290 0 23 0 0 0 chr5 198836017 198836040 -794110 + AT_rich Low_complexity Low_complexity 1 23 0 250 246 163 34 chr5 198836330 198836511 -793639 - L1MC4 LINE L1 -365 7677 7370 1506 190 46 3 chr5 198836758 198837042 -793108 - AluJb SINE Alu -16 296 1 2301 92 7 0 chr5 198837151 198837455 -792695 - AluSc SINE Alu -3 306 1 735 268 112 13 chr5 198837744 198838058 -792092 - L1MC4 LINE L1 -986 7056 6712 1223 175 88 16 chr5 198838151 198838402 -791748 - AluJo SINE Alu -30 282 14 810 125 9 0 chr5 198838502 198838614 -791536 - FLAM_C SINE Alu -18 125 13 277 268 33 52 chr5 198838684 198838837 -791313 - MER65A LTR ERV1 -47 398 249 259 172 35 17 chr5 198838950 198839008 -791142 - MER65A LTR ERV1 -386 59 1 879 176 275 60 chr5 198839133 198839448 -790702 - L1ME2 LINE L1 0 6164 5750 2035 153 3 0 chr5 198839448 198839748 -790402 - AluSx SINE Alu -11 301 1 879 176 275 60 chr5 198839748 198839818 -790332 - L1ME2 LINE L1 -414 5750 5696 4503 157 15 48 chr5 198839943 198840387 -789763 - L1M4c LINE L1 -5552 832 428 2452 56 0 0 chr5 198840387 198840692 -789458 + AluY SINE Alu 1 305 -6 4503 157 15 48 chr5 198840692 198841105 -789045 - L1M4c LINE L1 -5956 428 3 3196 189 58 44 chr5 198841091 198842100 -788050 + L1MB8 LINE L1 4845 5882 -296 * 2102 110 3 13 chr5 198842100 198842408 -787742 + AluSx SINE Alu 1 305 -7 3196 189 58 44 chr5 198842408 198842567 -787583 + L1MB8 LINE L1 5882 6037 -141 987 79 0 0 chr5 198842718 198842845 -787305 + AluY SINE Alu 173 299 -12 455 255 87 49 chr5 198842959 198842980 -787170 - L1M4 LINE L1 -1353 4793 4774 1976 210 80 30 chr5 198842980 198843419 -786731 - LOR1b LTR ERV1 0 461 1 455 255 87 49 chr5 198843419 198843683 -786467 - L1M4 LINE L1 -1372 4774 4497 1579 73 19 0 chr5 198843691 198843897 -786253 + MLT2A2 LTR ERVL 1 210 -243 2288 74 3 14 chr5 198843909 198844205 -785945 - AluSp SINE Alu -20 293 1 4508 211 67 26 chr5 198844222 198844747 -785403 - L1MEc LINE L1 -2895 4670 4168 1536 73 0 46 chr5 198844747 198844965 -785185 + AluY SINE Alu 98 305 -6 4508 211 67 26 chr5 198844965 198844978 -785172 - L1MEc LINE L1 -3397 4168 4157 2006 86 100 4 chr5 198844978 198845247 -784903 + AluSg SINE Alu 1 295 -15 4508 211 67 26 chr5 198845247 198846024 -784126 - L1MEc LINE L1 -3408 4157 3294 1114 99 0 0 chr5 198846139 198846281 -783869 - AluSq/x SINE Alu -171 142 1 829 163 46 7 chr5 198846362 198846515 -783635 - L1MB8 LINE L1 -16 6162 6004 1342 272 26 38 chr5 198846534 198847030 -783120 - L1MEc LINE L1 -5863 1883 1394 2338 72 3 3 chr5 198847615 198847907 -782243 + AluY SINE Alu 1 292 -19 2238 100 13 0 chr5 198848420 198848719 -781431 + AluY SINE Alu 1 303 -8 282 271 0 0 chr5 198849164 198849223 -780927 + MIR SINE MIR 51 109 -153 1431 190 0 49 chr5 198849317 198849601 -780549 + AluJo SINE Alu 9 278 -34 241 200 133 33 chr5 198849722 198849842 -780308 + MER5C DNA MER1_type 110 241 -83 1815 178 0 0 chr5 198850768 198851066 -779084 + AluSx SINE Alu 1 298 -14 23 92 0 0 chr5 198851121 198851186 -778964 + AT_rich Low_complexity Low_complexity 1 65 0 1935 128 17 14 chr5 198851643 198851939 -778211 - AluSq SINE Alu -16 297 1 820 138 88 6 chr5 198852624 198852784 -777366 - L1MD1 LINE L1 -8 6628 6456 2088 156 44 21 chr5 198852785 198853170 -776980 + L1MA7 LINE L1 5876 6269 -22 3031 206 85 22 chr5 198853185 198853305 -776845 - L1MD1 LINE L1 -165 6471 6360 2395 76 0 13 chr5 198853305 198853606 -776544 + AluY SINE Alu 3 299 -12 3031 206 85 22 chr5 198853606 198854720 -775430 - L1MD1 LINE L1 -276 6360 5166 449 217 66 71 chr5 198855198 198855424 -774726 - L1MD1 LINE L1 -2984 3556 3332 594 228 0 8 chr5 198855435 198855558 -774592 - FLAM_A SINE Alu -3 139 18 6159 207 96 29 chr5 198855573 198856583 -773567 - L1MD1 LINE L1 -3320 3220 2279 2214 95 7 0 chr5 198856583 198856868 -773282 - AluSg SINE Alu -14 296 10 6159 207 96 29 chr5 198856868 198857613 -772537 - L1MD1 LINE L1 -4261 2279 1585 1685 144 52 11 chr5 198857613 198857884 -772266 - AluJb SINE Alu -30 282 1 6159 207 96 29 chr5 198857884 198857980 -772170 - L1MD1 LINE L1 -4955 1585 1497 341 22 22 0 chr5 198857980 198858026 -772124 + (TG)n Simple_repeat Simple_repeat 2 48 0 6159 207 96 29 chr5 198858026 198858944 -771206 - L1MD1 LINE L1 -5043 1497 26 2503 72 0 0 chr5 198859091 198859396 -770754 + AluY SINE Alu 1 305 -6 2096 102 22 35 chr5 198860417 198860731 -769419 - AluSx SINE Alu -2 310 1 1024 128 20 0 chr5 198862313 198862503 -767647 + AluSg/x SINE Alu 131 323 0 549 275 207 30 chr5 198862567 198862934 -767216 + L3 LINE CR1 1139 1570 -7 1964 127 0 0 chr5 198863986 198864261 -765889 + AluSx SINE Alu 1 275 -37 306 281 69 44 chr5 198864730 198864933 -765217 + L1ME LINE L1 5627 5834 -287 1877 145 17 7 chr5 198865477 198865773 -764377 - AluJo SINE Alu -13 299 1 2141 107 7 0 chr5 198866120 198866400 -763750 - AluSx SINE Alu -30 282 1 1464 208 0 24 chr5 198866477 198866766 -763384 - AluJo SINE Alu -30 282 1 450 0 0 0 chr5 198867463 198867513 -762637 + (TG)n Simple_repeat Simple_repeat 2 51 0 207 0 0 0 chr5 198869363 198869386 -760764 + (TTG)n Simple_repeat Simple_repeat 2 24 0 297 0 0 0 chr5 198871074 198871107 -759043 + (TG)n Simple_repeat Simple_repeat 2 34 0 209 302 71 63 chr5 198871680 198871806 -758344 - L3 LINE CR1 -382 1195 1069 207 293 102 118 chr5 198871969 198872392 -757758 - L3 LINE CR1 -638 939 524 256 270 39 12 chr5 198874707 198874803 -755347 - MIR SINE MIR -59 149 49 1379 158 81 15 chr5 198879081 198879308 -750842 - Tigger3(Golem) DNA MER2_type -22 3007 2759 2341 74 0 0 chr5 198879308 198879605 -750545 + AluY SINE Alu 1 297 -14 1379 158 81 15 chr5 198879605 198879637 -750513 - Tigger3(Golem) DNA MER2_type -270 2759 2731 1610 157 39 0 chr5 198879638 198879924 -750226 + AluJb SINE Alu 1 297 -15 440 158 24 24 chr5 198879938 198880020 -750130 - Tigger3(Golem) DNA MER2_type -2947 82 1 1881 131 3 0 chr5 198880101 198880383 -749767 + AluJb SINE Alu 12 294 -18 2351 66 13 0 chr5 198880582 198880885 -749265 + AluY SINE Alu 1 307 -4 355 228 25 0 chr5 198882226 198882305 -747845 + Charlie5 DNA MER1_type 2 82 -2530 493 205 215 10 chr5 198882392 198882592 -747558 + Charlie5 DNA MER1_type 249 489 -2123 1725 96 4 0 chr5 198882599 198882838 -747312 + AluSc SINE Alu 1 240 -69 771 224 4 7 chr5 198882978 198883127 -747023 - L1M2 LINE L1 -535 5639 5491 2342 87 0 0 chr5 198883127 198883438 -746712 - AluY SINE Alu 0 311 1 771 224 4 7 chr5 198883438 198883465 -746685 - L1M2 LINE L1 -683 5491 5465 3755 113 50 23 chr5 198883699 198884264 -745886 + LTR19B LTR ERV1 1 580 0 205 98 24 49 chr5 198884288 198884329 -745821 - MIR SINE MIR -123 139 100 3597 77 2 0 chr5 198884751 198885203 -744947 - LTR13 LTR ERVK -554 453 1 2029 256 124 18 chr5 198885392 198886167 -743983 - L1MB5 LINE L1 -8 6166 5310 181 224 276 0 chr5 198886439 198886515 -743635 + MIR SINE MIR 35 131 -77 584 174 134 13 chr5 198888108 198888257 -741893 + L1MB3 LINE L1 5966 6132 -51 2438 57 0 0 chr5 198888261 198888558 -741592 + AluY SINE Alu 1 297 -14 828 145 7 7 chr5 198888570 198888708 -741442 + AluJo SINE Alu 1 138 -174 2170 116 3 0 chr5 198888709 198889020 -741130 + AluSp SINE Alu 2 313 0 4364 156 102 47 chr5 198889021 198889150 -741000 + L1MC2 LINE L1 5201 5321 -1023 1473 127 0 18 chr5 198889150 198889378 -740772 + AluSq SINE Alu 1 224 -89 4364 156 102 47 chr5 198889378 198890332 -739818 + L1MC2 LINE L1 5321 6342 -2 1743 227 72 10 chr5 198891141 198891652 -738498 - MER67A LTR ERV1 0 543 1 23 33 0 0 chr5 198891858 198891888 -738262 + GC_rich Low_complexity Low_complexity 1 30 0 2373 62 3 0 chr5 198892660 198892966 -737184 + AluY SINE Alu 1 307 -4 743 158 7 41 chr5 198893057 198893230 -736920 - FLAM_C SINE Alu 0 143 3 639 210 24 24 chr5 198894048 198894215 -735935 - L1MB7 LINE L1 -110 6074 5908 1620 164 7 23 chr5 198894215 198894519 -735631 + AluJo SINE Alu 1 299 -13 550 181 0 0 chr5 198894946 198895040 -735110 + AluSp/q SINE Alu 219 312 -1 240 324 10 29 chr5 198895226 198895328 -734822 - MIR SINE MIR -68 140 41 606 116 51 94 chr5 198896076 198896214 -733936 + AluSp/q SINE Alu 176 307 -6 324 180 0 137 chr5 198896290 198896451 -733699 - LOR1-int LTR ERV1 -3818 4302 4164 350 379 12 38 chr5 198896533 198896773 -733377 - L1M4 LINE L1 -2339 3807 3574 837 121 0 0 chr5 198898289 198898413 -731737 - AluSg/x SINE Alu -15 295 172 1901 147 3 3 chr5 198898531 198898843 -731307 + AluSx SINE Alu 1 312 0 722 270 93 29 chr5 198898864 198899346 -730804 + L1MC2 LINE L1 3064 3576 -2570 * 1074 269 29 13 chr5 198899328 198899703 -730447 + L1MC2 LINE L1 5588 5968 -1817 806 211 110 20 chr5 198899731 198899977 -730173 + L1MC2 LINE L1 6040 6307 -37 238 140 0 100 chr5 198900495 198900517 -729633 + MER75 DNA T2_type 459 475 -29 2313 238 32 78 chr5 198900517 198901532 -728618 - LTR5 LTR ERVK 0 969 1 238 140 0 100 chr5 198901532 198901559 -728591 + MER75 DNA T2_type 475 503 -1 3101 134 45 10 chr5 198901566 198902075 -728075 + MER1A DNA MER1_type 1 527 0 307 315 99 28 chr5 198902250 198902431 -727719 + MIR SINE MIR 13 206 -56 187 281 56 22 chr5 198903235 198903324 -726826 + L2 LINE L2 2968 3059 -213 22 0 0 0 chr5 198905024 198905046 -725104 + AT_rich Low_complexity Low_complexity 1 22 0 1462 211 13 0 chr5 198905046 198905345 -724805 - L1 LINE L1 -2015 4131 3829 * 4287 241 31 53 chr5 198905336 198905861 -724289 + L1MB2 LINE L1 3205 3740 -2406 1128 111 0 0 chr5 198905861 198906034 -724116 + AluY SINE Alu 129 301 0 4287 241 31 53 chr5 198906034 198907124 -723026 + L1MB2 LINE L1 3740 4835 -1311 1241 292 68 17 chr5 198907135 198907546 -722604 + MER70B LTR ERVL 4 435 -143 608 236 75 0 chr5 198907674 198907835 -722315 + L1MB2 LINE L1 4848 5020 -1126 * 990 165 72 0 chr5 198907810 198908004 -722146 + L1PA13 LINE L1 3712 3919 -2227 226 0 0 0 chr5 198908011 198908035 -722115 + AluY SINE Alu 21 44 -255 4566 118 7 1 chr5 198908036 198908711 -721439 + L1PA13 LINE L1 5471 6149 -14 814 205 6 0 chr5 198908721 198908892 -721258 + L1MB2 LINE L1 5026 5197 -949 3211 219 68 31 chr5 198908893 198909311 -720839 - MSTB-int LTR MaLR -824 827 426 1988 125 30 0 chr5 198909311 198909614 -720536 + AluSq SINE Alu 2 313 0 3211 219 68 31 chr5 198909614 198909993 -720157 - MSTB-int LTR MaLR -1225 426 1 2265 172 52 2 chr5 198909993 198910399 -719751 - MSTB LTR MaLR 0 426 1 2880 205 28 7 chr5 198910404 198911019 -719131 + L1MB2 LINE L1 5254 5881 -302 5295 67 15 0 chr5 198911019 198911691 -718459 + MER11B LTR ERVK 1 682 -554 2025 79 18 7 chr5 198911690 198911969 -718181 + MER11B LTR ERVK 951 1232 -4 * 1230 156 44 44 chr5 198911974 198912269 -717881 + L1MB2 LINE L1 5875 6169 -2 225 268 89 9 chr5 198912780 198912892 -717258 + L1M4 LINE L1 4531 4651 -1495 25 0 0 0 chr5 198912939 198912964 -717186 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 198913057 198913088 -717062 + AT_rich Low_complexity Low_complexity 1 31 0 6836 70 7 13 chr5 198913151 198913769 -716381 + L1PA7 LINE L1 4752 5372 -782 2126 121 0 0 chr5 198913769 198914075 -716075 + AluSc SINE Alu 4 309 0 6836 70 7 13 chr5 198914075 198914864 -715286 + L1PA7 LINE L1 5372 6151 -3 1194 206 104 0 chr5 198915762 198916117 -714033 - MER3 DNA MER1_type 0 2624 2233 251 143 48 0 chr5 198916120 198916183 -713967 - MER3 DNA MER1_type -47 162 97 2228 166 30 38 chr5 198916325 198916429 -713721 - L1PA16 LINE L1 -35 6131 6028 2054 36 0 16 chr5 198916429 198916715 -713435 - AluY SINE Alu 0 318 37 2228 166 30 38 chr5 198916715 198917080 -713070 - L1PA16 LINE L1 -138 6028 5666 1544 112 7 53 chr5 198917198 198917226 -712924 - L1MA2 LINE L1 0 6304 6276 195 42 0 0 chr5 198917226 198917250 -712900 + (TG)n Simple_repeat Simple_repeat 2 25 0 1544 112 7 53 chr5 198917250 198917506 -712644 - L1MA2 LINE L1 -28 6276 6033 339 250 155 34 chr5 198917779 198918043 -712107 - L1MC4 LINE L1 -974 7068 6773 2364 60 0 7 chr5 198918043 198918344 -711806 + AluY SINE Alu 1 299 -12 1916 136 7 3 chr5 198918349 198918659 -711491 + AluSx SINE Alu 1 311 -1 753 95 0 0 chr5 198919624 198919729 -710421 + L1MB1 LINE L1 6064 6168 0 480 208 71 77 chr5 198920133 198920301 -709849 - MER58B DNA MER1_type 0 341 175 543 238 72 6 chr5 198920303 198920484 -709666 - L1M4c LINE L1 -5037 1347 1155 285 257 9 0 chr5 198921208 198921304 -708846 - L1M3c LINE L1 -4717 1596 1080 2380 248 29 36 chr5 198921307 198922423 -707727 + L1MB5 LINE L1 1182 2397 -3985 623 260 0 0 chr5 198922423 198922546 -707604 + FLAM_A SINE Alu 1 123 -10 2380 248 29 36 chr5 198922546 198922779 -707371 + L1MB5 LINE L1 2397 2630 -3752 820 222 43 12 chr5 198922793 198923050 -707100 - L1M4 LINE L1 -3219 2927 2663 362 225 32 25 chr5 198923027 198923170 -706980 - L1MB5 LINE L1 -3053 3093 2952 * 1372 226 44 3 chr5 198923170 198923560 -706590 + L1MB5 LINE L1 3303 3708 -2674 5725 128 23 18 chr5 198923561 198924167 -705983 + MER4D LTR ERV1 1 615 -288 2839 93 10 2 chr5 198924167 198924566 -705584 - L1PA13 LINE L1 0 6163 5762 5725 128 23 18 chr5 198924566 198924857 -705293 + MER4D LTR ERV1 615 903 0 1228 218 5 108 chr5 198924867 198925285 -704865 + L1MB5 LINE L1 3726 4100 -2282 1409 232 64 42 chr5 198925286 198925738 -704412 - MLT1C LTR MaLR 0 467 6 5346 221 54 11 chr5 198925742 198927157 -702993 + L1MB5 LINE L1 4096 5572 -810 987 289 92 10 chr5 198927157 198927568 -702582 - MLT1C LTR MaLR 0 467 23 3236 194 34 12 chr5 198927588 198928263 -701887 + L1MB5 LINE L1 5568 6257 -153 343 296 185 14 chr5 198928342 198928629 -701521 + L1M4 LINE L1 4456 4791 -1355 1691 136 81 0 chr5 198929324 198929582 -700568 - AluSx SINE Alu -13 299 21 186 43 0 0 chr5 198929927 198929950 -700200 + (CAGG)n Simple_repeat Simple_repeat 2 24 0 1944 168 31 23 chr5 198930038 198930425 -699725 + MLT1B LTR MaLR 1 390 0 218 151 94 0 chr5 198930818 198930871 -699279 - MIR SINE MIR -111 151 94 41 36 0 0 chr5 198930871 198930926 -699224 + AT_rich Low_complexity Low_complexity 1 55 0 215 31 92 61 chr5 198930927 198931025 -699125 + (TTAA)n Simple_repeat Simple_repeat 3 103 0 206 359 0 0 chr5 198931032 198931096 -699054 - MIR SINE MIR -183 79 16 1724 155 54 23 chr5 198931128 198931482 -698668 + L1MA9 LINE L1 5935 6299 -13 249 238 67 29 chr5 198931658 198931763 -698387 + MLT1J1 LTR MaLR 1 109 -337 1264 243 103 22 chr5 198931953 198932360 -697790 + L2 LINE L2 2874 3313 0 215 329 73 0 chr5 198932781 198932863 -697287 + MIR SINE MIR 52 139 -69 1806 161 10 26 chr5 198934337 198934647 -695503 + AluSx SINE Alu 2 306 -6 740 240 25 110 chr5 198935617 198936025 -694125 - MER93b LTR ERV1 0 373 1 341 207 73 0 chr5 198936026 198936108 -694042 - L1MC5 LINE L1 -1133 6828 6741 259 313 0 0 chr5 198936159 198936223 -693927 + L2 LINE L2 3207 3270 -2 1635 189 8 25 chr5 198936301 198936655 -693495 - L1MA7 LINE L1 -1 6290 5943 22 0 0 0 chr5 198936669 198936691 -693459 + AT_rich Low_complexity Low_complexity 1 22 0 675 146 14 0 chr5 198937226 198937452 -692698 + (CA)n Simple_repeat Simple_repeat 1 229 0 1532 116 0 0 chr5 198939275 198939473 -690677 - AluSx SINE Alu -114 198 1 2648 264 62 32 chr5 198939476 198939883 -690267 + ERVL LTR ERVL 2622 3015 -2639 771 183 15 0 chr5 198939883 198940014 -690136 - FLAM_A SINE Alu 0 133 1 2648 264 62 32 chr5 198940014 198940582 -689568 + ERVL LTR ERVL 3015 3644 -2010 1742 148 0 4 chr5 198940730 198940986 -689164 + AluSx SINE Alu 36 290 -22 226 247 52 13 chr5 198941149 198941226 -688924 + MIR SINE MIR 170 249 -13 398 312 7 22 chr5 198941405 198941543 -688607 + L2 LINE L2 3136 3271 -1 395 281 42 80 chr5 198941552 198941815 -688335 - MLT1L LTR MaLR -125 490 238 1069 172 11 5 chr5 198941950 198942136 -688014 - MER20 DNA MER1_type -2 217 31 461 212 42 17 chr5 198942798 198942916 -687234 + MIR SINE MIR 113 233 -29 636 270 34 0 chr5 198943232 198943410 -686740 + MIR SINE MIR 69 252 -10 280 304 52 9 chr5 198945231 198945346 -684804 + MIR SINE MIR 18 137 -71 535 260 8 0 chr5 198945619 198945742 -684408 - L2 LINE L2 0 3313 3190 1651 149 4 14 chr5 198945882 198946157 -683993 + AluSx SINE Alu 1 272 -40 1920 196 48 3 chr5 198946357 198946734 -683416 + MSTD LTR MaLR 1 394 -2 449 202 44 18 chr5 198946769 198946883 -683267 + MIR3 SINE MIR 50 166 -42 1904 147 14 0 chr5 198947206 198947499 -682651 - AluSx SINE Alu -15 297 1 2017 137 10 0 chr5 198947700 198947999 -682151 + AluSq SINE Alu 1 302 -11 2070 119 11 0 chr5 198948010 198948313 -681837 + AluSx SINE Alu 4 309 0 246 266 78 23 chr5 198948328 198948456 -681694 + L1MC/D LINE L1 5617 5751 -2057 325 192 68 14 chr5 198949414 198949487 -680663 + MER112 DNA MER1_type 1 77 -183 493 241 32 25 chr5 198949560 198949718 -680432 + MER112 DNA MER1_type 91 249 -11 299 139 0 0 chr5 198951062 198951105 -679045 + Alu SINE Alu 2 44 -258 661 255 74 55 chr5 198951252 198951353 -678797 + Charlie8 DNA MER1_type 1 99 -242 2131 115 20 0 chr5 198951353 198951649 -678501 - AluSx SINE Alu -10 302 1 661 255 74 55 chr5 198951649 198951818 -678332 + Charlie8 DNA MER1_type 99 276 -65 239 158 0 18 chr5 198952216 198952273 -677877 + CT-rich Low_complexity Low_complexity 1 56 0 1606 107 0 0 chr5 198952310 198952516 -677634 - AluSq SINE Alu -18 295 90 343 303 0 0 chr5 198952617 198952716 -677434 + (CA)n Simple_repeat Simple_repeat 1 99 0 513 290 67 16 chr5 198952716 198952909 -677241 - MIR SINE MIR -11 251 49 1186 151 0 0 chr5 198953042 198953214 -676936 + AluJb SINE Alu 129 300 -12 1215 113 123 5 chr5 198953216 198953411 -676739 + AluSg/x SINE Alu 86 303 -9 305 300 110 20 chr5 198953454 198953654 -676496 + MIR SINE MIR 33 250 -12 207 237 26 40 chr5 198954266 198954342 -675808 - MIR3 SINE MIR -53 155 81 445 252 168 50 chr5 198954976 198955238 -674912 + LTR16A1 LTR ERVL 146 438 -19 37 0 0 0 chr5 198955238 198955275 -674875 + AT_rich Low_complexity Low_complexity 1 37 0 2212 112 0 0 chr5 198955275 198955560 -674590 - AluSx SINE Alu -27 285 1 282 202 24 24 chr5 198955588 198955672 -674478 - MIR SINE MIR -126 136 53 599 295 92 49 chr5 198956281 198956783 -673367 + L2 LINE L2 2766 3272 0 576 223 18 0 chr5 198956943 198957055 -673095 + MER81 DNA DNA 1 114 0 262 287 0 46 chr5 198957117 198957204 -672946 + MER63 DNA MER1_type 27 735 -101 1779 159 18 0 chr5 198957276 198957582 -672568 - AluJo SINE Alu 0 311 1 897 247 30 0 chr5 198958036 198958271 -671879 + MIR SINE MIR 14 255 -7 2114 108 3 29 chr5 198958524 198958830 -671320 + AluSx SINE Alu 1 298 -14 188 195 0 0 chr5 198958940 198958981 -671169 + MIR SINE MIR 58 98 -110 1627 216 8 40 chr5 198959003 198959349 -670801 - MLT1B LTR MaLR 0 390 56 1215 118 39 0 chr5 198959349 198959527 -670623 + MER30 DNA MER1_type 2 186 -44 1477 203 4 0 chr5 198959656 198959937 -670213 + AluSg SINE Alu 8 289 -21 443 259 78 66 chr5 198959974 198960114 -670036 + L2 LINE L2 2551 2688 -625 1967 155 0 7 chr5 198960114 198960411 -669739 + AluSx SINE Alu 1 295 -17 443 259 78 66 chr5 198960411 198960870 -669280 + L2 LINE L2 2688 3297 -16 270 0 0 0 chr5 198960870 198960900 -669250 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 443 259 78 66 chr5 198960900 198960913 -669237 + L2 LINE L2 3297 3308 -5 1214 113 16 0 chr5 198961517 198961703 -668447 - AluY SINE Alu -15 296 108 202 317 0 0 chr5 198961833 198961893 -668257 - MIR SINE MIR -157 105 46 687 195 0 0 chr5 198961911 198962039 -668111 + MSTD LTR MaLR 269 396 0 235 310 13 0 chr5 198962040 198962162 -667988 + L1P5 LINE L1 5322 5447 -704 234 271 225 0 chr5 198962159 198962288 -667862 + L1ME LINE L1 5623 5780 -390 * 2392 170 34 2 chr5 198962277 198963545 -666605 + L1MA7 LINE L1 4906 6290 -1 273 133 0 0 chr5 198963566 198963611 -666539 - L1MA5A LINE L1 -8 6289 6245 273 158 34 0 chr5 198963666 198963732 -666418 - L1MA5A LINE L1 -8 6289 6211 2443 76 6 13 chr5 198964329 198964644 -665506 - AluSq SINE Alu 0 313 1 698 206 42 6 chr5 198965524 198965689 -664461 - MER5A DNA MER1_type 0 189 19 856 121 35 0 chr5 198966939 198967055 -663095 - FRAM SINE Alu -56 120 1 894 189 12 12 chr5 198967253 198967417 -662733 + FRAM SINE Alu 2 165 -1 392 292 96 39 chr5 198967886 198968293 -661857 + HAL1b LINE L1 47 476 -872 2420 199 39 4 chr5 198968374 198969164 -660986 + L1M3 LINE L1 4760 5579 -601 21 36 0 0 chr5 198969784 198969812 -660338 + AT_rich Low_complexity Low_complexity 1 28 0 2234 124 0 0 chr5 198970006 198970305 -659845 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr5 198970315 198970336 -659814 + AT_rich Low_complexity Low_complexity 1 21 0 892 140 67 0 chr5 198970478 198970628 -659522 + U1 snRNA snRNA 5 164 -1 50 0 0 0 chr5 198970628 198970678 -659472 + AT_rich Low_complexity Low_complexity 1 50 0 236 317 57 44 chr5 198970766 198971309 -658841 + L1MC4 LINE L1 4591 5140 -1006 426 223 68 20 chr5 198971454 198971602 -658548 + L1MC4 LINE L1 5313 5467 -2341 911 267 56 33 chr5 198971632 198971969 -658181 + L1MC4 LINE L1 5532 5876 -1932 352 142 35 9 chr5 198972021 198972038 -658112 + (TA)n Simple_repeat Simple_repeat 2 17 -100 2456 90 6 0 chr5 198972038 198972349 -657801 + AluSq SINE Alu 1 313 0 352 142 35 9 chr5 198972349 198972444 -657706 + (TA)n Simple_repeat Simple_repeat 17 117 0 831 139 9 0 chr5 198972476 198972591 -657559 + FLAM_C SINE Alu 2 117 -16 215 323 0 0 chr5 198973695 198973757 -656393 + L2 LINE L2 3248 3309 -4 4801 151 54 54 chr5 198974907 198975849 -654301 - L1MA9 LINE L1 -25 6287 5343 2120 101 11 0 chr5 198975849 198976136 -654014 - AluSx SINE Alu -22 290 1 4801 151 54 54 chr5 198976136 198976222 -653928 - L1MA9 LINE L1 -968 5344 5259 1583 166 46 9 chr5 198976203 198976529 -653621 - L1MA9 LINE L1 -1742 4404 4067 * 245 286 22 0 chr5 198976569 198976660 -653490 - L1MC4 LINE L1 -1336 6706 6614 225 230 0 100 chr5 198976586 198976686 -653464 + L1MC4 LINE L1 6614 6703 -1339 * 292 234 11 32 chr5 198976682 198976776 -653374 + L1MC4 LINE L1 6614 6705 -1337 291 191 0 0 chr5 198976778 198976846 -653304 + (TA)n Simple_repeat Simple_repeat 2 69 0 288 215 0 75 chr5 198976873 198976966 -653184 - L1MC4 LINE L1 -1343 6699 6614 310 293 37 107 chr5 198977852 198978122 -652028 + MIR SINE MIR 12 262 0 198 0 0 0 chr5 198978144 198978166 -651984 + (A)n Simple_repeat Simple_repeat 1 22 0 376 280 56 16 chr5 198978384 198978509 -651641 + MIR SINE MIR 58 187 -75 2311 90 0 32 chr5 198979584 198979895 -650255 + AluSq SINE Alu 1 301 -12 221 416 36 7 chr5 198981110 198981247 -648903 + MIR SINE MIR 10 150 -112 216 97 0 0 chr5 198981602 198981633 -648517 + (CA)n Simple_repeat Simple_repeat 1 31 0 1751 112 0 43 chr5 198981838 198982096 -648054 + AluSq SINE Alu 5 251 -62 337 300 47 60 chr5 198982409 198982642 -647508 + L3 LINE CR1 326 555 -1022 282 281 89 52 chr5 198982708 198982843 -647307 + MIR SINE MIR 62 201 -61 334 331 79 0 chr5 198982886 198983013 -647137 + L2 LINE L2 3136 3272 0 2312 46 0 0 chr5 198983120 198983428 -646722 - AluY SINE Alu 0 308 1 313 322 28 21 chr5 198983463 198983606 -646544 + L3 LINE CR1 634 777 -800 402 318 217 13 chr5 198984232 198984789 -645361 + L2 LINE L2 1623 2293 -1021 2025 226 41 26 chr5 198984891 198985426 -644724 + MER74A LTR ERVL 15 557 -1 296 293 0 9 chr5 198985426 198985542 -644608 + L2 LINE L2 2286 2400 -914 755 142 80 167 chr5 198985651 198985890 -644260 + MER20 DNA MER1_type 1 218 -1 393 310 26 88 chr5 198985891 198986117 -644033 + L2 LINE L2 3034 3245 -27 705 319 71 54 chr5 198987249 198987404 -642746 + L3 LINE CR1 1034 1185 -392 543 158 39 47 chr5 198987404 198987531 -642619 - L1MA5 LINE L1 0 6300 6175 705 319 71 54 chr5 198987531 198987908 -642242 + L3 LINE CR1 1185 1575 -2 1328 161 132 22 chr5 198988042 198988315 -641835 - AluJo SINE Alu -9 303 1 385 320 99 0 chr5 198990502 198990683 -639467 + MIR SINE MIR 64 262 0 2176 182 64 10 chr5 198990879 198991363 -638787 - L1MB8 LINE L1 -2 6176 5667 28 0 0 0 chr5 198991383 198991411 -638739 + AT_rich Low_complexity Low_complexity 1 28 0 1590 198 24 0 chr5 198991713 198992011 -638139 + AluJo SINE Alu 1 305 -7 430 321 146 11 chr5 198992172 198992446 -637704 - L3 LINE CR1 -9 1568 1258 937 81 0 0 chr5 198992457 198992581 -637569 - AluY SINE Alu -11 300 177 226 197 295 0 chr5 198992581 198992642 -637508 - AluJ/FLAM SINE Alu -223 79 1 584 155 0 10 chr5 198992653 198992756 -637394 - L1MB2 LINE L1 -2 6169 6068 269 221 15 0 chr5 198993290 198993358 -636792 - L1MB2 LINE L1 -342 5828 5760 522 229 59 12 chr5 198993546 198993716 -636434 - L1MB8 LINE L1 -2328 5480 5303 10771 196 30 42 chr5 198993874 198996916 -633234 + L1M2a LINE L1 2 3009 -4159 295 327 27 20 chr5 198997037 198997158 -632992 - MIR SINE MIR -63 145 34 1847 130 0 0 chr5 198997277 198997539 -632611 - AluSg SINE Alu -10 300 39 6604 40 0 2 chr5 198997565 198998350 -631800 - L1PA4 LINE L1 -1 6154 5372 * 41820 47 5 0 chr5 198998343 199003432 -626718 - L1PA4 LINE L1 -1036 5110 1 914 253 90 23 chr5 199003443 199004041 -626109 + L1M1 LINE L1 3129 3780 -3785 * 4320 223 37 22 chr5 199004038 199005258 -624892 - L1MDa LINE L1 -1326 5080 3843 549 235 17 77 chr5 199005250 199005381 -624769 - L1MDa LINE L1 -3661 2745 2633 * 7335 151 16 24 chr5 199005381 199007372 -622778 + L1PA13 LINE L1 4177 6163 0 549 235 17 77 chr5 199007372 199007474 -622676 - L1MDa LINE L1 -3773 2633 2526 * 7406 139 13 14 chr5 199007465 199008405 -621745 - L1MA2 LINE L1 0 6304 5365 2159 119 0 3 chr5 199008405 199008699 -621451 - AluSx SINE Alu -19 293 1 7406 139 13 14 chr5 199008699 199009767 -620383 - L1MA2 LINE L1 -939 5365 4286 1261 223 51 42 chr5 199009775 199010118 -620032 - L1MDa LINE L1 -3890 2516 2167 1664 173 24 0 chr5 199010118 199010407 -619743 + AluJb SINE Alu 1 296 -16 1261 223 51 42 chr5 199010407 199010516 -619634 - L1MDa LINE L1 -4239 2167 2060 905 269 5 19 chr5 199010516 199010728 -619422 - MER82 DNA MER2_type 0 653 445 290 308 66 33 chr5 199010760 199010942 -619208 + MIR SINE MIR 1 188 -74 556 174 0 0 chr5 199011006 199011092 -619058 - MER82 DNA MER2_type -566 87 2 3559 202 50 84 chr5 199011100 199011297 -618853 - L1MDa LINE L1 -4358 2048 1846 6546 27 43 7 chr5 199011297 199012396 -617754 - SVA Other Other -955 1386 55 345 24 0 0 chr5 199012396 199012438 -617712 + (GGGAGA)n Simple_repeat Simple_repeat 3 44 0 3559 202 50 84 chr5 199012438 199013011 -617139 - L1MDa LINE L1 -4559 1847 1327 2271 94 3 0 chr5 199013011 199013318 -616832 - AluY SINE Alu 0 308 1 3559 202 50 84 chr5 199013318 199013751 -616399 - L1MDa LINE L1 -5079 1327 881 489 140 32 21 chr5 199013782 199013875 -616275 + MER4A LTR ERV1 1 94 -570 1779 142 9 27 chr5 199013878 199014230 -615920 + MER4A LTR ERV1 261 664 0 247 280 67 13 chr5 199014260 199014335 -615815 - L1MDa LINE L1 -5555 854 776 216 111 0 0 chr5 199014501 199014537 -615613 + (TC)n Simple_repeat Simple_repeat 1 36 0 2162 173 66 29 chr5 199014632 199015043 -615107 - MSTB LTR MaLR 0 426 1 5057 163 27 2 chr5 199015218 199016082 -614068 - L1MA6 LINE L1 -25 6275 5391 340 232 53 105 chr5 199016736 199016872 -613278 - L1MEd LINE L1 -4908 1211 1086 965 118 0 0 chr5 199016872 199016999 -613151 - FLAM_C SINE Alu -6 127 1 340 232 53 105 chr5 199016999 199017052 -613098 - L1MEd LINE L1 -5033 1086 1032 366 32 74 42 chr5 199017086 199017181 -612969 + (TTAA)n Simple_repeat Simple_repeat 4 101 0 480 132 77 0 chr5 199017432 199017523 -612627 - L1MB2 LINE L1 0 6171 6074 1073 217 125 27 chr5 199017553 199017890 -612260 - LTR37A LTR ERV1 -53 373 4 797 191 20 14 chr5 199018019 199018166 -611984 - L1PB4 LINE L1 -8 6148 6001 512 152 32 19 chr5 199018169 199018327 -611823 + (TCCA)n Simple_repeat Simple_repeat 3 162 0 321 190 0 0 chr5 199018375 199018433 -611717 - L2 LINE L2 -32 3281 3224 505 178 0 9 chr5 199018480 199018587 -611563 - L1PB4 LINE L1 -116 6040 5935 2234 118 13 0 chr5 199018740 199019045 -611105 - AluSx SINE Alu -3 309 1 2142 145 0 0 chr5 199019220 199019530 -610620 + AluSx SINE Alu 1 310 -2 2497 141 100 71 chr5 199019575 199020219 -609931 + MER4A LTR ERV1 1 872 0 1564 180 20 30 chr5 199021199 199021494 -608656 + AluJo SINE Alu 2 293 -19 216 0 0 0 chr5 199021495 199021519 -608631 + (GA)n Simple_repeat Simple_repeat 1 24 0 2421 105 0 3 chr5 199021592 199021905 -608245 + AluSx SINE Alu 1 312 0 281 190 0 101 chr5 199022050 199022129 -608021 + MER21A LTR ERV1 1 71 -860 2503 126 58 31 chr5 199022135 199022488 -607662 - MER4A-int LTR ERV1 -5765 833 491 1972 195 91 30 chr5 199022488 199022950 -607200 + LTR2B LTR ERV1 1 490 0 2503 126 58 31 chr5 199022950 199023298 -606852 - MER4A-int LTR ERV1 -6107 491 1 1770 161 179 57 chr5 199023298 199023890 -606260 - MER4A LTR ERV1 0 664 1 770 111 342 11 chr5 199023906 199024096 -606054 + MER21A LTR ERV1 11 263 -668 2260 154 94 76 chr5 199024102 199024642 -605508 + MER21A LTR ERV1 376 925 -6 2472 57 7 0 chr5 199024900 199025197 -604953 - AluY SINE Alu -12 299 1 297 274 19 9 chr5 199025561 199025667 -604483 + L1MC4 LINE L1 7936 8042 0 444 287 45 13 chr5 199025915 199026072 -604078 - MLT1F1 LTR MaLR -11 556 395 413 203 40 68 chr5 199026137 199026285 -603865 - MLT1F1 LTR MaLR -326 264 121 479 272 157 45 chr5 199027080 199027411 -602739 + MLT1J LTR MaLR 43 410 -101 581 239 137 26 chr5 199029097 199029331 -600819 + MIR SINE MIR 2 261 -1 2260 105 17 0 chr5 199029900 199030196 -599954 - AluSq SINE Alu -10 303 3 2137 118 0 14 chr5 199030254 199030550 -599600 - AluSg SINE Alu -18 292 1 317 319 136 50 chr5 199034095 199034717 -595433 + L1 LINE L1 4019 4733 -1413 1645 168 10 59 chr5 199034717 199035021 -595129 + AluJb SINE Alu 1 289 -23 317 319 136 50 chr5 199035021 199035235 -594915 + L1 LINE L1 4733 4927 -1219 538 185 138 83 chr5 199035244 199035478 -594672 + MSTB2 LTR MaLR 1 240 -192 1310 218 27 100 chr5 199035478 199036021 -594129 + L1ME1 LINE L1 5670 6178 0 682 183 82 53 chr5 199036110 199036318 -593832 + L1MC4 LINE L1 7819 8032 -10 279 259 106 0 chr5 199037756 199037841 -592309 + MIR SINE MIR 169 262 0 839 273 62 36 chr5 199038200 199038508 -591642 + MER46C DNA MER2_type 5 320 -18 346 316 70 53 chr5 199038615 199038970 -591180 + L2 LINE L2 2605 2965 -349 511 186 47 31 chr5 199039293 199039422 -590728 + MLT1G3 LTR MaLR 14 144 -451 * 697 271 254 6 chr5 199039402 199039752 -590398 + MLT1G3 LTR MaLR 92 563 -4 1088 260 117 61 chr5 199039876 199040434 -589716 - MLT1G1 LTR MaLR -6 589 1 184 274 88 18 chr5 199041092 199041205 -588945 + L3b LINE CR1 1105 1225 -358 374 326 45 0 chr5 199041225 199041357 -588793 + MIR3 SINE MIR 38 175 -33 25 31 0 0 chr5 199042412 199042444 -587706 + GC_rich Low_complexity Low_complexity 1 32 0 291 264 0 0 chr5 199042465 199042518 -587632 + G-rich Low_complexity Low_complexity 1 53 0 295 299 76 35 chr5 199043712 199043856 -586294 - MIR SINE MIR -71 191 42 2368 109 0 0 chr5 199045020 199045322 -584828 + AluSg SINE Alu 1 302 -8 2314 90 3 3 chr5 199045556 199045845 -584305 + AluSc SINE Alu 1 289 -20 216 247 178 34 chr5 199045998 199046144 -584006 + L3 LINE CR1 1332 1498 -79 205 306 197 68 chr5 199047544 199047691 -582459 - MIR3 SINE MIR -28 180 15 309 210 0 0 chr5 199047871 199047933 -582217 - L3 LINE CR1 -2 1575 1514 206 218 36 0 chr5 199048912 199048967 -581183 + (TA)n Simple_repeat Simple_repeat 2 58 0 205 191 21 75 chr5 199049699 199049793 -580357 + (CCCCAG)n Simple_repeat Simple_repeat 5 93 0 852 270 146 22 chr5 199051044 199051860 -578290 + L2 LINE L2 2349 3312 -1 273 98 0 0 chr5 199052187 199052228 -577922 + (CA)n Simple_repeat Simple_repeat 2 42 0 24 0 0 0 chr5 199052470 199052494 -577656 + AT_rich Low_complexity Low_complexity 1 24 0 407 284 151 4 chr5 199052578 199052803 -577347 - L1ME4a LINE L1 -281 5840 5583 262 262 145 11 chr5 199052841 199053138 -577012 - L1M2 LINE L1 -771 5520 5173 502 274 34 51 chr5 199053956 199054252 -575898 + L2 LINE L2 1940 2230 -1084 2036 117 105 66 chr5 199054254 199054297 -575853 - MSTC LTR MaLR -3 425 385 2314 109 0 10 chr5 199054297 199054610 -575540 + AluSg SINE Alu 1 310 0 2036 117 105 66 chr5 199054610 199054958 -575192 - MSTC LTR MaLR -43 385 19 321 356 69 0 chr5 199054958 199055132 -575018 + L2 LINE L2 2233 2418 -896 23 0 0 0 chr5 199055394 199055417 -574733 + AT_rich Low_complexity Low_complexity 1 23 0 2439 86 0 0 chr5 199055742 199056044 -574106 + AluSx SINE Alu 1 302 -10 205 261 15 15 chr5 199056723 199056788 -573362 + GA-rich Low_complexity Low_complexity 2 66 0 506 218 152 6 chr5 199058742 199058907 -571243 + MIR SINE MIR 47 235 -27 300 332 62 70 chr5 199058908 199059164 -570986 - L1MEc LINE L1 -4315 2081 1828 300 229 112 56 chr5 199058993 199059172 -570978 + L1MC5 LINE L1 7576 7764 -197 213 263 0 35 chr5 199059199 199059256 -570894 - MIR3 SINE MIR -30 178 124 2352 69 0 0 chr5 199059509 199059840 -570310 - AluY SINE Alu 0 311 9 334 389 17 6 chr5 199061270 199061445 -568705 + MIR SINE MIR 15 191 -71 249 250 17 117 chr5 199061622 199061742 -568408 + MLT1I LTR MaLR 294 401 -8 2292 92 3 3 chr5 199061786 199062079 -568071 + AluSx SINE Alu 1 293 -19 920 273 107 15 chr5 199062088 199062546 -567604 + L1MC4a LINE L1 5826 6325 -1483 302 252 49 32 chr5 199062671 199062794 -567356 + L1MC4 LINE L1 6658 6782 -1260 329 292 15 0 chr5 199062805 199062935 -567215 + L1MC4a LINE L1 7108 7239 -569 668 292 111 41 chr5 199063694 199064208 -565942 + L1MC4 LINE L1 7492 8041 -1 488 220 126 38 chr5 199065126 199065368 -564782 - MLT1H LTR MaLR -41 368 112 417 257 59 0 chr5 199065462 199065598 -564552 + MLT1J LTR MaLR 113 256 -255 341 191 64 75 chr5 199065740 199065834 -564316 - L2 LINE L2 0 3313 3221 614 170 19 0 chr5 199065839 199065945 -564205 + L1MD2 LINE L1 6066 6173 -186 260 220 0 0 chr5 199066137 199066187 -563963 + MER94 DNA DNA 1 50 -84 233 257 14 14 chr5 199066816 199066886 -563264 - MLT1J LTR MaLR -292 219 150 8507 51 5 0 chr5 199066907 199067871 -562279 + LTR5 LTR ERVK 1 969 0 5285 109 52 47 chr5 199068069 199069232 -560918 + MER11A LTR ERVK 1 1266 0 345 297 67 18 chr5 199069998 199070163 -559987 + MLT1J LTR MaLR 248 420 -91 343 303 55 0 chr5 199070365 199070474 -559676 - MER67A LTR ERV1 -15 528 414 269 279 99 17 chr5 199070648 199070820 -559330 - MER67B LTR ERV1 -475 186 1 717 104 0 0 chr5 199071054 199071169 -558981 - AluSp/q SINE Alu -17 296 182 200 204 23 0 chr5 199071591 199071635 -558515 + CT-rich Low_complexity Low_complexity 1 45 0 832 109 0 0 chr5 199071636 199071746 -558404 + AluSp/q SINE Alu 192 301 -12 713 176 7 59 chr5 199071746 199071796 -558354 + MLT1D LTR MaLR 361 412 -93 1963 147 10 3 chr5 199071796 199072089 -558061 - AluJb SINE Alu -15 297 3 713 176 7 59 chr5 199072089 199072191 -557959 + MLT1D LTR MaLR 412 505 0 848 179 62 6 chr5 199072356 199072535 -557615 + MER5A DNA MER1_type 1 189 0 1088 183 86 26 chr5 199072729 199072847 -557303 + MLT1A1 LTR MaLR 21 131 -234 2321 102 3 0 chr5 199072847 199073141 -557009 + AluY SINE Alu 11 305 -6 1088 183 86 26 chr5 199073141 199073290 -556860 + MLT1A1 LTR MaLR 131 304 -61 2465 84 0 0 chr5 199073311 199073607 -556543 - AluSg SINE Alu -14 296 1 556 276 0 28 chr5 199073714 199073859 -556291 + MLT1A1 LTR MaLR 160 300 -65 306 235 74 0 chr5 199073859 199073940 -556210 - MLT2B3 LTR ERVL -139 415 329 1815 190 37 3 chr5 199073947 199074273 -555877 + MLT2B3 LTR ERVL 118 454 -100 246 225 101 58 chr5 199074274 199074412 -555738 + MIR SINE MIR 65 208 -54 1793 236 37 18 chr5 199074653 199074686 -555464 - MLT1C LTR MaLR 0 467 436 1551 171 87 9 chr5 199074686 199075007 -555143 + MER7A DNA MER2_type 2 345 -1 1793 236 37 18 chr5 199075007 199075431 -554719 - MLT1C LTR MaLR -31 436 1 1113 239 98 7 chr5 199077142 199077448 -552702 + L1MC4 LINE L1 7569 7902 -140 21 0 0 0 chr5 199077488 199077509 -552641 + AT_rich Low_complexity Low_complexity 1 21 0 822 309 72 8 chr5 199077512 199077887 -552263 + L1MC4a LINE L1 5443 5841 -1967 2386 106 19 11 chr5 199078195 199078562 -551588 + L1PA15 LINE L1 5793 6162 -3 2203 92 3 14 chr5 199079259 199079552 -550598 + AluSg SINE Alu 1 290 -20 261 0 0 0 chr5 199079572 199079601 -550549 + (TG)n Simple_repeat Simple_repeat 2 30 0 489 190 0 0 chr5 199080014 199080114 -550036 + (TA)n Simple_repeat Simple_repeat 1 100 0 376 224 24 0 chr5 199080331 199080416 -549734 - LTR33A LTR ERVL 0 523 437 412 292 117 38 chr5 199080454 199080546 -549604 + L1MC4 LINE L1 801 884 -5426 1747 155 28 3 chr5 199080546 199080830 -549320 + AluSx SINE Alu 1 291 -21 412 292 117 38 chr5 199080830 199081498 -548652 + L1MC4 LINE L1 884 1670 -4640 2141 119 6 25 chr5 199081534 199081852 -548298 + AluSx SINE Alu 1 312 0 322 299 89 59 chr5 199081853 199082124 -548026 + L1MC4 LINE L1 1765 2043 -4267 1000 245 211 18 chr5 199082147 199082772 -547378 + L1MC4 LINE L1 2130 2875 -3254 484 220 158 0 chr5 199082766 199082943 -547207 - L1M4 LINE L1 -2821 3325 3121 * 314 274 51 90 chr5 199083719 199083832 -546318 - MIR SINE MIR -36 226 125 1975 129 24 7 chr5 199083832 199084127 -546023 + AluSx SINE Alu 9 308 -4 314 274 51 90 chr5 199084127 199084247 -545903 - MIR SINE MIR -137 125 2 189 276 69 0 chr5 199085568 199085626 -544524 + L2 LINE L2 3248 3309 -4 22 0 0 0 chr5 199087061 199087083 -543067 + AT_rich Low_complexity Low_complexity 1 22 0 330 238 33 131 chr5 199090340 199090462 -539688 - L2 LINE L2 -3 3269 3160 2947 251 128 55 chr5 199090827 199091044 -539106 + L1MC4 LINE L1 4708 4908 -3117 2324 94 7 0 chr5 199091044 199091341 -538809 + AluSc SINE Alu 1 299 -10 2947 251 128 55 chr5 199091341 199094044 -536106 + L1MC4 LINE L1 4908 8025 0 2430 83 3 0 chr5 199095440 199095742 -534408 + AluY SINE Alu 1 303 -8 607 237 164 0 chr5 199096010 199096162 -533988 - MER58C DNA MER1_type -2 213 37 2160 122 7 0 chr5 199096251 199096555 -533595 - AluSx SINE Alu -4 308 3 235 283 125 17 chr5 199096595 199096715 -533435 + L1MC5 LINE L1 7742 7874 -87 2298 113 0 19 chr5 199096730 199097048 -533102 + AluSq SINE Alu 1 312 -1 2019 138 7 17 chr5 199097079 199097377 -532773 + AluSx SINE Alu 1 295 -17 287 250 119 76 chr5 199098676 199099004 -531146 + L1MC4a LINE L1 5694 6035 -1773 22 56 0 0 chr5 199099083 199099119 -531031 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr5 199099936 199099967 -530183 + GC_rich Low_complexity Low_complexity 1 31 0 1113 126 63 24 chr5 199100672 199100878 -529272 - L1MA3 LINE L1 -3 6302 6089 1128 205 205 52 chr5 199100890 199101518 -528632 - Charlie2 DNA MER1_type -83 2779 2056 688 142 133 0 chr5 199101704 199101824 -528326 + MER3 DNA MER1_type 74 209 0 360 176 44 0 chr5 199101764 199101832 -528318 - MER3 DNA MER1_type -99 110 40 * 1790 168 7 10 chr5 199102034 199102344 -527806 - AluJb SINE Alu 0 312 4 200 125 25 0 chr5 199102431 199102471 -527679 + (CA)n Simple_repeat Simple_repeat 2 42 0 1342 176 100 3 chr5 199102518 199102807 -527343 + MER33 DNA MER1_type 8 324 0 1639 171 0 60 chr5 199102970 199103144 -527006 - AluJo SINE Alu -11 301 153 2262 102 3 3 chr5 199103144 199103439 -526711 - AluSx SINE Alu -17 295 1 1639 171 0 60 chr5 199103439 199103580 -526570 - AluJo SINE Alu -159 153 5 21 0 0 0 chr5 199103586 199103607 -526543 + AT_rich Low_complexity Low_complexity 1 21 0 2186 91 0 4 chr5 199103690 199103965 -526185 - AluSq SINE Alu -39 274 1 820 145 0 58 chr5 199103970 199104108 -526042 - FLAM_C SINE Alu -3 130 1 301 281 133 21 chr5 199104540 199104924 -525226 + L1MC4a LINE L1 4036 4462 -1684 284 296 59 9 chr5 199105554 199105774 -524376 + L1MC4a LINE L1 5097 5327 -819 755 290 79 19 chr5 199105797 199106163 -523987 + L1MC4a LINE L1 5400 5787 -2021 1240 164 5 0 chr5 199106165 199106372 -523778 - MLT1C LTR MaLR 0 467 260 1653 217 78 8 chr5 199106459 199106534 -523616 + LTR2 LTR ERV1 41 109 -340 342 0 0 0 chr5 199106534 199106572 -523578 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1653 217 78 8 chr5 199106572 199106878 -523272 + LTR2 LTR ERV1 109 449 0 1533 161 4 22 chr5 199106878 199107145 -523005 - MLT1C LTR MaLR -205 262 1 339 284 101 24 chr5 199107146 199107315 -522835 + L1MC4a LINE L1 5786 5967 -1841 21 57 0 0 chr5 199107463 199107498 -522652 + AT_rich Low_complexity Low_complexity 1 35 0 514 231 116 0 chr5 199108150 199108234 -521916 - MIR SINE MIR -24 238 165 225 0 0 0 chr5 199108234 199108259 -521891 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 420 71 0 0 chr5 199108258 199108314 -521836 + (TA)n Simple_repeat Simple_repeat 1 56 0 514 231 116 0 chr5 199108259 199108376 -521774 - MIR SINE MIR -97 165 75 446 197 123 0 chr5 199108761 199108883 -521267 + MIR SINE MIR 82 218 -44 307 262 155 21 chr5 199108882 199109050 -521100 - MIR SINE MIR -58 150 18 * 421 263 81 36 chr5 199109589 199109894 -520256 - MLT1J2 LTR MaLR -6 403 75 31 0 0 0 chr5 199110134 199110165 -519985 + AT_rich Low_complexity Low_complexity 1 31 0 2148 216 110 21 chr5 199110180 199110698 -519452 - MLT1F1 LTR MaLR -3 564 1 243 0 0 0 chr5 199111118 199111145 -519005 + (TG)n Simple_repeat Simple_repeat 1 27 0 1556 167 0 45 chr5 199112098 199112385 -517765 + AluJb SINE Alu 36 309 -3 938 197 93 101 chr5 199112528 199112945 -517205 + MLT2D LTR ERVL 1 414 0 465 62 16 0 chr5 199113001 199113065 -517085 - FRAM/FAM SINE Alu -101 84 20 1200 166 114 7 chr5 199113114 199113404 -516746 + LTR54B LTR ERV1 176 496 -2 2356 92 3 7 chr5 199114331 199114637 -515513 + AluSp SINE Alu 1 305 -8 1070 190 97 17 chr5 199114681 199114918 -515232 + MER67B LTR ERV1 1 256 -405 1995 150 0 58 chr5 199114919 199115265 -514885 - Tigger3(Golem) DNA MER2_type 0 3029 2704 1693 224 22 8 chr5 199115444 199115815 -514335 - L1M3e LINE L1 -6648 382 7 880 271 88 19 chr5 199115843 199116208 -513942 - L1MA9 LINE L1 -29 7304 6915 1399 167 33 85 chr5 199116281 199116586 -513564 - AluJo SINE Alu -23 289 1 6215 186 40 22 chr5 199116588 199116845 -513305 - L1MA9 LINE L1 -407 6926 6675 2928 76 0 13 chr5 199116845 199117225 -512925 - THE1C LTR MaLR 0 375 1 6215 186 40 22 chr5 199117225 199117258 -512892 - L1MA9 LINE L1 -658 6675 6644 180 0 0 0 chr5 199117258 199117278 -512872 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1981 142 0 4 chr5 199117278 199117559 -512591 - AluJb SINE Alu -32 280 1 6215 186 40 22 chr5 199117559 199119158 -510992 - L1MA9 LINE L1 -688 6645 5002 35336 87 9 10 chr5 199119160 199125304 -504846 - L1PA6 LINE L1 -2 6152 11 2310 94 0 0 chr5 199125324 199125612 -504538 - AluSg SINE Alu -22 288 1 4117 223 45 64 chr5 199125615 199125645 -504505 - L1MA9 LINE L1 -2161 5006 4977 2077 145 0 0 chr5 199125645 199125942 -504208 - AluSx SINE Alu -15 297 1 4117 223 45 64 chr5 199125942 199126688 -503462 - L1MA9 LINE L1 -2190 4977 4269 2076 109 10 20 chr5 199126688 199126981 -503169 + AluSx SINE Alu 1 290 -22 4117 223 45 64 chr5 199126981 199127672 -502478 - L1MA9 LINE L1 -2898 4269 3566 3389 97 4 4 chr5 199127673 199128147 -502003 + L1P LINE L1 1630 2103 -4043 32253 114 12 55 chr5 199128163 199134596 -495554 + L1PA7 LINE L1 12 6152 -2 674 269 68 4 chr5 199134603 199134867 -495283 - L1MA9 LINE L1 -3594 3573 3293 744 218 16 10 chr5 199134881 199135074 -495076 - L1MA9 LINE L1 -4841 2327 2134 5024 25 5 0 chr5 199135084 199135638 -494512 - L1PA4 LINE L1 -3 6152 5596 844 104 0 0 chr5 199135660 199135809 -494341 - AluSg/x SINE Alu 0 325 177 1266 240 34 3 chr5 199135810 199136106 -494044 - L1MA9 LINE L1 -5144 2024 1720 1978 195 16 31 chr5 199136672 199137090 -493060 - L1MC2 LINE L1 -280 5875 5468 425 300 101 48 chr5 199139379 199139836 -490314 - LTR16C LTR ERVL -10 481 1 192 324 29 20 chr5 199140290 199140392 -489758 - L2 LINE L2 -30 3242 3140 43677 32 24 2 chr5 199141263 199147279 -482871 - L1PA2 LINE L1 0 6155 1 1123 228 106 11 chr5 199147811 199148148 -482002 - L1MD2 LINE L1 -45 6143 5783 894 149 8 15 chr5 199148339 199148473 -481677 + FLAM_C SINE Alu 1 133 0 456 171 73 0 chr5 199148579 199148661 -481489 + HY4 scRNA scRNA 1 88 -5 816 238 117 12 chr5 199148675 199148915 -481235 + MER76 LTR ERV 21 285 -403 646 99 9 72 chr5 199148932 199149043 -481107 + MER83 LTR ERV1 1 104 -344 1338 148 111 138 chr5 199149052 199149457 -480693 + MER83 LTR ERV1 55 448 0 1153 259 40 22 chr5 199149457 199149827 -480323 + MER76 LTR ERV 312 688 0 1237 252 72 61 chr5 199150597 199151125 -479025 + MLT2B3 LTR ERVL 1 534 -20 345 158 0 0 chr5 199151185 199151242 -478908 + MLT2B1 LTR ERVL 464 520 0 804 157 0 0 chr5 199151337 199151458 -478692 + FLAM_A SINE Alu 14 134 -8 2675 271 83 27 chr5 199151459 199152461 -477689 + HERVL-B1 LTR ERVL 143 1200 -4454 1049 222 30 0 chr5 199152443 199152641 -477509 + ERVL LTR ERVL 3212 3415 -2349 * 281 240 94 81 chr5 199152641 199152818 -477332 + L1M4 LINE L1 2590 2763 -3383 1583 178 23 93 chr5 199152818 199153206 -476944 + MLT1A1 LTR MaLR 4 364 -1 281 240 94 81 chr5 199153206 199153399 -476751 + L1M4 LINE L1 2763 2965 -3181 2784 252 103 38 chr5 199153425 199154369 -475781 + L1 LINE L1 2 1006 -5135 1581 155 40 17 chr5 199154385 199154681 -475469 + L1 LINE L1 3805 4107 -2103 1104 210 57 28 chr5 199154682 199155024 -475126 - MSTD LTR MaLR 0 396 3 1462 188 63 10 chr5 199155042 199155425 -474725 + L1MA10 LINE L1 2949 3351 -2795 599 161 0 0 chr5 199155426 199155519 -474631 - Tigger7 DNA MER2_type -2 2585 2493 * 1015 236 6 0 chr5 199155517 199155699 -474451 - Tigger7 DNA MER2_type -2302 185 3 8500 190 55 67 chr5 199156224 199156489 -473661 + L1MA10 LINE L1 3323 3590 -2744 2430 83 0 3 chr5 199156489 199156801 -473349 + AluY SINE Alu 1 311 0 8500 190 55 67 chr5 199156801 199157274 -472876 + L1MA10 LINE L1 3590 4067 -2267 5416 165 18 13 chr5 199157274 199158173 -471977 - MER4D LTR ERV1 0 903 1 8500 190 55 67 chr5 199158173 199158871 -471279 + L1MA10 LINE L1 4067 4772 -1562 644 88 0 0 chr5 199158871 199158951 -471199 - MADE1 DNA Mariner 0 80 1 8500 190 55 67 chr5 199158951 199160403 -469747 + L1MA10 LINE L1 4772 6145 -189 408 20 0 0 chr5 199160403 199160452 -469698 + (CA)n Simple_repeat Simple_repeat 2 50 0 8500 190 55 67 chr5 199160452 199160619 -469531 + L1MA10 LINE L1 6145 6313 -21 6062 191 13 5 chr5 199160687 199161949 -468201 - L1PA15-16 LINE L1 -2742 4107 2835 465 305 83 63 chr5 199161954 199162668 -467482 + L1M4 LINE L1 3710 4437 -1709 3352 267 41 15 chr5 199163119 199164766 -465384 + L1M3b LINE L1 818 2184 -4166 32748 111 12 58 chr5 199164777 199171100 -459050 + L1PA7 LINE L1 12 6141 -13 2398 62 0 10 chr5 199171102 199171393 -458757 - AluY SINE Alu -23 288 1 3525 218 64 15 chr5 199171410 199172502 -457648 + L1M3b LINE L1 2167 3312 -3038 2890 178 17 14 chr5 199172502 199173076 -457074 + L1M3b LINE L1 3660 4235 -2115 6360 186 140 30 chr5 199173076 199174585 -455565 - MER52A LTR ERV1 0 1755 1 2378 188 33 17 chr5 199174585 199174663 -455487 + L1M3b LINE L1 4232 4307 -2043 2137 91 21 7 chr5 199174663 199174950 -455200 - AluSc SINE Alu -17 292 2 2378 188 33 17 chr5 199174950 199175393 -454757 + L1M3b LINE L1 4307 4761 -1589 10442 207 38 78 chr5 199175704 199177281 -452869 + L1MA6 LINE L1 1278 2916 -4405 1581 115 9 0 chr5 199177281 199177499 -452651 - AluSc SINE Alu -8 301 82 10442 207 38 78 chr5 199177499 199177996 -452154 + L1MA6 LINE L1 2916 3431 -3890 231 36 0 0 chr5 199177996 199178024 -452126 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 10442 207 38 78 chr5 199178024 199178809 -451341 + L1MA6 LINE L1 3431 4246 -3075 2094 121 24 3 chr5 199178809 199179107 -451043 + AluSg SINE Alu 1 304 -6 10442 207 38 78 chr5 199179107 199179532 -450618 + L1MA6 LINE L1 4246 4686 -2635 1385 140 35 94 chr5 199179532 199179818 -450332 + AluSx SINE Alu 5 273 -39 10442 207 38 78 chr5 199179818 199181875 -448275 + L1MA6 LINE L1 4686 6353 -968 2322 94 17 0 chr5 199181875 199182174 -447976 - AluSx SINE Alu -8 304 1 10442 207 38 78 chr5 199182174 199182788 -447362 + L1MA6 LINE L1 6353 6990 -331 2548 126 64 17 chr5 199182788 199183200 -446950 + L1MA6 LINE L1 5853 6294 -6 1983 154 64 6 chr5 199183207 199183551 -446599 + L1MA6 LINE L1 6958 7321 0 4491 181 27 6 chr5 199183559 199184441 -445709 + L1MA7 LINE L1 4478 5378 -768 279 0 0 0 chr5 199184732 199184763 -445387 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 4368 167 56 14 chr5 199184763 199185642 -444508 + L1MA7 LINE L1 5370 6285 -6 565 288 82 28 chr5 199185689 199186131 -444019 + L1M4 LINE L1 4540 5003 -1143 220 222 0 37 chr5 199186816 199186870 -443280 + C-rich Low_complexity Low_complexity 6 57 0 207 0 0 0 chr5 199187638 199187661 -442489 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 1075 243 36 20 chr5 199189738 199190043 -440107 + L1MD2 LINE L1 3609 3918 -2228 1674 231 32 30 chr5 199190058 199190499 -439651 + L1MD2 LINE L1 5349 5790 -376 2584 186 8 13 chr5 199190735 199191203 -438947 - L1MC1 LINE L1 -2 6331 5866 1438 211 52 123 chr5 199191514 199191727 -438423 + L1MD2 LINE L1 5794 6021 -338 1934 127 69 33 chr5 199191727 199192089 -438061 - THE1C LTR MaLR 0 375 1 1438 211 52 123 chr5 199192089 199192144 -438006 + L1MD2 LINE L1 6021 6078 -281 1753 164 0 20 chr5 199192144 199192436 -437714 - AluJo SINE Alu -20 292 7 1438 211 52 123 chr5 199192436 199192520 -437630 + L1MD2 LINE L1 6078 6166 -193 198 0 0 0 chr5 199192520 199192542 -437608 + (CA)n Simple_repeat Simple_repeat 1 22 0 1438 211 52 123 chr5 199192542 199192778 -437372 + L1MD2 LINE L1 6166 6342 -17 270 81 0 0 chr5 199193652 199193689 -436461 + (TG)n Simple_repeat Simple_repeat 1 37 0 236 226 9 0 chr5 199193768 199193834 -436316 + A-rich Low_complexity Low_complexity 1 116 0 1869 136 14 3 chr5 199193967 199194254 -435896 + AluJb SINE Alu 1 290 -22 2163 93 0 23 chr5 199194469 199194790 -435360 - AluSx SINE Alu 0 314 1 2894 167 19 8 chr5 199194796 199195323 -434827 - L1MA8 LINE L1 0 7007 6475 1353 101 0 0 chr5 199195389 199195568 -434582 - AluSp SINE Alu -2 311 133 979 55 0 0 chr5 199195568 199195678 -434472 + AluSq/x SINE Alu 21 130 -182 10127 170 24 4 chr5 199195679 199197883 -432267 - L1MA8 LINE L1 -514 6493 4243 3766 282 35 33 chr5 199197865 199199314 -430836 - L1MA8 LINE L1 -5410 1453 3 * 4153 167 25 14 chr5 199199322 199200159 -429991 - L1M2 LINE L1 -3965 3244 2399 2500 228 101 31 chr5 199200232 199200952 -429198 - L1M2 LINE L1 -6438 771 1 4112 255 48 17 chr5 199200968 199202745 -427405 - L1M2 LINE L1 -4288 2819 992 * 7874 192 33 2 chr5 199202739 199204793 -425357 + L1MA7 LINE L1 3699 5813 -478 2251 93 0 28 chr5 199204848 199205170 -424980 + AluSq SINE Alu 1 313 0 248 228 35 0 chr5 199206208 199206322 -423828 + CT-rich Low_complexity Low_complexity 3 120 0 2923 141 234 40 chr5 199207501 199208663 -421487 - pTR5 LTR ERV1 0 2438 738 35 0 0 0 chr5 199208743 199208778 -421372 + AT_rich Low_complexity Low_complexity 1 35 0 1357 161 21 8 chr5 199209579 199209822 -420328 + L1MA7 LINE L1 5812 6057 -234 10446 206 30 68 chr5 199209823 199211443 -418707 + L1MA9 LINE L1 2298 3978 -2334 1821 213 31 0 chr5 199211443 199211795 -418355 + MLT1A1 LTR MaLR 1 363 -2 10446 206 30 68 chr5 199211795 199212276 -417874 + L1MA9 LINE L1 3978 4476 -1836 687 146 127 0 chr5 199212276 199212386 -417764 - FLAM_C SINE Alu -7 126 3 10446 206 30 68 chr5 199212386 199212465 -417685 + L1MA9 LINE L1 4476 4556 -1756 1024 149 0 53 chr5 199212465 199212681 -417469 + AluJo SINE Alu 105 310 0 10446 206 30 68 chr5 199212681 199213903 -416247 + L1MA9 LINE L1 4556 5748 -564 230 344 54 11 chr5 199213912 199214005 -416145 + L1M3c LINE L1 7 103 -6038 1020 209 88 15 chr5 199214585 199214848 -415302 + L1MA9 LINE L1 5993 6274 -38 3608 149 47 2 chr5 199215089 199215644 -414506 - LTR19B LTR ERV1 0 580 1 1082 160 25 70 chr5 199215645 199215889 -414261 - LTR19B-int LTR ERV1 -1 5585 5353 * 3656 121 2 9 chr5 199215877 199216415 -413735 - LTR19B-int LTR ERV1 -335 5251 4718 * 4394 85 5 0 chr5 199216410 199216989 -413161 - LTR19B-int LTR ERV1 -1086 4500 3919 2466 79 0 19 chr5 199216990 199217308 -412842 - AluSp SINE Alu -1 312 1 600 113 0 0 chr5 199217318 199217398 -412752 - AluY SINE Alu -16 295 216 34 42 0 0 chr5 199268568 199268616 -361534 + AT_rich Low_complexity Low_complexity 1 48 0 721 131 0 83 chr5 199269285 199269430 -360720 + FLAM_C SINE Alu 1 133 0 266 275 87 47 chr5 199269501 199269650 -360500 + HAL1b LINE L1 742 896 -452 446 300 175 36 chr5 199269966 199270589 -359561 - L2 LINE L2 0 3313 2562 320 285 92 15 chr5 199270801 199270931 -359219 + L2 LINE L2 1066 1205 -2109 1312 283 50 41 chr5 199271146 199271386 -358764 + MLT1H1 LTR MaLR 1 237 -318 1809 170 42 25 chr5 199271386 199271744 -358406 - THE1B LTR MaLR 0 364 1 11023 106 18 8 chr5 199271744 199273308 -356842 - THE1B-int LTR MaLR 0 1580 1 1994 142 42 36 chr5 199273308 199273668 -356482 - THE1B LTR MaLR 0 364 3 1312 283 50 41 chr5 199273668 199273962 -356188 + MLT1H1 LTR MaLR 236 542 -13 266 274 0 14 chr5 199273972 199274045 -356105 + MLT1H1-int LTR MaLR 26 97 -1274 813 174 75 0 chr5 199274348 199274509 -355641 - LTR64 LTR ERVK 0 558 386 2362 94 55 0 chr5 199274511 199274872 -355278 + L1PA14 LINE L1 5781 6161 0 2220 114 0 3 chr5 199275007 199275313 -354837 + AluSq SINE Alu 1 305 -8 566 330 85 47 chr5 199275874 199276355 -353795 + L2 LINE L2 2780 3271 -1 918 314 48 40 chr5 199277478 199277873 -352277 + MLT1E LTR MaLR 22 419 -174 612 310 38 51 chr5 199277974 199278290 -351860 + L1MEd LINE L1 347 658 -5461 227 278 49 56 chr5 199278822 199278966 -351184 + MLT2E LTR ERVL 480 622 -6 267 243 194 0 chr5 199279114 199279217 -350933 - L2 LINE L2 -871 2443 2321 239 257 115 44 chr5 199279348 199279461 -350689 + MER65A LTR ERV1 2 122 -323 328 304 58 58 chr5 199279599 199279859 -350291 + MER65A LTR ERV1 186 445 0 236 350 8 0 chr5 199279865 199279982 -350168 - L1M4 LINE L1 -2505 3641 3524 1165 289 70 14 chr5 199280146 199280806 -349344 + L2 LINE L2 2616 3309 -4 538 233 16 31 chr5 199280806 199280999 -349151 + L1M4 LINE L1 3794 3983 -2163 180 191 88 44 chr5 199281085 199281153 -348997 - L3 LINE CR1 -892 685 615 189 260 219 0 chr5 199281917 199282013 -348137 + MIR SINE MIR 80 196 -66 307 306 132 7 chr5 199282273 199282417 -347733 - MIR3 SINE MIR -14 194 33 2166 129 0 0 chr5 199282626 199282936 -347214 + AluSg SINE Alu 1 310 0 181 222 28 0 chr5 199283053 199283089 -347061 - L3 LINE CR1 -1534 43 7 2341 143 97 8 chr5 199283566 199283959 -346191 + MSTA LTR MaLR 1 428 0 7587 212 72 17 chr5 199283961 199285458 -344692 + MSTA-int LTR MaLR 3 1580 0 2481 106 116 10 chr5 199285458 199285845 -344305 + MSTA LTR MaLR 1 428 0 1282 203 97 123 chr5 199286083 199286606 -343544 + MLT1F1 LTR MaLR 56 567 0 433 293 28 17 chr5 199286785 199286966 -343184 + MLT1J1 LTR MaLR 1 183 -263 849 266 177 51 chr5 199287257 199287707 -342443 - MLT1G1 LTR MaLR -32 535 36 728 173 9 0 chr5 199287707 199287817 -342333 + AluSq/x SINE Alu 2 112 -201 3223 99 52 0 chr5 199287817 199288203 -341947 + MLT2A1 LTR ERVL 1 412 -32 474 18 0 0 chr5 199288203 199288258 -341892 + (TA)n Simple_repeat Simple_repeat 2 56 0 3223 99 52 0 chr5 199288258 199288293 -341857 + MLT2A1 LTR ERVL 412 444 0 22861 73 4 3 chr5 199288293 199291158 -338992 + HERVL-A1 LTR ERVL 1 2868 -2786 198 0 0 0 chr5 199291702 199291724 -338426 + (T)n Simple_repeat Simple_repeat 1 22 0 253 293 204 0 chr5 199292151 199292342 -337808 - L1MC5 LINE L1 -36 7925 7696 2126 108 14 10 chr5 199293252 199293547 -336603 + AluY SINE Alu 1 296 -15 182 273 36 0 chr5 199294190 199294245 -335905 + L2 LINE L2 2446 2502 -812 2560 47 23 0 chr5 199294436 199294737 -335413 - AluY SINE Alu -3 308 1 632 220 23 0 chr5 199295660 199295792 -334358 - MIR SINE MIR -84 178 44 23 33 0 0 chr5 199297667 199297697 -332453 + AT_rich Low_complexity Low_complexity 1 30 0 252 271 0 0 chr5 199297992 199298062 -332088 - L1M4 LINE L1 -709 5465 5396 265 288 25 17 chr5 199298305 199298423 -331727 - L1P LINE L1 -1099 5047 4929 936 283 38 51 chr5 199298513 199299142 -331008 - L1M4 LINE L1 -2527 3619 2999 1542 181 3 35 chr5 199299155 199299465 -330685 + L1PB4 LINE L1 5833 6132 -24 278 200 30 89 chr5 199299503 199299605 -330545 - L1M4 LINE L1 -3171 2975 2881 2229 109 0 3 chr5 199299605 199299909 -330241 - AluSx SINE Alu -9 303 1 278 200 30 89 chr5 199299909 199299941 -330209 - L1M4 LINE L1 -3265 2881 2849 229 241 0 0 chr5 199300218 199300272 -329878 + LTR41 LTR ERVL 719 772 -1 3010 123 9 2 chr5 199300576 199301008 -329142 + MER1A DNA MER1_type 56 490 -39 721 226 0 0 chr5 199301021 199301145 -329005 - FLAM_C SINE Alu -18 125 2 708 139 28 0 chr5 199301179 199301287 -328863 + AluJb SINE Alu 194 304 -8 239 376 65 29 chr5 199301962 199302132 -328018 - MIR SINE MIR -75 187 12 1053 234 54 30 chr5 199302200 199302481 -327669 - MER21B LTR ERV1 -74 857 501 804 251 0 6 chr5 199302482 199302657 -327493 - FRAM SINE Alu -10 166 1 237 265 136 19 chr5 199303825 199303987 -326163 - L1ME4a LINE L1 -11 6110 5930 1824 155 16 20 chr5 199304089 199304393 -325757 - AluSx SINE Alu -9 303 1 2028 128 29 6 chr5 199304514 199304857 -325293 + L1MA8 LINE L1 5939 6289 -2 289 238 156 82 chr5 199305573 199305695 -324455 - MIR SINE MIR -87 175 45 327 49 0 0 chr5 199306889 199306930 -323220 + (GA)n Simple_repeat Simple_repeat 1 41 0 23 33 0 0 chr5 199307350 199307380 -322770 + AT_rich Low_complexity Low_complexity 1 30 0 40 0 0 0 chr5 199308683 199308723 -321427 + AT_rich Low_complexity Low_complexity 1 40 0 1412 208 6 43 chr5 199308737 199309110 -321040 - AluJb SINE Alu 0 361 1 636 276 113 9 chr5 199310266 199310487 -319663 + MIR SINE MIR 2 245 -17 21 0 0 0 chr5 199311199 199311220 -318930 + AT_rich Low_complexity Low_complexity 1 21 0 207 203 47 31 chr5 199311453 199311517 -318633 + (GGGTG)n Simple_repeat Simple_repeat 1 65 0 242 284 124 65 chr5 199311747 199311916 -318234 - MIR SINE MIR -75 187 9 7325 116 24 16 chr5 199311971 199313034 -317116 - MER11C LTR ERVK 0 1071 1 2729 232 79 41 chr5 199313051 199313335 -316815 - MER21B LTR ERV1 -58 805 533 1784 164 0 16 chr5 199313335 199313639 -316511 - AluJo SINE Alu -13 299 1 2729 232 79 41 chr5 199313639 199313949 -316201 - MER21B LTR ERV1 -330 533 173 2018 146 0 3 chr5 199313949 199314243 -315907 + AluSq SINE Alu 1 293 -20 2729 232 79 41 chr5 199314243 199314405 -315745 - MER21B LTR ERV1 -690 173 19 301 307 0 0 chr5 199314427 199314502 -315648 - MER21B LTR ERV1 -773 90 16 1615 205 0 7 chr5 199314502 199314799 -315351 - AluJo SINE Alu -13 299 5 1549 181 17 54 chr5 199314802 199315151 -314999 + MLT1D LTR MaLR 162 497 -8 1576 196 10 14 chr5 199315178 199315305 -314845 + AluJb SINE Alu 10 136 -176 2127 100 35 0 chr5 199315305 199315594 -314556 + AluSg1 SINE Alu 1 299 -10 1576 196 10 14 chr5 199315594 199315757 -314393 + AluJb SINE Alu 136 299 -13 497 258 92 48 chr5 199315757 199316085 -314065 - L2 LINE L2 -216 3097 2758 417 248 126 30 chr5 199316190 199316388 -313762 - MIR SINE MIR -32 230 14 432 0 0 0 chr5 199316654 199316702 -313448 + (TA)n Simple_repeat Simple_repeat 1 48 0 509 250 37 98 chr5 199318810 199318894 -311256 - MIR SINE MIR -29 233 145 2221 118 0 10 chr5 199318894 199319207 -310943 - AluSx SINE Alu -2 310 1 509 250 37 98 chr5 199319207 199319366 -310784 - MIR SINE MIR -117 145 5 281 335 11 62 chr5 199319708 199319884 -310266 + MIR SINE MIR 13 179 -83 1801 134 67 20 chr5 199320287 199320585 -309565 + AluSx SINE Alu 1 312 0 1046 126 33 22 chr5 199320945 199321128 -309022 - MER53 DNA DNA 0 189 5 198 71 0 0 chr5 199321280 199321308 -308842 + (GA)n Simple_repeat Simple_repeat 1 28 0 1862 143 37 66 chr5 199321338 199321715 -308435 - MLT2D LTR ERVL -48 366 1 183 314 14 14 chr5 199322925 199322995 -307155 - MIR SINE MIR -13 249 180 846 154 31 0 chr5 199324937 199325067 -305083 + AluJb SINE Alu 158 291 -21 264 30 0 0 chr5 199325506 199325539 -304611 + (CA)n Simple_repeat Simple_repeat 2 34 0 363 289 84 31 chr5 199325775 199326000 -304150 - L1ME LINE L1 -474 5716 5480 2985 234 70 13 chr5 199326155 199327102 -303048 - L1ME LINE L1 -2874 3341 2341 518 222 12 37 chr5 199327099 199327261 -302889 - L1MB7 LINE L1 0 6184 6027 * 519 196 118 20 chr5 199327253 199327406 -302744 - L1ME LINE L1 -4000 2396 2229 1095 134 25 17 chr5 199327410 199327618 -302532 - MLT2A2 LTR ERVL 0 453 293 3086 161 102 11 chr5 199327902 199328041 -302109 - LTR9 LTR ERV1 0 612 487 189 0 0 0 chr5 199328041 199328062 -302088 + (GA)n Simple_repeat Simple_repeat 2 22 0 3086 161 102 11 chr5 199328062 199328482 -301668 - LTR9 LTR ERV1 -125 487 2 1135 279 45 94 chr5 199328966 199329162 -300988 - LTR19C LTR ERV1 0 779 575 2651 84 63 21 chr5 199329162 199329592 -300558 - LTR7 LTR ERV1 -2 448 1 1135 279 45 94 chr5 199329592 199330032 -300118 - LTR19C LTR ERV1 -204 575 7 241 204 56 0 chr5 199330473 199330527 -299623 - MLT1E3 LTR MaLR -454 170 114 189 261 72 14 chr5 199330621 199330690 -299460 - L2 LINE L2 -32 3281 3209 185 310 48 61 chr5 199330736 199330965 -299185 - L2 LINE L2 -211 3061 2836 1659 185 0 16 chr5 199331326 199331634 -298516 - AluJb SINE Alu -9 303 1 2331 98 3 0 chr5 199331720 199332016 -298134 - AluSp SINE Alu -16 297 1 249 33 0 0 chr5 199332042 199332072 -298078 + (TA)n Simple_repeat Simple_repeat 1 30 0 2287 97 0 0 chr5 199332074 199332362 -297788 - AluSg SINE Alu -18 292 5 1046 281 76 29 chr5 199333778 199334436 -295714 + L1ME3A LINE L1 5259 5947 -223 31 44 0 0 chr5 199334834 199334879 -295271 + AT_rich Low_complexity Low_complexity 1 45 0 2164 129 29 45 chr5 199334963 199335344 -294806 - THE1C LTR MaLR 0 375 1 258 32 0 0 chr5 199336807 199336838 -293312 + (TG)n Simple_repeat Simple_repeat 1 31 0 203 315 171 0 chr5 199337373 199337484 -292666 - MIR SINE MIR -75 187 58 209 253 88 22 chr5 199338091 199338182 -291968 - L2 LINE L2 -1 3271 3175 2012 286 171 17 chr5 199339457 199340702 -289448 + L1MC4a LINE L1 5419 6901 -907 1962 151 15 59 chr5 199342572 199342962 -287188 + THE1C LTR MaLR 3 375 0 306 273 0 13 chr5 199344206 199344283 -285867 + CT-rich Low_complexity Low_complexity 5 80 0 286 239 33 43 chr5 199344740 199344832 -285318 - MER69 DNA AcHobo -13 2513 2423 5356 260 87 31 chr5 199344834 199347088 -283062 + L1MEc LINE L1 35 2414 -3982 588 183 36 29 chr5 199347194 199347331 -282819 + AluSg/x SINE Alu 159 296 -16 1012 245 68 28 chr5 199349114 199349571 -280579 - L1MC5 LINE L1 -35 7926 7452 574 157 9 65 chr5 199350178 199350286 -279864 + MER8 DNA MER2_type 4 105 -134 1063 138 0 0 chr5 199350297 199350442 -279708 + AluJb SINE Alu 130 274 -38 1655 201 0 0 chr5 199350784 199351068 -279082 + AluJb SINE Alu 1 284 -28 291 28 0 0 chr5 199351069 199351105 -279045 + (CA)n Simple_repeat Simple_repeat 2 37 0 1905 76 0 0 chr5 199351429 199351653 -278497 + AluSq SINE Alu 3 226 -87 180 0 0 0 chr5 199352546 199352566 -277584 + (T)n Simple_repeat Simple_repeat 1 20 0 873 201 42 123 chr5 199353377 199353710 -276440 + L1MC4 LINE L1 6718 7069 -938 233 224 122 20 chr5 199353787 199353885 -276265 + L1MC5 LINE L1 7799 7906 -55 351 144 0 5 chr5 199354193 199354261 -275889 - MSTD LTR MaLR -1 395 339 427 174 0 20 chr5 199354261 199354359 -275791 + GA-rich Low_complexity Low_complexity 3 98 0 206 146 42 0 chr5 199354478 199354526 -275624 + GA-rich Low_complexity Low_complexity 3 52 0 1641 172 88 22 chr5 199354527 199354847 -275303 - MSTD LTR MaLR -55 341 1 1874 149 0 4 chr5 199355983 199356264 -273886 + AluSq SINE Alu 1 280 -33 225 0 0 0 chr5 199356265 199356290 -273860 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 458 151 27 0 chr5 199356495 199356568 -273582 + AluJ/FLAM SINE Alu 2 76 -236 1759 134 0 11 chr5 199356568 199356829 -273321 + AluSq SINE Alu 46 303 -10 1892 147 10 10 chr5 199357140 199357447 -272703 + AluSx SINE Alu 3 309 -3 2069 118 4 0 chr5 199358190 199358469 -271681 + AluSg SINE Alu 1 280 -30 2300 90 10 0 chr5 199359268 199359567 -270583 - AluSp SINE Alu -9 304 3 2211 112 0 0 chr5 199359628 199359923 -270227 + AluSg1 SINE Alu 1 295 -14 1423 138 40 46 chr5 199360616 199360920 -269230 + AluY SINE Alu 1 302 -9 615 156 83 0 chr5 199361048 199361157 -268993 + MLT1D LTR MaLR 1 118 -387 900 209 90 9 chr5 199361265 199361476 -268674 + MLT1D LTR MaLR 276 503 -2 2199 124 0 3 chr5 199361507 199361813 -268337 + AluSx SINE Alu 1 305 -7 1797 164 14 0 chr5 199361990 199362282 -267868 - AluSx SINE Alu -15 297 2 2089 105 7 7 chr5 199363069 199363374 -266776 - AluSq SINE Alu 0 305 1 217 283 104 19 chr5 199364045 199364151 -265999 + L2 LINE L2 3158 3272 0 514 309 27 18 chr5 199364457 199364680 -265470 + MIR SINE MIR 2 226 -36 1303 124 38 19 chr5 199364802 199365012 -265138 - AluJo SINE Alu -98 214 1 217 189 67 44 chr5 199365419 199365509 -264641 + (TGGG)n Simple_repeat Simple_repeat 3 94 0 553 258 88 13 chr5 199366170 199366329 -263821 + AluJo SINE Alu 121 291 -21 2154 116 0 3 chr5 199366331 199366625 -263525 + AluSx SINE Alu 1 293 -19 21 0 0 0 chr5 199367057 199367078 -263072 + AT_rich Low_complexity Low_complexity 1 21 0 803 326 95 29 chr5 199367203 199367688 -262462 + L1MDb LINE L1 104 620 -5789 300 321 61 28 chr5 199367864 199368076 -262074 + L1MDb LINE L1 408 626 -5783 376 221 70 78 chr5 199369154 199369501 -260649 - HSREP522 Satellite telomeric -112 344 1 528 235 46 65 chr5 199369528 199369950 -260200 - HSREP522 Satellite telomeric -436 413 1 337 183 0 14 chr5 199372318 199372389 -257761 - L1 LINE L1 -3308 2838 2769 186 71 0 0 chr5 199372395 199372423 -257727 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1886 125 32 4 chr5 199372423 199372699 -257451 - AluSx SINE Alu -27 285 2 2089 235 14 8 chr5 199372699 199373193 -256957 - L1 LINE L1 -2203 3943 3447 1773 234 16 0 chr5 199373195 199373566 -256584 - MSTB LTR MaLR -49 377 1 3247 195 24 6 chr5 199373566 199374187 -255963 - MSTB-int LTR MaLR 0 1651 1020 4889 253 24 23 chr5 199374195 199375772 -254378 - L1PA15-16 LINE L1 -2702 4147 2563 2206 119 0 0 chr5 199375772 199376067 -254083 + AluSx SINE Alu 1 295 -17 4889 253 24 23 chr5 199376067 199376678 -253472 - L1PA15-16 LINE L1 -4286 2563 1954 329 326 113 21 chr5 199376762 199377044 -253106 + L1ME LINE L1 5354 5661 -460 39 74 0 0 chr5 199377185 199377266 -252884 + AT_rich Low_complexity Low_complexity 1 81 0 1284 95 58 0 chr5 199377414 199377603 -252547 + L1PA3 LINE L1 5955 6154 -1 27 0 0 0 chr5 199377603 199377630 -252520 + AT_rich Low_complexity Low_complexity 1 27 0 1512 173 35 25 chr5 199377637 199377921 -252229 - AluJo SINE Alu -15 287 1 839 129 27 97 chr5 199378075 199378261 -251889 + AluSx SINE Alu 3 175 -137 341 129 0 48 chr5 199378357 199378419 -251731 + AluSp/q SINE Alu 237 295 -8 22 0 0 0 chr5 199378421 199378443 -251707 + AT_rich Low_complexity Low_complexity 1 22 0 200 246 0 43 chr5 199378892 199378961 -251189 + (TTGGGG)n Simple_repeat Simple_repeat 1 66 0 1324 49 6 0 chr5 199379032 199379194 -250956 - AluSg SINE Alu -147 163 1 2372 58 7 0 chr5 199379225 199379534 -250616 - AluY SINE Alu 0 311 1 1458 73 10 0 chr5 199380420 199380612 -249538 + AluY SINE Alu 1 194 -117 207 0 0 0 chr5 199380806 199380829 -249321 + (CATTT)n Simple_repeat Simple_repeat 3 25 0 234 134 41 62 chr5 199381280 199381377 -248773 + (CACAA)n Simple_repeat Simple_repeat 2 96 0 263 239 6 51 chr5 199381513 199381689 -248461 + (CAAA)n Simple_repeat Simple_repeat 4 171 0 220 205 64 26 chr5 199383572 199383728 -246422 + (CACAA)n Simple_repeat Simple_repeat 5 166 0 222 91 0 0 chr5 199384191 199384224 -245926 + (CAT)n Simple_repeat Simple_repeat 3 35 0 1161 235 103 13 chr5 199387012 199387323 -242827 - MER44D DNA MER2_type 0 609 1 832 225 8 154 chr5 199387780 199388136 -242014 - MLT1A1 LTR MaLR 0 365 62 258 204 31 20 chr5 199389220 199389318 -240832 + (CAA)n Simple_repeat Simple_repeat 3 101 0 209 197 28 42 chr5 199389551 199389622 -240528 + (CACAG)n Simple_repeat Simple_repeat 2 71 0 2067 79 0 4 chr5 199389950 199390216 -239934 - AluSq SINE Alu -48 265 1 846 123 0 0 chr5 199390224 199390346 -239804 - FLAM_C SINE Alu -7 136 15 1475 80 0 24 chr5 199390384 199390597 -239553 - AluY SINE Alu -2 309 102 1761 118 17 28 chr5 199390692 199390981 -239169 + AluSx SINE Alu 1 286 -26 629 148 10 0 chr5 199391118 199391219 -238931 - FRAM SINE Alu -73 103 2 1198 100 0 59 chr5 199391618 199391838 -238312 + AluSx SINE Alu 1 207 -105 479 322 35 15 chr5 199394021 199394223 -235927 - L1M4 LINE L1 -3430 2716 2511 396 211 34 39 chr5 199394229 199394366 -235784 - L1MC2 LINE L1 -1 6343 6195 352 237 0 0 chr5 199394853 199394929 -235221 - HAL1 LINE L1 -870 1637 1562 720 244 142 14 chr5 199395130 199395405 -234745 + L1 LINE L1 4535 4844 -1302 456 313 37 11 chr5 199395466 199395769 -234381 - L1ME3A LINE L1 -204 5966 5656 236 275 25 12 chr5 199396604 199396684 -233466 + (CA)n Simple_repeat Simple_repeat 1 81 0 234 143 0 24 chr5 199396843 199396885 -233265 + MIR3 SINE MIR 137 177 -31 21 36 0 0 chr5 199397417 199397445 -232705 + GC_rich Low_complexity Low_complexity 1 28 0 1234 238 73 15 chr5 199398300 199398692 -231458 + L1MC4 LINE L1 6565 7068 -825 482 234 76 27 chr5 199398734 199398918 -231232 + L1MC4 LINE L1 7218 7410 -632 833 139 265 19 chr5 199398973 199399188 -230962 - AluJo SINE Alu -44 268 1 729 284 11 29 chr5 199399190 199399468 -230682 + L1MC4 LINE L1 7769 8041 -1 246 244 122 32 chr5 199399483 199399606 -230544 + L1ME4a LINE L1 5977 6110 -11 1111 225 101 34 chr5 199400054 199400548 -229602 + L1MC4 LINE L1 6493 6952 -856 243 0 0 0 chr5 199400548 199400575 -229575 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1111 225 101 34 chr5 199400575 199400954 -229196 + L1MC4 LINE L1 6952 7435 -373 417 254 6 3 chr5 199400954 199401075 -229075 + AluJ/FLAM SINE Alu 1 74 -228 579 190 116 41 chr5 199401075 199401294 -228856 + L1MC4 LINE L1 7607 7937 -105 620 187 114 48 chr5 199401294 199401332 -228818 + MER63A DNA MER1_type 1 35 -1653 2519 52 3 0 chr5 199401332 199401638 -228512 + AluY SINE Alu 1 307 -4 620 187 114 48 chr5 199401638 199401765 -228385 + MER63A DNA MER1_type 35 177 -33 1008 219 27 0 chr5 199401896 199402115 -228035 - MLT1A1 LTR MaLR 0 365 141 771 165 0 30 chr5 199402115 199402248 -227902 - FLAM_C SINE Alu -4 129 1 2137 92 7 0 chr5 199402268 199402560 -227590 - AluSc SINE Alu -5 304 11 776 145 25 57 chr5 199402571 199402730 -227420 - MLT1A1 LTR MaLR -211 154 1 1298 127 74 37 chr5 199404180 199404424 -225726 - MER52C LTR ERV1 0 1278 1026 1911 158 87 27 chr5 199404524 199404892 -225258 - MER52C LTR ERV1 -234 1044 655 6661 210 95 44 chr5 199404956 199405579 -224571 + L1MC/D LINE L1 2020 2610 -3605 1578 146 7 52 chr5 199405579 199405887 -224263 - AluJo SINE Alu -8 304 11 6661 210 95 44 chr5 199405887 199406702 -223448 + L1MC/D LINE L1 2610 3382 -2833 1734 171 13 3 chr5 199406702 199407007 -223143 + AluSx SINE Alu 1 308 -4 6661 210 95 44 chr5 199407007 199408048 -222102 + L1MC/D LINE L1 3382 4589 -1626 4377 163 165 31 chr5 199408056 199409090 -221060 - MER52C LTR ERV1 -105 1173 1 607 301 101 4 chr5 199409182 199409458 -220692 + L1MC/D LINE L1 5581 5883 -1994 803 161 8 0 chr5 199410403 199410533 -219617 + FLAM_C SINE Alu 2 132 -1 21 0 0 0 chr5 199410533 199410554 -219596 + AT_rich Low_complexity Low_complexity 1 21 0 2774 244 88 35 chr5 199411501 199412620 -217530 + L1MCb LINE L1 1 1179 -4866 649 144 144 17 chr5 199412623 199412741 -217409 + AluJo/FLAM SINE Alu 1 133 -169 1905 152 0 0 chr5 199412743 199413040 -217110 + AluSx SINE Alu 2 298 -14 22 0 0 0 chr5 199413049 199413071 -217079 + AT_rich Low_complexity Low_complexity 1 22 0 644 161 20 146 chr5 199413071 199413270 -216880 + L1MCb LINE L1 1171 1344 -5220 1361 184 30 19 chr5 199413270 199413541 -216609 + AluJo SINE Alu 1 274 -38 1218 223 57 45 chr5 199413557 199413961 -216189 + L1MCb LINE L1 1405 1813 -4751 688 138 31 31 chr5 199413950 199414080 -216070 + L1MA9 LINE L1 3797 3926 -2220 * 4172 163 74 34 chr5 199414086 199414165 -215985 + L1MA9 LINE L1 4078 4152 -2160 1817 167 0 3 chr5 199414165 199414470 -215680 + AluJb SINE Alu 6 309 -3 4172 163 74 34 chr5 199414470 199414620 -215530 + L1MA9 LINE L1 4152 4295 -2017 1913 112 59 0 chr5 199414620 199414906 -215244 - AluSg SINE Alu -6 304 2 4172 163 74 34 chr5 199414906 199415866 -214284 + L1MA9 LINE L1 4295 6274 -38 3449 211 126 25 chr5 199415854 199416261 -213889 + L1M1 LINE L1 1734 2098 -4328 * 1641 184 3 16 chr5 199416261 199416565 -213585 + AluJo SINE Alu 1 300 -12 3449 211 126 25 chr5 199416565 199416617 -213533 + L1M1 LINE L1 2098 2143 -4283 746 188 0 23 chr5 199416617 199416745 -213405 - FLAM_C SINE Alu -8 125 1 3449 211 126 25 chr5 199416745 199418142 -212008 + L1M1 LINE L1 2143 3765 -2661 1857 138 7 7 chr5 199418142 199418447 -211703 + AluJb SINE Alu 1 305 -7 1703 204 28 46 chr5 199418447 199418608 -211542 + L1M1 LINE L1 4127 4289 -2137 817 167 0 0 chr5 199418608 199418734 -211416 + FLAM_C SINE Alu 1 126 -7 297 0 0 0 chr5 199418735 199418768 -211382 + (CA)n Simple_repeat Simple_repeat 2 34 0 1703 204 28 46 chr5 199418768 199419056 -211094 + L1M1 LINE L1 4288 4572 -1854 2153 114 0 0 chr5 199419064 199419371 -210779 - AluSx SINE Alu 0 312 6 1267 188 0 5 chr5 199419395 199419619 -210531 - MER54A LTR ERVL 0 901 679 1089 181 0 19 chr5 199419860 199420065 -210085 - MER54B LTR ERVL -111 682 482 2997 231 69 24 chr5 199420197 199421139 -209011 + L1M1 LINE L1 4557 5540 -886 1207 209 47 14 chr5 199421147 199421424 -208726 + AluJo SINE Alu 27 312 0 3571 189 48 19 chr5 199421424 199421466 -208684 + L1MC2 LINE L1 5287 5326 -1018 1817 145 3 3 chr5 199421466 199421755 -208395 + AluJo SINE Alu 6 294 -18 3571 189 48 19 chr5 199421755 199422714 -207436 + L1MC2 LINE L1 5326 6334 -10 180 164 18 55 chr5 199423105 199423160 -206990 - L2 LINE L2 -39 3233 3181 677 256 122 26 chr5 199423641 199423953 -206197 + L2 LINE L2 2310 2651 -663 180 219 0 0 chr5 199424518 199424559 -205591 - L2 LINE L2 -14 3258 3218 344 253 48 18 chr5 199424696 199424838 -205312 - MER5A DNA MER1_type -8 170 27 985 184 118 94 chr5 199426061 199426349 -203801 + AluJo SINE Alu 1 295 -7 772 265 35 18 chr5 199426416 199426899 -203251 + MER90 LTR ERV1 1 566 -48 234 132 129 0 chr5 199428528 199428587 -201563 + L1MC/D LINE L1 5400 5465 -879 1789 178 17 3 chr5 199428638 199428930 -201220 - AluJb SINE Alu -12 300 5 4909 158 63 60 chr5 199429388 199430025 -200125 + L1MCa LINE L1 19 662 -5764 2029 119 43 0 chr5 199430025 199430303 -199847 + AluSx SINE Alu 10 299 -13 4909 158 63 60 chr5 199430303 199430809 -199341 + L1MCa LINE L1 662 1165 -5261 1072 104 0 0 chr5 199430810 199430944 -199206 + AluSg SINE Alu 1 134 -176 7677 42 0 0 chr5 199430944 199431918 -198232 - L1P LINE L1 -848 5298 4325 5587 42 1 5 chr5 199431918 199432588 -197562 + L1PA5 LINE L1 5487 6154 0 1462 96 0 0 chr5 199432593 199432780 -197370 + AluSg SINE Alu 123 309 -1 1998 160 53 0 chr5 199432780 199433156 -196994 - MSTA LTR MaLR -30 398 3 2083 132 0 0 chr5 199433303 199433599 -196551 - AluSc SINE Alu -13 296 1 228 86 0 0 chr5 199435451 199435486 -194664 + (TCCCC)n Simple_repeat Simple_repeat 1 35 0 707 12 0 12 chr5 199436211 199436294 -193856 + tRNA-Leu-CTT tRNA tRNA 1 82 -3 688 0 0 0 chr5 199436625 199436698 -193452 - tRNA-Val-GTG tRNA tRNA -3 73 1 2010 163 51 0 chr5 199437473 199437848 -192302 + MSTA LTR MaLR 1 394 -34 2528 58 10 0 chr5 199437848 199438156 -191994 - AluY SINE Alu 0 311 1 318 259 5 0 chr5 199438168 199438320 -191830 - L1M1 LINE L1 -487 5818 5665 645 210 58 0 chr5 199438607 199438745 -191405 - AluJb SINE Alu 0 312 167 589 243 58 24 chr5 199438805 199439011 -191139 + MLT1A2 LTR MaLR 159 371 -3 597 232 29 0 chr5 199439360 199439498 -190652 + Tigger3(Golem) DNA MER2_type 3 144 -2885 237 241 19 0 chr5 199439558 199439612 -190538 + Tigger3(Golem) DNA MER2_type 2984 3038 0 922 219 102 62 chr5 199439824 199440148 -190002 - MER58B DNA MER1_type 0 341 5 315 223 158 43 chr5 199440684 199440823 -189327 - L1M1 LINE L1 -2388 5420 5266 25 0 0 0 chr5 199440824 199440849 -189301 + AT_rich Low_complexity Low_complexity 1 25 0 2147 128 7 0 chr5 199440947 199441243 -188907 - AluSx SINE Alu -14 298 1 277 258 34 11 chr5 199441284 199441373 -188777 + L2 LINE L2 3167 3257 -56 443 182 232 0 chr5 199441703 199441802 -188348 - FLAM_A SINE Alu -8 125 4 1636 268 48 15 chr5 199441950 199442488 -187662 - MER90 LTR ERV1 -9 566 11 350 251 181 51 chr5 199442688 199442903 -187247 - MIR SINE MIR -15 247 5 190 311 57 25 chr5 199443145 199443267 -186883 - MIR SINE MIR -21 241 116 756 245 40 75 chr5 199443630 199443671 -186479 - LTR16A LTR ERVL -6 444 403 1466 179 21 65 chr5 199443671 199443996 -186154 - AluJb SINE Alu -1 311 1 756 245 40 75 chr5 199443996 199444325 -185825 - LTR16A LTR ERVL -47 403 87 410 195 25 51 chr5 199444395 199444513 -185637 + L1ME1 LINE L1 5668 5782 -388 1186 255 80 30 chr5 199444515 199444589 -185561 + MER92B LTR ERV1 1 70 -566 3290 144 45 14 chr5 199444589 199445165 -184985 + L1PA16 LINE L1 5573 6166 0 1186 255 80 30 chr5 199445165 199445631 -184519 + MER92B LTR ERV1 70 568 -68 1715 142 4 8 chr5 199445648 199445909 -184241 - AluJb SINE Alu -52 260 1 511 156 4 25 chr5 199445939 199446172 -183978 + AluJb SINE Alu 2 306 -6 500 143 44 0 chr5 199446181 199446272 -183878 - MER5A DNA MER1_type -63 126 32 525 276 40 65 chr5 199446288 199446611 -183539 + LTR37B LTR ERV1 115 429 -39 256 279 29 52 chr5 199446904 199447040 -183110 + L1M4 LINE L1 77 209 -6333 1097 191 10 0 chr5 199447273 199447472 -182678 + AluJo SINE Alu 111 311 -1 1024 199 11 71 chr5 199447491 199447757 -182393 + LTR9 LTR ERV1 1 250 -362 878 241 67 64 chr5 199451109 199451381 -178769 + LTR19C LTR ERV1 223 493 -286 2322 96 23 0 chr5 199451381 199451683 -178467 + AluSg SINE Alu 1 309 -1 878 241 67 64 chr5 199451683 199451785 -178365 + LTR19C LTR ERV1 493 779 0 1006 176 11 0 chr5 199451788 199451975 -178175 - L1M4 LINE L1 -404 5780 5592 762 274 12 8 chr5 199452034 199452279 -177871 + L1ME1 LINE L1 5916 6161 -5 1059 150 16 10 chr5 199453028 199453221 -176929 - MLT1B LTR MaLR -188 202 9 427 200 53 0 chr5 199453509 199453604 -176546 + MIR3 SINE MIR 77 176 -32 316 111 0 0 chr5 199453875 199453920 -176230 - tRNA-Val-GTG tRNA tRNA -4 72 28 938 195 0 0 chr5 199454153 199454312 -175838 + FRAM SINE Alu 1 158 -18 361 179 0 0 chr5 199454362 199454429 -175721 - Alu SINE Alu 0 302 236 499 274 48 0 chr5 199454492 199454660 -175490 + MER110 LTR ERV1 297 472 -19 24 53 0 0 chr5 199454787 199454825 -175325 + AT_rich Low_complexity Low_complexity 1 38 0 452 342 34 59 chr5 199454839 199454962 -175188 + ERVL LTR ERVL 2442 2567 -3197 2146 119 0 13 chr5 199454962 199455264 -174886 - AluSx SINE Alu -14 298 1 452 342 34 59 chr5 199455264 199455462 -174688 + ERVL LTR ERVL 2567 2755 -3009 1431 290 43 6 chr5 199455482 199455948 -174202 + ERVL LTR ERVL 4138 4620 -1144 282 252 201 7 chr5 199456499 199456638 -173512 + LTR50 LTR ERVL 122 287 -508 834 150 13 26 chr5 199457024 199457177 -172973 - FRAM SINE Alu -4 172 22 621 141 0 0 chr5 199457186 199457278 -172872 - AluJ/FLAM SINE Alu -219 93 2 376 133 93 0 chr5 199457279 199457354 -172796 + LTR50 LTR ERVL 714 795 0 255 304 0 0 chr5 199457548 199457617 -172533 - L2 LINE L2 -3 3269 3201 1719 141 6 30 chr5 199457618 199457972 -172178 - MER4A LTR ERV1 0 664 261 484 118 32 21 chr5 199457975 199458068 -172082 - MER4A LTR ERV1 -570 94 1 22 35 0 0 chr5 199458397 199458426 -171724 + AT_rich Low_complexity Low_complexity 1 29 0 386 195 35 0 chr5 199458579 199458666 -171484 + L1MC4a LINE L1 5687 5776 -388 238 283 11 43 chr5 199458667 199458759 -171391 - MIR SINE MIR -90 118 30 2500 81 3 0 chr5 199460087 199460394 -169756 + AluSp SINE Alu 1 308 -5 1132 295 38 8 chr5 199460430 199460796 -169354 + L2 LINE L2 2434 2810 -504 650 201 4 0 chr5 199460796 199461045 -169105 + (CA)n Simple_repeat Simple_repeat 1 250 0 348 249 0 0 chr5 199461057 199461222 -168928 + (CA)n Simple_repeat Simple_repeat 1 165 0 361 340 137 12 chr5 199461313 199461642 -168508 + L2 LINE L2 2943 3312 -1 475 292 156 31 chr5 199462285 199462575 -167575 + L2 LINE L2 2170 2422 -891 261 0 0 0 chr5 199462575 199462604 -167546 + (CA)n Simple_repeat Simple_repeat 1 29 0 475 292 156 31 chr5 199462604 199463319 -166831 + L2 LINE L2 2422 3312 -1 1662 170 7 17 chr5 199463340 199463634 -166516 + AluJo SINE Alu 13 303 -9 920 158 30 0 chr5 199463635 199463768 -166382 + AluJo/FRAM SINE Alu 133 269 -43 185 277 43 0 chr5 199465375 199465422 -164728 - L2 LINE L2 -87 3185 3137 1075 168 0 17 chr5 199466702 199466875 -163275 + AluJb SINE Alu 124 293 -19 443 299 9 63 chr5 199467024 199467245 -162905 + L1MC5 LINE L1 7700 7908 -53 347 316 78 22 chr5 199467278 199467547 -162603 + L1MC4a LINE L1 5760 6043 -1765 1624 148 10 61 chr5 199467575 199467885 -162265 - AluJo SINE Alu -13 299 6 716 314 81 84 chr5 199468530 199469049 -161101 + L1MCa LINE L1 908 1427 -1474 1980 146 0 7 chr5 199469049 199469351 -160799 + AluJo SINE Alu 13 312 0 716 314 81 84 chr5 199469351 199469573 -160577 + L1MCa LINE L1 1427 1648 -1253 216 0 0 0 chr5 199469573 199469597 -160553 + (CA)n Simple_repeat Simple_repeat 2 25 0 716 314 81 84 chr5 199469597 199469628 -160522 + L1MCa LINE L1 1648 1678 -1223 261 0 0 0 chr5 199469628 199469657 -160493 + (CA)n Simple_repeat Simple_repeat 2 30 0 716 314 81 84 chr5 199469657 199469963 -160187 + L1MCa LINE L1 1678 2231 -670 2026 139 7 14 chr5 199470268 199470563 -159587 - AluSx SINE Alu -19 293 1 282 227 80 0 chr5 199470597 199470685 -159465 + L1MCa LINE L1 2476 2570 -4151 836 180 24 6 chr5 199470690 199470857 -159293 + MLT1B LTR MaLR 1 170 -220 443 158 0 0 chr5 199470849 199470925 -159225 + MLT1B LTR MaLR 315 390 0 * 226 100 0 0 chr5 199470936 199470976 -159174 + L1MCa LINE L1 2536 2575 -3965 25 0 0 0 chr5 199471056 199471081 -159069 + AT_rich Low_complexity Low_complexity 1 25 0 1042 310 52 22 chr5 199471084 199471344 -158806 + L1MCa LINE L1 2639 2890 -3650 2451 71 3 0 chr5 199471344 199471640 -158510 + AluY SINE Alu 1 297 -14 1042 310 52 22 chr5 199471640 199472098 -158052 + L1MCa LINE L1 2890 3378 -3162 22 35 0 0 chr5 199473003 199473032 -157118 + AT_rich Low_complexity Low_complexity 1 29 0 187 158 26 0 chr5 199473054 199473092 -157058 + L2 LINE L2 3111 3149 -164 286 237 31 93 chr5 199473105 199473202 -156948 + MIR SINE MIR 31 121 -141 235 143 89 0 chr5 199474656 199474712 -155438 - LTR54 LTR ERV1 -48 462 402 639 295 109 3 chr5 199474712 199475041 -155109 - L1M4 LINE L1 -1322 4824 4461 350 298 30 0 chr5 199475151 199475282 -154868 - L1M4 LINE L1 -2159 3987 3853 1884 204 36 17 chr5 199475282 199475802 -154348 + MER74A LTR ERVL 1 530 -28 868 283 27 38 chr5 199475833 199476200 -153950 - L1M4 LINE L1 -2290 3856 3494 1437 181 43 7 chr5 199476261 199476564 -153586 - L1MA7 LINE L1 -138 6153 5840 646 121 0 10 chr5 199477491 199477590 -152560 + MER4A LTR ERV1 1 98 -566 1516 126 16 95 chr5 199477630 199477947 -152203 + MER4A LTR ERV1 372 663 -1 2430 117 98 72 chr5 199477951 199478523 -151627 + MER4A-int LTR ERV1 1 686 -5912 242 54 0 27 chr5 199478606 199478643 -151507 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 2476 97 0 0 chr5 199478697 199479005 -151145 + AluSg SINE Alu 1 308 -2 618 193 68 25 chr5 199479018 199479211 -150939 + MER4A-int LTR ERV1 1266 2040 -4291 11208 106 54 13 chr5 199479224 199480465 -149685 + MER4A-int LTR ERV1 4625 5814 -784 2124 132 7 0 chr5 199480465 199480760 -149390 + AluSx SINE Alu 1 297 -15 354 45 0 0 chr5 199480760 199480804 -149346 + (TTA)n Simple_repeat Simple_repeat 3 46 0 11208 106 54 13 chr5 199480804 199481432 -148718 + MER4A-int LTR ERV1 5813 6571 -27 481 146 0 12 chr5 199481432 199481514 -148636 + MER4A LTR ERV1 18 98 -566 1745 151 169 20 chr5 199481514 199481864 -148286 + MER4A LTR ERV1 261 662 -2 240 299 0 0 chr5 199483055 199483122 -147028 - L2 LINE L2 -2 3311 3245 494 310 123 45 chr5 199483237 199484027 -146123 - L2 LINE L2 -212 3101 2238 252 232 0 0 chr5 199484349 199484405 -145745 + GA-rich Low_complexity Low_complexity 1 56 0 304 282 153 36 chr5 199485090 199485181 -144969 - L2 LINE L2 -62 3251 3172 1564 172 38 14 chr5 199485181 199485471 -144679 + AluJo SINE Alu 1 297 -15 304 282 153 36 chr5 199485471 199485870 -144280 - L2 LINE L2 -141 3172 2704 1275 153 15 0 chr5 199486293 199486489 -143661 + AluJo SINE Alu 103 301 -11 218 284 109 77 chr5 199486601 199486784 -143366 - MIR SINE MIR -57 205 17 382 277 13 65 chr5 199487124 199487279 -142871 + MLT1F1 LTR MaLR 94 240 -327 640 243 12 35 chr5 199487302 199487471 -142679 + MLT1F1 LTR MaLR 403 567 0 1577 176 47 17 chr5 199487892 199488188 -141962 + AluSx SINE Alu 1 305 -7 2503 47 0 7 chr5 199488795 199489094 -141056 + AluY SINE Alu 1 297 -14 453 50 0 0 chr5 199490528 199490588 -139562 + (TTTC)n Simple_repeat Simple_repeat 4 63 0 1543 169 57 43 chr5 199490595 199490896 -139254 - AluJb SINE Alu -7 305 1 272 255 59 20 chr5 199491797 199491899 -138251 - MIR SINE MIR -55 207 102 1731 164 17 20 chr5 199492832 199493162 -136988 + AluJb SINE Alu 1 312 0 581 186 83 64 chr5 199493426 199493582 -136568 + AluJo SINE Alu 124 282 -30 911 116 0 0 chr5 199493622 199493743 -136407 + FLAM_C SINE Alu 16 136 -7 355 239 11 0 chr5 199494186 199494274 -135876 + MIR SINE MIR 86 174 -88 247 408 0 0 chr5 199495277 199495446 -134704 + (CTGGGG)n Simple_repeat Simple_repeat 6 174 0 203 424 0 0 chr5 199495692 199495862 -134288 + (CTGGGG)n Simple_repeat Simple_repeat 6 175 0 451 281 59 7 chr5 199496881 199497034 -133116 - MIR3 SINE MIR -15 193 33 909 172 13 79 chr5 199497269 199497496 -132654 + MLT1B LTR MaLR 8 219 -171 378 0 0 0 chr5 199497504 199497546 -132604 + (TG)n Simple_repeat Simple_repeat 2 43 0 1319 226 0 11 chr5 199497546 199497833 -132317 - AluJo SINE Alu -18 284 1 463 255 38 72 chr5 199497895 199498130 -132020 + L1ME LINE L1 5321 5547 -617 836 176 7 0 chr5 199498515 199498657 -131493 - FRAM SINE Alu -7 169 27 640 14 0 0 chr5 199498789 199498862 -131288 + tRNA-Val-GTT tRNA tRNA 1 73 -3 502 146 0 0 chr5 199499199 199499281 -130869 - tRNA-Leu-CTT tRNA tRNA -3 82 1 2561 50 3 0 chr5 199499600 199499900 -130250 + AluY SINE Alu 1 301 -10 2559 50 3 0 chr5 199500457 199500758 -129392 + AluY SINE Alu 1 302 -9 360 0 0 0 chr5 199500776 199500816 -129334 + (T)n Simple_repeat Simple_repeat 1 40 0 937 237 95 6 chr5 199500955 199501271 -128879 - L1M4 LINE L1 -955 5191 4848 2123 130 0 0 chr5 199501281 199501580 -128570 + AluSx SINE Alu 12 310 -2 299 226 35 35 chr5 199501590 199501705 -128445 + L1M4 LINE L1 5219 5333 -813 * 300 265 0 10 chr5 199501681 199501779 -128371 + L1MB4 LINE L1 3862 3958 -2188 418 104 39 26 chr5 199501784 199501861 -128289 + AluS SINE Alu 2 79 -234 4282 187 26 10 chr5 199501913 199502061 -128089 + L1MB4 LINE L1 5176 5320 -860 2241 120 0 0 chr5 199502061 199502361 -127789 + AluSx SINE Alu 7 306 -6 4282 187 26 10 chr5 199502361 199503195 -126955 + L1MB4 LINE L1 5320 6174 -6 742 199 22 0 chr5 199503200 199503381 -126769 + L1MD2 LINE L1 5296 5480 -762 493 231 9 0 chr5 199503384 199503492 -126658 + FLAM_A SINE Alu 1 109 -33 2219 262 66 15 chr5 199503554 199504357 -125793 + L1MD2 LINE L1 5474 6346 -13 677 183 0 36 chr5 199504404 199504541 -125609 - FLAM_C SINE Alu 0 133 2 180 111 0 0 chr5 199504546 199504573 -125577 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 403 213 55 102 chr5 199504664 199504912 -125238 + L1M4 LINE L1 5315 5480 -684 640 14 0 0 chr5 199505117 199505190 -124960 + tRNA-Val-GTT tRNA tRNA 1 73 -3 658 298 24 20 chr5 199506605 199506853 -123297 - L1ME1 LINE L1 -5 6161 5913 792 184 14 60 chr5 199506896 199507045 -123105 + L1M4 LINE L1 5592 5729 -455 1859 167 7 3 chr5 199507045 199507344 -122806 + AluJo SINE Alu 1 300 -12 792 184 14 60 chr5 199507344 199507412 -122738 + L1M4 LINE L1 5729 5799 -385 303 167 0 115 chr5 199507417 199507525 -122625 - AluJ/FRAM SINE Alu 0 312 214 803 158 0 0 chr5 199507546 199507679 -122471 - FLAM_C SINE Alu 0 133 1 592 264 13 38 chr5 199507725 199507960 -122190 + L1ME LINE L1 4829 5057 -1089 1584 194 10 13 chr5 199507963 199508267 -121883 - AluJb SINE Alu -9 303 1 217 194 16 16 chr5 199508269 199508331 -121819 + (TTTG)n Simple_repeat Simple_repeat 2 63 0 523 248 53 49 chr5 199508333 199508559 -121591 + L1ME LINE L1 5321 5547 -617 806 196 7 0 chr5 199508876 199509024 -121126 - AluJb SINE Alu -1 311 163 667 0 0 0 chr5 199509156 199509231 -120919 + tRNA-Val-GTG tRNA tRNA 1 75 -1 695 12 0 0 chr5 199509550 199509632 -120518 - tRNA-Leu-CTT tRNA tRNA -3 82 1 2159 82 19 0 chr5 199509997 199510265 -119885 - AluSg SINE Alu -37 273 1 493 211 26 9 chr5 199510295 199510409 -119741 - L1M4 LINE L1 -1286 4860 4745 487 100 22 0 chr5 199510519 199510609 -119541 + AluY SINE Alu 219 310 -1 591 91 0 0 chr5 199510633 199510710 -119440 - AluJ/FLAM SINE Alu -233 79 3 849 232 103 34 chr5 199510713 199510911 -119239 - L1M4 LINE L1 -1885 4261 4078 3588 126 23 56 chr5 199510911 199510984 -119166 - MER41B LTR ERV1 0 635 561 1984 118 0 25 chr5 199510984 199511264 -118886 + AluSq SINE Alu 21 293 -20 3588 126 23 56 chr5 199511264 199511313 -118837 - MER41B LTR ERV1 -74 561 512 2731 35 3 6 chr5 199511313 199511626 -118524 + AluSx SINE Alu 1 312 0 3588 126 23 56 chr5 199511626 199512159 -117991 - MER41B LTR ERV1 -123 512 1 849 232 103 34 chr5 199512159 199512309 -117841 - L1M4 LINE L1 -2068 4078 3889 595 176 0 42 chr5 199512313 199512455 -117695 + L1MA9 LINE L1 5983 6118 -194 1210 89 0 6 chr5 199512462 199512620 -117530 + AluSg/x SINE Alu 149 305 -7 441 324 111 0 chr5 199512869 199513113 -117037 + MER90 LTR ERV1 11 281 -294 779 143 0 15 chr5 199513126 199513259 -116891 + FLAM_C SINE Alu 2 132 -1 1556 46 73 9 chr5 199513272 199513491 -116659 + MER11A LTR ERVK 2 234 -1032 2573 38 0 0 chr5 199513491 199513818 -116332 - AluY SINE Alu 0 327 1 2030 72 92 4 chr5 199514141 199514441 -115709 + AluSx SINE Alu 1 323 0 708 162 117 7 chr5 199514513 199514667 -115483 + MER58 DNA MER1_type 5 175 -166 243 241 19 0 chr5 199515142 199515196 -114954 - Tigger3(Golem) DNA MER2_type 0 3029 2975 602 227 23 0 chr5 199515266 199515394 -114756 - Tigger3(Golem) DNA MER2_type -2896 133 3 671 239 43 24 chr5 199515742 199515951 -114199 - MLT1A2 LTR MaLR -3 371 159 2424 99 0 3 chr5 199516423 199516727 -113423 - AluSq SINE Alu -10 303 1 301 137 98 0 chr5 199516754 199516805 -113345 - Charlie4 DNA MER1_type -23 1938 1883 1683 174 0 16 chr5 199516806 199517111 -113039 - AluJo SINE Alu -1 311 12 358 216 0 72 chr5 199517120 199517217 -112933 - Charlie4 DNA MER1_type -1687 274 185 567 205 0 0 chr5 199517217 199517344 -112806 - AluJb SINE Alu -6 306 180 368 301 75 0 chr5 199517346 199517492 -112658 - Charlie4 DNA MER1_type -1769 192 36 627 190 0 36 chr5 199517985 199518122 -112028 - FLAM_C SINE Alu -10 133 2 1345 196 11 29 chr5 199518218 199518493 -111657 + AluJo SINE Alu 39 308 -4 324 285 8 0 chr5 199518791 199518931 -111219 + L1M2 LINE L1 5677 5818 -487 1991 67 27 106 chr5 199518943 199519272 -110878 + AluYb8 SINE Alu 1 303 -15 2391 53 0 3 chr5 199520089 199520427 -109723 + AluY SINE Alu 1 337 0 1679 166 61 0 chr5 199520436 199520714 -109436 + AluJb SINE Alu 1 295 -17 481 191 0 0 chr5 199520752 199520846 -109304 + FLAM_A SINE Alu 1 94 -48 24 0 0 0 chr5 199520879 199520903 -109247 + AT_rich Low_complexity Low_complexity 1 24 0 1083 224 106 7 chr5 199521426 199521996 -108154 + MLT1E1 LTR MaLR 1 593 0 882 247 36 104 chr5 199522025 199522567 -107583 - L1ME3A LINE L1 -10 6154 5657 1263 148 86 0 chr5 199522604 199522813 -107337 - AluJb SINE Alu -1 311 85 226 197 0 30 chr5 199522815 199522881 -107269 + T-rich Low_complexity Low_complexity 2 65 0 701 0 0 0 chr5 199523155 199523237 -106913 + tRNA-Leu-CTT tRNA tRNA 1 82 -3 2389 61 6 26 chr5 199523548 199523861 -106289 + AluSp SINE Alu 1 307 -6 651 0 0 0 chr5 199523871 199523944 -106206 - tRNA-Val-GTT tRNA tRNA -3 73 1 618 0 0 0 chr5 199524311 199524383 -105767 - tRNA-Pro-CCA tRNA tRNA -3 72 1 603 27 0 0 chr5 199527144 199527217 -102933 - tRNA-Thr-ACA tRNA tRNA -3 73 1 796 153 0 15 chr5 199529718 199529849 -100301 + FLAM_C SINE Alu 4 132 -1 658 216 81 58 chr5 199531400 199531559 -98591 + L1MC5 LINE L1 7609 7763 -198 2225 86 0 25 chr5 199531559 199531874 -98276 + AluY SINE Alu 1 307 -4 1465 175 10 49 chr5 199531883 199532191 -97959 + AluSx SINE Alu 1 296 -16 658 216 81 58 chr5 199532191 199532331 -97819 + L1MC5 LINE L1 7770 7925 -36 1543 167 45 7 chr5 199532336 199532624 -97526 + AluJo SINE Alu 1 299 -13 434 287 125 33 chr5 199532757 199533137 -97013 - L2 LINE L2 -212 3101 2701 367 262 119 0 chr5 199534956 199535082 -95068 - MER112 DNA MER1_type -32 228 88 265 347 20 0 chr5 199536398 199536496 -93654 - MIR SINE MIR -51 211 112 1052 147 21 31 chr5 199536590 199536781 -93369 - MER20 DNA MER1_type 0 219 31 1046 148 148 95 chr5 199536932 199537215 -92935 + AluJo SINE Alu 15 312 0 2257 101 3 0 chr5 199537630 199537937 -92213 - AluSp SINE Alu -5 308 1 2324 59 10 3 chr5 199538018 199538321 -91829 - AluY SINE Alu -6 305 1 510 218 98 17 chr5 199538591 199538732 -91418 + MER46C DNA MER2_type 86 245 -93 450 281 39 0 chr5 199538732 199538860 -91290 - MER94 DNA DNA -1 133 1 510 218 98 17 chr5 199538860 199538892 -91258 + MER46C DNA MER2_type 245 273 -65 252 0 0 0 chr5 199541212 199541240 -88910 + (CA)n Simple_repeat Simple_repeat 1 28 0 304 315 140 25 chr5 199541273 199541837 -88313 + L2 LINE L2 1771 3267 -5 648 14 0 0 chr5 199542319 199542391 -87759 + tRNA-Ala-GCG tRNA tRNA 1 72 -3 1995 97 0 0 chr5 199542579 199542846 -87304 + AluSg SINE Alu 1 267 -43 671 13 0 0 chr5 199543198 199543274 -86876 + tRNA-Lys-AAG tRNA tRNA 1 76 0 2402 164 65 82 chr5 199543444 199544080 -86070 - L1MB3 LINE L1 -4 6179 5555 2308 48 10 26 chr5 199544106 199544415 -85735 + AluY SINE Alu 1 304 -7 1812 91 113 7 chr5 199544423 199544698 -85452 + AluSg1 SINE Alu 1 304 -5 1113 108 0 0 chr5 199544698 199544856 -85294 + AluSg/x SINE Alu 139 296 -16 2431 38 0 16 chr5 199544856 199545169 -84981 + AluY SINE Alu 1 308 -3 535 138 181 35 chr5 199545175 199545291 -84859 + FLAM_C SINE Alu 1 133 0 1986 83 14 7 chr5 199545430 199545707 -84443 - AluSx SINE Alu -33 279 1 1686 163 30 3 chr5 199545707 199546002 -84148 - AluSx SINE Alu -9 303 1 2171 79 3 26 chr5 199546076 199546380 -83770 - AluSp SINE Alu -16 297 1 790 276 30 33 chr5 199546380 199546746 -83404 - L1MC4a LINE L1 -1944 5864 5500 358 343 56 27 chr5 199548525 199548863 -81287 + L2 LINE L2 2899 3246 -67 236 307 27 0 chr5 199548891 199548966 -81184 + MIR SINE MIR 150 226 -36 488 197 51 73 chr5 199548968 199549105 -81045 + FLAM_A SINE Alu 9 142 0 278 319 17 0 chr5 199549275 199549391 -80759 + L1MC5 LINE L1 7773 7890 -71 1341 187 0 109 chr5 199549393 199549714 -80436 - AluJb SINE Alu -16 286 1 180 0 0 0 chr5 199549789 199549809 -80341 + (A)n Simple_repeat Simple_repeat 1 20 0 1883 109 18 0 chr5 199549809 199550103 -80047 + AluSg SINE Alu 1 299 0 326 320 46 57 chr5 199550339 199550514 -79636 + L1MC4 LINE L1 6896 7068 -974 240 254 28 14 chr5 199550536 199550607 -79543 + AluJ/FLAM SINE Alu 2 73 -229 398 325 79 65 chr5 199550625 199551223 -78927 + L1MC5 LINE L1 4193 7927 -34 200 59 78 0 chr5 199551223 199551274 -78876 + (TA)n Simple_repeat Simple_repeat 1 55 0 1969 90 10 17 chr5 199551366 199551654 -78496 - AluSq SINE Alu -27 286 1 884 157 235 55 chr5 199552297 199552457 -77693 - AluJo SINE Alu -1 301 171 191 35 0 35 chr5 199552457 199552486 -77664 + (CGGGGG)n Simple_repeat Simple_repeat 3 30 0 884 157 235 55 chr5 199552486 199552580 -77570 - AluJo SINE Alu -131 171 1 197 171 0 0 chr5 199553162 199553197 -76953 + MIR SINE MIR 105 139 -123 674 14 0 0 chr5 199553641 199553714 -76436 - tRNA-Val-GTT tRNA tRNA -3 73 1 2286 48 16 19 chr5 199553919 199554231 -75919 + AluY SINE Alu 1 311 0 243 150 0 0 chr5 199554338 199554378 -75772 - Zaphod DNA AcHobo -402 3629 3590 * 946 201 82 50 chr5 199554377 199554816 -75334 - Zaphod DNA AcHobo -3047 984 532 199 275 121 0 chr5 199554933 199555024 -75126 + L2 LINE L2 1882 1983 -1331 2194 92 13 0 chr5 199556236 199556541 -73609 + AluSc SINE Alu 1 309 0 542 172 0 40 chr5 199556565 199556664 -73486 - AluJ/FLAM SINE Alu -210 102 8 230 328 0 0 chr5 199556814 199556881 -73269 - tRNA-Glu-GAG tRNA tRNA -3 72 6 667 0 0 0 chr5 199557350 199557423 -72727 - tRNA-Lys-AAG tRNA tRNA -3 73 1 694 0 0 0 chr5 199557765 199557839 -72311 - tRNA-Val-GTG tRNA tRNA -2 74 1 240 122 0 0 chr5 199559555 199559596 -70554 + (GGA)n Simple_repeat Simple_repeat 1 41 0 215 167 0 42 chr5 199559792 199559864 -70286 + GA-rich Low_complexity Low_complexity 1 69 0 516 301 21 16 chr5 199560816 199561002 -69148 - MIR SINE MIR -2 260 74 2137 123 0 0 chr5 199561476 199561778 -68372 - AluSx SINE Alu -10 302 1 268 295 53 11 chr5 199561781 199561876 -68274 - MER5B DNA MER1_type 0 178 80 2241 109 6 3 chr5 199562234 199562545 -67605 - AluSp SINE Alu -1 312 1 2290 78 3 3 chr5 199562714 199563021 -67129 - AluY SINE Alu -4 307 1 1362 167 61 19 chr5 199563160 199563424 -66726 - AluJo SINE Alu -13 299 25 1323 69 0 12 chr5 199563452 199563625 -66525 + AluY SINE Alu 129 299 -12 2243 104 7 3 chr5 199563650 199563959 -66191 + AluSx SINE Alu 1 310 -2 2184 109 3 0 chr5 199564027 199564331 -65819 + AluSx SINE Alu 3 307 -5 238 222 0 0 chr5 199564603 199564648 -65502 - L2 LINE L2 -16 3256 3212 2278 82 0 19 chr5 199565584 199565899 -64251 + AluSc SINE Alu 1 309 0 528 101 9 55 chr5 199567292 199567401 -62749 + MER58 DNA MER1_type 2306 2409 -11 462 313 61 74 chr5 199567501 199567827 -62323 - L2 LINE L2 0 3272 2951 226 214 0 0 chr5 199568734 199568776 -61374 + CT-rich Low_complexity Low_complexity 2 43 0 602 197 16 33 chr5 199572490 199572612 -57538 - FRAM SINE Alu -23 153 34 798 241 41 5 chr5 199573178 199573373 -56777 + MER20 DNA MER1_type 17 218 -1 2150 101 20 0 chr5 199573895 199574201 -55949 + AluSx SINE Alu 1 312 0 1782 146 24 7 chr5 199575142 199575429 -54721 + AluSq SINE Alu 1 292 -21 2202 96 7 0 chr5 199575446 199575739 -54411 + AluY SINE Alu 1 295 -16 1308 79 0 0 chr5 199575751 199575916 -54234 + AluSx SINE Alu 1 165 -147 604 148 56 19 chr5 199576079 199576187 -53963 - FLAM_C SINE Alu -18 125 14 2091 92 31 0 chr5 199576219 199576512 -53638 + AluSp SINE Alu 1 302 -11 1829 119 17 7 chr5 199576527 199576821 -53329 + AluSx SINE Alu 9 305 -7 1859 108 27 30 chr5 199577935 199578231 -51919 - AluSx SINE Alu -17 295 1 2081 107 0 30 chr5 199579866 199580166 -49984 + AluSx SINE Alu 3 293 -19 283 242 50 61 chr5 199580656 199580755 -49395 + MIR SINE MIR 125 222 -40 318 258 0 0 chr5 199580772 199580838 -49312 - L2 LINE L2 -23 3249 3184 181 282 59 12 chr5 199580970 199581055 -49095 - L2 LINE L2 -336 2977 2889 210 188 0 42 chr5 199581821 199581869 -48281 + (CCCCG)n Simple_repeat Simple_repeat 5 50 0 24 0 0 0 chr5 199582352 199582376 -47774 + GC_rich Low_complexity Low_complexity 1 24 0 2691 14 10 0 chr5 199582783 199583079 -47071 + AluY SINE Alu 1 299 -12 282 265 105 45 chr5 199583452 199583652 -46498 + L2 LINE L2 2856 3067 -205 232 186 51 34 chr5 199583843 199583902 -46248 - L2 LINE L2 -332 2981 2922 2164 108 3 3 chr5 199584111 199584408 -45742 + AluY SINE Alu 1 297 -14 1897 142 32 7 chr5 199584791 199585072 -45078 + AluJo SINE Alu 13 300 -12 1353 125 67 5 chr5 199585206 199585414 -44736 - AluSg/x SINE Alu -9 301 81 2402 108 0 0 chr5 199585632 199585937 -44213 + AluSx SINE Alu 1 305 -7 1924 136 23 23 chr5 199586386 199586687 -43463 + AluSq SINE Alu 1 301 -12 21 0 0 0 chr5 199587515 199587536 -42614 + AT_rich Low_complexity Low_complexity 1 21 0 802 179 61 41 chr5 199587680 199587876 -42274 - MER3 DNA MER1_type 0 209 10 2350 90 0 3 chr5 199588414 199588713 -41437 - AluY SINE Alu -13 298 1 943 108 8 0 chr5 199590411 199590541 -39609 - AluY SINE Alu -15 296 166 2267 97 0 0 chr5 199591751 199592069 -38081 + AluSc SINE Alu 3 309 0 2164 114 7 0 chr5 199592149 199592439 -37711 + AluSx SINE Alu 1 292 -20 460 212 133 24 chr5 199592728 199592893 -37257 + MER112 DNA MER1_type 18 200 -60 283 270 200 0 chr5 199593301 199593401 -36749 - MIR SINE MIR -136 126 7 234 180 0 0 chr5 199594644 199594705 -35445 + CT-rich Low_complexity Low_complexity 3 63 0 22 0 0 0 chr5 199595259 199595281 -34869 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 199595598 199595619 -34531 + GC_rich Low_complexity Low_complexity 1 21 0 2263 43 7 25 chr5 199596250 199596529 -33621 - AluY SINE Alu -7 304 31 632 217 0 0 chr5 199596899 199597014 -33136 - AluSc SINE Alu -63 246 132 1039 191 0 6 chr5 199597014 199597187 -32963 - FAM SINE Alu -1 174 3 1783 162 19 29 chr5 199597196 199597504 -32646 - AluJo SINE Alu -7 305 1 472 274 91 0 chr5 199597522 199597719 -32431 + MER112 DNA MER1_type 15 229 -31 391 328 8 17 chr5 199597803 199597922 -32228 + L2 LINE L2 3154 3271 -1 1575 193 7 30 chr5 199598165 199598305 -31845 + AluJb SINE Alu 1 143 -169 2236 112 10 13 chr5 199598305 199598618 -31532 + AluSx SINE Alu 1 312 0 1575 193 7 30 chr5 199598618 199598778 -31372 + AluJb SINE Alu 143 294 -18 2514 69 7 0 chr5 199598782 199599086 -31064 + AluY SINE Alu 1 306 -5 1032 272 116 19 chr5 199600156 199600682 -29468 + L1ME3A LINE L1 5580 6156 -14 365 210 32 127 chr5 199600856 199600906 -29244 + LTR8 LTR ERV1 3 56 -635 7002 104 14 10 chr5 199600906 199601871 -28279 - LTR5 LTR ERVK 0 969 1 365 210 32 127 chr5 199601871 199601977 -28173 + LTR8 LTR ERV1 56 144 -547 2223 116 0 6 chr5 199602188 199602499 -27651 + AluSg SINE Alu 1 309 -1 228 135 0 0 chr5 199602607 199602644 -27506 + L1MC4 LINE L1 7459 7495 -547 * 311 296 73 22 chr5 199602612 199602791 -27359 + L1MC5 LINE L1 7293 7480 -481 2623 40 0 3 chr5 199603075 199603371 -26779 - AluY SINE Alu -16 295 1 25 31 0 0 chr5 199603499 199603531 -26619 + AT_rich Low_complexity Low_complexity 1 32 0 329 244 236 0 chr5 199603604 199603727 -26423 + L1ME4a LINE L1 5969 6120 -1 332 228 30 34 chr5 199603973 199604070 -26080 - L1MC4 LINE L1 -1339 6983 1995 1800 104 114 11 chr5 199604670 199604950 -25200 + AluSg SINE Alu 1 309 -1 230 227 45 34 chr5 199605466 199605554 -24596 + MER45R DNA AcHobo 1353 1441 -140 2156 108 7 3 chr5 199605554 199605851 -24299 - AluSc SINE Alu -11 298 1 2516 51 6 13 chr5 199606737 199607050 -23100 + AluY SINE Alu 1 311 0 1606 173 7 49 chr5 199607077 199607384 -22766 + AluSx SINE Alu 1 294 -18 1410 269 24 15 chr5 199607384 199607793 -22357 - MER21B LTR ERV1 -432 431 19 326 212 10 91 chr5 199607791 199607890 -22260 - MER21B LTR ERV1 -757 106 16 * 1137 186 0 117 chr5 199607890 199608180 -21970 - AluJb SINE Alu -13 299 44 493 217 0 0 chr5 199608182 199608265 -21885 - FLAM_A SINE Alu -25 117 35 2179 150 67 24 chr5 199608547 199608968 -21182 + MER1A DNA MER1_type 1 439 -90 670 236 57 6 chr5 199609222 199609379 -20771 - AluJo SINE Alu -139 173 9 1064 197 0 5 chr5 199609958 199610151 -19999 - AluJb SINE Alu -4 308 117 373 216 39 49 chr5 199610151 199610253 -19897 - MER8 DNA MER2_type -136 103 3 1711 173 0 13 chr5 199610364 199610664 -19486 + AluJo SINE Alu 1 296 -16 482 227 7 71 chr5 199610900 199611041 -19109 + AluJo SINE Alu 11 142 -170 251 264 11 22 chr5 199611041 199611132 -19018 - L1ME LINE L1 -558 5563 5474 1411 204 42 11 chr5 199611257 199611541 -18609 - AluJb SINE Alu -19 293 1 375 203 0 135 chr5 199611544 199611692 -18458 + LTR41 LTR ERVL 640 767 -6 2300 141 67 19 chr5 199611963 199612382 -17768 + MER1A DNA MER1_type 1 439 -90 2208 110 0 0 chr5 199616738 199617037 -13113 + AluSg SINE Alu 1 299 -11 458 155 0 0 chr5 199620118 199620202 -9948 - AluSq SINE Alu 0 313 230 937 154 20 7 chr5 199620204 199620353 -9797 - AluSq SINE Alu -161 151 1 905 247 24 17 chr5 199620356 199620791 -9359 - L1M2 LINE L1 -4226 2563 2036 2152 127 3 22 chr5 199620791 199621106 -9044 - AluSg SINE Alu -1 309 1 905 247 24 17 chr5 199621106 199621198 -8952 - L1M2 LINE L1 -4753 2036 1946 707 158 0 0 chr5 199621213 199621314 -8836 - FLAM_C SINE Alu -40 103 3 729 153 0 0 chr5 199621316 199621427 -8723 + FLAM_C SINE Alu 27 137 -6 1622 91 4 78 chr5 199621429 199621672 -8478 + AluSx SINE Alu 37 261 -51 271 298 38 76 chr5 199622131 199622256 -7894 + L2 LINE L2 3084 3197 -116 2275 113 0 0 chr5 199622256 199622556 -7594 + AluSq SINE Alu 1 300 -13 271 298 38 76 chr5 199622556 199622668 -7482 + L2 LINE L2 3197 3312 -1 1996 133 0 0 chr5 199623100 199623370 -6780 + AluSx SINE Alu 1 270 -42 359 246 109 36 chr5 199623494 199623604 -6546 + L2 LINE L2 3195 3312 -1 21 36 0 0 chr5 199623991 199624019 -6131 + AT_rich Low_complexity Low_complexity 1 28 0 1936 215 151 29 chr5 199624146 199624915 -5235 - L1M4c LINE L1 -4071 2313 1451 723 144 8 0 chr5 199624916 199625048 -5102 - L1MA5 LINE L1 0 6300 6168 385 259 94 118 chr5 199625153 199625652 -4498 - L1M4 LINE L1 -2752 3394 2807 1872 169 17 3 chr5 199626356 199626657 -3493 - AluJb SINE Alu -7 305 1 463 384 32 24 chr5 199626820 199627379 -2771 - L2 LINE L2 -2 3270 2707 277 342 0 0 chr5 199627377 199627456 -2694 - L2 LINE L2 0 3272 3194 * 360 278 0 63 chr5 199627569 199627760 -2390 + GA-rich Low_complexity Low_complexity 1 179 0 419 198 23 28 chr5 199627764 199627941 -2209 + G-rich Low_complexity Low_complexity 4 179 0 359 254 22 30 chr5 199627967 199628387 -1763 + GA-rich Low_complexity Low_complexity 1 416 0 192 200 0 0 chr5 199628393 199628433 -1717 + G-rich Low_complexity Low_complexity 5 44 0 453 103 21 31 chr5 199628562 199628659 -1491 - L1MA5 LINE L1 -5 6295 6200 317 274 0 47 chr5 199628696 199628802 -1348 + L1MC4 LINE L1 6610 6710 -1332 29 28 0 0 chr5 199630114 199630150 0 + AT_rich Low_complexity Low_complexity 1 36 0